level_0 Raw file Scan number Retention time Ion injection time Total ion current Collision energy Summations Base peak intensity Elapsed time Identified Matched Reverse MS/MS IDs Sequence Length Filtered peaks m/z Mass Charge MS2 m/z Type Fragmentation Mass analyzer Parent intensity fraction Fraction of total spectrum Base peak fraction Precursor full scan number Precursor intensity Precursor apex fraction Precursor apex offset Precursor apex offset time Scan event number Modifications Modified sequence Proteins Score PEP Experiment MS3 scan numbers Reporter PIF Reporter fraction DN sequence DN length DN min levenshtein distance DN extension sequence DN extended DN complete DN raw score DN extension score DN extension norm. score DN normalized score DN complete score DN combined score DN nterm mass DN cterm mass DN missing mass DN nterm delta score DN cterm delta score DN term delta score DN full length delta score DN protease score DN complement score DN A2 score DN water loss score DN ammonia loss score DN agrees with andromeda DN agrees with andromeda complete DN all sequences DN all scores DN all agrees DN any agrees DN number of steps DN is dominantly y Intens Comp Factor CTCD Comp RawOvFtT AGC Fill Scan index MS scan index MS scan number uid uid_seq Identified_vanilla Identified_rescore tesorai_sequence tesorai_rt tesorai_pre_mz tesorai_pre_intensity tesorai_pre_scan tesorai_proteins tesorai_score tesorai_charge same_seq tesorai_length Tesorai final_identity PXD020620_cell_line DOHH2_400M_050219_1 220 0.89402 800.0 34360.0 25 0 5169.7 -1 SCCPCCCCCGC 11 65 381.0792419314384 0 381.0792419314384 PEAK CID FTMS 0 0 0 -1 0 1 Carbamidomethyl (C) _SC(Carbamidomethyl (C))CPCCCCCGC_ ENSG00000183307|ENST00000331437|TMEM121B 0.0 0.4761840153648598 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.399 28552.5 0.3400000035762787 0 218 219 DOHH2_400M_050219_1,220 DOHH2_400M_050219_1,220,SCCPCCCCCGC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 417 1.6958 800.0 84360.0 25 0 34303.0 + 13107 HERERRYQE 9 44 434.8822109946424 0 434.8824035525322 PEAK CID FTMS 0 0 0 416 124048.3515625 0.8733088573628278 52 -0.2212964296340942 1 Unmodified _HERERRYQE_ REV__ENSG00000213760|ENST00000303892|ATP6V1G2;REV__ENST00000475917.1_1_6:31510065-31514336:-|nuORF;REV__ENST00000481998.1_1_6:31513879-31514336:-|nuORF;REV__nc|ENSG00000213760|O95670-3|ATP6V1G2 0.5247636613948944 0.3444685223463735 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.399 60671.1 0.4000000059604645 1 414 416 DOHH2_400M_050219_1,417 DOHH2_400M_050219_1,417,HERERRYQE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1192 4.8221 800.0 73430.0 25 0 30087.0 -1 TKMMLLLYEE 10 55 434.8821991476679 0 434.8822814822197 PEAK CID FTMS 0 0 0 1191 82054.296875 0.5404362802370213 157 -0.6439938545227051 1 2 Oxidation (M) _TKM(Oxidation (M))M(Oxidation (M))LLLYEE_ ENSG00000042088|ENST00000335725|TDP1 0.0 0.3961065659209837 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.399 52094.4 0.949999988079071 2 1188 1191 DOHH2_400M_050219_1,1192 DOHH2_400M_050219_1,1192,TKMMLLLYEE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 1522 6.1582 800.0 106410.0 25 0 41470.0 20510 LLLLLWLA 8 49 477.8229742729703 0 477.8232910037041 PEAK CID FTMS 0 0 0 1521 86475.453125 0.6442130315102145 -57 0.2296400070190429 1 Unmodified _LLLLLWLA_ ENSG00000129467|ENST00000418030|ADCY4;ENST00000545213.5_1_14:24789074-24794639:-|nuORF;ENST00000554577.5_1_14:24791640-24799178:-|nuORF;REV__ENSG00000077147|ENST00000371142|TM9SF3 0.0 0.6010389664953673 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.399 68739.7 0.9800000190734864 3 1517 1521 DOHH2_400M_050219_1,1522 DOHH2_400M_050219_1,1522,LLLLLWLA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1841 7.4459 539.0 382900.0 25 0 60411.0 + 11958 GPEAGRKPA 9 98 441.7433195026465 881.472086072093 2 441.7430602908134 MULTI CID FTMS 0 0 0 1840 274853.1875 0.0772335527773935 -4 0.0162396430969238 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 96.36657018975838 0.0123932121270252 1 GPEAGRKAP 9 2 + 93.968 0.0 0.0 10.66 10.66 96.977 0.0 0.0 0.0 41.3999595469041 8.16061246681059 8.16061246681059 14.532796692927263 0 2.1307196863200843 2.0 0.5 0.6549471895720984 GPEAGRKAP;GPEQRKAP;[PG]EAGRKPA;[PG]EA[RK]GPA;[EP]GAGRKPA;[EP]GA[RK]GPA;ADPAGRKAP;[PG]TA[RV]GGPA;[PG]T[RV]AGGPA;[PG]T[RV]QGPA 10.66;9.0117;8.3118;8.1186;6.6057;6.4125;6.1191;5.7629;5.4214;5.3634 -;-;+;-;-;-;-;-;-;- + 1211 + 1 1.399 162384.5 1.0 4 1835 1840 DOHH2_400M_050219_1,1841 DOHH2_400M_050219_1,1841,GPEAGRKPA True True GPEAGRKPA 7.4459294 441.743060290813 48198735.0 1840.0 nc|ENSG00000204469|P48634-3|PRRC2A;;ENSG00000204469|ENST00000376033|PRRC2A;;nc|ENSG00000204469|P48634-2|PRRC2A 6.275455315907796 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 1842 7.4598 800.0 156890.0 25 0 2304.9 -1 0 75 804.1550833095083 4015.739034214541 5 804.5580932497978 MULTI CID FTMS 0 0 0 1840 62612.734375 0.1226707807388003 -4 0.0162396430969238 2 1 HR[MD] 4 -1 13.416 0.0 0.0 0.33409 0.0 0.0 3458.508044036273 0.0 3458.508044036273 0.0 2.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.5 HR[MD] 0.33409 - 45 1 1.399 94908.0 0.2800000011920929 5 1835 1840 DOHH2_400M_050219_1,1842 DOHH2_400M_050219_1,1842, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1845 7.4698 175.0 279590.0 25 0 13510.0 + -1 GADAMAEVFNA 11 95 556.2415187717045 1110.4684846102089 2 556.2424194216728 MULTI CID FTMS 0 0 0 1844 279193.03125 0.9518046322797922 -3 0.0339517593383789 1 Oxidation (M) _GADAM(Oxidation (M))AEVFNA_ REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1 26.268140514670165 0.4754186812857754 1 [AG]DAHEAQQ{[QG]|[NA]} 11 -1 + 65.556 0.0 0.0 5.9034 5.9034 80.3 0.0 0.0 0.0 8.798119866192295 7.367585652254199 7.367585652254199 2.715752168950182 0 0.3807196863200844 2.0 1.1861818737241734 0.0 [AG]DAHEAQQ{[QG]|[NA]};[AG]ADHEAQQ{[QG]|[NA]};[AG]AHDEAQQ{[QG]|[NA]};[AG]GEHEAQQ{[QG]|[NA]};{[DA]|[EG]}QHEAQQ{[QG]|[NA]};[AG]DAHEAQ[AG]{[QG]|[NA]};[AG]DAHEA[AG]Q{[QG]|[NA]};{[DA]|[EG]}GAHEAQQ{[QG]|[NA]};{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQ{[QG]|[NA]};[AG]ADHEA[AG]Q{[QG]|[NA]} 5.9034;5.6589;5.5871;5.4821;5.1111;5.0814;5.0814;4.9617;4.8658;4.8368 -;-;-;-;-;-;-;-;-;- 828 1 1.399 42564.0 1.0 6 1837 1844 DOHH2_400M_050219_1,1845 DOHH2_400M_050219_1,1845,GADAMAEVFNA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1846 7.4744 248.0 245260.0 25 0 27570.0 -1 PSSLSRMK 8 90 461.245001684982 920.475450436764 2 461.2447082400322 MULTI CID FTMS 0 0 0 1844 161905.8125 1.0 0 0.0 2 Oxidation (M) _PSSLSRM(Oxidation (M))K_ ENSG00000108506|ENST00000251334|INTS2;nc|ENSG00000108506|Q9H0H0|INTS2 16.942295170755138 0.6606234159769251 1 {M(Oxidation (M))|F}K 2 -1 25.701 0.0 0.0 2.7922 0.0 0.0 627.3346250967235 0.0 627.3346250967235 0.0 14.107281392838829 0.0 0.0 0 0.5 0.0 0.0 0.2742275032520141 {M(Oxidation (M))|F}K 2.7922 + + 80 + 1 1.399 52596.4 1.0 7 1837 1844 DOHH2_400M_050219_1,1846 DOHH2_400M_050219_1,1846,PSSLSRMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 1847 7.4813 388.0 244750.0 25 0 20826.0 36471 TAARAAPA 8 153 364.7061804347237 727.3978079362473 2 364.7059814333916 MULTI CID FTMS 0 0 0 1844 127476.796875 1.0 0 0.0 3 Unmodified _TAARAAPA_ ENST00000464624.6_1_20:57428320-57466719:+|nuORF;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2-3|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS 8.593279151180031 0.7721714526254883 1 A 1 7 13.368 0.0 0.0 1.8378 0.0 0.0 638.3497865512849 0.0 638.3497865512849 0.0 0.8940705869557739 0.0 0.0 0 0.5 0.0 0.0 0.0 + A 1.8378 + + 67 + 1 1.399 76495.7 1.0 8 1837 1844 DOHH2_400M_050219_1,1847 DOHH2_400M_050219_1,1847,TAARAAPA False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_1 1848 7.4888 417.0 103080.0 25 0 5621.6 + 12016 GPTPSGRKD 9 89 457.7379203761454 913.4612878190908 2 457.7381774783134 MULTI CID FTMS 0 0 0 1844 113998.984375 1.0 0 0.0 4 Unmodified _GPTPSGRKD_ REV__ENSG00000143772|ENST00000429204|ITPKB;REV__ITPKB|p.N653Tfs*37|1|0.26|ENSG00000143772|chr1:226648746-226648746|T/-|frameshift_variant;REV__nc|ENSG00000143772|P27987-2|ITPKB 10.823927491677226 0.5436922275383211 1 [PG]ER 4 -1 25.713 0.0 0.0 2.8149 0.0 0.0 0.0 471.2254229111408 471.2254229111408 14.119543704721591 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [PG]ER 2.8149 - 119 1 1.399 38554.0 1.0 9 1837 1844 DOHH2_400M_050219_1,1848 DOHH2_400M_050219_1,1848,GPTPSGRKD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1849 7.5026 800.0 74810.0 25 0 3624.0 -1 0 59 1004.9417304513088 4015.7378159388354 4 1005.443286120892 MULTI CID FTMS 0 0 0 1844 103307.484375 0.5323644934936377 -2 0.0298914909362792 5 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.399 47971.8 0.4399999976158142 10 1837 1844 DOHH2_400M_050219_1,1849 DOHH2_400M_050219_1,1849, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1851 7.5203 800.0 124300.0 25 0 8992.3 + 17651 KPTGARPS 8 164 407.2307666665959 0 407.2321044802666 PEAK CID FTMS 0 0 0 1850 48156.51171875 0.5308570616566801 1 -0.0177350044250488 1 Unmodified _KPTGARPS_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 13.042465956692816 0.507358928091419 1 PTP 3 5 20.93 0.0 0.0 2.5762 0.0 0.0 128.09249896249167 386.1735628717407 514.2660618342323 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 PTP 2.5762 - 36 + 1 1.399 77018.2 0.3899999856948852 11 1838 1850 DOHH2_400M_050219_1,1851 DOHH2_400M_050219_1,1851,KPTGARPS False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 1854 7.5406 800.0 61467.0 25 0 1694.6 -1 0 63 815.5589512464682 4072.7583738993408 5 815.9614135622978 MULTI CID FTMS 0 0 0 1853 77393.5390625 0.8089674082357555 1 -0.057868480682373 1 1 GA[C(Carbamidomethyl (C))Q] 4 -1 16.198 0.0 0.0 0.39771 0.0 0.0 3638.553654283588 0.0 3638.553654283588 0.0 10.511525224473813 0.0 0.0 0 0.0 0.0 0.0 0.0 GA[C(Carbamidomethyl (C))Q] 0.39771 - 9 1 1.399 47005.6 0.4300000071525574 12 1840 1853 DOHH2_400M_050219_1,1854 DOHH2_400M_050219_1,1854, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1855 7.5544 800.0 64423.0 25 0 1942.4 -1 0 70 821.5619773820914 4102.773504577457 5 821.7626220583916 MULTI CID FTMS 0 0 0 1853 99340.4921875 1.0 0 0.0 2 1 H 1 -1 3.4949 0.0 0.0 0.085183 0.0 0.0 3145.383014930776 817.3232515924436 3962.70626652322 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.085183 - 5 + 1 1.399 44770.5 0.4300000071525574 13 1840 1853 DOHH2_400M_050219_1,1855 DOHH2_400M_050219_1,1855, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1856 7.5683 800.0 48409.0 25 0 1877.9 -1 0 44 831.5669394832325 4152.798315083162 5 831.7689086794853 MULTI CID FTMS 0 0 0 1853 86291.046875 1.0 0 0.0 3 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.399 35997.1 0.4099999964237213 14 1840 1853 DOHH2_400M_050219_1,1856 DOHH2_400M_050219_1,1856, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1857 7.5821 800.0 20891.0 25 0 1459.7 -1 0 42 781.3499916724282 3901.713576029141 5 781.5523559451103 MULTI CID FTMS 0 0 0 1853 81838.28125 1.0 0 0.0 4 1 R 1 -1 0.9691 0.0 0.0 0.024838 0.0 0.0 3037.343533159804 705.2651461236936 3742.6086792834976 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.024838 - 1 + 1 1.399 23222.5 0.4099999964237213 15 1840 1853 DOHH2_400M_050219_1,1857 DOHH2_400M_050219_1,1857, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1859 7.5985 800.0 45898.0 25 0 2564.9 -1 0 36 1019.4482729984604 2036.8819930637208 2 1019.702380359173 MULTI CID FTMS 0 0 0 1858 41773.71875 1.0 0 0.0 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.399 31008.7 0.3799999952316284 16 1841 1858 DOHH2_400M_050219_1,1859 DOHH2_400M_050219_1,1859, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1860 7.6123 800.0 48283.0 25 0 1855.8 -1 0 58 821.5619773820914 4102.773504577457 5 821.9625121951103 MULTI CID FTMS 0 0 0 1858 62152.42578125 0.6257740458010463 1 -0.0302162170410156 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.399 39977.5 0.3600000143051147 17 1841 1858 DOHH2_400M_050219_1,1860 DOHH2_400M_050219_1,1860, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1864 7.6308 450.0 173870.0 25 0 123540.0 + -1 GVNMVNMPNRV 11 38 631.8036713659012 0 631.8030273318291 PEAK CID FTMS 0 0 0 1863 177495.015625 0.0583872865514677 -337 1.5187177658081057 1 2 Oxidation (M) _GVNM(Oxidation (M))VNM(Oxidation (M))PNRV_ REV__ENST00000399070.3_2_18:32886564-32887857:+|nuORF 1.3295316138638542 0.4761840153648598 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.623 63686.3 1.0 18 1844 1863 DOHH2_400M_050219_1,1864 DOHH2_400M_050219_1,1864,GVNMVNMPNRV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1865 7.6447 800.0 30798.0 25 0 2180.7 -1 0 35 835.3706955663389 4171.817095498695 5 835.7711669802666 MULTI CID FTMS 0 0 0 1863 76663.03125 1.0 0 0.0 2 1 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.13147 0.0 0.0 2966.340851457482 1055.4121798151002 4021.753031272582 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.13147 - 3 + 1 2.623 27327.2 0.3799999952316284 19 1844 1863 DOHH2_400M_050219_1,1865 DOHH2_400M_050219_1,1865, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1872 7.6812 800.0 113870.0 25 0 65869.0 + -1 CSQRKECIY 9 58 614.7770485618581 0 614.7765991091728 PEAK CID FTMS 0 0 0 1871 99660.4296875 0.1757478448784188 -348 1.5835366249084473 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))CSQRKEC(Carbamidomethyl (C))IY_ REV__ENST00000589345.6_1_19:15962923-15965568:-|nuORF 2.059750862983233 0.3444685223463734 1 C 1 -1 1.2591 0.0 0.0 0.10257 0.0 0.0 995.491324441296 126.01949487857657 1121.5108193198726 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.10257 + + 1 + 1 2.623 72126.2 0.4799999892711639 20 1850 1871 DOHH2_400M_050219_1,1872 DOHH2_400M_050219_1,1872,CSQRKECIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1873 7.6898 490.0 169650.0 25 0 7277.7 + 36761 TEDDKRRNY 9 120 399.52680212577576 1195.5585769775273 3 399.5264770388603 MULTI CID FTMS 0 0 0 1871 84692.3203125 0.8135958386491116 -8 0.0524811744689941 2 Unmodified _TEDDKRRNY_ ENSG00000235162|ENST00000443585|C12orf75 21.59015148037692 0.2564810811560323 1 TEDDY 5 4 63.998 0.0 0.0 5.353 0.0 0.0 0.0 569.3278227684638 569.3278227684638 49.39387834276005 0.0 0.0 0.0 0 0.4802046884880938 1.6989700043360187 0.4247425010840047 0.0 TEDDY 5.353 - 65 + 1 2.623 67474.6 1.0 21 1850 1871 DOHH2_400M_050219_1,1873 DOHH2_400M_050219_1,1873,TEDDKRRNY False True TEDDKRRNY 7.6898341 399.52647703886 866792.0625 1871.0 ENSG00000235162|ENST00000443585|C12orf75 4.025519688924153 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 1876 7.6987 41.0 1221400.0 25 0 173860.0 + 11959 GPEAGRKPA 9 68 441.7433195026465 881.472086072093 2 441.7432433962822 MULTI CID FTMS 0 0 0 1875 1365285.875 0.3836443726272682 13 -0.1194949150085449 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 47.74868867922204 0.0453060283459952 1 GPEA 4 5 68.175 0.0 0.0 7.7343 0.0 0.0 0.0 524.2939206903626 524.2939206903626 47.2062251842808 0.0 0.0 0.0 0 1.424742501084005 2.0 0.5 0.0 + GPEA 7.7343 + + 31 + 1 2.623 46141.9 1.0 22 1852 1875 DOHH2_400M_050219_1,1876 DOHH2_400M_050219_1,1876,GPEAGRKPA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 1877 7.7086 566.0 216080.0 25 0 9491.3 -1 0 74 804.1550833095083 4015.739034214541 5 804.3561279177666 MULTI CID FTMS 0 0 0 1875 278054.34375 0.5734952350094241 12 -0.1154365539550781 2 1 TD{[{M(Oxidation (M))|F}D]|MM} 4 -1 11.159 0.0 0.0 0.27787 0.0 0.0 3519.530892184517 0.0 3519.530892184517 0.0 1.8669031833265133 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 TD{[{M(Oxidation (M))|F}D]|MM} 0.27787 - 32 1 2.623 89372.9 1.0 23 1852 1875 DOHH2_400M_050219_1,1877 DOHH2_400M_050219_1,1877, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1881 7.7288 553.0 89356.0 25 0 4037.3 + -1 GADAMAEVFNA 11 107 556.2415187717045 1110.4684846102089 2 556.2420532107353 MULTI CID FTMS 0 0 0 1880 98773.5625 0.3367316652330575 15 -0.1292824745178222 1 Oxidation (M) _GADAM(Oxidation (M))AEVFNA_ REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1 22.736283301280096 0.5583477779825423 1 [AG]DAHEAQQGQ 11 -1 + 71.867 0.0 0.0 6.4718 6.4718 85.208 0.0 0.0 0.0 5.488144793747367 8.164482558815223 5.488144793747367 5.488144793747367 0 0.5796896906561032 2.0 1.4258337024346173 0.0 [AG]DAHEAQQGQ;{[DA]|[EG]}GAHEAQQGQ;[AG]ADHEAQQGQ;{[DA]|[EG]}QHEAQQGQ;[AG]DAHEA[AG]QGQ;[AG]DAHEAQ[AG]GQ;[AG]AHDEAQQGQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQGQ;{[DA]|[EG]}GAHEAQ[AG]GQ;{[DA]|[EG]}GAHEA[AG]QGQ 6.4718;5.9775;5.9703;5.8098;5.6497;5.6497;5.4834;5.3068;5.1555;5.1555 -;-;-;-;-;-;-;-;-;- 593 1 2.623 41683.6 1.0 24 1855 1880 DOHH2_400M_050219_1,1881 DOHH2_400M_050219_1,1881,GADAMAEVFNA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1884 7.7491 800.0 35305.0 25 0 16470.0 + -1 YKLCFECMY 9 40 636.7588792217367 0 636.7590820193291 PEAK CID FTMS 0 0 0 1883 92433.3046875 0.2060092914546699 -320 1.4977431297302246 1 Carbamidomethyl (C),Oxidation (M) _YKLC(Carbamidomethyl (C))FECM(Oxidation (M))Y_ REV__ENSG00000136504|ENST00000259021|KAT7;REV__ENST00000444292.2_1_X:95228575-95229244:-|nuORF;REV__ENST00000512616.5_1_17:47892935-47904861:+|nuORF;REV__nc|ENSG00000136504|O95251-2|KAT7;REV__nc|ENSG00000136504|O95251-3|KAT7;REV__nc|ENSG00000136504|O95251-4|KAT7;REV__nc|ENSG00000136504|O95251-5|KAT7 0.6014990680409731 0.3444685223463735 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.623 28154.1 0.4199999868869781 25 1857 1883 DOHH2_400M_050219_1,1884 DOHH2_400M_050219_1,1884,YKLCFECMY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1885 7.7629 800.0 69302.0 25 0 3149.5 -1 0 44 1004.9417304513088 4015.7378159388354 4 1005.443530261517 MULTI CID FTMS 0 0 0 1883 108514.2734375 0.5591961372874615 18 -0.1330780982971191 2 1 H 1 -1 3.9794 0.0 0.0 0.099095 0.0 0.0 86.00351505303645 3789.64686334569 3875.6503783987273 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.099095 - 2 + 1 2.623 44629.2 0.3899999856948852 26 1857 1883 DOHH2_400M_050219_1,1885 DOHH2_400M_050219_1,1885, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1891 7.7955 800.0 46367.0 25 0 1547.9 -1 0 62 826.3618885109098 4126.773060221549 5 826.9656249880791 MULTI CID FTMS 0 0 0 1890 16378.9453125 0.1129520238702373 -16 0.1304574012756347 1 1 P{[{M(Oxidation (M))|F}D]|MM} 3 -1 7.4473 0.0 0.0 0.18046 0.0 0.0 3749.61419712618 0.0 3749.61419712618 0.0 6.73393743112328 0.0 0.0 0 0.0 0.0 0.0 0.0 P{[{M(Oxidation (M))|F}D]|MM} 0.18046 - 2 1 2.623 38533.7 0.3199999928474426 27 1862 1890 DOHH2_400M_050219_1,1891 DOHH2_400M_050219_1,1891, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1892 7.8053 555.0 153150.0 25 0 11440.0 -1 0 72 461.23570736456384 1840.913723591856 4 461.4870788455009 MULTI CID FTMS 0 0 0 1890 88403.8203125 0.4617849400756767 -16 0.1304574012756347 2 1 PY 2 -1 22.959 0.0 0.0 1.2471 0.0 0.0 1562.7869973729084 0.0 1562.7869973729084 0.0 10.48455006504028 0.0 0.0 0 0.5 0.0 0.0 0.0 PY 1.2471 - 36 + 1 2.623 71512.0 1.0 28 1862 1890 DOHH2_400M_050219_1,1892 DOHH2_400M_050219_1,1892, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1898 7.8377 800.0 56896.0 25 0 2851.5 -1 0 52 1032.6995361764525 4126.769038839409 4 1033.202685534954 MULTI CID FTMS 0 0 0 1897 40577.8984375 0.4054211052290638 -8 0.0543375015258789 1 1 CC(Carbamidomethyl (C)) 2 -1 14.693 0.0 0.0 0.35603 0.0 0.0 0.0 3860.660723460179 3860.660723460179 -1.7609125905568137 0.0 -1.7609125905568137 0.0 0 0.0 0.0 0.0 0.0 CC(Carbamidomethyl (C)) 0.35603 - 4 + 1 2.623 37811.4 0.3300000131130218 29 1867 1897 DOHH2_400M_050219_1,1898 DOHH2_400M_050219_1,1898, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1911 7.8982 800.0 95660.0 25 0 26720.0 6747 EDQLKQEIHY 10 80 434.8822735406421 0 434.8820373415947 PEAK CID FTMS 0 0 0 1910 87779.21875 0.6210936143952003 -340 1.6389436721801758 1 Unmodified _EDQLKQEIHY_ ENSG00000204010|ENST00000371809|IFIT1B 1.844237919475145 0.3961065659209837 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.623 63650.0 0.3600000143051147 30 1879 1910 DOHH2_400M_050219_1,1911 DOHH2_400M_050219_1,1911,EDQLKQEIHY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 1921 7.9469 800.0 28564.0 25 0 1807.0 -1 0 52 525.2360356513707 2096.9150367390826 4 525.2358276247978 MULTI CID FTMS 0 0 0 1920 41856.98046875 0.6119435997408628 1 -0.0163540840148925 1 1 HY 2 -1 16.454 0.0 0.0 0.78466 0.0 0.0 1778.7829699439635 0.0 1778.7829699439635 0.0 1.8495564253589687 0.0 0.0 0 0.0 0.0 0.0 0.0 HY 0.78466 - 39 + 1 2.623 28027.0 0.3499999940395355 31 1888 1920 DOHH2_400M_050219_1,1921 DOHH2_400M_050219_1,1921, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1924 7.9588 299.0 209960.0 25 0 23390.0 + 11960 GPEAGRKPA 9 98 441.7433195026465 881.472086072093 2 441.7433044314384 MULTI CID FTMS 0 0 0 1923 185334.390625 0.0520788336857181 51 -0.347048282623291 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 51.629811660486645 0.0367964933207742 1 GPEAS 5 5 72.933 0.0 0.0 8.274 0.0 0.0 0.0 437.2657564752563 437.2657564752563 47.71652514092061 0.0 0.0 0.0 0 1.75 2.0 0.5 0.0 GPEAS 8.274 - 181 + 1 2.623 53318.5 1.0 32 1890 1923 DOHH2_400M_050219_1,1924 DOHH2_400M_050219_1,1924,GPEAGRKPA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 1925 7.9726 800.0 36465.0 25 0 8147.8 -1 0 43 804.1550833095083 4015.739034214541 5 804.3566161990166 MULTI CID FTMS 0 0 0 1923 69521.484375 0.1433900995112385 50 -0.3431620597839355 2 1 Y[HV] 3 -1 8.9524 0.0 0.0 0.22293 0.0 0.0 3598.5782355635915 0.0 3598.5782355635915 0.0 3.4678748622465623 0.0 0.0 0 0.0 0.0 0.0 0.0 Y[HV] 0.22293 - 3 1 2.623 29838.9 0.3400000035762787 33 1890 1923 DOHH2_400M_050219_1,1925 DOHH2_400M_050219_1,1925, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1938 8.0335 800.0 40313.0 25 0 18173.0 + -1 QQQQMMQQRRL 11 39 745.8717798389415 0 745.8730956912041 PEAK CID FTMS 0 0 0 1937 78974.765625 0.5714759135144889 -9 0.0363669395446777 1 Oxidation (M) _QQQQM(Oxidation (M))MQQRRL_ REV__ENSG00000100393|ENST00000263253|EP300 1.3295316138638542 0.4761840153648598 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.623 30335.5 0.3600000143051147 34 1902 1937 DOHH2_400M_050219_1,1938 DOHH2_400M_050219_1,1938,QQQQMMQQRRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1943 8.0554 414.0 215340.0 25 0 14926.0 + 16625 KEHLPIHSN 9 114 358.86189167582086 1073.5638456276629 3 358.8620788455009 MULTI CID FTMS 0 0 0 1942 115104.9765625 0.909403214511998 2 -0.0276145935058593 1 Unmodified _KEHLPIHSN_ REV__ENST00000544547.5_1_2:109302217-109302484:+|nuORF 9.5439744041441 0.5815088571869578 1 TH[VP][RH] 6 -1 15.335 0.0 0.0 1.4284 0.0 0.0 328.18602187324376 0.0 328.18602187324376 0.0 0.2290356494451568 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 TH[VP][RH] 1.4284 - 129 1 2.623 73892.0 1.0 35 1906 1942 DOHH2_400M_050219_1,1943 DOHH2_400M_050219_1,1943,KEHLPIHSN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1944 8.0692 800.0 115980.0 25 0 7205.6 + -1 SRGEHRQDRRERPY 14 80 461.23570736456384 1840.913723591856 4 461.2349731326103 MULTI CID FTMS 0 0 0 1942 83242.4921875 0.4684351895139836 25 -0.1928968429565429 2 ENSG00000089280|ENST00000254108|FUS;ENST00000483853.1_1_16:31202042-31202756:+|nuORF;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 1 RPY 3 -1 14.97 0.0 0.0 0.8132 0.0 0.0 1406.6890969822834 0.0 1406.6890969822834 0.0 1.87138045237122 0.0 0.0 0 0.0 0.0 0.0 0.0 RPY 0.8132 - 68 + 1 2.623 77960.4 1.0 36 1906 1942 DOHH2_400M_050219_1,1944 DOHH2_400M_050219_1,1944, False False SRGEHRQDRRERPY 8.0692296 461.23497313261 2896414.75 1942.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000483853.1_1_16:31202042-31202756:+|nuORF;;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 7.250111738840739 4.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 1947 8.0811 297.0 176600.0 25 0 22015.0 -1 NEQRMKAAEK 10 81 407.5389025531529 1219.5948782596588 3 407.5388061404228 MULTI CID FTMS 0 0 0 1946 133484.828125 0.185124705108159 -20 0.1425724029541015 1 Oxidation (M) _NEQRM(Oxidation (M))KAAEK_ ENSG00000075856|ENST00000546815|SART3;nc|ENSG00000075856|Q15020-4|SART3 14.218169984304629 0.6089749286722269 1 HVDAAEK 7 -1 28.127 0.0 0.0 2.3063 0.0 0.0 451.2192771216386 0.0 451.2192771216386 0.0 1.2873043896565406 0.0 0.0 0 0.25 0.0 0.3054621874040891 0.2887254899964357 HVDAAEK 2.3063 - 174 + 1 2.623 49046.3 1.0 37 1908 1946 DOHH2_400M_050219_1,1947 DOHH2_400M_050219_1,1947,NEQRMKAAEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 1954 8.1177 800.0 18649.0 25 0 934.16 -1 0 39 826.3618885109098 4126.773060221549 5 826.7658569216728 MULTI CID FTMS 0 0 0 1953 9578.22265625 0.0782337038973834 37 -0.2502946853637695 1 1 R 1 -1 6.9897 0.0 0.0 0.16937 0.0 0.0 3667.924776385415 299.71283899478755 3967.637615380202 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.16937 - 3 + 1 2.623 22579.2 0.3199999928474426 38 1914 1953 DOHH2_400M_050219_1,1954 DOHH2_400M_050219_1,1954, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1955 8.1316 800.0 89522.0 25 0 33141.0 61 AADVGKSG 8 61 704.3574979379665 703.3502214713665 1 704.3575317263603 MULTI CID FTMS 0 0 0 1953 82431.875 0.5381931533201265 -85 0.6915664672851562 2 Unmodified _AADVGKSG_ ENSG00000169100|ENST00000381401|SLC25A6 44.40701690623563 0.1655546087385432 1 SVSNK 5 7 56.834 0.0 0.0 8.0804 0.0 0.0 170.06963167169448 0.0 170.06963167169448 0.0 37.23295214707255 0.0 0.0 0 1.7302046884880935 0.0 0.2887254899964357 1.3737125054200234 SVSNK 8.0804 - 149 + 1 2.623 57295.5 0.3600000143051147 39 1914 1953 DOHH2_400M_050219_1,1955 DOHH2_400M_050219_1,1955,AADVGKSG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 1959 8.1561 800.0 90080.0 25 0 6748.7 + 35646 SVDARMREEK 10 85 610.8044298708753 1219.5943068085503 2 610.8051635622978 MULTI CID FTMS 0 0 0 1958 82270.7421875 0.4879703106374989 -10 0.0704498291015625 1 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 40.23920728925047 0.1550410903091231 1 [VS]QHHVDAAEK 11 -1 + 132.16 0.0 0.0 10.837 10.837 93.082 0.0 0.0 0.0 111.27334704578496 17.95787811342238 17.95787811342238 9.128498242810991 0 3.853917193908117 2.0 1.0 0.6694451763165201 [VS]QHHVDAAEK;[VS][AG]HHVDAAEK;[VS]AGHHVDAAEK;[VS]AGHHVDAAA[VS];[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}V[NG]AAEK;[VS]QHHA[DV]AEK;[VS]{[MG]|[TS]}[DV]VDAAEK;WQHHVWAEK;[VS]QHHVDAAA[VS];[VS][KC][NG]VDAAEK 10.837;10.088;9.1879;8.4419;8.2642;8.0949;7.7716;7.6865;7.6306;7.5677 -;-;-;-;-;-;-;-;-;- 3956 + 1 2.623 60689.8 0.4000000059604645 40 1917 1958 DOHH2_400M_050219_1,1959 DOHH2_400M_050219_1,1959,SVDARMREEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1966 8.1925 800.0 132390.0 25 0 9643.6 + 36113 SVSFQIAFGQK 11 138 404.5508559768091 1210.6307385306272 3 404.5507995486259 MULTI CID FTMS 0 0 0 1965 57441.09375 0.5810593918240923 -9 0.0748624801635742 1 Unmodified _SVSFQIAFGQK_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 7.0370850670814 0.8419465095438622 1 [WK]HVDA{[CP]|[EA]}KK 10 -1 + 28.378 0.0 0.0 2.3441 2.3441 79.732 0.0 0.0 0.0 12.18388217506849 0.8916191666767475 0.8916191666767475 15.233189918372332 0 0.0 0.0 0.0 0.2215141619232908 [WK]HVDA{[CP]|[EA]}KK;[WK]HV[KA]{[CT]|[{M(Oxidation (M))|F}G]}AAP;[WK]H[KQ][{M(Oxidation (M))|F}V]AAP;[WK]HV[KA]N[MT]P 2.3441;1.0858;0.93676;0.29399 -;-;-;- 606 + 1 2.623 87884.5 0.3799999952316284 41 1923 1965 DOHH2_400M_050219_1,1966 DOHH2_400M_050219_1,1966,SVSFQIAFGQK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1969 8.206 389.0 248350.0 25 0 158280.0 43827 YFFLFQNFC 9 41 614.7770485618581 0 614.7771484255791 PEAK CID FTMS 0 0 0 1968 266883.9375 0.4706409253438595 -273 1.499138355255127 1 Unmodified _YFFLFQNFC_ ENST00000526600.1_1_11:12962072-12962216:+|nuORF 0.6014990680409731 0.3444685223463735 1 M 1 9 4.6041 0.0 0.0 0.37507 0.0 0.0 649.1626653836787 444.3159884088501 1093.4786537925288 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.37507 - 1 + 1 2.623 75679.4 1.0 42 1925 1968 DOHH2_400M_050219_1,1969 DOHH2_400M_050219_1,1969,YFFLFQNFC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 1973 8.2304 800.0 41340.0 25 0 22182.0 + -1 CYRRDECDV 9 39 636.7588792217367 0 636.7595092654228 PEAK CID FTMS 0 0 0 1972 107736.390625 0.2401158064355264 -249 1.408191204071045 1 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))YRRDEC(Carbamidomethyl (C))DV_ REV__ENSG00000136044|ENST00000258530|APPL2;REV__ENSG00000157500|ENST00000288266|APPL1;REV__ENST00000482800.5_1_3:57261911-57301862:+|nuORF;REV__ENST00000547809.5_1_12:105570964-105626916:-|nuORF;REV__nc|ENSG00000136044|Q8NEU8-2|APPL2;REV__nc|ENSG00000136044|Q8NEU8-3|APPL2 0.5247636613948944 0.3444685223463735 1 N 1 -1 3.0989 0.0 0.0 0.24372 0.0 0.0 635.3052207464046 519.1178682916624 1154.423089038067 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.24372 - 2 + 1 2.623 31231.4 0.4900000095367431 43 1928 1972 DOHH2_400M_050219_1,1973 DOHH2_400M_050219_1,1973,CYRRDECDV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1985 8.2801 385.0 255660.0 25 0 73177.0 + 25446 NEHRCKGYRK 10 69 430.888237071679 0 430.8880798220634 PEAK CID FTMS 0 0 0 1984 254843.84375 0.6848629061170454 -671 3.1309075355529785 1 Unmodified _NEHRCKGYRK_ REV__ENSG00000105750|ENST00000328178|ZNF85;REV__nc|ENSG00000105750|Q03923-2|ZNF85 3.5964929083625545 0.3961065659209837 1 T 1 -1 7.0116 0.0 0.0 0.81553 0.0 0.0 430.5285665732424 325.1628817193969 755.6914482926393 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T 0.81553 - 8 + 1 2.623 82536.4 1.0 44 1939 1984 DOHH2_400M_050219_1,1985 DOHH2_400M_050219_1,1985,NEHRCKGYRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1986 8.2939 800.0 94125.0 25 0 27434.0 + 10493 FTTPEHNIKSE 11 64 434.8822735406421 0 434.8822204470634 PEAK CID FTMS 0 0 0 1984 93081.46875 0.6586103941503966 -280 1.5451483726501465 2 Unmodified _FTTPEHNIKSE_ REV__ENSG00000163898|ENST00000296252|LIPH 3.2813086475875832 0.4761840153648598 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.623 65734.3 0.4099999964237213 45 1939 1984 DOHH2_400M_050219_1,1986 DOHH2_400M_050219_1,1986,FTTPEHNIKSE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 1989 8.3142 800.0 17376.0 25 0 845.31 -1 0 46 684.5560962376279 2734.1952790841115 4 684.8069946169853 MULTI CID FTMS 0 0 0 1988 42102.92578125 0.592574085305914 1 -0.016392707824707 1 1 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.11334 0.0 0.0 2386.042521371024 198.08832727603752 2584.1308486470616 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.11334 - 9 + 1 2.623 18071.1 0.3300000131130218 46 1941 1988 DOHH2_400M_050219_1,1989 DOHH2_400M_050219_1,1989, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 1994 8.3315 124.0 332860.0 25 0 52054.0 + 35647 SVDARMREEK 10 65 407.5389025531529 1219.5948782596588 3 407.5386840701103 MULTI CID FTMS 0 0 0 1993 382166.78125 0.530011640085337 17 -0.0816774368286132 1 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 13.90604991867851 0.6142120002215601 1 [VS]QHHVDAAEK 11 -1 [VS]Q + + 38.867 27.277 8.6825 3.1869 3.1869 50.885 0.0 0.0 0.0 0.0 9.74040539889576 0.0 0.0 0 0.4247425010840047 0.0 0.7742275032520141 0.3054621874040891 [VS]QHHVDAAEK 3.1869 - 119 + 1 2.623 40163.9 1.0 47 1945 1993 DOHH2_400M_050219_1,1994 DOHH2_400M_050219_1,1994,SVDARMREEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2005 8.3841 800.0 60028.0 25 0 22012.0 -1 FERFRLSCHCF 11 34 779.8562104307022 0 779.8558227419853 PEAK CID FTMS 0 0 0 2004 84075.3828125 0.3799991539605381 -168 1.1268577575683594 1 2 Carbamidomethyl (C) _FERFRLSC(Carbamidomethyl (C))HC(Carbamidomethyl (C))F_ ENST00000565488.5_1_1:108678460-108678724:-|nuORF 0.3506318815782774 0.47618401536486 1 T 1 -1 5.4846 0.0 0.0 0.35209 0.0 0.0 934.5069632424604 519.1145723932249 1453.6215356356854 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.35209 - 1 + 1 2.623 40129.3 0.3899999856948852 48 1955 2004 DOHH2_400M_050219_1,2005 DOHH2_400M_050219_1,2005,FERFRLSCHCF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2032 8.4965 538.0 51637.0 25 0 26011.0 + -1 GVECRCYNQS 10 39 636.7588792217367 0 636.7587158083916 PEAK CID FTMS 0 0 0 2031 158438.03125 0.3531163001002094 -196 1.2516484260559082 1 2 Carbamidomethyl (C) _GVEC(Carbamidomethyl (C))RC(Carbamidomethyl (C))YNQS_ REV__ENSG00000124882|ENST00000244869|EREG 0.4583401331227399 0.3961065659209837 1 A 1 -1 0.088644 0.0 0.0 0.0069716 0.0 0.0 1070.6752768987485 126.7701357477172 1197.4454126464657 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.0069716 - 1 + 1 2.623 25478.2 1.0 49 1981 2031 DOHH2_400M_050219_1,2032 DOHH2_400M_050219_1,2032,GVECRCYNQS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2042 8.5379 372.0 291510.0 25 0 69238.0 + 25447 NEHRCKGYRK 10 80 430.888237071679 0 430.8882324099541 PEAK CID FTMS 0 0 0 2041 240369.890625 0.6459658566363695 -620 2.978482246398926 1 Unmodified _NEHRCKGYRK_ REV__ENSG00000105750|ENST00000328178|ZNF85;REV__nc|ENSG00000105750|Q03923-2|ZNF85 3.5964929083625545 0.3961065659209837 1 T 1 -1 7.7866 0.0 0.0 0.90567 0.0 0.0 430.52865812597673 325.1626070611938 755.6912651871705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T 0.90567 - 10 + 1 2.623 88315.5 1.0 50 1990 2041 DOHH2_400M_050219_1,2042 DOHH2_400M_050219_1,2042,NEHRCKGYRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2053 8.5904 800.0 98979.0 25 0 11285.0 + 11961 GPEAGRKPA 9 94 441.74307600423367 881.4715990752674 2 441.7429382205009 MULTI CID FTMS 0 0 0 2052 95577.3125 0.8308838216362383 -3 0.0120058059692382 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 41.8396318013385 0.0653578398400075 1 GPEAS 5 5 66.542 0.0 0.0 7.549 0.0 0.0 0.0 437.2663631039307 437.2663631039307 49.26548373532147 0.0 0.0 0.0 0 1.110924374808178 1.6989700043360187 0.5 0.0 GPEAS 7.549 - 118 + 1 2.623 64530.5 0.4099999964237213 51 2000 2052 DOHH2_400M_050219_1,2053 DOHH2_400M_050219_1,2053,GPEAGRKPA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2063 8.6391 800.0 128240.0 25 0 12389.0 + 35648 SVDARMREEK 10 110 407.5392407916288 1219.5958929750864 3 407.5391418337822 MULTI CID FTMS 0 0 0 2062 62938.11328125 0.5236110128050113 -13 0.0647468566894531 1 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 17.11289562659939 0.5604042439455784 1 [WQ]HHA{[RE]|[WV]}EK 9 -1 + 40.326 0.0 0.0 3.3065 3.3065 80.637 0.0 0.0 0.0 16.387437564371012 1.4304901165180794 1.4304901165180794 11.270401720786346 0 0.4247425010840047 1.0457574905606752 0.3252574989159953 0.3494850021680094 [WQ]HHA{[RE]|[WV]}EK;[WQ]HHA[R{M(Oxidation (M))|F}]AAP;[WQ]HH[KP]QPY;[WQ]HH[QP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q;[WQ]HH[HS]{I|L}{I|L}Y;[WQ]HHA[PG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q;[WQ]HH[KP]Q{M(Oxidation (M))|F}{I|L};[WQ]HH[KP]QYP;[WQ]HH[HS][Y{I|L}]{I|L};[WQ]HHA{[RE]|[WV]}{[SA]|[TG]}V 3.3065;2.3824;2.1731;2.1266;2.0937;2.089;1.9954;1.9263;1.916;1.6779 -;-;-;-;-;-;-;-;-;- 524 + 1 2.623 85997.8 0.8299999833106995 52 2009 2062 DOHH2_400M_050219_1,2063 DOHH2_400M_050219_1,2063,SVDARMREEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2075 8.6891 392.0 158630.0 25 0 26118.0 + 30497 REFLYVEKQ 9 95 404.5508132177909 1210.6306102535725 3 404.5503112673759 MULTI CID FTMS 0 0 0 2074 52441.93359375 0.5331609258487638 -10 0.0404167175292968 1 Unmodified _REFLYVEKQ_ REV__ENSG00000136631|ENST00000644510|VPS45;REV__ENST00000460366.5_1_1:150039914-150049098:+|nuORF;REV__ENST00000478999.1_1_1:150039540-150040875:+|nuORF;REV__ENST00000497638.2_1_1:150039914-150048408:+|nuORF;REV__nc|ENSG00000136631|Q9NRW7-2|VPS45 7.608950283845883 0.6490595679007971 1 [VS]AE 4 -1 29.041 0.0 0.0 2.3988 0.0 0.0 0.0 821.428167021352 821.428167021352 14.617278141663 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]AE 2.3988 - 147 1 2.623 53901.6 1.0 53 2020 2074 DOHH2_400M_050219_1,2075 DOHH2_400M_050219_1,2075,REFLYVEKQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2084 8.7266 388.0 232910.0 25 0 19455.0 + 13809 HTKIRHVDA 9 117 359.5367002026376 1075.5882712081127 3 359.5368224978447 MULTI CID FTMS 0 0 0 2083 171562.1875 0.3530186039214072 -20 0.0982866287231445 1 Unmodified _HTKIRHVDA_ ENSG00000138757|ENST00000359707|G3BP2;ENSG00000145907|ENST00000356245|G3BP1;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000138757|Q9UN86-2|G3BP2;nc|ENSG00000145907|Q13283-2|G3BP1 33.4449034751529 0.1114409586740657 1 DA 2 7 24.693 0.0 0.0 2.2957 0.0 0.0 871.5136690126034 0.0 871.5136690126034 0.0 9.208187539523747 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 + DA 2.2957 + + 45 + 1 2.623 79094.2 1.0 54 2028 2083 DOHH2_400M_050219_1,2084 DOHH2_400M_050219_1,2084,HTKIRHVDA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2102 8.8073 800.0 78058.0 25 0 9928.1 + 13811 HTKIRHVDA 9 73 538.8013242695735 1075.5880956059468 2 538.8016845583916 MULTI CID FTMS 0 0 0 2101 58092.47265625 0.657973296810706 1 -0.0163860321044921 1 Unmodified _HTKIRHVDA_ ENSG00000138757|ENST00000359707|G3BP2;ENSG00000145907|ENST00000356245|G3BP1;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000138757|Q9UN86-2|G3BP2;nc|ENSG00000145907|Q13283-2|G3BP1 32.89776655970281 0.1144444835665315 1 HTK{I|L} 4 5 53.66 0.0 0.0 4.9889 0.0 0.0 0.0 593.2802218072874 593.2802218072874 42.239892097575634 0.0 0.0 0.0 0 0.7742275032520141 1.3979400086720375 0.0 0.0 + HTK{I|L} 4.9889 + + 60 + 1 2.623 50778.6 0.3799999952316284 55 2045 2101 DOHH2_400M_050219_1,2102 DOHH2_400M_050219_1,2102,HTKIRHVDA True True HTKIRHVDA 8.8072898 538.801684558392 5290832.46875 2101.0 ENSG00000145907|ENST00000356245|G3BP1;;nc|ENSG00000145907|Q13283-2|G3BP1;;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;;ENSG00000138757|ENST00000359707|G3BP2;;nc|ENSG00000138757|Q9UN86-2|G3BP2 2.016227205594381 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2107 8.8345 729.0 52210.0 25 0 30510.0 + -1 RCENRCMCK 9 43 636.7588792217367 0 636.7583495974541 PEAK CID FTMS 0 0 0 2106 180729.96875 0.4027991093977096 -128 0.6512460708618164 1 2 Carbamidomethyl (C),Oxidation (M) _RCENRC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))K_ REV__ENST00000340208.9_2_5:88119704-88183347:-|nuORF 1.844237919475145 0.3444685223463735 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.623 35724.2 1.0 56 2049 2106 DOHH2_400M_050219_1,2107 DOHH2_400M_050219_1,2107,RCENRCMCK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2115 8.875 800.0 104420.0 25 0 29549.0 + 28636 PVHREEHGRGE 11 70 434.8822735406421 0 434.8819457888603 PEAK CID FTMS 0 0 0 2114 85973.515625 0.6083171201816315 -163 0.8779473304748535 1 Unmodified _PVHREEHGRGE_ ENSG00000124782|ENST00000379938|RREB1;nc|ENSG00000124782|Q92766-4|RREB1;nc|ENSG00000124782|Q92766|RREB1 2.9952420565917617 0.4761840153648598 1 R 1 10 5.7133 0.0 0.0 0.65841 0.0 0.0 433.5224683685905 275.1034334772094 708.6259018458 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 + R 0.65841 + + 4 + 1 2.623 68834.2 0.3600000143051147 57 2056 2114 DOHH2_400M_050219_1,2115 DOHH2_400M_050219_1,2115,PVHREEHGRGE False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2141 8.9813 412.0 245280.0 25 0 19183.0 + 13810 HTKIRHVDA 9 124 359.5367002026376 1075.5882712081127 3 359.5366393923759 MULTI CID FTMS 0 0 0 2140 181399.578125 0.3732607211109368 33 -0.2098989486694336 1 Unmodified _HTKIRHVDA_ ENSG00000138757|ENST00000359707|G3BP2;ENSG00000145907|ENST00000356245|G3BP1;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000138757|Q9UN86-2|G3BP2;nc|ENSG00000145907|Q13283-2|G3BP1 24.881564428377168 0.2146028316269493 1 HVDA 4 5 27.875 0.0 0.0 2.5916 0.0 0.0 635.386034080275 0.0 635.386034080275 0.0 13.895840698003 0.0 0.0 0 0.7429928190999391 0.0 0.4247425010840047 0.0 + HVDA 2.5916 + + 68 1 2.623 88540.1 1.0 58 2081 2140 DOHH2_400M_050219_1,2141 DOHH2_400M_050219_1,2141,HTKIRHVDA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2147 9.0137 800.0 79138.0 25 0 13108.0 -1 0 37 542.5256197548704 2166.0733731530813 4 542.5256835818291 MULTI CID FTMS 0 0 0 2146 69649.7109375 0.8068618841523186 -4 0.0160627365112304 1 1 H 1 -1 16.99 0.0 0.0 0.78435 0.0 0.0 2011.0040199810087 0.0 2011.0040199810087 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.78435 - 7 + 1 2.623 56513.5 0.3600000143051147 59 2086 2146 DOHH2_400M_050219_1,2147 DOHH2_400M_050219_1,2147, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2151 9.0382 800.0 84199.0 25 0 17418.0 + -1 SQSTYSLDNM 10 99 387.829204216246 1160.465783248938 3 387.8297607302666 MULTI CID FTMS 0 0 0 2150 54507.609375 0.5014525792058333 -1 0.004058837890625 1 Oxidation (M) _SQSTYSLDNM(Oxidation (M))_ REV__ENST00000520575.1_1_8:97249690-97249747:+|nuORF 3.5870582119611467 0.710044248540513 1 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 1.2585 0.0 0.0 995.4198980944442 0.0 995.4198980944442 0.0 1.839883926472972 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2585 + + 65 + 1 2.623 61667.2 0.8700000047683716 60 2089 2150 DOHH2_400M_050219_1,2151 DOHH2_400M_050219_1,2151,SQSTYSLDNM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2152 9.052 800.0 15378.0 25 0 879.27 + -1 TCLPHRCHSGQ 11 41 648.2897932091768 1294.5650334851534 2 648.2905761599541 MULTI CID FTMS 0 0 0 2150 66176.9453125 1.0 0 0.0 2 Carbamidomethyl (C) _TC(Carbamidomethyl (C))LPHRCHSGQ_ REV__ENST00000307630.4_1_7:75957793-75957970:-|nuORF 5.296884461304476 0.8501568894076437 1 S{[QG]|[NA]} 3 -1 15.502 0.0 0.0 1.1975 0.0 0.0 1004.4426102447222 0.0 1004.4426102447222 0.0 3.81945917508361 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 S{[QG]|[NA]} 1.1975 + + 24 + 1 2.623 19316.1 0.3300000131130218 61 2089 2150 DOHH2_400M_050219_1,2152 DOHH2_400M_050219_1,2152,TCLPHRCHSGQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2164 9.1061 656.0 169250.0 25 0 25907.0 + 45422 YTDHGSDHHY 10 115 411.1636345254293 1230.469074176488 3 411.1635619997978 MULTI CID FTMS 0 0 0 2163 89445.03125 0.3136339509641405 -15 0.0987930297851562 1 Unmodified _YTDHGSDHHY_ ENSG00000076053|ENST00000375490|RBM7;ENST00000265882.5_1_2:80389676-80390174:-|nuORF;ENST00000541475.5_1_11:114278100-114278526:+|nuORF;nc|ENSG00000076053|Q9Y580|RBM7 32.037481411007896 0.2488723560272515 1 [HD][SG]SEHYHY 10 5 + 29.294 0.0 0.0 2.3807 2.3807 80.044 0.0 0.0 0.0 0.7378621416091882 8.491983629996444 0.7378621416091882 16.98970004336019 0 0.6989700043360187 0.9208187539523752 0.3252574989159953 0.0 [HD][SG]SEHYHY;[HS][DG]SEHYHY 2.3807;0.99993 -;- 594 1 2.623 89159.9 1.0 62 2100 2163 DOHH2_400M_050219_1,2164 DOHH2_400M_050219_1,2164,YTDHGSDHHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2170 9.1369 705.0 170150.0 25 0 14337.0 37603 TLKPCAVDTLV 11 143 387.2193813214189 1158.6363145644566 3 387.2200805544853 MULTI CID FTMS 0 0 0 2169 91803.890625 0.3099024380363803 -11 0.0540189743041992 1 Unmodified _TLKPCAVDTLV_ ENSG00000133863|ENST00000643185|TEX15;nc|ENSG00000133863|Q9BXT5|TEX15 19.143941131932102 0.6369309327873195 1 [{I|L}T]V{M(Oxidation (M))|F}KNRN 8 9 62.568 0.0 0.0 5.4001 0.0 0.0 0.0 183.07766138248283 183.07766138248283 37.30713133096572 0.0 0.0 0.0 0 0.2302046884880938 2.0 0.0 0.8494850021680094 [{I|L}T]V{M(Oxidation (M))|F}KNRN 5.4001 - 1273 + 1 2.623 98758.4 1.0 63 2105 2169 DOHH2_400M_050219_1,2170 DOHH2_400M_050219_1,2170,TLKPCAVDTLV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2174 9.1612 800.0 115730.0 25 0 12838.0 + 10701 FVWLVTCERF 10 62 433.8887715720857 1298.6444853164571 3 434.2215148806572 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _FVWLVTCERF_ REV__ENST00000447669.6_1_17:33396592-33416206:-|nuORF 2.0860074813731053 0.7169874864248246 1 {M(Oxidation (M))|F} 1 -1 12.764 0.0 0.0 0.98289 0.0 0.0 1133.5651071199711 0.0 1133.5651071199711 0.0 7.61389733311812 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.98289 + + 33 + 1 2.623 81127.4 0.3600000143051147 64 2108 2173 DOHH2_400M_050219_1,2174 DOHH2_400M_050219_1,2174,FVWLVTCERF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2182 9.2017 800.0 88009.0 25 0 5510.3 + 41928 VQHVDAAEK 9 97 498.7590185582604 995.5034841833208 2 498.7589599490166 MULTI CID FTMS 0 0 0 2181 113510.8515625 1.0 0 0.0 1 Unmodified _VQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 36.39500950444726 0.095246261068787 1 {[QV]|[N{I|L}]|[RA]|[KV]}HVDAAEK 9 0 + 60.437 0.0 0.0 6.071 6.071 92.958 0.0 0.0 0.0 18.61887214954777 17.715299873086607 17.715299873086607 37.0597718523608 0 1.3807196863200843 0.0 0.3252574989159953 0.2742275032520141 + + {[QV]|[N{I|L}]|[RA]|[KV]}HVDAAEK;{[QV]|[N{I|L}]|[RA]|[KV]}HHH[NP]K;{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}AA[W{M(Oxidation (M))|F}] 6.071;2.3483;2.0676 +;-;- + 285 + 1 2.623 55387.9 0.4099999964237213 65 2115 2181 DOHH2_400M_050219_1,2182 DOHH2_400M_050219_1,2182,VQHVDAAEK True True VQHVDAAEK 9.2017458 498.758959949017 447489.1875 2181.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 6.941742420196533 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2187 9.223 372.0 290830.0 25 0 20858.0 + 7816 ELKEKKKEL 9 113 382.235892220348 1143.685847261244 3 382.2355529665947 MULTI CID FTMS 0 0 0 2186 192336.359375 0.6787986225428034 -9 0.048537254333496 1 Unmodified _ELKEKKKEL_ ENSG00000072501|ENST00000322213|SMC1A 35.61225514009592 0.0995432151795903 1 KKK{M(Oxidation (M))|F}{I|L} 5 5 39.438 0.0 0.0 3.4483 0.0 0.0 481.2527363535914 0.0 481.2527363535914 0.0 25.94335023848103 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.4247425010840047 KKK{M(Oxidation (M))|F}{I|L} 3.4483 - 253 1 2.623 89722.1 1.0 66 2119 2186 DOHH2_400M_050219_1,2187 DOHH2_400M_050219_1,2187,ELKEKKKEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2192 9.2514 800.0 70263.0 25 0 6462.5 + 7817 ELKEKKKEL 9 82 572.8501613244134 1143.6857697156267 2 572.8508788943291 MULTI CID FTMS 0 0 0 2191 57940.30078125 0.6802122111817409 1 -0.0163707733154296 1 Unmodified _ELKEKKKEL_ ENSG00000072501|ENST00000322213|SMC1A 35.079672537005266 0.1024668437275948 1 {I|L}EKEKKKE{I|L} 9 2 + 75.204 0.0 0.0 6.5756 6.5756 83.817 0.0 0.0 0.0 59.82574745418727 15.775006193212278 15.775006193212278 3.750612633917001 0 1.3807196863200843 1.6989700043360187 1.3807196863200843 0.0 {I|L}EKEKKKE{I|L};E{I|L}KEKKKE{I|L} 6.5756;6.2477 -;+ + 99 + 1 2.623 47348.4 0.3700000047683716 67 2123 2191 DOHH2_400M_050219_1,2192 DOHH2_400M_050219_1,2192,ELKEKKKEL True True ELKEKKKEL 9.2514121 572.850878894329 314178.21875 2191.0 ENSG00000072501|ENST00000322213|SMC1A 1.7263428767522175 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2211 9.3352 743.0 230350.0 25 0 41734.0 + 32700 SEAELQRRH 9 153 375.8634990412549 1124.5686677239646 3 375.8633605837822 MULTI CID FTMS 0 0 0 2210 92107.3046875 0.6130246912553156 1 -0.0154104232788085 1 Unmodified _SEAELQRRH_ ENSG00000122545|ENST00000350320|SEPTIN7;nc|ENSG00000122545|Q16181-2|SEPTIN7 27.22323531849824 0.1848086127304535 1 SEHAE 5 6 64.787 0.0 0.0 5.7611 0.0 0.0 0.0 568.3319514540976 568.3319514540976 52.797655200373455 0.0 0.0 0.0 0 0.5591430016092657 2.0 0.4247425010840047 0.0 SEHAE 5.7611 - 215 + 1 2.623 135818.2 1.0 68 2141 2210 DOHH2_400M_050219_1,2211 DOHH2_400M_050219_1,2211,SEAELQRRH False True SEAELQRRH 9.3352179 375.863360583782 491929.3125 2210.0 ENSG00000122545|ENST00000350320|SEPTIN7;;nc|ENSG00000122545|Q16181-2|SEPTIN7 0.3206783533096313 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2215 9.3595 800.0 137450.0 25 0 18891.0 + 45423 YTDHGSDHHY 10 113 411.1636345254293 1230.469074176488 3 411.1634094119072 MULTI CID FTMS 0 0 0 2214 101372.96875 0.3554585902168472 29 -0.1627883911132812 1 Unmodified _YTDHGSDHHY_ ENSG00000076053|ENST00000375490|RBM7;ENST00000265882.5_1_2:80389676-80390174:-|nuORF;ENST00000541475.5_1_11:114278100-114278526:+|nuORF;nc|ENSG00000076053|Q9Y580|RBM7 28.49450938151212 0.328477364964909 1 [YT]E 3 8 22.051 0.0 0.0 1.7921 0.0 0.0 0.0 834.2921387118973 834.2921387118973 5.689681045957325 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [YT]E 1.7921 - 416 1 2.623 86520.2 0.4199999868869781 69 2144 2214 DOHH2_400M_050219_1,2215 DOHH2_400M_050219_1,2215,YTDHGSDHHY False True YTDHGSDHHY 9.3595216 411.163409411907 2743000.75 2214.0 ENSG00000076053|ENST00000375490|RBM7;;ENST00000541475.5_1_11:114278100-114278526:+|nuORF;;ENST00000265882.5_1_2:80389676-80390174:-|nuORF;;nc|ENSG00000076053|Q9Y580|RBM7 5.717203458150228 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2222 9.396 800.0 161560.0 25 0 27825.0 + 11084 GEEENQKRY 9 129 384.8476891005487 1151.521237901846 3 384.8470641970634 MULTI CID FTMS 0 0 0 2221 87606.2421875 0.464820023574273 -28 0.1486654281616211 1 Unmodified _GEEENQKRY_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2 49.93300154707207 0.0405168250806675 1 WEENQK 6 4 56.943 0.0 0.0 4.945 0.0 0.0 0.0 334.15288748985097 334.15288748985097 8.807196863200843 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.0 0.8494850021680094 WEENQK 4.945 - 306 + 1 2.623 107528.7 0.8500000238418579 70 2150 2221 DOHH2_400M_050219_1,2222 DOHH2_400M_050219_1,2222,GEEENQKRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2225 9.4118 520.0 183070.0 25 0 21288.0 + 13317 HLAPSPSK 8 96 418.7367533237901 835.4589537143803 2 418.7365295290947 MULTI CID FTMS 0 0 0 2224 79846.1953125 0.6726084516652505 -14 0.0923147201538086 1 Unmodified _HLAPSPSK_ REV__ENSG00000047188|ENST00000161863|YTHDC2;REV__ENST00000512600.1_1_5:112919975-112927944:+|nuORF 11.640296217721598 0.738950129755968 1 {M(Oxidation (M))|F}K 2 -1 22.842 0.0 0.0 2.734 0.0 0.0 542.3181588919178 0.0 542.3181588919178 0.0 13.889405953541576 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.2396518287104437 {M(Oxidation (M))|F}K 2.734 - 55 + 1 2.623 79020.7 1.0 71 2152 2224 DOHH2_400M_050219_1,2225 DOHH2_400M_050219_1,2225,HLAPSPSK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2229 9.4376 800.0 80957.0 25 0 8304.9 + 11085 GEEENQKRY 9 96 576.7673773070976 1151.5202016809951 2 576.7676879763603 MULTI CID FTMS 0 0 0 2228 83869.140625 0.8218449963704925 -14 0.1001205444335937 1 Unmodified _GEEENQKRY_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2 69.10491478415734 0.0214449631113747 1 {[DA]|[EG]}EENQKRY 9 0 + 84.096 0.0 0.0 7.303 7.303 91.496 0.0 0.0 0.0 43.83471251333795 11.706962271689749 11.706962271689749 9.208187539523747 0 1.2302046884880935 1.6989700043360187 0.4247425010840047 0.8494850021680094 + + {[DA]|[EG]}EENQKRY;{[DA]|[EG]}EEN[AG]KRY;{[DA]|[EG]}EEGGQKRY;{[DA]|[EG]}EEGG[AG]KRY;{[CT]|[{M(Oxidation (M))|F}G]}QRYYRY;{[CT]|[{M(Oxidation (M))|F}G]}[AG]RYYRY 7.303;6.5033;6.5033;5.7075;1.6544;0.8501 +;-;-;-;-;- + 143 + 1 2.623 52560.2 0.3700000047683716 72 2155 2228 DOHH2_400M_050219_1,2229 DOHH2_400M_050219_1,2229,GEEENQKRY True True GEEENQKRY 9.4376296 576.76768797636 1687894.1875 2228.0 ENST00000521903.5_1_8:124361561-124413087:-|nuORF;;nc|ENSG00000156802|Q6PL18-2|ATAD2;;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;;ENSG00000156802|ENST00000287394|ATAD2;;ENST00000517666.5_1_8:124333376-124408650:-|nuORF 7.389837265014648 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2251 9.5261 308.0 173550.0 25 0 21785.0 + 7211 EEQSPLLLHD 10 94 394.1981926093222 1179.5727484281665 3 394.1975890994072 MULTI CID FTMS 0 0 0 2250 74983.5546875 0.6107581794956347 -4 0.0160646438598632 1 Unmodified _EEQSPLLLHD_ REV__ENSG00000156675|ENST00000330843|RAB11FIP1;REV__ENST00000522774.1_1_8:37728794-37730726:-|nuORF;REV__ENST00000523182.5_1_8:37720415-37730726:-|nuORF;REV__nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1 3.5870582119611467 0.710044248540513 1 {M(Oxidation (M))|F} 1 -1 11.594 0.0 0.0 0.98288 0.0 0.0 1014.4939805832432 0.0 1014.4939805832432 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.98288 - 63 + 1 2.623 45938.8 1.0 73 2176 2250 DOHH2_400M_050219_1,2251 DOHH2_400M_050219_1,2251,EEQSPLLLHD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2262 9.5707 334.0 190390.0 25 0 22431.0 + -1 IQRLETMK 8 77 517.7866844083214 1033.5588158834428 2 517.7870971560478 MULTI CID FTMS 0 0 0 2261 170452.234375 0.2705524725733407 -64 0.3311681747436523 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 1 T{M(Oxidation (M))|F}K 3 -1 31.432 0.0 0.0 3.0411 0.0 0.0 639.3714207191834 0.0 639.3714207191834 0.0 0.1846696346240683 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.2887254899964357 T{M(Oxidation (M))|F}K 3.0411 + + 166 + 1 2.623 54091.4 1.0 74 2186 2261 DOHH2_400M_050219_1,2262 DOHH2_400M_050219_1,2262,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2265 9.5912 800.0 42101.0 25 0 2205.3 -1 0 73 925.9384946087998 1849.8624362844 2 926.4402343630792 MULTI CID FTMS 0 0 0 2264 60931.6953125 0.7717399317182576 1 -0.0163869857788085 1 1 S[NS]{I|L}VWDEGN[RD] 12 -1 38.031 0.0 0.0 2.0559 0.0 0.0 459.21712486037455 0.0 459.21712486037455 0.0 25.26642789769003 0.0 0.0 0 0.6677353201839438 0.0 0.0 1.2302046884880935 S[NS]{I|L}VWDEGN[RD] 2.0559 - 536 + 1 2.623 30184.0 0.3400000035762787 75 2188 2264 DOHH2_400M_050219_1,2265 DOHH2_400M_050219_1,2265, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2273 9.6316 800.0 201720.0 25 0 14290.0 10294 FRRQISSSA 9 192 351.19162278717124 0 351.1915466189384 PEAK CID FTMS 0 0 0 2272 101418.9609375 0.7954105660664991 4 -0.0408391952514648 1 Unmodified _FRRQISSSA_ ENST00000478389.5_1_20:57566216-57566594:+|nuORF;ENST00000490205.1_1_20:57566094-57566594:+|nuORF 4.3292370932331545 0.3444685223463734 1 S 1 8 7.3907 0.0 0.0 1.0553 0.0 0.0 350.2218394924048 260.08916045402907 610.3109999464339 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.3054621874040891 0.0 + S 1.0553 + + 9 + 1 2.623 127235.4 0.3700000047683716 76 2195 2272 DOHH2_400M_050219_1,2273 DOHH2_400M_050219_1,2273,FRRQISSSA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2276 9.652 800.0 110520.0 25 0 27441.0 -1 TVPHSFNKRGC 11 76 434.8822735406421 0 434.8826171755791 PEAK CID FTMS 0 0 0 2275 99670.8515625 0.7052344544454107 -22 0.1217432022094726 1 Carbamidomethyl (C) _TVPHSFNKRGC(Carbamidomethyl (C))_ ENST00000389574.7_3_7:912996-913116:+|nuORF 4.406150317652783 0.47618401536486 1 SR 2 -1 8.1257 0.0 0.0 0.93641 0.0 0.0 346.4851758881218 275.1028841608032 621.588060048925 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 SR 0.93641 - 10 + 1 2.623 73960.5 0.4199999868869781 77 2197 2275 DOHH2_400M_050219_1,2276 DOHH2_400M_050219_1,2276,TVPHSFNKRGC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2281 9.6734 371.0 214110.0 25 0 31195.0 + 6944 EEHLESHKKY 10 98 433.8825368596022 1298.6257811790067 3 433.8820678591728 MULTI CID FTMS 0 0 0 2280 90589.875 0.2868824205797015 -18 0.1140289306640625 1 Unmodified _EEHLESHKKY_ nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2 17.86316937532769 0.5478153791579383 1 Y 1 9 18.495 0.0 0.0 1.4242 0.0 0.0 1117.5517282999035 0.0 1117.5517282999035 0.0 5.975040286529737 0.0 0.0 0 0.5 0.0 0.0 0.0 + Y 1.4242 + + 117 + 1 2.623 69178.2 1.0 78 2201 2280 DOHH2_400M_050219_1,2281 DOHH2_400M_050219_1,2281,EEHLESHKKY False True EEHLESHKKY 9.6733696 433.882067859173 1551151.125 2280.0 nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2;;nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2;;nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2;;nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2;;nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2 5.449297746022542 3.0 True 10.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 2282 9.6872 800.0 75243.0 25 0 5488.4 + 7596 EINKKGKSL 9 100 508.8085291112984 1015.6025052893968 2 508.8087341189384 MULTI CID FTMS 0 0 0 2280 97782.5859375 1.0 0 0.0 2 Unmodified _EINKKGKSL_ ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33 36.506200033944 0.094635877243972 1 {[QN]|[E{I|L}]|[KN]}NKK[KG]S{I|L} 9 0 {[QN]|[E{I|L}]|[KN]} + + 26.573 24.256 10.018 2.6165 2.6165 49.658 0.0 0.0 0.0 0.0 12.114565869747072 0.0 0.0 0 0.7742275032520141 0.0 0.2742275032520141 0.3807196863200844 + + {[QN]|[E{I|L}]|[KN]}NKK[KG]S{I|L} 2.6165 + + 145 + 1 2.623 52639.7 0.4199999868869781 79 2201 2280 DOHH2_400M_050219_1,2282 DOHH2_400M_050219_1,2282,EINKKGKSL True True EINKKGKSL 9.6871845 508.808734118938 338511.78125 2280.0 ENSG00000197323|ENST00000358465|TRIM33;;nc|ENSG00000197323|Q9UPN9-2|TRIM33 4.954749743143718 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2311 9.8122 800.0 94160.0 25 0 21188.0 -1 0 67 586.2704200171544 585.2631435505543 1 586.2706786990166 MULTI CID FTMS 0 0 0 2310 94236.6796875 0.4438135878400847 244 -2.261445999145508 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.623 61118.0 0.3799999952316284 80 2229 2310 DOHH2_400M_050219_1,2311 DOHH2_400M_050219_1,2311, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2314 9.8213 121.0 386140.0 25 0 47804.0 + -1 IQRLETMK 8 76 517.7866844083214 1033.5588158834428 2 517.7869140505791 MULTI CID FTMS 0 0 0 2313 361329.375 0.5735246368466963 -19 0.0889720916748046 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 1 T{M(Oxidation (M))|F}K 3 -1 31.031 0.0 0.0 3.0023 0.0 0.0 639.3712681312928 0.0 639.3712681312928 0.0 0.4529427553855214 0.0 0.0 0 0.805462187404089 0.0 0.0 0.3054621874040891 T{M(Oxidation (M))|F}K 3.0023 + + 62 + 1 2.623 42682.9 1.0 81 2231 2313 DOHH2_400M_050219_1,2314 DOHH2_400M_050219_1,2314,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2315 9.8351 800.0 69627.0 25 0 7875.8 + -1 LEGEESRMS 9 89 527.2289202373682 1052.4432875415364 2 527.2287475466728 MULTI CID FTMS 0 0 0 2313 61210.4765625 0.6212200044020925 -20 0.0928583145141601 2 Oxidation (M) _LEGEESRM(Oxidation (M))S_ ENSG00000167768|ENST00000252244|KRT1;P04264;ENSG00000189182|ENST00000341809|KRT77;Q7Z794;ENSEMBL:ENSBTAP00000038253;Q6IFZ6 29.84058131909904 0.1515068451768857 1 {I|L}EGEEEG[C(Carbamidomethyl (C))K] 9 -1 EG[C(Carbamidomethyl (C))K] + + 71.81 14.693 2.9852 6.8232 6.8232 62.663 0.0 0.0 0.0 49.53758884495025 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.7614393726401688 0.0 {I|L}EGEEEG[C(Carbamidomethyl (C))K] 6.8232 - 183 + 1 2.623 48926.6 0.3899999856948852 82 2231 2313 DOHH2_400M_050219_1,2315 DOHH2_400M_050219_1,2315,LEGEESRMS False False LEGEESRMS 9.8351148 527.228747546673 681669.0625 2313.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253;;Q6IFZ6 2.2239082722614207 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 2321 9.8677 800.0 206680.0 25 0 17663.0 22822 LRKRREQL 8 157 366.9003261451583 1097.6791490356748 3 366.9001953005791 MULTI CID FTMS 0 0 0 2320 106447.6484375 1.0 0 0.0 1 Unmodified _LRKRREQL_ ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC 8.745405648335112 0.7712480472641603 1 {I|L}Q{M(Oxidation (M))|F} 3 6 28.94 0.0 0.0 2.6365 0.0 0.0 0.0 706.4593069256213 706.4593069256213 12.486512420283232 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}Q{M(Oxidation (M))|F} 2.6365 - 70 + 1 2.623 132608.9 0.7400000095367432 83 2236 2320 DOHH2_400M_050219_1,2321 DOHH2_400M_050219_1,2321,LRKRREQL False True QEGDTTRKY 9.8677334 366.900195300579 346937.4375 2320.0 ENSG00000140396|ENST00000452400|NCOA2 2.209594468275706 3.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2325 9.8921 800.0 21700.0 25 0 1944.2 + -1 MPTCCMWNF 9 44 652.7330138221454 0 652.7330810427666 PEAK CID FTMS 0 0 0 2324 65120.17578125 0.3317560156525932 62 -0.5236778259277344 1 Acetyl (Protein N-term),2 Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))PTC(Carbamidomethyl (C))C(Carbamidomethyl (C))MWNF_ REV__ENST00000206595.10_1_14:31061530-31061584:+|nuORF 0.6014990680409731 0.3444685223463735 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.623 21261.4 0.3799999952316284 84 2239 2324 DOHH2_400M_050219_1,2325 DOHH2_400M_050219_1,2325,MPTCCMWNF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2329 9.9166 800.0 117280.0 25 0 27687.0 26956 PECERRPSICL 11 73 434.8822735406421 0 434.8826171755791 PEAK CID FTMS 0 0 0 2328 91272.96875 0.6458141102733118 23 -0.1518011093139648 1 Unmodified _PECERRPSICL_ ENST00000522621.1_2_8:62044343-62212351:+|nuORF 3.2813086475875832 0.4761840153648598 1 R 1 10 4.464 0.0 0.0 0.51443 0.0 0.0 433.52201060491865 275.1031893365844 708.6251999415031 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + R 0.51443 + + 4 + 1 2.623 78685.6 0.4399999976158142 85 2242 2328 DOHH2_400M_050219_1,2329 DOHH2_400M_050219_1,2329,PECERRPSICL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2332 9.9384 800.0 97027.0 25 0 8047.0 + 26405 NTDPNGPTHA 10 122 512.2280570283787 1022.4415611235572 2 512.2282592654228 MULTI CID FTMS 0 0 0 2331 81180.984375 0.1562179743986418 -28 0.1773157119750976 1 Unmodified _NTDPNGPTHA_ ENSG00000103365|ENST00000309859|GGA2 99.7552728972412 0.0086345419122624 1 {[QS]|[NT]}DPNGPTAH 10 2 + 75.956 0.0 0.0 7.4289 7.4289 94.844 0.0 0.0 0.0 59.770782704885406 12.066505629061446 12.066505629061446 17.219161359540152 0 0.805462187404089 1.6989700043360187 0.9456290139465237 0.805462187404089 {[QS]|[NT]}DPNGPTAH;{[QS]|[NT]}DPGGGPTAH;{[QS]|[NT]}YYGPTAH 7.4289;5.7448;3.4735 -;-;- 313 + 1 2.623 64232.9 0.4099999964237213 86 2244 2331 DOHH2_400M_050219_1,2332 DOHH2_400M_050219_1,2332,NTDPNGPTHA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2346 10.003 800.0 76634.0 25 0 6139.2 -1 NTMECVRYMFY 11 89 491.5397620921713 1471.597456876714 3 491.5396301150322 MULTI CID FTMS 0 0 0 2345 73421.078125 0.5594479085719565 -12 0.0482101440429687 1 Oxidation (M) _NTM(Oxidation (M))ECVRYMFY_ ENST00000544551.5_1_11:110101544-110101670:-|nuORF 2.6312355333042263 0.8627335947654684 1 HSWSHHHE 8 -1 54.576 0.0 0.0 3.7086 0.0 0.0 416.1680038899877 0.0 416.1680038899877 0.0 35.32441486490089 0.0 0.0 0 0.0 0.0 1.024227503252014 0.0 HSWSHHHE 3.7086 - 428 + 1 2.623 54509.4 0.4000000059604645 87 2257 2345 DOHH2_400M_050219_1,2346 DOHH2_400M_050219_1,2346,NTMECVRYMFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2350 10.027 800.0 36346.0 25 0 3327.2 -1 0 36 701.1380868854764 3500.6540520943818 5 701.3397704958916 MULTI CID FTMS 0 0 0 2349 12534.875 0.1716596182469763 1 -0.0163688659667968 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 2.623 29850.7 0.3400000035762787 88 2260 2349 DOHH2_400M_050219_1,2350 DOHH2_400M_050219_1,2350, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2353 10.044 580.0 151630.0 25 0 6033.1 37140 THPDQAEK 8 109 463.2223244299631 924.4300959267264 2 463.2214538455009 MULTI CID FTMS 0 0 0 2352 124064.828125 0.4004952429220351 -16 0.0888748168945312 1 Unmodified _THPDQAEK_ ENST00000546949.5_1_19:58514261-58515786:+|nuORF 37.97399986684836 0.2681860861828418 1 HVDAAEK 7 3 55.979 0.0 0.0 6.0555 0.0 0.0 156.05437197103134 0.0 156.05437197103134 0.0 33.96993224731084 0.0 0.0 0 2.055462187404089 0.0 0.4247425010840047 0.3252574989159953 HVDAAEK 6.0555 - 270 + 1 2.623 74757.6 1.0 89 2262 2352 DOHH2_400M_050219_1,2353 DOHH2_400M_050219_1,2353,THPDQAEK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2358 10.063 207.0 312170.0 25 0 34271.0 + 35973 SVQHVDAAEK 10 105 361.8526781384177 1082.536205015453 3 361.8524963259697 MULTI CID FTMS 0 0 0 2357 165956.078125 0.0046789233746164 -17 0.1015911102294921 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 21.59015148037692 0.4836074274810599 1 [VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK 11 8 + 29.812 0.0 0.0 2.7539 2.7539 72.842 0.0 0.0 0.0 9.978660691108669 6.8797168996667 6.8797168996667 4.771212547196626 0 0.6122731327798547 2.0 0.0 0.0 [VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;[VS]AG{M(Oxidation (M))|F}AA[Y{I|L}]GK;[WK]HVA{[CT]|[{M(Oxidation (M))|F}G]}APA;[WK]HVA[WQ]E;[VS]AV[C(Carbamidomethyl (C))S][Y{I|L}]GK;[{I|L}T][C(Carbamidomethyl (C))S]AV[{M(Oxidation (M))|F}T]GK;[{I|L}T]{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}[Y{I|L}]GK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}AV[{M(Oxidation (M))|F}T]GK;[WK]H[RN]{M(Oxidation (M))|F}[VP];[WK]HVA[C(Carbamidomethyl (C))S][VP] 2.7539;2.3131;1.2905;1.2769;1.1372;1.0641;1.0392;0.955;0.81974;0.69934 -;-;-;-;-;-;-;-;-;- 273 1 2.623 56168.3 1.0 90 2266 2357 DOHH2_400M_050219_1,2358 DOHH2_400M_050219_1,2358,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2361 10.079 539.0 186040.0 25 0 13543.0 + 35977 SVQHVDAAEK 10 106 542.2748844885149 1082.5352160438297 2 542.2759887576103 MULTI CID FTMS 0 0 0 2360 120790.1328125 0.006013056408097 -15 0.096074104309082 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 78.11562728322046 0.0186121335515026 1 [VS]QHVDAAEK 10 0 + 94.096 0.0 0.0 8.6921 8.6921 91.237 0.0 0.0 0.0 7.8387705964968575 7.8387705964968575 7.8387705964968575 7.8387705964968575 0 3.190614065464281 2.0 0.7614393726401688 0.7742275032520141 + + [VS]QHVDAAEK;[VS]AGHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAA[VS];[VS]QHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]QHVD[DV]GK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{M(Oxidation (M))|F}AEK;[HV]QSVDAAEK 8.6921;7.968;7.8456;6.9621;6.9023;6.3956;6.3391;6.246;6.1588;6.0664 +;-;-;-;-;-;-;-;-;- + 1835 + 1 2.623 81787.4 1.0 91 2268 2360 DOHH2_400M_050219_1,2361 DOHH2_400M_050219_1,2361,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2363 10.084 139.0 396030.0 25 0 44732.0 + -1 IQRLETMK 8 74 517.7866844083214 1033.5588158834428 2 517.7869140505791 MULTI CID FTMS 0 0 0 2362 419542.03125 0.6659234143766517 19 -0.2438802719116211 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 1 TT[YK]THR 7 -1 40.762 0.0 0.0 3.9439 0.0 0.0 128.0951100080094 0.0 128.0951100080094 0.0 1.31182901342207 0.0 0.0 0 0.5 0.0 0.7302046884880937 0.0 TT[YK]THR 3.9439 - 122 1 2.623 44644.8 1.0 92 2269 2362 DOHH2_400M_050219_1,2363 DOHH2_400M_050219_1,2363,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2367 10.109 800.0 87127.0 25 0 4825.2 + 38612 TTEQHGARY 9 106 531.7518488520118 1061.4891447708235 2 531.7521240115166 MULTI CID FTMS 0 0 0 2366 76568.0546875 0.7878829657429222 -6 0.0360832214355468 1 Unmodified _TTEQHGARY_ ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272047-33272452:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP 69.10491478415734 0.0214449631113747 1 TTEQHQRY 8 2 + 91.527 0.0 0.0 8.6225 8.6225 94.28 0.0 0.0 0.0 59.3575437029753 10.177287669604311 10.177287669604311 9.262137858390815 0 1.122363747448347 1.6989700043360187 0.4247425010840047 0.7742275032520141 TTEQHQRY;TTE[AG]HQRY;TTEQH[AG]RY;TTEQH[YR]Q;TTEQATVE[PS];TTE[AG]H[AG]RY;TTE[AG]H[YR]Q;TTEQAVTE[PS];TTEK[DG]VE[PS];TTEVTAEQ[PS] 8.6225;7.7499;7.7499;7.5995;7.3366;6.8824;6.727;6.6366;6.635;6.4702 -;-;+;-;-;-;-;-;-;- + 1168 + 1 2.623 59116.1 0.4000000059604645 93 2272 2366 DOHH2_400M_050219_1,2367 DOHH2_400M_050219_1,2367,TTEQHGARY True True TTEQHGARY 10.108551 531.752124011517 452599.375 2366.0 ENST00000480730.5_1_6:33272047-33272452:-|nuORF;;nc|ENSG00000231925|O15533-4|TAPBP;;nc|ENSG00000231925|O15533-3|TAPBP;;nc|ENSG00000231925|O15533-2|TAPBP;;ENSG00000231925|ENST00000434618|TAPBP 4.222011248270671 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2368 10.122 800.0 164840.0 25 0 19946.0 42817 VVLDNSGK 8 131 416.23226688558833 830.4499808379767 2 416.2317382693291 MULTI CID FTMS 0 0 0 2366 95224.3203125 0.0142656394602613 -36 0.2408065795898437 2 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 28.486842064014134 0.4448922141344407 1 VVSPASSGK 9 4 + 65.751 0.0 0.0 7.9175 7.9175 96.113 0.0 0.0 0.0 41.29217223162857 9.803143743442206 9.803143743442206 20.447083315661835 0 0.8494850021680094 2.0 0.6747425010840047 0.3054621874040891 VVSPASSGK;VVSP[RH]H;VVSE{[NV]|[RG]}GK;VVSE{[RE]|[WV]}{I|L};[PS]AS[SG]KVV;[DV]Q[SG]KVV;[TP]GS[SG]KVV;[VS][QT][QA]VV;[VS][DN]AKVV;[DV][NS]AKVV 7.9175;5.4554;5.4539;5.2201;2.382;1.3664;1.1127;1.1113;1.0517;0.99857 -;-;-;-;-;-;-;-;-;- 244 + 1 2.623 106689.5 0.8999999761581421 94 2272 2366 DOHH2_400M_050219_1,2368 DOHH2_400M_050219_1,2368,VVLDNSGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2375 10.159 800.0 133830.0 25 0 8733.8 35630 SVAMAEDRGNG 11 138 553.7467138542145 0 553.7475463747978 PEAK CID FTMS 0 0 0 2374 69753.1328125 0.8377150958337556 -27 0.1801033020019531 1 Unmodified _SVAMAEDRGNG_ ENSG00000168014|ENST00000334126|C2CD3;nc|ENSG00000168014|Q4AC94-1|C2CD3;nc|ENSG00000168014|Q4AC94-2|C2CD3;nc|ENSG00000168014|Q4AC94-3|C2CD3;nc|ENSG00000168014|Q4AC94-4|C2CD3 33.4449034751529 0.1938147417151705 1 NQAE{M(Oxidation (M))|F}QS 7 9 37.4 0.0 0.0 3.3832 0.0 0.0 146.0678773160476 152.04665552310783 298.11453283915546 0.0 0.0 0.0 0.0 0 0.5994850021680094 0.0 0.3252574989159953 0.2614393726401688 NQAE{M(Oxidation (M))|F}QS 3.3832 - 1218 + 1 2.623 84075.9 0.4000000059604645 95 2278 2374 DOHH2_400M_050219_1,2375 DOHH2_400M_050219_1,2375,SVAMAEDRGNG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2378 10.174 504.0 383190.0 25 0 31261.0 + 40351 VHQEAGEK 8 133 449.2249629810007 896.4353730288013 2 449.2249328494072 MULTI CID FTMS 0 0 0 2377 168635.203125 0.3940204875336131 -3 0.0245094299316406 1 Unmodified _VHQEAGEK_ REV__nc|ENSG00000112425|B3EWF7|EPM2A 43.85829265575387 0.1697421968005898 1 [AG]HVDAAEK 9 -1 + 70.65 0.0 0.0 7.8812 7.8812 87.691 0.0 0.0 0.0 36.34286745032816 20.285371682087217 20.285371682087217 4.771212547196626 0 0.8556270500406936 1.0969100130080565 0.3494850021680094 0.3807196863200844 [AG]HVDAAEK;[AG]HVADAEK;[AG]HVDAA{[VA]|[{I|L}G]}S;[AG]HVADA{[VA]|[{I|L}G]}S;[AG]HVAN{[QN]|[E{I|L}]|[KN]}S;[AG]HVDA[Q{I|L}]S;[AG]HVAD[Q{I|L}]S;[AG]HVAGG{[QN]|[E{I|L}]|[KN]}S;[AG][YR]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F} 7.8812;7.349;4.7209;4.1886;3.9332;3.9332;3.401;2.906;0.26847 -;-;-;-;-;-;-;-;- 820 + 1 2.623 150247.1 1.0 96 2280 2377 DOHH2_400M_050219_1,2378 DOHH2_400M_050219_1,2378,VHQEAGEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2379 10.181 357.0 114080.0 25 0 4376.9 + -1 MGYFCMAEK 9 82 568.7311356090081 1135.447718284816 2 568.7314941287041 MULTI CID FTMS 0 0 0 2377 113092.6171875 0.399858280364563 -5 0.0324630737304687 2 Carbamidomethyl (C) _MGYFC(Carbamidomethyl (C))MAEK_ REV__ENST00000607690.1_1_2:190531048-190531108:+|nuORF 10.073929032068715 0.563993802247229 1 AAEK 4 -1 26.023 0.0 0.0 2.2919 0.0 0.0 718.2246785893068 0.0 718.2246785893068 0.0 19.03364269964923 0.0 0.0 0 0.0 0.0 0.5 0.2887254899964357 AAEK 2.2919 - 59 + 1 2.623 34038.1 1.0 97 2280 2377 DOHH2_400M_050219_1,2379 DOHH2_400M_050219_1,2379,MGYFCMAEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2380 10.195 800.0 143780.0 25 0 9616.8 -1 GQTDMCRCSK 10 117 572.7311714527108 1143.4477899722217 2 572.7321044802666 MULTI CID FTMS 0 0 0 2377 106232.5390625 0.3285199743016498 -3 0.0245094299316406 3 Oxidation (M) _GQTDM(Oxidation (M))CRCSK_ ENSG00000118322|ENST00000327245|ATP10B 10.073929032068715 0.6785112666868882 1 H[DV]AAEK 7 -1 32.624 0.0 0.0 2.8531 0.0 0.0 375.0747563802277 0.0 375.0747563802277 0.0 14.444925830095553 0.0 0.0 0 0.0 0.0 0.5 0.3054621874040891 H[DV]AAEK 2.8531 - 892 + 1 2.623 90696.7 0.4799999892711639 98 2280 2377 DOHH2_400M_050219_1,2380 DOHH2_400M_050219_1,2380,GQTDMCRCSK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2382 10.203 223.0 203800.0 25 0 19969.0 + 26406 NTDPNGPTHA 10 78 512.2280570283787 1022.4415611235572 2 512.2283203005791 MULTI CID FTMS 0 0 0 2381 242081.90625 0.4658424053870301 9 -0.1358871459960937 1 Unmodified _NTDPNGPTHA_ ENSG00000103365|ENST00000309859|GGA2 43.77239144664712 0.1177314611616471 1 {[QS]|[NT]}DPNG[TP][HA] 10 0 + 56.7 0.0 0.0 5.5455 5.5455 88.692 0.0 0.0 0.0 47.72038431917139 2.04628427264403 2.04628427264403 13.4119644963393 0 0.5 1.6989700043360187 0.3807196863200844 0.4247425010840047 + + {[QS]|[NT]}DPNG[TP][HA];{[QS]|[NT]}DPGGG[TP][HA];{[QS]|[NT]}YYG[TP][HA] 5.5455;4.2338;2.5794 +;-;- + 106 + 1 2.551 45235.5 1.0 99 2281 2381 DOHH2_400M_050219_1,2382 DOHH2_400M_050219_1,2382,NTDPNGPTHA True True NTDPNGPTHA 10.202614 512.228320300579 5700458.0 2381.0 ENSG00000103365|ENST00000309859|GGA2 7.47888724009196 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2383 10.212 551.0 161070.0 25 0 9412.3 + 34583 SPHEAAVS 8 120 399.1929479190194 796.3713429048388 2 399.1926757693291 MULTI CID FTMS 0 0 0 2381 104590.3515625 0.5366989233681445 -4 0.0560331344604492 2 Unmodified _SPHEAAVS_ REV__ENST00000488290.5_1_10:30602540-30654262:-|nuORF;REV__nc|ENSG00000107951|Q9NVV4-2|MTPAP 15.847184025352805 0.6768015514314958 1 VDAAEQ 6 -1 38.58 0.0 0.0 4.8445 0.0 0.0 165.05427748847814 0.0 165.05427748847814 0.0 19.11597682053261 0.0 0.0 0 1.6184151806525389 0.0 0.0 0.0 VDAAEQ 4.8445 - 184 1 2.551 73436.3 1.0 100 2281 2381 DOHH2_400M_050219_1,2383 DOHH2_400M_050219_1,2383,SPHEAAVS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2384 10.225 732.0 223910.0 25 0 18028.0 + -1 APRQGPTEEK 10 154 385.531639989079 1153.573090567437 3 385.8658630251884 MULTI CID FTMS 0 0 0 2381 87790.90625 1.0 0 0.0 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))APRQGPTEEK_ REV__ENSG00000167978|ENST00000301740|SRRM2;REV__ENST00000575701.4_1_16:2806365-2807581:+|nuORF;REV__nc|ENSG00000167978|Q9UQ35-2|SRRM2;REV__nc|ENSG00000167978|Q9UQ35-3|SRRM2 14.838274106304384 0.5985701837916485 1 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 8 -1 47.163 0.0 0.0 4.0885 0.0 0.0 0.0 311.13700732798424 311.13700732798424 29.177557301061206 0.0 0.0 0.0 0 0.0 2.0 1.3001648626366045 0.3807196863200844 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 4.0885 - 1011 1 2.551 133382.1 1.0 101 2281 2381 DOHH2_400M_050219_1,2384 DOHH2_400M_050219_1,2384,APRQGPTEEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2387 10.245 800.0 173580.0 25 0 14255.0 + 24208 MAHMASKE 8 133 452.70428716563 903.39402139806 2 452.7044555544853 MULTI CID FTMS 0 0 0 2386 162904.21875 0.4159194703483139 -9 0.1019372940063476 1 Unmodified _MAHSPFSAG_ ENST00000432206.1_1_20:13373901-13374318:+|nuORF;ENST00000447427.2_1_1:120101380-120101404:-|nuORF;nc|ENSG00000111640|P04406-2|GAPDH;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;ENSG00000111640|ENST00000229239|GAPDH;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 26.268140514670165 0.1969607489560049 1 MAHMASKE 8 5 + 97.566 0.0 0.0 10.8 10.8 96.039 0.0 0.0 0.0 30.38918066030369 11.011552216949925 11.011552216949925 11.011552216949925 0 2.079689690656103 1.3979400086720375 0.5484550065040282 0.7742275032520141 MAHMASKE;MAHMASEK;MA{M(Oxidation (M))|F}KS{[CA]|SS}{M(Oxidation (M))|F};MAH[QP]{[CA]|SS}{M(Oxidation (M))|F};MA[YK]A{[CA]|SS}{M(Oxidation (M))|F};MAH[PG]A{[CA]|SS}{M(Oxidation (M))|F};MA{M(Oxidation (M))|F}K{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F};MA{M(Oxidation (M))|F}M[YN]K;MATS[RD]SH;MA{[{M(Oxidation (M))|F}C]|[YS]}HQ[PA] 10.8;9.581;6.3234;5.5696;4.8198;4.8169;4.5903;4.0938;3.5318;3.2756 -;-;-;-;-;-;-;-;-;- 816 + 1 2.551 109461.5 0.6700000166893005 102 2283 2386 DOHH2_400M_050219_1,2387 DOHH2_400M_050219_1,2387,MAHSPFSAG False False MAHMASKE 10.244758 452.704455554485 4128699.0 2386.0 ENST00000432206.1_1_20:13373901-13374318:+|nuORF;;ENST00000447427.2_1_1:120101380-120101404:-|nuORF;;nc|ENSG00000111640|P04406-2|GAPDH;;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;;ENSG00000111640|ENST00000229239|GAPDH;;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 9.782089869181316 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 2388 10.259 800.0 143160.0 25 0 22862.0 1170 AHMSGISA 8 172 387.18440917118994 772.3542654091799 2 387.1848022341728 MULTI CID FTMS 0 0 0 2386 132361.1875 0.7538709555412673 -11 0.1362266540527343 2 Unmodified _AHMSGISA_ ENST00000561040.1_1_19:47920653-47921004:-|nuORF 10.183394434864962 0.7604730176254005 1 [VS]A 3 6 23.16 0.0 0.0 2.9986 0.0 0.0 0.0 512.193138050058 512.193138050058 0.4911204548219174 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0968040358200661 0.0 [VS]A 2.9986 - 229 1 2.551 93677.3 0.6600000262260437 103 2283 2386 DOHH2_400M_050219_1,2388 DOHH2_400M_050219_1,2388,AHMSGISA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2389 10.272 800.0 65379.0 25 0 4554.9 + 7595 EINKKGKAL 9 91 500.81096453655925 999.6073761399184 2 500.8104736208916 MULTI CID FTMS 0 0 0 2386 96477.71875 1.0 0 0.0 3 Unmodified _EINKKGKAL_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 41.8396318013385 0.0653578398400075 1 {[QN]|[E{I|L}]|[KN]}NKK[KG]A{I|L} 9 0 {[QN]|[E{I|L}]|[KN]} + + 22.031 21.338 8.8128 2.2039 2.2039 49.082 0.0 0.0 0.0 0.0 8.535704163486049 0.0 0.0 0 0.9749073637206092 0.0 0.0 0.0 + + {[QN]|[E{I|L}]|[KN]}NKK[KG]A{I|L} 2.2039 + + 123 + 1 2.551 44413.8 0.6000000238418579 104 2283 2386 DOHH2_400M_050219_1,2389 DOHH2_400M_050219_1,2389,EINKKGKAL True True EINKKGKAL 10.272389 500.810473620892 364152.4375 2386.0 nc|ENSG00000122779|O15164-2|TRIM24;;ENSG00000122779|ENST00000343526|TRIM24 3.951614499092102 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2390 10.286 800.0 165940.0 25 0 18664.0 + -1 WHSCMKEK 8 108 561.2490580879554 1120.4835632427107 2 561.2496215701103 MULTI CID FTMS 0 0 0 2386 116993.40625 1.0 0 0.0 4 Carbamidomethyl (C),Oxidation (M) _WHSC(Carbamidomethyl (C))M(Oxidation (M))KEK_ REV__nc|ENSG00000127328|Q96QF0-5|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-6|RAB3IP 29.081581746732265 0.4323690340403521 1 E{[HG]|PP}[YC(Carbamidomethyl (C))]AEK 8 -1 50.573 0.0 0.0 4.5135 0.0 0.0 128.09511149142628 0.0 128.09511149142628 0.0 25.8807485893402 0.0 0.0 0 2.610924374808178 0.0 1.3494850021680094 0.2887254899964357 E{[HG]|PP}[YC(Carbamidomethyl (C))]AEK 4.5135 - 151 + 1 2.551 107507.9 0.6299999952316284 105 2283 2386 DOHH2_400M_050219_1,2390 DOHH2_400M_050219_1,2390,WHSCMKEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2393 10.3 413.0 268250.0 25 0 31056.0 + 19388 LERRHVQY 8 109 367.5356258855487 1099.585048256846 3 367.5356017947197 MULTI CID FTMS 0 0 0 2392 195655.59375 0.5155642713832048 -13 0.1976594924926757 1 Unmodified _LERRHVQY_ ENST00000436105.1_1_7:43549553-43549670:-|nuORF 13.50788311687929 0.7113601687236069 1 {I|L}E 2 6 25.217 0.0 0.0 2.2933 0.0 0.0 0.0 854.4363220258247 854.4363220258247 9.018637558036673 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 + {I|L}E 2.2933 + + 43 + 1 2.475 94805.8 1.0 106 2285 2392 DOHH2_400M_050219_1,2393 DOHH2_400M_050219_1,2393,LERRHVQY False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2394 10.314 800.0 195180.0 25 0 17592.0 37141 THPDQAEK 8 137 463.2223244299631 924.4300959267264 2 463.2223693728447 MULTI CID FTMS 0 0 0 2392 156810.53125 0.5062020618964375 7 -0.0483741760253906 2 Unmodified _THPDQAEK_ ENST00000546949.5_1_19:58514261-58515786:+|nuORF 30.63653989081413 0.3996269429323407 1 HVDAAEK 7 3 51.992 0.0 0.0 5.6242 0.0 0.0 156.0534992878632 0.0 156.0534992878632 0.0 29.992369838338465 0.0 0.0 0 1.9361818737241727 0.0 0.3494850021680094 0.3252574989159953 HVDAAEK 5.6242 - 412 + 1 2.475 123058.7 0.75 107 2285 2392 DOHH2_400M_050219_1,2394 DOHH2_400M_050219_1,2394,THPDQAEK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2396 10.318 1.9 28481000.0 25 0 5382600.0 + 35974 SVQHVDAAEK 10 66 361.8526781384177 1082.536205015453 3 361.8528320193291 MULTI CID FTMS 0 0 0 2395 26794826.0 0.7554464958839952 3 -0.0130834579467773 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 1 [VS]AGHVDAAEK 11 2 [VS]AG + + 42.415 24.57 7.8209 3.9181 3.9181 52.986 0.0 0.0 0.0 0.0 16.684435887728668 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3494850021680094 [VS]AGHVDAAEK 3.9181 - 205 + 1 2.475 52567.9 1.0 108 2286 2395 DOHH2_400M_050219_1,2396 DOHH2_400M_050219_1,2396,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2398 10.323 3.9 14544000.0 25 0 1362300.0 + 35978 SVQHVDAAEK 10 75 542.2748844885149 1082.5352160438297 2 542.2756835818291 MULTI CID FTMS 0 0 0 2397 15084852.0 0.7509393679084443 4 -0.0163192749023437 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 1 [VS]QHVDAAEK 10 0 + 116.76 0.0 0.0 10.786 10.786 93.737 0.0 0.0 0.0 95.79480348684784 18.081597033474424 18.081597033474424 9.164539485499262 0 2.809894379144197 2.0 0.8494850021680094 0.805462187404089 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAA[VS];WQH{[RE]|[WV]}AEK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[VS]QHVDAAA[VS];W[AG]H{[RE]|[WV]}AEK;[VS][AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[VS]AGHVDA[SG][{I|L}A];[VS]AGHVD[DV]GK 10.786;9.9396;7.7795;7.2302;7.2247;6.8459;6.3746;6.3741;6.3266;6.2668 +;-;-;-;-;-;-;-;-;- + 853 + 1 2.475 51029.5 1.0 109 2287 2397 DOHH2_400M_050219_1,2398 DOHH2_400M_050219_1,2398,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2408 10.37 800.0 42458.0 25 0 15163.0 + -1 CQEQIKCCEME 11 51 510.8624505206381 0 510.8621703982353 PEAK CID FTMS 0 0 0 2407 54664.21875 0.6361145864830627 6 -0.0749835968017578 1 3 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))QEQIKC(Carbamidomethyl (C))C(Carbamidomethyl (C))EM(Oxidation (M))E_ REV__ENST00000464249.1_1_6:170068797-170070787:-|nuORF 0.4545168274142398 0.4761840153648598 1 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.53785 0.0 0.0 362.3934668598325 507.2216280572876 869.61509491712 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.53785 + + 2 + 1 2.45 38029.0 0.4600000083446502 110 2296 2407 DOHH2_400M_050219_1,2408 DOHH2_400M_050219_1,2408,CQEQIKCCEME False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2410 10.375 22.0 2597900.0 25 0 509190.0 + 42942 VVSPKSQS 8 74 416.23226688558833 830.4499808379767 2 416.2322265505791 MULTI CID FTMS 0 0 0 2409 3109511.25 0.4658386244664392 -11 0.0570096969604492 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 20.453626601364224 0.6087503291685402 1 VVSPASS[KG] 9 4 + 65.789 0.0 0.0 7.9221 7.9221 97.439 0.0 0.0 0.0 29.937750619495105 4.632547827699213 4.632547827699213 41.62473222280053 0 0.7742275032520141 2.0 0.4247425010840047 0.3054621874040891 VVSPASS[KG];[PS]ASS[KG]VV;[VG]{[DA]|[EG]}S[KG]VV 7.9221;2.9098;0.47061 -;-;- 119 + 1 2.45 50752.1 1.0 111 2297 2409 DOHH2_400M_050219_1,2410 DOHH2_400M_050219_1,2410,VVSPKSQS False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2413 10.396 800.0 107840.0 25 0 28489.0 -1 LFRTPLCPP 9 73 550.7994136113645 1099.5842742895288 2 550.7994872927666 MULTI CID FTMS 0 0 0 2412 70144.0078125 0.8221048366605548 -2 0.0088090896606445 1 Carbamidomethyl (C) _LFRTPLC(Carbamidomethyl (C))PP_ ENST00000265340.11_1_5:134364111-134364312:-|nuORF 6.723162845929126 0.6799819581413107 1 E{I|L} 2 -1 20.969 0.0 0.0 1.907 0.0 0.0 839.4445492438556 0.0 839.4445492438556 0.0 20.96910013008056 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L} 1.907 - 2 1 2.45 70333.6 0.4300000071525574 112 2299 2412 DOHH2_400M_050219_1,2413 DOHH2_400M_050219_1,2413,LFRTPLCPP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2416 10.406 231.0 353720.0 25 0 68839.0 -1 EKLQKNMK 8 73 517.7866273300856 1033.558701726971 2 517.7870361208916 MULTI CID FTMS 0 0 0 2415 330447.34375 0.1702620998581459 -20 0.20489501953125 1 Oxidation (M) _EKLQKNM(Oxidation (M))K_ ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST 9.347437153973935 0.7675937258251505 1 KT[RH][WP]K 7 -1 21.201 0.0 0.0 2.0513 0.0 0.0 82.00828956959658 0.0 82.00828956959658 0.0 8.437084621982258 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.3252574989159953 KT[RH][WP]K 2.0513 - 48 + 1 2.45 68299.1 1.0 113 2301 2415 DOHH2_400M_050219_1,2416 DOHH2_400M_050219_1,2416,EKLQKNMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2417 10.42 800.0 99698.0 25 0 12703.0 + -1 EQMLNEAEK 9 120 554.253575517408 1106.4925981016158 2 554.2529174685478 MULTI CID FTMS 0 0 0 2415 80863.140625 0.3593412037543331 17 -0.1894340515136718 2 Oxidation (M) _EQM(Oxidation (M))LNEAEK_ REV__ENSG00000185745|ENST00000371804|IFIT1;REV__nc|ENSG00000185745|P09914-2|IFIT1 19.361941925380144 0.3125782356748823 1 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAC(Carbamidomethyl (C))WSTH 9 -1 + 36.64 0.0 0.0 3.3114 3.3114 69.313 0.0 0.0 0.0 5.017346757967552 5.017346757967552 5.017346757967552 1.0526595187979382 0 0.8296896906561032 0.0 0.2302046884880938 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAC(Carbamidomethyl (C))WSTH;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAC(Carbamidomethyl (C))WTSH;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QADDAAEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NAE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SH;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AA[CG]WSTH;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{[MG]|[TS]}WSTH;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ATDG[SG]STH;[AG]NT[NP]YE{[QN]|[E{I|L}]|[KN]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N{[MG]|[TS]}WSTH;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NAEEQQN 3.3114;3.2162;2.8579;2.6047;2.4792;2.4739;2.4406;2.4375;2.4278;2.4202 -;-;-;-;-;-;-;-;-;- 1828 + 1 2.45 65594.5 0.449999988079071 114 2301 2415 DOHH2_400M_050219_1,2417 DOHH2_400M_050219_1,2417,EQMLNEAEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2418 10.429 501.0 158220.0 25 0 98129.0 + -1 VGAHCMYVYAV 11 42 614.7770485618581 0 614.7767822146416 PEAK CID FTMS 0 0 0 2415 134467.34375 0.2371286772964028 103 -0.8992815017700195 3 Oxidation (M) _VGAHCM(Oxidation (M))YVYAV_ REV__L1PA3_dup5653|chr8:134272831-134273084:+|6.651383941580287|0.0005263323012381|13.63|48.0|12|2|anti-sense 1.4819007175156935 0.4761840153648598 1 M 1 -1 2.2185 0.0 0.0 0.18073 0.0 0.0 649.1647405789912 444.3127840631469 1093.4775246421382 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.18073 + + 2 + 1 2.45 63518.8 1.0 115 2301 2415 DOHH2_400M_050219_1,2418 DOHH2_400M_050219_1,2418,VGAHCMYVYAV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2420 10.447 800.0 197270.0 25 0 12456.0 + + 29270 QHVDAAEK 8 127 449.2249629810007 896.4353730288013 2 449.2255432009697 MULTI CID FTMS 0 0 0 2419 84487.078125 0.1974062301121503 19 -0.1906375885009765 1 Unmodified _QHVAAEDK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.63653989081413 0.3996269429323407 1 QHVDAAEK 8 -1 + 60.117 0.0 0.0 6.7063 6.7063 82.338 0.0 0.0 0.0 38.42555777386394 18.711827458464256 18.711827458464256 2.430380486862944 0 0.7000612056866314 0.0 0.3494850021680094 0.3807196863200844 QHVDAAEK;QHVADAEK;Q[YR]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F};[RH]AT[C(Carbamidomethyl (C))R]P 6.7063;6.4351;0.64106;0.42554 -;-;-;- 430 + 1 2.45 125124.1 0.4799999892711639 116 2302 2419 DOHH2_400M_050219_1,2420 DOHH2_400M_050219_1,2420,QHVAAEDK False False QHVDAAEK 10.446678 449.22554320097 3462695.25 2419.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 7.105567932128906 2.0 False 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 2421 10.461 800.0 128820.0 25 0 8498.3 25403 NEADAWREY 9 129 577.2467874611735 1152.479021989147 2 577.2476684451103 MULTI CID FTMS 0 0 0 2419 99379.09375 0.3016428805442855 -14 0.1064205169677734 2 Unmodified _NEADAWREY_ ENST00000541972.5_1_12:7651687-7653742:-|nuORF 19.256988751693697 0.3154191944385105 1 [AG]N[HN]EAQQ 9 9 50.626 0.0 0.0 4.3928 0.0 0.0 0.0 200.0686874707749 200.0686874707749 28.72964398058661 0.0 0.0 0.0 0 0.5 2.0 0.7302046884880937 0.3252574989159953 [AG]N[HN]EAQQ 4.3928 - 715 1 2.45 82597.4 0.4199999868869781 117 2302 2419 DOHH2_400M_050219_1,2421 DOHH2_400M_050219_1,2421,NEADAWREY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2422 10.471 572.0 303730.0 25 0 15835.0 + 13162 HFRHKSQL 8 192 351.5297700055647 1051.5674806168945 3 351.5298644900322 MULTI CID FTMS 0 0 0 2419 98274.453125 0.3886685217345307 -17 0.1391534805297851 3 Unmodified _HFRHKSQL_ ENSG00000113916|ENST00000406870|BCL6;ENSG00000161940|ENST00000293805|BCL6B;nc|ENSG00000113916|P41182-2|BCL6 16.942295170755138 0.6606234159769251 1 [VG]{[{M(Oxidation (M))|F}H]|[RQ]}HKSE 8 5 24.307 0.0 0.0 2.3115 0.0 0.0 0.0 127.08721112363152 127.08721112363152 7.129070689390954 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 [VG]{[{M(Oxidation (M))|F}H]|[RQ]}HKSE 2.3115 - 1398 1 2.45 140145.0 1.0 118 2302 2419 DOHH2_400M_050219_1,2422 DOHH2_400M_050219_1,2422,HFRHKSQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2423 10.484 800.0 41348.0 25 0 1380.0 -1 0 46 777.3471505387749 3881.6993703608746 5 777.5503417849541 MULTI CID FTMS 0 0 0 2419 57645.125 1.0 0 0.0 4 1 {I|L} 1 -1 11.99 0.0 0.0 0.30888 0.0 0.0 1965.8574611198328 1799.767019655873 3765.624480775705 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 0.30888 - 9 + 1 2.45 30637.5 0.3300000131130218 119 2302 2419 DOHH2_400M_050219_1,2423 DOHH2_400M_050219_1,2423, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2425 10.493 319.0 187930.0 25 0 14193.0 + 34584 SPHEAAVS 8 103 399.1929479190194 796.3713429048388 2 399.1928588747978 MULTI CID FTMS 0 0 0 2424 157960.484375 0.8105644606052675 18 -0.1352701187133789 1 Unmodified _SPHEAAVS_ REV__ENST00000488290.5_1_10:30602540-30654262:-|nuORF;REV__nc|ENSG00000107951|Q9NVV4-2|MTPAP 12.531546534597751 0.7257836412119636 1 VDAAEK 6 -1 56.336 0.0 0.0 7.0741 0.0 0.0 165.0498840198763 0.0 165.0498840198763 0.0 43.86168767277148 0.0 0.0 0 2.3494850021680094 0.0 0.7742275032520141 0.3494850021680094 VDAAEK 7.0741 - 89 + 1 2.45 54958.3 1.0 120 2303 2424 DOHH2_400M_050219_1,2425 DOHH2_400M_050219_1,2425,SPHEAAVS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2426 10.503 578.0 181170.0 25 0 65127.0 + 19769 LGRKREAA 8 88 450.7721465769052 899.5297402206104 2 450.7721740603447 MULTI CID FTMS 0 0 0 2424 131006.03125 0.7914141184837 -3 0.0888118743896484 2 Unmodified _LGRKREAA_ REV__ENSG00000143079|ENST00000271277|CTTNBP2NL 19.438996006549623 0.6237395211498085 1 {[VA]|[{I|L}G]}R 3 -1 19.398 0.0 0.0 2.1564 0.0 0.0 0.0 570.2999177931291 570.2999177931291 6.92348741261036 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.0 0.0 {[VA]|[{I|L}G]}R 2.1564 + + 49 1 2.45 87716.1 1.0 121 2303 2424 DOHH2_400M_050219_1,2426 DOHH2_400M_050219_1,2426,LGRKREAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2428 10.52 777.0 104590.0 25 0 8224.1 24209 MAHSPFSAG 9 112 452.70428716563 903.39402139806 2 452.7044250369072 MULTI CID FTMS 0 0 0 2427 113426.5390625 0.2895953610797286 12 -0.0779647827148437 1 Unmodified _MAHSPFSAG_ ENST00000381365.3_1_17:4804421-4804538:+|nuORF 20.41453444215458 0.284085796332423 1 MAHMASKE 8 5 + 88.102 0.0 0.0 9.7523 9.7523 98.287 0.0 0.0 0.0 71.67178264381798 16.524174299985006 16.524174299985006 25.78508689054182 0 1.9291746928241125 1.5228787452803376 0.25 0.6747425010840047 MAHMASKE;MA{M(Oxidation (M))|F}KS{[CA]|SS}{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}HMASKE;MAH[QP]{[CA]|SS}{M(Oxidation (M))|F};MAH[KC][VS]E;MA{M(Oxidation (M))|F}K{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}HSK{M(Oxidation (M))|F}[PS];{[DS]|[MA]|[CV]|TT}HS{[DS]|[MA]|[CV]|TT}KE;[HM]AMASKE;[HA]MMASKE 9.7523;6.8981;6.5966;5.7765;5.7156;5.1649;5.0632;4.7596;4.7486;4.2205 -;-;-;-;-;-;-;-;-;- 359 + 1 2.45 69733.5 1.0 122 2304 2427 DOHH2_400M_050219_1,2428 DOHH2_400M_050219_1,2428,MAHSPFSAG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2436 10.55 186.0 335410.0 25 0 39320.0 19466 LFFRIQNY 8 87 367.5356258855487 1099.585048256846 3 367.5353881716728 MULTI CID FTMS 0 0 0 2435 188455.875 0.4965925789293174 13 -0.1011714935302734 1 Unmodified _LFFRIQNY_ ENST00000484018.1_1_2:219339589-219341676:-|nuORF 11.640296217721598 0.738950129755968 1 {I|L}E 2 7 20.969 0.0 0.0 1.907 0.0 0.0 0.0 854.4357446350389 854.4357446350389 7.870156338638594 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E 1.907 - 29 + 1 2.45 55949.8 1.0 123 2311 2435 DOHH2_400M_050219_1,2436 DOHH2_400M_050219_1,2436,LFFRIQNY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2440 10.575 800.0 95469.0 25 0 4886.4 -1 STDKQMGY 8 124 473.20261166804806 944.390670402896 2 473.2024413943291 MULTI CID FTMS 0 0 0 2439 103758.78125 0.638603876189804 -62 0.5918722152709961 1 Oxidation (M) _STDKQM(Oxidation (M))GY_ ENSG00000084623|ENST00000677711|EIF3I 36.04419817259434 0.3004715606373109 1 [VG]SQTS 6 -1 33.844 0.0 0.0 3.5837 0.0 0.0 0.0 382.1065877215087 382.1065877215087 13.516160029892568 0.0 0.0 0.0 0 0.2614393726401688 2.0 1.110924374808178 0.0 [VG]SQTS 3.5837 - 385 1 2.45 64627.4 0.4300000071525574 124 2314 2439 DOHH2_400M_050219_1,2440 DOHH2_400M_050219_1,2440,STDKQMGY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2442 10.58 22.0 2527400.0 25 0 431260.0 + 35975 SVQHVDAAEK 10 80 361.8526781384177 1082.536205015453 3 361.8524352908134 MULTI CID FTMS 0 0 0 2441 2288316.0 0.0645161981524074 32 -0.2142925262451172 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 1 [VS]AG{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK 11 6 + 46.036 0.0 0.0 4.2526 4.2526 82.458 0.0 0.0 0.0 4.680669581183885 18.4835914101183 4.680669581183885 9.261463995014232 0 0.7117581349478641 2.0 0.25 0.0 [VS]AG{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK;[VS]A[{M(Oxidation (M))|F}E]AQ{M(Oxidation (M))|F}GK;[VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;[VS][{M(Oxidation (M))|F}E]AAQ{M(Oxidation (M))|F}GK;[VS]AG{M(Oxidation (M))|F}AA[Y{I|L}]GK;[VS]A[{M(Oxidation (M))|F}E]A[AG]{M(Oxidation (M))|F}GK;[VS][{M(Oxidation (M))|F}E]AA[AG]{M(Oxidation (M))|F}GK;[WK]HVA{[CT]|[{M(Oxidation (M))|F}G]}A[PA] 4.2526;3.3971;3.3548;3.1662;3.0767;2.5505;2.3196;1.4654 -;-;-;-;-;-;-;- 405 1 2.45 55044.9 1.0 125 2315 2441 DOHH2_400M_050219_1,2442 DOHH2_400M_050219_1,2442,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2443 10.581 45.0 1142800.0 25 0 82037.0 + 35979 SVQHVDAAEK 10 77 542.2748844885149 1082.5352160438297 2 542.2753173708916 MULTI CID FTMS 0 0 0 2441 1165055.5 0.0579976549155574 32 -0.2142925262451172 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 62.89396527753397 0.0289947886078699 1 [VS]QHVDAAEK 10 0 + 104.39 0.0 0.0 9.6432 9.6432 91.912 0.0 0.0 0.0 86.43175948177209 18.521825181113627 18.521825181113627 7.92719286378599 0 2.9291746928241125 2.0 0.5 0.8494850021680094 + + [VS]QHVDAAEK;[VS]QHVADAEK;[VS][AG]HVDAAEK;[VS][AG]HVADAEK;[VS]AGHVD[DV]GK;WQH{[RE]|[WV]}AEK;[VS]Q{M(Oxidation (M))|F}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]QHVD[DV]GK;WQHVA{M(Oxidation (M))|F}GA[PA];W[AG]H{[RE]|[WV]}AEK 9.6432;8.9109;8.7966;8.0643;6.6108;6.2498;6.0008;5.7366;5.3956;5.3942 +;-;-;-;-;-;-;-;-;- + 638 + 1 2.45 44455.5 1.0 126 2315 2441 DOHH2_400M_050219_1,2443 DOHH2_400M_050219_1,2443,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2448 10.602 348.0 222940.0 25 0 74608.0 + 5253 DKGKQHHVNAY 11 76 432.8852339571389 0 432.8852111697197 PEAK CID FTMS 0 0 0 2447 258226.59375 0.8905572544209118 65 -0.5169200897216797 1 Unmodified _DKGKQHHVNAY_ REV__ENSG00000181036|ENST00000368106|FCRL6;REV__nc|ENSG00000181036|Q6DN72-2|FCRL6;REV__nc|ENSG00000181036|Q6DN72-3|FCRL6;REV__nc|ENSG00000181036|Q6DN72-4|FCRL6 2.6312355333042263 0.4761840153648598 1 K 1 -1 5.4846 0.0 0.0 0.63497 0.0 0.0 238.44702933830268 494.18808923892817 732.6351185772309 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.63497 + + 5 + 1 2.45 69481.6 1.0 127 2319 2447 DOHH2_400M_050219_1,2448 DOHH2_400M_050219_1,2448,DKGKQHHVNAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2449 10.616 800.0 159570.0 25 0 9864.0 16048 ITKTSLLQEV 10 154 377.8927421998709 1130.6563971998123 3 377.8923217654228 MULTI CID FTMS 0 0 0 2447 79137.9375 0.5220417317737859 -9 0.0526742935180664 2 Unmodified _ITKTSLLQEV_ ENST00000529943.6_1_16:31765215-31765368:+|nuORF 14.218169984304629 0.6089749286722269 1 H[Q{I|L}]EV 5 6 24.437 0.0 0.0 2.1613 0.0 0.0 506.333299705275 0.0 506.333299705275 0.0 11.962724883926654 0.0 0.0 0 0.0 0.0 0.5 0.5 H[Q{I|L}]EV 2.1613 - 125 1 2.45 104742.7 0.3400000035762787 128 2319 2447 DOHH2_400M_050219_1,2449 DOHH2_400M_050219_1,2449,ITKTSLLQEV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2452 10.626 218.0 312640.0 25 0 31048.0 + 41915 VQGGACRG 8 93 374.18189640936953 746.3492398855391 2 374.1819335818291 MULTI CID FTMS 0 0 0 2451 119051.109375 0.6434334835131418 -31 0.2892227172851562 1 Unmodified _VQGGACRG_ REV__ENST00000306729.11_2_17:79973003-79974861:+|nuORF;REV__ENST00000583693.5_1_17:79974628-79975195:+|nuORF;REV__ENST00000585140.1_1_17:79974120-79974861:+|nuORF 0.7936320650641473 0.8195151834710337 1 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 1.9567 0.0 0.0 581.2701058296782 0.0 581.2701058296782 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.9567 - 17 + 1 2.45 61331.8 1.0 129 2321 2451 DOHH2_400M_050219_1,2452 DOHH2_400M_050219_1,2452,VQGGACRG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2453 10.637 591.0 163530.0 25 0 12574.0 + 30438 RDSFSAEK 8 115 470.2302632546381 938.4459735760762 2 470.2305480837822 MULTI CID FTMS 0 0 0 2451 101602.0703125 0.1090473460163581 -28 0.277435302734375 2 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 24.020572477871973 0.5389365498350341 1 HVDAAEK 7 -1 65.716 0.0 0.0 7.0026 0.0 0.0 170.0701951094979 0.0 170.0701951094979 0.0 35.84560277754156 0.0 0.0 0 2.4916440611282624 0.0 0.4247425010840047 0.2887254899964357 HVDAAEK 7.0026 - 348 + 1 2.45 76436.8 1.0 130 2321 2451 DOHH2_400M_050219_1,2453 DOHH2_400M_050219_1,2453,RDSFSAEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2455 10.641 14.0 3478300.0 25 0 748040.0 42818 VVLDNSGK 8 56 416.23226688558833 830.4499808379767 2 416.2322265505791 MULTI CID FTMS 0 0 0 2454 4344882.0 0.6509106067228383 14 -0.1032466888427734 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 23.1484247019978 0.5573009939494978 1 VVSPASS[KG] 9 4 + 67.584 0.0 0.0 8.1383 8.1383 98.254 0.0 0.0 0.0 44.16772480037345 5.629005157155831 5.629005157155831 67.58409987942095 0 0.7742275032520141 2.0 0.4247425010840047 0.3252574989159953 VVSPASS[KG] 8.1383 - 80 + 1 2.45 44355.8 1.0 131 2322 2454 DOHH2_400M_050219_1,2455 DOHH2_400M_050219_1,2455,VVLDNSGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2458 10.662 800.0 127540.0 25 0 9513.6 5101 DHPAFPSQWLL 11 115 437.5570099702436 1309.6492005109308 3 437.5573608279228 MULTI CID FTMS 0 0 0 2457 71892.921875 0.69062057353148 -1 0.0040626525878906 1 Unmodified _DHPAFPSQWLL_ ENST00000439174.6_1_17:63008779-63008878:-|nuORF 11.494710602746466 0.7960433852372589 1 D{I|L}[RD]DH 6 10 45.718 0.0 0.0 3.4909 0.0 0.0 0.0 555.300398749486 555.300398749486 32.22357194224834 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 D{I|L}[RD]DH 3.4909 - 111 + 1 2.45 86953.2 0.3799999952316284 132 2324 2457 DOHH2_400M_050219_1,2458 DOHH2_400M_050219_1,2458,DHPAFPSQWLL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2460 10.667 32.0 1807500.0 25 0 361520.0 36964 TFEHLFIK 8 66 517.7866273300856 1033.558701726971 2 517.7870361208916 MULTI CID FTMS 0 0 0 2459 1682504.375 0.8669058272858866 4 -0.0169916152954101 1 Unmodified _TFEHLFIK_ ENSG00000116678|ENST00000349533|LEPR 9.347437153973935 0.7675937258251505 1 {M(Oxidation (M))|F}K 2 6 16.995 0.0 0.0 1.6443 0.0 0.0 740.4178763869305 0.0 740.4178763869305 0.0 6.308422131034844 0.0 0.0 0 0.0 0.0 0.0 0.2302046884880938 {M(Oxidation (M))|F}K 1.6443 - 17 + 1 2.45 50545.1 1.0 133 2325 2459 DOHH2_400M_050219_1,2460 DOHH2_400M_050219_1,2460,TFEHLFIK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2465 10.695 800.0 67268.0 25 0 3371.8 + 6847 EEDSSGHTRAY 11 87 626.2649056047366 1250.515258276273 2 626.2649413943291 MULTI CID FTMS 0 0 0 2464 77856.5859375 0.894903688444544 1 -0.0163774490356445 1 Unmodified _EEDSSGHTRAY_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 28.23362336080872 0.4292685378469897 1 EEDSSGHT{[QV]|[N{I|L}]|[RA]|[KV]}Y 11 0 + 69.456 0.0 0.0 5.5542 5.5542 83.182 0.0 0.0 0.0 24.357285695614365 6.610378512872998 6.610378512872998 6.610378512872998 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + + EEDSSGHT{[QV]|[N{I|L}]|[RA]|[KV]}Y;EEDSSGHT[VP]GH;EEDSSGH[VS][PA]H;EE{[C(Carbamidomethyl (C))E]|[WC]}GHT{[QV]|[N{I|L}]|[RA]|[KV]}Y;[HT]{[VA]|[{I|L}G]}THGSSD[HC];EE[WC(Carbamidomethyl (C))]HT{[QV]|[N{I|L}]|[RA]|[KV]}Y;EE{[C(Carbamidomethyl (C))E]|[WC]}GHT[VP]GH;[HT]{[VA]|[{I|L}G]}THGSSC[HD];EE[WC(Carbamidomethyl (C))]HT[VP]GH;EEDS[KT][WY]GH 5.5542;5.0256;4.1484;3.7696;3.2713;3.2473;3.2382;2.7511;2.7123;2.2309 +;-;-;-;-;-;-;-;-;- + 204 + 1 2.45 45935.8 0.949999988079071 134 2329 2464 DOHH2_400M_050219_1,2465 DOHH2_400M_050219_1,2465,EEDSSGHTRAY False True EEDSSGHTRAY 10.695197 626.264941394329 502360.0 2464.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-2|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 8.591581662495932 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2468 10.716 800.0 89372.0 25 0 5152.0 + -1 GQGRCTAMWS 10 108 577.2467874611735 1152.479021989147 2 577.2473632693291 MULTI CID FTMS 0 0 0 2467 127040.0859375 0.3856015990967021 15 -0.0858736038208007 1 Carbamidomethyl (C) _GQGRC(Carbamidomethyl (C))TAMWS_ REV__ENST00000258796.11_1_7:2702399-2703008:+|nuORF 13.90604991867851 0.6142120002215601 1 [AG]N[HN]EAQQ 9 -1 41.903 0.0 0.0 3.6359 0.0 0.0 0.0 200.06853549916573 200.06853549916573 31.30688992849956 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3807196863200844 0.3252574989159953 [AG]N[HN]EAQQ 3.6359 - 359 1 2.45 59793.0 0.4699999988079071 135 2331 2467 DOHH2_400M_050219_1,2468 DOHH2_400M_050219_1,2468,GQGRCTAMWS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2470 10.728 552.0 243340.0 25 0 11937.0 20110 LKESSRYGL 9 167 351.5297700055647 1051.5674806168945 3 351.5297119021416 MULTI CID FTMS 0 0 0 2469 130657.4765625 0.5167410924639624 13 -0.0654325485229492 1 Unmodified _LKESSRYGL_ ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH 19.256988751693697 0.3154191944385105 1 {I|L}EH 3 7 20.802 0.0 0.0 1.9782 0.0 0.0 0.0 669.3534639947874 669.3534639947874 6.822581265925436 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}EH 1.9782 - 536 + 1 2.45 110470.6 1.0 136 2332 2469 DOHH2_400M_050219_1,2470 DOHH2_400M_050219_1,2470,LKESSRYGL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2480 10.769 350.0 252320.0 25 0 67091.0 36092 SVRSPTPYKK 10 101 388.2255088619006 1161.6546971859018 3 388.2265502810478 MULTI CID FTMS 0 0 0 2479 85484.109375 0.1004385272446088 -21 0.1444711685180664 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 15.248480904072842 0.5916873121453583 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 40.877 9.469 2.206 3.5188 3.5188 51.791 0.0 0.0 0.0 0.0 30.49819219999207 0.0 0.0 0 0.805462187404089 0.0 0.7059771852360797 0.1050541008457974 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 3.5188 - 138 + 1 2.45 76622.5 1.0 137 2341 2479 DOHH2_400M_050219_1,2480 DOHH2_400M_050219_1,2480,SVRSPTPYKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2488 10.809 800.0 164520.0 25 0 38516.0 27994 PMFFFLSMLAM 11 78 667.8225873493276 1333.630621765455 2 667.8234741091728 MULTI CID FTMS 0 0 0 2487 92508.734375 0.0538315008347459 -17 0.0938253402709961 1 Unmodified _PMFFFLSMLAM_ ENSG00000181616|ENST00000322653|OR52H1 5.296884461304476 0.8501568894076437 1 AM 2 9 16.454 0.0 0.0 1.2337 0.0 0.0 1113.533006736525 0.0 1113.533006736525 0.0 0.9691001300805624 0.0 0.0 0 0.0 0.0 0.0 0.0 + AM 1.2337 + + 12 1 2.45 96639.4 0.3899999856948852 138 2348 2487 DOHH2_400M_050219_1,2488 DOHH2_400M_050219_1,2488,PMFFFLSMLAM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2491 10.818 35.0 1636200.0 25 0 247520.0 + 28185 PQDESISFQQR 11 78 445.5508480455029 1333.6307147367088 3 445.5509826540947 MULTI CID FTMS 0 0 0 2490 1197590.25 0.1309210099103288 -15 0.0777244567871093 1 Unmodified _PQDESISFQQR_ REV__ENSG00000169184|ENST00000302326|MN1 4.897010918128616 0.8520435188433833 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F} + + 22.384 8.3716 1.2508 1.6784 1.6784 48.678 0.0 0.0 0.0 0.0 11.237125054200234 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 1.6784 - 96 + 1 2.45 50929.5 1.0 139 2350 2490 DOHH2_400M_050219_1,2491 DOHH2_400M_050219_1,2491,PQDESISFQQR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2492 10.832 800.0 83483.0 25 0 4248.2 + 35349 STDKQMGY 8 107 473.20261166804806 944.390670402896 2 473.2031127810478 MULTI CID FTMS 0 0 0 2490 100428.96875 0.6181098886557583 -26 0.1680641174316406 2 Oxidation (M) _STDKQM(Oxidation (M))GY_ ENSG00000084623|ENST00000677711|EIF3I 42.09456458481378 0.1992492688217789 1 AATQTGY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 9 7 + 45.103 0.0 0.0 4.7758 4.7758 80.893 0.0 0.0 0.0 7.133619065286467 3.1550757248622574 3.1550757248622574 7.133619065286467 0 0.25 0.638272163982407 0.6307196863200843 0.25 AATQTGY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MG]|[TS]}DKQ{M(Oxidation (M))|F}GY;AAT[AG]TGY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QD]|[EN]|[WG]|[KD]|[RS]}QTGY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MG]|[TS]}DK[AG]{M(Oxidation (M))|F}GY;[SG]VQTGY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TGY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[SG]V[AG]TGY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 4.7758;4.0205;3.5361;3.414;3.0397;2.5676;2.4333;1.3279 -;+;-;-;-;-;-;- + 356 1 2.45 59826.2 0.4399999976158142 140 2350 2490 DOHH2_400M_050219_1,2492 DOHH2_400M_050219_1,2492,STDKQMGY False False STDKQMGY 10.832134 473.203112781048 24971012.34375 2490.0 ENSG00000084623|ENST00000677711|EIF3I 6.876939137776692 2.0 True 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 2494 10.837 46.0 1288600.0 25 0 214980.0 + 35976 SVQHVDAAEK 10 89 361.8526781384177 1082.536205015453 3 361.8524047732353 MULTI CID FTMS 0 0 0 2493 991826.5 0.027963303585173 68 -0.6434612274169922 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 1 [VS]QHVDAAEK 10 0 [VS]Q + + 40.213 22.447 7.1452 3.7147 3.7147 52.36 0.0 0.0 0.0 0.0 6.601453825417487 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3252574989159953 + + [VS]QHVDAAEK 3.7147 + + 452 + 1 2.45 56295.6 1.0 141 2351 2493 DOHH2_400M_050219_1,2494 DOHH2_400M_050219_1,2494,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2495 10.839 101.0 557360.0 25 0 43845.0 + 35980 SVQHVDAAEK 10 79 542.2748844885149 1082.5352160438297 2 542.2751342654228 MULTI CID FTMS 0 0 0 2493 552896.4375 0.0275237504017328 68 -0.6434612274169922 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 1 [VS]QHVDAAEK 10 0 + 111.42 0.0 0.0 10.293 10.293 93.214 0.0 0.0 0.0 90.45548148589354 17.201140738196017 17.201140738196017 9.164539485499247 0 2.841129063296272 2.0 0.7614393726401688 0.805462187404089 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAA[VS];[VS]QHVDAAA[VS];[VS]AGHVWA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[VS]QHVWA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]AGHVD[DV]GK;[VS]QHVD[DV]GK;[VS]AGHVD{[NV]|[RG]}[VS] 10.293;9.4463;7.5001;7.0072;6.6084;6.1228;5.9927;5.9008;5.4113;5.2067 +;-;-;-;-;-;-;-;-;- + 873 + 1 2.45 49212.5 1.0 142 2351 2493 DOHH2_400M_050219_1,2495 DOHH2_400M_050219_1,2495,SVQHVDAAEK True True SVQHVDAAEK 10.839106 542.275134265423 1218621480.0 2493.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 11.918370564778646 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2496 10.845 312.0 220300.0 25 0 153680.0 + -1 VGNGMLQHIMF 11 41 631.8036713659012 0 631.8036987185478 PEAK CID FTMS 0 0 0 2493 259645.28125 0.085410755815866 170 -1.5713157653808594 3 Oxidation (M) _VGNGM(Oxidation (M))LQHIMF_ REV__ENSG00000128285|ENST00000249016|MCHR1 1.4819007175156935 0.4761840153648598 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.45 54372.9 1.0 143 2351 2493 DOHH2_400M_050219_1,2496 DOHH2_400M_050219_1,2496,VGNGMLQHIMF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2504 10.885 800.0 49438.0 25 0 1783.3 -1 0 85 926.4304430084286 1850.846333083657 2 926.4307739138604 MULTI CID FTMS 0 0 0 2503 76621.265625 0.3646527888597605 -8 0.0554533004760742 1 1 VSGGG[RD] 7 -1 29.429 0.0 0.0 1.59 0.0 0.0 1204.5508141401008 0.0 1204.5508141401008 0.0 11.012677457556292 0.0 0.0 0 0.0 0.0 0.0 1.6989700043360187 VSGGG[RD] 1.59 - 4151 + 1 2.45 33339.9 0.3700000047683716 144 2358 2503 DOHH2_400M_050219_1,2504 DOHH2_400M_050219_1,2504, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2505 10.888 113.0 732770.0 25 0 153040.0 6000 DRWGSGGQ 8 84 431.695343310756 861.3761336883119 2 431.6954528689384 MULTI CID FTMS 0 0 0 2503 411205.78125 0.1908240453711201 -25 0.1411342620849609 2 Unmodified _DRWGSGGQ_ ENST00000577783.2_1_17:77079170-77080166:+|nuORF 4.3292370932331545 0.7980541185046766 1 DD 2 7 23.711 0.0 0.0 2.7527 0.0 0.0 0.0 628.2990481605334 628.2990481605334 7.452315297631706 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DD 2.7527 - 5 + 1 2.45 68282.7 1.0 145 2358 2503 DOHH2_400M_050219_1,2505 DOHH2_400M_050219_1,2505,DRWGSGGQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2506 10.902 800.0 115160.0 25 0 15729.0 -1 VRLKEDMKK 9 93 581.8340059257652 1161.6534589183302 2 581.8347656130791 MULTI CID FTMS 0 0 0 2503 111877.8203125 0.8107585054745767 -9 0.0595216751098632 3 Oxidation (M) _VRLKEDM(Oxidation (M))KK_ ENSG00000138640|ENST00000264344|FAM13A 17.11289562659939 0.3734572693229295 1 T{M(Oxidation (M))|F}KK 4 -1 41.23 0.0 0.0 3.5492 0.0 0.0 639.3688922766249 0.0 639.3688922766249 0.0 16.967517035949644 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}KK 3.5492 - 107 1 2.45 73613.9 0.4699999988079071 146 2358 2503 DOHH2_400M_050219_1,2506 DOHH2_400M_050219_1,2506,VRLKEDMKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2508 10.907 137.0 358080.0 25 0 55761.0 42819 VVLDNSGK 8 75 416.23226688558833 830.4499808379767 2 416.2321044802666 MULTI CID FTMS 0 0 0 2507 388605.125 0.0582172767153065 51 -0.501063346862793 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 16.942295170755138 0.6606234159769251 1 VVSPASS[KG] 9 4 + 55.556 0.0 0.0 6.6899 6.6899 93.827 0.0 0.0 0.0 40.07515625508539 4.494011517474519 4.494011517474519 22.21848749616356 0 0.7742275032520141 2.0 0.0 0.2742275032520141 VVSPASS[KG];VVSE{[NV]|[RG]}[KG] 6.6899;4.0144 -;- 102 + 1 2.45 44884.0 1.0 147 2359 2507 DOHH2_400M_050219_1,2508 DOHH2_400M_050219_1,2508,VVLDNSGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2509 10.909 117.0 496150.0 25 0 45479.0 31808 RSYAADEK 8 78 470.2302632546381 938.4459735760762 2 470.2303039431572 MULTI CID FTMS 0 0 0 2507 458830.21875 0.4924527371627473 10 -0.0685701370239257 2 Unmodified _RSYAADEK_ ENSG00000185760|ENST00000370398|KCNQ5;nc|ENSG00000185760|Q9NR82-2|KCNQ5;nc|ENSG00000185760|Q9NR82-3|KCNQ5;nc|ENSG00000185760|Q9NR82-4|KCNQ5;nc|ENSG00000185760|Q9NR82-5|KCNQ5;nc|ENSG00000185760|Q9NR82-6|KCNQ5;nc|ENSG00000185760|Q9NR82-7|KCNQ5 24.020572477871973 0.5389365498350341 1 HVDAAEK 7 4 69.958 0.0 0.0 7.4547 0.0 0.0 170.0699991918719 0.0 170.0699991918719 0.0 34.0673434290172 0.0 0.0 0 2.5356668758921828 0.0 0.4247425010840047 0.2887254899964357 HVDAAEK 7.4547 - 233 + 1 2.45 53294.7 1.0 148 2359 2507 DOHH2_400M_050219_1,2509 DOHH2_400M_050219_1,2509,RSYAADEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2512 10.93 800.0 170760.0 25 0 10913.0 + 7923 ELQRRHEQM 9 150 409.53991499562585 1225.5979155870775 3 409.5400573611259 MULTI CID FTMS 0 0 0 2511 114107.3828125 0.4443027054388334 -8 0.0644950866699218 1 Unmodified _ELQRRHEQM_ ENSG00000122545|ENST00000350320|SEPTIN7;nc|ENSG00000122545|Q16181-2|SEPTIN7 51.41523569358685 0.0372669606867193 1 HEQM 4 5 37.155 0.0 0.0 3.0316 0.0 0.0 682.3901234357437 0.0 682.3901234357437 0.0 12.245462655597096 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.4247425010840047 + HEQM 3.0316 + + 226 1 2.45 110680.2 0.4300000071525574 149 2361 2511 DOHH2_400M_050219_1,2512 DOHH2_400M_050219_1,2512,ELQRRHEQM True True ELQRRHEQM 10.929716 409.540057361126 838914.5 2511.0 ENSG00000122545|ENST00000350320|SEPTIN7;;nc|ENSG00000122545|Q16181-2|SEPTIN7 5.706669807434082 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2517 10.958 800.0 83277.0 25 0 13289.0 -1 0 52 945.4026626462322 1888.7907723592643 2 945.4019653201104 MULTI CID FTMS 0 0 0 2516 54412.421875 0.5195641378186734 -4 0.0283765792846679 1 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}Q{M(Oxidation (M))|F}GY 8 -1 28.505 0.0 0.0 1.5092 0.0 0.0 0.0 959.3884035450644 959.3884035450644 23.02046884880937 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}Q{M(Oxidation (M))|F}GY 1.5092 - 55 1 2.45 48754.6 0.3700000047683716 150 2365 2516 DOHH2_400M_050219_1,2517 DOHH2_400M_050219_1,2517, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2526 11.001 730.0 103900.0 25 0 8450.1 + 28864 QAKKHPSL 8 105 454.769304696737 907.524056460274 2 454.7693054080009 MULTI CID FTMS 0 0 0 2525 107210.21875 0.8388667038412075 -3 0.0120182037353515 1 Unmodified _QAKKHPSL_ ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF 25.399314129420983 0.5099049743284904 1 [QA]KKH{I|L}[PS] 8 2 + 34.835 0.0 0.0 3.8385 3.8385 69.692 0.0 0.0 0.0 16.98970004336018 0.2287874528033739 0.2287874528033739 0.2287874528033739 0 0.1923877696554315 1.0 1.1307196863200843 0.0 [QA]KKH{I|L}[PS];[QA]KKHP{[TV]|[{I|L}S]};[QA]K[{I|L}P][KS]H 3.8385;3.8133;0.30902 -;+;- + 161 + 1 2.45 63802.6 1.0 151 2373 2525 DOHH2_400M_050219_1,2526 DOHH2_400M_050219_1,2526,QAKKHPSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2529 11.022 800.0 128320.0 25 0 16853.0 -1 IRAPTTMK 8 120 467.2629477673476 932.5113426014952 2 467.2629272341728 MULTI CID FTMS 0 0 0 2528 105302.546875 0.3366079122123503 -21 0.1525964736938476 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 22.736283301280096 0.5659792798204337 1 T{M(Oxidation (M))|F}K 3 -1 36.484 0.0 0.0 3.9125 0.0 0.0 538.3210482673139 0.0 538.3210482673139 0.0 13.521052209143178 0.0 0.0 0 1.305462187404089 0.0 0.0 0.3252574989159953 T{M(Oxidation (M))|F}K 3.9125 + + 154 + 1 2.45 82269.7 0.4199999868869781 152 2375 2528 DOHH2_400M_050219_1,2529 DOHH2_400M_050219_1,2529,IRAPTTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2531 11.027 83.0 667780.0 25 0 80886.0 36093 SVRSPTPYKK 10 78 388.2255088619006 1161.6546971859018 3 388.2254821658134 MULTI CID FTMS 0 0 0 2530 655886.3125 0.7706257425975235 14 -0.1232824325561523 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 15.248480904072842 0.5916873121453583 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 35.399 15.177 3.5359 3.0473 3.0473 50.556 0.0 0.0 0.0 0.0 23.945247061488857 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 3.0473 - 114 + 1 2.45 53417.0 1.0 153 2376 2530 DOHH2_400M_050219_1,2531 DOHH2_400M_050219_1,2531,SVRSPTPYKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2535 11.051 800.0 111650.0 25 0 19425.0 -1 VPDSAVCM 8 114 439.692856359011 877.371159784822 2 439.6931945681572 MULTI CID FTMS 0 0 0 2534 71583.5390625 0.7318904950335137 1 -0.0163555145263671 1 Carbamidomethyl (C) _VPDSAVC(Carbamidomethyl (C))M_ ENSG00000171596|ENST00000305141|NMUR1 5.230669730166228 0.792582437072536 1 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 1.6645 0.0 0.0 712.2919341762267 0.0 712.2919341762267 0.0 -0.8804562952784067 -0.8804562952784067 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.6645 + + 55 + 1 2.45 75749.6 0.4300000071525574 154 2379 2534 DOHH2_400M_050219_1,2535 DOHH2_400M_050219_1,2535,VPDSAVCM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2537 11.056 107.0 566110.0 25 0 145330.0 -1 RRMCWICPR 9 31 667.8225873493276 1333.630621765455 2 667.8229858279228 MULTI CID FTMS 0 0 0 2536 436812.8125 0.2541845312184497 15 -0.1454343795776367 1 2 Carbamidomethyl (C) _RRMC(Carbamidomethyl (C))WIC(Carbamidomethyl (C))PR_ ENST00000323813.3_1_18:649936-657924:-|nuORF;ENST00000585033.1_1_18:641450-657900:-|nuORF 1.844237919475145 0.850302753031785 1 R 1 -1 15.485 0.0 0.0 1.1611 0.0 0.0 1159.518971230102 0.0 1159.518971230102 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.1611 + + 2 + 1 2.45 48360.9 1.0 155 2380 2536 DOHH2_400M_050219_1,2537 DOHH2_400M_050219_1,2537,RRMCWICPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2538 11.07 800.0 94220.0 25 0 10639.0 + 19199 LEGEESRMSGE 11 89 620.261222960202 1238.5078929872038 2 620.2618286013603 MULTI CID FTMS 0 0 0 2536 84562.7265625 0.0789185323198813 -19 0.137613296508789 2 Oxidation (M) _LEGEESRM(Oxidation (M))SGE_ CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__Q7Z794;ENSG00000167768|ENST00000252244|KRT1;ENSG00000189182|ENST00000341809|KRT77 70.92866715596459 0.0297132693151486 1 {I|L}EGEES 6 5 81.916 0.0 0.0 6.6141 0.0 0.0 0.0 591.2204683893186 591.2204683893186 49.70159303405956 0.0 0.0 0.0 0 1.3494850021680094 2.0 1.1421590589602533 0.0 + {I|L}EGEES 6.6141 + + 722 + 1 2.45 61175.8 0.3899999856948852 156 2380 2536 DOHH2_400M_050219_1,2538 DOHH2_400M_050219_1,2538,LEGEESRMSGE True False LEGEESRMSGE 11.069884 620.26182860136 9580023.0 2536.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253 8.531457424163818 2.0 True 11.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 2540 11.075 19.0 2342200.0 25 0 243310.0 8339 ERRDVCWSQR 10 78 445.5508480455029 1333.6307147367088 3 445.5509826540947 MULTI CID FTMS 0 0 0 2539 2115378.0 0.2312539068367429 16 -0.1344795227050781 1 Unmodified _ERRDVCWSQR_ ENSG00000168056|ENST00000301873|LTBP3;nc|ENSG00000168056|Q9NS15-2|LTBP3 9.38312468134398 0.6832340498775793 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F} + + 33.418 10.713 1.6007 2.5058 2.5058 49.51 0.0 0.0 0.0 0.0 18.279550148593486 0.0 0.0 0 0.0 0.0 0.0 0.75 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 2.5058 - 157 + 1 2.45 42460.1 1.0 157 2381 2539 DOHH2_400M_050219_1,2540 DOHH2_400M_050219_1,2540,ERRDVCWSQR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2542 11.091 800.0 83886.0 25 0 4040.1 35350 STDKQMGY 8 105 473.20261166804806 944.390670402896 2 473.2021972537041 MULTI CID FTMS 0 0 0 2541 86401.0546875 0.5317723258273596 6 -0.0616378784179687 1 Oxidation (M) _STDKQM(Oxidation (M))GY_ ENSG00000084623|ENST00000677711|EIF3I 48.345845343767074 0.1470278396477103 1 AATQTS{M(Oxidation (M))|F}GY 9 5 + 55.988 0.0 0.0 5.9284 5.9284 86.238 0.0 0.0 0.0 8.996294548824366 6.949689600073441 6.949689600073441 8.996294548824366 0 1.0682503180159344 0.5528419686577808 1.16944517631652 0.0 AATQTS{M(Oxidation (M))|F}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}QTS{M(Oxidation (M))|F}GY;AAT[AG]TS{M(Oxidation (M))|F}GY;AATTQS{M(Oxidation (M))|F}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TS{M(Oxidation (M))|F}GY;{[MG]|[TS]}D[KQ]{M(Oxidation (M))|F}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}TQS{M(Oxidation (M))|F}GY;AATT[AG]S{M(Oxidation (M))|F}GY;{[MG]|[TS]}GVQS{M(Oxidation (M))|F}GY;AATQT[YG]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 5.9284;4.9758;4.9534;4.6277;3.9951;3.7072;3.6751;3.6527;3.5735;3.3123 -;-;-;-;-;+;-;-;-;- + 1055 1 2.45 57724.3 0.4300000071525574 158 2382 2541 DOHH2_400M_050219_1,2542 DOHH2_400M_050219_1,2542,STDKQMGY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2544 11.097 80.0 639190.0 25 0 97879.0 + 35981 SVQHVDAAEK 10 76 361.8525750091936 1082.535895627781 3 361.8523437380791 MULTI CID FTMS 0 0 0 2543 599029.1875 0.9083013791217236 7 -0.0541353225708007 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 1 HVDAAEK 7 3 41.733 0.0 0.0 3.8551 0.0 0.0 314.159644532096 0.0 314.159644532096 0.0 18.34321706376656 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.3252574989159953 + HVDAAEK 3.8551 + + 174 + 1 2.45 48482.7 1.0 159 2383 2543 DOHH2_400M_050219_1,2544 DOHH2_400M_050219_1,2544,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2545 11.102 270.0 263530.0 25 0 23258.0 + 35982 SVQHVDAAEK 10 84 542.2749336556631 1082.535314378126 2 542.2753173708916 MULTI CID FTMS 0 0 0 2543 276858.0625 0.7601425174234294 6 -0.0500726699829101 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 1 [VS]QHVDAAEK 10 0 + 109.24 0.0 0.0 10.091 10.091 93.564 0.0 0.0 0.0 88.88160999694966 16.77440017027358 16.77440017027358 9.164539485499262 0 2.9604093769761874 2.0 0.8807196863200843 0.8252574989159953 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVWAAW;[VS]AGHVDAAA[VS];[VS]QHVD[DV]GK;[VS]QHVWAAW;[VS]QHVDAAA[VS];[VS][AG]HVD[DV]GK;[VS]AGHVD[DV]GK;[VS]AGHVD{[NV]|[RG]}[VS] 10.091;9.2443;8.3994;8.2779;8.0884;7.4955;7.3666;7.2418;6.9437;6.0659 +;-;-;-;-;-;-;-;-;- + 855 + 1 2.45 58128.1 1.0 160 2383 2543 DOHH2_400M_050219_1,2545 DOHH2_400M_050219_1,2545,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2546 11.11 459.0 187090.0 25 0 15771.0 35636 SVAQVFLNNY 10 108 385.5316928175595 1153.5732490528785 3 385.5313598513603 MULTI CID FTMS 0 0 0 2543 112415.625 0.6062671878298262 -10 0.1047954559326171 3 Unmodified _SVAQVFLNNY_ ENSG00000196415|ENST00000234347|PRTN3 13.90604991867851 0.6142120002215601 1 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 8 5 40.934 0.0 0.0 3.5485 0.0 0.0 0.0 311.13849998815994 311.13849998815994 26.158197815704085 0.0 0.0 0.0 0 0.0 2.0 0.2742275032520141 0.4247425010840047 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 3.5485 - 306 1 2.45 71839.8 1.0 161 2383 2543 DOHH2_400M_050219_1,2546 DOHH2_400M_050219_1,2546,SVAQVFLNNY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2550 11.132 685.0 98602.0 25 0 4769.2 + 7187 EEQENGKAY 9 104 534.2356439954294 1066.4567350576588 2 534.2363159060478 MULTI CID FTMS 0 0 0 2549 99260.8984375 0.507410965023718 -18 0.1515312194824218 1 Unmodified _EEQENGKAY_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 39.957323273325 0.0756908302845263 1 ENGKAY 6 3 28.581 0.0 0.0 2.68 0.0 0.0 386.14303007008624 0.0 386.14303007008624 0.0 -0.627079396816498 -0.627079396816498 0.0 0 0.0 0.0 0.4247425010840047 0.0 + ENGKAY 2.68 + + 392 + 1 2.45 57937.9 1.0 162 2386 2549 DOHH2_400M_050219_1,2550 DOHH2_400M_050219_1,2550,EEQENGKAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2553 11.141 31.0 2012100.0 25 0 492330.0 6001 DRWGSGGQ 8 53 431.695343310756 861.3761336883119 2 431.6954223513603 MULTI CID FTMS 0 0 0 2552 1976796.25 0.9173515414904206 5 -0.0396432876586914 1 Unmodified _DRWGSGGQ_ ENST00000577783.2_1_17:77079170-77080166:+|nuORF 4.3292370932331545 0.7980541185046766 1 D[WR]RDD 6 5 + 24.398 0.0 0.0 2.8324 2.8324 81.914 0.0 0.0 0.0 11.32093263955939 0.6863623584101219 0.6863623584101219 24.397737521010825 0 0.3494850021680094 0.0 0.4247425010840047 0.0 D[WR]RDD 2.8324 - 15 + 1 2.45 55134.1 1.0 163 2388 2552 DOHH2_400M_050219_1,2553 DOHH2_400M_050219_1,2553,DRWGSGGQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2556 11.162 800.0 78695.0 25 0 7339.0 -1 0 46 499.25598515860696 1992.994834768028 4 499.5063659548759 MULTI CID FTMS 0 0 0 2555 52284.734375 0.6927870273197865 1 -0.0163545608520507 1 1 H 1 -1 13.979 0.0 0.0 0.70143 0.0 0.0 1837.92525271412 0.0 1837.92525271412 0.0 0.0269751594335314 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.70143 - 29 + 1 2.45 57665.5 0.3799999952316284 164 2390 2555 DOHH2_400M_050219_1,2556 DOHH2_400M_050219_1,2556, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2558 11.167 135.0 359340.0 25 0 28284.0 9798 FPANYAEK 8 71 470.2302719723895 938.445991011579 2 470.2301818728447 MULTI CID FTMS 0 0 0 2557 363002.46875 0.8898643333830764 6 -0.0428504943847656 1 Unmodified _FPANYAEK_ CON__ENSEMBL:ENSBTAP00000001528;ENSG00000205726|ENST00000381318|ITSN1;nc|ENSG00000205726|Q15811-10|ITSN1;nc|ENSG00000205726|Q15811-11|ITSN1;nc|ENSG00000205726|Q15811-12|ITSN1;nc|ENSG00000205726|Q15811-13|ITSN1;nc|ENSG00000205726|Q15811-2|ITSN1;nc|ENSG00000205726|Q15811-3|ITSN1;nc|ENSG00000205726|Q15811-4|ITSN1;nc|ENSG00000205726|Q15811-5|ITSN1;nc|ENSG00000205726|Q15811-6|ITSN1;nc|ENSG00000205726|Q15811-7|ITSN1;nc|ENSG00000205726|Q15811-8|ITSN1;nc|ENSG00000205726|Q15811-9|ITSN1 15.847184025352805 0.6768015514314958 1 HVDAAEK 7 5 67.727 0.0 0.0 7.217 0.0 0.0 170.07015567200636 0.0 170.07015567200636 0.0 60.49549192918029 0.0 0.0 0 2.1989700043360187 0.0 0.4247425010840047 0.3054621874040891 HVDAAEK 7.217 - 218 + 1 2.45 45454.6 1.0 165 2391 2557 DOHH2_400M_050219_1,2558 DOHH2_400M_050219_1,2558,FPANYAEK False False False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 2559 11.172 277.0 222690.0 25 0 27684.0 + 42943 VVSPKSQS 8 98 416.23214173057977 830.4497305279596 2 416.2320434451103 MULTI CID FTMS 0 0 0 2557 209600.625 0.9340434727480136 2 -0.0144367218017578 2 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 20.453626601364224 0.6087503291685402 1 VVSPASSGK 9 4 + 54.408 0.0 0.0 6.5516 6.5516 88.223 0.0 0.0 0.0 37.49668131245279 5.986446888048107 5.986446888048107 9.080306233405295 0 0.805462187404089 2.0 0.4247425010840047 0.3054621874040891 VVSPASSGK;VVSPYV[PA];VVSE{[NV]|[RG]}GK;[VS][QT][QA]VV 6.5516;5.4582;5.1757;0.15211 -;-;-;- 126 + 1 2.45 54558.9 1.0 166 2391 2557 DOHH2_400M_050219_1,2559 DOHH2_400M_050219_1,2559,VVSPKSQS False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2563 11.196 800.0 78298.0 25 0 3447.3 + 6310 DVHLWIDEK 9 89 577.7936739217758 1153.5727949103516 2 577.7936889529228 MULTI CID FTMS 0 0 0 2562 76692.9140625 0.9246729233416804 1 -0.0163955688476562 1 Unmodified _DVHLWIDEK_ REV__ENSG00000132437|ENST00000444124|DDC;REV__nc|ENSG00000132437|P20711-2|DDC;REV__nc|ENSG00000132437|P20711-3|DDC;REV__nc|ENSG00000132437|P20711-4|DDC 20.453626601364224 0.2830276176381075 1 [VS]AGHVD{[NV]|[RG]}A[VS] 12 -1 + 64.809 0.0 0.0 5.6181 5.6181 87.786 0.0 0.0 0.0 9.334968608350842 30.75434074769753 9.334968608350842 9.66643630850708 0 2.3494850021680094 2.0 0.3054621874040891 0.0 [VS]AGHVD{[NV]|[RG]}A[VS];[VS]QHVD{[NV]|[RG]}A[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVD{[NV]|[RG]}A[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVD{[RE]|[WV]}GK;[VS]A[RH]D{[NV]|[RG]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DAAAEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[NV]|[RG]}DVS{[MS]|[{M(Oxidation (M))|F}A]}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{[NV]|[RG]}EK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[NV]|[RG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RH]D{[NV]|[RG]}A[VS] 5.6181;4.7801;3.7248;3.5191;3.44;2.8125;2.3591;2.3392;2.1434;1.8589 -;-;-;-;-;-;-;-;-;- 326 1 2.45 50470.3 0.3899999856948852 167 2394 2562 DOHH2_400M_050219_1,2563 DOHH2_400M_050219_1,2563,DVHLWIDEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2569 11.229 800.0 194350.0 25 0 15176.0 16430 KAAGQALK 8 126 393.7451968126441 785.4758406920882 2 393.7451354861259 MULTI CID FTMS 0 0 0 2568 94111.0546875 0.8049652626868975 2 -0.0342311859130859 1 Unmodified _KAAGQALK_ ENSG00000007516|ENST00000426824|BAIAP3;nc|ENSG00000007516|O94812-2|BAIAP3;nc|ENSG00000007516|O94812-3|BAIAP3;nc|ENSG00000007516|O94812-5|BAIAP3;nc|ENSG00000007516|O94812-7|BAIAP3;nc|ENSG00000007516|O94812|BAIAP3 12.531546534597751 0.7257836412119636 1 K 1 7 26.237 0.0 0.0 3.3403 0.0 0.0 639.3702936723602 0.0 639.3702936723602 0.0 8.278324880759484 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 + K 3.3403 + + 58 + 1 2.45 123980.4 0.4199999868869781 168 2399 2568 DOHH2_400M_050219_1,2569 DOHH2_400M_050219_1,2569,KAAGQALK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2570 11.243 800.0 149510.0 25 0 17313.0 + 1243 AIKKKDEL 8 111 472.79247106485127 943.5703891965026 2 472.7923766970634 MULTI CID FTMS 0 0 0 2568 94543.84375 0.0930393852604159 -11 0.0761890411376953 2 Unmodified _AIKKKDEL_ ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF 49.93300154707207 0.1395624531867191 1 {I|L}AKK[C(Carbamidomethyl (C))S]K 7 5 70.265 0.0 0.0 7.4468 0.0 0.0 0.0 125.07216821842032 125.07216821842032 51.77062918686282 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.1549471895720984 0.4247425010840047 {I|L}AKK[C(Carbamidomethyl (C))S]K 7.4468 - 402 + 1 2.45 95060.9 0.4300000071525574 169 2399 2568 DOHH2_400M_050219_1,2570 DOHH2_400M_050219_1,2570,AIKKKDEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2574 11.268 800.0 169220.0 25 0 10021.0 + 4826 DEYDLEGNVK 10 136 394.5143181511834 1180.5211250537502 3 394.5150634646416 MULTI CID FTMS 0 0 0 2573 99220.1953125 1.0 0 0.0 1 Unmodified _DEYDLEGNVK_ REV__ENSG00000204965|ENST00000529859|PCDHA5;REV__nc|ENSG00000204965|Q9Y5H7-2|PCDHA5;REV__nc|ENSG00000204965|Q9Y5H7-3|PCDHA5 7.477065608646677 0.69205068831198 1 Y 1 -1 17.302 0.0 0.0 1.4656 0.0 0.0 999.447255280116 0.0 999.447255280116 0.0 0.2680249241196719 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 Y 1.4656 + + 75 + 1 2.45 108822.9 0.3499999940395355 170 2402 2573 DOHH2_400M_050219_1,2574 DOHH2_400M_050219_1,2574,DEYDLEGNVK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2576 11.277 307.0 200980.0 25 0 29432.0 -1 RGILAEMK 8 82 467.2629477673476 932.5113426014952 2 467.2630493044853 MULTI CID FTMS 0 0 0 2575 183988.921875 0.5881351277862432 7 -0.1341304779052734 1 Oxidation (M) _RGILAEM(Oxidation (M))K_ ENSG00000169105|ENST00000306243|CHST14 16.942295170755138 0.6606234159769251 1 {M(Oxidation (M))|F}K 2 -1 26.211 0.0 0.0 2.8108 0.0 0.0 639.3702263836601 0.0 639.3702263836601 0.0 11.506375246153906 0.0 0.0 0 0.5 0.0 0.0 0.3252574989159953 {M(Oxidation (M))|F}K 2.8108 + + 44 + 1 2.45 52291.3 1.0 171 2403 2575 DOHH2_400M_050219_1,2576 DOHH2_400M_050219_1,2576,RGILAEMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2577 11.286 513.0 188620.0 25 0 42905.0 + 716 AEPHTSGL 8 111 406.2005145142891 810.3864760953783 2 406.2004577517509 MULTI CID FTMS 0 0 0 2575 98262.5390625 0.6758971421840342 -12 0.10699462890625 2 Unmodified _AEPHTSGL_ REV__ENSG00000198589|ENST00000651943|LRBA;REV__nc|ENSG00000198589|P50851-2|LRBA;REV__nc|ENSG00000198589|P50851|LRBA 13.50788311687929 0.7113601687236069 1 VDAAEK 6 -1 44.72 0.0 0.0 5.5183 0.0 0.0 179.07319592135326 0.0 179.07319592135326 0.0 33.61030901411402 0.0 0.0 0 2.094187677400525 0.0 0.5 0.2614393726401688 VDAAEK 5.5183 - 107 + 1 2.45 80102.7 1.0 172 2403 2575 DOHH2_400M_050219_1,2577 DOHH2_400M_050219_1,2577,AEPHTSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2578 11.299 748.0 168380.0 25 0 21669.0 + 3489 CKFLFDRFI 9 140 396.87916841628754 1187.6156758490629 3 396.8785888552666 MULTI CID FTMS 0 0 0 2575 78272.671875 0.5657619581981455 -2 0.0217809677124023 3 Unmodified _CKFLFDRFI_ REV__ENSG00000176927|ENST00000394835|EFCAB5;REV__nc|ENSG00000176927|A4FU69-3|EFCAB5 14.838274106304384 0.4350285940865338 1 TE[RP]N[HQ]{I|L} 8 -1 23.549 0.0 0.0 1.9829 0.0 0.0 194.12818912371705 0.0 194.12818912371705 0.0 3.883578386120231 0.0 0.0 0 0.3054621874040891 0.0 0.3494850021680094 0.0 TE[RP]N[HQ]{I|L} 1.9829 - 224 + 1 2.45 100453.8 1.0 173 2403 2575 DOHH2_400M_050219_1,2578 DOHH2_400M_050219_1,2578,CKFLFDRFI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2581 11.318 717.0 111660.0 25 0 10179.0 + 32993 SENGNQKNL 9 115 502.244212289144 1002.473871645088 2 502.2446777224541 MULTI CID FTMS 0 0 0 2580 75980.0390625 0.3965412340793431 -22 0.2117366790771484 1 Unmodified _SENGNQKNL_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 37.97399986684836 0.0865783450051559 1 {[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}H]|[RQ]}EKN{I|L} 8 4 + 26.966 0.0 0.0 2.6899 2.6899 79.822 0.0 0.0 0.0 6.380259698573035 9.518440961331295 6.380259698573035 13.069334721591655 0 0.805462187404089 0.0 0.3054621874040891 0.805462187404089 {[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}H]|[RQ]}EKN{I|L};{[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}H]|[RQ]}EKGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QA]NDT{[QV]|[N{I|L}]|[RA]|[KV]};{[DS]|[MA]|[CV]|TT}[QP]NDT{[QV]|[N{I|L}]|[RA]|[KV]};[AG][W{I|L}]ND{I|L}{[QS]|[NT]};{[VA]|[{I|L}G]}C(Carbamidomethyl (C))PNDT{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}[QA]GGDT{[QV]|[N{I|L}]|[RA]|[KV]};[AG][W{I|L}]NDT{[QV]|[N{I|L}]|[RA]|[KV]} 2.6899;1.3862;1.0998;0.4619;0.27484;0.20675;0.18121;0.099181 -;-;-;-;-;-;-;- 165 + 1 2.45 66450.1 1.0 174 2405 2580 DOHH2_400M_050219_1,2581 DOHH2_400M_050219_1,2581,SENGNQKNL True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2583 11.323 136.0 294430.0 25 0 33278.0 + 19200 LEGEESRMSGE 11 56 620.261222960202 1238.5078929872038 2 620.2617675662041 MULTI CID FTMS 0 0 0 2582 421201.6875 0.3930883066263159 7 -0.0997657775878906 1 Oxidation (M) _LEGEESRM(Oxidation (M))SGE_ CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__Q7Z794;ENSG00000167768|ENST00000252244|KRT1;ENSG00000189182|ENST00000341809|KRT77 51.487983226225225 0.1093896055713593 1 {I|L}EGEES 6 5 73.862 0.0 0.0 5.9638 0.0 0.0 0.0 591.2183931940061 591.2183931940061 51.64320017660792 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.7614393726401688 0.0 + {I|L}EGEES 5.9638 + + 112 + 1 2.45 33208.8 1.0 175 2406 2582 DOHH2_400M_050219_1,2583 DOHH2_400M_050219_1,2583,LEGEESRMSGE True False False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 2584 11.333 586.0 263280.0 25 0 19651.0 7687 EKQLQVISVL 10 123 386.2352268746061 1155.6838512240183 3 386.2352783083916 MULTI CID FTMS 0 0 0 2582 129695.7109375 0.6741944373870593 -3 0.049224853515625 2 Unmodified _EKQLQVISVL_ ENSG00000062282|ENST00000228027|DGAT2 13.51866281300042 0.6207119795985845 1 {I|L}E 2 9 33.826 0.0 0.0 2.9269 0.0 0.0 0.0 910.5336359718432 910.5336359718432 16.42827102348061 0.0 0.0 0.0 0 0.2059771852360797 0.6989700043360187 0.3807196863200844 0.0 {I|L}E 2.9269 - 102 + 1 2.45 124751.3 1.0 176 2406 2582 DOHH2_400M_050219_1,2584 DOHH2_400M_050219_1,2584,EKQLQVISVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2585 11.347 800.0 59890.0 25 0 4998.9 -1 LSCPWNLSQG 10 87 581.27281875122 1160.53108456924 2 581.2735473513603 MULTI CID FTMS 0 0 0 2582 84667.9453125 0.9806328243662824 -1 0.0149726867675781 3 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 17.11289562659939 0.5604042439455784 1 {[TV]|[{I|L}S]}N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PSQ 8 -1 37.33 0.0 0.0 3.2166 0.0 0.0 0.0 287.102104426915 287.102104426915 5.789387015435004 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 {[TV]|[{I|L}S]}N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PSQ 3.2166 - 309 1 2.45 40597.4 0.3899999856948852 177 2406 2582 DOHH2_400M_050219_1,2585 DOHH2_400M_050219_1,2585,LSCPWNLSQG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2587 11.356 247.0 310770.0 25 0 37577.0 + 35983 SVQHVDAAEK 10 97 361.852698729159 1082.536266787677 3 361.8523132205009 MULTI CID FTMS 0 0 0 2586 205633.625 0.1981142720954685 -13 0.1671075820922851 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 24.881564428377168 0.4096545554397951 1 HVDAAEK 7 3 31.112 0.0 0.0 2.874 0.0 0.0 314.1618139113571 0.0 314.1618139113571 0.0 5.917600346881507 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3494850021680094 + HVDAAEK 2.874 + + 504 + 1 2.45 66234.1 1.0 178 2407 2586 DOHH2_400M_050219_1,2587 DOHH2_400M_050219_1,2587,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2588 11.369 800.0 109760.0 25 0 18523.0 + 5260 DKLKNEIH 8 107 498.7771985328706 995.5398441325414 2 498.7771789431572 MULTI CID FTMS 0 0 0 2586 134859.609375 0.603640003743107 -5 0.0963315963745117 2 Unmodified _DKLKNEIH_ REV__ENSG00000089177|ENST00000354981|KIF16B;REV__nc|ENSG00000089177|Q96L93-2|KIF16B;REV__nc|ENSG00000089177|Q96L93-4|KIF16B;REV__nc|ENSG00000089177|Q96L93-5|KIF16B;REV__nc|ENSG00000089177|Q96L93-6|KIF16B 24.020572477871973 0.5389365498350341 1 [EP]{I|L}[{I|L}P]WKN 8 -1 + 48.175 0.0 0.0 4.8391 4.8391 80.806 0.0 0.0 0.0 10.255806709656916 3.472462915047778 3.472462915047778 6.817496819840656 0 0.6694451763165201 1.3979400086720375 0.2887254899964357 0.0 [EP]{I|L}[{I|L}P]WKN;[EP]{I|L}[{I|L}P]WNK;[EP]{I|L}AS[HK]SK;[EP]{I|L}[{I|L}P]WGGK;[EP]{I|L}AS[RV]PQ;[EP]{I|L}AAD[RP]K;DK{I|L}{[QN]|[E{I|L}]|[KN]}[PG]PQ;[EP]VVGD[RP]K;[{I|L}A][EP]S[HK]SK;[QP][KA][VP]DKN 4.8391;4.1543;3.431;3.224;2.7811;2.3751;2.2281;1.0505;0.71101;0.49559 -;-;-;-;-;-;-;-;-;- 547 1 2.45 70080.5 0.5299999713897705 179 2407 2586 DOHH2_400M_050219_1,2588 DOHH2_400M_050219_1,2588,DKLKNEIH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2589 11.383 800.0 110180.0 25 0 9721.3 + + 2798 ATDPKAIGH 9 110 455.7411706866584 909.4677884401168 2 455.7413207888603 MULTI CID FTMS 0 0 0 2586 106586.2421875 0.939808415473626 -2 0.0443620681762695 3 Unmodified _ATVGAGGIAGH_ ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44442124-44442513:+|nuORF;nc|ENSG00000117410|Q99437-2|ATP6V0B 13.90604991867851 0.7458848613461305 1 [VS]K{[NV]|[RG]}AEP 8 -1 32.396 0.0 0.0 3.5621 0.0 0.0 0.0 81.99540342584422 81.99540342584422 3.802112417116064 0.0 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 [VS]K{[NV]|[RG]}AEP 3.5621 - 275 1 2.45 73135.9 0.4399999976158142 180 2407 2586 DOHH2_400M_050219_1,2589 DOHH2_400M_050219_1,2589,ATVGAGGIAGH False False ATDPKAIGH 11.383237 455.74132078886 223962.953125 2586.0 ENSG00000117410|ENST00000472174|ATP6V0B;;ENST00000496131.1_1_1:44442124-44442513:+|nuORF;;nc|ENSG00000117410|Q99437-2|ATP6V0B 1.547654281059901 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 2591 11.392 346.0 145070.0 25 0 7967.9 + 7188 EEQENGKAY 9 83 534.2356439954294 1066.4567350576588 2 534.2357665896416 MULTI CID FTMS 0 0 0 2590 178944.1875 0.9147433107502204 4 -0.0301847457885742 1 Unmodified _EEQENGKAY_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 56.17704186161178 0.0281986971544335 1 EEQENGKAY 9 0 + 59.28 0.0 0.0 5.5586 5.5586 82.754 0.0 0.0 0.0 38.08976768583953 15.949755132308567 15.949755132308567 6.197887582883936 0 0.5228787452803376 1.5228787452803376 0.0 0.5 + + EEQENGKAY;EEQEN[KQ]Y;EEQEGGGKAY;EE[AG]ENGKAY;EEQE[W{I|L}]AY;EE[AG]EN[KQ]Y;EEQEGG[KQ]Y;EE[AG]EGGGKAY;EE[AG]E[W{I|L}]AY;[DP][KP]NEQ[HC] 5.5586;4.9774;4.6952;4.6952;4.322;4.1089;4.1089;3.8358;2.9847;2.636 +;-;-;-;-;-;-;-;-;- + 266 + 1 2.45 42816.4 1.0 181 2408 2590 DOHH2_400M_050219_1,2591 DOHH2_400M_050219_1,2591,EEQENGKAY True True EEQENGKAY 11.392047 534.235766589642 4006100.5 2590.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 7.186643759409587 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2592 11.399 372.0 197960.0 25 0 14516.0 + 35985 SVQHVDAAEK 10 93 542.2749924523658 1082.5354319715316 2 542.2752563357353 MULTI CID FTMS 0 0 0 2590 185294.703125 0.4302515871132715 -13 0.1868391036987304 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 1 [VS]QHVDAAEK 10 0 + 110.63 0.0 0.0 10.22 10.22 93.605 0.0 0.0 0.0 83.03248296405036 17.033773764119488 17.033773764119488 9.164539485499262 0 2.9604093769761874 2.0 0.8807196863200843 0.7887254899964358 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAEK;[VS]AGHVD[DV]GK;[VS]AGHVDAAA[VS];[VS]AGHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EK;[VS]QHVD[DV]GK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]QHVDAAA[VS];[VS]QHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EK 10.22;9.3732;8.0437;7.7049;7.0378;7.028;6.7746;6.3119;6.1041;6.1017 +;-;-;-;-;-;-;-;-;- + 1231 + 1 2.45 60968.2 1.0 182 2408 2590 DOHH2_400M_050219_1,2592 DOHH2_400M_050219_1,2592,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2596 11.413 223.0 362980.0 25 0 66432.0 36094 SVRSPTPYKK 10 99 388.22557565764447 1161.6548975731334 3 388.2260314822197 MULTI CID FTMS 0 0 0 2595 114274.4296875 0.2336129306756812 -17 0.2266883850097656 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 10.799506525563784 0.666336781075408 1 P{I|L} 2 9 18.469 0.0 0.0 1.5899 0.0 0.0 429.2369941719256 519.2598749749636 948.4968691468893 0.0 0.0 0.0 0.0 0 0.75 0.0 0.0 0.0 P{I|L} 1.5899 - 108 + 1 2.45 74139.2 1.0 183 2411 2595 DOHH2_400M_050219_1,2596 DOHH2_400M_050219_1,2596,SVRSPTPYKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2599 11.429 449.0 179090.0 25 0 20825.0 42820 VVLDNSGK 8 102 416.2321569795952 830.4497610259904 2 416.2320434451103 MULTI CID FTMS 0 0 0 2598 150041.90625 0.8551594413556974 -2 0.0107955932617187 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 21.74664581756881 0.5868176546531598 1 VVSPASSGK 9 4 + 59.711 0.0 0.0 7.1902 7.1902 88.404 0.0 0.0 0.0 22.09841467886009 6.96380780280721 6.96380780280721 6.96380780280721 0 0.7742275032520141 2.0 0.7302046884880937 0.3707010255125064 VVSPASSGK;VVSE{I|L}WV;VVSE{[NV]|[RG]}GK;VVSPYV[PA];VVSPY[PA]V;[PS]ASG[KS]VV 7.1902;6.3516;5.2343;5.2271;4.5614;0.88638 -;-;-;-;-;- 183 + 1 2.45 69561.1 1.0 184 2413 2598 DOHH2_400M_050219_1,2599 DOHH2_400M_050219_1,2599,VVLDNSGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2600 11.443 800.0 114200.0 25 0 7262.0 + 5857 DPWAPPEK 8 117 470.2302719723895 938.445991011579 2 470.2303039431572 MULTI CID FTMS 0 0 0 2598 99757.3046875 0.2445450791051531 28 -0.2566671371459961 2 Unmodified _DPWAPPEK_ REV__ENSG00000108375|ENST00000407977|RNF43;REV__nc|ENSG00000108375|Q68DV7-2|RNF43;REV__nc|ENSG00000108375|Q68DV7-3|RNF43;REV__nc|ENSG00000108375|Q68DV7-4|RNF43 21.74664581756881 0.5868176546531598 1 {I|L}HVDAAEK 8 -1 75.189 0.0 0.0 8.012 0.0 0.0 56.975733104020215 0.0 56.975733104020215 0.0 47.04033167468005 0.0 0.0 0 2.4604093769761874 0.0 0.4247425010840047 0.3252574989159953 {I|L}HVDAAEK 8.012 - 332 + 1 2.45 74011.2 0.4300000071525574 185 2413 2598 DOHH2_400M_050219_1,2600 DOHH2_400M_050219_1,2600,DPWAPPEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2606 11.476 800.0 95882.0 25 0 17773.0 -1 AASWMKCPLDR 11 70 667.8217037202274 1333.6288545072548 2 667.8235351443291 MULTI CID FTMS 0 0 0 2605 67676.625 0.7966879531063131 1 -0.0163774490356445 1 Carbamidomethyl (C) _AASWMKC(Carbamidomethyl (C))PLDR_ ENSG00000091651|ENST00000219097|ORC6;ENST00000563306.5_1_16:46723682-46729618:+|nuORF;ENST00000569239.5_1_16:46723617-46727095:+|nuORF 5.296884461304476 0.8501568894076437 1 R 1 -1 17.104 0.0 0.0 1.2825 0.0 0.0 1159.517280265847 0.0 1159.517280265847 0.0 6.725490200071285 0.0 0.0 0 0.0 0.0 0.0 0.25 R 1.2825 + + 5 + 1 2.45 59461.6 0.3899999856948852 186 2418 2605 DOHH2_400M_050219_1,2606 DOHH2_400M_050219_1,2606,AASWMKCPLDR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2609 11.484 91.0 597080.0 25 0 70876.0 + 1244 AIKKKDEL 8 70 472.79247106485127 943.5703891965026 2 472.7923461794853 MULTI CID FTMS 0 0 0 2608 557599.125 0.5487261544911094 10 -0.1127614974975586 1 Unmodified _AIKKKDEL_ ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF 27.628801355627647 0.4629596117395134 1 {I|L}AKK[C(Carbamidomethyl (C))S]K 7 5 56.955 0.0 0.0 6.0361 0.0 0.0 0.0 125.07224451236564 125.07224451236564 39.48084461386465 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {I|L}AKK[C(Carbamidomethyl (C))S]K 6.0361 - 97 + 1 2.45 49278.4 1.0 187 2420 2608 DOHH2_400M_050219_1,2609 DOHH2_400M_050219_1,2609,AIKKKDEL False True AIKKKDEL 11.484442 472.792346179485 5188952.0 2608.0 ENST00000599232.1_1_19:58906030-58906114:+|nuORF;;ENSG00000083845|ENST00000196551|RPS5 0.2179830869038899 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2610 11.498 800.0 89942.0 25 0 13248.0 + -1 FYLTFTNLM 9 80 583.2855974754488 1164.5566420176974 2 583.2862426638603 MULTI CID FTMS 0 0 0 2608 93351.046875 0.9337231825625276 1 -0.0324821472167968 2 Oxidation (M) _FYLTFTNLM(Oxidation (M))_ REV__ENST00000492219.1_1_X:40573912-40573993:-|nuORF 6.723162845929126 0.6799819581413107 1 H 1 -1 13.979 0.0 0.0 1.2004 0.0 0.0 1009.4873346219928 0.0 1009.4873346219928 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.2004 - 18 + 1 2.45 59253.7 0.4199999868869781 188 2420 2608 DOHH2_400M_050219_1,2610 DOHH2_400M_050219_1,2610,FYLTFTNLM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2611 11.512 800.0 121380.0 25 0 10656.0 -1 0 70 990.4256951412436 1978.8368373492872 2 990.4258911013604 MULTI CID FTMS 0 0 0 2608 115819.015625 0.5664606599078843 -8 0.0662221908569336 3 1 SA{[RE]|[WV]}G[DV]QGSH 11 -1 63.881 0.0 0.0 3.2282 0.0 0.0 837.3305308108387 0.0 837.3305308108387 0.0 46.1777735418266 0.0 0.0 0 1.424742501084005 0.0 0.6549471895720985 1.916386562212267 SA{[RE]|[WV]}G[DV]QGSH 3.2282 - 593 + 1 2.45 72009.8 0.4099999964237213 189 2420 2608 DOHH2_400M_050219_1,2611 DOHH2_400M_050219_1,2611, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2614 11.533 800.0 120420.0 25 0 5799.5 -1 0 91 660.6192776164157 1978.8360034494472 3 660.6190063357353 MULTI CID FTMS 0 0 0 2613 135875.0 0.7412075153464306 -5 0.061044692993164 1 1 [PS]{[HG]|PP}[C(Carbamidomethyl (C))N]GQSAPSTG[DV]QGSH 20 -1 [PS]{[HG]|PP}[C(Carbamidomethyl (C))N]GQSA + + 64.651 34.645 3.4805 3.2671 3.2671 51.05 0.0 0.0 0.0 0.0 30.00630971391878 0.0 0.0 0 0.3807196863200844 0.0 1.0669015600442575 2.0356668758921828 [PS]{[HG]|PP}[C(Carbamidomethyl (C))N]GQSAPSTG[DV]QGSH 3.2671 - 2209 + 1 2.45 75359.1 0.5 190 2422 2613 DOHH2_400M_050219_1,2614 DOHH2_400M_050219_1,2614, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2621 11.569 800.0 104640.0 25 0 11940.0 + 34844 SQGFSHSQM 9 113 512.7110658750863 1023.4075788169728 2 512.7117187380791 MULTI CID FTMS 0 0 0 2620 101069.3359375 0.0162185583340781 -26 0.3019342422485351 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 83.42873516780209 0.0166860047644719 1 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 67.654 0.0 0.0 6.6107 6.6107 78.9 0.0 0.0 0.0 0.089964282544912 0.089964282544912 0.089964282544912 0.089964282544912 0 1.6237125054200234 1.2218487496163564 0.6307196863200843 0.6747425010840047 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}SQ;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHS{M(Oxidation (M))|F}Q;{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHS[AG]{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}SQ;[AG]SG{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HSQ{M(Oxidation (M))|F} 6.6107;6.6019;5.7351;5.7109;5.4527;5.2448;4.9693;4.8353;4.7179;4.5306 -;+;-;-;-;-;-;-;-;- + 1034 1 2.45 71024.4 0.4300000071525574 191 2428 2620 DOHH2_400M_050219_1,2621 DOHH2_400M_050219_1,2621,SQGFSHSQM True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2623 11.579 387.0 150210.0 25 0 13563.0 + 32994 SENGNQKNL 9 90 502.244212289144 1002.473871645088 2 502.2446166872978 MULTI CID FTMS 0 0 0 2622 180741.484375 0.9432931615689087 2 -0.0273637771606445 1 Unmodified _SENGNQKNL_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 34.10243960390752 0.1078313939113124 1 {[ES]|[DT]|[{I|L}C]}N 3 6 18.952 0.0 0.0 1.8906 0.0 0.0 0.0 669.3309420221311 669.3309420221311 6.478174818886377 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 + {[ES]|[DT]|[{I|L}C]}N 1.8906 + + 84 + 1 2.45 48193.3 1.0 192 2429 2622 DOHH2_400M_050219_1,2623 DOHH2_400M_050219_1,2623,SENGNQKNL True True SENGNQKNL 11.578587 502.244616687298 3537824.75 2622.0 nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;nc|ENSG00000072571|O75330-4|HMMR;;ENSG00000072571|ENST00000393915|HMMR 4.417020877202352 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2624 11.592 800.0 124860.0 25 0 6852.0 + 6311 DVHLWIDEK 9 109 577.7934997493921 1153.5724465655842 2 577.7932617068291 MULTI CID FTMS 0 0 0 2622 119428.8828125 0.3842551648444901 -9 0.0894670486450195 2 Unmodified _DVHLWIDEK_ REV__ENSG00000132437|ENST00000444124|DDC;REV__nc|ENSG00000132437|P20711-2|DDC;REV__nc|ENSG00000132437|P20711-3|DDC;REV__nc|ENSG00000132437|P20711-4|DDC 25.399314129420983 0.2080152500878129 1 [VS]QHVDAAAEK 11 -1 + 117.79 0.0 0.0 10.211 10.211 89.936 0.0 0.0 0.0 5.345826003375692 5.345826003375692 5.345826003375692 5.345826003375692 0 3.7346368802282015 2.0 0.5 0.805462187404089 [VS]QHVDAAAEK;[VS]AGHVDAAAEK;[VS][AG]HVDAAAEK;[VS]QHVD{[NV]|[RG]}EK;[VS]AGHVDA[DV]GK;[VS]QHVAADAEK;[VS]Q{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}AAEK;[VS]AGHVD{[NV]|[RG]}EK;[VS]QHVDA[DV]GK;[VS][AG]HVD{[NV]|[RG]}EK 10.211;9.7474;9.4195;8.2144;8.2066;7.9176;7.6422;7.6334;7.5382;7.42 -;-;-;-;-;-;-;-;-;- 3468 + 1 2.45 78180.5 0.4799999892711639 193 2429 2622 DOHH2_400M_050219_1,2624 DOHH2_400M_050219_1,2624,DVHLWIDEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2627 11.604 298.0 238820.0 25 0 21817.0 + -1 APRQGPTEEK 10 108 385.532538344454 1153.575785633562 3 385.5316650271416 MULTI CID FTMS 0 0 0 2626 98131.125 0.4813384912022487 -4 0.0478267669677734 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))APRQGPTEEK_ REV__ENSG00000167978|ENST00000301740|SRRM2;REV__ENST00000575701.4_1_16:2806365-2807581:+|nuORF;REV__nc|ENSG00000167978|Q9UQ35-2|SRRM2;REV__nc|ENSG00000167978|Q9UQ35-3|SRRM2 14.838274106304384 0.5985701837916485 1 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 8 -1 37.101 0.0 0.0 3.2162 0.0 0.0 0.0 311.1417322957323 311.1417322957323 21.20940677343014 0.0 0.0 0.0 0 0.0 2.0 0.0 0.4247425010840047 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 3.2162 - 360 1 2.45 60714.2 1.0 194 2431 2626 DOHH2_400M_050219_1,2627 DOHH2_400M_050219_1,2627,APRQGPTEEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2629 11.61 151.0 407870.0 25 0 61176.0 + 35984 SVQHVDAAEK 10 96 361.852698729159 1082.536266787677 3 361.8524352908134 MULTI CID FTMS 0 0 0 2628 334979.65625 0.3227305396418461 12 -0.1007423400878906 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 34.221707139014875 0.2185845369562963 1 HVDAAEK 7 3 38.632 0.0 0.0 3.5687 0.0 0.0 314.1625145439596 0.0 314.1625145439596 0.0 11.520111022512456 0.0 0.0 0 0.3054621874040891 0.0 0.3807196863200844 0.3054621874040891 + HVDAAEK 3.5687 + + 324 + 1 2.45 56738.5 1.0 195 2432 2628 DOHH2_400M_050219_1,2629 DOHH2_400M_050219_1,2629,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2632 11.622 310.0 236240.0 25 0 59125.0 + 40326 VHEDYLELRE 10 62 434.8820771055993 0 434.8822204470634 PEAK CID FTMS 0 0 0 2631 80027.2109375 0.5923755841503197 -10 0.0774679183959961 1 Unmodified _VHEDYLELRE_ REV__ENSG00000233954|ENST00000696689|UQCRHL 1.4819007175156935 0.3961065659209837 1 AY 2 -1 10.969 0.0 0.0 1.2641 0.0 0.0 199.388835752411 431.2268160455688 630.6156517979798 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 1.2641 - 10 + 1 2.45 62897.9 1.0 196 2434 2631 DOHH2_400M_050219_1,2632 DOHH2_400M_050219_1,2632,VHEDYLELRE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2633 11.635 736.0 212610.0 25 0 40178.0 + 37319 TITLWVASEQH 11 74 428.8913080909882 0 428.8913757205009 PEAK CID FTMS 0 0 0 2631 132578.3125 0.6217498411920521 -138 1.2601051330566406 2 Unmodified _TITLWVASEQH_ REV__ENST00000314423.11_1_16:69166475-69170710:+|nuORF 1.3296431237094175 0.4761840153648598 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.45 125883.5 1.0 197 2434 2631 DOHH2_400M_050219_1,2633 DOHH2_400M_050219_1,2633,TITLWVASEQH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2636 11.653 677.0 99657.0 25 0 6552.1 + 35986 SVQHVDAAEK 10 95 542.2749924523658 1082.5354319715316 2 542.2755004763603 MULTI CID FTMS 0 0 0 2635 108966.84375 0.2530194154256743 15 -0.1066789627075195 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 81.92315094803507 0.0154917182261583 1 [VS]QHVDAAEK 10 0 + 109.15 0.0 0.0 10.083 10.083 93.547 0.0 0.0 0.0 11.741789160297856 11.741789160297856 11.741789160297856 9.164539485499262 0 3.2034021960761265 2.0 0.4247425010840047 0.7742275032520141 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAEK;[VS]QHVD[DV]GK;[VS]QHVDAA{[SA]|[TG]}V;[VS]AGHVD[DV]GK;[VS][AG]HVD[DV]GK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS][AG]HVDAA{[SA]|[TG]}V 10.083;9.2362;8.9981;8.0294;7.709;7.5794;7.1828;6.9873;6.9144;6.4039 +;-;-;-;-;-;-;-;-;- + 1796 + 1 2.45 59433.5 1.0 198 2436 2635 DOHH2_400M_050219_1,2636 DOHH2_400M_050219_1,2636,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2640 11.67 325.0 255860.0 25 0 64336.0 36095 SVRSPTPYKK 10 100 388.22557565764447 1161.6548975731334 3 388.2261230349541 MULTI CID FTMS 0 0 0 2639 145155.46875 0.2967435020329754 11 -0.0801725387573242 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 10.799506525563784 0.666336781075408 1 P{I|L}T{M(Oxidation (M))|F}KK 6 7 36.151 0.0 0.0 3.112 0.0 0.0 429.236200358578 0.0 429.236200358578 0.0 24.89149032078229 0.0 0.0 0 0.805462187404089 0.0 0.0 0.2134679910804404 P{I|L}T{M(Oxidation (M))|F}KK 3.112 - 100 + 1 2.45 73705.9 1.0 199 2439 2639 DOHH2_400M_050219_1,2640 DOHH2_400M_050219_1,2640,SVRSPTPYKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2643 11.685 455.0 124680.0 25 0 18045.0 + 42944 VVSPKSQS 8 83 416.2321569795952 830.4497610259904 2 416.2315856814384 MULTI CID FTMS 0 0 0 2642 68559.5859375 0.3907533480160009 26 -0.3143749237060547 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 14.838274106304384 0.6917062315640577 1 VVSE 4 5 42.307 0.0 0.0 5.0945 0.0 0.0 0.0 413.2147310846313 413.2147310846313 31.338031200885155 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 VVSE 5.0945 - 96 + 1 2.45 48555.3 1.0 200 2441 2642 DOHH2_400M_050219_1,2643 DOHH2_400M_050219_1,2643,VVSPKSQS False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2646 11.705 800.0 97657.0 25 0 10824.0 8772 EVTEAMLYEK 10 115 404.8666179999269 1211.5780245999808 3 404.8667785525322 MULTI CID FTMS 0 0 0 2645 63728.8046875 0.6610674701091642 1 -0.0163688659667968 1 Unmodified _EVTEAMLYEK_ ENSG00000184388|ENST00000373521|PABPC1L2B;ENSG00000186288|ENST00000373519|PABPC1L2A 10.073929032068715 0.6785112666868882 1 [VS]AE{M(Oxidation (M))|F}AGV[{M(Oxidation (M))|F}T]GK 12 8 + 52.434 0.0 0.0 4.3277 4.3277 72.591 0.0 0.0 0.0 8.894038103762803 0.9813624419633272 0.9813624419633272 1.268732363854994 0 0.5044321917401079 2.0 0.3778623208748889 0.0 [VS]AE{M(Oxidation (M))|F}AGV[{M(Oxidation (M))|F}T]GK;[VS]A{M(Oxidation (M))|F}{[CP]|[EA]}GV[{M(Oxidation (M))|F}T]GK;[VS]A{M(Oxidation (M))|F}AADV[{M(Oxidation (M))|F}T]GK;[VS]AE{M(Oxidation (M))|F}QV[{M(Oxidation (M))|F}T]GK;[VS]AE{M(Oxidation (M))|F}AGA[Y{I|L}]GK;[VS]A{M(Oxidation (M))|F}{[CP]|[EA]}R[{M(Oxidation (M))|F}T]GK;[VS]A{M(Oxidation (M))|F}{[CP]|[EA]}GA[Y{I|L}]GK;[WK]HVGE{[CP]|[EA]}EK;[VS][{M(Oxidation (M))|F}E]AAGV[{M(Oxidation (M))|F}T]GK;[VS]AE{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GK 4.3277;4.223;3.9745;3.782;3.7439;3.6773;3.6392;3.5936;3.5499;3.4456 -;-;-;-;-;-;-;-;-;- 2452 1 2.45 64358.6 0.4099999964237213 201 2443 2645 DOHH2_400M_050219_1,2646 DOHH2_400M_050219_1,2646,EVTEAMLYEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2652 11.738 800.0 116180.0 25 0 11306.0 + -1 MHSCYEGY 8 94 531.6850159453318 1061.3554789574634 2 531.6843749880791 MULTI CID FTMS 0 0 0 2651 92492.1640625 0.752714787145823 -5 0.0324287414550781 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))HSC(Carbamidomethyl (C))YEGY_ REV__ENSG00000160293|ENST00000371850|VAV2;REV__nc|ENSG00000160293|P52735-2|VAV2;REV__nc|ENSG00000160293|P52735-3|VAV2 5.760428011301431 0.7893668129297577 1 Y 1 -1 16.99 0.0 0.0 1.6008 0.0 0.0 880.2811971965244 0.0 880.2811971965244 0.0 5.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.6008 + + 25 + 1 2.45 74061.2 0.4199999868869781 202 2448 2651 DOHH2_400M_050219_1,2652 DOHH2_400M_050219_1,2652,MHSCYEGY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2656 11.762 800.0 57833.0 25 0 2526.2 + -1 QSVMSCCCC 9 81 539.1669815549161 1076.319410176632 2 539.1671630740166 MULTI CID FTMS 0 0 0 2655 106326.765625 1.0 0 0.0 1 2 Carbamidomethyl (C) _QSVMSC(Carbamidomethyl (C))C(Carbamidomethyl (C))CC_ REV__ENSG00000128250|ENST00000354373|RFPL1;REV__ENSG00000128276|ENST00000249007|RFPL3;REV__nc|ENSG00000128276|O75679-2|RFPL3 1.844237919475145 0.850302753031785 1 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 1.2538 0.0 0.0 911.2735250221384 0.0 911.2735250221384 0.0 -2.95880017344075 -2.95880017344075 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2538 + + 34 + 1 2.45 42181.6 0.4099999964237213 203 2451 2655 DOHH2_400M_050219_1,2656 DOHH2_400M_050219_1,2656,QSVMSCCCC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2657 11.776 800.0 85171.0 25 0 2837.0 -1 0 72 927.1609953760808 3704.614875637923 4 927.4132568240166 MULTI CID FTMS 0 0 0 2655 100205.0234375 0.4078980944466232 -8 0.056924819946289 2 1 AT 2 -1 10.745 0.0 0.0 0.29005 0.0 0.0 2695.2061491857744 834.2992647760374 3529.505413961812 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 AT 0.29005 - 34 + 1 2.45 55676.7 0.4099999964237213 204 2451 2655 DOHH2_400M_050219_1,2657 DOHH2_400M_050219_1,2657, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2660 11.786 166.0 441990.0 25 0 31761.0 + + 641 AEADKPRRL 9 92 352.536721799716 1054.588335999348 3 352.5367614626884 MULTI CID FTMS 0 0 0 2659 231739.953125 0.8320932743392224 -9 0.0748348236083984 1 Unmodified _AELHTKLML_ ENSG00000105373|ENST00000246802|NOP53;ENST00000600410.5_1_19:48257983-48259211:+|nuORF;ENST00000598681.5_1_19:48248882-48259836:+|nuORF 18.1463463914782 0.3454829746528889 1 AEAD{I|L} 5 -1 63.443 0.0 0.0 6.0159 0.0 0.0 0.0 552.3370109640802 552.3370109640802 50.96910013008056 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 AEAD{I|L} 6.0159 - 57 + 1 2.45 60730.4 1.0 205 2453 2659 DOHH2_400M_050219_1,2660 DOHH2_400M_050219_1,2660,AELHTKLML False False AEADKPRRL 11.785859 352.536761462688 1187025.25 2659.0 ENSG00000105373|ENST00000246802|NOP53;;ENST00000600410.5_1_19:48257983-48259211:+|nuORF;;ENST00000598681.5_1_19:48248882-48259836:+|nuORF 4.058913071950276 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 2661 11.797 628.0 107210.0 25 0 21685.0 + 31376 RNVSTGDVN 9 88 481.2386172546584 960.4626815761168 2 481.2390319705009 MULTI CID FTMS 0 0 0 2659 110770.859375 0.4941402985444983 -10 0.0912036895751953 2 Unmodified _RNVSTGDVN_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 27.22323531849824 0.1848086127304535 1 [RN]VSTGDVN 9 0 + 59.09 0.0 0.0 6.1523 6.1523 91.731 0.0 0.0 0.0 5.642492736872597 45.59562510389476 5.642492736872597 17.447274948966935 0 0.9247425010840048 0.0 0.0 0.0 + + [RN]VSTGDVN;[RN]{[WT]|[RM]}GDVN;[VS][RN]TGDVN;[DG]T[RK]GDVN;[DG][RK]TGDVN;{[SA]|[TG]}D[RK]GDVN;[RN]VSWWN;[RN]{[WT]|[RM]}[RD]N;[VS][RN]WWN;[DG][RK]WWN 6.1523;4.3357;3.6671;3.6024;3.6024;3.3714;2.7294;1.5873;0.24419;0.17948 +;-;-;-;-;-;-;-;-;- + 181 1 2.45 58508.0 1.0 206 2453 2659 DOHH2_400M_050219_1,2661 DOHH2_400M_050219_1,2661,RNVSTGDVN False True RNVSTGDVN 11.796799 481.239031970501 927813.875 2659.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 7.009769598642985 2.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 2664 11.817 800.0 118120.0 25 0 13544.0 + 34578 SPHDPAEK 8 115 440.7115763037348 879.4085996742696 2 440.7121154665947 MULTI CID FTMS 0 0 0 2663 88852.375 0.5154874155683481 -8 0.0836219787597656 1 Unmodified _SPHDPAEK_ REV__ENSG00000115221|ENST00000283249|ITGB6;REV__nc|ENSG00000115221|P18564-2|ITGB6 20.453626601364224 0.6087503291685402 1 HVDAAEK 7 -1 68.581 0.0 0.0 7.7985 0.0 0.0 111.034066724864 0.0 111.034066724864 0.0 55.48200434946352 0.0 0.0 0 2.4247425010840047 0.0 0.6861818737241735 0.3807196863200844 HVDAAEK 7.7985 - 225 + 1 2.45 76405.3 0.4099999964237213 207 2455 2663 DOHH2_400M_050219_1,2664 DOHH2_400M_050219_1,2664,SPHDPAEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2666 11.822 9.7 3572600.0 25 0 494100.0 + 34845 SQGFSHSQM 9 58 512.7110658750863 1023.4075788169728 2 512.7115356326103 MULTI CID FTMS 0 0 0 2665 5552389.0 0.8909897750360295 2 -0.023050308227539 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 40.23920728925047 0.0741434193262949 1 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 57.469 0.0 0.0 5.6155 5.6155 83.125 0.0 0.0 0.0 22.84295961169203 42.8649385198808 22.84295961169203 6.478174818886373 0 1.1549471895720984 0.958607314841775 1.066901560044258 0.7302046884880937 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F};[HS][YQ]QTN{M(Oxidation (M))|F};{[QS]|[NT]}G[CS][HK]{[YD]|[{M(Oxidation (M))|F}M]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[DP]{[YD]|[{M(Oxidation (M))|F}M]};{[QS]|[NT]}[C(Carbamidomethyl (C))S][HK]{[YD]|[{M(Oxidation (M))|F}M]} 5.6155;4.9825;4.7157;4.0938;4.0774;3.214;2.1999;2.1063;2.1063;1.4733 -;-;-;-;-;-;-;-;-;- 114 1 2.45 33421.8 1.0 208 2456 2665 DOHH2_400M_050219_1,2666 DOHH2_400M_050219_1,2666,SQGFSHSQM True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2667 11.836 800.0 157470.0 25 0 12376.0 + + 5371 DIKGKGAV 8 153 394.23697225516673 786.4593915771335 2 394.2363769412041 MULTI CID FTMS 0 0 0 2665 95762.421875 0.7500057515825418 -6 0.0754976272583007 2 Unmodified _DLKGVGAK_ ENSG00000116704|ENST00000235345|SLC35D1 18.13498045792455 0.6430038125133779 1 D{I|L}K 3 -1 54.693 0.0 0.0 6.9543 0.0 0.0 0.0 427.2310077079216 427.2310077079216 31.386124101697 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 D{I|L}K 6.9543 + + 180 + 1 2.45 101545.1 0.3899999856948852 209 2456 2665 DOHH2_400M_050219_1,2667 DOHH2_400M_050219_1,2667,DLKGVGAK False False DIKGKGAV 11.836165 394.236376941204 653969.1875 2665.0 ENSG00000116704|ENST00000235345|SLC35D1 3.076634407043457 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 2673 11.864 492.0 202730.0 25 0 13395.0 + 25725 NIKKKQEAL 9 143 357.8889200927715 1070.6449308785143 3 357.8889648318291 MULTI CID FTMS 0 0 0 2672 67812.8203125 0.5962418804500835 4 -0.0913457870483398 1 Unmodified _NIKKKQEAL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 18.1463463914782 0.3454829746528889 1 N{I|L}K 3 6 45.084 0.0 0.0 4.2109 0.0 0.0 0.0 712.3977755182249 712.3977755182249 29.59932700965966 0.0 0.0 0.0 0 0.1271595765414318 2.0 0.0 0.0 + N{I|L}K 4.2109 + + 113 + 1 2.45 86063.7 1.0 210 2461 2672 DOHH2_400M_050219_1,2673 DOHH2_400M_050219_1,2673,NIKKKQEAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2675 11.868 59.0 917010.0 25 0 124890.0 + 35710 SVHEEVQEK 9 88 362.1805593980059 1083.5198487942178 3 362.1804077029228 MULTI CID FTMS 0 0 0 2674 625650.0625 0.7623171349842791 -2 0.0152750015258789 1 Unmodified _SVHEEVQEK_ REV__ENSG00000141013|ENST00000268699|GAS8;REV__nc|ENSG00000141013|O95995-2|GAS8 19.256988751693697 0.3154191944385105 1 HVDAAEK 7 -1 40.412 0.0 0.0 3.7297 0.0 0.0 315.1446070667883 0.0 315.1446070667883 0.0 14.848615238728248 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3252574989159953 HVDAAEK 3.7297 - 219 + 1 2.45 49672.5 1.0 211 2462 2674 DOHH2_400M_050219_1,2675 DOHH2_400M_050219_1,2675,SVHEEVQEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2677 11.885 800.0 112090.0 25 0 30441.0 + 28717 PVSWVLWEGTE 11 69 434.8820771055993 0 434.8823425173759 PEAK CID FTMS 0 0 0 2676 109193.28125 0.8082680004464438 19 -0.3267822265625 1 Unmodified _PVSWVLWEGTE_ REV__ENST00000532654.5_1_11:78775723-78781043:-|nuORF 2.843284757254958 0.4761840153648598 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.45 78537.4 0.3899999856948852 212 2463 2676 DOHH2_400M_050219_1,2677 DOHH2_400M_050219_1,2677,PVSWVLWEGTE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2678 11.898 800.0 76626.0 25 0 6490.2 + 6229 DTNADKQLS 9 114 496.23811707837984 990.4616812235596 2 496.2384826540947 MULTI CID FTMS 0 0 0 2676 99215.1796875 0.9324741095120848 -13 0.126565933227539 2 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 57.24910588100465 0.0276051374632116 1 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S 9 0 + 40.274 0.0 0.0 4.0662 4.0662 81.103 0.0 0.0 0.0 14.595016772753317 22.175009277281703 14.595016772753317 9.208187539523747 0 1.5317183090963749 0.0 1.2059771852360797 0.0 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S;{[DA]|[EG]}[SG]ADKQ{I|L}S;[QP]C(Carbamidomethyl (C))MKQ{I|L}S;[HV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[YN]{I|L}S;{[DA]|[EG]}{[QS]|[NT]}DKQ{I|L}S;{[QG]|[NA]}{[CP]|[EA]}MKQ{I|L}S;{[YC]|[HE]}{[{M(Oxidation (M))|F}C]|[YS]}KQ{I|L}S 4.0662;3.1365;3.1365;2.2112;1.6453;1.6396;1.5442;1.5324;1.526;1.0195 +;-;-;-;-;-;-;-;-;- + 243 1 2.45 53047.3 0.449999988079071 213 2463 2676 DOHH2_400M_050219_1,2678 DOHH2_400M_050219_1,2678,DTNADKQLS True True DTNADKQLS 11.898475 496.238482654095 1022376.75 2676.0 ENSG00000163220|ENST00000368738|S100A9 1.9236369331677756 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2679 11.912 800.0 96668.0 25 0 5594.4 + 10309 FSDHHENKY 9 123 588.7576159307886 1175.500678928377 2 588.7574340701103 MULTI CID FTMS 0 0 0 2676 93565.1328125 0.753768041839243 -1 0.004791259765625 3 Unmodified _FSDHHENKY_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 70.49555756994154 0.020907391616941 1 {M(Oxidation (M))|F}SDHHENKY 9 0 + 68.709 0.0 0.0 5.8451 5.8451 78.784 0.0 0.0 0.0 1.711314510191798 11.434526764861864 1.711314510191798 1.711314510191798 0 2.3494850021680094 0.0 0.0 0.3054621874040891 + + {M(Oxidation (M))|F}SDHHENKY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DHHENKY;{M(Oxidation (M))|F}SDHHEGGKY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DHHEGGKY;{M(Oxidation (M))|F}SDHHENYK;[QP]C(Carbamidomethyl (C))THENKY;[AG]PC(Carbamidomethyl (C))THENKY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NKY;{M(Oxidation (M))|F}SDHHEGGYK;[QP][CG]THENKY 5.8451;5.6995;5.0617;4.9161;4.8723;4.7912;4.3192;4.2472;4.089;4.0079 +;+;-;-;-;-;-;-;-;- + 1243 + 1 2.45 60264.8 0.4300000071525574 214 2463 2676 DOHH2_400M_050219_1,2679 DOHH2_400M_050219_1,2679,FSDHHENKY True True FSDHHENKY 11.912308 588.75743407011 2557545.875 2676.0 nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;;ENSG00000100991|ENST00000252015|TRPC4AP;;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP 8.756404717763266 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2681 11.917 93.0 733810.0 25 0 72316.0 + + 35711 SVQHVDAAEK 10 77 542.7667867975822 1083.5190206619643 2 542.7669555544853 MULTI CID FTMS 0 0 0 2680 748326.125 1.0 0 0.0 1 Unmodified _SVHEEVQEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 41.95555342248728 0.0647214845423414 1 [VS]EHVDAAEK 10 -1 + 106.99 0.0 0.0 9.874 9.874 98.176 0.0 0.0 0.0 20.152405929883983 20.152405929883983 20.152405929883983 24.25968732272281 0 3.147940008672037 2.0 1.1861818737241734 0.6989700043360187 [VS]EHVDAAEK;WEH{[RE]|[WV]}AEK;[VS]EHVDAAA[VS];{[YC]|[HE]}VSVDAAEK;W{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}]AAEK;{[YC]|[HE]}VSVDAAA[VS];[HV]ESVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}HSVDAAEK;[HV]DTVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}SHVDAAEK 9.874;7.635;7.1683;6.5826;6.5025;5.7368;5.5455;5.2295;5.0828;5.0235 -;-;-;-;-;-;-;-;-;- 1092 + 1 2.45 59504.7 1.0 215 2464 2680 DOHH2_400M_050219_1,2681 DOHH2_400M_050219_1,2681,SVHEEVQEK False False SVQHVDAAEK 11.917112 542.766955554485 0.0 2680.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 2.172012646993001 2.0 False 10.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 2682 11.93 713.0 105740.0 25 0 5637.0 5937 DQENEIVQYGR 11 101 450.88274096108194 1349.6263934834458 3 450.8829528689384 MULTI CID FTMS 0 0 0 2680 90292.65625 0.4752277894024926 -3 0.0600252151489257 2 Unmodified _DQENEIVQYGR_ ENSG00000119326|ENST00000325551|CTNNAL1;nc|ENSG00000119326|Q9UBT7-2|CTNNAL1;nc|ENSG00000119326|Q9UBT7-3|CTNNAL1 11.494710602746466 0.7960433852372589 1 NT{M(Oxidation (M))|F}QR 5 8 35.584 0.0 0.0 2.6366 0.0 0.0 685.2972863964717 0.0 685.2972863964717 0.0 7.75100543147304 0.0 0.0 0 0.5 0.0 0.0 0.8901668265424344 NT{M(Oxidation (M))|F}QR 2.6366 - 286 + 1 2.45 61212.2 1.0 216 2464 2680 DOHH2_400M_050219_1,2682 DOHH2_400M_050219_1,2682,DQENEIVQYGR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2683 11.944 800.0 65630.0 25 0 5356.3 + 33061 SEQPLTSQSQS 11 103 596.2781261424583 1190.5416993517165 2 596.2786743044853 MULTI CID FTMS 0 0 0 2680 86991.8125 0.7151235441457268 -3 0.0600252151489257 3 Unmodified _SEQPLTSQSQS_ REV__ENSG00000153820|ENST00000392056|SPHKAP;REV__nc|ENSG00000153820|Q2M3C7-2|SPHKAP 42.312485326615175 0.1767732348921932 1 SQSPD[{I|L}P]TN 9 -1 71.691 0.0 0.0 6.0217 0.0 0.0 233.10427366987892 0.0 233.10427366987892 0.0 21.418271902055324 0.0 0.0 0 0.6861818737241735 0.0 1.6861818737241734 0.75 SQSPD[{I|L}P]TN 6.0217 - 619 + 1 2.45 45130.8 0.4099999964237213 217 2464 2680 DOHH2_400M_050219_1,2683 DOHH2_400M_050219_1,2683,SEQPLTSQSQS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2685 11.951 167.0 453450.0 25 0 107040.0 + 10310 FSDHHENKY 9 105 392.8407421181213 1175.500396954564 3 392.8403808474541 MULTI CID FTMS 0 0 0 2684 378466.875 0.9536082372758496 1 -0.0408287048339843 1 Unmodified _FSDHHENKY_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 20.580933911654288 0.2795815587326093 1 [HD]SHENK 7 4 26.564 0.0 0.0 2.2598 0.0 0.0 0.0 325.1224851813667 325.1224851813667 6.172910663254854 0.0 0.0 0.0 0 0.0 0.744727494896694 0.3807196863200844 0.5 [HD]SHENK 2.2598 - 203 1 2.45 64735.4 1.0 218 2465 2684 DOHH2_400M_050219_1,2685 DOHH2_400M_050219_1,2685,FSDHHENKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2686 11.965 800.0 43756.0 25 0 9514.9 -1 0 40 1061.3645869589502 2120.714620984701 2 1061.366625964642 MULTI CID FTMS 0 0 0 2684 107084.3125 0.8302605896023896 -3 0.0801324844360351 2 1 P 1 -1 1.5938 0.0 0.0 0.075154 0.0 0.0 1796.6091839522549 224.03542505435783 2020.6446090066129 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.075154 - 9 + 1 2.45 39121.8 0.3700000047683716 219 2465 2684 DOHH2_400M_050219_1,2686 DOHH2_400M_050219_1,2686, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2687 11.971 331.0 307370.0 25 0 14689.0 + 25707 NIHKRIHGV 9 133 358.5491729545243 1072.625689463773 3 358.5486022830009 MULTI CID FTMS 0 0 0 2684 124707.09375 0.4014416027939969 -5 0.095407485961914 3 Unmodified _NIHKRIHGV_ ENSG00000071082|ENST00000264258|RPL31;ENST00000480540.1_1_14:59261390-59261744:+|nuORF;nc|ENSG00000071082|P62899-2|RPL31;nc|ENSG00000071082|P62899-3|RPL31 16.149105407346934 0.3995459350917656 1 {[QV]|[N{I|L}]|[RA]|[KV]}HKT 5 5 42.218 0.0 0.0 3.936 0.0 0.0 0.0 476.2675875299438 476.2675875299438 30.0 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}HKT 3.936 - 98 + 1 2.45 85060.6 1.0 220 2465 2684 DOHH2_400M_050219_1,2687 DOHH2_400M_050219_1,2687,NIHKRIHGV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2688 11.984 800.0 61109.0 25 0 7362.3 -1 ETFRCWEH 8 79 582.7493434351608 1163.4841339371214 2 582.7495605349541 MULTI CID FTMS 0 0 0 2684 89351.28125 1.0 0 0.0 4 Carbamidomethyl (C) _ETFRC(Carbamidomethyl (C))WEH_ ENST00000585421.5_1_17:76849149-76849242:-|nuORF 12.531546534597751 0.7257836412119636 1 EQSEH 5 -1 50.433 0.0 0.0 4.3347 0.0 0.0 535.2399159162125 0.0 535.2399159162125 0.0 33.44335023848103 0.0 0.0 0 0.7742275032520141 0.0 0.9247425010840048 0.0 EQSEH 4.3347 - 78 1 2.45 41707.7 0.4199999868869781 221 2465 2684 DOHH2_400M_050219_1,2688 DOHH2_400M_050219_1,2688,ETFRCWEH False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2692 12.009 800.0 92722.0 25 0 5881.5 + 33478 SIHRHTVV 8 110 474.7724816694235 947.530410405647 2 474.7725707888603 MULTI CID FTMS 0 0 0 2691 69650.34375 0.8165825376107715 3 -0.0479488372802734 1 Unmodified _SIHRHTVV_ ENSG00000100162|ENST00000215980|CENPM 66.45667989310934 0.1167381424463928 1 {[TV]|[{I|L}S]}HHRTVV 8 2 + 78.74 0.0 0.0 8.31 8.31 86.699 0.0 0.0 0.0 20.66946789630613 65.64117228912984 20.66946789630613 3.3103844862777976 0 1.805462187404089 2.0 1.635151878060192 0.0 {[TV]|[{I|L}S]}HHRTVV;{[TV]|[{I|L}S]}HRHTVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}P]R[YG]V 8.31;7.9607;0.1406 -;+;- + 449 1 2.45 61413.3 0.4099999964237213 222 2468 2691 DOHH2_400M_050219_1,2692 DOHH2_400M_050219_1,2692,SIHRHTVV True True SIHRHTVV 12.008962 474.77257078886 409797.15625 2691.0 ENSG00000100162|ENST00000215980|CENPM 4.127255121866862 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2695 12.029 800.0 143640.0 25 0 6348.4 + 25793 NKKQELKTI 9 162 367.8929371709654 1100.6569821130963 3 367.8920165896416 MULTI CID FTMS 0 0 0 2694 79350.6484375 0.9219042693454632 -1 0.0040645599365234 1 Unmodified _NKKQELKTI_ REV__ENSG00000077264|ENST00000372007|PAK3;REV__ENSG00000180370|ENST00000327134|PAK2;REV__ENST00000556425.2_1_15:21937379-21938108:-|nuORF;REV__nc|ENSG00000077264|O75914-3|PAK3;REV__nc|ENSG00000077264|O75914-4|PAK3;REV__nc|ENSG00000077264|O75914|PAK3 8.155526934196011 0.6299788542272896 1 WY 2 -1 19.464 0.0 0.0 1.7684 0.0 0.0 733.4992257185619 0.0 733.4992257185619 0.0 6.365006360318688 0.0 0.0 0 0.0 0.0 0.0 0.0 WY 1.7684 - 92 + 1 2.45 94614.0 0.3499999940395355 223 2470 2694 DOHH2_400M_050219_1,2695 DOHH2_400M_050219_1,2695,NKKQELKTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2696 12.041 642.0 196370.0 25 0 17371.0 43756 YEEEEEEDY 9 131 412.1464867120033 1233.41763073621 3 412.1467162966728 MULTI CID FTMS 0 0 0 2694 119972.3203125 0.2672730977060519 -6 0.1006975173950195 2 Unmodified _YEEEEEEDY_ ENSG00000243156|ENST00000441493|MICAL3 12.531546534597751 0.4974689918368763 1 ETY 3 7 28.162 0.0 0.0 2.2832 0.0 0.0 822.2484859740529 0.0 822.2484859740529 0.0 2.4754753762344706 0.0 0.0 0 0.5 0.0 0.5994850021680094 0.0 ETY 2.2832 - 371 + 1 2.45 101549.2 1.0 224 2470 2694 DOHH2_400M_050219_1,2696 DOHH2_400M_050219_1,2696,YEEEEEEDY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2699 12.057 573.0 104140.0 25 0 11689.0 + 22887 LSCPWNLSQG 10 100 581.2724253802877 1160.5302978273753 2 581.2731201052666 MULTI CID FTMS 0 0 0 2698 142276.046875 0.3626642354343324 -12 0.1963939666748047 1 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 55.50274090549119 0.048383292844968 1 {[DA]|[EG]}[TA]{[TV]|[{I|L}S]}PSQSAN 12 10 + 72.986 0.0 0.0 6.289 6.289 92.118 0.0 0.0 0.0 0.4573533380937107 30.656079425183226 0.4573533380937107 17.16135186242228 0 1.3494850021680094 0.958607314841775 1.579689690656103 0.3807196863200844 {[DA]|[EG]}[TA]{[TV]|[{I|L}S]}PSQSAN;{[SA]|[TG]}G{M(Oxidation (M))|F}[RH]SQSAN;{[DA]|[EG]}[PA][C(Carbamidomethyl (C))R]S{I|L}SAN;{[QS]|[NT]}{M(Oxidation (M))|F}[RH]SQSAN;{[SA]|[TG]}GP{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}QSAN;{[SA]|[TG]}G{M(Oxidation (M))|F}[RH]S[AG]SAN;{[QS]|[NT]}P{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}QSAN;{[QS]|[NT]}{M(Oxidation (M))|F}[RH]S[AG]SAN;[PS]Q{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}QSAN;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}V]{[DS]|[MA]|[CV]|TT}QSAN 6.289;4.8102;4.591;4.4552;4.1758;4.0237;3.8177;3.6655;3.6314;3.465 -;-;-;-;-;-;-;-;-;- 767 1 2.45 50695.6 1.0 225 2472 2698 DOHH2_400M_050219_1,2699 DOHH2_400M_050219_1,2699,LSCPWNLSQG True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2702 12.078 800.0 103490.0 25 0 15713.0 + -1 EMAQDMDTDY 10 100 617.715975025504 1233.417397117808 2 617.7164184451103 MULTI CID FTMS 0 0 0 2701 121108.109375 0.6360713244380894 -3 0.0207481384277343 1 Oxidation (M) _EMAQDM(Oxidation (M))DTDY_ REV__ENSG00000042445|ENST00000295802|RETSAT;REV__nc|ENSG00000042445|Q6NUM9-2|RETSAT 21.53697664764585 0.484802182336468 1 THADY 5 -1 56.23 0.0 0.0 4.5589 0.0 0.0 628.1740589826187 0.0 628.1740589826187 0.0 11.588709367037282 0.0 0.0 0 1.5 0.0 1.8807196863200843 0.0 THADY 4.5589 - 272 1 2.45 66019.1 0.5099999904632568 226 2474 2701 DOHH2_400M_050219_1,2702 DOHH2_400M_050219_1,2702,EMAQDMDTDY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2703 12.091 800.0 186030.0 25 0 16843.0 + -1 SVRYSSSKH 9 175 364.8528019863616 1091.5365765592846 3 364.8523437380791 MULTI CID FTMS 0 0 0 2701 106834.59375 0.4954077030255209 -12 0.1977901458740234 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SVRYSSSKH_ ENSG00000186395|ENST00000269576|KRT10;P13645 28.181266145913348 0.172619120047252 1 EVRYSSSKH 9 -1 + 58.173 0.0 0.0 5.3295 5.3295 86.831 0.0 0.0 0.0 31.630881249598342 10.72559982972642 10.72559982972642 10.472287753157516 0 1.4564608101803795 0.4685210829577448 0.6861818737241735 0.0 EVRYSSSKH;EV[QT]D[HV]KH;{M(Oxidation (M))|F}HR{[HG]|PP}SSKH;[RV]DS{[HG]|PP}GVHE;EV[TA]GD[HV]KH;EV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S[HV]KH;[RV]EYSG[RP]E;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[HG]|PP}GVHE;EV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WH]KH;{M(Oxidation (M))|F}[RP]GD[HV]KH 5.3295;4.3701;4.3365;4.2777;4.2556;3.1781;3.116;2.9289;2.8604;2.5667 -;-;-;-;-;-;-;-;-;- 683 + 1 2.45 121118.4 0.9100000262260436 227 2474 2701 DOHH2_400M_050219_1,2703 DOHH2_400M_050219_1,2703,SVRYSSSKH False False SVRYSSSKH 12.091497 364.852343738079 863956.25 2701.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 5.382706801096599 3.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 2705 12.098 105.0 410790.0 25 0 49636.0 + 34846 SQGFSHSQM 9 84 512.7110658750863 1023.4075788169728 2 512.7114135622978 MULTI CID FTMS 0 0 0 2704 605467.125 0.0971590818826745 21 -0.1817493438720703 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 59.36838082759317 0.0264317782606298 1 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 63.317 0.0 0.0 6.1869 6.1869 78.076 0.0 0.0 0.0 0.3046868292253251 0.3046868292253251 0.3046868292253251 0.3046868292253251 0 1.6677353201839438 1.0 1.0010912013506126 0.3494850021680094 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G[MN]SW{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F} 6.1869;6.1571;5.2871;5.1388;4.9156;4.2338;4.0158;3.9565;3.8676;3.7916 -;-;-;-;-;-;-;-;-;- 315 1 2.45 36647.3 1.0 228 2475 2704 DOHH2_400M_050219_1,2705 DOHH2_400M_050219_1,2705,SQGFSHSQM True False SQGFSHSQM 12.097628 512.711413562298 128904760.0 2704.0 ENSG00000181143|ENST00000397910|MUC16 10.144326527913412 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2706 12.109 682.0 129690.0 25 0 12442.0 42821 VVLDNSGK 8 110 416.2320609286177 830.4495689240355 2 416.2319213747978 MULTI CID FTMS 0 0 0 2704 98935.578125 1.0 0 0.0 2 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 28.486842064014134 0.4448922141344407 1 VVSPASSGK 9 4 + 52.687 0.0 0.0 6.3443 6.3443 84.92 0.0 0.0 0.0 18.596048462426825 5.362950090795522 5.362950090795522 5.362950090795522 0 0.7302046884880937 2.0 0.7134679910804405 0.3054621874040891 VVSPASSGK;VVSEE[R{I|L}];VVSPYVAP;VVSE{[NV]|[RG]}GK;VVSE[W{I|L}]V;VVSP[RH]H;VVSPA[YV]P;VVSPY[PA]V;{[TV]|[{I|L}S]}{[QS]|[NT]}QAVV;[VS][QT]QAVV 6.3443;5.6985;5.1771;4.8327;4.8139;4.6301;4.2155;4.0774;0.87417;0.32237 -;-;-;-;-;-;-;-;-;- 185 + 1 2.45 72068.0 1.0 229 2475 2704 DOHH2_400M_050219_1,2706 DOHH2_400M_050219_1,2706,VVLDNSGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2707 12.121 678.0 130120.0 25 0 10387.0 + 35989 SVQHVDAAEK 10 101 542.2752537012824 0 542.2756835818291 PEAK CID FTMS 0 0 0 2704 96866.8671875 0.96966295517865 1 -0.0297679901123046 3 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 78.11562728322046 0.0003684140278644 1 EAADVHQ 7 9 56.832 0.0 0.0 5.2499 0.0 0.0 146.10548598457189 183.0814005965709 329.18688658114286 0.0 0.0 0.0 0.0 0 3.190614065464281 0.0 0.7742275032520141 0.5 EAADVHQ 5.2499 - 886 1 2.45 71467.0 1.0 230 2475 2704 DOHH2_400M_050219_1,2707 DOHH2_400M_050219_1,2707,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2709 12.129 257.0 343080.0 25 0 41854.0 + 35990 SVQHVDAAEK 10 112 361.8523375159559 0 361.8523437380791 PEAK CID FTMS 0 0 0 2708 184573.359375 0.9668137699835572 -1 0.0297679901123046 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 37.07464296494664 0.1417649821171396 1 VDAAE 5 5 13.506 0.0 0.0 1.8715 0.0 0.0 90.3737307754264 143.0825594537719 233.45629022919832 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5994850021680094 0.0 + VDAAE 1.8715 + + 89 + 1 2.45 75839.3 1.0 231 2476 2708 DOHH2_400M_050219_1,2709 DOHH2_400M_050219_1,2709,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2712 12.144 481.0 138190.0 25 0 30603.0 + 42447 VTFSYGIDKSW 11 74 434.8820771055993 0 434.8821899294853 PEAK CID FTMS 0 0 0 2711 68946.125 0.5103514241383837 34 -0.2213602066040039 1 Unmodified _VTFSYGIDKSW_ REV__ENSG00000132693|ENST00000255030|CRP 4.406150317652783 0.47618401536486 1 A 1 -1 5.4846 0.0 0.0 0.63204 0.0 0.0 362.4869192485048 431.1920565240844 793.6789757725892 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.63204 - 11 + 1 2.45 57751.1 1.0 232 2478 2711 DOHH2_400M_050219_1,2712 DOHH2_400M_050219_1,2712,VTFSYGIDKSW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2715 12.163 764.0 212520.0 25 0 43141.0 -1 KELRNKQMK 9 153 397.5607144485935 1189.6603139459803 3 397.5609313845634 MULTI CID FTMS 0 0 0 2714 75879.0859375 0.2972850084292535 -8 0.1029367446899414 1 Oxidation (M) _KELRNKQM(Oxidation (M))K_ ENSG00000154781|ENST00000383794|CCDC174 10.150570793230772 0.5619192000662246 1 KTT 3 -1 24.425 0.0 0.0 2.0531 0.0 0.0 64.00041683848924 792.4484126207271 856.4488294592164 0.0 0.0 0.0 0.0 0 0.0 0.0 1.424742501084005 0.0 KTT 2.0531 - 155 + 1 2.45 126306.8 1.0 233 2480 2714 DOHH2_400M_050219_1,2715 DOHH2_400M_050219_1,2715,KELRNKQMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2716 12.177 800.0 60181.0 25 0 5625.2 + -1 AGLGECAQWQG 11 87 588.7576159307886 1175.500678928377 2 588.7585937380791 MULTI CID FTMS 0 0 0 2714 84313.359375 0.6792350300441372 16 -0.1256856918334961 2 Carbamidomethyl (C) _AGLGEC(Carbamidomethyl (C))AQWQG_ REV__ENSG00000187862|ENST00000368236|TTC24 8.155526934196011 0.8366696279279818 1 YHDEAQE{[QG]|[NA]} 9 -1 43.963 0.0 0.0 3.7399 0.0 0.0 100.06419570136876 0.0 100.06419570136876 0.0 29.79364375124895 0.0 0.0 0 0.5 0.0 0.0 0.0 YHDEAQE{[QG]|[NA]} 3.7399 - 281 1 2.45 41984.7 0.4000000059604645 234 2480 2714 DOHH2_400M_050219_1,2716 DOHH2_400M_050219_1,2716,AGLGECAQWQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2717 12.191 800.0 44840.0 25 0 2440.2 -1 0 46 927.160544864351 3704.613073591004 4 927.4128906130792 MULTI CID FTMS 0 0 0 2714 75182.734375 1.0 0 0.0 3 1 A 1 -1 5.4846 0.0 0.0 0.14805 0.0 0.0 2695.206173998165 935.3481539361936 3630.5543279343583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.14805 - 4 + 1 2.45 31088.7 0.3600000143051147 235 2480 2714 DOHH2_400M_050219_1,2717 DOHH2_400M_050219_1,2717, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2725 12.232 800.0 175110.0 25 0 8718.5 + 32885 SEIFFWSY 8 184 360.1677817187051 1077.4815157563153 3 360.1670410037041 MULTI CID FTMS 0 0 0 2724 71868.953125 0.4867309163205295 -15 0.1705780029296875 1 Unmodified _SEIFFWSY_ REV__ENSG00000197901|ENST00000360421|SLC22A6;REV__nc|ENSG00000197901|Q4U2R8-3|SLC22A6;REV__nc|ENSG00000197901|Q4U2R8-4|SLC22A6;REV__nc|ENSG00000197901|Q4U2R8|SLC22A6 20.453626601364224 0.6087503291685402 1 SE 2 -1 43.32 0.0 0.0 4.0205 0.0 0.0 0.0 858.3854081960368 858.3854081960368 11.419160778407528 0.0 0.0 0.0 0 0.4124379954164593 1.3979400086720375 0.4247425010840047 0.0 SE 4.0205 + + 269 + 1 2.45 111931.2 0.9900000095367432 236 2487 2724 DOHH2_400M_050219_1,2725 DOHH2_400M_050219_1,2725,SEIFFWSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2728 12.249 625.0 155350.0 25 0 15122.0 23524 LTKVDEAEYM 10 112 400.1948851826304 1197.5628261480913 3 400.1948730349541 MULTI CID FTMS 0 0 0 2727 107155.7890625 0.7562112023831893 -10 0.0921258926391601 1 Unmodified _LTKVDEAEYM_ ENSG00000198822|ENST00000361669|GRM3;nc|ENSG00000198822|Q14832-2|GRM3 2.843284757254958 0.7134846359456997 1 {I|L}T 2 8 14.464 0.0 0.0 1.2078 0.0 0.0 97.98050559380438 882.4276952596201 980.4082008534244 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + {I|L}T 1.2078 + + 87 + 1 2.45 76414.6 1.0 237 2489 2727 DOHH2_400M_050219_1,2728 DOHH2_400M_050219_1,2728,LTKVDEAEYM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2737 12.29 593.0 97793.0 25 0 9801.7 + -1 GVQMLLCKD 9 99 532.2667400847649 1062.5189272363298 2 532.2671386599541 MULTI CID FTMS 0 0 0 2736 82564.8515625 0.7250982367606102 -9 0.045572280883789 1 Carbamidomethyl (C) _GVQMLLC(Carbamidomethyl (C))KD_ REV__ENSG00000147118|ENST00000376943|ZNF182;REV__nc|ENSG00000147118|P17025|ZNF182 8.593279151180031 0.6146971463335029 1 [VG]Q 3 -1 24.195 0.0 0.0 2.2771 0.0 0.0 0.0 775.3484309807235 775.3484309807235 13.665827977365623 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3252574989159953 [VG]Q 2.2771 + + 167 1 2.45 48152.7 1.0 238 2497 2736 DOHH2_400M_050219_1,2737 DOHH2_400M_050219_1,2737,GVQMLLCKD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2743 12.314 261.0 164110.0 25 0 11510.0 250 ADAKDLEQHK 10 97 385.5319558470745 1153.5740381414237 3 385.5316650271416 MULTI CID FTMS 0 0 0 2742 82472.2890625 0.7239426132082174 -10 0.0489711761474609 1 Unmodified _ADAKDLEQHK_ ENSG00000119397|ENST00000373855|CNTRL;nc|ENSG00000119397|Q7Z7A1-2|CNTRL;nc|ENSG00000119397|Q7Z7A1-3|CNTRL;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 8.745405648335112 0.6861838735306406 1 HVG{[CP]|[EA]}EK 7 8 24.34 0.0 0.0 2.11 0.0 0.0 385.1939173300062 0.0 385.1939173300062 0.0 21.56266206075072 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 HVG{[CP]|[EA]}EK 2.11 - 104 + 1 2.45 41168.4 1.0 239 2502 2742 DOHH2_400M_050219_1,2743 DOHH2_400M_050219_1,2743,ADAKDLEQHK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2753 12.354 308.0 192680.0 25 0 21153.0 + 42945 VVSPKSQS 8 93 416.232043338819 830.449533744438 2 416.2319518923759 MULTI CID FTMS 0 0 0 2752 101242.546875 0.7925599319718238 1 -0.0081634521484375 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 20.453626601364224 0.6087503291685402 1 VVSPYVAP 8 4 + 47.186 0.0 0.0 5.682 5.682 81.453 0.0 0.0 0.0 35.19641109986328 0.5036734952992461 0.5036734952992461 4.18366291575822 0 0.4247425010840047 2.0 0.4247425010840047 0.0 VVSPYVAP;VVSPA[VP]Y;VVSPA[YV]P;[VG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QA]VV;[VS][QT][QA]VV 5.682;5.1782;4.8157;0.35508;0.17388 -;-;-;-;- 149 + 1 2.45 53244.0 1.0 240 2511 2752 DOHH2_400M_050219_1,2753 DOHH2_400M_050219_1,2753,VVSPKSQS False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2756 12.367 380.0 138480.0 25 0 11153.0 + 35987 SVQHVDAAEK 10 83 542.2749541338744 1082.5353553345487 2 542.2753784060478 MULTI CID FTMS 0 0 0 2755 123869.3515625 0.5997502918695935 2 -0.0134429931640625 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 62.89396527753397 0.0289947886078699 1 [VS]QHVDAAEK 10 0 + 110.46 0.0 0.0 10.204 10.204 93.588 0.0 0.0 0.0 92.5015175618958 17.914230059397894 17.914230059397894 9.164539485499262 0 2.7971062485323515 2.0 0.4247425010840047 0.7887254899964358 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[VS]AGHVD[DV]GK;[VS][AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]QHVD[DV]GK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AWVHGA[PA];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DAAEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AWVHQ[PA] 10.204;9.3573;6.5481;5.8853;5.6975;5.6662;5.2893;4.6295;4.3896;4.3042 +;-;-;-;-;-;-;-;-;- + 663 + 1 2.45 42771.0 1.0 241 2513 2755 DOHH2_400M_050219_1,2756 DOHH2_400M_050219_1,2756,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2760 12.387 539.0 200590.0 25 0 14115.0 + 35988 SVQHVDAAEK 10 146 361.852716104284 1082.536318913052 3 361.8520385622978 MULTI CID FTMS 0 0 0 2759 98507.8515625 0.2734117470424749 5 -0.0280685424804687 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 16.565877749689598 0.5695826726197942 1 [VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK 11 8 + 23.58 0.0 0.0 2.1782 2.1782 69.906 0.0 0.0 0.0 1.361013809394905 7.584651283878372 1.361013809394905 3.0102999566398125 0 0.6122731327798547 2.0 0.1549471895720985 0.0 [VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;[VS]AG{M(Oxidation (M))|F}AA[Y{I|L}]GK;[WK]HVA[C(Carbamidomethyl (C))S]PV;[WK]H[HA][YN]K;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;[WK]HVA{[CT]|[{M(Oxidation (M))|F}G]}A[PA];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}NAV[{M(Oxidation (M))|F}T]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AA[Y{I|L}]GK;[YR][C(Carbamidomethyl (C))K]N{[QS]|[NT]}K;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}NAA[Y{I|L}]GK 2.1782;1.9001;1.2143;0.75622;0.72012;0.46851;0.45187;0.44204;0.18563;0.17379 -;-;-;-;-;-;-;-;-;- 427 1 2.45 92454.3 1.0 242 2516 2759 DOHH2_400M_050219_1,2760 DOHH2_400M_050219_1,2760,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2766 12.414 435.0 265990.0 25 0 69481.0 -1 KELRNKQMK 9 116 397.5607144485935 1189.6603139459803 3 397.5605651736259 MULTI CID FTMS 0 0 0 2765 107913.5234375 0.4227920292974026 33 -0.2117824554443359 1 Oxidation (M) _KELRNKQM(Oxidation (M))K_ ENSG00000154781|ENST00000383794|CCDC174 15.248480904072842 0.4239247793462406 1 KTT 3 -1 29.297 0.0 0.0 2.4626 0.0 0.0 63.99958145204602 792.4465730413551 856.4461544934012 0.0 0.0 0.0 0.0 0 0.2614393726401688 0.0 1.3494850021680094 0.0 KTT 2.4626 - 102 + 1 2.45 94025.6 1.0 243 2521 2765 DOHH2_400M_050219_1,2766 DOHH2_400M_050219_1,2766,KELRNKQMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2767 12.427 739.0 127280.0 25 0 16884.0 + 34847 SQGFSHSQM 9 122 512.7111195661234 1023.4076861990468 2 512.7114745974541 MULTI CID FTMS 0 0 0 2765 88938.5625 0.3654153053900104 -9 0.0496253967285156 2 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 67.83816525789305 0.0219346420158844 1 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QT{[CA]|SS}S 10 5 + 54.811 0.0 0.0 5.3557 5.3557 76.211 0.0 0.0 0.0 10.553848902070442 27.854034848505044 10.553848902070442 1.2763625255165325 0 1.305462187404089 1.0 0.6861818737241735 0.6989700043360187 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QT{[CA]|SS}S;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}QS;{[QS]|[NT]}{[WN]|[YH]}QT{[CA]|SS}S;{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}QS;{[QS]|[NT]}G[MN]SWQS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}[AG]S;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}QS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}[AG]S;{[QS]|[NT]}{[WN]|[YH]}[AG]{M(Oxidation (M))|F}QS 5.3557;5.231;5.0284;4.909;4.8934;4.3313;4.3313;4.1287;4.004;4.004 -;-;-;-;-;-;-;-;-;- 730 1 2.45 76969.9 1.0 244 2521 2765 DOHH2_400M_050219_1,2767 DOHH2_400M_050219_1,2767,SQGFSHSQM True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2773 12.456 607.0 241110.0 25 0 13542.0 + 7014 EEKPKKEGF 9 151 364.52937460090754 1090.5662944029227 3 364.5290405154228 MULTI CID FTMS 0 0 0 2772 107992.984375 0.5800468381323326 -21 0.12115478515625 1 Unmodified _EEKPKKEGF_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 20.41453444215458 0.284085796332423 1 KPKDKA{M(Oxidation (M))|F} 7 5 30.425 0.0 0.0 2.7899 0.0 0.0 258.0785105579208 0.0 258.0785105579208 0.0 15.821326350417806 0.0 0.0 0 0.5 0.0 0.0 0.0 KPKDKA{M(Oxidation (M))|F} 2.7899 - 193 + 1 2.45 122078.1 1.0 245 2526 2772 DOHH2_400M_050219_1,2773 DOHH2_400M_050219_1,2773,EEKPKKEGF False True EEKPKKEGF 12.455936 364.529040515423 754450.25 2772.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 2.6913458115110798 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2782 12.5 800.0 113820.0 25 0 13770.0 -1 ARLAVEMK 8 109 467.26280452832 932.51105612344 2 467.2636291384697 MULTI CID FTMS 0 0 0 2781 65787.1953125 0.1432493661703337 -44 0.2349424362182617 1 Oxidation (M) _ARLAVEM(Oxidation (M))K_ ENSG00000059573|ENST00000371224|ALDH18A1;nc|ENSG00000059573|P54886-2|ALDH18A1 26.88365393820708 0.4786498634179528 1 T{M(Oxidation (M))|F}K 3 -1 37.479 0.0 0.0 4.0192 0.0 0.0 538.3216880007235 0.0 538.3216880007235 0.0 17.125984483110628 0.0 0.0 0 1.2302046884880935 0.0 0.5 0.0 T{M(Oxidation (M))|F}K 4.0192 - 145 1 2.45 76215.7 0.4099999964237213 246 2534 2781 DOHH2_400M_050219_1,2782 DOHH2_400M_050219_1,2782,ARLAVEMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2785 12.514 394.0 330440.0 25 0 96564.0 7006 EEIVMETRQR 10 81 430.888237071679 0 430.8882934451103 PEAK CID FTMS 0 0 0 2784 316623.03125 0.8508872183633555 -74 0.6409120559692383 1 Unmodified _EEIVMETRQR_ ENSG00000130713|ENST00000372358|EXOSC2;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2 1.6526216038709556 0.3961065659209837 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.45 102922.1 1.0 247 2536 2784 DOHH2_400M_050219_1,2785 DOHH2_400M_050219_1,2785,EEIVMETRQR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2800 12.581 697.0 126060.0 25 0 17354.0 + -1 TPTIRTMK 8 119 482.2681300472578 962.5217071613156 2 482.2681152224541 MULTI CID FTMS 0 0 0 2799 77704.1015625 0.2858835709093869 -7 0.0282564163208007 1 Oxidation (M) _TPTIRTM(Oxidation (M))K_ REV__ENSG00000135447|ENST00000257905|PPP1R1A 24.020572477871973 0.5389365498350341 1 GTTP{I|L}ETCA 9 -1 49.458 0.0 0.0 5.1383 0.0 0.0 71.07405287910312 0.0 71.07405287910312 0.0 28.36404031195839 0.0 0.0 0 0.8161002750754549 0.0 1.1989700043360187 0.0 GTTP{I|L}ETCA 5.1383 - 291 1 2.45 73333.3 1.0 248 2550 2799 DOHH2_400M_050219_1,2800 DOHH2_400M_050219_1,2800,TPTIRTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2801 12.595 800.0 28085.0 25 0 1961.6 -1 0 34 1102.48830045697 3304.443071971111 3 1103.163134753704 MULTI CID FTMS 0 0 0 2799 67928.6484375 1.0 0 0.0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.45 29173.1 0.3199999928474426 249 2550 2799 DOHH2_400M_050219_1,2801 DOHH2_400M_050219_1,2801, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2805 12.615 553.0 213170.0 25 0 27442.0 + 7865 EIGKKREL 8 93 486.7954734657023 971.5763939982046 2 486.7956420779228 MULTI CID FTMS 0 0 0 2804 203713.640625 0.8336268492123794 3 -0.0401792526245117 1 Unmodified _ELLMQLLL_ ENSG00000104320|ENST00000265433|NBN 42.09456458481378 0.1992492688217789 1 {I|L}EGKK{[RE]|[WV]}{I|L} 8 7 + 66.648 0.0 0.0 6.8598 6.8598 84.064 0.0 0.0 0.0 51.26922875713856 4.965394678904929 4.965394678904929 3.2390874094431865 0 0.8494850021680094 2.0 0.5 0.0 {I|L}EGKK{[RE]|[WV]}{I|L};E{I|L}GKK{[RE]|[WV]}{I|L} 6.8598;6.5264 -;- 78 + 1 2.45 94887.1 1.0 250 2553 2804 DOHH2_400M_050219_1,2805 DOHH2_400M_050219_1,2805,ELLMQLLL False False EIGKKREL 12.615227 486.795642077923 805100.5625 2804.0 ENSG00000104320|ENST00000265433|NBN 6.285741488138835 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 2807 12.621 193.0 430380.0 25 0 43671.0 + 28480 PTKGRADLTQ 10 73 543.7986362714303 1085.5827196096604 2 543.7988769412041 MULTI CID FTMS 0 0 0 2806 378650.09375 0.1919697298564758 -38 0.2398509979248047 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 22.65808497894818 0.4596126414678359 1 TPKV[YN]GTP 9 -1 78.466 0.0 0.0 7.228 0.0 0.0 0.0 125.07216821842032 125.07216821842032 63.01583669858815 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.805462187404089 0.0 TPKV[YN]GTP 7.228 - 503 + 1 2.45 69094.0 1.0 251 2554 2806 DOHH2_400M_050219_1,2807 DOHH2_400M_050219_1,2807,PTKGRADLTQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2808 12.629 396.0 172350.0 25 0 11013.0 + 22998 LSHFTLSGPSV 11 136 382.2039466918112 1143.5900106756335 3 382.2036010622978 MULTI CID FTMS 0 0 0 2806 98432.09375 0.6821565126243786 -8 0.0649375915527343 2 Unmodified _LSHFTLSGPSV_ REV__nc|ENSG00000170983|Q96KT6|LINC00208 21.53697664764585 0.586507868110548 1 [YV][HV]SD[KP]TV 10 -1 + 36.264 0.0 0.0 3.1711 3.1711 75.185 0.0 0.0 0.0 1.478174818886373 15.50205170418435 1.478174818886373 6.505371545832933 0 0.0 1.6989700043360187 1.1861818737241734 0.0 [YV][HV]SD[KP]TV;[KP]{[ES]|[DT]|[{I|L}C]}GSD[KP]TV;[KP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}SD[KP]TV;[{M(Oxidation (M))|F}T][H{I|L}]SD[KP]TV 3.1711;2.6022;1.59;1.4503 -;-;-;- 218 1 2.45 61351.4 1.0 252 2554 2806 DOHH2_400M_050219_1,2808 DOHH2_400M_050219_1,2808,LSHFTLSGPSV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2809 12.638 559.0 127780.0 25 0 10652.0 + 35731 SVHNELEK 8 93 478.24631049498254 954.4780680567652 2 478.2463867068291 MULTI CID FTMS 0 0 0 2806 114238.3984375 0.991436532939322 -11 0.077127456665039 3 Unmodified _SVHNELEK_ ENSG00000213347|ENST00000439742|MXD3;ENST00000503473.5_1_5:176737667-176737736:-|nuORF;nc|ENSG00000213347|Q9BW11-3|MXD3;nc|ENSG00000213347|Q9BW11-4|MXD3 37.97399986684836 0.2681860861828418 1 [VS]HVDAAEK 9 4 + 60.471 0.0 0.0 6.3355 6.3355 92.019 0.0 0.0 0.0 37.318372474236256 9.515742229021512 9.515742229021512 15.590292461168204 0 1.174742501084005 1.6989700043360187 0.3494850021680094 0.2887254899964357 [VS]HVDAAEK;[VS]HVD[KA]{[CP]|[EA]};[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{M(Oxidation (M))|F}EK;[VS]H[DG][{I|L}A]EK;[VS]H[DG][K{I|L}]{[CP]|[EA]};[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MG]|[TS]}{[WT]|[RM]};[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]} 6.3355;4.7022;3.3462;3.2546;1.6212;0.98048;0.56356 -;-;-;-;-;-;- 137 + 1 2.45 61679.6 1.0 253 2554 2806 DOHH2_400M_050219_1,2809 DOHH2_400M_050219_1,2809,SVHNELEK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2811 12.643 39.0 1247400.0 25 0 63382.0 + 38118 TPLYFFISV 9 98 362.8684781398067 1085.58360501962 3 362.8681823611259 MULTI CID FTMS 0 0 0 2810 1292952.5 0.2355435741106423 -28 0.1824445724487304 1 Unmodified _TPLYFFISV_ ENSG00000180433|ENST00000641861|OR6K6;nc|ENSG00000180433|Q8NGW6|OR6K6 34.10243960390752 0.1078313939113124 1 [TP]KGS[SG]RPTV 11 8 + 55.142 0.0 0.0 5.0795 5.0795 56.873 0.0 0.0 0.0 1.492213803060558 9.758276371937278 1.492213803060558 0.0 0 0.8935078169319297 1.6989700043360187 0.8494850021680094 0.3054621874040891 [TP]KGS[SG]RPTV;[TP]KGS{[NV]|[RG]}SPTV;[KP]G{[WS]|[C(Carbamidomethyl (C)){I|L}]}SKPTV;[KP]GTS[SG]RPTV;[KP]GTS{[NV]|[RG]}SPTV;[PG]K{[WS]|[C(Carbamidomethyl (C)){I|L}]}SKPTV;[KP]G{[WS]|[C(Carbamidomethyl (C)){I|L}]}KSPTV;{[VA]|[{I|L}G]}RGS[DG]KPTV;[PG]KTS[SG]RPTV;[PG]KTS{[NV]|[RG]}SPTV 5.0795;5.0795;4.9421;4.6019;4.6019;4.5418;4.3141;4.3047;4.2016;4.2016 -;-;-;-;-;-;-;-;-;- 1644 1 2.45 53349.5 1.0 254 2555 2810 DOHH2_400M_050219_1,2811 DOHH2_400M_050219_1,2811,TPLYFFISV True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2817 12.674 677.0 134480.0 25 0 60593.0 -1 TLLPQRCGY 9 73 554.2843266959783 1106.5541004587565 2 554.2836791872978 MULTI CID FTMS 0 0 0 2816 112962.84375 0.7754365329932246 -8 0.0603141784667968 1 Carbamidomethyl (C) _TLLPQRC(Carbamidomethyl (C))GY_ ENSG00000139266|ENST00000266643|MARCHF9;nc|ENSG00000139266|Q86YJ5-2|MARCHF9 4.75600775471527 0.7486543447549536 1 Y 1 -1 12.218 0.0 0.0 1.1042 0.0 0.0 925.4808562954736 0.0 925.4808562954736 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1042 + + 3 + 1 2.45 74047.7 1.0 255 2560 2816 DOHH2_400M_050219_1,2817 DOHH2_400M_050219_1,2817,TLLPQRCGY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2825 12.714 800.0 85560.0 25 0 8239.4 + 394 AEDQRTSTY 9 102 535.7407874273594 1069.4670219215186 2 535.7416869997978 MULTI CID FTMS 0 0 0 2824 59465.21875 0.6778666771160992 -6 0.0240564346313476 1 Unmodified _AEDQRTSTY_ ENSG00000101445|ENST00000299824|PPP1R16B;nc|ENSG00000101445|Q96T49-2|PPP1R16B 65.47368725323818 0.0230515101691092 1 AEDQA 5 5 62.761 0.0 0.0 5.8684 0.0 0.0 0.0 552.2545260065061 552.2545260065061 34.57325943207756 0.0 0.0 0.0 0 0.6549471895720985 2.0 0.0 0.3252574989159953 AEDQA 5.8684 - 207 + 1 2.45 58449.3 0.4199999868869781 256 2567 2824 DOHH2_400M_050219_1,2825 DOHH2_400M_050219_1,2825,AEDQRTSTY True True AEDQRTSTY 12.713993 535.741686999798 691139.5625 2824.0 nc|ENSG00000101445|Q96T49-2|PPP1R16B;;ENSG00000101445|ENST00000299824|PPP1R16B 7.538927555084228 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2829 12.734 542.0 213660.0 25 0 137890.0 + 40100 VGKGSGSG 8 43 648.3311169591157 647.3238404925156 1 648.3312255740166 MULTI CID FTMS 0 0 0 2828 187860.171875 0.2951823199135241 -47 0.2915220260620117 1 Unmodified _VGKGSGSG_ REV__ENSG00000203782|ENST00000368742|LORICRIN 5.230669730166228 0.792582437072536 1 {[RE]|[WV]}A{[CA]|SS}V 6 -1 + 25.903 0.0 0.0 4.0015 4.0015 85.101 0.0 0.0 0.0 12.191512336730028 7.703037561203839 7.703037561203839 25.90288749933073 0 0.0 0.0 0.0 0.9247425010840048 {[RE]|[WV]}A{[CA]|SS}V 4.0015 - 12 1 2.45 88809.0 1.0 257 2570 2828 DOHH2_400M_050219_1,2829 DOHH2_400M_050219_1,2829,VGKGSGSG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2830 12.748 800.0 56399.0 25 0 4507.0 + -1 SPTQFTMWNWG 11 73 685.7947361141761 1369.574919295152 2 685.7950927615166 MULTI CID FTMS 0 0 0 2828 80468.828125 0.8752438783973026 1 -0.0259075164794921 2 Oxidation (M) _SPTQFTM(Oxidation (M))WNWG_ REV__ENST00000409016.8_1_2:99205452-99205602:+|nuORF 9.38312468134398 0.8308777417566128 1 GQTA[WR] 6 -1 36.643 0.0 0.0 2.6755 0.0 0.0 652.243944236525 0.0 652.243944236525 0.0 3.20947833959287 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 GQTA[WR] 2.6755 - 99 1 2.45 38492.6 0.3799999952316284 258 2570 2828 DOHH2_400M_050219_1,2830 DOHH2_400M_050219_1,2830,SPTQFTMWNWG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2832 12.754 201.0 354140.0 25 0 60910.0 -1 IRAPTTMK 8 80 467.26280452832 932.51105612344 2 467.2630187869072 MULTI CID FTMS 0 0 0 2831 383910.5625 0.8359521101786794 -7 0.0624685287475585 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 19.256988751693697 0.6264283240490721 1 KTT 3 -1 35.177 0.0 0.0 3.7723 0.0 0.0 63.9984442241933 535.2996731741162 599.2981173983095 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 1.3494850021680094 0.0 KTT 3.7723 - 110 + 1 2.45 65156.4 1.0 259 2571 2831 DOHH2_400M_050219_1,2832 DOHH2_400M_050219_1,2832,IRAPTTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2835 12.766 251.0 308250.0 25 0 103940.0 18422 KVWFYNFRM 9 59 430.888237071679 0 430.8882324099541 PEAK CID FTMS 0 0 0 2834 296585.65625 0.7970391258549131 -37 0.2540607452392578 1 Unmodified _KVWFYNFRM_ ENST00000487998.5_1_10:92631743-92654759:+|nuORF 0.5247636613948944 0.3444685223463735 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.45 67734.5 1.0 260 2573 2834 DOHH2_400M_050219_1,2835 DOHH2_400M_050219_1,2835,KVWFYNFRM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2836 12.78 800.0 24897.0 25 0 7068.6 -1 0 29 1055.4101016825932 3163.20847564798 3 1055.744189441204 MULTI CID FTMS 0 0 0 2834 52052.8125 0.5630422582534549 1 -0.0210752487182617 2 1 G 1 -1 5.4846 0.0 0.0 0.17339 0.0 0.0 1856.6611866848923 1246.5093477838502 3103.1705344687425 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.17339 - 1 + 1 2.45 27425.2 0.3499999940395355 261 2573 2834 DOHH2_400M_050219_1,2836 DOHH2_400M_050219_1,2836, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2840 12.795 271.0 215660.0 25 0 16311.0 2580 ASKATELENKN 11 93 402.21026317226574 1203.6089601169972 3 402.2101013064384 MULTI CID FTMS 0 0 0 2839 130270.9765625 0.8092578419415567 1 -0.0490102767944335 1 Unmodified _ASKATELENKN_ ENSG00000145734|ENST00000358731|BDP1;ENST00000508917.6_1_5:70751704-70841064:+|nuORF;nc|ENSG00000145734|A6H8Y1-2|BDP1;nc|ENSG00000145734|A6H8Y1-6|BDP1;nc|ENSG00000145734|A6H8Y1-7|BDP1;nc|ENSG00000145734|A6H8Y1-8|BDP1 7.846045518447754 0.8381297814158264 1 {[SA]|[TG]}T[WK]{I|L}C(Carbamidomethyl (C))PNK 10 7 + 51.218 0.0 0.0 4.2553 4.2553 80.876 0.0 0.0 0.0 34.306403160665084 5.821429737092757 5.821429737092757 9.164539485499256 0 0.2887254899964357 1.6989700043360187 0.0 0.5228787452803376 {[SA]|[TG]}T[WK]{I|L}C(Carbamidomethyl (C))PNK;{[SA]|[TG]}T[WK]{I|L}[CG]PNK;{[SA]|[TG]}T[WK]{I|L}C(Carbamidomethyl (C))PGGK;{[SA]|[TG]}T[WK]{I|L}HH[QP];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WQ]{I|L}AADNK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WK]{I|L}AADNK;{[SA]|[TG]}T[WK]{I|L}HHA[PG];{[SA]|[TG]}T[WK]{I|L}AHH[PG];{[SA]|[TG]}T[WK]{I|L}C(Carbamidomethyl (C))[KG][PG];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WK]{I|L}AADGGK 4.2553;3.4939;3.4939;2.6621;2.3538;2.3538;2.2313;2.1275;1.7969;1.5924 -;-;-;-;-;-;-;-;-;- 346 + 1 2.45 49663.7 1.0 262 2576 2839 DOHH2_400M_050219_1,2840 DOHH2_400M_050219_1,2840,ASKATELENKN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2841 12.809 800.0 123640.0 25 0 5316.9 7467 EGQQEKWWS 9 117 589.265266923251 1176.515980913302 2 589.2643310427666 MULTI CID FTMS 0 0 0 2839 98731.7890625 0.5325000389757427 -15 0.11395263671875 2 Unmodified _EGQQEKWWS_ LTR2C_dup54|chr2:231400712-231401206:+|1.0484764819261394|0.310476164059117|1.76|48.0|26|1|anti-sense 27.628801355627647 0.1796483985696185 1 DQQAEWQGQ 9 7 62.018 0.0 0.0 5.2714 0.0 0.0 88.06311966700385 0.0 88.06311966700385 0.0 41.15923081670391 0.0 0.0 0 0.3494850021680094 0.0 0.3252574989159953 1.4916440611282626 DQQAEWQGQ 5.2714 - 2756 + 1 2.45 76549.4 0.4199999868869781 263 2576 2839 DOHH2_400M_050219_1,2841 DOHH2_400M_050219_1,2841,EGQQEKWWS False False False False ERV PXD020620_cell_line DOHH2_400M_050219_1 2842 12.823 800.0 132900.0 25 0 17289.0 + 41148 VPAKKITAA 9 122 449.7896275875763 897.5647022419527 2 449.7895385622978 MULTI CID FTMS 0 0 0 2839 88011.40625 0.4662925826951546 -9 0.0898962020874023 3 Unmodified _VPAKKITAA_ ENSG00000188846|ENST00000396203|RPL14 34.40172386719151 0.1061884637610825 1 VPAK[K{I|L}]TAA 9 0 + 59.09 0.0 0.0 6.5833 6.5833 93.362 0.0 0.0 0.0 39.12437668692225 4.078316200367041 4.078316200367041 21.008337601396853 0 0.9517188504113844 2.0 0.805462187404089 0.0 + + VPAK[K{I|L}]TAA;VAPK[K{I|L}]TAA;[PA]KK{I|L}TAAV;[TA]{I|L}KKPAAV;[{I|L}T]AKKPAAV;[KP][KA]{I|L}TAAV;[TA][K{I|L}]KAPAV;VA[VS]KK{I|L}GP;[{I|L}T][KA]KAPAV;VA[VS]KKAVP 6.5833;4.2428;3.1621;2.9267;2.5089;2.2108;2.0896;1.7118;1.6718;1.5156 +;-;-;-;-;-;-;-;-;- + 285 + 1 2.45 85077.2 0.4000000059604645 264 2576 2839 DOHH2_400M_050219_1,2842 DOHH2_400M_050219_1,2842,VPAKKITAA True True VPAKKITAA 12.822694 449.789538562298 2431651.0 2839.0 ENSG00000188846|ENST00000396203|RPL14 4.586087544759114 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2843 12.837 800.0 87163.0 25 0 5262.8 -1 ELMKLSPEEL 10 98 602.8118370087448 1203.6091210842894 2 602.8121215701103 MULTI CID FTMS 0 0 0 2839 100073.6640625 0.8805573482177302 -1 0.0040616989135742 4 Oxidation (M) _ELM(Oxidation (M))KLSPEEL_ ENSG00000102024|ENST00000355899|PLS3;ENSG00000120756|ENST00000457734|PLS1;nc|ENSG00000102024|P13797-2|PLS3;nc|ENSG00000102024|P13797-3|PLS3 20.41453444215458 0.5050059513928961 1 {[SA]|[TG]}TADK{I|L}AADNK 12 -1 + 130.14 0.0 0.0 10.812 10.812 93.041 0.0 0.0 0.0 112.83336940299029 17.721058182547978 17.721058182547978 9.098233696509112 0 2.7856668758921828 1.0969100130080565 0.0 1.6976212463643423 {[SA]|[TG]}TADK{I|L}AADNK;{[SA]|[TG]}TADK{I|L}AADGGK;VC(Carbamidomethyl (C))WK{I|L}AADNK;V[CG]WK{I|L}AADNK;VC(Carbamidomethyl (C))WK{I|L}AADGGK;V[CG]WK{I|L}AADGGK;VC(Carbamidomethyl (C))ADK[RV]DNK;{[SA]|[TG]}TWRRADNK;VC(Carbamidomethyl (C))WK[RV]DNK;V[CG]ADK[RV]DNK 10.812;10.056;9.8225;9.0611;9.0611;8.3027;7.7465;7.4067;7.2037;6.985 -;-;-;-;-;-;-;-;-;- 2528 + 1 2.45 55591.1 0.4199999868869781 265 2576 2839 DOHH2_400M_050219_1,2843 DOHH2_400M_050219_1,2843,ELMKLSPEEL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2845 12.848 446.0 182610.0 25 0 27960.0 + -1 GVGNKLTMK 9 101 482.2681300472578 962.5217071613156 2 482.2680541872978 MULTI CID FTMS 0 0 0 2844 152876.5625 0.5624529042485455 20 -0.1428394317626953 1 Oxidation (M) _GVGNKLTM(Oxidation (M))K_ REV__ENST00000604354.1_1_5:180743383-180748792:+|nuORF 30.63653989081413 0.1413794767160703 1 KTE{I|L}PTTG 8 -1 57.755 0.0 0.0 6.0004 0.0 0.0 63.99877684377402 68.05124841861561 132.05002526238962 0.0 0.0 0.0 0.0 0 0.5 0.0 1.9124379954164592 0.0 KTE{I|L}PTTG 6.0004 - 298 + 1 2.45 68210.1 1.0 266 2577 2844 DOHH2_400M_050219_1,2845 DOHH2_400M_050219_1,2845,GVGNKLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2846 12.862 800.0 196570.0 25 0 12933.0 + 19981 LIKHKPSV 8 121 461.2977746479366 920.5809963626732 2 461.2979308962822 MULTI CID FTMS 0 0 0 2844 134112.8125 0.7030446138071703 -2 0.0530719757080078 2 Unmodified _LIKHKPSV_ ENSG00000146731|ENST00000275603|CCT6A;ENST00000492618.5_1_7:56127237-56129562:+|nuORF;nc|ENSG00000146731|P40227-2|CCT6A 53.832793166522166 0.1212192986213991 1 {I|L}{I|L}KHKVSP 8 2 + 81.751 0.0 0.0 8.8804 8.8804 87.119 0.0 0.0 0.0 36.409780573583326 3.15325575224334 3.15325575224334 3.15325575224334 0 0.9361818737241736 2.0 1.024227503252014 0.4247425010840047 {I|L}{I|L}KHKVSP;{I|L}{I|L}KHKPSV;[HK]K{I|L}{I|L}PSV;[HK]K[PS]{I|L}{I|L}V;[K{I|L}][HK]{I|L}PSV 8.8804;8.5378;2.3926;0.5838;0.30022 -;+;-;-;- + 197 + 1 2.45 125476.1 0.5199999809265137 267 2577 2844 DOHH2_400M_050219_1,2846 DOHH2_400M_050219_1,2846,LIKHKPSV True True LIKHKPSV 12.862127 461.297930896282 869066.125 2844.0 nc|ENSG00000146731|P40227-2|CCT6A;;ENSG00000146731|ENST00000275603|CCT6A;;ENST00000492618.5_1_7:56127237-56129562:+|nuORF 2.996596892674764 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2849 12.871 32.0 1933300.0 25 0 181420.0 + 28481 PTKGRADLTQ 10 61 543.7986362714303 1085.5827196096604 2 543.7989990115166 MULTI CID FTMS 0 0 0 2848 1956140.0 0.991732667071198 -13 0.1724710464477539 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 28.49450938151212 0.328477364964909 1 TPKG[YR]GTP 9 -1 77.401 0.0 0.0 7.1299 0.0 0.0 0.0 125.07224451236564 125.07224451236564 59.4420594384119 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.7742275032520141 0.4247425010840047 TPKG[YR]GTP 7.1299 - 174 + 1 2.45 53959.6 1.0 268 2579 2848 DOHH2_400M_050219_1,2849 DOHH2_400M_050219_1,2849,PTKGRADLTQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2856 12.896 9.7 4502400.0 25 0 229310.0 38119 TPLYFFISV 9 85 362.8684781398067 1085.58360501962 3 362.8683654665947 MULTI CID FTMS 0 0 0 2855 5279832.5 0.9618532914051584 2 -0.0088539123535156 1 Unmodified _TPLYFFISV_ ENSG00000180433|ENST00000641861|OR6K6;nc|ENSG00000180433|Q8NGW6|OR6K6 28.486842064014134 0.1687311288560894 1 [TP]K[DN]G[R{I|L}]SV 10 5 + 47.418 0.0 0.0 4.368 4.368 75.852 0.0 0.0 0.0 9.71726222832956 24.48638135581298 9.71726222832956 3.424226808222066 0 1.305462187404089 1.5228787452803376 1.2302046884880935 0.0 [TP]K[DN]G[R{I|L}]SV;[TP]KG[DG]G[R{I|L}]SV;[TP]KG[DN][R{I|L}]SV;[TP]KGS[SG]R[TP]V;[KP]T[DN]G[R{I|L}]SV;[KP]TG[DG]G[R{I|L}]SV;[KP]TG[DN][R{I|L}]SV;[KP]G{[WS]|[C(Carbamidomethyl (C)){I|L}]}SK[TP]V;[KP]TGS[SG]R[TP]V;{[VA]|[{I|L}G]}RGSDGK[TP]V 4.368;4.0526;4.0014;3.609;3.4047;3.0893;3.0381;2.7368;2.6457;2.5734 -;-;-;-;-;-;-;-;-;- 718 1 2.45 46779.6 1.0 269 2585 2855 DOHH2_400M_050219_1,2856 DOHH2_400M_050219_1,2856,TPLYFFISV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2862 12.928 800.0 68446.0 25 0 5860.3 7699 EKWCFNWM 8 84 572.2413009555053 1142.4680489778104 2 572.2415038943291 MULTI CID FTMS 0 0 0 2861 62939.890625 0.60546638117035 -5 0.0208711624145507 1 Unmodified _EKWCFNWM_ ENST00000206595.10_1_14:31061530-31061584:+|nuORF 9.347437153973935 0.7675937258251505 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WQ]SEEK 8 5 26.944 0.0 0.0 2.3584 0.0 0.0 0.0 94.95402185773553 94.95402185773553 10.538762827335256 0.0 0.0 0.0 0 0.0 0.0 1.1203715150305282 0.2887254899964357 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WQ]SEEK 2.3584 - 454 1 2.45 46162.4 0.4399999976158142 270 2590 2861 DOHH2_400M_050219_1,2862 DOHH2_400M_050219_1,2862,EKWCFNWM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2866 12.945 337.0 183670.0 25 0 10181.0 -1 HGRFKRRM 8 93 368.5379359028287 1102.591978308686 3 368.5372802615166 MULTI CID FTMS 0 0 0 2865 99974.21875 0.5397063105575896 -9 0.0494585037231445 1 Oxidation (M) _HGRFKRRM(Oxidation (M))_ ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8 3.944395688203298 0.8003900995685364 1 {M(Oxidation (M))|F} 1 -1 16.99 0.0 0.0 1.5409 0.0 0.0 937.5456659080986 0.0 937.5456659080986 0.0 -2.95880017344075 -2.95880017344075 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.5409 + + 28 + 1 2.45 56314.5 1.0 271 2593 2865 DOHH2_400M_050219_1,2866 DOHH2_400M_050219_1,2866,HGRFKRRM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2867 12.959 800.0 110800.0 25 0 20237.0 + -1 MKNNRKLSP 9 100 552.3029427703161 1102.5913326074322 2 552.3031494021416 MULTI CID FTMS 0 0 0 2865 93440.3984375 0.4403144646030548 -15 0.0743637084960937 2 Oxidation (M) _M(Oxidation (M))KNNRKLSP_ REV__ENST00000485853.5_1_3:174577149-174974391:+|nuORF 7.289230182591677 0.6602208344931196 1 E{M(Oxidation (M))|F} 2 -1 21.211 0.0 0.0 1.9238 0.0 0.0 808.5005104251682 0.0 808.5005104251682 0.0 10.373919726131886 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 E{M(Oxidation (M))|F} 1.9238 - 62 1 2.45 73330.6 0.4300000071525574 272 2593 2865 DOHH2_400M_050219_1,2867 DOHH2_400M_050219_1,2867,MKNNRKLSP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2870 12.975 553.0 118230.0 25 0 12501.0 + + -1 SQGFSHSQM 9 115 513.2030046532102 1024.3914563732203 2 513.2045776247978 MULTI CID FTMS 0 0 0 2869 78264.7265625 0.2229312552050528 -15 0.0920562744140625 1 Carbamidomethyl (C) _SQGGTWTC(Carbamidomethyl (C))E_ ENSG00000181143|ENST00000397910|MUC16 36.12702656103203 0.0967173616627612 1 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}ETN{M(Oxidation (M))|F} 9 -1 + 58.386 0.0 0.0 5.6996 5.6996 82.651 0.0 0.0 0.0 14.13155781996258 2.977015083287497 2.977015083287497 5.496812376923046 0 1.1677353201839438 1.0969100130080565 1.0994850021680094 0.6382104921644451 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}ETN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}TEN{M(Oxidation (M))|F};{[QS]|[NT]}GMDSW{[QS]|[NT]};{[QS]|[NT]}GMD{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}GM{[NV]|[RG]}EN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}ETN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G{M(Oxidation (M))|F}SD[HT]{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}TEN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SD[C(Carbamidomethyl (C))Q]P 5.6996;5.163;4.9929;4.7694;4.6972;4.4442;4.3865;4.3201;3.9076;3.1446 -;-;-;-;-;-;-;-;-;- 468 1 2.45 54397.3 1.0 273 2595 2869 DOHH2_400M_050219_1,2870 DOHH2_400M_050219_1,2870,SQGGTWTCE False False SQGFSHSQM 12.975281 513.204577624798 0.0 2869.0 ENSG00000181143|ENST00000397910|MUC16 4.078521251678467 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 2873 12.996 800.0 129780.0 25 0 8036.7 + 32237 RWMGSKGF 8 130 484.7429765483191 967.4714001634384 2 484.7437927126884 MULTI CID FTMS 0 0 0 2872 30272.759765625 0.3485169843099088 1 -0.0164079666137695 1 Unmodified _RWMGSKGF_ REV__ENST00000591935.5_1_19:1274361-1274472:+|nuORF 32.30548876998284 0.3644845974844379 1 [TP]KGTTGKP 9 -1 44.943 0.0 0.0 4.6454 0.0 0.0 0.0 96.99234081565932 96.99234081565932 12.364955074869684 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 1.7128493362984765 0.0 [TP]KGTTGKP 4.6454 - 2947 1 2.45 82840.4 0.4199999868869781 274 2597 2872 DOHH2_400M_050219_1,2873 DOHH2_400M_050219_1,2873,RWMGSKGF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2876 13.006 185.0 372080.0 25 0 58793.0 + -1 NKVANLMK 8 85 467.26280452832 932.51105612344 2 467.2628661990166 MULTI CID FTMS 0 0 0 2875 363781.09375 0.7921208809237191 21 -0.1769742965698242 1 Oxidation (M) _NKVANLM(Oxidation (M))K_ REV__ENSG00000254685|ENST00000370898|FPGT;REV__nc|ENSG00000254685|O14772-2|FPGT;REV__nc|ENSG00000254685|O14772|FPGT 16.942295170755138 0.6606234159769251 1 KT{I|L}P[WP]K 7 -1 52.44 0.0 0.0 5.6235 0.0 0.0 63.99932091588034 0.0 63.99932091588034 0.0 35.44486029786043 0.0 0.0 0 1.274227503252014 0.0 0.9247425010840048 0.3494850021680094 KT{I|L}P[WP]K 5.6235 - 130 + 1 2.45 62668.6 1.0 275 2599 2875 DOHH2_400M_050219_1,2876 DOHH2_400M_050219_1,2876,NKVANLMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2877 13.016 597.0 165680.0 25 0 17136.0 + 42946 VVSPKSQS 8 118 416.2320067372174 830.4494605412348 2 416.2322265505791 MULTI CID FTMS 0 0 0 2875 153984.734375 0.9581676920803324 1 -0.0165386199951171 2 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 20.453626601364224 0.6087503291685402 1 VVSPASSGK 9 4 + 54.797 0.0 0.0 6.5985 6.5985 91.435 0.0 0.0 0.0 34.29552517336927 6.332341046349072 6.332341046349072 11.16546083601606 0 0.805462187404089 2.0 0.7134679910804405 0.3778623208748889 VVSPASSGK;VVSPYVAP;VVSE{[NV]|[RG]}GK;VVSPA[YV]P 6.5985;5.254;5.0721;4.3916 -;-;-;- 186 + 1 2.45 79899.6 1.0 276 2599 2875 DOHH2_400M_050219_1,2877 DOHH2_400M_050219_1,2877,VVSPKSQS False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 2885 13.054 645.0 164680.0 25 0 12432.0 -1 0 148 385.2073408781302 384.2000644115302 1 385.2073852419853 MULTI CID FTMS 0 0 0 2884 64675.66796875 0.0385822046564228 -208 1.832152366638184 1 1 K 1 -1 12.842 0.0 0.0 3.3424 0.0 0.0 238.0944410978568 0.0 238.0944410978568 0.0 2.357023806388252 0.0 0.0 0 0.0 0.0 0.0 0.1421590589602531 K 3.3424 - 26 + 1 2.45 88000.0 1.0 277 2606 2884 DOHH2_400M_050219_1,2885 DOHH2_400M_050219_1,2885, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2889 13.079 800.0 137410.0 25 0 17020.0 + 41149 VPAKKITAA 9 119 449.7896275875763 897.5647022419527 2 449.7891113162041 MULTI CID FTMS 0 0 0 2888 71541.4453125 0.3790332040571137 24 -0.2856569290161133 1 Unmodified _VPAKKITAA_ ENSG00000188846|ENST00000396203|RPL14 16.149105407346934 0.3995459350917656 1 VPAK 4 5 46.609 0.0 0.0 5.1928 0.0 0.0 0.0 499.2896212213501 499.2896212213501 30.49930701001106 0.0 0.0 0.0 0 0.4916440611282625 1.6989700043360187 0.0 0.0 + VPAK 5.1928 + + 184 + 1 2.45 88833.9 0.4900000095367431 278 2609 2888 DOHH2_400M_050219_1,2889 DOHH2_400M_050219_1,2889,VPAKKITAA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2890 13.093 800.0 102510.0 25 0 3946.9 + 35370 STDSAGSSY 9 82 874.3428929193124 873.3356164527123 1 874.3437377810478 MULTI CID FTMS 0 0 0 2888 93171.9765625 0.2870871075160507 -30 0.1963119506835937 2 Unmodified _STDSAGSSY_ chr9:37006537-37020636|47|27.0|0.12|7.82|-|ENST00000446742|PAX5,PAX5;ENSG00000196092|ENST00000358127|PAX5;nc|ENSG00000196092|Q02548-10|PAX5;nc|ENSG00000196092|Q02548-11|PAX5;nc|ENSG00000196092|Q02548-2|PAX5;nc|ENSG00000196092|Q02548-3|PAX5;nc|ENSG00000196092|Q02548-4|PAX5;nc|ENSG00000196092|Q02548-5|PAX5;nc|ENSG00000196092|Q02548-6|PAX5;nc|ENSG00000196092|Q02548-7|PAX5 123.45060196383646 0.000255189003501 1 {[MG]|[TS]}DSAGSSY 9 0 + 82.352 0.0 0.0 9.4296 9.4296 92.192 0.0 0.0 0.0 4.762036441594191 33.719297618324035 4.762036441594191 8.46787486224656 0 1.91944517631652 0.0 2.586696871556164 0.0 + + {[MG]|[TS]}DSAGSSY;{[MG]|[TS]}DSQSSY;{[CA]|SS}ESAGSSY;{[MG]|[TS]}NSESSY;{[CA]|SS}ESQSSY;{[MG]|[TS]}DNTSSY;{[MG]|[TS]}NDTSSY;{[CA]|SS}QSESSY;{[CA]|SS}ENTSSY;{[MG]|[TS]}DGGTSSY 9.4296;8.46;8.3698;7.574;7.4002;7.1638;6.8469;6.5142;6.1041;6.1033 +;-;-;-;-;-;-;-;-;- + 1017 1 2.45 61214.3 0.4099999964237213 279 2609 2888 DOHH2_400M_050219_1,2890 DOHH2_400M_050219_1,2890,STDSAGSSY True True STDSAGSSY 13.092703 874.343737781048 14303079.0 2888.0 nc|ENSG00000196092|Q02548-11|PAX5;;nc|ENSG00000196092|Q02548-4|PAX5;;PAX5|p.L185V|1|0.22|ENSG00000196092|chr9:37002699-37002699|G/C|missense_variant;;nc|ENSG00000196092|Q02548-3|PAX5;;nc|ENSG00000196092|Q02548-6|PAX5;;nc|ENSG00000196092|Q02548-7|PAX5;;nc|ENSG00000196092|Q02548-10|PAX5;;chr9:37006537-37020636|47|27.0|0.12|7.82|-|ENST00000446742|PAX5,PAX5;;nc|ENSG00000196092|Q02548-2|PAX5;;nc|ENSG00000196092|Q02548-5|PAX5;;ENSG00000196092|ENST00000358127|PAX5 9.241727193196615 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2891 13.098 301.0 156950.0 25 0 20736.0 + 13092 HEISNDPS 8 79 449.698495215152 897.3824374971041 2 449.6989623904228 MULTI CID FTMS 0 0 0 2888 86397.09375 1.0 0 0.0 3 Unmodified _HEISNDPS_ REV__ENSG00000204304|ENST00000375050|PBX2;REV__ENST00000478678.5_1_6:32154995-32157692:-|nuORF 7.289230182591677 0.7800870086367542 1 S 1 -1 13.495 0.0 0.0 1.5038 0.0 0.0 792.3394896595049 0.0 792.3394896595049 0.0 2.657394585211277 0.0 0.0 0 0.0 0.0 0.0 0.0 S 1.5038 + + 45 + 1 2.45 42052.1 1.0 280 2609 2888 DOHH2_400M_050219_1,2891 DOHH2_400M_050219_1,2891,HEISNDPS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2894 13.119 800.0 38836.0 25 0 2762.7 -1 0 43 928.9045201606228 1855.794487388045 2 929.4047119021416 MULTI CID FTMS 0 0 0 2893 41535.3046875 0.3537442092183422 -8 0.0738658905029296 1 1 ATQG 4 -1 29.157 0.0 0.0 1.5711 0.0 0.0 846.3868590620751 649.2213839166624 1495.6082429787375 0.0 0.0 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 ATQG 1.5711 - 51 + 1 2.45 28125.3 0.3799999952316284 281 2611 2893 DOHH2_400M_050219_1,2894 DOHH2_400M_050219_1,2894, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2895 13.132 800.0 214520.0 25 0 16450.0 + 8932 FAMESELRP 9 171 360.5100434237952 1078.5083008715856 3 360.5098449587822 MULTI CID FTMS 0 0 0 2893 101972.0078125 0.9921078562824296 -12 0.1024255752563476 2 Unmodified _FAMESELRP_ REV__nc|ENSG00000127252|Q9HDD0-2|PLAAT1 8.593279151180031 0.6146971463335029 1 PR 2 -1 21.211 0.0 0.0 1.9667 0.0 0.0 807.3437553397869 0.0 807.3437553397869 0.0 8.4471653193118 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 PR 1.9667 - 260 + 1 2.45 138744.9 0.3899999856948852 282 2611 2893 DOHH2_400M_050219_1,2895 DOHH2_400M_050219_1,2895,FAMESELRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2897 13.137 112.0 514570.0 25 0 51971.0 + 28482 PTKGRADLTQ 10 64 543.7986362714303 1085.5827196096604 2 543.7989379763603 MULTI CID FTMS 0 0 0 2896 442874.375 0.2245304452116105 20 -0.19927978515625 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 17.44264345198275 0.5548713957087773 1 TPKV[YN]GTP 9 -1 72.898 0.0 0.0 6.7151 0.0 0.0 0.0 125.07215295963124 125.07215295963124 67.41312192373542 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.4247425010840047 0.0 TPKV[YN]GTP 6.7151 - 375 + 1 2.45 50308.9 1.0 283 2612 2896 DOHH2_400M_050219_1,2897 DOHH2_400M_050219_1,2897,PTKGRADLTQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2898 13.149 627.0 100500.0 25 0 10412.0 + 6794 EEANNDLENK 10 98 588.2623416151839 1174.5101302971675 2 588.2635986208916 MULTI CID FTMS 0 0 0 2896 88973.578125 0.9139188596760482 -3 0.0699701309204101 2 Unmodified _EEANNDLENK_ CON__P35527;ENSG00000171403|ENST00000246662|KRT9 35.61225514009592 0.2039006631696762 1 EEANND{I|L}ENK 10 0 + 67.724 0.0 0.0 5.7661 5.7661 83.009 0.0 0.0 0.0 21.24938736608301 5.538922625743865 5.538922625743865 5.538922625743865 0 0.3054621874040891 1.3979400086720375 0.3807196863200844 0.6941909317242506 + + EEANND{I|L}ENK;EEANND{I|L}EKN;EEANGGD{I|L}ENK;EEAGGND{I|L}ENK;EEANND{I|L}EGGK;EEAGGND{I|L}EKN;EEANGGD{I|L}EKN;EEANGGD{I|L}EGGK;EEAGGND{I|L}EGGK;EEAGGGGD{I|L}ENK 5.7661;5.2945;4.9858;4.9858;4.9858;4.5142;4.5142;4.2086;4.2086;4.2086 +;-;-;-;-;-;-;-;-;- + 551 + 1 2.45 50216.2 1.0 284 2612 2896 DOHH2_400M_050219_1,2898 DOHH2_400M_050219_1,2898,EEANNDLENK False True EEANNDLENK 13.148505 588.263598620892 526067.4375 2896.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 7.755629539489746 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 2907 13.193 800.0 150230.0 25 0 17254.0 + 29277 QIEHEVSSS 9 130 508.2382670769656 1014.4619812207312 2 508.2393066287041 MULTI CID FTMS 0 0 0 2906 113390.4765625 0.3760453707080534 -7 0.0282754898071289 1 Unmodified _QIEHEVSSS_ CON__P35527;ENSG00000171403|ENST00000246662|KRT9 96.28474662873226 0.0124266067997264 1 SVQ[NP]SSS 8 6 40.314 0.0 0.0 3.9739 0.0 0.0 210.0837596404562 0.0 210.0837596404562 0.0 27.03943367216696 0.0 0.0 0 0.3494850021680094 0.0 1.4698565171985376 0.3807196863200844 SVQ[NP]SSS 3.9739 - 642 + 1 2.45 97257.1 0.4199999868869781 285 2620 2906 DOHH2_400M_050219_1,2907 DOHH2_400M_050219_1,2907,QIEHEVSSS True True TVHPDSVSSS 13.193163 508.239306628704 1315201.125 2906.0 nc|ENSG00000148396|O15027-2|SEC16A;;nc|ENSG00000148396|O15027-4|SEC16A;;nc|ENSG00000148396|O15027-3|SEC16A;;nc|ENSG00000148396|O15027-5|SEC16A;;ENSG00000148396|ENST00000684901|SEC16A 0.4137943387031555 2.0 False 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 2911 13.218 800.0 102130.0 25 0 3082.9 + 35549 STQMTITTQK 10 117 577.7894876641599 1153.5644223951197 2 577.7902709841728 MULTI CID FTMS 0 0 0 2910 95525.0390625 0.1340237334328309 -18 0.164773941040039 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 81.9152076656658 0.0154982280583276 1 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 67.279 0.0 0.0 5.8323 5.8323 86.559 0.0 0.0 0.0 5.764837301042718 21.72743342870188 5.764837301042718 9.164539485499256 0 0.9049471895720984 0.0 0.5 1.4916440611282624 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}[YV]VP;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}[YV]VP;[AG]TSQ[YV][Q{I|L}]{[MG]|[TS]};AASSQ[YV][Q{I|L}]{[MG]|[TS]} 5.8323;5.0378;5.0378;4.2465;3.9488;3.3521;3.1575;2.2276;2.0048;1.4828 +;-;-;-;-;-;-;-;-;- + 774 + 1 2.45 63144.2 0.4199999868869781 286 2623 2910 DOHH2_400M_050219_1,2911 DOHH2_400M_050219_1,2911,STQMTITTQK True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2913 13.225 287.0 216850.0 25 0 23055.0 + -1 DTFHGSASGM 10 100 513.2030046532102 1024.3914563732203 2 513.2029296755791 MULTI CID FTMS 0 0 0 2912 254255.171875 0.7242269550792593 14 -0.180856704711914 1 Oxidation (M) _DTFHGSASGM(Oxidation (M))_ REV__ENSG00000127415|ENST00000514224|IDUA;REV__ENST00000506561.5_1_4:980866-994923:+|nuORF;REV__ENST00000508168.5_1_4:980866-994923:+|nuORF;REV__ENST00000514698.5_1_4:980866-997838:+|nuORF;REV__nc|ENSG00000127415|P35475-2|IDUA 32.30548876998284 0.2428506522065767 1 {[ES]|[DT]|[{I|L}C]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F} 9 -1 + 44.235 0.0 0.0 4.3182 4.3182 71.141 0.0 0.0 0.0 0.2160728450570559 0.2160728450570559 0.2160728450570559 0.2160728450570559 0 0.7742275032520141 0.0 0.3494850021680094 1.0356668758921828 {[ES]|[DT]|[{I|L}C]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}QTD{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}ET{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WSHSQ{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}[AG]TD{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTD{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}ET{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[ES]|[DT]|[{I|L}C]}[YQ]HSQ{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTD{M(Oxidation (M))|F} 4.3182;4.2971;4.1819;3.9093;3.3982;3.3209;3.171;3.0558;2.9605;2.9228 -;-;-;-;-;-;-;-;-;- 412 + 1 2.45 52800.8 1.0 287 2624 2912 DOHH2_400M_050219_1,2913 DOHH2_400M_050219_1,2913,DTFHGSASGM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2914 13.239 800.0 206900.0 25 0 10501.0 19840 LHKFLMSLL 9 162 367.8893645934991 1100.6462643806974 3 367.8890869021416 MULTI CID FTMS 0 0 0 2912 116275.7578125 0.2544253189834596 -14 0.1194772720336914 2 Unmodified _LHKFLMSLL_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 30.63653989081413 0.1413794767160703 1 KH{I|L} 3 7 30.049 0.0 0.0 2.7302 0.0 0.0 704.3952058776376 0.0 704.3952058776376 0.0 10.585456211725202 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3054621874040891 KH{I|L} 2.7302 - 177 1 2.45 130434.6 0.7799999713897705 288 2624 2912 DOHH2_400M_050219_1,2914 DOHH2_400M_050219_1,2914,LHKFLMSLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2919 13.267 653.0 120570.0 25 0 14061.0 + 13244 HIDTIVHV 8 109 467.26280452832 932.51105612344 2 467.2630798220634 MULTI CID FTMS 0 0 0 2918 80283.5546875 0.1748146925591843 50 -0.5655145645141602 1 Unmodified _HIDTIVHV_ REV__ENSG00000197721|ENST00000508064|CR1L;REV__nc|ENSG00000197721|Q2VPA4-2|CR1L;REV__nc|ENSG00000197721|Q2VPA4-3|CR1L 14.581692164780916 0.6954967302934248 1 KTT[RK]VH 7 -1 28.772 0.0 0.0 3.0854 0.0 0.0 63.99836980273762 0.0 63.99836980273762 0.0 11.113423602439454 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 KTT[RK]VH 3.0854 - 138 + 1 2.45 64451.5 1.0 289 2628 2918 DOHH2_400M_050219_1,2919 DOHH2_400M_050219_1,2919,HIDTIVHV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2920 13.28 800.0 90354.0 25 0 5999.1 + 12879 GVYAALHSV 9 112 458.7459762824272 915.4773996316544 2 458.7456542849541 MULTI CID FTMS 0 0 0 2918 97689.65625 1.0 0 0.0 2 Unmodified _GVYAALHSV_ REV__ENST00000268605.11_1_16:67209235-67209376:+|nuORF 30.22481116460888 0.1466181017706357 1 VGGP[KS]WSV 9 -1 + 87.571 0.0 0.0 9.5656 9.5656 97.801 0.0 0.0 0.0 75.35245682886867 12.98332479720628 12.98332479720628 22.00798586093481 0 1.565463477821985 2.0 0.7302046884880937 0.0 VGGP[KS]WSV;VNP[KS]WSV;VGGP[KS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P;VGGP{[NV]|[RG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;VGGN[TP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P;VGGP[KS][PA]{[CT]|[{M(Oxidation (M))|F}G]};VG[YR][WH]V;VGGP{[NV]|[RG]}{[VA]|[{I|L}G]}{[CT]|[{M(Oxidation (M))|F}G]};VNP[KS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P;VNP{[NV]|[RG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V 9.5656;7.1616;6.1795;5.8693;5.6583;5.3224;4.4803;4.2301;3.7755;3.4653 -;-;-;-;-;-;-;-;-;- 334 + 1 2.45 61069.2 1.0 290 2628 2918 DOHH2_400M_050219_1,2920 DOHH2_400M_050219_1,2920,GVYAALHSV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2921 13.294 800.0 89792.0 25 0 8219.2 + 8197 EPSPSLIQSAN 11 106 571.7878060317585 1141.5610591303168 2 571.7873412966728 MULTI CID FTMS 0 0 0 2918 84777.7890625 0.5132121096896151 -7 0.0581741333007812 3 Unmodified _EPSPSLIQSAN_ REV__ENSG00000156509|ENST00000428847|FBXO43;REV__ENST00000520987.1_1_8:101149771-101157363:-|nuORF 45.739877483867886 0.1412225664835785 1 DPSQSAN 7 -1 71.362 0.0 0.0 6.2513 0.0 0.0 424.26915175605626 0.0 424.26915175605626 0.0 50.28019205609368 0.0 0.0 0 1.3807196863200843 0.0 1.8494850021680087 0.0 DPSQSAN 6.2513 - 133 1 2.45 59794.9 0.4099999964237213 291 2628 2918 DOHH2_400M_050219_1,2921 DOHH2_400M_050219_1,2921,EPSPSLIQSAN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2924 13.315 800.0 87666.0 25 0 9433.7 -1 0 75 927.4069416037028 3705.598660548411 4 927.908740222454 MULTI CID FTMS 0 0 0 2923 157080.03125 0.348383372448737 -5 0.059000015258789 1 1 {I|L}SPA[YN][HS]AS{[QD]|[EN]|[WG]|[KD]|[RS]} 12 -1 21.577 0.0 0.0 0.58228 0.0 0.0 2417.026103030636 0.0 2417.026103030636 0.0 10.607887415777526 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}SPA[YN][HS]AS{[QD]|[EN]|[WG]|[KD]|[RS]} 0.58228 - 284 + 1 2.45 53133.0 0.5199999809265137 292 2630 2923 DOHH2_400M_050219_1,2924 DOHH2_400M_050219_1,2924, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2925 13.328 749.0 105430.0 25 0 51675.0 + -1 DCQTFFKRWEV 11 52 505.9070319744598 0 505.9071533083916 PEAK CID FTMS 0 0 0 2923 140766.453125 0.1117197508246305 140 -1.730266571044922 2 Carbamidomethyl (C) _DC(Carbamidomethyl (C))QTFFKRWEV_ REV__ENSG00000166266|ENST00000393094|CUL5 0.0948413911109767 0.4761840153648598 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.45 67844.6 1.0 293 2630 2923 DOHH2_400M_050219_1,2925 DOHH2_400M_050219_1,2925,DCQTFFKRWEV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2928 13.348 800.0 56913.0 25 0 14959.0 -1 0 36 1152.4422065672584 3454.304790301975 3 1153.110156238079 MULTI CID FTMS 0 0 0 2927 61483.24609375 0.1648367738283157 -10 0.1345176696777343 1 1 E 1 -1 6.9897 0.0 0.0 0.20235 0.0 0.0 2798.0774911830385 524.1590059869749 3322.236497170013 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20235 - 12 + 1 2.45 45218.4 0.3300000131130218 294 2632 2927 DOHH2_400M_050219_1,2928 DOHH2_400M_050219_1,2928, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2932 13.364 296.0 169380.0 25 0 28365.0 + -1 ISGGGSRGGGGGGY 14 78 569.7659460671916 1137.5173392011832 2 569.7664672732353 MULTI CID FTMS 0 0 0 2931 146407.375 0.6551023692710269 -4 0.0285863876342773 1 Oxidation (M) _LSLFYWM(Oxidation (M))Y_ P04264;ENSG00000167768|ENST00000252244|KRT1 26.34127834903884 0.4900704351052977 1 {I|L}SGGG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DV]GGY 12 -1 + 80.461 0.0 0.0 7.0733 7.0733 80.806 0.0 0.0 0.0 54.26267834909439 8.494850021680094 8.494850021680094 0.591214521186572 0 1.1861818737241734 2.0 0.3807196863200844 0.0 {I|L}SGGG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DV]GGY;{I|L}SGEE{I|L}[DV]GGY;{I|L}SGGG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EAAGY;{I|L}SGEE{I|L}EAAGY;{I|L}SGN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DV]GGY;{I|L}SGG[WQ][DV]GGY;{I|L}SGG[WQ]EAAGY;{I|L}SNG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DV]GGY;{I|L}SGGG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RD]GY;{I|L}SGN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EAAGY 7.0733;7.0214;6.8087;6.7567;6.7567;6.7567;6.4921;6.4921;6.4921;6.4921 -;-;-;-;-;-;-;-;-;- 579 + 1 2.45 41701.1 1.0 295 2635 2931 DOHH2_400M_050219_1,2932 DOHH2_400M_050219_1,2932,LSLFYWMY False False ISGGGSRGGGGGGY 13.364243 569.766467273235 1035400.6875 2931.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 4.405609051386516 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 2935 13.385 800.0 94746.0 25 0 14708.0 13306 HKIYEKKR 8 76 551.3300871418326 1100.645621350465 2 551.3295776247978 MULTI CID FTMS 0 0 0 2934 75255.15625 0.7798543864208416 1 -0.0302248001098632 1 Unmodified _HKIYEKKR_ ENSG00000142149|ENST00000270112|HUNK 14.838274106304384 0.6917062315640577 1 HK{I|L} 3 5 28.898 0.0 0.0 2.6255 0.0 0.0 0.0 719.3856295221311 719.3856295221311 7.928479137076565 0.0 0.0 0.0 0 0.7215141619232908 0.0 0.0 0.0 + HK{I|L} 2.6255 + + 37 + 1 2.45 65493.1 0.4600000083446502 296 2637 2934 DOHH2_400M_050219_1,2935 DOHH2_400M_050219_1,2935,HKIYEKKR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2936 13.399 800.0 129400.0 25 0 7491.6 + 9382 FIREKGKSV 9 110 532.3156305942682 1062.6167082553363 2 532.3165161013603 MULTI CID FTMS 0 0 0 2934 95810.9296875 0.9439385666338108 -1 0.0040578842163085 2 Unmodified _FIREKGKSV_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;ENST00000538136.1_1_2:48011218-48025765:+|nuORF;nc|ENSG00000116062|P52701-2|MSH6 29.84058131909904 0.1515068451768857 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REKGKSV 9 0 + 34.412 0.0 0.0 3.2384 3.2384 76.824 0.0 0.0 0.0 2.019860517667915 4.830086750092015 2.019860517667915 8.266062568876716 0 0.5709991640913001 0.0 0.3252574989159953 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REKGKSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RD[KA]KSV;{[CT]|[{M(Oxidation (M))|F}G]}KGKE[{I|L}V]SV;{[CT]|[{M(Oxidation (M))|F}G]}K[KA]D[{I|L}V]SV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R[WK]KW;{[CT]|[{M(Oxidation (M))|F}G]}K[WK]RNK;{[CT]|[{M(Oxidation (M))|F}G]}K[WK][{I|L}V]SV;{[CT]|[{M(Oxidation (M))|F}G]}K[WK]RGGK 3.2384;2.4606;2.3653;1.5874;1.5135;1.1478;0.92704;0.27621 +;-;-;-;-;-;-;- + 318 1 2.45 86085.5 0.449999988079071 297 2637 2934 DOHH2_400M_050219_1,2936 DOHH2_400M_050219_1,2936,FIREKGKSV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2939 13.407 58.0 1335700.0 25 0 305730.0 + 9383 FIREKGKSV 9 82 355.21353300392366 1062.618769611971 3 355.2131225466728 MULTI CID FTMS 0 0 0 2938 378943.1875 0.7680779533582384 1 -0.0327939987182617 1 Unmodified _FIREKGKSV_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;ENST00000538136.1_1_2:48011218-48025765:+|nuORF;nc|ENSG00000116062|P52701-2|MSH6 21.53697664764585 0.2571576504437394 1 KGE 3 7 29.085 0.0 0.0 2.7371 0.0 0.0 730.4185658185562 0.0 730.4185658185562 0.0 17.095442439488107 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 KGE 2.7371 - 23 1 2.45 70903.5 1.0 298 2639 2938 DOHH2_400M_050219_1,2939 DOHH2_400M_050219_1,2939,FIREKGKSV False True FIREKGKSV 13.407201 355.213122546673 3878057.25 2938.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENST00000538136.1_1_2:48011218-48025765:+|nuORF;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-2|MSH6 3.5291234652201333 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2940 13.421 800.0 135740.0 25 0 8009.3 28365 PSHFRYEK 8 125 532.267447417267 1062.520341901334 2 533.2704345583916 MULTI CID FTMS 0 0 0 2938 122423.2890625 0.0929945658567683 -25 0.2498188018798828 2 Unmodified _PSHFRYEK_ ENSG00000064601|ENST00000646241|CTSA;ENST00000480961.1_1_20:44522693-44523773:+|nuORF;nc|ENSG00000064601|P10619-2|CTSA 23.1484247019978 0.5573009939494978 1 [VS]AG{[CP]|[EA]}VHQ 9 8 44.922 0.0 0.0 4.2279 0.0 0.0 0.0 181.07329111592165 181.07329111592165 23.30050788817003 0.0 0.0 0.0 0 0.0 2.0 0.899649864804614 0.5 [VS]AG{[CP]|[EA]}VHQ 4.2279 - 1657 1 2.45 87858.1 0.4900000095367431 299 2639 2938 DOHH2_400M_050219_1,2940 DOHH2_400M_050219_1,2940,PSHFRYEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2941 13.435 800.0 12906.0 25 0 958.28 -1 0 33 1002.183725482984 4004.705796065536 4 1002.68516844511 MULTI CID FTMS 0 0 0 2938 59600.88671875 0.6977651597121981 4 -0.0724105834960937 3 1 G 1 -1 5.4846 0.0 0.0 0.13695 0.0 0.0 3151.655760520417 793.0084932916624 3944.66425381208 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.13695 - 3 + 1 2.45 15130.6 0.3300000131130218 300 2639 2938 DOHH2_400M_050219_1,2941 DOHH2_400M_050219_1,2941, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2944 13.456 800.0 42563.0 25 0 2284.1 -1 0 69 678.2953328705747 2709.1522256158987 4 678.5456420779228 MULTI CID FTMS 0 0 0 2943 110703.46875 0.8903501113436849 -8 0.0912094116210937 1 1 [HD]Y 3 -1 25.942 0.0 0.0 0.95757 0.0 0.0 0.0 2290.9829500634173 2290.9829500634173 17.870156338638594 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [HD]Y 0.95757 - 276 1 2.45 32127.2 0.4099999964237213 301 2641 2943 DOHH2_400M_050219_1,2944 DOHH2_400M_050219_1,2944, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2946 13.461 76.0 450830.0 25 0 26889.0 + 35550 STQMTITTQK 10 69 577.7894876641599 1153.5644223951197 2 577.7898437380791 MULTI CID FTMS 0 0 0 2945 695243.5 0.9754419409757404 1 -0.0190610885620117 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 61.08992128646608 0.0337271188422265 1 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 68.368 0.0 0.0 5.9267 5.9267 86.588 0.0 0.0 0.0 5.764837301042711 16.641755529644534 5.764837301042711 9.16453948549924 0 0.6989700043360187 0.0 0.5 0.9545391030138068 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA 5.9267;5.1322;5.1322;4.484;4.3409;3.6927 +;-;-;-;-;- + 178 + 1 2.45 32491.4 1.0 302 2642 2945 DOHH2_400M_050219_1,2946 DOHH2_400M_050219_1,2946,STQMTITTQK True False STQMTITTQK 13.460551 577.789843738079 9372820.0 2945.0 ENSG00000181143|ENST00000397910|MUC16 10.09327189127604 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2947 13.475 800.0 40389.0 25 0 2733.9 -1 0 50 904.0583243179422 2709.1531435540264 3 904.3938476443292 MULTI CID FTMS 0 0 0 2945 91359.7265625 1.0 0 0.0 2 1 [HD]Y 3 -1 31.695 0.0 0.0 1.1699 0.0 0.0 0.0 2290.9812740074044 2290.9812740074044 22.715299873086607 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 [HD]Y 1.1699 - 53 1 2.45 30982.7 0.4099999964237213 303 2642 2945 DOHH2_400M_050219_1,2947 DOHH2_400M_050219_1,2947, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2949 13.481 196.0 434910.0 25 0 29346.0 19841 LHKFLMSLL 9 95 367.8893645934991 1100.6462643806974 3 367.8890258669853 MULTI CID FTMS 0 0 0 2948 300482.15625 0.657491035887494 5 -0.0348434448242187 1 Unmodified _LHKFLMSLL_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 24.020572477871973 0.2255576514309169 1 KH{I|L} 3 7 23.984 0.0 0.0 2.1791 0.0 0.0 704.3962504928843 0.0 704.3962504928843 0.0 9.827796776480469 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 KH{I|L} 2.1791 - 39 1 2.45 72927.8 1.0 304 2643 2948 DOHH2_400M_050219_1,2949 DOHH2_400M_050219_1,2949,LHKFLMSLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2953 13.506 800.0 125360.0 25 0 12257.0 + 17578 KPTAAFHLL 9 114 499.2929706148208 996.5713882964416 2 499.2924987673759 MULTI CID FTMS 0 0 0 2952 76062.3359375 0.3097700264399596 -9 0.1209363937377929 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 30.22481116460888 0.1466181017706357 1 KPTQ 4 -1 45.015 0.0 0.0 4.517 0.0 0.0 0.0 539.2819307916624 539.2819307916624 18.312680466710773 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 KPTQ 4.517 - 285 + 1 2.45 79556.2 0.449999988079071 305 2646 2952 DOHH2_400M_050219_1,2953 DOHH2_400M_050219_1,2953,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2956 13.515 113.0 603280.0 25 0 112090.0 + 31949 RVDPNGSRY 9 77 532.267447417267 1062.520341901334 2 532.2679931521416 MULTI CID FTMS 0 0 0 2955 402892.9375 0.0536583564233235 -17 0.1819801330566406 1 Unmodified _RVDPNGSRY_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 21.53697664764585 0.2571576504437394 1 [RV]D 3 6 18.429 0.0 0.0 1.7344 0.0 0.0 0.0 689.3017322562545 689.3017322562545 6.438937347570079 0.0 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.4247425010840047 + [RV]D 1.7344 + + 49 1 2.45 58303.8 1.0 306 2648 2955 DOHH2_400M_050219_1,2956 DOHH2_400M_050219_1,2956,RVDPNGSRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2957 13.528 759.0 144910.0 25 0 21987.0 + 15685 IQRLETMK 8 95 509.7893135466428 1017.5640741600856 2 509.7898132205009 MULTI CID FTMS 0 0 0 2955 104462.75 0.1311942098232626 -20 0.2583284378051758 2 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 29.081581746732265 0.4323690340403521 1 TMK 3 -1 47.193 0.0 0.0 4.6378 0.0 0.0 639.3702624841262 0.0 639.3702624841262 0.0 25.510299956639813 0.0 0.0 0 1.424742501084005 0.0 0.3252574989159953 0.3494850021680094 TMK 4.6378 + + 329 + 1 2.45 87517.0 1.0 307 2648 2955 DOHH2_400M_050219_1,2957 DOHH2_400M_050219_1,2957,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2960 13.548 800.0 90211.0 25 0 3752.0 + -1 NEQSMRRQM 9 105 598.2704256246774 1194.526298316155 2 598.2708618044853 MULTI CID FTMS 0 0 0 2959 95935.265625 0.4848191992874413 -11 0.1293783187866211 1 Oxidation (M) _NEQSM(Oxidation (M))RRQM_ REV__ENSG00000143669|ENST00000389793|LYST 36.12702656103203 0.0967173616627612 1 {[QD]|[EN]|[WG]|[KD]|[RS]}HEAQ 6 -1 49.434 0.0 0.0 4.1383 0.0 0.0 0.0 483.2217672176084 483.2217672176084 11.295608414694655 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.4916440611282626 1.9361818737241727 {[QD]|[EN]|[WG]|[KD]|[RS]}HEAQ 4.1383 - 1104 1 2.45 58983.2 0.449999988079071 308 2650 2959 DOHH2_400M_050219_1,2960 DOHH2_400M_050219_1,2960,NEQSMRRQM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2964 13.573 800.0 15277.0 25 0 1627.2 -1 0 31 927.4069416037028 3705.598660548411 4 927.9091674685478 MULTI CID FTMS 0 0 0 2963 36659.38671875 0.0813058201946376 18 -0.1878023147583007 1 1 AT 2 -1 15.261 0.0 0.0 0.41183 0.0 0.0 2696.1926935238625 834.2975557916624 3530.490249315525 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 AT 0.41183 - 8 + 1 2.45 19174.5 0.3799999952316284 309 2653 2963 DOHH2_400M_050219_1,2964 DOHH2_400M_050219_1,2964, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2969 13.602 800.0 32633.0 25 0 10463.0 -1 0 20 1152.4422065672584 3454.304790301975 3 1152.777880847454 MULTI CID FTMS 0 0 0 2968 54202.44140625 0.1378516493289572 16 -0.2117986679077148 1 1 G 1 -1 6.9897 0.0 0.0 0.20235 0.0 0.0 2147.750665401388 1246.5077608697875 3394.258426271176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20235 - 1 + 1 2.45 32274.2 0.3700000047683716 310 2657 2968 DOHH2_400M_050219_1,2969 DOHH2_400M_050219_1,2969, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 2974 13.629 705.0 101790.0 25 0 41195.0 -1 VEWRKFFTQCD 11 53 505.9068358565923 0 505.9069702029228 PEAK CID FTMS 0 0 0 2973 78918.5234375 0.7958413906307795 -1 0.0040655136108398 1 Carbamidomethyl (C) _VEWRKFFTQC(Carbamidomethyl (C))D_ ENSG00000166266|ENST00000393094|CUL5 0.4082653385326392 0.4761840153648598 1 V 1 -1 1.9897 0.0 0.0 0.19704 0.0 0.0 504.5671679516627 403.1375216119751 907.7046895636378 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.19704 + + 1 + 1 2.45 64927.8 1.0 311 2661 2973 DOHH2_400M_050219_1,2974 DOHH2_400M_050219_1,2974,VEWRKFFTQCD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2975 13.643 800.0 63661.0 25 0 6367.0 + 37951 GSDHQSPSSSSY 12 96 619.7495489545918 1237.4845449759837 2 619.7479736208916 MULTI CID FTMS 0 0 0 2973 82324.890625 0.8739376301824701 -5 0.0338134765625 2 Unmodified _TMFICCSPSSY_ ENSG00000169155|ENST00000373464|ZBTB43 29.081581746732265 0.4093582134107448 1 QS[PS]SSSY 8 7 57.846 0.0 0.0 4.6745 0.0 0.0 396.1393604962906 0.0 396.1393604962906 0.0 9.168701871565672 0.0 0.0 0 0.7887254899964358 0.0 2.1989700043360187 0.0 QS[PS]SSSY 4.6745 - 315 1 2.45 41513.8 0.4000000059604645 312 2661 2973 DOHH2_400M_050219_1,2975 DOHH2_400M_050219_1,2975,TMFICCSPSSY False False GSDHQSPSSSSY 13.643089 619.747973620892 464022.28125 2973.0 ENSG00000169155|ENST00000373464|ZBTB43 8.104878266652426 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 2978 13.654 251.0 220470.0 25 0 12156.0 + 19424 LEVHFIYFI 9 87 394.21953086602826 1179.6367631982848 3 394.2199890017509 MULTI CID FTMS 0 0 0 2977 114935.1953125 0.1689522960654824 -8 0.0703773498535156 1 Unmodified _LEVHFIYFI_ REV__ENSG00000156875|ENST00000370152|MFSD14A 10.823927491677226 0.5436922275383211 1 {M(Oxidation (M))|F}{I|L} 2 -1 24.776 0.0 0.0 2.1003 0.0 0.0 901.4875613355056 0.0 901.4875613355056 0.0 12.302046884880935 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L} 2.1003 + + 35 1 2.45 49859.7 1.0 313 2663 2977 DOHH2_400M_050219_1,2978 DOHH2_400M_050219_1,2978,LEVHFIYFI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2979 13.664 562.0 93228.0 25 0 8868.7 + 45428 YTDHQNSSSY 10 91 601.2414564077405 1200.468359882281 2 601.2412597537041 MULTI CID FTMS 0 0 0 2977 113663.765625 0.3328055491861763 -8 0.0703773498535156 2 Unmodified _YTDHQNSSSY_ ENSG00000125398|ENST00000245479|SOX9 57.72198328787511 0.0425618229276495 1 [YT][HD]QNSSSY 10 0 + 52.145 0.0 0.0 4.3437 4.3437 79.682 0.0 0.0 0.0 2.0580942886632414 22.23074980804633 2.0580942886632414 7.513035283853213 0 0.8182503180159344 1.154901959985743 0.9247425010840048 0.7302046884880937 + + [YT][HD]QNSSSY;[HM]SYM[WP]SY;[QA]SS[{M(Oxidation (M))|F}E][WP]SY;[YT][HD][AG]NSSSY;[YT][HD]QGGSSSY;{[{M(Oxidation (M))|F}C]|[YS]}{[YC]|[HE]}QNSSSY;[HM]SSNQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[CT]|[{M(Oxidation (M))|F}G]};{[CA]|SS}[EP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NSSSY;{[{M(Oxidation (M))|F}C]|[YS]}{[YC]|[HE]}[AG]NSSSY;{[{M(Oxidation (M))|F}C]|[YS]}{[YC]|[HE]}QGGSSSY 4.3437;3.7178;3.6027;3.5803;3.5803;3.4857;3.2206;3.0585;2.7223;2.7223 +;-;-;-;-;-;-;-;-;- + 538 1 2.45 43198.8 1.0 314 2663 2977 DOHH2_400M_050219_1,2979 DOHH2_400M_050219_1,2979,YTDHQNSSSY True True YTDHQNSSSY 13.66406 601.241259753704 1377977.625 2977.0 ENSG00000125398|ENST00000245479|SOX9 7.383531093597412 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2980 13.678 800.0 113560.0 25 0 19921.0 + 23952 LVRPAVYEK 9 103 537.8202408660097 1073.6259287988194 2 537.8206054568291 MULTI CID FTMS 0 0 0 2977 133726.625 1.0 0 0.0 3 Unmodified _LVRPAVYEK_ REV__ENSG00000133704|ENST00000256079|IPO8;REV__nc|ENSG00000133704|O15397-2|IPO8 10.823927491677226 0.5436922275383211 1 KMT[{I|L}P][WP]K 8 -1 28.193 0.0 0.0 2.6259 0.0 0.0 74.07766733710044 0.0 74.07766733710044 0.0 13.51342204748164 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3054621874040891 KMT[{I|L}P][WP]K 2.6259 - 100 + 1 2.45 76172.0 0.5299999713897705 315 2663 2977 DOHH2_400M_050219_1,2980 DOHH2_400M_050219_1,2980,LVRPAVYEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2983 13.698 800.0 122850.0 25 0 7237.8 + 26397 NTDPHSQEY 9 120 545.7253241663802 1089.4360953995604 2 545.7259399294853 MULTI CID FTMS 0 0 0 2982 79415.6640625 0.0211872070951138 -22 0.2071437835693359 1 Unmodified _NTDPHSQEY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 110.6747026088012 0.0053351249510064 1 {[QS]|[NT]}EHPDTNY 9 6 + 62.927 0.0 0.0 5.7761 5.7761 81.671 0.0 0.0 0.0 8.671655544786965 9.474862165266778 8.671655544786965 3.979400086720375 0 0.75 1.3979400086720375 0.7396518287104438 0.8979400086720376 {[QS]|[NT]}EHPDTNY;{[QS]|[NT]}EHPDNTY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQEDTNY;{[QS]|[NT]}EHPDTGGY;{[QS]|[NT]}DPT[HN]EY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQEDNTY;{[QS]|[NT]}EHPDGGTY;[HS]PQEDTNY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQDETNY;[HS]PQEDNTY 5.7761;5.4109;4.9801;4.9309;4.9064;4.6149;4.5656;4.5422;4.469;4.1769 -;-;-;-;-;-;-;-;-;- 2088 1 2.45 79050.5 0.449999988079071 316 2665 2982 DOHH2_400M_050219_1,2983 DOHH2_400M_050219_1,2983,NTDPHSQEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2987 13.723 800.0 137010.0 25 0 39111.0 + 31747 RRYQKSTEL 9 81 590.825250724916 1179.635948516632 2 590.8253051638603 MULTI CID FTMS 0 0 0 2986 96439.359375 0.6817586249860823 -2 0.0079507827758789 1 Unmodified _RRYQKSTEL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 24.020572477871973 0.2255576514309169 1 K 1 8 4.6041 0.0 0.0 0.3903 0.0 0.0 465.24259021760696 583.2735689752561 1048.5161591928631 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.3903 + + 21 + 1 2.45 86986.1 0.4199999868869781 317 2668 2986 DOHH2_400M_050219_1,2987 DOHH2_400M_050219_1,2987,RRYQKSTEL False True RRYQKSTEL 13.722697 590.82530516386 488638.65625 2986.0 ENSG00000275379|ENST00000616365|H3C11;;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000163041|ENST00000366815|H3-3A;;ENSG00000197153|ENST00000359303|H3C12;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000188375|ENST00000340398|H3-5 -0.0367317001024882 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2988 13.736 769.0 114880.0 25 0 30576.0 -1 SAMELLFLDTF 11 76 434.8821868089726 0 434.8822509646416 PEAK CID FTMS 0 0 0 2986 86132.0859375 0.5495573297060748 33 -0.3108205795288086 2 Oxidation (M) _SAM(Oxidation (M))ELLFLDTF_ ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA 7.0370850670814 0.4761840153648598 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.45 74150.2 1.0 318 2668 2986 DOHH2_400M_050219_1,2988 DOHH2_400M_050219_1,2988,SAMELLFLDTF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2992 13.756 571.0 157280.0 25 0 17159.0 + 17579 KPTAAFHLL 9 109 499.2929706148208 996.5713882964416 2 499.2933532595634 MULTI CID FTMS 0 0 0 2991 130612.96875 0.5319318988090882 16 -0.1627435684204101 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 1 KPT 3 -1 38.94 0.0 0.0 3.9074 0.0 0.0 0.0 667.3508498974095 667.3508498974095 24.23516269895728 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 KPT 3.9074 + + 110 + 1 2.45 73804.7 1.0 319 2671 2991 DOHH2_400M_050219_1,2992 DOHH2_400M_050219_1,2992,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2993 13.77 800.0 111620.0 25 0 21726.0 + 8837 EYVAITKT 8 113 462.7543000372246 923.4940471412492 2 462.7538329958916 MULTI CID FTMS 0 0 0 2991 87522.7109375 1.0 0 0.0 2 Unmodified _EYVAITKT_ REV__ENSG00000108018|ENST00000263054|SORCS1;REV__ENST00000478809.2_1_10:108360440-108378027:-|nuORF;REV__nc|ENSG00000108018|Q8WY21-2|SORCS1;REV__nc|ENSG00000108018|Q8WY21-3|SORCS1;REV__nc|ENSG00000108018|Q8WY21-4|SORCS1 4.75600775471527 0.7954636275367004 1 CK 2 -1 20.969 0.0 0.0 2.2706 0.0 0.0 0.0 689.3468683367023 689.3468683367023 10.48455006504028 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 CK 2.2706 - 40 + 1 2.45 73392.7 0.4199999868869781 320 2671 2991 DOHH2_400M_050219_1,2993 DOHH2_400M_050219_1,2993,EYVAITKT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2995 13.775 17.0 3160700.0 25 0 760180.0 25805 NKQNRQEF 8 50 532.267447417267 1062.520341901334 2 532.2678710818291 MULTI CID FTMS 0 0 0 2994 2929846.75 0.3902048076412757 7 -0.0506095886230468 1 Unmodified _NKQNRQEF_ ENSG00000148634|ENST00000373700|HERC4;ENST00000427635.6_1_10:69682690-69747802:-|nuORF;nc|ENSG00000148634|Q5GLZ8-3|HERC4;nc|ENSG00000148634|Q5GLZ8-6|HERC4;nc|ENSG00000148634|Q5GLZ8|HERC4 13.50788311687929 0.7113601687236069 1 Y 1 8 11.99 0.0 0.0 1.1284 0.0 0.0 370.19602684966713 526.2375582330686 896.4335850827358 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 Y 1.1284 - 6 + 1 2.45 49014.5 1.0 321 2672 2994 DOHH2_400M_050219_1,2995 DOHH2_400M_050219_1,2995,NKQNRQEF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2996 13.777 114.0 528750.0 25 0 76512.0 + 15686 IQRLETMK 8 69 509.7893135466428 1017.5640741600856 2 509.7894775271416 MULTI CID FTMS 0 0 0 2994 517986.28125 0.6505362042247982 4 -0.0384073257446289 2 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 1 TMK 3 -1 43.94 0.0 0.0 4.3182 0.0 0.0 639.3699346110607 0.0 639.3699346110607 0.0 13.04953742795611 0.0 0.0 0 1.424742501084005 0.0 0.0 0.3494850021680094 TMK 4.3182 + + 72 + 1 2.45 52516.0 1.0 322 2672 2994 DOHH2_400M_050219_1,2996 DOHH2_400M_050219_1,2996,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 2997 13.783 285.0 299220.0 25 0 40722.0 + 43769 YEKNPDSHGY 10 111 403.84418264892025 1208.5107185469608 3 403.8438293337822 MULTI CID FTMS 0 0 0 2994 199777.96875 0.2702596615294081 -12 0.1598997116088867 3 Unmodified _YEKNPDSHGY_ ENSG00000147123|ENST00000377811|NDUFB11;nc|ENSG00000147123|Q9NX14-2|NDUFB11 51.629811660486645 0.0705852162080619 1 [YE]KNPDSHGY 10 0 + 73.599 0.0 0.0 6.09 6.09 90.364 0.0 0.0 0.0 58.83579457515807 11.727211861188849 11.727211861188849 12.659389507179348 0 0.805462187404089 1.5228787452803376 0.4247425010840047 0.3494850021680094 + + [YE]KNPDSHGY;[YE]KGGPDSHGY;[VS][{M(Oxidation (M))|F}E]DPNK[C(Carbamidomethyl (C))N];[VS]AQ{[C(Carbamidomethyl (C))E]|[WC]}NK[C(Carbamidomethyl (C))N];[VS][{M(Oxidation (M))|F}E]DPGGK[C(Carbamidomethyl (C))N];[YE]KYYSHGY;[YE]KNP{[CA]|SS}{[C(Carbamidomethyl (C))G]|[NC]}[PA];{[QN]|[E{I|L}]|[KN]}ECCPNKHH;{[HG]|PP}[HM]DPNK[C(Carbamidomethyl (C))N];[VS]A[AG]{[C(Carbamidomethyl (C))E]|[WC]}NK[C(Carbamidomethyl (C))N] 6.09;5.0425;4.4094;3.6387;3.3619;3.2914;3.0727;2.9743;2.9344;2.8804 +;-;-;-;-;-;-;-;-;- + 555 + 1 2.45 68474.4 1.0 323 2672 2994 DOHH2_400M_050219_1,2997 DOHH2_400M_050219_1,2997,YEKNPDSHGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 2998 13.797 800.0 112960.0 25 0 8668.3 + 43771 YEKNPDSHGY 10 118 605.2621848670764 1208.5098168009526 2 605.2623779177666 MULTI CID FTMS 0 0 0 2994 85483.0390625 0.2103938614641488 -13 0.1637916564941406 4 Unmodified _YEKNPDSHGY_ ENSG00000147123|ENST00000377811|NDUFB11;nc|ENSG00000147123|Q9NX14-2|NDUFB11 75.5705956163825 0.0187571863157879 1 YEKNPDSHGY 10 0 + 102.66 0.0 0.0 8.495 8.495 95.433 0.0 0.0 0.0 89.36558273558376 7.99299729609227 7.99299729609227 12.971736348700103 0 1.9731975075880328 2.0 0.75 0.3807196863200844 + + YEKNPDSHGY;YEKGGPDSHGY;YEKNS[DP]HGY;YEKNS{[YD]|[{M(Oxidation (M))|F}M]}QY;YEKYYSHGY;YEKNS{[YD]|[{M(Oxidation (M))|F}M]}AGY;YEKNS[WY]GY;YEKGGS{[YD]|[{M(Oxidation (M))|F}M]}QY;YEKGGS[DP]HGY;YEKGGS{[YD]|[{M(Oxidation (M))|F}M]}AGY 8.495;7.4216;6.9033;6.6673;6.319;6.1571;6.0114;5.9054;5.83;5.0837 +;-;-;-;-;-;-;-;-;- + 1256 + 1 2.45 70341.3 0.4199999868869781 324 2672 2994 DOHH2_400M_050219_1,2998 DOHH2_400M_050219_1,2998,YEKNPDSHGY True True YEKNPDSHGY 13.79653 605.262377917767 8743323.375 2994.0 nc|ENSG00000147123|Q9NX14-2|NDUFB11;;ENSG00000147123|ENST00000377811|NDUFB11 9.93850580851237 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3007 13.841 800.0 113180.0 25 0 10647.0 + 13814 HTKPRPAL 8 129 460.2772141392207 918.5398753452414 2 460.2775146365166 MULTI CID FTMS 0 0 0 3006 68726.78125 0.8034051043870784 1 -0.0163536071777343 1 Unmodified _HTKPRPAL_ ENSG00000099991|ENST00000263119|CABIN1;ENST00000485008.1_1_22:24563230-24569157:+|nuORF;nc|ENSG00000099991|Q9Y6J0-2|CABIN1 20.453626601364224 0.6087503291685402 1 HTK 3 5 44.76 0.0 0.0 4.873 0.0 0.0 0.0 549.3149520524098 549.3149520524098 31.17688622781786 0.0 0.0 0.0 0 0.634400500525261 1.2218487496163564 0.0 0.0 + HTK 4.873 + + 99 + 1 2.45 71918.7 0.8899999856948853 325 2680 3006 DOHH2_400M_050219_1,3007 DOHH2_400M_050219_1,3007,HTKPRPAL False True HTKPRPAL 13.841342 460.277514636517 505388.75 3006.0 ENST00000485008.1_1_22:24563230-24569157:+|nuORF;;ENSG00000099991|ENST00000263119|CABIN1;;nc|ENSG00000099991|Q9Y6J0-2|CABIN1 1.0799952348073325 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3010 13.862 800.0 183100.0 25 0 17602.0 + 40760 VLKEKRSL 8 99 486.81374250579 971.61293207838 2 486.8137695193291 MULTI CID FTMS 0 0 0 3009 132176.0 0.3548040623314953 -9 0.0488796234130859 1 Unmodified _VLKEKRSL_ ENSG00000137814|ENST00000260372|HAUS2;nc|ENSG00000137814|Q9NVX0-2|HAUS2;nc|ENSG00000137814|Q9NVX0-3|HAUS2 39.94969957227396 0.2351327405675156 1 V{I|L}KEK 5 3 74.24 0.0 0.0 7.6409 0.0 0.0 0.0 371.2044466608032 371.2044466608032 51.88924619253882 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.3807196863200844 0.7742275032520141 + V{I|L}KEK 7.6409 + + 207 + 1 2.45 116445.9 0.4799999892711639 326 2682 3009 DOHH2_400M_050219_1,3010 DOHH2_400M_050219_1,3010,VLKEKRSL False True VLKEKRSL 13.861763 486.813769519329 1373578.25 3009.0 ENSG00000137814|ENST00000260372|HAUS2;;nc|ENSG00000137814|Q9NVX0-2|HAUS2;;nc|ENSG00000137814|Q9NVX0-3|HAUS2 1.2440168062845869 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3013 13.882 800.0 102700.0 25 0 16945.0 + -1 YSDRSSGGSY 10 99 539.7253512867336 1077.436149640267 2 539.7254516482353 MULTI CID FTMS 0 0 0 3012 118377.6015625 0.4376649872932055 -7 0.0528621673583984 1 Oxidation (M) _SYSPSM(Oxidation (M))LDY_ ENST00000591097.5_1_19:1271671-1272439:+|nuORF;ENSG00000099622|ENST00000587896|CIRBP;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;ENST00000591055.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENST00000593128.5_1_19:1271297-1272439:+|nuORF 42.09456458481378 0.0639583784996157 1 D[PS]SSSGGSY 10 -1 55.187 0.0 0.0 5.1221 0.0 0.0 135.0684986798844 0.0 135.0684986798844 0.0 43.48812445174566 0.0 0.0 0 1.305462187404089 0.0 0.6549471895720984 0.0 D[PS]SSSGGSY 5.1221 - 1305 1 2.45 67626.7 0.4300000071525574 327 2684 3012 DOHH2_400M_050219_1,3013 DOHH2_400M_050219_1,3013,SYSPSMLDY False False YSDRSSGGSY 13.882023 539.725451648235 1223129.625 3012.0 ENST00000591097.5_1_19:1271671-1272439:+|nuORF;;ENSG00000099622|ENST00000587896|CIRBP;;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;;ENST00000591055.5_1_19:1271297-1272439:+|nuORF;;nc|ENSG00000099622|Q14011-3|CIRBP;;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;;nc|ENSG00000099622|Q14011|CIRBP;;nc|ENSG00000099622|Q14011-2|CIRBP;;ENST00000593128.5_1_19:1271297-1272439:+|nuORF 9.015634218851725 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3016 13.901 721.0 102590.0 25 0 9266.6 + 32833 SEGNGSHTI 9 122 451.2047678597644 900.3949827863288 2 451.2042419314384 MULTI CID FTMS 0 0 0 3015 77667.671875 0.7604132031458731 -8 0.0692310333251953 1 Unmodified _SEGNGSHTI_ ENSG00000197157|ENST00000354725|SND1 37.97399986684836 0.0865783450051559 1 {[MG]|[TS]}[YV]C{I|L}{[ES]|[DT]|[{I|L}C]} 8 7 + 20.15 0.0 0.0 2.2379 2.2379 70.355 0.0 0.0 0.0 3.1829554760228973 3.895840698002996 3.1829554760228973 3.1829554760228973 0 0.3252574989159953 0.0 0.3252574989159953 0.0 {[MG]|[TS]}[YV]C{I|L}{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}[WE]H[{I|L}T];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}C[{M(Oxidation (M))|F}E]R;{[ES]|[DT]|[{I|L}C]}GN[SG]H[{I|L}T];{[ES]|[DT]|[{I|L}C]}[WE][{I|L}T]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}C[{M(Oxidation (M))|F}V]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[YE]GW;{[ES]|[DT]|[{I|L}C]}[W{M(Oxidation (M))|F}][VP]H 2.2379;1.8844;1.7116;1.6704;1.5501;1.4445;0.41458;0.27231 -;-;-;+;-;-;-;- + 207 1 2.45 60985.8 1.0 328 2686 3015 DOHH2_400M_050219_1,3016 DOHH2_400M_050219_1,3016,SEGNGSHTI True True SEGNGSHTI 13.901115 451.204241931438 684020.25 3015.0 ENSG00000197157|ENST00000354725|SND1 3.155804226795832 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3017 13.907 306.0 305870.0 25 0 91339.0 30491 REEREFRAPT 10 73 430.88819992998486 0 430.8881713747978 PEAK CID FTMS 0 0 0 3015 280052.0625 0.6559773940681828 -50 0.5218410491943359 2 Unmodified _REEREFRAPT_ ENSG00000025796|ENST00000369002|SEC63 1.9063754702782607 0.3961065659209837 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.45 76570.8 1.0 329 2686 3015 DOHH2_400M_050219_1,3017 DOHH2_400M_050219_1,3017,REEREFRAPT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3019 13.915 337.0 180470.0 25 0 8555.7 + + 19467 EAVGTGVR 8 112 394.21953086602826 1179.6367631982848 3 394.2195312380791 MULTI CID FTMS 0 0 0 3018 112591.765625 0.1655075041956409 16 -0.1558971405029297 1 Unmodified _LFFSFLFFL_ nc|ENSG00000161249|Q6E0U4-7|DMKN;nc|ENSG00000161249|Q6E0U4-3|DMKN;A3EZ82;nc|ENSG00000161249|Q6E0U4-4|DMKN;A3EZ79;nc|ENSG00000161249|Q6E0U4-2|DMKN;nc|ENSG00000161249|Q6E0U4-5|DMKN;nc|ENSG00000161249|Q6E0U4-16|DMKN;ENSG00000161249|ENST00000339686|DMKN;nc|ENSG00000161249|Q6E0U4-6|DMKN 21.74664581756881 0.2544899275067181 1 {I|L}V[WQ]{M(Oxidation (M))|F}{I|L} 6 -1 26.828 0.0 0.0 2.2742 0.0 0.0 375.1830616681656 0.0 375.1830616681656 0.0 15.718421963928437 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}V[WQ]{M(Oxidation (M))|F}{I|L} 2.2742 - 99 1 2.45 51536.4 1.0 330 2687 3018 DOHH2_400M_050219_1,3019 DOHH2_400M_050219_1,3019,LFFSFLFFL False False EAVGTGVR 13.915335 394.219531238079 2576465.0 3018.0 nc|ENSG00000161249|Q6E0U4-7|DMKN;;nc|ENSG00000161249|Q6E0U4-3|DMKN;;A3EZ82;;nc|ENSG00000161249|Q6E0U4-4|DMKN;;A3EZ79;;nc|ENSG00000161249|Q6E0U4-2|DMKN;;nc|ENSG00000161249|Q6E0U4-5|DMKN;;nc|ENSG00000161249|Q6E0U4-16|DMKN;;ENSG00000161249|ENST00000339686|DMKN;;nc|ENSG00000161249|Q6E0U4-6|DMKN 2.0091116229693093 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3020 13.929 800.0 122100.0 25 0 7597.6 + 38707 TTSLGQDQA 9 125 460.7197976141072 919.4250422950144 2 460.7195007205009 MULTI CID FTMS 0 0 0 3018 137735.484375 0.2882606053705183 -21 0.2083206176757812 2 Unmodified _TTSLGQDQA_ REV__ENST00000511112.2_1_4:134084133-134129298:+|nuORF 32.30548876998284 0.1201446275138228 1 SNS{I|L}DP 6 -1 28.387 0.0 0.0 3.0875 0.0 0.0 288.14313419130184 0.0 288.14313419130184 0.0 10.595745428790812 0.0 0.0 0 0.0 0.0 1.2134679910804405 0.3494850021680094 SNS{I|L}DP 3.0875 - 522 + 1 2.45 81312.7 0.5199999809265137 331 2687 3018 DOHH2_400M_050219_1,3020 DOHH2_400M_050219_1,3020,TTSLGQDQA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3023 13.938 17.0 2678400.0 25 0 182820.0 + 26398 NTDPHSQEY 9 77 545.7253241663802 1089.4360953995604 2 545.7256347537041 MULTI CID FTMS 0 0 0 3022 3508139.5 0.9359322116421948 2 -0.0225181579589843 1 Unmodified _NTDPHSQEY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 43.77239144664712 0.0547478964384323 1 {[QS]|[NT]}DPT 5 5 40.362 0.0 0.0 3.7048 0.0 0.0 0.0 558.1965426080686 558.1965426080686 14.414543788274798 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.3807196863200844 0.0 {[QS]|[NT]}DPT 3.7048 - 473 + 1 2.45 39158.8 1.0 332 2689 3022 DOHH2_400M_050219_1,3023 DOHH2_400M_050219_1,3023,NTDPHSQEY True True NTDPHSQEY 13.937994 545.725634753704 66324816.0 3022.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 10.263445059458414 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3024 13.952 800.0 110200.0 25 0 9327.9 -1 QSDQGAMNDM 10 102 564.6990303256084 1127.3835077180167 2 564.6997558474541 MULTI CID FTMS 0 0 0 3022 65134.4140625 0.626336482192558 -4 0.0511837005615234 2 2 Oxidation (M) _QSDQGAM(Oxidation (M))NDM(Oxidation (M))_ ENSG00000122707|ENST00000377966|RECK 13.614867670302877 0.6190977555336379 1 YE 2 -1 26.638 0.0 0.0 2.3628 0.0 0.0 0.0 832.2526762580749 832.2526762580749 5.625918950875501 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 YE 2.3628 - 86 + 1 2.45 72702.1 0.4199999868869781 333 2689 3022 DOHH2_400M_050219_1,3024 DOHH2_400M_050219_1,3024,QSDQGAMNDM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3028 13.968 331.0 224930.0 25 0 62873.0 + 35220 SSDPQAQKY 9 90 512.2386207951323 1022.4626886570646 2 512.2375366091728 MULTI CID FTMS 0 0 0 3027 242696.859375 0.5699016572300678 -14 0.1429338455200195 1 Unmodified _SSDPQAQKY_ ENSG00000187522|ENST00000378372|HSPA14 26.88365393820708 0.1891292719743517 1 Q 1 8 13.099 0.0 0.0 1.2811 0.0 0.0 876.3933660025708 0.0 876.3933660025708 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 + Q 1.2811 + + 65 + 1 2.45 62299.4 1.0 334 2692 3027 DOHH2_400M_050219_1,3028 DOHH2_400M_050219_1,3028,SSDPQAQKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3032 13.985 320.0 372400.0 25 0 31532.0 + 34715 SPYERKRL 8 104 350.201520267604 1047.582731403012 3 350.5358459353447 MULTI CID FTMS 0 0 0 3031 156976.453125 0.7149107145525652 -7 0.0471620559692382 1 Unmodified _SPYERKRL_ ENSG00000092470|ENST00000263795|WDR76 32.30548876998284 0.3644845974844379 1 SPYE 4 4 52.423 0.0 0.0 5.0042 0.0 0.0 0.0 568.3692184022644 568.3692184022644 32.245462655597095 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + SPYE 5.0042 + + 94 + 1 2.45 107003.8 1.0 335 2695 3031 DOHH2_400M_050219_1,3032 DOHH2_400M_050219_1,3032,SPYERKRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3036 14.009 800.0 18351.0 25 0 1721.4 -1 0 35 916.6809093927336 2747.020898778401 3 917.0145751833916 MULTI CID FTMS 0 0 0 3035 34418.5859375 0.4921777483341609 1 -0.0163869857788085 1 1 {[DS]|[MA]|[CV]|TT}D 3 -1 7.4473 0.0 0.0 0.2711 0.0 0.0 0.0 2426.9121701009194 2426.9121701009194 0.4575749056067497 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}D 0.2711 - 6 1 2.45 18210.6 0.3499999940395355 336 2698 3035 DOHH2_400M_050219_1,3036 DOHH2_400M_050219_1,3036, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3040 14.034 800.0 52785.0 25 0 6979.5 5235 DKAFLWEKRYY 11 75 506.9300293573887 1517.768258672366 3 506.9298889040947 MULTI CID FTMS 0 0 0 3039 55896.65625 0.7215806174950199 1 -0.0163536071777343 1 Unmodified _DKAFLWEKRYY_ ENSG00000011405|ENST00000691414|PIK3C2A 2.2527281973983926 0.8645194170429107 1 {NN|[MP]|[D{I|L}]|[EV]}VV{[MS]|[{M(Oxidation (M))|F}A]}DK{I|L}AADNK 14 11 {NN|[MP]|[D{I|L}]|[EV]}VV{[MS]|[{M(Oxidation (M))|F}A]}DK + + 30.099 -5.8973 -0.66453 1.9831 1.9831 48.876 0.0 0.0 0.0 0.0 19.65350013324773 0.0 0.0 0 0.5 0.0 0.0 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}VV{[MS]|[{M(Oxidation (M))|F}A]}DK{I|L}AADNK 1.9831 - 162 + 1 2.45 38000.6 0.4000000059604645 337 2701 3039 DOHH2_400M_050219_1,3040 DOHH2_400M_050219_1,3040,DKAFLWEKRYY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3042 14.042 348.0 242810.0 25 0 34462.0 + 43770 YEKNPDSHGY 10 102 403.84418264892025 1208.5107185469608 3 403.8438598513603 MULTI CID FTMS 0 0 0 3041 202005.640625 0.2732732563251861 18 -0.2274112701416015 1 Unmodified _YEKNPDSHGY_ ENSG00000147123|ENST00000377811|NDUFB11;nc|ENSG00000147123|Q9NX14-2|NDUFB11 63.960520009940105 0.0261970246776379 1 [YE]KNPDSHGY 10 0 [YE] + + 55.615 19.833 6.7896 4.602 4.602 55.242 0.0 0.0 0.0 0.0 44.71253489819958 0.0 0.0 0 1.305462187404089 0.0 0.4247425010840047 0.0 + + [YE]KNPDSHGY 4.602 + + 255 + 1 2.45 67772.5 1.0 338 2702 3041 DOHH2_400M_050219_1,3042 DOHH2_400M_050219_1,3042,YEKNPDSHGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3043 14.049 355.0 342830.0 25 0 71600.0 + 31950 RVDPNGSRY 9 82 532.2675202656968 1062.5204875981935 2 532.2680541872978 MULTI CID FTMS 0 0 0 3041 215443.921875 0.5214750314396048 -5 0.0449390411376953 2 Unmodified _RVDPNGSRY_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 40.23920728925047 0.0741434193262949 1 RVDY 4 5 29.949 0.0 0.0 2.8186 0.0 0.0 0.0 526.237665428502 526.237665428502 10.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 RVDY 2.8186 - 111 + 1 2.45 97569.0 1.0 339 2702 3041 DOHH2_400M_050219_1,3043 DOHH2_400M_050219_1,3043,RVDPNGSRY True True RVDPNGSRY 14.048739 532.268054187298 127314616.0 3041.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;;ENST00000545930.5_1_11:61082914-61091715:-|nuORF;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 7.341616789499919 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3044 14.063 800.0 96073.0 25 0 14708.0 + 33361 SGHTRPSSL 9 115 471.2434961310657 940.4724393289314 2 471.2437011599541 MULTI CID FTMS 0 0 0 3041 91271.734375 1.0 0 0.0 3 Unmodified _SGHTRPSSL_ ENSG00000086015|ENST00000361297|MAST2 23.78978130925829 0.2284941198415988 1 [SG]HTS[K{I|L}]DP 9 5 [SG] + + 29.729 3.1606 2.194 3.161 3.161 50.811 0.0 0.0 0.0 0.0 8.759407170204643 0.0 0.0 0 0.6694451763165201 0.0 0.7742275032520141 0.0 [SG]HTS[K{I|L}]DP 3.161 - 332 + 1 2.45 63603.4 0.4300000071525574 340 2702 3041 DOHH2_400M_050219_1,3044 DOHH2_400M_050219_1,3044,SGHTRPSSL False True SGHTRPSSL 14.062555 471.243701159954 372182.40625 3041.0 ENSG00000086015|ENST00000361297|MAST2 5.162591298421224 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3047 14.083 800.0 90326.0 25 0 11215.0 + -1 QIRAVEMK 8 104 495.7737895031937 989.5330260731874 2 495.7741577029228 MULTI CID FTMS 0 0 0 3046 78100.9296875 0.7625302693865758 -10 0.0944108963012695 1 Oxidation (M) _QIRAVEM(Oxidation (M))K_ REV__ENSG00000113569|ENST00000231498|NUP155;REV__ENST00000515054.1_1_5:37301511-37303501:-|nuORF;REV__nc|ENSG00000113569|O75694-2|NUP155 25.399314129420983 0.5099049743284904 1 GT[HK]TT{M(Oxidation (M))|F}K 8 -1 56.257 0.0 0.0 5.6852 0.0 0.0 71.07408339668125 0.0 71.07408339668125 0.0 37.85285367809106 0.0 0.0 0 1.7302046884880935 0.0 0.805462187404089 0.0 GT[HK]TT{M(Oxidation (M))|F}K 5.6852 - 338 1 2.45 57158.6 0.4199999868869781 341 2704 3046 DOHH2_400M_050219_1,3047 DOHH2_400M_050219_1,3047,QIRAVEMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3048 14.086 129.0 668290.0 25 0 117880.0 + 7612 EIRDKKTGL 9 95 353.87702137460184 1058.6092347240055 3 353.8766967654228 MULTI CID FTMS 0 0 0 3046 461220.84375 1.0 0 0.0 2 Unmodified _EIRDKKTGL_ ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-2|RAD50;nc|ENSG00000113522|Q92878-3|RAD50 29.081581746732265 0.1611639662936252 1 {I|L} 1 8 18.495 0.0 0.0 1.7471 0.0 0.0 927.5145214445118 0.0 927.5145214445118 0.0 7.525749891599531 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L} 1.7471 + + 85 + 1 2.45 76643.7 1.0 342 2704 3046 DOHH2_400M_050219_1,3048 DOHH2_400M_050219_1,3048,EIRDKKTGL False True EIRDKKTGL 14.085636 353.876696765423 2100102.5 3046.0 nc|ENSG00000113522|Q92878-2|RAD50;;nc|ENSG00000113522|Q92878-3|RAD50;;ENSG00000113522|ENST00000378823|RAD50 3.012367844581604 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3049 14.099 800.0 132080.0 25 0 7972.2 + 32794 SEERHLKEY 9 157 397.53221837695423 1189.574825731063 3 397.5317565798759 MULTI CID FTMS 0 0 0 3046 93038.359375 0.9578000977511996 -1 0.0040655136108398 3 Unmodified _SEERHLKEY_ ENSG00000126970|ENST00000374839|ZC4H2;ENST00000488608.5_1_X:64139959-64196305:-|nuORF;ENST00000492653.5_1_X:64139109-64196305:-|nuORF;nc|ENSG00000126970|Q9NQZ6-2|ZC4H2;nc|ENSG00000126970|Q9NQZ6-3|ZC4H2;nc|ENSG00000126970|Q9NQZ6-4|ZC4H2;nc|ENSG00000126970|Q9NQZ6-5|ZC4H2 30.43146612281011 0.143988730116972 1 Y{M(Oxidation (M))|F}SEKR[TP]Y 9 7 + 49.804 0.0 0.0 4.1867 4.1867 72.916 0.0 0.0 0.0 24.973024840566467 8.199849938126889 8.199849938126889 1.7609125905568137 0 0.8494850021680094 0.0 0.9247425010840048 0.0 Y{M(Oxidation (M))|F}SEKR[TP]Y;Y{M(Oxidation (M))|F}SKER[TP]Y;YAYEKR[TP]Y;YAYKER[TP]Y;Y{M(Oxidation (M))|F}KSER[TP]Y;Y{M(Oxidation (M))|F}R{I|L}{[NV]|[RG]}{[ES]|[DT]|[{I|L}C]}Y;Y{M(Oxidation (M))|F}R{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}RY;S{M(Oxidation (M))|F}YEKR[TP]Y;Y{M(Oxidation (M))|F}R{I|L}{[NV]|[RG]}{M(Oxidation (M))|F}[MT];S{M(Oxidation (M))|F}YKER[TP]Y 4.1867;4.0387;3.9336;3.7856;3.652;3.5429;3.3791;3.3235;3.2908;3.1755 -;-;-;-;-;-;-;-;-;- 938 + 1 2.45 85435.9 0.3899999856948852 343 2704 3046 DOHH2_400M_050219_1,3049 DOHH2_400M_050219_1,3049,SEERHLKEY False True SEERHLKEY 14.099451 397.531756579876 437257.375 3046.0 nc|ENSG00000126970|Q9NQZ6-5|ZC4H2;;ENSG00000126970|ENST00000374839|ZC4H2;;nc|ENSG00000126970|Q9NQZ6-4|ZC4H2;;ENST00000492653.5_1_X:64139109-64196305:-|nuORF;;ENST00000488608.5_1_X:64139959-64196305:-|nuORF;;nc|ENSG00000126970|Q9NQZ6-3|ZC4H2;;nc|ENSG00000126970|Q9NQZ6-2|ZC4H2 6.004456520080566 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3053 14.121 636.0 71628.0 25 0 6346.0 + 2706 ATESSNQEY 9 84 514.7123450782183 1027.4101372232365 2 514.7125732302666 MULTI CID FTMS 0 0 0 3052 81363.515625 0.2148691898213883 -25 0.2621707916259765 1 Unmodified _ATESSNQEY_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 15.847184025352805 0.4077185912009129 1 [TA]E 3 6 19.657 0.0 0.0 1.9133 0.0 0.0 0.0 723.2603929207552 723.2603929207552 2.667411071496545 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.5387254899964358 0.0 + [TA]E 1.9133 + + 118 1 2.45 39025.3 1.0 344 2707 3052 DOHH2_400M_050219_1,3053 DOHH2_400M_050219_1,3053,ATESSNQEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3054 14.133 688.0 142960.0 25 0 7491.9 + 37098 TGSHIHLH 8 133 451.2349909965424 900.4554290598848 2 451.2345458865166 MULTI CID FTMS 0 0 0 3052 105409.453125 0.161535419096249 -17 0.1557531356811523 2 Unmodified _TGSHIHLH_ REV__ENSG00000177853|ENST00000316045|ZNF518A 26.34127834903884 0.4900704351052977 1 {[SA]|[TG]}SPP 5 -1 40.956 0.0 0.0 4.5483 0.0 0.0 0.0 458.2253817193969 458.2253817193969 27.033377398063543 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.5 0.0 {[SA]|[TG]}SPP 4.5483 - 585 + 1 2.45 79841.6 1.0 345 2707 3052 DOHH2_400M_050219_1,3054 DOHH2_400M_050219_1,3054,TGSHIHLH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3059 14.162 800.0 137750.0 25 0 19451.0 + 25780 NKDELDEEKKD 11 102 454.8824719245827 1361.6255863739482 3 454.8824951052666 MULTI CID FTMS 0 0 0 3058 72594.5 0.2863651825941323 -6 0.0459003448486328 1 Unmodified _NKDELDEEKKD_ REV__ENSG00000120694|ENST00000320027|HSPH1;REV__nc|ENSG00000120694|Q92598-2|HSPH1;REV__nc|ENSG00000120694|Q92598-3|HSPH1;REV__nc|ENSG00000120694|Q92598-4|HSPH1 5.868138319507137 0.8474616764770629 1 {[RE]|[WV]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 -1 {[RE]|[WV]}HQ + + 50.711 10.916 1.9838 3.7243 3.7243 52.384 0.0 0.0 0.0 0.0 30.60016905927597 0.0 0.0 0 0.5 0.0 0.3807196863200844 1.1549471895720984 {[RE]|[WV]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 3.7243 - 291 + 1 2.45 90533.6 0.4199999868869781 346 2711 3058 DOHH2_400M_050219_1,3059 DOHH2_400M_050219_1,3059,NKDELDEEKKD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3062 14.173 281.0 219640.0 25 0 16642.0 11012 GASTKEGSSP 10 107 460.7197976141072 919.4250422950144 2 460.7196227908134 MULTI CID FTMS 0 0 0 3061 319451.625 0.6685664135640124 5 -0.0650367736816406 1 Unmodified _GASTKEGSSP_ ENST00000416802.1_1_2:27356078-27357162:-|nuORF;ENST00000468045.5_1_2:27356078-27356276:-|nuORF 29.081581746732265 0.3152867722954398 1 SNS{I|L}[DP] 6 8 32.654 0.0 0.0 3.5515 0.0 0.0 288.14522856744503 0.0 288.14522856744503 0.0 10.927491191775395 0.0 0.0 0 0.0 0.0 1.4896518287104437 0.2887254899964357 SNS{I|L}[DP] 3.5515 - 888 + 1 2.45 51952.7 1.0 347 2713 3061 DOHH2_400M_050219_1,3062 DOHH2_400M_050219_1,3062,GASTKEGSSP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3063 14.182 463.0 231790.0 25 0 19315.0 + 6659 EAYDRRLAH 9 114 377.5281234932887 1129.5625410800662 3 377.5278808474541 MULTI CID FTMS 0 0 0 3061 91851.3515625 0.1715936802940121 -13 0.1525173187255859 2 Unmodified _EAYDRRLAH_ ENSG00000104738|ENST00000649973|MCM4 20.453626601364224 0.2830276176381075 1 EH[DP]H 5 6 19.208 0.0 0.0 1.7005 0.0 0.0 0.0 511.3103880381698 511.3103880381698 0.796896906561031 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EH[DP]H 1.7005 - 75 + 1 2.45 87536.6 1.0 348 2713 3061 DOHH2_400M_050219_1,3063 DOHH2_400M_050219_1,3063,EAYDRRLAH False True EAYDRRLAH 14.181503 377.527880847454 1467987.125 3061.0 ENSG00000104738|ENST00000649973|MCM4 0.1884891589482625 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3066 14.193 278.0 186370.0 25 0 10396.0 + 26399 NTDPHSQEY 9 90 545.7253241663802 1089.4360953995604 2 545.7254516482353 MULTI CID FTMS 0 0 0 3065 254432.40625 0.0678797079463367 28 -0.4842510223388672 1 Unmodified _NTDPHSQEY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 49.93300154707207 0.0405168250806675 1 YPNWY 5 7 26.454 0.0 0.0 2.4282 0.0 0.0 348.1333001884486 0.0 348.1333001884486 0.0 19.41962823435958 0.0 0.0 0 0.0 0.0 0.0 0.0 YPNWY 2.4282 - 200 + 1 2.45 47093.2 1.0 349 2715 3065 DOHH2_400M_050219_1,3066 DOHH2_400M_050219_1,3066,NTDPHSQEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3067 14.207 800.0 137450.0 25 0 54603.0 + 19084 LDRNITIM 8 95 488.2677065274997 0 488.2690307497978 PEAK CID FTMS 0 0 0 3065 92752.7890625 0.4303974502328035 -117 1.1898117065429688 2 Unmodified _LDRNITIM_ REV__ENSG00000060339|ENST00000265872|CCAR1;REV__ENST00000398676.3_1_10:70532822-70546470:+|nuORF;REV__nc|ENSG00000060339|Q8IX12-2|CCAR1 9.347437153973935 0.5488964601725408 1 Y 1 -1 3.0989 0.0 0.0 0.318 0.0 0.0 611.3390801919151 197.09328638248283 808.4323665743979 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.318 - 5 + 1 2.45 88649.1 0.4300000071525574 350 2715 3065 DOHH2_400M_050219_1,3067 DOHH2_400M_050219_1,3067,LDRNITIM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3070 14.218 201.0 395080.0 25 0 55464.0 + -1 IQRLETMK 8 84 517.7864575819211 1033.5583622306422 2 517.7869140505791 MULTI CID FTMS 0 0 0 3069 339406.0625 0.0021917919188151 -24 0.2427797317504882 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 1 KTT[{I|L}P][WP]K 8 -1 50.227 0.0 0.0 4.8596 0.0 0.0 63.999086869249545 0.0 63.999086869249545 0.0 30.82432436185812 0.0 0.0 0 1.805462187404089 0.0 1.274227503252014 0.3054621874040891 KTT[{I|L}P][WP]K 4.8596 - 239 + 1 2.45 65634.2 1.0 351 2717 3069 DOHH2_400M_050219_1,3070 DOHH2_400M_050219_1,3070,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3071 14.225 391.0 188660.0 25 0 30097.0 + + 37085 SAMVRSEA 8 103 425.7080292225687 849.4015055119374 2 425.7079955935478 MULTI CID FTMS 0 0 0 3069 174033.65625 0.1803274797599854 -13 0.1444768905639648 2 Unmodified _TGMVERSA_ ENSG00000198843|ENST00000471696|SELENOT;ENST00000485923.1_1_3:150321131-150321287:+|nuORF;ENST00000471696.5_2_3:150321089-150340178:+|nuORF 25.399314129420983 0.5099049743284904 1 {[SA]|[TG]}MV 4 -1 43.5 0.0 0.0 5.1212 0.0 0.0 0.0 458.2005522211634 458.2005522211634 31.51023442440469 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 {[SA]|[TG]}MV 5.1212 + + 86 + 1 2.45 64495.5 1.0 352 2717 3069 DOHH2_400M_050219_1,3071 DOHH2_400M_050219_1,3071,TGMVERSA False False SAMVRSEA 14.224525 425.707995593548 8282831.0 3069.0 ENSG00000198843|ENST00000471696|SELENOT;;ENST00000485923.1_1_3:150321131-150321287:+|nuORF;;ENST00000471696.5_2_3:150321089-150340178:+|nuORF 0.4972829918066661 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3072 14.231 337.0 183990.0 25 0 42338.0 + 35221 SSDPQAQKY 9 79 512.2386207951323 1022.4626886570646 2 512.2385742068291 MULTI CID FTMS 0 0 0 3069 222423.5 0.5222956802298422 11 -0.1155681610107421 3 Unmodified _SSDPQAQKY_ ENSG00000187522|ENST00000378372|HSPA14 37.97399986684836 0.0865783450051559 1 Q 1 8 14.604 0.0 0.0 1.4283 0.0 0.0 876.3936101431958 0.0 876.3936101431958 0.0 -3.24417185552797 -3.24417185552797 0.0 0 0.0 0.0 0.0 0.0 + Q 1.4283 + + 63 + 1 2.45 52141.5 1.0 353 2717 3069 DOHH2_400M_050219_1,3072 DOHH2_400M_050219_1,3072,SSDPQAQKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3075 14.251 800.0 122760.0 25 0 23127.0 + 6660 EAYDRRLAH 9 80 565.7887720934262 1129.5629912536524 2 565.7886840701103 MULTI CID FTMS 0 0 0 3074 69728.15625 0.5211341488336788 -1 0.003890037536621 1 Unmodified _EAYDRRLAH_ ENSG00000104738|ENST00000649973|MCM4 22.736283301280096 0.2418982879461534 1 EG 2 8 25.361 0.0 0.0 2.2452 0.0 0.0 0.0 940.4982783748438 940.4982783748438 4.660225703182164 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 EG 2.2452 - 33 + 1 2.45 78305.7 0.449999988079071 354 2719 3074 DOHH2_400M_050219_1,3075 DOHH2_400M_050219_1,3075,EAYDRRLAH False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3076 14.261 571.0 122510.0 25 0 41172.0 40234 VGSGYGGS 8 61 683.2996459551914 682.2923694885914 1 683.2991210818291 MULTI CID FTMS 0 0 0 3074 91410.6015625 0.7633872502651828 3 -0.0345163345336914 2 Unmodified _VGSGYGGS_ CON__Q99456;ENSG00000187242|ENST00000251643|KRT12 0.7936320650641473 0.8195151834710337 1 E[PA]TEH 6 8 + 31.229 0.0 0.0 4.5771 4.5771 87.366 0.0 0.0 0.0 19.80259828933836 10.99092415709281 10.99092415709281 31.229273325025662 0 0.0 0.0 0.9247425010840048 0.0 E[PA]TEH 4.5771 - 27 + 1 2.45 57212.0 1.0 355 2719 3074 DOHH2_400M_050219_1,3076 DOHH2_400M_050219_1,3076,VGSGYGGS False False False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 3084 14.301 800.0 110860.0 25 0 41952.0 -1 0 83 472.2730783915001 471.2658019249001 1 472.2717468142509 MULTI CID FTMS 0 0 0 3083 71277.15625 0.2401490841855641 -54 0.5147943496704102 1 1 Y 1 -1 11.783 0.0 0.0 2.5002 0.0 0.0 290.1918253397423 0.0 290.1918253397423 0.0 0.5456115633688263 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5002 - 40 + 1 2.45 72685.1 0.4099999964237213 356 2726 3083 DOHH2_400M_050219_1,3084 DOHH2_400M_050219_1,3084, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3086 14.312 423.0 197330.0 25 0 27454.0 + 31951 RVDPNGSRY 9 104 532.2675202656968 1062.5204875981935 2 532.2673828005791 MULTI CID FTMS 0 0 0 3085 136732.796875 0.3309573040105786 20 -0.4953107833862304 1 Unmodified _RVDPNGSRY_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 20.41453444215458 0.284085796332423 1 [RV]DY 4 5 18.812 0.0 0.0 1.7705 0.0 0.0 0.0 526.2365816705686 526.2365816705686 5.713337517843655 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [RV]DY 1.7705 - 10 + 1 2.45 65255.6 1.0 357 2727 3085 DOHH2_400M_050219_1,3086 DOHH2_400M_050219_1,3086,RVDPNGSRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3087 14.325 800.0 149510.0 25 0 8658.1 + 30486 REEGAVDKSY 10 123 577.2778641295819 1152.5411753259636 2 577.2779418826103 MULTI CID FTMS 0 0 0 3085 94288.78125 0.5665800965625494 -5 0.0324649810791015 2 Unmodified _REEGAVDKSY_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 39.92294525591503 0.1583807461695373 1 {[QD]|[EN]|[WG]|[KD]|[RS]}[NG]QVDKSY 10 3 + 62.202 0.0 0.0 5.3969 5.3969 75.111 0.0 0.0 0.0 0.2680249241196719 8.590919918922012 0.2680249241196719 0.2680249241196719 0 1.579689690656103 0.0 0.8494850021680094 0.3807196863200844 {[QD]|[EN]|[WG]|[KD]|[RS]}[NG]QVDKSY;{[RE]|[WV]}EQVDKSY;{[QD]|[EN]|[WG]|[KD]|[RS]}S[DP]VDKSY;[TP]D[QT]VDKSY;[TA]A[NG]QVDKSY;{[QD]|[EN]|[WG]|[KD]|[RS]}[NG]GAVDKSY;{[RE]|[WV]}EGAVDKSY;[TA]A[NG]GAVDKSY;[TP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}AVDKSY;[TA]AS[DP]VDKSY 5.3969;5.3737;5.3737;5.1966;5.1395;5.0998;5.0728;4.8455;4.7821;4.548 -;-;-;-;-;-;+;-;-;- + 797 1 2.45 91966.2 0.449999988079071 358 2727 3085 DOHH2_400M_050219_1,3087 DOHH2_400M_050219_1,3087,REEGAVDKSY False True REEGAVDKSY 14.325429 577.27794188261 749977.75 3085.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 6.062853972117106 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3088 14.327 48.0 1471500.0 25 0 86229.0 + 11285 GEVDYKKKY 9 88 377.2014209908917 1128.5824335728753 3 377.2009460330009 MULTI CID FTMS 0 0 0 3085 655017.0625 0.497465271610387 -6 0.0365266799926757 3 Unmodified _GEVDYKKKY_ ENSG00000169592|ENST00000563197|INO80E;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;ENST00000563040.5_1_16:30007580-30010601:+|nuORF;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;nc|ENSG00000169592|Q8NBZ0-2|INO80E 27.628801355627647 0.1796483985696185 1 WVDYKKK 7 3 47.383 0.0 0.0 4.1985 0.0 0.0 0.0 178.0514315240844 178.0514315240844 34.61885071473265 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 WVDYKKK 4.1985 - 125 + 1 2.45 67561.9 1.0 359 2727 3085 DOHH2_400M_050219_1,3088 DOHH2_400M_050219_1,3088,GEVDYKKKY False True GEVDYKKKY 14.326704 377.200946033001 6523666.875 3085.0 ENSG00000169592|ENST00000563197|INO80E;;nc|ENSG00000169592|Q8NBZ0-2|INO80E;;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;;ENST00000563040.5_1_16:30007580-30010601:+|nuORF 6.497428894042969 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3093 14.355 800.0 147960.0 25 0 30559.0 + 28302 PRRPPPPPP 9 115 505.7986605846251 1009.5827682360502 2 505.7986938357353 MULTI CID FTMS 0 0 0 3092 84294.0625 0.3895371241987597 -7 0.0616865158081054 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 48.345845343767074 0.0439967357579942 1 PR[YK]PPP 7 4 35.94 0.0 0.0 3.5598 0.0 0.0 156.10135085273595 0.0 156.10135085273595 0.0 7.110403483680656 0.0 0.0 0 1.841129063296272 0.0 0.0 0.5 PR[YK]PPP 3.5598 - 219 1 2.45 97447.7 0.5099999904632568 360 2731 3092 DOHH2_400M_050219_1,3093 DOHH2_400M_050219_1,3093,PRRPPPPPP True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3094 14.369 800.0 145750.0 25 0 25822.0 42638 VTVKTKSLE 9 97 502.8032422732098 0 502.8032409548759 PEAK CID FTMS 0 0 0 3092 90494.4453125 1.0 0 0.0 2 Unmodified _VTVKTKSLE_ ENSG00000114805|ENST00000460012|PLCH1;nc|ENSG00000114805|Q4KWH8-2|PLCH1;nc|ENSG00000114805|Q4KWH8|PLCH1 6.2057823575117 0.3444685223463735 1 V 1 8 2.4743 0.0 0.0 0.24654 0.0 0.0 835.4650680651713 66.03565393619374 901.500722001365 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.24654 + + 17 + 1 2.45 96052.6 0.4799999892711639 361 2731 3092 DOHH2_400M_050219_1,3094 DOHH2_400M_050219_1,3094,VTVKTKSLE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3096 14.374 96.0 351540.0 25 0 28846.0 + 26980 PEGFSFESE 9 74 514.7123450782183 1027.4101372232365 2 514.7120849490166 MULTI CID FTMS 0 0 0 3095 378665.34375 1.0 0 0.0 1 Unmodified _PEGFSFESE_ ENSG00000215113|ENST00000542739|CXorf49B;ENSG00000215115|ENST00000535490|CXorf49 10.823927491677226 0.5436922275383211 1 {[ES]|[DT]|[{I|L}C]}[YR]EESE 8 5 {[ES]|[DT]|[{I|L}C]}[YR]EE + + 19.949 -4.1363 -0.52139 1.9416 1.9416 48.835 0.0 0.0 0.0 0.0 2.95880017344075 0.0 0.0 0 0.0 0.0 0.5 0.0 {[ES]|[DT]|[{I|L}C]}[YR]EESE 1.9416 - 36 + 1 2.45 32220.1 1.0 362 2732 3095 DOHH2_400M_050219_1,3096 DOHH2_400M_050219_1,3096,PEGFSFESE False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3097 14.385 612.0 54894.0 25 0 5785.7 13526 HNQPIPWK 8 76 510.2750951901194 1018.5356374470388 2 510.2751953005791 MULTI CID FTMS 0 0 0 3095 128146.5625 0.1652528107795694 -10 0.0997037887573242 2 Unmodified _HNQPIPWK_ ENSG00000111412|ENST00000261318|SPRING1 4.75600775471527 0.7954636275367004 1 K 1 7 14.118 0.0 0.0 1.3861 0.0 0.0 872.4300293921546 0.0 872.4300293921546 0.0 3.0089496582631714 0.0 0.0 0 0.0 0.0 0.0 0.1643943297944484 + K 1.3861 + + 50 + 1 2.45 30935.0 1.0 363 2732 3095 DOHH2_400M_050219_1,3097 DOHH2_400M_050219_1,3097,HNQPIPWK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3098 14.398 800.0 78704.0 25 0 3961.2 -1 0 68 753.9922807883347 2258.955012965204 3 754.3259765505791 MULTI CID FTMS 0 0 0 3095 87720.4453125 0.6926002875456985 -3 0.0381479263305664 3 1 [PS]{[YD]|[{M(Oxidation (M))|F}M]}{[CP]|[EA]}{M(Oxidation (M))|F}DV 9 -1 33.707 0.0 0.0 1.4921 0.0 0.0 0.0 1232.5054500728484 1232.5054500728484 15.942124970647036 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.0 0.0 [PS]{[YD]|[{M(Oxidation (M))|F}M]}{[CP]|[EA]}{M(Oxidation (M))|F}DV 1.4921 - 505 1 2.45 51257.8 0.4199999868869781 364 2732 3095 DOHH2_400M_050219_1,3098 DOHH2_400M_050219_1,3098, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3100 14.404 184.0 315360.0 25 0 22702.0 + 12427 GTSPPSVEK 9 99 451.2349909965424 900.4554290598848 2 451.2350036501884 MULTI CID FTMS 0 0 0 3099 301887.78125 0.462629942747419 9 -0.2365837097167968 1 Unmodified _GTSPPSVEK_ ENSG00000181143|ENST00000397910|MUC16 47.594388314883695 0.0456443387682827 1 {[SA]|[TG]}SPPSVEK 9 0 + 59.639 0.0 0.0 6.6232 6.6232 94.795 0.0 0.0 0.0 40.946036436414175 13.761746062902148 13.761746062902148 43.56185952987164 0 0.3494850021680094 1.5228787452803376 1.113982988912431 0.1595680409956017 + + {[SA]|[TG]}SPPSVEK;[PS]P{NN|[MP]|[D{I|L}]|[EV]}[KS]{[SA]|[TG]};{[SA]|[TG]}V[PS]V[PS]{[SA]|[TG]};[VG]T[PS]V[PS]{[SA]|[TG]} 6.6232;1.7854;1.5547;0.57274 +;-;-;- + 218 + 1 2.45 51698.5 1.0 365 2733 3099 DOHH2_400M_050219_1,3100 DOHH2_400M_050219_1,3100,GTSPPSVEK True True GTSPPSVEK 14.40411 451.235003650188 6248990.0 3099.0 ENSG00000181143|ENST00000397910|MUC16 7.866946697235107 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3101 14.418 800.0 250670.0 25 0 57588.0 -1 MFKLRVCC 8 101 536.7606725824362 1071.5067922316723 2 536.7619506716728 MULTI CID FTMS 0 0 0 3099 83201.1015625 0.3187247408240956 -3 0.063385009765625 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FKLRVC(Carbamidomethyl (C))C_ ENST00000463504.5_1_3:31921019-32010971:-|nuORF 5.230669730166228 0.792582437072536 1 Y 1 -1 12.218 0.0 0.0 1.1403 0.0 0.0 890.4324799531552 0.0 890.4324799531552 0.0 1.3810320596947443 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1403 - 37 + 1 2.45 155502.8 0.4399999976158142 366 2733 3099 DOHH2_400M_050219_1,3101 DOHH2_400M_050219_1,3101,MFKLRVCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3102 14.432 800.0 107460.0 25 0 14329.0 -1 HPTYSCKYD 9 70 585.745414913296 0 585.7444946169853 PEAK CID FTMS 0 0 0 3099 119833.8203125 0.925837193068442 -10 0.1249246597290039 3 Carbamidomethyl (C) _HPTYSC(Carbamidomethyl (C))KYD_ ENSG00000126351|ENST00000450525|THRA;nc|ENSG00000126351|P10827-3|THRA;nc|ENSG00000126351|P10827-4|THRA;nc|ENSG00000126351|P10827|THRA 2.059750862983233 0.3444685223463734 1 R 1 -1 5.4846 0.0 0.0 0.46897 0.0 0.0 584.179598281867 426.1863802545532 1010.3659785364202 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.46897 - 2 + 1 2.45 70815.8 0.5199999809265137 367 2733 3099 DOHH2_400M_050219_1,3102 DOHH2_400M_050219_1,3102,HPTYSCKYD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3105 14.45 680.0 246110.0 25 0 8568.0 + -1 QYMQLMEL 8 149 544.2428017209369 1086.4710505086737 2 544.2426025271416 MULTI CID FTMS 0 0 0 3104 186696.546875 0.558797125411513 -1 0.0038299560546875 1 2 Oxidation (M) _QYM(Oxidation (M))QLM(Oxidation (M))EL_ REV__nc|ENSG00000152582|Q9C093-4|SPEF2 8.593279151180031 0.7721714526254883 1 Y 1 -1 11.783 0.0 0.0 1.0845 0.0 0.0 905.396600901055 0.0 905.396600901055 0.0 0.5236767526000641 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0845 + + 433 + 1 2.419 127923.0 1.0 368 2735 3104 DOHH2_400M_050219_1,3105 DOHH2_400M_050219_1,3105,QYMQLMEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3106 14.463 800.0 183710.0 25 0 10622.0 + + 6506 DVQQKRTL 8 130 493.7859726985251 0 493.7850524783134 PEAK CID FTMS 0 0 0 3104 157865.078125 0.7403200766628224 -3 0.0664482116699218 2 Unmodified _EAKGKKASAP_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 16.149105407346934 0.3281668441439271 1 K 1 -1 10.242 0.0 0.0 1.0392 0.0 0.0 657.3821738132627 197.0574740045532 854.4396478178159 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 K 1.0392 + + 152 + 1 2.419 113378.3 0.9200000166893004 369 2735 3104 DOHH2_400M_050219_1,3106 DOHH2_400M_050219_1,3106,EAKGKKASAP False False DVQQKRTL 14.463384 493.785052478313 693854.8125 3104.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 1.7021116216977437 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3107 14.477 800.0 137870.0 25 0 20786.0 + 36111 SVRYSSSK 8 138 478.2470770099336 0 478.2455932497978 PEAK CID FTMS 0 0 0 3104 95485.359375 0.807389886419607 1 -0.0414371490478515 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SVRYSSSK_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 63.22749603027936 0.0121400836122753 1 SSSYR 5 5 54.663 0.0 0.0 5.727 0.0 0.0 146.10453165072016 225.0890749567016 371.19360660742177 0.0 0.0 0.0 0.0 0 2.1549471895720984 0.0 0.805462187404089 0.3252574989159953 SSSYR 5.727 - 116 + 1 2.419 86964.1 0.7900000214576721 370 2735 3104 DOHH2_400M_050219_1,3107 DOHH2_400M_050219_1,3107,SVRYSSSK True False SVRYSSSK 14.477199 478.245593249798 602632.75 3104.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 4.034651756286621 2.0 True 8.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 3109 14.481 0.46 132040000.0 25 0 21654000.0 + -1 IQRLETMK 8 69 517.7864575819211 1033.5583622306422 2 517.7872802615166 MULTI CID FTMS 0 0 0 3108 133210096.0 0.8602345219375208 -5 0.1379547119140625 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 1 T{M(Oxidation (M))|F}K 3 -1 32.664 0.0 0.0 3.1603 0.0 0.0 639.3683730722422 0.0 639.3683730722422 0.0 16.288624837399293 0.0 0.0 0 1.0 0.0 0.0 0.2742275032520141 T{M(Oxidation (M))|F}K 3.1603 + + 101 + 1 2.419 50536.3 1.0 371 2736 3108 DOHH2_400M_050219_1,3109 DOHH2_400M_050219_1,3109,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3110 14.485 216.0 225260.0 25 0 39759.0 + 37086 TGMVERSA 8 87 425.7080292225687 849.4015055119374 2 425.7081481814384 MULTI CID FTMS 0 0 0 3108 296592.28125 0.3073183644274398 6 -0.1579818725585937 2 Unmodified _TGMVERSA_ REV__ENST00000510707.1_1_4:85165918-85166545:+|nuORF 25.399314129420983 0.5099049743284904 1 {[SA]|[TG]}MV 4 -1 43.94 0.0 0.0 5.1731 0.0 0.0 0.0 458.2016695611938 458.2016695611938 31.17595277211517 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 {[SA]|[TG]}MV 5.1731 + + 59 + 1 2.419 41312.4 1.0 372 2736 3108 DOHH2_400M_050219_1,3110 DOHH2_400M_050219_1,3110,TGMVERSA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3112 14.501 800.0 366100.0 25 0 30514.0 + 29667 QPAGGGTDISR 11 128 529.7649278782316 1057.515302823263 2 529.7645141482353 MULTI CID FTMS 0 0 0 3111 145190.109375 0.5679308095215568 -3 0.0535440444946289 1 Unmodified _QPAGGGTDISR_ REV__ENSG00000049246|ENST00000377532|PER3;REV__nc|ENSG00000049246|P56645|PER3 10.799506525563784 0.8105043987015127 1 AGRN 4 -1 24.157 0.0 0.0 2.2843 0.0 0.0 641.2764759748062 0.0 641.2764759748062 0.0 10.661837734644593 0.0 0.0 0 0.0 0.0 0.0 0.0 AGRN 2.2843 - 694 1 2.419 224751.3 0.8899999856948853 373 2737 3111 DOHH2_400M_050219_1,3112 DOHH2_400M_050219_1,3112,QPAGGGTDISR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3113 14.515 800.0 140300.0 25 0 11519.0 + -1 GVDEMLMER 9 131 548.2426745997903 1094.4707962663806 2 548.2427245974541 MULTI CID FTMS 0 0 0 3111 148699.671875 0.9231155061883736 -3 0.0535440444946289 2 Oxidation (M) _GVDEM(Oxidation (M))LMER_ REV__ENSG00000069275|ENST00000367142|NUCKS1;REV__nc|ENSG00000069275|Q9H1E3-2|NUCKS1 7.289230182591677 0.6602208344931196 1 K 1 -1 9.7539 0.0 0.0 0.8912 0.0 0.0 948.365356058176 0.0 948.365356058176 0.0 0.8014849593622468 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.8912 - 81 + 1 2.419 86810.3 0.7599999904632568 374 2737 3111 DOHH2_400M_050219_1,3113 DOHH2_400M_050219_1,3113,GVDEMLMER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3115 14.532 800.0 76341.0 25 0 3360.4 + 11286 GEVDYKKKY 9 100 565.2982055544853 0 565.2982055544853 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _GEVDYKKKY_ ENSG00000169592|ENST00000563197|INO80E;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;ENST00000563040.5_1_16:30007580-30010601:+|nuORF;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;nc|ENSG00000169592|Q8NBZ0-2|INO80E 47.594388314883695 0.0382481814706656 1 VD[YK]KK 6 3 34.308 0.0 0.0 3.0399 0.0 0.0 186.063432832974 178.0522860162719 364.1157188492459 0.0 0.0 0.0 0.0 0 1.8494850021680087 0.0 0.0 0.2396518287104437 + VD[YK]KK 3.0399 + + 81 + 1 2.359 51769.4 0.6200000047683716 375 2738 3114 DOHH2_400M_050219_1,3115 DOHH2_400M_050219_1,3115,GEVDYKKKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3116 14.539 372.0 480150.0 25 0 63620.0 12266 GRAWGAWPR 9 91 528.7766158252266 1055.538678717253 2 528.7762939333916 MULTI CID FTMS 0 0 0 3114 176861.34375 0.6720731566554867 1 -0.0376062393188476 2 Unmodified _GRAWGAWPR_ ENST00000393203.2_1_1:117452739-117484357:+|nuORF 6.723162845929126 0.6799819581413107 1 R 1 8 11.594 0.0 0.0 1.0984 0.0 0.0 881.4269061115875 0.0 881.4269061115875 0.0 0.796896906561031 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 1.0984 + + 42 + 1 2.359 137900.6 1.0 376 2738 3114 DOHH2_400M_050219_1,3116 DOHH2_400M_050219_1,3116,GRAWGAWPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3117 14.553 800.0 124240.0 25 0 7536.9 + -1 QCSTDVQCST 10 129 593.2279279601356 1184.4413029870711 2 593.2267944216728 MULTI CID FTMS 0 0 0 3114 86045.28125 0.4436041559881911 -5 0.1164827346801757 3 2 Carbamidomethyl (C) _QC(Carbamidomethyl (C))STDVQC(Carbamidomethyl (C))ST_ REV__ENSG00000135749|ENST00000258229|PCNX2 2.9952420565917617 0.7127817445270067 1 DDQ{M(Oxidation (M))|F} 4 -1 11.427 0.0 0.0 0.96473 0.0 0.0 0.0 676.2639354023962 676.2639354023962 4.832881222565248 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DDQ{M(Oxidation (M))|F} 0.96473 - 85 + 1 2.359 79125.7 0.6000000238418579 377 2738 3114 DOHH2_400M_050219_1,3117 DOHH2_400M_050219_1,3117,QCSTDVQCST False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3119 14.571 800.0 165180.0 25 0 37915.0 15939 ISYRSLPPA 9 108 502.28307018090186 0 502.2814208865166 PEAK CID FTMS 0 0 0 3118 81322.7890625 0.8291989754857246 -2 0.0672101974487304 1 Unmodified _ISYRSLPPA_ ENSG00000123384|ENST00000243077|LRP1;ENST00000556356.1_1_12:57598740-57602363:+|nuORF 6.723162845929126 0.3444685223463734 1 R 1 8 3.4949 0.0 0.0 0.3486 0.0 0.0 363.1808121373912 480.2443959872893 843.4252081246805 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.3486 + + 4 + 1 2.359 103691.4 0.6600000262260437 378 2739 3118 DOHH2_400M_050219_1,3119 DOHH2_400M_050219_1,3119,ISYRSLPPA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3121 14.587 781.0 252210.0 25 0 20442.0 + 771 AESASEAAKKY 11 136 577.7874348168339 1153.5603167004676 2 577.7876464724541 MULTI CID FTMS 0 0 0 3120 253037.9375 0.8384142843711779 2 -0.0641450881958007 1 Unmodified _AESASEAAKKY_ ENSG00000185825|ENST00000345046|BCAP31;nc|ENSG00000185825|P51572-2|BCAP31 94.90867108109512 0.0004917860609384 1 AESASEAAKKY 11 0 + 97.799 0.0 0.0 8.478 8.478 90.875 0.0 0.0 0.0 27.31981930958328 7.66589350960075 7.66589350960075 7.66589350960075 0 1.6861818737241734 1.6989700043360187 1.0941876774005248 0.2887254899964357 + + AESASEAAKKY;AESASEAAKYK;AESAS[RD]KKY;ADTASEAAKKY;AESAS[RD]KYK;DATASEAAKKY;ADTASEAAKYK;ADTAS[RD]KKY;DATASEAAKYK;{[CP]|[EA]}SAKKASYEA 8.478;7.8134;7.218;6.7388;6.5535;6.1097;6.0743;5.4789;5.4451;5.118 +;-;-;-;-;-;-;-;-;- + 3381 + 1 2.359 148722.4 1.0 379 2740 3120 DOHH2_400M_050219_1,3121 DOHH2_400M_050219_1,3121,AESASEAAKKY True True AESASEAAKKY 14.586536 577.787646472454 1292550.625 3120.0 nc|ENSG00000185825|P51572-2|BCAP31;;ENSG00000185825|ENST00000345046|BCAP31 7.399655977884929 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3122 14.59 207.0 506140.0 25 0 32013.0 + + 43798 REVSPAHQY 9 105 543.7694742128758 1085.5243954925515 2 543.7698242068291 MULTI CID FTMS 0 0 0 3120 368019.65625 0.634979129734685 -3 0.0855598449707031 2 Unmodified _YETARRSGF_ ENST00000595226.1_1_19:42461000-42461518:-|nuORF;ENST00000598057.1_1_19:42461155-42461461:-|nuORF;ENSG00000105404|ENST00000222008|RABAC1 22.736283301280096 0.2418982879461534 1 HQY 3 -1 33.5 0.0 0.0 3.0861 0.0 0.0 639.3360896625504 0.0 639.3360896625504 0.0 22.26280941356464 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 HQY 3.0861 - 164 1 2.359 84748.2 1.0 380 2740 3120 DOHH2_400M_050219_1,3122 DOHH2_400M_050219_1,3122,YETARRSGF False False REVSPAHQY 14.590477 543.769824206829 9572373.75 3120.0 ENST00000595226.1_1_19:42461000-42461518:-|nuORF;;ENST00000598057.1_1_19:42461155-42461461:-|nuORF;;ENSG00000105404|ENST00000222008|RABAC1 6.220425605773926 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3123 14.604 800.0 129000.0 25 0 15406.0 39624 VDRHNLYF 8 107 532.2675202656968 1062.5204875981935 2 532.2671386599541 MULTI CID FTMS 0 0 0 3120 85634.5078125 0.2072755511745092 33 -0.4821929931640625 3 Unmodified _VDRHNLYF_ ENSG00000196187|ENST00000366835|TMEM63A 13.50788311687929 0.7113601687236069 1 Y 1 7 13.099 0.0 0.0 1.2328 0.0 0.0 881.4458548851061 0.0 881.4458548851061 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2328 + + 29 + 1 2.359 81751.3 0.6499999761581421 381 2740 3120 DOHH2_400M_050219_1,3123 DOHH2_400M_050219_1,3123,VDRHNLYF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3125 14.621 800.0 178840.0 25 0 41390.0 + 28303 PRRPPPPPP 9 116 505.7986605846251 1009.5827682360502 2 505.7982055544853 MULTI CID FTMS 0 0 0 3124 172124.078125 0.7954144860223712 3 -0.0970993041992187 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 48.345845343767074 0.0439967357579942 1 PR[YK]PPP 7 4 44.384 0.0 0.0 4.3962 0.0 0.0 156.10161025215 0.0 156.10161025215 0.0 16.632453958032166 0.0 0.0 0 1.8193415193665468 0.0 0.0 0.5 PR[YK]PPP 4.3962 - 238 1 2.308 115570.9 0.6200000047683716 382 2741 3124 DOHH2_400M_050219_1,3125 DOHH2_400M_050219_1,3125,PRRPPPPPP True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3126 14.635 800.0 120530.0 25 0 40906.0 + 39781 VEPYNEVK 8 85 489.2507883640802 0 489.2528259158134 PEAK CID FTMS 0 0 0 3124 71781.8359375 0.9454244116303951 -4 0.1187925338745117 2 Unmodified _VEPYNEVK_ REV__ENSG00000130227|ENST00000252512|XPO7 18.13498045792455 0.4501116112875982 1 Y 1 -1 1.9897 0.0 0.0 0.20376 0.0 0.0 505.2531503592167 305.1511324518188 810.4042828110355 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.20376 + + 28 + 1 2.308 81123.7 0.6100000143051147 383 2741 3124 DOHH2_400M_050219_1,3126 DOHH2_400M_050219_1,3126,VEPYNEVK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3128 14.639 111.0 131270.0 25 0 8016.3 + 27097 PFHKRTFS 8 44 510.2750951901194 1018.5356374470388 2 510.2756225466728 MULTI CID FTMS 0 0 0 3127 775457.6875 1.0 0 0.0 1 Unmodified _PFHKRTFS_ REV__ENSG00000176302|ENST00000317011|FOXR1 2.059750862983233 0.8118298629782807 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.308 16701.7 1.0 384 2742 3127 DOHH2_400M_050219_1,3128 DOHH2_400M_050219_1,3128,PFHKRTFS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3129 14.643 167.0 294350.0 25 0 30468.0 + 2707 ATESSNQEY 9 89 514.7121716292614 0 514.7121459841728 PEAK CID FTMS 0 0 0 3127 316602.15625 0.5424301811682621 3 -0.0984354019165039 2 Unmodified _ATESSNQEY_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 15.847184025352805 0.2451986057151378 1 EN 2 7 7.9588 0.0 0.0 0.77465 0.0 0.0 327.1338026317665 454.1590670221313 781.2928696538978 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EN 0.77465 - 131 + 1 2.308 44517.2 1.0 385 2742 3127 DOHH2_400M_050219_1,3129 DOHH2_400M_050219_1,3129,ATESSNQEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3130 14.657 800.0 150160.0 25 0 16442.0 + 17514 KPIPKNFG 8 124 450.76678418098805 0 450.7665283083916 PEAK CID FTMS 0 0 0 3127 113257.21875 0.8387918834005473 2 -0.0661869049072265 3 Unmodified _KPIPKNFG_ REV__ENSG00000132518|ENST00000254854|GUCY2D;REV__ENST00000574510.1_1_17:7919510-7919845:+|nuORF 12.531546534597751 0.5131024102181418 1 PT 2 -1 14.508 0.0 0.0 1.6129 0.0 0.0 128.0936437610871 570.3017061822874 698.3953499433744 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 PT 1.6129 - 67 + 1 2.308 99097.1 0.6700000166893005 386 2742 3127 DOHH2_400M_050219_1,3130 DOHH2_400M_050219_1,3130,KPIPKNFG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3131 14.67 800.0 131740.0 25 0 19737.0 + 8502 ETDRGMSAEY 10 126 587.7375399409059 1173.4605269486117 2 587.7382079958916 MULTI CID FTMS 0 0 0 3127 81012.8671875 0.4781670793860919 -3 0.0824947357177734 4 Oxidation (M) _ETDRGM(Oxidation (M))SAEY_ ENSG00000100347|ENST00000350028|SAMM50 45.69961567697781 0.105390671673896 1 SAEY 4 6 46.216 0.0 0.0 3.9385 0.0 0.0 705.2776966779312 0.0 705.2776966779312 0.0 29.55591267411001 0.0 0.0 0 0.8807196863200843 0.0 1.174742501084005 0.0 + SAEY 3.9385 + + 523 1 2.308 84314.3 0.6399999856948853 387 2742 3127 DOHH2_400M_050219_1,3131 DOHH2_400M_050219_1,3131,ETDRGMSAEY True False ETDRGMSAEY 14.6704 587.738207995892 1288922.625 3127.0 ENSG00000100347|ENST00000350028|SAMM50 4.657593806584676 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3133 14.688 800.0 388890.0 25 0 95031.0 + 19169 LEEAGFHNR 9 122 536.7606725824362 1071.5067922316723 2 536.7613403201103 MULTI CID FTMS 0 0 0 3132 188061.71875 0.7204222232863265 7 -0.1867952346801757 1 Unmodified _LEEAGFHNR_ REV__ENSG00000169306|ENST00000378993|IL1RAPL1 8.155526934196011 0.6299788542272896 1 {[NV]|[RG]}[YC(Carbamidomethyl (C))]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KN 8 -1 {[NV]|[RG]}[YC(Carbamidomethyl (C))]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K + + 15.485 -8.1702 -0.86967 1.4451 1.4451 48.513 0.0 0.0 0.0 0.0 3.0102999566398125 0.0 0.0 0 0.5 0.0 0.0 0.0 {[NV]|[RG]}[YC(Carbamidomethyl (C))]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KN 1.4451 - 103 + 1 2.267 236867.1 0.7900000214576721 388 2743 3132 DOHH2_400M_050219_1,3133 DOHH2_400M_050219_1,3133,LEEAGFHNR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3134 14.701 800.0 272830.0 25 0 29265.0 + 37372 TKTHIDKK 8 141 485.7866679502132 0 485.7855407595634 PEAK CID FTMS 0 0 0 3132 73001.1171875 1.0 0 0.0 2 Unmodified _TKTHIDKK_ REV__chr3:109647655-109648024|10|13.1|0.0|20.32|+|0|TE_info:L1PA7,L1PA7_dup2442,L1,LINE,acceptor,+,109648024,109653403|LINC01205,None|15 49.93300154707207 0.1072524555144024 1 ETAP{I|L}TT 7 -1 44.376 0.0 0.0 4.577 0.0 0.0 128.09196816697585 125.07259546451408 253.1645636314899 0.0 0.0 0.0 0.0 0 1.6989700043360187 0.0 1.4947026752325154 0.0 ETAP{I|L}TT 4.577 - 426 + 1 2.267 168031.4 0.6399999856948853 389 2743 3132 DOHH2_400M_050219_1,3134 DOHH2_400M_050219_1,3134,TKTHIDKK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3136 14.72 800.0 97513.0 25 0 6492.7 + 29858 QQSISDAEQR 10 100 581.2784087984014 1160.5422646636027 2 581.7806274294853 MULTI CID FTMS 0 0 0 3135 174568.25 1.0 0 0.0 1 Unmodified _QQSISDAEQR_ CON__P04264;ENSG00000167768|ENST00000252244|KRT1 35.61225514009592 0.2039006631696762 1 QQS{I|L}SDAEQR 10 0 + 62.687 0.0 0.0 5.4016 5.4016 84.912 0.0 0.0 0.0 43.64638779968488 13.750612633917 13.750612633917 9.164539485499256 0 0.3054621874040891 0.0 0.3494850021680094 0.7544321917401079 + + QQS{I|L}SDAEQR;QQS{I|L}SDAE[AG]R;{[TV]|[{I|L}S]}[KC]ADS{I|L}S[HT];[YR]HSWEQR;[AG][R{M(Oxidation (M))|F}]WS{I|L}S[HT];[NP]D[YK]S{I|L}S[HT];[YR]HSWE[AG]R;QQ{[WT]|[RM]}DAEQR;[NP][YK]DS{I|L}S[HT];YY[YK]S{I|L}S[HT] 5.4016;4.6119;3.9674;3.7579;3.372;3.061;2.9598;2.901;2.7291;2.5786 +;-;-;-;-;-;-;-;-;- + 355 + 1 2.267 63142.5 0.8299999833106995 390 2744 3135 DOHH2_400M_050219_1,3136 DOHH2_400M_050219_1,3136,QQSISDAEQR False True QQSISDAEQR 14.719718 581.780627429485 923980.9375 3135.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 5.050637165705363 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 3137 14.734 800.0 31197.0 25 0 5633.3 + -1 RKMRLFWACW 10 42 735.3669921755791 0 735.3669921755791 PEAK CID FTMS 0 0 0 -1 0 2 Carbamidomethyl (C),Oxidation (M) _RKM(Oxidation (M))RLFWAC(Carbamidomethyl (C))W_ REV__ENSG00000166664|ENST00000299847|CHRFAM7A;REV__ENSG00000175344|ENST00000306901|CHRNA7;REV__nc|ENSG00000175344|P36544-2|CHRNA7 0.4007161486938917 0.3961065659209837 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 28362.6 0.5600000023841858 391 2744 3135 DOHH2_400M_050219_1,3137 DOHH2_400M_050219_1,3137,RKMRLFWACW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3139 14.738 0.54 90893000.0 25 0 15164000.0 + -1 IQRLETMK 8 60 517.7864575819211 1033.5583622306422 2 517.7873412966728 MULTI CID FTMS 0 0 0 3138 100326504.0 0.6478812402184799 4 -0.0977945327758789 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 1 KTT[{I|L}P][WP]K 8 -1 40.562 0.0 0.0 3.9245 0.0 0.0 63.99558763351008 0.0 63.99558763351008 0.0 25.7859182067184 0.0 0.0 0 0.9247425010840048 0.0 1.305462187404089 0.2396518287104437 KTT[{I|L}P][WP]K 3.9245 - 71 + 1 2.267 43025.6 1.0 392 2745 3138 DOHH2_400M_050219_1,3139 DOHH2_400M_050219_1,3139,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3140 14.752 800.0 131260.0 25 0 30900.0 + 19129 LDYDEDEDDYE 11 114 474.168182412984 1419.4827178391522 3 474.1686279177666 MULTI CID FTMS 0 0 0 3138 122082.828125 1.0 0 0.0 2 Unmodified _LDYDEDEDDYE_ REV__ENSG00000116962|ENST00000264187|NID1;REV__nc|ENSG00000116962|P14543-2|NID1 2.6312355333042263 0.8627335947654684 1 Y 1 -1 15.485 0.0 0.0 1.0909 0.0 0.0 1238.4082224551662 0.0 1238.4082224551662 0.0 -8.672137691284405 -8.672137691284405 0.0 0 0.0 0.0 0.0 0.0 Y 1.0909 + + 82 + 1 2.267 85430.9 0.6600000262260437 393 2745 3138 DOHH2_400M_050219_1,3140 DOHH2_400M_050219_1,3140,LDYDEDEDDYE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3141 14.766 800.0 126660.0 25 0 14898.0 + -1 EEMGTNMKAK 10 105 577.7611998346791 1153.5078467361582 2 577.7628661990166 MULTI CID FTMS 0 0 0 3138 96325.78125 0.8441337269068524 2 -0.0637693405151367 3 Oxidation (M) _EEM(Oxidation (M))GTNMKAK_ REV__ENSG00000132326|ENST00000254657|PER2 8.745405648335112 0.6861838735306406 1 {NN|[MP]|[D{I|L}]|[EV]}S{M(Oxidation (M))|F}N 5 -1 22.218 0.0 0.0 1.9262 0.0 0.0 0.0 574.3101290338499 574.3101290338499 8.252574989159953 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}S{M(Oxidation (M))|F}N 1.9262 - 122 + 1 2.267 77777.1 0.6200000047683716 394 2745 3138 DOHH2_400M_050219_1,3141 DOHH2_400M_050219_1,3141,EEMGTNMKAK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3143 14.783 800.0 74452.0 25 0 11269.0 + -1 GVDEMLMER 9 107 548.2426745997903 1094.4707962663806 2 548.2432739138603 MULTI CID FTMS 0 0 0 3142 28718.80078125 0.1782839866828499 6 -0.1128950119018554 1 Oxidation (M) _GVDEM(Oxidation (M))LMER_ REV__ENSG00000069275|ENST00000367142|NUCKS1;REV__nc|ENSG00000069275|Q9H1E3-2|NUCKS1 4.3292370932331545 0.7635526921153418 1 Y 1 -1 10.837 0.0 0.0 0.9902 0.0 0.0 913.3970333042696 0.0 913.3970333042696 0.0 7.738511645026849 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.9902 - 30 + 1 2.256 50704.3 0.6000000238418579 395 2746 3142 DOHH2_400M_050219_1,3143 DOHH2_400M_050219_1,3143,GVDEMLMER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3144 14.797 800.0 205820.0 25 0 24989.0 + 17580 KPTAAFHLL 9 130 499.2932074852515 996.571862037303 2 499.2936889529228 MULTI CID FTMS 0 0 0 3142 144270.796875 0.616186662696377 -6 0.1950359344482422 2 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 34.10243960390752 0.1078313939113124 1 KPTG 4 -1 39.258 0.0 0.0 3.9393 0.0 0.0 0.0 610.3323458307249 610.3323458307249 21.91122510072759 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.0 0.0 KPTG 3.9393 - 131 + 1 2.256 126060.2 0.6700000166893005 396 2746 3142 DOHH2_400M_050219_1,3144 DOHH2_400M_050219_1,3144,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3146 14.813 800.0 177630.0 25 0 24961.0 40259 VGSYTINFR 9 95 528.7766158252266 1055.538678717253 2 528.7770873904228 MULTI CID FTMS 0 0 0 3145 62492.359375 0.2374709834353237 10 -0.132847785949707 1 Unmodified _VGSYTINFR_ ENSG00000105939|ENST00000242351|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-5|ZC3HAV1 6.723162845929126 0.6799819581413107 1 Y 1 8 11.783 0.0 0.0 1.1163 0.0 0.0 874.4639697102203 0.0 874.4639697102203 0.0 0.3627533357430579 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1163 + + 48 + 1 2.256 109120.8 0.6700000166893005 397 2747 3145 DOHH2_400M_050219_1,3146 DOHH2_400M_050219_1,3146,VGSYTINFR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3147 14.827 800.0 249690.0 25 0 64362.0 + 7265 EESRPQNANY 10 120 604.2709159901982 1206.5272790471963 2 604.2708007693291 MULTI CID FTMS 0 0 0 3145 132440.921875 1.0 0 0.0 2 Unmodified _EESRPQNANY_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 96.36657018975838 0.0088773658760237 1 EERS[QP]NANY 10 2 + 55.19 0.0 0.0 4.5743 4.5743 72.698 0.0 0.0 0.0 0.5796953306403623 2.5133625491741256 0.5796953306403623 0.5796953306403623 0 1.1549471895720984 1.2218487496163564 2.4143943297944483 0.4247425010840047 EERS[QP]NANY;[{I|L}P]TCS[QP]NANY;EE[QP]{[QD]|[EN]|[WG]|[KD]|[RS]}NANY;[TP]DAN[WQ]VNY;EERS[QP]GGANY;EERS[QP]NAGGY;[{I|L}P]TCS[QP]GGANY;[{I|L}P]TCS[QP]NAGGY;[TP]DA[DC]P{I|L}VNY;[QA]NA[DC]P{I|L}VNY 4.5743;4.5262;4.0584;3.8521;3.8147;3.8147;3.7696;3.7696;3.7521;3.4223 -;-;-;-;-;-;-;-;-;- 1791 1 2.256 144172.9 0.5699999928474426 398 2747 3145 DOHH2_400M_050219_1,3147 DOHH2_400M_050219_1,3147,EESRPQNANY True True EESRPQNANY 14.827022 604.270800769329 728980.5625 3145.0 nc|ENSG00000122779|O15164-2|TRIM24;;ENSG00000122779|ENST00000343526|TRIM24 7.267947514851888 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3150 14.843 537.0 137730.0 25 0 15227.0 + 810 AESSGQKSF 9 110 470.7222239528082 939.4298949724164 2 470.7221862673759 MULTI CID FTMS 0 0 0 3149 130194.796875 0.6840253406841413 -10 0.2787246704101562 1 Unmodified _AESSGQKSF_ ENSG00000067334|ENST00000436063|DNTTIP2 24.99096001346401 0.2132109383330889 1 {[CP]|[EA]}SS{[QG]|[NA]}KS{M(Oxidation (M))|F} 9 0 + 36.374 0.0 0.0 3.8719 3.8719 84.294 0.0 0.0 0.0 13.749387366083006 12.676062401770317 12.676062401770317 21.64529359632113 0 0.75 0.0 0.0 0.0 + + {[CP]|[EA]}SS{[QG]|[NA]}KS{M(Oxidation (M))|F};{[CP]|[EA]}S[RH]{[CT]|[{M(Oxidation (M))|F}G]}H;{[CP]|[EA]}[R{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}S{M(Oxidation (M))|F} 3.8719;1.5678;1.0519 +;-;- + 190 + 1 2.256 62921.5 1.0 399 2749 3149 DOHH2_400M_050219_1,3150 DOHH2_400M_050219_1,3150,AESSGQKSF False True AESSGQKSF 14.842805 470.722186267376 1247076.25 3149.0 ENSG00000067334|ENST00000436063|DNTTIP2 5.743697007497151 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3151 14.857 800.0 128790.0 25 0 5295.7 + 26201 NQHVKSAL 8 130 448.7512224240901 895.4878919149803 2 448.7509948611259 MULTI CID FTMS 0 0 0 3149 120642.71875 1.0 0 0.0 2 Unmodified _NQHVKSAL_ ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 43.85829265575387 0.1697421968005898 1 {[QN]|[E{I|L}]|[KN]}HVKSA{I|L} 8 0 + 34.385 0.0 0.0 3.8399 3.8399 84.055 0.0 0.0 0.0 18.86378109248469 10.274786933902009 10.274786933902009 20.859146287065933 0 1.0228787452803376 0.0 0.0 0.0 + + {[QN]|[E{I|L}]|[KN]}HVKSA{I|L};{[QN]|[E{I|L}]|[KN]}HVK[TA]V 3.8399;1.5105 +;- + 81 + 1 2.256 82845.6 0.5600000023841858 400 2749 3149 DOHH2_400M_050219_1,3151 DOHH2_400M_050219_1,3151,NQHVKSAL False True NQHVKSAL 14.856619 448.750994861126 476116.90625 3149.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B 6.121964772542317 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3153 14.874 800.0 102100.0 25 0 5413.0 -1 MVFQALAQY 9 111 543.7694742128758 1085.5243954925515 2 543.7703735232353 MULTI CID FTMS 0 0 0 3152 49600.23046875 0.0855799700989114 7 -0.0730342864990234 1 Oxidation (M) _M(Oxidation (M))VFQALAQY_ CON__Q2UVX4;ENSG00000125730|ENST00000245907|C3 23.1484247019978 0.2366544122328345 1 [{M(Oxidation (M))|F}V]KPAPHQY 9 -1 + 55.346 0.0 0.0 5.0986 5.0986 84.685 0.0 0.0 0.0 3.2568864632742844 44.63283468773298 3.2568864632742844 9.208187539523747 0 1.1549471895720984 0.0 0.0 0.5994850021680094 [{M(Oxidation (M))|F}V]KPAPHQY;[{M(Oxidation (M))|F}V]KPAPH[AG]Y;YE[PG]PAPK{NN|[MP]|[D{I|L}]|[EV]};Y[WP]PAPK{NN|[MP]|[D{I|L}]|[EV]};YY[C(Carbamidomethyl (C))K]PK{NN|[MP]|[D{I|L}]|[EV]} 5.0986;4.2503;3.7362;2.5599;1.3415 -;-;-;-;- 117 1 2.256 65385.5 0.5 401 2750 3152 DOHH2_400M_050219_1,3153 DOHH2_400M_050219_1,3153,MVFQALAQY False False False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 3156 14.889 441.0 164120.0 25 0 12794.0 + 17755 KQEPSDSFR 9 98 547.2671956790737 1092.5198384249472 2 547.2667724490166 MULTI CID FTMS 0 0 0 3155 197071.0 0.1625603852530424 -19 0.4803695678710937 1 Unmodified _KQEPSDSFR_ REV__ENSG00000244607|ENST00000310232|CCDC13 20.453626601364224 0.2830276176381075 1 [KQ]EYSSSKH 9 -1 [KQ]E + + 37.414 12.918 3.3537 3.4246 3.4246 51.52 0.0 0.0 0.0 0.0 5.581597033474424 0.0 0.0 0 0.3252574989159953 0.0 0.3807196863200844 0.0 [KQ]EYSSSKH 3.4246 - 329 + 1 2.256 64516.2 1.0 402 2752 3155 DOHH2_400M_050219_1,3156 DOHH2_400M_050219_1,3156,KQEPSDSFR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3160 14.913 800.0 132840.0 25 0 26290.0 + 28304 PRRPPPPPP 9 100 505.7986605846251 1009.5827682360502 2 505.7986938357353 MULTI CID FTMS 0 0 0 3159 83359.3046875 0.3852174501991399 17 -0.1516704559326172 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 48.345845343767074 0.0439967357579942 1 PR[YK]PPP 7 4 41.672 0.0 0.0 4.1277 0.0 0.0 156.10118300605626 0.0 156.10118300605626 0.0 32.06814291029729 0.0 0.0 0 1.9545391030138068 0.0 0.0 0.4247425010840047 PR[YK]PPP 4.1277 - 101 1 2.256 86340.6 0.4799999892711639 403 2755 3159 DOHH2_400M_050219_1,3160 DOHH2_400M_050219_1,3160,PRRPPPPPP True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3162 14.93 800.0 74487.0 25 0 15227.0 -1 ETDRGMSAEY 10 91 587.7375399409059 1173.4605269486117 2 587.7383300662041 MULTI CID FTMS 0 0 0 3161 82054.4140625 0.4843146636471178 11 -0.1032819747924804 1 Oxidation (M) _ETDRGM(Oxidation (M))SAEY_ ENSG00000100347|ENST00000350028|SAMM50 29.84058131909904 0.2982332456971691 1 SAEY 4 -1 35.152 0.0 0.0 2.9955 0.0 0.0 705.2768421857437 0.0 705.2768421857437 0.0 23.46910013008056 0.0 0.0 0 0.5 0.0 0.75 0.0 SAEY 2.9955 + + 145 1 2.256 50190.2 0.4600000083446502 404 2756 3161 DOHH2_400M_050219_1,3162 DOHH2_400M_050219_1,3162,ETDRGMSAEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3167 14.956 674.0 115450.0 25 0 14302.0 + -1 KNCIECNY 8 136 522.2170898630491 1042.419626792898 2 522.2175781130791 MULTI CID FTMS 0 0 0 3166 84370.6015625 0.8093788667655459 1 -0.0142831802368164 1 Carbamidomethyl (C) _KNC(Carbamidomethyl (C))IECNY_ REV__ENSG00000138738|ENST00000264808|PRDM5;REV__ENST00000505484.5_1_4:121652936-121737791:-|nuORF;REV__nc|ENSG00000138738|Q9NQX1-2|PRDM5;REV__nc|ENSG00000138738|Q9NQX1-4|PRDM5 19.438996006549623 0.6237395211498085 1 S[{M(Oxidation (M))|F}E]NY 5 -1 21.727 0.0 0.0 2.0843 0.0 0.0 384.1646598444698 0.0 384.1646598444698 0.0 10.30934303695183 0.0 0.0 0 0.0 0.0 0.4247425010840047 1.031234684152075 S[{M(Oxidation (M))|F}E]NY 2.0843 - 305 + 1 2.256 67715.6 1.0 405 2760 3166 DOHH2_400M_050219_1,3167 DOHH2_400M_050219_1,3167,KNCIECNY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3170 14.974 644.0 123440.0 25 0 15237.0 25806 NKQNRQEF 8 76 532.2670712935018 1062.5195896538037 2 532.2671386599541 MULTI CID FTMS 0 0 0 3169 89210.8359375 0.9060040550055136 1 -0.0138139724731445 1 Unmodified _NKQNRQEF_ ENSG00000148634|ENST00000373700|HERC4;ENST00000427635.6_1_10:69682690-69747802:-|nuORF;nc|ENSG00000148634|Q5GLZ8-3|HERC4;nc|ENSG00000148634|Q5GLZ8-6|HERC4;nc|ENSG00000148634|Q5GLZ8|HERC4 13.50788311687929 0.7113601687236069 1 Y 1 8 13.979 0.0 0.0 1.3157 0.0 0.0 881.4455978098566 0.0 881.4455978098566 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3157 - 7 + 1 2.256 66692.2 1.0 406 2762 3169 DOHH2_400M_050219_1,3170 DOHH2_400M_050219_1,3170,NKQNRQEF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3174 14.998 800.0 87406.0 25 0 3892.1 + -1 ASNVTNKTD 9 118 496.2379295864801 990.4613062397602 2 496.2391845583916 MULTI CID FTMS 0 0 0 3173 84951.28125 0.434890266813409 -9 0.0683221817016601 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNVTNKTD_ nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 32.037481411007896 0.1235546156350648 1 {[CP]|[EA]}NVTNKTD 9 -1 {[CP]|[EA]}N + + 37.01 6.9627 2.2166 3.7366 3.7366 52.401 0.0 0.0 0.0 0.0 11.603714508649844 0.0 0.0 0 0.8494850021680094 0.0 0.5941876774005248 0.0 {[CP]|[EA]}NVTNKTD 3.7366 - 484 + 1 2.256 57522.0 0.4399999976158142 407 2765 3173 DOHH2_400M_050219_1,3174 DOHH2_400M_050219_1,3174,ASNVTNKTD False False ASNVTNKTD 14.997966 496.239184558392 700401.5 3173.0 nc|ENSG00000092199|P07910-3|HNRNPC;;nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;nc|ENSG00000092199|P07910|HNRNPC 7.252892017364502 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3175 15.012 798.0 127570.0 25 0 20938.0 + 14873 ILKEVKRE 8 100 507.8190135440332 1013.6234741548664 2 507.8190185427666 MULTI CID FTMS 0 0 0 3173 94437.0390625 0.9965087399799396 1 -0.0301733016967773 2 Unmodified _ILKEVKRE_ REV__ENSG00000187790|ENST00000267430|FANCM;REV__nc|ENSG00000187790|Q8IYD8-2|FANCM;REV__nc|ENSG00000187790|Q8IYD8-3|FANCM 22.736283301280096 0.5659792798204337 1 {I|L}{I|L}KES 5 -1 63.443 0.0 0.0 6.2591 0.0 0.0 0.0 440.2511080377563 440.2511080377563 49.45886570567588 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 {I|L}{I|L}KES 6.2591 - 332 + 1 2.256 82406.3 1.0 408 2765 3173 DOHH2_400M_050219_1,3175 DOHH2_400M_050219_1,3175,ILKEVKRE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3177 15.017 5.7 10300000.0 25 0 1865200.0 + -1 IQRLETMK 8 69 517.7864575819211 1033.5583622306422 2 517.7872192263603 MULTI CID FTMS 0 0 0 3176 9915580.0 0.0640321152612429 25 -0.2115688323974609 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 1 KTT[{I|L}P][WP]K 8 -1 48.365 0.0 0.0 4.6795 0.0 0.0 63.99863093157416 0.0 63.99863093157416 0.0 33.750612633917 0.0 0.0 0 1.274227503252014 0.0 1.3494850021680094 0.2742275032520141 KTT[{I|L}P][WP]K 4.6795 - 106 + 1 2.256 49109.0 1.0 409 2766 3176 DOHH2_400M_050219_1,3177 DOHH2_400M_050219_1,3177,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3183 15.049 774.0 145340.0 25 0 38291.0 12808 GVSVQYRY 8 111 486.2522519081039 970.4899508830076 2 486.2523681521416 MULTI CID FTMS 0 0 0 3182 71323.0859375 0.4535551999281415 -21 0.176025390625 1 Unmodified _GVSVQYRY_ ENSG00000125772|ENST00000379019|GPCPD1 5.760428011301431 0.7893668129297577 1 K 1 8 11.99 0.0 0.0 1.2354 0.0 0.0 824.3843275693343 0.0 824.3843275693343 0.0 0.3553477003303396 0.0 0.0 0 0.0 0.0 0.0 0.0 K 1.2354 - 114 + 1 2.256 89537.2 1.0 410 2771 3182 DOHH2_400M_050219_1,3183 DOHH2_400M_050219_1,3183,GVSVQYRY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3187 15.066 373.0 327980.0 25 0 44703.0 + 14380 IFDPKHKKL 9 127 375.89650961119753 1124.667699433793 3 375.8958618044853 MULTI CID FTMS 0 0 0 3186 180581.5625 0.8719550433758632 -3 0.0240659713745117 1 Unmodified _IFDPKHKKL_ REV__ENSG00000155561|ENST00000285968|NUP205 17.44264345198275 0.3645313841742926 1 AKK{I|L} 4 -1 31.714 0.0 0.0 2.8199 0.0 0.0 666.3425160138687 0.0 666.3425160138687 0.0 21.96058736679344 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.5 AKK{I|L} 2.8199 - 192 1 2.256 102142.4 1.0 411 2774 3186 DOHH2_400M_050219_1,3187 DOHH2_400M_050219_1,3187,IFDPKHKKL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3188 15.071 246.0 564100.0 25 0 59090.0 + 7569 EIKKRGIRV 9 99 366.9086899053587 1097.704240316276 3 366.9084045290947 MULTI CID FTMS 0 0 0 3186 270856.9375 0.4159609703920468 -5 0.032022476196289 2 Unmodified _EIKKRGIRV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 30.63653989081413 0.1413794767160703 1 E{I|L}KKR 5 4 51.414 0.0 0.0 4.6838 0.0 0.0 0.0 440.2624509526296 440.2624509526296 36.736702669939135 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.4247425010840047 + E{I|L}KKR 4.6838 + + 130 + 1 2.256 115514.8 1.0 412 2774 3186 DOHH2_400M_050219_1,3188 DOHH2_400M_050219_1,3188,EIKKRGIRV False True EIKKRGIRV 15.070539 366.908404529095 2410152.0 3186.0 ENST00000460882.5_1_9:37422710-37436776:+|nuORF;;ENST00000493368.5_1_9:37422710-37428742:+|nuORF;;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;;ENSG00000137106|ENST00000318158|GRHPR 2.7036741574605307 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3189 15.074 174.0 283280.0 25 0 34866.0 + -1 SHVVVKND 8 86 470.248179663168 938.481806393136 2 470.2475768923759 MULTI CID FTMS 0 0 0 3186 201253.578125 0.4532146527885048 -5 0.032022476196289 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SHVVVKND_ ENSG00000067048|ENST00000336079|DDX3Y;ENST00000493363.1_1_Y:15016814-15021353:+|nuORF;nc|ENSG00000067048|O15523-3|DDX3Y 39.94969957227396 0.2351327405675156 1 {[YC]|[HE]}VVV[QT]Q 8 -1 + 47.95 0.0 0.0 5.1094 5.1094 86.077 0.0 0.0 0.0 10.796896906561033 35.476146931408294 10.796896906561033 10.268024924119672 0 1.174742501084005 0.0 0.3807196863200844 0.0 {[YC]|[HE]}VVV[QT]Q;{[YC]|[HE]}VVT{[QV]|[N{I|L}]|[RA]|[KV]}Q;[PG][NP]VV[QT]Q;[PG][NP]VT{[QV]|[N{I|L}]|[RA]|[KV]}Q;[KA][HQ]H[YR];[KA]{[CA]|SS}T[W{I|L}]{M(Oxidation (M))|F};[HT]RGN{[QV]|[N{I|L}]|[RA]|[KV]}Q 5.1094;4.0152;2.8163;1.7221;0.61189;0.51749;0.31339 -;-;-;-;-;-;- 186 1 2.256 44628.9 1.0 413 2774 3186 DOHH2_400M_050219_1,3189 DOHH2_400M_050219_1,3189,SHVVVKND False False SHVVVKND 15.073926 470.247576892376 1510051.375 3186.0 ENSG00000067048|ENST00000336079|DDX3Y;;ENST00000493363.1_1_Y:15016814-15021353:+|nuORF;;nc|ENSG00000067048|O15523-3|DDX3Y 8.527457555135092 2.0 True 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3190 15.087 730.0 172700.0 25 0 54754.0 + 27543 PKVQGLTGAI 10 103 492.2995577719879 0 492.3001281619072 PEAK CID FTMS 0 0 0 3186 86187.703125 0.7815017719760019 -40 0.6253585815429688 4 Unmodified _PKVQGLTGAI_ REV__ENSG00000164169|ENST00000322396|PRMT9;REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9 13.90604991867851 0.345182617568752 1 K 1 -1 8.2268 0.0 0.0 0.83726 0.0 0.0 196.12107491721943 655.3441866510374 851.4652615682569 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 K 0.83726 + + 64 + 1 2.256 101981.6 1.0 414 2774 3186 DOHH2_400M_050219_1,3190 DOHH2_400M_050219_1,3190,PKVQGLTGAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3193 15.107 800.0 109200.0 25 0 17665.0 + 45412 YTDENQHQY 9 121 599.243874338916 1196.473195744632 2 599.2435790896416 MULTI CID FTMS 0 0 0 3192 121415.328125 0.6469117476883167 -1 0.0040645599365234 1 Unmodified _YTDENQHQY_ ENSG00000164953|ENST00000453321|TMEM67 114.6490535036381 0.0036024293994099 1 YTDENQHQY 9 0 + 110.01 0.0 0.0 9.1943 9.1943 93.868 0.0 0.0 0.0 93.84397753453251 12.587418566968154 12.587418566968154 9.208187539523747 0 1.1989700043360187 2.0 0.7302046884880937 1.960409376976188 + + YTDENQHQY;YTDEN[AG]HQY;YTDEGGQHQY;YTDENQH[AG]Y;YTDENQH[SG]{M(Oxidation (M))|F};YTDEGG[AG]HQY;YTDEGGQH[AG]Y;YTDENQ[YQ]H;YTDEGGQH[SG]{M(Oxidation (M))|F};YTDEN[AG]H[AG]Y 9.1943;8.4247;8.4247;8.1065;7.8654;7.6588;7.3405;7.3346;7.0995;7.0485 +;-;-;-;-;-;-;-;-;- + 1357 + 1 2.256 68127.5 0.4399999976158142 415 2776 3192 DOHH2_400M_050219_1,3193 DOHH2_400M_050219_1,3193,YTDENQHQY True True YTDENQHQY 15.107014 599.243579089642 779841.25 3192.0 ENSG00000164953|ENST00000453321|TMEM67 11.211076736450195 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3194 15.121 800.0 135600.0 25 0 32958.0 + 7570 EIKKRGIRV 9 90 549.8588861797859 1097.7032194263718 2 549.8586913943291 MULTI CID FTMS 0 0 0 3192 96544.859375 0.9911614909920964 -2 0.0339212417602539 2 Unmodified _EIKKRGIRV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 10.823927491677226 0.5436922275383211 1 K 1 8 13.966 0.0 0.0 1.2723 0.0 0.0 951.5979165472688 0.0 951.5979165472688 0.0 3.784851643731386 0.0 0.0 0 0.0 0.0 0.0 0.1747425010840047 + K 1.2723 + + 26 + 1 2.256 86488.2 0.4600000083446502 416 2776 3192 DOHH2_400M_050219_1,3194 DOHH2_400M_050219_1,3194,EIKKRGIRV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3197 15.141 800.0 92188.0 25 0 7577.7 + 27284 PHIFDCLLSAN 11 97 615.304104546474 1228.593656159748 2 615.3043090701103 MULTI CID FTMS 0 0 0 3196 85913.34375 0.6963889237708968 -1 0.0038871765136718 1 Unmodified _PHIFDCLLSAN_ REV__ENST00000424710.5_1_7:120496852-120497216:-|nuORF 31.26834338654808 0.3580123756476716 1 DPS{[QV]|[N{I|L}]|[RA]|[KV]}PSQSAN 11 -1 83.881 0.0 0.0 6.8274 0.0 0.0 100.06414229560704 0.0 100.06414229560704 0.0 63.43549850930647 0.0 0.0 0 1.8807196863200843 0.0 3.2658715643802765 0.0 DPS{[QV]|[N{I|L}]|[RA]|[KV]}PSQSAN 6.8274 - 699 1 2.256 61765.2 0.5099999904632568 417 2778 3196 DOHH2_400M_050219_1,3197 DOHH2_400M_050219_1,3197,PHIFDCLLSAN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3199 15.146 118.0 351660.0 25 0 23456.0 -1 IDTCGRLRC 9 73 547.2671956790737 1092.5198384249472 2 547.2674438357353 MULTI CID FTMS 0 0 0 3198 377385.0 0.31129821733649 8 -0.0660791397094726 1 Carbamidomethyl (C) _IDTC(Carbamidomethyl (C))GRLRC_ ENST00000310758.8_1_7:37382260-37488293:-|nuORF;ENST00000448602.5_1_7:37382260-37488487:-|nuORF 10.823927491677226 0.5436922275383211 1 [KQ]EYSS[KS]H 9 -1 [KQ]E + + 22.396 8.4335 2.1894 2.0499 2.0499 48.925 0.0 0.0 0.0 0.0 13.96230152539461 0.0 0.0 0 0.0 0.0 0.0 0.0 [KQ]EYSS[KS]H 2.0499 - 132 + 1 2.256 44353.0 1.0 418 2779 3198 DOHH2_400M_050219_1,3199 DOHH2_400M_050219_1,3199,IDTCGRLRC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3200 15.16 800.0 94727.0 25 0 9797.0 -1 DVLMCTACVPL 11 93 590.7762177533617 1179.5378825735231 2 590.7764770388603 MULTI CID FTMS 0 0 0 3198 90735.6953125 0.9997779929460464 -3 0.0505447387695312 2 Oxidation (M) _DVLM(Oxidation (M))CTACVPL_ ENSG00000119973|ENST00000239032|PRLHR 27.628801355627647 0.4434699450731472 1 [DV]A[WY]AVDE{I|L} 10 -1 + 65.645 0.0 0.0 5.5653 5.5653 84.743 0.0 0.0 0.0 23.962097426172846 42.2729342083142 23.962097426172846 8.62756757724155 0 1.5021934810768762 2.0 0.4247425010840047 0.0 [DV]A[WY]AVDE{I|L};[DV]A[WY]AE[DV]{I|L};[DV]RRM{M(Oxidation (M))|F}DE{I|L};[DV][DP][HA]AVDE{I|L};{NN|[MP]|[D{I|L}]|[EV]}G[WY]AVDE{I|L};[VS][HC][HA]AVDE{I|L};[DV]{I|L}{M(Oxidation (M))|F}A[HA]{[MG]|[TS]}[YG];{[VA]|[{I|L}G]}D[WY]AVDE{I|L};{NN|[MP]|[D{I|L}]|[EV]}G[WY]AE[DV]{I|L};[VP]DD[HA]AVDE{I|L} 5.5653;4.8338;4.5976;4.5752;2.9354;2.8638;2.6841;2.6802;2.2039;2.2005 -;-;-;-;-;-;-;-;-;- 527 1 2.256 60379.1 0.449999988079071 419 2779 3198 DOHH2_400M_050219_1,3200 DOHH2_400M_050219_1,3200,DVLMCTACVPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3203 15.173 356.0 199720.0 25 0 22901.0 + 2003 APARPAPAA 9 92 411.2357312842757 820.4569096353515 2 411.2355224490166 MULTI CID FTMS 0 0 0 3202 130274.375 0.6231217265792183 -22 0.2266321182250976 1 Unmodified _APARPAPAA_ REV__ENSG00000125533|ENST00000612929|BHLHE23;REV__nc|ENSG00000125533|Q8NDY6|BHLHE23 21.74664581756881 0.2544899275067181 1 [PA]RAPAPAA 9 -1 + 35.626 0.0 0.0 4.3422 4.3422 86.18 0.0 0.0 0.0 14.938419519471402 19.39392244018006 14.938419519471402 25.47691990337875 0 0.5994850021680094 1.3010299956639813 0.0 0.0 [PA]RAPAPAA;[PA]{[QN]|[E{I|L}]|[KN]}[H{I|L}]AA 4.3422;1.237 -;- 47 1 2.256 59864.9 1.0 420 2781 3202 DOHH2_400M_050219_1,3203 DOHH2_400M_050219_1,3203,APARPAPAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3204 15.187 800.0 127020.0 25 0 8232.1 + 488 AEGPDHHSL 9 127 481.7210308598742 961.4275087865484 2 481.7209350466728 MULTI CID FTMS 0 0 0 3202 96400.0 0.223285504914192 -28 0.2754325866699219 2 Unmodified _AEGPDHHSL_ ENST00000345523.8_1_19:51302184-51307950:-|nuORF;ENST00000593287.5_1_19:51302549-51307836:-|nuORF;ENST00000595794.5_1_19:51302184-51305576:-|nuORF 68.08070601005525 0.0218408846571049 1 AEGPDHHS{I|L} 9 0 + 78.879 0.0 0.0 8.2044 8.2044 87.58 0.0 0.0 0.0 34.973024840566474 4.202164033831906 4.202164033831906 4.202164033831906 0 0.7742275032520141 2.0 1.4361818737241734 0.0 + + AEGPDHHS{I|L};AEGPDHHTV;AEG[WY]HS{I|L};AEGPDH{[TV]|[{I|L}S]}H;AEG[WY]HTV;AE[{M(Oxidation (M))|F}V]C(Carbamidomethyl (C))HS{I|L};AEG[WY]{[TV]|[{I|L}S]}H;AE[{M(Oxidation (M))|F}V]C(Carbamidomethyl (C))HTV;[PG]DHHS{I|L}EA;AEGPD[RN]G{M(Oxidation (M))|F} 8.2044;7.7673;6.9335;6.9102;6.4965;6.0262;5.6394;5.5891;5.4965;5.4938 +;-;-;-;-;-;-;-;-;- + 1007 + 1 2.256 82715.5 0.4600000083446502 421 2781 3202 DOHH2_400M_050219_1,3204 DOHH2_400M_050219_1,3204,AEGPDHHSL True True AEGPDHHSL 15.187011 481.720935046673 4968992.0 3202.0 ENST00000595794.5_1_19:51302184-51305576:-|nuORF;;ENST00000345523.8_1_19:51302184-51307950:-|nuORF;;ENST00000593287.5_1_19:51302549-51307836:-|nuORF 7.18826945622762 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3223 15.272 800.0 76040.0 25 0 6969.1 -1 0 46 628.7850681539985 2511.111166749594 4 629.0374633669853 MULTI CID FTMS 0 0 0 3222 68589.0 0.3484080103834365 -14 0.0564002990722656 1 1 D 1 -1 20.797 0.0 0.0 0.82819 0.0 0.0 1667.7469119708835 725.314780627573 2393.061692598457 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 D 0.82819 - 11 + 1 2.256 53580.4 0.3899999856948852 422 2799 3222 DOHH2_400M_050219_1,3223 DOHH2_400M_050219_1,3223, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3225 15.277 41.0 1436700.0 25 0 242220.0 + -1 IQRLETMK 8 63 517.7864575819211 1033.5583622306422 2 517.7869140505791 MULTI CID FTMS 0 0 0 3224 1445563.0 0.0093350521737899 59 -1.0066633224487305 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 1 KTT[{I|L}P][WP]K 8 -1 49.179 0.0 0.0 4.7582 0.0 0.0 63.99849245510786 0.0 63.99849245510786 0.0 33.962345622814624 0.0 0.0 0 1.6861818737241734 0.0 1.305462187404089 0.2887254899964357 KTT[{I|L}P][WP]K 4.7582 - 83 + 1 2.256 51857.9 1.0 423 2800 3224 DOHH2_400M_050219_1,3225 DOHH2_400M_050219_1,3225,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3228 15.297 800.0 218840.0 25 0 27311.0 + 5550 DMKYKNRV 8 184 351.8548894955457 1052.5428390868371 3 351.8552429080009 MULTI CID FTMS 0 0 0 3227 110177.8359375 0.9495405931890476 -2 0.0088520050048828 1 Unmodified _DMKYKNRV_ ENSG00000171703|ENST00000343484|TCEA2;ENSG00000187735|ENST00000521604|TCEA1;ENST00000395053.7_1_20:62701563-62701860:+|nuORF;ENST00000465111.5_1_20:62701563-62703530:+|nuORF;ENST00000477783.5_1_20:62701125-62703530:+|nuORF;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;nc|ENSG00000171703|Q15560-2|TCEA2;nc|ENSG00000187735|P23193-2|TCEA1 30.63653989081413 0.3996269429323407 1 DMKYKVNR 8 2 + 62.392 0.0 0.0 5.9278 5.9278 78.9 0.0 0.0 0.0 43.88731253382837 1.323675469289185 1.323675469289185 1.560314651267127 0 0.0 1.5228787452803376 0.0 1.089136830878453 DMKYKVNR;DMKYK{I|L}QQ;DMKYK[RN]V;DMKYKVGGR;DMKV[YK]NR;DMKV[YK]GGR;D[HD]{[VA]|[{I|L}G]}KVNR;[{M(Oxidation (M))|F}V][R{I|L}]W{M(Oxidation (M))|F}VS 5.9278;5.7795;5.1803;5.0478;4.7766;3.8967;0.7264;0.57984 -;-;+;-;-;-;-;- + 383 + 1 2.256 141943.3 0.9900000095367432 424 2802 3227 DOHH2_400M_050219_1,3228 DOHH2_400M_050219_1,3228,DMKYKNRV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3229 15.311 800.0 161900.0 25 0 8909.6 + 24311 MDTPLPPPGRT 11 156 394.5385903705966 1180.5939417119898 3 394.5385009646416 MULTI CID FTMS 0 0 0 3227 80033.109375 0.2779260642687735 -11 0.0574378967285156 2 Unmodified _MDTPLPPPGRT_ REV__ENSG00000164077|ENST00000296473|MON1A;REV__nc|ENSG00000164077|Q86VX9|MON1A 11.494710602746466 0.7960433852372589 1 P{I|L}{M(Oxidation (M))|F}[KS]P 6 -1 17.867 0.0 0.0 1.5134 0.0 0.0 493.2322694369128 0.0 493.2322694369128 0.0 -1.2145338483461463 -1.2145338483461463 0.0 0 0.0 0.0 1.325257498915995 0.0 P{I|L}{M(Oxidation (M))|F}[KS]P 1.5134 - 262 + 1 2.256 110666.2 0.3600000143051147 425 2802 3227 DOHH2_400M_050219_1,3229 DOHH2_400M_050219_1,3229,MDTPLPPPGRT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3232 15.331 800.0 94429.0 25 0 5920.2 + 26110 NPNGDDDDPQD 11 111 601.2157604993012 1200.4169680654022 2 601.2167846560478 MULTI CID FTMS 0 0 0 3231 152781.421875 0.3670888646882984 -3 0.0383148193359375 1 Unmodified _NPNGDDDDPQD_ REV__ENSG00000136044|ENST00000258530|APPL2;REV__nc|ENSG00000136044|Q8NEU8-2|APPL2;REV__nc|ENSG00000136044|Q8NEU8-3|APPL2 18.1463463914782 0.6576820063886638 1 PNNGY 5 -1 39.68 0.0 0.0 3.3055 0.0 0.0 637.181995996846 0.0 637.181995996846 0.0 13.657435757487477 0.0 0.0 0 0.7134679910804405 0.0 0.0 1.1505149978319906 PNNGY 3.3055 - 271 + 1 2.256 59073.4 0.5400000214576721 426 2804 3231 DOHH2_400M_050219_1,3232 DOHH2_400M_050219_1,3232,NPNGDDDDPQD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3233 15.345 800.0 151300.0 25 0 21781.0 -1 KEWSLMIMK 9 100 591.3041092230472 1180.5936655128944 2 591.3042480349541 MULTI CID FTMS 0 0 0 3231 117834.2265625 0.379023314380971 -7 0.0676517486572265 2 Oxidation (M) _KEWSLMIM(Oxidation (M))K_ ENSG00000145495|ENST00000274140|MARCHF6;ENST00000505253.1_1_5:10413496-10422048:+|nuORF;ENST00000514312.1_1_5:10415712-10417549:+|nuORF;nc|ENSG00000145495|O60337-5|MARCHF6;nc|ENSG00000145495|O60337-6|MARCHF6 20.453626601364224 0.2830276176381075 1 T{M(Oxidation (M))|F}K[HV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 8 -1 41.375 0.0 0.0 3.5046 0.0 0.0 128.09512526679845 0.0 128.09512526679845 0.0 16.576447055154517 0.0 0.0 0 0.7429928190999391 0.0 1.1549471895720984 0.0 T{M(Oxidation (M))|F}K[HV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 3.5046 - 525 1 2.256 95706.9 0.4799999892711639 427 2804 3231 DOHH2_400M_050219_1,3233 DOHH2_400M_050219_1,3233,KEWSLMIMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3234 15.359 800.0 208100.0 25 0 25458.0 -1 0 65 503.2294437805264 2511.1108365696323 5 503.4306213259697 MULTI CID FTMS 0 0 0 3231 66610.1484375 0.4508490362803937 -8 0.0715417861938476 3 1 {NN|[MP]|[D{I|L}]|[EV]}[QA]HQ{I|L}T 8 -1 34.435 0.0 0.0 1.3713 0.0 0.0 0.0 1601.6086752749636 1601.6086752749636 11.213096823718269 0.0 0.0 0.0 0 0.0 2.0 1.424742501084005 0.0 {NN|[MP]|[D{I|L}]|[EV]}[QA]HQ{I|L}T 1.3713 - 85 1 2.256 137622.7 0.9100000262260436 428 2804 3231 DOHH2_400M_050219_1,3234 DOHH2_400M_050219_1,3234, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3237 15.38 800.0 98250.0 25 0 7667.9 + -1 TQAPTCDPPTY 11 105 625.7735239064369 1249.5324948796738 2 625.7737914919853 MULTI CID FTMS 0 0 0 3236 101262.046875 0.3528037319581141 -8 0.1116743087768554 1 Carbamidomethyl (C) _TQAPTC(Carbamidomethyl (C))DPPTY_ REV__ENSG00000117411|ENST00000372324|B4GALT2;REV__nc|ENSG00000117411|O60909-2|B4GALT2;REV__nc|ENSG00000117411|O60909-3|B4GALT2 27.628801355627647 0.4434699450731472 1 [NP]{[QV]|[N{I|L}]|[RA]|[KV]}GGGD[QT]DY 12 -1 + 46.19 0.0 0.0 3.6966 3.6966 69.881 0.0 0.0 0.0 2.9147264526814567 9.08924985774086 2.9147264526814567 0.5912145211865507 0 0.4247425010840047 1.0457574905606752 0.5 1.174742501084005 [NP]{[QV]|[N{I|L}]|[RA]|[KV]}GGGD[QT]DY;[NP]{[QV]|[N{I|L}]|[RA]|[KV]}NGD[QT]DY;[QT]D[HV]QN[{M(Oxidation (M))|F}V]Y;[QT][EP]{[WT]|[RM]}YYY;[NP]{[QV]|[N{I|L}]|[RA]|[KV]}GND[QT]DY;[AG]TD[HV]QN[{M(Oxidation (M))|F}V]Y;[AG]T[EP]{[WT]|[RM]}YYY;[DP]MG[QP]V[QT]DY;[TP]DGGNQ[HV]YY;[TP]DGGNQ[HV]D[NP] 3.6966;3.6493;3.3302;3.3281;3.1674;2.8617;2.8561;2.7588;2.5772;2.4585 -;-;-;-;-;-;-;-;-;- 1132 1 2.256 62576.2 0.449999988079071 429 2806 3236 DOHH2_400M_050219_1,3237 DOHH2_400M_050219_1,3237,TQAPTCDPPTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3238 15.388 504.0 129630.0 25 0 14537.0 + 35236 SSDVSHQEY 9 107 526.2196449261628 1050.4247369191255 2 526.2187988162041 MULTI CID FTMS 0 0 0 3236 107748.9609375 0.1294297846031876 -16 0.143838882446289 2 Unmodified _SSDVSHQEY_ ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1 63.960520009940105 0.0238892913700936 1 {[CA]|SS}DVHS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y 9 2 + 49.715 0.0 0.0 4.7329 4.7329 73.954 0.0 0.0 0.0 7.147642715192504 1.2371250542002343 1.2371250542002343 1.2371250542002343 0 1.305462187404089 0.0 0.6549471895720984 0.4247425010840047 {[CA]|SS}DVHS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;{[CA]|SS}DVHS[YE]Q;{[CA]|SS}DVSH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;{[CA]|SS}DVSH[YE]Q;{[CA]|SS}DVHM[{M(Oxidation (M))|F}T]Q;{[CA]|SS}DVHS[HD][PA];{[CA]|SS}DVSH[HD][PA];[AG]HSEVD{[CA]|SS}Y;[HS]QEVD{[CA]|SS}Y;[AG]HSVED{[CA]|SS}Y 4.7329;4.6151;4.5652;4.4475;4.4165;2.5296;2.362;2.1979;2.1455;2.1225 -;-;+;-;-;-;-;-;-;- + 921 + 1 2.256 55058.3 1.0 430 2806 3236 DOHH2_400M_050219_1,3238 DOHH2_400M_050219_1,3238,SSDVSHQEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3243 15.417 800.0 142360.0 25 0 31498.0 + 26099 NPKESSSSL 9 122 474.73518438034193 0 474.7351867556572 PEAK CID FTMS 0 0 0 3242 101310.96875 0.9290926386278682 1 -0.0163536071777343 1 Unmodified _NPKESSSSL_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 47.74868867922204 0.0378261468855112 1 SS 2 7 18.711 0.0 0.0 1.9749 0.0 0.0 642.2987856534589 128.07174097232658 770.3705266257855 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 + SS 1.9749 + + 188 + 1 2.256 93909.4 0.4699999988079071 431 2810 3242 DOHH2_400M_050219_1,3243 DOHH2_400M_050219_1,3243,NPKESSSSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3246 15.428 139.0 343220.0 25 0 33072.0 + 489 AEGPDHHSL 9 76 481.7210308598742 961.4275087865484 2 481.7208129763603 MULTI CID FTMS 0 0 0 3245 327161.125 0.7577835786713701 3 -0.0579395294189453 1 Unmodified _AEGPDHHSL_ ENST00000345523.8_1_19:51302184-51307950:-|nuORF;ENST00000593287.5_1_19:51302549-51307836:-|nuORF;ENST00000595794.5_1_19:51302184-51305576:-|nuORF 52.268347100219714 0.0353964759249114 1 [PG]DHHS{I|L}EA 9 4 + 48.822 0.0 0.0 5.078 5.078 87.869 0.0 0.0 0.0 11.974500432065902 12.384346537884348 11.974500432065902 18.63913902615902 0 0.0 0.721246399047171 0.3807196863200844 0.0 [PG]DHHS{I|L}EA;[WE]{NN|[MP]|[D{I|L}]|[EV]}S{I|L}EA;{[DA]|[EG]}[HT][YR]EA;[TA][HD][YR]EA;{[CP]|[EA]}[HS][YR]EA;[HS]{[CP]|[EA]}[YR]EA;{[SA]|[TG]}[WH][YV]EA;[HS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YV]EA;{[CP]|[EA]}[HS][HV][WP] 5.078;3.1393;2.8188;2.5701;2.3811;1.4471;1.1949;1.0054;0.74392 -;-;-;-;-;-;-;-;- 417 1 2.256 42361.6 1.0 432 2812 3245 DOHH2_400M_050219_1,3246 DOHH2_400M_050219_1,3246,AEGPDHHSL True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3247 15.433 310.0 193600.0 25 0 21692.0 + 2004 APARPAPAA 9 88 411.2357312842757 820.4569096353515 2 411.2359802126884 MULTI CID FTMS 0 0 0 3245 94074.84375 0.4499739804176391 9 -0.1194896697998046 2 Unmodified _APARPAPAA_ REV__ENSG00000125533|ENST00000612929|BHLHE23;REV__nc|ENSG00000125533|Q8NDY6|BHLHE23 23.1484247019978 0.2366544122328345 1 VAPAA 5 -1 25.194 0.0 0.0 3.0707 0.0 0.0 393.22313124824376 0.0 393.22313124824376 0.0 12.71977714213131 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 VAPAA 3.0707 - 27 1 2.256 50809.7 1.0 433 2812 3245 DOHH2_400M_050219_1,3247 DOHH2_400M_050219_1,3247,APARPAPAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3248 15.445 653.0 164830.0 25 0 19824.0 -1 IIPLVMEMK 9 105 553.3053086453708 1104.5960643575415 2 553.3055908083916 MULTI CID FTMS 0 0 0 3245 107564.9296875 0.3573573831565343 -19 0.1895380020141601 3 2 Oxidation (M) _IIPLVM(Oxidation (M))EM(Oxidation (M))K_ ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-2|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A 21.74664581756881 0.2544899275067181 1 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 44.6 0.0 0.0 4.0376 4.0376 82.416 0.0 0.0 0.0 0.7378621416091846 27.68832471365307 0.7378621416091846 10.484550065040274 0 1.8494850021680087 0.0 0.7742275032520141 0.0 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[{I|L}P]{[CP]|[EA]}A{M(Oxidation (M))|F}K;[KT]T[{I|L}P][RD]{M(Oxidation (M))|F}K;[KT][RD][{I|L}P]GV[YG];[C(Carbamidomethyl (C))K][{I|L}V][{I|L}P]GV[YG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]GV[YG];[KT][RD][RH][RH] 4.0376;3.0885;2.2733;2.227;2.2139;1.7381;1.2647;0.57937 -;-;-;-;-;-;-;- 314 1 2.256 85616.6 1.0 434 2812 3245 DOHH2_400M_050219_1,3248 DOHH2_400M_050219_1,3248,IIPLVMEMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3251 15.465 800.0 177290.0 25 0 77792.0 -1 0 110 472.2730783915001 471.2658019249001 1 472.2730895876884 MULTI CID FTMS 0 0 0 3250 124852.4609375 0.4206565711921839 34 -0.6079034805297852 1 1 {[QN]|[E{I|L}]|[KN]}V 3 -1 12.007 0.0 0.0 2.5478 0.0 0.0 0.0 127.03759692905948 127.03759692905948 0.8978030532459531 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}V 2.5478 - 38 1 2.256 111347.3 0.5600000023841858 435 2814 3250 DOHH2_400M_050219_1,3251 DOHH2_400M_050219_1,3251, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3252 15.479 800.0 216040.0 25 0 18711.0 3603 DAARLVMLY 9 225 351.1914760381863 0 351.1912719607353 PEAK CID FTMS 0 0 0 3250 88387.8203125 0.9406024070342066 31 -0.5473155975341797 2 Unmodified _DAARLVMLY_ ENSG00000136631|ENST00000644510|VPS45;nc|ENSG00000136631|Q9NRW7-2|VPS45 10.823927491677226 0.3028200641087142 1 E 1 9 3.0989 0.0 0.0 0.44247 0.0 0.0 350.2212370358789 218.08199487857652 568.3032319144555 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 E 0.44247 - 19 + 1 2.256 136706.7 0.7599999904632568 436 2814 3250 DOHH2_400M_050219_1,3252 DOHH2_400M_050219_1,3252,DAARLVMLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3257 15.506 734.0 140560.0 25 0 29113.0 + 2147 APYERRAM 8 100 497.25034930209534 992.4861456709908 2 497.2506896853447 MULTI CID FTMS 0 0 0 3256 116320.5078125 0.223093893707573 -8 0.0903759002685546 1 Unmodified _APYERRAM_ ENSG00000130255|ENST00000347512|RPL36 25.399314129420983 0.5099049743284904 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CP]|[EA]}[{I|L}A]KAM 9 5 + 26.589 0.0 0.0 2.6791 2.6791 74.069 0.0 0.0 0.0 5.927412123096264 10.20181229336984 5.927412123096264 6.478174818886377 0 0.4247425010840047 1.3979400086720375 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CP]|[EA]}[{I|L}A]KAM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CP]|[EA]}RRAM;[PA][YE]RRAM;[PA]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TMKAM;{[MG]|[TS]}[W{I|L}]VWAM;[SG][C(Carbamidomethyl (C))R][{I|L}A]KAM 2.6791;2.0263;1.8791;1.8236;1.1692;0.41904 -;-;+;-;-;- + 98 1 2.256 82510.3 1.0 437 2818 3256 DOHH2_400M_050219_1,3257 DOHH2_400M_050219_1,3257,APYERRAM False True APYERRAM 15.50607 497.250689685345 1879235.875 3256.0 ENSG00000130255|ENST00000347512|RPL36 3.468573013941447 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3260 15.527 800.0 124430.0 25 0 15498.0 44100 YKDATNKHS 9 93 532.2638240878658 1062.5130952425316 2 532.2667724490166 MULTI CID FTMS 0 0 0 3259 75129.3671875 0.0921249739045505 -12 0.1178274154663086 1 Unmodified _YKDATNKHS_ ENSG00000109689|ENST00000467087|STIM2;nc|ENSG00000109689|Q9P246-2|STIM2;nc|ENSG00000109689|Q9P246-3|STIM2 19.256988751693697 0.3154191944385105 1 [KS][C(Carbamidomethyl (C))R]{[HG]|PP}RY 8 8 [KS][C(Carbamidomethyl (C))R]{[HG]|PP}R + + 14.604 -9.9043 -1.1237 1.3745 1.3745 48.448 0.0 0.0 0.0 0.0 -0.0886438348021574 -0.0886438348021574 0.0 0 0.0 0.0 0.0 0.0 [KS][C(Carbamidomethyl (C))R]{[HG]|PP}RY 1.3745 - 40 + 1 2.256 80217.5 0.4399999976158142 438 2820 3259 DOHH2_400M_050219_1,3260 DOHH2_400M_050219_1,3260,YKDATNKHS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3261 15.54 800.0 119170.0 25 0 10149.0 -1 0 58 628.7850681539985 2511.111166749594 4 628.7853881716728 MULTI CID FTMS 0 0 0 3259 98297.0078125 0.6260651228259293 7 -0.1253509521484375 2 1 D 1 -1 20.485 0.0 0.0 0.81576 0.0 0.0 1667.7459092431006 725.3153250418388 2393.0612342849395 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.0 D 0.81576 - 15 + 1 2.256 77060.4 0.449999988079071 439 2820 3259 DOHH2_400M_050219_1,3261 DOHH2_400M_050219_1,3261, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3263 15.545 7.6 7718500.0 25 0 1340100.0 -1 TATRPITKM 9 64 517.7866459655824 1033.5587389979646 2 517.7870971560478 MULTI CID FTMS 0 0 0 3262 7211405.0 0.9701907439099262 2 -0.024693489074707 1 Oxidation (M) _TATRPITKM(Oxidation (M))_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 14.40537977576856 0.4467465336100671 1 KTT[{I|L}P][WP]K 8 -1 45.637 0.0 0.0 4.4155 0.0 0.0 63.998321716615074 0.0 63.998321716615074 0.0 31.17265099260453 0.0 0.0 0 1.2302046884880935 0.0 1.3494850021680094 0.2215141619232908 KTT[{I|L}P][WP]K 4.4155 - 70 + 1 2.256 49295.4 1.0 440 2821 3262 DOHH2_400M_050219_1,3263 DOHH2_400M_050219_1,3263,TATRPITKM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3264 15.559 800.0 103260.0 25 0 11106.0 + 16631 KEIEDRQKL 9 89 579.8277695051719 1157.6409860771437 2 579.8281127810478 MULTI CID FTMS 0 0 0 3262 79883.3203125 0.2661405610941361 -7 0.0917186737060546 2 Unmodified _KEIEDRQKL_ ENSG00000132467|ENST00000254803|UTP3 71.70789743142352 0.0204387454931768 1 KE{I|L}ED 5 4 59.196 0.0 0.0 5.1135 0.0 0.0 0.0 540.3260779864056 540.3260779864056 19.96552928878592 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.7742275032520141 0.0 + KE{I|L}ED 5.1135 + + 188 + 1 2.256 64341.5 0.449999988079071 441 2821 3262 DOHH2_400M_050219_1,3264 DOHH2_400M_050219_1,3264,KEIEDRQKL True True KEIEDRQKL 15.559369 579.828112781048 4791534.25 3262.0 ENSG00000132467|ENST00000254803|UTP3 4.421125888824463 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3266 15.565 158.0 322160.0 25 0 23482.0 + -1 HYLLLMTMK 9 94 394.5385903705966 1180.5939417119898 3 394.5386535525322 MULTI CID FTMS 0 0 0 3265 191500.34375 0.6650114841243443 9 -0.1502799987792968 1 2 Oxidation (M) _HYLLLM(Oxidation (M))TM(Oxidation (M))K_ REV__ENSG00000137497|ENST00000393695|NUMA1;REV__ENST00000534971.1_1_11:71733276-71735881:-|nuORF;REV__ENST00000534987.5_1_11:71728600-71747007:-|nuORF;REV__nc|ENSG00000137497|Q14980-2|NUMA1;REV__nc|ENSG00000137497|Q14980-3|NUMA1;REV__nc|ENSG00000137497|Q14980-4|NUMA1;REV__nc|ENSG00000137497|Q14980-5|NUMA1 12.174745833636583 0.5071271664557081 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP + + 26.255 13.913 2.6437 2.2239 2.2239 49.098 0.0 0.0 0.0 0.0 0.0649873629158293 0.0 0.0 0 0.3252574989159953 0.0 0.6505149978319906 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 2.2239 - 260 + 1 2.256 50843.8 1.0 442 2822 3265 DOHH2_400M_050219_1,3266 DOHH2_400M_050219_1,3266,HYLLLMTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3270 15.589 800.0 55756.0 25 0 3584.3 -1 DPDRCESCY 9 91 601.2157604993012 1200.4169680654022 2 601.2165405154228 MULTI CID FTMS 0 0 0 3269 75486.7109375 0.1813723859683161 18 -0.4042024612426758 1 2 Carbamidomethyl (C) _DPDRC(Carbamidomethyl (C))ESC(Carbamidomethyl (C))Y_ ENSG00000125991|ENST00000348547|ERGIC3;ENST00000489071.5_1_20:34135089-34136623:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3 18.13498045792455 0.3457906370836843 1 GY 2 -1 17.959 0.0 0.0 1.496 0.0 0.0 962.321873316182 0.0 962.321873316182 0.0 -0.6411183809906866 -0.6411183809906866 0.0 0 0.0 0.0 0.0 0.0 GY 1.496 - 131 + 1 2.256 36809.6 0.5199999809265137 443 2825 3269 DOHH2_400M_050219_1,3270 DOHH2_400M_050219_1,3270,DPDRCESCY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3271 15.603 800.0 155910.0 25 0 22135.0 + 32844 SEGYPGKRY 9 106 528.7590358986594 1055.5035188641186 2 528.7584716677666 MULTI CID FTMS 0 0 0 3269 86715.8671875 0.3589751791135476 -5 0.0628662109375 2 Unmodified _SEGYPGKRY_ ENSG00000182199|ENST00000328923|SHMT2;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 39.957323273325 0.0756908302845263 1 {[ES]|[DT]|[{I|L}C]}GYY 5 4 30.713 0.0 0.0 2.9098 0.0 0.0 0.0 453.2581881158813 453.2581881158813 13.50202788747808 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}GYY 2.9098 - 91 + 1 2.256 99939.2 0.4399999976158142 444 2825 3269 DOHH2_400M_050219_1,3271 DOHH2_400M_050219_1,3271,SEGYPGKRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3272 15.617 800.0 93609.0 25 0 10595.0 -1 EKKLQNTMK 9 95 568.3104220273402 1134.6062911214804 2 568.3113891482353 MULTI CID FTMS 0 0 0 3269 81768.9453125 0.1368652344618368 -39 0.3697996139526367 3 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 32.78568957990786 0.1150597335874693 1 TT{M(Oxidation (M))|F}K 4 -1 55.477 0.0 0.0 4.8896 0.0 0.0 639.3706532209 0.0 639.3706532209 0.0 36.59833776850327 0.0 0.0 0 1.5044321917401078 0.0 0.8494850021680094 0.0 TT{M(Oxidation (M))|F}K 4.8896 - 222 1 2.256 63059.1 0.4399999976158142 445 2825 3269 DOHH2_400M_050219_1,3272 DOHH2_400M_050219_1,3272,EKKLQNTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3274 15.629 448.0 212150.0 25 0 27669.0 + -1 KRRWNMMK 8 92 591.3041092230472 1180.5936655128944 2 591.3046752810478 MULTI CID FTMS 0 0 0 3273 198869.828125 0.6396808769846807 15 -0.3144922256469726 1 2 Oxidation (M) _KRRWNM(Oxidation (M))M(Oxidation (M))K_ REV__ENST00000344293.5_1_10:7866412-8006047:+|nuORF 16.942295170755138 0.6606234159769251 1 [KT][PS]VVE{M(Oxidation (M))|F}{M(Oxidation (M))|F}K 10 -1 [KT][PS]VVE + + 29.909 -4.9219 -0.66474 2.5334 2.5334 49.559 0.0 0.0 0.0 0.0 12.914478256039668 0.0 0.0 0 1.0 0.0 0.0 0.2742275032520141 [KT][PS]VVE{M(Oxidation (M))|F}{M(Oxidation (M))|F}K 2.5334 - 211 + 1 2.256 73740.0 1.0 446 2826 3273 DOHH2_400M_050219_1,3274 DOHH2_400M_050219_1,3274,KRRWNMMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3275 15.63 57.0 1104500.0 25 0 186180.0 + 16632 KEIEDRQKL 9 96 386.8877889513034 1157.6415374541102 3 386.8872558474541 MULTI CID FTMS 0 0 0 3273 849039.1875 0.8694323759522418 -1 0.0440311431884765 2 Unmodified _KEIEDRQKL_ ENSG00000132467|ENST00000254803|UTP3 43.77239144664712 0.0547478964384323 1 {[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}E{I|L}E{I|L}K 9 6 + 50.784 0.0 0.0 4.3869 4.3869 78.443 0.0 0.0 0.0 12.508243131830229 10.215299873086607 10.215299873086607 6.020599913279625 0 0.2887254899964357 2.0 0.3252574989159953 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}E{I|L}E{I|L}K;{[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}NKE{I|L}K;K{I|L}EED{I|L}[W{I|L}]{I|L};{[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}GGKE{I|L}K;K{I|L}{M(Oxidation (M))|F}KN[HM]K{I|L};KE{I|L}ED{I|L}[W{I|L}]{I|L};K{I|L}{M(Oxidation (M))|F}{I|L}E[TP][TP]{I|L};K{I|L}{M(Oxidation (M))|F}KN[TP][TP]{I|L};{I|L}K{M(Oxidation (M))|F}KN[HM]K{I|L};[AG][RK]DE{I|L}E{I|L}K 4.3869;3.8668;3.1505;3.0714;2.878;2.8707;2.8567;2.6385;2.4658;2.4255 -;-;-;-;-;-;-;-;-;- 377 1 2.256 55599.3 1.0 447 2826 3273 DOHH2_400M_050219_1,3275 DOHH2_400M_050219_1,3275,KEIEDRQKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3276 15.633 107.0 568960.0 25 0 57005.0 + 30482 REEDGHTHQW 10 88 432.1903935120506 1293.5493511363518 3 432.1902648806572 MULTI CID FTMS 0 0 0 3273 381504.84375 0.9910942286623768 -1 0.0440311431884765 3 Unmodified _REEDGHTHQW_ ENSG00000127337|ENST00000247843|YEATS4;ENST00000552949.1_1_12:69753653-69756720:+|nuORF 21.59015148037692 0.4836074274810599 1 GHTHQW 6 4 35.851 0.0 0.0 2.7716 0.0 0.0 529.2128393887714 0.0 529.2128393887714 0.0 22.35653769445157 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 + GHTHQW 2.7716 + + 317 1 2.256 52752.5 1.0 448 2826 3273 DOHH2_400M_050219_1,3276 DOHH2_400M_050219_1,3276,REEDGHTHQW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3277 15.635 147.0 435640.0 25 0 42603.0 + 414 AEEKEDGRRW 10 65 425.8743365992208 1274.6011803978624 3 425.8740417361259 MULTI CID FTMS 0 0 0 3273 292452.25 0.7292644486706089 -4 0.0576467514038085 4 Unmodified _AEEKEDGRRW_ ENSG00000140299|ENST00000607373|BNIP2;ENST00000560458.5_1_15:59970098-59981480:-|nuORF;nc|ENSG00000140299|Q12982-2|BNIP2 23.78978130925829 0.4341852049148378 1 AEE 3 7 56.242 0.0 0.0 4.4125 0.0 0.0 0.0 942.4528585025012 942.4528585025012 27.166447222260924 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.9247425010840048 0.0 + AEE 4.4125 + + 137 + 1 2.256 56543.2 1.0 449 2826 3273 DOHH2_400M_050219_1,3277 DOHH2_400M_050219_1,3277,AEEKEDGRRW False True AEEKEDGRRW 15.635485 425.874041736126 1784655.25 3273.0 ENST00000560458.5_1_15:59970098-59981480:-|nuORF;;nc|ENSG00000140299|Q12982-2|BNIP2;;ENSG00000140299|ENST00000607373|BNIP2 5.405905723571777 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3279 15.64 74.0 532420.0 25 0 40816.0 + 35237 SSDVSHQEY 9 70 526.2196449261628 1050.4247369191255 2 526.2200805544853 MULTI CID FTMS 0 0 0 3278 701041.875 0.8421027737956214 5 -0.1124753952026367 1 Unmodified _SSDVSHQEY_ ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1 47.594388314883695 0.0456443387682827 1 {[CA]|SS}DVSHQEY 9 0 + 53.623 0.0 0.0 5.1049 5.1049 76.746 0.0 0.0 0.0 7.147642715192504 2.218487496163561 2.218487496163561 2.218487496163561 0 1.6237125054200234 0.0 0.3807196863200844 0.4247425010840047 + + {[CA]|SS}DVSHQEY;{[CA]|SS}DVSH[YE]Q;[AG]HSVD{[CA]|SS}EY;[AG]HSVDE{[CA]|SS}Y;{[CA]|SS}DVSH[HD][PA];{[CA]|SS}DV[HD][YT]Q;{[CA]|SS}DV[HD][QT]Y;[AG]HSV{[C(Carbamidomethyl (C))E]|[WC]}EY;[HS]QVDE{[CA]|SS}Y;[HS]QVD{[CA]|SS}EY 5.1049;4.8937;3.0092;3.0092;2.8719;2.8216;2.7298;2.6739;2.5816;2.5816 +;-;-;-;-;-;-;-;-;- + 426 + 1 2.256 39451.2 1.0 450 2827 3278 DOHH2_400M_050219_1,3279 DOHH2_400M_050219_1,3279,SSDVSHQEY True True SSDVSHQEY 15.640271 526.220080554485 8874268.0 3278.0 nc|ENSG00000105856|O60381-3|HBP1;;ENSG00000105856|ENST00000222574|HBP1;;nc|ENSG00000105856|O60381-2|HBP1 10.7541774113973 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3280 15.654 800.0 110590.0 25 0 7788.5 + 30483 REEDGHTHQW 10 101 647.7814955249602 1293.5484381167205 2 647.7812988162041 MULTI CID FTMS 0 0 0 3278 98928.21875 0.9032810138754098 1 -0.018625259399414 2 Unmodified _REEDGHTHQW_ ENSG00000127337|ENST00000247843|YEATS4;ENST00000552949.1_1_12:69753653-69756720:+|nuORF 62.86856922530385 0.0290614069976636 1 [WE]VDGHTHQW 10 2 + 86.552 0.0 0.0 6.6911 6.6911 86.028 0.0 0.0 0.0 1.7647276713875897 63.74527999119044 1.7647276713875897 5.76606256887672 0 2.079689690656103 0.0 0.7134679910804405 0.3494850021680094 [WE]VDGHTHQW;{[RE]|[WV]}EDGHTHQW;[WE]VDGHTH[AG]W;{[RE]|[WV]}EDGHTH[AG]W;{[CT]|[{M(Oxidation (M))|F}G]}[HM]GGHTHQW;[AG]{[CP]|[EA]}[NS]GHTHQW;[AG]{[CP]|[EA]}[SG]GGHTHQW;[WE]P{[CA]|SS}HTHQW;{[CT]|[{M(Oxidation (M))|F}G]}QHTHGG[WM]H;[AG]HTYGHTHQ{[DA]|[EG]} 6.6911;6.2453;5.7124;5.5368;5.1897;5.1224;5.0156;4.8964;4.8648;4.8404 -;+;-;-;-;-;-;-;-;- + 2428 1 2.256 67235.5 0.4699999988079071 451 2827 3278 DOHH2_400M_050219_1,3280 DOHH2_400M_050219_1,3280,REEDGHTHQW True True REEDGHTHQW 15.65411 647.781298816204 2160654.96875 3278.0 ENST00000552949.1_1_12:69753653-69756720:+|nuORF;;ENSG00000127337|ENST00000247843|YEATS4 9.461336930592855 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3282 15.662 291.0 311870.0 25 0 48709.0 + 14612 IIGKKGESV 9 109 465.7846843305818 929.5548157279636 2 465.7845947146416 MULTI CID FTMS 0 0 0 3281 236753.21875 0.5165472531016447 -3 0.0811100006103515 1 Unmodified _IIGKKGESV_ ENSG00000169564|ENST00000303577|PCBP1;ENSG00000197111|ENST00000546463|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 27.628801355627647 0.1796483985696185 1 {I|L}{I|L}V[W{I|L}]{[WT]|[RM]} 7 7 + 54.269 0.0 0.0 5.8382 5.8382 78.266 0.0 0.0 0.0 43.01034405405982 4.117866141024038 4.117866141024038 1.3582443505363528 0 0.4247425010840047 2.0 0.8807196863200843 0.0 {I|L}{I|L}V[W{I|L}]{[WT]|[RM]};{I|L}{I|L}GK{[NV]|[RG]}{[WT]|[RM]};{I|L}{I|L}V[W{I|L}]{[CA]|SS}{I|L};{I|L}{I|L}GK{[NV]|[RG]}{[CA]|SS}{I|L};{I|L}{I|L}[R{I|L}]E{[CA]|SS}{I|L};{I|L}{I|L}V[VP][YQ]V;{I|L}{I|L}V[VP][YN]{I|L} 5.8382;5.6921;5.0628;4.9241;4.2011;3.762;3.5301 -;-;-;-;-;-;- 337 + 1 2.256 73974.3 1.0 452 2828 3281 DOHH2_400M_050219_1,3282 DOHH2_400M_050219_1,3282,IIGKKGESV False True IIGKKGESV 15.661985 465.784594714642 1603893.375 3281.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000197111|Q15366-7|PCBP2;;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 2.896446863810221 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3283 15.669 406.0 243180.0 25 0 35503.0 + 14592 IIDHHDNTY 9 115 564.2596546929449 1126.5047564526897 2 564.2604247927666 MULTI CID FTMS 0 0 0 3281 244997.34375 0.404399783231113 -4 0.0850076675415039 2 Unmodified _IIDHHDNTY_ ENSG00000196924|ENST00000369850|FLNA;nc|ENSG00000196924|P21333-2|FLNA 155.02607137521346 0.0088416533300911 1 {I|L}{I|L}DH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D 7 5 83.98 0.0 0.0 7.455 0.0 0.0 0.0 271.0944918268188 271.0944918268188 18.05006220328478 0.0 0.0 0.0 0 0.8807196863200843 2.0 1.6056270500406935 1.341129063296272 {I|L}{I|L}DH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D 7.455 - 3432 + 1 2.256 79198.3 1.0 453 2828 3281 DOHH2_400M_050219_1,3283 DOHH2_400M_050219_1,3283,IIDHHDNTY True True IIDHHDNTY 15.669248 564.260424792767 2511710.25 3281.0 ENSG00000196924|ENST00000369850|FLNA;;nc|ENSG00000196924|P21333-2|FLNA 8.44238567352295 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3286 15.69 800.0 123070.0 25 0 33085.0 + 415 AEEKEDGRRW 10 83 638.3080535917665 1274.6015542503328 2 638.3084594607353 MULTI CID FTMS 0 0 0 3285 85063.4296875 1.0 0 0.0 1 Unmodified _AEEKEDGRRW_ ENSG00000140299|ENST00000607373|BNIP2;ENST00000560458.5_1_15:59970098-59981480:-|nuORF;nc|ENSG00000140299|Q12982-2|BNIP2 24.881564428377168 0.4096545554397951 1 WC(Carbamidomethyl (C))KVD 5 8 33.778 0.0 0.0 2.65 0.0 0.0 0.0 583.2340181940061 583.2340181940061 19.07252119056723 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 WC(Carbamidomethyl (C))KVD 2.65 - 106 + 1 2.256 75082.9 0.4399999976158142 454 2830 3285 DOHH2_400M_050219_1,3286 DOHH2_400M_050219_1,3286,AEEKEDGRRW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3287 15.696 339.0 298240.0 25 0 29890.0 + 7934 ELRKRQAEL 9 114 381.55980776920944 1141.6575939078284 3 381.5595275759697 MULTI CID FTMS 0 0 0 3285 157286.046875 0.9578595565319727 -1 0.0040655136108398 2 Unmodified _ELRKRQAEL_ ENSG00000171148|ENST00000301964|TADA3;ENST00000492103.1_1_3:9822043-9829075:-|nuORF;nc|ENSG00000171148|O75528-2|TADA3 24.99096001346401 0.2132109383330889 1 E{I|L} 2 7 28.271 0.0 0.0 2.4763 0.0 0.0 881.517772812973 0.0 881.517772812973 0.0 15.796896906561033 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.0 + E{I|L} 2.4763 + + 54 1 2.256 84134.9 1.0 455 2830 3285 DOHH2_400M_050219_1,3287 DOHH2_400M_050219_1,3287,ELRKRQAEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3288 15.71 800.0 124980.0 25 0 9585.7 + 35543 STPTSFNLRP 10 110 560.2945066897638 1118.5744604463275 2 560.2950317263603 MULTI CID FTMS 0 0 0 3285 127804.296875 0.4049098319803461 -2 0.0192022323608398 3 Unmodified _STPTSFNLRP_ REV__ENSG00000178921|ENST00000314666|PFAS 20.453626601364224 0.5043500229302764 1 MSTNG{I|L}RP 8 -1 59.194 0.0 0.0 5.2919 0.0 0.0 244.1434265322668 0.0 244.1434265322668 0.0 46.09488801648581 0.0 0.0 0 0.0 0.0 0.805462187404089 0.805462187404089 MSTNG{I|L}RP 5.2919 - 532 + 1 2.256 82457.9 0.550000011920929 456 2830 3285 DOHH2_400M_050219_1,3288 DOHH2_400M_050219_1,3288,STPTSFNLRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3290 15.716 207.0 317600.0 25 0 39937.0 -1 IIPLVMEMK 9 80 553.3053086453708 1104.5960643575415 2 553.3055297732353 MULTI CID FTMS 0 0 0 3289 301001.0 1.0 0 0.0 1 2 Oxidation (M) _IIPLVM(Oxidation (M))EM(Oxidation (M))K_ ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-2|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A 21.74664581756881 0.2544899275067181 1 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 42.866 0.0 0.0 3.8807 3.8807 84.138 0.0 0.0 0.0 2.243012119929091 26.38621229653701 2.243012119929091 20.21652514092061 0 1.5 0.0 0.7742275032520141 0.0 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K;[KT][RD][{I|L}P]GV[YG];[KT]T[{I|L}P][RD]{M(Oxidation (M))|F}K;[KT][RD][RH][RH];[KT]T[PA]A{I|L}T[R{M(Oxidation (M))|F}] 3.8807;2.0504;1.8389;0.57937;0.03432 -;-;-;-;- 174 1 2.256 55695.8 1.0 457 2831 3289 DOHH2_400M_050219_1,3290 DOHH2_400M_050219_1,3290,IIPLVMEMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3291 15.73 800.0 125490.0 25 0 19118.0 + 8513 ETEDPNDNRY 10 86 626.7568918880154 1251.499230842831 2 626.7563354372978 MULTI CID FTMS 0 0 0 3289 142371.734375 0.9310883765378332 -1 0.0363521575927734 2 Unmodified _ETEDPNDNRY_ ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3 79.59630418116434 0.0173986606250113 1 [DP]E[QP]NPDE[DP] 11 7 + 85.093 0.0 0.0 6.7993 6.7993 89.083 0.0 0.0 0.0 13.266739003876792 7.367585652254192 7.367585652254192 9.128498242811006 0 0.3252574989159953 1.6989700043360187 1.6861818737241734 1.174742501084005 [DP]E[QP]NPDE[DP];[DP]E[QP]GGPDE[DP];{[ET]|[MV]}EDPNDNRY;{[ET]|[MV]}EDPNDRNY;{[ET]|[MV]}EDPNRDNY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P[QP]NPDE[DP];{[ET]|[MV]}EDPNDGGRY;{[ET]|[MV]}EDPGGDNRY;{[ET]|[MV]}EDPGGDRNY;{[ET]|[MV]}EDPNDRGGY 6.7993;6.0699;5.7392;5.6252;5.4662;5.1277;5.0069;5.0069;4.8929;4.8929 -;-;+;-;-;-;-;-;-;- + 1357 1 2.256 79000.5 0.4699999988079071 458 2831 3289 DOHH2_400M_050219_1,3291 DOHH2_400M_050219_1,3291,ETEDPNDNRY True True ETEDPNDNRY 15.729981 626.756335437298 661401.625 3289.0 nc|ENSG00000105409|P13637-2|ATP1A3;;nc|ENSG00000105409|P13637-3|ATP1A3;;ENSG00000105409|ENST00000648268|ATP1A3 9.935009320576986 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3292 15.734 220.0 294780.0 25 0 23365.0 3207 AWHKCGYGLQR 11 87 440.2192978188299 1317.6360640566895 3 440.2188293337822 MULTI CID FTMS 0 0 0 3289 152266.1875 0.3409547130543433 -2 0.0404176712036132 3 Unmodified _AWHKCGYGLQR_ ENST00000497036.5_1_22:50687618-50688730:-|nuORF 9.764250979337303 0.8290795630453686 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQMNT{M(Oxidation (M))|F}QR 10 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H + + 76.255 2.6761 0.67884 5.7873 5.7873 59.533 0.0 0.0 0.0 0.0 65.65910592266293 0.0 0.0 0 1.424742501084005 0.0 0.8252574989159953 1.77049241580378 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQMNT{M(Oxidation (M))|F}QR 5.7873 - 569 + 1 2.256 57588.9 1.0 459 2831 3289 DOHH2_400M_050219_1,3292 DOHH2_400M_050219_1,3292,AWHKCGYGLQR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3293 15.748 800.0 177940.0 25 0 22721.0 + 42278 VSQNLEEK 8 141 473.7466301450997 945.4787073569994 2 473.7459899783134 MULTI CID FTMS 0 0 0 3289 121813.0859375 0.943424624595407 -1 0.0363521575927734 4 Unmodified _VSQNLEEK_ REV__ENSG00000046651|ENST00000340096|OFD1;REV__ENST00000490265.5_1_X:13771424-13787224:+|nuORF;REV__nc|ENSG00000046651|O75665-3|OFD1 36.12702656103203 0.299085846329477 1 [VS]QVDAAEK 9 -1 + 89.196 0.0 0.0 9.434 9.434 92.217 0.0 0.0 0.0 25.6424927368726 8.48111424532155 8.48111424532155 8.48111424532155 0 0.805462187404089 2.0 0.8807196863200843 0.5501648626366046 [VS]QVDAAEK;[VS]QVDAAKE;[VS][AG]VDAAEK;[VS][AG]VDAAKE;[VS]QVDAA[SG]{I|L};[VS]Q{[RE]|[WV]}AEK;[VS]QVD[DV]GK;[VS]QVDATN{I|L};[VS]QVDATVQ;[VS]Q{[SA]|[TG]}[TP]EK 9.434;8.537;8.4601;7.563;7.5416;7.084;6.8424;6.653;6.6147;6.4354 -;-;-;-;-;-;-;-;-;- 1316 + 1 2.256 112265.2 0.5199999809265137 460 2831 3289 DOHH2_400M_050219_1,3293 DOHH2_400M_050219_1,3293,VSQNLEEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3295 15.757 346.0 358340.0 25 0 29116.0 + 32845 SEGYPGKRY 9 130 352.84172224341364 0 352.8417846560478 PEAK CID FTMS 0 0 0 3294 137110.65625 0.639636150658236 1 -0.0540904998779296 1 Unmodified _SEGYPGKRY_ ENSG00000182199|ENST00000328923|SHMT2;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 28.486842064014134 0.1241350795510704 1 C(Carbamidomethyl (C))G 2 8 7.4743 0.0 0.0 1.0622 0.0 0.0 351.5400596217898 132.0456484430297 483.5857080648195 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))G 1.0622 - 22 + 1 2.256 103737.2 1.0 461 2832 3294 DOHH2_400M_050219_1,3295 DOHH2_400M_050219_1,3295,SEGYPGKRY True True SEGYPGKRY 15.756752 352.841784656048 2681038.875 3294.0 nc|ENSG00000182199|P34897-3|SHMT2;;ENSG00000182199|ENST00000328923|SHMT2;;nc|ENSG00000182199|P34897-2|SHMT2 5.108336130777995 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3296 15.771 800.0 111290.0 25 0 31984.0 -1 0 44 1144.4458374876156 3430.315683063047 3 1145.113818347454 MULTI CID FTMS 0 0 0 3294 255330.34375 0.5050982925532572 -1 0.0382957458496093 2 1 YG 2 -1 9.464 0.0 0.0 0.27589 0.0 0.0 1693.6058558098346 1513.6157834583264 3207.221639268161 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.27589 - 8 + 1 2.256 79953.2 0.6299999952316284 462 2832 3294 DOHH2_400M_050219_1,3296 DOHH2_400M_050219_1,3296, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3297 15.774 195.0 420570.0 25 0 18423.0 + 31118 RLLQRKQM 8 100 358.21860178753 1071.63397596279 3 358.2182494997978 MULTI CID FTMS 0 0 0 3294 231632.453125 0.6353042702695568 -1 0.0382957458496093 3 Unmodified _RLLQRKQM_ ENSG00000138326|ENST00000372360|RPS24;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;ENST00000473603.1_1_11:33258589-33258820:+|nuORF;ENST00000478655.5_1_10:79793659-79797065:+|nuORF;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;nc|ENSG00000138326|P62847-3|RPS24;nc|ENSG00000138326|P62847-4|RPS24;nc|ENSG00000138326|P62847|RPS24 12.531546534597751 0.7257836412119636 1 MEKR 4 7 21.37 0.0 0.0 1.9942 0.0 0.0 0.0 524.3288668268186 524.3288668268186 4.481208714888176 0.0 0.0 0.0 0 0.242992819099939 0.0 0.0 0.4247425010840047 MEKR 1.9942 - 49 + 1 2.256 70578.3 1.0 463 2832 3294 DOHH2_400M_050219_1,3297 DOHH2_400M_050219_1,3297,RLLQRKQM False True RLLQRKQM 15.774355 358.218249499798 1521756.25 3294.0 ENST00000478655.5_1_10:79793659-79797065:+|nuORF;;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;;ENSG00000138326|ENST00000372360|RPS24;;nc|ENSG00000138326|P62847|RPS24;;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;;ENST00000473603.1_1_11:33258589-33258820:+|nuORF;;nc|ENSG00000138326|P62847-4|RPS24;;nc|ENSG00000138326|P62847-3|RPS24 3.632386843363444 3.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3298 15.788 800.0 92006.0 25 0 3654.1 -1 0 111 987.384111156909 1972.7536693806176 2 987.3829833865166 MULTI CID FTMS 0 0 0 3294 123719.5390625 0.6230620811541447 -3 0.0787134170532226 4 1 EESGGGSSGGGYGGHGAAGGGG[HD] 24 -1 + 155.78 0.0 0.0 7.8964 7.8964 82.869 0.0 0.0 0.0 3.970445548630949 1.0410062483987588 1.0410062483987588 1.0410062483987588 0 1.8169015600442573 0.0 2.768930178484529 0.0 EESGGGSSGGGYGGHGAAGGGG[HD];EESGGGSSGGGYGGHGNSSNGY;EESGGGSSGGGYGGHGNSSGGGY;EESGGGSSGGGYGGHGNSSGNY;EESGGGSSGNYGGHGAAGGGG[HD];EESGGGSSNGYGGHGAAGGGG[HD];EESGGGSSGGGYGGGHAAGGGG[HD];EESGGGSSGGGYNHGAAGGGG[HD];EESGGGSSGGGYGGHGAAGGN[HD];EESGGGSSGNYGGHGNSSNGY 7.8964;7.8436;7.8338;7.6419;7.5514;7.5514;7.5508;7.5269;7.5206;7.4995 -;-;-;-;-;-;-;-;-;- 558504 + 1 2.256 51991.9 0.449999988079071 464 2832 3294 DOHH2_400M_050219_1,3298 DOHH2_400M_050219_1,3298, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3299 15.802 800.0 136960.0 25 0 8701.8 29057 QEIRQHFSTGG 11 114 630.311367801974 1258.608182670748 2 630.3133422732353 MULTI CID FTMS 0 0 0 3294 98838.078125 0.8478668544787458 1 -0.0540904998779296 5 Unmodified _QEIRQHFSTGG_ ENSG00000175931|ENST00000319380|UBE2O 36.506200033944 0.2662161991516171 1 PSQSTN 6 8 64.131 0.0 0.0 5.0954 0.0 0.0 626.3265044213324 0.0 626.3265044213324 0.0 44.46517541959466 0.0 0.0 0 0.8494850021680094 0.0 1.75 0.0 PSQSTN 5.0954 - 174 1 2.256 85583.3 0.4799999892711639 465 2832 3294 DOHH2_400M_050219_1,3299 DOHH2_400M_050219_1,3299,QEIRQHFSTGG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3301 15.808 72.0 803150.0 25 0 83063.0 + 35474 STMSTNGIPR 10 70 532.2638240878658 1062.5130952425316 2 532.2637817263603 MULTI CID FTMS 0 0 0 3300 779224.625 0.9554991733758668 1 -0.0086002349853515 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 34.93206674587334 0.2110832994570416 1 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 10 2 + 50.234 0.0 0.0 4.7278 4.7278 73.448 0.0 0.0 0.0 7.269987279362624 0.7918124604762511 0.7918124604762511 0.7918124604762511 0 0.5 0.0 0.0 0.3807196863200844 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}RP;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}PR;{[MG]|[TS]}M[{I|L}V][YN][HV] 4.7278;4.6533;3.8653;3.7908;2.1826;2.1081;0.26832 -;+;-;-;-;-;- + 114 + 1 2.256 48969.3 1.0 466 2833 3300 DOHH2_400M_050219_1,3301 DOHH2_400M_050219_1,3301,STMSTNGIPR False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3302 15.811 152.0 464340.0 25 0 67840.0 + -1 IQRLETMK 8 84 517.7868885505621 1033.5592241679242 2 517.7870361208916 MULTI CID FTMS 0 0 0 3300 389013.3125 0.1902211055196522 -3 0.1287384033203125 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 1 T{M(Oxidation (M))|F}K 3 -1 34.425 0.0 0.0 3.3307 0.0 0.0 639.371371239993 0.0 639.371371239993 0.0 18.18250318015934 0.0 0.0 0 1.0 0.0 0.0 0.2742275032520141 T{M(Oxidation (M))|F}K 3.3307 + + 167 + 1 2.256 58224.7 1.0 467 2833 3300 DOHH2_400M_050219_1,3302 DOHH2_400M_050219_1,3302,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3304 15.817 206.0 316700.0 25 0 28047.0 28765 PWVMPSQS 8 84 466.222476959644 930.430400986088 2 466.2220947146416 MULTI CID FTMS 0 0 0 3303 191027.640625 0.8203008090374622 2 -0.055525779724121 1 Unmodified _PWVMPSQS_ ENSG00000168594|ENST00000359240|ADAM29;nc|ENSG00000168594|Q9UKF5-2|ADAM29;nc|ENSG00000168594|Q9UKF5-3|ADAM29 32.116972079565 0.368454113111938 1 {I|L}{I|L}[DG]DPS{[QS]|[NT]} 9 5 + 38.323 0.0 0.0 4.1189 4.1189 86.032 0.0 0.0 0.0 16.143937264016877 23.674771601701188 16.143937264016877 37.5100697835757 0 0.2742275032520141 2.0 0.5 0.0 {I|L}{I|L}[DG]DPS{[QS]|[NT]};[KG]Y[WY]{[QS]|[NT]} 4.1189;0.087392 -;- 60 1 2.256 57879.7 1.0 468 2834 3303 DOHH2_400M_050219_1,3304 DOHH2_400M_050219_1,3304,PWVMPSQS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3305 15.822 287.0 293520.0 25 0 24450.0 + 8405 ESEPGRGAQY 10 102 547.2492658662898 1092.4839787993794 2 547.2485229372978 MULTI CID FTMS 0 0 0 3303 263885.25 0.3420472050554914 -13 0.2703084945678711 2 Unmodified _ESEPGRGAQY_ ENSG00000112651|ENST00000388752|MRPL2;ENST00000491898.5_1_6:43023605-43023818:-|nuORF 78.7280429016045 0.0181102348768482 1 DE[NS][RV]QY 8 6 27.062 0.0 0.0 2.4771 0.0 0.0 83.03766066718906 0.0 83.03766066718906 0.0 4.434341081910333 0.0 0.0 0 0.7302046884880937 0.0 1.531234684152075 0.0 DE[NS][RV]QY 2.4771 - 341 1 2.256 67886.1 1.0 469 2834 3303 DOHH2_400M_050219_1,3305 DOHH2_400M_050219_1,3305,ESEPGRGAQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3306 15.826 212.0 487950.0 25 0 49621.0 + 26504 NVEKKIDKY 9 121 379.5487356890847 1135.624377667454 3 379.5485412478447 MULTI CID FTMS 0 0 0 3303 270883.71875 0.4051862829318949 -3 0.1009864807128906 3 Unmodified _NVEKKIDKY_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000480739.2_1_12:58068877-58069030:+|nuORF 28.23362336080872 0.1719529537093671 1 NV{[TV]|[{I|L}S]}GK{I|L}DKY 10 3 + 70.3 0.0 0.0 6.1904 6.1904 85.118 0.0 0.0 0.0 13.935752032695888 6.263797005818148 6.263797005818148 6.263797005818148 0 0.2215141619232908 1.6989700043360187 0.5 0.0 NV{[TV]|[{I|L}S]}GK{I|L}DKY;NV{[TV]|[{I|L}S]}GK{I|L}DYK;NV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}DKY;NV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}DYK;NV{[TV]|[{I|L}S]}D{I|L}[KG]KY;NV{[TV]|[{I|L}S]}D{I|L}[KG]YK;{[RE]|[WV]}KG[TA]RRY;{[RE]|[WV]}K[QT]RRY 6.1904;5.6388;5.6152;5.0636;4.3842;3.8326;0.97677;0.40632 -;-;+;-;-;-;-;- + 455 + 1 2.256 86091.2 1.0 470 2834 3303 DOHH2_400M_050219_1,3306 DOHH2_400M_050219_1,3306,NVEKKIDKY False True NVEKKIDKY 15.826388 379.548541247845 2534260.75 3303.0 ENST00000480739.2_1_12:58068877-58069030:+|nuORF;;ENSG00000142541|ENST00000391857|RPL13A 4.416816075642903 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3307 15.83 170.0 540040.0 25 0 57076.0 + 31756 RSDRREDYY 9 75 420.5301588498688 1258.5686471498063 3 420.5300475955009 MULTI CID FTMS 0 0 0 3303 251270.5 0.755180500651337 -1 0.0086002349853515 4 Unmodified _RSDRREDYY_ ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7 13.614867670302877 0.4681447649821485 1 YY 2 7 19.464 0.0 0.0 1.5465 0.0 0.0 914.4318196125 0.0 914.4318196125 0.0 0.8804562952784067 0.0 0.0 0 0.5 0.0 0.0 0.0 + YY 1.5465 + + 20 + 1 2.256 75816.0 1.0 471 2834 3303 DOHH2_400M_050219_1,3307 DOHH2_400M_050219_1,3307,RSDRREDYY False True RSDRREDYY 15.829707 420.530047595501 1691296.5 3303.0 ENSG00000187555|ENST00000344836|USP7;;nc|ENSG00000187555|Q93009-3|USP7;;ENST00000565455.5_1_16:8987857-9023250:-|nuORF 4.931562741597493 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3308 15.838 471.0 217950.0 25 0 52594.0 -1 YSSCSDGGMGW 11 113 603.7130103996102 1205.4114678660203 2 603.7133056521416 MULTI CID FTMS 0 0 0 3303 203398.21875 0.3611444397318292 -6 0.1565408706665039 5 Carbamidomethyl (C) _YSSC(Carbamidomethyl (C))SDGGMGW_ ENST00000515051.1_1_5:175956111-175956726:-|nuORF 24.020572477871973 0.5281922720044371 1 YSDVH 5 -1 69.544 0.0 0.0 5.7693 0.0 0.0 0.0 601.1381929986936 601.1381929986936 39.50643962428765 0.0 0.0 0.0 0 1.1307196863200843 1.6989700043360187 0.8494850021680094 0.0 YSDVH 5.7693 - 790 + 1 2.256 75725.5 1.0 472 2834 3303 DOHH2_400M_050219_1,3308 DOHH2_400M_050219_1,3308,YSSCSDGGMGW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3310 15.845 260.0 190860.0 25 0 16522.0 -1 SWWLRCQWCCR 11 70 820.8558076589262 1639.6970623846523 2 820.8543578982353 MULTI CID FTMS 0 0 0 3309 217168.375 0.3003308770874726 -5 0.164738655090332 1 2 Carbamidomethyl (C) _SWWLRC(Carbamidomethyl (C))QWC(Carbamidomethyl (C))CR_ ENST00000298292.12_1_14:50100549-50100927:-|nuORF 0.3070304955306653 0.8736993455979228 1 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE 14 -1 + 82.392 0.0 0.0 5.0248 5.0248 76.52 0.0 0.0 0.0 49.811763481186944 17.226890629795548 17.226890629795548 2.251649203416733 0 0.6069758080123702 0.0 1.892159058960253 0.4247425010840047 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]Q{M(Oxidation (M))|F}QNAE;[EP]APNS{[SA]|[TG]}[EP]AEQG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]Q{M(Oxidation (M))|F}QGGAE;{[CP]|[EA]}PPNS{[SA]|[TG]}[EP]AEQG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGQE;[EP]APN[MN][EP]AEQG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[EP]AEQ[QA][EP]AEQG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[CP]|[EA]}PPN[MN][EP]AEQG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.0248;4.8875;4.6182;4.4821;4.4795;4.3468;4.2811;4.2565;4.1776;4.1212 -;-;-;-;-;-;-;-;-;- 938 + 1 2.256 41946.3 1.0 473 2835 3309 DOHH2_400M_050219_1,3310 DOHH2_400M_050219_1,3310,SWWLRCQWCCR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3311 15.857 659.0 85417.0 25 0 3690.1 + 18015 KSDVTNQQY 9 105 541.7591595855758 1081.5037662379516 2 541.7592040896416 MULTI CID FTMS 0 0 0 3309 117911.1015625 0.7815372679861392 2 -0.053720474243164 2 Unmodified _KSDVTNQQY_ ENST00000497707.5_1_13:76104538-76111947:-|nuORF 61.60191391372663 0.0251951588191061 1 [KS]DVTNQQY 9 0 + 50.695 0.0 0.0 4.6875 4.6875 72.253 0.0 0.0 0.0 0.0141266290591772 14.973024840566469 0.0141266290591772 0.0141266290591772 0 0.3252574989159953 0.0 0.9143943297944483 0.9247425010840048 + + [KS]DVTNQQY;[AG]S[{I|L}T]TNQQY;{[QS]|[NT]}[{I|L}T]TNQQY;[AG]S[{I|L}T]TNQ[AG]Y;[AG]S[{I|L}T]TN[AG]QY;[KS]DVTGGQQY;[KS]DVTNQ[AG]Y;[KS]DVTN[AG]QY;[AG]S[{I|L}T]TGGQQY;{[QS]|[NT]}[{I|L}T]TNQ[AG]Y 4.6875;4.6862;4.017;3.8388;3.8388;3.836;3.836;3.836;3.3765;3.1655 +;-;-;-;-;-;-;-;-;- + 569 1 2.256 49185.2 1.0 474 2835 3309 DOHH2_400M_050219_1,3311 DOHH2_400M_050219_1,3311,KSDVTNQQY True True KSDVTNQQY 15.856918 541.759204089642 613776.0625 3309.0 ENST00000497707.5_1_13:76104538-76111947:-|nuORF 7.925710042317708 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3312 15.866 526.0 150010.0 25 0 11924.0 + 10402 FSYIDLLSSAN 11 101 615.3041573946837 1228.5937618561672 2 615.3044311404228 MULTI CID FTMS 0 0 0 3309 162900.6875 0.2743439203984959 -5 0.164738655090332 3 Unmodified _FSYIDLLSSAN_ REV__ENSG00000166197|ENST00000605788|NOLC1;REV__nc|ENSG00000166197|Q14978-2|NOLC1;REV__nc|ENSG00000166197|Q14978-3|NOLC1 41.95555342248728 0.1822715950200113 1 DP[WK]PSQSAN 10 -1 71.552 0.0 0.0 5.8239 0.0 0.0 100.06414992500156 0.0 100.06414992500156 0.0 45.43305028184122 0.0 0.0 0 1.0 0.0 2.9604093769761874 0.0 DP[WK]PSQSAN 5.8239 - 698 1 2.256 60736.6 1.0 475 2835 3309 DOHH2_400M_050219_1,3312 DOHH2_400M_050219_1,3312,FSYIDLLSSAN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3314 15.874 278.0 220140.0 25 0 21159.0 -1 EKKLQNTMK 9 94 568.3104220273402 1134.6062911214804 2 568.3110229372978 MULTI CID FTMS 0 0 0 3313 173690.046875 0.2907231944643935 -28 0.4738702774047851 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 17.11289562659939 0.3734572693229295 1 KTT 3 -1 28.416 0.0 0.0 2.5045 0.0 0.0 63.99850803383362 737.399872903481 801.3983809373146 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.8494850021680094 0.0 KTT 2.5045 - 310 + 1 2.256 46752.8 1.0 476 2836 3313 DOHH2_400M_050219_1,3314 DOHH2_400M_050219_1,3314,EKKLQNTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3315 15.878 216.0 271640.0 25 0 50278.0 + 38869 TVKAKTDL 8 69 438.2637006265899 874.5128483199799 2 438.2635375857353 MULTI CID FTMS 0 0 0 3313 233577.265625 0.617895048802687 -6 0.1928644180297851 2 Unmodified _TVKAKTDL_ ENSG00000188191|ENST00000537384|PRKAR1B 32.78568957990786 0.3549862272178655 1 {I|L}SKA[KT]D{I|L} 8 2 + 70.822 0.0 0.0 8.0985 8.0985 97.521 0.0 0.0 0.0 53.34308865449383 2.2094154625552704 2.2094154625552704 36.027040888576 0 1.110924374808178 2.0 0.75 0.4247425010840047 {I|L}SKA[KT]D{I|L};{[TV]|[{I|L}S]}KSQ{[TV]|[{I|L}S]}{I|L};{[TV]|[{I|L}S]}{[QS]|[NT]}K{[TV]|[{I|L}S]}{I|L};[KA]KSE{[TV]|[{I|L}S]}{I|L};[KA]{[ES]|[DT]|[{I|L}C]}K{[TV]|[{I|L}S]}{I|L};{[ES]|[DT]|[{I|L}C]}[KA]K{[TV]|[{I|L}S]}{I|L};{[DA]|[EG]}[KT]K{[TV]|[{I|L}S]}{I|L} 8.0985;3.9788;3.6397;1.9587;0.43671;0.3259;0.033994 -;-;-;-;-;-;- 252 + 1 2.256 52011.0 1.0 477 2836 3313 DOHH2_400M_050219_1,3315 DOHH2_400M_050219_1,3315,TVKAKTDL False True TVKAKTDL 15.877934 438.263537585735 1429866.125 3313.0 ENSG00000188191|ENST00000537384|PRKAR1B 2.7823801040649414 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3316 15.892 800.0 98191.0 25 0 5044.6 + -1 STCLRMWQGQ 10 97 633.7889702898618 1265.5633876465236 2 633.7885009646416 MULTI CID FTMS 0 0 0 3313 124503.84375 0.6537796412183194 -6 0.1928644180297851 3 Carbamidomethyl (C) _STC(Carbamidomethyl (C))LRMWQGQ_ REV__ENSG00000010256|ENST00000203407|UQCRC1;REV__ENST00000415995.5_1_3:48636563-48647036:-|nuORF;REV__ENST00000471189.5_1_3:48636563-48638429:-|nuORF;REV__ENST00000480561.5_1_3:48636882-48638270:-|nuORF 27.628801355627647 0.3479284626772844 1 [AG]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}AQQD 11 -1 47.999 0.0 0.0 3.7927 0.0 0.0 0.0 85.04088409842089 85.04088409842089 3.270925447448469 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 1.829689690656103 [AG]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}AQQD 3.7927 - 2617 1 2.256 64793.6 0.5199999809265137 478 2836 3313 DOHH2_400M_050219_1,3316 DOHH2_400M_050219_1,3316,STCLRMWQGQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3319 15.912 800.0 150010.0 25 0 9317.3 + 6037 DSDSEEPSKY 10 127 578.7356548931618 1155.4567568531236 2 578.7358276247978 MULTI CID FTMS 0 0 0 3318 157358.25 0.4608634824834473 -8 0.2225255966186523 1 Unmodified _DSDSEEPSKY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 125.0377797344192 0.000220824405701 1 {[DS]|[MA]|[CV]|TT}DSEEPSKY 10 0 {[DS]|[MA]|[CV]|TT} + + 73.129 7.5308 3.727 6.329 6.329 61.444 0.0 0.0 0.0 0.0 31.180993120779945 0.0 0.0 0 1.7474250108400469 0.0 1.6549471895720984 0.0 + + {[DS]|[MA]|[CV]|TT}DSEEPSKY 6.329 + + 570 + 1 2.256 94894.6 0.6100000143051147 479 2838 3318 DOHH2_400M_050219_1,3319 DOHH2_400M_050219_1,3319,DSDSEEPSKY True True DSDSEEPSKY 15.912209 578.735827624798 3222854.0 3318.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 10.216622352600098 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3322 15.931 731.0 237020.0 25 0 31932.0 + 42534 VTLRRADDSL 10 158 382.54799229450606 1144.6221474837182 3 382.5469238162041 MULTI CID FTMS 0 0 0 3321 113759.25 1.0 0 0.0 1 Unmodified _VTLRRADDSL_ REV__ENSG00000128591|ENST00000325888|FLNC;REV__nc|ENSG00000128591|Q14315-2|FLNC 22.774965066869 0.4569865297271528 1 RYS{I|L} 4 -1 30.679 0.0 0.0 2.6803 0.0 0.0 607.3189381104745 0.0 607.3189381104745 0.0 10.986198691406326 0.0 0.0 0 0.7887254899964358 0.0 0.5 0.0 RYS{I|L} 2.6803 - 93 + 1 2.256 136293.7 1.0 480 2840 3321 DOHH2_400M_050219_1,3322 DOHH2_400M_050219_1,3322,VTLRRADDSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3325 15.952 800.0 89210.0 25 0 8762.4 + 23390 LTDSEKGNSY 10 121 557.2564290337813 1112.4983051343625 2 557.2559081912041 MULTI CID FTMS 0 0 0 3324 91654.234375 0.905070923339995 1 -0.0416154861450195 1 Unmodified _LTDSEKGNSY_ ENSG00000116191|ENST00000367635|RALGPS2;ENST00000478871.1_1_1:178863027-178885491:+|nuORF;nc|ENSG00000116191|Q86X27-3|RALGPS2 47.594388314883695 0.0942698883389255 1 {I|L}TD{[RE]|[WV]}{[ET]|[MV]}SY 9 4 + 62.942 0.0 0.0 5.6577 5.6577 77.244 0.0 0.0 0.0 48.249256301612746 9.129712596891151 9.129712596891151 1.2055177445454746 0 0.3807196863200844 2.0 0.3807196863200844 0.8494850021680094 {I|L}TD{[RE]|[WV]}{[ET]|[MV]}SY;{I|L}TD{[ES]|[DT]|[{I|L}C]}{I|L}WSY;{I|L}TD{[ES]|[DT]|[{I|L}C]}K[NG]SY;{I|L}TD{[ES]|[DT]|[{I|L}C]}{I|L}[MT]{[CT]|[{M(Oxidation (M))|F}G]};[VP]DQQ{[ES]|[DT]|[{I|L}C]}DVP;{I|L}[W{I|L}][MD]WSY;[HM]{[ET]|[MV]}{[RE]|[WV]}DVP;[HM]W{I|L}{[ES]|[DT]|[{I|L}C]}DVP;[HM][NG]K{[ES]|[DT]|[{I|L}C]}DVP;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Y{M(Oxidation (M))|F}]{[ES]|[DT]|[{I|L}C]}DVP 5.6577;5.5494;5.4331;3.3918;1.7611;1.6112;1.5869;1.4785;1.3623;1.2181 -;-;+;-;-;-;-;-;-;- + 328 + 1 2.256 61501.3 0.4900000095367431 481 2842 3324 DOHH2_400M_050219_1,3325 DOHH2_400M_050219_1,3325,LTDSEKGNSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3326 15.966 800.0 49940.0 25 0 15286.0 -1 0 28 1171.1189532958597 3510.3350304877786 3 1171.450610339642 MULTI CID FTMS 0 0 0 3324 103159.4765625 0.790833103199953 -2 0.0193119049072265 2 1 E 1 -1 6.9897 0.0 0.0 0.19912 0.0 0.0 2854.1069118818014 524.1619356744749 3378.2688475562763 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19912 - 2 + 1 2.256 43865.3 0.3600000143051147 482 2842 3324 DOHH2_400M_050219_1,3326 DOHH2_400M_050219_1,3326, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3327 15.977 653.0 181820.0 25 0 26223.0 + + 19351 ELPKKREL 8 88 506.81141418003966 1011.6082754268792 2 506.8118469119072 MULTI CID FTMS 0 0 0 3324 85850.8828125 0.4042933728105937 -5 0.0438156127929687 3 Unmodified _LEPKLKER_ ENSG00000130749|ENST00000253048|ZC3H4 27.628801355627647 0.4629596117395134 1 E{I|L}PKK[{I|L}V]W 8 -1 + 66.459 0.0 0.0 6.5696 6.5696 81.51 0.0 0.0 0.0 52.47933455448525 4.69273760456403 4.69273760456403 2.0289375146764854 0 0.531234684152075 2.0 0.0 0.0 E{I|L}PKK[{I|L}V]W;{I|L}EPKK[{I|L}V]W 6.5696;6.369 -;- 84 + 1 2.256 95571.6 1.0 483 2842 3324 DOHH2_400M_050219_1,3327 DOHH2_400M_050219_1,3327,LEPKLKER False False ELPKKREL 15.977192 506.811846911907 857535.0625 3324.0 ENSG00000130749|ENST00000253048|ZC3H4 4.190459887186687 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3329 15.986 278.0 300380.0 25 0 35396.0 -1 IIPLVMEMK 9 106 553.3052827886369 1104.5960126440737 2 553.3052856326103 MULTI CID FTMS 0 0 0 3328 211597.40625 0.665057205619543 -12 0.2675380706787109 1 2 Oxidation (M) _IIPLVM(Oxidation (M))EM(Oxidation (M))K_ ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-2|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A 21.74664581756881 0.2544899275067181 1 T[{I|L}P]T{M(Oxidation (M))|F}K 6 -1 49.654 0.0 0.0 4.4952 0.0 0.0 399.2232838361344 0.0 399.2232838361344 0.0 33.54425638516595 0.0 0.0 0 1.5 0.0 0.7742275032520141 0.0 T[{I|L}P]T{M(Oxidation (M))|F}K 4.4952 - 330 1 2.256 67131.4 1.0 484 2843 3328 DOHH2_400M_050219_1,3329 DOHH2_400M_050219_1,3329,IIPLVMEMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3330 15.992 311.0 175790.0 25 0 16840.0 + -1 KQNMLIDGK 9 79 531.7841187568397 1061.5536845804793 2 531.7847167849541 MULTI CID FTMS 0 0 0 3328 104990.765625 0.3171579712112289 -19 0.4081001281738281 2 Oxidation (M) _KQNM(Oxidation (M))LIDGK_ REV__ENSG00000139324|ENST00000266712|TMTC3;REV__nc|ENSG00000139324|Q6ZXV5|TMTC3 10.823927491677226 0.5436922275383211 1 MSTN{[VA]|[{I|L}G]}RP 8 -1 18.29 0.0 0.0 1.723 0.0 0.0 187.12379270089883 0.0 187.12379270089883 0.0 1.9144452296359624 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 MSTN{[VA]|[{I|L}G]}RP 1.723 - 222 + 1 2.256 48509.5 1.0 485 2843 3328 DOHH2_400M_050219_1,3330 DOHH2_400M_050219_1,3330,KQNMLIDGK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3335 16.02 800.0 133910.0 25 0 15925.0 + 29492 QLKQRNTL 8 104 500.7986993699507 999.5828458067016 2 500.7986938357353 MULTI CID FTMS 0 0 0 3334 117018.65625 0.3588974060186624 -3 0.0120248794555664 1 Unmodified _QLKQRNTL_ ENSG00000007312|ENST00000006750|CD79B;ENST00000559358.1_1_17:62006588-62007812:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B;nc|ENSG00000007312|P40259-3|CD79B 29.081581746732265 0.4323690340403521 1 [Q{I|L}]KQRNT{I|L} 8 0 + 46.521 0.0 0.0 4.654 4.654 83.924 0.0 0.0 0.0 33.75651414939224 8.84343632307683 8.84343632307683 9.262137858390808 0 0.3252574989159953 1.6989700043360187 0.3807196863200844 0.4247425010840047 + + [Q{I|L}]KQRNT{I|L};[Q{I|L}]KQRGGT{I|L};[Q{I|L}]K[AG]RNT{I|L};[Q{I|L}]K{[NV]|[RG]}ANT{I|L};[Q{I|L}]KQV[KA]W;[Q{I|L}]K[AG]RGGT{I|L};[Q{I|L}]K{[NV]|[RG]}AGGT{I|L};[Q{I|L}]K[DV]{[RE]|[WV]}{I|L};[Q{I|L}]{I|L}[W{I|L}]NT{I|L};[Q{I|L}]K[AG]V[KA]W 4.654;3.7274;3.7274;3.6305;3.4445;2.8062;2.7093;2.6512;2.5989;2.5179 +;-;-;-;-;-;-;-;-;- + 236 + 1 2.256 85784.8 0.4699999988079071 486 2847 3334 DOHH2_400M_050219_1,3335 DOHH2_400M_050219_1,3335,QLKQRNTL False True QLKQRNTL 16.020252 500.798693835735 1465312.75 3334.0 chr17:63929888-63930063|14|200.36|0.08|11.36|-|2|CD79B,None|1;;nc|ENSG00000007312|P40259-3|CD79B;;ENSG00000007312|ENST00000006750|CD79B;;ENST00000559358.1_1_17:62006588-62007812:-|nuORF;;nc|ENSG00000007312|P40259-2|CD79B 1.3528294960657756 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3336 16.034 800.0 49768.0 25 0 23862.0 -1 0 29 1144.4458374876156 3430.315683063047 3 1144.777880847454 MULTI CID FTMS 0 0 0 3334 74292.9765625 0.1373829727479134 13 -0.288482666015625 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.256 39121.2 0.3199999928474426 487 2847 3334 DOHH2_400M_050219_1,3336 DOHH2_400M_050219_1,3336, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3337 16.043 485.0 164100.0 25 0 30628.0 + -1 FYDDGESPPCA 11 58 629.2402197040349 0 629.2399169802666 PEAK CID FTMS 0 0 0 3334 188664.6875 0.9619627432573802 1 -0.0526294708251953 3 Carbamidomethyl (C) _FYDDGESPPC(Carbamidomethyl (C))A_ REV__CREBBP|p.I1483F|1|0.23|ENSG00000005339|chr16:3736763-3736763|T/A|missense_variant 1.3295316138638542 0.4761840153648598 1 D 1 -1 5.4846 0.0 0.0 0.43651 0.0 0.0 734.2999451680322 404.12106848035216 1138.4210136483844 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.43651 + + 1 + 1 2.256 65961.9 1.0 488 2847 3334 DOHH2_400M_050219_1,3337 DOHH2_400M_050219_1,3337,FYDDGESPPCA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3338 16.057 800.0 159170.0 25 0 6050.7 + 39793 VERLREKEK 9 167 396.2353897937049 1185.684339981315 3 396.2355224490166 MULTI CID FTMS 0 0 0 3334 73808.984375 0.8817337009389773 1 -0.0526294708251953 4 Unmodified _VERLREKEK_ ENSG00000166963|ENST00000300231|MAP1A;nc|ENSG00000166963|P78559-2|MAP1A 9.38312468134398 0.5871240394367778 1 REV 3 7 28.984 0.0 0.0 2.4445 0.0 0.0 783.4594593732437 0.0 783.4594593732437 0.0 14.890690719683093 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.0 REV 2.4445 - 100 1 2.256 103978.5 0.7900000214576721 489 2847 3334 DOHH2_400M_050219_1,3338 DOHH2_400M_050219_1,3338,VERLREKEK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3341 16.067 209.0 415160.0 25 0 61342.0 + -1 TLIHIYMK 8 99 517.7869034190061 1033.559253904812 2 517.7870361208916 MULTI CID FTMS 0 0 0 3340 312426.71875 0.1086388844916042 -16 0.258544921875 1 Oxidation (M) _TLIHIYM(Oxidation (M))K_ REV__ENSG00000066279|ENST00000367409|ASPM 30.22481116460888 0.4082965392918993 1 KTT[{I|L}P][WP]K 8 -1 51.788 0.0 0.0 5.0107 0.0 0.0 63.99936213274572 0.0 63.99936213274572 0.0 39.150378042405904 0.0 0.0 0 1.7614393726401687 0.0 1.3494850021680094 0.3054621874040891 KTT[{I|L}P][WP]K 5.0107 - 350 + 1 2.256 70057.5 1.0 490 2849 3340 DOHH2_400M_050219_1,3341 DOHH2_400M_050219_1,3341,TLIHIYMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3342 16.071 212.0 219820.0 25 0 37757.0 + -1 KDVDGAYMT 9 75 508.22360590970527 1014.4326588862106 2 508.2238036990166 MULTI CID FTMS 0 0 0 3340 249537.078125 0.52177802245194 -4 0.0646562576293945 2 Oxidation (M) _KDVDGAYM(Oxidation (M))T_ P04264;ENSG00000167768|ENST00000252244|KRT1 29.84058131909904 0.1515068451768857 1 {[QD]|[EN]|[WG]|[KD]|[RS]}VDQY{M(Oxidation (M))|F}T 8 -1 + 31.688 0.0 0.0 3.1237 3.1237 73.806 0.0 0.0 0.0 3.940162615404077 9.60589636400207 3.940162615404077 4.854771935914002 0 0.6989700043360187 0.0 0.2302046884880938 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}VDQY{M(Oxidation (M))|F}T;[{I|L}T]QDQY{M(Oxidation (M))|F}T;{[QD]|[EN]|[WG]|[KD]|[RS]}VD[AG]Y{M(Oxidation (M))|F}T;[{I|L}T][AG]DQY{M(Oxidation (M))|F}T;[{I|L}T]QD[AG]Y{M(Oxidation (M))|F}T;[DN]{NN|[MP]|[D{I|L}]|[EV]}KY{M(Oxidation (M))|F}T;{[YC]|[HE]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[RD]W;[{I|L}T][AG]D[AG]Y{M(Oxidation (M))|F}T;[{M(Oxidation (M))|F}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[Q{I|L}]{M(Oxidation (M))|F}T;[{M(Oxidation (M))|F}T]{[QV]|[N{I|L}]|[RA]|[KV]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}T 3.1237;2.6451;2.2106;1.7321;1.7321;1.1055;0.83254;0.82434;0.80566;0.65342 -;-;+;-;-;-;-;-;-;- + 146 1 2.256 40259.6 1.0 491 2849 3340 DOHH2_400M_050219_1,3342 DOHH2_400M_050219_1,3342,KDVDGAYMT False False KDVDGAYMT 16.071128 508.223803699017 2274375.0 3340.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 6.282447497049968 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3343 16.078 380.0 193840.0 25 0 38308.0 + 10452 FTESQKTKY 9 91 377.8609904792698 1130.5611420380094 3 377.8609191775322 MULTI CID FTMS 0 0 0 3340 158896.203125 1.0 0 0.0 3 Unmodified _FTESQKTKY_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 31.26834338654808 0.1333407332142048 1 {M(Oxidation (M))|F}TE{[QS]|[NT]}KTKY 9 0 + 29.275 0.0 0.0 2.5894 2.5894 67.806 0.0 0.0 0.0 6.122731327798547 1.1092437480817807 1.1092437480817807 1.1092437480817807 0 0.5172203223519531 0.0 0.0 0.0 + + {M(Oxidation (M))|F}TE{[QS]|[NT]}KTKY;{M(Oxidation (M))|F}Y[{M(Oxidation (M))|F}T]K{I|L}E[PS];{[ET]|[MV]}T{I|L}K[{M(Oxidation (M))|F}T]YE;[KT]{[QS]|[NT]}K[{M(Oxidation (M))|F}T]YE;{[QS]|[NT]}[KT]K[{M(Oxidation (M))|F}T]YE;[{M(Oxidation (M))|F}T][VP]K[{M(Oxidation (M))|F}T]YE;[KT]K{[QS]|[NT]}[{M(Oxidation (M))|F}T]YE 2.5894;2.4913;2.0479;1.2805;1.1006;0.98114;0.62561 +;-;-;-;-;-;- + 177 + 1 2.256 64145.5 1.0 492 2849 3340 DOHH2_400M_050219_1,3343 DOHH2_400M_050219_1,3343,FTESQKTKY False True FTESQKTKY 16.077945 377.860919177532 633364.8125 3340.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94517539-94521656:-|nuORF 6.073079586029053 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3345 16.083 88.0 502180.0 25 0 57343.0 + 8406 ESEPGRGAQY 10 70 547.2492658662898 1092.4839787993794 2 547.2494384646416 MULTI CID FTMS 0 0 0 3344 628148.1875 0.8142036430419956 3 -0.078348159790039 1 Unmodified _ESEPGRGAQY_ ENSG00000112651|ENST00000388752|MRPL2;ENST00000491898.5_1_6:43023605-43023818:-|nuORF 34.40172386719151 0.2166836008404837 1 {[ES]|[DT]|[{I|L}C]}EPT 5 6 21.198 0.0 0.0 1.9403 0.0 0.0 0.0 546.2417696588499 546.2417696588499 1.4659125070036083 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}EPT 1.9403 - 120 + 1 2.256 40017.0 1.0 493 2850 3344 DOHH2_400M_050219_1,3345 DOHH2_400M_050219_1,3345,ESEPGRGAQY False True ESEPGRGAQY 16.082745 547.249438464642 21898840.5 3344.0 ENSG00000112651|ENST00000388752|MRPL2;;ENST00000491898.5_1_6:43023605-43023818:-|nuORF 8.252907594045004 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3346 16.097 800.0 66367.0 25 0 3121.0 + 7155 EENPNNNENTY 11 106 669.2658043824143 1336.5170558316286 2 669.2655517458916 MULTI CID FTMS 0 0 0 3344 99074.3828125 0.5529869311894665 -4 0.078125 2 Unmodified _EENPNNNENTY_ ENSG00000184205|ENST00000375442|TSPYL2;ENST00000556808.1_1_X:53114705-53115656:+|nuORF 26.268140514670165 0.4754186812857754 1 [NP]NNENTY 8 3 40.446 0.0 0.0 3.0262 0.0 0.0 0.0 387.1176167049286 387.1176167049286 15.5761043889461 0.0 0.0 0.0 0 0.0 0.0 0.6382104921644451 2.0743923658886185 + [NP]NNENTY 3.0262 + + 914 1 2.256 46031.8 0.449999988079071 494 2850 3344 DOHH2_400M_050219_1,3346 DOHH2_400M_050219_1,3346,EENPNNNENTY False True EENPNNNENTY 16.096912 669.265551745892 975545.1875 3344.0 ENST00000556808.1_1_X:53114705-53115656:+|nuORF;;ENSG00000184205|ENST00000375442|TSPYL2 1.7926584780216217 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3348 16.104 241.0 276530.0 25 0 21244.0 + -1 RCCWQCRLWWS 11 80 820.8558076589262 1639.6970623846523 2 820.8555786013603 MULTI CID FTMS 0 0 0 3347 319776.65625 0.4422319946155223 11 -0.2125358581542968 1 2 Carbamidomethyl (C) _RC(Carbamidomethyl (C))C(Carbamidomethyl (C))WQCRLWWS_ REV__ENST00000298292.12_1_14:50100549-50100927:-|nuORF 0.3070304955306653 0.8736993455979228 1 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE 14 -1 + 84.747 0.0 0.0 5.1684 5.1684 57.153 0.0 0.0 0.0 63.77767598819055 13.406206186877938 13.406206186877938 0.0 0 0.5924778212679485 0.0 1.841129063296272 0.4247425010840047 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GKEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GKEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGGAE;{[CP]|[EA]}PPNS{[SA]|[TG]}[EP]AEKG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[CP]|[EA]}PPNS{[SA]|[TG]}[EP]AEQG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ASS{[SA]|[TG]}NAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GKEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ASS{[SA]|[TG]}NAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]Q{M(Oxidation (M))|F}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GKE[WE]Q{M(Oxidation (M))|F}QNAE 5.1684;5.1684;4.9988;4.9988;4.8023;4.8023;4.7628;4.7628;4.7618;4.7618 -;-;-;-;-;-;-;-;-;- 5505 + 1 2.256 52554.6 1.0 495 2851 3347 DOHH2_400M_050219_1,3348 DOHH2_400M_050219_1,3348,RCCWQCRLWWS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3349 16.118 800.0 44487.0 25 0 3588.8 + 13924 HWWYRWWCVFP 11 65 555.9239117339438 1664.7499058020312 3 556.2579833865166 MULTI CID FTMS 0 0 0 3347 73115.0546875 1.0 0 0.0 2 Unmodified _HWWYRWWCVFP_ REV__ENST00000410111.7_1_2:86406577-86422494:-|nuORF 0.0948413911109767 0.8747004676205551 1 GY 2 -1 22.959 0.0 0.0 1.3791 0.0 0.0 1426.654887346756 0.0 1426.654887346756 0.0 8.354706403678875 0.0 0.0 0 0.5 0.0 0.0 0.0 GY 1.3791 - 164 + 1 2.256 32788.8 0.4199999868869781 496 2851 3347 DOHH2_400M_050219_1,3349 DOHH2_400M_050219_1,3349,HWWYRWWCVFP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3351 16.134 800.0 63657.0 25 0 4084.8 + 27285 PHIFDCLLSAN 11 85 615.3041573946837 1228.5937618561672 2 615.3051025271416 MULTI CID FTMS 0 0 0 3350 59395.265625 0.100028614211174 12 -0.2290306091308593 1 Unmodified _PHIFDCLLSAN_ REV__ENST00000424710.5_1_7:120496852-120497216:-|nuORF 24.99096001346401 0.505407273373304 1 D[PS]QSAN 7 -1 50.622 0.0 0.0 4.1203 0.0 0.0 511.2977772443375 0.0 511.2977772443375 0.0 33.632447924104554 0.0 0.0 0 0.9247425010840048 0.0 1.6549471895720984 0.0 D[PS]QSAN 4.1203 - 200 1 2.256 43973.1 0.4199999868869781 497 2852 3350 DOHH2_400M_050219_1,3351 DOHH2_400M_050219_1,3351,PHIFDCLLSAN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3352 16.148 800.0 93726.0 25 0 9426.5 + -1 ISYCYTLGY 9 116 570.2576791367476 1138.500805340295 2 570.2582275271416 MULTI CID FTMS 0 0 0 3350 140976.09375 0.8760782789832856 -3 0.0572261810302734 2 Carbamidomethyl (C) _ISYC(Carbamidomethyl (C))YTLGY_ REV__ENSG00000005486|ENST00000006777|RHBDD2;REV__nc|ENSG00000005486|Q6NTF9-2|RHBDD2;REV__nc|ENSG00000005486|Q6NTF9-3|RHBDD2 18.13498045792455 0.3457906370836843 1 GGGGGGY 7 -1 38.18 0.0 0.0 3.3535 0.0 0.0 615.2998292455461 0.0 615.2998292455461 0.0 9.802819856851386 0.0 0.0 0 0.0 0.0 0.0 0.0 GGGGGGY 3.3535 - 420 + 1 2.256 61098.3 0.5600000023841858 498 2852 3350 DOHH2_400M_050219_1,3352 DOHH2_400M_050219_1,3352,ISYCYTLGY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3353 16.156 468.0 222240.0 25 0 24918.0 + 18157 KTQRSPAL 8 84 450.7663040334881 899.5180551337762 2 450.7668029665947 MULTI CID FTMS 0 0 0 3350 134285.75 0.7532823524761202 -4 0.0612945556640625 3 Unmodified _KTQRSPAL_ REV__ENST00000569105.5_1_11:69468929-69488043:-|nuORF 34.10243960390752 0.3329570729325616 1 KT 2 -1 31.911 0.0 0.0 3.5476 0.0 0.0 0.0 667.3524926549169 667.3524926549169 16.42642683904553 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.3807196863200844 0.0 KT 3.5476 + + 59 + 1 2.256 86298.0 1.0 499 2852 3350 DOHH2_400M_050219_1,3353 DOHH2_400M_050219_1,3353,KTQRSPAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3355 16.174 800.0 66565.0 25 0 5588.1 + 6038 DSDSEEPSKY 10 99 578.7356548931618 1155.4567568531236 2 578.7358276247978 MULTI CID FTMS 0 0 0 3354 31485.00390625 0.0922118067927122 7 -0.1360721588134765 1 Unmodified _DSDSEEPSKY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 37.07464296494664 0.1884581770199685 1 {[DS]|[MA]|[CV]|TT}DSEEPSKY 10 0 + 50.596 0.0 0.0 4.3788 4.3788 85.735 0.0 0.0 0.0 35.99153133413289 13.03727511607334 13.03727511607334 20.48455006504028 0 0.4247425010840047 0.0 0.3494850021680094 0.0 + + {[DS]|[MA]|[CV]|TT}DSEEPSKY;{[DS]|[MA]|[CV]|TT}DS{M(Oxidation (M))|F}[HA]SKY;{[DS]|[MA]|[CV]|TT}D{[YD]|[{M(Oxidation (M))|F}M]}[HN]KY 4.3788;2.606;0.71111 +;-;- + 157 + 1 2.256 47267.2 0.5199999809265137 500 2853 3354 DOHH2_400M_050219_1,3355 DOHH2_400M_050219_1,3355,DSDSEEPSKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3356 16.188 800.0 80239.0 25 0 9402.4 + 39671 VEEKDPQSTN 10 103 573.7671743343803 1145.5197957355606 2 573.7667724490166 MULTI CID FTMS 0 0 0 3354 96187.1875 1.0 0 0.0 2 Unmodified _VEEKDPQSTN_ REV__nc|ENSG00000105429|Q7Z7M0-2|MEGF8 53.40400417844725 0.0601721406801337 1 [VG]{[QN]|[E{I|L}]|[KN]}DPSQSTN 11 -1 + 62.171 0.0 0.0 5.4274 5.4274 82.359 0.0 0.0 0.0 2.129622093848376 45.18169825231251 2.129622093848376 6.461280356782382 0 0.9247425010840048 1.3010299956639813 1.3494850021680094 0.0 [VG]{[QN]|[E{I|L}]|[KN]}DPSQSTN;{[MG]|[TS]}[{I|L}P]DPSQSTN;[VG]{[QN]|[E{I|L}]|[KN]}DPS[AG]STN;{[TV]|[{I|L}S]}[TP]DPSQSTN;{[MG]|[TS]}[{I|L}P]DPS[AG]STN;{[TV]|[{I|L}S]}[TP]DPS[AG]STN;[AG]SP{[QD]|[EN]|[WG]|[KD]|[RS]}[RN]STN;{[MG]|[TS]}[{I|L}P]D{[{M(Oxidation (M))|F}H]|[RQ]}DTN;[VG]{[QN]|[E{I|L}]|[KN]}DPS[C(Carbamidomethyl (C))R]N;{[QS]|[NT]}P{[QD]|[EN]|[WG]|[KD]|[RS]}[RN]STN 5.4274;4.8633;4.6305;4.4853;4.0664;3.6884;2.9428;2.5901;2.4983;2.3461 -;-;-;-;-;-;-;-;-;- 287 1 2.256 52138.1 0.4699999988079071 501 2853 3354 DOHH2_400M_050219_1,3356 DOHH2_400M_050219_1,3356,VEEKDPQSTN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3357 16.202 800.0 160330.0 25 0 18662.0 + 6509 EAKKIERL 8 101 493.8029933194494 985.5914337056988 2 493.8035461306572 MULTI CID FTMS 0 0 0 3354 111208.4453125 1.0 0 0.0 3 Unmodified _EAKKIERL_ ENSG00000183520|ENST00000373014|UTP11;ENST00000488453.1_1_1:38483328-38489297:+|nuORF;nc|ENSG00000183520|Q9Y3A2-2|UTP11 29.84058131909904 0.4163871034372953 1 EAKK{I|L}ER{I|L} 8 0 + 65.278 0.0 0.0 6.6232 6.6232 81.309 0.0 0.0 0.0 26.586280037772745 7.316085869055122 7.316085869055122 1.7609125905568137 0 0.9596579994412564 1.3010299956639813 0.0 0.0 + + EAKK{I|L}ER{I|L};EAK{I|L}KER{I|L};EAKK{I|L}[{I|L}V]W;EAK{I|L}K[{I|L}V]W;{I|L}{[QS]|[NT]}K{I|L}ER{I|L};{I|L}{[QS]|[NT]}{I|L}KER{I|L};{I|L}{[QS]|[NT]}K{I|L}[{I|L}V]W;{I|L}{[QS]|[NT]}{I|L}K[{I|L}V]W;ERRK[{I|L}V]W 6.6232;6.4445;5.8809;5.7022;3.9257;3.747;3.1834;3.0047;1.8048 +;-;-;-;-;-;-;-;- + 155 + 1 2.256 104293.8 0.9399999976158142 502 2853 3354 DOHH2_400M_050219_1,3357 DOHH2_400M_050219_1,3357,EAKKIERL False True EAKKIERL 16.20167 493.803546130657 542288.25 3354.0 nc|ENSG00000183520|Q9Y3A2-2|UTP11;;ENST00000488453.1_1_1:38483328-38489297:+|nuORF;;ENSG00000183520|ENST00000373014|UTP11 3.4119277795155845 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3360 16.212 214.0 275150.0 25 0 35839.0 -1 EKKLQNTMK 9 86 568.3104220273402 1134.6062911214804 2 568.3112060427666 MULTI CID FTMS 0 0 0 3359 236165.0 0.3952940566024215 -9 0.2058925628662109 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 1 T{M(Oxidation (M))|F}K 3 -1 40.49 0.0 0.0 3.5686 0.0 0.0 740.417546838922 0.0 740.417546838922 0.0 17.311675286346926 0.0 0.0 0 1.3807196863200843 0.0 0.3494850021680094 0.0 T{M(Oxidation (M))|F}K 3.5686 + + 213 1 2.256 50237.7 1.0 503 2855 3359 DOHH2_400M_050219_1,3360 DOHH2_400M_050219_1,3360,EKKLQNTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3361 16.217 262.0 173970.0 25 0 20706.0 + 18064 KTDPENTDY 9 76 541.73540512243 1081.45625731166 2 541.7358886599541 MULTI CID FTMS 0 0 0 3359 222874.65625 0.2841245142945287 -5 0.1277675628662109 2 Unmodified _KTDPENTDY_ ENSG00000105248|ENST00000262962|YJU2 41.95555342248728 0.0647214845423414 1 [EP]NTDKTDY 9 6 + 56.99 0.0 0.0 5.2697 5.2697 82.437 0.0 0.0 0.0 3.65279269351241 42.28499242097519 3.65279269351241 6.989700043360188 0 0.8182503180159344 0.0 0.7742275032520141 1.0941876774005248 [EP]NTDKTDY;{[ES]|[DT]|[{I|L}C]}[QP]DKTDY;[EP]GGTDKTDY;{[ES]|[DT]|[{I|L}C]}K[EP]NTDY;{[QS]|[NT]}[EP]DKTDY;[KT]D[EP]NTDY;[EP]D{[QS]|[NT]}KTDY;[EP]D[KT]NTDY 5.2697;4.6234;4.1513;4.1477;4.0667;3.8693;3.6987;2.8302 -;-;-;-;-;+;-;- + 226 1 2.256 37494.6 1.0 504 2855 3359 DOHH2_400M_050219_1,3361 DOHH2_400M_050219_1,3361,KTDPENTDY True True KTDPENTDY 16.217196 541.735888659954 8081785.0 3359.0 ENSG00000105248|ENST00000262962|YJU2 6.5137583414713545 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3363 16.234 800.0 61080.0 25 0 2551.3 -1 0 87 973.878708196842 1945.742863460484 2 973.8777343630792 MULTI CID FTMS 0 0 0 3362 100201.6640625 0.6337387653762702 -1 0.0114688873291015 1 1 SGGCYGNSSGGGGGGY 16 -1 122.31 0.0 0.0 6.2861 0.0 0.0 610.2399704476171 0.0 610.2399704476171 0.0 68.29451119278603 0.0 0.0 0 1.6989700043360187 0.0 1.4802046884880935 0.4247425010840047 SGGCYGNSSGGGGGGY 6.2861 - 135021 + 1 2.256 38220.8 0.4300000071525574 505 2856 3362 DOHH2_400M_050219_1,3363 DOHH2_400M_050219_1,3363, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3364 16.247 800.0 34816.0 25 0 1691.7 -1 0 51 1102.9270201907448 2203.8394874482897 2 1103.429980456829 MULTI CID FTMS 0 0 0 3362 91492.984375 0.7098143910023157 -3 0.0608882904052734 2 1 GGSSDGYMS{[CP]|[EA]}GSSGGNGGY 20 -1 127.98 0.0 0.0 5.8072 0.0 0.0 408.1737902820772 0.0 408.1737902820772 0.0 117.52401358784113 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.4247425010840047 GGSSDGYMS{[CP]|[EA]}GSSGGNGGY 5.8072 - 16147 + 1 2.256 25629.4 0.3700000047683716 506 2856 3362 DOHH2_400M_050219_1,3364 DOHH2_400M_050219_1,3364, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3365 16.255 410.0 261100.0 25 0 13120.0 + 5366 DLKEKKEVV 9 138 363.2168505643965 1086.6287222933895 3 363.2165405154228 MULTI CID FTMS 0 0 0 3362 103649.1484375 0.3437068070216744 -5 0.1202850341796875 3 Unmodified _DLKEKKEVV_ ENSG00000187514|ENST00000409115|PTMA;ENST00000466801.5_1_2:232571605-232577558:+|nuORF;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;ENST00000607242.1_1_13:82264202-82264532:+|nuORF;nc|ENSG00000187514|P06454|PTMA 39.21299971606389 0.0797768173001226 1 VEK 3 7 41.573 0.0 0.0 3.8259 0.0 0.0 0.0 727.3966768854124 727.3966768854124 10.364298920583366 0.0 0.0 0.0 0 0.3921590589602531 1.6989700043360187 0.3494850021680094 0.0 VEK 3.8259 - 104 + 1 2.256 90893.8 1.0 507 2856 3362 DOHH2_400M_050219_1,3365 DOHH2_400M_050219_1,3365,DLKEKKEVV True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3367 16.263 219.0 280820.0 25 0 32470.0 -1 EEIIRQMK 8 78 531.7841187568397 1061.5536845804793 2 531.7842895388603 MULTI CID FTMS 0 0 0 3366 257777.0625 0.7786975328792415 -5 0.136972427368164 1 Oxidation (M) _EEIIRQM(Oxidation (M))K_ ENSG00000141698|ENST00000435506|NT5C3B;ENST00000469698.5_1_17:39981777-39991902:-|nuORF;nc|ENSG00000141698|Q969T7-2|NT5C3B 12.531546534597751 0.7257836412119636 1 KTE[{I|L}P][WP]K 8 -1 29.363 0.0 0.0 2.7661 0.0 0.0 63.999089338554604 0.0 63.999089338554604 0.0 18.394236169056963 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.2887254899964357 KTE[{I|L}P][WP]K 2.7661 - 160 + 1 2.256 53262.0 1.0 508 2857 3366 DOHH2_400M_050219_1,3367 DOHH2_400M_050219_1,3367,EEIIRQMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3368 16.267 215.0 293610.0 25 0 36793.0 + -1 VQIAWLTMK 9 79 553.3052827886369 1104.5960126440737 2 553.3052245974541 MULTI CID FTMS 0 0 0 3366 252149.203125 0.7925127599691787 2 -0.0238094329833984 2 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 24.99096001346401 0.2132109383330889 1 TP{I|L}T{M(Oxidation (M))|F}K 6 -1 47.836 0.0 0.0 4.3306 0.0 0.0 399.2236500470719 0.0 399.2236500470719 0.0 32.039106406846045 0.0 0.0 0 1.6677353201839438 0.0 0.4247425010840047 0.0 TP{I|L}T{M(Oxidation (M))|F}K 4.3306 - 228 1 2.256 53167.0 1.0 509 2857 3366 DOHH2_400M_050219_1,3368 DOHH2_400M_050219_1,3368,VQIAWLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3369 16.275 429.0 244930.0 25 0 17935.0 + 11294 GEVEQQRTY 9 112 555.2649288900308 1108.5153048468617 2 555.2651244997978 MULTI CID FTMS 0 0 0 3366 223726.765625 0.1589049340844487 -12 0.258854866027832 3 Unmodified _GEVEQQRTY_ ENSG00000178691|ENST00000322652|SUZ12;ENST00000578106.1_1_17:30321573-30326019:+|nuORF 86.33184430468982 0.0159826143231117 1 {[DA]|[EG]}VEQQRTY 9 0 + 100.93 0.0 0.0 9.1047 9.1047 93.794 0.0 0.0 0.0 64.23155171734828 12.587418566968154 12.587418566968154 9.208187539523747 0 1.75 1.6989700043360187 0.7614393726401688 1.1989700043360187 + + {[DA]|[EG]}VEQQRTY;{[DA]|[EG]}VE[AG]QRTY;{[DA]|[EG]}VEQ[AG]RTY;{[DA]|[EG]}VE[AG][AG]RTY;WVEQVANTY;WVE[AG]VANTY;WVEQVAGGTY;{[DA]|[EG]}VEQ[HV]S[QP];{[DA]|[EG]}V[QA]GERTY;WV{M(Oxidation (M))|F}[HT]RTY 9.1047;8.274;8.274;7.4472;7.0495;6.2188;5.9036;5.6095;5.5688;5.4256 +;-;-;-;-;-;-;-;-;- + 1451 + 1 2.256 89034.5 1.0 510 2857 3366 DOHH2_400M_050219_1,3369 DOHH2_400M_050219_1,3369,GEVEQQRTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3372 16.285 219.0 228040.0 25 0 31653.0 + 12300 GSDRIKDGY 9 76 505.7488755392676 1009.4831981453352 2 505.7487365603447 MULTI CID FTMS 0 0 0 3371 109508.3125 0.1069817773550934 -13 0.2787685394287109 1 Unmodified _GSDRIKDGY_ ENSG00000204856|ENST00000377673|FAM216A;ENST00000538285.6_1_12:110906680-110924532:+|nuORF;ENST00000548869.1_1_12:110906313-110924532:+|nuORF 29.84058131909904 0.1515068451768857 1 DGY 3 6 40.177 0.0 0.0 3.98 0.0 0.0 656.3588479213292 0.0 656.3588479213292 0.0 27.078343878162343 0.0 0.0 0 1.274227503252014 0.0 0.4247425010840047 0.0 + DGY 3.98 + + 34 1 2.256 44025.5 1.0 511 2859 3371 DOHH2_400M_050219_1,3372 DOHH2_400M_050219_1,3372,GSDRIKDGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3373 16.292 397.0 181400.0 25 0 16828.0 + 7785 ELHEKLNEK 9 105 380.5402687783476 1138.5989769352427 3 380.5400573611259 MULTI CID FTMS 0 0 0 3371 85567.953125 0.67842226331946 -5 0.0769367218017578 2 Unmodified _ELHEKLNEK_ REV__ENST00000382952.7_2_4:1205601-1205772:-|nuORF 7.101721422024254 0.6667666702315642 1 [VS]A 3 -1 21.461 0.0 0.0 1.8848 0.0 0.0 0.0 878.4379411288552 878.4379411288552 -4.49625795392075 0.0 -4.49625795392075 0.0 0 0.0 2.0 0.0 0.0 [VS]A 1.8848 - 97 1 2.256 63876.6 1.0 512 2859 3371 DOHH2_400M_050219_1,3373 DOHH2_400M_050219_1,3373,ELHEKLNEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3376 16.309 595.0 131050.0 25 0 15880.0 + 18056 KTDLHNEGY 9 112 538.7537996671131 1075.493046401026 2 538.7541992068291 MULTI CID FTMS 0 0 0 3375 103227.296875 0.0266846715257237 -14 0.2925605773925781 1 Unmodified _KTDLHNEGY_ ENSG00000131378|ENST00000334133|RFTN1 68.75988807550267 0.0215783377819135 1 KTD{I|L}HNEGY 9 0 + 78.389 0.0 0.0 7.2886 7.2886 89.207 0.0 0.0 0.0 8.96713777483761 8.96713777483761 8.96713777483761 7.769250191953674 0 3.079689690656103 0.0 0.3252574989159953 0.3807196863200844 + + KTD{I|L}HNEGY;KTHEVNEGY;[H{I|L}]DTKNEGY;[KT]D{I|L}HNEGY;KTD{I|L}HGGEGY;[H{I|L}]{[MG]|[TS]}VGNEGY;[HT]ENGV{[TV]|[{I|L}S]}GY;{[CT]|[{M(Oxidation (M))|F}G]}[YV]KNEGY;[H{I|L}]DTKGGEGY;[KT]D{I|L}HGGEGY 7.2886;6.5662;6.4548;6.2488;6.0784;5.7148;5.6485;5.6247;5.5987;5.3927 +;-;-;+;-;-;-;-;-;- + 1510 + 1 2.256 66876.1 1.0 513 2861 3375 DOHH2_400M_050219_1,3376 DOHH2_400M_050219_1,3376,KTDLHNEGY True True KTDLHNEGY 16.309406 538.754199206829 51523969.5 3375.0 ENSG00000131378|ENST00000334133|RFTN1 6.828351179758708 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3379 16.319 158.0 487330.0 25 0 70806.0 + -1 IQRLETMK 8 89 517.7869034190061 1033.559253904812 2 517.7869750857353 MULTI CID FTMS 0 0 0 3378 392857.71875 0.1366068321546726 -2 0.0170555114746093 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 1 KTT[{I|L}P][WP]K 8 -1 46.024 0.0 0.0 4.4529 0.0 0.0 63.99921587329431 0.0 63.99921587329431 0.0 32.58909613066571 0.0 0.0 0 1.7302046884880935 0.0 1.274227503252014 0.2614393726401688 KTT[{I|L}P][WP]K 4.4529 - 213 + 1 2.256 62973.1 1.0 514 2863 3378 DOHH2_400M_050219_1,3379 DOHH2_400M_050219_1,3379,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3380 16.333 800.0 102870.0 25 0 10514.0 7454 EGPKETPSSAN 11 94 558.7619333153184 1115.5093136974367 2 558.7618286013603 MULTI CID FTMS 0 0 0 3378 112414.609375 0.5514522488902025 -6 0.0587196350097656 2 Unmodified _EGPKETPSSAN_ ENSG00000151929|ENST00000369085|BAG3 32.037481411007896 0.3399527776090619 1 {[DA]|[EG]}[{I|L}V]DPSQSAN 11 5 + 85.272 0.0 0.0 7.6442 7.6442 94.251 0.0 0.0 0.0 7.958578605927727 65.35004229758127 7.958578605927727 12.935695106011847 0 1.305462187404089 1.0969100130080565 1.75 0.3807196863200844 {[DA]|[EG]}[{I|L}V]DPSQSAN;{[DA]|[EG]}[{I|L}V]DPS[AG]SAN;{[DA]|[EG]}[{I|L}V]D{[{M(Oxidation (M))|F}H]|[RQ]}WN;{[QD]|[EN]|[WG]|[KD]|[RS]}[WK][HC]WN 7.6442;6.4846;3.1708;0.99946 -;-;-;- 296 1 2.256 69756.1 0.4699999988079071 515 2863 3378 DOHH2_400M_050219_1,3380 DOHH2_400M_050219_1,3380,EGPKETPSSAN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3381 16.347 800.0 61222.0 25 0 3488.3 + 25168 MSEDKPQDY 9 84 564.7290758735197 1127.4435988138391 2 564.7291137576103 MULTI CID FTMS 0 0 0 3378 96283.3984375 0.8229738260898251 3 -0.0775814056396484 3 Oxidation (M) _M(Oxidation (M))SEDKPQDY_ ENSG00000168036|ENST00000349496|CTNNB1;ENST00000465552.1_1_3:41277978-41278230:+|nuORF;ENST00000485265.1_1_3:41277322-41278230:+|nuORF 41.95555342248728 0.0647214845423414 1 {M(Oxidation (M))|F}SEDK[QP]DY 9 0 + 71.916 0.0 0.0 6.3787 6.3787 92.555 0.0 0.0 0.0 50.94720941673181 16.478174818886373 16.478174818886373 18.50711233356286 0 0.8807196863200843 0.0 0.4247425010840047 0.4247425010840047 + + {M(Oxidation (M))|F}SEDK[QP]DY;{M(Oxidation (M))|F}SEDK[WM]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WT]|[RM]}KDESE;{M(Oxidation (M))|F}SEDK[Q{I|L}]{[{M(Oxidation (M))|F}D]|MM};{M(Oxidation (M))|F}SWW[QP]DY;{M(Oxidation (M))|F}SE[WH]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y;[C(Carbamidomethyl (C))K][{M(Oxidation (M))|F}E]{[TV]|[{I|L}S]}ESE;{M(Oxidation (M))|F}SE[WH]YYP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WT]|[RM]}WWSE;{M(Oxidation (M))|F}SWW[WM]W 6.3787;4.7372;4.4044;4.1362;3.9645;3.8751;2.8081;2.6055;1.9902;1.9524 +;-;-;-;-;-;-;-;-;- + 167 + 1 2.256 42567.5 0.4799999892711639 516 2863 3378 DOHH2_400M_050219_1,3381 DOHH2_400M_050219_1,3381,MSEDKPQDY True False MSEDKPQDY 16.346854 564.72911375761 637307.8125 3378.0 ENSG00000168036|ENST00000349496|CTNNB1;;ENST00000485265.1_1_3:41277322-41278230:+|nuORF;;ENST00000465552.1_1_3:41277978-41278230:+|nuORF 8.995186805725098 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3383 16.355 330.0 242330.0 25 0 22371.0 + 8407 ESEPGRGAQY 10 103 547.2492658662898 1092.4839787993794 2 547.2493774294853 MULTI CID FTMS 0 0 0 3382 263192.21875 0.3411489001973054 17 -0.2045059204101562 1 Unmodified _ESEPGRGAQY_ ENSG00000112651|ENST00000388752|MRPL2;ENST00000491898.5_1_6:43023605-43023818:-|nuORF 41.8396318013385 0.1381409678234242 1 {[ES]|[DT]|[{I|L}C]}EPCKKSW 9 6 + 27.391 0.0 0.0 2.5072 2.5072 78.471 0.0 0.0 0.0 10.40153116702648 5.617515817243515 5.617515817243515 9.799402060710314 0 0.3807196863200844 0.0 0.0 0.805462187404089 {[ES]|[DT]|[{I|L}C]}EPCKKSW;{[ES]|[DT]|[{I|L}C]}EPT[R{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]};{[ES]|[DT]|[{I|L}C]}E[NS][RV]SW;{[ES]|[DT]|[{I|L}C]}E{[TV]|[{I|L}S]}QQSW;[QA]QDT[R{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]};[RD][C(Carbamidomethyl (C))D][RV]SW;{[ES]|[DT]|[{I|L}C]}{[QD]|[EN]|[WG]|[KD]|[RS]}[WR]SW 2.5072;1.6103;1.5072;0.99352;0.7118;0.032108;0.011755 -;-;-;-;-;-;- 289 + 1 2.256 66128.8 1.0 517 2864 3382 DOHH2_400M_050219_1,3383 DOHH2_400M_050219_1,3383,ESEPGRGAQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3384 16.369 800.0 104870.0 25 0 6989.9 + 5367 DLKEKKEVV 9 118 544.3215219572331 1086.6284909812662 2 544.3219482302666 MULTI CID FTMS 0 0 0 3382 85686.8203125 1.0 0 0.0 2 Unmodified _DLKEKKEVV_ ENSG00000187514|ENST00000409115|PTMA;ENST00000466801.5_1_2:232571605-232577558:+|nuORF;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;ENST00000607242.1_1_13:82264202-82264532:+|nuORF;nc|ENSG00000187514|P06454|PTMA 39.92294525591503 0.0758795494663778 1 {NN|[MP]|[D{I|L}]|[EV]}KKEK{I|L}DV 9 4 + 66.454 0.0 0.0 6.1156 6.1156 90.949 0.0 0.0 0.0 13.423597042265506 28.046603441601874 13.423597042265506 14.031148066561222 0 1.1549471895720984 2.0 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}KKEK{I|L}DV;{[TV]|[{I|L}S]}GVKEK{I|L}DV;{[TV]|[{I|L}S]}GKVEK{I|L}DV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VKEK{I|L}DV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KVEK{I|L}DV;AA[{I|L}T]KEK{I|L}DV 6.1156;4.8243;4.2293;4.0267;3.4317;2.3478 -;-;-;-;-;- 371 1 2.256 67493.5 0.4699999988079071 518 2864 3382 DOHH2_400M_050219_1,3384 DOHH2_400M_050219_1,3384,DLKEKKEVV True True DLKEKKEVV 16.369212 544.321948230267 1588828.4375 3382.0 ENST00000607242.1_1_13:82264202-82264532:+|nuORF;;nc|ENSG00000187514|P06454|PTMA;;ENST00000466801.5_1_2:232571605-232577558:+|nuORF;;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;;ENSG00000187514|ENST00000409115|PTMA 4.95462433497111 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3386 16.386 800.0 81339.0 25 0 6236.5 -1 NYWLRCCMHRW 11 85 820.8558076589262 1639.6970623846523 2 820.8558837771416 MULTI CID FTMS 0 0 0 3385 74777.5859375 0.1034129300414631 25 -0.3397445678710937 1 Carbamidomethyl (C),Oxidation (M) _NYWLRC(Carbamidomethyl (C))CM(Oxidation (M))HRW_ ENSG00000146221|ENST00000371505|TCTE1 0.3506318815782774 0.8734936314171269 1 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE 14 -1 + 90.895 0.0 0.0 5.5434 5.5434 79.97 0.0 0.0 0.0 66.43130718590854 16.4172791154882 16.4172791154882 3.309932190414244 0 0.9177353201839438 0.0 2.555462187404089 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]Q{M(Oxidation (M))|F}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]Q{M(Oxidation (M))|F}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[W{M(Oxidation (M))|F}]QEQNAE;[EP]AEQGAA[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQ{M(Oxidation (M))|F}[WE]QEQNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGQE;{[CP]|[EA]}PEQGAA[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[W{M(Oxidation (M))|F}]QEQGGAE 5.5434;5.3416;5.1368;4.9335;4.8813;4.8144;4.7436;4.7352;4.6791;4.678 -;-;-;-;-;-;-;-;-;- 6710 + 1 2.256 49476.8 0.4000000059604645 519 2865 3385 DOHH2_400M_050219_1,3386 DOHH2_400M_050219_1,3386,NYWLRCCMHRW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3387 16.391 299.0 333210.0 25 0 46998.0 7951 ELSHNADKY 9 120 359.5052691078702 1075.4939779238107 3 359.5046569705009 MULTI CID FTMS 0 0 0 3385 144467.046875 0.2132472182049861 -14 0.2723236083984375 2 Unmodified _ELSHNADKY_ nc|ENSG00000176124|O43261|DLEU1 14.838274106304384 0.4350285940865338 1 ENK{[RE]|[WV]}Y 6 6 27.33 0.0 0.0 2.5412 0.0 0.0 238.09495932541284 0.0 238.09495932541284 0.0 11.427517615494828 0.0 0.0 0 0.1923877696554315 0.0 0.0 0.0 ENK{[RE]|[WV]}Y 2.5412 - 240 + 1 2.256 83481.4 1.0 520 2865 3385 DOHH2_400M_050219_1,3387 DOHH2_400M_050219_1,3387,ELSHNADKY False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 3390 16.4 64.0 1320100.0 25 0 108950.0 + 27312 PHPHGREALPV 11 80 403.8879992177143 1208.6421682533428 3 403.8877136111259 MULTI CID FTMS 0 0 0 3389 726005.75 0.1852867886908322 -15 0.2773380279541015 1 Unmodified _PHPHGREALPV_ ENST00000400451.6_1_22:20760237-20760540:+|nuORF 9.38312468134398 0.8308777417566128 1 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 7 9 40.231 0.0 0.0 3.3286 0.0 0.0 0.0 266.16257654361567 266.16257654361567 23.063856323849457 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.5649093276264391 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 3.3286 - 211 + 1 2.256 69142.2 1.0 521 2867 3389 DOHH2_400M_050219_1,3390 DOHH2_400M_050219_1,3390,PHPHGREALPV False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3391 16.411 642.0 221200.0 25 0 20906.0 + 37519 TLHHNHIQPL 10 87 605.3281699867729 1208.6417870403457 2 605.3286620974541 MULTI CID FTMS 0 0 0 3389 119426.34375 0.177275211938351 -13 0.1934928894042968 2 Unmodified _TLHHNHIQPL_ REV__ENST00000357552.7_2_20:58507149-58508632:-|nuORF 13.90604991867851 0.6142120002215601 1 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]E 5 -1 24.889 0.0 0.0 2.0593 0.0 0.0 0.0 531.2800387018186 531.2800387018186 10.404805757153673 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]E 2.0593 - 226 + 1 2.256 105147.9 1.0 522 2867 3389 DOHH2_400M_050219_1,3391 DOHH2_400M_050219_1,3391,TLHHNHIQPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3394 16.431 800.0 157460.0 25 0 9977.0 + 13737 HRAQFIFVI 9 159 377.5524124488632 1129.6354079467897 3 377.5515319705009 MULTI CID FTMS 0 0 0 3393 70886.25 0.8189136873616238 -2 0.0198936462402343 1 Unmodified _HRAQFIFVI_ REV__ENST00000357585.3_2_17:71167612-71167879:+|nuORF 8.155526934196011 0.6299788542272896 1 {I|L} 1 -1 18.411 0.0 0.0 1.6298 0.0 0.0 998.5406183733506 0.0 998.5406183733506 0.0 4.599009323677093 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L} 1.6298 + + 109 + 1 2.256 102010.6 0.3600000143051147 523 2869 3393 DOHH2_400M_050219_1,3394 DOHH2_400M_050219_1,3394,HRAQFIFVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3397 16.441 157.0 417530.0 25 0 46887.0 + 19333 LEMRDKESL 9 88 374.19350413284735 1119.558682998742 3 374.1927062869072 MULTI CID FTMS 0 0 0 3396 181369.875 0.6824874808103768 -3 0.02435302734375 1 Unmodified _LEMRDKESL_ REV__ENSG00000117616|ENST00000243189|RSRP1;REV__nc|ENSG00000117616|Q9BUV0-2|RSRP1;REV__nc|ENSG00000117616|Q9BUV0-3|RSRP1 7.910154910731844 0.6385446671287552 1 {I|L} 1 -1 13.495 0.0 0.0 1.2054 0.0 0.0 988.4638323901468 0.0 988.4638323901468 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2054 + + 35 + 1 2.256 55768.5 1.0 524 2871 3396 DOHH2_400M_050219_1,3397 DOHH2_400M_050219_1,3397,LEMRDKESL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3400 16.462 800.0 178920.0 25 0 14130.0 + 31865 RTKVHAEL 8 142 477.28067960197234 952.5468062707448 2 477.2811157107353 MULTI CID FTMS 0 0 0 3399 64600.7734375 0.7475987538120634 3 -0.0568256378173828 1 Unmodified _RTKVHAEL_ ENSG00000146731|ENST00000275603|CCT6A;ENST00000493855.1_1_7:56123379-56123520:+|nuORF;nc|ENSG00000146731|P40227-2|CCT6A 21.53697664764585 0.591232569029014 1 HAE{I|L} 4 4 35.838 0.0 0.0 3.7624 0.0 0.0 484.31407363105626 0.0 484.31407363105626 0.0 20.35374035531858 0.0 0.0 0 0.5176452685714268 0.0 0.3494850021680094 0.0 + HAE{I|L} 3.7624 + + 112 1 2.256 113356.3 0.4199999868869781 525 2873 3399 DOHH2_400M_050219_1,3400 DOHH2_400M_050219_1,3400,RTKVHAEL False True RTKVHAEL 16.461555 477.2799 371933.09375 3399.0 ENST00000493855.1_1_7:56123379-56123520:+|nuORF;;ENSG00000146731|ENST00000275603|CCT6A;;nc|ENSG00000146731|P40227-2|CCT6A 2.400300900141398 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3402 16.467 149.0 491930.0 25 0 73143.0 -1 EKKLQNTMK 9 80 568.3104220273402 1134.6062911214804 2 568.3109619021416 MULTI CID FTMS 0 0 0 3401 500897.34375 0.8384042637660749 10 -0.1140060424804687 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 1 T{M(Oxidation (M))|F}K 3 -1 38.232 0.0 0.0 3.3696 0.0 0.0 740.4185216074754 0.0 740.4185216074754 0.0 18.305300040193018 0.0 0.0 0 1.3807196863200843 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.3696 + + 141 1 2.256 59591.3 1.0 526 2874 3401 DOHH2_400M_050219_1,3402 DOHH2_400M_050219_1,3402,EKKLQNTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3403 16.477 572.0 166440.0 25 0 62781.0 -1 0 89 472.2732449285645 471.2659684619645 1 472.2727233767509 MULTI CID FTMS 0 0 0 3401 120900.046875 0.7027420333954917 -20 0.2599124908447265 2 1 W 1 -1 14.604 0.0 0.0 3.0989 0.0 0.0 267.17598540708013 0.0 267.17598540708013 0.0 3.184110487935872 0.0 0.0 0 0.0 0.0 0.0 0.0 W 3.0989 - 16 + 1 2.256 77649.9 1.0 527 2874 3401 DOHH2_400M_050219_1,3403 DOHH2_400M_050219_1,3403, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3405 16.485 187.0 183100.0 25 0 21952.0 + 18065 KTDPENTDY 9 60 541.73540512243 1081.45625731166 2 541.7351562380791 MULTI CID FTMS 0 0 0 3404 228846.84375 0.2917379634917761 15 -0.2318592071533203 1 Unmodified _KTDPENTDY_ ENSG00000105248|ENST00000262962|YJU2 28.49450938151212 0.1686335738423394 1 [EP]NTDKTDY 9 6 + 55.243 0.0 0.0 5.1082 5.1082 82.631 0.0 0.0 0.0 7.969837217489513 24.28720297285992 7.969837217489513 7.969837217489513 0 0.8182503180159344 1.0457574905606752 0.3252574989159953 0.9247425010840048 [EP]NTDKTDY;{[ES]|[DT]|[{I|L}C]}KPENTDY;[EP]GGTDKTDY;[DP]QTDKTDY;[KT]DPENTDY;{[ES]|[DT]|[{I|L}C]}[QP]DKTDY;{[ES]|[DT]|[{I|L}C]}KPEGGTDY;[EP][KS]ENTDY;[DP][AG]TDKTDY;[KT]DPEGGTDY 5.1082;4.3712;4.2567;4.068;3.93;3.7732;3.5198;3.2364;3.2165;3.0786 -;-;-;-;+;-;-;-;-;- + 168 1 2.256 33572.6 1.0 528 2875 3404 DOHH2_400M_050219_1,3405 DOHH2_400M_050219_1,3405,KTDPENTDY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3406 16.488 186.0 240100.0 25 0 27916.0 + 37960 TMKATYHLP 9 71 531.2785345479741 0 531.2781860232353 PEAK CID FTMS 0 0 0 3404 165581.921875 0.9791840609454874 -1 0.0155410766601562 2 Unmodified _TMKATYHLP_ REV__ENSG00000168124|ENST00000304646|OR1F1 28.486842064014134 0.1241350795510704 1 H 1 -1 11.99 0.0 0.0 1.1305 0.0 0.0 228.14852739653617 692.3129964350845 920.4615238316208 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 H 1.1305 + + 14 + 1 2.256 41982.6 1.0 529 2875 3404 DOHH2_400M_050219_1,3406 DOHH2_400M_050219_1,3406,TMKATYHLP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3407 16.502 800.0 237160.0 25 0 14651.0 + 32803 SEFEGHKRI 9 205 368.1921587222975 0 368.1924621462822 PEAK CID FTMS 0 0 0 3404 94284.3984375 0.6734391693471083 14 -0.2154579162597656 3 Unmodified _SEFEGHKRI_ ENSG00000106948|ENST00000374088|AKNA;nc|ENSG00000106948|Q7Z591-2|AKNA;nc|ENSG00000106948|Q7Z591-5|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA;nc|ENSG00000106948|Q7Z591-8|AKNA 18.1463463914782 0.2188250594445807 1 S 1 8 8.6842 0.0 0.0 1.1825 0.0 0.0 561.3008080678388 83.0144518487914 644.3152599166302 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1694451763165201 0.0 + S 1.1825 + + 11 + 1 2.256 153131.3 0.7900000214576721 530 2875 3404 DOHH2_400M_050219_1,3407 DOHH2_400M_050219_1,3407,SEFEGHKRI False True SEFEGHKRI 16.502026 368.192462146282 1470548.5 3404.0 nc|ENSG00000106948|Q7Z591-7|AKNA;;nc|ENSG00000106948|Q7Z591-2|AKNA;;ENSG00000106948|ENST00000374088|AKNA;;nc|ENSG00000106948|Q7Z591-8|AKNA;;nc|ENSG00000106948|Q7Z591-5|AKNA 2.253399213155111 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3412 16.519 104.0 458250.0 25 0 36136.0 + 11295 GEVEQQRTY 9 72 555.2649288900308 1108.5153048468617 2 555.2647582888603 MULTI CID FTMS 0 0 0 3411 598405.375 0.4250254385277234 10 -0.1785297393798828 1 Unmodified _GEVEQQRTY_ ENSG00000178691|ENST00000322652|SUZ12;ENST00000578106.1_1_17:30321573-30326019:+|nuORF 70.33199760932243 0.0209706178985989 1 {[DA]|[EG]}VEQQRTY 9 0 + 98.026 0.0 0.0 8.843 8.843 93.605 0.0 0.0 0.0 75.85593167151288 12.98332479720628 12.98332479720628 9.208187539523747 0 1.3494850021680094 1.6989700043360187 0.805462187404089 1.1861818737241734 + + {[DA]|[EG]}VEQQRTY;{[DA]|[EG]}VE[AG]QRTY;{[DA]|[EG]}VEQ[AG]RTY;{[DA]|[EG]}VE[AG][AG]RTY;WV{M(Oxidation (M))|F}[HT]RTY;{[DA]|[EG]}V[YT]QE{[{M(Oxidation (M))|F}H]|[RQ]};{[DA]|[EG]}V[YT][AG]E{[{M(Oxidation (M))|F}H]|[RQ]};{NN|[MP]|[D{I|L}]|[EV]}G[YT]QE{[{M(Oxidation (M))|F}H]|[RQ]};{NN|[MP]|[D{I|L}]|[EV]}G[YT][AG]E{[{M(Oxidation (M))|F}H]|[RQ]};{[TV]|[{I|L}S]}[HT]Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TY 8.843;8.0123;8.0123;7.1855;5.2254;3.6608;2.8302;2.5792;1.7486;0.92466 +;-;-;-;-;-;-;-;-;- + 249 + 1 2.256 46003.6 1.0 531 2879 3411 DOHH2_400M_050219_1,3412 DOHH2_400M_050219_1,3412,GEVEQQRTY True True GEVEQQRTY 16.518834 555.26475828886 13520165.0 3411.0 ENST00000578106.1_1_17:30321573-30326019:+|nuORF;;ENSG00000178691|ENST00000322652|SUZ12 7.648296515146892 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3413 16.526 417.0 197940.0 25 0 13285.0 + 6785 EEAGGRPAM 9 123 459.2113767939762 916.4082006547524 2 459.2101928591728 MULTI CID FTMS 0 0 0 3411 104572.296875 0.3414856499661199 -6 0.06884765625 2 Unmodified _EEAGGRPAM_ ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU 28.486842064014134 0.1687311288560894 1 EEAGA 5 4 45.471 0.0 0.0 4.9619 0.0 0.0 0.0 456.2056978815063 456.2056978815063 31.49166239860314 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 EEAGA 4.9619 - 191 + 1 2.256 64924.2 1.0 532 2879 3411 DOHH2_400M_050219_1,3413 DOHH2_400M_050219_1,3413,EEAGGRPAM False True EEAGGRPAM 16.526267 459.210192859173 1330011.5 3411.0 ENSG00000153187|ENST00000640218|HNRNPU;;nc|ENSG00000153187|Q00839-2|HNRNPU;;ENST00000476241.2_2_1:245025757-245027609:-|nuORF 5.958776632944743 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3414 16.537 591.0 177050.0 25 0 7492.7 + 32172 RVSSTPVAFAT 11 156 379.2099589485924 1134.6080474459773 3 379.2090637087822 MULTI CID FTMS 0 0 0 3411 88736.046875 1.0 0 0.0 3 Unmodified _RVSSTPVAFAT_ REV__ENST00000587016.5_1_19:4501842-4502019:+|nuORF 5.868138319507137 0.8474616764770629 1 TE 2 -1 14.09 0.0 0.0 1.2418 0.0 0.0 604.3265055532023 297.1676424615844 901.4941480147868 0.0 0.0 0.0 0.0 0 0.5 0.0 0.6861818737241735 0.0 TE 1.2418 - 194 + 1 2.256 87879.9 1.0 533 2879 3411 DOHH2_400M_050219_1,3414 DOHH2_400M_050219_1,3414,RVSSTPVAFAT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3416 16.542 149.0 387860.0 25 0 45784.0 + 12301 GSDRIKDGY 9 83 505.7488755392676 1009.4831981453352 2 505.7488281130791 MULTI CID FTMS 0 0 0 3415 358632.78125 0.3503585388180046 8 -0.1520233154296875 1 Unmodified _GSDRIKDGY_ ENSG00000204856|ENST00000377673|FAM216A;ENST00000538285.6_1_12:110906680-110924532:+|nuORF;ENST00000548869.1_1_12:110906313-110924532:+|nuORF 55.23464941255904 0.0288927259679799 1 [SG][RD]{I|L}KDGY 9 0 + 52.348 0.0 0.0 5.1856 5.1856 90.1 0.0 0.0 0.0 4.881062318217104 43.395709633532746 4.881062318217104 52.34813456081959 0 2.004432191740108 0.9208187539523752 0.0 0.3252574989159953 + + [SG][RD]{I|L}KDGY 5.1856 + + 51 1 2.256 53472.8 1.0 534 2880 3415 DOHH2_400M_050219_1,3416 DOHH2_400M_050219_1,3416,GSDRIKDGY True True GSDRIKDGY 16.542151 505.748828113079 8388928.0 3415.0 ENST00000548869.1_1_12:110906313-110924532:+|nuORF;;ENST00000538285.6_1_12:110906680-110924532:+|nuORF;;ENSG00000204856|ENST00000377673|FAM216A 7.409929434458415 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3417 16.551 523.0 191880.0 25 0 18150.0 + 12810 EEGAVDKSY 9 129 499.2275325124351 996.4405120916704 2 499.2277709841728 MULTI CID FTMS 0 0 0 3415 116784.90625 0.404234868573697 -6 0.0750560760498046 2 Unmodified _GVSVSQYEE_ nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 20.453626601364224 0.2830276176381075 1 EEQVDKSY 8 8 + 48.709 0.0 0.0 4.8883 4.8883 84.755 0.0 0.0 0.0 12.57007180900061 12.57007180900061 12.57007180900061 9.262137858390808 0 0.2614393726401688 1.6989700043360187 0.0 0.0 EEQVDKSY;EE[AG]VDKSY;EEQV[HM]QP;EEQ[HM]VQP;EE[RP]VQ[HC];EE[AG]V[HM]QP;EEQV[HM][AG]P;EE[AG][HM]VQP;EE[HM]QVQP;EEQ[HM]V[AG]P 4.8883;3.9588;3.2411;2.939;2.6186;2.3116;2.1415;2.0095;1.8559;1.8394 -;-;-;-;-;-;-;-;-;- 1139 + 1 2.256 83391.2 1.0 535 2880 3415 DOHH2_400M_050219_1,3417 DOHH2_400M_050219_1,3417,GVSVSQYEE False False EEGAVDKSY 16.551353 499.227770984173 1275453.25 3415.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 5.506863276163737 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3419 16.556 21.0 1678100.0 25 0 266510.0 + 18057 KTDLHNEGY 9 69 538.7537996671131 1075.493046401026 2 538.7541992068291 MULTI CID FTMS 0 0 0 3418 2426223.25 0.6271884708239758 6 -0.12200927734375 1 Unmodified _KTDLHNEGY_ ENSG00000131378|ENST00000334133|RFTN1 22.736283301280096 0.2418982879461534 1 NK{[RE]|[WV]}Y 5 7 25.273 0.0 0.0 2.3499 0.0 0.0 367.1388336724346 0.0 367.1388336724346 0.0 12.69377326076139 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 NK{[RE]|[WV]}Y 2.3499 - 79 + 1 2.256 31450.6 1.0 536 2881 3418 DOHH2_400M_050219_1,3419 DOHH2_400M_050219_1,3419,KTDLHNEGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3422 16.567 218.0 370620.0 25 0 60813.0 + 8812 EYDLAKGA 8 90 433.71637522594347 0 433.7164794802666 PEAK CID FTMS 0 0 0 3421 227391.3125 0.4669251297299087 -4 0.0461673736572265 1 Unmodified _EYDLAKGA_ REV__ENSG00000004766|ENST00000305866|VPS50;REV__nc|ENSG00000004766|Q96JG6-3|VPS50 34.10243960390752 0.1934076185521331 1 ED{I|L}A 4 -1 25.266 0.0 0.0 2.9195 0.0 0.0 163.06243884336567 271.1414888971313 434.20392774049697 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 ED{I|L}A 2.9195 - 24 + 1 2.256 68542.5 1.0 537 2883 3421 DOHH2_400M_050219_1,3422 DOHH2_400M_050219_1,3422,EYDLAKGA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3423 16.576 493.0 256560.0 25 0 26353.0 + 29066 QEKPSTEGY 9 146 519.7404490977761 1037.4663452623522 2 519.7406494021416 MULTI CID FTMS 0 0 0 3421 205958.59375 0.973153748007934 -1 0.0040702819824218 2 Unmodified _QEKPSTEGY_ ENSG00000119328|ENST00000322940|ABITRAM 24.020572477871973 0.2255576514309169 1 [TP]GET[WK]GY 9 7 [TP] + + 35.862 -2.6122 -1.3187 3.4567 3.4567 51.585 0.0 0.0 0.0 0.0 23.87214739041405 0.0 0.0 0 0.4247425010840047 0.0 1.1549471895720984 0.2396518287104437 [TP]GET[WK]GY 3.4567 - 564 + 1 2.256 97834.8 1.0 538 2883 3421 DOHH2_400M_050219_1,3423 DOHH2_400M_050219_1,3423,QEKPSTEGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3425 16.58 63.0 1045800.0 25 0 164600.0 + -1 IQRLETMK 8 74 517.7869034190061 1033.559253904812 2 517.7871581912041 MULTI CID FTMS 0 0 0 3424 917784.9375 0.3191376595834017 19 -0.4837322235107422 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 1 KTT[{I|L}P][WP]K 8 -1 52.682 0.0 0.0 5.0972 0.0 0.0 63.99892268454557 0.0 63.99892268454557 0.0 37.276296993281406 0.0 0.0 0 1.7302046884880935 0.0 1.3494850021680094 0.25 KTT[{I|L}P][WP]K 5.0972 - 187 + 1 2.256 55488.7 1.0 539 2884 3424 DOHH2_400M_050219_1,3425 DOHH2_400M_050219_1,3425,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3426 16.594 800.0 70780.0 25 0 5673.2 + 34473 SMKQKQEEI 9 97 560.78682280035 1119.5590926675 2 560.7871581912041 MULTI CID FTMS 0 0 0 3424 79510.671875 0.2958398339984572 9 -0.2198352813720703 2 Unmodified _SMKQKQEEI_ ENSG00000112312|ENST00000230056|GMNN;ENST00000468943.1_1_6:24775218-24777534:+|nuORF 40.23920728925047 0.0741434193262949 1 {[MS]|[{M(Oxidation (M))|F}A]}KQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EQ 8 3 48.14 0.0 0.0 4.2999 0.0 0.0 0.0 125.0722139947875 125.0722139947875 13.54303111733195 0.0 0.0 0.0 0 0.75 1.6989700043360187 0.6747425010840047 0.7059771852360797 {[MS]|[{M(Oxidation (M))|F}A]}KQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EQ 4.2999 - 791 + 1 2.256 46174.8 0.5099999904632568 540 2884 3424 DOHH2_400M_050219_1,3426 DOHH2_400M_050219_1,3426,SMKQKQEEI True True SMKQKQEEI 16.594205 560.787158191204 1071696.125 3424.0 ENST00000468943.1_1_6:24775218-24777534:+|nuORF;;ENSG00000112312|ENST00000230056|GMNN 4.046196937561035 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3427 16.608 800.0 59587.0 25 0 33178.0 -1 0 30 917.4125382560125 0 917.410693347454 PEAK CID FTMS 0 0 0 3424 68003.46875 1.0 0 0.0 3 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.256 44255.3 0.3499999940395355 541 2884 3424 DOHH2_400M_050219_1,3427 DOHH2_400M_050219_1,3427, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3430 16.618 171.0 405970.0 25 0 37897.0 + 774 AESDIMKRQ 9 106 359.8501467392456 1076.5286108179366 3 359.8499938845634 MULTI CID FTMS 0 0 0 3429 160476.390625 0.7439223280661504 3 -0.0804615020751953 1 Unmodified _AESDIMKRQ_ ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1 15.248480904072842 0.4239247793462406 1 {[CP]|[EA]}SD{I|L}MKRQ 9 0 {[CP]|[EA]} + + 31.758 0.71334 0.35653 2.95 2.95 50.325 0.0 0.0 0.0 0.0 17.778514492396127 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 + + {[CP]|[EA]}SD{I|L}MKRQ 2.95 + + 140 + 1 2.256 61239.0 1.0 542 2886 3429 DOHH2_400M_050219_1,3430 DOHH2_400M_050219_1,3430,AESDIMKRQ False True AESDIMKRQ 16.617992 359.849993884563 916682.9375 3429.0 ENSG00000105409|ENST00000648268|ATP1A3;;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;;ENSG00000163399|ENST00000295598|ATP1A1;;nc|ENSG00000105409|P13637-3|ATP1A3;;nc|ENSG00000163399|P05023-4|ATP1A1;;ENSG00000018625|ENST00000361216|ATP1A2;;nc|ENSG00000163399|P05023-3|ATP1A1;;nc|ENSG00000105409|P13637-2|ATP1A3 3.363852580388387 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3431 16.632 800.0 92130.0 25 0 8246.2 7455 EGPKETPSSAN 11 105 558.7619333153184 1115.5093136974367 2 558.7611572146416 MULTI CID FTMS 0 0 0 3429 74532.140625 0.3656189955270844 17 -0.4472007751464844 2 Unmodified _EGPKETPSSAN_ ENSG00000151929|ENST00000369085|BAG3 32.037481411007896 0.3399527776090619 1 {[DA]|[EG]}[{I|L}V]DPSQSAN 11 5 + 72.757 0.0 0.0 6.5223 6.5223 91.727 0.0 0.0 0.0 6.566597086175491 49.391979211549454 6.566597086175491 12.935695106011837 0 0.805462187404089 1.0457574905606752 0.9247425010840048 0.3807196863200844 {[DA]|[EG]}[{I|L}V]DPSQSAN;{[DA]|[EG]}[{I|L}V]DPS[AG]SAN;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}DPSQSAN;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}DPS[AG]SAN;[KG]Y[WY]QSAN;[KG]Y[WY][AG]SAN;{[DA]|[EG]}[{I|L}V]D{M(Oxidation (M))|F}HWN;C(Carbamidomethyl (C)){M(Oxidation (M))|F}G[WP]R{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}D{M(Oxidation (M))|F}HWN;{[QD]|[EN]|[WG]|[KD]|[RS]}[WK][HC]WN 6.5223;5.3627;4.9993;4.1809;3.1326;2.3071;2.2072;1.1933;0.68417;0.25579 -;-;-;-;-;-;-;-;-;- 386 1 2.256 59907.2 0.5 543 2886 3429 DOHH2_400M_050219_1,3431 DOHH2_400M_050219_1,3431,EGPKETPSSAN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3432 16.646 800.0 79286.0 25 0 9901.7 -1 GVCGCCYTCAS 11 92 562.1866598553079 1122.3587667774157 2 562.1866332888603 MULTI CID FTMS 0 0 0 3429 102893.21875 1.0 0 0.0 3 Carbamidomethyl (C) _GVC(Carbamidomethyl (C))GCCYTCAS_ ENSG00000150938|ENST00000280527|CRIM1 1.3295316138638542 0.8688751186870782 1 W 1 -1 14.604 0.0 0.0 1.3012 0.0 0.0 918.2688905340548 0.0 918.2688905340548 0.0 3.76098834896581 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.3012 - 13 + 1 2.256 54283.5 0.5099999904632568 544 2886 3429 DOHH2_400M_050219_1,3432 DOHH2_400M_050219_1,3432,GVCGCCYTCAS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3433 16.659 800.0 75031.0 25 0 7610.6 -1 MICCDCGGAP 10 90 570.7004826633587 1139.3864123935173 2 570.7006103396416 MULTI CID FTMS 0 0 0 3429 93129.09375 1.0 0 0.0 4 3 Carbamidomethyl (C) _MIC(Carbamidomethyl (C))C(Carbamidomethyl (C))DC(Carbamidomethyl (C))GGAP_ ENSG00000134760|ENST00000257192|DSG1 1.844237919475145 0.7181058121064529 1 W 1 -1 12.764 0.0 0.0 1.1203 0.0 0.0 935.296200456797 0.0 935.296200456797 0.0 1.170416030166841 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1203 - 50 + 1 2.256 50878.0 0.4900000095367431 545 2886 3429 DOHH2_400M_050219_1,3433 DOHH2_400M_050219_1,3433,MICCDCGGAP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3434 16.673 800.0 93729.0 25 0 15279.0 -1 0 96 527.2601949311033 526.2529184645033 1 527.2610961794853 MULTI CID FTMS 0 0 0 3429 92484.53125 1.0 0 0.0 5 1 DW 2 -1 23.583 0.0 0.0 4.4814 0.0 0.0 207.1373006439939 0.0 207.1373006439939 0.0 11.10924374808178 0.0 0.0 0 0.5 0.0 0.0 0.0 DW 4.4814 - 43 + 1 2.256 61748.4 0.4699999988079071 546 2886 3429 DOHH2_400M_050219_1,3434 DOHH2_400M_050219_1,3434, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3436 16.678 21.0 2724700.0 25 0 235170.0 + 13660 HPVSWKRQAT 10 67 403.8879992177143 1208.6421682533428 3 403.8878051638603 MULTI CID FTMS 0 0 0 3435 1842164.875 0.4701461578338717 5 -0.0698776245117187 1 Unmodified _HPVSWKRQAT_ REV__ENST00000465617.1_1_10:12123569-12136179:+|nuORF 6.723162845929126 0.6955379296933136 1 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 7 -1 36.298 0.0 0.0 3.0032 0.0 0.0 0.0 266.16181360416255 266.16181360416255 25.32924130362474 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 3.0032 - 136 + 1 2.256 50380.6 1.0 547 2887 3435 DOHH2_400M_050219_1,3436 DOHH2_400M_050219_1,3436,HPVSWKRQAT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3437 16.682 222.0 405860.0 25 0 38207.0 + -1 TIHIFRIMY 9 71 605.3281699867729 1208.6417870403457 2 605.3282348513603 MULTI CID FTMS 0 0 0 3435 347802.09375 0.5162737796880221 7 -0.161447525024414 2 Oxidation (M) _TIHIFRIM(Oxidation (M))Y_ REV__ENST00000316660.6_1_18:57570359-57570470:+|nuORF 15.847184025352805 0.4077185912009129 1 [{I|L}T]HPPE 6 -1 36.515 0.0 0.0 3.0212 0.0 0.0 0.0 531.2767428033811 531.2767428033811 23.41637507904749 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.0 [{I|L}T]HPPE 3.0212 - 163 + 1 2.256 68927.0 1.0 548 2887 3435 DOHH2_400M_050219_1,3437 DOHH2_400M_050219_1,3437,TIHIFRIMY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3438 16.689 349.0 198570.0 25 0 31496.0 + 36521 TAGGEGAW 8 121 374.6663979321149 747.3182429310299 2 374.6664916872978 MULTI CID FTMS 0 0 0 3435 95569.9140625 0.903210075002263 -1 0.0612506866455078 3 Unmodified _TAGGEGAW_ REV__ENST00000552197.5_1_12:46661016-46661265:-|nuORF 5.760428011301431 0.7893668129297577 1 {I|L}GD 3 -1 40.394 0.0 0.0 5.4052 0.0 0.0 0.0 459.1622408502563 459.1622408502563 26.414412723804546 0.0 0.0 0.0 0 0.3494850021680094 1.0969100130080565 0.4247425010840047 0.0 {I|L}GD 5.4052 - 91 + 1 2.256 57515.8 1.0 549 2887 3435 DOHH2_400M_050219_1,3438 DOHH2_400M_050219_1,3438,TAGGEGAW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3441 16.709 800.0 121500.0 25 0 11432.0 + 14095 IAQERKTQL 9 115 543.8167687932428 1085.6189846532857 2 543.8170043826103 MULTI CID FTMS 0 0 0 3440 143497.296875 1.0 0 0.0 1 Unmodified _IAQERKTQL_ ENSG00000100023|ENST00000398831|PPIL2;ENST00000462188.1_1_22:22049070-22049360:+|nuORF;nc|ENSG00000100023|Q13356-2|PPIL2 66.68293810318366 0.0223819955243495 1 [{I|L}A]GAERKTQ{I|L} 10 2 + 74.544 0.0 0.0 6.8665 6.8665 81.959 0.0 0.0 0.0 4.066818653688529 50.69984993812689 4.066818653688529 1.7609125905568137 0 1.6677353201839438 2.0 0.0 0.3252574989159953 [{I|L}A]GAERKTQ{I|L};[{I|L}A]QERKTQ{I|L};[{I|L}A]QTE[RK]Q{I|L};[{I|L}A]GATE[RK]Q{I|L};[{I|L}A]GAERKT[AG]{I|L};[{I|L}A]QERKT[AG]{I|L};[{I|L}A]QTE[W{I|L}]{I|L}{I|L};[{I|L}A]QTE[RK][AG]{I|L};[{I|L}A]GATE[RK][AG]{I|L};[{I|L}A]GA{[QC]|[C(Carbamidomethyl (C))A]}{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}{I|L} 6.8665;6.7043;6.307;6.1185;6.0223;5.8561;5.8217;5.4588;5.2743;5.1969 -;+;-;-;-;-;-;-;-;- + 1195 1 2.256 75714.4 0.5299999713897705 550 2889 3440 DOHH2_400M_050219_1,3441 DOHH2_400M_050219_1,3441,IAQERKTQL True True IAQERKTQL 16.708948 543.81700438261 530564.1875 3440.0 nc|ENSG00000100023|Q13356-2|PPIL2;;ENST00000462188.1_1_22:22049070-22049360:+|nuORF;;ENSG00000100023|ENST00000398831|PPIL2 6.164659023284912 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3444 16.729 800.0 127380.0 25 0 13403.0 + -1 EKLHTTKMK 9 131 566.3134534294203 1130.6123539256405 2 566.3140136599541 MULTI CID FTMS 0 0 0 3443 112329.84375 0.9790566254862694 1 -0.0302047729492187 1 Oxidation (M) _EKLHTTKM(Oxidation (M))K_ REV__ENST00000530363.5_1_16:81161532-81175087:-|nuORF;REV__ENST00000533478.5_1_16:81157348-81174942:-|nuORF;REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2;REV__nc|ENSG00000166473|Q7Z442|PKD1L2 17.11289562659939 0.3734572693229295 1 {[CT]|[{M(Oxidation (M))|F}G]}[KP]PP{I|L}T{M(Oxidation (M))|F}K 10 -1 + 59.663 0.0 0.0 5.2771 5.2771 87.481 0.0 0.0 0.0 7.35863111416478 34.60590582484414 7.35863111416478 12.989838610346837 0 1.5941876774005248 0.0 0.6861818737241735 0.3494850021680094 {[CT]|[{M(Oxidation (M))|F}G]}[KP]PP{I|L}T{M(Oxidation (M))|F}K;[HT]VG{I|L}[KT]T{M(Oxidation (M))|F}K;[KT]TA[HV]AE{M(Oxidation (M))|F}K;{[CT]|[{M(Oxidation (M))|F}G]}[KP]PP{I|L}GV[YG];[KT]T[RH]{I|L}GV[YG];[RH]EAP[{I|L}P][PS]K;[PS]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}AE{M(Oxidation (M))|F}K;[HT]VG{I|L}{[NV]|[RG]}VGVH;[RH]EA{[QV]|[N{I|L}]|[RA]|[KV]}RVH;[HT]VG{I|L}[KT]{[NV]|[RG]}Y 5.2771;4.1282;3.6167;3.2375;2.6348;1.9446;1.8952;1.6445;1.6185;1.4708 -;-;-;-;-;-;-;-;-;- 671 1 2.256 81182.3 0.5299999713897705 551 2891 3443 DOHH2_400M_050219_1,3444 DOHH2_400M_050219_1,3444,EKLHTTKMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3445 16.743 800.0 65786.0 25 0 2826.0 -1 0 78 733.068588210903 2928.245246977212 4 733.3190795779228 MULTI CID FTMS 0 0 0 3443 69049.921875 0.21972371620685 -3 0.0243816375732421 2 1 W 1 -1 21.99 0.0 0.0 0.75095 0.0 0.0 2724.155797979945 0.0 2724.155797979945 0.0 0.2237030067185941 0.0 0.0 0 0.5 0.0 0.0 0.0 W 0.75095 - 41 + 1 2.256 49667.6 0.4000000059604645 552 2891 3443 DOHH2_400M_050219_1,3445 DOHH2_400M_050219_1,3445, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3447 16.754 380.0 217040.0 25 0 97126.0 -1 0 78 472.2732449285645 471.2659684619645 1 472.2725402712822 MULTI CID FTMS 0 0 0 3446 140033.359375 0.8139560757336484 -2 0.0342655181884765 1 1 W 1 -1 13.495 0.0 0.0 2.8635 0.0 0.0 267.17638213559576 0.0 267.17638213559576 0.0 2.235790156711097 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.8635 - 14 + 1 2.256 71281.8 1.0 553 2892 3446 DOHH2_400M_050219_1,3447 DOHH2_400M_050219_1,3447, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3448 16.768 800.0 168960.0 25 0 17661.0 + 26421 NTDRNIDKY 9 140 569.777971543804 1137.541390154408 2 569.7781860232353 MULTI CID FTMS 0 0 0 3446 139485.53125 0.3092401878801298 -2 0.0342655181884765 2 Unmodified _NTDRNIDKY_ ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR 78.06048673739656 0.0179866705178931 1 {[QS]|[NT]}DRN{I|L}DKY 9 0 + 67.075 0.0 0.0 5.8965 5.8965 88.317 0.0 0.0 0.0 13.211411757504322 14.973024840566474 13.211411757504322 9.208187539523756 0 1.548455006504028 1.5228787452803376 0.763632853717045 1.2104093769761877 + + {[QS]|[NT]}DRN{I|L}DKY;{[QS]|[NT]}DRGG{I|L}DKY;AAT{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}DKY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}DKY;{[QD]|[EN]|[WG]|[KD]|[RS]}[EP]M{I|L}DKY;AAT{[QD]|[EN]|[WG]|[KD]|[RS]}GG{I|L}DKY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}GG{I|L}DKY;[AG]SDRN{I|L}DKY;AAT[EP]M{I|L}DKY;{[QS]|[NT]}[QA]W{I|L}DKY 5.8965;5.087;4.7351;4.5647;4.3;3.9294;3.7552;3.7131;3.5813;3.5252 +;-;-;-;-;-;-;-;-;- + 1434 1 2.256 103276.9 0.5899999737739563 554 2892 3446 DOHH2_400M_050219_1,3448 DOHH2_400M_050219_1,3448,NTDRNIDKY True True NTDRNIDKY 16.767758 569.778186023235 1938220.0 3446.0 ENSG00000163946|ENST00000683822|TASOR;;nc|ENSG00000163946|Q9UK61-4|TASOR;;nc|ENSG00000163946|Q9UK61-3|TASOR 6.140083948771159 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3449 16.782 800.0 215750.0 25 0 24178.0 + 30478 REDDSVHAY 9 128 546.2407516148991 1090.466950296598 2 546.2415038943291 MULTI CID FTMS 0 0 0 3446 126943.421875 0.817829934541425 -2 0.0342655181884765 3 Unmodified _REDDSVHAY_ ENSG00000167136|ENST00000372642|ENDOG 29.84058131909904 0.1515068451768857 1 DSVHAY 6 3 54.513 0.0 0.0 4.9991 0.0 0.0 400.1705799787125 0.0 400.1705799787125 0.0 39.02880645020623 0.0 0.0 0 1.2302046884880935 0.0 0.6549471895720985 0.0 + DSVHAY 4.9991 + + 170 1 2.256 130777.5 0.5600000023841858 555 2892 3446 DOHH2_400M_050219_1,3449 DOHH2_400M_050219_1,3449,REDDSVHAY False True REDDSVHAY 16.781589 546.241503894329 725844.9375 3446.0 ENSG00000167136|ENST00000372642|ENDOG 7.233741601308186 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3450 16.795 800.0 105690.0 25 0 13923.0 + 6035 DSDRYRDGY 9 99 573.7443462516214 1145.4741395700428 2 573.7441894412041 MULTI CID FTMS 0 0 0 3446 96433.65625 1.0 0 0.0 4 Unmodified _DSDRYRDGY_ ENSG00000063046|ENST00000262056|EIF4B;nc|ENSG00000063046|P23588-2|EIF4B 31.26834338654808 0.1333407332142048 1 DSDRY[RD]GY 9 0 + 51.563 0.0 0.0 4.5015 4.5015 86.576 0.0 0.0 0.0 22.113037394097432 16.478174818886373 16.478174818886373 23.7101498947667 0 0.718765315847925 1.0 0.4247425010840047 0.3807196863200844 + + DSDRY[RD]GY;Y[Y{M(Oxidation (M))|F}]Y[RD]GY 4.5015;2.4316 +;- + 68 + 1 2.256 67959.7 0.4900000095367431 556 2892 3446 DOHH2_400M_050219_1,3450 DOHH2_400M_050219_1,3450,DSDRYRDGY False True DSDRYRDGY 16.79542 573.744189441204 334529.40625 3446.0 ENSG00000063046|ENST00000262056|EIF4B;;nc|ENSG00000063046|P23588-2|EIF4B 6.869215170542399 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3452 16.8 97.0 527100.0 25 0 37785.0 + 26422 NTDRNIDKY 9 102 380.1881008756239 1137.5424732270717 3 380.1884033083916 MULTI CID FTMS 0 0 0 3451 516463.21875 0.8829257417681399 -1 0.0521755218505859 1 Unmodified _NTDRNIDKY_ ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR 18.1463463914782 0.3454829746528889 1 GG[NG]KWNDK 9 7 24.459 0.0 0.0 2.1502 0.0 0.0 0.0 178.05115686588127 178.05115686588127 9.476708856926988 0.0 0.0 0.0 0 0.2742275032520141 1.3979400086720375 0.0 0.0 GG[NG]KWNDK 2.1502 - 128 + 1 2.256 45504.8 1.0 557 2893 3451 DOHH2_400M_050219_1,3452 DOHH2_400M_050219_1,3452,NTDRNIDKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3453 16.807 383.0 180370.0 25 0 20319.0 + 4096 DANSRTSQL 9 101 496.2438426832442 990.4731324332884 2 496.2444030642509 MULTI CID FTMS 0 0 0 3451 249275.140625 0.5902709755752656 -3 0.0864410400390625 2 Unmodified _DANSRTSQL_ ENSG00000095015|ENST00000399503|MAP3K1 63.22749603027936 0.0242951379232427 1 {[DA]|[EG]}NK 4 6 50.445 0.0 0.0 5.0931 0.0 0.0 0.0 559.2587374322874 559.2587374322874 15.491727930838266 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.8494850021680094 {[DA]|[EG]}NK 5.0931 - 179 + 1 2.256 56408.1 1.0 558 2893 3451 DOHH2_400M_050219_1,3453 DOHH2_400M_050219_1,3453,DANSRTSQL True True DANSRTSQL 16.807074 496.244403064251 4716011.5 3451.0 ENSG00000095015|ENST00000399503|MAP3K1 6.999687989552816 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3454 16.812 269.0 174020.0 25 0 6364.1 + 8803 EWWLHYYSEDY 11 89 795.8307190075058 1589.6468850818114 2 795.8307372927666 MULTI CID FTMS 0 0 0 3451 222824.734375 0.7109934086652475 -1 0.0521755218505859 3 Unmodified _EWWLHYYSEDY_ REV__ENST00000547733.1_1_12:39687284-39687350:-|nuORF 13.042465956692816 0.7638483625850725 1 [HM]GGGSGY[SG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NGSY 16 -1 + 98.969 0.0 0.0 6.2258 6.2258 78.191 0.0 0.0 0.0 71.57312836760731 3.226825097560422 3.226825097560422 0.2632893872234945 0 1.25 0.0 1.9916440611282624 0.0 [HM]GGGSGY[SG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NGSY;[HM]GGGSGY[SG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGGSY;[HM]NGSGY[SG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NGSY;[HM]GGGSGY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GSNGSY;[HM]GNSGY[SG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGGSY;[HM]NGSGY[SG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGGSY;[HM]GGGSGY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GSGGGSY;[HM]NGSGY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GSNGSY;[HM]NGSGY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GSGGGSY;[HM]GNSGY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GSGGGSY 6.2258;6.2093;6.1183;6.1027;6.1007;6.1007;6.0861;5.9951;5.9775;5.9775 -;-;-;-;-;-;-;-;-;- 14471 + 1 2.256 39516.7 1.0 559 2893 3451 DOHH2_400M_050219_1,3454 DOHH2_400M_050219_1,3454,EWWLHYYSEDY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3455 16.821 528.0 159510.0 25 0 14260.0 + 29122 QESGPSAEKY 10 115 548.2515510418087 1094.4885491504174 2 548.2509033083916 MULTI CID FTMS 0 0 0 3451 107428.1015625 0.5838466427791698 -3 0.0864410400390625 4 Unmodified _QESGPSAEKY_ ENSG00000165775|ENST00000369498|FUNDC2;ENST00000484175.5_1_X:154255538-154282944:+|nuORF 69.33821966488729 0.0189579340102328 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SGPSAEKY 10 0 + 60.526 0.0 0.0 5.5301 5.5301 89.145 0.0 0.0 0.0 26.45455478684795 13.521825181113629 13.521825181113629 15.779097852729931 0 0.805462187404089 0.0 1.305462187404089 0.2742275032520141 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SGPSAEKY;[DP]DG[{I|L}V]PGYY;[VG]TA[HM]PGYY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[QC]|[C(Carbamidomethyl (C))A]}AEKY;[QT]V[HM]PGYY;[PG]{[{M(Oxidation (M))|F}H]|[RQ]}ASPGYY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Y{M(Oxidation (M))|F}]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y;[DP]DG[HV][RH]Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[SG]Q[HT]KY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SGPSA[WH]P 5.5301;4.0884;3.5634;3.5109;2.5394;2.4969;2.265;2.1833;2.1829;2.17 +;-;-;-;-;-;-;-;-;- + 691 + 1 2.256 71064.9 1.0 560 2893 3451 DOHH2_400M_050219_1,3455 DOHH2_400M_050219_1,3455,QESGPSAEKY True True QESGPSAEKY 16.821378 548.2517 969296.0625 3451.0 ENST00000484175.5_1_X:154255538-154282944:+|nuORF;;ENSG00000165775|ENST00000369498|FUNDC2 8.021514892578125 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3456 16.835 777.0 197170.0 25 0 43249.0 + 7838 ELKQWKGL 8 117 501.2905154519101 1000.5664779706202 2 501.2894470095634 MULTI CID FTMS 0 0 0 3451 92733.203125 0.7690300244907088 -1 0.0521755218505859 5 Unmodified _ELKQWKGL_ REV__ENSG00000176142|ENST00000319172|TMEM39A;REV__ENST00000468545.1_1_3:119155636-119156697:-|nuORF 57.47134341890925 0.1146309765603773 1 {[QN]|[E{I|L}]|[KN]}K{[QD]|[EN]|[WG]|[KD]|[RS]}KQ{I|L} 8 -1 + 67.447 0.0 0.0 6.7409 6.7409 90.924 0.0 0.0 0.0 9.229098458022804 9.229098458022804 9.229098458022804 9.229098458022804 0 1.1595680409956015 2.0 1.1861818737241734 0.7614393726401688 {[QN]|[E{I|L}]|[KN]}K{[QD]|[EN]|[WG]|[KD]|[RS]}KQ{I|L};E{I|L}K[RH][YR];{[QN]|[E{I|L}]|[KN]}K{[QD]|[EN]|[WG]|[KD]|[RS]}K[AG]{I|L};E{I|L}K{M(Oxidation (M))|F}[{I|L}P]{[SA]|[TG]}P;[K{I|L}]E{[QD]|[EN]|[WG]|[KD]|[RS]}KQ{I|L};[{I|L}T][VG]{[QD]|[EN]|[WG]|[KD]|[RS]}KQ{I|L};[K{I|L}]E{[QD]|[EN]|[WG]|[KD]|[RS]}K[AG]{I|L};E{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VG]VP;{[QS]|[NT]}{[RE]|[WV]}{I|L}KQ{I|L};{[ET]|[MV]}[RN]{I|L}KQ{I|L} 6.7409;5.8185;5.8152;4.24;3.6941;3.657;2.7684;2.4988;1.9042;1.8585 -;-;-;-;-;-;-;-;-;- 231 1 2.256 120603.5 1.0 561 2893 3451 DOHH2_400M_050219_1,3456 DOHH2_400M_050219_1,3456,ELKQWKGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3458 16.843 259.0 274540.0 25 0 92322.0 -1 0 69 437.2313521749277 436.2240757083277 1 437.2306701540947 MULTI CID FTMS 0 0 0 3457 171527.625 0.715715209739044 -10 0.2592296600341797 1 1 W 1 -1 14.604 0.0 0.0 3.3478 0.0 0.0 232.1342147237558 0.0 232.1342147237558 0.0 9.119543704721591 0.0 0.0 0 0.0 0.0 0.0 0.0 W 3.3478 - 10 + 1 2.256 62642.0 1.0 562 2894 3457 DOHH2_400M_050219_1,3458 DOHH2_400M_050219_1,3458, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3459 16.857 800.0 104340.0 25 0 7140.6 + 18058 KTDLHNEGY 9 128 538.7537996671131 1075.493046401026 2 538.7538940310478 MULTI CID FTMS 0 0 0 3457 71273.8203125 0.0184245692854438 19 -0.3749198913574219 2 Unmodified _KTDLHNEGY_ ENSG00000131378|ENST00000334133|RFTN1 18.373094154950223 0.3393451798331396 1 {[ES]|[DT]|[{I|L}C]}K{I|L}HNWY 8 4 {[ES]|[DT]|[{I|L}C]}K{I|L}HNW + + 16.99 14.256 1.5939 1.5797 1.5797 48.596 0.0 0.0 0.0 0.0 -16.18562527100117 -16.18562527100117 0.0 0 0.0 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}K{I|L}HNWY 1.5797 - 498 + 1 2.256 67039.1 0.4699999988079071 563 2894 3457 DOHH2_400M_050219_1,3459 DOHH2_400M_050219_1,3459,KTDLHNEGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3460 16.868 589.0 272600.0 25 0 39818.0 + 45410 YTDATSKY 8 128 474.7192655868318 947.4239782404636 2 474.7191345095634 MULTI CID FTMS 0 0 0 3457 217213.953125 0.8823565851677927 -3 0.121774673461914 3 Unmodified _YTDATSKY_ ENSG00000102580|ENST00000602402|DNAJC3 62.57269311338072 0.1158273023829763 1 YTDATSKY 8 0 + 82.037 0.0 0.0 8.6589 8.6589 88.89 0.0 0.0 0.0 31.638568026386693 5.166297960033361 5.166297960033361 5.166297960033361 0 0.8098943791441969 1.5228787452803376 0.805462187404089 0.0 + + YTDATSKY;YTDATSYK;YTDA[RH]W;YTDA[{I|L}P][DG]P;YT[EP]{I|L}YY;{[DA]|[EG]}[{I|L}P]TAD[{M(Oxidation (M))|F}V];{[DA]|[EG]}T[{I|L}P]AD[{M(Oxidation (M))|F}V];{[ES]|[DT]|[{I|L}C]}A[{I|L}P]AD[{M(Oxidation (M))|F}V];{[SA]|[TG]}E[{I|L}P]AD[{M(Oxidation (M))|F}V];{[DA]|[EG]}TG{I|L}[EP][{M(Oxidation (M))|F}V] 8.6589;8.1136;6.8111;5.3401;4.1077;3.3106;3.2823;2.322;2.2268;0.75127 +;-;-;-;-;-;-;-;-;- + 377 + 1 2.256 123899.0 1.0 564 2894 3457 DOHH2_400M_050219_1,3460 DOHH2_400M_050219_1,3460,YTDATSKY True True YTDATSKY 16.867615 474.719134509563 1203806.625 3457.0 ENSG00000102580|ENST00000602402|DNAJC3 7.990994930267334 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3461 16.881 800.0 79179.0 25 0 4780.9 + 6882 EEEKPQTTY 9 102 562.7588269869259 1123.5031010406517 2 562.7586547732353 MULTI CID FTMS 0 0 0 3457 94146.2890625 1.0 0 0.0 4 Unmodified _EEEKPQTTY_ ENSG00000170464|ENST00000302060|DNAJC18 17.11289562659939 0.3734572693229295 1 EEEK 4 5 23.689 0.0 0.0 2.1085 0.0 0.0 0.0 605.2584322565061 605.2584322565061 2.720136122529606 0.0 0.0 0.0 0 0.2887254899964357 1.3010299956639813 0.0 0.0 + EEEK 2.1085 + + 256 + 1 2.256 52349.5 0.4799999892711639 565 2894 3457 DOHH2_400M_050219_1,3461 DOHH2_400M_050219_1,3461,EEEKPQTTY False True EEEKPQTTY 16.881449 562.758654773235 470528.03125 3457.0 ENSG00000170464|ENST00000302060|DNAJC18 6.388181845347087 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3463 16.895 640.0 174920.0 25 0 24583.0 27527 PKTHLLAF 8 105 463.7748608468975 925.5351687605952 2 463.7742797732353 MULTI CID FTMS 0 0 0 3462 133183.28125 0.8188085631414196 -3 0.1382122039794922 1 Unmodified _PKTHLLAF_ ENSG00000064205|ENST00000190983|CCN5;ENST00000497421.1_1_20:43344031-43348789:+|nuORF;nc|ENSG00000064205|O76076-2|CCN5 18.13498045792455 0.6430038125133779 1 KPTH 4 6 40.222 0.0 0.0 4.3458 0.0 0.0 0.0 459.2567843072876 459.2567843072876 23.49993446776488 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 KPTH 4.3458 - 66 + 1 2.256 87481.5 1.0 566 2895 3462 DOHH2_400M_050219_1,3463 DOHH2_400M_050219_1,3463,PKTHLLAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3464 16.903 413.0 309260.0 25 0 15175.0 + -1 NESDGKSRW 9 136 360.1694830978685 359.16220663126853 1 360.1676818728447 MULTI CID FTMS 0 0 0 3462 117510.171875 0.9781529843211878 1 -0.0487422943115234 2 ENSG00000146476|ENST00000367294|ARMT1 1 W 1 -1 10.089 0.0 0.0 2.8089 0.0 0.0 155.07205572970446 0.0 155.07205572970446 0.0 1.2662860693398983 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.8089 - 24 + 1 2.256 104310.0 1.0 567 2895 3462 DOHH2_400M_050219_1,3464 DOHH2_400M_050219_1,3464, False False NESDGKSRW 16.902515 360.167681872845 782182.375 3462.0 ENSG00000146476|ENST00000367294|ARMT1 4.533292770385742 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3465 16.916 800.0 160250.0 25 0 26512.0 + 38039 TPDPPLAPSR 10 117 525.7839098043993 1049.5532666755985 2 525.7844116091728 MULTI CID FTMS 0 0 0 3462 104567.5 0.2639501140784227 -8 0.2080898284912109 3 Unmodified _TPDPPLAPSR_ REV__ENSG00000187902|ENST00000376325|SHISA7;REV__ENST00000416792.1_3_19:55944525-55949973:-|nuORF 20.41453444215458 0.5050059513928961 1 TP{I|L}[WP]K 6 -1 33.319 0.0 0.0 3.1746 0.0 0.0 309.1356854451091 0.0 309.1356854451091 0.0 17.834778045573074 0.0 0.0 0 1.916386562212267 0.0 0.4247425010840047 0.3252574989159953 TP{I|L}[WP]K 3.1746 - 291 + 1 2.256 103097.4 0.5 568 2895 3462 DOHH2_400M_050219_1,3465 DOHH2_400M_050219_1,3465,TPDPPLAPSR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3466 16.93 800.0 242330.0 25 0 12892.0 + 30069 QVDHADGLEK 10 136 556.2725644344841 1110.5305759357682 2 556.2732421755791 MULTI CID FTMS 0 0 0 3462 106193.140625 0.0813646940615356 -8 0.2080898284912109 4 Unmodified _QVDHADGLEK_ REV__ENSG00000163492|ENST00000443758|CCDC141;REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141 65.47368725323818 0.0222277162070287 1 [DV]QHVDAAEK 10 -1 + 128.74 0.0 0.0 11.593 11.593 90.043 0.0 0.0 0.0 1.5629594754377365 1.5629594754377365 1.5629594754377365 5.242275032520126 0 3.7302046884880937 1.5228787452803376 1.298455006504028 1.411954370472159 [DV]QHVDAAEK;[DV]HQVDAAEK;[DV][AG]HVDAAEK;[DV]AGHVDAAEK;[DV]QHVADAEK;[DV]HAGVDAAEK;[DV]AHGVDAAEK;[DV][AG]HVADAEK;[HV]DQVDAAEK;{[NV]|[RG]}EHVDAAEK 11.593;11.121;10.627;10.1;9.9531;9.8119;9.2698;9.1278;9.0368;8.7546 -;-;-;-;-;-;-;-;-;- 5164 1 2.256 151853.5 0.5199999809265137 569 2895 3462 DOHH2_400M_050219_1,3466 DOHH2_400M_050219_1,3466,QVDHADGLEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3469 16.94 162.0 420820.0 25 0 107120.0 + 36594 TAMKKGETL 9 68 489.7674816998697 977.5204104665394 2 489.7681152224541 MULTI CID FTMS 0 0 0 3468 338114.03125 0.4241484649326036 -6 0.2212238311767578 1 Unmodified _TAMKKGETL_ ENSG00000165732|ENST00000354185|DDX21 23.78978130925829 0.2284941198415988 1 TAMKG 5 4 63.711 0.0 0.0 6.5177 0.0 0.0 0.0 486.2528170221313 486.2528170221313 44.89909385331508 0.0 0.0 0.0 0 0.5752574989159953 2.0 0.0 0.0 TAMKG 6.5177 - 61 + 1 2.256 57656.8 1.0 570 2897 3468 DOHH2_400M_050219_1,3469 DOHH2_400M_050219_1,3469,TAMKKGETL False True TAMKKGETL 16.939979 489.768115222454 3575276.5 3468.0 ENSG00000165732|ENST00000354185|DDX21 6.382689476013184 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3470 16.944 204.0 283910.0 25 0 37452.0 + -1 IQRLETMK 8 70 517.7867407916422 1033.5589286500842 2 517.7868530154228 MULTI CID FTMS 0 0 0 3468 206437.8125 0.2091984740124966 -21 0.4322376251220703 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 1 T{M(Oxidation (M))|F}K 3 -1 32.536 0.0 0.0 3.148 0.0 0.0 639.3716860737155 0.0 639.3716860737155 0.0 14.278259348524356 0.0 0.0 0 1.0 0.0 0.0 0.2614393726401688 T{M(Oxidation (M))|F}K 3.148 + + 145 + 1 2.256 48293.3 1.0 571 2897 3468 DOHH2_400M_050219_1,3470 DOHH2_400M_050219_1,3470,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3471 16.948 223.0 274700.0 25 0 26208.0 + 4766 DEITGKKGY 9 89 505.7615024172499 1009.5084519012998 2 505.7616454958916 MULTI CID FTMS 0 0 0 3468 223211.15625 0.7875453780164494 -4 0.1388435363769531 3 Unmodified _DEITGKKGY_ ENSG00000159256|ENST00000400485|MORC3 34.40172386719151 0.1061884637610825 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}T[KG]KGY 9 0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} + + 32.117 5.2288 2.1423 3.1815 3.1815 50.869 0.0 0.0 0.0 0.0 21.0081775995951 0.0 0.0 0 1.16944517631652 0.0 0.0 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}T[KG]KGY 3.1815 + + 136 + 1 2.256 55269.5 1.0 572 2897 3468 DOHH2_400M_050219_1,3471 DOHH2_400M_050219_1,3471,DEITGKKGY True True DEITGKKGY 16.948067 505.761645495892 1529657.75 3468.0 ENSG00000159256|ENST00000400485|MORC3 7.160494327545166 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3473 16.96 527.0 190950.0 25 0 24495.0 + -1 LTGWPLTMK 9 87 531.7841938794123 1061.5538348256246 2 531.7842895388603 MULTI CID FTMS 0 0 0 3472 155928.40625 0.3671332424840168 -10 0.2594127655029297 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 34.40172386719151 0.1061884637610825 1 KTT{I|L}PS[HS]K 9 -1 52.833 0.0 0.0 4.9769 0.0 0.0 63.99854758665999 0.0 63.99854758665999 0.0 36.49674684468792 0.0 0.0 0 1.305462187404089 0.0 1.3494850021680094 0.3252574989159953 KTT{I|L}PS[HS]K 4.9769 - 643 + 1 2.256 79432.5 1.0 573 2898 3472 DOHH2_400M_050219_1,3473 DOHH2_400M_050219_1,3473,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3474 16.97 578.0 191990.0 25 0 29264.0 31451 RPQVVNAL 8 107 448.7693636062813 895.5241742793627 2 448.7689086794853 MULTI CID FTMS 0 0 0 3472 164354.578125 0.7793675624406927 -3 0.0666141510009765 2 Unmodified _RPQVVNAL_ ENSG00000149633|ENST00000279024|KIAA1755 10.183394434864962 0.7604730176254005 1 KP 2 7 29.024 0.0 0.0 3.241 0.0 0.0 0.0 667.3521057279389 667.3521057279389 13.539171939081172 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 KP 3.241 - 34 + 1 2.256 92040.8 1.0 574 2898 3472 DOHH2_400M_050219_1,3474 DOHH2_400M_050219_1,3474,RPQVVNAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3478 16.992 657.0 118410.0 25 0 5690.0 + 7110 EEMKKGSQF 9 127 542.2598114465428 1082.5050699598855 2 542.2600585818291 MULTI CID FTMS 0 0 0 3477 89946.8203125 0.246898053421727 -5 0.0479602813720703 1 Unmodified _EEMKKGSQF_ ENSG00000136628|ENST00000366923|EPRS1 36.12702656103203 0.0967173616627612 1 KM[HC] 4 8 21.427 0.0 0.0 1.9794 0.0 0.0 565.285936424025 0.0 565.285936424025 0.0 2.776428057751655 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3807196863200844 KM[HC] 1.9794 - 227 1 2.256 64040.4 1.0 575 2901 3477 DOHH2_400M_050219_1,3478 DOHH2_400M_050219_1,3478,EEMKKGSQF True True EEMKKGSQF 16.992154 542.260058581829 1704357.875 3477.0 ENSG00000136628|ENST00000366923|EPRS1 6.25839885075887 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3479 16.997 269.0 273640.0 25 0 19375.0 + 6981 EEIKKNYRY 9 97 414.88745771955934 1241.640543758878 3 414.8873779177666 MULTI CID FTMS 0 0 0 3477 184191.515625 0.7612615070647312 -2 0.0081329345703125 2 Unmodified _EEIKKNYRY_ ENSG00000106477|ENST00000223208|CEP41;ENST00000482730.1_1_7:130051992-130056799:-|nuORF;ENST00000498527.5_1_7:130050951-130080846:-|nuORF;nc|ENSG00000106477|Q9BYV8-2|CEP41 49.93300154707207 0.0405168250806675 1 EE{I|L}KKNYRY 9 0 EE + + 46.425 17.28 6.6952 3.739 3.739 52.409 0.0 0.0 0.0 0.0 29.12349941994276 0.0 0.0 0 0.6643943297944485 0.0 0.0 0.805462187404089 + + EE{I|L}KKNYRY 3.739 + + 236 + 1 2.256 66288.7 1.0 576 2901 3477 DOHH2_400M_050219_1,3479 DOHH2_400M_050219_1,3479,EEIKKNYRY True True EEIKKNYRY 16.997115 414.887377917767 1110426.125 3477.0 ENST00000498527.5_1_7:130050951-130080846:-|nuORF;;ENST00000482730.1_1_7:130051992-130056799:-|nuORF;;nc|ENSG00000106477|Q9BYV8-2|CEP41;;ENSG00000106477|ENST00000223208|CEP41 4.187867403030396 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3480 17.008 636.0 181560.0 25 0 24560.0 + 43751 YEDIAQKS 8 122 477.2324935060759 952.4504340789516 2 477.2329284548759 MULTI CID FTMS 0 0 0 3477 107863.75 0.5241028964412253 -2 0.0081329345703125 3 Unmodified _YEDIAQKS_ ENSG00000167768|ENST00000252244|KRT1 41.95555342248728 0.2015749177957339 1 YED{I|L}AQKS 8 0 + 78.683 0.0 0.0 8.2611 8.2611 93.959 0.0 0.0 0.0 60.667473585186784 10.401542080780317 10.401542080780317 9.262137858390815 0 0.9247425010840048 2.0 0.3494850021680094 0.9802046884880936 + + YED{I|L}AQKS;YED{I|L}A[AG]KS;YE[{I|L}A]DQKS;YE{[DS]|[MA]|[CV]|TT}PQKS;YE[{I|L}A]D[AG]KS;YED{I|L}A[VP]{M(Oxidation (M))|F};YE{[DS]|[MA]|[CV]|TT}P[AG]KS;YE[{I|L}A]D[VP]{M(Oxidation (M))|F};YE{[DS]|[MA]|[CV]|TT}P[VP]{M(Oxidation (M))|F};YE[{I|L}A]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TP 8.2611;7.2886;6.6741;5.8071;5.7016;5.6997;4.8347;4.1127;3.2458;2.9557 +;-;-;-;-;-;-;-;-;- + 229 + 1 2.256 93712.4 1.0 577 2901 3477 DOHH2_400M_050219_1,3480 DOHH2_400M_050219_1,3480,YEDIAQKS False True YEDIAQKS 17.008192 477.232928454876 1011644.0 3477.0 ENSG00000167768|ENST00000252244|KRT1 5.572482744852702 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3481 17.022 800.0 22916.0 25 0 3287.6 -1 0 38 733.068588210903 2928.245246977212 4 733.3186523318291 MULTI CID FTMS 0 0 0 3477 111895.8203125 0.3560636246856931 7 -0.1489410400390625 4 1 W 1 -1 21.99 0.0 0.0 0.75095 0.0 0.0 2724.155309698695 0.0 2724.155309698695 0.0 16.505149978319906 0.0 0.0 0 0.5 0.0 0.0 0.0 W 0.75095 - 6 + 1 2.256 23750.2 0.4600000083446502 578 2901 3477 DOHH2_400M_050219_1,3481 DOHH2_400M_050219_1,3481, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3483 17.04 800.0 75225.0 25 0 5867.9 + 5274 DKVDHFSYK 9 98 569.777971543804 1137.541390154408 2 569.7780639529228 MULTI CID FTMS 0 0 0 3482 49449.9140625 0.1096307307166941 8 -0.1130352020263671 1 Unmodified _DKVDHFSYK_ REV__ENSG00000173821|ENST00000582970|RNF213;REV__nc|ENSG00000173821|Q63HN8-4|RNF213;REV__nc|ENSG00000173821|Q63HN8|RNF213 13.90604991867851 0.4602628045680013 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP]DYK 9 -1 + 22.438 0.0 0.0 1.9725 1.9725 68.251 0.0 0.0 0.0 0.8210312463826064 8.458246460780575 0.8210312463826064 1.8509067237356085 0 0.6989700043360187 0.0 0.4247425010840047 0.3807196863200844 {[QD]|[EN]|[WG]|[KD]|[RS]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP]DYK;[QP][YV][EP]DYK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[ET]|[MV]}[EP]DYK;[QP][KS]{[WS]|[C(Carbamidomethyl (C)){I|L}]}DYK;{[QS]|[NT]}[KP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}DYK;AAT{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP]DYK;{[QD]|[EN]|[WG]|[KD]|[RS]}YY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YK;{[{M(Oxidation (M))|F}H]|[RQ]}{[RE]|[WV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YK;{[{M(Oxidation (M))|F}H]|[RQ]}{[RE]|[WV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KY;AAP[{M(Oxidation (M))|F}T][EP]DYK 1.9725;1.8098;1.5755;1.2805;1.155;1.1535;1.1422;1.0119;0.64778;0.25083 -;-;-;-;-;-;-;-;-;- 140 1 2.256 51261.9 0.4600000083446502 579 2902 3482 DOHH2_400M_050219_1,3483 DOHH2_400M_050219_1,3483,DKVDHFSYK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3484 17.052 715.0 174040.0 25 0 27045.0 + 2867 AVDPQHNGY 9 124 500.7278291418153 999.4411053504308 2 500.7277099490166 MULTI CID FTMS 0 0 0 3482 153168.203125 0.2297017559448324 -12 0.3130435943603515 2 Unmodified _AVDPQHNGY_ ENSG00000170145|ENST00000304987|SIK2 74.42276476219924 0.019389277360085 1 {[VA]|[{I|L}G]}DPQHNGY 9 0 + 72.947 0.0 0.0 7.2987 7.2987 91.472 0.0 0.0 0.0 50.03160730965476 9.921525057367404 9.921525057367404 9.208187539523747 0 0.9247425010840048 2.0 0.0 1.610924374808178 + + {[VA]|[{I|L}G]}DPQHNGY;{[VA]|[{I|L}G]}DP[AG]HNGY;{[VA]|[{I|L}G]}DPQHGGGY;{[VA]|[{I|L}G]}DPQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DP];{[VA]|[{I|L}G]}D[HT]Q[SG]W;{[VA]|[{I|L}G]}DP[AG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DP];{[VA]|[{I|L}G]}D[HQ]T[SG]W;{[VA]|[{I|L}G]}D[HQ]PNGY;{[VA]|[{I|L}G]}DP[AG]HGGGY;{[VA]|[{I|L}G]}D[HQ]PGGGY 7.2987;6.3774;6.0718;5.9361;5.1988;5.0147;4.8395;4.7417;3.8486;3.8204 +;-;-;-;-;-;-;-;-;- + 1485 + 1 2.256 101219.9 1.0 580 2902 3482 DOHH2_400M_050219_1,3484 DOHH2_400M_050219_1,3484,AVDPQHNGY True True AVDPQHNGY 17.052119 500.727709949017 7525604.5 3482.0 ENSG00000170145|ENST00000304987|SIK2 8.533095995585123 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3485 17.059 403.0 350050.0 25 0 36268.0 + 370 AEDKENYKKF 10 136 424.5472325847877 1270.619868354563 3 424.5473510622978 MULTI CID FTMS 0 0 0 3482 101665.5390625 0.0484814235205903 -11 0.3089828491210937 3 Unmodified _AEDKENYKKF_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 90.13494162714682 0.0093239051209448 1 AEDKENYKK{M(Oxidation (M))|F} 10 0 + 109.24 0.0 0.0 8.5976 8.5976 83.726 0.0 0.0 0.0 32.01667520279372 1.0692362949193637 1.0692362949193637 1.0692362949193637 0 0.9749073637206092 1.6989700043360187 0.8494850021680094 1.4604093769761874 + + AEDKENYKK{M(Oxidation (M))|F};AEDKENYK{M(Oxidation (M))|F}K;AEDKEGGYKK{M(Oxidation (M))|F};AEDKEGGYK{M(Oxidation (M))|F}K;[TA]AE[YN]KKE{M(Oxidation (M))|F}A;[TA]AE[YN]KEK{M(Oxidation (M))|F}A;{[HG]|PP}VKYNE[EP]QA;[TA]AE[YN]K[Y{I|L}]QA;AATE[YN]KKE{M(Oxidation (M))|F}A;AATE[YN]KEK{M(Oxidation (M))|F}A 8.5976;8.5134;7.8763;7.7922;4.2928;4.2547;3.3123;2.9958;2.9474;2.9093 +;-;-;-;-;-;-;-;-;- + 3976 + 1 2.256 114721.1 1.0 581 2902 3482 DOHH2_400M_050219_1,3485 DOHH2_400M_050219_1,3485,AEDKENYKKF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3487 17.067 291.0 145600.0 25 0 9826.8 + 4097 DANSRTSQL 9 89 496.2438426832442 990.4731324332884 2 496.2437011599541 MULTI CID FTMS 0 0 0 3486 135408.328125 0.3206400997025189 7 -0.0757408142089843 1 Unmodified _DANSRTSQL_ ENSG00000095015|ENST00000399503|MAP3K1 24.99096001346401 0.2132109383330889 1 {[DA]|[EG]}N 3 6 38.2 0.0 0.0 3.8567 0.0 0.0 0.0 687.3438204400999 687.3438204400999 5.561799739838875 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.4247425010840047 + {[DA]|[EG]}N 3.8567 + + 57 + 1 2.256 39663.1 1.0 582 2903 3486 DOHH2_400M_050219_1,3487 DOHH2_400M_050219_1,3487,DANSRTSQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3488 17.081 800.0 117980.0 25 0 16246.0 + 372 AEDKENYKKF 10 90 636.3170612985629 1270.6195696639256 2 636.3179199099541 MULTI CID FTMS 0 0 0 3486 102520.1875 0.2023720614253453 -10 0.2638969421386719 2 Unmodified _AEDKENYKKF_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 115.05908914016896 0.0010566098934358 1 {[CP]|[EA]}DKENYKK{M(Oxidation (M))|F} 10 0 + 101.42 0.0 0.0 7.9817 7.9817 92.007 0.0 0.0 0.0 4.884381005764311 65.3733390818893 4.884381005764311 9.164539485499262 0 3.2198565171985374 0.0 0.7302046884880937 1.031234684152075 + + {[CP]|[EA]}DKENYKK{M(Oxidation (M))|F};{[CP]|[EA]}DKEGGYKK{M(Oxidation (M))|F};[TA]A{[CP]|[EA]}ENYKK{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AKENYKK{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AKEGGYKK{M(Oxidation (M))|F};[TA]A{[CP]|[EA]}EGGYKK{M(Oxidation (M))|F};{[CP]|[EA]}WWNYKK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{[TV]|[{I|L}S]}ENYKK{M(Oxidation (M))|F};{[CP]|[EA]}[PG]{[MS]|[{M(Oxidation (M))|F}A]}NYKK{M(Oxidation (M))|F};{[CP]|[EA]}DK{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KK{M(Oxidation (M))|F} 7.9817;7.2604;7.1867;7.1462;6.425;6.2123;6.1727;5.976;5.7286;5.3972 +;-;-;-;-;-;-;-;-;- + 1742 1 2.256 75006.2 0.4799999892711639 583 2903 3486 DOHH2_400M_050219_1,3488 DOHH2_400M_050219_1,3488,AEDKENYKKF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3489 17.095 800.0 94425.0 25 0 26579.0 8585 ETSRRYNPGSE 11 55 648.302293354349 1294.590033775498 2 648.3015624880791 MULTI CID FTMS 0 0 0 3486 85385.0 0.9022471727382216 -4 0.0892906188964843 3 Unmodified _ETSRRYNPGSE_ ENSG00000025434|ENST00000441012|NR1H3;nc|ENSG00000025434|Q13133-2|NR1H3;nc|ENSG00000025434|Q13133-3|NR1H3 14.40537977576856 0.7354982482299568 1 T[DV]E 4 9 20.445 0.0 0.0 1.5793 0.0 0.0 832.37895400215 0.0 832.37895400215 0.0 1.8618187372417336 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T[DV]E 1.5793 - 30 1 2.256 59749.9 0.4399999976158142 584 2903 3486 DOHH2_400M_050219_1,3489 DOHH2_400M_050219_1,3489,ETSRRYNPGSE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3492 17.106 169.0 422380.0 25 0 62523.0 36922 TETDLRNHFY 10 72 432.537537685304 1294.590783656112 3 432.5371581912041 MULTI CID FTMS 0 0 0 3491 233810.828125 0.9420321258922504 -6 0.1287174224853515 1 Unmodified _TETDLRNHFY_ ENSG00000086589|ENST00000199814|RBM22;nc|ENSG00000086589|Q9NW64-2|RBM22 17.11289562659939 0.5604042439455784 1 TEN 3 7 50.916 0.0 0.0 3.933 0.0 0.0 0.0 947.4334776528144 947.4334776528144 46.31228130928562 0.0 0.0 0.0 0 0.6747425010840047 1.5228787452803376 0.0 0.4247425010840047 TEN 3.933 - 61 + 1 2.256 60922.4 1.0 585 2905 3491 DOHH2_400M_050219_1,3492 DOHH2_400M_050219_1,3492,TETDLRNHFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3493 17.114 468.0 184600.0 25 0 17138.0 + 18992 LDGSTPAPQA 10 113 478.7378379854968 955.4611230377936 2 478.7378112673759 MULTI CID FTMS 0 0 0 3491 143725.296875 0.7726122848996876 1 -0.0155467987060546 2 Unmodified _LDGSTPAPQA_ REV__ENSG00000126838|ENST00000261336|PZP;REV__nc|ENSG00000126838|P20742-2|PZP 18.1463463914782 0.5430639438673815 1 YSSSK 5 -1 27.919 0.0 0.0 2.922 0.0 0.0 385.1966970128812 0.0 385.1966970128812 0.0 6.949540512025525 0.0 0.0 0 0.0 0.0 0.5501648626366046 0.1861818737241735 YSSSK 2.922 - 146 + 1 2.256 71531.9 1.0 586 2905 3491 DOHH2_400M_050219_1,3493 DOHH2_400M_050219_1,3493,LDGSTPAPQA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3496 17.127 343.0 255200.0 25 0 48202.0 + 7608 EIQTLLVQ 8 100 472.27573459414793 942.536916255096 2 472.2759582400322 MULTI CID FTMS 0 0 0 3495 187114.90625 0.3400643930874832 -7 0.1442623138427734 1 Unmodified _EIQTLLVQ_ REV__ENSG00000204610|ENST00000376694|TRIM15 26.88365393820708 0.4786498634179528 1 E{I|L}[{M(Oxidation (M))|F}V]TKPG 8 -1 42.093 0.0 0.0 4.466 0.0 0.0 0.0 68.05122553043202 68.05122553043202 26.38001150193125 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.4247425010840047 0.0 E{I|L}[{M(Oxidation (M))|F}V]TKPG 4.466 - 123 + 1 2.256 70463.2 1.0 587 2907 3495 DOHH2_400M_050219_1,3496 DOHH2_400M_050219_1,3496,EIQTLLVQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3501 17.144 102.0 778250.0 25 0 247510.0 28125 PPPLCRPLVSM 11 69 403.8879992177143 1208.6421682533428 3 403.8876525759697 MULTI CID FTMS 0 0 0 3500 284103.375 0.0725071420026318 29 -0.6407222747802734 1 Unmodified _PPPLCRPLVSM_ ENSG00000132518|ENST00000254854|GUCY2D 8.155526934196011 0.8366696279279818 1 PEH 3 10 19.763 0.0 0.0 1.6351 0.0 0.0 448.246166098217 394.21982752017817 842.4659936183951 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 PEH 1.6351 - 122 + 1 2.256 65589.6 1.0 588 2911 3500 DOHH2_400M_050219_1,3501 DOHH2_400M_050219_1,3501,PPPLCRPLVSM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3502 17.158 800.0 201000.0 25 0 27688.0 28145 PPPRLGGV 8 142 396.7407200650443 791.4668871968886 2 396.7398864626884 MULTI CID FTMS 0 0 0 3500 74944.6171875 0.6525163912849176 5 -0.1711406707763672 2 Unmodified _PPPRLGGV_ SVA_D_dup1331|chr19:38854971-38856692:-|1.2988722813039473|0.199855440521665|2.7|47.0|7|1|sense 5.230669730166228 0.792582437072536 1 YVG 3 7 23.861 0.0 0.0 3.0148 0.0 0.0 454.30082900215 0.0 454.30082900215 0.0 6.069758080123698 0.0 0.0 0 0.5189301784845296 0.0 0.0 0.0 YVG 3.0148 - 109 1 2.256 127169.0 0.9200000166893004 589 2911 3500 DOHH2_400M_050219_1,3502 DOHH2_400M_050219_1,3502,PPPRLGGV False False False False ERV PXD020620_cell_line DOHH2_400M_050219_1 3503 17.164 339.0 428240.0 25 0 49558.0 + 23641 LTQQITKAK 9 122 515.816566485779 1029.618580038358 2 515.8168212771416 MULTI CID FTMS 0 0 0 3500 299598.46875 0.0984550977884952 -4 0.0207729339599609 3 Unmodified _LTQQITKAK_ REV__ENSG00000107371|ENST00000327304|EXOSC3 75.76082778847304 0.0188720312721366 1 KT{I|L}QTQ{I|L}AK 9 -1 + 106.43 0.0 0.0 10.337 10.337 94.313 0.0 0.0 0.0 75.27038506582296 20.14947752628072 20.14947752628072 9.208187539523747 0 2.774227503252014 0.0 0.7134679910804405 0.8983649548915111 KT{I|L}QTQ{I|L}AK;KT{I|L}[AG]TQ{I|L}AK;KT{I|L}QT[AG]{I|L}AK;KT{I|L}[AG]T[AG]{I|L}AK;[KT]{I|L}QTQ{I|L}AK;[{I|L}T]QQ[KT]{I|L}AK;[{I|L}T]QKTQ{I|L}AK;[KT]{I|L}[AG]TQ{I|L}AK;[{I|L}T]KQTQ{I|L}AK;[{I|L}T]QTKQ{I|L}AK 10.337;9.4429;9.4429;8.5528;6.8364;6.1918;6.0704;5.9421;5.9268;5.7075 -;-;-;-;-;-;-;-;-;- 3067 + 1 2.256 112453.0 1.0 590 2911 3500 DOHH2_400M_050219_1,3503 DOHH2_400M_050219_1,3503,LTQQITKAK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3504 17.178 800.0 116990.0 25 0 6940.3 5628 DPDDYDDGFS 10 131 573.1969763718788 1144.3793998105575 2 573.1974975466728 MULTI CID FTMS 0 0 0 3500 92102.9453125 0.1486360711344485 -5 0.0248394012451171 4 Unmodified _DPDDYDDGFS_ chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1;ENSG00000073584|ENST00000348513|SMARCE1;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;nc|ENSG00000073584|Q969G3-2|SMARCE1;nc|ENSG00000073584|Q969G3-3|SMARCE1;nc|ENSG00000073584|Q969G3-4|SMARCE1;nc|ENSG00000073584|Q969G3-5|SMARCE1;nc|ENSG00000073584|Q969G3-6|SMARCE1 14.838274106304384 0.5985701837916485 1 [DP]NPAN 6 8 30.5 0.0 0.0 2.6652 0.0 0.0 0.0 533.1027078020396 533.1027078020396 6.687273897367216 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.4247425010840047 0.2887254899964357 [DP]NPAN 2.6652 - 449 1 2.256 75228.6 0.4699999988079071 591 2911 3500 DOHH2_400M_050219_1,3504 DOHH2_400M_050219_1,3504,DPDDYDDGFS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3506 17.183 93.0 430070.0 25 0 17084.0 -1 RFWMQAEK 8 78 556.2725644344841 1110.5305759357682 2 556.2727538943291 MULTI CID FTMS 0 0 0 3505 369745.84375 0.2832975583939051 9 -0.3076763153076172 1 Oxidation (M) _RFWM(Oxidation (M))QAEK_ ENSG00000101605|ENST00000356443|MYOM1;nc|ENSG00000101605|P52179-2|MYOM1 24.020572477871973 0.5389365498350341 1 [DV]HQVDAAEK 10 -1 + 93.054 0.0 0.0 8.3793 8.3793 92.435 0.0 0.0 0.0 18.324837663178258 67.56463251235677 18.324837663178258 9.164539485499262 0 2.3494850021680094 1.2218487496163564 0.2215141619232908 0.0 [DV]HQVDAAEK;[DV]H[AG]VDAAEK;[DV]HQVD[VS]{[NV]|[RG]};[DV]H[AG]VD[VS]{[NV]|[RG]};[DV]H[RD]AW{[NV]|[RG]};[KG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VDW{[NV]|[RG]};[VS][WM]K[{M(Oxidation (M))|F}T]{[NV]|[RG]} 8.3793;7.554;4.7118;3.8866;3.0646;2.6388;0.49814 -;-;-;-;-;-;- 400 1 2.256 35845.2 1.0 592 2912 3505 DOHH2_400M_050219_1,3506 DOHH2_400M_050219_1,3506,RFWMQAEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3507 17.191 449.0 183940.0 25 0 34247.0 + 28052 PPDAPPSKNK 10 91 525.7839098043993 1049.5532666755985 2 525.7844116091728 MULTI CID FTMS 0 0 0 3505 218350.03125 0.5511608832329803 9 -0.3076763153076172 2 Unmodified _PPDAPPSKNK_ REV__ENSG00000156970|ENST00000287598|BUB1B;REV__nc|ENSG00000156970|O60566-2|BUB1B;REV__nc|ENSG00000156970|O60566-3|BUB1B 17.11289562659939 0.5604042439455784 1 TP{I|L}[WP]K 6 -1 37.21 0.0 0.0 3.5453 0.0 0.0 309.1346216019186 0.0 309.1346216019186 0.0 21.725534297491294 0.0 0.0 0 2.079689690656103 0.0 0.5 0.3252574989159953 TP{I|L}[WP]K 3.5453 - 92 + 1 2.256 66245.7 1.0 593 2912 3505 DOHH2_400M_050219_1,3507 DOHH2_400M_050219_1,3507,PPDAPPSKNK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3508 17.196 290.0 267180.0 25 0 14807.0 + 24578 MLHEKTSKL 9 111 362.8707126541809 1085.5903085627428 3 362.8711120486259 MULTI CID FTMS 0 0 0 3505 142376.015625 0.3443516379562891 -3 0.0467605590820312 3 Unmodified _MLHEKTSKL_ ENSG00000104164|ENST00000220531|BLOC1S6;ENST00000564310.1_2_15:45895313-45908032:+|nuORF;ENST00000566184.1_1_15:45879720-45897718:+|nuORF 27.088373467376528 0.1865245257266215 1 M{I|L}HEKTSK{I|L} 9 0 + 67.503 0.0 0.0 6.2181 6.2181 84.961 0.0 0.0 0.0 47.6702089124002 6.519343843670626 6.519343843670626 5.9691001300805695 0 0.0 2.0 0.805462187404089 0.0 + + M{I|L}HEKTSK{I|L};M{I|L}H{I|L}[SG]TSK{I|L};M{I|L}HEKT[K{I|L}]S;M{I|L}H{I|L}[SG]T[K{I|L}]S;M{I|L}H{I|L}{M(Oxidation (M))|F}AA[RK];M{I|L}H{[MS]|[{M(Oxidation (M))|F}A]}{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L};M{I|L}H{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}A][RK];M{I|L}H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VV{[NV]|[RG]};[YV]{I|L}HE{[QG]|[NA]}K{I|L};[KS][KT]{M(Oxidation (M))|F}{I|L}H[EP] 6.2181;5.6683;4.9678;4.4179;3.508;3.4873;2.7266;2.4003;1.416;0.96259 +;-;-;-;-;-;-;-;-;- + 227 + 1 2.256 69572.2 1.0 594 2912 3505 DOHH2_400M_050219_1,3508 DOHH2_400M_050219_1,3508,MLHEKTSKL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3509 17.21 800.0 269730.0 25 0 85134.0 23143 LSPVAIEQTSL 11 116 579.3227739396821 1156.630994946164 2 579.3226196169853 MULTI CID FTMS 0 0 0 3505 142833.078125 0.0809532463703101 -4 0.0506553649902343 4 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 24.881564428377168 0.5079759154518888 1 T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QTS{I|L} 8 5 30.403 0.0 0.0 2.6286 0.0 0.0 235.1581688737016 0.0 235.1581688737016 0.0 9.288953016022583 0.0 0.0 0 1.3494850021680094 0.0 0.3807196863200844 0.5941876774005248 T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QTS{I|L} 2.6286 - 230 + 1 2.256 164624.7 0.5899999737739563 595 2912 3505 DOHH2_400M_050219_1,3509 DOHH2_400M_050219_1,3509,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3511 17.217 152.0 413320.0 25 0 61987.0 + -1 LTGWPLTMK 9 77 531.7841938794123 1061.5538348256246 2 531.7840453982353 MULTI CID FTMS 0 0 0 3510 412601.84375 0.9714705382671168 5 -0.1663227081298828 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 34.40172386719151 0.1061884637610825 1 [KT]T[HS]{I|L}T{M(Oxidation (M))|F}K 9 -1 + 47.074 0.0 0.0 4.4344 4.4344 86.221 0.0 0.0 0.0 0.6593871989765887 34.85531242661757 0.6593871989765887 22.998037644757044 0 1.3494850021680094 0.0 0.4247425010840047 0.0 [KT]T[HS]{I|L}T{M(Oxidation (M))|F}K;[KT]T[{I|L}P]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K;[KT]{[{M(Oxidation (M))|F}H]|[RQ]}[PG]TT{[CA]|SS};[PS]{[TV]|[{I|L}S]}[RV]E{M(Oxidation (M))|F}K;[KT]T[HS]{I|L}GV[YG];[KT]T[{I|L}P]{NN|[MP]|[D{I|L}]|[EV]}T{[CA]|SS} 4.4344;2.268;2.0921;2.0326;1.8463;1.3056 -;-;-;-;-;- 172 1 2.256 53318.2 1.0 596 2913 3510 DOHH2_400M_050219_1,3511 DOHH2_400M_050219_1,3511,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3512 17.222 269.0 266110.0 25 0 63697.0 + 8994 FAVRAPHW 8 93 492.2651138828727 0 492.2650634646416 PEAK CID FTMS 0 0 0 3510 118606.6640625 0.7506252056825338 19 -0.5123100280761719 2 Unmodified _FAVRAPHW_ REV__ENSG00000100316|ENST00000216146|RPL3;REV__ENST00000481985.5_1_22:39710087-39711482:-|nuORF 5.760428011301431 0.5786759180849727 1 C(Carbamidomethyl (C)) 1 -1 1.5938 0.0 0.0 0.16222 0.0 0.0 694.3949605764892 125.07203088931875 819.466991465808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.16222 - 3 + 1 2.256 58289.8 1.0 597 2913 3510 DOHH2_400M_050219_1,3512 DOHH2_400M_050219_1,3512,FAVRAPHW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3513 17.226 225.0 332250.0 25 0 46126.0 + 28444 PTDMEHTGHY 10 112 396.49794370548494 1186.4720017166549 3 396.4975768923759 MULTI CID FTMS 0 0 0 3510 231365.75 0.8561160978694068 -1 0.0319786071777343 3 Unmodified _PTDMEHTGHY_ ENSG00000126860|ENST00000462804|EVI2A;nc|ENSG00000126860|P22794-2|EVI2A 36.12702656103203 0.1984647928738587 1 [TP]DYH 5 6 28.261 0.0 0.0 2.3819 0.0 0.0 0.0 570.1894449141736 570.1894449141736 8.8319430544794 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.3807196863200844 0.0 [TP]DYH 2.3819 - 128 1 2.256 66861.6 1.0 598 2913 3510 DOHH2_400M_050219_1,3513 DOHH2_400M_050219_1,3513,PTDMEHTGHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3514 17.235 514.0 239810.0 25 0 33742.0 + 45262 YSDHPSGGSY 10 136 535.2144151573585 1068.414277381517 2 535.2146484255791 MULTI CID FTMS 0 0 0 3510 165042.234375 0.3089729640615991 -3 0.074676513671875 4 Unmodified _YSDHPSGGSY_ ENSG00000147274|ENST00000320676|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;nc|ENSG00000147274|P38159-2|RBMX 85.64151623876279 0.0124443716933876 1 [HD]SYPSGGSY 10 4 + 65.332 0.0 0.0 6.1148 6.1148 82.112 0.0 0.0 0.0 7.13014686917704 16.53212513775344 7.13014686917704 3.3496219575940955 0 1.2302046884880935 0.9208187539523752 1.6610892374447828 0.0 [HD]SYPSGGSY;[HD]SYPSNSY;YS[QA]YMGSY;[HS]DYPSGGSY;[HS]SYYYSY;[HS]DYPSNSY;{[{M(Oxidation (M))|F}C]|[YS]}[HS]YYSY;{[{M(Oxidation (M))|F}C]|[YS]}[HD]PSGGSY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HC]YYSY;{[{M(Oxidation (M))|F}C]|[YS]}[HD]PSNSY 6.1148;5.8013;5.4475;5.2176;4.929;4.9041;4.867;4.6292;4.4031;4.3157 -;-;-;-;-;-;-;+;-;- + 2162 1 2.256 95511.2 1.0 599 2913 3510 DOHH2_400M_050219_1,3514 DOHH2_400M_050219_1,3514,YSDHPSGGSY True True YSDHPSGGSY 17.234886 535.214648425579 5632863.0 3510.0 ENSG00000147274|ENST00000320676|RBMX;;nc|ENSG00000147274|P38159-2|RBMX;;ENSG00000213516|ENST00000652648|RBMXL1 10.681809425354004 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3516 17.251 800.0 143270.0 25 0 5419.9 + 7111 EEMKKGSQF 9 148 542.2598114465428 1082.5050699598855 2 542.2592040896416 MULTI CID FTMS 0 0 0 3515 93367.890625 0.2562886644276586 8 -0.2653656005859375 1 Unmodified _EEMKKGSQF_ ENSG00000136628|ENST00000366923|EPRS1 36.506200033944 0.094635877243972 1 [VS]QH[DV]AAQE 10 9 + 26.851 0.0 0.0 2.4804 2.4804 68.634 0.0 0.0 0.0 1.673582218428681 -0.29931155766754 -0.29931155766754 1.7609125905568137 0 0.0 1.6989700043360187 0.75 0.0 [VS]QH[DV]AAQE;[VS]QH{[RE]|[WV]}AQE;[VS]AGH[DV]AAQE;[VS]AGH{[RE]|[WV]}AQE;{M(Oxidation (M))|F}QAA[DV]{[SA]|[TG]}Q{M(Oxidation (M))|F};WQ{[QV]|[N{I|L}]|[RA]|[KV]}T{M(Oxidation (M))|F}{M(Oxidation (M))|F}K;WQH[KA]{NN|[MP]|[D{I|L}]|[EV]}W;WQ{[QV]|[N{I|L}]|[RA]|[KV]}{[YC]|[HE]}AW;WQ{[QV]|[N{I|L}]|[RA]|[KV]}[WP][HC];[VS]QH[DV]AA[AG]E 2.4804;2.3178;2.3072;2.1405;2.0226;2.0103;1.9746;1.6729;1.6493;1.6338 -;-;-;-;-;-;-;-;-;- 937 1 2.256 89106.5 0.6299999952316284 600 2914 3515 DOHH2_400M_050219_1,3516 DOHH2_400M_050219_1,3516,EEMKKGSQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3517 17.253 79.0 890340.0 25 0 54697.0 -1 LQRNRTQSL 9 91 386.55118203748657 1156.6317167126597 3 386.5508911013603 MULTI CID FTMS 0 0 0 3515 586303.9375 0.3976932774737319 -2 0.05712890625 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LQRNRTQSL_ ENST00000296953.6_1_5:172483435-172507612:+|nuORF 30.63653989081413 0.1413794767160703 1 QTS{I|L} 4 -1 40.138 0.0 0.0 3.4703 0.0 0.0 709.3969303570032 0.0 709.3969303570032 0.0 30.648350154927822 0.0 0.0 0 0.9247425010840048 0.0 1.0 0.0 QTS{I|L} 3.4703 - 37 1 2.256 60322.5 1.0 601 2914 3515 DOHH2_400M_050219_1,3517 DOHH2_400M_050219_1,3517,LQRNRTQSL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3518 17.257 190.0 379430.0 25 0 31110.0 + -1 DLDKSTGRY 9 100 352.1761852521571 351.1689087855571 1 352.1763183474541 MULTI CID FTMS 0 0 0 3515 208368.421875 0.6969510044072985 -2 0.05712890625 3 nc|ENSG00000100592|Q9Y4D1-3|DAAM1;nc|ENSG00000100592|Q9Y4D1|DAAM1;ENSG00000100592|ENST00000360909|DAAM1 1 Y 1 -1 13.099 0.0 0.0 3.7301 0.0 0.0 170.09487116524303 0.0 170.09487116524303 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.7301 - 21 + 1 2.256 66849.7 1.0 602 2914 3515 DOHH2_400M_050219_1,3518 DOHH2_400M_050219_1,3518, False False DLDKSTGRY 17.256698 352.176318347454 1428951.625 3515.0 nc|ENSG00000100592|Q9Y4D1-3|DAAM1;;nc|ENSG00000100592|Q9Y4D1|DAAM1;;ENSG00000100592|ENST00000360909|DAAM1 4.840957800547282 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3519 17.265 462.0 177990.0 25 0 15348.0 5441 DLPHPWVP 8 88 480.7507164366413 959.4868799400826 2 480.7501708865166 MULTI CID FTMS 0 0 0 3515 139853.265625 0.5519688313616847 -2 0.05712890625 4 Unmodified _DLPHPWVP_ ENST00000472654.1_1_X:48933860-48934482:-|nuORF 14.581692164780916 0.6954967302934248 1 D{I|L}{[NV]|[RG]}KGSMP 9 6 + 57.17 0.0 0.0 5.9584 5.9584 77.145 0.0 0.0 0.0 21.68867645411513 0.2227639471115239 0.2227639471115239 0.2227639471115239 0 1.6039171939081172 2.0 0.805462187404089 0.0 D{I|L}{[NV]|[RG]}KGSMP;D{I|L}{[NV]|[RG]}KGSPM;D{I|L}{[NV]|[RG]}KGEW;D{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[{I|L}P]W;D{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[W{I|L}]P;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}KGS{I|L}D;D{I|L}{[NV]|[RG]}KWW;{NN|[MP]|[D{I|L}]|[EV]}[VS][{I|L}A]D{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}[VS][W{I|L}]{I|L}D;{[TV]|[{I|L}S]}{[RE]|[WV]}PM{I|L}D 5.9584;5.9352;5.8595;5.5439;4.8386;4.692;4.2231;4.0965;4.0489;3.0865 -;-;-;-;-;-;-;-;-;- 370 + 1 2.256 71056.5 1.0 603 2914 3515 DOHH2_400M_050219_1,3519 DOHH2_400M_050219_1,3519,DLPHPWVP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3521 17.283 800.0 150920.0 25 0 11059.0 + 24579 MLHEKTSKL 9 131 543.8023878563743 1085.5902227795484 2 543.8027831912041 MULTI CID FTMS 0 0 0 3520 105303.3125 1.0 0 0.0 1 Unmodified _MLHEKTSKL_ ENSG00000104164|ENST00000220531|BLOC1S6;ENST00000564310.1_2_15:45895313-45908032:+|nuORF;ENST00000566184.1_1_15:45879720-45897718:+|nuORF 59.17704102725264 0.0265377155841051 1 {I|L}MHEKTSK{I|L} 9 2 + 100.1 0.0 0.0 9.2206 9.2206 88.387 0.0 0.0 0.0 8.010299956639813 3.993298381186378 3.993298381186378 3.993298381186378 0 2.9361818737241734 2.0 1.274227503252014 0.3054621874040891 {I|L}MHEKTSK{I|L};{I|L}MHEKTS{I|L}K;M{I|L}HEKTSK{I|L};M{I|L}HEKTS{I|L}K;{I|L}MHEKTKS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HEKTSK{I|L};M{I|L}HEKTKS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H[SG]{I|L}TSK{I|L};{I|L}M{I|L}{[DA]|[EG]}[WP]K{I|L};{I|L}M{I|L}W[VP]QS{I|L} 9.2206;8.8527;8.4827;8.1148;8.038;8.0303;7.3001;6.4648;5.4712;5.4613 -;-;+;-;-;+;-;-;-;- + 1349 + 1 2.256 95561.9 0.4900000095367431 604 2915 3520 DOHH2_400M_050219_1,3521 DOHH2_400M_050219_1,3521,MLHEKTSKL True True MLHEKTSKL 17.282584 543.802783191204 2222336.03125 3520.0 ENSG00000104164|ENST00000220531|BLOC1S6;;ENST00000566184.1_1_15:45879720-45897718:+|nuORF;;ENST00000564310.1_2_15:45895313-45908032:+|nuORF 5.720950444539388 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3522 17.296 800.0 127200.0 25 0 6961.4 + 26502 NVDSNEQGSY 10 144 556.7284645707346 1111.442376208269 2 556.7283813357353 MULTI CID FTMS 0 0 0 3520 127377.546875 0.6613048666424929 1 -0.0453948974609375 2 Unmodified _NVDSNEQGSY_ ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 34.40172386719151 0.2166836008404837 1 GWH[C(Carbamidomethyl (C))K]SY 7 8 33.613 0.0 0.0 3.0242 0.0 0.0 175.016058924869 0.0 175.016058924869 0.0 -0.3212931271067489 -0.3212931271067489 0.0 0 0.25 0.0 0.2396518287104437 0.0 GWH[C(Carbamidomethyl (C))K]SY 3.0242 - 2887 + 1 2.256 78709.4 0.5600000023841858 605 2915 3520 DOHH2_400M_050219_1,3522 DOHH2_400M_050219_1,3522,NVDSNEQGSY False True NVDSNEQGSY 17.296419 556.728381335735 899046.75 3520.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 4.063218712806702 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3523 17.31 800.0 109010.0 25 0 6172.2 + 28445 PTDMEHTGHY 10 121 594.2428613183232 1186.4711697034463 2 594.2427245974541 MULTI CID FTMS 0 0 0 3520 101982.1484375 1.0 0 0.0 3 Unmodified _PTDMEHTGHY_ ENSG00000126860|ENST00000462804|EVI2A;nc|ENSG00000126860|P22794-2|EVI2A 96.11092074494114 0.0088956849251946 1 PTDMEHTGHY 10 0 + 93.432 0.0 0.0 7.8748 7.8748 81.601 0.0 0.0 0.0 32.01667520279372 0.1274290102549002 0.1274290102549002 0.1274290102549002 0 1.7104093769761874 1.6989700043360187 0.9476212463643424 0.0 + + PTDMEHTGHY;PTDMEHTGNW;PTDMEHTGGGW;PTDMEHTGYH;PTDY{[MG]|[TS]}{M(Oxidation (M))|F}GHY;PTDY{[MG]|[TS]}{M(Oxidation (M))|F}GNW;PTDY{[MG]|[TS]}{M(Oxidation (M))|F}GGGW;PTDM{[SA]|[TG]}{[YC]|[HE]}HY;PTDM{[SA]|[TG]}{[YC]|[HE]}NW;PTDY{[MG]|[TS]}{M(Oxidation (M))|F}GYH 7.8748;7.8641;7.0917;7.0336;5.5173;5.5066;4.7342;4.7029;4.6921;4.6761 +;-;-;-;-;-;-;-;-;- + 473 + 1 2.256 69791.9 0.4900000095367431 606 2915 3520 DOHH2_400M_050219_1,3523 DOHH2_400M_050219_1,3523,PTDMEHTGHY True True PTDMEHTGHY 17.31025 594.242724597454 1560623.375 3520.0 ENSG00000126860|ENST00000462804|EVI2A;;nc|ENSG00000126860|P22794-2|EVI2A 7.823352018992106 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3525 17.315 59.0 681900.0 25 0 81789.0 + 371 AEDKENYKKF 10 70 424.5472325847877 1270.619868354563 3 424.5470458865166 MULTI CID FTMS 0 0 0 3524 787012.3125 0.3753039386804923 3 -0.0913105010986328 1 Unmodified _AEDKENYKKF_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 45.739877483867886 0.1051543674217965 1 AEDKENYKK{M(Oxidation (M))|F} 10 0 + 88.595 0.0 0.0 6.9726 6.9726 83.314 0.0 0.0 0.0 32.01667520279372 2.632414347745822 2.632414347745822 2.632414347745822 0 0.3252574989159953 1.6989700043360187 0.5 0.4247425010840047 + + AEDKENYKK{M(Oxidation (M))|F};AEDKENYK{M(Oxidation (M))|F}K;AEDKEGGYKK{M(Oxidation (M))|F};AEDKEGGYK{M(Oxidation (M))|F}K 6.9726;6.7654;6.2513;6.0441 +;-;-;- + 430 + 1 2.256 40091.4 1.0 607 2916 3524 DOHH2_400M_050219_1,3525 DOHH2_400M_050219_1,3525,AEDKENYKKF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3526 17.318 166.0 332710.0 25 0 60577.0 + 2868 AVDPQHNGY 9 84 500.7278291418153 999.4411053504308 2 500.7278930544853 MULTI CID FTMS 0 0 0 3524 313130.25 0.4695920354027092 2 -0.0657863616943359 2 Unmodified _AVDPQHNGY_ ENSG00000170145|ENST00000304987|SIK2 42.09456458481378 0.0639583784996157 1 {[VA]|[{I|L}G]}D[HT]NH 7 4 48.032 0.0 0.0 4.8059 0.0 0.0 0.0 222.0882509820922 222.0882509820922 36.0425788214684 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.3807196863200844 {[VA]|[{I|L}G]}D[HT]NH 4.8059 - 375 + 1 2.256 48660.0 1.0 608 2916 3524 DOHH2_400M_050219_1,3526 DOHH2_400M_050219_1,3526,AVDPQHNGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3527 17.329 589.0 147400.0 25 0 10364.0 + -1 TATPTIMK 8 123 439.7361325732477 877.4577122132955 2 439.7357055544853 MULTI CID FTMS 0 0 0 3524 109268.2109375 0.1352660393524529 -10 0.1959800720214843 3 Oxidation (M) _TATPTIM(Oxidation (M))K_ ENSG00000020577|ENST00000554335|SAMD4A;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 29.081581746732265 0.4323690340403521 1 [TA]TP{I|L}T{M(Oxidation (M))|F}K 8 -1 + 54.925 0.0 0.0 6.2595 6.2595 87.416 0.0 0.0 0.0 43.66582474030782 3.7611500476243975 3.7611500476243975 9.016912659861305 0 0.8807196863200843 1.6989700043360187 0.7742275032520141 0.0669015600442578 [TA]TP{I|L}T{M(Oxidation (M))|F}K;[TA]TP{I|L}{[NV]|[RG]}Y;[TA]G[{I|L}P]{M(Oxidation (M))|F}T[TA];[TP][Q{I|L}]{M(Oxidation (M))|F}T[TA];[{I|L}T][QP]{M(Oxidation (M))|F}T[TA];{[SA]|[TG]}A[{I|L}P]{M(Oxidation (M))|F}T[TA];[{I|L}T][KT]P{M(Oxidation (M))|F}[TA];[QT][{I|L}P]{M(Oxidation (M))|F}T[TA];[{I|L}T][KT]PT{[MS]|[{M(Oxidation (M))|F}A]} 6.2595;5.2319;3.2808;0.9458;0.57301;0.41207;0.37386;0.3096;0.17318 -;-;-;-;-;-;-;-;- 179 + 1 2.256 70349.4 1.0 609 2916 3524 DOHH2_400M_050219_1,3527 DOHH2_400M_050219_1,3527,TATPTIMK False False TATPTIMK 17.328604 439.735705554485 15580849.0 3524.0 ENSG00000020577|ENST00000554335|SAMD4A;;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 0.6052995125452677 2.0 True 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3528 17.342 800.0 100010.0 25 0 19702.0 + 14717 IKHEKGPAH 9 91 508.78350576150376 1015.5524585898077 2 508.7836181521416 MULTI CID FTMS 0 0 0 3524 86736.2265625 1.0 0 0.0 4 Unmodified _IKHEKGPAH_ REV__ENSG00000131791|ENST00000254101|PRKAB2;REV__ENST00000474939.1_1_1:146638515-146644062:-|nuORF 15.847184025352805 0.4077185912009129 1 DW 2 -1 15.573 0.0 0.0 1.5335 0.0 0.0 696.4352233376576 0.0 696.4352233376576 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DW 1.5335 - 39 + 1 2.256 67467.7 0.4699999988079071 610 2916 3524 DOHH2_400M_050219_1,3528 DOHH2_400M_050219_1,3528,IKHEKGPAH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3530 17.347 89.0 500660.0 25 0 42018.0 + 29902 QSDPAPLQH 9 71 496.7437002177545 0 496.7434875369072 PEAK CID FTMS 0 0 0 3529 597587.625 0.8136284567544151 -2 0.077545166015625 1 Unmodified _QSDPAPLQH_ ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53268946-53269411:-|nuORF;ENST00000466765.1_1_3:53267112-53269174:-|nuORF;ENST00000487660.1_1_3:53268946-53276200:-|nuORF;nc|ENSG00000163931|P29401-2|TKT 48.345845343767074 0.036192834052621 1 PAD 3 7 13.188 0.0 0.0 1.3301 0.0 0.0 330.1198986762793 375.2051485651001 705.3250472413794 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PAD 1.3301 - 52 + 1 2.256 37792.9 1.0 611 2917 3529 DOHH2_400M_050219_1,3530 DOHH2_400M_050219_1,3530,QSDPAPLQH True True QSDPAPLQH 17.347206 496.743487536907 5759528.5 3529.0 nc|ENSG00000163931|P29401-2|TKT;;ENSG00000163931|ENST00000462138|TKT;;ENST00000487660.1_1_3:53268946-53276200:-|nuORF;;ENST00000460343.5_1_3:53268946-53269411:-|nuORF;;ENST00000466765.1_1_3:53267112-53269174:-|nuORF 7.851706504821777 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3531 17.355 442.0 110120.0 25 0 13507.0 + 373 AEDKENYKKF 10 70 636.3170612985629 1270.6195696639256 2 636.3171264529228 MULTI CID FTMS 0 0 0 3529 94560.28125 0.1866594230089847 4 -0.1430110931396484 2 Unmodified _AEDKENYKKF_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 70.92866715596459 0.0189067049654103 1 {[CP]|[EA]}DKENYKK{M(Oxidation (M))|F} 10 0 {[CP]|[EA]} + + 59.313 2.8432 1.421 4.668 4.668 55.456 0.0 0.0 0.0 0.0 38.59927197006526 0.0 0.0 0 2.6307196863200843 0.0 0.0 0.2887254899964357 + + {[CP]|[EA]}DKENYKK{M(Oxidation (M))|F} 4.668 + + 150 + 1 2.256 42236.1 1.0 612 2917 3529 DOHH2_400M_050219_1,3531 DOHH2_400M_050219_1,3531,AEDKENYKKF True True AEDKENYKKF 17.355083 636.317126452923 27333295.0 3529.0 ENSG00000096384|ENST00000371646|HSP90AB1;;nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1 8.316455205281576 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3532 17.357 69.0 1514600.0 25 0 259020.0 -1 TATRPITKM 9 75 517.7867407916422 1033.5589286500842 2 517.7868530154228 MULTI CID FTMS 0 0 0 3529 880358.25 0.8921311471671985 -1 0.0321502685546875 3 Oxidation (M) _TATRPITKM(Oxidation (M))_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 28.49450938151212 0.1686335738423394 1 KTT{I|L}P[WP]K 8 -1 68.211 0.0 0.0 6.5996 0.0 0.0 63.998799577697646 0.0 63.998799577697646 0.0 32.55903476495184 0.0 0.0 0 1.7302046884880935 0.0 1.424742501084005 0.6307196863200843 KTT{I|L}P[WP]K 6.5996 - 237 + 1 2.256 84571.6 1.0 613 2917 3529 DOHH2_400M_050219_1,3532 DOHH2_400M_050219_1,3532,TATRPITKM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3533 17.362 301.0 339660.0 25 0 64456.0 + 15943 ITAKDSAKN 9 97 474.2616349443055 946.5087169554108 2 474.2617675662041 MULTI CID FTMS 0 0 0 3529 243001.21875 0.0636466155296177 -5 0.1646652221679687 4 Unmodified _ITAKDSAKN_ REV__ENSG00000108469|ENST00000317905|RECQL5;REV__nc|ENSG00000108469|O94762-2|RECQL5;REV__nc|ENSG00000108469|O94762-3|RECQL5;REV__nc|ENSG00000108469|O94762-4|RECQL5 37.97399986684836 0.0865783450051559 1 [{I|L}T]AQSVSNK 9 -1 + 83.955 0.0 0.0 8.87 8.87 93.63 0.0 0.0 0.0 62.986315823577854 11.082268588648247 11.082268588648247 9.208187539523747 0 0.8494850021680094 2.0 1.066901560044258 0.6989700043360187 [{I|L}T]AQSVSNK;[{I|L}T]A[AG]SVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSGGK;{[CT]|[{M(Oxidation (M))|F}G]}[R{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VP;{[QN]|[E{I|L}]|[KN]}S[SG]{[VA]|[{I|L}G]}A[{I|L}T];{[QN]|[E{I|L}]|[KN]}S[SG][Q{I|L}][{I|L}T] 8.87;7.8972;7.8972;6.9289;1.114;0.55767;0.37163 -;-;-;-;-;-;- 363 + 1 2.256 85070.4 1.0 614 2917 3529 DOHH2_400M_050219_1,3533 DOHH2_400M_050219_1,3533,ITAKDSAKN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3534 17.376 800.0 255240.0 25 0 15137.0 + 6479 EAHAKVRL 8 160 462.2745543327576 922.5345557323152 2 462.2745544314384 MULTI CID FTMS 0 0 0 3529 106482.5078125 0.1930366808416331 -4 0.1326866149902343 5 Unmodified _EAHAKVRL_ ENSG00000104738|ENST00000649973|MCM4 52.268347100219714 0.1285778651304833 1 EAHAKVR{I|L} 8 0 + 57.791 0.0 0.0 6.2644 6.2644 91.97 0.0 0.0 0.0 41.76070576767757 7.919562702124452 7.919562702124452 16.53212513775344 0 0.9650302283996908 1.0969100130080565 0.0 0.3807196863200844 + + EAHAKVR{I|L};EAH{I|L}[KG]R{I|L};EAHAK[R{I|L}]V;EAHA{I|L}[RK]V;EA{I|L}H[KG]R{I|L};EAH{I|L}A[RK]V;EA{I|L}HA[RK]V;{I|L}{[CP]|[EA]}H[KG]R{I|L} 6.2644;4.4724;4.4566;4.0854;3.3207;3.2419;2.0902;0.98538 +;-;-;-;-;-;-;- + 154 + 1 2.256 157607.3 0.4799999892711639 615 2917 3529 DOHH2_400M_050219_1,3534 DOHH2_400M_050219_1,3534,EAHAKVRL False True EAHAKVRL 17.376048 462.274554431438 2288111.0 3529.0 ENSG00000104738|ENST00000649973|MCM4 2.865130305290222 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3536 17.385 292.0 274990.0 25 0 83640.0 + + -1 ELPKKTEV 8 85 472.27573459414793 942.536916255096 2 472.2757140994072 MULTI CID FTMS 0 0 0 3535 212958.109375 0.3870320738686058 4 -0.1241931915283203 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SLVEKQVV_ ENSG00000131778|ENST00000369258|CHD1L;nc|ENSG00000131778|Q86WJ1-2|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L 26.88365393820708 0.4786498634179528 1 {[QN]|[E{I|L}]|[KN]}V{I|L}E{[QN]|[E{I|L}]|[KN]}V 8 -1 + 50.278 0.0 0.0 5.3343 5.3343 78.611 0.0 0.0 0.0 5.205130980917048 34.44073837982042 5.205130980917048 3.0102999566398125 0 0.8807196863200843 2.0 0.3054621874040891 0.0 {[QN]|[E{I|L}]|[KN]}V{I|L}E{[QN]|[E{I|L}]|[KN]}V;{[QN]|[E{I|L}]|[KN]}V{I|L}EV{[QN]|[E{I|L}]|[KN]};[KP]KTE{[QN]|[E{I|L}]|[KN]}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}E{[QN]|[E{I|L}]|[KN]}V;[KP]KTEV{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}EV{[QN]|[E{I|L}]|[KN]} 5.3343;5.015;2.1893;1.8834;1.8699;1.564 -;-;-;-;-;- 103 1 2.264 66725.2 1.0 616 2918 3535 DOHH2_400M_050219_1,3536 DOHH2_400M_050219_1,3536,SLVEKQVV False False ELPKKTEV 17.385273 472.275714099407 2743779.75 3535.0 ENSG00000131778|ENST00000369258|CHD1L;;nc|ENSG00000131778|Q86WJ1-2|CHD1L;;nc|ENSG00000131778|Q86WJ1-3|CHD1L;;nc|ENSG00000131778|Q86WJ1-4|CHD1L 4.926368316014608 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3537 17.388 117.0 610080.0 25 0 160190.0 + 3053 AVLGHAAEK 9 90 448.2533359151568 894.4921188971136 2 448.2534667849541 MULTI CID FTMS 0 0 0 3535 270100.1875 0.8396621574557803 -1 0.0336360931396484 2 Unmodified _AVLGHAAEK_ ENSG00000162600|ENST00000371226|OMA1;nc|ENSG00000162600|Q96E52-2|OMA1 32.30548876998284 0.1201446275138228 1 [HV][Q{I|L}]AAEK 8 3 + 33.8 0.0 0.0 3.7787 3.7787 74.016 0.0 0.0 0.0 1.113251095746719 18.39922058791412 1.113251095746719 3.447561685367741 0 1.0994850021680094 0.8860566476931632 0.0 0.0 [HV][Q{I|L}]AAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YK]AEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TA][YR]K 3.7787;3.3933;0.59689 -;-;- 95 1 2.264 59420.0 1.0 617 2918 3535 DOHH2_400M_050219_1,3537 DOHH2_400M_050219_1,3537,AVLGHAAEK True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3538 17.402 800.0 226510.0 25 0 24808.0 + 32720 SEAPSGESRKF 11 114 597.7911790763204 1193.5678052194407 2 597.7908813357353 MULTI CID FTMS 0 0 0 3535 123062.578125 0.0813104263273495 -8 0.2409992218017578 3 Unmodified _SEAPSGESRKF_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 91.08480475639789 0.0006208354794871 1 {[ES]|[DT]|[{I|L}C]}APSGESR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 11 0 + 77.91 0.0 0.0 6.5275 6.5275 86.353 0.0 0.0 0.0 52.86993477112557 3.4768294003359728 3.4768294003359728 6.575773191777941 0 1.305462187404089 0.0 1.2302046884880935 1.0114393726401687 + + {[ES]|[DT]|[{I|L}C]}APSGESR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}APSWSR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}APSG[H{I|L}]KDGP;{[ES]|[DT]|[{I|L}C]}APSWS[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}APSGWW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[WT]|[RM]}PSGES[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}AP[HK]EKDGP;{[ES]|[DT]|[{I|L}C]}APS[HK]{[VA]|[{I|L}G]}DGP;{[ES]|[DT]|[{I|L}C]}APS[KA][HV]DGP;{[ES]|[DT]|[{I|L}C]}AK[QT]{M(Oxidation (M))|F}P{[WT]|[RM]} 6.5275;5.9766;5.3855;5.2088;4.8481;4.115;4.075;3.9192;3.9192;3.0998 +;-;-;-;-;-;-;-;-;- + 1402 + 1 2.264 137849.7 0.5400000214576721 618 2918 3535 DOHH2_400M_050219_1,3538 DOHH2_400M_050219_1,3538,SEAPSGESRKF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3540 17.407 160.0 549240.0 25 0 109710.0 + 27291 PHKAVMENRK 10 87 403.8879992177143 1208.6421682533428 3 403.8876525759697 MULTI CID FTMS 0 0 0 3539 264351.65625 0.0674662280177054 37 -0.7337284088134766 1 Unmodified _PHKAVMENRK_ REV__ENSG00000182111|ENST00000420713|ZNF716;REV__ENSG00000185177|ENST00000319636|ZNF479;REV__ENSG00000241149|ENST00000330020|ZNF722 10.073929032068715 0.6785112666868882 1 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 7 -1 38.957 0.0 0.0 3.2232 0.0 0.0 0.0 266.16303430728755 266.16303430728755 23.18713533038057 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 3.2232 - 187 + 1 2.264 74369.9 1.0 619 2919 3539 DOHH2_400M_050219_1,3540 DOHH2_400M_050219_1,3540,PHKAVMENRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3541 17.421 800.0 81227.0 25 0 6218.9 + 18059 KTDLHNEGY 9 121 538.7540152266704 1075.4934775201407 2 538.7542602419853 MULTI CID FTMS 0 0 0 3539 55553.39453125 0.4668944375760872 1 -0.0394515991210937 2 Unmodified _KTDLHNEGY_ ENSG00000131378|ENST00000334133|RFTN1 21.59015148037692 0.2564810811560323 1 GKY 3 8 28.5 0.0 0.0 2.6499 0.0 0.0 709.3022328107437 0.0 709.3022328107437 0.0 13.015384402724592 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 GKY 2.6499 - 322 1 2.264 55848.0 0.5400000214576721 620 2919 3539 DOHH2_400M_050219_1,3541 DOHH2_400M_050219_1,3541,KTDLHNEGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3542 17.423 69.0 1215200.0 25 0 99975.0 + 32722 SEAPSGESRKF 11 99 398.8634193893099 1193.5684287681297 3 398.8631469607353 MULTI CID FTMS 0 0 0 3539 627404.875 0.1824552162658404 -6 0.1918468475341797 3 Unmodified _SEAPSGESRKF_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 40.72490554402381 0.2012291192650359 1 {[ES]|[DT]|[{I|L}C]}APSGE 7 4 49.469 0.0 0.0 4.1446 0.0 0.0 0.0 533.2851728162566 533.2851728162566 33.73857188954726 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 + {[ES]|[DT]|[{I|L}C]}APSGE 4.1446 + + 330 + 1 2.264 75600.2 1.0 621 2919 3539 DOHH2_400M_050219_1,3542 DOHH2_400M_050219_1,3542,SEAPSGESRKF False True SEAPSGESRKF 17.422747 398.863146960735 57617208.0 3539.0 nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 7.851113478342692 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3543 17.427 237.0 149280.0 25 0 18285.0 + 42729 VVDEHTGQY 9 79 524.2406214217901 1046.4666899103802 2 524.2408935427666 MULTI CID FTMS 0 0 0 3539 147597.859375 0.9172346465788228 -1 0.0255241394042968 4 Unmodified _VVDEHTGQY_ ENSG00000135541|ENST00000265602|AHI1;nc|ENSG00000135541|Q8N157-2|AHI1;nc|ENSG00000135541|Q8N157-3|AHI1 29.081581746732265 0.1611639662936252 1 VVDE 4 5 58.186 0.0 0.0 5.5603 0.0 0.0 0.0 601.2352999322874 601.2352999322874 43.58214355810561 0.0 0.0 0.0 0 0.5451140161145328 2.0 0.3807196863200844 0.0 + VVDE 5.5603 + + 120 + 1 2.264 39573.0 1.0 622 2919 3539 DOHH2_400M_050219_1,3543 DOHH2_400M_050219_1,3543,VVDEHTGQY False True VVDEHTGQY 17.427197 524.240893542767 706475.1875 3539.0 ENSG00000135541|ENST00000265602|AHI1;;nc|ENSG00000135541|Q8N157-2|AHI1;;nc|ENSG00000135541|Q8N157-3|AHI1 5.078933397928874 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3544 17.441 800.0 132370.0 25 0 11121.0 + 11089 GEEENQKRYY 10 125 658.2998716358046 1314.5851903384091 2 658.8012573122978 MULTI CID FTMS 0 0 0 3539 113309.171875 1.0 0 0.0 5 Unmodified _GEEENQKRYY_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2 53.7980654928069 0.0578593193895906 1 {[DA]|[EG]}EENQKRYY 10 0 + 83.727 0.0 0.0 6.3691 6.3691 83.841 0.0 0.0 0.0 28.98570980063916 0.7846345946782662 0.7846345946782662 4.102196946754049 0 2.292674056792244 1.6989700043360187 0.4247425010840047 0.6989700043360187 + + {[DA]|[EG]}EENQKRYY;{[DA]|[EG]}EQNV{M(Oxidation (M))|F}{I|L}GV[HS];{[DA]|[EG]}EEN[AG]KRYY;{[DA]|[EG]}EEGGQKRYY;{[DA]|[EG]}EQNV{M(Oxidation (M))|F}{I|L}{[HG]|PP}W;{[DA]|[EG]}ASRKQNE[C(Carbamidomethyl (C))H];{[DA]|[EG]}EENQKRN[DP];{[DA]|[EG]}E[AG]NV{M(Oxidation (M))|F}{I|L}GV[HS];{[DA]|[EG]}GTRKQNE[C(Carbamidomethyl (C))H];WEENQK[VG]YY 6.3691;6.057;5.6719;5.6719;5.5205;5.4041;5.3831;5.3649;5.24;5.0767 +;-;-;-;-;-;-;-;-;- + 6248 + 1 2.264 82388.4 0.5 623 2919 3539 DOHH2_400M_050219_1,3544 DOHH2_400M_050219_1,3544,GEEENQKRYY True True GEEENQKRYY 17.441033 658.3003 675860.0625 3539.0 ENST00000521903.5_1_8:124361561-124413087:-|nuORF;;nc|ENSG00000156802|Q6PL18-2|ATAD2;;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;;ENSG00000156802|ENST00000287394|ATAD2;;ENST00000517666.5_1_8:124333376-124408650:-|nuORF 6.633438587188721 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3546 17.446 131.0 411690.0 25 0 44084.0 18167 KTTANLAALK 10 75 515.816566485779 1029.618580038358 2 515.8165771365166 MULTI CID FTMS 0 0 0 3545 459527.6875 0.1510115976162965 5 -0.110177993774414 1 Unmodified _KTTANLAALK_ ENSG00000047188|ENST00000161863|YTHDC2 33.4449034751529 0.2267874087365337 1 KT{I|L}Q[QT]{I|L}AK 9 6 + 77.462 0.0 0.0 7.5234 7.5234 91.908 0.0 0.0 0.0 71.86333629913753 16.97982344525242 16.97982344525242 9.208187539523747 0 2.048455006504028 0.0 0.4247425010840047 0.2887254899964357 KT{I|L}Q[QT]{I|L}AK;KT{I|L}[AG][QT]{I|L}AK 7.5234;6.6291 -;- 129 + 1 2.264 47032.9 1.0 624 2920 3545 DOHH2_400M_050219_1,3546 DOHH2_400M_050219_1,3546,KTTANLAALK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3547 17.449 138.0 346850.0 25 0 17200.0 5629 DPDDYDDGFS 10 92 573.1969763718788 1144.3793998105575 2 573.1976196169853 MULTI CID FTMS 0 0 0 3545 454068.03125 0.7327766551195652 4 -0.0734138488769531 2 Unmodified _DPDDYDDGFS_ chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1;ENSG00000073584|ENST00000348513|SMARCE1;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;nc|ENSG00000073584|Q969G3-2|SMARCE1;nc|ENSG00000073584|Q969G3-3|SMARCE1;nc|ENSG00000073584|Q969G3-4|SMARCE1;nc|ENSG00000073584|Q969G3-5|SMARCE1;nc|ENSG00000073584|Q969G3-6|SMARCE1 14.838274106304384 0.5985701837916485 1 [DP]NPAN 6 8 34.319 0.0 0.0 2.9989 0.0 0.0 0.0 533.1021859413376 533.1021859413376 7.879099962974152 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.4247425010840047 0.2614393726401688 [DP]NPAN 2.9989 - 217 1 2.264 43091.0 1.0 625 2920 3545 DOHH2_400M_050219_1,3547 DOHH2_400M_050219_1,3547,DPDDYDDGFS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3548 17.458 493.0 200990.0 25 0 9596.4 + 7182 EEQAVRPKY 9 116 560.2931531520668 1118.5717533709335 2 560.2931396365166 MULTI CID FTMS 0 0 0 3545 119487.171875 0.13062120055274 -9 0.3019027709960937 3 Unmodified _EEQAVRPKY_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 110.6747026088012 0.0053351249510064 1 EEQAVRPKY 9 0 + 80.385 0.0 0.0 7.1864 7.1864 91.258 0.0 0.0 0.0 14.618806617312645 12.92391689498254 12.92391689498254 9.208187539523747 0 1.805462187404089 1.6989700043360187 0.0 0.6747425010840047 + + EEQAVRPKY;EE[AG]AVRPKY;EEQAVRPYK;EE[AG]AVRPYK;[AG]EEAVRPKY;EEQ[RV]APKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EAVRPKY;EE[AG][RV]APKY;EEQ[RV]APYK;[QA]EEVRPKY 7.1864;6.3632;6.031;5.2078;5.0482;4.6149;4.088;3.7917;3.4595;3.03 +;-;-;-;-;-;-;-;-;- + 365 + 1 2.264 77693.9 1.0 626 2920 3545 DOHH2_400M_050219_1,3548 DOHH2_400M_050219_1,3548,EEQAVRPKY True True EEQAVRPKY 17.45777 560.293139636517 10443373.0 3545.0 ENSG00000134057|ENST00000256442|CCNB1;;nc|ENSG00000134057|P14635-2|CCNB1 8.484681765238443 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3549 17.472 800.0 114740.0 25 0 7059.3 + 11062 GEAESRNSNF 10 147 555.7445083615439 1109.4744637898875 2 555.7443115115166 MULTI CID FTMS 0 0 0 3545 99752.1875 1.0 0 0.0 4 Unmodified _GEAESRNSNF_ ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1 53.31671820480216 0.0606844387689228 1 {[DA]|[EG]}AE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QW{M(Oxidation (M))|F} 9 5 + 53.661 0.0 0.0 4.8366 4.8366 79.723 0.0 0.0 0.0 5.966649594412559 5.848396689760094 5.848396689760094 5.752574989159953 0 1.6549471895720984 1.5228787452803376 0.0 0.75 {[DA]|[EG]}AE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QW{M(Oxidation (M))|F};{[DA]|[EG]}AE[WP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F};{[DA]|[EG]}AE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}W;{[DA]|[EG]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}AEW{M(Oxidation (M))|F};{[DA]|[EG]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}AEEG{M(Oxidation (M))|F};{[DA]|[EG]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}A[NS]N{M(Oxidation (M))|F};{[DA]|[EG]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}A[NS]GG{M(Oxidation (M))|F};{[DA]|[EG]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAW{M(Oxidation (M))|F};{[DA]|[EG]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAEG{M(Oxidation (M))|F};{[DA]|[EG]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}[NS]AN{M(Oxidation (M))|F} 4.8366;4.3181;4.3095;3.9462;3.8336;3.4312;3.3226;3.3162;3.2036;3.1599 -;-;-;-;-;-;-;-;-;- 1379 + 1 2.264 73223.4 0.5 627 2920 3545 DOHH2_400M_050219_1,3549 DOHH2_400M_050219_1,3549,GEAESRNSNF True True GEAESRNSNF 17.471601 555.744311511517 434047.84375 3545.0 ENSG00000133606|ENST00000255977|MKRN1;;nc|ENSG00000133606|Q9UHC7-3|MKRN1;;nc|ENSG00000133606|Q9UHC7-2|MKRN1;;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;;nc|ENSG00000133606|Q9UHC7-4|MKRN1 6.944941361745198 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3550 17.485 800.0 90779.0 25 0 13594.0 + 16616 KEFYQFPRYWW 11 81 550.6034348836952 1648.7884752512855 3 550.6032592654228 MULTI CID FTMS 0 0 0 3545 83294.296875 1.0 0 0.0 5 Unmodified _KEFYQFPRYWW_ REV__ENSG00000198964|ENST00000361781|SGMS1;REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1 2.434785330301024 0.8636604596255422 1 [SG][H{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}G{I|L}GS{I|L}[RV][{M(Oxidation (M))|F}E] 15 -1 [SG][H{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}G{I|L} + + 30.52 7.3688 0.87474 1.8511 1.8511 48.777 0.0 0.0 0.0 0.0 15.035466487905538 0.0 0.0 0 0.8807196863200843 0.0 0.5994850021680094 0.2742275032520141 [SG][H{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}G{I|L}GS{I|L}[RV][{M(Oxidation (M))|F}E] 1.8511 - 193 + 1 2.264 61382.6 0.4699999988079071 628 2920 3545 DOHH2_400M_050219_1,3550 DOHH2_400M_050219_1,3550,KEFYQFPRYWW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3552 17.492 194.0 469920.0 25 0 147770.0 + 28265 PRFYVYIIS 9 81 579.3227739396821 1156.630994946164 2 579.3229858279228 MULTI CID FTMS 0 0 0 3551 557483.375 0.3159638481236926 5 -0.0697879791259765 1 Unmodified _PRFYVYIIS_ REV__ENSG00000171459|ENST00000304720|OR1L6;REV__nc|ENSG00000171459|Q8NGR2|OR1L6 10.823927491677226 0.5436922275383211 1 RP 2 -1 23.201 0.0 0.0 2.0059 0.0 0.0 0.0 900.4552706354124 900.4552706354124 8.992887666437142 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.0 RP 2.0059 - 43 + 1 2.264 73379.7 1.0 629 2921 3551 DOHH2_400M_050219_1,3552 DOHH2_400M_050219_1,3552,PRFYVYIIS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3553 17.5 480.0 155700.0 25 0 15486.0 + 45263 YSDHPSGGSY 10 110 535.2144151573585 1068.414277381517 2 535.2143432497978 MULTI CID FTMS 0 0 0 3551 95326.7890625 0.1784597783873492 5 -0.0697879791259765 2 Unmodified _YSDHPSGGSY_ ENSG00000147274|ENST00000320676|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;nc|ENSG00000147274|P38159-2|RBMX 56.17704186161178 0.0466144807663799 1 GSY 3 7 36.555 0.0 0.0 3.4214 0.0 0.0 743.2864857404312 0.0 743.2864857404312 0.0 21.95046257204389 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 + GSY 3.4214 + + 216 1 2.264 63457.1 1.0 630 2921 3551 DOHH2_400M_050219_1,3553 DOHH2_400M_050219_1,3553,YSDHPSGGSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3555 17.507 250.0 287590.0 25 0 36937.0 + -1 EKMPFVAPK 9 96 531.7848218021753 1061.5550906711503 2 531.7848388552666 MULTI CID FTMS 0 0 0 3554 194563.703125 0.4560437286537549 -28 0.665435791015625 1 Oxidation (M) _EKM(Oxidation (M))PFVAPK_ REV__ENST00000480881.1_1_9:115179142-115201087:+|nuORF 21.74664581756881 0.2544899275067181 1 KTE[{I|L}P][WP]K 8 -1 27.502 0.0 0.0 2.5907 0.0 0.0 63.9992628698114 0.0 63.9992628698114 0.0 22.01721569349729 0.0 0.0 0 0.9604093769761874 0.0 0.5 0.3054621874040891 KTE[{I|L}P][WP]K 2.5907 - 82 + 1 2.264 59457.1 1.0 631 2922 3554 DOHH2_400M_050219_1,3555 DOHH2_400M_050219_1,3555,EKMPFVAPK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3556 17.511 160.0 375910.0 25 0 55263.0 + 22729 LQIHSVTW 8 80 492.2702591526266 982.5259653720532 2 492.2708923220634 MULTI CID FTMS 0 0 0 3554 180025.03125 0.615390178435133 3 -0.0509605407714843 2 Unmodified _LQIHSVTW_ REV__ENST00000448083.6_1_11:65660070-65660316:-|nuORF 4.75600775471527 0.7954636275367004 1 W 1 -1 13.979 0.0 0.0 1.4228 0.0 0.0 778.4357992117002 0.0 778.4357992117002 0.0 13.266062568876718 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.4228 + + 18 + 1 2.264 52232.9 1.0 632 2922 3554 DOHH2_400M_050219_1,3556 DOHH2_400M_050219_1,3556,LQIHSVTW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3559 17.519 42.0 901120.0 25 0 97218.0 + 35364 STDPRPASY 9 66 497.2355154838741 992.4564780345482 2 497.2338134646416 MULTI CID FTMS 0 0 0 3558 730548.6875 0.1987624326220193 -6 0.1383895874023437 1 Unmodified _STDPRPASY_ ENSG00000103126|ENST00000262320|AXIN1;nc|ENSG00000103126|O15169-2|AXIN1 26.88365393820708 0.1891292719743517 1 {[MG]|[TS]}D 3 6 18.952 0.0 0.0 1.9096 0.0 0.0 0.0 686.3266617105826 686.3266617105826 4.348331157524971 0.0 0.0 0.0 0 0.5 0.0 1.0 0.0 + {[MG]|[TS]}D 1.9096 + + 50 1 2.263 39012.3 1.0 633 2924 3558 DOHH2_400M_050219_1,3559 DOHH2_400M_050219_1,3559,STDPRPASY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3560 17.524 212.0 332210.0 25 0 83875.0 + 34630 SPMSRTSFG 9 102 485.2265511795771 968.4385494259542 2 485.2263061404228 MULTI CID FTMS 0 0 0 3558 225236.34375 0.148848452761996 -8 0.2041759490966797 2 Unmodified _SPMSRTSFG_ REV__ENSG00000085511|ENST00000392142|MAP3K4 34.40172386719151 0.1061884637610825 1 SPA{M(Oxidation (M))|F}P[HN]S{I|L} 9 -1 + 63.225 0.0 0.0 6.5285 6.5285 93.452 0.0 0.0 0.0 50.12573127127844 7.598215621141335 7.598215621141335 22.715299873086607 0 1.8182503180159344 2.0 0.5941876774005249 0.7302046884880937 SPA{M(Oxidation (M))|F}P[HN]S{I|L};SP[WE][HN]S{I|L};S[WE]P[HN]S{I|L};[PS]A[YG]{[MG]|[TS]}{[WT]|[RM]};[PS][{M(Oxidation (M))|F}T][KC]{[WT]|[RM]};[PS][PG][NP]N{[WT]|[RM]};[PS][YQ]{[MG]|[TS]}{[WT]|[RM]};[PS][PG]H{[MG]|[TS]}{[WT]|[RM]};S[W{M(Oxidation (M))|F}]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}S{I|L};[VG][{M(Oxidation (M))|F}E][KC]{[WT]|[RM]} 6.5285;4.183;2.8672;2.6877;2.2406;2.0587;1.6579;1.6051;0.97522;0.68167 -;-;-;-;-;-;-;-;-;- 485 + 1 2.263 62048.2 1.0 634 2924 3558 DOHH2_400M_050219_1,3560 DOHH2_400M_050219_1,3560,SPMSRTSFG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3561 17.537 800.0 56766.0 25 0 3772.6 -1 0 55 714.9742644475454 2141.900963942836 3 714.9739257693291 MULTI CID FTMS 0 0 0 3558 92162.421875 1.0 0 0.0 3 1 [PS]{[YD]|[{M(Oxidation (M))|F}M]}Q[DV]GTSP 11 -1 51.136 0.0 0.0 2.3874 0.0 0.0 0.0 992.372762623362 992.372762623362 25.513485271514007 0.0 0.0 0.0 0 0.5 1.5228787452803376 1.3564921830680703 1.8169015600442573 [PS]{[YD]|[{M(Oxidation (M))|F}M]}Q[DV]GTSP 2.3874 - 477 1 2.263 42220.0 0.5 635 2924 3558 DOHH2_400M_050219_1,3561 DOHH2_400M_050219_1,3561, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3562 17.551 800.0 62104.0 25 0 6807.6 -1 0 52 1071.957592860415 2141.90063278763 2 1072.457446277142 MULTI CID FTMS 0 0 0 3558 90999.3984375 1.0 0 0.0 4 1 ASQG 4 -1 43.175 0.0 0.0 2.0157 0.0 0.0 1146.506638501485 649.2240694635374 1795.7307079650222 0.0 0.0 0.0 0.0 0 1.6989700043360187 0.0 0.4247425010840047 0.0 ASQG 2.0157 - 157 + 1 2.263 40158.8 0.4099999964237213 636 2924 3558 DOHH2_400M_050219_1,3562 DOHH2_400M_050219_1,3562, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3565 17.56 37.0 1669400.0 25 0 192490.0 + 7184 EEQAVRPKY 9 90 373.8650347398764 1118.5732748198293 3 373.8644286990166 MULTI CID FTMS 0 0 0 3564 1181197.0 0.7763142707177795 -2 0.0407733917236328 1 Unmodified _EEQAVRPKY_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 26.88365393820708 0.1891292719743517 1 AVRPKY 6 3 26.86 0.0 0.0 2.4012 0.0 0.0 386.144150225799 0.0 386.144150225799 0.0 14.51790047062772 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + AVRPKY 2.4012 + + 82 + 1 2.263 58188.7 1.0 637 2926 3564 DOHH2_400M_050219_1,3565 DOHH2_400M_050219_1,3565,EEQAVRPKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3566 17.566 338.0 206690.0 25 0 8116.9 + 14159 IDCYEIIEK 9 100 563.2800867805506 1124.5456206279011 2 563.2802612185478 MULTI CID FTMS 0 0 0 3564 181807.453125 0.5628708273308559 -3 0.0446128845214843 2 Unmodified _IDCYEIIEK_ ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-2|COL12A1 36.12702656103203 0.0967173616627612 1 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK 10 6 + 91.768 0.0 0.0 8.1604 8.1604 92.246 0.0 0.0 0.0 4.259687322722812 12.47853495338606 4.259687322722812 9.164539485499262 0 3.018930178484529 0.0 0.7742275032520141 0.8252574989159953 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HVDAAEK;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}AAVDAAEK;[HV]DAAVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}QHERAEK;{[CP]|[EA]}RHVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HERAEK;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}[Q{I|L}]DAAEK;{NN|[MP]|[D{I|L}]|[EV]}QHVWAEK;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[C(Carbamidomethyl (C))K]V{M(Oxidation (M))|F}AEK 8.1604;7.3455;7.0508;6.4292;6.0648;5.4715;5.246;5.2432;5.0628;4.8342 -;-;-;-;-;-;-;-;-;- 1048 + 1 2.263 57429.6 1.0 638 2926 3564 DOHH2_400M_050219_1,3566 DOHH2_400M_050219_1,3566,IDCYEIIEK True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3568 17.583 800.0 115450.0 25 0 4780.2 + 7822 ELKHHHVTL 9 127 557.3116002200624 1112.6086475069246 2 557.3111450076103 MULTI CID FTMS 0 0 0 3567 78155.9140625 0.6840600602391185 -1 0.0109233856201171 1 Unmodified _ELKHHHVTL_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 67.83816525789305 0.0219346420158844 1 E{I|L}KHHHVT{I|L} 9 0 + 54.963 0.0 0.0 4.94 4.94 85.727 0.0 0.0 0.0 17.96720330707273 9.973024840566469 9.973024840566469 10.745397123361968 0 1.6039171939081172 1.6989700043360187 0.6861818737241735 0.0 + + E{I|L}KHHHVT{I|L};[HV]{I|L}TGHHVT{I|L};[HV]H[HK]{I|L}ET{I|L};[{I|L}T][HV]GHHVT{I|L};[HV]H[HK]{I|L}TE{I|L};{[TV]|[{I|L}S]}[H{I|L}]GHHVT{I|L};HHV[HK]{I|L}ET{I|L};[HV]{I|L}TGMPV{M(Oxidation (M))|F}{I|L};[HV]H{M(Oxidation (M))|F}[KS]V{M(Oxidation (M))|F}{I|L};HHV[HK]{I|L}TE{I|L} 4.94;3.9742;3.7587;3.2582;3.1293;3.0231;2.947;2.6949;2.5893;2.3177 +;-;-;-;-;-;-;-;-;- + 1382 + 1 2.263 75634.4 0.4699999988079071 639 2927 3567 DOHH2_400M_050219_1,3568 DOHH2_400M_050219_1,3568,ELKHHHVTL True True ELKHHHVTL 17.582515 557.31114500761 540973.5625 3567.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 5.636465549468994 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3569 17.596 800.0 108750.0 25 0 7959.8 + + 39107 NRKDIENQYETQ 12 109 513.2461733185462 1536.7166905558383 3 513.2466918826103 MULTI CID FTMS 0 0 0 3567 83890.765625 0.9073470738697408 -2 0.014932632446289 2 Unmodified _TWQYLWHQFTQ_ ENSG00000171403|ENST00000246662|KRT9;P35527 9.243775137331635 0.8315352019864206 1 {I|L}ENQYETQ 8 -1 41.764 0.0 0.0 2.7177 0.0 0.0 513.2748890607437 0.0 513.2748890607437 0.0 21.279353551888107 0.0 0.0 0 0.8182503180159344 0.0 0.4247425010840047 0.5 {I|L}ENQYETQ 2.7177 - 490 1 2.263 74640.6 0.9800000190734864 640 2927 3567 DOHH2_400M_050219_1,3569 DOHH2_400M_050219_1,3569,TWQYLWHQFTQ False False NRKDIENQYETQ 17.59633 513.24669188261 507766.21875 3567.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 7.889311631520589 3.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3570 17.608 645.0 280860.0 25 0 78841.0 + 12357 GTDPTPQHY 9 136 508.227814447532 1014.441075961864 2 508.2277099490166 MULTI CID FTMS 0 0 0 3567 154102.75 0.4319197655384593 -4 0.0555362701416015 3 Unmodified _GTDPTPQHY_ ENSG00000010810|ENST00000354650|FYN;ENST00000521361.5_1_6:112040873-112041254:-|nuORF;nc|ENSG00000010810|P06241-2|FYN;nc|ENSG00000010810|P06241-3|FYN 81.89019881105858 0.0170587746866453 1 {[SA]|[TG]}DPTPQNW 9 2 + 75.628 0.0 0.0 7.4551 7.4551 85.719 0.0 0.0 0.0 23.65356566548286 3.521825181113627 3.521825181113627 3.521825181113627 0 0.8539171939081173 1.6989700043360187 0.4247425010840047 0.4247425010840047 {[SA]|[TG]}DPTPQNW;{[SA]|[TG]}DPTPQHY;{[SA]|[TG]}DPTP[AG]NW;{[SA]|[TG]}DPTPQGGW;{[SA]|[TG]}DPTPQYH;{[SA]|[TG]}DPTP[AG]HY;{[SA]|[TG]}DPTP[AG]GGW;{[SA]|[TG]}DPTP[AG]YH;{[SA]|[TG]}DPTP{[WN]|[YH]}Q;{[SA]|[TG]}DPT{[ET]|[MV]}{[SA]|[TG]}H 7.4551;7.1079;6.5474;6.5474;6.5389;5.7815;5.2253;5.2125;5.0583;3.9815 -;+;-;-;-;-;-;-;-;- + 617 + 1 2.263 145665.2 1.0 641 2927 3567 DOHH2_400M_050219_1,3570 DOHH2_400M_050219_1,3570,GTDPTPQHY True True GTDPTPQHY 17.607559 508.227709949017 4119031.75 3567.0 ENST00000521361.5_1_6:112040873-112041254:-|nuORF;;nc|ENSG00000010810|P06241-3|FYN;;nc|ENSG00000010810|P06241-2|FYN;;ENSG00000010810|ENST00000354650|FYN 9.058868090311686 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3572 17.612 61.0 663720.0 25 0 73953.0 36639 TATPTPPPP 9 61 439.7361325732477 877.4577122132955 2 439.7360717654228 MULTI CID FTMS 0 0 0 3571 663523.9375 0.8213940200092288 2 -0.0573768615722656 1 Unmodified _TATPTPPPP_ ENST00000420367.1_1_10:112631800-112631956:-|nuORF 26.88365393820708 0.1891292719743517 1 [TA]TP{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 8 5 + 58.849 0.0 0.0 6.7068 6.7068 95.273 0.0 0.0 0.0 44.24533159112684 3.979400086720375 3.979400086720375 53.37495599317798 0 1.0 1.6989700043360187 0.8494850021680094 0.0 [TA]TP{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{NN|[MP]|[D{I|L}]|[EV]}RR{M(Oxidation (M))|F}[TA];{NN|[MP]|[D{I|L}]|[EV]}RRT{[MS]|[{M(Oxidation (M))|F}A]} 6.7068;0.6239;0.080147 -;-;- 72 + 1 2.263 38909.7 1.0 642 2928 3571 DOHH2_400M_050219_1,3572 DOHH2_400M_050219_1,3572,TATPTPPPP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3573 17.621 463.0 108030.0 25 0 4688.9 + 29904 QSDPTQSGMY 10 104 565.2265909044276 1128.438628875655 2 565.2270995974541 MULTI CID FTMS 0 0 0 3571 114288.0703125 0.5542781673811078 -2 0.0523529052734375 2 Oxidation (M) _QSDPTQSGM(Oxidation (M))Y_ ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1 62.57269311338072 0.0298375429882549 1 SG{M(Oxidation (M))|F}Y 4 6 31.389 0.0 0.0 2.7816 0.0 0.0 656.2754036332707 0.0 656.2754036332707 0.0 4.275625438107578 0.0 0.0 0 0.8494850021680094 0.0 0.3252574989159953 0.0 + SG{M(Oxidation (M))|F}Y 2.7816 + + 502 + 1 2.263 42468.0 1.0 643 2928 3571 DOHH2_400M_050219_1,3573 DOHH2_400M_050219_1,3573,QSDPTQSGMY True False QSDPTQSGMY 17.620567 565.227099597454 1434805.0 3571.0 nc|ENSG00000105856|O60381-3|HBP1;;ENSG00000105856|ENST00000222574|HBP1;;nc|ENSG00000105856|O60381-2|HBP1 6.809134801228841 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3574 17.622 82.0 712080.0 25 0 40865.0 + 26329 NSDINSNHY 9 94 532.2256950983723 1062.4368372635445 2 532.2258788943291 MULTI CID FTMS 0 0 0 3571 554099.25 0.5855219051572902 -4 0.0931262969970703 3 Unmodified _NSDINSNHY_ ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1 75.76082778847304 0.0188720312721366 1 [NS]D{I|L}NSNYH 9 2 + 68.145 0.0 0.0 6.414 6.414 89.355 0.0 0.0 0.0 57.30712373504825 9.665762445130497 9.665762445130497 9.208187539523747 0 0.9247425010840048 1.6989700043360187 0.0 1.1307196863200843 [NS]D{I|L}NSNYH;[NS]D{I|L}GGSNYH;[NS]D{I|L}NSGGYH;[NS]D{I|L}[WE]YH;[NS]D{I|L}GGSGGYH;[NS][KC]SN[NP]{[CP]|[EA]};GGS[KC]SN[NP]{[CP]|[EA]} 6.414;5.5473;5.2411;4.2742;3.6204;3.3395;2.5453 -;-;-;-;-;-;- 341 + 1 2.263 49281.9 1.0 644 2928 3571 DOHH2_400M_050219_1,3574 DOHH2_400M_050219_1,3574,NSDINSNHY True True NSDINSNHY 17.622427 532.225878894329 8549156.0 3571.0 nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1;;ENSG00000135049|ENST00000357081|AGTPBP1 7.2612074216206866 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3576 17.627 48.0 1057800.0 25 0 243170.0 + 15944 ITAKDSAKN 9 61 474.2616349443055 946.5087169554108 2 474.2615539431572 MULTI CID FTMS 0 0 0 3575 1013496.625 0.2654539362549603 7 -0.1380062103271484 1 Unmodified _ITAKDSAKN_ REV__ENSG00000108469|ENST00000317905|RECQL5;REV__nc|ENSG00000108469|O94762-2|RECQL5;REV__nc|ENSG00000108469|O94762-3|RECQL5;REV__nc|ENSG00000108469|O94762-4|RECQL5 18.1463463914782 0.3454829746528889 1 [{I|L}T]AQSVSNK 9 -1 + 72.171 0.0 0.0 7.625 7.625 92.691 0.0 0.0 0.0 60.388661678103645 10.96887856256754 10.96887856256754 9.208187539523756 0 0.8494850021680094 2.0 0.0 0.4247425010840047 [{I|L}T]AQSVSNK;[{I|L}T]A[AG]SVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSGGK;[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP] 7.625;6.6522;6.6522;5.6839;1.8917 -;-;-;-;- 148 + 1 2.263 44254.9 1.0 645 2929 3575 DOHH2_400M_050219_1,3576 DOHH2_400M_050219_1,3576,ITAKDSAKN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3577 17.631 220.0 334300.0 25 0 39278.0 + -1 SENTNHAVY 9 101 517.7868086266992 1033.5590643201983 2 517.7867309451103 MULTI CID FTMS 0 0 0 3575 218485.265625 0.1708103135929226 -13 0.3121528625488281 2 Oxidation (M) _SERALALM(Oxidation (M))K_ nc|ENSG00000036672|O75604-3|USP2;nc|ENSG00000036672|O75604-2|USP2;ENSG00000036672|ENST00000260187|USP2;nc|ENSG00000036672|O75604-4|USP2 20.453626601364224 0.2830276176381075 1 KTT[{I|L}P][WP]K 8 -1 37.29 0.0 0.0 3.6079 0.0 0.0 63.9977963451384 0.0 63.9977963451384 0.0 20.83642667193912 0.0 0.0 0 0.9247425010840048 0.0 1.2302046884880935 0.2887254899964357 KTT[{I|L}P][WP]K 3.6079 - 377 + 1 2.263 64063.1 1.0 646 2929 3575 DOHH2_400M_050219_1,3577 DOHH2_400M_050219_1,3577,SERALALMK False False SENTNHAVY 17.631384 517.78673094511 863472.375 3575.0 nc|ENSG00000036672|O75604-3|USP2;;nc|ENSG00000036672|O75604-2|USP2;;ENSG00000036672|ENST00000260187|USP2;;nc|ENSG00000036672|O75604-4|USP2 2.758497436841329 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3578 17.637 326.0 249610.0 25 0 20336.0 + 38227 TPSAKQSL 8 123 416.2321758346108 830.4497987360216 2 416.2317077517509 MULTI CID FTMS 0 0 0 3575 182542.203125 0.6172524982907961 -2 0.0562801361083984 3 Unmodified _TPSAKQSL_ ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF 39.94969957227396 0.2351327405675156 1 TPSAKQS{I|L} 8 0 + 86.065 0.0 0.0 10.364 10.364 95.285 0.0 0.0 0.0 63.268354676511386 12.91493055190324 12.91493055190324 9.262137858390815 0 0.4957416651753049 2.0 1.075257498915995 0.0 + + TPSAKQS{I|L};TPSAK[AG]S{I|L};TPSA{I|L}[{M(Oxidation (M))|F}V]P;{[RE]|[WV]}A{I|L}{[ET]|[MV]}{I|L};[KA]SQS[{I|L}P]T;{[SA]|[TG]}KQS[{I|L}P]T 10.364;9.2483;6.5974;1.4458;1.0898;0.5279 +;-;-;-;-;- + 201 + 1 2.263 68418.0 1.0 647 2929 3575 DOHH2_400M_050219_1,3578 DOHH2_400M_050219_1,3578,TPSAKQSL False True TPSAKQSL 17.63729 416.231707751751 1280262.625 3575.0 ENST00000586817.5_1_19:1089487-1094188:-|nuORF;;ENSG00000099817|ENST00000615234|POLR2E 3.933282216389974 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3579 17.651 800.0 121900.0 25 0 10263.0 + 17517 KPKDIGQIW 9 116 542.8089164803314 1083.6032800274627 2 542.8086425662041 MULTI CID FTMS 0 0 0 3575 87899.9921875 0.731746274345043 -2 0.0562801361083984 4 Unmodified _KPKDIGQIW_ REV__nc|ENSG00000157890|A6BM72-3|MEGF11 20.453626601364224 0.2830276176381075 1 KPT 3 -1 43.06 0.0 0.0 3.9738 0.0 0.0 0.0 754.3860907048083 754.3860907048083 27.57515625508539 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7614393726401688 0.0 KPT 3.9738 - 90 + 1 2.263 77402.7 0.4699999988079071 648 2929 3575 DOHH2_400M_050219_1,3579 DOHH2_400M_050219_1,3579,KPKDIGQIW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3580 17.665 800.0 274760.0 25 0 28875.0 + 35353 STDKQMGY 8 178 465.2054993496737 928.3964457661474 2 465.2074157595634 MULTI CID FTMS 0 0 0 3575 89197.8828125 0.0173904609522244 -21 0.4953231811523437 5 Unmodified _STDKQMGY_ ENSG00000084623|ENST00000677711|EIF3I 81.89019881105858 0.0835893570953205 1 {[MG]|[TS]}DKQMGY 8 0 + 56.054 0.0 0.0 6.0377 6.0377 89.083 0.0 0.0 0.0 6.989700043360188 12.487352078590192 6.989700043360188 9.262137858390815 0 1.8252574989159955 0.0 0.0 0.2887254899964357 + + {[MG]|[TS]}DKQMGY;{[MG]|[TS]}DK[AG]MGY;AAT{[MG]|[TS]}QMGY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}QMGY;AAT{[MG]|[TS]}QGMY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}QGMY;{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))R]MGY;AATQM{[MG]|[TS]}GY;AAT{[MG]|[TS]}[AG]MGY;{[ES]|[DT]|[{I|L}C]}SKQMGY 6.0377;5.04;4.6926;4.2849;4.2537;3.846;3.7783;3.7284;3.7008;3.5974 +;-;-;-;-;-;-;-;-;- + 975 + 1 2.263 171572.5 0.4199999868869781 649 2929 3575 DOHH2_400M_050219_1,3580 DOHH2_400M_050219_1,3580,STDKQMGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3582 17.67 7.9 5354000.0 25 0 536480.0 + 35496 STMSTNGIPR 10 67 540.2607538020011 1078.506954670802 2 540.2612792849541 MULTI CID FTMS 0 0 0 3581 7752759.5 0.8951517134668224 -2 0.0573768615722656 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 79.59630418116434 0.0173986606250113 1 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR 10 0 + 79.544 0.0 0.0 7.3754 7.3754 81.597 0.0 0.0 0.0 7.269987279362624 0.6694678963061307 0.6694678963061307 0.6694678963061307 0 0.75 0.0 1.1861818737241734 0.3807196863200844 + + {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;[HD]T{[QV]|[N{I|L}]|[RA]|[KV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HV] 7.3754;7.3133;6.5257;6.4636;0.47368 +;-;-;-;- + 177 + 1 2.263 39087.9 1.0 650 2930 3581 DOHH2_400M_050219_1,3582 DOHH2_400M_050219_1,3582,STMSTNGIPR True False STMSTNGIPR 17.669735 540.261279284954 226874682.21875 3581.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 12.049962361653646 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3583 17.671 74.0 771230.0 25 0 95846.0 + 32721 SEAPSGESRKF 11 58 597.7911790763204 1193.5678052194407 2 597.7910644412041 MULTI CID FTMS 0 0 0 3581 697755.3125 0.4610238367826166 4 -0.0836524963378906 2 Unmodified _SEAPSGESRKF_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 19.62595529434964 0.626904505265593 1 {[ES]|[DT]|[{I|L}C]}APSW 6 6 38.416 0.0 0.0 3.2186 0.0 0.0 0.0 533.2855929010374 533.2855929010374 27.44727494896693 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}APSW 3.2186 - 23 + 1 2.263 49424.4 1.0 651 2930 3581 DOHH2_400M_050219_1,3583 DOHH2_400M_050219_1,3583,SEAPSGESRKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3584 17.683 661.0 168610.0 25 0 11950.0 + 32831 SEGKEQRW 8 118 510.2491927413835 1018.4838325495672 2 510.2491332888603 MULTI CID FTMS 0 0 0 3581 128666.1328125 0.6058293983319563 -9 0.1795177459716797 3 Unmodified _SEGKEQRW_ ENSG00000084090|ENST00000337288|STARD7;ENST00000462501.1_1_2:96858901-96861247:-|nuORF;ENST00000488084.1_1_2:96861046-96873890:-|nuORF 47.74868867922204 0.1498366402366518 1 {[ES]|[DT]|[{I|L}C]}GKEQRW 8 0 {[ES]|[DT]|[{I|L}C]} + + 45.868 5.5268 2.5578 4.5036 4.5036 54.872 0.0 0.0 0.0 0.0 24.18604862953321 0.0 0.0 0 1.0941876774005248 0.0 0.3807196863200844 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}GKEQRW 4.5036 + + 434 + 1 2.263 88790.5 1.0 652 2930 3581 DOHH2_400M_050219_1,3584 DOHH2_400M_050219_1,3584,SEGKEQRW False True SEGKEQRW 17.682965 510.24913328886 922205.875 3581.0 ENST00000488084.1_1_2:96861046-96873890:-|nuORF;;ENST00000462501.1_1_2:96858901-96861247:-|nuORF;;ENSG00000084090|ENST00000337288|STARD7 6.629716873168945 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3585 17.695 708.0 202380.0 25 0 53514.0 + 32914 SEKGGMNGY 9 153 471.703197219065 941.39184150493 2 471.7025939822197 MULTI CID FTMS 0 0 0 3581 121797.21875 1.0 0 0.0 4 Unmodified _SEKGGMNGY_ ENSG00000123352|ENST00000552918|SPATS2 21.74664581756881 0.2544899275067181 1 {[MG]|[TS]}[NG]{[ET]|[MV]}NGY 9 3 {[MG]|[TS]}[NG]{[ET]|[MV]}N + + 20.969 -10.988 -1.5624 2.2275 2.2275 49.106 0.0 0.0 0.0 0.0 7.2032592485359785 0.0 0.0 0 0.0 0.0 0.0 0.0 {[MG]|[TS]}[NG]{[ET]|[MV]}NGY 2.2275 - 72 + 1 2.263 112498.1 1.0 653 2930 3581 DOHH2_400M_050219_1,3585 DOHH2_400M_050219_1,3585,SEKGGMNGY False True SEKGGMNGY 17.695244 471.70259398222 539497.375 3581.0 ENSG00000123352|ENST00000552918|SPATS2 1.9681113560994463 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3586 17.709 800.0 204780.0 25 0 31491.0 + 43746 YEAGALER 8 143 454.7273341736218 907.4401154140436 2 454.7268554568291 MULTI CID FTMS 0 0 0 3581 87051.765625 0.3992595302001976 -9 0.1795177459716797 5 Unmodified _YEAGALER_ ENSG00000143578|ENST00000368607|CREB3L4;ENST00000461688.5_1_1:153940632-153942210:+|nuORF;ENST00000492729.1_1_1:153941001-153941837:+|nuORF;nc|ENSG00000143578|Q8TEY5-2|CREB3L4 17.11289562659939 0.6581031263288403 1 YEE{I|L}AQR 7 4 + 90.072 0.0 0.0 9.9259 9.9259 95.248 0.0 0.0 0.0 69.78126116883068 14.985166881913727 14.985166881913727 9.33053210369387 0 0.7742275032520141 2.0 0.7742275032520141 0.791235974569971 YEE{I|L}AQR;YEE{I|L}A[AG]R;[VG]S[{I|L}P]{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y;[VG]S{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}P]Y;Y{M(Oxidation (M))|F}[SG][{I|L}P]QP;{[RE]|[WV]}A[Q{I|L}]EY;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}P][SG]EY;Y[YQ][{I|L}P]QP;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}P]{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y;Y{M(Oxidation (M))|F}[HV]{[ET]|[MV]}{I|L} 9.9259;8.8977;2.0039;1.5296;1.4094;1.225;0.76558;0.64966;0.39095;0.13303 -;-;-;-;-;-;-;-;-;- 341 + 1 2.263 128908.7 0.8600000143051147 654 2930 3581 DOHH2_400M_050219_1,3586 DOHH2_400M_050219_1,3586,YEAGALER False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3588 17.714 49.0 1207800.0 25 0 101230.0 + 32723 SEAPSGESRKF 11 78 398.8634193893099 1193.5684287681297 3 398.8631469607353 MULTI CID FTMS 0 0 0 3587 930093.8125 0.2704799954052119 6 -0.0553798675537109 1 Unmodified _SEAPSGESRKF_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 24.881564428377168 0.5079759154518888 1 {[ES]|[DT]|[{I|L}C]}APSW 6 6 41.031 0.0 0.0 3.4377 0.0 0.0 0.0 533.2850395357817 533.2850395357817 35.546218740408904 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.0 {[ES]|[DT]|[{I|L}C]}APSW 3.4377 - 38 + 1 2.263 53973.5 1.0 655 2931 3587 DOHH2_400M_050219_1,3588 DOHH2_400M_050219_1,3588,SEAPSGESRKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3589 17.716 101.0 479830.0 25 0 23489.0 + 7183 EEQAVRPKY 9 79 560.2931531520668 1118.5717533709335 2 560.2933837771416 MULTI CID FTMS 0 0 0 3587 466851.84375 0.5103539346858041 2 -0.0356502532958984 2 Unmodified _EEQAVRPKY_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 71.92227651296345 0.0203558744033348 1 EEQAVRPKY 9 0 + 70.225 0.0 0.0 6.2781 6.2781 89.026 0.0 0.0 0.0 51.17423111099761 12.98332479720628 12.98332479720628 9.208187539523747 0 1.0114393726401687 1.6989700043360187 0.0 0.4247425010840047 + + EEQAVRPKY;EE[AG]AVRPKY;[KP]RVA[YE]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.2781;5.4549;0.12272 +;-;- + 135 + 1 2.263 40669.5 1.0 656 2931 3587 DOHH2_400M_050219_1,3589 DOHH2_400M_050219_1,3589,EEQAVRPKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3590 17.717 44.0 1197600.0 25 0 245190.0 26832 PARTPAPAP 9 84 439.2483728380357 876.4821927428715 2 439.2480651736259 MULTI CID FTMS 0 0 0 3587 846611.375 0.6397285270714933 -9 0.2088127136230468 3 Unmodified _PARTPAPAP_ ENSG00000169733|ENST00000310496|RFNG;ENST00000582478.5_1_17:80008786-80009642:-|nuORF 19.256988751693697 0.3154191944385105 1 [PA]A[HK]VTGP 9 6 [PA]A[HK]V + + 30.445 -15.73 -2.6071 3.4736 3.4736 51.643 0.0 0.0 0.0 0.0 16.279904017784744 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [PA]A[HK]VTGP 3.4736 - 129 + 1 2.263 44954.0 1.0 657 2931 3587 DOHH2_400M_050219_1,3590 DOHH2_400M_050219_1,3590,PARTPAPAP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3591 17.722 258.0 227170.0 25 0 11024.0 + 713 AEPDNKNVY 9 105 525.2501100771772 1048.4856672211542 2 525.2494994997978 MULTI CID FTMS 0 0 0 3587 146787.921875 0.7934104991460288 -1 0.0441131591796875 4 Unmodified _AEPDNKNVY_ ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2 13.90604991867851 0.4602628045680013 1 [DP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VCPY 9 6 [DP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VCP + + 15.485 3.5973 0.41471 1.4768 1.4768 48.53 0.0 0.0 0.0 0.0 -10.163800089887545 -10.163800089887545 0.0 0 0.0 0.0 0.0 0.0 [DP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VCPY 1.4768 - 281 + 1 2.263 51644.3 1.0 658 2931 3587 DOHH2_400M_050219_1,3591 DOHH2_400M_050219_1,3591,AEPDNKNVY False True AEPDNKNVY 17.722045 525.249499499798 4430581.0 3587.0 ENSG00000118705|ENST00000237530|RPN2;;nc|ENSG00000118705|P04844-2|RPN2 1.5844128926595051 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3593 17.727 93.0 767220.0 25 0 54352.0 -1 0 91 429.23366505090354 428.2263885843036 1 429.2330810427666 MULTI CID FTMS 0 0 0 3592 593602.6875 0.2315659910836184 -61 1.286550521850586 1 1 H 1 -1 9.8329 0.0 0.0 2.2962 0.0 0.0 273.1593700069582 0.0 273.1593700069582 0.0 1.464560527209006 0.0 0.0 0 0.0 0.0 0.0 0.0 H 2.2962 - 4 + 1 2.263 61445.3 1.0 659 2932 3592 DOHH2_400M_050219_1,3593 DOHH2_400M_050219_1,3593, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3594 17.731 215.0 371340.0 25 0 43563.0 + 17581 KPTAAFHLL 9 85 499.2930196942723 996.5714864553446 2 499.2924682497978 MULTI CID FTMS 0 0 0 3592 211259.578125 0.0016117742097804 -20 0.5442886352539062 2 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 1 KPT 3 -1 43.94 0.0 0.0 4.4091 0.0 0.0 0.0 667.3530650827048 667.3530650827048 29.257505708169585 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 KPT 4.4091 + + 54 + 1 2.263 66243.6 1.0 660 2932 3592 DOHH2_400M_050219_1,3594 DOHH2_400M_050219_1,3594,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3595 17.745 800.0 150790.0 25 0 14652.0 -1 0 64 575.2903524186548 2871.415379760274 5 575.4904052615166 MULTI CID FTMS 0 0 0 3592 70644.3125 0.6271085528439677 -17 0.4571685791015625 3 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Q 4 -1 24.693 0.0 0.0 0.85995 0.0 0.0 0.0 2383.160777059355 2383.160777059355 7.703037561203843 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Q 0.85995 - 66 1 2.263 99011.5 0.4300000071525574 661 2932 3592 DOHH2_400M_050219_1,3595 DOHH2_400M_050219_1,3595, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3599 17.76 288.0 359500.0 25 0 30199.0 + 7890 ELNKRGRVL 9 118 362.22470706552815 1083.6522917967843 3 362.2240783572197 MULTI CID FTMS 0 0 0 3598 141736.390625 0.7329647903137224 2 -0.0118312835693359 1 Unmodified _ELNKRGRVL_ ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28 36.12702656103203 0.0967173616627612 1 E{I|L}{I|L}{[RE]|[WV]}RR{I|L} 8 4 + 46.08 0.0 0.0 4.2523 4.2523 86.724 0.0 0.0 0.0 21.30387817565364 1.6554624884906843 1.6554624884906843 46.08017516893504 0 0.5 1.6989700043360187 0.0 0.4247425010840047 E{I|L}{I|L}{[RE]|[WV]}RR{I|L} 4.2523 - 71 + 1 2.263 83927.0 1.0 662 2935 3598 DOHH2_400M_050219_1,3599 DOHH2_400M_050219_1,3599,ELNKRGRVL True True ELNKRGRVL 17.760431 362.22407835722 670544.75 3598.0 ENST00000601150.5_1_19:59059168-59060232:+|nuORF;;ENSG00000130726|ENST00000253024|TRIM28;;nc|ENSG00000130726|Q13263-2|TRIM28 4.1715437571207685 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3602 17.77 64.0 711580.0 25 0 45574.0 + 12338 GTAAGEKLK 9 80 437.7535229973773 873.4924930615546 2 437.7533752322197 MULTI CID FTMS 0 0 0 3601 847988.9375 0.8554775203766521 3 -0.0154094696044921 1 Unmodified _GTAAGEKLK_ ENSG00000131721|ENST00000371388|RHOXF2;ENSG00000203989|ENST00000371402|RHOXF2B 34.40172386719151 0.1061884637610825 1 {[SA]|[TG]}AQVG{I|L}TK 9 5 + 85.2 0.0 0.0 9.7539 9.7539 94.124 0.0 0.0 0.0 68.17410004652736 14.64719041932895 14.64719041932895 9.208187539523747 0 0.805462187404089 2.0 0.3252574989159953 0.7059771852360797 {[SA]|[TG]}AQVG{I|L}TK;{[SA]|[TG]}A[AG]VG{I|L}TK 9.7539;8.6997 -;- 97 + 1 2.263 42074.4 1.0 663 2937 3601 DOHH2_400M_050219_1,3602 DOHH2_400M_050219_1,3602,GTAAGEKLK True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3604 17.775 30.0 1616700.0 25 0 290810.0 + 35365 STDPRPASY 9 57 497.2355154838741 992.4564780345482 2 497.2355834841728 MULTI CID FTMS 0 0 0 3603 1935361.625 0.526559271367255 8 -0.0676422119140625 1 Unmodified _STDPRPASY_ ENSG00000103126|ENST00000262320|AXIN1;nc|ENSG00000103126|O15169-2|AXIN1 31.26834338654808 0.1333407332142048 1 {[MG]|[TS]}DPR[PA]SY 9 0 + 35.142 0.0 0.0 3.5409 3.5409 82.029 0.0 0.0 0.0 20.537815606776924 7.368800006334347 7.368800006334347 13.979400086720378 0 0.7059771852360797 0.0 0.0 0.0 + + {[MG]|[TS]}DPR[PA]SY;{[MG]|[TS]}DPR[DV]{[CT]|[{M(Oxidation (M))|F}G]} 3.5409;2.1323 +;- + 63 + 1 2.263 44362.8 1.0 664 2938 3603 DOHH2_400M_050219_1,3604 DOHH2_400M_050219_1,3604,STDPRPASY False True STDPRPASY 17.774651 497.235583484173 36837680.0 3603.0 nc|ENSG00000103126|O15169-2|AXIN1;;ENSG00000103126|ENST00000262320|AXIN1 7.001165548960368 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3605 17.776 39.0 1303600.0 25 0 80643.0 + 28331 PSAHCPASTV 10 86 485.2265511795771 968.4385494259542 2 485.2267944216728 MULTI CID FTMS 0 0 0 3603 1442189.0 0.9530770996648724 6 -0.0444107055664062 2 Unmodified _PSAHCPASTV_ REV__ENST00000295404.9_1_19:50194996-50204826:+|nuORF 22.736283301280096 0.4578556481593033 1 SP[WE]HNS{I|L} 8 -1 + 49.693 0.0 0.0 5.1313 5.1313 85.764 0.0 0.0 0.0 13.57870170445927 6.862111031303535 6.862111031303535 9.262137858390815 0 1.3494850021680094 2.0 0.2887254899964357 0.0 SP[WE]HNS{I|L};SP[WE]HGGS{I|L};[PS]A[HS]SP{[WT]|[RM]};SP{[WN]|[YH]}{[YC]|[HE]}S{I|L};S[W{M(Oxidation (M))|F}]{I|L}CNS{I|L};[PA]S[HS]SP{[WT]|[RM]};S[WQ][WY]S{I|L};S[W{M(Oxidation (M))|F}]{I|L}CGGS{I|L} 5.1313;4.1749;3.7149;3.6255;2.4293;1.8966;1.5743;1.4729 -;-;-;-;-;-;-;- 411 + 1 2.263 42355.5 1.0 665 2938 3603 DOHH2_400M_050219_1,3605 DOHH2_400M_050219_1,3605,PSAHCPASTV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3609 17.79 171.0 551080.0 25 0 124450.0 -1 LSVHEVVEKQ 10 87 403.88790314917657 1208.6418800477295 3 403.8877441287041 MULTI CID FTMS 0 0 0 3608 168477.15625 0.6652874559219691 -2 0.0080375671386718 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSVHEVVEKQ_ ENST00000342315.8_1_12:113424985-113425036:+|nuORF 9.38312468134398 0.6832340498775793 1 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 -1 33.389 0.0 0.0 2.7626 0.0 0.0 0.0 394.221784393842 394.221784393842 21.606663302044904 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 2.7626 - 130 + 1 2.263 77213.7 1.0 666 2941 3608 DOHH2_400M_050219_1,3609 DOHH2_400M_050219_1,3609,LSVHEVVEKQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3610 17.794 227.0 201480.0 25 0 16885.0 -1 0 99 460.2388488225457 459.2315723559457 1 460.2384216189384 MULTI CID FTMS 0 0 0 3608 196594.921875 0.3900468462628142 -89 1.6660499572753906 2 1 NW 2 -1 14.693 0.0 0.0 3.1994 0.0 0.0 141.10036005301447 0.0 141.10036005301447 0.0 6.154017961346412 0.0 0.0 0 0.0 0.0 0.0 0.0 NW 3.1994 - 17 + 1 2.263 39569.6 1.0 667 2941 3608 DOHH2_400M_050219_1,3610 DOHH2_400M_050219_1,3610, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3613 17.814 800.0 135090.0 25 0 34971.0 + 20174 LKSCGLHVTSI 11 103 579.3226748101868 1156.6307966871734 2 579.3231689333916 MULTI CID FTMS 0 0 0 3612 115522.6796875 1.0 0 0.0 1 Unmodified _LKSCGLHVTSI_ ENSG00000171793|ENST00000650070|CTPS1 26.020703789607367 0.4812285719068541 1 TS{I|L} 3 8 29.882 0.0 0.0 2.5835 0.0 0.0 837.4574733617252 0.0 837.4574733617252 0.0 14.397489324369044 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 + TS{I|L} 2.5835 + + 86 1 2.263 85119.0 0.5600000023841858 668 2943 3612 DOHH2_400M_050219_1,3613 DOHH2_400M_050219_1,3613,LKSCGLHVTSI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3616 17.824 156.0 488950.0 25 0 48756.0 + -1 LTGWPLTMK 9 110 531.7848218021753 1061.5550906711503 2 531.7844726443291 MULTI CID FTMS 0 0 0 3615 306213.5 0.7177430531037884 -5 0.0382633209228515 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 22.736283301280096 0.2418982879461534 1 [NS][KQ][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 49.917 0.0 0.0 4.7022 4.7022 86.748 0.0 0.0 0.0 9.387320432199488 12.894680962404124 9.387320432199488 19.50318762307696 0 0.805462187404089 1.3979400086720375 0.6237125054200234 0.5501648626366046 [NS][KQ][{I|L}P]T{M(Oxidation (M))|F}K;[NS][KQ][{I|L}P]R[YG];[KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;[NS][KQ][{I|L}P]GV[YG];[NS][KQ][RH][RH];[HT]VG[{I|L}P]S[HS]K;[KT][{M(Oxidation (M))|F}V][RH]{M(Oxidation (M))|F}K;[HT]V[RK]{M(Oxidation (M))|F}{M(Oxidation (M))|F}K;[KT]T{[TV]|[{I|L}S]}HR[YG];[RH][RV][YG]{M(Oxidation (M))|F}K 4.7022;2.865;2.7739;2.6842;2.0138;1.8036;1.5196;1.4774;0.93669;0.76922 -;-;-;-;-;-;-;-;-;- 486 1 2.263 64382.6 1.0 669 2945 3615 DOHH2_400M_050219_1,3616 DOHH2_400M_050219_1,3616,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3617 17.838 800.0 125090.0 25 0 7224.6 -1 0 75 628.7848714566691 2511.110379960276 4 629.2868530154228 MULTI CID FTMS 0 0 0 3615 70340.2578125 0.2209390809007969 -6 0.0422821044921875 2 1 DD 2 -1 19.776 0.0 0.0 0.78755 0.0 0.0 744.3298285335187 1533.7036250543922 2278.033453587911 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 DD 0.78755 - 19 + 1 2.263 77390.4 0.4699999988079071 670 2945 3615 DOHH2_400M_050219_1,3617 DOHH2_400M_050219_1,3617, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3620 17.846 63.0 1546100.0 25 0 232190.0 17507 KPHAFAVP 8 85 433.74588396686295 865.4772150005259 2 433.7458068728447 MULTI CID FTMS 0 0 0 3619 894816.5625 0.1370610180590019 -4 0.0435676574707031 1 Unmodified _KPHAFAVP_ ENSG00000181827|ENST00000559447|RFX7;nc|ENSG00000181827|Q2KHR2-1|RFX7;nc|ENSG00000181827|Q2KHR2-2|RFX7 20.871210003555333 0.6025813472596342 1 [VG]PTQGTAA 9 8 43.479 0.0 0.0 5.0237 0.0 0.0 0.0 80.0513170831664 80.0513170831664 17.509495028792976 0.0 0.0 0.0 0 1.024227503252014 1.6989700043360187 0.3807196863200844 0.0 [VG]PTQGTAA 5.0237 - 363 + 1 2.263 81083.2 1.0 671 2947 3619 DOHH2_400M_050219_1,3620 DOHH2_400M_050219_1,3620,KPHAFAVP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3621 17.86 800.0 247060.0 25 0 14690.0 + 8254 EQHARNDPL 9 200 360.5126876915843 1078.516233674953 3 360.5122253298759 MULTI CID FTMS 0 0 0 3619 83132.53125 0.2207001467771903 -6 0.0575885772705078 2 Unmodified _EQHARNDPL_ ENSG00000176533|ENST00000382159|GNG7;ENST00000587867.1_1_19:2515022-2517002:-|nuORF 15.847184025352805 0.4077185912009129 1 DHPC(Carbamidomethyl (C))P{I|L} 6 6 32.51 0.0 0.0 3.0143 0.0 0.0 341.1863543502074 0.0 341.1863543502074 0.0 19.015318870489462 0.0 0.0 0 0.5994850021680094 0.0 0.5 0.0 DHPC(Carbamidomethyl (C))P{I|L} 3.0143 - 279 1 2.263 162209.8 0.5400000214576721 672 2947 3619 DOHH2_400M_050219_1,3621 DOHH2_400M_050219_1,3621,EQHARNDPL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3624 17.873 393.0 309970.0 25 0 86752.0 2609 ASPLHPPLPS 10 109 508.28161292367423 1014.5486729141484 2 508.2817870974541 MULTI CID FTMS 0 0 0 3623 101462.6640625 0.5231003667802804 -1 0.0039386749267578 1 Unmodified _ASPLHPPLPS_ ENSG00000125900|ENST00000381623|SIRPD 20.453626601364224 0.5043500229302764 1 HPKY 4 8 30.662 0.0 0.0 3.0222 0.0 0.0 0.0 486.25473852955713 486.25473852955713 0.2899156374684253 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 HPKY 3.0222 - 646 + 1 2.263 96300.9 1.0 673 2949 3623 DOHH2_400M_050219_1,3624 DOHH2_400M_050219_1,3624,ASPLHPPLPS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3625 17.887 800.0 164520.0 25 0 8933.7 + 4741 DEGSGEGHKW 10 144 551.2331066425297 1100.4516603518591 2 551.2322265505791 MULTI CID FTMS 0 0 0 3623 127755.109375 0.4557038565071807 -2 0.0223312377929687 2 Unmodified _DEGSGEGHKW_ ENSG00000170242|ENST00000527733|USP47;ENST00000531513.5_1_11:11964592-11970195:+|nuORF;nc|ENSG00000170242|Q96K76-2|USP47;nc|ENSG00000170242|Q96K76|USP47 78.06048673739656 0.0186573233964999 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSGEGHKW 10 0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} + + 58.32 3.7236 1.5257 5.2996 5.2996 57.614 0.0 0.0 0.0 0.0 17.0205343810445 0.0 0.0 0 2.024227503252014 0.0 1.0044321917401078 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSGEGHKW 5.2996 + + 3351 + 1 2.263 102419.3 0.7300000190734863 674 2949 3623 DOHH2_400M_050219_1,3625 DOHH2_400M_050219_1,3625,DEGSGEGHKW True True DEGSGEGHKW 17.887203 551.232226550579 1254492.125 3623.0 ENSG00000170242|ENST00000527733|USP47;;ENST00000531513.5_1_11:11964592-11970195:+|nuORF;;nc|ENSG00000170242|Q96K76|USP47;;nc|ENSG00000170242|Q96K76-2|USP47 8.037792364756266 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3626 17.901 800.0 102210.0 25 0 5300.0 -1 VGTGTNACYME 11 137 581.2318661869947 1160.4491794407893 2 581.2324096560478 MULTI CID FTMS 0 0 0 3623 85652.3671875 0.3560995894989902 -2 0.0223312377929687 3 Oxidation (M) _VGTGTNACYM(Oxidation (M))E_ ENSG00000160883|ENST00000292432|HK3 17.11289562659939 0.6791789249425932 1 {[QS]|[NT]}V[SG]AVE 8 -1 63.367 0.0 0.0 5.4606 0.0 0.0 0.0 400.0625191196365 400.0625191196365 46.377354143384 0.0 0.0 0.0 0 1.0 1.6989700043360187 1.5279832216481406 1.7786596949921218 {[QS]|[NT]}V[SG]AVE 5.4606 - 1398 1 2.263 64237.1 0.6399999856948853 675 2949 3623 DOHH2_400M_050219_1,3626 DOHH2_400M_050219_1,3626,VGTGTNACYME False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3628 17.908 263.0 405050.0 25 0 37979.0 + -1 IQRLETMK 8 99 517.7868086266992 1033.5590643201983 2 517.7868530154228 MULTI CID FTMS 0 0 0 3627 231733.96875 0.1811680607343931 8 -0.2547855377197265 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 1 KTT[{I|L}P][WP]K 8 -1 42.128 0.0 0.0 4.076 0.0 0.0 63.9963413458109 0.0 63.9963413458109 0.0 19.692693507144018 0.0 0.0 0 0.9247425010840048 0.0 1.25 0.25 KTT[{I|L}P][WP]K 4.076 - 342 + 1 2.263 85404.0 1.0 676 2950 3627 DOHH2_400M_050219_1,3628 DOHH2_400M_050219_1,3628,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3629 17.916 448.0 195630.0 25 0 11486.0 + 32969 SEMAGPPQM 9 118 482.1996055984488 962.3846582636976 2 482.1990844607353 MULTI CID FTMS 0 0 0 3627 214212.375 1.0 0 0.0 2 Oxidation (M) _SEMAGPPQM(Oxidation (M))_ ENSG00000174231|ENST00000304992|PRPF8 54.773552608820026 0.0299037012502309 1 {[ES]|[DT]|[{I|L}C]}MAGPPQ{M(Oxidation (M))|F} 9 0 {[ES]|[DT]|[{I|L}C]}M + + 45.394 11.92 3.434 4.7168 4.7168 55.613 0.0 0.0 0.0 0.0 29.15205560610346 0.0 0.0 0 0.4247425010840047 0.0 0.0 1.0 + + {[ES]|[DT]|[{I|L}C]}MAGPPQ{M(Oxidation (M))|F} 4.7168 + + 261 + 1 2.263 72272.5 1.0 677 2950 3627 DOHH2_400M_050219_1,3629 DOHH2_400M_050219_1,3629,SEMAGPPQM True False SEMAGPPQM 17.91597 482.199084460735 622078.8125 3627.0 ENSG00000174231|ENST00000304992|PRPF8 8.211630821228027 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3630 17.929 742.0 341530.0 25 0 30906.0 -1 0 75 503.4292190365883 2512.1097128499414 5 503.4284850955009 MULTI CID FTMS 0 0 0 3627 132438.6875 0.9305872253565398 -2 0.0407390594482421 3 1 W 1 -1 16.99 0.0 0.0 0.67631 0.0 0.0 2308.019592465956 0.0 2308.019592465956 0.0 7.525749891599531 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.67631 - 63 + 1 2.263 197316.3 1.0 678 2950 3627 DOHH2_400M_050219_1,3630 DOHH2_400M_050219_1,3630, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3631 17.943 800.0 138170.0 25 0 10576.0 + + 8466 VSEGTKAVTKY 11 161 395.21752039315226 0 395.2171813845634 PEAK CID FTMS 0 0 0 3627 87385.3046875 1.0 0 0.0 4 Unmodified _ESTFIPAKKY_ ENSG00000277224|ENST00000356530|H2BC7;ENSG00000274641|ENST00000616182|H2BC17;HIST1H2BK|p.H110Y|1|0.11|ENSG00000197903|chr6:27146471-27146471|G/A|missense_variant;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000146047|ENST00000274764|H2BC1;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000124635|ENST00000339812|H2BC11;ENSG00000234289|ENST00000599962|H2BC12L;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000185130|ENST00000377401|H2BC13;nc|ENSG00000285480|A0A2R8Y619|H2BK1;ENSG00000184678|ENST00000369155|H2BC21 10.823927491677226 0.3685635357628707 1 D 1 -1 6.8667 0.0 0.0 0.87094 0.0 0.0 394.2431329720483 276.1249181258759 670.3680510979242 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 D 0.87094 - 27 + 1 2.263 90068.2 0.9399999976158142 679 2950 3627 DOHH2_400M_050219_1,3631 DOHH2_400M_050219_1,3631,ESTFIPAKKY False False VSEGTKAVTKY 17.942638 395.217181384563 1996924.625 3627.0 ENSG00000277224|ENST00000356530|H2BC7;;ENSG00000274641|ENST00000616182|H2BC17;;HIST1H2BK|p.H110Y|1|0.11|ENSG00000197903|chr6:27146471-27146471|G/A|missense_variant;;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;;ENSG00000273802|ENST00000541790|H2BC8;;ENSG00000274290|ENST00000614097|H2BC6;;nc|ENSG00000203814|Q5QNW6-2|H2BC18;;ENSG00000203814|ENST00000369167|H2BC18;;ENSG00000233822|ENST00000612898|H2BC15;;ENSG00000146047|ENST00000274764|H2BC1;;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;;ENSG00000276410|ENST00000615966|H2BC3;;ENSG00000124635|ENST00000339812|H2BC11;;ENSG00000234289|ENST00000599962|H2BC12L;;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;;ENSG00000275713|ENST00000619466|H2BC9;;ENSG00000196890|ENST00000693095|H2BC26;;ENSG00000158373|ENST00000377777|H2BC5;;ENSG00000273703|ENST00000621112|H2BC14;;ENSG00000278588|ENST00000377733|H2BC10;;ENSG00000180596|ENST00000396984|H2BC4;;ENSG00000197903|ENST00000356950|H2BC12;;ENSG00000185130|ENST00000377401|H2BC13;;nc|ENSG00000285480|A0A2R8Y619|H2BK1;;ENSG00000184678|ENST00000369155|H2BC21 3.730609893798828 3.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3633 17.947 32.0 1092600.0 25 0 95306.0 + 35497 STMSTNGIPR 10 68 540.2607538020011 1078.506954670802 2 540.2614623904228 MULTI CID FTMS 0 0 0 3632 1720942.375 0.1987040247745222 19 -0.3365116119384765 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 47.594388314883695 0.0942698883389255 1 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 70.706 0.0 0.0 6.5559 6.5559 82.128 0.0 0.0 0.0 7.269987279362624 2.552725051033065 2.552725051033065 2.552725051033065 0 0.5 0.0 0.4247425010840047 0.7302046884880937 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STNGR{I|L}P;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGGR{I|L}P 6.5559;6.3192;5.7605;5.7062;5.4695;4.9108 -;+;-;-;-;- + 180 + 1 2.249 33242.6 1.0 680 2951 3632 DOHH2_400M_050219_1,3633 DOHH2_400M_050219_1,3633,STMSTNGIPR True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3634 17.948 15.0 2572000.0 25 0 225280.0 + 35354 STDKQMGY 8 70 465.2054993496737 928.3964457661474 2 465.2054626345634 MULTI CID FTMS 0 0 0 3632 4390336.0 0.8559616480543375 1 -0.0749797821044921 2 Unmodified _STDKQMGY_ ENSG00000084623|ENST00000677711|EIF3I 34.10243960390752 0.3329570729325616 1 {[MG]|[TS]}[Y{I|L}][EP]GY 8 4 + 22.72 0.0 0.0 2.4473 2.4473 81.008 0.0 0.0 0.0 1.7512841890908248 2.198690202528013 1.7512841890908248 22.720384319171387 0 0.3054621874040891 0.0 0.0 0.0 {[MG]|[TS]}[Y{I|L}][EP]GY 2.4473 - 129 + 1 2.249 36296.4 1.0 681 2951 3632 DOHH2_400M_050219_1,3634 DOHH2_400M_050219_1,3634,STDKQMGY False True STDKQMGY 17.948184 465.205462634563 78898656.0 3632.0 ENSG00000084623|ENST00000677711|EIF3I 6.089845021565755 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3635 17.951 140.0 1014100.0 25 0 215400.0 + 17555 KPPPGGSR 8 127 398.227886983306 794.441221033412 2 398.2274352908134 MULTI CID FTMS 0 0 0 3632 367162.03125 0.9482509609273329 -1 0.04150390625 3 Unmodified _KPPPGGSR_ REV__ENSG00000147274|ENST00000320676|RBMX;REV__ENSG00000169800|ENST00000303766|RBMY1F;REV__ENSG00000226941|ENST00000250831|RBMY1J;REV__ENSG00000234414|ENST00000382707|RBMY1A1;REV__ENSG00000242389|ENST00000382659|RBMY1E;REV__ENSG00000242875|ENST00000383020|RBMY1B;REV__ENSG00000244395|ENST00000382680|RBMY1D;REV__nc|ENSG00000147274|P38159-2|RBMX;REV__nc|ENSG00000226941|Q15415-2|RBMY1F;REV__nc|ENSG00000234414|P0DJD3-2|RBMY1A1;REV__nc|ENSG00000234414|P0DJD3-3|RBMY1A1;REV__nc|ENSG00000244395|P0C7P1-2|RBMY1D;REV__nc|ENSG700|P0DJD4|RBMY1C 20.453626601364224 0.6087503291685402 1 KPTYP 5 -1 53.315 0.0 0.0 6.7111 0.0 0.0 0.0 205.0989779108032 205.0989779108032 20.45371572735597 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7614393726401688 0.0 KPTYP 6.7111 - 454 + 1 2.249 112153.5 1.0 682 2951 3632 DOHH2_400M_050219_1,3635 DOHH2_400M_050219_1,3635,KPPPGGSR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3636 17.954 178.0 374250.0 25 0 47600.0 + 6304 DVHKKYNAL 9 91 363.2016566153089 1086.583140446127 3 363.2014343142509 MULTI CID FTMS 0 0 0 3632 352514.4375 0.2782518389769277 -3 0.0822429656982421 4 Unmodified _DVHKKYNAL_ ENSG00000055130|ENST00000325222|CUL1 18.13498045792455 0.3457906370836843 1 {I|L} 1 8 15.485 0.0 0.0 1.4251 0.0 0.0 955.487923626594 0.0 955.487923626594 0.0 5.563025007672875 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4251 + + 98 + 1 2.249 59149.5 1.0 683 2951 3632 DOHH2_400M_050219_1,3636 DOHH2_400M_050219_1,3636,DVHKKYNAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3637 17.968 800.0 232020.0 25 0 21625.0 + 27523 PKRGANVEIA 10 131 527.8039009319688 1053.5932489307374 2 527.8055297732353 MULTI CID FTMS 0 0 0 3632 163254.828125 0.6192562246212028 -1 0.04150390625 5 Unmodified _PKRGANVEIA_ REV__ENSG00000196526|ENST00000420658|AFAP1;REV__ENST00000505447.5_1_4:7765494-7780765:-|nuORF;REV__ENST00000513842.1_1_4:7765494-7800689:-|nuORF;REV__nc|ENSG00000196526|Q8N556|AFAP1 17.11289562659939 0.5604042439455784 1 KPTGG 5 -1 46.841 0.0 0.0 4.4458 0.0 0.0 0.0 610.3289888971311 610.3289888971311 27.869908141996813 0.0 0.0 0.0 0 0.6139829889124311 0.0 0.4247425010840047 0.0 KPTGG 4.4458 - 416 + 1 2.249 143602.1 0.7300000190734863 684 2951 3632 DOHH2_400M_050219_1,3637 DOHH2_400M_050219_1,3637,PKRGANVEIA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3638 17.982 800.0 199210.0 25 0 12546.0 + 6306 DVHKKYNAL 9 153 544.2979421738404 1086.5813314144807 2 544.2991821169853 MULTI CID FTMS 0 0 0 3632 150160.078125 0.3544973948978907 -4 0.1006355285644531 6 Unmodified _DVHKKYNAL_ ENSG00000055130|ENST00000325222|CUL1 82.5293158979368 0.0169039238599547 1 DVHKKYNA{I|L} 9 0 + 71.936 0.0 0.0 6.6204 6.6204 91.229 0.0 0.0 0.0 36.996386363193466 5.691650903716678 5.691650903716678 10.42505534665277 0 1.4709587969248012 2.0 0.0 0.6694451763165201 + + DVHKKYNA{I|L};[DV]HKKYNA{I|L};DVHK[K{I|L}]{[QG]|[NA]}Y;[HV]DKKYNA{I|L};{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}KKYNA{I|L};DV{I|L}[EP]KK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}K[YV][DV]{I|L};{[QG]|[NA]}YKKH[DV]{I|L};[YN]KKHA[DV]{I|L};[YN]AKKH[DV]{I|L} 6.6204;5.661;4.8185;4.1712;3.4218;3.2425;3.2106;2.8575;2.4081;2.3871 +;+;-;-;-;-;-;-;-;- + 1470 + 1 2.249 119306.9 0.7099999785423279 685 2951 3632 DOHH2_400M_050219_1,3638 DOHH2_400M_050219_1,3638,DVHKKYNAL True True DVHKKYNAL 17.982108 544.299182116985 10872340.0 3632.0 ENSG00000055130|ENST00000325222|CUL1 6.438474178314209 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3639 17.99 431.0 157940.0 25 0 21791.0 + 13574 HPLAETELW 9 71 548.2761599490549 1094.5377669649097 2 548.2764770388603 MULTI CID FTMS 0 0 0 3632 143617.5 0.699068362143015 -1 0.04150390625 7 Unmodified _HPLAETELW_ REV__ENSG00000177932|ENST00000315475|ZNF354C 4.75600775471527 0.7486543447549536 1 KPT 3 -1 24.693 0.0 0.0 2.256 0.0 0.0 97.96315122236996 667.3549898736936 765.3181410960636 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 KPT 2.256 - 21 + 1 2.249 56835.1 1.0 686 2951 3632 DOHH2_400M_050219_1,3639 DOHH2_400M_050219_1,3639,HPLAETELW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3640 17.999 509.0 410840.0 25 0 81614.0 17733 KPVSQAFSR 9 115 510.2835528716985 1018.552552810197 2 510.2805969119072 MULTI CID FTMS 0 0 0 3632 142935.96875 0.7334492101425856 -2 0.0783042907714843 8 Unmodified _KPVSQAFSR_ nc|ENSG00000162222|Q8N5M4-2|TTC9C 16.149105407346934 0.3995459350917656 1 {I|L}A{I|L}NQA 6 7 25.94 0.0 0.0 2.5468 0.0 0.0 0.0 405.1773165338501 405.1773165338501 11.33593778117195 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}A{I|L}NQA 2.5468 - 450 + 1 2.249 162263.3 1.0 687 2951 3632 DOHH2_400M_050219_1,3640 DOHH2_400M_050219_1,3640,KPVSQAFSR False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 3641 18.003 204.0 420960.0 25 0 112530.0 -1 0 92 490.2854974921961 489.2782210255961 1 490.2857238650322 MULTI CID FTMS 0 0 0 3632 277268.28125 0.1147055101762625 -185 2.9303102493286133 9 1 W 1 -1 13.099 0.0 0.0 2.6772 0.0 0.0 285.1875208076258 0.0 285.1875208076258 0.0 -0.8804562952784067 -0.8804562952784067 0.0 0 0.0 0.0 0.0 0.0 W 2.6772 - 16 + 1 2.249 72620.9 1.0 688 2951 3632 DOHH2_400M_050219_1,3641 DOHH2_400M_050219_1,3641, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3642 18.018 800.0 93866.0 25 0 7154.3 -1 QNCHICKLHV 10 102 626.3088396350519 0 626.3081542849541 PEAK CID FTMS 0 0 0 3632 105391.84375 1.0 0 0.0 10 Carbamidomethyl (C) _QNCHIC(Carbamidomethyl (C))KLHV_ ENST00000264893.10_1_4:77959493-77959589:+|nuORF 14.838274106304384 0.3381107837965078 1 NQEQ 4 -1 46.216 0.0 0.0 3.6955 0.0 0.0 368.1352384810726 380.2424696617135 748.3777081427861 0.0 0.0 0.0 0.0 0 1.610924374808178 0.0 0.0 0.9674165578762486 NQEQ 3.6955 - 207 + 1 2.249 61559.0 0.5899999737739563 689 2951 3632 DOHH2_400M_050219_1,3642 DOHH2_400M_050219_1,3642,QNCHICKLHV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3644 18.022 0.48 119110000.0 25 0 18998000.0 + 17654 KPTGARPSAL 10 61 499.2930196942723 996.5714864553446 2 499.2935058474541 MULTI CID FTMS 0 0 0 3643 131072688.0 1.0 0 0.0 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 18.373094154950223 0.5392593366289069 1 KPTG 4 6 45.433 0.0 0.0 4.5589 0.0 0.0 0.0 610.3332003229124 610.3332003229124 35.34440644703906 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPTG 4.5589 + + 27 + 1 2.219 51906.3 1.0 690 2952 3643 DOHH2_400M_050219_1,3644 DOHH2_400M_050219_1,3644,KPTGARPSAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3645 18.032 554.0 199960.0 25 0 32222.0 + 21435 LPHFPVAP 8 137 439.2483728380357 876.4821927428715 2 439.2480651736259 MULTI CID FTMS 0 0 0 3643 148278.0625 0.1120439782894953 12 -0.1637401580810547 2 Unmodified _LPHFPVAP_ ENST00000451813.6_2_20:33590304-33590487:-|nuORF 17.086550045450526 0.6584923310065985 1 [PA]A[HK]VSAP 9 5 [PA]A[HK]V + + 31.682 -18.035 -2.9891 3.6147 3.6147 51.997 0.0 0.0 0.0 0.0 8.64970648723208 0.0 0.0 0 1.0 0.0 0.0 0.0 [PA]A[HK]VSAP 3.6147 - 211 + 1 2.219 94816.4 1.0 691 2952 3643 DOHH2_400M_050219_1,3645 DOHH2_400M_050219_1,3645,LPHFPVAP False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3647 18.036 77.0 699220.0 25 0 88209.0 + 16498 KALQERDY 8 82 511.766915629946 1021.519278326692 2 511.7661010622978 MULTI CID FTMS 0 0 0 3646 713048.25 0.6434018495649154 -2 0.08892822265625 1 Unmodified _KALQERDY_ CON__Q0V8M9;ENSG00000162267|ENST00000449956|ITIH3;ENST00000475931.1_1_3:52836712-52838129:+|nuORF;nc|ENSG00000162267|Q06033-2|ITIH3 14.838274106304384 0.6917062315640577 1 KAYE 4 5 36.063 0.0 0.0 3.5303 0.0 0.0 0.0 527.2604464166624 527.2604464166624 30.489386314483284 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 KAYE 3.5303 - 31 + 1 2.219 46195.4 1.0 692 2953 3646 DOHH2_400M_050219_1,3647 DOHH2_400M_050219_1,3647,KALQERDY False True False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 3648 18.039 148.0 396020.0 25 0 54862.0 + -1 SSDMECFPF 9 80 568.2047283936387 1134.3949038540773 2 568.2050048708916 MULTI CID FTMS 0 0 0 3646 446563.8125 0.8571834581954236 -3 0.13043212890625 2 Carbamidomethyl (C),Oxidation (M) _SSDM(Oxidation (M))EC(Carbamidomethyl (C))FPF_ REV__ENST00000263257.5_1_19:46437619-46437739:-|nuORF 7.910154910731844 0.6385446671287552 1 VY 2 -1 17.078 0.0 0.0 1.5055 0.0 0.0 854.2519117659898 0.0 854.2519117659898 0.0 3.5834938564822494 0.0 0.0 0 0.0 0.0 0.0 0.0 VY 1.5055 - 32 + 1 2.219 47025.4 1.0 693 2953 3646 DOHH2_400M_050219_1,3648 DOHH2_400M_050219_1,3648,SSDMECFPF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3649 18.043 217.0 262470.0 25 0 39761.0 + 17467 KPEPLLMI 8 75 470.78252380655545 939.5504946799108 2 470.7825805544853 MULTI CID FTMS 0 0 0 3646 344603.1875 1.0 0 0.0 3 Unmodified _KPEPLLMI_ REV__ENSG00000178163|ENST00000326756|ZNF518B 7.289230182591677 0.7800870086367542 1 KPT 3 -1 35.445 0.0 0.0 3.7726 0.0 0.0 0.0 610.3335054986936 610.3335054986936 25.356668758921828 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 KPT 3.7726 - 35 + 1 2.219 50488.3 1.0 694 2953 3646 DOHH2_400M_050219_1,3649 DOHH2_400M_050219_1,3649,KPEPLLMI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3650 18.057 800.0 121930.0 25 0 20242.0 -1 0 53 884.4139612044519 1766.8133694757037 2 884.9153930544853 MULTI CID FTMS 0 0 0 3646 124499.515625 0.8866412312699371 -1 0.0139484405517578 4 1 W 1 -1 14.604 0.0 0.0 0.82658 0.0 0.0 1562.7224098583192 0.0 1562.7224098583192 0.0 0.2237030067185941 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.82658 - 28 + 1 2.219 71702.2 0.6800000071525574 695 2953 3646 DOHH2_400M_050219_1,3650 DOHH2_400M_050219_1,3650, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3651 18.06 171.0 274080.0 25 0 44267.0 + 17551 KPPEVDKQ 8 64 470.75885676874935 0 470.7586242556572 PEAK CID FTMS 0 0 0 3646 110101.8203125 1.0 0 0.0 5 Unmodified _KPPEVDKQ_ REV__ENSG00000138785|ENST00000340139|INTS12 4.75600775471527 0.5825752635465162 1 PT 2 -1 10.969 0.0 0.0 1.1675 0.0 0.0 128.0461960764614 610.3359469049436 738.382142981405 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PT 1.1675 - 6 + 1 2.219 41336.7 1.0 696 2953 3646 DOHH2_400M_050219_1,3651 DOHH2_400M_050219_1,3651,KPPEVDKQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3652 18.074 800.0 176920.0 25 0 31027.0 -1 TEVKTQMQH 9 106 559.2664993716758 1116.5184458101514 2 559.2673828005791 MULTI CID FTMS 0 0 0 3646 95239.703125 0.9095176781991632 1 -0.0423583984375 6 Oxidation (M) _TEVKTQM(Oxidation (M))QH_ ENSG00000174373|ENST00000680220|RALGAPA1;ENST00000443361.1_1_9:108285096-108287232:+|nuORF;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1 7.289230182591677 0.6602208344931196 1 W 1 -1 14.604 0.0 0.0 1.308 0.0 0.0 912.4279897328062 0.0 912.4279897328062 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.308 - 96 + 1 2.219 109237.0 0.6899999976158142 697 2953 3646 DOHH2_400M_050219_1,3652 DOHH2_400M_050219_1,3652,TEVKTQMQH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3654 18.09 800.0 194640.0 25 0 22003.0 + + -1 EEDDQAKDI 9 152 531.7848218021753 1061.5550906711503 2 531.7848998904228 MULTI CID FTMS 0 0 0 3653 134646.046875 0.3156009280205422 4 -0.0819950103759765 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ ENSG00000127337|ENST00000247843|YEATS4 36.12702656103203 0.0967173616627612 1 KTTHRKD{I|L} 8 -1 57.244 0.0 0.0 5.3925 0.0 0.0 63.99872482608436 0.0 63.99872482608436 0.0 33.58018608268889 0.0 0.0 0 1.305462187404089 0.0 1.3494850021680094 0.3252574989159953 KTTHRKD{I|L} 5.3925 - 2237 + 1 2.219 120468.1 0.9900000095367432 698 2954 3653 DOHH2_400M_050219_1,3654 DOHH2_400M_050219_1,3654,LTGWPLTMK False False EEDDQAKDI 18.089754 531.784899890423 556305.5 3653.0 ENSG00000127337|ENST00000247843|YEATS4 2.9435455401738486 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3655 18.104 800.0 127270.0 25 0 14733.0 + 18073 KTDYDTREY 9 115 595.7692204680268 1189.5238880028537 2 595.7692138552666 MULTI CID FTMS 0 0 0 3653 182493.578125 1.0 0 0.0 2 Unmodified _KTDYDTREY_ ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6 51.487983226225225 0.0371074584807926 1 KTDYDT{[RE]|[WV]}Y 9 0 + 66.921 0.0 0.0 5.6259 5.6259 79.213 0.0 0.0 0.0 16.478174818886373 2.703037561203842 2.703037561203842 2.703037561203842 0 1.885151878060192 0.0 0.4247425010840047 0.0 + + KTDYDT{[RE]|[WV]}Y;KTDYDY{[TV]|[{I|L}S]}W;KTDYDT[YV]W;KTDYSE{[RE]|[WV]}Y;KTDYSE[YV]W;KY{[ES]|[DT]|[{I|L}C]}DT{[RE]|[WV]}Y;KY{[ES]|[DT]|[{I|L}C]}DY{[TV]|[{I|L}S]}W;KY{[ES]|[DT]|[{I|L}C]}DT[YV]W;KY{[ES]|[DT]|[{I|L}C]}SE{[RE]|[WV]}Y;KY{[ES]|[DT]|[{I|L}C]}SE[YV]W 5.6259;5.3987;5.3321;5.1615;4.8677;3.3725;3.1452;3.0787;2.9081;2.6143 +;-;-;-;-;-;-;-;-;- + 493 + 1 2.219 75943.3 0.8799999952316284 699 2954 3653 DOHH2_400M_050219_1,3655 DOHH2_400M_050219_1,3655,KTDYDTREY True True KTDYDTREY 18.103585 595.769213855267 712755.0 3653.0 nc|ENSG00000122257|Q7Z6E9-2|RBBP6;;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;;ENSG00000122257|ENST00000319715|RBBP6 8.45472796758016 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3656 18.117 800.0 198000.0 25 0 14365.0 + + -1 REVDPDGRRTL 11 154 438.5686476684559 1312.6841136055675 3 438.5688659548759 MULTI CID FTMS 0 0 0 3653 91597.34375 1.0 0 0.0 3 Oxidation (M) _LLVAM(Oxidation (M))FALAWY_ nc|ENSG00000087470|O00429-5|DNM1L;nc|ENSG00000087470|O00429-6|DNM1L;nc|ENSG00000087470|O00429-9|DNM1L;nc|ENSG00000087470|O00429-4|DNM1L;ENSG00000087470|ENST00000549701|DNM1L;nc|ENSG00000087470|O00429-3|DNM1L;nc|ENSG00000087470|O00429-8|DNM1L;nc|ENSG00000087470|O00429-2|DNM1L;ENST00000547548.1_1_12:32866256-32875568:+|nuORF 12.174745833636583 0.7818979005474666 1 {I|L}SW[RV]GP 7 -1 24.97 0.0 0.0 1.9022 0.0 0.0 499.2362606049698 0.0 499.2362606049698 0.0 12.980078589124188 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.3807196863200844 {I|L}SW[RV]GP 1.9022 - 493 + 1 2.219 123789.6 0.5899999737739563 700 2954 3653 DOHH2_400M_050219_1,3656 DOHH2_400M_050219_1,3656,LLVAMFALAWY False False REVDPDGRRTL 18.117399 438.568865954876 423092.75 3653.0 nc|ENSG00000087470|O00429-5|DNM1L;;nc|ENSG00000087470|O00429-6|DNM1L;;nc|ENSG00000087470|O00429-9|DNM1L;;nc|ENSG00000087470|O00429-4|DNM1L;;ENSG00000087470|ENST00000549701|DNM1L;;nc|ENSG00000087470|O00429-3|DNM1L;;nc|ENSG00000087470|O00429-8|DNM1L;;nc|ENSG00000087470|O00429-2|DNM1L;;ENST00000547548.1_1_12:32866256-32875568:+|nuORF 1.8144366318980851 3.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3658 18.122 19.0 3931500.0 25 0 585920.0 17508 KPHAFAVP 8 83 433.74588396686295 865.4772150005259 2 433.7458068728447 MULTI CID FTMS 0 0 0 3657 3177376.25 0.4866856983120424 4 -0.0442848205566406 1 Unmodified _KPHAFAVP_ ENSG00000181827|ENST00000559447|RFX7;nc|ENSG00000181827|Q2KHR2-1|RFX7;nc|ENSG00000181827|Q2KHR2-2|RFX7 20.871210003555333 0.6025813472596342 1 [VG]PT 4 7 31.682 0.0 0.0 3.6607 0.0 0.0 0.0 508.2634371393188 508.2634371393188 -4.1072813928388285 0.0 -4.1072813928388285 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VG]PT 3.6607 - 267 + 1 2.198 62654.9 1.0 701 2955 3657 DOHH2_400M_050219_1,3658 DOHH2_400M_050219_1,3658,KPHAFAVP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3659 18.136 800.0 83174.0 25 0 5281.9 -1 0 55 628.7848714566691 2511.110379960276 4 629.0349609255791 MULTI CID FTMS 0 0 0 3657 106281.140625 0.3940440887243142 3 -0.0383796691894531 2 1 D 1 -1 16.237 0.0 0.0 0.64661 0.0 0.0 859.3557891065817 1533.7050906613804 2393.060879767962 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 D 0.64661 - 17 + 1 2.198 56007.2 0.7400000095367432 702 2955 3657 DOHH2_400M_050219_1,3659 DOHH2_400M_050219_1,3659, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3662 18.156 800.0 84693.0 25 0 4358.0 -1 0 87 682.9843542379082 2045.9312333139244 3 682.9841796755791 MULTI CID FTMS 0 0 0 3661 106449.84375 0.6779594394009173 -2 0.0222148895263671 1 1 {[CP]|[EA]}{[QG]|[NA]}{M(Oxidation (M))|F}G{NN|[MP]|[D{I|L}]|[EV]}HH 10 -1 34.683 0.0 0.0 1.6952 0.0 0.0 0.0 951.4209501865683 951.4209501865683 18.90326676044277 0.0 0.0 0.0 0 1.5501648626366045 0.0 0.0 0.0 {[CP]|[EA]}{[QG]|[NA]}{M(Oxidation (M))|F}G{NN|[MP]|[D{I|L}]|[EV]}HH 1.6952 - 440 + 1 2.198 60048.0 0.699999988079071 703 2957 3661 DOHH2_400M_050219_1,3662 DOHH2_400M_050219_1,3662, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3664 18.161 184.0 361640.0 25 0 45897.0 + -1 IQRLETMK 8 77 517.7868086266992 1033.5590643201983 2 517.7863647341728 MULTI CID FTMS 0 0 0 3663 193644.3125 0.1513898232404471 16 -0.2267169952392578 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 1 KTT[{I|L}P][WP]K 8 -1 43.536 0.0 0.0 4.2122 0.0 0.0 63.9967217356736 0.0 63.9967217356736 0.0 32.5667531214534 0.0 0.0 0 1.805462187404089 0.0 0.8252574989159953 0.2614393726401688 KTT[{I|L}P][WP]K 4.2122 - 105 + 1 2.198 56496.7 1.0 704 2958 3663 DOHH2_400M_050219_1,3664 DOHH2_400M_050219_1,3664,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3674 18.209 800.0 251890.0 25 0 110080.0 + -1 TENGYAHNV 9 135 502.2827602848799 501.2754838182799 1 502.2825805544853 MULTI CID FTMS 0 0 0 3673 168935.234375 0.7610746219318856 11 -0.2868671417236328 1 ENSG00000080986|ENST00000261597|NDC80 1 W 1 -1 13.099 0.0 0.0 2.6131 0.0 0.0 297.1847378239424 0.0 297.1847378239424 0.0 4.276586025979711 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.6131 - 52 + 1 2.19 155945.8 0.7699999809265137 705 2967 3673 DOHH2_400M_050219_1,3674 DOHH2_400M_050219_1,3674, False False TENGYAHNV 18.209193 502.282580554485 1839702.625 3673.0 ENSG00000080986|ENST00000261597|NDC80 4.68734868367513 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3676 18.215 171.0 344200.0 25 0 37324.0 + 6305 DVHKKYNAL 9 101 363.2016566153089 1086.583140446127 3 363.2013732790947 MULTI CID FTMS 0 0 0 3675 373853.53125 0.2950955237920739 14 -0.3309497833251953 1 Unmodified _DVHKKYNAL_ ENSG00000055130|ENST00000325222|CUL1 15.847184025352805 0.4077185912009129 1 WH[Q{I|L}]V[{M(Oxidation (M))|F}V] 7 8 16.203 0.0 0.0 1.4911 0.0 0.0 159.08973123574202 0.0 159.08973123574202 0.0 -2.9394551756687584 -2.9394551756687584 0.0 0 0.0 0.0 0.0 0.9247425010840048 WH[Q{I|L}]V[{M(Oxidation (M))|F}V] 1.4911 - 174 + 1 2.19 53231.8 1.0 706 2968 3675 DOHH2_400M_050219_1,3676 DOHH2_400M_050219_1,3676,DVHKKYNAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3677 18.223 469.0 115940.0 25 0 10291.0 + 35498 STMSTNGIPR 10 84 540.2607538020011 1078.506954670802 2 540.2619506716728 MULTI CID FTMS 0 0 0 3675 136311.640625 0.0157388602949623 36 -0.7680339813232422 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 49.55428908609986 0.0827668555218455 1 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 10 2 + 58.677 0.0 0.0 5.4406 5.4406 77.372 0.0 0.0 0.0 7.269987279362624 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.4247425010840047 0.0 0.805462187404089 0.6989700043360187 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[NV]|[RG]}{I|L}P;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[NV]|[RG]}{I|L}P;[DP][KS]KTS[WM];{[MG]|[TS]}{M(Oxidation (M))|F}S[{I|L}A]{[MS]|[{M(Oxidation (M))|F}A]}[HV];{[MG]|[TS]}[HD]V{[RE]|[WV]}[HV];[AG]{[RE]|[WV]}[KP]ST{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 5.4406;5.2773;4.5909;4.5583;4.4276;3.7086;1.6022;1.3154;0.87411;0.26977 -;+;-;-;-;-;-;-;-;- + 221 + 1 2.19 47785.7 1.0 707 2968 3675 DOHH2_400M_050219_1,3677 DOHH2_400M_050219_1,3677,STMSTNGIPR True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3678 18.237 800.0 86386.0 25 0 8658.4 + 4829 DFFNDSYYY 9 107 617.2417405654897 1232.4689281977794 2 617.2415649294853 MULTI CID FTMS 0 0 0 3675 106712.9609375 0.8063384592716184 -2 0.0204315185546875 3 Unmodified _DFFNDSYYY_ REV__ENSG00000151748|ENST00000324679|SAV1 10.823927491677226 0.5436922275383211 1 GHDSGGGY 8 -1 28.013 0.0 0.0 2.2729 0.0 0.0 484.18683698859815 0.0 484.18683698859815 0.0 16.0235909396512 0.0 0.0 0 0.3935078169319297 0.0 0.0 0.0 GHDSGGGY 2.2729 - 3802 + 1 2.19 54787.5 0.4900000095367431 708 2968 3675 DOHH2_400M_050219_1,3678 DOHH2_400M_050219_1,3678,DFFNDSYYY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3680 18.254 800.0 94735.0 25 0 8467.8 + 6307 DVHKKYNAL 9 114 544.2979421738404 1086.5813314144807 2 544.2977783083916 MULTI CID FTMS 0 0 0 3679 99547.8046875 0.2350121142061891 14 -0.3077526092529297 1 Unmodified _DVHKKYNAL_ ENSG00000055130|ENST00000325222|CUL1 49.93300154707207 0.0405168250806675 1 DVHK 4 5 65.79 0.0 0.0 6.0547 0.0 0.0 0.0 604.3092745416624 604.3092745416624 53.31546893236258 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.7302046884880937 + DVHK 6.0547 + + 218 + 1 2.19 60587.1 0.550000011920929 709 2969 3679 DOHH2_400M_050219_1,3680 DOHH2_400M_050219_1,3680,DVHKKYNAL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3681 18.265 657.0 201770.0 25 0 14058.0 + 37609 TLKSKQDEL 9 139 531.2957016815383 1060.5768504298765 2 531.2970458865166 MULTI CID FTMS 0 0 0 3679 101055.0546875 0.5555515135470326 -3 0.0484504699707031 2 Unmodified _TLKSKQDEL_ ENSG00000068724|ENST00000319190|TTC7A;ENST00000409825.5_1_2:47184044-47301059:+|nuORF;ENST00000491786.5_1_2:47205894-47301059:+|nuORF;nc|ENSG00000068724|Q9ULT0-4|TTC7A 32.037481411007896 0.1235546156350648 1 [{I|L}T]WWE{I|L}T{I|L} 8 6 + 60.448 0.0 0.0 5.6995 5.6995 84.558 0.0 0.0 0.0 21.220230592096243 7.691752320513302 7.691752320513302 7.691752320513302 0 0.5 2.0 0.7134679910804405 0.0 [{I|L}T]WWE{I|L}T{I|L};[{I|L}T][C(Carbamidomethyl (C))R]TSKVP;[{I|L}T][C(Carbamidomethyl (C))R]{[QG]|[NA]}{I|L}T{I|L};[{I|L}T][C(Carbamidomethyl (C))R]T[QA]V{I|L};[{I|L}T][C(Carbamidomethyl (C))R]TN[{I|L}A]{I|L};[{I|L}T]KSC{M(Oxidation (M))|F}[H{I|L}]{I|L};[{I|L}T]K[NG]{[DS]|[MA]|[CV]|TT}{I|L}T{I|L};[{I|L}T][C(Carbamidomethyl (C))R][DG]KV{I|L};[{I|L}T]KWC[QA]V{I|L};[{I|L}T]KWCN[{I|L}A]{I|L} 5.6995;4.9743;4.9706;4.6501;4.5323;4.4698;4.4042;4.3915;4.3733;4.2555 -;-;-;-;-;-;-;-;-;- 3156 1 2.19 106104.4 1.0 710 2969 3679 DOHH2_400M_050219_1,3681 DOHH2_400M_050219_1,3681,TLKSKQDEL True True TLKSKQDEL 18.26509 531.297045886517 852936.5625 3679.0 ENSG00000068724|ENST00000319190|TTC7A;;ENST00000409825.5_1_2:47184044-47301059:+|nuORF;;ENST00000491786.5_1_2:47205894-47301059:+|nuORF;;nc|ENSG00000068724|Q9ULT0-4|TTC7A 3.0188399950663247 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3682 18.279 781.0 75716.0 25 0 2552.9 -1 0 87 721.3267440798103 2160.9584028396307 3 721.3274413943291 MULTI CID FTMS 0 0 0 3679 72731.359375 0.6708712074207918 -2 0.0444316864013671 3 1 {[QG]|[NA]}AE{M(Oxidation (M))|F}G[HD]{I|L}HHTAGQAH[WY] 19 -1 {[QG]|[NA]}AE + + 69.319 10.177 2.6423 3.2078 3.2078 50.951 0.0 0.0 0.0 0.0 59.14197490877392 0.0 0.0 0 1.798455006504028 0.0 0.0 0.3252574989159953 {[QG]|[NA]}AE{M(Oxidation (M))|F}G[HD]{I|L}HHTAGQAH[WY] 3.2078 - 1897 + 1 2.19 47717.1 1.0 711 2969 3679 DOHH2_400M_050219_1,3682 DOHH2_400M_050219_1,3682, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3684 18.283 5.8 8572100.0 25 0 1277000.0 + 17582 KPTAAFHLL 9 56 499.2930196942723 996.5714864553446 2 499.2934448122978 MULTI CID FTMS 0 0 0 3683 9479450.0 0.0723220843689419 18 -0.3515625 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 1 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3528040238085 667.3528040238085 27.01667520279372 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 21 + 1 2.19 44564.9 1.0 712 2970 3683 DOHH2_400M_050219_1,3684 DOHH2_400M_050219_1,3684,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3685 18.298 800.0 82548.0 25 0 2627.5 + 35229 SSDRHLTQY 9 101 553.7647434857321 1105.514934038264 2 553.7645141482353 MULTI CID FTMS 0 0 0 3683 96655.1953125 1.0 0 0.0 2 Unmodified _SSDRHLTQY_ ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1 45.739877483867886 0.0497104363764649 1 [QT]{[ES]|[DT]|[{I|L}C]}H{I|L}TQY 9 3 + 64.161 0.0 0.0 5.8037 5.8037 80.926 0.0 0.0 0.0 3.252574989159953 16.478174818886373 3.252574989159953 3.252574989159953 0 1.048455006504028 0.0 1.25 0.2302046884880938 [QT]{[ES]|[DT]|[{I|L}C]}H{I|L}TQY;[YQ][PG]H{I|L}TQY;[NP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{I|L}TQY;[QT]{[ES]|[DT]|[{I|L}C]}H{I|L}T[AG]Y;[YQ][YQ]{I|L}TQY;[{M(Oxidation (M))|F}V][QA]H{I|L}TQY;[YQ][PG]H{I|L}T[AG]Y;[NP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{I|L}T[AG]Y;[YQ][YQ]{I|L}T[AG]Y;[QT]{[ES]|[DT]|[{I|L}C]}H{I|L}G[TA]Y 5.8037;5.5095;5.1384;4.9707;4.9235;4.745;4.6765;4.3054;4.0857;4.0431 -;-;-;-;-;-;-;-;-;- 857 1 2.19 53709.0 0.4900000095367431 713 2970 3683 DOHH2_400M_050219_1,3685 DOHH2_400M_050219_1,3685,SSDRHLTQY True True SSDRHLTQY 18.297623 553.764514148235 419485.78125 3683.0 ENSG00000153922|ENST00000614616|CHD1;;nc|ENSG00000153922|O14646-2|CHD1 7.568874359130859 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3686 18.307 518.0 212180.0 25 0 44446.0 + 28072 PPHPPPPPP 9 108 466.75381694954825 931.4930809658964 2 467.2596618533134 MULTI CID FTMS 0 0 0 3683 168534.171875 0.946492759315522 -10 0.1135635375976562 3 Unmodified _PPHPPPPPP_ nc|ENSG00000066855|Q15390-2|MTFR1;nc|ENSG00000048991|Q15032|R3HDM1;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000175879|ENST00000313173|HOXD8;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000175879|P13378-2|HOXD8;nc|ENSG00000048991|Q15032-2|R3HDM1;ENSG00000066855|ENST00000262146|MTFR1;ENSG00000163064|ENST00000295206|EN1 28.17323086031832 0.1727213568982648 1 PPKY 4 7 21.484 0.0 0.0 2.3065 0.0 0.0 428.21739883001055 0.0 428.21739883001055 0.0 9.010234424404686 0.0 0.0 0 0.7672203223519531 0.0 0.0 0.0 PPKY 2.3065 - 90 1 2.19 86422.6 1.0 714 2970 3683 DOHH2_400M_050219_1,3686 DOHH2_400M_050219_1,3686,PPHPPPPPP False False PPHPPPPPP 18.306732 467.259661853313 2622196.5 3683.0 nc|ENSG00000066855|Q15390-2|MTFR1;;nc|ENSG00000048991|Q15032|R3HDM1;;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;;ENSG00000048991|ENST00000683871|R3HDM1;;ENSG00000175879|ENST00000313173|HOXD8;;nc|ENSG00000048991|Q15032-3|R3HDM1;;nc|ENSG00000048991|Q15032-4|R3HDM1;;nc|ENSG00000175879|P13378-2|HOXD8;;nc|ENSG00000048991|Q15032-2|R3HDM1;;ENSG00000066855|ENST00000262146|MTFR1;;ENSG00000163064|ENST00000295206|EN1 -0.2452642718950907 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3688 18.313 174.0 311640.0 25 0 22511.0 + 9406 FKDKNNEK 8 90 511.766915629946 1021.519278326692 2 511.7671386599541 MULTI CID FTMS 0 0 0 3687 170261.265625 0.1536311367602239 16 -0.3193321228027344 1 Unmodified _FKDKNNEK_ REV__ENSG00000120068|ENST00000239144|HOXB8;REV__ENSG00000175879|ENST00000313173|HOXD8;REV__nc|ENSG00000175879|P13378-2|HOXD8 14.838274106304384 0.6917062315640577 1 KAY[NG]AAAEK 10 -1 + 46.084 0.0 0.0 4.5114 4.5114 87.16 0.0 0.0 0.0 12.402483267411045 14.21743437167494 12.402483267411045 31.97651567145905 0 0.805462187404089 0.0 0.3494850021680094 0.2887254899964357 KAY[NG]AAAEK;[KA]YEDAA[RV];[RP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HV]EK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WY]AA[RV] 4.5114;1.3811;1.1039;0.73435 -;-;-;- 258 + 1 2.19 45547.9 1.0 715 2971 3687 DOHH2_400M_050219_1,3688 DOHH2_400M_050219_1,3688,FKDKNNEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3689 18.321 496.0 163450.0 25 0 9797.4 + 6841 EEDGHTHQW 9 114 569.7309841260201 1137.44741531884 2 569.7311279177666 MULTI CID FTMS 0 0 0 3687 150912.890625 0.7084441833189201 -4 0.1139430999755859 2 Unmodified _EEDGHTHQW_ ENSG00000127337|ENST00000247843|YEATS4;ENST00000552949.1_1_12:69753653-69756720:+|nuORF 125.0377797344192 0.0019632425973841 1 EED{[HG]|PP}THQW 9 0 + 46.495 0.0 0.0 4.0877 4.0877 77.59 0.0 0.0 0.0 12.145840120952307 6.250160338053448 6.250160338053448 6.250160338053448 0 1.6375918373824812 1.5228787452803376 0.0 1.4802046884880935 + + EED{[HG]|PP}THQW;EED{[HG]|PP}THWQ;{[CT]|[{M(Oxidation (M))|F}G]}QHDYGEW;{[CT]|[{M(Oxidation (M))|F}G]}QHDYDAW;{[CT]|[{M(Oxidation (M))|F}G]}EGYDHWQ;{[CT]|[{M(Oxidation (M))|F}G]}ADYDHWQ;{[ET]|[MV]}[WH]DHGA{[DA]|[EG]};{[CT]|[{M(Oxidation (M))|F}G]}AGHDAAETY;[WE][HT]DHGA{[DA]|[EG]};[HT][DN][HA]EEW 4.0877;3.5382;3.0199;2.6852;2.6581;2.3234;2.2623;2.1869;2.1632;2.1345 +;-;-;-;-;-;-;-;-;- + 772 + 1 2.19 62123.1 1.0 716 2971 3687 DOHH2_400M_050219_1,3689 DOHH2_400M_050219_1,3689,EEDGHTHQW True True EEDGHTHQW 18.321494 569.731127917767 1322365.75 3687.0 ENST00000552949.1_1_12:69753653-69756720:+|nuORF;;ENSG00000127337|ENST00000247843|YEATS4 7.962058385213216 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3690 18.327 319.0 214700.0 25 0 11435.0 -1 0 109 460.2388488225457 459.2315723559457 1 460.2387878298759 MULTI CID FTMS 0 0 0 3687 274623.3125 0.5448561739503084 -59 1.1290206909179688 3 1 W 1 -1 10.089 0.0 0.0 2.1969 0.0 0.0 255.1416045598504 0.0 255.1416045598504 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.1969 - 11 + 1 2.19 58824.6 1.0 717 2971 3687 DOHH2_400M_050219_1,3690 DOHH2_400M_050219_1,3690, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3692 18.337 373.0 168880.0 25 0 83009.0 -1 0 67 508.2940554401776 507.2867789735776 1 508.2942687869072 MULTI CID FTMS 0 0 0 3691 106122.84375 0.6326423245942092 19 -0.3343544006347656 1 1 Y 1 -1 11.259 0.0 0.0 2.2195 0.0 0.0 326.21324489330254 0.0 326.21324489330254 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.2195 - 7 + 1 2.19 54477.9 1.0 718 2972 3691 DOHH2_400M_050219_1,3692 DOHH2_400M_050219_1,3692, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3693 18.35 800.0 186710.0 25 0 47174.0 23503 LTKEEREIR 9 108 587.3329278894198 1172.6513028456395 2 587.3327514529228 MULTI CID FTMS 0 0 0 3691 101747.1484375 0.7578197153162077 -3 0.09002685546875 2 Unmodified _LTKEEREIR_ ENSG00000115524|ENST00000335508|SF3B1 21.53697664764585 0.2571576504437394 1 [{I|L}T]N{I|L}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KT 9 6 47.369 0.0 0.0 4.0395 0.0 0.0 0.0 127.07902108662292 127.07902108662292 16.170912423450403 0.0 0.0 0.0 0 0.0 2.0 0.6989700043360187 0.0 [{I|L}T]N{I|L}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KT 4.0395 - 393 1 2.19 115060.9 0.5099999904632568 719 2972 3691 DOHH2_400M_050219_1,3693 DOHH2_400M_050219_1,3693,LTKEEREIR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3694 18.364 800.0 90247.0 25 0 15013.0 + 31750 GGYGGGSSGGGGGGY 15 108 573.7260324573163 1145.4375119814324 2 573.7261230349541 MULTI CID FTMS 0 0 0 3691 90899.7578125 1.0 0 0.0 3 Unmodified _RSCCWQSGGY_ ENSG00000186395|ENST00000269576|KRT10;P13645 10.823927491677226 0.6659270209832991 1 [QA]NG[HD]GNGGGY 12 9 + 42.01 0.0 0.0 3.6676 3.6676 76.721 0.0 0.0 0.0 28.45351913065059 15.10666445614628 15.10666445614628 6.611814434466183 0 0.5 0.0 0.0 0.0 [QA]NG[HD]GNGGGY;[QA]NG[HD]GNGNY;[QA]NG[HD]GNNGY;[QA]GGG[HD]GNGGGY;[QA]NG[HD]GGGGGGY;[QA]NG[HD]GGGGNY;[QA]GGG[HD]GNGNY;[QA]NG[HD]GGGNGY;[QA]GGG[HD]GNNGY;[QA]NG{[DS]|[MA]|[CV]|TT}{[YD]|[{M(Oxidation (M))|F}M]}GGY 3.6676;3.0904;3.0704;2.8733;2.8733;2.2934;2.2934;2.2734;2.2734;2.0481 -;-;-;-;-;-;-;-;-;- 617 + 1 2.19 59910.3 0.4799999892711639 720 2972 3691 DOHH2_400M_050219_1,3694 DOHH2_400M_050219_1,3694,RSCCWQSGGY False False GGYGGGSSGGGGGGY 18.364192 573.726123034954 464446.125 3691.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 2.393447041511536 2.0 False 15.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3695 18.378 800.0 103930.0 25 0 5686.9 + 6863 EEEEKQKSTW 10 108 647.301469339302 1292.588385745404 2 647.3007079958916 MULTI CID FTMS 0 0 0 3691 92372.796875 0.7251344373294177 -3 0.09002685546875 4 Unmodified _EEEEKQKSTW_ ENSG00000115761|ENST00000381685|NOL10;nc|ENSG00000115761|Q9BSC4-2|NOL10;nc|ENSG00000115761|Q9BSC4-4|NOL10 108.26204199777034 0.0037791241451545 1 EEEEKQKSTW 10 0 + 89.793 0.0 0.0 6.9467 6.9467 90.08 0.0 0.0 0.0 48.8282194246704 16.53212513775344 16.53212513775344 9.164539485499262 0 2.072682509756042 1.3979400086720375 0.5 0.2742275032520141 + + EEEEKQKSTW;EEEEK[AG]KSTW;EEEEKQKQ[{M(Oxidation (M))|F}V];E{M(Oxidation (M))|F}[HC]KQKSTW;EEEEK[AG]KQ[{M(Oxidation (M))|F}V];{[CT]|[{M(Oxidation (M))|F}G]}TSKQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ST{[CT]|[{M(Oxidation (M))|F}G]};[YT][KQ]Q[HD]STW;EE[HC][KQ]KST{[CT]|[{M(Oxidation (M))|F}G]};{[CT]|[{M(Oxidation (M))|F}G]}T[WH][SG]KSTW;{[CT]|[{M(Oxidation (M))|F}G]}T[KS]Q[HD]STW 6.9467;6.2377;4.5532;4.2637;3.8442;2.807;2.7739;2.7429;2.5284;2.3537 +;-;-;-;-;-;-;-;-;- + 496 + 1 2.19 62592.6 0.4600000083446502 721 2972 3691 DOHH2_400M_050219_1,3695 DOHH2_400M_050219_1,3695,EEEEKQKSTW True True EEEEKQKSTW 18.378029 647.300707995892 776206.4375 3691.0 nc|ENSG00000115761|Q9BSC4-2|NOL10;;nc|ENSG00000115761|Q9BSC4-4|NOL10;;ENSG00000115761|ENST00000381685|NOL10 7.9533688227335615 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3698 18.388 167.0 338410.0 25 0 34673.0 7592 EIMAQCEEW 9 83 380.15595408314505 1137.4460328496352 3 380.1559936404228 MULTI CID FTMS 0 0 0 3697 248942.390625 0.9727704718308132 1 -0.0217475891113281 1 Unmodified _EIMAQCEEW_ ENSG00000115760|ENST00000421745|BIRC6 4.897010918128616 0.7437319958283661 1 W 1 8 13.979 0.0 0.0 1.229 0.0 0.0 933.3558972068604 0.0 933.3558972068604 0.0 -12.21848749616356 -12.21848749616356 0.0 0 0.0 0.0 0.0 0.0 + W 1.229 + + 60 + 1 2.219 49765.1 1.0 722 2974 3697 DOHH2_400M_050219_1,3698 DOHH2_400M_050219_1,3698,EIMAQCEEW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3699 18.396 466.0 243380.0 25 0 25434.0 17716 KPVGFTVHAI 10 90 534.8114447735323 1067.6083366138646 2 534.8115722537041 MULTI CID FTMS 0 0 0 3697 203918.25 0.3901152000682975 -10 0.2012786865234375 2 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 30.63653989081413 0.2803493085145199 1 KPT 3 7 42.747 0.0 0.0 4.004 0.0 0.0 0.0 738.3899248956968 738.3899248956968 3.018603981677927 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7302046884880937 0.0 KPT 4.004 - 170 + 1 2.219 92100.7 1.0 723 2974 3697 DOHH2_400M_050219_1,3699 DOHH2_400M_050219_1,3699,KPVGFTVHAI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3700 18.404 430.0 148400.0 25 0 12450.0 + 13221 HGTIKNQL 8 118 455.7590750208028 909.5035971084056 2 455.7590515017509 MULTI CID FTMS 0 0 0 3697 141891.8125 0.9125281601662936 -4 0.1034870147705078 3 Unmodified _HGTIKNQL_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 42.09456458481378 0.1992492688217789 1 {[HG]|PP}T{I|L}K 5 3 23.233 0.0 0.0 2.5544 0.0 0.0 0.0 370.1724563215493 370.1724563215493 2.3555591546705728 0.0 0.0 0.0 0 0.5283773187068795 0.0 0.2887254899964357 0.0 + {[HG]|PP}T{I|L}K 2.5544 + + 235 1 2.219 52536.4 1.0 724 2974 3697 DOHH2_400M_050219_1,3700 DOHH2_400M_050219_1,3700,HGTIKNQL False True HGTIKNQL 18.403825 455.759051501751 859153.8125 3697.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF 4.9115095138549805 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3702 18.411 227.0 285790.0 25 0 82924.0 -1 HLHWRMRRHM 10 73 492.5820954525569 1474.7244569578709 3 492.5820190310478 MULTI CID FTMS 0 0 0 3701 69934.953125 0.5710030737184032 1 -0.0499744415283203 1 Oxidation (M) _HLHWRMRRHM(Oxidation (M))_ ENST00000511465.1_1_4:185263030-185268908:-|nuORF 1.9063754702782607 0.7178183895776981 1 GS 2 -1 13.443 0.0 0.0 0.91158 0.0 0.0 842.4004548104446 485.2481459943273 1327.6486008047718 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 GS 0.91158 - 61 + 1 2.219 56443.8 1.0 725 2975 3701 DOHH2_400M_050219_1,3702 DOHH2_400M_050219_1,3702,HLHWRMRRHM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3703 18.421 580.0 178140.0 25 0 28992.0 + 15778 ISEDKNPDY 9 115 540.7446626695124 1079.4747724058248 2 540.7453491091728 MULTI CID FTMS 0 0 0 3701 181000.703125 0.6346626937579216 -5 0.1252346038818359 2 Unmodified _ISEDKNPDY_ ENSG00000173801|ENST00000393931|JUP 49.52724829834842 0.0414064571532091 1 {[TV]|[{I|L}S]}GDNS{I|L}[DP]Y 10 4 + 77.123 0.0 0.0 7.1445 7.1445 82.985 0.0 0.0 0.0 2.058502487106793 2.058502487106793 2.058502487106793 2.058502487106793 0 1.6237125054200234 2.0 1.513632853717045 0.5114393726401688 {[TV]|[{I|L}S]}GDNS{I|L}[DP]Y;{I|L}SEDKNPDY;{[TV]|[{I|L}S]}GDSN{I|L}[DP]Y;{I|L}SE[YT]ENQP;{I|L}SEDKGGPDY;{[TV]|[{I|L}S]}GDNS[DP]{I|L}Y;{I|L}SE[YT]NEQP;{I|L}SWWNPDY;{[QD]|[EN]|[WG]|[KD]|[RS]}NES{I|L}[DP]Y;{I|L}SE{[HG]|PP}YPDY 7.1445;6.9538;6.5354;6.177;6.1007;6.0497;5.9116;5.7795;5.7696;5.7321 -;+;-;-;-;-;-;-;-;- + 4105 1 2.219 81209.7 1.0 726 2975 3701 DOHH2_400M_050219_1,3703 DOHH2_400M_050219_1,3703,ISEDKNPDY True True ISEDKNPDY 18.420804 540.745349109173 1357195.125 3701.0 ENSG00000173801|ENST00000393931|JUP 5.028037389119466 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3704 18.427 316.0 253390.0 25 0 23565.0 + 35475 STMSTNGIPR 10 104 532.2642377057441 1062.513922478288 2 532.2664062380791 MULTI CID FTMS 0 0 0 3701 166260.0625 0.8259497070539908 -3 0.0765495300292968 3 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 41.95555342248728 0.1369168616057562 1 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 10 2 {[MG]|[TS]} + + 36.126 5.4576 2.9017 3.4 3.4 51.421 0.0 0.0 0.0 0.0 11.887593719468022 0.0 0.0 0 0.3807196863200844 0.0 0.8252574989159953 0.4247425010840047 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 3.4 - 445 + 1 2.219 66267.1 1.0 727 2975 3701 DOHH2_400M_050219_1,3704 DOHH2_400M_050219_1,3704,STMSTNGIPR False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3705 18.44 800.0 62508.0 25 0 7531.0 + -1 FWYNCWCYLPN 11 77 811.8324504579456 1621.650347982691 2 812.3339111208916 MULTI CID FTMS 0 0 0 3701 116495.1015625 0.3808929259651157 -5 0.1252346038818359 4 2 Carbamidomethyl (C) _FWYNC(Carbamidomethyl (C))WC(Carbamidomethyl (C))YLPN_ REV__ENST00000272542.7_1_2:113404910-113405027:+|nuORF 0.3070304955306653 0.8736993455979228 1 {[YD]|[{M(Oxidation (M))|F}M]}GSYVK 7 -1 48.223 0.0 0.0 2.9737 0.0 0.0 0.0 806.235283855991 806.235283855991 9.20387606540941 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.2059771852360797 0.0 {[YD]|[{M(Oxidation (M))|F}M]}GSYVK 2.9737 - 1143 1 2.219 40341.1 0.4799999892711639 728 2975 3701 DOHH2_400M_050219_1,3705 DOHH2_400M_050219_1,3705,FWYNCWCYLPN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3706 18.454 775.0 170170.0 25 0 6898.7 + 29047 QEIDEQRTKY 10 155 437.2173614411543 1308.630254923663 3 437.2173034548759 MULTI CID FTMS 0 0 0 3701 90607.21875 0.4444107068819773 -5 0.1252346038818359 5 Unmodified _QEIDEQRTKY_ ENSG00000140743|ENST00000268383|CDR2 23.015651743759182 0.4515786786615758 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DEQE 7 4 33.298 0.0 0.0 2.5445 0.0 0.0 0.0 434.2584627740844 434.2584627740844 12.813163910911207 0.0 0.0 0.0 0 0.0 0.0 0.5 0.3807196863200844 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DEQE 2.5445 - 762 + 1 2.219 110218.7 1.0 729 2975 3701 DOHH2_400M_050219_1,3706 DOHH2_400M_050219_1,3706,QEIDEQRTKY False True QEIDEQRTKY 18.453818 437.217303454876 841235.75 3701.0 ENSG00000140743|ENST00000268383|CDR2 6.002338250478108 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3708 18.46 127.0 500710.0 25 0 46570.0 + 34146 SLLYDSIVP 9 71 503.7745778937185 1005.534602854237 2 503.7745239138603 MULTI CID FTMS 0 0 0 3707 486892.28125 0.1195849144640541 -9 0.2609825134277344 1 Unmodified _SLLYDSIVP_ REV__ENSG00000197386|ENST00000355072|HTT 36.04419817259434 0.0971720506436186 1 VT{I|L}DTTQTK 9 -1 + 88.423 0.0 0.0 8.7937 8.7937 93.539 0.0 0.0 0.0 69.26786686717332 9.362915595803017 9.362915595803017 9.208187539523747 0 0.4247425010840047 2.0 0.8494850021680094 0.4247425010840047 VT{I|L}DTTQTK;VT{I|L}DTT[AG]TK;VT{I|L}[WM]QTK;VT{I|L}[WM][AG]TK;VT{I|L}DT[YV][VP];{[TV]|[{I|L}S]}{[SA]|[TG]}RRT{[ES]|[DT]|[{I|L}C]};[{I|L}T][SG]RRT{[ES]|[DT]|[{I|L}C]} 8.7937;7.8779;7.1828;6.2617;5.9247;2.5751;0.89536 -;-;-;-;-;-;- 262 + 1 2.219 54897.3 1.0 730 2976 3707 DOHH2_400M_050219_1,3708 DOHH2_400M_050219_1,3708,SLLYDSIVP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3709 18.469 486.0 166470.0 25 0 13703.0 -1 KFAMFITL 8 123 493.7728344890879 985.531116044976 2 493.7720519900322 MULTI CID FTMS 0 0 0 3707 153221.3125 0.2983052130260887 -7 0.2165508270263672 2 Oxidation (M) _KFAM(Oxidation (M))FITL_ ENSG00000170522|ENST00000302274|ELOVL6 9.347437153973935 0.7675937258251505 1 H{M(Oxidation (M))|F}NVGNT{I|L} 8 -1 27.406 0.0 0.0 2.7808 0.0 0.0 85.08982283759921 0.0 85.08982283759921 0.0 8.58857830256703 0.0 0.0 0 0.1822333069283654 0.0 0.0 0.0 H{M(Oxidation (M))|F}NVGNT{I|L} 2.7808 - 544 1 2.219 66085.5 1.0 731 2976 3707 DOHH2_400M_050219_1,3709 DOHH2_400M_050219_1,3709,KFAMFITL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3710 18.47 56.0 877900.0 25 0 118340.0 + -1 IQRLETMK 8 66 517.7870041147899 1033.5594552963796 2 517.7872802615166 MULTI CID FTMS 0 0 0 3707 862538.5625 1.0 0 0.0 3 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 1 T{M(Oxidation (M))|F}K 3 -1 41.995 0.0 0.0 4.0631 0.0 0.0 639.3701377224678 0.0 639.3701377224678 0.0 27.21848749616356 0.0 0.0 0 1.1549471895720984 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 4.0631 + + 51 1 2.219 41749.0 1.0 732 2976 3707 DOHH2_400M_050219_1,3710 DOHH2_400M_050219_1,3710,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3711 18.475 225.0 268380.0 25 0 42823.0 + 35355 STDKQMGY 8 90 465.2061252308418 928.3976975284836 2 465.2067138552666 MULTI CID FTMS 0 0 0 3707 275660.0625 1.0 0 0.0 4 Unmodified _STDKQMGY_ ENSG00000084623|ENST00000677711|EIF3I 34.10243960390752 0.3329570729325616 1 {[MG]|[TS]}[Y{I|L}][EP]GY 8 4 + 30.295 0.0 0.0 3.2632 3.2632 74.395 0.0 0.0 0.0 9.232712163289278 5.280287236002437 5.280287236002437 5.280287236002437 0 0.7742275032520141 0.0 0.2887254899964357 0.0 {[MG]|[TS]}[Y{I|L}][EP]GY;{[MG]|[TS]}[HT]MQQP;{[MG]|[TS]}[HT]M[AG]QP;{[MG]|[TS]}[HT]MQ[AG]P;{[MG]|[TS]}[{M(Oxidation (M))|F}E]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W;{[MG]|[TS]}[HT]M[NP]AA 3.2632;2.6944;1.6968;1.4668;0.94146;0.33463 -;-;-;-;-;- 147 + 1 2.219 54872.4 1.0 733 2976 3707 DOHH2_400M_050219_1,3711 DOHH2_400M_050219_1,3711,STDKQMGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3713 18.48 127.0 315640.0 25 0 38859.0 35499 STMSTNGIPR 10 75 540.2615134303616 1078.508473927523 2 540.2615234255791 MULTI CID FTMS 0 0 0 3712 271217.03125 0.8144706038907523 1 -0.0051765441894531 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 40.23920728925047 0.1550410903091231 1 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 10 2 + 55.322 0.0 0.0 5.1295 5.1295 77.36 0.0 0.0 0.0 39.30909368620867 1.6782512043525273 1.6782512043525273 2.6884531229258 0 0.805462187404089 0.0 0.3807196863200844 0.3494850021680094 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[TV]|[{I|L}S]}[Q{I|L}]NTS[WM];{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNVVQP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR;{[TV]|[{I|L}S]}[Q{I|L}]GGTS[WM];{[MG]|[TS]}{M(Oxidation (M))|F}STRRQP;{[MG]|[TS]}{M(Oxidation (M))|F}STK[PS]QP;{[MG]|[TS]}{M(Oxidation (M))|F}STNVV[AG]P 5.1295;4.8802;4.6893;4.2798;4.2472;4.0305;3.8355;3.6416;3.5991;3.3975 -;+;-;-;-;-;-;-;-;- + 288 + 1 2.219 37533.0 1.0 734 2977 3712 DOHH2_400M_050219_1,3713 DOHH2_400M_050219_1,3713,STMSTNGIPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3716 18.5 800.0 123180.0 25 0 7547.4 + 7212 EEQTPQNKI 9 118 543.7749121924679 1085.5352714517358 2 543.7748290896416 MULTI CID FTMS 0 0 0 3715 94885.78125 0.1505279181697091 -9 0.2051601409912109 1 Unmodified _EEQTPQNKI_ ENSG00000134333|ENST00000422447|LDHA;ENST00000469976.2_1_11:18418389-18418551:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA 71.92227651296345 0.0203558744033348 1 EEQTPQNK{I|L} 9 0 + 57.451 0.0 0.0 5.2925 5.2925 83.322 0.0 0.0 0.0 3.427545360405105 6.692709926768735 3.427545360405105 8.099077028750806 0 0.5994850021680094 1.3979400086720375 0.3807196863200844 1.16944517631652 + + EEQTPQNK{I|L};[AG]PNK{I|L}TEEQ;EEQTP[AG]NK{I|L};EE[AG]TPQNK{I|L};EEQTPQGGK{I|L};[QP]NK{I|L}TEEQ;[NP]QK{I|L}TEEQ;EEQTP[AG]GGK{I|L};EE[AG]TPQGGK{I|L};EE[AG]TP[AG]NK{I|L} 5.2925;4.5464;4.4442;4.4442;4.4442;3.9441;3.6477;3.5999;3.5999;3.5999 +;-;-;-;-;-;-;-;-;- + 918 + 1 2.219 79319.9 0.4799999892711639 735 2979 3715 DOHH2_400M_050219_1,3716 DOHH2_400M_050219_1,3716,EEQTPQNKI True True EEQTPQNKI 18.500139 543.774829089642 2520810.5 3715.0 nc|ENSG00000134333|P00338-4|LDHA;;nc|ENSG00000134333|P00338-3|LDHA;;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;;ENST00000469976.2_1_11:18418389-18418551:+|nuORF;;nc|ENSG00000134333|P00338-2|LDHA;;nc|ENSG00000134333|P00338-5|LDHA;;ENSG00000134333|ENST00000422447|LDHA 7.114819367726644 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3719 18.516 548.0 144840.0 25 0 14100.0 + 31936 RVDENNPEY 9 88 568.2545654066273 1134.4945778800543 2 568.2545654177666 MULTI CID FTMS 0 0 0 3718 120589.8125 0.8526404101999362 1 -0.0359935760498046 1 Unmodified _RVDENNPEY_ ENSG00000087274|ENST00000683351|ADD1;ENST00000503169.5_1_4:2877642-2906862:+|nuORF;ENST00000508684.5_1_4:2877642-2900342:+|nuORF;ENST00000509039.5_1_4:2877642-2901297:+|nuORF;ENST00000540541.1_1_4:2877642-2877930:+|nuORF;nc|ENSG00000087274|P35611-2|ADD1;nc|ENSG00000087274|P35611-3|ADD1;nc|ENSG00000087274|P35611-4|ADD1;nc|ENSG00000087274|P35611-5|ADD1;nc|ENSG00000087274|P35611-6|ADD1;nc|ENSG00000087274|P35611|ADD1 29.84058131909904 0.1515068451768857 1 [RV]DENN[EP]Y 9 0 + 38.567 0.0 0.0 3.3995 3.3995 79.785 0.0 0.0 0.0 4.137342758552698 12.88032523080816 4.137342758552698 9.208187539523756 0 0.9247425010840048 0.0 0.0 0.4247425010840047 + + [RV]DENN[EP]Y;[RV]DEGGN[EP]Y;[RV]DENGG[EP]Y;[EP]NQVD[RD]Y;[DP]QQVD[RD]Y 3.3995;2.5878;2.5878;2.5156;0.36548 +;-;-;-;- + 172 1 2.219 68198.3 1.0 736 2981 3718 DOHH2_400M_050219_1,3719 DOHH2_400M_050219_1,3719,RVDENNPEY False True RVDENNPEY 18.516391 568.254565417767 636646.9375 3718.0 nc|ENSG00000087274|P35611-3|ADD1;;ENST00000508684.5_1_4:2877642-2900342:+|nuORF;;nc|ENSG00000087274|P35611|ADD1;;ENST00000540541.1_1_4:2877642-2877930:+|nuORF;;nc|ENSG00000087274|P35611-6|ADD1;;ENSG00000087274|ENST00000683351|ADD1;;ENST00000503169.5_1_4:2877642-2906862:+|nuORF;;nc|ENSG00000087274|P35611-4|ADD1;;nc|ENSG00000087274|P35611-5|ADD1;;ENST00000509039.5_1_4:2877642-2901297:+|nuORF;;nc|ENSG00000087274|P35611-2|ADD1 7.672287782033284 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3720 18.526 568.0 155900.0 25 0 21071.0 + 19206 LEGEESRMSGE 11 88 612.263905834809 1222.5132587364178 2 612.2637817263603 MULTI CID FTMS 0 0 0 3718 107251.5859375 0.2007590563106787 -7 0.1221084594726562 2 Unmodified _LEGEESRMSGE_ CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__Q7Z794;ENSG00000167768|ENST00000252244|KRT1;ENSG00000189182|ENST00000341809|KRT77 74.7717668357584 0.0185759530880285 1 {I|L}EGEESRMSGE 11 0 + 107.86 0.0 0.0 8.8231 8.8231 96.772 0.0 0.0 0.0 84.67578224925214 20.329996807303928 20.329996807303928 17.730012720637376 0 1.305462187404089 2.0 1.8882104921644447 0.0 + + {I|L}EGEESRMSGE;{I|L}EWES[VG]MSGE;{I|L}EWWWMSGE;{I|L}EGE[C(Carbamidomethyl (C))H][RH]GE;{I|L}WEES[VG]MSGE;{I|L}WEWWMSGE;{I|L}W{M(Oxidation (M))|F}[WR]DDGE;{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H]S[VG]MSGE;{I|L}{M(Oxidation (M))|F}W[WR]DDGE 8.8231;7.3728;6.6909;6.4803;5.2047;4.5228;3.2817;3.1607;2.8728 +;-;-;-;-;-;-;-;- + 313 + 1 2.219 70638.7 1.0 737 2981 3718 DOHH2_400M_050219_1,3720 DOHH2_400M_050219_1,3720,LEGEESRMSGE True True LEGEESRMSGE 18.526363 612.26378172636 2102268.75 3718.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253 8.449641386667887 2.0 True 11.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 3721 18.54 800.0 51157.0 25 0 6198.4 -1 0 77 711.3106734746987 2841.2135880323945 4 711.8106567263603 MULTI CID FTMS 0 0 0 3718 81679.15625 0.9519828734845232 -4 0.0296783447265625 3 1 [DN]SYT 5 -1 36.414 0.0 0.0 1.2816 0.0 0.0 0.0 2257.9782114056943 2257.9782114056943 21.449791016870066 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.7742275032520141 [DN]SYT 1.2816 - 1264 1 2.219 39791.0 0.449999988079071 738 2981 3718 DOHH2_400M_050219_1,3721 DOHH2_400M_050219_1,3721, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3723 18.545 27.0 1888700.0 25 0 282720.0 + 17583 KPTAAFHLL 9 63 499.2930196942723 996.5714864553446 2 499.2932311892509 MULTI CID FTMS 0 0 0 3722 1978942.75 0.0150980557444583 30 -0.6947898864746094 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 1 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3534102252286 667.3534102252286 23.381681563112405 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 20 + 1 2.237 45778.7 1.0 739 2982 3722 DOHH2_400M_050219_1,3723 DOHH2_400M_050219_1,3723,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3726 18.557 294.0 316770.0 25 0 46753.0 28121 PPPHPPPPP 9 89 466.75381694954825 931.4930809658964 2 466.7534362673759 MULTI CID FTMS 0 0 0 3725 209573.453125 0.7197414239231434 3 -0.0772037506103515 1 Unmodified _PPPHPPPPP_ ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000175879|ENST00000313173|HOXD8;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000175879|P13378-2|HOXD8;REV__ENSG00000175879|ENST00000313173|HOXD8;REV__nc|ENSG00000175879|P13378-2|HOXD8 67.41302359171755 0.0220989861905124 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPPPP 9 2 + 52.641 0.0 0.0 5.6513 5.6513 81.502 0.0 0.0 0.0 4.387116332977712 8.697114610913488 4.387116332977712 4.387116332977712 0 1.841129063296272 0.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPPPP;{[HG]|PP}HPPPPPP;{[TV]|[{I|L}S]}VEPPPPP;[YK]HPPPPP;{[HG]|PP}PHPPPPP;{[NV]|[RG]}{[QS]|[NT]}PPPPP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]PPPP;{[HG]|PP}M{[TV]|[{I|L}S]}PPPP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YK]PPP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PP[YK]PP 5.6513;5.1803;4.9913;4.7531;4.4791;3.7097;2.8998;2.8867;2.5294;2.2733 -;-;-;-;+;-;-;-;-;- + 174 1 2.237 76584.4 1.0 740 2984 3725 DOHH2_400M_050219_1,3726 DOHH2_400M_050219_1,3726,PPPHPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3727 18.571 800.0 97721.0 25 0 9084.1 + -1 DNLDCHFQR 9 95 602.7629211505098 1203.5112893678197 2 602.7621337771416 MULTI CID FTMS 0 0 0 3725 91683.203125 0.8884941355200278 -1 0.0038871765136718 2 Carbamidomethyl (C) _DNLDC(Carbamidomethyl (C))HFQR_ REV__ENSG00000152818|ENST00000367545|UTRN;REV__nc|ENSG00000152818|P46939-2|UTRN 10.073929032068715 0.563993802247229 1 [YT]Q{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 9 -1 + 75.442 0.0 0.0 6.2685 6.2685 89.001 0.0 0.0 0.0 62.15858457933251 16.478174818886373 16.478174818886373 9.208187539523747 0 2.1861818737241734 0.0 0.0 0.6747425010840047 [YT]Q{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR;[YT][AG]{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR;[YT]Q{M(Oxidation (M))|F}GGT{M(Oxidation (M))|F}QR;[YT]Q{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}[AG]R;[YT]{[MS]|[{M(Oxidation (M))|F}A]}GNT{M(Oxidation (M))|F}QR;[YT][AG]{M(Oxidation (M))|F}GGT{M(Oxidation (M))|F}QR;[YT]Q{M(Oxidation (M))|F}GGT{M(Oxidation (M))|F}[AG]R;[YT][AG]{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}[AG]R;[YT]{[MS]|[{M(Oxidation (M))|F}A]}GGGT{M(Oxidation (M))|F}QR;[YT]{[MS]|[{M(Oxidation (M))|F}A]}GNT{M(Oxidation (M))|F}[AG]R 6.2685;5.5034;5.5034;5.5034;4.8378;4.7419;4.7419;4.7419;4.0763;4.0763 -;-;-;-;-;-;-;-;-;- 416 + 1 2.237 61369.5 0.4699999988079071 741 2984 3725 DOHH2_400M_050219_1,3727 DOHH2_400M_050219_1,3727,DNLDCHFQR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3728 18.584 800.0 139540.0 25 0 9470.1 -1 0 74 628.7851226489388 2511.111384729355 4 629.2867309451103 MULTI CID FTMS 0 0 0 3725 78333.046875 0.3222024408338073 -9 0.1450634002685547 3 1 DD 2 -1 19.464 0.0 0.0 0.77511 0.0 0.0 728.3375144896769 1549.695528458953 2278.03304294863 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 DD 0.77511 - 228 + 1 2.237 86539.0 0.449999988079071 742 2984 3725 DOHH2_400M_050219_1,3728 DOHH2_400M_050219_1,3728, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3730 18.599 674.0 102740.0 25 0 4758.3 -1 LVYAEMEK 8 121 512.7563161214583 1023.4980793097168 2 512.7567626833916 MULTI CID FTMS 0 0 0 3729 38338.81640625 0.0674066413261268 10 -0.0971527099609375 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LVYAEMEK_ ENST00000418814.6_2_6:71247997-71248084:+|nuORF 26.88365393820708 0.4786498634179528 1 [PS]AHVDAAEK 10 -1 + 50.231 0.0 0.0 4.9078 4.9078 78.686 0.0 0.0 0.0 2.051821014592363 29.26200448571781 2.051821014592363 4.121804477866476 0 2.45597718523608 0.0 0.3054621874040891 0.0 [PS]AHVDAAEK;{[SA]|[TG]}PHVDAAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WY]AAEK;[TA][YR]DAAEK;{[DS]|[MA]|[CV]|TT}[KS]DV[MD]K;{[VA]|[{I|L}G]}S[WY]AAEK;{[DS]|[MA]|[CV]|TT}[KS]D{[ES]|[DT]|[{I|L}C]}EK;{[{M(Oxidation (M))|F}C]|[YS]}[K{I|L}]DAAEK;{[SA]|[TG]}V[WY]AAEK;[TA]A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[MD]K 4.9078;4.5051;3.0435;3.0215;2.7485;2.4271;2.3379;2.331;2.2193;1.6677 -;-;-;-;-;-;-;-;-;- 455 1 2.237 59853.5 1.0 743 2985 3729 DOHH2_400M_050219_1,3730 DOHH2_400M_050219_1,3730,LVYAEMEK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3731 18.613 800.0 158860.0 25 0 16177.0 + 30602 REYEAQQQY 9 116 607.7754435607733 1213.5363341883465 2 607.7758666872978 MULTI CID FTMS 0 0 0 3729 132414.28125 0.8938208598005616 -1 0.035593032836914 2 Unmodified _REYEAQQQY_ ENSG00000161204|ENST00000429586|ABCF3;ENST00000468892.5_1_3:183907488-183910505:+|nuORF;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;nc|ENSG00000161204|Q9NUQ8-2|ABCF3 53.40400417844725 0.0329064971918313 1 [AG]QY{[SA]|[TG]}AQQQY 11 5 + 87.726 0.0 0.0 7.229 7.229 82.968 0.0 0.0 0.0 15.422207526295082 16.57577319177794 15.422207526295082 1.804560644581315 0 0.8807196863200843 2.0 0.6109243748081782 1.860924374808178 [AG]QY{[SA]|[TG]}AQQQY;[AG]QY[QT]QQQY;[AG]YQ{[SA]|[TG]}AQQQY;[AG]YQ[QT]QQQY;[AG]QYP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QQY;[AG]YQP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QQY;[AG]QY{[SA]|[TG]}AQQ[AG]Y;[AG]QY{[SA]|[TG]}A[AG]QQY;[AG]QY{[SA]|[TG]}AQ[AG]QY;[AG]AGY{[SA]|[TG]}AQQQY 7.229;7.0803;7.065;6.9163;6.8648;6.7009;6.4767;6.4767;6.4767;6.4137 -;-;-;-;-;-;-;-;-;- 3204 1 2.237 95584.7 0.5699999928474426 744 2985 3729 DOHH2_400M_050219_1,3731 DOHH2_400M_050219_1,3731,REYEAQQQY True True REYEAQQQY 18.612613 607.775866687298 642269.9375 3729.0 ENST00000468892.5_1_3:183907488-183910505:+|nuORF;;ENSG00000161204|ENST00000429586|ABCF3;;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;;nc|ENSG00000161204|Q9NUQ8-2|ABCF3 7.6483432451883955 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3732 18.622 536.0 221400.0 25 0 14890.0 + 42401 VTEDGNQHVY 10 142 581.2621053116701 1160.50965769014 2 581.2624389529228 MULTI CID FTMS 0 0 0 3729 126265.4296875 0.1094522505725495 -11 0.2024040222167968 3 Unmodified _VTEDGNQHVY_ ENSG00000121350|ENST00000240651|PYROXD1;nc|ENSG00000121350|Q8WU10-2|PYROXD1 103.35351024395868 0.0068982832659769 1 VTED[Y{I|L}]C(Carbamidomethyl (C))VY 9 4 + 79.381 0.0 0.0 6.8402 6.8402 90.434 0.0 0.0 0.0 32.653631197717985 6.333487245503946 6.333487245503946 9.208187539523747 0 1.2302046884880935 2.0 1.1549471895720984 0.0 VTED[Y{I|L}]C(Carbamidomethyl (C))VY;VTED[Y{I|L}][CG]VY;VT{M(Oxidation (M))|F}YVD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS];VT{M(Oxidation (M))|F}YDV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS];{[TV]|[{I|L}S]}[YC(Carbamidomethyl (C))]EEVYV;{[TV]|[{I|L}S]}[YC(Carbamidomethyl (C))]EVEYV;{[TV]|[{I|L}S]}[HC][HC]VTYV;VT{M(Oxidation (M))|F}YVE[YG][PS];[HV]Q[NG]DETYV;VT{M(Oxidation (M))|F}YD{I|L}[YG][PS] 6.8402;6.0467;5.2993;5.1916;5.0288;4.854;4.7871;4.697;4.6781;4.5893 -;-;-;-;-;-;-;-;-;- 4623 + 1 2.237 93182.0 1.0 745 2985 3729 DOHH2_400M_050219_1,3732 DOHH2_400M_050219_1,3732,VTEDGNQHVY True True VTEDGNQHVY 18.62204 581.262438952923 10559231.0 3729.0 nc|ENSG00000121350|Q8WU10-2|PYROXD1;;ENSG00000121350|ENST00000240651|PYROXD1 8.288321654001871 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3736 18.638 281.0 207150.0 25 0 43104.0 -1 0 88 464.2521786291893 463.24490216258926 1 464.2509643435478 MULTI CID FTMS 0 0 0 3735 77623.75 0.049719214023446 -12 0.1763534545898437 1 1 {[QV]|[N{I|L}]|[RA]|[KV]}{[MS]|[{M(Oxidation (M))|F}A]} 4 -1 + 22.007 0.0 0.0 4.7505 4.7505 81.774 0.0 0.0 0.0 8.511744483784085 1.7161383772921823 1.7161383772921823 8.661764699893073 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{[MS]|[{M(Oxidation (M))|F}A]};[KA][{M(Oxidation (M))|F}V];P[KG]Y 4.7505;2.8807;2.0865 -;-;- 18 1 2.251 51177.8 1.0 746 2988 3735 DOHH2_400M_050219_1,3736 DOHH2_400M_050219_1,3736, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3737 18.652 800.0 106150.0 25 0 11993.0 + 8499 ETDPDAQAKAY 11 108 604.7753015122414 1207.5360500912827 2 604.7754394412041 MULTI CID FTMS 0 0 0 3735 92380.03125 0.6876996060947431 -6 0.0899734497070312 2 Unmodified _ETDPDAQAKAY_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 49.52724829834842 0.1202481389936634 1 {[ET]|[MV]}DPDAQAKAY 11 0 + 54.321 0.0 0.0 4.4985 4.4985 81.251 0.0 0.0 0.0 0.6391849630792379 6.902059908879004 0.6391849630792379 9.128498242810998 0 0.6421590589602533 0.0 0.0 0.0 + + {[ET]|[MV]}DPDAQAKAY;{[ET]|[MV]}DPDA[AG]AKAY;[DP]AQ[VG][TP]PD[DP];[QA][DP]D{[ET]|[MV]}AKAY;{[ET]|[MV]}D[QA][DP]AKAY;[PS][VP]AQADPD[DP];[QA][DP]DA{[ET]|[MV]}KAY;[QA][DP]DAK{[ET]|[MV]}AY;[PS][VP]A[AG]ADPD[DP];[QA][DP]{[C(Carbamidomethyl (C))G]|[NC]}QAKAY 4.4985;3.7425;3.0775;3.0312;2.7428;2.7252;2.5939;2.0293;1.9717;1.741 +;-;-;-;-;-;-;-;-;- + 1051 + 1 2.251 65674.4 0.4900000095367431 747 2988 3735 DOHH2_400M_050219_1,3737 DOHH2_400M_050219_1,3737,ETDPDAQAKAY True True ETDPDAQAKAY 18.651715 604.775439441204 500620.3125 3735.0 ENSG00000132004|ENST00000393261|FBXW9;;nc|ENSG00000132004|Q5XUX1-2|FBXW9 7.725680669148763 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3739 18.658 180.0 397300.0 25 0 40667.0 17694 KPTGVRTNVP 10 74 534.8114447735323 1067.6083366138646 2 534.8118774294853 MULTI CID FTMS 0 0 0 3738 355262.84375 0.6796519456515715 5 -0.0221195220947265 1 Unmodified _KPTGVRTNVP_ ENSG00000165458|ENST00000298229|INPPL1;nc|ENSG00000165458|O15357-2|INPPL1 19.361941925380144 0.5226674314761524 1 KPTG 4 6 48.928 0.0 0.0 4.5829 0.0 0.0 0.0 681.3716524713499 681.3716524713499 37.95880017344075 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.0 + KPTG 4.5829 + + 33 + 1 2.251 59644.2 1.0 748 2989 3738 DOHH2_400M_050219_1,3739 DOHH2_400M_050219_1,3739,KPTGVRTNVP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3745 18.679 95.0 507200.0 25 0 47059.0 + 2698 ATELKNNSY 9 84 520.2573838026545 1038.500214672109 2 520.2572509646416 MULTI CID FTMS 0 0 0 3744 447925.53125 0.5809989460347242 -3 0.012186050415039 1 Unmodified _ATELKNNSY_ ENSG00000100353|ENST00000216190|EIF3D;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 29.081581746732265 0.1611639662936252 1 [TA]E{I|L} 4 5 36.995 0.0 0.0 3.5623 0.0 0.0 0.0 621.2644137018186 621.2644137018186 21.51023442440469 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + [TA]E{I|L} 3.5623 + + 27 + 1 2.251 42310.4 1.0 749 2994 3744 DOHH2_400M_050219_1,3745 DOHH2_400M_050219_1,3745,ATELKNNSY False True ATELKNNSY 18.678619 520.257250964642 7028202.5 3744.0 nc|ENSG00000100353|O15371-2|EIF3D;;ENSG00000100353|ENST00000216190|EIF3D;;nc|ENSG00000100353|O15371-3|EIF3D;;ENST00000462641.1_1_22:36907036-36908721:-|nuORF 6.429324626922607 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3746 18.682 153.0 633340.0 25 0 57541.0 12910 GYILHGAPKL 10 101 356.8771245680199 1067.6095443042598 3 356.8766052126884 MULTI CID FTMS 0 0 0 3744 143676.546875 0.4857366063080421 9 -0.2683258056640625 2 Unmodified _GYILHGAPKL_ ENSG00000165124|ENST00000374469|SVEP1;nc|ENSG00000165124|Q4LDE5-3|SVEP1 11.640296217721598 0.652229146672156 1 HTPR{I|L} 5 7 30.662 0.0 0.0 2.872 0.0 0.0 445.2536183087906 0.0 445.2536183087906 0.0 23.672137691284405 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 HTPR{I|L} 2.872 - 105 1 2.251 82768.9 1.0 750 2994 3744 DOHH2_400M_050219_1,3746 DOHH2_400M_050219_1,3746,GYILHGAPKL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3748 18.699 800.0 89212.0 25 0 12405.0 + -1 MPPQDQTLCP 10 104 601.7628814477704 1201.511209962341 2 601.7633544802666 MULTI CID FTMS 0 0 0 3747 74606.8125 0.6180192650016548 -4 0.0200042724609375 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))PPQDQTLC(Carbamidomethyl (C))P_ REV__ENST00000560079.6_1_15:85326057-85326105:+|nuORF 12.240655878213236 0.6421556946785427 1 {[QD]|[EN]|[WG]|[KD]|[RS]}AY[HT]QQDP 10 -1 + 50.015 0.0 0.0 4.1627 4.1627 72.319 0.0 0.0 0.0 1.4063372513481909 8.061799739838875 1.4063372513481909 1.4063372513481909 0 0.0 0.0 0.6382104921644451 0.4247425010840047 {[QD]|[EN]|[WG]|[KD]|[RS]}AY[HT]QQDP;[AG]NA{[DS]|[MA]|[CV]|TT}EAQQDP;[AG]N{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQDP;[AG]GQ{[DS]|[MA]|[CV]|TT}EAQQDP;{[QN]|[E{I|L}]|[KN]}A{[DS]|[MA]|[CV]|TT}EAQQDP;{[QD]|[EN]|[WG]|[KD]|[RS]}AY[HT][AG]QDP;{[QD]|[EN]|[WG]|[KD]|[RS]}AY[HT]Q[AG]DP;[AG]GGA{[DS]|[MA]|[CV]|TT}EAQQDP;[AG]GG{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQDP;[AG]NA{[DS]|[MA]|[CV]|TT}EA[AG]QDP 4.1627;4.0456;3.7561;3.699;3.5256;3.3999;3.3999;3.3639;3.3122;3.2884 -;-;-;-;-;-;-;-;-;- 999 1 2.268 56960.6 0.4900000095367431 751 2995 3747 DOHH2_400M_050219_1,3748 DOHH2_400M_050219_1,3748,MPPQDQTLCP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3749 18.709 564.0 162450.0 25 0 15033.0 + + 4351 DAYTKKEL 8 122 484.2583843879534 966.5022158427068 2 484.2560912966728 MULTI CID FTMS 0 0 0 3747 91160.0625 1.0 0 0.0 2 Unmodified _DASPLASPPL_ nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1 30.63653989081413 0.2803493085145199 1 DAYTK 5 -1 56.013 0.0 0.0 5.7955 0.0 0.0 0.0 385.2084139459594 385.2084139459594 39.050697163554986 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 DAYTK 5.7955 - 86 + 1 2.268 75137.5 1.0 752 2995 3747 DOHH2_400M_050219_1,3749 DOHH2_400M_050219_1,3749,DASPLASPPL False False DAYTKKEL 18.709233 484.256091296673 370573.40625 3747.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 6.191799163818359 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3750 18.723 800.0 145160.0 25 0 25423.0 + -1 EELKQQQKL 9 126 572.3272156962263 571.3199392296262 1 572.3237182497978 MULTI CID FTMS 0 0 0 3747 116576.296875 0.6462701890055945 -1 0.0078182220458984 3 nc|ENSG00000163938|Q9BVP2-2|GNL3;ENST00000496254.5_1_3:52720087-52724795:+|nuORF;ENST00000462550.5_1_3:52720108-52721634:+|nuORF;ENSG00000163938|ENST00000418458|GNL3;ENST00000468146.5_1_3:52720039-52723083:+|nuORF;ENST00000492349.5_1_3:52720087-52722217:+|nuORF 1 EE{I|L} 3 -1 31.427 0.0 0.0 5.5007 0.0 0.0 0.0 197.12600547402 197.12600547402 19.41962823435958 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8494850021680094 0.0 EE{I|L} 5.5007 - 127 1 2.268 91726.8 0.5400000214576721 753 2995 3747 DOHH2_400M_050219_1,3750 DOHH2_400M_050219_1,3750, False False EELKQQQKL 18.723065 572.323718249798 875532.5 3747.0 nc|ENSG00000163938|Q9BVP2-2|GNL3;;ENST00000496254.5_1_3:52720087-52724795:+|nuORF;;ENST00000462550.5_1_3:52720108-52721634:+|nuORF;;ENSG00000163938|ENST00000418458|GNL3;;ENST00000468146.5_1_3:52720039-52723083:+|nuORF;;ENST00000492349.5_1_3:52720087-52722217:+|nuORF 3.2731312115987143 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3752 18.728 53.0 824570.0 25 0 63845.0 + 34147 SLLYDSIVP 9 67 503.7745778937185 1005.534602854237 2 503.7745239138603 MULTI CID FTMS 0 0 0 3751 751220.125 0.18450609683351 11 -0.3988246917724609 1 Unmodified _SLLYDSIVP_ REV__ENSG00000197386|ENST00000355072|HTT 28.486842064014134 0.1687311288560894 1 VT{I|L}DT 5 -1 60.305 0.0 0.0 5.9973 0.0 0.0 0.0 473.2358492486938 473.2358492486938 43.64970648723208 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.4247425010840047 0.0 VT{I|L}DT 5.9973 - 121 + 1 2.268 40255.6 1.0 754 2996 3751 DOHH2_400M_050219_1,3752 DOHH2_400M_050219_1,3752,SLLYDSIVP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3753 18.742 800.0 144320.0 25 0 31528.0 23166 LSQRWTVP 8 124 493.7728344890879 985.531116044976 2 493.7725402712822 MULTI CID FTMS 0 0 0 3751 42515.56640625 0.0827731787883048 13 -0.4346771240234375 2 Unmodified _LSQRWTVP_ ENSG00000174038|ENST00000312292|C9orf131;nc|ENSG00000174038|Q5VYM1-2|SPATA31G1;nc|ENSG00000174038|Q5VYM1-3|SPATA31G1 13.50788311687929 0.7113601687236069 1 {[QN]|[E{I|L}]|[KN]}[H{I|L}]{M(Oxidation (M))|F}N[{I|L}T] 8 7 + 29.498 0.0 0.0 2.9931 2.9931 76.552 0.0 0.0 0.0 7.979487262823184 6.320232147054057 6.320232147054057 8.880936268937255 0 0.0 2.0 0.0 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}[H{I|L}]{M(Oxidation (M))|F}N[{I|L}T];{[TV]|[{I|L}S]}[WP]VGN[{I|L}T];{[QN]|[E{I|L}]|[KN]}[H{I|L}]{M(Oxidation (M))|F}GG[{I|L}T];{[TV]|[{I|L}S]}[WP]RN[{I|L}T];[VP]S[W{I|L}]GN[{I|L}T];[VP]{[WT]|[RM]}VGN[{I|L}T];{[TV]|[{I|L}S]}[WP]VGGG[{I|L}T];{[NV]|[RG]}[RN]VGN[{I|L}T];[VP]{[WT]|[RM]}RN[{I|L}T];{[TV]|[{I|L}S]}[WP]RGG[{I|L}T] 2.9931;2.092;2.0533;1.4347;1.4017;1.2534;1.1577;0.93777;0.59608;0.49485 -;-;-;-;-;-;-;-;-;- 238 1 2.268 91141.1 0.4699999988079071 755 2996 3751 DOHH2_400M_050219_1,3753 DOHH2_400M_050219_1,3753,LSQRWTVP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3754 18.745 152.0 427500.0 25 0 22821.0 + 32740 SEDEIKKAY 9 107 361.5171554961099 1081.52963708853 3 361.5167724490166 MULTI CID FTMS 0 0 0 3751 275381.6875 0.7171238790023626 -2 0.0492668151855468 3 Unmodified _SEDEIKKAY_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 32.30548876998284 0.1201446275138228 1 DEYS 4 7 30.79 0.0 0.0 2.8469 0.0 0.0 569.3577748029312 0.0 569.3577748029312 0.0 7.882418650521359 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DEYS 2.8469 - 102 1 2.268 57763.8 1.0 756 2996 3751 DOHH2_400M_050219_1,3754 DOHH2_400M_050219_1,3754,SEDEIKKAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3755 18.751 369.0 334730.0 25 0 41561.0 19280 LEKQQKIEQ 9 148 381.884861769353 1142.632755908259 3 381.8844482302666 MULTI CID FTMS 0 0 0 3751 116072.453125 0.9324326699001952 2 -0.0540599822998046 4 Unmodified _LEKQQKIEQ_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 20.580933911654288 0.2795815587326093 1 KQE 3 6 23.751 0.0 0.0 2.0786 0.0 0.0 388.198106949133 366.2164705865844 754.4145775357174 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9476212463643424 0.3807196863200844 KQE 2.0786 - 248 + 1 2.268 103312.2 1.0 757 2996 3751 DOHH2_400M_050219_1,3755 DOHH2_400M_050219_1,3755,LEKQQKIEQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3757 18.756 122.0 405830.0 25 0 29564.0 + 32741 SEDEIKKAY 9 78 541.771992300522 1081.529431667844 2 541.7720214724541 MULTI CID FTMS 0 0 0 3756 405037.90625 0.985266700265982 -1 0.0282535552978515 1 Unmodified _SEDEIKKAY_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 43.77239144664712 0.0547478964384323 1 {[ES]|[DT]|[{I|L}C]}DE{I|L}KKAY 9 0 + 65.072 0.0 0.0 6.0166 6.0166 92.925 0.0 0.0 0.0 36.56443293991353 14.09256854528806 14.09256854528806 40.49926291259104 0 1.6989700043360187 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}DE{I|L}KKAY;{[ES]|[DT]|[{I|L}C]}D[WK][{I|L}A]AY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KK{[ES]|[DT]|[{I|L}C]}AY 6.0166;2.272;0.5225 +;-;- + 112 + 1 2.268 45267.2 1.0 758 2997 3756 DOHH2_400M_050219_1,3757 DOHH2_400M_050219_1,3757,SEDEIKKAY True True SEDEIKKAY 18.756416 541.772021472454 3415808.625 3756.0 ENSG00000168259|ENST00000457167|DNAJC7;;nc|ENSG00000168259|Q99615-2|DNAJC7 6.910016059875488 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3758 18.765 470.0 155270.0 25 0 15458.0 + 31751 RSDDSGHLY 9 83 525.2351129668723 1048.4556730005445 2 525.2357665896416 MULTI CID FTMS 0 0 0 3756 108988.203125 0.992637167854457 -1 0.0282535552978515 2 Unmodified _RSDDSGHLY_ ENST00000555806.5_1_12:97313883-97318704:+|nuORF 12.240655878213236 0.5053430591993562 1 [HM][WY]H{I|L}Y 7 6 [HM][WY]H + + 25.969 6.4782 0.85883 2.4769 2.4769 49.461 0.0 0.0 0.0 0.0 12.713118258533385 0.0 0.0 0 0.5 0.0 0.0 0.0 [HM][WY]H{I|L}Y 2.4769 - 63 + 1 2.268 61689.2 1.0 759 2997 3756 DOHH2_400M_050219_1,3758 DOHH2_400M_050219_1,3758,RSDDSGHLY False True RSDDSGHLY 18.764752 525.235766589642 548560.0625 3756.0 ENST00000555806.5_1_12:97313883-97318704:+|nuORF 5.201791763305664 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3759 18.769 235.0 206280.0 25 0 16676.0 -1 QSGCSKKQAM 10 87 380.8444258180907 1139.511448054472 3 380.8451415896416 MULTI CID FTMS 0 0 0 3756 155767.96875 0.7643309904373811 -2 0.0697021484375 3 Carbamidomethyl (C),Oxidation (M) _QSGC(Carbamidomethyl (C))SKKQAM(Oxidation (M))_ ENSG00000112473|ENST00000374677|SLC39A7 4.715918219556657 0.704822610516493 1 [QP][C(Carbamidomethyl (C))H][RP]QSM 9 -1 [QP][C(Carbamidomethyl (C))H][RP]Q + + 16.454 3.1329 0.34678 1.4439 1.4439 48.505 0.0 0.0 0.0 0.0 -4.259687322722812 -4.259687322722812 0.0 0 0.0 0.0 0.0 0.0 [QP][C(Carbamidomethyl (C))H][RP]QSM 1.4439 - 39 + 1 2.268 44177.7 1.0 760 2997 3756 DOHH2_400M_050219_1,3759 DOHH2_400M_050219_1,3759,QSGCSKKQAM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3760 18.777 451.0 236160.0 25 0 22337.0 + -1 DMRLYCPL 8 94 534.2559651768735 1066.4973774205469 2 534.2559081912041 MULTI CID FTMS 0 0 0 3756 113576.3984375 0.6168116353029007 1 -0.0258064270019531 4 Carbamidomethyl (C) _DMRLYC(Carbamidomethyl (C))PL_ REV__ENSG00000162073|ENST00000318782|PAQR4;REV__nc|ENSG00000162073|Q8N4S7-2|PAQR4;REV__nc|ENSG00000162073|Q8N4S7-3|PAQR4 12.531546534597751 0.7257836412119636 1 VD 2 -1 20.969 0.0 0.0 1.9662 0.0 0.0 0.0 849.3782520370755 849.3782520370755 -2.379837050383106 0.0 -2.379837050383106 0.0 0 0.0 0.0 0.0 0.0 VD 1.9662 - 38 + 1 2.268 87999.2 1.0 761 2997 3756 DOHH2_400M_050219_1,3760 DOHH2_400M_050219_1,3760,DMRLYCPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3762 18.784 156.0 458950.0 25 0 137490.0 -1 0 89 490.2854974921961 489.2782210255961 1 490.2851135134697 MULTI CID FTMS 0 0 0 3761 437311.15625 0.180915029506021 -138 2.484779357910156 1 1 H{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3 -1 4.3139 0.0 0.0 0.88169 0.0 0.0 74.07596380078986 0.0 74.07596380078986 0.0 2.720136122529608 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 H{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 0.88169 - 14 + 1 2.268 58228.1 1.0 762 2998 3761 DOHH2_400M_050219_1,3762 DOHH2_400M_050219_1,3762, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3763 18.798 800.0 46676.0 25 0 2438.8 -1 0 60 711.8071344081893 2843.199431766357 4 712.0565673708916 MULTI CID FTMS 0 0 0 3761 61511.20703125 0.5320017940978155 1 -0.0207939147949218 2 1 HS 2 -1 15.217 0.0 0.0 0.53519 0.0 0.0 984.4884165245344 1631.5960678513632 2616.0844843758973 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 HS 0.53519 - 36 + 1 2.268 36589.4 0.5 763 2998 3761 DOHH2_400M_050219_1,3763 DOHH2_400M_050219_1,3763, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3765 18.804 203.0 377570.0 25 0 43383.0 + 17655 KPTGARPSAL 10 79 499.2930196942723 996.5714864553446 2 499.2931701540947 MULTI CID FTMS 0 0 0 3764 310510.90625 0.0023689977751123 47 -1.2410907745361328 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 23.78978130925829 0.4341852049148378 1 KPTG 4 6 45.433 0.0 0.0 4.5589 0.0 0.0 0.0 610.3291109674436 610.3291109674436 33.21456278567766 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPTG 4.5589 + + 47 + 1 2.268 66240.9 1.0 764 2999 3764 DOHH2_400M_050219_1,3765 DOHH2_400M_050219_1,3765,KPTGARPSAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3766 18.807 123.0 473290.0 25 0 35813.0 -1 SSMYRESCK 9 96 383.167071817924 1146.479386053972 3 383.1674682497978 MULTI CID FTMS 0 0 0 3764 392234.9375 0.7556960853174629 -2 0.046600341796875 2 Carbamidomethyl (C) _SSMYRESC(Carbamidomethyl (C))K_ ENSG00000131482|ENST00000253801|G6PC1 6.630372943996041 0.683221206560437 1 Y 1 -1 13.979 0.0 0.0 1.2193 0.0 0.0 965.4054247276034 0.0 965.4054247276034 0.0 -6.997418399861747 -6.997418399861747 0.0 0 0.0 0.0 0.0 0.0 Y 1.2193 + + 74 + 1 2.268 54515.3 1.0 765 2999 3764 DOHH2_400M_050219_1,3766 DOHH2_400M_050219_1,3766,SSMYRESCK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3767 18.815 434.0 210390.0 25 0 23329.0 -1 SSSCLCLHPS 10 98 574.2480132786332 1146.4814736240662 2 574.2479736208916 MULTI CID FTMS 0 0 0 3764 161321.75 0.6903879752597968 -2 0.046600341796875 3 2 Carbamidomethyl (C) _SSSC(Carbamidomethyl (C))LC(Carbamidomethyl (C))LHPS_ ENST00000368026.10_1_1:160970072-160970453:-|nuORF 13.042465956692816 0.6287021003332052 1 SSDKG 5 -1 58.742 0.0 0.0 5.1237 0.0 0.0 0.0 669.2504976861936 669.2504976861936 36.97112801755864 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.3807196863200844 SSDKG 5.1237 - 166 + 1 2.268 70535.8 1.0 766 2999 3764 DOHH2_400M_050219_1,3767 DOHH2_400M_050219_1,3767,SSSCLCLHPS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3769 18.831 800.0 128610.0 25 0 9365.3 + 29928 QSKLFEEEM 9 134 570.7637249143453 1139.5128968954905 2 570.7643310427666 MULTI CID FTMS 0 0 0 3768 158686.328125 1.0 0 0.0 1 Unmodified _QSKLFEEEM_ REV__ENSG00000256660|ENST00000338896|CLEC12B;REV__nc|ENSG00000256660|Q2HXU8-2|CLEC12B 38.61474834105838 0.0830609365873449 1 {[QS]|[NT]}K{[C(Carbamidomethyl (C))G]|[NC]}SKQSM 10 -1 + 61.398 0.0 0.0 5.3881 5.3881 78.883 0.0 0.0 0.0 6.830432995100004 16.53212513775344 6.830432995100004 3.0102999566398125 0 1.5 0.744727494896694 0.2742275032520141 0.7614393726401688 {[QS]|[NT]}K{[C(Carbamidomethyl (C))G]|[NC]}SKQSM;{[QS]|[NT]}K{[C(Carbamidomethyl (C))G]|[NC]}KSQSM;{[QS]|[NT]}K[HA]HSQSM;[AG]SK{[C(Carbamidomethyl (C))G]|[NC]}SKQSM;{[QN]|[E{I|L}]|[KN]}T{[C(Carbamidomethyl (C))G]|[NC]}SKQSM;{[QS]|[NT]}K{[C(Carbamidomethyl (C))G]|[NC]}SK[AG]SM;[AG]SK{[C(Carbamidomethyl (C))G]|[NC]}KSQSM;{[QN]|[E{I|L}]|[KN]}TP{M(Oxidation (M))|F}TSQSM;[AG]SK[HA]HSQSM;{[QN]|[E{I|L}]|[KN]}T{[C(Carbamidomethyl (C))G]|[NC]}KSQSM 5.3881;5.1239;4.9694;4.7886;4.5951;4.5838;4.5245;4.4942;4.3699;4.3309 -;-;-;-;-;-;-;-;-;- 1959 1 2.268 81547.2 0.5899999737739563 767 3000 3768 DOHH2_400M_050219_1,3769 DOHH2_400M_050219_1,3769,QSKLFEEEM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3770 18.838 379.0 258320.0 25 0 27694.0 + 23394 LTDVREQNKY 10 114 422.5544127630576 1264.6414088893728 3 422.5543395876884 MULTI CID FTMS 0 0 0 3768 176862.296875 0.6593226708773151 -2 0.037485122680664 2 Unmodified _LTDVREQNKY_ ENSG00000176208|ENST00000321990|ATAD5 32.78568957990786 0.2337485590374503 1 {I|L}TD[TP]V 6 7 53.918 0.0 0.0 4.2635 0.0 0.0 0.0 635.2898043268186 635.2898043268186 37.72013612252961 0.0 0.0 0.0 0 0.7887254899964358 2.0 0.0 0.0 {I|L}TD[TP]V 4.2635 - 500 + 1 2.268 88428.5 1.0 768 3000 3768 DOHH2_400M_050219_1,3770 DOHH2_400M_050219_1,3770,LTDVREQNKY False True LTDVREQNKY 18.837809 422.554339587688 1031680.6875 3768.0 ENSG00000176208|ENST00000321990|ATAD5 2.4184507528940835 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3771 18.849 664.0 104250.0 25 0 9523.9 + 26144 NPTIKPHSV 9 111 496.78019065331387 991.5458283734278 2 496.7800475955009 MULTI CID FTMS 0 0 0 3768 107396.984375 0.6028488953511727 3 -0.1275138854980468 3 Unmodified _NPTIKPHSV_ ENSG00000102606|ENST00000646102|ARHGEF7;nc|ENSG00000102606|Q14155-1|ARHGEF7;nc|ENSG00000102606|Q14155-2|ARHGEF7;nc|ENSG00000102606|Q14155-3|ARHGEF7;nc|ENSG00000102606|Q14155-5|ARHGEF7;nc|ENSG00000102606|Q14155-6|ARHGEF7;nc|ENSG00000102606|Q14155|ARHGEF7 49.55428908609986 0.0413471690215031 1 NPT{I|L}[KP]HSV 9 0 + 74.019 0.0 0.0 7.465 7.465 94.227 0.0 0.0 0.0 16.197887582883936 13.661600277577008 13.661600277577008 13.661600277577008 0 0.805462187404089 1.5228787452803376 1.1861818737241734 0.0 + + NPT{I|L}[KP]HSV;NPT{I|L}[KP][VS]H;NPT{I|L}[VS][HK]P;NPT{I|L}[VS][KP]H;[QT][VP][KP]HSV;[QT][{I|L}T]KP[HA]P 7.465;6.0872;5.0382;4.9983;1.518;0.037217 +;-;-;-;-;- + 185 + 1 2.268 56486.1 1.0 769 3000 3768 DOHH2_400M_050219_1,3771 DOHH2_400M_050219_1,3771,NPTIKPHSV True True NPTIKPHSV 18.849358 496.780047595501 969615.25 3768.0 nc|ENSG00000102606|Q14155-2|ARHGEF7;;nc|ENSG00000102606|Q14155-6|ARHGEF7;;nc|ENSG00000102606|Q14155-1|ARHGEF7;;nc|ENSG00000102606|Q14155-5|ARHGEF7;;nc|ENSG00000102606|Q14155|ARHGEF7;;nc|ENSG00000102606|Q14155-3|ARHGEF7;;ENSG00000102606|ENST00000646102|ARHGEF7 7.803423245747884 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3772 18.863 800.0 126660.0 25 0 10942.0 + 18803 LAQTTRTAY 9 131 512.7749777722954 1023.5354026113909 2 512.7749511599541 MULTI CID FTMS 0 0 0 3768 94512.25 0.7271723999307305 -2 0.037485122680664 4 Unmodified _LAQTTRTAY_ ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;ENST00000540844.5_1_21:30439913-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8 49.55428908609986 0.0413471690215031 1 {I|L}AQTT 5 4 68.047 0.0 0.0 6.6483 0.0 0.0 0.0 506.2376497858032 506.2376497858032 46.28144697160131 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.5 0.3807196863200844 + {I|L}AQTT 6.6483 + + 386 + 1 2.268 82268.3 0.4699999988079071 770 3000 3768 DOHH2_400M_050219_1,3772 DOHH2_400M_050219_1,3772,LAQTTRTAY True True LAQTTRTAY 18.863187 512.774951159954 574124.8125 3768.0 ENST00000540844.5_1_21:30439913-30445917:-|nuORF;;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 6.1388020515441895 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3774 18.879 716.0 169390.0 25 0 15647.0 28073 PPHPPPPPP 9 126 466.75381694954825 931.4930809658964 2 466.7529785037041 MULTI CID FTMS 0 0 0 3773 91545.875 0.3143974460710461 20 -0.5388736724853516 1 Unmodified _PPHPPPPPP_ ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000066855|ENST00000262146|MTFR1;ENSG00000163064|ENST00000295206|EN1;ENSG00000175879|ENST00000313173|HOXD8;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000066855|Q15390-2|MTFR1;nc|ENSG00000175879|P13378-2|HOXD8;REV__nc|ENSG00000182095|O15417-2|TNRC18 36.46614268402704 0.0948557732959553 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK] 8 3 + 26.815 0.0 0.0 2.8787 2.8787 69.239 0.0 0.0 0.0 0.6168419538669312 10.705485788669089 0.6168419538669312 1.7428919692126783 0 0.6989700043360187 0.0 0.2614393726401688 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK];{[HG]|PP}HPPP[YK];[VP][MT]PP[YK];{[NV]|[RG]}{[QS]|[NT]}PP[YK];{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}PP[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]P[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YK][YK];{[HG]|PP}H[YK][YK] 2.8787;2.6916;1.936;1.3425;1.119;1.0555;0.52954;0.34244 -;-;-;-;-;-;-;- 119 1 2.268 95888.3 1.0 771 3001 3773 DOHH2_400M_050219_1,3774 DOHH2_400M_050219_1,3774,PPHPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3775 18.885 288.0 189140.0 25 0 34509.0 28232 PQQPAAYAL 9 79 479.7513066447202 957.4880603562405 2 479.7513915896416 MULTI CID FTMS 0 0 0 3773 159392.515625 0.3648280400336892 -3 0.086029052734375 2 Unmodified _PQQPAAYAL_ ENSG00000157303|ENST00000375472|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;nc|ENSG00000157303|Q96L08-3|SUSD3 28.486842064014134 0.1687311288560894 1 PQDR 4 7 57.528 0.0 0.0 6.0082 0.0 0.0 0.0 458.23594080142817 458.23594080142817 40.62199308628821 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.3807196863200844 PQDR 6.0082 - 27 + 1 2.268 49087.3 1.0 772 3001 3773 DOHH2_400M_050219_1,3775 DOHH2_400M_050219_1,3775,PQQPAAYAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3777 18.901 795.0 132190.0 25 0 10102.0 + 42402 VTEDGNQHVY 10 127 581.2621053116701 1160.50965769014 2 581.2622558474541 MULTI CID FTMS 0 0 0 3776 219325.3125 0.1901205192907147 6 -0.2691478729248047 1 Unmodified _VTEDGNQHVY_ ENSG00000121350|ENST00000240651|PYROXD1;nc|ENSG00000121350|Q8WU10-2|PYROXD1 82.5293158979368 0.0149949422200525 1 VTED[Y{I|L}]C(Carbamidomethyl (C))VY 9 4 + 70.489 0.0 0.0 6.074 6.074 88.894 0.0 0.0 0.0 32.049895254253045 2.472572544702928 2.472572544702928 9.208187539523756 0 1.1382104921644451 2.0 0.4247425010840047 0.0 VTED[Y{I|L}]C(Carbamidomethyl (C))VY;VTED[Y{I|L}][CG]VY;VTED[Y{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q;VTED{[RE]|[WV]}{[QG]|[NA]}{NN|[MP]|[D{I|L}]|[EV]};VTP{M(Oxidation (M))|F}G[RD]{[SA]|[TG]}[DP];VTP{M(Oxidation (M))|F}G[RD]{[DA]|[EG]}[PS];VT[Y{M(Oxidation (M))|F}]DV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS];VT[Y{M(Oxidation (M))|F}]VD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS];VT[WD][WK]D[DP];VTPTYY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS] 6.074;5.2805;4.8546;4.4978;4.3404;4.295;4.1649;4.0132;3.7403;3.6703 -;-;-;-;-;-;-;-;-;- 2914 + 1 2.268 83492.7 1.0 773 3002 3776 DOHH2_400M_050219_1,3777 DOHH2_400M_050219_1,3777,VTEDGNQHVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3778 18.915 800.0 249450.0 25 0 14076.0 + 33035 SEPIHVRKY 9 177 376.87739624934426 1127.6103593482328 3 376.8766967654228 MULTI CID FTMS 0 0 0 3776 146172.984375 0.5360473799257252 -2 0.0700969696044921 2 Unmodified _SEPIHVRKY_ chr1:241849027-241849109|30|10.2|0.38|4.75|+|ENST00000450748|EXO1,EXO1;ENSG00000174371|ENST00000366548|EXO1;ENST00000493702.5_1_1:242013727-242017913:+|nuORF;nc|ENSG00000174371|Q9UQ84-4|EXO1 18.373094154950223 0.3393451798331396 1 {[ES]|[DT]|[{I|L}C]}P{I|L}HV[RK]Y 9 0 {[ES]|[DT]|[{I|L}C]} + + 31.625 2.8432 1.3158 2.8046 2.8046 50.054 0.0 0.0 0.0 0.0 9.119642813315458 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}P{I|L}HV[RK]Y 2.8046 + + 238 + 1 2.268 160802.2 0.959999978542328 774 3002 3776 DOHH2_400M_050219_1,3778 DOHH2_400M_050219_1,3778,SEPIHVRKY False True SEPIHVRKY 18.914845 376.876696765423 1351000.5 3776.0 nc|ENSG00000174371|Q9UQ84-4|EXO1;;ENST00000493702.5_1_1:242013727-242017913:+|nuORF;;ENSG00000174371|ENST00000366548|EXO1;;chr1:241849027-241849109|30|10.2|0.38|4.75|+|ENST00000450748|EXO1,EXO1 4.206481546163559 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3779 18.929 800.0 56118.0 25 0 4605.1 + 30458 RDWWFHWHPHY 11 83 833.8730989366478 1665.7316449400955 2 833.8736450076103 MULTI CID FTMS 0 0 0 3776 91999.7421875 1.0 0 0.0 3 Unmodified _RDWWFHWHPHY_ REV__ENST00000331803.8_1_7:48142961-48146533:+|nuORF 1.1933415558491238 0.8695176722560516 1 {NN|[MP]|[D{I|L}]|[EV]}PTT{I|L}SNGS 10 -1 41.569 0.0 0.0 2.4956 0.0 0.0 0.0 677.2662878446455 677.2662878446455 9.965394678904929 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.424742501084005 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}PTT{I|L}SNGS 2.4956 - 2257 1 2.268 35460.7 0.4199999868869781 775 3002 3776 DOHH2_400M_050219_1,3779 DOHH2_400M_050219_1,3779,RDWWFHWHPHY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3780 18.942 778.0 114180.0 25 0 13608.0 -1 LFWKRHFCRYK 11 101 547.6248856457805 1639.8528275375415 3 547.6251708865166 MULTI CID FTMS 0 0 0 3776 75875.7109375 0.7292798459035311 -2 0.0700969696044921 4 Carbamidomethyl (C) _LFWKRHFC(Carbamidomethyl (C))RYK_ ENST00000489708.1_1_7:33545204-33545258:+|nuORF 10.315234532428624 0.8205777915985574 1 KAD 3 -1 31.682 0.0 0.0 1.932 0.0 0.0 0.0 1322.6669598091603 1322.6669598091603 3.182503180159344 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 KAD 1.932 - 182 + 1 2.268 71877.0 1.0 776 3002 3776 DOHH2_400M_050219_1,3780 DOHH2_400M_050219_1,3780,LFWKRHFCRYK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3782 18.955 498.0 226200.0 25 0 31516.0 + 2699 ATELKNNSY 9 134 520.2573838026545 1038.500214672109 2 520.2577392458916 MULTI CID FTMS 0 0 0 3781 163335.90625 0.211861085739074 6 -0.2156181335449218 1 Unmodified _ATELKNNSY_ ENSG00000100353|ENST00000216190|EIF3D;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 18.1463463914782 0.3454829746528889 1 [TA]E{I|L} 4 5 29.469 0.0 0.0 2.8377 0.0 0.0 0.0 621.2631319635374 621.2631319635374 13.984484532805157 0.0 0.0 0.0 0 0.2302046884880938 1.0969100130080565 0.0 0.0 + [TA]E{I|L} 2.8377 + + 45 + 1 2.268 89633.4 1.0 777 3003 3781 DOHH2_400M_050219_1,3782 DOHH2_400M_050219_1,3782,ATELKNNSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3783 18.956 65.0 896630.0 25 0 104640.0 19296 LEKSLGTGL 9 94 459.26902393340487 916.5234949336098 2 459.2687866091728 MULTI CID FTMS 0 0 0 3781 708770.1875 0.7479527684577647 -1 0.0574169158935546 2 Unmodified _LEKSLGTGL_ ENSG00000116668|ENST00000367500|SWT1 30.63653989081413 0.1413794767160703 1 {[QN]|[E{I|L}]|[KN]}KS{I|L}GTG{I|L} 9 0 {[QN]|[E{I|L}]|[KN]} + + 30.856 23.076 9.5307 3.3666 3.3666 51.338 0.0 0.0 0.0 0.0 21.12404479047257 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 + + {[QN]|[E{I|L}]|[KN]}KS{I|L}GTG{I|L} 3.3666 + + 76 + 1 2.268 49151.2 1.0 778 3003 3781 DOHH2_400M_050219_1,3783 DOHH2_400M_050219_1,3783,LEKSLGTGL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3784 18.96 158.0 400850.0 25 0 38709.0 + 28347 PSDPKQYRY 9 79 385.19349738945766 1152.558662768573 3 385.1933166384697 MULTI CID FTMS 0 0 0 3781 220301.8125 0.5956146944682115 -2 0.0789699554443359 3 Unmodified _PSDPKQYRY_ ENSG00000078618|ENST00000352171|NRDC;ENST00000491410.1_1_1:52305873-52344287:-|nuORF;nc|ENSG00000078618|O43847-2|NRDC 46.020951573049366 0.0490941689151868 1 [VG]AWSQKP 8 8 42.393 0.0 0.0 3.6782 0.0 0.0 0.0 296.09170770013685 296.09170770013685 29.206970478455943 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.3494850021680094 0.805462187404089 [VG]AWSQKP 3.6782 - 146 1 2.268 61681.6 1.0 779 3003 3781 DOHH2_400M_050219_1,3784 DOHH2_400M_050219_1,3784,PSDPKQYRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3785 18.963 207.0 370200.0 25 0 32369.0 -1 MPAHGRHRC 9 102 374.5130937747558 1120.5174519244674 3 374.5133544802666 MULTI CID FTMS 0 0 0 3781 176765.15625 0.4276250684738677 -3 0.1275138854980468 4 Carbamidomethyl (C) _MPAHGRHRC(Carbamidomethyl (C))_ ENST00000397354.7_1_X:39932934-39933000:-|nuORF 7.608950283845883 0.6490595679007971 1 MPA{I|L} 4 -1 27.423 0.0 0.0 2.4473 0.0 0.0 0.0 705.2763765924436 705.2763765924436 18.970901162330904 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MPA{I|L} 2.4473 - 21 + 1 2.268 65949.8 1.0 780 3003 3781 DOHH2_400M_050219_1,3785 DOHH2_400M_050219_1,3785,MPAHGRHRC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3786 18.977 800.0 29833.0 25 0 3321.9 -1 0 41 790.5941191678351 3158.34737080494 4 791.0940429568291 MULTI CID FTMS 0 0 0 3781 74517.3984375 0.7445152628631309 -1 0.0574169158935546 5 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.268 26099.1 0.3799999952316284 781 3003 3781 DOHH2_400M_050219_1,3786 DOHH2_400M_050219_1,3786, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3788 18.987 402.0 205900.0 25 0 21643.0 + 5161 DIKKTNESL 9 109 524.2878678179796 1046.5611827027592 2 524.2881957888603 MULTI CID FTMS 0 0 0 3787 198311.890625 0.337783967486623 -2 0.092538833618164 1 Unmodified _DIKKTNESL_ ENSG00000189057|ENST00000343597|FAM111B;nc|ENSG00000189057|Q6SJ93-2|FAM111B 47.594388314883695 0.0456443387682827 1 {I|L}DK[Q{I|L}][KC]S 8 7 61.406 0.0 0.0 5.8674 0.0 0.0 0.0 128.07190881900627 128.07190881900627 32.06576089017268 0.0 0.0 0.0 0 1.110924374808178 2.0 1.305462187404089 0.3252574989159953 {I|L}DK[Q{I|L}][KC]S 5.8674 - 313 + 1 2.268 69068.3 1.0 782 3004 3787 DOHH2_400M_050219_1,3788 DOHH2_400M_050219_1,3788,DIKKTNESL True True DIKKTNESL 18.987019 524.28819578886 2822171.25 3787.0 ENSG00000189057|ENST00000343597|FAM111B;;nc|ENSG00000189057|Q6SJ93-2|FAM111B 2.810551563898722 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3789 19.0 761.0 178790.0 25 0 9625.4 + 5156 DIKKGHVL 8 135 455.2793559789284 0 455.2793456912041 PEAK CID FTMS 0 0 0 3787 143454.140625 1.0 0 0.0 2 Unmodified _DIKKGHVL_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-8|SYNE2;nc|ENSG00000054654|Q8WXH0-9|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 43.85829265575387 0.1228905615125388 1 DKP 3 6 18.461 0.0 0.0 2.0319 0.0 0.0 113.08320921306375 452.2498262994751 565.3330355125388 0.0 0.0 0.0 0.0 0 0.566901560044258 0.0 0.5 0.0 DKP 2.0319 - 216 + 1 2.268 109245.7 1.0 783 3004 3787 DOHH2_400M_050219_1,3789 DOHH2_400M_050219_1,3789,DIKKGHVL True True DIKKGHVL 19.00018 455.279345691204 587952.4375 3787.0 nc|ENSG00000054654|Q8WXH0|SYNE2;;nc|ENSG00000054654|Q8WXH0-9|SYNE2;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0-8|SYNE2 4.132522344589233 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3790 19.014 800.0 127470.0 25 0 9833.5 + 28348 PSDPKQYRY 9 107 577.2858296307032 1152.5571063282064 2 577.2849609255791 MULTI CID FTMS 0 0 0 3787 99291.7734375 0.8567945070650416 -1 0.0351219177246093 3 Unmodified _PSDPKQYRY_ ENSG00000078618|ENST00000352171|NRDC;ENST00000491410.1_1_1:52305873-52344287:-|nuORF;nc|ENSG00000078618|O43847-2|NRDC 39.94969957227396 0.0757326808254658 1 PSDPKQ[YR]Y 9 0 + 72.841 0.0 0.0 6.32 6.32 87.432 0.0 0.0 0.0 60.622600263328295 3.4678748622465605 3.4678748622465605 8.573324964312675 0 1.0 1.3979400086720375 0.0 0.4247425010840047 + + PSDPKQ[YR]Y;PSDPKQ[C(Carbamidomethyl (C))K]PP;PSDPK[AG][YR]Y;PSDPK[WE]TPP;PSDPK[AG][C(Carbamidomethyl (C))K]PP 6.32;5.5761;5.521;4.901;4.781 +;-;-;-;- + 120 + 1 2.268 83197.6 0.5099999904632568 784 3004 3787 DOHH2_400M_050219_1,3790 DOHH2_400M_050219_1,3790,PSDPKQYRY True True PSDPKQYRY 19.014011 577.284960925579 2625007.8125 3787.0 nc|ENSG00000078618|O43847-2|NRDC;;ENST00000491410.1_1_1:52305873-52344287:-|nuORF;;ENSG00000078618|ENST00000352171|NRDC 6.333705584208171 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3792 19.021 180.0 512680.0 25 0 46119.0 + 8556 ETKLRKEEL 9 111 382.55570636213474 1144.6452896866042 3 382.5555602908134 MULTI CID FTMS 0 0 0 3791 223264.4375 0.571318240386437 2 -0.1078987121582031 1 Unmodified _ETKLRKEEL_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358|DNMT1 15.248480904072842 0.4239247793462406 1 {M(Oxidation (M))|F}{I|L} 2 8 22.351 0.0 0.0 1.9527 0.0 0.0 866.4984176131411 0.0 866.4984176131411 0.0 6.866654986684733 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L} 1.9527 - 51 1 2.268 75637.5 1.0 785 3005 3791 DOHH2_400M_050219_1,3792 DOHH2_400M_050219_1,3792,ETKLRKEEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3793 19.035 800.0 109460.0 25 0 10393.0 + 25813 VEKAPQETY 9 136 532.2634500671417 1062.5123472010832 2 532.7671386599541 MULTI CID FTMS 0 0 0 3791 101499.359375 0.9549997625716824 -1 0.0367450714111328 2 Unmodified _NKSPRSDPY_ ENSG00000100764|ENST00000261303|PSMC1;ENST00000396338.3_1_12:18845807-18846413:+|nuORF;nc|ENSG00000100764|P62191-2|PSMC1 7.910154910731844 0.6385446671287552 1 TY 2 8 23.469 0.0 0.0 2.2088 0.0 0.0 780.3909310407302 0.0 780.3909310407302 0.0 -0.0599911116710671 -0.0599911116710671 0.0 0 0.0 0.0 0.25 0.0 TY 2.2088 - 632 + 1 2.268 73655.8 0.4600000083446502 786 3005 3791 DOHH2_400M_050219_1,3793 DOHH2_400M_050219_1,3793,NKSPRSDPY False False VEKAPQETY 19.035212 532.767138659954 843662.25 3791.0 ENSG00000100764|ENST00000261303|PSMC1;;ENST00000396338.3_1_12:18845807-18846413:+|nuORF;;nc|ENSG00000100764|P62191-2|PSMC1 6.505145231882731 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3794 19.039 186.0 273460.0 25 0 22272.0 + 2713 ATEYKNEEY 9 85 573.7515747693075 0 573.7516357302666 PEAK CID FTMS 0 0 0 3791 187466.109375 1.0 0 0.0 3 Unmodified _ATEYKNEEY_ ENSG00000083896|ENST00000344157|YTHDC1;nc|ENSG00000083896|Q96MU7-2|YTHDC1 39.94969957227396 0.061964645358372 1 EY 2 7 13.901 0.0 0.0 1.2135 0.0 0.0 172.08638820873358 678.2733858697874 850.359774078521 0.0 0.0 0.0 0.0 0 0.5941876774005248 0.0 0.0 0.0 + EY 1.2135 + + 52 + 1 2.268 42647.2 1.0 787 3005 3791 DOHH2_400M_050219_1,3794 DOHH2_400M_050219_1,3794,ATEYKNEEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3795 19.053 800.0 243580.0 25 0 23908.0 + -1 KPCLLLDPL 9 130 534.8115017786805 1067.608450624161 2 534.8117553591728 MULTI CID FTMS 0 0 0 3791 130088.859375 0.1583439039375139 -3 0.1292839050292968 4 Carbamidomethyl (C) _KPC(Carbamidomethyl (C))LLLDPL_ REV__ENST00000478182.5_1_3:119246651-119248702:-|nuORF 26.88365393820708 0.1891292719743517 1 KPTGAAR[PS]A{I|L} 11 -1 + 72.587 0.0 0.0 6.799 6.799 87.07 0.0 0.0 0.0 52.665124466315405 3.570557681222894 3.570557681222894 6.575773191777927 0 2.4604093769761874 0.0 0.7742275032520141 0.0 KPTGAAR[PS]A{I|L};KPTQAR[PS]A{I|L};KPTGAAR[{I|L}T]GP;KPTQAR[{I|L}T]GP;{I|L}{[NV]|[RG]}GAAR[PS]A{I|L};KPT[KP][WQ]A{I|L};{I|L}{[NV]|[RG]}QAR[PS]A{I|L};{I|L}{[NV]|[RG]}GAAR[{I|L}T]GP;{I|L}{[NV]|[RG]}QAR[{I|L}T]GP;[KP][NP]{M(Oxidation (M))|F}[{I|L}A]GPK 6.799;6.1831;6.0217;5.4058;3.8079;3.4624;3.192;3.0306;2.4147;1.6974 -;-;-;-;-;-;-;-;-;- 715 + 1 2.268 153001.9 0.5600000023841858 788 3005 3791 DOHH2_400M_050219_1,3795 DOHH2_400M_050219_1,3795,KPCLLLDPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3796 19.066 800.0 148410.0 25 0 12741.0 -1 PMARICSTW 9 115 561.2668675302923 1120.5191821273845 2 561.2669555544853 MULTI CID FTMS 0 0 0 3791 121380.8828125 0.7212347761662399 -1 0.0367450714111328 5 Carbamidomethyl (C) _PMARIC(Carbamidomethyl (C))STW_ ENST00000296440.10_1_3:48465848-48465944:-|nuORF 15.847184025352805 0.4077185912009129 1 MPAP 4 -1 56.67 0.0 0.0 5.0575 0.0 0.0 0.0 721.3107393854124 721.3107393854124 35.70107520596089 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 MPAP 5.0575 - 246 + 1 2.268 95645.7 0.5400000214576721 789 3005 3791 DOHH2_400M_050219_1,3796 DOHH2_400M_050219_1,3796,PMARICSTW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3797 19.076 557.0 142020.0 25 0 25082.0 14716 IKESTSSK 8 115 440.2426753552901 878.4707977773802 2 440.2423889040947 MULTI CID FTMS 0 0 0 3791 99142.5859375 1.0 0 0.0 6 Unmodified _IKESTSSK_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 7.910154910731844 0.7763180056447161 1 {I|L} 1 7 12.474 0.0 0.0 1.42 0.0 0.0 747.3760539803084 0.0 747.3760539803084 0.0 1.8783180698044253 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.42 + + 21 + 1 2.268 64723.7 1.0 790 3005 3791 DOHH2_400M_050219_1,3797 DOHH2_400M_050219_1,3797,IKESTSSK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3798 19.09 800.0 109110.0 25 0 11947.0 + 16572 KDIENQYETQ 10 98 634.2940272451164 1266.5735015570326 2 634.2947265505791 MULTI CID FTMS 0 0 0 3791 93420.5234375 0.5451379176032038 -1 0.0367450714111328 7 Unmodified _KDIENQYETQ_ CON__P35527;ENSG00000171403|ENST00000246662|KRT9 104.48436234954404 0.0061796757808163 1 {NN|[MP]|[D{I|L}]|[EV]}KENQYETQ 10 2 + 79.065 0.0 0.0 6.2424 6.2424 81.066 0.0 0.0 0.0 1.6588802846317492 39.88865231114374 1.6588802846317492 2.3722178024754044 0 0.8494850021680094 0.958607314841775 0.805462187404089 1.579689690656103 {NN|[MP]|[D{I|L}]|[EV]}KENQYETQ;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ENQYETQ;[AG]TE[Q{I|L}]QYETQ;{NN|[MP]|[D{I|L}]|[EV]}KEN[AG]YETQ;{NN|[MP]|[D{I|L}]|[EV]}KEGGQYETQ;{NN|[MP]|[D{I|L}]|[EV]}KYAHYETQ;[QT]E[Q{I|L}]QYETQ;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EN[AG]YETQ;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EGGQYETQ;{[ET]|[MV]}Q[Q{I|L}]QYETQ 6.2424;6.0551;5.5957;5.5188;5.5188;5.4269;5.3788;5.3316;5.3316;5.2398 -;+;-;-;-;-;-;-;-;- + 3566 1 2.268 72362.0 0.4799999892711639 791 3005 3791 DOHH2_400M_050219_1,3798 DOHH2_400M_050219_1,3798,KDIENQYETQ True True KDIENQYETQ 19.090098 634.294726550579 851598.5625 3791.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 6.623094399770101 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 3800 19.096 194.0 289190.0 25 0 30839.0 + 17584 KPTAAFHLL 9 77 499.2930196942723 996.5714864553446 2 499.2929565310478 MULTI CID FTMS 0 0 0 3799 244070.796875 0.0018621026286956 54 -1.2560100555419922 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 11.640296217721598 0.521594087909532 1 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3516329400999 667.3516329400999 30.026975159433533 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 65 + 1 2.268 50788.1 1.0 792 3006 3799 DOHH2_400M_050219_1,3800 DOHH2_400M_050219_1,3800,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3801 19.11 800.0 74746.0 25 0 5981.7 + + 30046 MPPAPPPPPPQN 12 84 628.3105356312436 1254.6065183292872 2 628.3089477419853 MULTI CID FTMS 0 0 0 3799 78711.796875 0.8679223535419632 1 -0.031829833984375 2 Unmodified _QTVMPMIPQNP_ ENST00000413725.5_1_11:64533292-64535069:-|nuORF;ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-7|SF1 12.240655878213236 0.7805268987462184 1 {[HG]|PP}A{M(Oxidation (M))|F}PPPPP[QP]N 12 -1 {[HG]|PP}A{M(Oxidation (M))|F}PP + + 37.44 13.773 2.2716 2.9842 2.9842 50.432 0.0 0.0 0.0 0.0 23.667053245199625 0.0 0.0 0 1.5 0.0 0.0 0.8494850021680094 {[HG]|PP}A{M(Oxidation (M))|F}PPPPP[QP]N 2.9842 - 422 + 1 2.268 50646.9 0.4799999892711639 793 3006 3799 DOHH2_400M_050219_1,3801 DOHH2_400M_050219_1,3801,QTVMPMIPQNP False False MPPAPPPPPPQN 19.110181 628.308947741985 3221961.75 3799.0 ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;ENSG00000168066|ENST00000377390|SF1;;nc|ENSG00000168066|Q15637-7|SF1 5.540103912353516 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3802 19.113 142.0 337810.0 25 0 30107.0 + 18013 KSDVNKEYY 9 87 573.2770428921228 1144.5395328510456 2 573.2770873904228 MULTI CID FTMS 0 0 0 3799 240658.96875 0.7864865750882962 -1 0.0760688781738281 3 Unmodified _KSDVNKEYY_ ENSG00000086589|ENST00000199814|RBM22;ENST00000521248.5_1_5:150076301-150080613:-|nuORF;ENST00000521594.1_1_5:150076301-150080167:-|nuORF;ENST00000522469.5_1_5:150075051-150080604:-|nuORF;nc|ENSG00000086589|Q9NW64-2|RBM22 30.7034409873982 0.1405282614900322 1 RVEYY 5 5 32.652 0.0 0.0 2.8528 0.0 0.0 416.1744862287125 0.0 416.1744862287125 0.0 17.1669877129645 0.0 0.0 0 0.5 0.0 0.5 0.0 RVEYY 2.8528 - 412 1 2.268 38841.8 1.0 794 3006 3799 DOHH2_400M_050219_1,3802 DOHH2_400M_050219_1,3802,KSDVNKEYY False True KSDVNKEYY 19.113037 573.277087390423 1503093.875 3799.0 ENST00000522469.5_1_5:150075051-150080604:-|nuORF;;ENSG00000086589|ENST00000199814|RBM22;;nc|ENSG00000086589|Q9NW64-2|RBM22;;ENST00000521248.5_1_5:150076301-150080613:-|nuORF;;ENST00000521594.1_1_5:150076301-150080167:-|nuORF 3.3487566312154136 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3803 19.122 503.0 281470.0 25 0 18553.0 + 30537 RELPGHTGY 9 119 515.2594882330824 1028.504423532965 2 515.2593871951103 MULTI CID FTMS 0 0 0 3799 172094.984375 0.5907732014668062 -7 0.2921409606933594 4 Unmodified _RELPGHTGY_ ENSG00000114450|ENST00000232564|GNB4;ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000172354|P62879-2|GNB2 83.42873516780209 0.0166860047644719 1 {[RE]|[WV]}{I|L}PGHTGY 9 0 + 82.304 0.0 0.0 8.0023 8.0023 95.536 0.0 0.0 0.0 11.751736484954378 65.4735130209915 11.751736484954378 15.796896906561033 0 2.1747425010840047 0.0 0.7614393726401688 0.6109243748081782 + + {[RE]|[WV]}{I|L}PGHTGY;{[RE]|[WV]}{I|L}PGHGTY;{[RE]|[WV]}{I|L}[YQ]TGY;{[RE]|[WV]}{I|L}H[PG]TGY;[EP][R{I|L}]GHTGY;[QA][KA]PGHTGY;{[RE]|[WV]}{I|L}[YQ]GTY;{[RE]|[WV]}{I|L}H[PG]GTY;[EP][R{I|L}]GHGTY;[{I|L}T]R[PG]HEGY 8.0023;6.4664;6.1013;5.8034;5.5299;4.8127;4.5654;4.2675;3.994;3.5152 +;-;-;-;-;-;-;-;-;- + 455 1 2.268 112125.4 1.0 795 3006 3799 DOHH2_400M_050219_1,3803 DOHH2_400M_050219_1,3803,RELPGHTGY True True RELPGHTGY 19.12192 515.25938719511 4375553.0 3799.0 ENSG00000172354|ENST00000303210|GNB2;;ENSG00000114450|ENST00000232564|GNB4;;nc|ENSG00000172354|P62879-2|GNB2 8.673583189646402 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3805 19.132 349.0 369380.0 25 0 57354.0 + 29178 QGCRYRVTY 9 133 382.5207523538214 1144.5404276616644 3 382.5205566287041 MULTI CID FTMS 0 0 0 3804 115779.3515625 0.8234841641732061 1 -0.0319652557373046 1 Unmodified _QGCRYRVTY_ REV__ENSG00000128059|ENST00000264220|PPAT;REV__ENST00000425339.2_1_4:57266934-57267072:-|nuORF 5.296884461304476 0.7297726132274777 1 Y 1 -1 15.485 0.0 0.0 1.3529 0.0 0.0 963.4662069358816 0.0 963.4662069358816 0.0 4.515449934959719 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3529 + + 73 + 1 2.268 103228.1 1.0 796 3007 3804 DOHH2_400M_050219_1,3805 DOHH2_400M_050219_1,3805,QGCRYRVTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3806 19.14 442.0 149710.0 25 0 14110.0 + 6041 DSDYHQEAY 9 103 564.2173614601408 1126.4201699870814 2 564.2171508669853 MULTI CID FTMS 0 0 0 3804 141028.53125 0.4468701012789762 -4 0.1797657012939453 2 Unmodified _DSDYHQEAY_ ENSG00000108788|ENST00000435881|MLX;ENST00000585403.5_1_17:40719142-40721608:+|nuORF;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;ENST00000590050.5_1_17:40719112-40721521:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 62.57269311338072 0.0246576765497938 1 {[WN]|[YH]}DQ{[DS]|[MA]|[CV]|TT}EAY 9 5 + 52.386 0.0 0.0 4.6507 4.6507 73.843 0.0 0.0 0.0 2.4544528147649203 2.243012119929091 2.243012119929091 1.288624837399297 0 0.5 1.2218487496163564 0.4247425010840047 0.3807196863200844 {[WN]|[YH]}DQ{[DS]|[MA]|[CV]|TT}EAY;{[WN]|[YH]}DQEASDY;{[DS]|[MA]|[CV]|TT}D{[WN]|[YH]}QEAY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AHYDMAY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HYDAMAY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{[C(Carbamidomethyl (C))E]|[WC]}QEAY;{[WN]|[YH]}D[AG]{[DS]|[MA]|[CV]|TT}EAY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HAYDMAY;{[WN]|[YH]}D[AG]EASDY;{[WN]|[YH]}DAADASDY 4.6507;4.5363;4.4328;3.9241;3.9241;3.8391;3.8332;3.8131;3.7188;3.6485 -;-;+;-;-;-;-;-;-;- + 716 1 2.268 54944.3 1.0 797 3007 3804 DOHH2_400M_050219_1,3806 DOHH2_400M_050219_1,3806,DSDYHQEAY True True DSDYHQEAY 19.140049 564.217150866985 1625885.375 3804.0 ENST00000585403.5_1_17:40719142-40721608:+|nuORF;;ENST00000590050.5_1_17:40719112-40721521:+|nuORF;;nc|ENSG00000108788|Q9UH92|MLX;;nc|ENSG00000108788|Q9UH92-2|MLX;;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;;ENSG00000108788|ENST00000435881|MLX 5.947881539662679 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3807 19.154 800.0 165590.0 25 0 25335.0 + 24677 MMDPNSTQRY 10 106 629.7626712186919 1257.5107895041838 2 629.7630493044853 MULTI CID FTMS 0 0 0 3804 134334.140625 0.502802985031681 -5 0.2371826171875 3 Oxidation (M) _MM(Oxidation (M))DPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 65.47368725323818 0.0222277162070287 1 M{M(Oxidation (M))|F}DPNSTQRY 10 0 + 93.793 0.0 0.0 7.4586 7.4586 90.718 0.0 0.0 0.0 73.35979084976366 11.505149978319906 11.505149978319906 9.164539485499247 0 1.0 0.0 0.805462187404089 1.1861818737241734 + + M{M(Oxidation (M))|F}DPNSTQRY;M{M(Oxidation (M))|F}DPGGSTQRY;M{M(Oxidation (M))|F}DPNST[AG]RY;M{M(Oxidation (M))|F}DPNST{[QV]|[N{I|L}]|[RA]|[KV]}GY;M{M(Oxidation (M))|F}DPGGST[AG]RY;M{M(Oxidation (M))|F}DPGGST{[QV]|[N{I|L}]|[RA]|[KV]}GY;M{M(Oxidation (M))|F}DPN[C(Carbamidomethyl (C))R]RY;M{M(Oxidation (M))|F}YYSTQRY;M{M(Oxidation (M))|F}DPGG[C(Carbamidomethyl (C))R]RY;M{M(Oxidation (M))|F}YYST[AG]RY 7.4586;6.7298;6.7298;6.111;6.0039;5.3851;5.3847;5.1849;4.6524;4.4526 +;-;-;-;-;-;-;-;-;- + 1045 + 1 2.268 100323.8 0.5899999737739563 798 3007 3804 DOHH2_400M_050219_1,3807 DOHH2_400M_050219_1,3807,MMDPNSTQRY True False MMDPNSTQRY 19.153887 629.763049304485 1443478.125 3804.0 ENSG00000124571|ENST00000265351|XPO5 6.955527861913045 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3810 19.166 295.0 193670.0 25 0 17815.0 + 4792 DENPDKSTL 9 93 509.7378846885191 1017.4612164438382 2 509.7377807497978 MULTI CID FTMS 0 0 0 3809 124737.875 0.4584135328743852 -7 0.2730350494384765 1 Unmodified _DENPDKSTL_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 29.84058131909904 0.1515068451768857 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NPD[KS]T{I|L} 9 0 + 36.565 0.0 0.0 3.5937 3.5937 80.337 0.0 0.0 0.0 20.08146596900417 3.109112683611535 3.109112683611535 9.208187539523756 0 0.8494850021680094 0.0 0.4247425010840047 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NPD[KS]T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGPD[KS]T{I|L};[C(Carbamidomethyl (C))C]{I|L}[{I|L}T]S[PA][PG];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TP]RRNM;[C(Carbamidomethyl (C))C]{I|L}H[K{I|L}]NM;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YY[KS]T{I|L};[C(Carbamidomethyl (C))C]{I|L}[TP][NP]T{I|L} 3.5937;2.6887;0.82454;0.75489;0.65072;0.5751;0.37303 +;-;-;-;-;-;- + 182 + 1 2.268 51232.0 1.0 799 3009 3809 DOHH2_400M_050219_1,3810 DOHH2_400M_050219_1,3810,DENPDKSTL False True DENPDKSTL 19.165707 509.737780749798 3058633.25 3809.0 ENSG00000114346|ENST00000392692|ECT2;;nc|ENSG00000114346|Q9H8V3-3|ECT2;;nc|ENSG00000114346|Q9H8V3-4|ECT2;;nc|ENSG00000114346|Q9H8V3-2|ECT2 7.187326272328694 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3811 19.169 144.0 435600.0 25 0 42147.0 + 45515 YTSPGTQKY 9 87 522.7528664487098 1043.4911799642196 2 522.7535278201103 MULTI CID FTMS 0 0 0 3809 453174.96875 1.0 0 0.0 2 Unmodified _YTSPGTQKY_ ENSG00000064313|ENST00000378164|TAF2 43.77239144664712 0.0547478964384323 1 YTSPG[QT]KY 9 0 + 73.394 0.0 0.0 7.0336 7.0336 93.667 0.0 0.0 0.0 38.51219677964764 10.875912339897198 10.875912339897198 15.45880017344075 0 0.3807196863200844 2.0 0.8494850021680094 0.0 + + YTSPG[QT]KY;YTS{[VA]|[{I|L}G]}[Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]};YT[HM]K{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]};YT[HM]K[PG][NP];[DN]{I|L}[VP]GPS[{M(Oxidation (M))|F}V];[VG]{[DA]|[EG]}[VP]GPS[{M(Oxidation (M))|F}V];[PS]{[SA]|[TG]}[VP]GPS[{M(Oxidation (M))|F}V];[PS][QA]K[HM][{M(Oxidation (M))|F}V];[DN]{I|L}[RP]P[W{M(Oxidation (M))|F}];[VG]{[DA]|[EG]}[RP]P[W{M(Oxidation (M))|F}] 7.0336;5.5521;4.2453;3.1758;2.7751;2.4843;2.0271;1.6112;1.4262;1.1261 +;-;-;-;-;-;-;-;-;- + 335 + 1 2.268 53860.8 1.0 800 3009 3809 DOHH2_400M_050219_1,3811 DOHH2_400M_050219_1,3811,YTSPGTQKY True True YTSPGTQKY 19.168605 522.75352782011 2844959.0 3809.0 ENSG00000064313|ENST00000378164|TAF2 8.633079687754313 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3812 19.182 800.0 86984.0 25 0 6896.3 + 45498 YTQQATQSY 9 109 545.245630193106 1088.4767074530118 2 545.2446166872978 MULTI CID FTMS 0 0 0 3809 92400.1875 0.9679023726048308 3 -0.07720947265625 3 Unmodified _YTQQATQSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 22.736283301280096 0.2418982879461534 1 SY 2 7 21.013 0.0 0.0 1.9305 0.0 0.0 820.3708247399244 0.0 820.3708247399244 0.0 5.159576138109863 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + SY 1.9305 + + 479 + 1 2.268 59546.8 0.5 801 3009 3809 DOHH2_400M_050219_1,3812 DOHH2_400M_050219_1,3812,YTQQATQSY False True YTQQATQSY 19.182439 545.244616687298 565729.9375 3809.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 3.8794641494750977 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3815 19.193 229.0 258120.0 25 0 16303.0 + 677 AEMNRGSNEWK 11 83 441.20327505233087 1320.5879957571926 3 441.2035400271416 MULTI CID FTMS 0 0 0 3814 162493.484375 0.486743568993753 -1 0.0041828155517578 1 Unmodified _AEMNRGSNEWK_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENST00000568339.5_1_16:85839106-85839475:+|nuORF 24.99096001346401 0.505407273373304 1 AE 2 9 49.024 0.0 0.0 3.7123 0.0 0.0 0.0 1117.4850758816283 1117.4850758816283 27.96597803923873 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 + AE 3.7123 + + 329 + 1 2.268 52434.2 1.0 802 3011 3814 DOHH2_400M_050219_1,3815 DOHH2_400M_050219_1,3815,AEMNRGSNEWK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3816 19.207 800.0 118270.0 25 0 12916.0 + 678 AEMNRGSNEWK 11 96 661.3006700106789 1320.5867870881575 2 661.3011962771416 MULTI CID FTMS 0 0 0 3814 95091.84375 0.6754738261964123 1 -0.0483417510986328 2 Unmodified _AEMNRGSNEWK_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENST00000568339.5_1_16:85839106-85839475:+|nuORF 36.39500950444726 0.267929034476522 1 D[RN][C(Carbamidomethyl (C))D]AEWK 9 6 42.157 0.0 0.0 3.1923 0.0 0.0 128.09515578437657 0.0 128.09515578437657 0.0 24.19855913805776 0.0 0.0 0 1.305462187404089 0.0 0.2614393726401688 0.0 D[RN][C(Carbamidomethyl (C))D]AEWK 3.1923 - 606 1 2.268 74930.4 0.5699999928474426 803 3011 3814 DOHH2_400M_050219_1,3816 DOHH2_400M_050219_1,3816,AEMNRGSNEWK False True AEMNRGSNEWK 19.207332 661.301196277142 2124748.875 3814.0 ENST00000568339.5_1_16:85839106-85839475:+|nuORF;;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;;ENSG00000131143|ENST00000253452|COX4I1;;ENST00000564648.1_1_16:85839106-85840477:+|nuORF 5.678496996561687 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3817 19.221 800.0 187440.0 25 0 19802.0 + 17526 KPLLVPEM 8 117 463.7744997110454 925.5344464888908 2 463.7747375369072 MULTI CID FTMS 0 0 0 3814 143696.125 0.720029475905436 -1 0.0041828155517578 3 Unmodified _KPLLVPEM_ REV__ENSG00000196498|ENST00000405201|NCOR2;REV__nc|ENSG00000196498|Q9Y618-2|NCOR2;REV__nc|ENSG00000196498|Q9Y618-4|NCOR2;REV__nc|ENSG00000196498|Q9Y618-5|NCOR2 24.67388899826682 0.525179942228231 1 KPTG 4 -1 46.102 0.0 0.0 4.9811 0.0 0.0 0.0 539.2956637018186 539.2956637018186 22.914478256039672 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.805462187404089 0.0 KPTG 4.9811 - 89 + 1 2.268 119322.3 0.5600000023841858 804 3011 3814 DOHH2_400M_050219_1,3817 DOHH2_400M_050219_1,3817,KPLLVPEM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3818 19.235 800.0 170880.0 25 0 27966.0 + 32762 SEDPSHPSM 9 129 493.69780939316 985.38106585312 2 493.6977722048759 MULTI CID FTMS 0 0 0 3814 85849.046875 0.3326123947438134 -9 0.3019027709960937 4 Unmodified _SEDPSHPSM_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 52.268347100219714 0.0353964759249114 1 {[ES]|[DT]|[{I|L}C]}DPSHPSM 9 0 + 40.65 0.0 0.0 4.1253 4.1253 73.48 0.0 0.0 0.0 7.147642715192504 2.3957751657678727 2.3957751657678727 2.3957751657678727 0 0.7742275032520141 0.0 0.2887254899964357 0.0 + + {[ES]|[DT]|[{I|L}C]}DPSHPSM;{[ES]|[DT]|[{I|L}C]}DPSH[WE];{[ES]|[DT]|[{I|L}C]}D[HV]D[PG]M;{[ES]|[DT]|[{I|L}C]}[W{M(Oxidation (M))|F}]D[TA]M;{[ES]|[DT]|[{I|L}C]}D[W{M(Oxidation (M))|F}][TA]M;{[ES]|[DT]|[{I|L}C]}D[HV]D{[MG]|[TS]}P;{[ES]|[DT]|[{I|L}C]}[Y{I|L}]C(Carbamidomethyl (C))PSM;{[ES]|[DT]|[{I|L}C]}DP{[ET]|[MV]}[DP]P;{[ES]|[DT]|[{I|L}C]}[Y{I|L}]C(Carbamidomethyl (C))[WE];{[ES]|[DT]|[{I|L}C]}[Y{I|L}][CG]PSM 4.1253;3.8822;1.7327;1.7095;1.6331;1.2247;1.1549;1.1263;0.91867;0.21491 +;-;-;-;-;-;-;-;-;- + 336 + 1 2.268 107980.4 0.449999988079071 805 3011 3814 DOHH2_400M_050219_1,3818 DOHH2_400M_050219_1,3818,SEDPSHPSM True True SEDPSHPSM 19.234961 493.697772204876 3017263.0 3814.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 8.09014860788981 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3820 19.242 249.0 335480.0 25 0 27683.0 24306 MDDQEKRSL 9 104 374.5130937747558 1120.5174519244674 3 374.5134460330009 MULTI CID FTMS 0 0 0 3819 101454.9765625 0.2454368961617893 6 -0.0902042388916015 1 Unmodified _MDDQEKRSL_ ENSG00000149311|ENST00000675843|ATM;ENST00000524792.5_1_11:108158320-108236232:+|nuORF 6.2057823575117 0.6980434486082533 1 MPA{I|L} 4 7 31.938 0.0 0.0 2.8503 0.0 0.0 0.0 705.2830294244749 705.2830294244749 19.948500216800937 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MPA{I|L} 2.8503 - 42 + 1 2.268 75191.9 1.0 806 3012 3819 DOHH2_400M_050219_1,3820 DOHH2_400M_050219_1,3820,MDDQEKRSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3821 19.245 137.0 374640.0 25 0 29104.0 -1 ESATITCLV 9 91 497.24962202735554 992.4846911215112 2 497.2495300173759 MULTI CID FTMS 0 0 0 3819 383698.03125 0.328119613553154 -9 0.2928276062011719 2 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 57.47134341890925 0.0274820932774257 1 {[ES]|[DT]|[{I|L}C]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 + 53.968 0.0 0.0 5.4376 5.4376 90.035 0.0 0.0 0.0 25.84630327004689 9.87765543582988 9.87765543582988 25.032511901381863 0 1.1861818737241734 0.0 1.0044321917401078 0.0 {[ES]|[DT]|[{I|L}C]}ATP{I|L}T{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}ATVV[TA]{[ES]|[DT]|[{I|L}C]};[TA]DTVV[TA]{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG]P{I|L}T{M(Oxidation (M))|F}K;{[MG]|[TS]}{[CP]|[EA]}VV[TA]{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}[W{M(Oxidation (M))|F}]{I|L}[PS]K 5.4376;2.9154;2.7856;2.1257;0.58358;0.043898 -;-;-;-;-;- 184 + 1 2.268 44399.9 1.0 807 3012 3819 DOHH2_400M_050219_1,3821 DOHH2_400M_050219_1,3821,ESATITCLV False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 3823 19.26 738.0 128860.0 25 0 12362.0 + 17488 KPGERKPV 8 130 455.7779013102009 909.5412496872018 2 455.7769348025322 MULTI CID FTMS 0 0 0 3822 61712.8515625 0.5533270532882466 5 -0.0802669525146484 1 Unmodified _KPGERKPV_ ENST00000461745.5_2_3:77089448-77089580:+|nuORF 11.640296217721598 0.738950129755968 1 KPTK 4 5 40.745 0.0 0.0 4.4798 0.0 0.0 0.0 452.2098177545532 452.2098177545532 30.90204007392588 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 KPTK 4.4798 - 128 + 1 2.268 78768.5 1.0 808 3013 3822 DOHH2_400M_050219_1,3823 DOHH2_400M_050219_1,3823,KPGERKPV False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3824 19.27 558.0 205380.0 25 0 22026.0 33505 SIKAAIKAA 9 120 436.7818817967199 871.5492106602397 2 436.7819702029228 MULTI CID FTMS 0 0 0 3822 107471.15625 0.5897091961966924 -4 0.0871467590332031 2 Unmodified _SIKAAIKAA_ ENSG00000086712|ENST00000380122|TXLNG;nc|ENSG00000086712|Q9NUQ3-2|TXLNG 14.838274106304384 0.4350285940865338 1 {[TV]|[{I|L}S]}A 3 6 34.934 0.0 0.0 4.0082 0.0 0.0 0.0 597.3722267782181 597.3722267782181 10.24104976468614 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.0 0.0 {[TV]|[{I|L}S]}A 4.0082 - 339 + 1 2.268 92645.8 1.0 809 3013 3822 DOHH2_400M_050219_1,3824 DOHH2_400M_050219_1,3824,SIKAAIKAA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3825 19.284 800.0 48587.0 25 0 3979.3 + -1 QQSISDAEQRGENA 14 57 766.850491411333 1531.686429889466 2 766.8508788943291 MULTI CID FTMS 0 0 0 3822 92360.7109375 1.0 0 0.0 3 Oxidation (M) _NPDWM(Oxidation (M))IYFRQF_ P04264;ENSG00000167768|ENST00000252244|KRT1 2.735195868890462 0.8622431031272658 1 [NP]D{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}ADS{I|L}S[HT] 14 -1 + 57.048 0.0 0.0 3.7245 3.7245 76.989 0.0 0.0 0.0 3.366064123834533 38.86078308104437 3.366064123834533 6.667853209646175 0 0.3807196863200844 0.0 0.7302046884880937 0.4247425010840047 [NP]D{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}ADS{I|L}S[HT];[NP]D{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}WS{I|L}S[HT];YY{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}ADS{I|L}S[HT];YY{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}WS{I|L}S[HT];[NP]N{I|L}[Y{M(Oxidation (M))|F}][HC]S{I|L}S[HT];[NP]D{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}A[WE]S[HT];[NP]D{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}AD{[WT]|[RM]}[HT];[HT]S{I|L}[Y{M(Oxidation (M))|F}][HC]S{I|L}S[HT];YY{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}A[WE]S[HT];YY{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}AD{[WT]|[RM]}[HT] 3.7245;3.2892;3.0869;2.6533;2.1466;1.9843;1.9843;1.9601;1.6256;1.6256 -;-;-;-;-;-;-;-;-;- 273 1 2.268 36952.1 0.4399999976158142 810 3013 3822 DOHH2_400M_050219_1,3825 DOHH2_400M_050219_1,3825,NPDWMIYFRQF False False QQSISDAEQRGENA 19.283882 766.850878894329 352695.75 3822.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 7.6618452072143555 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3828 19.293 139.0 396940.0 25 0 39732.0 + -1 KPCLLLDPL 9 56 534.8115017786805 1067.608450624161 2 534.8116943240166 MULTI CID FTMS 0 0 0 3827 434214.34375 0.5285248457505791 7 -0.1645278930664062 1 Carbamidomethyl (C) _KPC(Carbamidomethyl (C))LLLDPL_ REV__ENST00000478182.5_1_3:119246651-119248702:-|nuORF 11.640296217721598 0.521594087909532 1 KPT 3 -1 39.693 0.0 0.0 3.7179 0.0 0.0 0.0 738.3902900037377 738.3902900037377 21.27636252551653 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.7179 - 20 + 1 2.268 50235.7 1.0 811 3015 3827 DOHH2_400M_050219_1,3828 DOHH2_400M_050219_1,3828,KPCLLLDPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3829 19.299 287.0 307100.0 25 0 28267.0 + 43653 YARLHPRAV 9 120 361.54580561046566 1081.615587431597 3 361.5454589724541 MULTI CID FTMS 0 0 0 3827 141313.609375 0.1276562280336748 -8 0.1660213470458984 2 Unmodified _YARLHPRAV_ ENSG00000221983|ENST00000442744|UBA52 37.97399986684836 0.0865783450051559 1 VYQ{I|L}HV 6 6 55.667 0.0 0.0 5.1466 0.0 0.0 0.0 339.1792158158995 339.1792158158995 44.82946674426056 0.0 0.0 0.0 0 1.3098943791441968 0.0 0.0 0.3807196863200844 VYQ{I|L}HV 5.1466 - 232 + 1 2.268 75841.4 1.0 812 3015 3827 DOHH2_400M_050219_1,3829 DOHH2_400M_050219_1,3829,YARLHPRAV True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3831 19.315 800.0 123030.0 25 0 10621.0 + 7214 EEQVARESY 9 111 555.7569145481876 1109.4992761631752 2 555.7570678591728 MULTI CID FTMS 0 0 0 3830 146825.921875 1.0 0 0.0 1 Unmodified _EEQVARESY_ ENSG00000068308|ENST00000376488|OTUD5;nc|ENSG00000068308|Q96G74-2|OTUD5;nc|ENSG00000068308|Q96G74-3|OTUD5;nc|ENSG00000068308|Q96G74-4|OTUD5;nc|ENSG00000068308|Q96G74|OTUD5 86.33184430468982 0.0159826143231117 1 EEQVARESY 9 0 + 78.183 0.0 0.0 7.0467 7.0467 90.912 0.0 0.0 0.0 45.31234684152074 2.6918915978420586 2.6918915978420586 9.208187539523747 0 1.4049471895720984 1.5228787452803376 1.0994850021680094 0.3807196863200844 + + EEQVARESY;EE[AG]VARESY;[DP]QVNAVQ[HC];[AG][DP]VNAVQ[HC];EEQ[KQ][QA]SY;[DP]QVGGAVQ[HC];[DP]QVNAV[AG][HC];[AG][DP]VNAV[AG][HC];[AG][DP]VGGAVQ[HC];EEQVY[WE]K 7.0467;6.2168;5.6385;5.5714;4.998;4.8125;4.8125;4.7486;4.7486;4.5837 +;-;-;-;-;-;-;-;-;- + 780 + 1 2.268 81307.7 0.5400000214576721 813 3016 3830 DOHH2_400M_050219_1,3831 DOHH2_400M_050219_1,3831,EEQVARESY True True EEQVARESY 19.314932 555.757067859173 635257.8125 3830.0 ENSG00000068308|ENST00000376488|OTUD5;;nc|ENSG00000068308|Q96G74-3|OTUD5;;nc|ENSG00000068308|Q96G74|OTUD5;;nc|ENSG00000068308|Q96G74-2|OTUD5;;nc|ENSG00000068308|Q96G74-4|OTUD5 8.294479688008627 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3832 19.321 343.0 202210.0 25 0 23545.0 + 16014 ITESNMKSRY 10 102 410.2042615020631 1227.5909551063892 3 410.2041503787041 MULTI CID FTMS 0 0 0 3830 113706.6171875 0.6424381123864038 -4 0.0635738372802734 2 Unmodified _ITESNMKSRY_ ENSG00000166483|ENST00000450114|WEE1;ENST00000524549.1_1_11:9597437-9598815:+|nuORF;nc|ENSG00000166483|P30291-2|WEE1 47.7319792270244 0.0934623409360514 1 {I|L}TESNMKSRY 10 0 + 87.268 0.0 0.0 7.1089 7.1089 90.368 0.0 0.0 0.0 71.07036339272028 1.9382002601611248 1.9382002601611248 9.164539485499262 0 0.2742275032520141 1.3979400086720375 0.9247425010840048 0.8494850021680094 + + {I|L}TESNMKSRY;{I|L}TESGGMKSRY;[RH]MKMNSE[VP];[RH]MKMNS[DP]{I|L};[RH]MKMGGSE[VP];{I|L}[WM]NMKSRY;[RH]MKMGGS[DP]{I|L};[QA][QP]KMNSE[VP];{I|L}[WM]GGMKSRY;[QA][QP]KMNS[DP]{I|L} 7.1089;6.3624;4.7763;4.1456;4.0297;3.4244;3.399;3.1814;2.6742;2.5507 +;-;-;-;-;-;-;-;-;- + 272 + 1 2.268 61076.2 1.0 814 3016 3830 DOHH2_400M_050219_1,3832 DOHH2_400M_050219_1,3832,ITESNMKSRY True True ITESNMKSRY 19.321129 410.204150378704 1693944.75 3830.0 nc|ENSG00000166483|P30291-2|WEE1;;ENSG00000166483|ENST00000450114|WEE1;;ENST00000524549.1_1_11:9597437-9598815:+|nuORF 6.09843095143636 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3835 19.342 800.0 136020.0 25 0 22134.0 + 10488 FTSGEHTNY 9 121 528.2258225544002 1054.4370921756004 2 528.2258788943291 MULTI CID FTMS 0 0 0 3834 76121.4296875 0.8681596255476148 1 -0.0163688659667968 1 Unmodified _FTSGEHTNY_ ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 34.40172386719151 0.1061884637610825 1 WSTE 4 7 35.767 0.0 0.0 3.3921 0.0 0.0 533.2225819318375 0.0 533.2225819318375 0.0 21.28603502440253 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 WSTE 3.3921 - 207 1 2.268 89592.4 0.4600000083446502 815 3018 3834 DOHH2_400M_050219_1,3835 DOHH2_400M_050219_1,3835,FTSGEHTNY True True FTSGEHTNY 19.341561 528.225878894329 458535.75 3834.0 ENSG00000119912|ENST00000265986|IDE;;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 5.731658140818278 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3838 19.362 800.0 12990.0 25 0 863.23 -1 0 32 977.4168630035024 2929.228759610707 3 977.7510864138604 MULTI CID FTMS 0 0 0 3837 30423.677734375 0.1028941492262522 -3 0.0244903564453125 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.268 15743.8 0.3799999952316284 816 3020 3837 DOHH2_400M_050219_1,3838 DOHH2_400M_050219_1,3838, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3839 19.374 713.0 205130.0 25 0 22464.0 + 17656 KPTGARPSAL 10 118 499.2930974812115 996.571642029223 2 499.2934448122978 MULTI CID FTMS 0 0 0 3837 149699.9375 0.1008459748031477 -8 0.1106338500976562 2 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 40.23920728925047 0.1550410903091231 1 KPT 3 7 46.995 0.0 0.0 4.7156 0.0 0.0 0.0 667.3534591472484 667.3534591472484 30.52887198244136 0.0 0.0 0.0 0 1.305462187404089 0.0 0.7742275032520141 0.0 + KPT 4.7156 + + 174 + 1 2.268 113590.5 1.0 817 3020 3837 DOHH2_400M_050219_1,3839 DOHH2_400M_050219_1,3839,KPTGARPSAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3840 19.388 800.0 95480.0 25 0 9057.2 -1 DSPEEAYCC 9 107 565.6914790873044 1129.3684052414087 2 565.6918823122978 MULTI CID FTMS 0 0 0 3837 108280.2109375 0.5864060217791425 -5 0.0576744079589843 3 2 Carbamidomethyl (C) _DSPEEAYC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000394275.6_1_15:91477270-91478348:+|nuORF 11.640296217721598 0.521594087909532 1 [HC][C(Carbamidomethyl (C))C]{M(Oxidation (M))|F}PSNY 9 -1 [HC][C(Carbamidomethyl (C))C]{M(Oxidation (M))|F} + + 28.092 -5.7841 -0.88963 2.4874 2.4874 49.493 0.0 0.0 0.0 0.0 21.1020658822838 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.6549471895720985 [HC][C(Carbamidomethyl (C))C]{M(Oxidation (M))|F}PSNY 2.4874 - 117 + 1 2.268 60847.1 0.5199999809265137 818 3020 3837 DOHH2_400M_050219_1,3840 DOHH2_400M_050219_1,3840,DSPEEAYCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3841 19.402 800.0 86452.0 25 0 6050.3 -1 ITRMYEESAL 10 111 614.7953103081074 1227.5760676830148 2 614.8026000857353 MULTI CID FTMS 0 0 0 -1 0 4 Oxidation (M) _ITRM(Oxidation (M))YEESAL_ ENSG00000170456|ENST00000389082|DENND5B;nc|ENSG00000170456|Q6ZUT9-2|DENND5B 27.628801355627647 0.3479284626772844 1 {I|L}TESNMK 7 -1 67.709 0.0 0.0 5.5157 0.0 0.0 0.0 421.1834505670532 421.1834505670532 32.826607393207965 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3252574989159953 {I|L}TESNMK 5.5157 - 655 + 1 2.268 54840.9 0.4699999988079071 819 3020 3837 DOHH2_400M_050219_1,3841 DOHH2_400M_050219_1,3841,ITRMYEESAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3843 19.411 264.0 192960.0 25 0 17140.0 + 30538 RELPGHTGY 9 79 515.2594882330824 1028.504423532965 2 515.2607299685478 MULTI CID FTMS 0 0 0 3842 115656.46875 0.3970292484811595 8 -0.2391738891601562 1 Unmodified _RELPGHTGY_ ENSG00000114450|ENST00000232564|GNB4;ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000172354|P62879-2|GNB2 29.84058131909904 0.1515068451768857 1 HTGY 4 5 43.175 0.0 0.0 4.1979 0.0 0.0 552.30082900215 0.0 552.30082900215 0.0 37.95880017344075 0.0 0.0 0 1.274227503252014 0.0 0.0 0.0 + HTGY 4.1979 + + 44 1 2.268 41462.5 1.0 820 3021 3842 DOHH2_400M_050219_1,3843 DOHH2_400M_050219_1,3843,RELPGHTGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3844 19.419 475.0 223600.0 25 0 28951.0 + 17462 KPEGTPQRI 9 106 513.2903020241806 1024.5660511151611 2 513.2906371951103 MULTI CID FTMS 0 0 0 3842 148973.515625 0.6010113359567957 -3 0.0768718719482421 2 Unmodified _KPEGTPQRI_ ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 19.361941925380144 0.3125782356748823 1 KPEG 4 5 46.063 0.0 0.0 4.4958 0.0 0.0 0.0 610.3289278619749 610.3289278619749 15.472491852379292 0.0 0.0 0.0 0 1.1382104921644451 0.0 0.4247425010840047 0.0 + KPEG 4.4958 + + 108 + 1 2.268 85872.9 1.0 821 3021 3842 DOHH2_400M_050219_1,3844 DOHH2_400M_050219_1,3844,KPEGTPQRI False True KPEGTPQRI 19.419252 513.29063719511 1243946.625 3842.0 ENSG00000177853|ENST00000316045|ZNF518A;;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 4.244121074676514 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3845 19.425 304.0 274090.0 25 0 9521.9 -1 FCYRRKNM 8 124 397.523288305993 1189.548035518179 3 397.5230590701103 MULTI CID FTMS 0 0 0 3842 138340.0625 0.4565982840853465 -2 0.0605030059814453 3 Carbamidomethyl (C),Oxidation (M) _FC(Carbamidomethyl (C))YRRKNM(Oxidation (M))_ ENST00000563158.1_1_16:46993297-46998617:-|nuORF 6.723162845929126 0.7835230281555235 1 EEE 3 -1 21.911 0.0 0.0 1.842 0.0 0.0 0.0 799.3943771650219 799.3943771650219 3.327731244245342 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 EEE 1.842 - 85 + 1 2.268 69286.2 1.0 822 3021 3842 DOHH2_400M_050219_1,3845 DOHH2_400M_050219_1,3845,FCYRRKNM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3846 19.439 800.0 210670.0 25 0 57209.0 + 43655 YARLHPRAV 9 113 541.8148554287093 0 541.8148681521416 PEAK CID FTMS 0 0 0 3842 138220.546875 0.8297626924558237 -3 0.0768718719482421 4 Unmodified _YARLHPRAV_ ENSG00000221983|ENST00000442744|UBA52 57.47134341890925 0.0195089841803479 1 A[YG]{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]}D 8 5 17.853 0.0 0.0 1.6506 0.0 0.0 99.0692433432832 96.08236871890858 195.15161206219176 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.5 0.8494850021680094 A[YG]{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]}D 1.6506 - 68 + 1 2.268 133104.5 0.5899999737739563 823 3021 3842 DOHH2_400M_050219_1,3846 DOHH2_400M_050219_1,3846,YARLHPRAV True True YARLHPRAV 19.438643 541.814868152142 12971882.125 3842.0 ENSG00000221983|ENST00000442744|UBA52 5.99817419052124 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3847 19.452 800.0 147160.0 25 0 37194.0 + 6888 EEERTRQGW 9 100 595.7813812612561 1189.548209589312 2 595.7824584841728 MULTI CID FTMS 0 0 0 3842 80017.6875 0.5117477609239243 -4 0.0809326171875 5 Unmodified _EEERTRQGW_ ENSG00000100591|ENST00000216479|AHSA1;ENST00000556369.1_3_14:77935388-77935589:+|nuORF 41.95555342248728 0.0647214845423414 1 EEERT 5 4 37.865 0.0 0.0 3.1832 0.0 0.0 0.0 542.2501925104124 542.2501925104124 21.41146579485298 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.6861818737241735 + EEERT 3.1832 + + 134 + 1 2.268 91672.5 0.4699999988079071 824 3021 3842 DOHH2_400M_050219_1,3847 DOHH2_400M_050219_1,3847,EEERTRQGW True True EEERTRQGW 19.452475 595.782458484173 833350.8125 3842.0 ENST00000556369.1_3_14:77935388-77935589:+|nuORF;;ENSG00000100591|ENST00000216479|AHSA1 7.88754399617513 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3849 19.469 800.0 80299.0 25 0 5087.8 + -1 PDCHLYTL 8 118 509.7378846885191 1017.4612164438382 2 509.7381469607353 MULTI CID FTMS 0 0 0 3848 33553.40625 0.1233092635178527 6 -0.1377601623535156 1 Carbamidomethyl (C) _PDC(Carbamidomethyl (C))HLYTL_ REV__ENST00000401088.8_1_1:16721635-16721806:+|nuORF 19.438996006549623 0.6237395211498085 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N 3 -1 14.705 0.0 0.0 1.4453 0.0 0.0 0.0 656.3260218531187 656.3260218531187 0.1009061466849221 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N 1.4453 - 139 + 1 2.268 53626.0 0.4699999988079071 825 3022 3848 DOHH2_400M_050219_1,3849 DOHH2_400M_050219_1,3849,PDCHLYTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3851 19.484 722.0 182990.0 25 0 18541.0 + 32763 SEDPSHPSM 9 141 493.69780939316 985.38106585312 2 493.6979858279228 MULTI CID FTMS 0 0 0 3850 150768.75 0.5841364210257148 3 -0.0655765533447265 1 Unmodified _SEDPSHPSM_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 52.268347100219714 0.0353964759249114 1 {[ES]|[DT]|[{I|L}C]}DPSH[WE] 8 3 + 39.843 0.0 0.0 4.0434 4.0434 73.209 0.0 0.0 0.0 6.989700043360188 2.3904909314019207 2.3904909314019207 2.3904909314019207 0 0.7742275032520141 0.0 0.6694451763165201 0.0 {[ES]|[DT]|[{I|L}C]}DPSH[WE];{[ES]|[DT]|[{I|L}C]}DPSHPSM;{[ES]|[DT]|[{I|L}C]}DPS[WE]H;{[ES]|[DT]|[{I|L}C]}D[YT]G[WE];{[ES]|[DT]|[{I|L}C]}[W{M(Oxidation (M))|F}]D[R{M(Oxidation (M))|F}];{[ES]|[DT]|[{I|L}C]}D[W{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}];{[ES]|[DT]|[{I|L}C]}D[YT]GPSM;{[ES]|[DT]|[{I|L}C]}D[W{M(Oxidation (M))|F}][TA]M;{[ES]|[DT]|[{I|L}C]}D[HV]D[PG]M;{[ES]|[DT]|[{I|L}C]}D[YT]WW 4.0434;3.8008;2.5023;2.3781;2.2119;2.2119;2.1355;2;1.8114;1.7277 -;+;-;-;-;-;-;-;-;- + 519 + 1 2.268 104146.7 1.0 826 3023 3850 DOHH2_400M_050219_1,3851 DOHH2_400M_050219_1,3851,SEDPSHPSM True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3854 19.493 27.0 2744300.0 25 0 145890.0 + 141 AALKKALAA 9 92 428.7845945284895 855.554636123779 2 428.7845336794853 MULTI CID FTMS 0 0 0 3853 2086218.625 0.4449250957736332 -4 0.0857315063476562 1 Unmodified _AALKKALAA_ ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2 52.268347100219714 0.0353964759249114 1 AA{I|L}K 4 5 50.452 0.0 0.0 5.8969 0.0 0.0 0.0 469.27829919986567 469.27829919986567 29.35918482682495 0.0 0.0 0.0 0 1.055462187404089 1.6989700043360187 0.0 0.0 + AA{I|L}K 5.8969 + + 122 + 1 2.268 62898.7 1.0 827 3025 3853 DOHH2_400M_050219_1,3854 DOHH2_400M_050219_1,3854,AALKKALAA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3855 19.507 800.0 68577.0 25 0 5449.1 -1 QMAAMSAQEYY 11 87 654.765254689059 1307.515956444918 2 654.7660400271416 MULTI CID FTMS 0 0 0 3853 91951.0546875 1.0 0 0.0 2 Oxidation (M) _QMAAM(Oxidation (M))SAQEYY_ ENSG00000162951|ENST00000295057|LRRTM1 11.494710602746466 0.7960433852372589 1 SNN[HC]TY 7 -1 32.568 0.0 0.0 2.4908 0.0 0.0 470.20572802870544 0.0 470.20572802870544 0.0 20.03614035128212 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 SNN[HC]TY 2.4908 - 493 + 1 2.268 44720.8 0.4699999988079071 828 3025 3853 DOHH2_400M_050219_1,3855 DOHH2_400M_050219_1,3855,QMAAMSAQEYY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3856 19.521 800.0 72775.0 25 0 3878.2 + -1 QEADSGKGTVSY 12 100 621.2859215208541 1240.557290108508 2 621.2860595583916 MULTI CID FTMS 0 0 0 3853 96620.9765625 1.0 0 0.0 3 Carbamidomethyl (C) _QEANAARPQC(Carbamidomethyl (C))P_ nc|ENSG00000101868|P09884|POLA1;ENSG00000101868|ENST00000379068|POLA1 26.268140514670165 0.4754186812857754 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[NP]{I|L}HH{M(Oxidation (M))|F}Y 10 -1 + 28.632 0.0 0.0 2.308 2.308 73.579 0.0 0.0 0.0 5.162574822053543 3.882353118286233 3.882353118286233 6.532125137753436 0 0.6747425010840047 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[NP]{I|L}HH{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HM]{I|L}HH{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GE[W{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AD[W{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[RH][W{M(Oxidation (M))|F}][HM];[AG]EA[RH][W{M(Oxidation (M))|F}][HM];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[YQ][RH]{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W[W{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[RH][YQ]{M(Oxidation (M))|F}Y;[AG]EA[RH][YQ]{M(Oxidation (M))|F}Y 2.308;1.7814;1.5714;1.4285;1.3063;1.2698;1.257;1.0449;1.0349;0.9984 -;-;-;-;-;-;-;-;-;- 235 + 1 2.268 49219.6 0.4900000095367431 829 3025 3853 DOHH2_400M_050219_1,3856 DOHH2_400M_050219_1,3856,QEANAARPQCP False False QEADSGKGTVSY 19.520599 621.286059558392 504651.96875 3853.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1 7.186972618103027 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3857 19.534 800.0 128310.0 25 0 30801.0 + 43444 WTADRVFDRH 10 85 434.8822017041066 0 434.8823119997978 PEAK CID FTMS 0 0 0 3853 98347.4453125 0.7183721276609101 71 -1.4407920837402344 4 Unmodified _WTADRVFDRH_ REV__ENSG00000116455|ENST00000235090|WDR77;REV__nc|ENSG00000116455|Q9BQA1-2|WDR77 3.5964929083625545 0.3961065659209837 1 N 1 -1 4.6041 0.0 0.0 0.53058 0.0 0.0 491.6439372443476 259.0398348443969 750.6837720887445 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.53058 - 10 + 1 2.268 84796.6 0.4300000071525574 830 3025 3853 DOHH2_400M_050219_1,3857 DOHH2_400M_050219_1,3857,WTADRVFDRH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3859 19.539 56.0 907400.0 25 0 77680.0 -1 ESATITCLV 9 72 497.24962202735554 992.4846911215112 2 497.2499267458916 MULTI CID FTMS 0 0 0 3858 1077462.25 0.9213925230118364 5 -0.2019710540771484 1 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 48.345845343767074 0.0439967357579942 1 {[ES]|[DT]|[{I|L}C]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 + 54.72 0.0 0.0 5.5135 5.5135 90.99 0.0 0.0 0.0 26.370090806403464 10.590992953673537 10.590992953673537 38.47363317170792 0 1.1861818737241734 0.0 0.3807196863200844 0.0 {[ES]|[DT]|[{I|L}C]}ATP{I|L}T{M(Oxidation (M))|F}K;[{I|L}P]TTKTA{[{M(Oxidation (M))|F}D]|MM} 5.5135;1.637 -;- 113 + 1 2.268 45080.5 1.0 831 3026 3858 DOHH2_400M_050219_1,3859 DOHH2_400M_050219_1,3859,ESATITCLV False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 3860 19.545 287.0 316610.0 25 0 111080.0 5106 DIARQKNQ 8 68 486.7651356083552 971.5157182835104 2 486.7648193240166 MULTI CID FTMS 0 0 0 3858 174489.859375 0.5007199612887975 -4 0.081939697265625 2 Unmodified _DIARQKNQ_ ENSG00000187325|ENST00000341864|TAF9B 5.230669730166228 0.792582437072536 1 D{I|L} 2 6 20.969 0.0 0.0 2.1584 0.0 0.0 0.0 740.3814172667934 740.3814172667934 10.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D{I|L} 2.1584 + + 6 + 1 2.268 76723.6 1.0 832 3026 3858 DOHH2_400M_050219_1,3860 DOHH2_400M_050219_1,3860,DIARQKNQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3861 19.559 800.0 80670.0 25 0 4710.4 + -1 YMNERVCFMFY 11 108 796.3221998137969 1590.6298466943938 2 796.3223144412041 MULTI CID FTMS 0 0 0 3858 128159.875 0.7099751983126578 -3 0.0655765533447265 3 Carbamidomethyl (C),2 Oxidation (M) _YM(Oxidation (M))NERVC(Carbamidomethyl (C))FM(Oxidation (M))FY_ REV__ENST00000602063.5_1_19:52495975-52496068:-|nuORF 1.4819007175156935 0.86815623132643 1 SGYSG[EP]GGGSY 12 -1 65.225 0.0 0.0 4.1006 0.0 0.0 474.2080460125563 0.0 474.2080460125563 0.0 20.367963810331524 0.0 0.0 0 0.0 0.0 2.372363747448347 0.0 SGYSG[EP]GGGSY 4.1006 - 20174 + 1 2.268 48625.4 0.5099999904632568 833 3026 3858 DOHH2_400M_050219_1,3861 DOHH2_400M_050219_1,3861,YMNERVCFMFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3863 19.564 64.0 936670.0 25 0 117510.0 + 43654 YARLHPRAV 9 78 361.54580561046566 1081.615587431597 3 361.5454284548759 MULTI CID FTMS 0 0 0 3862 626240.3125 0.5657167521935978 4 -0.1776504516601562 1 Unmodified _YARLHPRAV_ ENSG00000221983|ENST00000442744|UBA52 19.256988751693697 0.3154191944385105 1 VYQ{I|L}HV 6 6 44.213 0.0 0.0 4.0877 0.0 0.0 0.0 339.17780481510005 339.17780481510005 37.22357194224834 0.0 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.3807196863200844 VYQ{I|L}HV 4.0877 - 41 + 1 2.268 51110.1 1.0 834 3027 3862 DOHH2_400M_050219_1,3863 DOHH2_400M_050219_1,3863,YARLHPRAV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3864 19.573 523.0 126000.0 25 0 16903.0 + 6988 EEIPKRETY 9 82 582.798415327435 1163.58227772167 2 582.7986328005791 MULTI CID FTMS 0 0 0 3862 155623.515625 0.6895054606445774 -3 0.0748329162597656 2 Unmodified _EEIPKRETY_ ENSG00000116221|ENST00000360840|MRPL37;ENST00000490670.1_1_1:54670749-54673061:+|nuORF 21.53697664764585 0.2571576504437394 1 EE{I|L}PNVV 7 5 41.419 0.0 0.0 3.5596 0.0 0.0 0.0 380.1576632135376 380.1576632135376 27.4396447873054 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 EE{I|L}PNVV 3.5596 - 99 + 1 2.268 58272.2 1.0 835 3027 3862 DOHH2_400M_050219_1,3864 DOHH2_400M_050219_1,3864,EEIPKRETY False True EEIPKRETY 19.572741 582.798632800579 1321944.75 3862.0 ENSG00000116221|ENST00000360840|MRPL37;;ENST00000490670.1_1_1:54670749-54673061:+|nuORF 5.542563279469808 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3865 19.576 189.0 662300.0 25 0 104530.0 + -1 IQRLETMK 8 96 517.7866880635177 1033.5588231938352 2 517.7870971560478 MULTI CID FTMS 0 0 0 3862 313640.625 0.5660247752650698 -1 0.0243206024169921 3 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 1 KTT[{I|L}P][WP]K 8 -1 52.554 0.0 0.0 5.0848 0.0 0.0 63.99777765405708 0.0 63.99777765405708 0.0 33.76410021363377 0.0 0.0 0 1.6421590589602533 0.0 1.3494850021680094 0.3252574989159953 KTT[{I|L}P][WP]K 5.0848 - 487 + 1 2.268 98130.7 1.0 836 3027 3862 DOHH2_400M_050219_1,3865 DOHH2_400M_050219_1,3865,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3866 19.59 800.0 112360.0 25 0 13218.0 -1 0 95 597.2880844614867 596.2808079948867 1 597.2887451052666 MULTI CID FTMS 0 0 0 3862 150854.28125 0.8589978773005327 -2 0.0709400177001953 4 1 {[TV]|[{I|L}S]}YQS 5 -1 + 43.633 0.0 0.0 7.3175 7.3175 80.67 0.0 0.0 0.0 0.1278813061184536 4.387568628841265 0.1278813061184536 0.1278813061184536 0 1.1237125054200234 1.2218487496163564 0.0 0.0 {[TV]|[{I|L}S]}YQS;[YQ]S{I|L}S;{[TV]|[{I|L}S]}Y[AG]S;{[QS]|[NT]}Y{I|L}S;[AG]YS{I|L}S;[AG]SY{I|L}S;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GS{I|L}S;{[CT]|[{M(Oxidation (M))|F}G]}SS{I|L}S;{[ES]|[DT]|[{I|L}C]}Y[KA];[{I|L}T][YN]S 7.3175;7.2961;5.7172;5.1207;4.884;4.884;3.838;3.3397;2.607;0.34101 -;-;-;-;-;-;-;-;-;- 121 1 2.268 71806.9 0.6200000047683716 837 3027 3862 DOHH2_400M_050219_1,3866 DOHH2_400M_050219_1,3866, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3868 19.6 309.0 167400.0 25 0 10805.0 + 7995 EMGGHHIV 8 108 440.2110569732188 878.4075610132377 2 440.2117187380791 MULTI CID FTMS 0 0 0 3867 103718.71875 0.4935952318597005 -2 0.0558204650878906 1 Unmodified _EMGGHHIV_ ENSG00000165704|ENST00000298556|HPRT1 22.4526382665184 0.5719518724627818 1 V 1 7 15.713 0.0 0.0 1.7888 0.0 0.0 761.3282667400916 0.0 761.3282667400916 0.0 4.293354236017652 0.0 0.0 0 0.5 0.0 0.0 0.0 + V 1.7888 + + 44 + 1 2.278 43531.5 1.0 838 3028 3867 DOHH2_400M_050219_1,3868 DOHH2_400M_050219_1,3868,EMGGHHIV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3869 19.614 800.0 114790.0 25 0 7334.1 + 32782 SEEELKKAY 9 119 548.7794900391391 1095.544427145078 2 548.7799560427666 MULTI CID FTMS 0 0 0 3867 95175.2265625 0.7945755917608895 -1 0.0314998626708984 2 Unmodified _SEEELKKAY_ ENSG00000168724|ENST00000648817|DNAJC21;nc|ENSG00000168724|Q5F1R6-2|DNAJC21;nc|ENSG00000168724|Q5F1R6-3|DNAJC21 103.41943736471065 0.0091853052135676 1 SEEE{I|L}KKAY 9 0 + 116.97 0.0 0.0 10.676 10.676 98.855 0.0 0.0 0.0 60.06929883703016 14.09256854528806 14.09256854528806 31.51023442440469 0 2.385151878060192 2.0 1.2302046884880935 0.0 + + SEEE{I|L}KKAY;SE[QA]ATKKAY;SEE[RK][{I|L}T]AY;YA[HC]{I|L}KKAY;EESE{I|L}KKAY;S{M(Oxidation (M))|F}[HC]{I|L}KKAY;{[ES]|[DT]|[{I|L}C]}EE{I|L}KKAY;EESE{I|L}KK{M(Oxidation (M))|F}S;{[ES]|[DT]|[{I|L}C]}EE{I|L}KK{M(Oxidation (M))|F}S;Y[HD]ATKKAY 10.676;7.8003;7.1365;5.6246;5.3929;5.2411;5.1647;4.7485;4.5203;4.3283 +;-;-;-;-;-;+;-;-;- + 1552 + 1 2.278 74319.5 0.4799999892711639 839 3028 3867 DOHH2_400M_050219_1,3869 DOHH2_400M_050219_1,3869,SEEELKKAY True True SEEELKKAY 19.613555 548.779956042767 538220.5 3867.0 ENSG00000168724|ENST00000648817|DNAJC21;;nc|ENSG00000168724|Q5F1R6-3|DNAJC21;;nc|ENSG00000168724|Q5F1R6-2|DNAJC21 6.794928391774495 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3870 19.627 800.0 100610.0 25 0 5916.2 + 35501 STMSTNGIPR 10 117 540.2618420798118 0 540.2616454958916 PEAK CID FTMS 0 0 0 3867 210863.296875 1.0 0 0.0 3 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 55.50274090549119 0.030438250997227 1 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}R 7 3 33.852 0.0 0.0 3.1388 0.0 0.0 188.084985874802 112.04082666568593 300.12581254048786 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 1.1307196863200843 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}R 3.1388 - 130 + 1 2.278 68495.7 0.7300000190734863 840 3028 3867 DOHH2_400M_050219_1,3870 DOHH2_400M_050219_1,3870,STMSTNGIPR True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3871 19.641 800.0 164430.0 25 0 55311.0 + 143 AALKKALAA 9 49 856.562175455103 855.5548989885029 1 856.5629760622978 MULTI CID FTMS 0 0 0 3867 92977.6796875 0.8107073252974295 2 -0.0853424072265625 4 Unmodified _AALKKALAA_ ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2 29.081581746732265 0.1611639662936252 1 [K{I|L}]KAAA{I|L}AA 9 4 + 51.604 0.0 0.0 6.0316 6.0316 81.255 0.0 0.0 0.0 1.778259348524358 25.22878745280337 1.778259348524358 3.0102999566398125 0 0.0 0.0 0.0 0.0 [K{I|L}]KAAA{I|L}AA;KK{I|L}AAA{I|L}AA;[K{I|L}]KAA{I|L}AAA;[K{I|L}]AAKA{I|L}AA;KK{I|L}AA{I|L}AAA;[K{I|L}]KAAAA{I|L}A;[K{I|L}]AAK{I|L}AAA;KK{I|L}AAAA{I|L}A;[K{I|L}]AAAK{I|L}AA;[K{I|L}]KA{I|L}AAAA 6.0316;5.6798;5.474;5.392;5.1221;5.1221;4.8343;4.7703;4.6883;4.5644 -;-;-;-;-;-;-;-;-;- 344 1 2.278 97245.0 0.4300000071525574 841 3028 3867 DOHH2_400M_050219_1,3871 DOHH2_400M_050219_1,3871,AALKKALAA False True AALKKALAA 19.641234 856.562976062298 605305.0625 3867.0 ENSG00000168298|ENST00000304218|H1-4;;ENSG00000124575|ENST00000244534|H1-3;;ENSG00000184357|ENST00000331442|H1-5;;ENSG00000187837|ENST00000343677|H1-2;;ENSG00000124610|ENST00000244573|H1-1 5.743953863779704 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3873 19.658 800.0 42837.0 25 0 1938.9 -1 0 64 977.4168630035024 2929.228759610707 3 977.7520629763604 MULTI CID FTMS 0 0 0 3872 188570.796875 0.6377543136886027 6 -0.2024211883544922 1 1 [KQ]E 3 -1 14.181 0.0 0.0 0.48413 0.0 0.0 0.0 2541.009526782835 2541.009526782835 8.696662315049936 0.0 0.0 0.0 0 0.5 0.0 0.0 0.5 [KQ]E 0.48413 - 10 1 2.278 29324.2 0.6399999856948853 842 3029 3872 DOHH2_400M_050219_1,3873 DOHH2_400M_050219_1,3873, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3874 19.666 469.0 143270.0 25 0 13023.0 -1 DSPEEAYCC 9 96 565.6914790873044 1129.3684052414087 2 565.6920043826103 MULTI CID FTMS 0 0 0 3872 164087.3125 0.8886368738521923 4 -0.1618404388427734 2 2 Carbamidomethyl (C) _DSPEEAYC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000394275.6_1_15:91477270-91478348:+|nuORF 11.640296217721598 0.521594087909532 1 PSNY 4 -1 26.191 0.0 0.0 2.3191 0.0 0.0 650.1669713263817 0.0 650.1669713263817 0.0 16.657818142897128 0.0 0.0 0 0.0 0.0 0.0 0.6549471895720985 PSNY 2.3191 - 62 + 1 2.278 55620.9 1.0 843 3029 3872 DOHH2_400M_050219_1,3874 DOHH2_400M_050219_1,3874,DSPEEAYCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3875 19.673 368.0 347800.0 25 0 30204.0 + 8268 EQIKKTEL 8 125 494.7873929000029 987.560232866806 2 494.7873412966728 MULTI CID FTMS 0 0 0 3872 144109.921875 0.1534883885800678 -3 0.1068229675292968 3 Unmodified _EQIKKTEL_ ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A 56.17704186161178 0.1143274477948619 1 {I|L}KKT{M(Oxidation (M))|F}{I|L} 6 3 32.811 0.0 0.0 3.3224 0.0 0.0 239.0907459943375 0.0 239.0907459943375 0.0 12.64700473637742 0.0 0.0 0 0.3807196863200844 0.0 0.7302046884880937 0.0 {I|L}KKT{M(Oxidation (M))|F}{I|L} 3.3224 - 338 1 2.278 101430.1 1.0 844 3029 3872 DOHH2_400M_050219_1,3875 DOHH2_400M_050219_1,3875,EQIKKTEL True True EQIKKTEL 19.672546 494.787341296673 3885817.5 3872.0 ENSG00000107581|ENST00000369144|EIF3A;;nc|ENSG00000107581|Q14152-2|EIF3A 3.4692105452219644 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3876 19.676 153.0 706520.0 25 0 38384.0 + 2333 AQLAKPPP 8 124 411.2486786956688 820.4828044581376 2 411.2476379275322 MULTI CID FTMS 0 0 0 3872 275312.0625 0.6080509664850885 -2 0.0825023651123046 4 Unmodified _AQLAKPPP_ REV__CCDC168|p.N6414Kfs*2|1|0.14|ENSG00000175820|chr13:102731455-102731456|-/T|frameshift_variant;REV__ENSG00000175820|ENST00000322527|CCDC168 13.50788311687929 0.7113601687236069 1 E{I|L}{I|L}RKY 6 -1 + 77.629 0.0 0.0 9.4614 9.4614 97.282 0.0 0.0 0.0 54.68022709603949 12.703037561203844 12.703037561203844 18.56981400993132 0 1.1382104921644451 1.6989700043360187 0.0 0.6861818737241735 E{I|L}{I|L}RKY;E{I|L}{I|L}RP{[HG]|PP};E{I|L}[{I|L}V]GKY;{[QN]|[E{I|L}]|[KN]}{I|L}RKY;[RK]{I|L}NKY;E{I|L}[{I|L}V]GP{[HG]|PP};[RK]{I|L}GGKY;EVV[{I|L}A]KY;[QA]K[{I|L}A]KY;EVV[{I|L}A]P{[HG]|PP} 9.4614;7.1982;6.911;6.2718;4.2864;4.1946;3.1383;2.7691;2.1876;0.51673 -;-;-;-;-;-;-;-;-;- 104 + 1 2.278 88091.8 1.0 845 3029 3872 DOHH2_400M_050219_1,3876 DOHH2_400M_050219_1,3876,AQLAKPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3878 19.686 341.0 227780.0 25 0 25396.0 -1 EPWMVVREE 9 120 397.523288305993 1189.548035518179 3 397.5231811404228 MULTI CID FTMS 0 0 0 3877 65443.73046875 0.2160003002469017 7 -0.2083015441894531 1 Oxidation (M) _EPWM(Oxidation (M))VVREE_ ENSG00000197808|ENST00000588268|ZNF461 7.608950283845883 0.6490595679007971 1 W 1 -1 11.99 0.0 0.0 1.0079 0.0 0.0 985.4580524632946 0.0 985.4580524632946 0.0 -5.969100130080562 -5.969100130080562 0.0 0 0.0 0.0 0.0 0.0 W 1.0079 + + 29 + 1 2.288 65064.8 1.0 846 3030 3877 DOHH2_400M_050219_1,3878 DOHH2_400M_050219_1,3878,EPWMVVREE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3879 19.695 527.0 185110.0 25 0 23490.0 + 25171 MSEDKPQDY 9 107 556.7316859354462 1111.4488189376923 2 556.7319213747978 MULTI CID FTMS 0 0 0 3877 194782.21875 0.1208098027063432 -6 0.1916751861572265 2 Unmodified _MSEDKPQDY_ ENSG00000168036|ENST00000349496|CTNNB1;ENST00000465552.1_1_3:41277978-41278230:+|nuORF;ENST00000485265.1_1_3:41277322-41278230:+|nuORF 83.42873516780209 0.0166860047644719 1 MSEDKPQDY 9 0 + 110.4 0.0 0.0 9.9333 9.9333 96.352 0.0 0.0 0.0 36.47817481888637 12.946537861557983 12.946537861557983 12.946537861557983 0 1.079689690656103 2.0 1.1549471895720984 0.8494850021680094 + + MSEDKPQDY;MSEDKYD[QP];MSEDKP[AG]DY;MSEDKP{[DA]|[EG]}GY;MSEDKP{[CA]|SS}TM;MSWWPQDY;MSEDKWWM;MSEDKP[MT]{[CA]|SS};MSWWYD[QP];MSWWP[AG]DY 9.9333;8.7685;8.7227;7.7542;7.6674;7.5521;7.4678;6.9608;6.3873;5.9545 +;-;-;-;-;-;-;-;-;- + 1115 + 1 2.288 78200.2 1.0 847 3030 3877 DOHH2_400M_050219_1,3879 DOHH2_400M_050219_1,3879,MSEDKPQDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3880 19.709 800.0 106310.0 25 0 14427.0 -1 VTDSMQCFND 10 120 616.7313539640048 1231.4481549948096 2 616.7319213747978 MULTI CID FTMS 0 0 0 3877 112086.8828125 0.4419884500491953 -2 0.0853424072265625 3 Carbamidomethyl (C),Oxidation (M) _VTDSM(Oxidation (M))QC(Carbamidomethyl (C))FND_ nc|ENSG00000172728|Q6P4F1-2|FUT10 22.736283301280096 0.4578556481593033 1 {[TV]|[{I|L}S]}DPS{[{M(Oxidation (M))|F}C]|[YS]}DWY 10 -1 + 50.116 0.0 0.0 4.0697 4.0697 83.042 0.0 0.0 0.0 28.14376210212661 7.35863111416478 7.35863111416478 12.285622186931748 0 0.805462187404089 1.5228787452803376 0.0 0.0 {[TV]|[{I|L}S]}DPS{[{M(Oxidation (M))|F}C]|[YS]}DWY;{[TV]|[{I|L}S]}DPT[DC]{[{M(Oxidation (M))|F}D]|MM}GY;{[TV]|[{I|L}S]}DPP[YC(Carbamidomethyl (C))][DC]Y;{[TV]|[{I|L}S]}DPS[EC]{[{M(Oxidation (M))|F}D]|MM}GY;{[TV]|[{I|L}S]}DPS{[{M(Oxidation (M))|F}C]|[YS]}D[HD]P;[WE]PT[DC]S[MT]Y;[WE]PS[EC]S[MT]Y 4.0697;3.072;2.893;2.7733;2.3948;1.4444;1.1456 -;-;-;-;-;-;- 564 + 1 2.288 70940.6 0.5299999713897705 848 3030 3877 DOHH2_400M_050219_1,3880 DOHH2_400M_050219_1,3880,VTDSMQCFND False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 3881 19.723 800.0 153320.0 25 0 10328.0 + 40604 VLAEKRQL 8 121 478.7981170621688 955.5816811911376 2 478.7980224490166 MULTI CID FTMS 0 0 0 3877 91027.4296875 0.7634096148177394 -1 0.0343399047851562 4 Unmodified _VLAEKRQL_ ENSG00000167721|ENST00000301364|TSR1 25.399314129420983 0.5099049743284904 1 V{I|L}AEK 5 3 64.821 0.0 0.0 6.7834 0.0 0.0 0.0 412.2307528131469 412.2307528131469 54.54303227143333 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + V{I|L}AEK 6.7834 + + 149 + 1 2.288 98199.7 0.449999988079071 849 3030 3877 DOHH2_400M_050219_1,3881 DOHH2_400M_050219_1,3881,VLAEKRQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3882 19.736 800.0 165300.0 25 0 12315.0 + 668 AEMETQKEKI 10 125 603.8060739784208 1205.5975950236416 2 603.8056518435478 MULTI CID FTMS 0 0 0 3877 87966.71875 0.3312020606303197 -2 0.0853424072265625 5 Unmodified _AEMETQKEKI_ ENSG00000113810|ENST00000357388|SMC4;ENST00000467263.1_1_3:160130128-160131402:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 102.5486954659897 0.0074097081647412 1 AEMETQKEK{I|L} 10 0 + 112.43 0.0 0.0 9.3256 9.3256 92.851 0.0 0.0 0.0 67.31068653999205 11.091223126737646 11.091223126737646 9.164539485499247 0 2.8193415193665468 1.6989700043360187 1.5189301784845295 0.2396518287104437 + + AEMETQKEK{I|L};AEMET[AG]KEK{I|L};AEM{M(Oxidation (M))|F}{I|L}[EP]EK{I|L};AEMET[WK]RR;AEM{M(Oxidation (M))|F}{I|L}TRK[NP];{I|L}[DC]ETQKEK{I|L};AEM{M(Oxidation (M))|F}{I|L}KTR[NP];AEM{M(Oxidation (M))|F}{I|L}TKR[NP];{I|L}[DC]ET[AG]KEK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AETQKG{I|L}EA 9.3256;8.5654;6.2224;6.1853;5.7888;5.7776;5.4016;5.2894;5.0175;4.9696 +;-;-;-;-;-;-;-;-;- + 6769 + 1 2.288 98393.1 0.4699999988079071 850 3030 3877 DOHH2_400M_050219_1,3882 DOHH2_400M_050219_1,3882,AEMETQKEKI True True AEMETQKEKI 19.736383 603.805651843548 3116535.375 3877.0 ENST00000467263.1_1_3:160130128-160131402:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 5.207029501597087 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3884 19.754 800.0 43639.0 25 0 2176.8 -1 0 62 628.6924150126989 3138.425692730494 5 629.0938598513603 MULTI CID FTMS 0 0 0 3883 34630.21484375 0.4233379468183476 1 -0.0484428405761718 1 1 TGY[Y{I|L}]DP 7 -1 17.211 0.0 0.0 0.54839 0.0 0.0 1561.6900388241293 764.3269137018186 2326.016952525948 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TGY[Y{I|L}]DP 0.54839 - 95 + 1 2.302 36854.4 0.4699999988079071 851 3031 3883 DOHH2_400M_050219_1,3884 DOHH2_400M_050219_1,3884, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3885 19.757 156.0 455610.0 25 0 27233.0 + 3077 AVMRRDQSL 9 93 359.194262836588 1074.560959109964 3 359.1940795779228 MULTI CID FTMS 0 0 0 3883 254326.34375 0.640801898900224 -1 0.0608081817626953 2 Unmodified _AVMRRDQSL_ ENSG00000101182|ENST00000370873|PSMA7;ENST00000484488.5_1_20:60711915-60714832:-|nuORF;nc|ENSG00000101182|O14818-2|PSMA7 24.99096001346401 0.2132109383330889 1 AV{I|L} 3 6 46.242 0.0 0.0 4.3034 0.0 0.0 0.0 788.347927144702 788.347927144702 13.507112333562858 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 AV{I|L} 4.3034 - 129 + 1 2.302 60964.4 1.0 852 3031 3883 DOHH2_400M_050219_1,3885 DOHH2_400M_050219_1,3885,AVMRRDQSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3886 19.771 800.0 160030.0 25 0 16638.0 + 35199 SSDKYGDTSY 10 150 561.7327385941902 1121.4509242551803 2 561.7332641482353 MULTI CID FTMS 0 0 0 3883 132754.890625 0.3654323771136963 -5 0.2019710540771484 3 Unmodified _SSDKYGDTSY_ ENSG00000109445|ENST00000262990|ZNF330 107.5634045930896 0.0042230779264997 1 {[CA]|SS}DKYADSSY 10 2 + 79.497 0.0 0.0 7.0887 7.0887 81.132 0.0 0.0 0.0 6.052659518797938 14.146518864155126 6.052659518797938 0.8669687155616401 0 2.15051499783199 0.0 2.7971062485323515 0.0 {[CA]|SS}DKYADSSY;{[CA]|SS}DKYGDTSY;{[CA]|SS}DKYGESSY;{[C(Carbamidomethyl (C))E]|[WC]}KYADSSY;{[C(Carbamidomethyl (C))E]|[WC]}KYGDTSY;{[C(Carbamidomethyl (C))E]|[WC]}KYGESSY;{[CA]|SS}DKYWSSY;{[CA]|SS}D{M(Oxidation (M))|F}SKDSSY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[CA]|SS}YADSSY;{[MG]|[TS]}{M(Oxidation (M))|F}TSKDSSY 7.0887;7.0114;6.7924;6.549;6.4717;6.2527;6.2339;6.0919;5.8445;5.8202 -;+;-;-;-;-;-;-;-;- + 6379 1 2.302 100727.2 0.5899999737739563 853 3031 3883 DOHH2_400M_050219_1,3886 DOHH2_400M_050219_1,3886,SSDKYGDTSY True True SSDKYGDTSY 19.770996 561.733264148235 1522994.875 3883.0 ENSG00000109445|ENST00000262990|ZNF330 9.040465354919434 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3887 19.785 800.0 57661.0 25 0 5141.5 -1 0 47 874.6428025838001 4368.177630586 5 875.0427734255791 MULTI CID FTMS 0 0 0 3883 64656.3359375 0.7284873380160911 2 -0.0666923522949218 4 1 GQS[QP] 5 -1 26.466 0.0 0.0 0.60588 0.0 0.0 3852.941750782288 0.0 3852.941750782288 0.0 14.247425010840049 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 GQS[QP] 0.60588 - 25 1 2.302 44498.5 0.3799999952316284 854 3031 3883 DOHH2_400M_050219_1,3887 DOHH2_400M_050219_1,3887, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3889 19.79 67.0 1260100.0 25 0 73560.0 + 142 AALKKALAA 9 110 428.7845945284895 855.554636123779 2 428.7844726443291 MULTI CID FTMS 0 0 0 3888 584099.5625 0.1245701436428551 3 -0.0588302612304687 1 Unmodified _AALKKALAA_ ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2 32.30548876998284 0.1201446275138228 1 [{I|L}A]KKA{I|L}{[NV]|[RG]} 8 3 + 16.386 0.0 0.0 1.9153 1.9153 66.686 0.0 0.0 0.0 0.8617181818402351 3.0550741699044472 0.8617181818402351 0.8617181818402351 0 0.0 0.721246399047171 0.0 0.0 [{I|L}A]KKA{I|L}{[NV]|[RG]};AA{I|L}KK{I|L}{[NV]|[RG]};[{I|L}A]KAK{I|L}{[NV]|[RG]};[K{I|L}]AKA{I|L}{[NV]|[RG]};[K{I|L}]AAK{I|L}{[NV]|[RG]} 1.9153;1.8145;1.5634;1.2965;0.94467 -;-;-;-;- 73 1 2.302 69812.3 1.0 855 3032 3888 DOHH2_400M_050219_1,3889 DOHH2_400M_050219_1,3889,AALKKALAA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3890 19.792 117.0 607950.0 25 0 68545.0 + 669 AEMETQKEKI 10 92 402.87296800791984 1205.5970746239595 3 402.8726684451103 MULTI CID FTMS 0 0 0 3888 408417.15625 0.8865860848436631 -2 0.1092510223388671 2 Unmodified _AEMETQKEKI_ ENSG00000113810|ENST00000357388|SMC4;ENST00000467263.1_1_3:160130128-160131402:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 18.373094154950223 0.5392593366289069 1 ME 2 8 18.711 0.0 0.0 1.552 0.0 0.0 200.08211660709384 742.4116904911098 942.4938070982035 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.0 + ME 1.552 + + 146 + 1 2.302 56184.0 1.0 856 3032 3888 DOHH2_400M_050219_1,3890 DOHH2_400M_050219_1,3890,AEMETQKEKI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3891 19.799 371.0 245280.0 25 0 66038.0 + 3078 AVMRRDQSL 9 88 538.2868765399367 1074.5592001466732 2 538.2874023318291 MULTI CID FTMS 0 0 0 3888 170718.609375 0.909348545195101 -1 0.0484428405761718 3 Unmodified _AVMRRDQSL_ ENSG00000101182|ENST00000370873|PSMA7;ENST00000484488.5_1_20:60711915-60714832:-|nuORF;nc|ENSG00000101182|O14818-2|PSMA7 15.847184025352805 0.4077185912009129 1 {I|L}S 2 8 18.583 0.0 0.0 1.7294 0.0 0.0 0.0 871.4214241746456 871.4214241746456 5.484550065040281 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}S 1.7294 - 33 + 1 2.302 74080.7 1.0 857 3032 3888 DOHH2_400M_050219_1,3891 DOHH2_400M_050219_1,3891,AVMRRDQSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3892 19.803 207.0 286500.0 25 0 36498.0 23232 LSTALMGPFA 10 89 504.264703086487 0 504.2642700076103 PEAK CID FTMS 0 0 0 3888 198255.578125 0.3565333402120302 -126 2.6705360412597656 4 Unmodified _LSTALMGPFA_ ENST00000535372.1_1_6:160182454-160183030:-|nuORF;ENST00000546087.5_2_6:160182454-160182694:-|nuORF 10.823927491677226 0.3685635357628707 1 TEDS 4 9 12.652 0.0 0.0 1.257 0.0 0.0 161.10477130793646 410.2424715631469 571.3472428710834 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TEDS 1.257 - 25 + 1 2.302 51083.0 1.0 858 3032 3888 DOHH2_400M_050219_1,3892 DOHH2_400M_050219_1,3892,LSTALMGPFA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3894 19.809 150.0 399650.0 25 0 46736.0 + 17585 KPTAAFHLL 9 71 499.2930974812115 996.571642029223 2 499.2930786013603 MULTI CID FTMS 0 0 0 3893 313411.375 0.2111308538540297 5 -0.0846939086914062 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 30.22481116460888 0.1466181017706357 1 KPT 3 -1 43.94 0.0 0.0 4.4091 0.0 0.0 0.0 667.353862011562 667.353862011562 31.95046257204389 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 KPT 4.4091 + + 32 + 1 2.302 50591.8 1.0 859 3033 3893 DOHH2_400M_050219_1,3894 DOHH2_400M_050219_1,3894,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3895 19.812 189.0 337410.0 25 0 109310.0 5992 DRKSDRPV 8 62 486.7651356083552 971.5157182835104 2 486.7648498415947 MULTI CID FTMS 0 0 0 3893 193374.484375 0.554911699036901 3 -0.0446491241455078 2 Unmodified _DRKSDRPV_ ENSG00000119596|ENST00000325680|YLPM1;nc|ENSG00000119596|P49750-1|YLPM1;nc|ENSG00000119596|P49750-3|YLPM1 7.910154910731844 0.7763180056447161 1 D{I|L} 2 7 20.969 0.0 0.0 2.1584 0.0 0.0 0.0 740.3803146346338 740.3803146346338 20.48455006504028 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L} 2.1584 - 9 + 1 2.302 53449.9 1.0 860 3033 3893 DOHH2_400M_050219_1,3895 DOHH2_400M_050219_1,3895,DRKSDRPV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3897 19.821 360.0 247800.0 25 0 90043.0 -1 0 97 406.2257206718292 405.2184442052292 1 406.2251159548759 MULTI CID FTMS 0 0 0 3896 134268.234375 0.116371000059911 42 -0.6370697021484375 1 1 M 1 -1 11.783 0.0 0.0 2.9077 0.0 0.0 256.166852263626 0.0 256.166852263626 0.0 1.2981865525287797 0.0 0.0 0 0.0 0.0 0.0 0.0 M 2.9077 - 12 + 1 2.302 75524.5 1.0 861 3034 3896 DOHH2_400M_050219_1,3897 DOHH2_400M_050219_1,3897, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3898 19.83 485.0 173790.0 25 0 22681.0 + 44722 YPHHATQL 8 112 483.74358171072487 0 483.7437316775322 PEAK CID FTMS 0 0 0 3896 153458.046875 1.0 0 0.0 2 Unmodified _YPHHATQL_ ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 63.562846038646086 0.009358233783553 1 PYPGE 5 7 18.729 0.0 0.0 1.9399 0.0 0.0 180.09091023295133 239.1037996881469 419.1947099210983 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 PYPGE 1.9399 - 86 + 1 2.302 68066.2 1.0 862 3034 3896 DOHH2_400M_050219_1,3898 DOHH2_400M_050219_1,3898,YPHHATQL True True YPHHATQL 19.829826 483.743731677532 710238.8125 3896.0 ENST00000563314.5_1_16:28834580-28846939:+|nuORF;;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;;ENSG00000168488|ENST00000336783|ATXN2L;;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;;nc|ENSG00000168488|Q8WWM7-5|ATXN2L 6.2788621584574384 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3899 19.844 800.0 165760.0 25 0 6811.1 + 34699 SPTPEAEEQL 10 159 550.7566307097687 1099.4987084863374 2 550.7568237185478 MULTI CID FTMS 0 0 0 3896 131968.703125 0.454194378484838 -4 0.1366653442382812 3 Unmodified _SPTPEAEEQL_ REV__ENSG00000225614|ENST00000565624|ZNF469 18.1463463914782 0.5430639438673815 1 NS{I|L} 3 -1 24.18 0.0 0.0 2.1992 0.0 0.0 767.330356290828 0.0 767.330356290828 0.0 10.019315147138109 0.0 0.0 0 0.4247425010840047 0.0 0.2396518287104437 0.0 NS{I|L} 2.1992 - 285 + 1 2.302 102702.3 0.5799999833106995 863 3034 3896 DOHH2_400M_050219_1,3899 DOHH2_400M_050219_1,3899,SPTPEAEEQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3902 19.86 543.0 123290.0 25 0 6355.7 + 2654 ATDISRQNEY 10 97 598.7806683907934 1195.546783848387 2 598.7804443240166 MULTI CID FTMS 0 0 0 3901 167688.4375 0.7856955020867815 -2 0.0354843139648437 1 Unmodified _ATDISRQNEY_ ENSG00000205268|ENST00000401827|PDE7A;nc|ENSG00000205268|Q13946-2|PDE7A;nc|ENSG00000205268|Q13946-3|PDE7A 70.92866715596459 0.0189067049654103 1 [TA]D{I|L}W[KG]NEY 10 3 + 52.435 0.0 0.0 4.3859 4.3859 74.658 0.0 0.0 0.0 0.3704486327003877 33.58378615054404 0.3704486327003877 2.5459619382160383 0 2.1237125054200234 2.0 0.7887254899964358 0.0 [TA]D{I|L}W[KG]NEY;[TA]D{I|L}S[VS][{M(Oxidation (M))|F}E]{NN|[MP]|[D{I|L}]|[EV]};[TA]D{I|L}W[W{I|L}]EY;[TA]D{I|L}W{NN|[MP]|[D{I|L}]|[EV]}AEY;[TA]{[TV]|[{I|L}S]}DRQNEY;[TA]D{I|L}[KP]{[YD]|[{M(Oxidation (M))|F}M]}HH;[PG]D[WD][KP]{I|L}D[PG];{[ES]|[DT]|[{I|L}C]}A{I|L}W[KG]NEY;[YE]{[ET]|[MV]}[VS]S{I|L}D[PG];[YE]{[YD]|[{M(Oxidation (M))|F}M]}[KP]{I|L}D[PG] 4.3859;4.1729;4.0247;3.9864;3.8045;3.3711;2.8468;2.1211;1.9894;1.8027 -;-;-;-;-;-;-;-;-;- 277 1 2.313 54180.9 1.0 864 3036 3901 DOHH2_400M_050219_1,3902 DOHH2_400M_050219_1,3902,ATDISRQNEY True True ATDISRQNEY 19.859805 598.780444324017 823686.0625 3901.0 nc|ENSG00000205268|Q13946-2|PDE7A;;ENSG00000205268|ENST00000401827|PDE7A;;nc|ENSG00000205268|Q13946-3|PDE7A 7.212168534596761 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3903 19.87 585.0 232300.0 25 0 23359.0 + 17528 KPLNSLFHL 9 115 534.8115335933727 1067.6085142535453 2 534.8118163943291 MULTI CID FTMS 0 0 0 3901 167517.734375 0.3878783693004196 -5 0.1113414764404296 2 Unmodified _KPLNSLFHL_ ENST00000431189.1_1_7:130652197-130668861:-|nuORF 41.8396318013385 0.0653578398400075 1 KPT 3 7 43.188 0.0 0.0 4.0453 0.0 0.0 0.0 738.3914315460901 738.3914315460901 8.328343541910655 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.0 KPT 4.0453 - 275 + 1 2.313 109360.4 1.0 865 3036 3901 DOHH2_400M_050219_1,3903 DOHH2_400M_050219_1,3903,KPLNSLFHL True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3904 19.884 800.0 158330.0 25 0 8114.7 + 15741 IRSDKELP 8 131 479.2723725391731 0 479.2726013064384 PEAK CID FTMS 0 0 0 3901 106629.8359375 1.0 0 0.0 3 Unmodified _IRSDKELP_ REV__ENSG00000169410|ENST00000618819|PTPN9 14.838274106304384 0.487171416001894 1 EPK 3 -1 14.541 0.0 0.0 1.5202 0.0 0.0 131.09778677978028 468.22031580142817 599.3181025812084 0.0 0.0 0.0 0.0 0 0.484825539911597 0.0 0.0 0.0 EPK 1.5202 - 33 + 1 2.313 102793.0 0.4900000095367431 866 3036 3901 DOHH2_400M_050219_1,3904 DOHH2_400M_050219_1,3904,IRSDKELP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3907 19.893 85.0 702190.0 25 0 49542.0 + 35222 SSDPYHSGY 9 94 506.70406562519815 1011.3935783171964 2 506.7042114138603 MULTI CID FTMS 0 0 0 3906 677131.375 0.1331291449173653 -8 0.2121944427490234 1 Unmodified _SSDPYHSGY_ ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT 77.98433622928108 0.0180125044636492 1 {[CA]|SS}DPY[HS]GY 9 0 + 43.746 0.0 0.0 4.3253 4.3253 86.032 0.0 0.0 0.0 20.49681237692305 10.625145978905053 10.625145978905053 24.87089342604754 0 0.7614393726401688 0.0 1.1237125054200234 0.0 + + {[CA]|SS}DPY[HS]GY;{[WN]|[YH]}PSGY{[C(Carbamidomethyl (C))E]|[WC]};{[CA]|SS}D[HT][{M(Oxidation (M))|F}V]GY;{[WN]|[YH]}GSYP{[C(Carbamidomethyl (C))E]|[WC]};{[WN]|[YH]}GSPY{[C(Carbamidomethyl (C))E]|[WC]};{[CA]|SS}D{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}GY;[HS]GYYP{[C(Carbamidomethyl (C))E]|[WC]};[HS]GYPY{[C(Carbamidomethyl (C))E]|[WC]};{[CA]|SS}[C(Carbamidomethyl (C))K]{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))E]|[WC]};{[SA]|[TG]}M{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}GY 4.3253;1.8663;1.7803;1.6644;1.5686;1.3868;0.7052;0.60939;0.58097;0.53866 +;-;-;-;-;-;-;-;-;- + 381 + 1 2.313 49652.3 1.0 867 3038 3906 DOHH2_400M_050219_1,3907 DOHH2_400M_050219_1,3907,SSDPYHSGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3908 19.895 116.0 393700.0 25 0 31985.0 + 6337 DVKSKTEAL 9 73 495.7763201358926 989.5380873385852 2 495.7761108279228 MULTI CID FTMS 0 0 0 3906 348166.40625 0.6793761775622028 5 -0.1332015991210937 2 Unmodified _DVKSKTEAL_ ENSG00000129083|ENST00000439561|COPB1 38.17557092003332 0.0854718145212029 1 DVKS 4 5 65.107 0.0 0.0 6.5796 0.0 0.0 0.0 557.2958468072874 557.2958468072874 48.65356566548286 0.0 0.0 0.0 0 0.75 2.0 0.3807196863200844 0.4247425010840047 + DVKS 6.5796 + + 136 + 1 2.313 43646.1 1.0 868 3038 3906 DOHH2_400M_050219_1,3908 DOHH2_400M_050219_1,3908,DVKSKTEAL True True DVKSKTEAL 19.894963 495.776110827923 2788261.5 3906.0 ENSG00000129083|ENST00000439561|COPB1 4.922548770904541 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3910 19.911 800.0 149390.0 25 0 7922.0 + 38471 TSDLQDKNEY 10 134 606.772723888243 1211.530894843286 2 606.7729369997978 MULTI CID FTMS 0 0 0 3909 183222.75 0.1373363559320843 -4 0.0513248443603515 1 Unmodified _TSDLQDKNEY_ ENSG00000075188|ENST00000552283|NUP37;ENST00000551200.5_1_12:102471044-102512308:-|nuORF 128.5786326129116 0.0002163543161949 1 {[MG]|[TS]}D{I|L}QAQ{[WT]|[RM]}Y 10 4 + 74.02 0.0 0.0 6.1096 6.1096 87.766 0.0 0.0 0.0 15.261992707521529 12.001962355242952 12.001962355242952 9.164539485499262 0 2.110924374808178 0.0 0.6421590589602533 1.555462187404089 {[MG]|[TS]}D{I|L}QAQ{[WT]|[RM]}Y;{[MG]|[TS]}D{I|L}QA[AG]{[WT]|[RM]}Y;{[MG]|[TS]}D{I|L}[AG]AQ{[WT]|[RM]}Y;{[MG]|[TS]}D{I|L}QDK[YE]N;{[QD]|[EN]|[WG]|[KD]|[RS]}KDQVTSEY;AATQDQVTSEY;{[QD]|[EN]|[WG]|[KD]|[RS]}KDQ{I|L}SSEY;AATQDQ{I|L}SSEY;{[MG]|[TS]}D{I|L}[TP]E{[WT]|[RM]}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}KNEVTSEY 6.1096;5.3532;5.3532;4.8486;4.7028;4.6908;4.6828;4.6708;4.4083;4.3489 -;-;-;-;-;-;-;-;-;- 7636 + 1 2.313 92106.8 0.6299999952316284 869 3039 3909 DOHH2_400M_050219_1,3910 DOHH2_400M_050219_1,3910,TSDLQDKNEY True True TSDLQDKNEY 19.911372 606.772936999798 10666134.0 3909.0 ENST00000551200.5_1_12:102471044-102512308:-|nuORF;;ENSG00000075188|ENST00000552283|NUP37 7.968305587768555 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3911 19.925 800.0 79385.0 25 0 5557.6 + 30558 RENVEAAQSY 10 98 583.7753616040612 1165.5361702749224 2 583.7758056521416 MULTI CID FTMS 0 0 0 3909 86868.1796875 1.0 0 0.0 2 Unmodified _RENVEAAQSY_ ENSG00000176390|ENST00000324238|CRLF3;nc|ENSG00000176390|Q8IUI8-2|CRLF3 29.43715596616401 0.3072975788498757 1 VEAAQSY 7 3 53.264 0.0 0.0 4.5699 0.0 0.0 399.1862660138688 0.0 399.1862660138688 0.0 36.273816809939774 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 + VEAAQSY 4.5699 + + 251 1 2.313 51645.3 0.4900000095367431 870 3039 3909 DOHH2_400M_050219_1,3911 DOHH2_400M_050219_1,3911,RENVEAAQSY False True RENVEAAQSY 19.925203 583.775805652142 378136.25 3909.0 ENSG00000176390|ENST00000324238|CRLF3;;nc|ENSG00000176390|Q8IUI8-2|CRLF3 6.849637190500896 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3912 19.931 304.0 228090.0 25 0 18583.0 20658 LLQKMLRKL 9 96 381.5863036401764 1141.7370815207291 3 381.5860168337822 MULTI CID FTMS 0 0 0 3909 84789.65625 0.9656561410914016 -2 0.0111045837402343 3 Unmodified _LLQKMLRKL_ ENSG00000170004|ENST00000330494|CHD3;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3 2.282774691075616 0.8349936567342158 1 {I|L}K[KP]E 5 6 22.218 0.0 0.0 1.946 0.0 0.0 528.374315330275 0.0 528.374315330275 0.0 10.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}K[KP]E 1.946 - 26 1 2.313 62548.9 1.0 871 3039 3909 DOHH2_400M_050219_1,3912 DOHH2_400M_050219_1,3912,LLQKMLRKL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3914 19.946 625.0 202950.0 25 0 25030.0 + 390 AEDMTSKDY 9 133 530.2175712722858 1058.4205896113715 2 530.2184326052666 MULTI CID FTMS 0 0 0 3913 171976.578125 1.0 0 0.0 1 Unmodified _AEDMTSKDY_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 53.40400417844725 0.0329064971918313 1 {[CP]|[EA]}DMTSKDY 9 0 + 60.037 0.0 0.0 5.6724 5.6724 90.636 0.0 0.0 0.0 12.757486997011952 15.46311164755508 12.757486997011952 22.575608550948942 0 1.3494850021680094 0.0 1.0501648626366045 0.0 + + {[CP]|[EA]}DMTSKDY;[TA]ASTMD{[CP]|[EA]}Y;[KS]TDMD{[CP]|[EA]}Y;{[CP]|[EA]}DM[HK]ECP;{[CP]|[EA]}DMT[HM]AGP;[TA]ASTMDY{[CP]|[EA]};[KS]DTMD{[CP]|[EA]}Y;[KS]TDMDY{[CP]|[EA]};{[CP]|[EA]}DMT[VP][C(Carbamidomethyl (C))H];{[CP]|[EA]}DMT[RH]CP 5.6724;3.5394;3.5054;3.2791;3.2292;3.0844;3.0799;3.0504;3.022;2.9718 +;-;-;-;-;-;-;-;-;- + 893 + 1 2.325 99194.4 1.0 872 3040 3913 DOHH2_400M_050219_1,3914 DOHH2_400M_050219_1,3914,AEDMTSKDY True True AEDMTSKDY 19.945538 530.218432605267 756055.9375 3913.0 ENSG00000126457|ENST00000454376|PRMT1;;nc|ENSG00000126457|Q99873-5|PRMT1;;nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENST00000525616.1_1_19:50180537-50188241:+|nuORF 7.076560656229655 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3915 19.949 157.0 438670.0 25 0 68090.0 + 29756 QPQGSFAAPAI 11 72 543.7803602892399 1085.5461676452796 2 543.7807494997978 MULTI CID FTMS 0 0 0 3913 368499.46875 0.1886344236563777 -11 0.2895164489746094 2 Unmodified _QPQGSFAAPAI_ REV__ENSG00000175727|ENST00000319080|MLXIP;REV__ENST00000541750.1_12:122618368-122620257:+|nuORF;REV__nc|ENSG00000175727|Q9HAP2-2|MLXIP;REV__nc|ENSG00000175727|Q9HAP2-4|MLXIP 38.17557092003332 0.2405003631267018 1 [QP]QDT[WK]A{I|L} 9 -1 + 45.894 0.0 0.0 4.2278 4.2278 81.655 0.0 0.0 0.0 19.691512336730028 16.478174818886373 16.478174818886373 9.208187539523747 0 0.7742275032520141 0.0 0.3807196863200844 0.3252574989159953 [QP]QDT[WK]A{I|L};[QP][AG]DT[WK]A{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[Q{I|L}]D{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L} 4.2278;3.3795;1.1368 -;-;- 158 + 1 2.325 57865.0 1.0 873 3040 3913 DOHH2_400M_050219_1,3915 DOHH2_400M_050219_1,3915,QPQGSFAAPAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3916 19.959 565.0 176420.0 25 0 46691.0 + 30555 RENLPGRNY 9 86 559.7886666813057 1117.5627804294113 2 559.7891113162041 MULTI CID FTMS 0 0 0 3913 134193.140625 0.8355080469234595 3 -0.090219497680664 3 Unmodified _RENLPGRNY_ ENSG00000173757|ENST00000293328|STAT5B;ENST00000468496.5_1_17:40362419-40369297:-|nuORF 38.61474834105838 0.0830609365873449 1 {[RE]|[WV]}N{I|L}[PG]RD 8 2 40.693 0.0 0.0 3.6412 0.0 0.0 0.0 177.06701368794657 177.06701368794657 19.72357194224834 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.6747425010840047 {[RE]|[WV]}N{I|L}[PG]RD 3.6412 - 95 1 2.325 79572.9 1.0 874 3040 3913 DOHH2_400M_050219_1,3916 DOHH2_400M_050219_1,3916,RENLPGRNY True True RENLPGRNY 19.958582 559.789111316204 1442915.75 3913.0 ENSG00000173757|ENST00000293328|STAT5B;;ENST00000468496.5_1_17:40362419-40369297:-|nuORF 8.804157574971518 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3917 19.972 800.0 38954.0 25 0 3199.0 -1 0 28 1187.2771196682456 5931.349216008229 5 1187.675830066204 MULTI CID FTMS 0 0 0 3913 59639.62890625 0.7216755574597201 -4 0.0830268859863281 4 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.325 26010.8 0.3000000119209289 875 3040 3913 DOHH2_400M_050219_1,3917 DOHH2_400M_050219_1,3917, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3919 19.977 69.0 589140.0 25 0 92046.0 + 25172 MSEDKPQDY 9 65 556.7316859354462 1111.4488189376923 2 556.7320434451103 MULTI CID FTMS 0 0 0 3918 771322.1875 0.4783972679482585 5 -0.066598892211914 1 Unmodified _MSEDKPQDY_ ENSG00000168036|ENST00000349496|CTNNB1;ENST00000465552.1_1_3:41277978-41278230:+|nuORF;ENST00000485265.1_1_3:41277322-41278230:+|nuORF 43.77239144664712 0.0547478964384323 1 MSEDK[QP]DY 9 0 + 79.927 0.0 0.0 7.1912 7.1912 92.703 0.0 0.0 0.0 36.47817481888637 10.511525224473814 10.511525224473814 10.511525224473814 0 0.3807196863200844 2.0 0.4247425010840047 0.4247425010840047 + + MSEDK[QP]DY;MSEDK{[YD]|[{M(Oxidation (M))|F}M]}[QP];MSWW[QP]DY;MSWW{[YD]|[{M(Oxidation (M))|F}M]}[QP];{[MG]|[TS]}[W{M(Oxidation (M))|F}]KDE{[CP]|[EA]};{[QD]|[EN]|[WG]|[KD]|[RS]}E[NP][Y{M(Oxidation (M))|F}]{[CP]|[EA]};{[MG]|[TS]}[W{M(Oxidation (M))|F}]WW{[CP]|[EA]} 7.1912;6.2455;5.1922;4.2464;2.3166;0.71388;0.31752 +;-;-;-;-;-;- + 123 + 1 2.325 36194.7 1.0 876 3041 3918 DOHH2_400M_050219_1,3919 DOHH2_400M_050219_1,3919,MSEDKPQDY True True MSEDKPQDY 19.977232 556.73204344511 17314648.0 3918.0 ENSG00000168036|ENST00000349496|CTNNB1;;ENST00000485265.1_1_3:41277322-41278230:+|nuORF;;ENST00000465552.1_1_3:41277978-41278230:+|nuORF 9.583900451660156 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3920 19.979 73.0 837550.0 25 0 80209.0 + 1756 ALREKTSL 8 100 459.2741983089665 916.533843684733 2 459.2743102908134 MULTI CID FTMS 0 0 0 3918 701148.125 0.7506254113315675 -3 0.0846748352050781 2 Unmodified _ALREKTSL_ ENSG00000072571|ENST00000393915|HMMR;ENST00000517936.1_1_5:162887680-162896865:+|nuORF;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 43.85829265575387 0.1697421968005898 1 [{I|L}A]REKTS{I|L} 8 0 + 55.399 0.0 0.0 6.0444 6.0444 93.354 0.0 0.0 0.0 18.41637507904749 49.91434719156942 18.41637507904749 55.3988972566097 0 1.1549471895720984 1.6989700043360187 0.3494850021680094 0.0 + + [{I|L}A]REKTS{I|L} 6.0444 + + 43 1 2.325 55937.7 1.0 877 3041 3918 DOHH2_400M_050219_1,3920 DOHH2_400M_050219_1,3920,ALREKTSL False True ALREKTSL 19.979384 459.274310290813 3503448.0 3918.0 nc|ENSG00000072571|O75330-4|HMMR;;nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;ENST00000517936.1_1_5:162887680-162896865:+|nuORF;;ENSG00000072571|ENST00000393915|HMMR 2.343540589014689 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3921 19.981 90.0 703080.0 25 0 59930.0 + 16636 KEIGTKQSF 9 102 519.2852441443208 1036.5559353554415 2 519.2850219607353 MULTI CID FTMS 0 0 0 3918 547708.875 0.6096880047053304 -5 0.1247196197509765 3 Unmodified _KEIGTKQSF_ ENSG00000102699|ENST00000381989|PARP4 32.037481411007896 0.1235546156350648 1 KE{I|L}{M(Oxidation (M))|F}C 5 6 57.083 0.0 0.0 5.507 0.0 0.0 0.0 413.2519014947876 413.2519014947876 42.47933455448525 0.0 0.0 0.0 0 1.079689690656103 1.2218487496163564 0.0 0.0 KE{I|L}{M(Oxidation (M))|F}C 5.507 - 44 + 1 2.325 55636.2 1.0 878 3041 3918 DOHH2_400M_050219_1,3921 DOHH2_400M_050219_1,3921,KEIGTKQSF True True KEIGTKQSF 19.981377 519.285021960735 3750042.0 3918.0 ENSG00000102699|ENST00000381989|PARP4 4.741420110066732 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3922 19.984 146.0 408620.0 25 0 100750.0 + 30386 RAMIAAGE 8 88 409.7132930478657 817.4120331625313 2 409.7128478884697 MULTI CID FTMS 0 0 0 3918 261712.78125 0.6381073282145419 -5 0.1247196197509765 4 Unmodified _RAMIAAGE_ ENST00000605386.1_1_12:90103555-90103792:+|nuORF 23.1484247019978 0.5573009939494978 1 {[QV]|[N{I|L}]|[RA]|[KV]}M{I|L}AQE 7 2 + 32.051 0.0 0.0 3.921 3.921 85.25 0.0 0.0 0.0 6.337578905021601 13.313791368665022 6.337578905021601 32.05091642286526 0 0.6989700043360187 0.0 0.0 0.3054621874040891 {[QV]|[N{I|L}]|[RA]|[KV]}M{I|L}AQE 3.921 - 43 1 2.325 51606.2 1.0 879 3041 3918 DOHH2_400M_050219_1,3922 DOHH2_400M_050219_1,3922,RAMIAAGE False False RAMIAAGE 19.984294 409.71284788847 1642698.5 3918.0 ENST00000605386.1_1_12:90103555-90103792:+|nuORF -0.0668274561564127 2.0 True 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 3924 19.992 263.0 204940.0 25 0 37150.0 + 24678 MMDPNSTQRY 10 61 629.7627120141283 1257.5108710950565 2 629.7631103396416 MULTI CID FTMS 0 0 0 3923 214980.875 0.8074318507385783 -2 0.0535411834716796 1 Oxidation (M) _M(Oxidation (M))MDPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 49.52724829834842 0.0829255630816734 1 {M(Oxidation (M))|F}MDPNSTQ[YR] 10 0 + 71.419 0.0 0.0 5.6794 5.6794 85.974 0.0 0.0 0.0 62.1277502416482 5.764837301042718 5.764837301042718 9.164539485499256 0 1.0 0.0 0.3807196863200844 0.4247425010840047 + + {M(Oxidation (M))|F}MDPNSTQ[YR];{M(Oxidation (M))|F}MDPNST[AG][YR];{M(Oxidation (M))|F}MDPGGSTQ[YR];{M(Oxidation (M))|F}MDPGGST[AG][YR];{M(Oxidation (M))|F}MDPN[C(Carbamidomethyl (C))R][YR];{M(Oxidation (M))|F}MDPGG[C(Carbamidomethyl (C))R][YR];{M(Oxidation (M))|F}MYYSTQ[YR];{M(Oxidation (M))|F}MYYST[AG][YR];{M(Oxidation (M))|F}MYY[C(Carbamidomethyl (C))R][YR] 5.6794;4.9506;4.9506;4.2247;3.6055;2.8733;2.8701;2.1379;1.1033 +;-;-;-;-;-;-;-;- + 135 + 1 2.325 46211.9 1.0 880 3042 3923 DOHH2_400M_050219_1,3924 DOHH2_400M_050219_1,3924,MMDPNSTQRY True False MMDPNSTQRY 19.991715 629.763110339642 1177590.125 3923.0 ENSG00000124571|ENST00000265351|XPO5 7.255114078521728 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3925 20.006 800.0 62733.0 25 0 5762.1 + 10487 FTSDEDVIYY 10 86 626.2733861961472 0 626.2731811404228 PEAK CID FTMS 0 0 0 3923 45429.5546875 0.5321492284408467 1 -0.0366783142089843 2 Unmodified _FTSDEDVIYY_ REV__ENSG00000183090|ENST00000329798|FREM3 14.838274106304384 0.3381107837965078 1 TDE 3 -1 20.445 0.0 0.0 1.6349 0.0 0.0 147.0723825583603 755.3238619440061 902.3962445023664 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 TDE 1.6349 - 88 + 1 2.325 41998.5 0.4799999892711639 881 3042 3923 DOHH2_400M_050219_1,3925 DOHH2_400M_050219_1,3925,FTSDEDVIYY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3926 20.013 435.0 290060.0 25 0 39552.0 + 23469 LTGWPLTMK 9 108 531.783976473968 1061.553400014736 2 531.7846557497978 MULTI CID FTMS 0 0 0 3923 137927.546875 0.0713761813012089 -11 0.2479095458984375 3 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 45.69961567697781 0.0497987121815769 1 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K 9 -1 + 52.201 0.0 0.0 4.9174 4.9174 82.194 0.0 0.0 0.0 2.442190502882156 33.72872192056825 2.442190502882156 8.15121654661148 0 1.805462187404089 0.0 0.8252574989159953 0.3252574989159953 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;[KT]T[HS]{I|L}T{M(Oxidation (M))|F}K;[TA]{[RE]|[WV]}P{I|L}T{M(Oxidation (M))|F}K;[KT]T{[TV]|[{I|L}S]}HGVGY;[KT]T[{I|L}P]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K;[HT]VG{I|L}P[Y{I|L}]Y;[KT]T[HS]{I|L}GVGY;[TA]{[RE]|[WV]}P{I|L}GVGY;[PS]{[TV]|[{I|L}S]}[RV]E{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]HRGY 4.9174;4.1496;4.0642;2.6532;2.5874;2.334;1.8854;1.7999;1.3704;1.2389 -;-;-;-;-;-;-;-;-;- 721 1 2.325 100579.1 1.0 882 3042 3923 DOHH2_400M_050219_1,3926 DOHH2_400M_050219_1,3926,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3927 20.021 430.0 191300.0 25 0 42849.0 + 7232 EERRKYTL 8 89 547.8012665007001 1093.5879800682 2 547.8015624880791 MULTI CID FTMS 0 0 0 3923 120958.9296875 0.960405311043306 -3 0.0893115997314453 4 Unmodified _EERRKYTL_ ENSG00000140259|ENST00000267812|MFAP1 8.745405648335112 0.7712480472641603 1 EE 2 6 28.416 0.0 0.0 2.5985 0.0 0.0 0.0 832.4808690070995 832.4808690070995 10.457574905606752 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 + EE 2.5985 + + 57 + 1 2.325 67915.8 1.0 883 3042 3923 DOHH2_400M_050219_1,3927 DOHH2_400M_050219_1,3927,EERRKYTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3930 20.031 179.0 643020.0 25 0 60685.0 + 7563 EIKKRFRQL 9 85 406.5874936358049 1216.7406515076148 3 406.5872985720634 MULTI CID FTMS 0 0 0 3929 245906.984375 0.1718642243921104 -8 0.1772747039794922 1 Unmodified _EIKKRFRQL_ ENSG00000126698|ENST00000263697|DNAJC8;ENST00000482674.5_1_1:28537058-28559509:-|nuORF;ENST00000488868.1_1_1:28537058-28556683:-|nuORF;ENST00000489277.5_1_1:28527761-28556683:-|nuORF 22.736283301280096 0.2418982879461534 1 Q{I|L} 2 7 25.635 0.0 0.0 2.1069 0.0 0.0 957.588324299402 0.0 957.588324299402 0.0 12.27037756330658 0.0 0.0 0 0.1923877696554315 0.0 0.0 0.4247425010840047 + Q{I|L} 2.1069 + + 126 1 2.331 96886.4 1.0 884 3044 3929 DOHH2_400M_050219_1,3930 DOHH2_400M_050219_1,3930,EIKKRFRQL False True EIKKRFRQL 20.031004 406.587298572063 14347130.0 3929.0 ENSG00000126698|ENST00000263697|DNAJC8;;ENST00000488868.1_1_1:28537058-28556683:-|nuORF;;ENST00000489277.5_1_1:28527761-28556683:-|nuORF;;ENST00000482674.5_1_1:28537058-28559509:-|nuORF 3.444834550221761 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3931 20.035 212.0 322120.0 25 0 51853.0 + -1 QQIQKVVM 8 109 495.2747924755844 0 495.2755615115166 PEAK CID FTMS 0 0 0 3929 173647.578125 0.8754774737629206 -2 0.0407066345214843 2 Oxidation (M) _QQIQKVVM(Oxidation (M))_ ENST00000550578.1_1_12:53547103-53547616:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENSG00000161960|ENST00000293831|EIF4A1;nc|ENSG00000161960|P60842-2|EIF4A1;ENST00000578324.5_1_17:7477602-7481249:+|nuORF 32.116972079565 0.2111542247894177 1 {I|L}Q 2 -1 12.664 0.0 0.0 1.281 0.0 0.0 256.1140858283189 488.2551058404906 744.3691916688095 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.3807196863200844 {I|L}Q 1.281 + + 93 + 1 2.331 55375.7 1.0 885 3044 3929 DOHH2_400M_050219_1,3931 DOHH2_400M_050219_1,3931,QQIQKVVM False False QQIQKVVM 20.03501 495.275561511517 5991215.0 3929.0 ENST00000550578.1_1_12:53547103-53547616:+|nuORF;;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF 5.217029094696045 2.0 True 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3934 20.044 62.0 1182000.0 25 0 386340.0 37037 TGARSPAL 8 86 386.7191524696907 771.4237520061814 2 386.7192260622978 MULTI CID FTMS 0 0 0 3933 748817.375 0.6053878307176667 -7 0.1440620422363281 1 Unmodified _TGARSPAL_ ENST00000546571.5_1_12:109124172-109124316:-|nuORF 24.020572477871973 0.5389365498350341 1 A{I|L} 2 6 24.196 0.0 0.0 3.1365 0.0 0.0 569.2953358380875 0.0 569.2953358380875 0.0 7.206225184280797 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + A{I|L} 3.1365 + + 41 1 2.331 63964.3 1.0 886 3046 3933 DOHH2_400M_050219_1,3934 DOHH2_400M_050219_1,3934,TGARSPAL False True TGARPSAL 20.043829 386.719226062298 5557501.0 3933.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 0.4210378006100654 2.0 False 8.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3935 20.055 620.0 194490.0 25 0 10458.0 + 5153 DIKFVAPI 8 140 451.7694632035105 0 451.7697021365166 PEAK CID FTMS 0 0 0 3933 90982.046875 0.2967890204722894 -7 0.1440620422363281 2 Unmodified _DIKFVAPI_ REV__CON__P02754 30.22481116460888 0.2280668331718824 1 {I|L}K 2 -1 18.029 0.0 0.0 1.9998 0.0 0.0 115.02834733589494 542.2948070020318 657.3231543379268 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.3807196863200844 {I|L}K 1.9998 + + 50 + 1 2.331 95736.3 1.0 887 3046 3933 DOHH2_400M_050219_1,3935 DOHH2_400M_050219_1,3935,DIKFVAPI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3938 20.064 75.0 861540.0 25 0 123080.0 + 17657 KPTGARPSAL 10 61 499.29332502733297 996.572097121466 2 499.2933532595634 MULTI CID FTMS 0 0 0 3937 797242.9375 0.7993823845293948 -1 0.0039615631103515 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 27.22323531849824 0.3570408936368626 1 KPTG 4 6 49.68 0.0 0.0 4.9851 0.0 0.0 0.0 610.3320406549436 610.3320406549436 38.84301985621245 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 + KPTG 4.9851 + + 26 + 1 2.331 54058.0 1.0 888 3048 3937 DOHH2_400M_050219_1,3938 DOHH2_400M_050219_1,3938,KPTGARPSAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3939 20.078 800.0 151390.0 25 0 12316.0 + -1 SSQCCSSEY 9 131 525.6773886384551 1049.34022434371 2 525.6774780154228 MULTI CID FTMS 0 0 0 3937 61265.52734375 0.6103690123206474 1 -0.0186653137207031 2 Carbamidomethyl (C) _SSQC(Carbamidomethyl (C))CSSEY_ REV__ENSG00000103528|ENST00000355377|SYT17 6.2057823575117 0.6980434486082533 1 Y 1 -1 18.411 0.0 0.0 1.7546 0.0 0.0 868.2665071579664 0.0 868.2665071579664 0.0 5.83748467625397 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 Y 1.7546 + + 201 + 1 2.331 99548.9 0.5600000023841858 889 3048 3937 DOHH2_400M_050219_1,3939 DOHH2_400M_050219_1,3939,SSQCCSSEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3941 20.094 800.0 26837.0 25 0 2201.2 -1 0 39 874.6428025838001 4368.177630586 5 875.0447265505791 MULTI CID FTMS 0 0 0 -1 0 1 1 W[Y{M(Oxidation (M))|F}] 3 -1 10.458 0.0 0.0 0.2394 0.0 0.0 3853.942513842613 0.0 3853.942513842613 0.0 10.45757490560675 0.0 0.0 0 0.0 0.0 0.0 0.0 W[Y{M(Oxidation (M))|F}] 0.2394 - 1 1 2.331 27800.0 0.3700000047683716 890 3049 3940 DOHH2_400M_050219_1,3941 DOHH2_400M_050219_1,3941, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3942 20.097 135.0 590450.0 25 0 44167.0 + 4768 DEKRDFRTY 9 98 410.5351653134017 1228.5836665404051 3 410.5350829958916 MULTI CID FTMS 0 0 0 3940 307806.8125 0.411265715546674 -3 0.0385932922363281 2 Unmodified _DEKRDFRTY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF 51.41523569358685 0.0372669606867193 1 DEKRD{M(Oxidation (M))|F}RTY 9 0 + 79.925 0.0 0.0 6.5054 6.5054 90.883 0.0 0.0 0.0 31.96272488392665 10.389180660303694 10.389180660303694 10.389180660303694 0 0.535666875892183 1.6989700043360187 0.5 0.3807196863200844 + + DEKRD{M(Oxidation (M))|F}RTY;DEKRDYT[R{M(Oxidation (M))|F}];DEKRD[HV][PA]Y;DEKR{[MS]|[{M(Oxidation (M))|F}A]}{[TV]|[{I|L}S]}TY;DEK[VG]D[HV]H{[HG]|PP};DEK[WQ][HK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};WWRD[HV]H{[HG]|PP} 6.5054;5.6598;5.0064;4.2942;3.8438;2.8846;0.69902 +;-;-;-;-;-;- + 296 + 1 2.331 68397.7 1.0 891 3049 3940 DOHH2_400M_050219_1,3942 DOHH2_400M_050219_1,3942,DEKRDFRTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3943 20.103 324.0 357960.0 25 0 43842.0 + 5132 DIHKKMVV 8 119 485.2817668254913 968.5489807177828 2 485.2827026247978 MULTI CID FTMS 0 0 0 3940 108450.2578125 0.207748692324942 -4 0.0426158905029296 3 Unmodified _DIHKKMVV_ ENSG00000221823|ENST00000234310|PPP3R1 56.17704186161178 0.1143274477948619 1 D{I|L}HK 4 4 50.438 0.0 0.0 5.2076 0.0 0.0 0.0 472.2565706842407 472.2565706842407 21.302564712979617 0.0 0.0 0.0 0 1.079689690656103 2.0 0.0 0.0 + D{I|L}HK 5.2076 + + 422 + 1 2.331 95238.0 1.0 892 3049 3940 DOHH2_400M_050219_1,3943 DOHH2_400M_050219_1,3943,DIHKKMVV True True DIHKKMVV 20.102619 485.282702624798 2218821.5 3940.0 ENSG00000221823|ENST00000234310|PPP3R1 4.842764377593994 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3946 20.115 314.0 425370.0 25 0 88513.0 + 8536 ETERTRNLY 9 107 394.5354129966099 1180.5844095900295 3 394.5351135134697 MULTI CID FTMS 0 0 0 3945 160878.078125 0.8281324298047331 1 -0.0497608184814453 1 Unmodified _ETERTRNLY_ ENSG00000101343|ENST00000536226|CRNKL1;ENST00000521379.1_1_20:20018163-20019094:-|nuORF;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 10.799506525563784 0.5443532743200366 1 Y 1 8 14.604 0.0 0.0 1.237 0.0 0.0 999.5100973115126 0.0 999.5100973115126 0.0 1.4165061435177506 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.237 + + 58 + 1 2.331 107030.8 1.0 893 3051 3945 DOHH2_400M_050219_1,3946 DOHH2_400M_050219_1,3946,ETERTRNLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3947 20.129 800.0 244670.0 25 0 66907.0 7565 EIKKRFRQL 9 91 609.37747845891 1216.74040398462 2 609.3777953982353 MULTI CID FTMS 0 0 0 3945 162175.1875 0.9075563562710696 -1 0.004159927368164 2 Unmodified _EIKKRFRQL_ ENSG00000126698|ENST00000263697|DNAJC8;ENST00000482674.5_1_1:28537058-28559509:-|nuORF;ENST00000488868.1_1_1:28537058-28556683:-|nuORF;ENST00000489277.5_1_1:28527761-28556683:-|nuORF 14.838274106304384 0.4350285940865338 1 KK{I|L}Q 4 6 22.652 0.0 0.0 1.8617 0.0 0.0 701.3995228498062 0.0 701.3995228498062 0.0 3.187587626244124 0.0 0.0 0 0.0 0.0 0.0 0.0 KK{I|L}Q 1.8617 - 63 1 2.331 145438.8 0.7099999785423279 894 3051 3945 DOHH2_400M_050219_1,3947 DOHH2_400M_050219_1,3947,EIKKRFRQL False True ASAPVSGAGNHSY 20.128883 609.377795398235 0.0 3945.0 nc|ENSG00000100100|Q96FE7-2|PIK3IP1;;nc|ENSG00000100100|Q96FE7-4|PIK3IP1;;ENSG00000100100|ENST00000215912|PIK3IP1 4.406370162963867 2.0 False 13.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3948 20.143 800.0 150630.0 25 0 9655.9 17717 KPVGFTVHAI 10 138 534.8115335933727 1067.6085142535453 2 534.8118163943291 MULTI CID FTMS 0 0 0 3945 134746.0 0.3119971682088023 10 -0.2433700561523437 3 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 24.020572477871973 0.4289996903560794 1 KPT 3 7 38.06 0.0 0.0 3.5649 0.0 0.0 0.0 738.3912454689048 738.3912454689048 20.31743128760553 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 KPT 3.5649 - 214 + 1 2.331 97240.5 0.6700000166893005 895 3051 3945 DOHH2_400M_050219_1,3948 DOHH2_400M_050219_1,3948,KPVGFTVHAI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3949 20.157 800.0 201840.0 25 0 46107.0 + 4769 DEKRDFRTY 9 100 615.2995115815932 1228.5844702299862 2 615.2989990115166 MULTI CID FTMS 0 0 0 3945 130538.8984375 0.630559013589962 -2 0.0291481018066406 4 Unmodified _DEKRDFRTY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF 59.05245873256422 0.0266066919017776 1 DE[RK]D{M(Oxidation (M))|F}RTY 9 0 + 84.95 0.0 0.0 6.9145 6.9145 93.617 0.0 0.0 0.0 57.95548148589354 14.973024840566469 14.973024840566469 16.46591250700361 0 2.004432191740108 1.2218487496163564 0.6307196863200843 0.3807196863200844 + + DE[RK]D{M(Oxidation (M))|F}RTY;DE[KA]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RTY;DE[RK]DY[H{I|L}][PG];DE[KA][{M(Oxidation (M))|F}V]TRTY;DE[RK]GDE{[QV]|[N{I|L}]|[RA]|[KV]}[PG];DE[RK]DW{[QV]|[N{I|L}]|[RA]|[KV]}[PG];DE[RK]DGE{[QV]|[N{I|L}]|[RA]|[KV]}[PG];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]D{M(Oxidation (M))|F}RTY;[TA]{[QV]|[N{I|L}]|[RA]|[KV]}ED{M(Oxidation (M))|F}RTY;{[ES]|[DT]|[{I|L}C]}RRD{M(Oxidation (M))|F}RTY 6.9145;5.5742;4.6165;4.5339;4.2744;4.1264;4.0709;2.4212;2.3091;2.1159 +;-;-;-;-;-;-;+;-;- + 475 + 1 2.331 121225.6 0.6399999856948853 896 3051 3945 DOHH2_400M_050219_1,3949 DOHH2_400M_050219_1,3949,DEKRDFRTY True True DEKRDFRTY 20.156556 615.298999011517 4116045.0625 3945.0 ENST00000562272.5_1_16:23691188-23701381:+|nuORF;;ENSG00000166851|ENST00000300093|PLK1 8.189070065816244 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3951 20.161 14.0 3291800.0 25 0 222310.0 + 35223 SSDPYHSGY 9 73 506.70406562519815 1011.3935783171964 2 506.7043945193291 MULTI CID FTMS 0 0 0 3950 3753471.5 0.7379608591710888 6 -0.1542224884033203 1 Unmodified _SSDPYHSGY_ ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT 67.34385681178166 0.0221257235307089 1 {[CA]|SS}DPY[HT]D 8 3 34.601 0.0 0.0 3.4211 0.0 0.0 0.0 106.04169641666248 106.04169641666248 10.109557476958688 0.0 0.0 0.0 0 0.805462187404089 0.0 1.1307196863200843 0.0 {[CA]|SS}DPY[HT]D 3.4211 - 242 + 1 2.327 44210.6 1.0 897 3052 3950 DOHH2_400M_050219_1,3951 DOHH2_400M_050219_1,3951,SSDPYHSGY True True SSDPYHSGY 20.161333 506.704394519329 86103630.0 3950.0 nc|ENSG00000087087|Q9BXP5-5|SRRT;;nc|ENSG00000087087|Q9BXP5-3|SRRT;;nc|ENSG00000087087|Q9BXP5-4|SRRT;;nc|ENSG00000087087|Q9BXP5-2|SRRT;;ENSG00000087087|ENST00000611405|SRRT 8.389651457468668 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3952 20.164 134.0 193780.0 25 0 12165.0 + 38472 TSDLQDKNEY 10 58 606.772723888243 1211.530894843286 2 606.7731201052666 MULTI CID FTMS 0 0 0 3950 382028.0625 0.2863527698800752 9 -0.1936092376708984 2 Unmodified _TSDLQDKNEY_ ENSG00000075188|ENST00000552283|NUP37;ENST00000551200.5_1_12:102471044-102512308:-|nuORF 47.594388314883695 0.0942698883389255 1 EY 2 8 21.766 0.0 0.0 1.7966 0.0 0.0 901.4144154279312 0.0 901.4144154279312 0.0 5.440228147639203 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + EY 1.7966 + + 62 1 2.327 26096.6 1.0 898 3052 3950 DOHH2_400M_050219_1,3952 DOHH2_400M_050219_1,3952,TSDLQDKNEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3954 20.17 172.0 341400.0 25 0 64805.0 + 37207 TIIDKSKSV 9 89 495.7955425973918 989.5765322615836 2 495.7954284548759 MULTI CID FTMS 0 0 0 3953 282817.15625 1.0 0 0.0 1 Unmodified _TIIDKSKSV_ ENSG00000112972|ENST00000325110|HMGCS1;ENST00000507004.1_1_5:43298575-43313480:-|nuORF;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 29.84058131909904 0.1515068451768857 1 [{I|L}T]{I|L}DKSKSV 9 0 + 60.306 0.0 0.0 6.0941 6.0941 91.484 0.0 0.0 0.0 30.901110827039304 9.186749122038549 9.186749122038549 17.382287586051106 0 0.4247425010840047 2.0 0.6549471895720985 0.0 + + [{I|L}T]{I|L}DKSKSV;[{I|L}T]AASKSV[{I|L}T];[{I|L}T][QT]KSV[{I|L}T];[VS]G{I|L}SKSV[{I|L}T];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}SKSV[{I|L}T];{NN|[MP]|[D{I|L}]|[EV]}KSKSV[{I|L}T];[{I|L}T]{I|L}[HK][PG][QP];[{I|L}T]{I|L}[HK][NP][PA];[{I|L}T]{I|L}[HK][PG]G[PA];{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]{I|L}V[{I|L}T] 6.0941;4.3376;3.9817;2.4439;2.0514;1.7121;1.6247;1.4985;1.3722;1.2189 +;-;-;-;-;-;-;-;-;- + 352 + 1 2.327 50373.1 1.0 899 3053 3953 DOHH2_400M_050219_1,3954 DOHH2_400M_050219_1,3954,TIIDKSKSV False True TIIDKSKSV 20.169872 495.795428454876 1113722.625 3953.0 ENST00000507004.1_1_5:43298575-43313480:-|nuORF;;ENSG00000112972|ENST00000325110|HMGCS1;;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 4.752219518025716 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3955 20.176 346.0 163050.0 25 0 11239.0 + 11155 GEKQINQEY 9 87 554.7664637070343 1107.5183744808685 2 554.7678710818291 MULTI CID FTMS 0 0 0 3953 219992.671875 1.0 0 0.0 2 Unmodified _GEKQINQEY_ ENSG00000144034|ENST00000272424|TPRKB;ENST00000463231.5_1_2:73956300-73964442:-|nuORF;ENST00000489476.5_1_2:73956300-73964431:-|nuORF;ENST00000497464.5_1_2:73957656-73964442:-|nuORF;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB 38.17557092003332 0.0854718145212029 1 {[DA]|[EG]}KQ{I|L}NQEY 9 0 + 48.795 0.0 0.0 4.4058 4.4058 78.859 0.0 0.0 0.0 6.487803220352362 11.0827208845118 6.487803220352362 6.487803220352362 0 0.3935078169319297 1.3010299956639813 0.3494850021680094 0.5501648626366046 + + {[DA]|[EG]}KQ{I|L}NQEY;{[QN]|[E{I|L}]|[KN]}{I|L}S{I|L}NQEY;{[DA]|[EG]}A[KG]{I|L}NQEY;{[DA]|[EG]}KQ{I|L}GGQEY;{[DA]|[EG]}K[AG]{I|L}NQEY;{[DA]|[EG]}KQ{I|L}N[AG]EY;{[QN]|[E{I|L}]|[KN]}{I|L}S{I|L}GGQEY;{[QN]|[E{I|L}]|[KN]}{I|L}S{I|L}N[AG]EY;{[DA]|[EG]}A[KG]{I|L}GGQEY;{[DA]|[EG]}A[KG]{I|L}N[AG]EY 4.4058;3.82;3.7029;3.5744;3.5744;3.5744;2.9886;2.9886;2.8754;2.8754 +;-;-;-;-;-;-;-;-;- + 301 1 2.327 45419.8 1.0 900 3053 3953 DOHH2_400M_050219_1,3955 DOHH2_400M_050219_1,3955,GEKQINQEY True True GEKQINQEY 20.176137 554.767871081829 973099.9375 3953.0 ENST00000463231.5_1_2:73956300-73964442:-|nuORF;;nc|ENSG00000144034|Q9Y3C4-3|TPRKB;;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;;ENST00000489476.5_1_2:73956300-73964431:-|nuORF;;ENSG00000144034|ENST00000272424|TPRKB;;ENST00000497464.5_1_2:73957656-73964442:-|nuORF 4.715725580851237 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3956 20.181 259.0 325430.0 25 0 19024.0 + 7108 EEMGHAETY 9 124 533.7108812950897 1065.4072096569794 2 533.7114745974541 MULTI CID FTMS 0 0 0 3953 223208.609375 0.8371055972948881 -2 0.0572052001953125 3 Unmodified _EEMGHAETY_ ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1 77.98433622928108 0.0180125044636492 1 [Y{M(Oxidation (M))|F}]EETC{M(Oxidation (M))|F}K 8 8 + 40.993 0.0 0.0 3.8477 3.8477 52.78 0.0 0.0 0.0 14.245794800744244 1.307748267658262 1.307748267658262 0.0 0 0.0 2.0 0.7742275032520141 0.1549471895720985 [Y{M(Oxidation (M))|F}]EETC{M(Oxidation (M))|F}K;[Y{M(Oxidation (M))|F}]ETEC{M(Oxidation (M))|F}K;[Y{M(Oxidation (M))|F}]TEEC{M(Oxidation (M))|F}K;[Y{M(Oxidation (M))|F}]EA{[ET]|[MV]}[SG]Y;[Y{M(Oxidation (M))|F}]EETCG{[MS]|[{M(Oxidation (M))|F}A]};[Y{M(Oxidation (M))|F}]ETECG{[MS]|[{M(Oxidation (M))|F}A]};[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[DP]A[SG]Y;[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}A[DP][SG]Y;[Y{M(Oxidation (M))|F}]EA{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}K;[Y{M(Oxidation (M))|F}]TEECG{[MS]|[{M(Oxidation (M))|F}A]} 3.8477;3.8477;3.4238;3.36;3.1543;3.1543;3.0345;2.7519;2.7412;2.7305 -;-;-;-;-;-;-;-;-;- 1294 + 1 2.327 69193.5 1.0 901 3053 3953 DOHH2_400M_050219_1,3956 DOHH2_400M_050219_1,3956,EEMGHAETY True True EEMGHAETY 20.180951 533.7118 1211068.5 3953.0 nc|ENSG00000139697|A3KN83-3|SBNO1;;nc|ENSG00000139697|A3KN83-4|SBNO1;;ENSG00000139697|ENST00000602398|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1 8.099604288736979 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3957 20.186 266.0 300410.0 25 0 32782.0 + + -1 DSDRYRDGYRDGY 13 78 546.5693586388229 1636.6862465166687 3 546.5697509646416 MULTI CID FTMS 0 0 0 3953 220013.78125 1.0 0 0.0 4 Carbamidomethyl (C) _HRWHWC(Carbamidomethyl (C))SRCFY_ ENSG00000063046|ENST00000262056|EIF4B;nc|ENSG00000063046|P23588-2|EIF4B 0.0948413911109767 0.8747004676205551 1 DSDRQQDN 8 -1 46.956 0.0 0.0 2.8689 0.0 0.0 0.0 675.2884005182249 675.2884005182249 27.491596866368013 0.0 0.0 0.0 0 1.0924778212679485 1.3010299956639813 0.0 0.0 DSDRQQDN 2.8689 - 140 + 1 2.327 65720.5 1.0 902 3053 3953 DOHH2_400M_050219_1,3957 DOHH2_400M_050219_1,3957,HRWHWCSRCFY False False DSDRYRDGYRDGY 20.185884 546.569750964642 891622.625 3953.0 ENSG00000063046|ENST00000262056|EIF4B;;nc|ENSG00000063046|P23588-2|EIF4B 6.981749375661214 3.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3958 20.198 722.0 252250.0 25 0 40756.0 + 26311 NRIIKNEV 8 149 493.2932108042297 984.5718686752596 2 493.2944213747978 MULTI CID FTMS 0 0 0 3953 114478.71875 0.3246339081118798 -3 0.0613651275634765 5 Unmodified _NRIIKNEV_ ENSG00000188846|ENST00000396203|RPL14 61.357469665136826 0.1155423183535659 1 [RN]{I|L}{I|L}KNEV 8 0 + 57.776 0.0 0.0 5.8682 5.8682 88.363 0.0 0.0 0.0 10.400990676322904 40.61060305612386 10.400990676322904 9.262137858390808 0 0.7404443404078203 0.0 0.0 1.3539171939081172 + + [RN]{I|L}{I|L}KNEV;[RN]{I|L}{I|L}KGGEV;[AG][RV]{I|L}KNEV;[AG][RV]{I|L}KGGEV;[RN]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[Q{I|L}]V;{[QD]|[EN]|[WG]|[KD]|[RS]}K[RV][Q{I|L}]V;V{M(Oxidation (M))|F}N[VG]KK{[HG]|PP};[AG]DK[RV][Q{I|L}]V 5.8682;4.9274;4.2761;3.3409;1.6594;1.3;1.1574;1.1323 +;-;-;-;-;-;-;- + 269 1 2.327 141078.0 1.0 903 3053 3953 DOHH2_400M_050219_1,3958 DOHH2_400M_050219_1,3958,NRIIKNEV True True NRIIKNEV 20.198395 493.294421374798 1581397.0 3953.0 ENSG00000188846|ENST00000396203|RPL14 5.167818387349446 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3960 20.203 44.0 1089800.0 25 0 160100.0 -1 RSIMHCVAL 9 72 543.7803602892399 1085.5461676452796 2 543.7809326052666 MULTI CID FTMS 0 0 0 3959 1181543.75 0.6048307886632339 3 -0.0974349975585937 1 Carbamidomethyl (C) _RSIMHC(Carbamidomethyl (C))VAL_ ENST00000548847.1_1_12:98989513-98989567:+|nuORF 9.347437153973935 0.588369872918737 1 [QP]QDT[WK]A{I|L} 9 -1 + 37.101 0.0 0.0 3.4177 3.4177 79.859 0.0 0.0 0.0 19.141974908773925 12.140012553530973 12.140012553530973 9.208187539523756 0 0.0 0.0 0.4247425010840047 0.0 [QP]QDT[WK]A{I|L};[QP][AG]DT[WK]A{I|L};[QP]Q[RV][RD]{[MG]|[TS]} 3.4177;2.5695;0.4706 -;-;- 66 + 1 2.327 44588.0 1.0 904 3054 3959 DOHH2_400M_050219_1,3960 DOHH2_400M_050219_1,3960,RSIMHCVAL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3961 20.217 800.0 89751.0 25 0 6245.6 + 38530 TSQSKYATIE 10 106 564.2854025303633 0 564.2812377810478 PEAK CID FTMS 0 0 0 3959 82993.3828125 0.8907876376254625 1 -0.0258293151855468 2 Unmodified _TSQSKYATIE_ REV__ENST00000534334.5_1_1:76190495-76194150:+|nuORF 8.745405648335112 0.3843311602926832 1 {I|L}G 2 -1 8.5835 0.0 0.0 0.76192 0.0 0.0 393.13139968787647 560.2890808031657 953.420480491042 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}G 0.76192 - 17 + 1 2.327 60998.2 0.4699999988079071 905 3054 3959 DOHH2_400M_050219_1,3961 DOHH2_400M_050219_1,3961,TSQSKYATIE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3962 20.221 232.0 342030.0 25 0 33538.0 7360 EGANKMMKDLE 11 88 422.5352213008448 1264.5838345027344 3 422.5349304080009 MULTI CID FTMS 0 0 0 3959 143655.375 0.4872804918923537 -2 0.0418510437011718 3 Unmodified _EGANKMMKDLE_ ENSG00000079739|ENST00000371084|PGM1;nc|ENSG00000079739|P36871-2|PGM1;nc|ENSG00000079739|P36871-3|PGM1 12.240655878213236 0.7805268987462184 1 {[DA]|[EG]}A{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]YY[VG]G 11 7 + 30.912 0.0 0.0 2.4445 2.4445 79.122 0.0 0.0 0.0 0.9072980820389418 17.813438736681753 0.9072980820389418 12.526301296056957 0 0.5 1.6989700043360187 0.3807196863200844 0.0 {[DA]|[EG]}A{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]YY[VG]G;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]YYRG;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ][KG]YYRG;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]YY[VG]G;[KC]YY[KG]TQQ{M(Oxidation (M))|F} 2.4445;1.4539;0.82456;0.72576;0.15381 -;-;-;-;- 211 1 2.327 69564.9 1.0 906 3054 3959 DOHH2_400M_050219_1,3962 DOHH2_400M_050219_1,3962,EGANKMMKDLE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3963 20.224 141.0 387870.0 25 0 38749.0 7342 EFSRATAEK 9 84 519.7648357471384 0 519.7645751833916 PEAK CID FTMS 0 0 0 3959 198332.34375 0.8770648381247615 2 -0.0734214782714843 4 Unmodified _EFSRATAEK_ ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1 19.361941925380144 0.2068558026293938 1 EMV 3 8 20.291 0.0 0.0 1.9558 0.0 0.0 146.10790528158287 529.2263277643186 675.3342330459016 0.0 0.0 0.0 0.0 0 1.1329131673969606 0.0 0.0 0.0 EMV 1.9558 - 28 + 1 2.327 47884.9 1.0 907 3054 3959 DOHH2_400M_050219_1,3963 DOHH2_400M_050219_1,3963,EFSRATAEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3965 20.23 183.0 361180.0 25 0 33253.0 + -1 AETEPIVKM 9 98 517.2655626124262 1032.5165722916522 2 517.2653686404228 MULTI CID FTMS 0 0 0 3964 263368.9375 1.0 0 0.0 1 Oxidation (M) _AETEPIVKM(Oxidation (M))_ ENST00000518442.5_1_8:109247181-109261015:-|nuORF;ENSG00000104408|ENST00000220849|EIF3E 34.40172386719151 0.1061884637610825 1 {[CP]|[EA]}TE[{I|L}P]VK{M(Oxidation (M))|F} 9 -1 + 41.348 0.0 0.0 4.0046 4.0046 75.556 0.0 0.0 0.0 7.147642715192504 4.191293077419751 4.191293077419751 4.191293077419751 0 0.8494850021680094 0.0 0.0 0.0 {[CP]|[EA]}TE[{I|L}P]VK{M(Oxidation (M))|F};{[CP]|[EA]}TE[{I|L}P]V{M(Oxidation (M))|F}K;{[CP]|[EA]}T[KS]SKADP;{[CP]|[EA]}T[KS]SKEGP;{[CP]|[EA]}TKS[KS][WP];[TA]EKS[KS][WP];{[ET]|[MV]}AKS[KS][WP];{[CP]|[EA]}TE[Q{I|L}]{[QS]|[NT]}K;{[CP]|[EA]}T[KS]S[WP]K;{[CP]|[EA]}T[KS]S{[QV]|[N{I|L}]|[RA]|[KV]}SP 4.0046;3.5987;2.7258;2.6005;2.3071;1.7969;1.6566;1.6121;1.5367;1.3812 +;-;-;-;-;-;-;-;-;- + 351 + 1 2.327 57977.7 1.0 908 3055 3964 DOHH2_400M_050219_1,3965 DOHH2_400M_050219_1,3965,AETEPIVKM False False AETEPIVKM 20.23032 517.265368640423 2506750.5 3964.0 ENST00000518442.5_1_8:109247181-109261015:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 7.440392971038818 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 3966 20.244 800.0 87523.0 25 0 10908.0 + 8537 ETERTRNLY 9 93 591.300100687501 1180.5856484418018 2 591.2993652224541 MULTI CID FTMS 0 0 0 3964 30132.787109375 0.3148450033966066 3 -0.0865421295166015 2 Unmodified _ETERTRNLY_ ENSG00000101343|ENST00000536226|CRNKL1;ENST00000521379.1_1_20:20018163-20019094:-|nuORF;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 12.240655878213236 0.5053430591993562 1 Y 1 8 13.979 0.0 0.0 1.1841 0.0 0.0 999.5114887511752 0.0 999.5114887511752 0.0 3.521825181113625 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1841 + + 19 + 1 2.327 56621.0 0.4799999892711639 909 3055 3964 DOHH2_400M_050219_1,3966 DOHH2_400M_050219_1,3966,ETERTRNLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3967 20.258 800.0 150960.0 25 0 38883.0 3946 DALLKEDDPSY 11 88 633.2989666498571 1264.583380366514 2 633.3005248904228 MULTI CID FTMS 0 0 0 3964 92424.984375 0.6509742219579039 -2 0.0602359771728515 3 Unmodified _DALLKEDDPSY_ ENSG00000116497|ENST00000373475|S100PBP;ENST00000356689.7_1_1:33290993-33299636:+|nuORF;ENST00000531123.5_1_1:33290993-33299636:+|nuORF;nc|ENSG00000116497|Q96BU1-2|S100PBP 18.373094154950223 0.6529654022026722 1 {[DA]|[EG]}YV 4 9 32.524 0.0 0.0 2.5719 0.0 0.0 0.0 813.3610042280953 813.3610042280953 12.830918867322296 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.5 0.0 {[DA]|[EG]}YV 2.5719 - 173 1 2.327 90648.7 0.5099999904632568 910 3055 3964 DOHH2_400M_050219_1,3967 DOHH2_400M_050219_1,3967,DALLKEDDPSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3968 20.272 800.0 62547.0 25 0 4437.4 -1 CMFIYIKPSAN 11 88 651.8123919581715 1301.6102309831429 2 651.8127929568291 MULTI CID FTMS 0 0 0 3964 108180.8359375 1.0 0 0.0 4 Oxidation (M) _CM(Oxidation (M))FIYIKPSAN_ ENSG00000184954|ENST00000327335|OR6C70 22.65808497894818 0.560183898709508 1 DDPSQSAN 8 -1 76.395 0.0 0.0 5.8693 0.0 0.0 469.29207045722814 0.0 469.29207045722814 0.0 59.40527250276361 0.0 0.0 0 1.3807196863200843 0.0 1.774227503252014 0.0 DDPSQSAN 5.8693 - 370 1 2.327 43858.3 0.5299999713897705 911 3055 3964 DOHH2_400M_050219_1,3968 DOHH2_400M_050219_1,3968,CMFIYIKPSAN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3970 20.277 29.0 1808000.0 25 0 256160.0 + -1 LTGWPLTMK 9 62 531.783976473968 1061.553400014736 2 531.7846557497978 MULTI CID FTMS 0 0 0 3969 1760308.375 0.9109426837983589 3 -0.0479946136474609 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 34.40172386719151 0.1061884637610825 1 T{M(Oxidation (M))|F}K 3 -1 34.169 0.0 0.0 3.2188 0.0 0.0 667.3655165692265 0.0 667.3655165692265 0.0 22.74227503252014 0.0 0.0 0 1.0 0.0 0.0 0.2742275032520141 T{M(Oxidation (M))|F}K 3.2188 + + 60 + 1 2.327 45594.2 1.0 912 3056 3969 DOHH2_400M_050219_1,3970 DOHH2_400M_050219_1,3970,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3971 20.282 269.0 346400.0 25 0 90006.0 + 4774 DELESTNRRY 10 56 641.8044869861108 1281.5944210390214 2 641.8049804568291 MULTI CID FTMS 0 0 0 3969 236963.515625 0.1793766406949984 -12 0.2468185424804687 2 Unmodified _DELESTNRRY_ ENSG00000047315|ENST00000314595|POLR2B 19.986897341741983 0.5121812865880797 1 DEY 3 7 47.167 0.0 0.0 3.6803 0.0 0.0 0.0 871.4390323047924 871.4390323047924 22.15681882079494 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3494850021680094 0.0 DEY 3.6803 - 71 + 1 2.327 73834.9 1.0 913 3056 3969 DOHH2_400M_050219_1,3971 DOHH2_400M_050219_1,3971,DELESTNRRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3972 20.296 800.0 206920.0 25 0 20218.0 + 40802 VLLPKKTSA 9 136 478.8108251689367 955.6070974046734 2 478.8104736208916 MULTI CID FTMS 0 0 0 3969 131363.84375 0.475778400633097 -10 0.2327747344970703 3 Unmodified _VLLPKKTSA_ ENSG00000188486|ENST00000530167|H2AX 38.17557092003332 0.0854718145212029 1 V{I|L}{I|L}PKH 6 4 67.612 0.0 0.0 7.0753 0.0 0.0 0.0 265.1312349908813 265.1312349908813 42.87569308058693 0.0 0.0 0.0 0 1.0356668758921828 1.6989700043360187 0.0 0.0 V{I|L}{I|L}PKH 7.0753 - 614 + 1 2.327 128207.5 0.5400000214576721 914 3056 3969 DOHH2_400M_050219_1,3972 DOHH2_400M_050219_1,3972,VLLPKKTSA True True VLLPKKTSA 20.295824 478.810473620892 1324774.0 3969.0 ENSG00000188486|ENST00000530167|H2AX 5.157645543416341 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3974 20.301 82.0 815280.0 25 0 75158.0 + 7564 EIKKRFRQL 9 53 406.5874936358049 1216.7406515076148 3 406.5874206423759 MULTI CID FTMS 0 0 0 3973 517964.59375 0.3620051028386669 5 -0.0805606842041015 1 Unmodified _EIKKRFRQL_ ENSG00000126698|ENST00000263697|DNAJC8;ENST00000482674.5_1_1:28537058-28559509:-|nuORF;ENST00000488868.1_1_1:28537058-28556683:-|nuORF;ENST00000489277.5_1_1:28527761-28556683:-|nuORF 22.736283301280096 0.2418982879461534 1 E{I|L}KK 4 5 48.404 0.0 0.0 3.9782 0.0 0.0 0.0 715.4001757821111 715.4001757821111 21.05290771543972 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.4247425010840047 + E{I|L}KK 3.9782 + + 30 + 1 2.327 59561.2 1.0 915 3057 3973 DOHH2_400M_050219_1,3974 DOHH2_400M_050219_1,3974,EIKKRFRQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3975 20.302 51.0 1187200.0 25 0 124570.0 + 4758 DEIEWHIVQN 10 73 428.20571808486784 1281.5953248548035 3 428.2056457400322 MULTI CID FTMS 0 0 0 3973 643830.0 0.315004259368087 -10 0.2408218383789062 2 Unmodified _DEIEWHIVQN_ REV__ENSG00000134759|ENST00000358232|ELP2;REV__ENST00000535488.5_1_18:33709896-33718439:+|nuORF;REV__ENST00000540135.5_1_18:33709896-33719635:+|nuORF;REV__ENST00000541190.5_1_18:33709896-33716400:+|nuORF;REV__nc|ENSG00000134759|Q6IA86-2|ELP2;REV__nc|ENSG00000134759|Q6IA86-3|ELP2;REV__nc|ENSG00000134759|Q6IA86-4|ELP2;REV__nc|ENSG00000134759|Q6IA86-5|ELP2;REV__nc|ENSG00000134759|Q6IA86-6|ELP2;REV__nc|ENSG00000134759|Q6IA86-7|ELP2 17.11289562659939 0.5604042439455784 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E 4 -1 24.253 0.0 0.0 1.8924 0.0 0.0 0.0 792.3753668236081 792.3753668236081 17.26280941356464 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E 1.8924 + + 32 + 1 2.327 55345.1 1.0 916 3057 3973 DOHH2_400M_050219_1,3975 DOHH2_400M_050219_1,3975,DEIEWHIVQN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3976 20.311 480.0 216560.0 25 0 19276.0 + 6195 DTERESAVY 9 124 535.2432336985564 1068.4719144639128 2 535.2431518435478 MULTI CID FTMS 0 0 0 3973 140178.140625 0.2112306338585287 -14 0.2748603820800781 3 Unmodified _DTERESAVY_ ENST00000397532.7_1_14:23284899-23285010:-|nuORF 21.53697664764585 0.2571576504437394 1 SAVY 4 5 44.725 0.0 0.0 4.1859 0.0 0.0 630.2609730451187 0.0 630.2609730451187 0.0 35.26084705832169 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 + SAVY 4.1859 + + 165 1 2.327 85384.1 1.0 917 3057 3973 DOHH2_400M_050219_1,3976 DOHH2_400M_050219_1,3976,DTERESAVY False True DTERESAVY 20.310751 535.243151843548 3502833.75 3973.0 ENST00000397532.7_1_14:23284899-23285010:-|nuORF 1.1046335498491924 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3978 20.316 110.0 507600.0 25 0 57620.0 32508 SALKSREL 8 69 452.2670344996477 902.5195160660952 2 452.2666503787041 MULTI CID FTMS 0 0 0 3977 528540.3125 0.5289219296722585 3 -0.0393867492675781 1 Unmodified _SALKSREL_ ENST00000564063.1_1_1:108743279-108743501:+|nuORF 24.020572477871973 0.5389365498350341 1 SA{I|L}KVV{[WT]|[RM]} 8 4 + 57.88 0.0 0.0 6.4132 6.4132 93.98 0.0 0.0 0.0 44.781381439366186 5.440680443502757 5.440680443502757 34.23516269895728 0 0.4247425010840047 1.6989700043360187 0.4247425010840047 0.0 SA{I|L}KVV{[WT]|[RM]};{I|L}SAKVV{[WT]|[RM]};SRRVV{[WT]|[RM]} 6.4132;2.6199;1.1352 -;-;- 62 + 1 2.327 47057.6 1.0 918 3058 3977 DOHH2_400M_050219_1,3978 DOHH2_400M_050219_1,3978,SALKSREL False True SALKRSEL 20.315617 452.266650378704 4157036.25 3977.0 ENSG00000076003|ENST00000264156|MCM6;;chr2:135844681-135846237|13|65.38|0.67|6.61|-|2|None,MCM6|1 2.588209788004557 2.0 False 8.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 3979 20.32 206.0 333420.0 25 0 45295.0 -1 TEQRILMK 8 97 517.7872957712569 0 517.7872192263603 PEAK CID FTMS 0 0 0 3977 193237.890625 0.4151092381690817 -41 0.9896392822265624 2 Oxidation (M) _TEQRILM(Oxidation (M))K_ ENSG00000109466|ENST00000226725|KLHL2;ENST00000509028.1_1_4:166184411-166231758:+|nuORF;nc|ENSG00000109466|O95198-2|KLHL2;nc|ENSG00000109466|O95198-3|KLHL2 23.1484247019978 0.3584660196589264 1 T 1 -1 14.732 0.0 0.0 1.4254 0.0 0.0 293.14403626732 636.3487922528504 929.4928285201704 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 T 1.4254 + + 146 + 1 2.327 58706.0 1.0 919 3058 3977 DOHH2_400M_050219_1,3979 DOHH2_400M_050219_1,3979,TEQRILMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3981 20.328 256.0 244570.0 25 0 26668.0 + 17586 KPTAAFHLL 9 90 499.29332502733297 996.572097121466 2 499.2935058474541 MULTI CID FTMS 0 0 0 3980 200339.6875 0.2008773105119213 10 -0.0878105163574218 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 1 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3533276741031 667.3533276741031 27.91000098699497 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 39 + 1 2.327 51535.2 1.0 920 3059 3980 DOHH2_400M_050219_1,3981 DOHH2_400M_050219_1,3981,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 3982 20.342 800.0 152570.0 25 0 36576.0 + 31828 RTDIARTEY 9 106 562.7882229168963 1123.5618929005925 2 562.7894775271416 MULTI CID FTMS 0 0 0 3980 93183.6875 0.1856899895238413 -19 0.3890609741210937 2 Unmodified _RTDIARTEY_ ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000556791.1_1_14:102499420-102503925:+|nuORF 16.565877749689598 0.3882643987948875 1 [VG]TD 4 8 35.891 0.0 0.0 3.1944 0.0 0.0 0.0 748.3637306610758 748.3637306610758 18.90092514408778 0.0 0.0 0.0 0 1.048455006504028 1.3979400086720375 0.0 0.0 [VG]TD 3.1944 - 158 + 1 2.327 96737.6 0.5 921 3059 3980 DOHH2_400M_050219_1,3982 DOHH2_400M_050219_1,3982,RTDIARTEY False True RTDIARTEY 20.341767 562.789477527142 4726720.0 3980.0 ENSG00000197102|ENST00000360184|DYNC1H1;;ENST00000556791.1_1_14:102499420-102503925:+|nuORF 7.685263315836589 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3983 20.346 231.0 436010.0 25 0 116190.0 -1 0 95 404.24746987980274 403.2401934132028 1 404.2480041384697 MULTI CID FTMS 0 0 0 3980 297661.625 0.6282245474721426 -22 0.4359359741210937 3 1 M 1 -1 10.181 0.0 0.0 2.5248 0.0 0.0 254.1890592352715 0.0 254.1890592352715 0.0 7.082117071830254 0.0 0.0 0 0.0 0.0 0.0 0.0 M 2.5248 - 6 + 1 2.327 81205.1 1.0 922 3059 3980 DOHH2_400M_050219_1,3983 DOHH2_400M_050219_1,3983, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3986 20.367 800.0 57504.0 25 0 10396.0 -1 0 45 585.9444288024407 0 585.9451171755791 PEAK CID FTMS 0 0 0 3985 74869.90625 1.0 0 0.0 1 1 M 1 -1 1.5938 0.0 0.0 0.13624 0.0 0.0 855.7725674017843 180.0441073053344 1035.8166747071186 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.13624 - 1 + 1 2.327 40122.5 0.4600000083446502 923 3061 3985 DOHH2_400M_050219_1,3986 DOHH2_400M_050219_1,3986, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3987 20.376 562.0 158700.0 25 0 60318.0 -1 0 98 495.24057661401673 494.2333001474168 1 495.2408325076103 MULTI CID FTMS 0 0 0 3985 99423.875 0.546514931590384 -11 0.2475299835205078 2 1 Q 1 -1 13.099 0.0 0.0 2.6504 0.0 0.0 348.1638096462433 0.0 348.1638096462433 0.0 2.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 2.6504 - 63 + 1 2.327 70266.3 1.0 924 3061 3985 DOHH2_400M_050219_1,3987 DOHH2_400M_050219_1,3987, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3990 20.388 242.0 249680.0 25 0 16587.0 -1 0 96 457.19451848226186 456.18724201566187 1 457.1939575076103 MULTI CID FTMS 0 0 0 3989 159913.25 0.4860004380175697 10 -0.0566482543945312 1 1 {I|L} 1 -1 10.969 0.0 0.0 2.4045 0.0 0.0 325.0919183846056 0.0 325.0919183846056 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.4045 - 10 + 1 2.327 53937.2 1.0 925 3063 3989 DOHH2_400M_050219_1,3990 DOHH2_400M_050219_1,3990, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 3997 20.414 177.0 342720.0 25 0 49082.0 + 35224 SSDPYHSGY 9 97 506.70406562519815 1011.3935783171964 2 506.7042724490166 MULTI CID FTMS 0 0 0 3996 242541.703125 0.0476855315467145 23 -0.4332752227783203 1 Unmodified _SSDPYHSGY_ ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT 57.47134341890925 0.0274820932774257 1 {[CA]|SS}DPY[HS]GY 9 0 + 34.294 0.0 0.0 3.3907 3.3907 83.108 0.0 0.0 0.0 17.303812643418517 6.718356431693316 6.718356431693316 23.76410021363376 0 0.7742275032520141 0.0 0.75 0.0 + + {[CA]|SS}DPY[HS]GY;{[CA]|SS}D[HT][{M(Oxidation (M))|F}V]GY;{[WN]|[YH]}PSGY{[C(Carbamidomethyl (C))E]|[WC]};{[CA]|SS}[C(Carbamidomethyl (C))K]{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))E]|[WC]} 3.3907;1.0411;0.89493;0.48261 +;-;-;- + 198 + 1 2.327 50770.1 1.0 926 3069 3996 DOHH2_400M_050219_1,3997 DOHH2_400M_050219_1,3997,SSDPYHSGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 3998 20.42 376.0 378290.0 25 0 42585.0 40038 VGGAGNKI 8 150 358.20737032525466 714.4001877173093 2 358.2070800662041 MULTI CID FTMS 0 0 0 3996 181729.6875 0.1776732191294786 -16 0.2436332702636718 2 Unmodified _VGGAGNKI_ ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-3|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1 5.760428011301431 0.7893668129297577 1 E{I|L} 2 7 21.013 0.0 0.0 2.9414 0.0 0.0 454.2660389630875 0.0 454.2660389630875 0.0 10.63481847779105 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 E{I|L} 2.9414 - 58 1 2.327 116471.8 1.0 927 3069 3996 DOHH2_400M_050219_1,3998 DOHH2_400M_050219_1,3998,VGGAGNKI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4001 20.433 333.0 189080.0 25 0 52036.0 + 29653 QNLERGTAV 9 85 494.26460999749 986.51466706178 2 494.2638732790947 MULTI CID FTMS 0 0 0 4000 84323.234375 0.8648332431244614 -1 0.0040626525878906 1 Unmodified _QNLERGTAV_ ENSG00000117614|ENST00000236273|SYF2;nc|ENSG00000117614|O95926-2|SYF2 9.38312468134398 0.5871240394367778 1 V 1 8 13.979 0.0 0.0 1.417 0.0 0.0 869.4352964946887 0.0 869.4352964946887 0.0 -0.6246936830414995 -0.6246936830414995 0.0 0 0.0 0.0 0.0 0.0 + V 1.417 + + 59 + 1 2.327 53384.0 1.0 928 3071 4000 DOHH2_400M_050219_1,4001 DOHH2_400M_050219_1,4001,QNLERGTAV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4008 20.47 800.0 121260.0 25 0 12651.0 + 26376 NTAAWVPSQL 10 116 543.7803602892399 1085.5461676452796 2 543.7802612185478 MULTI CID FTMS 0 0 0 4007 110522.9609375 0.0565765674180274 26 -0.5607433319091797 1 Unmodified _NTAAWVPSQL_ REV__ENSG00000166398|ENST00000299505|GARRE1;REV__ENST00000588974.1_1_19:34839831-34843857:+|nuORF 26.268140514670165 0.3785003716575977 1 [QP]QDT[WK]A{I|L} 9 -1 + 31.497 0.0 0.0 2.9015 2.9015 78.562 0.0 0.0 0.0 15.506114981656912 9.00035782629693 9.00035782629693 9.208187539523752 0 0.6694451763165201 0.0 0.0 0.3252574989159953 [QP]QDT[WK]A{I|L};[QP][AG]DT[WK]A{I|L};[TP]K{[ES]|[DT]|[{I|L}C]}{[MS]|[{M(Oxidation (M))|F}A]}PP{I|L};[KS][KT]Y[{M(Oxidation (M))|F}E]A{I|L};[QP]QDT[RK][DV];[TP]K{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CP]|[EA]}PP{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HM][WQ]P{I|L} 2.9015;2.0532;1.3913;0.86483;0.84379;0.16635;0.042179 -;-;-;-;-;-;- 716 + 1 2.327 77057.2 0.5400000214576721 929 3077 4007 DOHH2_400M_050219_1,4008 DOHH2_400M_050219_1,4008,NTAAWVPSQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4009 20.483 800.0 110940.0 25 0 8609.5 + 33044 SEPSEVRSY 9 105 527.2450563270127 1052.4755597208252 2 527.2456542849541 MULTI CID FTMS 0 0 0 4007 87548.640625 0.8786657346484565 -1 0.0038948059082031 2 Unmodified _SEPSEVRSY_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 24.99096001346401 0.2132109383330889 1 {[ES]|[DT]|[{I|L}C]}PSEV 6 3 24.258 0.0 0.0 2.3048 0.0 0.0 0.0 421.1829012506469 421.1829012506469 7.985775332874279 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}PSEV 2.3048 + + 152 + 1 2.327 73839.8 0.4699999988079071 930 3077 4007 DOHH2_400M_050219_1,4009 DOHH2_400M_050219_1,4009,SEPSEVRSY False True SEPSEVRSY 20.483427 527.245654284954 742225.0625 4007.0 nc|ENSG00000178209|Q15149-5|PLEC;;nc|ENSG00000178209|Q15149-8|PLEC;;nc|ENSG00000178209|Q15149-6|PLEC;;nc|ENSG00000178209|Q15149|PLEC;;nc|ENSG00000178209|Q15149-9|PLEC;;nc|ENSG00000178209|Q15149-3|PLEC;;nc|ENSG00000178209|Q15149-7|PLEC;;nc|ENSG00000178209|Q15149-2|PLEC;;ENSG00000178209|ENST00000345136|PLEC 4.626504739125569 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4012 20.501 527.0 196550.0 25 0 23496.0 17567 KPQPTTRTP 9 120 513.2900479021364 1024.5655428710727 2 513.2902099490166 MULTI CID FTMS 0 0 0 4011 176945.609375 0.3017947650868348 -8 0.0630950927734375 1 Unmodified _KPQPTTRTP_ ENSG00000131187|ENST00000253496|F12;ENST00000502854.5_1_5:176830573-176831380:-|nuORF;ENST00000510358.5_1_5:176831194-176831380:-|nuORF 22.736283301280096 0.2418982879461534 1 KPT 3 6 43.188 0.0 0.0 4.2152 0.0 0.0 0.0 695.3480151729507 695.3480151729507 21.505149978319903 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.0 KPT 4.2152 - 627 + 1 2.327 85048.1 1.0 931 3079 4011 DOHH2_400M_050219_1,4012 DOHH2_400M_050219_1,4012,KPQPTTRTP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4013 20.505 221.0 212760.0 25 0 19652.0 + 20669 LLQTGRAGP 9 88 456.7666607555429 911.5187685778858 2 456.7664062380791 MULTI CID FTMS 0 0 0 4011 111676.71875 0.3359678109132766 -7 0.0545196533203125 2 Unmodified _LLQTGRAGP_ REV__ENSG00000113790|ENST00000231887|EHHADH;REV__ENST00000475987.1_1_3:184944632-184971810:-|nuORF;REV__nc|ENSG00000113790|Q08426-2|EHHADH 29.081581746732265 0.1611639662936252 1 {I|L}{I|L}QT 4 -1 50.164 0.0 0.0 5.5033 0.0 0.0 0.0 453.2187899225219 453.2187899225219 37.06485629844558 0.0 0.0 0.0 0 1.086696871556164 2.0 0.8494850021680094 0.0 {I|L}{I|L}QT 5.5033 + + 73 + 1 2.327 40977.6 1.0 932 3079 4011 DOHH2_400M_050219_1,4013 DOHH2_400M_050219_1,4013,LLQTGRAGP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4014 20.519 800.0 125440.0 25 0 25342.0 31406 RPFRSCDPH 9 91 557.764107682551 1113.5136624319018 2 557.7645141482353 MULTI CID FTMS 0 0 0 4011 91459.2421875 0.6386366341681678 -3 0.0382251739501953 3 Unmodified _RPFRSCDPH_ nc|ENSG00000240268|A6NHM9|MOXD2P 7.910154910731844 0.6385446671287552 1 K[RK]YT{M(Oxidation (M))|F}K 7 8 28.963 0.0 0.0 2.6011 0.0 0.0 143.953277755991 0.0 143.953277755991 0.0 14.041841734059444 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.1747425010840047 K[RK]YT{M(Oxidation (M))|F}K 2.6011 - 190 + 1 2.327 80129.7 0.4900000095367431 933 3079 4011 DOHH2_400M_050219_1,4014 DOHH2_400M_050219_1,4014,RPFRSCDPH False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4017 20.539 800.0 200920.0 25 0 11235.0 + 30105 QVIEKTKSL 9 149 523.3162114660227 1044.6178699988452 2 523.3166992068291 MULTI CID FTMS 0 0 0 4016 162782.734375 0.5039346011266788 -3 0.0391368865966796 1 Unmodified _QVIEKTKSL_ ENSG00000104408|ENST00000220849|EIF3E 66.45667989310934 0.0225072657982126 1 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EKTKS{I|L} 9 0 + 78.414 0.0 0.0 7.5065 7.5065 94.923 0.0 0.0 0.0 40.13866249595333 13.46787486224656 13.46787486224656 16.989700043360187 0 0.5356668758921829 2.0 1.048455006504028 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EKTKS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[TV]|[{I|L}S]}GTKS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EKT{[TV]|[{I|L}S]}K;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[TV]|[{I|L}S]}GT{[TV]|[{I|L}S]}K;[{I|L}A][VG]EKTKS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[HK]HVGK;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RP][KS]{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}A][VG]{[TV]|[{I|L}S]}GTKS{I|L};[{I|L}A][VG]EKT{[TV]|[{I|L}S]}K;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[HK][QP]VP 7.5065;5.8801;5.6563;4.0299;3.6267;2.4114;2.0342;2.0045;1.7765;1.7129 +;-;-;-;-;-;-;-;-;- + 746 + 1 2.327 125830.2 0.6000000238418579 934 3081 4016 DOHH2_400M_050219_1,4017 DOHH2_400M_050219_1,4017,QVIEKTKSL True True QVIEKTKSL 20.538972 523.316699206829 1377848.125 4016.0 ENSG00000104408|ENST00000220849|EIF3E 5.913925011952718 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4018 20.545 306.0 281540.0 25 0 40156.0 + 607 AEKAYHEQL 9 113 363.5173117542567 0 363.5171081423759 PEAK CID FTMS 0 0 0 4016 200361.40625 0.8270880956958896 -2 0.035064697265625 2 Unmodified _AEKAYHEQL_ ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000437364.2_1_1:47358067-47358181:+|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C 16.149105407346934 0.2417352846137613 1 EH 2 7 8.9402 0.0 0.0 1.2331 0.0 0.0 96.72101159269468 359.16114842603923 455.8821600187339 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 EH 1.2331 - 24 + 1 2.327 74159.8 1.0 935 3081 4016 DOHH2_400M_050219_1,4018 DOHH2_400M_050219_1,4018,AEKAYHEQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4019 20.558 800.0 238990.0 25 0 68666.0 + 38993 TVREEGAGRW 10 104 580.7940031470662 1159.5734533609325 2 580.7938720583916 MULTI CID FTMS 0 0 0 4016 134242.328125 0.1617669797252515 -7 0.0814361572265625 3 Unmodified _TVREEGAGRW_ REV__ENST00000529313.5_1_11:17298611-17304373:+|nuORF 28.49450938151212 0.328477364964909 1 {[TV]|[{I|L}S]}EREQR{M(Oxidation (M))|F} 8 -1 51.938 0.0 0.0 4.4791 0.0 0.0 0.0 111.08026423423226 111.08026423423226 14.698026149870586 0.0 0.0 0.0 0 2.1989700043360187 1.5228787452803376 0.2134679910804404 0.4247425010840047 {[TV]|[{I|L}S]}EREQR{M(Oxidation (M))|F} 4.4791 - 714 1 2.327 146987.0 0.5799999833106995 936 3081 4016 DOHH2_400M_050219_1,4019 DOHH2_400M_050219_1,4019,TVREEGAGRW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4021 20.563 59.0 917580.0 25 0 79557.0 + + 4759 DELESTNRRY 10 75 428.20571808486784 1281.5953248548035 3 428.2055541872978 MULTI CID FTMS 0 0 0 4020 482011.78125 0.2358320739315481 15 -0.3790225982666015 1 Unmodified _DEIEWHIVQN_ ENSG00000047315|ENST00000314595|POLR2B 12.240655878213236 0.6421556946785427 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E 4 -1 20.005 0.0 0.0 1.561 0.0 0.0 0.0 792.3747875075022 792.3747875075022 5.965240951829784 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E 1.561 + + 51 + 1 2.327 50652.0 1.0 937 3082 4020 DOHH2_400M_050219_1,4021 DOHH2_400M_050219_1,4021,DEIEWHIVQN False False DELESTNRRY 20.56317 428.205554187298 20026604.0 4020.0 ENSG00000047315|ENST00000314595|POLR2B 4.430012067159017 3.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4022 20.566 112.0 468080.0 25 0 60322.0 + -1 LTGWPLTMK 9 84 531.783976473968 1061.553400014736 2 531.7844116091728 MULTI CID FTMS 0 0 0 4020 441664.4375 0.228557106100539 29 -0.5613899230957031 2 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 27.628801355627647 0.1796483985696185 1 K[HQ][{I|L}P]T{M(Oxidation (M))|F}K 8 -1 41.749 0.0 0.0 3.9328 0.0 0.0 63.99842253960339 0.0 63.99842253960339 0.0 27.93666126345022 0.0 0.0 0 1.5 0.0 0.9247425010840048 0.2887254899964357 K[HQ][{I|L}P]T{M(Oxidation (M))|F}K 3.9328 - 274 + 1 2.327 47410.0 1.0 938 3082 4020 DOHH2_400M_050219_1,4022 DOHH2_400M_050219_1,4022,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4024 20.57 66.0 977390.0 25 0 147230.0 42685 VTWEVLEGEV 10 78 387.531597885467 1159.5729642566012 3 387.5315734744072 MULTI CID FTMS 0 0 0 4023 605849.625 0.3453848255480604 -5 0.0820674896240234 1 Unmodified _VTWEVLEGEV_ ENSG00000138385|ENST00000260956|SSB;ENST00000438469.2_1_1:146553889-146554591:-|nuORF 17.11289562659939 0.5604042439455784 1 VTERE 5 6 55.846 0.0 0.0 4.8161 0.0 0.0 0.0 542.2481173150999 542.2481173150999 52.3514532483668 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.4247425010840047 VTERE 4.8161 - 62 + 1 2.327 60964.0 1.0 939 3083 4023 DOHH2_400M_050219_1,4024 DOHH2_400M_050219_1,4024,VTWEVLEGEV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4025 20.574 199.0 325470.0 25 0 83079.0 + 4775 DELESTNRRY 10 48 641.8044869861108 1281.5944210390214 2 641.8045532107353 MULTI CID FTMS 0 0 0 4023 267125.1875 0.2022084228974715 15 -0.375864028930664 2 Unmodified _DELESTNRRY_ ENSG00000047315|ENST00000314595|POLR2B 10.898955630103616 0.6646681216928481 1 DE 2 8 38.188 0.0 0.0 2.9797 0.0 0.0 0.0 1034.5021379104116 1034.5021379104116 15.969100130080562 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + DE 2.9797 + + 13 + 1 2.327 53803.6 1.0 940 3083 4023 DOHH2_400M_050219_1,4025 DOHH2_400M_050219_1,4025,DELESTNRRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4026 20.578 192.0 266290.0 25 0 23001.0 + 30040 QTSRDTTMY 9 95 551.7450637794519 1101.4755746257038 2 551.7454711794853 MULTI CID FTMS 0 0 0 4023 340840.09375 0.6802265858003064 -4 0.0779953002929687 3 Unmodified _QTSRDTTMY_ ENSG00000165688|ENST00000371717|PMPCA 32.30548876998284 0.1201446275138228 1 MY 2 7 28.271 0.0 0.0 2.5667 0.0 0.0 789.3611164731632 0.0 789.3611164731632 0.0 16.052659518797938 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 + MY 2.5667 + + 173 + 1 2.327 44539.6 1.0 941 3083 4023 DOHH2_400M_050219_1,4026 DOHH2_400M_050219_1,4026,QTSRDTTMY True True QTSRDTTMY 20.57783 551.745471179485 2586313.0 4023.0 ENSG00000165688|ENST00000371717|PMPCA 5.718129793802897 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4027 20.581 156.0 338630.0 25 0 27284.0 + 6196 DTERESAVY 9 92 535.2432336985564 1068.4719144639128 2 535.2436401247978 MULTI CID FTMS 0 0 0 4023 314394.90625 0.4737531474806593 12 -0.3441753387451172 4 Unmodified _DTERESAVY_ ENST00000397532.7_1_14:23284899-23285010:-|nuORF 13.90604991867851 0.4602628045680013 1 AVY 3 6 30.049 0.0 0.0 2.8124 0.0 0.0 717.2974110334 0.0 717.2974110334 0.0 20.13457305997976 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + AVY 2.8124 + + 30 1 2.327 45347.6 1.0 942 3083 4023 DOHH2_400M_050219_1,4027 DOHH2_400M_050219_1,4027,DTERESAVY False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4028 20.588 405.0 276330.0 25 0 24641.0 + 8351 ESALRKQSL 9 135 516.2964356665908 1030.5783183999815 2 516.2964965701103 MULTI CID FTMS 0 0 0 4023 156467.546875 0.856013330454289 -1 0.0071468353271484 5 Unmodified _ESALRKQSL_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 110.79276546118962 0.005272472070827 1 ESA{I|L}RKQS{I|L} 9 0 + 69.604 0.0 0.0 6.7539 6.7539 91.805 0.0 0.0 0.0 40.03543819548739 11.706962271689754 11.706962271689754 10.887731606380868 0 2.261922997584469 1.3979400086720375 0.6462566630072955 0.3054621874040891 + + ESA{I|L}RKQS{I|L};{[ES]|[DT]|[{I|L}C]}A{I|L}RKQS{I|L};{I|L}CA{I|L}[VG]KQS{I|L};{[ES]|[DT]|[{I|L}C]}A{I|L}RK[AG]S{I|L};{[SA]|[TG]}E{I|L}RKQS{I|L};{[QN]|[E{I|L}]|[KN]}[WK]KQS{I|L};{[TV]|[{I|L}S]}Q[RK]AES{I|L};{[QS]|[NT]}{I|L}[RK]AES{I|L};{[SA]|[TG]}E{I|L}RK[AG]S{I|L};{[QN]|[E{I|L}]|[KN]}[WK]K[AG]S{I|L} 6.7539;5.6974;4.8182;4.8039;4.3773;4.1006;3.7546;3.5825;3.4838;3.2019 +;+;-;-;-;-;-;-;-;- + 460 + 1 2.327 88808.3 1.0 943 3083 4023 DOHH2_400M_050219_1,4028 DOHH2_400M_050219_1,4028,ESALRKQSL True True ESALRKQSL 20.588182 516.29649657011 948745.6875 4023.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 6.81023645401001 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4029 20.601 733.0 250900.0 25 0 37823.0 + 30851 RILQETVK 8 136 493.8029055099937 985.5912580867874 2 493.8035766482353 MULTI CID FTMS 0 0 0 4023 120510.140625 0.1991212603232536 -5 0.0820674896240234 6 Unmodified _RILQETVK_ ENSG00000156510|ENST00000354624|HKDC1 39.94969957227396 0.2351327405675156 1 {M(Oxidation (M))|F}TVK 4 5 50.037 0.0 0.0 5.0769 0.0 0.0 492.29500014472814 0.0 492.29500014472814 0.0 21.480625354554377 0.0 0.0 0 1.924742501084005 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}TVK 5.0769 - 411 1 2.327 142947.4 1.0 944 3083 4023 DOHH2_400M_050219_1,4029 DOHH2_400M_050219_1,4029,RILQETVK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4031 20.609 211.0 287280.0 25 0 28239.0 + 17711 KPTPTMLPL 9 84 499.2930732142505 996.571593495301 2 499.2936279177666 MULTI CID FTMS 0 0 0 4030 186007.71875 0.0850255506033021 -10 0.1597175598144531 1 Unmodified _KPTPTMLPL_ REV__ENST00000524459.5_1_6:26365525-26368786:+|nuORF 21.74664581756881 0.2544899275067181 1 KPT 3 -1 43.94 0.0 0.0 4.4091 0.0 0.0 0.0 667.3517550104124 667.3517550104124 32.68110275043508 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 KPT 4.4091 + + 23 + 1 2.348 53016.9 1.0 945 3084 4030 DOHH2_400M_050219_1,4031 DOHH2_400M_050219_1,4031,KPTPTMLPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4032 20.623 800.0 137860.0 25 0 34275.0 + 31829 RTDIARTEY 9 110 562.7882229168963 1123.5618929005925 2 562.7883788943291 MULTI CID FTMS 0 0 0 4030 156745.421875 0.3123514053452633 6 -0.1477642059326172 2 Unmodified _RTDIARTEY_ ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000556791.1_1_14:102499420-102503925:+|nuORF 18.373094154950223 0.3393451798331396 1 Y 1 8 19.732 0.0 0.0 1.7562 0.0 0.0 942.4882977851612 0.0 942.4882977851612 0.0 6.544387449636204 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + Y 1.7562 + + 144 + 1 2.348 91566.1 0.6499999761581421 946 3084 4030 DOHH2_400M_050219_1,4032 DOHH2_400M_050219_1,4032,RTDIARTEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4034 20.633 470.0 122810.0 25 0 20340.0 -1 LSDTTNCMEM 10 82 617.2228123565038 1232.4310717798076 2 617.2230712771416 MULTI CID FTMS 0 0 0 4033 146394.34375 0.604934289237376 -4 0.0999908447265625 1 Carbamidomethyl (C),2 Oxidation (M) _LSDTTNC(Carbamidomethyl (C))M(Oxidation (M))EM(Oxidation (M))_ ENSG00000174672|ENST00000528841|BRSK2;ENST00000531932.1_1_11:1475661-1480576:+|nuORF;nc|ENSG00000174672|Q8IWQ3-3|BRSK2;nc|ENSG00000174672|Q8IWQ3-5|BRSK2 22.736283301280096 0.4578556481593033 1 {[TV]|[{I|L}S]}D 3 -1 36.417 0.0 0.0 2.9549 0.0 0.0 0.0 914.2650310906076 914.2650310906076 14.628618393527407 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.7887254899964358 0.0 {[TV]|[{I|L}S]}D 2.9549 + + 90 1 2.348 48466.9 1.0 947 3085 4033 DOHH2_400M_050219_1,4034 DOHH2_400M_050219_1,4034,LSDTTNCMEM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4035 20.639 275.0 197630.0 25 0 14962.0 8036 ENKASSGSW 9 87 483.21976641186 964.42497989052 2 483.2199584841728 MULTI CID FTMS 0 0 0 4033 137171.984375 0.1853419367053674 -6 0.1350555419921875 2 Unmodified _ENKASSGSW_ ENSG00000196440|ENST00000423738|ARMCX4 20.453626601364224 0.2830276176381075 1 {[QS]|[NT]}KSSW{[QD]|[EN]|[WG]|[KD]|[RS]} 8 4 + 25.517 0.0 0.0 2.6458 2.6458 75.037 0.0 0.0 0.0 2.5633462390661776 9.03499299802587 2.5633462390661776 7.439804789107157 0 0.0 0.0 0.8807196863200843 0.2887254899964357 {[QS]|[NT]}KSSW{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}KSSGE{[QD]|[EN]|[WG]|[KD]|[RS]};[KG]{[SA]|[TG]}SSW{[QD]|[EN]|[WG]|[KD]|[RS]};{[QD]|[EN]|[WG]|[KD]|[RS]}[KQ]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}W;{[QD]|[EN]|[WG]|[KD]|[RS]}[KA]G{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}W;{[QD]|[EN]|[WG]|[KD]|[RS]}[HK][HD]W;[KG]{[SA]|[TG]}SSGE{[QD]|[EN]|[WG]|[KD]|[RS]} 2.6458;1.8744;0.89134;0.76016;0.54851;0.36593;0.12551 -;-;-;-;-;-;- 114 1 2.348 49438.9 1.0 948 3085 4033 DOHH2_400M_050219_1,4035 DOHH2_400M_050219_1,4035,ENKASSGSW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4036 20.652 800.0 68921.0 25 0 5334.0 -1 KQEGRSGKYMC 11 83 672.3150490159624 1342.6155450987246 2 672.3138915896416 MULTI CID FTMS 0 0 0 4033 89862.53125 0.87634599563869 3 -0.0584678649902343 3 Carbamidomethyl (C) _KQEGRSGKYMC(Carbamidomethyl (C))_ ENSG00000101019|ENST00000374385|UQCC1;ENST00000491040.5_1_20:33934876-33981976:-|nuORF;nc|ENSG00000101019|Q9NVA1-2|UQCC1;nc|ENSG00000101019|Q9NVA1-3|UQCC1;nc|ENSG00000101019|Q9NVA1-4|UQCC1;nc|ENSG00000101019|Q9NVA1-5|UQCC1 16.149105407346934 0.6992268271266642 1 VYSS[KS]HSY 9 -1 37.317 0.0 0.0 2.7794 0.0 0.0 286.1216008621996 0.0 286.1216008621996 0.0 25.13784609906625 0.0 0.0 0 0.3807196863200844 0.0 0.805462187404089 0.3807196863200844 VYSS[KS]HSY 2.7794 - 257 + 1 2.348 43966.6 0.4699999988079071 949 3085 4033 DOHH2_400M_050219_1,4036 DOHH2_400M_050219_1,4036,KQEGRSGKYMC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4039 20.67 616.0 122700.0 25 0 6137.9 + 7077 EELNSTQRV 9 109 538.2716809217771 1074.5288089103542 2 538.2725707888603 MULTI CID FTMS 0 0 0 4038 80707.25 0.8141764439031941 1 -0.0246334075927734 1 Unmodified _EELNSTQRV_ ENSG00000119285|ENST00000366582|HEATR1 45.69961567697781 0.0497987121815769 1 EE{I|L}NSTQ[RV] 9 0 + 61.008 0.0 0.0 5.6777 5.6777 86.827 0.0 0.0 0.0 47.297050633636175 2.922152515121219 2.922152515121219 9.208187539523747 0 0.5 1.6989700043360187 0.2614393726401688 0.7742275032520141 + + EE{I|L}NSTQ[RV];EE{I|L}NST[AG][RV];EE{I|L}GGSTQ[RV];EE{I|L}NS{[QV]|[N{I|L}]|[RA]|[KV]}EK;EE{I|L}N[WK]EK;EE{I|L}GGST[AG][RV];EE{I|L}N[C(Carbamidomethyl (C))R][RV];EE{I|L}GGS{[QV]|[N{I|L}]|[RA]|[KV]}EK;EE{I|L}[{I|L}P]AE{M(Oxidation (M))|F}K;EE{I|L}GG[WK]EK 5.6777;4.8207;4.8207;4.5292;4.3703;3.9679;3.8107;3.6723;3.5142;3.5084 +;-;-;-;-;-;-;-;-;- + 213 + 1 2.36 63696.8 1.0 950 3087 4038 DOHH2_400M_050219_1,4039 DOHH2_400M_050219_1,4039,EELNSTQRV True True EELNSTQRV 20.66974 538.27257078886 407687.65625 4038.0 ENSG00000119285|ENST00000366582|HEATR1 6.28543758392334 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4040 20.681 649.0 126980.0 25 0 8939.6 + 6025 DSDLRNDSY 9 122 542.7299853584461 1083.4454177836922 2 542.7307617068291 MULTI CID FTMS 0 0 0 4038 111450.765625 0.9401454837726242 1 -0.0246334075927734 2 Unmodified _DSDLRNDSY_ ENSG00000078403|ENST00000307729|MLLT10;nc|ENSG00000078403|P55197-1|MLLT10 103.41943736471065 0.0091853052135676 1 {[DS]|[MA]|[CV]|TT}D{I|L}RNDSY 9 0 + 62.595 0.0 0.0 5.7774 5.7774 83.265 0.0 0.0 0.0 3.748162098248997 41.96038326757167 3.748162098248997 5.796896906561031 0 2.3182503180159344 0.0 1.8556270500406933 0.3054621874040891 + + {[DS]|[MA]|[CV]|TT}D{I|L}RNDSY;{[DS]|[MA]|[CV]|TT}D{I|L}RNDYS;{[DS]|[MA]|[CV]|TT}D{I|L}RGGDSY;{[DS]|[MA]|[CV]|TT}D{I|L}RGGDYS;[{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}SDDSY;[{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}DSDSY;[DN][R{I|L}]SDDSY;[DN][R{I|L}]DSDSY;{[DS]|[MA]|[CV]|TT}D{I|L}RNYDS;[{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}SDDYS 5.7774;5.2424;4.9275;4.3925;3.7124;3.597;3.5771;3.4618;3.4293;3.1773 +;-;-;-;-;-;-;-;-;- + 841 1 2.36 66134.6 1.0 951 3087 4038 DOHH2_400M_050219_1,4040 DOHH2_400M_050219_1,4040,DSDLRNDSY True True DSDLRNDSY 20.681061 542.730761706829 546789.625 4038.0 ENSG00000078403|ENST00000307729|MLLT10;;nc|ENSG00000078403|P55197-1|MLLT10 7.925842920939128 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4042 20.693 544.0 128490.0 25 0 14109.0 + 16676 KENPNQYNY 9 99 585.2644021923148 1168.5142514514296 2 585.2634155154228 MULTI CID FTMS 0 0 0 4041 133336.59375 1.0 0 0.0 1 Unmodified _KENPNQYNY_ ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620-3|CUL4B;nc|ENSG00000158290|Q13620|CUL4B 69.10491478415734 0.0214449631113747 1 [KQ]D[NP]QYNY 9 2 + 54.851 0.0 0.0 4.6941 4.6941 83.269 0.0 0.0 0.0 8.499161495794425 38.29673690475927 8.499161495794425 9.208187539523747 0 1.1989700043360187 0.0 0.2887254899964357 2.2104093769761874 [KQ]D[NP]QYNY;[KQ]D[NP][AG]YNY;[KQ]D[NP]QYGGY;[VS]{[QG]|[NA]}[NP]QYNY;[KQ]YYQYNY;[KQ]DMD[KQ]NY;[KQ]DMN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NY;[KQ]YY[AG]YNY;[KQ]YYQYGGY;[NP]AA[QT]QYNY 4.6941;3.9061;3.9061;3.6955;3.23;2.7847;2.7101;2.4374;2.4374;2.4032 -;-;-;-;-;-;-;-;-;- 310 1 2.36 54216.8 1.0 952 3088 4041 DOHH2_400M_050219_1,4042 DOHH2_400M_050219_1,4042,KENPNQYNY True True KENPNQYNY 20.693173 585.263415515423 716755.25 4041.0 nc|ENSG00000158290|Q13620-3|CUL4B;;nc|ENSG00000158290|Q13620|CUL4B;;ENSG00000158290|ENST00000371322|CUL4B 7.628371556599935 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4043 20.695 73.0 1007800.0 25 0 96156.0 + 5189 DIRAKEKEL 9 107 367.88060627811353 1100.619989434541 3 367.8802368044853 MULTI CID FTMS 0 0 0 4041 729530.0 0.6379481562733816 -2 0.0286979675292968 2 Unmodified _DIRAKEKEL_ ENSG00000124541|ENST00000244496|RRP36;nc|ENSG00000124541|Q96EU6-2|RRP36 42.312485326615175 0.0627620958981271 1 {I|L}D{M(Oxidation (M))|F}{I|L} 4 7 52.907 0.0 0.0 4.807 0.0 0.0 0.0 609.3465670221311 609.3465670221311 17.589576808574364 0.0 0.0 0.0 0 0.1989700043360188 2.0 0.3494850021680094 0.0 {I|L}D{M(Oxidation (M))|F}{I|L} 4.807 - 537 + 1 2.36 63204.7 1.0 953 3088 4041 DOHH2_400M_050219_1,4043 DOHH2_400M_050219_1,4043,DIRAKEKEL True True DIRAKEKEL 20.694877 367.880236804485 5082449.0 4041.0 nc|ENSG00000124541|Q96EU6-2|RRP36;;ENSG00000124541|ENST00000244496|RRP36 2.5854084566235542 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4044 20.703 445.0 267030.0 25 0 19251.0 + 530 AEIDDRKQL 9 136 544.2912644105633 1086.5679758879264 2 544.2925292849541 MULTI CID FTMS 0 0 0 4041 158355.65625 0.4050276076657401 -3 0.0584678649902343 3 Unmodified _AEIDDRKQL_ ENSG00000141425|ENST00000399022|RPRD1A;nc|ENSG00000141425|Q96P16-3|RPRD1A 74.19965305603844 0.0194755241623067 1 AE{I|L}{I|L}[HT]YQ{I|L} 9 4 + 87.154 0.0 0.0 8.021 8.021 93.848 0.0 0.0 0.0 31.06517002732248 9.436974992327125 9.436974992327125 9.436974992327125 0 1.75 2.0 1.0356668758921828 1.1549471895720984 AE{I|L}{I|L}[HT]YQ{I|L};AE{I|L}{I|L}[HT]Y{I|L}Q;AE{I|L}{I|L}[HT]YGA{I|L};AE{I|L}{I|L}[HT][Q{I|L}]Y;{[QN]|[E{I|L}]|[KN]}WDVGKQ{I|L};{[QN]|[E{I|L}]|[KN]}A[WK]EAQ{I|L};{[QN]|[E{I|L}]|[KN]}WDVGK[AG]{I|L};{[CP]|[EA]}{I|L}[WK]EAQ{I|L};{[QN]|[E{I|L}]|[KN]}A[WK]EA[AG]{I|L};{[QN]|[E{I|L}]|[KN]}WDV{I|L}EA{I|L} 8.021;7.1525;6.5045;6.342;5.162;4.7606;4.3146;4.1768;3.9131;3.5753 -;-;-;-;-;-;-;-;-;- 1194 + 1 2.36 93521.5 1.0 954 3088 4041 DOHH2_400M_050219_1,4044 DOHH2_400M_050219_1,4044,AEIDDRKQL True True AEIDDRKQL 20.702798 544.292529284954 3608581.0 4041.0 ENSG00000141425|ENST00000399022|RPRD1A;;nc|ENSG00000141425|Q96P16-3|RPRD1A 5.108786424001058 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4045 20.717 800.0 123150.0 25 0 12370.0 + 2594 ASNDYTQQATQ 11 109 634.7727467580688 1267.5309405829375 2 634.7722656130791 MULTI CID FTMS 0 0 0 4041 135468.21875 0.4362013086493072 -3 0.0584678649902343 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNDYTQQATQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 103.82355648334676 0.0046447410502644 1 ATQ 3 8 41.788 0.0 0.0 3.2968 0.0 0.0 949.3765959557876 0.0 949.3765959557876 0.0 1.1601542687403563 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.7302046884880937 + ATQ 3.2968 + + 2514 + 1 2.36 78096.4 0.5899999737739563 955 3088 4041 DOHH2_400M_050219_1,4045 DOHH2_400M_050219_1,4045,ASNDYTQQATQ True False ASNDYTQQATQ 20.716636 634.772265613079 1663927.5 4041.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 7.012152512868245 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4046 20.727 620.0 128880.0 25 0 9985.0 + -1 AEVTTDDRAY 10 99 570.4276419033615 3416.5221926205686 6 570.7625610232353 MULTI CID FTMS 0 0 0 4041 84642.71875 0.8486538430206254 -1 0.0246334075927734 5 nc|ENSG00000176986|P53992-2|SEC24C;ENSG00000176986|ENST00000345254|SEC24C 1 {[TV]|[{I|L}S]}[HA]DDTTV 9 -1 35.95 0.0 0.0 1.0522 0.0 0.0 0.0 2474.0713799999826 2474.0713799999826 22.137436987320328 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.5649093276264391 0.0 {[TV]|[{I|L}S]}[HA]DDTTV 1.0522 - 314 1 2.36 65204.1 1.0 956 3088 4041 DOHH2_400M_050219_1,4046 DOHH2_400M_050219_1,4046, False False AEVTTDDRAY 20.727471 570.762 912903.75 4041.0 nc|ENSG00000176986|P53992-2|SEC24C;;ENSG00000176986|ENST00000345254|SEC24C 8.10897159576416 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4048 20.735 260.0 233810.0 25 0 25518.0 + 16605 KEAETRAEF 9 76 540.7695774520524 1079.5246019709048 2 540.7693969607353 MULTI CID FTMS 0 0 0 4047 218644.671875 0.7463150277533598 -1 0.046426773071289 1 Unmodified _KEAETRAEF_ CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000167460|ENST00000643579|TPM4;ENSG00000198467|ENST00000645482|TPM2;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;ENST00000559108.1_1_15:63354467-63358183:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000143549|P06753-7|TPM3;nc|ENSG00000167460|P67936-2|TPM4;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2 36.506200033944 0.094635877243972 1 KEAE[VG]{[RE]|[WV]}Y 9 4 + 57.681 0.0 0.0 5.3432 5.3432 90.751 0.0 0.0 0.0 38.70174676113472 9.946049681132934 9.946049681132934 57.68114684785509 0 0.7742275032520141 0.0 0.805462187404089 0.0 KEAE[VG]{[RE]|[WV]}Y 5.3432 - 53 + 1 2.36 49467.7 1.0 957 3089 4047 DOHH2_400M_050219_1,4048 DOHH2_400M_050219_1,4048,KEAETRAEF True True KEAETRAEF 20.734856 540.769396960735 1279680.25 4047.0 nc|ENSG00000143549|P06753-7|TPM3;;nc|ENSG00000143549|P06753-3|TPM3;;ENST00000520239.1_1_8:70042334-70042577:+|nuORF;;ENSG00000167460|ENST00000643579|TPM4;;ENST00000469717.5_1_1:154130117-154143232:-|nuORF;;nc|ENSG00000140416|P09493-9|TPM1;;ENST00000559108.1_1_15:63354467-63358183:+|nuORF;;ENST00000397772.2_1_20:32500135-32500381:-|nuORF;;nc|ENSG00000140416|P09493-10|TPM1;;nc|ENSG00000140416|P09493-2|TPM1;;nc|ENSG00000140416|P09493-4|TPM1;;nc|ENSG00000140416|P09493-3|TPM1;;ENST00000368528.3_1_3:27674554-27675208:+|nuORF;;nc|ENSG00000143549|P06753-5|TPM3;;ENSG00000140416|ENST00000403994|TPM1;;ENSG00000143549|ENST00000651641|TPM3;;nc|ENSG00000140416|P09493-5|TPM1;;ENSG00000198467|ENST00000645482|TPM2;;nc|ENSG00000143549|P06753-6|TPM3;;nc|ENSG00000140416|P09493-7|TPM1;;ENST00000558264.5_1_15:63353458-63363368:+|nuORF;;nc|ENSG00000140416|P09493-8|TPM1;;nc|ENSG00000143549|P06753-2|TPM3;;nc|ENSG00000198467|P07951-3|TPM2;;nc|ENSG00000140416|P09493-6|TPM1;;nc|ENSG00000198467|P07951-2|TPM2;;nc|ENSG00000143549|P06753-4|TPM3;;nc|ENSG00000167460|P67936-2|TPM4;;Q3SX28 4.357541879018148 2.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 4049 20.749 800.0 145260.0 25 0 26238.0 + 13084 HEERIFEETI 10 104 434.8822017041066 0 434.8816711306572 PEAK CID FTMS 0 0 0 4047 73255.8515625 0.5350923125999723 135 -3.505577087402344 2 Unmodified _HEERIFEETI_ REV__ENST00000582668.1_1_17:73267497-73269738:+|nuORF 3.944395688203298 0.3961065659209837 1 GH 2 -1 9.464 0.0 0.0 1.0906 0.0 0.0 99.337353437255 571.3156221979124 670.6529756351674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GH 1.0906 - 21 + 1 2.36 94538.8 0.949999988079071 958 3089 4047 DOHH2_400M_050219_1,4049 DOHH2_400M_050219_1,4049,HEERIFEETI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4051 20.757 218.0 303010.0 25 0 36738.0 + 27522 PKQTPPTTR 9 88 513.2900479021364 1024.5655428710727 2 513.2905761599541 MULTI CID FTMS 0 0 0 4050 263978.1875 0.4502357270463407 3 -0.1002082824707031 1 Unmodified _PKQTPPTTR_ REV__ENSG00000138443|ENST00000261018|ABI2;REV__ENST00000441061.5_2_2:204231693-204292072:+|nuORF;REV__nc|ENSG00000138443|Q9NYB9-2|ABI2;REV__nc|ENSG00000138443|Q9NYB9-3|ABI2;REV__nc|ENSG00000138443|Q9NYB9-4|ABI2;REV__nc|ENSG00000138443|Q9NYB9|ABI2 13.90604991867851 0.4602628045680013 1 KPTGKC(Carbamidomethyl (C))K 7 -1 54.06 0.0 0.0 5.2764 0.0 0.0 0.0 222.0890596979125 222.0890596979125 43.6818101901704 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTGKC(Carbamidomethyl (C))K 5.2764 - 214 + 1 2.353 54029.2 1.0 959 3090 4050 DOHH2_400M_050219_1,4051 DOHH2_400M_050219_1,4051,PKQTPPTTR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4052 20.759 124.0 553310.0 25 0 60540.0 + 5385 DLKQLDKEL 9 89 551.3121049828953 0 551.3165161013603 PEAK CID FTMS 0 0 0 4050 378819.125 1.0 0 0.0 2 Unmodified _DLKQLDKEL_ REV__nc|ENSG00000215296|A8MYB1|TMCO5B 36.506200033944 0.0788933506710822 1 EKED 4 -1 22.652 0.0 0.0 2.0581 0.0 0.0 131.08763420737745 465.2977083795532 596.3853425869306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 EKED 2.0581 - 56 + 1 2.353 58000.0 1.0 960 3090 4050 DOHH2_400M_050219_1,4052 DOHH2_400M_050219_1,4052,DLKQLDKEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4053 20.773 800.0 167300.0 25 0 23118.0 + -1 EAVMCPWCM 9 123 571.7108262342045 1141.407099535209 2 571.7114745974541 MULTI CID FTMS 0 0 0 4050 95388.6875 0.88504304143789 -1 0.0211601257324218 3 Carbamidomethyl (C),Oxidation (M) _EAVM(Oxidation (M))C(Carbamidomethyl (C))PWCM_ REV__ENSG00000204480|ENST00000376101|PRAMEF19 4.3292370932331545 0.7635526921153418 1 C{M(Oxidation (M))|F}NRY 5 -1 36.503 0.0 0.0 3.1981 0.0 0.0 440.1134726814965 0.0 440.1134726814965 0.0 16.247205751529773 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.3807196863200844 C{M(Oxidation (M))|F}NRY 3.1981 - 778 + 1 2.353 102856.7 0.5099999904632568 961 3090 4050 DOHH2_400M_050219_1,4053 DOHH2_400M_050219_1,4053,EAVMCPWCM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4054 20.785 693.0 276150.0 25 0 16844.0 + 23407 LTEKANHYY 9 183 380.1901313212478 1137.5485645639435 3 380.1922485232353 MULTI CID FTMS 0 0 0 4050 96169.2265625 0.2050008426749233 -6 0.1477642059326172 4 Unmodified _LTEKANHYY_ ENSG00000127054|ENST00000435064|INTS11;ENST00000470030.6_1_1:1248876-1250311:-|nuORF;ENST00000478641.5_1_1:1248876-1249468:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 10.823927491677226 0.5436922275383211 1 {I|L}{[ET]|[MV]}NTEA{I|L} 8 6 29.139 0.0 0.0 2.5616 0.0 0.0 0.0 263.0792330377563 263.0792330377563 16.040441304335182 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{[ET]|[MV]}NTEA{I|L} 2.5616 - 205 + 1 2.353 152361.3 1.0 962 3090 4050 DOHH2_400M_050219_1,4054 DOHH2_400M_050219_1,4054,LTEKANHYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4056 20.8 716.0 158780.0 25 0 13178.0 + 20662 LLQPRGASA 9 159 456.7666607555429 911.5187685778858 2 456.7670776247978 MULTI CID FTMS 0 0 0 4055 66408.015625 0.1997816186431061 5 -0.1436481475830078 1 Unmodified _LLQPRGASA_ ENSG00000131650|ENST00000303746|KREMEN2;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;nc|ENSG00000131650|Q8NCW0-3|KREMEN2;nc|ENSG00000131650|Q8NCW0-4|KREMEN2;nc|ENSG00000131650|Q8NCW0-5|KREMEN2;nc|ENSG00000131650|Q8NCW0-6|KREMEN2 29.081581746732265 0.1611639662936252 1 {I|L}{I|L}Q 3 6 54.737 0.0 0.0 6.005 0.0 0.0 0.0 554.2698086032267 554.2698086032267 44.73705952196511 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.3807196863200844 + {I|L}{I|L}Q 6.005 + + 156 + 1 2.353 90180.9 1.0 963 3091 4055 DOHH2_400M_050219_1,4056 DOHH2_400M_050219_1,4056,LLQPRGASA False True LLQPRGASA 20.799898 456.767077624798 3689089.0 4055.0 ENSG00000131650|ENST00000303746|KREMEN2;;nc|ENSG00000131650|Q8NCW0-5|KREMEN2;;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;;nc|ENSG00000131650|Q8NCW0-4|KREMEN2;;nc|ENSG00000131650|Q8NCW0-6|KREMEN2;;nc|ENSG00000131650|Q8NCW0-3|KREMEN2 3.03212841351827 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4057 20.804 245.0 254870.0 25 0 36886.0 + -1 EKLNGQLMK 9 83 538.7918405772559 1075.5691282213118 2 538.7917358279228 MULTI CID FTMS 0 0 0 4055 236751.015625 0.696018809699021 -6 0.1623458862304687 2 Oxidation (M) _EKLNGQLM(Oxidation (M))K_ REV__ENSG00000129596|ENST00000250535|CDO1;REV__ENST00000502631.1_1_5:115145323-115152339:-|nuORF 19.256988751693697 0.3154191944385105 1 T{M(Oxidation (M))|F}K 3 -1 42.99 0.0 0.0 3.9969 0.0 0.0 681.3801461429899 0.0 681.3801461429899 0.0 21.400384653384204 0.0 0.0 0 1.424742501084005 0.0 0.3054621874040891 0.25 T{M(Oxidation (M))|F}K 3.9969 - 141 + 1 2.353 55990.0 1.0 964 3091 4055 DOHH2_400M_050219_1,4057 DOHH2_400M_050219_1,4057,EKLNGQLMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4058 20.809 253.0 182850.0 25 0 20330.0 796 AESLSGEAL 9 98 438.7187507432188 875.4229485532377 2 438.7183715701103 MULTI CID FTMS 0 0 0 4055 137840.125 0.6326596810270039 -2 0.0574512481689453 3 Unmodified _AESLSGEAL_ ENST00000263256.6_1_22:42003308-42016868:-|nuORF 23.1484247019978 0.2366544122328345 1 {[CP]|[EA]}E[KS]EA{I|L} 8 3 {[CP]|[EA]}E[KS]E + + 25.969 10.775 1.6003 2.9665 2.9665 50.391 0.0 0.0 0.0 0.0 8.204393893508094 0.0 0.0 0 0.5 0.0 0.0 0.0 {[CP]|[EA]}E[KS]EA{I|L} 2.9665 - 114 + 1 2.353 39651.2 1.0 965 3091 4055 DOHH2_400M_050219_1,4058 DOHH2_400M_050219_1,4058,AESLSGEAL False True SKEEAEAL 20.809172 438.71837157011 1006317.1875 4055.0 P35908;;P35908v2;;ENSG00000172867|ENST00000309680|KRT2 1.648197054862976 2.0 False 8.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4059 20.823 800.0 114830.0 25 0 9342.1 + 6824 EEAQYQREY 9 106 608.2673911505087 1214.5202293678174 2 608.2683593630791 MULTI CID FTMS 0 0 0 4055 95350.9296875 0.7060584322911213 -1 0.0362911224365234 4 Unmodified _EEAQYQREY_ ENSG00000126581|ENST00000590099|BECN1;ENST00000589493.1_1_17:40967924-40970674:-|nuORF 88.95385435242217 0.0153473310052057 1 EEAQYQ{[RE]|[WV]}Y 9 0 + 76.0 0.0 0.0 6.2576 6.2576 88.952 0.0 0.0 0.0 12.536122882990869 12.536122882990869 12.536122882990869 9.208187539523747 0 0.6694451763165201 1.6989700043360187 1.055462187404089 1.066901560044258 + + EEAQYQ{[RE]|[WV]}Y;EEAQY[AG]{[RE]|[WV]}Y;EEA[AG]YQ{[RE]|[WV]}Y;EEA[HK]YQA[HC];EEAQY{M(Oxidation (M))|F}[VG]{[WS]|[C(Carbamidomethyl (C)){I|L}]};EEAQYQ[HV][DP];EEA[HK]Y[AG]A[HC];[AG]YR{M(Oxidation (M))|F}YQA[HC];{[ET]|[MV]}[HV]QY[AG]A[HC];{[ET]|[MV]}[HV][AG]YQA[HC] 6.2576;5.4995;5.4995;5.2254;4.7885;4.7612;4.4709;4.342;4.0067;3.7914 +;-;-;-;-;-;-;-;-;- + 735 + 1 2.353 70550.2 0.5 966 3091 4055 DOHH2_400M_050219_1,4059 DOHH2_400M_050219_1,4059,EEAQYQREY True True EEAQYQREY 20.82301 608.268359363079 588534.3125 4055.0 ENSG00000126581|ENST00000590099|BECN1;;ENST00000589493.1_1_17:40967924-40970674:-|nuORF 8.161486784617106 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4060 20.83 415.0 227990.0 25 0 26734.0 5933 DQDESYDYLNE 11 118 464.1794761376358 1389.5165990131077 3 464.1793395876884 MULTI CID FTMS 0 0 0 4055 95339.1953125 0.4207082246319679 -3 0.1038780212402343 5 Unmodified _DQDESYDYLNE_ ENSG00000071991|ENST00000262150|CDH19 5.868138319507137 0.8474616764770629 1 Y 1 10 16.99 0.0 0.0 1.2227 0.0 0.0 1208.442240958223 0.0 1208.442240958223 0.0 -6.465912507003608 -6.465912507003608 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2227 + + 155 + 1 2.353 78845.9 1.0 967 3091 4055 DOHH2_400M_050219_1,4060 DOHH2_400M_050219_1,4060,DQDESYDYLNE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4061 20.841 609.0 130620.0 25 0 8379.4 + 16670 KENIQTTNY 9 137 555.7770663172046 1109.539579701209 2 555.7738525271416 MULTI CID FTMS 0 0 0 4055 103575.0703125 0.7634446639471771 -1 0.0362911224365234 6 Unmodified _KENIQTTNY_ ENSG00000137812|ENST00000399668|KNL1;ENST00000533001.1_1_15:40886490-40917961:+|nuORF;nc|ENSG00000137812|Q8NG31-3|KNL1;nc|ENSG00000137812|Q8NG31-4|KNL1;nc|ENSG00000137812|Q8NG31|KNL1 57.72198328787511 0.0273433238377839 1 [VS]GQ{I|L}QTTNY 10 4 + 77.305 0.0 0.0 6.9673 6.9673 89.689 0.0 0.0 0.0 18.521825181113627 13.521825181113629 13.521825181113629 9.164539485499247 0 1.424742501084005 1.3010299956639813 1.035666875892183 0.8366968715561641 [VS]GQ{I|L}QTTNY;[VS]GQ{I|L}QTTGGY;[VS]GQ{I|L}[AG]TTNY;[VS]G[AG]{I|L}QTTNY;[VS]GQ{I|L}[AG]TTGGY;{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}QTTNY;VSDDD{I|L}RKY;[VS]G[AG]{I|L}QTTGGY;{[QS]|[NT]}[VG]{I|L}QTTNY;[VS]G[AG]{I|L}[AG]TTNY 6.9673;6.1413;6.1413;5.9057;5.3186;5.298;5.2124;5.083;4.9854;4.8577 -;-;-;-;-;-;-;-;-;- 2452 1 2.353 64306.0 1.0 968 3091 4055 DOHH2_400M_050219_1,4061 DOHH2_400M_050219_1,4061,KENIQTTNY True True KENIQTTNY 20.841066 555.773852527142 598984.75 4055.0 nc|ENSG00000137812|Q8NG31-3|KNL1;;ENSG00000137812|ENST00000399668|KNL1;;ENST00000533001.1_1_15:40886490-40917961:+|nuORF;;nc|ENSG00000137812|Q8NG31-4|KNL1;;nc|ENSG00000137812|Q8NG31|KNL1 5.913818995157878 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4063 20.846 66.0 872510.0 25 0 119020.0 + 42427 VTERSPETEL 10 68 387.531597885467 1159.5729642566012 3 387.5315734744072 MULTI CID FTMS 0 0 0 4062 439221.625 0.2503929656266777 4 -0.087686538696289 1 Unmodified _VTERSPETEL_ REV__nc|ENSG00000114544|Q96GZ6-5|SLC41A3 11.494710602746466 0.654671931888957 1 VTERE 5 -1 47.708 0.0 0.0 4.1143 0.0 0.0 0.0 542.2483614557249 542.2483614557249 46.73902187720806 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.3807196863200844 VTERE 4.1143 - 56 + 1 2.353 54904.8 1.0 969 3092 4062 DOHH2_400M_050219_1,4063 DOHH2_400M_050219_1,4063,VTERSPETEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4064 20.849 171.0 337380.0 25 0 86640.0 42625 VTTNAQRWAN 10 61 580.7940031470662 1159.5734533609325 2 580.7940551638603 MULTI CID FTMS 0 0 0 4062 260394.65625 0.3137852096764476 4 -0.087686538696289 2 Unmodified _VTTNAQRWAN_ ENSG00000124490|ENST00000339139|CRISP2;nc|ENSG00000124490|P16562-2|CRISP2 8.155526934196011 0.6889124077178598 1 [EP][YR]E[W{I|L}][PA] 9 8 + 27.636 0.0 0.0 2.3833 2.3833 81.338 0.0 0.0 0.0 9.69028706889603 13.683174735333171 9.69028706889603 27.635599662620013 0 0.3252574989159953 1.6989700043360187 0.0 0.0 [EP][YR]E[W{I|L}][PA] 2.3833 - 42 1 2.353 46381.3 1.0 970 3092 4062 DOHH2_400M_050219_1,4064 DOHH2_400M_050219_1,4064,VTTNAQRWAN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4066 20.854 22.0 2719300.0 25 0 305820.0 + 7147 EENKLVKKI 9 88 367.56080245214304 1099.6605779566291 3 367.5605956912041 MULTI CID FTMS 0 0 0 4065 1932992.75 0.5663245268513688 -4 0.121368408203125 1 Unmodified _EENKLVKKI_ ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7 13.90604991867851 0.4602628045680013 1 {I|L}VKK{I|L} 5 4 19.27 0.0 0.0 1.7523 0.0 0.0 500.22351848572913 0.0 500.22351848572913 0.0 -1.9010562085580285 -1.9010562085580285 0.0 0 0.5 0.0 0.0 0.0 + {I|L}VKK{I|L} 1.7523 + + 90 + 1 2.353 55639.9 1.0 971 3093 4065 DOHH2_400M_050219_1,4066 DOHH2_400M_050219_1,4066,EENKLVKKI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4067 20.856 101.0 783030.0 25 0 69848.0 + 7148 EENKLVKKI 9 101 550.837274781027 1099.6599966288538 2 550.8372680544853 MULTI CID FTMS 0 0 0 4065 643278.0 0.5303886808892456 -2 0.0639171600341796 2 Unmodified _EENKLVKKI_ ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7 99.7552728972412 0.0110101799492648 1 EENK{I|L}VKK{I|L} 9 0 + 65.588 0.0 0.0 5.9644 5.9644 82.853 0.0 0.0 0.0 20.10911756343777 4.5860731484177535 4.5860731484177535 4.5860731484177535 0 2.0356668758921828 1.5228787452803376 0.0 0.2614393726401688 + + EENK{I|L}VKK{I|L};EENK{I|L}VK{I|L}K;EEGGK{I|L}VKK{I|L};EEGGK{I|L}VK{I|L}K;{[QN]|[E{I|L}]|[KN]}[KG]{[DA]|[EG]}VKK{I|L};KK[TP]EEKK{I|L} 5.9644;5.5473;5.127;4.71;3.5721;2.9293 +;-;-;-;-;- + 256 + 1 2.353 63755.0 1.0 972 3093 4065 DOHH2_400M_050219_1,4067 DOHH2_400M_050219_1,4067,EENKLVKKI True True EENKLVKKI 20.855835 550.837268054485 4470834.5 4065.0 nc|ENSG00000122545|Q16181-2|SEPTIN7;;ENSG00000122545|ENST00000350320|SEPTIN7;;ENST00000425198.1_1_7:35872473-35938044:+|nuORF 4.43760867913564 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4068 20.86 236.0 204780.0 25 0 19989.0 + 23408 LTEKANHYY 9 83 569.7798288687147 1137.5451048042294 2 569.7797729372978 MULTI CID FTMS 0 0 0 4065 193733.859375 0.7985050611084367 -3 0.1002082824707031 3 Unmodified _LTEKANHYY_ ENSG00000127054|ENST00000435064|INTS11;ENST00000470030.6_1_1:1248876-1250311:-|nuORF;ENST00000478641.5_1_1:1248876-1249468:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 34.40172386719151 0.1061884637610825 1 {I|L}TEKP 5 5 50.93 0.0 0.0 4.4772 0.0 0.0 0.0 566.2041109674436 566.2041109674436 32.70303756120384 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}TEKP 4.4772 - 382 + 1 2.353 41044.8 1.0 973 3093 4065 DOHH2_400M_050219_1,4068 DOHH2_400M_050219_1,4068,LTEKANHYY True True LTEKANHYY 20.860262 569.779772937298 1017333.625 4065.0 nc|ENSG00000127054|Q5TA45-4|INTS11;;ENSG00000127054|ENST00000435064|INTS11;;nc|ENSG00000127054|Q5TA45-2|INTS11;;nc|ENSG00000127054|Q5TA45-3|INTS11;;nc|ENSG00000127054|Q5TA45-5|INTS11;;ENST00000470030.6_1_1:1248876-1250311:-|nuORF;;ENST00000478641.5_1_1:1248876-1249468:-|nuORF 5.919101715087891 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4070 20.865 29.0 2043800.0 25 0 274380.0 + 17658 KPTGARPSAL 10 74 499.2930732142505 996.571593495301 2 499.2930786013603 MULTI CID FTMS 0 0 0 4069 2187668.5 1.0 0 0.0 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 24.881564428377168 0.4096545554397951 1 KPTGAR 6 4 59.641 0.0 0.0 5.9846 0.0 0.0 0.0 383.1920565240844 383.1920565240844 49.36365118211582 0.0 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 + KPTGAR 5.9846 + + 62 + 1 2.353 51098.0 1.0 974 3094 4069 DOHH2_400M_050219_1,4070 DOHH2_400M_050219_1,4070,KPTGARPSAL False True KPTGARPSAL 20.86488 499.29307860136 3622768320.0 4069.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 8.014518896738688 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4071 20.873 443.0 319220.0 25 0 38900.0 + 5198 DIRVKNLK 8 116 493.312171846642 0 493.3123046755791 PEAK CID FTMS 0 0 0 4069 209751.234375 0.9831472244051094 2 -0.068490982055664 2 Unmodified _DIRVKNLK_ ENSG00000249437|ENST00000517649|NAIP;ENST00000519014.1_1_5:70307584-70316500:-|nuORF 46.020951573049366 0.1173232347498002 1 DK 2 6 16.836 0.0 0.0 1.7099 0.0 0.0 130.10735256226866 608.3523764329308 738.4597289951994 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 DK 1.7099 - 506 + 1 2.353 110521.1 1.0 975 3094 4069 DOHH2_400M_050219_1,4071 DOHH2_400M_050219_1,4071,DIRVKNLK True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4072 20.875 116.0 402920.0 25 0 24374.0 + -1 AGPHPPPACAL 11 83 544.2719220526985 1086.529291172197 2 544.2725097537041 MULTI CID FTMS 0 0 0 4069 217275.84375 0.6868817243817762 -2 0.019195556640625 3 Carbamidomethyl (C) _AGPHPPPAC(Carbamidomethyl (C))AL_ REV__ENST00000475841.2_1_12:132603503-132606470:+|nuORF 6.723162845929126 0.8434276150410019 1 [EP]QDT[WK]A{I|L} 9 -1 + 15.556 0.0 0.0 1.4318 1.4318 76.775 0.0 0.0 0.0 -0.1544041696884299 0.8636500280144368 -0.1544041696884299 9.208187539523752 0 0.0 0.0 0.3494850021680094 0.0 [EP]QDT[WK]A{I|L};[EP]SDAA[WK]A{I|L};[EP][AG]DT[WK]A{I|L};[Q{I|L}][R{M(Oxidation (M))|F}][QT]S[HA] 1.4318;0.58426;0.58426;0.081744 -;-;-;- 104 + 1 2.353 43697.0 1.0 976 3094 4069 DOHH2_400M_050219_1,4072 DOHH2_400M_050219_1,4072,AGPHPPPACAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4073 20.889 800.0 81800.0 25 0 3883.3 + 4765 DEINHVQKTY 10 104 623.8065781918656 1245.598603450531 2 623.8068725466728 MULTI CID FTMS 0 0 0 4069 108365.2109375 1.0 0 0.0 4 Unmodified _DEINHVQKTY_ ENSG00000103510|ENST00000219797|KAT8;nc|ENSG00000103510|Q9H7Z6-2|KAT8 77.04852534044906 0.0187095815199658 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}NHVQKTY 10 0 + 69.558 0.0 0.0 5.5843 5.5843 75.638 0.0 0.0 0.0 0.135733035293029 2.838770596496872 0.135733035293029 0.135733035293029 0 2.5924778212679485 0.0 0.4247425010840047 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}NHVQKTY;[YT]KEWQKTY;[QA]{[SA]|[TG]}NHVQKTY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}NHV[AG]KTY;[YT]KEW[AG]KTY;[YT]KE{[DA]|[EG]}QKTY;[KT]YEWQKTY;[YT]KE{[DA]|[EG]}[AG]KTY;[KT]YE{[DA]|[EG]}QKTY;[KT]YEW[AG]KTY 5.5843;5.5734;5.3564;4.8485;4.8341;4.8341;4.8255;4.0984;4.0863;4.0863 +;-;-;-;-;-;-;-;-;- + 917 1 2.353 55204.2 0.5400000214576721 977 3094 4069 DOHH2_400M_050219_1,4073 DOHH2_400M_050219_1,4073,DEINHVQKTY True True DEINHVQKTY 20.889018 623.806872546673 391596.0625 4069.0 ENSG00000103510|ENST00000219797|KAT8;;nc|ENSG00000103510|Q9H7Z6-2|KAT8 6.981748898824056 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4074 20.903 800.0 150160.0 25 0 19802.0 + + 44058 YLDEADRDKERY 12 90 524.9142821781766 1571.7210171347297 3 524.9144775271416 MULTI CID FTMS 0 0 0 4069 97424.703125 0.9340946795451638 -2 0.019195556640625 5 Unmodified _YIQFWFDFYLM_ ENSG00000140382|ENST00000336216|HMG20A 9.764250979337303 0.8290795630453686 1 Y{I|L}DE[YN][H{I|L}]V 9 -1 65.111 0.0 0.0 4.1427 0.0 0.0 0.0 422.1688936822876 422.1688936822876 50.506981269092606 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 1.1989700043360187 Y{I|L}DE[YN][H{I|L}]V 4.1427 - 174 + 1 2.353 94194.1 0.5 978 3094 4069 DOHH2_400M_050219_1,4074 DOHH2_400M_050219_1,4074,YIQFWFDFYLM False False YLDEADRDKERY 20.902832 524.914477527142 513004.125 4069.0 ENSG00000140382|ENST00000336216|HMG20A 6.813334623972575 3.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4075 20.91 390.0 235560.0 25 0 29737.0 + 5124 DIGGKPASV 9 128 422.2323597300961 842.4501665269921 2 422.2322875857353 MULTI CID FTMS 0 0 0 4069 94143.875 0.9268033663412636 -4 0.1114482879638671 6 Unmodified _DIGGKPASV_ ENSG00000188342|ENST00000340473|GTF2F2 14.838274106304384 0.4350285940865338 1 {NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}NG 7 6 25.768 0.0 0.0 3.0587 0.0 0.0 0.0 68.05137048892811 68.05137048892811 10.283091071188808 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.5102396519197265 {NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}NG 3.0587 - 162 + 1 2.353 76440.0 1.0 979 3094 4069 DOHH2_400M_050219_1,4075 DOHH2_400M_050219_1,4075,DIGGKPASV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4077 20.916 146.0 364560.0 25 0 49676.0 + 25444 NEGTGKSSW 9 83 483.21976641186 964.42497989052 2 483.2199890017509 MULTI CID FTMS 0 0 0 4076 340583.125 0.4601838799976624 4 -0.0658111572265625 1 Unmodified _NEGTGKSSW_ ENSG00000118689|ENST00000406360|FOXO3;ENSG00000150907|ENST00000379561|FOXO1;ENSG00000204060|ENST00000641094|FOXO6;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;nc|ENSG00000118689|O43524-2|FOXO3 22.736283301280096 0.2418982879461534 1 {[QS]|[NT]}KSS{M(Oxidation (M))|F}G 7 5 36.828 0.0 0.0 3.8187 0.0 0.0 0.0 240.06171668843288 240.06171668843288 23.72955589799527 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.1022338482433751 0.3054621874040891 {[QS]|[NT]}KSS{M(Oxidation (M))|F}G 3.8187 - 170 1 2.346 49325.7 1.0 980 3095 4076 DOHH2_400M_050219_1,4077 DOHH2_400M_050219_1,4077,NEGTGKSSW False True NEGTGKSSW 20.91649 483.219989001751 3863849.5 4076.0 ENSG00000204060|ENST00000641094|FOXO6;;nc|ENSG00000118689|O43524-2|FOXO3;;ENSG00000150907|ENST00000379561|FOXO1;;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;;ENSG00000118689|ENST00000406360|FOXO3 3.478412946065267 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4078 20.929 698.0 135390.0 25 0 7345.4 -1 CVCLCCRY 8 142 567.2199383298181 1132.425323726436 2 567.2194091677666 MULTI CID FTMS 0 0 0 4076 101205.296875 0.8698916117092392 -3 0.0688076019287109 2 3 Carbamidomethyl (C) _CVC(Carbamidomethyl (C))LC(Carbamidomethyl (C))C(Carbamidomethyl (C))RY_ ENST00000471187.1_1_1:43778861-43779798:+|nuORF 6.354104778181461 0.7857632046190106 1 [PG]KDNYSA 8 -1 35.715 0.0 0.0 3.1539 0.0 0.0 0.0 297.03168731005206 297.03168731005206 12.493356539070724 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2887254899964357 0.7302046884880937 [PG]KDNYSA 3.1539 - 575 1 2.346 71699.5 1.0 981 3095 4076 DOHH2_400M_050219_1,4078 DOHH2_400M_050219_1,4078,CVCLCCRY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4080 20.933 24.0 1931500.0 25 0 200970.0 + 837 AETGQVQKI 9 74 487.2688999824776 972.5232470317552 2 487.2694274783134 MULTI CID FTMS 0 0 0 4079 2033557.5 1.0 0 0.0 1 Unmodified _AETGQVQKI_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 24.020572477871973 0.2255576514309169 1 {[CP]|[EA]}T{[QG]|[NA]}VQK{I|L} 9 0 + 35.747 0.0 0.0 3.6757 3.6757 70.021 0.0 0.0 0.0 7.147642715192511 0.7918124604762511 0.7918124604762511 0.7918124604762511 0 0.4247425010840047 0.0 0.0 0.7396518287104438 + + {[CP]|[EA]}T{[QG]|[NA]}VQK{I|L};{[CP]|[EA]}T{[QG]|[NA]}VQ{I|L}K;{[CP]|[EA]}T{[QG]|[NA]}V[AG]K{I|L};{[CP]|[EA]}T{[QG]|[NA]}V[AG]{I|L}K;{[CP]|[EA]}T[{I|L}A]T[{I|L}T][PG];{[QV]|[N{I|L}]|[RA]|[KV]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}A][WP] 3.6757;3.5942;2.7288;2.6474;1.7125;0.019365 +;-;-;-;-;- + 172 + 1 2.346 41028.0 1.0 982 3096 4079 DOHH2_400M_050219_1,4080 DOHH2_400M_050219_1,4080,AETGQVQKI False True AETGQVQKI 20.933372 487.269427478313 9250182.0 4079.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 4.6335625648498535 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4081 20.937 212.0 295880.0 25 0 15561.0 + 29900 QSDMGREAAY 10 104 564.2429173827348 1126.4712818322696 2 564.2431518435478 MULTI CID FTMS 0 0 0 4079 191813.65625 0.6712359207255253 -2 0.068490982055664 2 Unmodified _QSDMGREAAY_ ENSG00000130748|ENST00000253047|TMEM160 47.594388314883695 0.0942698883389255 1 QSDM 4 6 39.909 0.0 0.0 3.5429 0.0 0.0 0.0 662.2898995138128 662.2898995138128 15.445312593723983 0.0 0.0 0.0 0 0.2742275032520141 1.0 0.0 0.0 + QSDM 3.5429 + + 61 + 1 2.346 52516.3 1.0 983 3096 4079 DOHH2_400M_050219_1,4081 DOHH2_400M_050219_1,4081,QSDMGREAAY True True QSDMGREAAY 20.937409 564.243151843548 1321545.25 4079.0 ENSG00000130748|ENST00000253047|TMEM160 7.486671129862468 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4084 20.948 206.0 265610.0 25 0 16711.0 + 2470 AQYEDIAQK 9 96 533.2639390730956 1064.513325212991 2 533.2646362185478 MULTI CID FTMS 0 0 0 4083 177167.484375 0.14110253952537 -10 0.2603359222412109 1 Unmodified _AQYEDIAQK_ ENSG00000167768|ENST00000252244|KRT1 34.93206674587334 0.1032771302489716 1 [QA]YED{I|L}AQK 9 0 + 52.063 0.0 0.0 4.8908 4.8908 84.01 0.0 0.0 0.0 38.9640281204268 13.848365028771106 13.848365028771106 9.208187539523747 0 0.9247425010840048 0.0 0.0 0.5402877273156862 + + [QA]YED{I|L}AQK;[QA]YED{I|L}A[AG]K;[QA]Y{[VA]|[{I|L}G]}EEQK 4.8908;4.0258;1.6255 +;-;- + 91 + 1 2.346 48360.2 1.0 984 3098 4083 DOHH2_400M_050219_1,4084 DOHH2_400M_050219_1,4084,AQYEDIAQK True True AQYEDIAQK 20.947863 533.264636218548 9275703.0 4083.0 ENSG00000167768|ENST00000252244|KRT1 7.041168530782064 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4085 20.962 800.0 158030.0 25 0 10078.0 + 36902 TEQSQIKGY 9 150 527.2638001531993 1052.5130473731986 2 527.2635375857353 MULTI CID FTMS 0 0 0 4083 78719.484375 0.3172986485521353 -9 0.2139091491699218 2 Unmodified _TEQSQIKGY_ ENSG00000205155|ENST00000587708|PSENEN 55.50274090549119 0.0285720310785888 1 {[ET]|[MV]}AGSQ{I|L}KGY 10 2 + 64.027 0.0 0.0 6.0832 6.0832 84.99 0.0 0.0 0.0 32.20348720186986 12.597046968434142 12.597046968434142 6.53212513775344 0 1.3226825097560422 0.0 0.5 0.9247425010840048 {[ET]|[MV]}AGSQ{I|L}KGY;{[ET]|[MV]}QSQ{I|L}KGY;{[ET]|[MV]}AGS[AG]{I|L}KGY;{[ET]|[MV]}QS[AG]{I|L}KGY;[DP]N{I|L}S[KP]ADP;{[QS]|[NT]}[VP][VP]SGADP;[DP][KA][VP]SGADP;[AG]SQ{I|L}[PA][TP]DP;{[MG]|[TS]}YKKSGADP;YY{I|L}S[KP]ADP 6.0832;5.4626;5.2125;4.5877;3.6929;2.8952;2.8751;2.7596;2.7547;2.7116 -;+;-;-;-;-;-;-;-;- + 886 + 1 2.346 97136.7 0.5799999833106995 985 3098 4083 DOHH2_400M_050219_1,4085 DOHH2_400M_050219_1,4085,TEQSQIKGY True True TEQSQIKGY 20.961695 527.263537585735 1010033.75 4083.0 ENSG00000205155|ENST00000587708|PSENEN 6.509203592936198 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4086 20.976 800.0 167770.0 25 0 20842.0 + 23868 LVKTKEEL 8 141 480.2934637411413 958.5723745490824 2 480.2944213747978 MULTI CID FTMS 0 0 0 4083 92818.234375 0.6180052937101975 -6 0.1004962921142578 3 Unmodified _LVKTKEEL_ ENSG00000092820|ENST00000367075|EZR;ENST00000486888.1_1_3:104221713-104221830:+|nuORF 29.081581746732265 0.4323690340403521 1 {I|L}VKT 4 4 60.349 0.0 0.0 6.2958 0.0 0.0 0.0 514.2513641801535 514.2513641801535 42.25054710168188 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.4247425010840047 + {I|L}VKT 6.2958 + + 271 + 1 2.346 102322.6 0.5699999928474426 986 3098 4083 DOHH2_400M_050219_1,4086 DOHH2_400M_050219_1,4086,LVKTKEEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4089 20.985 120.0 559040.0 25 0 78049.0 + -1 IQRLETMK 8 82 517.7872957712569 0 517.7869140505791 PEAK CID FTMS 0 0 0 4088 427020.15625 0.9173149798440556 1 -0.0087127685546875 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.4320151646958274 1 KTT 3 -1 37.747 0.0 0.0 3.6522 0.0 0.0 63.9992960989535 636.3480657220509 700.3473618210045 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 1.274227503252014 0.0 KTT 3.6522 - 128 + 1 2.346 58093.6 1.0 987 3100 4088 DOHH2_400M_050219_1,4089 DOHH2_400M_050219_1,4089,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4090 20.988 191.0 393280.0 25 0 52175.0 + 35225 SSDPYHSGY 9 97 506.7038685259407 1011.3931841186812 2 506.7041503787041 MULTI CID FTMS 0 0 0 4088 333706.53125 1.0 0 0.0 2 Unmodified _SSDPYHSGY_ ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT 74.42276476219924 0.019389277360085 1 {[CA]|SS}DPYHSGY 9 0 + 51.436 0.0 0.0 5.0856 5.0856 88.182 0.0 0.0 0.0 29.039843494254995 12.98332479720628 12.98332479720628 20.41956270212445 0 0.7614393726401688 0.0 0.75 0.0 + + {[CA]|SS}DPYHSGY;{[CA]|SS}D[HT]S[HN]Q;{[CA]|SS}D[H{I|L}]{M(Oxidation (M))|F}SGY;{[CA]|SS}[HT]HHSGY;{[CA]|SS}DP{[CA]|SS}{[NV]|[RG]}GY;{[CA]|SS}DP{[CA]|SS}[RN]Y;{[CA]|SS}[HT]DS[HN]Q;{[CA]|SS}[HT]SD[HN]Q;{[CA]|SS}D[HT][{M(Oxidation (M))|F}V]GY;[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]YGS[HN]Q 5.0856;3.0667;2.6498;2.4353;2.1737;1.9996;1.9726;1.9726;1.9038;1.8209 +;-;-;-;-;-;-;-;-;- + 379 + 1 2.346 63739.5 1.0 988 3100 4088 DOHH2_400M_050219_1,4090 DOHH2_400M_050219_1,4090,SSDPYHSGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4092 20.993 127.0 520850.0 25 0 75650.0 + 12304 GSDRSSFSHY 10 101 381.5003849593065 1141.4793254781196 3 381.5002624392509 MULTI CID FTMS 0 0 0 4091 262926.53125 0.3689894617405907 -6 0.0785789489746093 1 Unmodified _GSDRSSFSHY_ ENSG00000142864|ENST00000361219|SERBP1;ENST00000510079.2_1_4:79102321-79102666:-|nuORF;nc|ENSG00000142864|Q8NC51|SERBP1 8.745405648335112 0.6861838735306406 1 [SG][KC]DV{M(Oxidation (M))|F}SHY 10 4 + 38.949 0.0 0.0 3.4121 3.4121 71.426 0.0 0.0 0.0 17.293518720706306 2.430380486862944 2.430380486862944 2.430380486862944 0 0.2396518287104437 1.2218487496163564 0.0 0.0 [SG][KC]DV{M(Oxidation (M))|F}SHY;[SG][KC]DV{M(Oxidation (M))|F}SYH;[SG][KC]SHHSHY;[SG][KC]SHHSYH 3.4121;3.1992;2.5606;2.3477 -;-;-;- 184 + 1 2.346 60585.4 1.0 989 3101 4091 DOHH2_400M_050219_1,4092 DOHH2_400M_050219_1,4092,GSDRSSFSHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4093 21.005 667.0 271040.0 25 0 24744.0 + 12305 GSDRSSFSHY 10 140 571.7464731889268 1141.4783934446534 2 571.7463867068291 MULTI CID FTMS 0 0 0 4091 127659.375 0.3537770469354954 -5 0.0597000122070312 2 Unmodified _GSDRSSFSHY_ ENSG00000142864|ENST00000361219|SERBP1;ENST00000510079.2_1_4:79102321-79102666:-|nuORF;nc|ENSG00000142864|Q8NC51|SERBP1 29.84058131909904 0.2982332456971691 1 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[CP]|[EA]}{M(Oxidation (M))|F}SHY 9 6 + 52.225 0.0 0.0 4.5752 4.5752 76.66 0.0 0.0 0.0 3.4849734235723275 26.21060275088495 3.4849734235723275 3.462586316940012 0 1.1989700043360187 0.9208187539523752 0.9634679910804403 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[CP]|[EA]}{M(Oxidation (M))|F}SHY;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}YRDHY;[QT]V{[QD]|[EN]|[WG]|[KD]|[RS]}HDHY;[HS][HS][C(Carbamidomethyl (C))K]SHY;[QT][Y{I|L}]{[QC]|[C(Carbamidomethyl (C))A]}SHY;[VP]{[{M(Oxidation (M))|F}D]|MM}M{M(Oxidation (M))|F}SHY;[WC(Carbamidomethyl (C))]SR{M(Oxidation (M))|F}SHY;[VP]{[{M(Oxidation (M))|F}D]|MM}{I|L}HDHY;[{I|L}T]N{[QD]|[EN]|[WG]|[KD]|[RS]}HDHY;Y{[QG]|[NA]}G{M(Oxidation (M))|F}[PS]SHY 4.5752;4.2718;4.1685;3.9127;3.3159;3.2018;3.1065;3.0426;3.0371;3.0167 -;-;-;-;-;-;-;-;-;- 1050 1 2.346 136607.4 1.0 990 3101 4091 DOHH2_400M_050219_1,4093 DOHH2_400M_050219_1,4093,GSDRSSFSHY False True GSDRSSFSHY 21.005027 571.746386706829 4384928.375 4091.0 nc|ENSG00000142864|Q8NC51|SERBP1;;ENST00000510079.2_1_4:79102321-79102666:-|nuORF;;ENSG00000142864|ENST00000361219|SERBP1 2.085310618082682 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4094 21.01 273.0 250410.0 25 0 16163.0 -1 QPHYRLCL 8 105 543.7803784914148 0 543.7808105349541 PEAK CID FTMS 0 0 0 4091 119390.015625 0.7717138416739318 1 -0.0217914581298828 3 Carbamidomethyl (C) _QPHYRLC(Carbamidomethyl (C))L_ ENSG00000166037|ENST00000325542|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 32.116972079565 0.2111542247894177 1 PQDT[WK]A 7 -1 26.049 0.0 0.0 2.3996 0.0 0.0 128.0577998470573 128.07192407779533 256.12972392485267 0.0 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.3494850021680094 0.3252574989159953 PQDT[WK]A 2.3996 - 271 + 1 2.346 57975.5 1.0 991 3101 4091 DOHH2_400M_050219_1,4094 DOHH2_400M_050219_1,4094,QPHYRLCL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4097 21.019 131.0 433400.0 25 0 75025.0 + -1 TVRMEKEV 8 96 504.264703086487 0 504.2643310427666 PEAK CID FTMS 0 0 0 4096 326150.90625 0.5865341753217983 -55 0.9549770355224608 1 Oxidation (M) _TVRM(Oxidation (M))EKEV_ REV__ENSG00000197102|ENST00000360184|DYNC1H1 7.910154910731844 0.5650536163073903 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.346 48681.6 1.0 992 3103 4096 DOHH2_400M_050219_1,4097 DOHH2_400M_050219_1,4097,TVRMEKEV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4101 21.044 800.0 132980.0 25 0 8737.1 + 7261 EESRGNNQW 9 150 560.2439351195967 1118.4733173059933 2 560.2445556521416 MULTI CID FTMS 0 0 0 4100 116611.875 0.2465404310701541 -8 0.0858402252197265 1 Unmodified _EESRGNNQW_ ENSG00000099860|ENST00000215631|GADD45B;ENST00000592937.1_1_19:2477233-2477596:+|nuORF 49.93300154707207 0.0405168250806675 1 EE[WD]{I|L}NQW 8 4 + 56.635 0.0 0.0 5.0636 5.0636 74.296 0.0 0.0 0.0 18.98438542421129 25.344654643680844 18.98438542421129 0.5115252244738144 0 1.25 1.3979400086720375 1.7302046884880935 0.0 EE[WD]{I|L}NQW;EE[WD]{I|L}NGAW;EE[WD]{I|L}GGQW;EE[WD]{I|L}GGGAW;EE[WP]MNQ[VS];EE[WP]MNGA[VS];EE{[DS]|[MA]|[CV]|TT}VPEEW;[DP]D[MT]{I|L}NQW;EEG{[{M(Oxidation (M))|F}H]|[RQ]}WEW;[DP]D[MT]{I|L}NGAW 5.0636;5.0178;4.2355;4.1946;3.5531;3.5122;3.42;3.3585;3.3336;3.3175 -;-;-;-;-;-;-;-;-;- 1575 1 2.346 82372.9 0.5199999809265137 993 3106 4100 DOHH2_400M_050219_1,4101 DOHH2_400M_050219_1,4101,EESRGNNQW True True EESRGNNQW 21.043606 560.244555652142 5436605.5 4100.0 ENST00000592937.1_1_19:2477233-2477596:+|nuORF;;ENSG00000099860|ENST00000215631|GADD45B 8.226640542348227 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4102 21.057 800.0 128200.0 25 0 9609.3 + -1 CCGHHRCPH 9 157 582.2251771418183 1162.4358013504366 2 582.2269164919853 MULTI CID FTMS 0 0 0 4100 93848.890625 0.1236476699681489 -12 0.1671409606933593 2 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))GHHRCPH_ REV__ENSG00000204930|ENST00000423537|FAM221B;REV__nc|ENSG00000204930|A6H8Z2-2|FAM221B 4.75600775471527 0.7486543447549536 1 [MT]A 3 -1 29.749 0.0 0.0 2.5592 0.0 0.0 0.0 856.2870336104553 856.2870336104553 12.041199826559248 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [MT]A 2.5592 - 1252 1 2.346 80420.4 0.5299999713897705 994 3106 4100 DOHH2_400M_050219_1,4102 DOHH2_400M_050219_1,4102,CCGHHRCPH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4104 21.064 194.0 313440.0 25 0 42940.0 + -1 EKLNGQLMK 9 75 538.7918405772559 1075.5691282213118 2 538.7922241091728 MULTI CID FTMS 0 0 0 4103 321502.9375 0.9451790155271428 10 -0.18798828125 1 Oxidation (M) _EKLNGQLM(Oxidation (M))K_ REV__ENSG00000129596|ENST00000250535|CDO1;REV__ENST00000502631.1_1_5:115145323-115152339:-|nuORF 19.256988751693697 0.3154191944385105 1 T{M(Oxidation (M))|F}K 3 -1 34.314 0.0 0.0 3.1903 0.0 0.0 681.3803292484587 0.0 681.3803292484587 0.0 19.537632942370266 0.0 0.0 0 1.0 0.0 0.0 0.2887254899964357 T{M(Oxidation (M))|F}K 3.1903 - 82 + 1 2.346 50302.6 1.0 995 3107 4103 DOHH2_400M_050219_1,4104 DOHH2_400M_050219_1,4104,EKLNGQLMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4105 21.066 106.0 426770.0 25 0 36829.0 + 32826 SEGDITQKGY 10 87 549.2581586807623 1096.5017644283246 2 549.2591430544853 MULTI CID FTMS 0 0 0 4103 358235.28125 0.8357356861260717 -1 0.0302066802978515 2 Unmodified _SEGDITQKGY_ ENSG00000066084|ENST00000301180|DIP2B;ENSG00000151240|ENST00000280886|DIP2C;ENSG00000160305|ENST00000417564|DIP2A;ENST00000549620.5_1_12:50898851-51072694:+|nuORF;nc|ENSG00000160305|Q14689-2|DIP2A;nc|ENSG00000160305|Q14689-3|DIP2A;nc|ENSG00000160305|Q14689-4|DIP2A;nc|ENSG00000160305|Q14689-6|DIP2A 34.93206674587334 0.2110832994570416 1 {[ES]|[DT]|[{I|L}C]}GD{I|L}TQ[KG]Y 10 0 + 32.593 0.0 0.0 2.9724 2.9724 82.696 0.0 0.0 0.0 18.61310292633256 6.690067809585756 6.690067809585756 32.592503013052934 0 1.1677353201839438 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}GD{I|L}TQ[KG]Y 2.9724 + + 126 + 1 2.346 38520.5 1.0 996 3107 4103 DOHH2_400M_050219_1,4105 DOHH2_400M_050219_1,4105,SEGDITQKGY False True SEGDITQKGY 21.065975 549.259143054485 1701319.75 4103.0 ENSG00000160305|ENST00000417564|DIP2A;;ENSG00000151240|ENST00000280886|DIP2C;;nc|ENSG00000160305|Q14689-4|DIP2A;;ENST00000549620.5_1_12:50898851-51072694:+|nuORF;;nc|ENSG00000160305|Q14689-6|DIP2A;;ENSG00000066084|ENST00000301180|DIP2B;;nc|ENSG00000160305|Q14689-3|DIP2A;;nc|ENSG00000160305|Q14689-2|DIP2A 6.825928846995036 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4106 21.07 194.0 295690.0 25 0 28226.0 + 5340 DLGRKITSA 9 86 480.77745070114537 959.5403484690908 2 480.7774536013603 MULTI CID FTMS 0 0 0 4103 158232.640625 0.6922526799878405 -2 0.0342445373535156 3 Unmodified _DLGRKITSA_ ENSG00000100883|ENST00000216774|SRP54;ENST00000546080.5_1_14:35465915-35470150:+|nuORF;ENST00000553544.1_1_14:35465915-35466038:+|nuORF;ENST00000555317.5_1_14:35465915-35468856:+|nuORF;ENST00000555535.1_1_14:35465915-35473764:+|nuORF 26.020703789607367 0.2001090068861241 1 D{I|L} 2 7 41.471 0.0 0.0 4.3219 0.0 0.0 0.0 728.404183070702 728.404183070702 7.496797216834544 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 + D{I|L} 4.3219 + + 79 + 1 2.346 48094.5 1.0 997 3107 4103 DOHH2_400M_050219_1,4106 DOHH2_400M_050219_1,4106,DLGRKITSA False True DLGRKITSA 21.06969 480.77745360136 718869.5625 4103.0 ENST00000555535.1_1_14:35465915-35473764:+|nuORF;;ENSG00000100883|ENST00000216774|SRP54;;ENST00000555317.5_1_14:35465915-35468856:+|nuORF;;ENST00000546080.5_1_14:35465915-35470150:+|nuORF;;ENST00000553544.1_1_14:35465915-35466038:+|nuORF 6.089896043141683 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4108 21.083 581.0 113850.0 25 0 6685.6 + 28425 PSYGGQQQSY 10 109 557.7435337421041 1113.472514551008 2 557.7439453005791 MULTI CID FTMS 0 0 0 4107 136808.03125 0.9691972070800198 -1 0.0122699737548828 1 Unmodified _PSYGGQQQSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 66.45667989310934 0.0196491505995134 1 [PS]YGGQQQSY 10 0 + 65.851 0.0 0.0 5.9141 5.9141 81.675 0.0 0.0 0.0 12.296962438796156 44.47621246364342 12.296962438796156 3.521825181113627 0 0.8935078169319297 1.0 1.5044321917401078 0.4247425010840047 + + [PS]YGGQQQSY;[PS]YNQQQSY;[PS]YGGQQ[AG]SY;[PS]YGG[AG]QQSY;[PS]YGGQ[AG]QSY;[PS]YN[AG]QQSY;[PS]YNQ[AG]QSY;[PS]YNQQ[AG]SY;{[{M(Oxidation (M))|F}C]|[YS]}PGGQQQSY;[PS]YGG[AG]Q[AG]SY 5.9141;5.5978;5.091;5.091;5.091;4.7708;4.7708;4.7708;4.5176;4.2712 +;-;-;-;-;-;-;-;-;- + 1419 1 2.346 54120.9 1.0 998 3108 4107 DOHH2_400M_050219_1,4108 DOHH2_400M_050219_1,4108,PSYGGQQQSY True True PSYGGQQQSY 21.083275 557.743945300579 548675.75 4107.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 6.455035368601481 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4109 21.097 800.0 149250.0 25 0 12379.0 + + 35032 SIDDQSQQSY 10 140 585.748748121251 1169.4829433093018 2 585.7488281130791 MULTI CID FTMS 0 0 0 4107 114879.46875 0.3459132587553535 -4 0.0505504608154296 2 Unmodified _SQQSQDDISY_ ENST00000522203.5_1_5:143545115-143549519:-|nuORF;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;ENSG00000145817|ENST00000274496|YIPF5;nc|ENSG00000145817|Q969M3-3|YIPF5 57.72198328787511 0.0425618229276495 1 {[TV]|[{I|L}S]}DDQSQ 7 -1 35.652 0.0 0.0 3.0485 0.0 0.0 0.0 393.1373371904144 393.1373371904144 6.979940022137541 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.5356668758921829 0.0 {[TV]|[{I|L}S]}DDQSQ 3.0485 - 601 1 2.346 89841.7 0.5699999928474426 999 3108 4107 DOHH2_400M_050219_1,4109 DOHH2_400M_050219_1,4109,SQQSQDDISY False False SIDDQSQQSY 21.097106 585.748828113079 1573291.25 4107.0 ENST00000522203.5_1_5:143545115-143549519:-|nuORF;;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;;ENSG00000145817|ENST00000274496|YIPF5;;nc|ENSG00000145817|Q969M3-3|YIPF5 6.388797760009766 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4112 21.106 100.0 708670.0 25 0 50386.0 + 17432 KNDIEIKKL 9 109 367.56080245214304 1099.6605779566291 3 367.5605651736259 MULTI CID FTMS 0 0 0 4111 279255.625 0.0818157800636905 13 -0.1946659088134765 1 Unmodified _KNDIEIKKL_ REV__ENSG00000145241|ENST00000273853|CENPC;REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF;REV__nc|ENSG00000145241|Q03188-2|CENPC 20.453626601364224 0.2830276176381075 1 [QP]AAD{I|L}V 7 -1 20.462 0.0 0.0 1.8608 0.0 0.0 0.0 402.2696227166479 402.2696227166479 2.270516760337877 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.5 [QP]AAD{I|L}V 1.8608 - 83 1 2.346 63986.4 1.0 1000 3110 4111 DOHH2_400M_050219_1,4112 DOHH2_400M_050219_1,4112,KNDIEIKKL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4113 21.12 800.0 80437.0 25 0 5897.7 + -1 DSELSCCDMEQ 11 95 658.7233500035791 1315.432147073958 2 658.7245971560478 MULTI CID FTMS 0 0 0 4111 112720.984375 0.9434420081394128 1 -0.0186233520507812 2 Carbamidomethyl (C) _DSELSC(Carbamidomethyl (C))CDMEQ_ REV__ENSG00000115827|ENST00000375255|DCAF17;REV__ENST00000493106.1_1_2:172325537-172330486:+|nuORF;REV__nc|ENSG00000115827|Q5H9S7-2|DCAF17 27.628801355627647 0.4434699450731472 1 NY 2 -1 14.68 0.0 0.0 1.116 0.0 0.0 1020.3155221733706 0.0 1020.3155221733706 0.0 -0.7378621416091864 -0.7378621416091864 0.0 0 0.0 0.0 0.0 0.2742275032520141 NY 1.116 - 138 + 1 2.346 56760.2 0.6000000238418579 1001 3110 4111 DOHH2_400M_050219_1,4113 DOHH2_400M_050219_1,4113,DSELSCCDMEQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4115 21.13 443.0 262620.0 25 0 30675.0 + 17659 KPTGARPSAL 10 98 499.2930732142505 996.571593495301 2 499.2931091189384 MULTI CID FTMS 0 0 0 4114 213471.359375 0.0975793907417874 17 -0.3146228790283203 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 27.22323531849824 0.3570408936368626 1 KPTG 4 6 54.68 0.0 0.0 5.4869 0.0 0.0 0.0 610.3266695611936 610.3266695611936 43.0866814795592 0.0 0.0 0.0 0 1.424742501084005 0.0 0.8494850021680094 0.0 + KPTG 5.4869 + + 71 + 1 2.346 93325.0 1.0 1002 3111 4114 DOHH2_400M_050219_1,4115 DOHH2_400M_050219_1,4115,KPTGARPSAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4116 21.136 308.0 250150.0 25 0 39406.0 34643 SPPPPPPPP 9 89 441.7399142304098 881.4652755276196 2 441.7399474978447 MULTI CID FTMS 0 0 0 4114 145670.640625 0.2536710371121994 -7 0.1006126403808593 2 Unmodified _SPPPPPPPP_ ENSG00000099999|ENST00000382363|RNF215;ENSG00000100312|ENST00000216139|ACR;ENSG00000103479|ENST00000262133|RBL2;ENSG00000107816|ENST00000454422|LZTS2;ENSG00000109920|ENST00000263773|FNBP4;ENSG00000120549|ENST00000376454|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;ENSG00000136754|ENST00000376140|ABI1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000164944|ENST00000297591|VIRMA;ENSG00000184863|ENST00000401878|RBM33;ENSG00000260428|ENST00000567180|SCX;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;nc|ENSG00000109920|Q8N3X1-2|FNBP4;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000015285|ENST00000376701|WAS;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000100201|ENST00000403230|DDX17;REV__ENSG00000107816|ENST00000454422|LZTS2;REV__ENSG00000112541|ENST00000539869|PDE10A;REV__ENSG00000127666|ENST00000248244|TICAM1;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENSG00000141867|ENST00000679869|BRD4;REV__ENSG00000143006|ENST00000371445|DMRTB1;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000204334|ENST00000697325|ERICH2;REV__ENSG00000242265|ENST00000612748|PEG10;REV__ENST00000216019.11_1_22:38881942-38884127:-|nuORF;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF;REV__ENST00000361272.8_2_8:17102747-17104366:-|nuORF;REV__ENST00000431312.2_1_22:38881942-38884127:-|nuORF;REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF;REV__ENST00000482108.1_2_7:94293788-94294991:+|nuORF;REV__ENST00000508096.1_1_10:126605730-126631034:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100201|Q92841-1|DDX17;REV__nc|ENSG00000100201|Q92841-2|DDX17;REV__nc|ENSG00000100201|Q92841-3|DDX17;REV__nc|ENSG00000139218|Q99590-2|SCAF11;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000168066|Q15637-5|SF1;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 101.72198241140316 0.010086100337927 1 [PS]PPPPPPP 9 0 + 87.4 0.0 0.0 9.9153 9.9153 97.945 0.0 0.0 0.0 20.737862141609185 72.62882999526556 20.737862141609185 22.21848749616356 0 1.873712505420024 2.0 1.8539171939081167 0.0 + + [PS]PPPPPPP;{[HG]|PP}SPPPPPP;[PS][YK]PPPP;[PS]P[YK]PPP;[PS]PP[YK]PP;{[HG]|PP}S[YK]PPP;{[HG]|PP}SP[YK]PP;{[NV]|[RG]}[YV]PPPP;[PS][KQ][QT]PP;{[HG]|PP}[YK]SPPP 9.9153;7.3946;6.8773;5.8087;5.638;3.2881;3.1173;2.9921;2.9435;2.5146 +;-;-;-;-;-;-;-;-;- + 215 1 2.346 65552.8 1.0 1003 3111 4114 DOHH2_400M_050219_1,4116 DOHH2_400M_050219_1,4116,SPPPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4117 21.141 265.0 188100.0 25 0 9948.0 + 363 AEDEGVSQRKF 11 87 422.5423896721936 1264.6053396167808 3 422.5419189333916 MULTI CID FTMS 0 0 0 4114 100270.578125 1.0 0 0.0 3 Unmodified _AEDEGVSQRKF_ ENSG00000213719|ENST00000375784|CLIC1 7.846045518447754 0.8381297814158264 1 {M(Oxidation (M))|F} 1 10 13.495 0.0 0.0 1.0671 0.0 0.0 1099.526266596076 0.0 1099.526266596076 0.0 1.712113404111033 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0671 + + 76 + 1 2.346 44733.4 1.0 1004 3111 4114 DOHH2_400M_050219_1,4117 DOHH2_400M_050219_1,4117,AEDEGVSQRKF False True AEDEGVSQRKF 21.140699 422.541918933392 337961.09375 4114.0 ENSG00000213719|ENST00000375784|CLIC1 4.645191510518392 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4118 21.155 800.0 117170.0 25 0 22395.0 + 14752 ILDERHDNY 9 107 587.7785817683935 1173.5426106035868 2 587.7770873904228 MULTI CID FTMS 0 0 0 4114 93100.09375 0.8906572267619028 1 -0.0347728729248046 4 Unmodified _ILDERHDNY_ ENSG00000023287|ENST00000025008|RB1CC1;ENST00000522957.1_1_8:53536344-53555381:-|nuORF;nc|ENSG00000023287|Q8TDY2-2|RB1CC1 51.41523569358685 0.0372669606867193 1 {I|L}{I|L}DE 4 5 63.928 0.0 0.0 5.4474 0.0 0.0 0.0 700.2794283502561 700.2794283502561 32.205684693577226 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3494850021680094 0.0 + {I|L}{I|L}DE 5.4474 + + 412 + 1 2.346 76446.7 0.5099999904632568 1005 3111 4114 DOHH2_400M_050219_1,4118 DOHH2_400M_050219_1,4118,ILDERHDNY True True ILDERHDNY 21.154531 587.777087390423 462942.90625 4114.0 ENST00000522957.1_1_8:53536344-53555381:-|nuORF;;nc|ENSG00000023287|Q8TDY2-2|RB1CC1;;ENSG00000023287|ENST00000025008|RB1CC1 7.198483943939209 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4121 21.163 93.0 505460.0 25 0 47453.0 + 36861 TEMESQKQL 9 89 547.2620859092257 1092.5096188852513 2 547.2622558474541 MULTI CID FTMS 0 0 0 4120 529337.6875 1.0 0 0.0 1 Unmodified _TEMESQKQL_ ENSG00000087269|ENST00000416614|NOP14;ENST00000507120.1_1_4:2939942-2943434:-|nuORF;nc|ENSG00000087269|P78316-2|NOP14 26.268140514670165 0.1969607489560049 1 QKNM[DP] 6 9 32.814 0.0 0.0 3.0035 0.0 0.0 361.1846965634829 0.0 361.1846965634829 0.0 19.940426212933367 0.0 0.0 0 0.9247425010840048 0.0 0.5941876774005249 0.0 QKNM[DP] 3.0035 - 208 + 1 2.362 42411.0 1.0 1006 3113 4120 DOHH2_400M_050219_1,4121 DOHH2_400M_050219_1,4121,TEMESQKQL False True TEMESQKQL 21.163391 547.262255847454 2147188.25 4120.0 ENST00000507120.1_1_4:2939942-2943434:-|nuORF;;nc|ENSG00000087269|P78316-2|NOP14;;ENSG00000087269|ENST00000416614|NOP14 4.183456142743428 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4122 21.177 800.0 151280.0 25 0 8422.5 + 18069 KTDSTGTHSLY 11 127 605.2911504702217 1208.5677480072434 2 605.2913696169853 MULTI CID FTMS 0 0 0 4120 102112.328125 0.1315712661979979 -8 0.1354084014892578 2 Unmodified _KTDSTGTHSLY_ ENSG00000105738|ENST00000222345|SIPA1L3;ENSG00000116991|ENST00000674635|SIPA1L2;ENSG00000197555|ENST00000381232|SIPA1L1;ENSG00000213445|ENST00000534313|SIPA1;nc|ENSG00000197555|O43166-3|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1 97.74103586103692 0.0003961982456404 1 KTDSS[TA]HS{I|L}Y 11 2 + 71.252 0.0 0.0 5.8956 5.8956 84.805 0.0 0.0 0.0 46.0886774111609 15.070623213458036 15.070623213458036 6.986188170345059 0 2.6747425010840047 0.0 1.079689690656103 0.0 KTDSS[TA]HS{I|L}Y;KTQ[W{M(Oxidation (M))|F}]HS{I|L}Y;K[PS]K{M(Oxidation (M))|F}CHS{I|L}Y;KT[AG][W{M(Oxidation (M))|F}]HS{I|L}Y;[QA]{I|L}K{M(Oxidation (M))|F}CHS{I|L}Y;K[QA]{I|L}{M(Oxidation (M))|F}CHS{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[TA]HS{I|L}Y;[QA]K{I|L}{M(Oxidation (M))|F}CHS{I|L}Y;{[{M(Oxidation (M))|F}D]|MM}[KQ][TA]HS{I|L}Y;KTDSS[TA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QP 5.8956;5.3176;4.7214;4.3167;4.2454;4.0776;3.8516;3.6016;3.4569;3.175 -;-;-;-;-;-;-;-;-;- 738 + 1 2.362 90351.1 0.5299999713897705 1007 3113 4120 DOHH2_400M_050219_1,4122 DOHH2_400M_050219_1,4122,KTDSTGTHSLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4123 21.18 110.0 524020.0 25 0 29663.0 42208 VSFRRDHLL 9 99 381.5523926291721 1141.6353484877163 3 381.5524474978447 MULTI CID FTMS 0 0 0 4120 316186.90625 1.0 0 0.0 3 Unmodified _VSFRRDHLL_ ENSG00000118217|ENST00000367942|ATF6;ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B 10.799506525563784 0.5443532743200366 1 VPHH 4 7 43.101 0.0 0.0 3.7754 0.0 0.0 0.0 668.3717150644263 668.3717150644263 30.88232612581013 0.0 0.0 0.0 0 0.2302046884880938 0.8860566476931632 0.0 0.0 VPHH 3.7754 - 101 + 1 2.362 55933.0 1.0 1008 3113 4120 DOHH2_400M_050219_1,4123 DOHH2_400M_050219_1,4123,VSFRRDHLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4124 21.193 800.0 58243.0 25 0 3023.7 + -1 EENRNENSGNSW 12 95 718.2955418980807 1434.5765308629614 2 718.2952758669853 MULTI CID FTMS 0 0 0 4120 82590.078125 0.8184854311322901 -1 0.004058837890625 4 Carbamidomethyl (C),Oxidation (M) _RDM(Oxidation (M))PHPFC(Carbamidomethyl (C))SSW_ ENSG00000139218|ENST00000369367|SCAF11;nc|ENSG00000139218|Q99590-2|SCAF11 27.628801355627647 0.4434699450731472 1 {[WS]|[C(Carbamidomethyl (C)){I|L}]}D[HV]{M(Oxidation (M))|F}NSGNSW 12 -1 + 105.5 0.0 0.0 7.3544 7.3544 90.24 0.0 0.0 0.0 11.95046257204389 9.098233696509112 9.098233696509112 9.098233696509112 0 0.8807196863200843 1.3979400086720375 2.4049471895720984 1.086696871556164 {[WS]|[C(Carbamidomethyl (C)){I|L}]}D[HV]{M(Oxidation (M))|F}NSGNSW;{[WS]|[C(Carbamidomethyl (C)){I|L}]}D[HV]{M(Oxidation (M))|F}NSGGGSW;{[CT]|[{M(Oxidation (M))|F}G]}S[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}NSGNSW;{[WS]|[C(Carbamidomethyl (C)){I|L}]}D[HV]{M(Oxidation (M))|F}GGSGNSW;{[CT]|[{M(Oxidation (M))|F}G]}SGGGSN{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}]SW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[SG][HV]{M(Oxidation (M))|F}NSGNSW;[SG]{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}NSGNSW;{[CT]|[{M(Oxidation (M))|F}G]}S[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}GGSGNSW;[YQ][W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}NSGNSW;{[CT]|[{M(Oxidation (M))|F}G]}SNGSN{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}[YQ]P 7.3544;6.7202;6.5214;6.4548;5.8872;5.8009;5.7691;5.6218;5.5346;5.4561 -;-;-;-;-;-;-;-;-;- 1110 1 2.362 39148.1 0.4699999988079071 1009 3113 4120 DOHH2_400M_050219_1,4124 DOHH2_400M_050219_1,4124,RDMPHPFCSSW False False EENRNENSGNSW 21.19337 718.295275866985 520259.9375 4120.0 ENSG00000139218|ENST00000369367|SCAF11;;nc|ENSG00000139218|Q99590-2|SCAF11 6.855138301849365 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4126 21.201 250.0 198970.0 25 0 20845.0 + 38599 TTDSSYGQNY 10 95 568.2304984398522 1134.4464439465044 2 568.2301513552666 MULTI CID FTMS 0 0 0 4125 219499.640625 0.2157195068123127 -7 0.1359272003173828 1 Unmodified _TTDSSYGQNY_ ENSG00000270647|ENST00000605844|TAF15;nc|ENSG00000270647|Q92804-2|TAF15 32.30548876998284 0.2428506522065767 1 NY 2 8 20.261 0.0 0.0 1.786 0.0 0.0 839.3300631865419 0.0 839.3300631865419 0.0 6.133501168412279 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + NY 1.786 + + 232 + 1 2.362 41447.6 1.0 1010 3114 4125 DOHH2_400M_050219_1,4126 DOHH2_400M_050219_1,4126,TTDSSYGQNY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4127 21.203 136.0 343300.0 25 0 37898.0 + 7356 EGANCRQV 8 91 438.7018244213213 875.3890959094425 2 438.7015869021416 MULTI CID FTMS 0 0 0 4125 275535.625 0.2143984784733923 -10 0.1742076873779297 2 Unmodified _EGANCRQV_ REV__ENST00000591278.5_1_19:9266676-9268567:+|nuORF 16.942295170755138 0.6606234159769251 1 {[DA]|[EG]}AGGK 6 -1 50.891 0.0 0.0 5.8135 0.0 0.0 0.0 373.1247957818969 373.1247957818969 37.791681396006 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 {[DA]|[EG]}AGGK 5.8135 - 142 + 1 2.362 40342.1 1.0 1011 3114 4125 DOHH2_400M_050219_1,4127 DOHH2_400M_050219_1,4127,EGANCRQV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4128 21.214 588.0 187490.0 25 0 14748.0 + 5852 DPVRKEVSV 9 130 514.7905027319428 1027.5664525306854 2 514.7906982302666 MULTI CID FTMS 0 0 0 4125 89103.3828125 0.2625215260951884 -7 0.1359272003173828 3 Unmodified _DPVRKEVSV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 37.77132515983256 0.0876909340306915 1 [DP][RK]{I|L}VSVD 9 3 + 37.813 0.0 0.0 3.6798 3.6798 75.165 0.0 0.0 0.0 3.6561995758996417 12.96983721748952 3.6561995758996417 4.771212547196626 0 0.3252574989159953 1.3010299956639813 0.0 0.0 [DP][RK]{I|L}VSVD;[DP][RK]V{I|L}SVD;{[{M(Oxidation (M))|F}H]|[RQ]}[{I|L}V]{I|L}VSVD;{[{M(Oxidation (M))|F}H]|[RQ]}[{I|L}V]V{I|L}SVD 3.6798;3.2155;2.032;1.5677 -;-;-;- 308 1 2.362 85205.9 1.0 1012 3114 4125 DOHH2_400M_050219_1,4128 DOHH2_400M_050219_1,4128,DPVRKEVSV True True DPVRKEVSV 21.213614 514.790698230267 1558362.75 4125.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 4.806583563486735 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4130 21.218 53.0 1139500.0 25 0 209340.0 + 32849 SEGYPGQRY 9 62 528.7407496760819 1055.4669464189635 2 528.7409545779228 MULTI CID FTMS 0 0 0 4129 996942.625 0.6581294432586082 -6 0.1165122985839843 1 Unmodified _SEGYPGQRY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 39.957323273325 0.0756908302845263 1 {[ES]|[DT]|[{I|L}C]}GYP 5 4 32.218 0.0 0.0 3.0525 0.0 0.0 0.0 519.2319429986936 519.2319429986936 18.24031267727719 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}GYP 3.0525 + + 36 + 1 2.362 53169.8 1.0 1013 3115 4129 DOHH2_400M_050219_1,4130 DOHH2_400M_050219_1,4130,SEGYPGQRY True True SEGYPGQRY 21.218412 528.740954577923 6820400.5 4129.0 nc|ENSG00000176974|P34896-2|SHMT1;;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;;ENSG00000176974|ENST00000316694|SHMT1;;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;;nc|ENSG00000176974|P34896-3|SHMT1 6.748821417490642 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4131 21.222 176.0 308800.0 25 0 16459.0 + 2471 AQYEDIAQK 9 97 533.2639390730956 1064.513325212991 2 533.2643310427666 MULTI CID FTMS 0 0 0 4129 232888.4375 0.185480705295731 7 -0.0782489776611328 2 Unmodified _AQYEDIAQK_ ENSG00000167768|ENST00000252244|KRT1 31.26834338654808 0.1333407332142048 1 [QA]YED{I|L}AQK 9 0 + 60.288 0.0 0.0 5.6635 5.6635 83.075 0.0 0.0 0.0 14.59491766415944 6.129129957309459 6.129129957309459 6.129129957309459 0 0.5 0.744727494896694 0.4247425010840047 0.5 + + [QA]YED{I|L}AQK;[QA]YED{I|L}AKQ;[QA]YED{I|L}A[AG]K;[QA]YEG{[QN]|[E{I|L}]|[KN]}QK;[QA]YEG{[QN]|[E{I|L}]|[KN]}KQ;[QA]Y{[VA]|[{I|L}G]}EEQK;[QA]YEG{[QN]|[E{I|L}]|[KN]}[AG]K;[QA]Y{[VA]|[{I|L}G]}EEKQ 5.6635;5.0877;4.7985;3.811;3.2352;3.1435;2.946;2.5678 +;-;-;-;-;-;-;- + 281 + 1 2.362 47487.5 1.0 1014 3115 4129 DOHH2_400M_050219_1,4131 DOHH2_400M_050219_1,4131,AQYEDIAQK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4133 21.229 253.0 287800.0 25 0 24474.0 -1 0 105 534.3117833872244 533.3045069206244 1 534.3119384646416 MULTI CID FTMS 0 0 0 4132 274654.3125 0.1275387634088605 -114 2.337106704711914 1 1 Y 1 -1 11.42 0.0 0.0 2.1414 0.0 0.0 352.23016412452904 0.0 352.23016412452904 0.0 1.2389224185537806 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.1414 - 19 + 1 2.362 61705.5 1.0 1015 3116 4132 DOHH2_400M_050219_1,4133 DOHH2_400M_050219_1,4133, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4134 21.234 252.0 381980.0 25 0 104370.0 + 30488 REEHKLAMAPD 11 52 432.8851685352896 0 432.8849670290947 PEAK CID FTMS 0 0 0 4132 228477.890625 0.5854608524052262 -103 1.9769248962402344 2 Unmodified _REEHKLAMAPD_ REV__ENSG00000011451|ENST00000673675|WIZ;REV__ENST00000595214.2_1_19:15547509-15549737:-|nuORF;REV__nc|ENSG00000011451|O95785|WIZ 2.434785330301024 0.4761840153648598 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.362 80132.4 1.0 1016 3116 4132 DOHH2_400M_050219_1,4134 DOHH2_400M_050219_1,4134,REEHKLAMAPD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4135 21.245 667.0 56253.0 25 0 1907.8 -1 0 68 948.4058956406412 2842.195857522124 3 948.7396118044852 MULTI CID FTMS 0 0 0 4132 140657.546875 0.7608993473501388 -1 0.0082225799560546 3 1 [KQ]EY 4 -1 17.039 0.0 0.0 0.59951 0.0 0.0 0.0 2290.9101268915174 2290.9101268915174 6.2371250542002326 0.0 0.0 0.0 0 0.0 0.0 0.0 0.9247425010840048 [KQ]EY 0.59951 - 111 1 2.362 31264.2 1.0 1017 3116 4132 DOHH2_400M_050219_1,4135 DOHH2_400M_050219_1,4135, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4137 21.256 368.0 195700.0 25 0 22048.0 + 32718 SEAPARQGF 9 90 481.7381097116688 961.4616664901376 2 481.7385131716728 MULTI CID FTMS 0 0 0 4136 142940.953125 0.5784654431208254 -4 0.0868244171142578 1 Unmodified _SEAPARQGF_ ENSG00000164306|ENST00000314970|PRIMPOL;nc|ENSG00000164306|Q96LW4-2|PRIMPOL 39.957323273325 0.0756908302845263 1 {[ES]|[DT]|[{I|L}C]}APPKGNY 9 5 {[ES]|[DT]|[{I|L}C]} + + 33.786 7.6253 3.529 3.514 3.514 51.775 0.0 0.0 0.0 0.0 20.29132820873631 0.0 0.0 0 1.3182503180159344 0.0 0.0 0.7742275032520141 {[ES]|[DT]|[{I|L}C]}APPKGNY 3.514 - 86 + 1 2.375 61071.8 1.0 1018 3117 4136 DOHH2_400M_050219_1,4137 DOHH2_400M_050219_1,4137,SEAPARQGF True True SEAPARQGF 21.255993 481.738513171673 1129555.875 4136.0 ENSG00000164306|ENST00000314970|PRIMPOL;;nc|ENSG00000164306|Q96LW4-2|PRIMPOL 7.158114115397136 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4138 21.26 236.0 356620.0 25 0 28820.0 28152 PPQPPPPPP 9 105 462.2531473853991 922.4917418375982 2 462.2530090212822 MULTI CID FTMS 0 0 0 4136 291250.71875 0.7996635072314028 -3 0.0520610809326171 2 Unmodified _PPQPPPPPP_ ENSG00000077044|ENST00000264057|DGKD;ENSG00000128652|ENST00000683222|HOXD3;ENSG00000131061|ENST00000375200|ZNF341;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000148143|ENST00000277225|ZNF462;ENSG00000165556|ENST00000381020|CDX2;ENSG00000181240|ENST00000321510|SLC25A41;ENSG00000183654|ENST00000332432|MARCHF11;ENSG00000196814|ENST00000361171|MVB12B;ENSG00000198914|ENST00000361360|POU3F3;ENSG00000204612|ENST00000376708|FOXB2;ENSG00000242265|ENST00000612748|PEG10;ENST00000372441.1_1_6:43477335-43478064:-|nuORF;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;ENST00000519758.5_1_X:47078159-47081683:+|nuORF;ENST00000522234.5_1_X:47078210-47085639:+|nuORF;nc|ENSG00000131061|Q9BYN7-2|ZNF341;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000148143|Q96JM2-3|ZNF462;nc|ENSG00000168066|Q15637-5|SF1;nc|ENSG00000181240|Q8N5S1-2|SLC25A41;nc|ENSG00000196814|Q9H7P6-2|MVB12B;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10;nc|ENSG00000288658|A0A7I2V3R4|RNF228;REV__ENSG00000100207|ENST00000677622|TCF20;REV__ENSG00000117523|ENST00000647382|PRRC2C;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000165556|ENST00000381020|CDX2;REV__ENSG00000187961|ENST00000338591|KLHL17;REV__nc|ENSG00000100207|Q9UGU0-2|TCF20;REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-3|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-4|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-5|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-6|PRRC2C;REV__nc|ENSG00000117523|Q9Y520|PRRC2C;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341 24.67388899826682 0.2172451872415813 1 DP 2 8 20.969 0.0 0.0 2.2731 0.0 0.0 0.0 707.3858100061811 707.3858100061811 10.880456295278409 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DP 2.2731 - 76 + 1 2.375 68856.9 1.0 1019 3117 4136 DOHH2_400M_050219_1,4138 DOHH2_400M_050219_1,4138,PPQPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4141 21.281 800.0 135000.0 25 0 19333.0 + 18050 KTDESLTKY 9 139 542.7794901655421 1083.5444273978842 2 542.7794067263603 MULTI CID FTMS 0 0 0 4140 81971.2890625 0.576011510650448 -3 0.0426044464111328 1 Unmodified _KTDESLTKY_ ENSG00000100888|ENST00000646647|CHD8;ENST00000555301.1_1_14:21862382-21863168:-|nuORF;nc|ENSG00000100888|Q9HCK8-2|CHD8 68.75988807550267 0.0215783377819135 1 KTDE{[TV]|[{I|L}S]}TKY 9 0 + 71.34 0.0 0.0 6.5839 6.5839 87.951 0.0 0.0 0.0 57.14387173178174 5.756434167410731 5.756434167410731 8.50833760139686 0 2.9802046884880937 0.0 0.0 0.4247425010840047 + + KTDE{[TV]|[{I|L}S]}TKY;K[QA]TMNTKY;KT[QA]MNTKY;[KT]DE{[TV]|[{I|L}S]}TKY;KTDE{[TV]|[{I|L}S]}TYK;K[QA]TMGGTKY;KT[QA]MGGTKY;[{I|L}T]{NN|[MP]|[D{I|L}]|[EV]}CKTKY;K[QA]TMNTYK;KT[QA]MNTYK 6.5839;5.7987;5.7463;5.5785;5.4521;4.9489;4.8964;4.7617;4.6669;4.6144 +;-;-;+;-;-;-;-;-;- + 1236 + 1 2.375 85657.2 0.5799999833106995 1020 3119 4140 DOHH2_400M_050219_1,4141 DOHH2_400M_050219_1,4141,KTDESLTKY True True KTDESLTKY 21.280842 542.77940672636 651461.625 4140.0 nc|ENSG00000100888|Q9HCK8-2|CHD8;;ENST00000555301.1_1_14:21862382-21863168:-|nuORF;;ENSG00000100888|ENST00000646647|CHD8 5.448232491811116 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4144 21.292 236.0 253430.0 25 0 20518.0 + 7262 EESRGNNQW 9 99 560.2439351195967 1118.4733173059933 2 560.2440673708916 MULTI CID FTMS 0 0 0 4143 275108.28125 0.581632996213672 7 -0.1494979858398437 1 Unmodified _EESRGNNQW_ ENSG00000099860|ENST00000215631|GADD45B;ENST00000592937.1_1_19:2477233-2477596:+|nuORF 52.268347100219714 0.0353964759249114 1 {I|L}NGAW 5 7 37.929 0.0 0.0 3.3912 0.0 0.0 559.1946888654312 0.0 559.1946888654312 0.0 16.203149499061734 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.6989700043360187 {I|L}NGAW 3.3912 - 560 1 2.375 47877.4 1.0 1021 3121 4143 DOHH2_400M_050219_1,4144 DOHH2_400M_050219_1,4144,EESRGNNQW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4147 21.301 100.0 492950.0 25 0 51783.0 -1 CTECHPTCR 9 81 582.2251771418183 1162.4358013504366 2 582.2255737185478 MULTI CID FTMS 0 0 0 4146 581688.0 0.766384827454455 5 -0.138580322265625 1 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))TECHPTC(Carbamidomethyl (C))R_ ENSG00000138759|ENST00000512123|FRAS1;nc|ENSG00000138759|Q86XX4-5|FRAS1;nc|ENSG00000138759|Q86XX4-6|FRAS1;nc|ENSG00000138759|Q86XX4|FRAS1 4.3292370932331545 0.7635526921153418 1 [MT]A 3 -1 24.437 0.0 0.0 2.1022 0.0 0.0 0.0 856.2866979170959 856.2866979170959 7.447274948966935 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MT]A 2.1022 - 232 1 2.375 40857.1 1.0 1022 3123 4146 DOHH2_400M_050219_1,4147 DOHH2_400M_050219_1,4147,CTECHPTCR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4148 21.314 800.0 51754.0 25 0 2589.3 + + -1 ASNDYTQQATQS 12 91 678.2895058762718 1354.5644588193436 2 678.2900878787041 MULTI CID FTMS 0 0 0 4146 59141.85546875 0.6954076400284844 1 -0.0392055511474609 2 2 Carbamidomethyl (C) _YNLC(Carbamidomethyl (C))C(Carbamidomethyl (C))NPVTSQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 8.155526934196011 0.8366696279279818 1 [AG]TQA 5 -1 23.081 0.0 0.0 1.704 0.0 0.0 0.0 923.339915932878 923.339915932878 4.3970370285054905 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2887254899964357 0.2614393726401688 [AG]TQA 1.704 - 550 1 2.375 36868.3 0.5199999809265137 1023 3123 4146 DOHH2_400M_050219_1,4148 DOHH2_400M_050219_1,4148,YNLCCNPVTSQ False False ASNDYTQQATQS 21.314442 678.290087878704 441327.21875 4146.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 3.749602794647217 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4149 21.318 162.0 423520.0 25 0 42588.0 + 18164 KTSISLNRD 9 90 517.2856139466651 0 517.2869750857353 PEAK CID FTMS 0 0 0 4146 239324.6875 0.1758411035774885 -46 0.8426113128662109 3 Unmodified _KTSISLNRD_ REV__ENSG00000196678|ENST00000357967|ERI2;REV__ENST00000568805.5_1_16:20809048-20811281:-|nuORF;REV__nc|ENSG00000196678|A8K979-2|ERI2 9.38312468134398 0.3193474221348066 1 T 1 -1 6.9897 0.0 0.0 0.67693 0.0 0.0 292.1376208603238 636.3443087213499 928.4819295816736 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.67693 + + 2 + 1 2.375 57011.4 1.0 1024 3123 4146 DOHH2_400M_050219_1,4149 DOHH2_400M_050219_1,4149,KTSISLNRD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4150 21.321 185.0 405370.0 25 0 80080.0 -1 0 108 367.1967897569252 366.1895132903252 1 367.1963683962822 MULTI CID FTMS 0 0 0 4146 90738.78125 0.0958746103539286 23 -0.3830013275146484 4 1 [YG]K 3 -1 [YG] + + 11.779 -1.6723 -0.75983 3.2167 3.2167 50.976 0.0 0.0 0.0 0.0 0.941876774005248 0.0 0.0 0 0.0 0.0 0.0 0.0941876774005248 [YG]K 3.2167 - 16 + 1 2.375 64440.2 1.0 1025 3123 4146 DOHH2_400M_050219_1,4150 DOHH2_400M_050219_1,4150, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4151 21.335 800.0 183820.0 25 0 26025.0 26957 PECERRPSICL 11 103 434.8822017041066 0 434.8822814822197 PEAK CID FTMS 0 0 0 4146 94637.2578125 0.6912713190946386 169 -5.339639663696289 5 Unmodified _PECERRPSICL_ ENST00000522621.1_2_8:62044343-62212351:+|nuORF 6.2057823575117 0.47618401536486 1 TR 2 10 11.211 0.0 0.0 1.292 0.0 0.0 96.32640798507153 511.2557467096312 607.5821546947027 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 TR 1.292 - 10 + 1 2.375 118487.0 0.449999988079071 1026 3123 4146 DOHH2_400M_050219_1,4151 DOHH2_400M_050219_1,4151,PECERRPSICL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4153 21.353 800.0 96002.0 25 0 10307.0 + 35033 SQQSQDDISY 10 109 585.748748121251 1169.4829433093018 2 585.7494994997978 MULTI CID FTMS 0 0 0 4152 43750.54296875 0.1317371420264026 12 -0.2090129852294922 1 Unmodified _SQQSQDDISY_ REV__ENSG00000145817|ENST00000274496|YIPF5;REV__ENST00000508754.1_1_5:143543641-143549519:-|nuORF;REV__ENST00000522203.5_1_5:143545115-143549519:-|nuORF;REV__nc|ENSG00000145817|Q969M3-3|YIPF5 16.149105407346934 0.5765757077271437 1 {[TV]|[{I|L}S]}DD 4 -1 22.14 0.0 0.0 1.8931 0.0 0.0 0.0 736.2812580888518 736.2812580888518 4.181212380090216 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}DD 1.8931 - 168 1 2.384 61785.7 0.5 1027 3124 4152 DOHH2_400M_050219_1,4153 DOHH2_400M_050219_1,4153,SQQSQDDISY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4154 21.36 381.0 280260.0 25 0 46861.0 + 45286 YSDLRKESM 9 129 376.8495957729659 1127.526957919098 3 376.8497192263603 MULTI CID FTMS 0 0 0 4152 168453.3125 0.7887916641180893 -2 0.0431480407714843 2 Unmodified _YSDLRKESM_ ENSG00000073111|ENST00000265056|MCM2;ENST00000468414.1_1_3:127336783-127340613:+|nuORF;ENST00000474964.5_1_3:127323572-127340613:+|nuORF 14.218169984304629 0.4518140821082705 1 YSDM 4 5 46.899 0.0 0.0 4.1595 0.0 0.0 0.0 628.3427218072874 628.3427218072874 25.669015600442577 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 YSDM 4.1595 - 269 + 1 2.384 86492.1 1.0 1028 3124 4152 DOHH2_400M_050219_1,4154 DOHH2_400M_050219_1,4154,YSDLRKESM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4155 21.369 518.0 150910.0 25 0 14615.0 + 45287 YSDLRKESM 9 106 564.7705158045267 1127.5264786758532 2 564.7712280154228 MULTI CID FTMS 0 0 0 4152 102443.3515625 0.9118006352478708 -1 0.0392055511474609 3 Unmodified _YSDLRKESM_ ENSG00000073111|ENST00000265056|MCM2;ENST00000468414.1_1_3:127336783-127340613:+|nuORF;ENST00000474964.5_1_3:127323572-127340613:+|nuORF 38.558800761779466 0.0833680625411826 1 YSD{I|L}RKESM 9 0 + 88.414 0.0 0.0 7.8414 7.8414 92.402 0.0 0.0 0.0 58.672744868324486 13.46787486224656 13.46787486224656 9.208187539523747 0 0.805462187404089 2.0 0.3807196863200844 0.0 + + YSD{I|L}RKESM;YSD{I|L}[VG]KESM;YSD{I|L}RKDTM;YSD{I|L}[VG]KDTM;M{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}RKESM;YSD{I|L}R[RD]{[CT]|[{M(Oxidation (M))|F}G]};M{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}RKDTM;M{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[VG]KESM;YSD{I|L}[VG][RD]{[CT]|[{M(Oxidation (M))|F}G]};M{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[VG]KDTM 7.8414;7.0248;6.9709;6.1542;4.067;3.9821;3.9776;3.2503;3.1655;3.1609 +;-;-;-;-;-;-;-;-;- + 290 + 1 2.384 64341.7 1.0 1029 3124 4152 DOHH2_400M_050219_1,4155 DOHH2_400M_050219_1,4155,YSDLRKESM True True YSDLRKESM 21.36869 564.771228015423 1271506.96875 4152.0 ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2;;ENST00000468414.1_1_3:127336783-127340613:+|nuORF 9.126994768778482 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4157 21.375 209.0 258280.0 25 0 30611.0 + 19065 LDQIFIHV 8 84 492.7773078965894 983.5400628599788 2 492.7784301638603 MULTI CID FTMS 0 0 0 4156 120799.765625 0.5287569605005911 -6 0.1042385101318359 1 Unmodified _LDQIFIHV_ REV__ENSG00000142303|ENST00000597188|ADAMTS10;REV__nc|ENSG00000142303|Q9H324-2|ADAMTS10;REV__nc|ENSG00000142303|Q9H324|ADAMTS10 24.67388899826682 0.525179942228231 1 {I|L}DQ{I|L} 4 -1 54.68 0.0 0.0 5.5596 0.0 0.0 0.0 511.2650240533812 511.2650240533812 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.5 {I|L}DQ{I|L} 5.5596 + + 42 + 1 2.384 47930.6 1.0 1030 3125 4156 DOHH2_400M_050219_1,4157 DOHH2_400M_050219_1,4157,LDQIFIHV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4158 21.389 800.0 46507.0 25 0 2268.0 -1 DCCQHDRMEAP 11 86 709.7639802580885 1417.513407582977 2 709.7652465701103 MULTI CID FTMS 0 0 0 4156 105446.5 0.8650604808072115 -3 0.0768165588378906 2 2 Carbamidomethyl (C) _DC(Carbamidomethyl (C))C(Carbamidomethyl (C))QHDRMEAP_ ENST00000360814.8_1_12:104387270-104390561:-|nuORF;ENST00000552572.1_1_12:104388043-104390561:-|nuORF 5.296884461304476 0.8501568894076437 1 {[TV]|[{I|L}S]}D 3 -1 36.796 0.0 0.0 2.5958 0.0 0.0 0.0 1099.3480382804958 1099.3480382804958 20.597718523607966 0.0 0.0 0.0 0 0.5 2.0 0.7614393726401688 0.0 {[TV]|[{I|L}S]}D 2.5958 - 57 1 2.384 36169.3 0.4600000083446502 1031 3125 4156 DOHH2_400M_050219_1,4158 DOHH2_400M_050219_1,4158,DCCQHDRMEAP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4159 21.391 65.0 748830.0 25 0 44575.0 5094 DHNDGLGNAF 10 80 530.2277870282904 1058.4410211233808 2 530.2281371951103 MULTI CID FTMS 0 0 0 4156 711909.5625 0.7447002991601575 -5 0.0878448486328125 3 Unmodified _DHNDGLGNAF_ ENSG00000271447|ENST00000605424|MMP28 16.149105407346934 0.5765757077271437 1 [HD]EAQQNA{M(Oxidation (M))|F} 9 5 + 70.411 0.0 0.0 6.6523 6.6523 89.932 0.0 0.0 0.0 7.147642715192504 45.48963451112506 7.147642715192504 9.208187539523747 0 0.8494850021680094 0.0 0.3054621874040891 0.4247425010840047 [HD]EAQQNA{M(Oxidation (M))|F};[HD]EA[AG]QNA{M(Oxidation (M))|F};[HD]EAQ[AG]NA{M(Oxidation (M))|F};[HD]EAQQGGA{M(Oxidation (M))|F};[HD]EA[AG][AG]NA{M(Oxidation (M))|F};[HD]EA[AG]QGGA{M(Oxidation (M))|F};[HD]EAQ[AG]GGA{M(Oxidation (M))|F};{[WT]|[RM]}{M(Oxidation (M))|F}HHNA{M(Oxidation (M))|F};{[WT]|[RM]}{M(Oxidation (M))|F}HHGGA{M(Oxidation (M))|F} 6.6523;5.7824;5.7824;5.7824;4.9165;4.9165;4.9165;3.0786;2.2035 -;-;-;-;-;-;-;-;- 139 1 2.384 43678.6 1.0 1032 3125 4156 DOHH2_400M_050219_1,4159 DOHH2_400M_050219_1,4159,DHNDGLGNAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4160 21.393 139.0 751850.0 25 0 42099.0 + 593 AEITKEQRL 9 108 363.2087776409245 1086.6045035229731 3 363.2082397341728 MULTI CID FTMS 0 0 0 4156 260096.34375 0.8220116992539748 -1 0.0336685180664062 4 Unmodified _AEITKEQRL_ ENSG00000186001|ENST00000425562|LRCH3;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3 19.361941925380144 0.3125782356748823 1 [{I|L}T]M[KA]KR{I|L} 8 5 34.966 0.0 0.0 3.2179 0.0 0.0 0.0 142.00442441823432 142.00442441823432 10.426189163465018 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.2742275032520141 0.3807196863200844 [{I|L}T]M[KA]KR{I|L} 3.2179 - 534 1 2.384 88188.4 1.0 1033 3125 4156 DOHH2_400M_050219_1,4160 DOHH2_400M_050219_1,4160,AEITKEQRL False True AEITKEQRL 21.393404 363.208239734173 1424138.375 4156.0 nc|ENSG00000186001|Q96II8-4|LRCH3;;nc|ENSG00000186001|Q96II8-2|LRCH3;;ENSG00000186001|ENST00000425562|LRCH3;;nc|ENSG00000186001|Q96II8-3|LRCH3 4.808765888214111 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4161 21.407 800.0 215520.0 25 0 18899.0 -1 0 72 624.7864469209092 2495.1166818172364 4 625.0368530154228 MULTI CID FTMS 0 0 0 4156 81721.9375 0.0266918110390656 -22 0.3547420501708984 5 1 DDRENVP 7 -1 40.438 0.0 0.0 1.6207 0.0 0.0 1651.7515812528916 0.0 1651.7515812528916 0.0 24.953132367022164 0.0 0.0 0 1.424742501084005 0.0 0.3494850021680094 0.0 DDRENVP 1.6207 - 209 + 1 2.384 130316.5 0.4699999988079071 1034 3125 4156 DOHH2_400M_050219_1,4161 DOHH2_400M_050219_1,4161, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4163 21.414 120.0 522830.0 25 0 93660.0 + 34644 SPPPPPPPP 9 90 441.7399142304098 881.4652755276196 2 441.7397033572197 MULTI CID FTMS 0 0 0 4162 483711.90625 0.8423365229636952 8 -0.1287269592285156 1 Unmodified _SPPPPPPPP_ ENSG00000103479|ENST00000262133|RBL2;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENSG00000099999|ENST00000382363|RNF215;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000136754|Q8IZP0-8|ABI1;ENSG00000100312|ENST00000216139|ACR;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;ENSG00000139800|ENST00000267294|ZIC5;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000164944|Q69YN4-4|VIRMA;ENSG00000109920|ENST00000263773|FNBP4;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000260428|ENST00000567180|SCX;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000109920|Q8N3X1-2|FNBP4;ENSG00000274209|ENST00000620264|ANTXRL;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000136754|ENST00000376140|ABI1;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;ENSG00000107816|ENST00000454422|LZTS2;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;ENSG00000184863|ENST00000401878|RBM33;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217;nc|ENSG00000136754|Q8IZP0-12|ABI1 93.88341677533236 0.0134066622201488 1 [PS]PPPP[YK] 8 3 + 69.288 0.0 0.0 7.8605 7.8605 96.454 0.0 0.0 0.0 20.66946789630613 53.88190082242268 20.66946789630613 24.25968732272281 0 1.25 2.0 1.4604093769761874 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[PS][YK]P[YK];[PS]P[YK][YK];{[NV]|[RG]}[YV]P[YK];{[HG]|PP}S[YK][YK] 7.8605;5.1083;4.9962;3.7184;1.5573;0.96616 -;-;-;-;-;- 127 1 2.391 54257.4 1.0 1035 3126 4162 DOHH2_400M_050219_1,4163 DOHH2_400M_050219_1,4163,SPPPPPPPP False False SPPPPPPPP 21.413585 441.73970335722 15920307.0 4162.0 ENSG00000103479|ENST00000262133|RBL2;;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;;ENSG00000099999|ENST00000382363|RNF215;;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;;nc|ENSG00000136754|Q8IZP0-8|ABI1;;ENSG00000100312|ENST00000216139|ACR;;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;;nc|ENSG00000136754|Q8IZP0-7|ABI1;;nc|ENSG00000136754|Q8IZP0-10|ABI1;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000136754|Q8IZP0-11|ABI1;;nc|ENSG00000136754|Q8IZP0-3|ABI1;;ENSG00000139800|ENST00000267294|ZIC5;;nc|ENSG00000136754|Q8IZP0-5|ABI1;;nc|ENSG00000164944|Q69YN4-4|VIRMA;;ENSG00000109920|ENST00000263773|FNBP4;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000260428|ENST00000567180|SCX;;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;;nc|ENSG00000109920|Q8N3X1-2|FNBP4;;ENSG00000274209|ENST00000620264|ANTXRL;;nc|ENSG00000136754|Q8IZP0-4|ABI1;;nc|ENSG00000136754|Q8IZP0-6|ABI1;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA;;ENSG00000136754|ENST00000376140|ABI1;;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;;ENSG00000107816|ENST00000454422|LZTS2;;nc|ENSG00000136754|Q8IZP0-2|ABI1;;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;;ENSG00000184863|ENST00000401878|RBM33;;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;;ENSG00000126461|ENST00000360565|SCAF1;;ENSG00000127666|ENST00000248244|TICAM1;;nc|ENSG00000136754|Q8IZP0|ABI1;;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;;ENSG00000120549|ENST00000376454|KIAA1217;;nc|ENSG00000136754|Q8IZP0-12|ABI1 5.141778945922852 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4164 21.416 114.0 539410.0 25 0 153380.0 + 28549 PTQRSAPL 8 77 435.2458069892349 868.4770610452697 2 435.2456542849541 MULTI CID FTMS 0 0 0 4162 499156.75 0.1921698070531891 -14 0.252695083618164 2 Unmodified _PTQRSAPL_ REV__ENST00000466047.5_1_10:121609046-121633060:-|nuORF 25.399314129420983 0.5099049743284904 1 PTQ 3 -1 48.06 0.0 0.0 5.5338 0.0 0.0 0.0 539.2964571588499 539.2964571588499 34.56485629844558 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 PTQ 5.5338 + + 30 + 1 2.391 54877.3 1.0 1036 3126 4162 DOHH2_400M_050219_1,4164 DOHH2_400M_050219_1,4164,PTQRSAPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4165 21.422 333.0 211090.0 25 0 12730.0 41262 VPGSLLAARDT 11 118 550.3069350889892 0 550.3066894412041 PEAK CID FTMS 0 0 0 4162 214266.0625 0.8570443237194735 30 -0.5790195465087891 3 Unmodified _VPGSLLAARDT_ ENSG00000094661|ENST00000641398|OR1I1 4.5288652416199255 0.4761840153648598 1 D 1 10 3.0989 0.0 0.0 0.28208 0.0 0.0 657.3769489359878 323.1702669733032 980.547215909291 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.28208 + + 4 + 1 2.391 58397.4 1.0 1037 3126 4162 DOHH2_400M_050219_1,4165 DOHH2_400M_050219_1,4165,VPGSLLAARDT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4167 21.428 172.0 279620.0 25 0 20549.0 + 18070 KTDSTGTHSLY 11 80 605.2911504702217 1208.5677480072434 2 605.2912475466728 MULTI CID FTMS 0 0 0 4166 372685.15625 0.4802031135847359 6 -0.0982475280761718 1 Unmodified _KTDSTGTHSLY_ ENSG00000105738|ENST00000222345|SIPA1L3;ENSG00000116991|ENST00000674635|SIPA1L2;ENSG00000197555|ENST00000381232|SIPA1L1;ENSG00000213445|ENST00000534313|SIPA1;nc|ENSG00000197555|O43166-3|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1 47.7319792270244 0.130190323903946 1 TD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SHS{I|L}Y 9 5 37.718 0.0 0.0 3.1209 0.0 0.0 128.09733767252243 0.0 128.09733767252243 0.0 16.827665712010223 0.0 0.0 0 2.742992819099939 0.0 0.4247425010840047 0.0 TD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SHS{I|L}Y 3.1209 - 169 + 1 2.391 40067.0 1.0 1038 3127 4166 DOHH2_400M_050219_1,4167 DOHH2_400M_050219_1,4167,KTDSTGTHSLY False True KTDSTGTHSLY 21.427935 605.291247546673 7720747.5 4166.0 nc|ENSG00000197555|O43166-3|SIPA1L1;;ENSG00000105738|ENST00000222345|SIPA1L3;;ENSG00000116991|ENST00000674635|SIPA1L2;;nc|ENSG00000197555|O43166|SIPA1L1;;ENSG00000213445|ENST00000534313|SIPA1;;ENSG00000197555|ENST00000381232|SIPA1L1 7.57874075571696 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4168 21.434 359.0 312980.0 25 0 41140.0 + 22736 LQKFARRFLLF 11 102 360.4732597777517 1437.8639332446066 4 360.4731628298759 MULTI CID FTMS 0 0 0 4166 108881.5703125 0.6525143978988955 -5 0.1301517486572265 2 Unmodified _LQKFARRFLLF_ REV__ENSG00000162892|ENST00000294984|IL24;REV__ENST00000367095.7_1_1:207071131-207076401:+|nuORF;REV__ENST00000491169.1_1_1:207070885-207076401:+|nuORF;REV__nc|ENSG00000162892|Q13007-2|IL24;REV__nc|ENSG00000162892|Q13007-3|IL24 2.6312355333042263 0.8627335947654684 1 {I|L}AG 3 -1 20.802 0.0 0.0 1.4467 0.0 0.0 0.0 1193.6996355531794 1193.6996355531794 7.307131330965717 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AG 1.4467 - 40 + 1 2.391 93907.0 1.0 1039 3127 4166 DOHH2_400M_050219_1,4168 DOHH2_400M_050219_1,4168,LQKFARRFLLF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4173 21.454 280.0 197820.0 25 0 22654.0 + 38600 TTDSSYGQNY 10 94 568.2304984398522 1134.4464439465044 2 568.2308227419853 MULTI CID FTMS 0 0 0 4172 377007.25 0.3705145840015714 10 -0.1425113677978515 1 Unmodified _TTDSSYGQNY_ ENSG00000270647|ENST00000605844|TAF15;nc|ENSG00000270647|Q92804-2|TAF15 65.23502041540118 0.0228537820337083 1 NY 2 8 27.206 0.0 0.0 2.3982 0.0 0.0 839.3299411162294 0.0 839.3299411162294 0.0 13.506429755557113 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 + NY 2.3982 + + 369 + 1 2.391 48767.5 1.0 1040 3131 4172 DOHH2_400M_050219_1,4173 DOHH2_400M_050219_1,4173,TTDSSYGQNY True True TTDSSYGQNY 21.454248 568.230822741985 10062498.0 4172.0 ENSG00000270647|ENST00000605844|TAF15;;nc|ENSG00000270647|Q92804-2|TAF15 6.84088675181071 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4174 21.46 301.0 380900.0 25 0 40348.0 -1 0 64 500.0306281814829 2495.1167585744147 5 500.2312499880791 MULTI CID FTMS 0 0 0 4172 193613.53125 0.1013455846399934 -15 0.2246894836425781 2 1 D 1 -1 10.485 0.0 0.0 0.4202 0.0 0.0 1651.750981412131 725.3156325418598 2377.066613953991 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 D 0.4202 - 16 + 1 2.391 93404.3 1.0 1041 3131 4172 DOHH2_400M_050219_1,4174 DOHH2_400M_050219_1,4174, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4175 21.474 800.0 107040.0 25 0 4105.8 + -1 TMDNPTTTQY 10 145 594.2563856147403 1186.4982182962806 2 594.2476074099541 MULTI CID FTMS 0 0 0 4172 100870.984375 0.2129003979575522 -14 0.2011070251464843 3 Carbamidomethyl (C) _QGYSC(Carbamidomethyl (C))IWHH_ ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF 7.289230182591677 0.6602208344931196 1 QY 2 -1 16.559 0.0 0.0 1.3956 0.0 0.0 877.3663651242088 0.0 877.3663651242088 0.0 0.1240888142041711 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 QY 1.3956 - 677 + 1 2.391 66093.9 0.5299999713897705 1042 3131 4172 DOHH2_400M_050219_1,4175 DOHH2_400M_050219_1,4175,QGYSCIWHH False False TMDNPTTTQY 21.473571 594.247607409954 781253.625 4172.0 ENSG00000125971|ENST00000357156|DYNLRB1;;ENST00000480759.1_1_20:33117938-33128425:+|nuORF 6.827682654062907 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4176 21.487 800.0 100220.0 25 0 9675.3 -1 0 44 832.7131149437287 2495.117515431386 3 833.3831054568291 MULTI CID FTMS 0 0 0 4172 71940.3828125 0.1502069373249803 -16 0.2329120635986328 4 1 D 1 -1 11.99 0.0 0.0 0.48053 0.0 0.0 1651.7525056321122 725.3190401666624 2377.0715457987744 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 D 0.48053 - 2 + 1 2.391 64026.8 0.4000000059604645 1043 3131 4172 DOHH2_400M_050219_1,4176 DOHH2_400M_050219_1,4176, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4178 21.492 106.0 405560.0 25 0 63129.0 + 7357 EGANCRQV 8 70 438.7018244213213 875.3890959094425 2 438.7015869021416 MULTI CID FTMS 0 0 0 4177 375643.40625 0.2922938721574111 8 -0.0805015563964843 1 Unmodified _EGANCRQV_ REV__ENST00000591278.5_1_19:9266676-9268567:+|nuORF 16.942295170755138 0.6606234159769251 1 {[DA]|[EG]}AGG 5 -1 49.208 0.0 0.0 5.6213 0.0 0.0 0.0 501.2208651178344 501.2208651178344 39.11954370472159 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}AGG 5.6213 - 70 + 1 2.391 37106.7 1.0 1044 3132 4177 DOHH2_400M_050219_1,4178 DOHH2_400M_050219_1,4178,EGANCRQV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4179 21.506 800.0 212610.0 25 0 24203.0 -1 LKKLCRPLPWK 11 103 480.2959817533799 1437.8661158603395 3 480.6306030154228 MULTI CID FTMS 0 0 0 4177 79919.015625 0.8628166852956269 -7 0.1187248229980468 2 Carbamidomethyl (C) _LKKLC(Carbamidomethyl (C))RPLPWK_ ENSG00000141219|ENST00000535032|C17orf80;nc|ENSG00000141219|Q9BSJ5-2|MTNAP1 1.3296431237094175 0.8688745925763601 1 NY 2 -1 12.875 0.0 0.0 0.89541 0.0 0.0 1142.7492773367053 0.0 1142.7492773367053 0.0 1.76554474077804 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 NY 0.89541 - 167 + 1 2.391 137255.6 0.4300000071525574 1045 3132 4177 DOHH2_400M_050219_1,4179 DOHH2_400M_050219_1,4179,LKKLCRPLPWK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4180 21.52 800.0 97383.0 25 0 35093.0 39814 VETQGGEKNF 10 89 554.7667860874072 1107.5190192416144 2 555.2623779177666 MULTI CID FTMS 0 0 0 4177 87143.5546875 0.0675464474306471 -24 0.417703628540039 3 Unmodified _VETQGGEKNF_ chr1:32627544-32633951|15|10.93|0.17|6.0|-|2|ZBTB8OS,ZBTB8OS|1 10.073929032068715 0.6785112666868882 1 {NN|[MP]|[D{I|L}]|[EV]}[KG]D 5 6 15.458 0.0 0.0 1.3957 0.0 0.0 0.0 576.2393310914769 576.2393310914769 0.0784749426325941 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KG]D 1.3957 - 49 1 2.391 68106.0 0.4900000095367431 1046 3132 4177 DOHH2_400M_050219_1,4180 DOHH2_400M_050219_1,4180,VETQGGEKNF False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 4182 21.531 489.0 230870.0 25 0 18409.0 + 28143 KYQPPPPP 8 114 462.2531473853991 922.4917418375982 2 462.2519714236259 MULTI CID FTMS 0 0 0 4181 175102.765625 0.4807654802932767 13 -0.1585445404052734 1 Unmodified _PPPQPPPPP_ ENSG00000131149|ENST00000253458|GSE1;nc|ENSG00000131149|Q14687-3|GSE1;nc|ENSG00000131149|Q14687-2|GSE1 30.22481116460888 0.1466181017706357 1 [YK]QPPYK 7 6 + 32.307 0.0 0.0 3.5022 3.5022 75.037 0.0 0.0 0.0 9.348491271575412 5.670301873733155 5.670301873733155 5.2287874528033775 0 0.9561510421514924 0.958607314841775 0.0 0.2614393726401688 [YK]QPPYK;[YK]PQPYK;[YK][AG]PPYK;{[HG]|PP}PQPPYK;[YK]P[AG]PYK;{[HG]|PP}PPQPYK;{[HG]|PP}P[AG]PPYK;{[HG]|PP}PP[AG]PYK 3.5022;2.9354;2.4907;1.9503;1.9239;1.3835;0.66288;0.37948 -;-;-;-;-;-;-;- 133 1 2.391 89179.9 1.0 1047 3133 4181 DOHH2_400M_050219_1,4182 DOHH2_400M_050219_1,4182,PPPQPPPPP False False KYQPPPPP 21.531443 462.251971423626 24752161.5 4181.0 ENSG00000131149|ENST00000253458|GSE1;;nc|ENSG00000131149|Q14687-3|GSE1;;nc|ENSG00000131149|Q14687-2|GSE1 1.8205251892407732 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4183 21.536 241.0 235030.0 25 0 34025.0 38704 TTRWKMEVC 9 87 577.2786317595676 1152.542710585935 2 578.2846557497978 MULTI CID FTMS 0 0 0 4181 191845.5 0.4849939623187066 -13 0.2394275665283203 2 Unmodified _TTRWKMEVC_ ENST00000583137.1_1_18:9708365-9723638:+|nuORF 7.910154910731844 0.6385446671287552 1 {M(Oxidation (M))|F}[PS] 3 8 12.492 0.0 0.0 1.0838 0.0 0.0 803.4117772043763 0.0 803.4117772043763 0.0 -0.2726129769208878 -0.2726129769208878 0.0 0 0.0 0.0 0.6549471895720984 0.0 {M(Oxidation (M))|F}[PS] 1.0838 - 63 + 1 2.391 47912.4 1.0 1048 3133 4181 DOHH2_400M_050219_1,4183 DOHH2_400M_050219_1,4183,TTRWKMEVC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4187 21.549 74.0 965540.0 25 0 101280.0 + 11069 GEASRLAHY 9 86 502.2512095079784 1002.4878660827568 2 502.2511779665947 MULTI CID FTMS 0 0 0 4186 611033.25 0.0797707180109738 -11 0.1753444671630859 1 Unmodified _GEASRLAHY_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814728-149815097:+|nuORF;ENST00000465850.1_1_3:113822098-113822344:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000220323|Q6DRA6|H2BC19P;nc|ENSG00000261716|Q6DN03|H2BC20P 40.23920728925047 0.0741434193262949 1 {[DA]|[EG]}[WK]{I|L}AHY 8 3 + 53.836 0.0 0.0 5.3702 5.3702 83.248 0.0 0.0 0.0 7.474250108400469 14.904630595263413 7.474250108400469 7.474250108400469 0 1.524227503252014 1.5228787452803376 0.0 0.0 {[DA]|[EG]}[WK]{I|L}AHY;{[WN]|[YH]}{[TV]|[{I|L}S]}{I|L}AHY;Y[EP]{I|L}[YR]Y;{[SA]|[TG]}[H{I|L}][Y{I|L}]HY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[VA]|[{I|L}G]}[VS]AHY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}[NS]HY;[HA]{[TV]|[{I|L}S]}[Y{I|L}]HY;{[SA]|[TG]}[H{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}WY;[HA]{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}WY 5.3702;4.6247;2.3872;2.3064;2.3051;1.856;1.6079;1.1104;0.41195 -;-;-;-;-;-;-;-;- 180 1 2.391 58576.8 1.0 1049 3136 4186 DOHH2_400M_050219_1,4187 DOHH2_400M_050219_1,4187,GEASRLAHY True True GEASRLAHY 21.54882 502.251177966595 73484288.0 4186.0 ENSG00000277224|ENST00000356530|H2BC7;;ENSG00000274641|ENST00000616182|H2BC17;;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;;ENST00000465850.1_1_3:113822098-113822344:-|nuORF;;ENSG00000273802|ENST00000541790|H2BC8;;ENSG00000274290|ENST00000614097|H2BC6;;nc|ENSG00000203814|Q5QNW6-2|H2BC18;;ENSG00000203814|ENST00000369167|H2BC18;;ENSG00000233822|ENST00000612898|H2BC15;;ENSG00000276410|ENST00000615966|H2BC3;;ENSG00000124635|ENST00000339812|H2BC11;;nc|ENSG00000220323|Q6DRA6|H2BC19P;;ENSG00000275713|ENST00000619466|H2BC9;;nc|ENSG00000261716|Q6DN03|H2BC20P;;ENST00000369385.5_1_1:149814728-149815097:+|nuORF;;ENSG00000158373|ENST00000377777|H2BC5;;ENSG00000273703|ENST00000621112|H2BC14;;ENSG00000278588|ENST00000377733|H2BC10;;ENSG00000180596|ENST00000396984|H2BC4;;ENSG00000197903|ENST00000356950|H2BC12;;ENSG00000184678|ENST00000369155|H2BC21 5.834230105082194 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4191 21.562 159.0 408950.0 25 0 87980.0 + 5342 GEVGKTTGI 9 71 430.8882232211624 0 430.8885986208916 PEAK CID FTMS 0 0 0 4190 229038.296875 0.6284646272935274 51 -1.702352523803711 1 Unmodified _DLGRPHHSIRC_ ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY 4.897010918128616 0.4761840153648597 1 G 1 10 6.9897 0.0 0.0 0.81298 0.0 0.0 372.5200855030685 427.1937655084594 799.7138510115279 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 0.81298 + + 11 + 1 2.391 55320.2 1.0 1050 3139 4190 DOHH2_400M_050219_1,4191 DOHH2_400M_050219_1,4191,DLGRPHHSIRC False False GEVGKTTGI 21.562361 430.888598620892 1161401.75 4190.0 ENSG00000131473|ENST00000352035|ACLY;;nc|ENSG00000131473|P53396-2|ACLY;;nc|ENSG00000131473|P53396-3|ACLY 3.0535585085550943 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4192 21.568 303.0 271990.0 25 0 19620.0 -1 0 109 534.3117833872244 533.3045069206244 1 534.3119994997978 MULTI CID FTMS 0 0 0 4190 289335.34375 0.1343560624133749 -91 1.497722625732422 2 1 Y 1 -1 12.474 0.0 0.0 2.339 0.0 0.0 352.23016412452904 0.0 352.23016412452904 0.0 2.2931892451282465 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.339 - 20 + 1 2.391 70908.3 1.0 1051 3139 4190 DOHH2_400M_050219_1,4192 DOHH2_400M_050219_1,4192, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4194 21.574 173.0 341020.0 25 0 31741.0 -1 MIITIGQSI 9 90 517.2856139466651 0 517.2859374880791 PEAK CID FTMS 0 0 0 4193 219440.625 0.1612315138601562 -29 0.4481430053710937 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))IITIGQSI_ ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1 6.723162845929126 0.3444685223463734 1 S 1 -1 8.8958 0.0 0.0 0.86154 0.0 0.0 516.3031482040739 426.2098787897094 942.5130269937832 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.2302046884880938 0.0 S 0.86154 + + 4 + 1 2.391 48992.5 1.0 1052 3140 4193 DOHH2_400M_050219_1,4194 DOHH2_400M_050219_1,4194,MIITIGQSI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4195 21.575 54.0 1241300.0 25 0 130990.0 + 19425 LEVISIQLEL 10 94 386.2313033376254 1155.672080613076 3 386.2309753298759 MULTI CID FTMS 0 0 0 4193 741888.875 0.6787679522760145 -4 0.0238819122314453 2 Unmodified _LEVISIQLEL_ REV__ENSG00000104885|ENST00000398665|DOT1L;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L 14.218169984304629 0.6089749286722269 1 E{I|L} 2 -1 26.013 0.0 0.0 2.2509 0.0 0.0 895.535060651663 0.0 895.535060651663 0.0 16.982478080142194 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 E{I|L} 2.2509 + + 70 1 2.391 60131.6 1.0 1053 3140 4193 DOHH2_400M_050219_1,4195 DOHH2_400M_050219_1,4195,LEVISIQLEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4196 21.589 800.0 123860.0 25 0 26379.0 + 11229 GEQGDIEPRRM 11 89 644.3088389630533 1286.6031249929065 2 644.3092529177666 MULTI CID FTMS 0 0 0 4193 107589.3984375 0.8777939861923515 -4 0.0238819122314453 3 Unmodified _GEQGDIEPRRM_ ENSG00000145907|ENST00000356245|G3BP1 29.43715596616401 0.4010092210691691 1 {[DA]|[EG]}{I|L}{[QN]|[E{I|L}]|[KN]}E{I|L}DG 9 7 34.332 0.0 0.0 2.6684 0.0 0.0 0.0 328.12542226472505 328.12542226472505 22.73773107713894 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 {[DA]|[EG]}{I|L}{[QN]|[E{I|L}]|[KN]}E{I|L}DG 2.6684 - 453 1 2.391 76818.8 0.5199999809265137 1054 3140 4193 DOHH2_400M_050219_1,4196 DOHH2_400M_050219_1,4196,GEQGDIEPRRM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4199 21.598 97.0 692530.0 25 0 82216.0 + 11230 GEQGDIEPRRM 11 81 429.8751798877346 1286.603710263404 3 429.8753234744072 MULTI CID FTMS 0 0 0 4198 258877.734375 0.8505756880642101 -1 0.0040111541748046 1 Unmodified _GEQGDIEPRRM_ ENSG00000145907|ENST00000356245|G3BP1 27.22323531849824 0.4529927607131788 1 {[DA]|[EG]}Q[DG]{I|L}EE 8 4 46.885 0.0 0.0 3.6441 0.0 0.0 0.0 426.2322481744751 426.2322481744751 36.42790030352131 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.4247425010840047 {[DA]|[EG]}Q[DG]{I|L}EE 3.6441 - 82 + 1 2.389 61456.5 1.0 1055 3142 4198 DOHH2_400M_050219_1,4199 DOHH2_400M_050219_1,4199,GEQGDIEPRRM False True GEQGDIEPRRM 21.597847 429.875323474407 2893355.0625 4198.0 ENSG00000145907|ENST00000356245|G3BP1 6.655824025472005 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4200 21.612 800.0 135680.0 25 0 11670.0 + 44347 YLQEKRNTL 9 105 582.8222905833527 1163.6300282335053 2 582.8224365115166 MULTI CID FTMS 0 0 0 4198 112582.359375 0.6741054989222203 -1 0.0040111541748046 2 Unmodified _YLQEKRNTL_ ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B 51.629811660486645 0.0367964933207742 1 Y{I|L}QEK 5 4 81.81 0.0 0.0 7.0306 0.0 0.0 0.0 499.2661837213501 499.2661837213501 67.85789402675583 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.805462187404089 0.7302046884880937 + Y{I|L}QEK 7.0306 + + 442 + 1 2.389 83388.9 0.6399999856948853 1056 3142 4198 DOHH2_400M_050219_1,4200 DOHH2_400M_050219_1,4200,YLQEKRNTL True True YLQEKRNTL 21.61168 582.822436511517 794819.0 4198.0 ENSG00000008869|ENST00000233099|HEATR5B;;nc|ENSG00000008869|Q9P2D3-3|HEATR5B 2.373476028442383 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4201 21.626 800.0 288110.0 25 0 76904.0 + 8756 EVRKRLNEL 9 141 578.8433427342826 1155.672132535365 2 578.8431884646416 MULTI CID FTMS 0 0 0 4198 160622.234375 0.7589575700713366 -1 0.0040111541748046 3 Unmodified _EVRKRLNEL_ ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1 30.7034409873982 0.1405282614900322 1 {I|L}EAAK 5 8 31.655 0.0 0.0 2.7391 0.0 0.0 0.0 640.3472994440061 640.3472994440061 17.574908058443608 0.0 0.0 0.0 0 0.5629529932484498 0.0 0.3807196863200844 0.0 {I|L}EAAK 2.7391 - 114 + 1 2.389 175435.2 0.75 1057 3142 4198 DOHH2_400M_050219_1,4201 DOHH2_400M_050219_1,4201,EVRKRLNEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4204 21.646 800.0 101370.0 25 0 5715.4 + -1 EMETKQMQAF 10 124 629.7763327452645 0 629.7770263552666 PEAK CID FTMS 0 0 0 4203 131401.53125 0.0148145915995028 -10 0.0935440063476562 1 Oxidation (M) _EM(Oxidation (M))ETKQMQAF_ REV__ENSG00000137877|ENST00000320955|SPTBN5 21.53697664764585 0.2858915239208219 1 ANQQAEDH 8 -1 65.844 0.0 0.0 5.2359 0.0 0.0 165.08053138267934 196.07306848697505 361.1535998696544 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.6549471895720984 1.0941876774005248 ANQQAEDH 5.2359 - 2285 + 1 2.389 62793.3 0.6399999856948853 1058 3144 4203 DOHH2_400M_050219_1,4204 DOHH2_400M_050219_1,4204,EMETKQMQAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4205 21.66 800.0 174440.0 25 0 8931.2 + 7250 EESNYELEGK 10 132 599.2671979073444 1196.5198428814888 2 599.2676879763603 MULTI CID FTMS 0 0 0 4203 166196.4375 0.2504071604874795 -6 0.0768337249755859 2 Unmodified _EESNYELEGK_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 57.24910588100465 0.0438022649904578 1 EESNYE{I|L}EGK 10 0 + 88.123 0.0 0.0 7.365 7.365 90.562 0.0 0.0 0.0 62.803590870496144 15.81947019791552 15.81947019791552 9.164539485499247 0 0.3494850021680094 1.5228787452803376 0.8252574989159953 1.2553407629038813 + + EESNYE{I|L}EGK;EESGGYE{I|L}EGK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{[WN]|[YH]}{[DS]|[MA]|[CV]|TT}EGK;EE[Y{I|L}]{[WN]|[YH]}S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[NS]{I|L}{[QN]|[E{I|L}]|[KN]}{[YD]|[{M(Oxidation (M))|F}M]}S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[NS]{I|L}[YG]{[WN]|[YH]}S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[NS]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[WH]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}YE{[WN]|[YH]}S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[NS]Y{[VA]|[{I|L}G]}{[WN]|[YH]}S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KG]E{[QN]|[E{I|L}]|[KN]}{[YD]|[{M(Oxidation (M))|F}M]}S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7.365;6.599;1.5476;1.5206;0.90466;0.78253;0.37312;0.32561;0.26863;0.076821 +;-;-;-;-;-;-;-;-;- + 667 + 1 2.389 106535.4 0.7400000095367432 1059 3144 4203 DOHH2_400M_050219_1,4205 DOHH2_400M_050219_1,4205,EESNYELEGK True True EESNYELEGK 21.659724 599.26768797636 6791040.0 4203.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 7.990281899770101 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 4207 21.665 38.0 4558600.0 25 0 433800.0 -1 0 53 624.7864469209092 2495.1166818172364 4 625.0376464724541 MULTI CID FTMS 0 0 0 4206 2396218.25 0.7826467004329233 -2 0.0342044830322265 1 1 [RD]WRDD 6 -1 46.159 0.0 0.0 1.85 0.0 0.0 0.0 1648.727712585577 1648.727712585577 35.36175320500661 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.3494850021680094 [RD]WRDD 1.85 - 56 1 2.389 135660.8 1.0 1060 3145 4206 DOHH2_400M_050219_1,4207 DOHH2_400M_050219_1,4207, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4208 21.674 530.0 147310.0 25 0 22828.0 + 43459 WTSSQHNAE 9 116 530.2277870282904 1058.4410211233808 2 530.2281982302666 MULTI CID FTMS 0 0 0 4206 92028.125 0.09626696399186 15 -0.4491519927978515 2 Unmodified _WTSSQHNAE_ REV__ENST00000240851.8_1_3:100428529-100432612:+|nuORF;REV__ENST00000479672.5_1_3:100429900-100432609:+|nuORF 10.073929032068715 0.563993802247229 1 [HD]EAQQNA{M(Oxidation (M))|F} 9 -1 + 61.761 0.0 0.0 5.8351 5.8351 87.436 0.0 0.0 0.0 13.925449767853308 46.27645072035655 13.925449767853308 9.208187539523747 0 0.7429928190999391 0.6777807052660807 0.566901560044258 0.0 [HD]EAQQNA{M(Oxidation (M))|F};[HD]EAQ[AG]NA{M(Oxidation (M))|F};[HD]EAQQGGA{M(Oxidation (M))|F};[HD]EA[AG]QNA{M(Oxidation (M))|F};[HD]EAQ[AG]GGA{M(Oxidation (M))|F};[HD]EA[AG]QGGA{M(Oxidation (M))|F};[HD]EA[AG][AG]NA{M(Oxidation (M))|F};{[WT]|[RM]}{M(Oxidation (M))|F}HHNA{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}D[VS]NA{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]MD[VS]NA{M(Oxidation (M))|F} 5.8351;4.9651;4.9651;4.9651;4.0993;4.0993;4.0993;0.92322;0.9032;0.83995 -;-;-;-;-;-;-;-;-;- 188 1 2.389 67628.4 1.0 1061 3145 4206 DOHH2_400M_050219_1,4208 DOHH2_400M_050219_1,4208,WTSSQHNAE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4209 21.679 273.0 457240.0 25 0 65371.0 32173 RVTAAWGG 8 117 409.2197989538861 816.4250449745722 2 409.2195312380791 MULTI CID FTMS 0 0 0 4206 123303.0390625 0.9213229423979538 -2 0.0342044830322265 3 Unmodified _RVTAAWGG_ ENST00000371741.5_1_20:48098796-48099132:-|nuORF 7.910154910731844 0.7763180056447161 1 [WK]{I|L}AHY 6 7 + 41.177 0.0 0.0 5.0436 5.0436 81.976 0.0 0.0 0.0 4.973024840566467 28.958734641205623 4.973024840566467 7.271212547196626 0 1.4802046884880935 0.0 0.0 0.0 [WK]{I|L}AHY;[WK]A{I|L}HY;[KA]W{I|L}HY 5.0436;4.153;2.5561 -;-;- 110 1 2.389 101185.3 1.0 1062 3145 4206 DOHH2_400M_050219_1,4209 DOHH2_400M_050219_1,4209,RVTAAWGG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4211 21.684 56.0 807370.0 25 0 279030.0 + + 28550 PTGARPSAL 9 59 435.2458069892349 868.4770610452697 2 435.2456542849541 MULTI CID FTMS 0 0 0 4210 1008252.8125 0.3881661390714645 6 -0.1815834045410156 1 Unmodified _PTQRSAPL_ ENST00000473611.5_1_6:33247055-33247262:-|nuORF;ENSG00000227057|ENST00000374617|WDR46 19.256988751693697 0.6264283240490721 1 PT 2 -1 45.217 0.0 0.0 5.2064 0.0 0.0 0.0 667.3528926273528 667.3528926273528 32.74227503252014 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 PT 5.2064 + + 14 + 1 2.389 42033.7 1.0 1063 3146 4210 DOHH2_400M_050219_1,4211 DOHH2_400M_050219_1,4211,PTQRSAPL False False PTGARPSAL 21.683604 435.245654284954 24578474.0 4210.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 2.1771114468574524 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4212 21.689 297.0 289500.0 25 0 40883.0 34645 SPPPPPPPP 9 110 441.7399142304098 881.4652755276196 2 441.7396728396416 MULTI CID FTMS 0 0 0 4210 150236.234375 0.261621567820559 28 -1.109029769897461 2 Unmodified _SPPPPPPPP_ ENSG00000099999|ENST00000382363|RNF215;ENSG00000100312|ENST00000216139|ACR;ENSG00000103479|ENST00000262133|RBL2;ENSG00000107816|ENST00000454422|LZTS2;ENSG00000109920|ENST00000263773|FNBP4;ENSG00000120549|ENST00000376454|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;ENSG00000136754|ENST00000376140|ABI1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000164944|ENST00000297591|VIRMA;ENSG00000184863|ENST00000401878|RBM33;ENSG00000260428|ENST00000567180|SCX;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;nc|ENSG00000109920|Q8N3X1-2|FNBP4;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000015285|ENST00000376701|WAS;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000100201|ENST00000403230|DDX17;REV__ENSG00000107816|ENST00000454422|LZTS2;REV__ENSG00000112541|ENST00000539869|PDE10A;REV__ENSG00000127666|ENST00000248244|TICAM1;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENSG00000141867|ENST00000679869|BRD4;REV__ENSG00000143006|ENST00000371445|DMRTB1;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000204334|ENST00000697325|ERICH2;REV__ENSG00000242265|ENST00000612748|PEG10;REV__ENST00000216019.11_1_22:38881942-38884127:-|nuORF;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF;REV__ENST00000361272.8_2_8:17102747-17104366:-|nuORF;REV__ENST00000431312.2_1_22:38881942-38884127:-|nuORF;REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF;REV__ENST00000482108.1_2_7:94293788-94294991:+|nuORF;REV__ENST00000508096.1_1_10:126605730-126631034:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100201|Q92841-1|DDX17;REV__nc|ENSG00000100201|Q92841-2|DDX17;REV__nc|ENSG00000100201|Q92841-3|DDX17;REV__nc|ENSG00000139218|Q99590-2|SCAF11;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000168066|Q15637-5|SF1;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 81.86404211737425 0.017065112157077 1 [PS]PPPP[YK] 8 3 + 64.474 0.0 0.0 7.3144 7.3144 95.256 0.0 0.0 0.0 20.66946789630613 50.49471895720984 20.66946789630613 21.760912590556813 0 1.1989700043360187 2.0 1.3098943791441968 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[PS][YK]P[YK];[PS]P[YK][YK];{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]MPPP;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]M[YK];{[NV]|[RG]}[YV]P[YK];{[HG]|PP}S[YK][YK];{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}[QT]PP 7.3144;4.8457;4.7466;3.7424;3.0016;1.3715;1.3577;1.2737;0.66522 -;-;-;-;-;-;-;-;- 167 1 2.389 72159.4 1.0 1064 3146 4210 DOHH2_400M_050219_1,4212 DOHH2_400M_050219_1,4212,SPPPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4213 21.703 800.0 122040.0 25 0 16209.0 + 10341 FSETGGGEKY 10 142 537.7404225121827 1073.466292091165 2 537.7401000857353 MULTI CID FTMS 0 0 0 4210 116334.5 1.0 0 0.0 3 Unmodified _FSETGGGEKY_ ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 63.22749603027936 0.0281198777558511 1 {M(Oxidation (M))|F}SETGNEKY 9 2 + 69.395 0.0 0.0 6.4646 6.4646 83.734 0.0 0.0 0.0 9.992369838338462 4.037786910244407 4.037786910244407 3.881801713828807 0 0.4247425010840047 0.0 1.274227503252014 0.3054621874040891 {M(Oxidation (M))|F}SETGNEKY;{M(Oxidation (M))|F}SETGGGEKY;{M(Oxidation (M))|F}SETGNEYK;{M(Oxidation (M))|F}SETNGEKY;{M(Oxidation (M))|F}SETGGGEYK;{M(Oxidation (M))|F}SETNGEYK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DYVVESE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YG]QQESE;[DP]S[RP]GTESE;[DP]S[VP]GGTESE 6.4646;6.103;6.0884;6.0553;5.7268;5.6792;5.5337;4.835;4.6696;4.3121 -;+;-;-;-;-;-;-;-;- + 933 + 1 2.389 80705.8 0.5600000023841858 1065 3146 4210 DOHH2_400M_050219_1,4213 DOHH2_400M_050219_1,4213,FSETGGGEKY True True FSETGGGEKY 21.702869 537.740100085735 492172.15625 4210.0 ENSG00000187240|ENST00000375735|DYNC2H1;;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 7.310405731201172 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4214 21.707 224.0 208290.0 25 0 11382.0 + -1 EQKQSTLQM 9 95 554.7667860874072 1107.5190192416144 2 554.7689086794853 MULTI CID FTMS 0 0 0 4210 128294.9375 0.0598086432493924 -10 0.1347827911376953 4 Oxidation (M) _EQKQSTLQM(Oxidation (M))_ REV__ENST00000546026.1_3_12:120172199-120173150:-|nuORF 24.020572477871973 0.2255576514309169 1 E{M(Oxidation (M))|F}[QP]Y 5 -1 38.077 0.0 0.0 3.438 0.0 0.0 425.2130299298844 0.0 425.2130299298844 0.0 23.472711111689563 0.0 0.0 0 1.110924374808178 0.0 0.7134679910804405 0.0 E{M(Oxidation (M))|F}[QP]Y 3.438 - 280 1 2.389 42340.2 1.0 1066 3146 4210 DOHH2_400M_050219_1,4214 DOHH2_400M_050219_1,4214,EQKQSTLQM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4215 21.721 800.0 111780.0 25 0 24850.0 -1 0 59 1149.9487636739805 2297.882974414761 2 1149.947680652142 MULTI CID FTMS 0 0 0 4210 85382.234375 0.4064794203011531 -5 0.0897693634033203 5 1 ANMT 4 -1 24.034 0.0 0.0 1.0459 0.0 0.0 1413.5106732446422 464.1804293268188 1877.691102571461 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.6139829889124311 ANMT 1.0459 - 250 + 1 2.389 70095.4 0.3600000143051147 1067 3146 4210 DOHH2_400M_050219_1,4215 DOHH2_400M_050219_1,4215, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4217 21.726 90.0 418000.0 25 0 20635.0 + 24068 LYDSQCGSPFA 11 91 594.2563856147403 1186.4982182962806 2 594.2582275271416 MULTI CID FTMS 0 0 0 4216 364503.75 0.7693291972201013 2 -0.0313587188720703 1 Unmodified _LYDSQCGSPFA_ REV__ENST00000522969.1_1_8:1808097-1817553:+|nuORF 13.042465956692816 0.7638483625850725 1 [HQ][WE]QQNA{M(Oxidation (M))|F} 9 -1 [HQ][WE]QQN + + 19.464 20.353 2.1415 1.6405 1.6405 48.637 0.0 0.0 0.0 0.0 -0.8889476237504113 -0.8889476237504113 0.0 0 0.0 0.0 0.0 0.0 [HQ][WE]QQNA{M(Oxidation (M))|F} 1.6405 - 99 + 1 2.389 34362.8 1.0 1068 3147 4216 DOHH2_400M_050219_1,4217 DOHH2_400M_050219_1,4217,LYDSQCGSPFA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4218 21.727 41.0 1428900.0 25 0 527290.0 + 16728 KEYERFSKY 9 62 417.2120889806041 1248.6144375420124 3 417.2119018435478 MULTI CID FTMS 0 0 0 4216 1006491.375 0.9859797305467698 -2 0.0612125396728515 2 Unmodified _KEYERFSKY_ ENSG00000123136|ENST00000242776|DDX39A;ENSG00000198563|ENST00000396172|DDX39B;ENST00000481456.1_1_6:31503008-31508408:-|nuORF;ENST00000586558.5_1_19:14522263-14523533:-|nuORF;ENST00000589318.5_1_19:14520811-14524032:-|nuORF;ENST00000590260.5_1_19:14522263-14530155:-|nuORF;nc|ENSG00000123136|O00148-2|DDX39A;nc|ENSG00000123136|O00148-3|DDX39A;nc|ENSG00000198563|Q13838-2|DDX39B 22.736283301280096 0.2418982879461534 1 KY{M(Oxidation (M))|F}YE 5 6 42.039 0.0 0.0 3.3669 0.0 0.0 0.0 515.2747286432249 515.2747286432249 26.554556341805764 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.0 0.0 KY{M(Oxidation (M))|F}YE 3.3669 - 52 + 1 2.389 58559.2 1.0 1069 3147 4216 DOHH2_400M_050219_1,4218 DOHH2_400M_050219_1,4218,KEYERFSKY False True KEYERFSKY 21.7273 417.211901843548 5144163.0 4216.0 ENST00000586558.5_1_19:14522263-14523533:-|nuORF;;nc|ENSG00000123136|O00148-2|DDX39A;;nc|ENSG00000123136|O00148-3|DDX39A;;ENST00000589318.5_1_19:14520811-14524032:-|nuORF;;ENSG00000123136|ENST00000242776|DDX39A;;ENSG00000198563|ENST00000396172|DDX39B;;chr19:14411139-14411506|16|22.31|0.84|4.73|-|0|None,DDX39A|1;;ENST00000590260.5_1_19:14522263-14530155:-|nuORF;;nc|ENSG00000198563|Q13838-2|DDX39B;;ENST00000481456.1_1_6:31503008-31508408:-|nuORF 1.2042654951413472 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4219 21.729 73.0 527230.0 25 0 57449.0 -1 CRHSTESGDGF 11 73 626.7520287712277 1251.4895046092554 2 626.7518798708916 MULTI CID FTMS 0 0 0 4216 758995.875 0.3199519584675651 -5 0.1278743743896484 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))RHSTESGDGF_ ENST00000302060.9_1_5:138747802-138747928:-|nuORF 17.11289562659939 0.6791789249425932 1 SSY 3 -1 32.747 0.0 0.0 2.6167 0.0 0.0 896.3512732633554 0.0 896.3512732633554 0.0 14.51544993495972 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.0 SSY 2.6167 - 172 + 1 2.389 33483.5 1.0 1070 3147 4216 DOHH2_400M_050219_1,4219 DOHH2_400M_050219_1,4219,CRHSTESGDGF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4220 21.733 239.0 375780.0 25 0 23161.0 + 44276 YLKSKGAEI 9 117 504.789514270002 1007.564475606804 2 504.7893859744072 MULTI CID FTMS 0 0 0 4216 196727.703125 0.6798464664441652 -3 0.0914211273193359 4 Unmodified _YLLKETNK_ ENST00000531186.5_1_11:32605433-32610279:+|nuORF;ENSG00000149100|ENST00000531120|EIF3M 25.399314129420983 0.5099049743284904 1 Y{I|L}KS 4 5 55.226 0.0 0.0 5.4811 0.0 0.0 0.0 513.2691744440061 513.2691744440061 44.38863141958127 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 Y{I|L}KS 5.4811 - 250 + 1 2.389 71150.8 1.0 1071 3147 4216 DOHH2_400M_050219_1,4220 DOHH2_400M_050219_1,4220,YLLKETNK False False YLKSKGAEI 21.733483 504.789385974407 1234499.75 4216.0 ENST00000531186.5_1_11:32605433-32610279:+|nuORF;;ENSG00000149100|ENST00000531120|EIF3M 3.8753603299458814 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4222 21.738 107.0 944410.0 25 0 76089.0 -1 0 42 832.7131149437287 2495.117515431386 3 833.0477783083916 MULTI CID FTMS 0 0 0 4221 673494.25 1.0 0 0.0 1 1 D 1 -1 10.485 0.0 0.0 0.4202 0.0 0.0 1651.753305383674 725.3165945309097 2377.0698999145834 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 D 0.4202 - 4 + 1 2.389 78617.0 1.0 1072 3148 4221 DOHH2_400M_050219_1,4222 DOHH2_400M_050219_1,4222, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4223 21.748 531.0 152400.0 25 0 9270.3 38475 TSDMMGRMSY 10 106 605.7286909581524 1209.4428289831046 2 605.7288696169853 MULTI CID FTMS 0 0 0 4221 154924.515625 0.7133762200755828 -2 0.0546226501464843 2 2 Oxidation (M) _TSDM(Oxidation (M))M(Oxidation (M))GRMSY_ ARID1A|p.P1568Lfs*44|1|0.31|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A 41.8396318013385 0.1381409678234242 1 [VG]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}NNND 9 9 56.948 0.0 0.0 4.7086 0.0 0.0 0.0 185.0572298639281 185.0572298639281 41.46386318471041 0.0 0.0 0.0 0 0.7302046884880938 1.3979400086720375 0.7887254899964358 0.7134679910804405 [VG]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}NNND 4.7086 - 527 + 1 2.389 61564.3 1.0 1073 3148 4221 DOHH2_400M_050219_1,4223 DOHH2_400M_050219_1,4223,TSDMMGRMSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4224 21.75 101.0 643410.0 25 0 106990.0 26797 PAPPPPPPP 9 81 433.74221334002834 0 433.7421752810478 PEAK CID FTMS 0 0 0 4221 475739.71875 0.846397777968786 2 -0.0419979095458984 3 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;ENSG00000103495|ENST00000322945|MAZ;ENSG00000105429|ENST00000251268|MEGF8;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139687|ENST00000267163|RB1;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000158195|ENST00000618852|WASF2;ENSG00000165821|ENST00000537235|SALL2;ENSG00000167771|ENST00000301459|RCOR2;ENSG00000169862|ENST00000304623|CTNND2;ENSG00000171634|ENST00000306378|BPTF;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000182601|ENST00000331351|HS3ST4;ENSG00000184937|ENST00000452863|WT1;ENSG00000196367|ENST00000456197|TRRAP;ENSG00000197483|ENST00000598519|ZNF628;ENSG00000205177|ENST00000379011|C11orf91;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000272333|ENST00000420124|KMT2B;ENST00000263228.3_1_9:33817570-33817774:+|nuORF;ENST00000378204.6_1_8:119123785-119123992:-|nuORF;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;ENST00000592092.1_1_19:36224173-36224410:+|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000103495|P56270-2|MAZ;nc|ENSG00000103495|P56270-3|MAZ;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000169862|Q9UQB3-2|CTNND2;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;nc|nan|Q3C1V1-2|C11orf91;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000060749|ENST00000650167|QSER1;REV__ENSG00000077420|ENST00000376236|APBB1IP;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000108819|ENST00000612501|PPP1R9B;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000112320|ENST00000317357|SOBP;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__ENSG00000126464|ENST00000418929|PRR12;REV__ENSG00000136848|ENST00000408936|DAB2IP;REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000168874|ENST00000306279|ATOH8;REV__ENSG00000171450|ENST00000302625|CDK5R2;REV__ENSG00000176058|ENST00000409012|TPRN;REV__ENSG00000176165|ENST00000313071|FOXG1;REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENSG00000182484|ENST00000359512|WASH6P;REV__ENSG00000188620|ENST00000357878|HMX3;REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENSG00000247746|ENST00000500968|USP51;REV__ENSG00000274588|ENST00000611977|DGKK;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000400706.3_1_12:88275-90926:+|nuORF;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;REV__ENST00000557932.5_1_15:102513813-102516466:+|nuORF;REV__ENST00000602719.5_1_16:85784553-85784670:-|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000168874|Q96SQ7-2|ATOH8;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6;REV__nc|ENSG00000234769|A8MWX3|WASH4P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P;REV__nc|ENSG00000292372|Q9NQA3|WASH6P 67.41302359171755 0.0146725378412413 1 PPP 3 6 26.242 0.0 0.0 3.0321 0.0 0.0 309.1681518482665 262.12067590885005 571.2888277571166 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 + PPP 3.0321 + + 51 + 1 2.389 55307.0 1.0 1074 3148 4221 DOHH2_400M_050219_1,4224 DOHH2_400M_050219_1,4224,PAPPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4225 21.752 121.0 350200.0 25 0 48435.0 + 31381 RNVSTGDVNVE 11 56 595.2937509822386 1188.5729490312772 2 595.2945434451103 MULTI CID FTMS 0 0 0 4221 408966.5625 0.6926537869528034 -3 0.0737190246582031 4 Unmodified _RNVSTGDVNVE_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 17.04857598603903 0.6805168445818576 1 {[NV]|[RG]}RST[DG]VNVE 11 2 + 58.219 0.0 0.0 4.8982 4.8982 82.717 0.0 0.0 0.0 7.340610492820652 53.61487959862398 7.340610492820652 9.128498242810998 0 0.9247425010840048 0.0 0.0 0.0 {[NV]|[RG]}RST[DG]VNVE;{[NV]|[RG]}RST[DG]VGGVE;{[NV]|[RG]}RSWWNVE;[KG][RD]T[DG]VNVE;{[NV]|[RG]}RSWWGGVE;{[QS]|[NT]}[Q{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}VNVE;{[QS]|[NT]}[Q{I|L}]T[RD]NVE;[KG][RD]WWNVE 4.8982;4.1302;4.0487;3.4258;3.2739;2.9391;2.6859;2.5762 -;-;-;-;-;-;-;- 223 1 2.389 39417.1 1.0 1075 3148 4221 DOHH2_400M_050219_1,4225 DOHH2_400M_050219_1,4225,RNVSTGDVNVE False True RNVSTGDVNVE 21.752292 595.29454344511 2817747.5 4221.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 7.7753214836120605 2.0 True 11.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 4227 21.764 470.0 297540.0 25 0 15703.0 + 45419 YTDGPGGSGQY 11 165 551.2278744887931 1100.441196044386 2 551.2280761599541 MULTI CID FTMS 0 0 0 4226 173768.796875 0.7650482189650347 -4 0.0925712585449218 1 Unmodified _YTDGPGGSGQY_ ENSG00000090975|ENST00000320201|PITPNM2;ENSG00000110697|ENST00000356404|PITPNM1;ENST00000451868.2_1_12:123484929-123519149:-|nuORF;nc|ENSG00000090975|Q9BZ72-2|PITPNM2;nc|ENSG00000110697|O00562-2|PITPNM1 21.53697664764585 0.586507868110548 1 [YE]GS 4 8 33.768 0.0 0.0 3.0686 0.0 0.0 0.0 661.2583401696392 661.2583401696392 15.489260108058108 0.0 0.0 0.0 0 0.805462187404089 1.3010299956639813 0.0 0.0 [YE]GS 3.0686 - 1052 1 2.389 106829.8 1.0 1076 3149 4226 DOHH2_400M_050219_1,4227 DOHH2_400M_050219_1,4227,YTDGPGGSGQY False True YTDGPGGSGQY 21.764 551.228076159954 1626861.75 4226.0 ENSG00000090975|ENST00000320201|PITPNM2;;nc|ENSG00000110697|O00562-2|PITPNM1;;ENSG00000110697|ENST00000356404|PITPNM1;;ENST00000451868.2_1_12:123484929-123519149:-|nuORF;;nc|ENSG00000090975|Q9BZ72-2|PITPNM2 5.983160654703776 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4228 21.768 181.0 545750.0 25 0 30996.0 + 7578 EIKRINKEL 9 135 381.5677144151988 1141.6813138457965 3 381.5677368044853 MULTI CID FTMS 0 0 0 4226 208439.390625 0.8464253225825179 -1 0.0188522338867187 2 Unmodified _EIKRINKEL_ ENSG00000183020|ENST00000448903|AP2A2;ENSG00000196961|ENST00000354293|AP2A1;ENST00000600199.1_1_19:50270291-50299453:+|nuORF;nc|ENSG00000183020|O94973-2|AP2A2;nc|ENSG00000183020|O94973-3|AP2A2;nc|ENSG00000196961|O95782|AP2A1 27.628801355627647 0.1796483985696185 1 K{M(Oxidation (M))|F}{I|L} 3 7 35.194 0.0 0.0 3.0827 0.0 0.0 735.4386463849625 0.0 735.4386463849625 0.0 24.481048713086423 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.7614393726401688 K{M(Oxidation (M))|F}{I|L} 3.0827 - 128 1 2.389 80147.7 1.0 1077 3149 4226 DOHH2_400M_050219_1,4228 DOHH2_400M_050219_1,4228,EIKRINKEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4229 21.776 451.0 189930.0 25 0 8817.0 + 24329 MEGKINKQL 9 131 530.795080741882 1059.575608550564 2 530.7944824099541 MULTI CID FTMS 0 0 0 4226 125740.1328125 0.7242437480251155 -2 0.0313587188720703 3 Unmodified _MEGKINKQL_ ENSG00000055044|ENST00000264279|NOP58;ENST00000472050.5_1_2:203130664-203149064:+|nuORF;ENST00000478941.1_1_2:203147084-203155055:+|nuORF;ENST00000488403.5_1_2:203130664-203149205:+|nuORF 41.95555342248728 0.0647214845423414 1 ME{I|L}R 4 6 51.076 0.0 0.0 4.8204 0.0 0.0 0.0 527.2778414361936 527.2778414361936 37.40616833243811 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.6747425010840047 ME{I|L}R 4.8204 - 457 + 1 2.389 69842.7 1.0 1078 3149 4226 DOHH2_400M_050219_1,4229 DOHH2_400M_050219_1,4229,MEGKINKQL True True MEGKINKQL 21.775512 530.794482409954 871829.875 4226.0 ENST00000472050.5_1_2:203130664-203149064:+|nuORF;;ENSG00000055044|ENST00000264279|NOP58;;ENST00000488403.5_1_2:203130664-203149205:+|nuORF;;ENST00000478941.1_1_2:203147084-203155055:+|nuORF 3.178759415944417 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4231 21.787 515.0 255780.0 25 0 23567.0 + 30751 HIRDRAHIL 9 126 377.5564545819743 1129.647534346123 3 377.5562011599541 MULTI CID FTMS 0 0 0 4230 98298.3125 0.4681340157825306 -4 0.0966205596923828 1 Unmodified _RHLDARHLI_ ENSG00000089693|ENST00000203630|MLF2 29.84058131909904 0.1515068451768857 1 {I|L}{I|L} 2 7 16.938 0.0 0.0 1.4994 0.0 0.0 885.4679059054964 0.0 885.4679059054964 0.0 1.989700043360188 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 1.4994 + + 47 + 1 2.389 107491.8 1.0 1079 3150 4230 DOHH2_400M_050219_1,4231 DOHH2_400M_050219_1,4231,RHLDARHLI False False HIRDRAHIL 21.787044 377.556201159954 1495691.125 4230.0 ENSG00000089693|ENST00000203630|MLF2 2.878224015235901 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4232 21.797 589.0 240850.0 25 0 15420.0 + 35565 STQMTITTQK 10 138 569.7917062688438 1137.5688596044874 2 569.7927734255791 MULTI CID FTMS 0 0 0 4230 193627.375 0.2599226433389096 -5 0.1157169342041015 2 Unmodified _STQMTITTQK_ ENSG00000181143|ENST00000397910|MUC16 96.93554129104106 0.0088365951652222 1 {[MG]|[TS]}QMT{I|L}TTQK 10 0 + 78.833 0.0 0.0 6.9299 6.9299 89.573 0.0 0.0 0.0 5.764837301042718 16.94779055848982 5.764837301042718 9.164539485499247 0 0.805462187404089 0.0 1.674742501084005 1.2884157219675487 + + {[MG]|[TS]}QMT{I|L}TTQK;{[MG]|[TS]}[AG]MT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}TT[AG]K;{[MG]|[TS]}QMT{I|L}T[KS]AA;{[MG]|[TS]}[AG]MT{I|L}TT[AG]K;{[MG]|[TS]}QMT{I|L}[YV]VP;{[MG]|[TS]}[AG]MT{I|L}T[KS]AA;{[MG]|[TS]}[AG]MT{I|L}[YV]VP;{[DA]|[EG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T{I|L}TTQK;{[MG]|[TS]}[YN][VP]TTQK 6.9299;6.1243;6.1243;5.4401;5.3218;4.6574;4.6376;3.5171;3.3408;3.0424 +;-;-;-;-;-;-;-;-;- + 1670 + 1 2.389 110012.6 1.0 1080 3150 4230 DOHH2_400M_050219_1,4232 DOHH2_400M_050219_1,4232,STQMTITTQK True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4233 21.811 800.0 193990.0 25 0 22505.0 -1 STSPMMCWMC 10 104 645.7254120363207 1289.4362711394413 2 645.7249633669853 MULTI CID FTMS 0 0 0 4230 116232.0546875 0.4787896581428949 -5 0.1157169342041015 3 2 Carbamidomethyl (C) _STSPMMC(Carbamidomethyl (C))WMC(Carbamidomethyl (C))_ ENST00000575070.1_1_16:20422873-20423011:+|nuORF 10.073929032068715 0.6785112666868882 1 STD 3 -1 33.633 0.0 0.0 2.6083 0.0 0.0 0.0 983.3077569165088 983.3077569165088 -1.059837384595923 0.0 -1.059837384595923 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 STD 2.6083 - 79 + 1 2.389 115667.8 0.5600000023841858 1081 3150 4230 DOHH2_400M_050219_1,4233 DOHH2_400M_050219_1,4233,STSPMMCWMC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4234 21.825 800.0 127030.0 25 0 6839.0 -1 YSLDGSSCCWP 11 134 637.7423029426883 1273.4700529521765 2 637.7422363162041 MULTI CID FTMS 0 0 0 4230 92651.171875 0.7030941990363643 -1 0.0231456756591796 4 Carbamidomethyl (C) _YSLDGSSC(Carbamidomethyl (C))CWP_ ENST00000586632.1_1_16:4774781-4774883:-|nuORF;ENST00000590803.5_1_16:4774781-4776797:-|nuORF 18.1463463914782 0.6576820063886638 1 {[MG]|[TS]}DTSGY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SY 11 -1 + 80.349 0.0 0.0 6.3094 6.3094 90.265 0.0 0.0 0.0 62.39001685630652 16.57577319177794 16.57577319177794 9.542425094393252 0 1.885151878060192 0.0 0.6505149978319906 0.0 {[MG]|[TS]}DTSGY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SY;{[MG]|[TS]}DTSYG{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SY;{[MG]|[TS]}D[MN]Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SY;{[MG]|[TS]}DY[MN]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SY;{[MG]|[TS]}DTSGYG{[DA]|[EG]}[WD];{[MG]|[TS]}DY{[MG]|[TS]}G{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SY;{[MG]|[TS]}DTSYGG{[DA]|[EG]}[WD];{[MG]|[TS]}DTSYN{[DA]|[EG]}[WD];{[MG]|[TS]}DTSG[C(Carbamidomethyl (C))K][C(Carbamidomethyl (C))M]Q;{[MG]|[TS]}M{[DA]|[EG]}GYG[Y{M(Oxidation (M))|F}]Y 6.3094;5.5601;4.5571;4.1824;3.9956;3.7096;3.2462;2.9669;2.8908;2.774 -;-;-;-;-;-;-;-;-;- 1092 + 1 2.389 79620.7 0.5099999904632568 1082 3150 4230 DOHH2_400M_050219_1,4234 DOHH2_400M_050219_1,4234,YSLDGSSCCWP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4236 21.83 15.0 3568900.0 25 0 374740.0 + 11070 GEASRLAHY 9 65 502.2512095079784 1002.4878660827568 2 502.2515136599541 MULTI CID FTMS 0 0 0 4235 3140019.75 0.4099312599210247 4 -0.1051578521728515 1 Unmodified _GEASRLAHY_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814728-149815097:+|nuORF;ENST00000465850.1_1_3:113822098-113822344:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000220323|Q6DRA6|H2BC19P;nc|ENSG00000261716|Q6DN03|H2BC20P 27.628801355627647 0.1796483985696185 1 DAHY 4 6 33.906 0.0 0.0 3.3822 0.0 0.0 498.2940846173844 0.0 498.2940846173844 0.0 22.93666126345022 0.0 0.0 0 1.2134679910804405 0.0 0.0 0.0 DAHY 3.3822 - 43 1 2.383 45215.0 1.0 1083 3151 4235 DOHH2_400M_050219_1,4236 DOHH2_400M_050219_1,4236,GEASRLAHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4237 21.832 100.0 413040.0 25 0 31040.0 + 36763 TEDIQTRQY 9 69 577.2786317595676 1152.542710585935 2 577.2785522341728 MULTI CID FTMS 0 0 0 4235 459239.0 0.3039310627468051 5 -0.1612968444824218 2 Unmodified _TEDIQTRQY_ ENSG00000096063|ENST00000373825|SRPK1;ENSG00000135250|ENST00000393651|SRPK2;ENSG00000184343|ENST00000370101|SRPK3;ENST00000507292.1_1_6:35824956-35836900:-|nuORF;nc|ENSG00000096063|Q96SB4-3|SRPK1;nc|ENSG00000096063|Q96SB4-4|SRPK1;nc|ENSG00000135250|P78362|SRPK2;nc|ENSG00000184343|Q9UPE1-2|SRPK3;nc|ENSG00000184343|Q9UPE1-3|SRPK3;nc|ENSG00000184343|Q9UPE1-4|SRPK3 38.17557092003332 0.0854718145212029 1 TQ{I|L}D[DP] 6 7 44.654 0.0 0.0 3.8743 0.0 0.0 465.2328358380875 0.0 465.2328358380875 0.0 32.43501263708417 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.8494850021680094 TQ{I|L}D[DP] 3.8743 - 76 1 2.383 36530.8 1.0 1084 3151 4235 DOHH2_400M_050219_1,4237 DOHH2_400M_050219_1,4237,TEDIQTRQY True True TEDIQTRQY 21.831924 577.278552234173 7010227.5 4235.0 nc|ENSG00000184343|Q9UPE1-2|SRPK3;;ENSG00000135250|ENST00000393651|SRPK2;;nc|ENSG00000096063|Q96SB4-3|SRPK1;;nc|ENSG00000096063|Q96SB4-4|SRPK1;;nc|ENSG00000135250|P78362|SRPK2;;ENSG00000096063|ENST00000373825|SRPK1;;ENSG00000184343|ENST00000370101|SRPK3;;nc|ENSG00000184343|Q9UPE1-4|SRPK3;;ENST00000507292.1_1_6:35824956-35836900:-|nuORF;;nc|ENSG00000184343|Q9UPE1-3|SRPK3 5.659665107727051 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4238 21.846 800.0 47580.0 25 0 2863.0 + 24697 MNDYDCSMDDP 11 93 653.208523966806 1304.4024950004118 2 653.2097045779228 MULTI CID FTMS 0 0 0 4235 100669.6015625 1.0 0 0.0 3 Unmodified _MNDYDCSMDDP_ REV__ENSG00000204381|ENST00000375614|LAYN;REV__ENST00000525126.5_2_11:111428322-111431180:+|nuORF;REV__nc|ENSG00000204381|Q6UX15-3|LAYN;REV__nc|ENSG00000204381|Q6UX15|LAYN 1.3295316138638542 0.8688751186870782 1 SY 2 -1 17.959 0.0 0.0 1.3768 0.0 0.0 1036.296062970918 0.0 1036.296062970918 0.0 4.859856381998782 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 1.3768 - 40 + 1 2.383 34993.0 0.5199999809265137 1085 3151 4235 DOHH2_400M_050219_1,4238 DOHH2_400M_050219_1,4238,MNDYDCSMDDP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4239 21.851 261.0 323420.0 25 0 25883.0 -1 0 99 534.3117833872244 533.3045069206244 1 534.3121826052666 MULTI CID FTMS 0 0 0 4235 337116.0625 0.1565435668755943 -79 1.391948699951172 4 1 H 1 -1 10.089 0.0 0.0 1.8917 0.0 0.0 378.2375036020681 0.0 378.2375036020681 0.0 10.088643834802156 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.8917 - 13 + 1 2.383 70097.3 1.0 1086 3151 4235 DOHH2_400M_050219_1,4239 DOHH2_400M_050219_1,4239, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4240 21.86 559.0 255820.0 25 0 48362.0 + 14725 IKRQVPALE 9 129 527.3246935948442 1052.6348342564884 2 527.3247558474541 MULTI CID FTMS 0 0 0 4235 150105.140625 0.7863323286243191 -2 0.072671890258789 5 Unmodified _IKRQVPALE_ REV__ENSG00000073350|ENST00000392550|LLGL2;REV__ENST00000545227.6_1_17:73554011-73570984:+|nuORF;REV__nc|ENSG00000073350|Q6P1M3-2|LLGL2 6.723162845929126 0.6799819581413107 1 {NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PK 9 -1 25.158 0.0 0.0 2.39 0.0 0.0 0.0 53.04007848272036 53.04007848272036 11.178630779951972 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.6861818737241735 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PK 2.39 - 126 1 2.383 113599.8 1.0 1087 3151 4235 DOHH2_400M_050219_1,4240 DOHH2_400M_050219_1,4240,IKRQVPALE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4242 21.872 537.0 229090.0 25 0 15891.0 28141 PPPPQPPPP 9 154 462.2531473853991 922.4917418375982 2 462.2531616091728 MULTI CID FTMS 0 0 0 4241 153257.75 0.4207873903328986 32 -1.2929458618164062 1 Unmodified _PPPPQPPPP_ ENSG00000090470|ENST00000204549|PDCD7;ENSG00000106078|ENST00000265136|COBL;ENSG00000131061|ENST00000375200|ZNF341;ENSG00000148143|ENST00000277225|ZNF462;ENSG00000181240|ENST00000321510|SLC25A41;ENSG00000196814|ENST00000361171|MVB12B;ENSG00000203867|ENST00000369519|RBM20;ENST00000519758.5_1_X:47078159-47081683:+|nuORF;ENST00000522234.5_1_X:47078210-47085639:+|nuORF;nc|ENSG00000106078|O75128-2|COBL;nc|ENSG00000106078|O75128-3|COBL;nc|ENSG00000106078|O75128-4|COBL;nc|ENSG00000106078|O75128-5|COBL;nc|ENSG00000106078|O75128-7|COBL;nc|ENSG00000131061|Q9BYN7-2|ZNF341;nc|ENSG00000148143|Q96JM2-3|ZNF462;nc|ENSG00000181240|Q8N5S1-2|SLC25A41;nc|ENSG00000196814|Q9H7P6-2|MVB12B;REV__ENSG00000090470|ENST00000204549|PDCD7;REV__ENSG00000106078|ENST00000265136|COBL;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000181240|ENST00000321510|SLC25A41;REV__ENSG00000196814|ENST00000361171|MVB12B;REV__ENSG00000203867|ENST00000369519|RBM20;REV__ENST00000519758.5_1_X:47078159-47081683:+|nuORF;REV__ENST00000522234.5_1_X:47078210-47085639:+|nuORF;REV__nc|ENSG00000106078|O75128-2|COBL;REV__nc|ENSG00000106078|O75128-3|COBL;REV__nc|ENSG00000106078|O75128-4|COBL;REV__nc|ENSG00000106078|O75128-5|COBL;REV__nc|ENSG00000106078|O75128-7|COBL;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000181240|Q8N5S1-2|SLC25A41;REV__nc|ENSG00000196814|Q9H7P6-2|MVB12B 32.116972079565 0.1225432171549407 1 QPKY 4 7 20.512 0.0 0.0 2.2236 0.0 0.0 388.2110870520096 0.0 388.2110870520096 0.0 9.187912377952951 0.0 0.0 0 0.4666152729074456 0.0 0.0 0.6549471895720985 QPKY 2.2236 - 84 1 2.383 96654.9 1.0 1088 3152 4241 DOHH2_400M_050219_1,4242 DOHH2_400M_050219_1,4242,PPPPQPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4243 21.875 106.0 571800.0 25 0 34489.0 + 34873 SQGFSHSQM 9 111 504.7136862485939 1007.4128195639878 2 504.7138549685478 MULTI CID FTMS 0 0 0 4241 336947.34375 0.5334027399537257 -4 0.1269607543945312 2 Unmodified _SQGFSHSQM_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 27.22323531849824 0.1848086127304535 1 {[QS]|[NT]}G{M(Oxidation (M))|F}S 5 4 33.262 0.0 0.0 3.3017 0.0 0.0 0.0 498.1795443170532 498.1795443170532 19.74977412971144 0.0 0.0 0.0 0 0.8807196863200843 0.744727494896694 0.3054621874040891 0.0 + {[QS]|[NT]}G{M(Oxidation (M))|F}S 3.3017 + + 126 + 1 2.383 52400.9 1.0 1089 3152 4241 DOHH2_400M_050219_1,4243 DOHH2_400M_050219_1,4243,SQGFSHSQM False True SQGFSHSQM 21.874633 504.713854968548 2977258.0 4241.0 ENSG00000181143|ENST00000397910|MUC16 2.977001190185547 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4244 21.881 327.0 226070.0 25 0 17968.0 + 28351 PSDPRYHEVHY 11 99 467.2178888795184 1398.631837238755 3 467.2175475955009 MULTI CID FTMS 0 0 0 4241 98313.9453125 1.0 0 0.0 3 Unmodified _PSDPRYHEVHY_ ENSG00000130305|ENST00000438747|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 17.86316937532769 0.6635724014218961 1 [PS]D{I|L} 4 8 26.532 0.0 0.0 1.897 0.0 0.0 0.0 983.4137640788518 983.4137640788518 8.484725226930543 0.0 0.0 0.0 0 0.5 1.0 0.6549471895720985 0.0 [PS]D{I|L} 1.897 - 322 1 2.383 61852.2 1.0 1090 3152 4241 DOHH2_400M_050219_1,4244 DOHH2_400M_050219_1,4244,PSDPRYHEVHY False True PSDPRYHEVHY 21.880564 467.2177 628129.0 4241.0 ENSG00000130305|ENST00000438747|NSUN5;;nc|ENSG00000130305|Q96P11|NSUN5;;nc|ENSG00000130305|Q96P11-5|NSUN5;;nc|ENSG00000130305|Q96P11-4|NSUN5 5.593444506327312 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4246 21.897 800.0 174530.0 25 0 18735.0 -1 QASWVCQCEE 10 115 648.749981605517 1295.4854102778338 2 648.7519409060478 MULTI CID FTMS 0 0 0 4245 111223.046875 0.4911587593828364 -2 0.0555667877197265 1 2 Carbamidomethyl (C) _QASWVC(Carbamidomethyl (C))QC(Carbamidomethyl (C))EE_ ENSG00000087903|ENST00000303657|RFX2;nc|ENSG00000087903|P48378-2|RFX2 8.745405648335112 0.6861838735306406 1 [QA]HDE[C(Carbamidomethyl (C))S][MT]A{M(Oxidation (M))|F} 11 -1 + 57.88 0.0 0.0 4.4678 4.4678 72.319 0.0 0.0 0.0 11.487129356975778 38.454938686987205 11.487129356975778 0.6246936830414995 0 1.8807196863200843 0.0 0.0 1.1861818737241734 [QA]HDE[C(Carbamidomethyl (C))S][MT]A{M(Oxidation (M))|F};[QA]HDE[C(Carbamidomethyl (C))S]{[{M(Oxidation (M))|F}C]|[YS]}AE;[QA]HDE[C(Carbamidomethyl (C))S]D{[MG]|[TS]}{M(Oxidation (M))|F};[QA]HDE[MD][HN]AE;[QA]HDE[C(Carbamidomethyl (C))S]NH[QA];[QA]HDE[MD]DH[QA];[QA]HDE[C(Carbamidomethyl (C))S]GGH[QA];[HD][QA]E[C(Carbamidomethyl (C))S]NH[QA];[HD][QA]E[MD]DH[QA];[HD]E[QA][C(Carbamidomethyl (C))S]NH[QA] 4.4678;4.4196;4.3068;4.2836;3.2454;3.1094;2.5407;1.1969;1.061;0.27142 -;-;-;-;-;-;-;-;-;- 228 1 2.383 105450.6 0.5099999904632568 1091 3153 4245 DOHH2_400M_050219_1,4246 DOHH2_400M_050219_1,4246,QASWVCQCEE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4247 21.9 156.0 355270.0 25 0 23807.0 + 23402 LTEASSSATY 10 104 515.2403810967938 1028.4662092603876 2 515.2405273318291 MULTI CID FTMS 0 0 0 4245 327642.15625 1.0 0 0.0 2 Unmodified _LTEASSSATY_ REV__nc|ENSG00000162913|Q96MR7-2|OBSCN-AS1;REV__nc|ENSG00000162913|Q96MR7|OBSCN-AS1 20.453626601364224 0.5043500229302764 1 TY 2 -1 24.024 0.0 0.0 2.3359 0.0 0.0 746.3443963715189 0.0 746.3443963715189 0.0 -0.7208076777034336 -0.7208076777034336 0.0 0 0.0 0.0 0.3054621874040891 0.0 TY 2.3359 + + 296 + 1 2.383 48061.8 1.0 1092 3153 4245 DOHH2_400M_050219_1,4247 DOHH2_400M_050219_1,4247,LTEASSSATY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4248 21.905 278.0 330530.0 25 0 33626.0 + 10377 FSQQIFEY 8 114 531.2494695807824 1060.4843862283649 2 531.2482177615166 MULTI CID FTMS 0 0 0 4245 134319.21875 0.764256457270635 -1 0.0201301574707031 3 Unmodified _FSQQIFEY_ REV__ENSG00000144285|ENST00000674923|SCN1A;REV__nc|ENSG00000144285|P35498-2|SCN1A;REV__nc|ENSG00000144285|P35498-3|SCN1A 34.10243960390752 0.3329570729325616 1 {M(Oxidation (M))|F}SET[VS]QTY 9 -1 + 57.642 0.0 0.0 5.4354 5.4354 77.133 0.0 0.0 0.0 39.68310920309804 14.09256854528806 14.09256854528806 1.706962271689747 0 0.805462187404089 0.0 0.4247425010840047 0.4247425010840047 {M(Oxidation (M))|F}SET[VS]QTY;{M(Oxidation (M))|F}SET[WK]TY;{M(Oxidation (M))|F}SET[VS][AG]TY;{M(Oxidation (M))|F}SE{[ET]|[MV]}[KG]TY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QQ[PS]ESE;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RP][PS]ESE;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TP]{[QN]|[E{I|L}]|[KN]}ESE;{M(Oxidation (M))|F}[WM][VS]QTY;[VS][HS][VS]TESE;{M(Oxidation (M))|F}[WM][WK]TY 5.4354;5.2745;4.1666;3.5495;3.2112;2.79;2.6688;2.5393;2.4504;2.3848 -;-;-;-;-;-;-;-;-;- 331 + 1 2.383 74835.6 1.0 1093 3153 4245 DOHH2_400M_050219_1,4248 DOHH2_400M_050219_1,4248,FSQQIFEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4249 21.919 800.0 98649.0 25 0 7021.1 + 16623 KEGPSPKVEY 10 123 567.2949395397326 1132.575326146265 2 567.2948486208916 MULTI CID FTMS 0 0 0 4245 95726.390625 1.0 0 0.0 4 Unmodified _KEGPSPKVEY_ ENSG00000099194|ENST00000370355|SCD 44.391923383255 0.1130657680819667 1 {NN|[MP]|[D{I|L}]|[EV]}[RN][KP]VEY 9 4 + 48.394 0.0 0.0 4.273 4.273 72.023 0.0 0.0 0.0 4.71217778224478 16.67276514903822 4.71217778224478 0.9640156839957824 0 0.9247425010840048 1.0969100130080565 0.4247425010840047 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}[RN][KP]VEY;{NN|[MP]|[D{I|L}]|[EV]}[RN][VP]KEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VP][RN]VEY;{NN|[MP]|[D{I|L}]|[EV]}[KP][RN]VEY;[VP]Q[Q{I|L}]EKEY;[VP]Q{[CA]|SS}[KP]VEY;{[TV]|[{I|L}S]}G[VP][RN]VEY;[VP]Q{[CA]|SS}[VP]KEY;[KP][TA][PA]EKEY;[KP]W[WP]KEY 4.273;4.1878;3.4347;3.4102;3.1298;3.0838;3.0185;2.9987;2.9478;2.729 -;-;-;-;-;-;-;-;-;- 458 1 2.383 64875.6 0.5299999713897705 1094 3153 4245 DOHH2_400M_050219_1,4249 DOHH2_400M_050219_1,4249,KEGPSPKVEY True True KEGPSPKVEY 21.91898 567.294848620892 439329.75 4245.0 ENSG00000099194|ENST00000370355|SCD 6.171980063120524 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4251 21.924 6.5 6564900.0 25 0 269240.0 + -1 EMETKQMQAF 10 80 629.7763327452645 0 629.7764770388603 PEAK CID FTMS 0 0 0 4250 8869737.0 1.0 0 0.0 1 Oxidation (M) _EM(Oxidation (M))ETKQMQAF_ REV__ENSG00000137877|ENST00000320955|SPTBN5 16.149105407346934 0.3281668441439271 1 ANQAGAEDH 9 -1 62.121 0.0 0.0 4.9399 0.0 0.0 165.08075516140804 196.07312952213127 361.1538846835393 0.0 0.0 0.0 0.0 0 1.0 0.0 0.7302046884880937 0.5 ANQAGAEDH 4.9399 - 1263 + 1 2.383 35693.3 1.0 1095 3154 4250 DOHH2_400M_050219_1,4251 DOHH2_400M_050219_1,4251,EMETKQMQAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4252 21.93 355.0 130760.0 25 0 8133.1 + 7251 EESNYELEGK 10 78 599.2671979073444 1196.5198428814888 2 599.2675048708916 MULTI CID FTMS 0 0 0 4250 172727.953125 0.2602481553122684 4 -0.1229629516601562 2 Unmodified _EESNYELEGK_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 38.61474834105838 0.1721950110283317 1 EE[NS]YE{I|L}EGK 10 0 + 66.639 0.0 0.0 5.5694 5.5694 91.031 0.0 0.0 0.0 42.80964624476746 16.057136787842637 16.057136787842637 33.531692238081845 0 0.3494850021680094 1.5228787452803376 0.75 0.4040461585048921 + + EE[NS]YE{I|L}EGK;EE[NS]YE{I|L}[TA]AA 5.5694;2.767 +;- + 200 + 1 2.383 40083.3 1.0 1096 3154 4250 DOHH2_400M_050219_1,4252 DOHH2_400M_050219_1,4252,EESNYELEGK False True False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 4254 21.946 800.0 376210.0 25 0 44159.0 38796 TVEMGTSIQA 10 189 518.7513657671841 1035.488178601168 2 519.2538329958916 MULTI CID FTMS 0 0 0 4253 149477.53125 0.8012703988016661 1 -0.0561389923095703 1 Unmodified _TVEMGTSIQA_ ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-2|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295;nc|ENSG00000166004|Q9C0D2-4|CEP295 13.90604991867851 0.6142120002215601 1 N{I|L}{M(Oxidation (M))|F} 3 9 20.177 0.0 0.0 1.9486 0.0 0.0 0.0 658.3082333431954 658.3082333431954 9.339832233135494 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N{I|L}{M(Oxidation (M))|F} 1.9486 - 125 + 1 2.383 229304.2 0.699999988079071 1097 3155 4253 DOHH2_400M_050219_1,4254 DOHH2_400M_050219_1,4254,TVEMGTSIQA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4255 21.948 37.0 2226700.0 25 0 531840.0 + 44106 YKKKSPLHY 9 71 388.5559835933064 1162.646121380119 3 388.5558044314384 MULTI CID FTMS 0 0 0 4253 694259.875 0.4896579954176986 -2 0.049591064453125 2 Unmodified _YKKKSPLHY_ REV__ENSG00000163939|ENST00000707071|PBRM1;REV__nc|ENSG00000163939|Q86U86-2|PBRM1;REV__nc|ENSG00000163939|Q86U86-3|PBRM1;REV__nc|ENSG00000163939|Q86U86-4|PBRM1;REV__nc|ENSG00000163939|Q86U86-5|PBRM1;REV__nc|ENSG00000163939|Q86U86-6|PBRM1;REV__nc|ENSG00000163939|Q86U86-7|PBRM1;REV__nc|ENSG00000163939|Q86U86-8|PBRM1;REV__nc|ENSG00000163939|Q86U86-9|PBRM1;REV__nc|ENSG00000163939|Q86U86|PBRM1 13.90604991867851 0.4602628045680013 1 VKY 3 -1 29.481 0.0 0.0 2.5357 0.0 0.0 754.4072286564493 0.0 754.4072286564493 0.0 23.767959391884546 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 VKY 2.5357 - 20 1 2.383 72633.5 1.0 1098 3155 4253 DOHH2_400M_050219_1,4255 DOHH2_400M_050219_1,4255,YKKKSPLHY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4256 21.95 120.0 654260.0 25 0 193260.0 + 24166 LYSLGRNAAL 10 96 359.8729931362841 0 359.8730346560478 PEAK CID FTMS 0 0 0 4253 303654.125 1.0 0 0.0 3 Unmodified _LYSLGRNAAL_ ENSG00000179142|ENST00000323110|CYP11B2 26.88365393820708 0.2428278298207118 1 {I|L} 1 9 6.9897 0.0 0.0 0.97386 0.0 0.0 469.578965543273 132.04575525455314 601.6247207978262 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.97386 + + 23 + 1 2.383 70254.4 1.0 1099 3155 4253 DOHH2_400M_050219_1,4256 DOHH2_400M_050219_1,4256,LYSLGRNAAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4257 21.964 800.0 253750.0 25 0 24904.0 -1 KTGVCITALK 10 134 545.8178616876609 1089.6211704421216 2 545.8184081912041 MULTI CID FTMS 0 0 0 4253 134435.9375 0.2923429980252007 -6 0.1778297424316406 4 Carbamidomethyl (C) _KTGVC(Carbamidomethyl (C))ITALK_ ENSG00000073331|ENST00000650871|ALPK1;ENST00000504745.1_1_4:113347516-113362363:+|nuORF;nc|ENSG00000073331|Q96QP1-2|ALPK1 17.11289562659939 0.5604042439455784 1 KTT[{I|L}P][WP]K 8 -1 28.963 0.0 0.0 2.658 0.0 0.0 120.05988619923968 0.0 120.05988619923968 0.0 16.15865011156764 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.6861818737241735 KTT[{I|L}P][WP]K 2.658 - 414 + 1 2.383 157422.5 0.6000000238418579 1100 3155 4253 DOHH2_400M_050219_1,4257 DOHH2_400M_050219_1,4257,KTGVCITALK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4258 21.978 800.0 268910.0 25 0 87206.0 + + 45236 REAERLVKY 9 106 582.3302025031346 1162.6458520730691 2 582.3300659060478 MULTI CID FTMS 0 0 0 4253 125010.8984375 0.432334078432182 -2 0.049591064453125 5 Unmodified _YRRPRPRY_ nc|ENSG00000147123|Q9NX14-2|NDUFB11;ENSG00000147123|ENST00000377811|NDUFB11 24.67388899826682 0.525179942228231 1 [VG]{[VA]|[{I|L}G]}V{I|L}[WE]KY 10 -1 + 42.905 0.0 0.0 3.6903 3.6903 76.676 0.0 0.0 0.0 20.51415913489059 13.037275116073342 13.037275116073342 6.532125137753432 0 0.5 2.0 0.0 0.0 [VG]{[VA]|[{I|L}G]}V{I|L}[WE]KY;[VG][R{I|L}]{I|L}[WE]KY;[TP]KV{I|L}[WE]KY;{[QV]|[N{I|L}]|[RA]|[KV]}[HA]H[RP]RY 3.6903;3.1284;2.8795;0.99564 -;-;-;- 183 + 1 2.383 162599.3 0.5899999737739563 1101 3155 4253 DOHH2_400M_050219_1,4258 DOHH2_400M_050219_1,4258,YRRPRPRY False False REAERLVKY 21.97782 582.330065906048 1199471.0 4253.0 nc|ENSG00000147123|Q9NX14-2|NDUFB11;;ENSG00000147123|ENST00000377811|NDUFB11 5.19074805577596 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4259 21.986 481.0 200270.0 25 0 11781.0 + 754 AEQQQQQMY 9 131 577.2511358954928 1152.4877188577857 2 577.2511474490166 MULTI CID FTMS 0 0 0 4253 110067.6953125 0.8833975315070165 -1 0.0111732482910156 6 Unmodified _AEQQQQQMY_ ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071|PRDM15 53.832793166522166 0.0319663582346103 1 [AG]Q{[CP]|[EA]}QQQMY 10 3 + 41.652 0.0 0.0 3.6141 3.6141 73.583 0.0 0.0 0.0 2.1510495975797284 6.363781092484686 2.1510495975797284 3.4948500216800937 0 0.7429928190999391 1.5228787452803376 0.25 1.385151878060192 [AG]Q{[CP]|[EA]}QQQMY;[AG]QQ{[CP]|[EA]}QQMY;[AG]AEQQQQMY;[AG]AG{[CP]|[EA]}QQQMY;{[CP]|[EA]}QQQQQMY;QQ{[CP]|[EA]}QQQMY;[AG]Q{[CP]|[EA]}QQ[AG]MY;[AG]Q{[CP]|[EA]}Q[AG]QMY;[AG]Q{[CP]|[EA]}[AG]QQMY;DDD{I|L}K[HT]{M(Oxidation (M))|F}Y 3.6141;3.3108;3.3009;2.9778;2.9269;2.8732;2.8189;2.8189;2.8189;2.7322 -;-;-;-;+;-;-;-;-;- + 1811 1 2.383 77290.0 1.0 1102 3155 4253 DOHH2_400M_050219_1,4259 DOHH2_400M_050219_1,4259,AEQQQQQMY True True AEQQQQQMY 21.986338 577.251147449017 765542.5625 4253.0 nc|ENSG00000141956|P57071-3|PRDM15;;nc|ENSG00000141956|P57071-2|PRDM15;;nc|ENSG00000141956|P57071|PRDM15;;ENSG00000141956|ENST00000398548|PRDM15 4.322123289108276 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4261 21.991 25.0 1874800.0 25 0 245530.0 + 30514 REIESSPQY 9 59 554.7667860874072 1107.5190192416144 2 554.7675048708916 MULTI CID FTMS 0 0 0 4260 2145090.25 1.0 0 0.0 1 Unmodified _REIESSPQY_ ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ENST00000564284.1_1_16:28841101-28842119:+|nuORF;ENST00000570284.1_1_16:28840745-28842349:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 43.77239144664712 0.0547478964384323 1 [YE]P[KP]SPQY 9 4 + 45.436 0.0 0.0 4.1025 4.1025 86.213 0.0 0.0 0.0 0.7378621416091846 34.97810928665125 0.7378621416091846 45.435684192258 0 1.1237125054200234 0.0 0.805462187404089 0.0 [YE]P[KP]SPQY 4.1025 - 90 1 2.383 44969.2 1.0 1103 3156 4260 DOHH2_400M_050219_1,4261 DOHH2_400M_050219_1,4261,REIESSPQY True True REIESSPQY 21.991055 554.767504870892 25541868.0 4260.0 ENST00000564284.1_1_16:28841101-28842119:+|nuORF;;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;;ENST00000570284.1_1_16:28840745-28842349:+|nuORF;;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;;ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;;ENSG00000168488|ENST00000336783|ATXN2L;;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;;nc|ENSG00000168488|Q8WWM7-5|ATXN2L 8.284724394480387 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4262 21.993 59.0 531690.0 25 0 47220.0 + + -1 STDTSGYGQSSY 12 74 626.7520287712277 1251.4895046092554 2 626.7526733279228 MULTI CID FTMS 0 0 0 4260 849921.25 0.3582812205411538 4 -0.1226119995117187 2 Oxidation (M) _STEM(Oxidation (M))RMYDGF_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 10.823927491677226 0.6659270209832991 1 SSY 3 -1 25.56 0.0 0.0 2.0423 0.0 0.0 896.3508765348398 0.0 896.3508765348398 0.0 11.307196863200843 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 SSY 2.0423 - 162 + 1 2.383 31021.9 1.0 1104 3156 4260 DOHH2_400M_050219_1,4262 DOHH2_400M_050219_1,4262,STEMRMYDGF False False STDTSGYGQSSY 21.992553 626.752673327923 26582706.0 4260.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 5.497800191243489 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4264 21.997 45.0 1778200.0 25 0 397240.0 + 8121 EPIRRQSL 8 75 499.7908397951609 997.5671266571218 2 499.7908813357353 MULTI CID FTMS 0 0 0 4263 1086083.75 0.8889534362644572 1 -0.0494098663330078 1 Unmodified _EPIRRQSL_ ENSG00000118454|ENST00000370944|ANKRD13C;nc|ENSG00000118454|Q8N6S4-2|ANKRD13C 14.838274106304384 0.6917062315640577 1 {I|L}E 2 7 21.766 0.0 0.0 2.1819 0.0 0.0 0.0 752.4174289754174 752.4174289754174 2.302046884880937 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}E 2.1819 - 8 + 1 2.383 65773.7 1.0 1105 3157 4263 DOHH2_400M_050219_1,4264 DOHH2_400M_050219_1,4264,EPIRRQSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4265 22.0 121.0 824470.0 25 0 78939.0 28326 PSAACDEY 8 114 428.161666909162 854.308780885124 2 428.1609985232353 MULTI CID FTMS 0 0 0 4263 457519.3125 0.3094597863414105 -3 0.0735530853271484 2 Unmodified _PSAACDEY_ ENSG00000113504|ENST00000264930|SLC12A7 19.438996006549623 0.6237395211498085 1 {[YC]|[HE]}DYEY 6 5 + 47.0 0.0 0.0 5.5015 5.5015 76.38 0.0 0.0 0.0 0.9319560784774694 16.197887582883936 0.9319560784774694 0.9319560784774694 0 0.4247425010840047 0.0 1.0356668758921828 0.0 {[YC]|[HE]}DYEY;{[WN]|[YH]}EDEY;[YE]HDEY;{[YC]|[HE]}YDEY;{[ES]|[DT]|[{I|L}C]}[NP][MD]Y;[PG]QQ[C(Carbamidomethyl (C))C]Y 5.5015;5.3924;4.6669;4.3198;0.27806;0.047579 -;-;-;-;-;- 106 1 2.383 81431.3 1.0 1106 3157 4263 DOHH2_400M_050219_1,4265 DOHH2_400M_050219_1,4265,PSAACDEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4266 22.014 800.0 255020.0 25 0 65692.0 -1 DMKSYLCYKF 10 121 685.8089535822191 1369.6033542312382 2 685.8087646365166 MULTI CID FTMS 0 0 0 4263 222585.890625 1.0 0 0.0 3 Carbamidomethyl (C),Oxidation (M) _DM(Oxidation (M))KSYLC(Carbamidomethyl (C))YKF_ ENST00000370986.8_1_1:68153878-68153992:+|nuORF 16.149105407346934 0.5765757077271437 1 [C(Carbamidomethyl (C))C]KMY{[WN]|[YH]}{I|L}PR 10 -1 + 20.628 0.0 0.0 1.5061 1.5061 77.961 0.0 0.0 0.0 3.6909198105904366 0.9561258516839182 0.9561258516839182 11.161613948555768 0 0.1989700043360188 0.0 0.0 1.6576960356474642 [C(Carbamidomethyl (C))C]KMY{[WN]|[YH]}{I|L}PR;[RH]D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[WQ]V[HV];{[CP]|[EA]}VD[RP]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DK{M(Oxidation (M))|F};[C(Carbamidomethyl (C))C]KQP{[WN]|[YH]}[QA][HV];[C(Carbamidomethyl (C))C]KQP{[{M(Oxidation (M))|F}H]|[RQ]}[YC(Carbamidomethyl (C))]K 1.5061;0.69119;0.665;0.63862;0.34236 -;-;-;-;- 572 + 1 2.383 146039.9 0.7799999713897705 1107 3157 4263 DOHH2_400M_050219_1,4266 DOHH2_400M_050219_1,4266,DMKSYLCYKF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4267 22.021 405.0 219500.0 25 0 19650.0 + 29151 QFHEKTSAL 9 122 530.7740365320335 1059.533520130867 2 530.7754394412041 MULTI CID FTMS 0 0 0 4263 119437.8984375 1.0 0 0.0 4 Unmodified _QFHEKTSAL_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 24.020572477871973 0.2255576514309169 1 ESK 3 7 26.682 0.0 0.0 2.5183 0.0 0.0 697.3392201154312 0.0 697.3392201154312 0.0 -8.08252780812196 -8.08252780812196 0.0 0 0.0 0.0 0.3494850021680094 0.0 ESK 2.5183 - 342 1 2.383 70693.5 1.0 1108 3157 4263 DOHH2_400M_050219_1,4267 DOHH2_400M_050219_1,4267,QFHEKTSAL False True QFHEKTSAL 22.020865 530.775439441204 493508.46875 4263.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 2.7172906001408896 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4268 22.024 141.0 540160.0 25 0 48123.0 + 10222 FQKLQQLE 8 106 517.2856139466651 0 517.2870361208916 PEAK CID FTMS 0 0 0 4263 356801.15625 0.2621556084669448 -12 0.3327808380126953 5 Unmodified _FQKLQQLE_ REV__ENSG00000050820|ENST00000162330|BCAR1;REV__ENST00000566982.1_1_16:75263411-75272069:-|nuORF;REV__nc|ENSG00000050820|P56945-2|BCAR1;REV__nc|ENSG00000050820|P56945-3|BCAR1;REV__nc|ENSG00000050820|P56945-4|BCAR1;REV__nc|ENSG00000050820|P56945-5|BCAR1;REV__nc|ENSG00000050820|P56945-6|BCAR1;REV__nc|ENSG00000050820|P56945-7|BCAR1;REV__nc|ENSG00000050820|P56945-8|BCAR1 12.531546534597751 0.5131024102181418 1 T 1 -1 10.485 0.0 0.0 1.0154 0.0 0.0 293.17015259860506 635.3186129205686 928.4887655191736 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 T 1.0154 - 9 + 1 2.383 62618.2 1.0 1109 3157 4263 DOHH2_400M_050219_1,4268 DOHH2_400M_050219_1,4268,FQKLQQLE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4269 22.028 232.0 266320.0 25 0 79817.0 -1 0 82 540.2316729711632 539.2243965045632 1 540.2322875857353 MULTI CID FTMS 0 0 0 4263 188884.96875 0.7567458440957971 3 -0.1163711547851562 6 1 {[ET]|[MV]}QY 4 -1 {[ET]|[MV]}Q + + 12.218 5.5633 1.5533 2.2659 2.2659 49.148 0.0 0.0 0.0 0.0 -4.313929935651668 -4.313929935651668 0.0 0 0.0 0.0 0.0 0.0 {[ET]|[MV]}QY 2.2659 - 14 + 1 2.383 53714.1 1.0 1110 3157 4263 DOHH2_400M_050219_1,4269 DOHH2_400M_050219_1,4269, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4270 22.042 800.0 127540.0 25 0 40197.0 -1 0 54 1124.440298495213 3370.2990660858395 3 1124.775561511517 MULTI CID FTMS 0 0 0 4263 174643.453125 0.4063245941818401 -4 0.1119709014892578 7 1 {M(Oxidation (M))|F}C(Carbamidomethyl (C))G{M(Oxidation (M))|F}YGYW 8 -1 25.47 0.0 0.0 0.75573 0.0 0.0 1182.403266380564 1104.4673193859292 2286.870585766493 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C))G{M(Oxidation (M))|F}YGYW 0.75573 - 115 + 1 2.383 93957.6 0.5600000023841858 1111 3157 4263 DOHH2_400M_050219_1,4270 DOHH2_400M_050219_1,4270, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4272 22.047 68.0 694200.0 25 0 109230.0 + 6556 EALPKQSV 8 75 436.2479957035959 870.4814384739918 2 436.2478515505791 MULTI CID FTMS 0 0 0 4271 696297.75 0.3957168049757159 4 -0.1286602020263672 1 Unmodified _EALPKQSV_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 48.345845343767074 0.1470278396477103 1 {[CP]|[EA]}{I|L}PKQSV 8 0 {[CP]|[EA]}{I|L} + + 25.724 8.9348 2.8531 2.9551 2.9551 50.35 0.0 0.0 0.0 0.0 1.2029720289687198 0.0 0.0 0 0.0 0.0 0.805462187404089 0.3054621874040891 + + {[CP]|[EA]}{I|L}PKQSV 2.9551 + + 100 + 1 2.383 43731.5 1.0 1112 3158 4271 DOHH2_400M_050219_1,4272 DOHH2_400M_050219_1,4272,EALPKQSV False True EALPKQSV 22.046696 436.247851550579 8407520.0 4271.0 nc|ENSG00000145741|P20290-2|BTF3;;ENSG00000145741|ENST00000380591|BTF3 5.286205927530925 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4273 22.051 219.0 228050.0 25 0 22593.0 + 35566 STQMTITTQK 10 88 569.7917062688438 1137.5688596044874 2 569.7924682497978 MULTI CID FTMS 0 0 0 4271 193369.09375 0.2595759302503038 3 -0.0707836151123046 2 Unmodified _STQMTITTQK_ ENSG00000181143|ENST00000397910|MUC16 53.31671820480216 0.0606844387689228 1 {[MG]|[TS]}QMT{I|L}TTQK 10 0 + 61.265 0.0 0.0 5.3856 5.3856 84.64 0.0 0.0 0.0 5.764837301042718 11.171918312155029 5.764837301042718 9.164539485499247 0 0.805462187404089 0.0 0.5 0.9105162882498864 + + {[MG]|[TS]}QMT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}TT[AG]K;{[MG]|[TS]}[AG]MT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}T[KS]AA;{[MG]|[TS]}[AG]MT{I|L}TT[AG]K;{[MG]|[TS]}QMT{I|L}[YV]VP;{[MG]|[TS]}[AG]MT{I|L}T[KS]AA;{[MG]|[TS]}[AG]MT{I|L}[YV]VP 5.3856;4.58;4.58;4.4035;3.7775;3.7312;3.6011;2.5909 +;-;-;-;-;-;-;- + 191 + 1 2.383 46205.8 1.0 1113 3158 4271 DOHH2_400M_050219_1,4273 DOHH2_400M_050219_1,4273,STQMTITTQK True True STQMTITTQK 22.05085 569.792468249798 7407030.0 4271.0 ENSG00000181143|ENST00000397910|MUC16 9.440549850463867 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4274 22.061 606.0 168540.0 25 0 11981.0 + 36221 SVYPKKEL 8 126 482.2792375958576 962.5439222585152 2 482.2794372439384 MULTI CID FTMS 0 0 0 4271 105374.21875 1.0 0 0.0 3 Unmodified _SVYPKKEL_ ENSG00000004866|ENST00000323984|ST7;ENSG00000007341|ENST00000358039|ST7L;ENST00000464020.1_1_7:116859112-116863031:+|nuORF;nc|ENSG00000004866|Q9NRC1-2|ST7;nc|ENSG00000004866|Q9NRC1-3|ST7;nc|ENSG00000004866|Q9NRC1-4|ST7;nc|ENSG00000004866|Q9NRC1-5|ST7;nc|ENSG00000004866|Q9NRC1-6|ST7;nc|ENSG00000004866|Q9NRC1|ST7;nc|ENSG00000007341|Q8TDW4-2|ST7L;nc|ENSG00000007341|Q8TDW4-3|ST7L;nc|ENSG00000007341|Q8TDW4-4|ST7L;nc|ENSG00000007341|Q8TDW4-5|ST7L;nc|ENSG00000007341|Q8TDW4-6|ST7L;nc|ENSG00000007341|Q8TDW4-7|ST7L 19.256988751693697 0.6264283240490721 1 [VS]YP 4 4 39.715 0.0 0.0 4.126 0.0 0.0 0.0 513.3035372369749 513.3035372369749 26.2198223936527 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + [VS]YP 4.126 + + 197 + 1 2.383 81832.2 1.0 1114 3158 4271 DOHH2_400M_050219_1,4274 DOHH2_400M_050219_1,4274,SVYPKKEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4275 22.066 232.0 378520.0 25 0 61810.0 13786 HSLPEYQARE 10 101 410.5348637325456 1228.5827617978366 3 410.5352661013603 MULTI CID FTMS 0 0 0 4271 103925.9765625 0.4245545146121479 -3 0.1117897033691406 4 Unmodified _HSLPEYQARE_ ENSG00000124134|ENST00000537075|KCNS1 10.073929032068715 0.6785112666868882 1 [HS]{I|L}{I|L}APHYYE 10 6 + 26.206 0.0 0.0 2.133 2.133 71.545 0.0 0.0 0.0 3.2468057659447496 10.669467896306127 3.2468057659447496 4.426806100157556 0 0.0 0.8239087409443188 0.2614393726401688 0.0 [HS]{I|L}{I|L}APHYYE;{M(Oxidation (M))|F}YYHPA[R{I|L}]Y 2.133;1.7727 -;- 64 1 2.383 78089.3 1.0 1115 3158 4271 DOHH2_400M_050219_1,4275 DOHH2_400M_050219_1,4275,HSLPEYQARE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4276 22.079 793.0 147340.0 25 0 9904.0 + 799 AESPAGHSF 9 141 451.7037879525353 901.3930229718708 2 451.7036010622978 MULTI CID FTMS 0 0 0 4271 85410.9609375 0.0439933188892546 -10 0.3084716796875 5 Unmodified _AESPAGHSF_ ENSG00000136699|ENST00000680298|SMPD4;ENST00000438378.2_1_2:132275414-132277996:+|nuORF;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;nc|ENSG00000136699|Q9NXE4-10|SMPD4;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4-5|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;nc|ENSG00000136699|Q9NXE4-7|SMPD4;nc|ENSG00000136699|Q9NXE4-8|SMPD4;nc|ENSG00000136699|Q9NXE4-9|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4 81.61307344734483 0.0171259190214613 1 {[CP]|[EA]}SPQHS{M(Oxidation (M))|F} 8 2 + 54.44 0.0 0.0 6.0395 6.0395 77.467 0.0 0.0 0.0 6.989700043360188 11.298997828790633 6.989700043360188 0.2506781661521273 0 1.0 0.0 1.4876954943324543 0.0 {[CP]|[EA]}SPQHS{M(Oxidation (M))|F};{[CP]|[EA]}SPAGHS{M(Oxidation (M))|F};{[CP]|[EA]}SPQHAY;{[CP]|[EA]}SPAGHAY;{[CP]|[EA]}SPQHYA;{[CP]|[EA]}SPAGHYA;{[CP]|[EA]}SP[NP]C(Carbamidomethyl (C))K;{[CP]|[EA]}SPA[HQ]Y;{[CP]|[EA]}SP[NP][CG]K;{[CP]|[EA]}S[YN]RY 6.0395;6.0117;4.786;4.5028;4.1538;3.8706;3.5522;3.2351;2.5247;2.524 -;+;-;-;-;-;-;-;-;- + 614 + 1 2.383 92838.3 1.0 1116 3158 4271 DOHH2_400M_050219_1,4276 DOHH2_400M_050219_1,4276,AESPAGHSF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4278 22.096 800.0 96370.0 25 0 7599.2 3434 CAKAYRPGVY 10 129 564.2853851152678 0 564.2852050662041 PEAK CID FTMS 0 0 0 4277 108155.4296875 0.907680984037505 2 -0.0331878662109375 1 Unmodified _CAKAYRPGVY_ ENSG00000184012|ENST00000332149|TMPRSS2;nc|ENSG00000184012|O15393-2|TMPRSS2 6.723162845929126 0.3961065659209837 1 KDD 3 9 10.177 0.0 0.0 0.9034 0.0 0.0 169.06764415456047 596.3172701471311 765.3849143016917 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 KDD 0.9034 - 40 + 1 2.383 63974.6 0.5099999904632568 1117 3159 4277 DOHH2_400M_050219_1,4278 DOHH2_400M_050219_1,4278,CAKAYRPGVY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4279 22.102 356.0 274060.0 25 0 49506.0 13868 HVKGAQGI 8 112 405.2359540243951 808.4573551155902 2 405.2357360720634 MULTI CID FTMS 0 0 0 4277 91909.078125 0.9748324630765808 -1 0.0375957489013671 2 Unmodified _HVKGAQGI_ ENSG00000179151|ENST00000315127|EDC3 8.593279151180031 0.7721714526254883 1 N{I|L} 2 7 21.86 0.0 0.0 2.704 0.0 0.0 563.3355580060562 0.0 563.3355580060562 0.0 10.07773182129603 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 N{I|L} 2.704 - 53 1 2.383 81131.0 1.0 1118 3159 4277 DOHH2_400M_050219_1,4279 DOHH2_400M_050219_1,4279,HVKGAQGI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4280 22.109 365.0 436200.0 25 0 78573.0 -1 0 100 785.8600363370415 3139.411039481766 4 786.1107055544853 MULTI CID FTMS 0 0 0 4277 270599.5625 0.8683086194751052 -4 0.1493854522705078 3 1 V[WR]GE{[SA]|[TG]}G 8 -1 23.461 0.0 0.0 0.7473 0.0 0.0 978.4278877330912 1315.564974960308 2293.9928626934 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 V[WR]GE{[SA]|[TG]}G 0.7473 - 243 + 1 2.383 114429.1 1.0 1119 3159 4277 DOHH2_400M_050219_1,4280 DOHH2_400M_050219_1,4280, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4283 22.129 800.0 148210.0 25 0 11528.0 7193 EEQKTSGIM 9 146 511.7458405807792 0 511.7449828982353 PEAK CID FTMS 0 0 0 4282 86093.09375 0.5876511893521486 -2 0.0331878662109375 1 Unmodified _EEQKTSGIM_ ENSG00000178449|ENST00000550487|COX14 25.399314129420983 0.152124705672316 1 A{I|L}KK 4 8 11.542 0.0 0.0 1.13 0.0 0.0 112.93080928842524 465.2104586236938 578.141267912119 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}KK 1.13 - 195 + 1 2.383 93235.2 0.6100000143051147 1120 3161 4282 DOHH2_400M_050219_1,4283 DOHH2_400M_050219_1,4283,EEQKTSGIM False True ALLKKHEAL 22.129067 511.744982898235 188168.59375 4282.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 3.3028412659962973 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4284 22.143 800.0 149540.0 25 0 7122.7 + 7226 EERGFDKAY 9 125 557.7626077954966 1113.510662657793 2 557.7624389529228 MULTI CID FTMS 0 0 0 4282 85035.0625 0.2709679565132359 -4 0.1201934814453125 2 Unmodified _EERGFDKAY_ ENSG00000175334|ENST00000312175|BANF1 47.74868867922204 0.0453060283459952 1 DKAY 4 5 50.477 0.0 0.0 4.5332 0.0 0.0 618.2751397002942 0.0 618.2751397002942 0.0 23.58803781186345 0.0 0.0 0 1.0 0.0 1.305462187404089 0.0 + DKAY 4.5332 + + 326 1 2.383 92576.9 0.5899999737739563 1121 3161 4282 DOHH2_400M_050219_1,4284 DOHH2_400M_050219_1,4284,EERGFDKAY True True EERGFDKAY 22.142902 557.762438952923 1461354.375 4282.0 ENSG00000175334|ENST00000312175|BANF1 5.519792874654134 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4285 22.157 800.0 56304.0 25 0 2380.2 + 26302 NQYEMQELAF 10 89 636.7833104506341 1271.552067968068 2 636.7832519412041 MULTI CID FTMS 0 0 0 4282 85775.2265625 1.0 0 0.0 3 Unmodified _NQYEMQELAF_ REV__ENSG00000071909|ENST00000408978|MYO3B;REV__ENST00000409940.6_1_2:171034716-171376051:+|nuORF;REV__ENST00000438642.6_1_2:171034716-171400468:+|nuORF;REV__ENST00000602629.1_1_2:171225816-171400468:+|nuORF;REV__nc|ENSG00000071909|Q8WXR4-2|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-3|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-4|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-5|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-6|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-7|MYO3B 14.838274106304384 0.5985701837916485 1 [HV]NQQAE{[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F} 11 -1 + 35.883 0.0 0.0 2.822 2.822 71.677 0.0 0.0 0.0 16.401928844408754 1.0132004799686172 1.0132004799686172 3.487672155882109 0 0.4247425010840047 0.0 0.0 0.4247425010840047 [HV]NQQAE{[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F};[HD]{[NV]|[RG]}EAQQNA{M(Oxidation (M))|F};[HV]NQ{[NV]|[RG]}D{[WN]|[YH]}{M(Oxidation (M))|F};[HV]NQ{[NV]|[RG]}D{[{M(Oxidation (M))|F}H]|[RQ]}Y;[HV]NQ[RD]G{[WN]|[YH]}{M(Oxidation (M))|F};[HV]NQ[RD]G{[{M(Oxidation (M))|F}H]|[RQ]}Y;{[NV]|[RG]}[HD]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[W{M(Oxidation (M))|F}]QNA{M(Oxidation (M))|F};[AG][W{M(Oxidation (M))|F}]{[CT]|[{M(Oxidation (M))|F}G]}QQNA{M(Oxidation (M))|F};[HV]N[AG]QAE{[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F} 2.822;2.5477;2.3891;2.3891;2.2909;2.2909;2.2784;2.1524;2.1399;2.1041 -;-;-;-;-;-;-;-;-;- 568 + 1 2.383 41201.9 0.5699999928474426 1122 3161 4282 DOHH2_400M_050219_1,4285 DOHH2_400M_050219_1,4285,NQYEMQELAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4286 22.171 800.0 119190.0 25 0 11845.0 + + 6933 EEQSHPARLY 10 109 615.3022997988913 1228.5900466645826 2 615.2990600466728 MULTI CID FTMS 0 0 0 4282 154321.140625 0.9774017690021064 -5 0.126434326171875 4 Unmodified _EEGALRETEPV_ ENST00000461020.5_1_3:50385039-50386041:-|nuORF;ENST00000467294.1_1_3:50385039-50385481:-|nuORF;ENST00000487632.5_1_3:50385039-50386411:-|nuORF;ENSG00000114388|ENST00000232501|NPRL2 24.99096001346401 0.505407273373304 1 EEQSHPAR{I|L}Y 10 -1 + 61.441 0.0 0.0 5.001 5.001 83.178 0.0 0.0 0.0 44.22298858191454 11.409372375139782 11.409372375139782 9.16453948549924 0 1.2614393726401687 1.3979400086720375 0.0 0.4247425010840047 EEQSHPAR{I|L}Y;EE[AG]SHPAR{I|L}Y;EEQSHPA[{I|L}V]GY;[HS]{I|L}{I|L}APHSQ[HC];EE[AG]SHPA[{I|L}V]GY;EEQ[KT]{[QV]|[N{I|L}]|[RA]|[KV]}Q[HC];EEGA[KT]{[QV]|[N{I|L}]|[RA]|[KV]}Q[HC];[AG]EE[KT]{[QV]|[N{I|L}]|[RA]|[KV]}Q[HC];[HS]{I|L}{I|L}APHS[AG][HC];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[KT]{[QV]|[N{I|L}]|[RA]|[KV]}Q[HC] 5.001;4.255;3.8974;3.0378;2.8087;2.7522;2.7185;2.2381;1.9491;1.892 -;-;-;-;-;-;-;-;-;- 218 + 1 2.383 74628.2 0.7099999785423279 1123 3161 4282 DOHH2_400M_050219_1,4286 DOHH2_400M_050219_1,4286,EEGALRETEPV False False EEQSHPARLY 22.170572 615.299060046673 2040938.625 4282.0 ENST00000461020.5_1_3:50385039-50386041:-|nuORF;;ENST00000467294.1_1_3:50385039-50385481:-|nuORF;;ENST00000487632.5_1_3:50385039-50386411:-|nuORF;;ENSG00000114388|ENST00000232501|NPRL2 5.263898054758708 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4289 22.179 61.0 534890.0 25 0 28426.0 + -1 CLCFAPCIAF 10 72 629.7763327452645 0 629.7764160037041 PEAK CID FTMS 0 0 0 4288 660703.375 0.0744896241004665 9 -0.5355930328369141 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 12.531546534597751 0.3556095723513364 1 QNQAEDH 7 -1 44.997 0.0 0.0 3.5782 0.0 0.0 236.11633266691007 196.0730074518188 432.18934011872886 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.3494850021680094 QNQAEDH 3.5782 - 454 + 1 2.383 30673.6 1.0 1124 3163 4288 DOHH2_400M_050219_1,4289 DOHH2_400M_050219_1,4289,CLCFAPCIAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4290 22.193 800.0 64532.0 25 0 5526.1 -1 0 48 1047.4772220764337 3139.4098368295013 3 1047.811816394329 MULTI CID FTMS 0 0 0 4288 82464.59375 1.0 0 0.0 2 1 A 1 -1 6.9897 0.0 0.0 0.22264 0.0 0.0 2546.21172999532 519.1456392877561 3065.3573692830764 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.22264 - 14 + 1 2.383 41506.9 0.4399999976158142 1125 3163 4288 DOHH2_400M_050219_1,4290 DOHH2_400M_050219_1,4290, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4291 22.2 348.0 157110.0 25 0 17117.0 + 38483 TSDTVQHGAVY 11 84 589.2803025382867 1176.5460521433731 2 589.2800781130791 MULTI CID FTMS 0 0 0 4288 105915.953125 0.913044579243945 -1 0.0040206909179687 3 Unmodified _TSDTVQHGAVY_ ENSG00000143751|ENST00000272091|SDE2 19.361941925380144 0.6323962752489956 1 VY 2 9 25.969 0.0 0.0 2.2072 0.0 0.0 896.4025412564578 0.0 896.4025412564578 0.0 9.771212547196626 0.0 0.0 0 0.5 0.0 0.0 0.0 + VY 2.2072 + + 72 + 1 2.383 46701.1 1.0 1126 3163 4288 DOHH2_400M_050219_1,4291 DOHH2_400M_050219_1,4291,TSDTVQHGAVY False True TSDTVQHGAVY 22.199535 589.280078113079 618363.0625 4288.0 ENSG00000143751|ENST00000272091|SDE2 6.802825768788655 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4292 22.213 800.0 154700.0 25 0 15989.0 -1 0 65 644.7779005225385 2575.082496223754 4 645.0287963747978 MULTI CID FTMS 0 0 0 4288 64780.5703125 0.1104775403145994 -5 0.1326808929443359 4 1 D[RD]E 4 -1 17.747 0.0 0.0 0.6892 0.0 0.0 1731.7175781343078 325.15339075260005 2056.870968886908 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.3807196863200844 D[RD]E 0.6892 - 19 + 1 2.383 96554.1 0.5 1127 3163 4288 DOHH2_400M_050219_1,4292 DOHH2_400M_050219_1,4292, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4294 22.219 179.0 397110.0 25 0 39783.0 -1 KTGVCITALK 10 83 545.8178616876609 1089.6211704421216 2 545.8181030154228 MULTI CID FTMS 0 0 0 4293 244749.703125 0.5322301708004257 3 -0.1424922943115234 1 Carbamidomethyl (C) _KTGVC(Carbamidomethyl (C))ITALK_ ENSG00000073331|ENST00000650871|ALPK1;ENST00000504745.1_1_4:113347516-113362363:+|nuORF;nc|ENSG00000073331|Q96QP1-2|ALPK1 8.745405648335112 0.6861838735306406 1 K 1 -1 14.626 0.0 0.0 1.3423 0.0 0.0 943.5156844575498 0.0 943.5156844575498 0.0 1.909503439610028 0.0 0.0 0 0.0 0.0 0.0 0.1861818737241735 K 1.3423 + + 39 + 1 2.383 58717.9 1.0 1128 3164 4293 DOHH2_400M_050219_1,4294 DOHH2_400M_050219_1,4294,KTGVCITALK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4295 22.231 665.0 202160.0 25 0 12134.0 + 11258 GESSSRLGY 9 141 478.227857271172 954.441161609144 2 478.2282897830009 MULTI CID FTMS 0 0 0 4293 100460.4609375 0.5519296167292252 -1 0.0387802124023437 2 Unmodified _GESSSRLGY_ ENSG00000106948|ENST00000374088|AKNA;nc|ENSG00000106948|Q7Z591-2|AKNA;nc|ENSG00000106948|Q7Z591-3|AKNA;nc|ENSG00000106948|Q7Z591-6|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA 38.17557092003332 0.0854718145212029 1 {[DA]|[EG]}SSSR{I|L}GY 9 0 + 56.309 0.0 0.0 5.8997 5.8997 92.415 0.0 0.0 0.0 34.882287586051106 10.991531334132889 10.991531334132889 37.13538040330974 0 1.1237125054200234 2.0 0.0 0.0 + + {[DA]|[EG]}SSSR{I|L}GY;W{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}R{I|L}GY 5.8997;2.0089 +;- + 129 + 1 2.383 108067.9 1.0 1129 3164 4293 DOHH2_400M_050219_1,4295 DOHH2_400M_050219_1,4295,GESSSRLGY True True GESSSRLGY 22.230964 478.228289783001 906234.625 4293.0 nc|ENSG00000106948|Q7Z591-6|AKNA;;nc|ENSG00000106948|Q7Z591-7|AKNA;;nc|ENSG00000106948|Q7Z591-2|AKNA;;ENSG00000106948|ENST00000374088|AKNA;;nc|ENSG00000106948|Q7Z591-3|AKNA 5.248240311940511 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4296 22.245 800.0 167890.0 25 0 18285.0 + 42173 VSDPSSPQY 9 65 979.4370940984016 978.4298176318016 1 981.442919909954 MULTI CID FTMS 0 0 0 4293 159452.453125 0.8650129888117452 2 -0.0944156646728515 3 Unmodified _VSDPSSPQY_ ENSG00000166340|ENST00000299427|TPP1;ENST00000428886.6_1_11:6638445-6640631:-|nuORF;ENST00000524903.1_1_11:6639992-6640524:-|nuORF;ENST00000531754.1_1_11:6639992-6640658:-|nuORF 24.020572477871973 0.2255576514309169 1 DWSP[YQ] 6 4 27.797 0.0 0.0 2.841 0.0 0.0 184.09602964527647 0.0 184.09602964527647 0.0 17.619478172486467 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.6861818737241735 DWSP[YQ] 2.841 - 377 + 1 2.383 92747.5 0.550000011920929 1130 3164 4293 DOHH2_400M_050219_1,4296 DOHH2_400M_050219_1,4296,VSDPSSPQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4297 22.259 800.0 177940.0 25 0 11725.0 -1 0 73 884.8151030601198 4419.039132967599 5 885.2180663943291 MULTI CID FTMS 0 0 0 4293 58669.65234375 0.4425931673284795 -2 0.0428009033203125 4 1 ASAAY 5 -1 34.821 0.0 0.0 0.78797 0.0 0.0 3614.714256113886 338.0981844537719 3952.812440567658 0.0 0.0 0.0 0.0 0 2.0 0.0 0.4247425010840047 0.0 ASAAY 0.78797 - 54 + 1 2.383 103598.6 0.3899999856948852 1131 3164 4293 DOHH2_400M_050219_1,4297 DOHH2_400M_050219_1,4297, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4299 22.264 79.0 869000.0 25 0 79410.0 28327 PSAACDEY 8 94 428.161666909162 854.308780885124 2 428.1615783572197 MULTI CID FTMS 0 0 0 4298 587555.875 0.3974147332658018 5 -0.3240127563476562 1 Unmodified _PSAACDEY_ ENSG00000113504|ENST00000264930|SLC12A7 13.50788311687929 0.7113601687236069 1 {[WN]|[YH]}EDEY 6 5 + 45.833 0.0 0.0 5.365 5.365 79.921 0.0 0.0 0.0 3.8913076563756377 16.19788758288393 3.8913076563756377 3.8913076563756377 0 0.4247425010840047 1.0969100130080565 0.2614393726401688 0.0 {[WN]|[YH]}EDEY;{[YC]|[HE]}DYEY;[YE]HDEY;{[YC]|[HE]}YDEY 5.365;4.9095;3.7286;3.5509 -;-;-;- 82 1 2.394 61576.6 1.0 1132 3165 4298 DOHH2_400M_050219_1,4299 DOHH2_400M_050219_1,4299,PSAACDEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4300 22.268 176.0 377430.0 25 0 70859.0 20115 LKFLMFSL 8 70 499.7908397951609 997.5671266571218 2 499.7910034060478 MULTI CID FTMS 0 0 0 4298 240575.5 0.196909692651271 9 -0.5291900634765625 2 Unmodified _LKFLMFSL_ ENST00000361908.7_1_3:193355005-193355792:+|nuORF 11.640296217721598 0.738950129755968 1 S{I|L} 2 6 16.326 0.0 0.0 1.6366 0.0 0.0 779.4403088854406 0.0 779.4403088854406 0.0 5.86819398339564 0.0 0.0 0 0.3807196863200844 0.0 0.3054621874040891 0.0 + S{I|L} 1.6366 + + 10 + 1 2.394 58422.4 1.0 1133 3165 4298 DOHH2_400M_050219_1,4300 DOHH2_400M_050219_1,4300,LKFLMFSL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4301 22.273 314.0 220160.0 25 0 14841.0 + 7236 EESDLSRQY 9 106 563.7546752629163 1125.4947975926325 2 563.7553588747978 MULTI CID FTMS 0 0 0 4298 118228.859375 0.1025854724493569 -3 0.0880851745605468 3 Unmodified _EESDLSRQY_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 56.17704186161178 0.0281986971544335 1 EESD{I|L}[KP]DE 9 4 61.577 0.0 0.0 5.4711 0.0 0.0 0.0 80.01472650699452 80.01472650699452 49.10273743745762 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.3807196863200844 1.1421590589602533 EESD{I|L}[KP]DE 5.4711 - 279 + 1 2.394 57829.5 1.0 1134 3165 4298 DOHH2_400M_050219_1,4301 DOHH2_400M_050219_1,4301,EESDLSRQY True True EESDLSRQY 22.27348 563.755358874798 10799194.0 4298.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 6.707376877466838 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4302 22.287 800.0 152310.0 25 0 37060.0 + 30591 REVIQERGY 9 114 575.3053278549377 1148.5961027766753 2 575.3054687380791 MULTI CID FTMS 0 0 0 4298 119624.1484375 1.0 0 0.0 4 Unmodified _REVIQERGY_ ENST00000512692.6_1_4:141290499-141294498:-|nuORF 46.0223103267499 0.0490911897871712 1 [VG]EHTQ{I|L} 7 8 41.168 0.0 0.0 3.5842 0.0 0.0 0.0 381.1887301080688 381.1887301080688 14.41942413513781 0.0 0.0 0.0 0 0.8639829889124311 1.5228787452803376 0.0 0.0 [VG]EHTQ{I|L} 3.5842 - 407 + 1 2.394 96526.1 0.5400000214576721 1135 3165 4298 DOHH2_400M_050219_1,4302 DOHH2_400M_050219_1,4302,REVIQERGY True True REVIQERGY 22.287312 575.305468738079 444263.3125 4298.0 ENST00000512692.6_1_4:141290499-141294498:-|nuORF 6.869159857432048 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4303 22.301 800.0 148630.0 25 0 32838.0 + 45431 YTDHQNSSSYY 11 120 682.773288699871 1363.532024466542 2 682.7729369997978 MULTI CID FTMS 0 0 0 4298 79114.15625 0.1041975642580038 -3 0.0880851745605468 5 Unmodified _YTDHQNSSSYY_ ENSG00000125398|ENST00000245479|SOX9 57.24910588100465 0.0803095280301687 1 S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QNSSSYY 10 4 74.065 0.0 0.0 5.4318 0.0 0.0 135.06859023261876 0.0 135.06859023261876 0.0 20.849621957594096 0.0 0.0 0 1.274227503252014 0.0 2.0994850021680094 0.3494850021680094 S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QNSSSYY 5.4318 - 2248 1 2.394 89098.5 0.4699999988079071 1136 3165 4298 DOHH2_400M_050219_1,4303 DOHH2_400M_050219_1,4303,YTDHQNSSSYY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4304 22.305 187.0 385070.0 25 0 201450.0 -1 0 66 495.2407362345093 494.2334597679093 1 495.2408019900322 MULTI CID FTMS 0 0 0 4298 285847.46875 0.6780411588682324 -1 0.0452842712402343 6 1 T 1 -1 1.1092 0.0 0.0 0.22444 0.0 0.0 261.10420058997806 129.0559481256469 390.1601487156249 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.22444 - 1 + 1 2.394 59046.7 1.0 1137 3165 4298 DOHH2_400M_050219_1,4304 DOHH2_400M_050219_1,4304, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4305 22.308 153.0 214080.0 25 0 18590.0 + 26881 PDFALASPQY 10 75 554.7667860874072 1107.5190192416144 2 554.7681762576103 MULTI CID FTMS 0 0 0 4298 188969.421875 0.0880939260597543 9 -0.5291900634765625 7 Unmodified _PDFALASPQY_ REV__ENSG00000164506|ENST00000321680|STXBP5;REV__nc|ENSG00000164506|Q5T5C0-2|STXBP5;REV__nc|ENSG00000164506|Q5T5C0-3|STXBP5 30.63653989081413 0.2803493085145199 1 [DP][WR]{M(Oxidation (M))|F}[QP]Y 8 -1 + 37.962 0.0 0.0 3.4277 3.4277 83.051 0.0 0.0 0.0 2.644857408525056 32.477738631090304 2.644857408525056 22.16555179137132 0 0.9247425010840048 0.958607314841775 0.9876954943324544 0.0 [DP][WR]{M(Oxidation (M))|F}[QP]Y;[NP]V[EP]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}Y 3.4277;1.4263 -;- 53 1 2.394 31158.8 1.0 1138 3165 4298 DOHH2_400M_050219_1,4305 DOHH2_400M_050219_1,4305,PDFALASPQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4307 22.319 485.0 223320.0 25 0 12340.0 + 33126 SETPEIRKY 9 129 374.865168342833 1121.573675628699 3 374.8644897341728 MULTI CID FTMS 0 0 0 4306 67982.140625 0.3398033730439674 4 -0.274881362915039 1 Unmodified _SETPEIRKY_ ENSG00000141503|ENST00000355280|MINK1;ENST00000574871.1_1_17:4798302-4798913:+|nuORF;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1 12.240655878213236 0.5053430591993562 1 {[ES]|[DT]|[{I|L}C]}TPE 5 4 23.456 0.0 0.0 2.0913 0.0 0.0 0.0 575.3317820755886 575.3317820755886 10.356668758921828 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}TPE 2.0913 + + 76 + 1 2.394 89371.8 1.0 1139 3166 4306 DOHH2_400M_050219_1,4307 DOHH2_400M_050219_1,4307,SETPEIRKY False True SETPEIRKY 22.318899 374.864489734173 1060650.875 4306.0 nc|ENSG00000141503|Q8N4C8-5|MINK1;;nc|ENSG00000141503|Q8N4C8-3|MINK1;;nc|ENSG00000141503|Q8N4C8-2|MINK1;;nc|ENSG00000141503|Q8N4C8-4|MINK1;;ENSG00000141503|ENST00000355280|MINK1;;ENST00000574871.1_1_17:4798302-4798913:+|nuORF 4.088594357172648 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4308 22.323 246.0 376500.0 25 0 48569.0 + 26798 APPPPPPPP 9 97 433.74221334002834 0 433.7421752810478 PEAK CID FTMS 0 0 0 4306 238272.390625 0.4239150401530576 20 -0.8935012817382812 2 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000150275|Q96QU1-2|PCDH15;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000204463|P46379-2|BAG6;ENSG00000005483|ENST00000311117|KMT2E;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000106299|ENST00000223023|WASL;ENSG00000142235|ENST00000600059|LMTK3;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;nc|ENSG00000127481|Q5T4S7-5|UBR4;nc|ENSG00000150275|Q96QU1-6|PCDH15;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000173273|O95271-2|TNKS;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000107758|ENST00000360663|PPP3CB;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000137710|P35241-5|RDX;ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1;nc|ENSG00000168066|Q15637-7|SF1;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;ENSG00000158195|ENST00000618852|WASF2;ENSG00000184937|ENST00000452863|WT1;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000150275|Q96QU1-4|PCDH15;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000204463|P46379|BAG6;nc|ENSG00000005483|Q8IZD2-7|KMT2E;nc|ENSG00000204463|P46379-5|BAG6;ENSG00000168066|ENST00000377390|SF1;ENSG00000165821|ENST00000537235|SALL2;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;nc|ENSG00000182095|O15417-2|TNRC18;nc|ENSG00000171634|Q12830|BPTF;ENSG00000105323|ENST00000392006|HNRNPUL1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;nc|ENSG00000133816|O94851|MICAL2;ENSG00000010017|ENST00000011619|RANBP9;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;nc|ENSG00000185090|Q5VSG8-3|MANEAL;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000150275|Q96QU1|PCDH15;ENSG00000185090|ENST00000373045|MANEAL;ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000107758|P16298-4|PPP3CB;ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000107758|P16298-3|PPP3CB;ENSG00000183307|ENST00000331437|TMEM121B;nc|ENSG00000126464|Q9ULL5-2|PRR12;nc|ENSG00000137710|P35241-2|RDX;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;ENSG00000171634|ENST00000306378|BPTF;ENSG00000204463|ENST00000676615|BAG6;ENSG00000122574|ENST00000242140|WIPF3;nc|ENSG00000107758|P16298-2|PPP3CB;ENSG00000182601|ENST00000331351|HS3ST4;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;ENSG00000184863|ENST00000401878|RBM33;ENSG00000173273|ENST00000310430|TNKS;ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000168066|Q15637-2|SF1;ENSG00000171992|ENST00000307662|SYNPO 56.04830969593885 0.0209912446699182 1 PPP 3 6 23.104 0.0 0.0 2.6695 0.0 0.0 309.16851193686267 262.12006555728755 571.2885774941502 0.0 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 + PPP 2.6695 + + 43 + 1 2.394 76947.3 1.0 1140 3166 4306 DOHH2_400M_050219_1,4308 DOHH2_400M_050219_1,4308,PAPPPPPPP False False APPPPPPPP 22.323476 433.742175281048 22343220.0 4306.0 ENSG00000095539|ENST00000210633|SEMA4G;;nc|ENSG00000150275|Q96QU1-2|PCDH15;;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;;nc|ENSG00000184937|P19544-4|WT1;;nc|ENSG00000204463|P46379-2|BAG6;;ENSG00000005483|ENST00000311117|KMT2E;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000106299|ENST00000223023|WASL;;ENSG00000142235|ENST00000600059|LMTK3;;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000150275|Q96QU1-6|PCDH15;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000173273|O95271-2|TNKS;;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;;ENSG00000215474|ENST00000425639|SKOR2;;ENSG00000107758|ENST00000360663|PPP3CB;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;nc|ENSG00000137710|P35241-5|RDX;;ENSG00000105879|ENST00000440859|CBLL1;;nc|ENSG00000105879|Q75N03-2|CBLL1;;nc|ENSG00000168066|Q15637-7|SF1;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;nc|ENSG00000171634|Q12830-4|BPTF;;nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000126464|ENST00000418929|PRR12;;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;;ENSG00000158195|ENST00000618852|WASF2;;ENSG00000184937|ENST00000452863|WT1;;nc|ENSG00000165821|Q9Y467|SALL2;;nc|ENSG00000150275|Q96QU1-4|PCDH15;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000184937|P19544-2|WT1;;nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000005483|Q8IZD2-7|KMT2E;;nc|ENSG00000204463|P46379-5|BAG6;;ENSG00000168066|ENST00000377390|SF1;;ENSG00000165821|ENST00000537235|SALL2;;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;;nc|ENSG00000182095|O15417-2|TNRC18;;nc|ENSG00000171634|Q12830|BPTF;;ENSG00000105323|ENST00000392006|HNRNPUL1;;nc|ENSG00000184937|P19544|WT1;;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;;nc|ENSG00000133816|O94851|MICAL2;;ENSG00000010017|ENST00000011619|RANBP9;;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;;nc|ENSG00000185090|Q5VSG8-3|MANEAL;;nc|ENSG00000184937|P19544-8|WT1;;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;;nc|ENSG00000150275|Q96QU1|PCDH15;;ENSG00000185090|ENST00000373045|MANEAL;;ENSG00000137710|ENST00000645495|RDX;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000107758|P16298-4|PPP3CB;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000005483|Q8IZD2-2|KMT2E;;nc|ENSG00000107758|P16298-3|PPP3CB;;ENSG00000183307|ENST00000331437|TMEM121B;;nc|ENSG00000126464|Q9ULL5-2|PRR12;;nc|ENSG00000137710|P35241-2|RDX;;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;nc|ENSG00000095539|Q9NTN9|SEMA4G;;ENSG00000171634|ENST00000306378|BPTF;;ENSG00000204463|ENST00000676615|BAG6;;ENSG00000122574|ENST00000242140|WIPF3;;nc|ENSG00000107758|P16298-2|PPP3CB;;ENSG00000182601|ENST00000331351|HS3ST4;;nc|ENSG00000184937|P19544-3|WT1;;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;;nc|ENSG00000137710|P35241-4|RDX;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;;ENSG00000184863|ENST00000401878|RBM33;;ENSG00000173273|ENST00000310430|TNKS;;ENSG00000150275|ENST00000644397|PCDH15;;nc|ENSG00000168066|Q15637-2|SF1;;ENSG00000171992|ENST00000307662|SYNPO 1.98785678545634 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4309 22.332 465.0 178000.0 25 0 15918.0 + 40656 VLEENQEHY 9 104 580.764787640385 1159.5150223475698 2 580.7654296755791 MULTI CID FTMS 0 0 0 4306 117666.78125 1.0 0 0.0 3 Unmodified _VLEENQEHY_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107 47.74868867922204 0.0453060283459952 1 V{I|L}EQQDE{[WN]|[YH]} 9 3 + 72.898 0.0 0.0 6.2869 6.2869 91.846 0.0 0.0 0.0 50.19000227735063 5.162574822053543 5.162574822053543 15.728050365394424 0 0.7742275032520141 2.0 1.2302046884880935 0.0 V{I|L}EQQDE{[WN]|[YH]};V{I|L}E[HT]{[{M(Oxidation (M))|F}D]|MM}{[WN]|[YH]};V{I|L}[QA]{[DA]|[EG]}DE{[WN]|[YH]};V{I|L}{M(Oxidation (M))|F}[YG]{[{M(Oxidation (M))|F}D]|MM}{[WN]|[YH]} 6.2869;4.9305;4.6034;3.8892 -;-;-;- 188 + 1 2.394 70831.6 1.0 1141 3166 4306 DOHH2_400M_050219_1,4309 DOHH2_400M_050219_1,4309,VLEENQEHY True True VLEENQEHY 22.331724 580.765429675579 669667.9375 4306.0 ENSG00000111581|ENST00000229179|NUP107;;nc|ENSG00000111581|P57740-3|NUP107;;nc|ENSG00000111581|P57740-2|NUP107 6.605630397796631 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4310 22.346 800.0 228830.0 25 0 21240.0 25803 NKQDAVKEL 9 149 522.7876759029871 1043.560798872774 2 522.7880126833916 MULTI CID FTMS 0 0 0 4306 108796.4921875 0.5560704773693773 -2 0.0944156646728515 4 Unmodified _NKQDAVKEL_ ENSG00000162753|ENST00000367714|SLC9C2 57.72198328787511 0.0273433238377839 1 {[QN]|[E{I|L}]|[KN]}[WQ]VKE{I|L} 8 2 + 75.227 0.0 0.0 7.2087 7.2087 82.062 0.0 0.0 0.0 11.63780233291277 16.409780573583326 11.63780233291277 1.3033376849500655 0 1.4634679910804405 1.0 1.2131582230515534 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}[WQ]VKE{I|L};{[QN]|[E{I|L}]|[KN]}[QA]DVKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}GRDVKE{I|L};[TP]SRDVKE{I|L};{[QN]|[E{I|L}]|[KN]}KN[NG]KE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]DVKE{I|L};{[ES]|[DT]|[{I|L}C]}[KP]DVKE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]DVKE{I|L};{I|L}{M(Oxidation (M))|F}KVD[QP]TP;{[NV]|[RG]}{NN|[MP]|[D{I|L}]|[EV]}DVKE{I|L} 7.2087;7.0838;6.0935;5.2166;5.1715;5.0479;4.8791;4.8791;4.7161;4.5907 -;-;-;-;-;-;-;-;-;- 1075 1 2.394 144127.0 0.5199999809265137 1142 3166 4306 DOHH2_400M_050219_1,4310 DOHH2_400M_050219_1,4310,NKQDAVKEL True True RTPSDVKEL 22.345555 522.788012683392 990903.875 4306.0 ENST00000495420.5_1_15:69079601-69113141:-|nuORF;;ENSG00000139223|ENST00000266594|ANP32D;;ENSG00000140350|ENST00000465139|ANP32A;;ENST00000560832.1_1_15:35529508-35529652:+|nuORF 3.744121472040812 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4311 22.356 588.0 211590.0 25 0 14446.0 + + 6739 DELQSERNY 9 148 577.2624853790923 1152.5104178249844 2 577.2639037966728 MULTI CID FTMS 0 0 0 4306 84841.0078125 1.0 0 0.0 5 Unmodified _EDLSNHYLY_ ENSG00000108055|ENST00000361804|SMC3 19.256988751693697 0.3154191944385105 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QSERNY 9 -1 + 40.526 0.0 0.0 3.5163 3.5163 76.577 0.0 0.0 0.0 21.28286450626948 7.488426348234967 7.488426348234967 6.89210167046862 0 0.6989700043360187 0.0 0.3807196863200844 0.4247425010840047 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QSERNY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QSERGGY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[AG]SERNY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QSE[VG]NY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[TV]|[{I|L}S]}YHNY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[TV]|[{I|L}S]}YTE[PS];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Q[KC]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Q[QP][HC][PS];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[AG]SERGGY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QSE[VG]GGY 3.5163;2.9183;2.7173;2.7173;2.6554;2.5705;2.3066;2.2563;2.1231;2.1231 -;-;-;-;-;-;-;-;-;- 904 + 1 2.394 94790.3 1.0 1143 3166 4306 DOHH2_400M_050219_1,4311 DOHH2_400M_050219_1,4311,EDLSNHYLY False False DELQSERNY 22.355848 577.263903796673 375147.0625 4306.0 ENSG00000108055|ENST00000361804|SMC3 4.216509024302165 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4313 22.361 28.0 1896100.0 25 0 223480.0 + 800 AESPAGHSF 9 83 451.7037879525353 901.3930229718708 2 451.7037841677666 MULTI CID FTMS 0 0 0 4312 1919389.25 0.9886354446901368 -1 0.0480766296386718 1 Unmodified _AESPAGHSF_ ENSG00000136699|ENST00000680298|SMPD4;ENST00000438378.2_1_2:132275414-132277996:+|nuORF;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;nc|ENSG00000136699|Q9NXE4-10|SMPD4;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4-5|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;nc|ENSG00000136699|Q9NXE4-7|SMPD4;nc|ENSG00000136699|Q9NXE4-8|SMPD4;nc|ENSG00000136699|Q9NXE4-9|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4 71.13359017698441 0.0206607516130725 1 {[CP]|[EA]}SPAGHS{M(Oxidation (M))|F} 9 0 + 64.16 0.0 0.0 7.1178 7.1178 87.679 0.0 0.0 0.0 39.1988453462847 21.32405685742488 21.32405685742488 6.522496736287458 0 0.9247425010840048 0.0 1.7856668758921828 0.0 + + {[CP]|[EA]}SPAGHS{M(Oxidation (M))|F};{[CP]|[EA]}SPQHS{M(Oxidation (M))|F};{[CP]|[EA]}SP[NP][C(Carbamidomethyl (C))K];[PS][HQ]{M(Oxidation (M))|F}S{[CP]|[EA]};[PS][HQ]S{M(Oxidation (M))|F}{[CP]|[EA]};[HS]QP{M(Oxidation (M))|F}S{[CP]|[EA]};[PG][HA]S{M(Oxidation (M))|F}S{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}S{M(Oxidation (M))|F}[YN][PG];[PS]N[HT]{M(Oxidation (M))|F}{[CP]|[EA]};[HS]QPS{M(Oxidation (M))|F}{[CP]|[EA]} 7.1178;6.3942;3.0109;2.343;2.1476;1.6008;1.5616;1.5138;1.4259;1.4054 +;-;-;-;-;-;-;-;-;- + 299 + 1 2.403 45245.2 1.0 1144 3167 4312 DOHH2_400M_050219_1,4313 DOHH2_400M_050219_1,4313,AESPAGHSF True True AESPAGHSF 22.360692 451.703784167767 38219925.0 4312.0 ENST00000438378.2_1_2:132275414-132277996:+|nuORF;;nc|ENSG00000136699|Q9NXE4-9|SMPD4;;nc|ENSG00000136699|Q9NXE4-4|SMPD4;;nc|ENSG00000136699|Q9NXE4-5|SMPD4;;nc|ENSG00000136699|Q9NXE4-3|SMPD4;;nc|ENSG00000136699|Q9NXE4-8|SMPD4;;ENSG00000136699|ENST00000680298|SMPD4;;nc|ENSG00000136699|Q9NXE4-7|SMPD4;;nc|ENSG00000136699|Q9NXE4-6|SMPD4;;nc|ENSG00000136699|Q9NXE4-2|SMPD4;;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;;nc|ENSG00000136699|Q9NXE4|SMPD4;;nc|ENSG00000136699|Q9NXE4-10|SMPD4 7.985343933105469 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4314 22.363 79.0 606900.0 25 0 43506.0 + -1 SSSTIKRNV 9 83 517.2856139466651 0 517.2868530154228 PEAK CID FTMS 0 0 0 4312 459027.1875 0.3372650271279295 -2 0.097208023071289 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SSSTIKRNV_ REV__ENSG00000170929|ENST00000641627|OR1M1 4.3292370932331545 0.3444685223463734 1 N 1 -1 6.9897 0.0 0.0 0.67693 0.0 0.0 245.0838488876676 670.4069201020247 915.4907689896922 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.67693 + + 3 + 1 2.403 43717.6 1.0 1145 3167 4312 DOHH2_400M_050219_1,4314 DOHH2_400M_050219_1,4314,SSSTIKRNV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4315 22.364 64.0 936050.0 25 0 48354.0 27041 PEQNDRTPL 9 100 535.2670828122698 1068.5196126913395 2 535.2673828005791 MULTI CID FTMS 0 0 0 4312 800289.375 0.6133930396057845 -2 0.097208023071289 3 Unmodified _PEQNDRTPL_ ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;ENST00000544562.5_1_14:23067206-23078652:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4 15.847184025352805 0.4077185912009129 1 [EP]QDTRNP{I|L} 9 3 + 39.324 0.0 0.0 3.6803 3.6803 76.091 0.0 0.0 0.0 3.2568864632742915 5.91251590079672 3.2568864632742915 5.91251590079672 0 0.0 0.0 0.4247425010840047 0.3807196863200844 [EP]QDTRNP{I|L};[EP]QDTRV[QP];[EP]QDTRGGP{I|L};[EP][AG]DTRNP{I|L};[EP][AG]DTRV[QP];[EP][AG]DTRGGP{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YY[VG]NP{I|L};[EP]Q{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[QP]P{I|L};[QP][KS]HHQ[HA];{[QD]|[EN]|[WG]|[KD]|[RS]}[KP][{M(Oxidation (M))|F}V]Q[HA] 3.6803;3.1269;2.8185;2.8185;2.2652;1.9608;0.42679;0.28755;0.084745;0.063334 -;-;-;-;-;-;-;-;-;- 341 + 1 2.403 52526.5 1.0 1146 3167 4312 DOHH2_400M_050219_1,4315 DOHH2_400M_050219_1,4315,PEQNDRTPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4316 22.378 800.0 145240.0 25 0 8074.2 -1 STCLVCPQDTF 11 126 635.7759815219742 1269.5374101107484 2 635.7755004763603 MULTI CID FTMS 0 0 0 4312 110515.203125 0.2160166331915451 -2 0.097208023071289 4 Carbamidomethyl (C) _STC(Carbamidomethyl (C))LVCPQDTF_ ENSG00000215788|ENST00000356876|TNFRSF25;ENST00000469691.5_1_1:6522722-6525298:-|nuORF;ENST00000513135.5_1_1:6524426-6525611:-|nuORF;nc|ENSG00000215788|Q93038-10|TNFRSF25;nc|ENSG00000215788|Q93038-11|TNFRSF25;nc|ENSG00000215788|Q93038-12|TNFRSF25;nc|ENSG00000215788|Q93038-2|TNFRSF25;nc|ENSG00000215788|Q93038-3|TNFRSF25;nc|ENSG00000215788|Q93038-4|TNFRSF25;nc|ENSG00000215788|Q93038-5|TNFRSF25 20.41453444215458 0.6105011870913812 1 [NP]HDEAQQNA 10 -1 80.303 0.0 0.0 6.3254 0.0 0.0 0.0 162.05609512792458 162.05609512792458 47.22093803183156 0.0 0.0 0.0 0 0.9247425010840048 0.7958800173440752 0.6861818737241735 1.110924374808178 [NP]HDEAQQNA 6.3254 - 3271 1 2.403 89201.4 0.5699999928474426 1147 3167 4312 DOHH2_400M_050219_1,4316 DOHH2_400M_050219_1,4316,STCLVCPQDTF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4317 22.383 268.0 267980.0 25 0 54450.0 -1 0 104 548.2912747674399 547.2839983008398 1 548.2912475466728 MULTI CID FTMS 0 0 0 4312 139697.84375 0.2217324463898579 -98 1.9482421875 5 1 Y 1 -1 14.604 0.0 0.0 2.6685 0.0 0.0 366.21008275083824 0.0 366.21008275083824 0.0 5.206963425791127 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.6685 - 13 + 1 2.403 58505.9 1.0 1148 3167 4312 DOHH2_400M_050219_1,4317 DOHH2_400M_050219_1,4317, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4318 22.397 800.0 212090.0 25 0 21930.0 -1 0 61 859.3684806168555 2575.0836124507664 3 859.3678466677666 MULTI CID FTMS 0 0 0 4312 125419.6640625 0.9774911851318376 -1 0.0480766296386718 6 1 [RD][WR]DD 6 -1 16.923 0.0 0.0 0.6572 0.0 0.0 0.0 1728.6967534104822 1728.6967534104822 5.6863623584101255 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [RD][WR]DD 0.6572 - 24 1 2.403 122357.0 0.5400000214576721 1149 3167 4312 DOHH2_400M_050219_1,4318 DOHH2_400M_050219_1,4318, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4319 22.4 196.0 413830.0 25 0 101060.0 + -1 SMEKLKEYMER 11 72 492.5662125472503 1474.6768082419508 3 492.5659667849541 MULTI CID FTMS 0 0 0 4312 104886.2421875 0.9887831103543824 -1 0.0480766296386718 7 2 Oxidation (M) _SM(Oxidation (M))EKLKEYM(Oxidation (M))ER_ REV__ENSG00000214414|ENST00000398290|TRIM77 1.214830529360525 0.8694162858786273 1 S 1 -1 10.485 0.0 0.0 0.71097 0.0 0.0 843.3647007685964 541.2594088190061 1384.6241095876026 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 S 0.71097 + + 25 + 1 2.403 67760.3 1.0 1150 3167 4312 DOHH2_400M_050219_1,4319 DOHH2_400M_050219_1,4319,SMEKLKEYMER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4321 22.417 800.0 45585.0 25 0 5147.5 28228 PQPRRRRRRA 10 66 674.9150849680673 0 674.9150878787041 PEAK CID FTMS 0 0 0 4320 38958.14453125 0.4269598816447773 1 -0.1080894470214843 1 Unmodified _PQPRRRRRRA_ ENST00000313478.11_1_15:50941001-50979001:-|nuORF 0.4007161486938917 0.3961065659209837 1 T 1 10 7.7866 0.0 0.0 0.57772 0.0 0.0 673.514910071097 570.2342012994749 1243.749111370572 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T 0.57772 - 4 + 1 2.403 36910.9 0.5400000214576721 1151 3168 4320 DOHH2_400M_050219_1,4321 DOHH2_400M_050219_1,4321,PQPRRRRRRA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4322 22.419 95.0 1476000.0 25 0 102900.0 + 7289 EEVHDLERKY 10 101 439.88621103309566 1316.636803699487 3 439.8860351443291 MULTI CID FTMS 0 0 0 4320 693292.1875 0.1018966149233852 -1 0.0445899963378906 2 Unmodified _EEVHDLERKY_ ENSG00000187109|ENST00000618691|NAP1L1;ENSG00000205531|ENST00000380542|NAP1L4;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000205531|Q99733-2|NAP1L4 69.33821966488729 0.0189579340102328 1 EEVHD{I|L}ERKY 10 0 EE + + 69.054 16.65 6.4515 5.2447 5.2447 57.433 0.0 0.0 0.0 0.0 46.38525594981779 0.0 0.0 0 1.1549471895720984 0.0 0.6109243748081782 0.6549471895720985 + + EEVHD{I|L}ERKY 5.2447 + + 1224 + 1 2.403 116568.4 1.0 1152 3168 4320 DOHH2_400M_050219_1,4322 DOHH2_400M_050219_1,4322,EEVHDLERKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4323 22.423 243.0 328790.0 25 0 19957.0 + 23434 LTEVNKAGTQY 11 111 612.3171882829882 1222.6198236327764 2 612.3173095583916 MULTI CID FTMS 0 0 0 4320 266059.5625 0.1833107518863948 -1 0.0445899963378906 3 Unmodified _LTEVNKAGTQY_ ENSG00000170542|ENST00000380698|SERPINB9 94.90867108109512 0.0004917860609384 1 {I|L}TEVNK[QT]QY 10 2 + 96.63 0.0 0.0 7.9035 7.9035 91.884 0.0 0.0 0.0 63.57068014014206 11.689615513722202 11.689615513722202 9.164539485499262 0 1.2302046884880935 2.0 0.3807196863200844 1.5114393726401687 {I|L}TEVNK[QT]QY;{I|L}TEVGGK[QT]QY;{I|L}TEVNK[QT][AG]Y;{I|L}TEVQEA[H{I|L}][PS];{I|L}TEVQEA[HT][VP];{I|L}TEVN[DV][H{I|L}][PS];{I|L}TEVN[DV][HT][VP];{I|L}TEVN[HD][{I|L}V][PS];{I|L}TEVN[HD]{[TV]|[{I|L}S]}[VP];{I|L}T[Y{M(Oxidation (M))|F}]QQV{I|L}[DP] 7.9035;7.1539;6.8425;6.3756;6.3652;6.0501;6.0397;5.8039;5.7935;5.4943 -;-;-;-;-;-;-;-;-;- 4603 + 1 2.403 65137.9 1.0 1153 3168 4320 DOHH2_400M_050219_1,4323 DOHH2_400M_050219_1,4323,LTEVNKAGTQY True True LTEVNKAGTQY 22.42346 612.317309558392 14044057.0 4320.0 ENSG00000170542|ENST00000380698|SERPINB9 8.564348856608072 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4324 22.437 800.0 393070.0 25 0 33107.0 + 7291 EEVHDLERKY 10 115 659.3255136400954 1316.6364743469908 2 659.3257934451103 MULTI CID FTMS 0 0 0 4320 146563.828125 0.0867643192388903 -1 0.0445899963378906 4 Unmodified _EEVHDLERKY_ ENSG00000187109|ENST00000618691|NAP1L1;ENSG00000205531|ENST00000380542|NAP1L4;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000205531|Q99733-2|NAP1L4 179.28349886687624 1.9219350804874037e-10 1 EEVHD{I|L}ERKY 10 0 + 118.17 0.0 0.0 8.9753 8.9753 95.989 0.0 0.0 0.0 25.797349202424584 16.53212513775344 16.53212513775344 13.226825097560422 0 3.5 1.5228787452803376 3.059894379144197 0.0 + + EEVHD{I|L}ERKY;EEVHVEERKY;[HV]EED{I|L}ERKY;{[ET]|[MV]}YTD{I|L}ERKY;[HV]ETK{I|L}DHV[HC];[HV][KT]E{I|L}DHV[HC];{NN|[MP]|[D{I|L}]|[EV]}EHD{I|L}ERKY;Y{[HG]|PP}HD{I|L}E[VG]KY;[HD]{I|L}ED{I|L}ERKY;[HV]EEVEERKY 8.9753;7.9707;7.016;6.4855;6.4779;6.3776;6.3568;6.3141;6.2124;6.0114 +;-;-;-;-;-;-;-;-;- + 3007 1 2.403 226152.1 0.6499999761581421 1154 3168 4320 DOHH2_400M_050219_1,4324 DOHH2_400M_050219_1,4324,EEVHDLERKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4325 22.451 800.0 152340.0 25 0 9366.1 -1 LEMWKEMQEDI 11 107 734.3267413812887 1466.6389298293773 2 734.3262206912041 MULTI CID FTMS 0 0 0 4320 142447.5 0.6798319808365866 -1 0.0445899963378906 5 Oxidation (M) _LEM(Oxidation (M))WKEMQEDI_ ENSG00000168944|ENST00000306467|CEP120;ENST00000513565.6_1_5:122694091-122724023:-|nuORF;nc|ENSG00000168944|Q8N960-2|CEP120 17.44264345198275 0.6723198055858692 1 {I|L}EGEGSSGGG[HA]{I|L}E 14 -1 120.52 0.0 0.0 8.2174 0.0 0.0 0.0 183.0414064996704 183.0414064996704 94.43897323213156 0.0 0.0 0.0 0 0.8494850021680094 2.0 2.190614065464281 0.0 {I|L}EGEGSSGGG[HA]{I|L}E 8.2174 - 7067 + 1 2.403 89134.5 0.6200000047683716 1155 3168 4320 DOHH2_400M_050219_1,4325 DOHH2_400M_050219_1,4325,LEMWKEMQEDI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4326 22.465 800.0 138530.0 25 0 18441.0 + 9592 FLKRKEEEL 9 120 596.3402380926899 1190.6659232521797 2 596.3404418826103 MULTI CID FTMS 0 0 0 4320 118605.515625 1.0 0 0.0 6 Unmodified _FLKRKEEEL_ ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1;nc|ENSG00000179119|Q68D10-3|SPTY2D1 47.594388314883695 0.0456443387682827 1 {[QN]|[E{I|L}]|[KN]}[{I|L}T][{I|L}T]{I|L}{M(Oxidation (M))|F}E{I|L} 10 7 + 45.556 0.0 0.0 3.8261 3.8261 70.956 0.0 0.0 0.0 2.793774815719204 18.69886465407616 2.793774815719204 1.2371250542002343 0 0.2887254899964357 1.3979400086720375 0.805462187404089 0.0 {[QN]|[E{I|L}]|[KN]}[{I|L}T][{I|L}T]{I|L}{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}T][{I|L}T]E{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}T][{I|L}T]{I|L}E{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KRKEEE{I|L};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}K{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}T][{I|L}T]{I|L}{M(Oxidation (M))|F}{I|L}E;[{I|L}T]{[QN]|[E{I|L}]|[KN]}[{I|L}T]{I|L}{M(Oxidation (M))|F}E{I|L};[{I|L}T]{[QN]|[E{I|L}]|[KN]}[{I|L}T]E{I|L}{M(Oxidation (M))|F}{I|L};{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[{I|L}T]{[QN]|[E{I|L}]|[KN]}VP;{[ET]|[MV]}{I|L}{I|L}[{I|L}T]{I|L}{M(Oxidation (M))|F}E{I|L} 3.8261;3.7222;3.2166;3.1478;3.1352;2.7582;2.5925;2.4886;2.1106;2.1034 -;-;-;+;-;-;-;-;-;- + 347 1 2.403 83393.0 0.5899999737739563 1156 3168 4320 DOHH2_400M_050219_1,4326 DOHH2_400M_050219_1,4326,FLKRKEEEL True True FLKRKEEEL 22.464979 596.34044188261 653017.5 4320.0 nc|ENSG00000179119|Q68D10-3|SPTY2D1;;ENSG00000179119|ENST00000336349|SPTY2D1;;nc|ENSG00000179119|Q68D10-2|SPTY2D1;;ENST00000536336.5_1_11:18633859-18655855:-|nuORF 1.7719412644704182 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4327 22.479 800.0 67162.0 25 0 9209.1 -1 YSTYCYRCDD 10 85 673.2445863580692 1344.4746197829384 2 673.2446777224541 MULTI CID FTMS 0 0 0 4320 109788.609375 1.0 0 0.0 7 Carbamidomethyl (C) _YSTYC(Carbamidomethyl (C))YRCDD_ ENSG00000140455|ENST00000380324|USP3 13.042465956692816 0.6287021003332052 1 YSD 3 -1 48.94 0.0 0.0 3.6401 0.0 0.0 0.0 976.3270237409996 976.3270237409996 33.762874945799766 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YSD 3.6401 - 56 + 1 2.403 43370.7 0.5699999928474426 1157 3168 4320 DOHH2_400M_050219_1,4327 DOHH2_400M_050219_1,4327,YSTYCYRCDD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4328 22.491 635.0 132260.0 25 0 9621.6 34701 SPVAEEHSL 9 120 484.7383467309175 967.462140528635 2 484.7380859255791 MULTI CID FTMS 0 0 0 4320 101650.4609375 1.0 0 0.0 8 Unmodified _SPVAEEHSL_ ENSG00000134769|ENST00000444659|DTNA;nc|ENSG00000134769|Q9Y4J8-10|DTNA;nc|ENSG00000134769|Q9Y4J8-11|DTNA 15.847184025352805 0.4077185912009129 1 {[TV]|[{I|L}S]}CP[DP]HS{I|L} 9 5 {[TV]|[{I|L}S]}CP[DP]H + + 18.258 9.2099 1.2291 1.8872 1.8872 48.802 0.0 0.0 0.0 0.0 3.960828060918829 0.0 0.0 0 0.0 0.0 0.2059771852360797 0.0 {[TV]|[{I|L}S]}CP[DP]HS{I|L} 1.8872 - 129 + 1 2.403 67562.6 1.0 1158 3168 4320 DOHH2_400M_050219_1,4328 DOHH2_400M_050219_1,4328,SPVAEEHSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4329 22.505 800.0 121330.0 25 0 12081.0 + 6573 EALTKHDL 8 131 463.7509608011512 0 463.7508422732353 PEAK CID FTMS 0 0 0 4320 92173.28125 1.0 0 0.0 9 Unmodified _EALTKHDL_ ENSG00000135476|ENST00000257934|ESPL1;nc|ENSG00000135476|Q14674-2|ESPL1 20.453626601364224 0.4093984001168845 1 N 1 8 5.2165 0.0 0.0 0.56365 0.0 0.0 726.3543100526947 82.0669191949828 808.4212292476775 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 N 0.56365 - 25 + 1 2.403 78132.1 0.4300000071525574 1159 3168 4320 DOHH2_400M_050219_1,4329 DOHH2_400M_050219_1,4329,EALTKHDL False True EALTKHDL 22.505158 463.750842273235 409424.65625 4320.0 nc|ENSG00000135476|Q14674-2|ESPL1;;ENSG00000135476|ENST00000257934|ESPL1 -0.2048882643381754 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4330 22.509 180.0 276950.0 25 0 37145.0 5540 DMKQQHVI 8 80 499.75901348487935 0 499.7584106326103 PEAK CID FTMS 0 0 0 4320 82896.984375 0.6247151317358965 -1 0.0445899963378906 10 Unmodified _DMKQQHVI_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 9.347437153973935 0.5488964601725408 1 H 1 7 8.9794 0.0 0.0 0.90019 0.0 0.0 630.2816245265963 227.1403750055297 857.4219995321259 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + H 0.90019 + + 36 + 1 2.403 44607.6 1.0 1160 3168 4320 DOHH2_400M_050219_1,4330 DOHH2_400M_050219_1,4330,DMKQQHVI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4332 22.516 156.0 566500.0 25 0 70511.0 -1 0 51 644.7779005225385 2575.082496223754 4 645.0291625857353 MULTI CID FTMS 0 0 0 4331 321596.96875 0.548455222125073 1 -0.0741252899169921 1 1 DH 2 -1 20.217 0.0 0.0 0.78508 0.0 0.0 1731.7165672247154 588.2486666315061 2319.9652338562214 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 DH 0.78508 - 12 + 1 2.399 72065.7 1.0 1161 3169 4331 DOHH2_400M_050219_1,4332 DOHH2_400M_050219_1,4332, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4333 22.524 503.0 134140.0 25 0 7086.5 + -1 LETCHALRET 10 106 615.3022997988913 1228.5900466645826 2 615.3038207888603 MULTI CID FTMS 0 0 0 4331 119657.3828125 0.7578568766498174 3 -0.2016410827636718 2 Carbamidomethyl (C) _LETC(Carbamidomethyl (C))HALRET_ REV__ENSG00000185915|ENST00000379499|KLHL34 13.90604991867851 0.6142120002215601 1 VWW 3 -1 21.682 0.0 0.0 1.7648 0.0 0.0 739.3426985916271 0.0 739.3426985916271 0.0 3.610469015915779 0.0 0.0 0 0.0 0.0 0.0 0.0 VWW 1.7648 - 291 1 2.399 55257.4 1.0 1162 3169 4331 DOHH2_400M_050219_1,4333 DOHH2_400M_050219_1,4333,LETCHALRET False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4334 22.531 349.0 267160.0 25 0 23708.0 + + -1 VEGEGEEEGEEY 12 106 678.2600865833556 1354.505620233511 2 678.2595092654228 MULTI CID FTMS 0 0 0 4331 246965.640625 0.6749539235446843 -1 0.1080894470214843 3 Oxidation (M) _EGEEEEEM(Oxidation (M))RMA_ ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000123416|ENST00000336023|TUBA1B;nc|ENSG00000123416|P68363-2|TUBA1B 22.736283301280096 0.5583477779825423 1 {[DA]|[EG]}EEGEVEGEEY 12 -1 + 93.068 0.0 0.0 6.871 6.871 82.927 0.0 0.0 0.0 9.4812969097282 11.382353118286233 9.4812969097282 2.5134875797167666 0 0.6989700043360187 0.9208187539523752 3.508864383480216 0.0 {[DA]|[EG]}EEGEVEGEEY;{[DA]|[EG]}EGEEVEGEEY;{[DA]|[EG]}EEGVEEGEEY;{[DA]|[EG]}EEGEEVGEEY;{[DA]|[EG]}EGEVEEGEEY;{[DA]|[EG]}EEEGVEGEEY;{[DA]|[EG]}EEGEVGEEEY;{[DA]|[EG]}EGEEEVGEEY;EEGEGEVEGEEY;{[DA]|[EG]}EGEEVGEEEY 6.871;6.6854;6.5753;6.4105;6.3897;6.3812;6.2796;6.2249;6.171;6.094 -;-;-;-;-;-;-;-;-;- 8187 1 2.399 69961.3 1.0 1163 3169 4331 DOHH2_400M_050219_1,4334 DOHH2_400M_050219_1,4334,EGEEEEEMRMA False False VEGEGEEEGEEY 22.530695 678.259509265423 2379752.75 4331.0 ENSG00000167552|ENST00000301071|TUBA1A;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;ENSG00000123416|ENST00000336023|TUBA1B;;nc|ENSG00000123416|P68363-2|TUBA1B 4.867927591005961 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4335 22.545 800.0 171130.0 25 0 4993.8 -1 0 109 753.8452131843816 3011.351746871126 4 754.0965453982353 MULTI CID FTMS 0 0 0 4331 182842.25 1.0 0 0.0 4 1 NVGT[PS]GT 8 -1 39.162 0.0 0.0 1.3005 0.0 0.0 736.2909310201879 1558.6690278482088 2294.959958868397 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.9247425010840048 0.0 NVGT[PS]GT 1.3005 - 791 + 1 2.399 100740.0 0.699999988079071 1164 3169 4331 DOHH2_400M_050219_1,4335 DOHH2_400M_050219_1,4335, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4336 22.554 512.0 165970.0 25 0 9862.8 + 5542 DMKQQHVIET 10 110 614.8021069337212 0 614.8032714724541 PEAK CID FTMS 0 0 0 4331 128140.578125 1.0 0 0.0 5 Unmodified _DMKQQHVIET_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 29.43715596616401 0.2222611817437702 1 E{I|L}V 3 9 19.327 0.0 0.0 1.5744 0.0 0.0 119.05705292697152 764.3151374662846 883.3721903932561 0.0 0.0 0.0 0.0 0 0.6139829889124311 0.0 0.0 0.0 E{I|L}V 1.5744 - 143 + 1 2.399 69980.6 1.0 1165 3169 4331 DOHH2_400M_050219_1,4336 DOHH2_400M_050219_1,4336,DMKQQHVIET False True DMKQQHVIET 22.553553 614.803271472454 5363397.0 4331.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 6.366603533426921 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4337 22.558 263.0 161110.0 25 0 8960.9 + -1 AAGPISERNQD 11 83 600.2839728365567 0 600.2856933474541 PEAK CID FTMS 0 0 0 4331 95560.5390625 1.0 0 0.0 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAGPISERNQD_ ENSG00000143368|ENST00000271628|SF3B4 16.565877749689598 0.3896274251992772 1 P{I|L}{M(Oxidation (M))|F}EP 5 -1 23.443 0.0 0.0 1.956 0.0 0.0 241.09959468190988 371.13984094791255 612.2394356298224 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}{M(Oxidation (M))|F}EP 1.956 - 195 + 1 2.399 35973.1 1.0 1166 3169 4331 DOHH2_400M_050219_1,4337 DOHH2_400M_050219_1,4337,AAGPISERNQD False False AAGPISERNQD 22.558441 600.285693347454 717808.375 4331.0 ENSG00000143368|ENST00000271628|SF3B4 4.877084096272786 2.0 True 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4338 22.563 233.0 245880.0 25 0 19959.0 + 7393 EGHSKTIL 8 106 442.7446737899775 883.474794646755 2 442.7449828982353 MULTI CID FTMS 0 0 0 4331 216655.765625 1.0 0 0.0 7 Unmodified _EGHSKTIL_ ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106 16.942295170755138 0.6606234159769251 1 {I|L} 1 7 15.485 0.0 0.0 1.7527 0.0 0.0 752.3796541211675 0.0 752.3796541211675 0.0 9.225490200071285 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.7527 + + 110 + 1 2.399 50506.6 1.0 1167 3169 4331 DOHH2_400M_050219_1,4338 DOHH2_400M_050219_1,4338,EGHSKTIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4339 22.572 523.0 141140.0 25 0 14099.0 -1 0 78 603.2772739777254 3011.3499875556267 5 603.6793701052666 MULTI CID FTMS 0 0 0 4331 124801.609375 1.0 0 0.0 8 1 Q 1 -1 7.4743 0.0 0.0 0.2482 0.0 0.0 2318.0665174457363 562.20213736997 2880.268654815706 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 Q 0.2482 - 35 + 1 2.399 61046.9 1.0 1168 3169 4331 DOHH2_400M_050219_1,4339 DOHH2_400M_050219_1,4339, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4340 22.583 546.0 196420.0 25 0 11538.0 + 10640 FVQLCPYKGQG 11 118 620.3130774713335 1238.6116020094669 2 620.3128539919853 MULTI CID FTMS 0 0 0 4331 120221.078125 0.210733639043657 -51 1.2481346130371094 9 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 16.149105407346934 0.6992268271266642 1 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 71.972 13.232 3.3398 5.8107 5.8107 59.648 0.0 0.0 0.0 0.0 52.10175215340689 0.0 0.0 0 2.6989700043360187 0.0 0.0 1.2689301784845295 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 5.8107 - 2872 + 1 2.399 83231.9 1.0 1169 3169 4331 DOHH2_400M_050219_1,4340 DOHH2_400M_050219_1,4340,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4342 22.587 78.0 862870.0 25 0 48983.0 + 22782 QIRPDRQTL 9 96 376.2158248076517 1125.625645023155 3 376.2155944705009 MULTI CID FTMS 0 0 0 4341 653886.125 0.8591903594930256 1 -0.0721607208251953 1 Unmodified _LQRQPQPFL_ ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581551.1_1_17:62499042-62499524:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;ENSG00000108654|ENST00000225792|DDX5;nc|ENSG00000108654|P17844-2|DDX5;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;ENSG00000100201|ENST00000403230|DDX17;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;nc|ENSG00000100201|Q92841-3|DDX17;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;nc|ENSG00000100201|Q92841-2|DDX17 16.149105407346934 0.3995459350917656 1 YR[{M(Oxidation (M))|F}V]{I|L} 5 6 25.295 0.0 0.0 2.2472 0.0 0.0 429.2220936505875 0.0 429.2220936505875 0.0 0.4843018683984965 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3054621874040891 YR[{M(Oxidation (M))|F}V]{I|L} 2.2472 - 188 1 2.399 64911.4 1.0 1170 3170 4341 DOHH2_400M_050219_1,4342 DOHH2_400M_050219_1,4342,LQRQPQPFL False False QIRPDRQTL 22.587457 376.215594470501 4474411.5 4341.0 ENST00000432525.5_1_22:38886367-38903636:-|nuORF;;ENST00000581551.1_1_17:62499042-62499524:-|nuORF;;nc|ENSG00000100201|Q92841-1|DDX17;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5;;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;;ENSG00000100201|ENST00000403230|DDX17;;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;;nc|ENSG00000100201|Q92841-3|DDX17;;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;;nc|ENSG00000100201|Q92841-2|DDX17 3.3419883251190186 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4343 22.591 164.0 467960.0 25 0 89799.0 + 7237 EESDLSRQY 9 98 563.7546752629163 1125.4947975926325 2 563.7550536990166 MULTI CID FTMS 0 0 0 4341 154420.46875 0.1339884088057067 2 -0.1275157928466797 2 Unmodified _EESDLSRQY_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 38.17557092003332 0.0854718145212029 1 EESD{I|L}SRQY 9 0 + 70.499 0.0 0.0 6.2639 6.2639 91.212 0.0 0.0 0.0 52.98077908162952 6.003049056090305 6.003049056090305 13.015384402724592 0 0.3054621874040891 2.0 0.0 0.7302046884880937 + + EESD{I|L}SRQY;EESD{I|L}SR[AG]Y;[DP]PRS{I|L}DS[HC];EE{[C(Carbamidomethyl (C))G]|[NC]}[KG]RQY;{[MG]|[TS]}[H{I|L}]N{I|L}DS[HC];{[MG]|[TS]}[H{I|L}]GG{I|L}DS[HC] 6.2639;5.1074;4.1576;2.7324;2.0429;0.91814 +;-;-;-;-;- + 241 + 1 2.399 63815.2 1.0 1171 3170 4341 DOHH2_400M_050219_1,4343 DOHH2_400M_050219_1,4343,EESDLSRQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4344 22.592 43.0 1528600.0 25 0 90978.0 + -1 AGADHIITM 9 121 472.7291863365124 943.4438197398248 2 472.7291137576103 MULTI CID FTMS 0 0 0 4341 780680.5625 0.9483578102070964 1 -0.0721607208251953 3 Oxidation (M) _AGADHIITM(Oxidation (M))_ ENSG00000147224|ENST00000372435|PRPS1;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;ENSG00000229937|ENST00000506618|PRPS1L1;ENSG00000101911|ENST00000380668|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1;nc|ENSG00000101911|P11908-2|PRPS2 21.74664581756881 0.2544899275067181 1 {[YC]|[HE]}{I|L}{I|L}{[QG]|[NA]}T{M(Oxidation (M))|F} 8 -1 + 34.442 0.0 0.0 3.6507 3.6507 74.914 0.0 0.0 0.0 15.02742745529708 8.05970632012567 8.05970632012567 4.771212547196619 0 0.0 0.0 0.3807196863200844 0.0 {[YC]|[HE]}{I|L}{I|L}{[QG]|[NA]}T{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}Q{[VA]|[{I|L}G]}T{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}AG{[VA]|[{I|L}G]}T{M(Oxidation (M))|F};[H{I|L}]{[DA]|[EG]}Q{I|L}T{M(Oxidation (M))|F};[H{I|L}]{[DA]|[EG]}GA{I|L}T{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}[YQ]A{I|L}T{M(Oxidation (M))|F};[H{I|L}]{[QS]|[NT]}A{I|L}E{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A{I|L}T{M(Oxidation (M))|F};[HK]EAA{I|L}E{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WE]KT{M(Oxidation (M))|F} 3.6507;3.145;2.9358;2.0686;1.8595;1.3226;1.2224;0.95506;0.60666;0.53326 -;-;-;-;-;-;-;-;-;- 190 + 1 2.399 58699.4 1.0 1172 3170 4341 DOHH2_400M_050219_1,4344 DOHH2_400M_050219_1,4344,AGADHIITM False False AGADHIITM 22.591884 472.72911375761 5083773.5 4341.0 ENSG00000147224|ENST00000372435|PRPS1;;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;;ENSG00000229937|ENST00000506618|PRPS1L1;;ENSG00000101911|ENST00000380668|PRPS2;;nc|ENSG00000147224|P60891-2|PRPS1;;nc|ENSG00000101911|P11908-2|PRPS2 5.074724992116292 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4345 22.596 200.0 266360.0 25 0 12444.0 + 6759 EDVETSKKW 9 87 561.2770184072175 1120.539483881235 2 561.2774536013603 MULTI CID FTMS 0 0 0 4341 243399.40625 0.8517516734509445 -1 0.0741252899169921 4 Unmodified _EDVETSKKW_ ENSG00000107223|ENST00000224073|EDF1;nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1 57.72198328787511 0.0273433238377839 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VET[KS]KW 9 0 + 47.113 0.0 0.0 4.2045 4.2045 72.525 0.0 0.0 0.0 35.99895739657265 14.09256854528806 14.09256854528806 1.4612803567823818 0 1.274227503252014 0.0 0.4247425010840047 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VET[KS]KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VES[KT]KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WE][KT]KW;{[CT]|[{M(Oxidation (M))|F}G]}[HM]T[KS]KW;{[CT]|[{M(Oxidation (M))|F}G]}[HM]S[KT]KW;KK[YQ]T[HM]W;{[CT]|[{M(Oxidation (M))|F}G]}K[KS]T{[{M(Oxidation (M))|F}C]|[YS]}{[CT]|[{M(Oxidation (M))|F}G]};{[CT]|[{M(Oxidation (M))|F}G]}K[KT]S{[{M(Oxidation (M))|F}C]|[YS]}{[CT]|[{M(Oxidation (M))|F}G]} 4.2045;4.0741;1.4003;1.3268;1.1964;0.70831;0.30357;0.17316 +;-;-;-;-;-;-;- + 178 + 1 2.399 50113.2 1.0 1173 3170 4341 DOHH2_400M_050219_1,4345 DOHH2_400M_050219_1,4345,EDVETSKKW True True EDVETSKKW 22.595707 561.27745360136 1309854.625 4341.0 ENSG00000107223|ENST00000224073|EDF1;;nc|ENSG00000107223|O60869-2|EDF1;;nc|ENSG00000107223|O60869-3|EDF1 6.219939231872559 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4346 22.598 94.0 435970.0 25 0 78854.0 7302 EEVKHMKIL 9 65 563.8201072689681 1125.625661604736 2 563.8204833865166 MULTI CID FTMS 0 0 0 4341 230868.015625 0.8146579909802679 1 -0.0721607208251953 5 Unmodified _EEVKHMKIL_ ENST00000443361.1_1_9:108287957-108288044:+|nuORF 4.75600775471527 0.7486543447549536 1 {I|L} 1 8 11.42 0.0 0.0 1.0145 0.0 0.0 994.5306889258284 0.0 994.5306889258284 0.0 4.430283238465815 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0145 + + 24 + 1 2.399 36073.7 1.0 1174 3170 4341 DOHH2_400M_050219_1,4346 DOHH2_400M_050219_1,4346,EEVKHMKIL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4347 22.601 179.0 341830.0 25 0 25693.0 + 2482 AQYEEIAQR 9 91 554.2728123877248 1106.5310718422495 2 554.2743408083916 MULTI CID FTMS 0 0 0 4341 183271.921875 0.517072823870037 -1 0.0741252899169921 6 Unmodified _AQYEEIAQR_ CON__ENSEMBL:ENSBTAP00000038253;CON__P02538;CON__P04259;CON__P19013;CON__P35908;CON__P35908v2;CON__P48668;ENSG00000170465|ENST00000252250|KRT6C;ENSG00000170477|ENST00000551956|KRT4;ENSG00000172867|ENST00000309680|KRT2;ENSG00000185069|ENST00000332411|KRT76;ENSG00000185479|ENST00000252252|KRT6B;ENSG00000205420|ENST00000330722|KRT6A;ENST00000553087.1_1_12:52864282-52865086:-|nuORF 29.84058131909904 0.1515068451768857 1 YEE{I|L}AQR 7 2 40.75 0.0 0.0 3.6826 0.0 0.0 199.0894217923177 0.0 199.0894217923177 0.0 26.770176890999267 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + YEE{I|L}AQR 3.6826 + + 113 + 1 2.399 49435.1 1.0 1175 3170 4341 DOHH2_400M_050219_1,4347 DOHH2_400M_050219_1,4347,AQYEEIAQR False True AQYEEIAQR 22.601247 554.274340808392 1834357.75 4341.0 ENSG00000185479|ENST00000252252|KRT6B;;P02538;;ENST00000553087.1_1_12:52864282-52865086:-|nuORF;;P48668;;ENSG00000170465|ENST00000252250|KRT6C;;P35908v2;;ENSG00000170477|ENST00000551956|KRT4;;ENSEMBL:ENSBTAP00000038253;;P04259;;ENSG00000205420|ENST00000330722|KRT6A;;ENSG00000172867|ENST00000309680|KRT2;;P35908;;P19013;;ENSG00000185069|ENST00000332411|KRT76 5.564201354980469 2.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 4348 22.615 800.0 99999.0 25 0 22404.0 + 45432 YTDHQNSSSYY 11 99 682.773288699871 1363.532024466542 2 682.7733032107353 MULTI CID FTMS 0 0 0 4341 175391.828125 0.2310003942105298 2 -0.1275157928466797 7 Unmodified _YTDHQNSSSYY_ ENSG00000125398|ENST00000245479|SOX9 57.24910588100465 0.0803095280301687 1 WQNSSSYY 8 4 71.579 0.0 0.0 5.2496 0.0 0.0 330.1294422834 0.0 330.1294422834 0.0 40.86610056368244 0.0 0.0 0 0.9247425010840048 0.0 1.924742501084005 0.3494850021680094 WQNSSSYY 5.2496 - 1455 1 2.399 63936.3 0.699999988079071 1176 3170 4341 DOHH2_400M_050219_1,4348 DOHH2_400M_050219_1,4348,YTDHQNSSSYY True True YTDHQNSSSYY 22.615084 682.773303210735 8883917.0 4341.0 ENSG00000125398|ENST00000245479|SOX9 7.966029326121013 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4349 22.62 254.0 255200.0 25 0 44306.0 + 16598 KDVDGAYMT 9 107 500.2279215515325 998.441290169865 2 500.2270080447197 MULTI CID FTMS 0 0 0 4341 166873.921875 1.0 0 0.0 8 Unmodified _KDVDGAYMT_ CON__P04264;ENSG00000167768|ENST00000252244|KRT1 32.78568957990786 0.1150597335874693 1 [TA]A[DV]QYMT 9 5 [TA]A[DV]QY + + 26.766 2.9538 0.39471 2.6808 2.6808 49.815 0.0 0.0 0.0 0.0 15.228246962099792 0.0 0.0 0 0.5 0.0 0.7302046884880938 0.0 [TA]A[DV]QYMT 2.6808 - 132 + 1 2.399 54173.7 1.0 1177 3170 4341 DOHH2_400M_050219_1,4349 DOHH2_400M_050219_1,4349,KDVDGAYMT True True KDVDGAYMT 22.619803 500.22700804472 748878.5 4341.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 2.4643885294596357 2.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 4350 22.624 231.0 525290.0 25 0 96866.0 + 521 AEHPELRSY 9 95 367.84932390719706 1100.5261423217912 3 367.8490173220634 MULTI CID FTMS 0 0 0 4341 158579.515625 0.4254647540190535 -1 0.0741252899169921 9 Unmodified _AEHPELRSY_ ENSG00000136193|ENST00000242059|SCRN1;nc|ENSG00000136193|Q12765-2|SCRN1;nc|ENSG00000136193|Q12765-3|SCRN1 17.11289562659939 0.3734572693229295 1 G{I|L}EP[{M(Oxidation (M))|F}T]A 7 8 40.974 0.0 0.0 3.7231 0.0 0.0 367.181444236525 0.0 367.181444236525 0.0 29.379938467179727 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 G{I|L}EP[{M(Oxidation (M))|F}T]A 3.7231 - 113 1 2.399 101898.4 1.0 1178 3170 4341 DOHH2_400M_050219_1,4350 DOHH2_400M_050219_1,4350,AEHPELRSY False True AEHPELRSY 22.62413 367.849017322063 3161153.875 4341.0 nc|ENSG00000136193|Q12765-3|SCRN1;;nc|ENSG00000136193|Q12765-2|SCRN1;;ENSG00000136193|ENST00000242059|SCRN1 5.01810089747111 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4351 22.628 228.0 230640.0 25 0 18991.0 + -1 RFSHHGMPA 9 94 528.2441926818651 1054.47383243053 2 528.2449828982353 MULTI CID FTMS 0 0 0 4341 83085.9453125 1.0 0 0.0 10 Oxidation (M) _RFSHHGM(Oxidation (M))PA_ REV__nc|ENSG00000131233|P57773-2|GJA9 7.910154910731844 0.6385446671287552 1 {[QS]|[NT]}[DV]MKQGY 9 -1 + 23.879 0.0 0.0 2.2645 2.2645 77.434 0.0 0.0 0.0 10.622600263328298 14.973024840566469 10.622600263328298 9.208187539523752 0 0.0 0.0 0.0 0.4247425010840047 {[QS]|[NT]}[DV]MKQGY;{[QS]|[NT]}[DV]MK[AG]GY;{[QS]|[NT]}RR{[C(Carbamidomethyl (C))E]|[WC]}GY 2.2645;1.3913;0.67456 -;-;- 179 + 1 2.399 49546.0 1.0 1179 3170 4341 DOHH2_400M_050219_1,4351 DOHH2_400M_050219_1,4351,RFSHHGMPA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4352 22.631 99.0 622150.0 25 0 64239.0 + 27605 PLEFSFAY 8 101 487.2383827634875 0 487.2384216189384 PEAK CID FTMS 0 0 0 4341 426473.40625 0.9347849569419338 -4 0.274881362915039 11 Unmodified _PLEFSFAY_ REV__ENSG00000113369|ENST00000265138|ARRDC3 5.760428011301431 0.5786759180849727 1 A 1 -1 0.48455 0.0 0.0 0.049827 0.0 0.0 791.3879155740469 107.0144289606078 898.4023445346547 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.049827 + + 2 + 1 2.399 52309.2 1.0 1180 3170 4341 DOHH2_400M_050219_1,4352 DOHH2_400M_050219_1,4352,PLEFSFAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4353 22.64 527.0 112250.0 25 0 4241.0 -1 MFWSCIMCHCL 11 101 526.2008390585358 1575.5806877758073 3 526.2009765505791 MULTI CID FTMS 0 0 0 4341 116865.8984375 1.0 0 0.0 12 3 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))FWSC(Carbamidomethyl (C))IM(Oxidation (M))C(Carbamidomethyl (C))HC(Carbamidomethyl (C))L_ ENST00000373304.3_1_X:77528630-77528690:-|nuORF 0.0948413911109767 0.8747004676205551 1 PY 2 -1 18.583 0.0 0.0 1.1795 0.0 0.0 1297.450749910877 0.0 1297.450749910877 0.0 6.365006360318688 0.0 0.0 0 0.0 0.0 0.0 0.0 PY 1.1795 - 80 + 1 2.399 54820.3 1.0 1181 3170 4341 DOHH2_400M_050219_1,4353 DOHH2_400M_050219_1,4353,MFWSCIMCHCL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4354 22.655 800.0 241340.0 25 0 10140.0 25986 NLSAYFERAAD 11 165 628.7986520749382 1255.5827512166763 2 628.7984496951103 MULTI CID FTMS 0 0 0 4341 113224.6875 0.6934494852943498 -2 0.1822147369384765 13 Unmodified _NLSAYFERAAD_ ENSG00000108861|ENST00000226004|DUSP3;nc|ENSG00000108861|P51452-2|DUSP3 34.93206674587334 0.2904649469012649 1 [AG]KEYAC(Carbamidomethyl (C))[KC]VQ 11 10 + 38.332 0.0 0.0 3.0529 3.0529 68.901 0.0 0.0 0.0 2.711416637330558 5.294308305677042 2.711416637330558 1.249387366082999 0 1.010638087671366 1.154901959985743 0.2887254899964357 0.7302046884880938 [AG]KEYAC(Carbamidomethyl (C))[KC]VQ;[AG]KEYA{NN|[MP]|[D{I|L}]|[EV]}YVQ;[KS]CKS{[CA]|SS}YA[PA]Q;[KQ]EYAC(Carbamidomethyl (C))[KC]VQ;[KQ]EYA{NN|[MP]|[D{I|L}]|[EV]}YVQ;[KS]CK{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YA[PA]Q;[AG]K{M(Oxidation (M))|F}QRC(Carbamidomethyl (C))YVQ;[AG]{M(Oxidation (M))|F}QQRC(Carbamidomethyl (C))YVQ;[AG]KEYARHH{[MG]|[TS]};[AG]KE{[QN]|[E{I|L}]|[KN]}[YG]YVQ 3.0529;2.9534;2.837;2.6625;2.5629;2.4995;2.4348;2.3917;2.249;2.0833 -;-;-;-;-;-;-;-;-;- 8212 1 2.399 144115.0 0.5799999833106995 1182 3170 4341 DOHH2_400M_050219_1,4354 DOHH2_400M_050219_1,4354,NLSAYFERAAD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4356 22.66 22.0 2010700.0 25 0 190790.0 + 4785 DENGKISRL 9 69 516.277825059786 1030.541097186372 2 516.2780029177666 MULTI CID FTMS 0 0 0 4355 1914856.75 0.2776642225795312 2 -0.0910568237304687 1 Unmodified _DENGKISRL_ ENSG00000143947|ENST00000272317|RPS27A;ENST00000591758.1_1_16:61089351-61089522:-|nuORF 32.037481411007896 0.1235546156350648 1 DENGK{I|L} 6 3 75.38 0.0 0.0 7.3146 0.0 0.0 0.0 371.2050875299438 371.2050875299438 69.89577516576787 0.0 0.0 0.0 0 0.75 2.0 0.4247425010840047 0.4247425010840047 + DENGK{I|L} 7.3146 + + 48 + 1 2.399 39084.6 1.0 1183 3171 4355 DOHH2_400M_050219_1,4356 DOHH2_400M_050219_1,4356,DENGKISRL True True DENGKISRL 22.659617 516.278002917767 31586850.0 4355.0 ENST00000591758.1_1_16:61089351-61089522:-|nuORF;;ENSG00000143947|ENST00000272317|RPS27A 5.905594031016032 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4357 22.661 26.0 2286400.0 25 0 331570.0 + 36938 TEVTGHRW 8 70 493.2460561252528 984.4775593173056 2 493.2460815310478 MULTI CID FTMS 0 0 0 4355 2130853.75 1.0 0 0.0 2 Unmodified _TEVTGHRW_ chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;ENSG00000172270|ENST00000333511|BSG;ENST00000576925.3_1_19:572634-579657:+|nuORF;nc|ENSG00000172270|P35613-2|BSG 37.97399986684836 0.2681860861828418 1 {[TV]|[{I|L}S]}E[QP]TV[DP] 9 7 + 40.206 0.0 0.0 4.084 4.084 70.75 0.0 0.0 0.0 0.3070408279229397 19.237122745997475 0.3070408279229397 0.4575749056067479 0 0.5 0.958607314841775 0.4247425010840047 0.0 {[TV]|[{I|L}S]}E[QP]TV[DP];{[TV]|[{I|L}S]}E[PA]GTV[DP];{[TV]|[{I|L}S]}E[PG]ATV[DP];{[ET]|[MV]}V[QP]TV[DP];{[ET]|[MV]}V[PA]GTV[DP];{[ET]|[MV]}V[PG]ATV[DP];{[TV]|[{I|L}S]}[HN][R{M(Oxidation (M))|F}][DP] 4.084;4.0375;3.8891;3.3526;3.3061;3.1577;1.1171 -;-;-;-;-;-;- 193 1 2.399 51774.1 1.0 1184 3171 4355 DOHH2_400M_050219_1,4357 DOHH2_400M_050219_1,4357,TEVTGHRW False True TEVTGHRW 22.660794 493.246081531048 22299450.0 4355.0 ENSG00000172270|ENST00000333511|BSG;;chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;;ENST00000576925.3_1_19:572634-579657:+|nuORF;;nc|ENSG00000172270|P35613-2|BSG 7.543076674143474 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4358 22.666 270.0 278960.0 25 0 42266.0 + 522 AEHPELRSY 9 85 551.2700070503427 1100.5254611674852 2 551.2703124880791 MULTI CID FTMS 0 0 0 4355 217700.0 0.964652019965184 -1 0.0721607208251953 3 Unmodified _AEHPELRSY_ ENSG00000136193|ENST00000242059|SCRN1;nc|ENSG00000136193|Q12765-2|SCRN1;nc|ENSG00000136193|Q12765-3|SCRN1 31.26834338654808 0.1333407332142048 1 {[CP]|[EA]}HPE[R{I|L}]SY 9 0 + 36.264 0.0 0.0 3.2952 3.2952 83.355 0.0 0.0 0.0 20.334325749709528 2.183882175068497 2.183882175068497 30.61243137115874 0 0.7614393726401688 0.0 0.4247425010840047 0.0 + + {[CP]|[EA]}HPE[R{I|L}]SY;{[MS]|[{M(Oxidation (M))|F}A]}{[ES]|[DT]|[{I|L}C]}E[R{I|L}]SY 3.2952;0.51355 +;- + 65 + 1 2.399 62882.1 1.0 1185 3171 4355 DOHH2_400M_050219_1,4358 DOHH2_400M_050219_1,4358,AEHPELRSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4359 22.671 293.0 405420.0 25 0 40489.0 -1 0 142 383.2403512227037 764.4661495122074 2 383.2399169802666 MULTI CID FTMS 0 0 0 4355 201927.390625 0.7159684129325748 -1 0.0721607208251953 4 1 N{I|L}{I|L}{I|L}HR 6 -1 + 78.37 0.0 0.0 10.252 10.252 99.761 0.0 0.0 0.0 61.46357089064863 20.13940930942276 20.13940930942276 78.36971154529144 0 0.4247425010840047 2.0 0.0 0.8996498648046141 N{I|L}{I|L}{I|L}HR 10.252 - 71 + 1 2.399 95509.2 1.0 1186 3171 4355 DOHH2_400M_050219_1,4359 DOHH2_400M_050219_1,4359, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4360 22.677 329.0 224470.0 25 0 16865.0 + 29915 QSEVESTEY 9 110 536.227531145494 1070.440509357788 2 536.2278320193291 MULTI CID FTMS 0 0 0 4355 198118.703125 1.0 0 0.0 5 Unmodified _QSEVESTEY_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 68.08070601005525 0.0218408846571049 1 {[QS]|[NT]}EVE 5 4 23.189 0.0 0.0 2.1663 0.0 0.0 0.0 495.1721127115568 495.1721127115568 3.179504309505056 0.0 0.0 0.0 0 0.0 0.0 1.1624379954164592 1.1230360320760422 + {[QS]|[NT]}EVE 2.1663 + + 204 1 2.399 59598.8 1.0 1187 3171 4355 DOHH2_400M_050219_1,4360 DOHH2_400M_050219_1,4360,QSEVESTEY True True QSEVESTEY 22.677144 536.2281 903923.25 4355.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 5.523731549580892 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4361 22.691 800.0 81846.0 25 0 4214.6 -1 FRCQCPAGGAF 11 105 635.7759815219742 1269.5374101107484 2 635.7761108279228 MULTI CID FTMS 0 0 0 4355 124559.2578125 0.2434676021457469 2 -0.0910568237304687 6 2 Carbamidomethyl (C) _FRC(Carbamidomethyl (C))QC(Carbamidomethyl (C))PAGGAF_ ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3 13.042465956692816 0.7638483625850725 1 [NP]HDEAQQNA{M(Oxidation (M))|F} 11 -1 + 83.687 0.0 0.0 6.5919 6.5919 85.011 0.0 0.0 0.0 4.801477093498505 16.575773191777927 4.801477093498505 4.801477093498505 0 0.8807196863200843 0.8860566476931632 0.7059771852360797 0.4247425010840047 [NP]HDEAQQNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};[NP]HDEA[AG]QNA{M(Oxidation (M))|F};[NP]HDEAQQGGA{M(Oxidation (M))|F};[NP]HDEAQ[AG]NA{M(Oxidation (M))|F};[AG]S[{M(Oxidation (M))|F}T]EAQQNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F} 6.5919;6.2137;6.1969;5.8729;5.8729;5.8729;5.8254;5.4971;5.4971;5.4971 -;-;-;-;-;-;-;-;-;- 947 1 2.399 52616.4 0.6000000238418579 1188 3171 4355 DOHH2_400M_050219_1,4361 DOHH2_400M_050219_1,4361,FRCQCPAGGAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4362 22.703 695.0 162320.0 25 0 11725.0 + 801 AESPAGHSF 9 149 451.7037879525353 901.3930229718708 2 451.7039062380791 MULTI CID FTMS 0 0 0 4355 122361.484375 0.063025725770853 3 -0.1330165863037109 7 Unmodified _AESPAGHSF_ ENSG00000136699|ENST00000680298|SMPD4;ENST00000438378.2_1_2:132275414-132277996:+|nuORF;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;nc|ENSG00000136699|Q9NXE4-10|SMPD4;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4-5|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;nc|ENSG00000136699|Q9NXE4-7|SMPD4;nc|ENSG00000136699|Q9NXE4-8|SMPD4;nc|ENSG00000136699|Q9NXE4-9|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4 43.85829265575387 0.0542763391141878 1 {[CP]|[EA]}SPQH{M(Oxidation (M))|F}S 8 4 + 49.613 0.0 0.0 5.5041 5.5041 76.923 0.0 0.0 0.0 5.484550065040281 6.686400898169147 5.484550065040281 1.3033376849500655 0 0.8252574989159953 0.0 1.214559192431053 0.0 {[CP]|[EA]}SPQH{M(Oxidation (M))|F}S;{[CP]|[EA]}SPAGH{M(Oxidation (M))|F}S;{[CP]|[EA]}SPQHS{M(Oxidation (M))|F};{[CP]|[EA]}SPAGHS{M(Oxidation (M))|F};{[CP]|[EA]}SPQHAY;{[CP]|[EA]}SPAGHAY;{[CP]|[EA]}SPQ{[QN]|[E{I|L}]|[KN]}E;{[CP]|[EA]}SPAG{[QN]|[E{I|L}]|[KN]}E;{[CP]|[EA]}SP[NP][C(Carbamidomethyl (C))K];{[CP]|[EA]}SPA[HQ]Y 5.5041;5.3595;4.7623;4.6177;3.7379;3.5933;2.9022;2.7576;2.4293;1.9917 -;-;-;+;-;-;-;-;-;- + 569 + 1 2.399 92317.9 1.0 1189 3171 4355 DOHH2_400M_050219_1,4362 DOHH2_400M_050219_1,4362,AESPAGHSF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4363 22.71 400.0 138620.0 25 0 26532.0 + 43777 YELDEESRRKY 11 75 496.5759290693823 1486.705957808347 3 496.5755493044853 MULTI CID FTMS 0 0 0 4355 82512.7109375 0.8323106656868559 1 -0.0553550720214843 8 Unmodified _YELDEESRRKY_ ENSG00000068654|ENST00000263857|POLR1A 7.429076235409084 0.8400970696663368 1 YE 2 9 49.464 0.0 0.0 3.3271 0.0 0.0 0.0 1191.5758548318245 1191.5758548318245 33.20489028679166 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + YE 3.3271 + + 30 + 1 2.399 47788.8 1.0 1190 3171 4355 DOHH2_400M_050219_1,4363 DOHH2_400M_050219_1,4363,YELDEESRRKY False True YELDEESRRKY 22.710184 496.2416 671658.625 4355.0 ENSG00000068654|ENST00000263857|POLR1A 3.729024569193522 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4365 22.715 46.0 1024000.0 25 0 69858.0 + 7290 EEVHDLERKY 10 66 439.88621103309566 1316.636803699487 3 439.8860961794853 MULTI CID FTMS 0 0 0 4364 859270.875 0.1262913314810075 3 -0.0979881286621093 1 Unmodified _EEVHDLERKY_ ENSG00000187109|ENST00000618691|NAP1L1;ENSG00000205531|ENST00000380542|NAP1L4;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000205531|Q99733-2|NAP1L4 30.7034409873982 0.2788461460996952 1 EEVHD{I|L}E[RK]Y 10 0 + 56.336 0.0 0.0 4.2788 4.2788 85.406 0.0 0.0 0.0 35.85138771613167 13.283861622707818 13.283861622707818 20.696664623252687 0 0.7742275032520141 1.0969100130080565 0.0 0.0 + + EEVHD{I|L}E[RK]Y;[HV][KT]E{I|L}DHV[HC];{[TV]|[{I|L}S]}[HK]E{I|L}DHV[HC];[HV][KT]{[HG]|PP}YHV[HC];{[TV]|[{I|L}S]}[HK]{[HG]|PP}YHV[HC] 4.2788;2.7068;2.0075;1.8005;1.1011 +;-;-;-;- + 85 + 1 2.399 43288.9 1.0 1191 3172 4364 DOHH2_400M_050219_1,4365 DOHH2_400M_050219_1,4365,EEVHDLERKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4366 22.72 278.0 229680.0 25 0 24620.0 + 7292 EEVHDLERKY 10 56 659.3255136400954 1316.6364743469908 2 659.3256713747978 MULTI CID FTMS 0 0 0 4364 226751.59375 0.1342346738601343 3 -0.0979881286621093 2 Unmodified _EEVHDLERKY_ ENSG00000187109|ENST00000618691|NAP1L1;ENSG00000205531|ENST00000380542|NAP1L4;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000205531|Q99733-2|NAP1L4 61.08992128646608 0.0337271188422265 1 EEVHD{I|L}ERKY 10 0 + 77.0 0.0 0.0 5.8482 5.8482 90.661 0.0 0.0 0.0 55.80198135264581 10.764837301042718 10.764837301042718 17.47425010840047 0 1.4604093769761874 1.6989700043360187 0.0 0.0 + + EEVHD{I|L}ERKY;EEVHD{I|L}K[YV]W;[HV][KT]E{I|L}DHV[HC];{[ET]|[MV]}[HV]K{I|L}DHV[HC];[HD][{I|L}T]K{I|L}DHV[HC];[QA]{[SA]|[TG]}HD{I|L}E[VG]KY 5.8482;4.521;3.1391;3.126;2.9923;2.7887 +;-;-;-;-;- + 147 + 1 2.399 55784.4 1.0 1192 3172 4364 DOHH2_400M_050219_1,4366 DOHH2_400M_050219_1,4366,EEVHDLERKY True True EEVHDLERKY 22.720104 659.325671374798 85842372.0 4364.0 ENST00000549988.5_1_12:76453547-76478450:-|nuORF;;nc|ENSG00000187109|P55209-3|NAP1L1;;nc|ENSG00000205531|Q99733-2|NAP1L4;;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;;ENSG00000187109|ENST00000618691|NAP1L1;;nc|ENSG00000187109|P55209-2|NAP1L1;;ENSG00000205531|ENST00000380542|NAP1L4 9.601235707600912 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4367 22.723 125.0 237590.0 25 0 13816.0 + -1 AESFDWVMAW 10 66 629.266746696161 1256.518940459122 2 629.2667114138603 MULTI CID FTMS 0 0 0 4364 300464.1875 1.0 0 0.0 3 Oxidation (M) _AESFDWVM(Oxidation (M))AW_ REV__ENSG00000170604|ENST00000302165|IRF2BP1 7.289230182591677 0.6929195370588109 1 YA[C(Carbamidomethyl (C))H] 4 -1 13.188 0.0 0.0 1.0495 0.0 0.0 707.322069236525 0.0 707.322069236525 0.0 0.9691001300805624 0.0 0.0 0 0.0 0.0 0.0 0.0 YA[C(Carbamidomethyl (C))H] 1.0495 - 62 1 2.399 29230.7 1.0 1193 3172 4364 DOHH2_400M_050219_1,4367 DOHH2_400M_050219_1,4367,AESFDWVMAW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4368 22.73 422.0 150440.0 25 0 20229.0 + 23435 LTEVNKAGTQY 11 97 612.3171882829882 1222.6198236327764 2 612.3188354372978 MULTI CID FTMS 0 0 0 4364 181445.015625 0.1250126923750669 3 -0.0979881286621093 4 Unmodified _LTEVNKAGTQY_ ENSG00000170542|ENST00000380698|SERPINB9 65.47368725323818 0.0469305343733202 1 [{I|L}T]EVNK[QT]QY 10 2 + 70.099 0.0 0.0 5.7335 5.7335 86.197 0.0 0.0 0.0 53.79097130107314 5.260847058321687 5.260847058321687 9.164539485499256 0 0.805462187404089 2.0 0.3807196863200844 1.1861818737241734 [{I|L}T]EVNK[QT]QY;[{I|L}T]EVGGK[QT]QY;[{I|L}T]EVNK[QT][AG]Y;[{I|L}T]{[TV]|[{I|L}S]}[HD]NVE[VP];[{I|L}T][HT][DV]NVE[VP];[{I|L}T]EVN[HD][{I|L}V][PS];[{I|L}T]EVN[DV][H{I|L}][PS];[VP]QQ[DV]NVE[VP];[DP]P[QT]KNVE[VP];[{I|L}T][WR][TA]HN[QP] 5.7335;4.9839;4.6725;4.5874;4.3412;4.1237;3.8775;3.5118;2.853;2.8205 -;-;-;-;-;-;-;-;-;- 471 + 1 2.399 54868.7 1.0 1194 3172 4364 DOHH2_400M_050219_1,4368 DOHH2_400M_050219_1,4368,LTEVNKAGTQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4369 22.737 386.0 237040.0 25 0 22819.0 + 5399 DLKTSREL 8 104 481.2697204345157 960.5248879358312 2 481.2698242068291 MULTI CID FTMS 0 0 0 4364 100203.2890625 0.3972473153794111 -2 0.1275157928466797 5 Unmodified _DLKTSREL_ ENSG00000136603|ENST00000259119|SKIL;ENST00000490894.1_1_3:170102333-170102591:+|nuORF;nc|ENSG00000136603|P12757-5|SKIL 30.63653989081413 0.3996269429323407 1 D{I|L}KT 4 4 65.79 0.0 0.0 6.8494 0.0 0.0 0.0 500.2484224908813 500.2484224908813 55.07638152291939 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.8494850021680094 0.4247425010840047 + D{I|L}KT 6.8494 + + 216 + 1 2.399 70708.7 1.0 1195 3172 4364 DOHH2_400M_050219_1,4369 DOHH2_400M_050219_1,4369,DLKTSREL False True DLKTSREL 22.737134 481.27 999943.625 4364.0 nc|ENSG00000136603|P12757-5|SKIL;;ENSG00000136603|ENST00000259119|SKIL;;ENST00000490894.1_1_3:170102333-170102591:+|nuORF 2.975182096163432 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4370 22.746 495.0 148760.0 25 0 12651.0 -1 0 109 548.2912747674399 547.2839983008398 1 548.2913085818291 MULTI CID FTMS 0 0 0 4364 155481.671875 0.2467849935846194 -93 2.2226505279541016 6 1 Y 1 -1 11.594 0.0 0.0 2.1184 0.0 0.0 366.20974705747886 0.0 366.20974705747886 0.0 2.0411998265592484 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.1184 - 14 + 1 2.399 61310.9 1.0 1196 3172 4364 DOHH2_400M_050219_1,4370 DOHH2_400M_050219_1,4370, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4372 22.764 800.0 122310.0 25 0 24334.0 + 29309 QIKQKVDSL 9 118 529.8138628910046 1057.6131728488092 2 529.8143798708916 MULTI CID FTMS 0 0 0 4371 58787.15234375 0.6154400649860395 1 -0.0419597625732421 1 Unmodified _QIKQKVDSL_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000553444.1_1_14:21679384-21680083:-|nuORF;ENST00000556181.1_1_14:58988389-58988443:+|nuORF;ENST00000571636.1_1_16:11336795-11337332:+|nuORF;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 28.49450938151212 0.1686335738423394 1 [Q{I|L}]KQ 4 5 30.696 0.0 0.0 2.9024 0.0 0.0 0.0 557.2949923150999 557.2949923150999 18.47754736113256 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3494850021680094 + [Q{I|L}]KQ 2.9024 + + 104 + 1 2.403 79629.9 0.5099999904632568 1197 3173 4371 DOHH2_400M_050219_1,4372 DOHH2_400M_050219_1,4372,QIKQKVDSL False True QIKQKVDSL 22.763583 529.814379870892 418200.46875 4371.0 nc|ENSG00000092199|P07910-3|HNRNPC;;nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;ENSG00000179172|ENST00000317869|HNRNPCL1;;ENSG00000277058|ENST00000617807|HNRNPCL3;;ENSG00000275774|ENST00000621994|HNRNPCL2;;ENST00000553444.1_1_14:21679384-21680083:-|nuORF;;nc|ENSG00000092199|P07910|HNRNPC;;ENST00000556181.1_1_14:58988389-58988443:+|nuORF;;ENST00000571636.1_1_16:11336795-11337332:+|nuORF;;ENSG00000179412|ENST00000323770|HNRNPCL4 3.872181415557861 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4373 22.768 244.0 266670.0 25 0 37506.0 + 43980 YIDENQDRY 9 73 608.2676277756977 1214.5207026181954 2 608.2676879763603 MULTI CID FTMS 0 0 0 4371 230332.34375 1.0 0 0.0 2 Unmodified _YIDENQDRY_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 47.594388314883695 0.0456443387682827 1 Y{I|L}DENQD[YR] 9 0 + 93.963 0.0 0.0 7.7366 7.7366 92.271 0.0 0.0 0.0 86.97289377609621 7.147642715192504 7.147642715192504 9.208187539523747 0 0.8807196863200843 2.0 0.4247425010840047 0.805462187404089 + + Y{I|L}DENQD[YR];Y{I|L}DEN[AG]D[YR];Y{I|L}DEGGQD[YR];Y{I|L}DEGG[AG]D[YR] 7.7366;6.9784;6.9784;6.2238 +;-;-;- + 112 + 1 2.403 51709.2 1.0 1198 3173 4371 DOHH2_400M_050219_1,4373 DOHH2_400M_050219_1,4373,YIDENQDRY True True YIDENQDRY 22.768152 608.26768797636 1222962.0 4371.0 ENSG00000133313|ENST00000324262|CNDP2;;nc|ENSG00000133313|Q96KP4-2|CNDP2;;ENST00000582620.5_1_18:72167208-72179735:+|nuORF 7.776958147684733 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4374 22.771 120.0 508000.0 25 0 127250.0 -1 ITTRWMKSLG 10 78 403.5536828932194 1207.6392192798585 3 403.5537292361259 MULTI CID FTMS 0 0 0 4371 219314.296875 1.0 0 0.0 3 Oxidation (M) _ITTRWM(Oxidation (M))KSLG_ ENST00000271651.7_1_1:150778678-150779241:-|nuORF 5.783430956126388 0.6998847395148697 1 M 1 -1 13.495 0.0 0.0 1.1175 0.0 0.0 1058.5879935491926 0.0 1058.5879935491926 0.0 5.179381089317516 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.1175 + + 24 + 1 2.403 49887.6 1.0 1199 3173 4371 DOHH2_400M_050219_1,4374 DOHH2_400M_050219_1,4374,ITTRWMKSLG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4375 22.78 544.0 243400.0 25 0 22256.0 + 605 AEKAVTKEEF 10 143 576.3020933115486 1150.589633689897 2 576.3022338747978 MULTI CID FTMS 0 0 0 4371 143877.640625 0.3655259829503201 -3 0.163217544555664 4 Unmodified _AEKAVTKEEF_ ENSG00000168028|ENST00000301821|RPSA;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 115.05908914016896 0.0010566098934358 1 AEKAVT 6 4 92.256 0.0 0.0 8.0181 0.0 0.0 0.0 548.2356328474908 548.2356328474908 39.947434950768695 0.0 0.0 0.0 0 1.555462187404089 1.6989700043360187 1.4802046884880935 0.4247425010840047 + AEKAVT 8.0181 + + 3330 + 1 2.403 101193.5 1.0 1200 3173 4371 DOHH2_400M_050219_1,4375 DOHH2_400M_050219_1,4375,AEKAVTKEEF True True AEKAVTKEEF 22.780196 576.302233874798 1997611.625 4371.0 nc|ENSG00000288920|A0A8I5KQE6|RPSA2;;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;;ENSG00000168028|ENST00000301821|RPSA 8.148090044657389 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4376 22.788 429.0 240610.0 25 0 18490.0 + 26425 NTDRPGGYSY 10 135 565.2490284736895 1128.4835040141788 2 565.2492553591728 MULTI CID FTMS 0 0 0 4371 130665.328125 0.2539505362290145 -3 0.163217544555664 5 Unmodified _NTDRPGGYSY_ ENST00000539639.5_1_12:123707622-123714920:-|nuORF 88.36371040165146 0.0102134265615327 1 {[QS]|[NT]}DR[PG]GYSY 10 0 + 73.209 0.0 0.0 6.4874 6.4874 80.938 0.0 0.0 0.0 11.997551772534756 14.146518864155126 11.997551772534756 1.7609125905568137 0 2.242992819099939 1.5228787452803376 0.6307196863200843 1.3098943791441968 + + {[QS]|[NT]}DR[PG]GYSY;{[QS]|[NT]}DR[NP]YSY;[AG]SDR[PG]GYSY;[AG]SDR[NP]YSY;{[QS]|[NT]}AP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GYSY;{[QS]|[NT]}AP[WQ]YSY;AAS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]GYSY;{[QS]|[NT]}AP[WY]QSY;[AG]T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]GYSY;AAS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[NP]YSY 6.4874;6.3313;5.4242;5.2643;5.1972;5.0411;4.8369;4.802;4.7447;4.677 +;-;-;-;-;-;-;-;-;- + 2291 1 2.403 80545.2 1.0 1201 3173 4371 DOHH2_400M_050219_1,4376 DOHH2_400M_050219_1,4376,NTDRPGGYSY True True NTDRPGGYSY 22.787848 565.249255359173 4937049.0 4371.0 ENST00000539639.5_1_12:123707622-123714920:-|nuORF 7.961949984232585 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4378 22.794 207.0 353260.0 25 0 30951.0 + 8505 ETDRGMSAEY 10 87 579.7400470958429 1157.4655412584857 2 579.7400390505791 MULTI CID FTMS 0 0 0 4377 347720.96875 0.1180848180420819 -4 0.2051773071289062 1 Unmodified _ETDRGMSAEY_ ENSG00000100347|ENST00000350028|SAMM50 41.95555342248728 0.1369168616057562 1 SAEY 4 6 48.716 0.0 0.0 4.2089 0.0 0.0 689.2801991193375 0.0 689.2801991193375 0.0 26.84447197927419 0.0 0.0 0 0.9247425010840048 0.0 1.2302046884880935 0.0 + SAEY 4.2089 + + 107 1 2.403 61732.8 1.0 1202 3174 4377 DOHH2_400M_050219_1,4378 DOHH2_400M_050219_1,4378,ETDRGMSAEY False True ETDRGMSAEY 22.794339 579.740039050579 44672898.0 4377.0 ENSG00000100347|ENST00000350028|SAMM50 5.735665957132976 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4379 22.808 800.0 112960.0 25 0 15549.0 -1 0 63 644.7779005225385 2575.082496223754 4 645.0289794802666 MULTI CID FTMS 0 0 0 4377 59658.734375 0.1017427015575418 6 -0.2569618225097656 2 1 Y 1 -1 15.485 0.0 0.0 0.60132 0.0 0.0 2394.0085501561744 0.0 2394.0085501561744 0.0 5.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.60132 - 18 + 1 2.403 74141.4 0.5299999713897705 1203 3174 4377 DOHH2_400M_050219_1,4379 DOHH2_400M_050219_1,4379, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4381 22.813 69.0 784060.0 25 0 83186.0 + 33009 SENPGQTHF 9 60 508.7254376752478 0 508.7253600955009 PEAK CID FTMS 0 0 0 4380 603874.75 0.4869922805996046 -2 0.062286376953125 1 Unmodified _SENPGQTHF_ ENSG00000005812|ENST00000355619|FBXL3 39.94969957227396 0.061964645358372 1 NP{[QG]|[NA]}T 5 4 26.51 0.0 0.0 2.6107 0.0 0.0 216.07549585655187 299.11493860416255 515.1904344607144 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.4247425010840047 + NP{[QG]|[NA]}T 2.6107 + + 28 + 1 2.403 51017.8 1.0 1204 3175 4380 DOHH2_400M_050219_1,4381 DOHH2_400M_050219_1,4381,SENPGQTHF True True SENPGQTHF 22.81296 508.725360095501 5974645.5 4380.0 ENSG00000005812|ENST00000355619|FBXL3 7.888782501220703 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4382 22.817 217.0 550360.0 25 0 55017.0 + + 20682 ILRSQKPVM 9 119 357.8834876642387 1070.6286335929162 3 357.8828307986259 MULTI CID FTMS 0 0 0 4380 228379.59375 0.9424725453004476 -1 0.0203266143798828 2 Unmodified _LLRKSQVPM_ ENSG00000108107|ENST00000344063|RPL28;ENST00000560583.5_1_19:55899571-55899697:+|nuORF;ENST00000412461.2_1_22:19043875-19044022:+|nuORF 13.90604991867851 0.4602628045680013 1 {I|L}T{M(Oxidation (M))|F}PP 5 -1 32.321 0.0 0.0 3.0189 0.0 0.0 0.0 512.2845553033811 512.2845553033811 15.203462667683944 0.0 0.0 0.0 0 0.1150219788552205 1.0457574905606752 0.0 0.0 {I|L}T{M(Oxidation (M))|F}PP 3.0189 - 429 + 1 2.403 102509.2 1.0 1205 3175 4380 DOHH2_400M_050219_1,4382 DOHH2_400M_050219_1,4382,LLRKSQVPM False False ILRSQKPVM 22.81706 357.882830798626 1451620.375 4380.0 ENSG00000108107|ENST00000344063|RPL28;;ENST00000560583.5_1_19:55899571-55899697:+|nuORF;;ENST00000412461.2_1_22:19043875-19044022:+|nuORF 2.790833592414856 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4383 22.823 313.0 227270.0 25 0 14583.0 -1 MKKMSNIY 8 114 536.7615422706072 1071.5085316080142 2 536.7617065310478 MULTI CID FTMS 0 0 0 4380 186551.5 0.8907997197023688 -1 0.0203266143798828 3 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))MKKM(Oxidation (M))SNIY_ ENSG00000196353|ENST00000429747|CPNE4;nc|ENSG00000196353|Q96A23-2|CPNE4 25.399314129420983 0.5099049743284904 1 VSDK 4 -1 36.86 0.0 0.0 3.44 0.0 0.0 0.0 639.2423189752561 639.2423189752561 10.607799220937508 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.0 0.0 VSDK 3.44 - 68 + 1 2.403 63051.5 1.0 1206 3175 4380 DOHH2_400M_050219_1,4383 DOHH2_400M_050219_1,4383,MKKMSNIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4384 22.829 340.0 153140.0 25 0 11131.0 + 19248 LEKDYEEVG 9 100 541.2564486649259 1080.4983443966516 2 541.2557250857353 MULTI CID FTMS 0 0 0 4380 157808.71875 1.0 0 0.0 4 Unmodified _LEKDYEEVG_ ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000530835.1_1_11:90016856-90017168:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C 19.361941925380144 0.3125782356748823 1 [YE]DEK{I|L}ER 8 7 + 38.81 0.0 0.0 3.5919 3.5919 72.822 0.0 0.0 0.0 3.0102999566398125 9.262137858390808 3.0102999566398125 3.0102999566398125 0 0.5 0.0 0.4247425010840047 0.0 [YE]DEK{I|L}ER;{[YD]|[{M(Oxidation (M))|F}M]}EEK{I|L}ER;[YE]DEKE{I|L}R;[YE]WW{I|L}ER;{[YD]|[{M(Oxidation (M))|F}M]}EEKE{I|L}R;EE{[YD]|[{M(Oxidation (M))|F}M]}K{I|L}ER;{[TV]|[{I|L}S]}P{[MG]|[TS]}YEER;[YE]WWE{I|L}R;EE{[YD]|[{M(Oxidation (M))|F}M]}KE{I|L}R;[VP]T{[MG]|[TS]}YEER 3.5919;3.3133;3.0347;2.9822;2.7561;2.6202;2.553;2.425;2.063;2.0466 -;-;-;-;-;-;-;-;-;- 391 1 2.403 48956.7 1.0 1207 3175 4380 DOHH2_400M_050219_1,4384 DOHH2_400M_050219_1,4384,LEKDYEEVG False True LEKDYEEVG 22.828942 541.255725085735 795266.4375 4380.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000127824|ENST00000248437|TUBA4A;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000167553|ENST00000301072|TUBA1C;;ENST00000530835.1_1_11:90016856-90017168:+|nuORF;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;ENSG00000167552|ENST00000301071|TUBA1A;;ENSG00000075886|ENST00000321253|TUBA3D;;ENSG00000198033|ENST00000400113|TUBA3C;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000198033|P0DPH7-2|TUBA3C;;nc|ENSG00000123416|P68363-2|TUBA1B;;nc|ENSG00000127824|P68366-2|TUBA4A 3.02101461092631 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4385 22.843 800.0 159100.0 25 0 18144.0 + 690 AENIQPGEQKY 11 110 638.8121233228461 1275.609693712492 2 638.8119994997978 MULTI CID FTMS 0 0 0 4380 121347.5078125 0.5407396708065461 -2 0.062286376953125 5 Unmodified _AENIQPGEQKY_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 104.48436234954404 0.0055741972225795 1 {[CP]|[EA]}N{I|L}QP{[DA]|[EG]}QKY 11 0 + 70.284 0.0 0.0 5.5098 5.5098 82.285 0.0 0.0 0.0 24.775040010370013 5.098823640725556 5.098823640725556 5.902898413084571 0 1.7059771852360797 0.0 0.805462187404089 1.6989700043360187 + + {[CP]|[EA]}N{I|L}QP{[DA]|[EG]}QKY;{[CP]|[EA]}N{I|L}QP[HS]{I|L}N[PG];{[CP]|[EA]}N{I|L}QPTRQGY;{[CP]|[EA]}N{I|L}[AG]P{[DA]|[EG]}QKY;{[CP]|[EA]}GG{I|L}QP{[DA]|[EG]}QKY;{[CP]|[EA]}N{I|L}QP{[DA]|[EG]}[AG]KY;{[CP]|[EA]}NPKYE{[QV]|[N{I|L}]|[RA]|[KV]}[QA];{[CP]|[EA]}N{I|L}Q[WP]QKY;{[CP]|[EA]}N{I|L}Q{M(Oxidation (M))|F}E{[QV]|[N{I|L}]|[RA]|[KV]}[QA];{[CP]|[EA]}N{I|L}QT[YG]{I|L}N[PG] 5.5098;5.0471;5.0166;4.7942;4.7942;4.7942;4.7537;4.5989;4.5508;4.4667 +;-;-;-;-;-;-;-;-;- + 4096 + 1 2.403 101923.6 0.6000000238418579 1208 3175 4380 DOHH2_400M_050219_1,4385 DOHH2_400M_050219_1,4385,AENIQPGEQKY True True AENIQPGEQKY 22.842779 638.811999499798 1266433.75 4380.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 7.632015228271484 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4386 22.857 800.0 121470.0 25 0 6454.8 + 19360 LEQEEQQRL 9 118 586.7996104812299 1171.5846680292598 2 586.7992431521416 MULTI CID FTMS 0 0 0 4380 81930.2109375 1.0 0 0.0 6 Unmodified _LEQEEQQRL_ ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;nc|ENSG00000105197|Q3ZCQ8-3|TIMM50 55.23464941255904 0.0288927259679799 1 {I|L}EQEEQQ{I|L}R 9 2 + 97.908 0.0 0.0 8.3569 8.3569 93.078 0.0 0.0 0.0 72.5238605711081 6.700236701755316 6.700236701755316 9.208187539523747 0 1.1382104921644451 2.0 0.8494850021680094 1.0228787452803376 {I|L}EQEEQQ{I|L}R;{I|L}EQEEQ[AG]{I|L}R;{I|L}EQEE[AG]Q{I|L}R;{I|L}E[AG]EEQQ{I|L}R;{I|L}EQEE[AG][AG]{I|L}R;{I|L}E[AG]EEQ[AG]{I|L}R;{I|L}E[AG]EE[AG]Q{I|L}R;{I|L}EQE[KG]WWP;{I|L}EQ{[QS]|[NT]}VWWP;{I|L}EQ[KS]SE[PA]SP 8.3569;7.5709;7.5709;7.5709;6.7887;6.7887;6.7887;5.8075;5.6025;5.2166 -;-;-;-;-;-;-;-;-;- 843 + 1 2.403 74513.1 0.5099999904632568 1209 3175 4380 DOHH2_400M_050219_1,4386 DOHH2_400M_050219_1,4386,LEQEEQQRL True True LEQEEQQRL 22.85661 586.799243152142 413108.3125 4380.0 nc|ENSG00000105197|Q3ZCQ8-3|TIMM50;;ENSG00000105197|ENST00000607714|TIMM50;;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50 5.853789806365967 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4387 22.858 50.0 1259200.0 25 0 135310.0 + + 8279 QEIGGPRSY 9 76 503.7515459473949 1005.4885389615896 2 503.7513915896416 MULTI CID FTMS 0 0 0 4380 618262.0 0.4428205816433034 -2 0.062286376953125 7 Unmodified _EQLGYFHI_ ENSG00000102393|ENST00000218516|GLA;ENST00000466414.1_1_X:100652799-100653600:-|nuORF 53.57557251787612 0.1224291679108181 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}G 4 -1 35.247 0.0 0.0 3.5055 0.0 0.0 0.0 575.2568244442647 575.2568244442647 30.64326570884305 0.0 0.0 0.0 0 1.5 0.0 0.8807196863200843 0.8252574989159953 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}G 3.5055 + + 152 1 2.403 54806.5 1.0 1210 3175 4380 DOHH2_400M_050219_1,4387 DOHH2_400M_050219_1,4387,EQLGYFHI False False QEIGGPRSY 22.857929 503.751391589642 8320189.5 4380.0 ENSG00000102393|ENST00000218516|GLA;;ENST00000466414.1_1_X:100652799-100653600:-|nuORF 1.8326760828495023 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4388 22.86 80.0 934430.0 25 0 235060.0 + -1 ELPDKHSL 8 80 470.2566549618591 469.2493784952591 1 470.2560607790947 MULTI CID FTMS 0 0 0 4380 462883.6875 0.506808147838486 4 -0.1886940002441406 8 ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENSG00000146223|ENST00000493763|RPL7L1;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;ENST00000469911.1_1_3:182328694-182329198:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 1 {[QN]|[E{I|L}]|[KN]}P 3 -1 22.297 0.0 0.0 4.7517 0.0 0.0 0.0 127.05175489526243 127.05175489526243 11.060129678657711 0.0 0.0 0.0 0 0.0 2.0 0.2887254899964357 0.0 {[QN]|[E{I|L}]|[KN]}P 4.7517 - 19 1 2.403 67146.4 1.0 1211 3175 4380 DOHH2_400M_050219_1,4388 DOHH2_400M_050219_1,4388, False False ELPDKHSL 22.859737 470.256060779095 3272121.25 4380.0 ENST00000397415.7_1_6:42848808-42854199:+|nuORF;;ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;;ENST00000469911.1_1_3:182328694-182329198:+|nuORF;;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 3.511995792388916 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4390 22.866 171.0 359750.0 25 0 22112.0 5405 DLLAWWPNPQ 10 81 620.3130774713335 1238.6116020094669 2 620.3136474490166 MULTI CID FTMS 0 0 0 4389 322729.09375 0.5657067580153099 -44 1.3723201751708984 1 Unmodified _DLLAWWPNPQ_ ENSG00000160161|ENST00000291495|CILP2 13.90604991867851 0.6142120002215601 1 VEEPPPPPMA 10 9 66.72 0.0 0.0 5.3866 0.0 0.0 0.0 191.08306299381096 191.08306299381096 47.03447425662482 0.0 0.0 0.0 0 2.6989700043360187 0.0 0.0 0.0 VEEPPPPPMA 5.3866 - 1127 + 1 2.403 52494.7 1.0 1212 3176 4389 DOHH2_400M_050219_1,4390 DOHH2_400M_050219_1,4390,DLLAWWPNPQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4391 22.879 800.0 84314.0 25 0 23911.0 -1 0 49 1154.156862214474 3459.448757243622 3 1154.492724597454 MULTI CID FTMS 0 0 0 4389 184774.46875 0.9468595792381448 -1 0.0515613555908203 2 1 GT 2 -1 8.5835 0.0 0.0 0.24812 0.0 0.0 2147.7586383788503 1150.5731905572875 3298.3318289361378 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GT 0.24812 - 7 + 1 2.403 66397.1 0.4300000071525574 1213 3176 4389 DOHH2_400M_050219_1,4391 DOHH2_400M_050219_1,4391, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4392 22.884 235.0 249710.0 25 0 32628.0 + 33095 SESELGRKWDR 11 77 454.8967823255208 1361.6685175767625 3 454.8970825076103 MULTI CID FTMS 0 0 0 4389 202853.1875 0.8329384299026255 1 -0.0481014251708984 3 Unmodified _SESELGRKWDR_ ENSG00000173436|ENST00000322753|MICOS10;ENST00000462646.5_1_1:19923518-19941047:+|nuORF;ENST00000467029.5_1_1:19923518-19943759:+|nuORF;ENST00000498067.1_1_1:19923518-19924374:+|nuORF;ENST00000498642.5_1_1:19923539-19952083:+|nuORF;ENST00000602662.1_3_1:19923518-19981524:+|nuORF;nc|ENSG00000173436|Q5TGZ0-2|MICOS10 42.312485326615175 0.1767732348921932 1 SESE{I|L} 5 6 75.261 0.0 0.0 5.5271 0.0 0.0 0.0 813.412571520278 813.412571520278 59.776296993281406 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.8494850021680094 0.0 + SESE{I|L} 5.5271 + + 66 + 1 2.403 52783.2 1.0 1214 3176 4389 DOHH2_400M_050219_1,4392 DOHH2_400M_050219_1,4392,SESELGRKWDR False True SESELGRKWDR 22.88388 454.89708250761 1132238.0 4389.0 ENST00000467029.5_1_1:19923518-19943759:+|nuORF;;ENSG00000173436|ENST00000322753|MICOS10;;ENST00000462646.5_1_1:19923518-19941047:+|nuORF;;ENST00000498642.5_1_1:19923539-19952083:+|nuORF;;ENST00000498067.1_1_1:19923518-19924374:+|nuORF;;ENST00000602662.1_3_1:19923518-19981524:+|nuORF;;nc|ENSG00000173436|Q5TGZ0-2|MICOS10 3.0961769421895347 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4393 22.894 577.0 217600.0 25 0 45062.0 + 26445 NTEENRRFY 9 116 614.7889994773237 1227.5634460214474 2 614.7883178591728 MULTI CID FTMS 0 0 0 4389 155212.515625 1.0 0 0.0 4 Unmodified _NTEENRRFY_ ENSG00000149925|ENST00000642816|ALDOA;ENST00000564521.6_1_16:30075769-30079042:+|nuORF;ENST00000566012.1_1_16:30077179-30079547:+|nuORF;nc|ENSG00000149925|P04075|ALDOA 43.85829265575387 0.0542763391141878 1 Y{M(Oxidation (M))|F}Y[RN]R{M(Oxidation (M))|F}Y 8 4 + 53.889 0.0 0.0 4.3899 4.3899 87.35 0.0 0.0 0.0 40.70107520596089 14.904630595263413 14.904630595263413 50.947342789404814 0 0.4247425010840047 0.0 0.0 0.8494850021680094 Y{M(Oxidation (M))|F}Y[RN]R{M(Oxidation (M))|F}Y;[DP]D[KG][QP]EE[{I|L}T] 4.3899;0.23961 -;- 118 + 1 2.403 94223.9 1.0 1215 3176 4389 DOHH2_400M_050219_1,4393 DOHH2_400M_050219_1,4393,NTEENRRFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4394 22.908 800.0 257980.0 25 0 26520.0 + 6213 ASEPRNMAY 9 197 519.7366923569643 1037.4588317807286 2 519.7375366091728 MULTI CID FTMS 0 0 0 4389 109169.9375 0.6344334491381831 4 -0.1850738525390625 5 Unmodified _DTLEPETAY_ nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1;ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1 23.1484247019978 0.2366544122328345 1 ESAY 4 6 31.503 0.0 0.0 3.0366 0.0 0.0 569.2745630630192 0.0 569.2745630630192 0.0 12.806394243556763 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 ESAY 3.0366 - 385 1 2.403 158029.1 0.5299999713897705 1216 3176 4389 DOHH2_400M_050219_1,4394 DOHH2_400M_050219_1,4394,DTLEPETAY False False ASEPRNMAY 22.907824 519.737536609173 2031565.625 4389.0 nc|ENSG00000139697|A3KN83-3|SBNO1;;nc|ENSG00000139697|A3KN83-4|SBNO1;;ENSG00000139697|ENST00000602398|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1 5.282851854960124 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4396 22.921 500.0 189800.0 25 0 27119.0 + 17587 KPTAAFHLL 9 111 499.2931554959673 996.5717580587346 2 499.2937194705009 MULTI CID FTMS 0 0 0 4395 77281.484375 0.8301070836568674 1 -0.0519771575927734 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 11.640296217721598 0.521594087909532 1 KPT 3 -1 35.005 0.0 0.0 3.5126 0.0 0.0 0.0 667.3534845835118 667.3534845835118 13.209478339592875 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 KPT 3.5126 + + 60 + 1 2.405 78114.7 1.0 1217 3177 4395 DOHH2_400M_050219_1,4396 DOHH2_400M_050219_1,4396,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4397 22.923 142.0 426270.0 25 0 34965.0 + 423 AEELERQGY 9 91 547.7605256734323 1093.5064984136643 2 547.7593871951103 MULTI CID FTMS 0 0 0 4395 307198.28125 0.5604564794876137 -2 0.0996627807617187 2 Unmodified _AEELERQGY_ ENSG00000109111|ENST00000314616|SUPT6H 70.33199760932243 0.0209706178985989 1 {[CP]|[EA]}E{I|L}ERQGY 9 0 + 75.927 0.0 0.0 6.9434 6.9434 90.714 0.0 0.0 0.0 68.93684392785687 14.09256854528806 14.09256854528806 9.208187539523747 0 2.110924374808178 0.0 0.4247425010840047 0.6747425010840047 + + {[CP]|[EA]}E{I|L}ERQGY;{[CP]|[EA]}E{I|L}ER[AG]GY;{[CP]|[EA]}E{I|L}E[VG]QGY;{[CP]|[EA]}E{I|L}E[VG][AG]GY;EEA{I|L}ERQGY 6.9434;6.1013;6.1013;4.6462;2.7799 +;-;-;-;- + 131 + 1 2.405 52157.6 1.0 1218 3177 4395 DOHH2_400M_050219_1,4397 DOHH2_400M_050219_1,4397,AEELERQGY True True AEELERQGY 22.923393 547.75938719511 2473177.75 4395.0 ENSG00000109111|ENST00000314616|SUPT6H 7.046186288197835 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4398 22.926 134.0 606390.0 25 0 97337.0 + 6523 EALAKAGG 8 102 358.7005496534267 715.3865463736535 2 358.7003051638603 MULTI CID FTMS 0 0 0 4395 273207.90625 0.4296155802689186 -3 0.1199893951416015 3 Unmodified _EALAKAGG_ REV__ENSG00000167984|ENST00000359128|NLRC3;REV__nc|ENSG00000167984|Q7RTR2-2|NLRC3;REV__nc|ENSG00000167984|Q7RTR2-4|NLRC3 13.50788311687929 0.7113601687236069 1 {[CP]|[EA]}{I|L}VER 6 -1 + 30.961 0.0 0.0 4.3279 4.3279 71.627 0.0 0.0 0.0 6.478174818886373 0.6776016169941457 0.6776016169941457 0.4845500650402812 0 0.2742275032520141 0.0 0.6237125054200234 0.0 {[CP]|[EA]}{I|L}VER;{[CP]|[EA]}{I|L}EVR;{[CP]|[EA]}{I|L}ERV;{[CP]|[EA]}{I|L}VWV;{[CP]|[EA]}V{I|L}ER;{[CP]|[EA]}V{I|L}WV;{[CP]|[EA]}{I|L}[RD]{I|L};{[CP]|[EA]}V{[RE]|[WV]}{I|L} 4.3279;4.2602;4.2332;3.4291;3.2776;2.7621;2.1489;1.0986 -;-;-;-;-;-;-;- 102 + 1 2.405 68369.0 1.0 1219 3177 4395 DOHH2_400M_050219_1,4398 DOHH2_400M_050219_1,4398,EALAKAGG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4399 22.93 197.0 497370.0 25 0 38040.0 + 8522 ETEKDFSRY 9 90 587.7726213985824 1173.5306898639649 2 587.7725707888603 MULTI CID FTMS 0 0 0 4395 265056.75 0.362282041961901 -2 0.0996627807617187 4 Unmodified _ETEKDFSRY_ ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF 57.24910588100465 0.0276051374632116 1 ETEKD{M(Oxidation (M))|F} 6 3 64.439 0.0 0.0 5.4911 0.0 0.0 0.0 421.1843355768188 421.1843355768188 40.12553968976347 0.0 0.0 0.0 0 0.8076556684809653 1.3979400086720375 0.4247425010840047 0.0 + ETEKD{M(Oxidation (M))|F} 5.4911 + + 177 + 1 2.405 78572.8 1.0 1220 3177 4395 DOHH2_400M_050219_1,4399 DOHH2_400M_050219_1,4399,ETEKDFSRY True True ETEKDFSRY 22.929872 587.77257078886 8091262.25 4395.0 ENSG00000021776|ENST00000156471|AQR;;ENST00000543879.6_1_15:35166876-35196659:-|nuORF 7.696018060048421 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4400 22.935 262.0 338000.0 25 0 29154.0 + 32867 SEIDKRVQY 9 96 569.298545626045 1136.58253831889 2 569.2988769412041 MULTI CID FTMS 0 0 0 4395 242196.84375 0.6633799952512384 -1 0.0481014251708984 5 Unmodified _SEIDKRVQY_ ENSG00000163510|ENST00000410053|CWC22 67.83816525789305 0.0219346420158844 1 SE{I|L}DK 5 4 70.349 0.0 0.0 6.1896 0.0 0.0 0.0 561.2807365621101 561.2807365621101 48.05584714187489 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.5 0.7302046884880937 + SE{I|L}DK 6.1896 + + 178 + 1 2.405 68553.7 1.0 1221 3177 4395 DOHH2_400M_050219_1,4400 DOHH2_400M_050219_1,4400,SEIDKRVQY True True SEIDKRVQY 22.934747 569.298876941204 1787567.625 4395.0 ENSG00000163510|ENST00000410053|CWC22 5.9313896497090655 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4401 22.939 235.0 377470.0 25 0 23236.0 + 32868 SEIDKRVQY 9 114 379.868753305436 1136.584430516508 3 379.8681823611259 MULTI CID FTMS 0 0 0 4395 202632.859375 0.4221671818764226 -1 0.0481014251708984 6 Unmodified _SEIDKRVQY_ ENSG00000163510|ENST00000410053|CWC22 54.773552608820026 0.0299037012502309 1 {[ES]|[DT]|[{I|L}C]}{I|L}DKANVVY 10 3 {[ES]|[DT]|[{I|L}C]} + + 39.831 5.6475 2.6137 3.5044 3.5044 51.734 0.0 0.0 0.0 0.0 -5.897554856604174 -5.897554856604174 0.0 0 0.4247425010840047 0.0 0.0 1.6989700043360187 {[ES]|[DT]|[{I|L}C]}{I|L}DKANVVY 3.5044 - 487 + 1 2.405 74913.6 1.0 1222 3177 4395 DOHH2_400M_050219_1,4401 DOHH2_400M_050219_1,4401,SEIDKRVQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4402 22.951 667.0 344370.0 25 0 22361.0 + 6638 EAVIKHSL 8 162 448.7636278050559 895.5127026769118 2 448.7633239626884 MULTI CID FTMS 0 0 0 4395 119438.578125 0.3511395717587477 -2 0.0996627807617187 7 Unmodified _EAVIKHSL_ ENSG00000080608|ENST00000397885|PUM3 88.95385435242217 0.0526491763134581 1 EAV{I|L}KHS{I|L} 8 0 + 80.695 0.0 0.0 9.0111 9.0111 96.368 0.0 0.0 0.0 23.05584714187489 14.800573420405158 14.800573420405158 14.800573420405158 0 1.25 1.5228787452803376 1.3684151806525389 0.0 + + EAV{I|L}KHS{I|L};EAV{I|L}K{I|L}SH;{I|L}GE{I|L}KHS{I|L};EAVH[K{I|L}]S{I|L};{I|L}GE{I|L}K{I|L}SH;{I|L}GEH[K{I|L}]S{I|L};{[TV]|[{I|L}S]}HK{I|L}{[DA]|[EG]}{I|L};{[TV]|[{I|L}S]}HKV{[CP]|[EA]}{I|L};[HV]TK{I|L}{[DA]|[EG]}{I|L};[HS]{I|L}K{I|L}{[DA]|[EG]}{I|L} 9.0111;7.3583;6.4365;6.1666;4.7837;3.592;3.244;2.7997;2.7335;2.5383 +;-;-;-;-;-;-;-;-;- + 752 + 1 2.405 180808.2 1.0 1223 3177 4395 DOHH2_400M_050219_1,4402 DOHH2_400M_050219_1,4402,EAVIKHSL True True EAVIKHSL 22.950747 448.763323962688 1392096.25 4395.0 ENSG00000080608|ENST00000397885|PUM3 5.213353951772054 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4403 22.956 284.0 226790.0 25 0 38980.0 + 39192 TYQKLVLY 8 76 514.2960190842597 1026.5774852353193 2 514.2977172732353 MULTI CID FTMS 0 0 0 4395 85258.640625 1.0 0 0.0 8 Unmodified _TYQKLVLY_ REV__ENSG00000025772|ENST00000372813|TOMM34 5.760428011301431 0.7893668129297577 1 [YT]{M(Oxidation (M))|F} 3 -1 24.437 0.0 0.0 2.3804 0.0 0.0 0.0 612.3836005619977 612.3836005619977 9.832881222565248 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [YT]{M(Oxidation (M))|F} 2.3804 - 32 1 2.405 54653.9 1.0 1224 3177 4395 DOHH2_400M_050219_1,4403 DOHH2_400M_050219_1,4403,TYQKLVLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4404 22.96 201.0 377710.0 25 0 110200.0 -1 0 97 394.1855387913646 393.1782623247646 1 394.1850768923759 MULTI CID FTMS 0 0 0 4395 291484.71875 0.127163931517215 8 -0.2493820190429687 9 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M 3 -1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} + + 11.259 -0.65167 -0.26694 2.8636 2.8636 50.161 0.0 0.0 0.0 0.0 1.926754406820086 0.0 0.0 0 0.0 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M 2.8636 - 7 + 1 2.405 59684.7 1.0 1225 3177 4395 DOHH2_400M_050219_1,4404 DOHH2_400M_050219_1,4404, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4406 22.971 461.0 197880.0 25 0 23713.0 + 36939 TEVTGHRW 8 103 493.2460561252528 984.4775593173056 2 493.2456542849541 MULTI CID FTMS 0 0 0 4405 106265.7578125 0.0498700381537212 7 -0.1974048614501953 1 Unmodified _TEVTGHRW_ chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;ENSG00000172270|ENST00000333511|BSG;ENST00000576925.3_1_19:572634-579657:+|nuORF;nc|ENSG00000172270|P35613-2|BSG 25.399314129420983 0.5099049743284904 1 {[TV]|[{I|L}S]}E[QP]TVDP 9 7 + 38.406 0.0 0.0 3.9012 3.9012 78.62 0.0 0.0 0.0 8.040681998460574 7.389917747712651 7.389917747712651 8.040681998460574 0 0.5242275032520141 0.8538719643217619 0.3252574989159953 0.0 {[TV]|[{I|L}S]}E[QP]TVDP;{[ET]|[MV]}VT[QP]VDP;{[ET]|[MV]}V[QP]TVDP;[PA]{[NV]|[RG]}HHVDP 3.9012;3.0844;3.0106;1.1798 -;-;-;- 86 1 2.405 74846.1 1.0 1226 3178 4405 DOHH2_400M_050219_1,4406 DOHH2_400M_050219_1,4406,TEVTGHRW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4407 22.972 27.0 2809500.0 25 0 434650.0 + 33075 SERALALMK 9 86 509.7893255209455 1017.564098108691 2 509.7895385622978 MULTI CID FTMS 0 0 0 4405 2091129.375 0.6616679836187978 -2 0.1000785827636718 2 Unmodified _SERALALMK_ ENSG00000111271|ENST00000313698|ACAD10;ENST00000547491.1_1_12:112186933-112194274:+|nuORF;nc|ENSG00000111271|Q6JQN1-5|ACAD10 30.63653989081413 0.1413794767160703 1 TMK 3 7 43.575 0.0 0.0 4.2823 0.0 0.0 639.3702942530255 0.0 639.3702942530255 0.0 20.38725489996436 0.0 0.0 0 1.424742501084005 0.0 0.0 0.6139829889124311 TMK 4.2823 - 147 + 1 2.405 65167.4 1.0 1227 3178 4405 DOHH2_400M_050219_1,4407 DOHH2_400M_050219_1,4407,SERALALMK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4408 22.974 108.0 518510.0 25 0 56736.0 + 42372 VTDKSMVDKY 10 89 395.8652475320104 0 395.8654357790947 PEAK CID FTMS 0 0 0 4405 354945.59375 0.5530689660982006 -2 0.1000785827636718 3 Unmodified _VTDKSMVDKY_ ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS 44.391923383255 0.0798298465269738 1 MVDK 4 6 14.262 0.0 0.0 1.806 0.0 0.0 135.41035238648334 178.05120264224846 313.4615550287318 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.3494850021680094 + MVDK 1.806 + + 63 + 1 2.405 52933.6 1.0 1228 3178 4405 DOHH2_400M_050219_1,4408 DOHH2_400M_050219_1,4408,VTDKSMVDKY True True VTDKSMVDKY 22.97398 395.865435779095 4057612.125 4405.0 ENSG00000136813|ENST00000684092|ECPAS;;nc|ENSG00000136813|Q5VYK3|ECPAS 7.295978387196858 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4409 22.98 349.0 462160.0 25 0 38771.0 + 16710 KETEIVKKL 9 151 363.2289886914144 1086.6651366744431 3 363.2286559939384 MULTI CID FTMS 0 0 0 4405 204612.3125 0.4213453887972707 -3 0.1516399383544922 4 Unmodified _KETEIVKKL_ ENSG00000115816|ENST00000234170|CEBPZ 74.7717668357584 0.0192543659592842 1 {I|L}[SG]TE{I|L}VK{I|L}K 10 5 + 71.773 0.0 0.0 6.6049 6.6049 85.274 0.0 0.0 0.0 13.908555305749331 5.070375016816257 5.070375016816257 5.070375016816257 0 2.1120155761587904 0.0 0.5 0.8441876774005248 {I|L}[SG]TE{I|L}VK{I|L}K;{I|L}[SG]TE{I|L}VKK{I|L};{I|L}KE{[ET]|[MV]}VK{I|L}K;{I|L}KE{[ET]|[MV]}VKK{I|L};{I|L}[SG]{I|L}{[ET]|[MV]}VK{I|L}K;{I|L}[SG]{I|L}{[ET]|[MV]}VKK{I|L} 6.6049;6.1383;4.569;4.1024;4.0104;3.5438 -;-;-;-;-;- 342 + 1 2.405 132566.4 1.0 1229 3178 4405 DOHH2_400M_050219_1,4409 DOHH2_400M_050219_1,4409,KETEIVKKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4410 22.986 338.0 264490.0 25 0 22632.0 40028 VGFPGAGK 8 148 366.7059252832925 731.397297633385 2 366.7055541872978 MULTI CID FTMS 0 0 0 4405 110743.75 1.0 0 0.0 5 Unmodified _VGFPGAGK_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50364507-50367546:-|nuORF;ENST00000601816.3_1_19:50365027-50365457:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 0.7936320650641473 0.8195151834710337 1 PEV 3 7 40.49 0.0 0.0 5.536 0.0 0.0 0.0 403.2099093072876 403.2099093072876 29.070276793532795 0.0 0.0 0.0 0 0.7838722297354019 1.6989700043360187 0.0 0.0 PEV 5.536 - 33 + 1 2.405 74545.2 1.0 1230 3178 4405 DOHH2_400M_050219_1,4410 DOHH2_400M_050219_1,4410,VGFPGAGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4411 22.997 600.0 224350.0 25 0 14673.0 + 38501 TSKDKTIL 8 160 453.2692908851638 904.5240288371276 2 453.2690917849541 MULTI CID FTMS 0 0 0 4405 89859.5703125 0.784101186599793 -1 0.0519771575927734 6 Unmodified _TSKDKTIL_ chr12:25052956-25063720|41|17.37|0.82|4.41|+|ENST00000547044|IRAG2,IRAG2;ENSG00000118308|ENST00000556887|IRAG2;nc|ENSG00000118308|Q12912|IRAG2 49.55428908609986 0.1413437743149504 1 TSK 3 5 40.558 0.0 0.0 4.4839 0.0 0.0 0.0 585.3277071588499 585.3277071588499 2.906818243744248 0.0 0.0 0.0 0 0.4896518287104437 1.3979400086720375 0.0 0.0 + TSK 4.4839 + + 408 + 1 2.405 108196.8 1.0 1231 3178 4405 DOHH2_400M_050219_1,4411 DOHH2_400M_050219_1,4411,TSKDKTIL False True TSKDKTIL 22.996863 453.269091784954 593623.4375 4405.0 nc|ENSG00000118308|Q12912|IRAG2;;ENSG00000118308|ENST00000556887|IRAG2;;chr12:25052956-25063720|41|17.37|0.82|4.41|+|ENST00000547044|IRAG2,IRAG2 3.09963059425354 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4413 23.004 267.0 254930.0 25 0 25725.0 + 511 AEHDVTVKY 9 119 531.2653940793048 1060.5162352254094 2 531.2651244997978 MULTI CID FTMS 0 0 0 4412 183766.34375 0.9065349265860656 -2 0.0890312194824218 1 Unmodified _AEHDVTVKY_ ENSG00000146281|ENST00000275072|PM20D2 36.12702656103203 0.0967173616627612 1 DVTVKY 6 3 30.723 0.0 0.0 2.897 0.0 0.0 337.13777358222814 0.0 337.13777358222814 0.0 16.743654027429287 0.0 0.0 0 1.0924778212679485 0.0 1.0 0.0 + DVTVKY 2.897 + + 204 1 2.405 57215.1 1.0 1232 3179 4412 DOHH2_400M_050219_1,4413 DOHH2_400M_050219_1,4413,AEHDVTVKY True True AEHDVTVKY 23.004355 531.265124499798 2474728.5 4412.0 ENSG00000146281|ENST00000275072|PM20D2 6.021616458892822 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4414 23.018 800.0 93707.0 25 0 4679.0 + -1 GANKCLEEDRF 11 113 669.8072467913547 1337.599940649509 2 669.8067504763603 MULTI CID FTMS 0 0 0 4412 50990.078125 0.5938789808917198 1 -0.0479412078857421 2 Carbamidomethyl (C) _GANKC(Carbamidomethyl (C))LEEDRF_ REV__ENSG00000107518|ENST00000355044|ATRNL1 13.042465956692816 0.7638483625850725 1 {[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQQNA{M(Oxidation (M))|F} 13 -1 + 87.675 0.0 0.0 6.5547 6.5547 86.971 0.0 0.0 0.0 11.20209902977065 16.642078980768076 11.20209902977065 7.126629045808357 0 1.1861818737241734 1.0457574905606752 0.2614393726401688 0.7742275032520141 {[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}AEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}AEA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}AEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}[RD]QQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}AEAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}AEAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}AEA[AG]QNA{M(Oxidation (M))|F} 6.5547;6.0219;5.8764;5.8764;5.8764;5.7172;5.4631;5.3417;5.3417;5.3417 -;-;-;-;-;-;-;-;-;- 1054 1 2.405 59974.2 0.5 1233 3179 4412 DOHH2_400M_050219_1,4414 DOHH2_400M_050219_1,4414,GANKCLEEDRF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4415 23.02 52.0 1487800.0 25 0 131680.0 + 8523 ETEKDFSRY 9 91 392.18448733653327 1173.5316326097998 3 392.1837951540947 MULTI CID FTMS 0 0 0 4412 882240.0625 1.0 0 0.0 3 Unmodified _ETEKDFSRY_ ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF 18.1463463914782 0.3454829746528889 1 D{M(Oxidation (M))|F}SRY 5 4 30.987 0.0 0.0 2.6405 0.0 0.0 487.22925083901663 0.0 487.22925083901663 0.0 19.75009480581832 0.0 0.0 0 0.0 0.0 0.75 0.0 + D{M(Oxidation (M))|F}SRY 2.6405 + + 166 + 1 2.405 67832.9 1.0 1234 3179 4412 DOHH2_400M_050219_1,4415 DOHH2_400M_050219_1,4415,ETEKDFSRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4416 23.033 800.0 330140.0 25 0 34495.0 + 6322 DVIQKNKL 8 174 479.2905789851165 956.566605037033 2 479.2904540896416 MULTI CID FTMS 0 0 0 4412 154378.765625 0.555724787499512 -2 0.0890312194824218 4 Unmodified _DVIQKNKL_ ENSG00000020426|ENST00000261245|MNAT1;ENST00000556764.5_1_14:61201502-61275155:+|nuORF;nc|ENSG00000020426|P51948-2|MNAT1 54.773552608820026 0.1167943196628344 1 [DV]{I|L}QKNK{I|L} 8 0 + 60.451 0.0 0.0 6.3196 6.3196 86.263 0.0 0.0 0.0 26.989700043360173 6.93840708304036 6.93840708304036 6.93840708304036 0 1.0629529932484498 2.0 0.0 1.1050541008457977 + + [DV]{I|L}QKNK{I|L};[DV]{I|L}QKN{I|L}K;[DV]{I|L}[AG]KNK{I|L};[DV]{I|L}QKGGK{I|L};[DV]{I|L}[AG]KN{I|L}K;[DV]{I|L}QKGG{I|L}K;[DV]{I|L}[AG]KGGK{I|L};[DV]{I|L}QK[KQ]V;[DV]{I|L}[AG]KGG{I|L}K;{I|L}[DV]QKNK{I|L} 6.3196;5.5942;5.3513;5.3513;4.626;4.626;4.3887;4.1462;3.6633;3.3407 +;-;-;-;-;-;-;-;-;- + 448 + 1 2.405 203824.2 0.5899999737739563 1235 3179 4412 DOHH2_400M_050219_1,4416 DOHH2_400M_050219_1,4416,DVIQKNKL True True DVIQKNKL 23.033361 479.290454089642 1196339.25 4412.0 nc|ENSG00000020426|P51948-2|MNAT1;;ENST00000556764.5_1_14:61201502-61275155:+|nuORF;;ENSG00000020426|ENST00000261245|MNAT1 4.075445572535197 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4417 23.045 656.0 224930.0 25 0 20771.0 + 16711 KETEIVKKL 9 160 544.3399279976951 1086.66530306219 2 544.3393432497978 MULTI CID FTMS 0 0 0 4412 85879.515625 0.6519013322829449 -2 0.0890312194824218 5 Unmodified _KETEIVKKL_ ENSG00000115816|ENST00000234170|CEBPZ 68.4839486629058 0.0216850058378077 1 VTGVKK{I|L} 7 4 74.888 0.0 0.0 6.8915 0.0 0.0 343.174608299025 0.0 343.174608299025 0.0 36.04355589266062 0.0 0.0 0 1.1989700043360187 0.0 1.3441876774005248 0.3494850021680094 VTGVKK{I|L} 6.8915 - 920 1 2.405 114432.1 1.0 1236 3179 4412 DOHH2_400M_050219_1,4417 DOHH2_400M_050219_1,4417,KETEIVKKL True True KETEIVKKL 23.044799 544.339343249798 2842799.375 4412.0 ENSG00000115816|ENST00000234170|CEBPZ 5.25730562210083 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4419 23.05 34.0 1450000.0 25 0 150070.0 + 8506 ETDRGMSAEY 10 64 579.7400470958429 1157.4655412584857 2 579.7405273318291 MULTI CID FTMS 0 0 0 4418 1711339.875 0.5811650027146494 2 -0.0656280517578125 1 Unmodified _ETDRGMSAEY_ ENSG00000100347|ENST00000350028|SAMM50 26.268140514670165 0.3785003716575977 1 SAEY 4 6 42.779 0.0 0.0 3.696 0.0 0.0 689.2808094709 0.0 689.2808094709 0.0 19.89909385331508 0.0 0.0 0 0.5 0.0 1.1861818737241734 0.0 + SAEY 3.696 + + 50 1 2.405 40633.8 1.0 1237 3180 4418 DOHH2_400M_050219_1,4419 DOHH2_400M_050219_1,4419,ETDRGMSAEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4420 23.063 800.0 90332.0 25 0 5604.6 + 26426 NTDRPGGYSY 10 125 565.2490284736895 1128.4835040141788 2 565.2485839724541 MULTI CID FTMS 0 0 0 4418 60116.28125 0.1168371294711563 4 -0.1085376739501953 2 Unmodified _NTDRPGGYSY_ ENST00000539639.5_1_12:123707622-123714920:-|nuORF 55.23464941255904 0.0494277333541689 1 {[QS]|[NT]}DR[NP]YSY 9 2 + 57.886 0.0 0.0 5.1296 5.1296 88.346 0.0 0.0 0.0 20.29628369559334 29.329926395242573 20.29628369559334 20.355318460545185 0 2.274227503252014 1.3979400086720375 0.4531198197908842 0.7302046884880937 {[QS]|[NT]}DR[NP]YSY;{[{M(Oxidation (M))|F}C]|[YS]}[HV][NP]YSY;{[QS]|[NT]}DRW{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CT]|[{M(Oxidation (M))|F}G]};[QT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[NP]YSY;AAS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[NP]YSY;[TA][WQ][NP]YSY;{[QS]|[NT]}DT[NP][HV][MT];{[QS]|[NT]}DR{[DA]|[EG]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CT]|[{M(Oxidation (M))|F}G]};{[QS]|[NT]}D[VG]W{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CT]|[{M(Oxidation (M))|F}G]};[PS]TP[WE]YSY 5.1296;3.3258;3.0275;2.6816;2.4521;2.3915;2.3409;2.2115;2.2115;1.9452 -;-;-;-;-;-;-;-;-;- 216 1 2.405 61124.2 0.6600000262260437 1238 3180 4418 DOHH2_400M_050219_1,4420 DOHH2_400M_050219_1,4420,NTDRPGGYSY True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4422 23.07 198.0 266270.0 25 0 22968.0 42356 VTDEPYVSLY 10 107 593.2874118044306 1184.560270675661 2 593.2954589724541 MULTI CID FTMS 0 0 0 4421 228779.4375 0.3411754760323378 -11 0.4807777404785156 1 Unmodified _VTDEPYVSLY_ ENST00000286298.4_1_5:149365201-149365333:+|nuORF 12.174745833636583 0.6432616012102976 1 {[TV]|[{I|L}S]}[EC]KTVD[YK] 10 5 + 28.912 0.0 0.0 2.4407 2.4407 70.738 0.0 0.0 0.0 3.29191156907012 5.680604048948766 3.29191156907012 3.29191156907012 0 0.5 1.5228787452803376 0.1861818737241735 0.0 {[TV]|[{I|L}S]}[EC]KTVD[YK];{[QD]|[EN]|[WG]|[KD]|[RS]}{[WT]|[RM]}MVD[YK];{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}[RD]VD[YK];{[TV]|[{I|L}S]}[EC]KTDV[YK];{[TV]|[{I|L}S]}[EC]KDTV[YK];{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}[PS]SVD[YK];{[QD]|[EN]|[WG]|[KD]|[RS]}{[WT]|[RM]}MDV[YK];{[CP]|[EA]}[HS]VT[HN]KY;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}[RD]DV[YK];[QP][WY]SVD[YK] 2.4407;2.1628;1.9087;1.8507;1.5965;1.581;1.5728;1.3339;1.3186;1.2418 -;-;-;-;-;-;-;-;-;- 589 1 2.405 44499.9 1.0 1239 3181 4421 DOHH2_400M_050219_1,4422 DOHH2_400M_050219_1,4422,VTDEPYVSLY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4423 23.078 451.0 259200.0 25 0 60906.0 + 25187 MSTNGIPR 8 133 438.2236446176894 874.4327363021788 2 438.2234985232353 MULTI CID FTMS 0 0 0 4421 109887.203125 0.9512272877775998 1 -0.0469894409179687 2 Unmodified _MSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 22.736283301280096 0.5659792798204337 1 MSTNG{I|L}PR 8 0 + 62.803 0.0 0.0 7.1822 7.1822 80.432 0.0 0.0 0.0 36.40978057358332 0.1772876696043113 0.1772876696043113 0.1772876696043113 0 0.4247425010840047 2.0 0.0 0.3252574989159953 + + MSTNG{I|L}PR;MSTNG{I|L}RP;MSTGGG{I|L}PR;MSTGGG{I|L}RP;MSTNG[RP]{I|L};MSTGGG[RP]{I|L};[AG]KKGNTCP 7.1822;7.1619;6.1229;6.1027;4.7091;3.6499;0.13922 +;-;-;-;-;-;- + 118 + 1 2.405 97499.4 1.0 1240 3181 4421 DOHH2_400M_050219_1,4423 DOHH2_400M_050219_1,4423,MSTNGIPR False True MSTNGIPR 23.077788 438.223498523235 564598.25 4421.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 5.984121004740397 2.0 True 8.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4424 23.082 254.0 492270.0 25 0 34953.0 + 11075 GEDVETSKKW 10 151 393.5280385784296 1177.5622863354888 3 393.5278808474541 MULTI CID FTMS 0 0 0 4421 188488.21875 0.231925502656505 -5 0.2037124633789062 3 Unmodified _GEDVETSKKW_ ENSG00000107223|ENST00000224073|EDF1;nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1 23.015651743759182 0.4515786786615758 1 {[DA]|[EG]}DVETSKKW 10 0 + 74.575 0.0 0.0 6.333 6.333 92.382 0.0 0.0 0.0 50.03205960551831 11.082268588648247 11.082268588648247 17.769250191953674 0 0.3494850021680094 1.6989700043360187 0.4247425010840047 0.0 + + {[DA]|[EG]}DVETSKKW;{[DA]|[EG]}DVWMKKW;{[DA]|[EG]}DVETP[R{I|L}]Y;{[DA]|[EG]}DVETP[YR]{I|L};WDV{[DA]|[EG]}MKKW;{[DA]|[EG]}DVE[KQ]K[{M(Oxidation (M))|F}V];{[DA]|[EG]}DVE[RV]{[{M(Oxidation (M))|F}D]|MM}{I|L};{[DA]|[EG]}DVEKK{[MG]|[TS]}W;{[DA]|[EG]}W[DV]MKKW;{[DA]|[EG]}DVWVV{[{M(Oxidation (M))|F}D]|MM}{I|L} 6.333;4.824;4.4462;4.331;3.7419;3.6596;3.5056;3.404;3.2994;3.2727 +;-;-;-;-;-;-;-;-;- + 626 + 1 2.405 100756.6 1.0 1241 3181 4421 DOHH2_400M_050219_1,4424 DOHH2_400M_050219_1,4424,GEDVETSKKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4425 23.091 466.0 248060.0 25 0 35088.0 39068 TVVPGPQP 8 143 397.72383928293226 0 397.7238952517509 PEAK CID FTMS 0 0 0 4421 147439.0625 1.0 0 0.0 4 Unmodified _TVVPGPQP_ ENST00000563229.5_1_15:74281313-74286901:-|nuORF 24.67388899826682 0.3296343502680589 1 VPT 3 6 16.287 0.0 0.0 2.0527 0.0 0.0 200.11524674482425 293.12580286197505 493.24104960679927 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 VPT 2.0527 - 41 + 1 2.405 94054.1 1.0 1242 3181 4421 DOHH2_400M_050219_1,4425 DOHH2_400M_050219_1,4425,TVVPGPQP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4426 23.105 800.0 156040.0 25 0 10873.0 + 5370 DLKGKPVAV 9 133 463.78731542390295 925.560077914606 2 463.7870666384697 MULTI CID FTMS 0 0 0 4421 106605.2578125 0.9579084553463058 -1 0.0186386108398437 5 Unmodified _DLKGKPVAV_ ENSG00000135945|ENST00000258428|REV1;ENST00000413697.5_1_2:100019089-100065949:-|nuORF;ENST00000486117.1_1_2:100048385-100055261:-|nuORF;nc|ENSG00000135945|Q9UBZ9-2|REV1 47.74868867922204 0.0453060283459952 1 D{I|L}K[KG][VP]AV 9 0 + 61.749 0.0 0.0 6.6715 6.6715 91.155 0.0 0.0 0.0 34.97302484056647 9.547509540478032 9.547509540478032 9.547509540478032 0 1.411954370472159 2.0 0.0 0.3807196863200844 + + D{I|L}K[KG][VP]AV;D{I|L}K[KG][VP]G{I|L};D{I|L}K[KG]VV[PA];[VP][KG]KA{I|L}DV;[VP][KG]K{NN|[MP]|[D{I|L}]|[EV]}AV;[KG]K{NN|[MP]|[D{I|L}]|[EV]}[VP]AV;[KG]K[VP]A{I|L}DV 6.6715;5.64;3.9456;1.6563;0.93004;0.14754;0.13906 +;-;-;-;-;-;- + 329 + 1 2.405 101412.9 0.4699999988079071 1243 3181 4421 DOHH2_400M_050219_1,4426 DOHH2_400M_050219_1,4426,DLKGKPVAV True True DLKGKPVAV 23.104557 463.78706663847 752609.625 4421.0 ENST00000413697.5_1_2:100019089-100065949:-|nuORF;;ENST00000486117.1_1_2:100048385-100055261:-|nuORF;;ENSG00000135945|ENST00000258428|REV1;;nc|ENSG00000135945|Q9UBZ9-2|REV1 4.02999226252238 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4427 23.106 66.0 1111600.0 25 0 71512.0 + 33079 SEASRLAHY 9 87 517.2852793069982 1032.5560056807965 2 517.2856323122978 MULTI CID FTMS 0 0 0 4421 686410.1875 0.3283953658379638 -53 1.6290512084960938 6 Unmodified _SERIGIPVY_ ENSG00000185130|ENST00000377401|H2BC13;ENSG00000146047|ENST00000274764|H2BC1;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENSG00000196890|ENST00000693095|H2BC26 4.75600775471527 0.7486543447549536 1 Y 1 8 11.109 0.0 0.0 1.0759 0.0 0.0 851.4819222841151 0.0 851.4819222841151 0.0 1.4315336942163714 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.0759 + + 24 + 1 2.405 62660.1 1.0 1244 3181 4421 DOHH2_400M_050219_1,4427 DOHH2_400M_050219_1,4427,SERIGIPVY False False SEASRLAHY 23.106156 517.285632312298 1816936.375 4421.0 ENSG00000185130|ENST00000377401|H2BC13;;ENSG00000146047|ENST00000274764|H2BC1;;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;;ENSG00000196890|ENST00000693095|H2BC26 3.687024752298991 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4428 23.11 227.0 272330.0 25 0 29467.0 + 4719 MLDHQPPQY 9 107 572.2696654632434 0 572.2691528201103 PEAK CID FTMS 0 0 0 4421 163345.71875 0.920263322068298 2 -0.0623111724853515 7 Unmodified _DEDAYKKQF_ ENSG00000108604|ENST00000448276|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;nc|ENSG00000108604|Q92925-3|SMARCD2 22.736283301280096 0.1762661025464585 1 AD 2 8 9.8206 0.0 0.0 0.85955 0.0 0.0 712.3912768719962 241.0467318170532 953.4380086890492 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 AD 0.85955 - 82 + 1 2.405 50342.8 1.0 1245 3181 4421 DOHH2_400M_050219_1,4428 DOHH2_400M_050219_1,4428,DEDAYKKQF False True MLDHQPPQY 23.110435 572.26915282011 1026074.0 4421.0 ENSG00000108604|ENST00000448276|SMARCD2;;nc|ENSG00000108604|Q92925-2|SMARCD2;;nc|ENSG00000108604|Q92925-3|SMARCD2 5.792315483093262 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4430 23.115 60.0 963350.0 25 0 106880.0 + 336 AEALPKQSV 9 72 471.7673267562765 941.5201005793532 2 471.7665588259697 MULTI CID FTMS 0 0 0 4429 860932.1875 0.4415084406037193 3 -0.0467815399169921 1 Unmodified _AEALPKQSV_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 49.55428908609986 0.0413471690215031 1 {[CP]|[EA]}A{I|L}PKQSV 9 0 + 45.639 0.0 0.0 4.8473 4.8473 83.804 0.0 0.0 0.0 20.47106248532351 17.905302150437237 17.905302150437237 9.208187539523747 0 0.5 0.0 0.805462187404089 0.3252574989159953 + + {[CP]|[EA]}A{I|L}PKQSV;{[CP]|[EA]}A{I|L}PK[AG]SV 4.8473;3.8693 +;- + 143 + 1 2.405 51874.7 1.0 1246 3182 4429 DOHH2_400M_050219_1,4430 DOHH2_400M_050219_1,4430,AEALPKQSV True True AEALPKQSV 23.1153 471.76655882597 9434200.0 4429.0 nc|ENSG00000145741|P20290-2|BTF3;;ENSG00000145741|ENST00000380591|BTF3 7.156237284342448 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4431 23.117 80.0 839480.0 25 0 56611.0 + 8280 EQLGYFHI 8 96 503.7515459473949 1005.4885389615896 2 503.7517272830009 MULTI CID FTMS 0 0 0 4429 347456.6875 0.2488604708919608 5 -0.0948772430419921 2 Unmodified _EQLGYFHI_ REV__ENSG00000113615|ENST00000398844|SEC24A;REV__nc|ENSG00000113615|O95486-2|SEC24A 28.17323086031832 0.4514957916281387 1 [YT][WK]G{I|L} 6 -1 30.449 0.0 0.0 3.0283 0.0 0.0 0.0 254.07932588986003 254.07932588986003 14.251284189090825 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.2059771852360797 0.0 [YT][WK]G{I|L} 3.0283 - 332 1 2.405 57141.7 1.0 1247 3182 4429 DOHH2_400M_050219_1,4431 DOHH2_400M_050219_1,4431,EQLGYFHI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4432 23.118 47.0 1294000.0 25 0 168850.0 + 45443 YTDVSTRY 8 84 502.7378876762718 1003.4612224193436 2 502.7379333376884 MULTI CID FTMS 0 0 0 4429 712034.1875 0.0981349314638975 -8 0.3225898742675781 3 Unmodified _YTDVSTRY_ ENSG00000213593|ENST00000278422|TMX2;ENST00000436507.2_1_9:37885847-37886384:+|nuORF;nc|ENSG00000213593|Q9Y320-2|TMX2 32.78568957990786 0.3549862272178655 1 YTDVY 5 3 61.186 0.0 0.0 6.0975 0.0 0.0 0.0 359.16965662174067 359.16965662174067 49.80787812001574 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 YTDVY 6.0975 - 323 + 1 2.405 50164.9 1.0 1248 3182 4429 DOHH2_400M_050219_1,4432 DOHH2_400M_050219_1,4432,YTDVSTRY False True YTDVSTRY 23.118375 502.737933337688 137139840.0 4429.0 ENSG00000213593|ENST00000278422|TMX2;;nc|ENSG00000213593|Q9Y320-2|TMX2;;ENST00000436507.2_1_9:37885847-37886384:+|nuORF 6.819783369700114 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4433 23.122 183.0 406510.0 25 0 25301.0 + 11077 GEDVETSKKW 10 94 589.7881966065665 1177.561840279933 2 589.7883178591728 MULTI CID FTMS 0 0 0 4429 317411.375 0.4746080610015475 -5 0.2026004791259765 4 Unmodified _GEDVETSKKW_ ENSG00000107223|ENST00000224073|EDF1;nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1 52.19289622718417 0.0672803650928222 1 {[DA]|[EG]}DVETSKKW 10 0 + 92.177 0.0 0.0 7.8278 7.8278 89.911 0.0 0.0 0.0 57.95880017344075 12.64136888583522 12.64136888583522 7.33410649039925 0 2.110924374808178 1.5228787452803376 0.8494850021680094 0.0 + + {[DA]|[EG]}DVETSKKW;{[DA]|[EG]}DVTSEKKW;{[DA]|[EG]}DVTS{[TV]|[{I|L}S]}GKW;{[DA]|[EG]}DV[WM]KKW;{[DA]|[EG]}D{[WT]|[RM]}EKKW;{[DA]|[EG]}D{[WT]|[RM]}{[TV]|[{I|L}S]}GKW;{[DA]|[EG]}D[R{M(Oxidation (M))|F}][{I|L}A]GKW;{[DA]|[EG]}[MT]W[{I|L}A]GKW;W[MT][DP]SKKW;[KS]TKEW[DV]{[DA]|[EG]} 7.8278;7.205;5.9154;5.8276;5.7805;4.4872;3.8058;3.1256;3.0195;1.067 +;-;-;-;-;-;-;-;-;- + 481 + 1 2.405 61525.4 1.0 1249 3182 4429 DOHH2_400M_050219_1,4433 DOHH2_400M_050219_1,4433,GEDVETSKKW True True GEDVETSKKW 23.121921 589.788317859173 11503651.25 4429.0 ENSG00000107223|ENST00000224073|EDF1;;nc|ENSG00000107223|O60869-2|EDF1;;nc|ENSG00000107223|O60869-3|EDF1 8.466244379679361 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4434 23.126 201.0 269610.0 25 0 33993.0 40317 VGYFSSGAF 9 92 467.7171880930396 933.4198232528792 2 467.7170287966728 MULTI CID FTMS 0 0 0 4429 245958.859375 0.7450685384596161 -4 0.1506233215332031 5 Unmodified _VGYFSSGAF_ ENST00000378700.7_2_6:19837725-19837965:+|nuORF 12.531546534597751 0.4974689918368763 1 ANG{[HG]|PP}AW 7 7 22.981 0.0 0.0 2.462 0.0 0.0 222.1011109499479 0.0 222.1011109499479 0.0 4.362591709212182 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 ANG{[HG]|PP}AW 2.462 - 186 + 1 2.405 47700.8 1.0 1250 3182 4429 DOHH2_400M_050219_1,4434 DOHH2_400M_050219_1,4434,VGYFSSGAF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4436 23.131 116.0 498380.0 25 0 37278.0 + 10641 FVQLCPYKGQG 11 82 620.3130774713335 1238.6116020094669 2 620.3135253787041 MULTI CID FTMS 0 0 0 4435 384415.96875 0.6738367120360594 -37 1.446941375732422 1 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 1 {[HG]|PP}AMPPPPPPQN 12 -1 {[HG]|PP}AM + + 74.81 10.177 2.5688 6.0398 6.0398 60.423 0.0 0.0 0.0 0.0 56.72773663651752 0.0 0.0 0 2.7302046884880937 0.0 0.0 1.6184151806525389 {[HG]|PP}AMPPPPPPQN 6.0398 - 1296 + 1 2.405 47803.2 1.0 1251 3183 4435 DOHH2_400M_050219_1,4436 DOHH2_400M_050219_1,4436,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4437 23.136 266.0 324720.0 25 0 23554.0 + 14164 IDDALGAQY 9 117 483.2327238855315 964.4508948378632 2 483.2331115603447 MULTI CID FTMS 0 0 0 4435 248537.515625 0.1987685135219163 -8 0.3175849914550781 2 Unmodified _IDDALGAQY_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 36.04419817259434 0.0971720506436186 1 [PG]TEVTAQY 9 -1 + 38.02 0.0 0.0 3.9422 3.9422 83.166 0.0 0.0 0.0 1.0601296786577166 20.510040846244184 1.0601296786577166 13.583946152345804 0 0.6822333069283655 0.0 2.110924374808178 0.0 [PG]TEVTAQY;[TA][DP]VTAQY;[DP][TA]VTAQY;[DP]V[TA]TAQY;[AG]Y[RH]AQY;[YQ][RH]AQY 3.9422;2.5337;2.1344;1.8912;1.8146;0.96288 -;-;-;-;-;- 575 1 2.405 69603.0 1.0 1252 3183 4435 DOHH2_400M_050219_1,4437 DOHH2_400M_050219_1,4437,IDDALGAQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4438 23.14 203.0 560140.0 25 0 50789.0 + -1 ESDPPCCLVTY 11 105 447.5217262351596 1339.5433493056787 3 447.5216552615166 MULTI CID FTMS 0 0 0 4435 202370.953125 1.0 0 0.0 3 2 Carbamidomethyl (C) _ESDPPC(Carbamidomethyl (C))C(Carbamidomethyl (C))LVTY_ REV__nc|ENSG00000108813|Q92988-2|DLX4;REV__nc|ENSG00000108813|Q92988-3|DLX4 9.764250979337303 0.8290795630453686 1 {I|L}GSDTDY 7 -1 47.444 0.0 0.0 3.5418 0.0 0.0 570.2279530255875 0.0 570.2279530255875 0.0 33.93228425710076 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 {I|L}GSDTDY 3.5418 - 178 1 2.405 95062.9 1.0 1253 3183 4435 DOHH2_400M_050219_1,4438 DOHH2_400M_050219_1,4438,ESDPPCCLVTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4439 23.153 800.0 130100.0 25 0 6728.3 + + 8373 DTDARFGHGSDY 12 107 670.7792015495097 1339.543850165819 2 670.7790405154228 MULTI CID FTMS 0 0 0 4435 119867.8203125 0.9351638018245808 -1 0.0153217315673828 4 2 Carbamidomethyl (C) _ESDPPC(Carbamidomethyl (C))C(Carbamidomethyl (C))LVTY_ ENSG00000137776|ENST00000380516|SLTM;nc|ENSG00000137776|Q9NWH9-3|SLTM 41.8396318013385 0.1840573104808743 1 DTD{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}GHGSDY 12 -1 + 100.44 0.0 0.0 7.498 7.498 85.834 0.0 0.0 0.0 6.827417515368438 6.827417515368438 6.827417515368438 3.564921830680703 0 4.024227503252014 2.0 1.113982988912431 0.3807196863200844 DTD{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}GHGSDY;DTD[{M(Oxidation (M))|F}V]GKHGSDY;DTD[{M(Oxidation (M))|F}V]KGHGSDY;{[ES]|[DT]|[{I|L}C]}D{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}GHGSDY;DT[HS]HGKHGSDY;DT[HS]HG{M(Oxidation (M))|F}[YV]DY;DT[HS]HKGHGSDY;{[DS]|[MA]|[CV]|TT}E{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}GHGSDY;{[ES]|[DT]|[{I|L}C]}D[{M(Oxidation (M))|F}V]KGHGSDY;{[ES]|[DT]|[{I|L}C]}D[{M(Oxidation (M))|F}V]GKHGSDY 7.498;7.2318;7.1076;6.9883;6.5234;6.498;6.3992;6.3522;6.2792;6.155 -;-;-;-;-;-;-;-;-;- 1554 + 1 2.405 79702.4 0.5899999737739563 1254 3183 4435 DOHH2_400M_050219_1,4439 DOHH2_400M_050219_1,4439,ESDPPCCLVTY False False DTDARFGHGSDY 23.153346 670.779040515423 1680368.9375 4435.0 ENSG00000137776|ENST00000380516|SLTM;;nc|ENSG00000137776|Q9NWH9-3|SLTM 9.730630238850912 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4442 23.174 800.0 148970.0 25 0 7049.6 + 6511 EAKQRLQQL 9 150 557.3223377455638 1112.6301225579275 2 557.3230468630791 MULTI CID FTMS 0 0 0 4441 69210.875 0.0356157563379941 -11 0.3693714141845703 1 Unmodified _EAKQRLQQL_ ENSG00000196683|ENST00000358435|TOMM7;ENST00000463284.2_1_7:22852718-22862419:-|nuORF;ENST00000496129.1_1_7:22857608-22862419:-|nuORF 81.89019881105858 0.0170587746866453 1 QE{I|L} 3 7 33.614 0.0 0.0 3.0212 0.0 0.0 724.4361439435562 0.0 724.4361439435562 0.0 0.4659780392387347 0.0 0.0 0 0.1307196863200844 0.0 0.4247425010840047 0.4247425010840047 QE{I|L} 3.0212 - 431 1 2.405 93593.3 0.5400000214576721 1255 3185 4441 DOHH2_400M_050219_1,4442 DOHH2_400M_050219_1,4442,EAKQRLQQL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4443 23.187 800.0 83431.0 25 0 3470.5 -1 VLQEMEMLNAF 11 96 678.8131565089875 1355.611760084775 2 678.8121215701103 MULTI CID FTMS 0 0 0 4441 90821.890625 1.0 0 0.0 2 2 Oxidation (M) _VLQEM(Oxidation (M))EM(Oxidation (M))LNAF_ ENSG00000073969|ENST00000398238|NSF;nc|ENSG00000073969|P46459-2|NSF 14.40537977576856 0.7354982482299568 1 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F} 13 -1 + 87.35 0.0 0.0 6.4436 6.4436 87.951 0.0 0.0 0.0 12.839966563651998 16.642078980768062 12.839966563651998 9.072459467631006 0 0.5387254899964358 0.9208187539523752 0.0 1.6549471895720984 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA[HV]EA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA[HV]EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA[HV]EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}Q[HV]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG[HV]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA[HV]K{[CP]|[EA]}QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[HV]EAQQNA{M(Oxidation (M))|F};EE[YK]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q[HV]EA[AG]QNA{M(Oxidation (M))|F} 6.4436;5.7743;5.7743;5.7743;5.6728;5.6471;5.5045;5.4964;5.0938;5.0016 -;-;-;-;-;-;-;-;-;- 945 1 2.405 51475.5 0.5299999713897705 1256 3185 4441 DOHH2_400M_050219_1,4443 DOHH2_400M_050219_1,4443,VLQEMEMLNAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4444 23.201 800.0 54302.0 25 0 11839.0 -1 0 34 1180.486007538006 3538.4361932142183 3 1180.823046863079 MULTI CID FTMS 0 0 0 4441 86222.9453125 0.8462680444307445 1 -0.0440711975097656 3 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.405 44551.7 0.3799999952316284 1257 3185 4441 DOHH2_400M_050219_1,4444 DOHH2_400M_050219_1,4444, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4447 23.222 800.0 274310.0 25 0 67204.0 + 30461 READQPLRTY 10 125 624.8201929173671 1247.625832901534 2 624.8212768435478 MULTI CID FTMS 0 0 0 4446 121324.3828125 0.1707895975303128 -9 0.2455005645751953 1 Unmodified _READQPLRTY_ ENSG00000145041|ENST00000684031|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;nc|ENSG00000145041|Q9Y4B6-3|DCAF1 54.25910826236882 0.0551533711159658 1 [VG]EWQ[{I|L}P]RTY 10 4 + 73.042 0.0 0.0 5.8545 5.8545 86.683 0.0 0.0 0.0 56.5887975618773 12.306634937682157 12.306634937682157 9.164539485499256 0 2.5114393726401687 2.0 0.3807196863200844 0.75 [VG]EWQ[{I|L}P]RTY;[VG]EW[AG][{I|L}P]RTY;[VG]EW{[VA]|[{I|L}G]}[PA]RTY;RE{[DA]|[EG]}Q[{I|L}P]RTY;[TP]SWQ[{I|L}P]RTY;[VG]{[HG]|PP}QY[PA]RTY;[TP]SW[AG][{I|L}P]RTY;REW{[VA]|[{I|L}G]}[RV]{M(Oxidation (M))|F}W;[W{I|L}][DG]Q[{I|L}P]RTY;[TP]SW{[VA]|[{I|L}G]}[PA]RTY 5.8545;5.12;4.6624;4.2515;3.8098;3.1331;3.0752;2.9583;2.8667;2.6177 -;-;-;+;-;-;-;-;-;- + 543 + 1 2.408 160615.2 0.7400000095367432 1258 3187 4446 DOHH2_400M_050219_1,4447 DOHH2_400M_050219_1,4447,READQPLRTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4448 23.226 207.0 388860.0 25 0 21222.0 + 7314 EEVRQGLKAY 10 128 398.2155395100307 1191.624789130292 3 398.2149536013603 MULTI CID FTMS 0 0 0 4446 207980.015625 0.4804109770885611 -6 0.1418666839599609 2 Unmodified _EEVRQGLKAY_ ENSG00000108010|ENST00000331244|GLRX3;ENSG00000108010|ENST00000331244|GLRX3 21.59015148037692 0.4836074274810599 1 EEV[Q{I|L}]{[NV]|[RG]}KAY 10 2 + 36.872 0.0 0.0 3.0943 3.0943 80.572 0.0 0.0 0.0 12.887210802544343 12.887210802544343 12.887210802544343 12.887210802544343 0 0.0 1.0969100130080565 0.0 0.9247425010840048 EEV[Q{I|L}]{[NV]|[RG]}KAY;{[QV]|[N{I|L}]|[RA]|[KV]}{[QV]|[N{I|L}]|[RA]|[KV]}VTYV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[RV][QA]VTYV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[AG][R{I|L}]GVTYV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QV]|[N{I|L}]|[RA]|[KV]}{[QV]|[N{I|L}]|[RA]|[KV]}VTWW{M(Oxidation (M))|F};[AG]V{[QV]|[N{I|L}]|[RA]|[KV]}VTYV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[RV]AAGVTYV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[AG][R{I|L}]RTYV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[RV][QA]VTWW{M(Oxidation (M))|F};[AG][R{I|L}]GVTWW{M(Oxidation (M))|F} 3.0943;2.0128;1.5177;1.446;1.3977;1.3795;1.2304;0.90447;0.90269;0.82726 -;-;-;-;-;-;-;-;-;- 316 + 1 2.408 68368.7 1.0 1259 3187 4446 DOHH2_400M_050219_1,4448 DOHH2_400M_050219_1,4448,EEVRQGLKAY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4449 23.23 230.0 310890.0 25 0 102900.0 + 30474 REAPERPSL 9 64 527.7855211442238 1053.5564893552475 2 527.7857543826103 MULTI CID FTMS 0 0 0 4446 161166.4375 0.4581937716416684 -8 0.2084465026855468 3 Unmodified _REAPERPSL_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000489266.5_1_10:123734227-123734680:-|nuORF;nc|ENSG00000107672|Q9NXX6-2|NSMCE4A 12.872603262515298 0.4882369880199512 1 [VG]EA[EP]R 7 5 24.459 0.0 0.0 2.3216 0.0 0.0 0.0 312.15607629947505 312.15607629947505 7.0509164228652565 0.0 0.0 0.0 0 0.8807196863200843 1.0457574905606752 0.0 0.0 [VG]EA[EP]R 2.3216 - 46 + 1 2.408 61816.3 1.0 1260 3187 4446 DOHH2_400M_050219_1,4449 DOHH2_400M_050219_1,4449,REAPERPSL False True REAPERPSL 23.22996 527.78575438261 2074377.875 4446.0 ENSG00000107672|ENST00000369023|NSMCE4A;;ENST00000489266.5_1_10:123734227-123734680:-|nuORF;;nc|ENSG00000107672|Q9NXX6-2|NSMCE4A 6.577012062072754 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4451 23.235 32.0 2314500.0 25 0 257310.0 + 29018 QEDRPGLHAY 10 100 395.8596983230945 0 395.8596069216728 PEAK CID FTMS 0 0 0 4450 1397274.5 0.8358175876923868 -3 0.0727424621582031 1 Unmodified _QEDRPGLHAY_ ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1 51.41523569358685 0.0410586899153668 1 HA 2 8 6.4537 0.0 0.0 0.81722 0.0 0.0 400.5373765272452 178.05127893619377 578.588655463439 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + HA 0.81722 + + 34 + 1 2.408 64110.3 1.0 1261 3188 4450 DOHH2_400M_050219_1,4451 DOHH2_400M_050219_1,4451,QEDRPGLHAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4452 23.237 107.0 662370.0 25 0 118400.0 + 15687 IQRLETMK 8 80 509.7893255209455 1017.564098108691 2 509.7894164919853 MULTI CID FTMS 0 0 0 4450 457815.15625 0.1448603012934397 8 -0.1238079071044921 2 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 1 TMK 3 -1 41.682 0.0 0.0 4.0963 0.0 0.0 639.3711148742457 0.0 639.3711148742457 0.0 18.494850021680094 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 TMK 4.0963 + + 172 1 2.408 65701.6 1.0 1262 3188 4450 DOHH2_400M_050219_1,4452 DOHH2_400M_050219_1,4452,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4453 23.239 73.0 781780.0 25 0 53300.0 29677 QPDFELHAI 9 106 535.2671454647043 1068.5197379962085 2 535.2674438357353 MULTI CID FTMS 0 0 0 4450 708736.875 0.8159227026277946 -6 0.1195240020751953 3 Unmodified _QPDFELHAI_ ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4 16.942295170755138 0.3780752226737986 1 A{I|L} 2 7 22.206 0.0 0.0 2.0782 0.0 0.0 866.387472836832 0.0 866.387472836832 0.0 9.982653242032455 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 + A{I|L} 2.0782 + + 119 + 1 2.408 48551.1 1.0 1263 3188 4450 DOHH2_400M_050219_1,4453 DOHH2_400M_050219_1,4453,QPDFELHAI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4454 23.247 450.0 327710.0 25 0 32018.0 + 7315 EEVRQGLKAY 10 120 596.8197992025368 1191.6250454718736 2 596.8198730349541 MULTI CID FTMS 0 0 0 4450 247018.234375 0.67205999495142 -7 0.166513442993164 4 Unmodified _EEVRQGLKAY_ ENSG00000108010|ENST00000331244|GLRX3;ENSG00000108010|ENST00000331244|GLRX3 87.12335221954112 0.0112299488529474 1 EEVRQG{I|L}KAY 10 0 + 88.343 0.0 0.0 7.4137 7.4137 90.636 0.0 0.0 0.0 25.56658097810802 16.53212513775344 16.53212513775344 9.164539485499247 0 2.048455006504028 1.2218487496163564 2.579689690656103 0.0 + + EEVRQG{I|L}KAY;EEVR[AG]G{I|L}KAY;[QA]AK{I|L}GQDKAY;[QA]AK{I|L}QGDKAY;[QA]AK{I|L}GAGDKAY;[QA][RV]VEEKAY;{[QV]|[N{I|L}]|[RA]|[KV]}{[ES]|[DT]|[{I|L}C]}[TP]G{I|L}KAY;[YT]VP{I|L}[HT]KAY;{[QV]|[N{I|L}]|[RA]|[KV]}[PS]{[ET]|[MV]}G{I|L}KAY;[YT]VP[HT]{I|L}KAY 7.4137;6.6446;5.2681;5.1455;5.1138;5.0315;4.4386;4.3733;4.3087;4.2662 +;-;-;-;-;-;-;-;-;- + 1351 1 2.408 111295.8 1.0 1264 3188 4450 DOHH2_400M_050219_1,4454 DOHH2_400M_050219_1,4454,EEVRQGLKAY True True EEVRQGLKAY 23.246728 596.819873034954 3514825.875 4450.0 ENSG00000108010|ENST00000331244|GLRX3 6.752997716267903 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4456 23.253 165.0 408810.0 25 0 41643.0 + 30463 READQPLRTY 10 72 416.8824115754461 1247.6254053265384 3 416.8822509646416 MULTI CID FTMS 0 0 0 4455 329303.90625 0.4578985255091505 -7 0.1363067626953125 1 Unmodified _READQPLRTY_ ENSG00000145041|ENST00000684031|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;nc|ENSG00000145041|Q9Y4B6-3|DCAF1 57.2037768669896 0.0439211711061507 1 {[RE]|[WV]}ADQ 5 5 54.651 0.0 0.0 4.3804 0.0 0.0 0.0 645.3366994897692 645.3366994897692 28.958004298066403 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.5649093276264391 1.0189301784845295 + {[RE]|[WV]}ADQ 4.3804 + + 63 1 2.408 64118.7 1.0 1265 3189 4455 DOHH2_400M_050219_1,4456 DOHH2_400M_050219_1,4456,READQPLRTY True True READQPLRTY 23.25252 416.882250964642 15975043.5 4455.0 nc|ENSG00000145041|Q9Y4B6-2|DCAF1;;nc|ENSG00000145041|Q9Y4B6-3|DCAF1;;ENSG00000145041|ENST00000684031|DCAF1 8.539687633514404 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4457 23.256 197.0 256150.0 25 0 28016.0 + 7055 EELGHTETY 9 88 539.7380497173185 1077.461546501437 2 539.7387573122978 MULTI CID FTMS 0 0 0 4455 135545.671875 0.574643889854991 -4 0.0895252227783203 2 Unmodified _EELGHTETY_ ENSG00000064932|ENST00000361757|SBNO2;ENST00000592222.5_1_19:1115804-1132196:-|nuORF;nc|ENSG00000064932|Q9Y2G9-3|SBNO2 23.1484247019978 0.2366544122328345 1 [{M(Oxidation (M))|F}T]YE{I|L}DQY 8 8 + 34.11 0.0 0.0 3.1658 3.1658 79.381 0.0 0.0 0.0 5.133418048066787 13.179869269742554 5.133418048066787 9.262137858390812 0 0.0 0.0 0.8807196863200843 0.0 [{M(Oxidation (M))|F}T]YE{I|L}DQY;[{M(Oxidation (M))|F}T]YE{I|L}D[AG]Y;[DP]PD{I|L}EY{[ET]|[MV]};[DP]PDNKY{[ET]|[MV]};EE[KA]Y[HC][QA];{[ES]|[DT]|[{I|L}C]}[HA]{I|L}EY{[ET]|[MV]};[DP]PTQQY{[ET]|[MV]};{[WN]|[YH]}E[DC]{[{M(Oxidation (M))|F}H]|[RQ]}K;EE[KA]{[QC]|[C(Carbamidomethyl (C))A]}A{[WN]|[YH]};[DP]PDGGKY{[ET]|[MV]} 3.1658;2.3062;1.9426;1.5417;1.2164;0.96126;0.80966;0.80134;0.77362;0.68712 -;-;-;-;-;-;-;-;-;- 459 + 1 2.408 43553.2 1.0 1266 3189 4455 DOHH2_400M_050219_1,4457 DOHH2_400M_050219_1,4457,EELGHTETY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4458 23.259 138.0 621910.0 25 0 129940.0 + 37099 TGSLILVLE 9 93 472.7858673141282 943.5571816950564 2 472.7852661013603 MULTI CID FTMS 0 0 0 4455 307850.78125 0.8191601600730949 -7 0.1363067626953125 3 Unmodified _TGSLILVLE_ REV__ENSG00000177807|ENST00000644903|KCNJ10 7.910154910731844 0.6385446671287552 1 {[SA]|[TG]}{I|L}{I|L}S{I|L}{I|L}A 8 -1 19.442 0.0 0.0 2.0605 0.0 0.0 0.0 172.07346400356963 172.07346400356963 6.905688358779262 0.0 0.0 0.0 0 0.0 1.154901959985743 0.4247425010840047 0.0 {[SA]|[TG]}{I|L}{I|L}S{I|L}{I|L}A 2.0605 - 61 1 2.408 71688.4 1.0 1267 3189 4455 DOHH2_400M_050219_1,4458 DOHH2_400M_050219_1,4458,TGSLILVLE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4460 23.27 463.0 173020.0 25 0 17341.0 + -1 RTCLEHFV 8 116 531.2653940793048 1060.5162352254094 2 531.2639037966728 MULTI CID FTMS 0 0 0 4459 102498.609375 0.505634314906695 9 -0.1546764373779297 1 Carbamidomethyl (C) _RTC(Carbamidomethyl (C))LEHFV_ REV__ENSG00000154822|ENST00000615277|PLCL2;REV__nc|ENSG00000154822|Q9UPR0-2|PLCL2;REV__nc|ENSG00000154822|Q9UPR0-3|PLCL2 5.230669730166228 0.792582437072536 1 Y 1 -1 10.837 0.0 0.0 1.0219 0.0 0.0 879.4419534644704 0.0 879.4419534644704 0.0 1.3045638622799949 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0219 - 25 + 1 2.408 68079.4 1.0 1268 3190 4459 DOHH2_400M_050219_1,4460 DOHH2_400M_050219_1,4460,RTCLEHFV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4461 23.273 171.0 404870.0 25 0 145840.0 + 19068 EVLNKHSL 8 87 470.2557939230291 938.4970349128582 2 470.2561218142509 MULTI CID FTMS 0 0 0 4459 141009.859375 0.6074283481204154 -7 0.1332874298095703 2 Unmodified _LDQRAHSL_ nc|ENSG00000099783|P52272-2|HNRNPM;ENST00000597813.5_1_19:8528492-8528615:+|nuORF;ENSG00000099783|ENST00000325495|HNRNPM 16.942295170755138 0.6606234159769251 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}KNHS{I|L} 8 3 + 60.352 0.0 0.0 6.4307 6.4307 87.963 0.0 0.0 0.0 39.94303369353839 16.09453910729721 16.09453910729721 9.075221787320515 0 0.4247425010840047 2.0 0.805462187404089 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}KNHS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}NKHS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}KGGHS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}GGKHS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]KQS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}H[{M(Oxidation (M))|F}V][VP];{NN|[MP]|[D{I|L}]|[EV]}[HV]K[AG]S{I|L} 6.4307;5.4637;5.4438;4.4768;3.5074;2.9435;2.5204 -;-;-;-;-;-;- 108 + 1 2.408 58724.5 1.0 1269 3190 4459 DOHH2_400M_050219_1,4461 DOHH2_400M_050219_1,4461,LDQRAHSL False False EVLNKHSL 23.273139 470.256121814251 311802.3125 4459.0 nc|ENSG00000099783|P52272-2|HNRNPM;;ENST00000597813.5_1_19:8528492-8528615:+|nuORF;;ENSG00000099783|ENST00000325495|HNRNPM 3.892889420191447 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4462 23.28 383.0 247740.0 25 0 57855.0 + 33006 SENPAKRLY 9 117 359.8606850143916 1076.560225643375 3 359.8608276247978 MULTI CID FTMS 0 0 0 4459 90108.1796875 0.9198165924864964 -8 0.1486091613769531 3 Unmodified _SENPAKRLY_ ENSG00000071462|ENST00000265758|BUD23;ENST00000432522.5_1_7:73101195-73108381:+|nuORF;ENST00000463307.5_1_7:73097949-73107126:+|nuORF;ENST00000496153.5_1_7:73097949-73108381:+|nuORF;nc|ENSG00000071462|O43709-2|BUD23;nc|ENSG00000071462|O43709-3|BUD23 26.88365393820708 0.1891292719743517 1 PAK[YR]{I|L} 6 5 15.406 0.0 0.0 1.431 0.0 0.0 330.1151303629013 0.0 330.1151303629013 0.0 4.1470152574386905 0.0 0.0 0 0.0 0.0 0.0 0.0 PAK[YR]{I|L} 1.431 - 53 + 1 2.408 80553.8 1.0 1270 3190 4459 DOHH2_400M_050219_1,4462 DOHH2_400M_050219_1,4462,SENPAKRLY False True SENPAKRLY 23.279999 359.860827624798 711687.625 4459.0 ENST00000432522.5_1_7:73101195-73108381:+|nuORF;;ENST00000463307.5_1_7:73097949-73107126:+|nuORF;;ENST00000496153.5_1_7:73097949-73108381:+|nuORF;;nc|ENSG00000071462|O43709-2|BUD23;;ENSG00000071462|ENST00000265758|BUD23;;nc|ENSG00000071462|O43709-3|BUD23 4.948556741078694 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4463 23.285 265.0 221520.0 25 0 18355.0 -1 VTEMAFHH 8 94 494.2234072101033 986.4322614870066 2 494.2243224978447 MULTI CID FTMS 0 0 0 4459 82434.515625 0.7084745337089172 -4 0.0577564239501953 4 Oxidation (M) _VTEM(Oxidation (M))AFHH_ nc|ENSG00000079385|P13688-9|CEACAM1 19.438996006549623 0.6237395211498085 1 VTE 3 -1 46.44 0.0 0.0 4.7079 0.0 0.0 0.0 654.2517721791658 654.2517721791658 31.49166239860314 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 VTE 4.7079 + + 140 + 1 2.408 50928.8 1.0 1271 3190 4459 DOHH2_400M_050219_1,4463 DOHH2_400M_050219_1,4463,VTEMAFHH False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4467 23.305 560.0 206720.0 25 0 13518.0 + 2033 APGRNVQLQI 10 165 365.879076417441 1094.615399852523 3 365.8799926638603 MULTI CID FTMS 0 0 0 4466 18887.43359375 0.2153059504215695 -2 0.00787353515625 1 Unmodified _APGRNVQLQI_ REV__ENST00000557781.5_1_12:57498159-57499088:-|nuORF 9.5439744041441 0.6824900257974675 1 Q{I|L}[QT]{M(Oxidation (M))|F}S{I|L} 7 -1 22.537 0.0 0.0 2.0589 0.0 0.0 259.15307088839967 0.0 259.15307088839967 0.0 11.11735303661126 0.0 0.0 0 0.0 0.0 0.535666875892183 0.5 Q{I|L}[QT]{M(Oxidation (M))|F}S{I|L} 2.0589 - 191 + 1 2.408 95747.4 1.0 1272 3193 4466 DOHH2_400M_050219_1,4467 DOHH2_400M_050219_1,4467,APGRNVQLQI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4469 23.321 800.0 111720.0 25 0 5738.5 + 8507 ETDRGMSAEY 10 141 579.7400470958429 1157.4655412584857 2 579.7400390505791 MULTI CID FTMS 0 0 0 4468 83493.8046875 0.0283542024215776 16 -0.3865680694580078 1 Unmodified _ETDRGMSAEY_ ENSG00000100347|ENST00000350028|SAMM50 24.99096001346401 0.4071966087057876 1 SAEY 4 6 43.716 0.0 0.0 3.7769 0.0 0.0 689.2840443341812 0.0 689.2840443341812 0.0 14.06804392152253 0.0 0.0 0 0.5 0.0 1.305462187404089 0.0 + SAEY 3.7769 + + 229 1 2.408 69984.1 0.5 1273 3194 4468 DOHH2_400M_050219_1,4469 DOHH2_400M_050219_1,4469,ETDRGMSAEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4471 23.326 100.0 766680.0 25 0 59226.0 + 29017 QEDRPGLHAY 10 85 593.2874118044306 1184.560270675661 2 593.2863647341728 MULTI CID FTMS 0 0 0 4470 532818.0 0.7945837999037748 3 -0.0824508666992187 1 Unmodified _QEDRPGLHAY_ ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1 80.89551112106177 0.0163339094631175 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DR[PG]{I|L}HAY 10 0 + 66.294 0.0 0.0 5.5965 5.5965 90.43 0.0 0.0 0.0 20.1083763065447 43.76693822327232 20.1083763065447 22.97081428868173 0 2.417735320183944 0.0 0.6139829889124311 1.7614393726401687 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DR[PG]{I|L}HAY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DRH{I|L}[PG]AY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DRH{I|L}[KP]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DRH{I|L}[QP]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DR[QA][Y{I|L}]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DR[QA]{NN|[MP]|[D{I|L}]|[EV]}[NP] 5.5965;3.6573;2.3624;2.3624;2.2409;0.32803 +;-;-;-;-;- + 173 1 2.408 59488.7 1.0 1274 3195 4470 DOHH2_400M_050219_1,4471 DOHH2_400M_050219_1,4471,QEDRPGLHAY True True QEDRPGLHAY 23.325934 593.286364734173 22890190.5 4470.0 ENSG00000130592|ENST00000311604|LSP1;;nc|ENSG00000130592|P33241-3|LSP1;;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;;nc|ENSG00000130592|P33241-2|LSP1 9.554811159769692 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4472 23.34 800.0 130850.0 25 0 9607.5 + 16477 KAISKNVL 8 136 436.7824851954728 871.5504174577457 2 436.7819396853447 MULTI CID FTMS 0 0 0 4470 87794.4375 1.0 0 0.0 2 Unmodified _KAISKNVL_ ENSG00000188191|ENST00000537384|PRKAR1B 45.69961567697781 0.159474709770503 1 GA{I|L}SKNV{I|L} 8 1 21.169 0.0 0.0 2.4289 0.0 0.0 71.07433516670078 0.0 71.07433516670078 0.0 7.154725401081734 0.0 0.0 0 1.4336068845642205 0.0 0.0 0.0 GA{I|L}SKNV{I|L} 2.4289 - 319 1 2.408 82161.5 0.4099999964237213 1275 3195 4470 DOHH2_400M_050219_1,4472 DOHH2_400M_050219_1,4472,KAISKNVL False True KAISKNVL 23.340082 436.781939685345 321358.75 4470.0 ENSG00000188191|ENST00000537384|PRKAR1B 1.350870008269946 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4473 23.354 800.0 144410.0 25 0 7735.2 -1 0 147 578.3382450194333 577.3309685528333 1 578.3388549685478 MULTI CID FTMS 0 0 0 4470 106554.0546875 0.0452899133520677 -102 2.4722938537597656 3 1 Y 1 -1 11.42 0.0 0.0 1.9781 0.0 0.0 396.25654946279263 0.0 396.25654946279263 0.0 3.6245286921520936 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.9781 - 33 + 1 2.408 89618.4 0.5400000214576721 1276 3195 4470 DOHH2_400M_050219_1,4473 DOHH2_400M_050219_1,4473, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4475 23.361 234.0 549270.0 25 0 142090.0 + 11076 GEDVETSKKW 10 129 393.5280385784296 1177.5622863354888 3 393.5276061892509 MULTI CID FTMS 0 0 0 4474 156554.171875 0.1926322252174303 10 -0.2939414978027344 1 Unmodified _GEDVETSKKW_ ENSG00000107223|ENST00000224073|EDF1;nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1 19.986897341741983 0.5121812865880797 1 {[DA]|[EG]}DVE{[MG]|[TS]}KKW 10 0 + 43.192 0.0 0.0 3.6679 3.6679 77.648 0.0 0.0 0.0 31.202298165592133 2.517898162424963 2.517898162424963 7.769250191953667 0 0.3494850021680094 1.6989700043360187 0.4247425010840047 0.0 + + {[DA]|[EG]}DVE{[MG]|[TS]}KKW;{[DA]|[EG]}DV[WM]KKW;{[DA]|[EG]}DVEKK{[MG]|[TS]}W;{[DA]|[EG]}D[R{M(Oxidation (M))|F}]E[{I|L}A]{[QN]|[E{I|L}]|[KN]};{[DA]|[EG]}DV[W{M(Oxidation (M))|F}][{I|L}A]{[QN]|[E{I|L}]|[KN]};W[MT]WE[{I|L}A]{[QN]|[E{I|L}]|[KN]};WDV[C(Carbamidomethyl (C))M]{I|L}{I|L}{[QN]|[E{I|L}]|[KN]} 3.6679;3.0081;2.9399;2.2721;2.16;1.3557;1.2435 +;-;-;-;-;-;- + 178 + 1 2.408 104872.3 1.0 1277 3196 4474 DOHH2_400M_050219_1,4475 DOHH2_400M_050219_1,4475,GEDVETSKKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4476 23.37 514.0 255070.0 25 0 41681.0 + 7379 EGFPRRAV 8 131 466.2597799200801 930.5050069069604 2 466.2583801150322 MULTI CID FTMS 0 0 0 4474 127973.3984375 0.6028105776680704 -13 0.2280101776123047 2 Unmodified _EGFPRRAV_ ENSG00000106009|ENST00000340611|BRAT1;ENST00000469750.5_1_7:2577705-2579570:-|nuORF;nc|ENSG00000106009|Q6PJG6-3|BRAT1 14.838274106304384 0.6917062315640577 1 VEE 3 8 49.468 0.0 0.0 5.3163 0.0 0.0 0.0 570.3137911432249 570.3137911432249 33.96148995015648 0.0 0.0 0.0 0 0.0968040358200661 2.0 0.3807196863200844 0.0 VEE 5.3163 - 176 + 1 2.408 106314.4 1.0 1278 3196 4474 DOHH2_400M_050219_1,4476 DOHH2_400M_050219_1,4476,EGFPRRAV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4477 23.384 800.0 129020.0 25 0 28930.0 + + -1 REEYRGGNNW 10 102 640.7924379318408 1279.5703229304816 2 640.7928954958916 MULTI CID FTMS 0 0 0 4474 81952.1328125 0.979767417771627 1 -0.0434932708740234 3 Carbamidomethyl (C) _WEVC(Carbamidomethyl (C))RHHAW_ ENST00000358746.6_1_5:94886290-94886347:-|nuORF 10.823927491677226 0.5436922275383211 1 WMP 3 -1 29.693 0.0 0.0 2.3205 0.0 0.0 0.0 862.3576143854124 862.3576143854124 16.197887582883936 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 WMP 2.3205 - 132 + 1 2.408 80769.4 0.5199999809265137 1279 3196 4474 DOHH2_400M_050219_1,4477 DOHH2_400M_050219_1,4477,WEVCRHHAW False False REEYRGGNNW 23.383573 640.792895495892 498116.90625 4474.0 ENST00000358746.6_1_5:94886290-94886347:-|nuORF 0.7816855609416962 2.0 False 10.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 4478 23.397 800.0 212820.0 25 0 57284.0 -1 0 148 498.2918697138836 497.2845932472836 1 498.2898132205009 MULTI CID FTMS 0 0 0 4474 94105.5078125 0.6178375903610502 -1 0.0326213836669921 4 1 Y 1 -1 12.218 0.0 0.0 2.457 0.0 0.0 316.2100063105633 0.0 316.2100063105633 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.457 - 47 + 1 2.408 129977.8 0.4699999988079071 1280 3196 4474 DOHH2_400M_050219_1,4478 DOHH2_400M_050219_1,4478, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4480 23.402 20.0 2823400.0 25 0 513230.0 + 45444 YTDVSTRY 8 63 502.7378876762718 1003.4612224193436 2 502.7379943728447 MULTI CID FTMS 0 0 0 4479 2295754.75 0.3164085924584445 7 -0.1848926544189453 1 Unmodified _YTDVSTRY_ ENSG00000213593|ENST00000278422|TMX2;ENST00000436507.2_1_9:37885847-37886384:+|nuORF;nc|ENSG00000213593|Q9Y320-2|TMX2 39.94969957227396 0.2351327405675156 1 YTDVS 5 3 70.261 0.0 0.0 7.0018 0.0 0.0 0.0 435.20115076236567 435.20115076236567 57.28515242277695 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3807196863200844 0.0 + YTDVS 7.0018 + + 101 + 1 2.397 49151.6 1.0 1281 3197 4479 DOHH2_400M_050219_1,4480 DOHH2_400M_050219_1,4480,YTDVSTRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4481 23.404 68.0 682200.0 25 0 51336.0 + 14165 IDDALGAQY 9 88 483.2327238855315 964.4508948378632 2 483.2325317263603 MULTI CID FTMS 0 0 0 4479 665717.625 0.5324093725401361 6 -0.1541118621826172 2 Unmodified _IDDALGAQY_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 28.486842064014134 0.1687311288560894 1 QY 2 -1 24.693 0.0 0.0 2.5603 0.0 0.0 655.3166612946975 0.0 655.3166612946975 0.0 9.779064276371187 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 QY 2.5603 + + 298 + 1 2.397 42518.7 1.0 1282 3197 4479 DOHH2_400M_050219_1,4481 DOHH2_400M_050219_1,4481,IDDALGAQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4483 23.409 112.0 586450.0 25 0 32423.0 + 10642 FVQLCPYKGQG 11 92 620.3130774713335 1238.6116020094669 2 620.3135864138603 MULTI CID FTMS 0 0 0 4482 445073.46875 0.7801622907918907 -22 0.5438632965087891 1 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 1 {[HG]|PP}MAPPPPPPQN 12 -1 {[HG]|PP}MAPP + + 62.151 27.396 4.6411 5.0178 5.0178 56.708 0.0 0.0 0.0 0.0 34.75538335112488 0.0 0.0 0 1.924742501084005 0.0 0.0 1.5303695511246984 {[HG]|PP}MAPPPPPPQN 5.0178 - 1223 + 1 2.397 53525.0 1.0 1283 3198 4482 DOHH2_400M_050219_1,4483 DOHH2_400M_050219_1,4483,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4484 23.414 292.0 243800.0 25 0 20023.0 -1 0 109 442.2651782684726 441.2579018018726 1 442.2647277712822 MULTI CID FTMS 0 0 0 4482 169835.703125 0.9894515102094024 1 -0.0101242065429687 2 1 {I|L} 1 -1 10.596 0.0 0.0 2.4013 0.0 0.0 310.16274601749603 0.0 310.16274601749603 0.0 4.90956968018592 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.4013 - 17 + 1 2.397 62143.9 1.0 1284 3198 4482 DOHH2_400M_050219_1,4484 DOHH2_400M_050219_1,4484, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4486 23.419 43.0 1585700.0 25 0 97134.0 + 6512 EAKQRLQQL 9 91 557.3223377455638 1112.6301225579275 2 557.3224365115166 MULTI CID FTMS 0 0 0 4485 1392538.125 0.7165969011570408 3 -0.1135005950927734 1 Unmodified _EAKQRLQQL_ ENSG00000196683|ENST00000358435|TOMM7;ENST00000463284.2_1_7:22852718-22862419:-|nuORF;ENST00000496129.1_1_7:22857608-22862419:-|nuORF 110.6747026088012 0.0053351249510064 1 [Q{I|L}]QSR{I|L}QQ{I|L} 9 4 + 60.584 0.0 0.0 5.4451 5.4451 85.394 0.0 0.0 0.0 7.147642715192497 19.61000953202324 7.147642715192497 9.208187539523742 0 1.110924374808178 0.0 2.239651828710444 0.0 [Q{I|L}]QSR{I|L}QQ{I|L};[Q{I|L}]QSR{I|L}Q[AG]{I|L};[Q{I|L}][AG]SR{I|L}QQ{I|L};[Q{I|L}]QSR{I|L}[AG]Q{I|L};[KA]EQR{I|L}QQ{I|L};[Q{I|L}]QSR{I|L}[AG][AG]{I|L};[Q{I|L}][AG]SR{I|L}[AG]Q{I|L};[Q{I|L}][AG]SR{I|L}Q[AG]{I|L};[VP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R{I|L}QQ{I|L};[KA]EQR{I|L}[AG]Q{I|L} 5.4451;4.6175;4.6175;4.6175;4.1136;3.7938;3.7938;3.7938;3.6997;3.286 -;-;-;-;-;-;-;-;-;- 584 1 2.397 56703.6 1.0 1285 3199 4485 DOHH2_400M_050219_1,4486 DOHH2_400M_050219_1,4486,EAKQRLQQL True True EAKQRLQQL 23.418509 557.322436511517 19606602.0 4485.0 ENST00000496129.1_1_7:22857608-22862419:-|nuORF;;ENSG00000196683|ENST00000358435|TOMM7;;ENST00000463284.2_1_7:22852718-22862419:-|nuORF 6.087565104166667 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4487 23.432 800.0 107660.0 25 0 7382.1 -1 0 64 870.4100602962394 4347.013919148197 5 871.0117065310478 MULTI CID FTMS 0 0 0 4485 88536.9140625 1.0 0 0.0 2 1 ASA 3 -1 13.971 0.0 0.0 0.32139 0.0 0.0 3820.773698056203 294.1100252740844 4114.883723330288 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 ASA 0.32139 - 73 + 1 2.397 66638.9 0.4000000059604645 1286 3199 4485 DOHH2_400M_050219_1,4487 DOHH2_400M_050219_1,4487, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4488 23.441 469.0 331290.0 25 0 23038.0 44012 YIFRIRKK 8 138 375.2409702228961 1122.7010812688884 3 375.2408630251884 MULTI CID FTMS 0 0 0 4485 101502.3828125 1.0 0 0.0 3 Unmodified _YIFRIRKK_ ENST00000591956.1_1_17:74557657-74557777:+|nuORF 14.838274106304384 0.6917062315640577 1 Y{I|L}{M(Oxidation (M))|F} 3 5 43.188 0.0 0.0 3.8468 0.0 0.0 0.0 696.4665819744512 696.4665819744512 22.21848749616356 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + Y{I|L}{M(Oxidation (M))|F} 3.8468 + + 35 + 1 2.397 126685.3 1.0 1287 3199 4485 DOHH2_400M_050219_1,4488 DOHH2_400M_050219_1,4488,YIFRIRKK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4489 23.449 484.0 119150.0 25 0 4637.9 + 6710 EDEDAYKKQF 10 96 424.8629433094829 0 424.8630248904228 PEAK CID FTMS 0 0 0 4485 83761.9921875 1.0 0 0.0 4 Unmodified _EDEDAYKKQF_ ENSG00000122406|ENST00000370321|RPL5;ENST00000434805.1_1_1:35816564-35817152:+|nuORF 49.93300154707207 0.0492411442460757 1 AY 2 8 10.969 0.0 0.0 1.294 0.0 0.0 64.28324190327119 546.3040230218343 610.5872649251055 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + AY 1.294 + + 50 + 1 2.397 55839.3 1.0 1288 3199 4485 DOHH2_400M_050219_1,4489 DOHH2_400M_050219_1,4489,EDEDAYKKQF True True EDEDAYKKQF 23.449198 424.863024890423 362962.84375 4485.0 ENST00000434805.1_1_1:35816564-35817152:+|nuORF;;ENSG00000122406|ENST00000370321|RPL5 6.590164661407471 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4490 23.463 800.0 201290.0 25 0 50831.0 217 AASRSTAA 8 70 734.3763933493633 733.3691168827633 1 734.3762084841728 MULTI CID FTMS 0 0 0 4485 152667.9375 0.5806454833459022 -5 0.1088085174560546 5 Unmodified _AASRSTAA_ ENSG00000177025|ENST00000314391|C19orf18 0.7936320650641473 0.8195151834710337 1 EP{I|L}T{M(Oxidation (M))|F}K 6 7 + 54.754 0.0 0.0 7.4661 7.4661 90.076 0.0 0.0 0.0 8.552659518797938 8.552659518797938 8.552659518797938 8.552659518797938 0 1.1989700043360187 1.3010299956639813 0.6109243748081782 0.0 EP{I|L}T{M(Oxidation (M))|F}K;[EP]{I|L}T{M(Oxidation (M))|F}Q;[TP]{I|L}E{M(Oxidation (M))|F}Q;[KT]{M(Oxidation (M))|F}[{I|L}P]E;[{M(Oxidation (M))|F}T]K[{I|L}P]E;[TP]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T[{I|L}P]E 7.4661;6.2999;2.064;0.55944;0.3854;0.25693;0.016818 -;-;-;-;-;-;- 138 + 1 2.397 117406.2 0.6299999952316284 1289 3199 4485 DOHH2_400M_050219_1,4490 DOHH2_400M_050219_1,4490,AASRSTAA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4493 23.472 131.0 469080.0 25 0 130530.0 + 30462 READQPLRTY 10 55 624.8201929173671 1247.625832901534 2 624.8200561404228 MULTI CID FTMS 0 0 0 4492 370619.4375 0.5217248429391093 5 -0.1808605194091797 1 Unmodified _READQPLRTY_ ENSG00000145041|ENST00000684031|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;nc|ENSG00000145041|Q9Y4B6-3|DCAF1 14.170726826480095 0.609770978780556 1 {[RE]|[WV]}WQ 4 7 25.049 0.0 0.0 2.0078 0.0 0.0 0.0 645.3403414361936 645.3403414361936 25.049406363485858 0.0 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 {[RE]|[WV]}WQ 2.0078 - 9 + 1 2.385 49828.4 1.0 1290 3201 4492 DOHH2_400M_050219_1,4493 DOHH2_400M_050219_1,4493,READQPLRTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4494 23.486 800.0 208640.0 25 0 16488.0 + 8717 EVLKKVKTL 9 175 529.352933392875 1056.69131385255 2 529.3533203005791 MULTI CID FTMS 0 0 0 4492 130413.8359375 0.8574290684625402 1 -0.060373306274414 2 Unmodified _EVLKKVKTL_ ENSG00000115685|ENST00000234038|PPP1R7;nc|ENSG00000115685|Q15435-2|PPP1R7;nc|ENSG00000115685|Q15435-3|PPP1R7;nc|ENSG00000115685|Q15435-4|PPP1R7;nc|ENSG00000115685|Q15435-5|PPP1R7 100.7086487251713 0.0106210784076588 1 {I|L}D{I|L}KKVKT{I|L} 9 2 + 102.68 0.0 0.0 9.7169 9.7169 97.76 0.0 0.0 0.0 83.99373136495635 21.08327228896921 21.08327228896921 21.04229890974922 0 2.3169015600442577 2.0 1.0994850021680094 0.2887254899964357 {I|L}D{I|L}KKVKT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}KKVKT{I|L};[{I|L}T]ARRVKT{I|L};KKV{I|L}EVKT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}EVKT{I|L};[KG][VG]KKVKT{I|L};[K{I|L}]KVEVKT{I|L};KK{I|L}VEVKT{I|L};[K{I|L}][RV]TVKT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[R{I|L}]TVKT{I|L} 9.7169;7.7256;5.1456;4.9676;4.9192;4.3782;4.3061;4.1129;3.5045;3.2629 -;+;-;-;-;-;-;-;-;- + 553 + 1 2.385 126748.4 0.7900000214576721 1291 3201 4492 DOHH2_400M_050219_1,4494 DOHH2_400M_050219_1,4494,EVLKKVKTL True True EVLKKVKTL 23.485908 529.353320300579 537481.8125 4492.0 ENSG00000115685|ENST00000234038|PPP1R7;;nc|ENSG00000115685|Q15435-4|PPP1R7;;nc|ENSG00000115685|Q15435-3|PPP1R7;;nc|ENSG00000115685|Q15435-5|PPP1R7;;nc|ENSG00000115685|Q15435-2|PPP1R7 6.837580839792888 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4495 23.5 800.0 218950.0 25 0 10147.0 + 7057 EELGNHKAF 9 166 522.7599586481672 1043.5053643631345 2 522.7598754763603 MULTI CID FTMS 0 0 0 4492 144220.484375 0.591464191407045 -2 0.0531272888183593 3 Unmodified _EELGNHKAF_ ENSG00000173786|ENST00000393892|CNP;nc|ENSG00000173786|P09543-2|CNP 74.92900055777586 0.0191935851694334 1 EE{I|L}GNHKA{M(Oxidation (M))|F} 9 0 + 63.567 0.0 0.0 6.0916 6.0916 88.359 0.0 0.0 0.0 35.68986197282592 16.478174818886373 16.478174818886373 9.208187539523747 0 1.1989700043360187 1.5228787452803376 0.0 0.3494850021680094 + + EE{I|L}GNHKA{M(Oxidation (M))|F};EE{I|L}GGGHKA{M(Oxidation (M))|F};EE{I|L}GN{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}P;EE[YT]RH[{I|L}P];EE[YT]RH{I|L}P;EE[HV]K{[QG]|[NA]}A{M(Oxidation (M))|F};EE[HV]{[QG]|[NA]}KA{M(Oxidation (M))|F};EE{I|L}QQ{[MG]|[TS]}{I|L}P;EE{I|L}G[QA]{[MG]|[TS]}{I|L}P;EE[HV]KQQ{M(Oxidation (M))|F} 6.0916;5.2092;4.2225;3.9525;3.8101;3.5026;3.5026;3.4768;3.433;3.2926 +;-;-;-;-;-;-;-;-;- + 1091 + 1 2.385 140977.0 0.7599999904632568 1292 3201 4492 DOHH2_400M_050219_1,4495 DOHH2_400M_050219_1,4495,EELGNHKAF True True EELGNHKAF 23.49975 522.75987547636 1043956.375 4492.0 nc|ENSG00000173786|P09543-2|CNP;;ENSG00000173786|ENST00000393892|CNP 4.531033277511597 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4496 23.514 800.0 332270.0 25 0 27422.0 + 6975 EEIKKETGF 9 188 540.782240783948 1079.549928634696 2 540.7821533083916 MULTI CID FTMS 0 0 0 4492 119334.0546875 0.0976081516662009 -4 0.0695877075195312 4 Unmodified _EEIKKETGF_ ENSG00000187446|ENST00000334660|CHP1 173.68634876852585 1.0092458980979228e-06 1 EE{I|L}KKETG{M(Oxidation (M))|F} 9 0 + 112.17 0.0 0.0 10.391 10.391 98.641 0.0 0.0 0.0 60.80320662047981 14.973024840566469 14.973024840566469 27.21746006323471 0 2.3358317385287872 1.6989700043360187 1.6989700043360187 0.3054621874040891 + + EE{I|L}KKETG{M(Oxidation (M))|F};EE{I|L}KKE{M(Oxidation (M))|F}{[SA]|[TG]};EE{I|L}KKEAAY;EE{I|L}KK{[CA]|SS}PY;EE{I|L}KK{[CA]|SS}{M(Oxidation (M))|F}{I|L};EE{I|L}K{[QV]|[N{I|L}]|[RA]|[KV]}[TA]Y;EE{I|L}KK{[CA]|SS}YP;EE{I|L}KK{[WT]|[RM]}{M(Oxidation (M))|F};EE{I|L}KK{[SA]|[TG]}E{M(Oxidation (M))|F};{[ET]|[MV]}KKG{[NV]|[RG]}TG{M(Oxidation (M))|F} 10.391;7.8696;7.7043;6.4542;6.2343;6.0341;5.8615;5.1107;5.0633;4.5771 +;-;-;-;-;-;-;-;-;- + 8062 + 1 2.385 201878.7 0.7300000190734863 1293 3201 4492 DOHH2_400M_050219_1,4496 DOHH2_400M_050219_1,4496,EEIKKETGF True True EEIKKETGF 23.513581 540.782153308392 12014362.0 4492.0 ENSG00000187446|ENST00000334660|CHP1 7.780224005381267 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4497 23.527 800.0 229490.0 25 0 22759.0 + 9437 FLARKPSAV 9 160 494.8005595335913 987.5865661339826 2 494.8005859255791 MULTI CID FTMS 0 0 0 4492 101712.4296875 0.492060328681953 -2 0.0531272888183593 5 Unmodified _FLARKPSAV_ ENST00000312037.5_1_5:149826506-149829126:-|nuORF;ENST00000407193.5_1_5:149826506-149829126:-|nuORF 72.96794272382148 0.0199516581995792 1 {M(Oxidation (M))|F}{I|L}ARKPSAV 9 0 + 47.405 0.0 0.0 4.8001 4.8001 85.406 0.0 0.0 0.0 18.176966438211004 7.252684618815088 7.252684618815088 11.478396386399396 0 1.8711375162600703 0.0 0.3807196863200844 0.3494850021680094 + + {M(Oxidation (M))|F}{I|L}ARKPSAV;{M(Oxidation (M))|F}{I|L}ARKPSG{I|L};{M(Oxidation (M))|F}{I|L}ARK{[TV]|[{I|L}S]}GP;{NN|[MP]|[D{I|L}]|[EV]}VV{I|L}A{I|L}{M(Oxidation (M))|F}V;[PA]S[RK]A{I|L}{M(Oxidation (M))|F}V;{M(Oxidation (M))|F}{I|L}ARK[VS]AP;[PS]A[RK]A{I|L}{M(Oxidation (M))|F}V;{[CP]|[EA]}{I|L}{I|L}{I|L}A{I|L}{M(Oxidation (M))|F}V;[PG]T[RK]A{I|L}{M(Oxidation (M))|F}V;{[SA]|[TG]}P[RK]A{I|L}{M(Oxidation (M))|F}V 4.8001;3.6379;2.9545;2.6427;2.3981;2.2049;2.0889;1.9702;1.5638;1.5353 +;-;-;-;-;-;-;-;-;- + 475 + 1 2.385 143814.8 0.6600000262260437 1294 3201 4492 DOHH2_400M_050219_1,4497 DOHH2_400M_050219_1,4497,FLARKPSAV True True FLARKPSAV 23.527396 494.800585925579 862898.1875 4492.0 ENST00000407193.5_1_5:149826506-149829126:-|nuORF;;ENST00000312037.5_1_5:149826506-149829126:-|nuORF 6.282199700673421 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4499 23.544 722.0 94865.0 25 0 8932.7 + 23136 LSPSFPLSL 9 114 480.7719618516649 959.5293707701298 2 480.7722045779228 MULTI CID FTMS 0 0 0 4498 61335.3515625 0.6436683329290042 1 -0.0241508483886718 1 Unmodified _LSPSFPLSL_ REV__ENST00000269967.3_1_19:41828671-41829175:+|nuORF 20.453626601364224 0.2830276176381075 1 MS{I|L} 3 -1 19.274 0.0 0.0 2.0087 0.0 0.0 610.3674577836049 0.0 610.3674577836049 0.0 9.670239714175205 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 MS{I|L} 2.0087 - 70 + 1 2.373 59422.4 1.0 1295 3202 4498 DOHH2_400M_050219_1,4499 DOHH2_400M_050219_1,4499,LSPSFPLSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4500 23.545 26.0 2603300.0 25 0 207280.0 + 29116 QERPSVTSY 9 110 533.7613583824993 1065.5081638317986 2 533.7617675662041 MULTI CID FTMS 0 0 0 4498 2039886.25 0.7547551765124851 -2 0.064340591430664 2 Unmodified _QERPSVTSY_ ENSG00000196510|ENST00000455511|ANAPC7;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 53.832793166522166 0.0319663582346103 1 [HM]TV[YR]PY 8 8 + 57.145 0.0 0.0 5.3632 5.3632 81.206 0.0 0.0 0.0 42.22332374560656 0.2237030067185941 0.2237030067185941 5.268024924119672 0 1.0 0.0 0.3807196863200844 1.0941876774005248 [HM]TV[YR]PY;[HM]TY[RV]PY;[HM]TV[KC][KG]Y;[TP]SE{[QV]|[N{I|L}]|[RA]|[KV]}RSY;{[RE]|[WV]}[C(Carbamidomethyl (C))S][RV]PY;[R{M(Oxidation (M))|F}][DN][RV]PY;[TP]SE{[RE]|[WV]}[KG]Y;[HM]E[HD]KKAA;[HM]E[VP][H{I|L}]{[CT]|[{M(Oxidation (M))|F}G]} 5.3632;4.8687;3.9833;3.189;1.4302;1.2063;0.89717;0.37628;0.16226 -;-;-;-;-;-;-;-;- 270 + 1 2.373 60123.7 1.0 1296 3202 4498 DOHH2_400M_050219_1,4500 DOHH2_400M_050219_1,4500,QERPSVTSY True True QERPSVTSY 23.544783 533.761767566204 14270360.0 4498.0 nc|ENSG00000196510|Q9UJX3-2|ANAPC7;;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;;ENSG00000196510|ENST00000455511|ANAPC7 6.147289276123047 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4501 23.552 378.0 161960.0 25 0 32800.0 + 30464 READQPLRTY 10 71 416.8824115754461 1247.6254053265384 3 416.8822204470634 MULTI CID FTMS 0 0 0 4498 104077.9296875 0.1447208175713867 6 -0.1414470672607422 3 Unmodified _READQPLRTY_ ENSG00000145041|ENST00000684031|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;nc|ENSG00000145041|Q9Y4B6-3|DCAF1 13.534932898082838 0.6204389833734957 1 {[RE]|[WV]}ADQ 5 5 28.64 0.0 0.0 2.2956 0.0 0.0 0.0 645.3344013744361 645.3344013744361 13.15552802072581 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 + {[RE]|[WV]}ADQ 2.2956 + + 47 1 2.373 58135.1 1.0 1297 3202 4498 DOHH2_400M_050219_1,4501 DOHH2_400M_050219_1,4501,READQPLRTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4503 23.564 558.0 341280.0 25 0 26510.0 + 9590 FLKQRPTKL 9 170 377.5727792479877 1129.696508344163 3 377.5727111697197 MULTI CID FTMS 0 0 0 4502 93563.625 0.7768041393251783 -1 0.0241508483886718 1 Unmodified _FLKQRPTKL_ ENSG00000089127|ENST00000202917|OAS1;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1 53.31671820480216 0.0330978755772958 1 {M(Oxidation (M))|F}{I|L}KQR[TP]K{I|L} 9 0 + 44.509 0.0 0.0 3.9399 3.9399 71.792 0.0 0.0 0.0 27.60299258132939 3.2091142385693416 3.2091142385693416 1.4979721125219214 0 0.6747425010840047 0.0 0.2742275032520141 1.110924374808178 + + {M(Oxidation (M))|F}{I|L}KQR[TP]K{I|L};{M(Oxidation (M))|F}{I|L}{I|L}K[NG][TP]K{I|L};{M(Oxidation (M))|F}{I|L}K{I|L}[NG][TP]K{I|L};{I|L}{M(Oxidation (M))|F}KQR[TP]K{I|L};{I|L}{M(Oxidation (M))|F}{I|L}K[NG][TP]K{I|L};{I|L}{M(Oxidation (M))|F}K{I|L}[NG][TP]K{I|L};{M(Oxidation (M))|F}{I|L}K{I|L}[{I|L}A]ANK{I|L};{M(Oxidation (M))|F}{I|L}{I|L}[W{I|L}][TP]K{I|L};{M(Oxidation (M))|F}{I|L}{I|L}RR{[QG]|[NA]}K{I|L};{M(Oxidation (M))|F}{I|L}KQ[VG][TP]K{I|L} 3.9399;3.8073;3.678;3.6068;3.4742;3.3449;3.2897;3.2088;3.1688;3.1248 +;-;-;-;-;-;-;-;-;- + 324 + 1 2.373 149817.7 1.0 1298 3203 4502 DOHH2_400M_050219_1,4503 DOHH2_400M_050219_1,4503,FLKQRPTKL True True FLKQRPTKL 23.563712 377.57271116972 544612.0625 4502.0 ENSG00000089127|ENST00000202917|OAS1;;nc|ENSG00000089127|P00973-2|OAS1;;nc|ENSG00000089127|P00973-3|OAS1;;nc|ENSG00000089127|P00973-4|OAS1 2.6069769859313965 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4504 23.569 259.0 437600.0 25 0 83889.0 + 29373 QKSSLIEEF 9 119 360.8575122621859 1079.5507073867575 3 360.8569213747978 MULTI CID FTMS 0 0 0 4502 183856.625 0.4228722276424213 -2 0.0845241546630859 2 Unmodified _QKSSLIEEF_ ENSG00000187527|ENST00000342358|ATP13A5 10.823927491677226 0.5436922275383211 1 [DP][R{I|L}]KGT{M(Oxidation (M))|F}{M(Oxidation (M))|F} 9 8 [DP][R{I|L}]KGT{M(Oxidation (M))|F} + + 15.485 6.3921 0.69899 1.4344 1.4344 48.489 0.0 0.0 0.0 0.0 -7.971062485323515 -7.971062485323515 0.0 0 0.0 0.0 0.0 0.0 [DP][R{I|L}]KGT{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.4344 - 207 + 1 2.373 93765.3 1.0 1299 3203 4502 DOHH2_400M_050219_1,4504 DOHH2_400M_050219_1,4504,QKSSLIEEF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4505 23.582 800.0 203430.0 25 0 18456.0 + 5138 DIIERHNTM 9 177 564.7766793934832 1127.5388058537662 2 564.7761718630791 MULTI CID FTMS 0 0 0 4502 119872.453125 0.398738904251358 -3 0.0884914398193359 3 Unmodified _DIIERHNTM_ ENSG00000137936|ENST00000260502|BCAR3;nc|ENSG00000137936|O75815-2|BCAR3;nc|ENSG00000137936|O75815-3|BCAR3 81.9152076656658 0.0170527153246128 1 D{I|L}{I|L}ERHNTM 9 0 + 93.257 0.0 0.0 8.2709 8.2709 97.365 0.0 0.0 0.0 54.76963452756024 17.45532533079654 17.45532533079654 27.859634694666653 0 2.417735320183944 2.0 1.092265970233952 1.086696871556164 + + D{I|L}{I|L}ERHNTM;{NN|[MP]|[D{I|L}]|[EV]}{I|L}ERHNTM;D{I|L}{I|L}E{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}ERHGGTM;D{I|L}{I|L}{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}T{[QN]|[E{I|L}]|[KN]};MP{I|L}E{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{[QN]|[E{I|L}]|[KN]};D{I|L}{I|L}{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}[KQ]S;D{I|L}{I|L}{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}[VP];MP{I|L}{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}T{[QN]|[E{I|L}]|[KN]};MP{I|L}{M(Oxidation (M))|F}[YT][RN]S 8.2709;5.8;5.3253;4.9834;4.2662;4.1511;4.1449;3.4139;3.0921;3.0675 +;+;-;-;-;-;-;-;-;- + 932 + 1 2.373 123703.6 0.5600000023841858 1300 3203 4502 DOHH2_400M_050219_1,4505 DOHH2_400M_050219_1,4505,DIIERHNTM True True DIIERHNTM 23.582339 564.776171863079 1994077.0 4502.0 nc|ENSG00000137936|O75815-2|BCAR3;;ENSG00000137936|ENST00000260502|BCAR3;;nc|ENSG00000137936|O75815-3|BCAR3 6.247708956400554 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4507 23.597 710.0 180450.0 25 0 17673.0 + 29019 QEDRPGLHAY 10 160 395.8596983230945 0 395.8590576052666 PEAK CID FTMS 0 0 0 4506 61894.046875 0.0370236005534932 13 -0.2847194671630859 1 Unmodified _QEDRPGLHAY_ ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1 23.78978130925829 0.2677467798970439 1 E 1 9 6.2814 0.0 0.0 0.79542 0.0 0.0 122.37752545302642 535.2627650401455 657.640290493172 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + E 0.79542 + + 56 + 1 2.373 103950.0 1.0 1301 3204 4506 DOHH2_400M_050219_1,4507 DOHH2_400M_050219_1,4507,QEDRPGLHAY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4508 23.602 257.0 436600.0 25 0 35489.0 + 5139 DIIERHNTM 9 127 376.85414775199456 1127.5406138561837 3 376.8534423708916 MULTI CID FTMS 0 0 0 4506 132868.90625 0.4677658568291391 -2 0.054931640625 2 Unmodified _DIIERHNTM_ ENSG00000137936|ENST00000260502|BCAR3;nc|ENSG00000137936|O75815-2|BCAR3;nc|ENSG00000137936|O75815-3|BCAR3 29.081581746732265 0.1611639662936252 1 {NN|[MP]|[D{I|L}]|[EV]}{[HG]|PP}{I|L}NT 7 5 28.103 0.0 0.0 2.4924 0.0 0.0 0.0 374.1409194745687 374.1409194745687 14.60805205660652 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[HG]|PP}{I|L}NT 2.4924 - 223 1 2.373 93045.5 1.0 1302 3204 4506 DOHH2_400M_050219_1,4508 DOHH2_400M_050219_1,4508,DIIERHNTM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4509 23.608 332.0 259620.0 25 0 71902.0 12462 GVAELKHW 8 106 470.2557939230291 938.4970349128582 2 470.2570678591728 MULTI CID FTMS 0 0 0 4506 117824.671875 0.5075534868418573 7 -0.1268520355224609 3 Unmodified _GVAELKHW_ ENSG00000162852|ENST00000366513|CNST 5.230669730166228 0.792582437072536 1 {I|L} 1 7 10.089 0.0 0.0 1.075 0.0 0.0 807.4019249048489 0.0 807.4019249048489 0.0 3.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.075 + + 35 + 1 2.373 69814.0 1.0 1303 3204 4506 DOHH2_400M_050219_1,4509 DOHH2_400M_050219_1,4509,GVAELKHW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4510 23.612 230.0 245850.0 25 0 18736.0 + 23910 LVNDPTPQ 8 104 442.22802345797874 0 442.2278320193291 PEAK CID FTMS 0 0 0 4506 102441.9609375 0.808909348726782 1 -0.0436553955078125 4 Unmodified _LVNDPTPQ_ REV__ENSG00000181433|ENST00000370709|SAGE1 10.823927491677226 0.5322985476678564 1 Y 1 -1 5.0886 0.0 0.0 0.57666 0.0 0.0 441.2599597708592 275.1037996881469 716.3637594590061 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 Y 0.57666 - 15 + 1 2.373 47517.9 1.0 1304 3204 4506 DOHH2_400M_050219_1,4510 DOHH2_400M_050219_1,4510,LVNDPTPQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4511 23.626 800.0 75082.0 25 0 4055.1 -1 0 48 922.2286337440848 0 922.4313232302666 PEAK CID FTMS 0 0 0 4506 54279.5390625 0.8101416183380425 -1 0.0307807922363281 5 1 A 1 -1 6.9897 0.0 0.0 0.37937 0.0 0.0 1196.1826570371943 572.1999151134328 1768.382572150627 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.37937 - 3 + 1 2.373 48279.8 0.4600000083446502 1305 3204 4506 DOHH2_400M_050219_1,4511 DOHH2_400M_050219_1,4511, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4513 23.636 347.0 284030.0 25 0 54634.0 + 5298 DLCVRGLR 8 91 466.2597799200801 930.5050069069604 2 466.2598144412041 MULTI CID FTMS 0 0 0 4512 195892.0 0.9227368431434186 -4 0.1589603424072265 1 Unmodified _DLCVRGLR_ REV__ENSG00000100075|ENST00000215882|SLC25A1 18.13498045792455 0.6430038125133779 1 VE 2 -1 42.391 0.0 0.0 4.5557 0.0 0.0 0.0 699.3725057788073 699.3725057788073 21.42159058960253 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 VE 4.5557 - 75 + 1 2.365 80185.7 1.0 1306 3205 4512 DOHH2_400M_050219_1,4513 DOHH2_400M_050219_1,4513,DLCVRGLR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4514 23.638 115.0 421880.0 25 0 38900.0 + 11105 GEFQTQHSY 9 94 548.7386720863075 1095.4627912394149 2 548.7391845583916 MULTI CID FTMS 0 0 0 4512 288417.75 0.770678863432199 -1 0.0436553955078125 2 Unmodified _GEFQTQHSY_ ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11 47.74868867922204 0.0453060283459952 1 {[DA]|[EG]}{M(Oxidation (M))|F}Q[QT]HSY 9 0 + 58.439 0.0 0.0 5.3346 5.3346 85.484 0.0 0.0 0.0 57.32956253501804 11.478174818886371 11.478174818886371 9.208187539523747 0 0.805462187404089 1.6989700043360187 0.7302046884880937 0.5 + + {[DA]|[EG]}{M(Oxidation (M))|F}Q[QT]HSY;{[DA]|[EG]}{M(Oxidation (M))|F}[AG][QT]HSY;{[DA]|[EG]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]SY 5.3346;4.494;2.4842 +;-;- + 114 + 1 2.365 44722.8 1.0 1307 3205 4512 DOHH2_400M_050219_1,4514 DOHH2_400M_050219_1,4514,GEFQTQHSY True True GEFQTQHSY 23.638347 548.739184558392 1585034.125 4512.0 ENSG00000104133|ENST00000261866|SPG11;;nc|ENSG00000104133|Q96JI7-3|SPG11;;nc|ENSG00000104133|Q96JI7-2|SPG11 8.401512940724691 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4515 23.644 290.0 353790.0 25 0 40216.0 + 31819 RTAIHEVM 8 104 478.75295535779895 955.491357782398 2 478.7524597048759 MULTI CID FTMS 0 0 0 4512 142353.984375 0.4943894360425989 -4 0.1589603424072265 3 Unmodified _RTAIHEVM_ ENSG00000112118|ENST00000596288|MCM3;ENSG00000166508|ENST00000303887|MCM7;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;nc|ENSG00000112118|P25205-2|MCM3;nc|ENSG00000166508|P33993-3|MCM7 17.11289562659939 0.6581031263288403 1 {M(Oxidation (M))|F}HEVM 5 4 39.609 0.0 0.0 4.1454 0.0 0.0 294.1943592264637 0.0 294.1943592264637 0.0 26.42159058960253 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {M(Oxidation (M))|F}HEVM 4.1454 - 164 1 2.365 80693.6 1.0 1308 3205 4512 DOHH2_400M_050219_1,4515 DOHH2_400M_050219_1,4515,RTAIHEVM False True RTAIHEVM 23.643661 478.752459704876 1272859.625 4512.0 nc|ENSG00000166508|P33993-3|MCM7;;ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3;;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;;ENSG00000166508|ENST00000303887|MCM7 3.949293295542399 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4516 23.648 220.0 324330.0 25 0 28233.0 + 14092 IAPTGHSL 8 118 398.2213859156115 794.428218898023 2 398.2210876345634 MULTI CID FTMS 0 0 0 4512 219889.0625 0.7348937861267903 2 -0.0259037017822265 4 Unmodified _IAPTGHSL_ ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11 38.15118350030904 0.2652218139009398 1 [{I|L}A]PTGHS{I|L} 8 0 + 42.167 0.0 0.0 5.3079 5.3079 83.52 0.0 0.0 0.0 28.25388845183398 1.699828503311778 1.699828503311778 8.422684792966287 0 0.4247425010840047 2.0 0.6861818737241735 0.0 + + [{I|L}A]PTGHS{I|L};[{I|L}A]{[NV]|[RG]}{[YC]|[HE]}{I|L};{[HG]|PP}TPS{I|L}A{I|L};{[HG]|PP}S[TP]{I|L}A{I|L};{[HG]|PP}E[VG]{I|L}A{I|L} 5.3079;4.2476;1.7631;0.28272;0.061062 +;-;-;-;- + 87 + 1 2.365 58603.6 1.0 1309 3205 4512 DOHH2_400M_050219_1,4516 DOHH2_400M_050219_1,4516,IAPTGHSL False True IAPTGHSL 23.647807 398.221087634563 1314710.5 4512.0 nc|ENSG00000125354|Q14141-4|SEPTIN6;;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;;nc|ENSG00000125354|Q14141|SEPTIN6;;ENSG00000125354|ENST00000394610|SEPTIN6;;nc|ENSG00000125354|Q14141-3|SEPTIN6;;ENSG00000138758|ENST00000264893|SEPTIN11 5.188042004903157 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4519 23.661 395.0 168970.0 25 0 25561.0 + 18989 LDGLRDASLW 10 87 573.2987539941354 1144.582955055071 2 573.2993041872978 MULTI CID FTMS 0 0 0 4518 84183.7890625 0.8146861207005853 1 -0.0169563293457031 1 Unmodified _LDGLRDASLW_ REV__ENSG00000221829|ENST00000378643|FANCG;REV__ENST00000461149.1_1_9:35078119-35078602:-|nuORF 9.38312468134398 0.6832340498775793 1 Y 1 -1 12.218 0.0 0.0 1.0675 0.0 0.0 963.5087801056552 0.0 963.5087801056552 0.0 0.4357508785945008 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0675 - 21 + 1 2.365 56379.7 1.0 1310 3207 4518 DOHH2_400M_050219_1,4519 DOHH2_400M_050219_1,4519,LDGLRDASLW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4520 23.669 416.0 242040.0 25 0 27970.0 + 6032 DSDRGLQEGY 10 117 570.251390469724 1138.488228006248 2 570.2516357302666 MULTI CID FTMS 0 0 0 4518 112107.2578125 0.2502597518562299 -7 0.1888313293457031 2 Unmodified _DSDRGLQEGY_ ENSG00000175931|ENST00000319380|UBE2O 32.037481411007896 0.2488723560272515 1 G{I|L}QEGY 6 4 55.75 0.0 0.0 4.8969 0.0 0.0 473.1879444806656 0.0 473.1879444806656 0.0 28.48258770979733 0.0 0.0 0 1.0 0.0 0.0 0.7614393726401688 + G{I|L}QEGY 4.8969 + + 3238 1 2.365 78429.5 1.0 1311 3207 4518 DOHH2_400M_050219_1,4520 DOHH2_400M_050219_1,4520,DSDRGLQEGY False True DSDRGLQEGY 23.668759 570.251635730267 2038380.0 4518.0 ENSG00000175931|ENST00000319380|UBE2O 6.195918877919515 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4522 23.673 97.0 581760.0 25 0 38354.0 + + 10643 MPPAPPPPPPQN 12 75 620.3130774713335 1238.6116020094669 2 620.3132812380791 MULTI CID FTMS 0 0 0 4521 491426.21875 0.8614132980156364 -12 0.3149013519287109 1 Unmodified _FVQLCPYKGQG_ ENST00000413725.5_1_11:64533292-64535069:-|nuORF;ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-7|SF1 21.53697664764585 0.586507868110548 1 {[HG]|PP}MAPPPPPPQN 12 -1 {[HG]|PP}MA + + 78.872 8.6721 2.1889 6.3678 6.3678 61.551 0.0 0.0 0.0 0.0 61.872512404739965 0.0 0.0 0 2.7302046884880937 0.0 0.0 1.6936726795685342 {[HG]|PP}MAPPPPPPQN 6.3678 - 1777 + 1 2.365 48896.0 1.0 1312 3208 4521 DOHH2_400M_050219_1,4522 DOHH2_400M_050219_1,4522,FVQLCPYKGQG False False MPPAPPPPPPQN 23.673457 620.313281238079 212517020.0 4521.0 ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;ENSG00000168066|ENST00000377390|SF1;;nc|ENSG00000168066|Q15637-7|SF1 6.048673152923584 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4523 23.678 249.0 401900.0 25 0 39895.0 1057 AGGKPITM 8 118 387.712284912076 0 387.7126647830009 PEAK CID FTMS 0 0 0 4521 139910.40625 0.4635161412086842 -7 0.2018203735351562 2 Unmodified _AGGKPITM_ ENSG00000114982|ENST00000431828|KANSL3;ENST00000487070.5_1_2:97267510-97285240:-|nuORF;ENST00000597150.5_1_2:97261350-97297069:-|nuORF;nc|ENSG00000114982|Q9P2N6-2|KANSL3;nc|ENSG00000114982|Q9P2N6-4|KANSL3;nc|ENSG00000114982|Q9P2N6|KANSL3 18.13498045792455 0.4501116112875982 1 T 1 7 9.732 0.0 0.0 1.2583 0.0 0.0 523.3108785626301 146.02854334049064 669.3394219031208 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + T 1.2583 + + 12 + 1 2.365 80494.6 1.0 1313 3208 4521 DOHH2_400M_050219_1,4523 DOHH2_400M_050219_1,4523,AGGKPITM False True GKPVAATM 23.678445 387.712664783001 1963515.5 4521.0 ENSG00000145692|ENST00000274353|BHMT 2.635713974634806 2.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4524 23.688 527.0 164200.0 25 0 42134.0 34417 SLVPGIQPP 9 107 454.2645278522049 0 454.2647582888603 PEAK CID FTMS 0 0 0 4521 109378.0859375 0.2871429191405382 7 -0.1385364532470703 3 Unmodified _SLVPGIQPP_ ENSG00000118900|ENST00000262376|UBN1;nc|ENSG00000118900|Q9NPG3-2|UBN1 7.289230182591677 0.3433663536648894 1 H 1 9 6.9897 0.0 0.0 0.77105 0.0 0.0 98.0557705821994 668.3731173150999 766.4288878972993 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.77105 - 8 + 1 2.365 74403.2 1.0 1314 3208 4521 DOHH2_400M_050219_1,4524 DOHH2_400M_050219_1,4524,SLVPGIQPP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4527 23.696 86.0 626430.0 25 0 62345.0 + 1423 ALDPGTRDSY 10 89 547.759366081488 1093.504179229776 2 547.7593871951103 MULTI CID FTMS 0 0 0 4526 347869.4375 0.7665664004001744 -3 0.0397682189941406 1 Unmodified _ALDPGTRDSY_ ENSG00000119403|ENST00000373896|PHF19;nc|ENSG00000119403|Q5T6S3-2|PHF19;nc|ENSG00000119403|Q5T6S3-3|PHF19 20.41453444215458 0.5050059513928961 1 [{I|L}A]D{M(Oxidation (M))|F}TS 6 5 44.614 0.0 0.0 4.0799 0.0 0.0 0.0 456.2094764312009 456.2094764312009 31.45365019512084 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 [{I|L}A]D{M(Oxidation (M))|F}TS 4.0799 - 200 1 2.365 48138.2 1.0 1315 3210 4526 DOHH2_400M_050219_1,4527 DOHH2_400M_050219_1,4527,ALDPGTRDSY False True ALDPGTRDSY 23.696269 547.75938719511 2641728.75 4526.0 nc|ENSG00000119403|Q5T6S3-3|PHF19;;ENSG00000119403|ENST00000373896|PHF19;;nc|ENSG00000119403|Q5T6S3-2|PHF19 3.364744583765665 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4528 23.703 386.0 285600.0 25 0 30562.0 + 45445 YTDVSTRY 8 140 502.7378876762718 1003.4612224193436 2 502.7382079958916 MULTI CID FTMS 0 0 0 4526 111961.1484375 0.015430859671374 20 -0.7079505920410156 2 Unmodified _YTDVSTRY_ ENSG00000213593|ENST00000278422|TMX2;ENST00000436507.2_1_9:37885847-37886384:+|nuORF;nc|ENSG00000213593|Q9Y320-2|TMX2 32.78568957990786 0.3549862272178655 1 YTDV 4 4 53.602 0.0 0.0 5.3417 0.0 0.0 0.0 522.2323941645585 522.2323941645585 41.12781577388333 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.0 0.0 + YTDV 5.3417 + + 308 + 1 2.365 89272.6 1.0 1316 3210 4526 DOHH2_400M_050219_1,4528 DOHH2_400M_050219_1,4528,YTDVSTRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4529 23.709 324.0 300710.0 25 0 33513.0 -1 AESVPAHPC 9 104 484.218705085484 966.422857237768 2 484.2188293337822 MULTI CID FTMS 0 0 0 4526 114779.7578125 0.3088420492445085 -5 0.0656719207763671 3 Carbamidomethyl (C) _AESVPAHPC(Carbamidomethyl (C))_ ENSG00000134909|ENST00000682385|ARHGAP32;nc|ENSG00000134909|A7KAX9-2|ARHGAP32;nc|ENSG00000134909|A7KAX9|ARHGAP32 28.486842064014134 0.1687311288560894 1 {[CP]|[EA]}SPV 5 -1 32.135 0.0 0.0 3.3251 0.0 0.0 0.0 480.172140252068 480.172140252068 14.176127934005436 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 {[CP]|[EA]}SPV 3.3251 - 121 + 1 2.365 78652.5 1.0 1317 3210 4526 DOHH2_400M_050219_1,4529 DOHH2_400M_050219_1,4529,AESVPAHPC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4531 23.727 800.0 112750.0 25 0 6470.1 -1 ENHNIEKCSE 10 138 630.2680903432125 1258.521627753225 2 630.2685424685478 MULTI CID FTMS 0 0 0 4530 121210.484375 0.705262399959416 -5 0.0612964630126953 1 Carbamidomethyl (C) _ENHNIEKC(Carbamidomethyl (C))SE_ ENSG00000180479|ENST00000451802|ZNF571 18.373094154950223 0.5392593366289069 1 [AG]DAHEAQENA{M(Oxidation (M))|F} 12 -1 + 86.778 0.0 0.0 6.8952 6.8952 81.51 0.0 0.0 0.0 1.4266750356873104 16.611814434466197 1.4266750356873104 1.4266750356873104 0 0.5 1.2218487496163564 1.3001648626366045 0.3807196863200844 [AG]DAHEAQENA{M(Oxidation (M))|F};{[DA]|[EG]}GAHEAQENA{M(Oxidation (M))|F};{[QG]|[NA]}EHEAQENA{M(Oxidation (M))|F};[AG]DAHEAEQNA{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQENA{M(Oxidation (M))|F};{[DA]|[EG]}GAHEAEQNA{M(Oxidation (M))|F};[AG]AHDEAQENA{M(Oxidation (M))|F};{[QG]|[NA]}EHEAEQNA{M(Oxidation (M))|F};[AG]DAHEAQQDA{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAEQNA{M(Oxidation (M))|F} 6.8952;6.7818;6.6765;6.656;6.5724;6.5427;6.5066;6.4373;6.3398;6.3332 -;-;-;-;-;-;-;-;-;- 3863 1 2.362 69854.9 0.6100000143051147 1318 3211 4530 DOHH2_400M_050219_1,4531 DOHH2_400M_050219_1,4531,ENHNIEKCSE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4532 23.729 120.0 426560.0 25 0 84664.0 + 7287 EEVEAKFKRY 10 69 433.5632669126776 1297.6679713382327 3 433.5629150271416 MULTI CID FTMS 0 0 0 4530 158175.640625 0.9232651159744958 2 -0.04364013671875 2 Unmodified _EEVEAKFKRY_ ENSG00000106554|ENST00000262570|CHCHD3 16.149105407346934 0.5765757077271437 1 KAEV[HC] 6 9 30.406 0.0 0.0 2.3431 0.0 0.0 612.3382886928331 0.0 612.3382886928331 0.0 27.931825014007217 0.0 0.0 0 0.0 0.0 0.5 0.0 KAEV[HC] 2.3431 - 34 1 2.362 49141.0 1.0 1319 3211 4530 DOHH2_400M_050219_1,4532 DOHH2_400M_050219_1,4532,EEVEAKFKRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4533 23.742 717.0 166690.0 25 0 12858.0 + 16688 KEQGPYETY 9 160 557.7553065626747 1113.4960601921491 2 557.7565185427666 MULTI CID FTMS 0 0 0 4530 95628.1015625 0.3036165160043378 -6 0.0831966400146484 3 Unmodified _KEQGPYETY_ ENSG00000167325|ENST00000300738|RRM1 82.5293158979368 0.0169039238599547 1 [YE]PGQKETY 9 4 + 86.358 0.0 0.0 7.7555 7.7555 94.523 0.0 0.0 0.0 14.661258704182003 14.973024840566469 14.661258704182003 13.015384402724592 0 0.7887254899964358 1.6989700043360187 1.3807196863200843 1.2302046884880935 [YE]PGQKETY;[YE]PG[AG]KETY;[DP]YAQKETY;[YE]PGQKTEY;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}GQKETY;[YT][Y{M(Oxidation (M))|F}]KETY;[PG]YEQKETY;[DP]YA[AG]KETY;[YE]PG[AG]KTEY;{[TV]|[{I|L}S]}[MD]QKETY 7.7555;6.5867;6.4389;6.3168;5.6289;5.5352;5.4029;5.27;5.1479;5.0264 -;-;-;-;-;-;-;-;-;- 1694 1 2.362 91961.5 1.0 1320 3211 4530 DOHH2_400M_050219_1,4533 DOHH2_400M_050219_1,4533,KEQGPYETY True True KEQGPYETY 23.741644 557.756518542767 2041388.5 4530.0 ENSG00000167325|ENST00000300738|RRM1 7.1244455973307295 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4534 23.749 395.0 170000.0 25 0 20179.0 + 42573 VTQAATSVE 9 103 453.2338715673396 0 453.2344848513603 PEAK CID FTMS 0 0 0 4530 86153.796875 0.6783818618605909 -7 0.1268520355224609 4 Unmodified _VTQAATSVE_ REV__ENSG00000179698|ENST00000323662|WDR97 7.910154910731844 0.3362437653303669 1 G 1 -1 8.0989 0.0 0.0 0.89545 0.0 0.0 452.20570592589166 392.1992586725219 844.4049645984136 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 G 0.89545 - 8 + 1 2.362 56360.7 1.0 1321 3211 4530 DOHH2_400M_050219_1,4534 DOHH2_400M_050219_1,4534,VTQAATSVE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4537 23.757 95.0 802020.0 25 0 80902.0 + 33059 SEQPAKATF 9 97 489.74794707684816 977.4813412204963 2 489.7482787966728 MULTI CID FTMS 0 0 0 4536 414267.09375 0.8157358025922049 -2 0.04364013671875 1 Unmodified _SEQPAKATF_ ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153 26.268140514670165 0.1969607489560049 1 {M(Oxidation (M))|F} 1 8 13.979 0.0 0.0 1.4301 0.0 0.0 812.4021308706901 0.0 812.4021308706901 0.0 3.037275116073344 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.4301 + + 142 + 1 2.362 62543.7 1.0 1322 3213 4536 DOHH2_400M_050219_1,4537 DOHH2_400M_050219_1,4537,SEQPAKATF False True SEQPAKATF 23.757434 489.748278796673 2729240.0 4536.0 nc|ENSG00000124789|P49790-2|NUP153;;ENSG00000124789|ENST00000262077|NUP153;;nc|ENSG00000124789|P49790-3|NUP153 5.225745836893718 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4538 23.76 128.0 389750.0 25 0 32794.0 + 6976 EEIKKETGF 9 63 540.782240783948 1079.549928634696 2 540.7825805544853 MULTI CID FTMS 0 0 0 4536 398580.3125 0.3260149644252133 8 -0.2724189758300781 2 Unmodified _EEIKKETGF_ ENSG00000187446|ENST00000334660|CHP1 32.78568957990786 0.1150597335874693 1 EE{I|L}{[TV]|[{I|L}S]}[KG]TG{M(Oxidation (M))|F} 10 3 + 47.113 0.0 0.0 4.3641 4.3641 87.173 0.0 0.0 0.0 15.915149811213496 4.665762445130497 4.665762445130497 47.11303739409743 0 1.0 1.5228787452803376 0.0 0.0 EE{I|L}{[TV]|[{I|L}S]}[KG]TG{M(Oxidation (M))|F} 4.3641 - 45 + 1 2.362 43587.3 1.0 1323 3213 4536 DOHH2_400M_050219_1,4538 DOHH2_400M_050219_1,4538,EEIKKETGF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4540 23.766 185.0 655250.0 25 0 97074.0 + 14635 IIKDKHIL 8 122 490.3178853920916 978.6212178509832 2 490.3177978396416 MULTI CID FTMS 0 0 0 4539 244145.515625 0.3843376434368547 -2 0.0113544464111328 1 Unmodified _IIKDKHIL_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 49.55428908609986 0.1413437743149504 1 {I|L}{I|L}KDKH{I|L}{I|L} 8 0 + 68.554 0.0 0.0 7.0052 7.0052 93.354 0.0 0.0 0.0 45.184465535402296 5.818831717329793 5.818831717329793 14.11690979430481 0 1.5088643834802156 2.0 0.7302046884880937 0.0 + + {I|L}{I|L}KDKH{I|L}{I|L};{I|L}{I|L}K[VG]SH{I|L}{I|L};[H{I|L}]KDK{I|L}{I|L}{I|L};{I|L}{I|L}K[VG]PK[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}KH{I|L}{I|L}{I|L}{I|L};[HK]{I|L}DK{I|L}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[H{I|L}]K{I|L}{I|L}{I|L};[KA][TA]H{I|L}{I|L}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}KH{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}{I|L}H{I|L}{I|L} 7.0052;5.5626;3.5156;3.2163;2.3996;2.348;1.7825;1.2689;0.94106;0.8479 +;-;-;-;-;-;-;-;-;- + 450 + 1 2.362 94494.5 1.0 1324 3214 4539 DOHH2_400M_050219_1,4540 DOHH2_400M_050219_1,4540,IIKDKHIL False True IIKDKHIL 23.766092 490.3192 2935460.0 4539.0 ENST00000591595.5_1_19:11130023-11172489:+|nuORF;;ENSG00000080503|ENST00000349721|SMARCA2;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;nc|ENSG00000080503|P51531-2|SMARCA2;;ENSG00000127616|ENST00000344626|SMARCA4;;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 1.652135190864404 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4541 23.78 800.0 227520.0 25 0 19067.0 + 435 AEESDLSRQY 10 145 599.2726674201996 1196.530781907199 2 599.2733032107353 MULTI CID FTMS 0 0 0 4539 292277.9375 1.0 0 0.0 2 Unmodified _AEESDLSRQY_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 128.57297698046145 0.0002163614560519 1 {[CP]|[EA]}ESD{I|L}SRQY 10 0 {[CP]|[EA]} + + 94.563 5.6475 2.8226 7.9031 7.9031 64.804 0.0 0.0 0.0 0.0 35.2468080741475 0.0 0.0 0 2.353917193908117 0.0 0.75 2.3169015600442577 + + {[CP]|[EA]}ESD{I|L}SRQY 7.9031 + + 4812 + 1 2.362 135502.9 0.800000011920929 1325 3214 4539 DOHH2_400M_050219_1,4541 DOHH2_400M_050219_1,4541,AEESDLSRQY True True AEESDLSRQY 23.779923 599.273303210735 1240043.75 4539.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 8.845144589742025 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4542 23.794 800.0 181100.0 25 0 8123.3 + + 42189 VSEEDVSSRY 10 135 585.2707534210987 1168.5269539089973 2 585.7686035037041 MULTI CID FTMS 0 0 0 4539 115992.9375 0.2794274099446682 -8 0.1122798919677734 3 Unmodified _VSEEQTEGKY_ ENSG00000177425|ENST00000328827|PAWR 26.88365393820708 0.3646707531412818 1 [VS][HT]SVDEES 10 -1 61.22 0.0 0.0 5.2391 0.0 0.0 0.0 95.0519824147108 95.0519824147108 43.43826579239625 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.5356668758921828 0.0 [VS][HT]SVDEES 5.2391 - 1146 1 2.362 112840.8 0.5799999833106995 1326 3214 4539 DOHH2_400M_050219_1,4542 DOHH2_400M_050219_1,4542,VSEEQTEGKY False False VSEEDVSSRY 23.793759 585.768603503704 1011562.125 4539.0 ENSG00000177425|ENST00000328827|PAWR 6.270235379536946 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4543 23.808 800.0 239930.0 25 0 15874.0 + 9331 FIKAVHVKA 9 149 506.8180841426037 1011.6216153520074 2 506.8184081912041 MULTI CID FTMS 0 0 0 4539 112491.4375 0.5633684800296104 -1 0.0073432922363281 4 Unmodified _FIKAVHVKA_ ENSG00000132465|ENST00000254801|JCHAIN 69.10491478415734 0.0214449631113747 1 {M(Oxidation (M))|F}{I|L}KAVHVKA 9 0 + 61.742 0.0 0.0 6.1033 6.1033 92.267 0.0 0.0 0.0 37.40803747765064 10.814695960392129 10.814695960392129 22.852809580671035 0 2.309894379144197 0.0 0.0 0.6861818737241735 + + {M(Oxidation (M))|F}{I|L}KAVHVKA;{M(Oxidation (M))|F}{I|L}KAVH[KG]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KAVHVKA;{M(Oxidation (M))|F}{I|L}KAV[QP]P{I|L};{[TV]|[{I|L}S]}[RP]V{[QN]|[E{I|L}]|[KN]}KA;[TP][RV]V{[QN]|[E{I|L}]|[KN]}KA;{[TV]|[{I|L}S]}[RP]V[{I|L}T]RA;{[QV]|[N{I|L}]|[RA]|[KV]}A[QA]VVVKA;{[TV]|[{I|L}S]}[RP][{I|L}T]VRA;[TP][RV]V[{I|L}T]RA 6.1033;3.8442;3.8129;3.5241;1.9252;1.3591;1.2512;1.1449;0.94491;0.68516 +;-;+;-;-;-;-;-;-;- + 572 + 1 2.362 147002.0 0.5299999713897705 1327 3214 4539 DOHH2_400M_050219_1,4543 DOHH2_400M_050219_1,4543,FIKAVHVKA True True FIKAVHVKA 23.807575 506.818408191204 932083.375 4539.0 ENSG00000132465|ENST00000254801|JCHAIN 5.958510557810466 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4545 23.82 602.0 290420.0 25 0 19723.0 + 24824 MPKKNRIAI 9 180 357.5546161192784 1069.6420189580354 3 357.5540954470634 MULTI CID FTMS 0 0 0 4544 56927.14453125 0.5478047325316198 3 -0.091806411743164 1 Unmodified _MPKKNRIAI_ chr6:34425221-34425583|48|67.1|0.0|22.68|-|ENST00000494077|RPS10-NUDT3,RPS10;ENSG00000124614|ENST00000648437|RPS10;nc|ENSG00000101278|Q9NQ39|RPS10P5 10.823927491677226 0.5436922275383211 1 MPK{I|L} 4 5 30.918 0.0 0.0 2.8905 0.0 0.0 0.0 597.3479097955686 597.3479097955686 11.453650195120844 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 MPK{I|L} 2.8905 - 50 + 1 2.362 144355.0 1.0 1328 3215 4544 DOHH2_400M_050219_1,4545 DOHH2_400M_050219_1,4545,MPKKNRIAI False True MPKKNRIAI 23.820265 357.554095447063 561529.125 4544.0 nc|ENSG00000101278|Q9NQ39|RPS10P5;;ENSG00000124614|ENST00000648437|RPS10;;chr6:34425221-34425583|48|67.1|0.0|22.68|-|ENST00000494077|RPS10-NUDT3,RPS10 3.707340717315674 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4546 23.826 341.0 357870.0 25 0 32730.0 19236 LEHVEKIRL 9 135 379.5637275490022 1135.6693532472066 3 379.5638915896416 MULTI CID FTMS 0 0 0 4544 221266.578125 0.3028411082675074 -3 0.0585708618164062 2 Unmodified _LEHVEKIRL_ ENSG00000125375|ENST00000557421|DMAC2L;ENST00000554438.5_1_14:50779073-50792438:+|nuORF;ENST00000555939.5_1_14:50779073-50791268:+|nuORF;ENST00000556962.1_1_14:50789283-50790835:+|nuORF 12.531546534597751 0.4974689918368763 1 [{I|L}T]{M(Oxidation (M))|F}KKQE{I|L} 8 6 25.505 0.0 0.0 2.2458 0.0 0.0 0.0 145.0975388933554 145.0975388933554 6.6309378647251584 0.0 0.0 0.0 0 0.0 0.0 1.0 0.8494850021680094 [{I|L}T]{M(Oxidation (M))|F}KKQE{I|L} 2.2458 - 498 1 2.362 95408.4 1.0 1329 3215 4544 DOHH2_400M_050219_1,4546 DOHH2_400M_050219_1,4546,LEHVEKIRL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4547 23.835 490.0 165230.0 25 0 8776.5 + 33163 SEYARPHVM 9 140 545.261032245279 0 545.2610961794853 PEAK CID FTMS 0 0 0 4544 106497.828125 0.983070534008862 -2 0.0545597076416015 3 Unmodified _SEYARPHVM_ ENSG00000111676|ENST00000396684|ATN1;ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE 33.4449034751529 0.0939430949041602 1 M 1 8 14.124 0.0 0.0 1.2976 0.0 0.0 248.11961432527045 706.3448580377561 954.4644723630264 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 + M 1.2976 + + 106 + 1 2.362 66308.6 1.0 1330 3215 4544 DOHH2_400M_050219_1,4547 DOHH2_400M_050219_1,4547,SEYARPHVM True True SEYARPHVM 23.835098 545.261096179485 660104.8125 4544.0 ENSG00000142599|ENST00000400908|RERE;;ENSG00000111676|ENST00000396684|ATN1;;nc|ENSG00000142599|Q9P2R6-2|RERE 6.612747351328532 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4548 23.838 150.0 492320.0 25 0 48903.0 + 6481 EAHARIHL 8 120 473.7640909729156 945.5136290126312 2 473.7640563845634 MULTI CID FTMS 0 0 0 4544 193222.515625 0.563897981233498 -5 0.1157245635986328 4 Unmodified _EAHARIHL_ ENSG00000073111|ENST00000265056|MCM2;ENST00000468414.1_1_3:127336783-127340613:+|nuORF;ENST00000474964.5_1_3:127323572-127340613:+|nuORF 61.357469665136826 0.1155423183535659 1 [HA]EAR{I|L}H{I|L} 8 2 + 34.729 0.0 0.0 3.673 3.673 81.659 0.0 0.0 0.0 11.29416157934763 11.29416157934763 11.29416157934763 11.29416157934763 0 1.1435078169319297 0.0 1.5669015600442575 0.0 [HA]EAR{I|L}H{I|L};{[CP]|[EA]}HAR{I|L}{I|L}H 3.673;2.4785 -;- 86 1 2.362 60160.8 1.0 1331 3215 4544 DOHH2_400M_050219_1,4548 DOHH2_400M_050219_1,4548,EAHARIHL True True EAHARIHL 23.838071 473.764056384563 1821072.0 4544.0 ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2;;ENST00000468414.1_1_3:127336783-127340613:+|nuORF 4.558708349863688 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4549 23.846 475.0 151180.0 25 0 32837.0 + 28718 PVSWVLWEGTE 11 68 434.8818642444381 0 434.8817626833916 PEAK CID FTMS 0 0 0 4544 103823.8515625 0.8000843464489754 -4 0.0981998443603515 5 Unmodified _PVSWVLWEGTE_ REV__ENST00000532654.5_1_11:78775723-78781043:-|nuORF 1.3296431237094175 0.4761840153648598 1 T 1 -1 6.2591 0.0 0.0 0.7213 0.0 0.0 433.53709167071366 330.1514071100219 763.6884987807356 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 T 0.7213 + + 1 + 1 2.362 64615.5 1.0 1332 3215 4544 DOHH2_400M_050219_1,4549 DOHH2_400M_050219_1,4549,PVSWVLWEGTE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4551 23.854 282.0 278650.0 25 0 49928.0 -1 0 107 502.28252589616807 501.2752494295681 1 502.2826110720634 MULTI CID FTMS 0 0 0 4550 78024.4375 0.4973810511553366 -4 0.0972919464111328 1 1 [HK]T 3 -1 10.458 0.0 0.0 2.0862 0.0 0.0 0.0 132.0457705133422 132.0457705133422 0.6246936830415013 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [HK]T 2.0862 - 15 + 1 2.362 64104.6 1.0 1333 3216 4550 DOHH2_400M_050219_1,4551 DOHH2_400M_050219_1,4551, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4552 23.867 800.0 159260.0 25 0 17222.0 7350 EGAGGGLLEEG 11 153 494.7332328793562 987.4519128255124 2 494.7325622439384 MULTI CID FTMS 0 0 0 4550 99088.7109375 0.5922789957119696 -2 0.0859375 2 Unmodified _EGAGGGLLEEG_ ENSG00000124203|ENST00000371030|ZNF831 15.248480904072842 0.7179608125786238 1 QEGGG[NG]PYG 10 6 51.324 0.0 0.0 5.1976 0.0 0.0 0.0 68.05133234195546 68.05133234195546 32.1277502416482 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 QEGGG[NG]PYG 5.1976 - 1227 + 1 2.362 99708.4 0.5199999809265137 1334 3216 4550 DOHH2_400M_050219_1,4552 DOHH2_400M_050219_1,4552,EGAGGGLLEEG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4554 23.886 800.0 233350.0 25 0 16052.0 + 1607 ALLNARSVPI 10 193 351.88566587441983 1052.6351682234597 3 351.8842956423759 MULTI CID FTMS 0 0 0 4553 177269.765625 1.0 0 0.0 1 Unmodified _ALLNARSVPI_ ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3 27.628801355627647 0.3479284626772844 1 A{I|L}V[SG]{I|L}K 7 7 54.332 0.0 0.0 5.1615 0.0 0.0 0.0 381.1892489068969 381.1892489068969 42.1135621694261 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.7134679910804405 A{I|L}V[SG]{I|L}K 5.1615 - 247 + 1 2.346 154850.2 0.6100000143051147 1335 3217 4553 DOHH2_400M_050219_1,4554 DOHH2_400M_050219_1,4554,ALLNARSVPI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4555 23.9 800.0 29160.0 25 0 1886.0 -1 0 43 844.1066161990166 0 844.1066161990166 PEAK CID FTMS 0 0 0 -1 0 2 1 R 1 -1 8.3718 0.0 0.0 0.49649 0.0 0.0 855.4682850329956 671.6247042291624 1527.092989262158 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 R 0.49649 - 2 + 1 2.346 24999.3 0.5299999713897705 1336 3217 4553 DOHH2_400M_050219_1,4555 DOHH2_400M_050219_1,4555, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4557 23.915 800.0 136950.0 25 0 9336.9 + 1850 ALVERKQPL 9 146 527.3231648860411 1052.6317768388822 2 527.3235351443291 MULTI CID FTMS 0 0 0 4556 130640.1484375 1.0 0 0.0 1 Unmodified _ALVERKQPL_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 34.93206674587334 0.1032771302489716 1 A{I|L}VE 4 5 55.745 0.0 0.0 5.2958 0.0 0.0 0.0 637.3853243463499 637.3853243463499 30.08504468558076 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + A{I|L}VE 5.2958 + + 306 + 1 2.346 88594.8 0.6200000047683716 1337 3218 4556 DOHH2_400M_050219_1,4557 DOHH2_400M_050219_1,4557,ALVERKQPL True True ALVERKQPL 23.915385 527.323535144329 1627228.6875 4556.0 nc|ENSG00000141030|Q9UNS2-2|COPS3;;ENSG00000141030|ENST00000268717|COPS3 5.4503278732299805 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4558 23.917 48.0 1142600.0 25 0 107930.0 38012 TPAFFSQTPI 10 93 554.788299632851 1107.562046332502 2 554.7878295779228 MULTI CID FTMS 0 0 0 4556 1424502.375 1.0 0 0.0 2 Unmodified _TPAFFSQTPI_ ENSG00000158711|ENST00000357992|ELK4 16.149105407346934 0.5765757077271437 1 TP{M(Oxidation (M))|F}K 4 7 32.109 0.0 0.0 2.8991 0.0 0.0 0.0 631.3150118463499 631.3150118463499 12.628333601982009 0.0 0.0 0.0 0 0.218765315847925 1.5228787452803376 0.0 0.0 TP{M(Oxidation (M))|F}K 2.8991 - 80 + 1 2.346 50193.2 1.0 1338 3218 4556 DOHH2_400M_050219_1,4558 DOHH2_400M_050219_1,4558,TPAFFSQTPI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4559 23.931 800.0 186240.0 25 0 10318.0 + 29487 QLKHKLEQL 9 151 568.8415646715547 1135.6685764099093 2 568.8424560427666 MULTI CID FTMS 0 0 0 4556 174345.796875 0.784777313435943 -1 0.0321388244628906 3 Unmodified _QLKHKLEQL_ ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC 89.40071534611396 0.0152361884002446 1 Q{I|L}KH{[TV]|[{I|L}S]}G{I|L}Q{I|L} 10 3 + 64.338 0.0 0.0 5.6652 5.6652 78.982 0.0 0.0 0.0 9.164539485499256 2.406972771873093 2.406972771873093 2.406972771873093 0 1.4489700043360187 1.3979400086720375 0.3054621874040891 1.2971062485323517 Q{I|L}KH{[TV]|[{I|L}S]}G{I|L}Q{I|L};Q{I|L}KH{[TV]|[{I|L}S]}G{I|L}{I|L}Q;Q{I|L}K{I|L}[HS]G{I|L}Q{I|L};Q{I|L}K{I|L}[HS]G{I|L}{I|L}Q;Q{I|L}KH{[TV]|[{I|L}S]}[KS]VP;Q{I|L}K{I|L}[HS][KS]VP;[HK]{I|L}KEQ{I|L}Q{I|L};[HK]{I|L}KQE{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[KT][K{I|L}]EY{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}H[RN]{I|L}Q{I|L} 5.6652;5.4533;4.9049;4.6929;3.8557;3.0954;2.2744;2.1193;2.113;1.992 -;-;-;-;-;-;-;-;-;- 1487 + 1 2.346 114977.9 0.8399999737739563 1339 3218 4556 DOHH2_400M_050219_1,4559 DOHH2_400M_050219_1,4559,QLKHKLEQL True True QLKHKLEQL 23.930524 568.842456042767 1394918.25 4556.0 nc|ENSG00000136997|P01106-3|MYC;;nc|ENSG00000136997|P01106-1|MYC;;ENSG00000136997|ENST00000621592|MYC 4.445228735605876 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4560 23.941 607.0 238990.0 25 0 25014.0 -1 0 140 561.3116000115137 560.3043235449137 1 561.3105346560478 MULTI CID FTMS 0 0 0 4556 395803.4375 0.1329860999989332 -79 2.34231948852539 4 1 Y 1 -1 10.969 0.0 0.0 1.9577 0.0 0.0 379.2302096306543 0.0 379.2302096306543 0.0 -2.0954424394881066 -2.0954424394881066 0.0 0 0.0 0.0 0.0 0.0 Y 1.9577 - 15 + 1 2.346 112898.2 1.0 1340 3218 4556 DOHH2_400M_050219_1,4560 DOHH2_400M_050219_1,4560, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4562 23.945 120.0 446750.0 25 0 33383.0 + 10644 FVQLCPYKGQG 11 77 620.3130774713335 1238.6116020094669 2 620.3120605349541 MULTI CID FTMS 0 0 0 4561 478393.6875 0.8385687787425093 -1 0.0414409637451171 1 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 16.149105407346934 0.6992268271266642 1 {[HG]|PP}MAPPPPPPQN 12 -1 {[HG]|PP}MA + + 74.339 10.177 2.5688 6.0018 6.0018 60.307 0.0 0.0 0.0 0.0 52.65616992822601 0.0 0.0 0 2.774227503252014 0.0 0.0 1.372363747448347 {[HG]|PP}MAPPPPPPQN 6.0018 - 1351 + 1 2.346 45810.7 1.0 1341 3219 4561 DOHH2_400M_050219_1,4562 DOHH2_400M_050219_1,4562,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4563 23.959 800.0 146260.0 25 0 8633.5 -1 0 111 694.3147114225866 2079.92230486796 3 694.6479369997978 MULTI CID FTMS 0 0 0 4561 214782.25 0.3535012767750382 -3 0.0945262908935546 2 1 GWTGRW 6 -1 51.916 0.0 0.0 2.4961 0.0 0.0 1318.5900839623466 0.0 1318.5900839623466 0.0 31.09189699011423 0.0 0.0 0 0.805462187404089 0.0 0.9247425010840048 0.0 GWTGRW 2.4961 - 611 1 2.346 91329.1 0.8100000023841858 1342 3219 4561 DOHH2_400M_050219_1,4563 DOHH2_400M_050219_1,4563, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4564 23.962 142.0 385420.0 25 0 32252.0 + -1 EKSLSQGMHH 10 85 585.2707534210987 1168.5269539089973 2 585.2718383669853 MULTI CID FTMS 0 0 0 4561 345171.21875 0.4382080800240768 -2 0.0735797882080078 3 Oxidation (M) _EKSLSQGM(Oxidation (M))HH_ REV__ENST00000526769.3_1_11:6735844-6741409:-|nuORF;REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1 9.38312468134398 0.6832340498775793 1 KEMRRM 6 -1 39.201 0.0 0.0 3.3547 0.0 0.0 97.97320401832424 236.1042421930297 334.077446211354 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.4247425010840047 KEMRRM 3.3547 - 170 + 1 2.346 46111.6 1.0 1343 3219 4561 DOHH2_400M_050219_1,4564 DOHH2_400M_050219_1,4564,EKSLSQGMHH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4565 23.966 188.0 425430.0 25 0 93484.0 28780 PYFVEKPQ 8 94 504.2645080076305 0 504.2632018923759 PEAK CID FTMS 0 0 0 4561 323828.8125 0.7640870626048659 35 -1.1333084106445312 4 Unmodified _PYFVEKPQ_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 19.438996006549623 0.4285751805470146 1 {I|L}G[TA]YP 6 7 15.406 0.0 0.0 1.5306 0.0 0.0 258.1310782074377 143.04607568912346 401.1771538965612 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}G[TA]YP 1.5306 - 87 + 1 2.346 69723.3 1.0 1344 3219 4561 DOHH2_400M_050219_1,4565 DOHH2_400M_050219_1,4565,PYFVEKPQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4566 23.98 800.0 142240.0 25 0 16903.0 -1 0 51 1108.3098409179988 6643.815386708393 6 1108.804858386517 MULTI CID FTMS 0 0 0 4561 152971.875 0.6503864339203278 -1 0.0414409637451171 5 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.346 79856.4 0.6499999761581421 1345 3219 4561 DOHH2_400M_050219_1,4566 DOHH2_400M_050219_1,4566, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4568 23.997 738.0 298940.0 25 0 17758.0 + 40188 VGPTTGRPQL 10 187 513.2897994321389 1024.5650459310775 2 513.2899047732353 MULTI CID FTMS 0 0 0 4567 231346.0 0.260803585702649 -3 0.1121044158935546 1 Unmodified _VGPTTGRPQL_ REV__ENST00000576886.5_1_16:2834849-2835800:-|nuORF 45.69961567697781 0.105390671673896 1 [VG]PTGAR[PS]A{I|L} 11 -1 + 73.936 0.0 0.0 7.2163 7.2163 88.626 0.0 0.0 0.0 33.11691715698953 0.5720677406023071 0.5720677406023071 7.1238546235495335 0 2.4023722004121453 2.0 0.805462187404089 0.0 [VG]PTGAR[PS]A{I|L};[VG]PTGAR[{I|L}A]SP;[VG]PTGA{I|L}WKP;[VG]PTQR[PS]A{I|L};[VG]PTGAR[TA]VP;[VG]PTGA{I|L}[KP]W;[VG]PTGAR[TA]PV;[VG]PTGA{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}SP;[VG]PTGTQ{I|L}PR;[VG]PTQR[{I|L}A]SP 7.2163;6.521;6.4608;6.2764;6.2734;6.0774;5.8746;5.7959;5.6807;5.5811 -;-;-;-;-;-;-;-;-;- 3784 + 1 2.31 178080.8 1.0 1346 3220 4567 DOHH2_400M_050219_1,4568 DOHH2_400M_050219_1,4568,VGPTTGRPQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4569 23.999 99.0 612530.0 25 0 31881.0 + 8000 EMKEKKPEM 9 90 383.86051664516833 1148.559720535705 3 383.8603393435478 MULTI CID FTMS 0 0 0 4567 401220.6875 0.1633926279801353 -3 0.1121044158935546 2 Unmodified _EMKEKKPEM_ REV__ENSG00000102755|ENST00000282397|FLT1;REV__nc|ENSG00000102755|P17948-5|FLT1;REV__nc|ENSG00000102755|P17948-6|FLT1 18.1463463914782 0.3454829746528889 1 EM 2 -1 23.003 0.0 0.0 2.0028 0.0 0.0 870.4667289754667 0.0 870.4667289754667 0.0 3.7949345513180752 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 EM 2.0028 + + 24 1 2.31 52830.3 1.0 1347 3220 4567 DOHH2_400M_050219_1,4569 DOHH2_400M_050219_1,4569,EMKEKKPEM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4570 24.012 739.0 166050.0 25 0 10712.0 -1 0 130 594.3331009473079 593.3258244807079 1 594.3323242068291 MULTI CID FTMS 0 0 0 4567 219229.078125 0.6864637967340932 -1 0.0385246276855468 3 1 Y 1 -1 9.3971 0.0 0.0 1.5838 0.0 0.0 412.2516647900813 0.0 412.2516647900813 0.0 0.6734928694872799 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5838 - 17 + 1 2.31 96018.0 1.0 1348 3220 4567 DOHH2_400M_050219_1,4570 DOHH2_400M_050219_1,4570, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4571 24.026 800.0 225790.0 25 0 41393.0 + -1 HESMKILEF 9 139 575.2865113076895 1148.5584696821788 2 575.7868530154228 MULTI CID FTMS 0 0 0 4567 180264.828125 0.2333210413028403 -3 0.1121044158935546 4 Oxidation (M) _HESM(Oxidation (M))KILEF_ REV__ENST00000346128.10_1_15:29993602-29993677:-|nuORF 19.256988751693697 0.3154191944385105 1 QM 2 -1 17.563 0.0 0.0 1.5291 0.0 0.0 871.4491696431718 0.0 871.4491696431718 0.0 4.3753063169585005 0.0 0.0 0 0.0 0.0 0.0 0.5 QM 1.5291 - 377 + 1 2.31 139197.5 0.9900000095367432 1349 3220 4567 DOHH2_400M_050219_1,4571 DOHH2_400M_050219_1,4571,HESMKILEF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4573 24.03 51.0 749280.0 25 0 61955.0 + 42352 VTDDSPKYNY 10 68 601.2712549687235 1200.527957004247 2 601.2709228396416 MULTI CID FTMS 0 0 0 4572 1007480.9375 1.0 0 0.0 1 Unmodified _VTDDSPKYNY_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 34.93206674587334 0.2110832994570416 1 VTDDS 5 5 66.013 0.0 0.0 5.4987 0.0 0.0 0.0 680.3041208809498 680.3041208809498 48.0377274119369 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + VTDDS 5.4987 + + 235 + 1 2.31 31250.3 1.0 1350 3221 4572 DOHH2_400M_050219_1,4573 DOHH2_400M_050219_1,4573,VTDDSPKYNY False True VTDDSPKYNY 24.029853 601.270922839642 6636159.5 4572.0 nc|ENSG00000090861|P49588-2|AARS1;;ENSG00000090861|ENST00000261772|AARS1 7.047502199808757 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4574 24.034 231.0 424320.0 25 0 102310.0 + 14636 IIKDKHIL 8 101 490.3178853920916 978.6212178509832 2 490.3170349001884 MULTI CID FTMS 0 0 0 4572 135710.3125 0.2136372710463505 5 -0.2652225494384765 2 Unmodified _IIKDKHIL_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 21.74664581756881 0.5868176546531598 1 {I|L}{I|L}K 3 5 29.819 0.0 0.0 3.0471 0.0 0.0 0.0 621.3377779596311 621.3377779596311 16.877896129955268 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {I|L}{I|L}K 3.0471 + + 236 + 1 2.31 79253.1 1.0 1351 3221 4572 DOHH2_400M_050219_1,4574 DOHH2_400M_050219_1,4574,IIKDKHIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4575 24.037 148.0 648840.0 25 0 45154.0 + 508 AEHDRIARQW 10 91 427.8860874669031 1280.6364330009094 3 427.8860961794853 MULTI CID FTMS 0 0 0 4572 293442.46875 0.9232932318835776 -1 0.0460872650146484 3 Unmodified _AEHDRIARQW_ ENSG00000170035|ENST00000410062|UBE2E3 36.506200033944 0.1944608063770638 1 AEHDR{I|L} 6 4 71.363 0.0 0.0 5.5725 0.0 0.0 0.0 556.2651461236936 556.2651461236936 58.17532531436136 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.4247425010840047 0.7742275032520141 + AEHDR{I|L} 5.5725 + + 121 + 1 2.31 79531.0 1.0 1352 3221 4572 DOHH2_400M_050219_1,4575 DOHH2_400M_050219_1,4575,AEHDRIARQW False True AEHDRIARQW 24.037134 427.886096179485 2058943.375 4572.0 ENSG00000170035|ENST00000410062|UBE2E3 4.285127719243367 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4576 24.051 800.0 146690.0 25 0 9771.0 + -1 KEVDVSKQL 9 137 523.799462041425 0 523.7988159060478 PEAK CID FTMS 0 0 0 4572 142213.5625 1.0 0 0.0 4 Oxidation (M) _GVTVALVM(Oxidation (M))QI_ ENSG00000128944|ENST00000249776|KNSTRN;ENST00000560673.1_1_15:40675453-40678696:+|nuORF;nc|ENSG00000128944|Q9Y448-2|KNSTRN;nc|ENSG00000128944|Q9Y448-3|KNSTRN;ENST00000560220.5_1_15:40676698-40685795:+|nuORF 22.736283301280096 0.276231959287006 1 EKSVDP 6 -1 31.865 0.0 0.0 3.0475 0.0 0.0 131.09565146321057 256.13083826236567 387.2264897255762 0.0 0.0 0.0 0.0 0 1.0629529932484498 0.0 0.0 0.0 EKSVDP 3.0475 - 146 + 1 2.31 92022.8 0.9300000071525574 1353 3221 4572 DOHH2_400M_050219_1,4576 DOHH2_400M_050219_1,4576,GVTVALVMQI False False KEVDVSKQL 24.050965 523.2978 1403884.25 4572.0 ENSG00000128944|ENST00000249776|KNSTRN;;ENST00000560673.1_1_15:40675453-40678696:+|nuORF;;nc|ENSG00000128944|Q9Y448-2|KNSTRN;;nc|ENSG00000128944|Q9Y448-3|KNSTRN;;ENST00000560220.5_1_15:40676698-40685795:+|nuORF 4.52814515431722 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4578 24.068 800.0 148690.0 25 0 30593.0 + 38424 TRMRHVISY 9 118 581.8099162150347 1161.6052794968691 2 581.8102294802666 MULTI CID FTMS 0 0 0 4577 72118.2421875 0.5889385671604083 1 -0.0781288146972656 1 Unmodified _TRMRHVISY_ ENSG00000164405|ENST00000378670|UQCRQ;ENST00000498309.1_1_5:132202377-132202798:+|nuORF 21.53697664764585 0.2571576504437394 1 {[RE]|[WV]}{I|L}V 4 7 29.208 0.0 0.0 2.5145 0.0 0.0 0.0 661.2982134744681 661.2982134744681 3.2390874094431865 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[RE]|[WV]}{I|L}V 2.5145 - 173 + 1 2.279 91731.2 0.8199999928474426 1354 3222 4577 DOHH2_400M_050219_1,4578 DOHH2_400M_050219_1,4578,TRMRHVISY False True TRMRHVISY 24.068063 581.810229480267 562336.375 4577.0 ENSG00000164405|ENST00000378670|UQCRQ;;ENST00000498309.1_1_5:132202377-132202798:+|nuORF 6.454309622446696 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4579 24.081 733.0 200030.0 25 0 12736.0 + 31217 RLQGANTL 8 167 436.75052442884646 871.4864959244929 2 436.7502014040947 MULTI CID FTMS 0 0 0 4577 288719.78125 1.0 0 0.0 2 Unmodified _RLQGANTL_ ENSG00000158711|ENST00000357992|ELK4 34.10243960390752 0.3329570729325616 1 [RV]NVGNT{I|L} 8 4 + 48.612 0.0 0.0 5.5781 5.5781 82.738 0.0 0.0 0.0 3.6894844492519496 29.152438294129947 3.6894844492519496 6.064921830680703 0 0.9247425010840048 0.0 0.3252574989159953 0.6549471895720984 [RV]NVGNT{I|L};{[NV]|[RG]}RVGNT{I|L};[RV]NVGGGT{I|L};[RV]GGVGNT{I|L};[VP]TRWT{I|L};{[NV]|[RG]}RVGGGT{I|L};[RV]GGVGGGT{I|L};[KG][H{I|L}]{[CT]|[{M(Oxidation (M))|F}G]}T{I|L};[VP]T[WK]E{I|L};[RV][KG][NG]E{I|L} 5.5781;4.8822;4.5153;4.5153;3.9406;3.8194;3.4587;2.6045;2.1901;0.67778 -;-;-;-;-;-;-;-;-;- 286 1 2.279 113502.4 1.0 1355 3222 4577 DOHH2_400M_050219_1,4579 DOHH2_400M_050219_1,4579,RLQGANTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4580 24.087 370.0 311300.0 25 0 27771.0 4487 DAYEELLTQ 9 140 361.1737546121889 1080.4994344367667 3 361.1724120974541 MULTI CID FTMS 0 0 0 4577 215355.078125 0.7216234490257601 1 -0.0781288146972656 3 Unmodified _DAYEELLTQ_ ENSG00000145703|ENST00000274364|IQGAP2 14.838274106304384 0.4350285940865338 1 {[SA]|[TG]}WQQ{I|L}WY 8 7 {[SA]|[TG]}WQQ{I|L}W + + 13.495 11.03 1.2264 1.2489 1.2489 48.406 0.0 0.0 0.0 0.0 -14.28456906244314 -14.28456906244314 0.0 0 0.0 0.0 0.0 0.0 {[SA]|[TG]}WQQ{I|L}WY 1.2489 - 145 + 1 2.279 98074.3 1.0 1356 3222 4577 DOHH2_400M_050219_1,4580 DOHH2_400M_050219_1,4580,DAYEELLTQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4581 24.101 800.0 186990.0 25 0 24289.0 + 8461 ESSQHTLNY 9 149 539.7430988668224 1077.471644800445 2 539.7431518435478 MULTI CID FTMS 0 0 0 4577 187203.671875 1.0 0 0.0 4 Unmodified _ESSQHTLNY_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 43.85829265575387 0.0542763391141878 1 [TP]D[QP]M{I|L}NY 9 5 + 38.297 0.0 0.0 3.5544 3.5544 74.526 0.0 0.0 0.0 12.838389027182076 10.35187660689884 10.35187660689884 4.648167490521168 0 1.079689690656103 0.0 0.3252574989159953 0.7134679910804405 [TP]D[QP]M{I|L}NY;[QA]N[QP]M{I|L}NY;[TP]D{[QD]|[EN]|[WG]|[KD]|[RS]}[EP]NY;{[ES]|[DT]|[{I|L}C]}P[QP]M{I|L}NY;[QA]N{[QD]|[EN]|[WG]|[KD]|[RS]}[EP]NY;[TP]D[VP]C(Carbamidomethyl (C)){I|L}NY;[TP]D{I|L}T{[WS]|[C(Carbamidomethyl (C)){I|L}]}MQ;[TP]D{I|L}[WD]{[QG]|[NA]}{M(Oxidation (M))|F};[QA]N[VP]C(Carbamidomethyl (C)){I|L}NY;{[ES]|[DT]|[{I|L}C]}P{[QD]|[EN]|[WG]|[KD]|[RS]}[EP]NY 3.5544;3.123;2.8607;2.6152;2.4293;2.4032;2.2894;1.9987;1.9718;1.9215 -;-;-;-;-;-;-;-;-;- 916 + 1 2.279 114266.4 0.9399999976158142 1357 3222 4577 DOHH2_400M_050219_1,4581 DOHH2_400M_050219_1,4581,ESSQHTLNY True True ESSQHTLNY 24.101238 539.743151843548 1181295.25 4577.0 ENST00000394768.6_2_14:64542710-64692241:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2;;nc|ENSG00000054654|Q8WXH0-7|SYNE2 5.794390042622884 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4582 24.115 800.0 312440.0 25 0 91280.0 + 36875 TENTEENRRFY 11 82 729.8336271608207 1457.6527013884413 2 729.8315917849541 MULTI CID FTMS 0 0 0 4577 131252.453125 0.3019425253080618 -1 0.025299072265625 5 Unmodified _TENTEENRRFY_ ENSG00000149925|ENST00000642816|ALDOA;ENST00000564521.6_1_16:30075769-30079042:+|nuORF;ENST00000566012.1_1_16:30077179-30079547:+|nuORF;nc|ENSG00000149925|P04075|ALDOA 61.16457814134879 0.0644188075391754 1 YT[Y{M(Oxidation (M))|F}]E[RN]R{M(Oxidation (M))|F} 9 6 42.202 0.0 0.0 2.8952 0.0 0.0 0.0 178.05071436099846 178.05071436099846 13.78530614985209 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.8494850021680094 YT[Y{M(Oxidation (M))|F}]E[RN]R{M(Oxidation (M))|F} 2.8952 - 220 + 1 2.279 173904.1 0.7599999904632568 1358 3222 4577 DOHH2_400M_050219_1,4582 DOHH2_400M_050219_1,4582,TENTEENRRFY True True TENTEENRRFY 24.115069 729.831591784954 3191766.25 4577.0 ENST00000566012.1_1_16:30077179-30079547:+|nuORF;;nc|ENSG00000149925|P04075|ALDOA;;ENSG00000149925|ENST00000642816|ALDOA;;ENST00000564521.6_1_16:30075769-30079042:+|nuORF 9.870323499043783 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4583 24.129 800.0 87718.0 25 0 22970.0 -1 0 46 1084.784046207537 3251.3303092228107 3 1085.450732409954 MULTI CID FTMS 0 0 0 4577 128033.71875 0.6735660508212802 -1 0.025299072265625 6 1 YG 2 -1 9.464 0.0 0.0 0.29108 0.0 0.0 1693.5930788534731 1334.6344183315018 3028.2274971849747 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.29108 - 17 + 1 2.279 70442.8 0.6100000143051147 1359 3222 4577 DOHH2_400M_050219_1,4583 DOHH2_400M_050219_1,4583, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4585 24.145 753.0 159430.0 25 0 7349.5 + 30747 RHARLSRQL 9 182 379.5637275490022 1135.6693532472066 3 379.5638610720634 MULTI CID FTMS 0 0 0 4584 19057.529296875 0.0260834841936484 5 -0.2283153533935547 1 Unmodified _RHARLSRQL_ REV__ENST00000603175.1_1_2:74729816-74730080:+|nuORF 4.3292370932331545 0.7635526921153418 1 {I|L} 1 -1 13.495 0.0 0.0 1.1883 0.0 0.0 1004.5742432391972 0.0 1004.5742432391972 0.0 4.346158598654881 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1883 + + 112 + 1 2.259 96404.8 1.0 1360 3223 4584 DOHH2_400M_050219_1,4585 DOHH2_400M_050219_1,4585,RHARLSRQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4586 24.147 35.0 1550900.0 25 0 192980.0 + 36876 TENTEENRRFY 11 56 486.8912138229751 1457.6518120691253 3 486.8910095095634 MULTI CID FTMS 0 0 0 4584 1357082.375 0.7815045597835933 -1 0.0781288146972656 2 Unmodified _TENTEENRRFY_ ENSG00000149925|ENST00000642816|ALDOA;ENST00000564521.6_1_16:30075769-30079042:+|nuORF;ENST00000566012.1_1_16:30077179-30079547:+|nuORF;nc|ENSG00000149925|P04075|ALDOA 15.538449434065043 0.7119291465483839 1 TEYN 4 8 68.175 0.0 0.0 4.6771 0.0 0.0 0.0 947.4347462964372 947.4347462964372 51.70941280735775 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.4247425010840047 0.4247425010840047 TEYN 4.6771 - 86 + 1 2.259 48564.4 1.0 1361 3223 4584 DOHH2_400M_050219_1,4586 DOHH2_400M_050219_1,4586,TENTEENRRFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4587 24.15 154.0 508700.0 25 0 60182.0 + 17743 KPYQKVGL 8 104 466.7818392103827 931.5491254875654 2 466.7812072634697 MULTI CID FTMS 0 0 0 4584 339287.65625 0.5738219615810275 -1 0.0781288146972656 3 Unmodified _KPYQKVGL_ ENSG00000163104|ENST00000354268|SMARCAD1;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;nc|ENSG00000163104|Q9H4L7-3|SMARCAD1 42.09456458481378 0.1992492688217789 1 KPYQKVG{I|L} 8 0 + 50.109 0.0 0.0 5.3791 5.3791 86.637 0.0 0.0 0.0 28.057612900412472 12.5190243216651 12.5190243216651 9.262137858390815 0 1.610924374808178 0.0 0.0 0.0 + + KPYQKVG{I|L};KPY[AG]KVG{I|L};K[VS]VCKVG{I|L};KP[K{I|L}][YN]G{I|L} 5.3791;4.3848;3.7871;2.4353 +;-;-;- + 561 + 1 2.259 66787.3 1.0 1362 3223 4584 DOHH2_400M_050219_1,4587 DOHH2_400M_050219_1,4587,KPYQKVGL False True KPYQKVGL 24.149604 466.78120726347 3553290.5 4584.0 nc|ENSG00000163104|Q9H4L7-3|SMARCAD1;;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;;ENSG00000163104|ENST00000354268|SMARCAD1 4.089913209279378 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4588 24.155 286.0 377330.0 25 0 36818.0 + 42043 VQTVAGTL 8 130 394.72850918977895 0 394.7283813357353 PEAK CID FTMS 0 0 0 4584 254741.015625 1.0 0 0.0 4 Unmodified _VQTVAGTL_ REV__chr15:31223043-31223250|25|14.04|0.15|6.58|-|0|TE_info:MER8,MER8_dup1655,TcMar-Tigger,DNA,acceptor,-,31223014,31223043|None,LINC03034|1 18.13498045792455 0.4501116112875982 1 VTN 3 -1 10.302 0.0 0.0 1.3082 0.0 0.0 277.1631818543641 193.09868799381096 470.2618698481752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.9896518287104438 VTN 1.3082 - 126 + 1 2.259 88742.3 1.0 1363 3223 4584 DOHH2_400M_050219_1,4588 DOHH2_400M_050219_1,4588,VQTVAGTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4589 24.169 800.0 392120.0 25 0 22824.0 + -1 ELLKRSEKL 9 227 558.2094601214503 1114.4043673097003 2 558.2101318240166 MULTI CID FTMS 0 0 0 4584 146816.359375 0.0336051220985479 -4 0.1880397796630859 5 2 Carbamidomethyl (C) _SGDC(Carbamidomethyl (C))FADLAC(Carbamidomethyl (C))_ ENSG00000092853|ENST00000318121|CLSPN;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN 25.399314129420983 0.3980215340001851 1 CTT{I|L}HY 6 -1 42.638 0.0 0.0 3.8261 0.0 0.0 378.0876691669256 0.0 378.0876691669256 0.0 7.54554718523508 0.0 0.0 0 0.25 0.0 0.4247425010840047 0.0 CTT{I|L}HY 3.8261 - 1049 + 1 2.259 233599.9 0.800000011920929 1364 3223 4584 DOHH2_400M_050219_1,4589 DOHH2_400M_050219_1,4589,SGDCFADLAC False False ELLKRSEKL 24.168687 558.210131824017 1005448.4375 4584.0 ENSG00000092853|ENST00000318121|CLSPN;;nc|ENSG00000092853|Q9HAW4-2|CLSPN;;nc|ENSG00000092853|Q9HAW4-3|CLSPN -0.4577325582504272 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4590 24.183 800.0 308860.0 25 0 14546.0 + + 40059 QENLKPKQF 9 189 377.8568468484646 0 377.8569824099541 PEAK CID FTMS 0 0 0 4584 117521.46875 1.0 0 0.0 6 Unmodified _VGGQENRLQM_ nc|ENSG00000120899|Q14289-2|PTK2B;ENSG00000120899|ENST00000346049|PTK2B 21.53697664764585 0.2858915239208219 1 E 1 -1 8.2268 0.0 0.0 1.0915 0.0 0.0 541.6192895447824 80.0148180597289 621.6341076045113 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 E 1.0915 + + 92 + 1 2.259 194725.7 0.5699999928474426 1365 3223 4584 DOHH2_400M_050219_1,4590 DOHH2_400M_050219_1,4590,VGGQENRLQM False False QENLKPKQF 24.182502 377.856982409954 1387507.0 4584.0 nc|ENSG00000120899|Q14289-2|PTK2B;;ENSG00000120899|ENST00000346049|PTK2B 1.9817594488461807 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4591 24.196 783.0 145980.0 25 0 8536.2 + 8008 EMLTKKSTL 9 131 525.7960659705758 1049.5775790079515 2 525.7958862185478 MULTI CID FTMS 0 0 0 4584 256261.1875 1.0 0 0.0 7 Unmodified _EMLTKKSTL_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 67.83816525789305 0.0219346420158844 1 EM{I|L}TKKST{I|L} 9 0 + 84.659 0.0 0.0 8.066 8.066 94.07 0.0 0.0 0.0 34.973024840566474 10.07568498303604 10.07568498303604 10.07568498303604 0 1.1677353201839438 2.0 1.584878496053758 0.0 + + EM{I|L}TKKST{I|L};EM{I|L}TKKS{I|L}T;{[YD]|[{M(Oxidation (M))|F}M]}[VP]KKST{I|L};EM[YR]KK[VP];[KT]KST{[QG]|[NA]}ST{I|L};{[YD]|[{M(Oxidation (M))|F}M]}[VP]KKS{I|L}T;[YR][WP][KS]T{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}TK{[QG]|[NA]}{I|L};E[YV]{I|L}TK{[QG]|[NA]}{I|L};E[YV]T{I|L}K{[QG]|[NA]}{I|L} 8.066;7.106;1.947;1.9266;1.14;0.98706;0.9549;0.91272;0.91272;0.85746 +;-;-;-;-;-;-;-;-;- + 662 + 1 2.259 90078.6 1.0 1366 3223 4584 DOHH2_400M_050219_1,4591 DOHH2_400M_050219_1,4591,EMLTKKSTL True True EMLTKKSTL 24.196045 525.795886218548 1002632.8125 4584.0 ENST00000470585.5_1_1:38445118-38455637:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 4.563319683074951 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4592 24.201 240.0 395370.0 25 0 69751.0 + + 38507 TSSAVTTALK 10 140 490.28004500621154 978.5455370792232 2 490.2834960818291 MULTI CID FTMS 0 0 0 4584 245759.78125 0.6893548959123426 -8 0.3212871551513672 8 Unmodified _TSLAVRLGY_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 16.942295170755138 0.3780752226737986 1 SAVTTA{I|L}K 8 -1 34.237 0.0 0.0 3.4988 0.0 0.0 189.08546735441683 0.0 189.08546735441683 0.0 19.532260566376102 0.0 0.0 0 0.2059771852360797 0.0 0.3807196863200844 0.1050541008457974 SAVTTA{I|L}K 3.4988 - 130 + 1 2.259 79736.9 1.0 1367 3223 4584 DOHH2_400M_050219_1,4592 DOHH2_400M_050219_1,4592,TSLAVRLGY False False TSSAVTTALK 24.200522 490.283496081829 1586947.375 4584.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 6.300766309102376 2.0 False 10.0 True splicing PXD020620_cell_line DOHH2_400M_050219_1 4593 24.211 553.0 305040.0 25 0 21309.0 + 2535 ASEASRLAHY 10 176 368.8535392646841 1103.5387883942524 3 368.8522521853447 MULTI CID FTMS 0 0 0 4584 160469.171875 1.0 0 0.0 9 Unmodified _ASEASRLAHY_ ENSG00000146047|ENST00000274764|H2BC1;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENST00000436555.1_1_1:228651947-228652295:-|nuORF 55.50274090549119 0.048383292844968 1 ASEASR{I|L}AHY 10 0 + 57.508 0.0 0.0 5.2112 5.2112 82.392 0.0 0.0 0.0 41.54376749439878 3.804651147624085 3.804651147624085 7.132104434506289 0 0.718765315847925 1.3979400086720375 0.4247425010840047 0.2742275032520141 + + ASEASR{I|L}AHY;ASEASR{I|L}AYH;ASEAS[VG]{I|L}AHY;ASE[WK]{I|L}AHY;ASEAS[VG]{I|L}AYH;ASEASR[C(Carbamidomethyl (C))K]VP;ASEA[KQ]WWV;ASE[WK]{I|L}AYH;ASEASR[C(Carbamidomethyl (C))K]PV;AS{[WT]|[RM]}R{I|L}AHY 5.2112;4.5649;4.1322;3.983;3.4859;3.3505;3.3404;3.3367;3.2544;3.2172 +;-;-;-;-;-;-;-;-;- + 741 + 1 2.259 134105.4 1.0 1368 3223 4584 DOHH2_400M_050219_1,4593 DOHH2_400M_050219_1,4593,ASEASRLAHY True True ASEASRLAHY 24.211393 368.852252185345 1212378.0 4584.0 ENSG00000185130|ENST00000377401|H2BC13;;ENSG00000146047|ENST00000274764|H2BC1;;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;;ENSG00000196890|ENST00000693095|H2BC26 5.059048016866048 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4594 24.225 800.0 74789.0 25 0 12045.0 -1 0 74 1040.9682157158422 0 1040.968798816204 PEAK CID FTMS 0 0 0 4584 134270.390625 1.0 0 0.0 10 1 KQ{[ES]|[DT]|[{I|L}C]}{[CA]|SS}HGWTG 11 -1 59.786 0.0 0.0 2.8744 0.0 0.0 535.2310348478971 357.14216028385005 892.3731951317473 0.0 0.0 0.0 0.0 0 4.186181873724173 0.0 0.4247425010840047 0.4247425010840047 KQ{[ES]|[DT]|[{I|L}C]}{[CA]|SS}HGWTG 2.8744 - 225 + 1 2.259 46015.0 0.4799999892711639 1369 3223 4584 DOHH2_400M_050219_1,4594 DOHH2_400M_050219_1,4594, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4595 24.233 452.0 283180.0 25 0 20883.0 + -1 GEEGSARMW 9 145 519.7187878840913 1037.4230228349825 2 519.7184936404228 MULTI CID FTMS 0 0 0 4584 126274.03125 0.8336177374948386 -2 0.1034278869628906 11 Oxidation (M) _GEEGSARM(Oxidation (M))W_ ENST00000550009.1_1_12:120875908-120876378:+|nuORF;ENSG00000111775|ENST00000229379|COX6A1 28.49450938151212 0.1686335738423394 1 {[DA]|[EG]}EGSA 6 -1 47.708 0.0 0.0 4.5987 0.0 0.0 0.0 504.20548766045806 504.20548766045806 25.757659435244733 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3807196863200844 0.0 {[DA]|[EG]}EGSA 4.5987 + + 265 + 1 2.259 100671.9 1.0 1370 3223 4584 DOHH2_400M_050219_1,4595 DOHH2_400M_050219_1,4595,GEEGSARMW False False GEEGSARMW 24.233293 519.718493640423 1152294.5 4584.0 ENST00000550009.1_1_12:120875908-120876378:+|nuORF;;ENSG00000111775|ENST00000229379|COX6A1 5.68961222966512 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4597 24.241 192.0 219940.0 25 0 14864.0 -1 0 56 694.3147114225866 2079.92230486796 3 694.3146850466728 MULTI CID FTMS 0 0 0 4596 269160.90625 0.473132129955332 1 -0.0391044616699218 1 1 WTG[PS]{[SA]|[TG]} 7 -1 29.213 0.0 0.0 1.4045 0.0 0.0 1375.6086626662916 0.0 1375.6086626662916 0.0 20.36130090914305 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.0 WTG[PS]{[SA]|[TG]} 1.4045 - 125 1 2.252 38702.0 1.0 1371 3224 4596 DOHH2_400M_050219_1,4597 DOHH2_400M_050219_1,4597, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4598 24.244 154.0 424650.0 25 0 29335.0 + 10645 FVQLCPYKGQG 11 85 620.3130774713335 1238.6116020094669 2 620.3124877810478 MULTI CID FTMS 0 0 0 4596 353945.4375 0.6204253965325539 4 -0.1237468719482421 2 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 16.149105407346934 0.6992268271266642 1 {[HG]|PP}AMPPPPPPQN 12 -1 {[HG]|PP}AM + + 70.629 9.2082 2.3242 5.7023 5.7023 59.179 0.0 0.0 0.0 0.0 54.29850893802346 0.0 0.0 0 2.3494850021680094 0.0 0.0 1.4049471895720984 {[HG]|PP}AMPPPPPPQN 5.7023 - 1017 + 1 2.252 53965.8 1.0 1372 3224 4596 DOHH2_400M_050219_1,4598 DOHH2_400M_050219_1,4598,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4599 24.253 507.0 158970.0 25 0 14128.0 + -1 EKSLSQGMHH 10 95 585.2707534210987 1168.5269539089973 2 585.2724487185478 MULTI CID FTMS 0 0 0 4596 133185.546875 0.1690841519012089 3 -0.098459243774414 3 Oxidation (M) _EKSLSQGM(Oxidation (M))HH_ REV__ENST00000526769.3_1_11:6735844-6741409:-|nuORF;REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1 12.240655878213236 0.6421556946785427 1 KE{NN|[MP]|[D{I|L}]|[EV]}KMSS 8 -1 31.936 0.0 0.0 2.733 0.0 0.0 97.97192610522764 149.07200037174064 247.0439264769683 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7769763493273799 0.4247425010840047 KE{NN|[MP]|[D{I|L}]|[EV]}KMSS 2.733 - 399 + 1 2.252 65378.1 1.0 1373 3224 4596 DOHH2_400M_050219_1,4599 DOHH2_400M_050219_1,4599,EKSLSQGMHH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4600 24.267 800.0 138120.0 25 0 10848.0 + 31415 RPKIQQQF 8 157 522.8005263284992 1043.5864997237984 2 522.8015624880791 MULTI CID FTMS 0 0 0 4596 97076.6328125 1.0 0 0.0 4 Unmodified _RPKIQQQF_ ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6 67.34385681178166 0.1158486345035644 1 [RP]K{I|L}QQQ{M(Oxidation (M))|F} 8 0 + 52.3 0.0 0.0 5.0115 5.0115 85.352 0.0 0.0 0.0 3.367421011425193 29.05024486769144 3.367421011425193 9.262137858390815 0 0.6549471895720984 0.0 0.0 1.305462187404089 + + [RP]K{I|L}QQQ{M(Oxidation (M))|F};[RP]K{I|L}[AG]QQ{M(Oxidation (M))|F};[RP]K{I|L}Q[AG]Q{M(Oxidation (M))|F};[RP]K{I|L}QQ[AG]{M(Oxidation (M))|F};[RP]K{I|L}[AG][AG]Q{M(Oxidation (M))|F};[RP]K{I|L}[AG]Q[AG]{M(Oxidation (M))|F};[RP]K{I|L}Q[AG][AG]{M(Oxidation (M))|F};[VG][PG]Q{I|L}[KA]Q{M(Oxidation (M))|F};[VG]A[NP]{I|L}[KA]Q{M(Oxidation (M))|F};[VG][PG]Q{I|L}[KA]{M(Oxidation (M))|F}Q 5.0115;4.124;4.124;4.124;3.2416;3.2416;3.2416;3.154;2.6297;2.2459 +;-;-;-;-;-;-;-;-;- + 773 1 2.252 88776.9 0.5 1374 3224 4596 DOHH2_400M_050219_1,4600 DOHH2_400M_050219_1,4600,RPKIQQQF True True RPKIQQQF 24.266506 522.801562488079 465696.4375 4596.0 nc|ENSG00000101161|O94906-2|PRPF6;;ENSG00000101161|ENST00000266079|PRPF6 3.5400866667429605 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4601 24.268 36.0 1756600.0 25 0 215200.0 + 2448 AQVAFEQLK 9 76 517.2852793069982 1032.5560056807965 2 517.2852050662041 MULTI CID FTMS 0 0 0 4596 1836277.0 0.8785196784318398 -10 0.4730720520019531 5 Unmodified _AQVAFEQLK_ REV__ENSG00000166762|ENST00000396879|CATSPER2;REV__nc|ENSG00000166762|Q96P56-2|CATSPER2 1.6526216038709556 0.8569919814334629 1 H 1 -1 9.5329 0.0 0.0 0.92323 0.0 0.0 877.4892159852869 0.0 877.4892159852869 0.0 9.532891574188822 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.92323 - 3 + 1 2.252 54023.2 1.0 1375 3224 4596 DOHH2_400M_050219_1,4601 DOHH2_400M_050219_1,4601,AQVAFEQLK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4602 24.272 248.0 305100.0 25 0 48840.0 + 6843 EEDKLQLE 8 106 502.2488598364771 0 502.2489807009697 PEAK CID FTMS 0 0 0 4596 185324.59375 0.9808756613655976 7 -0.1703624725341797 6 Unmodified _EEDKLQLE_ REV__ENSG00000138430|ENST00000284719|OLA1;REV__nc|ENSG00000138430|Q9NTK5-3|OLA1 15.847184025352805 0.4758297917908462 1 CH{I|L} 3 -1 11.682 0.0 0.0 1.1654 0.0 0.0 147.0629933271577 499.21921716861567 646.2822104957734 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 CH{I|L} 1.1654 - 21 + 1 2.252 65747.7 1.0 1376 3224 4596 DOHH2_400M_050219_1,4602 DOHH2_400M_050219_1,4602,EEDKLQLE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4604 24.277 50.0 1398200.0 25 0 78276.0 + 8001 EMKEKKPEM 9 80 383.86051664516833 1148.559720535705 3 383.8605224490166 MULTI CID FTMS 0 0 0 4603 926322.4375 0.3772344301665393 2 -0.0593547821044921 1 Unmodified _EMKEKKPEM_ REV__ENSG00000102755|ENST00000282397|FLT1;REV__nc|ENSG00000102755|P17948-5|FLT1;REV__nc|ENSG00000102755|P17948-6|FLT1 18.1463463914782 0.3454829746528889 1 EM 2 -1 24.706 0.0 0.0 2.1511 0.0 0.0 870.4651920191983 0.0 870.4651920191983 0.0 12.71652514092061 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 EM 2.1511 + + 32 1 2.252 59082.4 1.0 1377 3225 4603 DOHH2_400M_050219_1,4604 DOHH2_400M_050219_1,4604,EMKEKKPEM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4605 24.279 97.0 675770.0 25 0 161930.0 + 8512 ETDRRTLQM 9 62 575.2865113076895 1148.5584696821788 2 575.2873412966728 MULTI CID FTMS 0 0 0 4603 537926.1875 0.3707113603993205 2 -0.0593547821044921 2 Unmodified _ETDRRTLQM_ ENSG00000186010|ENST00000507754|NDUFA13;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13 13.042465956692816 0.4836390050082244 1 QM 2 7 20.049 0.0 0.0 1.7456 0.0 0.0 871.4484976136226 0.0 871.4484976136226 0.0 20.049406363485858 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.5 + QM 1.7456 + + 21 + 1 2.252 56910.9 1.0 1378 3225 4603 DOHH2_400M_050219_1,4605 DOHH2_400M_050219_1,4605,ETDRRTLQM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4606 24.284 248.0 250960.0 25 0 14165.0 + 40189 VGPTTGRPQL 10 101 513.2897994321389 1024.5650459310775 2 513.2899658083916 MULTI CID FTMS 0 0 0 4603 212305.90625 0.2393390921643358 2 -0.0593547821044921 3 Unmodified _VGPTTGRPQL_ REV__ENST00000576886.5_1_16:2834849-2835800:-|nuORF 26.268140514670165 0.3785003716575977 1 [VG]PTGA 6 -1 53.377 0.0 0.0 5.2097 0.0 0.0 0.0 539.2937105768186 539.2937105768186 40.90288749933073 0.0 0.0 0.0 0 1.0356668758921828 2.0 0.0 0.0 [VG]PTGA 5.2097 - 174 + 1 2.252 52351.6 1.0 1379 3225 4603 DOHH2_400M_050219_1,4606 DOHH2_400M_050219_1,4606,VGPTTGRPQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4607 24.29 372.0 281510.0 25 0 102540.0 -1 0 85 539.2674489508149 538.2601724842149 1 539.2695190310478 MULTI CID FTMS 0 0 0 4603 137547.65625 0.3689612435721348 -29 0.9183979034423828 4 1 KAY 3 -1 23.812 0.0 0.0 4.4239 0.0 0.0 158.05431418518987 0.0 158.05431418518987 0.0 17.245462655597095 0.0 0.0 0 0.0 0.0 0.0 0.0 KAY 4.4239 - 37 + 1 2.252 83262.7 1.0 1380 3225 4603 DOHH2_400M_050219_1,4607 DOHH2_400M_050219_1,4607, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4609 24.303 604.0 313180.0 25 0 27255.0 + 14713 IKEHYLLY 8 217 360.2012594483224 0 360.2006408572197 PEAK CID FTMS 0 0 0 4608 125814.625 1.0 0 0.0 1 Unmodified _IKEHYLLY_ REV__ENSG00000163214|ENST00000457308|DHX57 5.760428011301431 0.5786759180849727 1 VA{M(Oxidation (M))|F} 3 -1 9.0411 0.0 0.0 1.2585 0.0 0.0 152.10445233215972 246.07512578275987 398.1795781149196 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA{M(Oxidation (M))|F} 1.2585 - 23 + 1 2.252 153622.5 1.0 1381 3226 4608 DOHH2_400M_050219_1,4609 DOHH2_400M_050219_1,4609,IKEHYLLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4610 24.31 369.0 200300.0 25 0 17086.0 + 26094 NPHVPSTRL 9 111 510.7825830636592 1019.5506131941185 2 510.7823974490166 MULTI CID FTMS 0 0 0 4608 123930.828125 0.6435594061570985 -2 0.0572261810302734 2 Unmodified _NPHVPSTRL_ REV__ENSG00000174137|ENST00000308132|FAM53A;REV__ENST00000489363.5_2_4:1643022-1645966:-|nuORF 24.020572477871973 0.2255576514309169 1 NP{I|L}W[YK]S{I|L} 8 -1 + 58.463 0.0 0.0 5.7341 5.7341 81.93 0.0 0.0 0.0 39.01207210215268 8.43830988981626 8.43830988981626 4.45931800153943 0 0.2215141619232908 0.958607314841775 0.8494850021680094 0.3252574989159953 NP{I|L}W[YK]S{I|L};NPHTR[VP]S{I|L};[WR][PA][YK]S{I|L};[WR][YK][PA]S{I|L} 5.7341;5.2968;1.1281;0.34109 -;-;-;- 244 + 1 2.252 65205.2 1.0 1382 3226 4608 DOHH2_400M_050219_1,4610 DOHH2_400M_050219_1,4610,NPHVPSTRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4611 24.317 369.0 248400.0 25 0 22162.0 + 6591 EAPPIGEPP 9 136 453.7337204448337 905.4528879564674 2 453.7331725955009 MULTI CID FTMS 0 0 0 4608 119673.03125 0.4998265079079699 -8 0.391275405883789 3 Unmodified _EAPPIGEPP_ REV__ENSG00000113763|ENST00000329542|UNC5A;REV__nc|ENSG00000113763|Q6ZN44-2|UNC5A;REV__nc|ENSG00000113763|Q6ZN44-3|UNC5A 16.942295170755138 0.3780752226737986 1 {[CP]|[EA]}TP{I|L}T{M(Oxidation (M))|F}K 8 -1 {[CP]|[EA]}T + + 24.268 10.062 3.3413 2.6802 2.6802 49.798 0.0 0.0 0.0 0.0 7.712983648652397 0.0 0.0 0 0.3807196863200844 0.0 0.3054621874040891 0.0519020776254365 {[CP]|[EA]}TP{I|L}T{M(Oxidation (M))|F}K 2.6802 - 102 + 1 2.252 74267.4 1.0 1383 3226 4608 DOHH2_400M_050219_1,4611 DOHH2_400M_050219_1,4611,EAPPIGEPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4612 24.33 800.0 187700.0 25 0 8499.4 + 26091 ITHDMTPKAFLERY 14 158 436.2004941694348 870.3864354056697 2 436.1996948122978 MULTI CID FTMS 0 0 0 4608 88042.7109375 0.6804197452537724 -1 0.0181217193603515 4 Unmodified _NPGNAQAAE_ ENSG00000162738|ENST00000368061|VANGL2 10.823927491677226 0.5436922275383211 1 {M(Oxidation (M))|F}EQERY 6 8 + 31.634 0.0 0.0 3.6345 3.6345 78.142 0.0 0.0 0.0 8.665827977365623 8.87295719808711 8.665827977365623 8.87295719808711 0 0.218765315847925 0.0 0.2887254899964357 0.2614393726401688 {M(Oxidation (M))|F}EQERY;{M(Oxidation (M))|F}EQEYR;{M(Oxidation (M))|F}EQYER;[{I|L}T]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;{[RE]|[WV]}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;{M(Oxidation (M))|F}EQ[HD]VP;{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WM]{I|L} 3.6345;2.6151;1.9379;1.0618;0.83128;0.41838;0.11522 -;-;-;-;-;-;- 152 + 1 2.252 117858.9 0.4099999964237213 1384 3226 4608 DOHH2_400M_050219_1,4612 DOHH2_400M_050219_1,4612,NPGNAQAAE False False ITHDMTPKAFLERY 24.33047 436.199694812298 2056913.125 4608.0 ENSG00000162738|ENST00000368061|VANGL2 -0.3070057580868403 4.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4613 24.332 23.0 2748700.0 25 0 165550.0 + 32677 SDGTCKCGLEC 11 100 372.4755631997637 1114.4048601994912 3 372.8095580935478 MULTI CID FTMS 0 0 0 4608 1179347.75 0.7681760473835938 -1 0.0181217193603515 5 Unmodified _SDGTCKCGLEC_ ENSG00000166987|ENST00000355673|MBD6 5.731851221503515 0.8481046878870278 1 CTT{I|L}HY 6 9 36.824 0.0 0.0 3.3044 0.0 0.0 378.0873075645287 0.0 378.0873075645287 0.0 17.13171349189313 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 CTT{I|L}HY 3.3044 - 145 + 1 2.252 58182.4 1.0 1385 3226 4608 DOHH2_400M_050219_1,4613 DOHH2_400M_050219_1,4613,SDGTCKCGLEC False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4615 24.339 290.0 312340.0 25 0 29545.0 -1 0 97 578.3382450194333 577.3309685528333 1 578.3380004763603 MULTI CID FTMS 0 0 0 4614 330945.0 0.1406654154856707 -70 2.339019775390625 1 1 Y 1 -1 11.42 0.0 0.0 1.9781 0.0 0.0 396.2567325682614 0.0 396.2567325682614 0.0 7.925133260145909 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.9781 - 5 + 1 2.252 74486.8 1.0 1386 3227 4614 DOHH2_400M_050219_1,4615 DOHH2_400M_050219_1,4615, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4616 24.341 32.0 1807200.0 25 0 139630.0 + 42412 VTEIDQDKY 9 91 555.7694163962642 1109.5242798593283 2 555.7693969607353 MULTI CID FTMS 0 0 0 4614 1812709.375 0.2137512525850596 -7 0.3525428771972656 2 Unmodified _VTEIDQDKY_ ENSG00000196924|ENST00000369850|FLNA;nc|ENSG00000196924|P21333-2|FLNA 79.59630418116434 0.0176145593575188 1 VTE{I|L}DQDKY 9 0 + 102.75 0.0 0.0 9.2607 9.2607 93.918 0.0 0.0 0.0 83.76561777552956 11.962724883926654 11.962724883926654 9.208187539523747 0 0.805462187404089 2.0 0.7134679910804405 0.9247425010840048 + + VTE{I|L}DQDKY;VTE{I|L}D[AG]DKY;VTE{I|L}YY[WH];VTE[QP][EP]V[DP];VT[RN][Y{M(Oxidation (M))|F}]V[DP];VTE[QP][EP]D[VP];VT[RN][Y{M(Oxidation (M))|F}]D[VP] 9.2607;8.4308;5.1639;4.9174;4.7281;4.1824;3.9931 +;-;-;-;-;-;- + 544 + 1 2.252 54945.8 1.0 1387 3227 4614 DOHH2_400M_050219_1,4616 DOHH2_400M_050219_1,4616,VTEIDQDKY True True VTEIDQDKY 24.340565 555.769396960735 73161856.0 4614.0 ENSG00000196924|ENST00000369850|FLNA;;nc|ENSG00000196924|P21333-2|FLNA 7.1161885261535645 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4617 24.343 124.0 392390.0 25 0 32920.0 + 33089 SESAQSKML 9 92 490.7392381920991 979.4639234509982 2 490.7391845583916 MULTI CID FTMS 0 0 0 4614 184461.03125 0.922169856641346 -2 0.0593547821044921 3 Unmodified _SESAQSKML_ ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000196126|ENST00000360004|HLA-DRB1;ENSG00000198502|ENST00000374975|HLA-DRB5;ENSG00000232629|ENST00000437316|HLA-DQB2;ENST00000487676.1_1_6:32628015-32629319:-|nuORF;nc|ENSG00000179344|P01920|HLA-DQB1;nc|ENSG00000232629|P05538|HLA-DQB2 34.40172386719151 0.1061884637610825 1 {[ES]|[DT]|[{I|L}C]}SAQSKM{I|L} 9 0 + 19.838 0.0 0.0 2.0254 2.0254 77.228 0.0 0.0 0.0 -4.512611925321163 6.7443545199346335 -4.512611925321163 9.208187539523754 0 0.6069758080123702 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}SAQSKM{I|L};{[ES]|[DT]|[{I|L}C]}SA[AG]SKM{I|L};{[ES]|[DT]|[{I|L}C]}HH[RV]C{I|L} 2.0254;1.0853;0.93337 +;-;- + 143 + 1 2.252 45795.6 1.0 1388 3227 4614 DOHH2_400M_050219_1,4617 DOHH2_400M_050219_1,4617,SESAQSKML True True SESAQSKML 24.34312 490.739184558392 1119496.0 4614.0 chr6:32580856-32581486|15|16.33|0.87|4.23|-|2|HLA-DRB1,None|3;;ENSG00000196126|ENST00000360004|HLA-DRB1;;ENSG00000179344|ENST00000434651|HLA-DQB1;;nc|ENSG00000232629|P05538|HLA-DQB2;;nc|ENSG00000179344|P01920|HLA-DQB1;;ENSG00000198502|ENST00000374975|HLA-DRB5;;ENSG00000232629|ENST00000437316|HLA-DQB2;;ENST00000487676.1_1_6:32628015-32629319:-|nuORF 3.503005544344584 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4618 24.357 800.0 27116.0 25 0 4477.3 -1 0 33 1066.759054637169 3197.2553345117067 3 1067.416430652142 MULTI CID FTMS 0 0 0 4614 48807.70703125 0.6614002651154277 3 -0.067911148071289 4 1 A 1 -1 5.4846 0.0 0.0 0.17154 0.0 0.0 2059.739051407995 1063.4817598932252 3123.22081130122 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.17154 - 1 + 1 2.252 27164.1 0.3899999856948852 1389 3227 4614 DOHH2_400M_050219_1,4618 DOHH2_400M_050219_1,4618, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4621 24.369 236.0 354970.0 25 0 19964.0 34297 SLRGIRVAE 9 106 500.79666555504247 999.578778176885 2 500.7966186404228 MULTI CID FTMS 0 0 0 4620 159077.609375 0.503275677325936 -3 0.0704879760742187 1 Unmodified _SLRGIRVAE_ ENSG00000074276|ENST00000261944|CDHR2 12.240655878213236 0.5053430591993562 1 GPMVKV[W{I|L}] 8 8 19.563 0.0 0.0 1.9571 0.0 0.0 71.07425887275546 0.0 71.07425887275546 0.0 0.2280443314668154 0.0 0.0 0 0.0 0.0 0.0 0.0 GPMVKV[W{I|L}] 1.9571 - 250 1 2.25 67830.2 1.0 1390 3229 4620 DOHH2_400M_050219_1,4621 DOHH2_400M_050219_1,4621,SLRGIRVAE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4622 24.383 800.0 103210.0 25 0 21339.0 -1 DKSFQYHLHHM 11 91 729.8336271608207 1457.6527013884413 2 730.3355590701103 MULTI CID FTMS 0 0 0 4620 83322.3359375 0.2061452762971586 5 -0.1048088073730468 2 Oxidation (M) _DKSFQYHLHHM(Oxidation (M))_ ENST00000239938.4_1_5:137804049-137804256:+|nuORF 2.9952420565917617 0.861016188266951 1 [EP]A 3 -1 24.181 0.0 0.0 1.6589 0.0 0.0 0.0 1157.4981047910385 1157.4981047910385 11.417002536801313 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [EP]A 1.6589 - 464 1 2.25 63509.4 0.6600000262260437 1391 3229 4620 DOHH2_400M_050219_1,4622 DOHH2_400M_050219_1,4622,DKSFQYHLHHM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4623 24.386 145.0 447990.0 25 0 37458.0 -1 0 94 501.2195135963489 500.2122371297489 1 501.2191650271416 MULTI CID FTMS 0 0 0 4620 157368.4375 0.779149727460286 -5 0.1277141571044922 3 1 EE 2 -1 27.286 0.0 0.0 5.455 0.0 0.0 224.1164862525989 0.0 224.1164862525989 0.0 17.53250978080541 0.0 0.0 0 0.8807196863200843 0.0 0.5916328861051033 0.0 EE 5.455 - 26 + 1 2.25 52682.0 1.0 1392 3229 4620 DOHH2_400M_050219_1,4623 DOHH2_400M_050219_1,4623, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4624 24.4 800.0 304220.0 25 0 20200.0 + 32937 SELGSETRY 9 196 521.246368138595 1040.47818334399 2 521.2454711794853 MULTI CID FTMS 0 0 0 4620 91422.0859375 0.2402520945327191 -5 0.1277141571044922 4 Unmodified _SELGSETRY_ ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1 36.506200033944 0.094635877243972 1 {[ES]|[DT]|[{I|L}C]}{I|L}GS[W{I|L}]SY 9 3 + 45.128 0.0 0.0 4.3373 4.3373 76.425 0.0 0.0 0.0 29.555227896979588 2.812181046590382 2.812181046590382 3.979400086720375 0 0.7742275032520141 0.0 0.805462187404089 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}GS[W{I|L}]SY;{[ES]|[DT]|[{I|L}C]}{I|L}G{[ET]|[MV]}RSY;{[ES]|[DT]|[{I|L}C]}{I|L}GS[DV][TA]Y;{[ES]|[DT]|[{I|L}C]}{I|L}G{[ET]|[MV]}A[TA]Y;{[ES]|[DT]|[{I|L}C]}{I|L}GSE[HV]SP;{[ES]|[DT]|[{I|L}C]}{I|L}G{[ET]|[MV]}[VG]SY;{[ES]|[DT]|[{I|L}C]}{I|L}GSE[HS]VP;{[ES]|[DT]|[{I|L}C]}{I|L}{[WT]|[RM]}A[TA]Y;{[ES]|[DT]|[{I|L}C]}{I|L}GS[DV][YT]A;{[ES]|[DT]|[{I|L}C]}{I|L}{[WT]|[RM]}[VG]SY 4.3373;3.9548;3.9108;3.5284;3.3491;3.0698;2.9845;2.9006;2.5902;2.442 -;-;-;-;-;-;-;-;-;- 818 + 1 2.25 186073.2 0.6499999761581421 1393 3229 4620 DOHH2_400M_050219_1,4624 DOHH2_400M_050219_1,4624,SELGSETRY True True SELGSETRY 24.39963 521.245471179485 1609117.875 4620.0 nc|ENSG00000163374|Q9H869-6|YY1AP1;;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;;nc|ENSG00000163374|Q9H869-8|YY1AP1;;nc|ENSG00000163374|Q9H869|YY1AP1;;nc|ENSG00000163374|Q9H869-9|YY1AP1;;ENSG00000163374|ENST00000355499|YY1AP1;;nc|ENSG00000163374|Q9H869-4|YY1AP1;;nc|ENSG00000163374|Q9H869-7|YY1AP1;;nc|ENSG00000163374|Q9H869-5|YY1AP1;;nc|ENSG00000163374|Q9H869-3|YY1AP1;;ENST00000442834.6_1_1:155629450-155640310:-|nuORF 5.710216522216797 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4627 24.408 16.0 1970000.0 25 0 204010.0 + -1 SGDVMVCCTS 10 65 558.2094601214503 1114.4043673097003 2 558.2099487185478 MULTI CID FTMS 0 0 0 4626 2424434.25 0.5549341322587301 4 -0.0659084320068359 1 2 Carbamidomethyl (C) _SGDVMVC(Carbamidomethyl (C))C(Carbamidomethyl (C))TS_ REV__ENSG00000030582|ENST00000053867|GRN;REV__nc|ENSG00000030582|P28799-2|GRN 24.020572477871973 0.4289996903560794 1 TT{I|L}HY 5 -1 33.188 0.0 0.0 2.9781 0.0 0.0 481.0943219989568 0.0 481.0943219989568 0.0 0.7672878367107216 0.0 0.0 0 0.0 0.0 0.0 0.0 TT{I|L}HY 2.9781 - 68 + 1 2.25 31011.1 1.0 1394 3231 4626 DOHH2_400M_050219_1,4627 DOHH2_400M_050219_1,4627,SGDVMVCCTS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4628 24.411 154.0 427050.0 25 0 66413.0 + 24682 MMDPNSTQRY 10 74 621.7654073089132 1241.5162616846262 2 621.7654296755791 MULTI CID FTMS 0 0 0 4626 361602.875 0.0840434417003229 -6 0.1312580108642578 2 Unmodified _MMDPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 57.24910588100465 0.0438022649904578 1 MMDPNSTQ[YR] 10 0 + 98.722 0.0 0.0 7.9517 7.9517 91.517 0.0 0.0 0.0 78.0866814795592 5.764837301042718 5.764837301042718 9.164539485499247 0 0.9247425010840048 1.6989700043360187 0.3807196863200844 1.2302046884880935 + + MMDPNSTQ[YR];MMDPNST[AG][YR];MMDPGGSTQ[YR];MMDPGGST[AG][YR];MMDPN[C(Carbamidomethyl (C))R][YR];MMDPGG[C(Carbamidomethyl (C))R][YR];MMYYSTQ[YR];MMYYST[AG][YR];MMYY[C(Carbamidomethyl (C))R][YR];[QP][C(Carbamidomethyl (C))H]VEPD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 7.9517;7.2135;7.2135;6.4782;6.2354;5.4937;4.7996;4.0579;3.3942;0.26668 +;-;-;-;-;-;-;-;-;- + 334 + 1 2.25 52025.6 1.0 1395 3231 4626 DOHH2_400M_050219_1,4628 DOHH2_400M_050219_1,4628,MMDPNSTQRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4629 24.418 345.0 348320.0 25 0 44895.0 23209 LSSNKDVGI 9 144 466.75605363784086 931.4975543424816 2 466.7563964724541 MULTI CID FTMS 0 0 0 4626 178779.953125 0.5652640126171083 6 -0.1827583312988281 3 Unmodified _LSSNKDVGI_ ENSG00000161904|ENST00000293760|LEMD2;ENST00000511171.5_1_6:33747875-33748949:-|nuORF;ENST00000514636.1_1_6:33747875-33752267:-|nuORF;nc|ENSG00000161904|Q8NC56-2|LEMD2 43.85829265575387 0.0542763391141878 1 {[TV]|[{I|L}S]}NSKDVG{I|L} 9 2 + 56.04 0.0 0.0 6.0162 6.0162 82.495 0.0 0.0 0.0 26.55410404594221 10.985994592184554 10.985994592184554 3.979400086720375 0 0.4247425010840047 2.0 0.2614393726401688 0.3807196863200844 {[TV]|[{I|L}S]}NSKDVG{I|L};{[TV]|[{I|L}S]}SNKDVG{I|L};{[TV]|[{I|L}S]}NSK[PS]S{I|L};{[TV]|[{I|L}S]}GGSKDVG{I|L};{[TV]|[{I|L}S]}NSDKVG{I|L};{[TV]|[{I|L}S]}SNK[PS]S{I|L};{[TV]|[{I|L}S]}SGGKDVG{I|L};{[TV]|[{I|L}S]}SNDKVG{I|L};{[TV]|[{I|L}S]}GGSK[PS]S{I|L};{[TV]|[{I|L}S]}GGSDKVG{I|L} 6.0162;5.589;5.3437;5.0276;4.9851;4.9165;4.6004;4.5579;4.3552;3.9966 -;+;-;-;-;-;-;-;-;- + 734 + 1 2.25 96387.8 1.0 1396 3231 4626 DOHH2_400M_050219_1,4629 DOHH2_400M_050219_1,4629,LSSNKDVGI True False SLNSKPSSL 24.417505 466.756396472454 2480088.75 4626.0 nc|ENSG00000118308|Q12912|IRAG2;;ENSG00000118308|ENST00000556887|IRAG2;;chr12:25052956-25063720|41|17.37|0.82|4.41|+|ENST00000547044|IRAG2,IRAG2 3.8113745848337808 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4631 24.431 650.0 229430.0 25 0 20646.0 + 34483 SMLKHQTL 8 151 479.26323780394256 956.5119226746853 2 479.2634460330009 MULTI CID FTMS 0 0 0 4630 168886.890625 0.4848430816803492 -3 0.0565814971923828 1 Unmodified _SMLKHQTL_ ENSG00000105364|ENST00000253099|MRPL4 79.59630418116434 0.0936370603175206 1 SM{I|L}KQHT{I|L} 8 2 + 76.757 0.0 0.0 8.0246 8.0246 93.687 0.0 0.0 0.0 52.42346229171528 13.399480616943508 13.399480616943508 9.262137858390815 0 1.674742501084005 1.6989700043360187 1.024227503252014 0.3494850021680094 SM{I|L}KQHT{I|L};SM{I|L}K[AG]HT{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}KHQT{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}KH[AG]T{I|L};{I|L}SMKQHT{I|L};SM{I|L}K[WP]PV;SM{I|L}K[WP]VP;{I|L}SMK[AG]HT{I|L};{[TV]|[{I|L}S]}MKHQT{I|L};[PS]{M(Oxidation (M))|F}KHQT{I|L} 8.0246;7.0563;5.707;4.7387;4.5693;3.9789;3.9155;3.601;3.2425;2.9138 -;-;+;-;-;-;-;-;-;- + 797 + 1 2.25 113141.9 1.0 1397 3232 4630 DOHH2_400M_050219_1,4631 DOHH2_400M_050219_1,4631,SMLKHQTL True True SMLKHQTL 24.431205 479.263446033001 1446542.0 4630.0 ENSG00000105364|ENST00000253099|MRPL4 4.097646951675415 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4632 24.432 14.0 7083100.0 25 0 611390.0 + 7177 EEPTVIKKY 9 98 369.5416820498654 1105.6032167497965 3 369.5414611697197 MULTI CID FTMS 0 0 0 4630 3453732.0 0.3837824551359722 -4 0.0605487823486328 2 Unmodified _EEPTVIKKY_ ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF 36.12702656103203 0.0967173616627612 1 {M(Oxidation (M))|F}[HA]TV{I|L}KKY 9 3 + 53.862 0.0 0.0 4.8717 4.8717 86.394 0.0 0.0 0.0 11.598585965145048 11.478174818886371 11.478174818886371 14.0359402185842 0 0.0 0.0 0.3494850021680094 0.2742275032520141 {M(Oxidation (M))|F}[HA]TV{I|L}KKY;[TP]V{I|L}KK[YE]E;{[TV]|[{I|L}S]}P{I|L}KK[YE]E;KK{I|L}VTP[YE]E;{[TV]|[{I|L}S]}{I|L}PKK[YE]E;[TP]V{I|L}K{[HG]|PP}[EP]E;[K{I|L}]KVTP[YE]E;{[TV]|[{I|L}S]}{I|L}KKP[YE]E;KK{I|L}VTY[EP]E;[K{I|L}]KVTY[EP]E 4.8717;3.6022;2.5683;2.1148;2.1065;2.0448;2.0272;1.4997;1.3903;1.3027 -;-;-;-;-;-;-;-;-;- 193 + 1 2.25 89550.9 1.0 1398 3232 4630 DOHH2_400M_050219_1,4632 DOHH2_400M_050219_1,4632,EEPTVIKKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4633 24.435 132.0 693080.0 25 0 86180.0 38045 TPEALLGPKY 10 95 363.5381394854752 1087.5925890566257 3 363.5378295779228 MULTI CID FTMS 0 0 0 4630 297665.96875 0.4340636270475742 -3 0.0565814971923828 3 Unmodified _TPEALLGPKY_ ENSG00000077063|ENST00000160373|CTTNBP2 14.838274106304384 0.5985701837916485 1 PTV{I|L}KKY 7 6 45.575 0.0 0.0 4.1904 0.0 0.0 240.07533615589404 0.0 240.07533615589404 0.0 33.791874816941544 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.2742275032520141 PTV{I|L}KKY 4.1904 - 89 + 1 2.25 83306.0 1.0 1399 3232 4630 DOHH2_400M_050219_1,4633 DOHH2_400M_050219_1,4633,TPEALLGPKY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4634 24.442 367.0 163740.0 25 0 39210.0 -1 LGTYDFDLVLM 11 54 434.8820190193708 0 434.8818237185478 PEAK CID FTMS 0 0 0 4630 80988.3828125 0.6922687702333016 -11 0.3922920227050781 4 Oxidation (M) _LGTYDFDLVLM(Oxidation (M))_ ENSG00000070061|ENST00000374647|ELP1 1.3296431237094175 0.4761840153648598 1 V 1 -1 1.5938 0.0 0.0 0.18367 0.0 0.0 490.5448475096416 275.1041353815063 765.6489828911479 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.18367 + + 2 + 1 2.25 55447.0 1.0 1400 3232 4630 DOHH2_400M_050219_1,4634 DOHH2_400M_050219_1,4634,LGTYDFDLVLM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4636 24.447 135.0 539970.0 25 0 70475.0 + + 33319 YALEKEKV 8 104 490.28004500621154 978.5455370792232 2 490.2791320681572 MULTI CID FTMS 0 0 0 4635 348135.4375 0.976518074115149 2 -0.0279464721679687 1 Unmodified _SFVRKETI_ nc|ENSG00000166508|P33993-2|MCM7;ENSG00000166508|ENST00000303887|MCM7;ENST00000463722.5_1_7:99697202-99698956:-|nuORF 24.020572477871973 0.5389365498350341 1 YA{I|L}EKEKV 8 -1 + 63.409 0.0 0.0 6.4799 6.4799 90.661 0.0 0.0 0.0 50.64453507409706 5.221157291141836 5.221157291141836 9.744237387763093 0 0.4247425010840047 2.0 0.4247425010840047 0.0 YA{I|L}EKEKV;YAVR[RV]C{I|L};YA{I|L}AARVC{I|L};YAV[VG][RV]C{I|L};YA{I|L}EK[{I|L}T]AA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]RVC{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VRAAC{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VRAA{I|L}C{I|L};YA{I|L}[{M(Oxidation (M))|F}V]KPAA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV][VG]VC{I|L} 6.4799;5.4841;5.4012;4.5376;4.5115;4.14;4.1192;4.1021;3.9074;3.1935 -;-;-;-;-;-;-;-;-;- 432 + 1 2.25 62609.8 1.0 1401 3233 4635 DOHH2_400M_050219_1,4636 DOHH2_400M_050219_1,4636,SFVRKETI False False YALEKEKV 24.446652 490.2772 1954939.625 4635.0 nc|ENSG00000166508|P33993-2|MCM7;;ENSG00000166508|ENST00000303887|MCM7;;ENST00000463722.5_1_7:99697202-99698956:-|nuORF 5.028918425242106 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4637 24.46 800.0 112130.0 25 0 7940.0 + 8013 EMNGRIVAT 9 138 495.75549217489794 989.496431416596 2 495.7558471560478 MULTI CID FTMS 0 0 0 4635 82112.703125 1.0 0 0.0 2 Unmodified _EMNGRIVAT_ ENSG00000070756|ENST00000318607|PABPC1;ENSG00000151846|ENST00000281589|PABPC3;nc|ENSG00000070756|P11940-2|PABPC1 49.55428908609986 0.0413471690215031 1 HAV{I|L}C(Carbamidomethyl (C))PQD 8 9 43.767 0.0 0.0 4.4231 0.0 0.0 0.0 66.03576837711171 66.03576837711171 15.76351685329996 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3494850021680094 HAV{I|L}C(Carbamidomethyl (C))PQD 4.4231 - 547 + 1 2.25 69738.0 0.449999988079071 1402 3233 4635 DOHH2_400M_050219_1,4637 DOHH2_400M_050219_1,4637,EMNGRIVAT True True EMNGRIVAT 24.460471 495.755847156048 288280.75 4635.0 ENSG00000151846|ENST00000281589|PABPC3;;nc|ENSG00000070756|P11940-2|PABPC1;;ENSG00000070756|ENST00000318607|PABPC1 6.465510527292888 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4638 24.466 295.0 273400.0 25 0 38460.0 + 27132 PFMKEVKE 8 104 504.2645080076305 0 504.2642700076103 PEAK CID FTMS 0 0 0 4635 140129.40625 0.3306409506292045 49 -1.7649803161621094 3 Unmodified _PFMKEVKE_ REV__ENSG00000134874|ENST00000376829|DZIP1;REV__ENST00000479518.1_1_13:96236855-96239862:-|nuORF;REV__ENST00000485031.5_1_13:96234490-96239991:-|nuORF;REV__nc|ENSG00000134874|Q86YF9-2|DZIP1 8.593279151180031 0.5573742999696857 1 V 1 -1 6.9897 0.0 0.0 0.69445 0.0 0.0 251.01474577091523 653.4031466119749 904.4178923828902 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.69445 + + 13 + 1 2.25 68056.2 1.0 1403 3233 4635 DOHH2_400M_050219_1,4638 DOHH2_400M_050219_1,4638,PFMKEVKE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4641 24.477 270.0 252680.0 25 0 28325.0 + 37441 TLDHRLNDSY 10 85 617.2961995264787 1232.5778461197574 2 617.2964355349541 MULTI CID FTMS 0 0 0 4640 174743.828125 0.4088468532230363 -1 0.0037479400634765 1 Unmodified _TLDHRLNDSY_ ENSG00000081803|ENST00000449022|CADPS2;ENSG00000163618|ENST00000383710|CADPS;ENST00000490424.1_1_3:62521978-62535788:-|nuORF;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS 67.08073823543168 0.0190306485248484 1 [{I|L}T]DHR{[QV]|[N{I|L}]|[RA]|[KV]}DSY 10 0 + 72.176 0.0 0.0 5.8557 5.8557 86.691 0.0 0.0 0.0 19.428571858695136 45.97804375441612 19.428571858695136 9.164539485499256 0 2.305462187404089 2.0 0.3807196863200844 0.3252574989159953 + + [{I|L}T]DHR{[QV]|[N{I|L}]|[RA]|[KV]}DSY;[{I|L}T]DH[VG]{[QV]|[N{I|L}]|[RA]|[KV]}DSY;[{I|L}T]{M(Oxidation (M))|F}[KQ]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SY;[{I|L}T]D[RN][H{I|L}]DSY;[{I|L}T]DH[HT]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SY;[{I|L}T]DHR[SG][TP]SY;[{I|L}T]DH{[WN]|[YH]}{[RE]|[WV]}Y;[{I|L}T]DH[SG]R{[RE]|[WV]}Y;[{I|L}T]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SY;[{I|L}T]DHR[SG]{[RE]|[WV]}Y 5.8557;5.1122;5.0693;4.764;4.6005;4.5233;4.2144;3.9702;3.8973;3.5842 +;-;-;-;-;-;-;-;-;- + 638 1 2.25 55364.6 1.0 1404 3235 4640 DOHH2_400M_050219_1,4641 DOHH2_400M_050219_1,4641,TLDHRLNDSY True True TLDHRLNDSY 24.476873 617.296435534954 3385619.125 4640.0 nc|ENSG00000081803|Q86UW7-3|CADPS2;;ENSG00000081803|ENST00000449022|CADPS2;;ENST00000490424.1_1_3:62521978-62535788:-|nuORF;;nc|ENSG00000163618|Q9ULU8-4|CADPS;;ENSG00000163618|ENST00000383710|CADPS;;nc|ENSG00000163618|Q9ULU8-3|CADPS;;nc|ENSG00000081803|Q86UW7-2|CADPS2 7.066747506459554 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4642 24.491 800.0 347050.0 25 0 53983.0 + 5462 DLRGRTAL 8 201 451.2649440334965 900.515335133793 2 451.2650329470634 MULTI CID FTMS 0 0 0 4640 225276.890625 0.4308847539994338 -2 0.0279464721679687 2 Unmodified _DLRGRTAL_ ENSG00000139645|ENST00000267116|ANKRD52 53.832793166522166 0.1212192986213991 1 {I|L}DR[WK]A{I|L} 7 5 + 73.229 0.0 0.0 8.1318 8.1318 83.067 0.0 0.0 0.0 36.15018496601607 14.815082168734158 14.815082168734158 0.903277783274703 0 0.9780546455476145 2.0 0.3494850021680094 0.4247425010840047 {I|L}DR[WK]A{I|L};D{I|L}R[WK]A{I|L};{I|L}DR[QT]R{I|L};D{I|L}R[QT]R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[{I|L}V]A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L};{[CP]|[EA]}S[KA][{I|L}V]A{I|L};{[CP]|[EA]}[K{I|L}][VG]TA{I|L};[KA]{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L} 8.1318;8.0315;6.9945;6.8942;1.8002;1.5736;1.1912;1.0779;0.96891;0.46453 -;-;-;-;-;-;-;-;-;- 630 + 1 2.25 214590.7 0.8700000047683716 1405 3235 4640 DOHH2_400M_050219_1,4642 DOHH2_400M_050219_1,4642,DLRGRTAL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4643 24.505 800.0 349990.0 25 0 29617.0 44236 YLIAHLPRLE 10 233 408.9085410226262 1223.7037936680786 3 409.2437316775322 MULTI CID FTMS 0 0 0 4640 196341.8125 0.8411148154472401 -1 0.0037479400634765 3 Unmodified _YLIAHLPRLE_ ENST00000472011.5_1_1:235582749-235612074:+|nuORF;nc|ENSG00000285053|Q15813-2|TBCE;nc|ENSG00000285053|Q15813|TBCE 13.51866281300042 0.6207119795985845 1 Y{I|L}{I|L}H{I|L}AVNTN 10 6 64.936 0.0 0.0 5.3065 0.0 0.0 0.0 82.06694971256093 82.06694971256093 51.83669316503203 0.0 0.0 0.0 0 0.3935078169319297 1.5228787452803376 0.5387254899964358 0.4545391030138068 Y{I|L}{I|L}H{I|L}AVNTN 5.3065 - 1063 + 1 2.25 215208.6 0.8399999737739563 1406 3235 4640 DOHH2_400M_050219_1,4643 DOHH2_400M_050219_1,4643,YLIAHLPRLE False True TATAKNVL 24.504504 409.243731677532 1108687.125 4640.0 ENSG00000109805|ENST00000251496|NCAPG 3.746126333872477 2.0 False 8.0 False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_1 4644 24.508 210.0 412730.0 25 0 23865.0 43341 WMRGNPTSI 9 124 531.2643982366349 0 531.2639648318291 PEAK CID FTMS 0 0 0 4640 255958.796875 0.6394412903554202 -27 0.8006629943847656 4 Unmodified _WMRGNPTSI_ nc|ENSG00000158485|P29016-2|CD1B 9.38312468134398 0.3193474221348066 1 M 1 8 8.9136 0.0 0.0 0.8405 0.0 0.0 186.08035789729465 740.3717135065061 926.4520714038008 0.0 0.0 0.0 0.0 0 0.1923877696554315 0.0 0.0 0.0 + M 0.8405 + + 19 + 1 2.25 69243.3 1.0 1407 3235 4640 DOHH2_400M_050219_1,4644 DOHH2_400M_050219_1,4644,WMRGNPTSI False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4645 24.513 254.0 378490.0 25 0 40694.0 + 37442 TLDHRLNDSY 10 108 411.8668323551543 1232.578667665663 3 411.8670837283134 MULTI CID FTMS 0 0 0 4640 111780.4140625 0.3853510820237277 -2 0.0279464721679687 5 Unmodified _TLDHRLNDSY_ ENSG00000081803|ENST00000449022|CADPS2;ENSG00000163618|ENST00000383710|CADPS;ENST00000490424.1_1_3:62521978-62535788:-|nuORF;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS 23.78978130925829 0.4341852049148378 1 [{I|L}T]DQQH{[QN]|[E{I|L}]|[KN]}SY 10 4 + 51.673 0.0 0.0 4.1923 4.1923 76.186 0.0 0.0 0.0 18.172874778693355 15.942577266510582 15.942577266510582 4.247425010840047 0 0.3494850021680094 2.0 0.805462187404089 0.0 [{I|L}T]DQQH{[QN]|[E{I|L}]|[KN]}SY;[{I|L}T]D[RH]{[QV]|[N{I|L}]|[RA]|[KV]}DSY;[{I|L}T]DQQHS{[QN]|[E{I|L}]|[KN]}Y;{NN|[MP]|[D{I|L}]|[EV]}TQQH{[QN]|[E{I|L}]|[KN]}SY;{NN|[MP]|[D{I|L}]|[EV]}T[RH]{[QV]|[N{I|L}]|[RA]|[KV]}DSY;{NN|[MP]|[D{I|L}]|[EV]}TQQHS{[QN]|[E{I|L}]|[KN]}Y;{NN|[MP]|[D{I|L}]|[EV]}T[RH][WR]SY;[HM]D{[QV]|[N{I|L}]|[RA]|[KV]}[WR]VY;[HM]D{[QV]|[N{I|L}]|[RA]|[KV]}[QT]{I|L}VY;[QA][VP]DHQQDPV 4.1923;3.8477;3.7038;2.2972;1.9526;1.8088;1.4227;1.2641;1.0199;0.92564 -;+;-;-;-;-;-;-;-;- + 540 1 2.25 78910.9 1.0 1408 3235 4640 DOHH2_400M_050219_1,4645 DOHH2_400M_050219_1,4645,TLDHRLNDSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4647 24.529 800.0 134400.0 25 0 7839.9 + 29897 QSDDVAEENE 10 152 568.2203726277233 1134.4261923222466 2 568.2208129763603 MULTI CID FTMS 0 0 0 4646 79449.9765625 0.7783629040041509 1 -0.073282241821289 1 Unmodified _QSDDVAEENE_ REV__nc|ENSG00000276597|A0A5A6|TRBV11-3 15.248480904072842 0.5916873121453583 1 QSDPT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MY 9 -1 + 55.711 0.0 0.0 4.9109 4.9109 86.427 0.0 0.0 0.0 38.72096334963398 15.245203436123385 15.245203436123385 13.278324880759484 0 0.9163865622122672 0.585026652029182 0.2614393726401688 0.0 QSDPT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MY;QSDPTD[Y{M(Oxidation (M))|F}]Y;QSD[KG][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]MY;[TP][DN]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MY;[TP][WM][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]MY;[EP][NS]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MY;[TP][DN]TD[Y{M(Oxidation (M))|F}]Y;[EP]M[NG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MY;{[QS]|[NT]}[{M(Oxidation (M))|F}E]DT[NS][HA];[EP][NS]TD[Y{M(Oxidation (M))|F}]Y 4.9109;3.7404;3.5583;2.1781;1.8724;1.5321;1.0076;0.8462;0.39899;0.36166 -;-;-;-;-;-;-;-;-;- 386 + 1 2.25 86962.4 0.5600000023841858 1409 3236 4646 DOHH2_400M_050219_1,4647 DOHH2_400M_050219_1,4647,QSDDVAEENE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4648 24.53 19.0 1785100.0 25 0 161480.0 + 29907 QSDPTQSGMY 10 72 557.2298374107421 1112.445121888284 2 557.2296630740166 MULTI CID FTMS 0 0 0 4646 2061109.5 0.8959545952073975 2 -0.1205005645751953 2 Unmodified _QSDPTQSGMY_ ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1 32.78568957990786 0.2337485590374503 1 {[CT]|[{M(Oxidation (M))|F}G]}{[C(Carbamidomethyl (C))E]|[WC]}[H{I|L}]GMY 9 7 {[CT]|[{M(Oxidation (M))|F}G]}{[C(Carbamidomethyl (C))E]|[WC]}[H{I|L}]G + + 23.583 -10.33 -1.2907 2.12 2.12 48.991 0.0 0.0 0.0 0.0 11.989700043360187 0.0 0.0 0 0.5 0.0 0.0 0.0 {[CT]|[{M(Oxidation (M))|F}G]}{[C(Carbamidomethyl (C))E]|[WC]}[H{I|L}]GMY 2.12 - 89 + 1 2.25 33450.5 1.0 1410 3236 4646 DOHH2_400M_050219_1,4648 DOHH2_400M_050219_1,4648,QSDPTQSGMY False True QSDPTQSGMY 24.53045 557.2324 11761024.0 4646.0 nc|ENSG00000105856|O60381-3|HBP1;;ENSG00000105856|ENST00000222574|HBP1;;nc|ENSG00000105856|O60381-2|HBP1 4.287294149398804 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4649 24.533 108.0 606120.0 25 0 41563.0 + 29997 QTESQQIRY 9 85 576.7859297323357 1151.557306531471 2 576.7861205935478 MULTI CID FTMS 0 0 0 4646 515250.21875 0.9680520075269416 -1 0.0435676574707031 3 Unmodified _QTESQQIRY_ ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3 76.82478488871298 0.0184607444814265 1 QTESQQ{I|L}RY 9 0 + 92.979 0.0 0.0 8.0742 8.0742 92.798 0.0 0.0 0.0 48.86276329230289 11.271211393095257 11.271211393095257 9.208187539523747 0 1.1947116695113236 0.958607314841775 0.0 0.8494850021680094 + + QTESQQ{I|L}RY;QTESQ[AG]{I|L}RY;QTES[AG]Q{I|L}RY;QTES[AG][AG]{I|L}RY;[AG][WM]QQ{I|L}RY;[AG][WM]Q[AG]{I|L}RY;[AG][WM][AG]Q{I|L}RY;[DP]Q[HV]{I|L}S{[HG]|PP}Y;[NP]E[HV]{I|L}S{[HG]|PP}Y;[DP]N[H{I|L}]{I|L}S{[HG]|PP}Y 8.0742;7.2746;7.2746;6.4787;4.9621;4.1624;4.1624;2.9785;2.8256;2.6678 +;-;-;-;-;-;-;-;-;- + 354 + 1 2.25 55224.7 1.0 1411 3236 4646 DOHH2_400M_050219_1,4649 DOHH2_400M_050219_1,4649,QTESQQIRY True True QTESQQIRY 24.532741 576.786120593548 2863617.75 4646.0 ENSG00000133657|ENST00000645319|ATP13A3;;nc|ENSG00000133657|Q9H7F0|ATP13A3 6.678924401601155 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4650 24.535 83.0 739760.0 25 0 62191.0 39461 VAPTIIPTPM 10 82 520.2957656977336 0 520.2982055544853 PEAK CID FTMS 0 0 0 4646 455135.0625 1.0 0 0.0 4 Unmodified _VAPTIIPTPM_ ENSG00000062038|ENST00000264012|CDH3;ENST00000542274.5_1_16:68679206-68732300:+|nuORF;ENST00000567674.1_1_16:68721613-68732300:+|nuORF;nc|ENSG00000062038|P22223-2|CDH3 10.073929032068715 0.3742530088597855 1 H{I|L}GSE[NG]PS 9 9 19.28 0.0 0.0 1.8564 0.0 0.0 77.12740678433586 80.05130182437733 157.17870860871318 0.0 0.0 0.0 0.0 0 1.0 0.0 0.2614393726401688 0.0 H{I|L}GSE[NG]PS 1.8564 - 86 + 1 2.25 52044.7 1.0 1412 3236 4646 DOHH2_400M_050219_1,4650 DOHH2_400M_050219_1,4650,VAPTIIPTPM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4651 24.538 151.0 485330.0 25 0 34633.0 7631 EIVWEVLFL 9 113 383.2185292468481 1146.6337583407444 3 383.2177307009697 MULTI CID FTMS 0 0 0 4646 236276.46875 1.0 0 0.0 5 Unmodified _EIVWEVLFL_ ENSG00000154975|ENST00000451037|CA10 17.11289562659939 0.3734572693229295 1 {I|L} 1 8 16.594 0.0 0.0 1.4472 0.0 0.0 1015.5386788503132 0.0 1015.5386788503132 0.0 2.614393726401687 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L} 1.4472 + + 71 + 1 2.25 62498.8 1.0 1413 3236 4646 DOHH2_400M_050219_1,4651 DOHH2_400M_050219_1,4651,EIVWEVLFL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4652 24.541 180.0 246340.0 25 0 25063.0 + 6834 EEDEDAYKKQF 11 77 467.8772436903019 1400.6099016711055 3 467.8774902224541 MULTI CID FTMS 0 0 0 4646 193973.375 1.0 0 0.0 6 Unmodified _EEDEDAYKKQF_ ENSG00000122406|ENST00000370321|RPL5 27.128809495255545 0.4552099081665574 1 EEDEDAYK[KQ]{M(Oxidation (M))|F} 11 0 + 54.149 0.0 0.0 3.8661 3.8661 84.945 0.0 0.0 0.0 37.717160319703744 3.309710622901214 3.309710622901214 28.57981756115105 0 0.0 0.9208187539523752 0.5 0.0 + + EEDEDAYK[KQ]{M(Oxidation (M))|F};EEDE[RH][R{M(Oxidation (M))|F}]RQ;EED{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[R{M(Oxidation (M))|F}]RQ;[YK][WK]Q{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}D[HC] 3.8661;1.8256;1.2536;0.43866 +;-;-;- + 150 + 1 2.25 42518.7 1.0 1414 3236 4646 DOHH2_400M_050219_1,4652 DOHH2_400M_050219_1,4652,EEDEDAYKKQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4653 24.549 470.0 407910.0 25 0 67860.0 + 5230 DIYSKKTL 8 151 484.276463754826 966.538374576452 2 484.2760497927666 MULTI CID FTMS 0 0 0 4646 132763.078125 0.0935159524964626 -2 0.0473155975341796 7 Unmodified _DIYSKKTL_ ENSG00000173473|ENST00000254480|SMARCC1;ENST00000483847.1_1_3:47712102-47719818:-|nuORF 66.45667989310934 0.1167381424463928 1 {I|L}DYSKKT{I|L} 8 2 + 93.735 0.0 0.0 9.698 9.698 88.659 0.0 0.0 0.0 63.40205618315415 19.59183145787911 19.59183145787911 4.119543704721593 0 1.2416440611282624 2.0 1.5400990676322908 0.0 {I|L}DYSKKT{I|L};D{I|L}YSKKT{I|L};{I|L}D{I|L}[HK][WR];D{I|L}{I|L}[HK][WR];{I|L}D[HM]KK[VP];D{I|L}[HM]KK[VP];{I|L}[{M(Oxidation (M))|F}V]T[RK]G{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]{I|L}T[RK]G{M(Oxidation (M))|F} 9.698;9.2718;4.2555;3.8293;3.1192;2.693;0.5111;0.084883 -;+;-;-;-;-;-;- + 502 + 1 2.25 150308.0 1.0 1415 3236 4646 DOHH2_400M_050219_1,4653 DOHH2_400M_050219_1,4653,DIYSKKTL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4654 24.563 800.0 147900.0 25 0 15063.0 + 38468 TSDKPLQGDGY 11 154 590.7776843031011 1179.540815673002 2 590.7784911990166 MULTI CID FTMS 0 0 0 4646 126646.2890625 0.7895443962729716 -1 0.0435676574707031 8 Unmodified _TSDKPLQGDGY_ ENSG00000153201|ENST00000283195|RANBP2 115.8214108901486 0.0276667897965723 1 TSDK[{I|L}P]QGDGY 11 0 + 101.78 0.0 0.0 8.6292 8.6292 95.989 0.0 0.0 0.0 62.847882937263336 15.070623213458006 15.070623213458006 14.758276371937256 0 3.402797146631619 1.5228787452803376 1.610924374808178 0.0 + + TSDK[{I|L}P]QGDGY;TSDK[{I|L}P]Q[DN]Y;TSDK[HT]S[KG]GY;TSD[HT]KS[KG]GY;{[MG]|[TS]}DK[{I|L}P]QGDGY;TSDK[HT]P[PS]NP;TSDK[{I|L}P][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}P;TSTHDKS[KG]GY;TSDK{[DA]|[EG]}[YR]QP;TSDK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{[MG]|[TS]}QP 8.6292;7.378;7.3268;6.1709;6.0037;5.796;5.6366;5.5907;5.363;5.3301 +;-;-;-;+;-;-;-;-;- + 6599 + 1 2.25 92068.7 0.6200000047683716 1416 3236 4646 DOHH2_400M_050219_1,4654 DOHH2_400M_050219_1,4654,TSDKPLQGDGY True True TSDKPLQGDGY 24.563248 590.778491199017 740642.9375 4646.0 ENSG00000153201|ENST00000283195|RANBP2 8.03102970123291 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4655 24.577 800.0 92043.0 25 0 6972.0 + 6835 EEDEDAYKKQF 11 109 701.3130416739062 1400.6115304146124 2 701.3104736208916 MULTI CID FTMS 0 0 0 4646 126117.78125 1.0 0 0.0 9 Unmodified _EEDEDAYKKQF_ ENSG00000122406|ENST00000370321|RPL5 84.06023858526366 0.004637051958636 1 EEDEDAYKKQ{M(Oxidation (M))|F} 11 0 EE + + 63.807 20.814 8.0648 4.5557 4.5557 55.086 0.0 0.0 0.0 0.0 46.22569405849405 0.0 0.0 0 1.4698565171985374 0.0 0.0 0.6747425010840047 + + EEDEDAYKKQ{M(Oxidation (M))|F} 4.5557 + + 325 + 1 2.25 58579.7 0.5899999737739563 1417 3236 4646 DOHH2_400M_050219_1,4655 DOHH2_400M_050219_1,4655,EEDEDAYKKQF True True EEDEDAYKKQF 24.577078 701.310473620892 1554814.40625 4646.0 ENSG00000122406|ENST00000370321|RPL5 9.869759559631348 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4656 24.584 378.0 129350.0 25 0 10664.0 + 40880 VLREENEVV 9 97 543.7933480071512 1085.5721430811022 2 543.7939330935478 MULTI CID FTMS 0 0 0 4646 81550.21875 1.0 0 0.0 10 Unmodified _VLREENEVV_ REV__ENSG00000124215|ENST00000348616|CDH26;REV__nc|ENSG00000124215|Q8IXH8-1|CDH26 19.256988751693697 0.3154191944385105 1 [{I|L}V]W 3 -1 34.705 0.0 0.0 3.1969 0.0 0.0 0.0 684.3319796197874 684.3319796197874 21.2101498947667 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}V]W 3.1969 - 127 + 1 2.25 44322.5 1.0 1418 3236 4646 DOHH2_400M_050219_1,4656 DOHH2_400M_050219_1,4656,VLREENEVV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4657 24.586 121.0 583280.0 25 0 54460.0 + -1 VTDRSDARLQY 11 89 442.2284332858074 441.2211568192074 1 442.2282592654228 MULTI CID FTMS 0 0 0 4646 523620.0 0.451517702486982 -6 0.1134681701660156 11 ENSG00000117362|ENST00000369109|APH1A;nc|ENSG00000117362|Q96BI3-2|APH1A 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y 3 -1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} + + 11.42 -0.16712 -0.06424 2.5883 2.5883 49.625 0.0 0.0 0.0 0.0 9.82618946870394 0.0 0.0 0 0.0 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y 2.5883 - 4 + 1 2.25 60932.9 1.0 1419 3236 4646 DOHH2_400M_050219_1,4657 DOHH2_400M_050219_1,4657, False False VTDRSDARLQY 24.586374 442.228259265423 9521691.0 4646.0 ENSG00000117362|ENST00000369109|APH1A;;nc|ENSG00000117362|Q96BI3-2|APH1A -0.4575005769729614 3.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4659 24.596 365.0 234300.0 25 0 23685.0 661 AELYKGPE 8 122 453.7337204448337 905.4528879564674 2 453.7335693240166 MULTI CID FTMS 0 0 0 4658 170297.328125 0.7112639993630684 3 -0.1264896392822265 1 Unmodified _AELYKGPE_ ENST00000491365.1_1_3:49045513-49045807:+|nuORF 23.1484247019978 0.5573009939494978 1 {[CP]|[EA]}TP{I|L}T{M(Oxidation (M))|F}K 8 6 {[CP]|[EA]}T + + 25.601 10.942 3.6337 2.8274 2.8274 50.111 0.0 0.0 0.0 0.0 11.734676624255837 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.1171302707394362 {[CP]|[EA]}TP{I|L}T{M(Oxidation (M))|F}K 2.8274 - 142 + 1 2.25 72040.3 1.0 1420 3237 4658 DOHH2_400M_050219_1,4659 DOHH2_400M_050219_1,4659,AELYKGPE False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4660 24.597 22.0 2473700.0 25 0 220540.0 + 7178 EEPTVIKKY 9 82 553.8087319170776 1105.602910900955 2 553.8087036013603 MULTI CID FTMS 0 0 0 4658 2439474.0 0.5110261963681246 1 -0.0472183227539062 2 Unmodified _EEPTVIKKY_ ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF 38.17557092003332 0.0854718145212029 1 EEPTV{I|L}KKY 9 0 + 76.119 0.0 0.0 6.8849 6.8849 95.215 0.0 0.0 0.0 31.617157990946595 12.98332479720628 12.98332479720628 35.18925768742528 0 0.8494850021680094 2.0 0.0 0.0 + + EEPTV{I|L}KKY;[TP]V{I|L}KKEEY;{[VA]|[{I|L}G]}[{I|L}V][PA]VTP[HC];KK{I|L}{[TV]|[{I|L}S]}PEEY;[K{I|L}]T[VP]KEEY;[K{I|L}]K{[TV]|[{I|L}S]}PEEY 6.8849;3.7021;1.1067;0.44423;0.27389;0.21334 +;-;-;-;-;- + 121 + 1 2.25 49122.7 1.0 1421 3237 4658 DOHH2_400M_050219_1,4660 DOHH2_400M_050219_1,4660,EEPTVIKKY True True EEPTVIKKY 24.597301 553.80870360136 60030802.0 4658.0 ENST00000490175.5_1_20:17923003-17949420:-|nuORF;;ENST00000547000.1_1_12:101462478-101462640:+|nuORF;;ENSG00000089006|ENST00000377759|SNX5 6.466540495554606 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4661 24.611 800.0 165210.0 25 0 9045.2 + 25195 MTESYEQEKY 10 146 654.2769274349866 1306.5393019367732 2 654.2755004763603 MULTI CID FTMS 0 0 0 4658 174010.015625 0.632331623857471 -2 0.1168498992919921 3 Unmodified _MTESYEQEKY_ ENSG00000040275|ENST00000265295|SPDL1;ENST00000510751.5_1_5:169015420-169022772:+|nuORF;nc|ENSG00000040275|Q96EA4-2|SPDL1;nc|ENSG00000040275|Q96EA4-3|SPDL1 114.18643581695662 0.001143558078943 1 MTESYEQEKY 10 0 + 118.36 0.0 0.0 9.0589 9.0589 93.086 0.0 0.0 0.0 77.11880661731264 12.64136888583522 12.64136888583522 9.164539485499262 0 1.1237125054200234 1.6989700043360187 1.8539171939081167 0.4247425010840047 + + MTESYEQEKY;MTESYE[AG]EKY;MTEEYSQEKY;MTEEYS[AG]EKY;MT{M(Oxidation (M))|F}[C(Carbamidomethyl (C))N]SQEKY;MT{M(Oxidation (M))|F}[C(Carbamidomethyl (C))N]S[AG]EKY;MTESYE[WH][QP];MTEVVEQEM[DP];MTESY{M(Oxidation (M))|F}[RP]NY;MT[C(Carbamidomethyl (C))Q][YG]QEKY 9.0589;8.3574;8.1041;7.4027;7.079;6.3775;5.7492;5.6145;5.5746;5.4979 +;-;-;-;-;-;-;-;-;- + 7536 + 1 2.25 103229.6 0.7200000286102295 1422 3237 4658 DOHH2_400M_050219_1,4661 DOHH2_400M_050219_1,4661,MTESYEQEKY True True MTESYEQEKY 24.611145 654.27550047636 1621659.75 4658.0 ENSG00000040275|ENST00000265295|SPDL1;;ENST00000510751.5_1_5:169015420-169022772:+|nuORF;;nc|ENSG00000040275|Q96EA4-2|SPDL1;;nc|ENSG00000040275|Q96EA4-3|SPDL1 8.969164848327637 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4662 24.615 189.0 330100.0 25 0 25215.0 7784 ELGYQNFLY 9 108 382.85257690143646 1145.5359013045097 3 382.8521911501884 MULTI CID FTMS 0 0 0 4658 168132.21875 1.0 0 0.0 4 Unmodified _ELGYQNFLY_ ENSG00000101997|ENST00000376227|CCDC22 8.593279151180031 0.6146971463335029 1 [VP]W 3 9 17.905 0.0 0.0 1.563 0.0 0.0 0.0 760.315051044997 760.315051044997 -0.2165251409206021 0.0 -0.2165251409206021 0.0 0 0.0 0.744727494896694 0.0 0.0 [VP]W 1.563 - 102 1 2.25 53474.8 1.0 1423 3237 4658 DOHH2_400M_050219_1,4662 DOHH2_400M_050219_1,4662,ELGYQNFLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4663 24.626 672.0 192650.0 25 0 23475.0 + 7532 EIDKNDHLY 9 134 573.7743529020004 1145.5341528708009 2 573.7747680544853 MULTI CID FTMS 0 0 0 4658 101026.953125 1.0 0 0.0 5 Unmodified _EIDKNDHLY_ ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2 45.69961567697781 0.0497987121815769 1 {[QN]|[E{I|L}]|[KN]}DK{[YC]|[HE]}{M(Oxidation (M))|F}TQ 9 5 + 49.914 0.0 0.0 4.3572 4.3572 77.557 0.0 0.0 0.0 13.657397654350184 5.014000881036893 5.014000881036893 5.014000881036893 0 0.3054621874040891 2.0 0.0 0.4517188504113846 {[QN]|[E{I|L}]|[KN]}DK{[YC]|[HE]}{M(Oxidation (M))|F}TQ;{[QN]|[E{I|L}]|[KN]}DK[DN]H{I|L}Y;{[QN]|[E{I|L}]|[KN]}DK{[YC]|[HE]}T{M(Oxidation (M))|F}Q;{[QN]|[E{I|L}]|[KN]}DK{[YC]|[HE]}T{M(Oxidation (M))|F}K;{[QN]|[E{I|L}]|[KN]}T{[YC]|[HE]}{I|L}E{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ED{[NV]|[RG]}{M(Oxidation (M))|F}TQ;{[QN]|[E{I|L}]|[KN]}DK[NS]E[{I|L}A]Q;{[QN]|[E{I|L}]|[KN]}DK[DN]{[RE]|[WV]}Q;{[QN]|[E{I|L}]|[KN]}DK{[YC]|[HE]}{[NV]|[RG]}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EDKW{M(Oxidation (M))|F}Q 4.3572;3.9195;3.7432;3.1769;3.165;2.8647;2.7612;2.7588;2.658;2.5336 -;+;-;-;-;-;-;-;-;- + 1109 + 1 2.25 97610.1 1.0 1424 3237 4658 DOHH2_400M_050219_1,4663 DOHH2_400M_050219_1,4663,EIDKNDHLY True True EIDKNDHLY 24.626474 573.774768054485 496930.03125 4658.0 ENSG00000102316|ENST00000375068|MAGED2;;nc|ENSG00000102316|Q9UNF1-2|MAGED2 6.780875523885091 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4664 24.628 38.0 1649300.0 25 0 187720.0 + 30943 RKLLPEDY 8 81 517.2852793069982 1032.5560056807965 2 517.2857543826103 MULTI CID FTMS 0 0 0 4658 1757697.125 0.8409251507455406 3 -0.1264896392822265 6 Unmodified _RKLLPEDY_ REV__ENSG00000117859|ENST00000428468|OSBPL9;REV__nc|ENSG00000117859|Q96SU4-2|OSBPL9;REV__nc|ENSG00000117859|Q96SU4-3|OSBPL9;REV__nc|ENSG00000117859|Q96SU4-4|OSBPL9;REV__nc|ENSG00000117859|Q96SU4-5|OSBPL9;REV__nc|ENSG00000117859|Q96SU4-6|OSBPL9;REV__nc|ENSG00000117859|Q96SU4-7|OSBPL9 2.577480529830294 0.808687252328423 1 Y 1 -1 10.969 0.0 0.0 1.0623 0.0 0.0 851.4814492616541 0.0 851.4814492616541 0.0 1.8204087070553496 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0623 + + 6 + 1 2.25 52426.2 1.0 1425 3237 4658 DOHH2_400M_050219_1,4664 DOHH2_400M_050219_1,4664,RKLLPEDY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4665 24.63 106.0 485700.0 25 0 24216.0 + + 7202 EEQLQQIR 8 86 522.2781117916558 1042.5416706501114 2 522.2775146365166 MULTI CID FTMS 0 0 0 4658 345000.03125 1.0 0 0.0 7 Unmodified _EEQLQQLR_ ENSG00000186395|ENST00000269576|KRT10;ENSG00000186393|ENST00000335552|KRT26;Q7Z3Y9;P13645;P02535-1 74.42276476219924 0.1056688965812189 1 EEQ{I|L}QQ{I|L}R 8 -1 + 70.628 0.0 0.0 6.7746 6.7746 91.249 0.0 0.0 0.0 49.92660950345218 14.904630595263413 14.904630595263413 9.262137858390815 0 0.6505149978319906 1.5228787452803376 0.0 1.1549471895720984 EEQ{I|L}QQ{I|L}R;EEQ{I|L}Q[AG]{I|L}R;EEQ{I|L}[AG]Q{I|L}R;EE[AG]{I|L}QQ{I|L}R;EEQ{I|L}[AG][AG]{I|L}R;EE[AG]{I|L}Q[AG]{I|L}R;EE[AG]{I|L}[AG]Q{I|L}R;[AG]E[R{I|L}]{I|L}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[R{I|L}]{I|L}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.7746;5.8861;5.8861;5.8861;5.0029;5.0029;5.0029;0.44161;0.12673 +;-;-;-;-;-;-;-;- + 132 + 1 2.25 47366.4 1.0 1426 3237 4658 DOHH2_400M_050219_1,4665 DOHH2_400M_050219_1,4665,EEQLQQLR False False EEQLQQIR 24.629918 522.277514636517 1614979.375 4658.0 ENSG00000186395|ENST00000269576|KRT10;;ENSG00000186393|ENST00000335552|KRT26;;Q7Z3Y9;;P13645;;P02535-1 5.841110388437907 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4666 24.634 185.0 446910.0 25 0 98778.0 + 36532 ATELTHEDY 9 112 539.2462565434623 0 539.2464477419853 PEAK CID FTMS 0 0 0 4658 136952.90625 0.8234751194087806 -3 0.1205978393554687 8 Unmodified _TAHQPYHSH_ ENSG00000165916|ENST00000298852|PSMC3 12.531546534597751 0.2832320739326029 1 E{I|L}T 3 9 18.94 0.0 0.0 1.7595 0.0 0.0 171.0952830070433 559.1788424127561 730.2741254197995 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E{I|L}T 1.7595 - 66 + 1 2.25 69427.3 1.0 1427 3237 4658 DOHH2_400M_050219_1,4666 DOHH2_400M_050219_1,4666,TAHQPYHSH False False ATELTHEDY 24.633503 539.246447741985 1664131.625 4658.0 ENSG00000165916|ENST00000298852|PSMC3 6.959620952606201 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4668 24.641 295.0 336090.0 25 0 15932.0 + -1 IVWYQFQK 8 138 385.2070372381646 0 385.2076293826103 PEAK CID FTMS 0 0 0 4667 87748.9296875 0.1561826183089421 14 -0.3730487823486328 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))IVWYQFQK_ REV__MER57-int_dup428|chr6:33132600-33134898:-|2.586491035679624|0.0776769780525371|5.06|48.0|141|2|anti-sense 2.889219685676258 0.5898224805723975 1 D 1 -1 3.9794 0.0 0.0 0.51788 0.0 0.0 554.2677599237918 96.0824450128539 650.3502049366457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.51788 - 23 + 1 2.25 82972.3 1.0 1428 3238 4667 DOHH2_400M_050219_1,4668 DOHH2_400M_050219_1,4668,IVWYQFQK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4669 24.647 321.0 189430.0 25 0 17054.0 + 792 AESLQPKGY 9 92 496.75646015099375 991.4983673687876 2 496.7563354372978 MULTI CID FTMS 0 0 0 4667 112866.8359375 0.226344845397231 -6 0.216043472290039 2 Unmodified _AESLQPKGY_ ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP 54.773552608820026 0.0299037012502309 1 {[CP]|[EA]}S{I|L}QPKGY 9 0 + 39.866 0.0 0.0 4.0208 4.0208 81.613 0.0 0.0 0.0 21.44947476127748 9.966299270632042 9.966299270632042 9.208187539523756 0 0.8182503180159344 0.638272163982407 0.0 0.5 + + {[CP]|[EA]}S{I|L}QPKGY;{[CP]|[EA]}S{I|L}[AG]PKGY;{[CP]|[EA]}S{I|L}Q[YK][PG] 4.0208;3.0921;2.5414 +;-;- + 217 + 1 2.25 52565.0 1.0 1429 3238 4667 DOHH2_400M_050219_1,4669 DOHH2_400M_050219_1,4669,AESLQPKGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4670 24.661 800.0 82441.0 25 0 5135.5 + 42193 VSDPSPNTDPAKY 13 90 695.8280209608179 1389.6414889884356 2 695.8278076052666 MULTI CID FTMS 0 0 0 4667 89353.2578125 1.0 0 0.0 3 Unmodified _VSEKEFNFLDY_ ENSG00000063587|ENST00000650114|ZNF275 11.494710602746466 0.7960433852372589 1 VSDPS[RH]PSQD 11 9 77.243 0.0 0.0 5.5585 0.0 0.0 0.0 181.0621126764281 181.0621126764281 58.508889005854286 0.0 0.0 0.0 0 1.079689690656103 1.3979400086720375 0.3494850021680094 0.0 VSDPS[RH]PSQD 5.5585 - 665 + 1 2.25 54371.1 0.5400000214576721 1430 3238 4667 DOHH2_400M_050219_1,4670 DOHH2_400M_050219_1,4670,VSEKEFNFLDY False False VSDPSPNTDPAKY 24.661003 695.827807605267 688206.875 4667.0 ENSG00000063587|ENST00000650114|ZNF275 8.445457140604654 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4671 24.675 800.0 135310.0 25 0 24528.0 + 25515 NENPSKDQGW 10 126 587.7595669313847 1173.504580929569 2 588.2612182497978 MULTI CID FTMS 0 0 0 4667 92952.84375 1.0 0 0.0 4 Unmodified _NENPSKDQGW_ ENSG00000100354|ENST00000454349|TNRC6B;nc|ENSG00000100354|Q9UPQ9-1|TNRC6B 43.77239144664712 0.1177314611616471 1 {[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}A][YE]PD[HS] 10 8 + 25.862 0.0 0.0 2.2038 2.2038 72.805 0.0 0.0 0.0 5.790338996000468 0.2152998730866073 0.2152998730866073 5.790338996000468 0 0.5 0.0 0.3807196863200844 0.6139829889124311 {[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}A][YE]PD[HS];{[QN]|[E{I|L}]|[KN]}DPS[HS]{M(Oxidation (M))|F}GW;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}A]T[C(Carbamidomethyl (C))K]D[HS];{[QN]|[E{I|L}]|[KN]}NDD[R{I|L}]HY;{[QN]|[E{I|L}]|[KN]}NDD[R{I|L}]NW;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}G[R{I|L}]DDN[HS];{[QN]|[E{I|L}]|[KN]}NDD[R{I|L}]GGW;{[QN]|[E{I|L}]|[KN]}D[DN][R{I|L}]HY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[YV]N[HS];{[QN]|[E{I|L}]|[KN]}D[DN][R{I|L}]NW 2.2038;1.7104;1.6908;1.5963;1.5032;1.4868;1.4643;1.4414;1.3529;1.3484 -;-;-;-;-;-;-;-;-;- 757 1 2.25 83322.2 0.5400000214576721 1431 3238 4667 DOHH2_400M_050219_1,4671 DOHH2_400M_050219_1,4671,NENPSKDQGW True True NENPSKDQGW 24.674836 587.7602 919216.5 4667.0 nc|ENSG00000100354|Q9UPQ9-1|TNRC6B;;ENSG00000100354|ENST00000454349|TNRC6B 4.15261443456014 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4673 24.68 26.0 1961000.0 25 0 365880.0 + 24683 MMDPNSTQRY 10 51 621.7654073089132 1241.5162616846262 2 621.7659789919853 MULTI CID FTMS 0 0 0 4672 2132953.0 0.4957391754836817 2 -0.0881004333496093 1 Unmodified _MMDPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 42.312485326615175 0.1331477410672653 1 MMDPNSTQRY 10 0 + 97.614 0.0 0.0 7.8624 7.8624 91.352 0.0 0.0 0.0 85.6238255311623 11.505149978319906 11.505149978319906 9.164539485499247 0 0.9247425010840048 1.6989700043360187 0.0 0.75 + + MMDPNSTQRY;MMDPGGSTQRY;MMDPNST[AG]RY;MMDPGGST[AG]RY;MMDPNST[KT]{[MS]|[{M(Oxidation (M))|F}A]};MMDPN[C(Carbamidomethyl (C))R]RY;MMDPGGST[KT]{[MS]|[{M(Oxidation (M))|F}A]};MMYYSTQRY;MMDPGG[C(Carbamidomethyl (C))R]RY;MMYYST[AG]RY 7.8624;7.1243;7.1243;6.389;6.0656;6.049;5.3303;5.3236;5.3073;4.5819 +;-;-;-;-;-;-;-;-;- + 261 + 1 2.254 44212.7 1.0 1432 3239 4672 DOHH2_400M_050219_1,4673 DOHH2_400M_050219_1,4673,MMDPNSTQRY False True MMDPNSTQRY 24.679576 621.765978991985 43727896.0 4672.0 ENSG00000124571|ENST00000265351|XPO5 11.21812343597412 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4674 24.693 800.0 167270.0 25 0 13091.0 + 6873 SVEGEGEEEGEEY 13 121 721.7758793545264 1441.5372057758527 2 721.7753784060478 MULTI CID FTMS 0 0 0 4672 140897.984375 0.369862463631954 -2 0.0885791778564453 2 Unmodified _EEEKEQDEDEY_ ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000123416|ENST00000336023|TUBA1B;nc|ENSG00000123416|P68363-2|TUBA1B 22.736283301280096 0.5583477779825423 1 {[DA]|[EG]}EEGEEWGE 10 7 84.609 0.0 0.0 5.8693 0.0 0.0 0.0 307.09821586790275 307.09821586790275 7.8904669335942685 0.0 0.0 0.0 0 0.3494850021680094 1.0969100130080565 3.606666039983483 0.0 {[DA]|[EG]}EEGEEWGE 5.8693 - 26060 1 2.254 99327.3 0.4799999892711639 1433 3239 4672 DOHH2_400M_050219_1,4674 DOHH2_400M_050219_1,4674,EEEKEQDEDEY False True SVEGEGEEEGEEY 24.693409 721.775378406048 1858553.625 4672.0 ENSG00000167552|ENST00000301071|TUBA1A;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;ENSG00000123416|ENST00000336023|TUBA1B;;nc|ENSG00000123416|P68363-2|TUBA1B 7.1622843742370605 2.0 False 13.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4675 24.695 84.0 1225500.0 25 0 113130.0 + 26341 NSELGSETRY 10 117 578.2676154716208 1154.5206780100416 2 578.2678710818291 MULTI CID FTMS 0 0 0 4672 668484.75 0.1818890802297432 -4 0.2054290771484375 3 Unmodified _NSELGSETRY_ ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1 61.08992128646608 0.0337271188422265 1 [NS]E{I|L}GSETRY 10 0 + 72.791 0.0 0.0 6.3049 6.3049 84.994 0.0 0.0 0.0 54.4978990777704 4.805409669848146 4.805409669848146 5.655105025541118 0 1.0 1.3010299956639813 0.805462187404089 0.0 + + [NS]E{I|L}GSETRY;[NS]E{I|L}GSAA{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};[NS]E{I|L}GSAA{I|L}MY;[NS]E{I|L}G[QT]{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};[NS]E{I|L}GSE[HS][VP];[NS]E{I|L}G[QT]{I|L}MY;[NS]E{I|L}G[WR]{M(Oxidation (M))|F}{M(Oxidation (M))|F};[NS]E{I|L}G[WR]MY;[NS]E{I|L}G[WM]RY;[NS]E{I|L}SY{[QN]|[E{I|L}]|[KN]}[NS] 6.3049;5.8151;5.5691;5.2455;5.0248;4.9995;4.7632;4.5172;4.046;3.8051 +;-;-;-;-;-;-;-;-;- + 425 + 1 2.254 79582.2 1.0 1434 3239 4672 DOHH2_400M_050219_1,4675 DOHH2_400M_050219_1,4675,NSELGSETRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4676 24.697 99.0 417420.0 25 0 24220.0 + 42413 VTEIDQDKY 9 76 555.7694163962642 1109.5242798593283 2 555.7695800662041 MULTI CID FTMS 0 0 0 4672 472210.53125 0.0556821705291527 5 -0.16156005859375 4 Unmodified _VTEIDQDKY_ ENSG00000196924|ENST00000369850|FLNA;nc|ENSG00000196924|P21333-2|FLNA 70.33199760932243 0.0209706178985989 1 VTE{I|L}DQDKY 9 0 + 93.203 0.0 0.0 8.4002 8.4002 90.693 0.0 0.0 0.0 80.97902082560834 12.98332479720628 12.98332479720628 7.390442523041315 0 0.7742275032520141 2.0 0.7134679910804405 0.2742275032520141 + + VTE{I|L}DQDKY;VTE{I|L}ENDKY;VTE{I|L}D[AG]DKY;VTE{I|L}EGGDKY 8.4002;7.7341;7.5703;6.9042 +;-;-;- + 236 + 1 2.254 36810.1 1.0 1435 3239 4672 DOHH2_400M_050219_1,4676 DOHH2_400M_050219_1,4676,VTEIDQDKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4677 24.704 334.0 230630.0 25 0 17486.0 + 16086 ITQIEHEVSSS 11 110 615.3045795095437 1228.594606085887 2 615.3043090701103 MULTI CID FTMS 0 0 0 4672 214791.34375 0.904321421753296 -1 0.041360855102539 5 Unmodified _ITQIEHEVSSS_ CON__P35527;ENSG00000171403|ENST00000246662|KRT9 98.72992552434108 0.0003628247892426 1 [{I|L}T]Q{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VT{I|L}SSS 11 5 + 63.581 0.0 0.0 5.1751 5.1751 74.955 0.0 0.0 0.0 17.825160557860933 42.88554562118941 17.825160557860933 0.7403126772771884 0 1.805462187404089 1.6989700043360187 1.305462187404089 0.7302046884880938 [{I|L}T]Q{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VT{I|L}SSS;[{I|L}T]Q{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T{I|L}VSSS;[{I|L}T]Q{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TV{I|L}SSS;[{I|L}T]Q[HQ]QT{I|L}SSS;[{I|L}T]Q{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VTS{I|L}SS;[{I|L}T]Q{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T{I|L}WSS;[{I|L}T]Q{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TVS{I|L}SS;[{I|L}T]Q[HQ]QTS{I|L}SS;[{I|L}T]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QVT{I|L}SSS;[{I|L}T][AG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T{I|L}VSSS 5.1751;5.1148;4.8698;4.7427;4.6653;4.5599;4.36;4.2329;4.2132;4.1844 -;-;-;-;-;-;-;-;-;- 3670 1 2.254 60156.0 1.0 1436 3239 4672 DOHH2_400M_050219_1,4677 DOHH2_400M_050219_1,4677,ITQIEHEVSSS True True ITQIEHEVSSS 24.70353 615.30430907011 1230269.875 4672.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 9.164525349934896 2.0 True 11.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 4678 24.713 538.0 190250.0 25 0 27342.0 + 28274 PRIASNAGSIA 11 129 528.7945233232681 1055.574493713336 2 528.7941161990166 MULTI CID FTMS 0 0 0 4672 123841.0546875 0.6089681384254811 -1 0.041360855102539 6 Unmodified _PRIASNAGSIA_ ENSG00000125691|ENST00000479035|RPL23;ENST00000584583.1_1_17:37006387-37006753:-|nuORF 15.738622578938676 0.707765323811713 1 NAGSA{I|L} 6 7 31.498 0.0 0.0 2.9839 0.0 0.0 524.3036976544937 0.0 524.3036976544937 0.0 11.0401931076934 0.0 0.0 0 0.5317183090963749 0.0 0.5 0.0 NAGSA{I|L} 2.9839 - 234 1 2.254 80562.5 1.0 1437 3239 4672 DOHH2_400M_050219_1,4678 DOHH2_400M_050219_1,4678,PRIASNAGSIA False True PRIASNAGSIA 24.712988 528.794116199017 724802.875 4672.0 ENST00000584583.1_1_17:37006387-37006753:-|nuORF;;ENSG00000125691|ENST00000479035|RPL23 2.1646787325541177 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4680 24.719 195.0 212490.0 25 0 22048.0 -1 SGDCFADLAC 10 88 558.2094601214503 1114.4043673097003 2 558.2106201052666 MULTI CID FTMS 0 0 0 4679 77289.8828125 0.0176910526861817 13 -0.323282241821289 1 2 Carbamidomethyl (C) _SGDC(Carbamidomethyl (C))FADLAC(Carbamidomethyl (C))_ ENSG00000145147|ENST00000504154|SLIT2;nc|ENSG00000145147|O94813-2|SLIT2;nc|ENSG00000145147|O94813-3|SLIT2 9.38312468134398 0.6832340498775793 1 [SG]D 3 -1 21.739 0.0 0.0 1.9507 0.0 0.0 0.0 852.3087862604124 852.3087862604124 5.056131933420286 0.0 0.0 0.0 0 0.2742275032520141 0.8538719643217619 0.0 0.0 [SG]D 1.9507 + + 108 + 1 2.254 39440.8 1.0 1438 3240 4679 DOHH2_400M_050219_1,4680 DOHH2_400M_050219_1,4680,SGDCFADLAC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4681 24.724 298.0 299080.0 25 0 52163.0 -1 0 83 435.2203611496149 434.2130846830149 1 435.2213622927666 MULTI CID FTMS 0 0 0 4679 49318.61328125 0.3957210815587121 1 -0.0501899719238281 2 1 [VG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4 -1 + 12.899 0.0 0.0 2.9706 2.9706 67.822 0.0 0.0 0.0 0.5030511831139606 0.5030511831139606 0.5030511831139606 0.5030511831139606 0 0.0 1.5228787452803376 0.0 0.0 [VG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[TP]{[MS]|[{M(Oxidation (M))|F}A]};[PG][YV];[{M(Oxidation (M))|F}T][PA] 2.9706;2.8548;1.1962;0.21076 -;-;-;- 14 1 2.254 75856.9 1.0 1439 3240 4679 DOHH2_400M_050219_1,4681 DOHH2_400M_050219_1,4681, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4682 24.729 255.0 268810.0 25 0 27915.0 + 33098 SESKTVVTY 9 97 507.260985283236 1012.507417633272 2 507.2616149783134 MULTI CID FTMS 0 0 0 4679 149157.9375 0.5944317580634073 -2 0.0792713165283203 3 Unmodified _SESKTVVTY_ ENSG00000160223|ENST00000407780|ICOSLG;nc|ENSG00000160223|O75144-2|ICOSLG 36.12702656103203 0.0967173616627612 1 {[ES]|[DT]|[{I|L}C]}[KS]{[TV]|[{I|L}S]}VTY 9 0 {[ES]|[DT]|[{I|L}C]}[KS]{[TV]|[{I|L}S]}V + + 29.464 3.9693 0.54346 2.91 2.91 50.284 0.0 0.0 0.0 0.0 16.787887749990347 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 + + {[ES]|[DT]|[{I|L}C]}[KS]{[TV]|[{I|L}S]}VTY 2.91 + + 145 + 1 2.254 56073.6 1.0 1440 3240 4679 DOHH2_400M_050219_1,4682 DOHH2_400M_050219_1,4682,SESKTVVTY True True SESKTVVTY 24.72914 507.261614978313 1118750.5 4679.0 nc|ENSG00000160223|O75144-2|ICOSLG;;ENSG00000160223|ENST00000407780|ICOSLG 4.345541954040527 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4683 24.743 800.0 88364.0 25 0 8992.3 15742 IRSSHYSIVT 10 108 581.8162859349873 1161.6180189367744 2 581.8178588747978 MULTI CID FTMS 0 0 0 4679 86642.875 0.3478770390428981 -3 0.1264896392822265 4 Unmodified _IRSSHYSIVT_ ENST00000265107.8_1_5:37443467-37479979:+|nuORF 5.296884461304476 0.7021353017287152 1 {[MG]|[TS]}[RV]HYM[R{I|L}] 9 7 + 31.475 0.0 0.0 2.7096 2.7096 79.534 0.0 0.0 0.0 0.5184434196214802 9.792683588093295 0.5184434196214802 12.324229892291484 0 0.5 0.0 0.2215141619232908 0.2887254899964357 {[MG]|[TS]}[RV]HYM[R{I|L}];{[MG]|[TS]}[RV]{[NV]|[RG]}SM[R{I|L}];KY{I|L}[{M(Oxidation (M))|F}V][HC]PR;KY[{M(Oxidation (M))|F}V]{I|L}[HC]PR 2.7096;1.6486;1.1348;0.8757 -;-;-;- 176 1 2.254 58461.6 0.5 1441 3240 4679 DOHH2_400M_050219_1,4683 DOHH2_400M_050219_1,4683,IRSSHYSIVT False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4684 24.749 325.0 341660.0 25 0 27506.0 + 19899 LHRLPNFSL 9 148 366.21360965088513 1095.6189995528557 3 366.2136108279228 MULTI CID FTMS 0 0 0 4679 200976.65625 0.6552493125043365 -1 0.0379104614257812 5 Unmodified _LHRLPNFSL_ REV__ENSG00000136869|ENST00000355622|TLR4;REV__ENST00000490685.1_1_9:120470560-120471008:+|nuORF;REV__nc|ENSG00000136869|O00206-2|TLR4 21.53697664764585 0.2571576504437394 1 S{I|L} 2 -1 15.403 0.0 0.0 1.4058 0.0 0.0 877.4916477235571 0.0 877.4916477235571 0.0 3.413029202116844 0.0 0.0 0 0.0 0.0 0.2215141619232908 0.0 S{I|L} 1.4058 + + 106 + 1 2.254 88059.5 1.0 1442 3240 4679 DOHH2_400M_050219_1,4684 DOHH2_400M_050219_1,4684,LHRLPNFSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4685 24.754 268.0 281000.0 25 0 19764.0 -1 0 127 411.2232935903383 410.2160171237383 1 411.2245056033134 MULTI CID FTMS 0 0 0 4679 128305.015625 0.3606374625803631 -14 0.4223842620849609 6 1 [KT]Y 3 -1 [KT] + + 11.99 -1.5799 -0.68947 2.9228 2.9228 50.301 0.0 0.0 0.0 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 [KT]Y 2.9228 - 15 + 1 2.254 63267.5 1.0 1443 3240 4679 DOHH2_400M_050219_1,4685 DOHH2_400M_050219_1,4685, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4686 24.763 536.0 203160.0 25 0 30936.0 -1 LTATRPITKM 10 143 574.3295880829323 1146.6446232326646 2 574.3275634646416 MULTI CID FTMS 0 0 0 4679 126848.3125 1.0 0 0.0 7 Oxidation (M) _LTATRPITKM(Oxidation (M))_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 12.174745833636583 0.6432616012102976 1 [VG][RD][{I|L}V]{I|L}TTK 10 -1 46.112 0.0 0.0 4.0215 0.0 0.0 0.0 60.97432309127262 60.97432309127262 27.06615082423956 0.0 0.0 0.0 0 1.1643943297944483 2.0 1.424742501084005 0.0 [VG][RD][{I|L}V]{I|L}TTK 4.0215 - 473 1 2.254 85561.8 1.0 1444 3240 4679 DOHH2_400M_050219_1,4686 DOHH2_400M_050219_1,4686,LTATRPITKM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4688 24.768 1.5 38158000.0 25 0 4274600.0 + 35476 STMSTNGIPR 10 69 532.2633554821879 1062.5121580311757 2 532.2644531130791 MULTI CID FTMS 0 0 0 4687 46594844.0 0.9632372288311192 -2 0.0881004333496093 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 70.33199760932243 0.018925923965799 1 {[MG]|[TS]}MSTNG{I|L}RP 10 2 + 76.771 0.0 0.0 7.2254 7.2254 84.484 0.0 0.0 0.0 7.269987279362624 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.8494850021680094 0.0 0.3807196863200844 0.7302046884880937 {[MG]|[TS]}MSTNG{I|L}RP;{[MG]|[TS]}MSTNG{I|L}PR;{[MG]|[TS]}MSTGGG{I|L}RP;{[MG]|[TS]}MSTGGG{I|L}PR 7.2254;6.9421;6.3629;6.0796 -;+;-;- + 139 + 1 2.254 46669.9 1.0 1445 3241 4687 DOHH2_400M_050219_1,4688 DOHH2_400M_050219_1,4688,STMSTNGIPR True True STMSTNGIPR 24.767648 532.264453113079 441593568.0 4687.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 7.734360059102376 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4689 24.778 578.0 218130.0 25 0 13811.0 -1 ESQNKMWY 8 118 551.2374426959453 1100.4603324586906 2 551.2378417849541 MULTI CID FTMS 0 0 0 4687 95674.71875 0.7813379226267486 1 -0.0145168304443359 2 Oxidation (M) _ESQNKM(Oxidation (M))WY_ ENSG00000114656|ENST00000645291|CFAP92 5.760428011301431 0.7893668129297577 1 Y 1 -1 12.474 0.0 0.0 1.1335 0.0 0.0 919.3861117329078 0.0 919.3861117329078 0.0 2.1871398571591243 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1335 + + 75 + 1 2.254 99679.4 1.0 1446 3241 4687 DOHH2_400M_050219_1,4689 DOHH2_400M_050219_1,4689,ESQNKMWY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4691 24.782 120.0 352780.0 25 0 25226.0 -1 STMSTNGIPR 10 89 540.2612219530781 1078.507890972956 2 540.2613403201103 MULTI CID FTMS 0 0 0 4690 277965.15625 0.7570169012272088 1 -0.023599624633789 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 22.65808497894818 0.4596126414678359 1 [TA][R{I|L}]NTS{M(Oxidation (M))|F} 8 -1 43.873 0.0 0.0 4.0679 0.0 0.0 0.0 185.05559540094364 185.05559540094364 29.18994277904311 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.6643943297944485 0.0 [TA][R{I|L}]NTS{M(Oxidation (M))|F} 4.0679 - 164 1 2.254 39913.6 1.0 1447 3242 4690 DOHH2_400M_050219_1,4691 DOHH2_400M_050219_1,4691,STMSTNGIPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4692 24.789 346.0 370450.0 25 0 17340.0 + 7439 EGNPDTHSW 9 157 521.7147592572657 1041.4149655813312 2 521.7151977419853 MULTI CID FTMS 0 0 0 4690 379940.15625 0.5465802424357294 -3 0.1026172637939453 2 Unmodified _EGNPDTHSW_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 61.357469665136826 0.0253304979873734 1 {[DA]|[EG]}NPDTHSW 9 0 {[DA]|[EG]}N + + 42.389 19.747 6.58 4.0703 4.0703 53.406 0.0 0.0 0.0 0.0 9.438652556024678 0.0 0.0 0 0.3494850021680094 0.0 1.1549471895720984 0.0 + + {[DA]|[EG]}NPDTHSW 4.0703 + + 1161 + 1 2.254 105541.6 1.0 1448 3242 4690 DOHH2_400M_050219_1,4692 DOHH2_400M_050219_1,4692,EGNPDTHSW True True EGNPDTHSW 24.788679 521.715197741985 4398773.5 4690.0 nc|ENSG00000143569|Q14157-1|UBAP2L;;nc|ENSG00000143569|Q14157-4|UBAP2L;;nc|ENSG00000143569|Q14157-5|UBAP2L;;nc|ENSG00000143569|Q14157-3|UBAP2L;;ENSG00000143569|ENST00000428931|UBAP2L 8.139501253763834 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4693 24.791 126.0 507540.0 25 0 156090.0 + 45228 YRKPKWNHL 9 69 414.5683712040821 1240.683284212446 3 414.5681640505791 MULTI CID FTMS 0 0 0 4690 230079.234375 1.0 0 0.0 3 Unmodified _YRKPKWNHL_ ENSG00000134824|ENST00000278840|FADS2;ENST00000520145.1_1_11:61608131-61615310:+|nuORF;nc|ENSG00000134824|O95864-2|FADS2;nc|ENSG00000134824|O95864-3|FADS2;nc|ENSG00000134824|O95864-4|FADS2 21.53697664764585 0.2571576504437394 1 H{I|L} 2 7 20.445 0.0 0.0 1.6479 0.0 0.0 972.5290616556086 0.0 972.5290616556086 0.0 17.284700126913393 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + H{I|L} 1.6479 + + 37 + 1 2.254 54799.2 1.0 1449 3242 4690 DOHH2_400M_050219_1,4693 DOHH2_400M_050219_1,4693,YRKPKWNHL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4694 24.801 576.0 209050.0 25 0 49465.0 + 30002 QTETKTITY 9 140 542.7796803491652 1083.5448077651304 2 542.7808715701103 MULTI CID FTMS 0 0 0 4690 112877.9609375 0.8750836873731668 -1 0.0145168304443359 4 Unmodified _QTETKTITY_ ENSG00000079819|ENST00000337057|EPB41L2;ENST00000452150.6_1_6:131179278-131188835:-|nuORF;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2 18.1463463914782 0.3454829746528889 1 TY 2 7 24.222 0.0 0.0 2.2354 0.0 0.0 801.4226901912906 0.0 801.4226901912906 0.0 7.843865956335488 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + TY 2.2354 + + 1028 + 1 2.254 96897.8 1.0 1450 3242 4690 DOHH2_400M_050219_1,4694 DOHH2_400M_050219_1,4694,QTETKTITY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4696 24.807 181.0 408100.0 25 0 69800.0 + 5231 DIYSKKTL 8 83 484.276463754826 966.538374576452 2 484.2766296267509 MULTI CID FTMS 0 0 0 4695 438758.5 0.3090536888937413 5 -0.1687660217285156 1 Unmodified _DIYSKKTL_ ENSG00000173473|ENST00000254480|SMARCC1;ENST00000483847.1_1_3:47712102-47719818:-|nuORF 39.94969957227396 0.2351327405675156 1 D{I|L}YSKKT{I|L} 8 0 + 74.572 0.0 0.0 7.7153 7.7153 97.62 0.0 0.0 0.0 37.694645341325696 11.875857721415912 11.875857721415912 69.8179850002657 0 0.4247425010840047 2.0 0.6861818737241735 0.0 + + D{I|L}YSKKT{I|L};[{M(Oxidation (M))|F}V]{I|L}T[RK]{[CT]|[{M(Oxidation (M))|F}G]};{[{M(Oxidation (M))|F}C]|[YS]}KK[VP][{M(Oxidation (M))|F}V] 7.7153;0.49183;0.34535 +;-;- + 219 + 1 2.254 63182.7 1.0 1451 3243 4695 DOHH2_400M_050219_1,4696 DOHH2_400M_050219_1,4696,DIYSKKTL False True DIYSKKTL 24.807015 484.276629626751 14099858.0 4695.0 ENST00000483847.1_1_3:47712102-47719818:-|nuORF;;ENSG00000173473|ENST00000254480|SMARCC1 5.171657721201579 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4697 24.813 309.0 275800.0 25 0 65075.0 + 37439 TLDGDELLQ 9 114 502.2488598364771 0 502.2508422732353 PEAK CID FTMS 0 0 0 4695 102524.1015625 0.5426338398544628 26 -0.8052425384521484 2 Unmodified _TLDGDELLQ_ REV__ENSG00000125257|ENST00000645237|ABCC4;REV__nc|ENSG00000125257|O15439-2|ABCC4;REV__nc|ENSG00000125257|O15439-3|ABCC4;REV__nc|ENSG00000125257|O15439-4|ABCC4 14.838274106304384 0.2567717476666951 1 E 1 -1 3.0989 0.0 0.0 0.30913 0.0 0.0 788.3508558040105 82.06698023013905 870.4178360341496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.30913 + + 17 + 1 2.254 72661.8 1.0 1452 3243 4695 DOHH2_400M_050219_1,4697 DOHH2_400M_050219_1,4697,TLDGDELLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4698 24.815 136.0 647470.0 25 0 47787.0 + 35670 SVDPTQTEY 9 110 520.2327213801005 1038.450889827001 2 520.2333251833916 MULTI CID FTMS 0 0 0 4695 503390.96875 0.184655514903387 -8 0.3316459655761719 3 Unmodified _SVDPTQTEY_ ENSG00000009307|ENST00000358528|CSDE1;ENST00000483030.1_1_1:115263111-115268953:-|nuORF;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 15.847184025352805 0.4077185912009129 1 [VS]D 3 6 20.546 0.0 0.0 1.9785 0.0 0.0 0.0 734.2995586104572 734.2995586104572 0.836487129679707 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [VS]D 1.9785 + + 387 1 2.254 68250.9 1.0 1453 3243 4695 DOHH2_400M_050219_1,4698 DOHH2_400M_050219_1,4698,SVDPTQTEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4699 24.823 416.0 208090.0 25 0 33439.0 + 6627 AESTSSRML 9 105 491.236857617153 980.459162301106 2 491.2368041872978 MULTI CID FTMS 0 0 0 4695 89854.390625 0.8708068046325675 1 -0.0353431701660156 4 Unmodified _EASQLDRY_ ENSG00000093009|ENST00000263201|CDC45;nc|ENSG00000093009|O75419-2|CDC45;nc|ENSG00000093009|O75419-3|CDC45 21.74664581756881 0.5868176546531598 1 {[CP]|[EA]}STS 5 5 26.823 0.0 0.0 2.7357 0.0 0.0 0.0 502.2480562799438 502.2480562799438 14.832881222565248 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {[CP]|[EA]}STS 2.7357 - 106 + 1 2.254 72384.2 1.0 1454 3243 4695 DOHH2_400M_050219_1,4699 DOHH2_400M_050219_1,4699,EASQLDRY False False AESTSSRML 24.822833 491.236804187298 552970.5 4695.0 ENSG00000093009|ENST00000263201|CDC45;;nc|ENSG00000093009|O75419-2|CDC45;;nc|ENSG00000093009|O75419-3|CDC45 4.810468355814616 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4700 24.837 800.0 167660.0 25 0 17977.0 + 24350 MENIHSEMY 9 152 585.2332661948973 1168.4519794565945 2 585.2333251833916 MULTI CID FTMS 0 0 0 4695 161910.34375 0.9444566526593732 -1 0.023599624633789 5 Oxidation (M) _MENIHSEM(Oxidation (M))Y_ ENSG00000171848|ENST00000304567|RRM2;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 55.23464941255904 0.0288927259679799 1 MEN{I|L}HSE{M(Oxidation (M))|F}Y 9 0 + 74.025 0.0 0.0 6.3353 6.3353 89.215 0.0 0.0 0.0 56.04247971287453 14.973024840566469 14.973024840566469 9.208187539523747 0 2.223197507588033 2.0 0.2742275032520141 0.0 + + MEN{I|L}HSE{M(Oxidation (M))|F}Y;MEGG{I|L}HSE{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{I|L}HSE{M(Oxidation (M))|F}Y;MEN{I|L}P{[QC]|[C(Carbamidomethyl (C))A]}[{M(Oxidation (M))|F}T]S;MEN[WD]A{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};MENWW{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};MENMT{[WT]|[RM]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GG{I|L}HSE{M(Oxidation (M))|F}Y;MEN[WD][QT][{M(Oxidation (M))|F}V];MENM{[CT]|[{M(Oxidation (M))|F}G]}[PS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.3353;5.5473;3.5828;3.0859;3.0155;2.9763;2.8648;2.7948;2.7427;2.7427 +;-;+;-;-;-;-;-;-;- + 3079 + 1 2.254 105839.6 0.7099999785423279 1455 3243 4695 DOHH2_400M_050219_1,4700 DOHH2_400M_050219_1,4700,MENIHSEMY True False MENIHSEMY 24.836667 585.233325183392 856389.1875 4695.0 ENSG00000171848|ENST00000304567|RRM2;;nc|ENSG00000171848|P31350-2|RRM2;;ENST00000491447.1_1_2:10262886-10264978:+|nuORF 10.036359469095864 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4702 24.845 284.0 213330.0 25 0 33369.0 + -1 LDEKRVTM 8 90 504.2645080076305 0 504.2643005251884 PEAK CID FTMS 0 0 0 4701 101171.671875 0.2387186148909837 60 -2.222900390625 1 Oxidation (M) _LDEKRVTM(Oxidation (M))_ REV__ENSG00000169258|ENST00000303991|GPRIN1;REV__nc|ENSG00000169258|Q7Z2K8-2|GPRIN1 14.838274106304384 0.487171416001894 1 VR 2 -1 12.206 0.0 0.0 1.2127 0.0 0.0 266.0960193338173 482.2246518740093 748.3206712078266 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 VR 1.2127 - 14 + 1 2.237 49782.3 1.0 1456 3244 4701 DOHH2_400M_050219_1,4702 DOHH2_400M_050219_1,4702,LDEKRVTM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4703 24.85 257.0 252230.0 25 0 19566.0 38495 TSHSTLSYT 9 110 498.7353677714853 995.4561826097706 2 498.7353393435478 MULTI CID FTMS 0 0 0 4701 193346.703125 0.6575839033741606 -2 0.0589427947998046 2 Unmodified _TSHSTLSYT_ ENSG00000169894|ENST00000379458|MUC3A;nc|ENSG00000169894|Q02505-2|MUC3A;nc|ENSG00000169894|Q02505-3|MUC3A;nc|ENSG00000169894|Q02505-4|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A 57.47134341890925 0.0274820932774257 1 {I|L}CKSTY 6 6 42.268 0.0 0.0 4.2461 0.0 0.0 282.12123495527686 0.0 282.12123495527686 0.0 17.904557560511893 0.0 0.0 0 0.6549471895720985 0.0 0.8807196863200843 0.0 {I|L}CKSTY 4.2461 - 398 + 1 2.237 54692.5 1.0 1457 3244 4701 DOHH2_400M_050219_1,4703 DOHH2_400M_050219_1,4703,TSHSTLSYT True False TSSSHTLTY 24.850183 498.735339343548 1403357.375 4701.0 nc|ENSG00000156642|Q9Y639-4|NPTN;;nc|ENSG00000156642|Q9Y639-5|NPTN;;nc|ENSG00000156642|Q9Y639-3|NPTN;;ENSG00000156642|ENST00000345330|NPTN;;nc|ENSG00000156642|Q9Y639-1|NPTN;;ENST00000563753.1_1_15:73884305-73925556:-|nuORF 4.881040811538696 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4704 24.858 429.0 251950.0 25 0 14083.0 + 25832 NLDKNTVGY 9 141 512.25913764151 1022.50372234982 2 512.2585327029228 MULTI CID FTMS 0 0 0 4701 150892.609375 0.0823479479676278 -7 0.2501392364501953 3 Unmodified _NLDKNTVGY_ ENSG00000007923|ENST00000377577|DNAJC11;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;nc|ENSG00000007923|Q9NVH1-3|DNAJC11 66.45667989310934 0.0225072657982126 1 {[QV]|[N{I|L}]|[RA]|[KV]}SRSQ 6 7 50.024 0.0 0.0 4.8923 0.0 0.0 0.0 334.14160903914177 334.14160903914177 31.54173243567084 0.0 0.0 0.0 0 0.5 2.0 1.4634679910804405 0.8962566630072955 {[QV]|[N{I|L}]|[RA]|[KV]}SRSQ 4.8923 - 2940 1 2.237 86728.3 1.0 1458 3244 4701 DOHH2_400M_050219_1,4704 DOHH2_400M_050219_1,4704,NLDKNTVGY True True NLDKNTVGY 24.857831 512.258532702923 17754850.0 4701.0 nc|ENSG00000007923|Q9NVH1-3|DNAJC11;;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;;ENSG00000007923|ENST00000377577|DNAJC11 7.025304953257243 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4706 24.865 256.0 211590.0 25 0 15304.0 + 8843 EYVSSQLGRP 10 93 568.2923203557657 1134.5700877783313 2 568.2924072146416 MULTI CID FTMS 0 0 0 4705 255067.921875 0.2811968955861156 -8 0.2713584899902344 1 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 17.11289562659939 0.5604042439455784 1 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR 8 -1 44.703 0.0 0.0 3.9401 0.0 0.0 244.1410777822907 0.0 244.1410777822907 0.0 26.977047447533465 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.3807196863200844 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR 3.9401 - 170 + 1 2.237 46459.3 1.0 1459 3245 4705 DOHH2_400M_050219_1,4706 DOHH2_400M_050219_1,4706,EYVSSQLGRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4707 24.879 800.0 67997.0 25 0 9248.9 -1 0 54 1123.367638108682 2244.7207232841643 2 1123.366259753704 MULTI CID FTMS 0 0 0 4705 71039.4296875 0.2343362985024408 -15 0.458108901977539 2 1 G 1 -1 3.9794 0.0 0.0 0.17728 0.0 0.0 1158.2509489695142 1026.4489229791627 2184.699871948677 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.17728 - 10 + 1 2.237 50353.5 0.4600000083446502 1460 3245 4705 DOHH2_400M_050219_1,4707 DOHH2_400M_050219_1,4707, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4708 24.893 800.0 86495.0 25 0 8648.9 + 45301 YSESNKAIY 9 107 537.7580538713618 1073.5015548095234 2 537.7576171755791 MULTI CID FTMS 0 0 0 4705 84241.5546875 0.3750889725518243 5 -0.1285438537597656 3 Unmodified _YSESNKAIY_ ENSG00000140471|ENST00000314742|LINS1;ENST00000559149.5_1_15:101113500-101121059:-|nuORF;nc|ENSG00000140471|Q8NG48-2|LINS1;nc|ENSG00000140471|Q8NG48-3|LINS1 24.020572477871973 0.2255576514309169 1 SY{I|L}Y 4 6 33.721 0.0 0.0 3.1412 0.0 0.0 529.2505360334 0.0 529.2505360334 0.0 21.062221233927417 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 SY{I|L}Y 3.1412 - 84 1 2.237 60988.5 0.5099999904632568 1461 3245 4705 DOHH2_400M_050219_1,4708 DOHH2_400M_050219_1,4708,YSESNKAIY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4709 24.9 434.0 155370.0 25 0 9816.8 + 19361 LEQEHTQGF 9 105 544.7543093733062 1087.4940658134124 2 544.7549316287041 MULTI CID FTMS 0 0 0 4705 140250.875 1.0 0 0.0 4 Unmodified _LEQEHTQGF_ ENSG00000108384|ENST00000337432|RAD51C;ENST00000475762.5_1_17:56772326-56801433:+|nuORF;ENST00000487921.5_1_17:56769962-56783250:+|nuORF;nc|ENSG00000108384|O43502-2|RAD51C 37.97399986684836 0.0865783450051559 1 {I|L}E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PYY{M(Oxidation (M))|F} 8 4 + 45.227 0.0 0.0 4.1588 4.1588 77.158 0.0 0.0 0.0 18.80001899740286 3.460696996448576 3.460696996448576 5.440680443502757 0 0.3807196863200844 2.0 0.3807196863200844 0.4247425010840047 {I|L}E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PYY{M(Oxidation (M))|F};{I|L}E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P[Y{M(Oxidation (M))|F}]Y 4.1588;3.6585 -;- 182 + 1 2.237 54349.5 1.0 1462 3245 4705 DOHH2_400M_050219_1,4709 DOHH2_400M_050219_1,4709,LEQEHTQGF True True LEQEHTQGF 24.900272 544.754931628704 649892.4375 4705.0 ENST00000487921.5_1_17:56769962-56783250:+|nuORF;;nc|ENSG00000108384|O43502-2|RAD51C;;ENSG00000108384|ENST00000337432|RAD51C;;ENST00000475762.5_1_17:56772326-56801433:+|nuORF 5.33002233505249 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4710 24.913 732.0 218590.0 25 0 14627.0 -1 0 203 380.1844291551309 379.1771526885309 1 381.1753112673759 MULTI CID FTMS 0 0 0 4705 88208.1015625 1.0 0 0.0 5 1 Y 1 -1 12.218 0.0 0.0 3.2224 0.0 0.0 198.102916703959 0.0 198.102916703959 0.0 1.940900856914407 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.2224 - 15 + 1 2.237 128895.5 1.0 1463 3245 4705 DOHH2_400M_050219_1,4710 DOHH2_400M_050219_1,4710, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4712 24.92 239.0 265870.0 25 0 22698.0 + 793 AESLQPKGY 9 91 496.75646015099375 991.4983673687876 2 496.7563049197197 MULTI CID FTMS 0 0 0 4711 210872.4375 0.4228867485122484 2 -0.0569095611572265 1 Unmodified _AESLQPKGY_ ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP 52.268347100219714 0.0353964759249114 1 {[CP]|[EA]}S{I|L}QPKGY 9 0 + 48.527 0.0 0.0 4.8944 4.8944 84.027 0.0 0.0 0.0 36.05320000950151 8.830080363116721 8.830080363116721 9.208187539523747 0 0.9247425010840048 0.0 0.0 0.5 + + {[CP]|[EA]}S{I|L}QPKGY;{[CP]|[EA]}S{I|L}[AG]PKGY;{[CP]|[EA]}S{I|L}Q[YK][PG];{[CP]|[EA]}S{I|L}QP[PG]{[HG]|PP};{[CP]|[EA]}S{I|L}[AG][YK][PG];{[CP]|[EA]}S{I|L}[AG]P[PG]{[HG]|PP} 4.8944;3.9656;3.5926;3.0954;2.6638;1.6668 +;-;-;-;-;- + 135 + 1 2.237 50906.2 1.0 1464 3246 4711 DOHH2_400M_050219_1,4712 DOHH2_400M_050219_1,4712,AESLQPKGY True True AESLQPKGY 24.919858 496.75630491972 5604461.0 4711.0 nc|ENSG00000080603|Q6ZRS2-3|SRCAP;;ENSG00000080603|ENST00000262518|SRCAP;;nc|ENSG00000080603|Q6ZRS2-2|SRCAP 8.281700452168783 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4713 24.923 187.0 277040.0 25 0 33874.0 + 38476 TSDNGKDGLAY 11 89 570.7617988788351 1139.50904482447 2 570.7621337771416 MULTI CID FTMS 0 0 0 4711 275116.53125 0.1014488713753728 -7 0.2380733489990234 2 Unmodified _TSDNGKDGLAY_ ENSG00000105325|ENST00000441788|FZR1;nc|ENSG00000105325|Q9UM11-3|FZR1;nc|ENSG00000105325|Q9UM11|FZR1 40.72490554402381 0.2012291192650359 1 {[MG]|[TS]}DN{[VA]|[{I|L}G]}{[WN]|[YH]}AY 10 4 {[MG]|[TS]} + + 32.268 6.338 3.3699 2.8317 2.8317 50.128 0.0 0.0 0.0 0.0 20.48515724208036 0.0 0.0 0 1.6861818737241734 0.0 0.0 0.0 {[MG]|[TS]}DN{[VA]|[{I|L}G]}{[WN]|[YH]}AY 2.8317 - 360 + 1 2.237 45925.3 1.0 1465 3246 4711 DOHH2_400M_050219_1,4713 DOHH2_400M_050219_1,4713,TSDNGKDGLAY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4714 24.932 506.0 206340.0 25 0 12349.0 + 10646 FVQLCPYKGQG 11 107 620.3130774713335 1238.6116020094669 2 620.3130981326103 MULTI CID FTMS 0 0 0 4711 175691.703125 0.3079672261033393 26 -0.7673454284667969 3 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 1 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 78.12 12.095 3.053 6.307 6.307 61.37 0.0 0.0 0.0 0.0 52.35519263924852 0.0 0.0 0 2.774227503252014 0.0 0.0 1.5743923658886183 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 6.307 - 2157 + 1 2.237 80826.3 1.0 1466 3246 4711 DOHH2_400M_050219_1,4714 DOHH2_400M_050219_1,4714,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4715 24.946 800.0 111100.0 25 0 6444.6 + + 6159 ASENNGGEGIHY 12 126 624.2675582194731 1246.5205635057462 2 624.2673217654228 MULTI CID FTMS 0 0 0 4711 88628.8046875 0.846016662322665 -5 0.149972915649414 4 Unmodified _DTANSFFELCT_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 12.240655878213236 0.7805268987462184 1 NNGWG{I|L}HY 8 -1 46.351 0.0 0.0 3.7184 0.0 0.0 287.1108348407513 0.0 287.1108348407513 0.0 27.476700644068472 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 NNGWG{I|L}HY 3.7184 - 619 + 1 2.237 72082.1 0.5199999809265137 1467 3246 4711 DOHH2_400M_050219_1,4715 DOHH2_400M_050219_1,4715,DTANSFFELCT False False ASENNGGEGIHY 24.946247 624.267321765423 569568.8125 4711.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 5.626892725626628 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4716 24.948 72.0 820310.0 25 0 95620.0 + -1 LTMRFPRP 8 85 517.2852793069982 1032.5560056807965 2 517.2855102419853 MULTI CID FTMS 0 0 0 4711 892717.0 0.427097573933909 12 -0.3429412841796875 5 Oxidation (M) _LTM(Oxidation (M))RFPRP_ REV__ENSG00000156050|ENST00000286544|FAM161B;REV__nc|ENSG00000156050|Q96MY7-2|FAM161B 4.75600775471527 0.7954636275367004 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.237 53406.7 1.0 1468 3246 4711 DOHH2_400M_050219_1,4716 DOHH2_400M_050219_1,4716,LTMRFPRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4717 24.952 214.0 338200.0 25 0 27955.0 + 13799 HTDILKEKY 9 96 382.8767010252882 1145.6082736760643 3 382.8765746951103 MULTI CID FTMS 0 0 0 4711 180450.875 0.5342947087740622 -7 0.2380733489990234 6 Unmodified _HTDILKEKY_ ENSG00000104047|ENST00000403028|DTWD1;nc|ENSG00000104047|Q8N5C7-2|DTWD1 32.89776655970281 0.1144444835665315 1 Y[R{M(Oxidation (M))|F}]{I|L}KEK 7 5 40.818 0.0 0.0 3.563 0.0 0.0 0.0 178.05127893619377 178.05127893619377 27.322675494693065 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.6643943297944485 0.0 Y[R{M(Oxidation (M))|F}]{I|L}KEK 3.563 - 161 + 1 2.237 61452.6 1.0 1469 3246 4711 DOHH2_400M_050219_1,4717 DOHH2_400M_050219_1,4717,HTDILKEKY True True HTDILKEKY 24.952004 382.87657469511 1781826.75 4711.0 ENSG00000104047|ENST00000403028|DTWD1;;nc|ENSG00000104047|Q8N5C7-2|DTWD1 5.748032887776692 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4719 24.958 72.0 875900.0 25 0 91654.0 + 26342 NSELGSETRY 10 82 578.2676154716208 1154.5206780100416 2 578.2676269412041 MULTI CID FTMS 0 0 0 4718 726887.3125 0.197779926469968 4 -0.050384521484375 1 Unmodified _NSELGSETRY_ ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1 67.08073823543168 0.0190306485248484 1 NSE{I|L}GSERTY 10 2 + 83.146 0.0 0.0 7.2018 7.2018 94.185 0.0 0.0 0.0 71.72582115752506 6.777807052660805 6.777807052660805 15.942346538160066 0 1.0 1.2218487496163564 0.805462187404089 0.0 NSE{I|L}GSERTY;NSE{I|L}GSE[HS][VP];NSE{I|L}G[WR]MY;NSE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ERTY;NSE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RV]MY;NSE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[HS][VP];NS[W{I|L}]WWTY 7.2018;5.8209;5.7694;4.9428;4.1453;3.5582;2.846 -;-;-;-;-;-;- 188 + 1 2.244 54081.5 1.0 1470 3247 4718 DOHH2_400M_050219_1,4719 DOHH2_400M_050219_1,4719,NSELGSETRY True True NSELGSETRY 24.957595 578.267626941204 34637312.0 4718.0 nc|ENSG00000163374|Q9H869-6|YY1AP1;;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;;nc|ENSG00000163374|Q9H869-8|YY1AP1;;nc|ENSG00000163374|Q9H869|YY1AP1;;nc|ENSG00000163374|Q9H869-9|YY1AP1;;ENSG00000163374|ENST00000355499|YY1AP1;;nc|ENSG00000163374|Q9H869-4|YY1AP1;;nc|ENSG00000163374|Q9H869-7|YY1AP1;;nc|ENSG00000163374|Q9H869-5|YY1AP1;;nc|ENSG00000163374|Q9H869-3|YY1AP1;;ENST00000442834.6_1_1:155629450-155640310:-|nuORF 7.34005880355835 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4720 24.965 417.0 212350.0 25 0 21595.0 + 31423 RPMKTSVL 8 119 466.27336571562427 930.5321784980486 2 466.2733642458916 MULTI CID FTMS 0 0 0 4718 74841.8828125 0.5141034215133929 -2 0.094482421875 2 Unmodified _RPMKTSVL_ nc|ENSG00000189266|Q9NPJ4-2|PNRC2 37.97399986684836 0.2681860861828418 1 S[EP]KTSV{I|L} 8 2 39.443 0.0 0.0 4.2388 0.0 0.0 71.07426650215 0.0 71.07426650215 0.0 27.849490893123843 0.0 0.0 0 0.6989700043360187 0.0 1.1307196863200843 0.0 S[EP]KTSV{I|L} 4.2388 - 238 1 2.244 72185.5 1.0 1471 3247 4718 DOHH2_400M_050219_1,4720 DOHH2_400M_050219_1,4720,RPMKTSVL False True RPMKTSVL 24.96502 466.273364245892 895271.875 4718.0 nc|ENSG00000189266|Q9NPJ4-2|PNRC2 4.5024573802948 2.0 True 8.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4721 24.967 82.0 854740.0 25 0 166170.0 + -1 SVCGMSMSPY 10 81 539.2060355295222 1076.3975181258445 2 539.2062255740166 MULTI CID FTMS 0 0 0 4718 448745.0625 0.7409457089277304 -7 0.2393512725830078 3 Oxidation (M) _SVCGM(Oxidation (M))SMSPY_ REV__L1PB1_dup10052|chr12:47254957-47257203:+|1.548341044108226|0.3758641288713036|2.04|48.0|85|1|anti-sense 6.723162845929126 0.6955379296933136 1 [VS]D 3 -1 24.041 0.0 0.0 2.2335 0.0 0.0 0.0 772.2478958936755 772.2478958936755 1.210149894766701 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [VS]D 2.2335 - 110 1 2.244 57319.2 1.0 1472 3247 4718 DOHH2_400M_050219_1,4721 DOHH2_400M_050219_1,4721,SVCGMSMSPY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4722 24.97 143.0 444380.0 25 0 35157.0 + 35231 SSDRTITEY 9 81 536.2508754350379 1070.4871979368756 2 536.2512695193291 MULTI CID FTMS 0 0 0 4718 357839.3125 0.7473684973125141 -4 0.1510448455810547 4 Unmodified _SSDRTITEY_ ENSG00000100994|ENST00000216962|PYGB;ENST00000471359.1_1_20:25274602-25277155:+|nuORF 31.26834338654808 0.1333407332142048 1 T{I|L}TEY 5 4 44.182 0.0 0.0 4.1273 0.0 0.0 445.1934986798844 0.0 445.1934986798844 0.0 31.70818753952375 0.0 0.0 0 0.8252574989159953 0.0 0.4247425010840047 0.0 + T{I|L}TEY 4.1273 + + 250 1 2.244 55395.2 1.0 1473 3247 4718 DOHH2_400M_050219_1,4722 DOHH2_400M_050219_1,4722,SSDRTITEY False True SSDRTITEY 24.969766 536.251269519329 2269428.0 4718.0 ENSG00000100994|ENST00000216962|PYGB;;ENST00000471359.1_1_20:25274602-25277155:+|nuORF 4.385683139165242 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4724 24.978 325.0 271260.0 25 0 60404.0 -1 0 75 435.2203611496149 434.2130846830149 1 435.2208129763603 MULTI CID FTMS 0 0 0 4723 69333.7578125 0.5563179457951886 9 -0.2523384094238281 1 1 [VG]PY 4 -1 + 20.094 0.0 0.0 4.6276 4.6276 77.903 0.0 0.0 0.0 4.490925311194186 4.490925311194186 4.490925311194186 4.490925311194186 0 0.1677353201839438 1.6989700043360187 0.0 0.0 [VG]PY;[PG]VY;[YG][VP] 4.6276;3.5934;0.6163 -;-;- 9 1 2.244 74113.1 1.0 1474 3248 4723 DOHH2_400M_050219_1,4724 DOHH2_400M_050219_1,4724, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4725 24.982 204.0 313790.0 25 0 71171.0 -1 0 93 488.2692988904733 487.2620224238733 1 488.2693969607353 MULTI CID FTMS 0 0 0 4723 270833.53125 0.369339741202696 29 -0.9661483764648438 2 1 {[QD]|[EN]|[WG]|[KD]|[RS]}P 3 -1 3.2885 0.0 0.0 0.67489 0.0 0.0 0.0 144.06641020147018 144.06641020147018 3.288493772929048 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}P 0.67489 - 11 1 2.244 57431.0 1.0 1475 3248 4723 DOHH2_400M_050219_1,4725 DOHH2_400M_050219_1,4725, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4728 25.002 800.0 167890.0 25 0 12036.0 + 702 AENQTVVKY 9 161 526.2738890074659 1050.5332250817316 2 526.2739135622978 MULTI CID FTMS 0 0 0 4727 138627.1875 0.7518273386952442 1 -0.0163230895996093 1 Unmodified _AENQTVVKY_ ENSG00000030066|ENST00000378460|NUP160;ENST00000527126.1_1_11:47843172-47843701:-|nuORF;nc|ENSG00000030066|Q12769-3|NUP160;nc|ENSG00000030066|Q12769|NUP160 76.82478488871298 0.0184607444814265 1 {[CP]|[EA]}NQTVVKY 9 0 + 77.687 0.0 0.0 7.395 7.395 89.73 0.0 0.0 0.0 13.530364355016571 8.1954393554187 8.1954393554187 8.1954393554187 0 1.4559771852360797 0.638272163982407 0.3807196863200844 1.2302046884880935 + + {[CP]|[EA]}NQTVVKY;{[CP]|[EA]}NQTVVYK;{[CP]|[EA]}N[AG]TVVKY;{[CP]|[EA]}GGQTVVKY;{[CP]|[EA]}GGQTVVYK;{[CP]|[EA]}N[AG]TVVYK;{[CP]|[EA]}GG[AG]TVVKY;{[CP]|[EA]}GG[AG]TVVYK;{[CP]|[EA]}NKT[TP]KY;{[CP]|[EA]}NKT[TP]YK 7.395;6.6148;6.5184;6.5184;5.7383;5.7383;5.6461;4.866;3.7444;2.9642 +;-;-;-;-;-;-;-;-;- + 909 + 1 2.244 106751.5 0.7799999713897705 1476 3250 4727 DOHH2_400M_050219_1,4728 DOHH2_400M_050219_1,4728,AENQTVVKY True True AENQTVVKY 25.002457 526.273913562298 951183.1875 4727.0 ENST00000527126.1_1_11:47843172-47843701:-|nuORF;;nc|ENSG00000030066|Q12769-3|NUP160;;nc|ENSG00000030066|Q12769|NUP160;;ENSG00000030066|ENST00000378460|NUP160 7.3094150225321455 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4731 25.016 413.0 219620.0 25 0 28701.0 + 45294 YSEGYPGQRY 10 93 610.2722736758006 1218.5299944184012 2 610.2720214724541 MULTI CID FTMS 0 0 0 4730 114102.71875 0.0409141416934841 -5 0.0544261932373046 1 Unmodified _YSEGYPGQRY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 49.55428908609986 0.0827668555218455 1 YSEGYPT 7 4 72.823 0.0 0.0 5.9763 0.0 0.0 0.0 418.18183313541255 418.18183313541255 59.66267623885016 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 YSEGYPT 5.9763 - 219 + 1 2.244 72062.1 1.0 1477 3252 4730 DOHH2_400M_050219_1,4731 DOHH2_400M_050219_1,4731,YSEGYPGQRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4732 25.022 315.0 215030.0 25 0 13784.0 -1 0 117 425.20225186663725 424.19497540003726 1 425.2016784548759 MULTI CID FTMS 0 0 0 4730 188340.1875 0.2046845980603806 10 -0.3843326568603515 2 1 HY 2 -1 16.696 0.0 0.0 3.9359 0.0 0.0 106.06339688616852 0.0 106.06339688616852 0.0 7.426565406032175 0.0 0.0 0 0.1747425010840047 0.0 0.0 0.0 HY 3.9359 - 18 + 1 2.244 62664.5 1.0 1478 3252 4730 DOHH2_400M_050219_1,4732 DOHH2_400M_050219_1,4732, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4733 25.036 800.0 94939.0 25 0 5569.4 + 36829 TELEFLTQF 9 137 564.2862707599219 0 564.2860595583916 PEAK CID FTMS 0 0 0 4730 86717.625 0.9352041703569796 2 -0.0673122406005859 3 Unmodified _TELEFLTQF_ REV__ENSG00000064607|ENST00000452918|SUGP2;REV__ENST00000598240.1_1_19:19105804-19136912:-|nuORF;REV__nc|ENSG00000064607|Q8IX01-3|SUGP2;REV__nc|ENSG00000064607|Q8IX01-4|SUGP2 3.944395688203298 0.3444685223463734 1 C(Carbamidomethyl (C)) 1 -1 3.4949 0.0 0.0 0.31022 0.0 0.0 836.4570192036343 127.04046045474844 963.4974796583828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.31022 - 12 + 1 2.244 61860.5 0.6100000143051147 1479 3252 4730 DOHH2_400M_050219_1,4733 DOHH2_400M_050219_1,4733,TELEFLTQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4735 25.041 20.0 2392200.0 25 0 213220.0 + 35477 STMSTNGIPR 10 69 532.2633554821879 1062.5121580311757 2 532.2639648318291 MULTI CID FTMS 0 0 0 4734 2476516.25 0.0511960647363737 10 -0.374887466430664 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 61.60191391372663 0.0323840705564037 1 {[MG]|[TS]}MSTNG{I|L}RP 10 2 + 71.564 0.0 0.0 6.7354 6.7354 83.858 0.0 0.0 0.0 7.269987279362624 3.357921019231938 3.357921019231938 3.357921019231938 0 0.7887254899964358 0.0 0.3494850021680094 0.3807196863200844 {[MG]|[TS]}MSTNG{I|L}RP;{[MG]|[TS]}MSTNG{I|L}PR;{[MG]|[TS]}MSTGGG{I|L}RP;{[MG]|[TS]}MSTGGG{I|L}PR;{[MG]|[TS]}[VS][C(Carbamidomethyl (C))S]G{I|L}RP;{[MG]|[TS]}[VS][C(Carbamidomethyl (C))S]G{I|L}PR;{[MG]|[TS]}M[{I|L}V][YN][HV] 6.7354;6.4194;5.8729;5.5568;2.7228;2.4068;0.61458 -;+;-;-;-;-;- + 145 + 1 2.244 43203.8 1.0 1480 3253 4734 DOHH2_400M_050219_1,4735 DOHH2_400M_050219_1,4735,STMSTNGIPR True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4736 25.05 521.0 158840.0 25 0 17445.0 + 25359 NATPDSHIM 9 110 493.2237996389327 984.4330463446654 2 493.2234069705009 MULTI CID FTMS 0 0 0 4734 91802.34375 0.4910149204486213 -1 0.0295047760009765 2 Unmodified _NATPDSHIM_ ENSG00000168288|ENST00000303319|MMADHC 26.88365393820708 0.1891292719743517 1 {[QG]|[NA]}T 3 6 36.329 0.0 0.0 3.6904 0.0 0.0 0.0 695.2815320226529 695.2815320226529 21.39050805527644 0.0 0.0 0.0 0 0.5 2.0 0.0 0.5387254899964358 + {[QG]|[NA]}T 3.6904 + + 320 1 2.244 67990.1 1.0 1481 3253 4734 DOHH2_400M_050219_1,4736 DOHH2_400M_050219_1,4736,NATPDSHIM False True NATPDSHIM 25.050257 493.223406970501 897366.5 4734.0 ENSG00000168288|ENST00000303319|MMADHC 3.593310793240865 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4737 25.064 800.0 153400.0 25 0 18251.0 + 43586 YADYSGQQSTY 11 136 641.7645937611208 1281.5146345890414 2 641.7650024294853 MULTI CID FTMS 0 0 0 4734 149533.5625 0.3004385141526641 -2 0.0335464477539062 3 Unmodified _YADYSGQQSTY_ ENSG00000152795|ENST00000295470|HNRNPDL;nc|ENSG00000152795|O14979-2|HNRNPDL 61.60191391372663 0.0626439052904852 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSYGQQ 8 5 51.196 0.0 0.0 3.9949 0.0 0.0 0.0 366.1310035678102 366.1310035678102 20.013091213660825 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 1.079689690656103 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSYGQQ 3.9949 - 3409 1 2.244 92307.3 0.6399999856948853 1482 3253 4734 DOHH2_400M_050219_1,4737 DOHH2_400M_050219_1,4737,YADYSGQQSTY True True YADYSGQQSTY 25.064094 641.765002429485 5971273.5 4734.0 ENSG00000152795|ENST00000295470|HNRNPDL;;nc|ENSG00000152795|O14979-2|HNRNPDL 7.2130537033081055 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4738 25.074 551.0 196630.0 25 0 27160.0 + 8957 FANGRSTGL 9 122 461.74048361754114 921.4664143018824 2 461.7408935427666 MULTI CID FTMS 0 0 0 4734 127212.515625 1.0 0 0.0 4 Unmodified _FANGRSTGL_ ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A 36.12702656103203 0.0967173616627612 1 ENAE 4 8 40.477 0.0 0.0 4.3927 0.0 0.0 460.2711353986344 0.0 460.2711353986344 0.0 22.7131623559534 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.7302046884880937 ENAE 4.3927 - 122 1 2.244 89673.8 1.0 1483 3253 4734 DOHH2_400M_050219_1,4738 DOHH2_400M_050219_1,4738,FANGRSTGL True True FANGRSTGL 25.073759 461.740893542767 799306.875 4734.0 ENSG00000136518|ENST00000429709|ACTL6A;;nc|ENSG00000136518|O96019-2|ACTL6A;;ENSG00000077080|ENST00000160382|ACTL6B 2.7135868867238364 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4740 25.079 27.0 1552900.0 25 0 160140.0 + 35671 SVDPTQTEY 9 71 520.2327213801005 1038.450889827001 2 520.2328369021416 MULTI CID FTMS 0 0 0 4739 1705350.125 0.625562087862607 3 -0.1483211517333984 1 Unmodified _SVDPTQTEY_ ENSG00000009307|ENST00000358528|CSDE1;ENST00000483030.1_1_1:115263111-115268953:-|nuORF;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 17.11289562659939 0.3734572693229295 1 [QT]PTEAT[YE] 9 5 + 27.225 0.0 0.0 2.6217 2.6217 67.864 0.0 0.0 0.0 1.1696288114102629 1.5509894576167795 1.1696288114102629 1.1696288114102629 0 0.0 0.0 1.113982988912431 0.3054621874040891 [QT]PTEAT[YE];[TP]QTEAT[YE];[QT]PTDSV[YE];[TP]QTDSV[YE];[TP][AG]TEAT[YE];[QT]PDTSV[YE];[TP]QDTSV[YE];[QT]PD[VS]T[YE];{[ET]|[MV]}[NP]TW[YE];[QT]PT[Y{M(Oxidation (M))|F}][WP] 2.6217;2.5091;1.8124;1.6998;1.6223;1.6208;1.5082;1.2161;1.1745;1.1204 -;-;-;-;-;-;-;-;-;- 392 1 2.244 37618.0 1.0 1484 3254 4739 DOHH2_400M_050219_1,4740 DOHH2_400M_050219_1,4740,SVDPTQTEY False True SVDPTQTEY 25.078548 520.232836902142 14722220.0 4739.0 nc|ENSG00000009307|O75534-2|CSDE1;;nc|ENSG00000009307|O75534-4|CSDE1;;ENSG00000009307|ENST00000358528|CSDE1;;nc|ENSG00000009307|O75534-3|CSDE1;;ENST00000483030.1_1_1:115263111-115268953:-|nuORF 4.050286372502645 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4741 25.092 800.0 130520.0 25 0 37037.0 -1 0 48 1181.8164283949625 3542.4274557850867 3 1182.151293933392 MULTI CID FTMS 0 0 0 4739 186527.515625 0.4122798801663713 -1 0.0378074645996093 2 1 ME 2 -1 7.9588 0.0 0.0 0.22467 0.0 0.0 2755.146829419656 524.1643160455686 3279.311145465225 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ME 0.22467 - 6 + 1 2.244 90082.5 0.4099999964237213 1485 3254 4739 DOHH2_400M_050219_1,4741 DOHH2_400M_050219_1,4741, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4742 25.094 78.0 942220.0 25 0 90663.0 + 43787 YENEVALRQ 9 90 561.2828428174364 1120.5511327016727 2 561.2831909060478 MULTI CID FTMS 0 0 0 4739 431695.8125 0.4119808057740858 -2 0.0673122406005859 3 Unmodified _YENEVALRQ_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 59.36838082759317 0.0264317782606298 1 YENEVA{I|L}RQ 9 0 + 101.62 0.0 0.0 9.0689 9.0689 93.761 0.0 0.0 0.0 36.47817481888637 9.208187539523747 9.208187539523747 9.208187539523747 0 1.174742501084005 2.0 0.0 1.274227503252014 + + YENEVA{I|L}RQ;YEGGEVA{I|L}RQ 9.0689;8.2472 +;- + 114 + 1 2.244 58542.3 1.0 1486 3254 4739 DOHH2_400M_050219_1,4742 DOHH2_400M_050219_1,4742,YENEVALRQ True True YENEVALRQ 25.094219 561.283190906048 5772769.0 4739.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 6.373008092244466 2.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 4743 25.1 343.0 357350.0 25 0 95912.0 + -1 IPKPREQPL 9 107 359.8060891571907 0 359.8060790896416 PEAK CID FTMS 0 0 0 4739 168481.140625 1.0 0 0.0 4 Carbamidomethyl (C),2 Oxidation (M) _SVC(Carbamidomethyl (C))M(Oxidation (M))M(Oxidation (M))MRM_ ENST00000274787.2_1_5:175816530-175816593:+|nuORF 7.289230182591677 0.5720337190865908 1 GE 2 -1 6.568 0.0 0.0 0.91528 0.0 0.0 301.3683295821564 227.1403292291625 528.5086588113189 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 GE 0.91528 - 20 + 1 2.244 104184.1 1.0 1487 3254 4739 DOHH2_400M_050219_1,4743 DOHH2_400M_050219_1,4743,SVCMMMRM False False IPKPREQPL 25.100421 359.806079089642 874421.3125 4739.0 ENST00000274787.2_1_5:175816530-175816593:+|nuORF 3.042341947555542 3.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 4744 25.109 498.0 199760.0 25 0 14420.0 + 34637 SPNMKHIV 8 134 463.2496065189026 924.4846601046052 2 463.2496215701103 MULTI CID FTMS 0 0 0 4739 114237.203125 1.0 0 0.0 5 Unmodified _SPNMKHIV_ ENSG00000075702|ENST00000401500|WDR62;ENST00000378860.8_1_19:36545867-36564559:+|nuORF;nc|ENSG00000075702|O43379-2|WDR62;nc|ENSG00000075702|O43379-3|WDR62;nc|ENSG00000075702|O43379|WDR62 36.12702656103203 0.299085846329477 1 SPNMKHV{I|L} 8 2 + 41.839 0.0 0.0 4.5257 4.5257 73.456 0.0 0.0 0.0 20.425933421499813 1.3262556527459068 1.3262556527459068 1.3262556527459068 0 1.4249163579994173 1.6989700043360187 0.0 0.0 SPNMKHV{I|L};SPNMKH{I|L}V;SP{[HG]|PP}[C(Carbamidomethyl (C))R]V{I|L};SP{[HG]|PP}[C(Carbamidomethyl (C))R]{I|L}V;SP{[HG]|PP}{[TV]|[{I|L}S]}QS{I|L};SP{[HG]|PP}{[TV]|[{I|L}S]}QTV;SYK[C(Carbamidomethyl (C))R]V{I|L};SYK[C(Carbamidomethyl (C))R]{I|L}V;SYK{[TV]|[{I|L}S]}QS{I|L};SYK{[TV]|[{I|L}S]}QTV 4.5257;4.3822;3.4736;3.3301;3.0099;2.8665;2.7036;2.5602;2.2325;2.0891 -;+;-;-;-;-;-;-;-;- + 360 + 1 2.244 82355.7 1.0 1488 3254 4739 DOHH2_400M_050219_1,4744 DOHH2_400M_050219_1,4744,SPNMKHIV False True SPNMKHIV 25.1092 463.24962157011 588246.0 4739.0 nc|ENSG00000075702|O43379-3|WDR62;;nc|ENSG00000075702|O43379-2|WDR62;;ENSG00000075702|ENST00000401500|WDR62;;nc|ENSG00000075702|O43379|WDR62;;ENST00000378860.8_1_19:36545867-36564559:+|nuORF 5.748175462086995 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4745 25.123 800.0 210720.0 25 0 21398.0 + 36951 TEYPVQRNY 9 138 585.2827610993312 1168.5509692654623 2 585.2823974490166 MULTI CID FTMS 0 0 0 4739 86863.5625 0.3344318097597645 -3 0.0713539123535156 6 Unmodified _TEYPVQRNY_ ENSG00000133030|ENST00000651222|MPRIP;nc|ENSG00000133030|Q6WCQ1-2|MPRIP;nc|ENSG00000133030|Q6WCQ1-3|MPRIP;nc|ENSG00000133030|Q6WCQ1|MPRIP 54.773552608820026 0.0299037012502309 1 {[ET]|[MV]}YPVQ[RN]Y 9 0 + 46.577 0.0 0.0 3.9859 3.9859 73.093 0.0 0.0 0.0 2.4102018050917096 2.4102018050917096 2.4102018050917096 2.4102018050917096 0 1.0 0.0 0.0 0.8494850021680094 + + {[ET]|[MV]}YPVQ[RN]Y;{[DA]|[EG]}[HK]QVPYDP;{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]QVPYDP;{[TV]|[{I|L}S]}[HN]QVPYDP;{[ET]|[MV]}YPVQ{[NV]|[RG]}GY;{[ET]|[MV]}YPV[YR]{[QN]|[E{I|L}]|[KN]};{[QS]|[NT]}[HV]QVPYDP;{[ET]|[MV]}YPV[AG][RN]Y;{[ET]|[MV]}YP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RP]Y;{[DA]|[EG]}[HK][AG]VPYDP 3.9859;3.7796;3.6099;3.4054;3.3961;3.3401;3.2743;3.1979;3.1836;2.9954 +;-;-;-;-;-;-;-;-;- + 377 + 1 2.244 126742.6 0.5099999904632568 1489 3254 4739 DOHH2_400M_050219_1,4745 DOHH2_400M_050219_1,4745,TEYPVQRNY True True TEYPVQRNY 25.123034 585.2842 3487882.5 4739.0 nc|ENSG00000133030|Q6WCQ1-3|MPRIP;;nc|ENSG00000133030|Q6WCQ1|MPRIP;;ENSG00000133030|ENST00000651222|MPRIP;;nc|ENSG00000133030|Q6WCQ1-2|MPRIP 7.836125373840332 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4746 25.129 304.0 329690.0 25 0 33163.0 + 6164 DTAVRHVL 8 127 455.7587930920992 909.5030332509984 2 455.7585021853447 MULTI CID FTMS 0 0 0 4739 145021.953125 0.4696352872634861 -2 0.0673122406005859 7 Unmodified _DTAVRHVL_ ENSG00000149273|ENST00000531188|RPS3;nc|ENSG00000149273|P23396-2|RPS3 71.92227651296345 0.1092646934517833 1 DTAVRHV{I|L} 8 0 + 79.189 0.0 0.0 8.7069 8.7069 90.809 0.0 0.0 0.0 44.05768331247384 13.068660858215082 13.068660858215082 7.231975075880342 0 2.1747425010840047 2.0 0.0 0.0 + + DTAVRHV{I|L};DT{I|L}GRHV{I|L};{[ES]|[DT]|[{I|L}C]}AVRHV{I|L};[TA]DVRHV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[W{I|L}]HV{I|L};[TA]A[W{I|L}]HV{I|L};{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[VG]HV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[HG]|PP}{[QN]|[E{I|L}]|[KN]}V{I|L};[TA]A{[HG]|PP}{[QN]|[E{I|L}]|[KN]}V{I|L};[TA]{[YC]|[HE]}[K{I|L}]V{I|L} 8.7069;7.9117;6.1604;4.4193;3.5344;3.0526;2.8263;1.273;0.79869;0.57426 +;-;+;-;-;-;-;-;-;- + 296 + 1 2.244 82201.5 1.0 1490 3254 4739 DOHH2_400M_050219_1,4746 DOHH2_400M_050219_1,4746,DTAVRHVL True True DTAVRHVL 25.128575 455.758502185345 1555489.625 4739.0 nc|ENSG00000149273|P23396-2|RPS3;;ENSG00000149273|ENST00000531188|RPS3 8.587917804718018 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4747 25.142 800.0 428030.0 25 0 71978.0 11419 GGRAPAGF 8 248 366.6934800960299 731.3724072588598 2 366.6920349001884 MULTI CID FTMS 0 0 0 4739 117902.546875 0.2089980618463135 -4 0.087677001953125 8 Unmodified _GGRAPAGF_ ENST00000555122.1_1_14:105421221-105423995:-|nuORF 2.889219685676258 0.8067950007271085 1 S{I|L}D 3 8 56.894 0.0 0.0 7.7791 0.0 0.0 0.0 413.2029512994751 413.2029512994751 28.038036614035253 0.0 0.0 0.0 0 0.6022338482433752 2.0 0.7059771852360797 0.0 S{I|L}D 7.7791 - 226 + 1 2.244 266603.1 0.959999978542328 1491 3254 4739 DOHH2_400M_050219_1,4747 DOHH2_400M_050219_1,4747,GGRAPAGF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4748 25.146 214.0 311560.0 25 0 63230.0 3416 AYVVNNAD 8 66 433.2056121253109 0 433.2046691775322 PEAK CID FTMS 0 0 0 4739 117150.5703125 1.0 0 0.0 9 Unmodified _AYVVNNAD_ ENSG00000131437|ENST00000403231|KIF3A;nc|ENSG00000131437|Q9Y496|KIF3A 5.230669730166228 0.5807325378471833 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.244 59278.2 1.0 1492 3254 4739 DOHH2_400M_050219_1,4748 DOHH2_400M_050219_1,4748,AYVVNNAD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4749 25.153 258.0 212580.0 25 0 12456.0 + 35500 STMSTNGIPR 10 99 540.2612219530781 1078.507890972956 2 540.7624389529228 MULTI CID FTMS 0 0 0 4739 107433.0078125 0.6058054465561392 13 -0.4715557098388672 10 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 45.739877483867886 0.1051543674217965 1 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 61.433 0.0 0.0 5.6961 5.6961 79.476 0.0 0.0 0.0 7.269987279362624 2.730012720637376 2.730012720637376 2.730012720637376 0 0.8252574989159953 0.0 0.3807196863200844 0.4247425010840047 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}S[RK]EQP;{[MG]|[TS]}{M(Oxidation (M))|F}STRRQP;{[MG]|[TS]}{M(Oxidation (M))|F}RRC(Carbamidomethyl (C))RP;{[MG]|[TS]}{M(Oxidation (M))|F}RRC(Carbamidomethyl (C))PR;[HD][RD]NG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}S[RK]E[AG]P 5.6961;5.443;4.8464;4.5932;3.2372;3.2372;3.1621;2.909;2.5128;2.3834 -;+;-;-;-;-;-;-;-;- + 330 + 1 2.244 48735.4 1.0 1493 3254 4739 DOHH2_400M_050219_1,4749 DOHH2_400M_050219_1,4749,STMSTNGIPR True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4751 25.158 70.0 540290.0 25 0 40950.0 + 25833 NLDKNTVGY 9 68 512.25913764151 1022.50372234982 2 512.2590820193291 MULTI CID FTMS 0 0 0 4750 523842.09375 0.2858809431293807 4 -0.1429710388183593 1 Unmodified _NLDKNTVGY_ ENSG00000007923|ENST00000377577|DNAJC11;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;nc|ENSG00000007923|Q9NVH1-3|DNAJC11 24.99096001346401 0.2132109383330889 1 {[QV]|[N{I|L}]|[RA]|[KV]}D[KS]QVGY 9 2 + 49.287 0.0 0.0 4.8202 4.8202 79.472 0.0 0.0 0.0 15.092503013052934 22.33644810675424 15.092503013052934 5.496812376923046 0 1.742992819099939 1.6989700043360187 0.3494850021680094 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}D[KS]QVGY;{[QV]|[N{I|L}]|[RA]|[KV]}S[SG]VQVGY;{[QV]|[N{I|L}]|[RA]|[KV]}S{[QD]|[EN]|[WG]|[KD]|[RS]}QVGY;{[QV]|[N{I|L}]|[RA]|[KV]}D[KS][AG]VGY;{[QV]|[N{I|L}]|[RA]|[KV]}S[SG]V[AG]VGY;{[QV]|[N{I|L}]|[RA]|[KV]}S{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]VGY;[KA]D[SG]VQVGY;[KA]D{[QD]|[EN]|[WG]|[KD]|[RS]}QVGY;[KA]D[SG]V[AG]VGY;[KA]D{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]VGY 4.8202;4.2827;3.9382;3.9197;3.3864;3.0377;2.7895;2.445;1.8932;1.5445 -;-;-;-;-;-;-;-;-;- 192 1 2.238 35836.0 1.0 1494 3255 4750 DOHH2_400M_050219_1,4751 DOHH2_400M_050219_1,4751,NLDKNTVGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4752 25.16 69.0 706400.0 25 0 78498.0 + 8844 EYVSSQLGRP 10 71 568.2923203557657 1134.5700877783313 2 568.2927123904228 MULTI CID FTMS 0 0 0 4750 828777.75 0.9136771441806606 2 -0.0693798065185546 2 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 17.11289562659939 0.5604042439455784 1 {M(Oxidation (M))|F}STNG{I|L}RP 8 -1 55.003 0.0 0.0 4.8479 0.0 0.0 244.1430870190781 0.0 244.1430870190781 0.0 38.835424479851824 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.3054621874040891 {M(Oxidation (M))|F}STNG{I|L}RP 4.8479 - 238 + 1 2.238 41102.7 1.0 1495 3255 4750 DOHH2_400M_050219_1,4752 DOHH2_400M_050219_1,4752,EYVSSQLGRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4753 25.162 71.0 883630.0 25 0 62524.0 + 35201 SSDNATLTHY 10 103 554.7486362881507 1107.4827196431013 2 554.7488891482353 MULTI CID FTMS 0 0 0 4750 950105.3125 0.466615232132229 -3 0.1462535858154297 3 Unmodified _SSDNATLTHY_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 114.6490535036381 0.0010974644385814 1 {[CA]|SS}DNAT{I|L}THY 10 0 + 91.279 0.0 0.0 8.2421 8.2421 89.771 0.0 0.0 0.0 7.269987279362624 6.581531501239297 6.581531501239297 6.581531501239297 0 1.2302046884880935 0.0 1.5356668758921828 0.8494850021680094 + + {[CA]|SS}DNAT{I|L}THY;{[CA]|SS}DNAT{I|L}{I|L}C(Carbamidomethyl (C))Q;{[CA]|SS}DGGAT{I|L}{I|L}C(Carbamidomethyl (C))Q;{[CA]|SS}DGGAT{I|L}THY;{[CA]|SS}{[WN]|[YH]}T{I|L}THY;{[CA]|SS}{[WN]|[YH]}T{I|L}{I|L}C(Carbamidomethyl (C))Q;{[CA]|SS}DNA[QA][RP]Y;{[CA]|SS}D[HK][Y{M(Oxidation (M))|F}]PQ;[HT]{I|L}TYADN{[CA]|SS};{[CA]|SS}D[HK]WWY 8.2421;7.6478;6.8203;6.6475;5.1202;4.5259;3.495;3.0983;2.7062;2.6383 +;-;-;-;-;-;-;-;-;- + 622 + 1 2.238 51467.9 1.0 1496 3255 4750 DOHH2_400M_050219_1,4753 DOHH2_400M_050219_1,4753,SSDNATLTHY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4754 25.163 82.0 892900.0 25 0 80524.0 + 17977 KRNDYVHAL 9 84 558.3013361563038 1114.5881193794075 2 558.3013183474541 MULTI CID FTMS 0 0 0 4750 541010.75 0.3790999218516105 -3 0.1462535858154297 4 Unmodified _KRNDYVHAL_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 15.248480904072842 0.4239247793462406 1 YVHA{I|L} 5 4 47.396 0.0 0.0 4.2523 0.0 0.0 513.2657337873062 0.0 513.2657337873062 0.0 36.42642683904553 0.0 0.0 0 1.0941876774005248 0.0 0.0 0.0 + YVHA{I|L} 4.2523 + + 130 1 2.238 62232.8 1.0 1497 3255 4750 DOHH2_400M_050219_1,4754 DOHH2_400M_050219_1,4754,KRNDYVHAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4755 25.167 175.0 387020.0 25 0 66614.0 + 35314 SSSPTHSLY 9 94 489.7297546788921 977.444956424584 2 489.7299682497978 MULTI CID FTMS 0 0 0 4750 283885.6875 0.4362508084550714 -3 0.1462535858154297 5 Unmodified _SSSPTHSLY_ chr5:169840852-169934652|48|17.27|0.78|4.47|+|ENST00000519628|DOCK2,DOCK2;ENSG00000134516|ENST00000520908|DOCK2 36.04419817259434 0.0971720506436186 1 YS[TP]RY 6 5 20.353 0.0 0.0 2.0822 0.0 0.0 192.0728345075418 0.0 192.0728345075418 0.0 3.362949535509099 0.0 0.0 0 0.0 0.0 0.75 0.2887254899964357 YS[TP]RY 2.0822 - 242 + 1 2.238 57495.9 1.0 1498 3255 4750 DOHH2_400M_050219_1,4755 DOHH2_400M_050219_1,4755,SSSPTHSLY True True SSSPTHSLY 25.166823 489.729968249798 3352685.5 4750.0 chr5:169840852-169934652|48|17.27|0.78|4.47|+|ENST00000519628|DOCK2,DOCK2;;ENSG00000134516|ENST00000520908|DOCK2 4.504905064900716 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4756 25.175 486.0 271900.0 25 0 30644.0 + 7277 EETQIGGERY 10 143 591.2750985064141 1180.535644079628 2 591.2756225466728 MULTI CID FTMS 0 0 0 4750 210266.03125 1.0 0 0.0 6 Unmodified _EETQIGGERY_ ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 74.19965305603844 0.0188013450058842 1 EETQ{I|L}G{[DA]|[EG]}RY 10 0 + 70.227 0.0 0.0 5.9487 5.9487 81.403 0.0 0.0 0.0 42.321844178516486 2.1180336453421944 2.1180336453421944 3.214562785677657 0 0.9247425010840048 1.6989700043360187 0.7302046884880937 0.7302046884880937 + + EETQ{I|L}G{[DA]|[EG]}RY;EE[HK]G{I|L}QTCH;EET[AG]{I|L}G{[DA]|[EG]}RY;EETQ{I|L}Y[HV]Y;EETQ{I|L}G{[TV]|[{I|L}S]}G[{M(Oxidation (M))|F}T];EETQ{I|L}Y[YV]H;EE[HK]G{I|L}[AG]TCH;EETQC[RP]RY;EETQ{I|L}[WK][{M(Oxidation (M))|F}T];EETQ{I|L}G[RH]DP 5.9487;5.6764;5.1724;5.0956;5.0493;4.9464;4.9001;4.8817;4.8271;4.7705 +;-;-;-;-;-;-;-;-;- + 686 + 1 2.238 101785.9 1.0 1499 3255 4750 DOHH2_400M_050219_1,4756 DOHH2_400M_050219_1,4756,EETQIGGERY True True EETQIGGERY 25.175421 591.275622546673 1168972.625 4750.0 nc|ENSG00000135624|Q99832-2|CCT7;;nc|ENSG00000135624|Q99832-4|CCT7;;ENSG00000135624|ENST00000258091|CCT7;;nc|ENSG00000135624|Q99832-3|CCT7 5.601058006286621 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4757 25.179 209.0 224640.0 25 0 15569.0 -1 STMSTNGIPR 10 87 540.2612219530781 1078.507890972956 2 540.2609741091728 MULTI CID FTMS 0 0 0 4750 209666.59375 0.5710109757380393 14 -0.4535179138183594 7 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 33.4449034751529 0.2267874087365337 1 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 10 -1 + 53.945 0.0 0.0 5.0018 5.0018 78.389 0.0 0.0 0.0 7.269987279362624 3.590219426416681 3.590219426416681 3.590219426416681 0 0.9247425010840048 0.0 0.4247425010840047 0.3494850021680094 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}RRC(Carbamidomethyl (C))RP;{[MG]|[TS]}{M(Oxidation (M))|F}RRC(Carbamidomethyl (C))PR;{[MG]|[TS]}{M(Oxidation (M))|F}RR[CG]RP;[HD]S[PS]N{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}RR[CG]PR;[HD]T{[{M(Oxidation (M))|F}H]|[RQ]}{[VA]|[{I|L}G]}RP 5.0018;4.6689;4.1521;3.8192;2.9593;2.6264;2.1005;1.8487;1.7676;1.6854 -;+;-;-;-;-;-;-;-;- + 211 + 1 2.238 42382.4 1.0 1500 3255 4750 DOHH2_400M_050219_1,4757 DOHH2_400M_050219_1,4757,STMSTNGIPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4758 25.193 800.0 145300.0 25 0 23250.0 -1 0 66 1123.367638108682 2244.7207232841643 2 1123.867968738079 MULTI CID FTMS 0 0 0 4750 175761.953125 0.666219608906883 -4 0.1502952575683593 8 1 Q 1 -1 4.6041 0.0 0.0 0.20511 0.0 0.0 1122.161385299825 991.4802340143186 2113.641619314144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.20511 - 26 + 1 2.238 88312.8 0.5699999928474426 1501 3255 4750 DOHH2_400M_050219_1,4758 DOHH2_400M_050219_1,4758, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4759 25.201 446.0 272820.0 25 0 33972.0 + 23374 LTDPDGALAK 10 119 500.7692115787347 999.5238702242694 2 500.7687255740166 MULTI CID FTMS 0 0 0 4750 105665.8125 0.2082489547692301 -4 0.1502952575683593 9 Unmodified _LTDPDGALAK_ ENSG00000175203|ENST00000548249|DCTN2;ENST00000551872.1_1_12:57927977-57928175:-|nuORF;ENST00000552390.5_1_12:57926966-57928919:-|nuORF;nc|ENSG00000175203|Q13561-2|DCTN2;nc|ENSG00000175203|Q13561-3|DCTN2 49.52724829834842 0.0829255630816734 1 {I|L}TDPDQ{I|L}AK 9 2 + 78.219 0.0 0.0 7.8257 7.8257 86.155 0.0 0.0 0.0 53.649998781293874 11.716430671353976 11.716430671353976 3.4678748622465605 0 0.7742275032520141 2.0 0.0 0.2887254899964357 {I|L}TDPDQ{I|L}AK;{I|L}TDPDGA{I|L}AK;{I|L}TDPDQAK{I|L};{I|L}TDPDGAAK{I|L};{I|L}TDPVV[DN]K;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}VVPD[VP];[EP]{[TV]|[{I|L}S]}DQ{I|L}AK;[EP]{[TV]|[{I|L}S]}DGA{I|L}AK;[EP]{[TV]|[{I|L}S]}DQAK{I|L};[EP]WWA{I|L}AK 7.8257;7.4787;6.4861;6.1391;5.312;2.567;1.4232;1.0763;0.08364;0.075786 -;+;-;-;-;-;-;-;-;- + 508 + 1 2.238 96692.8 1.0 1502 3255 4750 DOHH2_400M_050219_1,4759 DOHH2_400M_050219_1,4759,LTDPDGALAK True True LTDPDGALAK 25.201206 500.768725574017 2665582.75 4750.0 nc|ENSG00000175203|Q13561-3|DCTN2;;ENST00000551872.1_1_12:57927977-57928175:-|nuORF;;ENSG00000175203|ENST00000548249|DCTN2;;ENST00000552390.5_1_12:57926966-57928919:-|nuORF;;nc|ENSG00000175203|Q13561-2|DCTN2 8.204650243123373 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4760 25.207 318.0 243180.0 25 0 11348.0 + 29221 QGLTKHMTV 9 121 507.7740594770721 1013.5335660209442 2 507.7736999392509 MULTI CID FTMS 0 0 0 4750 85192.140625 0.4747892540807054 -2 0.1167488098144531 10 Unmodified _QGLTKHMTV_ ENSG00000134057|ENST00000256442|CCNB1 22.736283301280096 0.2418982879461534 1 YS[YR]KY 6 8 18.097 0.0 0.0 1.7855 0.0 0.0 135.0955325285235 0.0 135.0955325285235 0.0 6.61329881269581 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.4247425010840047 YS[YR]KY 1.7855 - 352 + 1 2.238 63292.6 1.0 1503 3255 4750 DOHH2_400M_050219_1,4760 DOHH2_400M_050219_1,4760,QGLTKHMTV False True QGLTKHMTV 25.206983 507.773699939251 1302928.75 4750.0 ENSG00000134057|ENST00000256442|CCNB1 5.7681582768758135 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4761 25.208 25.0 5548600.0 25 0 654900.0 + 17978 KRNDYVHAL 9 130 372.5367096444811 1114.5882995336433 3 372.8704711794853 MULTI CID FTMS 0 0 0 4750 1338846.0 0.3924271317634051 -3 0.1462535858154297 11 Unmodified _KRNDYVHAL_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 81.89019881105858 0.0170587746866453 1 {I|L}[EP]VYKH{[ET]|[MV]} 9 7 + 53.385 0.0 0.0 4.7897 4.7897 77.137 0.0 0.0 0.0 25.4178851384269 2.534897615156865 2.534897615156865 3.1904540179277774 0 1.3754223615525998 0.0 0.0 2.0 {I|L}[EP]VYKH{[ET]|[MV]};K{M(Oxidation (M))|F}[HT]YVHA{I|L};K[NP]VYKH{[ET]|[MV]};K{M(Oxidation (M))|F}[HT]YV{I|L}[HA];KVEVYP[HM]{I|L};{[ET]|[MV]}[KP]Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A{I|L};KVEVY[RN][HA];{I|L}[EP]K[YV]H{[ET]|[MV]};K[NP]K[YV]H{[ET]|[MV]};K[NP][RP]HH{[ET]|[MV]} 4.7897;4.5034;4.2724;2.5826;2.3923;2.1676;1.8062;1.8022;1.2849;0.95474 -;-;-;-;-;-;-;-;-;- 723 + 1 2.238 111630.8 1.0 1504 3255 4750 DOHH2_400M_050219_1,4761 DOHH2_400M_050219_1,4761,KRNDYVHAL True True KRNDYVHAL 25.208162 372.870471179485 60896301.5 4750.0 ENSG00000126457|ENST00000454376|PRMT1;;nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;;nc|ENSG00000126457|Q99873-5|PRMT1 8.491790612538656 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4763 25.213 34.0 1162300.0 25 0 146880.0 + 38477 TSDNGKDGLAY 11 78 570.7617988788351 1139.50904482447 2 570.7619506716728 MULTI CID FTMS 0 0 0 4762 1776729.125 0.6551666075900473 3 -0.0875358581542968 1 Unmodified _TSDNGKDGLAY_ ENSG00000105325|ENST00000441788|FZR1;nc|ENSG00000105325|Q9UM11-3|FZR1;nc|ENSG00000105325|Q9UM11|FZR1 37.07464296494664 0.257459615863268 1 {[MG]|[TS]}PAKG[MN]TAY 11 7 + 39.536 0.0 0.0 3.4695 3.4695 76.124 0.0 0.0 0.0 6.281163392168686 22.10049150278205 6.281163392168686 6.575773191777941 0 1.3935078169319297 0.0 0.1923877696554315 0.4247425010840047 {[MG]|[TS]}PAKG[MN]TAY;{[MG]|[TS]}PAKG[WC(Carbamidomethyl (C))]AY;{[MG]|[TS]}P[KQ][MN]TAY;{[MG]|[TS]}P[W{I|L}]{[DS]|[MA]|[CV]|TT}TAY;{[MG]|[TS]}P[KQ][WC(Carbamidomethyl (C))]AY;AA[DV]KG[WC(Carbamidomethyl (C))]AY 3.4695;2.8925;2.0395;1.6667;1.4662;0.74897 -;-;-;-;-;- 114 1 2.238 35693.7 1.0 1505 3256 4762 DOHH2_400M_050219_1,4763 DOHH2_400M_050219_1,4763,TSDNGKDGLAY False True TSDNGKDGLAY 25.212927 570.761950671673 34743568.0 4762.0 nc|ENSG00000105325|Q9UM11|FZR1;;ENSG00000105325|ENST00000441788|FZR1;;nc|ENSG00000105325|Q9UM11-3|FZR1 7.608558177947998 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4764 25.222 528.0 183240.0 25 0 10325.0 + 10647 FVQLCPYKGQG 11 113 620.3130774713335 1238.6116020094669 2 620.3135253787041 MULTI CID FTMS 0 0 0 4762 160647.0 0.2815956023638959 36 -1.427316665649414 2 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 1 {[HG]|PP}MAPPPPPPQN 12 -1 {[HG]|PP}MA + + 74.036 13.188 3.3287 5.9774 5.9774 60.233 0.0 0.0 0.0 0.0 60.6715102335306 0.0 0.0 0 2.7302046884880937 0.0 0.0 1.569095041121134 {[HG]|PP}MAPPPPPPQN 5.9774 - 2363 + 1 2.238 75817.7 1.0 1506 3256 4762 DOHH2_400M_050219_1,4764 DOHH2_400M_050219_1,4764,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4766 25.227 8.8 7992700.0 25 0 764850.0 + 17979 KRNDYVHAL 9 87 372.5367096444811 1114.5882995336433 3 372.5364868044853 MULTI CID FTMS 0 0 0 4765 5163592.5 0.9101501293373578 -1 0.0139446258544921 1 Unmodified _KRNDYVHAL_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 36.12702656103203 0.0967173616627612 1 KVEVYP[HM]{I|L} 9 5 + 31.317 0.0 0.0 2.8098 2.8098 79.575 0.0 0.0 0.0 7.530895343140887 4.471172114978653 4.471172114978653 11.489089493642936 0 0.2655369766872111 0.0 0.0 0.0 KVEVYP[HM]{I|L};{[ET]|[MV]}[KP]Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A{I|L};[HV]YPYV[PG]A{I|L};KVEVY[RN][HA];[{M(Oxidation (M))|F}T][HK][YV]HA{I|L};[HV]Y[{M(Oxidation (M))|F}T]KHA{I|L};[HV]YPY[RP]A{I|L} 2.8098;1.779;1.7328;1.6867;1.5432;1.5306;1.4883 -;-;-;-;-;-;- 108 + 1 2.238 63267.5 1.0 1507 3257 4765 DOHH2_400M_050219_1,4766 DOHH2_400M_050219_1,4766,KRNDYVHAL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4767 25.23 147.0 596830.0 25 0 43711.0 + 19367 LEQRELKRL 9 115 395.5753109719443 1183.704103516033 3 395.5747863650322 MULTI CID FTMS 0 0 0 4765 387305.5 0.31579064307185 -4 0.1861286163330078 2 Unmodified _LEQRELKRL_ REV__ENSG00000159450|ENST00000614923|TCHH 24.020572477871973 0.2255576514309169 1 {I|L}E 2 -1 34.961 0.0 0.0 2.9535 0.0 0.0 0.0 938.557607164298 938.557607164298 14.47621246364342 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.5 0.0 {I|L}E 2.9535 + + 58 + 1 2.238 73023.1 1.0 1508 3257 4765 DOHH2_400M_050219_1,4767 DOHH2_400M_050219_1,4767,LEQRELKRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4768 25.235 269.0 377110.0 25 0 67469.0 6209 DTKKTKLE 8 104 481.7803827170905 961.5462125009808 2 481.7801086306572 MULTI CID FTMS 0 0 0 4765 144811.671875 0.2824218513120288 -4 0.1861286163330078 3 Unmodified _DTKKTKLE_ ENSG00000075292|ENST00000264447|ZNF638;nc|ENSG00000075292|Q14966-3|ZNF638;nc|ENSG00000075292|Q14966-5|ZNF638 11.640296217721598 0.738950129755968 1 D{M(Oxidation (M))|F} 2 7 20.969 0.0 0.0 2.1808 0.0 0.0 0.0 696.4282809890188 696.4282809890188 5.484550065040281 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{M(Oxidation (M))|F} 2.1808 - 70 + 1 2.238 79993.0 1.0 1509 3257 4765 DOHH2_400M_050219_1,4768 DOHH2_400M_050219_1,4768,DTKKTKLE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4769 25.242 411.0 206110.0 25 0 11235.0 -1 VDTPIMTK 8 126 460.7415121188164 919.4684713044328 2 460.7410766482353 MULTI CID FTMS 0 0 0 4765 107959.0 0.5000569942760377 -7 0.2359981536865234 4 Oxidation (M) _VDTPIM(Oxidation (M))TK_ ENSG00000143971|ENST00000272342|ETAA1 24.020572477871973 0.5389365498350341 1 [TA]P 3 -1 22.958 0.0 0.0 2.4968 0.0 0.0 0.0 647.3082289550765 647.3082289550765 1.2760763172896006 0.0 0.0 0.0 0 0.0 2.0 0.25 0.0 [TA]P 2.4968 - 146 1 2.238 66781.7 1.0 1510 3257 4765 DOHH2_400M_050219_1,4769 DOHH2_400M_050219_1,4769,VDTPIMTK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4770 25.256 800.0 122300.0 25 0 9351.6 -1 LMFSRDFLSGQ 11 128 658.8203833402147 1315.6262137472293 2 658.8203613162041 MULTI CID FTMS 0 0 0 4765 103105.4296875 0.5407371154147934 -2 0.0693798065185546 5 Oxidation (M) _LM(Oxidation (M))FSRDFLSGQ_ nc|ENSG00000160216|Q9NRZ7-3|AGPAT3 36.506200033944 0.2662161991516171 1 {[SA]|[TG]}GPS[WK]PSQSAN 13 -1 + 94.34 0.0 0.0 7.1708 7.1708 86.823 0.0 0.0 0.0 5.290964650598752 9.072459467631006 5.290964650598752 5.290964650598752 0 1.5 0.7958800173440752 2.309894379144197 0.6549471895720984 {[SA]|[TG]}GPS[WK]PSQSAN;[PS]QS[WK]PSQSAN;{[QS]|[NT]}PS[WK]PSQSAN;{[SA]|[TG]}GPS[WK]PS[AG]SAN;{[SA]|[TG]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[RV]PSQSAN;{[DA]|[EG]}{[NV]|[RG]}[WK]PSQSAN;{[SA]|[TG]}{[WN]|[YH]}[RV]PSQSAN;[PS][AG]S[WK]PSQSAN;[PS]QS[WK]PS[AG]SAN;{[QS]|[NT]}PS[WK]PS[AG]SAN 7.1708;6.7686;6.7033;6.4812;6.3714;6.3445;6.1157;6.0771;6.0771;6.0118 -;-;-;-;-;-;-;-;-;- 2779 1 2.238 76518.9 0.550000011920929 1511 3257 4765 DOHH2_400M_050219_1,4770 DOHH2_400M_050219_1,4770,LMFSRDFLSGQ False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4772 25.269 605.0 342260.0 25 0 87044.0 + + 19198 DLKAASKL 8 135 423.1626485239042 0 423.1626159548759 PEAK CID FTMS 0 0 0 4771 168383.109375 0.536703502329687 -2 0.047637939453125 1 Unmodified _LEGCSSCF_ ENSG00000102580|ENST00000602402|DNAJC3 5.760428011301431 0.5786759180849727 1 {I|L}K 2 -1 15.217 0.0 0.0 1.8022 0.0 0.0 114.83509660002753 485.2731994267716 600.1082960267992 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}K 1.8022 - 89 + 1 2.238 167401.5 1.0 1512 3258 4771 DOHH2_400M_050219_1,4772 DOHH2_400M_050219_1,4772,LEGCSSCF False False DLKAASKL 25.268881 423.162615954876 663523.5 4771.0 ENSG00000102580|ENST00000602402|DNAJC3 3.643232186635336 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4773 25.273 188.0 390110.0 25 0 32230.0 + 8167 EPQAKNISV 9 103 493.26942203458 984.52429113596 2 493.2689391970634 MULTI CID FTMS 0 0 0 4771 351235.46875 0.2432154367693768 -3 0.1030731201171875 2 Unmodified _EPQAKNISV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF 14.838274106304384 0.4350285940865338 1 {I|L}NKAG{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 7 7 34.658 0.0 0.0 3.5203 0.0 0.0 222.1229794318781 0.0 222.1229794318781 0.0 13.644710235987318 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.7302046884880937 {I|L}NKAG{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 3.5203 - 370 + 1 2.238 59454.8 1.0 1513 3258 4771 DOHH2_400M_050219_1,4773 DOHH2_400M_050219_1,4773,EPQAKNISV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4774 25.275 145.0 659330.0 25 0 40006.0 + 37222 TIKKRFKVL 9 113 378.2571278236906 1131.749554071272 3 378.2566711306572 MULTI CID FTMS 0 0 0 4771 199695.375 0.3113165080297979 -4 0.1820144653320312 3 Unmodified _TIKKRFKVL_ ENSG00000182117|ENST00000328848|NOP10;ENST00000557912.1_1_15:34634171-34635317:-|nuORF 45.69961567697781 0.0497987121815769 1 {I|L}TK 3 7 49.609 0.0 0.0 4.3834 0.0 0.0 0.0 786.4992612025424 786.4992612025424 35.00508444608478 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.4247425010840047 {I|L}TK 4.3834 - 94 + 1 2.238 83605.5 1.0 1514 3258 4771 DOHH2_400M_050219_1,4774 DOHH2_400M_050219_1,4774,TIKKRFKVL True True TIKKRFKVL 25.275395 378.256671130657 4027545.75 4771.0 ENSG00000182117|ENST00000328848|NOP10;;ENST00000557912.1_1_15:34634171-34635317:-|nuORF 2.91438357035319 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4775 25.284 457.0 474770.0 25 0 76273.0 + -1 SELWCGCQSG 10 175 592.2285818085917 1182.4426106839833 2 592.2282592654228 MULTI CID FTMS 0 0 0 4771 190512.09375 0.8265120254543037 -2 0.047637939453125 4 2 Carbamidomethyl (C) _SELWC(Carbamidomethyl (C))GC(Carbamidomethyl (C))QSG_ REV__ENST00000592777.1_1_18:44027519-44030266:+|nuORF 22.736283301280096 0.4578556481593033 1 {[ES]|[DT]|[{I|L}C]}{I|L}S[C(Carbamidomethyl (C))C]NHS{M(Oxidation (M))|F} 10 -1 + 41.105 0.0 0.0 3.4762 3.4762 77.64 0.0 0.0 0.0 30.30763679850292 6.794492995028726 6.794492995028726 8.563496831584239 0 0.75 0.0 0.9476212463643424 0.7742275032520141 {[ES]|[DT]|[{I|L}C]}{I|L}S[C(Carbamidomethyl (C))C]NHS{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}S[C(Carbamidomethyl (C))C]NHAY;{[ES]|[DT]|[{I|L}C]}[MT]CQNHS{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}S[C(Carbamidomethyl (C))C]GGHS{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}[MT]CQGGHS{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}[MT]C[AG]NHS{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}[MT]CQNHAY;{[ES]|[DT]|[{I|L}C]}{I|L}S[C(Carbamidomethyl (C))C]GGHAY;{[ES]|[DT]|[{I|L}C]}[MT]CQSSV[DP];{[ES]|[DT]|[{I|L}C]}{I|L}S[C(Carbamidomethyl (C))C]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[DP] 3.4762;2.752;2.5803;2.0464;1.8052;1.8052;1.6119;1.3222;1.1455;1.0215 -;-;-;-;-;-;-;-;-;- 897 + 1 2.238 162318.2 1.0 1515 3258 4771 DOHH2_400M_050219_1,4775 DOHH2_400M_050219_1,4775,SELWCGCQSG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4776 25.288 238.0 302580.0 25 0 28359.0 + 23381 LTDPEAAKY 9 112 504.256404827722 1006.498256722244 2 504.2570983767509 MULTI CID FTMS 0 0 0 4771 151322.046875 0.3452275199555581 -4 0.1820144653320312 5 Unmodified _LTDPEAAKY_ ENSG00000177628|ENST00000368373|GBA1;ENST00000459805.5_1_1:155184905-155186549:-|nuORF;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;nc|ENSG00000177628|P04062-2|GBA1;nc|ENSG00000177628|P04062-3|GBA1;nc|ENSG00000177628|P04062-4|GBA1;nc|ENSG00000177628|P04062-5|GBA1 45.69961567697781 0.0497987121815769 1 {I|L}TD[EP]AAKY 9 0 + 53.967 0.0 0.0 5.3619 5.3619 89.59 0.0 0.0 0.0 37.741658314340526 0.6348625752110593 0.6348625752110593 24.16370119980661 0 0.7134679910804405 2.0 0.0 0.0 + + {I|L}TD[EP]AAKY;{I|L}T[RN]QQT{M(Oxidation (M))|F};[VP][PS]A[EP]D[VP];[EP][KP][EP]D[VP] 5.3619;2.9611;1.2406;0.20841 +;-;-;- + 161 + 1 2.238 57663.0 1.0 1516 3258 4771 DOHH2_400M_050219_1,4776 DOHH2_400M_050219_1,4776,LTDPEAAKY True True LTDPEAAKY 25.287974 504.257098376751 2856690.0 4771.0 ENST00000459805.5_1_1:155184905-155186549:-|nuORF;;nc|ENSG00000177628|P04062-4|GBA1;;nc|ENSG00000177628|P04062-5|GBA1;;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;;ENSG00000177628|ENST00000368373|GBA1;;nc|ENSG00000177628|P04062-3|GBA1;;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;;nc|ENSG00000177628|P04062-2|GBA1 7.391775608062744 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4777 25.296 444.0 288860.0 25 0 25248.0 22578 LPWVYFVSL 9 141 375.2101767995552 1122.6087009988655 3 375.2101623415947 MULTI CID FTMS 0 0 0 4771 116735.0 0.7562637148616614 -1 0.0336933135986328 6 Unmodified _LPWVYFVSL_ ENSG00000102001|ENST00000323022|CACNA1F;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000102001|O60840-4|CACNA1F;nc|ENSG00000102001|O60840-5|CACNA1F;nc|ENSG00000102001|O60840-6|CACNA1F;nc|ENSG00000102001|O60840-7|CACNA1F;nc|ENSG00000102001|O60840|CACNA1F;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000157388|Q01668-3|CACNA1D;nc|ENSG00000157388|Q01668-4|CACNA1D 17.11289562659939 0.3734572693229295 1 {I|L}N 2 8 20.431 0.0 0.0 1.82 0.0 0.0 0.0 892.4601876673182 892.4601876673182 1.0509933043215298 0.0 0.0 0.0 0 0.1050541008457974 0.0 0.0 0.3807196863200844 {I|L}N 1.82 - 34 + 1 2.238 103167.2 1.0 1517 3258 4771 DOHH2_400M_050219_1,4777 DOHH2_400M_050219_1,4777,LPWVYFVSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4779 25.3 31.0 1832500.0 25 0 327350.0 + 45295 YSEGYPGQRY 10 64 610.2722736758006 1218.5299944184012 2 610.2724487185478 MULTI CID FTMS 0 0 0 4778 1766597.75 0.6334540618375085 2 -0.071451187133789 1 Unmodified _YSEGYPGQRY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 70.33199760932243 0.018925923965799 1 YSEGYY 6 4 83.448 0.0 0.0 6.8483 0.0 0.0 0.0 453.2218111627563 453.2218111627563 71.7659970366416 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.8494850021680094 0.0 YSEGYY 6.8483 - 148 + 1 2.238 46316.4 1.0 1518 3259 4778 DOHH2_400M_050219_1,4779 DOHH2_400M_050219_1,4779,YSEGYPGQRY True True YSEGYPGQRY 25.300462 610.272448718548 30684428.0 4778.0 nc|ENSG00000176974|P34896-2|SHMT1;;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;;ENSG00000176974|ENST00000316694|SHMT1;;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;;nc|ENSG00000176974|P34896-3|SHMT1 10.812104225158691 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4780 25.31 522.0 193860.0 25 0 8289.2 -1 RPCPWNYGQF 10 124 662.7996366284567 1323.584720323713 2 662.8021118044853 MULTI CID FTMS 0 0 0 4778 164785.078125 0.6542248756747274 -2 0.0735912322998046 2 Carbamidomethyl (C) _RPC(Carbamidomethyl (C))PWNYGQF_ ENSG00000104055|ENST00000220420|TGM5;nc|ENSG00000104055|O43548-2|TGM5 25.399314129420983 0.3980215340001851 1 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F} 13 -1 + 125.49 0.0 0.0 9.4813 9.4813 92.584 0.0 0.0 0.0 10.0 16.642078980768062 10.0 9.07245946763102 0 0.9269359821608808 1.3979400086720375 0.3494850021680094 2.254432191740108 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QNA{M(Oxidation (M))|F};[AG]NA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};[AG]GQ{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};[AG]GGA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG][AG]NA{M(Oxidation (M))|F} 9.4813;8.7958;8.7958;8.7958;8.7258;8.6918;8.4381;8.4138;8.1414;8.1121 -;-;-;-;-;-;-;-;-;- 4146 1 2.238 78967.5 1.0 1519 3259 4778 DOHH2_400M_050219_1,4780 DOHH2_400M_050219_1,4780,RPCPWNYGQF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4781 25.315 309.0 315730.0 25 0 35800.0 + 596 AEIVEGENHTY 11 101 631.2884051830819 1260.5622574329636 2 631.2873412966728 MULTI CID FTMS 0 0 0 4778 227605.5 0.1108115447162585 -6 0.2597198486328125 3 Unmodified _AEIVEGENHTY_ ENSG00000196924|ENST00000369850|FLNA;ENST00000474358.5_1_X:153580213-153581146:-|nuORF;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;nc|ENSG00000196924|P21333-2|FLNA 63.22749603027936 0.0560465731344335 1 {[CP]|[EA]}{I|L}VEWN[HT]Y 10 2 + 71.33 0.0 0.0 5.6586 5.6586 85.661 0.0 0.0 0.0 31.174479307639388 8.300446322458754 8.300446322458754 9.164539485499247 0 1.424742501084005 0.0 2.385151878060192 0.0 {[CP]|[EA]}{I|L}VEWN[HT]Y;{[CP]|[EA]}{I|L}VEWGG[HT]Y;{[CP]|[EA]}{I|L}VE{[DA]|[EG]}N[HT]Y;{[CP]|[EA]}{I|L}V{M(Oxidation (M))|F}YE{NN|[MP]|[D{I|L}]|[EV]}Y;{[CP]|[EA]}{I|L}V{M(Oxidation (M))|F}WDD{I|L}[PG];{[CP]|[EA]}{I|L}VE{[CT]|[{M(Oxidation (M))|F}G]}DD{I|L}[PG];{[CP]|[EA]}{I|L}VE[Y{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]}Y;{[CP]|[EA]}{I|L}V{M(Oxidation (M))|F}GEDD{I|L}[PG];[HN]TGEYEV{I|L}{[CP]|[EA]};[HN]TGEEYV{I|L}{[CP]|[EA]} 5.6586;4.9316;4.9316;4.7843;3.7815;3.6331;3.6268;3.5896;3.2624;3.2526 -;-;+;-;-;-;-;-;-;- + 1861 + 1 2.238 82946.3 1.0 1520 3259 4778 DOHH2_400M_050219_1,4781 DOHH2_400M_050219_1,4781,AEIVEGENHTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4782 25.326 601.0 160700.0 25 0 10344.0 -1 SGDYECHVY 9 143 565.2173853708929 1128.4202178085857 2 565.2181884646416 MULTI CID FTMS 0 0 0 4778 137437.546875 0.7843028734846602 -1 0.0398979187011718 4 Carbamidomethyl (C) _SGDYEC(Carbamidomethyl (C))HVY_ ENSG00000105711|ENST00000262631|SCN1B;nc|ENSG00000105711|Q07699-2|SCN1B 23.1484247019978 0.2366544122328345 1 {[CT]|[{M(Oxidation (M))|F}G]}N{I|L}TTCDSGD 11 -1 + 53.478 0.0 0.0 4.7392 4.7392 82.091 0.0 0.0 0.0 0.4082676507147553 19.11989100995724 0.4082676507147553 9.128498242810998 0 0.7429928190999391 0.0 1.2059771852360797 0.0 {[CT]|[{M(Oxidation (M))|F}G]}N{I|L}TTCDSGD;{[CT]|[{M(Oxidation (M))|F}G]}GG{I|L}TTCDSGD;[SG]V[R{M(Oxidation (M))|F}]SCDSGD;[WM][KT]SCDSGD;{[QD]|[EN]|[WG]|[KD]|[RS]}[R{M(Oxidation (M))|F}]SCDSGD;{[CT]|[{M(Oxidation (M))|F}G]}{[TV]|[{I|L}S]}QTCDSGD;{[CT]|[{M(Oxidation (M))|F}G]}[WR]SCDSGD;[TA]A[R{M(Oxidation (M))|F}]SCDSGD 4.7392;3.9302;3.6657;2.6028;2.18;2.1699;2.0505;1.4411 -;-;-;-;-;-;-;- 453 1 2.238 75546.2 1.0 1521 3259 4778 DOHH2_400M_050219_1,4782 DOHH2_400M_050219_1,4782,SGDYECHVY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4784 25.343 800.0 134060.0 25 0 13374.0 + 43587 YADYSGQQSTY 11 129 641.7645937611208 1281.5146345890414 2 641.7643920779228 MULTI CID FTMS 0 0 0 4783 157571.578125 0.3165882629497671 5 -0.158538818359375 1 Unmodified _YADYSGQQSTY_ ENSG00000152795|ENST00000295470|HNRNPDL;nc|ENSG00000152795|O14979-2|HNRNPDL 36.506200033944 0.2662161991516171 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSNAYQ 8 7 31.317 0.0 0.0 2.4438 0.0 0.0 0.0 366.13375014984143 366.13375014984143 5.566431890060109 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSNAYQ 2.4438 - 1942 1 2.238 80024.4 0.8500000238418579 1522 3260 4783 DOHH2_400M_050219_1,4784 DOHH2_400M_050219_1,4784,YADYSGQQSTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4785 25.357 800.0 443490.0 25 0 99448.0 + 7938 ELRRKIQEL 9 169 592.8589975434489 1183.7034421536978 2 592.8587524294853 MULTI CID FTMS 0 0 0 4783 247517.5625 0.885272172817903 -1 0.0299949645996093 2 Unmodified _ELRRKIQEL_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1;UHRF1-KDM4B|1|fusion;UHRF1-KDM4B|2|fusion 57.24910588100465 0.0276051374632116 1 {I|L}ER 3 7 41.158 0.0 0.0 3.4771 0.0 0.0 0.0 782.4522799127561 782.4522799127561 24.44291334350498 0.0 0.0 0.0 0 0.2614393726401688 1.154901959985743 0.3807196863200844 0.0 {I|L}ER 3.4771 - 118 + 1 2.238 263257.6 0.8700000047683716 1523 3260 4783 DOHH2_400M_050219_1,4785 DOHH2_400M_050219_1,4785,ELRRKIQEL True True ELRRKIQEL 25.356726 592.858752429485 1504252.25 4783.0 chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;;UHRF1-KDM4B|2|fusion;;UHRF1-KDM4B|1|fusion;;nc|ENSG00000276043|Q96T88-2|UHRF1;;ENSG00000276043|ENST00000650932|UHRF1 3.8970351219177246 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4786 25.367 602.0 234680.0 25 0 54520.0 + + 14187 VENPEHNDF 9 128 550.8131991569643 1099.6118453807285 2 550.8133422732353 MULTI CID FTMS 0 0 0 4783 144920.1875 0.9350336122034244 -2 0.0698928833007812 3 Unmodified _IDHKHPLLQ_ nc|ENSG00000168385|Q15019-2|SEPTIN2;ENSG00000168385|ENST00000391971|SEPTIN2;ENST00000481500.1_1_2:242277175-242285749:+|nuORF;nc|ENSG00000168385|Q15019-3|SEPTIN2 14.838274106304384 0.4350285940865338 1 {I|L}EN 3 -1 35.56 0.0 0.0 3.2339 0.0 0.0 0.0 740.4044748808974 740.4044748808974 9.618132753936068 0.0 0.0 0.0 0 0.3494850021680094 0.6575773191777937 0.3807196863200844 0.0 {I|L}EN 3.2339 - 245 + 1 2.238 110085.3 1.0 1524 3260 4783 DOHH2_400M_050219_1,4786 DOHH2_400M_050219_1,4786,IDHKHPLLQ False False VENPEHNDF 25.367268 550.813342273235 424764.5625 4783.0 nc|ENSG00000168385|Q15019-2|SEPTIN2;;ENSG00000168385|ENST00000391971|SEPTIN2;;ENST00000481500.1_1_2:242277175-242285749:+|nuORF;;nc|ENSG00000168385|Q15019-3|SEPTIN2 3.0950660705566406 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4788 25.373 156.0 303580.0 25 0 39021.0 + -1 SSDDSKLEY 9 80 522.230311947848 1042.446070962496 2 522.2302123904228 MULTI CID FTMS 0 0 0 4787 270465.53125 0.1447755752819201 6 -0.178192138671875 1 Carbamidomethyl (C) _SSDLC(Carbamidomethyl (C))WIY_ ENSG00000114331|ENST00000326793|ACAP2 14.581692164780916 0.6954967302934248 1 {[CA]|SS}DD 4 -1 20.445 0.0 0.0 1.9613 0.0 0.0 0.0 635.3055047088592 635.3055047088592 3.455612550363796 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[CA]|SS}DD 1.9613 - 106 + 1 2.238 43642.8 1.0 1525 3261 4787 DOHH2_400M_050219_1,4788 DOHH2_400M_050219_1,4788,SSDLCWIY False False SSDDSKLEY 25.372759 522.230212390423 9984204.0 4787.0 ENSG00000114331|ENST00000326793|ACAP2 5.25428040822347 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4789 25.387 800.0 142270.0 25 0 12426.0 + 36952 TEYPVQRNY 9 120 585.2827610993312 1168.5509692654623 2 585.2833740115166 MULTI CID FTMS 0 0 0 4787 97259.296875 0.3744562361216587 4 -0.1170825958251953 2 Unmodified _TEYPVQRNY_ ENSG00000133030|ENST00000651222|MPRIP;nc|ENSG00000133030|Q6WCQ1-2|MPRIP;nc|ENSG00000133030|Q6WCQ1-3|MPRIP;nc|ENSG00000133030|Q6WCQ1|MPRIP 46.020951573049366 0.0490941689151868 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YR]VPY[DP] 9 6 + 50.212 0.0 0.0 4.2969 4.2969 77.187 0.0 0.0 0.0 4.884381005764311 4.884381005764311 4.884381005764311 4.884381005764311 0 1.0 1.0969100130080565 0.7614393726401688 0.8494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YR]VPY[DP];{[ET]|[MV]}YPVQ[RN]Y;{[DA]|[EG]}[HK]QVPY[DP];{[ET]|[MV]}YPV[AG][RN]Y;{[DA]|[EG]}[HK][AG]VPY[DP];{[ET]|[MV]}[Q{I|L}]{I|L}{[CA]|SS}Y[QT];{[ET]|[MV]}[Q{I|L}]N[TA]Y{[ET]|[MV]};{[ET]|[MV]}[Q{I|L}]MRY[QT];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YR]V{[QD]|[EN]|[WG]|[KD]|[RS]}[QT];[EP]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}WW[DP] 4.2969;3.879;3.4412;3.091;2.6569;1.0305;0.92344;0.49336;0.45801;0.14591 -;+;-;-;-;-;-;-;-;- + 247 1 2.238 87871.2 0.6800000071525574 1526 3261 4787 DOHH2_400M_050219_1,4789 DOHH2_400M_050219_1,4789,TEYPVQRNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4790 25.391 229.0 191630.0 25 0 14677.0 + 379 AEDKENYKKFY 11 70 478.901641596166 1433.683095388698 3 479.2361022830009 MULTI CID FTMS 0 0 0 4787 163627.3125 1.0 0 0.0 3 Unmodified _AEDKENYKKFY_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 21.799462835604743 0.5803446114589816 1 K{M(Oxidation (M))|F}Y 3 8 14.983 0.0 0.0 1.045 0.0 0.0 977.44540521689 0.0 977.44540521689 0.0 3.7236374744834695 0.0 0.0 0 0.0 0.0 0.0 0.0 + K{M(Oxidation (M))|F}Y 1.045 + + 101 + 1 2.238 40698.6 1.0 1527 3261 4787 DOHH2_400M_050219_1,4790 DOHH2_400M_050219_1,4790,AEDKENYKKFY False True AEDKENYKKFY 25.390903 478.9021 1023774.4375 4787.0 ENSG00000096384|ENST00000371646|HSP90AB1;;nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1 5.865306218465169 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4792 25.403 551.0 187570.0 25 0 29057.0 + 43435 WSDSPGQHY 9 124 538.7245732208403 1075.4345935084805 2 538.7260619997978 MULTI CID FTMS 0 0 0 4791 133998.625 0.9879647015575236 2 -0.04156494140625 1 Unmodified _WSDSPGQHY_ ENSG00000160999|ENST00000444095|SH2B2;nc|ENSG00000160999|O14492-2|SH2B2 41.8396318013385 0.0653578398400075 1 WSDSP{[QG]|[NA]}HY 9 0 + 66.903 0.0 0.0 6.2211 6.2211 90.306 0.0 0.0 0.0 43.705616853139325 1.4466666178254712 1.4466666178254712 10.726825097560416 0 0.3494850021680094 1.3979400086720375 0.4247425010840047 0.2742275032520141 + + WSDSP{[QG]|[NA]}HY;WSDS[KT][CS]Y;WSDSY[HA][NP];WSDSP{[WS]|[C(Carbamidomethyl (C)){I|L}]}[DP];WSDSY[HQ][PG];WSDNA[PS]HY;WSDSY[HA]G[PG];WS[YT][YG]HY;{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[ET]|[MV]}PSDS[PA];{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PSDS[PA] 6.2211;5.2236;5.092;4.5832;4.3262;4.1722;3.955;3.7839;3.7298;3.7137 +;-;-;-;-;-;-;-;-;- + 722 + 1 2.238 82544.5 1.0 1528 3262 4791 DOHH2_400M_050219_1,4792 DOHH2_400M_050219_1,4792,WSDSPGQHY True True WSDSPGQHY 25.403013 538.726061999798 810607.8125 4791.0 ENSG00000160999|ENST00000444095|SH2B2;;nc|ENSG00000160999|O14492-2|SH2B2 8.24572785695394 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4793 25.405 72.0 519770.0 25 0 32722.0 + 42362 VTDGPGNYKY 10 73 557.2640389005724 1112.5135248679446 2 557.2641479372978 MULTI CID FTMS 0 0 0 4791 473036.03125 0.5627481027844169 -4 0.1350059509277343 2 Unmodified _VTDGPGNYKY_ ENSG00000088812|ENST00000262919|ATRN;nc|ENSG00000088812|O75882-2|ATRN;nc|ENSG00000088812|O75882-3|ATRN 26.268140514670165 0.3785003716575977 1 VTDG{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}P 8 6 63.008 0.0 0.0 5.6636 0.0 0.0 0.0 209.09314905338127 209.09314905338127 47.523656471886326 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VTDG{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}P 5.6636 - 87 + 1 2.238 35550.9 1.0 1529 3262 4791 DOHH2_400M_050219_1,4793 DOHH2_400M_050219_1,4793,VTDGPGNYKY False True VTDGPGNYKY 25.404709 557.264147937298 11404565.0 4791.0 ENSG00000088812|ENST00000262919|ATRN;;nc|ENSG00000088812|O75882-3|ATRN;;nc|ENSG00000088812|O75882-2|ATRN 7.25799576441447 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4794 25.409 199.0 493240.0 25 0 28712.0 + 29042 QEGKLDRTF 9 116 365.1930298634598 1092.5572601905794 3 365.1926757693291 MULTI CID FTMS 0 0 0 4791 246384.875 0.5706629616075896 -3 0.0951080322265625 3 Unmodified _QEGKLDRTF_ ENSG00000065518|ENST00000184266|NDUFB4;ENST00000485064.1_1_3:120321042-120321114:+|nuORF 17.44264345198275 0.3645313841742926 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GK{I|L}DRT{M(Oxidation (M))|F} 9 0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} + + 36.943 7.7137 3.0003 3.3813 3.3813 51.371 0.0 0.0 0.0 0.0 15.973732280301787 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GK{I|L}DRT{M(Oxidation (M))|F} 3.3813 + + 114 + 1 2.238 84904.0 1.0 1530 3262 4791 DOHH2_400M_050219_1,4794 DOHH2_400M_050219_1,4794,QEGKLDRTF False True QEGKLDRTF 25.408505 365.192675769329 2411151.75 4791.0 ENST00000485064.1_1_3:120321042-120321114:+|nuORF;;ENSG00000065518|ENST00000184266|NDUFB4 4.87782088915507 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4795 25.411 113.0 541810.0 25 0 32201.0 7630 EIVVKGDEVI 10 97 367.5447698886504 1099.6124802661511 3 367.5447265505791 MULTI CID FTMS 0 0 0 4791 218710.03125 0.9485254983819942 1 -0.020059585571289 4 Unmodified _EIVVKGDEVI_ ENSG00000134371|ENST00000367435|CDC73 16.149105407346934 0.5765757077271437 1 {I|L} 1 9 16.281 0.0 0.0 1.4807 0.0 0.0 968.5172634466184 0.0 968.5172634466184 0.0 0.9247782126794846 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {I|L} 1.4807 + + 32 + 1 2.238 56408.6 1.0 1531 3262 4791 DOHH2_400M_050219_1,4795 DOHH2_400M_050219_1,4795,EIVVKGDEVI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4797 25.417 132.0 395210.0 25 0 27667.0 + 35202 SSDNATLTHY 10 92 554.7486362881507 1107.4827196431013 2 554.7490722537041 MULTI CID FTMS 0 0 0 4796 363695.65625 0.178618023532604 5 -0.1813678741455078 1 Unmodified _SSDNATLTHY_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 106.94017166704064 0.0046191154308253 1 {[CA]|SS}DNAT{I|L}THY 10 0 {[CA]|SS} + + 74.065 6.6109 3.7979 6.6877 6.6877 62.292 0.0 0.0 0.0 0.0 41.01805419770287 0.0 0.0 0 1.4916440611282626 0.0 0.7742275032520141 0.7742275032520141 + + {[CA]|SS}DNAT{I|L}THY 6.6877 + + 248 + 1 2.239 41980.6 1.0 1532 3263 4796 DOHH2_400M_050219_1,4797 DOHH2_400M_050219_1,4797,SSDNATLTHY True True SSDNATLTHY 25.417417 554.749072253704 20125584.0 4796.0 ENSG00000108021|ENST00000695737|TASOR2;;nc|ENSG00000108021|Q5VWN6-2|TASOR2 9.48240073521932 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4798 25.42 105.0 466660.0 25 0 30263.0 -1 0 92 548.2912747674399 547.2839983008398 1 548.2910644412041 MULTI CID FTMS 0 0 0 4796 555082.0625 0.881042257785407 -2 0.0437164306640625 2 1 Y 1 -1 13.495 0.0 0.0 2.4658 0.0 0.0 366.2096097283773 0.0 366.2096097283773 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.4658 - 7 + 1 2.239 42682.4 1.0 1533 3263 4796 DOHH2_400M_050219_1,4798 DOHH2_400M_050219_1,4798, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4799 25.422 124.0 784690.0 25 0 68601.0 + 44203 YLGAKPRSL 9 83 502.79823925857534 1003.5819255839508 2 502.7981140017509 MULTI CID FTMS 0 0 0 4796 465918.625 0.5839051671395407 -2 0.0437164306640625 3 Unmodified _YLGAKPRSL_ ENSG00000132819|ENST00000356208|RBM38;nc|ENSG00000132819|Q9H0Z9-2|RBM38 26.268140514670165 0.1969607489560049 1 Y{I|L}GAK 5 4 63.443 0.0 0.0 6.3217 0.0 0.0 0.0 468.2573090610365 468.2573090610365 50.25576261223691 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + Y{I|L}GAK 6.3217 + + 120 + 1 2.239 77413.3 1.0 1534 3263 4796 DOHH2_400M_050219_1,4799 DOHH2_400M_050219_1,4799,YLGAKPRSL False True YLGAKPRSL 25.422215 502.798114001751 8139734.5 4796.0 ENSG00000132819|ENST00000356208|RBM38;;nc|ENSG00000132819|Q9H0Z9-2|RBM38 7.885706106821696 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4800 25.432 579.0 167610.0 25 0 18428.0 32917 SEKLCRAQ 8 113 467.7411648194058 933.4677767056116 2 467.7400390505791 MULTI CID FTMS 0 0 0 4796 105541.6875 1.0 0 0.0 4 Unmodified _SEKLCRAQ_ ENSG00000164898|ENST00000297534|FMC1;ENST00000481123.1_1_7:139025293-139030447:+|nuORF;nc|ENSG00000164898|Q96HJ9-2|FMC1 16.942295170755138 0.6606234159769251 1 {I|L}Q 2 6 34.024 0.0 0.0 3.6449 0.0 0.0 674.3145917464304 0.0 674.3145917464304 0.0 22.240985386552392 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3807196863200844 {I|L}Q 3.6449 - 64 + 1 2.239 77665.7 1.0 1535 3263 4796 DOHH2_400M_050219_1,4800 DOHH2_400M_050219_1,4800,SEKLCRAQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4802 25.449 800.0 64720.0 25 0 9872.5 -1 0 49 1123.367638108682 2244.7207232841643 2 1123.867968738079 MULTI CID FTMS 0 0 0 4801 123527.109375 0.4682252389325812 5 -0.1738739013671875 1 1 N 1 -1 3.4949 0.0 0.0 0.15569 0.0 0.0 1723.5473356882642 404.11979307344575 2127.66712876171 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.15569 - 10 + 1 2.239 44519.6 0.4900000095367431 1536 3264 4801 DOHH2_400M_050219_1,4802 DOHH2_400M_050219_1,4802, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4803 25.463 800.0 143790.0 25 0 26891.0 32578 SAVAWAMANYI 11 137 598.7933762815137 1195.5721996298273 2 598.7943603396416 MULTI CID FTMS 0 0 0 4801 103461.890625 0.9641376565926628 1 -0.0518608093261718 2 Unmodified _SAVAWAMANYI_ nc|ENSG00000139163|Q9HBU6-2|ETNK1;nc|ENSG00000139163|Q9HBU6|ETNK1 26.268140514670165 0.4754186812857754 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NASA[YT]{I|L}Y 10 8 + 44.034 0.0 0.0 3.6831 3.6831 76.849 0.0 0.0 0.0 28.485158516000844 5.489634511125061 5.489634511125061 6.62333977875911 0 0.0 0.0 1.341129063296272 0.4247425010840047 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NASA[YT]{I|L}Y;[TA][H{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[VS]{[ES]|[DT]|[{I|L}C]}SAN{I|L}Y;[TA][Q{I|L}]{[ES]|[DT]|[{I|L}C]}SAN{I|L}Y;[TA][KG][NS]ASAN{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}GGASA[YT]{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{I|L}Y;[VG]A[VS]{[ES]|[DT]|[{I|L}C]}SAN{I|L}Y;[PS][PG]KYSAN{I|L}Y;[PG][PS]KYSAN{I|L}Y 3.6831;3.1291;3.0141;2.9381;2.8031;2.5613;2.5185;2.4554;2.3951;2.3019 -;-;-;-;-;-;-;-;-;- 446 + 1 2.239 90149.9 0.5600000023841858 1537 3264 4801 DOHH2_400M_050219_1,4803 DOHH2_400M_050219_1,4803,SAVAWAMANYI False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4804 25.473 623.0 218650.0 25 0 18304.0 + 8700 EVKPKVEAI 9 152 506.8056895485621 1011.596826163924 2 506.8053161501884 MULTI CID FTMS 0 0 0 4801 91861.8671875 0.4933048624409848 -3 0.0652217864990234 3 Unmodified _EVKPKVEAI_ ENSG00000100592|ENST00000360909|DAAM1;nc|ENSG00000100592|Q9Y4D1|DAAM1 38.17557092003332 0.0854718145212029 1 {NN|[MP]|[D{I|L}]|[EV]}KPAK 6 4 39.301 0.0 0.0 3.885 0.0 0.0 0.0 356.1813347911304 356.1813347911304 23.104896389405948 0.0 0.0 0.0 0 1.3182503180159344 2.0 1.2728787452803376 0.0 {NN|[MP]|[D{I|L}]|[EV]}KPAK 3.885 - 777 1 2.239 105645.9 1.0 1538 3264 4801 DOHH2_400M_050219_1,4804 DOHH2_400M_050219_1,4804,EVKPKVEAI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4805 25.479 305.0 152790.0 25 0 14099.0 + 26617 NVRQNYVT 8 82 497.26019838072045 0 497.2596008181572 PEAK CID FTMS 0 0 0 4801 127101.359375 0.990346766800874 -1 0.0215053558349609 4 Unmodified _NVRQNYVT_ REV__ENSG00000171551|ENST00000304546|ECEL1;REV__nc|ENSG00000171551|O95672-2|ECEL1 9.347437153973935 0.5488964601725408 1 V 1 -1 5.4846 0.0 0.0 0.5526 0.0 0.0 131.08282244327842 759.3339327447874 890.4167551880657 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.5526 + + 11 + 1 2.239 38906.5 1.0 1539 3264 4801 DOHH2_400M_050219_1,4805 DOHH2_400M_050219_1,4805,NVRQNYVT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4806 25.484 280.0 154260.0 25 0 10173.0 -1 STMSTNGIPR 10 96 540.2612219530781 1078.507890972956 2 540.2694579958916 MULTI CID FTMS 0 0 0 4801 121113.78125 0.3298441452687832 23 -0.9600238800048828 5 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 11.494710602746466 0.654671931888957 1 S{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 1.5256 0.0 0.0 826.3969881182671 0.0 826.3969881182671 0.0 4.146518864155127 0.0 0.0 0 0.0 0.0 0.0 0.0 S{M(Oxidation (M))|F} 1.5256 - 111 + 1 2.239 39188.1 1.0 1540 3264 4801 DOHH2_400M_050219_1,4806 DOHH2_400M_050219_1,4806,STMSTNGIPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4808 25.489 110.0 560430.0 25 0 38892.0 + 22832 LRQRSVALEL 10 92 395.5753109719443 1183.704103516033 3 395.5751220583916 MULTI CID FTMS 0 0 0 4807 388176.125 0.3165005096464905 4 -0.1220130920410156 1 Unmodified _LRQRSVALEL_ ENSG00000132768|ENST00000255108|DPH2;ENST00000490861.5_1_1:44435799-44436893:+|nuORF;nc|ENSG00000132768|Q9BQC3-2|DPH2 16.149105407346934 0.5765757077271437 1 E{I|L} 2 8 25.217 0.0 0.0 2.1303 0.0 0.0 923.5658763779492 0.0 923.5658763779492 0.0 16.347659602351143 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + E{I|L} 2.1303 + + 30 1 2.239 54417.2 1.0 1541 3265 4807 DOHH2_400M_050219_1,4808 DOHH2_400M_050219_1,4808,LRQRSVALEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4809 25.494 250.0 264010.0 25 0 55852.0 39426 VALSLLEAF 9 74 481.7803827170905 961.5462125009808 2 481.7802917361259 MULTI CID FTMS 0 0 0 4807 177439.171875 0.346054283935535 4 -0.1220130920410156 2 Unmodified _VALSLLEAF_ ENST00000322535.10_2_11:65830982-65831169:+|nuORF 9.347437153973935 0.588369872918737 1 A{M(Oxidation (M))|F} 2 7 13.979 0.0 0.0 1.4538 0.0 0.0 725.4294044949247 0.0 725.4294044949247 0.0 9.3753063169585 0.0 0.0 0 0.0 0.0 0.0 0.0 + A{M(Oxidation (M))|F} 1.4538 + + 27 + 1 2.239 56199.2 1.0 1542 3265 4807 DOHH2_400M_050219_1,4809 DOHH2_400M_050219_1,4809,VALSLLEAF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4810 25.508 800.0 193480.0 25 0 18468.0 + -1 SQDHGQELMYQ 11 135 676.2817333475875 1350.548913761975 2 676.2810546755791 MULTI CID FTMS 0 0 0 4807 171109.234375 0.8385139875212845 -2 0.0733661651611328 3 Oxidation (M) _SQDHGQELM(Oxidation (M))YQ_ REV__ENSG00000169594|ENST00000345382|BNC1 29.84058131909904 0.3915366693542702 1 [HD]EAQQDA{M(Oxidation (M))|F}YQ 11 -1 + 117.82 0.0 0.0 8.724 8.724 92.172 0.0 0.0 0.0 5.862435673934286 92.74596508280824 5.862435673934286 9.128498242811006 0 1.7302046884880935 0.0 2.093569022618561 1.1861818737241734 [HD]EAQQDA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QDA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]DA{M(Oxidation (M))|F}YQ;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQDA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QDA{M(Oxidation (M))|F}YQ;[HD]EA[AG][AG]DA{M(Oxidation (M))|F}YQ;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[AG]DA{M(Oxidation (M))|F}YQ;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[AG]QDA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K][AG]DA{M(Oxidation (M))|F}YQ;[YE]{[WT]|[RM]}EDA{M(Oxidation (M))|F}YQ 8.724;8.0481;8.0481;6.6183;6.5342;6.4961;5.9424;5.9424;5.8556;5.6823 -;-;-;-;-;-;-;-;-;- 5325 1 2.239 116013.9 0.699999988079071 1543 3265 4807 DOHH2_400M_050219_1,4810 DOHH2_400M_050219_1,4810,SQDHGQELMYQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4811 25.521 800.0 131290.0 25 0 13519.0 6692 ECKECRKCFYQ 11 100 775.829432134126 1549.644311335052 2 775.8289672732353 MULTI CID FTMS 0 0 0 4807 107753.875 0.3257525529749264 -4 0.1170825958251953 4 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 41.95555342248728 0.1822715950200113 1 [HD]EAQAQQDA{M(Oxidation (M))|F}YQ 13 9 + 117.76 0.0 0.0 7.5991 7.5991 88.363 0.0 0.0 0.0 0.9119351956604334 101.9574168486604 0.9119351956604334 6.197887582883936 0 2.20597718523608 0.0 1.3737125054200234 1.6549471895720984 [HD]EAQAQQDA{M(Oxidation (M))|F}YQ;[HD][QA]EAQQDA{M(Oxidation (M))|F}YK;{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]EAQQDA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]AQQDA{M(Oxidation (M))|F}YQ;[HD]EAQAQ[AG]DA{M(Oxidation (M))|F}YQ;[HD]EAQA[AG]QDA{M(Oxidation (M))|F}YK;[HD]EA[AG]AQQDA{M(Oxidation (M))|F}YQ;[HD][QA]AEQQDA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]AEQQDA{M(Oxidation (M))|F}YQ;[YE]{[ET]|[MV]}EQQDA{M(Oxidation (M))|F}YQ 7.5991;7.1992;7.1366;7.0454;7.0137;7.0137;7.0137;6.795;6.7325;6.6413 -;-;-;-;-;-;-;-;-;- 7532 1 2.239 81303.3 0.5299999713897705 1544 3265 4807 DOHH2_400M_050219_1,4811 DOHH2_400M_050219_1,4811,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4812 25.535 800.0 126060.0 25 0 9332.3 + 10648 FVQLCPYKGQG 11 120 620.3130774713335 1238.6116020094669 2 620.3128539919853 MULTI CID FTMS 0 0 0 4807 105754.8671875 0.1853760451709517 45 -1.969289779663086 5 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 1 [PA]PMPPPPPPQN 12 -1 [PA]PM + + 74.991 10.221 2.5798 6.0544 6.0544 60.472 0.0 0.0 0.0 0.0 51.39819212507713 0.0 0.0 0 2.6989700043360187 0.0 0.0 1.4916440611282624 [PA]PMPPPPPPQN 6.0544 - 1927 + 1 2.239 77872.5 0.5799999833106995 1545 3265 4807 DOHH2_400M_050219_1,4812 DOHH2_400M_050219_1,4812,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4814 25.54 95.0 399860.0 25 0 25827.0 + 8168 EPQAKNISV 9 72 493.26942203458 984.52429113596 2 493.2693969607353 MULTI CID FTMS 0 0 0 4813 352258.28125 0.2439236903799987 5 -0.1325206756591797 1 Unmodified _EPQAKNISV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF 6.2057823575117 0.6980434486082533 1 {I|L}NKAQ 5 8 20.177 0.0 0.0 2.0494 0.0 0.0 222.1206178955287 205.0620516412719 427.18266953680063 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}NKAQ 2.0494 - 79 + 1 2.239 34143.5 1.0 1546 3266 4813 DOHH2_400M_050219_1,4814 DOHH2_400M_050219_1,4814,EPQAKNISV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4815 25.545 288.0 246910.0 25 0 13873.0 -1 VDTPIMTK 8 117 460.7415121188164 919.4684713044328 2 460.7417175173759 MULTI CID FTMS 0 0 0 4813 201506.125 0.9333593975093464 2 -0.0569610595703125 2 Oxidation (M) _VDTPIM(Oxidation (M))TK_ ENSG00000143971|ENST00000272342|ETAA1 27.628801355627647 0.4629596117395134 1 [DV]TP{I|L}T{M(Oxidation (M))|F}K 8 -1 + 35.87 0.0 0.0 3.9012 3.9012 73.308 0.0 0.0 0.0 6.989700043360188 2.747010569416325 2.747010569416325 2.747010569416325 0 0.5774509799928715 0.0 0.6694451763165201 0.0 [DV]TP{I|L}T{M(Oxidation (M))|F}K;[DV]TP{I|L}T{M(Oxidation (M))|F}Q 3.9012;3.6024 -;- 197 + 1 2.239 58207.0 1.0 1547 3266 4813 DOHH2_400M_050219_1,4815 DOHH2_400M_050219_1,4815,VDTPIMTK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4817 25.554 338.0 251590.0 25 0 13227.0 + 5952 DQKDHAVF 8 128 480.23286064730814 958.4511683614164 2 480.2317077517509 MULTI CID FTMS 0 0 0 4816 204906.4375 0.1940236968496285 -6 0.178192138671875 1 Unmodified _DQKDHAVF_ ENSG00000086061|ENST00000330899|DNAJA1;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;ENST00000495015.5_1_9:33025323-33036160:+|nuORF;nc|ENSG00000086061|P31689-2|DNAJA1 52.268347100219714 0.1285778651304833 1 K[DG]AV{M(Oxidation (M))|F} 6 3 36.304 0.0 0.0 3.7878 0.0 0.0 323.122362205275 0.0 323.122362205275 0.0 19.31417813229345 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.3807196863200844 K[DG]AV{M(Oxidation (M))|F} 3.7878 - 488 1 2.239 67083.2 1.0 1548 3267 4816 DOHH2_400M_050219_1,4817 DOHH2_400M_050219_1,4817,DQKDHAVF False True DQKDHAVF 25.553966 480.231707751751 5988740.5 4816.0 ENST00000495015.5_1_9:33025323-33036160:+|nuORF;;nc|ENSG00000086061|P31689-2|DNAJA1;;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;;ENSG00000086061|ENST00000330899|DNAJA1 5.968647480010986 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4818 25.568 800.0 44940.0 25 0 4876.0 -1 0 40 1071.1313203539562 3210.372131662069 3 1071.798266589642 MULTI CID FTMS 0 0 0 4816 117709.9296875 0.9183922250456305 2 -0.0609035491943359 2 1 YC(Carbamidomethyl (C)) 2 -1 9.464 0.0 0.0 0.29479 0.0 0.0 971.3208606175098 1912.9616182916627 2884.2824789091724 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YC(Carbamidomethyl (C)) 0.29479 - 4 + 1 2.239 35535.1 0.4699999988079071 1549 3267 4816 DOHH2_400M_050219_1,4818 DOHH2_400M_050219_1,4818, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4819 25.582 800.0 108960.0 25 0 4612.7 + 29180 QGDDTKRCLTN 11 122 625.7920887388408 1249.5696245444817 2 625.7919799685478 MULTI CID FTMS 0 0 0 4816 112323.046875 0.9612304037992048 -2 0.0611095428466796 3 Unmodified _QGDDTKRCLTN_ REV__ENSG00000115760|ENST00000421745|BIRC6 34.93206674587334 0.2904649469012649 1 DG{M(Oxidation (M))|F}{I|L}QS 6 -1 32.382 0.0 0.0 2.5915 0.0 0.0 584.2651844709 0.0 584.2651844709 0.0 14.121376149595672 0.0 0.0 0 0.5242275032520141 0.0 0.3494850021680094 0.0 DG{M(Oxidation (M))|F}{I|L}QS 2.5915 - 100 1 2.239 72821.4 0.6000000238418579 1550 3267 4816 DOHH2_400M_050219_1,4819 DOHH2_400M_050219_1,4819,QGDDTKRCLTN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4820 25.592 602.0 200200.0 25 0 10795.0 + 8372 ESDPAYQQY 9 162 550.7313886462446 1099.448224359289 2 550.7305175662041 MULTI CID FTMS 0 0 0 4816 97416.6015625 0.3875427446734541 -3 0.1129703521728515 4 Unmodified _ESDPAYQQY_ ENSG00000155660|ENST00000652332|PDIA4 46.020951573049366 0.0490941689151868 1 [PA]D{[ES]|[DT]|[{I|L}C]}YQ[YQ] 9 4 + 25.494 0.0 0.0 2.3188 2.3188 74.971 0.0 0.0 0.0 0.4487194761112114 -0.079507943632425 -0.079507943632425 8.137148261758433 0 0.3494850021680094 0.585026652029182 0.9247425010840048 0.0 [PA]D{[ES]|[DT]|[{I|L}C]}YQ[YQ];[HT]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YQ[YQ];{[DA]|[EG]}P{[ES]|[DT]|[{I|L}C]}YQ[YQ];[PA]D{[ES]|[DT]|[{I|L}C]}Y[AG][YQ];[DP]A{[ES]|[DT]|[{I|L}C]}YQ[YQ];[HT]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y[AG][YQ];{[DA]|[EG]}P{[ES]|[DT]|[{I|L}C]}Y[AG][YQ];[DP]A{[ES]|[DT]|[{I|L}C]}Y[AG][YQ] 2.3188;1.5787;1.528;1.4812;1.09;0.73622;0.69043;0.2525 -;-;-;-;-;-;-;- 705 1 2.239 95494.4 1.0 1551 3267 4816 DOHH2_400M_050219_1,4820 DOHH2_400M_050219_1,4820,ESDPAYQQY True True ESDPAYQQY 25.592195 550.730517566204 1336748.0 4816.0 ENSG00000155660|ENST00000652332|PDIA4 7.485098838806152 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4822 25.598 73.0 503500.0 25 0 60978.0 + 597 AEIVEGENHTY 11 57 631.2884051830819 1260.5622574329636 2 631.2887451052666 MULTI CID FTMS 0 0 0 4821 660047.0 0.3213491222985926 3 -0.0755596160888671 1 Unmodified _AEIVEGENHTY_ ENSG00000196924|ENST00000369850|FLNA;ENST00000474358.5_1_X:153580213-153581146:-|nuORF;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;nc|ENSG00000196924|P21333-2|FLNA 47.7319792270244 0.130190323903946 1 {[CP]|[EA]}{I|L}V{M(Oxidation (M))|F}YT 7 6 46.515 0.0 0.0 3.69 0.0 0.0 0.0 434.14280275994525 434.14280275994525 27.5869662711046 0.0 0.0 0.0 0 0.805462187404089 0.0 0.8494850021680094 0.0 {[CP]|[EA]}{I|L}V{M(Oxidation (M))|F}YT 3.69 - 161 + 1 2.252 35392.0 1.0 1552 3268 4821 DOHH2_400M_050219_1,4822 DOHH2_400M_050219_1,4822,AEIVEGENHTY False True AEIVEGENHTY 25.597799 631.288745105267 22765112.0 4821.0 ENSG00000196924|ENST00000369850|FLNA;;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;;ENST00000474358.5_1_X:153580213-153581146:-|nuORF;;nc|ENSG00000196924|P21333-2|FLNA 9.203373273213703 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4823 25.606 476.0 144730.0 25 0 11646.0 + 45296 YSEGYPGQRY 10 113 610.2722736758006 1218.5299944184012 2 610.2681152224541 MULTI CID FTMS 0 0 0 4821 125263.296875 0.0449160224531172 11 -0.448648452758789 2 Unmodified _YSEGYPGQRY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 47.594388314883695 0.0942698883389255 1 YSEGYP[RN]AY 10 3 + 92.846 0.0 0.0 7.6195 7.6195 94.169 0.0 0.0 0.0 21.110469015915783 12.886858533908423 12.886858533908423 12.886858533908423 0 1.579689690656103 1.6989700043360187 0.3807196863200844 0.2887254899964357 YSEGYP[RN]AY;YSEGYP[RN]{M(Oxidation (M))|F}S;TDYGYP[RN]AY;YSWYY{[QN]|[E{I|L}]|[KN]}VP;YSE{[ET]|[MV]}S[RN]AY;YSEG[KT]WWY;YSW[KT][WD]AY;TDYGYP[RN]{M(Oxidation (M))|F}S;YSE{[ET]|[MV]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AY;YSEA[KS]WWY 7.6195;6.5619;5.887;5.152;5.1036;4.966;4.8612;4.8295;4.53;4.3703 -;-;-;-;-;-;-;-;-;- 473 + 1 2.252 55720.7 1.0 1553 3268 4821 DOHH2_400M_050219_1,4823 DOHH2_400M_050219_1,4823,YSEGYPGQRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4825 25.613 201.0 334320.0 25 0 29293.0 -1 VLFVEDGKME 10 103 591.7898033345947 1181.5650537359893 2 591.7903320193291 MULTI CID FTMS 0 0 0 4824 183725.234375 0.588632465514053 -6 0.1953792572021484 1 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 15.248480904072842 0.5916873121453583 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KG[K{I|L}]G{[CP]|[EA]}W 10 -1 + 33.957 0.0 0.0 2.8739 2.8739 75.334 0.0 0.0 0.0 21.192847234219165 0.630676131639369 0.630676131639369 7.257724967479859 0 1.274227503252014 0.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KG[K{I|L}]G{[CP]|[EA]}W;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KV[KA]G{[CP]|[EA]}W;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KV[KQ]{[CP]|[EA]}W 2.8739;2.2597;1.7068 -;-;- 81 + 1 2.252 57206.2 1.0 1554 3269 4824 DOHH2_400M_050219_1,4825 DOHH2_400M_050219_1,4825,VLFVEDGKME False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4826 25.619 361.0 437210.0 25 0 53147.0 + 6378 DWAKLIKRL 9 127 381.5741831463996 1141.700720039399 3 381.5739623904228 MULTI CID FTMS 0 0 0 4824 198302.6875 0.0147039454829876 -6 0.1953792572021484 2 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 7.608950283845883 0.6490595679007971 1 K{I|L}KQPE 6 -1 37.652 0.0 0.0 3.2978 0.0 0.0 400.27949427713617 0.0 400.27949427713617 0.0 25.133418048066787 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}KQPE 3.2978 - 78 1 2.252 130804.4 1.0 1555 3269 4824 DOHH2_400M_050219_1,4826 DOHH2_400M_050219_1,4826,DWAKLIKRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4827 25.633 800.0 104440.0 25 0 9566.6 -1 0 67 963.0957036419586 2886.265281526076 3 963.4290649294852 MULTI CID FTMS 0 0 0 4824 122812.234375 0.3582560186913417 -3 0.0709724426269531 3 1 G 1 -1 6.9897 0.0 0.0 0.24217 0.0 0.0 2121.364354867676 704.8441256158811 2826.208480483557 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.24217 - 16 + 1 2.252 66323.8 0.5 1556 3269 4824 DOHH2_400M_050219_1,4827 DOHH2_400M_050219_1,4827, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4829 25.641 277.0 227140.0 25 0 23367.0 -1 VTGGMGAVLM 10 90 476.2347823733231 950.4550118134462 2 476.2351257205009 MULTI CID FTMS 0 0 0 4828 106927.53125 0.8841661493261223 1 -0.0348072052001953 1 Oxidation (M) _VTGGM(Oxidation (M))GAVLM_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON 11.640296217721598 0.652229146672156 1 {[TV]|[{I|L}S]}GG 4 -1 40.445 0.0 0.0 4.2554 0.0 0.0 0.0 633.2728975885374 633.2728975885374 28.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}GG 4.2554 + + 24 + 1 2.252 53877.4 1.0 1557 3270 4828 DOHH2_400M_050219_1,4829 DOHH2_400M_050219_1,4829,VTGGMGAVLM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4830 25.651 592.0 157810.0 25 0 8617.5 + 39787 VEQPNQVNY 9 144 545.7629988648611 1089.511444796522 2 545.7633544802666 MULTI CID FTMS 0 0 0 4828 82427.9140625 0.6327917572527166 -1 0.0267410278320312 2 Unmodified _VEQPNQVNY_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 36.12702656103203 0.0967173616627612 1 VNY 3 6 23.901 0.0 0.0 2.1937 0.0 0.0 695.3266436264033 0.0 695.3266436264033 0.0 -1.517412290202671 -1.517412290202671 0.0 0 0.5 0.0 0.0 0.5 + VNY 2.1937 + + 643 + 1 2.252 75476.3 1.0 1558 3270 4828 DOHH2_400M_050219_1,4830 DOHH2_400M_050219_1,4830,VEQPNQVNY True True VEQPNQVNY 25.65097 545.763354480267 693481.0625 4828.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 6.303952693939209 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4831 25.652 61.0 719720.0 25 0 42059.0 + 29009 QEDDRGITY 9 84 548.7487673037697 1095.4829816743393 2 548.7491943240166 MULTI CID FTMS 0 0 0 4828 537304.0 1.0 0 0.0 3 Unmodified _QEDDRGITY_ ENSG00000162139|ENST00000294064|NEU3;nc|ENSG00000162139|Q9UQ49|NEU3 38.17557092003332 0.0854718145212029 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YQ][HK]TY 8 5 + 30.359 0.0 0.0 2.7713 2.7713 81.214 0.0 0.0 0.0 1.1375025195554471 10.526296416230714 1.1375025195554471 20.045260977008144 0 0.6643943297944485 0.0 0.3252574989159953 0.3807196863200844 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YQ][HK]TY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YQ][HK]YT;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YQ]V[PS][{M(Oxidation (M))|F}V] 2.7713;0.94149;0.25561 -;-;- 85 + 1 2.252 38193.6 1.0 1559 3270 4828 DOHH2_400M_050219_1,4831 DOHH2_400M_050219_1,4831,QEDDRGITY True True QEDDRGITY 25.65248 548.749194324017 2677574.75 4828.0 ENSG00000162139|ENST00000294064|NEU3;;nc|ENSG00000162139|Q9UQ49|NEU3 8.14425245920817 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4832 25.656 161.0 322950.0 25 0 27815.0 + 7271 EETHAPNSNW 10 89 592.7520468909132 1183.4895408486263 2 592.7526733279228 MULTI CID FTMS 0 0 0 4828 222740.203125 0.6082678657102583 -2 0.0407524108886718 4 Unmodified _EETHAPNSNW_ ENST00000518169.1_1_8:57124347-57125478:+|nuORF;nc|ENSG00000170791|Q9BUK0-4|CHCHD7 19.256988751693697 0.5244284437930726 1 A[YE]W 4 8 17.664 0.0 0.0 1.4925 0.0 0.0 616.2601892783912 0.0 616.2601892783912 0.0 10.674100046527355 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 A[YE]W 1.4925 - 101 + 1 2.252 43659.1 1.0 1560 3270 4828 DOHH2_400M_050219_1,4832 DOHH2_400M_050219_1,4832,EETHAPNSNW False True EETHAPNSNW 25.655659 592.752673327923 2539891.0 4828.0 nc|ENSG00000170791|Q9BUK0-4|CHCHD7;;ENST00000518169.1_1_8:57124347-57125478:+|nuORF 7.22990878423055 2.0 True 10.0 False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_1 4833 25.666 563.0 147380.0 25 0 9975.7 + 19213 LEGGQEDFESS 11 114 599.2486187338686 1196.4826845345372 2 599.2482177615166 MULTI CID FTMS 0 0 0 4828 102057.6484375 0.4719767124926873 -3 0.0876445770263671 5 Unmodified _LEGGQEDFESS_ CON__P35527;ENSG00000171403|ENST00000246662|KRT9 30.7034409873982 0.3712764582118616 1 {[QN]|[E{I|L}]|[KN]}E{I|L}ED{M(Oxidation (M))|F} 7 6 30.996 0.0 0.0 2.5906 0.0 0.0 0.0 318.0938655250247 318.0938655250247 7.160608391208658 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.805462187404089 0.0 {[QN]|[E{I|L}]|[KN]}E{I|L}ED{M(Oxidation (M))|F} 2.5906 - 550 1 2.252 64685.4 1.0 1561 3270 4828 DOHH2_400M_050219_1,4833 DOHH2_400M_050219_1,4833,LEGGQEDFESS False True LEGGQEDFESS 25.665543 599.248217761517 1159058.125 4828.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 6.845961411794026 2.0 True 11.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 4834 25.668 103.0 554850.0 25 0 53834.0 + 30701 RFRGQKQN 8 95 517.2852793069982 1032.5560056807965 2 517.2844116091728 MULTI CID FTMS 0 0 0 4828 416051.90625 0.199049373754452 36 -1.475910186767578 6 Unmodified _RFRGQKQN_ REV__ENSG00000119777|ENST00000238788|TMEM214;REV__ENST00000478980.1_1_2:27256012-27257182:+|nuORF;REV__ENST00000495312.1_1_2:27255799-27258254:+|nuORF;REV__nc|ENSG00000119777|Q6NUQ4-2|TMEM214 5.230669730166228 0.792582437072536 1 Y 1 -1 10.485 0.0 0.0 1.0154 0.0 0.0 851.4824258241541 0.0 851.4824258241541 0.0 1.3358586420150689 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0154 - 12 + 1 2.252 50183.6 1.0 1562 3270 4828 DOHH2_400M_050219_1,4834 DOHH2_400M_050219_1,4834,RFRGQKQN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4836 25.674 122.0 265920.0 25 0 18082.0 + 42363 VTDGPGNYKY 10 77 557.2640389005724 1112.5135248679446 2 557.2640869021416 MULTI CID FTMS 0 0 0 4835 376366.625 0.4477451825613423 5 -0.2072086334228515 1 Unmodified _VTDGPGNYKY_ ENSG00000088812|ENST00000262919|ATRN;nc|ENSG00000088812|O75882-2|ATRN;nc|ENSG00000088812|O75882-3|ATRN 26.268140514670165 0.3785003716575977 1 VTDG[{I|L}A][C(Carbamidomethyl (C))S]KY 10 4 + 60.327 0.0 0.0 5.4226 5.4226 79.443 0.0 0.0 0.0 45.63461437856928 0.3345298489312966 0.3345298489312966 3.301181751546608 0 0.6694451763165201 2.0 0.4247425010840047 0.0 VTDG[{I|L}A][C(Carbamidomethyl (C))S]KY;VTDG[YG][NP]KY;VTDG[{I|L}A][C(Carbamidomethyl (C))S]P{[HG]|PP};VTD[Q{I|L}][C(Carbamidomethyl (C))S]KY;VTDG[YG][NP]P{[HG]|PP};VTD[YN][NP]KY;VTD[Q{I|L}][C(Carbamidomethyl (C))S]P{[HG]|PP};VTD[YN][NP]P{[HG]|PP} 5.4226;5.1259;4.8694;4.8355;4.5727;4.5387;4.2784;3.9816 -;-;-;-;-;-;-;- 140 + 1 2.265 32962.3 1.0 1563 3271 4835 DOHH2_400M_050219_1,4836 DOHH2_400M_050219_1,4836,VTDGPGNYKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4837 25.68 331.0 234100.0 25 0 17666.0 1435 ALEELLGVFC 10 120 365.1930298634598 1092.5572601905794 3 365.1926757693291 MULTI CID FTMS 0 0 0 4835 27869.7578125 0.0645503849721599 6 -0.2681236267089844 2 Unmodified _ALEELLGVFC_ ENST00000337620.8_1_7:26251923-26252034:+|nuORF 7.910154910731844 0.6900473968920092 1 [{I|L}A][HT]D{I|L} 6 7 23.645 0.0 0.0 2.1642 0.0 0.0 0.0 439.1944653231307 439.1944653231307 10.546218740408904 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A][HT]D{I|L} 2.1642 - 117 1 2.265 69534.6 1.0 1564 3271 4835 DOHH2_400M_050219_1,4837 DOHH2_400M_050219_1,4837,ALEELLGVFC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4839 25.687 250.0 331090.0 25 0 37903.0 + 27601 PLEDMGFIQ 9 84 525.2537457275315 1048.492938521863 2 525.2543212771416 MULTI CID FTMS 0 0 0 4838 197369.78125 0.3504736069082638 -2 0.0472183227539062 1 Unmodified _PLEDMGFIQ_ REV__ENSG00000089639|ENST00000203556|GMIP;REV__nc|ENSG00000089639|Q9P107-2|GMIP 25.399314129420983 0.2080152500878129 1 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q 8 -1 + 47.184 0.0 0.0 4.5002 4.5002 75.712 0.0 0.0 0.0 37.3514532483668 11.232537001399017 11.232537001399017 3.0102999566398125 0 0.9247425010840048 0.0 0.0 0.7302046884880937 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]{I|L}Q;{[QN]|[E{I|L}]|[KN]}{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}Q;{[CA]|SS}{[DA]|[EG]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}{[DA]|[EG]}[C(Carbamidomethyl (C))R]{I|L}Q;{[DA]|[EG]}{[NV]|[RG]}ADG{M(Oxidation (M))|F}{I|L}Q;{[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]Q{I|L};{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]Q{I|L};{[CA]|SS}{[DA]|[EG]}{I|L}[C(Carbamidomethyl (C))R]Q{I|L};{[QN]|[E{I|L}]|[KN]}{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}V]WQ 4.5002;4.2131;3.8235;3.6168;3.3297;2.7069;2.3096;2.0225;1.4262;1.2275 -;-;-;-;-;-;-;-;-;- 206 + 1 2.265 68200.2 1.0 1565 3272 4838 DOHH2_400M_050219_1,4839 DOHH2_400M_050219_1,4839,PLEDMGFIQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4840 25.698 599.0 220970.0 25 0 18511.0 + 24084 LYGAIQARL 9 146 502.79823925857534 1003.5819255839508 2 502.7981750369072 MULTI CID FTMS 0 0 0 4838 75352.8046875 0.0944347138204398 7 -0.3606777191162109 2 Unmodified _LYGAIQARL_ REV__ENSG00000174231|ENST00000304992|PRPF8 21.74664581756881 0.2544899275067181 1 Y{I|L}GAK 5 -1 63.628 0.0 0.0 6.3401 0.0 0.0 0.0 468.2572149907521 468.2572149907521 47.46453351209446 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 Y{I|L}GAK 6.3401 - 406 + 1 2.265 104608.4 1.0 1566 3272 4838 DOHH2_400M_050219_1,4840 DOHH2_400M_050219_1,4840,LYGAIQARL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4841 25.703 287.0 708490.0 25 0 81148.0 + -1 MPKLGKARLI 10 112 571.857428679777 1141.7003044263538 2 571.8576537966728 MULTI CID FTMS 0 0 0 4838 330717.03125 0.1439712608851708 -4 0.0879707336425781 3 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 24.020572477871973 0.4289996903560794 1 {M(Oxidation (M))|F}PQK{I|L}KR{I|L}{I|L} 9 -1 + 58.915 0.0 0.0 5.1603 5.1603 84.875 0.0 0.0 0.0 44.29892428063879 5.480126434555132 5.480126434555132 9.208187539523747 0 1.7689301784845295 0.0 0.0 0.5 {M(Oxidation (M))|F}PQK{I|L}KR{I|L}{I|L};{M(Oxidation (M))|F}P[AG]K{I|L}KR{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QK{I|L}KR{I|L}{I|L};[QP]{M(Oxidation (M))|F}K{I|L}KR{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}[Q{I|L}]RKR{I|L}{I|L};[QP]K{M(Oxidation (M))|F}{I|L}KR{I|L}{I|L} 5.1603;4.3538;2.7523;1.2843;0.69835;0.65202 -;-;-;-;-;- 153 + 1 2.265 157029.6 1.0 1567 3272 4838 DOHH2_400M_050219_1,4841 DOHH2_400M_050219_1,4841,MPKLGKARLI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4842 25.711 435.0 171030.0 25 0 11626.0 + 45220 YRAPGTPTY 9 113 513.2569690503688 1024.4993851675374 2 513.2570678591728 MULTI CID FTMS 0 0 0 4838 132555.4375 0.7570770485629583 3 -0.1468963623046875 4 Unmodified _YRAPGTPTY_ ENSG00000152102|ENST00000389915|FAM168B 45.69961567697781 0.0497987121815769 1 TPTY 4 5 46.23 0.0 0.0 4.5124 0.0 0.0 544.2757435529312 0.0 544.2757435529312 0.0 20.8116097541118 0.0 0.0 0 1.5 0.0 0.3807196863200844 0.0 + TPTY 4.5124 + + 399 1 2.265 63632.7 1.0 1568 3272 4838 DOHH2_400M_050219_1,4842 DOHH2_400M_050219_1,4842,YRAPGTPTY True True YRAPGTPTY 25.71087 513.257067859173 1037013.625 4838.0 ENSG00000152102|ENST00000389915|FAM168B 7.61459477742513 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4843 25.725 800.0 69714.0 25 0 4548.6 -1 NVYCMFTQRSF 11 111 734.819111712345 1467.62367049149 2 734.8185302615166 MULTI CID FTMS 0 0 0 4838 104968.5 0.6363975154102728 -2 0.0472183227539062 5 Carbamidomethyl (C),Oxidation (M) _NVYC(Carbamidomethyl (C))M(Oxidation (M))FTQRSF_ ENSG00000189057|ENST00000343597|FAM111B;nc|ENSG00000189057|Q6SJ93-2|FAM111B 3.2813086475875832 0.8596665074481906 1 NGS{M(Oxidation (M))|F} 4 -1 33.646 0.0 0.0 2.2926 0.0 0.0 1044.4484518409024 0.0 1044.4484518409024 0.0 3.4691001300805624 0.0 0.0 0 0.0 0.0 1.0114393726401687 0.0 NGS{M(Oxidation (M))|F} 2.2926 - 2400 + 1 2.265 43372.9 0.5400000214576721 1569 3272 4838 DOHH2_400M_050219_1,4843 DOHH2_400M_050219_1,4843,NVYCMFTQRSF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4845 25.741 800.0 142710.0 25 0 7705.5 35393 STFINWLNHTN 11 139 673.8259612018487 1345.637369470497 2 673.8273193240166 MULTI CID FTMS 0 0 0 4844 176681.875 1.0 0 0.0 1 Unmodified _STFINWLNHTN_ ENSG00000187554|ENST00000642603|TLR5 41.95555342248728 0.1822715950200113 1 TSQSP[HQ]KSTN 11 9 99.69 0.0 0.0 7.4084 0.0 0.0 132.06761956990982 0.0 132.06761956990982 0.0 70.57227183982407 0.0 0.0 0 0.3494850021680094 0.0 3.162437995416459 1.0994850021680094 TSQSP[HQ]KSTN 7.4084 - 1743 + 1 2.265 86833.5 0.5199999809265137 1570 3273 4844 DOHH2_400M_050219_1,4845 DOHH2_400M_050219_1,4845,STFINWLNHTN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4846 25.744 161.0 672780.0 25 0 45033.0 + 13779 HSHPRVVEL 9 120 358.5333723365737 1072.578287609921 3 358.5329467654228 MULTI CID FTMS 0 0 0 4844 238993.453125 0.6031095137454063 -1 0.044534683227539 2 Unmodified _HSHPRVVEL_ ENSG00000111052|ENST00000552864|LIN7A;ENSG00000148943|ENST00000278193|LIN7C 27.628801355627647 0.1796483985696185 1 EHSH{I|L} 5 6 29.438 0.0 0.0 2.7446 0.0 0.0 451.29100234199376 0.0 451.29100234199376 0.0 23.953650195120844 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 EHSH{I|L} 2.7446 - 129 1 2.265 91915.4 1.0 1571 3273 4844 DOHH2_400M_050219_1,4846 DOHH2_400M_050219_1,4846,HSHPRVVEL False True HSHPRVVEL 25.744261 358.532946765423 2331505.75 4844.0 ENSG00000148943|ENST00000278193|LIN7C;;ENSG00000111052|ENST00000552864|LIN7A 3.497663815816244 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4847 25.747 148.0 403140.0 25 0 38300.0 + 12006 GPPSHLQS 8 98 411.7089898261583 821.4034267191166 2 411.7086974978447 MULTI CID FTMS 0 0 0 4844 189967.15625 1.0 0 0.0 3 Unmodified _GPPSHLQS_ REV__ENSG00000189050|ENST00000305783|RNFT1;REV__ENST00000477207.2_1_17:58039882-58042045:-|nuORF;REV__ENST00000586083.5_1_17:58037427-58042045:-|nuORF;REV__nc|ENSG00000189050|Q5M7Z0-2|RNFT1;REV__nc|ENSG00000189050|Q5M7Z0-3|RNFT1 16.942295170755138 0.6606234159769251 1 [RD]G{M(Oxidation (M))|F}{I|L}QS 7 -1 + 26.532 0.0 0.0 3.2301 3.2301 82.178 0.0 0.0 0.0 6.777807052660805 11.557715027551207 6.777807052660805 19.941163069953305 0 0.5317183090963749 0.0 0.0 0.0 [RD]G{M(Oxidation (M))|F}{I|L}QS;[AG][YR]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 3.2301;0.80238 -;- 59 1 2.265 49152.4 1.0 1572 3273 4844 DOHH2_400M_050219_1,4847 DOHH2_400M_050219_1,4847,GPPSHLQS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4848 25.761 800.0 172690.0 25 0 19121.0 -1 AKTLGIVM 8 166 424.74925820923744 847.4839634852749 2 424.7493469119072 MULTI CID FTMS 0 0 0 4844 92641.25 0.8237283284776897 -1 0.044534683227539 4 Oxidation (M) _AKTLGIVM(Oxidation (M))_ nc|ENSG00000290584|Q9P1P4|TAAR3P 20.453626601364224 0.6087503291685402 1 [{I|L}A]SAK{I|L}V{M(Oxidation (M))|F} 8 -1 + 52.164 0.0 0.0 6.1551 6.1551 79.229 0.0 0.0 0.0 1.249387366082999 16.40978057358332 1.249387366082999 1.249387366082999 0 1.0 0.0 1.4361818737241734 0.0 [{I|L}A]SAK{I|L}V{M(Oxidation (M))|F};{[TV]|[{I|L}S]}AAK{I|L}V{M(Oxidation (M))|F};[{I|L}T]GAK{I|L}V{M(Oxidation (M))|F};[{I|L}T]QK{I|L}V{M(Oxidation (M))|F};[TA]VAK{I|L}V{M(Oxidation (M))|F};{[VA]|[{I|L}G]}TAK{I|L}V{M(Oxidation (M))|F};[KQ][{I|L}T]{I|L}V{M(Oxidation (M))|F};[{I|L}A]S{I|L}[KA]V{M(Oxidation (M))|F};[KA]G[{I|L}T]{I|L}V{M(Oxidation (M))|F};{[TV]|[{I|L}S]}A{I|L}[KA]V{M(Oxidation (M))|F} 6.1551;6.0077;5.6385;5.2992;5.2039;4.8277;4.3688;3.701;3.644;3.5536 -;-;-;-;-;-;-;-;-;- 322 1 2.265 110798.9 0.9700000286102296 1573 3273 4844 DOHH2_400M_050219_1,4848 DOHH2_400M_050219_1,4848,AKTLGIVM False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4849 25.775 800.0 269690.0 25 0 25173.0 23941 LVRAKLPA 8 189 434.2921561729356 866.5697594126713 2 434.2915832400322 MULTI CID FTMS 0 0 0 4844 91444.890625 0.7403463888323497 -1 0.044534683227539 5 Unmodified _LVRAKLPA_ ENSG00000139835|ENST00000375431|GRTP1;nc|ENSG00000139835|Q5TC63-2|GRTP1;nc|ENSG00000139835|Q5TC63-3|GRTP1 16.942295170755138 0.6606234159769251 1 {I|L}PA 3 5 24.922 0.0 0.0 2.8759 0.0 0.0 567.386522361525 0.0 567.386522361525 0.0 6.252733243013651 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}PA 2.8759 + + 151 1 2.265 166317.4 0.9200000166893004 1574 3273 4844 DOHH2_400M_050219_1,4849 DOHH2_400M_050219_1,4849,LVRAKLPA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4850 25.778 168.0 378440.0 25 0 129920.0 -1 0 81 488.2692988904733 487.2620224238733 1 488.2690307497978 MULTI CID FTMS 0 0 0 4844 267733.0625 0.3651115855513376 54 -2.646665573120117 6 1 Y 1 -1 11.259 0.0 0.0 2.3107 0.0 0.0 306.1882442029733 0.0 306.1882442029733 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.3107 - 13 + 1 2.265 59272.1 1.0 1575 3273 4844 DOHH2_400M_050219_1,4850 DOHH2_400M_050219_1,4850, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4852 25.796 800.0 61717.0 25 0 5145.5 -1 ECKECRKCFYQ 11 71 775.829432134126 1549.644311335052 2 775.8293945193291 MULTI CID FTMS 0 0 0 4851 52082.296875 0.1574508682108117 5 -0.2627410888671875 1 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 24.99096001346401 0.505407273373304 1 {M(Oxidation (M))|F}ADQA[HD]{M(Oxidation (M))|F}YQ 10 -1 70.196 0.0 0.0 4.5298 0.0 0.0 309.13822506847833 0.0 309.13822506847833 0.0 59.73828478979911 0.0 0.0 0 0.3252574989159953 0.0 0.0 1.579689690656103 {M(Oxidation (M))|F}ADQA[HD]{M(Oxidation (M))|F}YQ 4.5298 - 950 + 1 2.271 41186.4 0.6100000143051147 1576 3274 4851 DOHH2_400M_050219_1,4852 DOHH2_400M_050219_1,4852,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4853 25.798 125.0 578040.0 25 0 55141.0 + + 42400 APRHGLQSL 9 91 489.7787211774898 977.5428894217796 2 489.7774230837822 MULTI CID FTMS 0 0 0 4851 333022.21875 0.6362819515404746 -1 0.0534019470214843 2 Unmodified _VTEAVIFSL_ nc|ENSG00000204469|P48634-3|PRRC2A;ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-4|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A 39.957323273325 0.0756908302845263 1 {[QS]|[NT]}R{M(Oxidation (M))|F}{I|L}GAS{I|L} 9 -1 + 48.03 0.0 0.0 4.9134 4.9134 75.379 0.0 0.0 0.0 2.243012119929091 23.848973065025163 2.243012119929091 1.706962271689747 0 0.8807196863200843 0.0 0.6861818737241735 0.0 {[QS]|[NT]}R{M(Oxidation (M))|F}{I|L}GAS{I|L};{[QS]|[NT]}R{M(Oxidation (M))|F}{I|L}QS{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[ET]|[MV]}[KA]AS{I|L} 4.9134;4.7387;2.4714 -;-;- 130 1 2.271 61273.8 1.0 1577 3274 4851 DOHH2_400M_050219_1,4853 DOHH2_400M_050219_1,4853,VTEAVIFSL False False APRHGLQSL 25.798398 489.777423083782 2644560.75 4851.0 nc|ENSG00000204469|P48634-3|PRRC2A;;ENSG00000204469|ENST00000376033|PRRC2A;;nc|ENSG00000204469|P48634-4|PRRC2A;;nc|ENSG00000204469|P48634-2|PRRC2A 5.205188115437825 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4854 25.802 187.0 621380.0 25 0 60470.0 + 13391 HLKPISREL 9 89 364.889278662716 1091.646006588348 3 364.8886901736259 MULTI CID FTMS 0 0 0 4851 258592.5 0.1369387865605986 -3 0.1103477478027343 3 Unmodified _HLKPISREL_ ENSG00000160201|ENST00000291552|U2AF1;ENST00000478282.1_1_21:44514579-44514991:-|nuORF;nc|ENSG00000160201|Q01081-2|U2AF1;nc|ENSG00000160201|Q01081-4|U2AF1 16.149105407346934 0.3995459350917656 1 {I|L}HKP{I|L}{I|L} 6 5 50.45 0.0 0.0 4.6215 0.0 0.0 0.0 387.1633394830688 387.1633394830688 40.17281040055961 0.0 0.0 0.0 0 0.7429928190999391 1.6989700043360187 0.0 0.0 {I|L}HKP{I|L}{I|L} 4.6215 - 191 + 1 2.271 99686.2 1.0 1578 3274 4851 DOHH2_400M_050219_1,4854 DOHH2_400M_050219_1,4854,HLKPISREL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4855 25.805 160.0 374740.0 25 0 33539.0 + 33001 SENMKASSF 9 93 500.7236706167136 999.4327883002272 2 500.7233764529228 MULTI CID FTMS 0 0 0 4851 160823.46875 0.6440186777706636 -2 0.0979366302490234 4 Unmodified _SENMKASSF_ ENSG00000109534|ENST00000226796|GAR1;ENST00000503671.2_1_4:110737056-110740318:+|nuORF;ENST00000506840.5_1_4:110736915-110743667:+|nuORF;nc|ENSG00000109534|Q9NY12-2|GAR1 23.78978130925829 0.2284941198415988 1 {[ES]|[DT]|[{I|L}C]}NMG[KT]S{M(Oxidation (M))|F} 9 3 + 33.299 0.0 0.0 3.3318 3.3318 76.231 0.0 0.0 0.0 7.147642715192511 6.989700043360191 6.989700043360191 6.989700043360191 0 1.1237125054200234 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}NMG[KT]S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NMG[KT]AY;{[ES]|[DT]|[{I|L}C]}GGMG[KT]S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGMG[KT]AY;{[ES]|[DT]|[{I|L}C]}N{[QS]|[NT]}[WH]{I|L} 3.3318;2.6324;2.4104;1.711;0.4471 -;-;-;-;- 140 + 1 2.271 52299.0 1.0 1579 3274 4851 DOHH2_400M_050219_1,4855 DOHH2_400M_050219_1,4855,SENMKASSF False True SENMKASSF 25.80514 500.723376452923 1338237.0 4851.0 ENST00000506840.5_1_4:110736915-110743667:+|nuORF;;ENSG00000109534|ENST00000226796|GAR1;;ENST00000503671.2_1_4:110737056-110740318:+|nuORF;;nc|ENSG00000109534|Q9NY12-2|GAR1 6.449014663696289 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4856 25.819 800.0 176250.0 25 0 13225.0 + 39602 VDIINAKQ 8 153 450.76128922198654 899.5080255107731 2 450.7606078982353 MULTI CID FTMS 0 0 0 4851 102193.328125 0.9273228751267908 -1 0.0534019470214843 5 Unmodified _VDIQAQKV_ nc|ENSG00000111669|P60174-4|TPI1;ENSG00000111669|ENST00000396705|TPI1;nc|ENSG00000111669|P60174-3|TPI1;ENST00000335020.2_1_6:116360631-116360655:+|nuORF 19.256988751693697 0.6264283240490721 1 VD{I|L}{I|L}NAKQ 8 4 + 81.167 0.0 0.0 9.0235 9.0235 94.676 0.0 0.0 0.0 31.6385680263867 11.396817769195223 11.396817769195223 9.262137858390815 0 1.4698565171985374 1.5228787452803376 0.0 0.2134679910804404 VD{I|L}{I|L}NAKQ;VD{I|L}{I|L}GGAKQ;VD{I|L}{I|L}[RD]G{I|L};[DV]{I|L}[QA]V[KQ];VDVH[RK]{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}V[QA]V[KQ];{I|L}{I|L}N{[DA]|[EG]}V[KQ];{[QV]|[N{I|L}]|[RA]|[KV]}A{NN|[MP]|[D{I|L}]|[EV]}V[KQ];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[DA]|[EG]}V[KQ];{I|L}{I|L}N[PS]T[KQ] 9.0235;7.9938;5.0827;4.4024;3.506;2.1632;1.1749;1.0212;0.93316;0.9283 -;-;-;-;-;-;-;-;-;- 460 + 1 2.271 110908.2 0.9800000190734864 1580 3274 4851 DOHH2_400M_050219_1,4856 DOHH2_400M_050219_1,4856,VDIQAQKV False False VDIINAKQ 25.818954 450.760607898235 600073.375 4851.0 nc|ENSG00000111669|P60174-4|TPI1;;ENSG00000111669|ENST00000396705|TPI1;;nc|ENSG00000111669|P60174-3|TPI1;;ENST00000335020.2_1_6:116360631-116360655:+|nuORF 3.891594171524048 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4857 25.827 459.0 376910.0 25 0 19945.0 1038 AGEYSRQL 8 148 462.2329975947109 922.451442256222 2 462.2325317263603 MULTI CID FTMS 0 0 0 4851 148710.46875 0.3957640492833935 -2 0.0979366302490234 6 Unmodified _AGEYSRQL_ ENSG00000133020|ENST00000403437|MYH8 36.04419817259434 0.3004715606373109 1 {[QD]|[EN]|[WG]|[KD]|[RS]}QYEQ{I|L} 7 4 + 52.837 0.0 0.0 5.7279 5.7279 88.091 0.0 0.0 0.0 5.982648715253902 36.52613443665216 5.982648715253902 9.33053210369387 0 0.7302046884880937 0.0 0.0 0.9829535345634596 {[QD]|[EN]|[WG]|[KD]|[RS]}QYEQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]YEQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}QYE[AG]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]YE[AG]{I|L};[AG]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}Q{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}Q{I|L};[W{M(Oxidation (M))|F}]K{[DS]|[MA]|[CV]|TT}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[MS]|[{M(Oxidation (M))|F}A]}{[DS]|[MA]|[CV]|TT}Q{I|L};[AG]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}[AG]{I|L};[AG]{I|L}[{M(Oxidation (M))|F}T]{[CA]|SS}Q{I|L} 5.7279;4.7164;4.7164;3.7123;3.5048;2.9682;2.9172;2.6221;2.5007;2.3252 -;-;-;-;-;-;-;-;-;- 346 1 2.271 134395.9 1.0 1581 3274 4851 DOHH2_400M_050219_1,4857 DOHH2_400M_050219_1,4857,AGEYSRQL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4859 25.832 71.0 545000.0 25 0 37043.0 25448 NEHVSQVF 8 73 480.23286064730814 958.4511683614164 2 480.2326537966728 MULTI CID FTMS 0 0 0 4858 591486.875 0.5600725459176173 2 -0.1088161468505859 1 Unmodified _NEHVSQVF_ ENST00000414932.1_1_7:43908445-43909104:-|nuORF 32.30548876998284 0.3644845974844379 1 {[QS]|[NT]}[HV]QDV{M(Oxidation (M))|F} 8 3 {[QS]|[NT]}[HV]Q + + 32.435 -9.0579 -1.5636 3.3841 3.3841 51.38 0.0 0.0 0.0 0.0 16.95046257204389 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {[QS]|[NT]}[HV]QDV{M(Oxidation (M))|F} 3.3841 - 138 + 1 2.271 33266.7 1.0 1582 3275 4858 DOHH2_400M_050219_1,4859 DOHH2_400M_050219_1,4859,NEHVSQVF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4860 25.838 311.0 183890.0 25 0 12707.0 + 7020 EEKYRPAAL 9 91 538.7902670144788 1075.5659810957577 2 538.7900268435478 MULTI CID FTMS 0 0 0 4858 111630.7578125 0.7890248701196652 1 -0.0479011535644531 2 Unmodified _EEKYRPAAL_ ENSG00000115464|ENST00000398571|USP34;ENST00000463046.5_1_2:61439047-61463244:-|nuORF;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34 48.345845343767074 0.0439967357579942 1 EEKYR[PA]A{I|L} 9 0 + 48.61 0.0 0.0 4.5195 4.5195 87.465 0.0 0.0 0.0 29.881062318217104 13.305840530896589 13.305840530896589 39.09469840484917 0 0.7059771852360797 1.5228787452803376 0.0 0.0 + + EEKYR[PA]A{I|L};[PA]A[YE]R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[DP][YR]R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 4.5195;0.88466;0.58767 +;-;- + 128 + 1 2.271 48374.3 1.0 1583 3275 4858 DOHH2_400M_050219_1,4860 DOHH2_400M_050219_1,4860,EEKYRPAAL True True EEKYRPAAL 25.83755 538.790026843548 667733.0625 4858.0 nc|ENSG00000115464|Q70CQ2-3|USP34;;ENSG00000115464|ENST00000398571|USP34;;ENST00000463046.5_1_2:61439047-61463244:-|nuORF;;nc|ENSG00000115464|Q70CQ2-2|USP34 5.508527914683024 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4861 25.84 135.0 456670.0 25 0 23923.0 31443 RPQSNWKESAN 11 102 658.8207538124584 1315.6269546917167 2 658.8203613162041 MULTI CID FTMS 0 0 0 4858 340686.5625 0.6478861571390333 -2 0.1023616790771484 3 Unmodified _RPQSNWKESAN_ ENSG00000197077|ENST00000358431|KIAA1671 18.373094154950223 0.6529654022026722 1 [YT]GGV[HV]PSQS{[QG]|[NA]} 13 10 + 76.91 0.0 0.0 5.8459 5.8459 79.723 0.0 0.0 0.0 2.417175480115759 6.00843075963715 2.417175480115759 2.417175480115759 0 0.9247425010840048 1.154901959985743 2.820134031063924 0.0 [YT]GGV[HV]PSQS{[QG]|[NA]};[YG]TGV[HV]PSQS{[QG]|[NA]};{[SA]|[TG]}YGV[HV]PSQS{[QG]|[NA]};[YT]NV[HV]PSQS{[QG]|[NA]};{[SA]|[TG]}GYV[HV]PSQS{[QG]|[NA]};[YT]GGV[HV]PS[AG]S{[QG]|[NA]};[YT]GR[HV]PSQS{[QG]|[NA]};[YG]TGV[HV]PS[AG]S{[QG]|[NA]};{[DA]|[EG]}KY[HV]PSQS{[QG]|[NA]};[YG]TR[HV]PSQS{[QG]|[NA]} 5.8459;5.6621;5.4259;5.3948;5.2713;5.1563;5.1215;4.9725;4.9609;4.9378 -;-;-;-;-;-;-;-;-;- 5632 1 2.271 52188.0 1.0 1584 3275 4858 DOHH2_400M_050219_1,4861 DOHH2_400M_050219_1,4861,RPQSNWKESAN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4862 25.843 151.0 545060.0 25 0 28759.0 + 5544 DMKRHRIQF 9 116 410.8891044814269 1229.6454840444806 3 411.2233154177666 MULTI CID FTMS 0 0 0 4858 242161.3125 0.3145771747346508 -3 0.1468963623046875 4 Unmodified _DMKRHRIQF_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 16.942295170755138 0.3780752226737986 1 DM{M(Oxidation (M))|F} 3 6 41.427 0.0 0.0 3.369 0.0 0.0 0.0 833.487384952265 833.487384952265 23.46787486224656 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 DM{M(Oxidation (M))|F} 3.369 - 59 + 1 2.271 67360.8 1.0 1585 3275 4858 DOHH2_400M_050219_1,4862 DOHH2_400M_050219_1,4862,DMKRHRIQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4863 25.851 447.0 302890.0 25 0 48383.0 + 5454 DLQTKSAL 8 134 438.2454143513417 874.4762757694833 2 438.2456237673759 MULTI CID FTMS 0 0 0 4858 217099.84375 0.5418620562600354 -2 0.1023616790771484 5 Unmodified _DLQTKSAL_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 46.020951573049366 0.1579632664462935 1 {NN|[MP]|[D{I|L}]|[EV]}QT[KS]A{I|L} 8 0 + 51.208 0.0 0.0 5.8559 5.8559 88.507 0.0 0.0 0.0 35.723506410013215 3.187587626244124 3.187587626244124 9.262137858390815 0 0.7302046884880937 2.0 0.805462187404089 0.4247425010840047 + + {NN|[MP]|[D{I|L}]|[EV]}QT[KS]A{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]T[KS]A{I|L};{NN|[MP]|[D{I|L}]|[EV]}QT[{I|L}A][KS];{NN|[MP]|[D{I|L}]|[EV]}[AG]T[{I|L}A][KS];[KT]{[QS]|[NT]}A{I|L}D{I|L};[KT]{[SA]|[TG]}Q{I|L}D{I|L};{[TV]|[{I|L}S]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{I|L}D{I|L};[KT]{[SA]|[TG]}GA{I|L}D{I|L};[QT][KS]A{I|L}D{I|L};{[SA]|[TG]}A[KS]A{I|L}D{I|L} 5.8559;4.7967;4.1942;3.1351;2.2251;2.0416;1.8338;1.8224;1.7016;1.007 +;-;-;-;-;-;-;-;-;- + 486 + 1 2.271 107060.5 1.0 1586 3275 4858 DOHH2_400M_050219_1,4863 DOHH2_400M_050219_1,4863,DLQTKSAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4864 25.86 492.0 218290.0 25 0 10584.0 + 32778 SEEDQVRKW 9 138 588.7856489838858 1175.5567450345716 2 588.7856323122978 MULTI CID FTMS 0 0 0 4858 87415.5625 0.2600438076472066 -2 0.1023616790771484 6 Unmodified _SEEDQVRKW_ nc|ENSG00000149100|Q7L2H7-2|EIF3M 89.40071534611396 0.0152361884002446 1 {[ES]|[DT]|[{I|L}C]}EDQVRKW 9 0 + 71.839 0.0 0.0 6.1111 6.1111 88.441 0.0 0.0 0.0 7.147642715192504 9.51544993495972 7.147642715192504 9.208187539523747 0 2.004432191740108 0.0 0.4247425010840047 1.0994850021680094 + + {[ES]|[DT]|[{I|L}C]}EDQVRKW;{[ES]|[DT]|[{I|L}C]}EDQV[VG]KW;{[ES]|[DT]|[{I|L}C]}ED[AG]VRKW;{[ES]|[DT]|[{I|L}C]}EDQVRWK;{[ES]|[DT]|[{I|L}C]}ED[AG]V[VG]KW;{[ES]|[DT]|[{I|L}C]}ED[AG]VRWK;{[ES]|[DT]|[{I|L}C]}EDQV[VG]WK;{[ES]|[DT]|[{I|L}C]}ED[AG]V[VG]WK;W[C(Carbamidomethyl (C))N]QVRKW;W[C(Carbamidomethyl (C))N]QV[VG]KW 6.1111;5.3278;5.3278;5.3016;4.5482;4.5183;4.5183;3.7387;3.4696;2.6817 +;-;-;-;-;-;-;-;-;- + 547 + 1 2.271 82805.1 1.0 1587 3275 4858 DOHH2_400M_050219_1,4864 DOHH2_400M_050219_1,4864,SEEDQVRKW True True SEEDQVRKW 25.859931 588.785632312298 3703713.0 4858.0 nc|ENSG00000149100|Q7L2H7-2|EIF3M 6.597263336181641 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4865 25.861 33.0 1520400.0 25 0 151940.0 31327 RMLAEPVK 8 66 472.2749685628317 0 472.2751037478447 PEAK CID FTMS 0 0 0 4858 1885505.125 0.8179590989026125 2 -0.1088161468505859 7 Unmodified _RMLAEPVK_ ENSG00000168769|ENST00000380013|TET2;TET2|p.N1748Tfs*15|1|0.17|ENSG00000168769|chr4:105275751-105275751|A/-|frameshift_variant 2.059750862983233 0.5930426321653702 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.271 45081.3 1.0 1588 3275 4858 DOHH2_400M_050219_1,4865 DOHH2_400M_050219_1,4865,RMLAEPVK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4866 25.875 800.0 110900.0 25 0 20295.0 -1 0 68 1163.791411599251 3488.352405397953 3 1164.125170886517 MULTI CID FTMS 0 0 0 4858 158457.90625 0.7482851056576793 -2 0.1023616790771484 8 1 {M(Oxidation (M))|F}G 2 -1 7.9588 0.0 0.0 0.22815 0.0 0.0 2000.694184940869 1280.5562967566516 3281.2504816975206 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.22815 - 39 + 1 2.271 77455.7 0.4900000095367431 1589 3275 4858 DOHH2_400M_050219_1,4866 DOHH2_400M_050219_1,4866, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4868 25.88 3.8 17730000.0 25 0 1981400.0 + -1 PQMLLKLRK 9 81 381.5741831463996 1141.700720039399 3 381.5743591189384 MULTI CID FTMS 0 0 0 4867 12987434.0 0.9630052114139924 1 -0.0609149932861328 1 Oxidation (M) _PQM(Oxidation (M))LLKLRK_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 4.897010918128616 0.7437319958283661 1 K{I|L}K[QP]E 6 -1 25.406 0.0 0.0 2.2253 0.0 0.0 400.27949721504064 0.0 400.27949721504064 0.0 14.436974992327125 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.2253 - 43 1 2.271 59210.5 1.0 1590 3276 4867 DOHH2_400M_050219_1,4868 DOHH2_400M_050219_1,4868,PQMLLKLRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4869 25.883 135.0 453280.0 25 0 46120.0 -1 VLFVEDGKME 10 91 591.7898033345947 1181.5650537359893 2 591.7900268435478 MULTI CID FTMS 0 0 0 4867 286111.84375 0.9166662411521772 1 -0.0609149932861328 2 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 22.65808497894818 0.4596126414678359 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KGK{I|L}G{[CP]|[EA]}W 10 -1 + 43.377 0.0 0.0 3.6712 3.6712 82.688 0.0 0.0 0.0 29.882287586051103 5.1849178312658495 5.1849178312658495 15.21652514092061 0 1.274227503252014 0.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KGK{I|L}G{[CP]|[EA]}W;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KV[KA]G{[CP]|[EA]}W;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KV[KQ]{[CP]|[EA]}W;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KGK[PA]{[DS]|[MA]|[CV]|TT}[VS];[KP][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{[QV]|[N{I|L}]|[RA]|[KV]}K[{M(Oxidation (M))|F}E] 3.6712;2.3833;1.8305;1.0105;0.6861 -;-;-;-;- 178 + 1 2.271 52970.8 1.0 1591 3276 4867 DOHH2_400M_050219_1,4869 DOHH2_400M_050219_1,4869,VLFVEDGKME False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4870 25.888 326.0 378260.0 25 0 25882.0 + -1 SGMMNVCSQQC 11 120 434.49717540937934 1300.469696828338 3 434.4971801638603 MULTI CID FTMS 0 0 0 4867 277600.0625 0.2749878327693471 -2 0.0968608856201171 3 2 Carbamidomethyl (C) _SGMMNVC(Carbamidomethyl (C))SQQC(Carbamidomethyl (C))_ REV__ENSG00000146197|ENST00000274938|SCUBE3;REV__nc|ENSG00000146197|Q8IX30-2|SCUBE3 2.843284757254958 0.8617331327080043 1 DCTT{I|L}HY 7 -1 29.896 0.0 0.0 2.2989 0.0 0.0 449.1179660433373 0.0 449.1179660433373 0.0 18.63631801610917 0.0 0.0 0 0.0 0.0 0.0 0.0 DCTT{I|L}HY 2.2989 - 173 + 1 2.271 100939.0 1.0 1592 3276 4867 DOHH2_400M_050219_1,4870 DOHH2_400M_050219_1,4870,SGMMNVCSQQC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4871 25.894 332.0 263220.0 25 0 40049.0 + -1 STDVDKTGASYY 12 105 653.7936675472426 1305.5727821612852 2 653.7935668826103 MULTI CID FTMS 0 0 0 4867 234878.234375 0.5757771160398601 -1 0.0479011535644531 4 Oxidation (M) _TSDELQEM(Oxidation (M))QLP_ nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;ENSG00000144895|ENST00000460851|EIF2A 26.268140514670165 0.4754186812857754 1 {[MG]|[TS]}DVD[QT]SKYY 11 -1 + 77.784 0.0 0.0 5.9578 5.9578 89.129 0.0 0.0 0.0 7.367585652254178 9.845099437027995 7.367585652254178 9.845099437027995 0 2.504432191740108 0.0 0.7302046884880937 0.4247425010840047 {[MG]|[TS]}DVD[QT]SKYY;{[MG]|[TS]}DVDKQTSYY;{[MG]|[TS]}DQTDVSKYY;{[MG]|[TS]}DVD[C(Carbamidomethyl (C))R]KYY;{[MG]|[TS]}DVDK[C(Carbamidomethyl (C))R]YY;{[MG]|[TS]}DV[MN]VSKYY;{[MG]|[TS]}DQA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SKYY;{[MG]|[TS]}DVD[QT]DK[NS]P;{[MG]|[TS]}DVD[QT]SK[DN]P;{[MG]|[TS]}QKDVDTSYY 5.9578;5.2037;5.1781;5.1626;4.8807;4.8666;4.861;4.7395;4.7365;4.5723 -;-;-;-;-;-;-;-;-;- 6756 + 1 2.271 68632.0 1.0 1593 3276 4867 DOHH2_400M_050219_1,4871 DOHH2_400M_050219_1,4871,TSDELQEMQLP False False STDVDKTGASYY 25.894454 653.79356688261 2316697.0 4867.0 nc|ENSG00000144895|Q9BY44-2|EIF2A;;nc|ENSG00000144895|Q9BY44-4|EIF2A;;nc|ENSG00000144895|Q9BY44-3|EIF2A;;ENSG00000144895|ENST00000460851|EIF2A 7.954162915547688 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4872 25.908 800.0 207340.0 25 0 17675.0 + -1 WNFNDMSEGEG 11 160 651.242216355079 1300.469879776958 2 651.2426635622978 MULTI CID FTMS 0 0 0 4867 203267.328125 0.2770726861057082 -2 0.0968608856201171 5 Oxidation (M) _WNFNDM(Oxidation (M))SEGEG_ REV__ENSG00000073910|ENST00000542859|FRY;REV__ENST00000602645.1_1_13:32828360-32839754:+|nuORF 13.614867670302877 0.751941774060705 1 EGS[C(Carbamidomethyl (C))M]CTT{I|L}H 10 -1 59.884 0.0 0.0 4.6048 0.0 0.0 0.0 178.05109583072502 178.05109583072502 36.05388478663194 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.9489700043360187 0.0 EGS[C(Carbamidomethyl (C))M]CTT{I|L}H 4.6048 - 668 + 1 2.271 122471.3 0.7900000214576721 1594 3276 4867 DOHH2_400M_050219_1,4872 DOHH2_400M_050219_1,4872,WNFNDMSEGEG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4873 25.916 438.0 194120.0 25 0 19095.0 + 25574 NEYPTPRSY 9 129 563.7616044566378 1125.5086559800754 2 563.7620727419853 MULTI CID FTMS 0 0 0 4867 111262.2109375 0.6492199001988656 -6 0.2420158386230468 6 Unmodified _NEYPTPRSY_ ENSG00000237651|ENST00000432605|C2orf74 43.77239144664712 0.0547478964384323 1 {[QD]|[EN]|[WG]|[KD]|[RS]}YPT 5 4 33.328 0.0 0.0 2.9611 0.0 0.0 0.0 518.236227802416 518.236227802416 25.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + {[QD]|[EN]|[WG]|[KD]|[RS]}YPT 2.9611 + + 87 + 1 2.271 68180.2 1.0 1595 3276 4867 DOHH2_400M_050219_1,4873 DOHH2_400M_050219_1,4873,NEYPTPRSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4874 25.922 327.0 305020.0 25 0 21939.0 + 6180 DTDSQRLAY 9 128 534.7511751302862 1067.4877973273724 2 534.7513915896416 MULTI CID FTMS 0 0 0 4867 109205.828125 0.349865683736459 -8 0.2827682495117187 7 Unmodified _DTDSQRLAY_ ENSG00000101412|ENST00000343380|E2F1 82.5293158979368 0.0169039238599547 1 {[ES]|[DT]|[{I|L}C]}DSQR{I|L}AY 9 0 + 54.522 0.0 0.0 5.1075 5.1075 84.743 0.0 0.0 0.0 43.40263930268896 13.89075625191822 13.89075625191822 9.208187539523747 0 1.837180496500464 0.0 0.3054621874040891 0.3252574989159953 + + {[ES]|[DT]|[{I|L}C]}DSQR{I|L}AY;{[ES]|[DT]|[{I|L}C]}DS[AG]R{I|L}AY;{[ES]|[DT]|[{I|L}C]}[HV]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}AY;{[ES]|[DT]|[{I|L}C]}[RN]{[ES]|[DT]|[{I|L}C]}{I|L}AY;{[ES]|[DT]|[{I|L}C]}[RN]P[MT]AY;{[ES]|[DT]|[{I|L}C]}[W{I|L}]{[WN]|[YH]}AY;[HA]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}C]|[YS]}{I|L}AY;{[ES]|[DT]|[{I|L}C]}[RN]P[R{M(Oxidation (M))|F}]Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}{[ES]|[DT]|[{I|L}C]}{I|L}AY;[{I|L}A][HM]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}AY 5.1075;4.2449;2.5111;2.2834;1.674;1.4473;1.0343;0.95129;0.86094;0.82141 +;-;-;-;-;-;-;-;-;- + 351 + 1 2.271 80714.6 1.0 1596 3276 4867 DOHH2_400M_050219_1,4874 DOHH2_400M_050219_1,4874,DTDSQRLAY True True DTDSQRLAY 25.922029 534.751391589642 2792799.0 4867.0 ENSG00000101412|ENST00000343380|E2F1 7.476707935333252 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4875 25.936 800.0 250530.0 25 0 20108.0 + 32824 SEGDDKIEY 9 172 528.2290970258505 1054.4436411185009 2 528.2297241091728 MULTI CID FTMS 0 0 0 4867 91753.65625 0.3884200407494065 -2 0.0968608856201171 8 Unmodified _SEGDDKIEY_ ENSG00000105202|ENST00000221801|FBL;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 47.594388314883695 0.0456443387682827 1 {[ES]|[DT]|[{I|L}C]}[QA]{[QN]|[E{I|L}]|[KN]}SEY 9 4 + 47.844 0.0 0.0 4.5374 4.5374 71.792 0.0 0.0 0.0 5.121218754807067 5.121218754807067 5.121218754807067 0.0746048506279635 0 0.9247425010840048 0.0 1.8473349592275297 0.0 {[ES]|[DT]|[{I|L}C]}[QA]{[QN]|[E{I|L}]|[KN]}SEY;{[ES]|[DT]|[{I|L}C]}GAA{[QN]|[E{I|L}]|[KN]}SEY;{[ES]|[DT]|[{I|L}C]}GAAE{I|L}SEY;{[QD]|[EN]|[WG]|[KD]|[RS]}[DG]{[QN]|[E{I|L}]|[KN]}SEY;{[ES]|[DT]|[{I|L}C]}GAA{I|L}ESEY;{[ES]|[DT]|[{I|L}C]}[QA][{I|L}T]DEY;{[ES]|[DT]|[{I|L}C]}GD[VG]{I|L}SEY;{[ES]|[DT]|[{I|L}C]}GAA[{I|L}T]DEY;{[ES]|[DT]|[{I|L}C]}[QA]E{I|L}SEY;[QA]ESE{I|L}SEY 4.5374;4.5303;4.0517;3.9672;3.9398;3.8374;3.8363;3.8303;3.6574;3.6483 -;-;-;-;-;-;-;-;-;- 1428 1 2.271 152945.8 0.5199999809265137 1597 3276 4867 DOHH2_400M_050219_1,4875 DOHH2_400M_050219_1,4875,SEGDDKIEY True True SEGDDKIEY 25.93586 528.229724109173 1267099.125 4867.0 ENSG00000105202|ENST00000221801|FBL;;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 5.6043009757995605 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4877 25.95 695.0 244290.0 25 0 22775.0 + 2668 ATDPTIHTV 9 141 477.7482825625647 953.4820121919296 2 477.7487060427666 MULTI CID FTMS 0 0 0 4876 70201.75 0.8336575656184202 1 -0.0749034881591796 1 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 57.47134341890925 0.0274820932774257 1 [PG]D 3 8 13.382 0.0 0.0 1.4035 0.0 0.0 0.0 681.3572007507763 681.3572007507763 -9.316124067911687 0.0 -9.316124067911687 0.0 0 0.0 0.7695510786217261 0.0 0.0 [PG]D 1.4035 - 226 1 2.271 131865.0 1.0 1598 3277 4876 DOHH2_400M_050219_1,4877 DOHH2_400M_050219_1,4877,ATDPTIHTV True True ATDPTIHTV 25.950495 477.748706042767 500299.65625 4876.0 nc|ENSG00000086848|Q9H6U8|ALG9;;ENSG00000086848|ENST00000616540|ALG9;;nc|ENSG00000086848|Q9H6U8-2|ALG9;;nc|ENSG00000086848|Q9H6U8-4|ALG9 5.657863934834798 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4878 25.952 86.0 902590.0 25 0 49184.0 + 26594 NVPWTRTI 8 112 493.7725704280341 985.530587922868 2 493.7725402712822 MULTI CID FTMS 0 0 0 4876 693987.9375 0.0301611824875393 -4 0.2111778259277343 2 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 32.30548876998284 0.3644845974844379 1 {[QN]|[E{I|L}]|[KN]}S[RP]GNT{I|L} 9 -1 + 66.189 0.0 0.0 6.7161 6.7161 80.786 0.0 0.0 0.0 1.2756886621399417 15.606673061697364 1.2756886621399417 1.2756886621399417 0 1.274227503252014 1.5228787452803376 0.0 0.6747425010840047 {[QN]|[E{I|L}]|[KN]}S[RP]GNT{I|L};{[NV]|[RG]}RNVGNT{I|L};{[QN]|[E{I|L}]|[KN]}S[RP]GGGT{I|L};{[NV]|[RG]}RGGVGNT{I|L};{[NV]|[RG]}RNVGGGT{I|L};{[QN]|[E{I|L}]|[KN]}SG[RP]NT{I|L};{[NV]|[RG]}RNGVNT{I|L};{[NV]|[RG]}G{[NV]|[RG]}VGNT{I|L};{[NV]|[RG]}RGGVGGGT{I|L};{[QN]|[E{I|L}]|[KN]}SG[RP]GGT{I|L} 6.7161;6.5866;5.7817;5.6523;5.6523;5.4697;5.3991;5.2789;4.7224;4.5353 -;-;-;-;-;-;-;-;-;- 1077 1 2.271 63195.4 1.0 1599 3277 4876 DOHH2_400M_050219_1,4878 DOHH2_400M_050219_1,4878,NVPWTRTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4879 25.954 95.0 766720.0 25 0 100570.0 + 32621 SAYERSMM 8 87 487.707470553809 973.400388174418 2 487.7072021365166 MULTI CID FTMS 0 0 0 4876 495597.28125 0.6147983891226235 -1 0.0609149932861328 3 Unmodified _SAYERSMM_ ENSG00000159140|ENST00000356577|SON;ENSG00000159140|ENST00000356577|SON;ENSG00000159140|ENST00000356577|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-9|SON 18.1463463914782 0.6428359029697936 1 {[SA]|[TG]}YE 4 4 37.307 0.0 0.0 3.8327 0.0 0.0 0.0 520.2008150690061 520.2008150690061 23.327731244245346 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {[SA]|[TG]}YE 3.8327 + + 71 + 1 2.271 61178.0 1.0 1600 3277 4876 DOHH2_400M_050219_1,4879 DOHH2_400M_050219_1,4879,SAYERSMM False True SAYERSMM 25.954474 487.707202136517 8035804.0 4876.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;SON|p.M1049L|1|0.36|ENSG00000159140|chr21:33552376-33552376|A/C|missense_variant;;nc|ENSG00000159140|P18583-9|SON 2.7919880151748657 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4880 25.958 165.0 551370.0 25 0 68054.0 + 13393 HLKPISREL 9 79 546.829911710993 1091.645270488786 2 546.8298217654228 MULTI CID FTMS 0 0 0 4876 394875.125 1.0 0 0.0 4 Unmodified _HLKPISREL_ ENSG00000160201|ENST00000291552|U2AF1;ENST00000478282.1_1_21:44514579-44514991:-|nuORF;nc|ENSG00000160201|Q01081-2|U2AF1;nc|ENSG00000160201|Q01081-4|U2AF1 31.26834338654808 0.1333407332142048 1 H{I|L}K{I|L}P 5 5 68.686 0.0 0.0 6.2919 0.0 0.0 0.0 500.24640833072505 500.24640833072505 55.92141542771227 0.0 0.0 0.0 0 1.25 1.6989700043360187 0.0 0.4247425010840047 H{I|L}K{I|L}P 6.2919 - 163 + 1 2.271 71528.0 1.0 1601 3277 4876 DOHH2_400M_050219_1,4880 DOHH2_400M_050219_1,4880,HLKPISREL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4881 25.972 800.0 212110.0 25 0 10026.0 + 704 AENRQGTLTEY 11 144 641.3073532271297 1280.6001535210594 2 641.3075439333916 MULTI CID FTMS 0 0 0 4876 199651.09375 0.5977787394299482 -1 0.0609149932861328 5 Unmodified _AENRQGTLTEY_ ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74191697-74197664:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1 77.04852534044906 0.0119778990295177 1 TQGT{I|L}TEY 8 4 65.788 0.0 0.0 5.1372 0.0 0.0 369.17088515449376 0.0 369.17088515449376 0.0 35.56449847214866 0.0 0.0 0 1.2302046884880935 0.0 1.579689690656103 0.0 TQGT{I|L}TEY 5.1372 - 5457 1 2.271 126660.9 0.7699999809265137 1602 3277 4876 DOHH2_400M_050219_1,4881 DOHH2_400M_050219_1,4881,AENRQGTLTEY True True AENRQGTLTEY 25.971562 641.307543933392 1867916.625 4876.0 ENSG00000158517|ENST00000289473|NCF1;;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;;nc|ENSG00000158517|P14598-2|NCF1;;ENST00000398421.6_1_7:74191697-74197664:+|nuORF 7.043939113616943 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4882 25.985 800.0 238420.0 25 0 58894.0 + 5546 DMKRHRIQF 9 89 615.8302760314004 1229.6459991296008 2 615.8304321169853 MULTI CID FTMS 0 0 0 4876 114721.75 0.6597732261824455 -1 0.0609149932861328 6 Unmodified _DMKRHRIQF_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 13.90604991867851 0.4602628045680013 1 DE 2 8 20.969 0.0 0.0 1.7053 0.0 0.0 967.550355443503 0.0 967.550355443503 0.0 8.195439355418689 0.0 0.0 0 0.0 0.0 0.0 0.0 DE 1.7053 - 76 1 2.271 145873.4 0.6000000238418579 1603 3277 4876 DOHH2_400M_050219_1,4882 DOHH2_400M_050219_1,4882,DMKRHRIQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4883 25.999 800.0 154870.0 25 0 17814.0 + 29982 QTALPGNDRY 10 133 567.7816933028535 1133.5488336725068 2 567.7811157107353 MULTI CID FTMS 0 0 0 4876 102431.625 1.0 0 0.0 7 Unmodified _QTALPGNDRY_ ENSG00000155313|ENST00000400183|USP25;nc|ENSG00000155313|Q9UHP3-1|USP25;nc|ENSG00000155313|Q9UHP3|USP25 49.52724829834842 0.0829255630816734 1 [NP]A[HC]TP{I|L}ANP 11 10 + 59.094 0.0 0.0 5.2132 5.2132 75.325 0.0 0.0 0.0 2.632550999222289 7.34608522284941 2.632550999222289 0.9330588873923276 0 1.2553407629038813 1.2218487496163564 0.0 0.8494850021680094 [NP]A[HC]TP{I|L}ANP;[NP]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{I|L}ANP;[QT]A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L}ANP;[QT]A{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}ANP;[QT]A{I|L}Y[YG]RY;[QT]A{I|L}Y[YQ]T{M(Oxidation (M))|F};[NP]E[WP]P{I|L}ANP;[QT]A{I|L}Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ANP;[QT]A{I|L}Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GQP;[QT]A{I|L}Y[WQ]QP 5.2132;5.1309;4.981;4.588;4.5407;4.4955;4.4126;4.3925;4.3109;4.2367 -;-;-;-;-;-;-;-;-;- 833 1 2.271 93087.5 0.5600000023841858 1604 3277 4876 DOHH2_400M_050219_1,4883 DOHH2_400M_050219_1,4883,QTALPGNDRY True True QTALPGNDRY 25.999224 567.781115710735 948936.1875 4876.0 ENSG00000155313|ENST00000400183|USP25;;nc|ENSG00000155313|Q9UHP3-1|USP25;;nc|ENSG00000155313|Q9UHP3|USP25 8.069607734680176 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4884 26.011 665.0 730100.0 25 0 71893.0 + 7842 EIKTKIKEL 9 237 367.90099369125846 1100.6811516739754 3 367.9004394412041 MULTI CID FTMS 0 0 0 4876 173888.015625 0.1548732578062637 -3 0.15777587890625 8 Unmodified _ELKTKIEKL_ nc|ENSG00000120694|Q92598-4|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1 69.33821966488729 0.021354776001734 1 TK{I|L}K{M(Oxidation (M))|F}{I|L} 6 5 66.375 0.0 0.0 6.0304 0.0 0.0 352.2107210810443 0.0 352.2107210810443 0.0 10.291316622479094 0.0 0.0 0 0.3494850021680094 0.0 1.4916440611282626 0.7302046884880937 TK{I|L}K{M(Oxidation (M))|F}{I|L} 6.0304 - 2797 1 2.271 379980.8 1.0 1605 3277 4876 DOHH2_400M_050219_1,4884 DOHH2_400M_050219_1,4884,ELKTKIEKL True True EIKTKIKEL 26.010793 367.900439441204 4893019.5 4876.0 nc|ENSG00000120694|Q92598-4|HSPH1;;nc|ENSG00000120694|Q92598-2|HSPH1;;ENSG00000120694|ENST00000320027|HSPH1;;nc|ENSG00000120694|Q92598-3|HSPH1 5.677333037058513 3.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4886 26.016 73.0 884040.0 25 0 88583.0 + 6380 DWAKLIKRL 9 78 571.857428679777 1141.7003044263538 2 571.8577758669853 MULTI CID FTMS 0 0 0 4885 587448.5625 0.255734365807041 2 -0.0722026824951171 1 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 13.614867670302877 0.4681447649821485 1 K{I|L}KQPE 6 -1 51.266 0.0 0.0 4.4903 0.0 0.0 400.280077049025 0.0 400.280077049025 0.0 44.275917732169376 0.0 0.0 0 1.0387254899964358 0.0 0.0 0.4247425010840047 K{I|L}KQPE 4.4903 - 74 1 2.276 55859.7 1.0 1606 3278 4885 DOHH2_400M_050219_1,4886 DOHH2_400M_050219_1,4886,DWAKLIKRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4887 26.023 368.0 179220.0 25 0 27355.0 + 27602 PLEDMGFIQ 9 88 525.2537457275315 1048.492938521863 2 525.2540161013603 MULTI CID FTMS 0 0 0 4885 94377.0625 0.1675873038633245 4 -0.1955699920654297 2 Unmodified _PLEDMGFIQ_ REV__ENSG00000089639|ENST00000203556|GMIP;REV__nc|ENSG00000089639|Q9P107-2|GMIP 19.256988751693697 0.3154191944385105 1 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q 8 -1 + 43.689 0.0 0.0 4.1669 4.1669 76.614 0.0 0.0 0.0 30.109753980263 9.532796692927263 9.532796692927263 4.771212547196626 0 0.9247425010840048 0.0 0.0 0.3807196863200844 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{[DA]|[EG]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}{[DA]|[EG]}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]Q{I|L};{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]Q{I|L};{[CA]|SS}{[DA]|[EG]}{I|L}[C(Carbamidomethyl (C))R]Q{I|L};{[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R][AG]{I|L};{[CA]|SS}W{I|L}S[NG]W{I|L};{[CA]|SS}W{I|L}S[YV][HA] 4.1669;3.7118;3.2835;2.8285;2.0654;1.6103;1.182;1.182;0.88999;0.88999 -;-;-;-;-;-;-;-;-;- 238 + 1 2.276 56774.9 1.0 1607 3278 4885 DOHH2_400M_050219_1,4887 DOHH2_400M_050219_1,4887,PLEDMGFIQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4888 26.024 59.0 826720.0 25 0 87784.0 + 45456 YTETEPYHNY 10 82 658.7753606497913 1315.5361683663823 2 658.7758056521416 MULTI CID FTMS 0 0 0 4885 642916.3125 0.6501167619617021 -2 0.1358184814453125 3 Unmodified _YTETEPYHNY_ ENSG00000158545|ENST00000301011|ZC3H18;ENST00000568072.1_1_16:88666261-88675531:+|nuORF 67.83816525789305 0.0190062514522628 1 YTETEPYWNN 10 2 + 104.49 0.0 0.0 7.9431 7.9431 88.536 0.0 0.0 0.0 30.0 9.164539485499262 9.164539485499262 5.752574989159953 0 0.7614393726401688 1.6989700043360187 0.9247425010840048 0.5796896906561032 YTETEPYWNN;YTETEPYHYN;YTETEPYWGGN;YTETEPY{[DS]|[MA]|[CV]|TT}[DP];YTETEPY[PS]{[ET]|[MV]};YTETEPT[YT][DP];YTETEPT[YE][PS];YTET[Y{M(Oxidation (M))|F}]N{[HG]|PP}AN;YT[{M(Oxidation (M))|F}T][HA]YWNN;YTETE{[VA]|[{I|L}G]}[YE][DP] 7.9431;7.5058;7.2464;6.0117;5.6277;5.6068;5.1656;5.1356;4.8772;4.8152 -;-;-;-;-;-;-;-;-;- 1462 + 1 2.276 41157.2 1.0 1608 3278 4885 DOHH2_400M_050219_1,4888 DOHH2_400M_050219_1,4888,YTETEPYHNY True True YTETEPYHNY 26.024486 658.775805652142 12649555.0 4885.0 ENSG00000158545|ENST00000301011|ZC3H18;;ENST00000568072.1_1_16:88666261-88675531:+|nuORF 8.804500261942545 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4889 26.027 112.0 650810.0 25 0 59327.0 + 12353 GTDGHVHLY 9 105 499.7379664364471 997.4613799396942 2 499.7377502322197 MULTI CID FTMS 0 0 0 4885 406417.59375 0.1425293243844877 -3 0.1837196350097656 4 Unmodified _GTDGHVHLY_ ENSG00000119333|ENST00000372715|DYNC2I2 89.42679046578446 0.015225546354407 1 GTD{[HG]|PP}VH{I|L}Y 9 0 + 71.462 0.0 0.0 7.1644 7.1644 95.553 0.0 0.0 0.0 54.42879342620816 14.973024840566469 14.973024840566469 28.58181629278469 0 1.7059771852360797 1.5228787452803376 0.0 0.0 + + GTD{[HG]|PP}VH{I|L}Y;G[HK]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{I|L}Y;G[WP][EP]H{I|L}Y;GTD[QP]P{[CA]|SS}[{I|L}P];Y[YQ]{I|L}H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 7.1644;4.2989;3.6468;2.6939;0.26482 +;-;-;-;- + 373 + 1 2.276 59517.3 1.0 1609 3278 4885 DOHH2_400M_050219_1,4889 DOHH2_400M_050219_1,4889,GTDGHVHLY True True GTDGHVHLY 26.02683 499.73775023222 27662504.0 4885.0 ENSG00000119333|ENST00000372715|DYNC2I2 9.615145047505695 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4890 26.03 138.0 441150.0 25 0 21678.0 + 32779 SEEDQVRKW 9 96 392.8594470676477 1175.5565118031432 3 392.8593627810478 MULTI CID FTMS 0 0 0 4885 317178.0 0.7940017046123493 1 -0.0300617218017578 5 Unmodified _SEEDQVRKW_ nc|ENSG00000149100|Q7L2H7-2|EIF3M 56.17704186161178 0.0281986971544335 1 SEEDQV[RK]W 9 0 + 79.307 0.0 0.0 6.7463 6.7463 90.245 0.0 0.0 0.0 58.86168767277148 5.686362358410122 5.686362358410122 9.208187539523747 0 0.3494850021680094 2.0 1.0 0.5 + + SEEDQV[RK]W;SEED[AG]V[RK]W;{[CT]|[{M(Oxidation (M))|F}G]}[RK]VQD[HC]S;[RK][R{M(Oxidation (M))|F}]QD[HC]S;[RK]V[WE]G{[DA]|[EG]}ES 6.7463;5.963;2.6108;2.3112;1.853 +;-;-;-;- + 145 + 1 2.276 53350.9 1.0 1610 3278 4885 DOHH2_400M_050219_1,4890 DOHH2_400M_050219_1,4890,SEEDQVRKW True True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4891 26.034 228.0 328710.0 25 0 28094.0 + 856 AEVAEHVQY 9 116 523.2506601207022 1044.4867673082042 2 523.2509643435478 MULTI CID FTMS 0 0 0 4885 228175.125 0.453784467535964 -3 0.1837196350097656 6 Unmodified _AEVAEHVQY_ ENSG00000112312|ENST00000230056|GMNN 47.74868867922204 0.0453060283459952 1 {[CP]|[EA]}HVVQ 6 5 40.01 0.0 0.0 3.8306 0.0 0.0 0.0 378.1296956248829 378.1296956248829 15.08401168458093 0.0 0.0 0.0 0 1.1861818737241734 0.0 0.2742275032520141 0.0 {[CP]|[EA]}HVVQ 3.8306 - 1229 1 2.276 63672.9 1.0 1611 3278 4885 DOHH2_400M_050219_1,4891 DOHH2_400M_050219_1,4891,AEVAEHVQY True True AEVAEHVQY 26.033903 523.250964343548 2226715.25 4885.0 ENSG00000112312|ENST00000230056|GMNN 5.3998987674713135 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4892 26.041 391.0 280140.0 25 0 32280.0 36560 TALGPVQIR 9 101 477.7906383451619 953.5667237571238 2 477.7903930544853 MULTI CID FTMS 0 0 0 4885 173527.1875 1.0 0 0.0 7 Unmodified _TALGPVQIR_ ENSG00000248713|ENST00000511828|C4orf54 11.640296217721598 0.521594087909532 1 AA{I|L}W 4 7 20.266 0.0 0.0 2.1253 0.0 0.0 494.3332386701188 0.0 494.3332386701188 0.0 0.3444064470390593 0.0 0.0 0 0.0 0.0 0.0 0.0 AA{I|L}W 2.1253 - 86 1 2.276 90904.9 1.0 1612 3278 4885 DOHH2_400M_050219_1,4892 DOHH2_400M_050219_1,4892,TALGPVQIR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4894 26.048 228.0 304070.0 25 0 27376.0 -1 LPFCRKNV 8 96 517.2852793069982 1032.5560056807965 2 517.2858764529228 MULTI CID FTMS 0 0 0 4893 109772.78125 0.0525179744038174 45 -2.210073471069336 1 Carbamidomethyl (C) _LPFC(Carbamidomethyl (C))RKNV_ ENSG00000136839|ENST00000259362|OR13C9 6.354104778181461 0.7857632046190106 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RC 4 -1 18.5 0.0 0.0 1.7917 0.0 0.0 0.0 513.2798048818264 513.2798048818264 6.906140654642812 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RC 1.7917 - 39 + 1 2.276 60931.6 1.0 1613 3279 4893 DOHH2_400M_050219_1,4894 DOHH2_400M_050219_1,4894,LPFCRKNV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4895 26.062 800.0 58891.0 25 0 9195.0 -1 0 62 1100.4636449169582 0 1100.462939441204 PEAK CID FTMS 0 0 0 4893 61079.03515625 0.5317024385042042 -2 0.1049652099609375 2 1 N 1 -1 5.4846 0.0 0.0 0.24942 0.0 0.0 1510.8597716680977 570.9951876275999 2081.8549592956974 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.24942 - 2 + 1 2.276 40149.7 0.3799999952316284 1614 3279 4893 DOHH2_400M_050219_1,4895 DOHH2_400M_050219_1,4895, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4896 26.065 193.0 278130.0 25 0 25393.0 + 835 AETGNLPHSY 10 88 544.753996454179 1087.4934399751578 2 544.7533447146416 MULTI CID FTMS 0 0 0 4893 248439.296875 0.981830766451073 -1 0.0300617218017578 3 Unmodified _AETGNLPHSY_ ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37 57.72198328787511 0.0425618229276495 1 {[CP]|[EA]}TGN{I|L}PHSY 10 0 + 66.52 0.0 0.0 6.1168 6.1168 91.554 0.0 0.0 0.0 41.340029440689605 12.306634937682157 12.306634937682157 17.219161359540145 0 0.4247425010840047 0.0 0.805462187404089 0.805462187404089 + + {[CP]|[EA]}TGN{I|L}PHSY;{[CP]|[EA]}TGGG{I|L}PHSY;{[CP]|[EA]}TG[VS]K{M(Oxidation (M))|F}SY;{[CP]|[EA]}T{[QD]|[EN]|[WG]|[KD]|[RS]}K{M(Oxidation (M))|F}SY;{[CP]|[EA]}TGN{[ET]|[MV]}{[NV]|[RG]}[PG];{[CP]|[EA]}TGN{[ET]|[MV]}AAA[PG];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HM]{I|L}NG[WP];{NN|[MP]|[D{I|L}]|[EV]}HH{I|L}NG[WP];{[MG]|[TS]}[WQ]{I|L}NG[WP];{[CP]|[EA]}TGN{[ET]|[MV]}AA[QP] 6.1168;4.5334;3.2865;3.1246;2.9278;2.6162;2.4292;2.4135;2.0632;2.0082 +;-;-;-;-;-;-;-;-;- + 326 + 1 2.276 45795.6 1.0 1615 3279 4893 DOHH2_400M_050219_1,4896 DOHH2_400M_050219_1,4896,AETGNLPHSY True True AETGNLPHSY 26.065267 544.753344714642 1322517.25 4893.0 nc|ENSG00000135913|Q86T82-2|USP37;;ENSG00000135913|ENST00000258399|USP37 8.493821938832602 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4897 26.073 436.0 254360.0 25 0 16807.0 + 24706 MNYAMKMCRPV 11 111 672.3099480469576 1342.6053431607152 2 672.3091918826103 MULTI CID FTMS 0 0 0 4893 121925.5546875 0.2551543347755347 -2 0.1049652099609375 4 Unmodified _MNYAMKMCRPV_ REV__ENSG00000164930|ENST00000358755|FZD6 18.1463463914782 0.6576820063886638 1 [MN]PN{I|L}NADQ 9 -1 82.457 0.0 0.0 6.1416 0.0 0.0 0.0 342.15390955142817 342.15390955142817 37.16522195442692 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 1.7302046884880935 [MN]PN{I|L}NADQ 6.1416 - 1414 + 1 2.276 85997.1 1.0 1616 3279 4893 DOHH2_400M_050219_1,4897 DOHH2_400M_050219_1,4897,MNYAMKMCRPV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4898 26.078 246.0 523960.0 25 0 54981.0 + 30528 RELEKDMHYY 10 108 461.8835442874857 1382.6288034626573 3 461.8835327029228 MULTI CID FTMS 0 0 0 4893 111078.96875 0.1597956339731793 -2 0.1049652099609375 5 Unmodified _RELEKDMHYY_ ENSG00000083750|ENST00000374941|RRAGB;ENSG00000155876|ENST00000380527|RRAGA;ENST00000474757.1_1_X:55757854-55777647:+|nuORF;ENST00000498762.1_1_X:55748624-55758085:+|nuORF;nc|ENSG00000083750|Q5VZM2|RRAGB 38.16057220495361 0.1769910087603572 1 {[QN]|[E{I|L}]|[KN]}REKDHMYY 10 4 + 75.187 0.0 0.0 5.438 5.438 77.738 0.0 0.0 0.0 3.187587626244124 15.026975159433531 3.187587626244124 2.0289375146764854 0 1.610924374808178 0.7958800173440752 0.3252574989159953 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}REKDHMYY;{[QN]|[E{I|L}]|[KN]}REKDMHYY;{[RE]|[WV]}{I|L}EKDHMYY;{[RE]|[WV]}{I|L}EKDMHYY;{[QN]|[E{I|L}]|[KN]}RWWHMYY;{[QN]|[E{I|L}]|[KN]}RWWMHYY;{[RE]|[WV]}{I|L}WWHMYY;{[RE]|[WV]}{I|L}WWMHYY;{[QN]|[E{I|L}]|[KN]}[NS][{I|L}V]DHMYY;{[QN]|[E{I|L}]|[KN]}[NS][{I|L}V]DMHYY 5.438;5.2913;5.2075;5.0607;3.5467;3.4;3.3162;3.1694;2.718;2.5713 -;-;-;+;-;-;-;-;-;- + 589 1 2.276 104016.2 1.0 1617 3279 4893 DOHH2_400M_050219_1,4898 DOHH2_400M_050219_1,4898,RELEKDMHYY False True RELEKDMHYY 26.077613 461.883532702923 7670047.3125 4893.0 ENST00000498762.1_1_X:55748624-55758085:+|nuORF;;ENSG00000155876|ENST00000380527|RRAGA;;nc|ENSG00000083750|Q5VZM2|RRAGB;;ENSG00000083750|ENST00000374941|RRAGB;;ENST00000474757.1_1_X:55757854-55777647:+|nuORF 6.791565895080566 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4899 26.083 303.0 452060.0 25 0 24407.0 + 11427 GGVAWVWRSL 10 140 377.5408210509116 1129.6006337529348 3 377.5405456423759 MULTI CID FTMS 0 0 0 4893 91201.125 0.173429629644596 -2 0.1049652099609375 6 Unmodified _GGVAWVWRSL_ REV__ENST00000585468.1_2_19:14070474-14070588:+|nuORF 32.30548876998284 0.2428506522065767 1 {I|L}D[YV]R[HQ]S{I|L} 9 -1 + 58.826 0.0 0.0 5.2077 5.2077 87.621 0.0 0.0 0.0 41.06295344151013 7.614393726401687 7.614393726401687 14.185756335471416 0 0.8494850021680094 1.2218487496163564 1.4802046884880935 0.0 {I|L}D[YV]R[HQ]S{I|L};{I|L}D[YV]R[HQ]{I|L}S;{I|L}D[YV]VY[{M(Oxidation (M))|F}V]{I|L};{[TV]|[{I|L}S]}[WP]GKKDS{I|L};{[TV]|[{I|L}S]}[WP]GKKSD{I|L};[{M(Oxidation (M))|F}V]SKKY[{M(Oxidation (M))|F}V]{I|L};[{M(Oxidation (M))|F}V]SKKG[HQ]S{I|L};[{M(Oxidation (M))|F}V]S[KQ]G[HQ]S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}DKKG[HQ]S{I|L};[{M(Oxidation (M))|F}V][WK]A[HT]E{I|L} 5.2077;3.9519;3.8973;3.6858;3.5097;3.5056;3.1811;3.1811;2.5386;2.3539 -;-;-;-;-;-;-;-;-;- 642 + 1 2.276 109782.6 1.0 1618 3279 4893 DOHH2_400M_050219_1,4899 DOHH2_400M_050219_1,4899,GGVAWVWRSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4901 26.088 69.0 973000.0 25 0 95528.0 + 13392 HLKPISREL 9 72 364.889278662716 1091.646006588348 3 364.8890258669853 MULTI CID FTMS 0 0 0 4900 739442.5625 0.3915750350068531 3 -0.165597915649414 1 Unmodified _HLKPISREL_ ENSG00000160201|ENST00000291552|U2AF1;ENST00000478282.1_1_21:44514579-44514991:-|nuORF;nc|ENSG00000160201|Q01081-2|U2AF1;nc|ENSG00000160201|Q01081-4|U2AF1 34.40172386719151 0.1061884637610825 1 {I|L}HKP{I|L}S 6 5 54.258 0.0 0.0 4.9703 0.0 0.0 0.0 413.2167452447876 413.2167452447876 44.16895006820745 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.3494850021680094 0.0 {I|L}HKP{I|L}S 4.9703 - 137 + 1 2.276 60498.0 1.0 1619 3280 4900 DOHH2_400M_050219_1,4901 DOHH2_400M_050219_1,4901,HLKPISREL True True HLKPISREL 26.087788 364.889025866985 24009270.25 4900.0 ENSG00000160201|ENST00000291552|U2AF1;;nc|ENSG00000160201|Q01081-2|U2AF1;;ENST00000478282.1_1_21:44514579-44514991:-|nuORF;;nc|ENSG00000160201|Q01081-4|U2AF1 2.6058082232872644 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4902 26.094 321.0 283110.0 25 0 26040.0 -1 0 107 504.2642527318633 503.2569762652633 1 504.2648803591728 MULTI CID FTMS 0 0 0 4900 139362.34375 0.4419015621449789 5 -0.2387657165527343 2 1 Y 1 -1 15.485 0.0 0.0 3.0769 0.0 0.0 322.18264872795703 0.0 322.18264872795703 0.0 1.0475750727131563 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.0769 - 32 + 1 2.276 73931.8 1.0 1620 3280 4900 DOHH2_400M_050219_1,4902 DOHH2_400M_050219_1,4902, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4903 26.101 441.0 379170.0 25 0 32175.0 + 25554 NEVDGEYRY 9 139 572.7488572386528 1143.4831615441055 2 572.7490112185478 MULTI CID FTMS 0 0 0 4900 242764.84375 0.7598304883490328 -1 0.0421409606933593 3 Unmodified _NEVDGEYRY_ ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071|PRDM15 76.82478488871298 0.0184607444814265 1 NEVDGEYRY 9 0 + 85.805 0.0 0.0 7.5038 7.5038 95.009 0.0 0.0 0.0 72.61693245690971 13.728721920568248 13.728721920568248 17.46661994673893 0 1.0 1.6989700043360187 0.9916440611282626 0.3807196863200844 + + NEVDGEYRY;NEVDGE[TP]{[{M(Oxidation (M))|F}H]|[RQ]};NEVDG[YR]EY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}YEN;[AG]D{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}YEN;GG{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}[RN]{[{M(Oxidation (M))|F}H]|[RQ]};GG{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}[RH]{M(Oxidation (M))|F}N;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}D[YQ];{[DA]|[EG]}G{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}YEN;[AG]D{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}D[YQ] 7.5038;5.9763;5.6007;0.97039;0.85268;0.50807;0.42033;0.27438;0.20472;0.15666 +;-;-;-;-;-;-;-;-;- + 561 + 1 2.276 130584.3 1.0 1621 3280 4900 DOHH2_400M_050219_1,4903 DOHH2_400M_050219_1,4903,NEVDGEYRY True True NEVDGEYRY 26.101467 572.749011218548 1639568.875 4900.0 nc|ENSG00000141956|P57071-3|PRDM15;;nc|ENSG00000141956|P57071-6|PRDM15;;nc|ENSG00000141956|P57071-2|PRDM15;;ENSG00000141956|ENST00000398548|PRDM15;;nc|ENSG00000141956|P57071|PRDM15;;nc|ENSG00000141956|P57071-5|PRDM15 8.313656171162924 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4904 26.108 352.0 266680.0 25 0 17734.0 + 42300 VSSTSEIGTRY 11 102 600.2988122729265 1198.583071612653 2 600.2989379763603 MULTI CID FTMS 0 0 0 4900 242413.15625 0.910171121845174 -1 0.0421409606933593 4 Unmodified _VSSTSEIGTRY_ ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106 55.24861242081279 0.0885632729458983 1 VSSTSE{I|L}GTRY 11 0 + 110.47 0.0 0.0 9.2168 9.2168 97.274 0.0 0.0 0.0 85.29306170224147 12.060323256818208 12.060323256818208 19.305785912415303 0 0.4247425010840047 2.0 0.805462187404089 0.6747425010840047 + + VSSTSE{I|L}GTRY;VSSTSE{I|L}[WK]Y;VSSTSE{[SA]|[TG]}{I|L}RY;VSS[WM]{I|L}GTRY;VSST[KP]{[{M(Oxidation (M))|F}D]|MM}RY;VSST{[QD]|[EN]|[WG]|[KD]|[RS]}M{I|L}RY;VS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[W{I|L}]TRY;VSS[WM]{I|L}[WK]Y;VSS[WM]{[SA]|[TG]}{I|L}RY;W{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L}GTRY 9.2168;7.6061;7.3585;7.0633;6.0001;5.9958;5.4765;5.4562;5.2051;4.7869 +;-;-;-;-;-;-;-;-;- + 611 + 1 2.276 70191.8 1.0 1622 3280 4900 DOHH2_400M_050219_1,4904 DOHH2_400M_050219_1,4904,VSSTSEIGTRY True True VSSTSEIGTRY 26.10784 600.29893797636 1398231.0 4900.0 nc|ENSG00000103994|Q9H2Y7|ZNF106;;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;;ENSG00000103994|ENST00000564754|ZNF106 7.515324433644612 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4905 26.122 800.0 264610.0 25 0 22155.0 + 17391 KMKEIAEAY 9 189 541.7809490896021 1081.5473452460042 2 541.7815429568291 MULTI CID FTMS 0 0 0 4900 133412.3125 0.151448278523893 -2 0.0722026824951171 5 Unmodified _KMKEIAEAY_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 90.13494162714682 0.0149365284241176 1 MKE{I|L}AEAY 8 1 78.674 0.0 0.0 7.2742 0.0 0.0 128.09541518379064 0.0 128.09541518379064 0.0 61.0948439190658 0.0 0.0 0 2.3169015600442577 0.0 1.5431576817365436 0.3054621874040891 + MKE{I|L}AEAY 7.2742 + + 4867 1 2.276 159554.1 0.6299999952316284 1623 3280 4900 DOHH2_400M_050219_1,4905 DOHH2_400M_050219_1,4905,KMKEIAEAY True True KMKEIAEAY 26.121671 541.781542956829 7762232.0 4900.0 ENSG00000109971|ENST00000534624|HSPA8;;ENSG00000126803|ENST00000247207|HSPA2;;nc|ENSG00000109971|P11142-2|HSPA8;;ENSG00000204388|ENST00000375650|HSPA1B;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENSG00000204389|ENST00000375651|HSPA1A;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 5.999233722686768 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4906 26.13 455.0 202630.0 25 0 13765.0 + 31596 RQSGREPSSKS 11 98 609.814284173283 1217.614015413366 2 609.8144409060478 MULTI CID FTMS 0 0 0 4900 132261.1875 0.5743883288518458 -1 0.0421409606933593 6 Unmodified _RQSGREPSSKS_ REV__nc|ENSG00000138468|Q9BQF6-4|SENP7 16.274544907608252 0.6966175468278786 1 [VG]Q[WK]DPSQS 10 -1 65.232 0.0 0.0 5.3573 0.0 0.0 0.0 102.05592111417324 102.05592111417324 51.736928457494855 0.0 0.0 0.0 0 0.8807196863200843 1.0969100130080565 1.610924374808178 0.9247425010840048 [VG]Q[WK]DPSQS 5.3573 - 293 1 2.276 70510.9 1.0 1624 3280 4900 DOHH2_400M_050219_1,4906 DOHH2_400M_050219_1,4906,RQSGREPSSKS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4907 26.135 266.0 332900.0 25 0 47535.0 + 43785 YENEVALR 8 107 497.2544664628439 992.4943799924878 2 497.2553283572197 MULTI CID FTMS 0 0 0 4900 122426.4609375 0.4097541525341207 -2 0.0722026824951171 7 Unmodified _YENEVALR_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 62.57269311338072 0.1158273023829763 1 YENEVA{I|L}R 8 0 + 99.423 0.0 0.0 10.017 10.017 95.128 0.0 0.0 0.0 82.70094414149064 22.078796174025896 22.078796174025896 9.262137858390815 0 0.7742275032520141 2.0 0.3807196863200844 1.6549471895720984 + + YENEVA{I|L}R;YEGGEVA{I|L}R;YEN[W{I|L}]{I|L}R;YEGG[W{I|L}]{I|L}R;[NS][Q{I|L}][Q{I|L}]QY;{[QD]|[EN]|[WG]|[KD]|[RS]}[KA][Q{I|L}]QY 10.017;9.0842;7.7369;6.7968;0.66835;0.50209 +;-;-;-;-;- + 172 + 1 2.276 71414.9 1.0 1625 3280 4900 DOHH2_400M_050219_1,4907 DOHH2_400M_050219_1,4907,YENEVALR True True YENEVALR 26.134661 497.25532835722 1502888.25 4900.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 6.858043352762858 2.0 True 8.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 4909 26.139 55.0 1023100.0 25 0 106840.0 -1 LCVQKLRIL 9 80 381.5741831463996 1141.700720039399 3 381.5740539431572 MULTI CID FTMS 0 0 0 4908 684855.3125 0.0507813348658448 6 -0.2579555511474609 1 Carbamidomethyl (C) _LC(Carbamidomethyl (C))VQKLRIL_ ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1 2.282774691075616 0.8349936567342158 1 K{I|L}K[QP]E 6 -1 24.922 0.0 0.0 2.1828 0.0 0.0 400.2810230939469 0.0 400.2810230939469 0.0 13.812281309285623 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.1828 - 41 1 2.276 49976.4 1.0 1626 3281 4908 DOHH2_400M_050219_1,4909 DOHH2_400M_050219_1,4909,LCVQKLRIL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4910 26.143 172.0 347760.0 25 0 45709.0 3549 CYCTGWGDPHY 11 83 434.49717540937934 1300.469696828338 3 434.4973937869072 MULTI CID FTMS 0 0 0 4908 282904.3125 0.2802421695257259 3 -0.1602592468261718 2 Unmodified _CYCTGWGDPHY_ nc|ENSG00000198788|Q02817|MUC2 1.4551175022131473 0.8682825962816412 1 TT{I|L}HY 5 8 23.487 0.0 0.0 1.8061 0.0 0.0 667.1580035683756 0.0 667.1580035683756 0.0 13.487219860018556 0.0 0.0 0 0.0 0.0 0.0 0.0 TT{I|L}HY 1.8061 - 44 + 1 2.276 55833.5 1.0 1627 3281 4908 DOHH2_400M_050219_1,4910 DOHH2_400M_050219_1,4910,CYCTGWGDPHY False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4911 26.145 98.0 691220.0 25 0 23174.0 + 6788 EEALHASHGF 10 113 549.253504242657 1096.4924555521138 2 549.2531616091728 MULTI CID FTMS 0 0 0 4908 435113.1875 0.716594144107886 -1 0.0514163970947265 3 Unmodified _EEALHASHGF_ ENSG00000186010|ENST00000507754|NDUFA13;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13 103.74828524460852 0.0066474208684803 1 EEA{I|L}HASHG{M(Oxidation (M))|F} 10 0 + 78.638 0.0 0.0 7.1718 7.1718 95.429 0.0 0.0 0.0 55.00508444608478 13.037275116073346 13.037275116073346 26.787887749990347 0 1.6549471895720984 1.6989700043360187 0.3494850021680094 0.0 + + EEA{I|L}HASHG{M(Oxidation (M))|F};EEA{I|L}HA[HQ]Y;EEA{I|L}HA[DC][{I|L}P];EEA{I|L}H{[C(Carbamidomethyl (C))E]|[WC]}[{I|L}P];EEA{I|L}H{[WT]|[RM]}[DP];{[ET]|[MV]}{[WT]|[RM]}H[YN]{M(Oxidation (M))|F};[HA][HT]AH{I|L}A[HC];{[ES]|[DT]|[{I|L}C]}{[ET]|[MV]}AH{I|L}A[HC];{[HG]|PP}[WH]H[YN]{M(Oxidation (M))|F};[NP]PE[QA]HTG{M(Oxidation (M))|F} 7.1718;4.7287;4.0053;3.4975;2.8356;2.4973;2.3226;2.2231;0.77034;0.69459 +;-;-;-;-;-;-;-;-;- + 624 + 1 2.276 58328.8 1.0 1628 3281 4908 DOHH2_400M_050219_1,4911 DOHH2_400M_050219_1,4911,EEALHASHGF True True EEALHASHGF 26.144681 549.253161609173 4383521.875 4908.0 ENST00000586674.1_1_19:19627047-19643527:+|nuORF;;nc|ENSG00000186010|Q9P0J0-2|NDUFA13;;ENSG00000186010|ENST00000507754|NDUFA13 8.468929767608643 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4912 26.148 168.0 351670.0 25 0 16399.0 + 5545 DMKRHRIQF 9 94 410.8891044814269 1229.6454840444806 3 410.8887817263603 MULTI CID FTMS 0 0 0 4908 307385.625 0.3409503548242946 3 -0.1602592468261718 4 Unmodified _DMKRHRIQF_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 30.63653989081413 0.1413794767160703 1 DMKRH 5 4 51.058 0.0 0.0 4.1522 0.0 0.0 0.0 559.2952364557249 559.2952364557249 28.098943791441968 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + DMKRH 4.1522 + + 34 + 1 2.276 55770.7 1.0 1629 3281 4908 DOHH2_400M_050219_1,4912 DOHH2_400M_050219_1,4912,DMKRHRIQF False True DMKRHRIQF 26.147967 410.88878172636 6004664.0 4908.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 5.249658266703288 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4913 26.151 170.0 454920.0 25 0 25493.0 + 32706 SEAGPNQTF 9 116 475.7144049856267 949.4142570380534 2 475.7143432497978 MULTI CID FTMS 0 0 0 4908 293866.09375 0.348279394316222 -2 0.0935573577880859 5 Unmodified _SEAGPNQTF_ ENSG00000163565|ENST00000295809|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16 28.486842064014134 0.1687311288560894 1 {[ES]|[DT]|[{I|L}C]}A[RH]CT{M(Oxidation (M))|F} 8 4 {[ES]|[DT]|[{I|L}C]}A[RH]C + + 23.856 9.2699 1.3567 2.5127 2.5127 49.543 0.0 0.0 0.0 0.0 6.9451299293173285 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 {[ES]|[DT]|[{I|L}C]}A[RH]CT{M(Oxidation (M))|F} 2.5127 - 345 + 1 2.276 65699.5 1.0 1630 3281 4908 DOHH2_400M_050219_1,4913 DOHH2_400M_050219_1,4913,SEAGPNQTF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4914 26.159 432.0 231560.0 25 0 17971.0 + 30530 RELEKDMHYY 10 101 692.3228673299179 1382.6311817266358 2 692.3245727419853 MULTI CID FTMS 0 0 0 4908 107881.0859375 0.8349275955211999 -1 0.0514163970947265 6 Unmodified _RELEKDMHYY_ ENSG00000083750|ENST00000374941|RRAGB;ENSG00000155876|ENST00000380527|RRAGA;ENST00000474757.1_1_X:55757854-55777647:+|nuORF;ENST00000498762.1_1_X:55748624-55758085:+|nuORF;nc|ENSG00000083750|Q5VZM2|RRAGB 27.128809495255545 0.3591624933674284 1 KDMHYY 6 4 59.315 0.0 0.0 4.29 0.0 0.0 527.2729969709 0.0 527.2729969709 0.0 42.12343876753387 0.0 0.0 0 1.805462187404089 0.0 0.7059771852360797 0.0 + KDMHYY 4.29 + + 103 1 2.276 73816.6 1.0 1631 3281 4908 DOHH2_400M_050219_1,4914 DOHH2_400M_050219_1,4914,RELEKDMHYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4915 26.17 633.0 201750.0 25 0 10436.0 + 25908 NLKSRNVEI 9 153 536.8084972311281 1071.602441529056 2 536.8091918826103 MULTI CID FTMS 0 0 0 4908 104006.890625 0.7872260458053365 -1 0.0514163970947265 7 Unmodified _NLKSRNVEI_ ENSG00000115946|ENST00000263657|PNO1 31.26834338654808 0.1333407332142048 1 {I|L}NKS 4 7 59.751 0.0 0.0 5.5758 0.0 0.0 0.0 626.3267296338901 626.3267296338901 41.52372200412145 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.805462187404089 0.3252574989159953 {I|L}NKS 5.5758 - 405 + 1 2.276 103784.3 1.0 1632 3281 4908 DOHH2_400M_050219_1,4915 DOHH2_400M_050219_1,4915,NLKSRNVEI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4916 26.184 800.0 146840.0 25 0 10912.0 26048 NMPKFDSLWDY 11 117 708.321077410115 1414.62760188703 2 708.3207885622978 MULTI CID FTMS 0 0 0 4908 100834.8515625 0.5715196813093649 -1 0.0514163970947265 8 Unmodified _NMPKFDSLWDY_ ENSG00000197928|ENST00000598513|ZNF677 23.78978130925829 0.5336113198261219 1 NMPN{I|L}NEEGAM[VP] 13 10 + 108.49 0.0 0.0 7.6689 7.6689 81.996 0.0 0.0 0.0 21.61109647366959 0.9590624992886064 0.9590624992886064 0.621479067488437 0 1.055462187404089 1.6989700043360187 0.2887254899964357 1.610924374808178 NMPN{I|L}NEEGAM[VP];NMPN{I|L}NEEQM[VP];NMPN{I|L}NEEGR{[QN]|[E{I|L}]|[KN]};NMPN{I|L}NEEGAR[NG];NMPN{I|L}NEEQR[NG];NMPN{I|L}NEEGRA[NG];NMPN{I|L}NEEGGV{[QN]|[E{I|L}]|[KN]};NMPGG{I|L}NEEGAM[VP];NMPGG{I|L}NEEQM[VP];NMPN{I|L}GGEEQM[VP] 7.6689;7.6249;7.6011;7.5656;7.5216;7.2604;7.1518;7.0275;6.9818;6.9818 -;-;-;-;-;-;-;-;-;- 2789 + 1 2.276 87214.2 0.6000000238418579 1633 3281 4908 DOHH2_400M_050219_1,4916 DOHH2_400M_050219_1,4916,NMPKFDSLWDY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4917 26.19 345.0 353090.0 25 0 33000.0 + 44255 YLKNREVRL 9 129 397.5717312285301 1189.6933642857905 3 397.5715820193291 MULTI CID FTMS 0 0 0 4908 97325.796875 0.867990398784868 -2 0.0935573577880859 9 Unmodified _YLKNREVRL_ ENSG00000198876|ENST00000361264|DCAF12 20.580933911654288 0.2795815587326093 1 Y{I|L}K 3 6 52.435 0.0 0.0 4.4074 0.0 0.0 0.0 782.429329523311 782.429329523311 38.636218907515314 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.4247425010840047 + Y{I|L}K 4.4074 + + 68 + 1 2.276 98499.0 1.0 1634 3281 4908 DOHH2_400M_050219_1,4917 DOHH2_400M_050219_1,4917,YLKNREVRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4918 26.197 364.0 178010.0 25 0 14149.0 + 671 AEMKSAVDY 9 106 507.2335072512132 1012.4524615692264 2 507.2323486208916 MULTI CID FTMS 0 0 0 4908 83014.59375 1.0 0 0.0 10 Unmodified _AEMKSAVDY_ ENSG00000198492|ENST00000373812|YTHDF2;ENST00000604759.1_1_14:39684672-39685536:+|nuORF;nc|ENSG00000198492|Q9Y5A9-2|YTHDF2 26.268140514670165 0.1969607489560049 1 [TA]{[HG]|PP}[HN]VDY 9 5 [TA]{[HG]|PP}[HN]V + + 32.613 -8.1875 -1.1429 3.2212 3.2212 50.984 0.0 0.0 0.0 0.0 21.77558799155623 0.0 0.0 0 0.9247425010840048 0.0 0.2396518287104437 0.0 [TA]{[HG]|PP}[HN]VDY 3.2212 - 143 + 1 2.276 55438.8 1.0 1635 3281 4908 DOHH2_400M_050219_1,4918 DOHH2_400M_050219_1,4918,AEMKSAVDY False True AEMKSAVDY 26.196629 507.232348620892 446262.8125 4908.0 nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;;ENSG00000198492|ENST00000373812|YTHDF2;;ENST00000604759.1_1_14:39684672-39685536:+|nuORF 2.9682610829671225 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4919 26.2 180.0 412750.0 25 0 47627.0 -1 EEWMAQILQ 9 90 582.2756546324191 1162.536756331638 2 582.2759887576103 MULTI CID FTMS 0 0 0 4908 402225.84375 1.0 0 0.0 11 Oxidation (M) _EEWM(Oxidation (M))AQILQ_ ENSG00000089154|ENST00000300648|GCN1 18.1463463914782 0.3454829746528889 1 DG{M(Oxidation (M))|F}{I|L}Q 5 -1 38.962 0.0 0.0 3.3515 0.0 0.0 584.2674427716812 0.0 584.2674427716812 0.0 28.3661653875768 0.0 0.0 0 1.0 0.0 0.0 0.0 DG{M(Oxidation (M))|F}{I|L}Q 3.3515 - 82 1 2.276 57460.2 1.0 1636 3281 4908 DOHH2_400M_050219_1,4919 DOHH2_400M_050219_1,4919,EEWMAQILQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4920 26.207 287.0 237970.0 25 0 52047.0 + 40152 VGMQFVLHLS 10 74 565.8072595216161 1129.599966110032 2 565.8078491091728 MULTI CID FTMS 0 0 0 4908 175535.0 1.0 0 0.0 12 Unmodified _VGMQFVLHLS_ REV__ENSG00000162825|ENST00000698833|NBPF20;REV__ENSG00000219481|ENST00000430580|NBPF1;REV__ENSG00000266338|ENST00000581897|NBPF15;REV__ENSG00000268043|ENST00000698835|NBPF12;REV__ENSG00000270629|ENST00000619423|NBPF14;REV__ENSG00000271425|ENST00000583866|NBPF10;REV__ENSG00000273136|ENST00000620612|NBPF26;REV__ENST00000401087.3_3_1:149089877-149094694:-|nuORF;REV__ENST00000491285.1_1:146215077-146250826:-|nuORF;REV__nc|ENSG00000162825|P0DPF2|NBPF20;REV__nc|ENSG00000219481|Q3BBV0|NBPF1;REV__nc|ENSG00000270629|Q5TI25|NBPF14;REV__nc|ENSG00000273136|B4DH59|NBPF26 10.073929032068715 0.6785112666868882 1 Y 1 -1 13.495 0.0 0.0 1.1947 0.0 0.0 948.525440208468 0.0 948.525440208468 0.0 2.240378209512313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1947 - 8 + 1 2.276 54774.1 1.0 1637 3281 4908 DOHH2_400M_050219_1,4920 DOHH2_400M_050219_1,4920,VGMQFVLHLS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4922 26.211 3.7 9813300.0 25 0 607670.0 + 26595 NVPWTRTI 8 69 493.7725704280341 985.530587922868 2 493.7730590701103 MULTI CID FTMS 0 0 0 4921 14433786.0 0.6273020466326062 1 -0.0422306060791015 1 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 21.74664581756881 0.5868176546531598 1 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L} 9 -1 + 30.391 0.0 0.0 3.0838 3.0838 73.559 0.0 0.0 0.0 3.6527926935124135 12.120889123272 3.6527926935124135 4.771212547196626 0 1.1237125054200234 0.0 0.0 0.0 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L};{[NV]|[RG]}R[NG]VNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GGGT{I|L};{[NV]|[RG]}R[NG]VGGT{I|L} 3.0838;2.5996;2.1494;1.6653 -;-;-;- 96 1 2.276 35191.2 1.0 1638 3282 4921 DOHH2_400M_050219_1,4922 DOHH2_400M_050219_1,4922,NVPWTRTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4923 26.214 151.0 437640.0 25 0 103410.0 + -1 GTHLDMMPG 9 102 487.707470553809 973.400388174418 2 487.7078124880791 MULTI CID FTMS 0 0 0 4921 98058.2421875 0.1216432204491054 4 -0.1498394012451172 2 Oxidation (M) _GTHLDMM(Oxidation (M))PG_ REV__ENSG00000115896|ENST00000428675|PLCL1;REV__nc|ENSG00000115896|Q15111-2|PLCL1 12.531546534597751 0.4974689918368763 1 {[SA]|[TG]}Y 3 -1 31.84 0.0 0.0 3.271 0.0 0.0 0.0 649.2455538385374 649.2455538385374 18.344829805571106 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {[SA]|[TG]}Y 3.271 - 107 + 1 2.276 56680.2 1.0 1639 3282 4921 DOHH2_400M_050219_1,4923 DOHH2_400M_050219_1,4923,GTHLDMMPG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4924 26.217 112.0 619340.0 25 0 51953.0 + 6789 EEALHASHGF 10 120 366.5055174791858 1096.4947230377577 3 366.5051757693291 MULTI CID FTMS 0 0 0 4921 338083.3125 1.0 0 0.0 3 Unmodified _EEALHASHGF_ ENSG00000186010|ENST00000507754|NDUFA13;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13 30.63653989081413 0.2803493085145199 1 EEA{I|L}HASHG{M(Oxidation (M))|F} 10 0 + 56.139 0.0 0.0 5.1199 5.1199 88.19 0.0 0.0 0.0 45.30175449741808 13.037275116073346 13.037275116073346 19.439425527995127 0 0.0 0.7958800173440752 0.3054621874040891 0.0 + + EEA{I|L}HASHG{M(Oxidation (M))|F};[{I|L}A]{[{M(Oxidation (M))|F}D]|MM}AH{I|L}A[HC];{[DS]|[MA]|[CV]|TT}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AH{I|L}A[HC];{[QN]|[E{I|L}]|[KN]}{[CT]|[{M(Oxidation (M))|F}G]}AH{I|L}A[HC];EEA{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{[TV]|[{I|L}S]}{M(Oxidation (M))|F};[AG][KC]SAH{I|L}A[HC];EEA{I|L}H{[WT]|[RM]}[DP];[HS]AA[C(Carbamidomethyl (C))K]{I|L}A[HC];{[DS]|[MA]|[CV]|TT}S{NN|[MP]|[D{I|L}]|[EV]}H{I|L}A[HC];EEA{I|L}[EP][EP][PS] 5.1199;3.347;2.1365;2.0924;1.8352;1.776;1.6049;1.3441;0.94588;0.43854 +;-;-;-;-;-;-;-;-;- + 282 + 1 2.276 58298.0 1.0 1640 3282 4921 DOHH2_400M_050219_1,4924 DOHH2_400M_050219_1,4924,EEALHASHGF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4925 26.22 165.0 449040.0 25 0 47652.0 + -1 LMAQKIEAY 9 100 361.5234692503957 1081.548578351387 3 361.5233032107353 MULTI CID FTMS 0 0 0 4921 260367.234375 1.0 0 0.0 4 Oxidation (M) _LM(Oxidation (M))AQKIEAY_ REV__ENSG00000162994|ENST00000401408|CLHC1;REV__nc|ENSG00000162994|Q8NHS4-2|CLHC1 4.897010918128616 0.7437319958283661 1 Y 1 -1 15.485 0.0 0.0 1.4317 0.0 0.0 900.4742355552918 0.0 900.4742355552918 0.0 3.8805873597486578 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4317 + + 70 + 1 2.276 64451.9 1.0 1641 3282 4921 DOHH2_400M_050219_1,4925 DOHH2_400M_050219_1,4925,LMAQKIEAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4926 26.222 113.0 572430.0 25 0 42593.0 + 6803 EEAPSRPAL 9 100 485.253388452074 968.492223970948 2 485.2545043826103 MULTI CID FTMS 0 0 0 4921 235486.65625 0.0291689958800019 -5 0.2704734802246094 5 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 22.736283301280096 0.2418982879461534 1 EEAPSRPA{I|L} 9 0 + 40.684 0.0 0.0 4.2007 4.2007 85.538 0.0 0.0 0.0 28.90085845775128 2.439423219792374 2.439423219792374 23.80719686320084 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + EEAPSRPA{I|L};[DV]DPSRPA{I|L};{[ET]|[MV]}V[VG][KP][HC] 4.2007;1.7425;1.0043 +;-;- + 154 + 1 2.276 54825.8 1.0 1642 3282 4921 DOHH2_400M_050219_1,4926 DOHH2_400M_050219_1,4926,EEAPSRPAL False True EEAPSRPAL 26.222106 485.25450438261 129039768.0 4921.0 nc|ENSG00000173349|Q587I9|SFT2D3 7.524259885152181 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4927 26.225 143.0 377860.0 25 0 33467.0 + + 32931 SEIESNRSF 9 89 534.7511751302862 1067.4877973273724 2 534.7513915896416 MULTI CID FTMS 0 0 0 4921 178881.296875 0.573086879275349 -2 0.1233673095703125 6 Unmodified _SELEPPYHP_ nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2 21.74664581756881 0.2544899275067181 1 {[ES]|[DT]|[{I|L}C]}{I|L}ES 5 -1 30.713 0.0 0.0 2.8772 0.0 0.0 0.0 519.2335909479124 519.2335909479124 14.259687322722812 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}ES 2.8772 - 51 + 1 2.276 46881.5 1.0 1643 3282 4921 DOHH2_400M_050219_1,4927 DOHH2_400M_050219_1,4927,SELEPPYHP False False SEIESNRSF 26.224981 534.751391589642 2792799.0 4921.0 nc|ENSG00000119139|Q9UDY2-3|TJP2;;nc|ENSG00000119139|Q9UDY2-5|TJP2;;nc|ENSG00000119139|Q9UDY2-6|TJP2;;nc|ENSG00000119139|Q9UDY2-4|TJP2;;ENSG00000119139|ENST00000377245|TJP2;;nc|ENSG00000119139|Q9UDY2-2|TJP2;;nc|ENSG00000119139|Q9UDY2-7|TJP2 3.3582209746042886 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4928 26.23 253.0 223360.0 25 0 11510.0 + 24217 MAKQEGMEM 9 103 527.722076955626 0 527.7220336794853 PEAK CID FTMS 0 0 0 4921 176855.15625 1.0 0 0.0 7 Unmodified _MAKQEGMEM_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 31.26834338654808 0.1046433560557175 1 {M(Oxidation (M))|F}MGC(Carbamidomethyl (C))[KP]T 7 8 27.3 0.0 0.0 2.5915 0.0 0.0 131.04240722980813 98.02534662418202 229.06775385399013 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.6989700043360187 0.4247425010840047 {M(Oxidation (M))|F}MGC(Carbamidomethyl (C))[KP]T 2.5915 - 219 + 1 2.276 50326.6 1.0 1644 3282 4921 DOHH2_400M_050219_1,4928 DOHH2_400M_050219_1,4928,MAKQEGMEM True True MAKQEGMEM 26.229698 527.722033679485 835372.125 4921.0 nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;nc|ENSG00000072571|O75330-4|HMMR;;ENSG00000072571|ENST00000393915|HMMR 6.030299186706543 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4929 26.235 279.0 237140.0 25 0 24074.0 + 25575 NEYPTPRSY 9 94 563.7616044566378 1125.5086559800754 2 563.7619506716728 MULTI CID FTMS 0 0 0 4921 171378.3125 1.0 0 0.0 8 Unmodified _NEYPTPRSY_ ENSG00000237651|ENST00000432605|C2orf74 36.506200033944 0.094635877243972 1 {[QD]|[EN]|[WG]|[KD]|[RS]}YPT 5 4 34.208 0.0 0.0 3.0394 0.0 0.0 0.0 518.2362301786247 518.2362301786247 21.989700043360187 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + {[QD]|[EN]|[WG]|[KD]|[RS]}YPT 3.0394 + + 40 + 1 2.276 55036.5 1.0 1645 3282 4921 DOHH2_400M_050219_1,4929 DOHH2_400M_050219_1,4929,NEYPTPRSY True True NEYPTPRSY 26.234843 563.761950671673 6272838.5 4921.0 ENSG00000237651|ENST00000432605|C2orf74 7.416858514149983 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4930 26.249 800.0 144830.0 25 0 16800.0 + -1 TLLEGEESRMSGE 13 107 727.327250558743 1452.639948184286 2 727.3280517458916 MULTI CID FTMS 0 0 0 4921 89545.546875 0.6122958872145146 -4 0.1955699920654297 9 2 Carbamidomethyl (C) _ELQNC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))LPY_ P04264;ENSEMBL:ENSBTAP00000038253;ENSG00000167768|ENST00000252244|KRT1 7.608950283845883 0.8392484121837455 1 [{I|L}T]{I|L}EGEES[R{M(Oxidation (M))|F}]SGE 13 -1 + 70.513 0.0 0.0 4.8542 4.8542 74.806 0.0 0.0 0.0 48.56302067780168 0.6113983701589092 0.6113983701589092 1.461280356782396 0 1.5 1.6989700043360187 0.7302046884880937 0.0 [{I|L}T]{I|L}EGEES[R{M(Oxidation (M))|F}]SGE;[{I|L}T]{I|L}EGEECQ[{M(Oxidation (M))|F}V]GE;[{I|L}T]{I|L}EWES[R{M(Oxidation (M))|F}]SGE;[{I|L}T]{I|L}EGEES[SG][{M(Oxidation (M))|F}V]GE;[{I|L}T]{I|L}EWECQ[{M(Oxidation (M))|F}V]GE;[{I|L}T]{I|L}EGEEC{[WT]|[RM]}SGE;[{I|L}T]{I|L}EGE[C(Carbamidomethyl (C))Q][KC]SGE;[{I|L}T]{I|L}EGEECK[{M(Oxidation (M))|F}V]GE;[{I|L}T]{I|L}EWES[SG][{M(Oxidation (M))|F}V]GE;[{I|L}T]{I|L}EWEC{[WT]|[RM]}SGE 4.8542;4.7536;4.6041;4.5036;4.5036;4.4796;4.3923;4.3584;4.2518;4.2296 -;-;-;-;-;-;-;-;-;- 665 + 1 2.276 85429.0 0.5699999928474426 1646 3282 4921 DOHH2_400M_050219_1,4930 DOHH2_400M_050219_1,4930,ELQNCKECLPY False False TLLEGEESRMSGE 26.248679 727.328051745892 917045.125 4921.0 P04264;;ENSEMBL:ENSBTAP00000038253;;ENSG00000167768|ENST00000252244|KRT1 8.633692900339762 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4932 26.265 800.0 236860.0 25 0 29030.0 3543 CYCRFFNAF 9 147 585.7442186124161 1169.4738842916322 2 585.7446166872978 MULTI CID FTMS 0 0 0 4931 182924.3125 0.7715343661356614 -1 0.0422306060791015 1 Unmodified _CYCRFFNAF_ ENSG00000159723|ENST00000290953|AGRP 30.22481116460888 0.1466181017706357 1 DEAQQNA{M(Oxidation (M))|F} 8 6 80.342 0.0 0.0 6.87 0.0 0.0 248.0914021222672 0.0 248.0914021222672 0.0 55.98381297763133 0.0 0.0 0 0.805462187404089 0.0 0.6549471895720985 1.1861818737241734 DEAQQNA{M(Oxidation (M))|F} 6.87 - 1795 1 2.276 142481.0 0.6299999952316284 1647 3283 4931 DOHH2_400M_050219_1,4932 DOHH2_400M_050219_1,4932,CYCRFFNAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4933 26.267 96.0 688330.0 25 0 106800.0 + 24701 MNPPHPAR 8 85 460.23361232059176 918.4526717079837 2 460.2313720583916 MULTI CID FTMS 0 0 0 4931 563114.125 0.5364809954040375 -11 0.5684165954589844 2 Unmodified _MNPPHPAR_ REV__ENSG00000007202|ENST00000528896|BLTP2;REV__nc|ENSG00000007202|Q14667-2|BLTP2 13.50788311687929 0.7113601687236069 1 [MN]PS 4 -1 38.474 0.0 0.0 4.189 0.0 0.0 0.0 486.2574862115844 486.2574862115844 11.105384569831005 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.75 0.0 [MN]PS 4.189 - 216 + 1 2.276 57406.9 1.0 1648 3283 4931 DOHH2_400M_050219_1,4933 DOHH2_400M_050219_1,4933,MNPPHPAR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4934 26.281 800.0 172030.0 25 0 10337.0 + -1 YSDPSTGEPATY 12 147 644.2724522562536 1286.530351579307 2 644.2730590701103 MULTI CID FTMS 0 0 0 4931 132659.0 0.6715313317843349 -1 0.0422306060791015 3 Carbamidomethyl (C) _TC(Carbamidomethyl (C))ECVFPPAYT_ nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;ENSG00000178209|ENST00000345136|PLEC 17.11289562659939 0.6791789249425932 1 [PA]T{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M]E[PA]TY 11 -1 + 45.097 0.0 0.0 3.5053 3.5053 75.902 0.0 0.0 0.0 6.275563631597322 14.523594665376066 6.275563631597322 6.275563631597322 0 1.424742501084005 1.0969100130080565 1.045114016114533 0.0 [PA]T{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M]E[PA]TY;{[{M(Oxidation (M))|F}C]|[YS]}VTYY{NN|[MP]|[D{I|L}]|[EV]}TY;[TA]P{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M]E[PA]TY;[PA]TY{M(Oxidation (M))|F}H[C(Carbamidomethyl (C))Q]TY;[VG]E{[DA]|[EG]}DSY[PA]TY;[PS]T{[DA]|[EG]}DSY[PA]TY;{[{M(Oxidation (M))|F}C]|[YS]}D{[DA]|[EG]}RE[PA]TY;[TA]D[PS]DSY[PA]TY;[YT]AP{M(Oxidation (M))|F}H[C(Carbamidomethyl (C))Q]TY;[MT]D{[CT]|[{M(Oxidation (M))|F}G]}RE[PA]TY 3.5053;3.0175;2.8536;2.715;2.6432;2.5807;2.5049;2.4532;2.255;2.0818 -;-;-;-;-;-;-;-;-;- 1612 1 2.276 99186.4 0.6700000166893005 1649 3283 4931 DOHH2_400M_050219_1,4934 DOHH2_400M_050219_1,4934,TCECVFPPAYT False False YSDPSTGEPATY 26.280897 644.27305907011 3270454.75 4931.0 nc|ENSG00000178209|Q15149-5|PLEC;;nc|ENSG00000178209|Q15149-8|PLEC;;nc|ENSG00000178209|Q15149-6|PLEC;;nc|ENSG00000178209|Q15149|PLEC;;nc|ENSG00000178209|Q15149-9|PLEC;;nc|ENSG00000178209|Q15149-3|PLEC;;nc|ENSG00000178209|Q15149-7|PLEC;;nc|ENSG00000178209|Q15149-2|PLEC;;ENSG00000178209|ENST00000345136|PLEC 6.861969629923503 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4935 26.295 800.0 127490.0 25 0 24442.0 + 26056 NMPSKTEL 8 90 919.456289405123 918.449012938523 1 919.4567138552666 MULTI CID FTMS 0 0 0 4931 77179.015625 0.8339904685009045 -3 0.165597915649414 4 Unmodified _NMPSKTEL_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 47.594388314883695 0.1505624111774444 1 [MN]PSKTE{I|L} 8 0 + 53.626 0.0 0.0 5.8387 5.8387 85.587 0.0 0.0 0.0 6.989700043360188 19.865393123947115 6.989700043360188 8.4176003468815 0 0.9247425010840048 0.0 0.3807196863200844 0.6237125054200234 + + [MN]PSKTE{I|L};[KS]PTE[MN]{I|L};[NP]MSKTE{I|L};[KS]PT[MN]E{I|L};[PS]KTE[MN]{I|L};[PS]KT[MN]E{I|L};[KS]P[MN]TE{I|L};[TP]{[QC]|[C(Carbamidomethyl (C))A]}KTE{I|L};[PS][MN]KTE{I|L};[TP][KS]E[MN]{I|L} 5.8387;4.9222;4.7748;4.5945;4.0548;3.7271;3.7208;3.5805;2.9882;2.9334 +;-;-;-;-;-;-;-;-;- + 270 1 2.276 74306.9 0.4699999988079071 1650 3283 4931 DOHH2_400M_050219_1,4935 DOHH2_400M_050219_1,4935,NMPSKTEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4937 26.3 61.0 969890.0 25 0 81191.0 + 12354 GTDGHVHLY 9 98 499.7379664364471 997.4613799396942 2 499.7382079958916 MULTI CID FTMS 0 0 0 4936 802900.375 0.2815745424328148 3 -0.097696304321289 1 Unmodified _GTDGHVHLY_ ENSG00000119333|ENST00000372715|DYNC2I2 56.541270873467816 0.0279970378729908 1 H{I|L}Y 3 6 31.682 0.0 0.0 3.1763 0.0 0.0 566.2446573828568 0.0 566.2446573828568 0.0 24.604093769761874 0.0 0.0 0 1.0 0.0 0.0 0.0 + H{I|L}Y 3.1763 + + 126 + 1 2.273 49916.9 1.0 1651 3284 4936 DOHH2_400M_050219_1,4937 DOHH2_400M_050219_1,4937,GTDGHVHLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4938 26.306 352.0 141440.0 25 0 14096.0 + 45457 YTETEPYHNY 10 91 658.7753606497913 1315.5361683663823 2 658.7751953005791 MULTI CID FTMS 0 0 0 4936 123359.90625 0.1247414962847892 4 -0.1589374542236328 2 Unmodified _YTETEPYHNY_ ENSG00000158545|ENST00000301011|ZC3H18;ENST00000568072.1_1_16:88666261-88675531:+|nuORF 36.506200033944 0.1944608063770638 1 YTE{[ET]|[MV]}YPWNN 10 4 + 73.805 0.0 0.0 5.6102 5.6102 78.031 0.0 0.0 0.0 33.52182518111363 9.164539485499247 9.164539485499247 1.7609125905568137 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.3054621874040891 YTE{[ET]|[MV]}YPWNN;YTE{[ET]|[MV]}YPHYN;YTE[YT]EPWNN;YTE[YT]EPHYN;YTE{[ET]|[MV]}Y[PG]ENN;YTE{[ET]|[MV]}YPWGGN;YTE[YT]EPWGGN;YTE{[ET]|[MV]}YP{[DS]|[MA]|[CV]|TT}[DP];YT[{M(Oxidation (M))|F}T][C(Carbamidomethyl (C))N]PWNN;YT[{M(Oxidation (M))|F}T][C(Carbamidomethyl (C))N]PHYN 5.6102;5.4764;5.1526;5.0187;4.9241;4.9136;4.4559;4.4325;4.4137;4.2799 -;-;-;-;-;-;-;-;-;- 1142 + 1 2.273 43252.1 1.0 1652 3284 4936 DOHH2_400M_050219_1,4938 DOHH2_400M_050219_1,4938,YTETEPYHNY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4939 26.308 83.0 722530.0 25 0 106410.0 42302 VSSTWDRQ 8 76 489.73524776239327 977.4559425915866 2 489.7355529665947 MULTI CID FTMS 0 0 0 4936 432334.96875 0.2261084704650087 -4 0.2116756439208984 3 Unmodified _VSSTWDRQ_ ENSG00000157500|ENST00000288266|APPL1;ENST00000482800.5_1_3:57261911-57301862:+|nuORF 19.256988751693697 0.6264283240490721 1 {[CA]|SS}{I|L}SWDRQ 8 3 + 51.631 0.0 0.0 5.2822 5.2822 78.422 0.0 0.0 0.0 36.938200260161125 8.187587626244124 8.187587626244124 3.0102999566398125 0 0.4247425010840047 0.0 0.5 0.4247425010840047 {[CA]|SS}{I|L}SWDRQ;{[CA]|SS}S{I|L}WDRQ;{[CA]|SS}{I|L}D[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}RDG{M(Oxidation (M))|F}{I|L}Q;{[WT]|[RM]}DS[QT]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}DADRQ;{[CA]|SS}{I|L}DS[VS]RQ;{[CA]|SS}D{I|L}S[VS]RQ;{[CA]|SS}{I|L}D{[WS]|[C(Carbamidomethyl (C)){I|L}]}RQ 5.2822;4.9742;4.3869;4.2068;4.1285;4.079;3.5877;3.5151;3.3349;3.1603 -;-;-;-;-;-;-;-;-;- 285 + 1 2.273 50220.5 1.0 1653 3284 4936 DOHH2_400M_050219_1,4939 DOHH2_400M_050219_1,4939,VSSTWDRQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4940 26.312 200.0 446900.0 25 0 58619.0 + 11925 GMDNDFHHY 9 125 379.1471313946325 1134.4195647840977 3 379.1470519900322 MULTI CID FTMS 0 0 0 4936 306337.9375 0.9297632705524926 -1 0.0460777282714843 4 Unmodified _GMDNDFHHY_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 38.15118350030904 0.0856056900103839 1 {[MG]|[TS]}[DN]D{M(Oxidation (M))|F}HHY 9 0 + 40.596 0.0 0.0 3.5785 3.5785 77.738 0.0 0.0 0.0 8.657424843733637 8.293037728310246 8.293037728310246 8.293037728310246 0 0.2742275032520141 0.0 0.0 0.5 + + {[MG]|[TS]}[DN]D{M(Oxidation (M))|F}HHY;{[MG]|[TS]}[DN]D{M(Oxidation (M))|F}HYH;[DN]D{[{M(Oxidation (M))|F}H]|[RQ]}[DV]HH 3.5785;2.8475;0.58369 +;-;- + 95 + 1 2.273 74374.4 1.0 1654 3284 4936 DOHH2_400M_050219_1,4940 DOHH2_400M_050219_1,4940,GMDNDFHHY True True GMDNDFHHY 26.312103 379.147051990032 1416008.5 4936.0 nc|ENSG00000083520|Q9Y2L1-2|DIS3;;ENSG00000083520|ENST00000377767|DIS3 9.534374237060549 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4941 26.315 167.0 493880.0 25 0 89462.0 + 1972 ANDYRRQLQ 9 97 582.2995211041012 1162.5844892750024 2 582.2998535037041 MULTI CID FTMS 0 0 0 4936 227120.265625 0.7237928351779415 -2 0.0883083343505859 5 Unmodified _ANDYRRQLQ_ ENSG00000131095|ENST00000588735|GFAP;nc|ENSG00000131095|P14136-2|GFAP;nc|ENSG00000131095|P14136-3|GFAP 11.640296217721598 0.521594087909532 1 WH{I|L}Q 4 7 27.155 0.0 0.0 2.3357 0.0 0.0 580.295501093165 0.0 580.295501093165 0.0 6.185625271001172 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 WH{I|L}Q 2.3357 - 88 + 1 2.273 67219.5 1.0 1655 3284 4936 DOHH2_400M_050219_1,4941 DOHH2_400M_050219_1,4941,ANDYRRQLQ False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4942 26.322 356.0 213770.0 25 0 19638.0 + 8038 ENKSCNDKLQ 10 106 618.2857945326306 1234.557036132061 2 618.2856323122978 MULTI CID FTMS 0 0 0 4936 172060.0 0.733695411372111 -2 0.0883083343505859 6 Carbamidomethyl (C) _ENKSC(Carbamidomethyl (C))NDKLQ_ ENSG00000138193|ENST00000371380|PLCE1;nc|ENSG00000138193|Q9P212-2|PLCE1 43.77239144664712 0.1177314611616471 1 {[QD]|[EN]|[WG]|[KD]|[RS]}ERQDG{M(Oxidation (M))|F}{I|L}Q 10 6 + 70.57 0.0 0.0 5.7162 5.7162 76.75 0.0 0.0 0.0 0.5254004593402328 9.164539485499256 0.5254004593402328 0.5254004593402328 0 1.3494850021680094 0.0 0.3494850021680094 0.6747425010840047 {[QD]|[EN]|[WG]|[KD]|[RS]}ERQDG{M(Oxidation (M))|F}{I|L}Q;[AG]DERQDG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}E[VG]QDG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}ER[AG]DG{M(Oxidation (M))|F}{I|L}Q;[AG]DER[AG]DG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}ER{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}E[VG][AG]DG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}E[VG]{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;[AG]DE[VG]{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}ERQDGKME 5.7162;5.6737;4.9739;4.9739;4.9342;4.2986;4.2345;3.5527;3.5102;3.19 -;-;-;-;-;-;-;-;-;- 558 1 2.273 62337.8 1.0 1656 3284 4936 DOHH2_400M_050219_1,4942 DOHH2_400M_050219_1,4942,ENKSCNDKLQ True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4944 26.338 800.0 104540.0 25 0 7963.6 26044 NMLVTNFWMST 11 104 672.3099480469576 1342.6053431607152 2 672.3112670779228 MULTI CID FTMS 0 0 0 4943 93182.171875 0.195002886299296 4 -0.1803474426269531 1 Unmodified _NMLVTNFWMST_ ENSG00000066405|ENST00000183605|CLDN18;nc|ENSG00000066405|P56856-2|CLDN18 11.494710602746466 0.7960433852372589 1 [MN]PN{I|L}NADQ 9 8 69.759 0.0 0.0 5.1958 0.0 0.0 0.0 342.1530855768188 342.1530855768188 42.30713133096572 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.8494850021680094 [MN]PN{I|L}NADQ 5.1958 - 545 + 1 2.273 63502.6 0.6100000143051147 1657 3285 4943 DOHH2_400M_050219_1,4944 DOHH2_400M_050219_1,4944,NMLVTNFWMST False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4945 26.34 105.0 426910.0 25 0 42494.0 + -1 STENNCKKI 9 79 547.2671126261492 1092.5196723190984 2 547.2672607302666 MULTI CID FTMS 0 0 0 4943 319203.59375 1.0 0 0.0 2 Carbamidomethyl (C) _STENNC(Carbamidomethyl (C))KKI_ REV__ENSG00000134853|ENST00000257290|PDGFRA;REV__ENST00000509092.5_1_4:55124935-55146696:+|nuORF;REV__nc|ENSG00000134853|P16234-3|PDGFRA 21.74664581756881 0.2544899275067181 1 {[MG]|[TS]}EPN{[QV]|[N{I|L}]|[RA]|[KV]}RY 9 -1 + 40.084 0.0 0.0 3.669 3.669 79.925 0.0 0.0 0.0 28.82504001445195 1.974987195809419 1.974987195809419 9.208187539523747 0 0.4247425010840047 0.0 0.4247425010840047 0.9247425010840048 {[MG]|[TS]}EPN{[QV]|[N{I|L}]|[RA]|[KV]}RY;{[MG]|[TS]}EPGG{[QV]|[N{I|L}]|[RA]|[KV]}RY;{[MG]|[TS]}EP[WP][{I|L}T]Y;[H{I|L}]E[KG]N[HA]{[MG]|[TS]};[H{I|L}]S{[QV]|[N{I|L}]|[RA]|[KV]}N[HA]{[MG]|[TS]};[H{I|L}]E[PA][NP]Q{[MG]|[TS]};{[MG]|[TS]}[WR]{NN|[MP]|[D{I|L}]|[EV]}Q{[MG]|[TS]};[H{I|L}]E[W{I|L}][HA]{[MG]|[TS]} 3.669;2.8261;1.4543;1.1333;1.1333;0.44801;0.40118;0.12565 -;-;-;-;-;-;-;- 103 + 1 2.273 42927.8 1.0 1658 3285 4943 DOHH2_400M_050219_1,4945 DOHH2_400M_050219_1,4945,STENNCKKI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4946 26.346 295.0 336400.0 25 0 15217.0 5819 DPRLHEEAR 9 124 374.8596315755356 1121.5570653268069 3 374.8598815798759 MULTI CID FTMS 0 0 0 4943 147668.484375 0.8411315191970805 1 -0.0344409942626953 3 Unmodified _DPRLHEEAR_ ENST00000359128.9_1_16:3614897-3617284:-|nuORF;ENST00000603055.1_1_16:3614272-3617284:-|nuORF 7.289230182591677 0.6602208344931196 1 Y 1 9 13.979 0.0 0.0 1.2464 0.0 0.0 940.4827225307116 0.0 940.4827225307116 0.0 0.7576153378247223 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2464 - 110 + 1 2.273 84070.3 1.0 1659 3285 4943 DOHH2_400M_050219_1,4946 DOHH2_400M_050219_1,4946,DPRLHEEAR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4947 26.356 601.0 128200.0 25 0 19491.0 + -1 VLYHYVAVNNPKKQE 15 80 601.3252080621997 1800.953794786799 3 601.3270751833916 MULTI CID FTMS 0 0 0 4943 80715.734375 1.0 0 0.0 4 ENSG00000228474|ENST00000456793|OST4 1 [{I|L}V]YHYVAVNN 10 -1 42.034 0.0 0.0 2.334 0.0 0.0 0.0 625.3322237604124 625.3322237604124 40.04436601482109 0.0 0.0 0.0 0 1.1365006360318688 2.0 0.0 0.0 [{I|L}V]YHYVAVNN 2.334 - 131 + 1 2.273 65620.1 1.0 1660 3285 4943 DOHH2_400M_050219_1,4947 DOHH2_400M_050219_1,4947, False False VLYHYVAVNNPKKQE 26.356293 601.327075183392 333136.1875 4943.0 ENSG00000228474|ENST00000456793|OST4 10.258723894755043 3.0 False 15.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4949 26.373 800.0 183780.0 25 0 16079.0 + 30529 RELEKDMHYY 10 137 461.8835442874857 1382.6288034626573 3 461.8829528689384 MULTI CID FTMS 0 0 0 4948 65054.171875 0.0935854262453782 5 -0.2033252716064453 1 Unmodified _RELEKDMHYY_ ENSG00000083750|ENST00000374941|RRAGB;ENSG00000155876|ENST00000380527|RRAGA;ENST00000474757.1_1_X:55757854-55777647:+|nuORF;ENST00000498762.1_1_X:55748624-55758085:+|nuORF;nc|ENSG00000083750|Q5VZM2|RRAGB 23.015651743759182 0.4515786786615758 1 YY 2 8 16.938 0.0 0.0 1.2251 0.0 0.0 1038.4918233374603 0.0 1038.4918233374603 0.0 1.4536501951208436 0.0 0.0 0 0.5 0.0 0.0 0.0 + YY 1.2251 + + 238 + 1 2.273 117990.6 0.4099999964237213 1661 3286 4948 DOHH2_400M_050219_1,4949 DOHH2_400M_050219_1,4949,RELEKDMHYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4950 26.379 337.0 366680.0 25 0 74491.0 5931 DQARLGMCRQ 10 117 589.283462815693 1176.552372698186 2 589.2834350466728 MULTI CID FTMS 0 0 0 4948 228128.34375 1.0 0 0.0 2 Unmodified _DQARLGMCRQ_ ENSG00000174371|ENST00000366548|EXO1;nc|ENSG00000174371|Q9UQ84-4|EXO1 34.93206674587334 0.2110832994570416 1 {[QD]|[EN]|[WG]|[KD]|[RS]}ARGWG{M(Oxidation (M))|F}{I|L}Q 10 4 + 59.806 0.0 0.0 5.0832 5.0832 75.465 0.0 0.0 0.0 5.549537427956111 39.56853210194758 5.549537427956111 1.383026981662816 0 1.3494850021680094 0.0 0.3252574989159953 0.5994850021680094 {[QD]|[EN]|[WG]|[KD]|[RS]}ARGWG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}ARQDG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}ARGADG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}A[VG]GWG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}A[VG]QDG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}A[VG]GADG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}AR{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}A[VG]{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;{[QS]|[NT]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HT]G{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}AQQ{[CP]|[EA]}{M(Oxidation (M))|F}{I|L}Q 5.0832;4.9656;4.757;4.3042;4.1867;3.9811;3.9577;3.1751;3.1144;3.0348 -;-;-;-;-;-;-;-;-;- 602 1 2.273 93912.2 1.0 1662 3286 4948 DOHH2_400M_050219_1,4950 DOHH2_400M_050219_1,4950,DQARLGMCRQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4951 26.393 800.0 62878.0 25 0 3195.1 -1 0 101 700.3150588403317 699.3077823737317 1 700.3134643435478 MULTI CID FTMS 0 0 0 4948 91777.5078125 1.0 0 0.0 3 1 {[QG]|[NA]}GA 4 -1 21.049 0.0 0.0 3.01 0.0 0.0 0.0 383.14567845210985 383.14567845210985 9.790280966281738 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.7059771852360797 {[QG]|[NA]}GA 3.01 - 44 1 2.273 40522.6 0.550000011920929 1663 3286 4948 DOHH2_400M_050219_1,4951 DOHH2_400M_050219_1,4951, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4953 26.403 471.0 189830.0 25 0 31161.0 + 6211 DTKPLFQAY 9 125 541.7809490896021 1081.5473452460042 2 541.7809936404228 MULTI CID FTMS 0 0 0 4952 97725.421875 0.1109368890595457 5 -0.2430839538574218 1 Unmodified _DTKPLFQAY_ REV__ENSG00000170832|ENST00000300896|USP32 32.30548876998284 0.1201446275138228 1 AEAY 4 -1 38.22 0.0 0.0 3.5338 0.0 0.0 629.3570423810562 0.0 629.3570423810562 0.0 30.560931587959672 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 AEAY 3.5338 - 287 1 2.273 73055.4 1.0 1664 3287 4952 DOHH2_400M_050219_1,4953 DOHH2_400M_050219_1,4953,DTKPLFQAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4954 26.412 508.0 283090.0 25 0 59384.0 + 779 AESGDSVKMY 10 115 543.7414383504828 1085.4683237677657 2 543.7422363162041 MULTI CID FTMS 0 0 0 4952 164698.6875 1.0 0 0.0 2 Unmodified _AESGDSVKMY_ ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4 43.9818466556824 0.1155196613165264 1 {[CP]|[EA]}SGDSVKMY 10 0 + 55.544 0.0 0.0 5.117 5.117 87.35 0.0 0.0 0.0 35.09856453032994 13.037275116073346 13.037275116073346 14.235162698957282 0 1.0941876774005248 0.0 0.4247425010840047 0.0 + + {[CP]|[EA]}SGDSVKMY;{[WT]|[RM]}G[WD]KMY;{[CP]|[EA]}SGD[KA]V{M(Oxidation (M))|F}Y;{[CP]|[EA]}SG[WK]V{M(Oxidation (M))|F}Y;{[CP]|[EA]}SGDSV[DV][HA];{[MS]|[{M(Oxidation (M))|F}A]}Y[YT]KMY;{[CP]|[EA]}[QA]{M(Oxidation (M))|F}VKMY;{[CP]|[EA]}SG{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}MY;{[CP]|[EA]}[WC(Carbamidomethyl (C))]VKMY;{[CP]|[EA]}SGDT[W{I|L}][HA] 5.117;3.8056;3.6669;3.3425;3.1158;2.8053;2.6852;2.4325;2.3657;2.3478 +;-;-;-;-;-;-;-;-;- + 787 + 1 2.273 112313.1 1.0 1665 3287 4952 DOHH2_400M_050219_1,4954 DOHH2_400M_050219_1,4954,AESGDSVKMY True True AESGDSVKMY 26.412224 543.742236316204 883434.6875 4952.0 nc|ENSG00000156304|O95104-3|SCAF4;;ENSG00000156304|ENST00000286835|SCAF4;;nc|ENSG00000156304|O95104-2|SCAF4;;ENST00000467731.1_1_21:33057290-33073360:-|nuORF 5.835902690887451 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4955 26.416 228.0 345130.0 25 0 42926.0 + 6379 DWAKLIKRL 9 106 381.5741831463996 1141.700720039399 3 381.5735961794853 MULTI CID FTMS 0 0 0 4952 151706.234375 0.0112488651959361 12 -0.6107311248779297 3 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 4.5288652416199255 0.7565837746943351 1 K{I|L}K[QP]E 6 -1 23.416 0.0 0.0 2.051 0.0 0.0 400.2790089337906 0.0 400.2790089337906 0.0 8.812281309285623 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.051 - 64 1 2.273 66937.3 1.0 1666 3287 4952 DOHH2_400M_050219_1,4955 DOHH2_400M_050219_1,4955,DWAKLIKRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4956 26.428 689.0 185010.0 25 0 9524.0 + 26030 NMEADPGQY 9 143 512.7052952073203 1023.3960374814408 2 512.7055541872978 MULTI CID FTMS 0 0 0 4952 126437.2734375 0.2934050214118608 -3 0.097696304321289 4 Unmodified _NMEADPGQY_ ENSG00000172270|ENST00000333511|BSG;nc|ENSG00000172270|P35613-2|BSG;nc|ENSG00000172270|P35613-3|BSG;nc|ENSG00000172270|P35613-4|BSG 92.65332237495696 0.0139087009896299 1 [MN]EADPGQY 9 0 + 69.227 0.0 0.0 6.7644 6.7644 90.278 0.0 0.0 0.0 31.06058197452127 50.63338911073528 31.06058197452127 9.208187539523747 0 0.7544321917401079 1.5228787452803376 0.4916440611282626 0.868415180652539 + + [MN]EADPGQY;[MN]EADPG[AG]Y;[AG][MD]ADPGQY;[MN][C(Carbamidomethyl (C))H][TA]QY;{[CP]|[EA]}{[CA]|SS}ADPGQY;[PS][CS]ADPGQY;{[CP]|[EA]}[MN]DPGQY;{[CP]|[EA]}D[MN]PGQY;[C(Carbamidomethyl (C))H]MN[TA]QY;[{M(Oxidation (M))|F}V]{[CP]|[EA]}[HM]QY 6.7644;5.8647;3.4651;2.9895;2.2785;2.1454;1.9959;1.9012;1.2508;1.046 +;-;-;-;-;-;-;-;-;- + 454 1 2.273 102645.7 1.0 1667 3287 4952 DOHH2_400M_050219_1,4956 DOHH2_400M_050219_1,4956,NMEADPGQY True True NMEADPGQY 26.428486 512.705554187298 2043366.625 4952.0 nc|ENSG00000172270|P35613-4|BSG;;ENSG00000172270|ENST00000333511|BSG;;nc|ENSG00000172270|P35613-3|BSG;;nc|ENSG00000172270|P35613-2|BSG 7.516192436218262 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4957 26.432 175.0 529130.0 25 0 218210.0 + 27213 PGKSALSDLFE 11 83 388.5355089674536 1162.5846975025609 3 388.5349304080009 MULTI CID FTMS 0 0 0 4952 119990.9296875 0.8376676457283738 1 -0.0612411499023437 5 Unmodified _PGKSALSDLFE_ REV__ENSG00000198218|ENST00000395443|QRICH1 7.101721422024254 0.8416415510090076 1 E{M(Oxidation (M))|F} 2 -1 21.454 0.0 0.0 1.8453 0.0 0.0 868.4626463502807 0.0 868.4626463502807 0.0 10.616194758652028 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 E{M(Oxidation (M))|F} 1.8453 - 20 1 2.273 80498.5 1.0 1668 3287 4952 DOHH2_400M_050219_1,4957 DOHH2_400M_050219_1,4957,PGKSALSDLFE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4958 26.44 471.0 218270.0 25 0 20457.0 + 6801 EEAPSQQGF 9 137 496.7193650713369 991.4241772094738 2 496.7195617556572 MULTI CID FTMS 0 0 0 4952 102870.0625 0.7816244845411618 -1 0.0361652374267578 6 Unmodified _EEAPSQQGF_ ENSG00000188785|ENST00000336128|ZNF548;nc|ENSG00000188785|Q8NEK5|ZNF548 34.10243960390752 0.1078313939113124 1 EEA 3 6 27.192 0.0 0.0 2.7427 0.0 0.0 0.0 659.2793462370706 659.2793462370706 5.499402189919813 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.7742275032520141 0.0 + EEA 2.7427 + + 254 1 2.273 81944.9 1.0 1669 3287 4952 DOHH2_400M_050219_1,4958 DOHH2_400M_050219_1,4958,EEAPSQQGF True True EEAPSQQGF 26.440213 496.719561755657 790629.1875 4952.0 ENSG00000188785|ENST00000336128|ZNF548;;nc|ENSG00000188785|Q8NEK5|ZNF548 3.162291328112284 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4959 26.443 160.0 309570.0 25 0 15276.0 + -1 SEIEAKVRY 9 99 548.2912747674399 547.2839983008398 1 548.2910034060478 MULTI CID FTMS 0 0 0 4952 269703.21875 0.4280807268555747 22 -0.9502506256103516 7 nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1 1 N 1 -1 3.0989 0.0 0.0 0.56624 0.0 0.0 135.17875645689293 295.0362642877563 430.2150207446492 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.56624 - 18 + 1 2.273 43425.6 1.0 1670 3287 4952 DOHH2_400M_050219_1,4959 DOHH2_400M_050219_1,4959, False False SEIEAKVRY 26.443382 548.291003406048 509643.71875 4952.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 -0.3308000961939494 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4960 26.449 257.0 222460.0 25 0 19927.0 -1 0 97 567.2779262351563 566.2706497685563 1 567.2779418826103 MULTI CID FTMS 0 0 0 4952 279195.09375 1.0 0 0.0 8 1 VQ 2 -1 20.969 0.0 0.0 3.703 0.0 0.0 321.13260496141834 0.0 321.13260496141834 0.0 6.365006360318688 0.0 0.0 0 0.0 0.0 0.0 0.0 VQ 3.703 - 37 1 2.273 53425.4 1.0 1671 3287 4952 DOHH2_400M_050219_1,4960 DOHH2_400M_050219_1,4960, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4961 26.454 236.0 371210.0 25 0 24658.0 28394 PSPHGLAG 8 115 368.19297938892703 734.3714058446541 2 368.1920349001884 MULTI CID FTMS 0 0 0 4952 158034.046875 0.2847155068510673 -6 0.2579555511474609 9 Unmodified _PSPHGLAG_ ENST00000300976.8_1_19:18780088-18780439:+|nuORF 9.347437153973935 0.7675937258251505 1 {I|L}Q 2 7 30.529 0.0 0.0 4.1571 0.0 0.0 475.2182514030509 0.0 475.2182514030509 0.0 20.440228147639203 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3807196863200844 {I|L}Q 4.1571 - 79 + 1 2.273 74601.0 1.0 1672 3287 4952 DOHH2_400M_050219_1,4961 DOHH2_400M_050219_1,4961,PSPHGLAG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4963 26.461 152.0 397730.0 25 0 25715.0 + 32707 SEAGPNQTF 9 99 475.7144049856267 949.4142570380534 2 475.7140991091728 MULTI CID FTMS 0 0 0 4962 209824.328125 0.2486761537530501 5 -0.2530097961425781 1 Unmodified _SEAGPNQTF_ ENSG00000163565|ENST00000295809|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16 11.640296217721598 0.521594087909532 1 KT{M(Oxidation (M))|F} 3 7 23.188 0.0 0.0 2.4423 0.0 0.0 555.1947573816066 0.0 555.1947573816066 0.0 12.350132189775309 0.0 0.0 0 0.0 0.0 0.0 0.0 KT{M(Oxidation (M))|F} 2.4423 - 91 + 1 2.267 53249.3 1.0 1673 3288 4962 DOHH2_400M_050219_1,4963 DOHH2_400M_050219_1,4963,SEAGPNQTF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4964 26.474 800.0 111450.0 25 0 5657.3 -1 0 58 877.0050416772127 4379.988826053063 5 877.4056884646416 MULTI CID FTMS 0 0 0 4962 44014.58203125 0.434581613877197 1 -0.0485000610351562 2 1 AA 2 -1 10.969 0.0 0.0 0.25044 0.0 0.0 583.1459840058377 3651.7536299821018 4234.899613987939 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AA 0.25044 - 15 + 1 2.267 70716.3 0.4799999892711639 1674 3288 4962 DOHH2_400M_050219_1,4964 DOHH2_400M_050219_1,4964, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4965 26.477 107.0 822520.0 25 0 105850.0 + 26052 NMPKKPVL 8 83 463.7775952393441 925.5406375454884 2 463.7779418826103 MULTI CID FTMS 0 0 0 4962 486994.0 0.1917166935627768 -4 0.1589374542236328 3 Unmodified _NMPKKPVL_ ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2 38.15118350030904 0.2652218139009398 1 NMPKK[VP]{I|L} 8 0 + 52.121 0.0 0.0 5.6314 5.6314 91.772 0.0 0.0 0.0 35.92268479296628 2.65153777800478 2.65153777800478 52.120572375850216 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + NMPKK[VP]{I|L} 5.6314 + + 116 + 1 2.267 73630.1 1.0 1675 3288 4962 DOHH2_400M_050219_1,4965 DOHH2_400M_050219_1,4965,NMPKKPVL False True NMPKKPVL 26.476615 463.77794188261 29629410.0 4962.0 nc|ENSG00000136108|Q8WWK9-4|CKAP2;;nc|ENSG00000136108|Q8WWK9-6|CKAP2;;ENSG00000136108|ENST00000258607|CKAP2;;nc|ENSG00000136108|Q8WWK9|CKAP2 3.648325721422831 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4966 26.482 284.0 269910.0 25 0 29478.0 + + 24506 MIMTKRNL 8 88 503.7797592336482 1005.5449655340964 2 503.7802917361259 MULTI CID FTMS 0 0 0 4962 113675.375 0.4467618988374293 -3 0.1318473815917968 4 Unmodified _MIMKVRQT_ ENST00000487151.1_1_3:40352488-40352533:+|nuORF 30.63653989081413 0.3996269429323407 1 M{I|L}MKK 5 -1 69.851 0.0 0.0 6.9466 0.0 0.0 0.0 371.15281091861567 371.15281091861567 56.03917193908117 0.0 0.0 0.0 0 1.174742501084005 2.0 0.0 0.7302046884880937 M{I|L}MKK 6.9466 - 115 + 1 2.267 65019.9 1.0 1676 3288 4962 DOHH2_400M_050219_1,4966 DOHH2_400M_050219_1,4966,MIMKVRQT False False MIMTKRNL 26.481829 503.780291736126 1251268.25 4962.0 ENST00000487151.1_1_3:40352488-40352533:+|nuORF 3.762699842453003 2.0 False 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 4967 26.496 800.0 161810.0 25 0 6983.5 + + -1 REIHQDWANREY 12 111 539.5901764803607 1615.748700041282 3 539.5899536013603 MULTI CID FTMS 0 0 0 4962 112292.9453125 0.7516861232965273 -2 0.0974063873291015 5 Oxidation (M) _YRESKKWM(Oxidation (M))YYF_ ENSG00000254999|ENST00000530758|BRK1;nc|ENSG00000254999|Q8WUW1-2|BRK1 2.0839675508343545 0.8653156407712262 1 {[RE]|[WV]}{I|L}HQDWAN{[RE]|[WV]}Y 12 -1 {[RE]|[WV]}{I|L}H + + 44.646 16.198 3.026 2.7632 2.7632 49.988 0.0 0.0 0.0 0.0 28.44843468456581 0.0 0.0 0 1.424742501084005 0.0 0.5 0.6549471895720985 {[RE]|[WV]}{I|L}HQDWAN{[RE]|[WV]}Y 2.7632 - 497 + 1 2.267 102895.2 0.550000011920929 1677 3288 4962 DOHH2_400M_050219_1,4967 DOHH2_400M_050219_1,4967,YRESKKWMYYF False False REIHQDWANREY 26.495644 539.58995360136 744376.1875 4962.0 ENSG00000254999|ENST00000530758|BRK1;;nc|ENSG00000254999|Q8WUW1-2|BRK1 9.862815856933594 3.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 4968 26.502 369.0 242070.0 25 0 15015.0 -1 0 116 592.3175049918092 591.3102285252091 1 592.3171264529228 MULTI CID FTMS 0 0 0 4962 207914.78125 0.4012342164867991 -31 1.2315292358398438 6 1 Y 1 -1 10.485 0.0 0.0 1.7731 0.0 0.0 410.2362671988404 0.0 410.2362671988404 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.7731 - 8 + 1 2.267 71153.7 1.0 1678 3288 4962 DOHH2_400M_050219_1,4968 DOHH2_400M_050219_1,4968, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4970 26.507 9.5 4955000.0 25 0 737130.0 + 6804 EEAPSRPAL 9 67 485.253388452074 968.492223970948 2 485.2534362673759 MULTI CID FTMS 0 0 0 4969 5620031.5 0.6961357313382014 2 -0.0574188232421875 1 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 22.736283301280096 0.2418982879461534 1 EEAPSR 6 3 42.708 0.0 0.0 4.4098 0.0 0.0 0.0 296.16144739322505 296.16144739322505 31.53811417556533 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + EEAPSR 4.4098 + + 33 + 1 2.267 45216.2 1.0 1679 3289 4969 DOHH2_400M_050219_1,4970 DOHH2_400M_050219_1,4970,EEAPSRPAL False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 4971 26.508 26.0 1925200.0 25 0 130150.0 + 24549 MLDHQPPQY 9 78 564.7602579408066 1127.505962948413 2 564.7604247927666 MULTI CID FTMS 0 0 0 4969 2274222.25 0.7599820816812343 -1 0.0485000610351562 2 Unmodified _MLDHQPPQY_ ENSG00000108604|ENST00000448276|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;nc|ENSG00000108604|Q92925-3|SMARCD2 69.10491478415734 0.0214449631113747 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]QPPQY 9 0 + 59.649 0.0 0.0 5.2903 5.2903 77.821 0.0 0.0 0.0 2.6567174039983144 3.8862122965370105 2.6567174039983144 2.6567174039983144 0 1.6861818737241734 1.6989700043360187 0.4247425010840047 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]QPPQY;{[HG]|PP}QSSQPPQY;[QP]P[NG]MPPQY;[HD]Q{I|L}MPPQY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}MSPQY;[HQ]D{I|L}MPPQY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]QPP[AG]Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD][AG]PPQY;{[HG]|PP}QSS[AG]PPQY;{[HG]|PP}[AG]SSQPPQY 5.2903;5.0547;4.9839;4.9234;4.8932;4.8266;4.4737;4.4737;4.2419;4.2419 +;-;-;-;-;-;-;-;-;- + 495 1 2.267 44612.4 1.0 1680 3289 4969 DOHH2_400M_050219_1,4971 DOHH2_400M_050219_1,4971,MLDHQPPQY True True MLDHQPPQY 26.508077 564.760424792767 51749748.0 4969.0 ENSG00000108604|ENST00000448276|SMARCD2;;nc|ENSG00000108604|Q92925-2|SMARCD2;;nc|ENSG00000108604|Q92925-3|SMARCD2 8.708623886108398 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4972 26.511 141.0 364030.0 25 0 19697.0 + 26596 NVPWTRTI 8 87 493.7725704280341 985.530587922868 2 493.7718994021416 MULTI CID FTMS 0 0 0 4969 433064.9375 0.0188212934304673 8 -0.3705615997314453 3 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 25.399314129420983 0.5099049743284904 1 {[NV]|[RG]}RNVGNT{I|L} 9 -1 + 55.57 0.0 0.0 5.6386 5.6386 86.687 0.0 0.0 0.0 4.137342758552691 40.08532514725495 4.137342758552691 9.208187539523747 0 0.8494850021680094 0.0 0.0 0.3252574989159953 {[NV]|[RG]}RNVGNT{I|L};{[NV]|[RG]}RNVGGGT{I|L};{[NV]|[RG]}RGGVGNT{I|L};{[NV]|[RG]}RNGVNT{I|L};{[NV]|[RG]}RGGVGGGT{I|L};{[NV]|[RG]}RNGVGGT{I|L};{[NV]|[RG]}RGGGVNT{I|L};{[NV]|[RG]}RNKNE{I|L};{[NV]|[RG]}RGGGVGGT{I|L};{[NV]|[RG]}R[KG]GNE{I|L} 5.6386;4.7042;4.7042;4.6703;3.7743;3.736;3.736;3.252;2.8061;2.7963 -;-;-;-;-;-;-;-;-;- 487 1 2.267 45082.8 1.0 1681 3289 4969 DOHH2_400M_050219_1,4972 DOHH2_400M_050219_1,4972,NVPWTRTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4973 26.525 800.0 168190.0 25 0 18863.0 + 2158 AQAASQHVF 9 139 479.7407741341037 957.4669953350076 2 479.7402526736259 MULTI CID FTMS 0 0 0 4969 96181.8515625 0.5659656745013445 -1 0.0485000610351562 4 Unmodified _AQAASQHVF_ ENSG00000077348|ENST00000221233|EXOSC5 27.628801355627647 0.1796483985696185 1 [QA]ASHV 6 3 42.421 0.0 0.0 4.4305 0.0 0.0 0.0 361.1517990294543 361.1517990294543 22.032531496696773 0.0 0.0 0.0 0 1.0 0.721246399047171 0.3054621874040891 0.6747425010840047 [QA]ASHV 4.4305 - 464 1 2.267 105646.9 0.4699999988079071 1682 3289 4969 DOHH2_400M_050219_1,4973 DOHH2_400M_050219_1,4973,AQAASQHVF False True AQAASQHVF 26.524731 479.740252673626 990748.25 4969.0 ENSG00000077348|ENST00000221233|EXOSC5 7.0424777666727705 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4974 26.527 132.0 414320.0 25 0 23151.0 -1 0 112 532.2978919855241 531.290615518924 1 532.2957641482353 MULTI CID FTMS 0 0 0 4969 341858.65625 0.6688857328962663 4 -0.2045097351074218 5 1 {[TV]|[{I|L}S]}{I|L}{[CP]|[EA]} 5 -1 + 16.72 0.0 0.0 3.1471 3.1471 81.519 0.0 0.0 0.0 5.751349721325951 0.2802872360024366 0.2802872360024366 16.720449851406514 0 0.3252574989159953 0.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}{I|L}{[CP]|[EA]} 3.1471 - 44 1 2.267 46111.3 1.0 1683 3289 4969 DOHH2_400M_050219_1,4974 DOHH2_400M_050219_1,4974, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4975 26.541 800.0 139900.0 25 0 5294.0 + -1 DCYFHRWAF 9 151 651.2786045275172 1300.5426561218344 2 651.2780639529228 MULTI CID FTMS 0 0 0 4969 143925.796875 1.0 0 0.0 6 Carbamidomethyl (C) _DC(Carbamidomethyl (C))YFHRWAF_ REV__ENST00000468490.1_1_5:50571220-50571544:+|nuORF 15.847184025352805 0.4077185912009129 1 [AG]NHDEAQAGNA{M(Oxidation (M))|F} 13 -1 + 118.71 0.0 0.0 9.1275 9.1275 85.513 0.0 0.0 0.0 1.9188552623891293 16.642078980768076 1.9188552623891293 1.9188552623891293 0 0.9247425010840048 2.0 0.3494850021680094 2.2981974498829643 [AG]NHDEAQAGNA{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQAGNA{M(Oxidation (M))|F};[AG]NHDEAQQNA{M(Oxidation (M))|F};[AG]GGHDEAQAGNA{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQQNA{M(Oxidation (M))|F};[AG]NHDEAQAGGGA{M(Oxidation (M))|F};[AG]NHDEA[AG]AGNA{M(Oxidation (M))|F};{[QG]|[NA]}GHDEA[AG]AGNA{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQAGGGA{M(Oxidation (M))|F};[AG]GGHDEAQQNA{M(Oxidation (M))|F} 9.1275;8.9799;8.6168;8.5537;8.4692;8.4299;8.4299;8.2824;8.2824;8.041 -;-;-;-;-;-;-;-;-;- 8746 1 2.267 86763.6 0.6600000262260437 1684 3289 4969 DOHH2_400M_050219_1,4975 DOHH2_400M_050219_1,4975,DCYFHRWAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4977 26.546 94.0 492410.0 25 0 49592.0 32693 SEAAAPRAF 9 82 460.23361232059176 918.4526717079837 2 460.2309448122978 MULTI CID FTMS 0 0 0 4976 499601.3125 0.4759720943515022 -4 0.1848659515380859 1 Unmodified _SEAAAPRAF_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 10.823927491677226 0.5436922275383211 1 [MN]PSK 5 8 31.655 0.0 0.0 3.4466 0.0 0.0 0.0 358.1611422174438 358.1611422174438 21.05953044989464 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 [MN]PSK 3.4466 - 64 + 1 2.267 41235.3 1.0 1685 3290 4976 DOHH2_400M_050219_1,4977 DOHH2_400M_050219_1,4977,SEAAAPRAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4978 26.56 800.0 148930.0 25 0 47274.0 -1 TCECVFPPAYT 11 124 644.2724522562536 1286.530351579307 2 644.2735473513603 MULTI CID FTMS 0 0 0 4976 53367.70703125 0.2701519488083848 6 -0.3054389953613281 2 Carbamidomethyl (C) _TC(Carbamidomethyl (C))ECVFPPAYT_ ENST00000599420.5_1_19:17312953-17313848:+|nuORF 12.240655878213236 0.7805268987462184 1 {[{M(Oxidation (M))|F}C]|[YS]}DN{[HG]|PP}YPATY 11 -1 {[{M(Oxidation (M))|F}C]|[YS]}DN{[HG]|PP}Y + + 33.052 -10.928 -1.3067 2.5691 2.5691 49.609 0.0 0.0 0.0 0.0 18.14877582166263 0.0 0.0 0 1.0 0.0 0.7134679910804405 0.0 {[{M(Oxidation (M))|F}C]|[YS]}DN{[HG]|PP}YPATY 2.5691 - 437 + 1 2.267 91093.3 0.5899999737739563 1686 3290 4976 DOHH2_400M_050219_1,4978 DOHH2_400M_050219_1,4978,TCECVFPPAYT False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 4980 26.564 55.0 882100.0 25 0 145420.0 + 31342 RMSDKVDQ 8 69 489.73524776239327 977.4559425915866 2 489.7351867556572 MULTI CID FTMS 0 0 0 4979 807649.1875 0.4223954471828323 3 -0.1814804077148437 1 Unmodified _RMSDKVDQ_ REV__ENSG00000141748|ENST00000269586|ARL5C 16.149105407346934 0.6723412507259107 1 {[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q 8 -1 + 42.44 0.0 0.0 4.3419 4.3419 73.476 0.0 0.0 0.0 27.74735947860492 5.897803053245951 5.897803053245951 1.7609125905568137 0 0.9247425010840048 0.0 0.0 0.3807196863200844 {[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}D[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}SWRDQ;{[WT]|[RM]}SD[QT]{I|L}Q;{[CA]|SS}S{I|L}W[RD]Q;{[WT]|[RM]}DS[QT]{I|L}Q;{[CA]|SS}{I|L}SD[WR]Q;{[CA]|SS}D{I|L}S[WR]Q;{[CA]|SS}S{I|L}D[WR]Q;{[CA]|SS}{I|L}DS[WR]Q 4.3419;4.1617;4.1024;3.9816;3.7259;3.6736;3.4701;3.3422;3.3422;3.1621 -;-;-;-;-;-;-;-;-;- 188 + 1 2.267 44927.0 1.0 1687 3291 4979 DOHH2_400M_050219_1,4980 DOHH2_400M_050219_1,4980,RMSDKVDQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4981 26.578 800.0 107890.0 25 0 7845.5 -1 SSEVDWCEDNY 11 118 702.2582001756602 1402.5018474181204 2 702.2578613162041 MULTI CID FTMS 0 0 0 4979 102408.71875 0.4406213215914235 -3 0.1059188842773437 2 Carbamidomethyl (C) _SSEVDWC(Carbamidomethyl (C))EDNY_ ENSG00000177076|ENST00000340967|ACER2 9.38312468134398 0.8308777417566128 1 [QP]TY[{I|L}V]G 7 -1 28.343 0.0 0.0 2.0209 0.0 0.0 0.0 641.0753086820454 641.0753086820454 6.176287695008192 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.5994850021680094 0.5649093276264391 [QP]TY[{I|L}V]G 2.0209 - 524 1 2.267 67106.3 0.6200000047683716 1688 3291 4979 DOHH2_400M_050219_1,4981 DOHH2_400M_050219_1,4981,SSEVDWCEDNY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4982 26.592 800.0 93651.0 25 0 7505.6 + 831 AETDTPNRATF 11 108 611.7879331443563 1221.5613133555123 2 611.7886840701103 MULTI CID FTMS 0 0 0 4979 105577.6640625 0.995678571097021 -1 0.0184593200683593 3 Unmodified _AETDTPNRATF_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 34.221707139014875 0.3014076866608453 1 {[CP]|[EA]}TDT 5 6 37.263 0.0 0.0 3.0504 0.0 0.0 0.0 701.3383176764564 701.3383176764564 19.382732379398263 0.0 0.0 0.0 0 1.079689690656103 0.0 0.4247425010840047 0.0 + {[CP]|[EA]}TDT 3.0504 + + 159 + 1 2.267 60772.3 0.5699999928474426 1689 3291 4979 DOHH2_400M_050219_1,4982 DOHH2_400M_050219_1,4982,AETDTPNRATF False True AETDTPNRATF 26.591983 611.78868407011 1171592.875 4979.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 6.975688457489014 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4983 26.603 660.0 173610.0 25 0 27024.0 + 31832 RTDTGEITSY 10 123 571.7688054272849 1141.5230579213696 2 571.7690307497978 MULTI CID FTMS 0 0 0 4979 98984.40625 0.7367886909310238 -1 0.0184593200683593 4 Unmodified _RTDTGEITSY_ ENSG00000142599|ENST00000400908|RERE;ENST00000480342.5_1_1:8525723-8716473:-|nuORF 55.23464941255904 0.0494277333541689 1 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PTGE{I|L}TSY 10 3 + 52.388 0.0 0.0 4.5893 4.5893 73.406 0.0 0.0 0.0 1.168278513033627 1.168278513033627 1.168278513033627 1.168278513033627 0 0.8494850021680094 0.0 1.1989700043360187 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PTGE{I|L}TSY;[HM]T{I|L}E[YV]SY;[HM]E{I|L}[YV]TSY;{[ES]|[DT]|[{I|L}C]}RTGE{I|L}TSY;{[MG]|[TS]}{[RE]|[WV]}GE{I|L}TSY;[HM]T[YV]{I|L}ESY;[HM][YV]E{I|L}TSY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PTGT{I|L}ESY;[HM]E{I|L}T[YV]SY;[HM]T[YV]{I|L}TDY 4.5893;4.487;4.3317;4.2808;4.1323;3.8663;3.7814;3.7557;3.6534;3.5143 -;-;-;-;-;-;-;-;-;- 1115 1 2.267 90974.5 1.0 1690 3291 4979 DOHH2_400M_050219_1,4983 DOHH2_400M_050219_1,4983,RTDTGEITSY True True RTDTGEITSY 26.603485 571.769030749798 699067.3125 4979.0 ENST00000480342.5_1_1:8525723-8716473:-|nuORF;;ENSG00000142599|ENST00000400908|RERE 6.087591330210368 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4984 26.617 800.0 107790.0 25 0 4642.5 + 5393 DLKRQNAVL 9 138 528.8111084591476 1055.607663985095 2 528.8115722537041 MULTI CID FTMS 0 0 0 4979 93170.15625 0.9222067951176114 1 -0.0759239196777343 5 Unmodified _DLKRQNAVL_ ENSG00000029725|ENST00000537505|RABEP1;ENST00000575475.2_1_17:5185712-5281605:+|nuORF;nc|ENSG00000029725|Q15276-2|RABEP1 41.8396318013385 0.0653578398400075 1 {I|L}D 2 8 40.758 0.0 0.0 3.8611 0.0 0.0 0.0 824.4758438966804 824.4758438966804 23.87930374770852 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {I|L}D 3.8611 - 189 + 1 2.267 72158.5 0.9900000095367432 1691 3291 4979 DOHH2_400M_050219_1,4984 DOHH2_400M_050219_1,4984,DLKRQNAVL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4985 26.622 236.0 476650.0 25 0 65367.0 + 32907 SEIPQTERM 9 105 545.7638239334532 1089.5130949337065 2 545.7631713747978 MULTI CID FTMS 0 0 0 4979 126951.25 0.2570021385424255 -2 0.0574188232421875 6 Unmodified _SEIPQTERM_ ENSG00000205323|ENST00000336133|SARNP;ENST00000552207.1_1_12:56188062-56211500:-|nuORF 29.84058131909904 0.1515068451768857 1 {[ES]|[DT]|[{I|L}C]}{I|L}PQT 6 3 41.669 0.0 0.0 3.8245 0.0 0.0 0.0 431.16953455142817 431.16953455142817 30.248966786381448 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.75 + {[ES]|[DT]|[{I|L}C]}{I|L}PQT 3.8245 + + 231 + 1 2.267 88334.7 1.0 1692 3291 4979 DOHH2_400M_050219_1,4985 DOHH2_400M_050219_1,4985,SEIPQTERM False True SEIPQTERM 26.621749 545.763171374798 3105806.5 4979.0 ENSG00000205323|ENST00000336133|SARNP;;ENST00000552207.1_1_12:56188062-56211500:-|nuORF 5.2189249992370605 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4986 26.636 800.0 122750.0 25 0 43319.0 + -1 GARQFSCCLFA 11 111 630.2862585772953 0 630.2847167849541 PEAK CID FTMS 0 0 0 4979 123713.1640625 0.9659740469680032 1 -0.0759239196777343 7 Carbamidomethyl (C) _GARQFSC(Carbamidomethyl (C))CLFA_ REV__nc|nan|Q8N9P6|C9orf163 2.9952420565917617 0.4761840153648598 1 P{M(Oxidation (M))|F} 2 -1 10.969 0.0 0.0 0.87156 0.0 0.0 385.12319705370345 626.3007163415556 1011.423913395259 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F} 0.87156 - 8 + 1 2.267 78865.2 0.6100000143051147 1693 3291 4979 DOHH2_400M_050219_1,4986 DOHH2_400M_050219_1,4986,GARQFSCCLFA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4988 26.653 800.0 37224.0 25 0 8083.2 -1 0 35 1190.491939541529 3568.453989224788 3 1190.827563464642 MULTI CID FTMS 0 0 0 4987 27207.005859375 0.1575362399283018 2 -0.1055564880371093 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 33315.2 0.3799999952316284 1694 3292 4987 DOHH2_400M_050219_1,4988 DOHH2_400M_050219_1,4988, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 4989 26.655 112.0 681050.0 25 0 69269.0 + 31753 RSDPGGGGLAY 11 73 525.2537681279684 1048.4929833227368 2 525.2541992068291 MULTI CID FTMS 0 0 0 4987 421509.65625 0.1414358704524082 -4 0.1818428039550781 2 Unmodified _RSDPGGGGLAY_ ENSG00000183496|ENST00000329713|MEX3B;ENST00000558133.1_1_15:82335503-82336997:-|nuORF 14.95716135407024 0.7240205813188479 1 TG{I|L}AY 5 7 45.573 0.0 0.0 4.3465 0.0 0.0 525.239061424025 0.0 525.239061424025 0.0 29.291746928241125 0.0 0.0 0 1.0 0.0 0.0 0.0 TG{I|L}AY 4.3465 - 35 1 2.267 65461.5 1.0 1695 3292 4987 DOHH2_400M_050219_1,4989 DOHH2_400M_050219_1,4989,RSDPGGGGLAY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4990 26.657 105.0 719650.0 25 0 73134.0 + 17536 KPMKRSLSF 9 78 365.211156800933 1092.611641002999 3 365.2109252810478 MULTI CID FTMS 0 0 0 4987 385074.71875 0.204124377607713 -3 0.1333427429199218 3 Unmodified _KPMKRSLSF_ REV__ENST00000311212.8_1_8:102213857-102217695:-|nuORF 18.1463463914782 0.3454829746528889 1 MPKKSR{I|L}S{M(Oxidation (M))|F} 9 -1 + 55.588 0.0 0.0 5.0877 5.0877 84.644 0.0 0.0 0.0 16.478174818886373 9.208187539523747 9.208187539523747 9.208187539523747 0 0.0 0.0 0.3807196863200844 0.0 MPKKSR{I|L}S{M(Oxidation (M))|F};MPKKSR{I|L}{M(Oxidation (M))|F}S;MPKK{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KA]{M(Oxidation (M))|F};MPK{M(Oxidation (M))|F}[KP][KA]{M(Oxidation (M))|F} 5.0877;4.2449;3.7452;3.1212 -;-;-;- 81 + 1 2.267 66794.1 1.0 1696 3292 4987 DOHH2_400M_050219_1,4990 DOHH2_400M_050219_1,4990,KPMKRSLSF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4991 26.659 102.0 500980.0 25 0 41227.0 + 6939 EEGLVNNKY 9 92 533.2641805516654 1064.5138081701307 2 533.2639648318291 MULTI CID FTMS 0 0 0 4987 343949.53125 0.8673976215411602 -2 0.0943832397460937 4 Unmodified _EEGLVNNKY_ ENSG00000134987|ENST00000513710|WDR36;nc|ENSG00000134987|Q8NI36|WDR36 64.23631603340823 0.0237365939569086 1 EEG{I|L}VNNKY 9 0 + 50.97 0.0 0.0 4.7881 4.7881 83.598 0.0 0.0 0.0 38.873949984654246 11.706962271689749 11.706962271689749 9.208187539523747 0 0.4929928190999391 1.6989700043360187 0.0 0.75 + + EEG{I|L}VNNKY;EEG{I|L}VNGGKY;EEG{I|L}VGGNKY;EE[R{I|L}]NNKY;EEG{I|L}[TP]EKY;EE[R{I|L}]NGGKY;EE[R{I|L}]GGNKY;[QP]N[TP]V{I|L}G[HC];[QP][TP]NV{I|L}G[HC];[QP]NV[TP]{I|L}G[HC] 4.7881;3.9231;3.9231;3.575;3.4066;2.7049;2.7049;1.4459;1.2966;1.0948 +;-;-;-;-;-;-;-;-;- + 170 + 1 2.267 44313.8 1.0 1697 3292 4987 DOHH2_400M_050219_1,4991 DOHH2_400M_050219_1,4991,EEGLVNNKY True True EEGLVNNKY 26.659491 533.263964831829 2780728.0 4987.0 nc|ENSG00000134987|Q8NI36|WDR36;;ENSG00000134987|ENST00000513710|WDR36 7.545024077097575 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4992 26.662 117.0 292680.0 25 0 54692.0 -1 NNSYHMHPAGI 11 59 419.521511143533 1255.542704030799 3 419.5214416384697 MULTI CID FTMS 0 0 0 4987 319689.90625 0.8773590747233295 -1 0.0759239196777343 5 Oxidation (M) _NNSYHM(Oxidation (M))HPAGI_ ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98 5.047519993296601 0.8513334072183365 1 {I|L} 1 -1 14.604 0.0 0.0 1.1632 0.0 0.0 1124.447716093102 0.0 1124.447716093102 0.0 10.6246936830415 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1632 + + 11 + 1 2.267 35187.9 1.0 1698 3292 4987 DOHH2_400M_050219_1,4992 DOHH2_400M_050219_1,4992,NNSYHMHPAGI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4993 26.667 257.0 442380.0 25 0 36403.0 + 8609 EVDSGRQIEY 10 119 598.2838300724429 1194.5531072116858 2 598.2830688357353 MULTI CID FTMS 0 0 0 4987 290487.65625 0.3431863429659722 -2 0.0943832397460937 6 Unmodified _EVDSGRQIEY_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF 80.6760300276096 0.0165137828474802 1 {NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}{I|L}EDVEY 10 5 + 52.154 0.0 0.0 4.366 4.366 72.447 0.0 0.0 0.0 5.962790416161781 14.146518864155126 5.962790416161781 1.020599913279625 0 0.7887254899964358 2.0 1.174742501084005 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}{I|L}EDVEY;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}{I|L}DD{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}SQQ{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}{I|L}DEVEY;{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}QQ{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}[QT]WQ{I|L}EY;{[TV]|[{I|L}S]}NN{I|L}EDVEY;{[TV]|[{I|L}S]}NN{I|L}DD{I|L}EY;{[TV]|[{I|L}S]}NNSQQ{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}{I|L}EDEVY 4.366;4.2805;4.1998;4.114;4.0524;3.9713;3.8668;3.7814;3.7007;3.6641 -;-;-;-;-;-;-;-;-;- 3029 1 2.267 88816.6 1.0 1699 3292 4987 DOHH2_400M_050219_1,4993 DOHH2_400M_050219_1,4993,EVDSGRQIEY True True EVDSGRQIEY 26.666699 598.283068835735 3860674.0 4987.0 ENST00000504788.5_1_5:126112928-126171953:+|nuORF;;chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;;ENSG00000113368|ENST00000261366|LMNB1 6.3359629313151045 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4994 26.681 800.0 131130.0 25 0 5120.2 + -1 TCIPGHCGNQI 11 135 628.7784045109967 1255.5422560887932 2 628.7794067263603 MULTI CID FTMS 0 0 0 4987 186587.5625 1.0 0 0.0 7 2 Carbamidomethyl (C) _TC(Carbamidomethyl (C))IPGHC(Carbamidomethyl (C))GNQI_ REV__ENSG00000162434|ENST00000342505|JAK1 26.268140514670165 0.4754186812857754 1 {I|L}DKDR{M(Oxidation (M))|F}E 7 -1 47.354 0.0 0.0 3.7716 0.0 0.0 0.0 349.0911043756469 349.0911043756469 27.616450310412265 0.0 0.0 0.0 0 1.339136830878453 0.0 0.0 1.416386562212267 {I|L}DKDR{M(Oxidation (M))|F}E 3.7716 - 603 + 1 2.267 81369.4 0.7699999809265137 1700 3292 4987 DOHH2_400M_050219_1,4994 DOHH2_400M_050219_1,4994,TCIPGHCGNQI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4995 26.687 372.0 379640.0 25 0 36396.0 + 5539 DMKPKHLL 8 131 491.281646740724 980.548740548248 2 491.2810546755791 MULTI CID FTMS 0 0 0 4987 164638.1875 0.4684216371056244 -2 0.0943832397460937 8 Unmodified _DMKPKHLL_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 41.8396318013385 0.2035142800366642 1 DMKPKH{I|L}{I|L} 8 0 + 66.444 0.0 0.0 6.7762 6.7762 94.803 0.0 0.0 0.0 38.84471752071845 14.011007396375136 14.011007396375136 31.72167511924052 0 1.385151878060192 1.6989700043360187 0.0 0.0 + + DMKPKH{I|L}{I|L};{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PKH{I|L}{I|L};{[RE]|[WV]}WKH{I|L}{I|L};[H{I|L}]KP{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L};[H{I|L}][Q{I|L}][MN]{I|L}{I|L};[KP]H{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L};[KP]GV{[MS]|[{M(Oxidation (M))|F}A]}H{I|L}{I|L};[H{I|L}]KPK[MD]{I|L};[H{I|L}]KP{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L};D[YV]K[KC]{I|L}{I|L} 6.7762;3.5411;2.7512;2.7369;2.2471;2.1867;2.0923;2.0501;1.7431;1.6762 +;-;-;-;-;-;-;-;-;- + 421 + 1 2.267 110296.0 1.0 1701 3292 4987 DOHH2_400M_050219_1,4995 DOHH2_400M_050219_1,4995,DMKPKHLL False True DMKPKHLL 26.68722 491.281054675579 1401514.75 4987.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 5.862971782684326 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4996 26.696 494.0 129280.0 25 0 4548.3 + -1 VSYPCAMEKL 10 118 607.2833678259453 1212.5521827186906 2 607.2834350466728 MULTI CID FTMS 0 0 0 4987 101122.8671875 1.0 0 0.0 9 Carbamidomethyl (C),Oxidation (M) _VSYPC(Carbamidomethyl (C))AM(Oxidation (M))EKL_ REV__ENSG00000171262|ENST00000397609|FAM98B;REV__ENST00000305752.4_1_15:38756353-38762648:+|nuORF;REV__nc|ENSG00000171262|Q52LJ0-1|FAM98B 7.608950283845883 0.6914406445242895 1 VSEDW{I|L}SSKY 10 -1 + 74.322 0.0 0.0 6.1294 6.1294 87.449 0.0 0.0 0.0 63.06265324907724 8.239087409443187 8.239087409443187 9.164539485499247 0 0.4247425010840047 1.3979400086720375 0.0 0.0 VSEDW{I|L}SSKY;VSED{[DA]|[EG]}{I|L}SSKY;VSEDWTVSKY;VSED[{I|L}A]DSSKY;VSEDW{I|L}S[Q{I|L}]H;VSE[W{I|L}]DSSKY;VSED{[DA]|[EG]}TVSKY;VSEDW{I|L}P[KC]H;VSEDW{I|L}P{[CP]|[EA]}[PA];VSEDW{[WT]|[RM]}KY 6.1294;5.3736;5.2705;5.0831;5.0243;4.5408;4.5147;4.4479;4.3669;4.2925 -;-;-;-;-;-;-;-;-;- 876 + 1 2.267 51455.0 1.0 1702 3292 4987 DOHH2_400M_050219_1,4996 DOHH2_400M_050219_1,4996,VSYPCAMEKL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 4997 26.707 635.0 151260.0 25 0 7954.8 + 10573 FVIKKHEL 8 119 507.3101486021951 1012.60574427119 2 507.3104736208916 MULTI CID FTMS 0 0 0 4987 115562.2109375 1.0 0 0.0 10 Unmodified _FVIKKHEL_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 30.63653989081413 0.3996269429323407 1 [VP][NS]KK{I|L}VE 9 6 + 35.416 0.0 0.0 3.4975 3.4975 73.546 0.0 0.0 0.0 3.756636139608855 5.691446804494909 3.756636139608855 3.756636139608855 0 0.3807196863200844 0.0 1.079689690656103 0.0 [VP][NS]KK{I|L}VE;[QP][TA]KK{I|L}VE;[TA][QP]KK{I|L}VE;[PG]A[TA]KK{I|L}VE;{M(Oxidation (M))|F}V{I|L}KK[QP]GP 3.4975;3.1265;3.061;2.3743;1.8924 -;-;-;-;- 186 1 2.267 79705.4 1.0 1703 3292 4987 DOHH2_400M_050219_1,4997 DOHH2_400M_050219_1,4997,FVIKKHEL False True FVIKKHEL 26.707012 507.310473620892 461988.40625 4987.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 2.088463286558787 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 4999 26.712 65.0 1205400.0 25 0 453720.0 28395 PSPHGLAG 8 74 368.19297938892703 734.3714058446541 2 368.1925842165947 MULTI CID FTMS 0 0 0 4998 555059.5 1.0 0 0.0 1 Unmodified _PSPHGLAG_ ENST00000300976.8_1_19:18780088-18780439:+|nuORF 9.347437153973935 0.7675937258251505 1 [RD]G{M(Oxidation (M))|F}{I|L}Q 6 7 + 35.718 0.0 0.0 4.8638 4.8638 86.296 0.0 0.0 0.0 6.478174818886373 23.45628641374038 6.478174818886373 13.7898501052333 0 0.7302046884880937 0.0 0.0 0.0 [RD]G{M(Oxidation (M))|F}{I|L}Q;{[WT]|[RM]}{[MG]|[TS]}{I|L}Q;{[CA]|SS}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}R 4.8638;2.986;1.2084 -;-;- 36 1 2.247 64680.4 1.0 1704 3293 4998 DOHH2_400M_050219_1,4999 DOHH2_400M_050219_1,4999,PSPHGLAG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5000 26.716 207.0 435880.0 25 0 42229.0 + -1 CRNIMCLEKMY 11 90 775.3370980160691 1548.6596430989382 2 775.3367797732353 MULTI CID FTMS 0 0 0 4998 551234.8125 0.103202446091735 -4 0.2045097351074218 2 2 Carbamidomethyl (C),2 Oxidation (M) _C(Carbamidomethyl (C))RNIM(Oxidation (M))C(Carbamidomethyl (C))LEKM(Oxidation (M))Y_ REV__ENST00000370766.7_1_X:134425468-134426389:-|nuORF 5.296884461304476 0.8501568894076437 1 DEAGAQNA{M(Oxidation (M))|F}YQ 11 -1 104.7 0.0 0.0 6.7607 0.0 0.0 336.15486342597814 0.0 336.15486342597814 0.0 84.64578177674618 0.0 0.0 0 1.5 0.0 0.6505149978319906 1.274227503252014 DEAGAQNA{M(Oxidation (M))|F}YQ 6.7607 - 6085 1 2.247 65913.5 1.0 1705 3293 4998 DOHH2_400M_050219_1,5000 DOHH2_400M_050219_1,5000,CRNIMCLEKMY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5001 26.73 800.0 184800.0 25 0 15780.0 + 33223 SFMDVSNPFYQ 11 127 675.7895648621532 1349.5645767911062 2 675.7892944216728 MULTI CID FTMS 0 0 0 4998 212576.28125 0.5940218830739976 -2 0.1470909118652343 3 Oxidation (M) _SFM(Oxidation (M))DVSNPFYQ_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 55.50274090549119 0.0873970505193986 1 [HD]EAQQNA{M(Oxidation (M))|F}YQ 11 7 + 111.32 0.0 0.0 8.2488 8.2488 91.641 0.0 0.0 0.0 4.981979378655865 79.38455314910969 4.981979378655865 9.128498242810991 0 1.863982988912431 0.0 0.9731975075880328 1.6989700043360187 [HD]EAQQNA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]NA{M(Oxidation (M))|F}YQ;[HD]EAQQGGA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QNA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QGGA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}YQ;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QNA{M(Oxidation (M))|F}YQ;[YE]{[ET]|[MV]}WNA{M(Oxidation (M))|F}YQ;[HD]TA{M(Oxidation (M))|F}HNA{M(Oxidation (M))|F}YQ 8.2488;7.5724;7.5724;7.5724;6.8982;6.8982;6.8982;6.3363;6.1331;5.9354 -;-;-;-;-;-;-;-;-;- 2281 1 2.247 108501.4 0.800000011920929 1706 3293 4998 DOHH2_400M_050219_1,5001 DOHH2_400M_050219_1,5001,SFMDVSNPFYQ True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5002 26.735 267.0 389190.0 25 0 29078.0 + 39718 VEIVFVFHS 9 118 359.529756385215 1075.567439755845 3 359.5294982790947 MULTI CID FTMS 0 0 0 4998 115231.453125 0.8475235939313244 -1 0.0711669921875 4 Unmodified _VEIVFVFHS_ REV__ENSG00000100365|ENST00000248899|NCF4;REV__nc|ENSG00000100365|Q15080-3|NCF4 7.910154910731844 0.6385446671287552 1 {[SA]|[TG]}E 3 -1 16.031 0.0 0.0 1.4904 0.0 0.0 0.0 785.4331068303169 785.4331068303169 5.546218740408907 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[SA]|[TG]}E 1.4904 - 54 1 2.247 90537.0 1.0 1707 3293 4998 DOHH2_400M_050219_1,5002 DOHH2_400M_050219_1,5002,VEIVFVFHS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5003 26.742 371.0 224890.0 25 0 14161.0 + 6971 EEIGTPRKF 9 107 538.7904194172787 1075.566285901357 2 538.7913696169853 MULTI CID FTMS 0 0 0 4998 104139.15625 0.615008599168744 -2 0.1470909118652343 5 Unmodified _EEIGTPRKF_ ENSG00000080839|ENST00000373664|RBL1;nc|ENSG00000080839|P28749-2|RBL1 29.081581746732265 0.1611639662936252 1 EE{I|L}GT 5 4 50.502 0.0 0.0 4.6954 0.0 0.0 0.0 543.306258854866 543.306258854866 37.40295303156586 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.805462187404089 0.0 + EE{I|L}GT 4.6954 + + 218 + 1 2.247 67390.4 1.0 1708 3293 4998 DOHH2_400M_050219_1,5003 DOHH2_400M_050219_1,5003,EEIGTPRKF False True EEIGTPRKF 26.741547 538.791369616985 1132080.875 4998.0 ENSG00000080839|ENST00000373664|RBL1;;nc|ENSG00000080839|P28749-2|RBL1 6.383699099222819 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5005 26.746 32.0 1663700.0 25 0 132490.0 + 34711 SPWVPCPAP 9 90 477.2293000107962 952.4440470883924 2 477.2295410037041 MULTI CID FTMS 0 0 0 5004 2002500.5 0.7567903969841768 -3 0.1814804077148437 1 Unmodified _SPWVPCPAP_ REV__ENST00000274811.8_1_5:175963981-175964065:-|nuORF 38.15118350030904 0.0856056900103839 1 SPAMPHNS{I|L} 9 -1 + 79.192 0.0 0.0 8.3146 8.3146 93.061 0.0 0.0 0.0 55.51488276626745 14.316791084161736 14.316791084161736 9.208187539523747 0 1.7134679910804405 2.0 0.6643943297944485 0.0 SPAMPHNS{I|L};SPAMPHGGS{I|L};[PS]AY[QT]{[WT]|[RM]};SP[YG]P[RN]Y;[PA]SY[QT]{[WT]|[RM]};[PA]AA[HC]P{[WT]|[RM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))R]P{[WT]|[RM]} 8.3146;7.3478;4.4753;3.3029;2.8963;0.4788;0.4436 -;-;-;-;-;-;- 524 + 1 2.247 48422.0 1.0 1709 3294 5004 DOHH2_400M_050219_1,5005 DOHH2_400M_050219_1,5005,SPWVPCPAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5006 26.747 56.0 958460.0 25 0 114670.0 + 26053 NMPKKPVL 8 76 463.7775952393441 925.5406375454884 2 463.7782775759697 MULTI CID FTMS 0 0 0 5004 1072045.125 0.4220358910275974 2 -0.105499267578125 2 Unmodified _NMPKKPVL_ ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2 26.34127834903884 0.4900704351052977 1 [MN][KP]K[VP]{I|L} 8 0 + 27.452 0.0 0.0 2.9661 2.9661 82.433 0.0 0.0 0.0 13.957509373371622 4.69273760456403 4.69273760456403 27.452359395051715 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + [MN][KP]K[VP]{I|L} 2.9661 + + 32 + 1 2.247 47564.7 1.0 1710 3294 5004 DOHH2_400M_050219_1,5006 DOHH2_400M_050219_1,5006,NMPKKPVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5008 26.751 79.0 747330.0 25 0 82417.0 + 28000 PMKRSLSFK 9 74 547.3129525396172 1092.6113521460345 2 547.3130370974541 MULTI CID FTMS 0 0 0 5007 682261.875 0.8942097648857408 1 -0.0998592376708984 1 Unmodified _PMKRSLSFK_ REV__ENST00000311212.8_1_8:102213857-102217695:-|nuORF 14.838274106304384 0.4350285940865338 1 MPKK 4 -1 65.477 0.0 0.0 5.9927 0.0 0.0 0.0 605.3077485458914 605.3077485458914 59.992822134202015 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.0 0.4247425010840047 MPKK 5.9927 - 29 + 1 2.247 50120.5 1.0 1711 3295 5007 DOHH2_400M_050219_1,5008 DOHH2_400M_050219_1,5008,PMKRSLSFK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5009 26.765 800.0 125630.0 25 0 10276.0 + 3486 CKECRKCFYQ 10 113 739.8185766062707 1477.6226002793412 2 739.8179199099541 MULTI CID FTMS 0 0 0 5007 146086.84375 1.0 0 0.0 2 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKC(Carbamidomethyl (C))FYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 45.69961567697781 0.105390671673896 1 [YE][C(Carbamidomethyl (C))K]QQNA{M(Oxidation (M))|F}YQ 11 7 + 98.413 0.0 0.0 6.6603 6.6603 80.432 0.0 0.0 0.0 1.1696980693702417 9.128498242810991 1.1696980693702417 1.1696980693702417 0 1.424742501084005 0.0 1.3684151806525389 2.9291746928241125 [YE][C(Carbamidomethyl (C))K]QQNA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}YQ;[HM][TP]NQQNA{M(Oxidation (M))|F}YQ;[AG]N[HS]NQQNA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]Q[AG]NA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QQGGA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K][AG]QNA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HS]NQQGGA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HS]GGQQNA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HS]N[AG]QNA{M(Oxidation (M))|F}YQ 6.6603;6.5811;6.2928;6.1358;6.0425;6.0425;6.0425;5.9654;5.9654;5.9654 -;-;-;-;-;-;-;-;-;- 2813 1 2.247 76027.6 0.7799999713897705 1712 3295 5007 DOHH2_400M_050219_1,5009 DOHH2_400M_050219_1,5009,CKECRKCFYQ True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5010 26.772 376.0 296690.0 25 0 23336.0 + 44980 YPRPRDTSF 9 130 380.1924510336426 1137.555523701128 3 380.1924621462822 MULTI CID FTMS 0 0 0 5007 221187.28125 0.7792824076877529 -1 0.0056400299072265 3 Unmodified _YPRPRDTSF_ ENSG00000137288|ENST00000607484|UQCC2 15.248480904072842 0.4239247793462406 1 TS{M(Oxidation (M))|F} 3 6 23.02 0.0 0.0 2.0237 0.0 0.0 784.399703514863 0.0 784.399703514863 0.0 2.05136871872881 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 + TS{M(Oxidation (M))|F} 2.0237 + + 42 1 2.247 90249.5 1.0 1713 3295 5007 DOHH2_400M_050219_1,5010 DOHH2_400M_050219_1,5010,YPRPRDTSF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5011 26.777 240.0 343560.0 25 0 21238.0 + 42394 VTDSIRDEY 9 108 549.2581647340445 1096.501776534889 2 549.2594482302666 MULTI CID FTMS 0 0 0 5007 174284.015625 1.0 0 0.0 4 Unmodified _VTDSIRDEY_ ENSG00000087470|ENST00000549701|DNM1L;ENST00000547548.1_1_12:32866256-32875568:+|nuORF;nc|ENSG00000087470|O00429-2|DNM1L;nc|ENSG00000087470|O00429-3|DNM1L;nc|ENSG00000087470|O00429-4|DNM1L;nc|ENSG00000087470|O00429-5|DNM1L;nc|ENSG00000087470|O00429-6|DNM1L;nc|ENSG00000087470|O00429-7|DNM1L;nc|ENSG00000087470|O00429-8|DNM1L;nc|ENSG00000087470|O00429-9|DNM1L 31.26834338654808 0.1333407332142048 1 VTDS{I|L} 5 4 59.751 0.0 0.0 5.4492 0.0 0.0 0.0 578.2239473932249 578.2239473932249 28.60152539158022 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.75 0.0 + VTDS{I|L} 5.4492 + + 101 + 1 2.247 69984.3 1.0 1714 3295 5007 DOHH2_400M_050219_1,5011 DOHH2_400M_050219_1,5011,VTDSIRDEY False True VTDSIRDEY 26.776528 549.2607 967236.5625 5007.0 nc|ENSG00000087470|O00429-5|DNM1L;;nc|ENSG00000087470|O00429-6|DNM1L;;nc|ENSG00000087470|O00429-9|DNM1L;;nc|ENSG00000087470|O00429-4|DNM1L;;ENSG00000087470|ENST00000549701|DNM1L;;nc|ENSG00000087470|O00429-3|DNM1L;;nc|ENSG00000087470|O00429-7|DNM1L;;nc|ENSG00000087470|O00429-8|DNM1L;;nc|ENSG00000087470|O00429-2|DNM1L;;ENST00000547548.1_1_12:32866256-32875568:+|nuORF 3.933513243993124 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5012 26.79 800.0 208570.0 25 0 39683.0 + 15760 ISDIGGHAY 9 146 466.7268992097458 931.4392454862916 2 466.7271911501884 MULTI CID FTMS 0 0 0 5007 118633.328125 0.3078517027723684 -2 0.0400295257568359 5 Unmodified _ISDIGGHAY_ nc|ENSG00000111203|Q969R8-2|ITFG2 74.39630413441286 0.0193995060682538 1 {I|L}SD{I|L}N[HA]Y 8 2 + 67.74 0.0 0.0 7.2726 7.2726 85.365 0.0 0.0 0.0 19.49047301533064 3.853508813640176 3.853508813640176 3.521825181113627 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {I|L}SD{I|L}N[HA]Y;{I|L}SD{I|L}GG[HA]Y;{I|L}SD{I|L}N[HS]{M(Oxidation (M))|F};{I|L}SD{I|L}NEE{I|L};{I|L}SD{I|L}GG[HS]{M(Oxidation (M))|F};{I|L}SD{I|L}N{[{M(Oxidation (M))|F}H]|[RQ]}S;{I|L}SD{I|L}GGEE{I|L};{I|L}SD{I|L}G[HQ]Y;{I|L}SD{I|L}GG{[{M(Oxidation (M))|F}H]|[RQ]}S;{I|L}SD{I|L}G[YQ]H 7.2726;6.8945;6.8589;6.6791;6.4808;6.4544;6.3009;6.199;6.0763;5.3013 -;+;-;-;-;-;-;-;-;- + 1166 + 1 2.247 132275.7 0.6600000262260437 1715 3295 5007 DOHH2_400M_050219_1,5012 DOHH2_400M_050219_1,5012,ISDIGGHAY True True ISDIGGHAY 26.790344 466.727191150188 1702781.875 5007.0 nc|ENSG00000111203|Q969R8-2|ITFG2 2.6757133274028697 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 5013 26.804 800.0 105410.0 25 0 4841.4 + -1 PVLKNPDDPDTVD 13 109 712.8483386054901 1423.68212427778 2 712.8466064333916 MULTI CID FTMS 0 0 0 5007 95355.4921875 0.6694415305177617 -1 0.0056400299072265 6 Oxidation (M) _WFDPSWRKRM(Oxidation (M))_ Q5D862;ENSG00000143520|ENST00000388718|FLG2 13.042465956692816 0.6287021003332052 1 [VP]{I|L}KN[DP]D[DP]T[DV] 13 -1 + 77.383 0.0 0.0 5.4354 5.4354 77.434 0.0 0.0 0.0 19.063052633678065 36.39207467799253 19.063052633678065 1.7731749024395924 0 1.8098943791441968 2.0 0.8807196863200843 0.2742275032520141 [VP]{I|L}KN[DP]D[DP]T[DV];[VP]{I|L}KN[DP]D{[ES]|[DT]|[{I|L}C]}P[DV];[VP]{I|L}KNC(Carbamidomethyl (C)){[YC]|[HE]}{I|L}T[DV];[VP]{I|L}KYYD[DP]T[DV];[VP]{I|L}KYYD{[ES]|[DT]|[{I|L}C]}P[DV];[VP]{I|L}KN[CG]{[YC]|[HE]}{I|L}T[DV];[VP]{I|L}KGGC(Carbamidomethyl (C)){[YC]|[HE]}{I|L}T[DV];[VP][WY]H[DP]TVP[DV];[VP][WY][WY]TVP[DV];[VP]{I|L}K[YC(Carbamidomethyl (C))]{[C(Carbamidomethyl (C))G]|[NC]}{I|L}T[DV] 5.4354;5.3109;4.9631;4.7234;4.5988;4.324;4.324;3.3068;3.1776;3.0749 -;-;-;-;-;-;-;-;-;- 1716 1 2.247 65552.7 0.699999988079071 1716 3295 5007 DOHH2_400M_050219_1,5013 DOHH2_400M_050219_1,5013,WFDPSWRKRM False False PVLKNPDDPDTVD 26.804175 712.846606433392 1170662.125 5007.0 Q5D862;;ENSG00000143520|ENST00000388718|FLG2 8.815762519836426 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5014 26.818 800.0 197420.0 25 0 12848.0 + 44455 YMSGYHTGY 9 165 539.7186730479322 1077.4227931626642 2 539.7202636599541 MULTI CID FTMS 0 0 0 5007 129239.9296875 1.0 0 0.0 7 Unmodified _YMSGYHTGY_ ENSG00000172062|ENST00000380707|SMN1;ENSG00000205571|ENST00000380743|SMN2;ENST00000509805.5_1_5:69363243-69366626:+|nuORF;ENST00000518504.5_1_5:70238322-70242051:+|nuORF;nc|ENSG00000205571|Q16637-2|SMN1;nc|ENSG00000205571|Q16637-3|SMN1;nc|ENSG00000205571|Q16637-4|SMN1 42.09456458481378 0.0639583784996157 1 YMS 3 6 50.565 0.0 0.0 4.6931 0.0 0.0 0.0 693.2644137018186 693.2644137018186 15.42140792519588 0.0 0.0 0.0 0 0.4634679910804404 1.6989700043360187 0.9247425010840048 0.0 + YMS 4.6931 + + 856 + 1 2.247 121773.7 0.8100000023841858 1717 3295 5007 DOHH2_400M_050219_1,5014 DOHH2_400M_050219_1,5014,YMSGYHTGY True True YMSGYHTGY 26.818007 539.720263659954 723748.25 5007.0 ENSG00000205571|ENST00000380743|SMN2;;nc|ENSG00000205571|Q16637-2|SMN1;;nc|ENSG00000205571|Q16637-4|SMN1;;nc|ENSG00000205571|Q16637-3|SMN1;;ENSG00000172062|ENST00000380707|SMN1;;ENST00000518504.5_1_5:70238322-70242051:+|nuORF;;ENST00000509805.5_1_5:69363243-69366626:+|nuORF 6.849630514780681 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5015 26.832 800.0 180090.0 25 0 29805.0 + 31001 RLENSSSSDLQ 11 136 618.294490304767 0 618.2953979372978 PEAK CID FTMS 0 0 0 5007 125447.625 0.5226726441494619 -1 0.0056400299072265 8 Unmodified _RLENSSSSDLQ_ REV__ENSG00000164309|ENST00000446378|CMYA5 10.799506525563784 0.4428795054024277 1 S 1 -1 6.9897 0.0 0.0 0.56616 0.0 0.0 944.4969515179012 200.01947961978752 1144.5164311376889 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.56616 + + 13 + 1 2.247 109396.2 0.8299999833106995 1718 3295 5007 DOHH2_400M_050219_1,5015 DOHH2_400M_050219_1,5015,RLENSSSSDLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5016 26.847 800.0 161060.0 25 0 20122.0 -1 QSRRWTTY 8 127 570.2829417030845 1138.5513304729689 2 570.2874023318291 MULTI CID FTMS 0 0 0 5007 102585.4296875 0.6259067971498053 -12 0.4980545043945312 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))QSRRWTTY_ ENST00000503752.5_1_4:185580516-185580567:+|nuORF 9.347437153973935 0.7675937258251505 1 Y 1 -1 13.979 0.0 0.0 1.2278 0.0 0.0 957.4770029356628 0.0 957.4770029356628 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2278 + + 111 + 1 2.247 102414.3 0.7300000190734863 1719 3295 5007 DOHH2_400M_050219_1,5016 DOHH2_400M_050219_1,5016,QSRRWTTY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5018 26.852 87.0 463740.0 25 0 20029.0 + 24550 MLDHQPPQY 9 81 564.7602579408066 1127.505962948413 2 564.7606078982353 MULTI CID FTMS 0 0 0 5017 584731.3125 0.1954010080140365 6 -0.1826839447021484 1 Unmodified _MLDHQPPQY_ ENSG00000108604|ENST00000448276|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;nc|ENSG00000108604|Q92925-3|SMARCD2 34.40172386719151 0.1061884637610825 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]QPP[YQ] 9 0 + 35.708 0.0 0.0 3.167 3.167 68.399 0.0 0.0 0.0 0.5799194697768684 1.5790809655713005 0.5799194697768684 0.5799194697768684 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]QPP[YQ];[HD]Q{I|L}MPP[YQ];[HQ]D{I|L}MPP[YQ];[QP]P[NG]MPP[YQ];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}MSP[YQ];[QP]P{[CA]|SS}QPP[YQ];{[HG]|PP}Q[NG]MPP[YQ];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD][AG]PP[YQ];[HD][AG]{I|L}MPP[YQ];{[HG]|PP}Q{[CA]|SS}QPP[YQ] 3.167;3.1156;3.075;2.7221;2.6767;2.5659;2.4551;2.3503;2.2989;2.2989 +;-;-;-;-;-;-;-;-;- + 363 1 2.231 39733.1 1.0 1720 3296 5017 DOHH2_400M_050219_1,5018 DOHH2_400M_050219_1,5018,MLDHQPPQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5019 26.865 756.0 83899.0 25 0 4633.8 + -1 SDFSPCTWCPM 11 107 702.2582001756602 1402.5018474181204 2 702.2576782107353 MULTI CID FTMS 0 0 0 5017 64539.05078125 0.277684187407045 2 -0.0976638793945312 2 2 Carbamidomethyl (C),Oxidation (M) _SDFSPC(Carbamidomethyl (C))TWC(Carbamidomethyl (C))PM(Oxidation (M))_ REV__ENSG00000140022|ENST00000614646|STON2;REV__nc|ENSG00000140022|Q8WXE9-3|STON2;REV__nc|ENSG00000140022|Q8WXE9|STON2 3.2813086475875832 0.8596665074481906 1 {[DS]|[MA]|[CV]|TT}D{I|L} 4 -1 18.148 0.0 0.0 1.294 0.0 0.0 0.0 969.3072422757954 969.3072422757954 -0.32104226921453 0.0 -0.32104226921453 0.0 0 0.4247425010840047 0.0 0.8494850021680094 0.0 {[DS]|[MA]|[CV]|TT}D{I|L} 1.294 - 264 1 2.231 50993.1 1.0 1721 3296 5017 DOHH2_400M_050219_1,5019 DOHH2_400M_050219_1,5019,SDFSPCTWCPM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5020 26.867 16.0 2020000.0 25 0 244430.0 + 7327 EEYRGGNNW 9 58 562.7412749371325 1123.467996941065 2 562.7414428591728 MULTI CID FTMS 0 0 0 5017 2855400.5 0.825866412645929 -1 0.0998592376708984 3 Unmodified _EEYRGGNNW_ ENST00000358746.6_1_5:94886290-94886347:-|nuORF 34.10243960390752 0.1078313939113124 1 NW 2 7 23.756 0.0 0.0 2.1145 0.0 0.0 805.33696181465 0.0 805.33696181465 0.0 18.2711470149615 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3494850021680094 + NW 2.1145 + + 15 1 2.231 32000.4 1.0 1722 3296 5017 DOHH2_400M_050219_1,5020 DOHH2_400M_050219_1,5020,EEYRGGNNW True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5021 26.871 215.0 416930.0 25 0 39834.0 + 16335 IYIDMDGY 8 107 495.2196058354496 988.4246587376992 2 495.2188903689384 MULTI CID FTMS 0 0 0 5017 368615.28125 0.8725859925986541 -1 0.0998592376708984 4 Unmodified _IYIDMDGY_ REV__ENSG00000134962|ENST00000257408|KLB 34.18733598223924 0.3315367612694167 1 GS{M(Oxidation (M))|F}SGY 6 -1 57.925 0.0 0.0 5.8603 0.0 0.0 372.17702958465946 0.0 372.17702958465946 0.0 44.25250945692483 0.0 0.0 0 1.424742501084005 0.0 1.031234684152075 0.0 GS{M(Oxidation (M))|F}SGY 5.8603 - 432 1 2.231 73964.3 1.0 1723 3296 5017 DOHH2_400M_050219_1,5021 DOHH2_400M_050219_1,5021,IYIDMDGY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5022 26.873 129.0 605410.0 25 0 126540.0 -1 0 91 472.27517488286577 471.2678984162658 1 472.2736999392509 MULTI CID FTMS 0 0 0 5017 662596.25 0.0976619657920299 9 -0.2361068725585937 5 1 W 1 -1 11.259 0.0 0.0 2.3891 0.0 0.0 267.17997529790483 0.0 267.17997529790483 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.3891 - 19 + 1 2.231 64572.6 1.0 1724 3296 5017 DOHH2_400M_050219_1,5022 DOHH2_400M_050219_1,5022, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5024 26.878 143.0 322540.0 25 0 25980.0 + 7303 EEVKPPDR 8 84 485.253388452074 968.492223970948 2 485.2536193728447 MULTI CID FTMS 0 0 0 5023 132774.15625 0.0164463196271953 10 -0.2807636260986328 1 Unmodified _EEVKPPDR_ REV__ENSG00000248713|ENST00000511828|C4orf54 23.1484247019978 0.5573009939494978 1 EEAPS 5 -1 36.695 0.0 0.0 3.7888 0.0 0.0 0.0 452.2634676568969 452.2634676568969 22.424843744914607 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 EEAPS 3.7888 - 59 + 1 2.231 40813.9 1.0 1725 3297 5023 DOHH2_400M_050219_1,5024 DOHH2_400M_050219_1,5024,EEVKPPDR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5025 26.892 800.0 63186.0 25 0 6987.1 + 28804 PTDNPEAHSNLY 12 97 679.3046565014499 1356.5947600696998 2 679.3036376833916 MULTI CID FTMS 0 0 0 5023 68158.109375 0.4442423806668383 1 -0.0715007781982421 2 Unmodified _PYSEYYYPIY_ nc|ENSG00000168067|Q12851-2|MAP4K2;ENSG00000168067|ENST00000294066|MAP4K2 13.90604991867851 0.6142120002215601 1 [TP]DN[Y{I|L}][MN]N{I|L}Y 11 7 + 66.139 0.0 0.0 4.8753 4.8753 74.543 0.0 0.0 0.0 1.249387366082999 1.249387366082999 1.249387366082999 1.249387366082999 0 1.6237125054200234 1.6989700043360187 0.7742275032520141 1.0 [TP]DN[Y{I|L}][MN]N{I|L}Y;PTDN{[{M(Oxidation (M))|F}C]|[YS]}[R{I|L}]DNY;[TP]DYRA[MN]N{I|L}Y;[EP]SN[Y{I|L}][MN]N{I|L}Y;[TP]DYRA[MN]GG{I|L}Y;[EP]SYRA[MN]N{I|L}Y;[TP]DY{[DS]|[MA]|[CV]|TT}[RN]N{I|L}Y;[TP]DYRA[EP][{M(Oxidation (M))|F}V]Y;[EP]SYRA[MN]GG{I|L}Y;[EP]SY{[DS]|[MA]|[CV]|TT}[RN]N{I|L}Y 4.8753;4.7832;4.4899;4.1057;3.817;3.7203;3.7151;3.5515;3.0474;2.9454 -;-;-;-;-;-;-;-;-;- 437 1 2.231 40595.7 1.0 1726 3297 5023 DOHH2_400M_050219_1,5025 DOHH2_400M_050219_1,5025,PYSEYYYPIY False False PTDNPEAHSNLY 26.891912 679.303637683392 810498.9375 5023.0 nc|ENSG00000168067|Q12851-2|MAP4K2;;ENSG00000168067|ENST00000294066|MAP4K2 4.9945969581604 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5026 26.906 800.0 285530.0 25 0 34830.0 -1 0 165 422.1230150532989 842.2314771733978 2 422.1245910525322 MULTI CID FTMS 0 0 0 5023 153504.109375 0.5121100035383852 -7 0.3316020965576172 3 1 {I|L} 1 -1 10.379 0.0 0.0 1.2323 0.0 0.0 711.1362298362869 0.0 711.1362298362869 0.0 0.2899597348884342 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2323 - 31 + 1 2.231 174815.5 0.8600000143051147 1727 3297 5023 DOHH2_400M_050219_1,5026 DOHH2_400M_050219_1,5026, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5027 26.917 663.0 354650.0 25 0 29482.0 + 746 AEQMPQHTL 9 164 527.7526769917984 1053.4908010503966 2 527.7520019412041 MULTI CID FTMS 0 0 0 5023 228850.296875 0.5637846799841686 -1 0.026163101196289 4 Unmodified _AEQMPQHTL_ ENSG00000177200|ENST00000447540|CHD9;ENST00000562791.1_1_16:53256571-53257415:+|nuORF;nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9 89.40071534611396 0.0152361884002446 1 {[CP]|[EA]}QMPQHT{I|L} 9 0 + 52.996 0.0 0.0 5.0305 5.0305 84.471 0.0 0.0 0.0 3.65279269351241 9.370642574208231 3.65279269351241 9.208187539523747 0 1.1989700043360187 0.0 2.061604235276773 0.7059771852360797 + + {[CP]|[EA]}QMPQHT{I|L};{[CP]|[EA]}[AG]MPQHT{I|L};[AG]EH{I|L}SQ{I|L}{[CP]|[EA]};{[CP]|[EA]}GH{I|L}SQ{I|L}{[CP]|[EA]};{[CP]|[EA]}QMP[AG]HT{I|L};[AG]EH{I|L}S{I|L}Q{[CP]|[EA]};{[CP]|[EA]}GH{I|L}S{I|L}Q{[CP]|[EA]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H{I|L}SQ{I|L}{[CP]|[EA]};{[DA]|[EG]}AH{I|L}SQ{I|L}{[CP]|[EA]};[AG]P[HT]MQ{I|L}{[CP]|[EA]} 5.0305;4.1564;4.141;3.8944;3.8477;3.7863;3.5397;3.2514;3.2459;3.1837 +;-;-;-;-;-;-;-;-;- + 3866 + 1 2.231 180691.6 1.0 1728 3297 5023 DOHH2_400M_050219_1,5027 DOHH2_400M_050219_1,5027,AEQMPQHTL True True AEQMPQHTL 26.917271 527.752001941204 2221769.75 5023.0 ENST00000562791.1_1_16:53256571-53257415:+|nuORF;;ENSG00000177200|ENST00000447540|CHD9;;nc|ENSG00000177200|Q3L8U1-2|CHD9;;nc|ENSG00000177200|Q3L8U1-3|CHD9 8.562145233154297 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5028 26.931 800.0 283210.0 25 0 77574.0 + 13125 HEYLGRRSW 9 155 401.8729552303247 1202.5970362911742 3 401.8726379275322 MULTI CID FTMS 0 0 0 5023 215665.203125 1.0 0 0.0 5 Unmodified _HEYLGRRSW_ ENSG00000099991|ENST00000263119|CABIN1;nc|ENSG00000099991|Q9Y6J0-2|CABIN1 36.12702656103203 0.0967173616627612 1 HEGE 4 6 60.023 0.0 0.0 4.9911 0.0 0.0 0.0 747.3922686617183 747.3922686617183 28.96501926449765 0.0 0.0 0.0 0 0.6050541008457975 1.6989700043360187 0.805462187404089 0.0 HEGE 4.9911 - 369 + 1 2.231 174298.0 0.9800000190734864 1729 3297 5023 DOHH2_400M_050219_1,5028 DOHH2_400M_050219_1,5028,HEYLGRRSW True True HEYLGRRSW 26.931085 401.872637927532 913226.1875 5023.0 ENSG00000099991|ENST00000263119|CABIN1;;nc|ENSG00000099991|Q9Y6J0-2|CABIN1 4.762932538986206 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5029 26.945 788.0 226670.0 25 0 19429.0 + 36483 TADGKTYYY 9 171 541.2438967265786 1080.473240519957 2 541.2454101443291 MULTI CID FTMS 0 0 0 5023 131155.21875 0.7508932694421966 -1 0.026163101196289 6 Unmodified _TADGKTYYY_ ENSG00000113649|ENST00000679501|TCERG1;ENST00000507175.5_1_5:145826912-145859658:+|nuORF;ENST00000513298.5_1_5:145838810-145849312:+|nuORF;nc|ENSG00000113649|O14776-2|TCERG1;nc|ENSG00000113649|O14776|TCERG1 53.31671820480216 0.0330978755772958 1 [TA]QTYATYY 9 5 + 83.527 0.0 0.0 7.7306 7.7306 82.696 0.0 0.0 0.0 1.1079193716539208 1.1079193716539208 1.1079193716539208 1.1079193716539208 0 1.274227503252014 2.0 1.872363747448347 0.0 [TA]QTYATYY;TADGTAYTQGP;[TA]QTYATGD[PG];[TA]QTYAYTY;[TA]QTYYATY;[TA]QTAYTYY;TADGTYATQGP;TADGTYKYY;[TA][AG]TYATYY;[TA]DGKYYTY 7.7306;7.6281;7.3477;7.2679;7.2116;7.151;7.0485;7.0318;6.8784;6.8045 -;-;-;-;-;-;-;-;-;- 7818 1 2.231 140684.1 1.0 1730 3297 5023 DOHH2_400M_050219_1,5029 DOHH2_400M_050219_1,5029,TADGKTYYY True True TADGKTYYY 26.944718 541.245410144329 1202825.625 5023.0 ENST00000513298.5_1_5:145838810-145849312:+|nuORF;;ENST00000507175.5_1_5:145826912-145859658:+|nuORF;;nc|ENSG00000113649|O14776-2|TCERG1;;nc|ENSG00000113649|O14776|TCERG1;;ENSG00000113649|ENST00000679501|TCERG1 7.002219200134277 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5031 26.949 34.0 1051900.0 25 0 115410.0 + + 8092 RSDPGGGGLAY 11 45 525.2537681279684 1048.4929833227368 2 525.2541992068291 MULTI CID FTMS 0 0 0 5030 1054434.75 0.3538113409507863 2 -0.0645961761474609 1 Unmodified _EPFFYLAY_ ENSG00000183496|ENST00000329713|MEX3B;ENST00000558133.1_1_15:82335503-82336997:-|nuORF 13.50788311687929 0.7113601687236069 1 {I|L}AY 3 -1 36.198 0.0 0.0 3.4524 0.0 0.0 683.299649872112 0.0 683.299649872112 0.0 29.20818753952375 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}AY 3.4524 + + 11 1 2.204 36232.3 1.0 1731 3298 5030 DOHH2_400M_050219_1,5031 DOHH2_400M_050219_1,5031,EPFFYLAY False False RSDPGGGGLAY 26.94912 525.254199206829 35228724.0 5030.0 ENSG00000183496|ENST00000329713|MEX3B;;ENST00000558133.1_1_15:82335503-82336997:-|nuORF 7.149819374084473 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5032 26.951 109.0 606600.0 25 0 99995.0 + 17537 KPMKRSLSF 9 75 365.211156800933 1092.611641002999 3 365.2113830447197 MULTI CID FTMS 0 0 0 5030 424790.0 0.2251770634162942 3 -0.0751590728759765 2 Unmodified _KPMKRSLSF_ REV__ENST00000311212.8_1_8:102213857-102217695:-|nuORF 13.90604991867851 0.4602628045680013 1 MPKKP{M(Oxidation (M))|F}[KA]{M(Oxidation (M))|F} 9 -1 + 39.046 0.0 0.0 3.5737 3.5737 84.418 0.0 0.0 0.0 25.06675312145341 7.10795294801266 7.10795294801266 39.04615320817378 0 0.3182503180159344 0.0 0.0 0.0 MPKKP{M(Oxidation (M))|F}[KA]{M(Oxidation (M))|F} 3.5737 - 24 + 1 2.204 59670.8 1.0 1732 3298 5030 DOHH2_400M_050219_1,5032 DOHH2_400M_050219_1,5032,KPMKRSLSF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5033 26.955 161.0 639690.0 25 0 69947.0 8442 ESMDSDWGAWW 11 102 457.1761999610335 1368.5067704833004 3 457.1763793826103 MULTI CID FTMS 0 0 0 5030 521764.84375 0.5191609917956489 -3 0.1975231170654297 3 Unmodified _ESMDSDWGAWW_ ENST00000436771.1_1_8:104145257-104153519:-|nuORF;nc|ENSG00000236939|P0C853|BAALC-AS2 3.2813086475875832 0.8596665074481906 1 CGANHS{M(Oxidation (M))|F} 7 11 28.126 0.0 0.0 2.0552 0.0 0.0 634.2256419026025 0.0 634.2256419026025 0.0 17.944946282443304 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 CGANHS{M(Oxidation (M))|F} 2.0552 - 273 + 1 2.204 86883.3 1.0 1733 3298 5030 DOHH2_400M_050219_1,5033 DOHH2_400M_050219_1,5033,ESMDSDWGAWW False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_1 5034 26.958 183.0 298940.0 25 0 17665.0 + 37943 TMDNPTTTQY 10 102 586.2501433137928 1170.4857336943855 2 586.2500488162041 MULTI CID FTMS 0 0 0 5030 416264.40625 0.3506479971848046 -9 0.4420623779296875 4 Unmodified _TMDNPTTTQY_ ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF 24.99096001346401 0.4071966087057876 1 [MT]DN 4 6 25.891 0.0 0.0 2.212 0.0 0.0 0.0 706.303457653623 706.303457653623 4.5648562984455765 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + [MT]DN 2.212 + + 279 1 2.204 45475.4 1.0 1734 3298 5030 DOHH2_400M_050219_1,5034 DOHH2_400M_050219_1,5034,TMDNPTTTQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5035 26.968 554.0 288570.0 25 0 27740.0 + -1 ESCFKNCHTED 11 169 685.260570534149 1368.506588135098 2 685.2612182497978 MULTI CID FTMS 0 0 0 5030 396805.28125 0.6347113020755907 -2 0.0976638793945312 5 Carbamidomethyl (C) _ESC(Carbamidomethyl (C))FKNCHTED_ REV__ENSG00000123384|ENST00000243077|LRP1 19.361941925380144 0.6323962752489956 1 ESEC[VS]CGANHS{M(Oxidation (M))|F} 13 -1 + 91.541 0.0 0.0 6.6891 6.6891 79.921 0.0 0.0 0.0 62.85492760784456 13.147228959087984 13.147228959087984 0.6214790674884512 0 0.7302046884880938 1.6989700043360187 1.661954370472159 0.4247425010840047 ESEC[VS]CGANHS{M(Oxidation (M))|F};ESEC[VS]CQNHS{M(Oxidation (M))|F};ES{I|L}E[SG][C(Carbamidomethyl (C))C]NHS{M(Oxidation (M))|F};ESE{I|L}[SG][C(Carbamidomethyl (C))C]NHS{M(Oxidation (M))|F};ESR{[{M(Oxidation (M))|F}D]|MM}CGANHS{M(Oxidation (M))|F};ESR{[{M(Oxidation (M))|F}D]|MM}CQNHS{M(Oxidation (M))|F};ESEC[VS]CQGGHS{M(Oxidation (M))|F};ESGV{[{M(Oxidation (M))|F}D]|MM}CGANHS{M(Oxidation (M))|F};ESGV{[{M(Oxidation (M))|F}D]|MM}CQNHS{M(Oxidation (M))|F};ES{I|L}E[SG][C(Carbamidomethyl (C))C]NHAY 6.6891;6.6437;6.4349;6.2821;6.0574;6.0142;5.9789;5.8454;5.8;5.7238 -;-;-;-;-;-;-;-;-;- 6195 + 1 2.204 116983.6 1.0 1735 3298 5030 DOHH2_400M_050219_1,5035 DOHH2_400M_050219_1,5035,ESCFKNCHTED False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5036 26.971 142.0 384530.0 25 0 44988.0 + 36894 TEQPPPRSW 9 82 549.2725246039536 1096.530496274707 2 549.2745239138603 MULTI CID FTMS 0 0 0 5030 259130.921875 0.6437907367679648 -11 0.5518035888671875 6 Unmodified _TEQPPPRSW_ ENSG00000113300|ENST00000261951|CNOT6 28.49450938151212 0.1686335738423394 1 {[ET]|[MV]}QPP[WR][PS] 9 2 + 34.401 0.0 0.0 3.1372 3.1372 70.186 0.0 0.0 0.0 0.0 0.0 0.0 1.8777208482459 0 0.9247425010840048 0.0 0.6803115997617928 0.4247425010840047 {[ET]|[MV]}QPP[WR][PS];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}PPPQ[DP];{[ET]|[MV]}[WK]PPQ[DP];{[ET]|[MV]}[AG]PP[WR][PS];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}PPP[AG][DP];{[ET]|[MV]}[WK]PP[AG][DP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}[YK]Q[DP];{[ET]|[MV]}[WK]P[HA][QT];{[DS]|[MA]|[CV]|TT}[WR]P[HA][QT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}PP[HA][QT] 3.1372;2.966;2.7913;2.2975;2.1302;1.9516;1.2093;0.95686;0.52805;0.35681 -;-;-;-;-;-;-;-;-;- 93 + 1 2.204 48365.4 1.0 1736 3298 5030 DOHH2_400M_050219_1,5036 DOHH2_400M_050219_1,5036,TEQPPPRSW False True TEQPPPRSW 26.970722 549.27452391386 31738815.0 5030.0 ENSG00000113300|ENST00000261951|CNOT6 8.730253219604492 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5037 26.976 295.0 366680.0 25 0 46226.0 + 36805 TEIEGTQKL 9 99 509.7744900226653 1017.5344271121304 2 509.7751037478447 MULTI CID FTMS 0 0 0 5030 241060.359375 0.1020453852269989 -8 0.4031028747558594 7 Unmodified _TEIEGTQKL_ ENSG00000120899|ENST00000346049|PTK2B;nc|ENSG00000120899|Q14289-2|PTK2B 78.7280429016045 0.0178249292250809 1 {[ET]|[MV]}{I|L}EGTQK{I|L} 9 0 + 60.256 0.0 0.0 5.9218 5.9218 87.757 0.0 0.0 0.0 34.56597769767858 10.985548885535016 10.985548885535016 9.208187539523747 0 1.0 0.0 1.4802046884880935 0.5891368308784531 + + {[ET]|[MV]}{I|L}EGTQK{I|L};{[ET]|[MV]}{I|L}EGT[AG]K{I|L};{[QN]|[E{I|L}]|[KN]}T[{I|L}A]{M(Oxidation (M))|F}{I|L}[DP];{[ET]|[MV]}{I|L}EK[KS][PS];{[ET]|[MV]}{I|L}[{I|L}A]{M(Oxidation (M))|F}{I|L}[DP];[{M(Oxidation (M))|F}T]{I|L}E[{I|L}A]{I|L}[DP];{[ET]|[MV]}{I|L}EG[KQ]T{I|L};{[QN]|[E{I|L}]|[KN]}T[{I|L}A]E{I|L}{[ET]|[MV]};[{I|L}T]E[{I|L}A]{M(Oxidation (M))|F}{I|L}[DP];{[ET]|[MV]}{I|L}EK{[QG]|[NA]}T{I|L} 5.9218;5.0168;4.5428;3.8471;3.7814;3.7118;3.6147;3.4904;3.3614;3.1181 +;-;-;-;-;-;-;-;-;- + 639 + 1 2.204 88326.2 1.0 1737 3298 5030 DOHH2_400M_050219_1,5037 DOHH2_400M_050219_1,5037,TEIEGTQKL True True TEIEGTQKL 26.976122 509.775103747845 23426504.0 5030.0 nc|ENSG00000120899|Q14289-2|PTK2B;;ENSG00000120899|ENST00000346049|PTK2B 7.7934214274088545 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5038 26.989 764.0 236200.0 25 0 18770.0 + 29300 QIKAHVASL 9 175 483.78988967195215 965.5652264107044 2 483.7891113162041 MULTI CID FTMS 0 0 0 5030 201381.71875 0.8055634777905221 -3 0.1975231170654297 8 Unmodified _QIKAHVASL_ ENSG00000149806|ENST00000529639|FAU 30.63653989081413 0.1413794767160703 1 [Q{I|L}]HKAKE{I|L} 8 5 + 32.85 0.0 0.0 3.4021 3.4021 77.285 0.0 0.0 0.0 4.613020510236872 4.498626783835185 4.498626783835185 8.403544478846747 0 0.5682503180159344 1.6989700043360187 0.0 1.0297966019298022 [Q{I|L}]HKAKE{I|L};[H{I|L}]GAKAKE{I|L};[H{I|L}]GKAAKE{I|L};[H{I|L}]QKAKE{I|L};[HV]AAKAKE{I|L};[HV]AKAAKE{I|L};{[VA]|[{I|L}G]}HAKAKE{I|L};{[VA]|[{I|L}G]}HKAAKE{I|L};[Q{I|L}]HKAVG[{I|L}T];[AG]{I|L}HKAKE{I|L} 3.4021;2.5318;2.3804;2.168;2.1207;1.9694;1.9664;1.815;1.5942;1.5816 -;-;-;-;-;-;-;-;-;- 483 1 2.204 136841.1 1.0 1738 3298 5030 DOHH2_400M_050219_1,5038 DOHH2_400M_050219_1,5038,QIKAHVASL False True QIKAHVASL 26.989341 483.789111316204 1825932.125 5030.0 ENSG00000149806|ENST00000529639|FAU 7.576733589172363 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5039 27.002 748.0 344680.0 25 0 23993.0 -1 LLACMENTDAF 11 160 650.781377782446 1299.548202631692 2 650.7812988162041 MULTI CID FTMS 0 0 0 5030 192463.09375 0.1575274608180169 -9 0.4420623779296875 9 Carbamidomethyl (C),Oxidation (M) _LLAC(Carbamidomethyl (C))M(Oxidation (M))ENTDAF_ ENSG00000132881|ENST00000375599|CPLANE2 20.41453444215458 0.6105011870913812 1 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F} 11 -1 + 97.84 0.0 0.0 7.5288 7.5288 81.601 0.0 0.0 0.0 0.4871948892108975 3.0546218740408904 0.4871948892108975 0.4871948892108975 0 0.8494850021680094 0.0 1.5911290632962718 1.8441876774005248 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQNA{M(Oxidation (M))|F};[HS][PG]DEAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQGGA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AQ[HD]QQNA{M(Oxidation (M))|F};[HS][PG]DEAQ[AG]NA{M(Oxidation (M))|F} 7.5288;7.4913;7.3558;6.8263;6.8263;6.8263;6.7912;6.7912;6.6675;6.6557 -;-;-;-;-;-;-;-;-;- 21687 1 2.204 189977.5 1.0 1739 3298 5030 DOHH2_400M_050219_1,5039 DOHH2_400M_050219_1,5039,LLACMENTDAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5040 27.004 43.0 1271700.0 25 0 312910.0 -1 0 72 492.3011211671187 491.2938447005187 1 492.3015014529228 MULTI CID FTMS 0 0 0 5030 1699207.125 0.9756672048259496 -3 0.1975231170654297 10 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.204 48147.7 1.0 1740 3298 5030 DOHH2_400M_050219_1,5040 DOHH2_400M_050219_1,5040, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5042 27.008 28.0 1225200.0 25 0 121450.0 -1 RAWDMRYYMNQ 11 51 775.3370980160691 1548.6596430989382 2 775.3369628787041 MULTI CID FTMS 0 0 0 5041 1668003.0 0.3122843220072432 2 -0.0162315368652343 1 Oxidation (M) _RAWDM(Oxidation (M))RYYMNQ_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF;ENST00000591149.5_1_19:2807001-2808381:+|nuORF 1.3295316138638542 0.8688751186870782 1 {M(Oxidation (M))|F}ANQQN{NN|[MP]|[D{I|L}]|[EV]}YQ 10 -1 63.691 0.0 0.0 4.1126 0.0 0.0 309.13682107190976 0.0 309.13682107190976 0.0 55.7319095436452 0.0 0.0 0 0.0 0.0 0.0 1.555462187404089 {M(Oxidation (M))|F}ANQQN{NN|[MP]|[D{I|L}]|[EV]}YQ 4.1126 - 373 + 1 2.204 30334.9 1.0 1741 3299 5041 DOHH2_400M_050219_1,5042 DOHH2_400M_050219_1,5042,RAWDMRYYMNQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5043 27.009 46.0 869520.0 25 0 71646.0 -1 SPAVQMAHP 9 68 477.2293000107962 952.4440470883924 2 477.2290527224541 MULTI CID FTMS 0 0 0 5041 950605.8125 0.3592555158999166 2 -0.0162315368652343 2 Oxidation (M) _SPAVQM(Oxidation (M))AHP_ ENST00000475696.5_1_2:220110217-220110445:+|nuORF 26.88365393820708 0.1891292719743517 1 SPAMP{[RE]|[WV]}D 8 -1 64.774 0.0 0.0 6.8008 0.0 0.0 0.0 66.03575311832265 66.03575311832265 53.80510344348764 0.0 0.0 0.0 0 0.5 2.0 0.0 1.066901560044258 SPAMP{[RE]|[WV]}D 6.8008 - 140 + 1 2.204 36663.9 1.0 1742 3299 5041 DOHH2_400M_050219_1,5043 DOHH2_400M_050219_1,5043,SPAVQMAHP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5045 27.014 46.0 1055300.0 25 0 95368.0 + 12351 GTDGGRYDVY 10 69 551.7441195642139 1101.4736861952276 2 551.7439453005791 MULTI CID FTMS 0 0 0 5044 1239406.75 0.9106958603572995 -1 0.0056686401367187 1 Unmodified _GTDGGRYDVY_ ENSG00000107651|ENST00000369075|SEC23IP;nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP 55.50274090549119 0.048383292844968 1 {[SA]|[TG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}VY 9 5 + 53.987 0.0 0.0 4.9014 4.9014 82.033 0.0 0.0 0.0 12.77188410237045 8.494850021680094 8.494850021680094 8.05462187404089 0 1.8494850021680087 1.5228787452803376 1.110924374808178 0.0 {[SA]|[TG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}VY;{[SA]|[TG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;{[SA]|[TG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y;{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{[SA]|[TG]}VY;{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}VY;{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DV{[SA]|[TG]}Y;{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VD{[SA]|[TG]}Y;{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y;{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WWY 4.9014;4.1701;3.8968;3.7418;3.1488;2.5774;2.4175;2.3041;2.1442;1.8294 -;-;-;-;-;-;-;-;-;- 125 1 2.204 46185.9 1.0 1743 3300 5044 DOHH2_400M_050219_1,5045 DOHH2_400M_050219_1,5045,GTDGGRYDVY True True GTDGGRYDVY 27.013557 551.743945300579 6403831.5 5044.0 nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP;;ENSG00000107651|ENST00000369075|SEC23IP 7.18687629699707 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5046 27.02 338.0 216940.0 25 0 10421.0 + 348 AEASALQQQQY 11 106 618.79562150451 1235.57669007582 2 618.7963134646416 MULTI CID FTMS 0 0 0 5044 230028.21875 0.9867474359778674 -4 0.1622600555419922 2 Unmodified _AEASALQQQQY_ ENSG00000167615|ENST00000326764|LENG8;nc|ENSG00000167615|Q96PV6-1|LENG8 51.629811660486645 0.1086041609037681 1 [AG]QQYAG 7 8 31.257 0.0 0.0 2.5297 0.0 0.0 0.0 557.2550097381824 557.2550097381824 2.059928106151624 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 1.2134679910804405 [AG]QQYAG 2.5297 - 2172 1 2.204 60189.0 1.0 1744 3300 5044 DOHH2_400M_050219_1,5046 DOHH2_400M_050219_1,5046,AEASALQQQQY True True AEASALQQQQY 27.019703 618.796313464642 1587984.125 5044.0 ENSG00000167615|ENST00000326764|LENG8;;nc|ENSG00000167615|Q96PV6-1|LENG8 5.728466192881267 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5048 27.028 245.0 323730.0 25 0 28506.0 + 8319 ERIMKAQAL 9 113 530.3020946157349 1058.5896362982696 2 530.3013793826103 MULTI CID FTMS 0 0 0 5047 302717.21875 1.0 0 0.0 1 Unmodified _ERIMKAQAL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000506915.1_1_4:190395906-190396341:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P 55.50274090549119 0.0285720310785888 1 {[RE]|[WV]}{I|L}MKAQA{I|L} 9 0 + 65.746 0.0 0.0 6.2107 6.2107 85.908 0.0 0.0 0.0 6.918402966525576 14.09256854528806 6.918402966525576 6.918402966525576 0 0.3807196863200844 0.0 0.8494850021680094 1.1382104921644451 + + {[RE]|[WV]}{I|L}MKAQA{I|L};[QA]AKMKAQA{I|L};{[RE]|[WV]}{I|L}MKA[AG]A{I|L};[QA]AKMKA[AG]A{I|L};{[WN]|[YH]}[KT]KAQA{I|L};{[WN]|[YH]}[KT]KA[AG]A{I|L};{[WN]|[YH]}[KT]K[RN]{I|L};[PG]N{I|L}[Y{I|L}][RN]{I|L} 6.2107;5.5571;5.3408;4.6914;3.528;2.6581;1.0021;0.26788 +;-;-;-;-;-;-;- + 216 1 2.184 61989.4 1.0 1745 3301 5047 DOHH2_400M_050219_1,5048 DOHH2_400M_050219_1,5048,ERIMKAQAL True False ERIMKAQAL 27.02779 530.30137938261 1508875.875 5047.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENST00000506915.1_1_4:190395906-190396341:+|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1;;nc|ENSG00000205100|Q58FG1|HSP90AA4P;;ENST00000378770.1_1_4:190394307-190396341:+|nuORF 5.527496178944905 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5049 27.03 77.0 667450.0 25 0 253600.0 + 28040 PPAAGPKD 8 74 376.7002459576256 0 376.7004272341728 PEAK CID FTMS 0 0 0 5047 180777.03125 0.8449848903389242 -2 0.0162315368652343 2 Unmodified _PPAAGPKD_ REV__ENSG00000184634|ENST00000374080|MED12;REV__nc|ENSG00000184634|Q93074-2|MED12;REV__nc|ENSG00000184634|Q93074-3|MED12 2.059750862983233 0.5930426321653702 1 {I|L} 1 -1 3.4949 0.0 0.0 0.46512 0.0 0.0 161.03524425724487 474.2443941705688 635.2796384278137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.46512 - 2 + 1 2.184 45920.0 1.0 1746 3301 5047 DOHH2_400M_050219_1,5049 DOHH2_400M_050219_1,5049,PPAAGPKD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5051 27.046 800.0 166090.0 25 0 10697.0 + 367 AEDENGKIVGY 11 161 597.78543716467 0 597.7848388552666 PEAK CID FTMS 0 0 0 5050 146025.515625 0.7259311854527185 -1 0.0098609924316406 1 Unmodified _AEDENGKIVGY_ ENSG00000102030|ENST00000464845|NAA10;ENST00000466877.5_1_X:153197755-153200402:-|nuORF;ENST00000478177.1_1_X:153199394-153200402:-|nuORF;ENST00000494813.5_1_X:153187159-153200402:-|nuORF;nc|ENSG00000102030|P41227-2|NAA10 67.08073823543168 0.0035231812143924 1 V{I|L}{M(Oxidation (M))|F} 3 10 18.288 0.0 0.0 1.5323 0.0 0.0 238.09716719867748 593.2433127076163 831.3404799062937 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 V{I|L}{M(Oxidation (M))|F} 1.5323 - 279 + 1 2.184 101034.1 0.699999988079071 1747 3302 5050 DOHH2_400M_050219_1,5051 DOHH2_400M_050219_1,5051,AEDENGKIVGY True True AEDENGKIVGY 27.04557 597.784838855267 1020000.0 5050.0 ENST00000478177.1_1_X:153199394-153200402:-|nuORF;;ENST00000494813.5_1_X:153187159-153200402:-|nuORF;;ENSG00000102030|ENST00000464845|NAA10;;ENST00000466877.5_1_X:153197755-153200402:-|nuORF;;nc|ENSG00000102030|P41227-2|NAA10 7.238990147908528 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5052 27.05 251.0 287050.0 25 0 16807.0 + -1 REMENYEKI 9 110 604.2975044978417 603.2902280312417 1 606.2910644412041 MULTI CID FTMS 0 0 0 5050 124839.84375 0.9471385326503924 -3 0.026092529296875 2 ENSG00000163634|ENST00000295899|THOC7;ENST00000487570.1_1_3:63824036-63825384:-|nuORF 1 H 1 -1 11.109 0.0 0.0 1.8414 0.0 0.0 448.22328574784166 0.0 448.22328574784166 0.0 -1.4536501951208436 -1.4536501951208436 0.0 0 0.0 0.0 0.0 0.0 H 1.8414 - 32 + 1 2.184 56638.4 1.0 1748 3302 5050 DOHH2_400M_050219_1,5052 DOHH2_400M_050219_1,5052, False False REMENYEKI 27.050259 606.2907 499800.28125 5050.0 ENSG00000163634|ENST00000295899|THOC7;;ENST00000487570.1_1_3:63824036-63825384:-|nuORF 1.8593258907397587 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5053 27.056 288.0 271340.0 25 0 17325.0 + 8209 YPRPRDTSF 9 101 380.1924510336426 1137.555523701128 3 380.1919738650322 MULTI CID FTMS 0 0 0 5050 126017.40625 0.4439818926209876 6 -0.1992206573486328 3 Unmodified _EPSTVSASTLF_ ENSG00000137288|ENST00000607484|UQCC2 18.1463463914782 0.6576820063886638 1 {M(Oxidation (M))|F} 1 10 17.474 0.0 0.0 1.5361 0.0 0.0 972.4759471403844 0.0 972.4759471403844 0.0 11.989700043360187 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.5361 + + 22 + 1 2.184 65651.1 1.0 1749 3302 5050 DOHH2_400M_050219_1,5053 DOHH2_400M_050219_1,5053,EPSTVSASTLF False False YPRPRDTSF 27.055559 380.191973865032 2649683.25 5050.0 ENSG00000137288|ENST00000607484|UQCC2 1.4503742853800456 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5056 27.064 40.0 945820.0 25 0 79769.0 29678 QPDFELHAI 9 71 535.2670612040412 1068.5195694748822 2 535.2673828005791 MULTI CID FTMS 0 0 0 5055 1216757.375 0.0558676070856271 -4 0.0504512786865234 1 Unmodified _QPDFELHAI_ ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4 25.399314129420983 0.2080152500878129 1 QDTRGTA{I|L} 8 5 60.585 0.0 0.0 5.67 0.0 0.0 208.0854511945328 0.0 208.0854511945328 0.0 55.10003799480572 0.0 0.0 0 2.718765315847925 0.0 0.5 0.3807196863200844 QDTRGTA{I|L} 5.67 - 284 1 2.184 33016.0 1.0 1750 3304 5055 DOHH2_400M_050219_1,5056 DOHH2_400M_050219_1,5056,QPDFELHAI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5057 27.069 275.0 338640.0 25 0 68451.0 -1 0 106 474.2893300330061 473.2820535664061 1 474.2885009646416 MULTI CID FTMS 0 0 0 5055 183760.5625 0.2294982068165791 -20 0.7645473480224609 2 1 {NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]} 4 -1 + 25.686 0.0 0.0 5.4273 5.4273 90.002 0.0 0.0 0.0 12.191512336730028 17.38560627359831 12.191512336730028 25.68636235841012 0 0.0 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]} 5.4273 - 22 1 2.184 78082.8 1.0 1751 3304 5055 DOHH2_400M_050219_1,5057 DOHH2_400M_050219_1,5057, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5058 27.083 800.0 160880.0 25 0 16808.0 + 43955 YGPACSCEY 9 149 496.6792381703901 991.3439234075802 2 496.6786682009697 MULTI CID FTMS 0 0 0 5055 118783.4765625 0.6098984861371036 1 -0.0233955383300781 3 Unmodified _YGPACSCEY_ REV__ENSG00000185559|ENST00000341267|DLK1;REV__nc|ENSG00000185559|P80370-2|DLK1 11.640296217721598 0.521594087909532 1 EY 2 -1 21.766 0.0 0.0 2.1956 0.0 0.0 681.2288681637924 0.0 681.2288681637924 0.0 11.387393466951004 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 EY 2.1956 + + 78 1 2.184 99593.2 0.7799999713897705 1752 3304 5055 DOHH2_400M_050219_1,5058 DOHH2_400M_050219_1,5058,YGPACSCEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5060 27.094 511.0 180270.0 25 0 21264.0 28978 QDLSSGVLSFS 11 127 570.2829417030845 1138.5513304729689 2 570.2810546755791 MULTI CID FTMS 0 0 0 5059 123871.5859375 0.755780502632673 -2 0.0273284912109375 1 Unmodified _QDLSSGVLSFS_ ENSG00000106009|ENST00000340611|BRAT1;ENST00000469750.5_1_7:2583168-2595320:-|nuORF;nc|ENSG00000106009|Q6PJG6-2|BRAT1 4.897010918128616 0.8520435188433833 1 Y 1 11 11.594 0.0 0.0 1.0183 0.0 0.0 957.4771402647642 0.0 957.4771402647642 0.0 0.1738105312960591 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0183 - 68 + 1 2.184 70903.8 1.0 1753 3305 5059 DOHH2_400M_050219_1,5060 DOHH2_400M_050219_1,5060,QDLSSGVLSFS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5061 27.095 5.7 8357500.0 25 0 2521200.0 -1 0 47 415.25402853597393 414.24675206937394 1 415.2538329958916 MULTI CID FTMS 0 0 0 5059 11549194.0 0.0984529280324509 9 -0.5690708160400391 2 1 A 1 -1 1.5938 0.0 0.0 0.38475 0.0 0.0 258.1199342976927 82.06698023013905 340.18691452783173 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.38475 - 2 + 1 2.184 46393.6 1.0 1754 3305 5059 DOHH2_400M_050219_1,5061 DOHH2_400M_050219_1,5061, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5062 27.109 800.0 123870.0 25 0 8207.8 + 11402 GGPGGFGPG 9 110 702.3213307294118 701.3140542628117 1 702.3211547732353 MULTI CID FTMS 0 0 0 5059 106289.6484375 0.5412622572051337 -3 0.0534229278564453 3 Unmodified _GGPGGFGPG_ CON__P35908;CON__P35908v2;CON__Q01546;ENSG00000172867|ENST00000309680|KRT2;ENSG00000185069|ENST00000332411|KRT76 79.93452657146344 0.0175326119056068 1 GGPGG{M(Oxidation (M))|F}GPG 9 0 + 49.575 0.0 0.0 7.0688 7.0688 80.975 0.0 0.0 0.0 35.96528504924979 0.2368003024914031 0.2368003024914031 0.7331603835508957 0 2.216190326687972 0.0 0.0 0.0 + + GGPGG{M(Oxidation (M))|F}GPG;[TA]GWGGPG;GPNG{M(Oxidation (M))|F}GPG;GGPN{M(Oxidation (M))|F}GPG;[TA]WNGPG;[TA]WGGGPG;[QT]WGGPG;[TA]GWNPG;[QT]WNPG;{[DS]|[MA]|[CV]|TT}RNGPG 7.0688;6.9643;6.8587;6.8518;6.5813;6.4986;6.4889;6.2204;5.7578;5.3029 +;-;-;-;-;-;-;-;-;- + 657 + 1 2.184 75079.6 0.6000000238418579 1755 3305 5059 DOHH2_400M_050219_1,5062 DOHH2_400M_050219_1,5062,GGPGGFGPG True True GGPGGFGPG 27.109176 702.321154773235 1388498.25 5059.0 Q01546;;ENSG00000172867|ENST00000309680|KRT2;;P35908;;P35908v2;;ENSG00000185069|ENST00000332411|KRT76 2.4620548089345298 1.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 5064 27.118 258.0 212550.0 25 0 32917.0 + 6501 EAIRERGY 8 95 497.2585050404186 0 497.2583801150322 PEAK CID FTMS 0 0 0 5063 94252.7421875 0.7620082603233514 7 -0.4915485382080078 1 Unmodified _EAIRERGY_ REV__ENSG00000196218|ENST00000359596|RYR1;REV__nc|ENSG00000196218|P21817-2|RYR1;REV__nc|ENSG00000196218|P21817-3|RYR1 10.183394434864962 0.5394990767616434 1 S 1 -1 8.8515 0.0 0.0 0.89184 0.0 0.0 496.25397695172046 406.18747888736567 902.441455839086 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 S 0.89184 - 25 + 1 2.169 46419.2 1.0 1756 3306 5063 DOHH2_400M_050219_1,5064 DOHH2_400M_050219_1,5064,EAIRERGY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5065 27.127 532.0 184240.0 25 0 14955.0 + 36803 TEIEDSHTL 9 133 522.7460812319251 1043.4776095306502 2 522.7472411990166 MULTI CID FTMS 0 0 0 5063 121895.375 0.5539246385109814 -2 0.0496501922607421 2 Unmodified _TEIEDSHTL_ ENSG00000136270|ENST00000258770|TBRG4;ENST00000488222.5_1_7:45142883-45145249:-|nuORF;nc|ENSG00000136270|Q969Z0-2|TBRG4 81.61307344734483 0.0171259190214613 1 {[ET]|[MV]}{I|L}EDSHT{I|L} 9 0 + 39.522 0.0 0.0 3.7875 3.7875 72.072 0.0 0.0 0.0 6.796831374325905 1.9968086511981933 1.9968086511981933 1.9968086511981933 0 0.7134679910804405 0.0 2.254432191740108 0.0 + + {[ET]|[MV]}{I|L}EDSHT{I|L};{[ET]|[MV]}{I|L}EDSH{I|L}T;{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}D[HV][PS];[PS][KG]SDE{I|L}[DP];[VS][RN]DE{I|L}[DP];{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}DSH[VP];{[TV]|[{I|L}S]}QQDE{I|L}[DP];{[QN]|[E{I|L}]|[KN]}D[DV]E{I|L}[DP];{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}D[YR]T;[VP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DE{I|L}[DP] 3.7875;3.5962;3.0644;2.9576;2.7826;2.7259;2.6912;2.5598;2.2022;2.149 +;-;-;-;-;-;-;-;-;- + 546 + 1 2.169 80302.4 1.0 1757 3306 5063 DOHH2_400M_050219_1,5065 DOHH2_400M_050219_1,5065,TEIEDSHTL True True TEIEDSHTL 27.126892 522.747241199017 1191701.0 5063.0 ENSG00000136270|ENST00000258770|TBRG4;;nc|ENSG00000136270|Q969Z0-2|TBRG4;;ENST00000488222.5_1_7:45142883-45145249:-|nuORF 6.166448752085368 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5066 27.128 3.6 17589000.0 25 0 3871400.0 + + 1367 LAAARLAAA 9 64 414.2587371651272 826.5029213970545 2 414.2587463259697 MULTI CID FTMS 0 0 0 5063 12958932.0 0.1639875938223009 -2 0.0496501922607421 3 Unmodified _ALAARALAA_ ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENSG00000167004|ENST00000300289|PDIA3;ENST00000469684.1_1_15:44038662-44048907:+|nuORF 57.47134341890925 0.0274820932774257 1 {I|L}AAA 4 -1 59.68 0.0 0.0 7.2208 0.0 0.0 0.0 497.2824495904906 497.2824495904906 27.03327897478887 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {I|L}AAA 7.2208 - 55 + 1 2.169 54240.5 1.0 1758 3306 5063 DOHH2_400M_050219_1,5066 DOHH2_400M_050219_1,5066,ALAARALAA False False LAAARLAAA 27.128071 414.25874632597 363621920.0 5063.0 ENST00000471856.1_1_1:146649692-146651075:+|nuORF;;ENSG00000167004|ENST00000300289|PDIA3;;ENST00000469684.1_1_15:44038662-44048907:+|nuORF 0.9357661108175912 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5067 27.133 290.0 246630.0 25 0 22042.0 814 AESWHTDSYFT 11 97 448.5247187648846 1342.552326894854 3 448.5242797732353 MULTI CID FTMS 0 0 0 5063 144423.703125 0.3513204891711952 -4 0.0796775817871093 4 Unmodified _AESWHTDSYFT_ ENSG00000188394|ENST00000616002|GPR21 8.745405648335112 0.8338865417133445 1 S{M(Oxidation (M))|F}TY 4 8 27.027 0.0 0.0 2.0131 0.0 0.0 826.3326746505164 0.0 826.3326746505164 0.0 16.057743964882718 0.0 0.0 0 0.0 0.0 0.6505149978319906 0.0 S{M(Oxidation (M))|F}TY 2.0131 - 77 + 1 2.169 62223.9 1.0 1759 3306 5063 DOHH2_400M_050219_1,5067 DOHH2_400M_050219_1,5067,AESWHTDSYFT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5068 27.137 197.0 305200.0 25 0 34843.0 + 8418 ESGHETRLY 9 95 546.257669925286 1090.500786917372 2 546.7599975466728 MULTI CID FTMS 0 0 0 5063 127921.3125 0.4423745095197662 -2 0.0496501922607421 5 Unmodified _ESGHETRLY_ REV__ENSG00000084674|ENST00000233242|APOB 11.640296217721598 0.521594087909532 1 {[VA]|[{I|L}G]}[YC(Carbamidomethyl (C))][R{M(Oxidation (M))|F}]{I|L}Y 8 -1 {[VA]|[{I|L}G]}[YC(Carbamidomethyl (C))][R{M(Oxidation (M))|F}]{I|L} + + 15.485 -9.1195 -1.0028 1.4199 1.4199 48.464 0.0 0.0 0.0 0.0 -3.098943791441968 -3.098943791441968 0.0 0 0.0 0.0 0.0 0.0 {[VA]|[{I|L}G]}[YC(Carbamidomethyl (C))][R{M(Oxidation (M))|F}]{I|L}Y 1.4199 - 66 + 1 2.169 50208.4 1.0 1760 3306 5063 DOHH2_400M_050219_1,5068 DOHH2_400M_050219_1,5068,ESGHETRLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5069 27.151 800.0 116760.0 25 0 5311.7 + 16693 KEQYQQQQQW 10 124 697.3292951010649 1392.6440372689297 2 697.3306152224541 MULTI CID FTMS 0 0 0 5063 85682.7265625 0.4346317186599915 -2 0.0496501922607421 6 Unmodified _KEQYQQQQQW_ ENSG00000138668|ENST00000313899|HNRNPD;ENST00000514325.1_1_4:83277919-83278597:-|nuORF;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD 140.63315402491853 0.0001363061203217 1 [AG]EKYQQQQQW 11 3 + 119.07 0.0 0.0 8.5499 8.5499 91.945 0.0 0.0 0.0 15.783960731301676 9.128498242810991 9.128498242810991 9.128498242810991 0 0.7742275032520141 1.6989700043360187 2.072682509756042 2.622363747448347 [AG]EKYQQQQQW;[AG]EKYQQQQ[AG]W;[AG]EKYQQ[AG]QQW;[AG]EKY[AG]QQQQW;[AG]EKYQQQ[AG]QW;[AG]EKYQ[AG]QQQW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KYQQQQQW;[AG]EKY[AG]QQ[AG]QW;[AG]EKYQQ[AG]Q[AG]W;[AG]EKY[AG]QQQ[AG]W 8.5499;7.8945;7.8945;7.8945;7.8945;7.8945;7.4166;7.2412;7.2412;7.2412 -;-;-;-;-;-;-;-;-;- 8447 1 2.169 72990.4 0.550000011920929 1761 3306 5063 DOHH2_400M_050219_1,5069 DOHH2_400M_050219_1,5069,KEQYQQQQQW True True KEQYQQQQQW 27.151 697.330615222454 1197193.0 5063.0 nc|ENSG00000138668|Q14103-4|HNRNPD;;ENST00000514325.1_1_4:83277919-83278597:-|nuORF;;ENSG00000138668|ENST00000313899|HNRNPD;;nc|ENSG00000138668|Q14103-3|HNRNPD;;nc|ENSG00000138668|Q14103-2|HNRNPD 7.237624486287435 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5070 27.154 142.0 568080.0 25 0 56464.0 -1 0 82 429.2339526015881 428.2266761349881 1 429.2333862185478 MULTI CID FTMS 0 0 0 5063 330616.1875 0.7012713301039083 -2 0.0496501922607421 7 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P 3 -1 3.7629 0.0 0.0 0.87872 0.0 0.0 0.0 94.04107367820998 94.04107367820998 3.762919043219777 0.0 0.0 0.0 0 0.2302046884880938 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P 0.87872 - 3 1 2.169 70852.5 1.0 1762 3306 5063 DOHH2_400M_050219_1,5070 DOHH2_400M_050219_1,5070, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5072 27.159 173.0 268070.0 25 0 9853.4 + 24551 MLDHQPPQY 9 92 564.7602579408066 1127.505962948413 2 564.7606078982353 MULTI CID FTMS 0 0 0 5071 203151.359375 0.0678875571612163 17 -1.097494125366211 1 Unmodified _MLDHQPPQY_ ENSG00000108604|ENST00000448276|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;nc|ENSG00000108604|Q92925-3|SMARCD2 29.081581746732265 0.1611639662936252 1 PQ[KT]P[QP]Y 8 5 31.749 0.0 0.0 2.8159 0.0 0.0 170.01770553042758 0.0 170.01770553042758 0.0 11.827417515368433 0.0 0.0 0 1.424742501084005 0.0 0.0 0.2887254899964357 PQ[KT]P[QP]Y 2.8159 - 260 + 1 2.169 44277.6 1.0 1763 3307 5071 DOHH2_400M_050219_1,5072 DOHH2_400M_050219_1,5072,MLDHQPPQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5073 27.164 259.0 334480.0 25 0 87208.0 -1 0 103 472.27517488286577 471.2678984162658 1 472.2737609744072 MULTI CID FTMS 0 0 0 5071 206021.046875 0.0303660342664849 20 -1.2179431915283203 2 1 W 1 -1 16.99 0.0 0.0 3.6051 0.0 0.0 267.1788919238814 0.0 267.1788919238814 0.0 8.010299956639813 0.0 0.0 0 0.0 0.0 0.0 0.0 W 3.6051 - 11 + 1 2.169 71481.9 1.0 1764 3307 5071 DOHH2_400M_050219_1,5073 DOHH2_400M_050219_1,5073, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5074 27.166 91.0 827310.0 25 0 65909.0 + 41283 VPHTRPVSL 9 87 503.2956876608167 1004.5768223884334 2 503.2958862185478 MULTI CID FTMS 0 0 0 5071 593135.75 0.0981510619442154 -2 0.0708198547363281 3 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 47.74868867922204 0.0453060283459952 1 VPHTR 5 4 69.737 0.0 0.0 6.9419 0.0 0.0 0.0 411.22617517642817 411.22617517642817 57.95432290439605 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 1.1989700043360187 0.0 + VPHTR 6.9419 + + 169 + 1 2.169 63400.7 1.0 1765 3307 5071 DOHH2_400M_050219_1,5074 DOHH2_400M_050219_1,5074,VPHTRPVSL True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5075 27.17 205.0 346830.0 25 0 26453.0 + 896 AEWSSKTSY 9 104 529.7428265268946 1057.4711001205892 2 529.7429687380791 MULTI CID FTMS 0 0 0 5071 320379.46875 0.9573105402230097 -1 0.044565200805664 4 Unmodified _AEWSSKTSY_ ENSG00000139437|ENST00000405876|TCHP;ENST00000537218.1_1_12:110338138-110342619:+|nuORF 38.17557092003332 0.0854718145212029 1 {[CP]|[EA]}WSS[KT]SY 9 0 + 48.757 0.0 0.0 4.6107 4.6107 86.674 0.0 0.0 0.0 16.440531136941907 13.46787486224656 13.46787486224656 21.14638779968488 0 0.805462187404089 0.638272163982407 0.4247425010840047 0.5 + + {[CP]|[EA]}WSS[KT]SY;{[CP]|[EA]}WS[QA]{[NV]|[RG]}[PG];{[CP]|[EA]}W{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ET]|[MV]}Y;{[CP]|[EA]}W[QA][YK]Y;{[CP]|[EA]}W[QA]S{[NV]|[RG]}[PG];{[CP]|[EA]}[{M(Oxidation (M))|F}T]H[YK]Y;{[CP]|[EA]}[{M(Oxidation (M))|F}T]HS{[NV]|[RG]}[PG] 4.6107;2.611;2.3214;2.0446;1.8118;0.98197;0.3475 +;-;-;-;-;-;- + 244 + 1 2.169 59824.3 1.0 1766 3307 5071 DOHH2_400M_050219_1,5075 DOHH2_400M_050219_1,5075,AEWSSKTSY True True AEWSSKTSY 27.170067 529.742968738079 1770107.25 5071.0 ENST00000537218.1_1_12:110338138-110342619:+|nuORF;;ENSG00000139437|ENST00000405876|TCHP 6.806743144989014 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5076 27.177 401.0 265570.0 25 0 22609.0 -1 MNPGYDCLFKL 11 89 679.3173373143159 1356.6201216954316 2 679.3175536990166 MULTI CID FTMS 0 0 0 5071 205830.515625 0.6366473504700784 -1 0.044565200805664 5 Carbamidomethyl (C) _MNPGYDC(Carbamidomethyl (C))LFKL_ nc|ENSG00000233111|Q92928|RAB1C 24.99096001346401 0.505407273373304 1 [MN]PN{I|L}NEAQ 9 -1 84.263 0.0 0.0 6.2112 0.0 0.0 0.0 342.1536959283813 342.1536959283813 59.676091339101816 0.0 0.0 0.0 0 0.9604093769761876 1.6989700043360187 0.3494850021680094 0.805462187404089 [MN]PN{I|L}NEAQ 6.2112 - 790 + 1 2.169 80605.9 1.0 1767 3307 5071 DOHH2_400M_050219_1,5076 DOHH2_400M_050219_1,5076,MNPGYDCLFKL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 5077 27.183 332.0 535810.0 25 0 98764.0 + 7848 ELLEKHGL 8 148 469.76935014571495 937.52414735823 2 469.7687560915947 MULTI CID FTMS 0 0 0 5071 181986.28125 1.0 0 0.0 6 Unmodified _ELLEKHGL_ ENSG00000151779|ENST00000281513|NBAS;nc|ENSG00000151779|A2RRP1-2|NBAS 32.30548876998284 0.3644845974844379 1 E{I|L}{I|L}EKHVA 8 2 + 50.876 0.0 0.0 5.4267 5.4267 58.125 0.0 0.0 0.0 12.480460713725384 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.3807196863200844 0.0 E{I|L}{I|L}EKHVA;E{I|L}{I|L}EKHG{I|L};E{I|L}{I|L}[DP][VG][VP] 5.4267;5.4267;1.5267 -;+;- + 1155 + 1 2.169 136012.0 1.0 1768 3307 5071 DOHH2_400M_050219_1,5077 DOHH2_400M_050219_1,5077,ELLEKHGL False True ELLEKHGL 27.183269 469.768756091595 736867.6875 5071.0 ENSG00000151779|ENST00000281513|NBAS;;nc|ENSG00000151779|A2RRP1-2|NBAS -0.0054156978925069 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5078 27.197 800.0 266320.0 25 0 20680.0 + 552 AEIEKLGQKY 10 162 589.8245052736812 1177.6344576141623 2 589.8251830935478 MULTI CID FTMS 0 0 0 5071 130806.8203125 0.4187604263218262 -1 0.044565200805664 7 Unmodified _AEIEKLGQKY_ ENSG00000119616|ENST00000341162|FCF1 61.16457814134879 0.0335312805515237 1 AE{I|L}EK{I|L}GQKY 10 0 + 103.04 0.0 0.0 8.7498 8.7498 97.2 0.0 0.0 0.0 59.619797935291 12.306634937682162 12.306634937682162 21.42741815702388 0 2.642642683904553 1.5228787452803376 0.805462187404089 0.2396518287104437 + + AE{I|L}EK{I|L}GQKY;AE{I|L}EK{I|L}[KQ]GY;{[QN]|[E{I|L}]|[KN]}AEK{I|L}{I|L}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[QN]|[E{I|L}]|[KN]}AEK{I|L}{I|L}[YE]A;{[CP]|[EA]}{I|L}EK{I|L}{I|L}[YE]A;{[CP]|[EA]}{I|L}EK{I|L}{I|L}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[QN]|[E{I|L}]|[KN]}AEK{I|L}Y{[QN]|[E{I|L}]|[KN]}A;{[QN]|[E{I|L}]|[KN]}AEK{I|L}YC[{I|L}P];AE{I|L}Y{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[VG][VP];AY[HA]K{I|L}GQKY 8.7498;6.9303;4.9945;4.9945;4.6077;4.6077;4.5893;4.4398;4.4268;4.3952 +;-;-;-;-;-;-;-;-;- + 2503 + 1 2.169 157261.2 0.6800000071525574 1769 3307 5071 DOHH2_400M_050219_1,5078 DOHH2_400M_050219_1,5078,AEIEKLGQKY True True AEIEKLGQKY 27.1971 589.825183093548 2244064.375 5071.0 ENSG00000119616|ENST00000341162|FCF1 6.247498353322347 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5079 27.201 208.0 413150.0 25 0 87006.0 -1 0 104 374.2357308661691 373.2284543995691 1 376.2330505251884 MULTI CID FTMS 0 0 0 5071 117031.7109375 0.3225058832333511 9 -0.5886039733886719 8 1 D 1 -1 14.604 0.0 0.0 3.9129 0.0 0.0 240.19029019234097 0.0 240.19029019234097 0.0 3.8907562519182193 0.0 0.0 0 0.0 0.0 0.0 0.0 D 3.9129 - 14 + 1 2.169 73666.7 1.0 1770 3307 5071 DOHH2_400M_050219_1,5079 DOHH2_400M_050219_1,5079, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5080 27.215 800.0 303600.0 25 0 67924.0 + 30600 REWNRDVQY 9 152 633.3049240315124 0 633.3046142458916 PEAK CID FTMS 0 0 0 5071 95457.703125 0.329734529208199 -1 0.044565200805664 9 Unmodified _REWNRDVQY_ ENSG00000153037|ENST00000505459|SRP19;ENST00000512790.5_1_5:112197073-112227301:+|nuORF;nc|ENSG00000153037|P09132-2|SRP19 26.020703789607367 0.146491569832683 1 QVDT 4 8 14.087 0.0 0.0 1.1139 0.0 0.0 198.10041670472475 620.2763155572874 818.3767322620122 0.0 0.0 0.0 0.0 0 0.4049471895720985 0.0 0.0 0.0 QVDT 1.1139 - 104 + 1 2.169 180574.4 0.6200000047683716 1771 3307 5071 DOHH2_400M_050219_1,5080 DOHH2_400M_050219_1,5080,REWNRDVQY False True REWNRDVQY 27.214889 633.304614245892 1860438.875 5071.0 nc|ENSG00000153037|P09132-2|SRP19;;ENST00000512790.5_1_5:112197073-112227301:+|nuORF;;ENSG00000153037|ENST00000505459|SRP19 6.966907024383545 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5081 27.223 476.0 372180.0 25 0 29364.0 + 20922 EEVQVDPRKY 10 150 421.5506360135578 1261.6300786408735 3 421.5501281619072 MULTI CID FTMS 0 0 0 5071 80864.5390625 0.2541663679072467 -2 0.0708198547363281 10 Unmodified _LNDLSSLRELC_ ENSG00000069956|ENST00000261845|MAPK6 9.243775137331635 0.8315352019864206 1 EE{[QV]|[N{I|L}]|[RA]|[KV]}VDY[RK]P 10 9 + 26.833 0.0 0.0 2.1268 2.1268 80.983 0.0 0.0 0.0 6.033796667523383 2.887955392469692 2.887955392469692 26.832750158095 0 0.0 1.0969100130080565 0.0 0.0 EE{[QV]|[N{I|L}]|[RA]|[KV]}VDY[RK]P 2.1268 - 250 + 1 2.169 140943.5 1.0 1772 3307 5071 DOHH2_400M_050219_1,5081 DOHH2_400M_050219_1,5081,LNDLSSLRELC False False EEVQVDPRKY 27.223302 421.550128161907 2362263.25 5071.0 ENSG00000069956|ENST00000261845|MAPK6 6.746307531992595 3.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5082 27.229 238.0 527770.0 25 0 91223.0 -1 TGCGKTTQI 9 120 483.2404411570184 964.4663293808368 2 483.2380554080009 MULTI CID FTMS 0 0 0 5071 167655.4375 0.2449776372917954 -3 0.0942153930664062 11 Carbamidomethyl (C) _TGC(Carbamidomethyl (C))GKTTQI_ ENSG00000163214|ENST00000457308|DHX57;nc|ENSG00000163214|Q6P158-2|DHX57 13.90604991867851 0.4602628045680013 1 [AG]REYEQ{I|L} 8 -1 + 37.551 0.0 0.0 3.8935 3.8935 69.84 0.0 0.0 0.0 0.1772876696043184 13.889115128068571 0.1772876696043184 0.1772876696043184 0 0.2302046884880938 1.0457574905606752 0.0 0.0 [AG]REYEQ{I|L};{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}YEQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}ADYEQ{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}EYEQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}GEYEQ{I|L};[AG]REYE[AG]{I|L};{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}YE[AG]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}ADYE[AG]{I|L};[{I|L}A]AA{[{M(Oxidation (M))|F}C]|[YS]}EQ{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}EYE[AG]{I|L} 3.8935;3.8751;3.7693;3.4461;3.3276;2.9331;2.9147;2.8089;2.5552;2.4787 -;-;-;-;-;-;-;-;-;- 311 1 2.169 100192.3 1.0 1773 3307 5071 DOHH2_400M_050219_1,5082 DOHH2_400M_050219_1,5082,TGCGKTTQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5084 27.234 52.0 891720.0 25 0 104510.0 + 36806 TEIEGTQKL 9 78 509.7744900226653 1017.5344271121304 2 509.7746154665947 MULTI CID FTMS 0 0 0 5083 1075345.25 0.4552138749514109 2 -0.2250823974609375 1 Unmodified _TEIEGTQKL_ ENSG00000120899|ENST00000346049|PTK2B;nc|ENSG00000120899|Q14289-2|PTK2B 55.50274090549119 0.0285720310785888 1 TE{I|L}EGTQK{I|L} 9 0 + 87.953 0.0 0.0 8.6438 8.6438 93.358 0.0 0.0 0.0 71.92237106408938 11.476285498394944 11.476285498394944 9.208187539523747 0 1.0 1.6989700043360187 0.805462187404089 0.5387254899964358 + + TE{I|L}EGTQK{I|L};TE{I|L}EGT[AG]K{I|L};TE{I|L}{M(Oxidation (M))|F}[{I|L}A]{I|L}[DP];TE{I|L}{M(Oxidation (M))|F}[{I|L}A]E[VP];TE{I|L}{M(Oxidation (M))|F}[{I|L}A][DP]{I|L};{[QN]|[E{I|L}]|[KN]}T[{I|L}A]{M(Oxidation (M))|F}{I|L}[DP];T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[{I|L}A]{I|L}[DP];T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[{I|L}A]E[VP] 8.6438;7.7388;5.9607;5.2431;5.0425;3.4003;3.0136;1.3132 +;-;-;-;-;-;-;- + 227 + 1 2.144 41357.0 1.0 1774 3308 5083 DOHH2_400M_050219_1,5084 DOHH2_400M_050219_1,5084,TEIEGTQKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5085 27.236 91.0 444190.0 25 0 26114.0 + 37944 TMDNPTTTQY 10 77 586.2501433137928 1170.4857336943855 2 586.2505370974541 MULTI CID FTMS 0 0 0 5083 737132.6875 0.6209373096773814 1 -0.114206314086914 2 Unmodified _TMDNPTTTQY_ ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF 41.95555342248728 0.1369168616057562 1 [MT]DNYT 6 5 31.488 0.0 0.0 2.6902 0.0 0.0 0.0 442.191641247373 442.191641247373 4.309093686208669 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [MT]DNYT 2.6902 - 164 1 2.144 37326.6 1.0 1775 3308 5083 DOHH2_400M_050219_1,5085 DOHH2_400M_050219_1,5085,TMDNPTTTQY False True TMDNPTTTQY 27.235658 586.250537097454 17156612.0 5083.0 ENSG00000125971|ENST00000357156|DYNLRB1;;ENST00000480759.1_1_20:33117938-33128425:+|nuORF 7.710315863291423 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5086 27.239 143.0 472100.0 25 0 74776.0 + 1939 AMKPKPLSV 9 81 485.7908904142694 969.5672278953388 2 485.7918273806572 MULTI CID FTMS 0 0 0 5083 387844.15625 1.0 0 0.0 3 Unmodified _AMKPKPLSV_ ENSG00000115760|ENST00000421745|BIRC6 32.30548876998284 0.1201446275138228 1 {[DS]|[MA]|[CV]|TT}K[KP][{I|L}P]SV 9 0 + 39.667 0.0 0.0 4.0912 4.0912 84.714 0.0 0.0 0.0 22.552783395239203 4.3888522408814055 4.3888522408814055 20.08551686413409 0 0.2614393726401688 1.5228787452803376 0.6203715150305281 0.4247425010840047 + + {[DS]|[MA]|[CV]|TT}K[KP][{I|L}P]SV;{[DS]|[MA]|[CV]|TT}KV{[VA]|[{I|L}G]}[{I|L}A][PA];{[DS]|[MA]|[CV]|TT}K[R{I|L}][{I|L}A][PA];{[DS]|[MA]|[CV]|TT}KV{[VA]|[{I|L}G]}VV[PG];{[DS]|[MA]|[CV]|TT}K[R{I|L}]VV[PG] 4.0912;2.0196;1.9669;1.7748;1.722 +;-;-;-;- + 229 + 1 2.144 56983.3 1.0 1776 3308 5083 DOHH2_400M_050219_1,5086 DOHH2_400M_050219_1,5086,AMKPKPLSV True True AMKPKPLSV 27.238527 485.791827380657 2330728.0 5083.0 ENSG00000115760|ENST00000421745|BIRC6 5.250792503356934 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5087 27.241 132.0 451580.0 25 0 60817.0 + 36895 TEQPPPRSW 9 78 549.2725246039536 1096.530496274707 2 549.2729980349541 MULTI CID FTMS 0 0 0 5083 336550.15625 0.8361328377324178 -1 0.0749778747558593 4 Unmodified _TEQPPPRSW_ ENSG00000113300|ENST00000261951|CNOT6 27.628801355627647 0.1796483985696185 1 PP[WK][DP] 6 7 23.188 0.0 0.0 2.1147 0.0 0.0 358.1470614250912 0.0 358.1470614250912 0.0 11.198400884204062 0.0 0.0 0 0.4247425010840047 0.0 0.2215141619232908 0.7059771852360797 PP[WK][DP] 2.1147 - 67 + 1 2.144 50843.1 1.0 1777 3308 5083 DOHH2_400M_050219_1,5087 DOHH2_400M_050219_1,5087,TEQPPPRSW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5088 27.245 225.0 371860.0 25 0 28262.0 + 38452 TSDDVKEQIY 10 110 599.285161667328 1196.555770401456 2 599.2858764529228 MULTI CID FTMS 0 0 0 5083 323392.21875 0.0642753217868174 -2 0.1195430755615234 5 Unmodified _TSDDVKEQIY_ ENSG00000110700|ENST00000525634|RPS13;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000534329.1_1_11:17098694-17099257:-|nuORF 93.93812099017352 0.0090513810409226 1 {[MG]|[TS]}DDVRTQ{I|L}Y 10 2 + 95.43 0.0 0.0 7.9754 7.9754 91.076 0.0 0.0 0.0 7.498774732165998 65.12858179862378 7.498774732165998 8.979400086720375 0 2.610924374808178 0.0 2.8169015600442577 0.3807196863200844 {[MG]|[TS]}DDVRTQ{I|L}Y;{[MG]|[TS]}DDVRQT{I|L}Y;{[MG]|[TS]}DDVRT[AG]{I|L}Y;{[MG]|[TS]}DDV[VG]TQ{I|L}Y;{[MG]|[TS]}DDV[VG]QT{I|L}Y;{[MG]|[TS]}DDVR[AG]T{I|L}Y;{[MG]|[TS]}DDV[VG]T[AG]{I|L}Y;{[DS]|[MA]|[CV]|TT}TDV[VG]TQ{I|L}Y;{[MG]|[TS]}DDV[VG][AG]T{I|L}Y;{[MG]|[TS]}D[VS]PSTQ{I|L}Y 7.9754;7.2249;7.2095;7.2095;6.459;6.459;6.1284;5.9889;5.3779;5.349 -;-;-;-;-;-;-;-;-;- 2361 1 2.144 65777.4 1.0 1778 3308 5083 DOHH2_400M_050219_1,5088 DOHH2_400M_050219_1,5088,TSDDVKEQIY True True TSDDVKEQIY 27.245468 599.285876452923 92455557.0 5083.0 ENST00000534329.1_1_11:17098694-17099257:-|nuORF;;ENSG00000110700|ENST00000525634|RPS13;;ENST00000526895.5_1_11:17095982-17099246:-|nuORF 7.123329957326253 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5089 27.259 798.0 556380.0 25 0 272910.0 -1 NMIPPVCEQAE 11 144 644.2911653278653 0 644.2911254763603 PEAK CID FTMS 0 0 0 5083 252908.734375 1.0 0 0.0 6 Carbamidomethyl (C) _NMIPPVC(Carbamidomethyl (C))EQAE_ ENSG00000169282|ENST00000490337|KCNAB1;nc|ENSG00000169282|Q14722-2|KCNAB1;nc|ENSG00000169282|Q14722-3|KCNAB1 23.78978130925829 0.3054658308107615 1 MPN{I|L}NAD{[TV]|[{I|L}S]}N 10 -1 52.211 0.0 0.0 4.0582 0.0 0.0 114.03471399454368 100.02330194644765 214.0580159409913 0.0 0.0 0.0 0.0 0 1.1861818737241734 0.0 0.0 1.2971062485323517 MPN{I|L}NAD{[TV]|[{I|L}S]}N 4.0582 - 465 + 1 2.144 315072.2 1.0 1779 3308 5083 DOHH2_400M_050219_1,5089 DOHH2_400M_050219_1,5089,NMIPPVCEQAE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5090 27.273 800.0 148540.0 25 0 8019.1 -1 AQCVEFYYTY 10 139 672.2833782485519 1342.5522035639035 2 672.2845336794853 MULTI CID FTMS 0 0 0 5083 222929.6875 1.0 0 0.0 7 Carbamidomethyl (C) _AQC(Carbamidomethyl (C))VEFYYTY_ ENSG00000156030|ENST00000423556|MIDEAS;nc|ENSG00000156030|Q6PJG2|MIDEAS 9.38312468134398 0.6832340498775793 1 {[{M(Oxidation (M))|F}H]|[RQ]}PEC(Carbamidomethyl (C))R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY 10 -1 + 38.95 0.0 0.0 2.9012 2.9012 69.05 0.0 0.0 0.0 13.93175948177209 8.622731327798547 8.622731327798547 1.5186375580366729 0 0.3252574989159953 0.0 1.0114393726401687 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}PEC(Carbamidomethyl (C))R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;[Y{M(Oxidation (M))|F}]EAC(Carbamidomethyl (C))R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;[Y{M(Oxidation (M))|F}]AEC(Carbamidomethyl (C))R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;[QA][HC]AC(Carbamidomethyl (C))R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;{[{M(Oxidation (M))|F}H]|[RQ]}PET{[QS]|[NT]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;{[{M(Oxidation (M))|F}H]|[RQ]}PTE{[QS]|[NT]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;[Y{M(Oxidation (M))|F}]EAT{[QS]|[NT]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;{[{M(Oxidation (M))|F}H]|[RQ]}PE[CG]R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;{[{M(Oxidation (M))|F}H]|[RQ]}PEC(Carbamidomethyl (C))[VG]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;[Y{M(Oxidation (M))|F}]TAE{[QS]|[NT]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY 2.9012;2.7881;2.5458;2.4609;2.3498;2.3373;2.2366;2.2186;2.2186;2.1881 -;-;-;-;-;-;-;-;-;- 2619 + 1 2.144 86854.7 0.9399999976158142 1780 3308 5083 DOHH2_400M_050219_1,5090 DOHH2_400M_050219_1,5090,AQCVEFYYTY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5091 27.277 206.0 469920.0 25 0 27082.0 + 553 AEIEKLGQKY 10 112 393.55195117601386 1177.6340241282417 3 393.5515014529228 MULTI CID FTMS 0 0 0 5083 218464.453125 1.0 0 0.0 8 Unmodified _AEIEKLGQKY_ ENSG00000119616|ENST00000341162|FCF1 22.65808497894818 0.4596126414678359 1 {I|L}EK{I|L}D 5 6 19.759 0.0 0.0 1.6779 0.0 0.0 200.07531415543664 376.2056063287719 576.2809204842085 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}EK{I|L}D 1.6779 - 171 + 1 2.144 83177.4 1.0 1781 3308 5083 DOHH2_400M_050219_1,5091 DOHH2_400M_050219_1,5091,AEIEKLGQKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5092 27.282 289.0 384730.0 25 0 38177.0 + 32860 SEHQPTTW 8 138 493.2229655112282 984.4313780892564 2 493.2230102419853 MULTI CID FTMS 0 0 0 5083 191005.953125 0.4672229825570427 -1 0.0749778747558593 9 Unmodified _SEHQPTTW_ ENSG00000134910|ENST00000392708|STT3A;ENSG00000163527|ENST00000295770|STT3B;ENST00000423527.5_1_3:31574490-31661461:+|nuORF;ENST00000436236.1_1_3:31638325-31661336:+|nuORF;ENST00000526726.1_1_11:125479363-125482632:+|nuORF;ENST00000531001.1_1_11:125478078-125479612:+|nuORF;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;nc|ENSG00000134910|P46977-2|STT3A 54.773552608820026 0.1167943196628344 1 [HQ]TD[TP]TW 8 4 + 44.095 0.0 0.0 4.4792 4.4792 80.271 0.0 0.0 0.0 11.157646411246668 9.262137858390808 9.262137858390808 7.781512503836431 0 0.9247425010840048 0.6777807052660807 0.9247425010840048 0.1989700043360188 [HQ]TD[TP]TW;[HQ]TS[EP]TW;[HQ]TD[W{I|L}]W;{[ES]|[DT]|[{I|L}C]}HQ[TP]TW;[HS]EQ[TP]TW;{[ES]|[DT]|[{I|L}C]}H[AG][TP]TW;{[ES]|[DT]|[{I|L}C]}HQ[W{I|L}]W;{[CT]|[{M(Oxidation (M))|F}G]}T[TP][YN]W;[HS]E[AG][TP]TW;AA[HS]D[TP]TW 4.4792;3.6888;3.3734;3.3458;2.9663;2.405;2.24;2.0429;2.0255;1.9377 -;-;-;+;-;-;-;-;-;- + 512 1 2.144 87034.8 1.0 1782 3308 5083 DOHH2_400M_050219_1,5092 DOHH2_400M_050219_1,5092,SEHQPTTW True True SEHQPTTW 27.282308 493.2224 2386652.25 5083.0 ENST00000531001.1_1_11:125478078-125479612:+|nuORF;;ENST00000423527.5_1_3:31574490-31661461:+|nuORF;;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;;ENSG00000163527|ENST00000295770|STT3B;;ENST00000526726.1_1_11:125479363-125482632:+|nuORF;;nc|ENSG00000134910|P46977-2|STT3A;;ENST00000436236.1_1_3:31638325-31661336:+|nuORF;;ENSG00000134910|ENST00000392708|STT3A 5.128914038340251 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5093 27.287 261.0 171130.0 25 0 24237.0 + 22171 LPPVSATK 8 82 406.7481440201691 811.4817351071382 2 406.7475158572197 MULTI CID FTMS 0 0 0 5083 205749.71875 1.0 0 0.0 10 Unmodified _LPPVSATK_ REV__ENST00000477661.1_1_10:5005492-5009304:+|nuORF 5.230669730166228 0.792582437072536 1 {I|L}G 2 -1 9.464 0.0 0.0 1.1663 0.0 0.0 570.3019845961992 68.05152307681874 638.3535076730179 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}G 1.1663 - 40 + 1 2.144 39461.4 1.0 1783 3308 5083 DOHH2_400M_050219_1,5093 DOHH2_400M_050219_1,5093,LPPVSATK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5094 27.298 530.0 434090.0 25 0 27852.0 + 707 AENVPASKF 9 157 481.7522624460876 961.4899719589752 2 481.7509338259697 MULTI CID FTMS 0 0 0 5083 182877.28125 1.0 0 0.0 11 Unmodified _AENVPASKF_ ENSG00000107036|ENST00000414202|RIC1;nc|ENSG00000107036|Q4ADV7-2|RIC1;nc|ENSG00000107036|Q4ADV7-3|RIC1 30.7034409873982 0.1405282614900322 1 {[SA]|[TG]}PVPPVN 8 6 39.561 0.0 0.0 4.1145 0.0 0.0 0.0 197.0583673049314 197.0583673049314 -7.341532552839013 0.0 -7.341532552839013 0.0 0 1.4876954943324543 2.0 0.25 0.0 {[SA]|[TG]}PVPPVN 4.1145 - 1585 1 2.144 176701.7 1.0 1784 3308 5083 DOHH2_400M_050219_1,5094 DOHH2_400M_050219_1,5094,AENVPASKF False True AENVPASKF 27.297635 481.75093382597 1367354.75 5083.0 nc|ENSG00000107036|Q4ADV7-3|RIC1;;nc|ENSG00000107036|Q4ADV7-2|RIC1;;ENSG00000107036|ENST00000414202|RIC1 5.352954228719075 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5095 27.311 800.0 275900.0 25 0 17631.0 37104 TGSVPTFKHL 10 208 362.8707705431264 0 362.8708373904228 PEAK CID FTMS 0 0 0 5083 137171.0625 1.0 0 0.0 12 Unmodified _TGSVPTFKHL_ ENSG00000159423|ENST00000375341|ALDH4A1;ENST00000494072.3_3_1:19186098-19209913:-|nuORF;nc|ENSG00000159423|P30038-2|ALDH4A1;nc|ENSG00000159423|P30038-3|ALDH4A1 9.38312468134398 0.3794934366477728 1 PH 2 8 10.969 0.0 0.0 1.5156 0.0 0.0 196.4396114070429 290.1517122858032 486.5913236928461 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PH 1.5156 - 46 + 1 2.144 176809.2 0.5899999737739563 1785 3308 5083 DOHH2_400M_050219_1,5095 DOHH2_400M_050219_1,5095,TGSVPTFKHL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5096 27.313 61.0 741570.0 25 0 239480.0 -1 0 74 368.2073102644208 367.2000337978208 1 368.2067443728447 MULTI CID FTMS 0 0 0 5083 1074901.625 0.4072047457521817 10 -0.5805511474609375 13 1 {I|L} 1 -1 10.596 0.0 0.0 2.8856 0.0 0.0 236.1048627546552 0.0 236.1048627546552 0.0 4.363847333060578 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.8856 - 10 + 1 2.144 45344.1 1.0 1786 3308 5083 DOHH2_400M_050219_1,5096 DOHH2_400M_050219_1,5096, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5097 27.314 47.0 1607800.0 25 0 187540.0 + 33141 SEVILHHEY 9 99 563.7809740441552 1125.5473951551105 2 563.7798339724541 MULTI CID FTMS 0 0 0 5083 343057.5625 0.1568450639927927 -1 0.0749778747558593 14 Unmodified _SEVILHHEY_ ENSG00000144028|ENST00000323853|SNRNP200 67.83816525789305 0.0219346420158844 1 {[ES]|[DT]|[{I|L}C]}V{I|L}{I|L}H[KC]D 9 3 46.048 0.0 0.0 4.0912 0.0 0.0 0.0 98.0255373590453 98.0255373590453 10.184465535402287 0.0 0.0 0.0 0 1.2059771852360797 0.0 0.5994850021680094 0.0 {[ES]|[DT]|[{I|L}C]}V{I|L}{I|L}H[KC]D 4.0912 - 514 + 1 2.144 64609.5 1.0 1787 3308 5083 DOHH2_400M_050219_1,5097 DOHH2_400M_050219_1,5097,SEVILHHEY True True SEVILHHEY 27.314247 563.779833972454 20454292.0 5083.0 ENSG00000144028|ENST00000323853|SNRNP200 8.34504763285319 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5098 27.328 800.0 107520.0 25 0 4018.8 + 34470 SMDNNRSLDLD 11 114 648.2800149870567 1294.5454770409133 2 648.2801391482353 MULTI CID FTMS 0 0 0 5083 176047.421875 1.0 0 0.0 15 Oxidation (M) _SM(Oxidation (M))DNNRSLDLD_ CON__P04264;CON__P12035;CON__P50446;CON__Q5XQN5;CON__Q6IFZ6;CON__Q7Z794;CON__Q8BGZ7;CON__Q922U2;ENSG00000167768|ENST00000252244|KRT1;ENSG00000186442|ENST00000417996|KRT3;ENSG00000189182|ENST00000341809|KRT77 64.69154705217129 0.0501048056983406 1 {NN|[MP]|[D{I|L}]|[EV]}S[WK]{[DS]|[MA]|[CV]|TT}ND{[ES]|[DT]|[{I|L}C]} 11 7 + 42.214 0.0 0.0 3.261 3.261 70.726 0.0 0.0 0.0 8.23908740944318 5.559706320125663 5.559706320125663 2.2184874961635543 0 0.6989700043360187 2.0 1.024227503252014 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}S[WK]{[DS]|[MA]|[CV]|TT}ND{[ES]|[DT]|[{I|L}C]};{NN|[MP]|[D{I|L}]|[EV]}S[RN][{M(Oxidation (M))|F}V]ND{[ES]|[DT]|[{I|L}C]};{NN|[MP]|[D{I|L}]|[EV]}S[WE]C[{I|L}V]D{[ES]|[DT]|[{I|L}C]};{NN|[MP]|[D{I|L}]|[EV]}S[YQ][KP]ND{[ES]|[DT]|[{I|L}C]};{NN|[MP]|[D{I|L}]|[EV]}S[RN]N[{M(Oxidation (M))|F}V]D{[ES]|[DT]|[{I|L}C]};{NN|[MP]|[D{I|L}]|[EV]}S[RN]ND{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NN;{NN|[MP]|[D{I|L}]|[EV]}S[WK][C(Carbamidomethyl (C))R]D{[ES]|[DT]|[{I|L}C]};{NN|[MP]|[D{I|L}]|[EV]}S[RN]N{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DNN;{[TV]|[{I|L}S]}D[WK]{[DS]|[MA]|[CV]|TT}ND{[ES]|[DT]|[{I|L}C]};{NN|[MP]|[D{I|L}]|[EV]}S[W{M(Oxidation (M))|F}][DG]{I|L}DNN 3.261;3.0896;2.8737;2.857;2.8383;2.8315;2.7343;2.7142;2.6245;2.6224 -;-;-;-;-;-;-;-;-;- 823 1 2.144 71845.4 0.8399999737739563 1788 3308 5083 DOHH2_400M_050219_1,5098 DOHH2_400M_050219_1,5098,SMDNNRSLDLD True False SMDNNRSLDLD 27.328091 648.280139148235 995008.6875 5083.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;Q8BGZ7;;ENSG00000186442|ENST00000417996|KRT3;;P12035;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;Q5XQN5;;P50446;;Q6IFZ6;;Q922U2 5.486141999562581 2.0 True 11.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 5099 27.343 800.0 211940.0 25 0 16280.0 + 38006 TPAAGDRQAY 10 186 525.2537681279684 1048.4929833227368 2 525.2261840701103 MULTI CID FTMS 0 0 0 5083 56072.140625 0.0188147813456568 12 -0.7511005401611328 16 Unmodified _TPAAGDRQAY_ REV__ENSG00000237172|ENST00000449549|B3GNT9 20.41453444215458 0.5050059513928961 1 ARQPHPY 7 -1 34.118 0.0 0.0 3.254 0.0 0.0 181.073409839188 0.0 181.073409839188 0.0 15.807341438123622 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.3494850021680094 ARQPHPY 3.254 - 5746 + 1 2.144 137003.9 0.7599999904632568 1789 3308 5083 DOHH2_400M_050219_1,5099 DOHH2_400M_050219_1,5099,TPAAGDRQAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5101 27.347 3.9 9477100.0 25 0 708760.0 1162 AHDEVAPFAL 10 64 535.2670612040412 1068.5195694748822 2 535.2675659060478 MULTI CID FTMS 0 0 0 5100 14108724.0 0.647804291230664 1 -0.1108760833740234 1 Unmodified _AHDEVAPFAL_ ENST00000443339.5_1_3:9471730-9475758:+|nuORF 20.453626601364224 0.5043500229302764 1 QDT[WK]A{I|L} 7 7 67.127 0.0 0.0 6.2823 0.0 0.0 208.0830593203885 0.0 208.0830593203885 0.0 52.065629270416025 0.0 0.0 0 2.4247425010840047 0.0 1.1989700043360187 0.3054621874040891 QDT[WK]A{I|L} 6.2823 - 105 + 1 2.123 35843.6 1.0 1790 3309 5100 DOHH2_400M_050219_1,5101 DOHH2_400M_050219_1,5101,AHDEVAPFAL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5102 27.354 356.0 174130.0 25 0 11492.0 + 26173 NQEFMQEDIF 10 98 650.781377782446 1299.548202631692 2 650.7812988162041 MULTI CID FTMS 0 0 0 5100 270775.625 0.2216248103808813 2 -0.1805877685546875 2 Unmodified _NQEFMQEDIF_ REV__ENSG00000171385|ENST00000302127|KCND3;REV__nc|ENSG00000171385|Q9UK17-2|KCND3 13.042465956692816 0.6287021003332052 1 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F} 11 -1 + 80.661 0.0 0.0 6.2069 6.2069 87.416 0.0 0.0 0.0 4.3753063169585005 66.05707010150613 4.3753063169585005 9.128498242810991 0 0.805462187404089 0.0 0.5866968715561641 1.174742501084005 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F};[HS][PG]DEAQQNA{M(Oxidation (M))|F};[HS][PG]DEA[AG]QNA{M(Oxidation (M))|F};[HS][PG]DEAQQGGA{M(Oxidation (M))|F};[HS][PG]DEAQ[AG]NA{M(Oxidation (M))|F};[HV]M[Y{M(Oxidation (M))|F}]E[HN][HS] 6.2069;5.5044;5.5044;5.5044;5.1627;4.4626;4.4626;4.4626;1.5996 -;-;-;-;-;-;-;-;- 664 1 2.123 52300.8 1.0 1791 3309 5100 DOHH2_400M_050219_1,5102 DOHH2_400M_050219_1,5102,NQEFMQEDIF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5103 27.355 8.3 5365200.0 25 0 422500.0 + 23426 LTEQYNEQY 9 87 594.2645695515978 1186.5145861699957 2 594.2646972537041 MULTI CID FTMS 0 0 0 5100 7072584.0 0.4590360092191639 -1 0.114206314086914 3 Unmodified _LTEQYNEQY_ ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 49.93300154707207 0.0405168250806675 1 [{I|L}T]EQYN 6 3 40.27 0.0 0.0 3.3939 0.0 0.0 0.0 435.1525615940768 435.1525615940768 15.527850813829131 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.9634679910804403 0.0 + [{I|L}T]EQYN 3.3939 + + 618 1 2.123 38586.4 1.0 1792 3309 5100 DOHH2_400M_050219_1,5103 DOHH2_400M_050219_1,5103,LTEQYNEQY True True LTEQYNEQY 27.35503 594.264697253704 77790872.0 5100.0 ENSG00000173933|ENST00000310092|RBM4;;nc|ENSG00000239306|Q96PK6-5|RBM14 6.572637399037679 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5104 27.356 43.0 1165700.0 25 0 158230.0 + 5598 DNNRSLDLD 9 80 531.2463988864293 1060.4782448396586 2 531.2470580935478 MULTI CID FTMS 0 0 0 5100 1396818.125 1.0 0 0.0 4 Unmodified _DNNRSLDLD_ CON__P04264;CON__P12035;CON__P50446;CON__Q5XQN5;CON__Q6IFZ6;CON__Q7Z794;CON__Q8BGZ7;CON__Q922U2;ENSG00000167768|ENST00000252244|KRT1;ENSG00000186442|ENST00000417996|KRT3;ENSG00000189182|ENST00000341809|KRT77 43.9818466556824 0.0535980856389242 1 {NN|[MP]|[D{I|L}]|[EV]}SRNND{I|L}D 9 4 + 73.599 0.0 0.0 6.9401 6.9401 86.963 0.0 0.0 0.0 6.023945790210277 13.46787486224656 6.023945790210277 6.023945790210277 0 0.4247425010840047 2.0 0.3494850021680094 0.805462187404089 {NN|[MP]|[D{I|L}]|[EV]}SRNND{I|L}D;{[TV]|[{I|L}S]}DRNND{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}S[PS]S{I|L}D{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}SRNGGD{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}SRGGND{I|L}D;{[TV]|[{I|L}S]}DRNGGD{I|L}D;{[TV]|[{I|L}S]}DRGGND{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}SRGGGGD{I|L}D;{[TV]|[{I|L}S]}DRGGGGD{I|L}D;[DN][RN]S{I|L}D{I|L}D 6.9401;6.3721;6.3557;6.0718;6.0718;5.5038;5.5038;5.2077;4.6396;4.4967 -;-;-;-;-;-;-;-;-;+ + 521 1 2.123 43889.3 1.0 1793 3309 5100 DOHH2_400M_050219_1,5104 DOHH2_400M_050219_1,5104,DNNRSLDLD True True DNNRSLDLD 27.356247 531.247058093548 6985782.5 5100.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;Q8BGZ7;;ENSG00000186442|ENST00000417996|KRT3;;P12035;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;Q5XQN5;;P50446;;Q6IFZ6;;Q922U2 4.064258734385173 2.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 5105 27.357 44.0 981840.0 25 0 136830.0 + 15978 ITDKNSLAY 9 77 512.7691388255148 1023.5237247178296 2 512.7692748904228 MULTI CID FTMS 0 0 0 5100 1385448.5 1.0 0 0.0 5 Unmodified _ITDKNSLAY_ ENSG00000163510|ENST00000410053|CWC22 27.628801355627647 0.1796483985696185 1 {I|L}T 2 7 39.693 0.0 0.0 3.878 0.0 0.0 0.0 806.3725069635374 806.3725069635374 14.916440611282624 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + {I|L}T 3.878 + + 50 + 1 2.123 40891.8 1.0 1794 3309 5100 DOHH2_400M_050219_1,5105 DOHH2_400M_050219_1,5105,ITDKNSLAY False True ITDKNSLAY 27.357484 512.769274890423 6630751.0 5100.0 ENSG00000163510|ENST00000410053|CWC22 4.074557781219482 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5106 27.359 40.0 1213700.0 25 0 85296.0 + 27995 PMGPPPVSTPL 11 78 364.8635633610828 1091.5688606834483 3 364.8633911013603 MULTI CID FTMS 0 0 0 5100 1191437.75 0.8086992141836217 -1 0.114206314086914 6 Unmodified _PMGPPPVSTPL_ REV__ENSG00000119596|ENST00000325680|YLPM1 13.90604991867851 0.7458848613461305 1 MPTP{I|L} 5 -1 24.125 0.0 0.0 2.2101 0.0 0.0 534.2800892241294 0.0 534.2800892241294 0.0 3.947340481202062 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.0 MPTP{I|L} 2.2101 - 104 1 2.123 51013.9 1.0 1795 3309 5100 DOHH2_400M_050219_1,5106 DOHH2_400M_050219_1,5106,PMGPPPVSTPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5107 27.36 44.0 1143600.0 25 0 132240.0 38146 TPPAPCLPSPI 11 83 546.7915414398834 1091.5685299465667 2 546.7917358279228 MULTI CID FTMS 0 0 0 5100 1117252.625 0.968308186052538 -1 0.114206314086914 7 Unmodified _TPPAPCLPSPI_ ENSG00000215182|ENST00000621226|MUC5AC 21.53697664764585 0.586507868110548 1 TPMKQ 5 9 52.708 0.0 0.0 4.8287 0.0 0.0 0.0 503.25889002017817 503.25889002017817 11.962724883926654 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 TPMKQ 4.8287 - 111 + 1 2.123 48870.9 1.0 1796 3309 5100 DOHH2_400M_050219_1,5107 DOHH2_400M_050219_1,5107,TPPAPCLPSPI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5108 27.362 84.0 915650.0 25 0 199400.0 + 39946 VGAFGGRH 8 88 400.7132961612762 799.4120393893525 2 400.7130004763603 MULTI CID FTMS 0 0 0 5100 766753.75 0.814394288912064 -1 0.114206314086914 8 Unmodified _VGAFGGRH_ REV__ENSG00000185105|ENST00000409745|MYADML2 0.7936320650641473 0.8195151834710337 1 {[QD]|[EN]|[WG]|[KD]|[RS]}VY{I|L}Y 6 -1 + 39.232 0.0 0.0 4.9076 4.9076 78.628 0.0 0.0 0.0 1.4165061435177506 22.047961836341585 1.4165061435177506 4.062959475437751 0 0.75 0.0 0.5356668758921829 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}VY{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VYY;{NN|[MP]|[D{I|L}]|[EV]}KVYY;{[QV]|[N{I|L}]|[RA]|[KV]}DY{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}YY;{[QV]|[N{I|L}]|[RA]|[KV]}EVYY;{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}YY;{[TV]|[{I|L}S]}AAY{I|L}Y;{[TV]|[{I|L}S]}[VG]VYY;{[TV]|[{I|L}S]}AA{I|L}YY 4.9076;4.3993;4.3993;4.0277;3.9039;3.5194;3.024;2.53;2.0217;1.5263 -;-;-;-;-;-;-;-;-;- 194 1 2.123 67542.5 1.0 1797 3309 5100 DOHH2_400M_050219_1,5108 DOHH2_400M_050219_1,5108,VGAFGGRH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5109 27.364 99.0 693210.0 25 0 81315.0 + 26443 NTEEEGLKY 9 99 541.753525549429 1081.492498165658 2 541.7535888552666 MULTI CID FTMS 0 0 0 5100 642709.25 0.3204478776741363 -1 0.114206314086914 9 Unmodified _NTEEEGLKY_ ENSG00000029363|ENST00000531224|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;nc|ENSG00000029363|Q9NYF8-3|BCLAF1 72.96794272382148 0.0199516581995792 1 NTEEE{[VA]|[{I|L}G]}KY 9 0 + 95.543 0.0 0.0 8.8343 8.8343 98.822 0.0 0.0 0.0 69.47473899916764 14.09256854528806 14.09256854528806 56.470235455126485 0 0.75 2.0 1.2302046884880935 0.2887254899964357 + + NTEEE{[VA]|[{I|L}G]}KY;NT{M(Oxidation (M))|F}[YR]{[VA]|[{I|L}G]}[DP];NT{M(Oxidation (M))|F}[YR][TP][PS];NT{M(Oxidation (M))|F}[YK]QQ[PG];[K{I|L}][WY]{M(Oxidation (M))|F}YY;M[KC][YK]{I|L}[C(Carbamidomethyl (C))H] 8.8343;3.6128;3.1297;2.8101;0.48141;0.17423 +;-;-;-;-;- + 625 + 1 2.123 55538.3 1.0 1798 3309 5100 DOHH2_400M_050219_1,5109 DOHH2_400M_050219_1,5109,NTEEEGLKY True True NTEEEGLKY 27.363936 541.753588855267 9164376.0 5100.0 nc|ENSG00000029363|Q9NYF8-2|BCLAF1;;ENSG00000029363|ENST00000531224|BCLAF1;;nc|ENSG00000029363|Q9NYF8-3|BCLAF1 6.929473082224528 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5110 27.366 84.0 866440.0 25 0 73871.0 + 33143 SEVILHHEY 9 98 376.1877811074812 0 376.1880676150322 PEAK CID FTMS 0 0 0 5100 611240.0 1.0 0 0.0 10 Unmodified _SEVILHHEY_ ENSG00000144028|ENST00000323853|SNRNP200 23.78978130925829 0.1667157386347964 1 {I|L}H[C(Carbamidomethyl (C))S]D 5 7 13.997 0.0 0.0 1.8653 0.0 0.0 53.041125649177 82.06704889468983 135.10817454386682 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.0 {I|L}H[C(Carbamidomethyl (C))S]D 1.8653 - 109 + 1 2.123 65337.2 1.0 1799 3309 5100 DOHH2_400M_050219_1,5110 DOHH2_400M_050219_1,5110,SEVILHHEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5111 27.368 129.0 609590.0 25 0 99698.0 + 26559 NVKVDPEIQ 9 96 521.2824977650715 1040.550442596943 2 521.2822753787041 MULTI CID FTMS 0 0 0 5100 553450.0 1.0 0 0.0 11 Unmodified _NVKVDPEIQ_ CON__P35908;CON__P35908v2;ENSG00000172867|ENST00000309680|KRT2 61.60191391372663 0.0251951588191061 1 {[NV]|[RG]}KVD[EP]{I|L}Q 9 0 + 50.005 0.0 0.0 4.8056 4.8056 81.09 0.0 0.0 0.0 4.137342758552691 23.7979766601784 4.137342758552691 7.257724967479859 0 1.2134679910804405 0.0 0.3807196863200844 0.5189301784845296 + + {[NV]|[RG]}KVD[EP]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NVD[EP]{I|L}Q;[EP]DVK{I|L}NVQ;[KG][VG]VD[EP]{I|L}Q;[EP]DV{I|L}KNVQ;[EP]DVK{[NV]|[RG]}{I|L}Q;[EP]{I|L}[QT]{I|L}NVQ;{[QV]|[N{I|L}]|[RA]|[KV]}GGVD[EP]{I|L}Q;[EP]DVK{I|L}GGVQ;{[NV]|[RG]}[WR][EP]{I|L}Q 4.8056;4.1082;4.0427;4.0147;3.6334;3.4691;3.3979;3.2232;3.1578;3.0646 +;-;-;-;-;-;-;-;-;- + 479 1 2.123 62285.7 1.0 1800 3309 5100 DOHH2_400M_050219_1,5111 DOHH2_400M_050219_1,5111,NVKVDPEIQ True True NVKVDPEIQ 27.368461 521.282275378704 2989893.0 5100.0 P35908;;P35908v2;;ENSG00000172867|ENST00000309680|KRT2 5.521697044372559 2.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 5112 27.373 227.0 372540.0 25 0 23228.0 + 25417 NEDEDSPNKLY 11 113 662.2892339651546 1322.5639149971091 2 662.2897827029228 MULTI CID FTMS 0 0 0 5100 393795.5625 0.3057590774947466 -1 0.114206314086914 12 Unmodified _NEDEDSPNKLY_ ENSG00000071082|ENST00000264258|RPL31;ENST00000480540.1_1_14:59261390-59261744:+|nuORF;nc|ENSG00000071082|P62899-2|RPL31;nc|ENSG00000071082|P62899-3|RPL31 132.56650051923685 0.0500337096861189 1 {[QD]|[EN]|[WG]|[KD]|[RS]}DEDS[NP]K{I|L}Y 11 0 + 87.96 0.0 0.0 6.6507 6.6507 83.957 0.0 0.0 0.0 3.681960381253006 5.36150500836483 3.681960381253006 3.681960381253006 0 3.686181873724173 0.0 1.642642683904553 0.8252574989159953 + + {[QD]|[EN]|[WG]|[KD]|[RS]}DEDS[NP]K{I|L}Y;[AG]DDEDS[NP]K{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NEDS[NP]K{I|L}Y;{[QN]|[E{I|L}]|[KN]}P{I|L}SDED{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGEDS[NP]K{I|L}Y;[NP]KS{I|L}DED{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{[QN]|[E{I|L}]|[KN]}PS{I|L}DED{[QD]|[EN]|[WG]|[KD]|[RS]}Y;[NP]K{I|L}SDED{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}DER[HT]{M(Oxidation (M))|F}{I|L}Y;[AG]DDER[HT]{M(Oxidation (M))|F}{I|L}Y 6.6507;6.3723;5.6476;4.6377;4.5225;4.4529;4.4434;4.4163;4.19;4.0979 +;-;-;-;-;-;-;-;-;- + 882 1 2.123 67549.1 1.0 1801 3309 5100 DOHH2_400M_050219_1,5112 DOHH2_400M_050219_1,5112,NEDEDSPNKLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5113 27.385 725.0 298590.0 25 0 15681.0 + 5348 DLHLKGQAV 9 168 490.77958639742457 0 490.7795898318291 PEAK CID FTMS 0 0 0 5100 275446.59375 1.0 0 0.0 13 Unmodified _DLHLKGQAV_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 103.35351024395868 0.0202588131840038 1 AGAGK{I|L}D{I|L} 8 8 31.07 0.0 0.0 3.1719 0.0 0.0 117.07626403369656 134.0365389459594 251.11280297965595 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.6747425010840047 0.805462187404089 AGAGK{I|L}D{I|L} 3.1719 - 717 + 1 2.123 164270.9 1.0 1802 3309 5100 DOHH2_400M_050219_1,5113 DOHH2_400M_050219_1,5113,DLHLKGQAV True True DLHLKGQAV 27.385297 490.779589831829 1062649.625 5100.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 6.269693692525228 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5114 27.392 393.0 524380.0 25 0 27805.0 + 41281 VPHTAPPR 8 142 437.7483952119821 873.4822374907643 2 437.7482787966728 MULTI CID FTMS 0 0 0 5100 229017.59375 1.0 0 0.0 14 Unmodified _VPHTAPPR_ nc|ENSG00000214900|Q8WXQ3|LINC01599 42.09456458481378 0.1992492688217789 1 VPSVGTVH 8 6 66.0 0.0 0.0 7.5559 0.0 0.0 0.0 94.03053461246328 94.03053461246328 44.88068909103268 0.0 0.0 0.0 0 1.288106835214472 2.0 0.8494850021680094 0.0 VPSVGTVH 7.5559 - 1388 + 1 2.123 160388.4 1.0 1803 3309 5100 DOHH2_400M_050219_1,5114 DOHH2_400M_050219_1,5114,VPHTAPPR False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 5115 27.397 269.0 364720.0 25 0 27081.0 21267 LPECTPIY 8 125 468.23267570054577 934.4507984678916 2 468.2315856814384 MULTI CID FTMS 0 0 0 5100 199323.75 1.0 0 0.0 15 Unmodified _LPECTPIY_ ENSG00000058668|ENST00000357681|ATP2B4;nc|ENSG00000058668|P23634-2|ATP2B4;nc|ENSG00000058668|P23634-3|ATP2B4;nc|ENSG00000058668|P23634-4|ATP2B4;nc|ENSG00000058668|P23634-5|ATP2B4;nc|ENSG00000058668|P23634-7|ATP2B4;nc|ENSG00000058668|P23634-8|ATP2B4;nc|ENSG00000058668|P23634|ATP2B4 20.871210003555333 0.6025813472596342 1 QYAY 4 7 22.449 0.0 0.0 2.4023 0.0 0.0 391.2094245182803 0.0 391.2094245182803 0.0 12.359856381998782 0.0 0.0 0 0.75 0.0 0.0 0.0 QYAY 2.4023 - 171 + 1 2.123 80140.4 1.0 1804 3309 5100 DOHH2_400M_050219_1,5115 DOHH2_400M_050219_1,5115,LPECTPIY False True RSDGAGPLY 27.39729 468.231585681438 984888.1875 5100.0 ENSG00000167113|ENST00000300452|COQ4;;nc|ENSG00000167113|Q9Y3A0-2|COQ4 1.691570242245992 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5116 27.411 800.0 355790.0 25 0 25972.0 + 42377 VTDPEKLNNY 10 206 596.7958262286942 1191.5770995241885 2 596.7968017458916 MULTI CID FTMS 0 0 0 5100 148458.921875 0.0956467922923111 -4 0.2600040435791015 16 Unmodified _VTDPEKLNNY_ ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L 151.47984550603806 3.78057858509238e-05 1 VTDPE[K{I|L}]NNY 10 0 + 108.67 0.0 0.0 9.1202 9.1202 93.135 0.0 0.0 0.0 33.77882126759586 13.521825181113629 13.521825181113629 9.164539485499262 0 2.041808923764867 1.6989700043360187 0.5242275032520141 2.2658715643802765 + + VTDPE[K{I|L}]NNY;VTDPE[K{I|L}]GGNY;VTDPE[K{I|L}]NGGY;VTPDE[K{I|L}]NNY;VTDPE[K{I|L}]Y{NN|[MP]|[D{I|L}]|[EV]};{[TV]|[{I|L}S]}DPG{I|L}NYD[KA];VTPDE[K{I|L}]GGNY;{[TV]|[{I|L}S]}PG{I|L}DNYD[KA];{[TV]|[{I|L}S]}PG{I|L}NDYD[KA];VTDPN[SG]{I|L}{I|L}NY 9.1202;8.351;8.0947;7.4132;7.1107;6.6892;6.6441;6.6223;6.4746;6.4007 +;-;-;-;-;-;-;-;-;- + 15999 + 1 2.123 209546.9 0.8899999856948853 1805 3309 5100 DOHH2_400M_050219_1,5116 DOHH2_400M_050219_1,5116,VTDPEKLNNY True True VTDPEKLNNY 27.411122 596.796801745892 20927344.0 5100.0 ENSG00000104885|ENST00000398665|DOT1L;;nc|ENSG00000104885|Q8TEK3-1|DOT1L 8.159623463948568 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5117 27.426 800.0 81769.0 25 0 6006.5 + 7831 ELKQEVIST 9 109 523.7902709841728 0 523.7902709841728 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _ELKQEVIST_ ENSG00000204628|ENST00000512805|RACK1;ENST00000506742.2_1_5:108120754-108121222:+|nuORF 39.957323273325 0.0619271662220897 1 {I|L}W 2 8 13.271 0.0 0.0 1.2693 0.0 0.0 224.09706620918115 519.2915133111936 743.3885795203748 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}W 1.2693 - 46 + 1 2.123 54595.8 0.699999988079071 1806 3309 5100 DOHH2_400M_050219_1,5117 DOHH2_400M_050219_1,5117,ELKQEVIST True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5118 27.44 800.0 152290.0 25 0 9512.6 + 13074 HEAERNIAL 9 173 526.7785178432645 1051.5424827533288 2 526.7785522341728 MULTI CID FTMS 0 0 0 5100 220232.625 1.0 0 0.0 18 Unmodified _HEAERNIAL_ chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;nc|ENSG00000196862|Q7Z3J3-2|RGPD4 41.95555342248728 0.0647214845423414 1 HE 2 7 42.945 0.0 0.0 4.084 0.0 0.0 0.0 782.4194505071508 782.4194505071508 9.594625370097646 0.0 0.0 0.0 0 0.6747425010840047 1.5228787452803376 0.0 0.0 + HE 4.084 + + 1240 + 1 2.123 93960.7 0.9200000166893004 1807 3309 5100 DOHH2_400M_050219_1,5118 DOHH2_400M_050219_1,5118,HEAERNIAL True True HEAERNIAL 27.439959 526.778552234173 722425.3125 5100.0 ENSG00000153201|ENST00000283195|RANBP2;;ENSG00000153165|ENST00000409886|RGPD3;;nc|ENSG00000183054|Q99666-2|RGPD5;;ENSG00000169629|ENST00000302558|RGPD8;;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;;ENSG00000015568|ENST00000016946|RGPD5;;ENSG00000185304|ENST00000398146|RGPD2;;ENSG00000187627|ENST00000641458|RGPD1;;ENSG00000183054|ENST00000329516|RGPD6;;ENSG00000196862|ENST00000408999|RGPD4;;nc|ENSG00000187627|P0DJD0|RGPD1;;nc|ENSG00000196862|Q7Z3J3-2|RGPD4 5.2782894770304365 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5119 27.454 800.0 181060.0 25 0 12122.0 + 42805 VVKPPGSSL 9 187 442.2651616239266 0 442.2664062380791 PEAK CID FTMS 0 0 0 5100 134390.15625 1.0 0 0.0 19 Unmodified _VVKPPGSSL_ ENSG00000163930|ENST00000460680|BAP1 26.88365393820708 0.1386685954232994 1 KD 2 8 14.776 0.0 0.0 1.6743 0.0 0.0 198.13330093900703 438.2328613168869 636.3661622558939 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 KD 1.6743 - 63 + 1 2.123 116261.0 0.6399999856948853 1808 3309 5100 DOHH2_400M_050219_1,5119 DOHH2_400M_050219_1,5119,VVKPPGSSL False True VVKPPGSSL 27.453776 442.266406238079 988791.8125 5100.0 ENSG00000163930|ENST00000460680|BAP1 3.74653426806132 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5121 27.458 4.0 7226400.0 25 0 1552000.0 + 18772 LANRVLAA 8 49 414.2587371651272 826.5029213970545 2 414.2587158083916 MULTI CID FTMS 0 0 0 5120 8061167.0 0.1020092843862238 2 -0.1371784210205078 1 Unmodified _LANRVLAA_ ENST00000433119.5_1_3:13522787-13522853:+|nuORF 19.438996006549623 0.6237395211498085 1 {I|L}A 2 6 45.217 0.0 0.0 5.4708 0.0 0.0 0.0 639.3592896627231 639.3592896627231 33.22682509756042 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}A 5.4708 + + 6 + 1 2.109 28348.7 1.0 1809 3310 5120 DOHH2_400M_050219_1,5121 DOHH2_400M_050219_1,5121,LANRVLAA False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5122 27.459 11.0 5934900.0 25 0 674710.0 + 41284 VPHTRPVSL 9 60 503.2956876608167 1004.5768223884334 2 503.2957641482353 MULTI CID FTMS 0 0 0 5120 5504886.5 0.9109389475467892 1 -0.069711685180664 2 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 47.74868867922204 0.0453060283459952 1 VPHTR[VP]S{I|L} 9 0 + 69.785 0.0 0.0 6.9467 6.9467 95.174 0.0 0.0 0.0 58.002603108641765 0.2551328462803326 0.2551328462803326 30.016894462103984 0 0.7059771852360797 1.6989700043360187 1.174742501084005 0.0 + + VPHTR[VP]S{I|L};VP{I|L}[W{I|L}][HQ]{I|L} 6.9467;3.9587 +;- + 95 + 1 2.109 53975.1 1.0 1810 3310 5120 DOHH2_400M_050219_1,5122 DOHH2_400M_050219_1,5122,VPHTRPVSL True True VPHTRPVSL 27.459465 503.295764148235 177423248.0 5120.0 ENST00000412609.5_1_19:40170059-40174276:+|nuORF 8.652608394622803 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5123 27.462 100.0 495680.0 25 0 25294.0 + -1 SRPDSILGMQF 11 84 633.810681756521 1265.606810579842 2 633.8110229372978 MULTI CID FTMS 0 0 0 5120 623818.5625 0.137015576876509 -2 0.2250823974609375 3 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 26.268140514670165 0.4754186812857754 1 [KQ]{I|L}QEQA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 10 -1 + 61.908 0.0 0.0 4.8915 4.8915 74.469 0.0 0.0 0.0 1.1263423094075478 0.7918124604762511 0.7918124604762511 1.1263423094075478 0 0.7059771852360797 0.0 0.3807196863200844 1.9436726795685344 [KQ]{I|L}QEQA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[Q{I|L}]KQEQA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[KQ]{I|L}QE[AG]A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[KQ]{I|L}[AG]EQA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[Q{I|L}]QKEQA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[KQ]{I|L}[AG]E[AG]A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[Q{I|L}]K[AG]E[AG]A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[Q{I|L}]QKE[AG]A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.8915;4.8025;4.1674;4.1674;4.0784;4.0784;4.0451;3.4461;3.3571;3.3209 -;-;-;-;-;-;-;-;-;- 638 1 2.109 45390.1 1.0 1811 3310 5120 DOHH2_400M_050219_1,5123 DOHH2_400M_050219_1,5123,SRPDSILGMQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5124 27.464 116.0 797710.0 25 0 44343.0 + 7195 EEQLQQIRAE 10 103 622.3178878041524 1242.6212226751047 2 622.3176757693291 MULTI CID FTMS 0 0 0 5120 538841.5 0.4983709159889318 -2 0.2250823974609375 4 Unmodified _EEQLQQIRAE_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 47.7319792270244 0.0934623409360514 1 EEQ{I|L}QQ{I|L}RAE 10 0 + 70.499 0.0 0.0 5.6734 5.6734 85.941 0.0 0.0 0.0 57.90243751166993 10.674100046527355 10.674100046527355 9.164539485499256 0 0.3807196863200844 1.154901959985743 0.7742275032520141 1.1237125054200234 + + EEQ{I|L}QQ{I|L}RAE;EE[AG]{I|L}QQ{I|L}RAE;EEQ{I|L}[AG]Q{I|L}RAE;EEQ{I|L}Q[AG]{I|L}RAE;EEQ{I|L}[AG][AG]{I|L}RAE;EE[AG]{I|L}[AG]Q{I|L}RAE;EE[AG]{I|L}Q[AG]{I|L}RAE;[VP][YK]QQ{I|L}Q[HC];[VP][YK][AG]Q{I|L}Q[HC];[VP][YK]Q[AG]{I|L}Q[HC] 5.6734;4.9359;4.9359;4.9359;4.2013;4.2013;4.2013;2.9439;2.2063;2.2063 +;-;-;-;-;-;-;-;-;- + 268 + 1 2.109 71914.2 1.0 1812 3310 5120 DOHH2_400M_050219_1,5124 DOHH2_400M_050219_1,5124,EEQLQQIRAE True True EEQLQQIRAE 27.464077 622.317675769329 5560223.5 5120.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 4.953852653503418 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 5125 27.466 109.0 357040.0 25 0 21881.0 + 26597 NVPWTRTI 8 79 493.7725629377813 985.5305729423626 2 493.7724792361259 MULTI CID FTMS 0 0 0 5120 470415.03125 1.0 0 0.0 5 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 28.486842064014134 0.4448922141344407 1 {[NV]|[RG]}RNVGNT{I|L} 9 -1 + 40.881 0.0 0.0 4.1481 4.1481 74.242 0.0 0.0 0.0 2.3764301679958777 23.256434167410728 2.3764301679958777 3.010299956639805 0 1.1549471895720984 0.0 0.0 0.0 {[NV]|[RG]}RNVGNT{I|L};AAARNVGNT{I|L};{[NV]|[RG]}RGGVGNT{I|L};{[NV]|[RG]}RNVGGGT{I|L};AAARNVGGGT{I|L};AAARGGVGNT{I|L};{[NV]|[RG]}RGGVGGGT{I|L};{[TV]|[{I|L}S]}[WP]VGNT{I|L};AAARGGVGGGT{I|L};{[TV]|[{I|L}S]}[WP]RNT{I|L} 4.1481;3.8427;3.2138;3.2138;2.9128;2.9128;2.2839;2.0762;1.9865;1.4189 -;-;-;-;-;-;-;-;-;- 214 1 2.109 38362.2 1.0 1813 3310 5120 DOHH2_400M_050219_1,5125 DOHH2_400M_050219_1,5125,NVPWTRTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5126 27.469 115.0 670060.0 25 0 40273.0 19257 LEKFRKEQL 9 100 397.56821952755695 1189.6828291828708 3 397.5680114626884 MULTI CID FTMS 0 0 0 5120 400866.78125 1.0 0 0.0 6 Unmodified _LEKFRKEQL_ ENSG00000071205|ENST00000336498|ARHGAP10;ENST00000510379.1_1_4:148653338-148778808:+|nuORF 13.042465956692816 0.4836390050082244 1 P{I|L} 2 8 14.949 0.0 0.0 1.2565 0.0 0.0 961.5345117774006 0.0 961.5345117774006 0.0 2.1842903735120345 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L} 1.2565 - 58 + 1 2.109 64684.9 1.0 1814 3310 5120 DOHH2_400M_050219_1,5126 DOHH2_400M_050219_1,5126,LEKFRKEQL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5127 27.472 135.0 421660.0 25 0 41316.0 + 32713 SEALGDNVKQY 11 82 612.2987016620174 1222.582850390835 2 612.2994262576103 MULTI CID FTMS 0 0 0 5120 380949.21875 1.0 0 0.0 7 Unmodified _SEALGDNVKQY_ ENSG00000152382|ENST00000367874|TADA1 53.31671820480216 0.0992620867501809 1 {[ES]|[DT]|[{I|L}C]}A{I|L}[YG][RH]QY 10 4 + 35.072 0.0 0.0 2.8686 2.8686 82.54 0.0 0.0 0.0 8.116042352767735 5.211937088119395 5.211937088119395 35.071589370896405 0 1.66944517631652 0.0 0.0 0.7742275032520141 {[ES]|[DT]|[{I|L}C]}A{I|L}[YG][RH]QY 2.8686 - 69 + 1 2.109 47532.7 1.0 1815 3310 5120 DOHH2_400M_050219_1,5127 DOHH2_400M_050219_1,5127,SEALGDNVKQY True True SEALGDNVKQY 27.471532 612.29942625761 1800623.125 5120.0 ENSG00000152382|ENST00000367874|TADA1 6.9777296384175616 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5128 27.474 147.0 453630.0 25 0 64625.0 + 9032 FDRWHNVY 8 79 568.7660098072146 1135.517466681229 2 568.7662841677666 MULTI CID FTMS 0 0 0 5120 355495.96875 1.0 0 0.0 8 Unmodified _FDRWHNVY_ REV__ENSG00000171495|ENST00000399564|MROH2B 12.531546534597751 0.7257836412119636 1 VY 2 -1 27.519 0.0 0.0 2.4234 0.0 0.0 855.374322005251 0.0 855.374322005251 0.0 20.52887198244136 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 VY 2.4234 + + 59 + 1 2.109 55313.6 1.0 1816 3310 5120 DOHH2_400M_050219_1,5128 DOHH2_400M_050219_1,5128,FDRWHNVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5129 27.479 256.0 385570.0 25 0 49240.0 + 7169 EEPPSKPSF 9 109 509.2485762612772 1016.4825995893544 2 509.2487670779228 MULTI CID FTMS 0 0 0 5120 244417.25 1.0 0 0.0 9 Unmodified _EEPPSKPSF_ ENSG00000186185|ENST00000593135|KIF18B;nc|ENSG00000186185|Q86Y91-6|KIF18B 26.268140514670165 0.1969607489560049 1 EEPPSK{M(Oxidation (M))|F}SP 9 2 + 66.091 0.0 0.0 6.502 6.502 91.484 0.0 0.0 0.0 45.96738809850304 6.70093876599789 6.70093876599789 12.385119509854787 0 0.3807196863200844 2.0 0.6989700043360187 0.0 EEPPSK{M(Oxidation (M))|F}SP;EEPPSK[PS]{M(Oxidation (M))|F};EEP{[VA]|[{I|L}G]}AA{M(Oxidation (M))|F}SP;EEPY[Q{I|L}]PAA;EEP{[VA]|[{I|L}G]}[EC]K{I|L};EEPY[Q{I|L}]AAP;EEP{[VA]|[{I|L}G]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAA;EEP{[VA]|[{I|L}G]}[YN]VP;[PS]KP[PS]{M(Oxidation (M))|F}EE;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Q{I|L}]YP[HC] 6.502;5.2836;3.4553;2.1031;1.7437;1.6106;1.5372;1.3364;1.3056;0.96567 -;+;-;-;-;-;-;-;-;- + 330 + 1 2.109 82545.8 1.0 1817 3310 5120 DOHH2_400M_050219_1,5129 DOHH2_400M_050219_1,5129,EEPPSKPSF False True EEPPSKPSF 27.479234 509.248767077923 5976889.5 5120.0 ENSG00000186185|ENST00000593135|KIF18B;;nc|ENSG00000186185|Q86Y91-6|KIF18B 5.682676235834758 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5130 27.483 213.0 564350.0 25 0 39912.0 + 5422 DLLRKDKEL 9 121 377.2244960131068 1128.6516586395203 3 377.2241393923759 MULTI CID FTMS 0 0 0 5120 233774.453125 1.0 0 0.0 10 Unmodified _DLLRKDKEL_ ENSG00000160075|ENST00000291386|SSU72;ENST00000378725.3_1_1:1480120-1509937:-|nuORF;nc|ENSG00000160075|Q9NP77-2|SSU72 32.037481411007896 0.1235546156350648 1 D{I|L}{I|L}{M(Oxidation (M))|F} 4 6 51.815 0.0 0.0 4.5909 0.0 0.0 0.0 637.3790305253927 637.3790305253927 36.24196130364324 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 D{I|L}{I|L}{M(Oxidation (M))|F} 4.5909 - 77 + 1 2.109 99486.6 1.0 1818 3310 5120 DOHH2_400M_050219_1,5130 DOHH2_400M_050219_1,5130,DLLRKDKEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5131 27.497 800.0 216410.0 25 0 15085.0 + 7136 EENFPENKEY 10 163 649.7802727901433 1297.5459926470865 2 649.7797729372978 MULTI CID FTMS 0 0 0 5120 198462.40625 0.5921244465147034 -9 0.4341640472412109 11 Unmodified _EENFPENKEY_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 61.08992128646608 0.0337271188422265 1 EEN{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}PEN 9 5 67.299 0.0 0.0 5.1867 0.0 0.0 0.0 125.07250391177968 125.07250391177968 33.93440430594271 0.0 0.0 0.0 0 1.1307196863200843 1.3010299956639813 1.1549471895720984 1.024227503252014 EEN{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}PEN 5.1867 - 4129 + 1 2.109 134801.2 0.8700000047683716 1819 3310 5120 DOHH2_400M_050219_1,5131 DOHH2_400M_050219_1,5131,EENFPENKEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5132 27.511 800.0 132860.0 25 0 28796.0 + -1 RRMKCHENR 9 109 643.8170892748931 1285.619625616586 2 643.8174926638603 MULTI CID FTMS 0 0 0 5120 147527.3125 1.0 0 0.0 12 Carbamidomethyl (C) _RRMKC(Carbamidomethyl (C))HENR_ REV__ENSG00000138347|ENST00000358913|MYPN;REV__nc|ENSG00000138347|Q86TC9-2|MYPN 6.723162845929126 0.6799819581413107 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}NC(Carbamidomethyl (C)) 7 -1 19.685 0.0 0.0 1.5312 0.0 0.0 0.0 440.2161043756469 440.2161043756469 7.46661994673893 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}NC(Carbamidomethyl (C)) 1.5312 - 336 + 1 2.109 79974.9 0.7799999713897705 1820 3310 5120 DOHH2_400M_050219_1,5132 DOHH2_400M_050219_1,5132,RRMKCHENR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5133 27.517 336.0 306780.0 25 0 28416.0 + + 13563 PHTRPVSL 8 139 454.2634600103999 906.5123670875998 2 454.2630187869072 MULTI CID FTMS 0 0 0 5120 95674.1875 0.9802602325496323 2 -0.1371784210205078 13 Unmodified _HPGKMIPK_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 2.889219685676258 0.8067950007271085 1 HT 2 -1 22.276 0.0 0.0 2.4574 0.0 0.0 98.05701864055727 567.3278902643186 665.3849089048759 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.805462187404089 0.0 HT 2.4574 - 79 + 1 2.109 83302.6 1.0 1821 3310 5120 DOHH2_400M_050219_1,5133 DOHH2_400M_050219_1,5133,HPGKMIPK False False PHTRPVSL 27.517015 454.263018786907 1387460.375 5120.0 ENST00000412609.5_1_19:40170059-40174276:+|nuORF 1.7204326391220093 2.0 False 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 5134 27.523 351.0 258880.0 25 0 60424.0 + 6320 DVIQKGSSL 9 119 473.7639782880635 945.5134036429272 2 473.7638122439384 MULTI CID FTMS 0 0 0 5120 141904.984375 0.2027107820331202 1 -0.069711685180664 14 Unmodified _DVIQKGSSL_ ENSG00000130695|ENST00000451429|CEP85;nc|ENSG00000130695|Q6P2H3|CEP85 47.74868867922204 0.0453060283459952 1 [DV]{I|L}Y{I|L}QE 7 6 52.985 0.0 0.0 5.6039 0.0 0.0 0.0 82.06701837711171 82.06701837711171 40.5109129268085 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.9436726795685344 0.3807196863200844 [DV]{I|L}Y{I|L}QE 5.6039 - 205 + 1 2.109 73044.9 1.0 1822 3310 5120 DOHH2_400M_050219_1,5134 DOHH2_400M_050219_1,5134,DVIQKGSSL True True DVIQKGSSL 27.523352 473.763812243938 3837222.75 5120.0 ENSG00000130695|ENST00000451429|CEP85;;nc|ENSG00000130695|Q6P2H3|CEP85 3.220326582590739 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5136 27.528 22.0 1517200.0 25 0 128570.0 + 38453 TSDDVKEQIY 10 65 599.285161667328 1196.555770401456 2 599.2850829958916 MULTI CID FTMS 0 0 0 5135 2216436.25 0.4405243692608697 1 -0.0674667358398437 1 Unmodified _TSDDVKEQIY_ ENSG00000110700|ENST00000525634|RPS13;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000534329.1_1_11:17098694-17099257:-|nuORF 38.17557092003332 0.1768326257063233 1 {I|L}Y 2 8 25.969 0.0 0.0 2.1703 0.0 0.0 902.3975805594622 0.0 902.3975805594622 0.0 12.01667520279372 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}Y 2.1703 + + 20 + 1 2.109 30972.1 1.0 1823 3311 5135 DOHH2_400M_050219_1,5136 DOHH2_400M_050219_1,5136,TSDDVKEQIY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5137 27.533 274.0 356780.0 25 0 38042.0 + 36896 TEQPPPRSW 9 114 549.2725246039536 1096.530496274707 2 549.2725097537041 MULTI CID FTMS 0 0 0 5135 207457.40625 0.515411883117851 2 -0.0772113800048828 2 Unmodified _TEQPPPRSW_ ENSG00000113300|ENST00000261951|CNOT6 66.45667989310934 0.0225072657982126 1 [AG][YR]PPPQ[DP] 10 7 + 45.155 0.0 0.0 4.118 4.118 71.141 0.0 0.0 0.0 0.5979781942582889 0.5979781942582889 0.5979781942582889 0.5979781942582889 0 1.0 2.0 0.0 0.7742275032520141 [AG][YR]PPPQ[DP];{[ET]|[MV]}QPP[WR][PS];{[ET]|[MV]}[WK]PPQ[DP];[AG][YR]PPP[AG][DP];{[DS]|[MA]|[CV]|TT}[WR]PP[AG][DP];{[ET]|[MV]}[WK]PP[AG][DP];[AG][YR][YK]Q[DP];{[ET]|[MV]}Q{[{M(Oxidation (M))|F}H]|[RQ]}[H{I|L}]W;[PS][RN]{[{M(Oxidation (M))|F}H]|[RQ]}Q[DP];{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}H]|[RQ]}Q[DP] 4.118;4.0634;3.8899;3.2822;3.2237;3.0502;2.3613;2.3389;1.9592;1.8529 -;-;-;-;-;-;-;-;-;- 333 1 2.109 78514.5 1.0 1824 3311 5135 DOHH2_400M_050219_1,5137 DOHH2_400M_050219_1,5137,TEQPPPRSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5138 27.536 118.0 396330.0 25 0 34238.0 + 326 AEAETEKWCNY 11 79 448.5247187648846 1342.552326894854 3 448.5250732302666 MULTI CID FTMS 0 0 0 5135 352137.625 0.8565987437914401 1 -0.0674667358398437 3 Unmodified _AEAETEKWCNY_ REV__DENND3|p.K1131Rfs*22|1|0.3|ENSG00000105339|chr8:141192654-141192655|-/AA|frameshift_variant;REV__ENSG00000105339|ENST00000519811|DENND3;REV__ENST00000520482.1_1_8:142168222-142185717:+|nuORF;REV__nc|ENSG00000105339|A2RUS2-2|DENND3;REV__nc|ENSG00000105339|A2RUS2|DENND3 3.2813086475875832 0.8596665074481906 1 {I|L}K[Y{I|L}]TY 6 -1 25.406 0.0 0.0 1.8924 0.0 0.0 543.1071497481727 0.0 543.1071497481727 0.0 13.623338504838625 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}K[Y{I|L}]TY 1.8924 - 50 + 1 2.109 44211.8 1.0 1825 3311 5135 DOHH2_400M_050219_1,5138 DOHH2_400M_050219_1,5138,AEAETEKWCNY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5139 27.538 128.0 459550.0 25 0 55901.0 + 32435 SADPDNLKY 9 95 511.74461123083984 1021.4746695284796 2 511.7433959841728 MULTI CID FTMS 0 0 0 5135 305971.90625 0.3103695911817526 -3 0.2947940826416015 4 Unmodified _SADPDNLKY_ ENSG00000157106|ENST00000446231|SMG1 26.268140514670165 0.1969607489560049 1 {[SA]|[TG]}DPD{[QV]|[N{I|L}]|[RA]|[KV]}KY 9 0 + 54.899 0.0 0.0 5.3745 5.3745 81.226 0.0 0.0 0.0 23.48599459218456 7.324025793069708 7.324025793069708 5.228787452803374 0 0.9247425010840048 2.0 0.0 0.0 + + {[SA]|[TG]}DPD{[QV]|[N{I|L}]|[RA]|[KV]}KY;{[SA]|[TG]}DPD[RK]AY 5.3745;4.8626 +;- + 244 + 1 2.109 49560.9 1.0 1826 3311 5135 DOHH2_400M_050219_1,5139 DOHH2_400M_050219_1,5139,SADPDNLKY False True SADPDNLKY 27.538135 511.743395984173 10032370.0 5135.0 ENSG00000157106|ENST00000446231|SMG1 8.286107540130615 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5140 27.544 314.0 285120.0 25 0 33454.0 + -1 FDQGCEECTY 10 115 626.2179362180962 1250.4213195029922 2 626.2180663943291 MULTI CID FTMS 0 0 0 5135 295672.03125 0.4131375442731346 -1 0.069711685180664 5 Carbamidomethyl (C) _FDQGC(Carbamidomethyl (C))EECTY_ REV__ENSG00000185177|ENST00000319636|ZNF479 21.53697664764585 0.484802182336468 1 QTYETY 6 -1 64.686 0.0 0.0 5.1731 0.0 0.0 447.0884571759781 0.0 447.0884571759781 0.0 31.68366291575822 0.0 0.0 0 0.5 0.0 0.6505149978319906 1.6549471895720984 QTYETY 5.1731 - 597 1 2.109 69170.2 1.0 1827 3311 5135 DOHH2_400M_050219_1,5140 DOHH2_400M_050219_1,5140,FDQGCEECTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5141 27.558 800.0 128320.0 25 0 6571.1 36733 TDSDEDIRETY 11 144 672.2833782485519 1342.5522035639035 2 672.2848388552666 MULTI CID FTMS 0 0 0 5135 211298.375 0.947825197126336 3 -0.12847900390625 6 Unmodified _TDSDEDIRETY_ ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A 11.494710602746466 0.7960433852372589 1 [TA][QP]C(Carbamidomethyl (C))N{M(Oxidation (M))|F}{I|L}TEY 11 8 + 40.35 0.0 0.0 3.0055 3.0055 73.942 0.0 0.0 0.0 5.436560550903394 9.375758612822054 5.436560550903394 5.436560550903394 0 0.5924778212679485 0.4685210829577448 1.274227503252014 0.9049471895720984 [TA][QP]C(Carbamidomethyl (C))N{M(Oxidation (M))|F}{I|L}TEY;[YT][HQ][DC]A{I|L}TEY;[YT][HQ]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}TEY;[YT][HQ]{[DS]|[MA]|[CV]|TT}EATEY;[NP][VS]C(Carbamidomethyl (C))N{M(Oxidation (M))|F}{I|L}TEY;[TA][QP]C(Carbamidomethyl (C))N{M(Oxidation (M))|F}{I|L}E[YT];[PG]G[VS]C(Carbamidomethyl (C))N{M(Oxidation (M))|F}{I|L}TEY;[YT][HQ][DC]{I|L}ATEY;[YT][HQ][DC]A{I|L}E[YT];[YT][HQ]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}E[YT] 3.0055;2.6005;2.5592;2.373;2.3505;2.3071;2.0478;1.9246;1.9022;1.8608 -;-;-;-;-;-;-;-;-;- 812 1 2.109 77363.1 0.8600000143051147 1828 3311 5135 DOHH2_400M_050219_1,5141 DOHH2_400M_050219_1,5141,TDSDEDIRETY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5142 27.572 800.0 211920.0 25 0 42392.0 -1 0 64 1197.1605940672669 3588.4599528020008 3 1197.494677722454 MULTI CID FTMS 0 0 0 5135 195954.609375 0.7385757780310677 -2 0.1805877685546875 7 1 SY{I|L}QEKVY 8 -1 45.003 0.0 0.0 1.2541 0.0 0.0 2322.8555349326634 252.0524996393188 2574.908034571982 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.4247425010840047 SY{I|L}QEKVY 1.2541 - 406 + 1 2.109 124218.0 0.6200000047683716 1829 3311 5135 DOHH2_400M_050219_1,5142 DOHH2_400M_050219_1,5142, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5143 27.577 295.0 398770.0 25 0 83411.0 -1 0 143 472.2745212519357 471.2672447853357 1 472.2728759646416 MULTI CID FTMS 0 0 0 5135 183052.96875 0.2414967127856781 -19 0.8877544403076172 8 1 [DP]{I|L}K 4 -1 + 18.082 0.0 0.0 3.8369 3.8369 70.631 0.0 0.0 0.0 0.9151498112134996 6.61622501717439 0.9151498112134996 0.9151498112134996 0 0.0 0.9208187539523752 0.0 0.0 [DP]{I|L}K;[VP]EK;[PS][VG]{I|L} 3.8369;3.6427;0.37147 -;-;- 85 1 2.109 92427.7 1.0 1830 3311 5135 DOHH2_400M_050219_1,5143 DOHH2_400M_050219_1,5143, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5144 27.591 800.0 138560.0 25 0 7361.4 + 5863 DPWRWLRAY 9 151 421.5506360135578 1261.6300786408735 3 421.5503723025322 MULTI CID FTMS 0 0 0 5135 94868.8359375 0.2981834526897678 2 -0.0772113800048828 9 Unmodified _DPWRWLRAY_ REV__ENSG00000141646|ENST00000342988|SMAD4;REV__ENST00000589706.1_1_18:48573554-48575699:+|nuORF;REV__ENST00000590722.2_1_18:48573416-48579019:+|nuORF 5.296884461304476 0.7297726132274777 1 APS{M(Oxidation (M))|F} 4 -1 19.857 0.0 0.0 1.5739 0.0 0.0 841.4351941324474 0.0 841.4351941324474 0.0 5.252443924689704 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 APS{M(Oxidation (M))|F} 1.5739 - 158 + 1 2.109 94198.7 0.4600000083446502 1831 3311 5135 DOHH2_400M_050219_1,5144 DOHH2_400M_050219_1,5144,DPWRWLRAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5146 27.599 220.0 228550.0 25 0 22118.0 + 32439 SADPGNLKY 9 82 482.7402897420301 0 482.7402831912041 PEAK CID FTMS 0 0 0 5145 183432.34375 0.1422923934408489 3 -0.1131515502929687 1 Unmodified _SADPGNLKY_ ENST00000522841.6_1_16:21481075-21531198:-|nuORF 20.453626601364224 0.1969592619112565 1 D 1 8 12.881 0.0 0.0 1.337 0.0 0.0 690.3692705314842 155.04647241763908 845.4157429491232 0.0 0.0 0.0 0.0 0 0.5 0.0 0.2396518287104437 0.0 + D 1.337 + + 45 + 1 2.11 45257.6 1.0 1832 3312 5145 DOHH2_400M_050219_1,5146 DOHH2_400M_050219_1,5146,SADPGNLKY False True SADPGNLKY 27.5987 482.740283191204 7506710.0 5145.0 ENST00000522841.6_1_16:21481075-21531198:-|nuORF 4.531353871027629 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5147 27.6 77.0 402670.0 25 0 30047.0 + 33142 SEVILHHEY 9 77 563.7809740441552 1125.5473951551105 2 563.7802612185478 MULTI CID FTMS 0 0 0 5145 267437.8125 0.1222719024468525 3 -0.1131515502929687 2 Unmodified _SEVILHHEY_ ENSG00000144028|ENST00000323853|SNRNP200 18.373094154950223 0.3393451798331396 1 [DV]T 3 8 25.686 0.0 0.0 2.2821 0.0 0.0 0.0 807.3823310284102 807.3823310284102 11.5836249209525 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [DV]T 2.2821 - 36 1 2.11 30245.2 1.0 1833 3312 5145 DOHH2_400M_050219_1,5147 DOHH2_400M_050219_1,5147,SEVILHHEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5149 27.605 63.0 881280.0 25 0 78687.0 + 33068 SEQSLGQKL 9 86 495.2667330355992 988.5189131379984 2 495.2666503787041 MULTI CID FTMS 0 0 0 5148 987341.75 0.5492678337952327 -2 0.0772113800048828 1 Unmodified _SEQSLGQKL_ ENSG00000104738|ENST00000649973|MCM4 88.95385435242217 0.0153473310052057 1 {[ES]|[DT]|[{I|L}C]}QS{I|L}{[QG]|[NA]}K{I|L} 9 0 + 52.4 0.0 0.0 5.3008 5.3008 85.352 0.0 0.0 0.0 39.33509177444998 3.997199140551473 3.997199140551473 9.208187539523747 0 1.1549471895720984 0.0 0.9247425010840048 0.75 + + {[ES]|[DT]|[{I|L}C]}QS{I|L}{[QG]|[NA]}K{I|L};{[ES]|[DT]|[{I|L}C]}[AG]S{I|L}{[QG]|[NA]}K{I|L};{[MG]|[TS]}KK{I|L}SYY;{[QG]|[NA]}{I|L}S[K{I|L}]Q{[ES]|[DT]|[{I|L}C]};{[QG]|[NA]}{I|L}S[K{I|L}]E{[QS]|[NT]};{[TV]|[{I|L}S]}{[QG]|[NA]}[K{I|L}]Q{[ES]|[DT]|[{I|L}C]};{[TV]|[{I|L}S]}{[QG]|[NA]}[K{I|L}]E{[QS]|[NT]} 5.3008;4.3693;3.8404;0.46133;0.40971;0.34186;0.29023 +;-;-;-;-;-;- + 139 + 1 2.11 49334.0 1.0 1834 3313 5148 DOHH2_400M_050219_1,5149 DOHH2_400M_050219_1,5149,SEQSLGQKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5150 27.607 81.0 543440.0 25 0 38646.0 + -1 GVVTDMFTAI 10 84 535.2670612040412 1068.5195694748822 2 535.2672607302666 MULTI CID FTMS 0 0 0 5148 790814.6875 0.0363103813024293 5 -0.2085456848144531 2 Oxidation (M) _GVVTDM(Oxidation (M))FTAI_ REV__ENSG00000164659|ENST00000450689|ELAPOR2 32.30548876998284 0.2428506522065767 1 QDTRGTA{I|L} 8 -1 55.654 0.0 0.0 5.2085 0.0 0.0 208.0851917951188 0.0 208.0851917951188 0.0 41.67480748626268 0.0 0.0 0 2.473197507588033 0.0 0.4247425010840047 0.0 QDTRGTA{I|L} 5.2085 - 161 1 2.11 40758.8 1.0 1835 3313 5148 DOHH2_400M_050219_1,5150 DOHH2_400M_050219_1,5150,GVVTDMFTAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5151 27.611 222.0 389760.0 25 0 44506.0 + -1 PEMKIIIRK 9 89 381.9017834846883 1142.683521054265 3 381.9017516970634 MULTI CID FTMS 0 0 0 5148 193324.90625 0.5992622553423765 -1 0.009744644165039 3 Oxidation (M) _PEM(Oxidation (M))KIIIRK_ REV__ENSG00000126804|ENST00000683701|ZBTB1;REV__nc|ENSG00000126804|Q9Y2K1-2|ZBTB1 7.101721422024254 0.6667666702315642 1 {M(Oxidation (M))|F}[EP]K{I|L}K[R{I|L}]{I|L} 9 -1 + 27.113 0.0 0.0 2.3728 2.3728 81.255 0.0 0.0 0.0 10.9151498112135 0.2018122933698443 0.2018122933698443 27.11303739409744 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[EP]K{I|L}K[R{I|L}]{I|L} 2.3728 - 32 + 1 2.11 74298.1 1.0 1836 3313 5148 DOHH2_400M_050219_1,5151 DOHH2_400M_050219_1,5151,PEMKIIIRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5152 27.618 386.0 385860.0 25 0 80084.0 40148 VGLVVPLPG 9 128 425.77483004368935 849.5351071541787 2 425.7746459841728 MULTI CID FTMS 0 0 0 5148 191618.09375 0.8390626188783304 -2 0.0772113800048828 4 Unmodified _VGLVVPLPG_ ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3 2.302733041254933 0.8342969208511092 1 Y 1 9 11.42 0.0 0.0 1.3443 0.0 0.0 668.4612678981225 0.0 668.4612678981225 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3443 - 19 + 1 2.11 118023.8 1.0 1837 3313 5148 DOHH2_400M_050219_1,5152 DOHH2_400M_050219_1,5152,VGLVVPLPG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5153 27.632 800.0 166470.0 25 0 9057.4 + 24351 MENIHSEMY 9 159 585.2336884357396 1168.4528239382792 2 585.2339355349541 MULTI CID FTMS 0 0 0 5148 123402.2421875 0.8429740188421165 1 -0.0512676239013671 5 Oxidation (M) _M(Oxidation (M))ENIHSEMY_ ENSG00000171848|ENST00000304567|RRM2;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 63.960520009940105 0.0238892913700936 1 [{I|L}T]EC(Carbamidomethyl (C))HSEMY 9 4 + 77.234 0.0 0.0 6.6099 6.6099 89.816 0.0 0.0 0.0 9.247425010840049 16.478174818886373 9.247425010840049 9.208187539523747 0 1.424742501084005 1.5228787452803376 0.9163865622122672 0.0 [{I|L}T]EC(Carbamidomethyl (C))HSEMY;[{I|L}T]E[CG]HSEMY;[{M(Oxidation (M))|F}E]N{I|L}HSEMY;[{M(Oxidation (M))|F}E]GG{I|L}HSEMY;[DP][YQ]HSEMY;[{M(Oxidation (M))|F}E]AHRSEMY;[{M(Oxidation (M))|F}E]AGVHSEMY;{[ES]|[DT]|[{I|L}C]}WTHSEMY;{[ET]|[MV]}C(Carbamidomethyl (C)){I|L}HSEMY;{[ET]|[MV]}{I|L}C(Carbamidomethyl (C))HSEMY 6.6099;5.8218;5.8185;5.0304;4.9404;4.9397;4.9382;4.8519;4.783;4.6761 -;-;+;-;-;-;-;-;-;- + 2176 1 2.11 99398.4 0.6200000047683716 1838 3313 5148 DOHH2_400M_050219_1,5153 DOHH2_400M_050219_1,5153,MENIHSEMY True False MENIHSEMY 27.631977 585.233935534954 675293.1875 5148.0 ENSG00000171848|ENST00000304567|RRM2;;nc|ENSG00000171848|P31350-2|RRM2;;ENST00000491447.1_1_2:10262886-10264978:+|nuORF 8.406949043273926 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5154 27.646 800.0 137320.0 25 0 19783.0 + + 11406 DSYSSSRSDLY 11 104 640.277267984401 639.2699915178009 1 640.2755004763603 MULTI CID FTMS 0 0 0 5148 92622.5390625 0.7362451518061587 -2 0.0772113800048828 6 Unmodified _GGQGGAGH_ ENSG00000147274|ENST00000320676|RBMX;ENST00000568578.5_1_X:135956303-135956645:-|nuORF;nc|ENSG00000147274|P38159-2|RBMX;ENSG00000213516|ENST00000652648|RBMXL1 0.0 0.8243325171867699 1 {I|L}Y 2 -1 16.454 0.0 0.0 2.5738 0.0 0.0 345.11204581643216 0.0 345.11204581643216 0.0 4.825411062705474 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y 2.5738 - 63 + 1 2.11 84207.8 0.5600000023841858 1839 3313 5148 DOHH2_400M_050219_1,5154 DOHH2_400M_050219_1,5154,GGQGGAGH False False DSYSSSRSDLY 27.645814 640.27550047636 742322.6875 5148.0 ENSG00000147274|ENST00000320676|RBMX;;ENST00000568578.5_1_X:135956303-135956645:-|nuORF;;nc|ENSG00000147274|P38159-2|RBMX;;ENSG00000213516|ENST00000652648|RBMXL1 9.459117571512856 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5155 27.652 322.0 292930.0 25 0 24272.0 -1 0 130 532.2978919855241 531.290615518924 1 532.2963744997978 MULTI CID FTMS 0 0 0 5148 192436.484375 0.3765240883443412 28 -1.1963138580322266 7 1 Q 1 -1 11.203 0.0 0.0 2.1087 0.0 0.0 385.2211860529068 0.0 385.2211860529068 0.0 0.4900618278623181 0.0 0.0 0 0.0 0.0 0.0 0.1022338482433752 Q 2.1087 - 28 + 1 2.11 76678.5 1.0 1840 3313 5148 DOHH2_400M_050219_1,5155 DOHH2_400M_050219_1,5155, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5157 27.656 31.0 1129000.0 25 0 89952.0 + 23427 LTEQYNEQY 9 69 594.2645695515978 1186.5145861699957 2 594.2647582888603 MULTI CID FTMS 0 0 0 5156 1496746.125 0.0971441792751062 4 -0.1572780609130859 1 Unmodified _LTEQYNEQY_ ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 25.399314129420983 0.2080152500878129 1 [AG]YEN 5 7 20.731 0.0 0.0 1.7472 0.0 0.0 0.0 649.2831768284517 649.2831768284517 0.1574903759687629 0.0 0.0 0.0 0 0.0 1.0 0.4247425010840047 0.3807196863200844 [AG]YEN 1.7472 - 317 1 2.11 30269.7 1.0 1841 3314 5156 DOHH2_400M_050219_1,5157 DOHH2_400M_050219_1,5157,LTEQYNEQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5158 27.658 46.0 855470.0 25 0 48894.0 + 42378 VTDPEKLNNY 10 69 596.7958262286942 1191.5770995241885 2 596.7960693240166 MULTI CID FTMS 0 0 0 5156 1108878.125 0.7144106555526769 1 -0.0521392822265625 2 Unmodified _VTDPEKLNNY_ ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L 53.832793166522166 0.0576554960245129 1 {[TV]|[{I|L}S]}[PG]{I|L}NDYD[KA] 11 7 + 58.76 0.0 0.0 4.9313 4.9313 75.634 0.0 0.0 0.0 20.24791088306234 23.149769711264447 20.24791088306234 1.7609125905568137 0 0.5 2.0 0.6549471895720984 0.0 {[TV]|[{I|L}S]}[PG]{I|L}NDYD[KA];{[TV]|[{I|L}S]}[PG]{I|L}DNYD[KA];{[TV]|[{I|L}S]}D[PG]{I|L}NYD[KA];{[TV]|[{I|L}S]}[PG]{I|L}GGDYD[KA];{[TV]|[{I|L}S]}[PG]D{I|L}NYD[KA];{[TV]|[{I|L}S]}[PG]{I|L}DGGYD[KA];{[TV]|[{I|L}S]}D[PG]{I|L}GGYD[KA];{[TV]|[{I|L}S]}[PG]{I|L}ND{[TV]|[{I|L}S]}[YN];{[TV]|[{I|L}S]}[PG]{I|L}DN{[TV]|[{I|L}S]}[YN];{[TV]|[{I|L}S]}[PG]D{I|L}GGYD[KA] 4.9313;4.7835;4.5286;4.1652;4.0898;4.0174;3.7625;3.7152;3.5674;3.3237 -;-;-;-;-;-;-;-;-;- 718 1 2.11 35320.8 1.0 1842 3314 5156 DOHH2_400M_050219_1,5158 DOHH2_400M_050219_1,5158,VTDPEKLNNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5159 27.66 89.0 818730.0 25 0 42924.0 4728 DEEMKEAAGSL 11 84 590.2660268757545 1178.517500818309 2 590.2667114138603 MULTI CID FTMS 0 0 0 5156 620939.5625 0.24245604251164 -3 0.12847900390625 3 Unmodified _DEEMKEAAGSL_ ENSG00000053254|ENST00000557258|FOXN3;nc|ENSG00000053254|O00409|FOXN3 22.65808497894818 0.560183898709508 1 QHVDAAEK 8 9 73.912 0.0 0.0 6.2716 0.0 0.0 282.0822724020964 0.0 282.0822724020964 0.0 63.21124409813045 0.0 0.0 0 3.1549471895720984 0.0 0.3807196863200844 0.6747425010840047 QHVDAAEK 6.2716 - 217 + 1 2.11 59842.4 1.0 1843 3314 5156 DOHH2_400M_050219_1,5159 DOHH2_400M_050219_1,5159,DEEMKEAAGSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5160 27.661 71.0 680230.0 25 0 89274.0 + 30468 REAEFTKSI 9 68 540.7873278713997 1079.5601028095994 2 540.7880126833916 MULTI CID FTMS 0 0 0 5156 472848.46875 0.660236101320075 -1 0.0512676239013671 4 Unmodified _REAEFTKSI_ ENSG00000118363|ENST00000263672|SPCS2 28.49450938151212 0.1686335738423394 1 {M(Oxidation (M))|F}TKS{I|L} 5 4 55.658 0.0 0.0 5.1557 0.0 0.0 485.2252133066167 0.0 485.2252133066167 0.0 42.47090423146982 0.0 0.0 0 1.1462566630072957 0.0 0.9247425010840048 0.0 + {M(Oxidation (M))|F}TKS{I|L} 5.1557 + + 187 1 2.11 42668.8 1.0 1844 3314 5156 DOHH2_400M_050219_1,5160 DOHH2_400M_050219_1,5160,REAEFTKSI False True REAEFTKSI 27.66141 540.788012683392 3877394.25 5156.0 ENSG00000118363|ENST00000263672|SPCS2 5.287166913350423 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5161 27.666 268.0 248230.0 25 0 10678.0 + 25418 NEDEDSPNKLY 11 112 662.2892339651546 1322.5639149971091 2 662.2899047732353 MULTI CID FTMS 0 0 0 5156 329428.34375 0.2557817204596415 4 -0.1572780609130859 5 Unmodified _NEDEDSPNKLY_ ENSG00000071082|ENST00000264258|RPL31;ENST00000480540.1_1_14:59261390-59261744:+|nuORF;nc|ENSG00000071082|P62899-2|RPL31;nc|ENSG00000071082|P62899-3|RPL31 78.11562728322046 0.0090580243971617 1 {[QD]|[EN]|[WG]|[KD]|[RS]}DEDS[NP]K{I|L}Y 11 0 + 64.589 0.0 0.0 4.8836 4.8836 76.816 0.0 0.0 0.0 2.976610141025688 2.976610141025688 2.976610141025688 2.976610141025688 0 3.0669015600442577 0.0 0.0 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}DEDS[NP]K{I|L}Y;[AG]DDEDS[NP]K{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NEDS[NP]K{I|L}Y;[AG]DDTDD[NP]K{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}DTDD[NP]K{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}DEDS[QA]{I|L}R{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGEDS[NP]K{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}DED[QA]S{I|L}R{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NTDD[NP]K{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SQDD[NP]K{I|L}Y 4.8836;4.6586;3.5278;3.1616;3.0663;2.9686;2.6303;2.1493;2.0309;1.1673 +;-;-;-;-;-;-;-;-;- + 860 + 1 2.11 54933.2 1.0 1845 3314 5156 DOHH2_400M_050219_1,5161 DOHH2_400M_050219_1,5161,NEDEDSPNKLY True True NEDEDSPNKLY 27.666378 662.289904773235 16638407.0 5156.0 ENST00000480540.1_1_14:59261390-59261744:+|nuORF;;ENSG00000071082|ENST00000264258|RPL31;;nc|ENSG00000071082|P62899-3|RPL31;;nc|ENSG00000071082|P62899-2|RPL31 8.415293216705322 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5162 27.677 609.0 166030.0 25 0 14435.0 + -1 TECGRSVLQ 9 132 525.253920615276 1048.493288297352 2 525.2540771365166 MULTI CID FTMS 0 0 0 5156 110795.625 1.0 0 0.0 6 Carbamidomethyl (C) _TEC(Carbamidomethyl (C))GRSVLQ_ REV__ENSG00000213445|ENST00000534313|SIPA1 27.628801355627647 0.1796483985696185 1 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q 8 -1 + 43.932 0.0 0.0 4.19 4.19 74.625 0.0 0.0 0.0 27.73387189888816 11.936974992327125 11.936974992327125 3.0102999566398125 0 0.9247425010840048 0.0 0.0 0.7059771852360797 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]{I|L}Q;W{[CA]|SS}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{[DA]|[EG]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}{[DA]|[EG]}[C(Carbamidomethyl (C))R]{I|L}Q;{[DA]|[EG]}RM[C(Carbamidomethyl (C))R]{I|L}Q;W[VG]M[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}W{[QD]|[EN]|[WG]|[KD]|[RS]}[VS]{I|L}Q;{[DS]|[MA]|[CV]|TT}Y[HT]W{I|L}Q;{[CA]|SS}V{[CP]|[EA]}[C(Carbamidomethyl (C))R]{I|L}Q 4.19;3.9029;3.5233;3.3066;3.0195;2.8567;2.8567;2.7877;2.7813;2.64 -;-;-;-;-;-;-;-;-;- 1238 + 1 2.11 82409.9 1.0 1846 3314 5156 DOHH2_400M_050219_1,5162 DOHH2_400M_050219_1,5162,TECGRSVLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5163 27.683 312.0 282280.0 25 0 29976.0 + 43353 WPGPSPAP 8 109 404.702438422726 807.390323912252 2 404.7029601931572 MULTI CID FTMS 0 0 0 5156 106537.59375 1.0 0 0.0 7 Unmodified _WPGPSPAP_ REV__ENST00000490199.2_1_9:35829937-35842629:+|nuORF 5.760428011301431 0.7893668129297577 1 [WP]E 3 -1 21.945 0.0 0.0 2.7181 0.0 0.0 0.0 392.1999605768188 392.1999605768188 6.460872158338837 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.0 0.0 [WP]E 2.7181 - 51 + 1 2.11 72378.5 1.0 1847 3314 5156 DOHH2_400M_050219_1,5163 DOHH2_400M_050219_1,5163,WPGPSPAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5164 27.697 800.0 186750.0 25 0 43371.0 + 31765 RSEEGRLYY 9 121 586.7885115413926 1171.5624701495851 2 586.7879516482353 MULTI CID FTMS 0 0 0 5156 107518.5625 1.0 0 0.0 8 Unmodified _RSEEGRLYY_ ENSG00000100916|ENST00000216807|BRMS1L;nc|ENSG00000100916|Q5PSV4-2|BRMS1L 28.49450938151212 0.1686335738423394 1 [VG]SEEC 6 7 31.41 0.0 0.0 2.681 0.0 0.0 0.0 564.3025788331149 564.3025788331149 13.451068594982589 0.0 0.0 0.0 0 1.110924374808178 1.2218487496163564 0.0 0.0 [VG]SEEC 2.681 - 145 + 1 2.11 114246.0 0.5799999833106995 1848 3314 5156 DOHH2_400M_050219_1,5164 DOHH2_400M_050219_1,5164,RSEEGRLYY False True RSEEGRLYY 27.696549 586.787951648235 602103.375 5156.0 nc|ENSG00000100916|Q5PSV4-2|BRMS1L;;ENSG00000100916|ENST00000216807|BRMS1L 7.756351153055827 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5165 27.701 255.0 214840.0 25 0 13496.0 35057 SQTLSMTSAE 10 115 527.7415214956287 1053.4684900580571 2 527.7379028201103 MULTI CID FTMS 0 0 0 5156 102758.1015625 0.992320009439575 -2 0.0610122680664062 9 Unmodified _SQTLSMTSAE_ ENSG00000128596|ENST00000297788|CCDC136;ENST00000480137.1_1_7:128441244-128446479:+|nuORF;nc|ENSG00000128596|Q96JN2-2|CCDC136;nc|ENSG00000128596|Q96JN2-3|CCDC136;nc|ENSG00000128596|Q96JN2-4|CCDC136 12.240655878213236 0.6421556946785427 1 {[QN]|[E{I|L}]|[KN]}S 3 8 18.451 0.0 0.0 1.7514 0.0 0.0 0.0 721.2859698766698 721.2859698766698 -0.322471636270297 0.0 -0.322471636270297 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}S 1.7514 - 330 1 2.11 48366.4 1.0 1849 3314 5156 DOHH2_400M_050219_1,5165 DOHH2_400M_050219_1,5165,SQTLSMTSAE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5166 27.704 123.0 333970.0 25 0 23104.0 + 32865 SEIAKEQGF 9 80 504.7536971896405 1007.492841446081 2 504.7538024783134 MULTI CID FTMS 0 0 0 5156 232834.0 1.0 0 0.0 10 Unmodified _SEIAKEQGF_ ENSG00000180228|ENST00000325748|PRKRA;nc|ENSG00000180228|O75569-2|PRKRA;nc|ENSG00000180228|O75569-3|PRKRA 18.1463463914782 0.3454829746528889 1 {[ES]|[DT]|[{I|L}C]}{I|L}A 4 5 20.445 0.0 0.0 2.0293 0.0 0.0 0.0 604.2735079400999 604.2735079400999 6.465912507003608 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}{I|L}A 2.0293 + + 49 + 1 2.11 40034.8 1.0 1850 3314 5156 DOHH2_400M_050219_1,5166 DOHH2_400M_050219_1,5166,SEIAKEQGF False True SEIAKEQGF 27.703826 504.753802478313 1121851.75 5156.0 nc|ENSG00000180228|O75569-2|PRKRA;;nc|ENSG00000180228|O75569-3|PRKRA;;ENSG00000180228|ENST00000325748|PRKRA 3.3165063858032227 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5168 27.709 138.0 473400.0 25 0 118110.0 + -1 FGLARAKSV 9 86 474.2893300330061 473.2820535664061 1 474.2881957888603 MULTI CID FTMS 0 0 0 5167 167342.953125 0.2089942866036795 -9 0.5949554443359375 1 nc|ENSG00000058091|O94921-2|CDK14;nc|ENSG00000117266|Q07002-3|CDK18;ENST00000504648.5_1_1:205492597-205500503:+|nuORF;ENST00000506489.1_1_1:205496975-205497827:+|nuORF;ENSG00000059758|ENST00000261211|CDK17;ENST00000505932.5_1_1:205492708-205498898:+|nuORF;nc|ENSG00000058091|O94921-3|CDK14;ENSG00000058091|ENST00000380050|CDK14;ENST00000489617.5_1_1:205496852-205498898:+|nuORF;ENSG00000117266|ENST00000429964|CDK18;ENST00000550971.5_1_12:96677414-96688846:-|nuORF;nc|ENSG00000059758|Q00537-2|CDK17 1 R{I|L} 2 -1 19.464 0.0 0.0 4.1125 0.0 0.0 0.0 201.06704126529533 201.06704126529533 7.870156338638594 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R{I|L} 4.1125 - 23 + 1 2.11 55109.4 1.0 1851 3315 5167 DOHH2_400M_050219_1,5168 DOHH2_400M_050219_1,5168, False False FGLARAKSV 27.709147 474.28819578886 1046935.5 5167.0 nc|ENSG00000058091|O94921-2|CDK14;;nc|ENSG00000117266|Q07002-3|CDK18;;ENST00000504648.5_1_1:205492597-205500503:+|nuORF;;ENST00000506489.1_1_1:205496975-205497827:+|nuORF;;ENSG00000059758|ENST00000261211|CDK17;;ENST00000505932.5_1_1:205492708-205498898:+|nuORF;;nc|ENSG00000058091|O94921-3|CDK14;;ENSG00000058091|ENST00000380050|CDK14;;ENST00000489617.5_1_1:205496852-205498898:+|nuORF;;ENSG00000117266|ENST00000429964|CDK18;;ENST00000550971.5_1_12:96677414-96688846:-|nuORF;;nc|ENSG00000059758|Q00537-2|CDK17 5.646082878112793 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5169 27.713 193.0 304160.0 25 0 45253.0 -1 LCLLVANVP 9 76 499.7908690304126 997.5671851276252 2 499.7915222048759 MULTI CID FTMS 0 0 0 5167 158173.96875 1.0 0 0.0 2 Carbamidomethyl (C) _LC(Carbamidomethyl (C))LLVANVP_ ENSG00000108506|ENST00000251334|INTS2;nc|ENSG00000108506|Q9H0H0|INTS2 12.531546534597751 0.4974689918368763 1 D{I|L}R 3 -1 43.188 0.0 0.0 4.3293 0.0 0.0 0.0 610.3311863180213 610.3311863180213 30.08864383480216 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 D{I|L}R 4.3293 - 56 + 1 2.11 50833.6 1.0 1852 3315 5167 DOHH2_400M_050219_1,5169 DOHH2_400M_050219_1,5169,LCLLVANVP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5170 27.715 116.0 638400.0 25 0 174070.0 20691 LLRNYRKA 8 77 517.3166805955854 1032.6188082579706 2 517.3175536990166 MULTI CID FTMS 0 0 0 5167 330377.53125 0.7479348115992679 -1 0.0521392822265625 3 Unmodified _LLRNYRKA_ ENSG00000121903|ENST00000684572|ZSCAN20;nc|ENSG00000121903|P17040-2|ZSCAN20;nc|ENSG00000121903|P17040-3|ZSCAN20;nc|ENSG00000121903|P17040-4|ZSCAN20 2.302733041254933 0.8103549651115762 1 K 1 7 11.42 0.0 0.0 1.1059 0.0 0.0 886.51313916793 0.0 886.51313916793 0.0 1.2389224185537806 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 1.1059 + + 12 + 1 2.11 60039.4 1.0 1853 3315 5167 DOHH2_400M_050219_1,5170 DOHH2_400M_050219_1,5170,LLRNYRKA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5171 27.719 223.0 388700.0 25 0 34654.0 + 3523 CTQFFKEEF 9 99 393.5124239235293 1177.515442370788 3 393.5121642947197 MULTI CID FTMS 0 0 0 5167 126275.1875 0.5003911622046725 -1 0.0521392822265625 4 Unmodified _CTQFFKEEF_ REV__ENSG00000143324|ENST00000367590|XPR1;REV__nc|ENSG00000143324|Q9UBH6-2|XPR1 10.823927491677226 0.5436922275383211 1 [{I|L}V][{M(Oxidation (M))|F}E]HEE 7 -1 21.163 0.0 0.0 1.7973 0.0 0.0 0.0 291.1066648651817 291.1066648651817 5.678732196748584 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.5 0.0 [{I|L}V][{M(Oxidation (M))|F}E]HEE 1.7973 - 255 1 2.11 72084.2 1.0 1854 3315 5167 DOHH2_400M_050219_1,5171 DOHH2_400M_050219_1,5171,CTQFFKEEF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5172 27.733 800.0 86384.0 25 0 7268.7 -1 ECKECRKCFYQ 11 77 775.8296453399473 1549.6447377466943 2 776.3320800662041 MULTI CID FTMS 0 0 0 5167 91749.4375 0.5589212449247508 -2 0.1034069061279296 5 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 10.799506525563784 0.8105043987015127 1 EAQQDA{M(Oxidation (M))|F}YQ 9 -1 58.298 0.0 0.0 3.7621 0.0 0.0 451.1791249005875 0.0 451.1791249005875 0.0 37.81386440341655 0.0 0.0 0 0.8935078169319297 0.0 0.2887254899964357 0.4247425010840047 EAQQDA{M(Oxidation (M))|F}YQ 3.7621 - 570 1 2.11 54732.8 0.5299999713897705 1855 3315 5167 DOHH2_400M_050219_1,5172 DOHH2_400M_050219_1,5172,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5173 27.738 271.0 284730.0 25 0 31458.0 + 23798 LVDQRVAEY 9 100 546.7879451073674 1091.5613372815346 2 546.7888671755791 MULTI CID FTMS 0 0 0 5167 164113.203125 0.3769359820946845 -2 0.1034069061279296 6 Unmodified _LVDQRVAEY_ ENSG00000143157|ENST00000367876|POGK 49.52724829834842 0.0414064571532091 1 {I|L}VDQ 4 5 58.488 0.0 0.0 5.3582 0.0 0.0 0.0 633.2977388971311 633.2977388971311 20.880456295278407 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + {I|L}VDQ 5.3582 + + 239 + 1 2.11 64535.9 1.0 1856 3315 5167 DOHH2_400M_050219_1,5173 DOHH2_400M_050219_1,5173,LVDQRVAEY True True LVDQRVAEY 27.73833 546.788867175579 2582168.75 5167.0 ENSG00000143157|ENST00000367876|POGK 7.091480890909831 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5174 27.742 193.0 345410.0 25 0 25126.0 + 6943 EEGSNKRLF 9 92 360.52083967997766 1078.540689640133 3 360.5206786990166 MULTI CID FTMS 0 0 0 5167 156415.296875 0.9509431033586868 3 -0.1051387786865234 7 Unmodified _EEGSNKRLF_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000553665.5_1_14:58711638-58724717:+|nuORF;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;ENST00000555931.5_1_14:58714534-58727692:+|nuORF;ENST00000556321.1_1_14:58714534-58724570:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 14.838274106304384 0.4350285940865338 1 {M(Oxidation (M))|F}E[HC]K[R{I|L}]{M(Oxidation (M))|F} 8 4 + 21.604 0.0 0.0 2.0031 2.0031 79.649 0.0 0.0 0.0 6.251837901750999 2.140012553530965 2.140012553530965 16.946051989335686 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}E[HC]K[R{I|L}]{M(Oxidation (M))|F};{M(Oxidation (M))|F}E[HA]{M(Oxidation (M))|F}S[KT]{I|L} 2.0031;0.43187 -;- 76 + 1 2.11 61019.7 1.0 1857 3315 5167 DOHH2_400M_050219_1,5174 DOHH2_400M_050219_1,5174,EEGSNKRLF False True EEGSNKRLF 27.742038 360.520678699017 964057.75 5167.0 ENST00000553665.5_1_14:58711638-58724717:+|nuORF;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000556321.1_1_14:58714534-58724570:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3;;ENST00000555931.5_1_14:58714534-58727692:+|nuORF;;ENSG00000100567|ENST00000216455|PSMA3;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF 3.607062816619873 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5176 27.747 34.0 880130.0 25 0 58461.0 + -1 SRPDSILGMQF 11 64 633.810681756521 1265.606810579842 2 633.8111450076103 MULTI CID FTMS 0 0 0 5175 1361241.625 0.2989832584818146 4 -0.2374744415283203 1 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 20.41453444215458 0.6105011870913812 1 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 57.655 0.0 0.0 4.5556 4.5556 73.814 0.0 0.0 0.0 1.4916623986031396 10.012262311882765 1.4916623986031396 1.4916623986031396 0 1.079689690656103 0.0 0.0 1.0994850021680094 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 4.5556;4.4377;3.8314;3.8314;3.7136;3.7136;3.1102;2.9923 -;-;-;-;-;-;-;- 197 1 2.11 31319.4 1.0 1858 3316 5175 DOHH2_400M_050219_1,5176 DOHH2_400M_050219_1,5176,SRPDSILGMQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5177 27.748 52.0 1322700.0 25 0 320120.0 + 18773 LANRVLAA 8 72 414.2587371651272 826.5029213970545 2 414.2582275271416 MULTI CID FTMS 0 0 0 5175 725617.0 0.0091822525086601 8 -0.5088901519775391 2 Unmodified _LANRVLAA_ ENST00000433119.5_1_3:13522787-13522853:+|nuORF 26.34127834903884 0.4900704351052977 1 {I|L}AA 3 5 45.93 0.0 0.0 5.5571 0.0 0.0 0.0 568.3208712213499 568.3208712213499 33.16565281547536 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + {I|L}AA 5.5571 + + 20 + 1 2.11 61098.8 1.0 1859 3316 5175 DOHH2_400M_050219_1,5177 DOHH2_400M_050219_1,5177,LANRVLAA False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5178 27.752 179.0 350490.0 25 0 25856.0 + 7137 EENFPENKEY 10 84 649.7802727901433 1297.5459926470865 2 649.7805053591728 MULTI CID FTMS 0 0 0 5175 317792.25 0.9481521649035848 -3 0.1416206359863281 3 Unmodified _EENFPENKEY_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 53.40400417844725 0.0601721406801337 1 EEN{M(Oxidation (M))|F} 4 6 39.226 0.0 0.0 3.0231 0.0 0.0 0.0 775.3265461961677 775.3265461961677 15.28794724829786 0.0 0.0 0.0 0 1.0 1.5228787452803376 1.305462187404089 0.0 + EEN{M(Oxidation (M))|F} 3.0231 + + 435 1 2.11 54689.2 1.0 1860 3316 5175 DOHH2_400M_050219_1,5178 DOHH2_400M_050219_1,5178,EENFPENKEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5179 27.754 93.0 676410.0 25 0 28441.0 + 700 AENPGKYNI 9 95 503.2539178906201 1004.4932828480402 2 503.2529479861259 MULTI CID FTMS 0 0 0 5175 293912.65625 0.3787875004540921 3 -0.1522293090820312 4 Unmodified _AENPGKYNI_ ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU 13.90604991867851 0.4602628045680013 1 {[CP]|[EA]}N{I|L} 4 5 17.664 0.0 0.0 1.7585 0.0 0.0 0.0 574.2685640924436 574.2685640924436 4.274400170273578 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 {[CP]|[EA]}N{I|L} 1.7585 - 96 + 1 2.11 53558.8 1.0 1861 3316 5175 DOHH2_400M_050219_1,5179 DOHH2_400M_050219_1,5179,AENPGKYNI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5180 27.763 540.0 295950.0 25 0 26588.0 + 2127 APVPAPERK 9 146 482.7824454486659 963.5503379641318 2 482.7826415896416 MULTI CID FTMS 0 0 0 5175 192695.34375 0.2699409087243749 -4 0.1513652801513672 5 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 32.30548876998284 0.1201446275138228 1 [PA]APV{I|L} 6 -1 57.048 0.0 0.0 5.9206 0.0 0.0 0.0 412.1946810358032 412.1946810358032 28.0854562117252 0.0 0.0 0.0 0 1.586696871556164 1.6989700043360187 0.0 0.0 [PA]APV{I|L} 5.9206 - 347 + 1 2.11 121976.7 1.0 1862 3316 5175 DOHH2_400M_050219_1,5180 DOHH2_400M_050219_1,5180,APVPAPERK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5181 27.77 373.0 416710.0 25 0 80014.0 + 7170 EEPPSKPSF 9 120 509.2485762612772 1016.4825995893544 2 509.2484924197197 MULTI CID FTMS 0 0 0 5175 152301.078125 0.6231191870663794 6 -0.3898906707763672 6 Unmodified _EEPPSKPSF_ ENSG00000186185|ENST00000593135|KIF18B;nc|ENSG00000186185|Q86Y91-6|KIF18B 29.081581746732265 0.1611639662936252 1 EEPP[KS]{M(Oxidation (M))|F}[PS] 9 2 + 45.383 0.0 0.0 4.4647 4.4647 72.443 0.0 0.0 0.0 25.37787469514015 0.7390874094431865 0.7390874094431865 0.7390874094431865 0 0.3807196863200844 2.0 1.0994850021680094 0.0 EEPP[KS]{M(Oxidation (M))|F}[PS];EEPP[KS][PS]{M(Oxidation (M))|F};EEPP[KS][PA]Y;EEP{I|L}[QA]{M(Oxidation (M))|F}[PS];EEP{I|L}[QA][PS]{M(Oxidation (M))|F};EEP{I|L}GAA{M(Oxidation (M))|F}[PS];EEP{I|L}GAA[PS]{M(Oxidation (M))|F};EEP{I|L}{[QS]|[NT]}[PA]{M(Oxidation (M))|F};EEP{I|L}G{[SA]|[TG]}[PA]{M(Oxidation (M))|F};EEP{I|L}{[QS]|[NT]}{[DS]|[MA]|[CV]|TT}{I|L} 4.4647;4.392;4.0224;3.4809;3.4082;3.2351;3.1624;2.9388;2.693;2.4694 -;+;-;-;-;-;-;-;-;- + 187 + 1 2.11 125118.8 1.0 1863 3316 5175 DOHH2_400M_050219_1,5181 DOHH2_400M_050219_1,5181,EEPPSKPSF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5182 27.784 800.0 217290.0 25 0 25579.0 + 39500 VASFKHAL 8 146 436.7529683261975 871.4913837191949 2 436.7529174685478 MULTI CID FTMS 0 0 0 5175 129953.0859375 0.6528589610708492 -2 0.0903530120849609 7 Unmodified _VASFKHAL_ ENSG00000172062|ENST00000380707|SMN1;ENSG00000205571|ENST00000380743|SMN2;nc|ENSG00000205571|Q16637-2|SMN1;nc|ENSG00000205571|Q16637-3|SMN1;nc|ENSG00000205571|Q16637-4|SMN1 60.38955033654506 0.1153153300159026 1 VAS{M(Oxidation (M))|F}KHA{I|L} 8 0 + 67.783 0.0 0.0 7.7778 7.7778 93.988 0.0 0.0 0.0 36.77462279484367 10.204262829037836 10.204262829037836 11.180993120779938 0 0.7720774603115347 2.0 0.4247425010840047 0.0 + + VAS{M(Oxidation (M))|F}KHA{I|L};VAS{M(Oxidation (M))|F}K{I|L}[HA];VAS[RN]NV{I|L};VA[HK]G[{I|L}T]{M(Oxidation (M))|F};VAS{M(Oxidation (M))|F}[RV]{[HG]|PP};VAS[RN]AAA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HK]AA{I|L}V;{[VA]|[{I|L}G]}S{[QN]|[E{I|L}]|[KN]}[RV]V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QN]|[E{I|L}]|[KN]}AA{I|L}V;{[VA]|[{I|L}G]}S[{I|L}P]{[WT]|[RM]}V 7.7778;6.4948;5.3079;5.0714;4.8564;4.7977;4.3748;4.1693;3.9395;3.5385 +;-;-;-;-;-;-;-;-;- + 423 + 1 2.11 134166.5 0.5099999904632568 1864 3316 5175 DOHH2_400M_050219_1,5182 DOHH2_400M_050219_1,5182,VASFKHAL True True VASFKHAL 27.783684 436.752917468548 1044192.0 5175.0 ENSG00000205571|ENST00000380743|SMN2;;nc|ENSG00000205571|Q16637-2|SMN1;;nc|ENSG00000205571|Q16637-4|SMN1;;nc|ENSG00000205571|Q16637-3|SMN1;;ENSG00000172062|ENST00000380707|SMN1 6.124643484751384 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5184 27.801 800.0 132690.0 25 0 7968.1 + 38454 TSDDVKEQIY 10 157 599.285161667328 1196.555770401456 2 599.2853271365166 MULTI CID FTMS 0 0 0 5183 98950.28125 0.0196667105746181 7 -0.4672412872314453 1 Unmodified _TSDDVKEQIY_ ENSG00000110700|ENST00000525634|RPS13;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000534329.1_1_11:17098694-17099257:-|nuORF 80.6760300276096 0.0165137828474802 1 {[MG]|[TS]}DDV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}Y 10 0 + 69.421 0.0 0.0 5.8017 5.8017 85.254 0.0 0.0 0.0 10.07007180900061 15.026975159433531 10.07007180900061 8.02378753635658 0 2.1989700043360187 0.0 1.950679860468595 0.0 + + {[MG]|[TS]}DDV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}Y;{[MG]|[TS]}DDV{[{M(Oxidation (M))|F}H]|[RQ]}T{I|L}Y;{[MG]|[TS]}DDV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]{I|L}Y;{[ES]|[DT]|[{I|L}C]}SDV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}Y;{[DS]|[MA]|[CV]|TT}TDV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}Y;{[ES]|[DT]|[{I|L}C]}SDV{[{M(Oxidation (M))|F}H]|[RQ]}T{I|L}Y;{[DS]|[MA]|[CV]|TT}DTV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}Y;{[ES]|[DT]|[{I|L}C]}SDV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]{I|L}Y;{[DS]|[MA]|[CV]|TT}TDV{[{M(Oxidation (M))|F}H]|[RQ]}T{I|L}Y;{[DS]|[MA]|[CV]|TT}TDV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]{I|L}Y 5.8017;5.1311;5.0358;4.9601;4.5466;4.2895;4.2747;4.1942;3.876;3.7806 +;-;-;-;-;-;-;-;-;- + 1211 1 2.12 80832.6 0.699999988079071 1865 3317 5183 DOHH2_400M_050219_1,5184 DOHH2_400M_050219_1,5184,TSDDVKEQIY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5185 27.803 57.0 1040100.0 25 0 225680.0 + 6397 DWEDDLTQY 9 92 592.7387710107586 1183.462989088317 2 592.7393066287041 MULTI CID FTMS 0 0 0 5183 766797.5 1.0 0 0.0 2 Unmodified _DWEDDLTQY_ REV__ENSG00000139055|ENST00000266397|ERP27 12.531546534597751 0.4974689918368763 1 {I|L}S{I|L}SQY 6 -1 29.87 0.0 0.0 2.524 0.0 0.0 474.0985890119157 0.0 474.0985890119157 0.0 15.265931504406469 0.0 0.0 0 0.5484550065040282 0.0 0.5 0.0 {I|L}S{I|L}SQY 2.524 - 167 1 2.12 49195.3 1.0 1866 3317 5183 DOHH2_400M_050219_1,5185 DOHH2_400M_050219_1,5185,DWEDDLTQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5186 27.806 156.0 552970.0 25 0 78677.0 39078 TVVYKSSIDL 10 101 375.5436275768271 1123.6090533306813 3 375.5432617068291 MULTI CID FTMS 0 0 0 5183 196898.234375 0.0764063376598632 -3 0.1320018768310547 3 Unmodified _TVVYKSSIDL_ ENSG00000111481|ENST00000262061|COPZ1;ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-3|COPZ1;nc|ENSG00000111481|P61923-4|COPZ1;nc|ENSG00000111481|P61923-5|COPZ1 26.268140514670165 0.3785003716575977 1 GS{I|L} 3 8 33.984 0.0 0.0 3.0246 0.0 0.0 848.4637339346808 0.0 848.4637339346808 0.0 19.547509540478032 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 GS{I|L} 3.0246 - 63 1 2.12 75437.7 1.0 1867 3317 5183 DOHH2_400M_050219_1,5186 DOHH2_400M_050219_1,5186,TVVYKSSIDL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5187 27.809 154.0 484940.0 25 0 21941.0 + 41285 VPHTRPVSL 9 116 503.2956876608167 1004.5768223884334 2 503.2971069216728 MULTI CID FTMS 0 0 0 5183 168056.59375 0.0278097099075382 8 -0.5247611999511719 4 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 38.17557092003332 0.0854718145212029 1 VPHT 4 5 57.225 0.0 0.0 5.6964 0.0 0.0 0.0 567.3247164361936 567.3247164361936 47.04413271286606 0.0 0.0 0.0 0 0.5941876774005248 0.8860566476931632 1.1989700043360187 0.0 + VPHT 5.6964 + + 73 + 1 2.12 62421.3 1.0 1868 3317 5183 DOHH2_400M_050219_1,5187 DOHH2_400M_050219_1,5187,VPHTRPVSL True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5189 27.821 569.0 202320.0 25 0 20138.0 36734 TDSDEDIRETY 11 114 448.5247187648846 1342.552326894854 3 448.5247680544853 MULTI CID FTMS 0 0 0 5188 193581.578125 0.4709003664207695 8 -0.5152664184570312 1 Unmodified _TDSDEDIRETY_ ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A 5.731851221503515 0.8481046878870278 1 {M(Oxidation (M))|F}TY 3 9 25.56 0.0 0.0 1.9038 0.0 0.0 913.3729588552496 0.0 913.3729588552496 0.0 13.085456211725202 0.0 0.0 0 0.0 0.0 0.5866968715561641 0.0 {M(Oxidation (M))|F}TY 1.9038 - 84 + 1 2.12 95485.8 1.0 1869 3318 5188 DOHH2_400M_050219_1,5189 DOHH2_400M_050219_1,5189,TDSDEDIRETY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5190 27.83 485.0 244200.0 25 0 16732.0 + 7829 ELKNKVETF 9 162 554.306589890423 1106.5986268476458 2 554.3061401247978 MULTI CID FTMS 0 0 0 5188 137695.515625 1.0 0 0.0 2 Unmodified _ELKNKVETF_ ENSG00000123219|ENST00000396679|CENPK 40.23920728925047 0.0741434193262949 1 {[QN]|[E{I|L}]|[KN]}KN[{I|L}T]AAT{M(Oxidation (M))|F} 10 4 + 42.532 0.0 0.0 3.8435 3.8435 83.594 0.0 0.0 0.0 5.820676315500428 3.2511428984467017 3.2511428984467017 17.36296824666673 0 0.8352587893338912 1.5228787452803376 0.484825539911597 0.0 {[QN]|[E{I|L}]|[KN]}KN[{I|L}T]AAT{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}KN[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}Y;[QP]{I|L}[KQ]VT{M(Oxidation (M))|F}{M(Oxidation (M))|F};[QP]GRRVT{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[NV]|[RG]}K[RP]VT{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}K{[DS]|[MA]|[CV]|TT}[YK]QP;[{I|L}A][PG][KQ]VT{M(Oxidation (M))|F}{M(Oxidation (M))|F};[{I|L}A][W{I|L}][{I|L}P]T{M(Oxidation (M))|F}{M(Oxidation (M))|F};[VP]AA[KQ]VT{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[RH][C(Carbamidomethyl (C))H]KK 3.8435;2.2745;1.0539;1.0539;0.76705;0.74256;0.69228;0.55848;0.52523;0.33253 -;-;-;-;-;-;-;-;-;- 699 + 1 2.12 93175.0 1.0 1870 3318 5188 DOHH2_400M_050219_1,5190 DOHH2_400M_050219_1,5190,ELKNKVETF True True ELKNKVETF 27.830059 554.306140124798 829454.1875 5188.0 ENSG00000123219|ENST00000396679|CENPK 6.6940310796101885 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5191 27.836 299.0 239320.0 25 0 21211.0 + 36897 TEQPPPRSW 9 104 549.2725246039536 1096.530496274707 2 549.2719604372978 MULTI CID FTMS 0 0 0 5188 99843.46875 0.2480533771999562 9 -0.5624141693115234 3 Unmodified _TEQPPPRSW_ ENSG00000113300|ENST00000261951|CNOT6 28.49450938151212 0.1686335738423394 1 {[ET]|[MV]}QPP[WK][DP] 9 4 + 29.656 0.0 0.0 2.7045 2.7045 66.925 0.0 0.0 0.0 0.0 0.0 0.0 0.2680249241196719 0 0.3807196863200844 0.0 0.5 0.4247425010840047 {[ET]|[MV]}QPP[WK][DP];{[DS]|[MA]|[CV]|TT}[WR]PPQ[DP];{[ET]|[MV]}[WK]PP[AG][DP];{[ET]|[MV]}[AG]PP[WR][PS];{[ET]|[MV]}QPP[C(Carbamidomethyl (C))R][{I|L}P];{[ET]|[MV]}[WK]P[HA][QT];{[ET]|[MV]}[AG]PP[C(Carbamidomethyl (C))R][{I|L}P];{[ET]|[MV]}Q[HA][KP]{[WT]|[RM]};{[DS]|[MA]|[CV]|TT}[WR]P[HA][QT] 2.7045;2.6801;1.8648;1.8403;1.6111;0.82476;0.77136;0.74569;0.45311 -;-;-;-;-;-;-;-;- 189 + 1 2.12 62839.3 1.0 1871 3318 5188 DOHH2_400M_050219_1,5191 DOHH2_400M_050219_1,5191,TEQPPPRSW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5192 27.849 800.0 269300.0 25 0 20178.0 + 29135 QETSFTKEAY 10 191 602.2798718857282 1202.5451908382563 2 602.2800781130791 MULTI CID FTMS 0 0 0 5188 96451.4453125 0.0473912166462286 -2 0.066925048828125 4 Unmodified _QETSFTKEAY_ ENSG00000133112|ENST00000530705|TPT1;ENST00000533567.5_1_13:45912892-45914385:-|nuORF;nc|ENSG00000133112|P13693-2|TPT1 47.594388314883695 0.0942698883389255 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TS{M(Oxidation (M))|F}T[{I|L}T]NY 10 3 + 41.577 0.0 0.0 3.4574 3.4574 77.125 0.0 0.0 0.0 -0.0715452734763886 5.114851265438816 -0.0715452734763886 7.7815125038364386 0 0.4247425010840047 0.0 0.6694451763165201 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TS{M(Oxidation (M))|F}T[{I|L}T]NY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TPHT[{I|L}T]NY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TS{M(Oxidation (M))|F}T[{I|L}T]GGY;[TP]C(Carbamidomethyl (C))PHT[{I|L}T]NY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TMHA[RP]AY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TS{M(Oxidation (M))|F}TG{[WT]|[RM]}{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TPHT[{I|L}T]GGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TMH{M(Oxidation (M))|F}TVNP;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AAK[HK]DNY;[QA]AEG[WM]TVNP 3.4574;2.8103;2.6953;2.3634;2.097;2.0616;2.0482;1.9369;1.9113;1.813 -;-;-;-;-;-;-;-;-;- 7580 + 1 2.12 155488.4 0.5699999928474426 1872 3318 5188 DOHH2_400M_050219_1,5192 DOHH2_400M_050219_1,5192,QETSFTKEAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5193 27.863 800.0 97000.0 25 0 9784.7 + -1 FDQGCEECTY 10 112 626.2179362180962 1250.4213195029922 2 626.2185546755791 MULTI CID FTMS 0 0 0 5188 91085.5390625 0.1272722880415356 6 -0.441965103149414 5 Carbamidomethyl (C) _FDQGC(Carbamidomethyl (C))EECTY_ REV__ENSG00000185177|ENST00000319636|ZNF479 3.944395688203298 0.708391353636983 1 [YT]APPP 6 -1 25.353 0.0 0.0 2.0276 0.0 0.0 0.0 621.0820000051984 621.0820000051984 7.394549897933871 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.25 0.0 [YT]APPP 2.0276 - 150 1 2.12 63762.0 0.5799999833106995 1873 3318 5188 DOHH2_400M_050219_1,5193 DOHH2_400M_050219_1,5193,FDQGCEECTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5194 27.877 800.0 166050.0 25 0 18500.0 + 8933 FAMNDESVFY 10 120 611.7594162177263 1221.5042795022523 2 611.7587768435478 MULTI CID FTMS 0 0 0 5188 77876.453125 0.4570056401182581 -1 0.0252761840820312 6 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 25.399314129420983 0.3980215340001851 1 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 109.59 0.0 0.0 8.9716 8.9716 93.037 0.0 0.0 0.0 17.727562184969372 87.80033272627976 17.727562184969372 9.164539485499262 0 0.9247425010840048 1.0457574905606752 1.298455006504028 1.274227503252014 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]Q{[CP]|[EA]}QNA{M(Oxidation (M))|F}Y;[HD]Q{[CP]|[EA]}QGGA{M(Oxidation (M))|F}Y;[HD]Q{[CP]|[EA]}[AG]NA{M(Oxidation (M))|F}Y 8.9716;8.2213;8.2213;8.2213;7.474;7.474;7.1263;6.8445;6.0942;6.0942 -;-;-;-;-;-;-;-;-;- 1667 1 2.12 99575.9 0.5400000214576721 1874 3318 5188 DOHH2_400M_050219_1,5194 DOHH2_400M_050219_1,5194,FAMNDESVFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5195 27.88 176.0 213170.0 25 0 13159.0 + 32436 SADPDNLKY 9 82 511.74461123083984 1021.4746695284796 2 511.7432739138603 MULTI CID FTMS 0 0 0 5188 205104.28125 0.2080522120523596 4 -0.3229656219482422 7 Unmodified _SADPDNLKY_ ENSG00000157106|ENST00000446231|SMG1 14.838274106304384 0.4350285940865338 1 {[SA]|[TG]}D 3 6 32.447 0.0 0.0 3.1765 0.0 0.0 0.0 745.3554428041234 745.3554428041234 15.993624753846092 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[SA]|[TG]}D 3.1765 + + 24 1 2.12 34159.0 1.0 1875 3318 5188 DOHH2_400M_050219_1,5195 DOHH2_400M_050219_1,5195,SADPDNLKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5196 27.884 103.0 517580.0 25 0 54148.0 + 33107 SESNFARAY 9 73 522.7405478627088 1043.4665427922175 2 522.7410156130791 MULTI CID FTMS 0 0 0 5188 168237.46875 0.3042063617542984 -2 0.066925048828125 8 Unmodified _SESNFARAY_ ENSG00000062485|ENST00000351328|CS;ENST00000546621.5_1_12:56668606-56679804:-|nuORF;ENST00000547449.1_1_12:56676173-56676733:-|nuORF;ENST00000547912.1_1_12:56676173-56676410:-|nuORF 81.61307344734483 0.0171259190214613 1 {[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}ARAY 9 0 + 66.973 0.0 0.0 6.4183 6.4183 89.363 0.0 0.0 0.0 52.36880000633434 12.498774732165998 12.498774732165998 9.208187539523747 0 0.9247425010840048 0.0 0.3807196863200844 0.805462187404089 + + {[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}ARAY;{[ES]|[DT]|[{I|L}C]}SGG{M(Oxidation (M))|F}ARAY;{[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}{[NV]|[RG]}[{M(Oxidation (M))|F}T];{[ES]|[DT]|[{I|L}C]}SGG{M(Oxidation (M))|F}{[NV]|[RG]}[{M(Oxidation (M))|F}T];{[ES]|[DT]|[{I|L}C]}S{[MS]|[{M(Oxidation (M))|F}A]}[KQ][{M(Oxidation (M))|F}T] 6.4183;5.5358;3.8586;2.9762;1.7732 +;-;-;-;- + 160 + 1 2.12 45533.0 1.0 1876 3318 5188 DOHH2_400M_050219_1,5196 DOHH2_400M_050219_1,5196,SESNFARAY True True SESNFARAY 27.884175 522.741015613079 3119443.5 5188.0 ENSG00000062485|ENST00000351328|CS;;ENST00000547912.1_1_12:56676173-56676410:-|nuORF;;ENST00000547449.1_1_12:56676173-56676733:-|nuORF;;ENST00000546621.5_1_12:56668606-56679804:-|nuORF 6.0157554149627686 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5197 27.894 576.0 182730.0 25 0 27146.0 + 36619 TAQATSCNW 9 117 491.209372506131 0 491.2097045779228 PEAK CID FTMS 0 0 0 5188 128541.3046875 1.0 0 0.0 9 Unmodified _TAQATSCNW_ REV__ENST00000599425.5_1_19:50060962-50063306:-|nuORF;REV__ENST00000600019.5_1_19:50060962-50063200:-|nuORF 10.823927491677226 0.3028200641087142 1 C(Carbamidomethyl (C)) 1 -1 3.0989 0.0 0.0 0.31609 0.0 0.0 348.11196903394324 469.24363123111567 817.3556002650589 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.31609 + + 22 + 1 2.12 84752.2 1.0 1877 3318 5188 DOHH2_400M_050219_1,5197 DOHH2_400M_050219_1,5197,TAQATSCNW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5199 27.901 129.0 282040.0 25 0 38480.0 + 33069 SEQSLGQKL 9 69 495.2667330355992 988.5189131379984 2 495.2667114138603 MULTI CID FTMS 0 0 0 5198 198934.84375 0.11066939151814 4 -0.2937240600585937 1 Unmodified _SEQSLGQKL_ ENSG00000104738|ENST00000649973|MCM4 22.736283301280096 0.2418982879461534 1 {[ES]|[DT]|[{I|L}C]}QS{I|L}{[QG]|[NA]}K{I|L} 9 0 + 23.677 0.0 0.0 2.3952 2.3952 70.87 0.0 0.0 0.0 11.893811656423544 4.736385658588528 4.736385658588528 3.467874862246564 0 0.4247425010840047 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}QS{I|L}{[QG]|[NA]}K{I|L};{[ES]|[DT]|[{I|L}C]}VP[WM]K{I|L};{[ES]|[DT]|[{I|L}C]}[AG]S{I|L}{[QG]|[NA]}K{I|L};{[MG]|[TS]}KK{I|L}SYY;{[ES]|[DT]|[{I|L}C]}VP[QA][{M(Oxidation (M))|F}V]{I|L};{[MG]|[TS]}KK{I|L}[DP][NS] 2.3952;2.0443;1.4636;1.3533;0.92923;0.11175 +;-;-;-;-;- + 62 + 1 2.129 33684.1 1.0 1878 3319 5198 DOHH2_400M_050219_1,5199 DOHH2_400M_050219_1,5199,SEQSLGQKL False True SEQSLGQKL 27.900773 495.26671141386 16757399.0 5198.0 ENSG00000104738|ENST00000649973|MCM4 6.061780611673991 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5200 27.908 377.0 210820.0 25 0 9954.1 + 32785 DTDDEIAKY 9 135 535.2670612040412 1068.5195694748822 2 535.2671996951103 MULTI CID FTMS 0 0 0 5198 124891.875 0.0057344301699319 11 -0.58966064453125 2 Unmodified _SEEHRDLAL_ ENST00000503126.1_1_5:179133324-179137021:+|nuORF;ENSG00000127022|ENST00000247461|CANX;nc|ENSG00000127022|P27824-2|CANX 26.88365393820708 0.1891292719743517 1 QDT[WK]A{I|L} 7 7 42.668 0.0 0.0 3.9932 0.0 0.0 208.082204828201 0.0 208.082204828201 0.0 22.71552144059964 0.0 0.0 0 2.0356668758921828 0.0 0.3494850021680094 0.2742275032520141 QDT[WK]A{I|L} 3.9932 - 735 + 1 2.129 64861.7 1.0 1879 3319 5198 DOHH2_400M_050219_1,5200 DOHH2_400M_050219_1,5200,SEEHRDLAL False False DTDDEIAKY 27.907562 535.26719969511 595855.375 5198.0 ENST00000503126.1_1_5:179133324-179137021:+|nuORF;;ENSG00000127022|ENST00000247461|CANX;;nc|ENSG00000127022|P27824-2|CANX 4.043107748031616 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5201 27.909 69.0 1105300.0 25 0 136340.0 + 32958 SELPTAKEY 9 86 519.2610459252904 1036.5075389173808 2 519.2614013552666 MULTI CID FTMS 0 0 0 5198 713429.875 0.7726140421649398 -1 0.0853042602539062 3 Unmodified _SELPTAKEY_ ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;ENST00000569448.1_1_16:8993400-8995074:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7 23.78978130925829 0.2284941198415988 1 {[ES]|[DT]|[{I|L}C]}{I|L}PTA 6 3 27.096 0.0 0.0 2.6141 0.0 0.0 0.0 435.1877535455688 435.1877535455688 6.627946838353573 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}{I|L}PTA 2.6141 + + 171 + 1 2.129 62021.4 1.0 1880 3319 5198 DOHH2_400M_050219_1,5201 DOHH2_400M_050219_1,5201,SELPTAKEY False True SELPTAKEY 27.90921 519.261401355267 6772399.0 5198.0 ENSG00000187555|ENST00000344836|USP7;;nc|ENSG00000187555|Q93009-3|USP7;;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;;ENST00000569448.1_1_16:8993400-8995074:-|nuORF 5.072189490000407 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5202 27.911 80.0 1095100.0 25 0 329430.0 + 31453 RPRGPEGVGSL 11 71 562.8115434164378 1123.6085338996754 2 562.8115112185478 MULTI CID FTMS 0 0 0 5198 658821.25 0.4940364902569105 -1 0.0853042602539062 4 Unmodified _RPRGPEGVGSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 11.06528012570034 0.8049760139636193 1 {I|L} 1 10 16.571 0.0 0.0 1.4748 0.0 0.0 992.5135764795568 0.0 992.5135764795568 0.0 6.108747354798217 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {I|L} 1.4748 + + 37 + 1 2.129 71227.1 1.0 1881 3319 5198 DOHH2_400M_050219_1,5202 DOHH2_400M_050219_1,5202,RPRGPEGVGSL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5203 27.912 49.0 2076400.0 25 0 473920.0 36919 TESYSVPQRGG 11 90 394.1922086448131 1179.5547965346393 3 394.1921569705009 MULTI CID FTMS 0 0 0 5198 785572.5 1.0 0 0.0 5 Unmodified _TESYSVPQRGG_ ENST00000372876.1_1_6:42712424-42712766:-|nuORF 13.534932898082838 0.7536045057035061 1 TE{M(Oxidation (M))|F}CSYKR{M(Oxidation (M))|F} 9 7 + 80.474 0.0 0.0 6.8224 6.8224 62.654 0.0 0.0 0.0 62.51505739998382 10.084406814122218 10.084406814122218 0.0 0 0.4896518287104437 1.3010299956639813 0.5 0.0 TE{M(Oxidation (M))|F}CSYKR{M(Oxidation (M))|F};TESYSYKR{M(Oxidation (M))|F};TE{M(Oxidation (M))|F}[HM]{[NV]|[RG]}R{M(Oxidation (M))|F};TE{M(Oxidation (M))|F}[HM][RK]MT;HE[WD]YKR{M(Oxidation (M))|F} 6.8224;6.8224;3.749;3.1423;2.5923 -;-;-;-;- 176 + 1 2.129 88657.5 1.0 1882 3319 5198 DOHH2_400M_050219_1,5203 DOHH2_400M_050219_1,5203,TESYSVPQRGG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5204 27.916 206.0 305210.0 25 0 19178.0 -1 TENTCTRLC 9 98 549.2410399465839 1096.4675269599677 2 549.2406494021416 MULTI CID FTMS 0 0 0 5198 195442.359375 1.0 0 0.0 6 Carbamidomethyl (C) _TENTCTRLC(Carbamidomethyl (C))_ ENSG00000146839|ENST00000613979|ZAN;nc|ENSG00000146839|Q9Y493-2|ZAN;nc|ENSG00000146839|Q9Y493-3|ZAN;nc|ENSG00000146839|Q9Y493-4|ZAN;nc|ENSG00000146839|Q9Y493-5|ZAN;nc|ENSG00000146839|Q9Y493-6|ZAN;nc|ENSG00000146839|Q9Y493-7|ZAN 34.10243960390752 0.1078313939113124 1 [AG]ETS{I|L} 6 -1 19.236 0.0 0.0 1.7543 0.0 0.0 0.0 535.1795990637364 535.1795990637364 3.204934384211672 0.0 0.0 0.0 0 0.0 2.0 0.8054621874040891 0.0 [AG]ETS{I|L} 1.7543 - 205 1 2.129 55031.6 1.0 1883 3319 5198 DOHH2_400M_050219_1,5204 DOHH2_400M_050219_1,5204,TENTCTRLC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5205 27.922 304.0 338400.0 25 0 40430.0 + 4321 DARQKIGL 8 102 450.7665984928643 899.5186440525287 2 450.7666198611259 MULTI CID FTMS 0 0 0 5198 172753.265625 0.3849477214248395 -1 0.0853042602539062 7 Unmodified _DARQKIGL_ ENSG00000100227|ENST00000252115|POLDIP3;nc|ENSG00000100227|Q9BY77-2|POLDIP3 39.94969957227396 0.2351327405675156 1 {[DA]|[EG]}RQK{I|L}G{I|L} 8 0 + 51.129 0.0 0.0 5.684 5.684 82.721 0.0 0.0 0.0 5.611757507782144 14.024174299984992 5.611757507782144 5.611757507782144 0 1.16944517631652 0.958607314841775 0.3807196863200844 0.0 + + {[DA]|[EG]}RQK{I|L}G{I|L};{[VA]|[{I|L}G]}{[WN]|[YH]}K{I|L}G{I|L};{[DA]|[EG]}R[AG]K{I|L}G{I|L} 5.684;5.0601;4.6543 +;-;- + 106 1 2.129 85358.9 1.0 1884 3319 5198 DOHH2_400M_050219_1,5205 DOHH2_400M_050219_1,5205,DARQKIGL False True DARQKIGL 27.921802 450.766619861126 2374403.75 5198.0 ENSG00000100227|ENST00000252115|POLDIP3;;nc|ENSG00000100227|Q9BY77-2|POLDIP3 4.006354808807373 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5206 27.931 530.0 195650.0 25 0 10741.0 + 26126 NPSLKQQL 8 150 464.2664145288009 926.5182761244016 2 464.2657043337822 MULTI CID FTMS 0 0 0 5198 102311.328125 1.0 0 0.0 8 Unmodified _NPSLKQQL_ ENSG00000135390|ENST00000394349|ATP5MC2;ENSG00000154518|ENST00000284727|ATP5MC3;ENSG00000159199|ENST00000393366|ATP5MC1;ENST00000429083.1_1_2:198128082-198128199:+|nuORF;ENST00000442175.1_1_X:41958063-41958324:-|nuORF;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;ENST00000513781.5_1_17:46970480-46973128:+|nuORF;nc|ENSG00000135390|Q06055-2|ATP5MC2;nc|ENSG00000135390|Q06055-3|ATP5MC2 46.020951573049366 0.1579632664462935 1 NPS{I|L} 4 4 49.865 0.0 0.0 5.382 0.0 0.0 0.0 512.2832735650999 512.2832735650999 31.90614065464281 0.0 0.0 0.0 0 0.6421590589602533 1.3010299956639813 0.0 0.0 + NPS{I|L} 5.382 + + 218 + 1 2.129 82152.4 1.0 1885 3319 5198 DOHH2_400M_050219_1,5206 DOHH2_400M_050219_1,5206,NPSLKQQL False True NPSLKQQL 27.931121 464.265704333782 720107.8125 5198.0 nc|ENSG00000135390|Q06055-3|ATP5MC2;;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;;ENST00000442175.1_1_X:41958063-41958324:-|nuORF;;ENSG00000154518|ENST00000284727|ATP5MC3;;nc|ENSG00000135390|Q06055-2|ATP5MC2;;ENST00000429083.1_1_2:198128082-198128199:+|nuORF;;ENSG00000135390|ENST00000394349|ATP5MC2;;ENSG00000159199|ENST00000393366|ATP5MC1;;ENST00000513781.5_1_17:46970480-46973128:+|nuORF 4.715340773264567 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5207 27.945 800.0 181080.0 25 0 15938.0 8614 EVEEDEYKAFY 11 136 711.3077092276643 1420.6008655221283 2 711.3081542849541 MULTI CID FTMS 0 0 0 5198 94000.2109375 0.1490567695902672 -2 0.1105804443359375 9 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 17.11289562659939 0.6791789249425932 1 [HD][QA]EAGAQGGA{M(Oxidation (M))|F}Y 14 10 + 91.86 0.0 0.0 6.4662 6.4662 78.653 0.0 0.0 0.0 0.2140746052526054 11.504697682456351 0.2140746052526054 0.2140746052526054 0 0.8935078169319297 1.0457574905606752 1.1496498648046138 1.860924374808178 [HD][QA]EAGAQGGA{M(Oxidation (M))|F}Y;[QA]HDEAGAQGGA{M(Oxidation (M))|F}Y;[HD]EAQAGAQGGA{M(Oxidation (M))|F}Y;[HD][QA]EAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[HD]EAQAQQGGA{M(Oxidation (M))|F}Y;[HD]EQAAGAQGGA{M(Oxidation (M))|F}Y;[HD]EQAAQQGGA{M(Oxidation (M))|F}Y;[HD][QA]EAGANAGA{M(Oxidation (M))|F}Y;[QA]HDEAGANAGA{M(Oxidation (M))|F}Y 6.4662;6.4512;6.4465;6.4207;6.4056;6.401;6.3226;6.277;6.2324;6.2173 -;-;-;-;-;-;-;-;-;- 20716 1 2.129 103172.1 0.5699999928474426 1886 3319 5198 DOHH2_400M_050219_1,5207 DOHH2_400M_050219_1,5207,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5208 27.953 477.0 126070.0 25 0 14730.0 + + -1 AVDFAERHGY 10 106 582.2760547740179 1162.5375566148357 2 582.7788574099541 MULTI CID FTMS 0 0 0 5198 94533.3359375 0.9089099300650556 1 -0.085245132446289 10 2 Oxidation (M) _GLM(Oxidation (M))M(Oxidation (M))YIYLQ_ ENST00000531767.1_1_8:146017155-146017514:-|nuORF;ENST00000528296.5_1_8:146015816-146017457:-|nuORF;ENSG00000161016|ENST00000528957|RPL8;ENST00000525232.5_1_8:146017155-146017514:-|nuORF 13.50788311687929 0.4710407108020397 1 Q 1 -1 17.857 0.0 0.0 1.536 0.0 0.0 1016.468233960342 0.0 1016.468233960342 0.0 0.6212868006542713 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 Q 1.536 + + 79 + 1 2.129 50495.7 1.0 1887 3319 5198 DOHH2_400M_050219_1,5208 DOHH2_400M_050219_1,5208,GLMMYIYLQ False False AVDFAERHGY 27.953391 582.2778 435016.125 5198.0 ENST00000531767.1_1_8:146017155-146017514:-|nuORF;;ENST00000528296.5_1_8:146015816-146017457:-|nuORF;;ENSG00000161016|ENST00000528957|RPL8;;ENST00000525232.5_1_8:146017155-146017514:-|nuORF 5.580296675364177 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5209 27.967 800.0 203720.0 25 0 27344.0 + 25422 NEDPEGSRITY 11 127 640.7915577374486 1279.568562541697 2 640.7914306521416 MULTI CID FTMS 0 0 0 5198 96356.4375 0.5217934300083775 -1 0.0853042602539062 11 Unmodified _NEDPEGSRITY_ ENSG00000124596|ENST00000424266|OARD1;ENST00000465893.1_1_6:41037763-41039373:-|nuORF 80.89551112106177 0.0069906411478691 1 {[QD]|[EN]|[WG]|[KD]|[RS]}DPEGSR{I|L}TY 11 0 + 62.572 0.0 0.0 4.8901 4.8901 80.728 0.0 0.0 0.0 38.571435643821246 13.080923170097831 13.080923170097831 6.575773191777927 0 1.6069758080123702 0.0 0.8494850021680094 0.3807196863200844 + + {[QD]|[EN]|[WG]|[KD]|[RS]}DPEGSR{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}DPWSR{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}DP{[DS]|[MA]|[CV]|TT}AR{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}DY{[RE]|[WV]}[KT][EP];[EP]D[KG]NP{M(Oxidation (M))|F}{I|L}[YT];[DP][WK]NP{M(Oxidation (M))|F}{I|L}[YT];[DP]E[KG]NP{M(Oxidation (M))|F}{I|L}[YT];{[QD]|[EN]|[WG]|[KD]|[RS]}DY{[RE]|[WV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P[KG]NP{M(Oxidation (M))|F}{I|L}[YT];[EP]D[KG]GGP{M(Oxidation (M))|F}{I|L}[YT] 4.8901;4.3762;4.0118;1.598;1.562;1.3857;1.2392;1.1336;0.89675;0.84855 +;-;-;-;-;-;-;-;-;- + 644 + 1 2.129 124905.8 0.5799999833106995 1888 3319 5198 DOHH2_400M_050219_1,5209 DOHH2_400M_050219_1,5209,NEDPEGSRITY True True NEDPEGSRITY 27.967229 640.791430652142 1135069.125 5198.0 ENSG00000124596|ENST00000424266|OARD1;;ENST00000465893.1_1_6:41037763-41039373:-|nuORF 7.836510022481282 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5210 27.969 92.0 415390.0 25 0 55678.0 -1 0 76 486.253930615743 485.246654149143 1 486.2539550662041 MULTI CID FTMS 0 0 0 5198 474474.03125 0.5792568091580081 2 -0.1610336303710937 12 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 3 -1 11.879 0.0 0.0 2.4481 0.0 0.0 0.0 126.055466975568 126.055466975568 0.6246936830414995 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 2.4481 - 10 1 2.129 35508.2 1.0 1889 3319 5198 DOHH2_400M_050219_1,5210 DOHH2_400M_050219_1,5210, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5211 27.976 262.0 249660.0 25 0 27614.0 + 16503 EESNYELEGKIK 12 109 480.2400541785602 0 480.2399169802666 PEAK CID FTMS 0 0 0 5198 184483.6875 1.0 0 0.0 13 Unmodified _KALQNCPW_ ENSG00000186395|ENST00000269576|KRT10;P13645;P02535-1 5.760428011301431 0.5786759180849727 1 {M(Oxidation (M))|F}N 2 7 10.174 0.0 0.0 1.0615 0.0 0.0 612.2903672909111 82.06681238345936 694.3571796743705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2215141619232908 {M(Oxidation (M))|F}N 1.0615 - 58 + 1 2.129 53773.9 1.0 1890 3319 5198 DOHH2_400M_050219_1,5211 DOHH2_400M_050219_1,5211,KALQNCPW False False EESNYELEGKIK 27.975566 480.239916980267 761181.8125 5198.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 2.840505520502726 3.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5212 27.98 207.0 264880.0 25 0 21259.0 -1 0 95 532.2978919855241 531.290615518924 1 532.2964355349541 MULTI CID FTMS 0 0 0 5198 173105.171875 0.3387001547009782 34 -1.6059703826904297 14 1 P 1 -1 9.3971 0.0 0.0 1.7687 0.0 0.0 416.22695387517246 0.0 416.22695387517246 0.0 0.4177302572503727 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.7687 - 12 + 1 2.129 47667.8 1.0 1891 3319 5198 DOHH2_400M_050219_1,5212 DOHH2_400M_050219_1,5212, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5214 27.985 76.0 620480.0 25 0 27608.0 + 36909 TESLSGCPEEK 11 83 590.2660268757545 1178.517500818309 2 590.2664062380791 MULTI CID FTMS 0 0 0 5213 337827.9375 0.1319104623424919 3 -0.2084789276123047 1 Unmodified _TESLSGCPEEK_ REV__ENSG00000188895|ENST00000398532|MSL1;REV__nc|ENSG00000188895|Q68DK7-2|MSL1;REV__nc|ENSG00000188895|Q68DK7-3|MSL1 26.268140514670165 0.4754186812857754 1 [DN]S[KC]VDAAEK 11 -1 + 47.194 0.0 0.0 4.0046 4.0046 78.191 0.0 0.0 0.0 1.504928410806869 8.305399148786876 1.504928410806869 7.03544151709788 0 2.0356668758921828 0.0 0.3252574989159953 0.2887254899964357 [DN]S[KC]VDAAEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AADGGDAAEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AADGG[KS]D[PS];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AADGG[KS]S[DP];{[DS]|[MA]|[CV]|TT}[KS]DGGWA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DS]|[MA]|[CV]|TT}[KS]DGGDAA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DS]|[MA]|[CV]|TT}D[KS]GGWA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ET]|[MV]}[WM]VDAA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[PS]D[{M(Oxidation (M))|F}T]VDAA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ET]|[MV]}S[KS]GGWA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.0046;3.4076;3.2998;2.8117;2.7832;2.7284;2.6338;2.5266;2.3183;2.1457 -;-;-;-;-;-;-;-;-;- 322 + 1 2.137 43454.8 1.0 1892 3320 5213 DOHH2_400M_050219_1,5214 DOHH2_400M_050219_1,5214,TESLSGCPEEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5215 27.999 800.0 37533.0 25 0 3516.3 -1 ECKECRKCFYQ 11 59 775.8296453399473 1549.6447377466943 2 775.8300048708916 MULTI CID FTMS 0 0 0 5213 22729.50390625 0.1444187992363919 3 -0.2084789276123047 2 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 14.40537977576856 0.7354982482299568 1 [YE][C(Carbamidomethyl (C))K]AQ{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}YQ 12 -1 [YE][C(Carbamidomethyl (C))K]AQ{[QD]|[EN]|[WG]|[KD]|[RS]}A + + 43.06 2.3418 0.21417 2.7787 2.7787 50.021 0.0 0.0 0.0 0.0 31.80064645515668 0.0 0.0 0 1.0 0.0 0.0 0.6861818737241735 [YE][C(Carbamidomethyl (C))K]AQ{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}YQ 2.7787 - 163 + 1 2.137 27602.7 0.5699999928474426 1893 3320 5213 DOHH2_400M_050219_1,5215 DOHH2_400M_050219_1,5215,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5216 28.001 91.0 873480.0 25 0 53016.0 + 17997 KRWESERVL 9 101 401.5597920608485 1201.6575467827456 3 401.5592834353447 MULTI CID FTMS 0 0 0 5213 477005.4375 0.5257530644813077 -1 0.085245132446289 3 Unmodified _KRWESERVL_ ENSG00000185009|ENST00000355264|AP3M1;ENST00000480373.1_1_10:75888732-75889691:-|nuORF 35.61225514009592 0.0995432151795903 1 KRWESE[RV]{I|L} 9 0 + 53.787 0.0 0.0 4.4761 4.4761 77.327 0.0 0.0 0.0 40.68787992030592 3.300756084811809 3.300756084811809 4.436974992327123 0 0.1694451763165201 0.0 1.4802046884880935 0.0 + + KRWESE[RV]{I|L};K[Q{I|L}]TESE[RV]{I|L};{I|L}[KQ]TESE[RV]{I|L};KRWE{I|L}{M(Oxidation (M))|F}[NP]{I|L};K[VG]WE{I|L}{M(Oxidation (M))|F}[NP]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YV]{I|L}[C(Carbamidomethyl (C))R]HK 4.4761;4.1068;3.5014;3.1073;2.341;0.025018 +;-;-;-;-;- + 298 + 1 2.137 64831.5 1.0 1894 3320 5213 DOHH2_400M_050219_1,5216 DOHH2_400M_050219_1,5216,KRWESERVL True True KRWESERVL 28.000999 401.559283435345 4962200.5 5213.0 ENST00000480373.1_1_10:75888732-75889691:-|nuORF;;ENSG00000185009|ENST00000355264|AP3M1 4.285207589467366 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5217 28.003 120.0 904750.0 25 0 83390.0 + 820 AETDERRLL 9 93 368.2000508277754 1101.5783230835264 3 368.1992675662041 MULTI CID FTMS 0 0 0 5213 385801.90625 0.1200379297604231 -3 0.1958255767822265 4 Unmodified _AETDERRLL_ ENST00000337288.9_2_2:96874284-96874539:-|nuORF 45.69961567697781 0.0497987121815769 1 AETDERR{I|L}{I|L} 9 0 + 72.027 0.0 0.0 6.5386 6.5386 86.493 0.0 0.0 0.0 59.80889708950329 6.013962538185211 6.013962538185211 6.682437647924203 0 0.3807196863200844 2.0 0.4247425010840047 0.3494850021680094 + + AETDERR{I|L}{I|L};AE{I|L}C{I|L}[DG]R{I|L}{I|L};AE{I|L}CE[VG]R{I|L}{I|L};A{I|L}EC{I|L}[DG]R{I|L}{I|L};A{I|L}ECE[VG]R{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GD{I|L}[DG]R{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GDE[VG]R{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WD]RR{I|L}{I|L} 6.5386;5.9319;5.6587;3.8431;3.5698;1.5671;1.2939;0.068829 +;-;-;-;-;-;-;- + 149 + 1 2.137 90505.3 1.0 1895 3320 5213 DOHH2_400M_050219_1,5217 DOHH2_400M_050219_1,5217,AETDERRLL True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5218 28.017 800.0 195920.0 25 0 15844.0 + 23961 LVSEYQQYQD 10 176 636.7910878885755 1271.5676228439509 2 636.7911865115166 MULTI CID FTMS 0 0 0 5213 182454.390625 1.0 0 0.0 5 Unmodified _LVSEYQQYQD_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000290377.9_1_9:141071128-141071713:+|nuORF;ENST00000402141.1_1_6:143757385-143757844:+|nuORF;ENST00000415481.1_1_1:809210-809726:+|nuORF;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000427668.1_1_1:53461605-53461695:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3 96.36657018975838 0.0088773658760237 1 [AG]YQDT{I|L}VYQD 11 8 + 69.352 0.0 0.0 5.454 5.454 80.506 0.0 0.0 0.0 4.0550636488431735 9.189918721537836 4.0550636488431735 4.0550636488431735 0 1.2064608101803795 1.3979400086720375 1.0044321917401078 0.7302046884880937 [AG]YQDT{I|L}VYQD;[{I|L}V]SEYQQYQD;[AG]QYDT{I|L}VYQD;[YQ]QDT{I|L}VYQD;[AG]YQ[KA]TQYQD;[{I|L}V]SEYQ[AG]YQD;[AG]Y[AG]DT{I|L}VYQD;[AG]Y{[ES]|[DT]|[{I|L}C]}{I|L}VQYQD;[YQ][AG]DT{I|L}VYQD;[{I|L}V]SEY[AG]QYQD 5.454;5.1351;4.9058;4.8396;4.4227;4.4144;4.1619;4.1247;4.1189;4.115 -;+;-;-;-;-;-;-;-;- + 2873 1 2.137 121389.6 0.7799999713897705 1896 3320 5213 DOHH2_400M_050219_1,5218 DOHH2_400M_050219_1,5218,LVSEYQQYQD True True LVSEYQQYQD 28.017328 636.791186511517 1196918.375 5213.0 ENSG00000261456|ENST00000568584|TUBB8;;ENSG00000137267|ENST00000333628|TUBB2A;;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;;ENSG00000104833|ENST00000264071|TUBB4A;;ENSG00000196230|ENST00000327892|TUBB;;ENST00000427668.1_1_1:53461605-53461695:+|nuORF;;nc|ENSG00000258947|Q13509-2|TUBB3;;ENST00000415481.1_1_1:809210-809726:+|nuORF;;ENSG00000176014|ENST00000317702|TUBB6;;ENSG00000258947|ENST00000315491|TUBB3;;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;;ENSG00000137285|ENST00000259818|TUBB2B;;ENSG00000188229|ENST00000340384|TUBB4B;;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;;ENST00000402141.1_1_6:143757385-143757844:+|nuORF;;ENSG00000173213|ENST00000308911|TUBB8B;;ENST00000290377.9_1_9:141071128-141071713:+|nuORF 7.5755659739176435 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5219 28.022 232.0 356930.0 25 0 27053.0 + 25546 NESEEVRQF 9 126 569.2622291154292 1136.5099052976584 2 569.2618896365166 MULTI CID FTMS 0 0 0 5213 157383.546875 0.3901679831409482 -1 0.085245132446289 6 Unmodified _NESEEVRQF_ ENSG00000126247|ENST00000246533|CAPNS1 78.7280429016045 0.0178249292250809 1 {[QD]|[EN]|[WG]|[KD]|[RS]}SEEV 6 3 41.203 0.0 0.0 3.6254 0.0 0.0 0.0 446.2158083712167 446.2158083712167 22.323937598229687 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.805462187404089 0.0 + {[QD]|[EN]|[WG]|[KD]|[RS]}SEEV 3.6254 + + 564 + 1 2.137 67349.3 1.0 1897 3320 5213 DOHH2_400M_050219_1,5219 DOHH2_400M_050219_1,5219,NESEEVRQF True True NESEEVRQF 28.021695 569.261889636517 2163984.75 5213.0 ENSG00000126247|ENST00000246533|CAPNS1 5.793239116668701 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5220 28.035 799.0 262970.0 25 0 8718.0 + 8206 EPSQMLKHAV 10 226 380.5339366200696 1138.5799804604087 3 380.5335265994072 MULTI CID FTMS 0 0 0 5213 136019.859375 1.0 0 0.0 7 Unmodified _EPSQMLKHAV_ ENSG00000168036|ENST00000349496|CTNNB1 22.774965066869 0.4569865297271528 1 EP{[QS]|[NT]}M{I|L}KHG{I|L} 10 2 + 27.942 0.0 0.0 2.4541 2.4541 69.774 0.0 0.0 0.0 8.789850105233295 2.730012720637376 2.730012720637376 2.730012720637376 0 0.1803115997617927 0.0 0.0 0.3054621874040891 EP{[QS]|[NT]}M{I|L}KHG{I|L};EP{[QS]|[NT]}M{I|L}KHAV;EP{[QS]|[NT]}M{I|L}KHVA;EP{[QS]|[NT]}M{I|L}KVHA 2.4541;2.2144;1.9136;1.3754 -;+;-;- + 249 + 1 2.137 169663.2 1.0 1898 3320 5213 DOHH2_400M_050219_1,5220 DOHH2_400M_050219_1,5220,EPSQMLKHAV False True EPSQMLKHAV 28.035497 380.533526599407 592496.5625 5213.0 ENSG00000168036|ENST00000349496|CTNNB1 2.690759817759196 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5221 28.048 721.0 201990.0 25 0 29093.0 + + 34189 ISNVKTAL 8 170 423.2590484348087 844.5035439364174 2 423.2593871951103 MULTI CID FTMS 0 0 0 5213 99802.5546875 1.0 0 0.0 8 Unmodified _SLNKASLI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5 34.40172386719151 0.3279500639400574 1 {I|L}SNV 4 -1 46.631 0.0 0.0 5.5217 0.0 0.0 0.0 428.2518099420532 428.2518099420532 32.02684409496328 0.0 0.0 0.0 0 0.6989700043360187 1.5228787452803376 0.0 0.0 {I|L}SNV 5.5217 - 369 + 1 2.137 113264.9 1.0 1899 3320 5213 DOHH2_400M_050219_1,5221 DOHH2_400M_050219_1,5221,SLNKASLI False False ISNVKTAL 28.048003 423.25938719511 512460.40625 5213.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 2.019431193669637 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5222 28.055 340.0 366750.0 25 0 32714.0 + 36695 ESDINSVRY 9 126 542.2401722648542 1082.4657915965083 2 542.2388793826103 MULTI CID FTMS 0 0 0 5213 98932.9921875 1.0 0 0.0 9 Unmodified _TDDERERY_ ENST00000559541.1_1_15:52416976-52428016:-|nuORF;nc|ENSG00000069966|O14775-2|GNB5;ENSG00000069966|ENST00000261837|GNB5;nc|ENSG00000069966|O14775-3|GNB5 38.15118350030904 0.2652218139009398 1 YSA{I|L}DN[HT]Y 9 8 + 63.884 0.0 0.0 5.9017 5.9017 78.537 0.0 0.0 0.0 1.368865538569466 5.862657241447309 1.368865538569466 1.368865538569466 0 0.7614393726401688 2.0 0.9163865622122672 0.3494850021680094 YSA{I|L}DN[HT]Y;{[C(Carbamidomethyl (C))G]|[NC]}D{I|L}NSVRY;YSA[Y{M(Oxidation (M))|F}]NRY;YSA{I|L}DN[WQ]S;{[C(Carbamidomethyl (C))G]|[NC]}D{I|L}GGSVRY;YS[DP]P{[DA]|[EG]}RY;YS[W{I|L}]N[HT]Y;YSA[Y{M(Oxidation (M))|F}]GGRY;YSA{I|L}DGG[HT]Y;YSA{I|L}DGG[WQ]S 5.9017;5.7752;5.5919;5.3601;4.9246;4.8989;4.8461;4.7362;4.7282;4.5094 -;-;-;-;-;-;-;-;-;- 1270 + 1 2.137 99099.7 1.0 1900 3320 5213 DOHH2_400M_050219_1,5222 DOHH2_400M_050219_1,5222,TDDERERY False True ESDINSVRY 28.055345 542.23887938261 16709637.0 5213.0 ENST00000559541.1_1_15:52416976-52428016:-|nuORF;;nc|ENSG00000069966|O14775-2|GNB5;;ENSG00000069966|ENST00000261837|GNB5;;nc|ENSG00000069966|O14775-3|GNB5 8.47902250289917 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5224 28.06 17.0 3923200.0 25 0 521440.0 + 27823 RPRGPEGVGSL 11 64 375.5436275768271 1123.6090533306813 3 375.5431091189384 MULTI CID FTMS 0 0 0 5223 2395427.75 0.9295454684358766 1 -0.0766277313232421 1 Unmodified _PLPWQQRSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 28.49450938151212 0.1686335738423394 1 GVGS{I|L} 5 7 44.993 0.0 0.0 4.0043 0.0 0.0 692.372852600967 0.0 692.372852600967 0.0 26.72167511924052 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 GVGS{I|L} 4.0043 - 69 1 2.137 57971.1 1.0 1901 3321 5223 DOHH2_400M_050219_1,5224 DOHH2_400M_050219_1,5224,PLPWQQRSL False False RPRGPEGVGSL 28.060093 375.543109118938 16590196.0 5223.0 ENST00000523767.5_1_5:149877380-149900454:+|nuORF 8.195375442504883 3.0 False 11.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 5225 28.062 93.0 722900.0 25 0 90131.0 + 2128 APVPAPERK 9 72 482.7824454486659 963.5503379641318 2 482.7822143435478 MULTI CID FTMS 0 0 0 5223 626415.4375 0.8775258869623148 1 -0.0766277313232421 2 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 19.256988751693697 0.3154191944385105 1 [PA]APVP 6 -1 55.763 0.0 0.0 5.7872 0.0 0.0 0.0 428.22821985416255 428.22821985416255 31.32576888900239 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.0 0.0 [PA]APVP 5.7872 - 48 + 1 2.137 56583.1 1.0 1902 3321 5223 DOHH2_400M_050219_1,5225 DOHH2_400M_050219_1,5225,APVPAPERK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5226 28.063 27.0 3029500.0 25 0 252750.0 + 6777 EEAEIIRKY 9 103 384.20841859597897 1149.603426388137 3 384.2081481814384 MULTI CID FTMS 0 0 0 5223 1623273.125 0.4271929330544984 -2 0.1610336303710937 3 Unmodified _EEAEIIRKY_ ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;ENST00000490921.5_1_1:226549163-226553858:-|nuORF 22.736283301280096 0.2418982879461534 1 [RK]{I|L}{I|L}EY{[CP]|[EA]}E 9 9 + 36.577 0.0 0.0 3.1817 3.1817 73.868 0.0 0.0 0.0 1.592247869181172 1.8796177910728389 1.592247869181172 4.77121254719663 0 0.0 0.0 0.8494850021680094 0.0 [RK]{I|L}{I|L}EY{[CP]|[EA]}E;[RK]{I|L}{I|L}E{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}E;[RK]{I|L}{I|L}E{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F};[RK]{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[C(Carbamidomethyl (C))N]E;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K[{I|L}A]KY 3.1817;2.7667;2.1353;1.443;1.1384 -;-;-;-;- 165 1 2.137 69474.3 1.0 1903 3321 5223 DOHH2_400M_050219_1,5226 DOHH2_400M_050219_1,5226,EEAEIIRKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5227 28.065 54.0 1286400.0 25 0 68790.0 + 6779 EEAEIIRKY 9 84 575.8086423620995 1149.6027317909989 2 575.8088256716728 MULTI CID FTMS 0 0 0 5223 896772.5 0.4176686037061307 -2 0.1610336303710937 4 Unmodified _EEAEIIRKY_ ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;ENST00000490921.5_1_1:226549163-226553858:-|nuORF 96.11092074494114 0.0124975504059861 1 EEAE{I|L}{I|L}RKY 9 0 + 93.198 0.0 0.0 8.107 8.107 98.287 0.0 0.0 0.0 74.83533175823325 13.46787486224656 13.46787486224656 72.80130979747199 0 1.6861818737241734 2.0 0.4247425010840047 0.6505149978319906 + + EEAE{I|L}{I|L}RKY;[RK]{I|L}{I|L}[Y{M(Oxidation (M))|F}]A[HC];[RK]{I|L}{I|L}{[CP]|[EA]}EEY 8.107;1.7742;1.1157 +;-;- + 104 + 1 2.137 56280.7 1.0 1904 3321 5223 DOHH2_400M_050219_1,5227 DOHH2_400M_050219_1,5227,EEAEIIRKY True True EEAEIIRKY 28.064699 575.808825671673 31772436.0 5223.0 ENST00000490921.5_1_1:226549163-226553858:-|nuORF;;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;;ENSG00000143799|ENST00000366794|PARP1 7.165029366811116 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5228 28.066 67.0 1155400.0 25 0 300690.0 + 821 AETDERRLL 9 67 551.7963373192167 1101.5781217052331 2 551.7963134646416 MULTI CID FTMS 0 0 0 5223 853604.25 0.5193828677978369 -2 0.1610336303710937 5 Unmodified _AETDERRLL_ ENST00000337288.9_2_2:96874284-96874539:-|nuORF 22.736283301280096 0.2418982879461534 1 {I|L}{I|L} 2 7 17.959 0.0 0.0 1.6303 0.0 0.0 0.0 872.3877899474965 872.3877899474965 6.062287920263927 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}{I|L} 1.6303 + + 84 + 1 2.137 67940.6 1.0 1905 3321 5223 DOHH2_400M_050219_1,5228 DOHH2_400M_050219_1,5228,AETDERRLL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5229 28.068 98.0 578770.0 25 0 57156.0 + 8366 ESDINSVRY 9 88 541.759358894448 0 541.7588989138603 PEAK CID FTMS 0 0 0 5223 382958.3125 0.3262039957312029 -2 0.1610336303710937 6 Unmodified _ESDINSVRY_ ENSG00000069966|ENST00000261837|GNB5;ENST00000559541.1_1_15:52416976-52428016:-|nuORF;nc|ENSG00000069966|O14775-2|GNB5;nc|ENSG00000069966|O14775-3|GNB5 47.594388314883695 0.0382481814706656 1 SD{I|L}NSVHD 8 3 52.305 0.0 0.0 4.8363 0.0 0.0 129.04800138088973 82.06685053043202 211.1148519113217 0.0 0.0 0.0 0.0 0 0.5941876774005249 0.0 0.0 0.4247425010840047 SD{I|L}NSVHD 4.8363 - 239 + 1 2.137 51382.3 1.0 1906 3321 5223 DOHH2_400M_050219_1,5229 DOHH2_400M_050219_1,5229,ESDINSVRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5230 28.072 199.0 546340.0 25 0 114680.0 + 6623 EARVRPVL 8 87 470.2898475542918 938.5651421753836 2 470.2899658083916 MULTI CID FTMS 0 0 0 5223 349674.21875 1.0 0 0.0 7 Unmodified _EARVRPVL_ ENST00000546954.1_1_12:120882729-120884155:-|nuORF 23.1484247019978 0.5573009939494978 1 {I|L} 1 7 16.281 0.0 0.0 1.7347 0.0 0.0 807.4703373431555 0.0 807.4703373431555 0.0 5.563025007672874 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {I|L} 1.7347 + + 27 + 1 2.137 89154.0 1.0 1907 3321 5223 DOHH2_400M_050219_1,5230 DOHH2_400M_050219_1,5230,EARVRPVL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5231 28.076 179.0 304140.0 25 0 24085.0 + 7138 EENFPENKEY 10 82 649.7802727901433 1297.5459926470865 2 649.7803222537041 MULTI CID FTMS 0 0 0 5223 284108.71875 0.8476553369403949 2 -0.1326904296875 8 Unmodified _EENFPENKEY_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 57.24910588100465 0.0438022649904578 1 EEN[KP]Y 6 4 39.231 0.0 0.0 3.0234 0.0 0.0 0.0 534.1856160203864 534.1856160203864 17.28855930516417 0.0 0.0 0.0 0 0.5 1.2218487496163564 1.424742501084005 0.3494850021680094 EEN[KP]Y 3.0234 - 381 1 2.137 48037.3 1.0 1908 3321 5223 DOHH2_400M_050219_1,5231 DOHH2_400M_050219_1,5231,EENFPENKEY True True EENFPENKEY 28.07574 649.780322253704 19801699.5 5223.0 ENST00000465029.5_1_2:111419157-111435602:-|nuORF;;nc|ENSG00000169679|O43683-2|BUB1;;ENSG00000169679|ENST00000302759|BUB1;;nc|ENSG00000169679|O43683-3|BUB1 8.887378056844076 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5232 28.082 357.0 224410.0 25 0 17306.0 + 10441 FTENDKEYQEY 11 122 733.309708072743 1464.604863212286 2 733.3098022341728 MULTI CID FTMS 0 0 0 5223 216511.796875 0.688645003759113 -2 0.1610336303710937 9 Unmodified _FTENDKEYQEY_ ENSG00000169612|ENST00000304191|RAMAC;ENSG00000235272|ENST00000444122|RAMACL 105.34515851771124 0.0067849496576515 1 [YE]Q[QT][DV]YQEY 11 7 + 56.858 0.0 0.0 3.8821 3.8821 71.594 0.0 0.0 0.0 1.4603147595986954 11.520057114373294 1.4603147595986954 1.4603147595986954 0 0.6549471895720984 0.0 0.9802046884880936 1.079689690656103 [YE]Q[QT][DV]YQEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QT]E[{M(Oxidation (M))|F}T]YQEY;[YE]{[HG]|PP}E[{M(Oxidation (M))|F}T]YQEY;[YE]{[HG]|PP}EYQT{M(Oxidation (M))|F}EY;{[ET]|[MV]}QQE[{M(Oxidation (M))|F}T]YQEY;[YE]{[HG]|PP}EYQET{M(Oxidation (M))|F}Y;[YE]{[HG]|PP}YQET{M(Oxidation (M))|F}EY;[YQ]E[QT][DV]YQEY;[YE]Q[QT]QET{M(Oxidation (M))|F}EY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QT]Y[DV]YQEY 3.8821;3.7824;3.7463;3.7389;3.6941;3.5847;3.4828;3.4711;3.4615;3.441 -;-;-;-;-;-;-;-;-;- 8383 1 2.137 59179.3 1.0 1909 3321 5223 DOHH2_400M_050219_1,5232 DOHH2_400M_050219_1,5232,FTENDKEYQEY True True FTENDKEYQEY 28.082184 733.309802234173 2040561.125 5223.0 ENSG00000235272|ENST00000444122|RAMACL;;ENSG00000169612|ENST00000304191|RAMAC 9.50334326426188 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5233 28.096 800.0 96074.0 25 0 8002.8 + + -1 STDTSGYGQSSYSSY 15 113 795.3159636337195 1588.617374334239 2 795.3154174685478 MULTI CID FTMS 0 0 0 5223 142437.578125 1.0 0 0.0 10 3 Carbamidomethyl (C) _VYC(Carbamidomethyl (C))C(Carbamidomethyl (C))WHFVC(Carbamidomethyl (C))RC_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 1.3295316138638542 0.8688751186870782 1 {[CA]|SS}ETNSSQ[{M(Oxidation (M))|F}E]HSSY 14 -1 {[CA]|SS}ETN + + 46.029 16.843 3.2503 2.8974 2.8974 50.235 0.0 0.0 0.0 0.0 23.164865596718784 0.0 0.0 0 0.3054621874040891 0.0 1.642159058960253 0.0 {[CA]|SS}ETNSSQ[{M(Oxidation (M))|F}E]HSSY 2.8974 - 5104 + 1 2.137 56393.0 0.6200000047683716 1910 3321 5223 DOHH2_400M_050219_1,5233 DOHH2_400M_050219_1,5233,VYCCWHFVCRC False False STDTSGYGQSSYSSY 28.096034 795.315417468548 948430.1875 5223.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 7.471768061319987 2.0 False 15.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5234 28.105 483.0 260400.0 25 0 25799.0 23233 LSTDPQHHAY 10 101 584.7719933184874 1167.5294337037749 2 584.7726318240166 MULTI CID FTMS 0 0 0 5223 122429.1015625 0.5259821171265846 -1 0.0757884979248046 11 Unmodified _LSTDPQHHAY_ ENSG00000173546|ENST00000308508|CSPG4 12.240655878213236 0.6421556946785427 1 Y[EP]{I|L}[{M(Oxidation (M))|F}E]HAY 9 7 + 53.874 0.0 0.0 4.6144 4.6144 78.718 0.0 0.0 0.0 11.522949032151004 5.400990676322905 5.400990676322905 5.400990676322905 0 1.0 0.0 0.5 0.0 Y[EP]{I|L}[{M(Oxidation (M))|F}E]HAY;[HC][RD][PG]{I|L}HAY;Y[C(Carbamidomethyl (C))N]EV[RN]{I|L}T;Y[C(Carbamidomethyl (C))N]EV[RN]T{I|L} 4.6144;4.1518;0.99693;0.52481 -;-;-;- 127 + 1 2.137 96882.4 1.0 1911 3321 5223 DOHH2_400M_050219_1,5234 DOHH2_400M_050219_1,5234,LSTDPQHHAY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5235 28.114 527.0 277340.0 25 0 21712.0 + 673 AEMNRGSNEW 10 132 597.2531674541538 1192.4917819751074 2 597.2521240115166 MULTI CID FTMS 0 0 0 5223 103620.1875 0.1525550523417874 -3 0.246337890625 12 Unmodified _AEMNRGSNEW_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENST00000568339.5_1_16:85839106-85839475:+|nuORF 75.5705956163825 0.0187571863157879 1 {[CP]|[EA]}MNRGSNEW 10 0 + 51.221 0.0 0.0 4.2953 4.2953 72.525 0.0 0.0 0.0 1.2795778263887885 6.791837322205822 1.2795778263887885 1.2795778263887885 0 1.4291746928241125 0.0 0.0 0.9005149978319906 + + {[CP]|[EA]}MNRGSNEW;[MT][C(Carbamidomethyl (C))K]HMAEW;[WE]{[NV]|[RG]}EMAEW;{[CP]|[EA]}MNRGSGGEW;[PS]M{[NV]|[RG]}EMAEW;{[QD]|[EN]|[WG]|[KD]|[RS]}{[RE]|[WV]}EMAEW;[PS]{M(Oxidation (M))|F}NRGSNEW;[MT][C(Carbamidomethyl (C))K][PG]NAEW;{[QD]|[EN]|[WG]|[KD]|[RS]}[HN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}AEW;[MT]TAMH[HN][HN] 4.2953;4.188;4.169;3.5268;3.5165;3.3711;3.2437;3.0821;3.0374;3.0348 +;-;-;-;-;-;-;-;-;- + 584 1 2.137 110241.6 1.0 1912 3321 5223 DOHH2_400M_050219_1,5235 DOHH2_400M_050219_1,5235,AEMNRGSNEW True True AEMNRGSNEW 28.113857 597.252124011517 7556986.0 5223.0 ENST00000568339.5_1_16:85839106-85839475:+|nuORF;;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;;ENSG00000131143|ENST00000253452|COX4I1;;ENST00000564648.1_1_16:85839106-85840477:+|nuORF 7.699204285939534 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5236 28.128 800.0 98737.0 25 0 6111.3 -1 QGSWFCPSGWF 11 118 679.7829346945315 0 679.7833740115166 PEAK CID FTMS 0 0 0 5223 85728.3515625 0.9595300648082444 -1 0.0757884979248046 13 Carbamidomethyl (C) _QGSWFC(Carbamidomethyl (C))PSGWF_ ENST00000468828.5_1_1:161183488-161183676:+|nuORF 13.042465956692816 0.4221659143281722 1 ANQQAED 7 -1 61.63 0.0 0.0 4.5398 0.0 0.0 165.07858793831184 433.1456266949654 598.2242146332773 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.805462187404089 0.805462187404089 ANQQAED 4.5398 - 381 + 1 2.137 62705.5 0.5400000214576721 1913 3321 5223 DOHH2_400M_050219_1,5236 DOHH2_400M_050219_1,5236,QGSWFCPSGWF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5237 28.132 159.0 437900.0 25 0 77773.0 14012 IAETVLAI 8 81 415.253442696867 0 415.2537109255791 PEAK CID FTMS 0 0 0 5223 353829.5625 0.2126847226700161 11 -0.5272731781005859 14 Unmodified _IAETVLAI_ ENSG00000112079|ENST00000229812|STK38 5.760428011301431 0.5786759180849727 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.137 58216.7 1.0 1914 3321 5223 DOHH2_400M_050219_1,5237 DOHH2_400M_050219_1,5237,IAETVLAI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5239 28.137 78.0 633990.0 25 0 69482.0 + 29136 QETSFTKEAY 10 77 602.2798718857282 1202.5451908382563 2 602.2800781130791 MULTI CID FTMS 0 0 0 5238 606367.75 0.297937530271638 2 -0.1189994812011718 1 Unmodified _QETSFTKEAY_ ENSG00000133112|ENST00000530705|TPT1;ENST00000533567.5_1_13:45912892-45914385:-|nuORF;nc|ENSG00000133112|P13693-2|TPT1 33.4449034751529 0.2267874087365337 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TS{M(Oxidation (M))|F}T 6 4 25.45 0.0 0.0 2.1164 0.0 0.0 0.0 506.2271332506305 506.2271332506305 7.491596866368013 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TS{M(Oxidation (M))|F}T 2.1164 + + 237 + 1 2.137 40591.8 1.0 1915 3322 5238 DOHH2_400M_050219_1,5239 DOHH2_400M_050219_1,5239,QETSFTKEAY False True QETSFTKEAY 28.136719 602.280078113079 21266422.0 5238.0 ENSG00000133112|ENST00000530705|TPT1;;nc|ENSG00000133112|P13693-2|TPT1;;ENST00000533567.5_1_13:45912892-45914385:-|nuORF 8.914019266764322 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5240 28.151 800.0 262180.0 25 0 15343.0 + 33108 SESNFARAY 9 181 522.7405478627088 1043.4665427922175 2 522.7407714724541 MULTI CID FTMS 0 0 0 5238 81061.84375 0.1465757226823642 2 -0.1189994812011718 2 Unmodified _SESNFARAY_ ENSG00000062485|ENST00000351328|CS;ENST00000546621.5_1_12:56668606-56679804:-|nuORF;ENST00000547449.1_1_12:56676173-56676733:-|nuORF;ENST00000547912.1_1_12:56676173-56676410:-|nuORF 32.78568957990786 0.1150597335874693 1 {[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}ARAY 9 0 + 27.245 0.0 0.0 2.611 2.611 78.023 0.0 0.0 0.0 14.145709056482062 7.081558493715406 7.081558493715406 9.208187539523756 0 0.8703715150305282 0.0 0.0 0.25 + + {[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}ARAY;{[ES]|[DT]|[{I|L}C]}SGG{M(Oxidation (M))|F}ARAY;{[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SV;{[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}[HQ]PV;{[ES]|[DT]|[{I|L}C]}K[C(Carbamidomethyl (C))M]RAY;{[ES]|[DT]|[{I|L}C]}SGG{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SV;{[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}[RH]AP;{[QN]|[E{I|L}]|[KN]}E[YT]RAY;{[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}[HQ]VP 2.611;1.7285;1.2565;0.64933;0.51352;0.374;0.3291;0.31301;0.2716 +;-;-;-;-;-;-;-;- + 470 + 1 2.137 162767.9 0.800000011920929 1916 3322 5238 DOHH2_400M_050219_1,5240 DOHH2_400M_050219_1,5240,SESNFARAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5241 28.157 345.0 313770.0 25 0 18951.0 + 6217 DTMKKFKSL 9 142 549.304784628613 1096.595016324026 2 549.3046142458916 MULTI CID FTMS 0 0 0 5238 186812.25 1.0 0 0.0 3 Unmodified _DTMKKFKSL_ ENSG00000133398|ENST00000255764|MED10;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 94.90867108109512 0.0129882248954091 1 DTMKK{M(Oxidation (M))|F}KS{I|L} 9 0 + 95.051 0.0 0.0 8.6679 8.6679 96.302 0.0 0.0 0.0 76.17752534518482 11.271211393095244 11.271211393095244 16.192803136799157 0 2.3723637474483468 1.6989700043360187 0.5189301784845296 0.0 + + DTMKK{M(Oxidation (M))|F}KS{I|L};{I|L}CMKK{M(Oxidation (M))|F}KS{I|L};{[ES]|[DT]|[{I|L}C]}MKK{M(Oxidation (M))|F}KS{I|L};[MT]DKK{M(Oxidation (M))|F}KS{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}KK{M(Oxidation (M))|F}KS{I|L};[MT][RK]S{M(Oxidation (M))|F}KS{I|L};{I|L}[H{I|L}][HC]{M(Oxidation (M))|F}KS{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}K{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}KS{I|L};{[CT]|[{M(Oxidation (M))|F}G]}RRS{M(Oxidation (M))|F}KS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]K{M(Oxidation (M))|F}KS{I|L} 8.6679;7.1912;5.4646;5.0943;4.1999;3.8078;3.6658;3.2834;3.1501;3.097 +;-;+;-;-;-;-;-;-;- + 530 + 1 2.137 83452.6 1.0 1917 3322 5238 DOHH2_400M_050219_1,5241 DOHH2_400M_050219_1,5241,DTMKKFKSL True True DTMKKFKSL 28.156796 549.304614245892 1024655.3125 5238.0 ENSG00000133398|ENST00000255764|MED10;;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 6.089066982269287 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5242 28.16 192.0 453460.0 25 0 38167.0 + 17970 KRILEPDDF 9 117 378.2041613398276 1131.5906546196827 3 378.2031738162041 MULTI CID FTMS 0 0 0 5238 186430.8125 1.0 0 0.0 4 Unmodified _KRILEPDDF_ ENSG00000133884|ENST00000528416|DPF2;ENST00000530973.1_1_11:65108994-65113348:+|nuORF 10.073929032068715 0.563993802247229 1 [HC]AE{I|L}{I|L}[RK]Y 9 9 + 50.64 0.0 0.0 4.4751 4.4751 87.49 0.0 0.0 0.0 35.41370528406922 12.491596866368011 12.491596866368011 45.939943356093806 0 0.7742275032520141 0.0 0.5 0.805462187404089 [HC]AE{I|L}{I|L}[RK]Y;[RK]{I|L}{I|L}E{[ES]|[DT]|[{I|L}C]}EE 4.4751;0.41534 -;- 96 + 1 2.137 70231.1 1.0 1918 3322 5238 DOHH2_400M_050219_1,5242 DOHH2_400M_050219_1,5242,KRILEPDDF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5243 28.174 800.0 167360.0 25 0 7156.9 -1 RPCPWNYGQF 10 123 662.7995525009707 1323.5845520687412 2 662.8002197146416 MULTI CID FTMS 0 0 0 5238 89122.453125 0.1748245405989186 -4 0.3229656219482422 5 Carbamidomethyl (C) _RPC(Carbamidomethyl (C))PWNYGQF_ ENSG00000104055|ENST00000220420|TGM5;nc|ENSG00000104055|O43548-2|TGM5 32.30548876998284 0.2428506522065767 1 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F} 13 -1 + 126.32 0.0 0.0 9.5437 9.5437 84.566 0.0 0.0 0.0 10.6729788506875 16.642078980768062 10.6729788506875 1.2190053242622412 0 1.0228787452803376 1.154901959985743 0.3494850021680094 2.4049471895720984 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F} 9.5437;9.4516;8.8582;8.8582;8.8582;8.7661;8.7661;8.7661;8.7646;8.7542 -;-;-;-;-;-;-;-;-;- 6434 1 2.137 100269.7 0.550000011920929 1919 3322 5238 DOHH2_400M_050219_1,5243 DOHH2_400M_050219_1,5243,RPCPWNYGQF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5244 28.188 800.0 110030.0 25 0 14280.0 + 24081 LYFPLWFFFSY 11 95 765.3761656114426 0 765.3769409060478 PEAK CID FTMS 0 0 0 5238 116571.5 0.9264714748603804 1 -0.0560626983642578 6 Unmodified _LYFPLWFFFSY_ REV__ENSG00000157800|ENST00000326232|SLC37A3;REV__ENST00000477571.5_1_7:139997281-140048561:-|nuORF;REV__ENST00000487319.1_1_7:140048309-140048561:-|nuORF;REV__nc|ENSG00000157800|Q8NCC5-2|SLC37A3;REV__nc|ENSG00000157800|Q8NCC5-3|SLC37A3 3.2813086475875832 0.4761840153648598 1 YS{I|L}QS 5 -1 44.795 0.0 0.0 2.9302 0.0 0.0 782.3783555375352 165.06699548892814 947.4453510264632 0.0 0.0 0.0 0.0 0 0.0 0.0 1.555462187404089 0.5796896906561032 YS{I|L}QS 2.9302 - 344 + 1 2.137 66294.0 0.5699999928474426 1920 3322 5238 DOHH2_400M_050219_1,5244 DOHH2_400M_050219_1,5244,LYFPLWFFFSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5246 28.193 53.0 830630.0 25 0 79668.0 + 32835 SEGNITKQL 9 84 495.2667330355992 988.5189131379984 2 495.2668029665947 MULTI CID FTMS 0 0 0 5245 1020772.25 0.5678655466111766 8 -0.3403472900390625 1 Unmodified _SEGNITKQL_ chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;nc|ENSG00000111913|Q9Y4F9|RIPOR2 76.82478488871298 0.0184607444814265 1 {[ES]|[DT]|[{I|L}C]}GN{I|L}TKQ{I|L} 9 0 + 61.358 0.0 0.0 6.2071 6.2071 90.842 0.0 0.0 0.0 31.220070590294483 13.46787486224656 13.46787486224656 12.703037561203844 0 1.6906140654642814 0.7958800173440752 0.2887254899964357 0.7742275032520141 + + {[ES]|[DT]|[{I|L}C]}GN{I|L}TKQ{I|L};{[ES]|[DT]|[{I|L}C]}GN{I|L}TK[AG]{I|L} 6.2071;4.922 +;- + 248 + 1 2.133 39841.1 1.0 1921 3323 5245 DOHH2_400M_050219_1,5246 DOHH2_400M_050219_1,5246,SEGNITKQL True True SEGNITKQL 28.193233 495.266802966595 5937540.5 5245.0 nc|ENSG00000111913|Q9Y4F9|RIPOR2;;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;;chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;;ENSG00000111913|ENST00000643898|RIPOR2 4.559521516164144 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5247 28.196 106.0 583200.0 25 0 188500.0 19460 LFFFFKYL 8 56 562.8115434164378 1123.6085338996754 2 562.8122436404228 MULTI CID FTMS 0 0 0 5245 428712.40625 0.3214826062658799 3 -0.1362380981445312 2 Unmodified _LFFFFKYL_ ENST00000535340.5_1_11:18591643-18610207:-|nuORF 7.289230182591677 0.7800870086367542 1 {I|L} 1 7 11.259 0.0 0.0 1.002 0.0 0.0 992.5134696680332 0.0 992.5134696680332 0.0 1.7951097132083405 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.002 + + 12 + 1 2.133 54534.4 1.0 1922 3323 5245 DOHH2_400M_050219_1,5247 DOHH2_400M_050219_1,5247,LFFFFKYL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5248 28.197 75.0 814300.0 25 0 111580.0 42111 VRNLINVRNV 10 83 399.57902973451337 1195.71525980374 3 399.5789367556572 MULTI CID FTMS 0 0 0 5245 507579.34375 1.0 0 0.0 3 Unmodified _VRNLINVRNV_ ENST00000590993.1_1_19:36883752-36884112:-|nuORF 3.876331618118854 0.7087061897849828 1 VA 2 9 18.583 0.0 0.0 1.5542 0.0 0.0 0.0 1022.5875201141066 1022.5875201141066 5.088643834802156 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA 1.5542 - 30 + 1 2.133 52684.9 1.0 1923 3323 5245 DOHH2_400M_050219_1,5248 DOHH2_400M_050219_1,5248,VRNLINVRNV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5249 28.2 160.0 467690.0 25 0 44523.0 + -1 DPMKARVVL 9 101 522.7976191415355 1043.580685349871 2 522.7972900271416 MULTI CID FTMS 0 0 0 5245 322481.875 0.496333514851547 -2 0.1326904296875 4 Oxidation (M) _DPM(Oxidation (M))KARVVL_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 39.94969957227396 0.0757326808254658 1 DP{M(Oxidation (M))|F}KARVV{I|L} 9 -1 + 47.506 0.0 0.0 4.5522 4.5522 87.177 0.0 0.0 0.0 26.18615004632984 3.895884795423015 3.895884795423015 28.86221244810015 0 0.9124379954164592 1.6989700043360187 0.0 0.0 DP{M(Oxidation (M))|F}KARVV{I|L};{[TV]|[{I|L}S]}[{I|L}P][RK]CD{I|L};[PS]{I|L}{I|L}[RK]CD{I|L} 4.5522;1.7865;0.53984 +;-;- + 106 + 1 2.133 63191.5 1.0 1924 3323 5245 DOHH2_400M_050219_1,5249 DOHH2_400M_050219_1,5249,DPMKARVVL False False DPMKARVVL 28.200394 522.797290027142 11090455.5 5245.0 ENSG00000143742|ENST00000304786|SRP9;;nc|ENSG00000143742|P49458-2|SRP9 9.134529908498129 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5250 28.207 353.0 171510.0 25 0 16377.0 8615 EVEEDEYKAFY 11 87 711.3077092276643 1420.6008655221283 2 711.3074828982353 MULTI CID FTMS 0 0 0 5245 287691.59375 0.4561945039800248 2 -0.1204566955566406 5 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 1 [QA]HDEAQAGNA{M(Oxidation (M))|F}Y 13 9 + 77.212 0.0 0.0 5.4352 5.4352 79.015 0.0 0.0 0.0 5.127974464358744 59.19866321005191 5.127974464358744 3.0102999566398125 0 0.8182503180159344 0.0 0.7059771852360797 0.8494850021680094 [QA]HDEAQAGNA{M(Oxidation (M))|F}Y;[QA]HDAEQAGNA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDAEQQNA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]AGNA{M(Oxidation (M))|F}Y;[QA]HDEAQAGGGA{M(Oxidation (M))|F}Y;[QA]HDAEQNQA{M(Oxidation (M))|F}Y;[QA]HDAE[AG]AGNA{M(Oxidation (M))|F}Y;[QA]HDAEQAGGGA{M(Oxidation (M))|F}Y 5.4352;5.2233;5.1795;4.9676;4.9676;4.7965;4.7965;4.7557;4.5846;4.5846 -;-;-;-;-;-;-;-;-;- 3282 1 2.133 47978.5 1.0 1925 3323 5245 DOHH2_400M_050219_1,5250 DOHH2_400M_050219_1,5250,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5251 28.21 185.0 306970.0 25 0 24573.0 + 7163 EENVQSSLL 9 98 509.75406004482494 1017.49356715645 2 509.7556945681572 MULTI CID FTMS 0 0 0 5245 194059.125 1.0 0 0.0 6 Unmodified _EENVQSSLL_ REV__ENSG00000182263|ENST00000333129|FIGN 26.88365393820708 0.1891292719743517 1 EENH[YT]{I|L}{I|L} 8 -1 + 23.337 0.0 0.0 2.2936 2.2936 74.271 0.0 0.0 0.0 7.17416557876248 1.4534460958990714 1.4534460958990714 7.17416557876248 0 0.4163865622122673 1.6989700043360187 0.0 0.0 EENH[YT]{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}P{[C(Carbamidomethyl (C))E]|[WC]}K{I|L}{I|L} 2.2936;1.5885 -;- 112 + 1 2.133 48958.5 1.0 1926 3323 5245 DOHH2_400M_050219_1,5251 DOHH2_400M_050219_1,5251,EENVQSSLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5252 28.224 800.0 173160.0 25 0 19326.0 + -1 EYRWECMKRYP 11 94 809.3686068714533 1616.7226608097064 2 809.3683959841728 MULTI CID FTMS 0 0 0 5245 131793.78125 0.9540002730303164 -1 0.0560626983642578 7 Carbamidomethyl (C) _EYRWEC(Carbamidomethyl (C))MKRYP_ REV__ENSG00000165899|ENST00000547103|OTOGL 0.3070304955306653 0.8736993455979228 1 HDEAQQNA{M(Oxidation (M))|F}YQ 11 -1 73.189 0.0 0.0 4.527 0.0 0.0 267.15828139472814 0.0 267.15828139472814 0.0 51.35333955031335 0.0 0.0 0 1.548455006504028 0.0 0.0 1.1989700043360187 HDEAQQNA{M(Oxidation (M))|F}YQ 4.527 - 812 1 2.133 97564.6 0.5799999833106995 1927 3323 5245 DOHH2_400M_050219_1,5252 DOHH2_400M_050219_1,5252,EYRWECMKRYP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5253 28.238 800.0 181290.0 25 0 7884.0 + 38618 TTESQELSRY 10 177 607.2879431157527 1212.5613332983053 2 607.2874023318291 MULTI CID FTMS 0 0 0 5245 107177.0 1.0 0 0.0 8 Unmodified _TTESQELSRY_ ENSG00000151503|ENST00000534548|NCAPD3 87.25819977447905 0.0111194359805254 1 TTESQE{I|L}SRY 10 0 + 102.77 0.0 0.0 8.4755 8.4755 92.118 0.0 0.0 0.0 79.12585341864038 7.754537344402905 7.754537344402905 9.164539485499247 0 0.6307196863200843 1.5228787452803376 1.079689690656103 1.2302046884880935 + + TTESQE{I|L}SRY;TTES[AG]E{I|L}SRY;TTESQE{I|L}[TP]AH;TT{M(Oxidation (M))|F}YY{I|L}SRY;TTESQ[Y{I|L}]{M(Oxidation (M))|F}QP;TTESQ[Y{I|L}][QP]{M(Oxidation (M))|F};TTES[AG]E{I|L}[TP]AH;TTESQ[Y{I|L}]{M(Oxidation (M))|F}[AG]P;TTES[AG][Y{I|L}]{M(Oxidation (M))|F}QP;[QA][QP]{I|L}EQSE[PS] 8.4755;7.7197;6.9087;5.8482;5.553;5.3818;5.1413;4.7972;4.7972;4.717 +;-;-;-;-;-;-;-;-;- + 655 + 1 2.133 108991.4 0.5799999833106995 1928 3323 5245 DOHH2_400M_050219_1,5253 DOHH2_400M_050219_1,5253,TTESQELSRY True True TTESQELSRY 28.238037 607.2888 605105.5625 5245.0 ENSG00000151503|ENST00000534548|NCAPD3 7.048020680745442 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5254 28.251 746.0 212500.0 25 0 9607.6 + 20029 LINRINHFL 9 203 380.5606532494246 1138.6601303484738 3 380.5604431033134 MULTI CID FTMS 0 0 0 5245 97198.8828125 1.0 0 0.0 9 Unmodified _LINRINHFL_ REV__ENSG00000204478|ENST00000602960|PRAMEF20 14.40537977576856 0.4467465336100671 1 {I|L} 1 -1 17.012 0.0 0.0 1.494 0.0 0.0 1007.5650355992536 0.0 1007.5650355992536 0.0 0.4570785123231857 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.494 + + 105 + 1 2.133 125994.4 1.0 1929 3323 5245 DOHH2_400M_050219_1,5254 DOHH2_400M_050219_1,5254,LINRINHFL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5256 28.258 264.0 318130.0 25 0 22934.0 + + -1 HIKDSFHSL 9 120 361.8581120727115 1082.5525068183345 3 361.8564025759697 MULTI CID FTMS 0 0 0 5255 180588.0625 0.9843661582687148 -1 0.062936782836914 1 Carbamidomethyl (C) _LMTVFC(Carbamidomethyl (C))LSI_ ENST00000553951.1_1_14:65544523-65568380:-|nuORF;ENST00000556702.1_1_14:65560332-65569057:-|nuORF;nc|ENSG00000125952|P61244-2|MAX;ENSG00000125952|ENST00000358664|MAX;nc|ENSG00000125952|P61244-3|MAX;nc|ENSG00000125952|P61244-5|MAX;ENST00000557277.5_2_14:65544132-65569310:-|nuORF;nc|ENSG00000125952|P61244-6|MAX;nc|ENSG00000125952|P61244-4|MAX 15.248480904072842 0.4239247793462406 1 [{M(Oxidation (M))|F}V]V{I|L}[NS][YE]{I|L} 9 -1 + 30.14 0.0 0.0 2.7842 2.7842 74.683 0.0 0.0 0.0 0.2535602732106881 7.789230860337998 0.2535602732106881 6.706962271689751 0 0.0 0.8538719643217619 0.5 0.0 [{M(Oxidation (M))|F}V]V{I|L}[NS][YE]{I|L};[{M(Oxidation (M))|F}V]V[WK][YE]{I|L};[{M(Oxidation (M))|F}V]H[Y{I|L}][YE]{I|L};[{M(Oxidation (M))|F}V]V[KC][WK]{[CA]|SS};[{M(Oxidation (M))|F}V]V[KP]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L};[{M(Oxidation (M))|F}V]V[R{M(Oxidation (M))|F}]{[ES]|[DT]|[{I|L}C]}S{I|L};[{M(Oxidation (M))|F}V]V[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}{[CA]|SS};[{M(Oxidation (M))|F}V]H[HK]{[ES]|[DT]|[{I|L}C]}S{I|L};[{M(Oxidation (M))|F}V]H[HK]{[QN]|[E{I|L}]|[KN]}{[CA]|SS};{[MS]|[{M(Oxidation (M))|F}A]}H{I|L}[YN][YR] 2.7842;2.1646;1.7239;1.309;1.1772;1.1772;1.031;0.7365;0.59024;0.34535 -;-;-;-;-;-;-;-;-;- 159 + 1 2.133 75367.8 1.0 1930 3324 5255 DOHH2_400M_050219_1,5256 DOHH2_400M_050219_1,5256,LMTVFCLSI False False HIKDSFHSL 28.258346 361.85640257597 1062200.75 5255.0 ENST00000553951.1_1_14:65544523-65568380:-|nuORF;;ENST00000556702.1_1_14:65560332-65569057:-|nuORF;;nc|ENSG00000125952|P61244-2|MAX;;ENSG00000125952|ENST00000358664|MAX;;nc|ENSG00000125952|P61244-3|MAX;;nc|ENSG00000125952|P61244-5|MAX;;ENST00000557277.5_2_14:65544132-65569310:-|nuORF;;nc|ENSG00000125952|P61244-6|MAX;;nc|ENSG00000125952|P61244-4|MAX 1.3332723379135132 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5257 28.262 178.0 227120.0 25 0 18811.0 -1 0 76 556.2635283080406 555.2562518414405 1 556.2640869021416 MULTI CID FTMS 0 0 0 5255 181146.8125 0.2669993777213177 4 -0.1578922271728515 2 1 {I|L} 1 -1 11.109 0.0 0.0 2.0007 0.0 0.0 424.1614317504233 0.0 424.1614317504233 0.0 0.1401436180012183 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.0007 - 22 + 1 2.133 41552.4 1.0 1931 3324 5255 DOHH2_400M_050219_1,5257 DOHH2_400M_050219_1,5257, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5258 28.268 314.0 264370.0 25 0 37185.0 + 26339 NSEEMKEAYY 10 115 632.2633796704716 1262.5122064077432 2 632.2626830935478 MULTI CID FTMS 0 0 0 5255 242606.59375 0.3515428759077232 -3 0.195627212524414 3 Unmodified _NSEEMKEAYY_ ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF;ENST00000581339.1_1_18:21053400-21057068:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3 101.5434397834973 0.0080485045682421 1 [NS]EEMKEAYY 10 0 + 109.49 0.0 0.0 8.6721 8.6721 96.755 0.0 0.0 0.0 19.241955863562325 16.53212513775344 16.53212513775344 19.241955863562325 0 2.2302046884880937 1.3010299956639813 2.0626432252195626 1.319341519366547 + + [NS]EEMKEAYY;{[ES]|[DT]|[{I|L}C]}NEMKEAYY;[NS]EEM[{I|L}T]NYY;[NS]E[WR]MDYY;GGSEEMKEAYY;[NS]EEM[{I|L}T]GGYY;EESNMKEAYY;{[ES]|[DT]|[{I|L}C]}QDMKEAYY;{[ES]|[DT]|[{I|L}C]}GGEMKEAYY;{[ES]|[DT]|[{I|L}C]}ENMKEAYY 8.6721;7.148;7.1238;6.6782;6.441;6.3979;6.3964;6.1105;5.9034;5.8902 +;-;-;-;-;-;-;-;-;- + 4451 1 2.133 66792.3 1.0 1932 3324 5255 DOHH2_400M_050219_1,5258 DOHH2_400M_050219_1,5258,NSEEMKEAYY True True NSEEMKEAYY 28.267556 632.262683093548 3122684.5 5255.0 nc|ENSG00000101782|O14730-2|RIOK3;;ENST00000581339.1_1_18:21053400-21057068:+|nuORF;;ENSG00000101782|ENST00000339486|RIOK3;;ENST00000581302.5_1_18:21033283-21057068:+|nuORF 7.986671447753906 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5259 28.271 155.0 511130.0 25 0 48005.0 + -1 DPNFKNRL 8 94 502.2676353211039 501.2603588545039 1 502.2693359255791 MULTI CID FTMS 0 0 0 5255 165641.84375 0.3335301590405829 -3 0.195627212524414 4 ENSG00000173726|ENST00000366607|TOMM20 1 [DP]N 3 -1 23.913 0.0 0.0 4.7706 0.0 0.0 0.0 172.1147649426476 172.1147649426476 13.732126592698322 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2742275032520141 0.0 [DP]N 4.7706 - 14 1 2.133 67831.1 1.0 1933 3324 5255 DOHH2_400M_050219_1,5259 DOHH2_400M_050219_1,5259, False False DPNFKNRL 28.270618 502.269335925579 6937679.5 5255.0 ENSG00000173726|ENST00000366607|TOMM20 7.760379473368327 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5260 28.279 471.0 226830.0 25 0 13623.0 40265 VGTLPSGK 8 150 379.7243884537999 757.4342239743999 2 379.7235595583916 MULTI CID FTMS 0 0 0 5255 136746.75 0.6509705545602085 -2 0.1189994812011718 5 Unmodified _VGTLPSGK_ ENST00000280571.9_1_12:123920839-123921196:-|nuORF 19.438996006549623 0.6237395211498085 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KP]EK 6 5 + 26.201 0.0 0.0 3.4592 3.4592 75.922 0.0 0.0 0.0 0.8340158675373672 5.231753388548192 0.8340158675373672 6.505149978319906 0 0.3494850021680094 0.0 0.4247425010840047 0.1803115997617927 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KP]EK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KP]TR;[KP][KT]ER 3.4592;2.6003;0.57444 -;-;- 101 1 2.133 84432.8 1.0 1934 3324 5255 DOHH2_400M_050219_1,5260 DOHH2_400M_050219_1,5260,VGTLPSGK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5261 28.285 318.0 306840.0 25 0 31005.0 + 655 AELTGDHQL 9 125 492.2432101586436 982.4718673840872 2 492.2433959841728 MULTI CID FTMS 0 0 0 5255 248935.21875 0.7908068408297532 -1 0.062936782836914 6 Unmodified _AELTGDHQL_ ENSG00000144028|ENST00000323853|SNRNP200 57.72198328787511 0.0273433238377839 1 {[CP]|[EA]}{I|L}TGDHQ{I|L} 9 0 + 56.315 0.0 0.0 5.732 5.732 89.104 0.0 0.0 0.0 35.02996618580511 11.331305630950723 11.331305630950723 12.703037561203844 0 1.25 0.0 1.1549471895720984 0.3494850021680094 + + {[CP]|[EA]}{I|L}TGDHQ{I|L};{[CP]|[EA]}{I|L}TGDH[AG]{I|L};{[CP]|[EA]}{I|L}E[SG]HQ{I|L};{[CP]|[EA]}{I|L}TW[HN]{I|L};{[CP]|[EA]}{I|L}TGE[HN]{I|L};{[CP]|[EA]}{I|L}E[SG]H[AG]{I|L};{[CP]|[EA]}{I|L}E{[SA]|[TG]}[HN]{I|L};{[QN]|[E{I|L}]|[KN]}YY[VP]{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}[KC][YK]{[CP]|[EA]};[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[YK]{[CP]|[EA]} 5.732;4.439;4.0547;3.7231;3.5949;2.4508;1.9176;1.8301;0.65191;0.58506 +;-;-;-;-;-;-;-;-;- + 283 + 1 2.133 78062.0 1.0 1935 3324 5255 DOHH2_400M_050219_1,5261 DOHH2_400M_050219_1,5261,AELTGDHQL True True AELTGDHQL 28.284725 492.243395984173 1619230.75 5255.0 ENSG00000144028|ENST00000323853|SNRNP200 7.084964275360107 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5262 28.289 254.0 350400.0 25 0 113390.0 -1 0 90 418.22748847125774 417.22021200465775 1 420.2393066287041 MULTI CID FTMS 0 0 0 5255 274197.90625 0.9859697359007128 2 -0.0733013153076171 7 1 {I|L} 1 -1 12.764 0.0 0.0 3.0593 0.0 0.0 286.1251630318046 0.0 286.1251630318046 0.0 1.7951097132083405 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.0593 - 7 + 1 2.133 75664.2 1.0 1936 3324 5255 DOHH2_400M_050219_1,5262 DOHH2_400M_050219_1,5262, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5263 28.295 282.0 352970.0 25 0 122260.0 -1 0 86 478.2468906921434 477.2396142255434 1 478.2465698122978 MULTI CID FTMS 0 0 0 5255 165744.109375 0.7474546496002125 -2 0.1189994812011718 8 1 E 1 -1 16.067 0.0 0.0 3.3666 0.0 0.0 330.1862980407762 0.0 330.1862980407762 0.0 5.097560269754268 0.0 0.0 0 0.0 0.0 0.1462566630072955 0.0 E 3.3666 - 23 + 1 2.133 82040.7 1.0 1937 3324 5255 DOHH2_400M_050219_1,5263 DOHH2_400M_050219_1,5263, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5264 28.308 800.0 232500.0 25 0 16237.0 + 7322 EEYEARENF 9 183 593.7539908878991 0 593.7538940310478 PEAK CID FTMS 0 0 0 5255 134493.234375 0.7571338473798931 -2 0.1189994812011718 9 Unmodified _EEYEARENF_ ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 71.92227651296345 0.0171259190214613 1 YE{M(Oxidation (M))|F}[VP]Q 6 7 24.962 0.0 0.0 2.1056 0.0 0.0 258.0847843539754 161.02475916080314 419.1095435147786 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.3807196863200844 1.524227503252014 YE{M(Oxidation (M))|F}[VP]Q 2.1056 - 455 + 1 2.133 139086.5 0.6499999761581421 1938 3324 5255 DOHH2_400M_050219_1,5264 DOHH2_400M_050219_1,5264,EEYEARENF True True EEYEARENF 28.308449 593.753894031048 962422.9375 5255.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B 7.617620786031087 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5266 28.313 37.0 1505000.0 25 0 144230.0 + 568 AETDERRLL 9 64 368.2000508277754 1101.5783230835264 3 368.1998779177666 MULTI CID FTMS 0 0 0 5265 1038314.8125 0.3230599914436838 2 -0.0629291534423828 1 Unmodified _AEILYYFAL_ ENST00000337288.9_2_2:96874284-96874539:-|nuORF 30.22481116460888 0.1466181017706357 1 AE{I|L}C{I|L} 5 5 66.454 0.0 0.0 6.0326 0.0 0.0 0.0 569.3166793454828 569.3166793454828 54.85985638199878 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 AE{I|L}C{I|L} 6.0326 - 72 + 1 2.133 49989.5 1.0 1939 3325 5265 DOHH2_400M_050219_1,5266 DOHH2_400M_050219_1,5266,AEILYYFAL False False AETDERRLL 28.313239 368.199877917767 35521016.0 5265.0 ENST00000337288.9_2_2:96874284-96874539:-|nuORF 6.267396767934163 3.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 5267 28.324 628.0 167780.0 25 0 14365.0 + -1 AEAEAVREVY 10 154 569.2622291154292 1136.5099052976584 2 569.2622558474541 MULTI CID FTMS 0 0 0 5265 20824.037109375 0.0516246629405943 4 -0.1375160217285156 2 Oxidation (M) _QDLTRTQM(Oxidation (M))E_ nc|ENSG00000101343|Q9BZJ0|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;ENSG00000101343|ENST00000536226|CRNKL1 24.020572477871973 0.2255576514309169 1 DE{M(Oxidation (M))|F} 3 -1 16.642 0.0 0.0 1.4643 0.0 0.0 727.4014759748062 0.0 727.4014759748062 0.0 2.0376329423702657 0.0 0.0 0 0.5317183090963749 0.0 0.3252574989159953 0.0 DE{M(Oxidation (M))|F} 1.4643 - 656 1 2.133 85493.8 1.0 1940 3325 5265 DOHH2_400M_050219_1,5267 DOHH2_400M_050219_1,5267,QDLTRTQME False False AEAEAVREVY 28.324212 569.262255847454 2838507.75 5265.0 nc|ENSG00000101343|Q9BZJ0|CRNKL1;;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;;ENSG00000101343|ENST00000536226|CRNKL1 5.544185161590576 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5269 28.329 49.0 1365300.0 25 0 104930.0 + 6778 EEAEIIRKY 9 90 384.20841859597897 1149.603426388137 3 384.2082702517509 MULTI CID FTMS 0 0 0 5268 719559.0625 0.1893646495350683 3 -0.121734619140625 1 Unmodified _EEAEIIRKY_ ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;ENST00000490921.5_1_1:226549163-226553858:-|nuORF 17.11289562659939 0.3734572693229295 1 EEAE{I|L}{I|L}RKY 9 0 + 40.169 0.0 0.0 3.4942 3.4942 84.245 0.0 0.0 0.0 28.38669932286068 9.463728584247626 9.463728584247626 40.16943594042974 0 0.0 0.0 0.5 0.0 + + EEAE{I|L}{I|L}RKY 3.4942 + + 90 + 1 2.133 57131.5 1.0 1941 3326 5268 DOHH2_400M_050219_1,5269 DOHH2_400M_050219_1,5269,EEAEIIRKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5270 28.332 165.0 530360.0 25 0 132480.0 + 822 AETDERRLL 9 73 551.7963373192167 1101.5781217052331 2 551.7963134646416 MULTI CID FTMS 0 0 0 5268 393220.625 0.2392584806012362 3 -0.121734619140625 2 Unmodified _AETDERRLL_ ENST00000337288.9_2_2:96874284-96874539:-|nuORF 19.256988751693697 0.3154191944385105 1 [TA][RN]{I|L}{I|L}DHY 9 7 [TA][RN]{I|L}{I|L}DH + + 13.099 0.99153 0.10772 1.1891 1.1891 48.398 0.0 0.0 0.0 0.0 -6.82258126592544 -6.82258126592544 0.0 0 0.0 0.0 0.0 0.0 [TA][RN]{I|L}{I|L}DHY 1.1891 - 39 + 1 2.133 71076.9 1.0 1942 3326 5268 DOHH2_400M_050219_1,5270 DOHH2_400M_050219_1,5270,AETDERRLL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5271 28.335 160.0 385900.0 25 0 35805.0 + 5585 DMYNRMTSA 9 93 544.7281407537656 1087.4417285743311 2 544.7289916872978 MULTI CID FTMS 0 0 0 5268 312093.125 0.5263166770574059 -2 0.0733013153076171 3 Unmodified _DMYNRMTSA_ ENSG00000134809|ENST00000257245|TIMM10 23.78978130925829 0.2284941198415988 1 [MD]YR 4 5 36.95 0.0 0.0 3.3979 0.0 0.0 0.0 519.1971529596311 519.1971529596311 15.981362441963327 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [MD]YR 3.3979 - 53 + 1 2.133 52790.3 1.0 1943 3326 5268 DOHH2_400M_050219_1,5271 DOHH2_400M_050219_1,5271,DMYNRMTSA False True DMYNRMTSA 28.33543 544.728991687298 2458040.25 5268.0 ENSG00000134809|ENST00000257245|TIMM10 7.53223196665446 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5272 28.339 172.0 351890.0 25 0 38358.0 + 2129 APVPAPERK 9 80 482.7824454486659 963.5503379641318 2 482.7823058962822 MULTI CID FTMS 0 0 0 5268 300933.28125 0.4215680660733812 6 -0.2583446502685547 4 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 15.847184025352805 0.4077185912009129 1 [PA]APVC(Carbamidomethyl (C)) 6 -1 53.02 0.0 0.0 5.5026 0.0 0.0 0.0 365.25617395572505 365.25617395572505 30.08864383480216 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 [PA]APVC(Carbamidomethyl (C)) 5.5026 - 77 + 1 2.133 53819.6 1.0 1944 3326 5268 DOHH2_400M_050219_1,5272 DOHH2_400M_050219_1,5272,APVPAPERK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5273 28.342 172.0 405980.0 25 0 29219.0 + + 5558 DMQRKVEL 8 107 509.27393944191743 1016.5333259506348 2 509.7727233767509 MULTI CID FTMS 0 0 0 5268 288102.3125 1.0 0 0.0 5 Unmodified _DMLRLEQL_ ENSG00000198865|ENST00000361970|CCDC152 23.1484247019978 0.5573009939494978 1 [HV]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KV[Q{I|L}] 8 -1 + 30.34 0.0 0.0 2.9846 2.9846 80.201 0.0 0.0 0.0 12.619478172486469 0.6694678963061307 0.6694678963061307 12.673180294711749 0 0.3807196863200844 1.3979400086720375 0.0 0.2887254899964357 [HV]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KV[Q{I|L}];[HV][PS][HT]V[Q{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}{[WT]|[RM]}KV[Q{I|L}];{[ET]|[MV]}[KA][QT]V[Q{I|L}];[HV][PS][YR]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ET]|[MV]}[KA][KC]P[Q{I|L}];[VP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[DS]|[MA]|[CV]|TT}V[Q{I|L}] 2.9846;1.7379;1.1558;1.0548;0.38666;0.36721;0.16141 -;-;-;-;-;-;- 196 1 2.133 61972.3 1.0 1945 3326 5268 DOHH2_400M_050219_1,5273 DOHH2_400M_050219_1,5273,DMLRLEQL False False DMQRKVEL 28.342122 509.772723376751 1062051.5 5268.0 ENSG00000198865|ENST00000361970|CCDC152 5.159478505452474 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5274 28.345 142.0 362270.0 25 0 26708.0 + 8367 ESDINSVRY 9 90 541.759358894448 0 541.7591430544853 PEAK CID FTMS 0 0 0 5268 274350.625 0.2336919376997538 3 -0.121734619140625 6 Unmodified _ESDINSVRY_ ENSG00000069966|ENST00000261837|GNB5;ENST00000559541.1_1_15:52416976-52428016:-|nuORF;nc|ENSG00000069966|O14775-2|GNB5;nc|ENSG00000069966|O14775-3|GNB5 60.07390631473393 0.0167981024283326 1 D{I|L}NSVHD 7 4 44.952 0.0 0.0 4.1564 0.0 0.0 216.07206545953903 82.06685815982655 298.1389236193656 0.0 0.0 0.0 0.0 0 0.6203715150305281 0.0 0.3054621874040891 0.4247425010840047 D{I|L}NSVHD 4.1564 - 186 + 1 2.133 42989.9 1.0 1946 3326 5268 DOHH2_400M_050219_1,5274 DOHH2_400M_050219_1,5274,ESDINSVRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5275 28.349 207.0 287620.0 25 0 18281.0 14114 IATSFRDTSL 10 96 555.792995973433 0 555.7928344607353 PEAK CID FTMS 0 0 0 5268 135887.4375 1.0 0 0.0 7 Unmodified _IATSFRDTSL_ ENSG00000204764|ENST00000523189|RANBP17;ENST00000443155.5_1_5:170288887-170338173:+|nuORF;ENST00000519130.5_1_5:170289037-170336799:+|nuORF;nc|ENSG00000204764|Q9H2T7-2|RANBP17 19.361941925380144 0.3034098862319568 1 VVP[SG]P 6 9 15.406 0.0 0.0 1.3885 0.0 0.0 115.02262899680927 455.2499178522094 570.2725468490187 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VVP[SG]P 1.3885 - 99 + 1 2.133 51493.9 1.0 1947 3326 5268 DOHH2_400M_050219_1,5275 DOHH2_400M_050219_1,5275,IATSFRDTSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5276 28.363 800.0 188530.0 25 0 26267.0 + 30543 REMDELRSY 9 124 599.7796691310112 1197.5447853288224 2 599.7797119021416 MULTI CID FTMS 0 0 0 5268 121239.0546875 0.8572468424284461 -1 0.0157814025878906 8 Unmodified _REMDELRSY_ ENSG00000147419|ENST00000356537|CCDC25;ENST00000521220.1_1_8:27593735-27605871:-|nuORF;nc|ENSG00000147419|Q86WR0-2|CCDC25 29.43715596616401 0.1566398223704148 1 [VG]E[MD]E[R{I|L}]SY 10 2 + 36.677 0.0 0.0 3.0626 3.0626 82.952 0.0 0.0 0.0 0.3665453570295796 5.734418423519337 0.3665453570295796 34.16759976983081 0 1.9386218330464624 1.0969100130080565 0.0 0.0 [VG]E[MD]E[R{I|L}]SY;{[RE]|[WV]}[WK][WY]{[QC]|[C(Carbamidomethyl (C))A]} 3.0626;0.20951 -;- 179 + 1 2.133 111129.9 0.6100000143051147 1948 3326 5268 DOHH2_400M_050219_1,5276 DOHH2_400M_050219_1,5276,REMDELRSY False True REMDELRSY 28.362768 599.779711902142 826610.3125 5268.0 nc|ENSG00000147419|Q86WR0-2|CCDC25;;ENST00000521220.1_1_8:27593735-27605871:-|nuORF;;ENSG00000147419|ENST00000356537|CCDC25 4.714698235193889 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5277 28.371 487.0 253520.0 25 0 19328.0 + 319 AEAEAVREVY 10 122 568.7821941436783 1135.5498353541566 2 568.7822753787041 MULTI CID FTMS 0 0 0 5268 110703.9375 0.42108877960274 -1 0.0157814025878906 9 Unmodified _AEAEAVREVY_ ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 59.05245873256422 0.0390717477387156 1 {[CP]|[EA]}AEAVRD{I|L}Y 10 2 + 67.602 0.0 0.0 5.9533 5.9533 90.208 0.0 0.0 0.0 7.269987279362624 13.349621957594096 7.269987279362624 13.349621957594096 0 1.7614393726401687 0.0 0.7134679910804405 0.0 {[CP]|[EA]}AEAVRD{I|L}Y;{[CP]|[EA]}AEAVRDY{I|L};{[CP]|[EA]}AEA{I|L}AAEVY;{[CP]|[EA]}AEA{I|L}AV{[CP]|[EA]}Y;{[CP]|[EA]}AE[RV]AEVY;{[CP]|[EA]}AE[RV]V{[CP]|[EA]}Y;{[CP]|[EA]}AEAKKD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[CP]|[EA]}AEAKQQVY;{[CP]|[EA]}AEA{I|L}A[W{I|L}]Y;{[CP]|[EA]}A[W{I|L}]RD{I|L}Y 5.9533;4.7777;4.0268;3.9893;3.9416;3.904;3.8028;3.6753;3.6753;3.6566 -;-;-;-;-;-;-;-;-;- 1301 + 1 2.133 96515.0 1.0 1949 3326 5268 DOHH2_400M_050219_1,5277 DOHH2_400M_050219_1,5277,AEAEAVREVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5279 28.38 266.0 286300.0 25 0 37735.0 + 674 AEMNRGSNEW 10 90 597.2531674541538 1192.4917819751074 2 597.2534667849541 MULTI CID FTMS 0 0 0 5278 255068.734375 0.3755255135330805 3 -0.1125507354736328 1 Unmodified _AEMNRGSNEW_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENST00000568339.5_1_16:85839106-85839475:+|nuORF 45.739877483867886 0.1051543674217965 1 Q[WR]MAEW 7 7 46.771 0.0 0.0 3.9221 0.0 0.0 187.0635090558609 0.0 187.0635090558609 0.0 34.00641934357392 0.0 0.0 0 0.4247425010840047 0.0 0.0 1.079689690656103 Q[WR]MAEW 3.9221 - 153 1 2.133 62393.8 1.0 1950 3327 5278 DOHH2_400M_050219_1,5279 DOHH2_400M_050219_1,5279,AEMNRGSNEW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5280 28.394 800.0 67146.0 25 0 3521.2 + + 296 FEMEQNLRQGVDA 13 94 776.8572134602441 1551.699873987288 2 776.8595458865166 MULTI CID FTMS 0 0 0 5278 73965.125 0.8059889240048341 -5 0.2394485473632812 2 Unmodified _ADRYTWDRWHF_ ENSG00000171403|ENST00000246662|KRT9;P35527 6.1918466704503565 0.8459343993818249 1 {I|L}NQE{M(Oxidation (M))|F}EE 7 -1 58.148 0.0 0.0 3.7474 0.0 0.0 644.324421708267 0.0 644.324421708267 0.0 43.72318517861992 0.0 0.0 0 1.5356668758921828 0.0 0.3807196863200844 0.4247425010840047 {I|L}NQE{M(Oxidation (M))|F}EE 3.7474 - 260 1 2.133 45437.3 0.5099999904632568 1951 3327 5278 DOHH2_400M_050219_1,5280 DOHH2_400M_050219_1,5280,ADRYTWDRWHF False False FEMEQNLRQGVDA 28.393543 776.859545886517 1196561.5 5278.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 8.614057699839273 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5281 28.396 147.0 262630.0 25 0 23267.0 -1 AEVCVPVTL 9 78 494.264318203653 986.514083474106 2 494.2639953494072 MULTI CID FTMS 0 0 0 5278 183392.46875 0.8792569218780925 -2 0.0629291534423828 3 Carbamidomethyl (C) _AEVC(Carbamidomethyl (C))VPVTL_ ENSG00000177888|ENST00000367405|ZBTB41;ENST00000467322.1_1_1:197128491-197145097:-|nuORF 21.74664581756881 0.2544899275067181 1 VGDT{I|L} 5 -1 42.435 0.0 0.0 4.3015 0.0 0.0 483.25474745918126 0.0 483.25474745918126 0.0 38.4556125503638 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 VGDT{I|L} 4.3015 - 140 1 2.133 35220.0 1.0 1952 3327 5278 DOHH2_400M_050219_1,5281 DOHH2_400M_050219_1,5281,AEVCVPVTL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5282 28.402 303.0 246970.0 25 0 16159.0 + 11554 GITSTSLIK 9 110 460.2747834412929 918.535013949386 2 460.2755004763603 MULTI CID FTMS 0 0 0 5278 165272.875 0.4767225211741687 3 -0.1125507354736328 4 Unmodified _GITSTSLIK_ REV__nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2;REV__nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2 8.593279151180031 0.6146971463335029 1 SY 2 -1 16.454 0.0 0.0 1.7913 0.0 0.0 650.429527964814 0.0 650.429527964814 0.0 5.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 1.7913 - 36 + 1 2.133 64497.0 1.0 1953 3327 5278 DOHH2_400M_050219_1,5282 DOHH2_400M_050219_1,5282,GITSTSLIK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5283 28.409 380.0 286940.0 25 0 14348.0 + 11208 GENTGIVKKF 10 155 364.8732405002637 1091.5978921009912 3 365.2070800662041 MULTI CID FTMS 0 0 0 5278 145441.484375 0.9787384671743602 -1 0.0471477508544921 5 Unmodified _GENTGIVKKF_ ENSG00000091490|ENST00000399878|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;nc|ENSG00000091490|Q68CR1-3|SEL1L3 10.315234532428624 0.6744623947628824 1 {I|L}K[KC]VKK{M(Oxidation (M))|F} 8 6 19.819 0.0 0.0 1.8156 0.0 0.0 98.97951042718452 0.0 98.97951042718452 0.0 8.39854220914328 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}K[KC]VKK{M(Oxidation (M))|F} 1.8156 - 207 + 1 2.133 95500.8 1.0 1954 3327 5278 DOHH2_400M_050219_1,5283 DOHH2_400M_050219_1,5283,GENTGIVKKF False True GENTGIVKKF 28.408822 365.207080066204 634626.625 5278.0 ENSG00000091490|ENST00000399878|SEL1L3;;nc|ENSG00000091490|Q68CR1-2|SEL1L3;;nc|ENSG00000091490|Q68CR1-3|SEL1L3 4.804625272750855 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5285 28.416 237.0 384900.0 25 0 144010.0 -1 0 92 541.2437613728516 540.2364849062516 1 541.2449828982353 MULTI CID FTMS 0 0 0 5284 189170.3125 0.7999627865893493 -1 0.0374431610107421 1 1 [{I|L}T]H 3 -1 13.134 0.0 0.0 2.4311 0.0 0.0 0.0 186.02497302564527 186.02497302564527 0.3694274640881634 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 [{I|L}T]H 2.4311 - 34 1 2.133 74345.5 1.0 1955 3328 5284 DOHH2_400M_050219_1,5285 DOHH2_400M_050219_1,5285, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5286 28.43 800.0 130280.0 25 0 8906.8 + -1 EEIMKEGKQF 10 143 619.3170250933725 618.3097486267725 1 619.3173095583916 MULTI CID FTMS 0 0 0 5284 101897.65625 0.2870459355365989 -39 1.9067115783691408 2 ENSG00000213965|ENST00000397061|NUDT19 1 EE{I|L} 3 -1 25.986 0.0 0.0 4.2028 0.0 0.0 0.0 244.11679143366624 244.11679143366624 15.825718757654768 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.0 EE{I|L} 4.2028 - 97 1 2.133 81402.2 0.5400000214576721 1956 3328 5284 DOHH2_400M_050219_1,5286 DOHH2_400M_050219_1,5286, False False EEIMKEGKQF 28.429653 619.317309558392 710707.6875 5284.0 ENSG00000213965|ENST00000397061|NUDT19 1.403196891148885 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5287 28.433 143.0 362410.0 25 0 39887.0 9150 FFVVFLTL 8 98 493.2934114751427 984.5722700170854 2 493.2932311892509 MULTI CID FTMS 0 0 0 5284 198819.828125 0.7607384127829475 -1 0.0374431610107421 3 Unmodified _FFVVFLTL_ nc|ENSG00000196266|Q5JRS4|OR10J3 26.34127834903884 0.4900704351052977 1 [{I|L}V]RNVGNT{I|L} 9 6 + 57.499 0.0 0.0 5.84 5.84 83.989 0.0 0.0 0.0 17.818075850303252 32.57331599541425 17.818075850303252 6.478174818886373 0 1.305462187404089 1.6989700043360187 0.0 0.0 [{I|L}V]RNVGNT{I|L};[{I|L}V]RNRNT{I|L};[{I|L}V]RNVGGGT{I|L};[{I|L}V]RGGVGNT{I|L};[{I|L}V]RNRGGT{I|L};[{I|L}V]RGGRNT{I|L};[{I|L}V]RGGVGGGT{I|L};[{I|L}V]RW[TP]T{I|L};[{I|L}V]RGGRGGT{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}[RP]G{I|L}T{I|L} 5.84;5.182;4.9047;4.9047;4.2413;4.2413;3.9739;3.7906;3.306;2.9551 -;-;-;-;-;-;-;-;-;- 320 1 2.133 40996.7 1.0 1957 3328 5284 DOHH2_400M_050219_1,5287 DOHH2_400M_050219_1,5287,FFVVFLTL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 5288 28.435 131.0 397320.0 25 0 63857.0 325 AEAELDLGPF 10 87 531.2637226892919 0 531.2617065310478 PEAK CID FTMS 0 0 0 5284 269754.75 1.0 0 0.0 4 Unmodified _AEAELDLGPF_ ENSG00000063169|ENST00000594866|BICRA 17.11289562659939 0.3208555510962471 1 AEE 3 7 16.198 0.0 0.0 1.5274 0.0 0.0 200.09710173459456 528.2611788385374 728.3582805731319 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AEE 1.5274 - 44 + 1 2.133 45868.7 1.0 1958 3328 5284 DOHH2_400M_050219_1,5288 DOHH2_400M_050219_1,5288,AEAELDLGPF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5289 28.441 299.0 304720.0 25 0 18873.0 26631 NVVYITLRSK 10 118 398.23988775829866 0 398.2400390505791 PEAK CID FTMS 0 0 0 5284 123134.359375 0.8947098510739222 1 -0.0371437072753906 5 Unmodified _NVVYITLRSK_ ENSG00000164125|ENST00000585682|GASK1B;nc|ENSG00000164125|Q6UWH4-2|GASK1B;nc|ENSG00000164125|Q6UWH4-3|GASK1B 6.723162845929126 0.3961065659209837 1 N 1 9 6.8667 0.0 0.0 0.86431 0.0 0.0 496.2998005247467 181.0983370416625 677.3981375664092 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 + N 0.86431 + + 30 + 1 2.133 75863.8 1.0 1959 3328 5284 DOHH2_400M_050219_1,5289 DOHH2_400M_050219_1,5289,NVVYITLRSK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5290 28.446 289.0 225720.0 25 0 16300.0 27363 PHYVSGLF 8 104 460.23779975470495 0 460.2386962771416 PEAK CID FTMS 0 0 0 5284 108874.5 0.6549921241723378 3 -0.1195182800292968 6 Unmodified _PHYVSGLF_ ENSG00000136478|ENST00000584379|TEX2;nc|ENSG00000136478|Q8IWB9-2|TEX2 6.354104778181461 0.5763711549229614 1 {M(Oxidation (M))|F} 1 7 3.9794 0.0 0.0 0.43327 0.0 0.0 529.2922060994506 239.1036318414672 768.3958379409178 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.43327 + + 9 + 1 2.133 56294.9 1.0 1960 3328 5284 DOHH2_400M_050219_1,5290 DOHH2_400M_050219_1,5290,PHYVSGLF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5292 28.464 800.0 169960.0 25 0 6656.3 + 6722 EDKRQDMANAF 11 128 662.7995525009707 1323.5845520687412 2 662.8001586794853 MULTI CID FTMS 0 0 0 5291 179270.421875 0.3516607549313484 3 -0.1366100311279297 1 Unmodified _EDKRQDMANAF_ ENSG00000062598|ENST00000290246|ELMO2;ENST00000480042.5_1_20:45008831-45014791:-|nuORF;nc|ENSG00000062598|Q96JJ3-3|ELMO2 20.41453444215458 0.6105011870913812 1 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F} 13 9 + 120.81 0.0 0.0 9.1278 9.1278 92.378 0.0 0.0 0.0 13.15057483601862 16.642078980768076 13.15057483601862 9.07245946763102 0 0.7742275032520141 1.2218487496163564 0.6549471895720984 2.353917193908117 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG][AG]NA{M(Oxidation (M))|F} 9.1278;8.4423;8.4423;8.4423;8.3619;8.2941;8.1342;7.884;7.7585;7.7585 -;-;-;-;-;-;-;-;-;- 7771 1 2.153 100326.7 0.9800000190734864 1961 3329 5291 DOHH2_400M_050219_1,5292 DOHH2_400M_050219_1,5292,EDKRQDMANAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5293 28.467 151.0 444880.0 25 0 91925.0 + 7028 EELDPESREY 10 62 633.7780494847897 1265.5415460363793 2 633.7785522341728 MULTI CID FTMS 0 0 0 5291 362200.1875 0.521511060236692 -2 0.0745868682861328 2 Unmodified _EELDPESREY_ ENSG00000183617|ENST00000330133|MRPL54 43.9818466556824 0.1155196613165264 1 EE{I|L}DPES{[RE]|[WV]}Y 10 0 + 64.346 0.0 0.0 5.0845 5.0845 83.767 0.0 0.0 0.0 46.77175534610295 2.887955392469692 2.887955392469692 9.164539485499256 0 0.8494850021680094 1.6989700043360187 0.4247425010840047 0.0 + + EE{I|L}DPES{[RE]|[WV]}Y;EE{I|L}DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[PG]Y;EE{I|L}DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DAA{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[HT]SEPD{I|L}[HC];EE{I|L}DPES[HV][DP];{NN|[MP]|[D{I|L}]|[EV]}P[SG][Y{M(Oxidation (M))|F}]D{I|L}[HC];{[ET]|[MV]}[HT][DV]PD{I|L}[HC];[DP]QQ[DV]PD{I|L}[HC];[DP]{I|L}[SG][Y{M(Oxidation (M))|F}]D{I|L}[HC];[DP]TR[Y{M(Oxidation (M))|F}]D{I|L}[HC] 5.0845;4.3603;3.9648;3.9144;3.6519;2.8077;2.646;2.3315;2.2307;2.2029 +;-;-;-;-;-;-;-;-;- + 297 + 1 2.153 58125.6 1.0 1962 3329 5291 DOHH2_400M_050219_1,5293 DOHH2_400M_050219_1,5293,EELDPESREY True True EELDPESREY 28.466688 633.778552234173 7526928.5 5291.0 ENSG00000183617|ENST00000330133|MRPL54 8.600383758544922 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5294 28.469 109.0 738900.0 25 0 82833.0 + 32985 SENDTYFKKY 10 85 432.2034441376297 1293.5885030130892 3 432.2031738162041 MULTI CID FTMS 0 0 0 5291 302122.375 0.2670420313667179 -4 0.1375160217285156 3 Unmodified _SENDTYFKKY_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 28.49450938151212 0.328477364964909 1 TY{M(Oxidation (M))|F}KKY 6 4 25.706 0.0 0.0 1.9872 0.0 0.0 445.1449116795937 0.0 445.1449116795937 0.0 16.172815781993293 0.0 0.0 0 0.0 0.0 0.0 0.0 + TY{M(Oxidation (M))|F}KKY 1.9872 + + 94 + 1 2.153 71351.1 1.0 1963 3329 5291 DOHH2_400M_050219_1,5294 DOHH2_400M_050219_1,5294,SENDTYFKKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5295 28.473 210.0 429520.0 25 0 30112.0 40444 VILANHAIKL 10 111 364.5698090487922 1090.6875977465766 3 364.5693847537041 MULTI CID FTMS 0 0 0 5291 197187.34375 0.9046759669628132 -1 0.0371437072753906 4 Unmodified _VILANHAIKL_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4 39.957323273325 0.1580177220464651 1 V{I|L}K{[ET]|[MV]}VKK{M(Oxidation (M))|F} 9 7 + 72.126 0.0 0.0 6.6129 6.6129 88.326 0.0 0.0 0.0 59.90723858373141 10.968878562567532 10.968878562567532 9.018637558036673 0 0.2396518287104437 2.0 0.3054621874040891 0.8494850021680094 V{I|L}K{[ET]|[MV]}VKK{M(Oxidation (M))|F};{I|L}VK{[ET]|[MV]}VKK{M(Oxidation (M))|F};V{I|L}{[MG]|[TS]}[R{I|L}]KK{M(Oxidation (M))|F};{I|L}V{[MG]|[TS]}[R{I|L}]KK{M(Oxidation (M))|F} 6.6129;5.786;4.8896;4.0628 -;-;-;- 236 + 1 2.153 79926.0 1.0 1964 3329 5291 DOHH2_400M_050219_1,5295 DOHH2_400M_050219_1,5295,VILANHAIKL False True VLKSRFTKL 28.472974 364.569384753704 1157216.375 5291.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 1.9115494439999263 3.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5296 28.476 145.0 373980.0 25 0 30743.0 + 10410 FTAERSSYY 9 89 562.255463897813 1122.496374862426 2 562.2550536990166 MULTI CID FTMS 0 0 0 5291 191213.515625 1.0 0 0.0 5 Unmodified _FTAERSSYY_ ENSG00000197157|ENST00000354725|SND1 34.93206674587334 0.1032771302489716 1 {M(Oxidation (M))|F}TA[Q{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}YY 9 3 + 42.898 0.0 0.0 3.8216 3.8216 84.039 0.0 0.0 0.0 16.444021793654855 9.72234667441434 9.72234667441434 21.01342204748164 0 1.305462187404089 0.0 0.0 0.0 {M(Oxidation (M))|F}TA[Q{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}YY;[{M(Oxidation (M))|F}T][W{I|L}]{[QC]|[C(Carbamidomethyl (C))A]}YY;{[ET]|[MV]}[YE][KQ]YY;[{M(Oxidation (M))|F}T][W{I|L}][C(Carbamidomethyl (C))S]{M(Oxidation (M))|F}Y;[{I|L}T][W{M(Oxidation (M))|F}]{[QC]|[C(Carbamidomethyl (C))A]}YY 3.8216;1.9496;1.1223;1.0791;0.81598 -;-;-;-;- 78 + 1 2.153 46442.3 1.0 1965 3329 5291 DOHH2_400M_050219_1,5296 DOHH2_400M_050219_1,5296,FTAERSSYY True True FTAERSSYY 28.475892 562.255053699017 1079282.75 5291.0 ENSG00000197157|ENST00000354725|SND1 7.123704115549724 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5297 28.484 453.0 231830.0 25 0 19285.0 + + 40867 VPDERRYSL 9 103 378.8683334570272 1133.5831709712816 3 378.8679077029228 MULTI CID FTMS 0 0 0 5291 128593.4453125 1.0 0 0.0 6 Unmodified _VLPWYTNNK_ ENSG00000134109|ENST00000256497|EDEM1 14.40537977576856 0.4467465336100671 1 VPD{I|L}[WY][DV]K 9 -1 + 35.074 0.0 0.0 3.094 3.094 79.567 0.0 0.0 0.0 18.351901017451794 0.8636500280144332 0.8636500280144332 9.5092111287688 0 0.3012038525793939 0.0 0.0 0.6989700043360187 VPD{I|L}[WY][DV]K;VPD{I|L}[WY][QT]{I|L};VPDE[K{I|L}]{[{M(Oxidation (M))|F}C]|[YS]}A{I|L};VPD{I|L}[WY]{[SA]|[TG]}A{I|L};VPD{I|L}[WY]AAS{I|L} 3.094;2.2552;1.5241;1.4741;1.3713 -;-;-;-;- 126 + 1 2.153 95181.6 1.0 1966 3329 5291 DOHH2_400M_050219_1,5297 DOHH2_400M_050219_1,5297,VLPWYTNNK False False VPDERRYSL 28.483928 378.867907702923 916295.3125 5291.0 ENSG00000134109|ENST00000256497|EDEM1 3.1543424129486084 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5299 28.495 487.0 202660.0 25 0 11705.0 -1 DPMKARVVL 9 141 522.7976191415355 1043.580685349871 2 522.7968627810478 MULTI CID FTMS 0 0 0 5298 141452.640625 0.2177104877799379 5 -0.156869888305664 1 Oxidation (M) _DPM(Oxidation (M))KARVVL_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 34.40172386719151 0.1061884637610825 1 DP{M(Oxidation (M))|F}K 4 -1 33.933 0.0 0.0 3.2515 0.0 0.0 0.0 553.3462527024876 553.3462527024876 7.5831070928538225 0.0 0.0 0.0 0 0.1861818737241735 1.154901959985743 0.0 0.0 DP{M(Oxidation (M))|F}K 3.2515 + + 510 + 1 2.153 81650.4 1.0 1967 3330 5298 DOHH2_400M_050219_1,5299 DOHH2_400M_050219_1,5299,DPMKARVVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5300 28.504 503.0 276090.0 25 0 20452.0 + 5433 DLNKDKPVI 9 155 521.300474223072 1040.586395512944 2 521.3003417849541 MULTI CID FTMS 0 0 0 5298 173130.078125 0.7750196529566588 -1 0.0379638671875 2 Unmodified _DLNKDKPVI_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-4|ETS1;nc|ENSG00000134954|P14921|ETS1 51.41523569358685 0.0372669606867193 1 {I|L}DNKDKPV{I|L} 9 2 + 77.621 0.0 0.0 7.4594 7.4594 92.505 0.0 0.0 0.0 53.44177573599935 11.764870877401478 11.764870877401478 9.208187539523763 0 1.885151878060192 2.0 0.7614393726401688 0.0 {I|L}DNKDKPV{I|L};{I|L}DGGKDKPV{I|L};{I|L}DNKDK{I|L}VP;{I|L}DGGKDK{I|L}VP;{I|L}D[YK]{[HG]|PP}PV{I|L};{NN|[MP]|[D{I|L}]|[EV]}NKDKPV{I|L};{I|L}D[YK]{[HG]|PP}{I|L}VP;{[TV]|[{I|L}S]}{[RE]|[WV]}PV{I|L}D{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}NKPV{I|L}D{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}KNPV{I|L}D{I|L} 7.4594;6.5745;6.2045;5.3196;4.6451;4.5283;3.3903;3.2004;2.7314;2.4264 -;-;-;-;-;+;-;-;-;- + 1234 + 1 2.153 108550.5 1.0 1968 3330 5298 DOHH2_400M_050219_1,5300 DOHH2_400M_050219_1,5300,DLNKDKPVI True True DLNKDKPVI 28.503976 521.300341784954 1223421.875 5298.0 ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;nc|ENSG00000134954|P14921-4|ETS1 4.529632091522217 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5301 28.509 252.0 292030.0 25 0 31543.0 45635 YVMVAGPS 8 109 412.20526016814847 0 412.2023498415947 PEAK CID FTMS 0 0 0 5298 147246.546875 1.0 0 0.0 3 Unmodified _YVMVAGPS_ ENSG00000198805|ENST00000361505|PNP;ENST00000554056.5_1_14:20942916-20944757:+|nuORF;ENST00000556754.1_1_14:20943209-20944757:+|nuORF 15.768221252438446 0.4767174489346095 1 {I|L}EY 3 8 15.635 0.0 0.0 1.9011 0.0 0.0 262.1354826392282 152.04664026431877 414.182122903547 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.6421590589602533 0.0 {I|L}EY 1.9011 - 29 + 1 2.153 60277.1 1.0 1969 3330 5298 DOHH2_400M_050219_1,5301 DOHH2_400M_050219_1,5301,YVMVAGPS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5302 28.518 535.0 203980.0 25 0 33284.0 + 7143 EENFRDRGF 9 106 585.270907057261 1168.5272611813218 2 585.2714111208916 MULTI CID FTMS 0 0 0 5298 116664.3125 1.0 0 0.0 4 Unmodified _EENFRDRGF_ ENST00000469451.1_1_1:203830997-203832824:+|nuORF 55.50274090549119 0.0285720310785888 1 EEN{[NV]|[RG]}{[HG]|PP}NQE 10 6 + 47.866 0.0 0.0 4.0962 4.0962 76.05 0.0 0.0 0.0 4.429147716512546 15.189549981487076 4.429147716512546 4.429147716512546 0 0.5 1.6989700043360187 1.274227503252014 0.0 EEN{[NV]|[RG]}{[HG]|PP}NQE;EEYY[Q{I|L}]VEP;EEYY[Q{I|L}]{I|L}DP;{M(Oxidation (M))|F}QN{[NV]|[RG]}{[MG]|[TS]}RG{M(Oxidation (M))|F};{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{[RE]|[WV]}DRG{M(Oxidation (M))|F};{M(Oxidation (M))|F}QN[HN][KG]{I|L}DP;{M(Oxidation (M))|F}QN[YR][HT]G{M(Oxidation (M))|F};{[ET]|[MV]}{I|L}[Q{I|L}]YY[HC];{M(Oxidation (M))|F}QN{M(Oxidation (M))|F}[TA][HT]G{M(Oxidation (M))|F};{M(Oxidation (M))|F}QN[HN][KG]VEP 4.0962;3.7172;2.9836;2.506;2.1369;1.6837;1.6665;1.6649;1.6273;0.96339 -;-;-;-;-;-;-;-;-;- 168 1 2.153 86745.4 1.0 1970 3330 5298 DOHH2_400M_050219_1,5302 DOHH2_400M_050219_1,5302,EENFRDRGF True True EENFRDRGF 28.518065 585.271411120892 1457853.75 5298.0 ENST00000469451.1_1_1:203830997-203832824:+|nuORF 7.229448477427165 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5303 28.528 584.0 149400.0 25 0 34816.0 + 11130 GEIDRARAIY 10 95 582.3110532797311 1162.6075536262622 2 582.3125488162041 MULTI CID FTMS 0 0 0 5298 84933.5234375 1.0 0 0.0 5 Unmodified _GEIDRARAIY_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7685297-7685959:-|nuORF;ENST00000600230.1_1_19:7685297-7686162:-|nuORF 13.042465956692816 0.6287021003332052 1 {I|L}Q 2 9 21.211 0.0 0.0 1.8245 0.0 0.0 903.454094008878 0.0 903.454094008878 0.0 1.9196282343595783 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 {I|L}Q 1.8245 - 43 + 1 2.153 71243.7 1.0 1971 3330 5298 DOHH2_400M_050219_1,5303 DOHH2_400M_050219_1,5303,GEIDRARAIY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5305 28.535 118.0 563630.0 25 0 50855.0 -1 0 90 502.2676353211039 501.2603588545039 1 502.2686035037041 MULTI CID FTMS 0 0 0 5304 311698.71875 0.6276247648772831 4 -0.1124591827392578 1 1 [NP]D 3 -1 21.109 0.0 0.0 4.2112 0.0 0.0 0.0 172.116077198507 172.116077198507 11.26549460943042 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.3054621874040891 0.2614393726401688 [NP]D 4.2112 - 15 1 2.176 55496.1 1.0 1972 3331 5304 DOHH2_400M_050219_1,5305 DOHH2_400M_050219_1,5305, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5306 28.536 79.0 706110.0 25 0 96835.0 -1 0 65 429.2334375093437 428.2261610427437 1 429.2331420779228 MULTI CID FTMS 0 0 0 5304 632297.5625 0.0855134842152427 8 -0.1791210174560547 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.176 53764.3 1.0 1973 3331 5304 DOHH2_400M_050219_1,5306 DOHH2_400M_050219_1,5306, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5307 28.54 160.0 316970.0 25 0 27812.0 + 32987 SENDTYFKKY 10 82 647.801035036638 1293.587517140076 2 647.8011962771416 MULTI CID FTMS 0 0 0 5304 328477.5625 0.7288473018153295 -1 0.0444107055664062 3 Unmodified _SENDTYFKKY_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 61.08992128646608 0.0337271188422265 1 {[ES]|[DT]|[{I|L}C]}NDTY{M(Oxidation (M))|F}KKY 10 0 {[ES]|[DT]|[{I|L}C]} + + 74.405 6.6109 3.0595 5.7519 5.7519 59.426 0.0 0.0 0.0 0.0 38.541622474749175 0.0 0.0 0 1.6237125054200234 0.0 0.0 0.7302046884880937 + + {[ES]|[DT]|[{I|L}C]}NDTY{M(Oxidation (M))|F}KKY 5.7519 + + 403 + 1 2.176 46817.5 1.0 1974 3331 5304 DOHH2_400M_050219_1,5307 DOHH2_400M_050219_1,5307,SENDTYFKKY True True SENDTYFKKY 28.539619 647.801196277142 14166588.75 5304.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 9.138266563415527 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5308 28.553 800.0 176290.0 25 0 17033.0 + 8592 ETWAMRPW 8 145 538.7539645564447 1075.4933761796892 2 538.7545654177666 MULTI CID FTMS 0 0 0 5304 127865.53125 0.4894396649171372 -6 0.2198905944824218 4 Unmodified _ETWAMRPW_ REV__ENST00000552221.1_1_12:108941677-108954930:-|nuORF 28.486842064014134 0.4448922141344407 1 [{M(Oxidation (M))|F}T]WAT{[HG]|PP}AW 9 -1 + 30.261 0.0 0.0 2.8137 2.8137 72.031 0.0 0.0 0.0 3.811580816780289 5.474090347397709 3.811580816780289 3.811580816780289 0 0.7742275032520141 0.0 0.2887254899964357 0.0 [{M(Oxidation (M))|F}T]WAT{[HG]|PP}AW;{[ET]|[MV]}[{M(Oxidation (M))|F}T]Q{[HG]|PP}AW;[PS]RETA{[ET]|[MV]}W;{[ET]|[MV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{[HG]|PP}AW;[PS]RETAW{[ET]|[MV]};{[ET]|[MV]}PS{[CT]|[{M(Oxidation (M))|F}G]}[RP]W;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[HG]|PP}TA{[ET]|[MV]}W;{[ET]|[MV]}W{[DS]|[MA]|[CV]|TT}[RP]W;[DP]YY[{I|L}P]P[DP];[{M(Oxidation (M))|F}T]{[DA]|[EG]}AT{[HG]|PP}AW 2.8137;2.4593;2.3047;2.2333;2.1;2.0442;2.0037;1.9969;1.9966;1.9575 -;-;-;-;-;-;-;+;-;- + 782 + 1 2.176 112400.7 0.6000000238418579 1975 3331 5304 DOHH2_400M_050219_1,5308 DOHH2_400M_050219_1,5308,ETWAMRPW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5309 28.567 800.0 148010.0 25 0 9548.7 + 32695 SEAATAQREEW 11 139 639.2916828348549 1276.5688127365097 2 639.2923461794853 MULTI CID FTMS 0 0 0 5304 117007.796875 0.5873438040573434 -5 0.2041091918945312 5 Unmodified _SEAATAQREEW_ ENSG00000138668|ENST00000313899|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD 121.92970351907664 0.0462909479988634 1 {[ES]|[DT]|[{I|L}C]}AA{I|L}{M(Oxidation (M))|F}QAGPTW 12 6 + 90.747 0.0 0.0 7.1087 7.1087 87.959 0.0 0.0 0.0 3.2571080307873075 57.338639532026605 3.2571080307873075 6.721675119240516 0 2.385151878060192 0.0 1.7288559305164173 0.3054621874040891 {[ES]|[DT]|[{I|L}C]}AA{I|L}{M(Oxidation (M))|F}QAGPTW;{[ES]|[DT]|[{I|L}C]}AA{I|L}{M(Oxidation (M))|F}QAT[PG]W;{[ES]|[DT]|[{I|L}C]}AA{I|L}{M(Oxidation (M))|F}QQPTW;{[CP]|[EA]}SA{I|L}{M(Oxidation (M))|F}QAGPTW;{[ES]|[DT]|[{I|L}C]}AA{I|L}{M(Oxidation (M))|F}[AG]AGPTW;[TA]DA{I|L}{M(Oxidation (M))|F}QAGPTW;{[ES]|[DT]|[{I|L}C]}WGAQ{M(Oxidation (M))|F}{I|L}ADGP;{[ES]|[DT]|[{I|L}C]}WGAQ{M(Oxidation (M))|F}{I|L}AGDP;{[ET]|[MV]}GA{I|L}{M(Oxidation (M))|F}QAGPTW;{[ES]|[DT]|[{I|L}C]}AATAQ[C(Carbamidomethyl (C))K]SQP 7.1087;6.5821;6.3759;6.1695;6.1567;6.1508;6.1424;5.8306;5.6978;5.6806 -;-;-;-;-;-;-;-;-;- 23230 1 2.176 89392.5 0.6200000047683716 1976 3331 5304 DOHH2_400M_050219_1,5309 DOHH2_400M_050219_1,5309,SEAATAQREEW True True SEAATAQREEW 28.567287 639.292346179485 1061082.25 5304.0 nc|ENSG00000138668|Q14103-3|HNRNPD;;ENSG00000138668|ENST00000313899|HNRNPD 8.43095858891805 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5310 28.573 307.0 295020.0 25 0 20052.0 5637 DPDWVPASAL 10 126 535.759134009147 1069.503715085094 2 535.7594482302666 MULTI CID FTMS 0 0 0 5304 97213.9765625 0.1337269387080991 -7 0.2774105072021484 6 Unmodified _DPDWVPASAL_ ENST00000408991.3_1_19:49621717-49621960:-|nuORF 25.399314129420983 0.3980215340001851 1 ED[WK]TA{I|L} 7 6 45.85 0.0 0.0 4.2871 0.0 0.0 208.08485610175936 0.0 208.08485610175936 0.0 27.65322299927444 0.0 0.0 0 2.1549471895720984 0.0 0.8807196863200843 0.0 ED[WK]TA{I|L} 4.2871 - 562 1 2.176 73852.9 1.0 1977 3331 5304 DOHH2_400M_050219_1,5310 DOHH2_400M_050219_1,5310,DPDWVPASAL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5311 28.583 552.0 235610.0 25 0 19534.0 + 41068 VMPKKSIL 8 138 458.28829633072365 914.5620397282472 2 458.2869750857353 MULTI CID FTMS 0 0 0 5304 93218.15625 0.6062930078503554 -2 0.0823745727539062 7 Unmodified _VMPKKSIL_ ENSG00000171467|ENST00000361428|ZNF318;nc|ENSG00000171467|Q5VUA4-2|ZNF318 25.399314129420983 0.5099049743284904 1 VMPK 4 4 50.165 0.0 0.0 5.4851 0.0 0.0 0.0 456.2822359674438 456.2822359674438 24.14742345588224 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VMPK 5.4851 + + 159 + 1 2.176 102646.0 1.0 1978 3331 5304 DOHH2_400M_050219_1,5311 DOHH2_400M_050219_1,5311,VMPKKSIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5313 28.589 213.0 372200.0 25 0 146930.0 + -1 PAWCIAFV 8 78 482.2413708464666 0 482.2414428591728 PEAK CID FTMS 0 0 0 5312 197103.671875 0.9539840441457452 1 -0.0177726745605468 1 Carbamidomethyl (C) _PAWC(Carbamidomethyl (C))IAFV_ REV__ENSG00000132911|ENST00000255262|NMUR2 6.354104778181461 0.5763711549229614 1 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.32198 0.0 0.0 730.3108534099271 82.06684290103749 812.3776963109646 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.32198 + + 6 + 1 2.176 68455.7 1.0 1979 3332 5312 DOHH2_400M_050219_1,5313 DOHH2_400M_050219_1,5313,PAWCIAFV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5314 28.594 273.0 180010.0 25 0 19645.0 -1 0 89 548.2911875185396 547.2839110519395 1 548.2916137576103 MULTI CID FTMS 0 0 0 5312 106083.4765625 0.4497140528585076 5 -0.0983104705810546 2 1 Q 1 -1 12.128 0.0 0.0 2.2161 0.0 0.0 401.2144510683442 0.0 401.2144510683442 0.0 1.2910379265159475 0.0 0.0 0 0.0 0.0 0.0 0.1643943297944484 Q 2.2161 - 24 + 1 2.176 44402.0 1.0 1980 3332 5312 DOHH2_400M_050219_1,5314 DOHH2_400M_050219_1,5314, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5315 28.596 103.0 524730.0 25 0 32161.0 + 7714 ELDAVQREY 9 79 561.7748992302933 1121.5352455273865 2 561.7751953005791 MULTI CID FTMS 0 0 0 5312 363337.375 0.7939362337904972 -4 0.1737537384033203 3 Unmodified _ELDAVQREY_ ENSG00000080986|ENST00000261597|NDC80 41.95555342248728 0.0647214845423414 1 E{I|L}DAVQ{[RE]|[WV]}Y 9 0 + 76.78 0.0 0.0 6.846 6.846 90.451 0.0 0.0 0.0 55.81067678033959 8.411290632962718 8.411290632962718 9.208187539523747 0 0.2887254899964357 2.0 0.3252574989159953 0.3807196863200844 + + E{I|L}DAVQ{[RE]|[WV]}Y;E{I|L}DAV[AG]{[RE]|[WV]}Y;E{I|L}DAVM[KS]{[ET]|[MV]};E{I|L}WV[PS]A{[SA]|[TG]}Y;E{I|L}DAVH[Y{I|L}]Y;E{I|L}WV[PS][QT]Y;E{I|L}WVM[KS]{[ET]|[MV]};E{I|L}T[PS]Q{[RE]|[WV]}Y;E{I|L}DAVQ[HD][VP];E{I|L}T[PS]M[KS]{[ET]|[MV]} 6.846;6.0249;5.9135;5.6855;5.6797;5.4425;5.3311;5.1741;4.9355;4.2416 +;-;-;-;-;-;-;-;-;- + 593 + 1 2.176 48003.8 1.0 1981 3332 5312 DOHH2_400M_050219_1,5315 DOHH2_400M_050219_1,5315,ELDAVQREY True True ELDAVQREY 28.596423 561.775195300579 4031091.75 5312.0 ENSG00000080986|ENST00000261597|NDC80 6.933346430460612 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5316 28.6 207.0 408590.0 25 0 44075.0 + 11189 GEMPRNLREY 10 81 422.2081971905198 1263.6027621717594 3 422.2078430056572 MULTI CID FTMS 0 0 0 5312 251573.1875 0.9179168619295048 -4 0.1737537384033203 4 Unmodified _GEMPRNLREY_ ENSG00000104549|ENST00000265896|SQLE 24.95707706330732 0.4079579053029958 1 WMPR 4 7 43.8 0.0 0.0 3.4663 0.0 0.0 0.0 690.3207491510374 690.3207491510374 19.10728139283883 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.805462187404089 WMPR 3.4663 - 131 + 1 2.176 71214.6 1.0 1982 3332 5312 DOHH2_400M_050219_1,5316 DOHH2_400M_050219_1,5316,GEMPRNLREY False True GEMPRNLREY 28.600352 422.207843005657 1437860.25 5312.0 ENSG00000104549|ENST00000265896|SQLE 8.276179631551107 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5318 28.611 487.0 237300.0 25 0 30363.0 + 6316 DVIGKAKSL 9 130 465.7847157386641 929.5548785441282 2 465.7846862673759 MULTI CID FTMS 0 0 0 5317 170883.328125 0.5512264846780517 -3 0.1164188385009765 1 Unmodified _DVIGKAKSL_ ENSG00000105821|ENST00000379263|DNAJC2;ENST00000475065.5_1_7:102953018-102963086:-|nuORF;ENST00000492497.1_1_7:102956426-102956597:-|nuORF;nc|ENSG00000105821|Q99543-2|DNAJC2 55.23464941255904 0.0288927259679799 1 [DV]{I|L}GKAKS{I|L} 9 0 + 80.816 0.0 0.0 8.6941 8.6941 95.281 0.0 0.0 0.0 45.70319581505754 12.983324797206263 12.983324797206263 12.165762445130497 0 1.7231975075880328 2.0 1.079689690656103 0.4247425010840047 + + [DV]{I|L}GKAKS{I|L};[DV]{I|L}[KQ]KS{I|L};[DV]{I|L}GKAK{[TV]|[{I|L}S]};[DV]{I|L}[KQ]K{[TV]|[{I|L}S]};[KG]{I|L}AKS{I|L}[DV];[KA]VAKS{I|L}[DV];[KG]AK{I|L}S{I|L}[DV];[KG]{I|L}A[DV]K{[TV]|[{I|L}S]};[KG]AKS{I|L}{I|L}[DV];[KQ]K{I|L}S{I|L}[DV] 8.6941;7.3853;4.14;3.8952;2.2579;1.932;1.7578;1.5731;1.5684;1.487 +;-;+;-;-;-;-;-;-;- + 770 + 1 2.176 91901.7 1.0 1983 3333 5317 DOHH2_400M_050219_1,5318 DOHH2_400M_050219_1,5318,DVIGKAKSL True True DVIGKAKSL 28.611489 465.784686267376 1395173.75 5317.0 ENST00000492497.1_1_7:102956426-102956597:-|nuORF;;ENST00000475065.5_1_7:102953018-102963086:-|nuORF;;ENSG00000105821|ENST00000379263|DNAJC2;;nc|ENSG00000105821|Q99543-2|DNAJC2 5.318583170572917 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5319 28.625 800.0 193000.0 25 0 16604.0 + 6325 DVKAKLHEL 9 157 526.8086301986052 1051.6027074640103 2 526.8089477419853 MULTI CID FTMS 0 0 0 5317 101729.8515625 0.2175926591245895 -6 0.2289695739746093 2 Unmodified _DVKAKLHEL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 103.82355648334676 0.0089708497247674 1 DVKAK{I|L}HE{I|L} 9 0 + 110.79 0.0 0.0 10.535 10.535 99.176 0.0 0.0 0.0 54.91704916093701 28.60612915975635 28.60612915975635 39.499069334430544 0 1.9049471895720984 2.0 1.4392404878284264 0.3807196863200844 + + DVKAK{I|L}HE{I|L};DVKAK{I|L}[QP]GP;DVKAKPA[NP]{I|L};[DV]KAPKA[NP]{I|L};{I|L}TQAK{I|L}HE{I|L};[DV]K[HV]KVD{I|L};DVKAKPAQVP;DVKAKP[Q{I|L}]GP;DVKAK{I|L}[NP]AP;DVKAKPA{[VA]|[{I|L}G]}GP 10.535;6.7794;6.7485;6.2687;6.0955;5.9289;5.9268;5.8054;5.7363;5.5259 +;-;-;-;-;-;-;-;-;- + 2161 + 1 2.176 119775.3 0.5400000214576721 1984 3333 5317 DOHH2_400M_050219_1,5319 DOHH2_400M_050219_1,5319,DVKAKLHEL True True DVKAKLHEL 28.625321 526.808947741985 4109617.0 5317.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 4.382555802663167 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5320 28.63 263.0 220280.0 25 0 22420.0 -1 0 116 532.2978919855241 531.290615518924 1 532.2962524294853 MULTI CID FTMS 0 0 0 5317 104522.4375 0.2045101562681044 48 -2.288036346435547 3 1 P 1 -1 9.464 0.0 0.0 1.7813 0.0 0.0 416.2269691339615 0.0 416.2269691339615 0.0 0.1316446936117454 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.7813 - 31 + 1 2.176 48891.9 1.0 1985 3333 5317 DOHH2_400M_050219_1,5320 DOHH2_400M_050219_1,5320, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5321 28.637 362.0 313420.0 25 0 18794.0 + 5436 DLNKRVQDL 9 151 367.5404141854716 1099.599413156615 3 367.5401489138603 MULTI CID FTMS 0 0 0 5317 92833.71875 0.7428476620150526 -5 0.1915264129638672 4 Unmodified _DLNKRVQDL_ ENSG00000084652|ENST00000373610|TXLNA 20.453626601364224 0.2830276176381075 1 {NN|[MP]|[D{I|L}]|[EV]}[RN]KN{NN|[MP]|[D{I|L}]|[EV]}{I|L} 9 4 + 44.371 0.0 0.0 4.0352 4.0352 85.958 0.0 0.0 0.0 18.65742484373364 30.8759123398972 18.65742484373364 44.37076236157729 0 0.0 2.0 0.4247425010840047 0.6989700043360187 {NN|[MP]|[D{I|L}]|[EV]}[RN]KN{NN|[MP]|[D{I|L}]|[EV]}{I|L} 4.0352 - 93 1 2.176 93478.3 1.0 1986 3333 5317 DOHH2_400M_050219_1,5321 DOHH2_400M_050219_1,5321,DLNKRVQDL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5324 28.646 67.0 1339000.0 25 0 146980.0 + 8130 EPKLKYERL 9 95 392.5645135270114 1174.6717111812343 3 392.5641052126884 MULTI CID FTMS 0 0 0 5323 709352.8125 0.5719583387633279 -4 0.1124591827392578 1 Unmodified _EPKLKYERL_ ENSG00000006715|ENST00000310301|VPS41;nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41 26.020703789607367 0.2001090068861241 1 EPK{I|L}KYER{I|L} 9 0 + 52.718 0.0 0.0 4.4879 4.4879 84.154 0.0 0.0 0.0 14.973024840566469 11.114079997524785 11.114079997524785 11.114079997524785 0 0.4247425010840047 0.0 0.0 0.2887254899964357 + + EPK{I|L}KYER{I|L};EPK{I|L}KY{I|L}{[RE]|[WV]};EPK{I|L}K{I|L}Y{[RE]|[WV]};[VP]{[SA]|[TG]}{I|L}KYER{I|L};EPK{I|L}[Y{I|L}][SG]R{I|L};EPK{I|L}[Y{I|L}]K{[RE]|[WV]};[VP]{[SA]|[TG]}{I|L}KY{I|L}{[RE]|[WV]};[VP]{[SA]|[TG]}{I|L}K{I|L}Y{[RE]|[WV]} 4.4879;3.5418;3.5313;2.2141;1.8079;1.6457;1.268;1.2575 +;-;-;-;-;-;-;- + 113 + 1 2.197 77720.3 1.0 1987 3335 5323 DOHH2_400M_050219_1,5324 DOHH2_400M_050219_1,5324,EPKLKYERL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5325 28.648 87.0 869090.0 25 0 58212.0 + 6327 DVKAKLHEL 9 105 351.54183771944406 1051.6036837585325 3 351.5414001345634 MULTI CID FTMS 0 0 0 5323 507092.46875 0.5732217276134748 -4 0.1124591827392578 2 Unmodified _DVKAKLHEL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 27.628801355627647 0.1796483985696185 1 DV{I|L}{M(Oxidation (M))|F}K 5 6 63.802 0.0 0.0 6.0671 0.0 0.0 0.0 446.2516268365844 446.2516268365844 51.03769575094791 0.0 0.0 0.0 0 0.1595680409956017 2.0 0.0 0.4247425010840047 DV{I|L}{M(Oxidation (M))|F}K 6.0671 - 214 + 1 2.197 66546.5 1.0 1988 3335 5323 DOHH2_400M_050219_1,5325 DOHH2_400M_050219_1,5325,DVKAKLHEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5327 28.658 462.0 300580.0 25 0 36073.0 + 8131 EPKLKYERL 9 119 588.3422284502896 1174.669903967379 2 588.3423950076103 MULTI CID FTMS 0 0 0 5326 178729.15625 0.6758430944177831 -3 0.04718017578125 1 Unmodified _EPKLKYERL_ ENSG00000006715|ENST00000310301|VPS41;nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41 43.9818466556824 0.0535980856389242 1 EPK{I|L}KYER{I|L} 9 0 + 63.151 0.0 0.0 5.3761 5.3761 87.597 0.0 0.0 0.0 43.62551825494835 10.150312510170778 10.150312510170778 12.28933227713462 0 0.7614393726401688 0.9208187539523752 0.0 0.4247425010840047 + + EPK{I|L}KYER{I|L};EPK{I|L}K{I|L}{[RE]|[WV]}Y;EPK{I|L}{I|L}Y[SG]R{I|L};EPK{I|L}{I|L}K{[RE]|[WV]}Y;EPK{I|L}KY[W{I|L}]V;EPK{I|L}K{I|L}[WY]V;EPK{I|L}{I|L}Y[WK]V;EPK{I|L}{I|L}K[WY]V;E{I|L}[KP]KYER{I|L};EP{I|L}{I|L}KY[SG]R{I|L} 5.3761;4.3299;4.2923;3.9237;3.8173;3.6674;3.5175;3.2612;2.7733;2.0782 +;-;-;-;-;-;-;-;-;- + 413 + 1 2.197 106736.2 1.0 1989 3336 5326 DOHH2_400M_050219_1,5327 DOHH2_400M_050219_1,5327,EPKLKYERL True True EPKLKYERL 28.658266 588.34239500761 7302984.125 5326.0 nc|ENSG00000006715|P49754-3|VPS41;;nc|ENSG00000006715|P49754-2|VPS41;;ENSG00000006715|ENST00000310301|VPS41 6.272598107655843 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5328 28.662 173.0 334560.0 25 0 34047.0 + 22909 LSDKNIEQY 9 99 555.2778386635351 1108.5411243938702 2 555.2776367068291 MULTI CID FTMS 0 0 0 5326 360428.1875 0.5535691590561339 -4 0.0649528503417968 2 Unmodified _LSDKNIEQY_ ENSG00000122068|ENST00000241502|FYTTD1;nc|ENSG00000122068|Q96QD9-2|FYTTD1;nc|ENSG00000122068|Q96QD9-3|FYTTD1 47.594388314883695 0.0456443387682827 1 {I|L}S 2 7 35.433 0.0 0.0 3.1964 0.0 0.0 0.0 905.3986300104124 905.3986300104124 4.732908049652536 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.0 0.0 + {I|L}S 3.1964 + + 430 + 1 2.197 49253.6 1.0 1990 3336 5326 DOHH2_400M_050219_1,5328 DOHH2_400M_050219_1,5328,LSDKNIEQY True True LSDKNIEQY 28.661647 555.277636706829 3315409.5 5326.0 nc|ENSG00000122068|Q96QD9-2|FYTTD1;;ENSG00000122068|ENST00000241502|FYTTD1;;nc|ENSG00000122068|Q96QD9-3|FYTTD1 6.892083326975505 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5329 28.667 295.0 258150.0 25 0 13494.0 + 31817 RTAHVILRY 9 96 376.8931402036581 1127.6575912111743 3 376.8925964236259 MULTI CID FTMS 0 0 0 5326 108432.0 0.8093997774620881 1 -0.0333576202392578 3 Unmodified _RTAHVILRY_ ENSG00000159461|ENST00000290649|AMFR 18.1463463914782 0.3454829746528889 1 V{I|L}YR{I|L} 5 6 20.706 0.0 0.0 1.8362 0.0 0.0 465.2469924927362 0.0 465.2469924927362 0.0 7.606763564740149 0.0 0.0 0 0.5 0.0 0.0 0.0 V{I|L}YR{I|L} 1.8362 - 64 + 1 2.197 66714.6 1.0 1991 3336 5326 DOHH2_400M_050219_1,5329 DOHH2_400M_050219_1,5329,RTAHVILRY False True RTAHVILRY 28.667054 376.892596423626 750218.25 5326.0 ENSG00000159461|ENST00000290649|AMFR 1.6838014721870422 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5330 28.681 800.0 75388.0 25 0 6284.8 8616 EVEEDEYKAFY 11 100 711.3080201479903 1420.6014873627803 2 711.3064453005791 MULTI CID FTMS 0 0 0 5326 90109.9140625 0.8772594105360096 2 -0.0374317169189453 4 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 17.11289562659939 0.6791789249425932 1 [QA]HDEAQNQA{M(Oxidation (M))|F}Y 12 8 + 72.768 0.0 0.0 5.1224 5.1224 79.839 0.0 0.0 0.0 6.348943214391269 57.28389031924032 6.348943214391269 4.771212547196612 0 0.8182503180159344 0.0 0.3054621874040891 1.4698565171985374 [QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDAEQNQA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQGGQA{M(Oxidation (M))|F}Y;[QA]HDEAQN[AG]A{M(Oxidation (M))|F}Y;[QA]HDEA[AG]NQA{M(Oxidation (M))|F}Y;[QA]HDAEQQNA{M(Oxidation (M))|F}Y;[QA]E[HD]AQNQA{M(Oxidation (M))|F}Y;[QA]HDAEQGGQA{M(Oxidation (M))|F}Y;[QA]HDAEQN[AG]A{M(Oxidation (M))|F}Y 5.1224;4.7865;4.6425;4.4819;4.4819;4.4819;4.3066;4.2102;4.1461;4.1461 -;-;-;-;-;-;-;-;-;- 1559 1 2.197 50279.8 0.5400000214576721 1992 3336 5326 DOHH2_400M_050219_1,5330 DOHH2_400M_050219_1,5330,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5333 28.697 526.0 245710.0 25 0 20782.0 + 383 AEDKSWRVRY 10 116 437.2266614509102 1308.6581549529308 3 437.2260009646416 MULTI CID FTMS 0 0 0 5332 159074.546875 1.0 0 0.0 1 Unmodified _AEDKSWRVRY_ ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 17.04857598603903 0.5614834650426465 1 AEDK 4 6 62.735 0.0 0.0 4.7938 0.0 0.0 0.0 862.4329064243024 862.4329064243024 27.302046884880937 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.3807196863200844 + AEDK 4.7938 + + 197 + 1 2.197 105639.8 1.0 1993 3338 5332 DOHH2_400M_050219_1,5333 DOHH2_400M_050219_1,5333,AEDKSWRVRY False True AEDKSWRVRY 28.696749 437.226000964642 878267.0625 5332.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 4.927415529886882 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5334 28.704 409.0 203800.0 25 0 9724.2 + 26496 NTVTVCMDY 9 135 523.2211473118152 1044.4277416904304 2 523.2211791872978 MULTI CID FTMS 0 0 0 5332 161224.109375 0.4925582168896885 -2 0.0374317169189453 2 Unmodified _NTVTVCMDY_ ENSG00000139793|ENST00000679496|MBNL2;ENSG00000152601|ENST00000324210|MBNL1;ENST00000460166.1_1_3:152132852-152173345:+|nuORF;nc|ENSG00000139793|Q5VZF2-2|MBNL2;nc|ENSG00000139793|Q5VZF2-3|MBNL2;nc|ENSG00000139793|Q5VZF2|MBNL2;nc|ENSG00000152601|Q9NR56-2|MBNL1;nc|ENSG00000152601|Q9NR56-3|MBNL1;nc|ENSG00000152601|Q9NR56-4|MBNL1;nc|ENSG00000152601|Q9NR56-6|MBNL1;nc|ENSG00000152601|Q9NR56-7|MBNL1;nc|ENSG00000152601|Q9NR56|MBNL1 15.847184025352805 0.4077185912009129 1 {[QS]|[NT]}D 3 6 27.548 0.0 0.0 2.6376 0.0 0.0 0.0 711.2948702447874 711.2948702447874 2.5996808788509185 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QS]|[NT]}D 2.6376 - 294 + 1 2.197 69671.2 1.0 1994 3338 5332 DOHH2_400M_050219_1,5334 DOHH2_400M_050219_1,5334,NTVTVCMDY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5335 28.707 175.0 291270.0 25 0 32699.0 -1 0 96 499.2751401775048 498.2678637109048 1 501.2785217165947 MULTI CID FTMS 0 0 0 5332 130436.1015625 0.4249047822354914 -9 0.2389945983886718 3 1 H 1 -1 10.713 0.0 0.0 2.1501 0.0 0.0 343.20174540211417 0.0 343.20174540211417 0.0 2.303654192657465 0.0 0.0 0 0.0 0.0 0.0 0.0 H 2.1501 - 13 + 1 2.197 44316.7 1.0 1995 3338 5332 DOHH2_400M_050219_1,5335 DOHH2_400M_050219_1,5335, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5337 28.716 234.0 220400.0 25 0 25085.0 + + 35704 LTDDKLSQY 9 86 541.7722353785101 1081.52991782382 2 541.7729980349541 MULTI CID FTMS 0 0 0 5336 145347.484375 0.4546454658026637 -2 0.0265750885009765 1 Unmodified _SVGDLSTQLY_ ENSG00000121879|ENST00000263967|PIK3CA 16.149105407346934 0.5765757077271437 1 {I|L}TD 3 -1 48.94 0.0 0.0 4.5251 0.0 0.0 0.0 749.3480929010374 749.3480929010374 34.3360688456422 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}TD 4.5251 - 139 + 1 2.215 49216.8 1.0 1996 3339 5336 DOHH2_400M_050219_1,5337 DOHH2_400M_050219_1,5337,SVGDLSTQLY False False LTDDKLSQY 28.715734 541.772998034954 1550339.75 5336.0 ENSG00000121879|ENST00000263967|PIK3CA 3.617514769236247 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5338 28.721 315.0 219300.0 25 0 10171.0 + -1 KEAIYKERW 9 111 408.2239360924252 0 408.2238342165947 PEAK CID FTMS 0 0 0 5336 96478.765625 1.0 0 0.0 2 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))WELLYL_ nc|ENSG00000174953|Q9H2U1-2|DHX36;ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 9.38312468134398 0.3193474221348066 1 K 1 -1 6.9897 0.0 0.0 0.85823 0.0 0.0 197.10600099168795 486.2112268499412 683.3172278416291 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.85823 - 41 + 1 2.215 62195.6 1.0 1997 3339 5336 DOHH2_400M_050219_1,5338 DOHH2_400M_050219_1,5338,LLCWELLYL False False KEAIYKERW 28.721482 408.223834216595 751805.0625 5336.0 nc|ENSG00000174953|Q9H2U1-2|DHX36;;ENSG00000174953|ENST00000496811|DHX36;;nc|ENSG00000174953|Q9H2U1-3|DHX36 1.0258258978525798 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5339 28.725 169.0 349920.0 25 0 28079.0 + 386 AEDMETKIKNY 11 97 447.8833606133256 1340.628252440177 3 447.8833495974541 MULTI CID FTMS 0 0 0 5336 305181.59375 0.8551022775878925 -2 0.0265750885009765 3 Unmodified _AEDMETKIKNY_ ENSG00000126267|ENST00000649813|COX6B1 51.41523569358685 0.1097924807909074 1 ETK{I|L}KNY 7 4 40.2 0.0 0.0 2.9986 0.0 0.0 446.1502847907914 0.0 446.1502847907914 0.0 16.657460728295135 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.7059771852360797 + ETK{I|L}KNY 2.9986 + + 333 + 1 2.215 53492.4 1.0 1998 3339 5336 DOHH2_400M_050219_1,5339 DOHH2_400M_050219_1,5339,AEDMETKIKNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5340 28.733 451.0 342870.0 25 0 27625.0 + 40815 VLLTKKSL 8 138 451.3078732775171 900.6011936218342 2 451.3076049685478 MULTI CID FTMS 0 0 0 5336 150928.15625 0.9440354619653788 1 -0.0679950714111328 4 Unmodified _VLLTKKSL_ ENSG00000169710|ENST00000306749|FASN 34.40172386719151 0.3279500639400574 1 V{I|L}{I|L}TKKS{I|L} 8 0 + 74.021 0.0 0.0 8.2191 8.2191 89.26 0.0 0.0 0.0 6.0784094103974695 6.971614108293863 6.0784094103974695 6.0784094103974695 0 0.555462187404089 2.0 1.0189301784845295 0.0 + + V{I|L}{I|L}TKKS{I|L};{I|L}V{I|L}TKKS{I|L};V{I|L}{I|L}TKV[KT];{I|L}V{I|L}TKV[KT] 8.2191;7.5442;7.445;6.7701 +;-;-;- + 252 + 1 2.215 124004.1 1.0 1999 3339 5336 DOHH2_400M_050219_1,5340 DOHH2_400M_050219_1,5340,VLLTKKSL False True VLLTKKSL 28.732772 451.307604968548 862635.6875 5336.0 ENSG00000169710|ENST00000306749|FASN 1.8728785316149397 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5341 28.743 610.0 256870.0 25 0 14370.0 19402 LESKRLNL 8 163 486.7954620956003 971.5763712580008 2 486.7957031130791 MULTI CID FTMS 0 0 0 5336 141680.203125 0.7462920100996583 -2 0.0265750885009765 5 Unmodified _LESKRLNL_ ENSG00000139370|ENST00000266771|SLC15A4;nc|ENSG00000139370|Q8N697-2|SLC15A4 65.23502041540118 0.1164516490932339 1 {[QN]|[E{I|L}]|[KN]}RVKTN{I|L} 8 4 + 56.85 0.0 0.0 5.8513 5.8513 76.964 0.0 0.0 0.0 0.3492426964820581 11.8943306386236 0.3492426964820581 0.3492426964820581 0 1.0451140161145327 1.3979400086720375 1.2931576817365438 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}RVKTN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]KTN{I|L};{I|L}ESK[R{I|L}]N{I|L};{[QN]|[E{I|L}]|[KN]}RVKTGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]KTGG{I|L};{I|L}ESK[R{I|L}]{I|L}N;{[QN]|[E{I|L}]|[KN]}RVKSQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]KSQ{I|L};E{I|L}SK[R{I|L}]N{I|L};{I|L}ESK[R{I|L}]QV 5.8513;5.8154;5.0132;4.898;4.8621;4.3822;4.1381;4.1022;4.0614;3.958 -;-;+;-;-;-;-;-;-;- + 1865 1 2.215 120359.8 1.0 2000 3339 5336 DOHH2_400M_050219_1,5341 DOHH2_400M_050219_1,5341,LESKRLNL True False EIRVKTNL 28.743411 486.795703113079 819666.5625 5336.0 nc|ENSG00000112335|O60493-3|SNX3;;ENSG00000112335|ENST00000230085|SNX3 2.441991766293844 2.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5342 28.757 800.0 230120.0 25 0 9119.4 + 4737 DEFGDSRRRW 10 166 441.877581458847 1322.610914976741 3 441.8776428103447 MULTI CID FTMS 0 0 0 5336 80625.2578125 0.3583708637640849 -2 0.0265750885009765 6 Unmodified _DEFGDSRRRW_ ENST00000375457.2_2_13:113862417-113862534:-|nuORF 36.39500950444726 0.1956349533321693 1 DE{M(Oxidation (M))|F}G[EC]SK 8 6 68.894 0.0 0.0 5.2089 0.0 0.0 0.0 424.2196444147094 424.2196444147094 52.55063163131986 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8807196863200843 0.8494850021680094 DE{M(Oxidation (M))|F}G[EC]SK 5.2089 - 673 + 1 2.215 143535.8 0.9100000262260436 2001 3339 5336 DOHH2_400M_050219_1,5342 DOHH2_400M_050219_1,5342,DEFGDSRRRW False True DEFGDSRRRW 28.757228 441.877642810345 1056157.0 5336.0 ENST00000375457.2_2_13:113862417-113862534:-|nuORF 4.016552925109863 3.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5343 28.762 231.0 451580.0 25 0 23345.0 + 26379 NTDDTIGDLK 10 139 546.2642816351108 1090.5140103370215 2 546.2623779177666 MULTI CID FTMS 0 0 0 5336 155628.328125 0.2466470340486472 -3 0.0599327087402343 7 Unmodified _NTDDTIGDLK_ ENSG00000198258|ENST00000586895|UBL5;ENST00000589372.1_1_19:9939013-9939570:+|nuORF 70.92866715596459 0.0189067049654103 1 NTDDT{I|L}GD{I|L}K 10 0 + 101.95 0.0 0.0 9.3487 9.3487 95.219 0.0 0.0 0.0 75.20758151658504 17.513487579716767 17.513487579716767 10.0 0 0.6861818737241735 2.0 0.8494850021680094 0.4476212463643423 + + NTDDT{I|L}GD{I|L}K;NTDDT{I|L}G{I|L}DK;NTD[KS]{[{M(Oxidation (M))|F}H]|[RQ]}DK 9.3487;8.4317;5.4379 +;-;- + 377 + 1 2.215 85347.9 1.0 2002 3339 5336 DOHH2_400M_050219_1,5343 DOHH2_400M_050219_1,5343,NTDDTIGDLK True True NTDDTIGDLK 28.761567 546.262377917767 2929367.5 5336.0 ENST00000589372.1_1_19:9939013-9939570:+|nuORF;;ENSG00000198258|ENST00000586895|UBL5;;UBL5|p.R15P|1|0.13|ENSG00000198258|chr19:9828381-9828381|G/C|missense_variant 7.407488981882731 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5344 28.775 800.0 236840.0 25 0 20315.0 + 31782 RSNDGAYSL 9 151 491.7326185958432 981.4506842584864 2 491.7329589724541 MULTI CID FTMS 0 0 0 5336 135128.171875 0.5020156779856316 -1 0.022500991821289 8 Unmodified _RSNDGAYSL_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENSG00000147854|ENST00000276893|UHRF2;ENSG00000276043|ENST00000650932|UHRF1;ENST00000484159.5_1_9:6434093-6493966:+|nuORF;ENST00000540175.1_1_12:20704556-20705942:+|nuORF;nc|ENSG00000147854|Q96PU4-2|UHRF2;nc|ENSG00000276043|Q96T88-2|UHRF1 38.17557092003332 0.0854718145212029 1 {[TV]|[{I|L}S]}C[EP]AYS{I|L} 9 4 + 50.786 0.0 0.0 5.1746 5.1746 80.819 0.0 0.0 0.0 6.18948444925195 21.55712714800928 6.18948444925195 5.682503180159344 0 0.9247425010840048 1.3979400086720375 0.6747425010840047 0.0 {[TV]|[{I|L}S]}C[EP]AYS{I|L};{[TV]|[{I|L}S]}YQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{I|L};[MT]A[EP]AYS{I|L};[TA]{[WN]|[YH]}GAYS{I|L};[TA]{[WN]|[YH]}QYS{I|L};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{I|L};[{M(Oxidation (M))|F}T][HS]QYS{I|L};[{M(Oxidation (M))|F}V]WW[MT]{I|L};[{M(Oxidation (M))|F}V]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[MT]{I|L};[{M(Oxidation (M))|F}V]WW{I|L}[MT] 5.1746;4.5956;4.105;3.8206;3.774;3.6112;3.5732;3.5392;3.5312;3.4177 -;-;-;-;-;-;-;-;-;- 799 1 2.215 146243.0 0.5699999928474426 2003 3339 5336 DOHH2_400M_050219_1,5344 DOHH2_400M_050219_1,5344,RSNDGAYSL True True RSNDGAYSL 28.775384 491.732958972454 1189243.875 5336.0 chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;;ENST00000540175.1_1_12:20704556-20705942:+|nuORF;;nc|ENSG00000147854|Q96PU4-2|UHRF2;;ENST00000484159.5_1_9:6434093-6493966:+|nuORF;;ENSG00000147854|ENST00000276893|UHRF2;;nc|ENSG00000276043|Q96T88-2|UHRF1;;ENSG00000276043|ENST00000650932|UHRF1 5.031318187713623 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5346 28.783 185.0 490460.0 25 0 66983.0 + 32986 SENDTYFKKY 10 77 432.2034441376297 1293.5885030130892 3 432.2034179568291 MULTI CID FTMS 0 0 0 5345 173018.296875 0.1529286186139304 7 -0.2870101928710937 1 Unmodified _SENDTYFKKY_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 9.38312468134398 0.6832340498775793 1 Y 1 9 11.259 0.0 0.0 0.87037 0.0 0.0 1112.5146484982438 0.0 1112.5146484982438 0.0 4.269359821608809 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.87037 + + 30 + 1 2.229 79741.5 1.0 2004 3340 5345 DOHH2_400M_050219_1,5346 DOHH2_400M_050219_1,5346,SENDTYFKKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5347 28.797 800.0 97155.0 25 0 10744.0 + 7029 EELDPESREY 10 119 633.7780494847897 1265.5415460363793 2 633.7800170779228 MULTI CID FTMS 0 0 0 5345 27563.29296875 0.0396867882343306 9 -0.431915283203125 2 Unmodified _EELDPESREY_ ENSG00000183617|ENST00000330133|MRPL54 17.44264345198275 0.5548713957087773 1 EE{I|L}DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EQ{M(Oxidation (M))|F} 10 4 + 55.556 0.0 0.0 4.3899 4.3899 74.065 0.0 0.0 0.0 24.25968732272281 5.593080109070122 5.593080109070122 2.0289375146764854 0 0.5 1.6989700043360187 0.2887254899964357 0.3054621874040891 EE{I|L}DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EQ{M(Oxidation (M))|F};EE{I|L}DY{[HG]|PP}EQ{M(Oxidation (M))|F};EE{I|L}DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{M(Oxidation (M))|F}Q;EE{I|L}DY{[HG]|PP}E{M(Oxidation (M))|F}Q;EE{I|L}DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[AG]{M(Oxidation (M))|F};EE{I|L}DY[WH]Q{M(Oxidation (M))|F};EE{I|L}DY{[HG]|PP}E[AG]{M(Oxidation (M))|F};EE{I|L}DY[WH]{M(Oxidation (M))|F}Q;{NN|[MP]|[D{I|L}]|[EV]}P[YQ]YD{I|L}[HC];EE{I|L}DY[WH][AG]{M(Oxidation (M))|F} 4.3899;4.2296;3.948;3.7876;3.4244;3.2686;3.2641;2.8267;2.4133;2.2996 -;-;-;-;-;-;-;-;-;- 359 + 1 2.229 65101.8 0.6700000166893005 2005 3340 5345 DOHH2_400M_050219_1,5347 DOHH2_400M_050219_1,5347,EELDPESREY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5349 28.803 218.0 454890.0 25 0 28964.0 + 3149 AVRPKVLM 8 107 457.2864233393055 912.558293745411 2 457.2864257693291 MULTI CID FTMS 0 0 0 5348 333980.15625 0.7967592902188482 -2 0.0892715454101562 1 Unmodified _AVRPKVLM_ ENSG00000109475|ENST00000394667|RPL34;ENST00000503574.1_1_4:109543664-109543775:+|nuORF 24.67388899826682 0.525179942228231 1 [KP]VN{I|L}V{I|L}M 8 5 [KP]VN{I|L}V + + 29.024 -1.2932 -0.19882 3.1805 3.1805 50.861 0.0 0.0 0.0 0.0 13.450528104279016 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 [KP]VN{I|L}V{I|L}M 3.1805 - 227 + 1 2.229 79607.2 1.0 2006 3341 5348 DOHH2_400M_050219_1,5349 DOHH2_400M_050219_1,5349,AVRPKVLM False True AVRPKVLM 28.803394 457.286425769329 2075228.0 5348.0 ENSG00000109475|ENST00000394667|RPL34;;ENST00000503574.1_1_4:109543664-109543775:+|nuORF 4.939207077026367 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5350 28.807 212.0 279990.0 25 0 26229.0 + 29114 QERPGNFY 8 95 505.73803327902806 1009.461513624856 2 505.7379333376884 MULTI CID FTMS 0 0 0 5348 209587.375 0.8790492034152501 -2 0.0892715454101562 2 Unmodified _QERPGNFY_ ENSG00000155629|ENST00000339364|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1 42.09456458481378 0.1992492688217789 1 GA{[RE]|[WV]}{M(Oxidation (M))|F}Y 6 5 39.628 0.0 0.0 3.9256 0.0 0.0 268.11729628730626 0.0 268.11729628730626 0.0 31.211375162600703 0.0 0.0 0 0.8494850021680094 0.0 0.3494850021680094 0.8252574989159953 GA{[RE]|[WV]}{M(Oxidation (M))|F}Y 3.9256 - 127 1 2.229 49876.4 1.0 2007 3341 5348 DOHH2_400M_050219_1,5350 DOHH2_400M_050219_1,5350,QERPGNFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5351 28.811 163.0 339420.0 25 0 29306.0 + 12294 GSDKINYTY 9 98 530.7504963478692 1059.4864397625383 2 530.7512084841728 MULTI CID FTMS 0 0 0 5348 217459.171875 0.4254328659805437 -3 0.1117725372314453 3 Unmodified _GSDKINYTY_ ENSG00000186416|ENST00000688521|NKRF;nc|ENSG00000186416|O15226-2|NKRF;nc|ENSG00000186416|O15226|NKRF 17.11289562659939 0.3734572693229295 1 TY 2 7 29.776 0.0 0.0 2.8104 0.0 0.0 777.3655118834353 0.0 777.3655118834353 0.0 16.588709367037282 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 + TY 2.8104 + + 136 + 1 2.229 46982.2 1.0 2008 3341 5348 DOHH2_400M_050219_1,5351 DOHH2_400M_050219_1,5351,GSDKINYTY False True GSDKINYTY 28.810621 530.751208484173 2608415.25 5348.0 nc|ENSG00000186416|O15226|NKRF;;nc|ENSG00000186416|O15226-2|NKRF;;ENSG00000186416|ENST00000688521|NKRF 5.780644575754802 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5352 28.813 137.0 279580.0 25 0 27021.0 + 8593 ETWAMRPW 8 68 538.7539645564447 1075.4933761796892 2 538.7547485232353 MULTI CID FTMS 0 0 0 5348 167994.1875 0.6430428750752695 4 -0.1611213684082031 4 Unmodified _ETWAMRPW_ REV__ENST00000552221.1_1_12:108941677-108954930:-|nuORF 9.347437153973935 0.7675937258251505 1 W 1 -1 14.604 0.0 0.0 1.3579 0.0 0.0 871.403164242969 0.0 871.403164242969 0.0 0.3393220009542812 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.3579 + + 31 + 1 2.229 34756.9 1.0 2009 3341 5348 DOHH2_400M_050219_1,5352 DOHH2_400M_050219_1,5352,ETWAMRPW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5353 28.821 410.0 146360.0 25 0 12124.0 + 387 AEDMETKIKNY 11 103 671.3209627476741 1340.627372562148 2 671.3222534060478 MULTI CID FTMS 0 0 0 5348 141602.09375 0.9375074612382852 1 -0.0348320007324218 5 Unmodified _AEDMETKIKNY_ ENSG00000126267|ENST00000649813|COX6B1 92.20098385977256 0.000583166206543 1 {[CP]|[EA]}DMETK{I|L}KNY 11 0 + 90.825 0.0 0.0 6.7748 6.7748 92.468 0.0 0.0 0.0 52.04726134383624 13.080923170097831 13.080923170097831 12.935695106011837 0 2.399649864804614 0.0 0.3494850021680094 1.4361818737241734 + + {[CP]|[EA]}DMETK{I|L}KNY;{[CP]|[EA]}DMETK{I|L}KGGY;[WE]{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))E]|[WC]}{I|L}KNY;[TP][QP]{I|L}KTEM[C(Carbamidomethyl (C))H];[MD]ET[K{I|L}]KDY[QA];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AMETK[YR][QA];[MD]E{M(Oxidation (M))|F}[PG]K[YR][QA];[MD]ET[K{I|L}]K[YN]{[CP]|[EA]};{[YD]|[{M(Oxidation (M))|F}M]}[KP][DV]KDY[QA];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DT[K{I|L}]KDY[QA] 6.7748;5.8099;1.9065;1.9015;1.6065;0.84496;0.66633;0.56372;0.54337;0.50466 +;-;-;-;-;-;-;-;-;- + 454 + 1 2.229 48607.6 1.0 2010 3341 5348 DOHH2_400M_050219_1,5353 DOHH2_400M_050219_1,5353,AEDMETKIKNY True True AEDMETKIKNY 28.82073 671.322253406048 2746564.875 5348.0 ENSG00000126267|ENST00000649813|COX6B1 8.326312065124512 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5354 28.832 621.0 304570.0 25 0 48161.0 15113 IMVLGMQLS 9 151 496.271347295996 990.528141658792 2 496.2718078494072 MULTI CID FTMS 0 0 0 5348 105528.0390625 0.1420283719663381 -4 0.1158466339111328 6 Unmodified _IMVLGMQLS_ ENSG00000173391|ENST00000309539|OLR1;nc|ENSG00000173391|P78380-2|OLR1;nc|ENSG00000173391|P78380-3|OLR1 25.399314129420983 0.2080152500878129 1 {I|L}D 2 8 29.83 0.0 0.0 3.0115 0.0 0.0 0.0 759.3931981607343 759.3931981607343 6.922366216770502 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 {I|L}D 3.0115 - 402 + 1 2.229 148195.6 1.0 2011 3341 5348 DOHH2_400M_050219_1,5354 DOHH2_400M_050219_1,5354,IMVLGMQLS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5356 28.838 196.0 242620.0 25 0 18197.0 43943 YGLCFFHAL 9 83 535.759134009147 1069.503715085094 2 535.7592651247978 MULTI CID FTMS 0 0 0 5355 296308.0 0.4075994332897643 4 -0.1477298736572265 1 Unmodified _YGLCFFHAL_ ENSG00000118997|ENST00000312428|DNAH7;nc|ENSG00000118997|Q8WXX0-2|DNAH7 14.581692164780916 0.4419739649577144 1 EDT[WK]A{I|L} 7 7 47.941 0.0 0.0 4.4826 0.0 0.0 208.0840506337252 0.0 208.0840506337252 0.0 35.17708357038254 0.0 0.0 0 1.8807196863200843 0.0 0.2887254899964357 0.3807196863200844 EDT[WK]A{I|L} 4.4826 - 116 + 1 2.229 46135.8 1.0 2012 3342 5355 DOHH2_400M_050219_1,5356 DOHH2_400M_050219_1,5356,YGLCFFHAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5357 28.846 449.0 197270.0 25 0 16988.0 31780 RSLGIQWVY 9 135 561.3092852653527 1120.6040175975054 2 561.3114501833916 MULTI CID FTMS 0 0 0 5355 95369.1640625 0.3076337504955757 -7 0.190765380859375 2 Unmodified _RSLGIQWVY_ ENST00000526402.1_1_11:43543828-43544716:+|nuORF 7.910154910731844 0.6385446671287552 1 [K{I|L}]DAV[PS]A{[SA]|[TG]}Y 11 10 + 29.441 0.0 0.0 2.6273 2.6273 66.888 0.0 0.0 0.0 17.22289807887176 3.2210667880990584 3.2210667880990584 0.3778856088939974 0 0.0 0.0 0.2742275032520141 0.0 [K{I|L}]DAV[PS]A{[SA]|[TG]}Y;[K{I|L}]DAVQ{[RE]|[WV]}Y;[K{I|L}]WV[PS]A{[SA]|[TG]}Y;[K{I|L}]DAV[PS][QT]Y;[K{I|L}]WVQ{[RE]|[WV]}Y;[K{I|L}]DAVQ[HD][VP];[K{I|L}]DAV[AG]{[RE]|[WV]}Y;[K{I|L}]DAVN{[YC]|[HE]}[VP];[K{I|L}]DAVQ[HV][DP];[K{I|L}]WV[PS][QT]Y 2.6273;2.5936;2.0405;2.0405;2.0155;1.9996;1.7718;1.6445;1.4823;1.4576 -;-;-;-;-;-;-;-;-;- 249 + 1 2.229 70706.7 1.0 2013 3342 5355 DOHH2_400M_050219_1,5357 DOHH2_400M_050219_1,5357,RSLGIQWVY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5358 28.855 528.0 236860.0 25 0 67910.0 -1 0 120 474.2893300330061 473.2820535664061 1 474.2888976931572 MULTI CID FTMS 0 0 0 5355 102457.4609375 0.1279589224164241 18 -0.8947086334228516 3 1 {I|L}{I|L}TQ 4 -1 + 28.069 0.0 0.0 5.9307 5.9307 92.044 0.0 0.0 0.0 8.860566476931627 11.079053973095192 8.860566476931627 26.0621595109912 0 0.0 2.0 0.0 0.0 {I|L}{I|L}TQ;[Q{I|L}][{I|L}T] 5.9307;0.42397 -;- 56 1 2.229 101081.3 1.0 2014 3342 5355 DOHH2_400M_050219_1,5358 DOHH2_400M_050219_1,5358, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5359 28.863 454.0 206670.0 25 0 15973.0 27786 PLPPPPPPP 9 129 454.7652942368306 907.5160355404612 2 454.7663146853447 MULTI CID FTMS 0 0 0 5355 96684.40625 1.0 0 0.0 4 Unmodified _PLPPPPPPP_ ENSG00000009694|ENST00000371130|TENM1;ENSG00000100312|ENST00000216139|ACR;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000117560|ENST00000367721|FASLG;ENSG00000124496|ENST00000695948|TRERF1;ENSG00000126460|ENST00000246794|PRRG2;ENSG00000132510|ENST00000448097|KDM6B;ENSG00000138771|ENST00000296043|SHROOM3;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000141456|ENST00000572293|PELP1;ENSG00000146083|ENST00000274811|RNF44;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000160685|ENST00000535420|ZBTB7B;ENSG00000170234|ENST00000307063|PWWP2A;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000175073|ENST00000310421|VCPIP1;ENSG00000175785|ENST00000393140|PRIMA1;ENSG00000176182|ENST00000322217|MYPOP;ENSG00000188779|ENST00000380035|SKOR1;ENSG00000204334|ENST00000697325|ERICH2;ENSG00000248905|ENST00000616417|FMN1;ENSG00000259956|ENST00000563281|RBM15B;ENST00000361272.8_2_8:17102747-17104366:-|nuORF;ENST00000379565.7_1_X:20227482-20284914:-|nuORF;ENST00000508096.1_1_10:126605730-126631034:+|nuORF;ENST00000508478.1_1_5:175957081-175957609:-|nuORF;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENST00000596700.5_1_19:50084718-50093643:+|nuORF;ENST00000597121.5_1_19:50086773-50093643:+|nuORF;nc|ENSG00000009694|Q9UKZ4-2|TENM1;nc|ENSG00000110076|P58401|NRXN2;nc|ENSG00000117560|P48023-2|FASLG;nc|ENSG00000124496|Q96PN7|TRERF1;nc|ENSG00000132510|O15054-1|KDM6B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000146083|Q7L0R7-2|RNF44;nc|ENSG00000160685|O15156-2|ZBTB7B;nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170234|Q96N64-2|PWWP2A;nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000175785|Q86XR5-2|PRIMA1;nc|ENSG00000188779|P84550-3|SKOR1;nc|ENSG00000248905|Q68DA7-5|FMN1;REV__ENSG00000048991|ENST00000683871|R3HDM1;REV__ENSG00000066855|ENST00000262146|MTFR1;REV__ENSG00000068489|ENST00000262293|PRR11;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000100592|ENST00000360909|DAAM1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000119596|ENST00000325680|YLPM1;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000125740|ENST00000353609|FOSB;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__ENSG00000132510|ENST00000448097|KDM6B;REV__ENSG00000135250|ENST00000393651|SRPK2;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138081|ENST00000403359|FBXO11;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__ENSG00000141431|ENST00000269197|ASXL3;REV__ENSG00000145414|ENST00000274054|NAF1;REV__ENSG00000146122|ENST00000274867|DAAM2;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152409|ENST00000396137|JMY;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000157827|ENST00000288670|FMNL2;REV__ENSG00000162775|ENST00000369784|RBM15;REV__ENSG00000164916|ENST00000328914|FOXK1;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000173166|ENST00000319170|RAPH1;REV__ENSG00000173917|ENST00000330070|HOXB2;REV__ENSG00000175073|ENST00000310421|VCPIP1;REV__ENSG00000176624|ENST00000406189|MEX3C;REV__ENSG00000186472|ENST00000333891|PCLO;REV__ENSG00000187017|ENST00000645284|ESPN;REV__ENSG00000187164|ENST00000355371|SHTN1;REV__ENSG00000203485|ENST00000392634|INF2;REV__ENSG00000215045|ENST00000457091|GRID2IP;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000274209|ENST00000620264|ANTXRL;REV__ENST00000324225.8_1_11:117049861-117050083:+|nuORF;REV__ENST00000358635.7_1_4:140005384-140005639:-|nuORF;REV__ENST00000368219.1_1_1:156698226-156698472:-|nuORF;REV__ENST00000379565.7_1_X:20227482-20284914:-|nuORF;REV__ENST00000424808.6_1_8:66582187-66620357:+|nuORF;REV__ENST00000471339.1_1_5:173036657-173043649:-|nuORF;REV__ENST00000519935.1_1_7:27209203-27211037:+|nuORF;REV__ENST00000587358.1_1_19:45974364-45976267:+|nuORF;REV__nc|ENSG00000048991|Q15032-2|R3HDM1;REV__nc|ENSG00000048991|Q15032-3|R3HDM1;REV__nc|ENSG00000048991|Q15032-4|R3HDM1;REV__nc|ENSG00000048991|Q15032|R3HDM1;REV__nc|ENSG00000066855|Q15390-2|MTFR1;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100592|Q9Y4D1-3|DAAM1;REV__nc|ENSG00000100592|Q9Y4D1|DAAM1;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000119596|P49750-1|YLPM1;REV__nc|ENSG00000119596|P49750-3|YLPM1;REV__nc|ENSG00000125740|P53539-10|FOSB;REV__nc|ENSG00000125740|P53539-2|FOSB;REV__nc|ENSG00000125740|P53539-3|FOSB;REV__nc|ENSG00000125740|P53539-5|FOSB;REV__nc|ENSG00000125740|P53539-8|FOSB;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1;REV__nc|ENSG00000132510|O15054-1|KDM6B;REV__nc|ENSG00000135250|P78362|SRPK2;REV__nc|ENSG00000138081|Q86XK2-4|FBXO11;REV__nc|ENSG00000138081|Q86XK2-5|FBXO11;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3;REV__nc|ENSG00000140836|Q15911-2|ZFHX3;REV__nc|ENSG00000146122|Q86T65-4|DAAM2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000157827|Q96PY5|FMNL2;REV__nc|ENSG00000162775|Q96T37-2|RBM15;REV__nc|ENSG00000162775|Q96T37-3|RBM15;REV__nc|ENSG00000162775|Q96T37-4|RBM15;REV__nc|ENSG00000170004|Q12873-3|CHD3;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__nc|ENSG00000187017|B1AK53-2|ESPN;REV__nc|ENSG00000187164|A0MZ66-2|SHTN1;REV__nc|ENSG00000187164|A0MZ66-3|SHTN1;REV__nc|ENSG00000187164|A0MZ66-4|SHTN1;REV__nc|ENSG00000187164|A0MZ66-5|SHTN1;REV__nc|ENSG00000187164|A0MZ66-6|SHTN1;REV__nc|ENSG00000187164|A0MZ66-8|SHTN1;REV__nc|ENSG00000203485|Q27J81-2|INF2;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__PCLO|p.V3720Sfs*2|1|0.13|ENSG00000186472|chr7:82916828-82916829|-/T|frameshift_variant 56.04830969593885 0.0282699710924866 1 [{I|L}P]PPPP[YK] 8 3 + 36.903 0.0 0.0 4.0664 4.0664 83.306 0.0 0.0 0.0 11.26851079634196 25.48314189308524 11.26851079634196 12.946990157421537 0 1.0941876774005248 1.3979400086720375 0.0 0.0 [{I|L}P]PPPP[YK];[{I|L}P][YK]P[YK];{[HG]|PP}{I|L}PPP[YK];[{I|L}P]P[YK][YK] 4.0664;2.6397;2.2903;1.2197 -;-;-;- 95 1 2.229 76092.8 1.0 2015 3342 5355 DOHH2_400M_050219_1,5359 DOHH2_400M_050219_1,5359,PLPPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5360 28.869 307.0 328550.0 25 0 28800.0 + 23008 LSHPSGREVL 10 124 365.5372050512816 1093.589785754045 3 365.5367614626884 MULTI CID FTMS 0 0 0 5355 91474.9765625 0.5535329383100506 -3 0.1241035461425781 5 Unmodified _LSHPSGREVL_ REV__ENSG00000151240|ENST00000280886|DIP2C;REV__ENSG00000160305|ENST00000417564|DIP2A;REV__ENST00000478105.5_1_21:47981571-47987532:+|nuORF;REV__nc|ENSG00000160305|Q14689-6|DIP2A 7.945399516374404 0.6898843699695153 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M 3 -1 25.328 0.0 0.0 2.3161 0.0 0.0 0.0 725.4198998500009 725.4198998500009 0.0944714022234975 0.0 0.0 0.0 0 0.0 2.0 0.2396518287104437 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M 2.3161 - 38 1 2.229 86426.8 1.0 2016 3342 5355 DOHH2_400M_050219_1,5360 DOHH2_400M_050219_1,5360,LSHPSGREVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5362 28.88 440.0 156560.0 25 0 10577.0 + 6326 DVKAKLHEL 9 124 526.8086301986052 1051.6027074640103 2 526.8088256716728 MULTI CID FTMS 0 0 0 5361 47914.33984375 0.1024852435805974 4 -0.1936969757080078 1 Unmodified _DVKAKLHEL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 21.59015148037692 0.2564810811560323 1 DVKA 4 5 53.928 0.0 0.0 5.1282 0.0 0.0 0.0 635.3516329400999 635.3516329400999 30.11561899423569 0.0 0.0 0.0 0 0.1989700043360188 2.0 0.0 0.0 + DVKA 5.1282 + + 212 + 1 2.243 55773.8 1.0 2017 3343 5361 DOHH2_400M_050219_1,5362 DOHH2_400M_050219_1,5362,DVKAKLHEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5363 28.884 198.0 466420.0 25 0 159360.0 18884 LATEVALL 8 75 415.253442696867 0 415.2536193728447 PEAK CID FTMS 0 0 0 5361 198923.265625 0.1195715227499315 33 -1.7228431701660156 2 Unmodified _LATEVALL_ ENST00000540844.5_1_21:30446011-30446101:-|nuORF 5.760428011301431 0.5786759180849727 1 A 1 7 1.1092 0.0 0.0 0.13389 0.0 0.0 672.36604874647 82.06685053043202 754.432899276902 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.13389 + + 3 + 1 2.243 78445.2 1.0 2018 3343 5361 DOHH2_400M_050219_1,5363 DOHH2_400M_050219_1,5363,LATEVALL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5364 28.898 800.0 123710.0 25 0 10400.0 -1 0 128 605.337915450393 604.3306389837929 1 607.3434326052666 MULTI CID FTMS 0 0 0 5361 119564.71875 0.8439716046103906 -4 0.1613082885742187 3 1 H 1 -1 12.218 0.0 0.0 2.0218 0.0 0.0 449.2643070519554 0.0 449.2643070519554 0.0 0.7985042143375587 0.0 0.0 0 0.0 0.0 0.0 0.0 H 2.0218 - 12 + 1 2.243 74704.5 0.6200000047683716 2019 3343 5361 DOHH2_400M_050219_1,5364 DOHH2_400M_050219_1,5364, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5365 28.912 800.0 27420.0 25 0 2686.3 -1 0 38 1123.3681966701874 3367.0827606107623 3 1124.038867175579 MULTI CID FTMS 0 0 0 5361 115989.6875 1.0 0 0.0 4 1 N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3 -1 4.437 0.0 0.0 0.13178 0.0 0.0 2959.939917483672 0.0 2959.939917483672 0.0 0.4575749056067497 0.0 0.0 0 0.0 0.0 0.0 0.0 N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 0.13178 - 22 + 1 2.243 31506.6 0.449999988079071 2020 3343 5361 DOHH2_400M_050219_1,5365 DOHH2_400M_050219_1,5365, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5367 28.921 356.0 195660.0 25 0 13272.0 + + 14345 SELQSQVRY 9 109 555.2778386635351 1108.5411243938702 2 555.2776367068291 MULTI CID FTMS 0 0 0 5366 134026.65625 0.2058468953442162 4 -0.2204303741455078 1 Unmodified _IESDQVKQY_ ENSG00000002834|ENST00000318008|LASP1;nc|ENSG00000002834|Q14847-2|LASP1;ENST00000584106.1_1_17:37026403-37055075:+|nuORF 29.081581746732265 0.1611639662936252 1 {[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{I|L}DEQY 9 -1 + 32.087 0.0 0.0 2.8946 2.8946 79.295 0.0 0.0 0.0 0.3166583156350882 12.645228064086002 0.3166583156350882 10.323189597066897 0 1.718765315847925 0.0 0.3807196863200844 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{I|L}DEQY;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}[KG]DEQY;{[TV]|[{I|L}S]}H[WY]{I|L}QY;{[QN]|[E{I|L}]|[KN]}S{I|L}{I|L}DEQY;{[ES]|[DT]|[{I|L}C]}{I|L}[KP][MN]QY;{[QD]|[EN]|[WG]|[KD]|[RS]}RRDEQY;{[ES]|[DT]|[{I|L}C]}{I|L}QS[RV][SG]{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}K[KG]DEQY;[AG]{I|L}[WQ]M{I|L}QY;{[ES]|[DT]|[{I|L}C]}K{[CP]|[EA]}{[QV]|[N{I|L}]|[RA]|[KV]}RY 2.8946;1.9633;1.9074;1.7756;1.5832;1.5565;1.4195;1.2372;0.64946;0.57023 -;-;-;-;-;-;-;-;-;- 610 1 2.243 56477.8 1.0 2021 3344 5366 DOHH2_400M_050219_1,5367 DOHH2_400M_050219_1,5367,IESDQVKQY False False SELQSQVRY 28.920925 555.277636706829 1310542.25 5366.0 ENSG00000002834|ENST00000318008|LASP1;;nc|ENSG00000002834|Q14847-2|LASP1;;ENST00000584106.1_1_17:37026403-37055075:+|nuORF 4.627812544504802 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5368 28.928 397.0 173700.0 25 0 12006.0 + -1 IEAKMEMAI 9 113 526.2624566324113 1050.5103603316225 2 526.2623168826103 MULTI CID FTMS 0 0 0 5366 126758.421875 0.9355294442710816 -2 0.0803794860839843 2 Oxidation (M) _IEAKM(Oxidation (M))EMAI_ REV__ENSG00000078295|ENST00000338316|ADCY2;REV__ENST00000513693.1_1_5:7690761-7690995:+|nuORF;REV__nc|ENSG00000078295|Q08462-2|ADCY2 26.88365393820708 0.1891292719743517 1 QW[PA]{[SA]|[TG]}A{I|L} 8 -1 34.368 0.0 0.0 3.2716 0.0 0.0 208.08511550117345 0.0 208.08511550117345 0.0 18.883622483540243 0.0 0.0 0 1.7134679910804405 0.0 0.4247425010840047 0.2887254899964357 QW[PA]{[SA]|[TG]}A{I|L} 3.2716 - 150 1 2.243 58670.6 1.0 2022 3344 5366 DOHH2_400M_050219_1,5368 DOHH2_400M_050219_1,5368,IEAKMEMAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5369 28.936 423.0 189420.0 25 0 22767.0 + 13113 HETFSQHTF 9 123 567.2540423010385 1132.4935316688768 2 567.2537719607353 MULTI CID FTMS 0 0 0 5366 124421.1015625 0.9098369721515944 -2 0.0803794860839843 3 Unmodified _HETFSQHTF_ ENSG00000148110|ENST00000375344|MFSD14B;nc|ENSG00000148110|Q5SR56-2|MFSD14B;nc|ENSG00000290770|Q5VZR4|MFSD14CP 82.5293158979368 0.0169039238599547 1 {[YC]|[HE]}T[QA]YHT{M(Oxidation (M))|F} 9 3 + 70.653 0.0 0.0 6.2387 6.2387 90.249 0.0 0.0 0.0 12.896457634695537 16.478174818886366 12.896457634695537 10.395906230238118 0 1.329689690656103 0.958607314841775 1.4916440611282626 0.0 {[YC]|[HE]}T[QA]YHT{M(Oxidation (M))|F};{[YC]|[HE]}TN[{M(Oxidation (M))|F}T]HT{M(Oxidation (M))|F};{[YC]|[HE]}T[QA]YTH{M(Oxidation (M))|F};[HT]{M(Oxidation (M))|F}{[QS]|[NT]}EHT{M(Oxidation (M))|F};[HT]E[QA]YHT{M(Oxidation (M))|F};{[YC]|[HE]}TGG[{M(Oxidation (M))|F}T]HT{M(Oxidation (M))|F};{[YC]|[HE]}T[QA]YT{M(Oxidation (M))|F}H;[{M(Oxidation (M))|F}T]H{[QS]|[NT]}EHT{M(Oxidation (M))|F};{[YC]|[HE]}TN[{M(Oxidation (M))|F}T]TH{M(Oxidation (M))|F};[HT]{M(Oxidation (M))|F}{[QS]|[NT]}ETH{M(Oxidation (M))|F} 6.2387;5.3207;5.1839;5.0999;4.7514;4.5076;4.4261;4.3498;4.2659;4.0451 -;-;-;-;-;-;-;-;-;- 1281 1 2.243 61486.4 1.0 2023 3344 5366 DOHH2_400M_050219_1,5369 DOHH2_400M_050219_1,5369,HETFSQHTF True True HETFSQHTF 28.935585 567.253771960735 941610.75 5366.0 nc|ENSG00000148110|Q5SR56-2|MFSD14B;;nc|ENSG00000290770|Q5VZR4|MFSD14CP;;ENSG00000148110|ENST00000375344|MFSD14B 6.080992062886556 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5370 28.944 477.0 209270.0 25 0 18027.0 + -1 EENDKLRQEF 10 130 436.5456470885321 0 436.5454894900322 PEAK CID FTMS 0 0 0 5366 98065.59375 1.0 0 0.0 4 Carbamidomethyl (C) _FCLWLLPC(Carbamidomethyl (C))QQ_ nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1 4.189502756095605 0.3961065659209837 1 {I|L} 1 -1 6.9897 0.0 0.0 0.80242 0.0 0.0 179.7110318706205 575.2584322565061 754.9694641271267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80242 + + 24 + 1 2.243 84142.3 1.0 2024 3344 5366 DOHH2_400M_050219_1,5370 DOHH2_400M_050219_1,5370,FCLWLLPCQQ False False EENDKLRQEF 28.944019 436.545489490032 481485.875 5366.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 4.748666922251384 3.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5371 28.958 800.0 109100.0 25 0 10544.0 + 18018 KSFEDIHQY 9 137 583.7782095927704 1165.5418662523407 2 584.2792846560478 MULTI CID FTMS 0 0 0 5366 93499.640625 0.7974225190239772 5 -0.2954273223876953 5 Unmodified _KSFEDIHQY_ ENSG00000174775|ENST00000311189|HRAS;nc|ENSG00000174775|P01112-2|HRAS 34.93206674587334 0.1032771302489716 1 {I|L}HQY 4 5 27.572 0.0 0.0 2.3656 0.0 0.0 606.267465472847 0.0 606.267465472847 0.0 15.666315003689297 0.0 0.0 0 1.0356668758921828 0.0 0.0 0.3494850021680094 + {I|L}HQY 2.3656 + + 641 + 1 2.243 68032.4 0.550000011920929 2025 3344 5366 DOHH2_400M_050219_1,5371 DOHH2_400M_050219_1,5371,KSFEDIHQY True True KSFEDIHQY 28.957852 583.7783 937462.4375 5366.0 nc|ENSG00000174775|P01112-2|HRAS;;ENSG00000174775|ENST00000311189|HRAS 5.914651234944661 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5373 28.965 194.0 324160.0 25 0 54461.0 + -1 NEPETCLYSYF 11 84 711.8000159536352 1421.5854789740704 2 711.8000976443291 MULTI CID FTMS 0 0 0 5372 361211.0625 0.1653124553422331 -3 0.1262893676757812 1 Carbamidomethyl (C) _NEPETC(Carbamidomethyl (C))LYSYF_ REV__ENSG00000167703|ENST00000301335|SLC43A2;REV__ENST00000572135.5_1_17:1488956-1531469:-|nuORF;REV__ENST00000575944.1_1_17:1519839-1531078:-|nuORF;REV__nc|ENSG00000167703|Q8N370-2|SLC43A2;REV__nc|ENSG00000167703|Q8N370-3|SLC43A2 8.155526934196011 0.8366696279279818 1 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y 13 -1 + 88.735 0.0 0.0 6.242 6.242 82.334 0.0 0.0 0.0 5.246907182741381 11.448658907276382 5.246907182741381 3.06412186623416 0 1.242992819099939 1.154901959985743 0.3054621874040891 1.1237125054200234 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAGAQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;[QA]HDEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGA[AG]DA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAWGA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEQAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y;[QA]DHEAGAQDA{M(Oxidation (M))|F}Y 6.242;6.0264;5.8729;5.7748;5.6405;5.6038;5.5741;5.5599;5.5574;5.5535 -;-;-;-;-;-;-;-;-;- 2375 1 2.254 48397.0 1.0 2026 3345 5372 DOHH2_400M_050219_1,5373 DOHH2_400M_050219_1,5373,NEPETCLYSYF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5374 28.979 800.0 90731.0 25 0 9637.0 + 40104 VGKVLWLSL 9 107 507.8189219711356 1013.6232910090712 2 507.8189880251884 MULTI CID FTMS 0 0 0 5372 56638.1171875 0.6304050057591134 1 -0.0214405059814453 2 Unmodified _VGKVLWLSL_ REV__ENST00000355295.4_1_9:100193224-100193323:+|nuORF 23.1484247019978 0.2366544122328345 1 {[TV]|[{I|L}S]}[Q{I|L}][Q{I|L}]{I|L}S{I|L} 9 -1 {[TV]|[{I|L}S]}[Q{I|L}][Q{I|L}]{I|L} + + 21.013 12.019 1.5109 2.0731 2.0731 48.95 0.0 0.0 0.0 0.0 8.538719643217618 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}[Q{I|L}][Q{I|L}]{I|L}S{I|L} 2.0731 - 122 + 1 2.254 62312.4 0.4799999892711639 2027 3345 5372 DOHH2_400M_050219_1,5374 DOHH2_400M_050219_1,5374,VGKVLWLSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5376 28.985 161.0 268430.0 25 0 23142.0 13928 HYGVKSNSL 9 88 502.762282310488 1003.510011687776 2 502.7611266970634 MULTI CID FTMS 0 0 0 5375 182028.21875 1.0 0 0.0 1 Unmodified _HYGVKSNSL_ ENSG00000197102|ENST00000360184|DYNC1H1 10.823927491677226 0.5436922275383211 1 [{M(Oxidation (M))|F}V]HH{I|L} 5 7 15.642 0.0 0.0 1.5587 0.0 0.0 0.0 367.1584261529906 367.1584261529906 3.167338036745022 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]HH{I|L} 1.5587 - 69 + 1 2.254 41041.1 1.0 2028 3346 5375 DOHH2_400M_050219_1,5376 DOHH2_400M_050219_1,5376,HYGVKSNSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5377 28.995 574.0 155760.0 25 0 18470.0 + 5484 DLRTTSTL 8 123 453.7479364263477 905.4813199194954 2 453.7481567263603 MULTI CID FTMS 0 0 0 5375 78806.7890625 0.8775916298417741 1 -0.0831718444824218 2 Unmodified _DLRTTSTL_ ENSG00000138468|ENST00000394095|SENP7;nc|ENSG00000138468|Q9BQF6-2|SENP7;nc|ENSG00000138468|Q9BQF6-3|SENP7;nc|ENSG00000138468|Q9BQF6-4|SENP7;nc|ENSG00000138468|Q9BQF6-5|SENP7 37.97399986684836 0.2681860861828418 1 ST{I|L} 3 5 37.351 0.0 0.0 4.125 0.0 0.0 586.3107166974625 0.0 586.3107166974625 0.0 25.361753205006607 0.0 0.0 0 0.7614393726401688 0.0 0.805462187404089 0.0 + ST{I|L} 4.125 + + 240 1 2.254 72883.2 1.0 2029 3346 5375 DOHH2_400M_050219_1,5377 DOHH2_400M_050219_1,5377,DLRTTSTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5378 29.003 456.0 378260.0 25 0 54883.0 + 12359 GTDTGVVQY 9 163 470.2244246645895 938.434296395979 2 470.2240478396416 MULTI CID FTMS 0 0 0 5375 145868.515625 0.4488772617115966 -1 0.0214405059814453 3 Unmodified _GTDTGVVQY_ ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF 37.97399986684836 0.0865783450051559 1 {[SA]|[TG]}DTRVQY 8 2 {[SA]|[TG]}DTRV + + 22.474 21.05 3.3449 2.3949 2.3949 49.312 0.0 0.0 0.0 0.0 -0.4153110408050544 -0.4153110408050544 0.0 0 0.0 0.0 0.0 0.5 {[SA]|[TG]}DTRVQY 2.3949 - 246 + 1 2.254 134519.7 1.0 2030 3346 5375 DOHH2_400M_050219_1,5378 DOHH2_400M_050219_1,5378,GTDTGVVQY True True GTDTGVVQY 29.003122 470.224047839642 1570126.625 5375.0 ENST00000512095.5_1_4:39217537-39276579:+|nuORF;;ENSG00000157796|ENST00000399820|WDR19 6.646511077880859 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5379 29.007 222.0 349060.0 25 0 20469.0 + 7723 ELDPDNETY 9 125 548.2270699735258 1094.4395870138517 2 548.2264892458916 MULTI CID FTMS 0 0 0 5375 125155.75 0.7351493276890282 -1 0.0214405059814453 4 Unmodified _ELDPDNETY_ ENSG00000104969|ENST00000221566|SGTA 10.823927491677226 0.5436922275383211 1 GTY 3 7 21.599 0.0 0.0 1.9735 0.0 0.0 755.2965644081859 0.0 755.2965644081859 0.0 2.390690719683093 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 GTY 1.9735 - 435 + 1 2.254 66235.9 1.0 2031 3346 5375 DOHH2_400M_050219_1,5379 DOHH2_400M_050219_1,5379,ELDPDNETY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5380 29.021 800.0 172610.0 25 0 16569.0 + 19322 ELITKAVA 8 172 422.7605799600827 843.5066069869654 2 422.7602111697197 MULTI CID FTMS 0 0 0 5375 111583.796875 1.0 0 0.0 5 Unmodified _LELTLGKA_ ENSG00000184357|ENST00000331442|H1-5;ENSG00000168298|ENST00000304218|H1-4;ENSG00000187837|ENST00000343677|H1-2;ENSG00000124575|ENST00000244534|H1-3 21.74664581756881 0.5868176546531598 1 {[QN]|[E{I|L}]|[KN]}{I|L}[RK]W 6 4 + 31.857 0.0 0.0 3.7768 3.7768 72.36 0.0 0.0 0.0 17.87787469514015 0.8265059764113403 0.8265059764113403 2.32148706256168 0 0.3494850021680094 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}[RK]W;{[QN]|[E{I|L}]|[KN]}{I|L}T[KA]VA;{[QN]|[E{I|L}]|[KN]}{I|L}T[KQ]{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}T[KA]G{I|L} 3.7768;3.5015;3.4554;2.9359 -;-;-;- 234 + 1 2.254 105637.5 0.4699999988079071 2032 3346 5375 DOHH2_400M_050219_1,5380 DOHH2_400M_050219_1,5380,LELTLGKA False False ELITKAVA 29.021133 422.76021116972 529258.9375 5375.0 ENSG00000184357|ENST00000331442|H1-5;;ENSG00000168298|ENST00000304218|H1-4;;ENSG00000187837|ENST00000343677|H1-2;;ENSG00000124575|ENST00000244534|H1-3 1.2765243848164876 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5381 29.035 800.0 174770.0 25 0 7250.9 + 7788 ELHKKLLSV 9 164 533.8341672221595 1065.653781511119 2 533.8345825076103 MULTI CID FTMS 0 0 0 5375 100045.96875 1.0 0 0.0 6 Unmodified _ELHKKLLSV_ ENSG00000179151|ENST00000315127|EDC3 61.60191391372663 0.0251951588191061 1 {[QN]|[E{I|L}]|[KN]}HK 4 5 37.677 0.0 0.0 3.5356 0.0 0.0 0.0 555.3519088083005 555.3519088083005 -1.7339374311232802 0.0 -1.7339374311232802 0.0 0 0.75 1.6989700043360187 0.0 0.0 + {[QN]|[E{I|L}]|[KN]}HK 3.5356 + + 749 + 1 2.254 110503.6 0.550000011920929 2033 3346 5375 DOHH2_400M_050219_1,5381 DOHH2_400M_050219_1,5381,ELHKKLLSV True True ELHKKLLSV 29.034976 533.83458250761 488424.5 5375.0 ENSG00000179151|ENST00000315127|EDC3 5.850109577178955 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5382 29.049 800.0 263920.0 25 0 43777.0 25556 NEVDGQDYHF 10 132 612.2518831370774 1222.4892133409546 2 612.2520629763603 MULTI CID FTMS 0 0 0 5375 101580.4921875 0.172489156598887 -3 0.1105251312255859 7 Unmodified _NEVDGQDYHF_ ENSG00000082458|ENST00000374360|DLG3;nc|ENSG00000082458|Q92796-2|DLG3;nc|ENSG00000082458|Q92796-3|DLG3 24.99096001346401 0.4071966087057876 1 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 8 + 114.12 0.0 0.0 9.3348 9.3348 92.859 0.0 0.0 0.0 7.269987279362624 74.67773246295147 7.269987279362624 9.164539485499247 0 1.305462187404089 0.0 2.079689690656103 1.610924374808178 [HD]EAQQDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQDA{M(Oxidation (M))|F}Y;[HD]EAQQGE{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQ[AG]DA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HA[AG]QDA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}QQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GH{[CP]|[EA]}QDA{M(Oxidation (M))|F}Y;[HD]EAQADGA{M(Oxidation (M))|F}Y 9.3348;8.5852;8.5852;8.483;8.101;7.7333;7.7333;7.6524;7.5861;7.5768 -;-;-;-;-;-;-;-;-;- 8274 1 2.254 154816.7 0.5899999737739563 2034 3346 5375 DOHH2_400M_050219_1,5382 DOHH2_400M_050219_1,5382,NEVDGQDYHF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5383 29.062 789.0 712020.0 25 0 52787.0 + 687 AEMSVPTRSAP 11 267 382.5267550945942 1144.5584358839826 3 382.5268432497978 MULTI CID FTMS 0 0 0 5375 93580.3359375 0.0770976965003802 -2 0.0673503875732421 8 Unmodified _AEMSVPTRSAP_ REV__ENST00000519560.5_1_5:168127611-168135003:-|nuORF 19.361941925380144 0.6323962752489956 1 AEMGKGSY 8 -1 86.61 0.0 0.0 7.5671 0.0 0.0 0.0 318.1826325083309 318.1826325083309 52.308560698021495 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 1.113982988912431 0.7302046884880937 AEMGKGSY 7.5671 - 3009 + 1 2.254 437504.0 1.0 2035 3346 5375 DOHH2_400M_050219_1,5383 DOHH2_400M_050219_1,5383,AEMSVPTRSAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5385 29.078 663.0 197490.0 25 0 11347.0 + 31393 RPAVKVPF 8 154 457.2864233393055 912.558293745411 2 457.2862731814384 MULTI CID FTMS 0 0 0 5384 74494.234375 0.1777170655061082 4 -0.3123283386230469 1 Unmodified _RPAVKVPF_ REV__ENST00000490756.1_1_16:88799161-88799326:-|nuORF 9.347437153973935 0.7675937258251505 1 V{I|L}M 3 -1 23.79 0.0 0.0 2.607 0.0 0.0 551.3558827130875 0.0 551.3558827130875 0.0 11.8004423559349 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 V{I|L}M 2.607 - 171 1 2.26 108253.8 1.0 2036 3347 5384 DOHH2_400M_050219_1,5385 DOHH2_400M_050219_1,5385,RPAVKVPF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5386 29.081 144.0 467460.0 25 0 72340.0 + 35818 SVKTHFSM 8 97 468.7337583380743 935.4529637429486 2 468.7343322634697 MULTI CID FTMS 0 0 0 5384 443341.625 1.0 0 0.0 2 Unmodified _SVKTHFSM_ ENST00000307897.9_1_15:66801186-66806347:+|nuORF 48.345845343767074 0.1470278396477103 1 [VS]KTH{M(Oxidation (M))|F}SM 8 0 + 53.638 0.0 0.0 5.7339 5.7339 88.816 0.0 0.0 0.0 38.03752331271512 13.231909543645202 13.231909543645202 11.4363034371533 0 0.7429928190999391 2.0 0.7614393726401688 0.0 + + [VS]KTH{M(Oxidation (M))|F}SM;[VS]K[PG][KC]SM;[VS]K[HA][YT]M;[VS]KV[C(Carbamidomethyl (C))Q]{[ES]|[DT]|[{I|L}C]};[VS]K[DG][KS]{[ES]|[DT]|[{I|L}C]};[HT]K{M(Oxidation (M))|F}SM[VS];[VS]{[WN]|[YH]}[KS]{[ES]|[DT]|[{I|L}C]};[HT]{M(Oxidation (M))|F}KSM[VS];[VS]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}V]DM;{[{M(Oxidation (M))|F}H]|[RQ]}TKSM[VS] 5.7339;4.5114;3.497;3.497;2.8287;2.0535;2.051;1.8784;1.8049;1.6902 +;-;-;-;-;-;-;-;-;- + 252 + 1 2.26 57083.3 1.0 2037 3347 5384 DOHH2_400M_050219_1,5386 DOHH2_400M_050219_1,5386,SVKTHFSM False True SVKTHFSM 29.080826 468.73433226347 2368954.0 5384.0 ENST00000307897.9_1_15:66801186-66806347:+|nuORF 5.690037409464519 2.0 True 8.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5387 29.083 108.0 629990.0 25 0 81109.0 37524 TLHPVWSQQ 9 100 548.282761396406 1094.550969859612 2 548.2833129763603 MULTI CID FTMS 0 0 0 5384 382007.78125 0.306697700777527 -3 0.150522232055664 3 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 16.565877749689598 0.3882643987948875 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSEPPHVP 10 9 + 47.534 0.0 0.0 4.3427 4.3427 72.546 0.0 0.0 0.0 1.1932554326627098 1.933816306581683 1.1932554326627098 1.1932554326627098 0 1.7179001828205482 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSEPPHVP;[VP]SHEPPHVP;[VP]HSEPPHVP;[{I|L}T]HPPEH[PA]P;{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH[PA]P;[{I|L}T]H[WH]H[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[MS]|[{M(Oxidation (M))|F}A]}PPHVP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VS[HV]SHVP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[{I|L}T]EH[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PE[VS]PHVP 4.3427;4.2337;4.0677;3.7077;3.2455;3.1044;2.8319;2.2416;2.143;2.0522 -;-;-;-;-;-;-;-;-;- 593 1 2.26 60747.7 1.0 2038 3347 5384 DOHH2_400M_050219_1,5387 DOHH2_400M_050219_1,5387,TLHPVWSQQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5388 29.086 142.0 438700.0 25 0 50213.0 + 45438 HLDTLTEHY 9 88 564.7219260548552 1127.4292991765103 2 564.7223998904228 MULTI CID FTMS 0 0 0 5384 306010.375 0.3381763574115577 -2 0.1046123504638671 4 Unmodified _YTDSYTDTY_ ENSG00000105058|ENST00000263384|FAM32A;nc|ENSG00000105058|Q9Y421-3|FAM32A 42.09456458481378 0.0639583784996157 1 [YT]DSY 5 4 37.747 0.0 0.0 3.3481 0.0 0.0 0.0 495.1770768466853 495.1770768466853 15.109309280316907 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.1549471895720984 0.0 + [YT]DSY 3.3481 + + 222 1 2.26 52137.0 1.0 2039 3347 5384 DOHH2_400M_050219_1,5388 DOHH2_400M_050219_1,5388,YTDSYTDTY True True HLDTLTEHY 29.086007 564.722399890423 991941.1875 5384.0 ENSG00000105058|ENST00000263384|FAM32A;;nc|ENSG00000105058|Q9Y421-3|FAM32A 9.280302047729492 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5389 29.092 348.0 355680.0 25 0 35049.0 + + -1 ASNDYTQQATQSYG 14 130 788.3320026776776 1574.649452422155 2 788.3322631716728 MULTI CID FTMS 0 0 0 5384 306376.5625 0.4196058327481251 -2 0.1046123504638671 5 Carbamidomethyl (C) _DQWHHKYDC(Carbamidomethyl (C))MR_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 12.240655878213236 0.7805268987462184 1 {[CP]|[EA]}NDYTQQA 9 -1 64.454 0.0 0.0 4.0933 0.0 0.0 0.0 551.2137635739882 551.2137635739882 25.745664326797 0.0 0.0 0.0 0 0.3252574989159953 0.0 2.4035091073498256 1.3556270500406935 {[CP]|[EA]}NDYTQQA 4.0933 - 11884 1 2.26 86935.1 1.0 2040 3347 5384 DOHH2_400M_050219_1,5389 DOHH2_400M_050219_1,5389,DQWHHKYDCMR False False ASNDYTQQATQSYG 29.09233 788.332263171673 4901495.0 5384.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 7.507284641265869 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5390 29.096 190.0 530210.0 25 0 31180.0 + 614 AEKFCKGVTY 10 108 573.2865711157465 1144.5585892982929 2 573.2872802615166 MULTI CID FTMS 0 0 0 5384 247387.015625 0.4940647395582717 -1 0.0831718444824218 6 Unmodified _AEKFCKGVTY_ REV__ENST00000461513.1_1_17:49579856-49580498:-|nuORF 16.149105407346934 0.5765757077271437 1 AEMGKYQ 7 -1 76.859 0.0 0.0 6.7152 0.0 0.0 0.0 334.1772554986938 334.1772554986938 56.41396042794099 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.5 0.3494850021680094 AEMGKYQ 6.7152 - 319 + 1 2.26 79610.2 1.0 2041 3347 5384 DOHH2_400M_050219_1,5390 DOHH2_400M_050219_1,5390,AEKFCKGVTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5391 29.11 800.0 148260.0 25 0 9615.2 + 38487 TSESSCECIF 10 149 553.2124267797653 1104.4103006263306 2 553.2120239138603 MULTI CID FTMS 0 0 0 5384 88218.09375 0.6990465731172125 -1 0.0831718444824218 7 Unmodified _TSESSCECIF_ REV__ENSG00000166147|ENST00000316623|FBN1 14.838274106304384 0.5985701837916485 1 ES 2 -1 17.563 0.0 0.0 1.5903 0.0 0.0 787.2868397882431 98.02533899478748 885.3121787830306 0.0 0.0 0.0 0.0 0 0.5 0.0 1.0 0.0 ES 1.5903 + + 355 + 1 2.26 93877.3 0.5400000214576721 2042 3347 5384 DOHH2_400M_050219_1,5391 DOHH2_400M_050219_1,5391,TSESSCECIF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5392 29.111 69.0 1337200.0 25 0 164050.0 + 33090 SESDLNHSF 9 123 518.2224933329845 1034.430433732769 2 518.2227050662041 MULTI CID FTMS 0 0 0 5384 1121723.875 1.0 0 0.0 8 Unmodified _SESDLNHSF_ ENSG00000198833|ENST00000435041|UBE2J1 71.92227651296345 0.0203558744033348 1 {[ES]|[DT]|[{I|L}C]}SD{I|L}N[HS]{M(Oxidation (M))|F} 9 0 + 50.382 0.0 0.0 4.8705 4.8705 82.252 0.0 0.0 0.0 21.752861040241555 6.884353327969009 6.884353327969009 8.888766218879965 0 0.6989700043360187 0.0 1.177825934852436 0.805462187404089 + + {[ES]|[DT]|[{I|L}C]}SD{I|L}N[HS]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}SD{I|L}N[HA]Y;{[ES]|[DT]|[{I|L}C]}SD{I|L}GG[HS]{M(Oxidation (M))|F};[HN]{I|L}SDS{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};[HN]{I|L}SSD{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};[HN]S{I|L}DS{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};[HN]S{I|L}SD{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}SD{I|L}GG[HA]Y;{[ES]|[DT]|[{I|L}C]}V[HN]S{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};[HS]N{I|L}DS{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]} 4.8705;4.0112;3.2017;2.8373;2.799;2.7608;2.7225;2.3424;2.3071;2.2085 +;-;-;-;-;-;-;-;-;- + 580 + 1 2.26 77295.3 1.0 2043 3347 5384 DOHH2_400M_050219_1,5392 DOHH2_400M_050219_1,5392,SESDLNHSF True True SESDLNHSF 29.111469 518.222705066204 5933092.5 5384.0 ENSG00000198833|ENST00000435041|UBE2J1 6.192803382873535 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5393 29.119 395.0 181840.0 25 0 16298.0 -1 0 92 619.3170250933725 618.3097486267725 1 619.3171264529228 MULTI CID FTMS 0 0 0 5384 183277.703125 0.5162937175654092 -20 0.6910877227783203 9 1 Y 1 -1 11.109 0.0 0.0 1.7967 0.0 0.0 437.2357873004037 0.0 437.2357873004037 0.0 2.018461687805644 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.7967 - 4 + 1 2.26 57499.3 1.0 2044 3347 5384 DOHH2_400M_050219_1,5393 DOHH2_400M_050219_1,5393, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5394 29.132 800.0 133090.0 25 0 20012.0 8256 EQHQGQEEGYF 11 138 676.2822075849424 1350.5498622366847 2 676.2817870974541 MULTI CID FTMS 0 0 0 5384 141763.78125 1.0 0 0.0 10 Unmodified _EQHQGQEEGYF_ ENSG00000197808|ENST00000588268|ZNF461;nc|ENSG00000197808|Q8TAF7-2|ZNF461 21.53697664764585 0.586507868110548 1 [HQ]DEAQQDA{M(Oxidation (M))|F}Y 11 9 + 113.28 0.0 0.0 8.3876 8.3876 84.875 0.0 0.0 0.0 1.989700043360188 16.575773191777927 1.989700043360188 1.989700043360188 0 1.4634679910804405 0.0 2.6535984316004217 3.1989700043360187 [HQ]DEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}HEAQQDA{M(Oxidation (M))|F}Y;[HQ]DEAQQW{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}HEAQQW{M(Oxidation (M))|F}Y;{[DA]|[EG]}GHEAQQDA{M(Oxidation (M))|F}Y;[HQ]DEAQ[AG]DA{M(Oxidation (M))|F}Y;[HQ]DEA[AG]QDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}HEA[AG]QDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}HEAQ[AG]DA{M(Oxidation (M))|F}Y;[AG]DHEAQQDA{M(Oxidation (M))|F}Y 8.3876;8.2402;8.1066;7.9593;7.7466;7.7117;7.7117;7.5643;7.5643;7.5237 -;-;-;-;-;-;-;-;-;- 12555 1 2.26 79952.9 0.6600000262260437 2045 3347 5384 DOHH2_400M_050219_1,5394 DOHH2_400M_050219_1,5394,EQHQGQEEGYF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5396 29.142 393.0 208760.0 25 0 27679.0 23338 LTCALRFPA 9 105 496.271347295996 990.528141658792 2 496.2714111208916 MULTI CID FTMS 0 0 0 5395 103043.5625 0.1386845577109494 3 -0.2424201965332031 1 Unmodified _LTCALRFPA_ ENST00000219069.5_1_16:3333425-3333644:+|nuORF 10.823927491677226 0.5436922275383211 1 {[QN]|[E{I|L}]|[KN]}KM{I|L}{I|L}[MN] 8 7 + 26.93 0.0 0.0 2.7188 2.7188 80.835 0.0 0.0 0.0 5.961248400906001 3.3547064036788754 3.3547064036788754 18.17146613611058 0 0.0 1.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}KM{I|L}{I|L}[MN];[{I|L}T][VG]M{I|L}{I|L}[MN];[{I|L}T]{[WT]|[RM]}{I|L}{I|L}[MN];[VS][{I|L}A]M{I|L}{I|L}[MN] 2.7188;0.88426;0.23025;0.016858 -;-;-;- 201 1 2.26 66940.7 1.0 2046 3348 5395 DOHH2_400M_050219_1,5396 DOHH2_400M_050219_1,5396,LTCALRFPA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5397 29.144 86.0 765390.0 25 0 92693.0 + 3396 AYSSYVHQY 9 100 559.2508174938645 1116.4870820545289 2 559.2513305544853 MULTI CID FTMS 0 0 0 5395 448627.6875 0.4320377094795535 -1 0.0699081420898437 2 Unmodified _AYSSYVHQY_ ENSG00000062725|ENST00000083182|APPBP2;ENST00000592995.1_1_17:58538022-58538124:-|nuORF 49.93300154707207 0.0405168250806675 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSYVHQY 9 0 + 71.794 0.0 0.0 6.4303 6.4303 91.138 0.0 0.0 0.0 21.88547520912806 11.452424927286842 11.452424927286842 11.452424927286842 0 0.75 2.0 0.0 0.5242275032520141 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSYVHQY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSYVHS{[CT]|[{M(Oxidation (M))|F}G]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSYVH[AG]Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSYV[DP]{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YC(Carbamidomethyl (C))]{I|L}HQY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YC(Carbamidomethyl (C))]{I|L}HS{[CT]|[{M(Oxidation (M))|F}G]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DP][WY]{M(Oxidation (M))|F}R;[YE][PG]VYSS{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YC(Carbamidomethyl (C))]{I|L}H[AG]Y;{[TV]|[{I|L}S]}[MD]VYSS{[ES]|[DT]|[{I|L}C]} 6.4303;5.4045;5.136;4.4701;3.5686;2.7619;2.6481;2.5199;2.4934;2.4741 +;-;-;-;-;-;-;-;-;- + 268 + 1 2.26 55047.7 1.0 2047 3348 5395 DOHH2_400M_050219_1,5397 DOHH2_400M_050219_1,5397,AYSSYVHQY True True AYSSYVHQY 29.143886 559.251330554485 6206868.5 5395.0 ENSG00000062725|ENST00000083182|APPBP2;;ENST00000592995.1_1_17:58538022-58538124:-|nuORF 9.482653617858888 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5398 29.149 298.0 248140.0 25 0 17073.0 + -1 HWMQTLYE 8 109 562.2485642043449 1122.4825754754895 2 562.2486450076103 MULTI CID FTMS 0 0 0 5395 195161.296875 1.0 0 0.0 3 Oxidation (M) _HWM(Oxidation (M))QTLYE_ REV__ENSG00000065150|ENST00000651721|IPO5;REV__nc|ENSG00000065150|O00410-2|IPO5;REV__nc|ENSG00000065150|O00410-3|IPO5 30.22481116460888 0.4082965392918993 1 [Y{M(Oxidation (M))|F}]{I|L}QG[HM]{NN|[MP]|[D{I|L}]|[EV]} 9 -1 + 34.431 0.0 0.0 3.0674 3.0674 68.415 0.0 0.0 0.0 4.967130586808622 0.7930960725163914 0.7930960725163914 0.7930960725163914 0 0.4247425010840047 0.0 1.3851518780601924 1.0010912013506126 [Y{M(Oxidation (M))|F}]{I|L}QG[HM]{NN|[MP]|[D{I|L}]|[EV]};[Y{M(Oxidation (M))|F}]{I|L}QGW{M(Oxidation (M))|F}Y;[Y{M(Oxidation (M))|F}]{I|L}Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}MY;[Y{M(Oxidation (M))|F}]{I|L}[AG]G[HM]{NN|[MP]|[D{I|L}]|[EV]};[Y{M(Oxidation (M))|F}]{I|L}[AG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}MY;[Y{M(Oxidation (M))|F}]{I|L}[AG]GW{M(Oxidation (M))|F}Y 3.0674;2.9967;2.8701;2.2471;2.045;1.4932 -;-;-;-;-;- 293 + 1 2.26 62421.3 1.0 2048 3348 5395 DOHH2_400M_050219_1,5398 DOHH2_400M_050219_1,5398,HWMQTLYE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5399 29.153 219.0 351180.0 25 0 20926.0 + 33092 SESELGRKW 9 106 364.5208043075753 1090.540583522926 3 364.5206786990166 MULTI CID FTMS 0 0 0 5395 182256.734375 1.0 0 0.0 4 Unmodified _SESELGRKW_ ENSG00000173436|ENST00000322753|MICOS10;ENST00000462646.5_1_1:19923518-19941047:+|nuORF;ENST00000467029.5_1_1:19923518-19943759:+|nuORF;ENST00000498067.1_1_1:19923518-19924374:+|nuORF;ENST00000498642.5_1_1:19923539-19952083:+|nuORF;ENST00000602662.1_3_1:19923518-19981524:+|nuORF;nc|ENSG00000173436|Q5TGZ0-2|MICOS10 30.63653989081413 0.1413794767160703 1 SE{I|L} 3 6 22.435 0.0 0.0 2.0572 0.0 0.0 216.07291735576263 542.2845219518099 758.3574393075726 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.0 + SE{I|L} 2.0572 + + 67 + 1 2.26 64789.6 1.0 2049 3348 5395 DOHH2_400M_050219_1,5399 DOHH2_400M_050219_1,5399,SESELGRKW False True SESELGRKW 29.153494 364.520678699017 879153.25 5395.0 ENST00000467029.5_1_1:19923518-19943759:+|nuORF;;ENSG00000173436|ENST00000322753|MICOS10;;ENST00000462646.5_1_1:19923518-19941047:+|nuORF;;ENST00000498642.5_1_1:19923539-19952083:+|nuORF;;ENST00000498067.1_1_1:19923518-19924374:+|nuORF;;ENST00000602662.1_3_1:19923518-19981524:+|nuORF;;nc|ENSG00000173436|Q5TGZ0-2|MICOS10 3.4262544314066568 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5400 29.167 800.0 144640.0 25 0 12479.0 + -1 NDMRQEYEQL 10 142 671.2904335832558 1340.5663142333117 2 671.7926513552666 MULTI CID FTMS 0 0 0 5395 101909.890625 0.4106599665540047 -2 0.1530799865722656 5 Oxidation (M) _NDM(Oxidation (M))RQEYEQL_ ENSG00000171403|ENST00000246662|KRT9;P35527 32.037481411007896 0.2488723560272515 1 [AG]{I|L}[C(Carbamidomethyl (C))M]QEYEQ{I|L} 11 -1 + 57.752 0.0 0.0 4.308 4.308 84.195 0.0 0.0 0.0 18.79426068794149 2.825160557860933 2.825160557860933 13.26606256887672 0 0.5242275032520141 1.6989700043360187 0.0 0.7059771852360797 [AG]{I|L}[C(Carbamidomethyl (C))M]QEYEQ{I|L};[AG]{I|L}[C(Carbamidomethyl (C))M]QEVT[W{M(Oxidation (M))|F}];[AG]{I|L}[C(Carbamidomethyl (C))M][AG]EYEQ{I|L};[AG]{I|L}E[CS][DN]YEQ{I|L};[Q{I|L}][C(Carbamidomethyl (C))M]QEYEQ{I|L};{[QN]|[E{I|L}]|[KN]}E{[C(Carbamidomethyl (C))E]|[WC]}EYEQ{I|L};[AG]E{I|L}[CS][DN]YEQ{I|L};[YT][HM]QEYEQ{I|L};[AG]{I|L}[C(Carbamidomethyl (C))M][AG]EVT[W{M(Oxidation (M))|F}];[Q{I|L}][C(Carbamidomethyl (C))M][AG]EYEQ{I|L} 4.308;3.3184;3.1004;2.9244;2.906;2.8299;2.6279;2.4101;2.3535;2.2224 -;-;-;-;-;-;-;-;-;- 2201 1 2.26 88183.3 0.6000000238418579 2050 3348 5395 DOHH2_400M_050219_1,5400 DOHH2_400M_050219_1,5400,NDMRQEYEQL False False NDMRQEYEQL 29.167332 671.2916 2523547.0 5395.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 6.169630527496338 2.0 True 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5401 29.175 404.0 167800.0 25 0 14601.0 + 37587 TLKAKNMEI 9 110 524.296457913978 1046.578362894756 2 524.2969848513603 MULTI CID FTMS 0 0 0 5395 107700.796875 0.7526829857427207 -1 0.0699081420898437 6 Unmodified _TLKAKNMEI_ ENSG00000084090|ENST00000337288|STARD7 27.628801355627647 0.1796483985696185 1 [{I|L}T]KA 4 5 43.812 0.0 0.0 4.1862 0.0 0.0 0.0 630.2895601861936 630.2895601861936 28.327731244245346 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 + [{I|L}T]KA 4.1862 + + 138 + 1 2.26 60144.9 1.0 2051 3348 5395 DOHH2_400M_050219_1,5401 DOHH2_400M_050219_1,5401,TLKAKNMEI False True TLKAKNMEI 29.174557 524.29698485136 611602.625 5395.0 ENSG00000084090|ENST00000337288|STARD7 3.635509808858236 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5402 29.188 800.0 190990.0 25 0 18476.0 -1 YTCETDGACM 10 132 583.6953582173237 1165.3761635014473 2 583.6953613162041 MULTI CID FTMS 0 0 0 5395 86581.1328125 0.565232339551149 -2 0.1530799865722656 7 Carbamidomethyl (C),Oxidation (M) _YTC(Carbamidomethyl (C))ETDGACM(Oxidation (M))_ ENSG00000135503|ENST00000257963|ACVR1B;nc|ENSG00000135503|P36896-2|ACVR1B;nc|ENSG00000135503|P36896-3|ACVR1B;nc|ENSG00000135503|P36896-4|ACVR1B 20.453626601364224 0.5043500229302764 1 YTD 3 -1 55.42 0.0 0.0 4.7555 0.0 0.0 0.0 783.216481422469 783.216481422469 30.91129063296272 0.0 0.0 0.0 0 0.75 1.6989700043360187 0.9247425010840048 0.0 YTD 4.7555 - 144 + 1 2.26 113957.7 0.5299999713897705 2052 3348 5395 DOHH2_400M_050219_1,5402 DOHH2_400M_050219_1,5402,YTCETDGACM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5403 29.196 430.0 181360.0 25 0 11252.0 + 20114 LKEVREWLL 9 119 395.9027989691351 0 395.9030334353447 PEAK CID FTMS 0 0 0 5395 82463.4140625 0.8640606898656379 -1 0.0699081420898437 8 Unmodified _LKEVREWLL_ REV__ENSG00000071054|ENST00000324219|MAP4K4;REV__nc|ENSG00000071054|O95819-2|MAP4K4;REV__nc|ENSG00000071054|O95819-3|MAP4K4;REV__nc|ENSG00000071054|O95819-4|MAP4K4;REV__nc|ENSG00000071054|O95819-5|MAP4K4;REV__nc|ENSG00000071054|O95819-6|MAP4K4;REV__nc|ENSG00000071054|O95819|MAP4K4 13.614867670302877 0.2708053656151125 1 H 1 -1 1.9897 0.0 0.0 0.25193 0.0 0.0 394.5945338693165 255.11448084049067 649.7090147098072 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.25193 - 5 + 1 2.26 66136.7 1.0 2053 3348 5395 DOHH2_400M_050219_1,5403 DOHH2_400M_050219_1,5403,LKEVREWLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5404 29.199 163.0 1774200.0 25 0 338050.0 16658 KELKEFQKI 9 117 388.2323131460273 1161.675110038282 3 388.2323181033134 MULTI CID FTMS 0 0 0 5395 166859.953125 1.0 0 0.0 9 Unmodified _KELKEFQKI_ ENSG00000136237|ENST00000665637|RAPGEF5;nc|ENSG00000136237|Q92565-2|RAPGEF5;nc|ENSG00000136237|Q92565|RAPGEF5 4.189502756095605 0.7684307469601125 1 {M(Oxidation (M))|F} 1 8 11.594 0.0 0.0 0.99802 0.0 0.0 996.5959302060538 0.0 996.5959302060538 0.0 0.756338376653245 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.99802 + + 52 + 1 2.26 226768.4 1.0 2054 3348 5395 DOHH2_400M_050219_1,5404 DOHH2_400M_050219_1,5404,KELKEFQKI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5405 29.206 292.0 712020.0 25 0 250860.0 -1 ITFCMLLQ 8 182 521.2569676096906 0 521.2570678591728 PEAK CID FTMS 0 0 0 5395 173743.296875 0.558179563655406 1 -0.0749969482421875 10 Carbamidomethyl (C),Oxidation (M) _ITFC(Carbamidomethyl (C))M(Oxidation (M))LLQ_ ENSG00000068097|ENST00000184956|HEATR6 13.50788311687929 0.5021269579892848 1 D 1 -1 5.4846 0.0 0.0 0.52711 0.0 0.0 840.3829252322734 82.06692682437733 922.4498520566508 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.52711 - 34 + 1 2.26 160159.1 1.0 2055 3348 5395 DOHH2_400M_050219_1,5405 DOHH2_400M_050219_1,5405,ITFCMLLQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5406 29.208 85.0 451300.0 25 0 31797.0 + 39677 VEEKKWGP 8 91 486.7623766574128 971.5102003816256 2 486.7629272341728 MULTI CID FTMS 0 0 0 5395 99423.6875 0.8301892700482226 -1 0.0699081420898437 11 Unmodified _VEEKKWGP_ REV__ENSG00000134046|ENST00000256429|MBD2;REV__nc|ENSG00000134046|Q9UBB5-3|MBD2 9.347437153973935 0.7675937258251505 1 V{M(Oxidation (M))|F} 2 -1 19.464 0.0 0.0 2.0035 0.0 0.0 707.3958032642412 0.0 707.3958032642412 0.0 9.931058577571834 0.0 0.0 0 0.0 0.0 0.0 0.0 V{M(Oxidation (M))|F} 2.0035 - 48 + 1 2.26 36119.5 1.0 2056 3348 5395 DOHH2_400M_050219_1,5406 DOHH2_400M_050219_1,5406,VEEKKWGP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5408 29.224 763.0 235880.0 25 0 53914.0 + 30542 RELWGQVQF 9 133 581.8022924125369 1161.5900318918737 2 581.8031494021416 MULTI CID FTMS 0 0 0 5407 181939.53125 1.0 0 0.0 1 Unmodified _RELWGQVQF_ REV__ENST00000532959.5_1_11:86749009-87006862:+|nuORF 22.736283301280096 0.2418982879461534 1 [VG]HR 4 -1 38.676 0.0 0.0 3.3296 0.0 0.0 0.0 709.3245333307249 709.3245333307249 16.904667190167032 0.0 0.0 0.0 0 0.5387254899964358 2.0 0.0 0.4247425010840047 [VG]HR 3.3296 - 483 + 1 2.253 138617.1 1.0 2057 3349 5407 DOHH2_400M_050219_1,5408 DOHH2_400M_050219_1,5408,RELWGQVQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5409 29.226 14.0 1311900.0 25 0 204840.0 -1 0 49 414.255182057291 413.247905590691 1 414.2584106326103 MULTI CID FTMS 0 0 0 5407 2024832.5 1.0 0 0.0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.253 20220.3 1.0 2058 3349 5407 DOHH2_400M_050219_1,5409 DOHH2_400M_050219_1,5409, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5410 29.227 79.0 233910.0 25 0 20851.0 + -1 WVLHQCLN 8 48 535.2674437126462 0 535.2670776247978 PEAK CID FTMS 0 0 0 5407 525845.4375 1.0 0 0.0 3 Carbamidomethyl (C) _WVLHQC(Carbamidomethyl (C))LN_ REV__L1MD_dup374|chr1:159061049-159061398:-|1.2573971330827678|0.0691446629960464|4.18|48.0|17|1|anti-sense 0.7936320650641473 0.5979579398327216 1 WQ 2 -1 4.068 0.0 0.0 0.38072 0.0 0.0 546.2964097868174 205.0623568170532 751.3587666038705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WQ 0.38072 - 4 + 1 2.253 22493.8 1.0 2059 3349 5407 DOHH2_400M_050219_1,5410 DOHH2_400M_050219_1,5410,WVLHQCLN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5411 29.229 72.0 241030.0 25 0 13262.0 + 23518 LTKMIFAY 8 56 493.7725494478176 985.5305459624352 2 493.7723571658134 MULTI CID FTMS 0 0 0 5407 494601.5 1.0 0 0.0 4 Unmodified _LTKMIFAY_ REV__ENSG00000144357|ENST00000272793|UBR3;REV__nc|ENSG00000144357|Q6ZT12-4|UBR3 5.760428011301431 0.7893668129297577 1 T 1 -1 3.9794 0.0 0.0 0.40378 0.0 0.0 799.3932911790351 82.06686578922108 881.4601569682562 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.40378 + + 4 + 1 2.253 20528.3 1.0 2060 3349 5407 DOHH2_400M_050219_1,5411 DOHH2_400M_050219_1,5411,LTKMIFAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5412 29.232 170.0 616470.0 25 0 91538.0 + 10414 FTATRPGVY 9 105 506.2659271959892 1010.5173014587784 2 506.2654907107353 MULTI CID FTMS 0 0 0 5407 391591.0625 0.4661945783255795 -1 0.0749969482421875 5 Unmodified _FTATRPGVY_ ENSG00000198712|ENST00000361739|MT-CO2 40.23920728925047 0.0741434193262949 1 {M(Oxidation (M))|F}TATR[DV]T 8 3 56.144 0.0 0.0 5.556 0.0 0.0 0.0 116.05099664859608 116.05099664859608 30.966657801178755 0.0 0.0 0.0 0 0.8807196863200843 0.7695510786217261 0.1505149978319906 0.0 {M(Oxidation (M))|F}TATR[DV]T 5.556 - 303 + 1 2.253 82354.1 1.0 2061 3349 5407 DOHH2_400M_050219_1,5412 DOHH2_400M_050219_1,5412,FTATRPGVY True True FTATRPGVY 29.232458 506.2668 5106351.0 5407.0 ENSG00000198712|ENST00000361739|MT-CO2 7.061195691426595 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5413 29.235 104.0 146750.0 25 0 13799.0 -1 0 45 540.2604943707796 539.2532179041796 1 540.2611572146416 MULTI CID FTMS 0 0 0 5407 375667.59375 1.0 0 0.0 6 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.253 18592.2 1.0 2062 3349 5407 DOHH2_400M_050219_1,5413 DOHH2_400M_050219_1,5413, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5414 29.247 721.0 193370.0 25 0 42857.0 + 32675 FSDPSQQPPSY 11 115 627.2778441026109 1252.5411352720216 2 627.2784301638603 MULTI CID FTMS 0 0 0 5407 97674.2421875 1.0 0 0.0 7 Unmodified _SDFINYSFNF_ ENSG00000071626|ENST00000233078|DAZAP1;ENST00000589874.2_1_19:1434656-1434908:+|nuORF 13.90604991867851 0.6142120002215601 1 SPPSY 5 8 30.394 0.0 0.0 2.4266 0.0 0.0 703.2840684769029 0.0 703.2840684769029 0.0 9.040137987441462 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 SPPSY 2.4266 - 426 + 1 2.253 106260.9 1.0 2063 3349 5407 DOHH2_400M_050219_1,5414 DOHH2_400M_050219_1,5414,SDFINYSFNF False False FSDPSQQPPSY 29.247217 626.7774 1347485.375 5407.0 ENSG00000071626|ENST00000233078|DAZAP1;;ENST00000589874.2_1_19:1434656-1434908:+|nuORF 6.165379206339519 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5415 29.26 748.0 157700.0 25 0 19734.0 + 14285 IEKEIQQKW 9 132 601.3323500855454 1200.650147237891 2 601.3317138552666 MULTI CID FTMS 0 0 0 5407 90210.578125 1.0 0 0.0 8 Unmodified _IEKEIQQKW_ ENSG00000133706|ENST00000394434|LARS1 71.70789743142352 0.0204387454931768 1 {I|L}EKE[Q{I|L}]QKW 9 0 + 88.122 0.0 0.0 7.3395 7.3395 91.595 0.0 0.0 0.0 59.22100125586394 12.98332479720628 12.98332479720628 9.208187539523747 0 1.892159058960253 2.0 0.9247425010840048 0.2742275032520141 + + {I|L}EKE[Q{I|L}]QKW;{I|L}EKE[Q{I|L}][AG]KW;{I|L}EK[{I|L}A]WQKW;{[QN]|[E{I|L}]|[KN]}KE[RV]EW{I|L};{I|L}EK[{I|L}A]{[DA]|[EG]}QKW;{I|L}EK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HT]KW;{I|L}EK[{I|L}A]W[AG]KW;{I|L}ERRWQKW;{[QN]|[E{I|L}]|[KN]}KE[RV]E{[DA]|[EG]}{I|L};{[QN]|[E{I|L}]|[KN]}KQ[KQ]EW{I|L} 7.3395;6.5726;5.9165;5.7155;5.5033;5.2385;5.1496;5.0232;4.9486;4.9443 +;-;-;-;-;-;-;-;-;- + 2097 + 1 2.253 87065.8 1.0 2064 3349 5407 DOHH2_400M_050219_1,5415 DOHH2_400M_050219_1,5415,IEKEIQQKW True True IEKEIQQKW 29.260185 601.331713855267 556408.8125 5407.0 ENSG00000133706|ENST00000394434|LARS1 2.828804930051168 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5416 29.274 800.0 286440.0 25 0 18792.0 + 32773 SEDVIARTY 9 192 527.2638627137252 0 527.2639648318291 PEAK CID FTMS 0 0 0 5407 86935.2734375 0.400242820676337 -1 0.0749969482421875 9 Unmodified _SEDVIARTY_ ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-2|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2 80.6760300276096 0.0137826516712776 1 DV{I|L}ART 6 3 52.903 0.0 0.0 5.0263 0.0 0.0 216.07305068338297 178.05137048892814 394.1244211723112 0.0 0.0 0.0 0.0 0 2.0669015600442577 0.0 0.6694451763165201 0.3054621874040891 + DV{I|L}ART 5.0263 + + 298 + 1 2.253 177526.6 0.9700000286102296 2065 3349 5407 DOHH2_400M_050219_1,5416 DOHH2_400M_050219_1,5416,SEDVIARTY True True SEDVIARTY 29.274016 527.263964831829 945493.875 5407.0 nc|ENSG00000024048|Q8IWV8|UBR2;;nc|ENSG00000024048|Q8IWV8-2|UBR2;;ENSG00000024048|ENST00000372901|UBR2 5.457140763600667 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5417 29.275 25.0 869690.0 25 0 38925.0 + 41062 VMNKLLGPY 9 59 517.7870486134449 0 517.7868530154228 PEAK CID FTMS 0 0 0 5407 835188.375 1.0 0 0.0 10 Unmodified _VMNKLLGPY_ REV__ENSG00000158169|ENST00000289081|FANCC 9.347437153973935 0.3197567915069932 1 P 1 -1 6.9897 0.0 0.0 0.67627 0.0 0.0 755.4324823813835 178.05144678287346 933.4839291642568 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.67627 + + 2 + 1 2.253 27138.0 1.0 2066 3349 5407 DOHH2_400M_050219_1,5417 DOHH2_400M_050219_1,5417,VMNKLLGPY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5418 29.287 608.0 376120.0 25 0 41752.0 + 33031 SEPESIRKW 9 150 566.2929156562953 1130.5712783793906 2 566.2933227419853 MULTI CID FTMS 0 0 0 5407 219904.484375 0.9243921419337566 -1 0.0749969482421875 11 Unmodified _SEPESIRKW_ ENSG00000122705|ENST00000345519|CLTA;nc|ENSG00000122705|P09496-3|CLTA;nc|ENSG00000122705|P09496-4|CLTA;nc|ENSG00000122705|P09496|CLTA 46.0223103267499 0.0490911897871712 1 {[ES]|[DT]|[{I|L}C]}PES{I|L}RKW 9 0 {[ES]|[DT]|[{I|L}C]} + + 40.244 4.1504 1.9208 3.5596 3.5596 51.857 0.0 0.0 0.0 0.0 12.407585181787084 0.0 0.0 0 1.0228787452803376 0.0 0.3807196863200844 0.3054621874040891 + + {[ES]|[DT]|[{I|L}C]}PES{I|L}RKW 3.5596 + + 761 + 1 2.253 173809.7 1.0 2067 3349 5407 DOHH2_400M_050219_1,5418 DOHH2_400M_050219_1,5418,SEPESIRKW True True SEPESIRKW 29.287 566.293322741985 2050345.625 5407.0 ENSG00000122705|ENST00000345519|CLTA;;nc|ENSG00000122705|P09496|CLTA;;nc|ENSG00000122705|P09496-3|CLTA;;nc|ENSG00000122705|P09496-4|CLTA 7.099895477294922 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5419 29.291 192.0 340870.0 25 0 34522.0 + 5163 DIKVKEEQL 9 90 551.3111162222053 1100.6076795112106 2 551.3115722537041 MULTI CID FTMS 0 0 0 5407 186419.453125 0.5206876413132584 -1 0.0749969482421875 12 Unmodified _DIKVKEEQL_ ENSG00000106443|ENST00000634607|PHF14;ENST00000490957.5_1_7:11013950-11101713:+|nuORF;nc|ENSG00000106443|O94880-1|PHF14 60.07390631473393 0.0260411565414776 1 {NN|[MP]|[D{I|L}]|[EV]}KV{[MS]|[{M(Oxidation (M))|F}A]}APQ{I|L} 10 4 + 73.638 0.0 0.0 6.6907 6.6907 92.159 0.0 0.0 0.0 45.59054065780998 12.64136888583522 12.64136888583522 12.7962253513872 0 0.8807196863200843 2.0 0.3494850021680094 1.274227503252014 {NN|[MP]|[D{I|L}]|[EV]}KV{[MS]|[{M(Oxidation (M))|F}A]}APQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}KV{I|L}C[KP]W;{NN|[MP]|[D{I|L}]|[EV]}KV{[MS]|[{M(Oxidation (M))|F}A]}AP[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}KV{[WT]|[RM]}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}KA{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}KANWKN{I|L};{NN|[MP]|[D{I|L}]|[EV]}KA[PA]{M(Oxidation (M))|F}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}KAGGWKN{I|L};{NN|[MP]|[D{I|L}]|[EV]}KAT[QA]KN{I|L};{NN|[MP]|[D{I|L}]|[EV]}KAT[DV]{I|L}N{I|L} 6.6907;5.528;5.0862;4.9609;4.7582;4.4775;3.8704;3.6409;3.4393;3.3953 -;-;-;-;-;-;-;-;-;- 1084 + 1 2.253 57221.5 1.0 2068 3349 5407 DOHH2_400M_050219_1,5419 DOHH2_400M_050219_1,5419,DIKVKEEQL True True DIKVKEEQL 29.290693 551.311572253704 2052789.25 5407.0 ENST00000490957.5_1_7:11013950-11101713:+|nuORF;;ENSG00000106443|ENST00000634607|PHF14;;nc|ENSG00000106443|O94880-1|PHF14 2.375286102294922 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5420 29.294 147.0 3169200.0 25 0 2480500.0 -1 0 52 481.2618343068134 480.2545578402134 1 481.2597228884697 MULTI CID FTMS 0 0 0 5407 162942.3125 0.0492828209734837 -1 0.0749969482421875 13 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.253 365684.2 1.0 2069 3349 5407 DOHH2_400M_050219_1,5420 DOHH2_400M_050219_1,5420, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5422 29.298 69.0 554960.0 25 0 97785.0 + -1 PNEKQCHPCFY 11 66 711.8000159536352 1421.5854789740704 2 711.7999755740166 MULTI CID FTMS 0 0 0 5421 640924.625 0.2933266293527485 2 -0.1966629028320312 1 Carbamidomethyl (C) _PNEKQC(Carbamidomethyl (C))HPCFY_ REV__ENSG00000109674|ENST00000264596|NEIL3 7.608950283845883 0.8392484121837455 1 [QA]DHEAQQDA{M(Oxidation (M))|F}Y 12 -1 + 83.114 0.0 0.0 5.8466 5.8466 84.71 0.0 0.0 0.0 3.9524249272868417 76.66054693457546 3.9524249272868417 6.989700043360188 0 1.0 0.0 0.805462187404089 0.4247425010840047 [QA]DHEAQQDA{M(Oxidation (M))|F}Y;[HD][QA]EAQQDA{M(Oxidation (M))|F}Y;[QA]DHEA[AG]QDA{M(Oxidation (M))|F}Y;[QA]DHEAQ[AG]DA{M(Oxidation (M))|F}Y;[HD]{[CP]|[EA]}QAQQDA{M(Oxidation (M))|F}Y;[HD]{[CP]|[EA]}QAQQW{M(Oxidation (M))|F}Y;[QA]E[HD]AQQDA{M(Oxidation (M))|F}Y;[HD][QA]EAQ[AG]DA{M(Oxidation (M))|F}Y;[HD][QA]EA[AG]QDA{M(Oxidation (M))|F}Y;[QA]DHEA[AG][AG]DA{M(Oxidation (M))|F}Y 5.8466;5.3549;5.2066;5.2066;4.9314;4.8019;4.7233;4.7149;4.7149;4.5684 -;-;-;-;-;-;-;-;-;- 560 1 2.253 32956.6 1.0 2070 3350 5421 DOHH2_400M_050219_1,5422 DOHH2_400M_050219_1,5422,PNEKQCHPCFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5423 29.301 156.0 446440.0 25 0 29723.0 + 8014 EMQKVEEPR 9 85 382.5267550945942 1144.5584358839826 3 382.5265991091728 MULTI CID FTMS 0 0 0 5421 303467.21875 0.2500164515826062 2 -0.1966629028320312 2 Unmodified _EMQKVEEPR_ REV__ENSG00000137656|ENST00000260210|BUD13;REV__nc|ENSG00000137656|Q9BRD0-2|BUD13 10.823927491677226 0.5436922275383211 1 [KG][W{I|L}]SGKGM 9 -1 34.504 0.0 0.0 3.0146 0.0 0.0 0.0 197.05326324490505 197.05326324490505 13.53462798369997 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.5356668758921829 [KG][W{I|L}]SGKGM 3.0146 - 190 1 2.253 63180.4 1.0 2071 3350 5421 DOHH2_400M_050219_1,5423 DOHH2_400M_050219_1,5423,EMQKVEEPR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5424 29.303 84.0 883630.0 25 0 84649.0 + 6992 EEIPVSSHY 9 83 530.7506262716801 1059.48669961016 2 530.7510253787041 MULTI CID FTMS 0 0 0 5421 767330.625 0.4042165936062788 -1 0.0858364105224609 3 Unmodified _EEIPVSSHY_ ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 39.957323273325 0.0756908302845263 1 EE{I|L}PVSSHY 9 0 + 71.687 0.0 0.0 6.7662 6.7662 82.194 0.0 0.0 0.0 22.376430167995885 2.138798199450818 2.138798199450818 2.138798199450818 0 0.5 1.5228787452803376 0.4247425010840047 0.0 + + EE{I|L}PVSSHY;EE{I|L}PVSSWN;[VP]E{[YC]|[HE]}P{I|L}[HC];EE{I|L}P[HT][TA]Y;[DP]{I|L}{[YC]|[HE]}P{I|L}[HC];[HS]S[{I|L}T]Y{I|L}[HC] 6.7662;6.5643;4.0433;3.1352;2.4892;1.8203 +;-;-;-;-;- + 199 + 1 2.253 61035.1 1.0 2072 3350 5421 DOHH2_400M_050219_1,5424 DOHH2_400M_050219_1,5424,EEIPVSSHY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5425 29.306 123.0 678250.0 25 0 65473.0 + 10420 FTDEEGYGRY 10 93 618.7619359837751 1235.50931903435 2 618.7622558474541 MULTI CID FTMS 0 0 0 5421 549164.9375 0.7281678446531331 -1 0.0858364105224609 4 Unmodified _FTDEEGYGRY_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000446317.1_1_20:3471092-3471287:-|nuORF;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 51.76506608216692 0.0697913821149828 1 {M(Oxidation (M))|F}TDEEYG{[NV]|[RG]}Y 10 2 + 75.967 0.0 0.0 6.1486 6.1486 60.859 0.0 0.0 0.0 64.9979065802868 1.638568026386693 1.638568026386693 0.0 0 1.1989700043360187 0.0 1.1861818737241734 0.0 {M(Oxidation (M))|F}TDEEYG{[NV]|[RG]}Y;{M(Oxidation (M))|F}TDEEGY{[NV]|[RG]}Y;{M(Oxidation (M))|F}TDEEY[RN]Y;{M(Oxidation (M))|F}TDEWY{[NV]|[RG]}Y;{M(Oxidation (M))|F}TDEEY[KC]{[DS]|[MA]|[CV]|TT};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E[K{I|L}]EEDTE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E[K{I|L}][HC]DT{M(Oxidation (M))|F};{[DA]|[EG]}[HK]Y[HC]DT{M(Oxidation (M))|F} 6.1486;6.1486;5.6199;5.6199;5.0064;4.8999;0.6794;0.67684 -;+;-;-;-;-;-;- + 220 + 1 2.253 63871.6 1.0 2073 3350 5421 DOHH2_400M_050219_1,5425 DOHH2_400M_050219_1,5425,FTDEEGYGRY True True FTDEEGYGRY 29.305527 618.762255847454 4083479.0 5421.0 ENST00000446317.1_1_20:3471092-3471287:-|nuORF;;ENST00000470585.5_1_1:38445118-38455637:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 8.523417631785074 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5426 29.308 132.0 512810.0 25 0 82472.0 + 45548 YVDDPYQKY 9 91 595.7721245195012 1189.5296961058025 2 595.7729369997978 MULTI CID FTMS 0 0 0 5421 433835.90625 0.4774117864072701 -1 0.0858364105224609 5 Unmodified _YVDDPYQKY_ ENSG00000132313|ENST00000337109|MRPL35 53.832793166522166 0.0319663582346103 1 YVDDPYQKY 9 0 + 91.31 0.0 0.0 7.6762 7.6762 92.131 0.0 0.0 0.0 70.16380008988754 13.46787486224656 13.46787486224656 9.208187539523747 0 0.75 2.0 0.0 1.1237125054200234 + + YVDDPYQKY;YVDDPY[AG]KY;YVDDP[WH]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};YVDDP[KP]D{[QN]|[E{I|L}]|[KN]};YV[C(Carbamidomethyl (C))S]{[QD]|[EN]|[WG]|[KD]|[RS]}QKY;YV[C(Carbamidomethyl (C))S]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}K{[WS]|[C(Carbamidomethyl (C)){I|L}]} 7.6762;6.9021;4.9519;4.9097;4.7337;2.6748 +;-;-;-;-;- + 217 + 1 2.253 55212.0 1.0 2074 3350 5421 DOHH2_400M_050219_1,5426 DOHH2_400M_050219_1,5426,YVDDPYQKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5427 29.313 239.0 409100.0 25 0 24811.0 + 7285 EEVDQVARAY 10 117 590.2850328417989 1178.5555127503976 2 590.2848388552666 MULTI CID FTMS 0 0 0 5421 361255.8125 1.0 0 0.0 6 Unmodified _EEVDQVARAY_ ENSG00000133028|ENST00000255390|SCO1 66.45667989310934 0.0196491505995134 1 EEVDQVARAY 10 0 + 85.411 0.0 0.0 7.2471 7.2471 90.29 0.0 0.0 0.0 63.13100339696028 13.239087409443188 13.239087409443188 9.164539485499247 0 0.8807196863200843 1.5228787452803376 0.3494850021680094 0.8494850021680094 + + EEVDQVARAY;EEVD[AG]VARAY;[DV]P[PA]VQDV[HC];[DV][HK]VQDV[HC];EEVDQV[RH][PA];[DP]V[PA]VQDV[HC];{[TV]|[{I|L}S]}[HA]AVQDV[HC];[DV][HK]V[AG]DV[HC];EEVD[AG]V[RH][PA];[DV]P[PA]V[AG]DV[HC] 7.2471;6.4695;4.9173;4.7642;4.6966;4.2182;4.1193;3.9866;3.919;3.422 +;-;-;-;-;-;-;-;-;- + 413 + 1 2.253 78667.9 1.0 2075 3350 5421 DOHH2_400M_050219_1,5427 DOHH2_400M_050219_1,5427,EEVDQVARAY True True EEVDQVARAY 29.312712 590.284838855267 1409056.25 5421.0 ENSG00000133028|ENST00000255390|SCO1 7.865682919820149 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5428 29.317 221.0 326600.0 25 0 42937.0 -1 SLYSQDNM 8 99 487.20058608519184 972.3866192371836 2 487.2003967165947 MULTI CID FTMS 0 0 0 5421 335349.28125 0.7055509261822205 -1 0.0858364105224609 7 Oxidation (M) _SLYSQDNM(Oxidation (M))_ ENST00000564397.5_1_16:5077177-5078281:-|nuORF 8.593279151180031 0.7721714526254883 1 Y{I|L} 2 -1 19.464 0.0 0.0 2.0017 0.0 0.0 0.0 693.2186397372453 693.2186397372453 5.969100130080562 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 2.0017 - 37 + 1 2.253 58798.2 1.0 2076 3350 5421 DOHH2_400M_050219_1,5428 DOHH2_400M_050219_1,5428,SLYSQDNM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5429 29.32 137.0 507590.0 25 0 48628.0 13086 HEGFHFPYDY 10 83 437.8536320639973 1310.539066792192 3 437.8535949587822 MULTI CID FTMS 0 0 0 5421 319389.40625 0.6692551441102605 -1 0.0858364105224609 8 Unmodified _HEGFHFPYDY_ ENSG00000198018|ENST00000370489|ENTPD7 10.073929032068715 0.6785112666868882 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}H 3 8 29.922 0.0 0.0 2.2831 0.0 0.0 0.0 876.2977999322874 876.2977999322874 7.483105537896009 0.0 0.0 0.0 0 0.5484550065040282 1.3979400086720375 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}H 2.2831 - 183 + 1 2.253 64700.9 1.0 2077 3350 5421 DOHH2_400M_050219_1,5429 DOHH2_400M_050219_1,5429,HEGFHFPYDY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5430 29.333 800.0 151740.0 25 0 23012.0 + 11048 GDEMYIDAYF 10 126 612.2518831370774 1222.4892133409546 2 612.2523681521416 MULTI CID FTMS 0 0 0 5421 253636.5625 0.430688568308094 1 -0.0815868377685546 9 Unmodified _GDEMYIDAYF_ REV__ENSG00000092964|ENST00000521913|DPYSL2;REV__ENSG00000113657|ENST00000343218|DPYSL3;REV__ENST00000519672.1_1_5:146788331-146833150:-|nuORF;REV__nc|ENSG00000092964|Q16555|DPYSL2;REV__nc|ENSG00000113657|Q14195|DPYSL3 20.453626601364224 0.5043500229302764 1 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 -1 + 99.39 0.0 0.0 8.1302 8.1302 92.197 0.0 0.0 0.0 7.269987279362624 88.56457452544505 7.269987279362624 9.164539485499262 0 1.0 0.0 1.6382104921644451 1.1861818737241734 [HD]EAQQDA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;[HD]EAQ{[DA]|[EG]}GA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQDA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]DA{M(Oxidation (M))|F}Y;[C(Carbamidomethyl (C))H][QP]WDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}AA[HD]QDA{M(Oxidation (M))|F}Y;[HD]EAQ{[DA]|[EG]}Q{M(Oxidation (M))|F}Y;[AG]AE[HD]QDA{M(Oxidation (M))|F}Y 8.1302;7.3805;7.3805;6.2907;5.796;5.6635;5.2739;5.1544;5.1393;5.0857 -;-;-;-;-;-;-;-;-;- 2070 1 2.253 93351.1 0.9700000286102296 2078 3350 5421 DOHH2_400M_050219_1,5430 DOHH2_400M_050219_1,5430,GDEMYIDAYF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5431 29.347 800.0 188520.0 25 0 18277.0 6151 DSYVNADHDLY 11 111 656.276628632315 1310.53870433143 2 656.2782470583916 MULTI CID FTMS 0 0 0 5421 108419.2109375 1.0 0 0.0 10 Unmodified _DSYVNADHDLY_ ENSG00000046647|ENST00000680255|GEMIN8 16.149105407346934 0.6992268271266642 1 EH{I|L}Y 4 8 51.23 0.0 0.0 3.9091 0.0 0.0 750.2759876935562 0.0 750.2759876935562 0.0 28.55388478663194 0.0 0.0 0 1.3494850021680094 0.0 0.7302046884880937 0.0 EH{I|L}Y 3.9091 - 146 1 2.253 111607.3 0.6499999761581421 2079 3350 5421 DOHH2_400M_050219_1,5431 DOHH2_400M_050219_1,5431,DSYVNADHDLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5432 29.35 112.0 383730.0 25 0 43235.0 -1 SQCFRRPRRAD 11 59 483.5819417004665 1447.7239957015995 3 483.5822326540947 MULTI CID FTMS 0 0 0 5421 87721.2734375 1.0 0 0.0 11 Carbamidomethyl (C) _SQC(Carbamidomethyl (C))FRRPRRAD_ AluSx_dup100421|chr17:75147717-75148024:+|1.4193565742842928|0.0059828671783624|7.89|48.0|5|2|sense 2.2527281973983926 0.8645194170429107 1 Y 1 -1 11.109 0.0 0.0 0.76736 0.0 0.0 1266.6495613527698 0.0 1266.6495613527698 0.0 0.1401436180012183 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.76736 - 25 + 1 2.253 46381.4 1.0 2080 3350 5421 DOHH2_400M_050219_1,5432 DOHH2_400M_050219_1,5432,SQCFRRPRRAD False False False False ERV PXD020620_cell_line DOHH2_400M_050219_1 5433 29.356 340.0 329060.0 25 0 9269.6 33503 SIIYIIVLY 9 167 366.2275391529371 0 366.2276183962822 PEAK CID FTMS 0 0 0 5421 211575.28125 1.0 0 0.0 12 Unmodified _SIIYIIVLY_ ENST00000541160.1_19:20451721-20519773:-|nuORF 4.75600775471527 0.3444685223463735 1 KEH 3 9 10.974 0.0 0.0 1.5024 0.0 0.0 126.11509920255544 207.1149080865844 333.23000728913985 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.5 0.0 KEH 1.5024 - 22 + 1 2.253 91441.9 1.0 2081 3350 5421 DOHH2_400M_050219_1,5433 DOHH2_400M_050219_1,5433,SIIYIIVLY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5434 29.362 246.0 385400.0 25 0 30805.0 + -1 ISDPGVQGY 9 125 468.2262947730084 467.2190183064084 1 468.2255737185478 MULTI CID FTMS 0 0 0 5421 161354.90625 0.5437991905187695 -1 0.0858364105224609 13 ENST00000374647.9_1_9:111693343-111696326:-|nuORF 1 QGY 3 -1 25.956 0.0 0.0 5.5553 0.0 0.0 101.06439902105524 0.0 101.06439902105524 0.0 11.944733563261384 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 QGY 5.5553 - 105 + 1 2.253 77637.4 1.0 2082 3350 5421 DOHH2_400M_050219_1,5434 DOHH2_400M_050219_1,5434, False False ISDPGVQGY 29.36156 468.225573718548 1253011.375 5421.0 ENST00000374647.9_1_9:111693343-111696326:-|nuORF 4.724379221598308 2.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 5435 29.375 800.0 186790.0 25 0 12198.0 + -1 EAEGGPCEAE 10 171 524.6979117376287 1047.381270542057 2 524.6990234255791 MULTI CID FTMS 0 0 0 5421 149918.046875 0.854389823641245 -1 0.0858364105224609 14 Carbamidomethyl (C) _EAEGGPC(Carbamidomethyl (C))EAE_ REV__nc|ENSG00000100146|P56693-2|SOX10;REV__nc|ENSG00000100146|P56693|SOX10 13.90604991867851 0.6142120002215601 1 AEE 3 -1 25.93 0.0 0.0 2.4757 0.0 0.0 700.2357091840295 0.0 700.2357091840295 0.0 2.6291065739524555 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 AEE 2.4757 - 893 1 2.253 118676.9 0.6600000262260437 2083 3350 5421 DOHH2_400M_050219_1,5435 DOHH2_400M_050219_1,5435,EAEGGPCEAE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5437 29.38 61.0 1071400.0 25 0 115370.0 37525 TLHPVWSQQ 9 93 548.282761396406 1094.550969859612 2 548.2828857302666 MULTI CID FTMS 0 0 0 5436 884548.25 0.7101659385420835 1 -0.1150760650634765 1 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 11.517880264261096 0.5249077435482886 1 QHEPPH[VP] 8 8 50.967 0.0 0.0 4.6564 0.0 0.0 155.09520156074376 0.0 155.09520156074376 0.0 36.60850666067283 0.0 0.0 0 2.4247425010840047 0.0 0.0 0.0 QHEPPH[VP] 4.6564 - 346 1 2.238 54930.2 1.0 2084 3351 5436 DOHH2_400M_050219_1,5437 DOHH2_400M_050219_1,5437,TLHPVWSQQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5438 29.388 444.0 245750.0 25 0 18273.0 + 45439 YTDSYTDTY 9 132 564.7219260548552 1127.4292991765103 2 564.7218505740166 MULTI CID FTMS 0 0 0 5436 256042.953125 0.2829566586711667 2 -0.1254444122314453 2 Unmodified _YTDSYTDTY_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON 36.04419817259434 0.0971720506436186 1 [YT]DTMT 6 4 43.575 0.0 0.0 3.865 0.0 0.0 0.0 412.13442820121935 412.13442820121935 23.665827977365623 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8169015600442578 0.0 [YT]DTMT 3.865 - 390 1 2.238 86781.6 1.0 2085 3351 5436 DOHH2_400M_050219_1,5438 DOHH2_400M_050219_1,5438,YTDSYTDTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5439 29.39 98.0 615200.0 25 0 76536.0 + 6152 DSYWRETIC 9 83 586.756936008985 1171.49931908477 2 586.7578002810478 MULTI CID FTMS 0 0 0 5436 676266.625 0.6383699523700407 -1 0.0815868377685546 3 Unmodified _DSYWRETIC_ ENST00000355557.6_1_12:133682357-133682435:+|nuORF 45.69961567697781 0.0497987121815769 1 {[DS]|[MA]|[CV]|TT}YVSD{[WS]|[C(Carbamidomethyl (C)){I|L}]}T{I|L} 10 6 + 59.624 0.0 0.0 5.0895 5.0895 77.788 0.0 0.0 0.0 46.43634753457331 10.0 10.0 3.0102999566398125 0 1.6989700043360187 0.0 0.9269359821608808 0.0 {[DS]|[MA]|[CV]|TT}YVSD{[WS]|[C(Carbamidomethyl (C)){I|L}]}T{I|L};{[DS]|[MA]|[CV]|TT}YWDS[VS]T{I|L};{[DS]|[MA]|[CV]|TT}YWD{[WS]|[C(Carbamidomethyl (C)){I|L}]}T{I|L};{[DS]|[MA]|[CV]|TT}YWRM[WE];{[DS]|[MA]|[CV]|TT}YVRWD[MT];{[DS]|[MA]|[CV]|TT}Y[RV]SM[WE];{[DS]|[MA]|[CV]|TT}YV{[C(Carbamidomethyl (C))E]|[WC]}[VS]T{I|L};[W{M(Oxidation (M))|F}]MSD{[WS]|[C(Carbamidomethyl (C)){I|L}]}T{I|L};{[DS]|[MA]|[CV]|TT}YVSD[YQ][VP];{[DS]|[MA]|[CV]|TT}YWRVD[MT] 5.0895;4.8326;4.532;3.9062;3.7222;3.5548;3.3939;3.2515;3.1864;3.1537 -;-;-;-;-;-;-;-;-;- 523 + 1 2.238 48986.3 1.0 2086 3351 5436 DOHH2_400M_050219_1,5439 DOHH2_400M_050219_1,5439,DSYWRETIC True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5440 29.392 94.0 642710.0 25 0 44960.0 + 25499 NELVSTHGY 9 89 510.24309254950737 1018.4716321658148 2 510.2432433962822 MULTI CID FTMS 0 0 0 5436 632382.875 0.4866386223690916 -1 0.0815868377685546 4 Unmodified _NELVSTHGY_ ENSG00000105325|ENST00000441788|FZR1;ENST00000586212.1_1_19:3532513-3533660:+|nuORF;nc|ENSG00000105325|Q9UM11-3|FZR1;nc|ENSG00000105325|Q9UM11|FZR1 61.357469665136826 0.0253304979873734 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSTH[YG] 9 0 + 42.898 0.0 0.0 4.212 4.212 77.788 0.0 0.0 0.0 16.529674602085436 2.632192780232785 2.632192780232785 6.020599913279618 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSTH[YG];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSHT[YG];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSHS{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 4.212;3.6208;3.4479 +;-;- + 235 + 1 2.238 51766.2 1.0 2087 3351 5436 DOHH2_400M_050219_1,5440 DOHH2_400M_050219_1,5440,NELVSTHGY True True NELVSTHGY 29.39178 510.243243396282 13549424.0 5436.0 ENST00000586212.1_1_19:3532513-3533660:+|nuORF;;nc|ENSG00000105325|Q9UM11|FZR1;;ENSG00000105325|ENST00000441788|FZR1;;nc|ENSG00000105325|Q9UM11-3|FZR1 7.971964518229167 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5441 29.397 308.0 314580.0 25 0 48900.0 + 7400 EGIVKQDSL 9 127 494.7687352655785 987.5229175979572 2 494.7689391970634 MULTI CID FTMS 0 0 0 5436 293385.125 0.7650751186893057 -3 0.2424201965332031 5 Unmodified _EGIVKQDSL_ ENSG00000092201|ENST00000216297|SUPT16H 58.6788170122104 0.0268135626297836 1 {[DA]|[EG]}GKS{I|L}V 7 5 28.191 0.0 0.0 2.8547 0.0 0.0 0.0 314.1347699751633 314.1347699751633 8.850000497954014 0.0 0.0 0.0 0 0.0 0.5376020021010439 0.9916440611282626 0.25 {[DA]|[EG]}GKS{I|L}V 2.8547 - 809 1 2.238 79412.2 1.0 2088 3351 5436 DOHH2_400M_050219_1,5441 DOHH2_400M_050219_1,5441,EGIVKQDSL True True EGIVKQDSL 29.397397 494.768939197063 2119062.0 5436.0 ENSG00000092201|ENST00000216297|SUPT16H 5.275668621063232 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5442 29.41 754.0 211080.0 25 0 32958.0 + 32852 SEGYPGQRYY 10 116 610.2728577274205 1218.531162521641 2 610.2725707888603 MULTI CID FTMS 0 0 0 5436 223593.125 0.5813531925114024 -2 0.1674232482910156 6 Unmodified _SEGYPGQRYY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 53.832793166522166 0.0576554960245129 1 {[ES]|[DT]|[{I|L}C]}GYPGQ[YR]Y 10 0 + 44.135 0.0 0.0 3.622 3.622 74.485 0.0 0.0 0.0 30.63994702129584 0.6138084506981301 0.6138084506981301 4.262479696439343 0 1.305462187404089 0.0 0.0 0.4247425010840047 + + {[ES]|[DT]|[{I|L}C]}GYPGQ[YR]Y;{[ES]|[DT]|[{I|L}C]}GYPGQ[RN][DP];{[ES]|[DT]|[{I|L}C]}GYPGQ[YV]GY;{[ES]|[DT]|[{I|L}C]}GYPGQ[HV][{M(Oxidation (M))|F}V];{[ES]|[DT]|[{I|L}C]}GYPG[AG][YR]Y;{[ES]|[DT]|[{I|L}C]}GYPG[AG][RN][DP];{[ES]|[DT]|[{I|L}C]}GYPG[AG][YV]GY;{[ES]|[DT]|[{I|L}C]}GYPG[AG][HV][{M(Oxidation (M))|F}V];{[ES]|[DT]|[{I|L}C]}G[WM]Q[YR]Y;{[ES]|[DT]|[{I|L}C]}[WM]GQ[YR]Y 3.622;3.2722;3.1734;2.9349;2.8699;2.523;2.0757;1.8371;1.1949;0.78458 +;-;-;-;-;-;-;-;-;- + 599 + 1 2.238 116703.0 1.0 2089 3351 5436 DOHH2_400M_050219_1,5442 DOHH2_400M_050219_1,5442,SEGYPGQRYY True True SEGYPGQRYY 29.410466 610.27257078886 5214835.5 5436.0 ENSG00000176974|ENST00000316694|SHMT1;;nc|ENSG00000176974|P34896-3|SHMT1;;nc|ENSG00000176974|P34896-2|SHMT1;;ENST00000579558.5_1_17:18243959-18259295:-|nuORF 8.186168352762857 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5443 29.424 800.0 57097.0 25 0 6189.3 + -1 YSYMRDYYDRQ 11 84 788.3320026776776 1574.649452422155 2 788.8330566287041 MULTI CID FTMS 0 0 0 5436 163299.40625 0.2642002861438641 2 -0.1254444122314453 7 Oxidation (M) _YSYM(Oxidation (M))RDYYDRQ_ REV__ENSG00000092199|ENST00000553300|HNRNPC;REV__ENST00000556181.1_1_14:58988169-58988316:+|nuORF;REV__nc|ENSG00000092199|P07910-3|HNRNPC;REV__nc|ENSG00000092199|P07910-4|HNRNPC;REV__nc|ENSG00000092199|P07910|HNRNPC 1.3295316138638542 0.8688751186870782 1 [NS]D 3 -1 9.2255 0.0 0.0 0.58588 0.0 0.0 0.0 1255.5236033833455 1255.5236033833455 2.235834254131108 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.3494850021680094 [NS]D 0.58588 - 217 1 2.238 36186.7 0.8399999737739563 2090 3351 5436 DOHH2_400M_050219_1,5443 DOHH2_400M_050219_1,5443,YSYMRDYYDRQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5444 29.434 529.0 218020.0 25 0 31314.0 32895 SEILSQPKSL 10 143 367.8762064385489 0 367.8766357302666 PEAK CID FTMS 0 0 0 5436 130037.5546875 0.6444469593675837 1 -0.1150760650634765 8 Unmodified _SEILSQPKSL_ ENSG00000083093|ENST00000261584|PALB2 10.823927491677226 0.3685635357628707 1 D 1 10 6.8286 0.0 0.0 0.93065 0.0 0.0 533.620670468115 82.06710230045155 615.6877727685666 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1344005005252609 0.0 D 0.93065 - 9 + 1 2.238 94720.8 1.0 2091 3351 5436 DOHH2_400M_050219_1,5444 DOHH2_400M_050219_1,5444,SEILSQPKSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5445 29.447 800.0 115540.0 25 0 3846.0 + 15122 INENRQFEQIS 11 137 689.3414040244496 1376.6682551156991 2 689.3412353396416 MULTI CID FTMS 0 0 0 5436 110637.5234375 1.0 0 0.0 9 Unmodified _INENRQFEQIS_ REV__ENSG00000061987|ENST00000393630|MON2;REV__ENST00000547095.5_1_12:62864501-62986526:+|nuORF;REV__ENST00000551307.5_1_12:62954224-62986526:+|nuORF;REV__nc|ENSG00000061987|Q7Z3U7-2|MON2;REV__nc|ENSG00000061987|Q7Z3U7-3|MON2;REV__nc|ENSG00000061987|Q7Z3U7-5|MON2;REV__nc|ENSG00000061987|Q7Z3U7-6|MON2 24.881564428377168 0.5079759154518888 1 {[QV]|[N{I|L}]|[RA]|[KV]}PT[MN]RG{M(Oxidation (M))|F}{I|L}SQ 12 -1 + 54.993 0.0 0.0 3.9946 3.9946 73.752 0.0 0.0 0.0 9.68256871239447 8.076804881451437 8.076804881451437 2.993919356110638 0 1.1131178558850543 0.744727494896694 0.0 0.958170666312956 {[QV]|[N{I|L}]|[RA]|[KV]}PT[MN]RG{M(Oxidation (M))|F}{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}E[WQ]RG{M(Oxidation (M))|F}{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PT[MN][VG]G{M(Oxidation (M))|F}{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}EA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[MD]P{I|L}QS;{[ES]|[DT]|[{I|L}C]}[{I|L}P]{M(Oxidation (M))|F}PRG{M(Oxidation (M))|F}{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}EA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}E[WQ][VG]G{M(Oxidation (M))|F}{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}EA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[MD]P{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}EA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}SQ;[NP]{I|L}T[MN]RG{M(Oxidation (M))|F}{I|L}SQ 3.9946;3.7772;3.3337;3.2913;3.2322;3.1431;3.1141;3.0572;2.9091;2.897 -;-;-;-;-;-;-;-;-;- 860 1 2.238 71167.2 0.7900000214576721 2092 3351 5436 DOHH2_400M_050219_1,5445 DOHH2_400M_050219_1,5445,INENRQFEQIS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5446 29.461 800.0 45530.0 25 0 7088.3 -1 0 62 684.6409179568291 0 684.6409179568291 PEAK CID FTMS 0 0 0 -1 0 10 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.238 36566.7 0.7599999904632568 2093 3351 5436 DOHH2_400M_050219_1,5446 DOHH2_400M_050219_1,5446, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5447 29.477 800.0 119610.0 25 0 3814.3 + 5974 DQTQEKIY 8 164 512.7518188357353 0 512.7518188357353 PEAK CID FTMS 0 0 0 -1 0 11 Unmodified _DQTQEKIY_ REV__ENSG00000077935|ENST00000357450|SMC1B;REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B 7.910154910731844 0.5650536163073903 1 DD 2 -1 11.86 0.0 0.0 1.1588 0.0 0.0 158.0705189197144 632.3430880182249 790.4136069379392 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 DD 1.1588 - 15 + 1 2.238 78273.8 0.7200000286102295 2094 3351 5436 DOHH2_400M_050219_1,5447 DOHH2_400M_050219_1,5447,DQTQEKIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5448 29.49 800.0 69121.0 25 0 7081.8 + -1 LFFYMPHHLQS 11 95 718.3447039958567 1434.6748550585132 2 718.3451415896416 MULTI CID FTMS 0 0 0 5436 83880.1171875 1.0 0 0.0 12 Oxidation (M) _LFFYM(Oxidation (M))PHHLQS_ REV__ENSG00000183303|ENST00000329434|OR5P2 17.11289562659939 0.6791789249425932 1 DG{M(Oxidation (M))|F}{I|L}SQ 6 -1 32.541 0.0 0.0 2.2682 0.0 0.0 769.374315330275 0.0 769.374315330275 0.0 17.530834337684315 0.0 0.0 0 0.4124379954164593 0.0 0.0 0.0 DG{M(Oxidation (M))|F}{I|L}SQ 2.2682 - 83 1 2.238 44365.6 0.7599999904632568 2095 3351 5436 DOHH2_400M_050219_1,5448 DOHH2_400M_050219_1,5448,LFFYMPHHLQS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5450 29.498 203.0 559310.0 25 0 63986.0 + 6030 DSDPDRLTY 9 109 541.2430935521555 1080.471634171111 2 541.2445556521416 MULTI CID FTMS 0 0 0 5449 681748.125 1.0 0 0.0 1 Unmodified _DSDPDRLTY_ ENST00000532320.5_1_11:771189-774104:-|nuORF 60.899326713953855 0.0255841537240836 1 {[DS]|[MA]|[CV]|TT}DPDR{I|L}TY 9 0 {[DS]|[MA]|[CV]|TT} + + 49.474 7.8432 3.8817 4.5789 4.5789 55.184 0.0 0.0 0.0 0.0 16.81441061356032 0.0 0.0 0 1.8979400086720373 0.0 0.6549471895720984 0.0 + + {[DS]|[MA]|[CV]|TT}DPDR{I|L}TY 4.5789 + + 367 + 1 2.212 89491.4 1.0 2096 3352 5449 DOHH2_400M_050219_1,5450 DOHH2_400M_050219_1,5450,DSDPDRLTY True True DSDPDRLTY 29.49763 541.244555652142 3033208.5 5449.0 ENST00000532320.5_1_11:771189-774104:-|nuORF 8.870952606201172 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5451 29.501 158.0 436350.0 25 0 49731.0 + 10415 FTATRPGVY 9 104 506.2659271959892 1010.5173014587784 2 506.2661926150322 MULTI CID FTMS 0 0 0 5449 172039.15625 0.2048149960099184 2 -0.0208015441894531 2 Unmodified _FTATRPGVY_ ENSG00000198712|ENST00000361739|MT-CO2 24.020572477871973 0.2255576514309169 1 T{[RE]|[WV]}WATE 7 7 37.989 0.0 0.0 3.7594 0.0 0.0 119.07417494941562 0.0 119.07417494941562 0.0 20.99948217190132 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 T{[RE]|[WV]}WATE 3.7594 - 127 1 2.212 55710.5 1.0 2097 3352 5449 DOHH2_400M_050219_1,5451 DOHH2_400M_050219_1,5451,FTATRPGVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5453 29.505 13.0 3916500.0 25 0 249850.0 + 26428 NTDSPLRY 8 78 483.2379802313025 964.461407529405 2 483.2379333376884 MULTI CID FTMS 0 0 0 5452 4811073.5 0.1349836731450732 -7 0.5209445953369141 1 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 54.773552608820026 0.1167943196628344 1 {[QS]|[NT]}DSP{I|L}RY 8 0 + 66.363 0.0 0.0 6.8808 6.8808 95.907 0.0 0.0 0.0 53.17532531436136 11.40978057358332 11.40978057358332 66.36291294060548 0 0.4247425010840047 2.0 0.0 0.6989700043360187 + + {[QS]|[NT]}DSP{I|L}RY 6.8808 + + 121 + 1 2.212 45719.9 1.0 2098 3353 5452 DOHH2_400M_050219_1,5453 DOHH2_400M_050219_1,5453,NTDSPLRY True True NTDSPLRY 29.50503 483.237933337688 1174952560.0 5452.0 ENST00000478027.2_1_3:39450050-39453856:+|nuORF;;ENSG00000168028|ENST00000301821|RPSA;;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 6.4087527592976885 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5454 29.506 44.0 975160.0 25 0 111730.0 37287 TIQEYQRY 8 82 550.7731304346023 1099.5317079360043 2 550.7734252810478 MULTI CID FTMS 0 0 0 5452 1208082.0 0.7847396682686265 -2 0.1254444122314453 2 Unmodified _TIQEYQRY_ ENST00000555759.1_1_14:95918480-95934190:-|nuORF 13.50788311687929 0.7113601687236069 1 TQG[RH]KY 7 5 27.184 0.0 0.0 2.4723 0.0 0.0 211.0611401643233 0.0 211.0611401643233 0.0 4.335616549778649 0.0 0.0 0 0.0 0.0 0.0 0.5 TQG[RH]KY 2.4723 - 114 + 1 2.212 41334.5 1.0 2099 3353 5452 DOHH2_400M_050219_1,5454 DOHH2_400M_050219_1,5454,TIQEYQRY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5455 29.508 72.0 896120.0 25 0 174880.0 + 21424 LPGSSRAPL 9 59 449.26152529167706 896.5084976501541 2 449.2614623904228 MULTI CID FTMS 0 0 0 5452 992608.375 0.2685095842045417 -4 0.2928676605224609 3 Unmodified _LPGSSRAPL_ ENST00000379789.8_1_10:6275597-6275735:+|nuORF 13.90604991867851 0.4602628045680013 1 {I|L}PG 3 6 44.297 0.0 0.0 4.941 0.0 0.0 0.0 626.3253267877561 626.3253267877561 37.30713133096572 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + {I|L}PG 4.941 + + 25 + 1 2.212 56692.5 1.0 2100 3353 5452 DOHH2_400M_050219_1,5455 DOHH2_400M_050219_1,5455,LPGSSRAPL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5456 29.511 164.0 294650.0 25 0 29268.0 -1 TSLSEPCRP 9 79 523.750285345687 1045.4860177581738 2 523.7507202029228 MULTI CID FTMS 0 0 0 5452 309391.4375 1.0 0 0.0 4 Carbamidomethyl (C) _TSLSEPC(Carbamidomethyl (C))RP_ ENSG00000163520|ENST00000404922|FBLN2;nc|ENSG00000163520|P98095|FBLN2 21.74664581756881 0.2544899275067181 1 {[MG]|[TS]}MST 5 -1 24.833 0.0 0.0 2.3752 0.0 0.0 0.0 535.2645968072874 535.2645968072874 7.35863111416478 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[MG]|[TS]}MST 2.3752 - 81 + 1 2.212 43490.8 1.0 2101 3353 5452 DOHH2_400M_050219_1,5456 DOHH2_400M_050219_1,5456,TSLSEPCRP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5458 29.515 67.0 731750.0 25 0 64260.0 27246 PGSGTSSPSSF 11 93 505.7247731364039 1009.4349933396078 2 505.7250854372978 MULTI CID FTMS 0 0 0 5457 651231.8125 0.3469193566430586 3 -0.149017333984375 1 Unmodified _PGSGTSSPSSF_ ENSG00000162849|ENST00000407071|KIF26B 9.38312468134398 0.8308777417566128 1 {M(Oxidation (M))|F} 1 10 15.485 0.0 0.0 1.534 0.0 0.0 844.3554930728094 0.0 844.3554930728094 0.0 4.515449934959719 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.534 + + 54 + 1 2.212 44773.8 1.0 2102 3354 5457 DOHH2_400M_050219_1,5458 DOHH2_400M_050219_1,5458,PGSGTSSPSSF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5459 29.519 169.0 347830.0 25 0 62531.0 -1 0 73 563.2825485710205 562.2752721044204 1 563.2824584841728 MULTI CID FTMS 0 0 0 5457 339308.75 1.0 0 0.0 2 1 A[MT]{I|L}Q 5 -1 + 22.848 0.0 0.0 4.0635 4.0635 84.154 0.0 0.0 0.0 4.973024840566467 10.96401568399578 4.973024840566467 17.16190326687972 0 0.0 0.0 0.0 0.1421590589602531 A[MT]{I|L}Q;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WT]|[RM]} 4.0635;1.0113 -;- 22 + 1 2.212 50050.5 1.0 2103 3354 5457 DOHH2_400M_050219_1,5459 DOHH2_400M_050219_1,5459, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5460 29.533 800.0 258790.0 25 0 69359.0 + 44465 YNEVREKY 8 59 1100.5390535395695 1099.5317770729696 1 1100.543261706829 MULTI CID FTMS 0 0 0 5457 149235.25 0.984156624141032 -2 0.0208015441894531 3 Unmodified _YNEVREKY_ REV__ENSG00000149231|ENST00000646818|CCDC82 10.073929032068715 0.7620901558688216 1 [{I|L}P][NS]AP{I|L}KY 9 -1 33.707 0.0 0.0 3.0656 0.0 0.0 0.0 112.96516236869732 112.96516236869732 4.778930903698189 0.0 0.0 0.0 0 0.0 0.0 1.0228787452803376 0.0 [{I|L}P][NS]AP{I|L}KY 3.0656 - 234 1 2.212 131872.6 0.6399999856948853 2104 3354 5457 DOHH2_400M_050219_1,5460 DOHH2_400M_050219_1,5460,YNEVREKY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5461 29.546 800.0 64300.0 25 0 6813.9 + -1 RYELIRCRYWC 11 78 837.9001270830022 1673.7857012328045 2 837.9004394412041 MULTI CID FTMS 0 0 0 5457 114897.3046875 0.5613054061262317 -6 0.3782978057861328 4 2 Carbamidomethyl (C) _RYELIRC(Carbamidomethyl (C))RYWC(Carbamidomethyl (C))_ REV__ENSG00000272333|ENST00000420124|KMT2B 0.3506318815782774 0.8734936314171269 1 {[VA]|[{I|L}G]}{I|L}N[TP]N 7 -1 39.926 0.0 0.0 2.3854 0.0 0.0 0.0 961.3852176883496 961.3852176883496 18.767507096020992 0.0 0.0 0.0 0 1.0 1.3979400086720375 0.3494850021680094 0.4247425010840047 {[VA]|[{I|L}G]}{I|L}N[TP]N 2.3854 - 1303 1 2.212 40101.6 0.7099999785423279 2105 3354 5457 DOHH2_400M_050219_1,5461 DOHH2_400M_050219_1,5461,RYELIRCRYWC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5462 29.56 800.0 84340.0 25 0 5127.4 + 32858 SEHPSINKQEW 11 109 677.8220920752755 1353.6296312173508 2 677.8217040896416 MULTI CID FTMS 0 0 0 5457 111670.8125 1.0 0 0.0 5 Unmodified _SEHPSINKQEW_ ENSG00000165684|ENST00000684778|SNAPC4 37.07464296494664 0.257459615863268 1 {[ES]|[DT]|[{I|L}C]}H{[CT]|[{M(Oxidation (M))|F}G]}EQK 8 7 25.896 0.0 0.0 1.9131 0.0 0.0 0.0 408.1867464654906 408.1867464654906 1.4707046590265875 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.805462187404089 {[ES]|[DT]|[{I|L}C]}H{[CT]|[{M(Oxidation (M))|F}G]}EQK 1.9131 - 400 + 1 2.212 55199.7 0.75 2106 3354 5457 DOHH2_400M_050219_1,5462 DOHH2_400M_050219_1,5462,SEHPSINKQEW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5463 29.574 800.0 82304.0 25 0 5868.5 -1 0 103 631.32986973458 630.32259326798 1 631.3330566287041 MULTI CID FTMS 0 0 0 5457 92096.9296875 0.0497066003498603 6 -0.2156009674072265 6 1 {[QN]|[E{I|L}]|[KN]}E{I|L}Q 5 -1 + 67.237 0.0 0.0 10.667 10.667 97.76 0.0 0.0 0.0 15.752574989159951 35.79812217439503 15.752574989159951 19.247425010840047 0 1.274227503252014 1.3979400086720375 1.1307196863200843 0.0 {[QN]|[E{I|L}]|[KN]}E{I|L}Q;{[QN]|[E{I|L}]|[KN]}{I|L}EQ;{[QN]|[E{I|L}]|[KN]}[VP]{[CA]|SS};{[CA]|SS}{[QN]|[E{I|L}]|[KN]}VP;[VP]E{I|L}{[CA]|SS};[VP]ES{[TV]|[{I|L}S]};{[CA]|SS}[{I|L}V]EP 10.667;7.6135;3.4091;1.3133;1.2167;1.2096;1.0339 -;-;-;-;-;-;- 100 1 2.212 56406.6 0.75 2107 3354 5457 DOHH2_400M_050219_1,5463 DOHH2_400M_050219_1,5463, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5465 29.581 148.0 378200.0 25 0 31774.0 + 6993 EEIPVSSHY 9 93 530.7506262716801 1059.48669961016 2 530.7514526247978 MULTI CID FTMS 0 0 0 5464 219663.109375 0.1157147530929395 4 -0.1485805511474609 1 Unmodified _EEIPVSSHY_ ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 34.10243960390752 0.1078313939113124 1 EET 3 7 27.932 0.0 0.0 2.6364 0.0 0.0 0.0 697.3366806494756 697.3366806494756 0.9351706940305248 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.0 EET 2.6364 - 84 1 2.192 51124.9 1.0 2108 3355 5464 DOHH2_400M_050219_1,5465 DOHH2_400M_050219_1,5465,EEIPVSSHY True True EEIPVSSHY 29.580589 530.751452624798 17422786.0 5464.0 ENST00000558825.5_1_15:91337395-91358506:+|nuORF;;ENSG00000197299|ENST00000355112|BLM;;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 8.403710206349691 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5466 29.59 520.0 179120.0 25 0 25421.0 + 45549 YVDDPYQKY 9 113 595.7721245195012 1189.5296961058025 2 595.7722045779228 MULTI CID FTMS 0 0 0 5464 215006.3125 0.2366022412177064 4 -0.1485805511474609 2 Unmodified _YVDDPYQKY_ ENSG00000132313|ENST00000337109|MRPL35 53.832793166522166 0.0319663582346103 1 YVDD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QKY 9 0 + 87.317 0.0 0.0 7.3405 7.3405 91.604 0.0 0.0 0.0 65.31743128760553 13.46787486224656 13.46787486224656 9.208187539523747 0 1.066901560044258 2.0 0.0 0.805462187404089 + + YVDD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QKY;YVDD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]KY;YVDD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YK]Q;YV[C(Carbamidomethyl (C))S]{[QD]|[EN]|[WG]|[KD]|[RS]}QKY;YVDDYY[KP]Q;YVDDYY[KA][PG];YV[C(Carbamidomethyl (C))S][R{M(Oxidation (M))|F}]D{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};YYDKKDD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};YV[KQ]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}D{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};YYDKK[WC(Carbamidomethyl (C))]Q 7.3405;6.5664;5.4484;4.8303;4.7272;3.9729;2.9912;2.9246;2.8431;1.5196 +;-;-;-;-;-;-;-;-;- + 448 + 1 2.192 72107.3 1.0 2109 3355 5464 DOHH2_400M_050219_1,5466 DOHH2_400M_050219_1,5466,YVDDPYQKY True True YVDDPYQKY 29.589752 595.772204577923 11127408.0 5464.0 ENSG00000132313|ENST00000337109|MRPL35 9.095053513844809 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5467 29.591 24.0 2246800.0 25 0 245290.0 + 11193 GENDRGVSF 9 70 490.72496641958696 979.435379905974 2 490.7252075076103 MULTI CID FTMS 0 0 0 5464 2443697.25 0.4673622537760577 -3 0.0838775634765625 3 Unmodified _GENDRGVSF_ ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000462832.5_1_2:29006774-29038903:+|nuORF;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532279.1_1_11:67166350-67167062:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC 47.594388314883695 0.0456443387682827 1 {[DA]|[EG]}NDRRS 7 3 40.237 0.0 0.0 4.1082 0.0 0.0 0.0 162.05661951236564 162.05661951236564 5.556803488594113 0.0 0.0 0.0 0 1.2302046884880935 1.5228787452803376 0.3252574989159953 0.0 {[DA]|[EG]}NDRRS 4.1082 - 60 + 1 2.192 46991.9 1.0 2110 3355 5464 DOHH2_400M_050219_1,5467 DOHH2_400M_050219_1,5467,GENDRGVSF True True GENDRGVSF 29.590931 490.72520750761 52061112.0 5464.0 ENSG00000213639|ENST00000395366|PPP1CB;;ENSG00000172531|ENST00000376745|PPP1CA;;nc|ENSG00000186298|P36873-2|PPP1CC;;ENST00000532279.1_1_11:67166350-67167062:-|nuORF;;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;;ENSG00000186298|ENST00000335007|PPP1CC;;ENST00000462832.5_1_2:29006774-29038903:+|nuORF;;nc|ENSG00000172531|P62136-3|PPP1CA;;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;;nc|ENSG00000172531|P62136-2|PPP1CA 7.631734371185303 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5468 29.601 582.0 442370.0 25 0 77141.0 + 37432 TLDENPGVRY 10 144 582.288041938796 1162.561530944392 2 582.2886230349541 MULTI CID FTMS 0 0 0 5464 389934.84375 0.3573581220167209 -2 0.0735092163085937 4 Unmodified _TLDENPGVRY_ ENSG00000116266|ENST00000370008|STXBP3 90.13494162714682 0.0093239051209448 1 T{I|L}DENPGVRY 10 0 + 116.89 0.0 0.0 10.054 10.054 93.107 0.0 0.0 0.0 93.20526164953256 7.992953198672268 7.992953198672268 9.164539485499247 0 1.7198565171985374 2.0 0.7302046884880937 1.5044321917401078 + + T{I|L}DENPGVRY;T{I|L}DEGGPGVRY;T{I|L}DENP{[QV]|[N{I|L}]|[RA]|[KV]}[{M(Oxidation (M))|F}T];T{I|L}DENY{[NV]|[RG]}VP;[{I|L}T]{[NV]|[RG]}YNEDVP;T{I|L}DEGGP{[QV]|[N{I|L}]|[RA]|[KV]}[{M(Oxidation (M))|F}T];T{I|L}DEGGY{[NV]|[RG]}VP;[{I|L}T]{[NV]|[RG]}YGGEDVP;T{I|L}DEN[RV][PG]Y;T{I|L}DEN[RV][YG]P 10.054;9.2661;8.5634;8.1259;7.8623;7.7751;7.3376;7.074;6.9324;6.5754 +;-;-;-;-;-;-;-;-;- + 2783 + 1 2.192 191731.0 1.0 2111 3355 5464 DOHH2_400M_050219_1,5468 DOHH2_400M_050219_1,5468,TLDENPGVRY True True TLDENPGVRY 29.601125 582.288623034954 10459002.0 5464.0 ENSG00000116266|ENST00000370008|STXBP3 7.914479414621989 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5469 29.603 77.0 1089600.0 25 0 346610.0 + 8546 ETHARIAL 8 74 455.7587342570441 909.5029155808884 2 455.7585632205009 MULTI CID FTMS 0 0 0 5464 311651.40625 1.0 0 0.0 5 Unmodified _ETHARIAL_ ENSG00000167615|ENST00000326764|LENG8;nc|ENSG00000167615|Q96PV6-1|LENG8 8.593279151180031 0.7721714526254883 1 AH[DP] 4 7 11.972 0.0 0.0 1.3164 0.0 0.0 471.3179188459 0.0 471.3179188459 0.0 0.552414100986649 0.0 0.0 0 0.0 0.0 0.0 0.0 AH[DP] 1.3164 - 22 1 2.192 70960.8 1.0 2112 3355 5464 DOHH2_400M_050219_1,5469 DOHH2_400M_050219_1,5469,ETHARIAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5470 29.617 800.0 219060.0 25 0 29785.0 + + 20532 IIKKLGGSL 9 143 464.8132152141818 927.6118774951636 2 464.8132507205009 MULTI CID FTMS 0 0 0 5464 96108.46875 0.2344157592291547 -4 0.198953628540039 6 Unmodified _LLLRTISI_ nc|ENSG00000166226|P78371-2|CCT2;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;ENSG00000166226|ENST00000299300|CCT2 54.773552608820026 0.1167943196628344 1 {I|L}{I|L}KK{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L} 8 -1 + 75.755 0.0 0.0 8.1667 8.1667 86.324 0.0 0.0 0.0 60.0772861146465 14.024174299985006 14.024174299985006 3.0546218740408904 0 0.8494850021680094 2.0 1.1549471895720984 0.3807196863200844 {I|L}{I|L}KK{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{I|L}{I|L}KK{[DA]|[EG]}K{I|L};{I|L}{I|L}KK{[VA]|[{I|L}G]}GS{I|L};{I|L}{I|L}KK{[QV]|[N{I|L}]|[RA]|[KV]}TV;{I|L}{I|L}KK{[VA]|[{I|L}G]}GTV;{[TV]|[{I|L}S]}NKK{I|L}{I|L}{I|L};[K{I|L}]K[NS]{I|L}{I|L}{I|L};KK{I|L}[NS]{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}GGKK{I|L}{I|L}{I|L};[K{I|L}]KV{[QS]|[NT]}{I|L}{I|L} 8.1667;7.8374;7.8363;6.2546;5.9242;2.6437;2.0182;1.9557;1.6452;1.3692 -;-;-;-;-;-;-;-;-;- 435 + 1 2.192 134071.3 0.6000000238418579 2113 3355 5464 DOHH2_400M_050219_1,5470 DOHH2_400M_050219_1,5470,LLLRTISI False False IIKKLGGSL 29.61671 464.813250720501 1784829.125 5464.0 nc|ENSG00000166226|P78371-2|CCT2;;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;;ENSG00000166226|ENST00000299300|CCT2 2.2273650566736856 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5471 29.63 778.0 365970.0 25 0 33675.0 + 37475 TLFFFLLLS 9 247 367.552443620312 1099.635501461136 3 367.5525390505791 MULTI CID FTMS 0 0 0 5464 78526.2109375 0.4164583619739338 -1 0.0630760192871093 7 Unmodified _TLFFFLLLS_ REV__ENSG00000129009|ENST00000249842|ISLR 16.942295170755138 0.3780752226737986 1 S{I|L} 2 -1 19.821 0.0 0.0 1.8025 0.0 0.0 881.5083022197283 0.0 881.5083022197283 0.0 5.854706403678875 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 S{I|L} 1.8025 - 559 + 1 2.192 218881.7 1.0 2114 3355 5464 DOHH2_400M_050219_1,5471 DOHH2_400M_050219_1,5471,TLFFFLLLS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5472 29.643 719.0 169000.0 25 0 19008.0 -1 ECKECRKCFY 10 140 711.8000159536352 1421.5854789740704 2 711.8007690310478 MULTI CID FTMS 0 0 0 5464 273376.65625 0.1251140149616462 7 -0.2780513763427734 8 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFY_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 13.90604991867851 0.6142120002215601 1 [AG]DAHEAGAQDA{M(Oxidation (M))|F}Y 14 -1 + 103.21 0.0 0.0 7.26 7.26 81.321 0.0 0.0 0.0 1.9188552623891293 16.667853209646168 1.9188552623891293 0.6472532963665429 0 0.9247425010840048 1.2218487496163564 0.9559771852360796 1.1861818737241734 [AG]DAHEAGAQDA{M(Oxidation (M))|F}Y;[AG]DAHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y;[AG]ADHEAGAQDA{M(Oxidation (M))|F}Y;[AG]AHDEAGAQDA{M(Oxidation (M))|F}Y;[AG]ADHEAQQDA{M(Oxidation (M))|F}Y;[AG]AHDEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}Y 7.26;7.2145;7.125;7.0795;7.0483;7.0285;7.0027;6.9829;6.9384;6.8946 -;-;-;-;-;-;-;-;-;- 5551 1 2.192 89996.2 1.0 2115 3355 5464 DOHH2_400M_050219_1,5472 DOHH2_400M_050219_1,5472,ECKECRKCFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5474 29.656 623.0 165640.0 25 0 19780.0 + 6153 DSYWRETIC 9 123 586.756936008985 1171.49931908477 2 586.7574951052666 MULTI CID FTMS 0 0 0 5473 151756.375 0.1432522414966139 4 -0.084075927734375 1 Unmodified _DSYWRETIC_ ENST00000355557.6_1_12:133682357-133682435:+|nuORF 38.17557092003332 0.0854718145212029 1 {[DS]|[MA]|[CV]|TT}YV{[C(Carbamidomethyl (C))E]|[WC]}[VS]T{I|L} 10 5 + 34.64 0.0 0.0 2.9569 2.9569 67.147 0.0 0.0 0.0 17.94408732588998 4.713855345942335 4.713855345942335 0.0649873629158221 0 0.7742275032520141 0.0 0.3252574989159953 0.0 {[DS]|[MA]|[CV]|TT}YV{[C(Carbamidomethyl (C))E]|[WC]}[VS]T{I|L};{[DS]|[MA]|[CV]|TT}YV{[C(Carbamidomethyl (C))E]|[WC]}RM{I|L};{[DS]|[MA]|[CV]|TT}YVR{[C(Carbamidomethyl (C))E]|[WC]}M{I|L};{[DS]|[MA]|[CV]|TT}YV{[C(Carbamidomethyl (C))E]|[WC]}RP{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}YVR{[C(Carbamidomethyl (C))E]|[WC]}P{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}YV[VG]{[C(Carbamidomethyl (C))E]|[WC]}M{I|L};{[DS]|[MA]|[CV]|TT}YYY[{M(Oxidation (M))|F}T]T{I|L};{[DS]|[MA]|[CV]|TT}YYY[WY]{I|L};{[DS]|[MA]|[CV]|TT}YV[VG]{[C(Carbamidomethyl (C))E]|[WC]}P{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}YYY[W{I|L}]Y 2.9569;2.9513;2.4788;2.2434;1.7709;1.6928;1.6284;1.0548;0.98487;0.59034 -;-;-;-;-;-;-;-;-;- 222 + 1 2.192 80636.2 1.0 2116 3356 5473 DOHH2_400M_050219_1,5474 DOHH2_400M_050219_1,5474,DSYWRETIC True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5475 29.658 99.0 1207600.0 25 0 467900.0 37526 TLHPVWSQQ 9 107 548.282761396406 1094.550969859612 2 548.2831298708916 MULTI CID FTMS 0 0 0 5473 390621.34375 0.3136131615192146 6 -0.2096023559570312 2 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 17.44264345198275 0.3645313841742926 1 [{I|L}P]RY 4 7 25.718 0.0 0.0 2.3497 0.0 0.0 0.0 562.2239184282245 562.2239184282245 9.822712330395689 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.3807196863200844 [{I|L}P]RY 2.3497 - 171 1 2.192 98403.4 1.0 2117 3356 5473 DOHH2_400M_050219_1,5475 DOHH2_400M_050219_1,5475,TLHPVWSQQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5476 29.66 113.0 636080.0 25 0 48071.0 + 29112 QERDPSKIKW 10 97 429.5665195783946 1285.677729335384 3 429.5668823122978 MULTI CID FTMS 0 0 0 5473 330003.78125 0.7316338283929563 -4 0.1523265838623047 3 Unmodified _QERDPSKIKW_ ENSG00000111640|ENST00000229239|GAPDH;nc|ENSG00000111640|P04406-2|GAPDH 30.43146612281011 0.2849569935312043 1 PSK{I|L}KW 6 4 31.865 0.0 0.0 2.4784 0.0 0.0 528.2274776264273 0.0 528.2274776264273 0.0 20.093728280886943 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.3494850021680094 + PSK{I|L}KW 2.4784 + + 89 + 1 2.192 63379.5 1.0 2118 3356 5473 DOHH2_400M_050219_1,5476 DOHH2_400M_050219_1,5476,QERDPSKIKW False True QERDPSKIKW 29.660139 429.566882312298 2671276.75 5473.0 nc|ENSG00000111640|P04406-2|GAPDH;;ENSG00000111640|ENST00000229239|GAPDH 6.148068110148112 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5478 29.669 270.0 269930.0 25 0 16950.0 + 25500 NELVSTHGY 9 114 510.24309254950737 1018.4716321658148 2 510.2429992556572 MULTI CID FTMS 0 0 0 5477 225528.0625 0.1735509767568743 5 -0.1921100616455078 1 Unmodified _NELVSTHGY_ ENSG00000105325|ENST00000441788|FZR1;ENST00000586212.1_1_19:3532513-3533660:+|nuORF;nc|ENSG00000105325|Q9UM11-3|FZR1;nc|ENSG00000105325|Q9UM11|FZR1 43.85829265575387 0.0542763391141878 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSHGTY 9 2 + 49.536 0.0 0.0 4.8637 4.8637 87.761 0.0 0.0 0.0 38.73380636665303 16.478174818886366 16.478174818886366 23.049537427956103 0 1.3494850021680094 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSHGTY;[QA]T{I|L}EHGTY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VST[YG]H;{[QD]|[EN]|[WG]|[KD]|[RS]}EHYKS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V[W{M(Oxidation (M))|F}][DP];{[WN]|[YH]}{I|L}[WH]TY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VS[{M(Oxidation (M))|F}V][DP];{[QD]|[EN]|[WG]|[KD]|[RS]}[HV][SG]{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VS[MT][EP];{[ET]|[MV]}[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{I|L}TY 4.8637;2.6006;2.4656;2.2891;2.135;1.9089;1.8843;1.5656;1.3557;1.0966 -;-;-;-;-;-;-;-;-;- 334 + 1 2.171 58332.2 1.0 2119 3357 5477 DOHH2_400M_050219_1,5478 DOHH2_400M_050219_1,5478,NELVSTHGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5479 29.673 242.0 174270.0 25 0 15419.0 41106 VNLSYFEPIA 10 88 576.7984924189092 1151.5824319046185 2 576.8001586794853 MULTI CID FTMS 0 0 0 5477 194889.859375 0.839324763838466 -3 0.149017333984375 2 Unmodified _VNLSYFEPIA_ ENST00000525487.2_1_11:50227376-50227820:+|nuORF 2.9952420565917617 0.7127817445270067 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.171 37479.4 1.0 2120 3357 5477 DOHH2_400M_050219_1,5479 DOHH2_400M_050219_1,5479,VNLSYFEPIA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5480 29.687 800.0 121810.0 25 0 15597.0 29798 QQEEQEEKEEE 11 118 717.7989982640445 1433.5834435948889 2 717.7994872927666 MULTI CID FTMS 0 0 0 5477 113767.125 0.7290457676702654 1 -0.0406532287597656 3 Unmodified _QQEEQEEKEEE_ ENSG00000089289|ENST00000356413|IGBP1 14.40537977576856 0.7354982482299568 1 {[DA]|[EG]}QM{M(Oxidation (M))|F}AQQDA{M(Oxidation (M))|F}Y 12 11 + 75.453 0.0 0.0 5.2632 5.2632 78.636 0.0 0.0 0.0 3.690227570588519 58.46320587632272 3.690227570588519 3.06553388754702 0 1.43753063169585 1.3010299956639813 0.8737125054200234 1.4258337024346173 {[DA]|[EG]}QM{M(Oxidation (M))|F}AQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}[YN]EAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAM{M(Oxidation (M))|F}AQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}G[YG]EAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AM{M(Oxidation (M))|F}AQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QM{M(Oxidation (M))|F}AQQW{M(Oxidation (M))|F}Y;{[DA]|[EG]}Q[WY]QQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QM{M(Oxidation (M))|F}A[AG]QDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QM{M(Oxidation (M))|F}AQ[AG]DA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}[YG]EAQQDA{M(Oxidation (M))|F}Y 5.2632;5.0494;4.9699;4.9232;4.8125;4.7464;4.6494;4.6286;4.6286;4.5987 -;-;-;-;-;-;-;-;-;- 1214 1 2.171 71840.9 0.7099999785423279 2121 3357 5477 DOHH2_400M_050219_1,5480 DOHH2_400M_050219_1,5480,QQEEQEEKEEE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5481 29.701 800.0 163260.0 25 0 9364.5 -1 0 162 562.3070886806302 561.2998122140301 1 562.3069335818291 MULTI CID FTMS 0 0 0 5477 149508.6875 0.5890841320619344 3 -0.0665836334228515 4 1 Y 1 -1 12.218 0.0 0.0 2.1768 0.0 0.0 380.22524053609885 0.0 380.22524053609885 0.0 0.9594276311945648 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.1768 - 96 + 1 2.171 100172.4 0.75 2122 3357 5477 DOHH2_400M_050219_1,5481 DOHH2_400M_050219_1,5481, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5483 29.717 800.0 157880.0 25 0 26598.0 + 32853 SEGYPGQRYY 10 127 610.2728577274205 1218.531162521641 2 610.2733642458916 MULTI CID FTMS 0 0 0 5482 74750.6796875 0.1943554672297074 5 -0.2476158142089843 1 Unmodified _SEGYPGQRYY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 18.1463463914782 0.5430639438673815 1 {[YC]|[HE]}{[VA]|[{I|L}G]}P 5 7 15.686 0.0 0.0 1.2873 0.0 0.0 0.0 682.2967626302564 682.2967626302564 0.2287874528033722 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[YC]|[HE]}{[VA]|[{I|L}G]}P 1.2873 - 229 + 1 2.171 95163.5 0.6899999976158142 2123 3358 5482 DOHH2_400M_050219_1,5483 DOHH2_400M_050219_1,5483,SEGYPGQRYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5484 29.723 330.0 210090.0 25 0 13676.0 + 25562 NEVESGYHSL 10 102 567.7566534103727 0 567.7560912966728 PEAK CID FTMS 0 0 0 5482 126879.96875 0.4746708707297369 -2 0.058145523071289 2 Unmodified _NEVESGYHSL_ ENSG00000198846|ENST00000361421|TOX;TOX|p.K307Nfs*16|1|0.26|ENSG00000198846|chr8:58838084-58838084|T/-|frameshift_variant 46.0223103267499 0.0708295365976018 1 VES 3 7 33.522 0.0 0.0 2.9574 0.0 0.0 243.08334792368532 572.2475679986936 815.3309159223791 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.2302046884880935 0.0 + VES 2.9574 + + 305 + 1 2.171 60471.2 1.0 2124 3358 5482 DOHH2_400M_050219_1,5484 DOHH2_400M_050219_1,5484,NEVESGYHSL True True NEVESGYHSL 29.722716 567.756091296673 1046801.8125 5482.0 TOX|p.K307Nfs*16|1|0.26|ENSG00000198846|chr8:58838084-58838084|T/-|frameshift_variant;;ENSG00000198846|ENST00000361421|TOX 6.686559677124023 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5487 29.733 249.0 403510.0 25 0 47313.0 + 6934 EEGDRVITY 9 115 541.261225186691 1080.507897440182 2 541.2620727419853 MULTI CID FTMS 0 0 0 5486 265894.34375 0.544718081845812 -2 0.0259304046630859 1 Unmodified _EEGDRVITY_ ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A 53.832793166522166 0.0319663582346103 1 {[ET]|[MV]}{M(Oxidation (M))|F}YV{I|L}{M(Oxidation (M))|F}Y 8 5 + 36.904 0.0 0.0 3.4154 3.4154 76.701 0.0 0.0 0.0 5.8764313220972575 6.17381525498196 5.8764313220972575 7.316759732431706 0 0.8494850021680094 0.0 0.805462187404089 0.0 {[ET]|[MV]}{M(Oxidation (M))|F}YV{I|L}{M(Oxidation (M))|F}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}V]V{I|L}{M(Oxidation (M))|F}Y;[QA]E{I|L}VY{M(Oxidation (M))|F}[DP];[QA]E{I|L}VYM{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}T]EYV{I|L}{M(Oxidation (M))|F}Y;[{M(Oxidation (M))|F}T]HHY{I|L}TY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KG][YR]TY;{[ES]|[DT]|[{I|L}C]}T[DP]R{I|L}TY;[{M(Oxidation (M))|F}T][RH][SG]{I|L}TY;{[ES]|[DT]|[{I|L}C]}T[K{I|L}][HC]TY 3.4154;2.7383;2.6031;2.5098;2.3506;2.0743;1.8836;1.7613;1.6586;1.6102 -;-;-;-;-;-;-;-;-;- 331 1 2.171 82644.2 1.0 2125 3360 5486 DOHH2_400M_050219_1,5487 DOHH2_400M_050219_1,5487,EEGDRVITY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5488 29.747 800.0 178520.0 25 0 10945.0 + 7173 EEPSRPSASW 10 165 573.2646898794615 1144.5148268257228 2 573.2649413943291 MULTI CID FTMS 0 0 0 5486 97917.9296875 0.5820981941782076 -2 0.0259304046630859 2 Unmodified _EEPSRPSASW_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000545049.1_1_12:2977686-2983239:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 38.17557092003332 0.1768326257063233 1 EEP{[ES]|[DT]|[{I|L}C]}[WQ]{I|L}Q 9 6 + 35.44 0.0 0.0 3.0965 3.0965 72.875 0.0 0.0 0.0 5.055910365907273 5.055910365907273 5.055910365907273 3.979400086720375 0 1.079689690656103 1.5228787452803376 0.3494850021680094 0.2742275032520141 EEP{[ES]|[DT]|[{I|L}C]}[WQ]{I|L}Q;EE{[ES]|[DT]|[{I|L}C]}P[WQ]{I|L}Q;EE[WK]KW[HC];{NN|[MP]|[D{I|L}]|[EV]}N{[ET]|[MV]}KW[HC];{[WS]|[C(Carbamidomethyl (C)){I|L}]}K{[HG]|PP}S[C(Carbamidomethyl (C))R]Q;{[WS]|[C(Carbamidomethyl (C)){I|L}]}K[TA]{[{M(Oxidation (M))|F}D]|MM}YQ;{[WS]|[C(Carbamidomethyl (C)){I|L}]}K{[HG]|PP}S[NG]SW;{[WS]|[C(Carbamidomethyl (C)){I|L}]}K{[HG]|PP}SWEE;{[WS]|[C(Carbamidomethyl (C)){I|L}]}K{[HG]|PP}[HC]YQ;{[WS]|[C(Carbamidomethyl (C)){I|L}]}K[TA]{[ES]|[DT]|[{I|L}C]}P[HC] 3.0965;2.7488;2.6548;1.2469;1.1709;0.99367;0.99216;0.90793;0.79984;0.79984 -;-;-;-;-;-;-;-;-;- 393 + 1 2.171 109152.9 0.8600000143051147 2126 3360 5486 DOHH2_400M_050219_1,5488 DOHH2_400M_050219_1,5488,EEPSRPSASW False True EEPSRPSASW 29.747293 573.264941394329 4281933.5 5486.0 ENSG00000111206|ENST00000359843|FOXM1;;nc|ENSG00000111206|Q08050-2|FOXM1;;nc|ENSG00000111206|Q08050-3|FOXM1;;ENST00000545049.1_1_12:2977686-2983239:-|nuORF 7.299299081166585 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5489 29.753 289.0 490410.0 25 0 36125.0 + 32814 SEFPGAQHY 9 136 518.230092929454 1034.445632925708 2 518.2305786013603 MULTI CID FTMS 0 0 0 5486 216412.140625 0.7103962559392126 -3 0.0665836334228515 3 Unmodified _SEFPGAQHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000566509.5_1_15:73052730-73067416:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-5|ADPGK 32.30548876998284 0.1201446275138228 1 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[QA]HY 9 0 + 37.898 0.0 0.0 3.6636 3.6636 76.462 0.0 0.0 0.0 25.133462145486803 7.624562618571254 7.624562618571254 6.47817481888638 0 0.805462187404089 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[QA]HY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PQQHY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG{[WT]|[RM]}[DP];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ET]|[MV]}Y;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PWW[PS];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}P[NP][EC]{I|L};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}TP[DP];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[TA]ATP[DP];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}[EP][PS];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[TA][HM]{[NV]|[RG]} 3.6636;3.0373;2.8324;1.9263;1.5977;1.4796;0.89724;0.60623;0.026612;0.014785 +;-;-;-;-;-;-;-;-;- + 383 + 1 2.171 111541.6 1.0 2127 3360 5486 DOHH2_400M_050219_1,5489 DOHH2_400M_050219_1,5489,SEFPGAQHY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5490 29.766 800.0 219680.0 25 0 16182.0 + 406 AEEDPAHAF 9 161 493.7145526140839 985.4145522949678 2 493.7144653201103 MULTI CID FTMS 0 0 0 5486 104448.40625 0.5179329103627988 -2 0.0259304046630859 4 Unmodified _AEEDPAHAF_ ENSG00000170145|ENST00000304987|SIK2 30.22481116460888 0.1466181017706357 1 [HA]PDEA{M(Oxidation (M))|F}{[CP]|[EA]} 9 5 + 26.651 0.0 0.0 2.7045 2.7045 71.405 0.0 0.0 0.0 2.6874526330887605 -1.2285021059715646 -1.2285021059715646 3.485895483590689 0 0.0 0.0 0.6861818737241735 0.0 [HA]PDEA{M(Oxidation (M))|F}{[CP]|[EA]};[HA]PADE{M(Oxidation (M))|F}{[CP]|[EA]};{[CP]|[EA]}EDPAHA{M(Oxidation (M))|F};{[CP]|[EA]}[WY]A{M(Oxidation (M))|F}{[CP]|[EA]};[TA][{M(Oxidation (M))|F}T]EA{M(Oxidation (M))|F}{[CP]|[EA]};[HA]PDAE{M(Oxidation (M))|F}{[CP]|[EA]};[PA]HDEA{M(Oxidation (M))|F}{[CP]|[EA]};{[CP]|[EA]}E[YC(Carbamidomethyl (C))]TT{I|L};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]A{M(Oxidation (M))|F}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}AE{[C(Carbamidomethyl (C))E]|[WC]}{I|L} 2.7045;2.3508;2.2638;2.0279;1.9777;1.6879;1.6218;1.5859;1.5469;1.5165 -;-;+;-;-;-;-;-;-;- + 962 1 2.171 136032.8 0.8299999833106995 2128 3360 5486 DOHH2_400M_050219_1,5490 DOHH2_400M_050219_1,5490,AEEDPAHAF False True AEEDPAHAF 29.766426 493.71446532011 3743452.5 5486.0 ENSG00000170145|ENST00000304987|SIK2 7.545963446299235 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5491 29.77 197.0 544630.0 25 0 155330.0 + 7043 EELERDKRVTW 11 94 487.5879084044144 1459.741895813443 3 487.5877563357353 MULTI CID FTMS 0 0 0 5486 274760.6875 0.8636469275226851 1 -0.048675537109375 5 Unmodified _EELERDKRVTW_ ENSG00000213593|ENST00000278422|TMX2;nc|ENSG00000213593|Q9Y320-2|TMX2 19.61532865858139 0.6271255510390112 1 EE{I|L}E 4 7 51.414 0.0 0.0 3.5222 0.0 0.0 0.0 956.51061592159 956.51061592159 26.63811573052314 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 + EE{I|L}E 3.5222 + + 150 + 1 2.171 86073.9 1.0 2129 3360 5486 DOHH2_400M_050219_1,5491 DOHH2_400M_050219_1,5491,EELERDKRVTW False True EELERDKRVTW 29.77019 487.587756335735 1595862.75 5486.0 ENSG00000213593|ENST00000278422|TMX2;;nc|ENSG00000213593|Q9Y320-2|TMX2 6.97605021794637 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5492 29.775 277.0 411550.0 25 0 59232.0 + 42216 VSGVLQAL 8 127 393.7401692433383 785.4657855534766 2 393.7394592165947 MULTI CID FTMS 0 0 0 5486 253887.390625 0.8315035314659192 -1 0.0039443969726562 6 Unmodified _VSGVLQAL_ ENSG00000130299|ENST00000324894|GTPBP3;ENST00000598038.5_1_19:17448347-17452509:+|nuORF;nc|ENSG00000130299|Q969Y2-2|GTPBP3;nc|ENSG00000130299|Q969Y2-3|GTPBP3;nc|ENSG00000130299|Q969Y2-4|GTPBP3 53.57557251787612 0.1224291679108181 1 {I|L}D 2 7 36.119 0.0 0.0 4.5984 0.0 0.0 0.0 554.3297823541624 554.3297823541624 11.98945184671841 0.0 0.0 0.0 0 0.2134679910804404 1.2218487496163564 0.3807196863200844 0.0 {I|L}D 4.5984 - 204 + 1 2.171 88864.6 1.0 2130 3360 5486 DOHH2_400M_050219_1,5492 DOHH2_400M_050219_1,5492,VSGVLQAL True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5494 29.78 1.8 25143000.0 25 0 1879000.0 + 26429 NTDSPLRY 8 66 483.2379802313025 964.461407529405 2 483.2383605837822 MULTI CID FTMS 0 0 0 5493 32800216.0 0.9202714603366172 1 -0.0768508911132812 1 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 37.97399986684836 0.2681860861828418 1 {[QS]|[NT]}DSP{I|L}RY 8 0 + 63.353 0.0 0.0 6.5687 6.5687 95.009 0.0 0.0 0.0 48.576315990684265 11.8943306386236 11.8943306386236 63.35261298396567 0 0.4247425010840047 2.0 0.0 0.0 + + {[QS]|[NT]}DSP{I|L}RY 6.5687 + + 125 + 1 2.158 40629.9 1.0 2131 3361 5493 DOHH2_400M_050219_1,5494 DOHH2_400M_050219_1,5494,NTDSPLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5495 29.781 33.0 1457300.0 25 0 300480.0 + 21839 LPNVRVAE 8 53 449.26152529167706 896.5084976501541 2 449.2614013552666 MULTI CID FTMS 0 0 0 5493 1681044.0 0.4547376758427406 4 -0.3299770355224609 2 Unmodified _LPNVRVAE_ REV__ENSG00000013306|ENST00000377095|SLC25A39;REV__ENST00000591006.5_1_17:42397371-42398600:-|nuORF;REV__nc|ENSG00000013306|Q9BZJ4-2|SLC25A39 16.942295170755138 0.6606234159769251 1 {I|L}P 2 -1 41.454 0.0 0.0 4.6239 0.0 0.0 0.0 683.3490471460079 683.3490471460079 31.84955642535897 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}P 4.6239 + + 8 + 1 2.158 42814.6 1.0 2132 3361 5493 DOHH2_400M_050219_1,5495 DOHH2_400M_050219_1,5495,LPNVRVAE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5496 29.784 146.0 392560.0 25 0 46920.0 + 23645 LTQSMPSHTV 10 102 550.7731304346023 1099.5317079360043 2 550.7734863162041 MULTI CID FTMS 0 0 0 5493 370195.0 0.2404693567942442 6 -0.433450698852539 3 Unmodified _LTQSMPSHTV_ REV__ENSG00000078053|ENST00000356264|AMPH;REV__nc|ENSG00000078053|P49418-2|AMPH 18.1463463914782 0.5430639438673815 1 TQG[RH]KY 7 -1 25.934 0.0 0.0 2.3587 0.0 0.0 211.06253699328232 0.0 211.06253699328232 0.0 15.753433945713269 0.0 0.0 0 0.0 0.0 0.0 0.5 TQG[RH]KY 2.3587 - 148 + 1 2.158 49677.3 1.0 2133 3361 5493 DOHH2_400M_050219_1,5496 DOHH2_400M_050219_1,5496,LTQSMPSHTV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5497 29.798 800.0 151450.0 25 0 18275.0 + 8456 ESSEYQSYSQY 11 145 685.7708979988017 1369.5272430644034 2 685.7718383669853 MULTI CID FTMS 0 0 0 5493 207024.0 0.8584533239342901 -1 0.048675537109375 4 Unmodified _ESSEYQSYSQY_ ENSG00000172538|ENST00000311787|FAM170B 23.78978130925829 0.5336113198261219 1 {[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]QDC(Carbamidomethyl (C)){M(Oxidation (M))|F}QY 10 6 + 42.226 0.0 0.0 3.0833 3.0833 71.982 0.0 0.0 0.0 13.03901102397704 0.3109965431441139 0.3109965431441139 3.2642858965852923 0 0.7429928190999391 2.0 0.5649093276264391 0.805462187404089 {[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]QDC(Carbamidomethyl (C)){M(Oxidation (M))|F}QY;[Y{M(Oxidation (M))|F}]GAS{I|L}DC(Carbamidomethyl (C)){M(Oxidation (M))|F}QY;[Y{M(Oxidation (M))|F}]QS{I|L}DC(Carbamidomethyl (C)){M(Oxidation (M))|F}QY;{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]QDC(Carbamidomethyl (C)){M(Oxidation (M))|F}YQ;{[TV]|[{I|L}S]}D[NG]W[DG]SEQY;{NN|[MP]|[D{I|L}]|[EV]}[MD][{I|L}P]C(Carbamidomethyl (C))SEQY;[Y{M(Oxidation (M))|F}]GAD{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SQY;{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]QDC(Carbamidomethyl (C)){M(Oxidation (M))|F}AGY;[Y{M(Oxidation (M))|F}]QD{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SQY;[Y{M(Oxidation (M))|F}]GAS{I|L}DC(Carbamidomethyl (C)){M(Oxidation (M))|F}YQ 3.0833;2.8449;2.8044;2.6575;2.5422;2.5229;2.5143;2.4929;2.4737;2.4191 -;-;-;-;-;-;-;-;-;- 3444 + 1 2.158 91486.5 0.8899999856948853 2134 3361 5493 DOHH2_400M_050219_1,5497 DOHH2_400M_050219_1,5497,ESSEYQSYSQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5498 29.806 460.0 259410.0 25 0 15234.0 + 29011 QEDEVMRAY 9 120 570.7521142884068 1139.4896756436135 2 570.7536498904228 MULTI CID FTMS 0 0 0 5493 192086.75 1.0 0 0.0 5 Unmodified _QEDEVMRAY_ ENSG00000111229|ENST00000228825|ARPC3;ENST00000397300.2_1_11:93921617-93921950:-|nuORF 66.45667989310934 0.0225072657982126 1 QEDEVMRAY 9 0 + 81.039 0.0 0.0 7.1118 7.1118 95.816 0.0 0.0 0.0 71.28477292086592 16.478174818886373 16.478174818886373 38.794036548805 0 0.872363747448347 1.154901959985743 0.4247425010840047 0.2396518287104437 + + QEDEVMRAY;QEDVV[WM]AY 7.1118;3.7073 +;- + 241 + 1 2.158 93072.3 1.0 2135 3361 5493 DOHH2_400M_050219_1,5498 DOHH2_400M_050219_1,5498,QEDEVMRAY True True QEDEVMRAY 29.80588 570.753649890423 1022368.1875 5493.0 ENSG00000111229|ENST00000228825|ARPC3;;ENST00000397300.2_1_11:93921617-93921950:-|nuORF 7.392505327860515 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5499 29.812 321.0 573590.0 25 0 36522.0 + 30624 RFKDRIVSM 9 153 384.5500440753178 1150.6283028261537 3 384.5498840212822 MULTI CID FTMS 0 0 0 5493 176954.546875 0.1263433340074565 -2 0.0526199340820312 6 Unmodified _RFKDRIVSM_ ENSG00000101972|ENST00000371145|STAG2;ENSG00000118007|ENST00000383202|STAG1;nc|ENSG00000101972|Q8N3U4|STAG2;nc|ENSG00000118007|Q8WVM7-2|STAG1 27.22323531849824 0.1848086127304535 1 R{I|L}VSM 5 4 41.414 0.0 0.0 3.5993 0.0 0.0 546.2911882189466 0.0 546.2911882189466 0.0 25.74031267727719 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 + R{I|L}VSM 3.5993 + + 114 1 2.158 148074.2 1.0 2136 3361 5493 DOHH2_400M_050219_1,5499 DOHH2_400M_050219_1,5499,RFKDRIVSM False True RFKDRIVSM 29.811703 384.549884021282 18943065.75 5493.0 ENSG00000101972|ENST00000371145|STAG2;;nc|ENSG00000101972|Q8N3U4|STAG2;;nc|ENSG00000118007|Q8WVM7-2|STAG1;;ENSG00000118007|ENST00000383202|STAG1 5.383857727050781 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5500 29.826 800.0 207650.0 25 0 39709.0 + 7985 ELYERAREL 9 146 589.809372724358 1177.604192515516 2 589.8119994997978 MULTI CID FTMS 0 0 0 5493 146372.59375 1.0 0 0.0 7 Unmodified _ELYERAREL_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-3|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 24.99096001346401 0.2132109383330889 1 {I|L}E[YE]R 5 6 49.565 0.0 0.0 4.209 0.0 0.0 0.0 484.2523592584594 484.2523592584594 34.93882771791494 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.805462187404089 {I|L}E[YE]R 4.209 - 518 + 1 2.158 129051.9 0.75 2137 3361 5493 DOHH2_400M_050219_1,5500 DOHH2_400M_050219_1,5500,ELYERAREL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5501 29.839 800.0 209720.0 25 0 11178.0 + 16289 IWAVILTQF 9 155 545.8179632338799 1089.6213735345598 2 545.8169433474541 MULTI CID FTMS 0 0 0 5493 94844.0859375 0.7439359021214231 1 -0.0768508911132812 8 Unmodified _IWAVILTQF_ REV__ENSG00000174373|ENST00000680220|RALGAPA1;REV__ENST00000443361.1_1_9:108283251-108284913:+|nuORF;REV__ENST00000554652.5_1_14:36147090-36221314:-|nuORF;REV__ENST00000554704.5_1_14:36176787-36221314:-|nuORF;REV__nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0|RALGAPA1 15.847184025352805 0.4077185912009129 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P 3 -1 25.722 0.0 0.0 2.3606 0.0 0.0 0.0 729.4250899254379 729.4250899254379 -1.3787421366772357 0.0 -1.3787421366772357 0.0 0 0.0 1.6989700043360187 0.25 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P 2.3606 - 549 1 2.158 130637.2 0.6200000047683716 2138 3361 5493 DOHH2_400M_050219_1,5501 DOHH2_400M_050219_1,5501,IWAVILTQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5502 29.847 431.0 128390.0 25 0 13278.0 + 43575 YADPVNAHY 9 107 525.23799677711 1048.4614406210198 2 525.2374755740166 MULTI CID FTMS 0 0 0 5493 161621.40625 0.2824605878980969 6 -0.433450698852539 9 Unmodified _YADPVNAHY_ ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3;nc|ENSG00000119314|O95758|PTBP3 32.30548876998284 0.1201446275138228 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPV{[QG]|[NA]}HY 9 0 + 59.147 0.0 0.0 5.6413 5.6413 89.483 0.0 0.0 0.0 44.19855913805776 11.25955625825256 11.25955625825256 15.587898540627007 0 0.805462187404089 2.0 0.0 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPV{[QG]|[NA]}HY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPV[PG]DC{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPV{[DS]|[MA]|[CV]|TT}[WP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DP[RP]DC{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[PG]VPD{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[RP]PD{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPV{[WS]|[C(Carbamidomethyl (C)){I|L}]}[DP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPV[WD][PS];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPV[PG]{M(Oxidation (M))|F}[PS];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DP[RP]{M(Oxidation (M))|F}[PS] 5.6413;4.1546;4.14;3.9866;3.8269;3.6589;3.5925;3.5814;3.3862;3.2182 +;-;-;-;-;-;-;-;-;- + 169 + 1 2.158 47427.3 1.0 2139 3361 5493 DOHH2_400M_050219_1,5502 DOHH2_400M_050219_1,5502,YADPVNAHY True True YADPVNAHY 29.847051 525.237475574017 3781333.0 5493.0 ENSG00000119314|ENST00000374257|PTBP3;;nc|ENSG00000119314|O95758-4|PTBP3;;nc|ENSG00000119314|O95758-1|PTBP3;;nc|ENSG00000119314|O95758-5|PTBP3;;nc|ENSG00000119314|O95758-7|PTBP3;;nc|ENSG00000119314|O95758|PTBP3;;nc|ENSG00000119314|O95758-2|PTBP3 7.580844561258952 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5503 29.852 266.0 303440.0 25 0 30359.0 + 6823 EEAQWVRKY 9 110 403.540258715817 1207.598946747651 3 403.5404540896416 MULTI CID FTMS 0 0 0 5493 129782.453125 1.0 0 0.0 10 Unmodified _EEAQWVRKY_ ENSG00000189057|ENST00000343597|FAM111B;nc|ENSG00000189057|Q6SJ93-2|FAM111B 4.5288652416199255 0.7565837746943351 1 Y 1 8 11.99 0.0 0.0 0.99285 0.0 0.0 1026.5247107630792 0.0 1026.5247107630792 0.0 -6.180584922336404 -6.180584922336404 0.0 0 0.0 0.0 0.0 0.0 + Y 0.99285 + + 77 + 1 2.158 64859.9 1.0 2140 3361 5493 DOHH2_400M_050219_1,5503 DOHH2_400M_050219_1,5503,EEAQWVRKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5505 29.857 36.0 1064000.0 25 0 108280.0 + 11194 GENDRGVSF 9 66 490.72496641958696 979.435379905974 2 490.7250854372978 MULTI CID FTMS 0 0 0 5504 1171782.75 0.224105922685761 4 -0.3258228302001953 1 Unmodified _GENDRGVSF_ ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000462832.5_1_2:29006774-29038903:+|nuORF;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532279.1_1_11:67166350-67167062:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC 23.78978130925829 0.2284941198415988 1 S{M(Oxidation (M))|F} 2 7 29.464 0.0 0.0 3.0083 0.0 0.0 727.3238744950667 0.0 727.3238744950667 0.0 0.1548564655519868 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + S{M(Oxidation (M))|F} 3.0083 + + 20 + 1 2.153 35951.8 1.0 2141 3362 5504 DOHH2_400M_050219_1,5505 DOHH2_400M_050219_1,5505,GENDRGVSF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5506 29.865 463.0 242430.0 25 0 28040.0 + 37433 TLDENPGVRY 10 110 582.288041938796 1162.561530944392 2 582.2885009646416 MULTI CID FTMS 0 0 0 5504 171057.359375 0.1567665410854665 5 -0.3565998077392578 2 Unmodified _TLDENPGVRY_ ENSG00000116266|ENST00000370008|STXBP3 69.10491478415734 0.0189654488676922 1 [{I|L}T]DENP[VG]RY 10 0 + 72.898 0.0 0.0 6.2704 6.2704 86.098 0.0 0.0 0.0 60.42342188037523 3.512649075511192 3.512649075511192 6.906140654642812 0 0.9247425010840048 2.0 0.4247425010840047 0.6549471895720985 + + [{I|L}T]DENP[VG]RY;[{I|L}T]{[NV]|[RG]}YNED[VP];[{I|L}T]DEGGP[VG]RY;{[QN]|[E{I|L}]|[KN]}[KG]YNED[VP];[{I|L}T]{[NV]|[RG]}YGGED[VP];[{I|L}T]DEN[RV][PG]Y;{[QN]|[E{I|L}]|[KN]}[KG]YGGED[VP];{NN|[MP]|[D{I|L}]|[EV]}[HK]PNED[VP];[{I|L}T]Y[YE][VG]RY;{NN|[MP]|[D{I|L}]|[EV]}[HK]PGGED[VP] 6.2704;5.6764;5.4821;4.948;4.8881;4.5061;4.1596;3.6831;2.9129;2.8948 +;-;-;-;-;-;-;-;-;- + 257 + 1 2.153 89665.1 1.0 2142 3362 5504 DOHH2_400M_050219_1,5506 DOHH2_400M_050219_1,5506,TLDENPGVRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5507 29.871 348.0 287780.0 25 0 14655.0 + 2247 AQFETKKLY 9 120 564.3077654014899 1126.6009778697796 2 564.3090087771416 MULTI CID FTMS 0 0 0 5504 146859.25 0.4835316162758969 -1 0.0768508911132812 3 Unmodified _AQFETKKLY_ ENSG00000183291|ENST00000331835|SELENOF;ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF 44.391923383255 0.0526658857881241 1 [QA]{M(Oxidation (M))|F}ETKK{I|L}Y 9 0 + 59.324 0.0 0.0 5.2658 5.2658 87.053 0.0 0.0 0.0 25.528871982441352 14.09256854528806 14.09256854528806 11.817496819840656 0 1.774227503252014 0.0 0.7302046884880937 0.0 + + [QA]{M(Oxidation (M))|F}ETKK{I|L}Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AETKK{I|L}Y;[QA]Y[DV]KK{I|L}Y;[KT]KE{M(Oxidation (M))|F}[QA]{I|L}Y;[KT]KE{M(Oxidation (M))|F}{I|L}[QA]Y;[QA]Y[WR]K{I|L}Y;KKTE{M(Oxidation (M))|F}[QA]{I|L}Y;[{M(Oxidation (M))|F}E]TKK[QA]{I|L}Y;KKTE{M(Oxidation (M))|F}{I|L}[QA]Y;[{M(Oxidation (M))|F}E]TKK{I|L}[QA]Y 5.2658;4.2168;3.606;3.2709;3.2041;3.0962;3.049;2.9918;2.9822;2.925 +;-;-;-;-;-;-;-;-;- + 713 + 1 2.153 80042.2 1.0 2143 3362 5504 DOHH2_400M_050219_1,5507 DOHH2_400M_050219_1,5507,AQFETKKLY True True AQFETKKLY 29.871279 564.309008777142 2977976.375 5504.0 ENST00000331835.9_2_1:87346375-87379803:-|nuORF;;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;;nc|ENSG00000183291|O60613-2|SELENOF;;ENSG00000183291|ENST00000331835|SELENOF 6.524871667226155 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5508 29.885 800.0 162550.0 25 0 21049.0 + 43986 YIDEYRNDY 9 128 625.7692623720892 1249.5239718109783 2 625.7690917849541 MULTI CID FTMS 0 0 0 5504 138223.21875 1.0 0 0.0 4 Unmodified _YIDEYRNDY_ ENSG00000013441|ENST00000321356|CLK1;ENST00000473565.5_1_2:201725957-201729352:-|nuORF;ENST00000481641.1_1_2:201725957-201728949:-|nuORF;ENST00000492793.1_1_2:201725957-201729378:-|nuORF;nc|ENSG00000013441|P49759-2|CLK1;nc|ENSG00000013441|P49759-3|CLK1 53.832793166522166 0.0319663582346103 1 Y{I|L}DEY 5 4 73.315 0.0 0.0 5.8675 0.0 0.0 0.0 563.2230929010374 563.2230929010374 57.830918867322296 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.6549471895720985 0.0 + Y{I|L}DEY 5.8675 + + 511 + 1 2.153 100790.1 0.7300000190734863 2144 3362 5504 DOHH2_400M_050219_1,5508 DOHH2_400M_050219_1,5508,YIDEYRNDY True True YIDEYRNDY 29.885117 625.769091784954 753896.5 5504.0 ENST00000473565.5_1_2:201725957-201729352:-|nuORF;;nc|ENSG00000013441|P49759-3|CLK1;;ENSG00000013441|ENST00000321356|CLK1;;nc|ENSG00000013441|P49759-2|CLK1;;ENST00000492793.1_1_2:201725957-201729378:-|nuORF;;ENST00000481641.1_1_2:201725957-201728949:-|nuORF 5.2367197672526045 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5509 29.893 424.0 175210.0 25 0 10263.0 + 29140 QEVETSVTY 9 123 528.2473966587414 1054.4802403842828 2 528.2474853396416 MULTI CID FTMS 0 0 0 5504 132737.375 1.0 0 0.0 5 Unmodified _QEVETSVTY_ ENSG00000103018|ENST00000307892|CYB5B;ENST00000514123.5_1_16:69458586-69482095:+|nuORF 20.453626601364224 0.2830276176381075 1 {[WN]|[YH]}VSTQGTY 9 5 + 43.655 0.0 0.0 4.14 4.14 74.143 0.0 0.0 0.0 18.071968632008435 16.478174818886373 16.478174818886373 2.95880017344075 0 0.0 0.0 0.7614393726401688 0.0 {[WN]|[YH]}VSTQGTY;{[WN]|[YH]}VQ{[MG]|[TS]}GTY;{[WN]|[YH]}V[C(Carbamidomethyl (C))R]GTY;{[WN]|[YH]}VST[AG]GTY;{[WN]|[YH]}V[AG]{[MG]|[TS]}GTY;{[WN]|[YH]}VQ{M(Oxidation (M))|F}[QA]Y;{[WN]|[YH]}VSTS[QA]Y;{[WN]|[YH]}{[ET]|[MV]}[KG]GTY;{[WN]|[YH]}V[AG]{M(Oxidation (M))|F}[QA]Y;{[WN]|[YH]}VQ{M(Oxidation (M))|F}{[QS]|[NT]}{M(Oxidation (M))|F} 4.14;3.8594;3.3418;3.2667;2.9861;2.2375;2.0008;1.6985;1.3591;1.0691 -;-;-;-;-;-;-;-;-;- 451 + 1 2.153 63427.0 1.0 2145 3362 5504 DOHH2_400M_050219_1,5509 DOHH2_400M_050219_1,5509,QEVETSVTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5510 29.902 504.0 248670.0 25 0 14197.0 + 38615 TTESEVMKY 9 151 544.2525842369253 1086.4906155406504 2 544.2534057497978 MULTI CID FTMS 0 0 0 5504 133459.734375 0.6932845474356926 -1 0.0768508911132812 6 Unmodified _TTESEVMKY_ ENSG00000100714|ENST00000652337|MTHFD1;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 36.12702656103203 0.0967173616627612 1 {[DS]|[MA]|[CV]|TT}E{[ES]|[DT]|[{I|L}C]}VMKY 9 0 + 34.816 0.0 0.0 3.2045 3.2045 72.22 0.0 0.0 0.0 3.227525590065764 3.227525590065764 3.227525590065764 3.227525590065764 0 0.4247425010840047 0.0 0.4247425010840047 0.0 + + {[DS]|[MA]|[CV]|TT}E{[ES]|[DT]|[{I|L}C]}VMKY;[VG]{[{M(Oxidation (M))|F}H]|[RQ]}V{[ES]|[DT]|[{I|L}C]}ESP;[PS]QQV{[ES]|[DT]|[{I|L}C]}ESP;[PS]EDVTQQSP;{[DS]|[MA]|[CV]|TT}QQ{[MG]|[TS]}MKY;[PS]EDTVQQSP;[DP]DVTTQQSP;[DP]TDVTQQSP;{[DS]|[MA]|[CV]|TT}E{[ES]|[DT]|[{I|L}C]}V[HT]SP;{[DS]|[MA]|[CV]|TT}E[DP]{[QG]|[NA]}RSP 3.2045;2.9074;2.4683;2.0843;2.0328;1.9417;1.9303;1.7537;1.7007;1.6759 +;-;-;-;-;-;-;-;-;- + 679 + 1 2.153 97906.3 1.0 2146 3362 5504 DOHH2_400M_050219_1,5510 DOHH2_400M_050219_1,5510,TTESEVMKY True True TTESEVMKY 29.90159 544.253405749798 1174158.875 5504.0 ENSG00000100714|ENST00000652337|MTHFD1;;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 6.243154207865397 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5511 29.909 426.0 210880.0 25 0 9221.4 38625 TTFFYYDL 8 136 535.2477685960864 1068.4809842589727 2 535.2499877810478 MULTI CID FTMS 0 0 0 5504 121375.703125 0.8798872509402834 -5 0.1921100616455078 7 Unmodified _TTFFYYDL_ ENSG00000173578|ENST00000309285|XCR1 9.347437153973935 0.7675937258251505 1 MA 2 8 17.959 0.0 0.0 1.6808 0.0 0.0 0.0 863.3604530227009 863.3604530227009 3.3547064036788754 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MA 1.6808 - 241 + 1 2.153 71207.0 1.0 2147 3362 5504 DOHH2_400M_050219_1,5511 DOHH2_400M_050219_1,5511,TTFFYYDL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5512 29.923 800.0 135300.0 25 0 7860.4 + 7269 EETEDYRQF 9 130 608.7594000304406 1215.504247127681 2 608.7581054568291 MULTI CID FTMS 0 0 0 5504 108531.171875 1.0 0 0.0 8 Unmodified _EETEDYRQF_ ENSG00000029363|ENST00000531224|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;nc|ENSG00000029363|Q9NYF8-3|BCLAF1 85.27202061508552 0.0162393975915471 1 EETEDYRQ{M(Oxidation (M))|F} 9 0 + 83.941 0.0 0.0 6.9058 6.9058 90.632 0.0 0.0 0.0 59.411677396591145 11.628939624920704 11.628939624920704 9.208187539523747 0 0.3494850021680094 2.0 0.7302046884880937 1.4604093769761874 + + EETEDYRQ{M(Oxidation (M))|F};EETEDY[VG]Q{M(Oxidation (M))|F};EETEDYR[AG]{M(Oxidation (M))|F};EETED{[TV]|[{I|L}S]}H{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};EETE{M(Oxidation (M))|F}RE[YN];EETEDY[VG][AG]{M(Oxidation (M))|F};[DP]DPR{M(Oxidation (M))|F}ET[HC];EETEH{[CP]|[EA]}PQ{M(Oxidation (M))|F};[PS][HK]YDET[HC];[DP]T[W{I|L}]DET[HC] 6.9058;6.1483;5.897;4.8142;4.3382;4.1928;3.9279;3.9167;3.8934;3.7569 +;-;-;-;-;-;-;-;-;- + 1166 + 1 2.153 82485.2 0.6499999761581421 2148 3362 5504 DOHH2_400M_050219_1,5512 DOHH2_400M_050219_1,5512,EETEDYRQF True True EETEDYRQF 29.923029 608.758105456829 705274.1875 5504.0 nc|ENSG00000029363|Q9NYF8-2|BCLAF1;;ENSG00000029363|ENST00000531224|BCLAF1;;nc|ENSG00000029363|Q9NYF8-3|BCLAF1 8.201807657877604 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5513 29.927 129.0 525000.0 25 0 126710.0 -1 0 78 576.3217014638902 575.3144249972902 1 576.3221313357353 MULTI CID FTMS 0 0 0 5504 343390.46875 0.8993858620423226 -1 0.0768508911132812 9 1 Q 1 -1 10.089 0.0 0.0 1.7536 0.0 0.0 429.2446598379136 0.0 429.2446598379136 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 1.7536 - 4 + 1 2.153 55549.8 1.0 2149 3362 5504 DOHH2_400M_050219_1,5513 DOHH2_400M_050219_1,5513, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5514 29.929 101.0 740040.0 25 0 196490.0 + + 27999 MPMKVKQL 8 95 487.2785596117625 972.542566290325 2 487.7794677615166 MULTI CID FTMS 0 0 0 5504 295766.09375 0.3464503763562681 -8 0.3411273956298828 10 Unmodified _PMKPFLIQ_ ENSG00000155561|ENST00000285968|NUP205 14.581692164780916 0.6954967302934248 1 PMKVKQ{I|L} 7 -1 27.605 0.0 0.0 2.8384 0.0 0.0 130.03692760512234 0.0 130.03692760512234 0.0 14.840460301738045 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 PMKVKQ{I|L} 2.8384 - 163 + 1 2.153 61247.6 1.0 2150 3362 5504 DOHH2_400M_050219_1,5514 DOHH2_400M_050219_1,5514,PMKPFLIQ False False MPMKVKQL 29.929023 487.779467761517 7600029.5 5504.0 ENSG00000155561|ENST00000285968|NUP205 6.7821855545043945 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5515 29.943 800.0 320430.0 25 0 28046.0 -1 0 84 996.3037117301676 4976.482176317837 5 996.7048217654228 MULTI CID FTMS 0 0 0 5504 233086.453125 1.0 0 0.0 11 1 NE 2 -1 25.217 0.0 0.0 0.50671 0.0 0.0 1869.9340156730264 2860.400200051287 4730.334215724313 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 NE 0.50671 - 75 + 1 2.153 166153.8 0.7099999785423279 2151 3362 5504 DOHH2_400M_050219_1,5515 DOHH2_400M_050219_1,5515, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5516 29.945 111.0 460160.0 25 0 37269.0 + 29244 QGYGRVNVV 9 95 496.270126527589 0 496.2695190310478 PEAK CID FTMS 0 0 0 5504 167909.21875 0.4690159062801804 -1 0.0768508911132812 12 Unmodified _QGYGRVNVV_ ENSG00000271601|ENST00000604000|LIX1L 26.88365393820708 0.1386685954232994 1 VN{M(Oxidation (M))|F} 3 7 10.177 0.0 0.0 1.0275 0.0 0.0 134.1089653581094 493.2067659967407 627.3157313548501 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VN{M(Oxidation (M))|F} 1.0275 - 72 + 1 2.153 46450.7 1.0 2152 3362 5504 DOHH2_400M_050219_1,5516 DOHH2_400M_050219_1,5516,QGYGRVNVV False True QGYGRVNVV 29.945206 496.269519031048 1941827.0 5504.0 ENSG00000271601|ENST00000604000|LIX1L 3.1435662508010864 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5517 29.948 135.0 500870.0 25 0 35903.0 + 28816 QAAERLLWAA 10 97 376.8754935963203 0 376.8755370974541 PEAK CID FTMS 0 0 0 5504 155861.453125 0.518668003451709 -1 0.0768508911132812 13 Unmodified _QAAERLLWAA_ REV__nc|ENSG00000020219|A6NM43|CCT8L1P 9.243775137331635 0.3805505394612098 1 QE 2 -1 12.435 0.0 0.0 1.6542 0.0 0.0 375.5696689779938 116.0510729425414 491.6207419205352 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 QE 1.6542 - 45 + 1 2.153 56496.5 1.0 2153 3362 5504 DOHH2_400M_050219_1,5517 DOHH2_400M_050219_1,5517,QAAERLLWAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5519 29.955 216.0 473550.0 25 0 110810.0 37527 TLHPVWSQQ 9 120 548.282761396406 1094.550969859612 2 548.2832519412041 MULTI CID FTMS 0 0 0 5518 234040.328125 0.1879009644522928 13 -0.6436538696289062 1 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 16.565877749689598 0.3882643987948875 1 EHPPEH[HK] 8 7 47.093 0.0 0.0 4.3025 0.0 0.0 85.08983046699375 0.0 85.08983046699375 0.0 30.39742379213392 0.0 0.0 0 2.110924374808178 0.0 0.7134679910804405 0.0 EHPPEH[HK] 4.3025 - 553 1 2.153 84047.7 1.0 2154 3363 5518 DOHH2_400M_050219_1,5519 DOHH2_400M_050219_1,5519,TLHPVWSQQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5520 29.96 308.0 296900.0 25 0 48653.0 -1 0 112 414.255182057291 413.247905590691 1 415.2543212771416 MULTI CID FTMS 0 0 0 5518 154543.546875 0.0772296832601232 14 -0.6959457397460938 2 1 {I|L} 1 -1 10.089 0.0 0.0 2.4413 0.0 0.0 282.1529176529941 0.0 282.1529176529941 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.4413 - 13 + 1 2.153 76558.7 1.0 2155 3363 5518 DOHH2_400M_050219_1,5520 DOHH2_400M_050219_1,5520, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5521 29.962 58.0 1017900.0 25 0 107230.0 + 8598 EVAKTQAL 8 94 430.2477069704405 858.480861007681 2 430.2477294802666 MULTI CID FTMS 0 0 0 5518 884962.5 0.4802236797613431 -1 0.0961589813232421 3 Unmodified _EVAKTQAL_ ENSG00000141569|ENST00000269383|TRIM65 30.63653989081413 0.3996269429323407 1 {NN|[MP]|[D{I|L}]|[EV]}[KA]TQA{I|L} 8 0 + 40.34 0.0 0.0 4.699 4.699 84.125 0.0 0.0 0.0 11.020599913279618 9.419628234359578 9.419628234359578 9.262137858390812 0 1.274227503252014 2.0 0.3494850021680094 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}[KA]TQA{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]T[AG]A{I|L};{[TV]|[{I|L}S]}QVTQA{I|L};{[TV]|[{I|L}S]}[AG]VTQA{I|L};{[TV]|[{I|L}S]}QVT[AG]A{I|L};{[TV]|[{I|L}S]}[AG]VT[AG]A{I|L};[WK][WR]A{I|L} 4.699;3.6201;3.4152;2.3364;2.3364;1.2637;0.6578 +;-;-;-;-;-;- + 125 1 2.153 50281.5 1.0 2156 3363 5518 DOHH2_400M_050219_1,5521 DOHH2_400M_050219_1,5521,EVAKTQAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5522 29.963 79.0 727060.0 25 0 103250.0 + 6420 EAANKVVL 8 90 422.2504238823991 842.4862948315981 2 422.2503234744072 MULTI CID FTMS 0 0 0 5518 700079.625 0.642556003572664 -1 0.0961589813232421 4 Unmodified _EAANKVVL_ ENSG00000169019|ENST00000381571|COMMD8 32.116972079565 0.368454113111938 1 V{I|L} 2 6 24.464 0.0 0.0 2.9038 0.0 0.0 612.3227949310107 0.0 612.3227949310107 0.0 7.240830505375868 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + V{I|L} 2.9038 + + 174 + 1 2.153 50385.9 1.0 2157 3363 5518 DOHH2_400M_050219_1,5522 DOHH2_400M_050219_1,5522,EAANKVVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5523 29.966 142.0 568310.0 25 0 60369.0 + 481 AEGIHTGQF 9 118 480.2327174496331 958.4508819660664 2 480.2331420779228 MULTI CID FTMS 0 0 0 5518 383055.84375 0.1297486524450583 -2 0.1730098724365234 5 Unmodified _AEGIHTGQF_ ENSG00000161016|ENST00000528957|RPL8;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;ENST00000531767.1_1_8:146017155-146017514:-|nuORF 71.92227651296345 0.0203558744033348 1 {[HG]|PP}{I|L}TGQAE{M(Oxidation (M))|F} 9 5 + 50.728 0.0 0.0 5.2927 5.2927 75.647 0.0 0.0 0.0 1.0264573313348535 14.973024840566469 1.0264573313348535 1.0264573313348535 0 0.3807196863200844 0.0 0.8807196863200843 0.2742275032520141 {[HG]|PP}{I|L}TGQAE{M(Oxidation (M))|F};[TA][HV]GQAE{M(Oxidation (M))|F};{[HG]|PP}{I|L}TGQEA{M(Oxidation (M))|F};[TA][HV]GQEA{M(Oxidation (M))|F};[TA][HN]G{I|L}AE{M(Oxidation (M))|F};[TA][HN]G{I|L}EA{M(Oxidation (M))|F};[HT]{[VA]|[{I|L}G]}GQAE{M(Oxidation (M))|F};{[CP]|[EA]}[HK]QAE{M(Oxidation (M))|F};{[HG]|PP}{I|L}TG[AG]AE{M(Oxidation (M))|F};[HT]{[VA]|[{I|L}G]}GQEA{M(Oxidation (M))|F} 5.2927;5.1856;4.9658;4.8587;4.7366;4.4096;4.3485;4.0904;4.0459;4.0215 -;-;-;-;-;-;-;-;-;- 1376 1 2.153 66546.6 1.0 2158 3363 5518 DOHH2_400M_050219_1,5523 DOHH2_400M_050219_1,5523,AEGIHTGQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5524 29.971 261.0 419460.0 25 0 30297.0 + 10448 FTEQYNEQY 9 125 611.2569301361377 0 611.2570678591728 PEAK CID FTMS 0 0 0 5518 378719.65625 0.3035011461842742 -2 0.1730098724365234 6 Unmodified _FTEQYNEQY_ ENSG00000173914|ENST00000310046|RBM4B 103.74828524460852 0.0193069612272731 1 ENY{M(Oxidation (M))|F}TE 6 7 52.537 0.0 0.0 4.3046 0.0 0.0 309.1318889814566 125.0358370416625 434.1677260231191 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 2.135151878060192 0.9247425010840048 ENY{M(Oxidation (M))|F}TE 4.3046 - 1451 + 1 2.153 87643.8 1.0 2159 3363 5518 DOHH2_400M_050219_1,5524 DOHH2_400M_050219_1,5524,FTEQYNEQY True True FTEQYNEQY 29.971189 611.257067859173 8542770.0 5518.0 ENSG00000173914|ENST00000310046|RBM4B 7.467588742574056 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5525 29.975 195.0 356500.0 25 0 24888.0 + 24206 MAHAVTQL 8 99 435.729135999646 869.4437190660921 2 435.7284728884697 MULTI CID FTMS 0 0 0 5518 208126.953125 1.0 0 0.0 7 Unmodified _MAHAVTQL_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 22.4526382665184 0.5719518724627818 1 [HA]MAVTQ{I|L} 8 2 + 29.786 0.0 0.0 3.4259 3.4259 81.716 0.0 0.0 0.0 3.979400086720375 14.301915820410684 3.979400086720375 13.802112417116062 0 0.3182503180159344 0.0 0.5 0.0 [HA]MAVTQ{I|L};[VP]EGVEQ{I|L};[VP]E[PS]TQ{I|L};[Q{I|L}][HM]TQ{I|L};[PA][DV]VEQ{I|L};[NP][RN]EQ{I|L} 3.4259;1.8385;1.8181;1.0808;0.66393;0.36391 -;-;-;-;-;- 109 1 2.153 60182.4 1.0 2160 3363 5518 DOHH2_400M_050219_1,5525 DOHH2_400M_050219_1,5525,MAHAVTQL False True MAHAVTQL 29.974927 435.72847288847 1008546.875 5518.0 nc|ENSG00000166226|P78371-2|CCT2;;ENSG00000166226|ENST00000299300|CCT2 7.137062390645345 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5526 29.989 800.0 208050.0 25 0 12121.0 + + -1 ITDPSLSKTDSY 12 161 663.8262035934329 0 663.8254882693291 PEAK CID FTMS 0 0 0 5518 189543.9375 1.0 0 0.0 8 Oxidation (M) _LTDSLALHFM(Oxidation (M))Y_ ENST00000471232.5_1_2:32750532-32815924:+|nuORF;ENSG00000115760|ENST00000421745|BIRC6 34.40172386719151 0.1843838221482756 1 TDPS{I|L}{[C(Carbamidomethyl (C))G]|[NC]}S{I|L}{M(Oxidation (M))|F} 10 -1 68.145 0.0 0.0 5.1405 0.0 0.0 113.08487437666174 132.04563318424064 245.1305075609024 0.0 0.0 0.0 0.0 0 1.7856668758921828 0.0 1.3996498648046138 0.3807196863200844 TDPS{I|L}{[C(Carbamidomethyl (C))G]|[NC]}S{I|L}{M(Oxidation (M))|F} 5.1405 - 5252 + 1 2.153 127876.0 0.7900000214576721 2161 3363 5518 DOHH2_400M_050219_1,5526 DOHH2_400M_050219_1,5526,LTDSLALHFMY False False ITDPSLSKTDSY 29.988762 663.825488269329 1592230.125 5518.0 ENST00000471232.5_1_2:32750532-32815924:+|nuORF;;ENSG00000115760|ENST00000421745|BIRC6 6.800117651621501 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5527 29.997 439.0 414250.0 25 0 78445.0 + 38763 TVDARVYSY 9 147 537.2671532488682 1072.5197535645364 2 537.2670776247978 MULTI CID FTMS 0 0 0 5518 169951.59375 0.3365014314355991 -1 0.0961589813232421 9 Unmodified _TVDARVYSY_ ENSG00000165609|ENST00000491614|NUDT5;ENST00000378952.7_1_10:12209703-12222485:-|nuORF 59.05245873256422 0.0266066919017776 1 TVDARVYSY 9 0 + 91.14 0.0 0.0 8.4977 8.4977 85.867 0.0 0.0 0.0 66.44705544885765 14.092568545288046 14.092568545288046 2.741822736656588 0 2.637591837382481 2.0 0.6382104921644451 0.0 + + TVDARVYSY;TVDA[YV]RSY;TVY{[RE]|[WV]}RSY;{[TV]|[{I|L}S]}DARVYSY;{[TV]|[{I|L}S]}{[NV]|[RG]}EVYSY;TVY{[RE]|[WV]}[VS]GY;TV{[QC]|[C(Carbamidomethyl (C))A]}VT[Y{I|L}]{M(Oxidation (M))|F};TVDA{[YC]|[HE]}[RV]{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{[NV]|[RG]}YD{I|L}SY;TVW[YV][VS]GY 8.4977;8.2421;7.8658;6.1711;5.1976;5.1666;4.8431;4.7611;4.7528;4.6541 +;-;-;+;-;-;-;-;-;- + 1051 + 1 2.153 140892.0 1.0 2162 3363 5518 DOHH2_400M_050219_1,5527 DOHH2_400M_050219_1,5527,TVDARVYSY True True TVDARVYSY 29.996581 537.267077624798 2567962.0 5518.0 ENSG00000165609|ENST00000491614|NUDT5;;ENST00000378952.7_1_10:12209703-12222485:-|nuORF 5.648925145467122 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5528 30.008 651.0 119470.0 25 0 5694.1 + 35218 SSDPERDEPC 10 126 567.7210838980556 1133.427614862911 2 567.7206909060478 MULTI CID FTMS 0 0 0 5518 121043.671875 1.0 0 0.0 10 Unmodified _SSDPERDEPC_ REV__ENSG00000181026|ENST00000332810|AEN;REV__ENST00000557927.1_1_15:89172339-89173522:+|nuORF;REV__nc|ENSG00000181026|Q8WTP8-2|AEN 10.823927491677226 0.6659270209832991 1 [YT]VQSAPD 8 -1 39.779 0.0 0.0 3.5096 0.0 0.0 0.0 269.0145648963673 269.0145648963673 25.175194249891103 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.4247425010840047 0.5 [YT]VQSAPD 3.5096 - 1133 1 2.153 65322.7 1.0 2163 3363 5518 DOHH2_400M_050219_1,5528 DOHH2_400M_050219_1,5528,SSDPERDEPC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5529 30.014 320.0 616170.0 25 0 34939.0 + 682 AEMQWKRDY 9 129 409.525567207462 1225.554872222586 3 409.5253784060478 MULTI CID FTMS 0 0 0 5518 111195.6328125 0.0801898763246137 -2 0.1730098724365234 11 Unmodified _AEMQWKRDY_ ENSG00000140990|ENST00000268668|NDUFB10;nc|ENSG00000140990|O96000-2|NDUFB10 72.96794272382148 0.0199516581995792 1 AEMQWKRDY 9 0 + 94.448 0.0 0.0 7.7066 7.7066 89.709 0.0 0.0 0.0 34.97302484056647 7.271212547196626 7.271212547196626 7.271212547196626 0 0.3807196863200844 2.0 1.4005149978319906 1.2302046884880935 + + AEMQWKRDY;AEMQWKY[RD];AEM[AG]WKRDY;AEMQWYK[RD];AEM[AG]WKY[RD];AEMQYWK[RD];AEMYQWK[RD];AEM[AG]WYK[RD];AEM[AG]YWK[RD];AEYMQWK[RD] 7.7066;7.1133;6.9552;6.543;6.3619;6.3228;5.8305;5.7916;5.5715;5.324 +;-;-;-;-;-;-;-;-;- + 1587 + 1 2.153 156677.3 1.0 2164 3363 5518 DOHH2_400M_050219_1,5529 DOHH2_400M_050219_1,5529,AEMQWKRDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5530 30.02 260.0 151380.0 25 0 12768.0 + 36772 TEEALQQAM 9 83 510.7368758016253 1019.4591986700506 2 510.7372009158134 MULTI CID FTMS 0 0 0 5518 101699.359375 0.8856405129747942 -1 0.0961589813232421 12 Unmodified _TEEALQQAM_ REV__ENSG00000178209|ENST00000345136|PLEC;REV__nc|ENSG00000178209|Q15149-2|PLEC;REV__nc|ENSG00000178209|Q15149-3|PLEC;REV__nc|ENSG00000178209|Q15149-5|PLEC;REV__nc|ENSG00000178209|Q15149-6|PLEC;REV__nc|ENSG00000178209|Q15149-7|PLEC;REV__nc|ENSG00000178209|Q15149-8|PLEC;REV__nc|ENSG00000178209|Q15149-9|PLEC;REV__nc|ENSG00000178209|Q15149|PLEC 7.910154910731844 0.6385446671287552 1 TM 2 -1 20.969 0.0 0.0 2.0569 0.0 0.0 769.3601903786293 0.0 769.3601903786293 0.0 6.365006360318688 0.0 0.0 0 0.0 0.0 0.0 0.0 TM 2.0569 - 128 + 1 2.153 37353.0 1.0 2165 3363 5518 DOHH2_400M_050219_1,5530 DOHH2_400M_050219_1,5530,TEEALQQAM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5531 30.024 245.0 276160.0 25 0 20144.0 + 5346 DLHKKPFL 8 113 499.29401282278167 996.5734727123634 2 499.2949706912041 MULTI CID FTMS 0 0 0 5518 83853.5 1.0 0 0.0 13 Unmodified _DLHKKPFL_ ENSG00000132182|ENST00000254508|NUP210 30.22481116460888 0.4082965392918993 1 {NN|[MP]|[D{I|L}]|[EV]}HKKP{M(Oxidation (M))|F}{I|L} 8 0 {NN|[MP]|[D{I|L}]|[EV]} + + 14.857 15.506 6.7978 1.4908 1.4908 48.546 0.0 0.0 0.0 0.0 7.9511762760958336 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}HKKP{M(Oxidation (M))|F}{I|L} 1.4908 + + 59 + 1 2.153 57970.3 1.0 2166 3363 5518 DOHH2_400M_050219_1,5531 DOHH2_400M_050219_1,5531,DLHKKPFL False True DLHKKPFL 30.024301 499.294970691204 692702.4375 5518.0 ENSG00000132182|ENST00000254508|NUP210 3.2060248057047525 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5532 30.028 193.0 309830.0 25 0 62137.0 + 6797 EEAPPATQNF 10 80 552.2532467537583 0 552.2527343630791 PEAK CID FTMS 0 0 0 5518 118049.6171875 1.0 0 0.0 14 Unmodified _EEAPPATQNF_ ENSG00000119383|ENST00000393370|PTPA;nc|ENSG00000119383|Q15257-3|PTPA;nc|ENSG00000119383|Q15257-4|PTPA;nc|ENSG00000119383|Q15257|PTPA 18.1463463914782 0.3130158145628772 1 {M(Oxidation (M))|F}{I|L} 2 10 6.1979 0.0 0.0 0.56217 0.0 0.0 580.2870588377915 259.07196985416255 839.3590286919541 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L} 0.56217 - 13 + 1 2.153 51786.6 1.0 2167 3363 5518 DOHH2_400M_050219_1,5532 DOHH2_400M_050219_1,5532,EEAPPATQNF False True EEAPPATQNF 30.028016 552.252734363079 984349.25 5518.0 ENSG00000119383|ENST00000393370|PTPA;;nc|ENSG00000119383|Q15257-3|PTPA;;nc|ENSG00000119383|Q15257|PTPA;;nc|ENSG00000119383|Q15257-4|PTPA 0.8906049331029257 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5533 30.035 413.0 345450.0 25 0 73506.0 21734 LPLVRLLLHH 10 130 404.2642077556845 0 404.2643615603447 PEAK CID FTMS 0 0 0 5518 108041.1953125 0.8329769855574195 -1 0.0961589813232421 15 Unmodified _LPLVRLLLHH_ ENSG00000155903|ENST00000286364|RASA2;nc|ENSG00000155903|Q15283|RASA2 0.776531954647913 0.3961065659209837 1 P 1 9 6.9897 0.0 0.0 0.86666 0.0 0.0 112.1006975751131 594.3369637738249 706.437661348938 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.86666 + + 9 + 1 2.153 114222.1 1.0 2168 3363 5518 DOHH2_400M_050219_1,5533 DOHH2_400M_050219_1,5533,LPLVRLLLHH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5535 30.04 22.0 1326600.0 25 0 73140.0 + 26430 NTDSPLRY 8 62 483.2379802313025 964.461407529405 2 483.7392761111259 MULTI CID FTMS 0 0 0 5534 1157837.25 0.0643332840301455 5 -0.2154273986816406 1 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 37.97399986684836 0.2681860861828418 1 {[QS]|[NT]}DSP{I|L}[YR] 8 0 + 52.906 0.0 0.0 5.4856 5.4856 91.254 0.0 0.0 0.0 45.60402823752675 10.24227503252014 10.24227503252014 52.906075122407685 0 0.4247425010840047 2.0 0.0 0.3252574989159953 + + {[QS]|[NT]}DSP{I|L}[YR] 5.4856 + + 52 + 1 2.157 28088.6 1.0 2169 3364 5534 DOHH2_400M_050219_1,5535 DOHH2_400M_050219_1,5535,NTDSPLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5536 30.043 157.0 580870.0 25 0 56994.0 + 32815 SEFPGAQHY 9 106 518.230092929454 1034.445632925708 2 518.2305175662041 MULTI CID FTMS 0 0 0 5534 298520.75 0.9799266460176936 1 -0.0695476531982421 2 Unmodified _SEFPGAQHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000566509.5_1_15:73052730-73067416:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-5|ADPGK 19.256988751693697 0.3154191944385105 1 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[QA]NW 9 2 + 30.864 0.0 0.0 2.9836 2.9836 67.773 0.0 0.0 0.0 7.147642715192507 5.314789170422554 5.314789170422554 0.4575749056067515 0 0.5 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[QA]NW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PQQNW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[DP]TW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[QA]HY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}YP{[ET]|[MV]}Y;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PQQHY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[QA]GGW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PQQGGW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG{[WT]|[RM]}[DP];{[ES]|[DT]|[{I|L}C]}[WD][KA]NW 2.9836;2.9394;2.8682;2.4698;2.4298;2.4256;2.0934;2.044;1.6753;1.4177 -;-;-;+;-;-;-;-;-;- + 205 + 1 2.157 74172.5 1.0 2170 3364 5534 DOHH2_400M_050219_1,5536 DOHH2_400M_050219_1,5536,SEFPGAQHY False True SEFPGAQHY 30.043278 518.230517566204 11599354.5 5534.0 ENST00000567941.5_1_15:73044684-73075795:-|nuORF;;ENSG00000159322|ENST00000456471|ADPGK;;nc|ENSG00000159322|Q9BRR6-2|ADPGK;;nc|ENSG00000159322|Q9BRR6-5|ADPGK;;ENST00000566509.5_1_15:73052730-73067416:-|nuORF 6.935891628265381 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5537 30.044 24.0 1886800.0 25 0 143420.0 + 26431 NTDSPLRY 8 72 483.2379802313025 964.461407529405 2 483.2379638552666 MULTI CID FTMS 0 0 0 5534 2228956.75 0.0625375541231088 4 -0.2077655792236328 3 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 30.63653989081413 0.3996269429323407 1 {[QS]|[NT]}DSP{I|L}RY 8 0 + 55.851 0.0 0.0 5.7909 5.7909 92.464 0.0 0.0 0.0 44.59232785116267 9.463950151760656 9.463950151760656 55.85138771613167 0 0.4247425010840047 2.0 0.0 0.0 + + {[QS]|[NT]}DSP{I|L}RY 5.7909 + + 68 + 1 2.157 41602.9 1.0 2171 3364 5534 DOHH2_400M_050219_1,5537 DOHH2_400M_050219_1,5537,NTDSPLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5538 30.046 63.0 878220.0 25 0 80942.0 + 19215 LEGNPDTHSW 10 87 578.2566357593115 1154.498718585423 2 578.2573730349541 MULTI CID FTMS 0 0 0 5534 807198.625 0.2570371891763658 -2 0.1835784912109375 4 Unmodified _LEGNPDTHSW_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 70.33199760932243 0.018925923965799 1 {I|L}EGNPDTHSW 10 0 + 85.786 0.0 0.0 7.4306 7.4306 90.063 0.0 0.0 0.0 60.78891943966384 10.356668758921828 10.356668758921828 8.62756757724155 0 1.024227503252014 2.0 1.5189301784845295 0.0 + + {I|L}EGNPDTHSW;{I|L}EGNPD[NP]NW;{I|L}EGNPYYNW;{I|L}EG{M(Oxidation (M))|F}SV{[QC]|[C(Carbamidomethyl (C))A]}SW;{I|L}E[YQ]V{[QC]|[C(Carbamidomethyl (C))A]}SW;{I|L}EG{M(Oxidation (M))|F}GN{[QD]|[EN]|[WG]|[KD]|[RS]}[{M(Oxidation (M))|F}E];{I|L}E{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}N{[QD]|[EN]|[WG]|[KD]|[RS]}[{M(Oxidation (M))|F}E];{I|L}{M(Oxidation (M))|F}WSV[C(Carbamidomethyl (C))C]{I|L}Q;{[QN]|[E{I|L}]|[KN]}GN[Y{M(Oxidation (M))|F}][NG]E{I|L};{[QN]|[E{I|L}]|[KN]}GN[CS][YQ]E{I|L} 7.4306;6.6833;5.4198;5.2476;4.705;4.0787;3.5361;3.4443;3.2146;3.1064 +;-;-;-;-;-;-;-;-;- + 1094 + 1 2.157 46965.7 1.0 2172 3364 5534 DOHH2_400M_050219_1,5538 DOHH2_400M_050219_1,5538,LEGNPDTHSW True True LEGNPDTHSW 30.045999 578.257373034954 34859280.0 5534.0 nc|ENSG00000143569|Q14157-1|UBAP2L;;nc|ENSG00000143569|Q14157-4|UBAP2L;;nc|ENSG00000143569|Q14157-5|UBAP2L;;nc|ENSG00000143569|Q14157-3|UBAP2L;;ENSG00000143569|ENST00000428931|UBAP2L 10.17015552520752 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5539 30.049 172.0 477020.0 25 0 33061.0 + 683 AEMQWKRDY 9 71 613.7845992771762 1225.5546456211523 2 613.7848388552666 MULTI CID FTMS 0 0 0 5534 372433.34375 0.6025449643706808 -1 0.0874195098876953 5 Unmodified _AEMQWKRDY_ ENSG00000140990|ENST00000268668|NDUFB10;nc|ENSG00000140990|O96000-2|NDUFB10 37.07464296494664 0.0915153923251136 1 {[CP]|[EA]}MQWK[RD]Y 9 0 {[CP]|[EA]} + + 51.815 5.2288 2.6134 4.2279 4.2279 53.933 0.0 0.0 0.0 0.0 30.61706352137996 0.0 0.0 0 1.7614393726401687 0.0 0.0 0.8494850021680094 + + {[CP]|[EA]}MQWK[RD]Y 4.2279 + + 211 + 1 2.157 67084.0 1.0 2173 3364 5534 DOHH2_400M_050219_1,5539 DOHH2_400M_050219_1,5539,AEMQWKRDY True True AEMQWKRDY 30.04937 613.784838855267 10787228.25 5534.0 nc|ENSG00000140990|O96000-2|NDUFB10;;ENSG00000140990|ENST00000268668|NDUFB10 7.229428132375081 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5540 30.052 158.0 425740.0 25 0 24485.0 + 6183 DTDYRSMEY 9 85 590.2346598782802 1178.4547668233604 2 590.2352783083916 MULTI CID FTMS 0 0 0 5534 315180.90625 0.3542407537400647 -2 0.1835784912109375 6 Unmodified _DTDYRSMEY_ ENSG00000004534|ENST00000266022|RBM6;nc|ENSG00000004534|P78332-3|RBM6 67.83816525789305 0.0219346420158844 1 {[ES]|[DT]|[{I|L}C]}DYRMSEY 9 2 + 49.478 0.0 0.0 4.1985 4.1985 74.666 0.0 0.0 0.0 4.232712163289278 38.50887809210043 4.232712163289278 3.0102999566398125 0 1.8182503180159344 0.0 1.0994850021680094 0.0 {[ES]|[DT]|[{I|L}C]}DYRMSEY;{[ES]|[DT]|[{I|L}C]}DYRSMEY;{[ES]|[DT]|[{I|L}C]}DY[C(Carbamidomethyl (C))K]{[QS]|[NT]}Y;{[{M(Oxidation (M))|F}C]|[YS]}{[WT]|[RM]}EDSEY;{[MS]|[{M(Oxidation (M))|F}A]}[YR]EDSEY;{[{M(Oxidation (M))|F}C]|[YS]}{[WT]|[RM]}EAMEY;{[ES]|[DT]|[{I|L}C]}DY{M(Oxidation (M))|F}{[WT]|[RM]}[MT];[YE]{[ET]|[MV]}QMSEY;{[ES]|[DT]|[{I|L}C]}DY{M(Oxidation (M))|F}[YR]{[CP]|[EA]};[YE]{[ET]|[MV]}QSMEY 4.1985;3.9431;3.4615;3.171;2.9544;2.9156;2.7634;2.7423;2.5468;2.4869 -;+;-;-;-;-;-;-;-;- + 456 1 2.157 53842.4 1.0 2174 3364 5534 DOHH2_400M_050219_1,5540 DOHH2_400M_050219_1,5540,DTDYRSMEY True True DTDYRSMEY 30.052497 590.235278308392 9072673.0 5534.0 ENSG00000004534|ENST00000266022|RBM6;;nc|ENSG00000004534|P78332-3|RBM6 8.623507817586264 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5541 30.056 210.0 290530.0 25 0 31258.0 + 407 AEEDPAHAF 9 106 493.7145526140839 985.4145522949678 2 493.7143127322197 MULTI CID FTMS 0 0 0 5534 138452.515625 0.686550584535196 2 -0.1422443389892578 7 Unmodified _AEEDPAHAF_ ENSG00000170145|ENST00000304987|SIK2 18.13498045792455 0.3457906370836843 1 W 1 9 13.099 0.0 0.0 1.3293 0.0 0.0 781.3243556170366 0.0 781.3243556170366 0.0 -4.921525057367408 -4.921525057367408 0.0 0 0.0 0.0 0.0 0.0 W 1.3293 - 186 + 1 2.157 50860.3 1.0 2175 3364 5534 DOHH2_400M_050219_1,5541 DOHH2_400M_050219_1,5541,AEEDPAHAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5542 30.07 800.0 236270.0 25 0 17700.0 + 321 AEAEKTFSY 9 194 523.2455553846768 1044.4765578361537 2 523.2451660037041 MULTI CID FTMS 0 0 0 5534 128333.53125 0.1302486999941705 -3 0.2604293823242187 8 Unmodified _AEAEKTFSY_ ENSG00000196655|ENST00000533632|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889505-118889751:+|nuORF;nc|ENSG00000196655|Q9Y296-2|TRAPPC4 45.739877483867886 0.0497104363764649 1 AEAE{[QS]|[NT]}T 7 4 64.997 0.0 0.0 6.223 0.0 0.0 0.0 325.1525057428344 325.1525057428344 45.048954067622304 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.805462187404089 0.4247425010840047 AEAE{[QS]|[NT]}T 6.223 - 2562 + 1 2.157 142482.5 0.6000000238418579 2176 3364 5534 DOHH2_400M_050219_1,5542 DOHH2_400M_050219_1,5542,AEAEKTFSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5543 30.075 262.0 358030.0 25 0 47034.0 + 40725 VLHVKTESL 9 119 513.3034818585413 1024.5924107838823 2 513.3035156130791 MULTI CID FTMS 0 0 0 5534 116648.03125 1.0 0 0.0 9 Unmodified _VLHVKTESL_ ENSG00000213676|ENST00000375203|ATF6B;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B 16.149105407346934 0.3995459350917656 1 V{I|L}HV 4 5 54.302 0.0 0.0 5.2998 0.0 0.0 0.0 573.2871798150999 573.2871798150999 42.8816843419429 0.0 0.0 0.0 0 0.7134679910804405 1.5228787452803376 0.0 0.0 + V{I|L}HV 5.2998 + + 182 + 1 2.157 77688.0 1.0 2177 3364 5534 DOHH2_400M_050219_1,5543 DOHH2_400M_050219_1,5543,VLHVKTESL False True VLHVKTESL 30.07518 513.303515613079 472867.09375 5534.0 ENSG00000213676|ENST00000375203|ATF6B;;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;;nc|ENSG00000213676|Q99941-2|ATF6B 4.874466896057129 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5544 30.083 448.0 207310.0 25 0 17966.0 + 25729 NIKQKMQEL 9 132 566.3137407631204 1130.6129285930408 2 566.3135864138603 MULTI CID FTMS 0 0 0 5534 104497.9375 0.6409413590333402 -1 0.0874195098876953 10 Unmodified _NIKQKMQEL_ ENSG00000011426|ENST00000265748|ANLN;nc|ENSG00000011426|Q9NQW6-2|ANLN 88.95385435242217 0.0153473310052057 1 {[QV]|[N{I|L}]|[RA]|[KV]}KQV[C(Carbamidomethyl (C))K]E{I|L} 9 3 + 64.622 0.0 0.0 5.7157 5.7157 79.316 0.0 0.0 0.0 49.6907834621796 9.115452045203952 9.115452045203952 2.498774732165998 0 1.1549471895720984 2.0 1.0994850021680094 0.7059771852360797 {[QV]|[N{I|L}]|[RA]|[KV]}KQV[C(Carbamidomethyl (C))K]E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KQVG[KC]E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K[YE][HK]S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KQVG{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K[AG]V[C(Carbamidomethyl (C))K]E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K[AG]VG[KC]E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KQV[KT][WD];{[QV]|[N{I|L}]|[RA]|[KV]}KQ[KP]{[CT]|[{M(Oxidation (M))|F}G]}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KQV[WK]C{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K{[{M(Oxidation (M))|F}H]|[RQ]}[KC]E{I|L} 5.7157;5.4946;5.1109;5.0975;4.9012;4.6841;4.5251;4.504;4.1854;3.993 -;-;-;-;-;-;-;-;-;- 492 + 1 2.157 73292.4 1.0 2178 3364 5534 DOHH2_400M_050219_1,5544 DOHH2_400M_050219_1,5544,NIKQKMQEL True True NIKQKMQEL 30.083143 566.31358641386 811742.75 5534.0 ENSG00000011426|ENST00000265748|ANLN;;nc|ENSG00000011426|Q9NQW6-2|ANLN 4.24002726872762 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5545 30.092 503.0 185780.0 25 0 10756.0 + 7174 EEPSRPSASW 10 112 573.2646898794615 1144.5148268257228 2 573.2658569216728 MULTI CID FTMS 0 0 0 5534 90561.421875 0.5383655506594918 2 -0.1422443389892578 11 Unmodified _EEPSRPSASW_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000545049.1_1_12:2977686-2983239:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 38.17557092003332 0.1768326257063233 1 EEP 3 7 29.437 0.0 0.0 2.572 0.0 0.0 0.0 786.3523481060145 786.3523481060145 9.986512420283232 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + EEP 2.572 + + 249 + 1 2.157 72984.8 1.0 2179 3364 5534 DOHH2_400M_050219_1,5545 DOHH2_400M_050219_1,5545,EEPSRPSASW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5546 30.095 153.0 421710.0 25 0 50080.0 -1 0 93 490.2862127800104 489.2789363134104 1 490.2847167849541 MULTI CID FTMS 0 0 0 5534 281446.71875 0.4214394075521565 12 -0.5562343597412109 12 1 S{M(Oxidation (M))|F} 2 -1 14.693 0.0 0.0 3.0029 0.0 0.0 237.16798768235412 0.0 237.16798768235412 0.0 3.272754322738028 0.0 0.0 0 0.0 0.0 0.0 0.0 S{M(Oxidation (M))|F} 3.0029 - 21 + 1 2.157 53117.2 1.0 2180 3364 5534 DOHH2_400M_050219_1,5546 DOHH2_400M_050219_1,5546, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5547 30.101 242.0 232380.0 25 0 28279.0 + 21147 LPARSSGPL 9 95 449.26152529167706 896.5084976501541 2 449.2616454958916 MULTI CID FTMS 0 0 0 5534 156688.859375 0.042385760124445 7 -0.3693141937255859 13 Unmodified _LPARSSGPL_ REV__ENST00000379789.8_1_10:6275597-6275735:+|nuORF 10.823927491677226 0.5436922275383211 1 {I|L}P 2 -1 31.427 0.0 0.0 3.5055 0.0 0.0 0.0 683.3447970025999 683.3447970025999 18.66246519239841 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 {I|L}P 3.5055 + + 32 + 1 2.157 49318.7 1.0 2181 3364 5534 DOHH2_400M_050219_1,5547 DOHH2_400M_050219_1,5547,LPARSSGPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5548 30.105 222.0 325270.0 25 0 19369.0 + 7748 SLRIKSQEL 9 118 358.5481969930301 0 358.5485107302666 PEAK CID FTMS 0 0 0 5534 114734.734375 1.0 0 0.0 14 Unmodified _ELEKSKRAL_ nc|ENSG00000186638|Q5T7B8-4|KIF24;nc|ENSG00000186638|Q5T7B8-2|KIF24;nc|ENSG00000186638|Q5T7B8-3|KIF24;ENSG00000186638|ENST00000402558|KIF24 8.155526934196011 0.3334291183486324 1 K 1 8 6.9897 0.0 0.0 0.97747 0.0 0.0 117.68732308586648 466.27890955142817 583.9662326372946 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.97747 + + 16 + 1 2.157 62752.3 1.0 2182 3364 5534 DOHH2_400M_050219_1,5548 DOHH2_400M_050219_1,5548,ELEKSKRAL False False SLRIKSQEL 30.104928 358.548510730267 585815.5 5534.0 nc|ENSG00000186638|Q5T7B8-4|KIF24;;nc|ENSG00000186638|Q5T7B8-2|KIF24;;nc|ENSG00000186638|Q5T7B8-3|KIF24;;ENSG00000186638|ENST00000402558|KIF24 0.0784216771523157 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5550 30.111 156.0 494090.0 25 0 35830.0 + 30625 RFKDRIVSM 9 85 384.5500440753178 1150.6283028261537 3 384.5499450564384 MULTI CID FTMS 0 0 0 5549 279839.28125 0.1998017479841901 2 -0.1034736633300781 1 Unmodified _RFKDRIVSM_ ENSG00000101972|ENST00000371145|STAG2;ENSG00000118007|ENST00000383202|STAG1;nc|ENSG00000101972|Q8N3U4|STAG2;nc|ENSG00000118007|Q8WVM7-2|STAG1 21.53697664764585 0.2571576504437394 1 SM 2 7 30.133 0.0 0.0 2.6188 0.0 0.0 914.5447284626754 0.0 914.5447284626754 0.0 18.807196863200843 0.0 0.0 0 0.7614393726401688 0.0 0.3054621874040891 0.0 + SM 2.6188 + + 46 + 1 2.157 66876.7 1.0 2183 3365 5549 DOHH2_400M_050219_1,5550 DOHH2_400M_050219_1,5550,RFKDRIVSM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5551 30.124 800.0 36564.0 25 0 5483.7 -1 0 37 1131.4527269720743 3391.336351516424 3 1131.786669909954 MULTI CID FTMS 0 0 0 5549 32085.859375 0.6871531495265291 1 -0.0726966857910156 2 1 N 1 -1 5.4846 0.0 0.0 0.16172 0.0 0.0 3004.202809091504 270.06159387760005 3274.264402969104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.16172 - 2 + 1 2.157 31041.9 0.4199999868869781 2184 3365 5549 DOHH2_400M_050219_1,5551 DOHH2_400M_050219_1,5551, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5552 30.126 54.0 1625300.0 25 0 195480.0 + 13202 HGLIRKYGL 9 88 352.8821812889983 1055.624714467195 3 352.8818542361259 MULTI CID FTMS 0 0 0 5549 917024.4375 0.6227875332396348 -1 0.0695476531982421 3 Unmodified _HGLIRKYGL_ ENSG00000213741|ENST00000245458|RPS29;ENST00000496507.1_1_4:25680486-25680639:+|nuORF;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50050387-50052826:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 36.04419817259434 0.0971720506436186 1 {I|L}HG{I|L} 4 6 32.18 0.0 0.0 3.0485 0.0 0.0 0.0 632.3492525690061 632.3492525690061 6.642108281446923 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {I|L}HG{I|L} 3.0485 - 96 + 1 2.157 75378.8 1.0 2185 3365 5549 DOHH2_400M_050219_1,5552 DOHH2_400M_050219_1,5552,HGLIRKYGL True True HGLIRKYGL 30.125809 352.881854236126 15975096.0 5549.0 ENSG00000213741|ENST00000245458|RPS29;;ENST00000496507.1_1_4:25680486-25680639:+|nuORF;;nc|ENSG00000213741|P62273-2|RPS29;;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;;ENST00000557367.2_1_14:50050387-50052826:-|nuORF 4.945324738820394 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5553 30.129 144.0 480310.0 25 0 28246.0 + 38219 TPRPKFSV 8 102 466.27137769526144 930.5282024573228 2 466.2718078494072 MULTI CID FTMS 0 0 0 5549 284352.3125 0.5480851148926246 -4 0.3299770355224609 4 Unmodified _TPRPKFSV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 34.40172386719151 0.3279500639400574 1 {M(Oxidation (M))|F}SV 3 5 28.065 0.0 0.0 3.016 0.0 0.0 579.3488026349625 0.0 579.3488026349625 0.0 13.116042352767732 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.0 + {M(Oxidation (M))|F}SV 3.016 + + 113 1 2.157 59412.9 1.0 2186 3365 5549 DOHH2_400M_050219_1,5553 DOHH2_400M_050219_1,5553,TPRPKFSV False True TPRPKFSV 30.128694 466.271807849407 2785048.0 5549.0 ENST00000478340.2_1_6:35437033-35438524:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENSG00000198755|ENST00000322203|RPL10A 5.307026386260986 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5554 30.134 288.0 450820.0 25 0 32496.0 + 6877 EEEKNFKAF 9 151 381.18918820613294 1140.5457352185988 3 381.1888000369072 MULTI CID FTMS 0 0 0 5549 160456.84375 0.1522480838149493 -4 0.3299770355224609 5 Unmodified _EEEKNFKAF_ ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13 11.640296217721598 0.521594087909532 1 {[TV]|[{I|L}S]}EEGN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 10 3 + 24.402 0.0 0.0 2.1395 2.1395 75.787 0.0 0.0 0.0 4.259687322722812 12.18388217506849 4.259687322722812 9.164539485499253 0 0.0 0.0 0.0 0.0 {[TV]|[{I|L}S]}EEGN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}EEGGG{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[KA]{M(Oxidation (M))|F}E[DN]A{M(Oxidation (M))|F} 2.1395;1.336;0.42847 -;-;- 295 + 1 2.157 104666.3 1.0 2187 3365 5549 DOHH2_400M_050219_1,5554 DOHH2_400M_050219_1,5554,EEEKNFKAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5555 30.148 800.0 262200.0 25 0 23140.0 + 38481 TSDSTVYDY 9 154 525.7168127021619 1049.4190724711236 2 525.7174560427666 MULTI CID FTMS 0 0 0 5549 127089.4296875 0.567897077688294 -2 0.1569671630859375 6 Unmodified _TSDSTVYDY_ ENSG00000115944|ENST00000234301|COX7A2L;ENST00000464443.5_1_2:42578361-42588194:-|nuORF 57.47134341890925 0.0274820932774257 1 K{I|L}YDY 5 6 28.619 0.0 0.0 2.7272 0.0 0.0 349.0832703244424 0.0 349.0832703244424 0.0 2.127978255614206 0.0 0.0 0 0.3494850021680094 0.0 0.75 0.0 K{I|L}YDY 2.7272 - 643 + 1 2.157 161135.4 0.5899999737739563 2188 3365 5549 DOHH2_400M_050219_1,5555 DOHH2_400M_050219_1,5555,TSDSTVYDY True True TSDSTVYDY 30.147809 525.717456042767 1090931.0 5549.0 ENSG00000115944|ENST00000234301|COX7A2L;;ENST00000464443.5_1_2:42578361-42588194:-|nuORF 4.647456248601277 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5556 30.152 243.0 186000.0 25 0 23278.0 + 22776 LQQTGRTIA 9 88 494.2828657580302 986.5511785828604 2 494.2829162478447 MULTI CID FTMS 0 0 0 5549 123503.640625 1.0 0 0.0 7 Unmodified _LQQTGRTIA_ REV__ENSG00000103064|ENST00000219343|SLC7A6 6.2057823575117 0.6980434486082533 1 {I|L} 1 -1 11.259 0.0 0.0 1.1413 0.0 0.0 855.4562364215308 0.0 855.4562364215308 0.0 7.764209843288903 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1413 + + 54 + 1 2.157 40272.4 1.0 2189 3365 5549 DOHH2_400M_050219_1,5556 DOHH2_400M_050219_1,5556,LQQTGRTIA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5557 30.166 800.0 141310.0 25 0 13059.0 + + -1 VVDPDEKSIMTY 12 129 706.8355222718258 0 706.8350097537041 PEAK CID FTMS 0 0 0 5549 110083.703125 0.5846797922081113 -2 0.1569671630859375 8 2 Oxidation (M) _M(Oxidation (M))HMVLLEM(Oxidation (M))LTY_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 21.53697664764585 0.3337597044351383 1 DP{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}SK 8 -1 44.105 0.0 0.0 3.1244 0.0 0.0 198.1387788879504 338.09906946353755 536.237848351488 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.274227503252014 0.0 DP{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}SK 3.1244 - 2598 + 1 2.157 83908.4 0.6200000047683716 2190 3365 5549 DOHH2_400M_050219_1,5557 DOHH2_400M_050219_1,5557,MHMVLLEMLTY False False VVDPDEKSIMTY 30.166178 706.835009753704 865068.6875 5549.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 8.685063203175863 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5558 30.169 158.0 326560.0 25 0 24538.0 + 10344 FSFPCPESY 9 84 538.7238980863284 1075.4332432394567 2 538.7245361208916 MULTI CID FTMS 0 0 0 5549 267100.46875 0.9270295248277034 1 -0.0726966857910156 9 Unmodified _FSFPCPESY_ REV__ENSG00000176009|ENST00000531618|ASCL3 12.531546534597751 0.4974689918368763 1 SY 2 -1 24.024 0.0 0.0 2.2339 0.0 0.0 807.3271238155409 0.0 807.3271238155409 0.0 9.124832250028144 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 SY 2.2339 + + 73 + 1 2.157 46201.7 1.0 2191 3365 5549 DOHH2_400M_050219_1,5558 DOHH2_400M_050219_1,5558,FSFPCPESY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5559 30.174 196.0 332900.0 25 0 21822.0 -1 LTMAEGPYK 9 103 513.2544708881479 1024.4943888430955 2 513.2538329958916 MULTI CID FTMS 0 0 0 5549 164096.125 0.3442503452451232 -5 0.3786525726318359 10 Oxidation (M) _LTM(Oxidation (M))AEGPYK_ ENSG00000089597|ENST00000356638|GANAB;ENST00000524437.5_1_11:62402291-62406896:-|nuORF;ENST00000526210.1_1_11:62402291-62407104:-|nuORF;ENST00000526392.1_1_11:62402291-62414071:-|nuORF;nc|ENSG00000089597|Q14697-2|GANAB 10.073929032068715 0.563993802247229 1 Y 1 -1 10.181 0.0 0.0 0.99376 0.0 0.0 843.419679836063 0.0 843.419679836063 0.0 0.3481796407069737 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.99376 + + 50 + 1 2.157 56361.2 1.0 2192 3365 5549 DOHH2_400M_050219_1,5559 DOHH2_400M_050219_1,5559,LTMAEGPYK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5560 30.178 178.0 258090.0 25 0 14472.0 + 32962 SELRSQSW 8 97 496.7434425218602 0 496.7432128787041 PEAK CID FTMS 0 0 0 5549 151261.46875 0.9482739147960164 -1 0.0695476531982421 11 Unmodified _SELRSQSW_ ENSG00000111615|ENST00000229214|KRR1 51.629811660486645 0.1028843620160934 1 SQS 3 5 22.087 0.0 0.0 2.2277 0.0 0.0 204.09118084274547 482.2367037408813 686.3278845836268 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3252574989159953 0.0 + SQS 2.2277 + + 44 + 1 2.157 40361.8 1.0 2193 3365 5549 DOHH2_400M_050219_1,5560 DOHH2_400M_050219_1,5560,SELRSQSW True True SELRSQSW 30.177696 496.743212878704 911623.625 5549.0 ENSG00000111615|ENST00000229214|KRR1 8.863972981770834 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5562 30.182 81.0 558700.0 25 0 56024.0 + 28364 PSGKLNKVM 9 86 487.2785596117625 972.542566290325 2 487.7800170779228 MULTI CID FTMS 0 0 0 5561 353834.4375 0.4144696658275537 -4 0.3258228302001953 1 Unmodified _PSGKLNKVM_ REV__ENSG00000101974|ENST00000682941|ATP11C;REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF;REV__nc|ENSG00000101974|Q8NB49-2|ATP11C;REV__nc|ENSG00000101974|Q8NB49-3|ATP11C;REV__nc|ENSG00000101974|Q8NB49-4|ATP11C;REV__nc|ENSG00000101974|Q8NB49|ATP11C 12.531546534597751 0.4974689918368763 1 VM 2 -1 20.969 0.0 0.0 2.1561 0.0 0.0 724.4230269610266 0.0 724.4230269610266 0.0 1.646419755561258 0.0 0.0 0 0.0 0.0 0.0 0.0 VM 2.1561 + + 158 + 1 2.157 41245.8 1.0 2194 3366 5561 DOHH2_400M_050219_1,5562 DOHH2_400M_050219_1,5562,PSGKLNKVM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5563 30.185 139.0 741440.0 25 0 42155.0 + 31484 RPYAKHWL 8 110 357.5347897714626 1069.582539914588 3 357.5344116091728 MULTI CID FTMS 0 0 0 5561 324698.28125 0.7470721890077334 -2 0.1422443389892578 2 Unmodified _RPYAKHWL_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 28.486842064014134 0.4448922141344407 1 [RP]YAKHW{I|L} 8 0 + 34.192 0.0 0.0 3.1968 3.1968 80.02 0.0 0.0 0.0 3.979400086720375 20.21275415750985 3.979400086720375 10.472961616534093 0 0.7059771852360797 0.0 0.0 0.0 + + [RP]YAKHW{I|L};[{M(Oxidation (M))|F}V]VAAKHW{I|L};{I|L}{[CT]|[{M(Oxidation (M))|F}G]}HKAAVMP;[{M(Oxidation (M))|F}V][Q{I|L}]KHW{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[RV]RH{[DA]|[EG]}{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[RV]RH[VS]{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[RV][VG]HW{I|L};{I|L}{[CT]|[{M(Oxidation (M))|F}G]}HK[Q{I|L}]MP 3.1968;2.2176;1.4483;1.3144;1.134;1.134;1.134;0.54007 +;-;-;-;-;-;-;- + 191 1 2.157 85318.2 1.0 2195 3366 5561 DOHH2_400M_050219_1,5563 DOHH2_400M_050219_1,5563,RPYAKHWL False True RPYAKHWL 30.185204 357.534411609173 2942061.0 5561.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 4.886524836222331 3.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5564 30.186 26.0 2531100.0 25 0 364770.0 + 9477 FLDESRSTQY 10 68 623.2909170671036 1244.567281201007 2 623.2910644412041 MULTI CID FTMS 0 0 0 5561 2050007.375 0.2580203610056867 -4 0.3258228302001953 3 Unmodified _FLDESRSTQY_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 53.31671820480216 0.0606844387689228 1 {M(Oxidation (M))|F}{I|L}DES 5 5 63.469 0.0 0.0 5.0997 0.0 0.0 0.0 650.2878512018186 650.2878512018186 31.52826595950265 0.0 0.0 0.0 0 0.9247425010840048 1.3010299956639813 0.3252574989159953 0.0 + {M(Oxidation (M))|F}{I|L}DES 5.0997 + + 66 + 1 2.157 53860.6 1.0 2196 3366 5561 DOHH2_400M_050219_1,5564 DOHH2_400M_050219_1,5564,FLDESRSTQY True True FLDESRSTQY 30.186384 623.291064441204 129900108.0 5561.0 ENSG00000183207|ENST00000595090|RUVBL2;;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;;nc|ENSG00000183207|Q9Y230-2|RUVBL2 8.441762765248617 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5565 30.188 88.0 490600.0 25 0 48409.0 + 6879 EEEKNFKAF 9 77 571.2799067782582 1140.5452606233164 2 571.2798339724541 MULTI CID FTMS 0 0 0 5561 444328.25 0.550321302245191 -3 0.2296638488769531 4 Unmodified _EEEKNFKAF_ ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13 54.773552608820026 0.0299037012502309 1 A{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}N{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 8 4 39.245 0.0 0.0 3.4409 0.0 0.0 183.08871083235084 0.0 183.08871083235084 0.0 34.64123782136497 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.3054621874040891 A{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}N{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 3.4409 - 189 + 1 2.157 38694.2 1.0 2197 3366 5561 DOHH2_400M_050219_1,5565 DOHH2_400M_050219_1,5565,EEEKNFKAF True True EEEKNFKAF 30.188342 571.279833972454 10939012.5 5561.0 ENST00000399461.8_1_16:89627605-89629447:+|nuORF;;ENSG00000167526|ENST00000311528|RPL13;;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;;nc|ENSG00000167526|P26373-2|RPL13;;ENST00000484610.5_1_16:89627907-89629447:+|nuORF 6.954326152801514 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5566 30.191 140.0 625080.0 25 0 62356.0 5514 DLVVKKEL 8 106 472.29477193932433 942.5749909454488 2 472.2949096560478 MULTI CID FTMS 0 0 0 5561 266802.84375 0.4182787163777575 -2 0.1422443389892578 5 Unmodified _DLVVKKEL_ ENSG00000183624|ENST00000383463|HMCES 26.268140514670165 0.4916104673212489 1 D{I|L}VVK 5 3 62.435 0.0 0.0 6.6239 0.0 0.0 0.0 385.2095125787719 385.2095125787719 50.12788130611845 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + D{I|L}VVK 6.6239 + + 118 + 1 2.157 72600.4 1.0 2198 3366 5561 DOHH2_400M_050219_1,5566 DOHH2_400M_050219_1,5566,DLVVKKEL False True DLVVKGSLL 30.191163 472.294909656048 3052094.75 5561.0 ENSG00000166106|ENST00000299164|ADAMTS15 0.4606656680504481 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5567 30.194 123.0 379020.0 25 0 57504.0 + + -1 SINPNNHSW 9 95 533.7469831797385 1065.479413426277 2 534.7468139529228 MULTI CID FTMS 0 0 0 5561 228559.28125 0.5831675261213136 -8 0.4772796630859375 6 Carbamidomethyl (C) _VTLDMGASC(Carbamidomethyl (C))L_ ENST00000523352.1_1_8:95884148-95885795:+|nuORF;ENSG00000164941|ENST00000523731|INTS8;nc|ENSG00000164941|Q75QN2-2|INTS8 10.823927491677226 0.6659270209832991 1 {[TV]|[{I|L}S]}N 3 -1 25.062 0.0 0.0 2.3521 0.0 0.0 0.0 748.297747737077 748.297747737077 4.42172165407278 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}N 2.3521 - 206 1 2.157 40035.8 1.0 2199 3366 5561 DOHH2_400M_050219_1,5567 DOHH2_400M_050219_1,5567,VTLDMGASCL False False SINPNNHSW 30.193715 534.746813952923 1588401.75 5561.0 ENST00000523352.1_1_8:95884148-95885795:+|nuORF;;ENSG00000164941|ENST00000523731|INTS8;;nc|ENSG00000164941|Q75QN2-2|INTS8 5.012037515640259 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5568 30.2 357.0 231050.0 25 0 22208.0 + 610 AEKELTDRNW 10 102 631.3117103588227 1260.6088677844452 2 631.3118163943291 MULTI CID FTMS 0 0 0 5561 175240.796875 0.775288175079992 -3 0.2296638488769531 7 Unmodified _AEKELTDRNW_ ENSG00000093000|ENST00000347635|NUP50;ENST00000497960.5_1_22:45560109-45567681:+|nuORF 44.391923383255 0.1130657680819667 1 {[CP]|[EA]}KE{I|L}TDQS{I|L}Q 11 4 {[CP]|[EA]} + + 58.643 2.8432 1.421 4.6519 4.6519 55.415 0.0 0.0 0.0 0.0 37.67351668619355 0.0 0.0 0 1.9731975075880328 0.0 0.4247425010840047 1.2302046884880935 {[CP]|[EA]}KE{I|L}TDQS{I|L}Q 4.6519 - 733 + 1 2.157 66069.0 1.0 2200 3366 5561 DOHH2_400M_050219_1,5568 DOHH2_400M_050219_1,5568,AEKELTDRNW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5569 30.208 468.0 312600.0 25 0 36082.0 + 25898 NLKEKIKEL 9 131 557.8452073640508 1113.6758617949015 2 557.8453246951103 MULTI CID FTMS 0 0 0 5561 169527.296875 0.6936309132615094 -2 0.1422443389892578 8 Unmodified _NLKEKIKEL_ ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A 78.06048673739656 0.0179866705178931 1 {I|L}NKE 4 6 67.924 0.0 0.0 6.0991 0.0 0.0 0.0 626.3888643854124 626.3888643854124 23.88058735974866 0.0 0.0 0.0 0 0.7614393726401688 2.0 1.1382104921644451 0.0 {I|L}NKE 6.0991 - 2211 + 1 2.157 113297.1 1.0 2201 3366 5561 DOHH2_400M_050219_1,5569 DOHH2_400M_050219_1,5569,NLKEKIKEL True True NLKEKIKEL 30.208467 557.84532469511 1255920.875 5561.0 ENSG00000004487|ENST00000400181|KDM1A;;nc|ENSG00000004487|O60341|KDM1A 4.953330039978027 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5571 30.226 800.0 134270.0 25 0 15425.0 + -1 ASNDYTQQATQSY 13 112 759.8223754089903 1517.6301978847805 2 759.8212768435478 MULTI CID FTMS 0 0 0 5570 100361.6171875 0.549316824378278 2 -0.0424060821533203 1 2 Carbamidomethyl (C) _EQRC(Carbamidomethyl (C))WHQPC(Carbamidomethyl (C))FA_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 5.296884461304476 0.8501568894076437 1 [DN]{[CP]|[EA]}YTQQA 9 -1 22.607 0.0 0.0 1.4896 0.0 0.0 0.0 494.1916352229243 494.1916352229243 0.5287119806395992 0.0 0.0 0.0 0 0.5796896906561032 1.3979400086720375 0.6694451763165201 0.3494850021680094 [DN]{[CP]|[EA]}YTQQA 1.4896 - 1489 1 2.157 77026.6 0.6600000262260437 2202 3367 5570 DOHH2_400M_050219_1,5571 DOHH2_400M_050219_1,5571,EQRCWHQPCFA False False ASNDYTQQATQSY 30.225631 759.821276843548 1044031.3125 5570.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 7.705159664154053 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5572 30.23 257.0 362670.0 25 0 23895.0 + 33280 SFPQLSRLK 9 121 538.3165395477707 1074.6185261623414 2 538.3162719607353 MULTI CID FTMS 0 0 0 5570 220952.5625 0.5328238166710638 -3 0.1730213165283203 2 Unmodified _SFPQLSRLK_ ENSG00000130182|ENST00000576985|ZSCAN10;nc|ENSG00000130182|Q96SZ4-3|ZSCAN10;nc|ENSG00000130182|Q96SZ4|ZSCAN10 34.93206674587334 0.1032771302489716 1 QPSE 4 7 32.563 0.0 0.0 3.0302 0.0 0.0 615.4092884748062 0.0 615.4092884748062 0.0 3.6227313277985473 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3807196863200844 QPSE 3.0302 - 103 1 2.157 74440.2 1.0 2203 3367 5570 DOHH2_400M_050219_1,5572 DOHH2_400M_050219_1,5572,SFPQLSRLK True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5573 30.243 740.0 207780.0 25 0 24834.0 + 30090 QVEKRQVEI 9 180 376.8840310190152 1127.6302636572457 3 376.8844177126884 MULTI CID FTMS 0 0 0 5570 131925.5 1.0 0 0.0 3 Unmodified _QVEKRQVEI_ REV__ENSG00000109118|ENST00000332830|PHF12;REV__nc|ENSG00000109118|Q96QT6-4|PHF12 17.44264345198275 0.3645313841742926 1 {[HG]|PP}N[VS]K{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L} 10 -1 + 29.587 0.0 0.0 2.6238 2.6238 81.832 0.0 0.0 0.0 4.259687322722812 11.679987112256214 4.259687322722812 29.5872875024979 0 0.8494850021680094 0.0 0.2742275032520141 0.4247425010840047 {[HG]|PP}N[VS]K{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L} 2.6238 - 578 1 2.157 121536.1 1.0 2204 3367 5570 DOHH2_400M_050219_1,5573 DOHH2_400M_050219_1,5573,QVEKRQVEI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5575 30.248 46.0 916810.0 25 0 111460.0 + 482 AEGIHTGQF 9 76 480.2327174496331 958.4508819660664 2 480.2327148318291 MULTI CID FTMS 0 0 0 5574 1070766.25 0.362689880047414 3 -0.1615486145019531 1 Unmodified _AEGIHTGQF_ ENSG00000161016|ENST00000528957|RPL8;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;ENST00000531767.1_1_8:146017155-146017514:-|nuORF 27.628801355627647 0.1796483985696185 1 [TA][HV]GQ{[CP]|[EA]}{M(Oxidation (M))|F} 9 6 + 29.516 0.0 0.0 3.0796 3.0796 76.927 0.0 0.0 0.0 0.782184059010266 15.237731077138935 0.782184059010266 9.075221787320515 0 0.3807196863200844 0.0 0.6861818737241735 0.3494850021680094 [TA][HV]GQ{[CP]|[EA]}{M(Oxidation (M))|F};[HT]{[VA]|[{I|L}G]}GQ{[CP]|[EA]}{M(Oxidation (M))|F};{[CP]|[EA]}[HK]Q{[CP]|[EA]}{M(Oxidation (M))|F};[HT]{[QV]|[N{I|L}]|[RA]|[KV]}Q{[CP]|[EA]}{M(Oxidation (M))|F};[TA][HV]G[{M(Oxidation (M))|F}E]AQ 3.0796;2.1327;2.1088;1.4568;0.79257 -;-;-;-;- 236 1 2.157 36870.3 1.0 2205 3368 5574 DOHH2_400M_050219_1,5575 DOHH2_400M_050219_1,5575,AEGIHTGQF False True AEGIHTGQF 30.247933 480.232714831829 31138960.0 5574.0 ENST00000531767.1_1_8:146017155-146017514:-|nuORF;;ENSG00000161016|ENST00000528957|RPL8;;ENST00000525232.5_1_8:146017155-146017514:-|nuORF 6.342952728271484 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5576 30.251 144.0 308890.0 25 0 26528.0 + 10449 FTEQYNEQY 9 78 611.2569301361377 0 611.2567016482353 PEAK CID FTMS 0 0 0 5574 376005.53125 0.3013260807109267 3 -0.1615486145019531 2 Unmodified _FTEQYNEQY_ ENSG00000173914|ENST00000310046|RBM4B 41.8396318013385 0.053988301646488 1 NYVDY 5 7 15.94 0.0 0.0 1.306 0.0 0.0 438.1779094892691 125.0360048883422 563.2139143776113 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 NYVDY 1.306 - 90 + 1 2.157 39709.4 1.0 2206 3368 5574 DOHH2_400M_050219_1,5576 DOHH2_400M_050219_1,5576,FTEQYNEQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5578 30.256 157.0 368520.0 25 0 35897.0 + 5675 DPGTPCDQHHY 11 91 423.8378356622298 1268.4916775868894 3 423.8376953005791 MULTI CID FTMS 0 0 0 5577 341608.4375 0.8025639534695909 -1 0.0076618194580078 1 Unmodified _DPGTPCDQHHY_ REV__ENST00000602775.5_1_5:139929747-139930248:-|nuORF 6.2057823575117 0.8458686499021061 1 HY 2 -1 17.959 0.0 0.0 1.4158 0.0 0.0 950.35896992263 0.0 950.35896992263 0.0 6.699740308471753 0.0 0.0 0 0.0 0.0 0.0 0.0 HY 1.4158 + + 65 + 1 2.157 57061.8 1.0 2207 3369 5577 DOHH2_400M_050219_1,5578 DOHH2_400M_050219_1,5578,DPGTPCDQHHY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5579 30.264 396.0 343650.0 25 0 29594.0 + 21008 LNVGAGKTFK 10 131 517.8037450514648 1033.5929371697296 2 517.8035156130791 MULTI CID FTMS 0 0 0 5577 125868.5703125 0.6354416517467768 1 -0.081186294555664 2 Unmodified _LNVGAGKTFK_ REV__ENSG00000115129|ENST00000238721|TP53I3 28.49450938151212 0.328477364964909 1 D{I|L} 2 -1 34.693 0.0 0.0 3.3565 0.0 0.0 0.0 802.4570406549436 802.4570406549436 0.0 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 D{I|L} 3.3565 - 575 + 1 2.157 106174.6 1.0 2208 3369 5577 DOHH2_400M_050219_1,5579 DOHH2_400M_050219_1,5579,LNVGAGKTFK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5580 30.266 109.0 468390.0 25 0 105480.0 + 611 AEKELTDRNW 10 68 421.21055448643193 1260.6098340594958 3 421.2104675173759 MULTI CID FTMS 0 0 0 5577 279180.15625 0.8738926269361452 1 -0.081186294555664 3 Unmodified _AEKELTDRNW_ ENSG00000093000|ENST00000347635|NUP50;ENST00000497960.5_1_22:45560109-45567681:+|nuORF 21.59015148037692 0.4836074274810599 1 {[TV]|[{I|L}S]}HHDT{I|L}E 8 9 36.617 0.0 0.0 2.9047 0.0 0.0 0.0 325.15155704217085 325.15155704217085 23.51850649356642 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}HHDT{I|L}E 2.9047 - 156 1 2.157 46052.8 1.0 2209 3369 5577 DOHH2_400M_050219_1,5580 DOHH2_400M_050219_1,5580,AEKELTDRNW False True AEKELTDRNW 30.265835 421.210467517376 2954464.0 5577.0 ENST00000497960.5_1_22:45560109-45567681:+|nuORF;;ENSG00000093000|ENST00000347635|NUP50 7.374704837799072 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5581 30.28 800.0 153590.0 25 0 23531.0 + 3433 QENSSDFQSNIA 12 142 670.2917325545562 1338.5689121759124 2 670.2921020388603 MULTI CID FTMS 0 0 0 5577 160152.453125 1.0 0 0.0 4 Unmodified _CAHSFFDELRD_ chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 13.042465956692816 0.7638483625850725 1 [AG]EN{[CA]|SS}D{M(Oxidation (M))|F}Q[NS][{I|L}A] 13 10 + 49.366 0.0 0.0 3.6879 3.6879 71.067 0.0 0.0 0.0 1.5008250085285866 11.628039996593884 1.5008250085285866 1.5008250085285866 0 0.3807196863200844 1.3979400086720375 2.0626432252195626 1.024227503252014 [AG]EN{[CA]|SS}D{M(Oxidation (M))|F}Q[NS][{I|L}A];[NS]Q[WY]EQ[NS][{I|L}A];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{[CA]|SS}D{M(Oxidation (M))|F}Q[NS][{I|L}A];[AG]EN{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}Q[NS][{I|L}A];[AG]EN{[CA]|SS}D{M(Oxidation (M))|F}E{[CP]|[EA]}[{I|L}A];{[CT]|[{M(Oxidation (M))|F}G]}T[HC]D{M(Oxidation (M))|F}Q[NS][{I|L}A];[NS]Q[WY]EE{[CP]|[EA]}[{I|L}A];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{[CA]|SS}DEESM[{I|L}A];[AG]SN[WY]EQ[NS][{I|L}A];[AG]EN{[CA]|SS}DE{M(Oxidation (M))|F}{[CP]|[EA]}[{I|L}A] 3.6879;3.5758;3.1585;3.1322;2.9971;2.9926;2.8849;2.8511;2.7609;2.6406 -;-;-;-;-;-;-;-;-;- 2179 1 2.157 93872.3 0.7400000095367432 2210 3369 5577 DOHH2_400M_050219_1,5581 DOHH2_400M_050219_1,5581,CAHSFFDELRD False False QENSSDFQSNIA 30.279673 670.29210203886 894025.75 5577.0 chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;;ENSG00000169045|ENST00000393432|HNRNPH1;;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 6.551834424336751 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5582 30.294 800.0 270210.0 25 0 20963.0 -1 KDSTAWMEQFY 11 168 711.3076441748542 1420.6007354165083 2 711.3097411990166 MULTI CID FTMS 0 0 0 5577 124591.2265625 0.0050950717602038 -6 0.3028469085693359 5 Oxidation (M) _KDSTAWM(Oxidation (M))EQFY_ ENSG00000171804|ENST00000447313|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;nc|ENSG00000171804|Q6ZQQ6|WDR87 23.78978130925829 0.5336113198261219 1 [AG]AHDEAQQGGA{M(Oxidation (M))|F}Y 14 -1 + 108.58 0.0 0.0 7.643 7.643 82.029 0.0 0.0 0.0 0.6753746549549504 15.162703231326276 0.6753746549549504 0.6753746549549504 0 1.25 1.3979400086720375 1.2803695511246984 1.885151878060192 [AG]AHDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GSNHAQQGGA{M(Oxidation (M))|F}Y;[AG]NSNHAQQGGA{M(Oxidation (M))|F}Y;[AG]AHDEAGAQGGA{M(Oxidation (M))|F}Y;[AG]AHDEAQNAGA{M(Oxidation (M))|F}Y;[AG]AHDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAGAQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GSNHAGAQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQNAGA{M(Oxidation (M))|F}Y 7.643;7.5955;7.5811;7.5489;7.4783;7.4531;7.4507;7.4291;7.4163;7.4056 -;-;-;-;-;-;-;-;-;- 55250 1 2.157 150781.5 0.6499999761581421 2211 3369 5577 DOHH2_400M_050219_1,5582 DOHH2_400M_050219_1,5582,KDSTAWMEQFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5583 30.307 800.0 146220.0 25 0 8850.1 + -1 VQESCREKAKE 11 146 682.3339714258672 1362.6533899185342 2 682.3348266482353 MULTI CID FTMS 0 0 0 5577 92516.0546875 0.6219490917967806 -1 0.0076618194580078 6 Carbamidomethyl (C) _VQESC(Carbamidomethyl (C))REKAKE_ REV__ENSG00000187118|ENST00000466830|CMC1;REV__ENST00000477739.1_1_3:28283284-28357912:+|nuORF 28.49450938151212 0.4231428536161201 1 {I|L}NWC(Carbamidomethyl (C))TWR{I|L}QS 10 -1 + 71.839 0.0 0.0 5.272 5.272 77.936 0.0 0.0 0.0 19.044938854093616 2.8091881557753027 2.8091881557753027 2.8091881557753027 0 1.5941876774005248 0.958607314841775 0.5 1.1237125054200234 {I|L}NWC(Carbamidomethyl (C))TWR{I|L}QS;{I|L}NWC(Carbamidomethyl (C))TWR{I|L}SQ;{I|L}NW[CG]TWR{I|L}QS;{I|L}NW[CG]TWR{I|L}SQ;{I|L}N{M(Oxidation (M))|F}{[WN]|[YH]}WR{I|L}QS;{I|L}NWC(Carbamidomethyl (C))TWR{I|L}[AG]S;{I|L}N{M(Oxidation (M))|F}{[WN]|[YH]}WR{I|L}SQ;{I|L}GGWC(Carbamidomethyl (C))TWR{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}AD[DG]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}QS;{I|L}GGWC(Carbamidomethyl (C))TWR{I|L}SQ 5.272;5.0659;4.5995;4.3933;4.3824;4.2878;4.1762;3.896;3.7069;3.6898 -;-;-;-;-;-;-;-;-;- 1538 + 1 2.157 91223.6 0.6000000238418579 2212 3369 5577 DOHH2_400M_050219_1,5583 DOHH2_400M_050219_1,5583,VQESCREKAKE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5584 30.321 800.0 95570.0 25 0 5652.2 + 34191 KRSTYNYSL 9 116 566.2923479227603 1130.5701429123203 2 566.2927734255791 MULTI CID FTMS 0 0 0 5577 84490.1484375 0.8364340921593955 1 -0.081186294555664 7 Unmodified _SLNNHLASYL_ ENSG00000148308|ENST00000372097|GTF3C5;nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5 34.221707139014875 0.2185845369562963 1 NYS{I|L} 4 7 22.862 0.0 0.0 2.0221 0.0 0.0 635.338670799025 0.0 635.338670799025 0.0 9.366903183326514 0.0 0.0 0 0.718765315847925 0.0 0.0 0.4247425010840047 NYS{I|L} 2.0221 - 225 1 2.157 61110.7 0.5400000214576721 2213 3369 5577 DOHH2_400M_050219_1,5584 DOHH2_400M_050219_1,5584,SLNNHLASYL False False KRSTYNYSL 30.321166 566.292773425579 517619.15625 5577.0 ENSG00000148308|ENST00000372097|GTF3C5;;nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5 2.3013180692990622 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5585 30.326 239.0 289880.0 25 0 26212.0 + -1 AEKAMKMIAA 10 112 548.282761396406 1094.550969859612 2 548.2803222537041 MULTI CID FTMS 0 0 0 5577 177970.109375 0.1428845851616733 19 -1.0572891235351562 8 2 Oxidation (M) _AEKAM(Oxidation (M))KM(Oxidation (M))IAA_ REV__ENSG00000121671|ENST00000616080|CRY2;REV__nc|ENSG00000121671|Q49AN0-2|CRY2 10.073929032068715 0.6785112666868882 1 [{I|L}T]AYPEH[HK] 9 -1 + 35.701 0.0 0.0 3.2617 3.2617 76.841 0.0 0.0 0.0 3.064441857021855 12.54818109565186 3.064441857021855 8.261750409443192 0 2.061243137115873 0.7695510786217261 0.0 0.0 [{I|L}T]AYPEH[HK];{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH[PA]P;{[TV]|[{I|L}S]}[WY]PYAVP;{[TV]|[{I|L}S]}[WY]PPHVP;{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]{[WT]|[RM]}{M(Oxidation (M))|F}P;[{I|L}T]A[H{I|L}][{M(Oxidation (M))|F}E][HK];[TA]{I|L}YPEH[HK];[{I|L}T]H[MD][{I|L}T][HK];{[TV]|[{I|L}S]}[WY]PY{I|L}GP;{[TV]|[{I|L}S]}M[{I|L}T]EH[HK] 3.2617;2.5069;2.4107;1.9748;1.5112;1.4095;1.3297;1.2141;1.1818;1.1729 -;-;-;-;-;-;-;-;-;- 562 1 2.157 58534.4 1.0 2214 3369 5577 DOHH2_400M_050219_1,5585 DOHH2_400M_050219_1,5585,AEKAMKMIAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5586 30.332 265.0 324600.0 25 0 34887.0 -1 0 107 414.255182057291 413.247905590691 1 415.2543517947197 MULTI CID FTMS 0 0 0 5577 138796.546875 0.0693604719802707 20 -1.105022430419922 9 1 [VP]S 3 -1 24.437 0.0 0.0 5.9134 0.0 0.0 0.0 127.07164151281911 127.07164151281911 14.159388353077969 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VP]S 5.9134 - 24 1 2.157 71056.2 1.0 2215 3369 5577 DOHH2_400M_050219_1,5586 DOHH2_400M_050219_1,5586, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5588 30.337 49.0 738640.0 25 0 76290.0 + 19216 LEGNPDTHSW 10 66 578.2566357593115 1154.498718585423 2 578.2571288943291 MULTI CID FTMS 0 0 0 5587 902525.5 0.2873922359320102 4 -0.1965618133544922 1 Unmodified _LEGNPDTHSW_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 26.268140514670165 0.3785003716575977 1 {[QN]|[E{I|L}]|[KN]}GN[DP]TH{[WS]|[C(Carbamidomethyl (C)){I|L}]} 10 0 + 44.722 0.0 0.0 3.8737 3.8737 76.124 0.0 0.0 0.0 5.1851393987788725 5.1851393987788725 5.1851393987788725 5.1851393987788725 0 0.6989700043360187 2.0 0.3807196863200844 0.0 + + {[QN]|[E{I|L}]|[KN]}GN[DP]TH{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}GET[DP][NG][HS] 3.8737;3.4246 +;- + 130 + 1 2.156 32802.4 1.0 2216 3370 5587 DOHH2_400M_050219_1,5588 DOHH2_400M_050219_1,5588,LEGNPDTHSW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5589 30.339 86.0 411740.0 25 0 50063.0 + 6515 AEAEKTFSY 9 60 523.2455553846768 1044.4765578361537 2 523.2456542849541 MULTI CID FTMS 0 0 0 5587 518246.0625 0.5259800401364133 3 -0.1263961791992187 2 Unmodified _EAKTYAAEY_ ENSG00000196655|ENST00000533632|TRAPPC4;nc|ENSG00000196655|Q9Y296-2|TRAPPC4;ENST00000531290.5_1_11:118889505-118889751:+|nuORF;ENST00000447216.2_1_11:118889505-118891019:+|nuORF 18.1463463914782 0.3454829746528889 1 {[CP]|[EA]}AE[KT]{M(Oxidation (M))|F}SY 9 6 + 34.371 0.0 0.0 3.2907 3.2907 71.562 0.0 0.0 0.0 14.193474691972988 1.7288529850385004 1.7288529850385004 2.80461757126535 0 0.4247425010840047 0.0 0.0 0.0 {[CP]|[EA]}AE[KT]{M(Oxidation (M))|F}SY;{[CP]|[EA]}AE{[QS]|[NT]}T[VG][PG];{[CP]|[EA]}[HM]{M(Oxidation (M))|F}T[VG][PG];{[CP]|[EA]}A{[QS]|[NT]}ET[VG][PG];{[CP]|[EA]}KT{[QS]|[NT]}[PG]{NN|[MP]|[D{I|L}]|[EV]};{[CP]|[EA]}AE[QA][WQ]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT{[QS]|[NT]}[PG]{NN|[MP]|[D{I|L}]|[EV]};[RD]E[C(Carbamidomethyl (C))R][VG][PG];{[CP]|[EA]}K{[HG]|PP}[{M(Oxidation (M))|F}E]{NN|[MP]|[D{I|L}]|[EV]};{[CP]|[EA]}K[C(Carbamidomethyl (C))R][PG]{NN|[MP]|[D{I|L}]|[EV]} 3.2907;3.0222;2.7571;2.5654;1.7197;1.3178;1.1187;0.99606;0.75166;0.72975 -;-;-;-;-;-;-;-;-;- 218 + 1 2.156 34262.1 1.0 2217 3370 5587 DOHH2_400M_050219_1,5589 DOHH2_400M_050219_1,5589,EAKTYAAEY False False AEAEKTFSY 30.339108 523.245654284954 11225744.0 5587.0 ENSG00000196655|ENST00000533632|TRAPPC4;;nc|ENSG00000196655|Q9Y296-2|TRAPPC4;;ENST00000531290.5_1_11:118889505-118889751:+|nuORF;;ENST00000447216.2_1_11:118889505-118891019:+|nuORF 5.086989323298137 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5590 30.341 78.0 633120.0 25 0 103070.0 + 6571 EALTKEEL 8 84 466.7505804765549 931.4866080199098 2 466.7505370974541 MULTI CID FTMS 0 0 0 5587 508511.84375 1.0 0 0.0 3 Unmodified _EALTKEEL_ ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16552809-16553013:-|nuORF 23.1484247019978 0.5573009939494978 1 {I|L} 1 7 15.485 0.0 0.0 1.6623 0.0 0.0 800.391620082213 0.0 800.391620082213 0.0 -6.1194126402513405 -6.1194126402513405 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.6623 + + 244 + 1 2.156 42872.4 1.0 2218 3370 5587 DOHH2_400M_050219_1,5590 DOHH2_400M_050219_1,5590,EALTKEEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5591 30.343 78.0 731520.0 25 0 71917.0 + 2539 ASEFPGAQHY 10 78 553.7487966257635 1105.4830403183269 2 553.7483398318291 MULTI CID FTMS 0 0 0 5587 491645.40625 0.4017714853783415 -6 0.2966136932373047 4 Unmodified _ASEFPGAQHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000566509.5_1_15:73052730-73067416:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-5|ADPGK 36.12702656103203 0.1984647928738587 1 {[SA]|[TG]}E{[WT]|[RM]}P{M(Oxidation (M))|F} 7 7 31.699 0.0 0.0 2.8675 0.0 0.0 0.0 284.0883650184172 284.0883650184172 19.22508200162774 0.0 0.0 0.0 0 0.0 1.0 1.3494850021680094 0.0 {[SA]|[TG]}E{[WT]|[RM]}P{M(Oxidation (M))|F} 2.8675 - 171 1 2.156 49933.9 1.0 2219 3370 5587 DOHH2_400M_050219_1,5591 DOHH2_400M_050219_1,5591,ASEFPGAQHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5592 30.345 104.0 717480.0 25 0 49301.0 + 5428 DLMRRQEEL 9 94 397.2048952895548 1188.5928564688645 3 397.2049133181572 MULTI CID FTMS 0 0 0 5587 483066.65625 0.6520962914103737 -1 0.081186294555664 5 Unmodified _DLMRRQEEL_ ENSG00000116560|ENST00000357214|SFPQ;ENSG00000121390|ENST00000338910|PSPC1;ENSG00000147140|ENST00000276079|NONO;ENST00000471419.6_1_X:70511819-70517312:+|nuORF;ENST00000473525.1_1_X:70516758-70517827:+|nuORF;nc|ENSG00000116560|P23246-2|SFPQ;nc|ENSG00000121390|Q8WXF1-2|PSPC1;nc|ENSG00000147140|Q15233-2|NONO 27.628801355627647 0.1796483985696185 1 {NN|[MP]|[D{I|L}]|[EV]}G 3 7 27.932 0.0 0.0 2.35 0.0 0.0 0.0 900.4327667073989 900.4327667073989 2.001962355242952 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}G 2.35 - 53 1 2.156 62599.5 1.0 2220 3370 5587 DOHH2_400M_050219_1,5592 DOHH2_400M_050219_1,5592,DLMRRQEEL False True DLMRRQEEL 30.344895 397.204913318157 3812320.0 5587.0 ENST00000471419.6_1_X:70511819-70517312:+|nuORF;;nc|ENSG00000147140|Q15233-2|NONO;;ENSG00000147140|ENST00000276079|NONO;;nc|ENSG00000121390|Q8WXF1-2|PSPC1;;ENSG00000121390|ENST00000338910|PSPC1;;ENST00000473525.1_1_X:70516758-70517827:+|nuORF;;ENSG00000116560|ENST00000357214|SFPQ;;nc|ENSG00000116560|P23246-2|SFPQ 3.6040796438852944 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5593 30.347 111.0 746620.0 25 0 211850.0 + 5429 DLMRRQEEL 9 56 595.3032071873502 1188.5918614415002 2 595.3035156130791 MULTI CID FTMS 0 0 0 5587 455201.90625 0.6418799251025715 -2 0.0888481140136718 6 Unmodified _DLMRRQEEL_ ENSG00000116560|ENST00000357214|SFPQ;ENSG00000121390|ENST00000338910|PSPC1;ENSG00000147140|ENST00000276079|NONO;ENST00000471419.6_1_X:70511819-70517312:+|nuORF;ENST00000473525.1_1_X:70516758-70517827:+|nuORF;nc|ENSG00000116560|P23246-2|SFPQ;nc|ENSG00000121390|Q8WXF1-2|PSPC1;nc|ENSG00000147140|Q15233-2|NONO 27.628801355627647 0.1796483985696185 1 {I|L}D 2 8 48.583 0.0 0.0 4.0875 0.0 0.0 0.0 957.4573029436618 957.4573029436618 32.11758134947864 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.0 {I|L}D 4.0875 - 16 + 1 2.156 67937.7 1.0 2221 3370 5587 DOHH2_400M_050219_1,5593 DOHH2_400M_050219_1,5593,DLMRRQEEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5594 30.352 241.0 434210.0 25 0 23904.0 + 26432 NTDSPLRY 8 137 483.2379802313025 964.461407529405 2 483.2382385134697 MULTI CID FTMS 0 0 0 5587 279375.46875 0.0078384017534759 10 -0.5029582977294922 7 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 46.020951573049366 0.1579632664462935 1 {[QS]|[NT]}DSP{I|L}RY 8 0 + 52.912 0.0 0.0 5.4861 5.4861 88.622 0.0 0.0 0.0 40.9220109295897 7.722160991462815 7.722160991462815 14.076998459611936 0 0.4247425010840047 2.0 0.3494850021680094 0.0 + + {[QS]|[NT]}DSP{I|L}RY;{[QS]|[NT]}DSP[YR]{I|L} 5.4861;4.0266 +;- + 154 + 1 2.156 84108.3 1.0 2222 3370 5587 DOHH2_400M_050219_1,5594 DOHH2_400M_050219_1,5594,NTDSPLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5595 30.355 187.0 299890.0 25 0 39066.0 + 16084 ITQGTPLKY 9 91 510.7900759342149 1019.5655989352298 2 510.7901489138603 MULTI CID FTMS 0 0 0 5587 276595.5 1.0 0 0.0 8 Unmodified _ITQGTPLKY_ ENSG00000196498|ENST00000405201|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;nc|ENSG00000196498|Q9Y618-5|NCOR2 42.312485326615175 0.0627620958981271 1 {I|L}TQGT[{I|L}P]KY 9 0 + 78.554 0.0 0.0 7.7047 7.7047 92.213 0.0 0.0 0.0 62.10077508221467 11.884249941294058 11.884249941294058 9.208187539523747 0 0.4247425010840047 2.0 0.8494850021680094 0.5 + + {I|L}TQGT[{I|L}P]KY;{I|L}T[AG]GT[{I|L}P]KY;{I|L}TQ[PA]{[TV]|[{I|L}S]}KY;{I|L}TQG[Q{I|L}]VVY;{I|L}TQ[KA][YT][VP];[{I|L}T]{[ES]|[DT]|[{I|L}C]}[KT][WR];{[NV]|[RG]}[VS]T[{I|L}P]KY;{[NV]|[RG]}{M(Oxidation (M))|F}[KT]{[ES]|[DT]|[{I|L}C]}[VP];[K{I|L}][HM][PA]Q[VP] 7.7047;6.8015;6.2446;4.8597;4.2005;1.95;1.5282;0.32714;0.29646 +;-;-;-;-;-;-;-;- + 332 + 1 2.156 47882.9 1.0 2223 3370 5587 DOHH2_400M_050219_1,5595 DOHH2_400M_050219_1,5595,ITQGTPLKY True True ITQGTPLKY 30.355345 510.79014891386 1504153.5 5587.0 nc|ENSG00000196498|Q9Y618-4|NCOR2;;ENSG00000196498|ENST00000405201|NCOR2;;nc|ENSG00000196498|Q9Y618-5|NCOR2 6.99586280186971 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5596 30.362 377.0 279780.0 25 0 34751.0 + 26314 NRKISNITF 9 134 364.8772053661625 0 364.8771850466728 PEAK CID FTMS 0 0 0 5587 148874.84375 1.0 0 0.0 9 Unmodified _NRKISNITF_ ENST00000392179.4_1_1:161183807-161183942:+|nuORF 6.723162845929126 0.3444685223463734 1 T 1 8 5.6739 0.0 0.0 0.77965 0.0 0.0 541.6026793096704 82.06688104801015 623.6695603576806 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1694451763165201 0.0 + T 0.77965 + + 20 + 1 2.156 90846.9 1.0 2224 3370 5587 DOHH2_400M_050219_1,5596 DOHH2_400M_050219_1,5596,NRKISNITF False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5597 30.376 800.0 163080.0 25 0 13935.0 + 6184 DTDYRSMEY 9 169 590.2346598782802 1178.4547668233604 2 590.2350341677666 MULTI CID FTMS 0 0 0 5587 143419.125 0.1611928195308962 4 -0.1965618133544922 10 Unmodified _DTDYRSMEY_ ENSG00000004534|ENST00000266022|RBM6;nc|ENSG00000004534|P78332-3|RBM6 67.83816525789305 0.0219346420158844 1 {[ES]|[DT]|[{I|L}C]}DYRMSEY 9 2 + 44.949 0.0 0.0 3.8142 3.8142 73.497 0.0 0.0 0.0 7.632192780232785 29.459406196379447 7.632192780232785 3.0102999566398125 0 1.8182503180159344 0.0 1.1237125054200234 0.0 {[ES]|[DT]|[{I|L}C]}DYRMSEY;{[ES]|[DT]|[{I|L}C]}DYRSMEY;{[ES]|[DT]|[{I|L}C]}DY[C(Carbamidomethyl (C))K]{[QS]|[NT]}Y;{[ES]|[DT]|[{I|L}C]}D{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}MEY;{[ES]|[DT]|[{I|L}C]}YD[C(Carbamidomethyl (C))K]{[QS]|[NT]}Y;{[QN]|[E{I|L}]|[KN]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NMSEY;{[ES]|[DT]|[{I|L}C]}DYR{[CP]|[EA]}{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}DYRMY{[ES]|[DT]|[{I|L}C]};{[QN]|[E{I|L}]|[KN]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NSMEY;[YE]{[ET]|[MV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SEY 3.8142;3.5588;2.9095;2.8839;2.5637;2.0775;2.076;2.0132;1.822;1.7681 -;+;-;-;-;-;-;-;-;- + 589 1 2.156 96348.1 0.6800000071525574 2225 3370 5587 DOHH2_400M_050219_1,5597 DOHH2_400M_050219_1,5597,DTDYRSMEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5598 30.387 606.0 380260.0 25 0 54988.0 + 34218 SLPKKVSL 8 169 436.2839317639488 870.5533105946977 2 436.2834350466728 MULTI CID FTMS 0 0 0 5587 141269.078125 0.3595757277163948 -3 0.1235923767089843 11 Unmodified _SLPKKVSL_ ENSG00000111247|ENST00000352618|RAD51AP1;nc|ENSG00000111247|Q96B01|RAD51AP1 32.78568957990786 0.3549862272178655 1 {I|L}SPKK 5 5 50.278 0.0 0.0 5.7754 0.0 0.0 0.0 314.1827908808074 314.1827908808074 18.010299956639813 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}SPKK 5.7754 - 217 + 1 2.156 179269.9 1.0 2226 3370 5587 DOHH2_400M_050219_1,5598 DOHH2_400M_050219_1,5598,SLPKKVSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5599 30.388 45.0 1663900.0 25 0 153290.0 + 23497 LTKAAVELA 9 97 458.2790504116701 914.5435478901402 2 458.2790405154228 MULTI CID FTMS 0 0 0 5587 966316.0 0.5428291375553755 -2 0.0888481140136718 12 Unmodified _LTKAAVELA_ REV__ENSG00000141279|ENST00000322157|NPEPPS;REV__ENST00000602788.5_1_17:45660176-45669919:+|nuORF;REV__nc|ENSG00000141279|P55786-2|NPEPPS;REV__nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;REV__nc|ENSG00000274487|A6NEC2|NPEPPSL1 34.40172386719151 0.1061884637610825 1 {[QN]|[E{I|L}]|[KN]}{I|L}TS 5 -1 38.244 0.0 0.0 4.1818 0.0 0.0 0.0 368.23163782291255 368.23163782291255 -2.7965176454490006 0.0 -2.7965176454490006 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}TS 4.1818 - 445 + 1 2.156 65388.2 1.0 2227 3370 5587 DOHH2_400M_050219_1,5599 DOHH2_400M_050219_1,5599,LTKAAVELA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5600 30.391 177.0 387590.0 25 0 36283.0 + -1 VWPDKNGGCVS 11 76 609.7819692705483 1217.5493856078965 2 610.2832519412041 MULTI CID FTMS 0 0 0 5587 298668.71875 0.8537881975431723 -2 0.0888481140136718 13 Carbamidomethyl (C) _VWPDKNGGC(Carbamidomethyl (C))VS_ REV__ENSG00000161921|ENST00000293778|CXCL16 13.042465956692816 0.7638483625850725 1 [YG]GSGG{I|L} 7 -1 40.333 0.0 0.0 3.3126 0.0 0.0 0.0 623.2603893760435 623.2603893760435 16.80098137804969 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.363364334130467 0.0 [YG]GSGG{I|L} 3.3126 - 533 1 2.156 53177.5 1.0 2228 3370 5587 DOHH2_400M_050219_1,5600 DOHH2_400M_050219_1,5600,VWPDKNGGCVS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5601 30.397 256.0 269230.0 25 0 29929.0 + 8726 EVLQRGEAL 9 94 507.7828131501244 1013.5510733670488 2 507.7833129763603 MULTI CID FTMS 0 0 0 5587 233234.859375 0.7744833407303507 -1 0.081186294555664 14 Unmodified _EVLQRGEAL_ ENSG00000265808|ENST00000578049|SEC22B 53.832793166522166 0.0319663582346103 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}E{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{I|L} 9 3 + 45.543 0.0 0.0 4.4934 4.4934 75.679 0.0 0.0 0.0 10.232646631054152 16.255697080001774 10.232646631054152 3.0102999566398125 0 1.274227503252014 2.0 1.25 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}E{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}EA[RN]A{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}E{I|L}A{NN|[MP]|[D{I|L}]|[EV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}EA{I|L}{NN|[MP]|[D{I|L}]|[EV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}E{I|L}[W{I|L}]{I|L};{[DA]|[EG]}RQ{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{I|L};{[DA]|[EG]}RQ{I|L}A{NN|[MP]|[D{I|L}]|[EV]}{I|L};{[SA]|[TG]}R[RH]G{M(Oxidation (M))|F}A{I|L};{[DA]|[EG]}RQA{I|L}{NN|[MP]|[D{I|L}]|[EV]}{I|L};{[DA]|[EG]}R[AG]{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{I|L} 4.4934;4.1964;3.9957;3.6987;3.6536;2.5737;2.076;1.7884;1.779;1.6651 -;-;-;-;-;-;-;-;-;- 273 1 2.156 56305.7 1.0 2229 3370 5587 DOHH2_400M_050219_1,5601 DOHH2_400M_050219_1,5601,EVLQRGEAL True True EVLQRGEAL 30.397133 507.78331297636 1432550.75 5587.0 ENSG00000265808|ENST00000578049|SEC22B 5.021581808725993 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5602 30.401 207.0 244240.0 25 0 28150.0 -1 LNQKRMEDLQ 10 67 645.8255126682416 1289.636472403283 2 645.8259155154228 MULTI CID FTMS 0 0 0 5587 161365.671875 0.4927375222324399 -3 0.1235923767089843 15 Oxidation (M) _LNQKRM(Oxidation (M))EDLQ_ ENST00000504849.5_1_4:39329283-39344012:-|nuORF 34.93206674587334 0.2110832994570416 1 {[QV]|[N{I|L}]|[RA]|[KV]}[H{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DG{M(Oxidation (M))|F}{I|L}Q 11 -1 + 54.245 0.0 0.0 4.2062 4.2062 74.708 0.0 0.0 0.0 5.246685615228337 4.974028540887439 4.974028540887439 3.0102999566398125 0 1.3494850021680094 0.0 0.0 1.3539171939081172 {[QV]|[N{I|L}]|[RA]|[KV]}[H{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}HH[{I|L}P]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}[H{I|L}][WY]G{M(Oxidation (M))|F}{I|L}Q 4.2062;3.9728;3.6929 -;-;- 87 1 2.156 46790.6 1.0 2230 3370 5587 DOHH2_400M_050219_1,5602 DOHH2_400M_050219_1,5602,LNQKRMEDLQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5603 30.405 186.0 343800.0 25 0 34510.0 + 19157 LEDGRTLSDY 10 82 584.7773314400691 1167.5401099469382 2 584.7763549685478 MULTI CID FTMS 0 0 0 5587 127495.96875 0.3726412569660087 -2 0.0888481140136718 16 Unmodified _LEDGRTLSDY_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000597285.1_1_19:7730614-7730836:+|nuORF 47.7319792270244 0.0934623409360514 1 {I|L}ED 3 7 57.505 0.0 0.0 4.9253 0.0 0.0 0.0 807.3629844989467 807.3629844989467 17.340059088363233 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7059771852360797 0.0 + {I|L}ED 4.9253 + + 54 + 1 2.156 52850.9 1.0 2231 3370 5587 DOHH2_400M_050219_1,5603 DOHH2_400M_050219_1,5603,LEDGRTLSDY True True LEDGRTLSDY 30.404684 584.776354968548 1986898.875 5587.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;;ENST00000597285.1_1_19:7730614-7730836:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC;;ENST00000392399.3_1_2:137087013-137087097:-|nuORF 6.351864655812581 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5605 30.409 102.0 687550.0 25 0 54164.0 + 6878 EEEKNFKAF 9 105 381.18918820613294 1140.5457352185988 3 381.1889831423759 MULTI CID FTMS 0 0 0 5604 480992.96875 0.4563860045430522 2 -0.0536956787109375 1 Unmodified _EEEKNFKAF_ ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13 21.74664581756881 0.2544899275067181 1 KN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 6 3 17.802 0.0 0.0 1.5608 0.0 0.0 387.1283272884395 0.0 387.1283272884395 0.0 4.702906496733593 0.0 0.0 0 0.0 0.0 0.0 0.0 + KN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 1.5608 + + 126 + 1 2.156 62408.1 1.0 2232 3371 5604 DOHH2_400M_050219_1,5605 DOHH2_400M_050219_1,5605,EEEKNFKAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5606 30.413 201.0 430490.0 25 0 44107.0 + 13203 HGLIRKYGL 9 90 352.8821812889983 1055.624714467195 3 352.8817016482353 MULTI CID FTMS 0 0 0 5604 168546.90625 0.1144668644434129 5 -0.186920166015625 2 Unmodified _HGLIRKYGL_ ENSG00000213741|ENST00000245458|RPS29;ENST00000496507.1_1_4:25680486-25680639:+|nuORF;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50050387-50052826:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 28.486842064014134 0.1687311288560894 1 {I|L}HG{I|L}Y[RK]G{I|L} 9 3 + 50.116 0.0 0.0 4.7475 4.7475 76.577 0.0 0.0 0.0 31.26464070433734 13.662509289818416 13.662509289818416 3.0102999566398125 0 0.3807196863200844 0.0 0.0 0.4247425010840047 {I|L}HG{I|L}Y[RK]G{I|L};H{I|L}G{I|L}Y[RK]G{I|L} 4.7475;4.4624 -;- 47 + 1 2.156 72630.3 1.0 2233 3371 5604 DOHH2_400M_050219_1,5606 DOHH2_400M_050219_1,5606,HGLIRKYGL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5608 30.418 74.0 620530.0 25 0 79788.0 -1 DDFSVICQGFY 11 70 675.7892704141832 1349.5639878951663 2 675.7895385622978 MULTI CID FTMS 0 0 0 5607 605022.5 0.5540338632592257 -2 0.0813159942626953 1 Carbamidomethyl (C) _DDFSVIC(Carbamidomethyl (C))QGFY_ ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS 18.1463463914782 0.6576820063886638 1 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y 11 -1 + 66.929 0.0 0.0 4.9593 4.9593 77.158 0.0 0.0 0.0 3.010299956639805 3.6343197763047215 3.010299956639805 3.010299956639805 0 0.8935078169319297 0.0 1.0994850021680094 2.1549471895720984 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y;[HA]EENQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}N[HS]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]GGQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]N[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQQGGA{M(Oxidation (M))|F}Y;[HA]EENQQGGA{M(Oxidation (M))|F}Y;[HA]EENQ[AG]NA{M(Oxidation (M))|F}Y;[HA]EEN[AG]QNA{M(Oxidation (M))|F}Y 4.9593;4.7363;4.5562;4.2829;4.2829;4.2829;4.2829;4.0599;4.0599;4.0599 -;-;-;-;-;-;-;-;-;- 806 1 2.156 41212.2 1.0 2234 3372 5607 DOHH2_400M_050219_1,5608 DOHH2_400M_050219_1,5608,DDFSVICQGFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5609 30.42 104.0 765710.0 25 0 66777.0 + 7122 EEMPATKGGF 10 91 533.7469831797385 1065.479413426277 2 533.7476074099541 MULTI CID FTMS 0 0 0 5607 512882.5625 0.3121871089396728 -2 0.0813159942626953 2 Unmodified _EEMPATKGGF_ ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153 23.78978130925829 0.4341852049148378 1 EEMPAT 6 4 54.654 0.0 0.0 5.1295 0.0 0.0 0.0 404.1943269679104 404.1943269679104 27.130748253088512 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.4247425010840047 0.0 + EEMPAT 5.1295 + + 207 + 1 2.156 67012.2 1.0 2235 3372 5607 DOHH2_400M_050219_1,5609 DOHH2_400M_050219_1,5609,EEMPATKGGF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5610 30.424 190.0 296380.0 25 0 20017.0 + 15057 IMDDPAGNSY 10 102 541.726107516036 1081.437662098872 2 541.7266113162041 MULTI CID FTMS 0 0 0 5607 289497.6875 0.4709932158945618 -3 0.1625022888183593 3 Unmodified _IMDDPAGNSY_ ENSG00000109917|ENST00000227322|ZPR1 49.93300154707207 0.0805441195901191 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DDPA 6 4 27.867 0.0 0.0 2.5768 0.0 0.0 0.0 436.1478421127969 436.1478421127969 1.172137691284405 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DDPA 2.5768 + + 474 1 2.156 46590.7 1.0 2236 3372 5607 DOHH2_400M_050219_1,5610 DOHH2_400M_050219_1,5610,IMDDPAGNSY True True IMDDPAGNSY 30.423984 541.726611316204 3718957.25 5607.0 ENSG00000109917|ENST00000227322|ZPR1 7.840851783752441 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5611 30.427 153.0 351440.0 25 0 41220.0 -1 TKNERQVMK 9 81 575.3078541446714 1148.6011553561427 2 575.3082153201103 MULTI CID FTMS 0 0 0 5607 221961.046875 0.3078303926124383 -2 0.0813159942626953 4 Oxidation (M) _TKNERQVM(Oxidation (M))K_ ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A 19.256988751693697 0.3154191944385105 1 [KT]T[DV][{I|L}P]TTK 10 -1 42.751 0.0 0.0 3.722 0.0 0.0 0.0 60.97441588570646 60.97441588570646 25.88456367017097 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.860924374808178 0.0 [KT]T[DV][{I|L}P]TTK 3.722 - 178 1 2.156 49772.6 1.0 2237 3372 5607 DOHH2_400M_050219_1,5611 DOHH2_400M_050219_1,5611,TKNERQVMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5612 30.431 187.0 365700.0 25 0 24961.0 + 31770 RSEKMTLSY 9 109 557.7813399684937 1113.5481270037874 2 557.7816650271416 MULTI CID FTMS 0 0 0 5607 161410.75 0.941906504207369 -1 0.008615493774414 5 Unmodified _RSEKMTLSY_ ENSG00000101935|ENST00000262844|AMMECR1;nc|ENSG00000101935|Q9Y4X0-3|AMMECR1;nc|ENSG00000101935|Q9Y4X0-4|AMMECR1 24.99096001346401 0.2132109383330889 1 [QA]{I|L}ST{M(Oxidation (M))|F}VVSY 10 7 + 33.178 0.0 0.0 2.9795 2.9795 75.218 0.0 0.0 0.0 4.594465368295886 6.901056208558028 4.594465368295886 6.901056208558028 0 0.6237125054200234 0.0 0.3807196863200844 0.0 [QA]{I|L}ST{M(Oxidation (M))|F}VVSY;[VS]WKMT{I|L}SY;[HM]{I|L}TMK[PA]W;[VS][VS]QMT{I|L}SY;{[TV]|[{I|L}S]}[TA]QMT{I|L}SY;[KA]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]}T{I|L}SY;{[{M(Oxidation (M))|F}C]|[YS]}[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}SY;[VS][VS]A{[MG]|[TS]}T{I|L}SY;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}SY;[VS]WK[DV]S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 2.9795;2.3597;1.7771;1.3036;1.1203;0.72796;0.62995;0.26232;0.24741;0.12327 -;-;-;-;-;-;-;-;-;- 529 + 1 2.156 56564.4 1.0 2238 3372 5607 DOHH2_400M_050219_1,5612 DOHH2_400M_050219_1,5612,RSEKMTLSY False True RSEKMTLSY 30.430647 557.781665027142 1013924.125 5607.0 ENSG00000101935|ENST00000262844|AMMECR1;;nc|ENSG00000101935|Q9Y4X0-3|AMMECR1;;nc|ENSG00000101935|Q9Y4X0-4|AMMECR1 6.892718474070231 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5613 30.444 800.0 136170.0 25 0 45335.0 7669 EKKNRGWTHW 10 113 671.3445828631588 0 671.3419677615166 PEAK CID FTMS 0 0 0 5607 118900.1640625 0.6711557761731738 -6 0.2356853485107422 6 Unmodified _EKKNRGWTHW_ ENSG00000162444|ENST00000294435|RBP7;ENST00000315901.4_1_1:10057339-10075887:+|nuORF 23.78978130925829 0.2677467798970439 1 T[TP]E[WH]KE 8 9 23.894 0.0 0.0 1.7822 0.0 0.0 204.1042643788499 125.07242761783438 329.17669199668427 0.0 0.0 0.0 0.0 0 1.3807196863200843 0.0 1.274227503252014 0.0 T[TP]E[WH]KE 1.7822 - 201 + 1 2.156 83211.1 0.6200000047683716 2239 3372 5607 DOHH2_400M_050219_1,5613 DOHH2_400M_050219_1,5613,EKKNRGWTHW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5614 30.454 564.0 364820.0 25 0 48235.0 + 16649 KELEEIEKY 9 204 394.2083442858906 1179.6032034578718 3 394.2079040408134 MULTI CID FTMS 0 0 0 5607 78100.125 0.1459138353091299 -2 0.0813159942626953 7 Unmodified _KELEEIEKY_ REV__ENSG00000244754|ENST00000267068|N4BP2L2;REV__nc|ENSG00000244754|Q92802-2|N4BP2L2 29.84058131909904 0.1515068451768857 1 [K{I|L}]EEY[K{I|L}]EE 9 -1 + 25.441 0.0 0.0 2.1567 2.1567 70.425 0.0 0.0 0.0 2.045059004810032 4.22044985140651 2.045059004810032 3.3576348072821176 0 0.4247425010840047 0.0 1.055462187404089 0.1307196863200844 [K{I|L}]EEY[K{I|L}]EE;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}EY[K{I|L}]EE;[QA][TA]KE{I|L}[WH]P;[{M(Oxidation (M))|F}E][K{I|L}]Y[R{I|L}]DP;[QA][TA]KE{I|L}{[CA]|SS}V{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][K{I|L}]Y{[RE]|[WV]}VP;[{I|L}T][VG]EY[K{I|L}]EE;[QA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NK[PA]TPP;[K{I|L}]EK{I|L}[YE]EE 2.1567;1.8721;1.4799;0.94809;0.84739;0.6756;0.46813;0.2114;0.093042 -;-;-;-;-;-;-;-;- 495 1 2.156 158103.0 1.0 2240 3372 5607 DOHH2_400M_050219_1,5614 DOHH2_400M_050219_1,5614,KELEEIEKY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5615 30.458 218.0 345730.0 25 0 94024.0 + 43369 TSYVRTTI 8 89 470.2574714841707 0 470.2588989138603 PEAK CID FTMS 0 0 0 5607 233833.78125 0.7848159589474354 3 -0.1712417602539062 8 Unmodified _WPWLVPAA_ ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;ENST00000464124.2_1_5:124144562-124144799:-|nuORF;nc|ENSG00000108107|P46779-3|RPL28 2.889219685676258 0.5898224805723975 1 Y 1 8 6.9897 0.0 0.0 0.74477 0.0 0.0 187.07901659939768 585.3380831354124 772.4170997348101 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.74477 - 16 + 1 2.156 65443.3 1.0 2241 3372 5607 DOHH2_400M_050219_1,5615 DOHH2_400M_050219_1,5615,WPWLVPAA False False TSYVRTTI 30.458486 470.25889891386 1165968.625 5607.0 ENSG00000108107|ENST00000344063|RPL28;;nc|ENSG00000108107|P46779-2|RPL28;;ENST00000464124.2_1_5:124144562-124144799:-|nuORF;;nc|ENSG00000108107|P46779-3|RPL28 0.6491672098636627 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5617 30.463 22.0 2391300.0 25 0 376080.0 + 9478 FLDESRSTQY 10 59 623.2909170671036 1244.567281201007 2 623.2913085818291 MULTI CID FTMS 0 0 0 5616 2058998.625 0.2591520279446373 3 -0.1332244873046875 1 Unmodified _FLDESRSTQY_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 57.24910588100465 0.0438022649904578 1 ED{I|L}E 4 9 44.993 0.0 0.0 3.6151 0.0 0.0 740.3478505157943 0.0 740.3478505157943 0.0 20.95175337211301 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 ED{I|L}E 3.6151 - 48 1 2.156 47355.7 1.0 2242 3373 5616 DOHH2_400M_050219_1,5617 DOHH2_400M_050219_1,5617,FLDESRSTQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5618 30.466 113.0 503560.0 25 0 43456.0 + 33644 SISKAFHAL 9 113 487.2785596117625 972.542566290325 2 487.2786437869072 MULTI CID FTMS 0 0 0 5616 327533.9375 0.2157919720692001 3 -0.1332244873046875 2 Unmodified _SISKAFHAL_ REV__ENSG00000176731|ENST00000619594|RBIS 11.640296217721598 0.521594087909532 1 VM 2 -1 20.969 0.0 0.0 2.1561 0.0 0.0 724.4231795489172 0.0 724.4231795489172 0.0 9.3753063169585 0.0 0.0 0 0.0 0.0 0.0 0.0 VM 2.1561 - 323 + 1 2.156 50127.4 1.0 2243 3373 5616 DOHH2_400M_050219_1,5618 DOHH2_400M_050219_1,5618,SISKAFHAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5619 30.468 98.0 623520.0 25 0 70779.0 + 37947 TMEGGTLKY 9 93 500.244604915004 998.474656896808 2 500.2451660037041 MULTI CID FTMS 0 0 0 5616 477282.0 0.6399388059740265 -1 0.0450801849365234 3 Unmodified _TMEGGTLKY_ ENSG00000197943|ENST00000564138|PLCG2;ENST00000567980.5_1_16:81819579-81955027:+|nuORF 27.628801355627647 0.1796483985696185 1 TME[VG][TA]KY 9 2 + 59.962 0.0 0.0 6.0054 6.0054 92.851 0.0 0.0 0.0 32.19847844573414 0.915149811213496 0.915149811213496 39.30807251759644 0 0.8882104921644451 1.6989700043360187 0.4247425010840047 0.0 TME[VG][TA]KY;{[{M(Oxidation (M))|F}C]|[YS]}YK{I|L}YY;{[{M(Oxidation (M))|F}C]|[YS]}Y[Y{I|L}]KY 6.0054;2.0686;1.9996 -;-;- 119 + 1 2.156 51472.7 1.0 2244 3373 5616 DOHH2_400M_050219_1,5619 DOHH2_400M_050219_1,5619,TMEGGTLKY False True TMEGGTLKY 30.467667 500.245166003704 3765618.0 5616.0 ENST00000567980.5_1_16:81819579-81955027:+|nuORF;;ENSG00000197943|ENST00000564138|PLCG2 2.998724460601806 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5620 30.47 123.0 624540.0 25 0 129440.0 + 38838 TVIAVGTV 8 100 380.2342094754534 758.4538660177068 2 380.2339050173759 MULTI CID FTMS 0 0 0 5616 401294.46875 1.0 0 0.0 4 Unmodified _TVIAVGTV_ REV__ENSG00000158296|ENST00000279027|SLC13A3;REV__nc|ENSG00000158296|Q8WWT9-3|SLC13A3;REV__nc|ENSG00000158296|Q8WWT9-5|SLC13A3;REV__nc|ENSG00000158296|Q8WWT9-6|SLC13A3 23.1484247019978 0.5573009939494978 1 {[TV]|[{I|L}S]}{I|L}AEVK 7 -1 + 60.457 0.0 0.0 7.9711 7.9711 97.966 0.0 0.0 0.0 32.25257649630901 13.557308577055728 13.557308577055728 60.457058584657126 0 0.6203715150305281 2.0 0.3494850021680094 0.1462566630072955 {[TV]|[{I|L}S]}{I|L}AEVK 7.9711 - 89 + 1 2.156 66561.5 1.0 2245 3373 5616 DOHH2_400M_050219_1,5620 DOHH2_400M_050219_1,5620,TVIAVGTV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5621 30.473 164.0 443600.0 25 0 56843.0 + 825 AETDFEKRDF 10 79 419.8638441512412 1256.5697030539236 3 419.8630859255791 MULTI CID FTMS 0 0 0 5616 329332.25 0.9499088771313644 -1 0.0450801849365234 5 Unmodified _AETDFEKRDF_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 35.61225514009592 0.2039006631696762 1 AETD{M(Oxidation (M))|F}EK 7 3 82.383 0.0 0.0 6.5562 0.0 0.0 0.0 433.18467127017817 433.18467127017817 53.44289794261748 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.3494850021680094 0.0 + AETD{M(Oxidation (M))|F}EK 6.5562 + + 374 + 1 2.156 61030.6 1.0 2246 3373 5616 DOHH2_400M_050219_1,5621 DOHH2_400M_050219_1,5621,AETDFEKRDF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5622 30.478 246.0 363810.0 25 0 31718.0 -1 YKCNMGYEYSE 11 101 730.2812520862776 1458.5479512393551 2 730.2806274294853 MULTI CID FTMS 0 0 0 5616 243625.84375 0.7327482145433475 -3 0.1263961791992187 6 Carbamidomethyl (C),Oxidation (M) _YKC(Carbamidomethyl (C))NM(Oxidation (M))GYEYSE_ ENSG00000000971|ENST00000367429|CFH;ENST00000466229.5_1_1:196648727-196709933:+|nuORF;nc|ENSG00000000971|P08603-2|CFH;nc|ENSG00000000971|P08603|CFH 7.101721422024254 0.8416415510090076 1 HDQA 4 -1 34.315 0.0 0.0 2.3527 0.0 0.0 199.09669668290263 805.2699068658811 1004.3666035487838 0.0 0.0 0.0 0.0 0 1.0 0.0 0.6747425010840047 0.7302046884880937 HDQA 2.3527 - 238 + 1 2.156 67609.7 1.0 2247 3373 5616 DOHH2_400M_050219_1,5622 DOHH2_400M_050219_1,5622,YKCNMGYEYSE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5623 30.492 800.0 245940.0 25 0 14655.0 + 7062 EELKELKEY 9 160 590.8085114870593 1179.6024700409184 2 590.8085204958916 MULTI CID FTMS 0 0 0 5616 148197.515625 0.5434843472875523 -1 0.0450801849365234 7 Unmodified _EELKELKEY_ ENSG00000172775|ENST00000309137|PSME3IP1 110.79276546118962 0.005272472070827 1 EE{I|L}KK{I|L}EEY 9 2 + 76.555 0.0 0.0 6.4899 6.4899 91.328 0.0 0.0 0.0 9.281345554804687 52.11812184018221 9.281345554804687 11.7609125905568 0 2.1237125054200234 1.5228787452803376 2.1549471895720984 0.0 EE{I|L}KK{I|L}EEY;EE{I|L}KK{I|L}EYE;Y[RH]{I|L}[TA]KEY;Y[RH][TA]{I|L}KEY;{[QN]|[E{I|L}]|[KN]}EKK{I|L}EEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[K{I|L}]E{I|L}EEY;[DP]{I|L}[R{M(Oxidation (M))|F}]{I|L}KEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[K{I|L}]{I|L}EEEY;[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}KKNKEY;{[QN]|[E{I|L}]|[KN]}KKE{I|L}EEY 6.4899;5.4929;4.1209;4.0787;3.777;3.6731;3.5851;3.3553;3.2573;3.2288 -;-;-;-;-;-;-;-;-;- 1294 1 2.156 144160.5 0.6800000071525574 2248 3373 5616 DOHH2_400M_050219_1,5623 DOHH2_400M_050219_1,5623,EELKELKEY True True EELKELKEY 30.491842 590.808520495892 3495262.75 5616.0 ENSG00000172775|ENST00000309137|PSME3IP1 6.437010765075684 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5624 30.497 268.0 322350.0 25 0 17895.0 + 40901 VLRVTHEL 8 103 483.79039108442896 965.566229235658 2 483.7907897830009 MULTI CID FTMS 0 0 0 5616 140428.125 0.7711613093490846 1 -0.0701656341552734 8 Unmodified _VLRVTHEL_ ENSG00000165916|ENST00000298852|PSMC3;ENST00000528362.1_1_11:47446139-47447800:-|nuORF;ENST00000531653.5_1_11:47445967-47447800:-|nuORF 19.256988751693697 0.6264283240490721 1 [{I|L}V]R{[TV]|[{I|L}S]}HE{I|L} 8 0 + 37.111 0.0 0.0 3.8434 3.8434 83.339 0.0 0.0 0.0 9.25714160714606 25.32814534489557 9.25714160714606 15.836134377877327 0 0.6171302707394362 1.2218487496163564 0.3807196863200844 0.0 + + [{I|L}V]R{[TV]|[{I|L}S]}HE{I|L};[{I|L}V]R[VG]Y{M(Oxidation (M))|F}{I|L};[{I|L}V]R{[YC]|[HE]}{[TV]|[{I|L}S]}{I|L};[{I|L}V]V{[NV]|[RG]}Y{M(Oxidation (M))|F}{I|L};[{I|L}V]V[WH]{[TV]|[{I|L}S]}{I|L} 3.8434;2.2033;1.6908;1.6399;1.1274 +;-;-;-;- + 122 1 2.156 69747.4 1.0 2249 3373 5616 DOHH2_400M_050219_1,5624 DOHH2_400M_050219_1,5624,VLRVTHEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5625 30.511 800.0 233340.0 25 0 11574.0 + 826 AETDFEKRDF 10 133 629.2920735417131 1256.569594150226 2 629.2916747927666 MULTI CID FTMS 0 0 0 5616 119157.578125 0.5585648252080001 -1 0.0450801849365234 9 Unmodified _AETDFEKRDF_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 74.7717668357584 0.0187829169580365 1 AETD{M(Oxidation (M))|F}EKRD{M(Oxidation (M))|F} 10 0 + 101.81 0.0 0.0 8.1021 8.1021 88.56 0.0 0.0 0.0 63.47001051493628 11.009621213437 11.009621213437 5.40681824374424 0 1.9698565171985367 1.6989700043360187 1.333839506110969 0.0 + + AETD{M(Oxidation (M))|F}EKRD{M(Oxidation (M))|F};AET{M(Oxidation (M))|F}DEKRD{M(Oxidation (M))|F};AE{M(Oxidation (M))|F}TDEKRD{M(Oxidation (M))|F};AETD{M(Oxidation (M))|F}EK{M(Oxidation (M))|F}[RD];AET{M(Oxidation (M))|F}DEK{M(Oxidation (M))|F}[RD];AE{M(Oxidation (M))|F}TDEK{M(Oxidation (M))|F}[RD];AET{M(Oxidation (M))|F}WWRD{M(Oxidation (M))|F};AETD{M(Oxidation (M))|F}EK[YT][PG];AE{M(Oxidation (M))|F}TWWRD{M(Oxidation (M))|F};AET{M(Oxidation (M))|F}DEK[YT][PG] 8.1021;7.6718;7.4322;6.9473;6.517;6.2775;5.6695;5.4551;5.4299;5.0248 +;-;-;-;-;-;-;-;-;- + 2123 + 1 2.156 139867.3 0.6299999952316284 2250 3373 5616 DOHH2_400M_050219_1,5625 DOHH2_400M_050219_1,5625,AETDFEKRDF True True AETDFEKRDF 30.510626 629.2923 2775775.4375 5616.0 ENSG00000168259|ENST00000457167|DNAJC7;;nc|ENSG00000168259|Q99615-2|DNAJC7 7.379067420959473 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5626 30.515 229.0 296830.0 25 0 20731.0 31313 RMEVLIASL 9 106 516.3016670720928 0 516.3012573122978 PEAK CID FTMS 0 0 0 5616 201532.65625 0.3574789688092491 -12 0.6834392547607422 10 Unmodified _RMEVLIASL_ ENSG00000135476|ENST00000257934|ESPL1;nc|ENSG00000135476|Q14674-2|ESPL1 10.823927491677226 0.3028200641087142 1 K 1 9 5.4846 0.0 0.0 0.53218 0.0 0.0 242.10970475441144 657.3579195611936 899.467624315605 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.53218 - 7 + 1 2.156 58883.9 1.0 2251 3373 5616 DOHH2_400M_050219_1,5626 DOHH2_400M_050219_1,5626,RMEVLIASL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5627 30.529 800.0 369420.0 25 0 14216.0 -1 WMDEFKDFFY 10 175 722.2970290194415 1442.579505105683 2 722.2980224490166 MULTI CID FTMS 0 0 0 5616 173106.359375 0.8464339328814101 -3 0.1263961791992187 11 Oxidation (M) _WM(Oxidation (M))DEFKDFFY_ ENSG00000144278|ENST00000392825|GALNT13;ENST00000431076.5_1_2:155098684-155265690:+|nuORF;nc|ENSG00000144278|Q8IUC8-2|GALNT13;nc|ENSG00000144278|Q8IUC8-3|GALNT13 13.90604991867851 0.6142120002215601 1 [QA]HDEAQTYA{M(Oxidation (M))|F}Y 12 -1 + 96.631 0.0 0.0 6.6985 6.6985 84.311 0.0 0.0 0.0 8.212324433608089 14.226208160867884 8.212324433608089 3.818108876706958 0 3.832129649978392 0.6575773191777937 0.7396518287104438 1.1307196863200843 [QA]HDEAQTYA{M(Oxidation (M))|F}Y;[QA]HDEA{[YD]|[{M(Oxidation (M))|F}M]}NA{M(Oxidation (M))|F}Y;[QA]HDE[WY]NA{M(Oxidation (M))|F}Y;[AG]AHDEAQTYA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]TYA{M(Oxidation (M))|F}Y;[AG]AHDEA{[YD]|[{M(Oxidation (M))|F}M]}NA{M(Oxidation (M))|F}Y;[QA]HDEA{[YD]|[{M(Oxidation (M))|F}M]}GGA{M(Oxidation (M))|F}Y;[QA]HDE[NP][HD]A{M(Oxidation (M))|F}Y;[AG]AHDE[WY]NA{M(Oxidation (M))|F}Y;[QA]HD[DP]QA[HD]{M(Oxidation (M))|F}Y 6.6985;6.4338;6.1656;6.1292;6.0678;5.8646;5.8032;5.7583;5.5942;5.54 -;-;-;-;-;-;-;-;-;- 23352 1 2.156 202776.6 0.7400000095367432 2252 3373 5616 DOHH2_400M_050219_1,5627 DOHH2_400M_050219_1,5627,WMDEFKDFFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5629 30.533 24.0 2369200.0 25 0 374430.0 + 8934 FAMNDESVFY 10 59 611.7596868910786 1221.504820848957 2 611.7599975466728 MULTI CID FTMS 0 0 0 5628 2518822.5 0.9981866714855652 -1 0.0701656341552734 1 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 19.256988751693697 0.5244284437930726 1 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 68.862 0.0 0.0 5.6374 5.6374 85.818 0.0 0.0 0.0 4.884381005764311 56.73897777978805 4.884381005764311 9.164539485499256 0 1.0 0.0 0.0 0.4247425010840047 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;[HD][RN]WNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[CS][VS]NA{M(Oxidation (M))|F}Y;[HD][RN]WGGA{M(Oxidation (M))|F}Y 5.6374;4.8872;4.8872;4.8872;4.1399;4.1399;4.1399;3.9582;3.7143;3.2044 -;-;-;-;-;-;-;-;-;- 222 1 2.15 48721.5 1.0 2253 3374 5628 DOHH2_400M_050219_1,5629 DOHH2_400M_050219_1,5629,FAMNDESVFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5630 30.54 389.0 212640.0 25 0 14711.0 + 19144 LEAFRQALK 9 116 538.3165395477707 1074.6185261623414 2 538.3172485232353 MULTI CID FTMS 0 0 0 5628 138571.078125 0.3341620929460216 4 -0.1573772430419922 2 Unmodified _LEAFRQALK_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 22.736283301280096 0.2418982879461534 1 KSE 3 9 28.94 0.0 0.0 2.6931 0.0 0.0 712.424608299025 0.0 712.424608299025 0.0 2.731363019014019 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 KSE 2.6931 - 188 1 2.15 67826.5 1.0 2254 3374 5628 DOHH2_400M_050219_1,5630 DOHH2_400M_050219_1,5630,LEAFRQALK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5631 30.542 72.0 747140.0 25 0 43594.0 + 16167 IVDHNIADY 9 104 530.2583325377698 1058.5021121423397 2 530.2583495974541 MULTI CID FTMS 0 0 0 5628 454808.0 0.7201890779776431 -1 0.0701656341552734 3 Unmodified _IVDHNIADY_ ENSG00000174231|ENST00000304992|PRPF8 19.361941925380144 0.3125782356748823 1 [HD]N{I|L}V{I|L}ADY 9 4 + 45.868 0.0 0.0 4.3333 4.3333 77.78 0.0 0.0 0.0 2.6312881885056782 38.39403206983519 2.6312881885056782 5.528419686577806 0 0.9247425010840048 0.0 0.0 0.0 [HD]N{I|L}V{I|L}ADY;{[{M(Oxidation (M))|F}C]|[YS]}[QT]V{I|L}ADY;[HD]N{I|L}VA{I|L}DY;[HD]GG{I|L}V{I|L}ADY;{[DA]|[EG]}[RH]V{I|L}ADY;[HD]N{I|L}AV{I|L}DY;{[{M(Oxidation (M))|F}C]|[YS]}[QT]VA{I|L}DY;{[QV]|[N{I|L}]|[RA]|[KV]}[HD]V{I|L}ADY;[HD]N{I|L}VAD{I|L}Y;[HD]GG{I|L}VA{I|L}DY 4.3333;3.811;3.7645;3.4634;3.4351;3.3138;3.2422;3.043;3.0078;2.8946 -;-;-;-;-;-;-;-;-;- 436 1 2.15 46120.9 1.0 2255 3374 5628 DOHH2_400M_050219_1,5631 DOHH2_400M_050219_1,5631,IVDHNIADY False True IVDHNIADY 30.542029 530.258349597454 3308502.75 5628.0 ENSG00000174231|ENST00000304992|PRPF8 6.661790053049724 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5632 30.545 161.0 324680.0 25 0 15628.0 + 6869 EEEGDRVITY 10 94 605.7838839456514 1209.553214958103 2 605.7825805544853 MULTI CID FTMS 0 0 0 5628 213289.0625 1.0 0 0.0 4 Unmodified _EEEGDRVITY_ ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A 25.997395711884035 0.38458358153512 1 EEE 3 7 30.942 0.0 0.0 2.5581 0.0 0.0 0.0 819.4008272760374 819.4008272760374 8.26097812279194 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + EEE 2.5581 + + 96 + 1 2.15 43490.5 1.0 2256 3374 5628 DOHH2_400M_050219_1,5632 DOHH2_400M_050219_1,5632,EEEGDRVITY False True EEEGDRVITY 30.545206 605.782580554485 1734665.5 5628.0 nc|ENSG00000139842|Q13619-2|CUL4A;;ENSG00000139842|ENST00000375440|CUL4A 6.683274586995442 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5633 30.549 180.0 641310.0 25 0 144710.0 + 35284 SSLSRTEGF 9 94 492.2431870383856 982.4718211435712 2 492.2428466677666 MULTI CID FTMS 0 0 0 5628 148930.640625 0.7453220714558448 -1 0.0701656341552734 5 Unmodified _SSLSRTEGF_ REV__ENST00000498152.1_1_3:113346508-113346667:+|nuORF 11.640296217721598 0.521594087909532 1 G{M(Oxidation (M))|F} 2 -1 20.969 0.0 0.0 2.1343 0.0 0.0 760.3710196072415 0.0 760.3710196072415 0.0 -0.1226368582319104 -0.1226368582319104 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 2.1343 + + 192 + 1 2.15 92880.7 1.0 2257 3374 5628 DOHH2_400M_050219_1,5633 DOHH2_400M_050219_1,5633,SSLSRTEGF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5634 30.563 800.0 78596.0 25 0 6003.0 -1 HDTYCCLCTNM 11 102 737.7645059195962 1473.5144589059923 2 738.2670776247978 MULTI CID FTMS 0 0 0 5628 135108.25 0.8417782492112704 -2 0.1152458190917968 6 3 Carbamidomethyl (C) _HDTYC(Carbamidomethyl (C))C(Carbamidomethyl (C))LC(Carbamidomethyl (C))TNM_ ENSG00000107938|ENST00000356792|EDRF1;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;ENST00000525091.5_1_10:127408310-127436620:+|nuORF;nc|ENSG00000107938|Q3B7T1-3|EDRF1;nc|ENSG00000107938|Q3B7T1-5|EDRF1 0.3070304955306653 0.8736993455979228 1 [EP]TA{[QN]|[E{I|L}]|[KN]}QAE 9 -1 24.252 0.0 0.0 1.6459 0.0 0.0 0.0 502.0798128717407 502.0798128717407 11.064513632237162 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 [EP]TA{[QN]|[E{I|L}]|[KN]}QAE 1.6459 - 199 + 1 2.15 47230.3 0.6800000071525574 2258 3374 5628 DOHH2_400M_050219_1,5634 DOHH2_400M_050219_1,5634,HDTYCCLCTNM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5635 30.569 365.0 249770.0 25 0 13238.0 + -1 VADKVHLMY 9 150 364.5232697782786 1090.547979935036 3 364.5229980349541 MULTI CID FTMS 0 0 0 5628 123435.0703125 1.0 0 0.0 7 Oxidation (M) _VADKVHLM(Oxidation (M))Y_ ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF 10.799506525563784 0.5443532743200366 1 YWK 3 -1 23.188 0.0 0.0 2.1262 0.0 0.0 0.0 610.3003634088499 610.3003634088499 7.535830588929073 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YWK 2.1262 - 103 + 1 2.15 78297.0 1.0 2259 3374 5628 DOHH2_400M_050219_1,5635 DOHH2_400M_050219_1,5635,VADKVHLMY False False VADKVHLMY 30.569107 364.522998034954 580124.9375 5628.0 ENSG00000121060|ENST00000316881|TRIM25;;ENST00000572021.5_1_17:54969063-54989474:-|nuORF 2.677621761957804 3.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5636 30.578 505.0 208360.0 25 0 16576.0 + 5602 RELISDNQY 9 112 569.2801528158122 1136.5457526984244 2 569.2782470583916 MULTI CID FTMS 0 0 0 5628 122329.578125 0.4912443279962207 -1 0.0701656341552734 8 Unmodified _DNSIRELQY_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 49.93300154707207 0.0405168250806675 1 {[RE]|[WV]}{I|L}{I|L}SDNQY 9 6 + 66.604 0.0 0.0 5.8602 5.8602 87.576 0.0 0.0 0.0 3.65279269351241 51.41441272380455 3.65279269351241 9.208187539523747 0 0.8494850021680094 0.0 0.6237125054200234 0.4247425010840047 {[RE]|[WV]}{I|L}{I|L}SDNQY;{[RE]|[WV]}{I|L}{I|L}SDGGQY;{[RE]|[WV]}{I|L}{I|L}SDN[AG]Y;{[RE]|[WV]}{I|L}{I|L}SDGG[AG]Y;{[RE]|[WV]}[WP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QY;[EP][WR]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QY 5.8602;5.05;5.05;4.2437;2.0142;1.7896 -;-;-;-;-;- 263 1 2.15 83830.1 1.0 2260 3374 5628 DOHH2_400M_050219_1,5636 DOHH2_400M_050219_1,5636,DNSIRELQY True False RELISDNQY 30.578023 569.278247058392 927157.25 5628.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 6.941300868988037 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5637 30.585 376.0 247070.0 25 0 15245.0 8100 EPGARTPVA 9 143 449.2433098020605 896.472066670921 2 449.2428161501884 MULTI CID FTMS 0 0 0 5628 101453.78125 0.7137781374677452 -1 0.0701656341552734 9 Unmodified _EPGARTPVA_ nc|ENSG00000077327|O75602-3|SPAG6 31.26834338654808 0.1333407332142048 1 [EP]GAR[PS]A{I|L} 9 3 + 41.919 0.0 0.0 4.676 4.676 80.547 0.0 0.0 0.0 16.767280648681734 1.0924374808178143 1.0924374808178143 7.155391057692121 0 1.064909327626439 1.3979400086720375 0.0 0.0 [EP]GAR[PS]A{I|L};[EP]GAR[TA]PV;[EP]GAR[PS]{I|L}A;[EP]QR[PS]A{I|L};[EP]GAR[TA]VP;[EP]G[RK]DPV;[EP]QR[TA]PV;[EP]G[RK]DVP;[EP]QR[PS]{I|L}A;[EP]QR[TA]VP 4.676;3.8778;3.6392;3.5905;3.3759;3.0726;2.7924;2.5707;2.5538;2.2904 -;-;-;-;-;-;-;-;-;- 341 + 1 2.15 73225.5 1.0 2261 3374 5628 DOHH2_400M_050219_1,5637 DOHH2_400M_050219_1,5637,EPGARTPVA False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 5639 30.589 2.3 21006000.0 25 0 2414100.0 8617 EVEEDEYKAFY 11 72 711.3076441748542 1420.6007354165083 2 711.3092529177666 MULTI CID FTMS 0 0 0 5638 24453282.0 1.0 0 0.0 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 1 EAQNQA{M(Oxidation (M))|F}Y 8 7 57.071 0.0 0.0 4.0174 0.0 0.0 451.1815968244157 0.0 451.1815968244157 0.0 40.08146596900417 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.8494850021680094 EAQNQA{M(Oxidation (M))|F}Y 4.0174 - 372 1 2.15 41210.7 1.0 2262 3375 5638 DOHH2_400M_050219_1,5639 DOHH2_400M_050219_1,5639,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5640 30.592 119.0 488110.0 25 0 58713.0 + 44469 YNIQKESTL 9 99 548.2863684459732 1094.5581839587462 2 548.2863647341728 MULTI CID FTMS 0 0 0 5638 444671.84375 0.6266218870922355 -2 0.1261615753173828 2 Unmodified _YNIQKESTL_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000475545.1_1_17:10162090-10162312:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 53.832793166522166 0.0319663582346103 1 YN{I|L}QRSTT{I|L} 9 3 + 75.844 0.0 0.0 6.9292 6.9292 90.648 0.0 0.0 0.0 60.15994091163676 12.351905544230348 12.351905544230348 9.208187539523747 0 0.9247425010840048 1.3010299956639813 0.9247425010840048 0.3807196863200844 YN{I|L}QRSTT{I|L};YN{I|L}[AG]RSTT{I|L};YN{I|L}Q[VG]STT{I|L};YN{I|L}[AG][VG]STT{I|L};YGG{I|L}QRSTT{I|L};YN{I|L}[WK]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};YGG{I|L}[AG]RSTT{I|L};YGG{I|L}Q[VG]STT{I|L};YN[YR]{[NV]|[RG]}A[VP];YN[RN][{I|L}T]TT{I|L} 6.9292;6.0879;6.0879;4.9028;4.8993;4.8155;4.062;4.062;3.1686;3.0433 -;-;-;-;-;-;-;-;-;- 272 + 1 2.15 50691.3 1.0 2263 3375 5638 DOHH2_400M_050219_1,5640 DOHH2_400M_050219_1,5640,YNIQKESTL True True YNIQKESTL 30.591825 548.286364734173 3686024.75 5638.0 ENST00000475545.1_1_17:10162090-10162312:+|nuORF;;ENSG00000143947|ENST00000272317|RPS27A;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC;;ENST00000392399.3_1_2:137087013-137087097:-|nuORF 6.896968364715576 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5642 30.596 43.0 1312300.0 25 0 144990.0 + 2540 ASEFPGAQHY 10 83 553.7487966257635 1105.4830403183269 2 553.7490722537041 MULTI CID FTMS 0 0 0 5641 1223694.125 1.0 0 0.0 1 Unmodified _ASEFPGAQHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000566509.5_1_15:73052730-73067416:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-5|ADPGK 36.12702656103203 0.1984647928738587 1 {[SA]|[TG]}E{[WT]|[RM]}P{M(Oxidation (M))|F} 7 7 34.415 0.0 0.0 3.1131 0.0 0.0 0.0 284.08927746115813 284.08927746115813 21.940381874714348 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.424742501084005 0.0 {[SA]|[TG]}E{[WT]|[RM]}P{M(Oxidation (M))|F} 3.1131 - 311 1 2.15 47490.8 1.0 2264 3376 5641 DOHH2_400M_050219_1,5642 DOHH2_400M_050219_1,5642,ASEFPGAQHY False True ASEFPGAQHY 30.596402 553.749072253704 42778602.0 5641.0 ENST00000567941.5_1_15:73044684-73075795:-|nuORF;;ENSG00000159322|ENST00000456471|ADPGK;;nc|ENSG00000159322|Q9BRR6-2|ADPGK;;nc|ENSG00000159322|Q9BRR6-5|ADPGK;;ENST00000566509.5_1_15:73052730-73067416:-|nuORF 8.704233805338541 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5643 30.598 70.0 959430.0 25 0 100380.0 + 35255 SSFIGKVKS 9 82 476.7768521628333 951.5391513924668 2 476.7768127322197 MULTI CID FTMS 0 0 0 5641 778835.5625 0.1954272077555063 -2 0.063058853149414 2 Unmodified _SSFIGKVKS_ REV__ENST00000335500.8_1_17:42474164-42474308:-|nuORF 32.78568957990786 0.1150597335874693 1 SS{M(Oxidation (M))|F}{I|L}SKVGK 9 -1 + 83.652 0.0 0.0 8.7912 8.7912 99.036 0.0 0.0 0.0 66.82059191820639 9.362915595803017 9.362915595803017 83.65211680846738 0 0.7614393726401688 1.6989700043360187 0.7614393726401688 0.0 SS{M(Oxidation (M))|F}{I|L}SKVGK 8.7912 - 111 + 1 2.15 56318.2 1.0 2265 3376 5641 DOHH2_400M_050219_1,5643 DOHH2_400M_050219_1,5643,SSFIGKVKS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5644 30.601 128.0 943380.0 25 0 251360.0 7772 ELGARVRAL 9 81 492.8010486328253 983.5875443324506 2 492.8013488650322 MULTI CID FTMS 0 0 0 5641 513085.78125 0.3839456947979285 -2 0.063058853149414 3 Unmodified _ELGARVRAL_ ENSG00000167513|ENST00000301019|CDT1 32.30548876998284 0.1201446275138228 1 {I|L}E 2 8 43.271 0.0 0.0 4.3993 0.0 0.0 0.0 738.437118822658 738.437118822658 27.034021960761265 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {I|L}E 4.3993 - 43 + 1 2.15 98678.3 1.0 2266 3376 5641 DOHH2_400M_050219_1,5644 DOHH2_400M_050219_1,5644,ELGARVRAL True True TDRRRRRPREEVRAL 30.600671 492.801348865032 357814.5 5641.0 ENSG00000171316|ENST00000423902|CHD7 0.7529134551684061 4.0 False 15.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5645 30.604 146.0 514680.0 25 0 60243.0 + 30470 REAGFQVKAY 10 90 584.8090527337364 1167.6035525342727 2 584.8095580935478 MULTI CID FTMS 0 0 0 5641 339861.84375 0.9854873308416104 -2 0.063058853149414 4 Unmodified _REAGFQVKAY_ chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-13|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-6|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 37.07464296494664 0.1884581770199685 1 [AG]{[RE]|[WV]}{M(Oxidation (M))|F}QVKAY 10 4 + 61.69 0.0 0.0 5.2835 5.2835 84.212 0.0 0.0 0.0 4.672001251321404 36.751774496539525 4.672001251321404 9.164539485499247 0 1.75 1.0457574905606752 0.4247425010840047 0.2887254899964357 [AG]{[RE]|[WV]}{M(Oxidation (M))|F}QVKAY;[AG]{[RE]|[WV]}{M(Oxidation (M))|F}[AG]VKAY 5.2835;4.4986 -;- 113 1 2.15 59513.8 1.0 2267 3376 5641 DOHH2_400M_050219_1,5645 DOHH2_400M_050219_1,5645,REAGFQVKAY False True REAGFQVKAY 30.603596 584.809558093548 2093998.375 5641.0 nc|ENSG00000132185|Q7L513-3|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;nc|ENSG00000132185|Q7L513-6|FCRLA;;nc|ENSG00000132185|Q7L513-13|FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-8|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA 6.586668332417806 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5646 30.608 221.0 476050.0 25 0 72702.0 + 8531 ETEREYFNRY 10 102 469.5495643752755 1405.6268637260266 3 469.5495788455009 MULTI CID FTMS 0 0 0 5641 194833.078125 0.6710250886721855 -1 0.0070629119873046 5 Unmodified _ETEREYFNRY_ ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6 20.871137199558856 0.4973446006067743 1 ET{[RE]|[WV]}EY{M(Oxidation (M))|F}NRY 10 0 + 55.007 0.0 0.0 3.9133 3.9133 71.487 0.0 0.0 0.0 24.35464087144376 1.3460658129793046 1.3460658129793046 1.3460658129793046 0 0.2134679910804404 0.8239087409443188 0.4247425010840047 0.4802046884880938 + + ET{[RE]|[WV]}EY{M(Oxidation (M))|F}NRY;ET{[RE]|[WV]}EY{M(Oxidation (M))|F}YNR;ET{[RE]|[WV]}EY{M(Oxidation (M))|F}NYR;ET{[RE]|[WV]}TYEM[KG]Y;ET{[RE]|[WV]}EYY{M(Oxidation (M))|F}NR;ET{[RE]|[WV]}EY{M(Oxidation (M))|F}GGRY;ET{[RE]|[WV]}EYTM[KG]Y;ET{[RE]|[WV]}EY{M(Oxidation (M))|F}YGGR;ET{[RE]|[WV]}EY{M(Oxidation (M))|F}GGYR;ET{[RE]|[WV]}EYY{M(Oxidation (M))|F}GGR 3.9133;3.8176;3.7812;3.7319;3.392;3.2613;3.1902;3.1656;3.1293;2.74 +;-;-;-;-;-;-;-;-;- + 424 + 1 2.15 85476.8 1.0 2268 3376 5641 DOHH2_400M_050219_1,5646 DOHH2_400M_050219_1,5646,ETEREYFNRY False True ETEREYFNRY 30.607764 469.549578845501 1450815.75 5641.0 nc|ENSG00000122257|Q7Z6E9-2|RBBP6;;ENSG00000122257|ENST00000319715|RBBP6 7.1780470212300616 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5647 30.613 271.0 288710.0 25 0 24145.0 + 25525 NEQDGVTYSY 10 121 588.2468224341983 1174.4790919351965 2 588.2463867068291 MULTI CID FTMS 0 0 0 5641 161366.390625 0.3019694734912914 -2 0.063058853149414 6 Unmodified _NEQDGVTYSY_ ENSG00000168528|ENST00000373709|SERINC2;ENST00000491976.1_1_1:31888748-31907043:+|nuORF;nc|ENSG00000168528|Q96SA4-2|SERINC2;nc|ENSG00000168528|Q96SA4-3|SERINC2;nc|ENSG00000168528|Q96SA4-4|SERINC2 61.60191391372663 0.0323840705564037 1 [YT]SYQT 6 8 33.026 0.0 0.0 2.8119 0.0 0.0 0.0 428.14685251552777 428.14685251552777 6.321180836201172 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.7742275032520141 0.3054621874040891 [YT]SYQT 2.8119 - 900 1 2.15 61537.4 1.0 2269 3376 5641 DOHH2_400M_050219_1,5647 DOHH2_400M_050219_1,5647,NEQDGVTYSY True True NEQDGVTYSY 30.612781 588.246386706829 3005244.75 5641.0 nc|ENSG00000168528|Q96SA4-2|SERINC2;;ENSG00000168528|ENST00000373709|SERINC2;;ENST00000491976.1_1_1:31888748-31907043:+|nuORF;;nc|ENSG00000168528|Q96SA4-3|SERINC2;;nc|ENSG00000168528|Q96SA4-4|SERINC2 6.352755228678386 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5648 30.617 214.0 260380.0 25 0 27121.0 + 35273 SSKGSLGGGF 10 87 448.72706885613593 895.4395847790719 2 448.7271911501884 MULTI CID FTMS 0 0 0 5641 136880.765625 0.8637079015591933 1 -0.0522918701171875 7 Unmodified _SSKGSLGGGF_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 10.073929032068715 0.6785112666868882 1 {[CA]|SS}KKENG{M(Oxidation (M))|F} 8 5 {[CA]|SS}KKE + + 26.555 -17.068 -3.0517 2.9655 2.9655 50.366 0.0 0.0 0.0 0.0 13.05970632012567 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[CA]|SS}KKENG{M(Oxidation (M))|F} 2.9655 - 93 + 1 2.15 51408.0 1.0 2270 3376 5641 DOHH2_400M_050219_1,5648 DOHH2_400M_050219_1,5648,SSKGSLGGGF False True False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 5649 30.631 800.0 176610.0 25 0 12695.0 1154 AGWFWCERLYC 11 128 717.3087018027306 1432.6028506722612 2 718.3151733279228 MULTI CID FTMS 0 0 0 5641 139125.671875 0.4332629397994174 -8 0.3484687805175781 8 Unmodified _AGWFWCERLYC_ ENST00000448841.5_1_10:104573746-104573887:+|nuORF 8.155526934196011 0.8366696279279818 1 YYANQQAEH{M(Oxidation (M))|F}Y 11 10 + 89.174 0.0 0.0 6.2246 6.2246 87.498 0.0 0.0 0.0 7.367585652254178 13.222192947339195 7.367585652254178 9.128498242810991 0 0.0 0.0 0.9947026752325154 0.8494850021680094 YYANQQAEH{M(Oxidation (M))|F}Y;YYAN[AG]QAEH{M(Oxidation (M))|F}Y;YYAGGQQAEH{M(Oxidation (M))|F}Y;YYANQ[AG]AEH{M(Oxidation (M))|F}Y;YYANQQEAH{M(Oxidation (M))|F}Y;YYANQQAEHY{M(Oxidation (M))|F};YYAGG[AG]QAEH{M(Oxidation (M))|F}Y;YYAN[AG][AG]AEH{M(Oxidation (M))|F}Y;YYAGGQ[AG]AEH{M(Oxidation (M))|F}Y;YYAGGQQEAH{M(Oxidation (M))|F}Y 6.2246;5.5874;5.5874;5.5874;5.5266;5.3017;4.9524;4.9524;4.9524;4.8894 -;-;-;-;-;-;-;-;-;- 6630 + 1 2.15 100932.7 0.699999988079071 2271 3376 5641 DOHH2_400M_050219_1,5649 DOHH2_400M_050219_1,5649,AGWFWCERLYC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5650 30.638 388.0 244550.0 25 0 17956.0 + 812 AESVVPARM 9 114 480.2524753650862 958.4903977969724 2 480.2524291872978 MULTI CID FTMS 0 0 0 5641 121432.140625 0.8449255156371391 -2 0.063058853149414 9 Unmodified _AESVVPARM_ ENSG00000167508|ENST00000301012|MVD;ENST00000565149.5_1_16:88718935-88722722:-|nuORF 43.85829265575387 0.0542763391141878 1 [VS]RMVVS 7 7 48.012 0.0 0.0 5.0092 0.0 0.0 0.0 197.054664628276 197.054664628276 35.77655213715317 0.0 0.0 0.0 0 1.274227503252014 1.0969100130080565 0.2742275032520141 0.3054621874040891 [VS]RMVVS 5.0092 - 473 1 2.15 77282.7 1.0 2272 3376 5641 DOHH2_400M_050219_1,5650 DOHH2_400M_050219_1,5650,AESVVPARM True True AESVVPARM 30.637602 480.252429187298 698268.375 5641.0 ENST00000565149.5_1_16:88718935-88722722:-|nuORF;;ENSG00000167508|ENST00000301012|MVD 4.056610186894734 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5651 30.644 354.0 252800.0 25 0 14157.0 44129 YLDLCQLPL 9 112 359.8582567641284 1076.5529408925852 3 359.8584777712822 MULTI CID FTMS 0 0 0 5641 112677.4296875 1.0 0 0.0 10 Unmodified _YLDLCQLPL_ ENST00000519481.5_1_8:128903106-129001428:+|nuORF;ENST00000521951.1_1_8:128903100-128951828:+|nuORF 9.38312468134398 0.5871240394367778 1 W{I|L} 2 8 20.969 0.0 0.0 1.9478 0.0 0.0 0.0 774.3694356213887 774.3694356213887 9.186363512511502 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W{I|L} 1.9478 - 40 + 1 2.15 76180.0 1.0 2273 3376 5641 DOHH2_400M_050219_1,5651 DOHH2_400M_050219_1,5651,YLDLCQLPL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5653 30.657 601.0 184850.0 25 0 17290.0 -1 AELGMCHVL 9 154 523.2455553846768 1044.4765578361537 2 523.2487060427666 MULTI CID FTMS 0 0 0 5652 119867.1875 0.1216560098655626 10 -0.6102104187011719 1 Carbamidomethyl (C),Oxidation (M) _AELGM(Oxidation (M))C(Carbamidomethyl (C))HVL_ nc|ENSG00000168903|Q6UXE8-2|BTNL3 12.531546534597751 0.4974689918368763 1 {I|L}GGG{[DS]|[MA]|[CV]|TT} 6 -1 21.502 0.0 0.0 2.0586 0.0 0.0 540.2418138092329 0.0 540.2418138092329 0.0 -4.643651917185068 -4.643651917185068 0.0 0 0.0 0.0 0.7856668758921829 0.0 {I|L}GGG{[DS]|[MA]|[CV]|TT} 2.0586 - 466 + 1 2.15 89322.0 1.0 2274 3377 5652 DOHH2_400M_050219_1,5653 DOHH2_400M_050219_1,5653,AELGMCHVL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 5654 30.663 324.0 313170.0 25 0 37420.0 + 42163 VSDDGTLHM 9 132 487.7159190985662 973.4172852639324 2 487.7167846560478 MULTI CID FTMS 0 0 0 5652 139358.046875 0.4530266931214969 -2 0.0593547821044921 2 Unmodified _VSDDGTLHM_ ENSG00000141101|ENST00000268802|NOB1 32.30548876998284 0.1201446275138228 1 VSDDGT{I|L}HM 9 0 + 71.421 0.0 0.0 7.3372 7.3372 94.548 0.0 0.0 0.0 38.8856082184537 10.908458057352178 10.908458057352178 16.361791744765625 0 0.4247425010840047 2.0 0.0 0.0 + + VSDDGT{I|L}HM;VSDDGT[HM]{I|L};VSDDG[YR]Y;VSDDG[WQ][PA];VSDD[WQ][QP];VSDD[WQ]G[PA];VSDDG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QP];VSDDG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[PA];VSDD[WQ]A[PG];VSDDG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[PG] 7.3372;5.6563;5.6401;4.8112;4.6108;4.5307;4.3486;4.274;4.0989;3.8422 +;-;-;-;-;-;-;-;-;- + 684 + 1 2.15 78855.1 1.0 2275 3377 5652 DOHH2_400M_050219_1,5654 DOHH2_400M_050219_1,5654,VSDDGTLHM True True VSDDGTLHM 30.662837 487.716784656048 1868897.125 5652.0 ENSG00000141101|ENST00000268802|NOB1 7.135159015655518 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5655 30.667 250.0 313910.0 25 0 76575.0 -1 0 94 459.2800905421363 458.2728140755363 1 459.2801696658134 MULTI CID FTMS 0 0 0 5652 298619.09375 0.0033893282094341 26 -1.7705097198486328 3 1 M 1 -1 10.969 0.0 0.0 2.3936 0.0 0.0 309.221176357566 0.0 309.221176357566 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 M 2.3936 - 14 + 1 2.15 65858.3 1.0 2276 3377 5652 DOHH2_400M_050219_1,5655 DOHH2_400M_050219_1,5655, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5656 30.672 255.0 330150.0 25 0 20265.0 + 5278 DLAAREHVL 9 110 512.2821451382542 1022.5497373433084 2 512.2827636599541 MULTI CID FTMS 0 0 0 5652 141363.484375 0.7033432906600017 -1 0.0522918701171875 4 Unmodified _DLAAREHVL_ ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF 29.84058131909904 0.1515068451768857 1 {NN|[MP]|[D{I|L}]|[EV]}A[HQ]{I|L}DV{I|L} 9 4 + 62.132 0.0 0.0 6.0761 6.0761 92.777 0.0 0.0 0.0 25.6424927368726 49.91312192373542 25.6424927368726 31.9363304296294 0 1.4049471895720984 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}A[HQ]{I|L}DV{I|L};{[CP]|[EA]}V[HQ]{I|L}DV{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[WK]{I|L}DV{I|L} 6.0761;2.9529;2.0155 -;-;- 144 1 2.15 69021.7 1.0 2277 3377 5652 DOHH2_400M_050219_1,5656 DOHH2_400M_050219_1,5656,DLAAREHVL False True DLAAREHVL 30.672224 512.282763659954 990039.9375 5652.0 ENST00000477668.5_1_3:127323572-127337961:+|nuORF;;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2 5.63757340113322 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5657 30.686 800.0 129440.0 25 0 14111.0 + 1055 AGGGAIEM 8 109 705.3240397982269 704.3167633316268 1 705.3250610232353 MULTI CID FTMS 0 0 0 5652 105016.09375 0.7902296029434364 -1 0.0522918701171875 5 Unmodified _AGGGAIEM_ ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 49.66892048692302 0.1408045912742846 1 {[QN]|[E{I|L}]|[KN]}A{I|L}EM 6 4 + 61.52 0.0 0.0 8.7348 8.7348 87.943 0.0 0.0 0.0 18.922042885466084 16.197887582883936 16.197887582883936 3.9928876664371415 0 0.7856668758921829 1.3979400086720375 0.9049471895720984 0.0 {[QN]|[E{I|L}]|[KN]}A{I|L}EM;{[QN]|[E{I|L}]|[KN]}AE{I|L}M;{[QN]|[E{I|L}]|[KN]}{I|L}AEM;{[QG]|[NA]}GA{I|L}EM;{[QG]|[NA]}GAE{I|L}M;{[QG]|[NA]}Q{I|L}EM;{[QN]|[E{I|L}]|[KN]}{I|L}EAM;{[QG]|[NA]}QE{I|L}M;{[QG]|[NA]}G{I|L}AEM;QNA{I|L}EM 8.7348;8.1678;7.0913;6.0482;5.8706;5.8282;5.7476;5.6507;4.7597;4.3791 -;-;-;-;-;-;-;-;-;- 422 1 2.15 81618.2 0.6100000143051147 2278 3377 5652 DOHH2_400M_050219_1,5657 DOHH2_400M_050219_1,5657,AGGGAIEM False True AGGGAIEM 30.686058 705.325061023235 598866.375 5652.0 nc|ENSG00000135624|Q99832-2|CCT7;;nc|ENSG00000135624|Q99832-4|CCT7;;ENSG00000135624|ENST00000258091|CCT7;;nc|ENSG00000135624|Q99832-3|CCT7 4.138216098149617 1.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5659 30.691 100.0 565590.0 25 0 46168.0 + 7123 EEMPATKGGF 10 88 533.7469831797385 1065.479413426277 2 533.7474853396416 MULTI CID FTMS 0 0 0 5658 463814.21875 0.2823196392774135 4 -0.2486438751220703 1 Unmodified _EEMPATKGGF_ ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153 23.78978130925829 0.4341852049148378 1 EEMPAT 6 4 54.654 0.0 0.0 5.1295 0.0 0.0 0.0 404.1947420709594 404.1947420709594 33.39902832107995 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.4247425010840047 0.0 + EEMPAT 5.1295 + + 91 + 1 2.15 50710.1 1.0 2279 3378 5658 DOHH2_400M_050219_1,5659 DOHH2_400M_050219_1,5659,EEMPATKGGF False True EEMPATKGGF 30.691489 533.747485339642 17393602.0 5658.0 nc|ENSG00000124789|P49790-2|NUP153;;ENSG00000124789|ENST00000262077|NUP153;;nc|ENSG00000124789|P49790-3|NUP153 8.402208010355631 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5660 30.703 674.0 200010.0 25 0 22122.0 + -1 ICFNTDEAAFY 11 129 675.7892704141832 1349.5639878951663 2 675.7893554568291 MULTI CID FTMS 0 0 0 5658 258837.484375 0.2370237989902536 4 -0.2486438751220703 2 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FNTDEAAFY_ REV__ENSG00000163746|ENST00000696113|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7-3|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7|PLSCR2 26.268140514670165 0.4754186812857754 1 {[QN]|[E{I|L}]|[KN]}[HS]NQQGGA{M(Oxidation (M))|F}Y 12 -1 + 94.755 0.0 0.0 7.0212 7.0212 82.507 0.0 0.0 0.0 5.148249686823263 10.969843251417132 5.148249686823263 1.840601887269571 0 0.9247425010840048 0.0 2.0565533887547014 2.617130270739436 {[QN]|[E{I|L}]|[KN]}[HS]NQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y;[HD][DV]NQQGGA{M(Oxidation (M))|F}Y;[HD][DV]NQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]N[AG]QGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQ[AG]GGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]GGQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]GGQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]N[AG]QNA{M(Oxidation (M))|F}Y 7.0212;6.8848;6.6397;6.5033;6.347;6.347;6.347;6.2084;6.2084;6.2084 -;-;-;-;-;-;-;-;-;- 5435 1 2.15 102287.7 1.0 2280 3378 5658 DOHH2_400M_050219_1,5660 DOHH2_400M_050219_1,5660,ICFNTDEAAFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5661 30.707 223.0 304190.0 25 0 26766.0 + 41094 VNKIKEIAV 9 106 507.3213559886028 1012.6281590440057 2 507.3215820193291 MULTI CID FTMS 0 0 0 5658 278690.875 0.5250788962996458 -2 0.0943183898925781 3 Unmodified _VNKIKEIAV_ ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 53.40400417844725 0.0329064971918313 1 VNK{I|L} 4 5 50.649 0.0 0.0 5.0017 0.0 0.0 0.0 555.3159273736936 555.3159273736936 21.95453676327028 0.0 0.0 0.0 0 1.2134679910804405 0.958607314841775 0.0 0.0 + VNK{I|L} 5.0017 + + 794 + 1 2.15 56199.6 1.0 2281 3378 5658 DOHH2_400M_050219_1,5661 DOHH2_400M_050219_1,5661,VNKIKEIAV True True VNKIKEIAV 30.707422 507.321582019329 5870653.5 5658.0 nc|ENSG00000135624|Q99832-3|CCT7;;nc|ENSG00000135624|Q99832-4|CCT7;;ENSG00000135624|ENST00000258091|CCT7;;ENST00000461290.5_1_2:73461506-73471178:+|nuORF 5.102926095326741 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5662 30.711 166.0 539630.0 25 0 94051.0 + 10445 FTEPNRHFY 9 94 404.192222872192 0 404.1924011111259 PEAK CID FTMS 0 0 0 5658 190704.90625 0.7045287644199038 -2 0.0943183898925781 4 Unmodified _FTEPNRHFY_ ENSG00000165355|ENST00000298097|FBXO33 18.13498045792455 0.2189554373504223 1 {M(Oxidation (M))|F}TE 3 6 15.005 0.0 0.0 1.8608 0.0 0.0 155.0432728111686 271.14545618228755 426.18872899345615 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + {M(Oxidation (M))|F}TE 1.8608 + + 36 + 1 2.15 72276.0 1.0 2282 3378 5658 DOHH2_400M_050219_1,5662 DOHH2_400M_050219_1,5662,FTEPNRHFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5663 30.716 311.0 292990.0 25 0 61662.0 + 31700 RRNPGVVIY 9 109 537.313979586129 1072.613406239058 2 537.3143188357353 MULTI CID FTMS 0 0 0 5658 161946.203125 0.5527128187286838 -2 0.0943183898925781 5 Unmodified _RRNPGVVIY_ ENSG00000055950|ENST00000318364|MRPL43;nc|ENSG00000055950|Q8N983-2|MRPL43;nc|ENSG00000055950|Q8N983-3|MRPL43;nc|ENSG00000055950|Q8N983-6|MRPL43;nc|ENSG00000055950|Q8N983-7|MRPL43;nc|ENSG00000055950|Q8N983|MRPL43 23.1484247019978 0.2366544122328345 1 {I|L}Y 2 7 28.271 0.0 0.0 2.6357 0.0 0.0 778.4566517523931 0.0 778.4566517523931 0.0 16.48841039739244 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 + {I|L}Y 2.6357 + + 86 1 2.15 71941.1 1.0 2283 3378 5658 DOHH2_400M_050219_1,5663 DOHH2_400M_050219_1,5663,RRNPGVVIY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5664 30.719 156.0 326920.0 25 0 44585.0 -1 TKNERQVMK 9 85 575.3082694743387 1148.6019860154772 2 575.3081542849541 MULTI CID FTMS 0 0 0 -1 0 6 Oxidation (M) _TKNERQVM(Oxidation (M))K_ ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A 8.155526934196011 0.6299788542272896 1 [KT]T[DV][{I|L}P]T{M(Oxidation (M))|F}Q 10 -1 + 21.157 0.0 0.0 1.842 1.842 80.176 0.0 0.0 0.0 0.4575749056067479 8.938937347570075 0.4575749056067479 21.15742484373364 0 0.5994850021680094 0.0 0.4247425010840047 0.0 [KT]T[DV][{I|L}P]T{M(Oxidation (M))|F}Q 1.842 - 45 1 2.15 43595.3 1.0 2284 3378 5658 DOHH2_400M_050219_1,5664 DOHH2_400M_050219_1,5664,TKNERQVMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5665 30.733 800.0 232940.0 25 0 17837.0 + -1 CRNIMCLEKMY 11 125 796.3427710421954 1590.6709891511907 2 796.3438598513603 MULTI CID FTMS 0 0 0 5658 143585.421875 0.3326253925677838 -2 0.0943183898925781 7 Acetyl (Protein N-term),2 Carbamidomethyl (C),2 Oxidation (M) _(Acetyl (Protein N-term))C(Carbamidomethyl (C))RNIM(Oxidation (M))C(Carbamidomethyl (C))LEKM(Oxidation (M))Y_ REV__ENST00000370766.7_1_X:134425468-134426389:-|nuORF 5.296884461304476 0.8501568894076437 1 {[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}YQ 14 -1 + 122.16 0.0 0.0 7.6798 7.6798 86.46 0.0 0.0 0.0 3.236192784677826 85.34868968807169 3.236192784677826 3.893331818128857 0 1.2059771852360797 0.7695510786217261 1.316901560044258 2.2104093769761874 {[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}GAG[HD]AQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}GQ[HD]AQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}QG[HD]AQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}AGG[HD]AQQNA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HN]EA[AG]QNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HN]EAQQGGA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HN]EAQ[AG]NA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}AN[HD]AQQNA{M(Oxidation (M))|F}YQ 7.6798;7.4351;7.353;7.142;7.1199;7.1168;7.1109;7.1109;7.1109;7.0378 -;-;-;-;-;-;-;-;-;- 20856 1 2.15 127793.9 0.6600000262260437 2285 3378 5658 DOHH2_400M_050219_1,5665 DOHH2_400M_050219_1,5665,CRNIMCLEKMY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5666 30.747 800.0 94786.0 25 0 4303.7 + + -1 ASTDYSTYSQAAA 13 126 689.2945206823384 0 689.2942382693291 PEAK CID FTMS 0 0 0 5658 120112.234375 1.0 0 0.0 8 Oxidation (M) _ENKM(Oxidation (M))THNEEVM_ nc|ENSG00000182944|Q01844-6|EWSR1;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-2|EWSR1;ENSG00000182944|ENST00000397938|EWSR1 5.731851221503515 0.47618401536486 1 YDT 3 -1 16.428 0.0 0.0 1.1934 0.0 0.0 815.3667990777643 179.04705225162346 994.4138513293876 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9876954943324544 0.0 YDT 1.1934 - 228 + 1 2.15 57769.4 0.6700000166893005 2286 3378 5658 DOHH2_400M_050219_1,5666 DOHH2_400M_050219_1,5666,ENKMTHNEEVM False False ASTDYSTYSQAAA 30.747147 689.294238269329 817169.0 5658.0 nc|ENSG00000182944|Q01844-6|EWSR1;;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;;nc|ENSG00000182944|Q01844-5|EWSR1;;nc|ENSG00000182944|Q01844-4|EWSR1;;nc|ENSG00000182944|Q01844-3|EWSR1;;nc|ENSG00000182944|Q01844-2|EWSR1;;ENSG00000182944|ENST00000397938|EWSR1 6.860530217488607 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5667 30.761 800.0 192350.0 25 0 12730.0 + 275 ADIDTRSEF 9 166 527.2446526547772 1052.4747523763542 2 526.7418090701103 MULTI CID FTMS 0 0 0 5658 109178.6953125 0.7379122538056817 -3 0.1013813018798828 9 Unmodified _ADIDTRSEF_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 36.506200033944 0.094635877243972 1 AD{I|L}DT{M(Oxidation (M))|F}PQ{M(Oxidation (M))|F} 9 3 + 50.836 0.0 0.0 4.8302 4.8302 79.966 0.0 0.0 0.0 16.122111372561122 8.447982388702258 8.447982388702258 6.020599913279625 0 0.0 1.154901959985743 0.3494850021680094 0.2742275032520141 AD{I|L}DT{M(Oxidation (M))|F}PQ{M(Oxidation (M))|F};AD{I|L}ES{M(Oxidation (M))|F}PQ{M(Oxidation (M))|F};AD{I|L}D{I|L}[MT]Q{M(Oxidation (M))|F};AD{I|L}DT[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F};AD{I|L}D{I|L}[KC]E{M(Oxidation (M))|F};AD{I|L}D{I|L}W{[SA]|[TG]}Y;AD{I|L}DT{M(Oxidation (M))|F}P[AG]{M(Oxidation (M))|F};AD{I|L}ES[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F};AD{I|L}DT{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P;AD{I|L}ES{M(Oxidation (M))|F}P[AG]{M(Oxidation (M))|F} 4.8302;4.2581;4.2563;4.2181;4.1249;3.877;3.6947;3.6461;3.1928;3.1226 -;-;-;-;-;-;-;-;-;- 1561 + 1 2.15 119707.0 0.5600000023841858 2287 3378 5658 DOHH2_400M_050219_1,5667 DOHH2_400M_050219_1,5667,ADIDTRSEF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5668 30.771 457.0 186240.0 25 0 14686.0 + 26433 NTDSPLRY 8 130 483.2379802313025 964.461407529405 2 483.2380248904228 MULTI CID FTMS 0 0 0 5658 94202.2890625 0.0026430215618884 18 -1.2179698944091797 10 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 34.40172386719151 0.3279500639400574 1 {[QS]|[NT]}DSP{I|L}RY 8 0 + 58.867 0.0 0.0 6.1036 6.1036 92.555 0.0 0.0 0.0 49.18906206499085 14.024174299985 14.024174299985 25.74031267727718 0 0.805462187404089 1.5228787452803376 0.0 0.0 + + {[QS]|[NT]}DSP{I|L}RY;{[QS]|[NT]}DSP[YR]{I|L};{[QS]|[NT]}D{[VA]|[{I|L}G]}[W{M(Oxidation (M))|F}]{I|L};{[QS]|[NT]}Y[PS][RD]{I|L} 6.1036;3.4347;1.8848;1.0734 +;-;-;- + 188 + 1 2.15 69248.4 1.0 2288 3378 5658 DOHH2_400M_050219_1,5668 DOHH2_400M_050219_1,5668,NTDSPLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5669 30.774 176.0 502950.0 25 0 30001.0 + 31701 RRNPGVVIY 9 110 358.5453235032044 1072.614141109813 3 358.5449401736259 MULTI CID FTMS 0 0 0 5658 84593.109375 0.4126105374395836 -2 0.0943183898925781 11 Unmodified _RRNPGVVIY_ ENSG00000055950|ENST00000318364|MRPL43;nc|ENSG00000055950|Q8N983-2|MRPL43;nc|ENSG00000055950|Q8N983-3|MRPL43;nc|ENSG00000055950|Q8N983-6|MRPL43;nc|ENSG00000055950|Q8N983-7|MRPL43;nc|ENSG00000055950|Q8N983|MRPL43 11.640296217721598 0.521594087909532 1 V{I|L}Y 3 6 24.425 0.0 0.0 2.2771 0.0 0.0 679.3907966400567 0.0 679.3907966400567 0.0 13.455612550363796 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + V{I|L}Y 2.2771 + + 23 1 2.15 73994.1 1.0 2289 3378 5658 DOHH2_400M_050219_1,5669 DOHH2_400M_050219_1,5669,RRNPGVVIY False True RRNPGVVIY 30.773955 358.544940173626 1095229.875 5658.0 nc|ENSG00000055950|Q8N983|MRPL43;;nc|ENSG00000055950|Q8N983-6|MRPL43;;ENSG00000055950|ENST00000318364|MRPL43;;nc|ENSG00000055950|Q8N983-7|MRPL43;;nc|ENSG00000055950|Q8N983-3|MRPL43;;nc|ENSG00000055950|Q8N983-2|MRPL43 1.674265682697296 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5670 30.776 102.0 594590.0 25 0 40418.0 + 35376 STEERTFQY 9 86 580.7636625019015 1159.512772070603 2 580.7651244997978 MULTI CID FTMS 0 0 0 5658 154151.375 0.5259576239398148 -1 0.0420265197753906 12 Unmodified _STEERTFQY_ ENSG00000005469|ENST00000331536|CROT;nc|ENSG00000005469|Q9UKG9-2|CROT;nc|ENSG00000005469|Q9UKG9-3|CROT 21.53697664764585 0.2571576504437394 1 {[MG]|[TS]}E[YV]{M(Oxidation (M))|F}{[CA]|SS}{I|L}Q 10 7 + 28.923 0.0 0.0 2.4944 2.4944 69.721 0.0 0.0 0.0 5.5102999566398125 8.222032945537432 5.5102999566398125 2.614393726401687 0 0.3494850021680094 0.0 0.0 0.7803695511246984 {[MG]|[TS]}E[YV]{M(Oxidation (M))|F}{[CA]|SS}{I|L}Q;{[MG]|[TS]}E[YV]{M(Oxidation (M))|F}{I|L}{[CA]|SS}Q;{[MG]|[TS]}E[YV]{M(Oxidation (M))|F}{[WT]|[RM]}Q;{[MG]|[TS]}E[YV]{M(Oxidation (M))|F}{I|L}C(Carbamidomethyl (C))AA;{[MG]|[TS]}E[YV]{M(Oxidation (M))|F}{I|L}[CG]AA;{[MG]|[TS]}E[YV]{M(Oxidation (M))|F}{[CA]|SS}VAA;{[MG]|[TS]}E[YV]{M(Oxidation (M))|F}AA{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MG]|[TS]}E[YV]{M(Oxidation (M))|F}AAMAA 2.4944;2.2689;1.7056;1.4099;0.61954;0.61954;0.20429;0.10031 -;-;-;-;-;-;-;- 210 + 1 2.15 49708.3 1.0 2290 3378 5658 DOHH2_400M_050219_1,5670 DOHH2_400M_050219_1,5670,STEERTFQY False True STEERTFQY 30.776165 580.765124499798 1495831.5 5658.0 ENSG00000005469|ENST00000331536|CROT;;nc|ENSG00000005469|Q9UKG9-2|CROT;;nc|ENSG00000005469|Q9UKG9-3|CROT 4.817856152852376 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5671 30.782 334.0 241830.0 25 0 13817.0 + 1974 ANFPKHVI 8 107 463.2660921344502 924.5176313357003 2 463.2667724490166 MULTI CID FTMS 0 0 0 5658 130504.09375 1.0 0 0.0 13 Unmodified _ANFPKHVI_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 26.34127834903884 0.4900704351052977 1 MVP 3 7 23.188 0.0 0.0 2.5081 0.0 0.0 0.0 594.3369360288448 594.3369360288448 9.107281392838829 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MVP 2.5081 - 250 + 1 2.15 67266.3 1.0 2291 3378 5658 DOHH2_400M_050219_1,5671 DOHH2_400M_050219_1,5671,ANFPKHVI False True ANFPKHVI 30.782212 463.266772449017 918378.1875 5658.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 3.9326189359029136 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5673 30.794 455.0 157120.0 25 0 17032.0 + 9479 FLDESRSTQY 10 97 623.2909170671036 1244.567281201007 2 623.2911865115166 MULTI CID FTMS 0 0 0 5672 97561.609375 0.012279410297845 9 -0.5258846282958984 1 Unmodified _FLDESRSTQY_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 49.52724829834842 0.0829255630816734 1 STSED{I|L}E 7 9 48.281 0.0 0.0 3.8793 0.0 0.0 465.2149830548844 0.0 465.2149830548844 0.0 28.54888853538717 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 STSED{I|L}E 3.8793 - 388 1 2.158 57629.6 1.0 2292 3379 5672 DOHH2_400M_050219_1,5673 DOHH2_400M_050219_1,5673,FLDESRSTQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5674 30.796 72.0 1070100.0 25 0 75325.0 + 786 AESLIAKKI 9 96 486.80822089165264 971.6018888501052 2 486.8083373904228 MULTI CID FTMS 0 0 0 5672 721607.5625 0.4763713522011644 -2 0.1383056640625 2 Unmodified _AESLIAKKI_ ENSG00000166226|ENST00000299300|CCT2;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2 65.23502041540118 0.0231836506122253 1 {[CP]|[EA]}S{I|L}{I|L}AKK{I|L} 9 0 + 56.111 0.0 0.0 5.7751 5.7751 92.456 0.0 0.0 0.0 25.23046501650093 11.706962271689749 11.706962271689749 56.11100950661936 0 1.1549471895720984 0.0 0.0 0.25 + + {[CP]|[EA]}S{I|L}{I|L}AKK{I|L} 5.7751 + + 401 + 1 2.158 64645.5 1.0 2293 3379 5672 DOHH2_400M_050219_1,5674 DOHH2_400M_050219_1,5674,AESLIAKKI True True AESLIAKKI 30.795874 486.808337390423 14620442.0 5672.0 nc|ENSG00000166226|P78371-2|CCT2;;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;;ENSG00000166226|ENST00000299300|CCT2;;ENST00000551620.5_1_12:69979244-69983508:+|nuORF 3.849625031153361 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5675 30.798 95.0 553960.0 25 0 79053.0 + 4911 DGKYSQVL 8 89 455.2375477703204 908.4605426074407 2 455.2369567751884 MULTI CID FTMS 0 0 0 5672 425351.5 0.2774489010851028 -2 0.1383056640625 3 Unmodified _DGKYSQVL_ ENSG00000231500|ENST00000439602|RPS18;ENST00000407538.2_1_6:141243712-141243922:-|nuORF;ENST00000445477.1_1_22:31955550-31955922:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 37.97399986684836 0.2681860861828418 1 [DG]KYSQV{I|L} 8 0 + 44.627 0.0 0.0 4.9123 4.9123 84.895 0.0 0.0 0.0 12.84318117920506 29.14197490877392 12.84318117920506 9.262137858390808 0 0.8182503180159344 0.8239087409443188 0.7302046884880937 0.4247425010840047 + + [DG]KYSQV{I|L};[DG]KYS[AG]V{I|L};[SG][VG]YSQV{I|L};[SG][VG]YS[AG]V{I|L} 4.9123;3.8928;2.9859;1.5047 +;-;-;- + 105 1 2.158 48002.9 1.0 2294 3379 5672 DOHH2_400M_050219_1,5675 DOHH2_400M_050219_1,5675,DGKYSQVL False True DGKYSQVL 30.797938 455.236956775188 7456420.5 5672.0 ENST00000496813.5_1_6:33239896-33244045:+|nuORF;;ENST00000445477.1_1_22:31955550-31955922:+|nuORF;;ENST00000407538.2_1_6:141243712-141243922:-|nuORF;;ENSG00000231500|ENST00000439602|RPS18 5.473535537719727 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5676 30.801 154.0 380950.0 25 0 29796.0 + 443 AEFEQGHQF 9 88 546.7410436359484 1091.4675343386966 2 546.7411376833916 MULTI CID FTMS 0 0 0 5672 279172.1875 0.9997450700486628 -1 0.0962791442871093 4 Unmodified _AEFEQGHQF_ ENSG00000234127|ENST00000454678|TRIM26 56.17704186161178 0.0281986971544335 1 {[CP]|[EA]}{M(Oxidation (M))|F}EQGHQ{M(Oxidation (M))|F} 9 0 + 61.029 0.0 0.0 5.5914 5.5914 86.514 0.0 0.0 0.0 37.67728766960431 16.82811800787377 16.82811800787377 9.208187539523747 0 0.8494850021680094 0.0 0.5 1.274227503252014 + + {[CP]|[EA]}{M(Oxidation (M))|F}EQGHQ{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}E[AG]GHQ{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}EQGH[AG]{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}EQ[DP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[CP]|[EA]}{M(Oxidation (M))|F}E[AG]GH[AG]{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}[WQ]HQ{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}E[AG][DP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[CP]|[EA]}{M(Oxidation (M))|F}E[NP]E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[CP]|[EA]}{M(Oxidation (M))|F}E[NP][MT][PG];{[CP]|[EA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[WY]{[ET]|[MV]} 5.5914;4.7478;4.0384;3.4253;2.7407;2.6641;2.5817;2.5337;2.403;2.2083 +;-;-;-;-;-;-;-;-;- + 453 + 1 2.158 52533.4 1.0 2295 3379 5672 DOHH2_400M_050219_1,5676 DOHH2_400M_050219_1,5676,AEFEQGHQF True True AEFEQGHQF 30.801005 546.741137683392 1751108.75 5672.0 ENSG00000234127|ENST00000454678|TRIM26 10.15397834777832 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5677 30.807 347.0 403720.0 25 0 46004.0 + 4288 DAREKISL 8 117 466.2641463883416 930.5137398434832 2 466.2649413943291 MULTI CID FTMS 0 0 0 5672 227382.640625 0.1207687542626983 -3 0.1905975341796875 5 Unmodified _DAREKISL_ ENSG00000100227|ENST00000252115|POLDIP3;ENST00000491021.1_1_22:42993722-42998991:-|nuORF;nc|ENSG00000100227|Q9BY77-2|POLDIP3 53.832793166522166 0.1212192986213991 1 D{I|L}S{I|L} 4 4 39.839 0.0 0.0 4.2814 0.0 0.0 484.2775135724625 0.0 484.2775135724625 0.0 21.16705324519962 0.0 0.0 0 0.9247425010840048 0.0 0.7059771852360797 0.0 D{I|L}S{I|L} 4.2814 - 220 1 2.158 110247.4 1.0 2296 3379 5672 DOHH2_400M_050219_1,5677 DOHH2_400M_050219_1,5677,DAREKISL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5678 30.821 800.0 140760.0 25 0 8317.8 -1 MEKRCRDDSFF 11 90 745.8313110387152 1489.6480691442302 2 745.8312866091728 MULTI CID FTMS 0 0 0 5672 134976.171875 1.0 0 0.0 6 Carbamidomethyl (C) _MEKRC(Carbamidomethyl (C))RDDSFF_ ENST00000415279.1_1_1:106434930-106435587:+|nuORF 7.608950283845883 0.8392484121837455 1 HDEAQQDA{M(Oxidation (M))|F}Y 10 -1 80.068 0.0 0.0 5.375 0.0 0.0 267.15965468574376 0.0 267.15965468574376 0.0 58.4731193101331 0.0 0.0 0 1.5994850021680094 0.0 0.0 1.2302046884880935 HDEAQQDA{M(Oxidation (M))|F}Y 5.375 - 1472 1 2.158 83517.0 0.6399999856948853 2297 3379 5672 DOHH2_400M_050219_1,5678 DOHH2_400M_050219_1,5678,MEKRCRDDSFF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5679 30.835 800.0 161330.0 25 0 41174.0 + 30566 REQAEEERYF 10 96 678.8133809991776 1355.6122090651552 2 678.8134643435478 MULTI CID FTMS 0 0 0 5672 104730.6328125 1.0 0 0.0 7 Unmodified _REQAEEERYF_ ENSG00000130770|ENST00000335514|ATP5IF1;nc|ENSG00000130770|Q9UII2-2|ATP5IF1;nc|ENSG00000130770|Q9UII2-3|ATP5IF1 21.2413784809298 0.4911323115084531 1 [VG][DG]REEER{M(Oxidation (M))|F}Y 11 7 + 61.644 0.0 0.0 4.5473 4.5473 71.99 0.0 0.0 0.0 6.064247967304127 0.2241553025821474 0.2241553025821474 0.2241553025821474 0 0.2215141619232908 1.5228787452803376 0.0 0.6989700043360187 [VG][DG]REEER{M(Oxidation (M))|F}Y;[VG][DG]REEERY{M(Oxidation (M))|F};[VG][DG][{I|L}A]TEER{M(Oxidation (M))|F}Y;[VG][DG][PS]TEER{M(Oxidation (M))|F}Y;[VG][DG][PS]TEERY{M(Oxidation (M))|F};[VG][DG][{I|L}A]TEERY{M(Oxidation (M))|F};[VG][DG][VG]EEER{M(Oxidation (M))|F}Y;[VG][DG][VG]EEERY{M(Oxidation (M))|F};[VG][DG][PS]ETER{M(Oxidation (M))|F}Y;[VG][DG][{I|L}A]ETER{M(Oxidation (M))|F}Y 4.5473;4.5308;3.8908;3.8908;3.8743;3.8743;3.874;3.8574;3.8155;3.8155 -;-;-;-;-;-;-;-;-;- 524 + 1 2.158 93137.8 0.5899999737739563 2298 3379 5672 DOHH2_400M_050219_1,5679 DOHH2_400M_050219_1,5679,REQAEEERYF False True REQAEEERYF 30.834953 678.813464343548 712947.5625 5672.0 ENSG00000130770|ENST00000335514|ATP5IF1;;nc|ENSG00000130770|Q9UII2-3|ATP5IF1;;nc|ENSG00000130770|Q9UII2-2|ATP5IF1 5.376153628031413 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5681 30.845 393.0 181470.0 25 0 22430.0 + 8935 FAMNDESVFY 10 90 611.7596868910786 1221.504820848957 2 611.7597534060478 MULTI CID FTMS 0 0 0 5680 145256.34375 0.0575637808062996 5 -0.2361125946044922 1 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 10.823927491677226 0.6659270209832991 1 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 56.815 0.0 0.0 4.6513 4.6513 81.008 0.0 0.0 0.0 7.269987279362624 39.825703356767264 7.269987279362624 7.95880017344075 0 0.8935078169319297 0.0 0.0 0.8494850021680094 [HD]EAQQNA{M(Oxidation (M))|F}Y;{[CT]|[{M(Oxidation (M))|F}G]}T{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;{[CT]|[{M(Oxidation (M))|F}G]}T{M(Oxidation (M))|F}[AG]QNA{M(Oxidation (M))|F}Y;{[CT]|[{M(Oxidation (M))|F}G]}T{M(Oxidation (M))|F}QQGGA{M(Oxidation (M))|F}Y;{[CT]|[{M(Oxidation (M))|F}G]}T{M(Oxidation (M))|F}Q[AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y 4.6513;3.9997;3.901;3.901;3.901;3.2494;3.2494;3.2494;3.1537;3.1537 -;-;-;-;-;-;-;-;-;- 463 1 2.158 56187.9 1.0 2299 3380 5680 DOHH2_400M_050219_1,5681 DOHH2_400M_050219_1,5681,FAMNDESVFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5682 30.848 162.0 606830.0 25 0 78267.0 + 13879 HVPEHAVVL 9 92 500.7823168311523 999.5500807291046 2 500.7827941775322 MULTI CID FTMS 0 0 0 5680 335004.6875 0.2523095651947967 -5 0.2504005432128906 2 Unmodified _HVPEHAVVL_ ENSG00000169710|ENST00000306749|FASN 32.30548876998284 0.1201446275138228 1 [HV][EP]HAVV{I|L} 9 0 + 60.767 0.0 0.0 6.0794 6.0794 81.42 0.0 0.0 0.0 16.13885281793209 40.04100322985387 16.13885281793209 3.0102999566398125 0 0.9674165578762484 2.0 0.0 0.0 + + [HV][EP]HAVV{I|L};[HV][EP]AHVV{I|L};[HV][EP]AVHV{I|L};[HV][{M(Oxidation (M))|F}V]{[MG]|[TS]}VV{I|L};[VG]{[YD]|[{M(Oxidation (M))|F}M]}VHVV{I|L};{[CT]|[{M(Oxidation (M))|F}G]}{[ET]|[MV]}VHVV{I|L};[VG]{[YD]|[{M(Oxidation (M))|F}M]}VVHV{I|L};[HV][{M(Oxidation (M))|F}V]{[WT]|[RM]}V{I|L};{[CT]|[{M(Oxidation (M))|F}G]}{[ET]|[MV]}VVHV{I|L};[HA][EP]VHVV{I|L} 6.0794;5.7782;5.3009;4.3285;4.2829;3.8738;3.8056;3.6804;3.3964;3.2203 +;-;-;-;-;-;-;-;-;- + 278 1 2.158 77846.3 1.0 2300 3380 5680 DOHH2_400M_050219_1,5682 DOHH2_400M_050219_1,5682,HVPEHAVVL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5683 30.851 187.0 282540.0 25 0 26603.0 + 25503 NEMEAPTTAY 10 92 563.7389956483213 1125.4634383634425 2 563.7401611208916 MULTI CID FTMS 0 0 0 5680 241786.90625 0.4266195199807323 -2 0.1490192413330078 3 Unmodified _NEMEAPTTAY_ ENSG00000180353|ENST00000314583|HCLS1 43.77239144664712 0.1177314611616471 1 {[QD]|[EN]|[WG]|[KD]|[RS]}MEA 5 5 27.72 0.0 0.0 2.463 0.0 0.0 0.0 548.2342830537967 548.2342830537967 4.532796692927263 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.6549471895720985 0.2614393726401688 + {[QD]|[EN]|[WG]|[KD]|[RS]}MEA 2.463 + + 72 1 2.158 48637.4 1.0 2301 3380 5680 DOHH2_400M_050219_1,5683 DOHH2_400M_050219_1,5683,NEMEAPTTAY True True NEMEAPTTAY 30.851351 563.740161120892 2761328.25 5680.0 ENSG00000180353|ENST00000314583|HCLS1 6.646607398986816 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5684 30.865 800.0 214920.0 25 0 21522.0 -1 QECLMLDFY 9 125 617.75975654691 1233.50496016062 2 617.7605468630791 MULTI CID FTMS 0 0 0 5680 128275.890625 0.801584821860102 -2 0.1490192413330078 4 Carbamidomethyl (C),Oxidation (M) _QEC(Carbamidomethyl (C))LM(Oxidation (M))LDFY_ ENST00000512186.1_1_5:80388771-80391986:+|nuORF 28.486842064014134 0.1687311288560894 1 EAQQNA{M(Oxidation (M))|F}Y 8 -1 84.736 0.0 0.0 6.8695 0.0 0.0 264.08653456855626 0.0 264.08653456855626 0.0 60.52771153650036 0.0 0.0 0 1.1989700043360187 0.0 1.2416440611282626 1.548455006504028 EAQQNA{M(Oxidation (M))|F}Y 6.8695 - 1253 1 2.158 128347.5 0.6600000262260437 2302 3380 5680 DOHH2_400M_050219_1,5684 DOHH2_400M_050219_1,5684,QECLMLDFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5685 30.879 800.0 175060.0 25 0 4445.9 -1 0 132 725.371060531112 2173.091352193536 3 725.7060424685478 MULTI CID FTMS 0 0 0 5680 107941.7109375 0.8067826778324085 -1 0.0527400970458984 5 1 KD[NP]DA{[QN]|[E{I|L}]|[KN]}[DV] 10 -1 36.444 0.0 0.0 1.6771 0.0 0.0 1058.608690330275 0.0 1058.608690330275 0.0 -0.7618392896024133 -0.7618392896024133 0.0 0 0.805462187404089 0.0 1.3494850021680094 0.0 KD[NP]DA{[QN]|[E{I|L}]|[KN]}[DV] 1.6771 - 1396 1 2.158 107172.3 0.6299999952316284 2303 3380 5680 DOHH2_400M_050219_1,5685 DOHH2_400M_050219_1,5685, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5686 30.88 58.0 1233000.0 25 0 315140.0 + 20954 LNKAKWFK 8 72 517.8105408645578 1033.6065287959154 2 517.8091308474541 MULTI CID FTMS 0 0 0 5680 664818.125 0.9519720430273044 -1 0.0527400970458984 6 Unmodified _LNKAKWFK_ REV__ENSG00000134962|ENST00000257408|KLB 5.230669730166228 0.792582437072536 1 {I|L}V 2 -1 19.464 0.0 0.0 1.8831 0.0 0.0 0.0 818.4269652817645 818.4269652817645 9.859856381998782 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 1.8831 - 13 + 1 2.158 60319.9 1.0 2304 3380 5680 DOHH2_400M_050219_1,5686 DOHH2_400M_050219_1,5686,LNKAKWFK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5687 30.888 445.0 423350.0 25 0 153990.0 -1 0 147 376.2339371831116 375.2266607165116 1 376.2328674197197 MULTI CID FTMS 0 0 0 5680 106730.03125 1.0 0 0.0 7 1 {I|L} 1 -1 12.474 0.0 0.0 3.3245 0.0 0.0 244.1315812260804 0.0 244.1315812260804 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.3245 - 21 + 1 2.158 148445.4 1.0 2305 3380 5680 DOHH2_400M_050219_1,5687 DOHH2_400M_050219_1,5687, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5689 30.893 42.0 1123200.0 25 0 98045.0 + 35256 SSFIGKVKS 9 84 476.7768521628333 951.5391513924668 2 476.7768127322197 MULTI CID FTMS 0 0 0 5688 828992.25 0.2080126389560628 3 -0.1068534851074218 1 Unmodified _SSFIGKVKS_ REV__ENST00000335500.8_1_17:42474164-42474308:-|nuORF 20.41453444215458 0.284085796332423 1 SS{M(Oxidation (M))|F}{I|L}SKVGK 9 -1 + 74.607 0.0 0.0 7.8407 7.8407 97.842 0.0 0.0 0.0 57.65533861204942 10.590992953673537 10.590992953673537 74.60708479613345 0 0.805462187404089 1.6989700043360187 0.0 0.0 SS{M(Oxidation (M))|F}{I|L}SKVGK 7.8407 - 120 + 1 2.158 40290.6 1.0 2306 3381 5688 DOHH2_400M_050219_1,5689 DOHH2_400M_050219_1,5689,SSFIGKVKS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5690 30.894 46.0 865870.0 25 0 118520.0 8618 EVEEDEYKAFY 11 67 711.3076441748542 1420.6007354165083 2 711.3080932497978 MULTI CID FTMS 0 0 0 5688 998600.875 0.0408370898842944 6 -0.3657302856445312 2 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 8.155526934196011 0.8366696279279818 1 [QA]HDEAQQGGA{M(Oxidation (M))|F}Y 13 9 + 65.765 0.0 0.0 4.6294 4.6294 76.421 0.0 0.0 0.0 0.4986822074547774 55.46398869151969 0.4986822074547774 3.01029995663982 0 0.8935078169319297 0.0 0.0 0.7614393726401688 [QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQNAGA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQQGQ{M(Oxidation (M))|F}Y;[QA]E[HD]AQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]GGA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QGGA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAQNAQ{M(Oxidation (M))|F}Y;[QA]E[HD]AQNAGA{M(Oxidation (M))|F}Y 4.6294;4.4174;4.1618;4.1618;4.1571;3.9907;3.9907;3.9499;3.9499;3.9452 -;-;-;-;-;-;-;-;-;- 1492 1 2.158 35921.2 1.0 2307 3381 5688 DOHH2_400M_050219_1,5690 DOHH2_400M_050219_1,5690,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5691 30.897 96.0 436650.0 25 0 38246.0 + 38450 TSDDSAVNMY 10 80 551.7215169007633 1101.4284808683265 2 551.7216064333916 MULTI CID FTMS 0 0 0 5688 664817.4375 1.0 0 0.0 3 Unmodified _TSDDSAVNMY_ ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L 68.08070601005525 0.0189984391031388 1 {[MG]|[TS]}DD{[SA]|[TG]}VNMY 10 0 + 40.741 0.0 0.0 3.6989 3.6989 82.07 0.0 0.0 0.0 5.241049764686139 23.75115312462057 5.241049764686139 12.659389507179345 0 0.8935078169319297 0.0 1.7218487496163564 0.3494850021680094 + + {[MG]|[TS]}DD{[SA]|[TG]}VNMY;{[MG]|[TS]}DD{[SA]|[TG]}VGGMY;{[MG]|[TS]}DWWNMY;{[MG]|[TS]}DWWGGMY 3.6989;2.5495;2.333;1.1748 +;-;-;- + 87 1 2.158 37657.8 1.0 2308 3381 5688 DOHH2_400M_050219_1,5691 DOHH2_400M_050219_1,5691,TSDDSAVNMY True True TSDDSAVNMY 30.896544 551.721606433392 3016575.5 5688.0 nc|ENSG00000121210|A2VDJ0|TMEM131L;;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;;ENSG00000121210|ENST00000409959|TMEM131L;;nc|ENSG00000121210|A2VDJ0-6|TMEM131L 5.7428975105285645 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5692 30.899 120.0 488310.0 25 0 46079.0 + 2541 ASEFPGAQHY 10 90 553.7487966257635 1105.4830403183269 2 553.7488281130791 MULTI CID FTMS 0 0 0 5688 420400.21875 0.3435500834409906 5 -0.273956298828125 4 Unmodified _ASEFPGAQHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000566509.5_1_15:73052730-73067416:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-5|ADPGK 37.97399986684836 0.1789611706409123 1 {[SA]|[TG]}E{[WT]|[RM]}P{M(Oxidation (M))|F} 7 7 35.959 0.0 0.0 3.2528 0.0 0.0 0.0 284.0888926730145 284.0888926730145 23.37902692822264 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.3494850021680094 0.0 {[SA]|[TG]}E{[WT]|[RM]}P{M(Oxidation (M))|F} 3.2528 - 244 1 2.158 50564.2 1.0 2309 3381 5688 DOHH2_400M_050219_1,5692 DOHH2_400M_050219_1,5692,ASEFPGAQHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5693 30.905 335.0 380830.0 25 0 42719.0 -1 CPNARCQFAFY 11 111 717.3087018027306 1432.6028506722612 2 717.3082763552666 MULTI CID FTMS 0 0 0 5688 310009.8125 0.3105949928787707 -3 0.20245361328125 5 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PNARC(Carbamidomethyl (C))QFAFY_ ENSG00000129353|ENST00000335757|SLC44A2;ENST00000589561.5_1_19:10746968-10754058:+|nuORF;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;nc|ENSG00000129353|Q8IWA5-3|SLC44A2 13.90604991867851 0.7458848613461305 1 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 88.867 0.0 0.0 6.2032 6.2032 80.917 0.0 0.0 0.0 2.3888208891513614 11.382353118286233 2.3888208891513614 2.3888208891513614 0 0.8935078169319297 1.0 0.7302046884880937 1.579689690656103 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;[HD][NP]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQNA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y 6.2032;6.0364;5.6476;5.5681;5.5681;5.5681;5.4031;5.4031;5.4031;5.1592 -;-;-;-;-;-;-;-;-;- 2577 1 2.158 95288.8 1.0 2310 3381 5688 DOHH2_400M_050219_1,5693 DOHH2_400M_050219_1,5693,CPNARCQFAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5694 30.908 149.0 405380.0 25 0 34686.0 + 6768 EEADHTVGF 9 94 502.7195919895698 1003.4246310459396 2 502.7196838259697 MULTI CID FTMS 0 0 0 5688 239727.65625 1.0 0 0.0 6 Unmodified _EEADHTVGF_ ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188 24.67388899826682 0.2172451872415813 1 EE[YN]EVG 7 5 24.415 0.0 0.0 2.4331 0.0 0.0 0.0 180.06968654814594 180.06968654814594 3.4455318530342574 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.274227503252014 0.0 EE[YN]EVG 2.4331 - 312 1 2.158 51301.9 1.0 2311 3381 5688 DOHH2_400M_050219_1,5694 DOHH2_400M_050219_1,5694,EEADHTVGF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5695 30.915 414.0 222950.0 25 0 26806.0 -1 0 117 495.5558511574063 2967.291448144838 6 495.7229186892509 MULTI CID FTMS 0 0 0 5688 173514.703125 0.5174556591031535 -3 0.20245361328125 7 1 VKP 3 -1 13.188 0.0 0.0 0.44443 0.0 0.0 2108.955710558629 531.0975435846311 2640.0532541432603 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VKP 0.44443 - 98 + 1 2.158 76644.3 1.0 2312 3381 5688 DOHH2_400M_050219_1,5695 DOHH2_400M_050219_1,5695, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5696 30.921 288.0 282480.0 25 0 34486.0 19679 LGLRLIHY 8 102 492.8010486328253 983.5875443324506 2 492.8008911013603 MULTI CID FTMS 0 0 0 5688 150673.0625 0.1127497112236419 3 -0.1068534851074218 8 Unmodified _LGLRLIHY_ nc|ENSG00000211713|A0A1B0GX49|TRBV6-4 5.760428011301431 0.7893668129297577 1 {I|L}S 2 7 19.464 0.0 0.0 1.9789 0.0 0.0 0.0 780.4353121393186 780.4353121393186 7.245462655597095 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}S 1.9789 - 52 + 1 2.158 67377.8 1.0 2313 3381 5688 DOHH2_400M_050219_1,5696 DOHH2_400M_050219_1,5696,LGLRLIHY False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 5697 30.935 800.0 190020.0 25 0 15992.0 + 25526 NEQDGVTYSY 10 182 588.2468224341983 1174.4790919351965 2 588.2477905154228 MULTI CID FTMS 0 0 0 5688 144062.515625 0.2695882446438786 3 -0.1068534851074218 9 Unmodified _NEQDGVTYSY_ ENSG00000168528|ENST00000373709|SERINC2;ENST00000491976.1_1_1:31888748-31907043:+|nuORF;nc|ENSG00000168528|Q96SA4-2|SERINC2;nc|ENSG00000168528|Q96SA4-3|SERINC2;nc|ENSG00000168528|Q96SA4-4|SERINC2 8.745405648335112 0.6861838735306406 1 STNG{I|L}PR 7 9 30.319 0.0 0.0 2.5815 0.0 0.0 431.0856531700459 0.0 431.0856531700459 0.0 10.314185079523437 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.5629529932484498 STNG{I|L}PR 2.5815 - 447 + 1 2.158 113937.6 0.6600000262260437 2314 3381 5688 DOHH2_400M_050219_1,5697 DOHH2_400M_050219_1,5697,NEQDGVTYSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5699 30.943 232.0 401620.0 25 0 35184.0 + 17250 KLMRRYIAM 9 121 394.5600783822565 1180.6584057469695 3 394.5593444705009 MULTI CID FTMS 0 0 0 5698 165910.15625 0.8938586754989745 -2 0.0996246337890625 1 Unmodified _KLMRRYIAM_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7 8.155526934196011 0.6299788542272896 1 KM 2 7 23.856 0.0 0.0 2.0206 0.0 0.0 0.0 918.500465972112 918.500465972112 5.272861173562671 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 KM 2.0206 - 100 + 1 2.165 77288.5 1.0 2315 3382 5698 DOHH2_400M_050219_1,5699 DOHH2_400M_050219_1,5699,KLMRRYIAM False True KLMRRYIAM 30.9428 394.559344470501 1088843.0 5698.0 nc|ENSG00000166508|P33993-3|MCM7;;ENSG00000166508|ENST00000303887|MCM7 2.2972992658615112 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5700 30.952 542.0 171600.0 25 0 23709.0 -1 0 128 530.281518243329 529.2742417767289 1 532.2958251833916 MULTI CID FTMS 0 0 0 5698 80336.0234375 0.6828347752776757 1 -0.0347785949707031 2 1 Y 1 -1 13.495 0.0 0.0 2.5497 0.0 0.0 348.20003630973514 0.0 348.20003630973514 0.0 3.406206186877938 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5497 - 54 + 1 2.165 75327.1 1.0 2316 3382 5698 DOHH2_400M_050219_1,5700 DOHH2_400M_050219_1,5700, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5701 30.956 178.0 379940.0 25 0 32083.0 + 816 AESYRIQTY 9 95 565.7773946722363 1129.5402364112724 2 565.7776367068291 MULTI CID FTMS 0 0 0 5698 283354.9375 0.4949013582150764 -2 0.0996246337890625 3 Unmodified _AESYRIQTY_ ENSG00000140694|ENST00000437198|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;nc|ENSG00000140694|O95453-4|PARN 57.24910588100465 0.0276051374632116 1 [TA]DYR{I|L}QTY 9 2 + 43.394 0.0 0.0 3.8418 3.8418 70.853 0.0 0.0 0.0 1.064921830680703 12.98332479720628 1.064921830680703 1.064921830680703 0 1.6237125054200234 0.0 0.3054621874040891 0.0 [TA]DYR{I|L}QTY;{[CP]|[EA]}SYR{I|L}QTY;[TA]DYR{I|L}[AG]TY;{[CP]|[EA]}SYR{I|L}[AG]TY;{[ES]|[DT]|[{I|L}C]}AYR{I|L}QTY;[TA]GY[RV]TAEY;[YT]Q[RV]TAEY;[TA]GY[RV]{[CP]|[EA]}TY;{[ES]|[DT]|[{I|L}C]}AYR{I|L}[AG]TY;[YT]Q[RV]{[CP]|[EA]}TY 3.8418;3.7475;3.0266;2.9323;2.5852;2.3716;2.2784;1.8432;1.7699;1.7499 -;+;-;-;-;-;-;-;-;- + 613 1 2.165 56260.8 1.0 2317 3382 5698 DOHH2_400M_050219_1,5701 DOHH2_400M_050219_1,5701,AESYRIQTY True True AESYRIQTY 30.955798 565.7775 2793296.0 5698.0 nc|ENSG00000140694|O95453-3|PARN;;ENSG00000140694|ENST00000437198|PARN;;nc|ENSG00000140694|O95453-4|PARN;;nc|ENSG00000140694|O95453-2|PARN 7.653322219848633 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5702 30.96 233.0 428210.0 25 0 45070.0 + 5447 DLQKKPLL 8 132 477.802818518687 953.591084104174 2 477.8027221560478 MULTI CID FTMS 0 0 0 5698 258408.421875 0.6326523687463941 -2 0.0996246337890625 4 Unmodified _DLQKKPLL_ ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL 54.773552608820026 0.1167943196628344 1 D{I|L}QKKP{I|L}{I|L} 8 0 + 76.527 0.0 0.0 8.0251 8.0251 85.884 0.0 0.0 0.0 45.56061091185278 10.177287669604311 10.177287669604311 3.0102999566398125 0 1.0994850021680094 2.0 0.0 0.5 + + D{I|L}QKKP{I|L}{I|L};{I|L}DQKKP{I|L}{I|L};D{I|L}QKK{I|L}P{I|L};{I|L}DQKK{I|L}P{I|L};D{I|L}[AG]KKP{I|L}{I|L};{I|L}D[AG]KKP{I|L}{I|L};D{I|L}[AG]KK{I|L}P{I|L};{I|L}D[AG]KK{I|L}P{I|L} 8.0251;7.7094;7.6614;7.3458;7.0538;6.7381;6.6902;6.3745 +;-;-;-;-;-;-;- + 358 + 1 2.165 79093.6 1.0 2318 3382 5698 DOHH2_400M_050219_1,5702 DOHH2_400M_050219_1,5702,DLQKKPLL True True DLQKKPLL 30.96016 477.8031 2630325.75 5698.0 ENSG00000138078|ENST00000409411|PREPL;;nc|ENSG00000138078|Q4J6C6|PREPL;;nc|ENSG00000138078|Q4J6C6-2|PREPL;;nc|ENSG00000138078|Q4J6C6-3|PREPL 5.7439500490824384 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5703 30.969 522.0 291090.0 25 0 36381.0 + 16290 IWAVILTQF 9 152 545.8184693473087 0 545.8185912966728 PEAK CID FTMS 0 0 0 5698 142565.09375 0.6694030697192183 -2 0.0996246337890625 5 Unmodified _IWAVILTQF_ REV__ENSG00000174373|ENST00000680220|RALGAPA1;REV__ENST00000443361.1_1_9:108283251-108284913:+|nuORF;REV__ENST00000554652.5_1_14:36147090-36221314:-|nuORF;REV__ENST00000554704.5_1_14:36176787-36221314:-|nuORF;REV__nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0|RALGAPA1 11.640296217721598 0.2934555500198502 1 KTT 3 -1 24.922 0.0 0.0 2.2872 0.0 0.0 120.06182706448917 636.3475875676297 756.4094146321189 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 KTT 2.2872 - 191 + 1 2.165 120738.0 1.0 2319 3382 5698 DOHH2_400M_050219_1,5703 DOHH2_400M_050219_1,5703,IWAVILTQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5705 30.974 57.0 960370.0 25 0 99801.0 + -1 LNYHLSKMK 9 76 575.3082694743387 1148.6019860154772 2 575.3083984255791 MULTI CID FTMS 0 0 0 5704 664730.6875 1.0 0 0.0 1 Oxidation (M) _LNYHLSKM(Oxidation (M))K_ REV__ENST00000257770.7_1_6:86180969-86181005:+|nuORF 20.453626601364224 0.2830276176381075 1 {I|L}{I|L}DQA[{I|L}T]T{M(Oxidation (M))|F}K 10 -1 + 43.407 0.0 0.0 3.7791 3.7791 75.21 0.0 0.0 0.0 1.1526724229768988 7.256831724973892 1.1526724229768988 4.564636919316193 0 1.0 0.0 0.0 0.1803115997617927 {I|L}{I|L}DQA[{I|L}T]T{M(Oxidation (M))|F}K;[KT]T[DV][{I|L}P]TT{[CA]|SS};{I|L}{I|L}D[AG]A[{I|L}T]T{M(Oxidation (M))|F}K;[KT]T[{I|L}P][DV]TT{[CA]|SS};[KT]T[{I|L}P][VS]ET{[CA]|SS};[RH]EW[{I|L}P][PS]K;[KT]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[H{I|L}]T{[CA]|SS};{I|L}{I|L}D{[DS]|[MA]|[CV]|TT}RR{M(Oxidation (M))|F}K;[KT][WE][{I|L}P]G[YR];[KT]T[{I|L}P]WT[R{M(Oxidation (M))|F}] 3.7791;3.3817;2.9812;2.5916;1.8942;1.6657;1.5838;1.4047;1.0196;0.72474 -;-;-;-;-;-;-;-;-;- 260 + 1 2.165 48019.9 1.0 2320 3383 5704 DOHH2_400M_050219_1,5705 DOHH2_400M_050219_1,5705,LNYHLSKMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5706 30.988 800.0 118100.0 25 0 7812.2 + 41095 VNKIKEIAV 9 152 507.3213559886028 1012.6281590440057 2 507.3211547732353 MULTI CID FTMS 0 0 0 5704 104069.0546875 0.1960755420293541 3 -0.1929874420166015 2 Unmodified _VNKIKEIAV_ ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 38.17557092003332 0.0854718145212029 1 {[QN]|[E{I|L}]|[KN]}K[K{I|L}]ANVV 9 4 + 25.533 0.0 0.0 2.5215 2.5215 73.802 0.0 0.0 0.0 8.486346860820479 7.147642715192507 7.147642715192507 6.478174818886373 0 0.0 0.8860566476931632 0.1989700043360188 0.0 {[QN]|[E{I|L}]|[KN]}K[K{I|L}]ANVV;{[QN]|[E{I|L}]|[KN]}KRRNVV;{[NV]|[RG]}K{I|L}[WR]VV;{[QN]|[E{I|L}]|[KN]}KAK{I|L}NVV;{[QN]|[E{I|L}]|[KN]}K[K{I|L}]AGGVV;{[QN]|[E{I|L}]|[KN]}K[K{I|L}]AAAAV;{[QN]|[E{I|L}]|[KN]}KRRGGVV;{[QN]|[E{I|L}]|[KN]}KRRAAAV;{[QN]|[E{I|L}]|[KN]}K[K{I|L}]{[NV]|[RG]}AV;{[QN]|[E{I|L}]|[KN]}KAK{I|L}GGVV 2.5215;1.8817;1.6834;1.6461;1.6121;1.5813;0.96705;0.9362;0.9362;0.73672 -;-;-;-;-;-;-;-;-;- 389 1 2.165 78076.3 0.5899999737739563 2321 3383 5704 DOHH2_400M_050219_1,5706 DOHH2_400M_050219_1,5706,VNKIKEIAV True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5707 30.991 148.0 499520.0 25 0 74358.0 + 45291 YSDSLVQKGY 10 111 580.284835747737 1158.555118562274 2 580.2852661013603 MULTI CID FTMS 0 0 0 5704 302433.4375 0.2581478785230137 -2 0.0809688568115234 3 Unmodified _YSDSLVQKGY_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 76.82478488871298 0.0187167883027705 1 YSDS{I|L}VQKGY 10 0 + 99.052 0.0 0.0 8.5497 8.5497 92.625 0.0 0.0 0.0 84.44836915233068 13.46787486224656 13.46787486224656 9.164539485499262 0 1.2231975075880328 2.0 0.0 0.4247425010840047 + + YSDS{I|L}VQKGY;YSDS{I|L}V[AG]KGY;YSD{[NV]|[RG]}[{I|L}T]KGY;Y{[C(Carbamidomethyl (C))E]|[WC]}{I|L}VQKGY;YSDKK{[YD]|[{M(Oxidation (M))|F}M]}{I|L}Q;Y{[C(Carbamidomethyl (C))E]|[WC]}{I|L}V[AG]KGY;YSDKK{[WT]|[RM]}[MT];{[QV]|[N{I|L}]|[RA]|[KV]}[Y{M(Oxidation (M))|F}]KKD[MT] 8.5497;7.7586;4.6698;4.2976;4.0377;3.5028;3.2881;0.1002 +;-;-;-;-;-;-;- + 394 + 1 2.165 60464.7 1.0 2322 3383 5704 DOHH2_400M_050219_1,5707 DOHH2_400M_050219_1,5707,YSDSLVQKGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5708 30.995 230.0 494140.0 25 0 49935.0 + 10476 SQKRHWTF 8 129 363.8586629321906 1088.554159396772 3 363.8575927615166 MULTI CID FTMS 0 0 0 5704 251917.296875 0.3701742502451878 -2 0.0809688568115234 4 Unmodified _FTNFISFTL_ ENST00000510020.5_1_5:86704942-86708611:-|nuORF;ENST00000504878.1_1_5:86708449-86708611:-|nuORF;ENSG00000134480|ENST00000256897|CCNH;ENST00000505230.1_1_5:86705105-86708611:-|nuORF 14.838274106304384 0.4350285940865338 1 GTG{M(Oxidation (M))|F}E 5 7 29.949 0.0 0.0 2.7512 0.0 0.0 579.3300038068375 0.0 579.3300038068375 0.0 14.89909385331508 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 GTG{M(Oxidation (M))|F}E 2.7512 - 168 1 2.165 95136.5 1.0 2323 3383 5704 DOHH2_400M_050219_1,5708 DOHH2_400M_050219_1,5708,FTNFISFTL False False SQKRHWTF 30.995243 363.857592761517 3527780.5 5704.0 ENST00000510020.5_1_5:86704942-86708611:-|nuORF;;ENST00000504878.1_1_5:86708449-86708611:-|nuORF;;ENSG00000134480|ENST00000256897|CCNH;;ENST00000505230.1_1_5:86705105-86708611:-|nuORF 4.360852400461833 3.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5710 31.012 800.0 124720.0 25 0 8942.6 + 29016 QEDPNYSPQRF 11 115 690.8128611881443 1379.6111694430886 2 690.8142578005791 MULTI CID FTMS 0 0 0 5709 86873.234375 0.5776900903978682 3 -0.2588768005371094 1 Unmodified _QEDPNYSPQRF_ ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 74.7717668357584 0.0185759530880285 1 QEDPNYS[QP]R{M(Oxidation (M))|F} 11 0 + 83.127 0.0 0.0 6.0254 6.0254 82.408 0.0 0.0 0.0 59.83465789485666 5.591960214146596 5.591960214146596 3.8907562519182193 0 1.1307196863200843 1.3979400086720375 0.0 1.0629529932484498 + + QEDPNYS[QP]R{M(Oxidation (M))|F};QEDPNYQ[PS]R{M(Oxidation (M))|F};QEDPGGYS[QP]R{M(Oxidation (M))|F};QEDPGGYQ[PS]R{M(Oxidation (M))|F};QEDPNY[AG][PS]R{M(Oxidation (M))|F};[AG]EDPNYS{M(Oxidation (M))|F}{[VA]|[{I|L}G]}[NP];[AG]EDPGGYS{M(Oxidation (M))|F}{[VA]|[{I|L}G]}[NP];QEYYYS[QP]R{M(Oxidation (M))|F};QEYYYQ[PS]R{M(Oxidation (M))|F};[AG]EYYYS{M(Oxidation (M))|F}{[VA]|[{I|L}G]}[NP] 6.0254;5.7434;5.3637;5.0817;5.0817;4.7583;4.1006;3.6147;3.3327;2.3428 +;-;-;-;-;-;-;-;-;- + 290 + 1 2.165 73717.1 0.6399999856948853 2324 3384 5709 DOHH2_400M_050219_1,5710 DOHH2_400M_050219_1,5710,QEDPNYSPQRF True True QEDPNYSPQRF 31.011616 690.814257800579 1242413.375 5709.0 nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000204463|P46379-5|BAG6;;nc|ENSG00000204463|P46379-2|BAG6;;nc|ENSG00000204463|P46379-4|BAG6;;ENSG00000204463|ENST00000676615|BAG6 10.076662063598633 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5711 31.019 387.0 274150.0 25 0 20279.0 + 276 ADIDTRSEF 9 149 527.2446526547772 1052.4747523763542 2 527.2454711794853 MULTI CID FTMS 0 0 0 5709 177506.125 0.5433098152705155 3 -0.2588768005371094 2 Unmodified _ADIDTRSEF_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 16.149105407346934 0.3995459350917656 1 AD{I|L}D 4 5 54.302 0.0 0.0 5.1594 0.0 0.0 0.0 635.2792244853466 635.2792244853466 25.349242696482065 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.2887254899964357 0.0 + AD{I|L}D 5.1594 + + 549 + 1 2.165 85554.6 1.0 2325 3384 5709 DOHH2_400M_050219_1,5711 DOHH2_400M_050219_1,5711,ADIDTRSEF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5712 31.032 800.0 176420.0 25 0 9076.4 36694 TDDEDGESRY 10 155 593.7307222832318 1185.4468916332637 2 593.7310668826103 MULTI CID FTMS 0 0 0 5709 130002.109375 1.0 0 0.0 3 Unmodified _TDDEDGESRY_ ENSG00000164061|ENST00000296452|BSN 19.256988751693697 0.5244284437930726 1 {M(Oxidation (M))|F}GSAKYY 7 9 39.765 0.0 0.0 3.3544 0.0 0.0 351.05519202974887 0.0 351.05519202974887 0.0 16.083245659840472 0.0 0.0 0 1.674742501084005 0.0 0.7134679910804405 0.0 {M(Oxidation (M))|F}GSAKYY 3.3544 - 921 + 1 2.165 107865.7 0.6499999761581421 2326 3384 5709 DOHH2_400M_050219_1,5712 DOHH2_400M_050219_1,5712,TDDEDGESRY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5713 31.038 277.0 241040.0 25 0 12931.0 + 36809 TEIEHKVAF 9 111 537.2854597613469 1072.5563665894938 2 537.2850829958916 MULTI CID FTMS 0 0 0 5709 123499.671875 1.0 0 0.0 4 Unmodified _TEIEHKVAF_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 46.0223103267499 0.0490911897871712 1 {[ET]|[MV]}{I|L}EHKVA{M(Oxidation (M))|F} 9 0 + 35.868 0.0 0.0 3.3441 3.3441 71.339 0.0 0.0 0.0 2.4730248405664668 2.4730248405664668 2.4730248405664668 2.4730248405664668 0 2.353917193908117 0.0 0.1747425010840047 0.0 + + {[ET]|[MV]}{I|L}EHKVA{M(Oxidation (M))|F};[HK]VVHE{I|L}[DP];{[ET]|[MV]}{I|L}[NP]P[KG]A{M(Oxidation (M))|F};{[ET]|[MV]}{I|L}[NP]P[KQ]{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}TEHKVA{M(Oxidation (M))|F};[HK]VE{I|L}MVA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}HKVMVA{M(Oxidation (M))|F};{[ET]|[MV]}{I|L}[{I|L}P][WP]A{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}[YK]{I|L}MVA{M(Oxidation (M))|F};[HV]VKHEDP{I|L} 3.3441;3.1135;2.6022;1.9718;1.9432;1.9255;1.8517;1.7666;1.5824;1.4726 +;-;-;-;-;-;-;-;-;- + 343 1 2.165 53240.2 1.0 2327 3384 5709 DOHH2_400M_050219_1,5713 DOHH2_400M_050219_1,5713,TEIEHKVAF True True TEIEHKVAF 31.03752 537.285082995892 621640.6875 5709.0 ENST00000394768.6_2_14:64542710-64692241:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2;;nc|ENSG00000054654|Q8WXH0-7|SYNE2 7.152192910512288 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5714 31.051 800.0 110110.0 25 0 7848.6 + + 43551 AVPYPQRDMPIQA 13 92 751.3774165334307 1500.7402801336614 2 751.3778564333916 MULTI CID FTMS 0 0 0 5709 121467.71875 0.9343927294157056 1 -0.0758247375488281 5 Unmodified _WYLFFPHHRAQ_ P02666 6.2057823575117 0.8458686499021061 1 {[VA]|[{I|L}G]}PY[WK]{I|L}[WE][Y{M(Oxidation (M))|F}] 11 -1 + 36.826 0.0 0.0 2.4538 2.4538 81.115 0.0 0.0 0.0 10.438329016428623 2.0277122468424835 2.0277122468424835 23.51484160381827 0 0.2614393726401688 2.0 0.0 0.3252574989159953 {[VA]|[{I|L}G]}PY[WK]{I|L}[WE][Y{M(Oxidation (M))|F}];[QA]E[WE]{I|L}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[Q{I|L}];[QA]E[WE]{I|L}PQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[Q{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[RE]|[WV]}QP{I|L}[WE][Y{M(Oxidation (M))|F}];{[CP]|[EA]}Q[WE]{I|L}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[Q{I|L}];{[CP]|[EA]}Q[WE]{I|L}PQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[Q{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}[WE][Y{M(Oxidation (M))|F}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QP{I|L}[WE][Y{M(Oxidation (M))|F}];[QA]E[WE]{I|L}{M(Oxidation (M))|F}[{I|L}P]Q[Q{I|L}];{[CP]|[EA]}Q[WE]{I|L}{M(Oxidation (M))|F}[{I|L}P]Q[Q{I|L}] 2.4538;0.88696;0.88696;0.84756;0.68637;0.68637;0.64697;0.64697;0.56903;0.36845 -;-;-;-;-;-;-;-;-;- 705 + 1 2.165 67979.6 0.6299999952316284 2328 3384 5709 DOHH2_400M_050219_1,5714 DOHH2_400M_050219_1,5714,WYLFFPHHRAQ False False AVPYPQRDMPIQA 31.051368 751.377856433392 678154.625 5709.0 P02666 3.657978097597758 2.0 False 13.0 True unknown PXD020620_cell_line DOHH2_400M_050219_1 5715 31.065 800.0 69845.0 25 0 3721.0 + 25572 LVSEYQQYQDAT 12 105 722.8341644985311 1443.653776063862 2 722.8339721560478 MULTI CID FTMS 0 0 0 5709 113110.6484375 1.0 0 0.0 6 Unmodified _NEYFFDRNRPS_ ENSG00000261456|ENST00000568584|TUBB8;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000196230|ENST00000327892|TUBB;ENST00000427668.1_1_1:53461605-53461695:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;ENST00000415481.1_1_1:809210-809726:+|nuORF;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000258947|ENST00000315491|TUBB3;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000402141.1_1_6:143757385-143757844:+|nuORF;ENSG00000173213|ENST00000308911|TUBB8B;ENST00000290377.9_1_9:141071128-141071713:+|nuORF 4.897010918128616 0.8520435188433833 1 [YQ]DAGTS 7 8 25.398 0.0 0.0 1.7593 0.0 0.0 0.0 718.3303257066933 718.3303257066933 3.9717699250588367 0.0 0.0 0.0 0 0.5 0.0 0.0 0.5484550065040282 [YQ]DAGTS 1.7593 - 737 1 2.165 45131.4 0.6299999952316284 2329 3384 5709 DOHH2_400M_050219_1,5715 DOHH2_400M_050219_1,5715,NEYFFDRNRPS False False LVSEYQQYQDAT 31.065199 722.833972156048 502729.59375 5709.0 ENSG00000261456|ENST00000568584|TUBB8;;ENSG00000137267|ENST00000333628|TUBB2A;;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;;ENSG00000104833|ENST00000264071|TUBB4A;;ENSG00000196230|ENST00000327892|TUBB;;ENST00000427668.1_1_1:53461605-53461695:+|nuORF;;nc|ENSG00000258947|Q13509-2|TUBB3;;ENST00000415481.1_1_1:809210-809726:+|nuORF;;ENSG00000176014|ENST00000317702|TUBB6;;ENSG00000258947|ENST00000315491|TUBB3;;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;;ENSG00000137285|ENST00000259818|TUBB2B;;ENSG00000188229|ENST00000340384|TUBB4B;;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;;ENST00000402141.1_1_6:143757385-143757844:+|nuORF;;ENSG00000173213|ENST00000308911|TUBB8B;;ENST00000290377.9_1_9:141071128-141071713:+|nuORF 5.944627602895101 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5716 31.071 252.0 238960.0 25 0 19829.0 + 34880 SQGISPIVY 9 102 482.26019406532754 962.5058351974552 2 482.2606994509697 MULTI CID FTMS 0 0 0 5709 104183.5 0.6268295019400215 -1 0.0258846282958984 7 Unmodified _SQGISPIVY_ ENST00000457422.6_1_17:42755944-42756196:-|nuORF 47.74868867922204 0.0453060283459952 1 [{I|L}P]{[{M(Oxidation (M))|F}D]|MM}P{I|L}VY 8 5 + 39.714 0.0 0.0 4.1261 4.1261 74.889 0.0 0.0 0.0 6.789623657894033 25.7883687423864 6.789623657894033 3.252449958617305 0 1.0 1.2218487496163564 0.5891368308784531 0.0 [{I|L}P]{[{M(Oxidation (M))|F}D]|MM}P{I|L}VY;[{I|L}P]V[TA][NS]VY;{[NV]|[RG]}DSP[R{I|L}]Y;[{I|L}P]V[TA]{[WN]|[YH]}Y;[TP][WQ]G{I|L}VY;[TP][WQ][R{I|L}]Y 4.1261;3.7882;2.6858;2.2325;1.6719;0.2016 -;-;-;-;-;- 95 1 2.165 51810.3 1.0 2330 3384 5709 DOHH2_400M_050219_1,5716 DOHH2_400M_050219_1,5716,SQGISPIVY True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5718 31.076 64.0 714910.0 25 0 87137.0 + 4289 DAREKISL 8 65 466.2641463883416 930.5137398434832 2 466.2641174197197 MULTI CID FTMS 0 0 0 5717 703893.0625 0.3738556648767068 3 -0.2370319366455078 1 Unmodified _DAREKISL_ ENSG00000100227|ENST00000252115|POLDIP3;ENST00000491021.1_1_22:42993722-42998991:-|nuORF;nc|ENSG00000100227|Q9BY77-2|POLDIP3 32.78568957990786 0.3549862272178655 1 {[TV]|[{I|L}S]}AAAAD{I|L} 8 7 28.913 0.0 0.0 3.1072 0.0 0.0 0.0 215.1040851222428 215.1040851222428 12.715299873086607 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.4247425010840047 0.0 {[TV]|[{I|L}S]}AAAAD{I|L} 3.1072 - 78 1 2.165 40705.0 1.0 2331 3385 5717 DOHH2_400M_050219_1,5718 DOHH2_400M_050219_1,5718,DAREKISL False True DAREKISL 31.075851 466.26411741972 9151795.0 5717.0 ENST00000491021.1_1_22:42993722-42998991:-|nuORF;;ENSG00000100227|ENST00000252115|POLDIP3;;nc|ENSG00000100227|Q9BY77-2|POLDIP3 3.826159636179606 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5719 31.078 104.0 440290.0 25 0 56432.0 + 26365 NSVYTNVL 8 84 455.2375477703204 908.4605426074407 2 455.2373535037041 MULTI CID FTMS 0 0 0 5717 367310.21875 0.2395896489127609 4 -0.2847652435302734 2 Unmodified _NSVYTNVL_ ENSG00000142102|ENST00000409548|PGGHG;ENST00000474221.5_1_11:291984-293434:+|nuORF;ENST00000476372.1_1_11:291984-293434:+|nuORF 21.74664581756881 0.5868176546531598 1 V{I|L} 2 6 25.969 0.0 0.0 2.8586 0.0 0.0 678.2975920232597 0.0 678.2975920232597 0.0 14.274400170273578 0.0 0.0 0 0.5 0.0 0.0 0.0 + V{I|L} 2.8586 + + 48 + 1 2.165 40679.7 1.0 2332 3385 5717 DOHH2_400M_050219_1,5719 DOHH2_400M_050219_1,5719,NSVYTNVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5720 31.079 28.0 1572300.0 25 0 199620.0 + 25845 NLDQATRVAY 10 63 575.7958497271349 1149.5771465210696 2 575.7961303591728 MULTI CID FTMS 0 0 0 5717 1615921.625 1.0 0 0.0 3 Unmodified _NLDQATRVAY_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 51.41523569358685 0.0718446036348414 1 {[QV]|[N{I|L}]|[RA]|[KV]}DQATRVAY 10 0 + 71.788 0.0 0.0 6.2448 6.2448 88.066 0.0 0.0 0.0 47.84363347506861 12.134928107446186 12.134928107446186 9.164539485499256 0 1.242992819099939 2.0 0.0 0.3494850021680094 + + {[QV]|[N{I|L}]|[RA]|[KV]}DQATRVAY;{[QV]|[N{I|L}]|[RA]|[KV]}D[AG]ATRVAY 6.2448;5.4476 +;- + 91 + 1 2.165 39925.6 1.0 2333 3385 5717 DOHH2_400M_050219_1,5720 DOHH2_400M_050219_1,5720,NLDQATRVAY True True NLDQATRVAY 31.079251 575.796130359173 16423804.0 5717.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 7.603065013885498 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5721 31.082 118.0 438590.0 25 0 38527.0 + 43264 WFDKESSL 8 89 506.2406635848352 1010.4667742364704 2 506.2405883669853 MULTI CID FTMS 0 0 0 5717 344405.96875 0.5392106939252467 -1 0.0758247375488281 4 Unmodified _WFDKESSL_ REV__ENST00000565493.1_1_20:34636072-34636129:-|nuORF 14.838274106304384 0.6917062315640577 1 {[TV]|[{I|L}S]}[PG][EC]STS 9 -1 23.094 0.0 0.0 2.2855 0.0 0.0 0.0 146.08286348280345 146.08286348280345 3.886212296537014 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.9247425010840048 0.0 {[TV]|[{I|L}S]}[PG][EC]STS 2.2855 - 109 1 2.165 42635.9 1.0 2334 3385 5717 DOHH2_400M_050219_1,5721 DOHH2_400M_050219_1,5721,WFDKESSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5722 31.085 174.0 425830.0 25 0 36455.0 -1 MLPAVKATWL 10 84 382.5524999351576 1144.635670405673 3 382.5523254275322 MULTI CID FTMS 0 0 0 5717 168067.234375 0.781899961931064 -1 0.0758247375488281 5 Oxidation (M) _M(Oxidation (M))LPAVKATWL_ ENSG00000178904|ENST00000392250|DPY19L3;nc|ENSG00000178904|Q6ZPD9-2|DPY19L3 6.630372943996041 0.695967137280542 1 {I|L} 1 -1 15.485 0.0 0.0 1.3528 0.0 0.0 1013.5406977267652 0.0 1013.5406977267652 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3528 + + 10 + 1 2.165 62062.7 1.0 2335 3385 5717 DOHH2_400M_050219_1,5722 DOHH2_400M_050219_1,5722,MLPAVKATWL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5723 31.089 212.0 271770.0 25 0 16620.0 + 8882 FAEHNDLQY 9 83 568.754014230464 1135.493475527728 2 568.7540771365166 MULTI CID FTMS 0 0 0 5717 153153.828125 0.0582978548619538 -2 0.1017093658447265 6 Unmodified _FAEHNDLQY_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 37.97399986684836 0.0865783450051559 1 QY 2 7 26.326 0.0 0.0 2.3184 0.0 0.0 826.3611645919842 0.0 826.3611645919842 0.0 15.523787536356576 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.5 + QY 2.3184 + + 73 + 1 2.165 50317.3 1.0 2336 3385 5717 DOHH2_400M_050219_1,5723 DOHH2_400M_050219_1,5723,FAEHNDLQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5724 31.096 355.0 265200.0 25 0 15796.0 + 787 AESLIAKKI 9 116 486.80822089165264 971.6018888501052 2 486.8081848025322 MULTI CID FTMS 0 0 0 5717 155395.953125 0.1025850949514474 4 -0.2847652435302734 7 Unmodified _AESLIAKKI_ ENSG00000166226|ENST00000299300|CCT2;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2 56.17704186161178 0.0281986971544335 1 {[CP]|[EA]}S{I|L}{I|L}AKK{I|L} 9 0 + 45.684 0.0 0.0 4.702 4.702 88.305 0.0 0.0 0.0 18.47295930833134 12.98332479720628 12.98332479720628 45.68426893869692 0 1.1861818737241734 0.0 0.0 0.0 + + {[CP]|[EA]}S{I|L}{I|L}AKK{I|L} 4.702 + + 414 + 1 2.165 79201.0 1.0 2337 3385 5717 DOHH2_400M_050219_1,5724 DOHH2_400M_050219_1,5724,AESLIAKKI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5725 31.109 800.0 143950.0 25 0 9449.5 + 739 AEQESGLYRY 10 124 608.2868436038689 1214.5591342745377 2 608.2858154177666 MULTI CID FTMS 0 0 0 5717 91357.21875 0.5828501636993307 -1 0.0758247375488281 8 Unmodified _AEQESGLYRY_ ENSG00000112159|ENST00000369393|MDN1 83.42873516780209 0.014257832770272 1 [AG]ESR{I|L}GSEQ 10 7 80.544 0.0 0.0 6.6316 0.0 0.0 0.0 197.05992297164337 197.05992297164337 37.68954998148708 0.0 0.0 0.0 0 1.274227503252014 2.0 1.9916440611282624 0.3807196863200844 [AG]ESR{I|L}GSEQ 6.6316 - 2154 1 2.165 85404.4 0.550000011920929 2338 3385 5717 DOHH2_400M_050219_1,5725 DOHH2_400M_050219_1,5725,AEQESGLYRY True True AEQESGLYRY 31.109339 608.285815417767 838078.1875 5717.0 ENSG00000112159|ENST00000369393|MDN1 7.57522455851237 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5726 31.111 87.0 594790.0 25 0 66490.0 -1 0 86 490.2859109485861 489.2786344819861 1 490.2858764529228 MULTI CID FTMS 0 0 0 5717 612227.4375 0.1226695434210585 5 -0.3316059112548828 9 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L} 4 -1 + 14.157 0.0 0.0 2.8934 2.8934 80.497 0.0 0.0 0.0 3.187587626244124 3.975626893052464 3.187587626244124 14.156687756324686 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L} 2.8934 - 12 + 1 2.165 45925.2 1.0 2339 3385 5717 DOHH2_400M_050219_1,5726 DOHH2_400M_050219_1,5726, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5727 31.116 250.0 300050.0 25 0 37100.0 + 37133 THELFEWGYEY 11 90 491.8835034310222 1472.6286808932666 3 491.8834106326103 MULTI CID FTMS 0 0 0 5717 146051.0 0.6268463177457079 -1 0.0758247375488281 10 Unmodified _THELFEWGYEY_ REV__ENSG00000143315|ENST00000368090|PIGM 2.843284757254958 0.8617331327080043 1 [Y{M(Oxidation (M))|F}]TW 4 -1 28.901 0.0 0.0 1.9625 0.0 0.0 0.0 872.3696062204149 872.3696062204149 12.447274948966935 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.0 [Y{M(Oxidation (M))|F}]TW 1.9625 - 80 + 1 2.165 62551.3 1.0 2340 3385 5717 DOHH2_400M_050219_1,5727 DOHH2_400M_050219_1,5727,THELFEWGYEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5728 31.13 800.0 139600.0 25 0 9819.5 -1 0 107 728.3622183700314 727.3549419034314 1 728.3624755740166 MULTI CID FTMS 0 0 0 5717 134788.28125 0.966769345529278 -1 0.0758247375488281 11 1 [QA]{I|L}{M(Oxidation (M))|F}SY 6 -1 + 61.627 0.0 0.0 8.4728 8.4728 85.521 0.0 0.0 0.0 2.484070091381426 4.313829223104847 2.484070091381426 2.484070091381426 0 1.1989700043360187 0.7695510786217261 0.4247425010840047 0.7059771852360797 [QA]{I|L}{M(Oxidation (M))|F}SY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AQSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASQY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[AG]SY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SAQY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AS[AG]Y;[KP]S{M(Oxidation (M))|F}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KP]SY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SA[AG]Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}AQY 8.4728;8.1313;6.5485;6.389;4.9001;4.8062;4.5187;3.6817;3.1578;2.8881 -;-;-;-;-;-;-;-;-;- 253 1 2.165 83411.3 0.6700000166893005 2341 3385 5717 DOHH2_400M_050219_1,5728 DOHH2_400M_050219_1,5728, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5729 31.145 800.0 111270.0 25 0 10602.0 + + 6856 EEGFPDTGSDHSY 13 113 720.7807459413673 1439.5469389495345 2 720.7820312380791 MULTI CID FTMS 0 0 0 5717 117582.3359375 1.0 0 0.0 12 Unmodified _EEEEEEEEFEL_ ENSG00000168286|ENST00000303596|THAP11 9.38312468134398 0.8308777417566128 1 EEWYGTDP{M(Oxidation (M))|F}G[HC] 12 -1 + 79.0 0.0 0.0 5.4878 5.4878 80.366 0.0 0.0 0.0 4.506402238630017 4.550817314271399 4.506402238630017 3.8302087723894553 0 0.5 1.3979400086720375 1.6989700043360187 0.0 EEWYGTDP{M(Oxidation (M))|F}G[HC];EEG[YE]GTDP{M(Oxidation (M))|F}G[HC];[DP]TMYGTDP{M(Oxidation (M))|F}G[HC];EEG[WY]TDP{M(Oxidation (M))|F}G[HC];EEG[YE]GTDPWEE;EEG{M(Oxidation (M))|F}PDTG[YE][C(Carbamidomethyl (C))H];EEG[WY]TDPWEE;EEWY{I|L}C(Carbamidomethyl (C))P{M(Oxidation (M))|F}G[HC];EEWYGTDPWEE;EEG{M(Oxidation (M))|F}PDT[WY][C(Carbamidomethyl (C))H] 5.4878;5.2217;5.1748;5.0918;4.794;4.7139;4.6661;4.457;4.3675;4.291 -;-;-;-;-;-;-;-;-;- 1276 1 2.165 66481.3 0.6399999856948853 2342 3385 5717 DOHH2_400M_050219_1,5729 DOHH2_400M_050219_1,5729,EEEEEEEEFEL False False EEGFPDTGSDHSY 31.14477 720.782031238079 1481143.25 5717.0 ENSG00000168286|ENST00000303596|THAP11 11.330205917358398 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5730 31.149 194.0 432500.0 25 0 60696.0 + -1 YSQADALKY 9 120 529.726916402979 1057.439279872758 2 529.7267333865166 MULTI CID FTMS 0 0 0 5717 92683.0703125 1.0 0 0.0 13 Oxidation (M) _DVGNTDM(Oxidation (M))KY_ nc|ENSG00000106462|Q15910-4|EZH2;nc|ENSG00000108799|Q92800-4|EZH1;nc|ENSG00000106462|Q15910-3|EZH2;ENSG00000106462|ENST00000320356|EZH2;ENST00000586714.1_1_17:40854552-40854989:-|nuORF;nc|ENSG00000106462|Q15910-5|EZH2;nc|ENSG00000108799|Q92800-3|EZH1;nc|ENSG00000108799|Q92800-2|EZH1;ENSG00000108799|ENST00000428826|EZH1;ENST00000431167.1_1_21:36972032-36972302:-|nuORF;nc|ENSG00000108799|Q92800-5|EZH1;ENST00000492143.5_1_7:148504740-148513906:-|nuORF;nc|ENSG00000106462|Q15910|EZH2 11.640296217721598 0.521594087909532 1 {[{M(Oxidation (M))|F}C]|[YS]}QADA{I|L}KY 9 -1 + 46.335 0.0 0.0 4.3818 4.3818 80.695 0.0 0.0 0.0 0.1579426718323162 9.03089986991943 0.1579426718323162 9.03089986991943 0 0.0 0.0 0.0 0.8252574989159953 {[{M(Oxidation (M))|F}C]|[YS]}QADA{I|L}KY;{[{M(Oxidation (M))|F}C]|[YS]}QADA{I|L}YK;{[{M(Oxidation (M))|F}C]|[YS]}[AG]ADA{I|L}KY;{[{M(Oxidation (M))|F}C]|[YS]}[AG]ADA{I|L}YK;{[{M(Oxidation (M))|F}C]|[YS]}QADA[YK]{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QAD[YK]A{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]ADA[YK]{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]AD[YK]A{I|L} 4.3818;3.5277;3.511;2.6569;1.7491;0.93081;0.87831;0.060009 -;-;-;-;-;-;-;- 579 + 1 2.165 69173.7 1.0 2343 3385 5717 DOHH2_400M_050219_1,5730 DOHH2_400M_050219_1,5730,DVGNTDMKY False False YSQADALKY 31.148507 529.726733386517 3506398.75 5717.0 nc|ENSG00000106462|Q15910-4|EZH2;;nc|ENSG00000108799|Q92800-4|EZH1;;nc|ENSG00000106462|Q15910-3|EZH2;;ENSG00000106462|ENST00000320356|EZH2;;ENST00000586714.1_1_17:40854552-40854989:-|nuORF;;nc|ENSG00000106462|Q15910-5|EZH2;;nc|ENSG00000108799|Q92800-3|EZH1;;nc|ENSG00000108799|Q92800-2|EZH1;;ENSG00000108799|ENST00000428826|EZH1;;ENST00000431167.1_1_21:36972032-36972302:-|nuORF;;nc|ENSG00000108799|Q92800-5|EZH1;;ENST00000492143.5_1_7:148504740-148513906:-|nuORF;;nc|ENSG00000106462|Q15910|EZH2 8.968427658081055 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5731 31.162 800.0 140880.0 25 0 8497.9 + 7157 EENQIVSSY 9 174 534.7461111160459 0 534.7461425662041 PEAK CID FTMS 0 0 0 5717 95691.578125 1.0 0 0.0 14 Unmodified _EENQIVSSY_ ENSG00000105483|ENST00000651546|CARD8;ENST00000377461.8_1_19:48718626-48735356:-|nuORF;ENST00000517510.5_1_19:48707456-48744240:-|nuORF;ENST00000522051.5_1_19:48714969-48735770:-|nuORF;ENST00000522773.5_1_19:48714969-48736545:-|nuORF;nc|ENSG00000105483|Q9Y2G2-1|CARD8;nc|ENSG00000105483|Q9Y2G2-2|CARD8;nc|ENSG00000105483|Q9Y2G2-3|CARD8;nc|ENSG00000105483|Q9Y2G2-4|CARD8;nc|ENSG00000105483|Q9Y2G2-7|CARD8 30.63653989081413 0.1077493867305487 1 {I|L}EE 3 8 19.654 0.0 0.0 1.8411 0.0 0.0 454.2081306721505 239.07888208560783 693.2870127577584 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.0 {I|L}EE 1.8411 - 202 + 1 2.165 86400.5 0.5400000214576721 2344 3385 5717 DOHH2_400M_050219_1,5731 DOHH2_400M_050219_1,5731,EENQIVSSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5733 31.167 50.0 1426900.0 25 0 221090.0 + 13880 HVPEHAVVL 9 74 500.7823168311523 999.5500807291046 2 500.7825805544853 MULTI CID FTMS 0 0 0 5732 1031519.5625 0.7768913750029303 1 -0.0917739868164062 1 Unmodified _HVPEHAVVL_ ENSG00000169710|ENST00000306749|FASN 32.30548876998284 0.1201446275138228 1 [HV]A[EP]HVV{I|L} 9 2 + 62.457 0.0 0.0 6.2486 6.2486 61.205 0.0 0.0 0.0 14.009009156570684 33.773043837969325 14.009009156570684 0.0 0 0.9604093769761876 2.0 0.0 0.0 [HV]A[EP]HVV{I|L};[HV][EP]AHVV{I|L};[HV][EP]HAVV{I|L};[HV][EP]AVHV{I|L};[HV]A[EP]VHV{I|L};[HA][EP]VHVV{I|L};[HV]A[YE][R{I|L}]{I|L};[HA][EP]VVHV{I|L};[HA]V[EP]HVV{I|L};[HA]V[EP]VHV{I|L} 6.2486;6.2486;6.2486;5.7712;5.7712;3.9248;3.6448;3.4474;3.3225;2.8451 -;-;+;-;-;-;-;-;-;- + 203 1 2.165 61128.7 1.0 2345 3386 5732 DOHH2_400M_050219_1,5733 DOHH2_400M_050219_1,5733,HVPEHAVVL True True HVPEHAVVL 31.16713 500.782580554485 47301072.0 5732.0 ENSG00000169710|ENST00000306749|FASN 7.37796417872111 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5734 31.168 50.0 940540.0 25 0 136800.0 -1 GRNHQFMQQEM 11 70 711.3076441748542 1420.6007354165083 2 711.8015624880791 MULTI CID FTMS 0 0 0 5732 1058187.125 0.0593041526862328 11 -0.7522850036621094 2 Oxidation (M) _GRNHQFMQQEM(Oxidation (M))_ ENST00000505973.1_1_2:27821100-27852768:+|nuORF 5.296884461304476 0.8501568894076437 1 ADQAGA[HD]{M(Oxidation (M))|F}Y 10 -1 61.899 0.0 0.0 4.3572 0.0 0.0 327.15361931264107 0.0 327.15361931264107 0.0 48.7113751626007 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.4247425010840047 ADQAGA[HD]{M(Oxidation (M))|F}Y 4.3572 - 1972 + 1 2.165 40645.7 1.0 2346 3386 5732 DOHH2_400M_050219_1,5734 DOHH2_400M_050219_1,5734,GRNHQFMQQEM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5735 31.172 211.0 356490.0 25 0 41850.0 -1 CPNARCQFAFY 11 79 717.3087018027306 1432.6028506722612 2 717.3079101443291 MULTI CID FTMS 0 0 0 5732 400462.5625 0.4012184831985012 2 -0.1457538604736328 3 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PNARC(Carbamidomethyl (C))QFAFY_ ENSG00000129353|ENST00000335757|SLC44A2;ENST00000589561.5_1_19:10746968-10754058:+|nuORF;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;nc|ENSG00000129353|Q8IWA5-3|SLC44A2 13.90604991867851 0.7458848613461305 1 [NP]HDEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 83.664 0.0 0.0 5.84 5.84 86.09 0.0 0.0 0.0 9.640023467284806 11.382353118286233 9.640023467284806 9.098233696509112 0 0.8935078169319297 1.0 0.3807196863200844 1.274227503252014 [NP]HDEAQQNA{M(Oxidation (M))|F}Y;[NP]HDEAQQGGA{M(Oxidation (M))|F}Y;[NP]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;[NP]HDEA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F}Y;[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F}Y;[NP]HDEA[AG]QGGA{M(Oxidation (M))|F}Y;[NP]HDEAQ[AG]GGA{M(Oxidation (M))|F}Y;[NP]HDEA[AG][AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F}Y 5.84;5.2049;5.2049;5.2049;5.1671;4.9327;4.5717;4.5717;4.5717;4.532 -;-;-;-;-;-;-;-;-;- 579 1 2.165 60664.5 1.0 2347 3386 5732 DOHH2_400M_050219_1,5735 DOHH2_400M_050219_1,5735,CPNARCQFAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5736 31.175 142.0 483590.0 25 0 36899.0 + 31840 RTEPFQDGY 9 84 556.7537239400515 1111.4928949469029 2 556.7543212771416 MULTI CID FTMS 0 0 0 5732 381354.90625 0.2178847334028039 -2 0.1671028137207031 4 Unmodified _RTEPFQDGY_ ENSG00000164543|ENST00000319357|STK17A 53.31671820480216 0.0330978755772958 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AAP{M(Oxidation (M))|F}QDGY 10 4 + 78.998 0.0 0.0 7.1074 7.1074 84.772 0.0 0.0 0.0 3.455612550363796 16.53212513775344 3.455612550363796 3.455612550363796 0 1.994702675232516 1.2218487496163564 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AAP{M(Oxidation (M))|F}QDGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}QDGY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AAP{M(Oxidation (M))|F}[AG]DGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}[AG]DGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}{[WN]|[YH]}Y 7.1074;6.7965;6.2829;5.9681;4.055 -;+;-;-;- + 170 1 2.165 58480.5 1.0 2348 3386 5732 DOHH2_400M_050219_1,5736 DOHH2_400M_050219_1,5736,RTEPFQDGY True True RTEPFQDGY 31.175326 556.754321277142 27847158.0 5732.0 ENSG00000164543|ENST00000319357|STK17A 8.333098729451498 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5737 31.178 141.0 811600.0 25 0 99822.0 + 13777 HSGPIHVL 8 102 430.24306507087584 858.4715772085517 2 430.2432739138603 MULTI CID FTMS 0 0 0 5732 354034.84375 0.4348518409679783 -1 0.091278076171875 5 Unmodified _HSGPIHVL_ ENSG00000133740|ENST00000416274|E2F5;nc|ENSG00000133740|Q15329-2|E2F5;nc|ENSG00000133740|Q15329-3|E2F5 34.18733598223924 0.3315367612694167 1 H[QT]M{I|L} 5 6 17.715 0.0 0.0 2.0636 0.0 0.0 230.16274585756008 0.0 230.16274585756008 0.0 3.4902178714588654 0.0 0.0 0 0.6505149978319906 0.0 0.7742275032520141 0.0 H[QT]M{I|L} 2.0636 - 73 + 1 2.165 92896.5 1.0 2349 3386 5732 DOHH2_400M_050219_1,5737 DOHH2_400M_050219_1,5737,HSGPIHVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5738 31.181 158.0 374930.0 25 0 41332.0 + 33408 SGYGRSVSL 9 93 463.2410074253135 924.467461917427 2 463.2408019900322 MULTI CID FTMS 0 0 0 5732 321662.9375 0.6819014220128148 -1 0.091278076171875 6 Unmodified _SGYGRSVSL_ ENST00000572621.5_2_17:1587830-1587986:-|nuORF 49.52724829834842 0.0414064571532091 1 SGY{[QV]|[N{I|L}]|[RA]|[KV]}[TA]S{I|L} 9 3 + 63.68 0.0 0.0 6.8883 6.8883 93.428 0.0 0.0 0.0 40.49226842154184 14.09256854528806 14.09256854528806 15.82142153032656 0 1.579689690656103 1.3010299956639813 0.7302046884880937 0.0 SGY{[QV]|[N{I|L}]|[RA]|[KV]}[TA]S{I|L};[SG]Y{[NV]|[RG]}SVS{I|L};SGY{[QV]|[N{I|L}]|[RA]|[KV]}{[MG]|[TS]}A{I|L};SGY{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};{[TV]|[{I|L}S]}VY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L};[{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))K]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};[VS]{I|L}Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L};[{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))K]{[MG]|[TS]}A{I|L};[{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))K][TA]S{I|L};[{I|L}T][{M(Oxidation (M))|F}T]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L} 6.8883;5.1769;5.0186;4.9382;3.86;3.0246;2.7706;2.6857;2.392;1.4579 -;+;-;-;-;-;-;-;-;- + 243 + 1 2.165 53483.8 1.0 2350 3386 5732 DOHH2_400M_050219_1,5738 DOHH2_400M_050219_1,5738,SGYGRSVSL True True SGYGRSVSL 31.181278 463.240801990032 2359192.0 5732.0 ENST00000572621.5_2_17:1587830-1587986:-|nuORF 4.879757881164551 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5739 31.184 131.0 464240.0 25 0 72593.0 + 45346 YSQADALKY 9 104 529.7604245645598 1057.5062961959195 2 529.7614623904228 MULTI CID FTMS 0 0 0 5732 297086.46875 1.0 0 0.0 7 Unmodified _YSQADALKY_ ENSG00000106462|ENST00000320356|EZH2;ENSG00000108799|ENST00000428826|EZH1;ENST00000431167.1_1_21:36972032-36972302:-|nuORF;ENST00000492143.5_1_7:148504740-148513906:-|nuORF;ENST00000586714.1_1_17:40854552-40854989:-|nuORF;nc|ENSG00000106462|Q15910-3|EZH2;nc|ENSG00000106462|Q15910-4|EZH2;nc|ENSG00000106462|Q15910-5|EZH2;nc|ENSG00000106462|Q15910|EZH2;nc|ENSG00000108799|Q92800-2|EZH1;nc|ENSG00000108799|Q92800-3|EZH1;nc|ENSG00000108799|Q92800-4|EZH1;nc|ENSG00000108799|Q92800-5|EZH1 27.628801355627647 0.1796483985696185 1 YSQAD[{I|L}A]KY 9 0 + 55.524 0.0 0.0 5.2505 5.2505 76.248 0.0 0.0 0.0 35.49730877020661 6.75846205488881 6.75846205488881 1.5296746020854357 0 0.3182503180159344 2.0 0.0 0.0 + + YSQAD[{I|L}A]KY;YSQAK{I|L}WY;YSQA[W{I|L}]KY;YSQAK[NG]KY;YSQW[{I|L}A]KY;YSQAK{I|L}YW;YSQRRWY;YSQRRYW 5.2505;5.1058;5.0891;4.9658;4.6379;4.6114;3.7471;3.2527 +;-;-;-;-;-;-;- + 213 + 1 2.165 51317.3 1.0 2351 3386 5732 DOHH2_400M_050219_1,5739 DOHH2_400M_050219_1,5739,YSQADALKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5740 31.188 212.0 312140.0 25 0 31633.0 + 222 AATGHTVVL 9 82 434.7478118891057 867.4810708450115 2 434.7477905154228 MULTI CID FTMS 0 0 0 5732 218118.609375 1.0 0 0.0 8 Unmodified _AATGHTVVL_ ENSG00000138796|ENST00000309522|HADH;nc|ENSG00000138796|Q16836-2|HADH;nc|ENSG00000138796|Q16836-3|HADH 38.15118350030904 0.0856056900103839 1 TVV{I|L} 4 5 22.708 0.0 0.0 2.6177 0.0 0.0 437.2021046369157 0.0 437.2021046369157 0.0 7.223571942248341 0.0 0.0 0 0.7429928190999391 0.0 0.7742275032520141 0.0 + TVV{I|L} 2.6177 + + 34 1 2.165 56907.2 1.0 2352 3386 5732 DOHH2_400M_050219_1,5740 DOHH2_400M_050219_1,5740,AATGHTVVL True True AATGHTVVL 31.187971 434.747790515423 1353868.875 5732.0 nc|ENSG00000138796|Q16836-3|HADH;;nc|ENSG00000138796|Q16836-2|HADH;;ENSG00000138796|ENST00000309522|HADH 5.152624289194743 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5741 31.194 333.0 251540.0 25 0 20097.0 -1 DWERMPRWYF 10 74 751.3393728883278 1500.6641928434556 2 751.3393432497978 MULTI CID FTMS 0 0 0 5732 153253.0 0.579664207948809 -2 0.1671028137207031 9 Oxidation (M) _DWERM(Oxidation (M))PRWYF_ ENSG00000052802|ENST00000261507|MSMO1 6.2057823575117 0.6979311171683138 1 {[QG]|[NA]}{M(Oxidation (M))|F}[QA]EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 66.173 0.0 0.0 4.4096 4.4096 80.835 0.0 0.0 0.0 8.349041252457809 39.30104282121261 8.349041252457809 9.072459467631006 0 0.8182503180159344 1.0 0.0 0.8494850021680094 {[QG]|[NA]}{M(Oxidation (M))|F}[QA]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[QA]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[QA]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[QA]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GNE[{M(Oxidation (M))|F}V]QQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N[QA]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}NE[{M(Oxidation (M))|F}V]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[QA]R[DG]QNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N[QA]EAQQGGA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N[QA]EAQ[AG]NA{M(Oxidation (M))|F}Y 4.4096;3.805;3.805;3.805;3.6622;3.5085;3.1372;3.0427;2.9039;2.9039 -;-;-;-;-;-;-;-;-;- 369 1 2.165 61891.8 1.0 2353 3386 5732 DOHH2_400M_050219_1,5741 DOHH2_400M_050219_1,5741,DWERMPRWYF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5742 31.198 203.0 178970.0 25 0 19824.0 -1 0 80 495.5558511574063 2967.291448144838 6 495.7236816287041 MULTI CID FTMS 0 0 0 5732 145740.71875 0.4346280650615531 2 -0.1457538604736328 10 1 HY 2 -1 14.949 0.0 0.0 0.50378 0.0 0.0 2649.1572756368287 0.0 2649.1572756368287 0.0 3.8392564687191566 0.0 0.0 0 0.0 0.0 0.0 0.0 HY 0.50378 - 30 + 1 2.165 34571.1 1.0 2354 3386 5732 DOHH2_400M_050219_1,5742 DOHH2_400M_050219_1,5742, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5743 31.201 174.0 519470.0 25 0 30306.0 + 33029 SEPEGEGQAW 10 131 545.2274544595433 1088.4403559858863 2 545.2285034060478 MULTI CID FTMS 0 0 0 5732 144193.671875 0.5938728434177889 -3 0.1929874420166015 11 Unmodified _SEPEGEGQAW_ ENSG00000125637|ENST00000245796|PSD4;ENST00000418251.6_1_2:113931616-113943025:+|nuORF;nc|ENSG00000125637|Q8NDX1-2|PSD4 10.823927491677226 0.6659270209832991 1 [EP]GE[HT]YAW 9 5 [EP]GE[HT]Y + + 17.959 6.4879 0.79771 1.65 1.65 48.645 0.0 0.0 0.0 0.0 4.397649326170807 0.0 0.0 0 0.0 0.0 0.0 0.0 [EP]GE[HT]YAW 1.65 - 273 + 1 2.165 72913.7 1.0 2355 3386 5732 DOHH2_400M_050219_1,5743 DOHH2_400M_050219_1,5743,SEPEGEGQAW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5744 31.215 800.0 250640.0 25 0 24476.0 + 20927 LNEISEETTIQ 11 136 638.8181305961009 0 638.8187133669853 PEAK CID FTMS 0 0 0 5732 133558.546875 0.2822083064009234 -3 0.1929874420166015 12 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 70.33199760932243 0.0021331057501683 1 {I|L}{M(Oxidation (M))|F}G{[QV]|[N{I|L}]|[RA]|[KV]}[DG]DA 9 9 40.234 0.0 0.0 3.1541 0.0 0.0 146.06622284610427 224.10431848697505 370.1705413330793 0.0 0.0 0.0 0.0 0 2.1861818737241734 0.0 0.2887254899964357 1.2887254899964358 {I|L}{M(Oxidation (M))|F}G{[QV]|[N{I|L}]|[RA]|[KV]}[DG]DA 3.1541 - 2387 + 1 2.165 155099.0 0.6700000166893005 2356 3386 5732 DOHH2_400M_050219_1,5744 DOHH2_400M_050219_1,5744,LNEISEETTIQ True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5745 31.229 800.0 410240.0 25 0 29026.0 + 8487 ETDHINQIGY 10 177 595.2778318845335 1188.541110835867 2 595.2781249880791 MULTI CID FTMS 0 0 0 5732 100662.15625 0.0532532503903245 -3 0.1929874420166015 13 Unmodified _ETDHINQIGY_ ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23 85.64151623876279 0.0124443716933876 1 [YG]{[{M(Oxidation (M))|F}D]|MM}{I|L}NQ{I|L}GY 10 3 + 94.703 0.0 0.0 7.968 7.968 84.475 0.0 0.0 0.0 2.04119982655925 16.53212513775344 2.04119982655925 2.04119982655925 0 1.3807196863200843 1.5228787452803376 2.548455006504028 0.3807196863200844 [YG]{[{M(Oxidation (M))|F}D]|MM}{I|L}NQ{I|L}GY;[HD]TE{I|L}NQ{I|L}GY;[YG]{[{M(Oxidation (M))|F}D]|MM}{I|L}GGQ{I|L}GY;[YG]{[{M(Oxidation (M))|F}D]|MM}{I|L}NGA{I|L}GY;[HD]TE{I|L}GGQ{I|L}GY;[HD]TE{I|L}NGA{I|L}GY;[YG]{[{M(Oxidation (M))|F}D]|MM}{I|L}GGGA{I|L}GY;[HD]TE{I|L}GGGA{I|L}GY;[HS]EE{I|L}NQ{I|L}GY;[YG]{[{M(Oxidation (M))|F}D]|MM}{I|L}GNA{I|L}GY 7.968;7.7963;7.7614;7.6799;7.5897;7.5082;7.156;6.9843;6.9549;6.7527 -;-;-;-;-;-;-;-;-;- 11249 1 2.165 238387.0 0.5899999737739563 2357 3386 5732 DOHH2_400M_050219_1,5745 DOHH2_400M_050219_1,5745,ETDHINQIGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5746 31.243 800.0 106850.0 25 0 8547.3 + 29129 QETELSQRI 9 138 552.2875462699703 1102.5605396067406 2 552.2886840701103 MULTI CID FTMS 0 0 0 5732 89296.203125 0.799380604754511 1 -0.0917739868164062 14 Unmodified _QETELSQRI_ ENSG00000025770|ENST00000420993|NCAPH2;nc|ENSG00000025770|Q6IBW4-2|NCAPH2;nc|ENSG00000025770|Q6IBW4-4|NCAPH2 34.93206674587334 0.1032771302489716 1 QETE{I|L}S 6 3 57.066 0.0 0.0 5.1758 0.0 0.0 0.0 412.2293184869751 412.2293184869751 41.58132740201752 0.0 0.0 0.0 0 0.2887254899964357 1.3010299956639813 0.4247425010840047 0.0 + QETE{I|L}S 5.1758 + + 209 + 1 2.165 71245.1 0.550000011920929 2358 3386 5732 DOHH2_400M_050219_1,5746 DOHH2_400M_050219_1,5746,QETELSQRI True True QETELSQRI 31.242807 552.28868407011 580999.9375 5732.0 nc|ENSG00000025770|Q6IBW4-4|NCAPH2;;nc|ENSG00000025770|Q6IBW4-2|NCAPH2;;ENSG00000025770|ENST00000420993|NCAPH2 2.079282641410828 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5747 31.254 563.0 166850.0 25 0 13873.0 -1 EALRMRLQI 9 118 573.3265013963767 0 573.3264648318291 PEAK CID FTMS 0 0 0 5732 113319.1015625 1.0 0 0.0 15 Oxidation (M) _EALRM(Oxidation (M))RLQI_ ENSG00000138829|ENST00000262464|FBN2 14.838274106304384 0.2567717476666951 1 T 1 -1 5.4846 0.0 0.0 0.47915 0.0 0.0 571.3009997636533 469.2649325006469 1040.5659322643005 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 T 0.47915 - 30 + 1 2.165 76311.9 1.0 2359 3386 5732 DOHH2_400M_050219_1,5747 DOHH2_400M_050219_1,5747,EALRMRLQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5749 31.26 119.0 406960.0 25 0 58332.0 + 45292 YSDSLVQKGY 10 75 580.284835747737 1158.555118562274 2 580.2852050662041 MULTI CID FTMS 0 0 0 5748 368239.625 0.3143180157844157 2 -0.1017131805419921 1 Unmodified _YSDSLVQKGY_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 41.95555342248728 0.1369168616057562 1 YSDS{I|L}VQ[KG]Y 10 0 + 73.589 0.0 0.0 6.3518 6.3518 92.868 0.0 0.0 0.0 60.093728280886936 6.690067809585756 6.690067809585756 20.94666892602824 0 0.6677353201839438 2.0 0.4247425010840047 0.4247425010840047 + + YSDS{I|L}VQ[KG]Y;YSDKK{[YD]|[{M(Oxidation (M))|F}M]}{I|L}Q;YSDKK{[WT]|[RM]}[MT];[KQ][HT]V[WE][MT];[KG]A[HT]V[WE][MT];[KQ][WH][{I|L}T]D[MT];{[QV]|[N{I|L}]|[RA]|[KV]}[Y{M(Oxidation (M))|F}]KKD[MT];[KQ]V[HT][WE][MT];[KG]A[WH][{I|L}T]D[MT];{[QV]|[N{I|L}]|[RA]|[KV]}K[HT][WE][MT] 6.3518;4.5438;3.75;1.6658;1.3665;0.81856;0.68824;0.55873;0.51923;0.35624 +;-;-;-;-;-;-;-;-;- + 202 + 1 2.164 39673.2 1.0 2360 3387 5748 DOHH2_400M_050219_1,5749 DOHH2_400M_050219_1,5749,YSDSLVQKGY False True YSDSLVQKGY 31.260471 580.285205066204 14022519.0 5748.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-2|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 11.332182884216309 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5750 31.265 240.0 243220.0 25 0 21118.0 + 31003 RLEVPAEEF 9 96 363.8586629321906 1088.554159396772 3 363.8576537966728 MULTI CID FTMS 0 0 0 5748 149639.671875 0.2198846765601395 2 -0.1017131805419921 2 Unmodified _RLEVPAEEF_ REV__nc|ENSG00000211795|A0A0B4J262|TRAV8-6 8.155526934196011 0.6299788542272896 1 {M(Oxidation (M))|F}E 2 -1 17.959 0.0 0.0 1.6498 0.0 0.0 794.4281138073335 0.0 794.4281138073335 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}E 1.6498 - 17 1 2.164 48849.3 1.0 2361 3387 5748 DOHH2_400M_050219_1,5750 DOHH2_400M_050219_1,5750,RLEVPAEEF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5751 31.266 47.0 1340900.0 25 0 140360.0 19247 LEKDFLPLY 9 98 379.8764252617353 0 379.8763915896416 PEAK CID FTMS 0 0 0 5748 1086319.375 0.7896640934408274 -1 0.0917739868164062 3 Unmodified _LEKDFLPLY_ ENSG00000173786|ENST00000393892|CNP;nc|ENSG00000173786|P09543-2|CNP 16.942295170755138 0.2326366549411506 1 K 1 8 6.9897 0.0 0.0 0.92244 0.0 0.0 61.35275179124557 565.2631070441901 626.6158588354357 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.92244 + + 25 + 1 2.164 51194.0 1.0 2362 3387 5748 DOHH2_400M_050219_1,5751 DOHH2_400M_050219_1,5751,LEKDFLPLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5752 31.268 102.0 491380.0 25 0 37360.0 + 36774 TEEEKNFKAF 10 81 414.8717273229536 1241.5933525690607 3 414.8715698122978 MULTI CID FTMS 0 0 0 5748 478846.65625 0.662221158310823 -2 0.1830520629882812 4 Unmodified _TEEEKNFKAF_ ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13 25.399314129420983 0.3980215340001851 1 EER{[QS]|[NT]}[KA]E 8 5 27.043 0.0 0.0 2.178 0.0 0.0 0.0 281.1129276621445 281.1129276621445 11.969932600358522 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.055462187404089 0.3054621874040891 EER{[QS]|[NT]}[KA]E 2.178 - 252 1 2.164 45842.4 1.0 2363 3387 5748 DOHH2_400M_050219_1,5752 DOHH2_400M_050219_1,5752,TEEEKNFKAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5753 31.271 154.0 449610.0 25 0 31846.0 + 36775 TEEEKNFKAF 10 103 621.8039206913709 1241.5932884495417 2 621.8038818240166 MULTI CID FTMS 0 0 0 5748 394395.5 0.5929964092221842 -1 0.0917739868164062 5 Unmodified _TEEEKNFKAF_ ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13 124.953037156858 0.000220931387527 1 EETEKN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 10 2 + 95.535 0.0 0.0 7.6946 7.6946 89.293 0.0 0.0 0.0 6.945626322600887 16.53212513775344 6.945626322600887 6.945626322600887 0 2.947621246364342 1.6989700043360187 1.9718487496163564 0.0 EETEKN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};{[ET]|[MV]}EEKN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};EETEKGG{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};{[ET]|[MV]}EEKGG{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};{[ET]|[MV]}[HV][YT]{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NKEEA{[ET]|[MV]}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NKEE{[ET]|[MV]}A{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CT]|[{M(Oxidation (M))|F}G]}HN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}KKEEA{[ET]|[MV]}{M(Oxidation (M))|F};[HV]K{M(Oxidation (M))|F}NHDKA{M(Oxidation (M))|F} 7.6946;7.1352;6.9564;6.397;3.7832;3.5797;3.5443;3.2078;3.1955;3.1714 -;+;-;-;-;-;-;-;-;- + 1662 1 2.164 56254.5 1.0 2364 3387 5748 DOHH2_400M_050219_1,5753 DOHH2_400M_050219_1,5753,TEEEKNFKAF True True TEEEKNFKAF 31.27145 621.803881824017 8077902.5 5748.0 ENST00000399461.8_1_16:89627605-89629447:+|nuORF;;ENSG00000167526|ENST00000311528|RPL13;;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;;nc|ENSG00000167526|P26373-2|RPL13;;ENST00000484610.5_1_16:89627907-89629447:+|nuORF 8.36097002029419 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5754 31.277 309.0 201560.0 25 0 12203.0 + 36913 TESPTNPQF 9 100 510.7354614306391 1019.4563699280782 2 510.7366515994072 MULTI CID FTMS 0 0 0 5748 165124.359375 0.7306471437656157 -2 0.1830520629882812 6 Unmodified _TESPTNPQF_ ENSG00000047346|ENST00000619572|ATOSA;ENST00000534964.6_1_15:52874353-52879255:-|nuORF;ENST00000568871.1_1_15:52874353-52877153:-|nuORF;nc|ENSG00000047346|Q32MH5-3|ATOSA 37.97399986684836 0.0865783450051559 1 [QP]SS{[ET]|[MV]}PQ{M(Oxidation (M))|F} 9 4 + 56.321 0.0 0.0 5.5246 5.5246 84.467 0.0 0.0 0.0 10.048927884701882 9.889917747712644 9.889917747712644 8.454387282529794 0 0.7742275032520141 1.0969100130080565 1.274227503252014 0.6505149978319906 [QP]SS{[ET]|[MV]}PQ{M(Oxidation (M))|F};[QP]S[WM]PQ{M(Oxidation (M))|F};[PS]QS{[ET]|[MV]}PQ{M(Oxidation (M))|F};[PS]Q[WM]PQ{M(Oxidation (M))|F};[PS]TN{[ET]|[MV]}PQ{M(Oxidation (M))|F};[VG]EN{[ET]|[MV]}PQ{M(Oxidation (M))|F};[VG]QD{[ET]|[MV]}PQ{M(Oxidation (M))|F};[PS][AG]S{[ET]|[MV]}PQ{M(Oxidation (M))|F};[QP]S[TP]{[ES]|[DT]|[{I|L}C]}Q{M(Oxidation (M))|F};[PS][AG][WM]PQ{M(Oxidation (M))|F} 5.5246;4.6953;4.5389;3.7096;3.4715;3.1602;3.0652;2.9976;2.4868;2.482 -;-;-;-;-;-;-;-;-;- 433 1 2.164 58223.9 1.0 2365 3387 5748 DOHH2_400M_050219_1,5754 DOHH2_400M_050219_1,5754,TESPTNPQF True True TESPTNPQF 31.277088 510.736651599407 1348505.125 5748.0 nc|ENSG00000047346|Q32MH5-3|ATOSA;;ENST00000568871.1_1_15:52874353-52877153:-|nuORF;;ENST00000534964.6_1_15:52874353-52879255:-|nuORF;;ENSG00000047346|ENST00000619572|ATOSA 5.615835984547933 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5755 31.291 800.0 206300.0 25 0 17531.0 44198 YLFYCKNCRFY 11 110 760.3443098740572 1518.6740668149143 2 760.3452636599541 MULTI CID FTMS 0 0 0 5748 154441.484375 0.593447461951807 -2 0.1830520629882812 7 Unmodified _YLFYCKNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 1 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F}Y 14 12 + 88.17 0.0 0.0 5.8057 5.8057 83.141 0.0 0.0 0.0 5.501048161088335 10.7521226932964 5.501048161088335 5.501048161088335 0 1.0682503180159344 0.8239087409443188 0.3054621874040891 1.4802046884880935 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}AG[HV]EAQQNA{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}PHDEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQQGGA{M(Oxidation (M))|F}Y 5.8057;5.4435;5.2098;5.2098;5.2098;5.1655;5.1039;4.8755;4.8461;4.8461 -;-;-;-;-;-;-;-;-;- 1644 1 2.164 118097.5 0.6899999976158142 2366 3387 5748 DOHH2_400M_050219_1,5755 DOHH2_400M_050219_1,5755,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5756 31.294 179.0 366750.0 25 0 58349.0 -1 LARKAGELMSL 11 89 402.2302248427079 1203.6688451283237 3 402.2303954958916 MULTI CID FTMS 0 0 0 5748 132678.6875 0.5526592963018767 -3 0.2588768005371094 8 Oxidation (M) _LARKAGELM(Oxidation (M))SL_ ENST00000389698.7_1_14:36278134-36278200:-|nuORF 3.5926746625661337 0.8581974622983616 1 {I|L}A 2 -1 17.959 0.0 0.0 1.492 0.0 0.0 0.0 1016.5228115982304 1016.5228115982304 5.969100130080562 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A 1.492 + + 19 + 1 2.164 55195.2 1.0 2367 3387 5748 DOHH2_400M_050219_1,5756 DOHH2_400M_050219_1,5756,LARKAGELMSL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5757 31.308 800.0 486550.0 25 0 55251.0 + 45311 GEAAVGDRW 9 167 481.18249705809694 960.350441182994 2 481.1824218630791 MULTI CID FTMS 0 0 0 5748 167195.875 0.0587996487056328 -4 0.2847614288330078 9 Unmodified _YSGDYMEP_ ENST00000422760.1_1_7:117824319-117824580:+|nuORF 24.67388899826682 0.525179942228231 1 SGDY 4 4 43.999 0.0 0.0 4.5815 0.0 0.0 0.0 535.1840903087871 535.1840903087871 11.819273492132076 0.0 0.0 0.0 0 0.8494850021680094 0.958607314841775 0.0 0.0 + SGDY 4.5815 + + 707 + 1 2.164 298501.2 0.6299999952316284 2368 3387 5748 DOHH2_400M_050219_1,5757 DOHH2_400M_050219_1,5757,YSGDYMEP False False GEAAVGDRW 31.308215 481.182421863079 550176.6875 5748.0 ENST00000422760.1_1_7:117824319-117824580:+|nuORF 0.4072228589405616 2.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 5759 31.325 800.0 37277.0 25 0 5643.9 -1 0 35 1100.4574479978528 3298.350514593759 3 1100.791430652142 MULTI CID FTMS 0 0 0 5758 69750.5546875 0.636710398557714 2 -0.094573974609375 1 1 S{I|L} 2 -1 4.6927 0.0 0.0 0.14228 0.0 0.0 2557.0216704548898 538.1931856744749 3095.2148561293648 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S{I|L} 0.14228 - 5 + 1 2.164 31884.8 0.4699999988079071 2369 3388 5758 DOHH2_400M_050219_1,5759 DOHH2_400M_050219_1,5759, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5760 31.338 800.0 231450.0 25 0 26585.0 -1 YLMKFYCRCFQ 11 105 808.3610634601715 1614.707573987143 2 808.3609496951103 MULTI CID FTMS 0 0 0 5758 184681.265625 1.0 0 0.0 2 2 Carbamidomethyl (C) _YLMKFYC(Carbamidomethyl (C))RC(Carbamidomethyl (C))FQ_ ENST00000599501.6_3_2:98292334-98305447:+|nuORF 1.3295316138638542 0.8688751186870782 1 {M(Oxidation (M))|F}ANQQAE[HA]YQ 11 -1 85.069 0.0 0.0 5.2684 0.0 0.0 309.1325459024602 0.0 309.1325459024602 0.0 73.64185475805752 0.0 0.0 0 0.4247425010840047 0.0 0.0 2.309894379144197 {M(Oxidation (M))|F}ANQQAE[HA]YQ 5.2684 - 5351 + 1 2.164 132328.5 0.7300000190734863 2370 3388 5758 DOHH2_400M_050219_1,5760 DOHH2_400M_050219_1,5760,YLMKFYCRCFQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5761 31.35 650.0 261980.0 25 0 29323.0 + 7548 EIGYRNSL 8 157 476.2483773411997 950.4822017491996 2 476.2493774294853 MULTI CID FTMS 0 0 0 5758 100604.015625 0.9089638791489392 7 -0.5667762756347656 3 Unmodified _EIGYRNSL_ ENSG00000112742|ENST00000369798|TTK;nc|ENSG00000112742|P33981-2|TTK 25.399314129420983 0.5099049743284904 1 {[QN]|[E{I|L}]|[KN]}GY 4 4 28.787 0.0 0.0 3.0286 0.0 0.0 0.0 485.2490328424438 485.2490328424438 14.556364969973565 0.0 0.0 0.0 0 0.25 1.6989700043360187 0.0 0.0 + {[QN]|[E{I|L}]|[KN]}GY 3.0286 + + 298 + 1 2.164 131937.2 1.0 2371 3388 5758 DOHH2_400M_050219_1,5761 DOHH2_400M_050219_1,5761,EIGYRNSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5762 31.356 357.0 229490.0 25 0 15340.0 39794 VERMIAILS 9 111 516.3016670720928 0 516.3016845583916 PEAK CID FTMS 0 0 0 5758 231504.796875 0.4106436028839355 3 -0.1731452941894531 4 Unmodified _VERMIAILS_ ENSG00000185418|ENST00000335968|TARS3;nc|ENSG00000185418|A2RTX5-2|TARS3 7.289230182591677 0.3433663536648894 1 R 1 8 2.7642 0.0 0.0 0.26822 0.0 0.0 377.2079961541479 494.2589205377563 871.4669166919042 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.26822 + + 2 + 1 2.164 66717.5 1.0 2372 3388 5758 DOHH2_400M_050219_1,5762 DOHH2_400M_050219_1,5762,VERMIAILS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5764 31.361 29.0 1622000.0 25 0 97698.0 + 8883 FAEHNDLQY 9 70 568.754014230464 1135.493475527728 2 568.7542602419853 MULTI CID FTMS 0 0 0 5763 1478340.0 0.5627286748998512 2 -0.1254119873046875 1 Unmodified _FAEHNDLQY_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 29.081581746732265 0.1611639662936252 1 [HN]DEA{M(Oxidation (M))|F}{I|L}QY 9 6 + 29.464 0.0 0.0 2.5949 2.5949 70.507 0.0 0.0 0.0 3.010840447343387 13.072420927871992 3.010840447343387 3.0102999566398125 0 0.7429928190999391 0.0 0.3494850021680094 0.0 [HN]DEA{M(Oxidation (M))|F}{I|L}QY;[HN]DEA{I|L}{M(Oxidation (M))|F}QY;[{M(Oxidation (M))|F}V][HT]ND{I|L}QY;[HN]D{I|L}{[CP]|[EA]}{M(Oxidation (M))|F}QY;[{M(Oxidation (M))|F}V][HT]GGD{I|L}QY 2.5949;2.3298;1.4761;0.86057;0.6652 -;-;-;-;- 135 1 2.164 39456.2 1.0 2373 3389 5763 DOHH2_400M_050219_1,5764 DOHH2_400M_050219_1,5764,FAEHNDLQY False True FAEHNDLQY 31.360618 568.754260241985 27961982.0 5763.0 ENSG00000180574|ENST00000538173|EIF2S3B;;ENSG00000130741|ENST00000253039|EIF2S3;;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 8.549028555552164 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5765 31.363 101.0 564410.0 25 0 47945.0 + 36793 TEHPKINEW 9 100 577.2853064683261 1152.556060003452 2 577.2851440310478 MULTI CID FTMS 0 0 0 5763 468823.15625 0.5044728324923963 -2 0.1017131805419921 2 Unmodified _TEHPKINEW_ ENSG00000197102|ENST00000360184|DYNC1H1 63.960520009940105 0.0238892913700936 1 {[ET]|[MV]}HP{I|L}KNEW 9 2 + 45.556 0.0 0.0 3.9526 3.9526 77.178 0.0 0.0 0.0 6.237125054200227 9.208187539523747 6.237125054200227 6.237125054200227 0 1.8182503180159344 0.0 0.7302046884880937 0.5 {[ET]|[MV]}HP{I|L}KNEW;{[CT]|[{M(Oxidation (M))|F}G]}YP{I|L}KNEW;{[ET]|[MV]}HP{I|L}KGGEW;[KP]{I|L}NEHTEW;{[CT]|[{M(Oxidation (M))|F}G]}YP{I|L}KGGEW;{[CT]|[{M(Oxidation (M))|F}G]}ENK{I|L}PWY;[KP]{I|L}NT[MT]H[DP];{[DS]|[MA]|[CV]|TT}[H{I|L}][HV]PH[DP];{[DS]|[MA]|[CV]|TT}[H{I|L}][HV]PYW;{[CT]|[{M(Oxidation (M))|F}G]}ENK{I|L}P[DP]H 3.9526;3.4115;3.1537;2.6723;2.6125;2.4713;2.4388;2.3558;2.3292;2.3059 -;-;-;-;-;-;-;-;-;- 428 1 2.164 46787.5 1.0 2374 3389 5763 DOHH2_400M_050219_1,5765 DOHH2_400M_050219_1,5765,TEHPKINEW True True TEHPKINEW 31.362795 577.285144031048 16488882.5 5763.0 ENSG00000197102|ENST00000360184|DYNC1H1 7.905096848805745 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5766 31.368 278.0 285900.0 25 0 17948.0 + 33396 SGSFYYSI 8 112 462.20912225163926 922.4036915700784 2 462.2090942263603 MULTI CID FTMS 0 0 0 5763 182470.8125 0.5198413980842382 -2 0.1017131805419921 3 Unmodified _SGSFYYSI_ REV__ENSG00000181104|ENST00000319211|F2R 19.438996006549623 0.6237395211498085 1 [HM]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}SY 7 -1 + 25.476 0.0 0.0 2.7619 2.7619 71.879 0.0 0.0 0.0 0.7694694512639444 3.789850105233299 0.7694694512639444 3.789850105233299 0 0.0 0.0 0.25 0.0 [HM]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}SY;[HM]{I|L}[YC(Carbamidomethyl (C))]S{I|L};[HM]{I|L}[YQ][MT];{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}N{[TV]|[{I|L}S]}E;[HM][CS][{M(Oxidation (M))|F}V]S{I|L};[HM][DG]D[HV]{I|L};{M(Oxidation (M))|F}{[TV]|[{I|L}S]}N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W;[HM][DG]D{I|L}[HV];[NP]A[HC][RP]E 2.7619;2.351;0.5687;0.53536;0.30495;0.21864;0.095462;0.083193;0.045855 -;-;-;-;-;-;-;-;- 463 + 1 2.164 68234.8 1.0 2375 3389 5763 DOHH2_400M_050219_1,5766 DOHH2_400M_050219_1,5766,SGSFYYSI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5767 31.382 800.0 232480.0 25 0 32711.0 -1 INNCMDYEPD 10 153 635.7413706826909 1269.4681884321817 2 635.7422363162041 MULTI CID FTMS 0 0 0 5763 137730.6875 0.2081892974373726 -2 0.1017131805419921 4 Carbamidomethyl (C) _INNC(Carbamidomethyl (C))MDYEPD_ ENSG00000096968|ENST00000381652|JAK2 1.6526216038709556 0.7189921496796233 1 EEK{M(Oxidation (M))|F}{I|L}R 6 -1 39.931 0.0 0.0 3.1455 0.0 0.0 449.0220586220883 0.0 449.0220586220883 0.0 27.09981506778199 0.0 0.0 0 0.0 0.0 0.6643943297944485 0.1171302707394362 EEK{M(Oxidation (M))|F}{I|L}R 3.1455 - 703 + 1 2.164 140603.5 0.6700000166893005 2376 3389 5763 DOHH2_400M_050219_1,5767 DOHH2_400M_050219_1,5767,INNCMDYEPD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5768 31.387 259.0 224570.0 25 0 19029.0 + 23329 LTEIKGSVY 9 106 505.2820158450168 1008.5494787568337 2 505.2840148806572 MULTI CID FTMS 0 0 0 5763 126746.9375 1.0 0 0.0 5 Unmodified _LTAQTYLSI_ ENSG00000153975|ENST00000368576|ZUP1;ENST00000471919.1_1_6:116981518-116989864:-|nuORF 29.081581746732265 0.1611639662936252 1 {I|L}TE{I|L} 4 6 49.24 0.0 0.0 4.8823 0.0 0.0 0.0 549.2689913385374 549.2689913385374 33.75569708000178 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}TE{I|L} 4.8823 - 60 + 1 2.164 49648.3 1.0 2377 3389 5763 DOHH2_400M_050219_1,5768 DOHH2_400M_050219_1,5768,LTAQTYLSI False False LTEIKGSVY 31.386551 505.284014880657 471094.03125 5763.0 ENSG00000153975|ENST00000368576|ZUP1;;ENST00000471919.1_1_6:116981518-116989864:-|nuORF 5.993910471598308 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5769 31.4 800.0 122150.0 25 0 9063.2 + -1 KKCCYYTLENE 11 106 754.3327716056186 1506.6509902780372 2 754.3343383669853 MULTI CID FTMS 0 0 0 5763 86882.8515625 0.724610669357909 -2 0.1017131805419921 6 2 Carbamidomethyl (C) _KKC(Carbamidomethyl (C))C(Carbamidomethyl (C))YYTLENE_ REV__ENSG00000085063|ENST00000642928|CD59;REV__nc|ENSG00000284969|P13987-2|CD59 7.608950283845883 0.8392484121837455 1 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 56.846 0.0 0.0 3.773 0.0 0.0 493.2287770001969 0.0 493.2287770001969 0.0 45.2524439246897 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.8494850021680094 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.773 - 411 1 2.164 72641.9 0.550000011920929 2378 3389 5763 DOHH2_400M_050219_1,5769 DOHH2_400M_050219_1,5769,KKCCYYTLENE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5770 31.403 130.0 1249300.0 25 0 94378.0 + 33387 SGPNGYTSY 9 136 473.1999105568063 944.3852681804126 2 473.1999999880791 MULTI CID FTMS 0 0 0 5763 364669.875 0.1654909950962378 -2 0.1017131805419921 7 Unmodified _SGPNGYTSY_ REV__ENSG00000270647|ENST00000605844|TAF15;REV__nc|ENSG00000270647|Q92804-2|TAF15 29.081581746732265 0.1611639662936252 1 [SG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TDGSY 9 -1 + 53.323 0.0 0.0 5.6463 5.6463 80.868 0.0 0.0 0.0 8.88694117108745 8.88694117108745 8.88694117108745 3.779769407903757 0 2.0114393726401687 1.3010299956639813 0.6307196863200843 0.0 [SG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TDGSY;[SG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}C(Carbamidomethyl (C)){I|L}SY;[SG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[CG]{I|L}SY;[SG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T[SG]DY;[SG]D{[QV]|[N{I|L}]|[RA]|[KV]}[YN]Y;[SG]D[HM][HV]Y;{[CT]|[{M(Oxidation (M))|F}G]}[KG]DDGSY;[HM]GD[HV]SY;[SG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Q[MT]Y;{[CT]|[{M(Oxidation (M))|F}G]}{[NV]|[RG]}SDGSY 5.6463;5.2461;4.2653;4.187;3.7235;3.6288;3.3873;3.2881;2.9176;2.7982 -;-;-;-;-;-;-;-;-;- 751 1 2.164 131283.7 1.0 2379 3389 5763 DOHH2_400M_050219_1,5770 DOHH2_400M_050219_1,5770,SGPNGYTSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5772 31.407 77.0 871420.0 25 0 47573.0 + -1 LRKMLTTV 8 94 489.2923863070199 976.5702196808398 2 489.2924377322197 MULTI CID FTMS 0 0 0 5771 781275.5 0.5880426880595573 3 -0.3001518249511719 1 Oxidation (M) _LRKM(Oxidation (M))LTTV_ REV__ENSG00000164076|ENST00000477224|CAMKV;REV__ENST00000475665.5_1_3:49896753-49898557:-|nuORF;REV__nc|ENSG00000164076|Q8NCB2-2|CAMKV;REV__nc|ENSG00000164076|Q8NCB2-3|CAMKV 24.67388899826682 0.525179942228231 1 [R{I|L}]PPP[TP]TV 9 -1 + 44.019 0.0 0.0 4.5075 4.5075 84.904 0.0 0.0 0.0 14.704999916446797 15.94885054058146 14.704999916446797 13.266062568876716 0 0.809894379144197 1.154901959985743 0.4247425010840047 0.0 [R{I|L}]PPP[TP]TV;[R{I|L}]PPP{[VA]|[{I|L}G]}EV;YV{I|L}{I|L}[RN]TV;[R{I|L}][YK][TP]TV;[R{I|L}][YK]{[VA]|[{I|L}G]}EV 4.5075;3.149;2.681;2.2729;0.91443 -;-;-;-;- 80 1 2.164 56822.5 1.0 2380 3390 5771 DOHH2_400M_050219_1,5772 DOHH2_400M_050219_1,5772,LRKMLTTV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5773 31.412 229.0 312830.0 25 0 165470.0 -1 VGFCEMQKY 9 65 581.2572959828311 0 581.2574951052666 PEAK CID FTMS 0 0 0 5771 384682.6875 0.9431768309352384 -1 0.0468406677246093 2 Carbamidomethyl (C) _VGFC(Carbamidomethyl (C))EMQKY_ ENST00000506530.5_1_4:1323389-1323932:+|nuORF 2.302733041254933 0.3444685223463735 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.164 62118.7 1.0 2381 3390 5771 DOHH2_400M_050219_1,5773 DOHH2_400M_050219_1,5773,VGFCEMQKY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5774 31.413 42.0 1130000.0 25 0 92921.0 + 708 AEPARPDITY 10 60 566.7848087042884 1131.5550644753766 2 566.7854492068291 MULTI CID FTMS 0 0 0 5771 1077272.5 1.0 0 0.0 3 Unmodified _AEPARPDITY_ ENSG00000106153|ENST00000395422|CHCHD2;ENST00000473095.1_1_7:56170554-56174106:-|nuORF 23.78978130925829 0.4341852049148378 1 TY 2 8 26.766 0.0 0.0 2.3654 0.0 0.0 849.4329464107267 0.0 849.4329464107267 0.0 13.566147098514705 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 + TY 2.3654 + + 34 + 1 2.164 43814.1 1.0 2382 3390 5771 DOHH2_400M_050219_1,5774 DOHH2_400M_050219_1,5774,AEPARPDITY False True AEPARPDITY 31.412974 566.785449206829 9828481.0 5771.0 ENSG00000106153|ENST00000395422|CHCHD2;;ENST00000473095.1_1_7:56170554-56174106:-|nuORF 3.7076536814371743 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5775 31.415 66.0 928380.0 25 0 153140.0 + 36795 TEHPKINEW 9 82 385.1936221967662 1152.5590371904989 3 385.1931335330009 MULTI CID FTMS 0 0 0 5771 735101.125 1.0 0 0.0 4 Unmodified _TEHPKINEW_ ENSG00000197102|ENST00000360184|DYNC1H1 12.531546534597751 0.4974689918368763 1 W 1 8 13.099 0.0 0.0 1.1365 0.0 0.0 948.468275937372 0.0 948.468275937372 0.0 2.808487663269968 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 1.1365 + + 39 + 1 2.164 54776.9 1.0 2383 3390 5771 DOHH2_400M_050219_1,5775 DOHH2_400M_050219_1,5775,TEHPKINEW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5776 31.418 181.0 372840.0 25 0 20695.0 + 36947 TEWSEAANQDQ 11 88 426.8462107080243 1277.5168027242728 3 426.8461486697197 MULTI CID FTMS 0 0 0 5771 334987.28125 1.0 0 0.0 5 Unmodified _TEWSEAANQDQ_ REV__ENSG00000136874|ENST00000259400|STX17 24.99096001346401 0.505407273373304 1 TE{[CT]|[{M(Oxidation (M))|F}G]}K 5 -1 49.935 0.0 0.0 3.9088 0.0 0.0 0.0 712.2205869612767 712.2205869612767 32.37128737770496 0.0 0.0 0.0 0 0.5242275032520141 1.3979400086720375 0.8494850021680094 0.0 TE{[CT]|[{M(Oxidation (M))|F}G]}K 3.9088 - 215 + 1 2.164 58375.6 1.0 2384 3390 5771 DOHH2_400M_050219_1,5776 DOHH2_400M_050219_1,5776,TEWSEAANQDQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5777 31.422 184.0 445190.0 25 0 34825.0 13499 HMFTKEEL 8 114 517.7528015654677 1033.4910501977354 2 517.7525512576103 MULTI CID FTMS 0 0 0 5771 223651.0625 0.7371438694719364 -1 0.0468406677246093 6 Unmodified _HMFTKEEL_ ENSG00000143106|ENST00000271308|PSMA5;nc|ENSG00000143106|P28066-2|PSMA5 58.6788170122104 0.1149141431586871 1 HM 2 6 32.268 0.0 0.0 3.1222 0.0 0.0 0.0 762.3725679986936 762.3725679986936 1.870799197279915 0.0 0.0 0.0 0 0.6861818737241735 1.2218487496163564 0.0 0.0 + HM 3.1222 + + 357 + 1 2.164 67347.1 1.0 2385 3390 5771 DOHH2_400M_050219_1,5777 DOHH2_400M_050219_1,5777,HMFTKEEL True True MSYERSMM 31.421614 517.75255125761 706324.5 5771.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-9|SON 2.84537943204244 2.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5778 31.426 253.0 323240.0 25 0 18434.0 + 30476 REATGKITF 9 108 511.7847930062782 1021.5550330793563 2 511.7850219607353 MULTI CID FTMS 0 0 0 5771 200688.234375 0.6989444801545988 -1 0.0468406677246093 7 Unmodified _REATGKITF_ ENSG00000153140|ENST00000283122|CETN3 31.26834338654808 0.1333407332142048 1 {[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}GK{I|L}T{M(Oxidation (M))|F} 9 2 + 62.374 0.0 0.0 6.1058 6.1058 79.015 0.0 0.0 0.0 1.249387366082999 16.478174818886373 1.249387366082999 1.249387366082999 0 0.8807196863200843 1.6989700043360187 0.4247425010840047 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}GK{I|L}T{M(Oxidation (M))|F};[VS][RD]GK{I|L}T{M(Oxidation (M))|F};[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}GK{I|L}T{M(Oxidation (M))|F};[{I|L}T]{[WN]|[YH]}K{I|L}T{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}GKT{I|L}{M(Oxidation (M))|F};[VS][RD]GKT{I|L}{M(Oxidation (M))|F};[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}GKT{I|L}{M(Oxidation (M))|F};[{I|L}T]{[WN]|[YH]}KT{I|L}{M(Oxidation (M))|F};[{I|L}A]{[WS]|[C(Carbamidomethyl (C)){I|L}]}GK{I|L}T{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}[RV]GK{I|L}T{M(Oxidation (M))|F} 6.1058;5.9835;5.9334;5.8886;4.7809;4.6586;4.6086;4.5638;4.4427;4.0824 -;-;-;-;-;-;-;-;-;- 484 1 2.164 70455.2 1.0 2386 3390 5771 DOHH2_400M_050219_1,5778 DOHH2_400M_050219_1,5778,REATGKITF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5779 31.44 800.0 118620.0 25 0 7729.7 + -1 ISDEHGIDPTGTY 13 126 702.8168487076679 1403.6191444821357 2 702.8168212771416 MULTI CID FTMS 0 0 0 5771 129208.515625 1.0 0 0.0 8 Carbamidomethyl (C) _IFERWEC(Carbamidomethyl (C))TTY_ ENSG00000196230|ENST00000327892|TUBB;ENSG00000104833|ENST00000264071|TUBB4A;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;ENSG00000188229|ENST00000340384|TUBB4B;ENST00000518096.1_1_8:30209523-30210210:+|nuORF 21.53697664764585 0.484802182336468 1 [YT]GTES{I|L}DPTGTY 13 -1 + 104.08 0.0 0.0 7.4149 7.4149 83.162 0.0 0.0 0.0 1.7609125905568137 10.831694494490293 1.7609125905568137 1.7609125905568137 0 1.4258337024346173 1.0969100130080565 2.440614065464281 0.0 [YT]GTES{I|L}DPTGTY;{[SA]|[TG]}YTES{I|L}DPTGTY;[YT]G{M(Oxidation (M))|F}{I|L}G{I|L}DPTGTY;[YT]GTESD{I|L}PTGTY;{[SA]|[TG]}Y{M(Oxidation (M))|F}{I|L}G{I|L}DPTGTY;{[SA]|[TG]}YTESD{I|L}PTGTY;[YT]GTP{M(Oxidation (M))|F}S{I|L}PTGTY;{[SA]|[TG]}YTP{M(Oxidation (M))|F}S{I|L}PTGTY;[YT]G{M(Oxidation (M))|F}{I|L}GD{I|L}PTGTY;[YT]GTES{I|L}DPGTTY 7.4149;7.2895;7.0192;6.9547;6.8937;6.8293;6.7766;6.6512;6.559;6.504 -;-;-;-;-;-;-;-;-;- 12169 1 2.164 72956.7 0.6700000166893005 2387 3390 5771 DOHH2_400M_050219_1,5779 DOHH2_400M_050219_1,5779,IFERWECTTY False False ISDEHGIDPTGTY 31.440157 702.816821277142 743979.375 5771.0 ENSG00000196230|ENST00000327892|TUBB;;ENSG00000104833|ENST00000264071|TUBB4A;;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;;ENSG00000188229|ENST00000340384|TUBB4B;;ENST00000518096.1_1_8:30209523-30210210:+|nuORF 8.209721406300863 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5780 31.454 800.0 197630.0 25 0 22049.0 + 9039 FEDENGQRW 9 154 590.7549726369352 0 590.7550536990166 PEAK CID FTMS 0 0 0 5771 107864.4296875 0.5587699171338446 -1 0.0468406677246093 9 Unmodified _FEDENGQRW_ ENSG00000123983|ENST00000357430|ACSL3;ENST00000474422.1_1_2:223795406-223797999:+|nuORF 99.79894945604345 0.0288293043136998 1 EDENGQ 6 3 64.29 0.0 0.0 5.4506 0.0 0.0 147.0673527066793 357.16828333072505 504.23563603740433 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.2302046884880935 1.610924374808178 + EDENGQ 5.4506 + + 326 + 1 2.164 119347.0 0.6299999952316284 2388 3390 5771 DOHH2_400M_050219_1,5780 DOHH2_400M_050219_1,5780,FEDENGQRW True True FEDENGQRW 31.453991 590.755053699017 1362118.75 5771.0 ENST00000474422.1_1_2:223795406-223797999:+|nuORF;;ENSG00000123983|ENST00000357430|ACSL3 8.152853965759277 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5781 31.468 800.0 176120.0 25 0 19351.0 23476 LTHPLAYSHG 10 133 548.2839436695548 1094.5533344059097 2 548.2829467654228 MULTI CID FTMS 0 0 0 5771 88837.859375 0.6450358105969416 -2 0.094573974609375 10 Unmodified _LTHPLAYSHG_ ENST00000275767.3_1_7:134849612-134849717:+|nuORF 19.62595529434964 0.5182375435722777 1 {I|L}THPPEH 7 5 56.067 0.0 0.0 5.1224 0.0 0.0 0.0 280.13007532291255 280.13007532291255 42.65777723600253 0.0 0.0 0.0 0 2.142159058960253 0.0 0.4247425010840047 0.0 {I|L}THPPEH 5.1224 - 492 + 1 2.164 110736.5 0.5699999928474426 2389 3390 5771 DOHH2_400M_050219_1,5781 DOHH2_400M_050219_1,5781,LTHPLAYSHG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5782 31.482 800.0 129330.0 25 0 9776.6 + 6909 EEFEYQRSY 9 106 625.7697717414143 1249.5249905496285 2 626.2723876833916 MULTI CID FTMS 0 0 0 5771 114179.125 1.0 0 0.0 11 Unmodified _EEFEYQRSY_ ENSG00000035499|ENST00000265036|DEPDC1B 60.07390631473393 0.0260411565414776 1 EE{M(Oxidation (M))|F}EYQRSY 9 0 + 75.728 0.0 0.0 6.0606 6.0606 88.21 0.0 0.0 0.0 60.41205499938207 13.89125264520178 13.89125264520178 9.208187539523747 0 0.3807196863200844 1.6989700043360187 0.3807196863200844 1.274227503252014 + + EE{M(Oxidation (M))|F}EYQRSY;EE{M(Oxidation (M))|F}EY[AG]RSY;EE{M(Oxidation (M))|F}EY[QA][TA]Y;EE{M(Oxidation (M))|F}E[HM]R{[WS]|[C(Carbamidomethyl (C)){I|L}]};EE{M(Oxidation (M))|F}E{[RE]|[WV]}{[{M(Oxidation (M))|F}H]|[RQ]}Q;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YN]YQRSY;[{M(Oxidation (M))|F}E]Y{I|L}YE{M(Oxidation (M))|F}[HC];[AG]YR[HM]E{M(Oxidation (M))|F}[HC];EE{M(Oxidation (M))|F}E{[RE]|[WV]}[VS][EP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YN]Y[AG]RSY 6.0606;5.3236;4.7403;3.2521;2.9036;2.7328;2.6552;2.3187;2.2072;1.9958 +;-;-;-;-;-;-;-;-;- + 305 + 1 2.164 83377.4 0.6700000166893005 2390 3390 5771 DOHH2_400M_050219_1,5782 DOHH2_400M_050219_1,5782,EEFEYQRSY True True EEFEYQRSY 31.481663 626.272387683392 820431.9375 5771.0 ENSG00000035499|ENST00000265036|DEPDC1B 6.672359148661296 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5784 31.487 64.0 589780.0 25 0 50034.0 + 8488 ETDHINQIGY 10 63 595.2778318845335 1188.541110835867 2 595.2780639529228 MULTI CID FTMS 0 0 0 5783 737945.875 0.3903951387479062 2 -0.2215805053710937 1 Unmodified _ETDHINQIGY_ ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23 47.74868867922204 0.0933642699623533 1 {I|L}QN{I|L}[WD]Y 7 8 50.991 0.0 0.0 4.2902 0.0 0.0 238.0938314925391 0.0 238.0938314925391 0.0 39.53742884314849 0.0 0.0 0 0.5 0.0 1.6549471895720984 0.4247425010840047 {I|L}QN{I|L}[WD]Y 4.2902 - 71 + 1 2.152 36133.5 1.0 2391 3391 5783 DOHH2_400M_050219_1,5784 DOHH2_400M_050219_1,5784,ETDHINQIGY True True ETDHINQIGY 31.48667 595.278063952923 20945322.0 5783.0 nc|ENSG00000112282|Q9ULK4-2|MED23;;nc|ENSG00000112282|Q9ULK4-3|MED23;;nc|ENSG00000112282|Q9ULK4-5|MED23;;ENSG00000112282|ENST00000368068|MED23;;nc|ENSG00000112282|Q9ULK4-4|MED23 7.597979545593262 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5785 31.489 87.0 616950.0 25 0 46553.0 + 31841 RTEPFQDGY 9 75 556.7537239400515 1111.4928949469029 2 556.7532836794853 MULTI CID FTMS 0 0 0 5783 257938.828125 0.1473717313693202 3 -0.3452472686767578 2 Unmodified _RTEPFQDGY_ ENSG00000164543|ENST00000319357|STK17A 27.22323531849824 0.1848086127304535 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}QDGY 9 0 + 56.119 0.0 0.0 5.049 5.049 84.512 0.0 0.0 0.0 3.65279269351241 39.6657624451305 3.65279269351241 9.208187539523747 0 0.5 0.0 0.0 0.3494850021680094 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}QDGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}[AG]DGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}{[WN]|[YH]}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP[NG]Y[{M(Oxidation (M))|F}E];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DP{[QG]|[NA]}Y[{M(Oxidation (M))|F}E];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{[CP]|[EA]}Y 5.049;4.2206;2.2858;1.7233;1.0232;0.36912 +;-;-;-;-;- + 129 1 2.152 46199.5 1.0 2392 3391 5783 DOHH2_400M_050219_1,5785 DOHH2_400M_050219_1,5785,RTEPFQDGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5786 31.49 82.0 808760.0 25 0 102210.0 -1 0 87 413.21540527839545 412.20812881179546 1 413.2187377810478 MULTI CID FTMS 0 0 0 5783 476882.1875 1.0 0 0.0 3 1 Y 1 -1 11.259 0.0 0.0 2.7314 0.0 0.0 231.1332366992939 0.0 231.1332366992939 0.0 4.269359821608809 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.7314 - 21 + 1 2.152 58895.8 1.0 2393 3391 5783 DOHH2_400M_050219_1,5786 DOHH2_400M_050219_1,5786, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5787 31.493 136.0 617220.0 25 0 79828.0 + 13881 HVPEHAVVL 9 88 500.7823168311523 999.5500807291046 2 500.7826110720634 MULTI CID FTMS 0 0 0 5783 447841.71875 0.337293039620238 6 -0.4333858489990234 4 Unmodified _HVPEHAVVL_ ENSG00000169710|ENST00000306749|FASN 26.88365393820708 0.1891292719743517 1 [HV]A[EP]HVV{I|L} 9 2 + 45.797 0.0 0.0 4.5818 4.5818 55.193 0.0 0.0 0.0 17.0193091132105 15.607639219135748 15.607639219135748 0.0 0 0.868415180652539 2.0 0.0 0.0 [HV]A[EP]HVV{I|L};[HV][EP]HAVV{I|L};[HV][EP]AHVV{I|L};[HV]A[EP]VHV{I|L};[HV][EP]AVHV{I|L};[HV][TP][TP]HV{I|L};[HV][TP]H[TP]V{I|L};{[VA]|[{I|L}G]}H[EP]HVV{I|L};{[VA]|[{I|L}G]}H[EP]VHV{I|L} 4.5818;4.5818;4.2806;4.1044;3.8033;2.3535;2.3535;1.3545;0.87717 -;+;-;-;-;-;-;-;- + 263 1 2.152 66964.1 1.0 2394 3391 5783 DOHH2_400M_050219_1,5787 DOHH2_400M_050219_1,5787,HVPEHAVVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5788 31.497 181.0 459760.0 25 0 32097.0 + 32775 SEEAEIIRKY 10 98 619.3241350805955 1236.633717227991 2 619.3249389529228 MULTI CID FTMS 0 0 0 5783 392541.28125 1.0 0 0.0 5 Unmodified _SEEAEIIRKY_ ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;ENST00000490921.5_1_1:226549163-226553858:-|nuORF 76.82478488871298 0.0187167883027705 1 {[ES]|[DT]|[{I|L}C]}EAE{I|L}{I|L}RKY 10 0 {[ES]|[DT]|[{I|L}C]} + + 65.479 7.7288 3.577 5.295 5.295 57.606 0.0 0.0 0.0 0.0 24.51777206135499 0.0 0.0 0 1.8494850021680087 0.0 0.4247425010840047 0.0 + + {[ES]|[DT]|[{I|L}C]}EAE{I|L}{I|L}RKY 5.295 + + 165 + 1 2.152 66766.5 1.0 2395 3391 5783 DOHH2_400M_050219_1,5788 DOHH2_400M_050219_1,5788,SEEAEIIRKY True True SEEAEIIRKY 31.496732 619.324938952923 5137485.5 5783.0 ENST00000490921.5_1_1:226549163-226553858:-|nuORF;;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;;ENSG00000143799|ENST00000366794|PARP1 6.836061318715413 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5789 31.501 244.0 354660.0 25 0 34256.0 + 37617 TLLGAMVK 8 122 416.7516223957021 0 416.7517272830009 PEAK CID FTMS 0 0 0 5783 268455.3125 0.8617015620940667 -1 0.0785713195800781 6 Unmodified _TLLGAMVK_ REV__ENSG00000196248|ENST00000641123|OR10S1;REV__nc|ENSG00000196248|Q8NGN2|OR10S1 14.581692164780916 0.4900557725783909 1 KTT 3 -1 21.031 0.0 0.0 2.5293 0.0 0.0 63.99648853128492 434.2781160943969 498.2746046256818 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 KTT 2.5293 - 154 + 1 2.152 71724.1 1.0 2396 3391 5783 DOHH2_400M_050219_1,5789 DOHH2_400M_050219_1,5789,TLLGAMVK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5790 31.506 283.0 378900.0 25 0 79712.0 + 25221 MVAPRASL 8 113 422.739014212502 843.463475491804 2 422.7388793826103 MULTI CID FTMS 0 0 0 5783 250673.125 0.3165656771350071 -1 0.0785713195800781 7 Unmodified _MVAPRASL_ ENST00000310999.11_1_11:66206256-66206292:-|nuORF 30.63653989081413 0.3996269429323407 1 MVAP[WK]{I|L} 7 3 + 62.088 0.0 0.0 7.3611 7.3611 85.983 0.0 0.0 0.0 42.646249232698224 3.3716008657828667 3.3716008657828667 3.927900303521312 0 1.0669015600442575 2.0 0.0 0.3494850021680094 MVAP[WK]{I|L};MVA[K{I|L}][WP];MV{I|L}[KA][WP];MVAP{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};MVAP{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S;{[ET]|[MV]}A[K{I|L}][WP];{[VA]|[{I|L}G]}M[K{I|L}][WP] 7.3611;6.8954;6.7169;6.6934;5.7102;2.2219;1.3712 -;-;-;+;-;-;- + 132 + 1 2.152 89109.8 1.0 2397 3391 5783 DOHH2_400M_050219_1,5790 DOHH2_400M_050219_1,5790,MVAPRASL False True MVAPRASL 31.506463 422.73887938261 3669745.5 5783.0 ENST00000310999.11_1_11:66206256-66206292:-|nuORF 1.3745530645052593 2.0 True 8.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5791 31.512 305.0 363820.0 25 0 18898.0 + 2664 ATDLTREVY 9 117 534.2723504854405 1066.5301480376809 2 534.2734863162041 MULTI CID FTMS 0 0 0 5783 244927.25 0.3819376011229182 -1 0.0785713195800781 8 Unmodified _ATDLTREVY_ ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-2|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2 59.012897905743536 0.0266285951759547 1 ATD{I|L}TREVY 9 0 + 86.991 0.0 0.0 8.1565 8.1565 95.824 0.0 0.0 0.0 58.54811556341673 16.478174818886373 16.478174818886373 16.167053245199625 0 1.8424778212679485 1.6989700043360187 0.3494850021680094 0.0 + + ATD{I|L}TREVY;ATD[{M(Oxidation (M))|F}V][RP]VY;[TA]DVVETAVY;ATD{I|L}T{I|L}S{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L};[TA]DVVEVTAY;[TA]DVVETVAY;ATD{I|L}[YR]{[ES]|[DT]|[{I|L}C]}{I|L};[TA]DVV[TA]EVY;[TA]DVV{[TV]|[{I|L}S]}EAY;ATY[TP]W{[ES]|[DT]|[{I|L}C]}{I|L} 8.1565;6.6406;5.9363;5.5178;5.2001;4.9921;4.8211;4.7427;4.0065;3.9875 +;-;-;-;-;-;-;-;-;- + 469 + 1 2.152 92592.8 1.0 2398 3391 5783 DOHH2_400M_050219_1,5791 DOHH2_400M_050219_1,5791,ATDLTREVY True True ATDLTREVY 31.512051 534.273486316204 3539632.25 5783.0 nc|ENSG00000024048|Q8IWV8|UBR2;;nc|ENSG00000024048|Q8IWV8-2|UBR2;;ENSG00000024048|ENST00000372901|UBR2 7.212381998697917 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5792 31.517 272.0 415530.0 25 0 26977.0 + + -1 QEKDVFERY 9 119 405.199643906444 0 405.1990234255791 PEAK CID FTMS 0 0 0 5783 165815.328125 1.0 0 0.0 9 Carbamidomethyl (C) _VGYFFAPC(Carbamidomethyl (C))PR_ nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3;ENSG00000036257|ENST00000264414|CUL3 6.630372943996041 0.3961065659209837 1 V{M(Oxidation (M))|F}E 3 -1 13.812 0.0 0.0 1.7086 0.0 0.0 96.02866906113168 334.1523836725219 430.1810527336536 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{M(Oxidation (M))|F}E 1.7086 - 72 + 1 2.152 91229.8 1.0 2399 3391 5783 DOHH2_400M_050219_1,5792 DOHH2_400M_050219_1,5792,VGYFFAPCPR False False QEKDVFERY 31.517078 405.199023425579 995580.5 5783.0 nc|ENSG00000036257|Q13618-2|CUL3;;nc|ENSG00000036257|Q13618-3|CUL3;;ENSG00000036257|ENST00000264414|CUL3 3.8771347999572754 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5793 31.531 800.0 119840.0 25 0 4756.9 43246 WDVVEWSDDQ 10 137 639.76492221241 1277.51529149162 2 639.7654907107353 MULTI CID FTMS 0 0 0 5783 125672.75 0.8650511342437512 1 -0.1347808837890625 10 Unmodified _WDVVEWSDDQ_ ENSG00000137812|ENST00000399668|KNL1;nc|ENSG00000137812|Q8NG31|KNL1 13.042465956692816 0.6287021003332052 1 DEKW 4 8 27.224 0.0 0.0 2.131 0.0 0.0 701.2702408644892 0.0 701.2702408644892 0.0 9.125401122776822 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.0 DEKW 2.131 - 409 1 2.152 77641.3 0.6899999976158142 2400 3391 5783 DOHH2_400M_050219_1,5793 DOHH2_400M_050219_1,5793,WDVVEWSDDQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5794 31.545 800.0 192510.0 25 0 27808.0 + -1 SPKVKMAL 8 159 436.2669101042516 435.2596336376516 1 437.2641174197197 MULTI CID FTMS 0 0 0 5783 84994.4140625 1.0 0 0.0 11 ENSG00000164754|ENST00000297338|RAD21 1 [PS]K 3 -1 18.072 0.0 0.0 4.152 0.0 0.0 0.0 120.05767375899843 120.05767375899843 4.97302484056647 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [PS]K 4.152 - 37 1 2.152 120192.2 0.4699999988079071 2401 3391 5783 DOHH2_400M_050219_1,5794 DOHH2_400M_050219_1,5794, False False SPKVKMAL 31.54473 437.26411741972 678725.75 5783.0 ENSG00000164754|ENST00000297338|RAD21 4.950055917104085 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5795 31.551 359.0 315150.0 25 0 25343.0 + 31698 RRNPEPLRF 9 125 395.5600273040616 1183.658252512385 3 395.8948547244072 MULTI CID FTMS 0 0 0 5783 80088.4921875 0.2106418991530292 -2 0.1254119873046875 12 Unmodified _RRNPEPLRF_ ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2;nc|ENSG00000151366|O95298-3|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 5.783430956126388 0.7127875218398404 1 {[TV]|[{I|L}S]}[YV]T[W{I|L}]R{M(Oxidation (M))|F} 9 6 {[TV]|[{I|L}S]}[YV]T[W{I|L}]R + + 12.218 -7.6312 -0.7492 1.0323 1.0323 48.373 0.0 0.0 0.0 0.0 -0.2557626122369072 -0.2557626122369072 0.0 0 0.0 0.0 0.0 0.0 {[TV]|[{I|L}S]}[YV]T[W{I|L}]R{M(Oxidation (M))|F} 1.0323 - 225 + 1 2.152 97641.2 1.0 2402 3391 5783 DOHH2_400M_050219_1,5795 DOHH2_400M_050219_1,5795,RRNPEPLRF False True RRNPEPLRF 31.551199 395.5608 4556308.0 5783.0 nc|ENSG00000151366|O95298-2|NDUFC2;;ENSG00000151366|ENST00000281031|NDUFC2;;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14;;nc|ENSG00000151366|O95298-3|NDUFC2 3.0312501589457197 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5796 31.556 262.0 505860.0 25 0 44124.0 + 37451 TLDSHESDW 9 155 545.2274544595433 1088.4403559858863 2 545.2286865115166 MULTI CID FTMS 0 0 0 5783 130583.3984375 0.537817874562924 2 -0.2215805053710937 13 Unmodified _TLDSHESDW_ REV__ENSG00000145390|ENST00000692078|USP53 8.593279151180031 0.6146971463335029 1 TSSAVTTAK{I|L} 10 -1 46.931 0.0 0.0 4.3117 0.0 0.0 110.90002503061152 0.0 110.90002503061152 0.0 31.98206988169865 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 TSSAVTTAK{I|L} 4.3117 - 778 + 1 2.152 101926.7 1.0 2403 3391 5783 DOHH2_400M_050219_1,5796 DOHH2_400M_050219_1,5796,TLDSHESDW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5797 31.571 800.0 68816.0 25 0 4132.5 + -1 NEKCRELDQFY 11 79 751.3393728883278 1500.6641928434556 2 751.3394653201103 MULTI CID FTMS 0 0 0 5783 117184.234375 0.4432376945513104 3 -0.3452472686767578 14 Carbamidomethyl (C) _NEKC(Carbamidomethyl (C))RELDQFY_ REV__ENSG00000105810|ENST00000424848|CDK6 7.608950283845883 0.8392484121837455 1 {M(Oxidation (M))|F}[HD]NQQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{M(Oxidation (M))|F}Y 11 -1 + 54.741 0.0 0.0 3.6478 3.6478 76.289 0.0 0.0 0.0 31.809645090666088 1.3200105795410266 1.3200105795410266 6.368220975871743 0 0.5 0.0 0.0 0.7302046884880937 {M(Oxidation (M))|F}[HD]NQQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{M(Oxidation (M))|F}Y;{M(Oxidation (M))|F}[HD]NQQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QY{M(Oxidation (M))|F};[QA]EQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQN[HD]E 3.6478;3.2235;2.5737 -;-;- 762 + 1 2.152 45192.1 0.6899999976158142 2404 3391 5783 DOHH2_400M_050219_1,5797 DOHH2_400M_050219_1,5797,NEKCRELDQFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5798 31.581 564.0 331250.0 25 0 49870.0 29370 QKRELRYLP 9 148 401.5717066270407 1201.6932904813225 3 401.5715515017509 MULTI CID FTMS 0 0 0 5783 115904.703125 0.4919161996506141 -2 0.1254119873046875 15 Unmodified _QKRELRYLP_ ENST00000395134.3_1_6:33257397-33257646:+|nuORF 13.614867670302877 0.4681447649821485 1 {[RE]|[WV]}AV{[QN]|[E{I|L}]|[KN]}{I|L}YP{I|L} 10 7 + 21.105 0.0 0.0 1.7562 1.7562 80.102 0.0 0.0 0.0 0.4171121664564552 6.500606022938705 0.4171121664564552 21.10469979270058 0 0.5994850021680094 0.0 0.3252574989159953 0.3494850021680094 {[RE]|[WV]}AV{[QN]|[E{I|L}]|[KN]}{I|L}YP{I|L} 1.7562 - 210 1 2.152 144259.4 1.0 2405 3391 5783 DOHH2_400M_050219_1,5798 DOHH2_400M_050219_1,5798,QKRELRYLP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5799 31.588 353.0 168510.0 25 0 13160.0 -1 IVCRITKPA 9 111 529.3121124740271 0 529.7616454958916 PEAK CID FTMS 0 0 0 -1 0 16 Carbamidomethyl (C) _IVC(Carbamidomethyl (C))RITKPA_ ENSG00000087237|ENST00000200676|CETP;nc|ENSG00000087237|P11597-2|CETP 8.593279151180031 0.3284076903191179 1 S 1 -1 6.9897 0.0 0.0 0.66152 0.0 0.0 440.32031762207913 526.2488497369749 966.569167359054 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.66152 - 33 + 1 2.152 52627.9 1.0 2406 3391 5783 DOHH2_400M_050219_1,5799 DOHH2_400M_050219_1,5799,IVCRITKPA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5800 31.601 800.0 49487.0 25 0 5661.4 -1 0 79 901.8852416872978 0 901.8852416872978 PEAK CID FTMS 0 0 0 -1 0 17 1 {M(Oxidation (M))|F}GGG 4 -1 16.542 0.0 0.0 0.91812 0.0 0.0 1302.5459522693236 178.0514315240844 1480.597383793408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}GGG 0.91812 - 183 + 1 2.152 35213.1 0.6000000238418579 2407 3391 5783 DOHH2_400M_050219_1,5800 DOHH2_400M_050219_1,5800, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5801 31.616 800.0 131030.0 25 0 27100.0 + 10454 FTGEDYRSLKS 11 95 434.8821441652029 0 434.8824645876884 PEAK CID FTMS 0 0 0 5783 84614.1953125 0.6813688202881076 78 -7.294395446777344 18 Unmodified _FTGEDYRSLKS_ REV__ENSG00000081803|ENST00000449022|CADPS2;REV__nc|ENSG00000081803|Q86UW7-2|CADPS2;REV__nc|ENSG00000081803|Q86UW7-3|CADPS2 5.296884461304476 0.47618401536486 1 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.35712 0.0 0.0 345.534904930212 372.1449679010376 717.6798728312496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.35712 + + 2 + 1 2.152 86351.0 0.5099999904632568 2408 3391 5783 DOHH2_400M_050219_1,5801 DOHH2_400M_050219_1,5801,FTGEDYRSLKS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5803 31.622 68.0 964790.0 25 0 116370.0 -1 YACTNMCV 8 71 481.18249705809694 960.350441182994 2 481.1826354861259 MULTI CID FTMS 0 0 0 5802 734428.6875 0.2582847742167026 1 -0.0867996215820312 1 Carbamidomethyl (C) _YACTNMC(Carbamidomethyl (C))V_ ENST00000330651.10_1_22:50703087-50703225:-|nuORF 8.593279151180031 0.7721714526254883 1 YS 2 -1 22.831 0.0 0.0 2.3774 0.0 0.0 0.0 707.2339240503551 707.2339240503551 4.926069012748609 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YS 2.3774 - 77 + 1 2.129 58991.7 1.0 2409 3392 5802 DOHH2_400M_050219_1,5803 DOHH2_400M_050219_1,5803,YACTNMCV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5804 31.625 182.0 351630.0 25 0 24921.0 + 36794 TEHPKINEW 9 111 577.2853064683261 1152.556060003452 2 577.2857543826103 MULTI CID FTMS 0 0 0 5802 285871.59375 0.3076094913521629 1 -0.0867996215820312 2 Unmodified _TEHPKINEW_ ENSG00000197102|ENST00000360184|DYNC1H1 57.72198328787511 0.0273433238377839 1 RREM{[NV]|[RG]}YW 8 7 + 32.457 0.0 0.0 2.8161 2.8161 73.118 0.0 0.0 0.0 15.135059171916437 1.911225100727592 1.911225100727592 4.8425096240312335 0 0.8807196863200843 0.0 0.3807196863200844 0.0 RREM{[NV]|[RG]}YW;RREM{[NV]|[RG]}H[DP];RREM{[NV]|[RG]}WY;[KP]{I|L}NEHTEW;RREM{[NV]|[RG]}[DP]H;[KP]{I|L}GGEHTEW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[KA][{I|L}V]H[DP];[KP]{I|L}NEHW{[ET]|[MV]};[KP]{I|L}NEWH{[ET]|[MV]};[KP]{I|L}N[W{M(Oxidation (M))|F}]Y{[DA]|[EG]} 2.8161;2.396;2.3774;2.2426;1.5697;1.4436;1.4317;1.2217;1.2217;1.1807 -;-;-;-;-;-;-;-;-;- 403 + 1 2.129 55382.7 1.0 2410 3392 5802 DOHH2_400M_050219_1,5804 DOHH2_400M_050219_1,5804,TEHPKINEW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5805 31.626 13.0 4567000.0 25 0 689470.0 + 16108 ITSSAVTTALK 11 71 546.3188592614249 1090.6231655896495 2 546.3190795779228 MULTI CID FTMS 0 0 0 5802 4756509.0 0.3373103948988468 -1 0.1347808837890625 3 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 36.39500950444726 0.267929034476522 1 {I|L}TSSAVTT[{I|L}A]K 11 0 + 91.446 0.0 0.0 8.3847 8.3847 96.92 0.0 0.0 0.0 77.35532334037141 6.064247967304112 6.064247967304112 22.316085869055115 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + + {I|L}TSSAVTT[{I|L}A]K;{I|L}TS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TT[{I|L}A]K 8.3847;6.3386 +;- + 132 + 1 2.129 48320.4 1.0 2411 3392 5802 DOHH2_400M_050219_1,5805 DOHH2_400M_050219_1,5805,ITSSAVTTALK False True False False splicing PXD020620_cell_line DOHH2_400M_050219_1 5806 31.628 81.0 931520.0 25 0 137650.0 + 20228 LLDEHHISY 9 87 563.7799388201113 1125.5453247070225 2 563.7802001833916 MULTI CID FTMS 0 0 0 5802 794461.9375 0.3357101174333911 -1 0.1347808837890625 4 Unmodified _LLDEHHISY_ ENSG00000100014|ENST00000314328|SPECC1L;nc|ENSG00000100014|Q69YQ0-2|SPECC1L 90.13494162714682 0.0149365284241176 1 {I|L}{I|L}DEHH{I|L}SY 9 0 + 91.186 0.0 0.0 8.1015 8.1015 95.94 0.0 0.0 0.0 44.73751181782866 14.973024840566469 14.973024840566469 17.26789385964942 0 2.2658715643802765 2.0 0.4247425010840047 0.0 + + {I|L}{I|L}DEHH{I|L}SY;{I|L}{I|L}[HM]{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{I|L}{I|L}[HM]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}SY;{I|L}HM{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{I|L}{I|L}DEHHS{I|L}Y;{I|L}{I|L}[HM]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}RY;{I|L}{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C)){[QN]|[E{I|L}]|[KN]}RY;{I|L}HM{I|L}{[{M(Oxidation (M))|F}C]|[YS]}{I|L}SY;{I|L}{I|L}D{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}DY;{I|L}{I|L}D{[{M(Oxidation (M))|F}D]|MM}D{I|L}{I|L}Y 8.1015;6.5673;6.1638;5.7383;5.2418;5.0603;4.9458;4.6582;4.3868;4.2974 +;-;-;-;-;-;-;-;-;- + 1175 + 1 2.129 60930.4 1.0 2412 3392 5802 DOHH2_400M_050219_1,5806 DOHH2_400M_050219_1,5806,LLDEHHISY True True LLDEHHISY 31.628071 563.780200183392 43285420.0 5802.0 nc|ENSG00000100014|Q69YQ0-2|SPECC1L;;ENSG00000100014|ENST00000314328|SPECC1L 8.02921199798584 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5807 31.63 83.0 786010.0 25 0 76125.0 + -1 LDIIKQKC 8 81 509.2908014012846 1016.5670498693692 2 509.2917358279228 MULTI CID FTMS 0 0 0 5802 522719.53125 0.8305989370613814 -1 0.1347808837890625 5 Carbamidomethyl (C) _LDIIKQKC(Carbamidomethyl (C))_ REV__ENSG00000213341|ENST00000370397|CHUK;REV__ENST00000590930.5_1_10:101953728-101953884:-|nuORF 28.486842064014134 0.4448922141344407 1 D{I|L}{I|L}{I|L}K 5 -1 70.701 0.0 0.0 6.9549 0.0 0.0 0.0 431.1737459772094 431.1737459772094 56.72167511924052 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.3494850021680094 D{I|L}{I|L}{I|L}K 6.9549 - 72 + 1 2.129 55541.5 1.0 2413 3392 5802 DOHH2_400M_050219_1,5807 DOHH2_400M_050219_1,5807,LDIIKQKC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5808 31.632 94.0 951080.0 25 0 175620.0 + 20230 LLDEHHISY 9 100 376.1890538217943 1125.545332065583 3 376.1884643435478 MULTI CID FTMS 0 0 0 5802 525146.625 0.2550635404445754 -1 0.1347808837890625 6 Unmodified _LLDEHHISY_ ENSG00000100014|ENST00000314328|SPECC1L;nc|ENSG00000100014|Q69YQ0-2|SPECC1L 24.99096001346401 0.2132109383330889 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY 9 7 + 60.537 0.0 0.0 5.3785 5.3785 76.351 0.0 0.0 0.0 16.44180373925373 14.973024840566469 14.973024840566469 1.2763625255165325 0 0.0 1.154901959985743 1.0114393726401687 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}S{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{I|L}{I|L}[HM]{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D{I|L}D{[HG]|PP}Y;{NN|[MP]|[D{I|L}]|[EV]}MM{I|L}D{I|L}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}D{I|L}{I|L}D{[HG]|PP}Y;{NN|[MP]|[D{I|L}]|[EV]}MM{I|L}{I|L}D{I|L}Y;HHED{I|L}{I|L}S{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}{[CP]|[EA]}H{I|L}SY;HHED{I|L}S{I|L}{I|L}Y 5.3785;5.2651;4.1861;4.0123;4.001;3.8582;3.8469;3.6254;3.5464;3.512 -;-;-;-;-;-;-;-;-;- 944 + 1 2.129 76187.6 1.0 2414 3392 5802 DOHH2_400M_050219_1,5808 DOHH2_400M_050219_1,5808,LLDEHHISY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5809 31.638 326.0 268480.0 25 0 16983.0 6771 EEADWIYRNAF 11 116 707.3239191790292 1412.6332854248585 2 707.3232910037041 MULTI CID FTMS 0 0 0 5802 215894.8125 0.4755748830566939 -1 0.1347808837890625 7 Unmodified _EEADWIYRNAF_ ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 19.361941925380144 0.6323962752489956 1 {[QG]|[NA]}GA{M(Oxidation (M))|F}G{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F} 14 10 + 101.03 0.0 0.0 7.1519 7.1519 81.329 0.0 0.0 0.0 10.383439819133612 16.667853209646168 10.383439819133612 0.8895283288866978 0 1.2619229975844686 1.3010299956639813 0.3252574989159953 2.5807808920067155 {[QG]|[NA]}GA{M(Oxidation (M))|F}G{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}G{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}G{[MS]|[{M(Oxidation (M))|F}A]}A[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}G{[MS]|[{M(Oxidation (M))|F}A]}AQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}G{[MS]|[{M(Oxidation (M))|F}A]}AQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[AG]QNA{M(Oxidation (M))|F} 7.1519;7.089;6.848;6.7869;6.5113;6.5113;6.5113;6.4467;6.4467;6.4467 -;-;-;-;-;-;-;-;-;- 4079 1 2.129 66155.1 1.0 2415 3392 5802 DOHH2_400M_050219_1,5809 DOHH2_400M_050219_1,5809,EEADWIYRNAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5810 31.646 451.0 192430.0 25 0 16190.0 + 21515 LPIIETTL 8 123 450.274518454863 898.5344839765261 2 450.2744323611259 MULTI CID FTMS 0 0 0 5802 194124.4375 1.0 0 0.0 8 Unmodified _LPIIETTL_ REV__ENSG00000144580|ENST00000273064|CNOT9;REV__nc|ENSG00000144580|Q92600-2|CNOT9;REV__nc|ENSG00000144580|Q92600-3|CNOT9 13.50788311687929 0.7113601687236069 1 TT{I|L} 3 -1 21.414 0.0 0.0 2.3833 0.0 0.0 565.3399209230032 0.0 565.3399209230032 0.0 6.810318954042671 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 TT{I|L} 2.3833 + + 61 + 1 2.129 71244.8 1.0 2416 3392 5802 DOHH2_400M_050219_1,5810 DOHH2_400M_050219_1,5810,LPIIETTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5811 31.653 423.0 173850.0 25 0 16570.0 38662 TTKIGHLSEVK 11 103 404.90453266223176 0 404.9044677615166 PEAK CID FTMS 0 0 0 5802 145730.09375 0.9781137088755704 1 -0.0867996215820312 9 Unmodified _TTKIGHLSEVK_ ENST00000309594.4_1_13:21751731-21751851:+|nuORF 18.373094154950223 0.3729378939122973 1 {M(Oxidation (M))|F}E 2 10 7.9588 0.0 0.0 0.98525 0.0 0.0 194.5076604398948 334.1526888483032 528.660349288198 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}E 0.98525 - 47 + 1 2.129 62127.4 1.0 2417 3392 5802 DOHH2_400M_050219_1,5811 DOHH2_400M_050219_1,5811,TTKIGHLSEVK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5812 31.659 306.0 278100.0 25 0 28500.0 -1 GDWMAMSM 8 136 488.6650687554501 975.3155845777004 2 488.6652404665947 MULTI CID FTMS 0 0 0 5802 132625.5 0.4764879244897478 1 -0.0867996215820312 10 3 Oxidation (M) _GDWM(Oxidation (M))AM(Oxidation (M))SM(Oxidation (M))_ ENSG00000134516|ENST00000520908|DOCK2;ENST00000522994.1_1_5:169412837-169427133:+|nuORF;ENST00000523351.5_1_5:169188379-169509859:+|nuORF 2.577480529830294 0.808687252328423 1 Y 1 -1 13.979 0.0 0.0 1.4333 0.0 0.0 794.2410434173472 0.0 794.2410434173472 0.0 1.6281950349953611 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4333 - 106 + 1 2.129 66750.5 1.0 2418 3392 5802 DOHH2_400M_050219_1,5812 DOHH2_400M_050219_1,5812,GDWMAMSM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5813 31.666 364.0 298230.0 25 0 11375.0 10614 FVLQLRPSL 9 131 358.2226973964201 0 358.2230102419853 PEAK CID FTMS 0 0 0 5802 127292.4609375 1.0 0 0.0 11 Unmodified _FVLQLRPSL_ ENSG00000152578|ENST00000282499|GRIA4;ENST00000525032.1_1_11:105481676-105732994:+|nuORF;nc|ENSG00000152578|P48058-2|GRIA4 4.5288652416199255 0.3444685223463734 1 {I|L} 1 8 5.4846 0.0 0.0 0.76768 0.0 0.0 243.1586383457714 355.16816126041255 598.326799606184 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.76768 + + 21 + 1 2.129 94638.8 1.0 2419 3392 5802 DOHH2_400M_050219_1,5813 DOHH2_400M_050219_1,5813,FVLQLRPSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5814 31.672 358.0 154300.0 25 0 8886.0 + 36881 TEPIRDVEF 9 110 553.2822151748168 1104.5498774164334 2 553.2814819216728 MULTI CID FTMS 0 0 0 5802 130904.359375 1.0 0 0.0 12 Unmodified _TEPIRDVEF_ REV__nc|ENSG00000211695|Q99603|TRGV9 14.838274106304384 0.4350285940865338 1 TTE{M(Oxidation (M))|F} 4 -1 37.423 0.0 0.0 3.3881 0.0 0.0 608.3397083966812 0.0 608.3397083966812 0.0 22.81865655543953 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 TTE{M(Oxidation (M))|F} 3.3881 - 116 1 2.129 49282.0 1.0 2420 3392 5802 DOHH2_400M_050219_1,5814 DOHH2_400M_050219_1,5814,TEPIRDVEF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5815 31.677 244.0 286270.0 25 0 27079.0 + -1 PLPRRRGMI 9 107 556.3320833232693 0 556.3336059451103 PEAK CID FTMS 0 0 0 5802 134266.546875 1.0 0 0.0 13 Oxidation (M) _PLPRRRGM(Oxidation (M))I_ REV__ENSG00000130997|ENST00000511885|POLN;REV__ENST00000503601.1_1_4:2083186-2091962:-|nuORF;REV__ENST00000514858.5_1_4:2082849-2194957:-|nuORF 4.75600775471527 0.3444685223463735 1 {I|L}YV 3 -1 11.682 0.0 0.0 1.0519 0.0 0.0 180.2091973088448 552.2252291315061 732.434426440351 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}YV 1.0519 - 49 + 1 2.129 58085.1 1.0 2421 3392 5802 DOHH2_400M_050219_1,5815 DOHH2_400M_050219_1,5815,PLPRRRGMI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5816 31.685 394.0 173980.0 25 0 15530.0 + 33341 SGDPGGALSY 10 103 462.20912225163926 922.4036915700784 2 462.2098571658134 MULTI CID FTMS 0 0 0 5802 154789.546875 0.4409801948808977 1 -0.0867996215820312 14 Unmodified _SGDPGGALSY_ ENST00000266557.3_1_12:6554080-6554389:+|nuORF 18.1463463914782 0.5430639438673815 1 [H{I|L}][C(Carbamidomethyl (C))M]{I|L}SY 7 7 [H{I|L}][C(Carbamidomethyl (C))M]{I|L} + + 28.469 0.45757 0.069934 3.0864 3.0864 50.679 0.0 0.0 0.0 0.0 17.755762612236907 0.0 0.0 0 0.5 0.0 0.25 0.0 [H{I|L}][C(Carbamidomethyl (C))M]{I|L}SY 3.0864 - 116 + 1 2.129 57639.4 1.0 2422 3392 5802 DOHH2_400M_050219_1,5816 DOHH2_400M_050219_1,5816,SGDPGGALSY False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5817 31.69 251.0 323770.0 25 0 55579.0 29770 QPSQFSFSES 10 110 572.2506353893724 1142.4867178455447 2 572.2513915896416 MULTI CID FTMS 0 0 0 5802 133838.03125 0.4085357768816676 -1 0.1347808837890625 15 Unmodified _QPSQFSFSES_ ENST00000318948.6_1_21:16340786-16386756:-|nuORF 18.1463463914782 0.5430639438673815 1 [QP]SVDDY 7 7 32.796 0.0 0.0 2.8706 0.0 0.0 0.0 335.127867097751 335.127867097751 14.837061076922922 0.0 0.0 0.0 0 0.0 0.0 1.555462187404089 0.3252574989159953 [QP]SVDDY 2.8706 - 756 1 2.129 66413.6 1.0 2423 3392 5802 DOHH2_400M_050219_1,5817 DOHH2_400M_050219_1,5817,QPSQFSFSES False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5818 31.703 800.0 28352.0 25 0 3093.3 -1 0 57 801.1222859222877 3200.4600378227506 4 801.8750488162041 MULTI CID FTMS 0 0 0 5802 76707.2734375 1.0 0 0.0 16 1 H 1 -1 5.4846 0.0 0.0 0.17137 0.0 0.0 2678.247465656538 382.1284578912719 3060.37592354781 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.17137 - 10 + 1 2.129 26031.2 0.5899999737739563 2424 3392 5802 DOHH2_400M_050219_1,5818 DOHH2_400M_050219_1,5818, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5820 31.71 187.0 332470.0 25 0 55825.0 -1 PLGCCSCCTR 10 81 635.7413706826909 1269.4681884321817 2 635.7414428591728 MULTI CID FTMS 0 0 0 5819 273720.0625 0.4137464826521594 2 -0.1720504760742187 1 4 Carbamidomethyl (C) _PLGC(Carbamidomethyl (C))C(Carbamidomethyl (C))SC(Carbamidomethyl (C))C(Carbamidomethyl (C))TR_ ENST00000399298.7_1_10:63212760-63213120:-|nuORF 1.6526216038709556 0.7189921496796233 1 EEK{M(Oxidation (M))|F}{I|L}R 6 -1 33.365 0.0 0.0 2.6283 0.0 0.0 449.0243097507974 0.0 449.0243097507974 0.0 22.10581543087944 0.0 0.0 0 0.0 0.0 0.0 0.0 EEK{M(Oxidation (M))|F}{I|L}R 2.6283 - 62 + 1 2.104 51115.1 1.0 2425 3393 5819 DOHH2_400M_050219_1,5820 DOHH2_400M_050219_1,5820,PLGCCSCCTR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5821 31.713 112.0 441630.0 25 0 43369.0 + -1 AECCRKIVP 9 74 566.7848087042884 1131.5550644753766 2 566.7848998904228 MULTI CID FTMS 0 0 0 5819 289325.5625 0.2685723087705293 3 -0.201080322265625 2 2 Carbamidomethyl (C) _AEC(Carbamidomethyl (C))C(Carbamidomethyl (C))RKIVP_ REV__ENSG00000197653|ENST00000673944|DNAH10;REV__nc|ENSG00000197653|Q8IVF4|DNAH10 12.531546534597751 0.4974689918368763 1 [KA]GSVA 6 -1 26.956 0.0 0.0 2.3822 0.0 0.0 0.0 615.2556856744749 615.2556856744749 7.9761469314082944 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 [KA]GSVA 2.3822 - 109 + 1 2.104 42048.5 1.0 2426 3393 5819 DOHH2_400M_050219_1,5821 DOHH2_400M_050219_1,5821,AECCRKIVP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5822 31.714 56.0 894380.0 25 0 106630.0 + 24353 MENIHSEMY 9 79 577.2357779858771 1152.457003038554 2 577.2361938357353 MULTI CID FTMS 0 0 0 5819 964690.8125 0.5061280800337404 -1 0.0867996215820312 3 Unmodified _MENIHSEMY_ ENSG00000171848|ENST00000304567|RRM2;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 47.594388314883695 0.0456443387682827 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{I|L}HSEMY 9 0 + 62.898 0.0 0.0 5.4577 5.4577 85.995 0.0 0.0 0.0 5.642492736872597 43.913187455970544 5.642492736872597 9.208187539523747 0 1.3807196863200843 0.0 0.9247425010840048 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{I|L}HSEMY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GG{I|L}HSEMY;[HS]{[QV]|[N{I|L}]|[RA]|[KV]}EMEMY;{[ES]|[DT]|[{I|L}C]}[RD]HSEMY;[HS]{[QV]|[N{I|L}]|[RA]|[KV]}EEMMY;[HS]E{[QV]|[N{I|L}]|[RA]|[KV]}MEMY;[HS]E[RD]SEMY;[HS]EM{[QV]|[N{I|L}]|[RA]|[KV]}EMY;{[ES]|[DT]|[{I|L}C]}H{[QV]|[N{I|L}]|[RA]|[KV]}MEMY;[MT][HD]{[QV]|[N{I|L}]|[RA]|[KV]}EMY 5.4577;4.6587;4.0648;3.8307;3.8048;3.7195;3.6775;3.6775;3.5424;3.5247 +;-;-;-;-;-;-;-;-;- + 270 1 2.104 45287.5 1.0 2427 3393 5819 DOHH2_400M_050219_1,5822 DOHH2_400M_050219_1,5822,MENIHSEMY True True MENIHSEMY 31.714114 577.236193835735 9992107.0 5819.0 ENSG00000171848|ENST00000304567|RRM2;;nc|ENSG00000171848|P31350-2|RRM2;;ENST00000491447.1_1_2:10262886-10264978:+|nuORF 8.530102888743082 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5823 31.715 53.0 668280.0 25 0 92640.0 + 20299 LLEDKHFQSY 10 66 640.3192897833284 1278.6240266334569 2 640.3195678591728 MULTI CID FTMS 0 0 0 5819 799021.875 1.0 0 0.0 4 Unmodified _LLEDKHFQSY_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 32.037481411007896 0.2488723560272515 1 {I|L}{I|L}EDW 5 6 57.524 0.0 0.0 4.4989 0.0 0.0 0.0 619.3021944635374 619.3021944635374 34.776296993281406 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.0 {I|L}{I|L}EDW 4.4989 - 141 + 1 2.104 33169.9 1.0 2428 3393 5819 DOHH2_400M_050219_1,5823 DOHH2_400M_050219_1,5823,LLEDKHFQSY False True LLEDKHFQSY 31.715495 640.319567859173 4971530.5 5819.0 ENST00000420783.7_1_3:49044839-49051550:+|nuORF;;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;;ENST00000489684.2_1_3:49044864-49050780:+|nuORF;;ENSG00000178252|ENST00000608424|WDR6 8.125936349232992 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5824 31.718 116.0 411750.0 25 0 44296.0 + 499 AEGSVAREEW 10 78 567.2640301923406 1132.513507451481 2 567.2648803591728 MULTI CID FTMS 0 0 0 5819 390700.03125 1.0 0 0.0 5 Unmodified _AEGSVAREEW_ ENSG00000173418|ENST00000334982|NAA20;nc|ENSG00000173418|P61599-2|NAA20 30.7034409873982 0.2788461460996952 1 {[CP]|[EA]}GSVA 6 4 33.689 0.0 0.0 2.9748 0.0 0.0 0.0 615.2493990533811 615.2493990533811 16.387437564371012 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.3807196863200844 0.0 + {[CP]|[EA]}GSVA 2.9748 + + 176 + 1 2.104 40780.3 1.0 2429 3393 5819 DOHH2_400M_050219_1,5824 DOHH2_400M_050219_1,5824,AEGSVAREEW False True AEGSVAREEW 31.717922 567.264880359173 6315044.0 5819.0 nc|ENSG00000173418|P61599-2|NAA20;;ENSG00000173418|ENST00000334982|NAA20 7.382054169972737 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5825 31.721 138.0 617560.0 25 0 117200.0 + 38931 TVLSRANSL 9 95 480.77734670672464 959.5401404802492 2 480.7775451540947 MULTI CID FTMS 0 0 0 5819 361626.15625 0.6780841920985513 -1 0.0867996215820312 6 Unmodified _TVLSRANSL_ ENSG00000129128|ENST00000503362|SPCS3;ENST00000507678.5_1_4:177241188-177241371:+|nuORF;ENST00000513139.1_1_4:177241188-177248429:+|nuORF 47.74868867922204 0.0453060283459952 1 {[TV]|[{I|L}S]}{I|L}{I|L}[WE]S{I|L} 8 4 + 47.885 0.0 0.0 4.9905 4.9905 79.019 0.0 0.0 0.0 34.786465885450966 7.127750241648201 7.127750241648201 4.247425010840047 0 0.4247425010840047 2.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}{I|L}{I|L}[WE]S{I|L};{[TV]|[{I|L}S]}{I|L}{I|L}[WD]T{I|L};{[TV]|[{I|L}S]}R{[WS]|[C(Carbamidomethyl (C)){I|L}]}RR;{[TV]|[{I|L}S]}R{[TV]|[{I|L}S]}{[DA]|[EG]}[KA] 4.9905;4.5478;2.4255;1.2163 -;-;-;- 112 + 1 2.104 69229.2 1.0 2430 3393 5819 DOHH2_400M_050219_1,5825 DOHH2_400M_050219_1,5825,TVLSRANSL True True TVLSRANSL 31.720695 480.777545154095 3074310.5 5819.0 ENST00000513139.1_1_4:177241188-177248429:+|nuORF;;ENSG00000129128|ENST00000503362|SPCS3;;ENST00000507678.5_1_4:177241188-177241371:+|nuORF 3.335988601048788 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5826 31.724 167.0 408780.0 25 0 28498.0 + + -1 AEMERTSVL 9 93 518.2605235372707 0 518.2614013552666 PEAK CID FTMS 0 0 0 5819 247622.1875 1.0 0 0.0 7 Carbamidomethyl (C) _AEAPLYC(Carbamidomethyl (C))VI_ nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;ENST00000536587.5_1_11:95546139-95548377:+|nuORF;nc|ENSG00000166037|Q86XR8-5|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-2|CEP57;ENSG00000166037|ENST00000325542|CEP57;ENST00000541768.1_1_11:95546181-95551118:+|nuORF 36.04419817259434 0.0811646137502998 1 V{[CP]|[EA]}S 4 -1 19.851 0.0 0.0 1.9189 0.0 0.0 131.0965953149726 514.2101489334406 645.3067442484132 0.0 0.0 0.0 0.0 0 1.2059771852360797 0.0 0.7614393726401688 0.0 V{[CP]|[EA]}S 1.9189 - 84 + 1 2.104 55616.9 1.0 2431 3393 5819 DOHH2_400M_050219_1,5826 DOHH2_400M_050219_1,5826,AEAPLYCVI False False AEMERTSVL 31.723987 518.261401355267 1429178.375 5819.0 nc|ENSG00000166037|Q86XR8-3|CEP57;;nc|ENSG00000166037|Q86XR8-4|CEP57;;ENST00000536587.5_1_11:95546139-95548377:+|nuORF;;nc|ENSG00000166037|Q86XR8-5|CEP57;;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;;nc|ENSG00000166037|Q86XR8-2|CEP57;;ENSG00000166037|ENST00000325542|CEP57;;ENST00000541768.1_1_11:95546181-95551118:+|nuORF 4.94069258371989 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5827 31.737 775.0 236290.0 25 0 25290.0 28993 QDVYHHEHIED 11 162 711.3076441748542 1420.6007354165083 2 711.8005248904228 MULTI CID FTMS 0 0 0 5819 237371.859375 0.0133030696170963 18 -1.323822021484375 8 Unmodified _QDVYHHEHIED_ ENSG00000243710|ENST00000372492|CFAP57 20.41453444215458 0.6105011870913812 1 [QA]HDEAEQGGA{M(Oxidation (M))|F} 12 10 92.47 0.0 0.0 6.5092 0.0 0.0 0.0 177.05846523402184 177.05846523402184 40.56628113872279 0.0 0.0 0.0 0 0.0 0.0 1.7090606190045112 2.3086946584237547 [QA]HDEAEQGGA{M(Oxidation (M))|F} 6.5092 - 42159 1 2.104 131585.2 1.0 2432 3393 5819 DOHH2_400M_050219_1,5827 DOHH2_400M_050219_1,5827,QDVYHHEHIED False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5828 31.741 197.0 340190.0 25 0 41008.0 + 11826 GLPGHLTE 8 101 412.2205898863578 822.4266268395156 2 412.2211791872978 MULTI CID FTMS 0 0 0 5819 158707.171875 0.6316623221944199 1 -0.123666763305664 9 Unmodified _GLPGHLTE_ REV__ENSG00000163646|ENST00000327047|CLRN1;REV__nc|ENSG00000163646|P58418-1|CLRN1;REV__nc|ENSG00000163646|P58418-4|CLRN1 28.17323086031832 0.4514957916281387 1 [H{I|L}][NP]{I|L}TE 7 -1 + 34.225 0.0 0.0 4.1615 4.1615 76.993 0.0 0.0 0.0 5.228787452803374 8.31735825285401 5.228787452803374 5.228787452803374 0 0.6989700043360187 1.3979400086720375 0.0 0.0 [H{I|L}][NP]{I|L}TE;[NP]{I|L}H{I|L}TE 4.1615;3.5257 -;- 48 1 2.104 59074.2 1.0 2433 3393 5819 DOHH2_400M_050219_1,5828 DOHH2_400M_050219_1,5828,GLPGHLTE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5829 31.755 800.0 108900.0 25 0 20362.0 -1 LVVTQRRFPTM 11 110 682.3819512221164 0 682.3830444216728 PEAK CID FTMS 0 0 0 5819 162594.390625 1.0 0 0.0 10 Oxidation (M) _LVVTQRRFPTM(Oxidation (M))_ ENSG00000222046|ENST00000409358|DCDC2B 10.073929032068715 0.4495801685015257 1 VTS 3 -1 10.049 0.0 0.0 0.7374 0.0 0.0 894.5238684092734 178.05153833560783 1072.575406744881 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 VTS 0.7374 - 58 + 1 2.104 67778.0 0.8799999952316284 2434 3393 5819 DOHH2_400M_050219_1,5829 DOHH2_400M_050219_1,5829,LVVTQRRFPTM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5830 31.769 800.0 146650.0 25 0 10178.0 + -1 FCVCFFKFPFY 11 114 781.3555269431465 1560.696500953093 2 781.3563720583916 MULTI CID FTMS 0 0 0 5819 143119.046875 1.0 0 0.0 11 2 Carbamidomethyl (C) _FC(Carbamidomethyl (C))VC(Carbamidomethyl (C))FFKFPFY_ REV__ENST00000474340.1_1_9:95003027-95004705:-|nuORF 6.2057823575117 0.8458686499021061 1 QHDEAQQNA{M(Oxidation (M))|F}Y 11 -1 80.751 0.0 0.0 5.174 0.0 0.0 211.13282973457189 0.0 211.13282973457189 0.0 65.41625492833109 0.0 0.0 0 1.1237125054200234 0.0 0.3252574989159953 1.1549471895720984 QHDEAQQNA{M(Oxidation (M))|F}Y 5.174 - 1482 1 2.104 84831.4 0.7900000214576721 2435 3393 5819 DOHH2_400M_050219_1,5830 DOHH2_400M_050219_1,5830,FCVCFFKFPFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5831 31.783 800.0 298340.0 25 0 20759.0 23862 LVKKEKIL 8 182 485.8370981470853 0 485.8371459841728 PEAK CID FTMS 0 0 0 5819 144814.15625 1.0 0 0.0 12 Unmodified _LVKKEKIL_ ENST00000510291.5_1_6:82923995-82924100:-|nuORF 44.40701690623563 0.1214779822192256 1 {I|L}VK{I|L}KV 6 4 14.959 0.0 0.0 1.5427 0.0 0.0 149.10404508103767 137.0361269586547 286.1401720396924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VK{I|L}KV 1.5427 - 248 + 1 2.104 186368.1 0.7599999904632568 2436 3393 5819 DOHH2_400M_050219_1,5831 DOHH2_400M_050219_1,5831,LVKKEKIL True False GEGSFGRVY 31.782685 485.837145984173 627554.6875 5819.0 nc|ENSG00000163482|Q9NRP7-2|STK36;;ENSG00000163482|ENST00000295709|STK36;;ENST00000468026.1_1_2:219537552-219537744:+|nuORF;;ENST00000455724.5_1_2:219537552-219538396:+|nuORF;;ENST00000473557.1_1_2:219537552-219538357:+|nuORF -0.0563126603762308 2.0 False 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5832 31.798 800.0 213310.0 25 0 14249.0 + -1 DEKYMRTGYFY 11 130 744.8261246804774 1487.6376964277547 2 744.8231078982353 MULTI CID FTMS 0 0 0 5819 134355.25 1.0 0 0.0 13 Oxidation (M) _DEKYM(Oxidation (M))RTGYFY_ REV__ENSG00000099954|ENST00000262608|CECR2;REV__nc|ENSG00000099954|Q9BXF3-2|CECR2;REV__nc|ENSG00000099954|Q9BXF3|CECR2 12.240655878213236 0.7805268987462184 1 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQAD[Y{M(Oxidation (M))|F}] 14 -1 + 64.193 0.0 0.0 4.3151 4.3151 72.78 0.0 0.0 0.0 1.3937232207845156 1.3937232207845156 1.3937232207845156 1.3937232207845156 0 0.5 0.6575773191777937 0.2887254899964357 1.2931576817365436 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQAD[Y{M(Oxidation (M))|F}];[EP]TANQ[R{M(Oxidation (M))|F}]ES{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQW[Y{M(Oxidation (M))|F}];{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AT[HA];{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQDA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}GAG{M(Oxidation (M))|F}[KA]MQNAT[HA];{[QG]|[NA]}GQ{M(Oxidation (M))|F}EAQQAD[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}[KA]MQNAT[HA];{[QG]|[NA]}AGG{M(Oxidation (M))|F}EAQQAD[Y{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}[DV]SEAQQNAT[HA] 4.3151;4.2214;4.1876;4.1604;4.0677;3.9566;3.8751;3.8554;3.834;3.7557 -;-;-;-;-;-;-;-;-;- 7675 1 2.104 122294.5 0.8500000238418579 2437 3393 5819 DOHH2_400M_050219_1,5832 DOHH2_400M_050219_1,5832,DEKYMRTGYFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5833 31.812 800.0 61960.0 25 0 3555.8 + -1 ASEQQALHTVQY 12 90 687.8356759843589 1373.6567990355177 2 687.8362304568291 MULTI CID FTMS 0 0 0 5819 115416.7265625 1.0 0 0.0 14 Oxidation (M) _QTTRRFM(Oxidation (M))QQY_ ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188 13.042465956692816 0.6287021003332052 1 QY 2 -1 20.027 0.0 0.0 1.4579 0.0 0.0 1064.5244575821955 0.0 1064.5244575821955 0.0 4.95765318353185 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 QY 1.4579 + + 174 + 1 2.104 38183.7 0.8299999833106995 2438 3393 5819 DOHH2_400M_050219_1,5833 DOHH2_400M_050219_1,5833,QTTRRFMQQY False False ASEQQALHTVQY 31.811813 687.836230456829 575908.875 5819.0 ENSG00000095319|ENST00000372577|NUP188;;nc|ENSG00000095319|Q5SRE5-2|NUP188 4.866855462392171 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5834 31.827 800.0 80340.0 25 0 3982.6 8496 ETDLRNHFY 9 115 597.7806406432308 1193.5467283532614 2 597.7795898318291 MULTI CID FTMS 0 0 0 5819 104587.984375 1.0 0 0.0 15 Unmodified _ETDLRNHFY_ ENSG00000086589|ENST00000199814|RBM22;nc|ENSG00000086589|Q9NW64-2|RBM22 14.838274106304384 0.4350285940865338 1 MH{M(Oxidation (M))|F}Y 4 6 23.188 0.0 0.0 1.9427 0.0 0.0 597.2967396466812 0.0 597.2967396466812 0.0 2.218487496163561 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 MH{M(Oxidation (M))|F}Y 1.9427 - 157 1 2.104 53643.7 0.7900000214576721 2439 3393 5819 DOHH2_400M_050219_1,5834 DOHH2_400M_050219_1,5834,ETDLRNHFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5836 31.839 503.0 176130.0 25 0 11037.0 12858 GVVLLGQF 8 133 416.7516223957021 0 416.7519714236259 PEAK CID FTMS 0 0 0 5835 66491.8515625 0.2134289384119863 2 -0.0774135589599609 1 Unmodified _GVVLLGQF_ ENSG00000030110|ENST00000374467|BAK1 6.354104778181461 0.5763711549229614 1 N 1 8 5.5065 0.0 0.0 0.66224 0.0 0.0 415.2857022115229 299.1412752740844 714.4269774856073 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 N 0.66224 - 13 + 1 2.093 73173.9 1.0 2440 3394 5835 DOHH2_400M_050219_1,5836 DOHH2_400M_050219_1,5836,GVVLLGQF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5837 31.841 61.0 1636600.0 25 0 155970.0 + 24827 MPKLGKARLI 10 111 376.2424018897781 1125.7053762695343 3 376.2422668337822 MULTI CID FTMS 0 0 0 5835 745686.6875 0.6807554653637108 -1 0.123666763305664 2 Unmodified _MPKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 6.2057823575117 0.6979311171683138 1 MPQK{I|L}K 6 -1 40.126 0.0 0.0 3.5645 0.0 0.0 0.0 397.25730310611567 397.25730310611567 16.863044005075736 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 MPQK{I|L}K 3.5645 - 148 + 1 2.093 86580.3 1.0 2441 3394 5835 DOHH2_400M_050219_1,5837 DOHH2_400M_050219_1,5837,MPKLGKARLI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5838 31.842 75.0 582100.0 25 0 52595.0 + 38466 TSDKPLMY 8 73 477.73359840012 953.45264386704 2 477.7336913943291 MULTI CID FTMS 0 0 0 5835 636995.625 1.0 0 0.0 3 Unmodified _TSDKPLMY_ ENSG00000157741|ENST00000473989|UBN2 19.438996006549623 0.6237395211498085 1 MY 2 6 24.464 0.0 0.0 2.5658 0.0 0.0 641.3377584684057 0.0 641.3377584684057 0.0 6.53212513775344 0.0 0.0 0 0.5 0.0 0.0 0.0 + MY 2.5658 + + 44 + 1 2.093 38150.9 1.0 2442 3394 5835 DOHH2_400M_050219_1,5838 DOHH2_400M_050219_1,5838,TSDKPLMY False True TSDKPLMY 31.842465 477.733691394329 3856502.75 5835.0 ENSG00000157741|ENST00000473989|UBN2 4.553682724634807 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5839 31.845 101.0 812500.0 25 0 108920.0 + 37571 TLINHRVL 8 106 483.29823876143865 964.5819245896772 2 483.2980224490166 MULTI CID FTMS 0 0 0 5835 567807.0 0.7396423222795696 -1 0.123666763305664 4 Unmodified _TLINHRVL_ chr3:112130513-112132637|43|20.65|0.44|5.56|-|ENST00000487901|GCSAM,GCSAM;chr3:112130519-112133092|43|17.12|0.46|5.23|-|ENST00000484193|GCSAM,GCSAM;chr3:112132910-112133092|42|13.81|0.3|5.52|-|ENST00000488580|GCSAM,GCSAM;ENSG00000174500|ENST00000308910|GCSAM;ENST00000495418.5_1_3:111842304-111846933:-|nuORF;nc|ENSG00000174500|Q8N6F7-2|GCSAM;nc|ENSG00000174500|Q8N6F7-3|GCSAM 46.020951573049366 0.1579632664462935 1 T{I|L}{I|L}NH 5 3 72.52 0.0 0.0 7.5183 0.0 0.0 0.0 383.2423494928344 383.2423494928344 51.88042558557943 0.0 0.0 0.0 0 0.9076960356474644 2.0 0.0 0.6989700043360187 + T{I|L}{I|L}NH 7.5183 + + 327 + 1 2.093 67192.1 1.0 2443 3394 5835 DOHH2_400M_050219_1,5839 DOHH2_400M_050219_1,5839,TLINHRVL False True TLINHRVL 31.84463 483.298022449017 7651675.5 5835.0 nc|ENSG00000174500|Q8N6F7-3|GCSAM;;ENSG00000174500|ENST00000308910|GCSAM;;ENST00000495418.5_1_3:111842304-111846933:-|nuORF;;nc|ENSG00000174500|Q8N6F7-2|GCSAM;;chr3:112130513-112132637|43|20.65|0.44|5.56|-|ENST00000487901|GCSAM,GCSAM;;chr3:112132910-112133092|42|13.81|0.3|5.52|-|ENST00000488580|GCSAM,GCSAM;;chr3:112130519-112133092|43|17.12|0.46|5.23|-|ENST00000484193|GCSAM,GCSAM 3.664530992507935 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5840 31.848 164.0 618020.0 25 0 82911.0 + -1 EEAQIIQRRL 10 82 419.2406124657247 418.2333359991247 1 419.2418395876884 MULTI CID FTMS 0 0 0 5835 260466.6875 0.5859380365795542 -2 0.2104663848876953 5 ENSG00000132467|ENST00000254803|UTP3 1 [AG]AE 4 -1 12.698 0.0 0.0 3.0362 0.0 0.0 0.0 87.07126259508092 87.07126259508092 7.922196612541241 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.4247425010840047 0.0 [AG]AE 3.0362 - 20 1 2.093 88064.6 1.0 2444 3394 5835 DOHH2_400M_050219_1,5840 DOHH2_400M_050219_1,5840, False False EEAQIIQRRL 31.847842 419.241839587688 1886866.75 5835.0 ENSG00000132467|ENST00000254803|UTP3 1.2692794005076091 3.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5841 31.853 308.0 415430.0 25 0 102300.0 + 38413 TRGPVVRL 8 102 449.2852149040688 896.5558768749377 2 449.2847167849541 MULTI CID FTMS 0 0 0 5835 236493.125 0.764103228419893 -1 0.123666763305664 6 Unmodified _TRGPVVRL_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 17.11289562659939 0.6581031263288403 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RP]VR{I|L} 7 2 + 28.367 0.0 0.0 3.164 3.164 79.616 0.0 0.0 0.0 5.620087715740695 13.282566747036752 5.620087715740695 9.330532103693862 0 0.6923877696554315 0.0 0.0 0.5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RP]VR{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RP]V[VG]{I|L};[TP]RRV[VG]{I|L} 3.164;2.1233;0.10125 -;-;- 58 1 2.093 104586.4 1.0 2445 3394 5835 DOHH2_400M_050219_1,5841 DOHH2_400M_050219_1,5841,TRGPVVRL False True TRGPVVRL 31.853461 449.284716784954 1533647.25 5835.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 2.0910123189290366 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5842 31.859 296.0 353790.0 25 0 33837.0 + 398 AEDSVMDHHF 10 127 594.2426816852591 1186.470810437318 2 594.2430908083916 MULTI CID FTMS 0 0 0 5835 207096.234375 0.8395690466628576 -1 0.123666763305664 7 Unmodified _AEDSVMDHHF_ ENSG00000142864|ENST00000361219|SERBP1;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51-4|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1 96.28474662873226 0.0088832290995439 1 {[CP]|[EA]}DSVMDHH{M(Oxidation (M))|F} 10 0 {[CP]|[EA]} + + 70.928 3.7236 1.8611 5.978 5.978 60.241 0.0 0.0 0.0 0.0 37.562893943202624 0.0 0.0 0 1.1549471895720984 0.0 1.5044321917401078 0.0 + + {[CP]|[EA]}DSVMDHH{M(Oxidation (M))|F} 5.978 + + 1987 + 1 2.093 83946.1 1.0 2446 3394 5835 DOHH2_400M_050219_1,5842 DOHH2_400M_050219_1,5842,AEDSVMDHHF True True AEDSVMDHHF 31.858896 594.243090808392 1360020.25 5835.0 nc|ENSG00000142864|Q8NC51-2|SERBP1;;nc|ENSG00000142864|Q8NC51|SERBP1;;nc|ENSG00000142864|Q8NC51-4|SERBP1;;ENSG00000142864|ENST00000361219|SERBP1 9.233468373616535 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5843 31.863 240.0 458890.0 25 0 149970.0 + 6751 EDRLVNEKF 9 97 383.8680344492837 0 383.8679382205009 PEAK CID FTMS 0 0 0 5835 203551.046875 0.8619569243424166 -1 0.123666763305664 8 Unmodified _EDRLVNEKF_ ENSG00000184640|ENST00000427177|SEPTIN9;ENST00000586456.1_1_17:75486911-75493449:+|nuORF;ENST00000592481.5_1_17:75447336-75492345:+|nuORF;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;nc|ENSG00000184640|Q9UHD8-3|SEPTIN9;nc|ENSG00000184640|Q9UHD8-4|SEPTIN9;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9;nc|ENSG00000184640|Q9UHD8-8|SEPTIN9;nc|ENSG00000184640|Q9UHD8-9|SEPTIN9 12.872603262515298 0.2793198337502027 1 V{I|L} 2 8 9.464 0.0 0.0 1.236 0.0 0.0 171.40817475618604 379.1379793756469 550.546154131833 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L} 1.236 - 29 + 1 2.093 93510.8 1.0 2447 3394 5835 DOHH2_400M_050219_1,5843 DOHH2_400M_050219_1,5843,EDRLVNEKF False True EDRLVNEKF 31.863373 383.867938220501 1515516.625 5835.0 nc|ENSG00000184640|Q9UHD8-3|SEPTIN9;;ENST00000586456.1_1_17:75486911-75493449:+|nuORF;;ENST00000592481.5_1_17:75447336-75492345:+|nuORF;;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;;ENSG00000184640|ENST00000427177|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-4|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-8|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-9|SEPTIN9 2.5605655113856 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5844 31.87 364.0 384790.0 25 0 37900.0 13451 HLREWYIS 8 111 552.2869246453903 1102.5592963575805 2 552.2872802615166 MULTI CID FTMS 0 0 0 5835 193148.96875 0.6584552851418082 -3 0.3452472686767578 9 Unmodified _HLREWYIS_ ENSG00000163827|ENST00000395905|LRRC2 50.855029805455786 0.1352255786796883 1 H{I|L}MVAG{I|L}TC 9 6 83.313 0.0 0.0 7.5563 0.0 0.0 0.0 174.10431848697502 174.10431848697502 69.3333015625524 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 1.5669015600442575 0.0 H{I|L}MVAG{I|L}TC 7.5563 - 561 + 1 2.093 110373.8 1.0 2448 3394 5835 DOHH2_400M_050219_1,5844 DOHH2_400M_050219_1,5844,HLREWYIS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5845 31.871 59.0 772500.0 25 0 69878.0 + 2548 ASEPSAQLSY 10 80 526.7480340795806 1051.4815152259612 2 526.7483398318291 MULTI CID FTMS 0 0 0 5835 662831.375 0.8046809930960261 -4 0.4238185882568359 10 Unmodified _ASEPSAQLSY_ ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;nc|ENSG00000131558|Q96A65-2|EXOC4 19.256988751693697 0.5244284437930726 1 {I|L}QA{[QG]|[NA]}SY 7 6 27.629 0.0 0.0 2.6276 0.0 0.0 286.11061786443616 0.0 286.11061786443616 0.0 2.825133928732175 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.0 {I|L}QA{[QG]|[NA]}SY 2.6276 - 162 + 1 2.093 41675.1 1.0 2449 3394 5835 DOHH2_400M_050219_1,5845 DOHH2_400M_050219_1,5845,ASEPSAQLSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5846 31.875 192.0 342220.0 25 0 27533.0 + 29878 QRKERLYPL 9 83 401.5717066270407 1201.6932904813225 3 401.5716430544853 MULTI CID FTMS 0 0 0 5835 218870.546875 0.9289180225765892 1 -0.0483837127685546 11 Unmodified _QRKERLYPL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000373570.8_1_9:127620199-127620799:-|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF 12.174745833636583 0.5071271664557081 1 {I|L}YP{I|L} 4 5 33.928 0.0 0.0 2.8233 0.0 0.0 697.3997503380582 0.0 697.3997503380582 0.0 22.501225267834 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}YP{I|L} 2.8233 + + 48 1 2.093 53965.2 1.0 2450 3394 5835 DOHH2_400M_050219_1,5846 DOHH2_400M_050219_1,5846,QRKERLYPL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5848 31.88 23.0 1839500.0 25 0 289580.0 + 16109 ITSSAVTTALK 11 65 546.3188592614249 1090.6231655896495 2 546.3190795779228 MULTI CID FTMS 0 0 0 5847 1931111.125 0.1369457844329331 2 -0.0397548675537109 1 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 35.079672537005266 0.2881911524121513 1 {I|L}TSSAVTTA{I|L}K 11 0 + 95.669 0.0 0.0 8.7719 8.7719 97.34 0.0 0.0 0.0 73.62054474984504 12.060323256818222 12.060323256818222 22.31608586905513 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}TSSAVTTA{I|L}K;{I|L}TS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TTA{I|L}K 8.7719;6.7258 +;- + 111 + 1 2.093 36297.1 1.0 2451 3395 5847 DOHH2_400M_050219_1,5848 DOHH2_400M_050219_1,5848,ITSSAVTTALK False True ITSSAVTTALK 31.879659 546.319079577923 191747964.0 5847.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 9.251785278320312 2.0 True 11.0 False splicing PXD020620_cell_line DOHH2_400M_050219_1 5849 31.893 800.0 208990.0 25 0 18770.0 + 10424 FTDGITRTY 9 141 537.2668967461661 1072.5192405591322 2 537.2682372927666 MULTI CID FTMS 0 0 0 5847 151980.671875 0.7935723398341168 1 -0.0290298461914062 2 Unmodified _FTDGITRTY_ ENST00000294309.7_2_11:68821527-68822650:+|nuORF 76.82478488871298 0.0184607444814265 1 {M(Oxidation (M))|F}TDG{I|L}TRTY 9 0 + 79.537 0.0 0.0 7.4159 7.4159 95.791 0.0 0.0 0.0 57.85457533920862 13.46787486224656 13.46787486224656 24.49723502511297 0 1.086696871556164 0.0 0.7614393726401688 0.2742275032520141 + + {M(Oxidation (M))|F}TDG{I|L}TRTY;{M(Oxidation (M))|F}TDG{I|L}[YK]{[ET]|[MV]};{[MG]|[TS]}[H{I|L}]T{I|L}GDTE;{[TV]|[{I|L}S]}[HT]T{I|L}GDTE;{M(Oxidation (M))|F}T{[RE]|[WV]}TRTY;[{I|L}T][HS]T{I|L}GDTE;{M(Oxidation (M))|F}TDG{I|L}T[HS]VP;{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TRTY;{[DA]|[EG]}[K{I|L}][QP]GDTE;[VS][Q{I|L}][QP]GDTE 7.4159;5.1318;4.9855;4.9671;4.686;4.6699;4.5699;4.3311;3.3403;3.3188 +;-;-;-;-;-;-;-;-;- + 676 + 1 2.093 130184.1 0.800000011920929 2452 3395 5847 DOHH2_400M_050219_1,5849 DOHH2_400M_050219_1,5849,FTDGITRTY True True FTDGITRTY 31.893492 537.268237292767 1039270.875 5847.0 ENST00000294309.7_2_11:68821527-68822650:+|nuORF 6.542092800140381 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5850 31.895 22.0 3886000.0 25 0 246850.0 + 29410 QLEDGRTLSDY 11 83 648.8069009380474 1295.5992489428947 2 648.8071777224541 MULTI CID FTMS 0 0 0 5847 2523326.75 0.1585217029446729 -4 0.3936309814453125 3 Unmodified _QLEDGRTLSDY_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF 78.06048673739656 0.0090990320965632 1 [AG]ANS{I|L}T[DV]N[TA]Y 13 11 + 67.415 0.0 0.0 5.2034 5.2034 86.74 0.0 0.0 0.0 28.003766653539543 7.043069657090967 7.043069657090967 11.413291527964688 0 0.6109243748081782 1.0969100130080565 0.3807196863200844 0.3054621874040891 [AG]ANS{I|L}T[DV]N[TA]Y;[AG]ANS{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}W[TA]Y;[TP]DS{I|L}T[DV]N[TA]Y;[TP]DS{I|L}TAAW[TA]Y;[TP]DS{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}W[TA]Y 5.2034;4.3225;3.5305;3.1622;2.6519 -;-;-;-;- 459 + 1 2.093 68299.1 1.0 2453 3395 5847 DOHH2_400M_050219_1,5850 DOHH2_400M_050219_1,5850,QLEDGRTLSDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5851 31.899 228.0 529940.0 25 0 68894.0 + 659 AELTPHQTF 9 121 522.2612465253337 1042.5079401174671 2 522.2612182497978 MULTI CID FTMS 0 0 0 5847 259126.234375 0.6383308374757538 2 -0.0397548675537109 4 Unmodified _AELTPHQTF_ ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2 43.77239144664712 0.0547478964384323 1 {[CP]|[EA]}{I|L}TPH[QT]{M(Oxidation (M))|F} 9 0 + 37.358 0.0 0.0 3.5834 3.5834 82.194 0.0 0.0 0.0 24.169985483605807 9.597575022706684 9.597575022706684 14.113561256123717 0 0.7134679910804405 0.0 1.089136830878453 0.0 + + {[CP]|[EA]}{I|L}TPH[QT]{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}TPH{[NV]|[RG]}Y;{[CP]|[EA]}{I|L}TPH[YN]V;{[CP]|[EA]}{I|L}[HA][HT]KH;{[CP]|[EA]}{I|L}[EP][YG]KH;{[CP]|[EA]}{I|L}[EP]WW{I|L} 3.5834;2.2296;2.0542;0.83731;0.086635;0.02022 +;-;-;-;-;- + 232 + 1 2.093 97820.1 1.0 2454 3395 5847 DOHH2_400M_050219_1,5851 DOHH2_400M_050219_1,5851,AELTPHQTF True True AELTPHQTF 31.898961 522.2621 2797961.0 5847.0 ENSG00000118705|ENST00000237530|RPN2;;nc|ENSG00000118705|P04844-2|RPN2 8.885052839914957 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5852 31.904 279.0 471570.0 25 0 35508.0 + 32971 SEMAGPPQM 9 127 474.2014107058764 946.3882684785528 2 474.2021057009697 MULTI CID FTMS 0 0 0 5847 216797.671875 0.2515874520571274 -4 0.3936309814453125 5 Unmodified _SEMAGPPQM_ ENSG00000174231|ENST00000304992|PRPF8 88.90359156742426 0.0153595091083554 1 {[ES]|[DT]|[{I|L}C]}MAGPPQM 9 0 {[ES]|[DT]|[{I|L}C]}MA + + 40.692 14.969 3.5797 4.2998 4.2998 54.122 0.0 0.0 0.0 0.0 15.797873977753252 0.0 0.0 0 0.9947026752325154 0.0 0.0 0.8807196863200843 + + {[ES]|[DT]|[{I|L}C]}MAGPPQM 4.2998 + + 395 + 1 2.093 104975.8 1.0 2455 3395 5847 DOHH2_400M_050219_1,5852 DOHH2_400M_050219_1,5852,SEMAGPPQM True True SEMAGPPQM 31.90409 474.20210570097 11106652.0 5847.0 ENSG00000174231|ENST00000304992|PRPF8 8.118168036142984 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5854 31.909 5.7 8552400.0 25 0 518820.0 + 28448 PTDPKVVVY 9 71 509.2842510113492 1016.5539490894984 2 509.2846252322197 MULTI CID FTMS 0 0 0 5853 9674529.0 1.0 0 0.0 1 Unmodified _PTDPKVVVY_ ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;nc|ENSG00000112297|Q9Y4K1-2|CRYBG1 45.69961567697781 0.0497987121815769 1 [TP]D[KP]VVVY 9 0 + 62.681 0.0 0.0 6.166 6.166 89.376 0.0 0.0 0.0 9.254602876638032 14.973024840566469 9.254602876638032 9.254602876638032 0 1.305462187404089 1.3010299956639813 0.7742275032520141 0.0 + + [TP]D[KP]VVVY;[KP]VDTPVVY;[TP][Q{I|L}]TPVVY;[KP]VDTVPVY;[KP]VVDTPVY;[TP][Q{I|L}]TVPVY;VV[KP]DTPVY;[KP]VDVTPVY;[TP][Q{I|L}]VTPVY 6.166;5.2557;5.065;4.3685;4.216;4.1778;4.0998;3.9675;3.7769 +;-;-;-;-;-;-;-;- + 272 1 2.093 45874.9 1.0 2456 3396 5853 DOHH2_400M_050219_1,5854 DOHH2_400M_050219_1,5854,PTDPKVVVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5855 31.915 336.0 449490.0 25 0 32506.0 + 20229 LLDEHHISY 9 137 563.7799388201113 1125.5453247070225 2 563.7801391482353 MULTI CID FTMS 0 0 0 5853 195210.65625 0.0824887754096298 3 -0.1135520935058593 2 Unmodified _LLDEHHISY_ ENSG00000100014|ENST00000314328|SPECC1L;nc|ENSG00000100014|Q69YQ0-2|SPECC1L 74.19965305603844 0.0194755241623067 1 {I|L}{I|L}DEHH{I|L}SY 9 0 + 69.654 0.0 0.0 6.1884 6.1884 91.55 0.0 0.0 0.0 36.51320084331596 14.97302484056646 14.97302484056646 15.805300040193003 0 1.8226825097560424 2.0 0.2887254899964357 0.0 + + {I|L}{I|L}DEHH{I|L}SY;{I|L}{I|L}DEHHYS{I|L};{I|L}{I|L}[HM]{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{I|L}{I|L}DEHH{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{I|L}{I|L}DMM{I|L}{I|L}DY;{I|L}{I|L}DQQ{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{I|L}[HM]{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{I|L}{I|L}D[YV]YH{[CT]|[{M(Oxidation (M))|F}G]};[HM]{I|L}{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{NN|[MP]|[D{I|L}]|[EV]}Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 6.1884;4.7842;4.291;3.4406;3.0303;2.4144;2.3816;2.1015;1.9601;1.8263 +;-;-;+;-;-;-;-;-;- + 568 + 1 2.093 116023.3 1.0 2457 3396 5853 DOHH2_400M_050219_1,5855 DOHH2_400M_050219_1,5855,LLDEHHISY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5857 31.921 145.0 513600.0 25 0 55073.0 + 35359 STDPREALQY 10 90 590.2856427094841 1178.5567324857682 2 590.2850219607353 MULTI CID FTMS 0 0 0 5856 421928.625 0.2506810789100925 -3 0.0881385803222656 1 Unmodified _STDPREALQY_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 40.23920728925047 0.1550410903091231 1 EA{I|L}[CS]{I|L}QY 8 7 37.115 0.0 0.0 3.1492 0.0 0.0 253.1547108380875 0.0 253.1547108380875 0.0 20.12578788640525 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 EA{I|L}[CS]{I|L}QY 3.1492 - 227 1 2.089 65500.8 1.0 2458 3397 5856 DOHH2_400M_050219_1,5857 DOHH2_400M_050219_1,5857,STDPREALQY False True STDPREALQY 31.921481 590.285021960735 24713992.0 5856.0 nc|ENSG00000102900|Q8N1F7-2|NUP93;;ENSG00000102900|ENST00000308159|NUP93 4.994753519694011 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5858 31.925 153.0 478210.0 25 0 27218.0 + 29000 QEAASLLGKKY 11 103 403.2278341104318 1206.661672931495 3 403.2275878787041 MULTI CID FTMS 0 0 0 5856 296894.78125 0.961450527760692 -1 0.0107250213623046 2 Unmodified _QEAASLLGKKY_ ENSG00000132780|ENST00000350030|NASP;ENST00000464190.6_1_1:46049764-46072280:+|nuORF;ENST00000534101.1_1_1:46049764-46072228:+|nuORF;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP 16.565877749689598 0.6905575015977202 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AA{[TV]|[{I|L}S]}{I|L}GKKY 11 0 + 32.897 0.0 0.0 2.7263 2.7263 74.835 0.0 0.0 0.0 20.690772941118333 11.804560644581317 11.804560644581317 6.989700043360188 0 0.0 0.0 0.0 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AA{[TV]|[{I|L}S]}{I|L}GKKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AA[{I|L}V]TGKKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WR]{I|L}GKKY;[NP]{I|L}{I|L}G{I|L}{[TV]|[{I|L}S]}A{M(Oxidation (M))|F}Y 2.7263;2.147;1.8895;0.3764 +;-;-;- + 189 + 1 2.089 60960.8 1.0 2459 3397 5856 DOHH2_400M_050219_1,5858 DOHH2_400M_050219_1,5858,QEAASLLGKKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5859 31.927 116.0 539970.0 25 0 24446.0 + 33166 SEYDRGVNTF 10 96 594.2699937223484 1186.5254345114968 2 594.2703124880791 MULTI CID FTMS 0 0 0 5856 244181.703125 0.1552974933825082 -3 0.0881385803222656 3 Unmodified _SEYDRGVNTF_ ENSG00000143106|ENST00000271308|PSMA5;ENST00000484563.1_1_1:109955653-109968973:-|nuORF 47.7319792270244 0.0934623409360514 1 {[QS]|[NT]}{M(Oxidation (M))|F}M[DV]VNT{M(Oxidation (M))|F} 10 5 + 45.724 0.0 0.0 3.8536 3.8536 73.225 0.0 0.0 0.0 2.8258344212375164 3.010851361097231 2.8258344212375164 2.8258344212375164 0 0.8494850021680094 0.958607314841775 0.0 0.2059771852360797 {[QS]|[NT]}{M(Oxidation (M))|F}M[DV]VNT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}ETGGVNT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}VSV[MD]HH{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}ETNVNT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}ETGRNT{M(Oxidation (M))|F};{[QS]|[NT]}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]RNT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[WT]|[RM]}GVNT{M(Oxidation (M))|F};{[QS]|[NT]}{M(Oxidation (M))|F}M[DV]VGGT{M(Oxidation (M))|F};{[QS]|[NT]}[YN]TGGVNT{M(Oxidation (M))|F};{[QS]|[NT]}[YN]TNVNT{M(Oxidation (M))|F} 3.8536;3.6154;3.5999;3.5687;3.315;3.3031;3.1317;3.0812;3.0108;2.964 -;-;-;-;-;-;-;-;-;- 2125 1 2.089 50844.7 1.0 2460 3397 5856 DOHH2_400M_050219_1,5859 DOHH2_400M_050219_1,5859,SEYDRGVNTF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5860 31.94 771.0 161440.0 25 0 15240.0 + 41053 VMLAKHVI 8 155 455.7796998739488 0 455.7796813845634 PEAK CID FTMS 0 0 0 5856 96452.125 1.0 0 0.0 4 Unmodified _VMLAKHVI_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 40.44857923139169 0.1366842323899322 1 M{I|L}AKH 5 3 15.305 0.0 0.0 1.6827 0.0 0.0 99.06347799872611 227.1409700983032 326.2044480970293 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + M{I|L}AKH 1.6827 + + 163 + 1 2.089 99507.0 1.0 2461 3397 5856 DOHH2_400M_050219_1,5860 DOHH2_400M_050219_1,5860,VMLAKHVI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5861 31.954 800.0 183540.0 25 0 44670.0 + 6820 EEAQIIQRRL 10 126 628.3590860716417 1254.7036192100834 2 628.3600952029228 MULTI CID FTMS 0 0 0 5856 140360.625 1.0 0 0.0 5 Unmodified _EEAQIIQRRL_ ENSG00000132467|ENST00000254803|UTP3 38.17557092003332 0.1768326257063233 1 EE 2 8 32.735 0.0 0.0 2.609 0.0 0.0 0.0 993.5987023061772 993.5987023061772 7.51393987558032 0.0 0.0 0.0 0 0.3807196863200844 1.0969100130080565 0.0 0.0 + EE 2.609 + + 155 + 1 2.089 111334.3 0.7099999785423279 2462 3397 5856 DOHH2_400M_050219_1,5861 DOHH2_400M_050219_1,5861,EEAQIIQRRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5862 31.968 800.0 150650.0 25 0 10955.0 25864 NLFEEQERQER 11 140 739.3558062664424 1476.6970595996847 2 739.3550903201103 MULTI CID FTMS 0 0 0 5856 107334.5 0.3677250674033364 -3 0.0881385803222656 6 Unmodified _NLFEEQERQER_ ENSG00000135148|ENST00000412615|TRAFD1 22.65808497894818 0.560183898709508 1 {[QV]|[N{I|L}]|[RA]|[KV]}NADQ 6 8 66.705 0.0 0.0 4.5171 0.0 0.0 0.0 818.3820284479124 818.3820284479124 18.50756462942641 0.0 0.0 0.0 0 1.3807196863200843 2.0 0.2887254899964357 0.6989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}NADQ 4.5171 - 1630 + 1 2.089 90742.4 0.6200000047683716 2463 3397 5856 DOHH2_400M_050219_1,5862 DOHH2_400M_050219_1,5862,NLFEEQERQER False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5864 31.979 500.0 231160.0 25 0 10251.0 -1 0 144 506.3146944789478 505.3074180123478 1 506.3142272830009 MULTI CID FTMS 0 0 0 5863 43961.04296875 0.0855081689509718 5 -0.4465999603271484 1 1 AP 2 -1 19.068 0.0 0.0 3.7736 0.0 0.0 319.2063265590259 0.0 319.2063265590259 0.0 7.95880017344075 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 AP 3.7736 - 49 + 1 2.089 90934.4 1.0 2464 3398 5863 DOHH2_400M_050219_1,5864 DOHH2_400M_050219_1,5864, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5865 31.981 101.0 546660.0 25 0 74841.0 + 25849 NLDSQRLQY 9 77 568.7891567468848 1135.5637605605696 2 568.7888061404228 MULTI CID FTMS 0 0 0 5863 480884.28125 0.634597210927332 -2 0.063913345336914 2 Unmodified _NLDSQRLQY_ ENSG00000151116|ENST00000396197|UEVLD;nc|ENSG00000151116|Q8IX04-2|UEVLD;nc|ENSG00000151116|Q8IX04-3|UEVLD;nc|ENSG00000151116|Q8IX04-4|UEVLD;nc|ENSG00000151116|Q8IX04-6|UEVLD;nc|ENSG00000151116|Q8IX04-7|UEVLD 57.72198328787511 0.0273433238377839 1 {[QV]|[N{I|L}]|[RA]|[KV]}DSQ 5 4 51.937 0.0 0.0 4.5737 0.0 0.0 0.0 575.2929171197874 575.2929171197874 33.3091592184438 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3252574989159953 0.4247425010840047 + {[QV]|[N{I|L}]|[RA]|[KV]}DSQ 4.5737 + + 73 + 1 2.089 46770.5 1.0 2465 3398 5863 DOHH2_400M_050219_1,5865 DOHH2_400M_050219_1,5865,NLDSQRLQY True True NLDSQRLQY 31.98135 568.788806140423 4255633.5 5863.0 nc|ENSG00000151116|Q8IX04-6|UEVLD;;nc|ENSG00000151116|Q8IX04-7|UEVLD;;ENSG00000151116|ENST00000396197|UEVLD;;nc|ENSG00000151116|Q8IX04-3|UEVLD;;nc|ENSG00000151116|Q8IX04-4|UEVLD;;nc|ENSG00000151116|Q8IX04-2|UEVLD 7.579876899719238 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5866 31.983 87.0 622910.0 25 0 50798.0 + 31836 RTEEGPTLSY 10 83 576.7807055296574 1151.5468581261148 2 576.7814819216728 MULTI CID FTMS 0 0 0 5863 353629.96875 0.5445223009930319 -2 0.063913345336914 3 Unmodified _RTEEGPTLSY_ ENSG00000015479|ENST00000394805|MATR3 32.037481411007896 0.2488723560272515 1 {[TV]|[{I|L}S]}WEG[TP]{I|L}SY 10 2 + 40.399 0.0 0.0 3.5082 3.5082 81.107 0.0 0.0 0.0 0.791812460476244 23.40919721324952 0.791812460476244 11.00833760139686 0 0.5 0.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}WEG[TP]{I|L}SY;{[TV]|[{I|L}S]}WEG{[VA]|[{I|L}G]}{I|L}DY;{[TV]|[{I|L}S]}WE{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DY;{[TV]|[{I|L}S]}WEG{[VA]|[{I|L}G]}PMY;{[TV]|[{I|L}S]}WEG[PG]{I|L}MY;EE[WK][TP]{I|L}SY;{[TV]|[{I|L}S]}WE{[QV]|[N{I|L}]|[RA]|[KV]}PMY;{[TV]|[{I|L}S]}WE[NP]{I|L}MY;EE[WK]{[VA]|[{I|L}G]}{I|L}DY;EE[WK]{[VA]|[{I|L}G]}PMY 3.5082;2.5523;2.2464;2.0294;1.9209;1.7911;1.7236;1.6151;0.83513;0.3123 -;-;-;-;-;-;-;-;-;- 189 1 2.089 44703.0 1.0 2466 3398 5863 DOHH2_400M_050219_1,5866 DOHH2_400M_050219_1,5866,RTEEGPTLSY False True RTEEGPTLSY 31.983304 576.781481921673 3803989.75 5863.0 ENSG00000015479|ENST00000394805|MATR3 7.118797938028972 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5867 31.989 300.0 317210.0 25 0 22988.0 + 356 AEAVSTRW 8 117 460.2347238722573 918.4548948113146 2 460.2349120974541 MULTI CID FTMS 0 0 0 5863 202889.390625 1.0 0 0.0 4 Unmodified _AEAVSTRW_ ENSG00000102387|ENST00000356784|TAF7L;ENSG00000178913|ENST00000313368|TAF7;nc|ENSG00000102387|Q5H9L4-3|TAF7L;nc|ENSG00000102387|Q5H9L4|TAF7L 21.53697664764585 0.591232569029014 1 {[CP]|[EA]}AV[RN]{I|L}{M(Oxidation (M))|F} 8 4 + 35.623 0.0 0.0 3.8785 3.8785 75.515 0.0 0.0 0.0 6.989700043360188 4.555912674110019 4.555912674110019 4.555912674110019 0 0.9247425010840048 0.0 0.0 0.0 {[CP]|[EA]}AV[RN]{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}A{[MG]|[TS]}VRW;{[CP]|[EA]}AVSTRW;{[CP]|[EA]}AV[RN]{M(Oxidation (M))|F}{I|L};{[CP]|[EA]}AVW[KC]{I|L};{[CP]|[EA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VRW;{[CP]|[EA]}[Y{I|L}][RN][PG] 3.8785;3.3825;3.3227;2.814;2.4862;2.1402;0.12882 -;-;+;-;-;-;- + 203 + 1 2.089 74541.6 1.0 2467 3398 5863 DOHH2_400M_050219_1,5867 DOHH2_400M_050219_1,5867,AEAVSTRW False True AEAVSTRW 31.988783 460.234912097454 1007871.125 5863.0 nc|ENSG00000102387|Q5H9L4|TAF7L;;ENSG00000102387|ENST00000356784|TAF7L;;ENSG00000178913|ENST00000313368|TAF7;;nc|ENSG00000102387|Q5H9L4-3|TAF7L 4.5262451171875 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5868 31.993 203.0 319660.0 25 0 31223.0 + 4484 DAYDRPEL 8 102 489.7295497409882 977.4445465487764 2 489.7301513552666 MULTI CID FTMS 0 0 0 5863 164711.515625 1.0 0 0.0 5 Unmodified _DAYDRPEL_ ENSG00000176986|ENST00000345254|SEC24C 25.399314129420983 0.5099049743284904 1 {[DA]|[EG]}YDR[EP]{I|L} 8 0 + 43.638 0.0 0.0 4.4645 4.4645 85.554 0.0 0.0 0.0 31.16373455765242 1.7710814827263732 1.7710814827263732 17.501225267834 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + + {[DA]|[EG]}YDR[EP]{I|L};{[DA]|[EG]}Y{[SA]|[TG]}[HT]T{I|L} 4.4645;2.674 +;- + 62 + 1 2.089 56917.4 1.0 2468 3398 5863 DOHH2_400M_050219_1,5868 DOHH2_400M_050219_1,5868,DAYDRPEL False True DAYDRPEL 31.992648 489.730151355267 817525.5 5863.0 ENSG00000176986|ENST00000345254|SEC24C 7.860074996948242 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5869 31.997 228.0 653210.0 25 0 49330.0 + 13760 HSDPESDFY 9 137 548.7146615036318 1095.4147700740634 2 548.7151977419853 MULTI CID FTMS 0 0 0 5863 158381.796875 0.2116533248942906 -3 0.0929431915283203 6 Unmodified _HSDPESDFY_ ENSG00000119760|ENST00000337768|SUPT7L;nc|ENSG00000119760|O94864-2|SUPT7L 64.23631603340823 0.0237365939569086 1 [HS]DPESD{M(Oxidation (M))|F}Y 9 0 + 58.215 0.0 0.0 5.3144 5.3144 77.911 0.0 0.0 0.0 2.632414347745815 14.973024840566469 2.632414347745815 2.632414347745815 0 0.7614393726401688 0.0 1.4559771852360797 0.0 + + [HS]DPESD{M(Oxidation (M))|F}Y;{[DS]|[MA]|[CV]|TT}HPESD{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YC(Carbamidomethyl (C))]SD{M(Oxidation (M))|F}Y;[TP]DDHSD{M(Oxidation (M))|F}Y;[HS]{[CT]|[{M(Oxidation (M))|F}G]}HSD{M(Oxidation (M))|F}Y;{[DS]|[MA]|[CV]|TT}[EP]HSD{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[DS]|[MA]|[CV]|TT}ESD{M(Oxidation (M))|F}Y;{[ET]|[MV]}S[{M(Oxidation (M))|F}T]SD{M(Oxidation (M))|F}Y;[HS]D{[CT]|[{M(Oxidation (M))|F}G]}[HS]{M(Oxidation (M))|F}Y;[QA]EDS{[HG]|PP}[CS]Y 5.3144;5.0741;4.5852;4.098;4.0941;3.8537;3.3781;2.744;2.1669;2.12 +;-;-;-;-;-;-;-;-;- + 441 1 2.089 111354.5 1.0 2469 3398 5863 DOHH2_400M_050219_1,5869 DOHH2_400M_050219_1,5869,HSDPESDFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5870 32.011 800.0 218030.0 25 0 14177.0 -1 PVCKLRKLI 9 163 563.8594365104102 1125.7043200876203 2 563.8600341677666 MULTI CID FTMS 0 0 0 5863 136636.359375 0.6293048457913916 2 -0.1146602630615234 7 Carbamidomethyl (C) _PVC(Carbamidomethyl (C))KLRKLI_ ENSG00000185792|ENST00000332836|NLRP9;nc|ENSG00000185792|Q7RTR0-2|NLRP9 20.453626601364224 0.2830276176381075 1 MPQK{I|L}K[R{I|L}]{I|L} 9 -1 + 70.058 0.0 0.0 6.2235 6.2235 89.487 0.0 0.0 0.0 47.24919680330524 2.9318250140072166 2.9318250140072166 9.208187539523756 0 1.4698565171985374 1.154901959985743 0.0 0.4247425010840047 MPQK{I|L}K[R{I|L}]{I|L};MP[AG]K{I|L}K[R{I|L}]{I|L} 6.2235;5.4055 -;- 1262 + 1 2.089 133867.2 0.6299999952316284 2470 3398 5863 DOHH2_400M_050219_1,5870 DOHH2_400M_050219_1,5870,PVCKLRKLI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5871 32.018 378.0 238510.0 25 0 25798.0 9544 FLGMHPCE 8 108 467.2012527028798 932.3879524725596 2 467.2010070681572 MULTI CID FTMS 0 0 0 5863 90221.265625 0.6331325910881233 -1 0.0531883239746093 8 Unmodified _FLGMHPCE_ ENSG00000181789|ENST00000314797|COPG1 20.871210003555333 0.6025813472596342 1 E{I|L}E 3 6 31.995 0.0 0.0 3.4315 0.0 0.0 543.1961537091812 0.0 543.1961537091812 0.0 19.230574646156064 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.0 E{I|L}E 3.4315 - 95 1 2.089 74124.1 1.0 2471 3398 5863 DOHH2_400M_050219_1,5871 DOHH2_400M_050219_1,5871,FLGMHPCE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5873 32.023 169.0 467190.0 25 0 55351.0 + 15975 ITDIVNKY 8 101 483.269283580534 964.524014227868 2 483.2701904177666 MULTI CID FTMS 0 0 0 5872 162911.546875 0.7947624979123489 -1 0.0496387481689453 1 Unmodified _ITDIVNKY_ ENSG00000170471|ENST00000262879|RALGAPB;ENST00000490114.1_1_20:37202892-37204542:+|nuORF;nc|ENSG00000170471|Q86X10-2|RALGAPB;nc|ENSG00000170471|Q86X10-3|RALGAPB 43.85829265575387 0.1697421968005898 1 {I|L}TD{I|L}VNKY 8 0 + 58.64 0.0 0.0 6.0797 6.0797 89.248 0.0 0.0 0.0 35.90466417162215 10.810935890735216 10.810935890735216 9.262137858390815 0 0.5 2.0 0.0 0.0 + + {I|L}TD{I|L}VNKY;{I|L}TD{I|L}VGGKY;{I|L}T[YN][WR]{I|L};{I|L}T[YN]S[RV]{I|L};[QP][TP]V{I|L}D[VP] 6.0797;5.1194;2.1676;2.0254;0.67909 +;-;-;-;- + 240 + 1 2.089 67914.1 1.0 2472 3399 5872 DOHH2_400M_050219_1,5873 DOHH2_400M_050219_1,5873,ITDIVNKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5874 32.037 800.0 188220.0 25 0 11594.0 + 29001 QEAASLLGKKY 11 166 604.3365491773822 1206.6585454215642 2 604.3367187380791 MULTI CID FTMS 0 0 0 5872 56218.8125 0.3815206369245611 1 -0.0650215148925781 2 Unmodified _QEAASLLGKKY_ ENSG00000132780|ENST00000350030|NASP;ENST00000464190.6_1_1:46049764-46072280:+|nuORF;ENST00000534101.1_1_1:46049764-46072228:+|nuORF;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP 39.21299971606389 0.2245192836502623 1 QEAAS{I|L}{I|L}GKKY 11 0 + 73.684 0.0 0.0 6.1065 6.1065 86.217 0.0 0.0 0.0 13.319791320230747 7.7815125038364386 7.7815125038364386 7.7815125038364386 0 0.3054621874040891 1.0969100130080565 0.0 0.0 + + QEAAS{I|L}{I|L}GKKY;QEAAS{I|L}{I|L}GKYK;QE[QT]{I|L}{I|L}GKKY;QE[WR]{I|L}GKKY;QE[QT]{I|L}{I|L}GKYK;QE[WR]{I|L}GKYK;QEA[RK]{[RE]|[WV]}KY;Q[RD]S{I|L}{I|L}GKKY;Q[QA]KG{[CP]|[EA]}GKKY;Q[KA]KG{[CP]|[EA]}GKKY 6.1065;5.4616;4.5065;4.3606;3.8616;3.7157;3.3859;3.3443;3.1641;3.1641 +;-;-;-;-;-;-;-;-;- + 1001 + 1 2.089 107707.5 0.6700000166893005 2473 3399 5872 DOHH2_400M_050219_1,5874 DOHH2_400M_050219_1,5874,QEAASLLGKKY False True QEAASLLGKKY 32.037122 604.336718738079 2206425.25 5872.0 nc|ENSG00000132780|P49321-2|NASP;;ENSG00000132780|ENST00000350030|NASP;;ENST00000534101.1_1_1:46049764-46072228:+|nuORF;;ENST00000464190.6_1_1:46049764-46072280:+|nuORF;;nc|ENSG00000132780|P49321-3|NASP 7.077063083648682 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5875 32.04 148.0 589590.0 25 0 43412.0 + 4127 DAPAHHLF 8 104 454.2247690021675 906.434985071135 2 454.2247192263603 MULTI CID FTMS 0 0 0 5872 292912.65625 0.1572467578987716 -2 0.1028270721435546 3 Unmodified _DAPAHHLF_ ENSG00000135372|ENST00000257829|NAT10;ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000135372|Q9H0A0-2|NAT10;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8 56.04830969593885 0.114297258605095 1 DAPAHH{I|L}{M(Oxidation (M))|F} 8 0 + 81.139 0.0 0.0 8.9515 8.9515 98.287 0.0 0.0 0.0 48.28585986251227 14.904630595263413 14.904630595263413 34.15205560610346 0 0.805462187404089 2.0 0.0 0.0 + + DAPAHH{I|L}{M(Oxidation (M))|F};W{M(Oxidation (M))|F}{[SA]|[TG]}H{I|L}{M(Oxidation (M))|F};DA[YV][RH]{M(Oxidation (M))|F};DA{M(Oxidation (M))|F}[HV][YR];WPA{[QS]|[NT]}[YR];D[HV]{I|L}H{[WT]|[RM]};{[CT]|[{M(Oxidation (M))|F}G]}{[WT]|[RM]}H{I|L}{M(Oxidation (M))|F};[PA]HH{[DA]|[EG]}{I|L}{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{I|L}H{[WT]|[RM]};[W{I|L}]QQ{M(Oxidation (M))|F}W 8.9515;5.1837;4.3901;4.058;2.4579;2.3405;2.3391;2.1595;2.0084;1.1733 +;-;-;-;-;-;-;-;-;- + 272 + 1 2.089 74565.4 1.0 2474 3399 5872 DOHH2_400M_050219_1,5875 DOHH2_400M_050219_1,5875,DAPAHHLF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5876 32.042 108.0 518900.0 25 0 69747.0 39779 VEPRKNSF 8 76 488.76491238635367 975.5152718395074 2 488.7646362185478 MULTI CID FTMS 0 0 0 5872 241182.984375 0.9833421172817332 -1 0.0496387481689453 4 Unmodified _VEPRKNSF_ ENSG00000138892|ENST00000433387|TTLL8;nc|ENSG00000138892|A6PVC2-2|TTLL8;nc|ENSG00000138892|A6PVC2|TTLL8 10.183394434864962 0.7604730176254005 1 S{M(Oxidation (M))|F} 2 6 19.45 0.0 0.0 1.9939 0.0 0.0 723.4039264799355 0.0 723.4039264799355 0.0 6.351518780601921 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + S{M(Oxidation (M))|F} 1.9939 + + 35 + 1 2.089 48905.1 1.0 2475 3399 5872 DOHH2_400M_050219_1,5876 DOHH2_400M_050219_1,5876,VEPRKNSF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5877 32.049 342.0 238940.0 25 0 30491.0 -1 0 129 366.17327556028056 365.16599909368057 1 366.1757690310478 MULTI CID FTMS 0 0 0 5872 142081.5625 0.9822208607300036 2 -0.1585578918457031 5 1 PSY 3 -1 + 20.883 0.0 0.0 5.7188 5.7188 88.379 0.0 0.0 0.0 9.91399828238082 6.279004642699508 6.279004642699508 10.483046795745546 0 0.0 0.0 0.0 0.0 PSY;{M(Oxidation (M))|F}S{I|L} 5.7188;2.848 -;- 12 + 1 2.089 69469.1 1.0 2476 3399 5872 DOHH2_400M_050219_1,5877 DOHH2_400M_050219_1,5877, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5878 32.055 349.0 282350.0 25 0 20082.0 + 29651 QNKLTYTM 8 149 499.7517746586999 997.4889963841998 2 499.7530090212822 MULTI CID FTMS 0 0 0 5872 111395.234375 0.6346334398014691 -1 0.0496387481689453 6 Unmodified _QNKLTYTM_ ENSG00000060688|ENST00000263694|SNRNP40;ENST00000474025.1_1_1:31744094-31762265:-|nuORF;ENST00000489853.1_1_1:31732921-31754364:-|nuORF;nc|ENSG00000060688|Q96DI7-2|SNRNP40 12.531546534597751 0.7257836412119636 1 YTM 3 5 24.425 0.0 0.0 2.4486 0.0 0.0 584.3335226066592 0.0 584.3335226066592 0.0 0.3743682686917609 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 + YTM 2.4486 + + 378 + 1 2.089 78429.2 1.0 2477 3399 5872 DOHH2_400M_050219_1,5878 DOHH2_400M_050219_1,5878,QNKLTYTM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5879 32.069 800.0 178800.0 25 0 9045.4 + 2075 APNYRLKSL 9 169 531.3087472235221 1060.602941513844 2 531.3078491091728 MULTI CID FTMS 0 0 0 5872 90298.0625 0.8425157080315446 1 -0.0650215148925781 7 Unmodified _APNYRLKSL_ ENSG00000187325|ENST00000341864|TAF9B;ENSG00000273841|ENST00000217893|TAF9 41.95555342248728 0.0647214845423414 1 APNY 4 5 48.404 0.0 0.0 4.5638 0.0 0.0 0.0 612.3852633111936 612.3852633111936 12.486512420283232 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 + APNY 4.5638 + + 574 + 1 2.089 112888.7 0.5299999713897705 2478 3399 5872 DOHH2_400M_050219_1,5879 DOHH2_400M_050219_1,5879,APNYRLKSL True True APNYRLKSL 32.068687 531.307849109173 492902.625 5872.0 ENSG00000187325|ENST00000341864|TAF9B;;ENSG00000273841|ENST00000217893|TAF9 7.015509446461995 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5880 32.083 800.0 114710.0 25 0 3063.7 + 29417 QLEEWEERDS 10 113 660.7859403903266 1319.557327847453 2 660.7848998904228 MULTI CID FTMS 0 0 0 5872 90618.3046875 1.0 0 0.0 8 Unmodified _QLEEWEERDS_ REV__ENST00000480991.1_1_1:1597188-1601283:-|nuORF 13.042465956692816 0.6287021003332052 1 QD 2 -1 15.529 0.0 0.0 1.1768 0.0 0.0 0.0 1073.424817913074 1073.424817913074 2.0340219607612653 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 QD 1.1768 - 155 + 1 2.089 73787.7 0.5799999833106995 2479 3399 5872 DOHH2_400M_050219_1,5880 DOHH2_400M_050219_1,5880,QLEEWEERDS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5882 32.088 91.0 734370.0 25 0 65920.0 -1 FTNFLYDMLFY 11 67 745.3390761474485 1488.663599361697 2 745.3392822146416 MULTI CID FTMS 0 0 0 5881 587894.0625 0.4745776693371516 2 -0.2290687561035156 1 Oxidation (M) _FTNFLYDM(Oxidation (M))LFY_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 5.731851221503515 0.8481046878870278 1 {[MS]|[{M(Oxidation (M))|F}A]}[DV]SEAQQNA{M(Oxidation (M))|F}Y 13 -1 + 60.393 0.0 0.0 4.0569 4.0569 76.404 0.0 0.0 0.0 0.1099538430146296 43.40353206202845 0.1099538430146296 4.881166390211256 0 0.8935078169319297 0.0 0.0 0.8494850021680094 {[MS]|[{M(Oxidation (M))|F}A]}[DV]SEAQQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N[C(Carbamidomethyl (C))R]AQQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}[DV]SEA[AG]QNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}[DV]SEAQ[AG]NA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}[DV]SEAQQGGA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N[C(Carbamidomethyl (C))R]AQQGGA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}GG[C(Carbamidomethyl (C))R]AQQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N[C(Carbamidomethyl (C))R]A[AG]QNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N[C(Carbamidomethyl (C))R]AQ[AG]NA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}[DV]{[WT]|[RM]}QQNA{M(Oxidation (M))|F}Y 4.0569;3.729;3.4474;3.4474;3.4474;3.1178;3.1178;3.1178;3.1178;2.8739 -;-;-;-;-;-;-;-;-;- 401 1 2.091 55563.2 1.0 2480 3400 5881 DOHH2_400M_050219_1,5882 DOHH2_400M_050219_1,5882,FTNFLYDMLFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5883 32.102 800.0 61553.0 25 0 6260.4 -1 ISQYRFSTCVL 11 66 687.3496384694239 0 687.3496581912041 PEAK CID FTMS 0 0 0 5881 50483.64453125 0.1282296092524141 -5 0.2076034545898437 2 Carbamidomethyl (C) _ISQYRFSTC(Carbamidomethyl (C))VL_ ENST00000594154.5_1_19:52536841-52536970:-|nuORF 14.40537977576856 0.4095794898365014 1 VN[WR]QG 6 -1 31.828 0.0 0.0 2.3186 0.0 0.0 131.0942391713184 498.2237948053344 629.3180339766528 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.4247425010840047 VN[WR]QG 2.3186 - 46 + 1 2.091 42365.2 0.5799999833106995 2481 3400 5881 DOHH2_400M_050219_1,5883 DOHH2_400M_050219_1,5883,ISQYRFSTCVL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5884 32.106 177.0 600100.0 25 0 81113.0 + -1 LSLPAPGP 8 105 397.2264751105424 792.4383972878849 2 397.2265197634697 MULTI CID FTMS 0 0 0 5881 262303.625 0.2987230421269971 -1 0.0650215148925781 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSLPAPGP_ REV__ENST00000286494.8_1_12:58005338-58005476:+|nuORF 22.4526382665184 0.5719518724627818 1 {[QN]|[E{I|L}]|[KN]}{I|L}GKAY 7 -1 + 38.259 0.0 0.0 4.828 4.828 80.316 0.0 0.0 0.0 24.279324614556607 9.96539467890494 9.96539467890494 6.497519816658379 0 0.2887254899964357 1.5228787452803376 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}GKAY;{[QN]|[E{I|L}]|[KN]}{I|L}[KQ]Y 4.828;4.008 -;- 85 + 1 2.091 86436.9 1.0 2482 3400 5881 DOHH2_400M_050219_1,5884 DOHH2_400M_050219_1,5884,LSLPAPGP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5885 32.109 190.0 306760.0 25 0 20772.0 + 42183 VSDYLRQSY 9 90 565.7791342173809 1129.5437155015618 2 565.7784911990166 MULTI CID FTMS 0 0 0 5881 246425.125 0.3561606143722315 -1 0.0650215148925781 4 Unmodified _VSDYLRQSY_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 78.06048673739656 0.0179866705178931 1 VSDY[KT][PA]SY 10 4 + 88.99 0.0 0.0 7.8784 7.8784 89.462 0.0 0.0 0.0 45.6246936830415 13.521825181113629 13.521825181113629 6.773174902439578 0 1.774227503252014 2.0 0.805462187404089 0.3807196863200844 VSDY[KT][PA]SY;VSYD[KT][PA]SY;VSDY[KT]SV[MT];VSDY[KT][MT]SV;VSD{[HG]|PP}[R{I|L}]D[MT];VSD[RH]AVD[MT];VSD{[HG]|PP}VAVD[MT];VSDY[KT][DV]{[CT]|[{M(Oxidation (M))|F}G]};[VS]YWVVQSY;VSYD[KT][MT]SV 7.8784;7.2787;5.988;5.866;5.5063;5.5024;5.481;5.3957;5.3132;5.2664 -;-;-;-;-;-;-;-;-;- 868 + 1 2.091 53467.8 1.0 2483 3400 5881 DOHH2_400M_050219_1,5885 DOHH2_400M_050219_1,5885,VSDYLRQSY True True VSDYLRQSY 32.109301 565.778491199017 3902962.5 5881.0 nc|ENSG00000189079|Q68CP9-3|ARID2;;ENSG00000189079|ENST00000334344|ARID2 8.104690710703531 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5886 32.116 362.0 292170.0 25 0 27549.0 + 40646 VLDQGKITEY 10 140 583.3087495642138 0 583.3091308474541 PEAK CID FTMS 0 0 0 5881 211680.3125 0.7277960932762423 -1 0.0650215148925781 5 Unmodified _VLDQGKITEY_ ENSG00000135776|ENST00000344517|ABCB10 57.10758569107544 0.0281477372195156 1 {I|L}DQ[PA]DQNV 9 7 44.522 0.0 0.0 3.823 0.0 0.0 99.07095114568376 82.06696497134999 181.1379161170337 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.9916440611282624 0.75 {I|L}DQ[PA]DQNV 3.823 - 1611 + 1 2.091 82911.1 1.0 2484 3400 5881 DOHH2_400M_050219_1,5886 DOHH2_400M_050219_1,5886,VLDQGKITEY True True VLDQGKITEY 32.115837 583.309130847454 1726863.375 5881.0 ENSG00000135776|ENST00000344517|ABCB10 5.857748508453369 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5887 32.119 171.0 329360.0 25 0 30117.0 + 19238 LEIEAENHY 9 94 559.2617521647511 1116.508951396302 2 559.2621337771416 MULTI CID FTMS 0 0 0 5881 181901.1875 1.0 0 0.0 6 Unmodified _LEIEAENHY_ ENSG00000173141|ENST00000309594|MRPL57 56.17704186161178 0.0281986971544335 1 {[QN]|[E{I|L}]|[KN]}{I|L}EAENHY 9 0 + 73.65 0.0 0.0 6.5965 6.5965 91.649 0.0 0.0 0.0 62.41312192373542 10.597718523607966 10.597718523607966 12.21848749616356 0 0.5 1.6989700043360187 0.4247425010840047 1.1549471895720984 + + {[QN]|[E{I|L}]|[KN]}{I|L}EAENHY;{[QN]|[E{I|L}]|[KN]}{I|L}E[WQ]HY;{[QN]|[E{I|L}]|[KN]}{I|L}EAEGGHY;{[QN]|[E{I|L}]|[KN]}[WE][Q{I|L}]HY;{[QN]|[E{I|L}]|[KN]}[CS]EA[QP][Q{I|L}];{[QN]|[E{I|L}]|[KN]}{I|L}EAE[DC][VP];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP]AENHY;{[QN]|[E{I|L}]|[KN]}[WM]V{[ES]|[DT]|[{I|L}C]}[HS];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP][WQ]HY;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP]AEGGHY 6.5965;5.5021;4.7373;3.0579;2.6341;2.5896;1.8457;1.7554;0.7514;0.708 +;-;-;-;-;-;-;-;-;- + 179 + 1 2.091 48508.9 1.0 2485 3400 5881 DOHH2_400M_050219_1,5887 DOHH2_400M_050219_1,5887,LEIEAENHY True True LEIEAENHY 32.119191 559.262133777142 1190049.875 5881.0 ENSG00000173141|ENST00000309594|MRPL57 7.290559450785319 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5888 32.124 284.0 254690.0 25 0 22613.0 + -1 MIDPSGVSY 9 103 492.72064562928585 983.4267383253716 2 492.7206603884697 MULTI CID FTMS 0 0 0 5881 153050.65625 0.4316505415350815 -1 0.0650215148925781 7 Oxidation (M) _M(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 28.486842064014134 0.1687311288560894 1 [W{M(Oxidation (M))|F}][WP]VSY 7 -1 [W{M(Oxidation (M))|F}][WP]V + + 29.776 -3.5218 -0.49234 3.0278 3.0278 50.539 0.0 0.0 0.0 0.0 17.25644135543972 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 [W{M(Oxidation (M))|F}][WP]VSY 3.0278 - 316 + 1 2.091 58895.1 1.0 2486 3400 5881 DOHH2_400M_050219_1,5888 DOHH2_400M_050219_1,5888,MIDPSGVSY False False MIDPSGVSY 32.124401 492.72066038847 2078168.875 5881.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 4.800555229187012 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5889 32.13 328.0 222990.0 25 0 14902.0 + 37604 TLKPGTMSV 9 107 467.25711997717207 932.4996870211442 2 467.2571288943291 MULTI CID FTMS 0 0 0 5881 116815.2421875 1.0 0 0.0 8 Unmodified _TLKPGTMSV_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 20.453626601364224 0.2830276176381075 1 [{I|L}T]K 3 6 29.195 0.0 0.0 3.1308 0.0 0.0 0.0 587.2523287408811 587.2523287408811 16.174931603502944 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + [{I|L}T]K 3.1308 + + 126 + 1 2.091 61638.0 1.0 2487 3400 5881 DOHH2_400M_050219_1,5889 DOHH2_400M_050219_1,5889,TLKPGTMSV False True TLKPGTMSV 32.130349 467.257128894329 1128569.125 5881.0 nc|ENSG00000254087|P07948-2|LYN;;ENSG00000254087|ENST00000519728|LYN 3.7966559330622354 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5890 32.144 800.0 470060.0 25 0 55961.0 + 25881 NLIKKTVL 8 190 464.8133287257395 927.612104518279 2 464.8133727908134 MULTI CID FTMS 0 0 0 5881 115826.6875 0.0448351319220423 -2 0.1146602630615234 9 Unmodified _NLIKKTVL_ ENSG00000163811|ENST00000407426|WDR43;ENST00000466067.1_1_2:29147965-29158512:+|nuORF 126.56589448801844 9.61766789955883e-05 1 N{I|L}{I|L}KKTV{I|L} 8 0 + 87.323 0.0 0.0 9.4138 9.4138 83.1 0.0 0.0 0.0 38.08037176564042 14.904630595263413 14.904630595263413 0.1230450566754655 0 1.8441876774005248 2.0 0.8807196863200843 0.0 + + N{I|L}{I|L}KKTV{I|L};{I|L}N{I|L}KKTV{I|L};N{I|L}{I|L}KKVT{I|L};{I|L}N{I|L}KKVT{I|L};N{I|L}{I|L}KKT{I|L}V;{I|L}N{I|L}KKT{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KKTV{I|L};{I|L}GG{I|L}KKTV{I|L};{I|L}GG{I|L}KKVT{I|L};KKT{I|L}VQV{I|L} 9.4138;9.4005;8.5082;8.4949;7.5509;7.5376;6.8926;6.2459;5.3404;4.4937 +;-;-;-;-;-;+;-;-;- + 1469 + 1 2.091 285193.5 0.5099999904632568 2488 3400 5881 DOHH2_400M_050219_1,5890 DOHH2_400M_050219_1,5890,NLIKKTVL True True NLIKKTVL 32.144162 464.813372790813 27135894.0 5881.0 ENSG00000163811|ENST00000407426|WDR43;;ENST00000466067.1_1_2:29147965-29158512:+|nuORF 3.91593599319458 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5891 32.158 800.0 124580.0 25 0 6051.9 + -1 FNEKVTCNCY 10 149 667.7800909939281 1333.545629054656 2 667.7791015505791 MULTI CID FTMS 0 0 0 5881 109813.5703125 1.0 0 0.0 10 2 Carbamidomethyl (C) _FNEKVTC(Carbamidomethyl (C))NC(Carbamidomethyl (C))Y_ REV__ENST00000554030.1_1_14:45605726-45606507:+|nuORF 12.240655878213236 0.6421556946785427 1 C(Carbamidomethyl (C))Y 2 -1 20.846 0.0 0.0 1.5632 0.0 0.0 992.4346708043583 0.0 992.4346708043583 0.0 7.033773764119482 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 C(Carbamidomethyl (C))Y 1.5632 + + 134 1 2.091 78377.1 0.6200000047683716 2489 3400 5881 DOHH2_400M_050219_1,5891 DOHH2_400M_050219_1,5891,FNEKVTCNCY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5892 32.168 506.0 149960.0 25 0 14165.0 + 743 AEQHVTQLM 9 127 528.760512037632 1055.506471142064 2 528.7607910037041 MULTI CID FTMS 0 0 0 5881 247111.71875 0.8637094206511701 2 -0.2290687561035156 11 Unmodified _AEQHVTQLM_ ENSG00000149503|ENST00000394818|INCENP;ENST00000528037.1_1_11:61891511-61905356:+|nuORF;nc|ENSG00000149503|Q9NQS7-2|INCENP 31.26834338654808 0.1333407332142048 1 [PG]PWVEQ{I|L}M 9 5 + 58.232 0.0 0.0 5.517 5.517 78.817 0.0 0.0 0.0 12.79939975250756 36.9825221775622 12.79939975250756 2.6760624017703165 0 0.5 1.2218487496163564 0.8494850021680094 0.0 [PG]PWVEQ{I|L}M;[PG]PQ{[QG]|[NA]}TQ{I|L}M;[PG]P[DV]AEQ{I|L}M;[PG]P{[DA]|[EG]}VEQ{I|L}M;[PG]PWVE[AG]{I|L}M;[PG]P[AG]{[QG]|[NA]}TQ{I|L}M;[PG]PQ{[QG]|[NA]}T[AG]{I|L}M;[PG]A[DP]VEQ{I|L}M;{[CP]|[EA]}[HQ]VTQ{I|L}M;[PG]A[PG]{[QG]|[NA]}TQ{I|L}M 5.517;5.2635;4.6488;4.6446;4.6446;4.3952;4.3952;4.3594;4.2243;4.11 -;-;-;-;-;-;-;-;+;- + 1114 1 2.091 60635.8 1.0 2490 3400 5881 DOHH2_400M_050219_1,5892 DOHH2_400M_050219_1,5892,AEQHVTQLM False True AEQHVTQLM 32.168397 528.760791003704 1577148.5 5881.0 ENSG00000149503|ENST00000394818|INCENP;;ENST00000528037.1_1_11:61891511-61905356:+|nuORF;;nc|ENSG00000149503|Q9NQS7-2|INCENP 6.820883750915527 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5893 32.176 427.0 271500.0 25 0 84520.0 -1 0 84 643.36271353318 642.35543706658 1 643.3640014529228 MULTI CID FTMS 0 0 0 5881 104290.890625 0.7592771357899757 1 -0.093536376953125 12 1 {[QN]|[E{I|L}]|[KN]}A 3 -1 19.819 0.0 0.0 3.0854 0.0 0.0 0.0 326.19390937380786 326.19390937380786 3.136955994924264 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.8494850021680094 {[QN]|[E{I|L}]|[KN]}A 3.0854 - 61 1 2.091 89650.1 1.0 2491 3400 5881 DOHH2_400M_050219_1,5893 DOHH2_400M_050219_1,5893, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5895 32.181 9.0 4685100.0 25 0 332180.0 + 29411 QLEDGRTLSDY 11 60 648.8069009380474 1295.5992489428947 2 648.8081542849541 MULTI CID FTMS 0 0 0 5894 4690151.5 0.2946470578368466 2 -0.2384033203125 1 Unmodified _QLEDGRTLSDY_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF 43.9818466556824 0.1510575460884947 1 [AG]ANS{I|L}T[DV]N[TA]Y 13 11 + 65.495 0.0 0.0 5.0552 5.0552 88.462 0.0 0.0 0.0 12.017319765491436 6.567463216386244 6.567463216386244 23.12147906748844 0 0.6307196863200843 1.2218487496163564 0.3494850021680094 0.0 [AG]ANS{I|L}T[DV]N[TA]Y;[TP]DS{I|L}T[DV]N[TA]Y 5.0552;3.2706 -;- 167 + 1 2.091 38977.1 1.0 2492 3401 5894 DOHH2_400M_050219_1,5895 DOHH2_400M_050219_1,5895,QLEDGRTLSDY False True QLEDGRTLSDY 32.180799 648.808154284954 264301896.0 5894.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC 8.55408509572347 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5896 32.182 60.0 649380.0 25 0 34497.0 + 28449 PTDPKVVVY 9 74 509.2842510113492 1016.5539490894984 2 509.2846557497978 MULTI CID FTMS 0 0 0 5894 631126.625 0.0652359019234941 5 -0.4397621154785156 2 Unmodified _PTDPKVVVY_ ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;nc|ENSG00000112297|Q9Y4K1-2|CRYBG1 41.8396318013385 0.0653578398400075 1 [TP]D[KP]VVVY 9 0 + 43.355 0.0 0.0 4.2649 4.2649 84.459 0.0 0.0 0.0 16.61159286695316 19.410452128757143 16.61159286695316 15.061668675368622 0 1.1989700043360187 1.3979400086720375 0.805462187404089 0.0 + + [TP]D[KP]VVVY;[TP]{[VA]|[{I|L}G]}A[TP]VVY;[TP]{[VA]|[{I|L}G]}AVTPVY;VV[KP]DTPVY;[KP]VVDTPVY;[TP][Q{I|L}][TP]VVY;[TP][Q{I|L}]VTPVY;[KP]VD[TP]VVY;{[TV]|[{I|L}S]}[PA]A[TP]VVY;[KP]VDVTPVY 4.2649;2.7833;2.7293;2.2876;2.1647;2.1407;2.0868;1.9225;1.8722;1.8685 +;-;-;-;-;-;-;-;-;- + 274 1 2.091 41140.8 1.0 2493 3401 5894 DOHH2_400M_050219_1,5896 DOHH2_400M_050219_1,5896,PTDPKVVVY True True PTDPKVVVY 32.182274 509.284655749798 102728536.0 5894.0 ENSG00000112297|ENST00000633556|CRYBG1;;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;;nc|ENSG00000112297|Q9Y4K1-2|CRYBG1 6.766093571980794 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5897 32.183 35.0 1498000.0 25 0 79969.0 + 35360 STDPREALQY 10 74 590.2856427094841 1178.5567324857682 2 590.2860595583916 MULTI CID FTMS 0 0 0 5894 1584833.375 0.9415994004619224 1 -0.1355323791503906 3 Unmodified _STDPREALQY_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 36.506200033944 0.1944608063770638 1 A{I|L}[CS]{I|L}QY 7 7 34.737 0.0 0.0 2.9474 0.0 0.0 382.19551284004064 0.0 382.19551284004064 0.0 17.746907182741367 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 A{I|L}[CS]{I|L}QY 2.9474 - 209 1 2.091 45765.8 1.0 2494 3401 5894 DOHH2_400M_050219_1,5897 DOHH2_400M_050219_1,5897,STDPREALQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5898 32.185 37.0 1734700.0 25 0 140340.0 + 36844 TELPKAEKW 9 87 367.8698670552615 1100.5877717659846 3 367.8694946169853 MULTI CID FTMS 0 0 0 5894 1348805.375 0.3255225115670384 -1 0.093536376953125 4 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 40.23920728925047 0.0741434193262949 1 TE{I|L}PKAEKW 9 0 + 83.286 0.0 0.0 7.5674 7.5674 97.274 0.0 0.0 0.0 52.31700792907348 12.587418566968154 12.587418566968154 59.12199424038958 0 0.3494850021680094 2.0 0.5 0.0 + + TE{I|L}PKAEKW;[{I|L}T]NPK{[QN]|[E{I|L}]|[KN]}WT;[{I|L}T]NKP{[QN]|[E{I|L}]|[KN]}WT;[KP]AEK{[QN]|[E{I|L}]|[KN]}WT;[{I|L}P]{[QS]|[NT]}K{[QN]|[E{I|L}]|[KN]}WT;[{I|L}T]NPK{[QN]|[E{I|L}]|[KN]}{[DA]|[EG]}T;[{I|L}T]GGPK{[QN]|[E{I|L}]|[KN]}WT;[PS][Q{I|L}]K{[QN]|[E{I|L}]|[KN]}WT;[{I|L}T]NKP{[QN]|[E{I|L}]|[KN]}{[DA]|[EG]}T;[{I|L}T]GGKP{[QN]|[E{I|L}]|[KN]}WT 7.5674;2.1956;1.9221;1.8445;1.4514;1.3589;1.3589;1.1528;1.0854;1.0854 +;-;-;-;-;-;-;-;-;- + 268 + 1 2.091 60209.8 1.0 2495 3401 5894 DOHH2_400M_050219_1,5898 DOHH2_400M_050219_1,5898,TELPKAEKW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5899 32.186 67.0 1063000.0 25 0 143980.0 + 36846 TELPKAEKW 9 75 551.3007229014247 1100.586892869649 2 551.3007690310478 MULTI CID FTMS 0 0 0 5894 799218.25 0.3206308203149408 -1 0.093536376953125 5 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 42.312485326615175 0.0627620958981271 1 {[ET]|[MV]}{I|L}PKAEKW 9 0 + 60.104 0.0 0.0 5.4611 5.4611 83.569 0.0 0.0 0.0 7.147642715192504 7.373592158357326 7.147642715192504 7.373592158357326 0 1.8494850021680087 0.0 0.3807196863200844 0.0 + + {[ET]|[MV]}{I|L}PKAEKW;{[ET]|[MV]}{I|L}{I|L}P{[QS]|[NT]}KW;{[ET]|[MV]}{I|L}{I|L}P{I|L}{[ET]|[MV]}W;W[{M(Oxidation (M))|F}T]{I|L}P{I|L}{I|L}[DP];[KP]AEK{I|L}{[ET]|[MV]}W;[KP]AE{I|L}TEKW;[KP]AE{I|L}K{[ET]|[MV]}W;[KP]AEK{[QS]|[NT]}K{[DA]|[EG]};[KP]AEK{I|L}[{M(Oxidation (M))|F}T][PA];[PS][Q{I|L}]K{I|L}{[ET]|[MV]}W 5.4611;4.7911;4.6787;4.5871;2.7811;2.7091;2.3475;2.0568;1.8528;1.5525 +;-;-;-;-;-;-;-;-;- + 268 + 1 2.091 60424.6 1.0 2496 3401 5894 DOHH2_400M_050219_1,5899 DOHH2_400M_050219_1,5899,TELPKAEKW True True TELPKAEKW 32.186251 551.300769031048 71964720.0 5894.0 ENSG00000240682|ENST00000393295|ISY1;;nc|ENSG00000240682|Q9ULR0-2|ISY1;;nc|ENSG00000240682|Q9ULR0-1|ISY1 6.700249512990316 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5900 32.188 91.0 579360.0 25 0 49817.0 + 2549 ASEPSAQLSY 10 104 526.7480340795806 1051.4815152259612 2 526.7487060427666 MULTI CID FTMS 0 0 0 5894 614642.5 0.7461794295706419 3 -0.2950477600097656 6 Unmodified _ASEPSAQLSY_ ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;nc|ENSG00000131558|Q96A65-2|EXOC4 43.85829265575387 0.1168243637355526 1 {[SA]|[TG]}PQ{I|L}SY 7 3 34.99 0.0 0.0 3.3277 0.0 0.0 0.0 302.1005697516049 302.1005697516049 10.425872416043234 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.0114393726401687 0.3252574989159953 {[SA]|[TG]}PQ{I|L}SY 3.3277 - 565 1 2.091 43902.4 1.0 2497 3401 5894 DOHH2_400M_050219_1,5900 DOHH2_400M_050219_1,5900,ASEPSAQLSY True True ASEPSAQLSY 32.188257 526.748706042767 14894154.0 5894.0 ENSG00000131558|ENST00000253861|EXOC4;;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;;nc|ENSG00000131558|Q96A65-2|EXOC4;;ENST00000462055.5_1_7:132937857-133164897:+|nuORF 5.459298610687256 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5901 32.191 114.0 587170.0 25 0 47334.0 + 32972 SEMAGPPQM 9 102 474.2014107058764 946.3882684785528 2 474.2018005251884 MULTI CID FTMS 0 0 0 5894 434653.6875 0.5044030815442071 2 -0.2384033203125 7 Unmodified _SEMAGPPQM_ ENSG00000174231|ENST00000304992|PRPF8 81.61307344734483 0.0171259190214613 1 {[ES]|[DT]|[{I|L}C]}MAGPPQM 9 0 {[ES]|[DT]|[{I|L}C]}MA + + 36.357 9.5977 2.2953 3.8416 3.8416 52.722 0.0 0.0 0.0 0.0 16.857959558990952 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.7302046884880937 + + {[ES]|[DT]|[{I|L}C]}MAGPPQM 3.8416 + + 191 + 1 2.091 56432.1 1.0 2498 3401 5894 DOHH2_400M_050219_1,5901 DOHH2_400M_050219_1,5901,SEMAGPPQM True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5902 32.194 189.0 316310.0 25 0 21961.0 + 29491 QLKQQIQSI 9 115 543.3199602964849 1084.6253676597696 2 543.3198730349541 MULTI CID FTMS 0 0 0 5894 197121.671875 1.0 0 0.0 8 Unmodified _QLKQQIQSI_ ENSG00000100138|ENST00000401959|SNU13 68.08070601005525 0.0218408846571049 1 [Q{I|L}][KQ]Q{I|L}QS{I|L} 9 0 [Q{I|L}][KQ]Q{I|L} + + 28.478 25.366 3.435 2.6256 2.6256 49.683 0.0 0.0 0.0 0.0 14.255872241892042 0.0 0.0 0 0.4247425010840047 0.0 0.9247425010840048 0.0 + + [Q{I|L}][KQ]Q{I|L}QS{I|L} 2.6256 + + 299 + 1 2.091 52562.6 1.0 2499 3401 5894 DOHH2_400M_050219_1,5902 DOHH2_400M_050219_1,5902,QLKQQIQSI True True QLKQQIQSI 32.194276 543.319873034954 1135478.25 5894.0 ENSG00000100138|ENST00000401959|SNU13 3.924724022547404 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5903 32.198 178.0 502570.0 25 0 41879.0 -1 0 141 361.193801305318 360.186524838718 1 361.1928283572197 MULTI CID FTMS 0 0 0 5894 178284.578125 1.0 0 0.0 9 1 RW 2 -1 + 16.819 0.0 0.0 4.6696 4.6696 86.205 0.0 0.0 0.0 6.81936665037238 2.839966563652005 2.839966563652005 16.81936665037238 0 0.0 0.0 0.0 0.0 RW 4.6696 - 24 + 1 2.091 73698.0 1.0 2500 3401 5894 DOHH2_400M_050219_1,5903 DOHH2_400M_050219_1,5903, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5904 32.201 197.0 318470.0 25 0 32849.0 + -1 KGSGVVIIM 9 99 460.2689188020456 918.5232846708911 2 460.2673217654228 MULTI CID FTMS 0 0 0 5894 184821.328125 1.0 0 0.0 10 Oxidation (M) _ALPFVLLM(Oxidation (M))_ nc|ENSG00000133835|P51659-3|HSD17B4;nc|ENSG00000133835|P51659-2|HSD17B4;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;ENSG00000133835|ENST00000510025|HSD17B4 24.20995872069341 0.5349487244130675 1 {[CP]|[EA]}AKK{I|L}{I|L}{M(Oxidation (M))|F} 8 -1 + 45.355 0.0 0.0 4.9378 4.9378 78.743 0.0 0.0 0.0 3.055074169904444 28.364875295848435 3.055074169904444 4.030899869919438 0 0.5 0.0 0.0 0.0 {[CP]|[EA]}AKK{I|L}{I|L}{M(Oxidation (M))|F};[TA]QVK{I|L}{I|L}{M(Oxidation (M))|F};[TA]QKV{I|L}{I|L}{M(Oxidation (M))|F};[TA][AG]VK{I|L}{I|L}{M(Oxidation (M))|F};[{I|L}T]{[QG]|[NA]}K{I|L}{I|L}{M(Oxidation (M))|F};[TA][AG]KV{I|L}{I|L}{M(Oxidation (M))|F};[TA][RV]{[NV]|[RG]}{I|L}{M(Oxidation (M))|F} 4.9378;4.4989;4.3072;3.4906;3.3103;3.2988;1.0716 -;-;-;-;-;-;- 132 1 2.091 53847.5 1.0 2501 3401 5894 DOHH2_400M_050219_1,5904 DOHH2_400M_050219_1,5904,ALPFVLLM False False KGSGVVIIM 32.201488 460.267321765423 708175.8125 5894.0 nc|ENSG00000133835|P51659-3|HSD17B4;;nc|ENSG00000133835|P51659-2|HSD17B4;;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;;ENSG00000133835|ENST00000510025|HSD17B4 4.15333875020345 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5905 32.209 424.0 303490.0 25 0 18664.0 + 25874 NLHITIRS 8 137 477.2801646492101 0 477.2798339724541 PEAK CID FTMS 0 0 0 5894 160270.984375 1.0 0 0.0 11 Unmodified _NLHITIRS_ REV__ENST00000564079.5_1_15:43668383-43669260:+|nuORF 34.40172386719151 0.1907325408143214 1 {I|L}H{I|L}[Y{I|L}]N 6 -1 29.773 0.0 0.0 3.1256 0.0 0.0 114.03802859499338 82.0669191949828 196.10494778997617 0.0 0.0 0.0 0.0 0 1.25 0.0 0.0 0.6382104921644451 {I|L}H{I|L}[Y{I|L}]N 3.1256 - 174 + 1 2.091 101130.5 1.0 2502 3401 5894 DOHH2_400M_050219_1,5905 DOHH2_400M_050219_1,5905,NLHITIRS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5906 32.223 800.0 128290.0 25 0 7358.1 + + 790 ASEITSKGASLY 12 120 613.8171385776317 1225.6197242220633 2 613.8170654177666 MULTI CID FTMS 0 0 0 5894 162382.328125 1.0 0 0.0 12 Unmodified _AESLPLSFSIY_ ENSG00000103351|ENST00000576634|CLUAP1 53.832793166522166 0.0964040679835549 1 {[SA]|[TG]}G{I|L}KSTEAS{I|L}Y 12 -1 + 76.622 0.0 0.0 6.2517 6.2517 81.478 0.0 0.0 0.0 6.870983929090329 12.782274562053049 6.870983929090329 2.6676326390095824 0 1.3807196863200843 1.0457574905606752 2.379854553292708 0.0 {[SA]|[TG]}G{I|L}KSTEAS{I|L}Y;{[SA]|[TG]}E{I|L}{I|L}V[MT]S{I|L}Y;{[SA]|[TG]}EKKTEAS{I|L}Y;{[SA]|[TG]}E{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AS{I|L}Y;{[TV]|[{I|L}S]}QKSTEAS{I|L}Y;[{I|L}T]NKSTEAS{I|L}Y;{[ES]|[DT]|[{I|L}C]}A{I|L}{I|L}V[MT]S{I|L}Y;{[ES]|[DT]|[{I|L}C]}AKKTEAS{I|L}Y;{[ES]|[DT]|[{I|L}C]}A{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AS{I|L}Y;{[QS]|[NT]}{I|L}KSTEAS{I|L}Y 6.2517;6.0341;6.0189;5.9716;5.6911;5.4236;5.0455;5.0303;4.983;4.9693 -;-;-;-;-;-;-;-;-;- 5461 1 2.091 80438.8 0.7400000095367432 2503 3401 5894 DOHH2_400M_050219_1,5906 DOHH2_400M_050219_1,5906,AESLPLSFSIY False False ASEITSKGASLY 32.222871 613.817065417767 692027.75 5894.0 ENSG00000103351|ENST00000576634|CLUAP1 6.698888937632243 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 5907 32.231 462.0 169640.0 25 0 15352.0 + 16110 ITSSAVTTALK 11 119 546.3188592614249 1090.6231655896495 2 546.3188354372978 MULTI CID FTMS 0 0 0 5894 132658.390625 0.0094075411459043 8 -0.6720161437988281 13 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 24.95707706330732 0.5062028554934599 1 {I|L}TSSAVTT[{I|L}A]K 11 0 + 76.609 0.0 0.0 7.0243 7.0243 96.352 0.0 0.0 0.0 63.44776082118922 2.6314569049365986 2.6314569049365986 76.60876357194377 0 0.4247425010840047 2.0 0.0 0.1171302707394362 + + {I|L}TSSAVTT[{I|L}A]K 7.0243 + + 152 + 1 2.091 66772.9 1.0 2504 3401 5894 DOHH2_400M_050219_1,5907 DOHH2_400M_050219_1,5907,ITSSAVTTALK False True False False splicing PXD020620_cell_line DOHH2_400M_050219_1 5908 32.245 800.0 157790.0 25 0 14400.0 -1 LPDLCMTLDLQ 11 131 639.3109733534367 1276.6073937736733 2 639.3101684451103 MULTI CID FTMS 0 0 0 5894 130642.5390625 1.0 0 0.0 14 Oxidation (M) _LPDLCM(Oxidation (M))TLDLQ_ ENSG00000007202|ENST00000528896|BLTP2;nc|ENSG00000007202|Q14667-2|BLTP2 36.506200033944 0.2662161991516171 1 {NN|[MP]|[D{I|L}]|[EV]}M{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DAD{I|L}Q 11 -1 + 61.728 0.0 0.0 4.8353 4.8353 73.135 0.0 0.0 0.0 0.2764280577516373 0.2764280577516373 0.2764280577516373 0.2764280577516373 0 1.6549471895720984 0.744727494896694 1.5114393726401687 0.0 {NN|[MP]|[D{I|L}]|[EV]}M{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DAD{I|L}Q;{I|L}DACAS{I|L}[WD]RQ;{NN|[MP]|[D{I|L}]|[EV]}M{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EGD{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}M{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DW{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}M{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}WD{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}MNPKDG{M(Oxidation (M))|F}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}MNPK{M(Oxidation (M))|F}GD{I|L}Q;{I|L}DA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[WD]RQ;{NN|[MP]|[D{I|L}]|[EV]}M{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WD{I|L}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}M[EP]{I|L}DG{M(Oxidation (M))|F}{I|L}Q 4.8353;4.8137;4.813;4.7918;4.7695;4.7315;4.5357;4.4226;4.2988;4.2363 -;-;-;-;-;-;-;-;-;- 5051 1 2.091 101643.1 0.6700000166893005 2505 3401 5894 DOHH2_400M_050219_1,5908 DOHH2_400M_050219_1,5908,LPDLCMTLDLQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5909 32.254 489.0 371150.0 25 0 46108.0 + 14360 IEVNGKQSW 9 153 530.7751223134837 1059.5356916937674 2 530.7750732302666 MULTI CID FTMS 0 0 0 5894 112512.1484375 0.2292510996974785 -1 0.093536376953125 15 Unmodified _IEVNGKQSW_ chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;nc|ENSG00000111913|Q9Y4F9|RIPOR2 100.7086487251713 0.0106210784076588 1 {I|L}EVNGKQSW 9 0 + 109.63 0.0 0.0 10.347 10.347 94.321 0.0 0.0 0.0 46.66147990834767 13.46787486224656 13.46787486224656 9.208187539523747 0 1.8226825097560424 1.6989700043360187 1.9802046884880933 0.805462187404089 + + {I|L}EVNGKQSW;{I|L}EVNGK[AG]SW;{I|L}EVGGGKQSW;{I|L}EVGGGK[AG]SW;{I|L}EVNGKQC(Carbamidomethyl (C)){I|L};{I|L}EVNGK[HT]Y;{I|L}EV[W{I|L}]QSW;{I|L}EVNGK{[WT]|[RM]}N;{I|L}EVNGKQ[CG]{I|L};{I|L}EVNGK[AG]C(Carbamidomethyl (C)){I|L} 10.347;9.4775;9.4775;8.6125;8.1988;8.1309;8.1304;7.9046;7.3297;7.3297 +;-;-;-;-;-;-;-;-;- + 7181 + 1 2.091 145602.5 1.0 2506 3401 5894 DOHH2_400M_050219_1,5909 DOHH2_400M_050219_1,5909,IEVNGKQSW True True IEVNGKQSW 32.253551 530.775073230267 5737128.5 5894.0 nc|ENSG00000111913|Q9Y4F9|RIPOR2;;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;;chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;;ENSG00000111913|ENST00000643898|RIPOR2 7.5085984865824384 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5910 32.269 800.0 234020.0 25 0 17469.0 37669 TLMLFLSDI 9 227 351.529476696338 1051.566600689214 3 351.5291320681572 MULTI CID FTMS 0 0 0 5894 99940.078125 0.9998982306197332 1 -0.1355323791503906 16 Unmodified _TLMLFLSDI_ ENSG00000124215|ENST00000348616|CDH26;nc|ENSG00000124215|Q8IXH8-1|CDH26 7.289230182591677 0.6602208344931196 1 {I|L} 1 8 15.485 0.0 0.0 1.4725 0.0 0.0 920.4716585278844 0.0 920.4716585278844 0.0 5.806840011174872 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4725 + + 85 + 1 2.091 146991.1 0.8899999856948853 2507 3401 5894 DOHH2_400M_050219_1,5910 DOHH2_400M_050219_1,5910,TLMLFLSDI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5911 32.283 800.0 168340.0 25 0 15520.0 + 29565 QLQEERPEL 9 156 571.2958053307386 1140.5770577282772 2 571.2968627810478 MULTI CID FTMS 0 0 0 5894 103633.2578125 1.0 0 0.0 17 Unmodified _QLQEERPEL_ ENSG00000108312|ENST00000436088|UBTF;nc|ENSG00000108312|P17480-2|UBTF 47.594388314883695 0.0456443387682827 1 Q{I|L}QEER[EP]{I|L} 9 0 + 71.75 0.0 0.0 6.2907 6.2907 87.333 0.0 0.0 0.0 44.05092789190552 2.033348097384689 2.033348097384689 8.565473235138128 0 0.9802046884880936 1.6989700043360187 0.7742275032520141 0.3807196863200844 + + Q{I|L}QEER[EP]{I|L};Q{I|L}QEER{[QN]|[E{I|L}]|[KN]}P;Q{I|L}[AG]EER[EP]{I|L};Q{I|L}QEE[VG][EP]{I|L};Q{I|L}Q[NS]GR[EP]{I|L};Q{I|L}QEA[VP]{[HG]|PP}Y;Q{I|L}QEE[W{I|L}]VP;Q{I|L}QEA[DV][EP]{I|L};Q{I|L}QEE[VG]{[QN]|[E{I|L}]|[KN]}P;Q{I|L}[AG]EER{[QN]|[E{I|L}]|[KN]}P 6.2907;5.5397;5.4833;5.4833;5.4725;4.9777;4.8906;4.7424;4.7323;4.7323 +;-;-;-;-;-;-;-;-;- + 529 + 1 2.091 104094.0 0.5199999809265137 2508 3401 5894 DOHH2_400M_050219_1,5911 DOHH2_400M_050219_1,5911,QLQEERPEL True True QLQEERPEL 32.282673 571.296862781048 471718.65625 5894.0 nc|ENSG00000108312|P17480-2|UBTF;;ENSG00000108312|ENST00000436088|UBTF 6.17947260538737 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5912 32.297 800.0 87803.0 25 0 19791.0 -1 0 45 1197.4888469225998 3589.444711368 3 1198.491625964642 MULTI CID FTMS 0 0 0 5894 100712.125 0.6775517266354106 -1 0.093536376953125 18 1 W 1 -1 6.9897 0.0 0.0 0.19473 0.0 0.0 1311.4656299279634 2088.8457735650995 3400.311403493063 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.19473 - 3 + 1 2.091 62325.4 0.3799999952316284 2509 3401 5894 DOHH2_400M_050219_1,5912 DOHH2_400M_050219_1,5912, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5913 32.312 800.0 50591.0 25 0 3088.8 -1 0 79 658.0395195094353 2628.128972171341 4 658.2899047732353 MULTI CID FTMS 0 0 0 5894 77250.234375 1.0 0 0.0 19 1 [NS]{I|L}VH 5 -1 19.57 0.0 0.0 0.74462 0.0 0.0 0.0 2074.813761560266 2074.813761560266 16.470748756446607 0.0 0.0 0.0 0 0.0 0.0 0.7887254899964358 0.0 [NS]{I|L}VH 0.74462 - 192 1 2.091 39013.5 0.4799999892711639 2510 3401 5894 DOHH2_400M_050219_1,5913 DOHH2_400M_050219_1,5913, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 5915 32.316 51.0 1161700.0 25 0 108500.0 + 4128 DAPAHHLF 8 76 454.2247690021675 906.434985071135 2 454.2248107790947 MULTI CID FTMS 0 0 0 5914 991893.375 0.5324864394623456 1 -0.1028709411621093 1 Unmodified _DAPAHHLF_ ENSG00000135372|ENST00000257829|NAT10;ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000135372|Q9H0A0-2|NAT10;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8 52.69307289633392 0.1265801145616722 1 {[DA]|[EG]}PAHH{I|L}{M(Oxidation (M))|F} 8 0 + 66.164 0.0 0.0 7.2993 7.2993 96.36 0.0 0.0 0.0 33.010752252503366 12.914930551903224 12.914930551903224 42.41811817498018 0 1.1549471895720984 2.0 0.0 0.0 + + {[DA]|[EG]}PAHH{I|L}{M(Oxidation (M))|F};WPA{[QS]|[NT]}[YR];[PA]HH{[DA]|[EG]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[H{I|L}]S{[QS]|[NT]}A[HQ] 7.2993;2.6197;2.0201;0.78962 +;-;-;- + 138 + 1 2.091 50822.0 1.0 2511 3402 5914 DOHH2_400M_050219_1,5915 DOHH2_400M_050219_1,5915,DAPAHHLF True True DAPAHHLF 32.316333 454.224810779095 21548192.0 5914.0 nc|ENSG00000135372|Q9H0A0-2|NAT10;;ENSG00000135372|ENST00000257829|NAT10;;ENSG00000204962|ENST00000531613|PCDHA8;;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8 8.012461185455322 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5916 32.322 338.0 204410.0 25 0 8331.6 + 33167 SEYDRGVNTF 10 113 594.2699937223484 1186.5254345114968 2 594.2701904177666 MULTI CID FTMS 0 0 0 5914 138972.703125 0.0883854611860733 2 -0.159515380859375 2 Unmodified _SEYDRGVNTF_ ENSG00000143106|ENST00000271308|PSMA5;ENST00000484563.1_1_1:109955653-109968973:-|nuORF 55.23464941255904 0.0494277333541689 1 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[WT]|[RM]}GVNT{M(Oxidation (M))|F} 10 2 + 29.216 0.0 0.0 2.4623 2.4623 68.918 0.0 0.0 0.0 1.9788290869480465 7.329022044314467 1.9788290869480465 1.9788290869480465 0 1.1549471895720984 0.0 0.1803115997617927 0.0 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[WT]|[RM]}GVNT{M(Oxidation (M))|F};{[QS]|[NT]}{M(Oxidation (M))|F}C(Carbamidomethyl (C))A{[NV]|[RG]}NT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[WT]|[RM]}RNT{M(Oxidation (M))|F};{[QS]|[NT]}{M(Oxidation (M))|F}C(Carbamidomethyl (C))A[{I|L}V]DT{M(Oxidation (M))|F};{[QS]|[NT]}{M(Oxidation (M))|F}[{I|L}T]QTDT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[WT]|[RM]}KNE{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[WT]|[RM]}GVGGT{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]NC(Carbamidomethyl (C))A{[NV]|[RG]}NT{M(Oxidation (M))|F};{[QS]|[NT]}{M(Oxidation (M))|F}[CG]A{[NV]|[RG]}NT{M(Oxidation (M))|F};{[QS]|[NT]}{M(Oxidation (M))|F}C(Carbamidomethyl (C))A{[NV]|[RG]}GGT{M(Oxidation (M))|F} 2.4623;2.2956;2.1655;2.0419;1.8549;1.8446;1.69;1.5922;1.5232;1.5232 -;-;-;-;-;-;-;-;-;- 1046 1 2.091 55882.4 1.0 2512 3402 5914 DOHH2_400M_050219_1,5916 DOHH2_400M_050219_1,5916,SEYDRGVNTF True True SEYDRGVNTF 32.322467 594.270190417767 18734124.0 5914.0 ENST00000484563.1_1_1:109955653-109968973:-|nuORF;;ENSG00000143106|ENST00000271308|PSMA5 7.297999540964763 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5917 32.324 61.0 937740.0 25 0 68365.0 + 5303 DLDHSIGTQY 10 83 574.7641875520728 1147.5138221709456 2 574.7650634646416 MULTI CID FTMS 0 0 0 5914 841471.5 0.4924463040148388 -1 0.1355323791503906 3 Unmodified _DLDHSIGTQY_ ENSG00000092203|ENST00000448790|TOX4;nc|ENSG00000092203|O94842-2|TOX4 85.64151623876279 0.0124443716933876 1 {NN|[MP]|[D{I|L}]|[EV]}[HD]S{I|L}GTQY 10 0 + 82.362 0.0 0.0 7.1774 7.1774 82.746 0.0 0.0 0.0 1.7685992422806578 14.146518864155126 1.7685992422806578 1.7685992422806578 0 1.1989700043360187 1.6989700043360187 2.274227503252014 0.3807196863200844 + + {NN|[MP]|[D{I|L}]|[EV]}[HD]S{I|L}GTQY;[AG]T[HN]S{I|L}GTQY;{NN|[MP]|[D{I|L}]|[EV]}[HS]D{I|L}GTQY;[HD]{NN|[MP]|[D{I|L}]|[EV]}S{I|L}GTQY;[AG]Y[{M(Oxidation (M))|F}E]{I|L}GTQY;{NN|[MP]|[D{I|L}]|[EV]}[HD]S{I|L}GT[AG]Y;[AG]T[HN]S{I|L}GT[AG]Y;[YE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}GTQY;{[SA]|[TG]}A[HN]S{I|L}GTQY;{NN|[MP]|[D{I|L}]|[EV]}[HS]D{I|L}GT[AG]Y 7.1774;7.0233;6.9151;6.4876;6.3995;6.3788;6.2278;6.2191;6.1986;6.1164 +;-;-;-;-;-;-;-;-;- + 764 1 2.091 49346.6 1.0 2513 3402 5914 DOHH2_400M_050219_1,5917 DOHH2_400M_050219_1,5917,DLDHSIGTQY True True DLDHSIGTQY 32.323975 574.765063464642 17842924.0 5914.0 ENSG00000092203|ENST00000448790|TOX4;;nc|ENSG00000092203|O94842-2|TOX4 8.072426795959473 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5918 32.325 55.0 706050.0 25 0 87221.0 + 29987 QTATTTMVY 9 69 508.2418491221693 1014.4691453111384 2 508.2422973513603 MULTI CID FTMS 0 0 0 5914 706365.375 1.0 0 0.0 4 Unmodified _QTATTTMVY_ ENSG00000198218|ENST00000395443|QRICH1 36.12702656103203 0.0967173616627612 1 MRMVY 5 6 23.06 0.0 0.0 2.2731 0.0 0.0 316.165264551176 0.0 316.165264551176 0.0 6.822581265925436 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.3494850021680094 MRMVY 2.2731 - 60 + 1 2.091 32942.8 1.0 2514 3402 5914 DOHH2_400M_050219_1,5918 DOHH2_400M_050219_1,5918,QTATTTMVY True True QTATTTMVY 32.325373 508.24229735136 4140045.75 5914.0 ENSG00000198218|ENST00000395443|QRICH1 5.255936463673909 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5919 32.327 70.0 880750.0 25 0 37186.0 + 6817 EEAQFETKKLY 11 78 462.56986667764505 1384.6877706331352 3 462.5700256228447 MULTI CID FTMS 0 0 0 5914 690244.5 1.0 0 0.0 5 Unmodified _EEAQFETKKLY_ ENSG00000183291|ENST00000331835|SELENOF;ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF 26.120906184454547 0.478875788770541 1 EE[QA]{M(Oxidation (M))|F}ETKK{I|L}Y 11 0 + 60.807 0.0 0.0 4.3914 4.3914 87.572 0.0 0.0 0.0 44.07532089591438 15.070623213458028 15.070623213458028 60.807164907324456 0 0.25 1.154901959985743 0.3807196863200844 0.0 + + EE[QA]{M(Oxidation (M))|F}ETKK{I|L}Y 4.3914 + + 140 + 1 2.091 57828.9 1.0 2515 3402 5914 DOHH2_400M_050219_1,5919 DOHH2_400M_050219_1,5919,EEAQFETKKLY False True EEAQFETKKLY 32.327016 462.570025622845 4013946.0 5914.0 ENST00000331835.9_2_1:87346375-87379803:-|nuORF;;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;;nc|ENSG00000183291|O60613-2|SELENOF;;ENSG00000183291|ENST00000331835|SELENOF 7.717151959737142 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5920 32.331 188.0 518070.0 25 0 102110.0 + 45893 YYSPHGHIL 9 106 362.8502859589101 1085.5290284769303 3 362.8504516482353 MULTI CID FTMS 0 0 0 5914 346045.96875 1.0 0 0.0 6 Unmodified _YYSPHGHIL_ ENSG00000144895|ENST00000460851|EIF2A;nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A 34.18733598223924 0.1073653526364521 1 YYSPHGH{I|L}{I|L} 9 0 + 51.392 0.0 0.0 4.7343 4.7343 86.761 0.0 0.0 0.0 33.900472848224226 10.211484792255838 10.211484792255838 19.20818753952375 0 0.0 2.0 0.0 0.0 + + YYSPHGH{I|L}{I|L};YYS[YQ]H{I|L}{I|L} 4.7343;2.9648 +;- + 160 + 1 2.091 83024.5 1.0 2516 3402 5914 DOHH2_400M_050219_1,5920 DOHH2_400M_050219_1,5920,YYSPHGHIL True True YYSPHGHIL 32.330623 362.850451648235 3175412.125 5914.0 nc|ENSG00000144895|Q9BY44-2|EIF2A;;nc|ENSG00000144895|Q9BY44-4|EIF2A;;nc|ENSG00000144895|Q9BY44-3|EIF2A;;ENSG00000144895|ENST00000460851|EIF2A 8.014761765797934 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5921 32.334 146.0 353660.0 25 0 35292.0 + 8845 EYVSSQLGRP 10 99 568.2923040581367 0 568.2924072146416 PEAK CID FTMS 0 0 0 5914 219908.9375 1.0 0 0.0 7 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 17.11289562659939 0.3208555510962471 1 {M(Oxidation (M))|F}STNG{I|L}W 7 -1 35.438 0.0 0.0 3.1234 0.0 0.0 244.14345554899245 82.06675897769765 326.2102145266901 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}STNG{I|L}W 3.1234 - 223 + 1 2.091 44359.9 1.0 2517 3402 5914 DOHH2_400M_050219_1,5921 DOHH2_400M_050219_1,5921,EYVSSQLGRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5922 32.347 800.0 195060.0 25 0 17530.0 + 13761 HSDPESDFY 9 153 548.7146615036318 1095.4147700740634 2 548.7147094607353 MULTI CID FTMS 0 0 0 5914 197671.171875 0.2641576342015758 1 -0.1028709411621093 8 Unmodified _HSDPESDFY_ ENSG00000119760|ENST00000337768|SUPT7L;nc|ENSG00000119760|O94864-2|SUPT7L 64.23631603340823 0.0237365939569086 1 [HS]DPESD{M(Oxidation (M))|F}Y 9 0 + 66.609 0.0 0.0 6.0807 6.0807 83.298 0.0 0.0 0.0 4.137342758552691 46.91630954681237 4.137342758552691 4.689771668819212 0 0.9247425010840048 0.0 1.6549471895720984 0.0 + + [HS]DPESD{M(Oxidation (M))|F}Y;{[DS]|[MA]|[CV]|TT}HPESD{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YC(Carbamidomethyl (C))]SD{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[DS]|[MA]|[CV]|TT}ESD{M(Oxidation (M))|F}Y;{[MG]|[TS]}[{M(Oxidation (M))|F}T]ESD{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}[DP]HSD{M(Oxidation (M))|F}Y;[HS]{[CT]|[{M(Oxidation (M))|F}G]}HSD{M(Oxidation (M))|F}Y;{[SA]|[TG]}{[YD]|[{M(Oxidation (M))|F}M]}ESD{M(Oxidation (M))|F}Y;{[MG]|[TS]}[HC]HSD{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}[WY]SD{M(Oxidation (M))|F}Y 6.0807;5.6526;4.4879;4.3649;4.1447;4.0925;4.0901;3.9194;3.8699;3.7759 +;-;-;-;-;-;-;-;-;- + 497 1 2.091 117306.8 0.7799999713897705 2518 3402 5914 DOHH2_400M_050219_1,5922 DOHH2_400M_050219_1,5922,HSDPESDFY True True HSDPESDFY 32.347389 548.714709460735 9897297.0 5914.0 ENSG00000119760|ENST00000337768|SUPT7L;;nc|ENSG00000119760|O94864-2|SUPT7L 9.018204053243002 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5923 32.354 337.0 249300.0 25 0 26295.0 + 558 AEIGYRNSL 9 98 511.7672280033832 0 511.7671386599541 PEAK CID FTMS 0 0 0 5914 173925.390625 1.0 0 0.0 9 Unmodified _AEIGYRNSL_ ENSG00000112742|ENST00000369798|TTK;nc|ENSG00000112742|P33981-2|TTK 47.74868867922204 0.0378261468855112 1 {I|L}{I|L}[HD]{M(Oxidation (M))|F} 5 8 21.382 0.0 0.0 2.0932 0.0 0.0 200.07927644550085 193.0986727350219 393.1779491805228 0.0 0.0 0.0 0.0 0 0.5 0.0 0.805462187404089 0.0 {I|L}{I|L}[HD]{M(Oxidation (M))|F} 2.0932 - 33 + 1 2.091 67905.2 1.0 2519 3402 5914 DOHH2_400M_050219_1,5923 DOHH2_400M_050219_1,5923,AEIGYRNSL True True AEIGYRNSL 32.3535 511.767138659954 936471.5625 5914.0 ENSG00000112742|ENST00000369798|TTK;;nc|ENSG00000112742|P33981-2|TTK 4.652454614639282 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5924 32.357 176.0 295130.0 25 0 31709.0 + 45894 YYSPHGHIL 9 98 543.7721060899006 1085.529659246601 2 543.7723266482353 MULTI CID FTMS 0 0 0 5914 164023.625 1.0 0 0.0 10 Unmodified _YYSPHGHIL_ ENSG00000144895|ENST00000460851|EIF2A;nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A 49.66892048692302 0.0410958345688192 1 YYSPHGH{I|L}{I|L} 9 0 + 66.538 0.0 0.0 6.1295 6.1295 91.9 0.0 0.0 0.0 32.8997654084889 10.959924024478129 10.959924024478129 19.20818753952375 0 0.9247425010840048 2.0 0.0 0.0 + + YYSPHGH{I|L}{I|L};YYS[YQ]H{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QT]SCGH{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QT]SC(Carbamidomethyl (C))H{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QT]{I|L}S[C(Carbamidomethyl (C))H]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[CP]|[EA]}SYY{I|L}{I|L};YY[RN][MN]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QT]S{I|L}[C(Carbamidomethyl (C))H]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[CP]|[EA]}P[C(Carbamidomethyl (C))R]{I|L}{I|L};{[HG]|PP}HPSYY{I|L}{I|L} 6.1295;4.36;3.9128;3.311;2.4146;2.2847;2.2661;1.8399;1.6567;1.4994 +;-;-;-;-;-;-;-;-;- + 224 + 1 2.091 44799.6 1.0 2520 3402 5914 DOHH2_400M_050219_1,5924 DOHH2_400M_050219_1,5924,YYSPHGHIL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5925 32.364 393.0 294190.0 25 0 25848.0 + 18075 KTEVALGYI 9 132 497.2841228043346 992.5536926754692 2 497.2845336794853 MULTI CID FTMS 0 0 0 5914 155455.765625 0.3075091158569208 -2 0.2290687561035156 11 Unmodified _KTEVALGYI_ REV__ENSG00000104447|ENST00000395715|TRPS1;REV__nc|ENSG00000104447|Q9UHF7-3|TRPS1;REV__nc|ENSG00000104447|Q9UHF7|TRPS1 32.30548876998284 0.1201446275138228 1 A{I|L}TQP{I|L} 6 -1 27.674 0.0 0.0 2.7882 0.0 0.0 351.1805370131629 0.0 351.1805370131629 0.0 14.909759138768209 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 A{I|L}TQP{I|L} 2.7882 - 1146 + 1 2.091 92411.9 1.0 2521 3402 5914 DOHH2_400M_050219_1,5925 DOHH2_400M_050219_1,5925,KTEVALGYI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5926 32.368 211.0 791940.0 25 0 111380.0 + 44029 YIIKDKHIL 9 111 381.5692996783865 1141.6860696353597 3 381.5693237185478 MULTI CID FTMS 0 0 0 5914 156393.515625 0.1570398129752998 -2 0.2290687561035156 12 Unmodified _YIIKDKHIL_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 38.61474834105838 0.0830609365873449 1 Y{I|L}{I|L}KD[HK]{I|L}{I|L} 9 0 + 64.637 0.0 0.0 5.6615 5.6615 92.102 0.0 0.0 0.0 41.38305361079156 3.47804375441612 3.47804375441612 64.63669386598376 0 0.3054621874040891 2.0 0.7302046884880937 0.0 + + Y{I|L}{I|L}KD[HK]{I|L}{I|L} 5.6615 + + 284 + 1 2.091 134567.7 1.0 2522 3402 5914 DOHH2_400M_050219_1,5926 DOHH2_400M_050219_1,5926,YIIKDKHIL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5927 32.375 328.0 215860.0 25 0 18839.0 + 25823 NLAQRNVAL 9 112 499.7908047818582 997.5670566305164 2 499.7911254763603 MULTI CID FTMS 0 0 0 5914 116886.1640625 1.0 0 0.0 13 Unmodified _NLAQRNVAL_ ENSG00000074356|ENST00000389005|NCBP3 37.97399986684836 0.0865783450051559 1 {[QV]|[N{I|L}]|[RA]|[KV]}AQ 4 5 41.555 0.0 0.0 4.1656 0.0 0.0 0.0 568.3189180963499 568.3189180963499 24.731975075880328 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}AQ 4.1656 + + 349 + 1 2.091 61329.2 1.0 2523 3402 5914 DOHH2_400M_050219_1,5927 DOHH2_400M_050219_1,5927,NLAQRNVAL True True NLAQRNVAL 32.375091 499.79112547636 700309.875 5914.0 ENSG00000074356|ENST00000389005|NCBP3 4.616512457529704 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5928 32.389 800.0 142070.0 25 0 19444.0 + 8392 ESEDPNYYQY 10 124 654.2565176786791 1306.498482424158 2 654.2573730349541 MULTI CID FTMS 0 0 0 5914 118959.703125 0.946893975815056 -1 0.1355323791503906 14 Unmodified _ESEDPNYYQY_ ENSG00000174428|ENST00000472837|GTF2IRD2B;ENSG00000196275|ENST00000451013|GTF2IRD2;nc|ENSG00000196275|Q86UP8-3|GTF2IRD2 75.76082778847304 0.0187510588500744 1 [NP]DE{[ES]|[DT]|[{I|L}C]}YYQY 10 5 + 45.576 0.0 0.0 3.4884 3.4884 74.839 0.0 0.0 0.0 6.846507897442521 10.452490459521968 6.846507897442521 5.032059605518313 0 0.9073871488943877 0.8860566476931632 0.6549471895720985 0.6989700043360187 [NP]DE{[ES]|[DT]|[{I|L}C]}YYQY;[NP]Y[C(Carbamidomethyl (C))H]YYQY;[NP]YY[C(Carbamidomethyl (C))H]YQY;[DP]DD[QT]YYQY;[NP]DQ{[C(Carbamidomethyl (C))G]|[NC]}YYQY;YYE{[ES]|[DT]|[{I|L}C]}YYQY;[DP]NE{[ES]|[DT]|[{I|L}C]}YYQY;[DP]DQ{[ES]|[DT]|[{I|L}C]}YYQY;[YE]Y{[ES]|[DT]|[{I|L}C]}YYQY;{[ES]|[DT]|[{I|L}C]}DE[NP]YYQY 3.4884;3.1033;3.0076;2.9644;2.9218;2.8897;2.7667;2.7154;2.571;2.4402 -;-;-;-;-;-;-;-;-;- 595 1 2.091 87909.2 0.550000011920929 2524 3402 5914 DOHH2_400M_050219_1,5928 DOHH2_400M_050219_1,5928,ESEDPNYYQY True True ESEDPNYYQY 32.388929 654.257373034954 959756.0 5914.0 ENSG00000174428|ENST00000472837|GTF2IRD2B;;ENSG00000196275|ENST00000451013|GTF2IRD2;;nc|ENSG00000196275|Q86UP8-3|GTF2IRD2 9.141371091206867 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5929 32.397 440.0 179650.0 25 0 15508.0 36303 SYKAPYTCGGD 11 139 581.2469031425592 1160.4792533519185 2 581.2471801638603 MULTI CID FTMS 0 0 0 5914 111817.84375 0.7494117618722838 -2 0.2290687561035156 15 Unmodified _SYKAPYTCGGD_ ENSG00000185950|ENST00000375856|IRS2 13.614867670302877 0.751941774060705 1 ATY[Y{I|L}]AY 7 9 28.192 0.0 0.0 2.4293 0.0 0.0 297.0622327398817 0.0 297.0622327398817 0.0 17.500452295863553 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 ATY[Y{I|L}]AY 2.4293 - 1438 + 1 2.091 61696.1 1.0 2525 3402 5914 DOHH2_400M_050219_1,5929 DOHH2_400M_050219_1,5929,SYKAPYTCGGD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5930 32.411 800.0 110070.0 25 0 7970.8 + 39685 VEEPSRPSASW 11 126 622.8000065701816 1243.5854602071631 2 622.7989990115166 MULTI CID FTMS 0 0 0 5914 99872.71875 1.0 0 0.0 16 Unmodified _VEEPSRPSASW_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000545049.1_1_12:2977686-2983239:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 48.07275321834293 0.1283031204265279 1 VEEP 4 7 62.295 0.0 0.0 5.0093 0.0 0.0 0.0 786.3606051080686 786.3606051080686 29.155292653348056 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3807196863200844 0.0 + VEEP 5.0093 + + 739 + 1 2.091 69092.0 0.5099999904632568 2526 3402 5914 DOHH2_400M_050219_1,5930 DOHH2_400M_050219_1,5930,VEEPSRPSASW False True VEEPSRPSASW 32.410597 622.798999011517 1100549.875 5914.0 ENSG00000111206|ENST00000359843|FOXM1;;nc|ENSG00000111206|Q08050-2|FOXM1;;nc|ENSG00000111206|Q08050-3|FOXM1;;ENST00000545049.1_1_12:2977686-2983239:-|nuORF 7.538575331370036 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5931 32.414 128.0 603870.0 25 0 49644.0 + + 25439 QDGMPGRSW 9 105 517.2855770778012 0 517.2860595583916 PEAK CID FTMS 0 0 0 5914 268874.8125 0.9767890953750524 -2 0.2290687561035156 17 Unmodified _NEGQKTKTK_ nc|ENSG00000129484|Q9UGN5|PARP2 15.847184025352805 0.2451986057151378 1 T 1 -1 8.4862 0.0 0.0 0.82186 0.0 0.0 516.2961023863237 412.1939180963501 928.4900204826738 0.0 0.0 0.0 0.0 0 0.25 0.0 0.2887254899964357 0.0 T 0.82186 + + 20 + 1 2.091 64981.8 1.0 2527 3402 5914 DOHH2_400M_050219_1,5931 DOHH2_400M_050219_1,5931,NEGQKTKTK False False QDGMPGRSW 32.41441 517.286059558392 1866114.0 5914.0 nc|ENSG00000129484|Q9UGN5|PARP2 4.455094814300537 2.0 False 9.0 True nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 5933 32.42 57.0 775670.0 25 0 98149.0 + 25882 NLIKKTVL 8 73 464.8133287257395 927.612104518279 2 464.8134033083916 MULTI CID FTMS 0 0 0 5932 729546.75 0.2823988623480861 1 -0.0566444396972656 1 Unmodified _NLIKKTVL_ ENSG00000163811|ENST00000407426|WDR43;ENST00000466067.1_1_2:29147965-29158512:+|nuORF 43.85829265575387 0.1697421968005898 1 N{I|L}{I|L}K[KT]V{I|L} 8 0 + 68.709 0.0 0.0 7.4071 7.4071 97.093 0.0 0.0 0.0 50.51152522447381 14.904630595263413 14.904630595263413 68.70882944702394 0 0.9247425010840048 2.0 0.8807196863200843 0.0 + + N{I|L}{I|L}K[KT]V{I|L} 7.4071 + + 80 + 1 2.101 38712.8 1.0 2528 3403 5932 DOHH2_400M_050219_1,5933 DOHH2_400M_050219_1,5933,NLIKKTVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5934 32.424 206.0 288390.0 25 0 30132.0 7851 ELLGPPAP 8 100 397.2264751105424 792.4383972878849 2 397.2261535525322 MULTI CID FTMS 0 0 0 5932 131454.25 0.1497059503486572 2 -0.1242637634277343 2 Unmodified _ELLGPPAP_ ENSG00000130675|ENST00000252971|MNX1;nc|ENSG00000130675|P50219-2|MNX1 22.4526382665184 0.5719518724627818 1 {[QN]|[E{I|L}]|[KN]}{I|L}GKAY 7 3 + 34.375 0.0 0.0 4.3379 4.3379 74.848 0.0 0.0 0.0 20.88054449011843 6.699332110028216 6.699332110028216 2.975694635544748 0 0.3494850021680094 1.5228787452803376 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}GKAY;{[QN]|[E{I|L}]|[KN]}{I|L}[KQ]Y 4.3379;3.9624 -;- 81 + 1 2.101 53797.1 1.0 2529 3403 5932 DOHH2_400M_050219_1,5934 DOHH2_400M_050219_1,5934,ELLGPPAP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5935 32.425 33.0 1790800.0 25 0 120830.0 + 7387 EGGIVSKNF 9 87 475.7509227224404 949.4872925116808 2 475.7509643435478 MULTI CID FTMS 0 0 0 5932 1549488.125 0.4277164081842554 -2 0.2384033203125 3 Unmodified _EGGIVSKNF_ ENSG00000152137|ENST00000281938|HSPB8 49.93300154707207 0.0405168250806675 1 {[DA]|[EG]}G{I|L}VSKN{M(Oxidation (M))|F} 9 0 {[DA]|[EG]}G{I|L} + + 31.631 22.853 6.4162 3.3314 3.3314 51.248 0.0 0.0 0.0 0.0 8.778288285855869 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.6989700043360187 + + {[DA]|[EG]}G{I|L}VSKN{M(Oxidation (M))|F} 3.3314 + + 143 + 1 2.101 51821.3 1.0 2530 3403 5932 DOHH2_400M_050219_1,5935 DOHH2_400M_050219_1,5935,EGGIVSKNF True True EGGIVSKNF 32.42481 475.750964343548 36773464.0 5932.0 ENSG00000152137|ENST00000281938|HSPB8 3.614165782928467 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5936 32.427 99.0 588000.0 25 0 72868.0 + 6342 DVMIRKEEL 9 74 566.805186980209 1131.595821027218 2 566.8052245974541 MULTI CID FTMS 0 0 0 5932 466218.46875 1.0 0 0.0 4 Unmodified _DVMIRKEEL_ nc|ENSG00000162385|P61326-2|MAGOH 55.23464941255904 0.0288927259679799 1 DVM{I|L} 4 5 58.175 0.0 0.0 5.141 0.0 0.0 0.0 670.3523043268186 670.3523043268186 24.463950151760656 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + DVM{I|L} 5.141 + + 121 + 1 2.101 49543.2 1.0 2531 3403 5932 DOHH2_400M_050219_1,5936 DOHH2_400M_050219_1,5936,DVMIRKEEL True True DVMIRKEEL 32.426962 566.805224597454 2338437.75 5932.0 nc|ENSG00000162385|P61326-2|MAGOH 6.114383061726888 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 5937 32.43 138.0 464710.0 25 0 34514.0 + 2520 ASDKETYELRY 11 102 458.8894486123448 1373.6465164372344 3 458.8893615603447 MULTI CID FTMS 0 0 0 5932 355384.78125 0.3975429432092047 -2 0.2384033203125 5 Unmodified _ASDKETYELRY_ ENSG00000163584|ENST00000295830|RPL22L1 49.74193281347159 0.1190592179673825 1 ASDKETYE{I|L}RY 11 0 + 93.162 0.0 0.0 6.7821 6.7821 93.23 0.0 0.0 0.0 76.04812647717057 11.575773191777929 11.575773191777929 16.008337601396846 0 0.6677353201839438 1.3010299956639813 0.8494850021680094 0.4247425010840047 + + ASDKETYE{I|L}RY;ASDKETYEY[R{I|L}];ASDKETYYE[R{I|L}];ASDKETY[VP]{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]};{[WS]|[C(Carbamidomethyl (C)){I|L}]}KETYE[{I|L}T]{[MS]|[{M(Oxidation (M))|F}A]};{[WS]|[C(Carbamidomethyl (C)){I|L}]}KE[{I|L}V]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}RY;{[WS]|[C(Carbamidomethyl (C)){I|L}]}KE[{I|L}V][{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]} 6.7821;5.6167;5.4329;4.0255;2.9837;2.6332;1.297 +;-;-;-;-;-;- + 686 + 1 2.101 58553.3 1.0 2532 3403 5932 DOHH2_400M_050219_1,5937 DOHH2_400M_050219_1,5937,ASDKETYELRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5938 32.433 138.0 455920.0 25 0 33621.0 17376 KMEKSNTNW 9 83 569.2703438812907 1136.5261348293814 2 569.2712890505791 MULTI CID FTMS 0 0 0 5932 343716.09375 0.7919263211228088 -1 0.1028709411621093 6 Unmodified _KMEKSNTNW_ ENSG00000135040|ENST00000361671|NAA35;nc|ENSG00000135040|Q5VZE5-2|NAA35 29.84058131909904 0.1515068451768857 1 [PS][WY]SKPSW 9 7 + 77.172 0.0 0.0 6.7902 6.7902 91.781 0.0 0.0 0.0 16.937035997783696 64.69788305610538 16.937035997783696 10.52378753635658 0 1.6307196863200843 1.154901959985743 0.9204841662593096 0.4247425010840047 [PS][WY]SKPSW;[PS][WY]SKSPW;{[DS]|[MA]|[CV]|TT}W[MT]KPSW;[VG][MT][MT]KPSW;[YQ]P[MT]KPSW;[YQ]P[MT]KSPW;{[CT]|[{M(Oxidation (M))|F}G]}SPK[MT]WSP;[YQ]PK[MT]PSW;{[CT]|[{M(Oxidation (M))|F}G]}SPK[MT]PSW;{[CT]|[{M(Oxidation (M))|F}G]}PSK[MT]PSW 6.7902;5.8642;4.9393;4.8603;4.4793;4.4332;4.2691;4.1644;4.1006;4.0545 -;-;-;-;-;-;-;-;-;- 168 1 2.101 52108.9 1.0 2533 3403 5932 DOHH2_400M_050219_1,5938 DOHH2_400M_050219_1,5938,KMEKSNTNW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5939 32.436 174.0 417610.0 25 0 54244.0 + 32755 SEDHSGSYW 9 100 534.2069922868627 1066.399431640525 2 534.2072631716728 MULTI CID FTMS 0 0 0 5932 314865.8125 0.81011756695846 1 -0.0566444396972656 7 Unmodified _SEDHSGSYW_ chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161681590-161683167:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-11|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-14|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-4|FCRLA;nc|ENSG00000132185|Q7L513-5|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 50.855029805455786 0.0384952370514206 1 [HD]{[MG]|[TS]}DGSYW 9 4 + 48.075 0.0 0.0 4.5081 4.5081 54.888 0.0 0.0 0.0 1.9281195628315828 26.87661977963252 1.9281195628315828 0.0 0 0.9247425010840048 0.7958800173440752 1.424742501084005 0.0 [HD]{[MG]|[TS]}DGSYW;[HD]{[ES]|[DT]|[{I|L}C]}SGSYW;{[CT]|[{M(Oxidation (M))|F}G]}YMNSY{[DA]|[EG]};{[MG]|[TS]}[HD]DGSYW;[HS]{[ES]|[DT]|[{I|L}C]}DGSYW;{[MG]|[TS]}[Y{M(Oxidation (M))|F}]NSYW;{[CT]|[{M(Oxidation (M))|F}G]}YMN[MT]{[CT]|[{M(Oxidation (M))|F}G]};{[CT]|[{M(Oxidation (M))|F}G]}YMGGSY{[DA]|[EG]};[HD]{[ES]|[DT]|[{I|L}C]}{[QC]|[C(Carbamidomethyl (C))A]}YW;{[CT]|[{M(Oxidation (M))|F}G]}{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}GSY{[DA]|[EG]} 4.5081;4.5081;3.8522;3.5423;3.4251;3.3822;3.1046;2.9887;2.756;2.7279 -;-;-;-;-;-;-;-;-;- 248 1 2.101 59447.0 1.0 2534 3403 5932 DOHH2_400M_050219_1,5939 DOHH2_400M_050219_1,5939,SEDHSGSYW True True SEDHSGSYW 32.435949 534.207263171673 2336966.75 5932.0 ENST00000470841.1_1_1:161681590-161683167:+|nuORF;;nc|ENSG00000132185|Q7L513-11|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-3|FCRLA;;chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;nc|ENSG00000132185|Q7L513-4|FCRLA;;nc|ENSG00000132185|Q7L513-14|FCRLA;;nc|ENSG00000132185|Q7L513-5|FCRLA 6.712954521179199 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5940 32.44 240.0 420050.0 25 0 33001.0 + 44031 YIIKDKHIL 9 117 571.8505974415731 1141.686641949946 2 571.8506347537041 MULTI CID FTMS 0 0 0 5932 226148.203125 0.9373828148831688 -1 0.1028709411621093 8 Unmodified _YIIKDKHIL_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 69.33821966488729 0.021354776001734 1 {I|L}Y{I|L}KDKH{I|L}{I|L} 9 2 + 86.882 0.0 0.0 7.61 7.61 95.338 0.0 0.0 0.0 49.84835815000107 6.127042801912879 6.127042801912879 18.723637474483468 0 1.7786596949921218 2.0 1.305462187404089 0.0 {I|L}Y{I|L}KDKH{I|L}{I|L};{I|L}Y{I|L}KA[TA]H{I|L}{I|L};[Y{I|L}]{I|L}KDKH{I|L}{I|L};[H{I|L}]KDK{I|L}{I|L}Y{I|L};{I|L}Y{I|L}K[RP]K[QP];[K{I|L}]HDK{I|L}{I|L}Y{I|L};[KS][RH]{I|L}{I|L}{I|L}Y{I|L};[KS][R{I|L}]H{I|L}{I|L}Y{I|L};[KS][VG]H{I|L}{I|L}{I|L}Y{I|L};[KS][VG]{I|L}H{I|L}{I|L}Y{I|L} 7.61;5.97;3.8511;3.826;3.0935;2.8144;2.0105;1.9385;1.8424;1.7704 -;-;+;-;-;-;-;-;-;- + 397 + 1 2.101 78497.9 1.0 2535 3403 5932 DOHH2_400M_050219_1,5940 DOHH2_400M_050219_1,5940,YIIKDKHIL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5941 32.454 800.0 164920.0 25 0 12182.0 + 41978 VQMHKMKQCLQ 11 131 731.8509914536808 1461.6874299741614 2 731.8518554568291 MULTI CID FTMS 0 0 0 5932 151560.296875 0.8990076294418342 -1 0.1028709411621093 9 Carbamidomethyl (C),2 Oxidation (M) _VQM(Oxidation (M))HKM(Oxidation (M))KQC(Carbamidomethyl (C))LQ_ REV__ENSG00000106546|ENST00000242057|AHR 56.17704186161178 0.0846604386095034 1 {[QV]|[N{I|L}]|[RA]|[KV]}NEEMMN{I|L}N{I|L}Q 12 -1 + 103.0 0.0 0.0 7.0469 7.0469 80.217 0.0 0.0 0.0 24.08030623340529 9.098233696509112 9.098233696509112 0.2422750325201406 0 3.636500636031869 2.0 0.2614393726401688 1.6733937431123282 {[QV]|[N{I|L}]|[RA]|[KV]}NEEMMN{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEMMHG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEMM{I|L}NN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NT{[SA]|[TG]}MNENN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEMMN{I|L}{I|L}NQ;{[QV]|[N{I|L}]|[RA]|[KV]}NT[C(Carbamidomethyl (C))K]MN{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEMM{I|L}N{I|L}NQ;{[QV]|[N{I|L}]|[RA]|[KV]}NT[C(Carbamidomethyl (C))K]MHG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEMMN{I|L}QVQ 7.0469;7.0303;6.841;6.1749;6.1559;5.9574;5.9499;5.9408;5.8972;5.8916 -;-;-;-;-;-;-;-;-;- 4473 1 2.101 97057.1 0.699999988079071 2536 3403 5932 DOHH2_400M_050219_1,5941 DOHH2_400M_050219_1,5941,VQMHKMKQCLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5942 32.458 185.0 435930.0 25 0 34100.0 + 7244 EESGARINI 9 123 494.75665243153816 987.4987519298764 2 494.7567932009697 MULTI CID FTMS 0 0 0 5932 122048.4921875 0.0986237690563192 -3 0.331939697265625 10 Unmodified _EESGARINI_ ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000498121.1_1_21:47289198-47321357:+|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 37.97399986684836 0.0865783450051559 1 EESGA[R{I|L}]N{I|L} 9 0 + 39.419 0.0 0.0 3.9918 3.9918 72.171 0.0 0.0 0.0 23.97350583296253 6.755018336798969 6.755018336798969 1.706962271689754 0 0.2742275032520141 1.3979400086720375 0.0 0.2396518287104437 + + EESGA[R{I|L}]N{I|L};EESQ[R{I|L}]N{I|L};EESGA[R{I|L}]GG{I|L};EESQ[R{I|L}]GG{I|L};EESG[VG]{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L};EES{[NV]|[RG]}{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L};EE[HV][YK]A{I|L};EE{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L};[KS]{[NV]|[RG]}[{I|L}T]S[HC];[KS]{[NV]|[RG]}{[MG]|[TS]}{I|L}[HC] 3.9918;3.8189;2.8166;2.6383;1.7354;1.5571;1.1552;0.90105;0.51252;0.29542 +;-;-;-;-;-;-;-;-;- + 335 + 1 2.101 65508.5 1.0 2537 3403 5932 DOHH2_400M_050219_1,5942 DOHH2_400M_050219_1,5942,EESGARINI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5943 32.462 236.0 431410.0 25 0 29118.0 + 2522 ASDKETYELRY 11 106 687.8279179674879 1373.6412830017755 2 687.8268310427666 MULTI CID FTMS 0 0 0 5932 117994.8515625 0.3043544699378407 -2 0.2384033203125 11 Unmodified _ASDKETYELRY_ ENSG00000163584|ENST00000295830|RPL22L1 86.2760493876774 0.0029891665059585 1 ASDKETYE{I|L}RY 11 0 + 111.76 0.0 0.0 8.1357 8.1357 88.935 0.0 0.0 0.0 83.27825632997948 12.060323256818208 12.060323256818208 5.897554856604174 0 1.6382104921644451 1.0457574905606752 0.7742275032520141 0.2742275032520141 + + ASDKETYE{I|L}RY;ASDKEYTE{I|L}RY;ASATAETYE{I|L}RY;ASDKYETE{I|L}RY;ASATAEYTE{I|L}RY;ASDKET[PS]VES[QP];ASATAYETE{I|L}RY;ASWWTYE{I|L}RY;ASA[WD]TYE{I|L}RY;ASDKC(Carbamidomethyl (C))K[PG]EAS[QP] 8.1357;7.7064;7.162;6.9041;6.7326;6.1337;5.9303;5.8927;5.8626;5.7623 +;-;-;-;-;-;-;-;-;- + 4733 + 1 2.101 78543.3 1.0 2538 3403 5932 DOHH2_400M_050219_1,5943 DOHH2_400M_050219_1,5943,ASDKETYELRY True True ASDKETYELRY 32.462288 687.826831042767 15964365.0 5932.0 ENSG00000163584|ENST00000295830|RPL22L1 9.906951586405436 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5944 32.471 496.0 143810.0 25 0 6659.2 + 24366 MESDIKVNGY 10 116 578.2697792204984 1154.5250055077968 2 578.2695190310478 MULTI CID FTMS 0 0 0 5932 111856.6328125 1.0 0 0.0 12 Unmodified _MESDIKVNGY_ ENSG00000137642|ENST00000260197|SORL1 18.1463463914782 0.5430639438673815 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AM[K{I|L}]VNGY 10 2 + 17.267 0.0 0.0 1.4956 1.4956 74.279 0.0 0.0 0.0 1.6940260964304024 7.352386692766743 1.6940260964304024 8.08159703347442 0 0.5796896906561032 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AM[K{I|L}]VNGY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[C(Carbamidomethyl (C))R]{I|L}{I|L}NGY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[C(Carbamidomethyl (C))R][YR]{I|L}Q 1.4956;0.79562;0.19605 -;-;- 175 + 1 2.101 56235.6 1.0 2539 3403 5932 DOHH2_400M_050219_1,5944 DOHH2_400M_050219_1,5944,MESDIKVNGY False True MESDIKVNGY 32.471047 578.269519031048 398409.9375 5932.0 ENSG00000137642|ENST00000260197|SORL1 4.411663770675659 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5946 32.476 54.0 1147500.0 25 0 69028.0 + 36845 TELPKAEKW 9 98 367.8698670552615 1100.5877717659846 3 367.8695251345634 MULTI CID FTMS 0 0 0 5945 893478.625 0.2156333385322282 2 -0.14471435546875 1 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 20.41453444215458 0.284085796332423 1 {[ET]|[MV]}{I|L}PK{[CP]|[EA]}KW 9 0 {[ET]|[MV]} + + 23.989 3.7236 1.6183 2.1797 2.1797 49.049 0.0 0.0 0.0 0.0 9.296379078462351 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 + + {[ET]|[MV]}{I|L}PK{[CP]|[EA]}KW 2.1797 + + 152 + 1 2.101 55022.5 1.0 2540 3404 5945 DOHH2_400M_050219_1,5946 DOHH2_400M_050219_1,5946,TELPKAEKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5947 32.478 92.0 538010.0 25 0 81274.0 + 36847 TELPKAEKW 9 71 551.3007229014247 1100.586892869649 2 551.3007690310478 MULTI CID FTMS 0 0 0 5945 477619.5625 0.1916116806927746 2 -0.14471435546875 2 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 49.52724829834842 0.0414064571532091 1 {[ET]|[MV]}{I|L}PKAEKW 9 0 + 50.684 0.0 0.0 4.6052 4.6052 84.525 0.0 0.0 0.0 7.147642715192504 9.208187539523747 7.147642715192504 10.828956512079335 0 2.004432191740108 0.0 0.0 0.3807196863200844 + + {[ET]|[MV]}{I|L}PKAEKW;W[{M(Oxidation (M))|F}T]{I|L}{I|L}P{I|L}[DP];{[ET]|[MV]}{I|L}P{I|L}{[QS]|[NT]}KW;{[ET]|[MV]}{I|L}P{I|L}{I|L}{[ET]|[MV]}W;[KP]{[CP]|[EA]}{I|L}TEKW;[KP]{[CP]|[EA]}K{[QS]|[NT]}KW;[KP]{[CP]|[EA]}K{I|L}{[ET]|[MV]}W;[KP]{[CP]|[EA]}{I|L}K{[ET]|[MV]}W;[KP]{[CP]|[EA]}K{I|L}[{M(Oxidation (M))|F}T][PA];[KP]{[CP]|[EA]}{I|L}K[{M(Oxidation (M))|F}T][PA] 4.6052;3.6213;3.6137;3.4329;2.4291;2.0675;1.8867;1.2516;1.2384;0.60336 +;-;-;-;-;-;-;-;-;- + 151 + 1 2.101 45236.7 1.0 2541 3404 5945 DOHH2_400M_050219_1,5947 DOHH2_400M_050219_1,5947,TELPKAEKW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5948 32.481 133.0 286830.0 25 0 25526.0 + 2550 ASEPSAQLSY 10 79 526.7480340795806 1051.4815152259612 2 526.7487670779228 MULTI CID FTMS 0 0 0 5945 317627.53125 0.3856015978134545 6 -0.4541778564453125 3 Unmodified _ASEPSAQLSY_ ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;nc|ENSG00000131558|Q96A65-2|EXOC4 13.042465956692816 0.6287021003332052 1 {[SA]|[TG]}PQ{I|L}S 6 4 24.811 0.0 0.0 2.3596 0.0 0.0 0.0 465.1600179937925 465.1600179937925 3.8418903791359327 0.0 0.0 0.0 0 0.0 0.6020599913279624 0.566901560044258 0.4247425010840047 {[SA]|[TG]}PQ{I|L}S 2.3596 - 140 1 2.101 35273.6 1.0 2542 3404 5945 DOHH2_400M_050219_1,5948 DOHH2_400M_050219_1,5948,ASEPSAQLSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5949 32.483 132.0 304060.0 25 0 15926.0 + 29412 QLEDGRTLSDY 11 67 648.8069009380474 1295.5992489428947 2 648.8071777224541 MULTI CID FTMS 0 0 0 5945 263029.28125 0.0165241578753379 5 -0.3769683837890625 4 Unmodified _QLEDGRTLSDY_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF 23.78978130925829 0.5336113198261219 1 [Q{I|L}]ED[YV]N 7 7 36.527 0.0 0.0 2.8193 0.0 0.0 0.0 431.19367395572505 431.19367395572505 15.073478691387834 0.0 0.0 0.0 0 0.2302046884880938 1.5228787452803376 0.0 0.0 [Q{I|L}]ED[YV]N 2.8193 - 74 + 1 2.101 38939.5 1.0 2543 3404 5945 DOHH2_400M_050219_1,5949 DOHH2_400M_050219_1,5949,QLEDGRTLSDY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5950 32.488 238.0 463310.0 25 0 69397.0 + 34026 SLKEKIYRL 9 108 383.90441724856487 0 383.9041931033134 PEAK CID FTMS 0 0 0 5945 219061.640625 0.7819560534512006 -1 0.0566444396972656 5 Unmodified _SLKEKIYRL_ ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:676972-730286:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1 27.088373467376528 0.1368127342934387 1 K{I|L}{I|L}HD 5 7 12.396 0.0 0.0 1.6187 0.0 0.0 74.3560438475143 82.06685053043202 156.4228943779463 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}{I|L}HD 1.6187 - 60 + 1 2.101 91643.1 1.0 2544 3404 5945 DOHH2_400M_050219_1,5950 DOHH2_400M_050219_1,5950,SLKEKIYRL False True SLKEKIYRL 32.487745 383.904193103313 1766916.625 5945.0 ENST00000354485.5_1_9:676972-730286:+|nuORF;;ENSG00000107104|ENST00000382297|KANK1;;ENST00000489369.5_1_9:676972-732786:+|nuORF;;nc|ENSG00000107104|Q14678-2|KANK1 2.913893222808838 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5951 32.494 375.0 256970.0 25 0 16554.0 + 4842 DFLKNSKIL 9 134 359.88207299261023 1076.6243895780308 3 359.8814880251884 MULTI CID FTMS 0 0 0 5945 139157.609375 1.0 0 0.0 6 Unmodified _DFLKNSKIL_ ENSG00000000005|ENST00000373031|TNMD;nc|ENSG00000000005|Q9H2S6-2|TNMD;nc|ENSG00000000005|Q9H2S6-3|TNMD 26.268140514670165 0.1969607489560049 1 D{I|L}[RH]E 5 7 27.619 0.0 0.0 2.5654 0.0 0.0 0.0 423.2726229303344 423.2726229303344 9.392653074926043 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.3807196863200844 0.0 D{I|L}[RH]E 2.5654 - 97 + 1 2.101 81534.0 1.0 2545 3404 5945 DOHH2_400M_050219_1,5951 DOHH2_400M_050219_1,5951,DFLKNSKIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5952 32.499 244.0 242960.0 25 0 21641.0 + 29110 QERDFQYGY 9 100 603.2643461159661 1204.514139298732 2 603.2646362185478 MULTI CID FTMS 0 0 0 5945 114694.7578125 0.8602417665482054 1 -0.0676193237304687 7 Unmodified _QERDFQYGY_ ENSG00000121964|ENST00000682281|GTDC1;ENST00000482601.1_1_2:144885858-144903287:-|nuORF;ENST00000491448.5_1_2:144764747-144969145:-|nuORF;nc|ENSG00000121964|Q4AE62-2|GTDC1;nc|ENSG00000121964|Q4AE62-3|GTDC1;nc|ENSG00000121964|Q4AE62-4|GTDC1;nc|ENSG00000121964|Q4AE62-5|GTDC1 56.17704186161178 0.0281986971544335 1 EQYGY 5 4 63.984 0.0 0.0 5.3121 0.0 0.0 546.2565785138687 0.0 546.2565785138687 0.0 43.22682509756042 0.0 0.0 0 1.6861818737241734 0.0 0.3807196863200844 1.1861818737241734 EQYGY 5.3121 - 173 1 2.101 49045.1 1.0 2546 3404 5945 DOHH2_400M_050219_1,5952 DOHH2_400M_050219_1,5952,QERDFQYGY True True QERDFQYGY 32.49904 603.264636218548 830483.8125 5945.0 ENSG00000121964|ENST00000682281|GTDC1;;nc|ENSG00000121964|Q4AE62-3|GTDC1;;nc|ENSG00000121964|Q4AE62-4|GTDC1;;ENST00000482601.1_1_2:144885858-144903287:-|nuORF;;nc|ENSG00000121964|Q4AE62-2|GTDC1;;ENST00000491448.5_1_2:144764747-144969145:-|nuORF;;nc|ENSG00000121964|Q4AE62-5|GTDC1 6.086894194285075 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5953 32.513 800.0 232080.0 25 0 23921.0 + 44001 YIDQGRNPQLY 11 131 683.8415456704109 1365.6685384076218 2 683.8416625857353 MULTI CID FTMS 0 0 0 5945 117267.5546875 0.0996753002693911 -3 0.2950477600097656 8 Unmodified _YIDQGRNPQLY_ ENSG00000133398|ENST00000255764|MED10;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 79.42699986076722 0.0080827643292781 1 Y{I|L}DK[HM]{[VA]|[{I|L}G]}N{I|L}Y 11 6 + 91.412 0.0 0.0 6.6935 6.6935 80.152 0.0 0.0 0.0 21.5268489747895 7.473255568916983 7.473255568916983 0.7962230431844404 0 2.6237125054200234 2.0 0.9247425010840048 1.1549471895720984 Y{I|L}DK[HM]{[VA]|[{I|L}G]}N{I|L}Y;Y{I|L}DKNY{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y;[Y{I|L}]DKKTC(Carbamidomethyl (C))Y{I|L}Y;Y{I|L}DKN{[ET]|[MV]}[HA]{I|L}Y;Y{I|L}EPDTKK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N;Y{I|L}DKGGY{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y;[Y{I|L}]DKKT[CG]Y{I|L}Y;[Y{I|L}]DK[Y{M(Oxidation (M))|F}]KN{I|L}Y;Y{I|L}DKN{[ET]|[MV]}{I|L}[HA]Y;[Y{I|L}]T[R{M(Oxidation (M))|F}]D{I|L}Y{I|L}Y 6.6935;6.6352;6.6142;6.3854;6.0263;5.9642;5.9431;5.909;5.7527;5.7288 -;-;-;-;-;-;-;-;-;- 8140 + 1 2.101 134370.3 0.6499999761581421 2547 3404 5945 DOHH2_400M_050219_1,5953 DOHH2_400M_050219_1,5953,YIDQGRNPQLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5954 32.519 328.0 269130.0 25 0 18740.0 317 AEAAVSQTGF 10 128 490.73818605256736 979.4618191719348 2 490.7371398806572 MULTI CID FTMS 0 0 0 5945 120204.328125 1.0 0 0.0 9 Unmodified _AEAAVSQTGF_ ENSG00000164252|ENST00000312916|AGGF1 25.399314129420983 0.3980215340001851 1 W 1 10 15.485 0.0 0.0 1.5809 0.0 0.0 775.3717750818942 0.0 775.3717750818942 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.5809 - 207 + 1 2.101 69637.9 1.0 2548 3404 5945 DOHH2_400M_050219_1,5954 DOHH2_400M_050219_1,5954,AEAAVSQTGF False True EDHSGSYW 32.518818 490.737139880657 518284.46875 5945.0 ENST00000470841.1_1_1:161681590-161683167:+|nuORF;;nc|ENSG00000132185|Q7L513-11|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-3|FCRLA;;chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;nc|ENSG00000132185|Q7L513-4|FCRLA;;nc|ENSG00000132185|Q7L513-14|FCRLA;;nc|ENSG00000132185|Q7L513-5|FCRLA 4.006505171457927 2.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5955 32.525 332.0 195950.0 25 0 10465.0 + 36954 TEYTPDPNHGF 11 106 639.2735527193055 1276.5325525054109 2 639.2729980349541 MULTI CID FTMS 0 0 0 5945 110242.359375 1.0 0 0.0 10 Unmodified _TEYTPDPNHGF_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 40.23920728925047 0.2087110615831976 1 {[ET]|[MV]}YT[DP]{M(Oxidation (M))|F}[YN]Q 10 4 + 44.671 0.0 0.0 3.4994 3.4994 71.356 0.0 0.0 0.0 2.161903266879719 2.161903266879719 2.161903266879719 2.161903266879719 0 1.274227503252014 0.0 0.3054621874040891 0.6989700043360187 {[ET]|[MV]}YT[DP]{M(Oxidation (M))|F}[YN]Q;[YT]EE{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TY[DP];[YT]ET[C(Carbamidomethyl (C))K]TY[DP];{[ET]|[MV]}YT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[C(Carbamidomethyl (C))C]{I|L}Q;EE[YT]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TY[DP];{[ET]|[MV]}YE{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TY[DP];[YT]EEV[YV]Y[DP];[DP][NP]{M(Oxidation (M))|F}[DP]TY[DP];EE[HV][C(Carbamidomethyl (C))K]TY[DP];[YT]ET[SG][SG]TY[DP] 3.4994;3.33;2.9584;2.8518;2.7738;2.5881;2.5846;2.5119;2.4022;2.3846 -;-;-;-;-;-;-;-;-;- 857 + 1 2.101 54250.6 1.0 2549 3404 5945 DOHH2_400M_050219_1,5955 DOHH2_400M_050219_1,5955,TEYTPDPNHGF False True TEYTPDPNHGF 32.524867 639.272998034954 701657.0 5945.0 nc|ENSG00000124155|Q969N2-2|PIGT;;nc|ENSG00000124155|Q969N2-6|PIGT;;nc|ENSG00000124155|Q969N2-3|PIGT;;nc|ENSG00000124155|Q969N2-4|PIGT;;ENSG00000124155|ENST00000279036|PIGT;;nc|ENSG00000124155|Q969N2-5|PIGT 6.113320032755534 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5956 32.539 800.0 165420.0 25 0 10603.0 + 19824 LHCKFLFVRI 10 123 425.91924739486814 1274.7359127848044 3 425.9192993044853 MULTI CID FTMS 0 0 0 5945 84062.3359375 0.8082097900385545 1 -0.0676193237304687 11 Unmodified _LHCKFLFVRI_ ENST00000373344.9_1_X:76940479-76944390:-|nuORF 15.738622578938676 0.5834632108994704 1 [H{I|L}]{[VA]|[{I|L}G]}{I|L}{I|L}H 7 7 39.754 0.0 0.0 3.1186 0.0 0.0 0.0 488.2372264395378 488.2372264395378 26.259103962389005 0.0 0.0 0.0 0 1.1549471895720984 1.5228787452803376 0.0 0.0 [H{I|L}]{[VA]|[{I|L}G]}{I|L}{I|L}H 3.1186 - 169 1 2.101 111761.4 0.4000000059604645 2550 3404 5945 DOHH2_400M_050219_1,5956 DOHH2_400M_050219_1,5956,LHCKFLFVRI False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5958 32.556 800.0 139670.0 25 0 10579.0 + 14361 IEVNGKQSW 9 158 530.7751223134837 1059.5356916937674 2 530.7747070193291 MULTI CID FTMS 0 0 0 5957 37090.9765625 0.0755753692725011 3 -0.2543373107910156 1 Unmodified _IEVNGKQSW_ chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;nc|ENSG00000111913|Q9Y4F9|RIPOR2 36.506200033944 0.094635877243972 1 {I|L}EVN 4 5 52.952 0.0 0.0 4.9976 0.0 0.0 0.0 601.2735079400999 601.2735079400999 39.45677228596267 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.6549471895720984 + {I|L}EVN 4.9976 + + 1203 + 1 2.109 88386.2 0.6800000071525574 2551 3405 5957 DOHH2_400M_050219_1,5958 DOHH2_400M_050219_1,5958,IEVNGKQSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5959 32.559 119.0 682820.0 25 0 77076.0 + 16607 KEALPKAAF 9 102 487.7870491938739 973.5595454545478 2 487.7871581912041 MULTI CID FTMS 0 0 0 5957 474142.625 0.6756654068252317 -1 0.0676193237304687 2 Unmodified _KEALPKAAF_ ENSG00000113141|ENST00000417647|IK;ENST00000515592.1_1_5:140041093-140041799:+|nuORF 61.60191391372663 0.0251951588191061 1 KEA{I|L}[HV]AAA 9 3 46.799 0.0 0.0 4.807 0.0 0.0 0.0 80.05121027164296 80.05121027164296 11.60007367640695 0.0 0.0 0.0 0 1.394599018282542 0.0 0.0 0.0 KEA{I|L}[HV]AAA 4.807 - 674 + 1 2.109 68269.2 1.0 2552 3405 5957 DOHH2_400M_050219_1,5959 DOHH2_400M_050219_1,5959,KEALPKAAF True True KEALPKAAF 32.55884 487.787158191204 3487944.25 5957.0 ENST00000515592.1_1_5:140041093-140041799:+|nuORF;;ENSG00000113141|ENST00000417647|IK 5.394233703613281 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5960 32.561 115.0 674230.0 25 0 128620.0 19094 LDSAGRVW 8 102 452.2379583109726 902.4613636887452 2 452.2379028201103 MULTI CID FTMS 0 0 0 5957 402186.75 0.529215984178263 -1 0.0676193237304687 3 Unmodified _LDSAGRVW_ ENSG00000188811|ENST00000379600|NHLRC3;nc|ENSG00000188811|Q5JS37-2|NHLRC3 20.453626601364224 0.6087503291685402 1 {I|L}DSQ[RV]W 7 2 + 44.512 0.0 0.0 4.9323 4.9323 79.888 0.0 0.0 0.0 31.41350813207744 0.8525765441177668 0.8525765441177668 5.351132016973494 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {I|L}DSQ[RV]W;{I|L}DSQ[WR]V;{I|L}DS[AG][RV]W;{I|L}DS[AG][WR]V 4.9323;4.3394;3.8984;3.3055 -;-;+;- + 186 + 1 2.109 64940.1 1.0 2553 3405 5957 DOHH2_400M_050219_1,5960 DOHH2_400M_050219_1,5960,LDSAGRVW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5961 32.566 267.0 476980.0 25 0 86625.0 20015 LIMNCCEQCGE 11 102 621.7325432561112 1241.4505335790222 2 621.7333251833916 MULTI CID FTMS 0 0 0 5957 343589.0 0.3652447735225204 -2 0.1242637634277343 4 Unmodified _LIMNCCEQCGE_ ENSG00000121741|ENST00000610343|ZMYM2;ENST00000382881.7_1_13:20532931-20593821:+|nuORF;nc|ENSG00000121741|Q9UBW7-2|ZMYM2 9.764250979337303 0.8290795630453686 1 {I|L}{I|L}DDMNH 7 9 98.849 0.0 0.0 7.9624 0.0 0.0 0.0 400.0639742486938 400.0639742486938 61.35229175257237 0.0 0.0 0.0 0 1.1989700043360187 2.0 0.3807196863200844 1.885151878060192 {I|L}{I|L}DDMNH 7.9624 - 260 + 1 2.109 97808.7 1.0 2554 3405 5957 DOHH2_400M_050219_1,5961 DOHH2_400M_050219_1,5961,LIMNCCEQCGE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5962 32.569 156.0 402930.0 25 0 32788.0 + 33546 SILKESLNL 9 104 508.80289296220445 1015.5912329912088 2 508.8029968142509 MULTI CID FTMS 0 0 0 5957 263251.6875 1.0 0 0.0 5 Unmodified _SILKESLNL_ ENSG00000143228|ENST00000271452|NUF2 38.17557092003332 0.0854718145212029 1 {[DS]|[MA]|[CV]|TT}AVRR{I|L}S{I|L} 9 6 + 39.332 0.0 0.0 3.8728 3.8728 75.992 0.0 0.0 0.0 5.000000000000007 12.594596432766146 5.000000000000007 5.000000000000007 0 0.0 1.3010299956639813 0.0 0.0 {[DS]|[MA]|[CV]|TT}AVRR{I|L}S{I|L};{[TV]|[{I|L}S]}[PA][KS]T{I|L}S{I|L};{[TV]|[{I|L}S]}[PA]{[MG]|[TS]}K{I|L}S{I|L};{[TV]|[{I|L}S]}AA[Q{I|L}]T{I|L}S{I|L};{[TV]|[{I|L}S]}AA[DV]K{I|L}S{I|L};{[TV]|[{I|L}S]}AA[WR]{I|L}S{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}VRR{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}{[TV]|[{I|L}S]}NK{I|L}S{I|L};{[DA]|[EG]}E[K{I|L}]K{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}{[TV]|[{I|L}S]}GGK{I|L}S{I|L} 3.8728;3.3804;3.2574;3.2071;3.084;3.0337;2.2503;1.8759;1.732;0.96919 -;-;-;-;-;-;-;-;-;- 480 1 2.109 52021.9 1.0 2555 3405 5957 DOHH2_400M_050219_1,5962 DOHH2_400M_050219_1,5962,SILKESLNL True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5963 32.574 224.0 584090.0 25 0 101530.0 + 8533 ETERRMDFY 9 92 416.1890839047617 1245.5454223144852 3 416.1889526247978 MULTI CID FTMS 0 0 0 5957 239519.609375 0.6830764638999938 -1 0.0676193237304687 6 Unmodified _ETERRMDFY_ ENSG00000180354|ENST00000324453|MTURN;nc|ENSG00000180354|Q8N3F0-2|MTURN;nc|ENSG00000180354|Q8N3F0-4|MTURN 7.289230182591677 0.6602208344931196 1 Y 1 8 15.485 0.0 0.0 1.2432 0.0 0.0 1064.4712626238586 0.0 1064.4712626238586 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2432 + + 38 + 1 2.109 109165.0 1.0 2556 3405 5957 DOHH2_400M_050219_1,5963 DOHH2_400M_050219_1,5963,ETERRMDFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5964 32.577 197.0 426320.0 25 0 64808.0 + 8534 ETERRMDFY 9 82 623.7796488418542 1245.5447447505082 2 623.7798339724541 MULTI CID FTMS 0 0 0 5957 207915.40625 0.7401884020822709 -1 0.0676193237304687 7 Unmodified _ETERRMDFY_ ENSG00000180354|ENST00000324453|MTURN;nc|ENSG00000180354|Q8N3F0-2|MTURN;nc|ENSG00000180354|Q8N3F0-4|MTURN 24.020572477871973 0.2255576514309169 1 {M(Oxidation (M))|F}Y 2 7 20.573 0.0 0.0 1.6517 0.0 0.0 917.4024850842958 0.0 917.4024850842958 0.0 11.620768972555592 0.0 0.0 0 0.5 0.0 0.0 0.0 + {M(Oxidation (M))|F}Y 1.6517 + + 48 + 1 2.109 65337.6 1.0 2557 3405 5957 DOHH2_400M_050219_1,5964 DOHH2_400M_050219_1,5964,ETERRMDFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5965 32.582 224.0 338680.0 25 0 32943.0 + 688 AENAGSYSL 9 123 456.2087509626949 910.40294899219 2 456.2086974978447 MULTI CID FTMS 0 0 0 5957 196225.21875 0.7109825116975923 -1 0.0676193237304687 8 Unmodified _AENAGSYSL_ ENSG00000139372|ENST00000392872|TDG;ENST00000544060.1_1_12:104359692-104373925:+|nuORF 32.78568957990786 0.1150597335874693 1 {[CP]|[EA]}NAGSYS{I|L} 9 0 {[CP]|[EA]}NAGSY + + 24.024 27.297 3.9431 2.6388 2.6388 49.708 0.0 0.0 0.0 0.0 -8.035651279335852 -8.035651279335852 0.0 0 0.0 0.0 0.3054621874040891 0.0 + + {[CP]|[EA]}NAGSYS{I|L} 2.6388 + + 152 + 1 2.109 63225.2 1.0 2558 3405 5957 DOHH2_400M_050219_1,5965 DOHH2_400M_050219_1,5965,AENAGSYSL True True AENAGSYSL 32.581513 456.208697497845 1567922.625 5957.0 ENSG00000139372|ENST00000392872|TDG;;ENST00000544060.1_1_12:104359692-104373925:+|nuORF 5.088699022928874 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5966 32.589 436.0 207550.0 25 0 12431.0 + 32676 SDFRKDDFY 9 111 596.7669182914232 1191.5192836496462 2 596.7671996951103 MULTI CID FTMS 0 0 0 5957 157340.34375 1.0 0 0.0 9 Unmodified _SDFRKDDFY_ ENSG00000028203|ENST00000436874|VEZT;ENST00000547997.5_1_12:95650374-95694446:+|nuORF;ENST00000549192.5_1_12:95650374-95690042:+|nuORF;ENST00000552660.5_1_12:95650374-95694446:+|nuORF;nc|ENSG00000028203|Q9HBM0-2|VEZT 31.26834338654808 0.1333407332142048 1 {[DS]|[MA]|[CV]|TT}R{M(Oxidation (M))|F}RSD{M(Oxidation (M))|F}Y 9 3 + 47.022 0.0 0.0 3.9464 3.9464 73.538 0.0 0.0 0.0 2.875240784723374 14.09256854528806 2.875240784723374 2.875240784723374 0 1.5924778212679485 0.0 0.7302046884880937 0.3494850021680094 {[DS]|[MA]|[CV]|TT}R{M(Oxidation (M))|F}RSD{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RRDSD{M(Oxidation (M))|F}Y;{[DS]|[MA]|[CV]|TT}[VG]{M(Oxidation (M))|F}RSD{M(Oxidation (M))|F}Y;{[CA]|SS}{[TV]|[{I|L}S]}MRSD{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}{[CA]|SS}MRSD{M(Oxidation (M))|F}Y;{[CA]|SS}[PS]{M(Oxidation (M))|F}RSD{M(Oxidation (M))|F}Y;{[DS]|[MA]|[CV]|TT}R{[RE]|[WV]}[YG]{M(Oxidation (M))|F}Y;{[DS]|[MA]|[CV]|TT}R{M(Oxidation (M))|F}R{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RRD{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}Y;[{M(Oxidation (M))|F}T]Y{[QG]|[NA]}{I|L}[PG]{M(Oxidation (M))|F}Y 3.9464;3.7051;3.1736;3.1643;2.922;2.7639;1.8755;1.8456;1.6043;1.5652 -;-;-;-;-;-;-;-;-;- 261 1 2.109 73531.3 1.0 2559 3405 5957 DOHH2_400M_050219_1,5966 DOHH2_400M_050219_1,5966,SDFRKDDFY False True SDFRKDDFY 32.589282 596.76719969511 798883.3125 5957.0 ENST00000552660.5_1_12:95650374-95694446:+|nuORF;;ENST00000547997.5_1_12:95650374-95694446:+|nuORF;;ENST00000549192.5_1_12:95650374-95690042:+|nuORF;;ENSG00000028203|ENST00000436874|VEZT;;nc|ENSG00000028203|Q9HBM0-2|VEZT 3.620961825052897 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5967 32.598 497.0 160610.0 25 0 13366.0 + 7085 EELQKIYKTY 10 104 438.90278489524616 0 438.9026672244072 PEAK CID FTMS 0 0 0 5957 127510.671875 1.0 0 0.0 10 Unmodified _EELQKIYKTY_ ENSG00000135317|ENST00000314673|SNX14;nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14 21.799462835604743 0.2837773838129607 1 K{I|L}YKT 5 5 18.742 0.0 0.0 2.14 0.0 0.0 61.332537239937615 178.05115686588127 239.38369410581888 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8609243748081782 0.0 + K{I|L}YKT 2.14 + + 53 + 1 2.109 71353.9 1.0 2560 3405 5957 DOHH2_400M_050219_1,5967 DOHH2_400M_050219_1,5967,EELQKIYKTY False True EELQKIYKTY 32.598042 438.902667224407 527344.5 5957.0 nc|ENSG00000135317|Q9Y5W7-2|SNX14;;nc|ENSG00000135317|Q9Y5W7-4|SNX14;;nc|ENSG00000135317|Q9Y5W7-3|SNX14;;ENSG00000135317|ENST00000314673|SNX14 3.96207865079244 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5968 32.606 357.0 446190.0 25 0 60771.0 + 7115 EEMKSGLKDF 10 175 395.19375032856976 1182.5594215859094 3 395.1937744021416 MULTI CID FTMS 0 0 0 5957 99360.7578125 0.2696027376909981 -1 0.0676193237304687 11 Unmodified _EEMKSGLKDF_ chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000187627|P0DJD0|RGPD1 32.037481411007896 0.2488723560272515 1 EEMKSG{I|L}KD{M(Oxidation (M))|F} 10 0 EE + + 50.559 13.199 5.1144 4.2754 4.2754 54.056 0.0 0.0 0.0 0.0 37.130200777316205 0.0 0.0 0 0.0 0.0 0.6237125054200234 0.4247425010840047 + + EEMKSG{I|L}KD{M(Oxidation (M))|F} 4.2754 + + 625 + 1 2.109 124997.5 1.0 2561 3405 5957 DOHH2_400M_050219_1,5968 DOHH2_400M_050219_1,5968,EEMKSGLKDF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5969 32.609 149.0 317220.0 25 0 61422.0 + 5495 DLSPRVTAV 9 70 479.2716053282571 956.5286577233144 2 479.2709838747978 MULTI CID FTMS 0 0 0 5957 104967.890625 0.261309650503455 -2 0.1242637634277343 12 Unmodified _DLSPRVTAV_ ENSG00000112159|ENST00000369393|MDN1 22.736283301280096 0.2418982879461534 1 {NN|[MP]|[D{I|L}]|[EV]}S 3 6 39.705 0.0 0.0 4.1509 0.0 0.0 0.0 638.3626610659096 638.3626610659096 16.919076829902156 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}S 4.1509 + + 21 + 1 2.109 39382.1 1.0 2562 3405 5957 DOHH2_400M_050219_1,5969 DOHH2_400M_050219_1,5969,DLSPRVTAV False True DLSPRVTAV 32.608619 479.270983874798 2008842.875 5957.0 ENSG00000112159|ENST00000369393|MDN1 4.387796243031819 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5970 32.616 399.0 294680.0 25 0 29020.0 + 7116 EEMKSGLKDF 10 139 592.2862940662164 1182.5580351992328 2 592.2866699099541 MULTI CID FTMS 0 0 0 5957 87753.9609375 0.3862142785968759 -1 0.0676193237304687 13 Unmodified _EEMKSGLKDF_ chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000187627|P0DJD0|RGPD1 51.487983226225225 0.0714176344394665 1 EEMKSG{I|L}KD{M(Oxidation (M))|F} 10 0 + 68.233 0.0 0.0 5.7699 5.7699 91.369 0.0 0.0 0.0 47.099826393067545 13.52182518111362 13.52182518111362 25.736101230390474 0 1.4291746928241125 1.6989700043360187 0.5774509799928715 0.3252574989159953 + + EEMKSG{I|L}KD{M(Oxidation (M))|F};EEMKSG{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[YR]SKM[HC];EEM[RH]S{[VA]|[{I|L}G]}PQ;EEM[RH]D[KA][PA];[DP][VP]{I|L}GSKM[HC];[KG]{[TV]|[{I|L}S]}KMDEE{M(Oxidation (M))|F};EE[VP]D{I|L}S{[VA]|[{I|L}G]}PQ;EE[VP]D{I|L}D[KA][PA];[KG]{[TV]|[{I|L}S]}MKDEE{M(Oxidation (M))|F} 5.7699;3.5936;1.8471;1.8445;1.7545;1.517;1.1974;1.1515;1.0615;1.0485 +;-;-;-;-;-;-;-;-;- + 1556 + 1 2.109 91424.9 1.0 2563 3405 5957 DOHH2_400M_050219_1,5970 DOHH2_400M_050219_1,5970,EEMKSGLKDF True True EEMKSGLKDF 32.615775 592.286669909954 3150506.375 5957.0 ENSG00000153201|ENST00000283195|RANBP2;;ENSG00000153165|ENST00000409886|RGPD3;;ENSG00000169629|ENST00000302558|RGPD8;;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;;ENSG00000015568|ENST00000016946|RGPD5;;ENSG00000185304|ENST00000398146|RGPD2;;ENSG00000187627|ENST00000641458|RGPD1;;ENSG00000183054|ENST00000329516|RGPD6;;ENSG00000196862|ENST00000408999|RGPD4;;nc|ENSG00000187627|P0DJD0|RGPD1 6.716207186381022 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5972 32.621 150.0 458920.0 25 0 47176.0 + 44030 YIIKDKHIL 9 97 381.5692996783865 1141.6860696353597 3 381.5691406130791 MULTI CID FTMS 0 0 0 5971 188749.328125 0.1895293361077514 2 -0.1772422790527343 1 Unmodified _YIIKDKHIL_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 22.65808497894818 0.2428932432760099 1 [Y{I|L}]{I|L}KD[HK]{I|L}{I|L} 9 0 + 41.728 0.0 0.0 3.6549 3.6549 84.722 0.0 0.0 0.0 28.23319315568533 4.269856214892371 4.269856214892371 41.72804317736543 0 0.2396518287104437 2.0 0.0 0.0 + + [Y{I|L}]{I|L}KD[HK]{I|L}{I|L} 3.6549 + + 109 + 1 2.109 59253.5 1.0 2564 3406 5971 DOHH2_400M_050219_1,5972 DOHH2_400M_050219_1,5972,YIIKDKHIL False True YIIKDKHIL 32.621294 381.569140613079 12250209.75 5971.0 ENST00000591595.5_1_19:11130023-11172489:+|nuORF;;ENSG00000080503|ENST00000349721|SMARCA2;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;nc|ENSG00000080503|P51531-2|SMARCA2;;ENSG00000127616|ENST00000344626|SMARCA4;;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 3.1231465339660645 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5973 32.624 122.0 368530.0 25 0 19759.0 + 5304 DLDHSIGTQY 10 84 574.7641875520728 1147.5138221709456 2 574.7646972537041 MULTI CID FTMS 0 0 0 5971 183476.453125 0.1073741668198603 3 -0.2322540283203125 2 Unmodified _DLDHSIGTQY_ ENSG00000092203|ENST00000448790|TOX4;nc|ENSG00000092203|O94842-2|TOX4 25.399314129420983 0.3980215340001851 1 G{I|L}D[RD]Y 6 7 21.661 0.0 0.0 1.8876 0.0 0.0 410.1821938878231 0.0 410.1821938878231 0.0 14.670846891215277 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 G{I|L}D[RD]Y 1.8876 - 134 + 1 2.109 39016.1 1.0 2565 3406 5971 DOHH2_400M_050219_1,5973 DOHH2_400M_050219_1,5973,DLDHSIGTQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5974 32.626 78.0 751830.0 25 0 164550.0 20016 LIMNCCEQCGE 11 84 414.8241202972191 1241.4505314918572 3 414.8244201540947 MULTI CID FTMS 0 0 0 5971 649845.5625 0.9947325006974348 -1 0.0770950317382812 3 Unmodified _LIMNCCEQCGE_ ENSG00000121741|ENST00000610343|ZMYM2;ENST00000382881.7_1_13:20532931-20593821:+|nuORF;nc|ENSG00000121741|Q9UBW7-2|ZMYM2 2.6312355333042263 0.8627335947654684 1 {I|L}{I|L}DDMNH 7 9 61.4 0.0 0.0 4.9459 0.0 0.0 0.0 400.0626314752563 400.0626314752563 39.00469768245635 0.0 0.0 0.0 0 0.25 2.0 0.4247425010840047 0.3807196863200844 {I|L}{I|L}DDMNH 4.9459 - 85 + 1 2.109 51971.1 1.0 2566 3406 5971 DOHH2_400M_050219_1,5974 DOHH2_400M_050219_1,5974,LIMNCCEQCGE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5975 32.628 104.0 1264900.0 25 0 357210.0 38506 TSLAQGNG 8 108 374.1859890370896 746.3574251409791 2 374.1861755251884 MULTI CID FTMS 0 0 0 5971 431100.8125 0.5905933021523445 -1 0.0770950317382812 4 Unmodified _TSLAQGNG_ ENSG00000106459|ENST00000393232|NRF1;nc|ENSG00000106459|Q16656-2|NRF1;nc|ENSG00000106459|Q16656-3|NRF1;nc|ENSG00000106459|Q16656-4|NRF1 5.230669730166228 0.792582437072536 1 Y 1 8 14.604 0.0 0.0 1.9567 0.0 0.0 565.2832959679307 0.0 565.2832959679307 0.0 7.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.9567 - 58 + 1 2.109 109614.8 1.0 2567 3406 5971 DOHH2_400M_050219_1,5975 DOHH2_400M_050219_1,5975,TSLAQGNG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5976 32.631 141.0 642870.0 25 0 67313.0 + 18440 KYFDEHYEY 9 93 647.2745931728801 1292.5346334125602 2 647.2750732302666 MULTI CID FTMS 0 0 0 5971 405418.5625 0.0064218460137178 -3 0.2013587951660156 5 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 103.41943736471065 0.0091853052135676 1 [YE]HD{M(Oxidation (M))|F}KYEY 9 4 + 84.412 0.0 0.0 6.5307 6.5307 82.301 0.0 0.0 0.0 3.54253472404838 3.54253472404838 3.54253472404838 2.825382125373949 0 0.7134679910804405 1.6989700043360187 0.9876954943324544 0.4247425010840047 [YE]HD{M(Oxidation (M))|F}KYEY;[YE]HAYRYEY;KY{M(Oxidation (M))|F}DEHYEY;KY{M(Oxidation (M))|F}DE[QA]TEY;[YE]HD{M(Oxidation (M))|F}YKEY;KY{M(Oxidation (M))|F}YY{[MS]|[{M(Oxidation (M))|F}A]}EY;[YE]HD{M(Oxidation (M))|F}YEKY;[YE]HAY[VG]YEY;[YE]H[Y{M(Oxidation (M))|F}]DKEY;KY{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}AYEY 6.5307;6.3121;6.2567;5.9918;5.7458;5.5807;5.2896;5.2711;5.2589;5.2313 -;-;+;-;-;-;-;-;-;- + 1989 1 2.109 74731.0 1.0 2568 3406 5971 DOHH2_400M_050219_1,5976 DOHH2_400M_050219_1,5976,KYFDEHYEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5977 32.633 125.0 416790.0 25 0 46181.0 + 6648 EAVPTLPGPL 10 91 497.2841228043346 992.5536926754692 2 497.2840453982353 MULTI CID FTMS 0 0 0 5971 231406.84375 0.4577489528208235 2 -0.1772422790527343 6 Unmodified _EAVPTLPGPL_ REV__ENSG00000139116|ENST00000361418|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-2|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-3|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-4|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-5|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A 21.74664581756881 0.480091245866545 1 Y{I|L}APGNP{I|L} 8 -1 22.829 0.0 0.0 2.3 0.0 0.0 149.1043651381629 0.0 149.1043651381629 0.0 8.136087843045061 0.0 0.0 0 0.3935078169319297 0.0 0.0 0.3054621874040891 Y{I|L}APGNP{I|L} 2.3 - 213 + 1 2.109 48265.2 1.0 2569 3406 5971 DOHH2_400M_050219_1,5977 DOHH2_400M_050219_1,5977,EAVPTLPGPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5978 32.637 210.0 423330.0 25 0 25616.0 + 32805 SEFFRSGKY 9 109 560.7747313801977 1119.5349098271954 2 560.7748901247978 MULTI CID FTMS 0 0 0 5971 250759.921875 0.595965958796942 -1 0.0770950317382812 7 Unmodified _SEFFRSGKY_ ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1 42.312485326615175 0.0627620958981271 1 {[MG]|[TS]}KHR{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 8 7 52.204 0.0 0.0 4.663 0.0 0.0 0.0 85.0184052708079 85.0184052708079 14.095019080956064 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.2742275032520141 0.9247425010840048 {[MG]|[TS]}KHR{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 4.663 - 442 1 2.109 70482.2 1.0 2570 3406 5971 DOHH2_400M_050219_1,5978 DOHH2_400M_050219_1,5978,SEFFRSGKY True True SEFFRSGKY 32.637229 560.774890124798 5283865.5 5971.0 ENST00000464920.1_1_1:8921421-8930582:-|nuORF;;ENSG00000074800|ENST00000234590|ENO1;;nc|ENSG00000074800|P06733-2|ENO1 6.468865076700847 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5979 32.64 161.0 475610.0 25 0 48049.0 + 36799 TEIDARAGTF 10 92 540.7687768299395 1079.523000726679 2 540.7712890505791 MULTI CID FTMS 0 0 0 5971 243391.421875 0.3910931531279466 -1 0.0770950317382812 8 Unmodified _TEIDARAGTF_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 23.78978130925829 0.4341852049148378 1 HAD{I|L}[DP] 6 9 24.882 0.0 0.0 2.3049 0.0 0.0 413.2160816876969 0.0 413.2160816876969 0.0 10.278193816289232 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 HAD{I|L}[DP] 2.3049 - 98 1 2.109 64408.9 1.0 2571 3406 5971 DOHH2_400M_050219_1,5979 DOHH2_400M_050219_1,5979,TEIDARAGTF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5980 32.649 511.0 202090.0 25 0 15560.0 + 43331 WLSLLSSWD 9 134 553.7776684172977 0 553.7781860232353 PEAK CID FTMS 0 0 0 5971 164348.359375 0.8265706484334812 -1 0.0770950317382812 9 Unmodified _WLSLLSSWD_ nc|ENSG00000160087|Q8N2K1-3|UBE2J2 34.10243960390752 0.0907105591560806 1 DS{I|L}GSGKE 8 6 63.279 0.0 0.0 5.7238 0.0 0.0 204.09063457290205 125.07225977115468 329.1628943440567 0.0 0.0 0.0 0.0 0 2.1237125054200234 0.0 1.5044321917401078 1.1861818737241734 DS{I|L}GSGKE 5.7238 - 313 + 1 2.109 78753.8 1.0 2572 3406 5971 DOHH2_400M_050219_1,5980 DOHH2_400M_050219_1,5980,WLSLLSSWD True False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 5981 32.659 573.0 192350.0 25 0 13474.0 + 797 AESNSISKW 9 146 511.24978125371047 1020.485009574221 2 511.2515136599541 MULTI CID FTMS 0 0 0 5971 108421.8515625 0.8650402850307732 -1 0.0770950317382812 10 Unmodified _AESNSISKW_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 31.26834338654808 0.1333407332142048 1 {[CP]|[EA]}SN{[TV]|[{I|L}S]}SKW 9 0 + 42.413 0.0 0.0 4.1561 4.1561 72.591 0.0 0.0 0.0 27.18769725589926 12.252684618815088 12.252684618815088 1.6773532018394377 0 0.8494850021680094 0.0 0.0 0.3494850021680094 + + {[CP]|[EA]}SN{[TV]|[{I|L}S]}SKW;{[ES]|[DT]|[{I|L}C]}AN{[TV]|[{I|L}S]}SKW;{[CP]|[EA]}SD[KA]SKW;{[ES]|[DT]|[{I|L}C]}AD[KA]SKW;{[CP]|[EA]}S[WK]SKW;{[ES]|[DT]|[{I|L}C]}A[WK]SKW;{[ES]|[DT]|[{I|L}C]}NA{[TV]|[{I|L}S]}SKW;{[CP]|[EA]}SGG{[TV]|[{I|L}S]}SKW;{[ES]|[DT]|[{I|L}C]}AGG{[TV]|[{I|L}S]}SKW;{[ES]|[DT]|[{I|L}C]}W[KA]SKW 4.1561;3.9918;3.8611;3.6968;3.5213;3.3569;3.2806;3.2538;3.0894;2.6457 +;-;-;-;-;-;-;-;-;- + 677 + 1 2.109 88730.3 1.0 2573 3406 5971 DOHH2_400M_050219_1,5981 DOHH2_400M_050219_1,5981,AESNSISKW False True AESNSISKW 32.659464 511.251513659954 1063171.0 5971.0 nc|ENSG00000163939|Q86U86-7|PBRM1;;ENSG00000163939|ENST00000707071|PBRM1;;nc|ENSG00000163939|Q86U86-8|PBRM1;;nc|ENSG00000163939|Q86U86-4|PBRM1;;nc|ENSG00000163939|Q86U86-5|PBRM1;;nc|ENSG00000163939|Q86U86|PBRM1;;nc|ENSG00000163939|Q86U86-2|PBRM1;;nc|ENSG00000163939|Q86U86-3|PBRM1;;nc|ENSG00000163939|Q86U86-9|PBRM1 5.189017613728841 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5982 32.668 486.0 215050.0 25 0 34004.0 + 6335 DVKRIAEL 8 145 472.28090931534086 942.5472656974816 2 472.2806579470634 MULTI CID FTMS 0 0 0 5971 129817.359375 1.0 0 0.0 11 Unmodified _DVKRIAEL_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 24.99096001346401 0.5185035129578945 1 DVK 3 5 47.945 0.0 0.0 5.0868 0.0 0.0 0.0 597.3375338190061 597.3375338190061 16.693487739749926 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + DVK 5.0868 + + 262 + 1 2.109 83515.0 1.0 2574 3406 5971 DOHH2_400M_050219_1,5982 DOHH2_400M_050219_1,5982,DVKRIAEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5983 32.674 336.0 325510.0 25 0 29672.0 + 94 AAHVSRVIL 9 111 483.2983672029748 964.5821814727497 2 483.2985717654228 MULTI CID FTMS 0 0 0 5971 100689.6171875 0.486618315463097 -1 0.0770950317382812 12 Unmodified _AAHVSRVIL_ ENSG00000106628|ENST00000610533|POLD2 43.77239144664712 0.0547478964384323 1 AAHV 4 5 42.039 0.0 0.0 4.3583 0.0 0.0 0.0 583.3575243275676 583.3575243275676 8.99166239860314 0.0 0.0 0.0 0 1.1861818737241734 1.3979400086720375 0.0 0.0 + AAHV 4.3583 + + 186 + 1 2.109 87902.9 1.0 2575 3406 5971 DOHH2_400M_050219_1,5983 DOHH2_400M_050219_1,5983,AAHVSRVIL True True AAHVSRVIL 32.674129 483.298571765423 1213161.0 5971.0 ENSG00000106628|ENST00000610533|POLD2 4.208869218826294 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5984 32.688 800.0 202640.0 25 0 13009.0 + -1 LNNEMCELLRL 11 140 702.849391383275 1403.68422983335 2 702.8469726443291 MULTI CID FTMS 0 0 0 5971 90619.3046875 0.4659614272170713 -2 0.14471435546875 13 Carbamidomethyl (C) _LNNEMC(Carbamidomethyl (C))ELLRL_ REV__nc|ENSG00000228970|P0CB48|UBTFL6 55.50274090549119 0.0873970505193986 1 {[QV]|[N{I|L}]|[RA]|[KV]}NEEN{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q 12 -1 + 112.45 0.0 0.0 8.0111 8.0111 88.602 0.0 0.0 0.0 18.230978772720547 0.0 0.0 5.616871254545799 0 1.924742501084005 2.0 0.4247425010840047 2.416386562212267 {[QV]|[N{I|L}]|[RA]|[KV]}NEEN{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEA[DG]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}NEEN{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEGG{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}GGEEN{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}NEA[DG]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}NEA[R{M(Oxidation (M))|F}]WN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEE[{M(Oxidation (M))|F}V]ANN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEGG{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}GGEEN{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q 8.0111;7.6109;7.5055;7.3629;7.3629;7.1032;6.9816;6.8647;6.8552;6.8552 -;-;-;-;-;-;-;-;-;- 3249 1 2.109 114800.2 0.5799999833106995 2576 3406 5971 DOHH2_400M_050219_1,5984 DOHH2_400M_050219_1,5984,LNNEMCELLRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5985 32.691 92.0 252970.0 25 0 18423.0 -1 ISQYRFSTCVL 11 53 687.3496384694239 0 687.3495971560478 PEAK CID FTMS 0 0 0 5971 393697.25 1.0 0 0.0 14 Carbamidomethyl (C) _ISQYRFSTC(Carbamidomethyl (C))VL_ ENST00000594154.5_1_19:52536841-52536970:-|nuORF 5.296884461304476 0.47618401536486 1 ETYE 4 -1 17.167 0.0 0.0 1.2506 0.0 0.0 400.2328469270206 447.23505579166255 847.4679027186831 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ETYE 1.2506 - 31 + 1 2.109 24896.3 1.0 2577 3406 5971 DOHH2_400M_050219_1,5985 DOHH2_400M_050219_1,5985,ISQYRFSTCVL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 5987 32.697 66.0 827710.0 25 0 43651.0 + 7388 EGGIVSKNF 9 83 475.7509227224404 949.4872925116808 2 475.7509643435478 MULTI CID FTMS 0 0 0 5986 695730.4375 0.1920475020045478 2 -0.1568641662597656 1 Unmodified _EGGIVSKNF_ ENSG00000152137|ENST00000281938|HSPB8 68.08070601005525 0.0218408846571049 1 {[DA]|[EG]}G{I|L}VSKN{M(Oxidation (M))|F} 9 0 {[DA]|[EG]}G{I|L} + + 33.153 24.201 6.7948 3.4917 3.4917 51.668 0.0 0.0 0.0 0.0 8.952176730645064 0.0 0.0 0 0.3494850021680094 0.0 0.2614393726401688 0.9876954943324544 + + {[DA]|[EG]}G{I|L}VSKN{M(Oxidation (M))|F} 3.4917 + + 189 + 1 2.114 47634.4 1.0 2578 3407 5986 DOHH2_400M_050219_1,5987 DOHH2_400M_050219_1,5987,EGGIVSKNF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5988 32.699 134.0 254860.0 25 0 21224.0 + 2521 ASDKETYELRY 11 58 458.8894486123448 1373.6465164372344 3 458.8894836306572 MULTI CID FTMS 0 0 0 5986 274397.15625 0.3069480148254407 2 -0.1568641662597656 2 Unmodified _ASDKETYELRY_ ENSG00000163584|ENST00000295830|RPL22L1 49.74193281347159 0.1190592179673825 1 {[WS]|[C(Carbamidomethyl (C)){I|L}]}KETYE{I|L}H 9 4 64.614 0.0 0.0 4.7038 0.0 0.0 0.0 197.0926912897094 197.0926912897094 52.43501263708417 0.0 0.0 0.0 0 0.8494850021680094 0.0 1.1989700043360187 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}KETYE{I|L}H 4.7038 - 410 + 1 2.114 32874.3 1.0 2579 3407 5986 DOHH2_400M_050219_1,5988 DOHH2_400M_050219_1,5988,ASDKETYELRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5989 32.701 12.0 5595700.0 25 0 1525100.0 + 18444 KYFDEHYEY 9 79 431.8524612424013 1292.535554327404 3 431.8524352908134 MULTI CID FTMS 0 0 0 5986 3550556.25 0.1276220790714536 -2 0.1524848937988281 3 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 49.93300154707207 0.0405168250806675 1 [YK]{M(Oxidation (M))|F}DEH 6 3 34.606 0.0 0.0 2.6773 0.0 0.0 0.0 470.15507091652427 470.15507091652427 13.186566457631898 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.6307196863200843 1.0189301784845295 + [YK]{M(Oxidation (M))|F}DEH 2.6773 + + 231 1 2.114 60283.3 1.0 2580 3407 5986 DOHH2_400M_050219_1,5989 DOHH2_400M_050219_1,5989,KYFDEHYEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5990 32.703 117.0 398030.0 25 0 47520.0 + 16691 KEQQQQQMW 9 88 617.2876496858672 1232.5607464385344 2 617.2881347537041 MULTI CID FTMS 0 0 0 5986 378145.9375 0.3131668337314904 -2 0.1524848937988281 4 Unmodified _KEQQQQQMW_ ENSG00000145088|ENST00000273668|EAF2 69.10491478415734 0.0214449631113747 1 QQQQMW 6 3 70.182 0.0 0.0 5.694 0.0 0.0 385.19465834785314 0.0 385.19465834785314 0.0 43.84247108427221 0.0 0.0 0 0.9247425010840048 0.0 0.0 2.1549471895720984 + QQQQMW 5.694 + + 286 1 2.114 39986.7 1.0 2581 3407 5986 DOHH2_400M_050219_1,5990 DOHH2_400M_050219_1,5990,KEQQQQQMW True True KEQQQQQMW 32.702962 617.288134753704 6553562.5 5986.0 ENSG00000145088|ENST00000273668|EAF2 7.048829714457194 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5991 32.706 152.0 496320.0 25 0 39405.0 + 762 AERDVYTGDAL 11 97 605.2909893693826 1208.567425805565 2 605.2911254763603 MULTI CID FTMS 0 0 0 5986 373011.6875 0.4716246232178711 -1 0.0753898620605468 5 Unmodified _AERDVYTGDAL_ ENSG00000008018|ENST00000262193|PSMB1 22.774965066869 0.5574395181959457 1 VYTGDA{I|L} 7 4 63.532 0.0 0.0 5.2568 0.0 0.0 471.2097340314469 0.0 471.2097340314469 0.0 41.6422073900408 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 + VYTGDA{I|L} 5.2568 + + 585 1 2.114 58997.2 1.0 2582 3407 5986 DOHH2_400M_050219_1,5991 DOHH2_400M_050219_1,5991,AERDVYTGDAL False True AERDVYTGDAL 32.705995 605.29112547636 4476460.0 5986.0 ENSG00000008018|ENST00000262193|PSMB1 7.105221589406331 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5992 32.709 162.0 400680.0 25 0 33762.0 + 45364 YSSPYPQEY 9 102 567.2428571811719 1132.4711614291436 2 567.2430908083916 MULTI CID FTMS 0 0 0 5986 340810.46875 0.4596845481340557 -2 0.1524848937988281 6 Unmodified _YSSPYPQEY_ ENSG00000083168|ENST00000265713|KAT6A;ENSG00000156650|ENST00000287239|KAT6B;ENST00000490365.1_1_10:76737066-76741701:+|nuORF;nc|ENSG00000156650|Q8WYB5-2|KAT6B;nc|ENSG00000156650|Q8WYB5-3|KAT6B 81.61307344734483 0.0171259190214613 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SST 5 7 37.224 0.0 0.0 3.2869 0.0 0.0 0.0 594.2192738669814 594.2192738669814 4.814309196763702 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 1.1549471895720984 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SST 3.2869 - 546 1 2.114 55436.5 1.0 2583 3407 5986 DOHH2_400M_050219_1,5992 DOHH2_400M_050219_1,5992,YSSPYPQEY True True YSSPYPQEY 32.709193 567.243090808392 4878178.0 5986.0 ENSG00000156650|ENST00000287239|KAT6B;;nc|ENSG00000156650|Q8WYB5-2|KAT6B;;ENSG00000083168|ENST00000265713|KAT6A;;nc|ENSG00000156650|Q8WYB5-3|KAT6B;;ENST00000490365.1_1_10:76737066-76741701:+|nuORF 9.83500067392985 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5993 32.715 291.0 238580.0 25 0 14029.0 + 411 AEEEIMKKI 9 111 545.7940894926339 1089.5736260520678 2 545.7943603396416 MULTI CID FTMS 0 0 0 5986 205361.140625 1.0 0 0.0 7 Unmodified _AEEEIMKKI_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000454907.1_1_6:167115266-167115902:-|nuORF 41.95555342248728 0.0647214845423414 1 {[CP]|[EA]}EE{I|L}MKK{I|L} 9 0 {[CP]|[EA]} + + 48.933 3.7236 1.8611 4.491 4.491 54.806 0.0 0.0 0.0 0.0 24.29129463237757 0.0 0.0 0 1.774227503252014 0.0 0.0 0.0 + + {[CP]|[EA]}EE{I|L}MKK{I|L} 4.491 + + 719 + 1 2.114 56644.2 1.0 2584 3407 5986 DOHH2_400M_050219_1,5993 DOHH2_400M_050219_1,5993,AEEEIMKKI True True AEEEIMKKI 32.714535 545.794360339642 1434967.75 5986.0 ENSG00000136231|ENST00000258729|IGF2BP3;;ENST00000454907.1_1_6:167115266-167115902:-|nuORF 4.410457928975423 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5994 32.719 212.0 347000.0 25 0 13091.0 + 29099 QEPDFEEKRF 10 96 442.2103173350175 1323.6091226052529 3 442.2104980349541 MULTI CID FTMS 0 0 0 5986 205208.5625 1.0 0 0.0 8 Unmodified _QEPDFEEKRF_ ENSG00000158545|ENST00000301011|ZC3H18 14.837902256254086 0.5985764230743269 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}EEK{M(Oxidation (M))|F}R 10 2 + 40.706 0.0 0.0 3.0754 3.0754 69.363 0.0 0.0 0.0 5.3667494562513625 1.4940138256772713 1.4940138256772713 1.4940138256772713 0 0.0 0.0 0.3807196863200844 0.2742275032520141 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}EEK{M(Oxidation (M))|F}R;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}EH[{I|L}V][NP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[DP]EEK{M(Oxidation (M))|F}R;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[DP]EH[{I|L}V][NP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}[YC(Carbamidomethyl (C))][{I|L}P]R;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}[HQ]{[NV]|[RG]}[NP] 3.0754;2.9625;1.6588;1.5459;0.89879;0.8333 -;-;-;-;-;- 225 + 1 2.114 67865.7 1.0 2585 3407 5986 DOHH2_400M_050219_1,5994 DOHH2_400M_050219_1,5994,QEPDFEEKRF False True QEPDFEEKRF 32.718545 442.210498034954 6121262.0 5986.0 ENSG00000158545|ENST00000301011|ZC3H18 8.214895566304525 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5995 32.732 800.0 332770.0 25 0 26859.0 + -1 FKSQCHHYFAY 11 128 744.3310410826772 1486.6475292321545 2 744.3307372927666 MULTI CID FTMS 0 0 0 5986 202956.421875 0.3003637466361379 -2 0.1524848937988281 9 Carbamidomethyl (C) _FKSQC(Carbamidomethyl (C))HHYFAY_ REV__nc|ENSG00000118971|P30279-2|CCND2 8.745405648335112 0.8338865417133445 1 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y 14 -1 + 102.66 0.0 0.0 6.9055 6.9055 81.922 0.0 0.0 0.0 1.7259109034058042 11.504697682456367 1.7259109034058042 1.7259109034058042 0 0.8935078169319297 0.7958800173440752 0.5891368308784531 2.274227503252014 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGAE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGAE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQ{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{M(Oxidation (M))|F}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F}Y 6.9055;6.7894;6.6225;6.6171;6.501;6.4244;6.3139;6.2967;6.2967;6.2967 -;-;-;-;-;-;-;-;-;- 27025 1 2.114 187033.2 0.8199999928474426 2586 3407 5986 DOHH2_400M_050219_1,5995 DOHH2_400M_050219_1,5995,FKSQCHHYFAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 5996 32.737 251.0 250130.0 25 0 32221.0 + 40395 VIDQQNGLY 9 107 525.2665423246633 1048.5185317161263 2 525.2669555544853 MULTI CID FTMS 0 0 0 5986 162278.4375 0.1205294251011183 -3 0.2201042175292968 10 Unmodified _VIDQQNGLY_ ENSG00000132383|ENST00000254719|RPA1 16.942295170755138 0.3780752226737986 1 [{I|L}V]D[TP][DN]{I|L}Y 9 3 [{I|L}V]D[TP][DN]{I|L} + + 16.99 9.7147 1.1199 1.6204 1.6204 48.62 0.0 0.0 0.0 0.0 -0.9691001300805624 -0.9691001300805624 0.0 0 0.0 0.0 0.0 0.0 [{I|L}V]D[TP][DN]{I|L}Y 1.6204 - 86 + 1 2.114 52766.4 1.0 2587 3407 5986 DOHH2_400M_050219_1,5996 DOHH2_400M_050219_1,5996,VIDQQNGLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5997 32.742 257.0 163760.0 25 0 18811.0 41261 VPGRSPGLPI 10 76 496.7981061034085 991.581659273617 2 496.7979308962822 MULTI CID FTMS 0 0 0 5986 126377.0390625 0.4377046431011328 2 -0.1568641662597656 11 Unmodified _VPGRSPGLPI_ ENSG00000165478|ENST00000298251|HEPACAM 5.731851221503515 0.7001233259664787 1 {I|L}P{I|L} 3 7 16.382 0.0 0.0 1.6521 0.0 0.0 650.3498402326187 0.0 650.3498402326187 0.0 3.618143274997333 0.0 0.0 0 0.5924778212679485 0.0 0.0 0.0 + {I|L}P{I|L} 1.6521 + + 69 1 2.114 36688.7 1.0 2588 3407 5986 DOHH2_400M_050219_1,5997 DOHH2_400M_050219_1,5997,VPGRSPGLPI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5998 32.752 556.0 163110.0 25 0 11836.0 + 648 AELRSPNEF 9 131 531.7633193482533 1061.5120857633065 2 531.7646972537041 MULTI CID FTMS 0 0 0 5986 122225.4921875 1.0 0 0.0 12 Unmodified _AELRSPNEF_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000577409.1_1_18:72183591-72185955:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 49.55428908609986 0.0413471690215031 1 EAE{M(Oxidation (M))|F} 4 6 29.68 0.0 0.0 2.7961 0.0 0.0 567.3135853498062 0.0 567.3135853498062 0.0 10.89176226044195 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 EAE{M(Oxidation (M))|F} 2.7961 - 562 1 2.114 73148.9 1.0 2589 3407 5986 DOHH2_400M_050219_1,5998 DOHH2_400M_050219_1,5998,AELRSPNEF True True AELRSPNEF 32.751601 531.764697253704 658326.0625 5986.0 ENSG00000133313|ENST00000324262|CNDP2;;nc|ENSG00000133313|Q96KP4-2|CNDP2;;ENST00000577409.1_1_18:72183591-72185955:+|nuORF 5.75067933400472 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 5999 32.758 281.0 331440.0 25 0 29240.0 + 35211 SSDPASQLSY 10 137 527.7379976938034 1053.4614424544068 2 527.7368041872978 MULTI CID FTMS 0 0 0 5986 111063.109375 0.0196142288672358 -6 0.5151519775390625 13 Unmodified _SSDPASQLSY_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000536066.1_1_12:2967806-2973707:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 110.6747026088012 0.0022459829274162 1 {[C(Carbamidomethyl (C))E]|[WC]}PASQ{I|L}SY 9 3 + 48.967 0.0 0.0 4.6482 4.6482 73.019 0.0 0.0 0.0 0.6292267246688681 4.392653074926045 0.6292267246688681 0.6292267246688681 0 1.5317183090963749 0.0 1.6237125054200234 0.0 {[C(Carbamidomethyl (C))E]|[WC]}PASQ{I|L}SY;{[CA]|SS}DPASQ{I|L}SY;[PA]SDSSQ{I|L}SY;[HM]{I|L}Q[{M(Oxidation (M))|F}E]SY;[PA]SQ{[C(Carbamidomethyl (C))E]|[WC]}{I|L}SY;[PA]DSSSQ{I|L}SY;[PA]SQ{I|L}S{[DS]|[MA]|[CV]|TT}SY;[PA]SQD{[CA]|SS}{I|L}SY;[DP]ASSSQ{I|L}SY;{[C(Carbamidomethyl (C))E]|[WC]}PAS[AG]{I|L}SY 4.6482;4.5885;4.3872;4.2312;4.1547;3.9331;3.9186;3.8255;3.7965;3.7741 -;+;-;-;-;-;-;-;-;- + 1476 1 2.114 72464.9 1.0 2590 3407 5986 DOHH2_400M_050219_1,5999 DOHH2_400M_050219_1,5999,SSDPASQLSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6000 32.772 800.0 109580.0 25 0 4735.0 + 34300 SLRIERHCDYW 11 144 739.355375135935 0 739.7830688357353 PEAK CID FTMS 0 0 0 5986 14505.626953125 0.3981730709741602 -1 0.0753898620605468 14 Unmodified _SLRIERHCDYW_ REV__ENSG00000064703|ENST00000369702|DDX20 5.296884461304476 0.47618401536486 1 YEY 3 -1 16.682 0.0 0.0 1.1297 0.0 0.0 755.4314401138637 263.07892786197505 1018.5103679758388 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 YEY 1.1297 - 104 + 1 2.114 65400.6 0.5199999809265137 2591 3407 5986 DOHH2_400M_050219_1,6000 DOHH2_400M_050219_1,6000,SLRIERHCDYW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6001 32.78 441.0 240930.0 25 0 40825.0 27489 PKGSVLGP 8 142 377.7256505671082 753.4367482010164 2 377.7250549197197 MULTI CID FTMS 0 0 0 5986 90166.578125 0.3037002984553056 -22 1.620100021362305 15 Unmodified _PKGSVLGP_ ENST00000293973.1_1_16:2521551-2521797:+|nuORF 2.577480529830294 0.808687252328423 1 Y 1 8 11.259 0.0 0.0 1.4944 0.0 0.0 572.3630920504289 0.0 572.3630920504289 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4944 - 36 + 1 2.114 85897.7 1.0 2592 3407 5986 DOHH2_400M_050219_1,6001 DOHH2_400M_050219_1,6001,PKGSVLGP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6002 32.793 800.0 83286.0 25 0 9316.3 -1 YDENWFYTRAG 11 104 732.3145639975817 0 732.3156616091728 PEAK CID FTMS 0 0 0 5986 85240.25 1.0 0 0.0 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))YDENWFYTRAG_ chr19:41861212-41878990|19|10.11|0.3|5.08|+|2|RPS19,CD79A|1 2.9952420565917617 0.4761840153648598 1 ANQQAED 7 -1 34.201 0.0 0.0 2.3383 0.0 0.0 328.14664443943803 375.1409090631469 703.287553502585 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 ANQQAED 2.3383 - 240 + 1 2.114 51630.2 0.5099999904632568 2593 3407 5986 DOHH2_400M_050219_1,6002 DOHH2_400M_050219_1,6002,YDENWFYTRAG False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 6004 32.798 76.0 690820.0 25 0 93427.0 + 44002 YIDQGRNPQLY 11 62 683.8415456704109 1365.6685384076218 2 683.8416015505791 MULTI CID FTMS 0 0 0 6003 728855.0 0.6195135659769241 1 -0.0550117492675781 1 Unmodified _YIDQGRNPQLY_ ENSG00000133398|ENST00000255764|MED10;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 38.61474834105838 0.2337350513322792 1 [Y{I|L}]DKNT 6 7 58.421 0.0 0.0 4.2779 0.0 0.0 0.0 628.2718599908811 628.2718599908811 22.44772724483049 0.0 0.0 0.0 0 1.305462187404089 2.0 0.4247425010840047 0.3494850021680094 [Y{I|L}]DKNT 4.2779 - 330 + 1 2.114 44950.7 1.0 2594 3408 6003 DOHH2_400M_050219_1,6004 DOHH2_400M_050219_1,6004,YIDQGRNPQLY False True YIDQGRNPQLY 32.797805 683.841601550579 18532394.0 6003.0 ENSG00000133398|ENST00000255764|MED10;;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 7.545448303222656 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6005 32.801 174.0 526040.0 25 0 159640.0 + 695 AENKVDVYGY 10 82 579.2778185755791 1156.541084217958 2 579.2778198122978 MULTI CID FTMS 0 0 0 6003 101641.84375 0.2263800403755532 2 -0.1322212219238281 2 Unmodified _AENKVDVYGY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 13.042465956692816 0.6287021003332052 1 GY 2 8 19.693 0.0 0.0 1.7027 0.0 0.0 918.4447535068238 0.0 918.4447535068238 0.0 14.208187539523747 0.0 0.0 0 0.5 0.0 0.0 0.0 + GY 1.7027 + + 43 + 1 2.114 74158.0 1.0 2595 3408 6003 DOHH2_400M_050219_1,6005 DOHH2_400M_050219_1,6005,AENKVDVYGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6006 32.802 43.0 6657800.0 25 0 861110.0 + 43764 YEHYANSTQ 9 138 556.7379595131977 1111.4613660931952 2 556.7375976443291 MULTI CID FTMS 0 0 0 6003 1167627.375 0.7379531428752906 -1 0.1018524169921875 3 Unmodified _YEHYANSTQ_ ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3;nc|ENSG00000070915|P55017-3|SLC12A3 41.8396318013385 0.0653578398400075 1 EYRYAE 6 7 67.982 0.0 0.0 6.1165 0.0 0.0 0.0 297.0998582361815 297.0998582361815 13.57840941039747 0.0 0.0 0.0 0 0.7059771852360797 1.0 1.024227503252014 0.7059771852360797 EYRYAE 6.1165 - 2653 + 1 2.114 211085.8 1.0 2596 3408 6003 DOHH2_400M_050219_1,6006 DOHH2_400M_050219_1,6006,YEHYANSTQ True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6007 32.805 148.0 843850.0 25 0 209660.0 8859 EYYRQQMEE 9 112 425.8490359085066 1274.52527832572 3 425.8489562869072 MULTI CID FTMS 0 0 0 6003 452476.65625 0.8972986817704864 -1 0.1018524169921875 4 Unmodified _EYYRQQMEE_ ENSG00000183576|ENST00000331768|SETD3 9.5439744041441 0.5815088571869578 1 [YK]{M(Oxidation (M))|F}DEH 6 7 37.258 0.0 0.0 2.9233 0.0 0.0 0.0 452.1446655107404 452.1446655107404 22.653798461237137 0.0 0.0 0.0 0 0.2302046884880938 0.0 0.9947026752325154 0.8633643341304672 [YK]{M(Oxidation (M))|F}DEH 2.9233 - 761 1 2.114 107464.4 1.0 2597 3408 6003 DOHH2_400M_050219_1,6007 DOHH2_400M_050219_1,6007,EYYRQQMEE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6008 32.81 221.0 453070.0 25 0 52822.0 + 33866 SLFEKKSL 8 109 476.2792713687838 950.5439898043676 2 476.2794067263603 MULTI CID FTMS 0 0 0 6003 276053.5 1.0 0 0.0 5 Unmodified _SLFEKKSL_ ENSG00000119487|ENST00000265960|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-5|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-6|MAPKAP1 45.69961567697781 0.159474709770503 1 S{I|L}{M(Oxidation (M))|F}KEKS{I|L} 8 2 + 85.132 0.0 0.0 8.9561 8.9561 89.005 0.0 0.0 0.0 69.72557018205279 11.000707439735322 11.000707439735322 4.874694260092184 0 0.7742275032520141 2.0 1.0994850021680094 0.0 S{I|L}{M(Oxidation (M))|F}KEKS{I|L};S{I|L}{M(Oxidation (M))|F}EKKS{I|L};S{I|L}{I|L}[YQ]KS{I|L};S{I|L}{M(Oxidation (M))|F}KKV{[ET]|[MV]};S{I|L}[VG]T{M(Oxidation (M))|F}KS{I|L};S{I|L}KK{M(Oxidation (M))|F}V{[ET]|[MV]} 8.9561;8.4433;6.0421;5.4993;4.8973;4.3458 -;+;-;-;-;- + 557 + 1 2.114 79932.7 1.0 2598 3408 6003 DOHH2_400M_050219_1,6008 DOHH2_400M_050219_1,6008,SLFEKKSL False True SLFEKKSL 32.809528 476.27940672636 1059587.625 6003.0 nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;;ENSG00000119487|ENST00000265960|MAPKAP1;;nc|ENSG00000119487|Q9BPZ7-6|MAPKAP1;;nc|ENSG00000119487|Q9BPZ7-5|MAPKAP1;;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1 3.4833779335021973 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6009 32.815 273.0 199290.0 25 0 15929.0 + 7245 EESGARINI 9 104 494.75665243153816 987.4987519298764 2 494.7559387087822 MULTI CID FTMS 0 0 0 6003 123356.9375 0.0996810849314271 2 -0.1322212219238281 6 Unmodified _EESGARINI_ ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000498121.1_1_21:47289198-47321357:+|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 46.020951573049366 0.0490941689151868 1 EESGA[R{I|L}]N{I|L} 9 0 + 46.34 0.0 0.0 4.6926 4.6926 74.498 0.0 0.0 0.0 31.735703189660853 5.353350071374621 5.353350071374621 1.706962271689747 0 0.3054621874040891 2.0 0.3494850021680094 0.25 + + EESGA[R{I|L}]N{I|L};EESQ[R{I|L}]N{I|L};EESGA[R{I|L}]GG{I|L};EESQ[R{I|L}]GG{I|L} 4.6926;4.5198;3.507;3.3287 +;-;-;- + 123 + 1 2.114 43649.8 1.0 2599 3408 6003 DOHH2_400M_050219_1,6009 DOHH2_400M_050219_1,6009,EESGARINI True True EESGARINI 32.814553 494.755938708782 12066334.0 6003.0 nc|ENSG00000183570|P57721-5|PCBP3;;ENSG00000183570|ENST00000681687|PCBP3;;nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;ENST00000498121.1_1_21:47289198-47321357:+|nuORF;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000183570|P57721-3|PCBP3;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;nc|ENSG00000183570|P57721-2|PCBP3;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000197111|Q15366-7|PCBP2;;nc|ENSG00000183570|P57721-4|PCBP3;;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 4.803430239359538 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6010 32.819 216.0 400160.0 25 0 35373.0 + 7151 EENMRGVRF 9 99 379.8541494517791 1136.5406189555374 3 379.8539306521416 MULTI CID FTMS 0 0 0 6003 339311.59375 1.0 0 0.0 7 Unmodified _EENMRGVRF_ ENSG00000167658|ENST00000309311|EEF2 46.020951573049366 0.0490941689151868 1 EENMRRR{M(Oxidation (M))|F} 8 2 + 76.495 0.0 0.0 6.7305 6.7305 91.118 0.0 0.0 0.0 49.81298874902095 12.184290373512027 12.184290373512027 9.262137858390815 0 0.0 1.2218487496163564 0.0 1.1861818737241734 EENMRRR{M(Oxidation (M))|F};EENMR[VG]R{M(Oxidation (M))|F};EENM[VG]RR{M(Oxidation (M))|F};EEGGMRRR{M(Oxidation (M))|F};EENM[VG][VG]R{M(Oxidation (M))|F};EEGGMR[VG]R{M(Oxidation (M))|F};EEGGM[VG]RR{M(Oxidation (M))|F};EE{M(Oxidation (M))|F}N[KQ][VP]{M(Oxidation (M))|F};EEN{M(Oxidation (M))|F}[KQ][VP]{M(Oxidation (M))|F};EE{M(Oxidation (M))|F}N[KQ]{[ET]|[MV]}{I|L} 6.7305;5.9156;5.9156;5.9156;5.1054;5.1054;5.1054;3.3883;3.2794;2.7733 -;+;-;-;-;-;-;-;-;- + 155 + 1 2.114 74072.3 1.0 2600 3408 6003 DOHH2_400M_050219_1,6010 DOHH2_400M_050219_1,6010,EENMRGVRF True True EENMRGVRF 32.818643 379.853930652142 1495757.875 6003.0 ENSG00000167658|ENST00000309311|EEF2 4.461843967437744 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6011 32.821 105.0 581830.0 25 0 58150.0 + -1 ILIAAQTMK 9 85 502.79413228297057 0 502.7941772341728 PEAK CID FTMS 0 0 0 6003 326849.5625 0.7411439689250854 -1 0.1018524169921875 8 Oxidation (M) _ILIAAQTM(Oxidation (M))K_ REV__ENSG00000108509|ENST00000348066|CAMTA2;REV__ENSG00000171735|ENST00000303635|CAMTA1;REV__ENST00000574442.1_1_17:4872053-4872704:-|nuORF;REV__ENST00000574951.5_1_17:4872053-4885503:-|nuORF;REV__nc|ENSG00000108509|O94983-2|CAMTA2;REV__nc|ENSG00000108509|O94983-3|CAMTA2;REV__nc|ENSG00000108509|O94983-4|CAMTA2;REV__nc|ENSG00000108509|O94983-5|CAMTA2;REV__nc|ENSG00000108509|O94983-6|CAMTA2;REV__nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1 18.1463463914782 0.2188250594445807 1 T 1 -1 19.292 0.0 0.0 1.9223 0.0 0.0 293.1416675406413 606.3641451471311 899.5058126877725 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.0 T 1.9223 + + 117 + 1 2.114 49701.7 1.0 2601 3408 6003 DOHH2_400M_050219_1,6011 DOHH2_400M_050219_1,6011,ILIAAQTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6012 32.835 800.0 145360.0 25 0 7847.1 + 5389 DLKRKMIL 8 168 508.8195582630035 1015.624563592807 2 508.8189269900322 MULTI CID FTMS 0 0 0 6003 119934.875 1.0 0 0.0 9 Unmodified _DLKRKMIL_ ENSG00000073111|ENST00000265056|MCM2;ENST00000468414.1_1_3:127336783-127340613:+|nuORF;ENST00000474964.5_1_3:127323572-127340613:+|nuORF 25.399314129420983 0.5099049743284904 1 {I|L}DKH 4 6 36.987 0.0 0.0 3.6418 0.0 0.0 0.0 519.3309420221311 519.3309420221311 12.167760684934947 0.0 0.0 0.0 0 0.1421590589602531 1.6989700043360187 0.5 0.0 {I|L}DKH 3.6418 - 363 + 1 2.114 90097.4 0.6200000047683716 2602 3408 6003 DOHH2_400M_050219_1,6012 DOHH2_400M_050219_1,6012,DLKRKMIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6013 32.849 800.0 56457.0 25 0 5851.0 -1 0 40 1113.700610339642 0 1113.700610339642 PEAK CID FTMS 0 0 0 -1 0 10 1 EY 2 -1 9.464 0.0 0.0 0.42527 0.0 0.0 1113.9237690239952 816.3332003229124 1930.256969346908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EY 0.42527 - 6 + 1 2.114 36481.8 0.4900000095367431 2603 3408 6003 DOHH2_400M_050219_1,6013 DOHH2_400M_050219_1,6013, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6015 32.855 263.0 282920.0 25 0 48507.0 + 19108 LDSVLEDL 8 95 452.2379583109726 902.4613636887452 2 452.2381469607353 MULTI CID FTMS 0 0 0 6014 147920.46875 0.1946406152108224 3 -0.2723197937011719 1 Unmodified _LDSVLEDL_ REV__ENSG00000174611|ENST00000423778|KY;REV__ENST00000508041.1_1_3:134332031-134343939:-|nuORF;REV__nc|ENSG00000174611|Q8NBH2-3|KY 23.1484247019978 0.5573009939494978 1 {I|L}DS 3 -1 54.693 0.0 0.0 6.0604 0.0 0.0 0.0 584.2973116510374 584.2973116510374 37.47425010840047 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {I|L}DS 6.0604 + + 47 + 1 2.114 62759.2 1.0 2604 3409 6014 DOHH2_400M_050219_1,6015 DOHH2_400M_050219_1,6015,LDSVLEDL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6016 32.859 162.0 435980.0 25 0 72945.0 -1 SVYKMGILS 9 102 507.2708661572859 1012.527179381372 2 507.2705261111259 MULTI CID FTMS 0 0 0 6014 291208.65625 0.2423550570816787 -2 0.1568641662597656 2 Oxidation (M) _SVYKM(Oxidation (M))GILS_ ENST00000304449.5_2_X:118725002-118725137:-|nuORF 9.38312468134398 0.5871240394367778 1 [VS]YMATT{I|L}K 9 -1 + 64.096 0.0 0.0 6.3303 6.3303 92.579 0.0 0.0 0.0 48.89001313058165 9.085842975353629 9.085842975353629 19.42008053022313 0 0.805462187404089 2.0 0.0 0.0 [VS]YMATT{I|L}K;[VS]Y[VG]{M(Oxidation (M))|F}T{I|L}K;[VS]YRSHHK;[VS]YR[WR]{M(Oxidation (M))|F};[VS]Y[RK][TP]Y;[VS]Y[RK][DV]{M(Oxidation (M))|F};[VS]Y[KP][HS][VP] 6.3303;4.4123;3.8959;3.734;3.0526;3.0526;2.7154 -;-;-;-;-;-;- 227 + 1 2.114 61160.4 1.0 2605 3409 6014 DOHH2_400M_050219_1,6016 DOHH2_400M_050219_1,6016,SVYKMGILS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6017 32.871 710.0 247040.0 25 0 16938.0 + -1 YEQSQQEMEC 10 159 666.2485254257371 1330.482497918274 2 666.2490112185478 MULTI CID FTMS 0 0 0 6014 275530.75 1.0 0 0.0 3 Carbamidomethyl (C) _YEQSQQEMEC(Carbamidomethyl (C))_ REV__CON__P08779;REV__CON__Q3ZAW8;REV__CON__Q9Z2K1;REV__ENSG00000186832|ENST00000301653|KRT16 8.745405648335112 0.6861838735306406 1 YK{M(Oxidation (M))|F}DE 5 -1 57.593 0.0 0.0 4.3288 0.0 0.0 0.0 645.1636446588499 645.1636446588499 40.60378004088497 0.0 0.0 0.0 0 0.7887254899964358 0.0 1.524227503252014 0.0 YK{M(Oxidation (M))|F}DE 4.3288 - 293 + 1 2.114 131646.0 1.0 2606 3409 6014 DOHH2_400M_050219_1,6017 DOHH2_400M_050219_1,6017,YEQSQQEMEC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6018 32.877 322.0 159700.0 25 0 17111.0 -1 YESQTSFGSMY 11 85 658.2638497401055 1314.5131465470108 2 658.2632934451103 MULTI CID FTMS 0 0 0 6014 137170.0625 1.0 0 0.0 4 Oxidation (M) _YESQTSFGSM(Oxidation (M))Y_ ENSG00000154832|ENST00000285106|CXXC1;ENST00000586568.1_1_18:47809883-47810144:-|nuORF;ENST00000590901.5_1_18:47808965-47812340:-|nuORF;nc|ENSG00000154832|Q9P0U4-2|CXXC1 5.731851221503515 0.8481046878870278 1 QY 2 -1 20.969 0.0 0.0 1.5952 0.0 0.0 0.0 1020.3365878554664 1020.3365878554664 6.365006360318688 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QY 1.5952 - 64 + 1 2.114 48769.7 1.0 2607 3409 6014 DOHH2_400M_050219_1,6018 DOHH2_400M_050219_1,6018,YESQTSFGSMY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6019 32.884 406.0 271290.0 25 0 16806.0 + 7577 EIKQKFSEL 9 159 561.3124899842833 0 561.3135864138603 PEAK CID FTMS 0 0 0 6014 118789.625 1.0 0 0.0 5 Unmodified _EIKQKFSEL_ ENSG00000174718|ENST00000312561|RESF1 24.99096001346401 0.1558265925128033 1 KQ 2 7 11.766 0.0 0.0 1.05 0.0 0.0 242.12269125108884 619.3104952447874 861.4331864958763 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + KQ 1.05 + + 43 + 1 2.114 86779.6 1.0 2608 3409 6014 DOHH2_400M_050219_1,6019 DOHH2_400M_050219_1,6019,EIKQKFSEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6020 32.898 800.0 158210.0 25 0 11416.0 + 5166 DIKVKFSDA 9 171 511.7800246463489 1021.545496359498 2 511.7808105349541 MULTI CID FTMS 0 0 0 6014 112066.8359375 1.0 0 0.0 6 Unmodified _DIKVKFSDA_ ENSG00000187109|ENST00000618691|NAP1L1;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1 37.07464296494664 0.0915153923251136 1 D{I|L}KVK{M(Oxidation (M))|F}SDA 9 0 + 81.376 0.0 0.0 7.9659 7.9659 94.111 0.0 0.0 0.0 36.47817481888638 10.73588904679204 10.73588904679204 10.73588904679204 0 1.0189301784845295 2.0 0.5941876774005249 0.4247425010840047 + + D{I|L}KVK{M(Oxidation (M))|F}SDA;D{I|L}KVK{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}W;D{I|L}KVK[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L};D{I|L}KVK{[CT]|[{M(Oxidation (M))|F}G]}C{I|L};D{I|L}KVK{[CP]|[EA]}GY;D{I|L}KVK[DG]T{M(Oxidation (M))|F};D{I|L}KVK{[YC]|[HE]}[PG];{NN|[MP]|[D{I|L}]|[EV]}KYGK{I|L}W;{NN|[MP]|[D{I|L}]|[EV]}KYGAD[K{I|L}];{NN|[MP]|[D{I|L}]|[EV]}KYGW[K{I|L}] 7.9659;6.915;6.8538;6.4755;6.4147;6.3596;6.0252;4.3522;3.1223;2.9552 +;-;-;-;-;-;-;-;-;- + 1133 + 1 2.114 99781.8 0.6700000166893005 2609 3409 6014 DOHH2_400M_050219_1,6020 DOHH2_400M_050219_1,6020,DIKVKFSDA True True DIKVKFSDA 32.897913 511.780810534954 521076.0625 6014.0 ENSG00000187109|ENST00000618691|NAP1L1;;nc|ENSG00000187109|P55209-3|NAP1L1;;nc|ENSG00000187109|P55209-2|NAP1L1 5.345967928568522 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6021 32.912 800.0 134210.0 25 0 22979.0 + 7931 ELRIDNNKY 9 108 582.8042593279079 0 582.8050414919853 PEAK CID FTMS 0 0 0 6014 115069.3125 1.0 0 0.0 7 Unmodified _ELRIDNNKY_ REV__ENSG00000021645|ENST00000335750|NRXN3;REV__nc|ENSG00000021645|Q9Y4C0-3|NRXN3;REV__nc|ENSG00000021645|Q9Y4C0-4|NRXN3;REV__nc|ENSG00000021645|Q9Y4C0|NRXN3 20.453626601364224 0.1969592619112565 1 E{I|L} 2 -1 13.711 0.0 0.0 1.1784 0.0 0.0 181.07195644632787 737.3725757940969 918.4445322404248 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 E{I|L} 1.1784 + + 40 + 1 2.114 84013.1 0.7300000190734863 2610 3409 6014 DOHH2_400M_050219_1,6021 DOHH2_400M_050219_1,6021,ELRIDNNKY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6022 32.926 800.0 277950.0 25 0 34048.0 + 20965 LNLDIRER 8 177 514.7955669762762 1027.5765810193525 2 514.7964355349541 MULTI CID FTMS 0 0 0 6014 91435.234375 0.6112828776384425 -1 0.0550117492675781 8 Unmodified _LNLDIRER_ REV__ENST00000311066.9_1_1:14113329-14113425:+|nuORF 25.399314129420983 0.5099049743284904 1 {I|L}NVE 4 -1 40.991 0.0 0.0 3.9891 0.0 0.0 0.0 569.3179159117186 569.3179159117186 14.304213339345663 0.0 0.0 0.0 0 0.5317183090963749 2.0 0.0 0.4247425010840047 {I|L}NVE 3.9891 - 605 + 1 2.114 169383.0 0.6399999856948853 2611 3409 6014 DOHH2_400M_050219_1,6022 DOHH2_400M_050219_1,6022,LNLDIRER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6024 32.93 1.4 26136000.0 25 0 2923700.0 + 18441 KYFDEHYEY 9 65 647.2745931728801 1292.5346334125602 2 647.2761108279228 MULTI CID FTMS 0 0 0 6023 32761652.0 0.518945859315486 1 -0.1014060974121093 1 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 41.95555342248728 0.0647214845423414 1 [YT]R{[{M(Oxidation (M))|F}D]|MM}HYEY 9 3 + 48.043 0.0 0.0 3.7169 3.7169 69.61 0.0 0.0 0.0 0.4130047915638926 0.487388074678833 0.4130047915638926 0.4130047915638926 0 0.8807196863200843 0.0 0.2887254899964357 0.3494850021680094 [YT]R{[{M(Oxidation (M))|F}D]|MM}HYEY;{[YC]|[HE]}D{M(Oxidation (M))|F}YKYEY;{[YC]|[HE]}D{M(Oxidation (M))|F}YYKEY;{[YC]|[HE]}D{M(Oxidation (M))|F}YE[YK]Y;{[YC]|[HE]}D[QT]{[ES]|[DT]|[{I|L}C]}REY;[YT]H[YT][PG]YEY;{[WN]|[YH]}[Y{M(Oxidation (M))|F}]WWEY;{[WN]|[YH]}[Y{M(Oxidation (M))|F}]{[ES]|[DT]|[{I|L}C]}REY;{[WN]|[YH]}T[YT][PG]YEY 3.7169;3.685;3.4521;2.2343;1.7755;1.5736;1.371;1.3314;1.0424 -;-;-;-;-;-;-;-;- 166 1 2.1 35204.4 1.0 2612 3410 6023 DOHH2_400M_050219_1,6024 DOHH2_400M_050219_1,6024,KYFDEHYEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6025 32.935 253.0 227790.0 25 0 12398.0 + + 6253 TEIDARAGTF 10 95 539.7629806260917 1077.5114083189833 2 541.2680541872978 MULTI CID FTMS 0 0 0 6023 122312.1953125 0.8768677172078885 -2 0.1322212219238281 2 Unmodified _DTNLPAVWY_ nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1 11.640296217721598 0.521594087909532 1 EPET 4 -1 26.473 0.0 0.0 2.4568 0.0 0.0 0.0 618.3004409014154 618.3004409014154 7.889279768897563 0.0 0.0 0.0 0 0.0 0.6575773191777937 0.0 0.0 EPET 2.4568 - 74 + 1 2.1 51993.9 1.0 2613 3410 6023 DOHH2_400M_050219_1,6025 DOHH2_400M_050219_1,6025,DTNLPAVWY False False TEIDARAGTF 32.93474 540.767 7158508.5 6023.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 3.29565437634786 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6026 32.94 283.0 298990.0 25 0 47405.0 + 45131 YQDPDATSLKY 11 101 650.805855983401 1299.597159033602 2 650.8060790896416 MULTI CID FTMS 0 0 0 6023 303587.09375 1.0 0 0.0 3 Unmodified _YQDPDATSLKY_ ENSG00000131778|ENST00000369258|CHD1L;nc|ENSG00000131778|Q86WJ1-2|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L;nc|ENSG00000131778|Q86WJ1-5|CHD1L 49.74193281347159 0.1190592179673825 1 [YQ]DPDATS{I|L}KY 11 0 + 70.002 0.0 0.0 5.3864 5.3864 82.507 0.0 0.0 0.0 43.42410434930291 15.294370317596638 15.294370317596638 6.575773191777941 0 1.0 1.0 0.3807196863200844 0.4247425010840047 + + [YQ]DPDATS{I|L}KY;[YQ]DPWTS{I|L}KY;[YQ]DPD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}KY;[YQ]D[{I|L}V]D{I|L}S{[QG]|[NA]}Y;[K{I|L}][HM]TADPD{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]D[{I|L}V]D{I|L}S[YG]Q;[DP]A{I|L}{I|L}TADPD{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]D[{I|L}V]{I|L}DS{[QG]|[NA]}Y;[YQ]D[{I|L}V]{I|L}SD{[QG]|[NA]}Y;[DP]AT{I|L}{I|L}ADPD{[WS]|[C(Carbamidomethyl (C)){I|L}]} 5.3864;4.8804;4.1325;3.5328;3.2514;3.1418;3.1271;3.0901;3.0455;3.0289 +;-;-;-;-;-;-;-;-;- + 578 + 1 2.1 66839.8 1.0 2614 3410 6023 DOHH2_400M_050219_1,6026 DOHH2_400M_050219_1,6026,YQDPDATSLKY True True YQDPDATSLKY 32.939952 650.806079089642 1532067.625 6023.0 nc|ENSG00000131778|Q86WJ1-3|CHD1L;;nc|ENSG00000131778|Q86WJ1-5|CHD1L;;nc|ENSG00000131778|Q86WJ1-2|CHD1L;;nc|ENSG00000131778|Q86WJ1-4|CHD1L;;ENSG00000131778|ENST00000369258|CHD1L 8.944756507873535 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6027 32.954 800.0 187010.0 25 0 14143.0 + 6166 DTDAQQAFKY 10 160 593.7717700322023 1185.5289871312043 2 593.7722656130791 MULTI CID FTMS 0 0 0 6023 189854.59375 0.4496851088712438 -1 0.07720947265625 4 Unmodified _DTDAQQAFKY_ ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-5|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4 140.63315402491853 0.0001363061203217 1 {[ES]|[DT]|[{I|L}C]}DAQQA{M(Oxidation (M))|F}KY 10 0 + 92.402 0.0 0.0 7.7942 7.7942 88.775 0.0 0.0 0.0 7.269987279362624 6.28388930050312 6.28388930050312 6.28388930050312 0 2.254432191740108 0.0 0.0 1.4731975075880328 + + {[ES]|[DT]|[{I|L}C]}DAQQA{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}DAQQA{M(Oxidation (M))|F}YK;{[ES]|[DT]|[{I|L}C]}DA[AG]QA{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}DAQ[AG]A{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}WQQA{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}DAQ[AG]A{M(Oxidation (M))|F}YK;{[ES]|[DT]|[{I|L}C]}DA[AG]QA{M(Oxidation (M))|F}YK;{[ES]|[DT]|[{I|L}C]}WQQA{M(Oxidation (M))|F}YK;{[ES]|[DT]|[{I|L}C]}DA[AG][AG]A{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}WQ[AG]A{M(Oxidation (M))|F}KY 7.7942;7.2641;7.0211;7.0211;6.8849;6.4911;6.4911;6.3549;6.2511;6.1082 +;-;-;-;-;-;-;-;-;- + 2026 + 1 2.1 112366.2 0.9399999976158142 2615 3410 6023 DOHH2_400M_050219_1,6027 DOHH2_400M_050219_1,6027,DTDAQQAFKY True True DTDAQQAFKY 32.953783 593.772265613079 2809622.5 6023.0 nc|ENSG00000161813|Q71RC2-4|LARP4;;nc|ENSG00000161813|Q71RC2-3|LARP4;;nc|ENSG00000161813|Q71RC2-2|LARP4;;nc|ENSG00000161813|Q71RC2-5|LARP4;;nc|ENSG00000161813|Q71RC2-7|LARP4;;nc|ENSG00000161813|Q71RC2-6|LARP4;;ENSG00000161813|ENST00000398473|LARP4 9.395272254943848 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6028 32.962 482.0 269940.0 25 0 31349.0 + 39236 VAAAHSVVL 9 137 433.7581253984167 865.5016978636334 2 433.7581054568291 MULTI CID FTMS 0 0 0 6023 180956.796875 1.0 0 0.0 5 Unmodified _VAAAHSVVL_ ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;nc|ENSG00000131558|Q96A65-2|EXOC4 46.92087301778293 0.0471210510596396 1 [HA]ASVAVV{I|L} 9 4 + 30.332 0.0 0.0 3.5046 3.5046 74.856 0.0 0.0 0.0 0.501444527144276 16.352832243275945 0.501444527144276 4.955678082598922 0 0.6237125054200234 0.0 1.3494850021680094 0.0 [HA]ASVAVV{I|L};[HA]ASVVAV{I|L};[HA]ASAVVV{I|L};[HA]AAVSVV{I|L};[HS]AAVAVV{I|L};[HA]AASVVV{I|L};[HS]VNVVV{I|L};[HS][Q{I|L}]AVV{I|L};[HS]VAAAVV{I|L};[HS]AAVVAV{I|L} 3.5046;2.932;2.5062;2.3852;2.3816;2.1584;1.9936;1.9809;1.9218;1.809 -;-;-;-;-;-;-;-;-;- 297 1 2.1 105557.7 1.0 2616 3410 6023 DOHH2_400M_050219_1,6028 DOHH2_400M_050219_1,6028,VAAAHSVVL True True VAAAHSVVL 32.962302 433.7587 1177739.625 6023.0 ENSG00000131558|ENST00000253861|EXOC4;;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;;nc|ENSG00000131558|Q96A65-2|EXOC4;;ENST00000462055.5_1_7:132937857-133164897:+|nuORF 3.9591428438822422 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6029 32.976 800.0 270690.0 25 0 14460.0 + 13866 HVITKTMEL 9 194 536.2958446327494 1070.5771363322988 2 536.2962524294853 MULTI CID FTMS 0 0 0 6023 145803.375 0.9987437859574814 -1 0.07720947265625 6 Unmodified _HVITKTMEL_ ENSG00000153201|ENST00000283195|RANBP2 70.33199760932243 0.0209706178985989 1 HV{I|L}{M(Oxidation (M))|F}G{[RE]|[WV]}T{I|L} 9 5 + 63.753 0.0 0.0 5.955 5.955 84.409 0.0 0.0 0.0 33.874974901277405 1.0617234680295482 1.0617234680295482 6.478174818886373 0 0.8807196863200843 2.0 1.2521934810768762 0.0 HV{I|L}{M(Oxidation (M))|F}G{[RE]|[WV]}T{I|L};HV{I|L}{M(Oxidation (M))|F}[WR]T{I|L};HV{I|L}T{[MG]|[TS]}{[TV]|[{I|L}S]}T{I|L};[HV]{I|L}[QP]EVH{I|L};HV{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}KVP;[HV]{I|L}T[WR]{M(Oxidation (M))|F}{I|L};{I|L}VH{M(Oxidation (M))|F}G{[RE]|[WV]}T{I|L};HV{I|L}{M(Oxidation (M))|F}AA{[TV]|[{I|L}S]}T{I|L};[HV]{I|L}TKQQ{[MS]|[{M(Oxidation (M))|F}A]};[HV]{I|L}TK[DP]VY 5.955;5.3499;5.3173;4.8724;4.7977;4.6772;4.4806;4.442;4.1771;4.1385 -;-;-;-;-;-;-;-;-;- 1823 + 1 2.1 168038.8 0.8299999833106995 2617 3410 6023 DOHH2_400M_050219_1,6029 DOHH2_400M_050219_1,6029,HVITKTMEL True True HVITKTMEL 32.976134 536.2976 1080869.125 6023.0 ENSG00000153201|ENST00000283195|RANBP2 5.509205182393392 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6030 32.99 800.0 223730.0 25 0 17093.0 + 4710 DEAGGYVKVY 10 180 550.766055003337 1099.517557073474 2 550.7640258669853 MULTI CID FTMS 0 0 0 6023 157902.03125 0.9422882009423134 -1 0.07720947265625 7 Unmodified _DEAGGYVKVY_ ENSG00000185482|ENST00000332782|STAC3;nc|ENSG00000185482|Q96MF2-2|STAC3;nc|ENSG00000185482|Q96MF2-3|STAC3 72.96794272382148 0.0188410189619069 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AG[YG]VKVY 10 0 + 56.022 0.0 0.0 5.0952 5.0952 79.451 0.0 0.0 0.0 27.04808007854726 14.146518864155126 14.146518864155126 4.3753063169585005 0 2.3169015600442577 0.0 0.0 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AG[YG]VKVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A[YN]VKVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AG[YR]KVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[YG]VKVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[YR]KVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AG[YK][RV]Y;[YV]NKV[WE]Y;[YN]VKV[WE]Y;[YG]GVKV[WE]Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AG[KG][YV]VY 5.0952;4.6972;4.1832;4.1548;3.2478;2.664;2.474;2.4468;2.4003;2.3422 +;-;-;-;-;-;-;-;-;- + 2234 + 1 2.1 136830.8 0.8299999833106995 2618 3410 6023 DOHH2_400M_050219_1,6030 DOHH2_400M_050219_1,6030,DEAGGYVKVY True True DEAGGYVKVY 32.989965 550.764025866985 1159990.375 6023.0 nc|ENSG00000185482|Q96MF2-2|STAC3;;ENSG00000185482|ENST00000332782|STAC3;;nc|ENSG00000185482|Q96MF2-3|STAC3 6.554168701171875 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6031 33.004 800.0 168150.0 25 0 17335.0 + 342 AEAPGEQLY 9 154 489.2334632132209 976.4523734932418 2 489.2342407107353 MULTI CID FTMS 0 0 0 6023 107196.53125 1.0 0 0.0 8 Unmodified _AEAPGEQLY_ ENSG00000119559|ENST00000585675|C19orf25;ENST00000592486.1_1_19:1475033-1475351:-|nuORF;nc|nan|Q9UFG5-2|C19orf25 24.020572477871973 0.2255576514309169 1 [{I|L}P]YDHG{I|L}Y 8 7 + 25.716 0.0 0.0 2.6336 2.6336 69.906 0.0 0.0 0.0 2.572070048805056 3.9496310150683023 2.572070048805056 2.572070048805056 0 0.6822333069283655 0.6989700043360187 0.0 0.0 [{I|L}P]YDHG{I|L}Y;{[DA]|[EG]}PQ[DV]G{I|L}Y;[PG]EQ[DV]G{I|L}Y;{[DA]|[EG]}PQ[RD]{I|L}Y;[{I|L}P]YDHV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[CP]|[EA]}NP[DV]G{I|L}Y;{[DA]|[EG]}PQAEA{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}DHG{I|L}Y;[PG]EQ[RD]{I|L}Y;[TA]Q{[MG]|[TS]}HG{I|L}Y 2.6336;2.3702;2.0464;2.015;1.8042;1.7354;1.7319;1.7167;1.6912;1.6728 -;-;-;-;-;-;-;-;-;- 717 1 2.1 108373.4 0.6600000262260437 2619 3410 6023 DOHH2_400M_050219_1,6031 DOHH2_400M_050219_1,6031,AEAPGEQLY False True AEAPGEQLY 33.003779 489.234240710735 536450.1875 6023.0 ENSG00000119559|ENST00000585675|C19orf25;;ENST00000592486.1_1_19:1475033-1475351:-|nuORF;;nc|nan|Q9UFG5-2|C19orf25 4.041181723276774 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6032 33.014 506.0 173350.0 25 0 15469.0 + 2269 AQGGQEAYF 9 123 485.7169853484901 969.4194177637802 2 485.7165710330009 MULTI CID FTMS 0 0 0 6023 84538.890625 0.7614745854085804 -1 0.07720947265625 9 Unmodified _AQGGQEAYF_ REV__ENSG00000124608|ENST00000244571|AARS2 46.020951573049366 0.0490941689151868 1 R{M(Oxidation (M))|F}Y 3 -1 26.555 0.0 0.0 2.7392 0.0 0.0 485.1860020917083 0.0 485.1860020917083 0.0 8.023787536356576 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 R{M(Oxidation (M))|F}Y 2.7392 - 340 + 1 2.1 70499.4 1.0 2620 3410 6023 DOHH2_400M_050219_1,6032 DOHH2_400M_050219_1,6032,AQGGQEAYF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6033 33.017 149.0 268150.0 25 0 25021.0 + -1 VQMHKMKQCLQ 11 70 695.3466933341681 1388.678833735136 2 695.3484985232353 MULTI CID FTMS 0 0 0 6023 144595.40625 1.0 0 0.0 10 Oxidation (M) _VQM(Oxidation (M))HKMKQCLQ_ REV__ENSG00000106546|ENST00000242057|AHR 17.11289562659939 0.6791789249425932 1 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}AD{[C(Carbamidomethyl (C))E]|[WC]}[WK]{I|L}Q 11 -1 + 50.494 0.0 0.0 3.6361 3.6361 72.467 0.0 0.0 0.0 25.71774810055185 5.355994895545244 5.355994895545244 2.7815125038364386 0 0.4247425010840047 2.0 0.0 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}AD{[C(Carbamidomethyl (C))E]|[WC]}[WK]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NAN{[C(Carbamidomethyl (C))E]|[WC]}[WK]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}W{[C(Carbamidomethyl (C))E]|[WC]}[WK]{I|L}Q;[KA][YC(Carbamidomethyl (C))][{I|L}V]QNA[WH] 3.6361;3.4358;3.1626;1.3109 -;-;-;- 170 + 1 2.1 36413.3 1.0 2621 3410 6023 DOHH2_400M_050219_1,6033 DOHH2_400M_050219_1,6033,VQMHKMKQCLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6034 33.027 543.0 154630.0 25 0 40290.0 + 43367 WPWLGAPL 8 116 470.2574714841707 0 470.2575256228447 PEAK CID FTMS 0 0 0 6023 105125.8984375 0.352833890601242 41 -3.9894752502441406 11 Unmodified _WPWLGAPL_ REV__ENST00000454036.6_2_20:44673649-44676200:+|nuORF 6.354104778181461 0.5763711549229614 1 R 1 -1 5.401 0.0 0.0 0.57549 0.0 0.0 469.2161320779133 310.15534387760005 779.3714759555133 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 R 0.57549 - 12 + 1 2.1 67695.5 1.0 2622 3410 6023 DOHH2_400M_050219_1,6034 DOHH2_400M_050219_1,6034,WPWLGAPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6036 33.031 9.2 3918900.0 25 0 944740.0 + 18445 KYFDEHYEY 9 60 431.8524612424013 1292.535554327404 3 431.8528015017509 MULTI CID FTMS 0 0 0 6035 3600615.5 0.1294214212341803 2 -0.1212005615234375 1 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 13.042465956692816 0.4836390050082244 1 Y 1 8 15.485 0.0 0.0 1.198 0.0 0.0 1111.4611504961524 0.0 1111.4611504961524 0.0 -9.035984316004216 -9.035984316004216 0.0 0 0.0 0.0 0.0 0.0 + Y 1.198 + + 67 + 1 2.105 37624.5 1.0 2623 3411 6035 DOHH2_400M_050219_1,6036 DOHH2_400M_050219_1,6036,KYFDEHYEY False True KYFDEHYEY 33.031433 431.852801501751 1393262688.0 6035.0 ENSG00000123975|ENST00000314355|CKS2 8.971857388814291 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6037 33.033 13.0 3962500.0 25 0 500720.0 + 35212 SSDPASQLSY 10 91 527.7379976938034 1053.4614424544068 2 527.7381469607353 MULTI CID FTMS 0 0 0 6035 4443311.0 0.784708076090693 -2 0.1786155700683593 2 Unmodified _SSDPASQLSY_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000536066.1_1_12:2967806-2973707:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 70.33199760932243 0.018925923965799 1 [PA]SQ{I|L}SDSSY 10 6 + 65.43 0.0 0.0 6.211 6.211 83.149 0.0 0.0 0.0 3.911740801802624 15.560257724583096 3.911740801802624 3.911740801802624 0 0.5 0.6575773191777937 1.4291746928241125 0.0 [PA]SQ{I|L}SDSSY;[AG]SAP{I|L}SDSSY;[PA]SDSSQ{I|L}SY;{[TV]|[{I|L}S]}QAPSDSSY;{[QS]|[NT]}AP{I|L}SDSSY;{[QS]|[NT]}{I|L}APSDSSY;[AG]S{I|L}APSDSSY;{[CA]|SS}D[PA]SQ{I|L}SY;{[C(Carbamidomethyl (C))E]|[WC]}[PA]SQ{I|L}SY;[PA]S[AG]{I|L}SDSSY 6.211;5.8397;5.7527;5.6828;5.6472;5.5829;5.5013;5.4718;5.4002;5.341 -;-;-;-;-;-;-;+;-;- + 617 1 2.105 44791.3 1.0 2624 3411 6035 DOHH2_400M_050219_1,6037 DOHH2_400M_050219_1,6037,SSDPASQLSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6038 33.034 32.0 2053700.0 25 0 182760.0 + 29062 QEIYGGSDSRF 11 68 629.7894385054383 1257.5643240776765 2 629.7892333865166 MULTI CID FTMS 0 0 0 6035 1736035.0 1.0 0 0.0 3 Unmodified _QEIYGGSDSRF_ ENSG00000115524|ENST00000335508|SF3B1;nc|ENSG00000115524|O75533-2|SF3B1 48.07275321834293 0.1283031204265279 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YGGSD{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]} 11 2 + 53.932 0.0 0.0 4.2886 4.2886 78.574 0.0 0.0 0.0 45.34881702974726 6.971679422016059 6.971679422016059 6.575773191777934 0 0.9247425010840048 0.0 0.0 0.3494850021680094 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YGGSD{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YNSD{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YGGS[R{M(Oxidation (M))|F}]{[DS]|[MA]|[CV]|TT};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}WGSD{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YGG[WY]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}D{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YNS[R{M(Oxidation (M))|F}]{[DS]|[MA]|[CV]|TT};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YN[WY]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}D{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}WGS[R{M(Oxidation (M))|F}]{[DS]|[MA]|[CV]|TT} 4.2886;3.7657;2.8277;2.7707;2.7535;2.3741;2.3048;2.234;1.379;1.3097 -;-;-;-;-;-;-;-;-;- 264 + 1 2.105 54066.0 1.0 2625 3411 6035 DOHH2_400M_050219_1,6038 DOHH2_400M_050219_1,6038,QEIYGGSDSRF False True QEIYGGSDSRF 33.033789 629.789233386517 10105539.0 6035.0 ENSG00000115524|ENST00000335508|SF3B1;;nc|ENSG00000115524|O75533-2|SF3B1 7.395430723826091 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6039 33.036 80.0 464040.0 25 0 60645.0 + 40396 VIDQQNGLY 9 66 525.2665423246633 1048.5185317161263 2 525.2670776247978 MULTI CID FTMS 0 0 0 6035 552963.6875 0.4107039504627314 1 -0.0937042236328125 4 Unmodified _VIDQQNGLY_ ENSG00000132383|ENST00000254719|RPA1 21.74664581756881 0.2544899275067181 1 {I|L}Y 2 7 24.464 0.0 0.0 2.3332 0.0 0.0 754.3605249796016 0.0 754.3605249796016 0.0 12.412581433031846 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}Y 2.3332 + + 30 + 1 2.105 33908.6 1.0 2626 3411 6035 DOHH2_400M_050219_1,6039 DOHH2_400M_050219_1,6039,VIDQQNGLY False True VIDQQNGLY 33.035618 525.267077624798 7886007.5 6035.0 ENSG00000132383|ENST00000254719|RPA1 3.772447109222412 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6040 33.038 90.0 541240.0 25 0 39754.0 + 33119 SETDMVRQI 9 78 539.7629806260917 1077.5114083189833 2 539.7635375857353 MULTI CID FTMS 0 0 0 6035 366609.25 0.2210031154263034 -3 0.2336273193359375 5 Unmodified _SETDMVRQI_ ENSG00000149823|ENST00000279281|VPS51 56.17704186161178 0.0281986971544335 1 ESTDMV 6 5 73.136 0.0 0.0 6.7875 0.0 0.0 0.0 412.2317904108032 412.2317904108032 58.53199407328319 0.0 0.0 0.0 0 1.1989700043360187 2.0 0.0 0.0 ESTDMV 6.7875 - 69 + 1 2.105 42462.0 1.0 2627 3411 6035 DOHH2_400M_050219_1,6040 DOHH2_400M_050219_1,6040,SETDMVRQI True True SETDMVRQI 33.037614 539.763537585735 16915334.0 6035.0 ENSG00000149823|ENST00000279281|VPS51 4.762818018595378 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6041 33.042 252.0 309480.0 25 0 39579.0 + 14220 IDNKALRL 8 99 471.7903028904507 941.5660528477014 2 471.7903320193291 MULTI CID FTMS 0 0 0 6035 202248.140625 1.0 0 0.0 6 Unmodified _IDNKALRL_ REV__ENSG00000162402|ENST00000294383|USP24 28.486842064014134 0.4448922141344407 1 D{I|L}K 3 -1 52.435 0.0 0.0 5.5689 0.0 0.0 0.0 582.3345331007702 582.3345331007702 38.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3494850021680094 D{I|L}K 5.5689 - 38 + 1 2.105 65511.1 1.0 2628 3411 6035 DOHH2_400M_050219_1,6041 DOHH2_400M_050219_1,6041,IDNKALRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6042 33.047 260.0 250190.0 25 0 27651.0 + 2623 ASSPHGLVM 9 129 449.72641950205065 0 449.7264892458916 PEAK CID FTMS 0 0 0 6035 192283.59375 0.8312378707519895 -1 0.1014060974121093 7 Unmodified _ASSPHGLVM_ ENSG00000179021|ENST00000318887|C3orf38;nc|nan|Q5JPI3-2|C3orf38 36.04419817259434 0.0811646137502998 1 V{I|L}S 3 8 24.715 0.0 0.0 2.7539 0.0 0.0 149.0496885140638 446.1705416315063 595.2202301455701 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 V{I|L}S 2.7539 - 219 + 1 2.105 54955.1 1.0 2629 3411 6035 DOHH2_400M_050219_1,6042 DOHH2_400M_050219_1,6042,ASSPHGLVM True True ASSPHGLVM 33.047104 449.726489245892 1431457.125 6035.0 ENSG00000179021|ENST00000318887|C3orf38;;nc|nan|Q5JPI3-2|C3orf38 -0.0653317372004191 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6043 33.051 215.0 311810.0 25 0 27431.0 38678 TTLKEKLHKS 10 112 395.5724561551402 1183.6955390656206 3 395.5728942751884 MULTI CID FTMS 0 0 0 6035 156864.09375 0.9387364551669816 -1 0.1014060974121093 8 Unmodified _TTLKEKLHKS_ ENSG00000197980|ENST00000356539|LEKR1 17.04857598603903 0.5614834650426465 1 TT{I|L}KY[R{M(Oxidation (M))|F}]KK 9 5 + 66.357 0.0 0.0 5.6059 5.6059 89.878 0.0 0.0 0.0 51.13006764435757 1.091768580841503 1.091768580841503 18.68836325341209 0 0.3054621874040891 1.3010299956639813 0.0 0.3807196863200844 TT{I|L}KY[R{M(Oxidation (M))|F}]KK;TT{I|L}KY{I|L}[H{I|L}][VP];[VG][YK][RH]K{I|L}[PS];KK[HA]{I|L}YK{I|L}[PS] 5.6059;4.0271;2.721;2.3805 -;-;-;- 115 + 1 2.105 56920.0 1.0 2630 3411 6035 DOHH2_400M_050219_1,6043 DOHH2_400M_050219_1,6043,TTLKEKLHKS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6044 33.055 206.0 140930.0 25 0 9314.1 + 45365 YSSPYPQEY 9 59 567.2428571811719 1132.4711614291436 2 567.2415649294853 MULTI CID FTMS 0 0 0 6035 145694.765625 0.1965128381985046 2 -0.1212005615234375 9 Unmodified _YSSPYPQEY_ ENSG00000083168|ENST00000265713|KAT6A;ENSG00000156650|ENST00000287239|KAT6B;ENST00000490365.1_1_10:76737066-76741701:+|nuORF;nc|ENSG00000156650|Q8WYB5-2|KAT6B;nc|ENSG00000156650|Q8WYB5-3|KAT6B 16.942295170755138 0.3780752226737986 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q 3 6 19.922 0.0 0.0 1.7591 0.0 0.0 0.0 741.2740233278342 741.2740233278342 4.436974992327126 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q 1.7591 + + 67 1 2.105 32899.7 1.0 2631 3411 6035 DOHH2_400M_050219_1,6044 DOHH2_400M_050219_1,6044,YSSPYPQEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6045 33.06 291.0 328550.0 25 0 18563.0 + 38181 TPRHIIVRF 9 129 380.23284930538784 1137.6767185163635 3 380.2330810427666 MULTI CID FTMS 0 0 0 6035 140292.640625 0.9766758970890396 -1 0.1014060974121093 10 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 18.721224879955976 0.3299216912490967 1 T[RP]H{I|L}{I|L}RV{M(Oxidation (M))|F} 9 2 + 45.153 0.0 0.0 3.9689 3.9689 70.306 0.0 0.0 0.0 14.078187723065328 0.3778856088939974 0.3778856088939974 0.3778856088939974 0 1.1164934734859662 0.0 0.0 0.0 T[RP]H{I|L}{I|L}RV{M(Oxidation (M))|F};T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}VR 3.9689;3.9357 -;- 131 + 1 2.105 82202.5 1.0 2632 3411 6035 DOHH2_400M_050219_1,6045 DOHH2_400M_050219_1,6045,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6046 33.074 800.0 124360.0 25 0 8288.3 -1 MDNITRQNQFY 11 76 744.3310410826772 1486.6475292321545 2 744.3313476443291 MULTI CID FTMS 0 0 0 6035 129328.625 0.1913988726911285 2 -0.1212005615234375 11 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 1 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 71.847 0.0 0.0 4.8328 4.8328 76.89 0.0 0.0 0.0 5.031478900382041 56.36233223546921 5.031478900382041 3.0102999566398125 0 0.8182503180159344 0.744727494896694 0.0 1.274227503252014 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQGGA{M(Oxidation (M))|F}Y 4.8328;4.6303;4.2901;4.2225;4.2225;4.2225;4.0876;4.0619;4.0201;4.0201 -;-;-;-;-;-;-;-;-;- 1389 1 2.105 77487.5 0.6399999856948853 2633 3411 6035 DOHH2_400M_050219_1,6046 DOHH2_400M_050219_1,6046,MDNITRQNQFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6047 33.088 800.0 358440.0 25 0 26285.0 35210 SSDPASDAMDP 11 179 546.7110513517875 1091.407549770375 2 546.7117187380791 MULTI CID FTMS 0 0 0 6035 129248.609375 0.8200406733447035 -4 0.335479736328125 12 Unmodified _SSDPASDAMDP_ ENSG00000163376|ENST00000417314|KBTBD8;ENST00000469661.1_1_3:67048755-67053962:+|nuORF 24.99096001346401 0.505407273373304 1 SSDY[QA][DG]SY 10 6 + 59.203 0.0 0.0 5.4245 5.4245 87.416 0.0 0.0 0.0 34.02610771789645 14.146518864155126 14.146518864155126 10.95098040014257 0 1.3556270500406935 1.0 1.075257498915995 0.0 SSDY[QA][DG]SY;SSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[DG]SY;SSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SY;YSG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S[DG]SY;YY[HT]S[DG]SY;SYG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S[DG]SY;SS[MN][PA]YC(Carbamidomethyl (C))Y;YSG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SY;YSGY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QC]|[C(Carbamidomethyl (C))A]}Q;SYG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SY 5.4245;4.4211;3.8226;2.7221;2.5326;2.4334;2.2269;2.1236;1.8402;1.8349 -;-;-;-;-;-;-;-;-;- 985 + 1 2.105 214866.9 0.6200000047683716 2634 3411 6035 DOHH2_400M_050219_1,6047 DOHH2_400M_050219_1,6047,SSDPASDAMDP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6048 33.102 800.0 73242.0 25 0 10921.0 + -1 YSQSQGDSEYYDY 13 94 802.8045884146295 1603.594623896059 2 802.8043090701103 MULTI CID FTMS 0 0 0 6035 91146.3984375 1.0 0 0.0 13 4 Carbamidomethyl (C) _FC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))ILFYFD_ nc|ENSG00000121774|Q07666-3|KHDRBS1;ENST00000307714.12_1_1:32503693-32508222:+|nuORF;ENSG00000121774|ENST00000327300|KHDRBS1;nc|ENSG00000121774|Q07666-2|KHDRBS1 0.0 0.8751479354844584 1 {[YD]|[{M(Oxidation (M))|F}M]}YG[HM]{[QS]|[NT]}YYDY 12 -1 {[YD]|[{M(Oxidation (M))|F}M]}YG[HM]{[QS]|[NT]}Y + + 35.93 29.587 2.5853 2.2406 2.2406 49.123 0.0 0.0 0.0 0.0 14.841284356197235 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 {[YD]|[{M(Oxidation (M))|F}M]}YG[HM]{[QS]|[NT]}YYDY 2.2406 - 415 + 1 2.105 46406.1 0.5400000214576721 2635 3411 6035 DOHH2_400M_050219_1,6048 DOHH2_400M_050219_1,6048,FCCCCILFYFD False False YSQSQGDSEYYDY 33.101947 802.80430907011 719364.75 6035.0 nc|ENSG00000121774|Q07666-3|KHDRBS1;;ENST00000307714.12_1_1:32503693-32508222:+|nuORF;;ENSG00000121774|ENST00000327300|KHDRBS1;;nc|ENSG00000121774|Q07666-2|KHDRBS1 6.9033738772074384 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6049 33.109 292.0 323650.0 25 0 70995.0 + 6826 EEARRLLGY 9 92 553.801919627054 1105.5892863209078 2 553.8016235232353 MULTI CID FTMS 0 0 0 6035 88096.765625 0.4074688551384342 -1 0.1014060974121093 14 Unmodified _EEARRLLGY_ ENSG00000240682|ENST00000393295|ISY1;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;nc|ENSG00000240682|Q9ULR0-2|ISY1 28.486842064014134 0.1687311288560894 1 EE 2 7 33.232 0.0 0.0 3.0058 0.0 0.0 0.0 844.4803738306939 844.4803738306939 15.273109370204452 0.0 0.0 0.0 0 0.3054621874040891 1.2218487496163564 0.0 0.0 + EE 3.0058 + + 65 + 1 2.105 76930.6 1.0 2636 3411 6035 DOHH2_400M_050219_1,6049 DOHH2_400M_050219_1,6049,EEARRLLGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6050 33.112 154.0 603640.0 25 0 91692.0 7909 ELQFNSCSL 9 113 520.7377306884875 0 520.7375366091728 PEAK CID FTMS 0 0 0 6035 144014.484375 1.0 0 0.0 15 Unmodified _ELQFNSCSL_ nc|ENSG00000109685|O96028-2|NSD2 13.90604991867851 0.2674652324371145 1 SM 2 8 9.464 0.0 0.0 0.91047 0.0 0.0 180.0407162707558 638.3281954400999 818.3689117108556 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SM 0.91047 - 35 + 1 2.105 72356.8 1.0 2637 3411 6035 DOHH2_400M_050219_1,6050 DOHH2_400M_050219_1,6050,ELQFNSCSL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6051 33.12 480.0 264490.0 25 0 13844.0 + 13101 HEPKLKVDL 9 172 360.21344598638984 1077.6185085593695 3 360.2133056521416 MULTI CID FTMS 0 0 0 6035 146632.453125 1.0 0 0.0 16 Unmodified _HEPKLKVDL_ ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C 21.74664581756881 0.2544899275067181 1 {I|L} 1 8 12.764 0.0 0.0 1.1845 0.0 0.0 946.5236426919852 0.0 946.5236426919852 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1845 + + 56 + 1 2.105 104160.8 1.0 2638 3411 6035 DOHH2_400M_050219_1,6051 DOHH2_400M_050219_1,6051,HEPKLKVDL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6053 33.125 75.0 628860.0 25 0 137290.0 -1 SVYKMGILS 9 68 507.2708661572859 1012.527179381372 2 507.2708923220634 MULTI CID FTMS 0 0 0 6052 494396.4375 0.4114557526354133 1 -0.027496337890625 1 Oxidation (M) _SVYKM(Oxidation (M))GILS_ ENST00000304449.5_2_X:118725002-118725137:-|nuORF 9.38312468134398 0.5871240394367778 1 [VS]YMATT{I|L}K 9 -1 + 70.556 0.0 0.0 6.9683 6.9683 94.762 0.0 0.0 0.0 47.96388461952553 10.335230341436628 10.335230341436628 23.521825181113627 0 0.8494850021680094 2.0 0.0 0.0 [VS]YMATT{I|L}K;[VS]Y[VG]{M(Oxidation (M))|F}T{I|L}K 6.9683;4.6453 -;- 67 + 1 2.105 43601.6 1.0 2639 3412 6052 DOHH2_400M_050219_1,6053 DOHH2_400M_050219_1,6053,SVYKMGILS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6054 33.131 345.0 492640.0 25 0 62221.0 + 43765 YEHYANSTQ 9 144 556.7379595131977 1111.4613660931952 2 556.7381469607353 MULTI CID FTMS 0 0 0 6052 81017.28125 0.0512037989222793 3 -0.0859031677246093 2 Unmodified _YEHYANSTQ_ ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3;nc|ENSG00000070915|P55017-3|SLC12A3 37.97399986684836 0.0865783450051559 1 {[YC]|[HE]}YD{M(Oxidation (M))|F}K 6 6 47.986 0.0 0.0 4.3174 0.0 0.0 0.0 289.0831726275863 289.0831726275863 13.571231544599485 0.0 0.0 0.0 0 0.805462187404089 1.0969100130080565 1.2856668758921828 0.3252574989159953 {[YC]|[HE]}YD{M(Oxidation (M))|F}K 4.3174 - 1235 1 2.105 128871.3 1.0 2640 3412 6052 DOHH2_400M_050219_1,6054 DOHH2_400M_050219_1,6054,YEHYANSTQ True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6055 33.133 62.0 1321400.0 25 0 348110.0 + 6616 EARPRPLSL 9 71 519.8065404255716 1037.598527917943 2 519.8066894412041 MULTI CID FTMS 0 0 0 6052 742987.3125 0.3673048883467383 -4 0.32733154296875 3 Unmodified _EARPRPLSL_ ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1 17.11289562659939 0.3734572693229295 1 {I|L} 1 8 12.764 0.0 0.0 1.2302 0.0 0.0 906.5036010154024 0.0 906.5036010154024 0.0 12.764209843288905 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2302 + + 23 + 1 2.105 68528.8 1.0 2641 3412 6052 DOHH2_400M_050219_1,6055 DOHH2_400M_050219_1,6055,EARPRPLSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6056 33.137 203.0 394260.0 25 0 53287.0 + 45579 YVEINGEKY 9 95 557.7743314682459 1113.5341100032915 2 557.7747070193291 MULTI CID FTMS 0 0 0 6052 241438.96875 0.7541322310016154 -1 0.0937042236328125 4 Unmodified _YVEINGEKY_ ENSG00000149418|ENST00000278742|ST14;ENST00000524718.5_1_11:130059967-130066600:+|nuORF 43.77239144664712 0.0547478964384323 1 YVE{I|L}N{[DA]|[EG]}KY 9 0 + 86.393 0.0 0.0 7.7584 7.7584 92.295 0.0 0.0 0.0 73.81228130928562 14.09256854528806 14.09256854528806 9.208187539523747 0 0.9247425010840048 2.0 0.4247425010840047 0.3054621874040891 + + YVE{I|L}N{[DA]|[EG]}KY;YVE{I|L}GG{[DA]|[EG]}KY;YVE{I|L}N[WH][PG];YVE{I|L}[QA][QT]Y;YVE{I|L}GG[WH][PG];[RH][NP]N{[DA]|[EG]}KY 7.7584;6.9315;5.7401;5.7132;4.9132;1.4949 +;-;-;-;-;- + 198 + 1 2.105 63727.8 1.0 2642 3412 6052 DOHH2_400M_050219_1,6056 DOHH2_400M_050219_1,6056,YVEINGEKY True True YVEINGEKY 33.136805 557.774707019329 1549934.25 6052.0 ENSG00000149418|ENST00000278742|ST14;;ENST00000524718.5_1_11:130059967-130066600:+|nuORF 6.906755765279134 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6057 33.141 207.0 414840.0 25 0 33304.0 + 41442 VPLLPMAVML 10 113 361.88025375632446 1082.6189318691734 3 361.8799926638603 MULTI CID FTMS 0 0 0 6052 155697.828125 1.0 0 0.0 5 Unmodified _VPLLPMAVML_ REV__ENSG00000104872|ENST00000262265|PIH1D1;REV__ENST00000595633.5_1_19:49949641-49950433:-|nuORF;REV__ENST00000602076.5_1_19:49949641-49950083:-|nuORF 18.13498045792455 0.5432546531930572 1 S{I|L} 2 -1 23.733 0.0 0.0 2.1922 0.0 0.0 864.494028970454 0.0 864.494028970454 0.0 15.774509799928715 0.0 0.0 0 0.5774509799928715 0.0 0.0 0.0 S{I|L} 2.1922 - 42 1 2.105 71874.5 1.0 2643 3412 6052 DOHH2_400M_050219_1,6057 DOHH2_400M_050219_1,6057,VPLLPMAVML False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6058 33.148 398.0 261370.0 25 0 20274.0 + 272 ADHLANSW 8 141 457.2119383402155 912.409323747231 2 457.2113525271416 MULTI CID FTMS 0 0 0 6052 152038.859375 0.9344603468681492 -2 0.1951103210449218 6 Unmodified _ADHLANSW_ ENSG00000175221|ENST00000325464|MED16;nc|ENSG00000175221|Q9Y2X0-2|MED16;nc|ENSG00000175221|Q9Y2X0-3|MED16;nc|ENSG00000175221|Q9Y2X0-4|MED16;nc|ENSG00000175221|Q9Y2X0-5|MED16 32.30548876998284 0.3644845974844379 1 [H{I|L}]DAANSW 8 4 + 45.243 0.0 0.0 4.9586 4.9586 85.019 0.0 0.0 0.0 7.010780949035869 25.193284129195213 7.010780949035869 9.2621378583908 0 0.805462187404089 0.8239087409443188 0.2396518287104437 0.0 [H{I|L}]DAANSW;[H{I|L}]DAAGGSW;[{I|L}A][HD]ANSW;[H{I|L}]DQQSW;{[CT]|[{M(Oxidation (M))|F}G]}S[KC]VSW;[YQ][KC]VSW;[{I|L}A][HD]AGGSW;{[CT]|[{M(Oxidation (M))|F}G]}[R{M(Oxidation (M))|F}]NS{[DA]|[EG]};[C(Carbamidomethyl (C))H]A[RP]SW;[R{M(Oxidation (M))|F}]{[CT]|[{M(Oxidation (M))|F}G]}NS{[DA]|[EG]} 4.9586;3.9435;3.5581;3.1211;2.8931;2.6055;2.543;2.2933;2.0666;1.8295 -;-;-;-;-;-;-;-;-;- 245 1 2.105 83431.1 1.0 2644 3412 6052 DOHH2_400M_050219_1,6058 DOHH2_400M_050219_1,6058,ADHLANSW False True ADHLANSW 33.147835 457.211352527142 1019593.9375 6052.0 nc|ENSG00000175221|Q9Y2X0-3|MED16;;nc|ENSG00000175221|Q9Y2X0-5|MED16;;ENSG00000175221|ENST00000325464|MED16;;nc|ENSG00000175221|Q9Y2X0-4|MED16;;nc|ENSG00000175221|Q9Y2X0-2|MED16 5.161219596862793 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6060 33.162 675.0 285080.0 25 0 44714.0 -1 0 159 399.7813995271813 797.5482461211625 2 399.7816345095634 MULTI CID FTMS 0 0 0 6059 107910.9375 0.5966587524550845 -3 0.2226066589355468 1 1 [VG]{I|L}KR{I|L}{I|L} 7 -1 + 33.63 0.0 0.0 4.2167 4.2167 83.281 0.0 0.0 0.0 22.52076184712097 6.234230429434874 6.234230429434874 11.153565665482857 0 0.1989700043360188 1.6989700043360187 0.0 0.0 [VG]{I|L}KR{I|L}{I|L};{I|L}[VG]KR{I|L}{I|L} 4.2167;2.8182 -;- 45 + 1 2.105 152959.4 1.0 2645 3413 6059 DOHH2_400M_050219_1,6060 DOHH2_400M_050219_1,6060, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6061 33.165 122.0 403980.0 25 0 57998.0 + 11197 GENLKTEQW 9 87 552.7693423935747 1103.5241318539493 2 552.7698852419853 MULTI CID FTMS 0 0 0 6059 259900.75 0.4470255696296967 -4 0.2998161315917969 2 Unmodified _GENLKTEQW_ ENSG00000104973|ENST00000312865|MED25;nc|ENSG00000104973|Q71SY5-4|MED25;nc|ENSG00000104973|Q71SY5-5|MED25;nc|ENSG00000104973|Q71SY5-6|MED25 27.628801355627647 0.1796483985696185 1 {[DA]|[EG]}N{I|L} 4 5 28.02 0.0 0.0 2.5392 0.0 0.0 0.0 687.310422707718 687.310422707718 4.309093686208669 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}N{I|L} 2.5392 + + 52 1 2.105 47007.2 1.0 2646 3413 6059 DOHH2_400M_050219_1,6061 DOHH2_400M_050219_1,6061,GENLKTEQW False True GENLKTEQW 33.164655 552.769885241985 3289564.75 6059.0 nc|ENSG00000104973|Q71SY5-5|MED25;;ENSG00000104973|ENST00000312865|MED25;;nc|ENSG00000104973|Q71SY5-4|MED25;;nc|ENSG00000104973|Q71SY5-6|MED25 4.120739777882894 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6062 33.171 330.0 259860.0 25 0 25290.0 -1 0 117 386.6982878484446 771.3820227636892 2 386.6974975466728 MULTI CID FTMS 0 0 0 6059 150979.34375 1.0 0 0.0 3 1 {[{M(Oxidation (M))|F}D]|MM}{I|L}KSY 6 -1 + 22.273 0.0 0.0 2.8874 2.8874 80.613 0.0 0.0 0.0 5.998461003289091 5.998461003289091 5.998461003289091 14.975475376234469 0 0.2887254899964357 0.0 0.0 0.0 {[{M(Oxidation (M))|F}D]|MM}{I|L}KSY;[K{I|L}][HM]{M(Oxidation (M))|F}P 2.8874;0.946 -;- 81 + 1 2.105 74436.2 1.0 2647 3413 6059 DOHH2_400M_050219_1,6062 DOHH2_400M_050219_1,6062, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6063 33.176 279.0 257740.0 25 0 9000.3 + 29100 QEPDFEEKRF 10 111 442.2103173350175 1323.6091226052529 3 442.2103759646416 MULTI CID FTMS 0 0 0 6059 143349.984375 0.6985575193773895 6 -0.2256851196289062 4 Unmodified _QEPDFEEKRF_ ENSG00000158545|ENST00000301011|ZC3H18 27.128809495255545 0.3591624933674284 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}EH[{I|L}V]NP 11 5 + 44.395 0.0 0.0 3.3541 3.3541 73.291 0.0 0.0 0.0 7.259501639771273 3.841549024253844 3.841549024253844 3.841549024253844 0 0.2302046884880938 0.0 0.3807196863200844 0.7887254899964358 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}EH[{I|L}V]NP;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}EEKR{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}EH{[NV]|[RG]}{I|L}P;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}EH{[NV]|[RG]}P{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[DP]EH[{I|L}V]NP;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}EH[{I|L}V]GGP;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[DP]EEKR{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[DP]EH{[NV]|[RG]}{I|L}P;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[DP]EH{[NV]|[RG]}P{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}E[PG][RH]{I|L} 3.3541;3.0638;2.8557;2.7092;2.1649;2.0685;1.8746;1.6665;1.52;1.3282 -;+;-;-;-;-;-;-;-;- + 248 + 1 2.105 64379.1 1.0 2648 3413 6059 DOHH2_400M_050219_1,6063 DOHH2_400M_050219_1,6063,QEPDFEEKRF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6065 33.184 214.0 259960.0 25 0 22888.0 -1 TNPLGFMGI 9 90 483.2416184253863 0 483.2440673708916 PEAK CID FTMS 0 0 0 6064 198751.78125 0.926318841913746 1 -0.0304946899414062 1 Oxidation (M) _TNPLGFM(Oxidation (M))GI_ ENSG00000102043|ENST00000374852|MTMR8;nc|ENSG00000102043|Q96EF0-2|MTMR8 10.823927491677226 0.3028200641087142 1 DS 2 -1 10.969 0.0 0.0 1.1373 0.0 0.0 215.1002889974539 544.2912691705686 759.3915581680226 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DS 1.1373 - 9 + 1 2.112 51302.0 1.0 2649 3414 6064 DOHH2_400M_050219_1,6065 DOHH2_400M_050219_1,6065,TNPLGFMGI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6066 33.187 187.0 333020.0 25 0 30493.0 + 18228 KVFQIQEI 8 104 502.79413228297057 0 502.7944518923759 PEAK CID FTMS 0 0 0 6064 124369.90625 0.2820135515187228 5 -0.1977729797363281 2 Unmodified _KVFQIQEI_ REV__ENSG00000164749|ENST00000396423|HNF4G;REV__nc|ENSG00000164749|Q14541-2|HNF4G;REV__nc|ENSG00000164749|Q14541|HNF4G 15.847184025352805 0.4758297917908462 1 T 1 -1 11.722 0.0 0.0 1.168 0.0 0.0 293.13897149777864 606.3628634088499 899.5018349066286 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.5 0.0 T 1.168 - 12 + 1 2.112 50249.0 1.0 2650 3414 6064 DOHH2_400M_050219_1,6066 DOHH2_400M_050219_1,6066,KVFQIQEI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6067 33.19 104.0 444760.0 25 0 51770.0 + 8374 ESDSEDNSSES 11 73 593.2071348338487 1184.3997167344974 2 593.2076904177666 MULTI CID FTMS 0 0 0 6064 437835.625 0.7940413208386583 -2 0.0554084777832031 3 Unmodified _ESDSEDNSSES_ REV__ENSG00000181555|ENST00000409792|SETD2;REV__nc|ENSG00000181555|Q9BYW2-2|SETD2;REV__nc|ENSG00000181555|Q9BYW2-3|SETD2 18.1463463914782 0.6576820063886638 1 {I|L}Y 2 -1 25.217 0.0 0.0 2.1291 0.0 0.0 890.2415574100818 0.0 890.2415574100818 0.0 8.102510675630956 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}Y 2.1291 - 47 + 1 2.112 37006.1 1.0 2651 3414 6064 DOHH2_400M_050219_1,6067 DOHH2_400M_050219_1,6067,ESDSEDNSSES False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6068 33.192 142.0 418710.0 25 0 58797.0 + 23389 LTDRGVMSY 9 87 521.2547822060964 1040.4950114789926 2 521.2551147341728 MULTI CID FTMS 0 0 0 6064 150966.859375 0.8981396322508115 1 -0.0304946899414062 4 Unmodified _LTDRGVMSY_ ENSG00000126456|ENST00000377139|IRF3;ENST00000602190.1_1_19:50164877-50165571:-|nuORF;nc|ENSG00000126456|Q14653-4|IRF3 22.736283301280096 0.2418982879461534 1 SY 2 7 27.351 0.0 0.0 2.6287 0.0 0.0 772.3887015198114 0.0 772.3887015198114 0.0 16.09673323955723 0.0 0.0 0 0.5 0.0 0.2887254899964357 0.0 + SY 2.6287 + + 42 + 1 2.112 49015.9 1.0 2652 3414 6064 DOHH2_400M_050219_1,6068 DOHH2_400M_050219_1,6068,LTDRGVMSY False True LTDRGVMSY 33.192415 521.255114734173 810717.625 6064.0 ENST00000602190.1_1_19:50164877-50165571:-|nuORF;;nc|ENSG00000126456|Q14653-4|IRF3;;ENSG00000126456|ENST00000377139|IRF3 2.2024199962615967 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6069 33.206 800.0 179150.0 25 0 16908.0 + 32932 SELEYDMKKY 10 119 653.3053975566676 1304.596242180135 2 653.3050414919853 MULTI CID FTMS 0 0 0 6064 129521.4140625 0.2922152493374071 -3 0.1491127014160156 5 Unmodified _SELEYDMKKY_ ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF 66.68293810318366 0.0190556348240626 1 {[ES]|[DT]|[{I|L}C]}{I|L}EYDMKKY 10 0 + 77.454 0.0 0.0 5.937 5.937 92.514 0.0 0.0 0.0 28.707515984349925 13.037275116073346 13.037275116073346 35.56105404687884 0 1.424742501084005 0.0 0.8807196863200843 0.3252574989159953 + + {[ES]|[DT]|[{I|L}C]}{I|L}EYDMKKY;{[ES]|[DT]|[{I|L}C]}{I|L}EYD[RP]A[EP];{[ES]|[DT]|[{I|L}C]}{I|L}E[RD]{[YC]|[HE]}KY;Y[{I|L}A][C(Carbamidomethyl (C))N]DMKKY;{[ES]|[DT]|[{I|L}C]}{I|L}E[RD]{I|L}{M(Oxidation (M))|F}A[EP];Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KNYKC(Carbamidomethyl (C))[VP];{[ES]|[DT]|[{I|L}C]}{I|L}[Y{M(Oxidation (M))|F}]YKC(Carbamidomethyl (C))[VP];Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KNKYC(Carbamidomethyl (C))[VP];{[ES]|[DT]|[{I|L}C]}{I|L}[Y{M(Oxidation (M))|F}]KYC(Carbamidomethyl (C))[VP];Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KNYK[CG][VP] 5.937;3.2111;3.0057;2.9808;2.2793;1.9218;1.8475;1.826;1.7518;1.2193 +;-;-;-;-;-;-;-;-;- + 1430 + 1 2.112 113611.2 0.6700000166893005 2653 3414 6064 DOHH2_400M_050219_1,6069 DOHH2_400M_050219_1,6069,SELEYDMKKY True True SELEYDMKKY 33.206253 653.305041491985 3993319.5 6064.0 ENSG00000151503|ENST00000534548|NCAPD3;;ENST00000525964.6_1_11:134022841-134052943:-|nuORF 7.933947404225667 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6071 33.211 38.0 1373800.0 25 0 122130.0 + 18442 KYFDEHYEY 9 83 647.2745931728801 1292.5346334125602 2 647.2752563357353 MULTI CID FTMS 0 0 0 6070 1397638.5 0.0221386489422116 6 -0.3687934875488281 1 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 51.41523569358685 0.0372669606867193 1 KY{M(Oxidation (M))|F}DEHYEY 9 0 + 70.799 0.0 0.0 5.4775 5.4775 83.331 0.0 0.0 0.0 9.59183145787911 13.740984232451012 9.59183145787911 7.034021960761265 0 2.4489700043360187 0.0 0.4247425010840047 0.0 + + KY{M(Oxidation (M))|F}DEHYEY;[YE]H{[{M(Oxidation (M))|F}D]|MM}KYEY;[YE]H{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RYEY;[YE]H{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GVYEY;[YE]H[YQ]VYEY;[YE]H[Y{M(Oxidation (M))|F}]DEKY;[YE]H{[{M(Oxidation (M))|F}D]|MM}YEKY;[YE]H[Y{M(Oxidation (M))|F}]DKEY;[YE]H{[{M(Oxidation (M))|F}D]|MM}YKEY;{[YC]|[HE]}D{M(Oxidation (M))|F}YKYEY 5.4775;4.9333;4.7004;4.4883;4.4675;4.4059;4.3871;4.173;4.1542;4.0742 +;-;-;-;-;-;-;-;-;- + 1061 + 1 2.112 46739.0 1.0 2654 3415 6070 DOHH2_400M_050219_1,6071 DOHH2_400M_050219_1,6071,KYFDEHYEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6072 33.215 216.0 283450.0 25 0 23881.0 + 32933 SELEYDMKKY 10 75 435.8726097103317 1304.5959997311952 3 435.8728515505791 MULTI CID FTMS 0 0 0 6070 149816.34375 0.4571915995630756 -2 0.0584068298339843 2 Unmodified _SELEYDMKKY_ ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF 42.83518252547288 0.1276281763412153 1 {[QN]|[E{I|L}]|[KN]}SEYDMKKY 10 2 {[QN]|[E{I|L}]|[KN]}S + + 56.367 22.094 6.7122 4.3207 4.3207 54.204 0.0 0.0 0.0 0.0 34.273724768395006 0.0 0.0 0 0.3494850021680094 0.0 0.9247425010840048 0.6694451763165201 {[QN]|[E{I|L}]|[KN]}SEYDMKKY 4.3207 - 185 + 1 2.112 60592.8 1.0 2655 3415 6070 DOHH2_400M_050219_1,6072 DOHH2_400M_050219_1,6072,SELEYDMKKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6073 33.229 800.0 266790.0 25 0 12593.0 + 7036 EELEKLQQY 9 190 590.2981238928029 1178.5816948524057 2 590.2977172732353 MULTI CID FTMS 0 0 0 6070 158764.765625 0.0496544615232087 -4 0.1796073913574218 3 Unmodified _EELEKLQQY_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 107.1870275148908 0.0071859432680538 1 [AG]{I|L}KE{I|L}EEQY 10 6 + 53.364 0.0 0.0 4.5278 4.5278 73.464 0.0 0.0 0.0 1.3250999890260928 10.53395642852614 1.3250999890260928 1.3250999890260928 0 0.3494850021680094 1.3010299956639813 1.6237125054200234 1.2198565171985376 [AG]{I|L}KE{I|L}EEQY;{[QN]|[E{I|L}]|[KN]}KQ{I|L}EEQY;[AG]{I|L}KE{I|L}EQEY;{[QN]|[E{I|L}]|[KN]}KQ{I|L}EQEY;[Q{I|L}]KE{I|L}EEQY;[{I|L}A]GKE{I|L}EEQY;[AG]{I|L}KE{I|L}QEEY;[{I|L}A]NS{I|L}{I|L}EEQY;[AG]{I|L}KE{I|L}EE[AG]Y;{[QN]|[E{I|L}]|[KN]}K{I|L}QEEQY 4.5278;4.4154;4.1491;4.0366;3.9463;3.887;3.7887;3.7788;3.7502;3.7271 -;-;-;-;-;-;-;-;-;- 6790 1 2.112 161442.3 0.6800000071525574 2656 3415 6070 DOHH2_400M_050219_1,6073 DOHH2_400M_050219_1,6073,EELEKLQQY True True EELEKLQQY 33.228951 590.297717273235 16946706.0 6070.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 5.781181971232097 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6074 33.232 177.0 323100.0 25 0 31382.0 16669 KENFKNSF 8 91 507.2551794953461 1012.4958060574922 2 507.2561523318291 MULTI CID FTMS 0 0 0 6070 78857.5 0.3248469475568573 -2 0.0584068298339843 4 Unmodified _KENFKNSF_ ENSG00000003756|ENST00000347869|RBM5;ENSG00000182872|ENST00000377604|RBM10;ENST00000493993.1_1_3:50150830-50151559:+|nuORF;nc|ENSG00000182872|P98175-2|RBM10;nc|ENSG00000182872|P98175-3|RBM10;nc|ENSG00000182872|P98175-4|RBM10;nc|ENSG00000182872|P98175-5|RBM10 49.93300154707207 0.1395624531867191 1 [VS]ANNK{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 9 5 + 54.35 0.0 0.0 5.3679 5.3679 85.624 0.0 0.0 0.0 20.85348113584486 16.272022669357092 16.272022669357092 9.208187539523747 0 1.5317183090963749 2.0 0.4247425010840047 0.3807196863200844 [VS]ANNK{M(Oxidation (M))|F}S{M(Oxidation (M))|F};[VS]AGGNK{M(Oxidation (M))|F}S{M(Oxidation (M))|F};[VS]ANGGK{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NNK{M(Oxidation (M))|F}S{M(Oxidation (M))|F};WYR[WR]{M(Oxidation (M))|F};{[VA]|[{I|L}G]}SNNK{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GGNK{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NGGK{M(Oxidation (M))|F}S{M(Oxidation (M))|F};WYMAT[KT]{I|L};WY[VG][WR]{M(Oxidation (M))|F} 5.3679;4.4585;4.4585;3.3083;2.9078;2.5007;2.3935;2.3935;2.1633;1.9774 -;-;-;-;-;-;-;-;-;- 648 1 2.112 49184.8 1.0 2657 3415 6070 DOHH2_400M_050219_1,6074 DOHH2_400M_050219_1,6074,KENFKNSF False True KENGGKFSF 33.232375 507.256152331829 1247311.625 6070.0 ENSG00000102699|ENST00000381989|PARP4 3.360280195871989 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6076 33.239 245.0 347070.0 25 0 44648.0 + 23995 LVVNRNAL 8 118 449.7772745461489 897.5399961590978 2 449.7772704958916 MULTI CID FTMS 0 0 0 6075 220338.375 1.0 0 0.0 1 Unmodified _LVVNRNAL_ REV__ENSG00000256683|ENST00000243644|ZNF350 10.183394434864962 0.7604730176254005 1 VM 2 -1 17.959 0.0 0.0 2.0009 0.0 0.0 649.4201974303853 0.0 649.4201974303853 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 VM 2.0009 - 131 + 1 2.112 73893.3 1.0 2658 3416 6075 DOHH2_400M_050219_1,6076 DOHH2_400M_050219_1,6076,LVVNRNAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6077 33.253 800.0 29882.0 25 0 8142.6 -1 0 32 1182.8198142630154 3545.4376133892465 3 1183.152270495892 MULTI CID FTMS 0 0 0 6075 79839.7578125 1.0 0 0.0 2 1 E 1 -1 5.4846 0.0 0.0 0.15469 0.0 0.0 2889.2100876097525 524.1635225885374 3413.37361019829 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15469 - 2 + 1 2.112 31706.3 0.3899999856948852 2659 3416 6075 DOHH2_400M_050219_1,6077 DOHH2_400M_050219_1,6077, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6078 33.256 144.0 570780.0 25 0 49684.0 + 5466 DLRIKSQEL 9 105 367.88134916726176 1100.6222181019853 3 367.8804809451103 MULTI CID FTMS 0 0 0 6075 262319.28125 0.8519649239863742 -2 0.0566139221191406 3 Unmodified _DLRIKSQEL_ ENSG00000197102|ENST00000360184|DYNC1H1 16.149105407346934 0.3995459350917656 1 {NN|[MP]|[D{I|L}]|[EV]}R{I|L}KS 6 3 27.566 0.0 0.0 2.5045 0.0 0.0 0.0 385.1739471944198 385.1739471944198 12.961442290623726 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.5 + {NN|[MP]|[D{I|L}]|[EV]}R{I|L}KS 2.5045 + + 117 1 2.112 70988.1 1.0 2660 3416 6075 DOHH2_400M_050219_1,6078 DOHH2_400M_050219_1,6078,DLRIKSQEL False True DLRIKSQEL 33.256238 367.88048094511 1705811.875 6075.0 ENSG00000197102|ENST00000360184|DYNC1H1 -0.272448256611824 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6079 33.267 597.0 267750.0 25 0 18043.0 + 727 AEPYRPIQY 9 141 568.7907493097405 1135.5669456862809 2 568.7925292849541 MULTI CID FTMS 0 0 0 6075 121425.9453125 0.194148637172719 -4 0.1120223999023437 4 Unmodified _AEPYRPIQY_ ENSG00000144283|ENST00000389759|PKP4;nc|ENSG00000144283|Q99569-2|PKP4 69.10491478415734 0.0214449631113747 1 {[CP]|[EA]}PYR[{I|L}P]QY 9 0 + 51.282 0.0 0.0 4.516 4.516 83.969 0.0 0.0 0.0 8.449784982942454 14.09256854528806 8.449784982942454 10.268024924119672 0 1.3737125054200234 0.0 0.0 1.5994850021680094 + + {[CP]|[EA]}PYR[{I|L}P]QY;{[CP]|[EA]}YPR[{I|L}P]QY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R[{I|L}P]Q{[CP]|[EA]}Y;{[CP]|[EA]}PYR[{I|L}P][AG]Y;{[CP]|[EA]}PYR[{I|L}P]S{[CT]|[{M(Oxidation (M))|F}G]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R[{I|L}P]{[CP]|[EA]}QY;{[CP]|[EA]}YPR[{I|L}P]S{[CT]|[{M(Oxidation (M))|F}G]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R[Q{I|L}]P{[CP]|[EA]}Y;{[CP]|[EA]}P[DP][{I|L}P]R{[QN]|[E{I|L}]|[KN]};{[CP]|[EA]}YPR[{I|L}P][AG]Y 4.516;3.6118;3.3434;3.3311;3.1074;2.8132;2.6435;2.6105;2.4662;2.4268 +;-;-;-;-;-;-;-;-;- + 1204 + 1 2.112 121693.8 1.0 2661 3416 6075 DOHH2_400M_050219_1,6079 DOHH2_400M_050219_1,6079,AEPYRPIQY True True AEPYRPIQY 33.266694 568.792529284954 8483010.0 6075.0 ENSG00000144283|ENST00000389759|PKP4;;nc|ENSG00000144283|Q99569-2|PKP4 6.872463385264079 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6080 33.273 337.0 174760.0 25 0 18769.0 + 43566 YAAPHPLQSY 10 97 573.7828329441497 1145.5511129550994 2 573.7826415896416 MULTI CID FTMS 0 0 0 6075 85113.1171875 0.9782242876107964 -1 0.0261192321777343 5 Unmodified _YAAPHPLQSY_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 43.77239144664712 0.1177314611616471 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}APH[TP]{[QV]|[N{I|L}]|[RA]|[KV]}Y 10 2 + 40.11 0.0 0.0 3.5014 3.5014 75.284 0.0 0.0 0.0 13.683174735333168 2.77696854845523 2.77696854845523 5.576760784031421 0 0.75 2.0 0.4247425010840047 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}APH[TP]{[QV]|[N{I|L}]|[RA]|[KV]}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}W[VS]M{[QV]|[N{I|L}]|[RA]|[KV]}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}APH[TP][VS]{[CT]|[{M(Oxidation (M))|F}G]};[HM]Q[{I|L}P]M{[QV]|[N{I|L}]|[RA]|[KV]}Y;[HS][{I|L}A][TP]HPADT;[HS][{I|L}A]M[{I|L}P]QSY;[HM]Q[{I|L}P]M[VS]{[CT]|[{M(Oxidation (M))|F}G]} 3.5014;3.0145;2.2848;1.5314;0.48028;0.15905;0.059075 -;-;-;-;-;-;- 92 + 1 2.112 49387.2 1.0 2662 3416 6075 DOHH2_400M_050219_1,6080 DOHH2_400M_050219_1,6080,YAAPHPLQSY True True YAAPHPLQSY 33.272813 573.782641589642 645991.8125 6075.0 ENSG00000126464|ENST00000418929|PRR12;;nc|ENSG00000126464|Q9ULL5-2|PRR12 8.911383628845215 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6081 33.287 800.0 126270.0 25 0 8618.4 + + -1 ELDRQELTY 9 142 582.2799321775226 1162.545311421845 2 583.7882568240166 MULTI CID FTMS 0 0 0 6075 84908.5234375 0.728785373022775 -2 0.0566139221191406 6 Carbamidomethyl (C) _IEFSKHGSVC(Carbamidomethyl (C))_ ENSG00000154945|ENST00000285243|ANKRD40 18.1463463914782 0.5430639438673815 1 {[QN]|[E{I|L}]|[KN]}[RD]QE{I|L}TC(Carbamidomethyl (C)) 9 -1 + 50.613 0.0 0.0 4.3536 4.3536 82.091 0.0 0.0 0.0 0.5066241531378068 25.072647375211243 0.5066241531378068 9.208187539523747 0 0.0 1.5228787452803376 2.128144697160131 0.0 {[QN]|[E{I|L}]|[KN]}[RD]QE{I|L}TC(Carbamidomethyl (C));{[QN]|[E{I|L}]|[KN]}[RD][AG]E{I|L}TC(Carbamidomethyl (C));{[QN]|[E{I|L}]|[KN]}[RD]QT{I|L}EC(Carbamidomethyl (C));{[QN]|[E{I|L}]|[KN]}[RD]QE{I|L}GCT;{[QN]|[E{I|L}]|[KN]}{[ET]|[MV]}[RN]{I|L}EC(Carbamidomethyl (C));{[QN]|[E{I|L}]|[KN]}[RD][AG]T{I|L}EC(Carbamidomethyl (C));{[QN]|[E{I|L}]|[KN]}[RD][AG]E{I|L}GCT;[PS][W{I|L}]{[SA]|[TG]}E{I|L}TC(Carbamidomethyl (C));{[QN]|[E{I|L}]|[KN]}[RD]QT{I|L}T{[MG]|[TS]};{[QD]|[EN]|[WG]|[KD]|[RS]}[KT][RN]{I|L}EC(Carbamidomethyl (C)) 4.3536;3.5616;3.4033;3.1254;2.7835;2.6113;2.3371;1.9158;1.9036;1.9025 -;-;-;-;-;-;-;-;-;- 616 1 2.112 78765.8 0.5299999713897705 2663 3416 6075 DOHH2_400M_050219_1,6081 DOHH2_400M_050219_1,6081,IEFSKHGSVC False False ELDRQELTY 33.286642 583.788256824017 763621.4375 6075.0 ENSG00000154945|ENST00000285243|ANKRD40 4.393293380737305 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6082 33.291 207.0 269270.0 25 0 23647.0 -1 0 101 500.2711073468131 499.2638308802131 1 500.2701599001884 MULTI CID FTMS 0 0 0 6075 223930.921875 0.9684594730512086 -1 0.0261192321777343 7 1 {I|L} 1 -1 10.596 0.0 0.0 2.1223 0.0 0.0 368.1690870831412 0.0 368.1690870831412 0.0 7.83172219530714 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.1223 - 13 + 1 2.112 50064.9 1.0 2664 3416 6075 DOHH2_400M_050219_1,6082 DOHH2_400M_050219_1,6082, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6084 33.295 22.0 1713100.0 25 0 178710.0 + 35213 SSDPASQLSY 10 69 527.7379976938034 1053.4614424544068 2 527.7383911013603 MULTI CID FTMS 0 0 0 6083 2100062.5 0.3708801846292576 4 -0.2844657897949219 1 Unmodified _SSDPASQLSY_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000536066.1_1_12:2967806-2973707:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 62.57269311338072 0.0298375429882549 1 [HM]{I|L}Q[{M(Oxidation (M))|F}E]SY 8 8 + 42.752 0.0 0.0 4.0583 4.0583 73.209 0.0 0.0 0.0 2.355997203748004 2.355997203748004 2.355997203748004 2.355997203748004 0 0.0 0.0 1.0356668758921828 0.0 [HM]{I|L}Q[{M(Oxidation (M))|F}E]SY;{[C(Carbamidomethyl (C))E]|[WC]}[PA]SQ{I|L}SY;{[CA]|SS}D[PA]SQ{I|L}SY;[HM]{I|L}[AG][{M(Oxidation (M))|F}E]SY;{[C(Carbamidomethyl (C))E]|[WC]}[PA]S[AG]{I|L}SY;[PA]{[C(Carbamidomethyl (C))E]|[WC]}SQ{I|L}SY;{[CA]|SS}D[PA]S[AG]{I|L}SY;[PA]D{[CA]|SS}SQ{I|L}SY;[PA]S{[C(Carbamidomethyl (C))E]|[WC]}Q{I|L}SY;[AG]S{I|L}APS{[DS]|[MA]|[CV]|TT}SY 4.0583;3.8346;3.6408;3.1791;2.9606;2.8382;2.7709;2.601;2.0615;2.0521 -;-;+;-;-;-;-;-;-;- + 226 + 1 2.112 35644.5 1.0 2665 3417 6083 DOHH2_400M_050219_1,6084 DOHH2_400M_050219_1,6084,SSDPASQLSY True True SSDPASQLSY 33.295369 527.73839110136 181604272.0 6083.0 ENSG00000111206|ENST00000359843|FOXM1;;nc|ENSG00000111206|Q08050-2|FOXM1;;ENST00000536066.1_1_12:2967806-2973707:-|nuORF;;nc|ENSG00000111206|Q08050-3|FOXM1 7.286281267801921 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6085 33.297 77.0 698000.0 25 0 76185.0 + 33120 SETDMVRQI 9 75 539.7629806260917 1077.5114083189833 2 539.7637817263603 MULTI CID FTMS 0 0 0 6083 674228.4375 0.4064452416203593 3 -0.1494140625 2 Unmodified _SETDMVRQI_ ENSG00000149823|ENST00000279281|VPS51 41.8396318013385 0.0653578398400075 1 {[ES]|[DT]|[{I|L}C]}TDMV 6 3 37.664 0.0 0.0 3.4954 0.0 0.0 0.0 412.2308443658813 412.2308443658813 22.971062485323515 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}TDMV 3.4954 + + 69 + 1 2.112 45948.7 1.0 2666 3417 6083 DOHH2_400M_050219_1,6085 DOHH2_400M_050219_1,6085,SETDMVRQI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6086 33.3 122.0 527590.0 25 0 39558.0 + 29398 QLDERRLYY 9 85 419.21880808017545 1254.6345948407263 3 419.2185851931572 MULTI CID FTMS 0 0 0 6083 316511.46875 1.0 0 0.0 3 Unmodified _QLDERRLYY_ ENSG00000185359|ENST00000329138|HGS;nc|ENSG00000185359|O14964-2|HGS 20.580933911654288 0.2795815587326093 1 Q{I|L}DY 4 5 39.385 0.0 0.0 3.1392 0.0 0.0 0.0 732.3799508318168 732.3799508318168 21.15865011156764 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 Q{I|L}DY 3.1392 - 49 + 1 2.112 56939.6 1.0 2667 3417 6083 DOHH2_400M_050219_1,6086 DOHH2_400M_050219_1,6086,QLDERRLYY False True QLDERRLYY 33.299656 419.218585193157 1872922.375 6083.0 ENSG00000185359|ENST00000329138|HGS;;nc|ENSG00000185359|O14964-2|HGS 3.41628360748291 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6087 33.302 115.0 597010.0 25 0 110680.0 + 18446 KYFDEHYEY 9 84 431.8524612424013 1292.535554327404 3 431.8524047732353 MULTI CID FTMS 0 0 0 6083 314453.5625 0.011302797249776 8 -0.7150764465332031 4 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 17.11289562659939 0.3734572693229295 1 Y 1 8 14.604 0.0 0.0 1.1299 0.0 0.0 1111.4614251543555 0.0 1111.4614251543555 0.0 -1.9504625720438893 -1.9504625720438893 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1299 + + 92 + 1 2.112 59956.7 1.0 2668 3417 6083 DOHH2_400M_050219_1,6087 DOHH2_400M_050219_1,6087,KYFDEHYEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6088 33.306 180.0 353470.0 25 0 27037.0 + 45305 YSEVYPGQQY 10 87 617.2744025658556 1232.534252198511 2 617.2751342654228 MULTI CID FTMS 0 0 0 6083 286594.5625 0.8585907561372307 1 -0.0619850158691406 5 Unmodified _YSEVYPGQQY_ ENSG00000122515|ENST00000309315|ZMIZ2;nc|ENSG00000122515|Q8NF64-2|ZMIZ2;nc|ENSG00000122515|Q8NF64-3|ZMIZ2 55.23464941255904 0.0494277333541689 1 [MT]EVNY[VS]QY 10 6 + 38.039 0.0 0.0 3.0862 3.0862 71.117 0.0 0.0 0.0 2.8295020179733186 1.1219583558280988 1.1219583558280988 2.8295020179733186 0 0.6435078169319297 1.0969100130080565 0.0 0.0 [MT]EVNY[VS]QY;{NN|[MP]|[D{I|L}]|[EV]}SY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WQY;{[{M(Oxidation (M))|F}C]|[YS]}EV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WQY;[MT][{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WQY;{[ES]|[DT]|[{I|L}C]}YV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WQY;[YE]SV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WQY;{[ES]|[DT]|[{I|L}C]}VY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WQY;[MT]EVR[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]QY;[MT]EY{[NV]|[RG]}WQY;[MT]{[NV]|[RG]}EYWQY 3.0862;2.8567;2.7798;2.7622;2.7197;2.6183;2.5779;2.4776;2.4776;2.4134 -;-;-;-;-;-;-;-;-;- 860 1 2.112 51643.0 1.0 2669 3417 6083 DOHH2_400M_050219_1,6088 DOHH2_400M_050219_1,6088,YSEVYPGQQY True True YSEVYPGQQY 33.305571 617.275134265423 1719327.25 6083.0 nc|ENSG00000122515|Q8NF64-3|ZMIZ2;;ENSG00000122515|ENST00000309315|ZMIZ2;;nc|ENSG00000122515|Q8NF64-2|ZMIZ2 7.76586373647054 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6089 33.308 133.0 510910.0 25 0 90633.0 + 8385 ESEDPDYYQY 10 95 654.7489179283465 1307.4832829234929 2 654.7493163943291 MULTI CID FTMS 0 0 0 6083 264513.53125 0.0280638455633807 -4 0.1427345275878906 6 Unmodified _ESEDPDYYQY_ ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I 61.357469665136826 0.0330252915653943 1 [DP]DD{[ET]|[MV]}YYQY 10 5 + 36.132 0.0 0.0 2.7635 2.7635 66.818 0.0 0.0 0.0 0.1093092803169 10.439455175668757 0.1093092803169 0.1093092803169 0 0.6435078169319297 0.0 1.4802046884880935 0.0 [DP]DD{[ET]|[MV]}YYQY;YYE{[C(Carbamidomethyl (C))G]|[NC]}YYQY;[DP]DQ{[C(Carbamidomethyl (C))G]|[NC]}YYQY;[DP]YY[C(Carbamidomethyl (C))H]YQY;[DP]DDY{[ET]|[MV]}YQY;[DP]NE{[C(Carbamidomethyl (C))G]|[NC]}YYQY;[DP]Y[C(Carbamidomethyl (C))H]YYQY;[YE]Y{[C(Carbamidomethyl (C))G]|[NC]}YYQY;YY[DP][C(Carbamidomethyl (C))H]YQY;[DP]YDD{[ET]|[MV]}YQY 2.7635;2.7551;2.5181;2.4517;2.4386;2.2878;2.2419;2.1464;1.9912;1.9562 -;-;-;-;-;-;-;-;-;- 583 1 2.112 56062.9 1.0 2670 3417 6083 DOHH2_400M_050219_1,6089 DOHH2_400M_050219_1,6089,ESEDPDYYQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6090 33.312 183.0 460920.0 25 0 33134.0 + + 14219 GAVHDVKDVLDS 12 110 627.8211059443082 1253.6276589554163 2 627.8206664919853 MULTI CID FTMS 0 0 0 6083 250589.90625 0.4543952234900604 -2 0.0843276977539062 7 Unmodified _IDNHKEIDALS_ ENSG00000161634|ENST00000293371|DCD 8.97624648632007 0.8327974195962515 1 [DV]HQV{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DS 11 -1 + 53.982 0.0 0.0 4.306 4.306 76.31 0.0 0.0 0.0 3.979400086720375 16.575773191777934 3.979400086720375 3.979400086720375 0 0.5356668758921829 1.0457574905606752 0.4247425010840047 0.0 [DV]HQV{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DS;[HD]VQV{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DS;[AG]VHDV{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DS;[DV]HQ[WR]V{I|L}DS;{NN|[MP]|[D{I|L}]|[EV]}[HN]V{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DS;[DV]H[AG]V{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DS;[DV]HQV{[QD]|[EN]|[WG]|[KD]|[RS]}[RN]GS;[HD]VQ[WR]V{I|L}DS;[DV]HQV[WR]{I|L}DS;[AG]VHD[WR]V{I|L}DS 4.306;3.9886;3.9638;3.7815;3.6712;3.5779;3.5307;3.4641;3.4427;3.4364 -;-;-;-;-;-;-;-;-;- 1716 1 2.112 66054.8 1.0 2671 3417 6083 DOHH2_400M_050219_1,6090 DOHH2_400M_050219_1,6090,IDNHKEIDALS False False GAVHDVKDVLDS 33.311833 627.820666491985 2811509.75 6083.0 ENSG00000161634|ENST00000293371|DCD 8.238152980804443 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6091 33.317 303.0 336090.0 25 0 21080.0 + 25507 NEMQPNGKVF 10 128 582.2799321775226 1162.545311421845 2 582.2795287966728 MULTI CID FTMS 0 0 0 6083 228848.75 0.3887612806258946 -3 0.1148223876953125 8 Unmodified _NEMQPNGKVF_ ENSG00000068366|ENST00000672401|ACSL4;nc|ENSG00000068366|O60488|ACSL4 79.59630418116434 0.0173986606250113 1 {[QD]|[EN]|[WG]|[KD]|[RS]}MQ 4 6 34.218 0.0 0.0 2.9434 0.0 0.0 0.0 657.337980449442 657.337980449442 5.21234528656294 0.0 0.0 0.0 0 1.0 0.0 0.6861818737241735 0.7179001828205483 + {[QD]|[EN]|[WG]|[KD]|[RS]}MQ 2.9434 + + 632 1 2.112 82068.5 1.0 2672 3417 6083 DOHH2_400M_050219_1,6091 DOHH2_400M_050219_1,6091,NEMQPNGKVF True True NEMQPNGKVF 33.317387 582.279528796673 3399037.5 6083.0 ENSG00000068366|ENST00000672401|ACSL4;;nc|ENSG00000068366|O60488|ACSL4 6.689487457275391 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6092 33.329 675.0 204090.0 25 0 12724.0 + 41642 VPPQKLQAL 9 158 497.3085061755439 992.602459417888 2 497.3084289431572 MULTI CID FTMS 0 0 0 6083 101644.3984375 0.9162588785252738 -3 0.1148223876953125 9 Unmodified _VPPQKLQAL_ ENSG00000148943|ENST00000278193|LIN7C 23.1484247019978 0.2366544122328345 1 VP 2 7 42.519 0.0 0.0 4.2835 0.0 0.0 0.0 793.4572950761813 793.4572950761813 24.270220315915907 0.0 0.0 0.0 0 0.4559771852360797 1.6989700043360187 0.0 0.0 + VP 4.2835 + + 593 + 1 2.112 106662.4 1.0 2673 3417 6083 DOHH2_400M_050219_1,6092 DOHH2_400M_050219_1,6092,VPPQKLQAL False True VPPQKLQAL 33.329115 497.308428943157 1582544.0 6083.0 ENSG00000148943|ENST00000278193|LIN7C 4.076362331708272 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6093 33.339 547.0 170300.0 25 0 9995.5 + 32465 SAHEKLYSL 9 111 524.2771492926232 1046.5397456520463 2 524.2773315310478 MULTI CID FTMS 0 0 0 6083 92232.15625 0.6800833217160679 -2 0.0843276977539062 10 Unmodified _SAHEKLYSL_ ENSG00000141564|ENST00000306801|RPTOR;ENST00000577161.5_1_17:78519375-78883449:+|nuORF 59.36838082759317 0.0264317782606298 1 {[SA]|[TG]}HEK{I|L}YS{I|L} 9 0 + 57.234 0.0 0.0 5.4689 5.4689 89.475 0.0 0.0 0.0 17.61870520051602 42.62964706465603 17.61870520051602 19.5229767099463 0 1.992992819099939 1.2218487496163564 0.8252574989159953 0.0 + + {[SA]|[TG]}HEK{I|L}YS{I|L};[HA]SEK{I|L}YS{I|L};{[SA]|[TG]}H[KT][Y{I|L}]D{I|L};{[SA]|[TG]}H[KA]K[YG]W;{[SA]|[TG]}H[KA]K{[YD]|[{M(Oxidation (M))|F}M]}Q;{[SA]|[TG]}H[KT]{[QV]|[N{I|L}]|[RA]|[KV]}[YN];{[YC]|[HE]}{[SA]|[TG]}K{I|L}YS{I|L};{[SA]|[TG]}H[KA]K{[DS]|[MA]|[CV]|TT}{[CT]|[{M(Oxidation (M))|F}G]};{[CP]|[EA]}[HS]K{I|L}YS{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[YG]K{I|L}YS{I|L} 5.4689;3.6034;2.8825;2.4187;2.1451;1.9568;1.8905;1.8644;1.4346;1.4346 +;-;-;-;-;-;-;-;-;- + 275 1 2.112 76190.1 1.0 2674 3417 6083 DOHH2_400M_050219_1,6093 DOHH2_400M_050219_1,6093,SAHEKLYSL True True SAHEKLYSL 33.338725 524.277331531048 735939.6875 6083.0 ENSG00000141564|ENST00000306801|RPTOR;;ENST00000577161.5_1_17:78519375-78883449:+|nuORF 6.396393458048503 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6094 33.353 800.0 157620.0 25 0 7502.6 + 29125 QESSYIATQY 10 158 595.2724239241081 1188.5302949150162 2 595.7742187380791 MULTI CID FTMS 0 0 0 6083 86800.8046875 0.3339100509287448 -3 0.1148223876953125 11 Unmodified _QESSYIATQY_ ENSG00000143815|ENST00000272163|LBR 83.42873516780209 0.014257832770272 1 [AG]TD[MT]{I|L}A 8 9 31.22 0.0 0.0 2.6268 0.0 0.0 0.0 425.1704792805295 425.1704792805295 10.647124887093824 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.809894379144197 0.0 [AG]TD[MT]{I|L}A 2.6268 - 1542 1 2.112 94562.3 0.5400000214576721 2675 3417 6083 DOHH2_400M_050219_1,6094 DOHH2_400M_050219_1,6094,QESSYIATQY True True QESSYIATQY 33.352558 595.2732 2515161.75 6083.0 ENSG00000143815|ENST00000272163|LBR 6.523924986521403 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6096 33.361 296.0 374260.0 25 0 53982.0 -1 0 110 467.21571901911074 466.2084425525108 1 467.2155639529228 MULTI CID FTMS 0 0 0 6095 187634.09375 0.8483582893862226 -2 0.1201934814453125 1 1 Y 1 -1 12.474 0.0 0.0 2.6757 0.0 0.0 285.134237085517 0.0 285.134237085517 0.0 -2.1702770998328447 -2.1702770998328447 0.0 0 0.0 0.0 0.0 0.0 Y 2.6757 - 15 + 1 2.112 88840.1 1.0 2676 3418 6095 DOHH2_400M_050219_1,6096 DOHH2_400M_050219_1,6096, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6097 33.363 85.0 965130.0 25 0 166160.0 + -1 VRVNMKVSL 9 98 354.5417105813806 1060.6033023443415 3 354.5414001345634 MULTI CID FTMS 0 0 0 6095 369625.375 0.3016524765010715 -2 0.1201934814453125 2 Oxidation (M) _VRVNM(Oxidation (M))KVSL_ REV__ENST00000379958.2_1_7:92733414-92733462:-|nuORF 8.745405648335112 0.6093864874670651 1 [{M(Oxidation (M))|F}V]{I|L}HV 5 -1 26.911 0.0 0.0 2.5374 0.0 0.0 0.0 462.2343844049438 462.2343844049438 8.46787486224656 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{M(Oxidation (M))|F}V]{I|L}HV 2.5374 - 41 + 1 2.112 71214.5 1.0 2677 3418 6095 DOHH2_400M_050219_1,6097 DOHH2_400M_050219_1,6097,VRVNMKVSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6098 33.368 227.0 347580.0 25 0 15277.0 + 5129 DIHHKVLSL 9 120 531.308651843854 1060.602750754508 2 531.3089477419853 MULTI CID FTMS 0 0 0 6095 179817.6875 0.356827388769216 -2 0.1201934814453125 3 Unmodified _DIHHKVLSL_ ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2 67.08073823543168 0.0222274355215578 1 {I|L}DHH 4 7 57.445 0.0 0.0 5.4162 0.0 0.0 0.0 555.3531588190061 555.3531588190061 19.033306308167425 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.5 0.0 {I|L}DHH 5.4162 - 471 + 1 2.112 64554.9 1.0 2678 3418 6095 DOHH2_400M_050219_1,6098 DOHH2_400M_050219_1,6098,DIHHKVLSL True True DIHHKVLSL 33.367552 531.308947741985 3139176.0 6095.0 ENSG00000138757|ENST00000359707|G3BP2;;nc|ENSG00000138757|Q9UN86-2|G3BP2 4.704275131225586 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6099 33.374 329.0 316010.0 25 0 28810.0 + 11391 GGISGTVAAVL 11 124 472.7745234678586 943.5344940025172 2 472.7747070193291 MULTI CID FTMS 0 0 0 6095 160687.609375 0.5985373791111295 -2 0.1201934814453125 4 Unmodified _GGISGTVAAVL_ ENSG00000013306|ENST00000377095|SLC25A39;ENST00000591006.5_1_17:42397371-42398600:-|nuORF;ENST00000592372.5_1_17:42397681-42398498:-|nuORF;nc|ENSG00000013306|Q9BZJ4-2|SLC25A39 41.8396318013385 0.1840573104808743 1 {[TV]|[{I|L}S]}NAKEAV{I|L} 9 6 + 32.701 0.0 0.0 3.4658 3.4658 51.618 0.0 0.0 0.0 1.1633856484638263 6.554747923320747 1.1633856484638263 0.0 0 0.7429928190999391 0.4685210829577448 1.079689690656103 0.0 {[TV]|[{I|L}S]}NAKEAV{I|L};{[TV]|[{I|L}S]}QGKEAV{I|L};{[CP]|[EA]}KGKEAV{I|L};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}T[NG]AV{I|L};[TA]{[NV]|[RG]}KEAV{I|L};[TA]VVT[NG]AV{I|L};{[TV]|[{I|L}S]}[AG]GKEAV{I|L};{[TV]|[{I|L}S]}GGAKEAV{I|L};{[TV]|[{I|L}S]}Q{I|L}[NS]AV{I|L};[TA][VG]GKEAV{I|L} 3.4658;3.4658;3.3425;2.5934;2.5307;2.5017;2.4899;2.4899;2.4138;2.3983 -;-;-;-;-;-;-;-;-;- 1210 1 2.112 82260.8 1.0 2679 3418 6095 DOHH2_400M_050219_1,6099 DOHH2_400M_050219_1,6099,GGISGTVAAVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6101 33.381 285.0 241340.0 25 0 18916.0 + -1 AEAPGGELMGY 11 98 554.7809569649954 1107.5473609967908 2 555.2856323122978 MULTI CID FTMS 0 0 0 6100 149907.6875 0.6734295830974586 10 -1.06097412109375 1 Oxidation (M) _IEITVGSDM(Oxidation (M))K_ nc|ENSG00000173418|P61599-2|NAA20;ENSG00000173418|ENST00000334982|NAA20 10.823927491677226 0.6659270209832991 1 {I|L}T{I|L}{M(Oxidation (M))|F}[KS]GY 8 -1 35.667 0.0 0.0 3.2204 0.0 0.0 180.06465586363316 0.0 180.06465586363316 0.0 20.850847225428087 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 {I|L}T{I|L}{M(Oxidation (M))|F}[KS]GY 3.2204 - 728 + 1 2.112 57437.4 1.0 2680 3419 6100 DOHH2_400M_050219_1,6101 DOHH2_400M_050219_1,6101,IEITVGSDMK False False AEAPGGELMGY 33.381321 555.285632312298 1161984.625 6100.0 nc|ENSG00000173418|P61599-2|NAA20;;ENSG00000173418|ENST00000334982|NAA20 3.942907730738322 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6102 33.395 800.0 109080.0 25 0 5685.9 25853 NLEAWRETFPQ 11 150 695.8392276197322 1389.6639023062644 2 695.8412963747978 MULTI CID FTMS 0 0 0 6100 71608.09375 0.1573855711216932 6 -0.6321258544921875 2 Unmodified _NLEAWRETFPQ_ ENSG00000115705|ENST00000329066|TPO;nc|ENSG00000115705|P07202-2|TPO;nc|ENSG00000115705|P07202-3|TPO;nc|ENSG00000115705|P07202-4|TPO;nc|ENSG00000115705|P07202-5|TPO;nc|ENSG00000115705|P07202-7|TPO;nc|ENSG00000115705|P07202-8|TPO 23.78978130925829 0.5336113198261219 1 {[QV]|[N{I|L}]|[RA]|[KV]}NWGD{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q 11 7 + 55.926 0.0 0.0 4.0244 4.0244 78.953 0.0 0.0 0.0 2.9446387303474 28.388064727237428 2.9446387303474 8.05462187404089 0 2.1435078169319297 2.0 0.0 0.4604093769761875 {[QV]|[N{I|L}]|[RA]|[KV]}NWGD{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}YHGD{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}[Q{I|L}]{[YC]|[HE]}QW[WH];[{I|L}T][YG]{[QN]|[E{I|L}]|[KN]}WW[WH] 4.0244;3.4448;2.4305;0.95236 -;-;-;- 410 1 2.112 63654.0 0.5799999833106995 2681 3419 6100 DOHH2_400M_050219_1,6102 DOHH2_400M_050219_1,6102,NLEAWRETFPQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6103 33.398 171.0 526670.0 25 0 92029.0 + 19444 LFARLRGV 8 82 466.2956351416119 930.5767173500236 2 466.2951843142509 MULTI CID FTMS 0 0 0 6100 203923.375 0.7358813703227107 -1 0.020965576171875 3 Unmodified _LFARLRGV_ REV__ENSG00000204843|ENST00000628224|DCTN1;REV__ENST00000466110.5_1_2:74593906-74595252:-|nuORF;REV__nc|ENSG00000204843|Q14203-2|DCTN1;REV__nc|ENSG00000204843|Q14203-3|DCTN1;REV__nc|ENSG00000204843|Q14203-4|DCTN1;REV__nc|ENSG00000204843|Q14203-5|DCTN1;REV__nc|ENSG00000204843|Q14203-6|DCTN1 5.760428011301431 0.7893668129297577 1 {I|L}V 2 -1 20.969 0.0 0.0 2.2533 0.0 0.0 0.0 715.3992297169823 715.3992297169823 9.186363512511502 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 2.2533 - 24 + 1 2.112 73872.4 1.0 2682 3419 6100 DOHH2_400M_050219_1,6103 DOHH2_400M_050219_1,6103,LFARLRGV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6104 33.412 800.0 144030.0 25 0 6489.7 -1 WQEWMLSLCYF 11 135 781.8473595082772 1561.6801660833544 2 781.8488647341728 MULTI CID FTMS 0 0 0 6100 105113.140625 1.0 0 0.0 4 Carbamidomethyl (C) _WQEWMLSLC(Carbamidomethyl (C))YF_ ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA 5.731851221503515 0.8481046878870278 1 {[QN]|[E{I|L}]|[KN]}AQM[YG]QQNA{M(Oxidation (M))|F}Y 13 -1 + 70.69 0.0 0.0 4.5265 4.5265 77.047 0.0 0.0 0.0 3.959835709819004 9.063052633678062 3.959835709819004 3.959835709819004 0 0.9291746928241126 0.0 0.4303115997617928 2.538106835214472 {[QN]|[E{I|L}]|[KN]}AQM[YG]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQM[YG]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQM[YG][AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQM[YG]Q[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQM[YG]QQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[AG]M[YG]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QQM[YG]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQM[YG][AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQM[YG]Q[AG]NA{M(Oxidation (M))|F}Y 4.5265;4.273;3.9456;3.9456;3.9456;3.9456;3.9269;3.8615;3.6934;3.6934 -;-;-;-;-;-;-;-;-;- 4580 1 2.112 80921.7 0.5899999737739563 2683 3419 6100 DOHH2_400M_050219_1,6104 DOHH2_400M_050219_1,6104,WQEWMLSLCYF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6105 33.426 800.0 403540.0 25 0 32435.0 + 8394 ESEEEEDDDSY 11 184 673.7229102379075 1345.431267542615 2 673.7219116091728 MULTI CID FTMS 0 0 0 6100 81289.921875 0.1728624590899274 -2 0.0829505920410156 5 Unmodified _ESEEEEDDDSY_ REV__ENSG00000048649|ENST00000308488|RSF1;REV__nc|ENSG00000048649|Q96T23-2|RSF1;REV__nc|ENSG00000048649|Q96T23-3|RSF1 56.17704186161178 0.0846604386095034 1 ESEDYY[C(Carbamidomethyl (C))M]S 9 -1 60.73 0.0 0.0 4.5138 0.0 0.0 0.0 178.0511873834594 178.0511873834594 30.0042589230368 0.0 0.0 0.0 0 1.086696871556164 1.154901959985743 1.4447638809191468 0.0 ESEDYY[C(Carbamidomethyl (C))M]S 4.5138 - 2375 + 1 2.112 233101.2 0.5799999833106995 2684 3419 6100 DOHH2_400M_050219_1,6105 DOHH2_400M_050219_1,6105,ESEEEEDDDSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6106 33.44 800.0 123630.0 25 0 4854.5 + -1 FKFELGCKNVI 11 141 677.8639560580053 0 677.8640624880791 PEAK CID FTMS 0 0 0 6100 118413.2421875 1.0 0 0.0 6 Carbamidomethyl (C) _FKFELGC(Carbamidomethyl (C))KNVI_ REV__ENSG00000232040|ENST00000452236|SCAND3 20.41453444215458 0.3478569044516306 1 VNASQ[PS]D 8 -1 57.252 0.0 0.0 4.2292 0.0 0.0 131.09237032810898 421.24509607486567 552.3374664029747 0.0 0.0 0.0 0.0 0 0.4634679910804405 0.0 1.6382104921644451 1.1989700043360187 VNASQ[PS]D 4.2292 - 256 + 1 2.112 76784.4 0.6600000262260437 2685 3419 6100 DOHH2_400M_050219_1,6106 DOHH2_400M_050219_1,6106,FKFELGCKNVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6108 33.446 113.0 757140.0 25 0 143700.0 + 6617 EARPRPLSL 9 94 519.8065404255716 1037.598527917943 2 519.8067504763603 MULTI CID FTMS 0 0 0 6107 339852.65625 0.1680103278456032 4 -0.4284286499023437 1 Unmodified _EARPRPLSL_ ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1 29.84058131909904 0.1515068451768857 1 {I|L}EN 3 8 39.253 0.0 0.0 3.783 0.0 0.0 0.0 678.3947258870353 678.3947258870353 16.73393743112328 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 {I|L}EN 3.783 - 81 + 1 2.117 68814.1 1.0 2686 3420 6107 DOHH2_400M_050219_1,6108 DOHH2_400M_050219_1,6108,EARPRPLSL False True EARPRPLSL 33.446258 519.80675047636 11417882.0 6107.0 nc|ENSG00000148840|Q5VV67-2|PPRC1;;ENSG00000148840|ENST00000278070|PPRC1 5.225961208343506 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6109 33.454 459.0 353180.0 25 0 55606.0 + 15054 ILYPRPKSL 9 148 362.89379726926217 0 362.8938476443291 PEAK CID FTMS 0 0 0 6107 207926.359375 1.0 0 0.0 2 Unmodified _ILYPRPKSL_ nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1-4|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC 53.832793166522166 0.0232989711577274 1 C(Carbamidomethyl (C))NY 3 8 13.812 0.0 0.0 1.9084 0.0 0.0 201.5481403375493 82.06694971256093 283.61509005011027 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))NY 1.9084 - 68 + 1 2.117 130226.9 1.0 2687 3420 6107 DOHH2_400M_050219_1,6109 DOHH2_400M_050219_1,6109,ILYPRPKSL True True ILYPRPKSL 33.454383 362.893847644329 2520181.25 6107.0 nc|ENSG00000153130|Q9UIL1-3|SCOC;;nc|ENSG00000153130|Q9UIL1|SCOC;;nc|ENSG00000153130|Q9UIL1-2|SCOC;;nc|ENSG00000153130|Q9UIL1-4|SCOC 3.940373182296753 3.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6110 33.456 78.0 880780.0 25 0 44656.0 + 13076 HEAEVLKQL 9 106 533.7983300951307 0 533.7980834841728 PEAK CID FTMS 0 0 0 6107 512038.65625 0.7953163847561241 1 -0.1350517272949218 3 Unmodified _HEAEVLKQL_ ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1 69.10491478415734 0.015593057067598 1 QK{I|L}VEAE 7 8 49.559 0.0 0.0 4.6509 0.0 0.0 131.0957245437001 134.03602014713127 265.1317446908314 0.0 0.0 0.0 0.0 0 1.301203852579394 0.0 1.1861818737241734 0.0 QK{I|L}VEAE 4.6509 - 162 + 1 2.117 56685.0 1.0 2688 3420 6107 DOHH2_400M_050219_1,6110 DOHH2_400M_050219_1,6110,HEAEVLKQL True True HEAEVLKQL 33.456182 533.798083484173 2971127.25 6107.0 ENST00000465604.1_1_1:26227509-26228203:-|nuORF;;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;;ENSG00000117632|ENST00000455785|STMN1;;nc|ENSG00000117632|P16949-2|STMN1 6.136306126912435 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6111 33.47 800.0 209400.0 25 0 15136.0 + 43567 YAAQENLEY 9 174 550.7481857970781 1099.4818186609562 2 550.7483398318291 MULTI CID FTMS 0 0 0 6107 171848.125 1.0 0 0.0 4 Unmodified _YAAQENLEY_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 46.020951573049366 0.0490941689151868 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AQEN{I|L}EY 9 0 + 61.053 0.0 0.0 5.5529 5.5529 86.366 0.0 0.0 0.0 17.1539997635891 33.67472750428117 17.1539997635891 9.208187539523747 0 0.3935078169319297 1.2218487496163564 0.0 1.079689690656103 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AQEN{I|L}EY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AQEGG{I|L}EY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[AG]EN{I|L}EY;[Y{M(Oxidation (M))|F}]{I|L}NEQ{[WT]|[RM]};[QA]AYEN{I|L}EY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NA{I|L}AYEY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[AG]EGG{I|L}EY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EY;[QA][HS]NEQAC{I|L};[Y{M(Oxidation (M))|F}]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{M(Oxidation (M))|F}Y 5.5529;4.7154;4.3975;3.4945;3.4521;2.9371;2.8999;2.8577;2.8476;2.8319 +;-;-;-;-;-;-;-;-;- + 2523 1 2.117 126939.7 0.7400000095367432 2689 3420 6107 DOHH2_400M_050219_1,6111 DOHH2_400M_050219_1,6111,YAAQENLEY True True YAAQENLEY 33.470014 550.748339831829 778732.8125 6107.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 5.456785043080648 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6112 33.474 200.0 452930.0 25 0 40055.0 -1 CRCCCYLFHCC 11 122 381.8840082029444 1523.5069269453777 4 381.8837158083916 MULTI CID FTMS 0 0 0 6107 161149.859375 0.7901826977297244 -1 0.0664634704589843 5 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))RC(Carbamidomethyl (C))C(Carbamidomethyl (C))CYLFHCC_ nc|ENSG00000214447|A6NFU0|FAM187A 0.0 0.8751479354844584 1 [VP][R{I|L}]RENT 8 -1 15.934 0.0 0.0 1.0459 0.0 0.0 0.0 554.9606463907553 554.9606463907553 0.4499447439452115 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 [VP][R{I|L}]RENT 1.0459 - 239 1 2.117 72701.6 1.0 2690 3420 6107 DOHH2_400M_050219_1,6112 DOHH2_400M_050219_1,6112,CRCCCYLFHCC False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6113 33.48 318.0 384610.0 25 0 49611.0 + 37080 TGLAGYYLY 9 133 510.75359754254094 1019.492642151882 2 510.7541992068291 MULTI CID FTMS 0 0 0 6107 142647.0 0.0968757425322741 -1 0.0664634704589843 6 Unmodified _TGLAGYYLY_ REV__ENSG00000105641|ENST00000222248|SLC5A5 46.92087301778293 0.0471210510596396 1 {[SA]|[TG]}E{I|L}HTS{I|L}Y 9 -1 + 73.218 0.0 0.0 7.1818 7.1818 94.713 0.0 0.0 0.0 15.261114261756704 23.6107362193508 15.261114261756704 20.059975831763445 0 1.5629529932484498 1.3979400086720375 2.029796601929802 0.0 {[SA]|[TG]}E{I|L}HTS{I|L}Y;[HT]S{I|L}EAS{I|L}Y;[H{I|L}]TSEAS{I|L}Y;[HT]{I|L}SEAS{I|L}Y;[H{I|L}]ESTAS{I|L}Y;[H{I|L}]ESATS{I|L}Y;[DP][{I|L}A]NGAS{I|L}Y;{[ES]|[DT]|[{I|L}C]}A{I|L}HTS{I|L}Y;[H{I|L}]ETSAS{I|L}Y;{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]GAS{I|L}Y 7.1818;5.2141;5.0306;5.0306;5.0027;4.9551;4.9397;4.9218;4.8801;4.8375 -;-;-;-;-;-;-;-;-;- 2521 1 2.117 94756.3 1.0 2691 3420 6107 DOHH2_400M_050219_1,6113 DOHH2_400M_050219_1,6113,TGLAGYYLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6114 33.493 800.0 255540.0 25 0 21958.0 + 710 AEPDESNARYF 11 168 649.7864885184999 1297.5584241037998 2 649.7874023318291 MULTI CID FTMS 0 0 0 6107 135124.84375 0.634100773599439 -1 0.0664634704589843 7 Unmodified _AEPDESNARYF_ ENSG00000177889|ENST00000318066|UBE2N;nc|ENSG00000276380|Q5JXB2|UBE2NL 47.7319792270244 0.130190323903946 1 {[CP]|[EA]}PDESNARY{M(Oxidation (M))|F} 11 0 + 81.749 0.0 0.0 6.3002 6.3002 83.075 0.0 0.0 0.0 11.435425474554933 3.5902194264166667 3.5902194264166667 3.5902194264166667 0 0.7059771852360797 0.5686362358410126 1.274227503252014 0.0 + + {[CP]|[EA]}PDESNARY{M(Oxidation (M))|F};{[CP]|[EA]}PDESNAR{M(Oxidation (M))|F}Y;{[CP]|[EA]}PDESNA[VG]Y{M(Oxidation (M))|F};{[CP]|[EA]}PDESGGARY{M(Oxidation (M))|F};{[CP]|[EA]}PDESNA[VG]{M(Oxidation (M))|F}Y;{[CP]|[EA]}PDESGGAR{M(Oxidation (M))|F}Y;{[CP]|[EA]}PDESGGA[VG]Y{M(Oxidation (M))|F};{[CP]|[EA]}PDESGGA[VG]{M(Oxidation (M))|F}Y;{[CP]|[EA]}QRANSE{[HG]|PP}{[CP]|[EA]};{[CP]|[EA]}PDE[W{I|L}]EY{M(Oxidation (M))|F} 6.3002;6.0235;5.5967;5.5967;5.32;5.32;4.8955;4.6189;4.1045;3.9291 +;-;-;-;-;-;-;-;-;- + 2025 + 1 2.117 154002.2 0.7099999785423279 2692 3420 6107 DOHH2_400M_050219_1,6114 DOHH2_400M_050219_1,6114,AEPDESNARYF False True AEPDESNARYF 33.493441 649.787402331829 2110355.5 6107.0 ENSG00000177889|ENST00000318066|UBE2N;;nc|ENSG00000276380|Q5JXB2|UBE2NL 7.782939592997233 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6115 33.499 297.0 255290.0 25 0 25803.0 + 17745 KPYTKYVL 8 125 506.2978787666626 1010.5812046001251 2 506.2975646853447 MULTI CID FTMS 0 0 0 6107 89570.015625 0.5418843230762381 -1 0.0664634704589843 8 Unmodified _KPYTKYVL_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 24.020572477871973 0.5389365498350341 1 [Q{I|L}]AV 4 7 18.416 0.0 0.0 1.8224 0.0 0.0 0.0 596.3223360650999 596.3223360650999 -0.7798424426552835 0.0 -0.7798424426552835 0.0 0 0.0 1.3010299956639813 0.0 0.0 [Q{I|L}]AV 1.8224 - 564 + 1 2.117 62178.7 1.0 2693 3420 6107 DOHH2_400M_050219_1,6115 DOHH2_400M_050219_1,6115,KPYTKYVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6116 33.513 800.0 272590.0 25 0 27867.0 28973 QDLPDCCFWAS 11 162 642.7525366584048 1283.4905203836097 2 642.7522460818291 MULTI CID FTMS 0 0 0 6107 83983.984375 0.1413304922310201 -1 0.0664634704589843 9 Unmodified _QDLPDCCFWAS_ ENST00000421852.5_1_3:185207567-185207957:-|nuORF 39.94969957227396 0.2131707853268865 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GTNT 7 8 53.537 0.0 0.0 4.1712 0.0 0.0 0.0 551.1393573084057 551.1393573084057 24.749995697224453 0.0 0.0 0.0 0 1.610924374808178 0.0 1.024227503252014 0.75 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GTNT 4.1712 - 794 + 1 2.117 162688.3 0.6000000238418579 2694 3420 6107 DOHH2_400M_050219_1,6116 DOHH2_400M_050219_1,6116,QDLPDCCFWAS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6117 33.52 341.0 620050.0 25 0 73739.0 + 8380 ESEAENEDMNY 11 163 665.7395250366154 1329.4644971400307 2 665.7399169802666 MULTI CID FTMS 0 0 0 6107 245156.515625 0.5551637568545312 -1 0.0664634704589843 10 Unmodified _ESEAENEDMNY_ REV__ENSG00000135052|ENST00000388712|GOLM1;REV__nc|ENSG00000135052|Q8NBJ4-2|GOLM1 28.49450938151212 0.4231428536161201 1 ESEDPD{M(Oxidation (M))|F}[NS]QY 11 -1 + 58.462 0.0 0.0 4.3974 4.3974 84.805 0.0 0.0 0.0 38.02827059852988 13.31897492334366 13.31897492334366 14.128498242810991 0 1.2887254899964358 1.3010299956639813 0.0 1.110924374808178 ESEDPD{M(Oxidation (M))|F}[NS]QY;ESEDPD{M(Oxidation (M))|F}[NS][AG]Y;ESEDPD{M(Oxidation (M))|F}[NS]YQ;ESH{[CT]|[{M(Oxidation (M))|F}G]}D{M(Oxidation (M))|F}[NS]QY;ESEDPDY{M(Oxidation (M))|F}NSQ;{[MG]|[TS]}{[C(Carbamidomethyl (C))E]|[WC]}E[HN]YQY;{[MG]|[TS]}{[C(Carbamidomethyl (C))E]|[WC]}{[C(Carbamidomethyl (C))G]|[NC]}YYQY;ESEDPD{M(Oxidation (M))|F}YNSQ;ESEDYE{[DS]|[MA]|[CV]|TT}[DN]Q;ESEDYE[QA][EC]Q 4.3974;3.3347;3.2268;3.0969;3.0801;2.8809;2.713;2.4262;2.3342;2.3342 -;-;-;-;-;-;-;-;-;- 2361 + 1 2.117 161562.1 1.0 2695 3420 6107 DOHH2_400M_050219_1,6117 DOHH2_400M_050219_1,6117,ESEAENEDMNY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6118 33.528 422.0 373870.0 25 0 84129.0 + 22643 LPYQDHNKIY 10 106 430.8881865024208 0 430.8882629275322 PEAK CID FTMS 0 0 0 6107 200306.203125 0.4714283381761063 200 -19.798805236816406 11 Unmodified _LPYQDHNKIY_ REV__ENSG00000156795|ENST00000287387|NTAQ1;REV__ENST00000517609.5_1_8:124429070-124447771:+|nuORF;REV__ENST00000519199.5_2_8:124429089-124447771:+|nuORF;REV__ENST00000523551.1_1_8:124429070-124460295:+|nuORF 3.944395688203298 0.3961065659209837 1 P{I|L} 2 -1 9.464 0.0 0.0 1.1008 0.0 0.0 174.36021283623967 472.24145936363067 646.6016721998703 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L} 1.1008 - 15 + 1 2.117 127419.5 1.0 2696 3420 6107 DOHH2_400M_050219_1,6118 DOHH2_400M_050219_1,6118,LPYQDHNKIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6119 33.541 800.0 32210.0 25 0 7612.7 -1 0 28 1146.460742175579 0 1146.460742175579 PEAK CID FTMS 0 0 0 -1 0 12 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.117 26129.0 0.4900000095367431 2697 3420 6107 DOHH2_400M_050219_1,6119 DOHH2_400M_050219_1,6119, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6120 33.555 800.0 151030.0 25 0 12198.0 -1 0 68 714.9097135057648 2855.609748156659 4 715.1605102419853 MULTI CID FTMS 0 0 0 6107 100751.71875 1.0 0 0.0 13 1 VQE 3 -1 33.188 0.0 0.0 1.1622 0.0 0.0 0.0 2496.4247536293046 2496.4247536293046 26.197887582883936 0.0 0.0 0.0 0 0.5 0.0 0.0 0.5 VQE 1.1622 - 26 + 1 2.117 93864.0 0.6399999856948853 2698 3420 6107 DOHH2_400M_050219_1,6120 DOHH2_400M_050219_1,6120, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6121 33.57 800.0 106480.0 25 0 13693.0 -1 TCAEGECCESC 11 132 681.7069932884252 0 681.7069579958916 PEAK CID FTMS 0 0 0 6107 97445.875 1.0 0 0.0 14 4 Carbamidomethyl (C) _TC(Carbamidomethyl (C))AEGEC(Carbamidomethyl (C))C(Carbamidomethyl (C))ESC(Carbamidomethyl (C))_ ENSG00000069206|ENST00000175238|ADAM7 0.3070304955306653 0.4761840153648598 1 YY 2 -1 8.5835 0.0 0.0 0.63049 0.0 0.0 327.13742300087534 705.1108126197628 1032.248235620638 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YY 0.63049 - 36 + 1 2.117 69302.3 0.6299999952316284 2699 3420 6107 DOHH2_400M_050219_1,6121 DOHH2_400M_050219_1,6121,TCAEGECCESC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6122 33.575 257.0 205410.0 25 0 10211.0 + 19969 LIHWYQLT 8 97 537.2934537301692 0 537.2933837771416 PEAK CID FTMS 0 0 0 6107 94184.8984375 1.0 0 0.0 15 Unmodified _LIHWYQLT_ REV__ENSG00000134343|ENST00000256737|ANO3;REV__nc|ENSG00000134343|Q9BYT9-2|ANO3 10.183394434864962 0.5394990767616434 1 S 1 -1 6.9897 0.0 0.0 0.65168 0.0 0.0 135.08451380623825 847.4284151666624 982.5129289729008 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.65168 - 27 + 1 2.117 45380.3 1.0 2700 3420 6107 DOHH2_400M_050219_1,6122 DOHH2_400M_050219_1,6122,LIHWYQLT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6124 33.58 5.6 10447000.0 25 0 1973900.0 + 8386 ESEDPDYYQY 10 75 654.7489179283465 1307.4832829234929 2 654.7494994997978 MULTI CID FTMS 0 0 0 6123 9425420.0 1.0 0 0.0 1 Unmodified _ESEDPDYYQY_ ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I 37.97399986684836 0.1789611706409123 1 [DP]DD{[ET]|[MV]}YY[YQ] 10 5 + 49.24 0.0 0.0 3.766 3.766 72.525 0.0 0.0 0.0 11.44026668739822 7.269987279362624 7.269987279362624 2.455678082598922 0 0.3494850021680094 0.8860566476931632 1.5 0.0 [DP]DD{[ET]|[MV]}YY[YQ];[DP]DQ{[C(Carbamidomethyl (C))G]|[NC]}YY[YQ];[DP]NE{[C(Carbamidomethyl (C))G]|[NC]}YY[YQ];[DP]Y[C(Carbamidomethyl (C))H]YY[YQ];YYE{[C(Carbamidomethyl (C))G]|[NC]}YY[YQ];[DP]N[WC(Carbamidomethyl (C))]YY[YQ];[DP]YED{[ES]|[DT]|[{I|L}C]}Y[YQ];[DP]YY[C(Carbamidomethyl (C))H]Y[YQ];[YE]Y{[C(Carbamidomethyl (C))G]|[NC]}YY[YQ];[DP]D[AG]{[C(Carbamidomethyl (C))G]|[NC]}YY[YQ] 3.766;3.5782;3.3088;3.2293;2.891;2.7483;2.7134;2.6742;2.6658;2.5861 -;-;-;-;-;-;-;-;-;- 635 1 2.117 49743.5 1.0 2701 3421 6123 DOHH2_400M_050219_1,6124 DOHH2_400M_050219_1,6124,ESEDPDYYQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6125 33.581 45.0 729010.0 25 0 65407.0 + 7037 EELEKLQQY 9 70 590.2981238928029 1178.5816948524057 2 590.2985717654228 MULTI CID FTMS 0 0 0 6123 535786.1875 0.1675697660444642 2 -0.2082061767578125 2 Unmodified _EELEKLQQY_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 26.88365393820708 0.1891292719743517 1 QY 2 7 19.196 0.0 0.0 1.6287 0.0 0.0 869.4496585748651 0.0 869.4496585748651 0.0 2.998037644757048 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + QY 1.6287 + + 49 + 1 2.117 31508.7 1.0 2702 3421 6123 DOHH2_400M_050219_1,6125 DOHH2_400M_050219_1,6125,EELEKLQQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6126 33.583 94.0 1027400.0 25 0 191310.0 30050 QVAANATK 8 61 401.7235857513994 801.432618569599 2 401.7233459353447 MULTI CID FTMS 0 0 0 6123 633152.6875 0.3484879757641855 -1 0.1350517272949218 3 Unmodified _QVAANATK_ ENSG00000161031|ENST00000340880|PGLYRP2;nc|ENSG00000161031|Q96PD5-2|PGLYRP2 0.6903765706972694 0.8201419426409876 1 V 1 7 7.232 0.0 0.0 0.90238 0.0 0.0 59.04950557834247 640.2930855637262 699.3425911420687 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + V 0.90238 + + 1 + 1 2.117 80329.2 1.0 2703 3421 6123 DOHH2_400M_050219_1,6126 DOHH2_400M_050219_1,6126,QVAANATK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6127 33.585 74.0 2661200.0 25 0 547090.0 + 1806 ALSVDVEGKM 10 140 350.1818460295656 1047.5237086888967 3 350.1820861697197 MULTI CID FTMS 0 0 0 6123 470376.78125 1.0 0 0.0 4 Unmodified _ALSVDVEGKM_ REV__ENSG00000124942|ENST00000378024|AHNAK 9.5439744041441 0.6824900257974675 1 [KG]DMGH{I|L}KY 9 -1 + 46.687 0.0 0.0 4.4569 4.4569 85.711 0.0 0.0 0.0 -6.181517896108616 8.649251201244198 -6.181517896108616 18.83063053036616 0 0.1271595765414318 0.0 0.0 0.5114393726401688 [KG]DMGH{I|L}KY;[H{I|L}]GMK{[CT]|[{M(Oxidation (M))|F}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[H{I|L}]GKM{[CT]|[{M(Oxidation (M))|F}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[KG]YD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KY;[KG]DY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KY;{[HG]|PP}{I|L}MK{[CT]|[{M(Oxidation (M))|F}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[H{I|L}]KGM{[CT]|[{M(Oxidation (M))|F}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[HG]|PP}M{I|L}K{[CT]|[{M(Oxidation (M))|F}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[K{I|L}][DP]MDA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[MD][{I|L}V][Q{I|L}]A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4.4569;2.6592;2.0845;1.9997;1.9779;1.3735;1.3416;1.0862;1.0622;0.84739 -;-;-;-;-;-;-;-;-;- 1177 + 1 2.117 159190.0 1.0 2704 3421 6123 DOHH2_400M_050219_1,6127 DOHH2_400M_050219_1,6127,ALSVDVEGKM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6128 33.591 358.0 311850.0 25 0 27395.0 + 18443 KYFDEHYEY 9 130 647.2745931728801 1292.5346334125602 2 647.2756835818291 MULTI CID FTMS 0 0 0 6123 252485.9375 0.0039993872043147 12 -1.3557662963867188 5 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 121.5340881639634 0.0009571029376058 1 [YE]HAYRYEY 9 5 + 83.659 0.0 0.0 6.4725 6.4725 81.473 0.0 0.0 0.0 5.694765492042095 5.694765492042095 5.694765492042095 2.218487496163561 0 0.6421590589602533 1.5228787452803376 0.91944517631652 0.7742275032520141 [YE]HAYRYEY;[YE]HD{M(Oxidation (M))|F}KYEY;KY{M(Oxidation (M))|F}DEHYEY;KY{M(Oxidation (M))|F}DE[QA]TEY;[YE]HD{M(Oxidation (M))|F}YKEY;[YE]HD{M(Oxidation (M))|F}YEKY;[YE]HAYYREY;[YE]HD{M(Oxidation (M))|F}EYKY;KY{M(Oxidation (M))|F}YY{[MS]|[{M(Oxidation (M))|F}A]}EY;{[YC]|[HE]}YAYRYEY 6.4725;6.3008;6.0319;5.692;5.5612;5.4952;5.3637;5.359;5.3484;5.2548 -;-;+;-;-;-;-;-;-;- + 2251 1 2.117 93065.4 1.0 2705 3421 6123 DOHH2_400M_050219_1,6128 DOHH2_400M_050219_1,6128,KYFDEHYEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6129 33.599 451.0 420440.0 25 0 73996.0 30387 RAPAGPKP 8 181 397.2377032782194 792.4608536232389 2 397.2372009158134 MULTI CID FTMS 0 0 0 6123 230852.4375 0.3760291674039011 -1 0.1350517272949218 6 Unmodified _RAPAGPKP_ ENST00000395738.2_1_22:50921135-50921831:+|nuORF 9.347437153973935 0.7675937258251505 1 {I|L}{I|L}HR 4 8 47.849 0.0 0.0 6.0381 0.0 0.0 255.12159465563087 0.0 255.12159465563087 0.0 32.21462831791278 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.7416440611282626 {I|L}{I|L}HR 6.0381 - 70 + 1 2.117 145675.0 1.0 2706 3421 6123 DOHH2_400M_050219_1,6129 DOHH2_400M_050219_1,6129,RAPAGPKP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6130 33.604 245.0 246040.0 25 0 14506.0 + 35205 SSDNIMVQY 9 106 536.7346930270103 1071.4548331208205 2 536.7347289919853 MULTI CID FTMS 0 0 0 6123 218658.75 1.0 0 0.0 7 Oxidation (M) _SSDNIM(Oxidation (M))VQY_ ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2 65.23502041540118 0.0231836506122253 1 [DN]SS{I|L}{M(Oxidation (M))|F}VQY 9 4 + 44.9 0.0 0.0 4.1906 4.1906 76.017 0.0 0.0 0.0 4.0500233001784025 9.577570906191896 4.0500233001784025 4.0500233001784025 0 0.7429928190999391 0.0 0.6747425010840047 1.305462187404089 [DN]SS{I|L}{M(Oxidation (M))|F}VQY;{[QV]|[N{I|L}]|[RA]|[KV]}DSS{M(Oxidation (M))|F}VQY;{[CA]|SS}[DN]{I|L}{M(Oxidation (M))|F}VQY;[AG]VDSS{M(Oxidation (M))|F}VQY;[DN]S{I|L}S{M(Oxidation (M))|F}VQY;{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}VQY;[DN]{I|L}SS{M(Oxidation (M))|F}VQY;[DN]SS{M(Oxidation (M))|F}{I|L}VQY;[AG]V{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}VQY;[AG]V{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}VQY 4.1906;3.8126;3.6935;3.5555;3.493;3.3246;3.2859;3.2733;3.0624;3.0624 -;-;+;-;-;-;-;-;-;- + 287 1 2.117 52215.7 1.0 2707 3421 6123 DOHH2_400M_050219_1,6130 DOHH2_400M_050219_1,6130,SSDNIMVQY True False SSDNIMVQY 33.603904 536.7364 718052.6875 6123.0 ENSG00000158623|ENST00000425248|COPG2;;nc|ENSG00000158623|Q9UBF2-2|COPG2;;ENSG00000181789|ENST00000314797|COPG1 6.677905877431233 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6131 33.609 255.0 245850.0 25 0 19062.0 + 728 AEPYRPIQY 9 97 568.7907493097405 1135.5669456862809 2 568.7908813357353 MULTI CID FTMS 0 0 0 6123 201728.828125 0.3225453749453874 1 -0.1264762878417968 8 Unmodified _AEPYRPIQY_ ENSG00000144283|ENST00000389759|PKP4;nc|ENSG00000144283|Q99569-2|PKP4 48.345845343767074 0.0439967357579942 1 {[CP]|[EA]}PYR[{I|L}P]QY 9 0 + 36.353 0.0 0.0 3.2013 3.2013 81.222 0.0 0.0 0.0 19.67084689121528 7.853350071374628 7.853350071374628 14.208187539523752 0 0.3807196863200844 0.0 0.0 1.3494850021680094 + + {[CP]|[EA]}PYR[{I|L}P]QY;{[CP]|[EA]}PYR[{I|L}P][AG]Y 3.2013;1.9501 +;- + 183 + 1 2.117 52359.1 1.0 2708 3421 6123 DOHH2_400M_050219_1,6131 DOHH2_400M_050219_1,6131,AEPYRPIQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6132 33.617 442.0 445580.0 25 0 117700.0 + 8331 ERPIRQIL 8 122 512.8168788493894 0 512.8170654177666 PEAK CID FTMS 0 0 0 6123 196431.140625 0.8024908534337565 -1 0.1350517272949218 9 Unmodified _ERPIRQIL_ ENSG00000178982|ENST00000248342|EIF3K;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K 78.14939416004806 1.4098980338845627e-05 1 R{I|L} 2 6 16.083 0.0 0.0 1.5712 0.0 0.0 129.04193168805062 622.3661593072874 751.408090995338 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3252574989159953 R{I|L} 1.5712 - 83 + 1 2.117 152144.5 1.0 2709 3421 6123 DOHH2_400M_050219_1,6132 DOHH2_400M_050219_1,6132,ERPIRQIL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6133 33.623 381.0 327030.0 25 0 22724.0 + -1 GTDNPLSGGDQY 12 138 612.2623717384822 1222.5101905437643 2 612.2626220583916 MULTI CID FTMS 0 0 0 6123 180206.296875 0.0663579021601283 -3 0.2224807739257812 10 Carbamidomethyl (C) _EGSNC(Carbamidomethyl (C))SEDKVV_ ENST00000429133.5_1_2:216974075-216982480:+|nuORF;ENST00000476360.1_1_2:216974075-216981630:+|nuORF;ENSG00000079246|ENST00000392132|XRCC5 27.628801355627647 0.4434699450731472 1 [DN]SAP{I|L}S[DN]QY 11 -1 + 76.267 0.0 0.0 6.2386 6.2386 86.46 0.0 0.0 0.0 9.423195118548549 10.283773187068787 9.423195118548549 7.40362689494242 0 1.6961126388908232 1.0969100130080565 1.066901560044258 1.4436726795685342 [DN]SAP{I|L}S[DN]QY;[DN]ASP{I|L}S[DN]QY;{[SA]|[TG]}DNP{I|L}S[DN]QY;[DN]SAP{I|L}GE{M(Oxidation (M))|F}HH;[DN]SAP{I|L}[W{M(Oxidation (M))|F}]HH;[NS]DAP{I|L}S[DN]QY;[DN]ASP{I|L}GE{M(Oxidation (M))|F}HH;{[SA]|[TG]}DNP{I|L}GE{M(Oxidation (M))|F}HH;[DN]ASP{I|L}[W{M(Oxidation (M))|F}]HH;[DN]S[{I|L}P]AS[DN]QY 6.2386;5.633;5.4678;5.3974;5.0777;4.8942;4.7918;4.6266;4.4721;4.4668 -;-;-;-;-;-;-;-;-;- 4781 1 2.117 93386.9 1.0 2710 3421 6123 DOHH2_400M_050219_1,6133 DOHH2_400M_050219_1,6133,EGSNCSEDKVV False False GTDNPLSGGDQY 33.623371 612.262622058392 73886502.0 6123.0 ENST00000429133.5_1_2:216974075-216982480:+|nuORF;;ENST00000476360.1_1_2:216974075-216981630:+|nuORF;;ENSG00000079246|ENST00000392132|XRCC5 7.590265274047852 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6134 33.631 424.0 299140.0 25 0 35269.0 + -1 NLPMHKMI 8 130 492.2619843743586 491.2547079077586 1 492.2616149783134 MULTI CID FTMS 0 0 0 6123 177004.609375 0.4851824894798489 -5 0.3426742553710937 11 ENSG00000174444|ENST00000307961|RPL4;ENST00000567229.5_1_15:66791747-66793486:-|nuORF 1 {I|L} 1 -1 12.474 0.0 0.0 2.5393 0.0 0.0 360.159536864593 0.0 360.159536864593 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.5393 - 77 + 1 2.117 99756.3 1.0 2711 3421 6123 DOHH2_400M_050219_1,6134 DOHH2_400M_050219_1,6134, False False NLPMHKMI 33.630925 492.261614978313 1159403.25 6123.0 ENSG00000174444|ENST00000307961|RPL4;;ENST00000567229.5_1_15:66791747-66793486:-|nuORF 5.801661491394043 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6135 33.64 499.0 156060.0 25 0 12278.0 -1 0 81 954.4317997307604 1906.8490465283207 2 954.4328491091728 MULTI CID FTMS 0 0 0 6123 154620.90625 0.9305214217419792 -1 0.1350517272949218 12 1 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 75.9 0.0 0.0 3.9804 3.9804 79.303 0.0 0.0 0.0 3.4336777395950406 50.327147883911536 3.4336777395950406 9.013902021140495 0 0.9247425010840048 0.0 0.0 0.7302046884880937 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[WR][KG]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[QT][YT]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[YQ][HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.9804;3.5077;3.5077;3.5077;3.5077;3.3064;3.0095;2.9971;2.974;2.9305 -;-;-;-;-;-;-;-;-;- 678 1 2.117 54740.3 1.0 2712 3421 6123 DOHH2_400M_050219_1,6135 DOHH2_400M_050219_1,6135, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6136 33.655 800.0 195720.0 25 0 22270.0 3551 CYGRYWSYGFY 11 137 732.8053577926075 1463.596162652015 2 733.3061401247978 MULTI CID FTMS 0 0 0 6123 148604.0 1.0 0 0.0 13 Unmodified _CYGRYWSYGFY_ ENSG00000244624|ENST00000334664|KRTAP20-1 17.11289562659939 0.6791789249425932 1 HDEAQQDA{M(Oxidation (M))|F}Y 10 9 75.068 0.0 0.0 5.129 0.0 0.0 241.10632521797032 0.0 241.10632521797032 0.0 49.47305377789797 0.0 0.0 0 1.1549471895720984 0.0 0.7302046884880937 0.7059771852360797 HDEAQQDA{M(Oxidation (M))|F}Y 5.129 - 1398 1 2.117 109842.9 0.7099999785423279 2713 3421 6123 DOHH2_400M_050219_1,6136 DOHH2_400M_050219_1,6136,CYGRYWSYGFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6137 33.659 224.0 425270.0 25 0 37727.0 -1 SEWTCGLLSGM 11 115 620.7682108355375 1239.521868737875 2 621.2745849490166 MULTI CID FTMS 0 0 0 6123 144014.859375 0.5541665343922979 -5 0.3426742553710937 14 Carbamidomethyl (C) _SEWTC(Carbamidomethyl (C))GLLSGM_ ENST00000595233.1_1_19:49862643-49863107:-|nuORF 12.240655878213236 0.7805268987462184 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QS]|[NT]}[{I|L}P]GDSM 10 -1 41.514 0.0 0.0 3.3492 0.0 0.0 0.0 177.02117140373335 177.02117140373335 15.558481052291668 0.0 0.0 0.0 0 0.0 2.0 1.360924374808178 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QS]|[NT]}[{I|L}P]GDSM 3.3492 - 423 1 2.117 73355.3 1.0 2714 3421 6123 DOHH2_400M_050219_1,6137 DOHH2_400M_050219_1,6137,SEWTCGLLSGM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6138 33.673 800.0 147250.0 25 0 9519.0 + 35214 SSDPASQLSY 10 161 527.7379976938034 1053.4614424544068 2 527.7387573122978 MULTI CID FTMS 0 0 0 6123 103086.390625 0.018205505592221 8 -0.8594589233398438 15 Unmodified _SSDPASQLSY_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000536066.1_1_12:2967806-2973707:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 49.55428908609986 0.0827668555218455 1 [PA]SQ{[C(Carbamidomethyl (C))E]|[WC]}{I|L}SY 9 5 [PA]SQ{[C(Carbamidomethyl (C))E]|[WC]}{I|L} + + 28.583 8.5744 1.0918 2.7133 2.7133 49.881 0.0 0.0 0.0 0.0 10.798990326274236 0.0 0.0 0 0.5 0.0 0.2614393726401688 0.0 [PA]SQ{[C(Carbamidomethyl (C))E]|[WC]}{I|L}SY 2.7133 - 898 + 1 2.117 92506.1 0.550000011920929 2715 3421 6123 DOHH2_400M_050219_1,6138 DOHH2_400M_050219_1,6138,SSDPASQLSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6139 33.688 800.0 104270.0 25 0 7315.7 + 25508 NEMQPNGKVF 10 123 582.2800170779228 0 582.2800170779228 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _NEMQPNGKVF_ ENSG00000068366|ENST00000672401|ACSL4;nc|ENSG00000068366|O60488|ACSL4 16.149105407346934 0.3281668441439271 1 M 1 9 5.4846 0.0 0.0 0.47177 0.0 0.0 788.4192738025268 240.06316553287343 1028.4824393354004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 0.47177 + + 17 + 1 2.117 70270.0 0.7400000095367432 2716 3421 6123 DOHH2_400M_050219_1,6139 DOHH2_400M_050219_1,6139,NEMQPNGKVF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6140 33.702 800.0 165030.0 25 0 8385.3 -1 0 78 874.2248336960606 4366.087786147303 5 874.6255981326103 MULTI CID FTMS 0 0 0 6123 158664.140625 1.0 0 0.0 17 1 YAE[WC(Carbamidomethyl (C))] 5 -1 22.218 0.0 0.0 0.50889 0.0 0.0 3638.8263020746367 0.0 3638.8263020746367 0.0 7.516077392713534 0.0 0.0 0 0.0 0.0 0.0 0.0 YAE[WC(Carbamidomethyl (C))] 0.50889 - 80 1 2.117 100197.0 0.6200000047683716 2717 3421 6123 DOHH2_400M_050219_1,6140 DOHH2_400M_050219_1,6140, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6142 33.708 99.0 502580.0 25 0 99463.0 + 14006 IADMGHLKY 9 81 524.2680121891319 1046.5214714450638 2 524.2684814333916 MULTI CID FTMS 0 0 0 6141 404157.3125 0.5029601184358491 1 -0.0817298889160156 1 Unmodified _IADMGHLKY_ ENSG00000132646|ENST00000379143|PCNA 39.94969957227396 0.0757326808254658 1 {I|L}ADM{[HG]|PP}{I|L}KY 9 0 + 70.569 0.0 0.0 6.7432 6.7432 95.643 0.0 0.0 0.0 33.95119965945284 11.76863094705837 11.76863094705837 70.56864994446123 0 1.424742501084005 2.0 0.0 0.0 + + {I|L}ADM{[HG]|PP}{I|L}KY 6.7432 + + 478 + 1 2.114 47337.7 1.0 2718 3422 6141 DOHH2_400M_050219_1,6142 DOHH2_400M_050219_1,6142,IADMGHLKY True True IADMGHLKY 33.707548 524.268481433392 4648015.5 6141.0 ENSG00000132646|ENST00000379143|PCNA;;chr20:5115356-5115449|41|12.51|0.78|4.01|-|2|None,PCNA|1 7.035352865854899 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6143 33.71 143.0 739480.0 25 0 164380.0 9232 FGRQILQSI 9 104 354.5417105813806 1060.6033023443415 3 354.5414611697197 MULTI CID FTMS 0 0 0 6141 112972.9375 0.0921975834978206 2 -0.166900634765625 2 Unmodified _FGRQILQSI_ CON__REFSEQ:XP_585019 4.75600775471527 0.7486543447549536 1 W 1 9 12.764 0.0 0.0 1.2035 0.0 0.0 856.5137465355511 0.0 856.5137465355511 0.0 0.2899597348884342 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.2035 - 24 + 1 2.114 89660.3 1.0 2719 3422 6141 DOHH2_400M_050219_1,6143 DOHH2_400M_050219_1,6143,FGRQILQSI False False False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 6144 33.712 89.0 699290.0 25 0 40100.0 + 38619 TTEVHPELY 9 102 544.7669538090488 1087.5193546848975 2 544.7667724490166 MULTI CID FTMS 0 0 0 6141 507702.15625 0.3928957569257063 -1 0.1264762878417968 3 Unmodified _TTEVHPELY_ ENSG00000125991|ENST00000348547|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3 78.14939416004806 0.0179651292570206 1 TTEVH[EP]{I|L}Y 9 0 + 85.189 0.0 0.0 7.8333 7.8333 97.365 0.0 0.0 0.0 46.71857743895164 16.478174818886373 16.478174818886373 45.58456087046255 0 1.907696035647464 1.6989700043360187 0.6549471895720985 0.0 + + TTEVH[EP]{I|L}Y;[HV]ETT[EP]{I|L}Y;[HV]EPETT{I|L}Y;[EP]HVETT{I|L}Y;[HV]EPE{I|L}TTY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EVETT{I|L}Y;[EP]HVE{I|L}TTY;[HV]EP{I|L}ETTY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EVE{I|L}TTY;[HV]ET[EP]T{I|L}Y 7.8333;3.6417;3.4588;3.2593;3.1573;3.1444;2.9579;2.9533;2.843;2.8161 +;-;-;-;-;-;-;-;-;- + 854 + 1 2.114 53930.5 1.0 2720 3422 6141 DOHH2_400M_050219_1,6144 DOHH2_400M_050219_1,6144,TTEVHPELY True True TTEVHPELY 33.712408 544.766772449017 6622794.5 6141.0 nc|ENSG00000125991|Q9Y282-2|ERGIC3;;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;;nc|ENSG00000125991|Q9Y282-3|ERGIC3;;ENSG00000125991|ENST00000348547|ERGIC3 8.26550563176473 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6145 33.716 211.0 495480.0 25 0 75970.0 -1 0 94 406.7895464943666 811.5645400555333 2 406.7893554568291 MULTI CID FTMS 0 0 0 6141 330923.5625 0.4508587539254889 -1 0.1264762878417968 4 1 {I|L}G{I|L}K 4 -1 33.8 0.0 0.0 4.1648 0.0 0.0 0.0 397.2567843072876 397.2567843072876 22.830918867322296 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}G{I|L}K 4.1648 - 33 + 1 2.114 83813.0 1.0 2721 3422 6141 DOHH2_400M_050219_1,6145 DOHH2_400M_050219_1,6145, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6146 33.719 138.0 679710.0 25 0 44679.0 + 24473 MIEPRTLQY 9 118 583.7972748355331 1165.5799967378662 2 583.7972289919853 MULTI CID FTMS 0 0 0 6141 280442.625 0.0856224337591771 -2 0.2615280151367187 5 Oxidation (M) _M(Oxidation (M))IEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 55.50274090549119 0.0285720310785888 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EK{[QN]|[E{I|L}]|[KN]}PQY 9 4 + 59.447 0.0 0.0 5.1002 5.1002 84.694 0.0 0.0 0.0 11.575994759290964 11.575994759290964 11.575994759290964 9.208187539523747 0 1.805462187404089 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EK{[QN]|[E{I|L}]|[KN]}PQY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EK{[QN]|[E{I|L}]|[KN]}P[AG]Y;{M(Oxidation (M))|F}{I|L}E[NP]KKQY;[YE]PK{[QN]|[E{I|L}]|[KN]}PQY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EK{[QN]|[E{I|L}]|[KN]}E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YE]PK{[QN]|[E{I|L}]|[KN]}P[AG]Y;{M(Oxidation (M))|F}{I|L}E[NP]KKYQ;[YE]PK{[QN]|[E{I|L}]|[KN]}E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[DP]PKK[NP]AHY;{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{[QN]|[E{I|L}]|[KN]}PQY 5.1002;4.3102;4.107;3.4871;2.9076;2.6971;2.5146;1.2945;1.2367;1.0687 -;-;-;-;-;-;-;-;-;- 493 1 2.114 72576.6 1.0 2722 3422 6141 DOHH2_400M_050219_1,6146 DOHH2_400M_050219_1,6146,MIEPRTLQY True False MIEPRTLQY 33.7192 583.797228991985 55386072.0 6141.0 ENSG00000105193|ENST00000251453|RPS16;;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 7.909498532613118 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6147 33.723 198.0 384790.0 25 0 24993.0 + 11204 GENPNPNDW 9 118 521.7149716231795 1041.415390313159 2 521.7154418826103 MULTI CID FTMS 0 0 0 6141 266455.03125 0.7253466628635119 -1 0.1264762878417968 6 Unmodified _GENPNPNDW_ ENSG00000048028|ENST00000696973|USP28;nc|ENSG00000048028|Q96RU2-2|USP28;nc|ENSG00000048028|Q96RU2-3|USP28;nc|ENSG00000048028|Q96RU2|USP28 32.78568957990786 0.1150597335874693 1 [NP]DA 4 6 34.4 0.0 0.0 3.3032 0.0 0.0 0.0 641.232534438412 641.232534438412 2.3625741211018294 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3054621874040891 0.4690370897582285 [NP]DA 3.3032 - 290 1 2.114 65950.9 1.0 2723 3422 6141 DOHH2_400M_050219_1,6147 DOHH2_400M_050219_1,6147,GENPNPNDW True True GENPNPNDW 33.722991 521.71544188261 2738178.5 6141.0 nc|ENSG00000048028|Q96RU2|USP28;;nc|ENSG00000048028|Q96RU2-2|USP28;;nc|ENSG00000048028|Q96RU2-3|USP28;;ENSG00000048028|ENST00000696973|USP28 6.512666861216228 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6148 33.726 162.0 528210.0 25 0 54667.0 + 44327 YLPNKQVL 8 97 487.7874454507109 973.5603379682218 2 487.7875244021416 MULTI CID FTMS 0 0 0 6141 242742.6875 0.8194386233269598 -1 0.1264762878417968 7 Unmodified _YLPNKQVL_ ENSG00000131979|ENST00000491895|GCH1;nc|ENSG00000131979|P30793-2|GCH1;nc|ENSG00000131979|P30793-4|GCH1;nc|ENSG00000131979|P30793-3|GCH1 26.34127834903884 0.4900704351052977 1 [Y{I|L}]PN 4 4 36.727 0.0 0.0 3.7724 0.0 0.0 0.0 483.2951754205688 483.2951754205688 18.3103844862778 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + [Y{I|L}]PN 3.7724 + + 108 + 1 2.114 70242.2 1.0 2724 3422 6141 DOHH2_400M_050219_1,6148 DOHH2_400M_050219_1,6148,YLPNKQVL False False YLPNKQVL 33.726179 487.787524402142 2561220.25 6141.0 ENSG00000131979|ENST00000491895|GCH1;;nc|ENSG00000131979|P30793-2|GCH1;;nc|ENSG00000131979|P30793-4|GCH1;;nc|ENSG00000131979|P30793-3|GCH1 -0.1831577916940053 2.0 True 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6149 33.733 360.0 179510.0 25 0 21646.0 + 18204 KVDDDFTAQDY 11 106 658.7860246411008 1315.5574963490014 2 659.2882568240166 MULTI CID FTMS 0 0 0 6141 224814.75 1.0 0 0.0 8 Unmodified _KVDDDFTAQDY_ ENSG00000176390|ENST00000324238|CRLF3;nc|ENSG00000176390|Q8IUI8-2|CRLF3 44.391923383255 0.1486875248750151 1 {[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}T]D{M(Oxidation (M))|F}TAQDY 11 3 + 53.97 0.0 0.0 4.1025 4.1025 78.224 0.0 0.0 0.0 4.272953334926548 33.51274818410506 4.272953334926548 6.77770794406694 0 0.8182503180159344 0.0 1.392159058960253 0.2614393726401688 {[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}T]D{M(Oxidation (M))|F}TAQDY;{[QV]|[N{I|L}]|[RA]|[KV]}DDD{M(Oxidation (M))|F}TAQDY;[{I|L}T]QDD{M(Oxidation (M))|F}TAQDY;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}T]D{M(Oxidation (M))|F}TA[AG]DY;{[QV]|[N{I|L}]|[RA]|[KV]}DDD{M(Oxidation (M))|F}TA[AG]DY;[TA]{[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}TAQDY;[{I|L}T]QDD{M(Oxidation (M))|F}TA[AG]DY;[{I|L}T][AG]DD{M(Oxidation (M))|F}TAQDY;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}T]D[YR]QDY;[TA]{[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}TA[AG]DY 4.1025;3.5873;3.4247;3.4086;2.8934;2.7497;2.7308;2.7308;2.1167;2.0581 -;+;-;-;-;-;-;-;-;- + 325 1 2.114 51283.6 1.0 2725 3422 6141 DOHH2_400M_050219_1,6149 DOHH2_400M_050219_1,6149,KVDDDFTAQDY False True KVDDDFTAQDY 33.732687 658.7872 1209755.375 6141.0 ENSG00000176390|ENST00000324238|CRLF3;;nc|ENSG00000176390|Q8IUI8-2|CRLF3 6.9616397221883135 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6150 33.735 132.0 463460.0 25 0 51153.0 + 24462 MIDETRNSLY 10 90 621.2957957229484 1240.5770385126966 2 621.2960082888603 MULTI CID FTMS 0 0 0 6141 197420.609375 0.9724408421614876 -1 0.1264762878417968 9 Unmodified _MIDETRNSLY_ ENSG00000132305|ENST00000410111|IMMT;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT 53.31671820480216 0.0606844387689228 1 M{I|L}DEM 5 6 66.498 0.0 0.0 5.3602 0.0 0.0 0.0 618.3245333307249 618.3245333307249 36.49288766643714 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3494850021680094 0.0 M{I|L}DEM 5.3602 - 153 + 1 2.114 52453.0 1.0 2726 3422 6141 DOHH2_400M_050219_1,6150 DOHH2_400M_050219_1,6150,MIDETRNSLY True True MIDETRNSLY 33.735379 621.29600828886 2418840.75 6141.0 nc|ENSG00000132305|Q16891-4|IMMT;;ENSG00000132305|ENST00000410111|IMMT;;nc|ENSG00000132305|Q16891-3|IMMT;;nc|ENSG00000132305|Q16891-2|IMMT 7.893655618031819 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6151 33.749 800.0 166120.0 25 0 10113.0 + 8395 ESEEEEDDDSY 11 132 673.7229102379075 1345.431267542615 2 673.7228881716728 MULTI CID FTMS 0 0 0 6141 140977.5625 0.2997878158589869 1 -0.0817298889160156 10 Unmodified _ESEEEEDDDSY_ REV__ENSG00000048649|ENST00000308488|RSF1;REV__nc|ENSG00000048649|Q96T23-2|RSF1;REV__nc|ENSG00000048649|Q96T23-3|RSF1 12.240655878213236 0.7805268987462184 1 QY 2 -1 31.638 0.0 0.0 2.3515 0.0 0.0 1036.3011314190214 0.0 1036.3011314190214 0.0 9.431890546242345 0.0 0.0 0 0.6421590589602533 0.0 0.0 0.4247425010840047 QY 2.3515 - 222 1 2.114 100575.1 0.7099999785423279 2727 3422 6141 DOHH2_400M_050219_1,6151 DOHH2_400M_050219_1,6151,ESEEEEDDDSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6152 33.754 278.0 321310.0 25 0 33856.0 + -1 EPITKHIGL 9 120 504.3011434302868 503.2938669636868 1 504.3003417849541 MULTI CID FTMS 0 0 0 6141 155745.125 0.9269097444529903 -1 0.1264762878417968 11 ENST00000411875.1_1_7:42961455-42966220:-|nuORF;ENSG00000106588|ENST00000223321|PSMA2;ENST00000429685.1_1_2:203044091-203044292:+|nuORF 1 {I|L} 1 -1 11.99 0.0 0.0 2.3822 0.0 0.0 372.1987264380993 0.0 372.1987264380993 0.0 5.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.3822 - 46 + 1 2.114 72517.6 1.0 2728 3422 6141 DOHH2_400M_050219_1,6152 DOHH2_400M_050219_1,6152, False False EPITKHIGL 33.75432 504.300341784954 771607.25 6141.0 ENST00000411875.1_1_7:42961455-42966220:-|nuORF;;ENSG00000106588|ENST00000223321|PSMA2;;ENST00000429685.1_1_2:203044091-203044292:+|nuORF 4.312080065409343 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6153 33.759 227.0 293640.0 25 0 29236.0 + 11120 GEGPPPRVGF 10 95 506.7640910110105 1011.5136290888212 2 506.7641784548759 MULTI CID FTMS 0 0 0 6141 114873.8203125 0.476019957043808 -1 0.1264762878417968 12 Unmodified _GEGPPPRVGF_ ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2 34.40172386719151 0.2166836008404837 1 {[DA]|[EG]}GPP 5 5 46.976 0.0 0.0 4.6442 0.0 0.0 0.0 571.3003265043259 571.3003265043259 21.9145437882748 0.0 0.0 0.0 0 1.174742501084005 1.3010299956639813 0.0 0.0 + {[DA]|[EG]}GPP 4.6442 + + 54 + 1 2.114 59968.4 1.0 2729 3422 6141 DOHH2_400M_050219_1,6153 DOHH2_400M_050219_1,6153,GEGPPPRVGF False True GEGPPPRVGF 33.758576 506.764178454876 2485217.75 6141.0 nc|ENSG00000165238|Q9Y3S1-4|WNK2;;ENSG00000165238|ENST00000427277|WNK2;;nc|ENSG00000165238|Q9Y3S1|WNK2;;nc|ENSG00000165238|Q9Y3S1-2|WNK2 6.657942771911621 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6154 33.764 307.0 339080.0 25 0 68646.0 + 29159 QFRRLQAL 8 112 516.3085699140814 1030.6025868949628 2 516.3083373904228 MULTI CID FTMS 0 0 0 6141 112410.828125 0.9631040030308294 -1 0.1264762878417968 13 Unmodified _QFRRLQAL_ ENSG00000154237|ENST00000388948|LRRK1;ENST00000525284.5_1_15:101565016-101602660:+|nuORF 9.347437153973935 0.7675937258251505 1 Y 1 8 11.99 0.0 0.0 1.1634 0.0 0.0 849.5279541818753 0.0 849.5279541818753 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1634 - 79 + 1 2.114 83552.1 1.0 2730 3422 6141 DOHH2_400M_050219_1,6154 DOHH2_400M_050219_1,6154,QFRRLQAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6155 33.774 470.0 800900.0 25 0 82892.0 -1 0 78 993.706347423356 0 993.7072631716728 PEAK CID FTMS 0 0 0 6141 732785.5625 1.0 0 0.0 14 1 Q{[CP]|[EA]}ET{[QN]|[E{I|L}]|[KN]}QEK 10 -1 22.396 0.0 0.0 1.128 0.0 0.0 309.6264492827009 487.1785982721313 796.8050475548322 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{[CP]|[EA]}ET{[QN]|[E{I|L}]|[KN]}QEK 1.128 - 118 + 1 2.114 241742.4 1.0 2731 3422 6141 DOHH2_400M_050219_1,6155 DOHH2_400M_050219_1,6155, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6156 33.78 353.0 313270.0 25 0 18088.0 -1 0 108 918.4199753487844 1834.8253977643687 2 918.4320556521416 MULTI CID FTMS 0 0 0 -1 0 15 1 [NP]{I|L}NAD[RH]{M(Oxidation (M))|F}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 91.308 0.0 0.0 4.9764 4.9764 75.457 0.0 0.0 0.0 13.857055522550256 60.9855787361689 13.857055522550256 1.5839738301411046 0 2.254432191740108 0.9208187539523752 0.4247425010840047 0.3807196863200844 [NP]{I|L}NAD[RH]{M(Oxidation (M))|F}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}SAG[YT]AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[YT]AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[RH]{M(Oxidation (M))|F}AN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[RH]{M(Oxidation (M))|F}AGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGAD[RH]{M(Oxidation (M))|F}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}SAG[YT]AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}SAG[YT]AN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}SAG[YT]AGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.9764;4.8901;4.7542;4.7166;4.4851;4.4851;4.4851;4.3996;4.3996;4.3996 -;-;-;-;-;-;-;-;-;- 5864 1 2.114 77367.6 1.0 2732 3422 6141 DOHH2_400M_050219_1,6156 DOHH2_400M_050219_1,6156, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6157 33.784 181.0 397020.0 25 0 73058.0 + 8571 ETLWSNSNY 9 104 557.2451902020703 0 557.2457153201103 PEAK CID FTMS 0 0 0 6141 176961.328125 0.5583402253726434 -1 0.1264762878417968 16 Unmodified _ETLWSNSNY_ chr6:33131342-33134080|29|22.1|0.1|7.84|-|1|TE_info:MER57-int,MER57-int_dup428,ERV1,LTR,donor,-,33134080,33134898|HLA-DPA3,None|5;MER57-int_dup428|chr6:33132600-33134898:-|2.586491035679624|0.0776769780525371|5.06|48.0|27|2|sense 7.910154910731844 0.3362437653303669 1 VE[DP]N 5 8 13.473 0.0 0.0 1.2111 0.0 0.0 394.18067473832167 161.02474390201408 555.2054186403358 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.6421590589602533 VE[DP]N 1.2111 - 34 + 1 2.114 60818.7 1.0 2733 3422 6141 DOHH2_400M_050219_1,6157 DOHH2_400M_050219_1,6157,ETLWSNSNY False True False False ERV PXD020620_cell_line DOHH2_400M_050219_1 6159 33.788 109.0 414360.0 25 0 48953.0 33680 SIYFSQLY 8 90 510.75359754254094 1019.492642151882 2 510.7538635134697 MULTI CID FTMS 0 0 0 6158 362154.65625 0.245949800807162 2 -0.2224044799804687 1 Unmodified _SIYFSQLY_ ENSG00000173627|ENST00000308641|APOBEC4 24.67388899826682 0.525179942228231 1 M[H{I|L}]T{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y 8 4 + 39.213 0.0 0.0 3.8464 3.8464 70.631 0.0 0.0 0.0 7.745593720067344 7.745593720067344 7.745593720067344 0.8361343778773289 0 0.3807196863200844 0.0 0.0 0.0 M[H{I|L}]T{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y;MD[RV]HS{I|L}Y;M[H{I|L}]A{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}Y;[HT]S{I|L}EAS{I|L}Y;M[H{I|L}]AG{[ES]|[DT]|[{I|L}C]}{I|L}Y;[HT]S{I|L}AES{I|L}Y;M[H{I|L}]Q{[ES]|[DT]|[{I|L}C]}{I|L}Y;M[H{I|L}]S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Y;M[H{I|L}]T{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L};MD[RV]HSY{I|L} 3.8464;3.7643;3.4021;3.0866;3.0567;2.9403;2.8655;2.8249;2.7878;2.7058 -;-;-;-;-;-;-;-;-;- 487 + 1 2.114 38429.6 1.0 2734 3423 6158 DOHH2_400M_050219_1,6159 DOHH2_400M_050219_1,6159,SIYFSQLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6160 33.797 524.0 196060.0 25 0 14306.0 28974 QDLPDCCFWAS 11 126 642.7525366584048 1283.4905203836097 2 642.7534057497978 MULTI CID FTMS 0 0 0 6158 153530.84375 0.2583658048770842 2 -0.2224044799804687 2 Unmodified _QDLPDCCFWAS_ ENST00000421852.5_1_3:185207567-185207957:-|nuORF 20.41453444215458 0.6105011870913812 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 3 8 28.339 0.0 0.0 2.2079 0.0 0.0 0.0 924.2971075592104 924.2971075592104 11.528324303708793 0.0 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.4386218330464625 + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 2.2079 + + 358 1 2.114 79507.8 1.0 2735 3423 6158 DOHH2_400M_050219_1,6160 DOHH2_400M_050219_1,6160,QDLPDCCFWAS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6161 33.799 86.0 807980.0 25 0 69838.0 + 29031 QEFEHVNGRW 10 82 434.53867469819625 1300.5941946947887 3 434.5391113162041 MULTI CID FTMS 0 0 0 6158 472662.96875 0.7037901667696086 -1 0.0817298889160156 3 Unmodified _QEFEHVNGRW_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 8.155526934196011 0.6889124077178598 1 [{M(Oxidation (M))|F}T]PWVH[HC]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 10 9 + 29.612 0.0 0.0 2.2768 2.2768 74.695 0.0 0.0 0.0 2.296962438796154 19.01640486299605 2.296962438796154 7.7815125038364386 0 0.0 0.0 0.5387254899964358 0.0 [{M(Oxidation (M))|F}T]PWVH[HC]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{M(Oxidation (M))|F}T]PVWH[HC]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[DP][YR]VH[HC]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[YC]|[HE]}[HK]VH[HC]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{M(Oxidation (M))|F}T][VS]PVH[HC]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[AG]T[KS]WH[HC]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[QT][KS]WH[HC]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 2.2768;1.6785;1.3634;1.228;0.85919;0.36201;0.21481 -;-;-;-;-;-;- 180 1 2.114 63755.1 1.0 2736 3423 6158 DOHH2_400M_050219_1,6161 DOHH2_400M_050219_1,6161,QEFEHVNGRW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6162 33.801 96.0 550480.0 25 0 38809.0 27107 PFINREQL 8 86 508.7802562798004 1015.5459596264008 2 508.7827026247978 MULTI CID FTMS 0 0 0 6158 453471.40625 0.5680790014708662 -1 0.0817298889160156 4 Unmodified _PFINREQL_ ENSG00000068784|ENST00000263736|SRBD1;nc|ENSG00000068784|Q8N5C6-2|SRBD1 19.438996006549623 0.6237395211498085 1 {M(Oxidation (M))|F}PT[WP]KQ{I|L} 8 6 + 45.399 0.0 0.0 4.4704 4.4704 84.698 0.0 0.0 0.0 22.63927546612201 13.399480616943508 13.399480616943508 13.069334721591652 0 0.4247425010840047 0.0 0.0 0.3807196863200844 {M(Oxidation (M))|F}PT[WP]KQ{I|L};{M(Oxidation (M))|F}PT[WP]K[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KK[RD]PE 4.4704;3.1835;2.6247 -;-;- 163 + 1 2.114 50516.9 1.0 2737 3423 6158 DOHH2_400M_050219_1,6162 DOHH2_400M_050219_1,6162,PFINREQL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6163 33.806 252.0 493300.0 25 0 33093.0 + 25478 NELDAVQREY 10 114 618.7963110975545 1235.578069261909 2 618.7964965701103 MULTI CID FTMS 0 0 0 6158 318153.53125 0.3774442980362125 -1 0.0817298889160156 5 Unmodified _NELDAVQREY_ ENSG00000080986|ENST00000261597|NDC80 107.5634045930896 0.0042230779264997 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVQ{[RE]|[WV]}Y 10 0 + 72.853 0.0 0.0 5.8963 5.8963 86.806 0.0 0.0 0.0 59.35850004969453 3.4196937665947047 3.4196937665947047 9.164539485499256 0 1.7059771852360797 0.0 0.7059771852360797 1.110924374808178 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVQ{[RE]|[WV]}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAV[AG]{[RE]|[WV]}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVQ[HD][VP];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVP[C(Carbamidomethyl (C))R]Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVP{[SA]|[TG]}{[SA]|[TG]}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}D{M(Oxidation (M))|F}{[WN]|[YH]}[W{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}WVP[C(Carbamidomethyl (C))R]Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAV[AG][HD][VP];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}WVP{[SA]|[TG]}{[SA]|[TG]}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[HT][HM]{I|L}{[QN]|[E{I|L}]|[KN]} 5.8963;5.1546;4.8568;4.8237;3.9596;3.7002;3.6788;3.2188;3.1163;2.971 +;-;-;-;-;-;-;-;-;- + 1462 + 1 2.114 96420.6 1.0 2738 3423 6158 DOHH2_400M_050219_1,6163 DOHH2_400M_050219_1,6163,NELDAVQREY True True NELDAVQREY 33.806034 618.79649657011 5191920.0 6158.0 ENSG00000080986|ENST00000261597|NDC80 7.000985145568848 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6164 33.82 800.0 225610.0 25 0 12839.0 + 33123 SETGALKTF 9 182 477.25059290915806 952.486632885116 2 477.2507202029228 MULTI CID FTMS 0 0 0 6158 121136.3984375 0.5065583065817699 -1 0.0817298889160156 6 Unmodified _SETGALKTF_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 49.55428908609986 0.0413471690215031 1 {[ES]|[DT]|[{I|L}C]}TGA{I|L}KT{M(Oxidation (M))|F} 9 0 + 45.719 0.0 0.0 4.7999 4.7999 77.417 0.0 0.0 0.0 22.3163217732668 14.092568545288051 14.092568545288051 3.4678748622465605 0 0.7302046884880937 0.0 0.2887254899964357 0.0 + + {[ES]|[DT]|[{I|L}C]}TGA{I|L}KT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}TQ{I|L}KT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}ASA{I|L}KT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}TGRRT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}A[RD]KT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}ASRRT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}[WR]KT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}T[RH]{I|L}NP;{[ES]|[DT]|[{I|L}C]}A{[MG]|[TS]}RR{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}T[RH]{I|L}GGP 4.7999;4.4358;4.1632;3.4691;3.1484;2.8323;2.7915;2.4233;1.6936;1.1238 +;-;-;-;-;-;-;-;-;- + 533 + 1 2.114 139281.7 0.550000011920929 2739 3423 6158 DOHH2_400M_050219_1,6164 DOHH2_400M_050219_1,6164,SETGALKTF True True SETGALKTF 33.819849 477.250720202923 1228881.25 6158.0 ENST00000472560.5_1_3:183894781-183898834:+|nuORF;;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;;nc|ENSG00000161203|Q96CW1-2|AP2M1;;ENSG00000161203|ENST00000292807|AP2M1 7.340029398600261 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6165 33.834 800.0 99090.0 25 0 5115.4 42502 VTKYCDPDSY 10 130 595.7551757693291 0 595.7551757693291 PEAK CID FTMS 0 0 0 -1 0 7 Unmodified _VTKYCDPDSY_ ENSG00000063244|ENST00000308924|U2AF2;nc|ENSG00000063244|P26368-2|U2AF2 9.38312468134398 0.3794934366477728 1 S 1 9 10.044 0.0 0.0 0.84513 0.0 0.0 920.3873053196714 178.05159937076408 1098.4389046904355 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + S 0.84513 + + 41 + 1 2.114 61118.8 0.6000000238418579 2740 3423 6158 DOHH2_400M_050219_1,6165 DOHH2_400M_050219_1,6165,VTKYCDPDSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6166 33.841 383.0 388240.0 25 0 18464.0 + 7998 MEPSTAARAW 10 170 559.7866310811801 1117.55870922916 2 559.7863647341728 MULTI CID FTMS 0 0 0 6158 192835.859375 1.0 0 0.0 8 Unmodified _EMHNKIYAI_ nc|ENSG00000244038|P39656-3|DDOST;ENST00000477229.1_1_1:20987242-20987843:-|nuORF;nc|ENSG00000244038|P39656|DDOST;nc|ENSG00000244038|P39656-2|DDOST;ENSG00000244038|ENST00000602624|DDOST 49.93300154707207 0.0405168250806675 1 [MT][KA]AATSPE 10 9 52.315 0.0 0.0 4.6812 0.0 0.0 0.0 127.04781990714754 127.04781990714754 31.34286745032816 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.2689301784845295 0.3807196863200844 [MT][KA]AATSPE 4.6812 - 2007 1 2.114 116245.0 1.0 2741 3423 6158 DOHH2_400M_050219_1,6166 DOHH2_400M_050219_1,6166,EMHNKIYAI True True MEPSTAARAW 33.840568 559.786364734173 1881574.875 6158.0 nc|ENSG00000244038|P39656-3|DDOST;;ENST00000477229.1_1_1:20987242-20987843:-|nuORF;;nc|ENSG00000244038|P39656|DDOST;;nc|ENSG00000244038|P39656-2|DDOST;;ENSG00000244038|ENST00000602624|DDOST 7.080914815266927 2.0 False 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6167 33.847 363.0 348370.0 25 0 31421.0 -1 0 116 650.6498806753044 1948.927812626113 3 650.6507446169853 MULTI CID FTMS 0 0 0 6158 165539.171875 1.0 0 0.0 9 1 [{M(Oxidation (M))|F}V]VWVHE{M(Oxidation (M))|F}[HC][RK]AEY 15 -1 + 62.546 0.0 0.0 3.2093 3.2093 50.959 0.0 0.0 0.0 1.9627248839266545 40.63486257521106 1.9627248839266545 0.0 0 0.5 0.0 0.4247425010840047 0.4247425010840047 [{M(Oxidation (M))|F}V]VWVHE{M(Oxidation (M))|F}[HC][RK]AEY;[{M(Oxidation (M))|F}V]VWVHE[NS]W[RK]AEY;[{M(Oxidation (M))|F}V]VVWHE[NS]W[RK]AEY;[{M(Oxidation (M))|F}V]VVWHE{M(Oxidation (M))|F}[HC][RK]AEY 3.2093;3.2093;2.7459;2.7459 -;-;-;- 1731 1 2.114 106888.0 1.0 2742 3423 6158 DOHH2_400M_050219_1,6167 DOHH2_400M_050219_1,6167, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6168 33.86 668.0 262430.0 25 0 29091.0 -1 MFSDNSHCPDC 11 160 438.48036042602496 1312.419251878275 3 438.4803039431572 MULTI CID FTMS 0 0 0 6158 156933.3125 0.8225515519113573 -1 0.0817298889160156 10 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))FSDNSHCPDC_ nc|ENSG00000169905|Q9H496|TOR1AIP2 8.751783647060863 0.8338564498997137 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EDS{M(Oxidation (M))|F}Y 7 -1 68.549 0.0 0.0 5.2231 0.0 0.0 0.0 374.0598543756469 374.0598543756469 53.38653730251511 0.0 0.0 0.0 0 1.035666875892183 1.6989700043360187 1.1237125054200234 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EDS{M(Oxidation (M))|F}Y 5.2231 - 485 + 1 2.114 139042.9 1.0 2743 3423 6158 DOHH2_400M_050219_1,6168 DOHH2_400M_050219_1,6168,MFSDNSHCPDC False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6169 33.869 508.0 208070.0 25 0 43014.0 + 8668 EVHKKPLP 8 131 474.28940630420726 0 474.2890807986259 PEAK CID FTMS 0 0 0 6158 102947.0625 0.426653276817602 3 -0.3045158386230469 11 Unmodified _EVHKKPLP_ REV__nc|ENSG00000233013|P0CG42|FAM157B;REV__nc|ENSG00000236438|C9JC47|FAM157A;REV__nc|ENSG00000260528|P0CG43|FAM157C 6.354104778181461 0.5763711549229614 1 E 1 -1 3.0989 0.0 0.0 0.32739 0.0 0.0 718.4166441740412 96.08258997135 814.4992341453911 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.32739 + + 19 + 1 2.114 85936.9 1.0 2744 3423 6158 DOHH2_400M_050219_1,6169 DOHH2_400M_050219_1,6169,EVHKKPLP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6171 33.873 22.0 1723700.0 25 0 121470.0 -1 LPCGIMSQMNN 11 82 612.2623717384822 1222.5101905437643 2 612.2624389529228 MULTI CID FTMS 0 0 0 6170 2715672.0 1.0 0 0.0 1 Oxidation (M) _LPCGIMSQM(Oxidation (M))NN_ ENSG00000151687|ENST00000684021|ANKAR;nc|ENSG00000151687|Q7Z5J8-2|ANKAR 12.240655878213236 0.7805268987462184 1 [DN]SA[{I|L}P]S[DN]QY 11 -1 + 63.637 0.0 0.0 5.2054 5.2054 80.819 0.0 0.0 0.0 11.231267636145006 15.07062321345802 11.231267636145006 5.5102999566398125 0 1.16944517631652 1.0969100130080565 0.6505149978319906 0.4247425010840047 [DN]SA[{I|L}P]S[DN]QY;[DN]S[{I|L}P]AS[DN]QY;[DN]AS[{I|L}P]S[DN]QY;[{I|L}P]SNDAS[DN]QY;[DN]SA[HT][C(Carbamidomethyl (C))K]QY;[NS]DA[{I|L}P]S[DN]QY;GGDSA[{I|L}P]S[DN]QY;[{I|L}P]SNDAS[DN][AG]Y;{[QD]|[EN]|[WG]|[KD]|[RS]}GS[{I|L}P]S[DN]QY;[DN]AS[HT][C(Carbamidomethyl (C))K]QY 5.2054;4.7547;4.6337;4.2867;4.0112;3.8157;3.6188;3.54;3.4902;3.4395 -;-;-;-;-;-;-;-;-;- 815 1 2.114 32781.6 1.0 2745 3424 6170 DOHH2_400M_050219_1,6171 DOHH2_400M_050219_1,6171,LPCGIMSQMNN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6172 33.875 77.0 589770.0 25 0 110910.0 + 8387 ESEDPDYYQY 10 69 654.7489179283465 1307.4832829234929 2 654.7488281130791 MULTI CID FTMS 0 0 0 6170 704731.5625 0.0747692476833923 3 -0.35003662109375 2 Unmodified _ESEDPDYYQY_ ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I 46.020951573049366 0.1035046897853725 1 YYE{[C(Carbamidomethyl (C))G]|[NC]}YYQY 9 5 YYE{[C(Carbamidomethyl (C))G]|[NC]}YY + + 18.315 21.514 2.155 1.4008 1.4008 48.456 0.0 0.0 0.0 0.0 -8.046218740408904 -8.046218740408904 0.0 0 0.0 0.0 0.0 0.4247425010840047 YYE{[C(Carbamidomethyl (C))G]|[NC]}YYQY 1.4008 - 268 + 1 2.114 38257.7 1.0 2746 3424 6170 DOHH2_400M_050219_1,6172 DOHH2_400M_050219_1,6172,ESEDPDYYQY True True ESEDPDYYQY 33.87499 654.748828113079 204350184.0 6170.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-5|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENSG00000263001|ENST00000573035|GTF2I 8.744463602701822 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6173 33.876 50.0 1234100.0 25 0 157480.0 2874 AVDPTSGQLY 10 78 525.7587094200842 1049.5028659069685 2 525.7589599490166 MULTI CID FTMS 0 0 0 6170 1029482.0 0.1246366391030654 -1 0.0851707458496093 3 Unmodified _AVDPTSGQLY_ ENSG00000132182|ENST00000254508|NUP210 24.020572477871973 0.4289996903560794 1 {[VA]|[{I|L}G]}DGQD{I|L}G{I|L}Y 10 5 + 67.427 0.0 0.0 6.4246 6.4246 82.507 0.0 0.0 0.0 3.679767852945943 8.010299956639813 3.679767852945943 3.0102999566398125 0 1.274227503252014 1.5228787452803376 0.7059771852360797 0.0 {[VA]|[{I|L}G]}DGQD{I|L}G{I|L}Y;{[VA]|[{I|L}G]}DGQ{I|L}DG{I|L}Y;[TP]SGQD{I|L}G{I|L}Y;{[VA]|[{I|L}G]}DGQDAV{I|L}Y;[TP]SGQ{I|L}DG{I|L}Y;{[VA]|[{I|L}G]}DGQD{I|L}AVY;[TP]SGQDAV{I|L}Y;{[VA]|[{I|L}G]}DG[AG]D{I|L}G{I|L}Y;{[VA]|[{I|L}G]}DGDQ{I|L}G{I|L}Y;{[VA]|[{I|L}G]}DGQADV{I|L}Y 6.4246;6.1378;6.074;5.97;5.7872;5.6614;5.6194;5.5514;5.4882;5.3963 -;-;-;-;-;-;-;-;-;- 1015 1 2.114 54962.2 1.0 2747 3424 6170 DOHH2_400M_050219_1,6173 DOHH2_400M_050219_1,6173,AVDPTSGQLY False True AVQDDLGGIY 33.876319 525.758959949017 42209340.0 6170.0 nc|ENSG00000134909|A7KAX9|ARHGAP32;;nc|ENSG00000134909|A7KAX9-2|ARHGAP32;;ENSG00000134909|ENST00000682385|ARHGAP32 -0.0718510150909423 2.0 False 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6174 33.88 175.0 820970.0 25 0 80834.0 + 14509 IGQIKRIL 8 97 470.8188304150024 939.6231078968048 2 470.8188659548759 MULTI CID FTMS 0 0 0 6170 596903.6875 0.1817873408847147 -1 0.0851707458496093 4 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 34.10243960390752 0.3329570729325616 1 K{I|L}KR{I|L}{I|L} 6 -1 44.257 0.0 0.0 4.71 0.0 0.0 170.06760154437376 0.0 170.06760154437376 0.0 24.79270469164188 0.0 0.0 0 1.6861818737241734 0.0 0.0 0.3807196863200844 K{I|L}KR{I|L}{I|L} 4.71 - 96 + 1 2.114 116935.7 1.0 2748 3424 6170 DOHH2_400M_050219_1,6174 DOHH2_400M_050219_1,6174,IGQIKRIL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6175 33.882 122.0 973640.0 25 0 279830.0 + 7940 ELRRTLQSL 9 91 558.3299932409477 1114.645433548695 2 558.3303100466728 MULTI CID FTMS 0 0 0 6170 564626.875 1.0 0 0.0 5 Unmodified _ELRRTLQSL_ ENSG00000139842|ENST00000375440|CUL4A;ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000139842|Q13619-2|CUL4A;nc|ENSG00000158290|Q13620-3|CUL4B;nc|ENSG00000158290|Q13620|CUL4B 27.628801355627647 0.1796483985696185 1 {I|L}E 2 8 34.82 0.0 0.0 3.1239 0.0 0.0 0.0 869.4978760181323 869.4978760181323 14.387116332977712 0.0 0.0 0.0 0 0.0 1.154901959985743 0.3807196863200844 0.0 {I|L}E 3.1239 - 94 + 1 2.114 92088.2 1.0 2749 3424 6170 DOHH2_400M_050219_1,6175 DOHH2_400M_050219_1,6175,ELRRTLQSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6176 33.885 121.0 598530.0 25 0 57366.0 + 11092 GEEGSARMW 9 95 511.721828542738 1021.429104152276 2 511.7216064333916 MULTI CID FTMS 0 0 0 6170 398094.0625 0.1867548065392366 -1 0.0851707458496093 6 Unmodified _GEEGSARMW_ ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF 63.960520009940105 0.0238892913700936 1 {[DA]|[EG]}EGSARMW 9 0 + 97.841 0.0 0.0 9.5788 9.5788 95.857 0.0 0.0 0.0 78.3771376077312 13.46787486224656 13.46787486224656 11.708187539523747 0 1.6237125054200234 2.0 0.75 0.25 + + {[DA]|[EG]}EGSARMW;{[DA]|[EG]}EGSA[VG]MW;{[DA]|[EG]}E{[QS]|[NT]}RMW;{[DA]|[EG]}WSA[VG]MW;{[DA]|[EG]}EG[WK]MW;{[DA]|[EG]}E{[QS]|[NT]}[VG]MW;{[DA]|[EG]}EGSA{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{I|L};{[DA]|[EG]}EGH{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L};{[DA]|[EG]}E{[QS]|[NT]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{I|L};{[DA]|[EG]}E[HS][YT]S{I|L} 9.5788;8.4326;7.4036;7.0588;6.8404;6.2521;6.1784;4.7771;3.9979;3.7032 +;-;-;-;-;-;-;-;-;- + 243 + 1 2.114 61960.1 1.0 2750 3424 6170 DOHH2_400M_050219_1,6176 DOHH2_400M_050219_1,6176,GEEGSARMW True True GEEGSARMW 33.884761 511.721606433392 11833411.0 6170.0 ENST00000550009.1_1_12:120875908-120876378:+|nuORF;;ENSG00000111775|ENST00000229379|COX6A1 7.103527704874675 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6177 33.887 104.0 705160.0 25 0 57087.0 + 24357 MEPSTAARAW 10 95 560.2668615922553 1118.5191702513105 2 560.2676879763603 MULTI CID FTMS 0 0 0 6170 405715.0625 1.0 0 0.0 7 Unmodified _MEPSTAARAW_ ENSG00000244038|ENST00000602624|DDOST;ENST00000477229.1_1_1:20987242-20987843:-|nuORF;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 19.361941925380144 0.5226674314761524 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PSTA 6 4 36.471 0.0 0.0 3.2607 0.0 0.0 0.0 499.2425325983032 499.2425325983032 13.028358681121231 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PSTA 3.2607 + + 116 + 1 2.114 62145.2 1.0 2751 3424 6170 DOHH2_400M_050219_1,6177 DOHH2_400M_050219_1,6177,MEPSTAARAW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6178 33.893 305.0 290980.0 25 0 16459.0 + 29032 QEFEHVNGRW 10 111 651.3039863831789 1300.5934198331577 2 651.3039428591728 MULTI CID FTMS 0 0 0 6170 254085.359375 1.0 0 0.0 8 Unmodified _QEFEHVNGRW_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 47.594388314883695 0.0942698883389255 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}{I|L}HE[NS]GQ 11 6 + 47.312 0.0 0.0 3.6377 3.6377 70.573 0.0 0.0 0.0 1.3122813092856234 9.128498242810998 1.3122813092856234 1.3122813092856234 0 0.5 0.0 0.805462187404089 0.5796896906561032 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}{I|L}HE[NS]GQ;[YE]{I|L}[KP]HE[NS]GQ;[AG]E{M(Oxidation (M))|F}{I|L}{I|L}HE[NS]GQ;[AG]TA[KC]VHE[NS]GQ;[{M(Oxidation (M))|F}V]VWVHE[NS]GQ;[QT]A[KC]VHE[NS]GQ;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}{I|L}HEEEQ;[YE]{I|L}[KP]HEEEQ;[AG]E{M(Oxidation (M))|F}{I|L}{I|L}HEEEQ;[AG]T[KS]WHE[NS]GQ 3.6377;3.5368;3.486;3.2853;3.2333;3.1473;3.1321;3.0312;2.9776;2.7746 -;-;-;-;-;-;-;-;-;- 1272 1 2.114 69226.3 1.0 2752 3424 6170 DOHH2_400M_050219_1,6178 DOHH2_400M_050219_1,6178,QEFEHVNGRW True True QEFEHVNGRW 33.892576 651.303942859173 4389875.0 6170.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 7.0989909172058105 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6179 33.9 415.0 333970.0 25 0 22623.0 + 36572 TALKKYVL 8 141 468.3001311761759 934.5857094191516 2 468.2997924685478 MULTI CID FTMS 0 0 0 6170 190366.203125 0.8435148167136366 -1 0.0851707458496093 9 Unmodified _TALKKYVL_ ENSG00000127483|ENST00000438032|HP1BP3;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;nc|ENSG00000127483|Q5SSJ5-3|HP1BP3 56.17704186161178 0.1143274477948619 1 TA{I|L}KKYV{I|L} 8 0 + 67.095 0.0 0.0 7.1791 7.1791 93.782 0.0 0.0 0.0 25.98304000566088 13.399480616943508 13.399480616943508 14.165090889956671 0 1.8781446971601312 2.0 0.0 0.0 + + TA{I|L}KKYV{I|L};[TA]{I|L}KKYV{I|L};[YV]KK{I|L}AT{I|L};[K{I|L}]KYVAT{I|L};KK{I|L}YVAT{I|L};[YV]KK[VS]V{I|L};[R{M(Oxidation (M))|F}]{I|L}KKM{I|L};[K{I|L}]K[TA]YV{I|L};[{I|L}A]TKKYV{I|L};[K{I|L}]KY[TA]V{I|L} 7.1791;5.6634;4.4187;3.8045;3.0566;3.0553;2.9694;2.6343;2.6281;2.4411 +;+;-;-;-;-;-;-;-;- + 321 + 1 2.114 111554.6 1.0 2753 3424 6170 DOHH2_400M_050219_1,6179 DOHH2_400M_050219_1,6179,TALKKYVL True True TALKKYVL 33.899972 468.299792468548 1547163.625 6170.0 nc|ENSG00000127483|Q5SSJ5-3|HP1BP3;;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;;ENSG00000127483|ENST00000438032|HP1BP3 3.743403991063436 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6180 33.905 265.0 293550.0 25 0 29911.0 + 25166 MSDVVKGVY 9 117 499.2552421613777 996.4959313895554 2 499.2551757693291 MULTI CID FTMS 0 0 0 6170 170792.40625 0.7620715614446818 -1 0.0851707458496093 10 Unmodified _MSDVVKGVY_ ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-5|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4 43.77239144664712 0.0547478964384323 1 MSDVV[RK]Y 8 2 + 59.659 0.0 0.0 5.9868 5.9868 89.499 0.0 0.0 0.0 10.76606256887672 10.76606256887672 10.76606256887672 10.76606256887672 0 1.5044321917401078 2.0 0.0 0.0 MSDVV[RK]Y;{[MS]|[{M(Oxidation (M))|F}A]}DV[RK]VY;[DV]SVV[KG]MY;[DV]VSV[KG]MY;[DV]SV[KG]VMY;[DV]SV[RK]MY;[DV]SV[KG]MVY;[VS]DVV[KG]MY;{[QV]|[N{I|L}]|[RA]|[KV]}GVVDSMY;[DV]S[RK]VMY 5.9868;4.9064;4.5508;3.7699;3.7655;3.5942;3.4634;3.3918;3.1561;3.1154 -;-;-;-;-;-;-;-;-;- 458 + 1 2.114 64589.1 1.0 2754 3424 6170 DOHH2_400M_050219_1,6180 DOHH2_400M_050219_1,6180,MSDVVKGVY True True MSDVVKGVY 33.904876 499.255175769329 1388096.75 6170.0 nc|ENSG00000161813|Q71RC2-4|LARP4;;nc|ENSG00000161813|Q71RC2-3|LARP4;;nc|ENSG00000161813|Q71RC2-2|LARP4;;nc|ENSG00000161813|Q71RC2-5|LARP4;;nc|ENSG00000161813|Q71RC2-6|LARP4;;ENSG00000161813|ENST00000398473|LARP4 5.594079971313477 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6181 33.919 800.0 412210.0 25 0 21543.0 + 29003 QEAGIKTAF 9 209 482.7585015945549 963.5024502559098 2 482.7583190798759 MULTI CID FTMS 0 0 0 6170 161647.78125 0.0801047948878415 -1 0.0851707458496093 11 Unmodified _QEAGIKTAF_ ENSG00000128050|ENST00000512576|PAICS 89.40071534611396 0.0152361884002446 1 ATK{I|L}MA{M(Oxidation (M))|F} 7 6 50.214 0.0 0.0 5.2116 0.0 0.0 183.0876375526754 0.0 183.0876375526754 0.0 14.836682056609895 0.0 0.0 0 0.3494850021680094 0.0 0.3807196863200844 0.6237125054200234 ATK{I|L}MA{M(Oxidation (M))|F} 5.2116 - 3212 + 1 2.114 249324.5 0.7099999785423279 2755 3424 6170 DOHH2_400M_050219_1,6181 DOHH2_400M_050219_1,6181,QEAGIKTAF True True QEAGIKTAF 33.91869 482.758319079876 11344954.0 6170.0 ENSG00000128050|ENST00000512576|PAICS 7.308606147766113 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6182 33.925 369.0 277450.0 25 0 33341.0 + 11703 GLGKHKGP 8 147 397.2377032782194 792.4608536232389 2 397.2375366091728 MULTI CID FTMS 0 0 0 6170 160400.65625 0.2612722043306423 2 -0.2193450927734375 12 Unmodified _GLGKHKGP_ REV__L1P2_dup361|chr4:41495-42682:-|1.929814628144196|0.0747424431107728|4.69|43.0|28|3|sense 2.889219685676258 0.8067950007271085 1 {I|L}{I|L}HR 4 -1 42.295 0.0 0.0 5.3372 0.0 0.0 255.12079887051908 0.0 255.12079887051908 0.0 30.07638152291939 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.2614393726401688 {I|L}{I|L}HR 5.3372 - 52 + 1 2.114 82957.0 1.0 2756 3424 6170 DOHH2_400M_050219_1,6182 DOHH2_400M_050219_1,6182,GLGKHKGP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6183 33.939 800.0 424240.0 25 0 58194.0 11451 GIDVDADRPD 10 198 536.7497507861352 1071.4849486390704 2 536.7499877810478 MULTI CID FTMS 0 0 0 6170 130218.734375 0.1043908050503611 -1 0.0851707458496093 13 Unmodified _GIDVDADRPD_ ENSG00000177595|ENST00000347755|PIDD1;ENST00000524486.5_1_11:799309-803120:-|nuORF;ENST00000527357.5_1_11:799959-801918:-|nuORF;ENST00000534525.5_1_11:799959-803120:-|nuORF;nc|ENSG00000177595|Q9HB75-2|PIDD1;nc|ENSG00000177595|Q9HB75-3|PIDD1;nc|ENSG00000177595|Q9HB75-4|PIDD1;nc|ENSG00000177595|Q9HB75-5|PIDD1;nc|ENSG00000177595|Q9HB75-6|PIDD1 32.78568957990786 0.2337485590374503 1 AVDPT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}Y 9 9 + 92.929 0.0 0.0 8.6729 8.6729 95.231 0.0 0.0 0.0 33.95242492728684 11.945830421822665 11.945830421822665 11.945830421822665 0 1.6237125054200234 2.0 0.8609243748081783 0.0 AVDPT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}Y;AVDPT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L};AVDPV{[YD]|[{M(Oxidation (M))|F}M]}MY;AVDY{[NV]|[RG]}[QT]Y;AVDPTS[RD]DP;AVDPTSEWAP;AVDPTS{[QG]|[NA]}[NS]P;AVD[HM][HS]{I|L}Y;AVDY{[NV]|[RG]}[YT]Q;AVDPV{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 8.6729;7.558;7.0477;6.9861;6.8918;6.5846;6.2123;6.0266;5.83;5.7257 -;-;-;-;-;-;-;-;-;- 4538 + 1 2.114 260940.9 0.7300000190734863 2757 3424 6170 DOHH2_400M_050219_1,6183 DOHH2_400M_050219_1,6183,GIDVDADRPD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6184 33.953 800.0 279340.0 25 0 26439.0 -1 QTDEEDMGMTY 11 147 676.2393449376292 1350.4641369420583 2 676.2399169802666 MULTI CID FTMS 0 0 0 6170 114594.6875 0.6123227824708133 -1 0.0851707458496093 14 2 Oxidation (M) _QTDEEDM(Oxidation (M))GM(Oxidation (M))TY_ ENSG00000172890|ENST00000319023|NADSYN1;ENST00000531236.1_1_11:71196518-71209628:+|nuORF;nc|ENSG00000172890|Q6IA69-2|NADSYN1 5.731851221503515 0.8481046878870278 1 QEWDKYCHY 9 -1 64.228 0.0 0.0 4.756 0.0 0.0 79.9523819638401 0.0 79.9523819638401 0.0 34.11334291011583 0.0 0.0 0 0.0 0.0 0.6549471895720984 1.1382104921644451 QEWDKYCHY 4.756 - 5574 + 1 2.114 160656.0 0.75 2758 3424 6170 DOHH2_400M_050219_1,6184 DOHH2_400M_050219_1,6184,QTDEEDMGMTY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6185 33.957 139.0 418180.0 25 0 28284.0 + 7022 EELAQGRLY 9 101 539.7803439533452 0 539.7805053591728 PEAK CID FTMS 0 0 0 6170 120773.8515625 1.0 0 0.0 15 Unmodified _EELAQGRLY_ ENSG00000082212|ENST00000321341|ME2 26.88365393820708 0.1386685954232994 1 {I|L}AQ 3 6 19.693 0.0 0.0 1.8276 0.0 0.0 258.08362384243406 504.2595700551309 762.343193897565 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + {I|L}AQ 1.8276 + + 134 + 1 2.114 46482.2 1.0 2759 3424 6170 DOHH2_400M_050219_1,6185 DOHH2_400M_050219_1,6185,EELAQGRLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6186 33.96 152.0 388130.0 25 0 23781.0 + 29034 QEFGVPHQY 9 93 552.7591339204458 1103.5037149076916 2 552.7598144412041 MULTI CID FTMS 0 0 0 6170 93871.3203125 0.1563809494507398 -2 0.166900634765625 16 Unmodified _QEFGVPHQY_ ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-3|OGA 46.020951573049366 0.0490941689151868 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RPHQY 8 2 + 54.307 0.0 0.0 4.9213 4.9213 85.122 0.0 0.0 0.0 35.58311459537022 14.904630595263413 14.904630595263413 9.262137858390815 0 0.2887254899964357 0.0 0.0 0.805462187404089 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RPHQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[VG]PHQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RPH[AG]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[VG]PH[AG]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RV[HC]W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}R[WQ][NP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[VG]V[HC]W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[VG][WQ][NP];[QA]QE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}SW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[HT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W 4.9213;4.082;3.352;2.5176;2.2912;2.183;1.4518;1.3436;0.67285;0.50415 -;+;-;-;-;-;-;-;-;- + 397 + 1 2.114 51868.3 1.0 2760 3424 6170 DOHH2_400M_050219_1,6186 DOHH2_400M_050219_1,6186,QEFGVPHQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6187 33.974 800.0 124980.0 25 0 10934.0 -1 AGQCPLEEEGK 11 147 609.2765841472649 0 609.2770263552666 PEAK CID FTMS 0 0 0 6170 104449.140625 0.8066525490046541 -1 0.0851707458496093 17 Carbamidomethyl (C) _AGQC(Carbamidomethyl (C))PLEEEGK_ ENSG00000139364|ENST00000682704|TMEM132B;ENST00000534945.2_1_12:125834026-126068624:+|nuORF;nc|ENSG00000139364|Q14DG7-2|TMEM132B;nc|ENSG00000139364|Q14DG7|TMEM132B 20.41453444215458 0.3478569044516306 1 QQQKME 6 -1 38.259 0.0 0.0 3.1449 0.0 0.0 205.0847101873047 236.068170415686 441.15288060299065 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.7887254899964358 0.6237125054200234 QQQKME 3.1449 - 659 + 1 2.114 76778.2 0.6200000047683716 2761 3424 6170 DOHH2_400M_050219_1,6187 DOHH2_400M_050219_1,6187,AGQCPLEEEGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6188 33.988 800.0 133350.0 25 0 16093.0 43253 WEHTGRYRCFY 11 103 759.337972083589 1516.6613912339778 2 759.3402587771416 MULTI CID FTMS 0 0 0 6170 83608.078125 0.9751610721908306 -1 0.0851707458496093 18 Unmodified _WEHTGRYRCFY_ ENSG00000104974|ENST00000251372|LILRA1;ENST00000473156.5_1_19:55105185-55107230:+|nuORF;ENST00000495417.5_1_19:55105185-55110756:+|nuORF;nc|ENSG00000104974|O75019-2|LILRA1 5.731851221503515 0.8481046878870278 1 {[QG]|[NA]}GG{M(Oxidation (M))|F}TEAQQNA{M(Oxidation (M))|F}Y 14 11 + 73.943 0.0 0.0 4.8754 4.8754 80.819 0.0 0.0 0.0 6.667853209646182 10.311894545657196 6.667853209646182 6.667853209646182 0 0.7742275032520141 0.0 0.0 1.110924374808178 {[QG]|[NA]}GG{M(Oxidation (M))|F}TEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F}TEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GG{M(Oxidation (M))|F}TEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GG{M(Oxidation (M))|F}TEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GG{M(Oxidation (M))|F}TEA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}N{M(Oxidation (M))|F}TEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GG{[ES]|[DT]|[{I|L}C]}{I|L}M{M(Oxidation (M))|F}PNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GG{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PG]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}NTEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}N{I|L}M{M(Oxidation (M))|F}PNA{M(Oxidation (M))|F}Y 4.8754;4.4357;4.2786;4.2786;4.2786;4.2633;4.1004;4.0801;4.0649;4.0433 -;-;-;-;-;-;-;-;-;- 2750 1 2.114 77773.2 0.5799999833106995 2762 3424 6170 DOHH2_400M_050219_1,6188 DOHH2_400M_050219_1,6188,WEHTGRYRCFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6189 33.992 156.0 298090.0 25 0 26915.0 + 12764 GVPFVANP 8 79 400.7185457555357 799.4225385778714 2 400.7187988162041 MULTI CID FTMS 0 0 0 6170 379809.125 0.6311023764741387 1 -0.1372337341308593 19 Unmodified _GVPFVANP_ REV__ENST00000372725.5_1_10:76585359-76602521:+|nuORF 2.889219685676258 0.8067950007271085 1 {[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}V]YY 6 -1 {[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}V]Y + + 15.485 -0.67864 -0.10975 1.937 1.937 48.826 0.0 0.0 0.0 0.0 -0.7133375178436552 -0.7133375178436552 0.0 0 0.0 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}V]YY 1.937 - 16 + 1 2.114 41083.4 1.0 2763 3424 6170 DOHH2_400M_050219_1,6189 DOHH2_400M_050219_1,6189,GVPFVANP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6190 34.006 800.0 99812.0 25 0 8958.2 + -1 MFCCCFDDVT 10 101 657.2171874821971 1312.419822031194 2 657.2180053591728 MULTI CID FTMS 0 0 0 6170 205832.859375 1.0 0 0.0 20 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FC(Carbamidomethyl (C))C(Carbamidomethyl (C))CFDDVT_ REV__ENST00000340308.7_1_7:140034972-140035056:-|nuORF 7.289230182591677 0.6929195370588109 1 YMED 4 -1 61.23 0.0 0.0 4.6654 0.0 0.0 0.0 771.2257377356341 771.2257377356341 47.25054710168188 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.4247425010840047 0.0 YMED 4.6654 - 46 + 1 2.114 65206.8 0.7699999809265137 2764 3424 6170 DOHH2_400M_050219_1,6190 DOHH2_400M_050219_1,6190,MFCCCFDDVT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6192 34.011 38.0 1172800.0 25 0 115580.0 -1 MIEPRTLQY 9 77 583.7972748355331 1165.5799967378662 2 583.7975341677666 MULTI CID FTMS 0 0 0 6191 1279103.5 0.3905253514863569 1 -0.0821113586425781 1 Oxidation (M) _M(Oxidation (M))IEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 38.17557092003332 0.0854718145212029 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E 3 -1 37.447 0.0 0.0 3.2128 0.0 0.0 0.0 773.3937534119474 773.3937534119474 11.517412290202673 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E 3.2128 + + 62 1 2.094 40614.3 1.0 2765 3425 6191 DOHH2_400M_050219_1,6192 DOHH2_400M_050219_1,6192,MIEPRTLQY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6193 34.012 44.0 1317500.0 25 0 92999.0 38620 TTEVHPELY 9 79 544.7669538090488 1087.5193546848975 2 544.7671996951103 MULTI CID FTMS 0 0 0 6191 145104.609375 0.112292186731873 2 -0.2128028869628906 2 Unmodified _TTEVHPELY_ ENSG00000125991|ENST00000348547|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3 7.910154910731844 0.6385446671287552 1 Y 1 8 13.495 0.0 0.0 1.2409 0.0 0.0 906.444691454232 0.0 906.444691454232 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2409 + + 16 + 1 2.094 48896.9 1.0 2766 3425 6191 DOHH2_400M_050219_1,6193 DOHH2_400M_050219_1,6193,TTEVHPELY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6194 34.013 18.0 3459800.0 25 0 413000.0 + 7067 EELLGDGHSY 10 94 560.2509985407352 1118.4874441482702 2 560.2496215701103 MULTI CID FTMS 0 0 0 6191 2564564.0 0.2055247554380557 -2 0.2224044799804687 3 Unmodified _EELLGDGHSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000495288.5_1_1:151372054-151373071:+|nuORF 71.92227651296345 0.0188747003512554 1 EE{I|L}{I|L}GDGH{[{M(Oxidation (M))|F}C]|[YS]} 10 0 + 60.512 0.0 0.0 5.4102 5.4102 88.124 0.0 0.0 0.0 41.47489110259829 5.782511324331175 5.782511324331175 13.381031757241097 0 0.8494850021680094 1.6989700043360187 1.3703715150305282 0.0 + + EE{I|L}{I|L}GDGH{[{M(Oxidation (M))|F}C]|[YS]};[PS]{[YD]|[{M(Oxidation (M))|F}M]}DG{I|L}{I|L}[HC];{[ET]|[MV]}[MT]DG{I|L}{I|L}[HC];EE{I|L}{I|L}[DN]H{[{M(Oxidation (M))|F}C]|[YS]};EE{I|L}{[RE]|[WV]}GH{[{M(Oxidation (M))|F}C]|[YS]};[MT]{[ET]|[MV]}DG{I|L}{I|L}[HC];EEVS[R{M(Oxidation (M))|F}]{I|L}[HC];{[HG]|PP}DG[NP]G{I|L}{I|L}[HC];{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}D]|MM}DG{I|L}{I|L}[HC];EE{I|L}{I|L}[CS]DD[VP] 5.4102;4.2138;3.8605;3.6663;3.3083;3.2595;3.1482;2.8808;2.7622;2.6539 +;-;-;-;-;-;-;-;-;- + 453 + 1 2.094 51344.7 1.0 2767 3425 6191 DOHH2_400M_050219_1,6194 DOHH2_400M_050219_1,6194,EELLGDGHSY True True EELLGDGHSY 34.013066 560.24962157011 159169664.0 6191.0 ENST00000495288.5_1_1:151372054-151373071:+|nuORF;;ENSG00000159377|ENST00000290541|PSMB4;;ENST00000474100.1_1_1:151372658-151373852:+|nuORF 8.197482109069824 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6195 34.014 24.0 2349200.0 25 0 154300.0 + 2530 ASDPYQVHV 9 92 508.2458966295783 1014.4772403259566 2 508.2459594607353 MULTI CID FTMS 0 0 0 6191 2251875.25 0.6686848834992567 -1 0.1372337341308593 4 Unmodified _ASDPYQVHV_ ENSG00000047315|ENST00000314595|POLR2B 54.773552608820026 0.0299037012502309 1 {[SA]|[TG]}DPYQV[HV] 9 0 + 60.652 0.0 0.0 5.9787 5.9787 90.216 0.0 0.0 0.0 21.49288766643713 5.944825567400315 5.944825567400315 13.015384402724592 0 0.2742275032520141 2.0 0.0 0.3807196863200844 + + {[SA]|[TG]}DPYQV[HV];{[SA]|[TG]}DPY[AG]V[HV];{[SA]|[TG]}{[ET]|[MV]}VHD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{[ET]|[MV]}VDH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}D{[ET]|[MV]}VH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{[ET]|[MV]}DVH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVHD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVDH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}D[{I|L}T]{[CA]|SS}V[HV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QDVH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.9787;4.6957;3.6853;3.5621;3.2867;3.2654;2.8637;2.7405;2.4551;2.4438 +;-;-;-;-;-;-;-;-;- + 380 + 1 2.094 48653.1 1.0 2768 3425 6191 DOHH2_400M_050219_1,6195 DOHH2_400M_050219_1,6195,ASDPYQVHV True True ASDPYQVHV 34.014246 508.245959460735 20021640.0 6191.0 ENSG00000047315|ENST00000314595|POLR2B 8.613499959309896 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6196 34.015 27.0 2402200.0 25 0 649640.0 + 45267 YSDKYFDEHY 10 71 456.1911543768269 1365.5516337306808 3 456.1911498904228 MULTI CID FTMS 0 0 0 6191 2154705.5 0.9657298329843382 -1 0.1372337341308593 5 Unmodified _YSDKYFDEHY_ chr9:89311345-89315170|10|74.8|0.14|9.01|+|1|None,CKS2|1;ENSG00000123975|ENST00000314355|CKS2 31.635753872319068 0.2578985419642538 1 Y{[DS]|[MA]|[CV]|TT}KY{M(Oxidation (M))|F}DEHY 10 0 + 66.604 0.0 0.0 4.8774 4.8774 76.318 0.0 0.0 0.0 13.679767852945943 2.498774732165998 2.498774732165998 2.498774732165998 0 0.4247425010840047 0.0 0.7742275032520141 0.0 + + Y{[DS]|[MA]|[CV]|TT}KY{M(Oxidation (M))|F}DEHY;Y{[DS]|[MA]|[CV]|TT}KY{M(Oxidation (M))|F}DEYH;Y{[DS]|[MA]|[CV]|TT}KY{M(Oxidation (M))|F}DYEH;Y{[DS]|[MA]|[CV]|TT}KY{M(Oxidation (M))|F}[EC]S[QP] 4.8774;4.6945;4.3866;2.7516 +;-;-;- + 272 + 1 2.094 55030.2 1.0 2769 3425 6191 DOHH2_400M_050219_1,6196 DOHH2_400M_050219_1,6196,YSDKYFDEHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6197 34.017 57.0 1012600.0 25 0 87546.0 + 4833 DFKDKYESL 9 85 572.7792383339893 1143.5439237347784 2 572.7795898318291 MULTI CID FTMS 0 0 0 6191 1200183.5 1.0 0 0.0 6 Unmodified _DFKDKYESL_ ENSG00000156136|ENST00000286648|DCK;ENST00000509764.1_1_4:71891631-71892511:+|nuORF 51.41523569358685 0.0372669606867193 1 D{M(Oxidation (M))|F}KD 4 5 45.037 0.0 0.0 3.9384 0.0 0.0 0.0 635.3078707330686 635.3078707330686 4.496877909158172 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.7742275032520141 0.0 + D{M(Oxidation (M))|F}KD 3.9384 + + 656 + 1 2.094 48478.1 1.0 2770 3425 6191 DOHH2_400M_050219_1,6197 DOHH2_400M_050219_1,6197,DFKDKYESL True True DFKDKYESL 34.016875 572.779589831829 6219725.0 6191.0 ENST00000509764.1_1_4:71891631-71892511:+|nuORF;;ENSG00000156136|ENST00000286648|DCK 6.1914412180582685 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6198 34.018 36.0 1025200.0 25 0 64285.0 + -1 TTTMDQVNY 9 67 544.7321628868398 1087.4497728404797 2 544.7325317263603 MULTI CID FTMS 0 0 0 6191 1069670.375 1.0 0 0.0 7 Oxidation (M) _TTTM(Oxidation (M))DQVNY_ REV__ENSG00000090402|ENST00000264382|SI 4.75600775471527 0.7486543447549536 1 Y{I|L} 2 -1 16.454 0.0 0.0 1.513 0.0 0.0 0.0 808.2831964010417 808.2831964010417 2.4742501084004687 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 1.513 - 11 + 1 2.094 35945.9 1.0 2771 3425 6191 DOHH2_400M_050219_1,6198 DOHH2_400M_050219_1,6198,TTTMDQVNY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6199 34.02 86.0 876810.0 25 0 72418.0 + 45269 YSDKYFDEHY 10 86 683.7833039366328 1365.5520549400655 2 683.7833129763603 MULTI CID FTMS 0 0 0 6191 873989.125 0.9297247278473572 -1 0.1372337341308593 8 Unmodified _YSDKYFDEHY_ chr9:89311345-89315170|10|74.8|0.14|9.01|+|1|None,CKS2|1;ENSG00000123975|ENST00000314355|CKS2 116.74517065009208 0.0008886145119877 1 YSDKY{M(Oxidation (M))|F}DEHY 10 0 + 133.88 0.0 0.0 9.8042 9.8042 91.188 0.0 0.0 0.0 36.53212513775343 6.879839358585855 6.879839358585855 6.879839358585855 0 2.778659694992122 2.0 1.6989700043360187 0.0 + + YSDKY{M(Oxidation (M))|F}DEHY;YSDKY{M(Oxidation (M))|F}DEYH;YSDKY{M(Oxidation (M))|F}[EC]S[QP];Y[TA]{[SA]|[TG]}Y{M(Oxidation (M))|F}DEHY;YS{[ET]|[MV]}{[HG]|PP}EDEHY;{[{M(Oxidation (M))|F}C]|[YS]}DKY{M(Oxidation (M))|F}DEHY;YS[WM][HV]DEHY;YS{[ET]|[MV]}[WH]DEHY;YS{[ET]|[MV]}S[HV]DEHY;Y[TA]{[SA]|[TG]}Y{M(Oxidation (M))|F}DEYH 9.8042;9.3004;6.4448;5.6868;5.641;5.6053;5.4869;5.3799;5.3496;5.183 +;-;-;-;-;+;-;-;-;- + 1759 + 1 2.094 58959.8 1.0 2772 3425 6191 DOHH2_400M_050219_1,6199 DOHH2_400M_050219_1,6199,YSDKYFDEHY True True YSDKYFDEHY 34.019983 683.78331297636 33640300.0 6191.0 chr9:89311345-89315170|10|74.8|0.14|9.01|+|1|None,CKS2|1;;ENSG00000123975|ENST00000314355|CKS2 12.047690073649088 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6200 34.022 63.0 468340.0 25 0 30014.0 + 2857 AVDEFVMYD 9 53 363.49082402366827 1087.4506426712048 3 363.4904357790947 MULTI CID FTMS 0 0 0 6191 798144.5 1.0 0 0.0 9 Unmodified _AVDEFVMYD_ REV__ENSG00000186272|ENST00000307658|ZNF17;REV__nc|ENSG00000186272|P17021|ZNF17 7.910154910731844 0.6385446671287552 1 {[VA]|[{I|L}G]}D 3 -1 30.19 0.0 0.0 2.7762 0.0 0.0 0.0 799.2971169619602 799.2971169619602 18.93049011651808 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}D 2.7762 + + 23 + 1 2.094 33933.9 1.0 2773 3425 6191 DOHH2_400M_050219_1,6200 DOHH2_400M_050219_1,6200,AVDEFVMYD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6201 34.024 119.0 411980.0 25 0 31197.0 + 42382 VTDPSTLEQY 10 90 576.7737461893256 1151.5329394454511 2 576.7751342654228 MULTI CID FTMS 0 0 0 6191 481637.46875 0.8828280077667607 1 -0.0821113586425781 10 Unmodified _VTDPSTLEQY_ ENSG00000197081|ENST00000356956|IGF2R 46.020951573049366 0.1035046897853725 1 {[TV]|[{I|L}S]}D{[RE]|[WV]}{I|L}EQY 9 3 {[TV]|[{I|L}S]}D{[RE]|[WV]}{I|L}E + + 22.959 24.134 2.865 1.9938 1.9938 48.892 0.0 0.0 0.0 0.0 -9.005690469023481 -9.005690469023481 0.0 0 0.0 0.0 0.0 0.5 {[TV]|[{I|L}S]}D{[RE]|[WV]}{I|L}EQY 1.9938 - 312 + 1 2.094 42259.9 1.0 2774 3425 6191 DOHH2_400M_050219_1,6201 DOHH2_400M_050219_1,6201,VTDPSTLEQY True True VTDPSTLEQY 34.023985 576.775134265423 3980531.25 6191.0 ENSG00000197081|ENST00000356956|IGF2R 8.012399037679037 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6202 34.026 99.0 442060.0 25 0 51920.0 + 5438 DLNMNITFYV 10 76 410.5350962318236 1228.5834592956708 3 410.5355407595634 MULTI CID FTMS 0 0 0 6191 387927.125 0.2689183275752857 -1 0.1372337341308593 11 Unmodified _DLNMNITFYV_ REV__ENSG00000156253|ENST00000493196|RWDD2B;REV__ENST00000286777.6_1_21:30380429-30391601:-|nuORF;REV__ENST00000472184.1_1_21:30380697-30391601:-|nuORF 7.289230182591677 0.6929195370588109 1 V 1 -1 15.485 0.0 0.0 1.2604 0.0 0.0 1111.5037606646144 0.0 1111.5037606646144 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2604 + + 103 + 1 2.094 41404.5 1.0 2775 3425 6191 DOHH2_400M_050219_1,6202 DOHH2_400M_050219_1,6202,DLNMNITFYV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6203 34.029 122.0 460510.0 25 0 32052.0 2627 ASVKEQELQF 10 99 589.8077682091671 1177.600983485134 2 589.8068115115166 MULTI CID FTMS 0 0 0 6191 361835.03125 1.0 0 0.0 12 Unmodified _ASVKEQELQF_ ENSG00000144283|ENST00000389759|PKP4;ENSG00000169862|ENST00000304623|CTNND2;ENST00000509868.1_1_5:11508500-11903965:-|nuORF;nc|ENSG00000144283|Q99569-2|PKP4;nc|ENSG00000169862|Q9UQB3-2|CTNND2 28.49450938151212 0.328477364964909 1 {[DA]|[EG]}S[VS]{[NV]|[RG]}V{I|L}Q{M(Oxidation (M))|F} 11 5 + 43.424 0.0 0.0 3.6875 3.6875 77.911 0.0 0.0 0.0 7.74135297250178 18.908777580442333 7.74135297250178 7.997115584738687 0 1.0138793319624575 1.3979400086720375 0.2887254899964357 0.0 {[DA]|[EG]}S[VS]{[NV]|[RG]}V{I|L}Q{M(Oxidation (M))|F};{[SA]|[TG]}V[WQ]TV{I|L}Q{M(Oxidation (M))|F};{[DA]|[EG]}S[VS]{[NV]|[RG]}{M(Oxidation (M))|F}S[RP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WQ]TV{I|L}Q{M(Oxidation (M))|F};[Q{I|L}]A{I|L}[C(Carbamidomethyl (C))S]V{I|L}Q{M(Oxidation (M))|F};{[SA]|[TG]}V[WQ]TV{I|L}[AG]{M(Oxidation (M))|F};{[SA]|[TG]}D[VS]{[NV]|[RG]}V{I|L}Q{M(Oxidation (M))|F};{[SA]|[TG]}V[WQ]T{M(Oxidation (M))|F}S[RP];[Q{I|L}]A{I|L}[WC(Carbamidomethyl (C))]{I|L}Q{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WQ]TV{I|L}[AG]{M(Oxidation (M))|F} 3.6875;3.0084;2.8309;2.7321;2.271;2.2302;2.222;2.1518;1.9719;1.9502 -;-;-;-;-;-;-;-;-;- 326 1 2.094 45660.2 1.0 2776 3425 6191 DOHH2_400M_050219_1,6203 DOHH2_400M_050219_1,6203,ASVKEQELQF False True KESDPSKLQF 34.028664 589.806811511517 2042951.5 6191.0 ENSG00000183624|ENST00000383463|HMCES 4.104151884714763 2.0 False 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6204 34.031 133.0 474860.0 25 0 63088.0 + 42145 VSAEEALKY 9 102 505.26417593841165 1008.5137989436232 2 505.2646667361259 MULTI CID FTMS 0 0 0 6191 390843.28125 0.9091800911492844 -1 0.1372337341308593 13 Unmodified _VSAEEALKY_ ENSG00000070061|ENST00000374647|ELP1 36.506200033944 0.094635877243972 1 VSAEEA{I|L}KY 9 0 + 68.898 0.0 0.0 6.8317 6.8317 93.65 0.0 0.0 0.0 46.50260426274315 11.962724883926654 11.962724883926654 18.470325397914564 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + VSAEEA{I|L}KY;VSAEEA[YK]{I|L};VSA[HS]Q{[NV]|[RG]}[PA];VSA[HS]Q{[QV]|[N{I|L}]|[RA]|[KV]}[PG];{[QV]|[N{I|L}]|[RA]|[KV]}[TA]Q[HS]A[PA] 6.8317;5.0002;3.083;2.8291;0.72983 +;-;-;-;- + 364 + 1 2.094 51838.0 1.0 2777 3425 6191 DOHH2_400M_050219_1,6204 DOHH2_400M_050219_1,6204,VSAEEALKY True True VSAEEALKY 34.031364 505.264666736126 2477581.0 6191.0 ENSG00000070061|ENST00000374647|ELP1 6.966002305348714 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6205 34.038 385.0 307710.0 25 0 25494.0 + 471 AEFYHPGQEY 10 120 620.7682108355375 1239.521868737875 2 620.7679321169853 MULTI CID FTMS 0 0 0 6191 276132.09375 0.8410612176132883 -1 0.1372337341308593 14 Unmodified _AEFYHPGQEY_ CSNK2A1|p.K229Rfs*15|1|0.27|ENSG00000101266|chr20:489819-489819|C/-|frameshift_variant;ENSG00000101266|ENST00000217244|CSNK2A1;ENSG00000254598|ENST00000528848|CSNK2A3;nc|ENSG00000101266|P68400-2|CSNK2A1 57.24910588100465 0.0438022649904578 1 {[CP]|[EA]}QTYHEAEY 10 5 + 79.448 0.0 0.0 6.4096 6.4096 91.525 0.0 0.0 0.0 5.764837301042718 40.99577208169846 5.764837301042718 12.971736348700093 0 1.305462187404089 0.0 1.524227503252014 0.3807196863200844 {[CP]|[EA]}QTYHEAEY;{[CP]|[EA]}[AG]TYHEAEY;{[QD]|[EN]|[WG]|[KD]|[RS]}[VS]YHEAEY;{[CP]|[EA]}QTTAQEAEY;[YE]Q[TA]HEAEY;{[QS]|[NT]}[DV]YHEAEY;{[WN]|[YH]}{M(Oxidation (M))|F}TY{M(Oxidation (M))|F}AEY;{[WN]|[YH]}{M(Oxidation (M))|F}PGQEAEY;{[CP]|[EA]}{M(Oxidation (M))|F}[NS]Y{M(Oxidation (M))|F}AEY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}C(Carbamidomethyl (C))[TP]HEAEY 6.4096;5.3631;5.2394;4.9338;4.8794;4.8371;4.7657;4.6227;4.2811;4.2512 -;-;-;-;-;-;-;-;-;- 4228 1 2.094 90471.6 1.0 2778 3425 6191 DOHH2_400M_050219_1,6205 DOHH2_400M_050219_1,6205,AEFYHPGQEY True True AEFYHPGQEY 34.038283 620.767932116985 2949861.75 6191.0 nc|ENSG00000101266|P68400-2|CSNK2A1;;ENSG00000101266|ENST00000217244|CSNK2A1;;CSNK2A1|p.K229Rfs*15|1|0.27|ENSG00000101266|chr20:489819-489819|C/-|frameshift_variant;;ENSG00000254598|ENST00000528848|CSNK2A3 7.481614589691162 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6206 34.043 245.0 592970.0 25 0 45130.0 39722 VEKEAGWAWPG 11 134 615.2985529708077 1228.5825530084153 2 615.2987548708916 MULTI CID FTMS 0 0 0 6191 267652.0625 0.2359828147820294 -1 0.1372337341308593 15 Unmodified _VEKEAGWAWPG_ ENST00000566159.1_1_16:1364579-1364975:+|nuORF 36.506200033944 0.2662161991516171 1 D{I|L}KE[HN][DP]YV 10 9 + 79.403 0.0 0.0 6.463 6.463 81.387 0.0 0.0 0.0 2.2134030500787816 7.486964716146787 2.2134030500787816 2.2134030500787816 0 1.6549471895720984 2.0 0.6989700043360187 0.0 D{I|L}KE[HN][DP]YV;VEKE[HN][DP]YV;D{I|L}KE{[YD]|[{M(Oxidation (M))|F}M]}[KG]YV;D{I|L}KE[HN]{M(Oxidation (M))|F}PMV;D{I|L}KE[HN][DP]VY;VEKE{[YD]|[{M(Oxidation (M))|F}M]}[KG]YV;VEKE[HN]{M(Oxidation (M))|F}PMV;VEKE[HN][DP]VY;D{I|L}KE{[YD]|[{M(Oxidation (M))|F}M]}[KG]VY;VEKE{[YD]|[{M(Oxidation (M))|F}M]}[KG]VY 6.463;6.2828;6.0037;5.8862;5.8536;5.8235;5.7061;5.6734;5.3943;5.2141 -;-;-;-;-;-;-;-;-;- 1865 + 1 2.094 109163.1 1.0 2779 3425 6191 DOHH2_400M_050219_1,6206 DOHH2_400M_050219_1,6206,VEKEAGWAWPG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6207 34.048 298.0 949850.0 25 0 99093.0 + 38627 TTIKAFFPKK 10 198 394.2412834865837 1179.7020210599512 3 394.2418090701103 MULTI CID FTMS 0 0 0 6191 234999.578125 0.0187599954532874 -2 0.2224044799804687 16 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 47.74868867922204 0.0933642699623533 1 TT{I|L}KY{I|L}WKK 9 4 + 97.373 0.0 0.0 8.254 8.254 85.657 0.0 0.0 0.0 45.00554150195547 17.230749808046326 17.230749808046326 2.768024924119672 0 0.7797966019298022 1.5228787452803376 0.4247425010840047 0.8494850021680094 TT{I|L}KY{I|L}WKK;TT{I|L}KY{I|L}KWK;TTK{I|L}Y{I|L}WKK;TT{I|L}KYK{I|L}WK;TTK{I|L}Y{I|L}KWK;TT{I|L}KYK[NG]KK;TTK{I|L}YK{I|L}WK;TT{I|L}KKY{I|L}WK;TTK{I|L}YK[NG]KK;TT{I|L}KKY[NG]KK 8.254;8.0194;7.3836;7.2539;7.149;6.708;6.3835;6.298;5.8376;5.7521 -;-;-;-;-;-;-;-;-;- 3885 + 1 2.094 225328.2 1.0 2780 3425 6191 DOHH2_400M_050219_1,6207 DOHH2_400M_050219_1,6207,TTIKAFFPKK True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6208 34.055 398.0 146830.0 25 0 13614.0 43379 WQFISWIS 8 105 533.7733462998347 1065.5321396664692 2 534.2724487185478 MULTI CID FTMS 0 0 0 6191 202591.5 0.4441091990538992 -3 0.3041343688964844 17 Unmodified _WQFISWIS_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 9.347437153973935 0.7675937258251505 1 Y 1 8 15.485 0.0 0.0 1.4532 0.0 0.0 884.4578579055302 0.0 884.4578579055302 0.0 4.771212547196626 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4532 - 114 + 1 2.094 50872.0 1.0 2781 3425 6191 DOHH2_400M_050219_1,6208 DOHH2_400M_050219_1,6208,WQFISWIS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6209 34.062 369.0 177980.0 25 0 14006.0 + 34661 SPQGRVMTI 9 97 494.7660818704471 987.5176108076944 2 494.7664062380791 MULTI CID FTMS 0 0 0 6191 132972.34375 1.0 0 0.0 18 Unmodified _SPQGRVMTI_ ENSG00000169564|ENST00000303577|PCBP1 47.594388314883695 0.0456443387682827 1 SPQ[K{I|L}]DST{I|L} 9 4 + 69.676 0.0 0.0 7.0557 7.0557 96.17 0.0 0.0 0.0 46.84017622053476 11.616225017174386 11.616225017174386 56.55059805496112 0 1.079689690656103 2.0 0.2742275032520141 0.805462187404089 SPQ[K{I|L}]DST{I|L};{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}PVMT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]DST{I|L};[QP][YR][NP]T{I|L};[QP]{[HG]|PP}[KQ]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T][YG][K{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 7.0557;1.3291;1.2744;0.54022;0.39751;0.01249 -;-;-;-;-;- 165 + 1 2.094 53463.7 1.0 2782 3425 6191 DOHH2_400M_050219_1,6209 DOHH2_400M_050219_1,6209,SPQGRVMTI True True SPQGRVMTI 34.062096 494.766406238079 841303.3125 6191.0 ENSG00000169564|ENST00000303577|PCBP1 6.383817672729492 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6210 34.076 800.0 78488.0 25 0 1774.9 -1 0 101 947.932633922424 1893.850714911648 2 948.433642566204 MULTI CID FTMS 0 0 0 6191 117461.1953125 0.6984987350859116 -1 0.1372337341308593 19 1 {NN|[MP]|[D{I|L}]|[EV]}ADYCN{I|L}RQ[HA]AN[YQ] 16 -1 + 62.743 0.0 0.0 3.313 3.313 73.633 0.0 0.0 0.0 11.485709800639157 11.494112934271136 11.485709800639157 4.247425010840047 0 1.805462187404089 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}ADYCN{I|L}RQ[HA]AN[YQ];{NN|[MP]|[D{I|L}]|[EV]}ADYNC{I|L}RQ[HA]AN[YK];{NN|[MP]|[D{I|L}]|[EV]}ADYCN{I|L}RQG{[QS]|[NT]}W[EP];{NN|[MP]|[D{I|L}]|[EV]}ADYCN{I|L}RQG[KS]W[EP];{NN|[MP]|[D{I|L}]|[EV]}ADYCN{I|L}RQK[SG]W[EP];{NN|[MP]|[D{I|L}]|[EV]}MA{M(Oxidation (M))|F}CN{I|L}RQ[HA]AN[YQ];{NN|[MP]|[D{I|L}]|[EV]}ADYCGG{I|L}RQ[HA]AN[YK];{NN|[MP]|[D{I|L}]|[EV]}ADYCN{I|L}[VG]Q[HA]AN[YK];{NN|[MP]|[D{I|L}]|[EV]}ADYCN{I|L}R[AG][HA]AN[YK];{NN|[MP]|[D{I|L}]|[EV]}ADYCN{I|L}RQ[HA]AGG[YK] 3.313;3.0887;3.049;3.049;3.049;2.9146;2.837;2.837;2.837;2.837 -;-;-;-;-;-;-;-;-;- 4898 1 2.094 49518.1 0.5799999833106995 2783 3425 6191 DOHH2_400M_050219_1,6210 DOHH2_400M_050219_1,6210, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6211 34.088 638.0 132570.0 25 0 8417.8 + 3753 DAGYALLK 8 145 425.73731771204285 0 425.7376891970634 PEAK CID FTMS 0 0 0 6191 117724.453125 1.0 0 0.0 20 Unmodified _DAGYALLK_ REV__ENSG00000181626|ENST00000587848|ANKRD62 12.531546534597751 0.5131024102181418 1 {M(Oxidation (M))|F}VT{I|L} 4 -1 16.517 0.0 0.0 1.9444 0.0 0.0 243.0846605266832 143.0830477350219 386.1677082617051 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.2742275032520141 0.0 {M(Oxidation (M))|F}VT{I|L} 1.9444 - 49 + 1 2.094 69424.6 1.0 2784 3425 6191 DOHH2_400M_050219_1,6211 DOHH2_400M_050219_1,6211,DAGYALLK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6213 34.093 65.0 658130.0 25 0 52023.0 -1 0 58 918.4199753487844 1834.8253977643687 2 918.9218017458916 MULTI CID FTMS 0 0 0 6212 1102226.25 1.0 0 0.0 1 1 NADQ 4 -1 29.68 0.0 0.0 1.6176 0.0 0.0 585.2588789554526 818.3841036432249 1403.6429825986777 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 NADQ 1.6176 - 47 + 1 2.094 34066.1 1.0 2785 3426 6212 DOHH2_400M_050219_1,6213 DOHH2_400M_050219_1,6213, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6214 34.094 44.0 1116600.0 25 0 54693.0 + 32928 SELDRINAQY 10 93 604.7998982817637 1207.585243630327 2 604.7991210818291 MULTI CID FTMS 0 0 0 6212 1217953.875 1.0 0 0.0 2 Unmodified _SELDRINAQY_ ENSG00000092036|ENST00000541587|HAUS4;ENST00000554063.1_1_14:23416808-23417238:-|nuORF;nc|ENSG00000092036|Q9H6D7-2|HAUS4;nc|ENSG00000092036|Q9H6D7-3|HAUS4;nc|ENSG00000092036|Q9H6D7-4|HAUS4 37.07464296494664 0.1884581770199685 1 AQY 3 7 33.812 0.0 0.0 2.8 0.0 0.0 827.4149377403903 0.0 827.4149377403903 0.0 21.49288766643714 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 + AQY 2.8 + + 258 1 2.094 38713.0 1.0 2786 3426 6212 DOHH2_400M_050219_1,6214 DOHH2_400M_050219_1,6214,SELDRINAQY False True SELDRINAQY 34.093789 604.799121081829 5871836.5 6212.0 ENSG00000092036|ENST00000541587|HAUS4;;nc|ENSG00000092036|Q9H6D7-2|HAUS4;;nc|ENSG00000092036|Q9H6D7-4|HAUS4;;ENST00000554063.1_1_14:23416808-23417238:-|nuORF;;nc|ENSG00000092036|Q9H6D7-3|HAUS4 5.975672880808513 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6215 34.095 36.0 1663400.0 25 0 128080.0 + 630 AELDRQIKSF 10 89 402.8873931179558 1205.6403499540677 3 402.8873779177666 MULTI CID FTMS 0 0 0 6212 1461745.875 0.7388368600140919 -1 0.0821113586425781 3 Unmodified _AELDRQIKSF_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 20.871137199558856 0.4973446006067743 1 AE{I|L}R{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}KS{M(Oxidation (M))|F} 10 3 + 72.868 0.0 0.0 6.0439 6.0439 87.3 0.0 0.0 0.0 40.6401070230976 13.521825181113629 13.521825181113629 9.164539485499256 0 0.4247425010840047 2.0 0.3494850021680094 0.0 AE{I|L}R{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}KS{M(Oxidation (M))|F};AE{I|L}[VG]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}KS{M(Oxidation (M))|F};AE{I|L}R{I|L}{M(Oxidation (M))|F}[YV][VP];AE{I|L}[VG]{I|L}{M(Oxidation (M))|F}[YV][VP];AE[HD]R{I|L}RR[PG];AE[HD]{I|L}RRR[PG];A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SR{I|L}RR[PG];A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L}RRR[PG];A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SR{I|L}[RN][VP];A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L}R[RN][VP] 6.0439;5.2838;3.2233;2.4632;2.0214;1.8753;1.6691;1.523;0.77399;0.62793 -;-;-;-;-;-;-;-;-;- 529 + 1 2.094 49824.0 1.0 2787 3426 6212 DOHH2_400M_050219_1,6215 DOHH2_400M_050219_1,6215,AELDRQIKSF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6216 34.097 106.0 1091300.0 25 0 103580.0 + 38630 GESSFTYRAY 10 115 590.8580204850276 1179.7014880368552 2 590.8581420779228 MULTI CID FTMS 0 0 0 6212 804088.3125 0.2589755028512761 -1 0.0821113586425781 4 Unmodified _TTIKAFFPKK_ ENSG00000139218|ENST00000369367|SCAF11 40.23920728925047 0.1550410903091231 1 TT{I|L}KY{I|L}WKK 9 4 + 91.94 0.0 0.0 7.7935 7.7935 90.129 0.0 0.0 0.0 61.26145538946314 17.899765408488904 17.899765408488904 7.7815125038364386 0 1.9361818737241727 1.3979400086720375 0.0 0.3807196863200844 TT{I|L}KY{I|L}WKK;TTK{I|L}Y{I|L}WKK;{[DS]|[MA]|[CV]|TT}{I|L}K[RH]{I|L}RR 7.7935;7.1339;1.004 -;-;- 769 + 1 2.094 89563.2 1.0 2788 3426 6212 DOHH2_400M_050219_1,6216 DOHH2_400M_050219_1,6216,TTIKAFFPKK False False GESSFTYRAY 34.097239 590.858142077923 1805105.625 6212.0 ENSG00000139218|ENST00000369367|SCAF11 3.9144556522369385 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6217 34.1 124.0 819770.0 25 0 90864.0 + 718 AEPLPRNGDQW 11 88 641.8122467411393 1281.6099405490786 2 641.8127929568291 MULTI CID FTMS 0 0 0 6212 553702.5 0.2326697387309639 -2 0.2193450927734375 5 Unmodified _AEPLPRNGDQW_ ENSG00000166483|ENST00000450114|WEE1;nc|ENSG00000166483|P30291-2|WEE1 55.23464941255904 0.0886405999673349 1 [{I|L}P]{[CP]|[EA]}EQ{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P 10 8 47.949 0.0 0.0 3.7413 0.0 0.0 0.0 197.0550739341094 197.0550739341094 22.10795294801265 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3494850021680094 0.805462187404089 [{I|L}P]{[CP]|[EA]}EQ{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P 3.7413 - 293 1 2.094 80027.0 1.0 2789 3426 6212 DOHH2_400M_050219_1,6217 DOHH2_400M_050219_1,6217,AEPLPRNGDQW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6218 34.103 157.0 339100.0 25 0 41810.0 + 24832 MPKMDQDSL 9 100 532.7415153965047 0 532.7418701052666 PEAK CID FTMS 0 0 0 6212 403982.09375 0.8955309376772758 -1 0.0821113586425781 6 Unmodified _MPKMDQDSL_ ENSG00000079459|ENST00000220584|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 49.55428908609986 0.0328875595922215 1 {I|L}SDQDMP 7 6 40.922 0.0 0.0 3.848 0.0 0.0 149.05228579281953 125.07264124088124 274.1249270337008 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.3807196863200844 {I|L}SDQDMP 3.848 - 436 + 1 2.094 46009.1 1.0 2790 3426 6212 DOHH2_400M_050219_1,6218 DOHH2_400M_050219_1,6218,MPKMDQDSL True True MPKMDQDSL 34.102924 532.741870105267 3177733.5 6212.0 ENSG00000079459|ENST00000220584|FDFT1;;nc|ENSG00000079459|P37268-5|FDFT1 6.771286487579346 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6219 34.106 165.0 494260.0 25 0 118070.0 + 8790 DLISRTAV 8 83 437.75329448768326 873.4920360421665 2 437.7533141970634 MULTI CID FTMS 0 0 0 6212 359500.03125 0.2726081316268723 -1 0.0821113586425781 7 Unmodified _EVVTRASL_ ENSG00000115524|ENST00000335508|SF3B1 25.399314129420983 0.5099049743284904 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}SRTAV 8 5 + 51.774 0.0 0.0 5.9272 5.9272 81.296 0.0 0.0 0.0 22.89468916917032 8.21720490286063 8.21720490286063 3.182503180159344 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}SRTAV;{NN|[MP]|[D{I|L}]|[EV]}VTRTAV;{[TV]|[{I|L}S]}RTAV{NN|[MP]|[D{I|L}]|[EV]} 5.9272;5.5629;3.472 -;-;- 94 + 1 2.094 69231.5 1.0 2791 3426 6212 DOHH2_400M_050219_1,6219 DOHH2_400M_050219_1,6219,EVVTRASL False False DLISRTAV 34.106162 437.753314197063 5650676.0 6212.0 ENSG00000115524|ENST00000335508|SF3B1 3.566556612650553 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6220 34.109 148.0 321580.0 25 0 29560.0 + + 15982 SEILQKEVY 9 91 554.7984104190938 1107.5822679049877 2 554.7982055544853 MULTI CID FTMS 0 0 0 6212 220433.6875 1.0 0 0.0 8 Unmodified _ITDLKEKDF_ ENST00000478999.1_1_1:150039540-150040875:+|nuORF;ENST00000497638.2_1_1:150039914-150048408:+|nuORF;ENST00000460366.5_1_1:150039914-150049098:+|nuORF;ENSG00000136631|ENST00000644510|VPS45;nc|ENSG00000136631|Q9NRW7-2|VPS45 41.8396318013385 0.0653578398400075 1 [{I|L}T]D{I|L}K 5 -1 38.461 0.0 0.0 3.4725 0.0 0.0 0.0 534.2175577821937 534.2175577821937 20.27310937020445 0.0 0.0 0.0 0 0.8807196863200843 1.3010299956639813 0.6237125054200234 0.5 [{I|L}T]D{I|L}K 3.4725 + + 337 1 2.094 42623.6 1.0 2792 3426 6212 DOHH2_400M_050219_1,6220 DOHH2_400M_050219_1,6220,ITDLKEKDF False False SEILQKEVY 34.109133 554.8005 830885.875 6212.0 ENST00000478999.1_1_1:150039540-150040875:+|nuORF;;ENST00000497638.2_1_1:150039914-150048408:+|nuORF;;ENST00000460366.5_1_1:150039914-150049098:+|nuORF;;ENSG00000136631|ENST00000644510|VPS45;;nc|ENSG00000136631|Q9NRW7-2|VPS45 6.753598054250081 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6221 34.123 800.0 243400.0 25 0 14895.0 + -1 WLNQYCSHAFY 11 128 744.8243184713216 0 744.8249389529228 PEAK CID FTMS 0 0 0 6212 199261.765625 1.0 0 0.0 9 Carbamidomethyl (C) _WLNQYC(Carbamidomethyl (C))SHAFY_ REV__ENSG00000091128|ENST00000388781|LAMB4;REV__ENST00000475469.1_1_7:107703197-107763609:-|nuORF;REV__nc|ENSG00000091128|A4D0S4-3|LAMB4 17.11289562659939 0.3845757490720307 1 TADQQAEDH 9 -1 86.092 0.0 0.0 5.7872 0.0 0.0 227.08495564475 262.1201571100219 489.2051127547719 0.0 0.0 0.0 0.0 0 1.089136830878453 0.0 0.785666875892183 1.6989700043360187 TADQQAEDH 5.7872 - 1447 + 1 2.094 138564.1 0.9100000262260436 2793 3426 6212 DOHH2_400M_050219_1,6221 DOHH2_400M_050219_1,6221,WLNQYCSHAFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6222 34.129 340.0 328230.0 25 0 23542.0 + 36756 TEAPGGYKF 9 128 485.2372601923281 968.459967451456 2 485.2369262576103 MULTI CID FTMS 0 0 0 6212 190274.4375 1.0 0 0.0 10 Unmodified _TEAPGGYKF_ ENSG00000167699|ENST00000301329|GLOD4;ENST00000576239.5_1_17:674543-685513:-|nuORF;nc|ENSG00000167699|Q9HC38-3|GLOD4;nc|ENSG00000167699|Q9HC38|GLOD4 30.63653989081413 0.1413794767160703 1 EERRPA[DP] 8 8 + 48.958 0.0 0.0 5.0552 5.0552 78.883 0.0 0.0 0.0 17.966430335102288 6.989700043360188 6.989700043360188 3.9357520326958806 0 0.8807196863200843 2.0 0.3494850021680094 0.0 EERRPA[DP];EE[RV]GPA[DP];{[ET]|[MV]}AP[YN]K{M(Oxidation (M))|F};{[ET]|[MV]}APG[YG]K{M(Oxidation (M))|F};[{I|L}T]C(Carbamidomethyl (C))[VP]PA[DP];{[QN]|[E{I|L}]|[KN]}[KP]CPA[DP];{[ET]|[MV]}AP[VP][QP]M;{[QN]|[E{I|L}]|[KN]}[RD]GPA[DP];[NP]Y[VP]PA[DP];[DP]{I|L}[WR]A[DP] 5.0552;4.6488;3.2;2.7936;2.6994;2.6177;2.5764;2.3459;2.2228;2.0585 -;-;-;+;-;-;-;-;-;- + 471 1 2.094 89220.9 1.0 2794 3426 6212 DOHH2_400M_050219_1,6222 DOHH2_400M_050219_1,6222,TEAPGGYKF False True TEAPGGYKF 34.129147 485.23692625761 2022007.75 6212.0 ENST00000576239.5_1_17:674543-685513:-|nuORF;;nc|ENSG00000167699|Q9HC38|GLOD4;;nc|ENSG00000167699|Q9HC38-3|GLOD4;;ENSG00000167699|ENST00000301329|GLOD4 6.055803616841634 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6223 34.143 800.0 122380.0 25 0 7508.7 + -1 CCWHFRCLCNE 11 106 821.313379326712 1640.612205720224 2 821.8159667849541 MULTI CID FTMS 0 0 0 6212 163645.375 0.6212314653234426 -2 0.2193450927734375 11 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))WHFRC(Carbamidomethyl (C))LC(Carbamidomethyl (C))NE_ REV__ENSG00000115596|ENST00000233948|WNT6 0.3506318815782774 0.8734936314171269 1 YE{[ET]|[MV]} 4 -1 25.718 0.0 0.0 1.5676 0.0 0.0 1100.3879102056003 0.0 1100.3879102056003 0.0 8.612562435628984 0.0 0.0 0 0.5 0.0 1.3807196863200843 0.0 YE{[ET]|[MV]} 1.5676 - 260 + 1 2.094 71405.6 0.8100000023841858 2795 3426 6212 DOHH2_400M_050219_1,6223 DOHH2_400M_050219_1,6223,CCWHFRCLCNE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6224 34.157 800.0 54027.0 25 0 5298.1 + -1 WRRWMMCRDLH 11 64 852.8888427615166 0 852.8888427615166 PEAK CID FTMS 0 0 0 -1 0 12 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))WRRWM(Oxidation (M))MC(Carbamidomethyl (C))RDLH_ REV__ENST00000393104.6_1_10:112641263-112642826:+|nuORF 0.0 0.4761840153648598 1 {M(Oxidation (M))|F}ANQ 4 -1 40.662 0.0 0.0 2.3866 0.0 0.0 309.1304309552748 931.3930758111936 1240.5235067664685 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 1.1861818737241734 {M(Oxidation (M))|F}ANQ 2.3866 - 69 + 1 2.094 36964.4 0.6600000262260437 2796 3426 6212 DOHH2_400M_050219_1,6224 DOHH2_400M_050219_1,6224,WRRWMMCRDLH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6225 34.171 800.0 591510.0 25 0 133610.0 + -1 AEAPGGELM 9 131 874.3985582486495 0 874.3986694216728 PEAK CID FTMS 0 0 0 6212 189265.625 0.4026191216461508 -1 0.0821113586425781 13 Carbamidomethyl (C) _C(Carbamidomethyl (C))RRWRYWEYWS_ nc|ENSG00000173418|P61599-2|NAA20;ENSG00000173418|ENST00000334982|NAA20 0.3070304955306653 0.4761840153648598 1 PN{I|L}NA[SG]HTAA{I|L}EG 14 -1 49.98 0.0 0.0 2.8613 0.0 0.0 260.06259185573623 151.05144678287346 411.1140386386097 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0941876774005248 0.4247425010840047 PN{I|L}NA[SG]HTAA{I|L}EG 2.8613 - 11724 + 1 2.094 312713.8 0.8600000143051147 2797 3426 6212 DOHH2_400M_050219_1,6225 DOHH2_400M_050219_1,6225,CRRWRYWEYWS False False AEAPGGELM 34.170693 874.398669421673 3596587.0 6212.0 nc|ENSG00000173418|P61599-2|NAA20;;ENSG00000173418|ENST00000334982|NAA20 7.694380760192871 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6226 34.186 800.0 151060.0 25 0 7563.1 + 13677 HQFLQNEY 8 172 539.7524240731805 1077.4902952131608 2 539.7510864138603 MULTI CID FTMS 0 0 0 6212 149688.171875 0.6956132703827933 1 -0.1306915283203125 14 Unmodified _HQFLQNEY_ ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1 16.942295170755138 0.6606234159769251 1 {NN|[MP]|[D{I|L}]|[EV]}SP{I|L}QNEY 9 4 + 35.472 0.0 0.0 3.2921 3.2921 70.82 0.0 0.0 0.0 2.165249143810378 8.824995917031949 2.165249143810378 2.165249143810378 0 0.3182503180159344 1.154901959985743 0.566901560044258 0.0 {NN|[MP]|[D{I|L}]|[EV]}SP{I|L}QNEY;{[TV]|[{I|L}S]}DP{I|L}QNEY;[AG]H{M(Oxidation (M))|F}{I|L}QNEY;[HQ]{M(Oxidation (M))|F}{I|L}QNEY;{NN|[MP]|[D{I|L}]|[EV]}SP{I|L}NQEY;{NN|[MP]|[D{I|L}]|[EV]}SP{I|L}QGGEY;{NN|[MP]|[D{I|L}]|[EV]}SP{I|L}[AG]NEY;{[TV]|[{I|L}S]}DP{I|L}NQEY;{[TV]|[{I|L}S]}DP{I|L}[AG]NEY;{[TV]|[{I|L}S]}DP{I|L}QGGEY 3.2921;3.0912;2.9441;2.9105;2.5699;2.4375;2.4375;2.369;2.2366;2.2366 -;-;-;+;-;-;-;-;-;- + 2692 1 2.094 99230.0 0.7099999785423279 2798 3426 6212 DOHH2_400M_050219_1,6226 DOHH2_400M_050219_1,6226,HQFLQNEY False True HQFLQNEY 34.185991 539.75108641386 2650839.0 6212.0 ENSG00000167986|ENST00000301764|DDB1;;nc|ENSG00000167986|Q16531-2|DDB1 4.605480988820394 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6227 34.19 207.0 367310.0 25 0 31827.0 + 36978 TFHQRGIAL 9 99 521.7931613565457 1041.5717697798914 2 521.7935668826103 MULTI CID FTMS 0 0 0 6212 148449.1875 0.4748602296483182 -1 0.0821113586425781 15 Unmodified _TFHQRGIAL_ ENSG00000106263|ENST00000360876|EIF3B;ENST00000463026.5_1_7:2404000-2406084:+|nuORF;nc|ENSG00000106263|P55884-2|EIF3B 72.96794272382148 0.0199516581995792 1 T{M(Oxidation (M))|F}HQ 4 5 46.111 0.0 0.0 4.427 0.0 0.0 0.0 525.3167208307249 525.3167208307249 14.868577201613334 0.0 0.0 0.0 0 1.2138564480975955 0.0 0.0 0.805462187404089 + T{M(Oxidation (M))|F}HQ 4.427 + + 187 + 1 2.094 62517.2 1.0 2799 3426 6212 DOHH2_400M_050219_1,6227 DOHH2_400M_050219_1,6227,TFHQRGIAL True True TFHQRGIAL 34.189934 521.79356688261 1667578.125 6212.0 nc|ENSG00000106263|P55884-2|EIF3B;;ENST00000463026.5_1_7:2404000-2406084:+|nuORF;;ENSG00000106263|ENST00000360876|EIF3B 6.523683547973633 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6228 34.204 800.0 174500.0 25 0 10469.0 -1 0 124 925.4287734794144 1848.8429940256285 2 925.4315063357352 MULTI CID FTMS 0 0 0 6212 143220.65625 0.3907443004354827 -3 0.3045158386230469 16 1 [NP]{I|L}N{M(Oxidation (M))|F}A[RH]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 93.902 0.0 0.0 5.079 5.079 56.865 0.0 0.0 0.0 7.17738087963474 7.17738087963474 7.17738087963474 0.0 0 1.2302046884880935 1.0457574905606752 0.3494850021680094 1.1307196863200843 [NP]{I|L}N{M(Oxidation (M))|F}A[RH]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ[SG][PS]{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}A[RH]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}A[RH]AEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}A[RH]AEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 5.079;5.079;4.6908;4.5914;4.5914;4.5914;4.5914;4.5914;4.5914;4.5914 -;-;-;-;-;-;-;-;-;- 5390 1 2.094 93667.4 0.6499999761581421 2800 3426 6212 DOHH2_400M_050219_1,6228 DOHH2_400M_050219_1,6228, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6229 34.219 800.0 142790.0 25 0 9131.4 -1 HLLWFEQWCLQ 11 128 780.3770293244863 1558.7395057157726 2 780.3751098513603 MULTI CID FTMS 0 0 0 6212 132992.296875 1.0 0 0.0 17 Carbamidomethyl (C) _HLLWFEQWC(Carbamidomethyl (C))LQ_ ENSG00000142207|ENST00000382751|URB1 15.248480904072842 0.7179608125786238 1 PN{I|L}NEEQ[KA]E{M(Oxidation (M))|F}{I|L}Q 13 -1 + 95.648 0.0 0.0 6.1362 6.1362 78.002 0.0 0.0 0.0 9.857094062309272 9.857094062309272 9.857094062309272 0.353454143368765 0 3.048455006504028 1.0969100130080565 0.3494850021680094 1.1307196863200843 PN{I|L}NEEQ[KA]E{M(Oxidation (M))|F}{I|L}Q;PN{I|L}NE[QT]W[WM]{I|L}Q;PN{I|L}NE[KT]W[WM]{I|L}Q;PN{I|L}NEEQ[KP]{[TV]|[{I|L}S]}YQ;[NP]{I|L}NE{[NV]|[RG]}{[CP]|[EA]}DG{M(Oxidation (M))|F}{I|L}Q;PN{I|L}NEEQ[KA]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;PN{I|L}NEEQ[KA][EP]YQ;[NP]{I|L}NE{[NV]|[RG]}[WE]G{M(Oxidation (M))|F}{I|L}Q;PNN{I|L}EEQ[KA]E{M(Oxidation (M))|F}{I|L}Q;PNN{I|L}E[KT]W[WM]{I|L}Q 6.1362;6.1136;6.1136;6.0334;5.5039;5.4947;5.454;5.3822;5.3007;5.278 -;-;-;-;-;-;-;-;-;- 2295 + 1 2.094 85860.4 0.6800000071525574 2801 3426 6212 DOHH2_400M_050219_1,6229 DOHH2_400M_050219_1,6229,HLLWFEQWCLQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6231 34.223 27.0 1275500.0 25 0 116700.0 + 2875 AVDPTSGQLY 10 76 525.7587094200842 1049.5028659069685 2 525.7590209841728 MULTI CID FTMS 0 0 0 6230 1373756.875 0.1663170797009854 2 -0.2160453796386718 1 Unmodified _AVDPTSGQLY_ ENSG00000132182|ENST00000254508|NUP210 20.453626601364224 0.5043500229302764 1 {[VA]|[{I|L}G]}D{[QG]|[NA]}D{I|L}G{I|L}Y 10 5 + 51.062 0.0 0.0 4.8653 4.8653 76.997 0.0 0.0 0.0 6.989700043360188 11.20506544868192 6.989700043360188 3.0102999566398125 0 0.8935078169319297 1.6989700043360187 0.3252574989159953 0.0 {[VA]|[{I|L}G]}D{[QG]|[NA]}D{I|L}G{I|L}Y;{[VA]|[{I|L}G]}D{[QG]|[NA]}{I|L}DG{I|L}Y;[TP]S{[QG]|[NA]}D{I|L}G{I|L}Y;[TP]S{[QG]|[NA]}{I|L}DG{I|L}Y;{[VA]|[{I|L}G]}{[QS]|[NT]}[TP]DG{I|L}Y;{[QG]|[NA]}S[TP]D{I|L}G{I|L}Y;{[QG]|[NA]}S{I|L}[TP]DG{I|L}Y;{[QG]|[NA]}S[TP]{I|L}DG{I|L}Y;{[QG]|[NA]}{[RE]|[WV]}PMG{I|L}Y 4.8653;4.5785;4.1993;3.9125;3.0556;2.5859;2.2991;2.2991;1.7958 -;-;-;-;-;-;-;-;- 148 1 2.081 31490.8 1.0 2802 3427 6230 DOHH2_400M_050219_1,6231 DOHH2_400M_050219_1,6231,AVDPTSGQLY False True AVDPTSGQLY 34.223278 525.759020984173 42209340.0 6230.0 ENSG00000132182|ENST00000254508|NUP210 3.834170659383138 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6232 34.225 80.0 437300.0 25 0 21624.0 + 29004 QEAGIKTAF 9 83 482.7585015945549 963.5024502559098 2 482.7587768435478 MULTI CID FTMS 0 0 0 6230 385026.5 0.1908004463184273 2 -0.2160453796386718 2 Unmodified _QEAGIKTAF_ ENSG00000128050|ENST00000512576|PAICS 13.90604991867851 0.4602628045680013 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{[VA]|[{I|L}G]}[KT]A{M(Oxidation (M))|F} 9 0 + 17.113 0.0 0.0 1.7761 1.7761 70.252 0.0 0.0 0.0 0.6593871989765923 2.832246886041398 0.6593871989765923 3.4678748622465623 0 0.0 0.0 0.0 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{[VA]|[{I|L}G]}[KT]A{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Q{I|L}][KT]A{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}QQ[KT]A{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[HV]VK[PG];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HV]AVK[PG] 1.7761;1.4162;1.1038;0.92101;0.60858;0.55549;0.55549 +;-;-;-;-;-;- + 147 + 1 2.081 31339.3 1.0 2803 3427 6230 DOHH2_400M_050219_1,6232 DOHH2_400M_050219_1,6232,QEAGIKTAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6233 34.226 48.0 1209500.0 25 0 98338.0 + 631 AELDRQIKSF 10 87 603.8275770420424 1205.6406011508848 2 603.8275634646416 MULTI CID FTMS 0 0 0 6230 1074783.75 1.0 0 0.0 3 Unmodified _AELDRQIKSF_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 42.86227185956083 0.1273421190728565 1 Q{I|L}KS{M(Oxidation (M))|F} 5 5 54.949 0.0 0.0 4.5576 0.0 0.0 584.2938473016852 0.0 584.2938473016852 0.0 36.136218907515314 0.0 0.0 0 1.3494850021680094 0.0 0.3494850021680094 0.0 + Q{I|L}KS{M(Oxidation (M))|F} 4.5576 + + 76 1 2.081 47476.9 1.0 2804 3427 6230 DOHH2_400M_050219_1,6233 DOHH2_400M_050219_1,6233,AELDRQIKSF True True AELDRQIKSF 34.226398 603.827563464642 18743378.0 6230.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 6.534661769866943 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6234 34.229 103.0 520600.0 25 0 40673.0 + 29035 QEFGVPHQY 9 86 552.7591339204458 1103.5037149076916 2 552.7595092654228 MULTI CID FTMS 0 0 0 6230 428272.96875 0.7134632095751373 1 -0.1003875732421875 4 Unmodified _QEFGVPHQY_ ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-3|OGA 46.020951573049366 0.0490941689151868 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RPHQY 8 2 + 39.241 0.0 0.0 3.556 3.556 80.394 0.0 0.0 0.0 21.884001744652284 11.13212724799767 11.13212724799767 9.262137858390812 0 0.2887254899964357 0.0 0.0 0.7302046884880937 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RPHQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[VG]PHQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RV[HC]W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RPH[AG]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[VG]V[HC]W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}R[WQ][NP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[VG]PH[AG]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[VG][WQ][NP] 3.556;2.7167;2.3326;2.0549;1.4933;1.4663;1.2205;0.62698 -;+;-;-;-;-;-;- + 247 + 1 2.081 48605.9 1.0 2805 3427 6230 DOHH2_400M_050219_1,6234 DOHH2_400M_050219_1,6234,QEFGVPHQY True True QEFGVPHQY 34.228613 552.759509265423 9065773.0 6230.0 ENSG00000198408|ENST00000361464|OGA;;nc|ENSG00000198408|O60502-3|OGA 8.442621231079102 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6235 34.23 83.0 666720.0 25 0 50733.0 + 2709 ATETQPIVY 9 94 511.2637043906969 1020.5128558481938 2 511.2635986208916 MULTI CID FTMS 0 0 0 6230 407746.4375 0.39239435182972 -1 0.1306915283203125 5 Unmodified _ATETQPIVY_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 39.957323273325 0.0756908302845263 1 {[DA]|[EG]}PTQHGE 8 6 46.068 0.0 0.0 4.5142 0.0 0.0 0.0 182.12324338165004 182.12324338165004 25.098812726971715 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.0 {[DA]|[EG]}PTQHGE 4.5142 - 670 1 2.081 49136.7 1.0 2806 3427 6230 DOHH2_400M_050219_1,6235 DOHH2_400M_050219_1,6235,ATETQPIVY True True ATETQPIVY 34.230497 511.263598620892 5505972.5 6230.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 4.586525758107503 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6236 34.233 106.0 557420.0 25 0 44914.0 + 44913 YPPPHQVF 8 83 492.7504948151479 983.4864366970958 2 492.7496215701103 MULTI CID FTMS 0 0 0 6230 359714.3125 0.7077871629276543 -1 0.1306915283203125 6 Unmodified _YPPPHQVF_ ENSG00000076248|ENST00000242576|UNG;ENST00000540158.1_1_12:109535484-109537104:+|nuORF;nc|ENSG00000076248|P13051-2|UNG 32.116972079565 0.368454113111938 1 YPPPP 5 4 50.79 0.0 0.0 5.1643 0.0 0.0 0.0 429.18076502017817 429.18076502017817 38.02550919747414 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPPPP 5.1643 - 215 + 1 2.081 48632.6 1.0 2807 3427 6230 DOHH2_400M_050219_1,6236 DOHH2_400M_050219_1,6236,YPPPHQVF False True YPPPHQVF 34.232734 492.74962157011 6889893.5 6230.0 ENST00000540158.1_1_12:109535484-109537104:+|nuORF;;ENSG00000076248|ENST00000242576|UNG;;nc|ENSG00000076248|P13051-2|UNG 6.868291695912679 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6237 34.235 83.0 778690.0 25 0 100880.0 + 10429 FTDPRTMGY 9 94 544.2475233423628 1086.4804937515255 2 544.2471191287041 MULTI CID FTMS 0 0 0 6230 342732.625 0.6334494677726642 -1 0.1306915283203125 7 Unmodified _FTDPRTMGY_ ENSG00000140650|ENST00000268261|PMM2;ENST00000567697.1_1_16:8904837-8941679:+|nuORF 26.88365393820708 0.1891292719743517 1 {NN|[MP]|[D{I|L}]|[EV]}QKK 5 8 21.889 0.0 0.0 2.0147 0.0 0.0 0.0 471.0973510115443 471.0973510115443 7.9098722887388675 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.1923877696554315 {NN|[MP]|[D{I|L}]|[EV]}QKK 2.0147 - 288 1 2.081 53915.3 1.0 2808 3427 6230 DOHH2_400M_050219_1,6237 DOHH2_400M_050219_1,6237,FTDPRTMGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6238 34.24 267.0 433670.0 25 0 21497.0 + 6021 DSDFRKDDFY 10 117 654.2804669043901 1306.54638087558 2 654.2802001833916 MULTI CID FTMS 0 0 0 6230 316118.03125 0.7701925706604067 -1 0.1306915283203125 8 Unmodified _DSDFRKDDFY_ ENSG00000028203|ENST00000436874|VEZT;ENST00000547997.5_1_12:95650374-95694446:+|nuORF;ENST00000549192.5_1_12:95650374-95690042:+|nuORF;ENST00000552660.5_1_12:95650374-95694446:+|nuORF;nc|ENSG00000028203|Q9HBM0-2|VEZT 88.36371040165146 0.0102134265615327 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[RV]DSDD{M(Oxidation (M))|F}Y 11 5 + 65.54 0.0 0.0 5.0162 5.0162 77.29 0.0 0.0 0.0 2.3406104928206446 17.26336081802205 2.3406104928206446 3.010299956639805 0 0.9247425010840048 0.0 1.329689690656103 0.3054621874040891 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[RV]DSDD{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[RV]DDSD{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RRDSDD{M(Oxidation (M))|F}Y;[YQ][RV]DSDD{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RRDDSD{M(Oxidation (M))|F}Y;[YQ][RV]DDSD{M(Oxidation (M))|F}Y;{[{M(Oxidation (M))|F}D]|MM}[RK]DSDD{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP]{[CA]|SS}SDD{M(Oxidation (M))|F}Y;DDPHRKDD{M(Oxidation (M))|F}Y;DSD{[NV]|[RG]}R[YE]{M(Oxidation (M))|F}Y 5.0162;4.7858;4.7434;4.7434;4.513;4.513;4.2826;4.2723;4.1253;4.1175 -;-;-;-;-;-;-;-;-;- 2272 1 2.081 91842.6 1.0 2809 3427 6230 DOHH2_400M_050219_1,6238 DOHH2_400M_050219_1,6238,DSDFRKDDFY True True DSDFRKDDFY 34.239567 654.280200183392 2669294.25 6230.0 ENST00000552660.5_1_12:95650374-95694446:+|nuORF;;ENST00000547997.5_1_12:95650374-95694446:+|nuORF;;ENST00000549192.5_1_12:95650374-95690042:+|nuORF;;ENSG00000028203|ENST00000436874|VEZT;;nc|ENSG00000028203|Q9HBM0-2|VEZT 5.233368078867595 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6239 34.244 214.0 265080.0 25 0 38863.0 3537 CVSGHPTMTQY 11 102 612.2623717384822 1222.5101905437643 2 612.2631713747978 MULTI CID FTMS 0 0 0 6230 265765.0625 0.0978634616036104 3 -0.3185653686523437 9 Unmodified _CVSGHPTMTQY_ ENSG00000145088|ENST00000273668|EAF2;nc|ENSG00000145088|Q96CJ1-2|EAF2 8.155526934196011 0.8366696279279818 1 QY 2 9 27.078 0.0 0.0 2.215 0.0 0.0 913.3764147642706 0.0 913.3764147642706 0.0 -4.263645609567458 -4.263645609567458 0.0 0 0.5 0.0 0.0 0.5 + QY 2.215 + + 512 + 1 2.081 49607.5 1.0 2810 3427 6230 DOHH2_400M_050219_1,6239 DOHH2_400M_050219_1,6239,CVSGHPTMTQY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6240 34.247 193.0 395940.0 25 0 24155.0 + + 7794 QNDLRKMQL 9 114 382.5412868554605 1144.6020311665814 3 382.5410949587822 MULTI CID FTMS 0 0 0 6230 243820.765625 0.6719326157625638 -1 0.1306915283203125 10 Unmodified _ELHQLQQHL_ nc|ENSG00000168066|Q15637-6|SF1;nc|ENSG00000168066|Q15637-5|SF1;ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-2|SF1;nc|ENSG00000168066|Q15637-7|SF1;nc|ENSG00000168066|Q15637-3|SF1 11.640296217721598 0.521594087909532 1 {I|L}EE 3 -1 24.693 0.0 0.0 2.1573 0.0 0.0 755.4396573105331 0.0 755.4396573105331 0.0 11.197887582883936 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}EE 2.1573 - 173 1 2.081 63134.8 1.0 2811 3427 6230 DOHH2_400M_050219_1,6240 DOHH2_400M_050219_1,6240,ELHQLQQHL False False QNDLRKMQL 34.247325 382.541094958782 1808041.125 6230.0 nc|ENSG00000168066|Q15637-6|SF1;;nc|ENSG00000168066|Q15637-5|SF1;;ENSG00000168066|ENST00000377390|SF1;;nc|ENSG00000168066|Q15637-4|SF1;;nc|ENSG00000168066|Q15637-2|SF1;;nc|ENSG00000168066|Q15637-7|SF1;;nc|ENSG00000168066|Q15637-3|SF1 4.312899669011434 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6241 34.254 364.0 263160.0 25 0 22206.0 + 35280 SSLLEKGLDGAK 12 103 609.3400344030857 1216.6655158729714 2 609.3400146365166 MULTI CID FTMS 0 0 0 6230 220279.015625 1.0 0 0.0 11 Unmodified _SSLLNLTPYPL_ nc|ENSG00000161634|P81605-2|DCD;ENSG00000161634|ENST00000293371|DCD 26.020703789607367 0.4812285719068541 1 SS{I|L}{I|L}EK{[VA]|[{I|L}G]}DQK 11 7 + 102.9 0.0 0.0 8.4575 8.4575 82.96 0.0 0.0 0.0 76.73616639927825 17.81289824597816 17.81289824597816 0.5551732784983017 0 1.4604093769761874 1.3010299956639813 0.8494850021680094 0.809894379144197 SS{I|L}{I|L}EK{[VA]|[{I|L}G]}DQK;SS{I|L}{I|L}EK{[RE]|[WV]}QK;SS{I|L}{I|L}EK{[VA]|[{I|L}G]}DGAK;SS{I|L}{I|L}EK{[RE]|[WV]}GAK;SS{I|L}{I|L}EK{[VA]|[{I|L}G]}DKQ;SS{I|L}{I|L}EK{[RE]|[WV]}KQ;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}KE[PS]VV;{I|L}{I|L}[W{M(Oxidation (M))|F}]KE[PS]VV 8.4575;8.4119;8.3611;8.3125;6.8357;6.7901;1.7798;1.7307 -;-;-;-;-;-;-;- 802 + 1 2.081 75026.9 1.0 2812 3427 6230 DOHH2_400M_050219_1,6241 DOHH2_400M_050219_1,6241,SSLLNLTPYPL False False SSLLEKGLDGAK 34.25389 609.340014636517 1577318.3125 6230.0 nc|ENSG00000161634|P81605-2|DCD;;ENSG00000161634|ENST00000293371|DCD 7.981046994527181 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6242 34.26 362.0 282760.0 25 0 20876.0 + 14510 IGQIKRIL 8 115 470.8188304150024 939.6231078968048 2 470.8188354372978 MULTI CID FTMS 0 0 0 6230 220756.328125 0.0672314591343805 2 -0.2160453796386718 12 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 11.640296217721598 0.738950129755968 1 K{I|L}K 3 -1 26.995 0.0 0.0 2.8729 0.0 0.0 170.06878861810964 397.2568453424438 567.3256339605534 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.4247425010840047 K{I|L}K 2.8729 - 75 + 1 2.081 86110.6 1.0 2813 3427 6230 DOHH2_400M_050219_1,6242 DOHH2_400M_050219_1,6242,IGQIKRIL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6243 34.271 585.0 241960.0 25 0 11938.0 + 15890 ISSEIKEGNLK 11 156 406.5627057220655 1216.6662877663964 3 406.5625793337822 MULTI CID FTMS 0 0 0 6230 161963.0 1.0 0 0.0 13 Unmodified _ISSEIKEGNLK_ REV__ENSG00000135837|ENST00000367607|CEP350 14.837902256254086 0.7265013024133544 1 SS{I|L}{I|L}EKG{I|L}DQK 11 -1 + 91.68 0.0 0.0 7.5354 7.5354 90.665 0.0 0.0 0.0 74.47887856000303 13.235840641106408 13.235840641106408 9.128498242811006 0 0.4545391030138068 1.5228787452803376 0.75 0.4957416651753049 SS{I|L}{I|L}EKG{I|L}DQK;SS{I|L}{I|L}EKG{I|L}D[AG]K;SS{I|L}{I|L}EKG{I|L}DKQ;SS{I|L}{I|L}EKG{I|L}[KA][DG];{[WT]|[RM]}{I|L}EK{[RE]|[WV]}KQ;{[WT]|[RM]}{I|L}EK{[RE]|[WV]}QK;SS{I|L}{I|L}[WK]PHH{I|L};{[WT]|[RM]}{I|L}EK{[RE]|[WV]}[AG]K;SS{I|L}{I|L}[WK]RR[DG];{[WT]|[RM]}{I|L}[WK]{I|L}DKQ 7.5354;6.7851;6.404;4.7149;3.8922;3.7718;3.3166;3.015;2.6289;1.8729 -;-;-;-;-;-;-;-;-;- 503 + 1 2.081 113866.2 1.0 2814 3427 6230 DOHH2_400M_050219_1,6243 DOHH2_400M_050219_1,6243,ISSEIKEGNLK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6244 34.281 580.0 213530.0 25 0 33352.0 + 34707 SPVVRVAV 8 130 413.7606798013252 0 413.7605468630791 PEAK CID FTMS 0 0 0 6230 151828.109375 1.0 0 0.0 14 Unmodified _SPVVRVAV_ ENSG00000167658|ENST00000309311|EEF2 25.399314129420983 0.3159236278339657 1 PVV 3 5 21.198 0.0 0.0 2.5679 0.0 0.0 87.03072713232605 440.2621969642369 527.292924096563 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + PVV 2.5679 + + 69 + 1 2.081 101490.2 1.0 2815 3427 6230 DOHH2_400M_050219_1,6244 DOHH2_400M_050219_1,6244,SPVVRVAV False True SPVVRVAV 34.280786 413.760546863079 542365.5625 6230.0 ENSG00000167658|ENST00000309311|EEF2 4.197479724884033 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6245 34.289 442.0 180570.0 25 0 15458.0 -1 GLYHFCLY 8 126 536.7497507861352 1071.4849486390704 2 536.7498657107353 MULTI CID FTMS 0 0 0 6230 117303.75 0.0940374129475277 2 -0.2160453796386718 15 Carbamidomethyl (C) _GLYHFC(Carbamidomethyl (C))LY_ ENSG00000205336|ENST00000562631|ADGRG1;ENST00000564907.5_1_16:57684180-57697491:+|nuORF;ENST00000564912.5_1_16:57684199-57687923:+|nuORF;ENST00000565539.5_1_16:57684180-57697491:+|nuORF;nc|ENSG00000205336|Q9Y653-3|ADGRG1;nc|ENSG00000205336|Q9Y653|ADGRG1 24.20995872069341 0.5349487244130675 1 {[VA]|[{I|L}G]}DPT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}Y 9 -1 + 58.254 0.0 0.0 5.4368 5.4368 83.924 0.0 0.0 0.0 24.95358466288572 8.129133566428557 8.129133566428557 8.129133566428557 0 1.1421590589602533 2.0 0.0 0.0 {[VA]|[{I|L}G]}DPT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}Y;{[VA]|[{I|L}G]}DPT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L};{[VA]|[{I|L}G]}D[HM]C(Carbamidomethyl (C)){[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[VA]|[{I|L}G]}DPDC(Carbamidomethyl (C)){[TV]|[{I|L}S]}[VP];{[VA]|[{I|L}G]}DPD[EP]V[KC];[{I|L}T]Y[WC(Carbamidomethyl (C))]V[KC];{[VA]|[{I|L}G]}G[C(Carbamidomethyl (C))Q][HA]V[KC] 5.4368;4.6781;2.8538;2.1773;1.7173;0.61611;0.39178 -;-;-;-;-;-;- 252 + 1 2.081 64519.4 1.0 2816 3427 6230 DOHH2_400M_050219_1,6245 DOHH2_400M_050219_1,6245,GLYHFCLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6246 34.304 800.0 112530.0 25 0 6261.9 + + 7079 QEIYGGSDSRF 11 117 630.2794411911863 1258.5443294491724 2 630.2790405154228 MULTI CID FTMS 0 0 0 6230 121837.8828125 1.0 0 0.0 16 Unmodified _EELNWFYRC_ ENSG00000115524|ENST00000335508|SF3B1;nc|ENSG00000115524|O75533-2|SF3B1 21.74664581756881 0.2544899275067181 1 EE{I|L}YG[SG]D{[QV]|[N{I|L}]|[RA]|[KV]}Y 11 -1 + 48.236 0.0 0.0 3.8327 3.8327 71.216 0.0 0.0 0.0 32.526328485440395 3.309710622901214 3.309710622901214 1.34698573897456 0 0.8807196863200843 1.5228787452803376 0.0 0.0 EE{I|L}YG[SG]D{[QV]|[N{I|L}]|[RA]|[KV]}Y;EE{I|L}YG[WH]YY;EE{I|L}Y[NS]D{[QV]|[N{I|L}]|[RA]|[KV]}Y;EE{I|L}YG[WQ][TA]Y;EE{I|L}YG[SG]D{[VA]|[{I|L}G]}GY;EE[HK][SG]GY{I|L}[HC];EE{I|L}Y[NS]D{[VA]|[{I|L}G]}GY;EE[HK][NS]Y{I|L}[HC];EE{I|L}YG[SG]{[RE]|[WV]}GY;EE{I|L}YG[SG]D[HV]GP 3.8327;3.7257;3.5494;3.5494;3.3075;3.2398;3.0213;2.9565;2.7821;2.6122 -;-;-;-;-;-;-;-;-;- 340 + 1 2.081 71034.7 0.6800000071525574 2817 3427 6230 DOHH2_400M_050219_1,6246 DOHH2_400M_050219_1,6246,EELNWFYRC False False QEIYGGSDSRF 34.303659 630.2825 0.0 6230.0 ENSG00000115524|ENST00000335508|SF3B1;;nc|ENSG00000115524|O75533-2|SF3B1 1.923629879951477 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6247 34.305 74.0 655310.0 25 0 83566.0 + 40107 VGLAAPNL 8 82 377.7256505671082 753.4367482010164 2 378.2271606326103 MULTI CID FTMS 0 0 0 6230 197888.640625 1.0 0 0.0 17 Unmodified _VGLAAPNL_ REV__ENST00000393927.8_1_19:8575473-8576517:-|nuORF;REV__ENST00000596772.5_1_19:8575473-8575713:-|nuORF 2.889219685676258 0.8067950007271085 1 {I|L} 1 -1 12.218 0.0 0.0 1.6217 0.0 0.0 622.341622934218 0.0 622.341622934218 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.6217 + + 23 + 1 2.081 43518.0 1.0 2818 3427 6230 DOHH2_400M_050219_1,6247 DOHH2_400M_050219_1,6247,VGLAAPNL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6248 34.309 190.0 375550.0 25 0 27467.0 + 18980 LDFRFRLL 8 95 360.5490059993911 1078.6251885983731 3 360.5484191775322 MULTI CID FTMS 0 0 0 6230 162793.328125 1.0 0 0.0 18 Unmodified _LDFRFRLL_ REV__ENST00000375544.7_1_9:95233032-95236940:-|nuORF 20.453626601364224 0.6087503291685402 1 D{I|L} 2 -1 25.701 0.0 0.0 2.3828 0.0 0.0 832.5038297679054 0.0 832.5038297679054 0.0 1.2641002136337676 0.0 0.0 0 0.6237125054200234 0.0 0.0 0.0 D{I|L} 2.3828 - 53 1 2.081 61264.7 1.0 2819 3427 6230 DOHH2_400M_050219_1,6248 DOHH2_400M_050219_1,6248,LDFRFRLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6249 34.314 274.0 207300.0 25 0 12783.0 + 26898 PDKRCVLY 8 111 497.2631832388318 992.5118135444636 2 497.2637817263603 MULTI CID FTMS 0 0 0 6230 133873.8125 1.0 0 0.0 19 Unmodified _PDKRCVLY_ REV__ENSG00000070371|ENST00000427926|CLTCL1;REV__nc|ENSG00000070371|P53675-2|CLTCL1 13.50788311687929 0.7113601687236069 1 {I|L}H 2 -1 16.454 0.0 0.0 1.6578 0.0 0.0 724.3584454798137 0.0 724.3584454798137 0.0 2.95880017344075 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}H 1.6578 - 126 + 1 2.081 48373.5 1.0 2820 3427 6230 DOHH2_400M_050219_1,6249 DOHH2_400M_050219_1,6249,PDKRCVLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6250 34.319 259.0 235840.0 25 0 16325.0 -1 0 112 385.18280243045086 384.1755259638509 1 385.1851379275322 MULTI CID FTMS 0 0 0 6230 123848.8203125 0.8647994447878818 1 -0.1003875732421875 20 1 {M(Oxidation (M))|F} 1 -1 11.42 0.0 0.0 2.9726 0.0 0.0 219.0963613904118 0.0 219.0963613904118 0.0 1.4199832818260028 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.9726 - 12 + 1 2.081 53469.2 1.0 2821 3427 6230 DOHH2_400M_050219_1,6250 DOHH2_400M_050219_1,6250, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6252 34.324 7.5 6853600.0 25 0 866260.0 + 38628 TTIKAFFPKK 10 78 394.2412834865837 1179.7020210599512 3 394.2413207888603 MULTI CID FTMS 0 0 0 6251 5776417.0 0.4611308561526469 1 -0.1156578063964843 1 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 26.268140514670165 0.3785003716575977 1 TT{I|L}KY{I|L}WKK 9 4 + 89.703 0.0 0.0 7.6039 7.6039 97.513 0.0 0.0 0.0 73.50501891384965 16.790521660407123 16.790521660407123 79.75177236951588 0 0.7302046884880937 1.5228787452803376 0.0 0.3807196863200844 TT{I|L}KY{I|L}WKK;[W{I|L}][VP][Q{I|L}]K{I|L}[PS] 7.6039;0.84353 -;- 106 + 1 2.082 47926.1 1.0 2822 3428 6251 DOHH2_400M_050219_1,6252 DOHH2_400M_050219_1,6252,TTIKAFFPKK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6253 34.325 12.0 3644300.0 25 0 438790.0 + 7068 EELLGDGHSY 10 74 560.2509985407352 1118.4874441482702 2 560.2517578005791 MULTI CID FTMS 0 0 0 6251 3145988.0 0.2521202100283159 1 -0.1156578063964843 2 Unmodified _EELLGDGHSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000495288.5_1_1:151372054-151373071:+|nuORF 65.23502041540118 0.0228537820337083 1 EE{I|L}{I|L}GDG 7 3 60.934 0.0 0.0 5.4479 0.0 0.0 0.0 402.1431978815063 402.1431978815063 46.24175720442146 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.8494850021680094 0.0 + EE{I|L}{I|L}GDG 5.4479 + + 220 + 1 2.082 34943.0 1.0 2823 3428 6251 DOHH2_400M_050219_1,6253 DOHH2_400M_050219_1,6253,EELLGDGHSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6254 34.327 71.0 852670.0 25 0 51467.0 + 35367 STDPSVLGKY 10 81 533.7733462998347 1065.5321396664692 2 533.7745849490166 MULTI CID FTMS 0 0 0 6251 722563.3125 1.0 0 0.0 3 Unmodified _STDPSVLGKY_ ENSG00000114315|ENST00000232424|HES1 55.50274090549119 0.048383292844968 1 {[MG]|[TS]}DPSV{I|L}GKY 10 0 + 57.133 0.0 0.0 5.3619 5.3619 89.087 0.0 0.0 0.0 40.27568017640797 12.21848749616356 12.21848749616356 20.13363961557981 0 0.7302046884880937 0.0 0.4247425010840047 0.0 + + {[MG]|[TS]}DPSV{I|L}GKY;{[MG]|[TS]}DPSV[VP][PA]P;{[MG]|[TS]}DPS[R{I|L}]KY 5.3619;3.4724;3.2716 +;-;- + 211 + 1 2.082 50774.7 1.0 2824 3428 6251 DOHH2_400M_050219_1,6254 DOHH2_400M_050219_1,6254,STDPSVLGKY True True STDPSVLGKY 34.326504 533.774584949017 4176825.5 6251.0 ENSG00000114315|ENST00000232424|HES1 8.348079681396484 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6255 34.328 69.0 1043100.0 25 0 128410.0 + 5383 DLKQKVENL 9 92 543.8113125848255 1085.6080722364509 2 543.8116332888603 MULTI CID FTMS 0 0 0 6251 634127.5 1.0 0 0.0 4 Unmodified _DLKQKVENL_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 43.9818466556824 0.0535980856389242 1 D{I|L}KQ 4 5 64.285 0.0 0.0 5.9215 0.0 0.0 0.0 598.3214205377561 598.3214205377561 50.305168975722765 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.805462187404089 + D{I|L}KQ 5.9215 + + 135 + 1 2.082 57587.9 1.0 2825 3428 6251 DOHH2_400M_050219_1,6255 DOHH2_400M_050219_1,6255,DLKQKVENL True True DLKQKVENL 34.328152 543.81163328886 3140636.0 6251.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 4.593602498372396 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6256 34.33 77.0 797540.0 25 0 102490.0 + 36406 SYSRFCWLW 9 77 416.5280000489437 1246.5621707470311 3 416.5278198122978 MULTI CID FTMS 0 0 0 6251 578018.75 0.6109861093695724 -1 0.1003875732421875 5 Unmodified _SYSRFCWLW_ REV__ENST00000366911.9_1_6:161556936-161557113:-|nuORF 4.897010918128616 0.7437319958283661 1 HT{M(Oxidation (M))|F}[HC][MT] 7 -1 21.739 0.0 0.0 1.7439 0.0 0.0 371.2158375470719 0.0 371.2158375470719 0.0 7.134475811582632 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 HT{M(Oxidation (M))|F}[HC][MT] 1.7439 - 94 1 2.082 55566.0 1.0 2826 3428 6251 DOHH2_400M_050219_1,6256 DOHH2_400M_050219_1,6256,SYSRFCWLW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6257 34.332 78.0 652330.0 25 0 67255.0 10067 FPRQQLDL 8 73 508.7802562798004 1015.5459596264008 2 508.7801696658134 MULTI CID FTMS 0 0 0 6251 551473.5 0.6908495461893166 4 -0.4452857971191406 6 Unmodified _FPRQQLDL_ ENSG00000242419|ENST00000306593|PCDHGC4;nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4 12.531546534597751 0.7257836412119636 1 GTPE 4 8 36.186 0.0 0.0 3.5632 0.0 0.0 613.3559437482437 0.0 613.3559437482437 0.0 18.562287920263927 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 GTPE 3.5632 - 66 1 2.082 50173.8 1.0 2827 3428 6251 DOHH2_400M_050219_1,6257 DOHH2_400M_050219_1,6257,FPRQQLDL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6258 34.334 129.0 607580.0 25 0 62922.0 + 6930 EEFTHKDGVW 10 89 624.288462733008 1246.562372532816 2 624.2889282107353 MULTI CID FTMS 0 0 0 6251 471632.46875 0.7206107255850668 -1 0.1003875732421875 7 Unmodified _EEFTHKDGVW_ ENSG00000174231|ENST00000304992|PRPF8 51.76506608216692 0.0697913821149828 1 EE{M(Oxidation (M))|F}VVHT[NS]W 10 6 + 53.847 0.0 0.0 4.3196 4.3196 84.302 0.0 0.0 0.0 15.19550257945106 29.14197490877392 15.19550257945106 13.469100130080562 0 0.8494850021680094 1.5228787452803376 1.0 0.0 EE{M(Oxidation (M))|F}VVHT[NS]W;EE{M(Oxidation (M))|F}VVHQQ[MT];[HK][RD]T{M(Oxidation (M))|F}G[NS]GE;EE{[ET]|[MV]}HK[CS]V[VS];EE{M(Oxidation (M))|F}GYK{[QD]|[EN]|[WG]|[KD]|[RS]}[MT];{M(Oxidation (M))|F}R[CS][YT]WVW;{M(Oxidation (M))|F}GV[CS]R{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VW;[HK][RD]T{M(Oxidation (M))|F}G{M(Oxidation (M))|F}[HC];[HK][RD]T{M(Oxidation (M))|F}GEEE;[HK][RD]T{M(Oxidation (M))|F}EEGE 4.3196;3.2391;2.7072;2.5182;2.4875;2.4159;2.1935;2.06;1.9608;1.8742 -;-;-;-;-;-;-;-;-;- 600 1 2.082 63115.8 1.0 2828 3428 6251 DOHH2_400M_050219_1,6258 DOHH2_400M_050219_1,6258,EEFTHKDGVW True True EEFTHKDGVW 34.334352 624.288928210735 4343244.0 6251.0 ENSG00000174231|ENST00000304992|PRPF8 6.94852336247762 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6259 34.348 800.0 345170.0 25 0 42742.0 + 39611 VDNAYQCRSYD 11 150 667.2757002652693 1332.5368475973385 2 667.2761108279228 MULTI CID FTMS 0 0 0 6251 277697.90625 0.611537601581047 -1 0.1003875732421875 8 Unmodified _VDNAYQCRSYD_ REV__ENSG00000152990|ENST00000334304|ADGRA3;REV__ENST00000591780.1_1_18:12075195-12075588:-|nuORF;REV__nc|ENSG00000152990|Q8IWK6-2|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-3|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-4|ADGRA3 15.248480904072842 0.7179608125786238 1 [AG]NAGA{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y 13 -1 + 102.64 0.0 0.0 7.7023 7.7023 82.622 0.0 0.0 0.0 1.7798809824142978 47.54131140106979 1.7798809824142978 1.1060291325287182 0 1.2614393726401687 1.3010299956639813 1.385151878060192 2.5986198691406326 [AG]NAGA{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;[AG]NAQ{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;[AG]NA{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F}Y;[AG]NQA{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGA{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQ{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGA{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQA{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQ{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y 7.7023;7.6193;7.5628;7.4992;7.4605;7.3775;7.321;7.2665;7.2574;7.1857 -;-;-;-;-;-;-;-;-;- 7884 1 2.082 199267.2 0.9900000095367432 2829 3428 6251 DOHH2_400M_050219_1,6259 DOHH2_400M_050219_1,6259,VDNAYQCRSYD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6260 34.352 194.0 210400.0 25 0 12739.0 5413 DLLEYWFFP 9 84 410.5350962318236 1228.5834592956708 3 410.5356628298759 MULTI CID FTMS 0 0 0 6251 185691.609375 0.1287248914029619 2 -0.2181777954101562 9 Unmodified _DLLEYWFFP_ ENST00000554189.5_1_14:93180220-93180758:-|nuORF 4.75600775471527 0.7486543447549536 1 W 1 8 13.099 0.0 0.0 1.0662 0.0 0.0 1024.4933541704738 0.0 1024.4933541704738 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 1.0662 + + 18 + 1 2.082 38510.5 1.0 2830 3428 6251 DOHH2_400M_050219_1,6260 DOHH2_400M_050219_1,6260,DLLEYWFFP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6261 34.366 800.0 196020.0 25 0 11558.0 + 5421 EEAGRYLETY 10 145 615.2985529708077 1228.5825530084153 2 615.2996093630791 MULTI CID FTMS 0 0 0 6251 146435.9375 0.1291092786422871 2 -0.2181777954101562 10 Unmodified _DLLQQHANQY_ nc|ENSG00000012061|P07992-2|ERCC1;nc|ENSG00000012061|P07992-3|ERCC1;ENST00000592905.5_1_19:45918043-45926632:-|nuORF;ENSG00000012061|ENST00000300853|ERCC1;nc|ENSG00000012061|P07992-4|ERCC1 18.1463463914782 0.5430639438673815 1 D{I|L}AE{I|L}YNQT 9 6 65.912 0.0 0.0 5.3649 0.0 0.0 0.0 178.05144678287346 178.05144678287346 39.99475555211346 0.0 0.0 0.0 0 0.6237125054200234 2.0 0.2887254899964357 0.0 D{I|L}AE{I|L}YNQT 5.3649 - 2001 + 1 2.082 118490.8 0.699999988079071 2831 3428 6251 DOHH2_400M_050219_1,6261 DOHH2_400M_050219_1,6261,DLLQQHANQY False False EEAGRYLETY 34.365737 615.299609363079 183150.46875 6251.0 nc|ENSG00000012061|P07992-2|ERCC1;;nc|ENSG00000012061|P07992-3|ERCC1;;ENST00000592905.5_1_19:45918043-45926632:-|nuORF;;ENSG00000012061|ENST00000300853|ERCC1;;nc|ENSG00000012061|P07992-4|ERCC1 3.907232920328776 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6262 34.376 605.0 288460.0 25 0 24118.0 + 44265 YLKVRPDEI 9 129 566.8217860479142 1131.6290191626283 2 566.8216430544853 MULTI CID FTMS 0 0 0 6251 136156.046875 0.6963885876492735 -1 0.1003875732421875 11 Unmodified _YLKVRPDEI_ nc|ENSG00000108312|P17480-2|UBTF 59.36838082759317 0.0264317782606298 1 Y{I|L}KVR 5 4 77.563 0.0 0.0 6.8541 0.0 0.0 0.0 469.1944063776001 469.1944063776001 41.14848121939808 0.0 0.0 0.0 0 1.579689690656103 2.0 0.0 0.3807196863200844 + Y{I|L}KVR 6.8541 + + 905 + 1 2.082 134250.3 1.0 2832 3428 6251 DOHH2_400M_050219_1,6262 DOHH2_400M_050219_1,6262,YLKVRPDEI True True YLKVRPDEI 34.376321 566.821643054485 821574.6875 6251.0 nc|ENSG00000108312|P17480-2|UBTF 4.542798598607381 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6263 34.385 464.0 169660.0 25 0 23414.0 + 45268 YSDKYFDEHY 10 99 456.1911543768269 1365.5516337306808 3 456.1907531619072 MULTI CID FTMS 0 0 0 6251 125357.734375 0.0561848029260907 2 -0.2181777954101562 12 Unmodified _YSDKYFDEHY_ chr9:89311345-89315170|10|74.8|0.14|9.01|+|1|None,CKS2|1;ENSG00000123975|ENST00000314355|CKS2 28.23362336080872 0.3343390635154222 1 Y{M(Oxidation (M))|F}DEHY 6 4 31.349 0.0 0.0 2.2957 0.0 0.0 493.2150845525595 0.0 493.2150845525595 0.0 21.260781526086568 0.0 0.0 0 0.2742275032520141 0.0 0.6747425010840047 0.0 + Y{M(Oxidation (M))|F}DEHY 2.2957 + + 193 + 1 2.082 68411.5 1.0 2833 3428 6251 DOHH2_400M_050219_1,6263 DOHH2_400M_050219_1,6263,YSDKYFDEHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6264 34.398 800.0 114550.0 25 0 6416.3 + 24474 MIEPRTLQY 9 136 583.7972748355331 1165.5799967378662 2 583.7978393435478 MULTI CID FTMS 0 0 0 6251 89282.953125 0.0272591363020119 4 -0.4452857971191406 13 Oxidation (M) _M(Oxidation (M))IEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 63.960520009940105 0.0238892913700936 1 [VP]EW[HK]E{I|L}E 9 8 + 53.853 0.0 0.0 4.6203 4.6203 75.832 0.0 0.0 0.0 2.95880017344075 2.95880017344075 2.95880017344075 2.95880017344075 0 0.9247425010840048 1.3979400086720375 0.3252574989159953 0.7742275032520141 [VP]EW[HK]E{I|L}E;{M(Oxidation (M))|F}{I|L}E[NP]KKQY;[DP]{I|L}W[HK]E{I|L}E;{M(Oxidation (M))|F}{I|L}E[HK][KT]TY;{M(Oxidation (M))|F}{I|L}E[NP]KKYQ;H[Y{M(Oxidation (M))|F}]RRPQY;EE[RV][{M(Oxidation (M))|F}V]PQY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[VS][{I|L}A]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{M(Oxidation (M))|F}{I|L}E[QT]KKSW;EE[RV]{[ET]|[MV]}{I|L}QY 4.6203;4.3664;3.6572;3.527;3.4753;2.9505;2.8918;2.4269;2.3862;2.3069 -;-;-;-;-;-;-;-;-;- 668 1 2.082 72554.5 0.5600000023841858 2834 3428 6251 DOHH2_400M_050219_1,6264 DOHH2_400M_050219_1,6264,MIEPRTLQY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6265 34.403 174.0 339400.0 25 0 95880.0 28609 PVDTLPAL 8 73 413.2388644783535 824.463176023507 2 413.2389404177666 MULTI CID FTMS 0 0 0 6251 220311.0625 0.1657644476062423 -29 2.3013916015625 14 Unmodified _PVDTLPAL_ ENST00000367021.7_1_1:209974702-209979388:-|nuORF 10.183394434864962 0.7604730176254005 1 {I|L} 1 7 2.4743 0.0 0.0 0.3001 0.0 0.0 411.2367183592476 297.11094080142817 708.3476591606758 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.3001 + + 8 + 1 2.082 52829.4 1.0 2835 3428 6251 DOHH2_400M_050219_1,6265 DOHH2_400M_050219_1,6265,PVDTLPAL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6266 34.417 800.0 295440.0 25 0 24075.0 + -1 QNQYELFMEVM 11 151 732.3127214976103 1462.6108900620204 2 732.8113281130791 MULTI CID FTMS 0 0 0 6251 215824.8125 0.1235670811456265 -4 0.4504241943359375 15 2 Oxidation (M) _QNQYELFM(Oxidation (M))EVM(Oxidation (M))_ REV__ENSG00000152253|ENST00000282074|SPC25;REV__ENST00000479309.6_1_2:169690730-169745796:-|nuORF 13.042465956692816 0.7638483625850725 1 [AG]NHDEAQAGAN 12 -1 107.22 0.0 0.0 7.3305 0.0 0.0 0.0 324.12350748325406 324.12350748325406 73.70094716003551 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 1.2376954943324543 2.7856668758921828 [AG]NHDEAQAGAN 7.3305 - 63494 1 2.082 169555.9 0.7200000286102295 2836 3428 6251 DOHH2_400M_050219_1,6266 DOHH2_400M_050219_1,6266,QNQYELFMEVM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6267 34.421 186.0 267760.0 25 0 35166.0 + 83 AAGPRPMAL 9 80 442.24413297866926 882.4737130241385 2 442.2443115115166 MULTI CID FTMS 0 0 0 6251 151038.5 1.0 0 0.0 16 Unmodified _AAGPRPMAL_ ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42 38.15118350030904 0.0856056900103839 1 AA[W{I|L}]Y{M(Oxidation (M))|F}{I|L} 7 5 + 35.946 0.0 0.0 4.0733 4.0733 74.584 0.0 0.0 0.0 3.0799194697768684 3.0799194697768684 3.0799194697768684 3.0799194697768684 0 1.524227503252014 1.6989700043360187 0.0 0.0 AA[W{I|L}]Y{M(Oxidation (M))|F}{I|L};AAG{[QN]|[E{I|L}]|[KN]}[PA]AA{I|L};{[TV]|[{I|L}S]}K{I|L}Y{M(Oxidation (M))|F}{I|L};[QA]{[QN]|[E{I|L}]|[KN]}[PA]AA{I|L} 4.0733;3.7243;2.5657;1.2843 -;-;-;- 96 + 1 2.082 44113.0 1.0 2837 3428 6251 DOHH2_400M_050219_1,6267 DOHH2_400M_050219_1,6267,AAGPRPMAL True True AAGPRPMAL 34.420641 442.244311511517 909845.5 6251.0 ENSG00000126254|ENST00000262633|RBM42;;nc|ENSG00000126254|Q9BTD8-2|RBM42;;nc|ENSG00000126254|Q9BTD8-3|RBM42 2.895104413231214 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6268 34.434 800.0 116710.0 25 0 8140.9 -1 0 138 572.9726802340913 1715.8962113024736 3 573.3083984255791 MULTI CID FTMS 0 0 0 6251 127605.4921875 1.0 0 0.0 17 1 ND{I|L}R{I|L} 5 -1 13.711 0.0 0.0 0.79908 0.0 0.0 699.3556362065736 402.1926058404906 1101.5482420470644 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 ND{I|L}R{I|L} 0.79908 - 258 + 1 2.082 75872.9 0.550000011920929 2838 3428 6251 DOHH2_400M_050219_1,6268 DOHH2_400M_050219_1,6268, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6270 34.439 28.0 2138800.0 25 0 271680.0 + 719 AEPLPRNGDQW 11 59 641.8122467411393 1281.6099405490786 2 641.8128539919853 MULTI CID FTMS 0 0 0 6269 1903782.875 0.7999831391888846 1 -0.1025199890136718 1 Unmodified _AEPLPRNGDQW_ ENSG00000166483|ENST00000450114|WEE1;nc|ENSG00000166483|P30291-2|WEE1 30.7034409873982 0.3712764582118616 1 {[CP]|[EA]}P{I|L}P 5 6 29.208 0.0 0.0 2.279 0.0 0.0 0.0 771.3139132135374 771.3139132135374 15.422881389671655 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + {[CP]|[EA]}P{I|L}P 2.279 + + 69 + 1 2.082 50568.6 1.0 2839 3429 6269 DOHH2_400M_050219_1,6270 DOHH2_400M_050219_1,6270,AEPLPRNGDQW False True AEPLPRNGDQW 34.439293 641.812853991985 72079350.0 6269.0 nc|ENSG00000166483|P30291-2|WEE1;;ENSG00000166483|ENST00000450114|WEE1 8.316346327463785 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6271 34.443 194.0 350050.0 25 0 30090.0 + 38631 TTIKAFFPKK 10 83 590.8580204850276 1179.7014880368552 2 590.8585082888603 MULTI CID FTMS 0 0 0 6269 194462.578125 0.0626312348690896 2 -0.2091484069824218 2 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 32.78568957990786 0.2337485590374503 1 {[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK 9 4 + 69.901 0.0 0.0 5.9253 5.9253 93.172 0.0 0.0 0.0 52.46707224260248 16.720449851406514 16.720449851406514 69.90085961185265 0 1.805462187404089 0.0 0.0 0.3252574989159953 {[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK 5.9253 - 81 + 1 2.082 59093.2 1.0 2840 3429 6269 DOHH2_400M_050219_1,6271 DOHH2_400M_050219_1,6271,TTIKAFFPKK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6272 34.448 291.0 399950.0 25 0 23002.0 -1 0 80 910.9159092239933 1819.8172655147864 2 910.9172851443292 MULTI CID FTMS 0 0 0 6269 304715.40625 0.6116071016950503 -1 0.1156578063964843 3 1 EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 7 -1 54.825 0.0 0.0 3.0127 0.0 0.0 991.4741855308778 0.0 991.4741855308778 0.0 30.08864383480216 0.0 0.0 0 1.3807196863200843 0.0 0.805462187404089 0.4247425010840047 EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.0127 - 147 1 2.082 77872.8 1.0 2841 3429 6269 DOHH2_400M_050219_1,6272 DOHH2_400M_050219_1,6272, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6273 34.455 382.0 222440.0 25 0 16892.0 -1 0 82 918.4199753487844 1834.8253977643687 2 918.9211303591728 MULTI CID FTMS 0 0 0 6269 286431.25 0.2598661118803875 3 -0.3296279907226562 4 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DP]{I|L}NADQS[QP]Y{I|L}{[QS]|[NT]} 16 -1 + 67.481 0.0 0.0 3.6778 3.6778 71.833 0.0 0.0 0.0 2.083180127605345 2.083180127605345 2.083180127605345 2.083180127605345 0 0.9247425010840048 0.0 0.7302046884880937 0.6139829889124311 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DP]{I|L}NADQS[QP]Y{I|L}{[QS]|[NT]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}[DP]{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DP]{I|L}NWQS[QP]Y{I|L}{[QS]|[NT]};{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NADQS[QP]Y{I|L}{[QS]|[NT]};[NP]{I|L}NA[QP]SQDAN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}NA[QP]SQDAN{I|L}[HC][DV];[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NWQS[QP]Y{I|L}{[QS]|[NT]};[MT][HC]{I|L}NWQS[QP]Y{I|L}{[QS]|[NT]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QWN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.6778;3.5642;3.3121;3.2822;3.2722;3.1762;3.1687;2.9166;2.8206;2.803 -;-;-;-;-;-;-;-;-;- 1145 + 1 2.082 62049.0 1.0 2842 3429 6269 DOHH2_400M_050219_1,6273 DOHH2_400M_050219_1,6273, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6274 34.459 201.0 450290.0 25 0 21691.0 + 35380 STELNHLGY 9 117 517.2507487621668 1032.4869445911336 2 517.2514526247978 MULTI CID FTMS 0 0 0 6269 233275.0625 0.1005832501068514 -2 0.2160453796386718 5 Unmodified _STELNHLGY_ ENSG00000140983|ENST00000315082|RHOT2;ENST00000568636.5_1_16:720997-722003:+|nuORF;ENST00000569358.5_1_16:720997-722561:+|nuORF;ENST00000602564.5_1_16:720997-722561:+|nuORF 81.61307344734483 0.0171259190214613 1 {[MG]|[TS]}E{I|L}NH{I|L}GY 9 0 + 54.931 0.0 0.0 5.3203 5.3203 79.859 0.0 0.0 0.0 22.84009497292472 4.994039195269821 4.994039195269821 3.979400086720375 0 1.110924374808178 0.0 0.4247425010840047 0.6421590589602533 + + {[MG]|[TS]}E{I|L}NH{I|L}GY;{[MG]|[TS]}E{I|L}HN{I|L}GY;[H{I|L}]NE{I|L}G{[MG]|[TS]}Y;[H{I|L}]NE{I|L}GY{[MG]|[TS]};{[MG]|[TS]}EH{I|L}N{I|L}GY;{[MG]|[TS]}E{I|L}{[RE]|[WV]}SDP;[H{I|L}]N{I|L}EG{[MG]|[TS]}Y;[HN]{I|L}E{I|L}G{[MG]|[TS]}Y;[H{I|L}]NE{I|L}[MN]Y;[H{I|L}]N{I|L}EGY{[MG]|[TS]} 5.3203;4.9349;4.7218;4.5774;4.5111;4.356;4.2858;4.2681;4.1878;4.1413 +;-;-;-;-;-;-;-;-;- + 1013 + 1 2.082 72551.9 1.0 2843 3429 6269 DOHH2_400M_050219_1,6274 DOHH2_400M_050219_1,6274,STELNHLGY True True STELNHLGY 34.459122 517.251452624798 12675600.0 6269.0 ENST00000602564.5_1_16:720997-722561:+|nuORF;;ENSG00000140983|ENST00000315082|RHOT2;;ENST00000569358.5_1_16:720997-722561:+|nuORF;;ENST00000568636.5_1_16:720997-722003:+|nuORF 5.544137795766194 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6275 34.465 294.0 269420.0 25 0 31380.0 + 25139 MQKEITAL 8 110 467.25722714514274 932.4999013570856 2 467.2569457888603 MULTI CID FTMS 0 0 0 6269 232760.109375 1.0 0 0.0 6 Unmodified _MQKEITAL_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 24.020572477871973 0.5389365498350341 1 [R{M(Oxidation (M))|F}]SAT[PA]A{I|L} 9 6 [R{M(Oxidation (M))|F}] + + 24.844 1.0033 0.33093 2.6642 2.6642 49.749 0.0 0.0 0.0 0.0 15.695131663680044 0.0 0.0 0 0.4247425010840047 0.0 0.6307196863200843 0.0 [R{M(Oxidation (M))|F}]SAT[PA]A{I|L} 2.6642 - 373 + 1 2.082 66054.5 1.0 2844 3429 6269 DOHH2_400M_050219_1,6275 DOHH2_400M_050219_1,6275,MQKEITAL False True MQKEITAL 34.464503 467.25694578886 1386104.375 6269.0 ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000163017|ENST00000345517|ACTG2;;ENSG00000107796|ENST00000224784|ACTA2;;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;ENSG00000159251|ENST00000290378|ACTC1;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENSG00000075624|ENST00000646664|ACTB 2.415377418200175 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6276 34.469 228.0 447810.0 25 0 38356.0 + 25598 NFLEKRAL 8 112 495.7904129489948 989.5662729647896 2 495.7907287478447 MULTI CID FTMS 0 0 0 6269 216981.1875 0.3823664233788879 -1 0.1156578063964843 7 Unmodified _NFLEKRAL_ ENSG00000144354|ENST00000306721|CDCA7;ENST00000435616.5_1_2:174224078-174228757:+|nuORF;ENST00000496441.5_1_2:174219691-174228743:+|nuORF;nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1-4|CDCA7;nc|ENSG00000144354|Q9BWT1-5|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7 36.12702656103203 0.299085846329477 1 N{M(Oxidation (M))|F}{I|L}EK 5 3 49.112 0.0 0.0 4.963 0.0 0.0 0.0 355.21018396549067 355.21018396549067 38.27491040245479 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.4247425010840047 + N{M(Oxidation (M))|F}{I|L}EK 4.963 + + 208 + 1 2.082 81119.5 1.0 2845 3429 6269 DOHH2_400M_050219_1,6276 DOHH2_400M_050219_1,6276,NFLEKRAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6277 34.483 800.0 244620.0 25 0 21687.0 + 7074 EELLTDNRY 9 160 576.7795345066751 0 576.7809326052666 PEAK CID FTMS 0 0 0 6269 191400.71875 1.0 0 0.0 8 Unmodified _EELLTDNRY_ ENSG00000167881|ENST00000307877|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68 88.95385435242217 0.0132320582448001 1 {I|L}{I|L}TDN 5 4 54.477 0.0 0.0 4.7308 0.0 0.0 258.0840772083216 334.15217004947505 592.2362472577967 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.0501648626366045 1.0994850021680094 + {I|L}{I|L}TDN 4.7308 + + 255 + 1 2.082 147621.6 0.7900000214576721 2846 3429 6269 DOHH2_400M_050219_1,6277 DOHH2_400M_050219_1,6277,EELLTDNRY True True EELLTDNRY 34.482614 576.780932605267 1069764.25 6269.0 ENSG00000167881|ENST00000307877|SRP68;;nc|ENSG00000167881|Q9UHB9-2|SRP68 5.52689250310262 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6278 34.491 483.0 357510.0 25 0 50035.0 + 5281 DLAEHHMF 8 146 500.2212497497248 998.4279465662496 2 500.2219421267509 MULTI CID FTMS 0 0 0 6269 177521.515625 0.6225615368041608 -1 0.1156578063964843 9 Unmodified _DLAEHHMF_ ENSG00000065268|ENST00000585809|WDR18;ENST00000591276.1_1_19:990686-991256:+|nuORF 63.562846038646086 0.116059504757595 1 {NN|[MP]|[D{I|L}]|[EV]}AEHHM{M(Oxidation (M))|F} 8 0 + 71.31 0.0 0.0 7.1422 7.1422 94.564 0.0 0.0 0.0 47.15325193660596 13.214562785677655 13.214562785677655 19.57422829650359 0 1.5941876774005248 2.0 0.3252574989159953 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}AEHHM{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}HSY;{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}HSY;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}HYS;{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}HYS;{NN|[MP]|[D{I|L}]|[EV]}AEH{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}GP;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}A[NS]W{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}[NS]W{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}AQQM{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}QQM{M(Oxidation (M))|F} 7.1422;5.1817;5.0698;4.8853;4.7733;4.7059;4.692;4.58;4.4416;4.4293 +;-;-;-;-;-;-;-;-;- + 675 + 1 2.082 132274.0 1.0 2847 3429 6269 DOHH2_400M_050219_1,6278 DOHH2_400M_050219_1,6278,DLAEHHMF True True DLAEHHMF 34.491145 500.221942126751 1476377.25 6269.0 ENSG00000065268|ENST00000585809|WDR18;;ENST00000591276.1_1_19:990686-991256:+|nuORF 7.511970202128093 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6279 34.497 299.0 140530.0 25 0 10318.0 + 12494 GVAYVIHL 8 77 436.2555235506369 0 436.2559997439384 PEAK CID FTMS 0 0 0 6269 169024.3125 1.0 0 0.0 10 Unmodified _GVAYVIHL_ REV__ENST00000272224.4_1_2:20874358-20874706:+|nuORF 6.354104778181461 0.5763711549229614 1 P 1 -1 6.9897 0.0 0.0 0.80296 0.0 0.0 171.08935086312837 599.3235567682249 770.4129076313532 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.80296 - 4 + 1 2.082 43355.7 1.0 2848 3429 6269 DOHH2_400M_050219_1,6279 DOHH2_400M_050219_1,6279,GVAYVIHL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6280 34.51 800.0 94136.0 25 0 5483.2 + -1 CCWHFRCLCNE 11 98 821.313379326712 1640.612205720224 2 821.3124877810478 MULTI CID FTMS 0 0 0 6269 150825.078125 0.4434585170701211 2 -0.2091484069824218 11 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))WHFRC(Carbamidomethyl (C))LC(Carbamidomethyl (C))NE_ REV__ENSG00000115596|ENST00000233948|WNT6 0.3506318815782774 0.8734936314171269 1 YE{[ET]|[MV]} 4 -1 30.718 0.0 0.0 1.8724 0.0 0.0 1100.3900443029509 0.0 1100.3900443029509 0.0 12.04628427264403 0.0 0.0 0 1.0 0.0 1.3807196863200843 0.0 YE{[ET]|[MV]} 1.8724 - 193 + 1 2.082 58086.0 0.699999988079071 2849 3429 6269 DOHH2_400M_050219_1,6280 DOHH2_400M_050219_1,6280,CCWHFRCLCNE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6281 34.514 103.0 481190.0 25 0 45303.0 + -1 MLTYMDLI 8 77 508.2458966295783 1014.4772403259566 2 508.2458984255791 MULTI CID FTMS 0 0 0 6269 141150.765625 0.0419141261345556 3 -0.3296279907226562 12 Oxidation (M) _MLTYM(Oxidation (M))DLI_ REV__ENSG00000163157|ENST00000295314|TMOD4;REV__ENST00000463543.5_1_1:151143496-151146942:-|nuORF 10.183394434864962 0.7604730176254005 1 [TP]P 3 -1 16.911 0.0 0.0 1.667 0.0 0.0 0.0 716.3061337187878 716.3061337187878 2.3071313309657207 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [TP]P 1.667 - 46 1 2.082 46850.4 1.0 2850 3429 6269 DOHH2_400M_050219_1,6281 DOHH2_400M_050219_1,6281,MLTYMDLI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6282 34.518 188.0 432300.0 25 0 36919.0 -1 RRCNQCQPGFY 11 75 743.3240296456918 1484.6335063581837 2 743.3244506716728 MULTI CID FTMS 0 0 0 6269 131214.703125 0.3719488666592611 -1 0.1156578063964843 13 2 Carbamidomethyl (C) _RRC(Carbamidomethyl (C))NQC(Carbamidomethyl (C))QPGFY_ ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-2|USH2A;nc|ENSG00000042781|O75445-3|USH2A 6.2057823575117 0.8458686499021061 1 QHDEAQQNA{M(Oxidation (M))|F}Y 11 -1 75.637 0.0 0.0 5.0946 0.0 0.0 135.06855971504064 0.0 135.06855971504064 0.0 58.646939204142285 0.0 0.0 0 0.8935078169319297 0.0 0.3494850021680094 0.8494850021680094 QHDEAQQNA{M(Oxidation (M))|F}Y 5.0946 - 1701 1 2.082 62733.8 1.0 2851 3429 6269 DOHH2_400M_050219_1,6282 DOHH2_400M_050219_1,6282,RRCNQCQPGFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6283 34.523 296.0 249810.0 25 0 27353.0 12833 GVVALPKD 8 131 399.73859184063866 797.4626307480773 2 399.7383300662041 MULTI CID FTMS 0 0 0 6269 90386.421875 0.1779821613275791 -14 1.228252410888672 14 Unmodified _GVVALPKD_ ENSG00000141627|ENST00000675505|DYM;ENST00000583270.1_1_18:46623573-46623861:-|nuORF;nc|ENSG00000141627|Q7RTS9-2|DYM;nc|ENSG00000141627|Q7RTS9|DYM 2.889219685676258 0.8067950007271085 1 Y 1 8 11.99 0.0 0.0 1.5035 0.0 0.0 616.3884252810836 0.0 616.3884252810836 0.0 1.901056208558032 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5035 - 10 + 1 2.082 61608.3 1.0 2852 3429 6269 DOHH2_400M_050219_1,6283 DOHH2_400M_050219_1,6283,GVVALPKD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6284 34.537 800.0 198940.0 25 0 10416.0 + 43498 WWWWIWWQWW 10 133 874.9042007258124 1747.7938485184247 2 875.4049560427666 MULTI CID FTMS 0 0 0 6269 229953.875 0.0884989056647196 -5 0.5660820007324219 15 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 1 [NP]{I|L}NA[QP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 14 + 70.435 0.0 0.0 4.03 4.03 78.134 0.0 0.0 0.0 12.041650100754346 7.659167939666311 7.659167939666311 6.977437731477416 0 0.3807196863200844 0.8860566476931632 0.3807196863200844 0.7742275032520141 [NP]{I|L}NA[QP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NADT[WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA[QP]QDAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGA[QP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA[QP]QDAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA[QP][AG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP][YQ]TA[R{M(Oxidation (M))|F}]AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NS{[CP]|[EA]}[WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[Q{I|L}]TA[R{M(Oxidation (M))|F}]AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]EAKW[WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.03;3.6307;3.5142;3.5142;3.5142;3.5142;3.375;3.3476;3.341;3.2869 -;-;-;-;-;-;-;-;-;- 8419 1 2.082 110779.5 0.7300000190734863 2853 3429 6269 DOHH2_400M_050219_1,6284 DOHH2_400M_050219_1,6284,WWWWIWWQWW False True False False splicing PXD020620_cell_line DOHH2_400M_050219_1 6286 34.544 160.0 327660.0 25 0 15934.0 + 15181 DEALIGKKF 9 87 511.2637043906969 1020.5128558481938 2 511.2636291384697 MULTI CID FTMS 0 0 0 6285 178308.171875 0.1715946801591195 2 -0.2271080017089843 1 Unmodified _IPDSVSIQY_ ENSG00000173575|ENST00000394196|CHD2;nc|ENSG00000173575|O14647-2|CHD2;nc|ENSG00000173575|O14647-3|CHD2 13.50788311687929 0.4710407108020397 1 A{I|L}{I|L}VVVY 7 7 25.45 0.0 0.0 2.4938 0.0 0.0 245.01756883823128 0.0 245.01756883823128 0.0 9.138888702493585 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}{I|L}VVVY 2.4938 - 159 + 1 2.099 48208.0 1.0 2854 3430 6285 DOHH2_400M_050219_1,6286 DOHH2_400M_050219_1,6286,IPDSVSIQY False False DEALIGKKF 34.544059 511.26362913847 697848.0 6285.0 ENSG00000173575|ENST00000394196|CHD2;;nc|ENSG00000173575|O14647-2|CHD2;;nc|ENSG00000173575|O14647-3|CHD2 5.266744772593181 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6287 34.547 118.0 462720.0 25 0 56944.0 + 10430 FTDPRTMGY 9 75 544.2475233423628 1086.4804937515255 2 544.2477905154228 MULTI CID FTMS 0 0 0 6285 143178.84375 0.2646277469784003 2 -0.2271080017089843 2 Unmodified _FTDPRTMGY_ ENSG00000140650|ENST00000268261|PMM2;ENST00000567697.1_1_16:8904837-8941679:+|nuORF 24.020572477871973 0.2255576514309169 1 {M(Oxidation (M))|F}TD[TP][MN]VY 9 3 + 35.594 0.0 0.0 3.2761 3.2761 76.59 0.0 0.0 0.0 14.625299705980204 6.143937264016877 6.143937264016877 7.781512503836431 0 0.3252574989159953 0.0 0.0 0.0 {M(Oxidation (M))|F}TD[TP][MN]VY;{M(Oxidation (M))|F}TD[TP]{[WT]|[RM]}GY;{M(Oxidation (M))|F}T[C(Carbamidomethyl (C))R]{[{M(Oxidation (M))|F}H]|[RQ]}GY;{M(Oxidation (M))|F}TD[TP][YN]{[ET]|[MV]} 3.2761;2.5599;2.1257;1.2063 -;-;-;- 73 + 1 2.099 46181.0 1.0 2855 3430 6285 DOHH2_400M_050219_1,6287 DOHH2_400M_050219_1,6287,FTDPRTMGY False True FTDPRTMGY 34.546519 544.247790515423 4910457.5 6285.0 ENST00000567697.1_1_16:8904837-8941679:+|nuORF;;ENSG00000140650|ENST00000268261|PMM2 6.12295134862264 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6288 34.549 90.0 1218000.0 25 0 216730.0 + 14347 IESTTQLESL 10 97 374.1973708573517 1119.5702831722551 3 374.1974670290947 MULTI CID FTMS 0 0 0 6285 514103.4375 1.0 0 0.0 3 Unmodified _IESTTQLESL_ REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000461872.6_1_6:152697909-152949466:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-10|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-7|SYNE1;REV__SYNE1|p.A1982Sfs*14|1|0.3|ENSG00000131018|chr6:152416493-152416494|-/T|frameshift_variant 55.50274090549119 0.048383292844968 1 [{I|L}T]C(Carbamidomethyl (C)){[RE]|[WV]}{I|L}ES{I|L} 9 -1 + 48.159 0.0 0.0 4.3015 4.3015 77.463 0.0 0.0 0.0 0.7378621416091846 28.42145952513228 0.7378621416091846 5.255762612236907 0 0.6989700043360187 0.0 1.6861818737241734 0.3494850021680094 [{I|L}T]C(Carbamidomethyl (C)){[RE]|[WV]}{I|L}ES{I|L};[{I|L}T]C(Carbamidomethyl (C)){[RE]|[WV]}{I|L}TD{I|L};[{I|L}T][CG]{[RE]|[WV]}{I|L}ES{I|L};[{I|L}T][CG]{[RE]|[WV]}{I|L}TD{I|L};[{I|L}T]Y[NP][{I|L}A]ES{I|L};[{M(Oxidation (M))|F}V]ER[NP]Y[VP];[{I|L}T]Y[NP][{I|L}A]TD{I|L};[{M(Oxidation (M))|F}V]E[VG][NP]Y[VP];[{M(Oxidation (M))|F}V]T[PS][NP]Y[VP];{[MS]|[{M(Oxidation (M))|F}A]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YT]Y[VP] 4.3015;3.8321;3.479;3.0096;2.8319;2.5059;2.3624;1.6834;1.4145;0.85853 -;-;-;-;-;-;-;-;-;- 433 1 2.099 93253.5 1.0 2856 3430 6285 DOHH2_400M_050219_1,6288 DOHH2_400M_050219_1,6288,IESTTQLESL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6289 34.55 83.0 729430.0 25 0 65322.0 + 32897 SEINKPNFY 9 76 556.2745072131323 1110.5344614930646 2 556.2752563357353 MULTI CID FTMS 0 0 0 6285 480228.1875 0.1607257696361257 -1 0.1025199890136718 4 Unmodified _SEINKPNFY_ ENSG00000067334|ENST00000436063|DNTTIP2 39.957323273325 0.0756908302845263 1 {[ES]|[DT]|[{I|L}C]}{I|L}NK[NP]{M(Oxidation (M))|F}Y 9 0 + 46.163 0.0 0.0 4.1568 4.1568 81.408 0.0 0.0 0.0 10.59385934535718 14.09256854528806 10.59385934535718 9.208187539523747 0 0.8252574989159953 0.0 0.0 0.3807196863200844 + + {[ES]|[DT]|[{I|L}C]}{I|L}NK[NP]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}GGK[NP]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}NK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]};{[ES]|[DT]|[{I|L}C]}{I|L}GGK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]};[QA]AE[QP]KP{[QD]|[EN]|[WG]|[KD]|[RS]};{[ES]|[DT]|[{I|L}C]}{I|L}[TP][QP]P{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]AEK[QP]P{[QD]|[EN]|[WG]|[KD]|[RS]};{[ES]|[DT]|[{I|L}C]}{I|L}[TP][QP]W[PG];[QA]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]} 4.1568;3.3276;2.7097;1.8805;1.0701;0.93803;0.91157;0.86673;0.27812 +;-;-;-;-;-;-;-;- + 460 + 1 2.099 51486.0 1.0 2857 3430 6285 DOHH2_400M_050219_1,6289 DOHH2_400M_050219_1,6289,SEINKPNFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6290 34.552 87.0 634640.0 25 0 63565.0 + 44914 YPPPHQVF 8 93 492.7504948151479 983.4864366970958 2 492.7505676150322 MULTI CID FTMS 0 0 0 6285 445041.34375 0.875679780126412 2 -0.2271080017089843 5 Unmodified _YPPPHQVF_ ENSG00000076248|ENST00000242576|UNG;ENST00000540158.1_1_12:109535484-109537104:+|nuORF;nc|ENSG00000076248|P13051-2|UNG 24.67388899826682 0.525179942228231 1 YPPP[H{I|L}]N{M(Oxidation (M))|F} 8 2 + 53.81 0.0 0.0 5.4714 5.4714 87.0 0.0 0.0 0.0 37.69077524932108 3.900925144087779 3.900925144087779 9.262137858390815 0 0.4247425010840047 2.0 0.0 0.0 YPPP[H{I|L}]N{M(Oxidation (M))|F};YPPP[H{I|L}]GG{M(Oxidation (M))|F};YP[KC]P[YT]{I|L};YPP[KC][YT]{I|L};YP[YV]V{[QC]|[C(Carbamidomethyl (C))A]}{I|L};[{I|L}V][WM]PP{[QN]|[E{I|L}]|[KN]};Y[YK][H{I|L}]N{M(Oxidation (M))|F};Y[YV]VP{[QC]|[C(Carbamidomethyl (C))A]}{I|L};[HQ]PV[YV]{[QN]|[E{I|L}]|[KN]};Y[YV]PV{[QC]|[C(Carbamidomethyl (C))A]}{I|L} 5.4714;4.5296;4.1958;3.7107;3.3365;1.8373;1.2388;1.1182;0.60192;0.56496 -;-;-;-;-;-;-;-;-;- 291 + 1 2.099 50179.6 1.0 2858 3430 6285 DOHH2_400M_050219_1,6290 DOHH2_400M_050219_1,6290,YPPPHQVF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6291 34.556 167.0 418150.0 25 0 48363.0 40122 VGLGLPAQ 8 111 377.7256505671082 753.4367482010164 2 377.7250549197197 MULTI CID FTMS 0 0 0 6285 296574.09375 0.9989249083082778 1 -0.10662841796875 6 Unmodified _VGLGLPAQ_ ENST00000590335.1_1_19:45974100-45974211:+|nuORF 2.889219685676258 0.8067950007271085 1 G 1 7 9.3971 0.0 0.0 1.2472 0.0 0.0 678.4041839693742 0.0 678.4041839693742 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 1.2472 + + 39 + 1 2.099 58902.6 1.0 2859 3430 6285 DOHH2_400M_050219_1,6291 DOHH2_400M_050219_1,6291,VGLGLPAQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6292 34.559 157.0 387260.0 25 0 69355.0 + + -1 YLDYDDTRY 9 59 612.2696886333393 1222.5248243334786 2 612.2632324099541 MULTI CID FTMS 0 0 0 6285 284426.46875 0.1956232132730791 -6 0.6686019897460938 7 Carbamidomethyl (C) _LYDFIETC(Carbamidomethyl (C))Y_ ENST00000535343.5_1_12:132632219-132636084:+|nuORF;ENSG00000184967|ENST00000330579|NOC4L 16.942295170755138 0.3780752226737986 1 Y{I|L}DYDDTRY 9 -1 + 82.573 0.0 0.0 6.7543 6.7543 83.396 0.0 0.0 0.0 36.47817481888637 11.938200260161125 11.938200260161125 3.0102999566398125 0 0.0 2.0 0.0 0.0 Y{I|L}DYDDTRY;Y{I|L}YDDDTRY;Y{I|L}DYDDY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};Y{I|L}YDDDY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};Y{I|L}DYD[R{M(Oxidation (M))|F}][MT];Y{I|L}DYD[YV]{[WS]|[C(Carbamidomethyl (C)){I|L}]};Y{I|L}YDD[R{M(Oxidation (M))|F}][MT];Y{I|L}YDD[YV]{[WS]|[C(Carbamidomethyl (C)){I|L}]};Y{I|L}Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[C(Carbamidomethyl (C))S]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};Y{I|L}Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[KC]{[WS]|[C(Carbamidomethyl (C)){I|L}]} 6.7543;6.5081;5.7778;5.5315;4.4255;4.3233;4.1793;4.0771;2.5662;2.3993 -;-;-;-;-;-;-;-;-;- 223 + 1 2.099 52292.4 1.0 2860 3430 6285 DOHH2_400M_050219_1,6292 DOHH2_400M_050219_1,6292,LYDFIETCY False False YLDYDDTRY 34.558738 612.263232409954 1149248.875 6285.0 ENST00000535343.5_1_12:132632219-132636084:+|nuORF;;ENSG00000184967|ENST00000330579|NOC4L 8.235961755116781 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6293 34.573 800.0 182220.0 25 0 12927.0 -1 0 125 925.4287734794144 1848.8429940256285 2 925.4298583865166 MULTI CID FTMS 0 0 0 6285 221893.9375 0.6053860780247069 1 -0.10662841796875 8 1 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAG[HV][Y{M(Oxidation (M))|F}]{I|L}SQ 16 -1 + 84.546 0.0 0.0 4.5729 4.5729 73.81 0.0 0.0 0.0 1.4481416862542176 1.4481416862542176 1.4481416862542176 1.4481416862542176 0 2.1237125054200234 0.0 1.4559771852360797 1.4291746928241125 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAG[HV][Y{M(Oxidation (M))|F}]{I|L}SQ;[NP]{I|L}N{M(Oxidation (M))|F}A[HV]GAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]AGAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}A[RH]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NESAHSAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEQ[HV][Y{M(Oxidation (M))|F}]{I|L}SQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEK[HV][Y{M(Oxidation (M))|F}]{I|L}SQ;[NP]{I|L}N{M(Oxidation (M))|F}A[HV]QEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]AQEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.5729;4.4946;4.4946;4.4579;4.4579;4.3849;4.21;4.21;4.1308;4.1308 -;-;-;-;-;-;-;-;-;- 12685 + 1 2.099 97185.6 0.8100000023841858 2861 3430 6285 DOHH2_400M_050219_1,6293 DOHH2_400M_050219_1,6293, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6294 34.586 800.0 274450.0 25 0 18773.0 + 36929 TEVDSRWQEY 10 154 656.7944349299128 1311.5743169266254 2 656.7941772341728 MULTI CID FTMS 0 0 0 6285 158807.8125 1.0 0 0.0 9 Unmodified _TEVDSRWQEY_ ENSG00000127603|ENST00000564288|MACF1;ENST00000485063.1_1_1:39748843-39749872:+|nuORF;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1 94.90867108109512 0.0089818344207408 1 TEVD[DP]{M(Oxidation (M))|F}AKQY 11 6 + 91.415 0.0 0.0 6.9699 6.9699 92.374 0.0 0.0 0.0 58.0600095279413 14.1901669181796 14.1901669181796 10.940910616566851 0 1.4489700043360187 1.6989700043360187 0.6109243748081782 1.5189301784845295 TEVD[DP]{M(Oxidation (M))|F}AKQY;TEVD[DP]{M(Oxidation (M))|F}AKAGY;TEVDSRH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD;TEVDC(Carbamidomethyl (C))C(Carbamidomethyl (C))KKSW;TEVDSC(Carbamidomethyl (C))M{[QN]|[E{I|L}]|[KN]}[KT];TEVDSC(Carbamidomethyl (C))[YK]VPD;TEVD[DP]{M(Oxidation (M))|F}VVEY;TEVDS[WH][Y{I|L}]Y;TE[HA]WC{M(Oxidation (M))|F}KQY;TEY[KC]C{M(Oxidation (M))|F}KQY 6.9699;6.1357;5.8253;5.6907;5.5856;5.5025;5.3222;5.2017;5.1339;5.0386 -;-;-;-;-;-;-;-;-;- 5392 + 1 2.099 161873.5 0.7300000190734863 2862 3430 6285 DOHH2_400M_050219_1,6294 DOHH2_400M_050219_1,6294,TEVDSRWQEY True True TEVDSRWQEY 34.586419 656.794177234173 732136.0 6285.0 ENSG00000127603|ENST00000564288|MACF1;;nc|ENSG00000127603|Q9UPN3-2|MACF1;;ENST00000485063.1_1_1:39748843-39749872:+|nuORF;;nc|ENSG00000127603|Q9UPN3|MACF1;;nc|ENSG00000127603|Q9UPN3-3|MACF1;;nc|ENSG00000127603|Q9UPN3-4|MACF1 6.985451062520345 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6295 34.594 437.0 283120.0 25 0 14154.0 + -1 KEMLPSYHKW 10 129 440.225136044045 439.217859577445 1 440.2256042361259 MULTI CID FTMS 0 0 0 6285 146444.703125 1.0 0 0.0 10 ENST00000477069.5_1_9:131747266-131765892:+|nuORF;ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188 1 Y 1 -1 15.485 0.0 0.0 3.5255 0.0 0.0 258.1437761807638 0.0 258.1437761807638 0.0 0.5630250076728753 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.5255 - 57 + 1 2.099 104850.0 1.0 2863 3430 6285 DOHH2_400M_050219_1,6295 DOHH2_400M_050219_1,6295, False False KEMLPSYHKW 34.594188 440.225604236126 1066211.25 6285.0 ENST00000477069.5_1_9:131747266-131765892:+|nuORF;;ENSG00000095319|ENST00000372577|NUP188;;nc|ENSG00000095319|Q5SRE5-2|NUP188 7.293947378794352 3.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6296 34.599 247.0 323810.0 25 0 81964.0 35327 SSWPTSPGLRW 11 82 637.3183164648453 1272.6220799964906 2 637.3196288943291 MULTI CID FTMS 0 0 0 6285 120242.3125 0.8126794548658967 -1 0.1025199890136718 11 Unmodified _SSWPTSPGLRW_ ENSG00000147481|ENST00000642720|SNTG1;nc|ENSG00000147481|Q9NSN8-2|SNTG1 12.240655878213236 0.7805268987462184 1 WW 2 9 19.464 0.0 0.0 1.5294 0.0 0.0 0.0 897.4165133111936 897.4165133111936 0.3868585339084163 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WW 1.5294 - 28 + 1 2.099 62284.1 1.0 2864 3430 6285 DOHH2_400M_050219_1,6296 DOHH2_400M_050219_1,6296,SSWPTSPGLRW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6297 34.608 502.0 176970.0 25 0 12799.0 + 7234 EERSSYLEY 9 128 588.2626017559616 1174.510650578723 2 588.2660400271416 MULTI CID FTMS 0 0 0 6285 124966.15625 0.8581790517557734 -2 0.2181777954101562 12 Unmodified _EERSSYLEY_ ENSG00000136824|ENST00000374793|SMC2;nc|ENSG00000136824|O95347-2|SMC2 26.268140514670165 0.1969607489560049 1 G[QT]{I|L}EY 6 6 40.125 0.0 0.0 3.4163 0.0 0.0 465.19810683418126 0.0 465.19810683418126 0.0 27.360352775282344 0.0 0.0 0 0.8252574989159953 0.0 1.1861818737241734 0.0 G[QT]{I|L}EY 3.4163 - 474 1 2.099 71543.6 1.0 2865 3430 6285 DOHH2_400M_050219_1,6297 DOHH2_400M_050219_1,6297,EERSSYLEY False True EERSSYLEY 34.607671 588.266040027142 1539914.125 6285.0 ENSG00000136824|ENST00000374793|SMC2;;nc|ENSG00000136824|O95347-2|SMC2 4.406080325444539 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6298 34.623 800.0 204750.0 25 0 17791.0 + 9588 FLLSRQGAA 9 152 481.7749355235522 961.5353181139044 2 481.7752258181572 MULTI CID FTMS 0 0 0 6285 106297.703125 0.779770930462466 -1 0.1025199890136718 13 Unmodified _FLKHITGF_ ENST00000597416.1_1_19:18194215-18197732:-|nuORF;ENSG00000096996|ENST00000593993|IL12RB1;nc|ENSG00000096996|P42701-3|IL12RB1;nc|ENSG00000096996|P42701-2|IL12RB1 32.116972079565 0.368454113111938 1 {[TV]|[{I|L}S]}R[MT]{I|L}{I|L}E 8 7 + 46.889 0.0 0.0 4.8765 4.8765 78.859 0.0 0.0 0.0 4.544997999353456 5.847653568423532 4.544997999353456 4.544997999353456 0 0.805462187404089 0.8239087409443188 0.4247425010840047 0.3494850021680094 {[TV]|[{I|L}S]}R[MT]{I|L}{I|L}E;[{I|L}T]MRS{I|L}{I|L}E;D{I|L}K[TP]{I|L}{I|L}Y;D{I|L}KAA[Q{I|L}]G{M(Oxidation (M))|F};D{I|L}K[TP]{I|L}Y{I|L};{M(Oxidation (M))|F}{I|L}{I|L}S[HK]A{M(Oxidation (M))|F};D{I|L}K[{I|L}V]D{I|L}{M(Oxidation (M))|F};{M(Oxidation (M))|F}{I|L}{I|L}SRMVP;D{I|L}K[KS]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};D{I|L}KAA[YK]GP 4.8765;4.4038;3.8302;3.7877;3.7799;3.4082;3.39;3.2338;3.128;2.8393 -;-;-;-;-;-;-;-;-;- 345 1 2.099 126507.3 0.4900000095367431 2866 3430 6285 DOHH2_400M_050219_1,6298 DOHH2_400M_050219_1,6298,FLKHITGF False False FLLSRQGAA 34.622661 481.775225818157 681476.0625 6285.0 ENST00000597416.1_1_19:18194215-18197732:-|nuORF;;ENSG00000096996|ENST00000593993|IL12RB1;;nc|ENSG00000096996|P42701-3|IL12RB1;;nc|ENSG00000096996|P42701-2|IL12RB1 3.910435597101847 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6299 34.625 102.0 499760.0 25 0 42723.0 + 518 AEHLGEMNRQW 11 90 457.5471376076167 1369.6195834230502 3 457.5474120974541 MULTI CID FTMS 0 0 0 6285 99820.9609375 0.227675767152051 -1 0.1025199890136718 14 Unmodified _AEHLGEMNRQW_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 51.629811660486645 0.1086041609037681 1 {[YC]|[HE]}A[HK]M 6 8 29.398 0.0 0.0 2.1464 0.0 0.0 0.0 633.263670868467 633.263670868467 6.544387449636204 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.7742275032520141 0.7742275032520141 {[YC]|[HE]}A[HK]M 2.1464 - 520 1 2.099 47623.3 1.0 2867 3430 6285 DOHH2_400M_050219_1,6299 DOHH2_400M_050219_1,6299,AEHLGEMNRQW True True AEHLGEMNRQW 34.624842 457.547412097454 3158221.125 6285.0 ENST00000394768.6_2_14:64542710-64692241:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2;;nc|ENSG00000054654|Q8WXH0-7|SYNE2 6.088119983673096 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6300 34.63 268.0 352010.0 25 0 37510.0 + 15317 IPLKPSNEL 9 115 505.797574937033 1009.580596940866 2 505.7979614138603 MULTI CID FTMS 0 0 0 6285 96557.40625 0.2799290772688497 -2 0.2181777954101562 15 Unmodified _IPLKPSNEL_ ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2 32.78568957990786 0.1150597335874693 1 {I|L}P{I|L}KCVN 7 4 61.062 0.0 0.0 6.0483 0.0 0.0 0.0 239.10384546451408 239.10384546451408 40.48918221526151 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.2614393726401688 {I|L}P{I|L}KCVN 6.0483 - 398 + 1 2.099 75132.1 1.0 2868 3430 6285 DOHH2_400M_050219_1,6300 DOHH2_400M_050219_1,6300,IPLKPSNEL True True IPLKPSNEL 34.629792 505.79796141386 3091861.0 6285.0 nc|ENSG00000136108|Q8WWK9-4|CKAP2;;nc|ENSG00000136108|Q8WWK9-6|CKAP2;;ENSG00000136108|ENST00000258607|CKAP2;;nc|ENSG00000136108|Q8WWK9|CKAP2 4.650966723759969 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6301 34.644 800.0 109870.0 25 0 31203.0 -1 0 30 1191.1409973951097 3570.401162785529 3 1191.474414050579 MULTI CID FTMS 0 0 0 6285 165347.3125 0.9667211893465636 -1 0.1025199890136718 16 1 E 1 -1 6.9897 0.0 0.0 0.19577 0.0 0.0 2914.1739913695365 524.1614473932249 3438.335438762761 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19577 - 3 + 1 2.099 81001.9 0.4699999988079071 2869 3430 6285 DOHH2_400M_050219_1,6301 DOHH2_400M_050219_1,6301, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6303 34.649 85.0 522000.0 25 0 44374.0 + 10095 FPTSQRLPA 9 77 508.7802562798004 1015.5459596264008 2 508.7801391482353 MULTI CID FTMS 0 0 0 6302 445663.75 0.5582980858382661 7 -0.8459091186523438 1 Unmodified _FPTSQRLPA_ ENST00000399831.7_1_8:38965091-38975631:+|nuORF 18.1463463914782 0.3454829746528889 1 AGTPE 5 7 46.766 0.0 0.0 4.605 0.0 0.0 542.3195057599625 0.0 542.3195057599625 0.0 33.667053245199625 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 AGTPE 4.605 - 73 1 2.108 41347.4 1.0 2870 3431 6302 DOHH2_400M_050219_1,6303 DOHH2_400M_050219_1,6303,FPTSQRLPA False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6304 34.653 205.0 377070.0 25 0 28235.0 + 38629 TTIKAFFPKK 10 111 394.2412834865837 1179.7020210599512 3 394.2414428591728 MULTI CID FTMS 0 0 0 6302 261976.71875 0.0209135781937572 4 -0.528167724609375 2 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 26.268140514670165 0.3785003716575977 1 TT{I|L}KY{I|L}WKK 9 4 + 92.942 0.0 0.0 7.8784 7.8784 91.097 0.0 0.0 0.0 82.21639407645036 17.230749808046326 17.230749808046326 9.080758529268849 0 1.1861818737241734 1.5228787452803376 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK;TT{I|L}KY{I|L}{[NV]|[RG]}TK 7.8784;7.1087 -;- 186 + 1 2.108 66056.5 1.0 2871 3431 6302 DOHH2_400M_050219_1,6304 DOHH2_400M_050219_1,6304,TTIKAFFPKK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6305 34.655 26.0 2553600.0 25 0 639750.0 + 45274 YSDKYGLGY 9 90 533.2478662087896 1064.481179484379 2 533.2484008669853 MULTI CID FTMS 0 0 0 6302 1729607.5 0.0763128008256006 -1 0.10662841796875 3 Unmodified _YSDKYGLGY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 66.45667989310934 0.0225072657982126 1 YSDKYG{I|L}GY 9 0 + 75.94 0.0 0.0 7.134 7.134 94.268 0.0 0.0 0.0 31.67226875575465 14.973024840566469 14.973024840566469 17.703037561203843 0 2.0356668758921828 1.6989700043360187 0.0 0.0 + + YSDKYG{I|L}GY;YSDKY{[QV]|[N{I|L}]|[RA]|[KV]}Y;YSD[RH][PA]GY;Y[HT]{I|L}GS[PA]GY;YS[HT][QP]{I|L}GY;YS[HT]{I|L}G[PA]GY;YS[HT][PA]G{I|L}GY;[HT]Y{I|L}GKD[MT];YS[HT]{I|L}[QP]GY;Y[HT]{I|L}GKD[MT] 7.134;5.4709;5.1124;5.0371;4.8986;4.8735;4.8557;4.8026;4.708;4.6864 +;-;-;-;-;-;-;-;-;- + 1415 + 1 2.108 55873.7 1.0 2872 3431 6302 DOHH2_400M_050219_1,6305 DOHH2_400M_050219_1,6305,YSDKYGLGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6306 34.656 69.0 754900.0 25 0 85583.0 + + 23853 VLDKDDRRLLSY 12 48 498.2757372173502 0 498.2756225466728 PEAK CID FTMS 0 0 0 6302 540506.125 0.8178694119076767 -1 0.10662841796875 4 Unmodified _LVIGDRHW_ nc|ENSG00000087269|P78316-2|NOP14;ENSG00000087269|ENST00000416614|NOP14 14.581692164780916 0.4900557725783909 1 D 1 -1 6.9897 0.0 0.0 0.70281 0.0 0.0 73.03235514371029 803.452478119192 876.4848332629024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.70281 + + 5 + 1 2.108 47973.4 1.0 2873 3431 6302 DOHH2_400M_050219_1,6306 DOHH2_400M_050219_1,6306,LVIGDRHW False False VLDKDDRRLLSY 34.656135 498.275622546673 4741498.3125 6302.0 nc|ENSG00000087269|P78316-2|NOP14;;ENSG00000087269|ENST00000416614|NOP14 8.522802670796713 3.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6307 34.659 130.0 621100.0 25 0 61198.0 -1 QNCRSMDRFSF 11 90 732.3127214976103 1462.6108900620204 2 732.3137084841728 MULTI CID FTMS 0 0 0 6302 421735.875 0.1828830378811483 -1 0.10662841796875 5 Carbamidomethyl (C),Oxidation (M) _QNC(Carbamidomethyl (C))RSM(Oxidation (M))DRFSF_ ENSG00000197892|ENST00000524189|KIF13B 8.155526934196011 0.8366696279279818 1 [AG]NNHEAQQNA{M(Oxidation (M))|F}Y 13 -1 + 86.247 0.0 0.0 5.8968 5.8968 82.622 0.0 0.0 0.0 10.409586076789054 11.448658907276354 10.409586076789054 4.60850931587035 0 1.1122731327798547 1.5228787452803376 0.3807196863200844 1.5044321917401078 [AG]NNHEAQQNA{M(Oxidation (M))|F}Y;[AG]GGNHEAQQNA{M(Oxidation (M))|F}Y;[AG]NNHEA[AG]QNA{M(Oxidation (M))|F}Y;[AG]NNHEAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]NNHEAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}NHEAQQNA{M(Oxidation (M))|F}Y;[AG]NAQ[HD]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GNHEAQQNA{M(Oxidation (M))|F}Y;[AG]GGNHEAQQGGA{M(Oxidation (M))|F}Y;[AG]GGNHEAQ[AG]NA{M(Oxidation (M))|F}Y 5.8968;5.5817;5.2765;5.2765;5.2765;5.1851;5.1821;5.1072;4.963;4.963 -;-;-;-;-;-;-;-;-;- 1055 1 2.108 62281.9 1.0 2874 3431 6302 DOHH2_400M_050219_1,6307 DOHH2_400M_050219_1,6307,QNCRSMDRFSF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6308 34.662 154.0 289590.0 25 0 28291.0 + -1 DSDMQTLVY 9 83 544.2333538291749 1086.4521547251495 2 544.2328979372978 MULTI CID FTMS 0 0 0 6302 292150.53125 1.0 0 0.0 6 Oxidation (M) _DSDM(Oxidation (M))QTLVY_ ENSG00000149823|ENST00000279281|VPS51 25.399314129420983 0.2080152500878129 1 VY 2 -1 20.969 0.0 0.0 1.9301 0.0 0.0 806.3094067776873 0.0 806.3094067776873 0.0 -4.370762361577299 -4.370762361577299 0.0 0 0.0 0.0 0.0 0.0 VY 1.9301 + + 65 + 1 2.108 42026.6 1.0 2875 3431 6302 DOHH2_400M_050219_1,6308 DOHH2_400M_050219_1,6308,DSDMQTLVY False False DSDMQTLVY 34.661863 544.232897937298 1546914.625 6302.0 ENSG00000149823|ENST00000279281|VPS51 6.178850809733073 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6309 34.664 126.0 800590.0 25 0 107620.0 + 43969 YIDDRGFRY 9 83 402.19645084236026 1203.5675231272808 3 402.1962158083916 MULTI CID FTMS 0 0 0 6302 264319.71875 0.1109763706821294 -1 0.10662841796875 7 Unmodified _YIDDRGFRY_ ENSG00000149418|ENST00000278742|ST14 20.580933911654288 0.2795815587326093 1 Y{I|L}DDR 5 4 58.756 0.0 0.0 4.8818 0.0 0.0 0.0 538.2417696588499 538.2417696588499 45.12833360198201 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3807196863200844 + Y{I|L}DDR 4.8818 + + 106 + 1 2.108 81384.2 1.0 2876 3431 6302 DOHH2_400M_050219_1,6309 DOHH2_400M_050219_1,6309,YIDDRGFRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6310 34.668 159.0 462980.0 25 0 25358.0 + 30579 RESDQLFKQY 10 81 657.3280449456707 1312.6415369581414 2 657.3291503787041 MULTI CID FTMS 0 0 0 6302 264922.875 1.0 0 0.0 8 Unmodified _RESDQLFKQY_ ENSG00000168234|ENST00000317571|TTC39C;ENST00000578150.1_1_18:21594913-21660647:+|nuORF;nc|ENSG00000168234|Q8N584-3|TTC39C 42.312485326615175 0.1331477410672653 1 {[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}{M(Oxidation (M))|F}KQY 10 3 + 68.945 0.0 0.0 5.2524 5.2524 84.319 0.0 0.0 0.0 5.496812376923046 50.89892921248609 5.496812376923046 9.164539485499256 0 1.5044321917401078 0.0 0.4247425010840047 0.4247425010840047 {[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}{M(Oxidation (M))|F}KQY;{[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}{M(Oxidation (M))|F}K[AG]Y;{[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]{I|L}{M(Oxidation (M))|F}KQY;{[HG]|PP}DK[YQ]{M(Oxidation (M))|F}KQY;{[ET]|[MV]}[Q{I|L}][SG]{I|L}{M(Oxidation (M))|F}KQY;{[HG]|PP}DK{M(Oxidation (M))|F}[SG]{M(Oxidation (M))|F}KQY;{[HG]|PP}DK{M(Oxidation (M))|F}[YQ]KQY;[YQ][RH][SG]{M(Oxidation (M))|F}KQY;[PS]{[WT]|[RM]}[SG]{I|L}{M(Oxidation (M))|F}KQY;{[HG]|PP}[YN][SG]{I|L}{M(Oxidation (M))|F}KQY 5.2524;4.5542;4.5542;3.9293;3.8662;3.7053;3.5853;3.5577;3.5028;3.3686 -;-;-;-;-;-;-;-;-;- 488 1 2.108 60363.2 1.0 2877 3431 6302 DOHH2_400M_050219_1,6310 DOHH2_400M_050219_1,6310,RESDQLFKQY False True RESDQLFKQY 34.667596 657.329150378704 3256620.625 6302.0 ENSG00000168234|ENST00000317571|TTC39C;;ENST00000578150.1_1_18:21594913-21660647:+|nuORF;;nc|ENSG00000168234|Q8N584-3|TTC39C 6.005046685536702 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6311 34.672 212.0 350500.0 25 0 16894.0 + 26410 NTDPSIVMTY 10 111 578.7626791231091 1155.5108053130182 2 578.7627441287041 MULTI CID FTMS 0 0 0 6302 243672.453125 0.4520540626968945 -1 0.10662841796875 9 Oxidation (M) _NTDPSIVM(Oxidation (M))TY_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF 114.6490535036381 0.0010974644385814 1 {[QS]|[NT]}D[TP]VV 7 5 49.798 0.0 0.0 4.3096 0.0 0.0 0.0 426.1324574367382 426.1324574367382 19.13180601660436 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 1.860924374808178 0.75 {[QS]|[NT]}D[TP]VV 4.3096 - 521 1 2.108 60628.6 1.0 2878 3431 6302 DOHH2_400M_050219_1,6311 DOHH2_400M_050219_1,6311,NTDPSIVMTY True False NTDPSIVMTY 34.671623 578.762744128704 3635650.5 6302.0 ENST00000426186.1_3_2:87098444-87121919:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 8.15380303064982 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6312 34.675 193.0 330120.0 25 0 32852.0 + 30580 RESDQLFKQY 10 95 438.5550145200775 1312.6432141604323 3 438.5551940798759 MULTI CID FTMS 0 0 0 6302 241518.765625 1.0 0 0.0 10 Unmodified _RESDQLFKQY_ ENSG00000168234|ENST00000317571|TTC39C;ENST00000578150.1_1_18:21594913-21660647:+|nuORF;nc|ENSG00000168234|Q8N584-3|TTC39C 49.52724829834842 0.0829255630816734 1 KETP{I|L}RY 7 7 28.492 0.0 0.0 2.1706 0.0 0.0 407.151589259845 0.0 407.151589259845 0.0 5.814564340635471 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 KETP{I|L}RY 2.1706 - 403 + 1 2.108 56858.5 1.0 2879 3431 6302 DOHH2_400M_050219_1,6312 DOHH2_400M_050219_1,6312,RESDQLFKQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6313 34.678 158.0 463720.0 25 0 84099.0 + 14247 IEALQKAG 8 84 415.2422743603401 828.4699957874801 2 415.2421447634697 MULTI CID FTMS 0 0 0 6302 195603.78125 1.0 0 0.0 11 Unmodified _IEALQKAG_ ENSG00000068650|ENST00000375645|ATP11A;ENST00000459908.5_1_13:113439469-113512287:+|nuORF 20.453626601364224 0.6087503291685402 1 {I|L}EA{I|L}E[RV] 7 4 + 58.989 0.0 0.0 7.1202 7.1202 92.497 0.0 0.0 0.0 46.22490683973748 2.97950971637551 2.97950971637551 10.516609670558594 0 0.805462187404089 2.0 0.0 0.0 {I|L}EA{I|L}E[RV];{I|L}EV[DV][RV];{I|L}EAT{[TV]|[{I|L}S]}VP;{I|L}EV{[TV]|[{I|L}S]}[TA]P;{I|L}VE[DV][RV];{I|L}V[DV]E[RV];{I|L}VE{[TV]|[{I|L}S]}[TA]P;{I|L}V[NS]K[TA]P 7.1202;5.8508;4.5346;4.49;2.5607;1.834;1.1999;0.26062 -;-;-;-;-;-;-;- 131 + 1 2.108 60796.4 1.0 2880 3431 6302 DOHH2_400M_050219_1,6313 DOHH2_400M_050219_1,6313,IEALQKAG False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6314 34.682 208.0 277970.0 25 0 22646.0 + 32977 SEMNTDKQYF 10 90 631.7710104548102 1261.5274679764202 2 631.7722656130791 MULTI CID FTMS 0 0 0 6302 192537.1875 0.940749137533252 1 -0.1204795837402343 12 Unmodified _SEMNTDKQYF_ ENSG00000169251|ENST00000351193|NMD3;ENST00000439704.1_1_7:63369621-63370485:-|nuORF 16.149105407346934 0.5765757077271437 1 Y{M(Oxidation (M))|F} 2 8 19.949 0.0 0.0 1.5813 0.0 0.0 933.3847200289578 0.0 933.3847200289578 0.0 8.528516934974935 0.0 0.0 0 0.5 0.0 0.0 0.0 + Y{M(Oxidation (M))|F} 1.5813 + + 24 + 1 2.108 52201.8 1.0 2881 3431 6302 DOHH2_400M_050219_1,6314 DOHH2_400M_050219_1,6314,SEMNTDKQYF False True SEMNTDKQYF 34.682421 631.772265613079 1387007.75 6302.0 ENSG00000169251|ENST00000351193|NMD3;;ENST00000439704.1_1_7:63369621-63370485:-|nuORF 3.236820101737976 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6315 34.696 800.0 147360.0 25 0 10037.0 + 519 AEHLGEMNRQW 11 116 685.8175161578032 1369.6204793824063 2 686.3198730349541 MULTI CID FTMS 0 0 0 6302 135294.734375 1.0 0 0.0 13 Unmodified _AEHLGEMNRQW_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 49.52724829834842 0.1202481389936634 1 {[YC]|[HE]}A[HK]MEG{I|L} 9 8 58.949 0.0 0.0 4.304 0.0 0.0 0.0 334.11767885324633 334.11767885324633 36.016828929868865 0.0 0.0 0.0 0 1.1307196863200843 1.154901959985743 0.75 0.75 {[YC]|[HE]}A[HK]MEG{I|L} 4.304 - 872 1 2.108 89305.8 0.699999988079071 2882 3431 6302 DOHH2_400M_050219_1,6315 DOHH2_400M_050219_1,6315,AEHLGEMNRQW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6316 34.704 412.0 288430.0 25 0 19687.0 + -1 SEQTGKELLY 10 157 583.7972748355331 1165.5799967378662 2 584.2992431521416 MULTI CID FTMS 0 0 0 6302 129442.578125 0.0641126794179131 7 -0.8459091186523438 14 Carbamidomethyl (C) _AKISEQLC(Carbamidomethyl (C))AF_ ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY 20.41453444215458 0.5050059513928961 1 {[QN]|[E{I|L}]|[KN]}KGTQC{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 10 -1 + 56.176 0.0 0.0 4.8196 4.8196 78.718 0.0 0.0 0.0 9.514163661669144 0.7918124604762511 0.7918124604762511 4.726890629795548 0 0.0 0.8239087409443188 0.9802046884880936 0.75 {[QN]|[E{I|L}]|[KN]}KGTQC{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QN]|[E{I|L}]|[KN]}KGTQ{I|L}C{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QN]|[E{I|L}]|[KN]}KGT{I|L}QC{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QN]|[E{I|L}]|[KN]}KGTQ{I|L}Y{[QS]|[NT]};{[QN]|[E{I|L}]|[KN]}KGT[AG]C{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[QT]VVTQC{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[AG]TVVTQC{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QN]|[E{I|L}]|[KN]}KGT{I|L}QY{[QS]|[NT]};[AG][VS]{I|L}TQC{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[QT][VS]{I|L}QC{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.8196;4.414;4.1969;4.135;4.0333;4.0033;3.9242;3.9179;3.7464;3.7001 -;-;-;-;-;-;-;-;-;- 5085 1 2.108 90504.7 1.0 2883 3431 6302 DOHH2_400M_050219_1,6316 DOHH2_400M_050219_1,6316,AKISEQLCAF False False SEQTGKELLY 34.703613 584.299243152142 2189541.25 6302.0 ENSG00000131473|ENST00000352035|ACLY;;nc|ENSG00000131473|P53396-2|ACLY;;nc|ENSG00000131473|P53396-3|ACLY 7.233210722605388 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6317 34.709 295.0 226140.0 25 0 11069.0 + 30583 RESPNITDRW 10 103 425.2145531516376 1272.621830055113 3 425.2143737673759 MULTI CID FTMS 0 0 0 6302 125505.859375 1.0 0 0.0 15 Unmodified _RESPNITDRW_ ENSG00000196305|ENST00000443024|IARS1;ENST00000472894.1_1_9:95018893-95021273:-|nuORF 15.738622578938676 0.5834632108994704 1 {I|L}TDRW 5 5 20.118 0.0 0.0 1.5809 0.0 0.0 583.2705860139005 0.0 583.2705860139005 0.0 7.354051268129762 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}TDRW 1.5809 + + 126 + 1 2.108 60834.2 1.0 2884 3431 6302 DOHH2_400M_050219_1,6317 DOHH2_400M_050219_1,6317,RESPNITDRW False True RESPNITDRW 34.709014 425.214373767376 1711196.0 6302.0 ENSG00000196305|ENST00000443024|IARS1;;ENST00000472894.1_1_9:95018893-95021273:-|nuORF 2.452524979909261 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6318 34.717 461.0 274190.0 25 0 27835.0 + 6850 EEDYRTLTNY 10 149 652.2940508604008 1302.5735487876016 2 652.2946655154228 MULTI CID FTMS 0 0 0 6302 126895.84375 0.36521279189627 -1 0.10662841796875 16 Unmodified _EEDYRTLTNY_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 110.79276546118962 0.0021709591033222 1 EER{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}TNY 10 5 + 73.773 0.0 0.0 5.6636 5.6636 79.056 0.0 0.0 0.0 42.58068336749366 15.026975159433526 15.026975159433526 2.4551266781414967 0 1.1861818737241734 1.5228787452803376 0.2887254899964357 1.0941876774005248 EER{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}TNY;EEVG{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}TNY;[TP]DT{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}TNY;EER{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}TGGY;EEVG{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}TGGY;EE{[SA]|[TG]}HP[KQ]TNY;[TP]DCHP[KQ]TNY;[TP]DT{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}TGGY;[WH]TEP[KQ]TNY;[{I|L}T][YR]TDEENY 5.6636;5.4752;4.826;4.7635;4.3432;4.1626;4.0286;3.9286;3.6123;3.5464 -;-;-;-;-;-;-;-;-;- 3016 + 1 2.108 97105.8 1.0 2885 3431 6302 DOHH2_400M_050219_1,6318 DOHH2_400M_050219_1,6318,EEDYRTLTNY True True EEDYRTLTNY 34.717208 652.294665515423 1009839.0625 6302.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 8.776687145233154 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6319 34.732 800.0 229290.0 25 0 13724.0 + 25566 NEVYEAVKNY 10 156 614.7955929531923 0 614.7955810427666 PEAK CID FTMS 0 0 0 6302 113260.4453125 1.0 0 0.0 17 Unmodified _NEVYEAVKNY_ ENSG00000163939|ENST00000707071|PBRM1;ENST00000480064.1_1_3:52643285-52649409:-|nuORF;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 55.23464941255904 0.0308208844230662 1 D{I|L}NSEE 6 9 29.036 0.0 0.0 2.3653 0.0 0.0 328.2222151038471 209.05686365299064 537.2790787568377 0.0 0.0 0.0 0.0 0 0.0 0.0 1.214559192431053 0.9634679910804403 D{I|L}NSEE 2.3653 - 460 + 1 2.108 136270.4 0.6299999952316284 2886 3431 6302 DOHH2_400M_050219_1,6319 DOHH2_400M_050219_1,6319,NEVYEAVKNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6320 34.74 431.0 268780.0 25 0 12683.0 + 442 AEFEKIQKL 9 132 553.3154183635032 1104.6162837938064 2 553.3160278201103 MULTI CID FTMS 0 0 0 6302 106502.7578125 1.0 0 0.0 18 Unmodified _AEFEKIQKL_ ENSG00000138617|ENST00000649807|PARP16;nc|ENSG00000138617|Q8N5Y8-3|PARP16 74.19965305603844 0.0194755241623067 1 AE{M(Oxidation (M))|F}EK{I|L}QK{I|L} 9 0 + 87.481 0.0 0.0 7.9196 7.9196 85.703 0.0 0.0 0.0 36.478174818886366 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 1.8098943791441968 2.0 0.0 0.9361818737241734 + + AE{M(Oxidation (M))|F}EK{I|L}QK{I|L};AE{M(Oxidation (M))|F}EK{I|L}Q{I|L}K;AE{M(Oxidation (M))|F}EK{I|L}[AG]K{I|L};AE{M(Oxidation (M))|F}EK{I|L}[AG]{I|L}K;A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KEEQK{I|L};A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KEEQ{I|L}K;{[CP]|[EA]}{M(Oxidation (M))|F}EK{I|L}Q[K{I|L}];A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}QK{I|L};A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K[R{M(Oxidation (M))|F}]NP{I|L};A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}Q{I|L}K 7.9196;7.6471;7.086;6.8135;3.1634;2.8909;2.3215;2.2776;2.1681;2.0051 +;-;-;-;-;-;+;-;-;- + 833 + 1 2.108 90025.9 1.0 2887 3431 6302 DOHH2_400M_050219_1,6320 DOHH2_400M_050219_1,6320,AEFEKIQKL True True AEFEKIQKL 34.739906 553.31602782011 618550.625 6302.0 ENSG00000138617|ENST00000649807|PARP16;;nc|ENSG00000138617|Q8N5Y8-3|PARP16 5.165416876475017 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6321 34.754 800.0 275520.0 25 0 14326.0 -1 VCYARIYRCLQ 11 189 751.371936968265 1500.72932100333 2 751.3710204958916 MULTI CID FTMS 0 0 0 6302 103885.15625 0.4774465883715492 -1 0.10662841796875 19 2 Carbamidomethyl (C) _VC(Carbamidomethyl (C))YARIYRC(Carbamidomethyl (C))LQ_ ENSG00000204174|ENST00000374312|NPY4R 22.736283301280096 0.5583477779825423 1 PN{I|L}NEAQ[{I|L}A]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 13 -1 + 114.25 0.0 0.0 7.6127 7.6127 83.701 0.0 0.0 0.0 7.825834421237516 9.63029595722496 7.825834421237516 1.8708664335714504 0 2.3807196863200843 1.3979400086720375 0.6139829889124311 2.2407789281008856 PN{I|L}NEAQ[{I|L}A]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;PN{I|L}NEARRE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;NP{I|L}NEAQ[{I|L}A]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[NP]{I|L}NEP[Y{I|L}]PG{M(Oxidation (M))|F}{I|L}Q;NP{I|L}NEARRE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[NP]{I|L}NEP[TP][MT]{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NEP[TP][EC]{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}G[PG]G{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[NP]G{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NEP[TP]A[NP]P{I|L}Q 7.6127;7.488;7.0912;6.971;6.9666;6.8715;6.8715;6.6806;6.6375;6.5926 -;-;-;-;-;-;-;-;-;- 12407 + 1 2.108 159444.4 0.6200000047683716 2888 3431 6302 DOHH2_400M_050219_1,6321 DOHH2_400M_050219_1,6321,VCYARIYRCLQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6322 34.764 536.0 114960.0 25 0 8828.8 + + 19325 HIIAGAGEL 9 97 440.9138483859024 1319.7197157579074 3 440.9141113162041 MULTI CID FTMS 0 0 0 6302 103416.2734375 1.0 0 0.0 20 Unmodified _LELWINTLRY_ ENSG00000167658|ENST00000309311|EEF2 5.783430956126388 0.6998847395148697 1 [H{I|L}]{I|L}QAGE 7 -1 40.934 0.0 0.0 3.1018 0.0 0.0 0.0 568.3071540726136 568.3071540726136 16.158197815704085 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [H{I|L}]{I|L}QAGE 3.1018 - 119 1 2.108 57346.8 1.0 2889 3431 6302 DOHH2_400M_050219_1,6322 DOHH2_400M_050219_1,6322,LELWINTLRY False False HIIAGAGEL 34.764345 440.914111316204 400363.1875 6302.0 ENSG00000167658|ENST00000309311|EEF2 3.441007216771444 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6324 34.769 29.0 1550600.0 25 0 266610.0 + + 13890 YTDKIMTY 8 87 517.2507487621668 1032.4869445911336 2 517.2514526247978 MULTI CID FTMS 0 0 0 6323 382846.65625 0.1650753430970168 1 -0.1666793823242187 1 Unmodified _HVQEYLTSG_ nc|ENSG00000076685|P49902-2|NT5C2;ENSG00000076685|ENST00000404739|NT5C2 13.042465956692816 0.4836390050082244 1 [YT][QT]{I|L}YT[SG] 9 -1 + 35.224 0.0 0.0 3.4115 3.4115 80.81 0.0 0.0 0.0 5.839220584157665 4.601190938230324 4.601190938230324 11.13331607598376 0 0.0 1.6989700043360187 1.2302046884880935 0.0 [YT][QT]{I|L}YT[SG];[TP][{M(Oxidation (M))|F}V]MT{I|L}QP;[TP][{M(Oxidation (M))|F}V]M{I|L}TQP;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}TY{[{M(Oxidation (M))|F}C]|[YS]}[SG];AAT{I|L}TY{[{M(Oxidation (M))|F}C]|[YS]}[SG];{[QD]|[EN]|[WG]|[KD]|[RS]}T[YV]YT[SG];AATT[YV]YT[SG];[TP][{M(Oxidation (M))|F}V]MT{I|L}[AG]P;{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}Y{[{M(Oxidation (M))|F}C]|[YS]}[SG];[TP]{NN|[MP]|[D{I|L}]|[EV]}{I|L}[NP]TY 3.4115;2.3332;2.0417;2.0194;1.8984;1.5846;1.4636;1.4414;1.4128;1.3108 -;-;-;-;-;-;-;-;-;- 494 1 2.101 38264.5 1.0 2890 3432 6323 DOHH2_400M_050219_1,6324 DOHH2_400M_050219_1,6324,HVQEYLTSG False False YTDKIMTY 34.768991 517.251452624798 10763810.0 6323.0 nc|ENSG00000076685|P49902-2|NT5C2;;ENSG00000076685|ENST00000404739|NT5C2 5.593083381652832 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6325 34.773 212.0 366300.0 25 0 25809.0 -1 0 84 910.9159092239933 1819.8172655147864 2 910.9173461794852 MULTI CID FTMS 0 0 0 6323 358154.78125 0.7188675177743404 2 -0.2802200317382812 2 1 QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 21.973 0.0 0.0 1.2074 0.0 0.0 734.370897361525 0.0 734.370897361525 0.0 1.082268588648251 0.0 0.0 0 1.211758134947864 0.0 0.4247425010840047 0.0 QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 1.2074 - 158 1 2.101 58582.3 1.0 2891 3432 6323 DOHH2_400M_050219_1,6325 DOHH2_400M_050219_1,6325, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6326 34.775 64.0 1387600.0 25 0 266590.0 + 43971 YIDDRGFRY 9 66 602.7908969382266 1203.5672409432532 2 602.7910034060478 MULTI CID FTMS 0 0 0 6323 831360.0625 1.0 0 0.0 3 Unmodified _YIDDRGFRY_ ENSG00000149418|ENST00000278742|ST14 40.72490554402381 0.0714771638475563 1 Y{I|L}DDR 5 4 78.047 0.0 0.0 6.4847 0.0 0.0 0.0 538.2440889947874 538.2440889947874 57.562893943202624 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.4247425010840047 1.305462187404089 + Y{I|L}DDR 6.4847 + + 64 + 1 2.101 70189.4 1.0 2892 3432 6323 DOHH2_400M_050219_1,6326 DOHH2_400M_050219_1,6326,YIDDRGFRY True True YIDDRGFRY 34.77461 602.791003406048 36589264.5 6323.0 ENSG00000149418|ENST00000278742|ST14 6.934006849924724 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6327 34.777 103.0 676440.0 25 0 65518.0 + 32930 SELEKIQKF 9 95 374.5452963729731 1120.6140597191193 3 374.5448791384697 MULTI CID FTMS 0 0 0 6323 329340.03125 1.0 0 0.0 4 Unmodified _SELEKIQKF_ ENSG00000172244|ENST00000306862|C5orf34 41.8396318013385 0.0653578398400075 1 {[ES]|[DT]|[{I|L}C]}{I|L}EK{I|L}QK{M(Oxidation (M))|F} 9 0 + 41.278 0.0 0.0 3.6835 3.6835 79.464 0.0 0.0 0.0 20.55980542871953 12.25268461881508 12.25268461881508 9.208187539523742 0 0.3494850021680094 0.0 0.5 0.3054621874040891 + + {[ES]|[DT]|[{I|L}C]}{I|L}EK{I|L}QK{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}EK{I|L}[AG]K{M(Oxidation (M))|F} 3.6835;2.8618 +;- + 183 + 1 2.101 60906.2 1.0 2893 3432 6323 DOHH2_400M_050219_1,6327 DOHH2_400M_050219_1,6327,SELEKIQKF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6328 34.784 372.0 252420.0 25 0 18778.0 + 38607 TTEESLRNYY 10 105 638.2956633647581 1274.576773796316 2 638.2963134646416 MULTI CID FTMS 0 0 0 6323 229239.0 1.0 0 0.0 5 Unmodified _TTEESLRNYY_ ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1 74.19965305603844 0.0188013450058842 1 TTEES{I|L}[RN]YY 10 0 + 91.433 0.0 0.0 7.1736 7.1736 86.757 0.0 0.0 0.0 33.52182518111363 5.210889290378404 5.210889290378404 5.210889290378404 0 1.1307196863200843 1.6989700043360187 0.4247425010840047 0.7742275032520141 + + TTEES{I|L}[RN]YY;TTEES{I|L}[RN]N[DP];TTEES{I|L}[RN]GG[DP];TTEES{I|L}[EP]W[PS];TTEESQQ[KS][HT];TTE{[QS]|[NT]}[RP]SW[PS];[PS]G{M(Oxidation (M))|F}[EP]{I|L}SEE[PS];[PS]{[WT]|[RM]}[KQ]SEE[PS];T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W{I|L}[RN]YY;[VG][MT][EP]{I|L}SEE[PS] 7.1736;6.7648;5.7744;5.4328;4.9033;4.0566;3.5419;3.2127;2.8127;2.7731 +;-;-;-;-;-;-;-;-;- + 660 + 1 2.101 72657.2 1.0 2894 3432 6323 DOHH2_400M_050219_1,6328 DOHH2_400M_050219_1,6328,TTEESLRNYY True True TTEESLRNYY 34.783516 638.296313464642 823411.75 6323.0 ENSG00000122566|ENST00000618183|HNRNPA2B1;;nc|ENSG00000122566|P22626|HNRNPA2B1;;ENST00000463181.5_1_7:26232138-26237376:-|nuORF 8.409801006317139 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6329 34.789 318.0 223990.0 25 0 13360.0 + 8518 ETEESNLNMY 10 93 615.2532831044141 1228.492013275628 2 615.2526122927666 MULTI CID FTMS 0 0 0 6323 166641.203125 1.0 0 0.0 6 Unmodified _ETEESNLNMY_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000519124.5_1_8:124382257-124392860:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2 27.628801355627647 0.3479284626772844 1 EEW{I|L}[MN]NMY 9 4 + 36.918 0.0 0.0 3.0052 3.0052 80.983 0.0 0.0 0.0 9.6111116337581 5.829603656700215 5.829603656700215 15.4794656189555 0 1.7870156338638594 1.154901959985743 0.7887254899964358 0.0 EEW{I|L}[MN]NMY;[DP]{I|L}[MT][MN]NMY;[DP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WE]NMY;[MN]{[QN]|[E{I|L}]|[KN]}[WE]NMY;{[QD]|[EN]|[WG]|[KD]|[RS]}V{[QS]|[NT]}[MN]NMY;[DP]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QD]|[EN]|[WG]|[KD]|[RS]}NMY;{[QV]|[N{I|L}]|[RA]|[KV]}D{[QS]|[NT]}[MN]NMY;{[QD]|[EN]|[WG]|[KD]|[RS]}D[KA][MN]NMY;{[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WE]NMY 3.0052;1.7451;1.6377;1.5803;1.408;1.4026;1.163;1.1085;0.8068 -;-;-;-;-;-;-;-;- 155 1 2.101 55605.5 1.0 2895 3432 6323 DOHH2_400M_050219_1,6329 DOHH2_400M_050219_1,6329,ETEESNLNMY False True ETEESNLNMY 34.78931 615.252612292767 1459921.875 6323.0 ENST00000521903.5_1_8:124361561-124413087:-|nuORF;;nc|ENSG00000156802|Q6PL18-2|ATAD2;;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;;ENSG00000156802|ENST00000287394|ATAD2;;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;;ENST00000519124.5_1_8:124382257-124392860:-|nuORF 5.360508759816487 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6330 34.795 317.0 241500.0 25 0 37980.0 + 7994 EMFPKTSV 8 104 469.73650480171045 0 469.7366515994072 PEAK CID FTMS 0 0 0 6323 152391.875 1.0 0 0.0 7 Unmodified _EMFPKTSV_ ENSG00000171940|ENST00000371471|ZNF217 13.90604991867851 0.4976509803484061 1 {M(Oxidation (M))|F}P 2 6 10.886 0.0 0.0 1.1612 0.0 0.0 260.0807233711959 430.2320955865844 690.3128189577803 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {M(Oxidation (M))|F}P 1.1612 + + 32 + 1 2.101 64275.2 1.0 2896 3432 6323 DOHH2_400M_050219_1,6330 DOHH2_400M_050219_1,6330,EMFPKTSV False True EMFPKTSV 34.795077 469.736651599407 841829.625 6323.0 ENSG00000171940|ENST00000371471|ZNF217 5.9920148849487305 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6331 34.809 800.0 224400.0 25 0 19568.0 + 571 AEINENNVREF 11 156 667.8204415648838 1333.6263301965676 2 667.8207885622978 MULTI CID FTMS 0 0 0 6323 148351.109375 0.3865874175987491 -1 0.1204795837402343 8 Unmodified _AEINENNVREF_ ENSG00000151332|ENST00000416007|MBIP;nc|ENSG00000151332|Q9NS73-2|MBIP;nc|ENSG00000151332|Q9NS73-3|MBIP;nc|ENSG00000151332|Q9NS73-5|MBIP 128.86945502625275 0.0503664432907914 1 {[CP]|[EA]}{I|L}NENNVRE{M(Oxidation (M))|F} 11 0 + 100.1 0.0 0.0 7.5061 7.5061 83.685 0.0 0.0 0.0 5.593185481980598 2.027095528662869 2.027095528662869 2.027095528662869 0 2.278659694992122 0.0 1.0387254899964358 2.193672679568534 + + {[CP]|[EA]}{I|L}NENNVRE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}NENNV{M(Oxidation (M))|F}VW;{[CP]|[EA]}{I|L}NENGGVRE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}NEGGNVRE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}GGENNVRE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}GGENNV{M(Oxidation (M))|F}VW;{[CP]|[EA]}{I|L}NEGGNV{M(Oxidation (M))|F}VW;{[CP]|[EA]}{I|L}NENGGV{M(Oxidation (M))|F}VW;{[CP]|[EA]}{I|L}GGEGGNV{M(Oxidation (M))|F}VW;{[CP]|[EA]}{I|L}NENN[YT]{I|L}[PG] 7.5061;7.3541;6.8216;6.8216;6.8216;6.6696;6.6696;6.4531;5.9874;5.9236 +;-;-;-;-;-;-;-;-;- + 13167 + 1 2.101 135568.5 0.7099999785423279 2897 3432 6323 DOHH2_400M_050219_1,6331 DOHH2_400M_050219_1,6331,AEINENNVREF True True AEINENNVREF 34.808918 667.820788562298 2489365.25 6323.0 nc|ENSG00000151332|Q9NS73-2|MBIP;;nc|ENSG00000151332|Q9NS73-5|MBIP;;nc|ENSG00000151332|Q9NS73-3|MBIP;;ENSG00000151332|ENST00000416007|MBIP 8.400330543518066 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6332 34.817 474.0 317350.0 25 0 38631.0 + 20265 LLDQGQLNKY 10 137 596.3222449050177 1190.6299368768352 2 596.3243896365166 MULTI CID FTMS 0 0 0 6323 142160.96875 0.1566781707127142 -1 0.1204795837402343 9 Unmodified _LLDQGQLNKY_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 134.295615338601 0.0002091370085671 1 {I|L}{I|L}DQGQ{I|L}NKY 10 0 + 126.69 0.0 0.0 10.641 10.641 91.562 0.0 0.0 0.0 36.53212513775344 6.989700043360188 6.989700043360188 6.989700043360188 0 1.3494850021680094 2.0 0.3494850021680094 3.059894379144197 + + {I|L}{I|L}DQGQ{I|L}NKY;{I|L}{I|L}DQGQ{I|L}NYK;{I|L}{I|L}DQG[AG]{I|L}NKY;{I|L}{I|L}D[AG]GQ{I|L}NKY;{I|L}{I|L}DQGQ{I|L}GGKY;{I|L}{I|L}DQG[AG]{I|L}NYK;{I|L}{I|L}D[AG]GQ{I|L}NYK;{I|L}{I|L}DQGQ{I|L}GGYK;{I|L}{I|L}D[AG]GQ{I|L}GGKY;{I|L}{I|L}DQG[AG]{I|L}GGKY 10.641;10.054;9.8712;9.8712;9.8712;9.2841;9.2841;9.2841;9.1045;9.1045 +;-;-;-;-;-;-;-;-;- + 3913 + 1 2.101 113341.7 1.0 2898 3432 6323 DOHH2_400M_050219_1,6332 DOHH2_400M_050219_1,6332,LLDQGQLNKY True True LLDQGQLNKY 34.817316 596.324389636517 9580365.0 6323.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 7.38494888941447 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6333 34.831 800.0 109090.0 25 0 26397.0 -1 LVRCLWRTFEI 11 71 746.910037327576 1491.805521721952 2 746.9098998904228 MULTI CID FTMS 0 0 0 6323 116501.796875 1.0 0 0.0 10 Carbamidomethyl (C) _LVRC(Carbamidomethyl (C))LWRTFEI_ chr18:74499387-74499937|12|11.42|0.2|5.86|+|1|None,CNDP2|1 1.4819007175156935 0.86815623132643 1 YSER[YQ]GY 8 -1 28.621 0.0 0.0 1.9185 0.0 0.0 427.3287893994894 0.0 427.3287893994894 0.0 16.83790129051628 0.0 0.0 0 0.5 0.0 0.0 0.0 YSER[YQ]GY 1.9185 - 46 + 1 2.101 65903.3 0.6299999952316284 2899 3432 6323 DOHH2_400M_050219_1,6333 DOHH2_400M_050219_1,6333,LVRCLWRTFEI False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 6334 34.84 482.0 208400.0 25 0 10533.0 -1 MNFLGWIF 8 139 522.2541131660631 1042.493673398926 2 522.2526733279228 MULTI CID FTMS 0 0 0 6323 112480.5 1.0 0 0.0 11 Oxidation (M) _M(Oxidation (M))NFLGWIF_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 11.114462752807354 0.7467182956244686 1 {[C(Carbamidomethyl (C))G]|[NC]}PDAR[PS]A{I|L} 10 -1 + 25.72 0.0 0.0 2.4672 2.4672 71.076 0.0 0.0 0.0 3.7136972889959807 0.2956446462509277 0.2956446462509277 3.5218251811136234 0 0.3494850021680094 0.0 0.0 0.0 {[C(Carbamidomethyl (C))G]|[NC]}PDAR[PS]A{I|L};{[C(Carbamidomethyl (C))G]|[NC]}PWR[PS]A{I|L};{[C(Carbamidomethyl (C))G]|[NC]}PDAR[TA][VP];{[C(Carbamidomethyl (C))G]|[NC]}PW[VG][PS]A{I|L};{[C(Carbamidomethyl (C))G]|[NC]}PDAR[{I|L}T][PG];{[C(Carbamidomethyl (C))G]|[NC]}PN{M(Oxidation (M))|F}[HK]A{I|L};{[C(Carbamidomethyl (C))G]|[NC]}PWR[TA][VP];[NP][{I|L}T]G[W{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))G]|[NC]}PWR[{I|L}T][PG];[NP][RP]G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QD]|[EN]|[WG]|[KD]|[RS]} 2.4672;2.1294;1.3351;1.2461;1.1468;1.1236;0.99722;0.85273;0.80893;0.75309 -;-;-;-;-;-;-;-;-;- 555 + 1 2.101 83380.8 1.0 2900 3432 6323 DOHH2_400M_050219_1,6334 DOHH2_400M_050219_1,6334,MNFLGWIF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6335 34.855 800.0 139460.0 25 0 9678.2 + 720 AEPLPRNGDQW 11 118 641.8122467411393 1281.6099405490786 2 641.8114501833916 MULTI CID FTMS 0 0 0 6323 114884.4296875 0.0482752565495847 4 -0.4995307922363281 12 Unmodified _AEPLPRNGDQW_ ENSG00000166483|ENST00000450114|WEE1;nc|ENSG00000166483|P30291-2|WEE1 18.373094154950223 0.6529654022026722 1 [YE][NS]EAQQNA 10 10 24.13 0.0 0.0 1.8828 0.0 0.0 0.0 144.11929369935856 144.11929369935856 -0.3207499751527365 0.0 -0.3207499751527365 0.0 0 0.0 0.0 0.0 0.3494850021680094 [YE][NS]EAQQNA 1.8828 - 653 1 2.101 89263.9 0.6499999761581421 2901 3432 6323 DOHH2_400M_050219_1,6335 DOHH2_400M_050219_1,6335,AEPLPRNGDQW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6336 34.858 137.0 341880.0 25 0 21874.0 + -1 SELEKIQKF 9 84 561.3120597984213 560.3047833318212 1 561.3126098513603 MULTI CID FTMS 0 0 0 6323 393512.5625 0.1437888795367186 -4 0.4452857971191406 13 ENSG00000172244|ENST00000306862|C5orf34 1 Y 1 -1 12.764 0.0 0.0 2.2781 0.0 0.0 379.23037950056965 0.0 379.23037950056965 0.0 1.5932974198384926 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.2781 - 35 + 1 2.101 43765.1 1.0 2902 3432 6323 DOHH2_400M_050219_1,6336 DOHH2_400M_050219_1,6336, False False SELEKIQKF 34.857772 561.31260985136 19663241.625 6323.0 ENSG00000172244|ENST00000306862|C5orf34 5.044195493062337 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6337 34.86 110.0 551320.0 25 0 42540.0 + -1 IMLHFFPCFIY 11 64 744.3651234061493 1486.7156938790986 2 744.3660766482353 MULTI CID FTMS 0 0 0 6323 263404.4375 1.0 0 0.0 14 Carbamidomethyl (C) _IMLHFFPC(Carbamidomethyl (C))FIY_ REV__ENST00000296812.6_1_5:41927115-41927202:+|nuORF 1.4819007175156935 0.86815623132643 1 ANQQAEEE{I|L}Q 10 -1 52.344 0.0 0.0 3.5208 0.0 0.0 328.20751828464046 0.0 328.20751828464046 0.0 26.574353635441312 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.8494850021680094 ANQQAEEE{I|L}Q 3.5208 - 578 + 1 2.101 50194.1 1.0 2903 3432 6323 DOHH2_400M_050219_1,6337 DOHH2_400M_050219_1,6337,IMLHFFPCFIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6338 34.874 800.0 151090.0 25 0 15085.0 11568 GKAGKGGG 8 148 631.3538249422036 630.3465484756035 1 631.3529540896416 MULTI CID FTMS 0 0 0 6323 267293.21875 0.0559962598556336 -5 0.5456733703613281 15 Unmodified _GKAGKGGG_ ENST00000469080.5_1_X:47104878-47106896:+|nuORF 0.6903765706972694 0.8201419426409876 1 Y 1 8 11.99 0.0 0.0 1.9021 0.0 0.0 449.2719920564613 0.0 449.2719920564613 0.0 1.6110964736695976 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.9021 - 33 + 1 2.101 95238.1 0.9700000286102296 2904 3432 6323 DOHH2_400M_050219_1,6338 DOHH2_400M_050219_1,6338,GKAGKGGG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6339 34.882 412.0 506990.0 25 0 45864.0 + -1 YSDYVYFM 8 154 552.2219926393974 1102.4294323455947 2 552.2223998904228 MULTI CID FTMS 0 0 0 6323 242913.0625 1.0 0 0.0 16 Oxidation (M) _YSDYVYFM(Oxidation (M))_ REV__ENSG00000172469|ENST00000358812|MANEA 34.18733598223924 0.3315367612694167 1 YSDY[EC]NP{I|L} 9 -1 + 58.527 0.0 0.0 5.3089 5.3089 81.605 0.0 0.0 0.0 37.52726745349533 1.1126506304690054 1.1126506304690054 6.020599913279625 0 0.2887254899964357 1.3979400086720375 0.75 0.6747425010840047 YSDY[EC]NP{I|L};YSYD[EC]NP{I|L};YSDK{[CA]|SS}{[QC]|[C(Carbamidomethyl (C))A]}W;YSDY[EC]V[QP];YSDY[EC]GGP{I|L};YSYD[EC]V[QP];YSY[Y{M(Oxidation (M))|F}]E[MT];YSYD[EC]GGP{I|L};YSY[{M(Oxidation (M))|F}T][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F};YSDY[EC]VA[PG] 5.3089;4.7628;4.2201;4.0137;3.8616;3.4675;3.4145;3.3155;2.8864;2.814 -;-;-;-;-;-;-;-;-;- 990 + 1 2.101 158733.3 1.0 2905 3432 6323 DOHH2_400M_050219_1,6339 DOHH2_400M_050219_1,6339,YSDYVYFM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6340 34.896 800.0 71853.0 25 0 8029.7 + 36856 TELQGMNEY 9 70 1084.4622715196756 1083.4549950530757 1 1084.461718738079 MULTI CID FTMS 0 0 0 6323 165868.03125 1.0 0 0.0 17 Unmodified _TELQGMNEY_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 63.22749603027936 0.0242951379232427 1 {[ET]|[MV]}{I|L}QGMNEY 9 0 + 73.355 0.0 0.0 6.7705 6.7705 90.294 0.0 0.0 0.0 13.52974763683696 49.73681132532333 13.52974763683696 9.208187539523747 0 1.305462187404089 0.0 0.6382104921644451 0.805462187404089 + + {[ET]|[MV]}{I|L}QGMNEY;{[ET]|[MV]}{I|L}QGMGGEY;{[ET]|[MV]}{I|L}[AG]GMNEY;{[ET]|[MV]}{I|L}QG[SG]TEY;{[ET]|[MV]}{I|L}Q[NS]TEY;{[ET]|[MV]}{I|L}[AG]GMGGEY;[Q{I|L}]{[ET]|[MV]}GMNEY;{[ET]|[MV]}{I|L}[C(Carbamidomethyl (C))R]NEY;{[ET]|[MV]}{I|L}[AG]G[SG]TEY;{[ET]|[MV]}{I|L}[AG][NS]TEY 6.7705;5.9206;5.9206;5.3933;4.5239;4.3313;4.227;4.0613;3.804;3.674 +;-;-;-;-;-;-;-;-;- + 503 1 2.101 44619.6 0.550000011920929 2906 3432 6323 DOHH2_400M_050219_1,6340 DOHH2_400M_050219_1,6340,TELQGMNEY True True TELQGMNEY 34.896351 1084.46171873808 719218.8125 6323.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 7.5954670906066895 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6341 34.91 800.0 128120.0 25 0 7022.3 + 7733 ELDPSNTKALY 11 129 625.8165840890898 0 625.8163329958916 PEAK CID FTMS 0 0 0 6323 155549.53125 1.0 0 0.0 18 Unmodified _ELDPSNTKALY_ ENSG00000171497|ENST00000307720|PPID 47.7319792270244 0.0696984214228108 1 ED{I|L}AKTY 7 7 56.803 0.0 0.0 4.5456 0.0 0.0 294.162879016267 132.0458162897094 426.2086953059765 0.0 0.0 0.0 0.0 0 0.5 0.0 1.079689690656103 0.6549471895720985 ED{I|L}AKTY 4.5456 - 893 + 1 2.101 83003.9 0.6499999761581421 2907 3432 6323 DOHH2_400M_050219_1,6341 DOHH2_400M_050219_1,6341,ELDPSNTKALY True True ELDPSNTKALY 34.910195 625.816332995892 466328.5625 6323.0 ENSG00000171497|ENST00000307720|PPID 7.413667837778727 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6342 34.925 800.0 143630.0 25 0 6080.8 + 6983 EEILHKIVKY 10 141 424.583309940568 1270.728100421904 3 424.5833312869072 MULTI CID FTMS 0 0 0 6323 133993.9375 1.0 0 0.0 19 Unmodified _EEILHKIVKY_ ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B 14.95716135407024 0.5965753712453801 1 EE{I|L}{I|L}HK[{I|L}V]KY 10 0 + 36.869 0.0 0.0 2.9014 2.9014 76.281 0.0 0.0 0.0 22.88969291792556 4.982697339452461 4.982697339452461 8.626096233342206 0 0.0 0.7695510786217261 0.0 0.0 + + EE{I|L}{I|L}HK[{I|L}V]KY;EE{I|L}{I|L}HK[{I|L}V]YK;EE{I|L}{I|L}HKP[RH]{I|L} 2.9014;2.2226;1.8153 +;-;- + 175 + 1 2.101 98099.8 0.5099999904632568 2908 3432 6323 DOHH2_400M_050219_1,6342 DOHH2_400M_050219_1,6342,EEILHKIVKY False True EEILHKIVKY 34.925184 424.583331286907 499440.625 6323.0 ENSG00000009954|ENST00000339594|BAZ1B;;nc|ENSG00000009954|Q9UIG0-2|BAZ1B 5.972404479980469 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6343 34.931 314.0 226760.0 25 0 27336.0 29794 QQCKSVPVS 9 104 488.2499275173168 0 488.2497131228447 PEAK CID FTMS 0 0 0 6323 112881.0859375 1.0 0 0.0 20 Unmodified _QQCKSVPVS_ chr2:142883035-142885349|10|11.4|0.23|5.65|+|1|TE_info:L1PA6,L1PA6_dup723,L1,LINE,donor,-,142882331,142883035|None,KYNU|8 11.640296217721598 0.2934555500198502 1 G 1 9 5.4846 0.0 0.0 0.56282 0.0 0.0 567.7428532262368 346.7003267877563 914.443180013993 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.56282 - 32 + 1 2.101 59945.8 1.0 2909 3432 6323 DOHH2_400M_050219_1,6343 DOHH2_400M_050219_1,6343,QQCKSVPVS False False False False TE_chimeric_transcript PXD020620_cell_line DOHH2_400M_050219_1 6345 34.936 2.8 18914000.0 25 0 4813800.0 + 45275 YSDKYGLGY 9 74 533.2478662087896 1064.481179484379 2 533.2487670779228 MULTI CID FTMS 0 0 0 6344 19398518.0 0.8558908541075531 1 -0.1135406494140625 1 Unmodified _YSDKYGLGY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 63.960520009940105 0.0238892913700936 1 YSDKYG{I|L}GY 9 0 + 96.782 0.0 0.0 9.092 9.092 97.365 0.0 0.0 0.0 49.4136756363956 14.973024840566469 14.973024840566469 20.687587626244124 0 2.024227503252014 1.6989700043360187 0.4247425010840047 0.0 + + YSDKYG{I|L}GY;YSDKY{[QV]|[N{I|L}]|[RA]|[KV]}Y;YS[HT][PA]G{I|L}GY;YS[HT][QP]{I|L}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}SYG{I|L}YGY;YSDK[HT]{I|L}{[DS]|[MA]|[CV]|TT};{[QD]|[EN]|[WG]|[KD]|[RS]}SYG{I|L}GYY;[YG]{I|L}G[VS]SYGY;[YG]{I|L}G[VS]SGYY;{[QD]|[EN]|[WG]|[KD]|[RS]}SYGY{I|L}GY 9.092;7.1485;6.2785;5.9477;5.6138;5.5966;5.407;5.3619;5.1551;4.8865 +;-;-;-;-;-;-;-;-;- + 652 + 1 2.098 45760.2 1.0 2910 3433 6344 DOHH2_400M_050219_1,6345 DOHH2_400M_050219_1,6345,YSDKYGLGY True True YSDKYGLGY 34.935598 533.248767077923 533980944.0 6344.0 ENST00000564794.1_1_16:23700038-23701081:+|nuORF;;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;;ENSG00000166851|ENST00000300093|PLK1 11.208947817484535 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6346 34.938 89.0 366130.0 25 0 28972.0 + 32898 SEINKPNFY 9 66 556.2745072131323 1110.5344614930646 2 556.2747680544853 MULTI CID FTMS 0 0 0 6344 325665.28125 0.1089956906635589 2 -0.2410087585449218 2 Unmodified _SEINKPNFY_ ENSG00000067334|ENST00000436063|DNTTIP2 34.10243960390752 0.1078313939113124 1 {[ES]|[DT]|[{I|L}C]}{I|L}NK[NP]{M(Oxidation (M))|F}Y 9 0 + 36.889 0.0 0.0 3.3218 3.3218 79.612 0.0 0.0 0.0 22.28524061761697 11.17599686953519 11.17599686953519 9.208187539523756 0 0.5 0.0 0.0 0.3807196863200844 + + {[ES]|[DT]|[{I|L}C]}{I|L}NK[NP]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}GGK[NP]{M(Oxidation (M))|F}Y 3.3218;2.4926 +;- + 51 + 1 2.098 32814.6 1.0 2911 3433 6344 DOHH2_400M_050219_1,6346 DOHH2_400M_050219_1,6346,SEINKPNFY True True SEINKPNFY 34.937584 556.274768054485 36219892.0 6344.0 ENSG00000067334|ENST00000436063|DNTTIP2 8.586931705474854 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6347 34.939 24.0 1872200.0 25 0 156620.0 43499 WWWWIWWQWW 10 56 874.9042007258124 1747.7938485184247 2 874.9065429568291 MULTI CID FTMS 0 0 0 6344 2210231.25 0.813515326994344 -1 0.1666793823242187 3 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 1 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 8 65.367 0.0 0.0 3.74 0.0 0.0 734.3663807599625 0.0 734.3663807599625 0.0 48.13486257521106 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.8494850021680094 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.74 - 161 1 2.098 39862.2 1.0 2912 3433 6344 DOHH2_400M_050219_1,6347 DOHH2_400M_050219_1,6347,WWWWIWWQWW False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 6348 34.94 31.0 1966000.0 25 0 202400.0 -1 CKQCLNEVCFY 11 77 732.3127214976103 1462.6108900620204 2 732.3134033083916 MULTI CID FTMS 0 0 0 6344 1686597.0 0.7313818940379 1 -0.1135406494140625 4 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))KQC(Carbamidomethyl (C))LNEVCFY_ ENSG00000117122|ENST00000375535|MFAP2;ENST00000490075.5_1_1:17301417-17303350:-|nuORF;nc|ENSG00000117122|P55001-2|MFAP2;nc|ENSG00000117122|P55001-3|MFAP2 10.799506525563784 0.8105043987015127 1 {[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 83.461 0.0 0.0 5.7063 5.7063 76.865 0.0 0.0 0.0 0.6694678963061165 11.448658907276354 0.6694678963061165 0.6694678963061165 0 0.8935078169319297 1.0 0.4247425010840047 1.555462187404089 {[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQQGGA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]N[HN]EA[AG]QNA{M(Oxidation (M))|F}Y 5.7063;5.6606;5.362;5.1005;5.086;5.086;5.086;5.0403;5.0403;5.0403 -;-;-;-;-;-;-;-;-;- 762 1 2.098 50445.2 1.0 2913 3433 6344 DOHH2_400M_050219_1,6348 DOHH2_400M_050219_1,6348,CKQCLNEVCFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6349 34.941 38.0 1921800.0 25 0 292840.0 + 43970 YIDDRGFRY 9 67 402.19645084236026 1203.5675231272808 3 402.1964599490166 MULTI CID FTMS 0 0 0 6344 1152987.125 0.4840892203609864 1 -0.1135406494140625 5 Unmodified _YIDDRGFRY_ ENSG00000149418|ENST00000278742|ST14 16.565877749689598 0.3882643987948875 1 Y{I|L}DDR 5 4 62.563 0.0 0.0 5.1981 0.0 0.0 0.0 538.2415865533811 538.2415865533811 51.59379381312206 0.0 0.0 0.0 0 0.0 2.0 0.0 0.7614393726401688 + Y{I|L}DDR 5.1981 + + 39 + 1 2.098 63305.1 1.0 2914 3433 6344 DOHH2_400M_050219_1,6349 DOHH2_400M_050219_1,6349,YIDDRGFRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6350 34.942 48.0 1321200.0 25 0 129720.0 -1 MDNITRQNQFY 11 69 744.3313538770935 0 744.3320800662041 PEAK CID FTMS 0 0 0 6344 881807.0625 0.7097336477797912 -1 0.1666793823242187 6 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.4618489994582195 1 ANQQAE 6 -1 55.706 0.0 0.0 3.7471 0.0 0.0 328.14177635598213 514.2052096002561 842.3469859562383 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 1.2302046884880935 ANQQAE 3.7471 - 384 + 1 2.098 50730.4 1.0 2915 3433 6344 DOHH2_400M_050219_1,6350 DOHH2_400M_050219_1,6350,MDNITRQNQFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6351 34.944 68.0 871630.0 25 0 103620.0 + 6986 EEIPKNYSI 9 79 546.782331831828 1091.5501107304558 2 546.7823364138603 MULTI CID FTMS 0 0 0 6344 592783.125 0.5917577936678841 -1 0.1666793823242187 7 Unmodified _EEIPKNYSI_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 29.081581746732265 0.1611639662936252 1 EE{I|L}P 4 5 31.911 0.0 0.0 2.9235 0.0 0.0 0.0 620.3058565729124 620.3058565729124 0.5237875363565792 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + EE{I|L}P 2.9235 + + 155 + 1 2.098 49137.1 1.0 2916 3433 6344 DOHH2_400M_050219_1,6351 DOHH2_400M_050219_1,6351,EEIPKNYSI False True EEIPKNYSI 34.944075 546.78233641386 6308698.5 6344.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 5.783071676890056 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6352 34.948 179.0 307400.0 25 0 29756.0 10068 FPRQQLDL 8 77 508.7802562798004 1015.5459596264008 2 508.7800781130791 MULTI CID FTMS 0 0 0 6344 263567.03125 0.3301793539118886 9 -1.0202064514160156 8 Unmodified _FPRQQLDL_ ENSG00000242419|ENST00000306593|PCDHGC4;nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4 18.13498045792455 0.6430038125133779 1 RAGTPE 6 7 44.469 0.0 0.0 4.3788 0.0 0.0 386.2166310041032 0.0 386.2166310041032 0.0 30.48963451112506 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.0 RAGTPE 4.3788 - 52 1 2.098 54432.5 1.0 2917 3433 6344 DOHH2_400M_050219_1,6352 DOHH2_400M_050219_1,6352,FPRQQLDL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6353 34.951 162.0 411730.0 25 0 52630.0 + 40808 VLLSKENSL 9 87 501.7968924048287 1001.5792318764576 2 501.7968017458916 MULTI CID FTMS 0 0 0 6344 270403.28125 1.0 0 0.0 9 Unmodified _VLLSKENSL_ ENSG00000108021|ENST00000695737|TASOR2 62.57269311338072 0.0246576765497938 1 V{I|L}{I|L}P[{I|L}T]{M(Oxidation (M))|F}S{I|L} 9 4 + 72.036 0.0 0.0 7.1922 7.1922 96.706 0.0 0.0 0.0 49.8514532483668 2.087287502497901 2.087287502497901 72.03578771929884 0 0.8494850021680094 2.0 0.75 0.0 V{I|L}{I|L}P[{I|L}T]{M(Oxidation (M))|F}S{I|L} 7.1922 - 361 + 1 2.098 55641.3 1.0 2918 3433 6344 DOHH2_400M_050219_1,6353 DOHH2_400M_050219_1,6353,VLLSKENSL True True VLLSKENSL 34.950721 501.796801745892 604922.9375 6344.0 ENSG00000108021|ENST00000695737|TASOR2 5.9048835436503095 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6354 34.955 227.0 413360.0 25 0 39471.0 6969 EEIFWTYN 8 105 551.2459735871447 1100.477394241089 2 551.2460815310478 MULTI CID FTMS 0 0 0 6344 239752.0625 1.0 0 0.0 10 Unmodified _EEIFWTYN_ ENSG00000204740|ENST00000454679|MALRD1 36.04419817259434 0.3004715606373109 1 EE{I|L}{I|L}G 5 5 42.496 0.0 0.0 3.8616 0.0 0.0 0.0 556.1840304010374 556.1840304010374 16.879214713254523 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 EE{I|L}{I|L}G 3.8616 - 303 + 1 2.098 73333.6 1.0 2919 3433 6344 DOHH2_400M_050219_1,6354 DOHH2_400M_050219_1,6354,EEIFWTYN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6355 34.958 178.0 291160.0 25 0 16118.0 + -1 AEALAAAQQHF 11 99 578.7626791231091 1155.5108053130182 2 578.7633544802666 MULTI CID FTMS 0 0 0 6344 189167.71875 0.3509384614278648 1 -0.1135406494140625 11 Oxidation (M) _NTDPSIVM(Oxidation (M))TY_ ENSG00000136824|ENST00000374793|SMC2;nc|ENSG00000136824|O95347-2|SMC2 27.628801355627647 0.3479284626772844 1 {[QS]|[NT]}D[W{I|L}]AA{I|L}A 9 -1 38.235 0.0 0.0 3.309 0.0 0.0 0.0 196.99381247538068 196.99381247538068 1.6718164598911116 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.2059771852360797 0.2742275032520141 {[QS]|[NT]}D[W{I|L}]AA{I|L}A 3.309 - 1315 1 2.098 41971.1 1.0 2920 3433 6344 DOHH2_400M_050219_1,6355 DOHH2_400M_050219_1,6355,NTDPSIVMTY False False AEALAAAQQHF 34.958482 578.763354480267 758076.1875 6344.0 ENSG00000136824|ENST00000374793|SMC2;;nc|ENSG00000136824|O95347-2|SMC2 7.063133716583252 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6356 34.964 314.0 242350.0 25 0 24368.0 27490 PKGVGSPL 8 132 377.7256505671082 753.4367482010164 2 377.7251769900322 MULTI CID FTMS 0 0 0 6344 189454.875 0.6381244944390266 4 -0.4186935424804687 12 Unmodified _PKGVGSPL_ ENST00000568223.6_1_16:767979-768486:+|nuORF 2.302733041254933 0.8103549651115762 1 {M(Oxidation (M))|F} 1 8 9.3323 0.0 0.0 1.2386 0.0 0.0 588.3570343111711 0.0 588.3570343111711 0.0 6.568095614860008 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2386 - 7 + 1 2.098 60822.2 1.0 2921 3433 6344 DOHH2_400M_050219_1,6356 DOHH2_400M_050219_1,6356,PKGVGSPL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6357 34.968 191.0 268120.0 25 0 23673.0 + + 14371 VPFSKRYL 8 86 505.797574937033 1009.580596940866 2 505.2951843142509 MULTI CID FTMS 0 0 0 6344 178906.390625 1.0 0 0.0 13 Unmodified _IEYVKFVL_ ENSG00000116251|ENST00000234875|RPL22;ENST00000484916.1_1_14:19468684-19468777:+|nuORF 7.910154910731844 0.7763180056447161 1 P{M(Oxidation (M))|F}S 3 -1 18.5 0.0 0.0 1.8324 0.0 0.0 100.07254197067432 575.3340548150999 675.4065967857742 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 P{M(Oxidation (M))|F}S 1.8324 - 60 + 1 2.098 43339.2 1.0 2922 3433 6344 DOHH2_400M_050219_1,6357 DOHH2_400M_050219_1,6357,IEYVKFVL False False VPFSKRYL 34.967861 505.295184314251 1938063.375 6344.0 ENSG00000116251|ENST00000234875|RPL22;;ENST00000484916.1_1_14:19468684-19468777:+|nuORF 1.3918699423472087 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6358 34.972 211.0 290850.0 25 0 18981.0 + -1 MILTWMMVL 9 105 385.2002533999292 1152.5789307999876 3 385.2000610232353 MULTI CID FTMS 0 0 0 6344 176051.03125 1.0 0 0.0 14 Oxidation (M) _MILTWM(Oxidation (M))MVL_ REV__ENST00000352689.10_1_7:131130584-131130623:+|nuORF 12.240655878213236 0.5053430591993562 1 M{I|L}{M(Oxidation (M))|F} 3 -1 43.188 0.0 0.0 3.747 0.0 0.0 0.0 758.3836763971311 758.3836763971311 28.723637474483468 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 M{I|L}{M(Oxidation (M))|F} 3.747 - 54 + 1 2.098 51853.2 1.0 2923 3433 6344 DOHH2_400M_050219_1,6358 DOHH2_400M_050219_1,6358,MILTWMMVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6359 34.986 800.0 352020.0 25 0 23057.0 + 6926 EEFSRAAEKLY 11 140 671.835970704535 1341.65738847587 2 671.8354369997978 MULTI CID FTMS 0 0 0 6344 159955.015625 0.314567418218969 -1 0.1666793823242187 15 Unmodified _EEFSRAAEKLY_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 101.5434397834973 0.0014376440060606 1 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[C(Carbamidomethyl (C))N]AAEK{I|L}Y 11 5 + 81.687 0.0 0.0 6.0885 6.0885 85.274 0.0 0.0 0.0 0.8084853550672193 46.15334409796984 0.8084853550672193 6.73393743112328 0 1.8494850021680087 0.0 2.473197507588033 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[C(Carbamidomethyl (C))N]AAEK{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]}AEK{I|L}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[C(Carbamidomethyl (C))N]AAKE{I|L}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[C(Carbamidomethyl (C))N]AATR{I|L}Y;[K{I|L}]{[{M(Oxidation (M))|F}D]|MM}{[ES]|[DT]|[{I|L}C]}AEK{I|L}Y;EE[YT][H{I|L}]{M(Oxidation (M))|F}K{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]}AQE{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]}AKE{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]}ATR{I|L}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[C(Carbamidomethyl (C))N]AAT[VG]{I|L}Y 6.0885;5.5866;5.1919;5.162;4.9339;4.8321;4.69;4.69;4.6601;4.4817 -;-;-;-;-;-;-;-;-;- 2428 1 2.098 205822.6 0.7300000190734863 2924 3433 6344 DOHH2_400M_050219_1,6359 DOHH2_400M_050219_1,6359,EEFSRAAEKLY True True EEFSRAAEKLY 34.985696 671.835436999798 3768154.8125 6344.0 ENSG00000143742|ENST00000304786|SRP9;;nc|ENSG00000143742|P49458-2|SRP9 8.157669385274252 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6360 34.996 606.0 225100.0 25 0 34487.0 + 20058 LIRRGSTI 8 153 458.2919620579897 914.5693711827794 2 458.2906371951103 MULTI CID FTMS 0 0 0 6344 148024.109375 1.0 0 0.0 16 Unmodified _LIRRGSTI_ REV__ENSG00000113790|ENST00000231887|EHHADH;REV__nc|ENSG00000113790|Q08426-2|EHHADH 16.942295170755138 0.6606234159769251 1 {I|L}Q 2 -1 38.21 0.0 0.0 4.1779 0.0 0.0 0.0 670.3902071588499 670.3902071588499 24.556230360092584 0.0 0.0 0.0 0 0.0519020776254365 1.3979400086720375 0.0 0.4247425010840047 {I|L}Q 4.1779 - 95 + 1 2.098 105726.2 1.0 2925 3433 6344 DOHH2_400M_050219_1,6360 DOHH2_400M_050219_1,6360,LIRRGSTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6361 35.003 388.0 182590.0 25 0 13910.0 + 44915 YPPPHQVF 8 102 492.7504948151479 983.4864366970958 2 492.7505370974541 MULTI CID FTMS 0 0 0 6344 118672.6328125 0.2335046540454645 5 -0.5587501525878906 17 Unmodified _YPPPHQVF_ ENSG00000076248|ENST00000242576|UNG;ENST00000540158.1_1_12:109535484-109537104:+|nuORF;nc|ENSG00000076248|P13051-2|UNG 24.67388899826682 0.525179942228231 1 YP[KC]P[{I|L}T]Y 8 6 + 50.865 0.0 0.0 5.1719 5.1719 80.633 0.0 0.0 0.0 36.88547520912806 3.9144127238045456 3.9144127238045456 5.440680443502757 0 0.4247425010840047 2.0 0.3252574989159953 0.0 YP[KC]P[{I|L}T]Y;YP[KC]P[YT]{I|L};YP[{I|L}A]C(Carbamidomethyl (C))VVY;YPP[KC][{I|L}T]Y;YP[{I|L}A]C(Carbamidomethyl (C))[{I|L}T]{M(Oxidation (M))|F};YPPPP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GP;YPPP{[QN]|[E{I|L}]|[KN]}TAP;YPP[KC][YT]{I|L};YP[YK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GP;YPP[{I|L}T][EP]AP 5.1719;4.6187;4.177;4.1305;4.0785;3.7384;3.7384;3.5773;2.9812;2.8486 -;-;-;-;-;-;-;-;-;- 367 + 1 2.098 58445.5 1.0 2926 3433 6344 DOHH2_400M_050219_1,6361 DOHH2_400M_050219_1,6361,YPPPHQVF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6362 35.017 705.0 154210.0 25 0 8323.1 + 5404 DIKRVYSL 8 161 497.2907263765164 992.5668998198328 2 497.2917053103447 MULTI CID FTMS 0 0 0 6344 116321.421875 1.0 0 0.0 18 Unmodified _DLKVRYVT_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 17.11289562659939 0.6581031263288403 1 D{I|L}K 3 5 43.672 0.0 0.0 4.3999 0.0 0.0 0.0 633.3387545221311 633.3387545221311 22.501225267834 0.0 0.0 0.0 0 0.1989700043360188 2.0 0.0 0.0 + D{I|L}K 4.3999 + + 243 + 1 2.098 85016.8 1.0 2927 3433 6344 DOHH2_400M_050219_1,6362 DOHH2_400M_050219_1,6362,DLKVRYVT False False DIKRVYSL 35.016661 497.291705310345 467791.46875 6344.0 ENSG00000183207|ENST00000595090|RUVBL2;;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;;nc|ENSG00000183207|Q9Y230-2|RUVBL2 2.821169217427572 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6363 35.03 800.0 143560.0 25 0 13795.0 + + 26569 VNLGGSKSISIS 12 152 581.3275857977728 1160.6406186623456 2 581.3276244997978 MULTI CID FTMS 0 0 0 6344 107191.7421875 1.0 0 0.0 19 Unmodified _NVLISTPFAIS_ P04264;ENSG00000167768|ENST00000252244|KRT1 43.77239144664712 0.1542841003880809 1 {[NV]|[RG]}[KT]SS{I|L}{[NV]|[RG]}S{I|L} 11 -1 + 44.001 0.0 0.0 3.7911 3.7911 72.817 0.0 0.0 0.0 8.846434334517134 4.642657377701589 4.642657377701589 2.614393726401687 0 0.7742275032520141 0.0 1.4476212463643423 0.7302046884880937 {[NV]|[RG]}[KT]SS{I|L}{[NV]|[RG]}S{I|L};{[NV]|[RG]}[KT]S{I|L}S{[NV]|[RG]}S{I|L};{[NV]|[RG]}[KT]SS{I|L}{I|L}{[WN]|[YH]};{[NV]|[RG]}[KT]S{I|L}S{I|L}{[WN]|[YH]};{[QV]|[N{I|L}]|[RA]|[KV]}[KS]SS{I|L}{[NV]|[RG]}S{I|L};{[NV]|[RG]}{I|L}GQS{I|L}[KC]S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[KS]S{I|L}S{[NV]|[RG]}S{I|L};{[NV]|[RG]}[KT]S{I|L}{[NV]|[RG]}SS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[KS]SS{I|L}{I|L}{[WN]|[YH]};{[QV]|[N{I|L}]|[RA]|[KV]}[KS]S{I|L}S{I|L}{[WN]|[YH]} 3.7911;3.5659;3.3911;3.1658;3.0289;2.8624;2.8037;2.6394;2.6289;2.4036 -;-;-;-;-;-;-;-;-;- 1204 1 2.098 91642.2 0.5400000214576721 2928 3433 6344 DOHH2_400M_050219_1,6363 DOHH2_400M_050219_1,6363,NVLISTPFAIS False False VNLGGSKSISIS 35.030494 581.327624499798 529810.625 6344.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 5.6961361567179365 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6364 35.044 800.0 120610.0 25 0 9735.4 + 9025 FDNHNSQVW 9 146 573.7516772661759 1145.4888015991517 2 573.7516357302666 MULTI CID FTMS 0 0 0 6344 95427.9296875 1.0 0 0.0 20 Unmodified _FDNHNSQVW_ ENSG00000085415|ENST00000399892|SEH1L;ENST00000590032.1_1_18:12982523-12982694:+|nuORF;nc|ENSG00000085415|Q96EE3|SEH1L 39.94969957227396 0.0757326808254658 1 NSQVW 5 4 54.469 0.0 0.0 4.7551 0.0 0.0 513.2016468732437 0.0 513.2016468732437 0.0 41.37009080640347 0.0 0.0 0 0.8494850021680094 0.0 0.7742275032520141 0.805462187404089 + NSQVW 4.7551 + + 351 1 2.098 79048.9 0.5099999904632568 2929 3433 6344 DOHH2_400M_050219_1,6364 DOHH2_400M_050219_1,6364,FDNHNSQVW True True FDNHNSQVW 35.044323 573.751635730267 533812.5625 6344.0 ENSG00000085415|ENST00000399892|SEH1L;;nc|ENSG00000085415|Q96EE3|SEH1L;;ENST00000590032.1_1_18:12982523-12982694:+|nuORF 5.955078919728597 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6366 35.056 522.0 176040.0 25 0 24737.0 + 43972 YIDDRGFRY 9 89 602.7908969382266 1203.5672409432532 2 602.7910644412041 MULTI CID FTMS 0 0 0 6365 69508.515625 0.0836081966891451 2 -0.2193107604980468 1 Unmodified _YIDDRGFRY_ ENSG00000149418|ENST00000278742|ST14 27.22323531849824 0.1848086127304535 1 Y{I|L}DDR 5 4 50.956 0.0 0.0 4.2337 0.0 0.0 0.0 538.2408541315061 538.2408541315061 31.35151878060192 0.0 0.0 0.0 0 0.218765315847925 2.0 0.4247425010840047 0.3807196863200844 + Y{I|L}DDR 4.2337 + + 92 + 1 2.098 68225.5 1.0 2930 3434 6365 DOHH2_400M_050219_1,6366 DOHH2_400M_050219_1,6366,YIDDRGFRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6367 35.057 29.0 1887500.0 25 0 222230.0 + 23360 LTDITKGVQY 10 89 569.3110550146549 1136.6075570961098 2 569.3115722537041 MULTI CID FTMS 0 0 0 6365 1853821.75 0.9015593089690735 -1 0.1135406494140625 2 Unmodified _LTDITKGVQY_ ENSG00000167658|ENST00000309311|EEF2 75.5705956163825 0.0187571863157879 1 {I|L}TD{I|L}TPT 7 5 75.808 0.0 0.0 6.6697 0.0 0.0 0.0 392.19431482486567 392.19431482486567 40.2346448708586 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.3252574989159953 0.0 {I|L}TD{I|L}TPT 6.6697 - 1213 + 1 2.098 47529.6 1.0 2931 3434 6365 DOHH2_400M_050219_1,6367 DOHH2_400M_050219_1,6367,LTDITKGVQY True True LTDITKGVQY 35.057279 569.311572253704 13446527.0 6365.0 ENSG00000167658|ENST00000309311|EEF2 8.379609107971191 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6368 35.059 71.0 546610.0 25 0 49393.0 + 39725 VEKGNLTVY 9 74 511.7808787004623 0 511.7807494997978 PEAK CID FTMS 0 0 0 6365 482623.90625 0.7277291246959424 1 -0.1274681091308593 3 Unmodified _VEKGNLTVY_ REV__ENSG00000137760|ENST00000428149|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-2|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-3|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-4|ALKBH8 10.823927491677226 0.3028200641087142 1 Q{I|L} 2 -1 15.969 0.0 0.0 1.5632 0.0 0.0 280.1485086206873 497.2374629364117 777.3859715570991 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 Q{I|L} 1.5632 - 27 + 1 2.098 36655.8 1.0 2932 3434 6365 DOHH2_400M_050219_1,6368 DOHH2_400M_050219_1,6368,VEKGNLTVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6369 35.062 125.0 472450.0 25 0 45880.0 + 68 AAFEKQVL 8 86 453.2580430610189 904.5015331888376 2 453.2579833865166 MULTI CID FTMS 0 0 0 6365 353814.9375 1.0 0 0.0 4 Unmodified _AAFEKQVL_ ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1 36.04419817259434 0.3004715606373109 1 AA{M(Oxidation (M))|F}EKQV{I|L} 8 0 + 39.465 0.0 0.0 4.3632 4.3632 83.071 0.0 0.0 0.0 20.73170544442344 11.810070757400894 11.810070757400894 9.262137858390815 0 0.9322333069283656 2.0 0.0 0.0 + + AA{M(Oxidation (M))|F}EKQV{I|L};AA{M(Oxidation (M))|F}EK[AG]V{I|L};AA[YV]QAAV{I|L};AA{M(Oxidation (M))|F}[WR][RV];AA[YV]AAQV{I|L};[{M(Oxidation (M))|F}E]KQAAV{I|L};[{M(Oxidation (M))|F}E]AAKQV{I|L};[{M(Oxidation (M))|F}E]KAAQV{I|L};[{M(Oxidation (M))|F}E]K[AG]AAV{I|L};[{M(Oxidation (M))|F}T][VG]QAAV{I|L} 4.3632;3.3392;2.7357;2.4336;1.905;1.8813;1.4102;1.0506;0.85731;0.66263 +;-;-;-;-;-;-;-;-;- + 175 1 2.098 51260.4 1.0 2933 3434 6365 DOHH2_400M_050219_1,6369 DOHH2_400M_050219_1,6369,AAFEKQVL False True AAFEKQVL 35.061525 453.257983386517 2051823.625 6365.0 ENSG00000125844|ENST00000377813|RRBP1;;nc|ENSG00000125844|Q9P2E9-3|RRBP1 2.9365824858347573 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6370 35.065 189.0 432740.0 25 0 42595.0 + 6927 EEFSRAAEKLY 11 98 448.2265238839098 1341.6577422519294 3 448.2266113162041 MULTI CID FTMS 0 0 0 6365 276660.875 1.0 0 0.0 5 Unmodified _EEFSRAAEKLY_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 17.44264345198275 0.6723198055858692 1 EE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}K 6 7 42.184 0.0 0.0 3.1442 0.0 0.0 0.0 511.2281137549908 511.2281137549908 25.964622861035856 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.3054621874040891 EE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}K 3.1442 - 334 + 1 2.098 71427.6 1.0 2934 3434 6365 DOHH2_400M_050219_1,6370 DOHH2_400M_050219_1,6370,EEFSRAAEKLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6371 35.07 245.0 275420.0 25 0 20029.0 -1 0 67 881.9132660489507 1761.8119791647014 2 881.9133788943291 MULTI CID FTMS 0 0 0 6365 247217.921875 0.2192973894347702 -3 0.4006996154785156 6 1 {I|L}N[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 14 -1 71.368 0.0 0.0 4.0508 0.0 0.0 211.0957051007828 0.0 211.0957051007828 0.0 46.70178264569621 0.0 0.0 0 1.0 0.0 0.0 0.8494850021680094 {I|L}N[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.0508 - 768 1 2.098 52106.2 1.0 2935 3434 6365 DOHH2_400M_050219_1,6371 DOHH2_400M_050219_1,6371, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6372 35.073 144.0 666820.0 25 0 65421.0 + 31646 RRGDFIHVM 9 111 377.5343452165487 1129.581206249846 3 377.5342895388603 MULTI CID FTMS 0 0 0 6365 239492.59375 0.1435771087247298 -1 0.1135406494140625 7 Unmodified _RRGDFIHVM_ ENSG00000177885|ENST00000316804|GRB2;ENST00000462266.1_1_17:73316451-73322393:-|nuORF;nc|ENSG00000177885|P62993-2|GRB2 17.44264345198275 0.3645313841742926 1 [{M(Oxidation (M))|F}T]H{I|L} 4 7 20.445 0.0 0.0 1.81 0.0 0.0 0.0 628.2968370595355 628.2968370595355 5.841218823962109 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [{M(Oxidation (M))|F}T]H{I|L} 1.81 - 47 + 1 2.098 83142.6 1.0 2936 3434 6365 DOHH2_400M_050219_1,6372 DOHH2_400M_050219_1,6372,RRGDFIHVM False True RRGDFIHVM 35.07266 377.53428953886 24691988.5 6365.0 ENST00000462266.1_1_17:73316451-73322393:-|nuORF;;ENSG00000177885|ENST00000316804|GRB2;;nc|ENSG00000177885|P62993-2|GRB2 7.695534388224284 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6373 35.078 313.0 242270.0 25 0 21272.0 + 5240 LTDPSSPTISSY 12 122 634.3064267182897 1266.5983005033793 2 634.3063842654228 MULTI CID FTMS 0 0 0 6365 219716.921875 0.4452822927029335 -1 0.1135406494140625 8 Unmodified _DKDEIPTISSY_ ENSG00000165480|ENST00000314759|SKA3;ENST00000298260.8_1_13:21729833-21750660:-|nuORF;nc|ENSG00000165480|Q8IX90-3|SKA3 55.23464941255904 0.0886405999673349 1 [{I|L}T]PSDSPT{I|L}SSY 12 6 + 87.402 0.0 0.0 6.9006 6.9006 81.095 0.0 0.0 0.0 13.631549214411493 14.90417829939986 13.631549214411493 1.1932554326627098 0 1.492992819099939 1.2218487496163564 2.3243923658886185 0.0 [{I|L}T]PSDSPT{I|L}SSY;[{I|L}T]PSSDPT{I|L}SSY;[{I|L}T]DRDPT{I|L}SSY;[{I|L}T]DPSSPT{I|L}SSY;[{I|L}T]PDSSPT{I|L}SSY;[{I|L}T]PSDSP{I|L}TSSY;[{I|L}T]PSSDP{I|L}TSSY;[TP]{I|L}SDSPT{I|L}SSY;[TP]{I|L}SSDPT{I|L}SSY;[{I|L}T]DRDP{I|L}TSSY 6.9006;6.8064;6.5175;6.25;6.1704;5.972;5.8778;5.8243;5.7301;5.589 -;-;-;-;-;-;-;-;-;- 3544 1 2.098 63860.9 1.0 2937 3434 6365 DOHH2_400M_050219_1,6373 DOHH2_400M_050219_1,6373,DKDEIPTISSY True True LTDPSSPTISSY 35.078385 634.306384265423 6036368.0 6365.0 ENSG00000165480|ENST00000314759|SKA3;;ENST00000298260.8_1_13:21729833-21750660:-|nuORF;;nc|ENSG00000165480|Q8IX90-3|SKA3 7.3179677327473955 2.0 False 12.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6374 35.082 190.0 299470.0 25 0 22198.0 + 12299 GSDPRSWEY 9 90 548.7383425386693 1095.4621321441384 2 548.7387573122978 MULTI CID FTMS 0 0 0 6365 213964.234375 1.0 0 0.0 9 Unmodified _GSDPRSWEY_ ENSG00000087074|ENST00000200453|PPP1R15A;nc|ENSG00000087074|O75807-2|PPP1R15A 13.042465956692816 0.4836390050082244 1 {M(Oxidation (M))|F}EY 3 7 28.812 0.0 0.0 2.6301 0.0 0.0 638.2671986310562 0.0 638.2671986310562 0.0 13.750612633917 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}EY 2.6301 - 101 1 2.098 49501.8 1.0 2938 3434 6365 DOHH2_400M_050219_1,6374 DOHH2_400M_050219_1,6374,GSDPRSWEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6375 35.086 222.0 521270.0 25 0 64628.0 + 45323 YSKPRLATF 9 137 361.5382463023664 1081.5929095072993 3 361.5383483767509 MULTI CID FTMS 0 0 0 6365 218718.65625 0.7349333094200766 -1 0.1135406494140625 10 Unmodified _YSKPRLATF_ ENSG00000167283|ENST00000300688|ATP5MG;ENST00000527186.1_1_11:118277587-118279810:+|nuORF;ENST00000533172.5_1_11:118272380-118279724:+|nuORF;ENST00000534385.1_1_11:118272380-118277824:+|nuORF 13.90604991867851 0.4602628045680013 1 TKSY{M(Oxidation (M))|F} 5 7 26.471 0.0 0.0 2.4474 0.0 0.0 437.2740040509781 0.0 437.2740040509781 0.0 10.568109453757655 0.0 0.0 0 0.2742275032520141 0.0 1.2302046884880935 0.0 TKSY{M(Oxidation (M))|F} 2.4474 - 96 1 2.098 95392.5 1.0 2939 3434 6365 DOHH2_400M_050219_1,6375 DOHH2_400M_050219_1,6375,YSKPRLATF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6376 35.091 254.0 237840.0 25 0 31651.0 + 10925 GAKRHSGL 8 105 413.2388644783535 824.463176023507 2 413.2386047244072 MULTI CID FTMS 0 0 0 6365 150610.5625 0.1133210307879021 -23 2.0177078247070312 11 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 5.230669730166228 0.792582437072536 1 T 1 -1 8.1648 0.0 0.0 0.99032 0.0 0.0 412.2591487791695 308.1375826471313 720.3967314263008 0.0 0.0 0.0 0.0 0 0.5 0.0 0.2887254899964357 0.0 T 0.99032 - 3 + 1 2.098 50676.3 1.0 2940 3434 6365 DOHH2_400M_050219_1,6376 DOHH2_400M_050219_1,6376,GAKRHSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6377 35.098 403.0 250850.0 25 0 19652.0 + 38107 TPLKKVIL 8 127 456.3181869094376 910.6218208856752 2 456.3178588747978 MULTI CID FTMS 0 0 0 6365 142216.4375 1.0 0 0.0 12 Unmodified _TPLKKVIL_ ENSG00000164934|ENST00000612750|DCAF13;ENST00000495256.1_1_7:105766226-105766550:+|nuORF 37.97399986684836 0.2681860861828418 1 TP{I|L} 3 5 40.45 0.0 0.0 4.4421 0.0 0.0 0.0 596.4146712250149 596.4146712250149 11.918402966525576 0.0 0.0 0.0 0 0.6549471895720984 1.5228787452803376 0.0 0.0 + TP{I|L} 4.4421 + + 75 + 1 2.098 81523.4 1.0 2941 3434 6365 DOHH2_400M_050219_1,6377 DOHH2_400M_050219_1,6377,TPLKKVIL False True TPLKKVIL 35.098141 456.317858874798 932048.4375 6365.0 ENSG00000164934|ENST00000612750|DCAF13;;ENST00000495256.1_1_7:105766226-105766550:+|nuORF 3.4890736738840737 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6378 35.113 800.0 189530.0 25 0 21290.0 -1 QAEEHALCRCM 11 128 710.7916268070485 1419.5687006808969 2 710.7927734255791 MULTI CID FTMS 0 0 0 6365 138934.78125 0.6179938991716134 -2 0.2802200317382812 13 2 Carbamidomethyl (C),Oxidation (M) _QAEEHALC(Carbamidomethyl (C))RC(Carbamidomethyl (C))M(Oxidation (M))_ ENST00000291295.13_1_19:47112676-47112886:+|nuORF 7.608950283845883 0.8392484121837455 1 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 77.401 0.0 0.0 5.4524 0.0 0.0 335.1232772795599 0.0 335.1232772795599 0.0 42.75264802391148 0.0 0.0 0 0.8182503180159344 0.0 1.079689690656103 1.2302046884880935 DEAQQNA{M(Oxidation (M))|F}Y 5.4524 - 1360 1 2.098 110483.6 0.7200000286102295 2942 3434 6365 DOHH2_400M_050219_1,6378 DOHH2_400M_050219_1,6378,QAEEHALCRCM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6379 35.118 241.0 318050.0 25 0 23754.0 + 4845 DFNVKKLAA 9 112 503.288543623364 1004.562534313528 2 503.2883788943291 MULTI CID FTMS 0 0 0 6365 132122.5625 1.0 0 0.0 14 Unmodified _DFNVKKLAA_ ENSG00000097033|ENST00000370558|SH3GLB1;ENST00000535010.5_1_1:87170570-87185198:+|nuORF;nc|ENSG00000097033|Q9Y371-2|SH3GLB1 29.081581746732265 0.1611639662936252 1 D{M(Oxidation (M))|F}NV 4 5 35.068 0.0 0.0 3.4908 0.0 0.0 0.0 526.3353365533811 526.3353365533811 23.473936379523565 0.0 0.0 0.0 0 0.6139829889124311 0.0 0.0 0.0 + D{M(Oxidation (M))|F}NV 3.4908 + + 120 + 1 2.098 60120.5 1.0 2943 3434 6365 DOHH2_400M_050219_1,6379 DOHH2_400M_050219_1,6379,DFNVKKLAA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6380 35.125 390.0 189400.0 25 0 14838.0 + 40714 VLGYKQTL 8 111 461.274427885717 920.534302838234 2 461.2747985720634 MULTI CID FTMS 0 0 0 6365 123974.2890625 1.0 0 0.0 15 Unmodified _VLGYKQTL_ ENSG00000156482|ENST00000287038|RPL30;ENST00000429309.1_1_3:32676926-32677028:-|nuORF;ENST00000518164.5_1_8:99037863-99057595:-|nuORF 15.847184025352805 0.6768015514314958 1 [{I|L}V][{M(Oxidation (M))|F}T]KKW 7 5 + 27.838 0.0 0.0 3.0241 3.0241 74.584 0.0 0.0 0.0 15.363686622918047 6.170211930945069 6.170211930945069 6.170211930945069 0 0.4247425010840047 2.0 0.0 0.2887254899964357 [{I|L}V][{M(Oxidation (M))|F}T]KKW;[{I|L}V][YG]K[QT]{I|L};[{I|L}V][YG][RK]W;[{I|L}V][HK]T[NP]{I|L};[{I|L}V][HK]T[QP]V;[{I|L}V][HK]T{[VA]|[{I|L}G]}[PG] 3.0241;2.3538;2.2782;1.9207;1.2512;0.94708 -;+;-;-;-;- + 105 + 1 2.098 60324.6 1.0 2944 3434 6365 DOHH2_400M_050219_1,6380 DOHH2_400M_050219_1,6380,VLGYKQTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6381 35.129 224.0 342390.0 25 0 37826.0 + 45324 YSKPRLATF 9 102 541.8034919144 1081.5924308955998 2 541.8054687380791 MULTI CID FTMS 0 0 0 6365 112219.3125 0.460376712157538 -1 0.1135406494140625 16 Unmodified _YSKPRLATF_ ENSG00000167283|ENST00000300688|ATP5MG;ENST00000527186.1_1_11:118277587-118279810:+|nuORF;ENST00000533172.5_1_11:118272380-118279724:+|nuORF;ENST00000534385.1_1_11:118272380-118277824:+|nuORF 29.84058131909904 0.1515068451768857 1 YSKP 4 5 52.423 0.0 0.0 4.8468 0.0 0.0 0.0 603.3237398736936 603.3237398736936 34.94850021680094 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + YSKP 4.8468 + + 88 + 1 2.098 65704.3 1.0 2945 3434 6365 DOHH2_400M_050219_1,6381 DOHH2_400M_050219_1,6381,YSKPRLATF False True YSKPRLATF 35.128853 541.805468738079 1206007.625 6365.0 ENST00000534385.1_1_11:118272380-118277824:+|nuORF;;ENST00000527186.1_1_11:118277587-118279810:+|nuORF;;ENST00000533172.5_1_11:118272380-118279724:+|nuORF;;ENSG00000167283|ENST00000300688|ATP5MG 6.637301762898763 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6382 35.138 546.0 163780.0 25 0 12280.0 + 42205 VSEVSSLNY 9 134 499.2464740967861 996.4783952603724 2 499.2464172244072 MULTI CID FTMS 0 0 0 6365 113412.1015625 1.0 0 0.0 17 Unmodified _VSEVSSLNY_ ENSG00000117000|ENST00000372771|RLF 21.74664581756881 0.2544899275067181 1 {[TV]|[{I|L}S]}DV 4 7 17.484 0.0 0.0 1.7546 0.0 0.0 0.0 579.2438426082816 579.2438426082816 -0.5752873195556418 0.0 -0.5752873195556418 0.0 0 0.0 0.7958800173440752 0.6505149978319906 0.0 {[TV]|[{I|L}S]}DV 1.7546 - 289 1 2.098 69885.8 1.0 2946 3434 6365 DOHH2_400M_050219_1,6382 DOHH2_400M_050219_1,6382,VSEVSSLNY False True VSEVSSLNY 35.138426 499.246417224407 551545.625 6365.0 ENSG00000117000|ENST00000372771|RLF 3.6106290022532144 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6383 35.153 800.0 101740.0 25 0 5953.0 -1 0 71 910.9159092239933 1819.8172655147864 2 911.4157592654228 MULTI CID FTMS 0 0 0 6365 103647.0703125 0.2241587220807448 3 -0.3051528930664062 18 1 {I|L}NQ[WR]K[C(Carbamidomethyl (C))C]{I|L}Q 10 -1 27.357 0.0 0.0 1.5033 0.0 0.0 472.17773225613865 0.0 472.17773225613865 0.0 17.179250024847263 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 {I|L}NQ[WR]K[C(Carbamidomethyl (C))C]{I|L}Q 1.5033 - 123 + 1 2.098 57263.0 0.5299999713897705 2947 3434 6365 DOHH2_400M_050219_1,6383 DOHH2_400M_050219_1,6383, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6384 35.158 242.0 331450.0 25 0 33654.0 + 5299 DLDDAQRTLY 10 102 605.2917682249905 1208.568983516781 2 605.2919189333916 MULTI CID FTMS 0 0 0 6365 94622.0859375 0.5281968186849273 -1 0.1135406494140625 19 Unmodified _DLDDAQRTLY_ ENSG00000227124|ENST00000652011|ZNF717;ENST00000491507.1_1_3:75765690-75790926:-|nuORF 51.487983226225225 0.0714176344394665 1 {NN|[MP]|[D{I|L}]|[EV]}DDAQ 6 4 63.971 0.0 0.0 5.2931 0.0 0.0 0.0 548.2842286395853 548.2842286395853 15.86188426947686 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.3494850021680094 0.3252574989159953 + {NN|[MP]|[D{I|L}]|[EV]}DDAQ 5.2931 + + 244 + 1 2.098 59155.8 1.0 2948 3434 6365 DOHH2_400M_050219_1,6384 DOHH2_400M_050219_1,6384,DLDDAQRTLY True True DLDDAQRTLY 35.157976 605.291918933392 1097934.25 6365.0 ENSG00000227124|ENST00000652011|ZNF717;;ENST00000491507.1_1_3:75765690-75790926:-|nuORF 6.620713551839192 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6385 35.172 800.0 136830.0 25 0 5160.5 + 440 AEFDTPGHTL 10 188 544.2567325399046 1086.4989121466092 2 544.2573119997978 MULTI CID FTMS 0 0 0 6365 107024.6328125 1.0 0 0.0 20 Unmodified _AEFDTPGHTL_ ENSG00000213614|ENST00000268097|HEXA;ENST00000563762.5_1_15:72640446-72647950:-|nuORF;ENST00000566672.5_1_15:72638574-72647950:-|nuORF;ENST00000568777.5_1_15:72638642-72646100:-|nuORF;nc|ENSG00000213614|P06865-2|HEXA 58.6788170122104 0.0400518768368984 1 {[CP]|[EA]}{M(Oxidation (M))|F}DTPG[HT]{I|L} 10 0 + 47.596 0.0 0.0 4.3807 4.3807 77.08 0.0 0.0 0.0 13.120253799654442 4.54258371760158 4.54258371760158 4.54258371760158 0 0.4247425010840047 0.585026652029182 2.004432191740108 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}DTPG[HT]{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}DTPG[{I|L}T]H;{[CP]|[EA]}{M(Oxidation (M))|F}DT[RV]SY;{[CP]|[EA]}{M(Oxidation (M))|F}DT[TA]HVP;{[MS]|[{M(Oxidation (M))|F}A]}EDTPG[HT]{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}DT[TA][VP]H;{[MS]|[{M(Oxidation (M))|F}A]}EDTPG[{I|L}T]H;{[MS]|[{M(Oxidation (M))|F}A]}EDT[RV]SY;[{I|L}T]H[TA]TDE{[CP]|[EA]};[PG][KS]GPTDE{[CP]|[EA]} 4.3807;3.9626;3.9548;3.4006;2.7833;2.4693;2.3652;2.3574;2.2749;2.1873 +;-;-;-;-;-;-;-;-;- + 597 + 1 2.098 86837.9 0.5600000023841858 2949 3434 6365 DOHH2_400M_050219_1,6385 DOHH2_400M_050219_1,6385,AEFDTPGHTL True True AEFDTPGHTL 35.171807 544.257311999798 491248.15625 6365.0 ENSG00000213614|ENST00000268097|HEXA;;ENST00000563762.5_1_15:72640446-72647950:-|nuORF;;ENST00000568777.5_1_15:72638642-72646100:-|nuORF;;nc|ENSG00000213614|P06865-2|HEXA;;ENST00000566672.5_1_15:72638574-72647950:-|nuORF 6.742282072703044 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6387 35.189 777.0 121330.0 25 0 8431.9 + 20266 LLDQGQLNKY 10 143 596.3222449050177 1190.6299368768352 2 596.3223144412041 MULTI CID FTMS 0 0 0 6386 91821.71875 0.1011983742932065 2 -0.1776847839355468 1 Unmodified _LLDQGQLNKY_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 36.506200033944 0.1944608063770638 1 {I|L}{I|L}DQ{[QG]|[NA]}{I|L}NKY 10 0 + 74.25 0.0 0.0 6.2362 6.2362 88.21 0.0 0.0 0.0 60.02828862210755 13.521825181113629 13.521825181113629 9.164539485499262 0 0.7302046884880937 2.0 0.0 0.805462187404089 + + {I|L}{I|L}DQ{[QG]|[NA]}{I|L}NKY;{I|L}{I|L}DQ{[QG]|[NA]}{I|L}GGKY;{I|L}{I|L}D[AG]{[QG]|[NA]}{I|L}NKY;{I|L}[RH][{M(Oxidation (M))|F}T]{I|L}NKY 6.2362;5.4665;5.4665;1.4662 +;-;-;- + 236 + 1 2.107 70858.8 1.0 2950 3435 6386 DOHH2_400M_050219_1,6387 DOHH2_400M_050219_1,6387,LLDQGQLNKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6388 35.19 35.0 1600100.0 25 0 124480.0 + 26390 NTDLMTSQCY 10 92 588.2385436899773 1174.4625344467545 2 588.2394897341728 MULTI CID FTMS 0 0 0 6386 1536281.0 0.3498616124554369 -1 0.1274681091308593 2 Unmodified _NTDLMTSQCY_ REV__ENSG00000197121|ENST00000354764|PGAP1;REV__ENST00000470179.5_1_2:197712669-197791463:-|nuORF;REV__nc|ENSG00000197121|Q75T13-2|PGAP1;REV__nc|ENSG00000197121|Q75T13-3|PGAP1;REV__nc|ENSG00000197121|Q75T13-4|PGAP1 19.256988751693697 0.5244284437930726 1 [NS]E{I|L} 4 -1 43.165 0.0 0.0 3.6753 0.0 0.0 0.0 728.2365267165388 728.2365267165388 20.46241115504975 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.903598431600422 0.9436726795685342 [NS]E{I|L} 3.6753 - 142 1 2.107 44244.5 1.0 2951 3435 6386 DOHH2_400M_050219_1,6388 DOHH2_400M_050219_1,6388,NTDLMTSQCY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6389 35.192 56.0 1113300.0 25 0 146330.0 + 907 AEYNSDLHQF 10 76 612.2696886333393 1222.5248243334786 2 612.2704345583916 MULTI CID FTMS 0 0 0 6386 878552.0 0.604251657810909 -1 0.1274681091308593 3 Unmodified _AEYNSDLHQF_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 67.83816525789305 0.0190062514522628 1 {[CP]|[EA]}YNSD{I|L}H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 10 0 + 70.327 0.0 0.0 5.7526 5.7526 86.506 0.0 0.0 0.0 27.970814288681737 13.141792244367268 13.141792244367268 9.164539485499262 0 0.7302046884880937 0.0 0.3252574989159953 1.7376954943324543 + + {[CP]|[EA]}YNSD{I|L}H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[CP]|[EA]}YGGSD{I|L}H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[H{I|L}]DSQ{M(Oxidation (M))|F}DY[QA];[H{I|L}]DSN[{M(Oxidation (M))|F}E]Y[QA];{[CP]|[EA]}Y{[SA]|[TG]}[RD]H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[H{I|L}]DS[AG]{M(Oxidation (M))|F}DY[QA];[H{I|L}]DSNY[{M(Oxidation (M))|F}E][QA];[PG][NP]SQ{M(Oxidation (M))|F}DY[QA];[YN][R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}DY[QA];[H{I|L}]DSGG[{M(Oxidation (M))|F}E]Y[QA] 5.7526;5.003;2.4468;1.8751;1.8538;1.6972;1.609;1.5157;1.1546;1.1254 +;-;-;-;-;-;-;-;-;- + 551 + 1 2.107 52963.6 1.0 2952 3435 6386 DOHH2_400M_050219_1,6389 DOHH2_400M_050219_1,6389,AEYNSDLHQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6390 35.194 114.0 675080.0 25 0 102440.0 + 31648 RRGDFIHVM 9 77 565.797690555298 1129.580828177396 2 565.7980224490166 MULTI CID FTMS 0 0 0 6386 417595.78125 1.0 0 0.0 4 Unmodified _RRGDFIHVM_ ENSG00000177885|ENST00000316804|GRB2;ENST00000462266.1_1_17:73316451-73322393:-|nuORF;nc|ENSG00000177885|P62993-2|GRB2 32.037481411007896 0.1235546156350648 1 [HV][KC]{M(Oxidation (M))|F}{I|L}[PG]VM 10 6 + 44.71 0.0 0.0 3.9581 3.9581 78.908 0.0 0.0 0.0 3.295671638727029 19.260139618586365 3.295671638727029 8.30530004019301 0 0.4247425010840047 1.3010299956639813 0.0 0.3807196863200844 [HV][KC]{M(Oxidation (M))|F}{I|L}[PG]VM;M[W{I|L}][KS]VHVM;[HV][KC]{M(Oxidation (M))|F}{I|L}[RP]M;[HK]H{I|L}[QT]HVM;{[QN]|[E{I|L}]|[KN]}WW{I|L}[PG]VM;M[W{I|L}][KS]VM[HV];[HK]H{I|L}[QT]M[HV];{[QN]|[E{I|L}]|[KN]}WW{I|L}[RP]M 3.9581;3.2229;2.6668;2.4482;2.1423;1.9378;1.1632;0.85569 -;-;-;-;-;-;-;- 175 1 2.107 63301.3 1.0 2953 3435 6386 DOHH2_400M_050219_1,6390 DOHH2_400M_050219_1,6390,RRGDFIHVM True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6391 35.197 136.0 435710.0 25 0 43906.0 + 33472 SIGSAESLIS 10 94 482.2543138245159 0 482.2537414431572 PEAK CID FTMS 0 0 0 6386 299492.96875 0.7107885837138226 -1 0.1274681091308593 5 Unmodified _SIGSAESLIS_ ENSG00000130413|ENST00000687296|STK33;nc|ENSG00000130413|Q9BYT3-2|STK33 56.17704186161178 0.029475855353616 1 {I|L}SKES 5 6 42.849 0.0 0.0 4.4519 0.0 0.0 218.1309647687592 197.05735193424064 415.1883167029998 0.0 0.0 0.0 0.0 0 0.5 0.0 1.7416440611282624 0.0 {I|L}SKES 4.4519 - 215 + 1 2.107 51304.9 1.0 2954 3435 6386 DOHH2_400M_050219_1,6391 DOHH2_400M_050219_1,6391,SIGSAESLIS True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6392 35.2 163.0 290810.0 25 0 37521.0 + 124 AALDKATVL 9 89 451.2713378600436 900.5281227868871 2 451.2712890505791 MULTI CID FTMS 0 0 0 6386 254941.25 1.0 0 0.0 6 Unmodified _AALDKATVL_ ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4 25.399314129420983 0.2080152500878129 1 AATA{I|L}AATV{I|L} 10 4 + 37.889 0.0 0.0 4.2074 4.2074 76.297 0.0 0.0 0.0 6.272022669357099 11.919920528421372 6.272022669357099 4.252261260283049 0 0.7429928190999391 1.5228787452803376 0.5387254899964358 0.0 AATA{I|L}AATV{I|L};AATA{I|L}TAAV{I|L};AATA{I|L}S[VG]V{I|L};AATAT{I|L}AAV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]TV[RV];{[TV]|[{I|L}S]}N{I|L}AATV{I|L};AATATV[VG]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]SRV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]S{I|L}[RV];{NN|[MP]|[D{I|L}]|[EV]}[KA]AATV{I|L} 4.2074;3.7352;3.4312;3.4008;3.1199;3.097;3.0968;2.8839;2.8159;2.6315 -;-;-;-;-;-;-;-;-;- 505 1 2.107 41070.6 1.0 2955 3435 6386 DOHH2_400M_050219_1,6392 DOHH2_400M_050219_1,6392,AALDKATVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6393 35.205 251.0 265060.0 25 0 14945.0 + 22903 LSDHLINQGY 10 104 580.2905338892275 1158.566514845255 2 580.2907592654228 MULTI CID FTMS 0 0 0 6386 192601.140625 1.0 0 0.0 7 Unmodified _LSDHLINQGY_ ENSG00000101194|ENST00000370351|SLC17A9;ENST00000488738.5_1_20:61595350-61598131:+|nuORF;nc|ENSG00000101194|Q9BYT1-2|SLC17A9 36.506200033944 0.1944608063770638 1 [H{I|L}]DS{I|L}{I|L}NQGY 10 2 + 71.165 0.0 0.0 6.1425 6.1425 86.514 0.0 0.0 0.0 4.259687322722812 64.17525978212623 4.259687322722812 8.02378753635658 0 1.25 0.0 0.2742275032520141 0.3807196863200844 [H{I|L}]DS{I|L}{I|L}NQGY;[H{I|L}]DS{I|L}N{I|L}QGY;[H{I|L}]DS{I|L}{I|L}GGQGY;[H{I|L}]DS{I|L}{I|L}N[AG]GY;[HT]QN{I|L}{I|L}[DV]GY;[HT]QN{I|L}{I|L}[RD]Y;[H{I|L}]DS{I|L}GG{I|L}QGY;[H{I|L}]DS{I|L}N{I|L}[AG]GY;[H{I|L}]{[ET]|[MV]}VVNQGY;[H{I|L}]D[{I|L}T]VNQGY 6.1425;5.4499;5.3515;5.3515;4.8682;4.7359;4.6589;4.6589;4.5472;4.2874 -;-;-;-;-;-;-;-;-;- 360 1 2.107 54692.4 1.0 2956 3435 6386 DOHH2_400M_050219_1,6393 DOHH2_400M_050219_1,6393,LSDHLINQGY False True LSDHLINQGY 35.204761 580.291 1182990.125 6386.0 nc|ENSG00000101194|Q9BYT1-2|SLC17A9;;ENST00000488738.5_1_20:61595350-61598131:+|nuORF;;ENSG00000101194|ENST00000370351|SLC17A9 8.259555339813232 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6394 35.211 364.0 372470.0 25 0 31225.0 + 666 AEMEERFYRY 10 124 465.21157832567707 1392.6129055772312 3 465.2119323611259 MULTI CID FTMS 0 0 0 6386 190062.34375 1.0 0 0.0 8 Unmodified _AEMEERFYRY_ ENSG00000111642|ENST00000544040|CHD4;ENST00000536999.1_1_12:6705170-6707214:-|nuORF;nc|ENSG00000111642|Q14839-2|CHD4 48.07275321834293 0.0914622731454193 1 AEMEER 6 4 78.479 0.0 0.0 5.6354 0.0 0.0 0.0 644.2831514947874 644.2831514947874 54.6621514635215 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.805462187404089 1.024227503252014 + AEMEER 5.6354 + + 252 + 1 2.107 107719.9 1.0 2957 3435 6386 DOHH2_400M_050219_1,6394 DOHH2_400M_050219_1,6394,AEMEERFYRY True True AEMEERFYRY 35.211307 465.211932361126 1297971.125 6386.0 ENST00000536999.1_1_12:6705170-6707214:-|nuORF;;ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 6.159817059834798 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6395 35.216 228.0 451400.0 25 0 29425.0 40959 VLVMPLSIIY 10 145 383.2308659965709 0 383.2321960330009 PEAK CID FTMS 0 0 0 6386 186776.5 1.0 0 0.0 9 Unmodified _VLVMPLSIIY_ ENSG00000168830|ENST00000305344|HTR1E 15.847184025352805 0.3304572136216667 1 TVK 3 9 11.471 0.0 0.0 1.5006 0.0 0.0 53.005429484134034 380.2109774225219 433.216406906656 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 TVK 1.5006 - 27 + 1 2.107 82596.3 1.0 2958 3435 6386 DOHH2_400M_050219_1,6395 DOHH2_400M_050219_1,6395,VLVMPLSIIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6396 35.22 265.0 319210.0 25 0 61498.0 5118 DIEYYEKVIED 11 92 472.5565058960818 1414.6476882884456 3 472.5562316775322 MULTI CID FTMS 0 0 0 6386 172593.828125 1.0 0 0.0 10 Unmodified _DIEYYEKVIED_ ENSG00000184205|ENST00000375442|TSPYL2;ENST00000556808.1_1_X:53114705-53115656:+|nuORF 4.5288652416199255 0.8537804541365391 1 V 1 10 11.783 0.0 0.0 0.83291 0.0 0.0 1297.5682185392252 0.0 1297.5682185392252 0.0 0.6734928694872799 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.83291 + + 30 + 1 2.107 72148.9 1.0 2959 3435 6386 DOHH2_400M_050219_1,6396 DOHH2_400M_050219_1,6396,DIEYYEKVIED False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6397 35.23 560.0 257570.0 25 0 15934.0 + 40958 LRNKVIIEY 9 148 574.3446130934243 1146.6746732536485 2 574.3452026247978 MULTI CID FTMS 0 0 0 6386 163547.484375 1.0 0 0.0 11 Unmodified _VLVMPLSIIY_ nc|ENSG00000117174|Q9NWK9-2|ZNHIT6;ENSG00000117174|ENST00000370574|ZNHIT6 20.453626601364224 0.5043500229302764 1 {[QN]|[E{I|L}]|[KN]}{I|L}[RV]{I|L}{I|L}EY 9 6 + 40.696 0.0 0.0 3.5491 3.5491 70.557 0.0 0.0 0.0 6.064469534817143 8.489853770435332 6.064469534817143 1.474315640635588 0 0.3494850021680094 1.154901959985743 0.4559771852360796 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}[RV]{I|L}{I|L}EY;{[QN]|[E{I|L}]|[KN]}{I|L}[RV]E{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}{I|L}[RV]{I|L}E{I|L}Y;{I|L}{I|L}E[RV]{I|L}{I|L}EY;{I|L}{I|L}E[RV]E{I|L}{I|L}Y;{I|L}{I|L}E[RV]{I|L}E{I|L}Y;[{I|L}V][W{I|L}]V{I|L}{I|L}EY;[{I|L}V][W{I|L}]VE{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}{I|L}WVV{I|L}{I|L}Y;[{I|L}V][W{I|L}]V{I|L}E{I|L}Y 3.5491;3.4205;3.3571;3.0202;2.8916;2.8282;2.7895;2.6609;2.629;2.5975 -;-;-;-;-;-;-;-;-;- 341 1 2.107 110168.9 1.0 2960 3435 6386 DOHH2_400M_050219_1,6397 DOHH2_400M_050219_1,6397,VLVMPLSIIY False False LRNKVIIEY 35.230305 574.345202624798 1164825.625 6386.0 nc|ENSG00000117174|Q9NWK9-2|ZNHIT6;;ENSG00000117174|ENST00000370574|ZNHIT6 0.4936036666234334 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6398 35.245 800.0 113400.0 25 0 5273.0 + 36787 TEFEDIKSGY 10 132 594.7743149821101 1187.5340770310202 2 594.7744018435478 MULTI CID FTMS 0 0 0 6386 126649.9921875 0.4314564370349079 1 -0.0918426513671875 12 Unmodified _TEFEDIKSGY_ ENSG00000119335|ENST00000322030|SET;ENSG00000230667|ENST00000596516|SETSIP;ENST00000437270.1_1_9:140535772-140535991:-|nuORF;ENST00000497538.1_1_3:155705188-155705881:+|nuORF;ENST00000514799.1_1_5:59755891-59756539:-|nuORF;nc|ENSG00000119335|Q01105-3|SET;nc|ENSG00000119335|Q01105-4|SET;nc|ENSG00000119335|Q01105|SET;nc|ENSG00000230667|P0DME0-1|SETSIP 21.59015148037692 0.4836074274810599 1 [DP][Q{I|L}]{I|L}DE{M(Oxidation (M))|F}[DP] 10 10 + 37.411 0.0 0.0 3.1503 3.1503 70.598 0.0 0.0 0.0 1.4950692809903643 21.92689429499758 1.4950692809903643 2.2577249674798594 0 0.75 1.154901959985743 0.0 0.0 [DP][Q{I|L}]{I|L}DE{M(Oxidation (M))|F}[DP];[DP][Q{I|L}]{I|L}DEP{[{M(Oxidation (M))|F}D]|MM};{[MG]|[TS]}[HK]{I|L}DE{M(Oxidation (M))|F}[DP];{[MG]|[TS]}[HK]{I|L}DEP{[{M(Oxidation (M))|F}D]|MM};{[ET]|[MV]}{M(Oxidation (M))|F}V{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM};{[ET]|[MV]}{M(Oxidation (M))|F}E[HT][Q{I|L}][PS];{[DS]|[MA]|[CV]|TT}[Q{I|L}][HT]EP{[{M(Oxidation (M))|F}D]|MM};[{M(Oxidation (M))|F}T]EV{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM};{[ET]|[MV]}{M(Oxidation (M))|F}V{[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}{[{M(Oxidation (M))|F}D]|MM};[{M(Oxidation (M))|F}E]D{I|L}[KQ]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM} 3.1503;2.9602;2.206;2.0159;1.6852;1.5892;1.3991;1.198;1.0581;0.97694 -;-;-;-;-;-;-;-;-;- 533 1 2.107 74842.4 0.6499999761581421 2961 3435 6386 DOHH2_400M_050219_1,6398 DOHH2_400M_050219_1,6398,TEFEDIKSGY False True TEFEDIKSGY 35.245311 594.774401843548 1566832.75 6386.0 ENST00000437270.1_1_9:140535772-140535991:-|nuORF;;ENST00000514799.1_1_5:59755891-59756539:-|nuORF;;ENSG00000119335|ENST00000322030|SET;;ENST00000497538.1_1_3:155705188-155705881:+|nuORF;;ENSG00000230667|ENST00000596516|SETSIP;;nc|ENSG00000119335|Q01105|SET;;nc|ENSG00000230667|P0DME0-1|SETSIP;;nc|ENSG00000119335|Q01105-4|SET;;nc|ENSG00000119335|Q01105-3|SET 7.3762640953063965 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6399 35.259 800.0 117830.0 25 0 10344.0 + 25393 NDMRQEYEQL 10 128 663.2928232903578 1324.5710936475157 2 663.2919799685478 MULTI CID FTMS 0 0 0 6386 92412.6796875 1.0 0 0.0 13 Unmodified _NDMRQEYEQL_ CON__P35527;ENSG00000171403|ENST00000246662|KRT9 12.872603262515298 0.6315522313594999 1 [YE]{[ET]|[MV]}[HN]YEQ{I|L} 10 5 + 24.763 0.0 0.0 1.8695 1.8695 71.874 0.0 0.0 0.0 4.651049597579739 12.0729649388911 4.651049597579739 4.936461494099657 0 0.3913577739914503 0.9208187539523752 0.0 0.4247425010840047 [YE]{[ET]|[MV]}[HN]YEQ{I|L};[AG]EC[{I|L}A][DN]YEQ{I|L};[AG]E{[WT]|[RM]}[DN]YEQ{I|L};{[WT]|[RM]}TY[HN][C(Carbamidomethyl (C))C]Q{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}C[{I|L}A][DN]YEQ{I|L};[DN]M[{I|L}A][DN]YEQ{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WT]|[RM]}[DN]YEQ{I|L};{[WT]|[RM]}TY[HN][C(Carbamidomethyl (C))C]{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C))R][DN]YEQ{I|L};{[QN]|[E{I|L}]|[KN]}E[YE]{[WS]|[C(Carbamidomethyl (C)){I|L}]}EQ{I|L} 1.8695;1.4968;1.4522;1.3818;1.2571;1.2556;1.2151;1.1181;0.87125;0.86996 -;-;-;-;-;-;-;-;-;- 229 1 2.107 75736.0 0.5099999904632568 2962 3435 6386 DOHH2_400M_050219_1,6399 DOHH2_400M_050219_1,6399,NDMRQEYEQL False True NDMRQEYEQL 35.259149 663.291979968548 455304.25 6386.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 5.1733419100443525 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 6400 35.264 241.0 256690.0 25 0 13069.0 + -1 STSMRTYENPF 11 95 674.7960528280597 1347.577552722919 2 675.2973510622978 MULTI CID FTMS 0 0 0 6386 319899.125 1.0 0 0.0 14 Oxidation (M) _STSM(Oxidation (M))RTYENPF_ REV__ENSG00000171365|ENST00000376091|CLCN5;REV__nc|ENSG00000171365|P51795-1|CLCN5 15.248480904072842 0.7179608125786238 1 EAQQN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 7 -1 18.096 0.0 0.0 1.3429 0.0 0.0 515.2140370099625 0.0 515.2140370099625 0.0 4.997454284423242 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 EAQQN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.3429 - 163 1 2.107 51714.7 1.0 2963 3435 6386 DOHH2_400M_050219_1,6400 DOHH2_400M_050219_1,6400,STSMRTYENPF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6402 35.269 29.0 1854000.0 25 0 174650.0 43500 WWWWIWWQWW 10 63 874.9042007258124 1747.7938485184247 2 874.9060546755791 MULTI CID FTMS 0 0 0 6401 1542205.75 0.5676365380336594 2 -0.2258987426757812 1 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 1 [NP]{I|L}NA[QP]QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 16 14 + 79.958 0.0 0.0 4.5748 4.5748 84.797 0.0 0.0 0.0 13.750391066403964 60.50753267355002 13.750391066403964 12.257724967479843 0 1.3807196863200843 0.958607314841775 0.0 1.274227503252014 [NP]{I|L}NA[QP]QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA[QP]QDAN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}NA[QP]QWN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.5748;3.8735;3.4896 -;-;- 311 1 2.122 42457.1 1.0 2964 3436 6401 DOHH2_400M_050219_1,6402 DOHH2_400M_050219_1,6402,WWWWIWWQWW False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 6403 35.27 71.0 732810.0 25 0 180500.0 + 45276 YSDKYGLGY 9 75 533.2478662087896 1064.481179484379 2 533.2483398318291 MULTI CID FTMS 0 0 0 6401 616723.375 0.027210733117697 4 -0.4523124694824219 2 Unmodified _YSDKYGLGY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 43.77239144664712 0.0547478964384323 1 YSDK 4 5 58.22 0.0 0.0 5.4693 0.0 0.0 0.0 568.2414644830686 568.2414644830686 23.84134988843236 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.3807196863200844 0.0 + YSDK 5.4693 + + 315 + 1 2.122 43839.8 1.0 2965 3436 6401 DOHH2_400M_050219_1,6403 DOHH2_400M_050219_1,6403,YSDKYGLGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6404 35.272 44.0 1346000.0 25 0 119060.0 + 832 AETEPIVKM 9 81 509.2673037496936 1016.5200545661872 2 509.2677184939384 MULTI CID FTMS 0 0 0 6401 1195365.875 0.7442805807440854 -1 0.0918426513671875 3 Unmodified _AETEPIVKM_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 30.63653989081413 0.1413794767160703 1 {[CP]|[EA]}TE[{I|L}P]VKM 9 0 + 22.579 0.0 0.0 2.2212 2.2212 77.944 0.0 0.0 0.0 6.381127850452231 3.1935402242081103 3.1935402242081103 9.44537812595911 0 0.6435078169319297 0.0 0.0 0.0 + + {[CP]|[EA]}TE[{I|L}P]VKM;[MN]{[QG]|[NA]}[{I|L}P]VKM;{[CP]|[EA]}[WP][KQ]KM 2.2212;1.292;0.6811 +;-;- + 117 + 1 2.122 53926.1 1.0 2966 3436 6401 DOHH2_400M_050219_1,6404 DOHH2_400M_050219_1,6404,AETEPIVKM False True AETEPIVKM 35.271509 509.267718493938 8073206.5 6401.0 ENST00000518442.5_1_8:109247181-109261015:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 6.412684917449951 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6405 35.274 147.0 680120.0 25 0 69154.0 + 5736 DPMKARVVL 9 95 514.799600907026 1027.584648880852 2 514.8000366091728 MULTI CID FTMS 0 0 0 6401 414795.21875 0.0575289237695526 -2 0.2193107604980468 4 Unmodified _DPMKARVVL_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 53.832793166522166 0.0319663582346103 1 DPMKARVV{I|L} 9 0 + 70.358 0.0 0.0 6.8469 6.8469 95.487 0.0 0.0 0.0 46.50205285828572 6.602285141594066 6.602285141594066 46.33294675480037 0 1.3737125054200234 2.0 0.0 0.0 + + DPMKARVV{I|L};D{I|L}[WQ]RVV{I|L};{I|L}D[WQ]RVV{I|L};[{M(Oxidation (M))|F}V][QP]ARVV{I|L} 6.8469;2.338;2.1655;0.83351 +;-;-;- + 103 + 1 2.122 83066.6 1.0 2967 3436 6401 DOHH2_400M_050219_1,6405 DOHH2_400M_050219_1,6405,DPMKARVVL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6406 35.278 178.0 456690.0 25 0 52592.0 + 877 AEVEGAGVKAW 11 108 558.7882143610939 1115.5618757889877 2 558.7883788943291 MULTI CID FTMS 0 0 0 6401 396185.90625 0.7444333740019426 -1 0.0918426513671875 5 Unmodified _AEVEGAGVKAW_ ENSG00000197070|ENST00000371421|ARRDC1;ENST00000491911.5_1_9:140508423-140509541:+|nuORF 49.52724829834842 0.1202481389936634 1 {[CP]|[EA]}VEGAGVKAW 11 0 + 67.941 0.0 0.0 6.0903 6.0903 79.946 0.0 0.0 0.0 22.51789816242496 9.841835760654646 9.841835760654646 1.8045606445813007 0 1.3807196863200843 0.5686362358410126 0.4247425010840047 0.0 + + {[CP]|[EA]}VEGAGVKAW;{[CP]|[EA]}VEQGVKAW;{[CP]|[EA]}VEGQVKAW;{[CP]|[EA]}VWAGVKAW;{[CP]|[EA]}VWQVKAW;{NN|[MP]|[D{I|L}]|[EV]}A[{I|L}A]EVE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}AN[KA]VE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}A[{I|L}A]EW[W{I|L}];{[CP]|[EA]}V[{I|L}A]EVE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}AN[KA]GE[W{I|L}] 6.0903;5.9286;5.5009;5.1201;4.5346;4.1453;3.9914;3.9875;3.951;3.8794 +;-;-;-;-;-;-;-;-;- + 2651 + 1 2.122 66980.9 1.0 2968 3436 6401 DOHH2_400M_050219_1,6406 DOHH2_400M_050219_1,6406,AEVEGAGVKAW True True AEVEGAGVKAW 35.277917 558.788378894329 3089274.75 6401.0 ENSG00000197070|ENST00000371421|ARRDC1;;ENST00000491911.5_1_9:140508423-140509541:+|nuORF 7.074191411336263 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6407 35.286 454.0 254240.0 25 0 14120.0 + 697 AENLPEQEI 9 142 521.7561592302675 0 521.7562744021416 PEAK CID FTMS 0 0 0 6401 131088.265625 0.6195062852612772 -1 0.0918426513671875 6 Unmodified _AENLPEQEI_ ENSG00000197102|ENST00000360184|DYNC1H1 41.95555342248728 0.0536712386667488 1 {I|L}N 2 8 14.464 0.0 0.0 1.3888 0.0 0.0 614.2909752117095 197.05727564029533 811.3482508520048 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}N 1.3888 - 240 + 1 2.122 95192.4 1.0 2969 3436 6401 DOHH2_400M_050219_1,6407 DOHH2_400M_050219_1,6407,AENLPEQEI True True AENLPEQEI 35.285976 521.756274402142 1159153.625 6401.0 ENSG00000197102|ENST00000360184|DYNC1H1 5.029094854990642 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6408 35.3 800.0 143730.0 25 0 18093.0 + 14410 IFKDHVSL 8 149 479.77086471798617 957.5271765027724 2 479.7715331912041 MULTI CID FTMS 0 0 0 6401 112599.859375 1.0 0 0.0 7 Unmodified _IFKDHVSL_ ENSG00000198258|ENST00000586895|UBL5;ENST00000588141.1_1_19:9939136-9939570:+|nuORF;ENST00000589372.1_1_19:9939013-9939570:+|nuORF 49.93300154707207 0.1395624531867191 1 {I|L}{M(Oxidation (M))|F}KDHVS{I|L} 8 0 + 43.784 0.0 0.0 4.5727 4.5727 80.506 0.0 0.0 0.0 13.497196485353946 7.596678446896306 7.596678446896306 7.596678446896306 0 1.048455006504028 0.0 0.6747425010840047 0.0 + + {I|L}{M(Oxidation (M))|F}KDHVS{I|L};{I|L}{M(Oxidation (M))|F}KDHVTV;{I|L}{M(Oxidation (M))|F}V[SG]HVS{I|L};{I|L}{M(Oxidation (M))|F}V[SG]HVTV;{I|L}{M(Oxidation (M))|F}K[RN][SG]H;[{M(Oxidation (M))|F}V]{I|L}[SG]HVS{I|L};[{M(Oxidation (M))|F}V]{I|L}[SG]HVTV 4.5727;3.7793;3.291;2.4976;1.8555;0.90983;0.11647 +;-;-;-;-;-;- + 360 + 1 2.122 92822.5 0.5199999809265137 2970 3436 6401 DOHH2_400M_050219_1,6408 DOHH2_400M_050219_1,6408,IFKDHVSL False True IFKDHVSL 35.29979 479.771533191204 700809.4375 6401.0 ENST00000589372.1_1_19:9939013-9939570:+|nuORF;;ENSG00000198258|ENST00000586895|UBL5;;ENST00000588141.1_1_19:9939136-9939570:+|nuORF 3.033584197362264 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6409 35.314 800.0 140750.0 25 0 9509.5 + 5618 DPCIYKFYEFY 11 126 744.3313538770935 0 744.3312866091728 PEAK CID FTMS 0 0 0 6401 85352.8984375 0.0686973676360467 2 -0.2258987426757812 8 Unmodified _DPCIYKFYEFY_ REV__ENSG00000163840|ENST00000296161|DTX3L 8.745405648335112 0.4618489994582195 1 ANQQAE{M(Oxidation (M))|F}GA 9 -1 52.344 0.0 0.0 3.521 0.0 0.0 328.14396120002203 239.07927881412343 567.2232400141455 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 ANQQAE{M(Oxidation (M))|F}GA 3.521 - 2179 + 1 2.122 82268.0 0.5600000023841858 2971 3436 6401 DOHH2_400M_050219_1,6409 DOHH2_400M_050219_1,6409,DPCIYKFYEFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6410 35.327 800.0 222390.0 25 0 23298.0 + 42369 VTDKFTESVY 10 171 594.7929935925865 1187.571434251973 2 594.7953979372978 MULTI CID FTMS 0 0 0 6401 78548.9765625 0.1495703752780084 -1 0.0918426513671875 9 Unmodified _VTDKFTESVY_ ENSG00000254901|ENST00000462790|BORCS8;ENST00000591398.1_1_19:19293380-19297824:-|nuORF;ENST00000602438.1_1_19:19260194-19302926:-|nuORF;nc|ENSG00000254901|Q96FH0-2|BORCS8 84.5221896805406 0.0133617038110099 1 {[TV]|[{I|L}S]}DK{M(Oxidation (M))|F}TESVY 10 0 + 100.99 0.0 0.0 8.5041 8.5041 90.825 0.0 0.0 0.0 11.117646881713767 16.53212513775344 11.117646881713767 7.431278489376041 0 1.3807196863200843 1.3010299956639813 2.603917193908117 0.0 + + {[TV]|[{I|L}S]}DK{M(Oxidation (M))|F}TESVY;{[TV]|[{I|L}S]}DK{M(Oxidation (M))|F}TDTVY;{[TV]|[{I|L}S]}DK{M(Oxidation (M))|F}TSEVY;[VS]EK{M(Oxidation (M))|F}TESVY;[VS]GTV{M(Oxidation (M))|F}TESVY;{[TV]|[{I|L}S]}[SG]V{M(Oxidation (M))|F}TESVY;{[TV]|[{I|L}S]}DK{M(Oxidation (M))|F}SETVY;[VS]GT{M(Oxidation (M))|F}VTESVY;{[TV]|[{I|L}S]}[SG]{M(Oxidation (M))|F}VTESVY;{[TV]|[{I|L}S]}DK{M(Oxidation (M))|F}STEVY 8.5041;7.8784;7.6539;7.568;7.5598;7.5283;7.2264;7.0529;7.0213;7.002 +;-;-;-;-;-;-;-;-;- + 29838 1 2.122 135279.9 0.550000011920929 2972 3436 6401 DOHH2_400M_050219_1,6410 DOHH2_400M_050219_1,6410,VTDKFTESVY True True VTDKFTESVY 35.327469 594.795397937298 7898311.5 6401.0 ENST00000602438.1_1_19:19260194-19302926:-|nuORF;;nc|ENSG00000254901|Q96FH0-2|BORCS8;;ENST00000591398.1_1_19:19293380-19297824:-|nuORF;;ENSG00000254901|ENST00000462790|BORCS8 6.840041160583496 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6411 35.331 197.0 626530.0 25 0 49673.0 + 25831 NLDKNLIKY 9 137 374.2172348295772 1119.6298750889316 3 374.2169677615166 MULTI CID FTMS 0 0 0 6401 301167.28125 0.7418715616952111 -1 0.0918426513671875 10 Unmodified _NLDKNLIKY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 29.081581746732265 0.1611639662936252 1 [KA]{[CA]|SS}PN{I|L}{I|L}KY 10 5 [KA]{[CA]|SS}PN + + 23.549 6.6863 1.1443 2.1033 2.1033 48.983 0.0 0.0 0.0 0.0 9.873095765073764 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 [KA]{[CA]|SS}PN{I|L}{I|L}KY 2.1033 - 157 + 1 2.122 99061.0 1.0 2973 3436 6401 DOHH2_400M_050219_1,6411 DOHH2_400M_050219_1,6411,NLDKNLIKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6412 35.336 247.0 358320.0 25 0 70948.0 38980 TVQAGLPL 8 120 399.73859184063866 797.4626307480773 2 399.7383300662041 MULTI CID FTMS 0 0 0 6401 152933.890625 0.3011459445901768 -7 0.8291587829589844 11 Unmodified _TVQAGLPL_ ENSG00000142185|ENST00000397928|TRPM2 0.7936320650641473 0.8195151834710337 1 H 1 8 9.0908 0.0 0.0 1.14 0.0 0.0 642.3962988162399 0.0 642.3962988162399 0.0 0.1113819735557619 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.14 - 8 + 1 2.122 77359.0 1.0 2974 3436 6401 DOHH2_400M_050219_1,6412 DOHH2_400M_050219_1,6412,TVQAGLPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6413 35.35 722.0 180760.0 25 0 16482.0 37602 TLKPAIAE 8 177 421.7516385099368 841.4887240866735 2 421.7509948611259 MULTI CID FTMS 0 0 0 6401 91193.5703125 0.1775636355626673 -21 2.057411193847656 12 Unmodified _TLKPAIAE_ ENSG00000152455|ENST00000354919|SUV39H2;nc|ENSG00000152455|Q9H5I1-2|SUV39H2 5.230669730166228 0.792582437072536 1 {M(Oxidation (M))|F}NRY 4 8 11.768 0.0 0.0 1.3985 0.0 0.0 243.20155724932903 0.0 243.20155724932903 0.0 -0.6794080817936194 -0.6794080817936194 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}NRY 1.3985 - 35 + 1 2.122 103572.7 1.0 2975 3436 6401 DOHH2_400M_050219_1,6413 DOHH2_400M_050219_1,6413,TLKPAIAE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6415 35.355 50.0 1124700.0 25 0 118880.0 + 31647 RRGDFIHVM 9 69 377.5343452165487 1129.581206249846 3 377.5343200564384 MULTI CID FTMS 0 0 0 6414 825636.3125 0.494973446780742 2 -0.2418975830078125 1 Unmodified _RRGDFIHVM_ ENSG00000177885|ENST00000316804|GRB2;ENST00000462266.1_1_17:73316451-73322393:-|nuORF;nc|ENSG00000177885|P62993-2|GRB2 9.5439744041441 0.5815088571869578 1 {I|L}HVM 4 5 22.193 0.0 0.0 1.9647 0.0 0.0 631.3204903619627 0.0 631.3204903619627 0.0 7.588643834802156 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.0 + {I|L}HVM 1.9647 + + 18 1 2.128 53869.8 1.0 2976 3437 6414 DOHH2_400M_050219_1,6415 DOHH2_400M_050219_1,6415,RRGDFIHVM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6416 35.356 57.0 755490.0 25 0 56224.0 -1 0 57 881.9132660489507 1761.8119791647014 2 882.4142944216728 MULTI CID FTMS 0 0 0 6414 1010642.125 1.0 0 0.0 2 1 EN{I|L}DP{[QN]|[E{I|L}]|[KN]} 7 -1 32.523 0.0 0.0 1.846 0.0 0.0 933.4678692371516 0.0 933.4678692371516 0.0 14.775844697417853 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 EN{I|L}DP{[QN]|[E{I|L}]|[KN]} 1.846 - 63 1 2.128 39381.0 1.0 2977 3437 6414 DOHH2_400M_050219_1,6416 DOHH2_400M_050219_1,6416, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6417 35.358 58.0 1389800.0 25 0 294140.0 28676 PVPPSTAL 8 95 391.2250775758323 780.4356022184646 2 391.2249328494072 MULTI CID FTMS 0 0 0 6414 758309.1875 0.5875533923862666 -6 0.7058525085449219 3 Unmodified _PVPPSTAL_ ENSG00000169194|ENST00000304506|IL13;REV__chr5:78766864-78767842|26|11.38|0.08|7.17|-|2|LHFPL2,LHFPL2|1 2.577480529830294 0.808687252328423 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 8 1 2.128 66978.4 1.0 2978 3437 6414 DOHH2_400M_050219_1,6417 DOHH2_400M_050219_1,6417,PVPPSTAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6418 35.36 94.0 626940.0 25 0 74239.0 + 26322 NRSNTVVIM 9 71 517.2768304685104 1032.5391080038207 2 517.2774536013603 MULTI CID FTMS 0 0 0 6414 383850.71875 1.0 0 0.0 4 Unmodified _NRSNTVVIM_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 20.41453444215458 0.284085796332423 1 TVV{I|L}M 5 4 49.196 0.0 0.0 4.7646 0.0 0.0 471.2185841291032 0.0 471.2185841291032 0.0 36.97743773147742 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 + TVV{I|L}M 4.7646 + + 95 1 2.128 48526.4 1.0 2979 3437 6414 DOHH2_400M_050219_1,6418 DOHH2_400M_050219_1,6418,NRSNTVVIM False True NRSNTVVIM 35.359679 517.27745360136 1160621.5 6414.0 ENST00000379752.5_1_1:157029186-157029948:-|nuORF;;nc|ENSG00000122692|Q2TAY7-2|SMU1;;ENSG00000122692|ENST00000397149|SMU1 4.819492022196452 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6419 35.363 159.0 387330.0 25 0 65167.0 + 10926 GAKRHSGL 8 97 413.2388644783535 824.463176023507 2 413.2385742068291 MULTI CID FTMS 0 0 0 6414 288001.75 0.2166956595671681 -20 2.0589256286621094 5 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 2.302733041254933 0.8103549651115762 1 {I|L} 1 -1 1.5938 0.0 0.0 0.19331 0.0 0.0 411.23946494127887 297.11106287174067 708.3505278130195 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.19331 + + 5 + 1 2.128 53400.4 1.0 2980 3437 6414 DOHH2_400M_050219_1,6419 DOHH2_400M_050219_1,6419,GAKRHSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6420 35.367 223.0 336320.0 25 0 40223.0 + 37219 TIKEKQYIL 9 110 568.3395329587776 1134.664512984355 2 568.3406860232353 MULTI CID FTMS 0 0 0 6414 209384.0 0.7233868249498563 -1 0.0858421325683593 6 Unmodified _TIKEKQYIL_ ENSG00000102897|ENST00000567954|LYRM1 45.69961567697781 0.0497987121815769 1 [{I|L}T][NG]KY{I|L}T{I|L}{I|L} 10 5 + 48.478 0.0 0.0 4.2725 4.2725 72.92 0.0 0.0 0.0 5.950528104279016 1.6009716789200468 1.6009716789200468 1.6009716789200468 0 0.9247425010840048 2.0 0.2742275032520141 0.7614393726401688 [{I|L}T][NG]KY{I|L}T{I|L}{I|L};[{I|L}T][NG]KY{I|L}{I|L}T{I|L};[{I|L}T][NG]YK{I|L}T{I|L}{I|L};[{I|L}T][NG]YK{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{I|L}TWY{I|L}{I|L};[{I|L}T][W{I|L}]Y{I|L}T{I|L}{I|L};[{I|L}T][W{I|L}]Y{I|L}{I|L}T{I|L};[{I|L}T]K[QP][WH]{I|L}{I|L};[{I|L}T]{[TV]|[{I|L}S]}G[KQ]Y{I|L}{I|L};[Y{I|L}]S{[QG]|[NA]}K{I|L}T{I|L}{I|L} 4.2725;4.1314;4.0405;3.8994;3.748;3.5563;3.4152;2.63;2.5222;2.4581 -;-;-;-;-;-;-;-;-;- 989 1 2.128 59754.5 1.0 2981 3437 6414 DOHH2_400M_050219_1,6420 DOHH2_400M_050219_1,6420,TIKEKQYIL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6421 35.371 227.0 458450.0 25 0 34944.0 28560 PTRAVKPQV 9 114 498.3040727370052 994.5935925408104 2 498.3040954470634 MULTI CID FTMS 0 0 0 6414 194923.453125 0.9330387273380004 -1 0.0858421325683593 7 Unmodified _PTRAVKPQV_ ENSG00000091536|ENST00000647165|MYO15A;ENST00000583079.1_1_17:18023566-18025792:+|nuORF 3.944395688203298 0.7769873103969335 1 PNK 3 7 14.425 0.0 0.0 1.4503 0.0 0.0 126.11613392117108 526.2747286432249 652.390862564396 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 PNK 1.4503 - 81 + 1 2.128 83310.2 1.0 2982 3437 6414 DOHH2_400M_050219_1,6421 DOHH2_400M_050219_1,6421,PTRAVKPQV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6422 35.385 800.0 212410.0 25 0 23308.0 + -1 QNNMSIWCQHS 11 133 710.7916268070485 1419.5687006808969 2 710.7924682497978 MULTI CID FTMS 0 0 0 6414 175172.59375 0.7791828170425648 1 -0.1400566101074218 8 Carbamidomethyl (C),Oxidation (M) _QNNM(Oxidation (M))SIWC(Carbamidomethyl (C))QHS_ REV__ENST00000186436.9_1_2:98475819-98543905:-|nuORF 12.240655878213236 0.7805268987462184 1 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 83.708 0.0 0.0 5.8967 0.0 0.0 335.12294954909135 0.0 335.12294954909135 0.0 48.10557025278252 0.0 0.0 0 0.8935078169319297 0.0 1.329689690656103 1.5356668758921828 DEAQQNA{M(Oxidation (M))|F}Y 5.8967 - 2146 1 2.128 123254.8 0.800000011920929 2983 3437 6414 DOHH2_400M_050219_1,6422 DOHH2_400M_050219_1,6422,QNNMSIWCQHS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6423 35.391 314.0 303340.0 25 0 17166.0 + 4899 DGKLKVTL 8 146 437.2749081992666 872.5352634653332 2 437.2748596072197 MULTI CID FTMS 0 0 0 6414 164586.25 0.972691642790742 -2 0.1776847839355468 9 Unmodified _DGKLKVTL_ ENSG00000172009|ENST00000307741|THOP1 55.23464941255904 0.1146254935393113 1 GGD{I|L}KVT{I|L} 8 2 57.327 0.0 0.0 6.5702 0.0 0.0 71.0742436139664 0.0 71.0742436139664 0.0 27.19251659730569 0.0 0.0 0 1.6989700043360187 0.0 1.0941876774005248 0.0 GGD{I|L}KVT{I|L} 6.5702 - 515 1 2.128 78434.3 1.0 2984 3437 6414 DOHH2_400M_050219_1,6423 DOHH2_400M_050219_1,6423,DGKLKVTL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6424 35.401 609.0 302340.0 25 0 30193.0 + 21757 LPMKVRAL 8 173 464.29408961095976 926.5736262887197 2 464.2939941287041 MULTI CID FTMS 0 0 0 6414 139030.0625 1.0 0 0.0 10 Unmodified _LPMKVRAL_ ENSG00000105364|ENST00000253099|MRPL4;nc|ENSG00000105364|Q9BYD3-2|MRPL4 30.22481116460888 0.4082965392918993 1 {I|L}PMK 4 4 49.157 0.0 0.0 5.3052 0.0 0.0 0.0 454.2787116642692 454.2787116642692 26.01707664458017 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + {I|L}PMK 5.3052 + + 225 + 1 2.128 143257.9 1.0 2985 3437 6414 DOHH2_400M_050219_1,6424 DOHH2_400M_050219_1,6424,LPMKVRAL False True LPMKVRAL 35.401473 464.293994128704 800696.875 6414.0 nc|ENSG00000105364|Q9BYD3-2|MRPL4;;ENSG00000105364|ENST00000253099|MRPL4 4.176577726999919 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6425 35.41 489.0 284290.0 25 0 23414.0 + + 7258 EESILSRNY 9 141 555.7779239997466 0 555.7755004763603 PEAK CID FTMS 0 0 0 6414 139777.671875 1.0 0 0.0 11 Unmodified _EESPVLWPGP_ ENST00000521308.5_1_5:150563000-150603580:-|nuORF;ENSG00000198624|ENST00000355417|CCDC69 32.30548876998284 0.1927752022612489 1 ES{I|L}{I|L}SGV 7 -1 43.77 0.0 0.0 3.9449 0.0 0.0 129.0482663571118 292.0931490533813 421.1414154104931 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.7742275032520141 0.0 ES{I|L}{I|L}SGV 3.9449 - 272 + 1 2.128 106294.9 1.0 2986 3437 6414 DOHH2_400M_050219_1,6425 DOHH2_400M_050219_1,6425,EESPVLWPGP False False EESILSRNY 35.410118 555.77550047636 28991022.0 6414.0 ENST00000521308.5_1_5:150563000-150603580:-|nuORF;;ENSG00000198624|ENST00000355417|CCDC69 5.866222381591797 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6426 35.421 610.0 184920.0 25 0 21161.0 + -1 ELELRLCCI 9 120 574.792096756944 1147.569640580688 2 574.7921630740166 MULTI CID FTMS 0 0 0 6414 120443.203125 1.0 0 0.0 12 Carbamidomethyl (C) _ELELRLCC(Carbamidomethyl (C))I_ REV__ENSG00000100503|ENST00000530997|NIN;REV__nc|ENSG00000100503|Q8N4C6-10|NIN;REV__nc|ENSG00000100503|Q8N4C6-11|NIN;REV__nc|ENSG00000100503|Q8N4C6-2|NIN;REV__nc|ENSG00000100503|Q8N4C6-4|NIN;REV__nc|ENSG00000100503|Q8N4C6-5|NIN;REV__nc|ENSG00000100503|Q8N4C6-6|NIN;REV__nc|ENSG00000100503|Q8N4C6-9|NIN;REV__nc|ENSG00000100503|Q8N4C6|NIN 10.823927491677226 0.5436922275383211 1 E[HS] 3 -1 17.447 0.0 0.0 1.5204 0.0 0.0 776.4183691484717 0.0 776.4183691484717 0.0 0.1401436180012218 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 E[HS] 1.5204 - 119 1 2.128 88482.4 1.0 2987 3437 6414 DOHH2_400M_050219_1,6426 DOHH2_400M_050219_1,6426,ELELRLCCI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6427 35.436 800.0 153100.0 25 0 7168.4 + 5241 DKDEIPTISSY 11 195 634.3064267182897 1266.5983005033793 2 634.3065063357353 MULTI CID FTMS 0 0 0 6414 104249.0546875 0.211273022065058 2 -0.2418975830078125 13 Unmodified _DKDEIPTISSY_ ENSG00000227729|ENST00000557640|RD3L 16.565877749689598 0.6905575015977202 1 [EP]SQGSE{M(Oxidation (M))|F} 8 9 41.952 0.0 0.0 3.3122 0.0 0.0 0.0 402.22980620089805 402.22980620089805 11.567270949552082 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.9406140654642807 0.0 [EP]SQGSE{M(Oxidation (M))|F} 3.3122 - 2673 1 2.128 97360.4 0.6399999856948853 2988 3437 6414 DOHH2_400M_050219_1,6427 DOHH2_400M_050219_1,6427,DKDEIPTISSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6428 35.446 608.0 168610.0 25 0 7660.3 -1 ISQMTNLQ 8 144 475.73242242756254 949.4502919219252 2 475.7327758669853 MULTI CID FTMS 0 0 0 6414 103897.5234375 1.0 0 0.0 14 Oxidation (M) _ISQM(Oxidation (M))TNLQ_ ENSG00000171492|ENST00000337338|LRRC8D 23.1484247019978 0.5573009939494978 1 QQEAQVT{M(Oxidation (M))|F} 8 -1 QQEAQV + + 23.029 17.858 2.6134 2.4255 2.4255 49.353 0.0 0.0 0.0 0.0 -1.8185620858729048 -1.8185620858729048 0.0 0 0.0 0.0 0.2059771852360797 0.0 QQEAQVT{M(Oxidation (M))|F} 2.4255 - 399 + 1 2.128 82132.5 1.0 2989 3437 6414 DOHH2_400M_050219_1,6428 DOHH2_400M_050219_1,6428,ISQMTNLQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6429 35.46 800.0 70467.0 25 0 3345.8 + -1 YRCRELYNWFQ 11 91 817.8834165413904 1633.7522801495809 2 817.8853637576103 MULTI CID FTMS 0 0 0 6414 94485.9453125 1.0 0 0.0 15 Carbamidomethyl (C) _YRC(Carbamidomethyl (C))RELYNWFQ_ REV__ENSG00000243509|ENST00000369996|TNFRSF6B 2.735195868890462 0.8622431031272658 1 QDAN{I|L}N[EP] 8 -1 56.547 0.0 0.0 3.4612 0.0 0.0 734.3705921857437 0.0 734.3705921857437 0.0 26.771081482726373 0.0 0.0 0 1.8807196863200843 0.0 0.0 0.3494850021680094 QDAN{I|L}N[EP] 3.4612 - 586 1 2.128 47500.6 0.5699999928474426 2990 3437 6414 DOHH2_400M_050219_1,6429 DOHH2_400M_050219_1,6429,YRCRELYNWFQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6430 35.465 174.0 498530.0 25 0 28936.0 + 340 AEAPGDPQW 9 109 485.7169232433642 969.4192935535284 2 485.7165710330009 MULTI CID FTMS 0 0 0 6414 178795.0625 0.5844092554858061 -1 0.0858421325683593 16 Unmodified _AEAPGDPQW_ ENSG00000175463|ENST00000542590|TBC1D10C;ENST00000529132.1_1_11:67172517-67173239:+|nuORF;ENST00000530967.6_1_11:67171601-67174164:+|nuORF;nc|ENSG00000175463|Q8IV04-2|TBC1D10C 60.07390631473393 0.0260411565414776 1 [QP]AEDPQW 8 4 + 31.679 0.0 0.0 3.2678 3.2678 69.054 0.0 0.0 0.0 1.9418112417701217 4.388793896675256 1.9418112417701217 0.9691001300805624 0 0.718765315847925 1.0 0.2887254899964357 0.0 [QP]AEDPQW;[QP]D{[CP]|[EA]}PQW;{[CP]|[EA]}A[PG]DPQW;[PA]GAEDPQW;[PA]QEDPQW;[QP]D[PG]A{[CP]|[EA]}W;[PA]GD{[CP]|[EA]}PQW;[PG]DA{[CP]|[EA]}PQW;[QP]D[QP]{[CP]|[EA]}W;{[CP]|[EA]}[QP]DPQW 3.2678;3.1679;2.7741;2.3793;2.3321;2.3047;2.2793;2.2765;2.1286;2.0823 -;-;+;-;-;-;-;-;-;- + 524 1 2.128 70305.4 1.0 2991 3437 6414 DOHH2_400M_050219_1,6430 DOHH2_400M_050219_1,6430,AEAPGDPQW True True AEAPGDPQW 35.464824 485.716571033001 4118920.5 6414.0 ENST00000530967.6_1_11:67171601-67174164:+|nuORF;;nc|ENSG00000175463|Q8IV04-2|TBC1D10C;;ENST00000529132.1_1_11:67172517-67173239:+|nuORF;;ENSG00000175463|ENST00000542590|TBC1D10C;;chr11:67405184-67405595|27|31.59|0.58|5.78|+|0|TBC1D10C,TBC1D10C|1 7.247451305389404 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6431 35.469 201.0 545090.0 25 0 123830.0 463 AEFRAPQVMTY 11 64 656.8236695540903 1311.6327861749803 2 656.8241454958916 MULTI CID FTMS 0 0 0 6414 169580.53125 0.2481949465088364 -2 0.1776847839355468 17 Unmodified _AEFRAPQVMTY_ ENSG00000103021|ENST00000219299|CCDC113;nc|ENSG00000103021|Q9H0I3-2|CFAP263 7.608950283845883 0.8392484121837455 1 Y 1 10 14.604 0.0 0.0 1.1134 0.0 0.0 1130.5583670849398 0.0 1130.5583670849398 0.0 0.7918124604762493 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1134 + + 22 + 1 2.128 83226.9 1.0 2992 3437 6414 DOHH2_400M_050219_1,6431 DOHH2_400M_050219_1,6431,AEFRAPQVMTY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6432 35.477 482.0 312220.0 25 0 11965.0 + + 763 SEVDVSDLGSRNY 13 153 721.3818416091723 0 721.3807250857353 PEAK CID FTMS 0 0 0 6414 103386.9765625 0.313594069360527 -1 0.0858421325683593 18 Unmodified _AERFFWFINVL_ ENST00000527295.5_1_11:405898-406649:-|nuORF;ENSG00000185187|ENST00000431843|SIGIRR 31.26834338654808 0.2152680502973705 1 VNASQSPDD 9 -1 82.168 0.0 0.0 5.7032 0.0 0.0 131.09667026628682 393.25107752017817 524.347747786465 0.0 0.0 0.0 0.0 0 0.6307196863200843 0.0 2.1989700043360187 0.7742275032520141 VNASQSPDD 5.7032 - 3983 + 1 2.128 108022.4 1.0 2993 3437 6414 DOHH2_400M_050219_1,6432 DOHH2_400M_050219_1,6432,AERFFWFINVL False False SEVDVSDLGSRNY 35.477208 721.380725085735 451413.4375 6414.0 ENST00000527295.5_1_11:405898-406649:-|nuORF;;ENSG00000185187|ENST00000431843|SIGIRR 3.0377010107040405 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6433 35.49 712.0 74532.0 25 0 10780.0 19825 LHDCPDSL 8 103 450.1985062665196 0 449.8663818240166 PEAK CID FTMS 0 0 0 6414 38604.78125 0.2747526737083336 1 -0.1400566101074218 19 Unmodified _LHDCPDSL_ ENST00000506603.5_1_5:79058805-79095436:+|nuORF 6.354104778181461 0.5763711549229614 1 Y 1 8 1.5938 0.0 0.0 0.17741 0.0 0.0 485.1795615058923 247.11960779361564 732.299169299508 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.17741 - 1 + 1 2.128 45034.3 1.0 2994 3437 6414 DOHH2_400M_050219_1,6433 DOHH2_400M_050219_1,6433,LHDCPDSL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6435 35.494 42.0 729890.0 25 0 50753.0 -1 SNEPDRSCNP 10 68 588.2385436899773 1174.4625344467545 2 588.2395507693291 MULTI CID FTMS 0 0 0 6434 719078.8125 0.1637578495234861 2 -0.2264137268066406 1 Carbamidomethyl (C) _SNEPDRSC(Carbamidomethyl (C))NP_ ENSG00000132824|ENST00000342374|SERINC3;nc|ENSG00000132824|Q13530-2|SERINC3 19.256988751693697 0.5244284437930726 1 [NS]E{I|L} 4 -1 39.073 0.0 0.0 3.3269 0.0 0.0 0.0 728.2415926345076 728.2415926345076 12.531099442362652 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.1022338482433751 0.6139829889124311 [NS]E{I|L} 3.3269 - 70 1 2.128 27617.9 1.0 2995 3438 6434 DOHH2_400M_050219_1,6435 DOHH2_400M_050219_1,6435,SNEPDRSCNP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6436 35.501 368.0 122100.0 25 0 13974.0 + 908 AEYNSDLHQF 10 76 612.2696886333393 1222.5248243334786 2 612.2704955935478 MULTI CID FTMS 0 0 0 6434 126218.5859375 0.0868107861564062 2 -0.2264137268066406 2 Unmodified _AEYNSDLHQF_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 33.4449034751529 0.2267874087365337 1 {[CP]|[EA]}YNSD{I|L}HQ{M(Oxidation (M))|F} 10 0 + 50.495 0.0 0.0 4.1304 4.1304 80.465 0.0 0.0 0.0 32.96523491790217 11.778259348524358 11.778259348524358 9.164539485499256 0 0.4247425010840047 0.0 0.0 0.6861818737241735 + + {[CP]|[EA]}YNSD{I|L}HQ{M(Oxidation (M))|F};{[CP]|[EA]}YGGSD{I|L}HQ{M(Oxidation (M))|F};{[CP]|[EA]}YNSD{I|L}H[AG]{M(Oxidation (M))|F};{[CP]|[EA]}YNS[YK]WY;{[CP]|[EA]}YGGS[YK]WY;{[CP]|[EA]}YGGSD{I|L}H[AG]{M(Oxidation (M))|F};{[CP]|[EA]}YNS[YK]{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F};{[CP]|[EA]}YN[WP][KG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4.1304;3.3807;3.1309;2.8766;2.1234;2.0727;1.8772;1.6539 +;-;-;-;-;-;-;- + 203 + 1 2.128 38249.7 1.0 2996 3438 6434 DOHH2_400M_050219_1,6436 DOHH2_400M_050219_1,6436,AEYNSDLHQF False True AEYNSDLHQF 35.500982 612.270495593548 16112459.0 6434.0 ENST00000465029.5_1_2:111419157-111435602:-|nuORF;;nc|ENSG00000169679|O43683-2|BUB1;;ENSG00000169679|ENST00000302759|BUB1;;nc|ENSG00000169679|O43683-3|BUB1 8.414442380269369 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6437 35.503 109.0 1216800.0 25 0 110770.0 + + 20136 DEGDLRNGW 9 110 531.3576357182029 1060.7007185032055 2 531.3580200076103 MULTI CID FTMS 0 0 0 6434 478893.59375 0.1111333335305866 -2 0.2258987426757812 3 Unmodified _LKPGILPVPK_ ENSG00000175895|ENST00000315367|PLEKHF2 18.721224879955976 0.5334180411911432 1 K{I|L}AP{I|L}VKD{I|L} 9 -1 72.336 0.0 0.0 6.8196 0.0 0.0 0.0 80.05124078922108 80.05124078922108 51.70634231645232 0.0 0.0 0.0 0 1.75 0.0 1.1549471895720984 0.0 K{I|L}AP{I|L}VKD{I|L} 6.8196 - 284 + 1 2.128 105742.6 1.0 2997 3438 6434 DOHH2_400M_050219_1,6437 DOHH2_400M_050219_1,6437,LKPGILPVPK False False DEGDLRNGW 35.503295 531.35802000761 2990790.25 6434.0 ENSG00000175895|ENST00000315367|PLEKHF2 1.9415020942687988 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6438 35.506 113.0 621800.0 25 0 102340.0 + 22724 LQIDNARLA 9 83 507.2905887897484 1012.5666246462968 2 507.2904846072197 MULTI CID FTMS 0 0 0 6434 435023.9375 0.9750292089929448 -1 0.1400566101074218 4 Unmodified _LQIDNARLA_ CON__P02533;CON__P02535-1;CON__P05784;CON__P08727;CON__P08779;CON__P13645;CON__P19001;CON__Q04695;CON__Q148H6;CON__Q3ZAW8;CON__Q6IFX2;CON__Q7Z3Y7;CON__Q99456;CON__Q9QWL7;CON__Q9Z2K1;ENSG00000111057|ENST00000388835|KRT18;ENSG00000128422|ENST00000311208|KRT17;ENSG00000171345|ENST00000361566|KRT19;ENSG00000173908|ENST00000306658|KRT28;ENSG00000186395|ENST00000269576|KRT10;ENSG00000186832|ENST00000301653|KRT16;ENSG00000186847|ENST00000167586|KRT14;ENSG00000187242|ENST00000251643|KRT12;ENST00000414673.5_1_17:16734454-16736059:-|nuORF;ENST00000417510.5_1_17:16723399-16724042:-|nuORF;ENST00000425692.6_1_17:16723399-16724021:-|nuORF;ENST00000491673.1_1_17:39779200-39780782:-|nuORF;ENST00000493253.5_1_17:39778327-39780527:-|nuORF;ENST00000520711.1_1_8:41368829-41369321:+|nuORF;ENST00000527480.1_1_11:6015523-6015940:-|nuORF;ENST00000534728.1_1_11:124983810-124984254:+|nuORF;ENST00000549078.5_1_12:53342924-53344195:+|nuORF;ENST00000581937.1_1_18:9678609-9679128:-|nuORF 39.94969957227396 0.0757326808254658 1 {I|L}Q{I|L}DNA 6 3 65.138 0.0 0.0 6.433 0.0 0.0 0.0 355.2091463678344 355.2091463678344 58.10402823752675 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.5 0.4247425010840047 + {I|L}Q{I|L}DNA 6.433 + + 39 + 1 2.128 59953.1 1.0 2998 3438 6434 DOHH2_400M_050219_1,6438 DOHH2_400M_050219_1,6438,LQIDNARLA True True LQIDNARLA 35.505664 507.29048460722 2669702.25 6434.0 Q99456;;P02533;;P05784;;ENST00000549078.5_1_12:53342924-53344195:+|nuORF;;ENSG00000111057|ENST00000388835|KRT18;;ENSG00000186832|ENST00000301653|KRT16;;P13645;;ENST00000581937.1_1_18:9678609-9679128:-|nuORF;;P02535-1;;ENST00000414673.5_1_17:16734454-16736059:-|nuORF;;ENSG00000187242|ENST00000251643|KRT12;;ENST00000493253.5_1_17:39778327-39780527:-|nuORF;;ENST00000417510.5_1_17:16723399-16724042:-|nuORF;;ENSG00000186847|ENST00000167586|KRT14;;ENST00000425692.6_1_17:16723399-16724021:-|nuORF;;ENST00000520711.1_1_8:41368829-41369321:+|nuORF;;ENSG00000171345|ENST00000361566|KRT19;;P19001;;Q6IFX2;;ENSG00000173908|ENST00000306658|KRT28;;ENSG00000186395|ENST00000269576|KRT10;;Q04695;;P08779;;Q3ZAW8;;Q9QWL7;;P08727;;ENST00000527480.1_1_11:6015523-6015940:-|nuORF;;ENST00000534728.1_1_11:124983810-124984254:+|nuORF;;ENST00000491673.1_1_17:39779200-39780782:-|nuORF;;Q9Z2K1;;Q7Z3Y7;;Q148H6;;ENSG00000128422|ENST00000311208|KRT17 4.530908743540446 2.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 6439 35.512 348.0 270510.0 25 0 15903.0 + 7725 ELDPMAMTQKY 11 113 671.8046318398307 1341.5947107464613 2 671.8049804568291 MULTI CID FTMS 0 0 0 6434 279326.78125 1.0 0 0.0 5 Oxidation (M) _ELDPM(Oxidation (M))AMTQKY_ ENST00000534765.1_1_11:65835264-65836005:+|nuORF;ENSG00000087365|ENST00000322535|SF3B2 46.0223103267499 0.1396584557920269 1 {[QN]|[E{I|L}]|[KN]}DPMSMTQKY 11 1 + 81.548 0.0 0.0 6.0784 6.0784 81.412 0.0 0.0 0.0 51.378493940035455 13.080923170097847 13.080923170097847 3.0102999566398125 0 0.3054621874040891 2.0 0.3494850021680094 0.6307196863200843 {[QN]|[E{I|L}]|[KN]}DPMSMTQKY;{[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}AMTQKY;{[QN]|[E{I|L}]|[KN]}DPMA{M(Oxidation (M))|F}TQKY;{[QN]|[E{I|L}]|[KN]}DPMSMT[AG]KY;{[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}AMT[AG]KY;{[QN]|[E{I|L}]|[KN]}DPMA{M(Oxidation (M))|F}T[AG]KY;{[QN]|[E{I|L}]|[KN]}D[WE]MTQKY;{[QN]|[E{I|L}]|[KN]}DPMSW{[CA]|SS}KY;{[QN]|[E{I|L}]|[KN]}M[DP]SMTQKY;{[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}AW{[CA]|SS}KY 6.0784;5.8541;5.7228;5.398;5.1736;5.0424;4.6394;4.5315;4.5134;4.3071 -;+;+;-;-;-;-;-;-;- + 2847 + 1 2.128 74420.7 1.0 2999 3438 6434 DOHH2_400M_050219_1,6439 DOHH2_400M_050219_1,6439,ELDPMAMTQKY False False ELDPMAMTQKY 35.511964 671.804980456829 1882484.5 6434.0 ENST00000534765.1_1_11:65835264-65836005:+|nuORF;;ENSG00000087365|ENST00000322535|SF3B2 6.578518549601237 2.0 True 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6440 35.513 56.0 910340.0 25 0 61338.0 -1 ESISVIRQM 9 82 560.7888341814564 1119.5631154297128 2 561.2933837771416 MULTI CID FTMS 0 0 0 6434 253189.78125 0.7406483475929557 -1 0.1400566101074218 6 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))ESISVIRQM(Oxidation (M))_ ENST00000331314.10_1_1:200635381-200635528:-|nuORF 10.823927491677226 0.5436922275383211 1 E{I|L}AET[CS] 7 -1 25.706 0.0 0.0 2.296 0.0 0.0 368.251756736525 0.0 368.251756736525 0.0 4.992369838338462 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}AET[CS] 2.296 - 98 1 2.128 45252.9 1.0 3000 3438 6434 DOHH2_400M_050219_1,6440 DOHH2_400M_050219_1,6440,ESISVIRQM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6441 35.516 141.0 332010.0 25 0 42858.0 + -1 VTWLCFCC 8 72 544.7224904864846 1087.4304280397691 2 544.7231933474541 MULTI CID FTMS 0 0 0 6434 249967.15625 1.0 0 0.0 7 2 Carbamidomethyl (C) _VTWLC(Carbamidomethyl (C))FC(Carbamidomethyl (C))C_ REV__ENST00000397030.5_1_13:113751205-113751547:+|nuORF 5.230669730166228 0.792582437072536 1 YEAY 4 -1 25.918 0.0 0.0 2.3834 0.0 0.0 543.2088837055879 0.0 543.2088837055879 0.0 13.945202964068848 0.0 0.0 0 0.0 0.0 0.0 0.0 YEAY 2.3834 - 56 + 1 2.128 43105.6 1.0 3001 3438 6434 DOHH2_400M_050219_1,6441 DOHH2_400M_050219_1,6441,VTWLCFCC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6442 35.53 800.0 247810.0 25 0 20745.0 + -1 YETFTDFCIYY 11 132 761.3158669333542 1520.6171809335085 2 761.3166992068291 MULTI CID FTMS 0 0 0 6434 203140.765625 1.0 0 0.0 8 Carbamidomethyl (C) _YETFTDFC(Carbamidomethyl (C))IYY_ REV__ENSG00000081913|ENST00000262719|PHLPP1;REV__ENST00000588953.1_1_18:60506025-60506217:+|nuORF;REV__nc|ENSG00000081913|O60346-2|PHLPP1 8.745405648335112 0.8338865417133445 1 {[QN]|[E{I|L}]|[KN]}AGAAEDHNNA{M(Oxidation (M))|F}Y 14 -1 + 90.431 0.0 0.0 5.947 5.947 83.372 0.0 0.0 0.0 5.6013769813670535 11.504697682456351 5.6013769813670535 5.090055856115015 0 1.3935078169319297 0.6989700043360187 1.069341519366547 2.666386562212267 {[QN]|[E{I|L}]|[KN]}AGAAEDHNNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQAEDHNNA{M(Oxidation (M))|F}Y;[HD][PS]DEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGAAEDHNNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}QAAEDHNNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGAAEDHGGNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGAAEDHNGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQAEDHNNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGAAEDH{I|L}DA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQAAEDHNNA{M(Oxidation (M))|F}Y 5.947;5.6123;5.5787;5.4656;5.3542;5.3518;5.3518;5.287;5.2718;5.0227 -;-;-;-;-;-;-;-;-;- 13713 1 2.128 142657.5 0.8199999928474426 3002 3438 6434 DOHH2_400M_050219_1,6442 DOHH2_400M_050219_1,6442,YETFTDFCIYY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6443 35.535 253.0 256540.0 25 0 17293.0 + 22533 MGRDPGVSF 9 100 483.22896260356 964.44337227392 2 483.2289306521416 MULTI CID FTMS 0 0 0 6434 148162.4375 1.0 0 0.0 9 Unmodified _LPWGQMSF_ nc|ENSG00000122952|O95229-2|ZWINT;ENSG00000122952|ENST00000373944|ZWINT 23.1484247019978 0.5573009939494978 1 {[TV]|[{I|L}S]}H[{M(Oxidation (M))|F}E]VS{M(Oxidation (M))|F} 8 5 + 37.056 0.0 0.0 3.8422 3.8422 75.642 0.0 0.0 0.0 3.031792101085067 26.08641397512596 3.031792101085067 4.771212547196626 0 1.0 0.721246399047171 0.0 0.0 {[TV]|[{I|L}S]}H[{M(Oxidation (M))|F}E]VS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[SG]D[PG]VS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[SG]D[KP]D{M(Oxidation (M))|F} 3.8422;3.3475;3.1174;2.2338 -;-;-;- 159 1 2.128 53680.4 1.0 3003 3438 6434 DOHH2_400M_050219_1,6443 DOHH2_400M_050219_1,6443,LPWGQMSF False False MGRDPGVSF 35.534797 483.228930652142 630334.375 6434.0 nc|ENSG00000122952|O95229-2|ZWINT;;ENSG00000122952|ENST00000373944|ZWINT 4.989580869674683 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6444 35.549 800.0 146810.0 25 0 8510.2 + -1 EEMPESGAGSEF 12 153 635.2503658428752 1268.4861787525504 2 635.2516357302666 MULTI CID FTMS 0 0 0 6434 131272.734375 1.0 0 0.0 10 Carbamidomethyl (C) _EEMKVMC(Carbamidomethyl (C))DNN_ ENSG00000125651|ENST00000394456|GTF2F1 19.256988751693697 0.5244284437930726 1 [EP]SGAGSE{M(Oxidation (M))|F} 9 -1 62.568 0.0 0.0 4.9325 0.0 0.0 0.0 404.1141444110066 404.1141444110066 23.17143775406548 0.0 0.0 0.0 0 0.0 1.0457574905606752 2.5813995467886794 0.0 [EP]SGAGSE{M(Oxidation (M))|F} 4.9325 - 3315 1 2.128 90455.9 0.6800000071525574 3004 3438 6434 DOHH2_400M_050219_1,6444 DOHH2_400M_050219_1,6444,EEMKVMCDNN False False EEMPESGAGSEF 35.548634 635.251635730267 1141899.125 6434.0 ENSG00000125651|ENST00000394456|GTF2F1 7.031154950459798 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6445 35.558 507.0 308690.0 25 0 16201.0 + 11278 GEVDPKVAL 9 181 464.2614524697549 926.50835200631 2 464.2624694705009 MULTI CID FTMS 0 0 0 6434 124951.328125 0.7751607849272534 -1 0.1400566101074218 11 Unmodified _GEVDPKVAL_ ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF 25.399314129420983 0.2080152500878129 1 {[DA]|[EG]}V 3 6 25.708 0.0 0.0 2.7748 0.0 0.0 0.0 638.352595740938 638.352595740938 2.4865124202832334 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}V 2.7748 + + 442 1 2.128 119773.0 1.0 3005 3438 6434 DOHH2_400M_050219_1,6445 DOHH2_400M_050219_1,6445,GEVDPKVAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6446 35.568 541.0 338200.0 25 0 42969.0 + 28323 PRVKGPPG 8 192 404.245553628372 806.476554323544 2 404.2455016970634 MULTI CID FTMS 0 0 0 6434 95744.5703125 0.4041474221873161 -1 0.1400566101074218 12 Unmodified _PRVKGPPG_ REV__ENST00000496645.5_1_1:159898526-159898643:-|nuORF 5.760428011301431 0.7893668129297577 1 {I|L}{I|L}{I|L}HR 5 -1 50.258 0.0 0.0 6.2319 0.0 0.0 156.052446660959 0.0 156.052446660959 0.0 40.34358442555106 0.0 0.0 0 1.1109243748081783 0.0 0.0 0.7210973720814251 {I|L}{I|L}{I|L}HR 6.2319 - 88 + 1 2.128 143647.0 1.0 3006 3438 6434 DOHH2_400M_050219_1,6446 DOHH2_400M_050219_1,6446,PRVKGPPG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6447 35.57 83.0 1265200.0 25 0 377390.0 -1 0 85 522.2927065955804 521.2854301289804 1 522.2924072146416 MULTI CID FTMS 0 0 0 6434 875189.0625 1.0 0 0.0 13 1 [YQ]V{I|L} 4 -1 + 56.287 0.0 0.0 10.798 10.798 85.595 0.0 0.0 0.0 1.6452935963211246 1.6452935963211246 1.6452935963211246 1.6452935963211246 0 0.805462187404089 1.3979400086720375 0.0 0.805462187404089 [YQ]V{I|L};YQV{I|L};Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Y 10.798;10.482;5.2653;4.568;2.192 -;-;-;-;- 46 1 2.128 83758.9 1.0 3007 3438 6434 DOHH2_400M_050219_1,6447 DOHH2_400M_050219_1,6447, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6448 35.572 102.0 593950.0 25 0 58696.0 + 218 AATEDNQVW 9 100 517.2327409246177 1032.4509289160353 2 517.2332031130791 MULTI CID FTMS 0 0 0 6434 214528.578125 0.6580756133983371 -1 0.1400566101074218 14 Unmodified _AATEDNQVW_ chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161681590-161683167:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-11|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-14|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-4|FCRLA;nc|ENSG00000132185|Q7L513-5|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 12.531546534597751 0.4974689918368763 1 VW 2 7 19.38 0.0 0.0 1.8771 0.0 0.0 729.2932273552916 0.0 729.2932273552916 0.0 1.6896155137222024 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + VW 1.8771 + + 225 + 1 2.128 51167.3 1.0 3008 3438 6434 DOHH2_400M_050219_1,6448 DOHH2_400M_050219_1,6448,AATEDNQVW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6449 35.586 800.0 128410.0 25 0 6518.0 -1 0 90 910.9159092239933 1819.8172655147864 2 911.4198486208916 MULTI CID FTMS 0 0 0 6434 141046.15625 0.3050421593594048 7 -0.7957839965820312 15 1 EN{I|L}DP{[QN]|[E{I|L}]|[KN]} 7 -1 32.733 0.0 0.0 1.7987 0.0 0.0 991.4702625959 0.0 991.4702625959 0.0 13.027194418743804 0.0 0.0 0 0.3935078169319297 0.0 0.75 0.3807196863200844 EN{I|L}DP{[QN]|[E{I|L}]|[KN]} 1.7987 - 103 1 2.128 72245.2 0.4900000095367431 3009 3438 6434 DOHH2_400M_050219_1,6449 DOHH2_400M_050219_1,6449, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6450 35.592 292.0 263050.0 25 0 18034.0 + 29889 QRVVKRFSM 9 136 384.222427579337 0 384.2235595583916 PEAK CID FTMS 0 0 0 6434 141013.40625 0.7584722472949218 1 -0.1018409729003906 16 Unmodified _QRVVKRFSM_ REV__ENSG00000172725|ENST00000341356|CORO1B;REV__ENST00000453768.6_1_11:67208484-67210099:-|nuORF 2.735195868890462 0.3444685223463735 1 {M(Oxidation (M))|F} 1 -1 2.4743 0.0 0.0 0.32283 0.0 0.0 447.2870354791834 169.05092798404533 616.3379634632288 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.32283 + + 2 + 1 2.128 64066.4 1.0 3010 3438 6434 DOHH2_400M_050219_1,6450 DOHH2_400M_050219_1,6450,QRVVKRFSM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6452 35.596 14.0 3912600.0 25 0 487210.0 + 5737 DPMKARVVL 9 73 514.799600907026 1027.584648880852 2 514.8002197146416 MULTI CID FTMS 0 0 0 6451 3385759.0 0.469578873160714 1 -0.12457275390625 1 Unmodified _DPMKARVVL_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 46.020951573049366 0.0490941689151868 1 DPMKA 5 4 61.37 0.0 0.0 5.9723 0.0 0.0 0.0 482.3107699029906 482.3107699029906 46.67735320183944 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + DPMKA 5.9723 + + 63 + 1 2.127 46134.5 1.0 3011 3439 6451 DOHH2_400M_050219_1,6452 DOHH2_400M_050219_1,6452,DPMKARVVL True True DPMKARVVL 35.59619 514.800219714642 78690872.0 6451.0 ENSG00000143742|ENST00000304786|SRP9;;nc|ENSG00000143742|P49458-2|SRP9 8.25166908899943 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6453 35.598 75.0 807350.0 25 0 63971.0 43501 WWWWIWWQWW 10 52 874.9042007258124 1747.7938485184247 2 874.9053832888603 MULTI CID FTMS 0 0 0 6451 798062.125 0.293741105407489 5 -0.5738792419433594 2 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 1 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 8 49.359 0.0 0.0 2.824 0.0 0.0 734.3694935529312 0.0 734.3694935529312 0.0 29.665762445130497 0.0 0.0 0 1.5 0.0 0.0 0.8494850021680094 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.824 - 111 1 2.127 46168.2 1.0 3012 3439 6451 DOHH2_400M_050219_1,6453 DOHH2_400M_050219_1,6453,WWWWIWWQWW False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 6454 35.599 18.0 4129600.0 25 0 342820.0 + 6329 DVKGRIYQL 9 80 546.3139078195369 1090.6132627058737 2 546.3143798708916 MULTI CID FTMS 0 0 0 6451 3235263.75 0.3038132117077718 -1 0.1018409729003906 3 Unmodified _DVKGRIYQL_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000536090.1_1_12:6626539-6627126:+|nuORF;ENST00000542472.1_1_12:6626979-6631036:+|nuORF 53.832793166522166 0.0319663582346103 1 DVK 3 6 53.94 0.0 0.0 4.9459 0.0 0.0 0.0 745.4011903493275 745.4011903493275 22.39786858548108 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.4247425010840047 + DVK 4.9459 + + 56 + 1 2.127 61444.2 1.0 3013 3439 6451 DOHH2_400M_050219_1,6454 DOHH2_400M_050219_1,6454,DVKGRIYQL True True DVKGRIYQL 35.599126 546.314379870892 58718327.0 6451.0 ENST00000542472.1_1_12:6626979-6631036:+|nuORF;;ENST00000536090.1_1_12:6626539-6627126:+|nuORF;;ENSG00000010292|ENST00000315579|NCAPD2 3.0609544863303504 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6455 35.601 104.0 599960.0 25 0 55546.0 + 11805 GLMKKAYEL 9 93 526.7940746118552 1051.5735962905103 2 526.7943603396416 MULTI CID FTMS 0 0 0 6451 396624.71875 1.0 0 0.0 4 Unmodified _GLMKKAYEL_ chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;ENSG00000068305|ENST00000557942|MEF2A;ENSG00000081189|ENST00000504921|MEF2C;ENSG00000116604|ENST00000348159|MEF2D;ENSG00000213999|ENST00000424583|MEF2B;ENST00000558983.5_1_15:100173318-100211695:+|nuORF;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078|MEF2A;nc|ENSG00000081189|Q06413-2|MEF2C;nc|ENSG00000081189|Q06413-3|MEF2C;nc|ENSG00000081189|Q06413-4|MEF2C;nc|ENSG00000081189|Q06413-5|MEF2C;nc|ENSG00000081189|Q06413-6|MEF2C;nc|ENSG00000116604|Q14814-2|MEF2D;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D;nc|ENSG00000116604|Q14814-6|MEF2D;nc|ENSG00000213999|Q02080|MEF2B 29.081581746732265 0.1611639662936252 1 {I|L}GMKP 5 7 57.691 0.0 0.0 5.4861 0.0 0.0 0.0 522.2499483697874 522.2499483697874 41.49288766643714 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}GMKP 5.4861 - 224 + 1 2.127 54851.4 1.0 3014 3439 6451 DOHH2_400M_050219_1,6455 DOHH2_400M_050219_1,6455,GLMKKAYEL False True GLMKKAYEL 35.601421 526.794360339642 1376450.0 6451.0 ENST00000558983.5_1_15:100173318-100211695:+|nuORF;;nc|ENSG00000116604|Q14814-4|MEF2D;;ENSG00000116604|ENST00000348159|MEF2D;;nc|ENSG00000068305|Q02078|MEF2A;;nc|ENSG00000068305|Q02078-6|MEF2A;;chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;;nc|ENSG00000081189|Q06413-2|MEF2C;;nc|ENSG00000081189|Q06413-3|MEF2C;;nc|ENSG00000068305|Q02078-4|MEF2A;;ENSG00000213999|ENST00000424583|MEF2B;;ENSG00000068305|ENST00000557942|MEF2A;;nc|ENSG00000068305|Q02078-5|MEF2A;;nc|ENSG00000081189|Q06413-5|MEF2C;;nc|ENSG00000213999|Q02080|MEF2B;;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;;nc|ENSG00000068305|Q02078-3|MEF2A;;nc|ENSG00000116604|Q14814-6|MEF2D;;nc|ENSG00000116604|Q14814-2|MEF2D;;ENSG00000081189|ENST00000504921|MEF2C;;nc|ENSG00000081189|Q06413-6|MEF2C;;nc|ENSG00000081189|Q06413-4|MEF2C;;nc|ENSG00000116604|Q14814-3|MEF2D;;nc|ENSG00000116604|Q14814-5|MEF2D 5.526431401570638 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6456 35.604 146.0 593830.0 25 0 95501.0 + 18434 KYAKEMGLI 9 100 351.53169337701354 1051.5732507312407 3 351.5316650271416 MULTI CID FTMS 0 0 0 6451 395122.03125 1.0 0 0.0 5 Unmodified _KYAKEMGLI_ REV__ENSG00000080200|ENST00000389622|CRYBG3 10.073929032068715 0.563993802247229 1 {[VA]|[{I|L}G]}[YV]HY 6 -1 23.121 0.0 0.0 2.1987 0.0 0.0 0.0 316.18911092256934 316.18911092256934 2.5404627391502927 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[VA]|[{I|L}G]}[YV]HY 2.1987 - 111 1 2.127 75207.8 1.0 3015 3439 6451 DOHH2_400M_050219_1,6456 DOHH2_400M_050219_1,6456,KYAKEMGLI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6457 35.607 153.0 439830.0 25 0 48927.0 + 29636 QMSERNIL 8 109 495.7553852765483 989.4962176198966 2 495.7557250857353 MULTI CID FTMS 0 0 0 6451 350097.0625 1.0 0 0.0 6 Unmodified _QMSERNIL_ ENSG00000111642|ENST00000544040|CHD4;ENST00000535717.1_1_12:6679844-6680280:-|nuORF;nc|ENSG00000111642|Q14839-2|CHD4 37.97399986684836 0.2681860861828418 1 QMSE[RN]{I|L}{I|L} 8 0 + 44.052 0.0 0.0 4.452 4.452 84.253 0.0 0.0 0.0 25.825637824532137 9.640012553530966 9.640012553530966 12.21848749616356 0 0.4247425010840047 1.3010299956639813 0.0 0.3252574989159953 + + QMSE[RN]{I|L}{I|L};QMS{[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}{I|L};QMS{[QV]|[N{I|L}]|[RA]|[KV]}[DG]{I|L}{I|L};QM[WK][DG]{I|L}{I|L} 4.452;3.2172;2.9075;2.557 +;-;-;- + 112 + 1 2.127 55750.8 1.0 3016 3439 6451 DOHH2_400M_050219_1,6457 DOHH2_400M_050219_1,6457,QMSERNIL False True QMSERNIL 35.607365 495.755725085735 1867705.25 6451.0 ENSG00000111642|ENST00000544040|CHD4;;ENST00000535717.1_1_12:6679844-6680280:-|nuORF;;nc|ENSG00000111642|Q14839-2|CHD4 5.001726945241292 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6458 35.61 108.0 687250.0 25 0 69108.0 + 6331 DVKGRIYQL 9 104 364.5456399002331 1090.6150903008993 3 364.5451843142509 MULTI CID FTMS 0 0 0 6451 305948.03125 0.2605214859229572 -1 0.1018409729003906 7 Unmodified _DVKGRIYQL_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000536090.1_1_12:6626539-6627126:+|nuORF;ENST00000542472.1_1_12:6626979-6631036:+|nuORF 13.042465956692816 0.4836390050082244 1 {[WT]|[RM]}WKA{[WT]|[RM]}{I|L} 8 7 + 20.085 0.0 0.0 1.8417 1.8417 72.632 0.0 0.0 0.0 3.1825031801593404 5.330918867322296 3.1825031801593404 5.978728531546548 0 0.0 0.0 0.3252574989159953 0.0 {[WT]|[RM]}WKA{[WT]|[RM]}{I|L};{[QN]|[E{I|L}]|[KN]}[KC]KA{[WT]|[RM]}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VDKA{[WT]|[RM]}{I|L};VV[YG]AKDVQ{I|L};VV[YQ]KDVQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WR]A{[WT]|[RM]}{I|L};{[QN]|[E{I|L}]|[KN]}[KC]KA[R{M(Oxidation (M))|F}]P;{[QN]|[E{I|L}]|[KN]}[KC]KA[RP]{M(Oxidation (M))|F};VV[YG]A[WR]Q{I|L};VV[YQ][WR]Q{I|L} 1.8417;1.2935;0.89881;0.70883;0.54736;0.3984;0.31637;0.24985;0.20347;0.046952 -;-;-;-;-;-;-;-;-;- 149 + 1 2.127 64291.1 1.0 3017 3439 6451 DOHH2_400M_050219_1,6458 DOHH2_400M_050219_1,6458,DVKGRIYQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6459 35.613 151.0 378850.0 25 0 45679.0 30935 RKGGRAPG 8 85 399.73859184063866 797.4626307480773 2 399.7384216189384 MULTI CID FTMS 0 0 0 6451 294840.5625 0.5805779172601989 -4 0.4195823669433594 8 Unmodified _RKGGRAPG_ ENST00000284503.6_1_8:11627337-11627439:+|nuORF 9.347437153973935 0.7675937258251505 1 {I|L} 1 8 8.3718 0.0 0.0 1.0498 0.0 0.0 398.2356237674117 283.11911951236567 681.3547432797774 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 {I|L} 1.0498 - 8 + 1 2.127 48552.2 1.0 3018 3439 6451 DOHH2_400M_050219_1,6459 DOHH2_400M_050219_1,6459,RKGGRAPG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6460 35.619 345.0 192810.0 25 0 35379.0 + + -1 SEINGDAGSNYI 12 106 620.2777542629417 1238.5409555926833 2 620.2780029177666 MULTI CID FTMS 0 0 0 6451 208318.40625 0.5171079452011439 -1 0.1018409729003906 9 Carbamidomethyl (C) _DTLHC(Carbamidomethyl (C))GFNYI_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC 32.30548876998284 0.2428506522065767 1 {[ES]|[DT]|[{I|L}C]}{I|L}NGDAG[NS]{I|L}Y 12 -1 + 54.665 0.0 0.0 4.4137 4.4137 79.13 0.0 0.0 0.0 12.458186962473064 39.28637744981195 12.458186962473064 6.61181443446619 0 1.2817183090963749 0.0 1.5679927613948703 0.3807196863200844 {[ES]|[DT]|[{I|L}C]}{I|L}NGDAG[NS]{I|L}Y;{[ES]|[DT]|[{I|L}C]}{I|L}NGDAEE{I|L}Y;{[ES]|[DT]|[{I|L}C]}{I|L}NGDQ[NS]{I|L}Y;{[ES]|[DT]|[{I|L}C]}{I|L}GGGDAG[NS]{I|L}Y;{[ES]|[DT]|[{I|L}C]}{I|L}NYH[NS]{I|L}Y;{[MG]|[TS]}[NP]TDAG[NS]{I|L}Y;{[ES]|[DT]|[{I|L}C]}{I|L}GGGDQ[NS]{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}RTDAG[NS]{I|L}Y;[NG]D{I|L}TDAG[NS]{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}GVTDAG[NS]{I|L}Y 4.4137;3.8799;3.8155;3.6791;3.3805;3.1224;3.0785;3.062;2.9956;2.9135 -;-;-;-;-;-;-;-;-;- 1094 1 2.127 54556.4 1.0 3019 3439 6451 DOHH2_400M_050219_1,6460 DOHH2_400M_050219_1,6460,DTLHCGFNYI False False SEINGDAGSNYI 35.618894 620.278002917767 2095183.875 6451.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 6.247265179951985 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6461 35.622 164.0 441330.0 25 0 42550.0 + 41274 VPHKIYVN 8 104 485.2815903801924 968.5486278271848 2 485.2841064333916 MULTI CID FTMS 0 0 0 6451 197872.59375 1.0 0 0.0 10 Unmodified _VPHKIYVN_ REV__ENSG00000099341|ENST00000215071|PSMD8;REV__ENST00000592001.5_1_19:38865430-38871817:+|nuORF 9.347437153973935 0.7675937258251505 1 W 1 -1 13.495 0.0 0.0 1.3933 0.0 0.0 764.457775021324 0.0 764.457775021324 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.3933 - 271 + 1 2.127 63973.6 1.0 3020 3439 6451 DOHH2_400M_050219_1,6461 DOHH2_400M_050219_1,6461,VPHKIYVN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6462 35.636 800.0 173000.0 25 0 9944.5 + 42370 VTDKFTESVY 10 171 594.7929935925865 1187.571434251973 2 594.7932617068291 MULTI CID FTMS 0 0 0 6451 176902.03125 0.3368510241562635 2 -0.2533760070800781 11 Unmodified _VTDKFTESVY_ ENSG00000254901|ENST00000462790|BORCS8;ENST00000591398.1_1_19:19293380-19297824:-|nuORF;ENST00000602438.1_1_19:19260194-19302926:-|nuORF;nc|ENSG00000254901|Q96FH0-2|BORCS8 31.26834338654808 0.266153677697784 1 SGG{I|L}{[QN]|[E{I|L}]|[KN]}ESVY 10 6 45.506 0.0 0.0 3.8318 0.0 0.0 135.0687428205094 0.0 135.0687428205094 0.0 10.678224217207791 0.0 0.0 0 0.5579021467263782 0.0 1.403598431600422 0.0 SGG{I|L}{[QN]|[E{I|L}]|[KN]}ESVY 3.8318 - 1239 1 2.127 106187.3 0.75 3021 3439 6451 DOHH2_400M_050219_1,6462 DOHH2_400M_050219_1,6462,VTDKFTESVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6463 35.643 403.0 285830.0 25 0 23246.0 + 663 AEMAQNAVRL 10 121 551.7865701705508 1101.5585874079015 2 551.7872192263603 MULTI CID FTMS 0 0 0 6451 169840.796875 0.7965875121926911 -1 0.1018409729003906 12 Unmodified _AEMAQNAVRL_ ENSG00000168036|ENST00000349496|CTNNB1 84.5221896805406 0.0133617038110099 1 {[CP]|[EA]}MAQNAVR{I|L} 10 0 + 80.438 0.0 0.0 7.3022 7.3022 90.821 0.0 0.0 0.0 55.25698788007091 10.311894545657196 10.311894545657196 9.164539485499262 0 1.3494850021680094 0.0 0.0 1.8226825097560424 + + {[CP]|[EA]}MAQNAVR{I|L};{[CP]|[EA]}MAQGGAVR{I|L};{[CP]|[EA]}MA[AG]NAVR{I|L};DDTAQNAVR{I|L};{[CP]|[EA]}MA[AG]GGAVR{I|L};{[CP]|[EA]}MAQ{I|L}[NG]R{I|L};DDTA[AG]NAVR{I|L};DDTAQGGAVR{I|L};{[CP]|[EA]}MAQ{I|L}[VP]P{M(Oxidation (M))|F};{[CP]|[EA]}MA{I|L}Q[NG]R{I|L} 7.3022;6.4702;6.4702;6.0296;5.6415;5.4401;5.1976;5.1976;4.8345;4.758 +;-;-;-;-;-;-;-;-;- + 875 + 1 2.127 89440.1 1.0 3022 3439 6451 DOHH2_400M_050219_1,6463 DOHH2_400M_050219_1,6463,AEMAQNAVRL True True AEMAQNAVRL 35.643163 551.78721922636 1290284.5 6451.0 ENSG00000168036|ENST00000349496|CTNNB1 6.421550591786702 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6464 35.65 391.0 343200.0 25 0 35761.0 + 19034 DLLPKREL 8 120 492.2982585735076 982.5819642138152 2 492.2990905642509 MULTI CID FTMS 0 0 0 6451 145422.265625 0.5276513630229358 -1 0.1018409729003906 13 Unmodified _LDLPLVWK_ nc|ENSG00000111605|Q16630-3|CPSF6;ENSG00000111605|ENST00000435070|CPSF6;nc|ENSG00000111605|Q16630-2|CPSF6;ENST00000547486.1_1_12:69645004-69651771:+|nuORF 23.1484247019978 0.5573009939494978 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}PK 5 3 46.682 0.0 0.0 4.751 0.0 0.0 0.0 413.2152804010376 413.2152804010376 35.26245436609821 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}{I|L}PK 4.751 - 259 + 1 2.127 103118.3 1.0 3023 3439 6451 DOHH2_400M_050219_1,6464 DOHH2_400M_050219_1,6464,LDLPLVWK False False DLLPKREL 35.650157 492.299090564251 5631467.0 6451.0 nc|ENSG00000111605|Q16630-3|CPSF6;;ENSG00000111605|ENST00000435070|CPSF6;;nc|ENSG00000111605|Q16630-2|CPSF6;;ENST00000547486.1_1_12:69645004-69651771:+|nuORF -0.4569707016150157 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6465 35.655 290.0 362860.0 25 0 22897.0 + 32746 SEDGKIHVW 9 141 357.5138421764751 1069.5196971296257 3 357.5136291384697 MULTI CID FTMS 0 0 0 6451 120000.1640625 1.0 0 0.0 14 Unmodified _SEDGKIHVW_ ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF 18.13498045792455 0.3457906370836843 1 W 1 8 14.604 0.0 0.0 1.3655 0.0 0.0 865.4295920044286 0.0 865.4295920044286 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 1.3655 + + 74 + 1 2.127 93286.0 1.0 3024 3439 6451 DOHH2_400M_050219_1,6465 DOHH2_400M_050219_1,6465,SEDGKIHVW False True SEDGKIHVW 35.655475 357.51362913847 569471.5 6451.0 ENST00000487402.1_1_3:52291508-52301068:-|nuORF;;ENSG00000164091|ENST00000296490|WDR82 1.3064578821261723 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6466 35.662 283.0 195370.0 25 0 21430.0 42985 VVTVTNPL 8 99 421.7516385099368 841.4887240866735 2 421.7513915896416 MULTI CID FTMS 0 0 0 6451 102239.2265625 0.199070709736916 -18 2.016357421875 15 Unmodified _VVTVTNPL_ ENSG00000107185|ENST00000378078|RGP1;ENST00000496906.1_1_9:35749376-35750743:+|nuORF 5.760428011301431 0.7893668129297577 1 {I|L} 1 7 12.764 0.0 0.0 1.5169 0.0 0.0 710.3936140786642 0.0 710.3936140786642 0.0 3.1601160735270284 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5169 + + 13 + 1 2.127 46593.5 1.0 3025 3439 6451 DOHH2_400M_050219_1,6466 DOHH2_400M_050219_1,6466,VVTVTNPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6467 35.676 800.0 76618.0 25 0 8998.8 + -1 NEQSIFKMFCC 11 93 732.3127214976103 1462.6108900620204 2 732.8067504763603 MULTI CID FTMS 0 0 0 6451 85329.0859375 0.0488538178904763 7 -0.8028602600097656 16 2 Carbamidomethyl (C) _NEQSIFKMFC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ REV__ENST00000321250.12_1_8:29964894-29965068:+|nuORF 4.897010918128616 0.8520435188433833 1 ANQEA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}Y 9 -1 51.872 0.0 0.0 3.5465 0.0 0.0 327.1530286950254 0.0 327.1530286950254 0.0 32.3538955772686 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 ANQEA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}Y 3.5465 - 1521 + 1 2.127 53065.2 0.4399999976158142 3026 3439 6451 DOHH2_400M_050219_1,6467 DOHH2_400M_050219_1,6467,NEQSIFKMFCC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6468 35.68 234.0 389960.0 25 0 33306.0 40267 VGTNTPPSPGF 11 114 537.2663810073954 0 537.2671386599541 PEAK CID FTMS 0 0 0 6451 350734.59375 1.0 0 0.0 17 Unmodified _VGTNTPPSPGF_ ENSG00000079308|ENST00000682258|TNS1;nc|ENSG00000079308|Q9HBL0-1|TNS1 18.1463463914782 0.3750318954284983 1 S{I|L}GGS 5 10 26.542 0.0 0.0 2.4748 0.0 0.0 536.2695041028782 132.0459383600219 668.3154424629 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.0 S{I|L}GGS 2.4748 - 256 + 1 2.127 75047.8 1.0 3027 3439 6451 DOHH2_400M_050219_1,6468 DOHH2_400M_050219_1,6468,VGTNTPPSPGF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6469 35.69 590.0 137070.0 25 0 10081.0 + 44406 YLYGQTTTY 9 139 555.2601886233122 1108.5058243134242 2 555.2607910037041 MULTI CID FTMS 0 0 0 6451 131508.0625 0.8543326300950265 1 -0.12457275390625 18 Unmodified _YLYGQTTTY_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 13.50788311687929 0.4710407108020397 1 TY 2 7 19.706 0.0 0.0 1.7777 0.0 0.0 826.3837367663524 0.0 826.3837367663524 0.0 2.505040348664771 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + TY 1.7777 + + 505 + 1 2.127 65603.0 1.0 3028 3439 6451 DOHH2_400M_050219_1,6469 DOHH2_400M_050219_1,6469,YLYGQTTTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6470 35.702 626.0 199260.0 25 0 9485.1 8662 EVFWIVGI 8 155 481.76966640749833 961.5247798817968 2 481.7690307497978 MULTI CID FTMS 0 0 0 6451 117372.578125 0.7323676319585622 2 -0.2533760070800781 19 Unmodified _EVFWIVGI_ ENSG00000189050|ENST00000305783|RNFT1;ENST00000486103.6_1_17:58031378-58035783:-|nuORF 10.183394434864962 0.7604730176254005 1 YY 2 8 17.078 0.0 0.0 1.7762 0.0 0.0 0.0 632.3727511041624 632.3727511041624 4.6040937697618745 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YY 1.7762 - 274 + 1 2.127 99590.1 1.0 3029 3439 6451 DOHH2_400M_050219_1,6470 DOHH2_400M_050219_1,6470,EVFWIVGI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6471 35.716 800.0 141410.0 25 0 18809.0 -1 0 96 674.6919106989226 2021.053902696968 3 674.6916992068291 MULTI CID FTMS 0 0 0 6451 99878.1015625 0.8171282897596245 -4 0.4195823669433594 20 1 KPTGART 7 -1 43.483 0.0 0.0 2.1515 0.0 0.0 1024.4835939750303 282.1466158502563 1306.6302098252866 0.0 0.0 0.0 0.0 0 1.0 0.0 0.75 0.0 KPTGART 2.1515 - 471 + 1 2.127 91514.0 0.5299999713897705 3030 3439 6451 DOHH2_400M_050219_1,6471 DOHH2_400M_050219_1,6471, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6473 35.721 54.0 1244000.0 25 0 258770.0 + 10844 GAARPRPG 8 85 391.2250775758323 780.4356022184646 2 391.2249633669853 MULTI CID FTMS 0 0 0 6472 1108238.75 0.8586859395481287 -3 0.3664703369140625 1 Unmodified _GAARPRPG_ REV__ENST00000556039.5_1_14:53162352-53162607:-|nuORF 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.127 59233.2 1.0 3031 3440 6472 DOHH2_400M_050219_1,6473 DOHH2_400M_050219_1,6473,GAARPRPG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6474 35.723 112.0 445330.0 25 0 37246.0 -1 0 63 881.9132660489507 1761.8119791647014 2 881.9137451052666 MULTI CID FTMS 0 0 0 6472 597978.8125 0.5304437134814984 3 -0.339874267578125 2 1 QAEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 10 -1 61.419 0.0 0.0 3.4862 0.0 0.0 734.3741322248062 0.0 734.3741322248062 0.0 41.91122510072759 0.0 0.0 0 1.305462187404089 0.0 0.3494850021680094 0.0 QAEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.4862 - 352 1 2.127 36895.6 1.0 3032 3440 6472 DOHH2_400M_050219_1,6474 DOHH2_400M_050219_1,6474, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6475 35.724 49.0 953450.0 25 0 112750.0 + 45382 YTADGKEVLEY 11 69 644.3086494729744 1286.6027460127486 2 644.3090698122978 MULTI CID FTMS 0 0 0 6472 1050953.25 0.6402153863210771 -1 0.12457275390625 3 Unmodified _YTADGKEVLEY_ ENSG00000196655|ENST00000533632|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889791-118894106:+|nuORF 50.13029200064056 0.116908488078412 1 YTADG 5 6 58.716 0.0 0.0 4.5637 0.0 0.0 0.0 776.3740328424436 776.3740328424436 24.453781259591096 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.4247425010840047 0.0 + YTADG 4.5637 + + 623 + 1 2.127 43544.1 1.0 3033 3440 6472 DOHH2_400M_050219_1,6475 DOHH2_400M_050219_1,6475,YTADGKEVLEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6476 35.727 100.0 608090.0 25 0 52273.0 + 18924 LCLFFLISL 9 103 356.8782608733009 1067.6129532201028 3 356.8781616091728 MULTI CID FTMS 0 0 0 6472 572197.0625 1.0 0 0.0 4 Unmodified _LCLFFLISL_ REV__ENST00000389341.9_1_19:42593289-42593457:-|nuORF 13.50788311687929 0.4710407108020397 1 {I|L} 1 -1 13.979 0.0 0.0 1.3094 0.0 0.0 936.5178889884606 0.0 936.5178889884606 0.0 0.1671187774347515 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3094 + + 135 + 1 2.127 57081.0 1.0 3034 3440 6472 DOHH2_400M_050219_1,6476 DOHH2_400M_050219_1,6476,LCLFFLISL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6477 35.729 137.0 586010.0 25 0 106110.0 + 35344 STDKFKTDFY 10 85 417.86814750123546 1250.5826131039064 3 417.8677856326103 MULTI CID FTMS 0 0 0 6472 404764.28125 0.8195389231188 -1 0.12457275390625 5 Unmodified _STDKFKTDFY_ ENSG00000168090|ENST00000303904|COPS6 13.042465956692816 0.6287021003332052 1 {M(Oxidation (M))|F}RST{M(Oxidation (M))|F}QP 7 9 35.91 0.0 0.0 2.8715 0.0 0.0 369.15138522126966 0.0 369.15138522126966 0.0 20.42542012017968 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {M(Oxidation (M))|F}RST{M(Oxidation (M))|F}QP 2.8715 - 541 + 1 2.127 69430.3 1.0 3035 3440 6472 DOHH2_400M_050219_1,6477 DOHH2_400M_050219_1,6477,STDKFKTDFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6478 35.733 171.0 556360.0 25 0 37953.0 + 39281 VADKVHLMY 9 135 359.1921622366442 1074.5546573101326 3 359.1916381716728 MULTI CID FTMS 0 0 0 6472 389232.28125 0.4409560075379437 -1 0.12457275390625 6 Unmodified _VADKVHLMY_ ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF 19.256988751693697 0.3154191944385105 1 [DV][HK]{I|L}AMVY 9 4 + 29.115 0.0 0.0 2.7095 2.7095 70.721 0.0 0.0 0.0 8.484769324350555 5.039237471316298 5.039237471316298 3.0102999566398125 0 0.3182503180159344 1.3010299956639813 0.0 0.0 [DV][HK]{I|L}AMVY;[DV][HK]A{I|L}MVY;[DV][HK]{I|L}AVMY;[DV][HK]{I|L}MAVY;[DV][KA]H{I|L}MVY;[DV][HK]{I|L}G{I|L}MY;[DV][HK]A{I|L}VMY;[DV][KA]H{I|L}VMY;[DV][HK]AV{I|L}MY;[H{I|L}]TQ{I|L}AMVY 2.7095;2.4293;2.367;2.2654;2.2405;2.0869;2.0869;1.898;1.8067;1.6999 -;-;-;-;-;-;-;-;-;- 405 1 2.127 84509.6 1.0 3036 3440 6472 DOHH2_400M_050219_1,6478 DOHH2_400M_050219_1,6478,VADKVHLMY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6479 35.737 239.0 412560.0 25 0 19489.0 + 35345 STDKFKTDFY 10 110 626.2982846912115 1250.582016449223 2 626.2979614138603 MULTI CID FTMS 0 0 0 6472 342884.5 0.9849548102111454 -1 0.12457275390625 7 Unmodified _STDKFKTDFY_ ENSG00000168090|ENST00000303904|COPS6 83.27773906761396 0.014381580010361 1 {[MG]|[TS]}DK{M(Oxidation (M))|F}KTD{M(Oxidation (M))|F}Y 10 0 + 73.862 0.0 0.0 5.9062 5.9062 78.323 0.0 0.0 0.0 4.722098477772562 15.02697515943354 4.722098477772562 1.249387366082999 0 2.7302046884880937 0.0 1.7051120522087029 0.0 + + {[MG]|[TS]}DK{M(Oxidation (M))|F}KTD{M(Oxidation (M))|F}Y;{[MG]|[TS]}DK{M(Oxidation (M))|F}RTS{M(Oxidation (M))|F}Y;{[MG]|[TS]}DK{M(Oxidation (M))|F}KES{M(Oxidation (M))|F}Y;{[MG]|[TS]}DK{M(Oxidation (M))|F}R{M(Oxidation (M))|F}TSY;{[QD]|[EN]|[WG]|[KD]|[RS]}TS{M(Oxidation (M))|F}KTD{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}TSKTD{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}TS{M(Oxidation (M))|F}RTS{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}TSRTS{M(Oxidation (M))|F}Y;AATTS{M(Oxidation (M))|F}KTD{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}TS{M(Oxidation (M))|F}KES{M(Oxidation (M))|F}Y 5.9062;5.8063;5.6655;5.5473;5.5286;5.4332;5.4287;5.3333;5.3323;5.2879 +;-;-;-;-;-;-;-;-;- + 8599 1 2.127 77130.6 1.0 3037 3440 6472 DOHH2_400M_050219_1,6479 DOHH2_400M_050219_1,6479,STDKFKTDFY True True STDKFKTDFY 35.737198 626.29796141386 2563328.25 6472.0 ENSG00000168090|ENST00000303904|COPS6 7.527779261271159 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6480 35.741 171.0 468350.0 25 0 58507.0 + 26386 NTDHQTQLLY 10 84 616.7983944388789 1231.5822359445576 2 616.7986328005791 MULTI CID FTMS 0 0 0 6472 298220.71875 0.0548317224799315 -2 0.2264137268066406 8 Unmodified _NTDHQTQLLY_ ENSG00000051180|ENST00000267868|RAD51;nc|ENSG00000051180|Q06609-2|RAD51;nc|ENSG00000051180|Q06609-3|RAD51;nc|ENSG00000051180|Q06609-4|RAD51 55.50274090549119 0.048383292844968 1 QTQ{I|L}{I|L}Y 6 4 65.214 0.0 0.0 5.2952 0.0 0.0 467.17805678535314 0.0 467.17805678535314 0.0 47.51139416000356 0.0 0.0 0 1.0 0.0 1.1549471895720984 1.305462187404089 + QTQ{I|L}{I|L}Y 5.2952 + + 207 1 2.127 62473.9 1.0 3038 3440 6472 DOHH2_400M_050219_1,6480 DOHH2_400M_050219_1,6480,NTDHQTQLLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6481 35.746 310.0 353520.0 25 0 20240.0 + 2042 APKPKWTQL 9 142 534.8140031434376 0 534.8141357302666 PEAK CID FTMS 0 0 0 6472 252638.28125 1.0 0 0.0 9 Unmodified _APKPKWTQL_ ENSG00000239382|ENST00000378875|ALKBH6;ENST00000392183.7_1_19:36501753-36505114:-|nuORF;ENST00000461668.5_3_19:36501484-36504244:-|nuORF;ENST00000468004.5_1_19:36501827-36504438:-|nuORF;ENST00000481257.5_3_19:36501646-36504244:-|nuORF;ENST00000590666.5_1_19:36502237-36505114:-|nuORF;nc|ENSG00000239382|Q3KRA9-2|ALKBH6;nc|ENSG00000239382|Q3KRA9-3|ALKBH6 93.16586880292088 0.022565314183906 1 APKQTWP 7 5 28.238 0.0 0.0 2.6449 0.0 0.0 131.09557510988742 125.07251917056875 256.16809428045616 0.0 0.0 0.0 0.0 0 0.2302046884880938 0.0 0.3494850021680094 0.25 APKQTWP 2.6449 - 429 + 1 2.127 86465.6 1.0 3039 3440 6472 DOHH2_400M_050219_1,6481 DOHH2_400M_050219_1,6481,APKPKWTQL True True APKPKWTQL 35.746206 534.814135730267 1576709.75 6472.0 ENST00000468004.5_1_19:36501827-36504438:-|nuORF;;nc|ENSG00000239382|Q3KRA9-3|ALKBH6;;ENST00000461668.5_3_19:36501484-36504244:-|nuORF;;ENSG00000239382|ENST00000378875|ALKBH6;;ENST00000392183.7_1_19:36501753-36505114:-|nuORF;;ENST00000590666.5_1_19:36502237-36505114:-|nuORF;;nc|ENSG00000239382|Q3KRA9-2|ALKBH6;;ENST00000481257.5_3_19:36501646-36504244:-|nuORF 6.818761666615804 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6482 35.751 260.0 211640.0 25 0 17059.0 + 7120 EEMNPQLGY 9 91 540.7367698976494 1079.4589868620988 2 540.7370483279228 MULTI CID FTMS 0 0 0 6472 201793.890625 1.0 0 0.0 10 Unmodified _EEMNPQLGY_ ENSG00000144357|ENST00000272793|UBR3;nc|ENSG00000144357|Q6ZT12-2|UBR3;nc|ENSG00000144357|Q6ZT12-3|UBR3;nc|ENSG00000144357|Q6ZT12-4|UBR3 64.23631603340823 0.0237365939569086 1 {I|L}GY 3 6 28.812 0.0 0.0 2.6691 0.0 0.0 728.27858022323 0.0 728.27858022323 0.0 0.2506781661521273 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}GY 2.6691 + + 99 + 1 2.127 45859.9 1.0 3040 3440 6472 DOHH2_400M_050219_1,6482 DOHH2_400M_050219_1,6482,EEMNPQLGY True True EEMNPQLGY 35.751031 540.737048327923 1250809.25 6472.0 ENSG00000144357|ENST00000272793|UBR3;;nc|ENSG00000144357|Q6ZT12-3|UBR3;;nc|ENSG00000144357|Q6ZT12-4|UBR3;;nc|ENSG00000144357|Q6ZT12-2|UBR3 7.7139865557352705 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6483 35.765 800.0 181350.0 25 0 20888.0 + 7366 EGDDGKTYFY 10 157 597.7511143708448 1193.4876758084897 2 597.7512695193291 MULTI CID FTMS 0 0 0 6472 160870.046875 1.0 0 0.0 11 Unmodified _EGDDGKTYFY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 41.95555342248728 0.1369168616057562 1 [YT][WD]HY{M(Oxidation (M))|F}Y 8 6 + 43.916 0.0 0.0 3.6796 3.6796 74.032 0.0 0.0 0.0 3.705299398537576 3.705299398537576 3.705299398537576 3.705299398537576 0 0.5 1.3979400086720375 1.7134679910804405 0.0 [YT][WD]HY{M(Oxidation (M))|F}Y;[QA]{M(Oxidation (M))|F}YTW{[ES]|[DT]|[{I|L}C]}Y;[YT][WD]YH{M(Oxidation (M))|F}Y;[YT]{M(Oxidation (M))|F}[DG]TYE[QA];[YT][WD]T[QA]{M(Oxidation (M))|F}Y;[QA]{M(Oxidation (M))|F}YT[DG]{[ET]|[MV]}Y;[QA]{M(Oxidation (M))|F}YT{[DA]|[EG]}{[ES]|[DT]|[{I|L}C]}Y;[YT][WD]TY{M(Oxidation (M))|F}[QA];[YT]{M(Oxidation (M))|F}KGD[WD]Y;[YT]{M(Oxidation (M))|F}[VS]N[WD]Y 3.6796;3.3692;3.1131;3.095;3.0559;2.7303;2.5976;2.5344;2.4444;2.4237 -;-;-;-;-;-;-;-;-;- 2341 1 2.127 107904.1 0.7799999713897705 3041 3440 6472 DOHH2_400M_050219_1,6483 DOHH2_400M_050219_1,6483,EGDDGKTYFY False True EGDDGKTYFY 35.764862 597.751269519329 1122810.625 6472.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 5.135897159576416 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6484 35.774 497.0 408560.0 25 0 88150.0 + 31773 RSGVIVRL 8 153 450.2928916803138 898.5712304274276 2 450.2928039431572 MULTI CID FTMS 0 0 0 6472 163424.0 0.557546244178731 -1 0.12457275390625 12 Unmodified _RSGVIVRL_ ENSG00000155561|ENST00000285968|NUP205 17.11289562659939 0.6581031263288403 1 RSR 3 5 19.971 0.0 0.0 2.2225 0.0 0.0 0.0 496.32468591861567 496.32468591861567 5.124314421929469 0.0 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 RSR 2.2225 - 81 + 1 2.127 160383.8 1.0 3042 3440 6472 DOHH2_400M_050219_1,6484 DOHH2_400M_050219_1,6484,RSGVIVRL False True RSGVIVRL 35.773619 450.292803943157 1638563.5 6472.0 ENSG00000155561|ENST00000285968|NUP205 2.138317863146464 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6485 35.787 800.0 411320.0 25 0 95262.0 + 31671 RRKDGVFLY 9 154 577.3274960079722 1152.6404390827445 2 577.3274413943291 MULTI CID FTMS 0 0 0 6472 163722.546875 0.5794866590642376 -1 0.12457275390625 13 Unmodified _RRKDGVFLY_ ENSG00000125691|ENST00000479035|RPL23;ENST00000320371.6_1_21:30369936-30370179:-|nuORF;ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENST00000584912.5_1_17:37006588-37006753:-|nuORF 51.487983226225225 0.0371074584807926 1 RRKDGV{M(Oxidation (M))|F}{I|L}Y 9 0 + 75.525 0.0 0.0 6.5524 6.5524 93.107 0.0 0.0 0.0 2.922152515121212 60.633765716649776 2.922152515121212 20.03739749141846 0 1.4559771852360797 0.0 0.0 1.4802046884880935 + + RRKDGV{M(Oxidation (M))|F}{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}RRGV{M(Oxidation (M))|F}{I|L}Y;[{I|L}T]{I|L}{I|L}DGV{M(Oxidation (M))|F}{I|L}Y;[TP]{I|L}{M(Oxidation (M))|F}PR{M(Oxidation (M))|F}{I|L}Y;[TP]{M(Oxidation (M))|F}{I|L}PR{M(Oxidation (M))|F}{I|L}Y;RRKDGV[KS][HA];{[VA]|[{I|L}G]}[KG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{M(Oxidation (M))|F}{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}RRGV[KS][HA];{[QD]|[EN]|[WG]|[KD]|[RS]}RRR[KS][HA];[EP][KS]VGD{I|L}{I|L}[VP] 6.5524;4.814;3.84;3.0587;2.8663;2.5974;2.2782;0.85899;0.55344;0.33977 +;-;-;-;-;-;-;-;-;- + 530 1 2.127 249780.5 0.7599999904632568 3043 3440 6472 DOHH2_400M_050219_1,6485 DOHH2_400M_050219_1,6485,RRKDGVFLY True True RRKDGVFLY 35.787452 577.327441394329 11556211.75 6472.0 ENST00000584583.1_1_17:37006387-37006753:-|nuORF;;ENST00000584912.5_1_17:37006588-37006753:-|nuORF;;ENST00000320371.6_1_21:30369936-30370179:-|nuORF;;ENSG00000125691|ENST00000479035|RPL23 6.309063116709392 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6486 35.797 573.0 242310.0 25 0 17899.0 + 12360 GTEFGPGTAY 10 157 500.2248514878904 998.4351500425807 2 500.2253600955009 MULTI CID FTMS 0 0 0 6472 145515.90625 0.8647106892352038 -1 0.12457275390625 14 Unmodified _GTEFGPGTAY_ ENSG00000097033|ENST00000370558|SH3GLB1;nc|ENSG00000097033|Q9Y371-2|SH3GLB1;nc|ENSG00000097033|Q9Y371-3|SH3GLB1 46.020951573049366 0.1035046897853725 1 {[WT]|[RM]}{M(Oxidation (M))|F}GT[PG]AY 9 4 + 27.575 0.0 0.0 2.7619 2.7619 68.963 0.0 0.0 0.0 7.425588334839958 7.555110764808056 7.425588334839958 1.7069622716897506 0 0.2887254899964357 0.0 0.535666875892183 0.0 {[WT]|[RM]}{M(Oxidation (M))|F}GT[PG]AY;{[WT]|[RM]}{M(Oxidation (M))|F}GT[QP]Y;{[WT]|[RM]}{M(Oxidation (M))|F}GT[YQ]P;{[WT]|[RM]}DD[KT]AY;{[WT]|[RM]}{M(Oxidation (M))|F}G{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[ET]|[MV]};{[WT]|[RM]}{M(Oxidation (M))|F}GT{[SA]|[TG]}{[ET]|[MV]};{[WT]|[RM]}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]{[ET]|[MV]};{[WT]|[RM]}{M(Oxidation (M))|F}[HT]NPP;{[WT]|[RM]}{M(Oxidation (M))|F}G{[RE]|[WV]}{[CT]|[{M(Oxidation (M))|F}G]};{[WT]|[RM]}{M(Oxidation (M))|F}GT[PS]{[CT]|[{M(Oxidation (M))|F}G]} 2.7619;2.5909;0.99734;0.87646;0.77988;0.64935;0.57612;0.36694;0.34435;0.21381 -;-;-;-;-;-;-;-;-;- 420 + 1 2.127 108651.5 1.0 3044 3440 6472 DOHH2_400M_050219_1,6486 DOHH2_400M_050219_1,6486,GTEFGPGTAY True True GTEFGPGTAY 35.797477 500.225360095501 1546190.875 6472.0 nc|ENSG00000097033|Q9Y371-3|SH3GLB1;;nc|ENSG00000097033|Q9Y371-2|SH3GLB1;;ENSG00000097033|ENST00000370558|SH3GLB1 5.693554878234863 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6487 35.803 210.0 298200.0 25 0 33183.0 + 7324 EEYMNKPTF 9 92 579.7597851707619 1157.5050174083235 2 579.7589599490166 MULTI CID FTMS 0 0 0 6472 107130.1171875 0.4159074261952749 -1 0.12457275390625 15 Unmodified _EEYMNKPTF_ ENSG00000152056|ENST00000396654|AP1S3 60.07390631473393 0.0260411565414776 1 EEYMNKPT{M(Oxidation (M))|F} 9 0 + 80.314 0.0 0.0 6.9386 6.9386 90.698 0.0 0.0 0.0 60.39258754269092 14.09256854528806 14.09256854528806 9.208187539523747 0 0.75 2.0 0.7742275032520141 0.0 + + EEYMNKPT{M(Oxidation (M))|F};EEYMGGKPT{M(Oxidation (M))|F};EEY{[SA]|[TG]}SKPT{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RK]{[SA]|[TG]}Y[HC];{[MS]|[{M(Oxidation (M))|F}A]}H[H{I|L}]MY[HC] 6.9386;6.143;5.4708;1.4783;1.1941 +;-;-;-;- + 170 + 1 2.127 51716.0 1.0 3045 3440 6472 DOHH2_400M_050219_1,6487 DOHH2_400M_050219_1,6487,EEYMNKPTF True True EEYMNKPTF 35.80295 579.758959949017 1662437.75 6472.0 ENSG00000152056|ENST00000396654|AP1S3 9.246455192565918 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6488 35.817 800.0 234030.0 25 0 13177.0 + 8277 QEIEVRPGI 9 186 520.7908693451608 1039.5671857571217 2 520.7913085818291 MULTI CID FTMS 0 0 0 6472 266320.75 1.0 0 0.0 16 Unmodified _EQLEVRLGP_ ENSG00000130741|ENST00000253039|EIF2S3 43.85829265575387 0.0542763391141878 1 QE{I|L}EVRPG{I|L} 9 4 + 60.318 0.0 0.0 5.8023 5.8023 83.718 0.0 0.0 0.0 42.082787739115446 3.608768658904197 3.608768658904197 6.247495427556444 0 0.9308845489566888 1.2218487496163564 0.3807196863200844 0.0 QE{I|L}EVRPG{I|L};QE{I|L}EVRAPV;QE{I|L}EVRAVP;QE{I|L}EVR{I|L}GP;QE{I|L}EVRPAV;{[CP]|[EA]}G{I|L}EVRPG{I|L};{[CP]|[EA]}G{I|L}EVRAPV;{[CP]|[EA]}G{I|L}EVRAVP;{[CP]|[EA]}G{I|L}EVR{I|L}GP;{[CP]|[EA]}G{I|L}EVRPAV 5.8023;5.2013;5.0477;5.0477;4.8335;3.9411;3.3401;3.1865;3.1865;2.9723 -;-;-;-;-;-;-;-;-;- 367 + 1 2.127 145317.7 0.8899999856948853 3046 3440 6472 DOHH2_400M_050219_1,6488 DOHH2_400M_050219_1,6488,EQLEVRLGP True True QEIEVRPGI 35.816783 520.791308581829 1462214.375 6472.0 ENSG00000130741|ENST00000253039|EIF2S3 5.2707540194193525 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6489 35.821 227.0 288480.0 25 0 28639.0 + 38989 TVQPTSGHLN 10 108 527.270206853408 0 527.2703124880791 PEAK CID FTMS 0 0 0 6472 244584.78125 1.0 0 0.0 17 Unmodified _TVQPTSGHLN_ REV__ENSG00000111452|ENST00000261654|ADGRD1;REV__nc|ENSG00000111452|Q6QNK2-2|ADGRD1;REV__nc|ENSG00000111452|Q6QNK2-4|ADGRD1 8.745405648335112 0.3843311602926832 1 V 1 -1 6.9897 0.0 0.0 0.66409 0.0 0.0 229.0991772792784 721.3361910455686 950.4353683248472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.66409 + + 16 + 1 2.127 58223.0 1.0 3047 3440 6472 DOHH2_400M_050219_1,6489 DOHH2_400M_050219_1,6489,TVQPTSGHLN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6490 35.835 800.0 180680.0 25 0 13854.0 -1 0 167 587.3273734823094 586.3200970157094 1 587.3279296755791 MULTI CID FTMS 0 0 0 6472 185624.09375 0.3680005595618318 2 -0.2350425720214843 18 1 Y 1 -1 14.604 0.0 0.0 2.4908 0.0 0.0 405.24555585535626 0.0 405.24555585535626 0.0 2.808487663269968 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.4908 - 187 + 1 2.127 110043.6 0.7400000095367432 3048 3440 6472 DOHH2_400M_050219_1,6490 DOHH2_400M_050219_1,6490, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6491 35.845 505.0 223860.0 25 0 27850.0 + 20533 LLLRTQSL 8 123 472.30234999021815 0 472.3024780154228 PEAK CID FTMS 0 0 0 6472 103528.1953125 1.0 0 0.0 19 Unmodified _LLLRTQSL_ REV__ENST00000394056.6_1_6:43027976-43028307:+|nuORF 15.768221252438446 0.4767174489346095 1 M{I|L} 2 -1 9.464 0.0 0.0 1.004 0.0 0.0 471.3239627572547 224.12993799381096 695.4539007510657 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L} 1.004 - 30 + 1 2.127 93591.3 1.0 3049 3440 6472 DOHH2_400M_050219_1,6491 DOHH2_400M_050219_1,6491,LLLRTQSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6493 35.85 32.0 1765900.0 25 0 214080.0 + 20137 LKPGILPVPK 10 74 531.3576357182029 1060.7007185032055 2 531.3579589724541 MULTI CID FTMS 0 0 0 6492 1290777.125 0.2995412062688021 1 -0.1062393188476562 1 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 19.62595529434964 0.5182375435722777 1 K{I|L}AP{I|L}VKD{I|L} 9 -1 81.948 0.0 0.0 7.7259 0.0 0.0 0.0 80.05132471256093 80.05132471256093 63.78653141768609 0.0 0.0 0.0 0 1.924742501084005 0.0 0.6861818737241735 0.0 K{I|L}AP{I|L}VKD{I|L} 7.7259 - 141 + 1 2.127 46850.4 1.0 3050 3441 6492 DOHH2_400M_050219_1,6493 DOHH2_400M_050219_1,6493,LKPGILPVPK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6494 35.851 34.0 2288900.0 25 0 163280.0 + 31672 RRKDGVFLY 9 71 385.2208422811394 1152.6406974436184 3 385.2206298708916 MULTI CID FTMS 0 0 0 6492 1695553.75 1.0 0 0.0 2 Unmodified _RRKDGVFLY_ ENSG00000125691|ENST00000479035|RPL23;ENST00000320371.6_1_21:30369936-30370179:-|nuORF;ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENST00000584912.5_1_17:37006588-37006753:-|nuORF 10.898955630103616 0.5416613042237204 1 GV{M(Oxidation (M))|F}{I|L}Y 5 4 39.196 0.0 0.0 3.4005 0.0 0.0 555.3258330603697 0.0 555.3258330603697 0.0 32.2062251842808 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + GV{M(Oxidation (M))|F}{I|L}Y 3.4005 + + 21 1 2.127 65677.4 1.0 3051 3441 6492 DOHH2_400M_050219_1,6494 DOHH2_400M_050219_1,6494,RRKDGVFLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6495 35.852 38.0 1597600.0 25 0 367670.0 + 2684 ATEDPWKTNY 10 70 612.7803233429337 1223.5460937526673 2 612.7803222537041 MULTI CID FTMS 0 0 0 6492 1495021.75 0.0554420308413411 -2 0.2533760070800781 3 Unmodified _ATEDPWKTNY_ ENSG00000139684|ENST00000378720|ESD 46.0223103267499 0.103496714999793 1 [TA]EDPWKTNY 10 0 [TA]E + + 48.531 25.903 8.602 3.9664 3.9664 53.101 0.0 0.0 0.0 0.0 13.336907349847776 0.0 0.0 0 1.274227503252014 0.0 0.0 0.7742275032520141 + + [TA]EDPWKTNY 3.9664 + + 273 + 1 2.127 51707.8 1.0 3052 3441 6492 DOHH2_400M_050219_1,6495 DOHH2_400M_050219_1,6495,ATEDPWKTNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6496 35.854 97.0 533200.0 25 0 32551.0 + 39282 VADKVHLMY 9 87 538.2836748683916 1074.552796803583 2 538.2845947146416 MULTI CID FTMS 0 0 0 6492 542814.75 1.0 0 0.0 4 Unmodified _VADKVHLMY_ ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF 55.50274090549119 0.0285720310785888 1 VA[WR]H{I|L}MY 8 3 + 66.036 0.0 0.0 6.1454 6.1454 86.567 0.0 0.0 0.0 8.066884185923655 8.066884185923655 8.066884185923655 8.066884185923655 0 2.017220322351953 2.0 0.0 0.0 VA[WR]H{I|L}MY;{[VA]|[{I|L}G]}[WR]H{I|L}MY;{[VA]|[{I|L}G]}D[RP]{[QG]|[NA]}AVY;{[VA]|[{I|L}G]}D[RP]QQVY;{[VA]|[{I|L}G]}[WR][NP]AVY;[H{I|L}]TQ{I|L}G{I|L}MY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[WH]AVY;[W{I|L}]{[NV]|[RG]}H{I|L}MY;[H{I|L}]TQ{I|L}AVMY;[H{I|L}][WR]G{I|L}MY 6.1454;5.3947;4.2354;4.0716;3.6276;3.5719;3.4158;3.3547;3.2918;3.2741 -;-;-;-;-;-;-;-;-;- 186 + 1 2.127 48524.7 1.0 3053 3441 6492 DOHH2_400M_050219_1,6496 DOHH2_400M_050219_1,6496,VADKVHLMY True True VADKVHLMY 35.854041 538.284594714642 7979614.0 6492.0 ENSG00000121060|ENST00000316881|TRIM25;;ENST00000572021.5_1_17:54969063-54989474:-|nuORF 6.688408692677816 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6497 35.856 92.0 536400.0 25 0 74656.0 + 7946 ELRSQISSL 9 90 516.7861680318165 1031.5577831304329 2 516.7879516482353 MULTI CID FTMS 0 0 0 6492 375807.40625 1.0 0 0.0 5 Unmodified _ELRSQISSL_ ENSG00000204178|ENST00000374343|MACO1;nc|ENSG00000204178|Q8N5G2-2|MACO1;nc|ENSG00000204178|Q8N5G2-3|MACO1 39.94969957227396 0.0757326808254658 1 {NN|[MP]|[D{I|L}]|[EV]}[KQ]E{I|L}SS{I|L} 9 4 + 54.785 0.0 0.0 5.3109 5.3109 87.514 0.0 0.0 0.0 12.741756050320085 25.0926021216468 12.741756050320085 12.825834421237516 0 0.7302046884880937 1.6989700043360187 1.048455006504028 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KQ]E{I|L}SS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]T{I|L}DS{I|L};[WR]{I|L}[RD]SS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]T{I|L}SD{I|L};[HV][YT]{I|L}{I|L}SS{I|L};[{I|L}T][RN]E{I|L}SS{I|L};[{M(Oxidation (M))|F}V]S[PA][KP]SS{I|L};[{M(Oxidation (M))|F}V][RN]P{I|L}SS{I|L};[WR]{[SA]|[TG]}{I|L}{I|L}SS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}D[PA]RRS{I|L} 5.3109;4.0676;3.7781;3.1933;3.079;3.0265;2.9893;2.9083;2.9083;2.7964 -;-;-;-;-;-;-;-;-;- 277 1 2.127 44495.6 1.0 3054 3441 6492 DOHH2_400M_050219_1,6497 DOHH2_400M_050219_1,6497,ELRSQISSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6498 35.859 127.0 585300.0 25 0 47493.0 + 4713 DEARDLIQRY 10 83 426.8860714996487 1277.636385099146 3 426.8861572146416 MULTI CID FTMS 0 0 0 6492 352199.875 1.0 0 0.0 6 Unmodified _DEARDLIQRY_ ENSG00000174231|ENST00000304992|PRPF8 47.7319792270244 0.0934623409360514 1 DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}YQR 10 2 + 70.239 0.0 0.0 5.4976 5.4976 78.43 0.0 0.0 0.0 36.53212513775344 2.455126678141511 2.455126678141511 2.455126678141511 0 1.5924778212679485 2.0 0.0 0.2887254899964357 DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}YQR;DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}QRY;DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}QYR 5.4976;5.3054;5.0263 -;+;- + 199 + 1 2.127 70731.0 1.0 3055 3441 6492 DOHH2_400M_050219_1,6498 DOHH2_400M_050219_1,6498,DEARDLIQRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6499 35.862 156.0 419900.0 25 0 52776.0 + 30561 RENYDIIKTY 10 52 657.8372344319745 1313.6599159307489 2 657.8386108279228 MULTI CID FTMS 0 0 0 6492 346129.0 1.0 0 0.0 7 Unmodified _RENYDIIKTY_ ENSG00000169018|ENST00000306917|FEM1B 38.61474834105838 0.1721950110283317 1 {I|L}{I|L}KTY 5 5 61.013 0.0 0.0 4.6445 0.0 0.0 677.2775435102344 0.0 677.2775435102344 0.0 50.55584714187489 0.0 0.0 0 1.5 0.0 0.3807196863200844 0.4247425010840047 + {I|L}{I|L}KTY 4.6445 + + 38 1 2.127 57668.9 1.0 3056 3441 6492 DOHH2_400M_050219_1,6499 DOHH2_400M_050219_1,6499,RENYDIIKTY False True RENYDIIKTY 35.86177 657.838610827923 2085974.5 6492.0 ENSG00000169018|ENST00000306917|FEM1B 6.012698332468669 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6500 35.866 228.0 380990.0 25 0 104340.0 + 4714 DEARDLIQRY 10 58 639.8251907628736 1277.635828592547 2 639.8254882693291 MULTI CID FTMS 0 0 0 6492 280107.71875 1.0 0 0.0 8 Unmodified _DEARDLIQRY_ ENSG00000174231|ENST00000304992|PRPF8 60.899326713953855 0.0342270825141046 1 DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}QRY 10 0 + 98.626 0.0 0.0 7.7194 7.7194 91.163 0.0 0.0 0.0 32.01667520279372 9.366258620628784 9.366258620628784 9.164539485499247 0 2.8494850021680094 1.6989700043360187 0.0 0.8807196863200843 + + DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}QRY;DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}[AG]RY;DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}QYR;DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}[AG]YR;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}P]D{I|L}{I|L}QRY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}P]D{I|L}{I|L}[AG]RY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}P]D{I|L}{I|L}QYR;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}P]D{I|L}{I|L}[AG]YR 7.7194;7.0021;6.9863;6.269;4.3305;3.6132;3.5974;2.8801 +;-;-;-;-;-;-;- + 197 + 1 2.127 70972.0 1.0 3057 3441 6492 DOHH2_400M_050219_1,6500 DOHH2_400M_050219_1,6500,DEARDLIQRY True True DEARDLIQRY 35.866076 639.825488269329 3790009.25 6492.0 ENSG00000174231|ENST00000304992|PRPF8 8.987403869628906 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6501 35.869 166.0 226620.0 25 0 14908.0 + -1 ELDPMAMTQKY 11 56 671.8046318398307 1341.5947107464613 2 671.8048583865166 MULTI CID FTMS 0 0 0 6492 233675.609375 0.8365671502363328 3 -0.3205032348632812 9 Oxidation (M) _ELDPM(Oxidation (M))AMTQKY_ ENST00000534765.1_1_11:65835264-65836005:+|nuORF;ENSG00000087365|ENST00000322535|SF3B2 28.23362336080872 0.4292685378469897 1 {[QN]|[E{I|L}]|[KN]}DPMSM[QT]KY 11 -1 + 56.943 0.0 0.0 4.2444 4.2444 74.823 0.0 0.0 0.0 35.0044105827082 11.84933485784594 11.84933485784594 3.0102999566398125 0 0.2742275032520141 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}DPMSM[QT]KY;{[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}AM[QT]KY;{[QN]|[E{I|L}]|[KN]}DPMSM[KA]ASY;{[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}AM[KA]ASY;[NG]ADP{M(Oxidation (M))|F}AM[QT]KY;{[QN]|[E{I|L}]|[KN]}D[WE]M[QT]KY;[NG]ADP{M(Oxidation (M))|F}AM[KA]ASY;{[QN]|[E{I|L}]|[KN]}D[WE]M[KA]ASY;[HM]A[KA]MA{M(Oxidation (M))|F}PD[HS] 4.2444;4.02;3.9918;3.7675;3.0221;2.8054;2.7718;2.5501;1.5522 -;+;-;-;-;-;-;-;- + 260 + 1 2.127 35662.3 1.0 3058 3441 6492 DOHH2_400M_050219_1,6501 DOHH2_400M_050219_1,6501,ELDPMAMTQKY False False ELDPMAMTQKY 35.869334 671.804858386517 1882484.5 6492.0 ENST00000534765.1_1_11:65835264-65836005:+|nuORF;;ENSG00000087365|ENST00000322535|SF3B2 7.271058559417725 2.0 True 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6502 35.874 230.0 326340.0 25 0 28187.0 + + 16023 AEIGNKDIKF 10 105 378.8765838772735 0 378.8765441775322 PEAK CID FTMS 0 0 0 6492 217813.90625 1.0 0 0.0 10 Unmodified _ITGQAGLQTVF_ ENST00000463044.1_1_3:31667577-31674651:+|nuORF;ENSG00000163527|ENST00000295770|STT3B 21.53697664764585 0.3337597044351383 1 EMG 3 -1 9.9215 0.0 0.0 1.3128 0.0 0.0 117.43570322417813 318.1724947565063 435.6081979806844 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EMG 1.3128 - 88 + 1 2.127 63930.4 1.0 3059 3441 6492 DOHH2_400M_050219_1,6502 DOHH2_400M_050219_1,6502,ITGQAGLQTVF False False AEIGNKDIKF 35.873653 378.876544177532 953140.4375 6492.0 ENST00000463044.1_1_3:31667577-31674651:+|nuORF;;ENSG00000163527|ENST00000295770|STT3B 4.526189168294271 3.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6503 35.882 455.0 231120.0 25 0 24711.0 + 15869 ISPKVKMAL 9 125 493.8074632452994 985.6003735573988 2 493.8071777224541 MULTI CID FTMS 0 0 0 6492 176379.25 1.0 0 0.0 11 Unmodified _ISPKVKMAL_ ENSG00000164754|ENST00000297338|RAD21 28.49450938151212 0.1686335738423394 1 {I|L}SPKVHVP 8 4 61.267 0.0 0.0 6.2162 0.0 0.0 0.0 125.07248865299064 125.07248865299064 46.66299747024347 0.0 0.0 0.0 0 0.5796896906561032 1.6989700043360187 0.0 0.0 {I|L}SPKVHVP 6.2162 - 430 + 1 2.127 83291.8 1.0 3060 3441 6492 DOHH2_400M_050219_1,6503 DOHH2_400M_050219_1,6503,ISPKVKMAL False True ISPKVKMAL 35.881724 493.807177722454 726161.1875 6492.0 ENSG00000164754|ENST00000297338|RAD21 4.439958095550537 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6504 35.89 482.0 429170.0 25 0 56464.0 + 1728 ALPSHVVTM 9 132 477.7578409887116 953.5011290442231 2 477.7576782107353 MULTI CID FTMS 0 0 0 6492 172911.703125 0.2051331306510393 -1 0.1288032531738281 12 Unmodified _ALPSHVVTM_ ENSG00000062485|ENST00000351328|CS;ENST00000546621.5_1_12:56668606-56679804:-|nuORF;ENST00000547449.1_1_12:56676173-56676733:-|nuORF;ENST00000547912.1_1_12:56676173-56676410:-|nuORF 39.957323273325 0.0756908302845263 1 [{I|L}A][YR]VTTM 8 4 + 59.957 0.0 0.0 6.2881 6.2881 91.682 0.0 0.0 0.0 7.519262888766839 14.904630595263413 7.519262888766839 14.701140738196017 0 0.8807196863200843 2.0 0.8754223615525999 0.0 [{I|L}A][YR]VTTM;[{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}K{I|L}TM;[PS]HVVA{I|L}TM;[{I|L}A][YT]RVTM;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}AVAVTM;[HV]PSVA{I|L}TM;[HS]PVVA{I|L}TM;{[{M(Oxidation (M))|F}C]|[YS]}VAVA{I|L}TM;[{I|L}A][YR]V{M(Oxidation (M))|F}W;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}AVV[R{M(Oxidation (M))|F}] 6.2881;4.7463;4.6499;4.4721;4.3642;4.3595;4.2151;3.3629;3.3208;3.2905 -;-;-;-;-;-;-;-;-;- 1005 + 1 2.127 162690.7 1.0 3061 3441 6492 DOHH2_400M_050219_1,6504 DOHH2_400M_050219_1,6504,ALPSHVVTM True True ALPSHVVTM 35.890241 477.757678210735 4445888.5 6492.0 ENSG00000062485|ENST00000351328|CS;;ENST00000547912.1_1_12:56676173-56676410:-|nuORF;;ENST00000547449.1_1_12:56676173-56676733:-|nuORF;;ENST00000546621.5_1_12:56668606-56679804:-|nuORF 4.897717078526815 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6505 35.904 800.0 302900.0 25 0 66914.0 + 24555 MLDSHEELY 9 161 568.7497592077046 1135.4849654822092 2 568.7502319216728 MULTI CID FTMS 0 0 0 6492 169797.453125 1.0 0 0.0 13 Unmodified _MLDSHEELY_ ENSG00000197102|ENST00000360184|DYNC1H1 54.773552608820026 0.0299037012502309 1 M{I|L}D 3 6 50.203 0.0 0.0 4.4213 0.0 0.0 0.0 773.3132418268186 773.3132418268186 1.1209655692609743 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3252574989159953 0.0 + M{I|L}D 4.4213 + + 1790 + 1 2.127 183369.7 0.7400000095367432 3062 3441 6492 DOHH2_400M_050219_1,6505 DOHH2_400M_050219_1,6505,MLDSHEELY True True MLDSHEELY 35.904074 568.750231921673 1030859.875 6492.0 ENSG00000197102|ENST00000360184|DYNC1H1 6.786936283111572 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6506 35.909 243.0 285080.0 25 0 16658.0 + + -1 TDAAVSFAKD 10 123 533.7535297533959 0 533.7559692263603 PEAK CID FTMS 0 0 0 6492 174648.09375 1.0 0 0.0 14 Oxidation (M) _EEAAM(Oxidation (M))KLCR_ SLC25A5|p.C57Afs*85|1|0.6|ENSG00000005022|chrX:119469718-119469718|T/-|frameshift_variant;ENSG00000005022|ENST00000317881|SLC25A5 10.073929032068715 0.3114232490637051 1 AVS{M(Oxidation (M))|F}A 5 -1 33.443 0.0 0.0 3.1388 0.0 0.0 329.11657296711525 258.1102388971313 587.2268118642465 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 AVS{M(Oxidation (M))|F}A 3.1388 - 61 + 1 2.127 56631.7 1.0 3063 3441 6492 DOHH2_400M_050219_1,6506 DOHH2_400M_050219_1,6506,EEAAMKLCR False False TDAAVSFAKD 35.908626 533.75596922636 643930.3125 6492.0 SLC25A5|p.C57Afs*85|1|0.6|ENSG00000005022|chrX:119469718-119469718|T/-|frameshift_variant;;ENSG00000005022|ENST00000317881|SLC25A5 7.540522575378418 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6507 35.922 800.0 133120.0 25 0 8234.4 + + -1 GTDSTQTSGWQY 12 154 665.7808745951864 1329.5471962571728 2 665.7811157107353 MULTI CID FTMS 0 0 0 6492 153286.921875 1.0 0 0.0 15 Oxidation (M) _YM(Oxidation (M))PWVHGDFY_ ENST00000533707.1_1_11:47774435-47776097:-|nuORF;ENSG00000109920|ENST00000263773|FNBP4;nc|ENSG00000109920|Q8N3X1-2|FNBP4 10.823927491677226 0.6659270209832991 1 [WQ]GST[HQ]{I|L}{I|L} 9 -1 26.615 0.0 0.0 2.0018 0.0 0.0 0.0 276.01617505907933 276.01617505907933 3.784384089833736 0.0 0.0 0.0 0 0.0 0.958607314841775 0.25 0.9634679910804403 [WQ]GST[HQ]{I|L}{I|L} 2.0018 - 1797 1 2.127 85002.9 0.7400000095367432 3064 3441 6492 DOHH2_400M_050219_1,6507 DOHH2_400M_050219_1,6507,YMPWVHGDFY False False GTDSTQTSGWQY 35.922463 665.781115710735 700322.8125 6492.0 ENST00000533707.1_1_11:47774435-47776097:-|nuORF;;ENSG00000109920|ENST00000263773|FNBP4;;nc|ENSG00000109920|Q8N3X1-2|FNBP4 5.527322769165039 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6508 35.938 800.0 195250.0 25 0 15920.0 + 7887 ELNERVAAL 9 178 507.7823155477632 0 507.7821533083916 PEAK CID FTMS 0 0 0 6492 150889.234375 1.0 0 0.0 16 Unmodified _ELNERVAAL_ ENSG00000117724|ENST00000366955|CENPF 82.5293158979368 0.0120067423199408 1 PTY[RH]E 6 8 14.741 0.0 0.0 1.4544 0.0 0.0 145.0704771875201 82.06698023013905 227.1374574176592 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.6109243748081782 0.0 PTY[RH]E 1.4544 - 236 + 1 2.127 120430.0 0.5899999737739563 3065 3441 6492 DOHH2_400M_050219_1,6508 DOHH2_400M_050219_1,6508,ELNERVAAL True True ELNERVAAL 35.937749 507.782153308392 1645283.75 6492.0 ENSG00000117724|ENST00000366955|CENPF 6.388954957326253 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6509 35.942 207.0 341810.0 25 0 59463.0 + -1 KNMNELLKY 9 85 584.8047309381491 1167.594908943098 2 584.8051025271416 MULTI CID FTMS 0 0 0 6492 137983.296875 0.5877475084595437 -1 0.1288032531738281 17 Oxidation (M) _KNM(Oxidation (M))NELLKY_ REV__ENSG00000196072|ENST00000370372|BLOC1S2;REV__nc|ENSG00000196072|Q6QNY1-2|BLOC1S2 17.11289562659939 0.3734572693229295 1 [MN]KWW{I|L}KY 8 -1 + 45.891 0.0 0.0 3.9304 3.9304 76.952 0.0 0.0 0.0 6.532125137753432 6.020599913279625 6.020599913279625 6.020599913279625 0 0.9247425010840048 0.0 0.0 0.4247425010840047 [MN]KWW{I|L}KY;[MN]KWW{I|L}YK;Y[HT]{I|L}[KC]{I|L}KY;Y[HT]{I|L}[KC]{I|L}YK;[MN][VG]{I|L}[KC]{I|L}KY;[MN][VG]{I|L}[KC]{I|L}YK 3.9304;3.4147;3.3709;2.8553;2.5823;2.0666 -;-;-;-;-;- 165 + 1 2.127 59313.4 1.0 3066 3441 6492 DOHH2_400M_050219_1,6509 DOHH2_400M_050219_1,6509,KNMNELLKY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6510 35.945 180.0 382610.0 25 0 34568.0 + 33011 SENPTQSPW 9 119 523.2330117439388 1044.4514705546776 2 523.2333862185478 MULTI CID FTMS 0 0 0 6492 135865.59375 0.7101096115694469 -1 0.1288032531738281 18 Unmodified _SENPTQSPW_ ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 19.256988751693697 0.3154191944385105 1 EVD[NS]SPW 8 5 33.621 0.0 0.0 3.219 0.0 0.0 112.05768500955884 0.0 112.05768500955884 0.0 13.86668392401624 0.0 0.0 0 0.0 0.0 0.0 0.0 EVD[NS]SPW 3.219 - 426 + 1 2.127 57975.1 1.0 3067 3441 6492 DOHH2_400M_050219_1,6510 DOHH2_400M_050219_1,6510,SENPTQSPW False True SENPTQSPW 35.945184 523.233386218548 1414343.25 6492.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B;;nc|ENSG00000156970|O60566-2|BUB1B 3.3580804665883384 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6511 35.95 244.0 296600.0 25 0 19155.0 + 1337 AKGLMKSL 8 106 424.2573708787568 846.5001888243137 2 424.2569152712822 MULTI CID FTMS 0 0 0 6492 115700.9609375 0.6321818330679201 -1 0.1288032531738281 19 Unmodified _AKGLMKSL_ REV__ENSG00000203883|ENST00000340356|SOX18 24.020572477871973 0.5389365498350341 1 AGKM[K{I|L}]S{I|L} 8 -1 + 61.883 0.0 0.0 7.3105 7.3105 95.783 0.0 0.0 0.0 49.11917194612595 14.024174299985006 14.024174299985006 27.08674701179433 0 1.8098943791441968 0.619788758288394 0.3252574989159953 0.0 AGKM[K{I|L}]S{I|L};[AG]KM[K{I|L}]S{I|L};[KG]AM[K{I|L}]S{I|L};[KQ]M[K{I|L}]S{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Q[K{I|L}]S{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[KQ]S{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[AG][K{I|L}]S{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}S[KQ]{I|L} 7.3105;4.1106;3.5879;3.3944;3.1593;2.632;2.0571;1.4875 -;-;-;-;-;-;-;- 165 + 1 2.127 61315.8 1.0 3068 3441 6492 DOHH2_400M_050219_1,6511 DOHH2_400M_050219_1,6511,AKGLMKSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6512 35.951 56.0 1512900.0 25 0 163660.0 + 35544 STPTSFNLRP 10 79 560.29479889341 1118.5750448536198 2 560.2958862185478 MULTI CID FTMS 0 0 0 6492 114859.953125 0.0316450226878732 -2 0.2533760070800781 20 Unmodified _STPTSFNLRP_ REV__ENSG00000178921|ENST00000314666|PFAS 20.453626601364224 0.5043500229302764 1 MSTNG{I|L}RP 8 -1 61.892 0.0 0.0 5.5331 0.0 0.0 244.1422420852708 0.0 244.1422420852708 0.0 40.19245281301863 0.0 0.0 0 0.0 0.0 0.805462187404089 0.7742275032520141 MSTNG{I|L}RP 5.5331 - 245 + 1 2.127 69647.6 1.0 3069 3441 6492 DOHH2_400M_050219_1,6512 DOHH2_400M_050219_1,6512,STPTSFNLRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6514 35.956 38.0 1161200.0 25 0 72114.0 + 6330 DVKGRIYQL 9 79 546.3139078195369 1090.6132627058737 2 546.3144409060478 MULTI CID FTMS 0 0 0 6513 754304.1875 0.0708342798354527 2 -0.214263916015625 1 Unmodified _DVKGRIYQL_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000536090.1_1_12:6626539-6627126:+|nuORF;ENST00000542472.1_1_12:6626979-6631036:+|nuORF 19.256988751693697 0.3154191944385105 1 DVK 3 6 49.253 0.0 0.0 4.516 0.0 0.0 0.0 745.4030245416624 745.4030245416624 24.564812201025568 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 + DVK 4.516 + + 109 + 1 2.123 39926.6 1.0 3070 3442 6513 DOHH2_400M_050219_1,6514 DOHH2_400M_050219_1,6514,DVKGRIYQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6515 35.96 200.0 302070.0 25 0 20937.0 37170 TIDLFRGKAA 10 107 364.5456399002331 1090.6150903008993 3 364.5449706912041 MULTI CID FTMS 0 0 0 6513 92003.390625 0.0783429131334711 2 -0.214263916015625 2 Unmodified _TIDLFRGKAA_ ENSG00000122692|ENST00000397149|SMU1;nc|ENSG00000122692|Q2TAY7-2|SMU1 5.731851221503515 0.7001233259664787 1 Q 1 10 15.044 0.0 0.0 1.3794 0.0 0.0 345.1891392284368 614.3483980768186 959.5375373052556 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 Q 1.3794 - 44 + 1 2.123 55250.1 1.0 3071 3442 6513 DOHH2_400M_050219_1,6515 DOHH2_400M_050219_1,6515,TIDLFRGKAA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6516 35.961 69.0 749580.0 25 0 91019.0 + 21616 LPKTGTVSL 9 73 458.27905994592 914.54356695864 2 458.2790710330009 MULTI CID FTMS 0 0 0 6513 765510.1875 1.0 0 0.0 3 Unmodified _LPKTGTVSL_ ENSG00000169710|ENST00000306749|FASN 38.17557092003332 0.0854718145212029 1 {I|L}P 2 7 36.427 0.0 0.0 3.983 0.0 0.0 0.0 701.3848360650999 701.3848360650999 12.341532552839016 0.0 0.0 0.0 0 0.2614393726401688 1.5228787452803376 0.0 0.0 + {I|L}P 3.983 + + 47 + 1 2.123 47072.3 1.0 3072 3442 6513 DOHH2_400M_050219_1,6516 DOHH2_400M_050219_1,6516,LPKTGTVSL True True LPKTGTVSL 35.961461 458.279071033001 4150928.0 6513.0 ENSG00000169710|ENST00000306749|FASN 1.8566757639249163 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6517 35.964 113.0 676280.0 25 0 83773.0 + 15987 ITDPDPDIRY 10 76 602.7964874107504 1203.578421888301 2 602.7966186404228 MULTI CID FTMS 0 0 0 6513 512780.0625 0.3987564524382012 -1 0.1062393188476562 4 Unmodified _ITDPDPDIRY_ ENSG00000198793|ENST00000361445|MTOR 37.07464296494664 0.1884581770199685 1 {I|L}TDPD[DP]{I|L}[YR] 10 0 + 70.01 0.0 0.0 5.8168 5.8168 77.652 0.0 0.0 0.0 18.661968799114845 0.9691001300805624 0.9691001300805624 0.9691001300805624 0 0.7614393726401688 2.0 0.0 0.0 + + {I|L}TDPD[DP]{I|L}[YR];{I|L}TDPD[DP]Y[R{I|L}];{I|L}TDPDY[DP][R{I|L}];{I|L}TDPDY{[RE]|[WV]}[VP];{I|L}TDPD[DP][HV][VP];{[ES]|[DT]|[{I|L}C]}{I|L}{[VA]|[{I|L}G]}YDPD[VP] 5.8168;5.7363;5.2361;5.1041;4.8429;2.346 +;-;-;-;-;- + 213 + 1 2.123 60180.9 1.0 3073 3442 6513 DOHH2_400M_050219_1,6517 DOHH2_400M_050219_1,6517,ITDPDPDIRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6518 35.966 97.0 440620.0 25 0 40580.0 + 43502 WWWWIWWQWW 10 55 874.9042007258124 1747.7938485184247 2 875.4033080935478 MULTI CID FTMS 0 0 0 6513 499693.5 0.1923095573743804 8 -0.8611717224121094 5 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 1 DAD{I|L}NP{[QN]|[E{I|L}]|[KN]} 8 8 49.641 0.0 0.0 2.8402 0.0 0.0 862.4287996667181 0.0 862.4287996667181 0.0 31.78456906244314 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 DAD{I|L}NP{[QN]|[E{I|L}]|[KN]} 2.8402 - 93 1 2.123 35991.8 1.0 3074 3442 6513 DOHH2_400M_050219_1,6518 DOHH2_400M_050219_1,6518,WWWWIWWQWW False True False False splicing PXD020620_cell_line DOHH2_400M_050219_1 6519 35.969 131.0 424730.0 25 0 70169.0 + 10927 GAKRHSGL 8 94 413.2388644783535 824.463176023507 2 413.2385436892509 MULTI CID FTMS 0 0 0 6513 301270.78125 0.2266794234801863 -15 1.7325592041015625 6 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 2.302733041254933 0.8103549651115762 1 {M(Oxidation (M))|F} 1 -1 10.837 0.0 0.0 1.3145 0.0 0.0 659.3837520506539 0.0 659.3837520506539 0.0 10.74881160166666 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3145 - 5 + 1 2.123 48963.9 1.0 3075 3442 6513 DOHH2_400M_050219_1,6519 DOHH2_400M_050219_1,6519,GAKRHSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6520 35.973 229.0 451840.0 25 0 108930.0 19035 LDLPLVWK 8 88 492.2982585735076 982.5819642138152 2 492.2979308962822 MULTI CID FTMS 0 0 0 6513 148403.140625 0.5384671947663838 2 -0.214263916015625 7 Unmodified _LDLPLVWK_ ENST00000522782.5_1_5:153429160-153429226:+|nuORF 12.531546534597751 0.7257836412119636 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}P 4 4 36.682 0.0 0.0 3.7333 0.0 0.0 0.0 541.3142794244749 541.3142794244749 22.078343878162343 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}{I|L}P 3.7333 + + 39 + 1 2.123 85006.9 1.0 3076 3442 6513 DOHH2_400M_050219_1,6520 DOHH2_400M_050219_1,6520,LDLPLVWK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6521 35.987 800.0 136800.0 25 0 8769.9 + 8241 ETDFGGDYGGTQY 13 151 705.2785039631588 1408.5424549931174 2 705.2783080935478 MULTI CID FTMS 0 0 0 6513 122362.4765625 0.9168025953132684 -1 0.1062393188476562 8 Unmodified _EQDFSYFFPDD_ ENST00000593636.1_1_19:50321571-50322554:+|nuORF;ENSG00000104973|ENST00000312865|MED25;nc|ENSG00000104973|Q71SY5-4|MED25;nc|ENSG00000104973|Q71SY5-5|MED25 13.042465956692816 0.7638483625850725 1 [DP]D{M(Oxidation (M))|F}GGD[HT]G 10 9 41.184 0.0 0.0 2.9239 0.0 0.0 0.0 407.1552839328237 407.1552839328237 22.86877106900284 0.0 0.0 0.0 0 0.3252574989159953 1.0457574905606752 1.7051120522087029 0.0 [DP]D{M(Oxidation (M))|F}GGD[HT]G 2.9239 - 4750 1 2.123 78284.6 0.6499999761581421 3077 3442 6513 DOHH2_400M_050219_1,6521 DOHH2_400M_050219_1,6521,EQDFSYFFPDD False False ETDFGGDYGGTQY 35.986777 705.278308093548 1216341.125 6513.0 ENST00000593636.1_1_19:50321571-50322554:+|nuORF;;ENSG00000104973|ENST00000312865|MED25;;nc|ENSG00000104973|Q71SY5-4|MED25;;nc|ENSG00000104973|Q71SY5-5|MED25 7.620502630869548 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6522 35.995 486.0 128860.0 25 0 11592.0 + 5345 DLHGWEELI 9 103 556.2745072131323 1110.5344614930646 2 556.2697631716728 MULTI CID FTMS 0 0 0 6513 95451.734375 0.0319463827194127 11 -1.2234420776367188 9 Unmodified _DLHGWEELI_ REV__ENSG00000196652|ENST00000326775|ZKSCAN5 15.847184025352805 0.4077185912009129 1 DMKRRA{I|L} 7 -1 51.48 0.0 0.0 4.6356 0.0 0.0 0.0 237.0013216608032 237.0013216608032 33.25339205855041 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 DMKRRA{I|L} 4.6356 - 102 + 1 2.123 56389.2 1.0 3078 3442 6513 DOHH2_400M_050219_1,6522 DOHH2_400M_050219_1,6522,DLHGWEELI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6523 36.001 308.0 187650.0 25 0 10832.0 + 7230 EERLTWHSY 9 98 407.5281806675776 1219.5627126029326 3 407.5280334353447 MULTI CID FTMS 0 0 0 6513 80539.3046875 0.8634756831270708 -1 0.1062393188476562 10 Unmodified _EERLTWHSY_ ENSG00000108468|ENST00000225603|CBX1 11.494710602746466 0.5255349189887087 1 WHSY 4 5 18.153 0.0 0.0 1.4885 0.0 0.0 628.3177918039077 0.0 628.3177918039077 0.0 7.86496782055967 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.0 + WHSY 1.4885 + + 82 + 1 2.123 50507.0 1.0 3079 3442 6513 DOHH2_400M_050219_1,6523 DOHH2_400M_050219_1,6523,EERLTWHSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6524 36.004 142.0 385200.0 25 0 62228.0 + 11886 GLVGKPID 8 92 399.73859184063866 797.4626307480773 2 399.7381774783134 MULTI CID FTMS 0 0 0 6513 378241.53125 0.744804848330302 -1 0.1062393188476562 11 Unmodified _GLVGKPID_ REV__LYST|p.V2190I|1|0.27|ENSG00000143669|chr1:235759285-235759285|C/T|missense_variant 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.123 47318.8 1.0 3080 3442 6513 DOHH2_400M_050219_1,6524 DOHH2_400M_050219_1,6524,GLVGKPID False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6525 36.006 130.0 454690.0 25 0 36099.0 + 502 AEGTFPGKI 9 95 460.2484842158184 918.4824154984368 2 460.2346374392509 MULTI CID FTMS 0 0 0 -1 0 12 Unmodified _AEGTFPGKI_ ENSG00000126267|ENST00000649813|COX6B1 17.11289562659939 0.3734572693229295 1 [{M(Oxidation (M))|F}V]A{[RE]|[WV]}GK{I|L} 8 6 + 16.643 0.0 0.0 1.812 1.812 66.612 0.0 0.0 0.0 -3.908103009885764 6.185625271001173 -3.908103009885764 0.8631095373108622 0 0.0 0.0 0.0 0.4247425010840047 [{M(Oxidation (M))|F}V]A{[RE]|[WV]}GK{I|L};{[CP]|[EA]}GT{M(Oxidation (M))|F}PGK{I|L};[{M(Oxidation (M))|F}V]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}GK{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[K{I|L}]{[NV]|[RG]}{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]A{[RE]|[WV]}[KA]V;[{M(Oxidation (M))|F}V]{I|L}{[WN]|[YH]}K{I|L};{[CP]|[EA]}GT{M(Oxidation (M))|F}P[KA]V;[{M(Oxidation (M))|F}V]{[NV]|[RG]}{[CP]|[EA]}K{I|L};[{M(Oxidation (M))|F}V]{[NV]|[RG]}[WR]V;[{M(Oxidation (M))|F}V]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[KA]V 1.812;1.7181;1.4052;0.87643;0.7731;0.68091;0.67913;0.41265;0.38958;0.36622 -;+;-;-;-;-;-;-;-;- + 105 + 1 2.123 50268.4 1.0 3081 3442 6513 DOHH2_400M_050219_1,6525 DOHH2_400M_050219_1,6525,AEGTFPGKI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6526 36.014 378.0 244520.0 25 0 31751.0 + 14154 IDAGRQVL 8 145 436.253694086704 870.492835240208 2 436.2535888552666 MULTI CID FTMS 0 0 0 6513 169226.0625 1.0 0 0.0 13 Unmodified _IDAGRQVL_ REV__ENSG00000089091|ENST00000699568|DZANK1;REV__nc|ENSG00000089091|Q9NVP4-2|DZANK1;REV__nc|ENSG00000089091|Q9NVP4-4|DZANK1;REV__nc|ENSG00000089091|Q9NVP4-5|DZANK1;REV__nc|ENSG00000089091|Q9NVP4|DZANK1 16.942295170755138 0.6606234159769251 1 {NN|[MP]|[D{I|L}]|[EV]}A 3 -1 34.705 0.0 0.0 3.9868 0.0 0.0 0.0 568.3223005898767 568.3223005898767 19.22044985140652 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}A 3.9868 + + 63 + 1 2.123 75504.7 1.0 3082 3442 6513 DOHH2_400M_050219_1,6526 DOHH2_400M_050219_1,6526,IDAGRQVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6527 36.025 624.0 168410.0 25 0 21086.0 28086 PPILSTKS 8 137 421.7516385099368 841.4887240866735 2 421.7510864138603 MULTI CID FTMS 0 0 0 6513 154013.796875 0.2998813360001397 -15 1.7325592041015625 14 Unmodified _PPILSTKS_ ENST00000564902.5_1_15:30916943-30922907:+|nuORF 5.230669730166228 0.792582437072536 1 Y 1 8 11.783 0.0 0.0 1.4002 0.0 0.0 660.4142897378439 0.0 660.4142897378439 0.0 0.6734928694872799 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4002 - 14 + 1 2.123 84499.8 1.0 3083 3442 6513 DOHH2_400M_050219_1,6527 DOHH2_400M_050219_1,6527,PPILSTKS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6528 36.039 800.0 58120.0 25 0 14068.0 -1 0 35 1167.4692592592914 3499.3859483780743 3 1168.138720691204 MULTI CID FTMS 0 0 0 6513 118606.0078125 1.0 0 0.0 15 1 G 1 -1 6.9897 0.0 0.0 0.19974 0.0 0.0 2275.8419986587005 1163.5132237244493 3439.35522238315 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19974 - 1 + 1 2.123 42646.9 0.3700000047683716 3084 3442 6513 DOHH2_400M_050219_1,6528 DOHH2_400M_050219_1,6528, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6529 36.049 561.0 253280.0 25 0 12668.0 -1 0 189 364.1958853482813 363.1886088816813 1 364.1963683962822 MULTI CID FTMS 0 0 0 6513 125401.3671875 1.0 0 0.0 16 1 {M(Oxidation (M))|F} 1 -1 11.99 0.0 0.0 3.3012 0.0 0.0 198.1091543912501 0.0 198.1091543912501 0.0 0.7306401783911909 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 3.3012 - 24 + 1 2.123 113808.0 1.0 3085 3442 6513 DOHH2_400M_050219_1,6529 DOHH2_400M_050219_1,6529, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6530 36.056 325.0 151970.0 25 0 19813.0 + + 42453 DVLDKASSL 9 78 474.2542524260916 0 474.2556335330009 PEAK CID FTMS 0 0 0 6513 108960.1171875 0.8717024031716781 5 -0.5711097717285156 17 Unmodified _VTGESIASAL_ nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1 14.838274106304384 0.3381107837965078 1 S 1 -1 9.877 0.0 0.0 1.0435 0.0 0.0 386.18701940120826 470.2578376520089 856.4448570532172 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 S 1.0435 + + 12 + 1 2.123 44859.6 1.0 3086 3442 6513 DOHH2_400M_050219_1,6530 DOHH2_400M_050219_1,6530,VTGESIASAL False False DVLDKASSL 36.056086 474.255633533001 951847.5625 6513.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 4.335234562555949 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6532 36.061 17.0 2648700.0 25 0 362090.0 + 26387 NTDHQTQLLY 10 67 616.7983944388789 1231.5822359445576 2 616.7987548708916 MULTI CID FTMS 0 0 0 6531 3139202.0 0.5771827443576847 1 -0.1094322204589843 1 Unmodified _NTDHQTQLLY_ ENSG00000051180|ENST00000267868|RAD51;nc|ENSG00000051180|Q06609-2|RAD51;nc|ENSG00000051180|Q06609-3|RAD51;nc|ENSG00000051180|Q06609-4|RAD51 43.77239144664712 0.1177314611616471 1 QTQ{I|L}{I|L}Y 6 4 54.698 0.0 0.0 4.4413 0.0 0.0 467.1772022931656 0.0 467.1772022931656 0.0 35.21697743678416 0.0 0.0 0 0.8935078169319297 0.0 1.1861818737241734 0.8494850021680094 + QTQ{I|L}{I|L}Y 4.4413 + + 44 1 2.123 42252.9 1.0 3087 3443 6531 DOHH2_400M_050219_1,6532 DOHH2_400M_050219_1,6532,NTDHQTQLLY True True NTDHQTQLLY 36.060637 616.798754870892 69629400.0 6531.0 nc|ENSG00000051180|Q06609-3|RAD51;;nc|ENSG00000051180|Q06609-4|RAD51;;nc|ENSG00000051180|Q06609-2|RAD51;;ENSG00000051180|ENST00000267868|RAD51 6.6941172281901045 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6533 36.062 57.0 1350000.0 25 0 262530.0 + 28042 PPAARGRG 8 85 391.2250775758323 780.4356022184646 2 391.2248412966728 MULTI CID FTMS 0 0 0 6531 1290621.75 1.0 0 0.0 2 Unmodified _PPAARGRG_ REV__nc|ENSG00000076554|P55327-3|TPD52 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.123 64986.6 1.0 3088 3443 6531 DOHH2_400M_050219_1,6533 DOHH2_400M_050219_1,6533,PPAARGRG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6534 36.064 96.0 673380.0 25 0 54018.0 + 13772 HSDQQVFEY 9 88 576.7514886074251 1151.4884242816502 2 576.7516357302666 MULTI CID FTMS 0 0 0 6531 632119.5 0.4565492180499662 -1 0.1048316955566406 3 Unmodified _HSDQQVFEY_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 49.55428908609986 0.0413471690215031 1 [HS]DQQV{M(Oxidation (M))|F}EY 9 0 + 61.978 0.0 0.0 5.3824 5.3824 84.492 0.0 0.0 0.0 5.602802969692746 48.79039059593687 5.602802969692746 9.163865622122673 0 0.805462187404089 0.0 0.3807196863200844 0.805462187404089 + + [HS]DQQV{M(Oxidation (M))|F}EY;{[QN]|[E{I|L}]|[KN]}{[ES]|[DT]|[{I|L}C]}HV{M(Oxidation (M))|F}EY;[HS]DQ[AG]V{M(Oxidation (M))|F}EY;[HS]D[AG]QV{M(Oxidation (M))|F}EY;[{M(Oxidation (M))|F}V][DP]HV{M(Oxidation (M))|F}EY;[HS]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HV{M(Oxidation (M))|F}EY;[HS]D[AG][AG]V{M(Oxidation (M))|F}EY;[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E][YR]EY 5.3824;4.5866;4.5827;4.5827;3.6218;3.4689;3.0874;1.9919 +;-;-;-;-;-;-;- + 273 1 2.123 55128.2 1.0 3089 3443 6531 DOHH2_400M_050219_1,6534 DOHH2_400M_050219_1,6534,HSDQQVFEY True True HSDQQVFEY 36.064152 576.751635730267 7885577.5 6531.0 nc|ENSG00000141076|Q969X6-3|UTP4;;ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 8.314208825429281 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6535 36.066 77.0 636360.0 25 0 50874.0 + 41896 VQDLLDFKD 9 82 546.7817782238021 1091.549003514404 2 546.7823974490166 MULTI CID FTMS 0 0 0 6531 447257.21875 0.7365159344647254 1 -0.1094322204589843 4 Unmodified _VQDLLDFKD_ ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A 21.53697664764585 0.2571576504437394 1 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}D 6 3 35.635 0.0 0.0 3.2646 0.0 0.0 0.0 405.1757484697354 405.1757484697354 20.76483730104272 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.2742275032520141 + {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}D 3.2646 + + 189 1 2.123 43600.5 1.0 3090 3443 6531 DOHH2_400M_050219_1,6535 DOHH2_400M_050219_1,6535,VQDLLDFKD False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6536 36.069 147.0 582380.0 25 0 79756.0 19374 LERDETHF 8 100 523.7490792196367 1045.4836055060732 2 523.7495605349541 MULTI CID FTMS 0 0 0 6531 411188.375 1.0 0 0.0 5 Unmodified _LERDETHF_ ENSG00000167395|ENST00000300850|ZNF646;nc|ENSG00000167395|O15015-1|ZNF646 26.88365393820708 0.4786498634179528 1 {I|L}EVDW 5 5 70.701 0.0 0.0 6.7625 0.0 0.0 0.0 400.15986047916255 400.15986047916255 53.91833858839183 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8494850021680094 0.0 {I|L}EVDW 6.7625 - 726 + 1 2.123 72182.8 1.0 3091 3443 6531 DOHH2_400M_050219_1,6536 DOHH2_400M_050219_1,6536,LERDETHF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6537 36.072 161.0 464330.0 25 0 57107.0 + 36780 TEELAYLK 8 91 483.760646435444 965.506739937688 2 483.7608215212822 MULTI CID FTMS 0 0 0 6531 324156.6875 0.6489743553809555 -1 0.1048316955566406 6 Unmodified _TEELAYLK_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 64.23631603340823 0.116217441302575 1 {[ET]|[MV]}E{I|L}AY{I|L}K 8 0 + 60.17 0.0 0.0 6.232 6.232 91.295 0.0 0.0 0.0 6.989700043360188 13.76332724166332 6.989700043360188 13.76332724166332 0 0.8494850021680094 0.0 0.4247425010840047 0.2302046884880938 + + {[ET]|[MV]}E{I|L}AY{I|L}K;{[ET]|[MV]}E{I|L}AYK{I|L};{[ET]|[MV]}E{I|L}A[K{I|L}]Y;{[QN]|[E{I|L}]|[KN]}AY[K{I|L}]{[ET]|[MV]};{[QN]|[E{I|L}]|[KN]}AY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[{I|L}V];{[QN]|[E{I|L}]|[KN]}A{I|L}[YK]{[ET]|[MV]} 6.232;4.8065;3.9511;1.6311;1.4487;1.1608 +;-;-;-;-;- + 140 + 1 2.123 61756.1 1.0 3092 3443 6531 DOHH2_400M_050219_1,6537 DOHH2_400M_050219_1,6537,TEELAYLK True True TEELAYLK 36.072041 483.760821521282 2771104.25 6531.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 5.667341073354085 2.0 True 8.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 6538 36.086 800.0 198950.0 25 0 14514.0 + 45383 YTADGKEVLEY 11 162 644.3086494729744 1286.6027460127486 2 644.3094360232353 MULTI CID FTMS 0 0 0 6531 178569.921875 0.1087804919186725 2 -0.2294960021972656 7 Unmodified _YTADGKEVLEY_ ENSG00000196655|ENST00000533632|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889791-118894106:+|nuORF 62.86856922530385 0.057503257068159 1 YTAD 4 7 55.176 0.0 0.0 4.2885 0.0 0.0 0.0 833.4062736362847 833.4062736362847 23.652900144236632 0.0 0.0 0.0 0 0.4386218330464625 2.0 0.4247425010840047 0.0 + YTAD 4.2885 + + 4429 + 1 2.123 119541.1 0.7900000214576721 3093 3443 6531 DOHH2_400M_050219_1,6538 DOHH2_400M_050219_1,6538,YTADGKEVLEY True True YTADGKEVLEY 36.085879 644.309436023235 22353768.0 6531.0 ENSG00000196655|ENST00000533632|TRAPPC4;;ENST00000531290.5_1_11:118889791-118894106:+|nuORF;;ENST00000447216.2_1_11:118889505-118891019:+|nuORF 7.309538205464681 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6539 36.094 459.0 311840.0 25 0 14720.0 + 43338 WMHKVPASL 9 151 534.7869467198337 1067.5593405064674 2 534.7866088747978 MULTI CID FTMS 0 0 0 6531 176122.96875 1.0 0 0.0 8 Unmodified _WMHKVPASL_ ENSG00000105369|ENST00000221972|CD79A;nc|ENSG00000105369|P11912-2|CD79A 96.11092074494114 0.0124975504059861 1 WMHKV[PA]S{I|L} 9 0 + 92.964 0.0 0.0 8.7081 8.7081 90.792 0.0 0.0 0.0 61.46642580832375 12.98332479720628 12.98332479720628 7.231423671422917 0 2.301203852579394 2.0 0.6307196863200843 0.0 + + WMHKV[PA]S{I|L};WMHVK[PA]S{I|L};[WM]HKVS[PA]{I|L};[WM]HKVS{I|L}[PA];WMHKV[{I|L}T]GP;W{I|L}SVK[YC(Carbamidomethyl (C))]{I|L};W{I|L}SVK{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y;WMHVK[{I|L}T]GP;[WM]HK[PA][VS]{I|L};WMHK[K{I|L}]EP 8.7081;8.0307;7.2997;6.7754;5.7902;5.6788;5.2109;5.1128;4.8844;4.5753 +;-;-;-;-;-;-;-;-;- + 987 + 1 2.123 112420.7 1.0 3094 3443 6531 DOHH2_400M_050219_1,6539 DOHH2_400M_050219_1,6539,WMHKVPASL True True WMHKVPASL 36.094025 534.786608874798 1091346.875 6531.0 nc|ENSG00000105369|P11912-2|CD79A;;ENSG00000105369|ENST00000221972|CD79A 6.224530220031738 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6540 36.099 252.0 252020.0 25 0 17434.0 + -1 EIEMLDCAEH 10 99 631.7537910371411 1261.4930291410822 2 631.7535278201103 MULTI CID FTMS 0 0 0 6531 161999.203125 1.0 0 0.0 9 Carbamidomethyl (C),Oxidation (M) _EIEM(Oxidation (M))LDC(Carbamidomethyl (C))AEH_ REV__ENST00000451892.1_1_1:240307909-240308467:-|nuORF 3.5964929083625545 0.7100006075494749 1 V 1 -1 5.4846 0.0 0.0 0.43477 0.0 0.0 874.3124393967447 285.0885103815063 1159.400949778251 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.43477 - 41 + 1 2.123 52914.7 1.0 3095 3443 6531 DOHH2_400M_050219_1,6540 DOHH2_400M_050219_1,6540,EIEMLDCAEH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6541 36.106 401.0 425810.0 25 0 68955.0 + 5114 DIDTRSEFY 9 135 573.2594714049017 1144.5043898766032 2 573.2598754763603 MULTI CID FTMS 0 0 0 6531 161678.328125 0.1684947626876849 -1 0.1048316955566406 10 Unmodified _DIDTRSEFY_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 59.36838082759317 0.0264317782606298 1 {NN|[MP]|[D{I|L}]|[EV]}DNV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}Y 9 3 + 65.429 0.0 0.0 5.7168 5.7168 76.149 0.0 0.0 0.0 0.1709779556855295 0.1709779556855295 0.1709779556855295 0.1709779556855295 0 1.6549471895720984 2.0 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}DNV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}DTGSVE{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}DTGVSE{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}{[SA]|[TG]}DSVE{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}[KC]EVE{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}DNVDTAPW;{NN|[MP]|[D{I|L}]|[EV]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}SVE{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}{[SA]|[TG]}DVSE{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}DGGV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}DTGS{M(Oxidation (M))|F}D{I|L}Y 5.7168;5.7018;5.4895;5.1618;5.0926;5.0413;5.0079;4.9494;4.9122;4.8504 -;-;-;-;-;-;-;-;-;- 3837 + 1 2.123 130901.4 1.0 3096 3443 6531 DOHH2_400M_050219_1,6541 DOHH2_400M_050219_1,6541,DIDTRSEFY True True DIDTRSEFY 36.105921 573.25987547636 5322788.0 6531.0 ENSG00000138071|ENST00000260641|ACTR2;;nc|ENSG00000138071|P61160-2|ACTR2 6.600216070810954 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6542 36.12 800.0 182290.0 25 0 30945.0 -1 0 84 674.6919106989226 2021.053902696968 3 675.0258666872978 MULTI CID FTMS 0 0 0 6531 140115.40625 1.0 0 0.0 11 1 KPTGAR 6 -1 44.131 0.0 0.0 2.1836 0.0 0.0 1024.4800431669898 383.19333494827583 1407.6733781152657 0.0 0.0 0.0 0.0 0 1.0 0.0 0.75 0.0 KPTGAR 2.1836 - 263 + 1 2.123 115563.8 0.699999988079071 3097 3443 6531 DOHH2_400M_050219_1,6542 DOHH2_400M_050219_1,6542, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6543 36.135 800.0 288160.0 25 0 20999.0 + 5357 DLINKKVGI 9 184 500.31373369449153 998.6129144557832 2 500.3140136599541 MULTI CID FTMS 0 0 0 6531 101435.21875 0.4499975115104771 -1 0.1048316955566406 12 Unmodified _DLINKKVGI_ ENSG00000116120|ENST00000281828|FARSB;nc|ENSG00000116120|Q9NSD9-2|FARSB 81.89019881105858 0.0170587746866453 1 D{I|L}{I|L}NKKVG{I|L} 9 0 + 98.414 0.0 0.0 9.8551 9.8551 86.683 0.0 0.0 0.0 56.11510116613701 12.05136871872881 12.05136871872881 2.6686071069409536 0 1.7302046884880935 2.0 0.0 0.6989700043360187 + + D{I|L}{I|L}NKKVG{I|L};{I|L}D{I|L}NKKVG{I|L};D{I|L}{I|L}GGKKVG{I|L};{I|L}D{I|L}GGKKVG{I|L};D{I|L}{I|L}NKKGV{I|L};{I|L}D{I|L}NKKGV{I|L};D{I|L}{I|L}GGKKGV{I|L};{I|L}D{I|L}GGKKGV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[K{I|L}]G[KA]AA;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[K{I|L}][KQ]AA 9.8551;9.5878;8.933;8.6657;8.5517;8.2845;7.6296;7.3624;3.3366;3.1603 +;-;-;-;-;-;-;-;-;- + 1993 + 1 2.123 173675.6 0.9700000286102296 3098 3443 6531 DOHH2_400M_050219_1,6543 DOHH2_400M_050219_1,6543,DLINKKVGI True True DLINKKVGI 36.134748 500.314013659954 1256768.75 6531.0 ENSG00000116120|ENST00000281828|FARSB;;nc|ENSG00000116120|Q9NSD9-2|FARSB 4.83178448677063 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6544 36.137 84.0 502550.0 25 0 41620.0 -1 LSFPEIMAV 9 76 511.7668767157356 0 511.7662841677666 PEAK CID FTMS 0 0 0 6531 223720.90625 0.7775927918635838 -1 0.1048316955566406 13 Oxidation (M) _LSFPEIM(Oxidation (M))AV_ ENSG00000137474|ENST00000409709|MYO7A;ENST00000481328.7_1_11:76905078-76923312:+|nuORF;nc|ENSG00000137474|Q13402-2|MYO7A;nc|ENSG00000137474|Q13402-5|MYO7A;nc|ENSG00000137474|Q13402-6|MYO7A;nc|ENSG00000137474|Q13402-7|MYO7A;nc|ENSG00000137474|Q13402-8|MYO7A 30.22481116460888 0.1097735003385577 1 CA 2 -1 12.251 0.0 0.0 1.1992 0.0 0.0 730.3975707148713 114.05658899478748 844.4541597096588 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 CA 1.1992 - 58 + 1 2.123 39365.5 1.0 3099 3443 6531 DOHH2_400M_050219_1,6544 DOHH2_400M_050219_1,6544,LSFPEIMAV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6545 36.15 800.0 110090.0 25 0 9091.6 -1 0 102 881.9132660489507 1761.8119791647014 2 881.9199096560478 MULTI CID FTMS 0 0 0 6531 192462.90625 0.170726347764523 6 -0.630889892578125 14 1 [NP]{I|L}NEP[TP]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 73.489 0.0 0.0 4.1712 4.1712 74.592 0.0 0.0 0.0 4.164317917986224 44.34598954116999 4.164317917986224 3.0102999566398125 0 0.805462187404089 0.0 0.2742275032520141 0.6139829889124311 [NP]{I|L}NEP[TP]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NEP[TP]AQD{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAE[NG][R{M(Oxidation (M))|F}]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA{[QG]|[NA]}D[R{M(Oxidation (M))|F}]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[KG]D[R{M(Oxidation (M))|F}]{I|L}Q;[NP]{I|L}NEP[TP]AE{I|L}NNP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}DQAE[NG][R{M(Oxidation (M))|F}]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}DQA[KG]D[R{M(Oxidation (M))|F}]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}DQA{[QG]|[NA]}D[R{M(Oxidation (M))|F}]{I|L}Q;[NP]{I|L}NEP[TP]AEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.1712;4.0004;3.9149;3.9149;3.9149;3.7843;3.744;3.744;3.744;3.6596 -;-;-;-;-;-;-;-;-;- 4831 1 2.123 64072.3 0.6299999952316284 3100 3443 6531 DOHH2_400M_050219_1,6545 DOHH2_400M_050219_1,6545, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6546 36.166 800.0 133440.0 25 0 9533.4 -1 0 112 909.4150855233464 1816.8156181134923 2 909.4158203005792 MULTI CID FTMS 0 0 0 6531 151285.921875 1.0 0 0.0 15 1 [NP]{I|L}N{M(Oxidation (M))|F}{I|L}[NP]HAN{I|L}NP 14 -1 67.776 0.0 0.0 3.7305 0.0 0.0 0.0 258.05376689320013 258.05376689320013 48.44537510741424 0.0 0.0 0.0 0 0.8807196863200843 0.958607314841775 0.0 0.7302046884880937 [NP]{I|L}N{M(Oxidation (M))|F}{I|L}[NP]HAN{I|L}NP 3.7305 - 1966 1 2.123 75935.6 0.550000011920929 3101 3443 6531 DOHH2_400M_050219_1,6546 DOHH2_400M_050219_1,6546, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6548 36.17 2.2 19345000.0 25 0 1236900.0 + 2685 ATEDPWKTNY 10 68 612.7803233429337 1223.5460937526673 2 612.7814208865166 MULTI CID FTMS 0 0 0 6547 24361352.0 0.9034268758436244 1 -0.1200637817382812 1 Unmodified _ATEDPWKTNY_ ENSG00000139684|ENST00000378720|ESD 53.40400417844725 0.0601721406801337 1 [TA]EDPWKTNY 10 0 [TA]E + + 46.643 25.647 8.5169 3.8121 3.8121 52.623 0.0 0.0 0.0 0.0 3.947340481202062 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.6861818737241735 + + [TA]EDPWKTNY 3.8121 + + 259 + 1 2.118 39269.1 1.0 3102 3444 6547 DOHH2_400M_050219_1,6548 DOHH2_400M_050219_1,6548,ATEDPWKTNY True True ATEDPWKTNY 36.170068 612.781420886517 584279856.0 6547.0 ENSG00000139684|ENST00000378720|ESD 9.23080571492513 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6549 36.173 148.0 529170.0 25 0 47379.0 + 8698 EVKPHALEL 9 117 518.2956685536594 1034.5767841741188 2 518.2958862185478 MULTI CID FTMS 0 0 0 6547 146862.0 0.1483674005567869 2 -0.2289810180664062 2 Unmodified _EVKPHALEL_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 19.256988751693697 0.3154191944385105 1 {[QN]|[E{I|L}]|[KN]}[K{I|L}]TADV{M(Oxidation (M))|F} 9 6 + 25.172 0.0 0.0 2.4331 2.4331 70.927 0.0 0.0 0.0 3.238096091464847 1.8076202217328896 1.8076202217328896 3.467874862246564 0 0.1069758080123702 0.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[K{I|L}]TADV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[K{I|L}]TWV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[K{I|L}]C(Carbamidomethyl (C)){I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[YT][RP][RP]V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[K{I|L}][CG]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}T][R{I|L}]TADV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[K{I|L}]T[DG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}[{I|L}T]{[SA]|[TG]}A{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}[WH][R{I|L}][VP];{[TV]|[{I|L}S]}[{I|L}T]{[VA]|[{I|L}G]}ADV{M(Oxidation (M))|F} 2.4331;2.0979;1.8243;1.3852;0.92906;0.71407;0.63809;0.17685;0.17082;0.15948 -;-;-;-;-;-;-;-;-;- 396 1 2.118 62381.4 1.0 3103 3444 6547 DOHH2_400M_050219_1,6549 DOHH2_400M_050219_1,6549,EVKPHALEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6550 36.174 48.0 896320.0 25 0 88613.0 + 22940 LSEPSSLQY 9 79 512.2525529328153 1022.4905529324308 2 512.2527343630791 MULTI CID FTMS 0 0 0 6547 886979.5 0.6859183204743231 -1 0.1094322204589843 3 Unmodified _LSEPSSLQY_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 44.40701690623563 0.0526327925666318 1 {[TV]|[{I|L}S]}E[RD]{I|L}QY 8 3 {[TV]|[{I|L}S]}E[RD]{I|L} + + 22.474 22.183 3.1097 2.198 2.198 49.065 0.0 0.0 0.0 0.0 -6.69855913805776 -6.69855913805776 0.0 0 0.0 0.0 0.0 0.5 {[TV]|[{I|L}S]}E[RD]{I|L}QY 2.198 - 167 + 1 2.118 42939.0 1.0 3104 3444 6547 DOHH2_400M_050219_1,6550 DOHH2_400M_050219_1,6550,LSEPSSLQY True True LSEPSSLQY 36.174318 512.252734363079 8552244.0 6547.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 5.262685457865397 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6551 36.176 92.0 1222000.0 25 0 121220.0 + 20529 LLLRRTQLL 9 82 375.9203013786506 1124.739074736152 3 375.9203369021416 MULTI CID FTMS 0 0 0 6547 707497.3125 0.3047627983361826 -1 0.1094322204589843 4 Unmodified _LLLRRTQLL_ ENSG00000255181|ENST00000542437|CCDC166 23.78978130925829 0.2284941198415988 1 {I|L}{I|L}[KQ]{I|L}WV{I|L}{I|L} 9 5 + 44.319 0.0 0.0 3.9404 3.9404 85.719 0.0 0.0 0.0 9.638787285696964 34.882287586051106 9.638787285696964 44.31926257837823 0 0.9247425010840048 1.5228787452803376 0.0 0.0 {I|L}{I|L}[KQ]{I|L}WV{I|L}{I|L} 3.9404 - 65 1 2.118 96124.5 1.0 3105 3444 6547 DOHH2_400M_050219_1,6551 DOHH2_400M_050219_1,6551,LLLRRTQLL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6552 36.178 90.0 735960.0 25 0 67538.0 + 7719 ELDDTLKY 8 86 498.7479722313727 995.4813915295456 2 498.7479736208916 MULTI CID FTMS 0 0 0 6547 582663.3125 0.5319732444525093 -1 0.1094322204589843 5 Unmodified _ELDDTLKY_ ENSG00000104695|ENST00000221138|PPP2CB;ENSG00000113575|ENST00000481195|PPP2CA;ENST00000472253.1_1_5:133533465-133534901:-|nuORF;nc|ENSG00000113575|P67775-2|PPP2CA 37.97399986684836 0.2681860861828418 1 {[QN]|[E{I|L}]|[KN]}DDT{I|L}KY 8 0 + 61.45 0.0 0.0 6.1729 6.1729 91.986 0.0 0.0 0.0 38.16692218072937 14.024174299985006 14.024174299985006 18.751837901751003 0 0.2614393726401688 1.6989700043360187 0.0 0.3252574989159953 + + {[QN]|[E{I|L}]|[KN]}DDT{I|L}KY;{[QN]|[E{I|L}]|[KN]}VVES{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}D[{I|L}V]S{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}QQ{[MG]|[TS]}KY 6.1729;4.2892;3.8626;2.8851 +;-;-;- + 153 + 1 2.118 57668.0 1.0 3106 3444 6547 DOHH2_400M_050219_1,6552 DOHH2_400M_050219_1,6552,ELDDTLKY False True ELDDTLKY 36.178324 498.747973620892 5778887.0 6547.0 ENSG00000104695|ENST00000221138|PPP2CB;;ENST00000472253.1_1_5:133533465-133534901:-|nuORF;;nc|ENSG00000113575|P67775-2|PPP2CA;;ENSG00000113575|ENST00000481195|PPP2CA 6.517782052357991 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6553 36.181 132.0 705960.0 25 0 68049.0 + 20138 LKPGILPVPK 10 99 531.3576357182029 1060.7007185032055 2 531.3579589724541 MULTI CID FTMS 0 0 0 6547 483370.28125 0.1121722056548803 4 -0.4460716247558594 6 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 24.881564428377168 0.4096545554397951 1 K{I|L}AP{I|L}VKD{I|L} 9 -1 78.124 0.0 0.0 7.3653 0.0 0.0 0.0 80.05134760074452 80.05134760074452 60.47258004721931 0.0 0.0 0.0 0 1.8494850021680087 1.0457574905606752 0.7134679910804405 0.0 K{I|L}AP{I|L}VKD{I|L} 7.3653 - 201 + 1 2.118 74422.1 1.0 3107 3444 6547 DOHH2_400M_050219_1,6553 DOHH2_400M_050219_1,6553,LKPGILPVPK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6554 36.184 130.0 417840.0 25 0 43855.0 + 2783 ATSKVALVY 9 83 476.28012474982665 950.5456965664532 2 476.2799560427666 MULTI CID FTMS 0 0 0 6547 289679.9375 1.0 0 0.0 7 Unmodified _ATSKVALVY_ ENSG00000110955|ENST00000262030|ATP5F1B 21.53697664764585 0.2571576504437394 1 A{I|L}VY 4 5 38.443 0.0 0.0 4.0443 0.0 0.0 486.2802296369157 0.0 486.2802296369157 0.0 31.27636252551653 0.0 0.0 0 1.0 0.0 0.0 0.0 + A{I|L}VY 4.0443 + + 54 1 2.118 46024.6 1.0 3108 3444 6547 DOHH2_400M_050219_1,6554 DOHH2_400M_050219_1,6554,ATSKVALVY False True ATSKVALVY 36.183674 476.279956042767 1806611.0 6547.0 ENSG00000110955|ENST00000262030|ATP5F1B 4.490457534790039 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6555 36.191 429.0 354370.0 25 0 23790.0 + 33124 SETGHVYTF 9 162 520.7374078458377 1039.4602627584752 2 520.7378417849541 MULTI CID FTMS 0 0 0 6547 237903.90625 1.0 0 0.0 8 Unmodified _SETGHVYTF_ ENSG00000112658|ENST00000265354|SRF 85.35673624503755 0.0162188719545379 1 [HV]GTYTDT{M(Oxidation (M))|F} 9 7 + 58.048 0.0 0.0 5.5844 5.5844 83.1 0.0 0.0 0.0 9.200490141570684 12.320342331995596 9.200490141570684 6.510234424404686 0 1.0 0.744727494896694 1.1549471895720984 0.0 [HV]GTYTDT{M(Oxidation (M))|F};[HV]GT{[ES]|[DT]|[{I|L}C]}YT{M(Oxidation (M))|F};[HV]GYTTDT{M(Oxidation (M))|F};{[HG]|PP}TVYTDT{M(Oxidation (M))|F};[HV]GTYTSE{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}V[MN]T{M(Oxidation (M))|F};{[HG]|PP}VTYTDT{M(Oxidation (M))|F};{[HG]|PP}TV{[ES]|[DT]|[{I|L}C]}YT{M(Oxidation (M))|F};{[HG]|PP}T{[ES]|[DT]|[{I|L}C]}VYT{M(Oxidation (M))|F};[HV]GYTTSE{M(Oxidation (M))|F} 5.5844;4.9581;4.912;4.6993;4.4776;4.2504;4.0859;4.073;4.0612;3.8052 -;-;-;-;-;-;-;-;-;- 1433 1 2.118 116968.6 1.0 3109 3444 6547 DOHH2_400M_050219_1,6555 DOHH2_400M_050219_1,6555,SETGHVYTF True True SETGHVYTF 36.191318 520.737841784954 1661714.5 6547.0 ENSG00000112658|ENST00000265354|SRF 6.749310334523519 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6556 36.198 347.0 266400.0 25 0 26518.0 + 32874 SEIEDSTKQVF 11 118 641.8120209705459 1281.6094890078916 2 641.8123657107353 MULTI CID FTMS 0 0 0 6547 230330.0 0.3320212358522175 -1 0.1094322204589843 9 Unmodified _SEIEDSTKQVF_ ENSG00000139618|ENST00000380152|BRCA2 158.07680821502697 3.764132039705826e-07 1 {[QN]|[E{I|L}]|[KN]}SETVE{[ET]|[MV]}V{M(Oxidation (M))|F} 11 7 + 100.98 0.0 0.0 7.8794 7.8794 87.514 0.0 0.0 0.0 11.931890546242345 16.575773191777927 11.931890546242345 4.704751719805017 0 1.6861818737241734 1.3010299956639813 1.5986198691406328 0.9163865622122672 {[QN]|[E{I|L}]|[KN]}SETVE{[ET]|[MV]}V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}SETEV{[ET]|[MV]}V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}SETV{[QC]|[C(Carbamidomethyl (C))A]}QV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}SEDSTKQV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}SETE{I|L}{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}DTTVE{[ET]|[MV]}V{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}ETV{[QC]|[C(Carbamidomethyl (C))A]}QV{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}EDSTKQV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}SETVE{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}ETVE{[ET]|[MV]}V{M(Oxidation (M))|F} 7.8794;7.5123;7.446;7.2381;7.0789;7.0404;6.9484;6.9445;6.8787;6.8708 -;-;-;-;-;-;-;+;-;- + 7036 1 2.118 75454.3 1.0 3110 3444 6547 DOHH2_400M_050219_1,6556 DOHH2_400M_050219_1,6556,SEIEDSTKQVF True True SEIEDSTKQVF 36.197605 641.812365710735 3934642.0 6547.0 ENSG00000139618|ENST00000380152|BRCA2 8.369206110636393 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6557 36.202 230.0 352670.0 25 0 36875.0 + 42168 VSDFRKEFY 9 109 397.5331501617829 1189.5776210855488 3 397.5327941775322 MULTI CID FTMS 0 0 0 6547 199312.796875 1.0 0 0.0 10 Unmodified _VSDFRKEFY_ ENSG00000093009|ENST00000263201|CDC45;ENST00000491520.5_1_22:19467485-19467677:+|nuORF;nc|ENSG00000093009|O75419-2|CDC45;nc|ENSG00000093009|O75419-3|CDC45 7.101721422024254 0.6667666702315642 1 VY[YG]{M(Oxidation (M))|F}Y 6 6 20.15 0.0 0.0 1.6939 0.0 0.0 0.0 394.21335779361567 394.21335779361567 6.170912423450403 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VY[YG]{M(Oxidation (M))|F}Y 1.6939 - 43 + 1 2.118 68959.6 1.0 3111 3444 6547 DOHH2_400M_050219_1,6557 DOHH2_400M_050219_1,6557,VSDFRKEFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6558 36.216 800.0 233510.0 25 0 24662.0 + + -1 LLDPSQKNLY 10 166 595.7961171147916 1189.5776812963832 2 595.7958251833916 MULTI CID FTMS 0 0 0 6547 105211.1015625 1.0 0 0.0 11 Oxidation (M) _M(Oxidation (M))FLLHQKEE_ nc|ENSG00000196418|Q15973-4|ZNF124;ENST00000478942.5_1_19:12246557-12251057:-|nuORF;nc|ENSG00000214189|Q6ZQV5-2|ZNF788P;ENSG00000196646|ENST00000343979|ZNF136;ENSG00000223547|ENST00000439326|ZNF844;ENST00000543124.1_1_12:133624462-133624816:+|nuORF;nc|ENSG00000214189|Q6ZQV5|ZNF788P;ENSG00000257591|ENST00000439556|ZNF625;ENSG00000277462|ENST00000366503|ZNF670;ENST00000464860.1_1_19:12296590-12298813:+|nuORF;ENSG00000257446|ENST00000547628|ZNF878;ENST00000480770.5_3_19:12241465-12247683:-|nuORF;nc|ENSG00000196418|Q15973-5|ZNF124;ENSG00000132010|ENST00000334213|ZNF20;ENSG00000198551|ENST00000361113|ZNF627;ENST00000476676.1_1_19:12296653-12296758:+|nuORF;ENSG00000196418|ENST00000543802|ZNF124;ENST00000539098.5_1_12:133618053-133624816:+|nuORF;ENSG00000198040|ENST00000539354|ZNF84 25.399314129420983 0.2080152500878129 1 VSDHSQ{I|L}E{I|L}Y 10 -1 + 56.589 0.0 0.0 4.7571 4.7571 76.981 0.0 0.0 0.0 3.1777404672385217 3.1777404672385217 3.1777404672385217 3.1777404672385217 0 0.1923877696554315 0.958607314841775 0.0 0.5796896906561032 VSDHSQ{I|L}E{I|L}Y;{I|L}{I|L}[Y{M(Oxidation (M))|F}]QSPD[HA];VSDHTN{I|L}E{I|L}Y;[PS]QKN{I|L}D{I|L}[{M(Oxidation (M))|F}E];{[QS]|[NT]}PKN{I|L}D{I|L}[{M(Oxidation (M))|F}E];VSDHVPDK{M(Oxidation (M))|F}{M(Oxidation (M))|F};VSDG[Y{I|L}]DK{M(Oxidation (M))|F}{M(Oxidation (M))|F};{I|L}{I|L}D[QT]PD{I|L}[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D{I|L}NK{M(Oxidation (M))|F}{M(Oxidation (M))|F};{I|L}{I|L}[Y{M(Oxidation (M))|F}]NTPD[HA] 4.7571;4.49;4.4215;4.3931;4.3013;4.2745;4.2551;4.2243;4.1571;4.1544 -;-;-;-;-;-;-;-;-;- 6716 + 1 2.118 138976.5 0.6200000047683716 3112 3444 6547 DOHH2_400M_050219_1,6558 DOHH2_400M_050219_1,6558,MFLLHQKEE False False LLDPSQKNLY 36.215749 595.795825183392 22115947.5 6547.0 nc|ENSG00000196418|Q15973-4|ZNF124;;ENST00000478942.5_1_19:12246557-12251057:-|nuORF;;nc|ENSG00000214189|Q6ZQV5-2|ZNF788P;;ENSG00000196646|ENST00000343979|ZNF136;;ENSG00000223547|ENST00000439326|ZNF844;;ENST00000543124.1_1_12:133624462-133624816:+|nuORF;;nc|ENSG00000214189|Q6ZQV5|ZNF788P;;ENSG00000257591|ENST00000439556|ZNF625;;ENSG00000277462|ENST00000366503|ZNF670;;ENST00000464860.1_1_19:12296590-12298813:+|nuORF;;ENSG00000257446|ENST00000547628|ZNF878;;ENST00000480770.5_3_19:12241465-12247683:-|nuORF;;nc|ENSG00000196418|Q15973-5|ZNF124;;ENSG00000132010|ENST00000334213|ZNF20;;ENSG00000198551|ENST00000361113|ZNF627;;ENST00000476676.1_1_19:12296653-12296758:+|nuORF;;ENSG00000196418|ENST00000543802|ZNF124;;ENST00000539098.5_1_12:133618053-133624816:+|nuORF;;ENSG00000198040|ENST00000539354|ZNF84 7.787664254506429 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6559 36.23 800.0 286290.0 25 0 31343.0 + + -1 TVDIQNPDITSSRY 14 127 804.8976445026973 1607.7807360721945 2 804.8981811404228 MULTI CID FTMS 0 0 0 6547 105822.5546875 0.1953119746010125 -1 0.1094322204589843 12 Carbamidomethyl (C) _LSWRLFFFWC(Carbamidomethyl (C))F_ ENSG00000015285|ENST00000376701|WAS 5.731851221503515 0.8481046878870278 1 {[TV]|[{I|L}S]}D{I|L}QNPD{I|L}TSS[YR] 14 -1 + 134.55 0.0 0.0 8.3686 8.3686 91.604 0.0 0.0 0.0 85.76651486474027 10.280287236002437 10.280287236002437 9.050244867691433 0 2.3494850021680094 2.0 1.1421590589602533 1.9489700043360187 {[TV]|[{I|L}S]}D{I|L}QNPD{I|L}TSS[YR];{[TV]|[{I|L}S]}D{I|L}[AG]NPD{I|L}TSS[YR];{[TV]|[{I|L}S]}D{I|L}QGGPD{I|L}TSS[YR];{[TV]|[{I|L}S]}D{I|L}QNPD{I|L}AAD{I|L}[HS];{[TV]|[{I|L}S]}D{I|L}QNPD[RV]D{I|L}[HS];{[TV]|[{I|L}S]}D{I|L}[AG]GGPD{I|L}TSS[YR];{[TV]|[{I|L}S]}D{I|L}QYY{I|L}TSS[YR];{[TV]|[{I|L}S]}D{I|L}[AG]NPD{I|L}AAD{I|L}[HS];{[TV]|[{I|L}S]}D{I|L}QGGPD[RV]D{I|L}[HS];{[TV]|[{I|L}S]}D{I|L}[AG]NPD[RV]D{I|L}[HS] 8.3686;7.8057;7.8057;7.4173;7.2654;7.244;6.9698;6.8556;6.7025;6.7025 -;-;-;-;-;-;-;-;-;- 18410 + 1 2.118 159172.4 0.5899999737739563 3113 3444 6547 DOHH2_400M_050219_1,6559 DOHH2_400M_050219_1,6559,LSWRLFFFWCF False False TVDIQNPDITSSRY 36.229597 804.898181140423 3386988.75 6547.0 ENSG00000015285|ENST00000376701|WAS 8.15998633702596 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6560 36.233 199.0 165700.0 25 0 8855.2 -1 LSCLMEHLY 9 73 583.2720185033487 0 583.2721435427666 PEAK CID FTMS 0 0 0 6547 180080.8125 1.0 0 0.0 13 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))LMEHLY_ ENSG00000090863|ENST00000422840|GLG1;nc|ENSG00000090863|Q92896-2|GLG1;nc|ENSG00000090863|Q92896-3|GLG1 8.593279151180031 0.3284076903191179 1 {M(Oxidation (M))|F}Q 2 -1 9.464 0.0 0.0 0.81268 0.0 0.0 218.0683767510348 668.3010347955686 886.3694115466035 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Q 0.81268 - 22 + 1 2.118 33034.5 1.0 3114 3444 6547 DOHH2_400M_050219_1,6560 DOHH2_400M_050219_1,6560,LSCLMEHLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6561 36.241 434.0 206980.0 25 0 11128.0 + + 9413 RPPEKFAL 8 119 479.2796361655189 956.544719397838 2 479.2790710330009 MULTI CID FTMS 0 0 0 6547 147044.40625 0.6238464348145433 1 -0.1200637817382812 14 Unmodified _FKGKFFAI_ nc|ENSG00000164649|Q96GN5-5|CDCA7L;nc|ENSG00000164649|Q96GN5-4|CDCA7L;ENSG00000164649|ENST00000406877|CDCA7L;nc|ENSG00000164649|Q96GN5-2|CDCA7L 32.116972079565 0.368454113111938 1 P{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L} 5 -1 38.271 0.0 0.0 4.001 0.0 0.0 363.20994765449376 0.0 363.20994765449376 0.0 25.779550148593486 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 P{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L} 4.001 - 154 1 2.118 74500.5 1.0 3115 3444 6547 DOHH2_400M_050219_1,6561 DOHH2_400M_050219_1,6561,FKGKFFAI False False RPPEKFAL 36.241136 479.279071033001 2097111.0 6547.0 nc|ENSG00000164649|Q96GN5-5|CDCA7L;;nc|ENSG00000164649|Q96GN5-4|CDCA7L;;ENSG00000164649|ENST00000406877|CDCA7L;;nc|ENSG00000164649|Q96GN5-2|CDCA7L 4.638951301574707 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6562 36.247 229.0 306800.0 25 0 39953.0 + 503 AEGTFPGKI 9 98 460.2484842158184 918.4824154984368 2 460.2479431033134 MULTI CID FTMS 0 0 0 6547 144958.828125 1.0 0 0.0 15 Unmodified _AEGTFPGKI_ ENSG00000126267|ENST00000649813|COX6B1 29.081581746732265 0.1611639662936252 1 {[CP]|[EA]}GT{M(Oxidation (M))|F}PGK{I|L} 9 0 + 18.711 0.0 0.0 2.0372 2.0372 78.34 0.0 0.0 0.0 7.452155295829947 5.594924611389429 5.594924611389429 11.268732363854994 0 0.6069758080123702 0.0 0.0 0.0 + + {[CP]|[EA]}GT{M(Oxidation (M))|F}PGK{I|L};{[CP]|[EA]}GT{M(Oxidation (M))|F}[K{I|L}][PG];[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PGK{I|L};{[CP]|[EA]}GT{M(Oxidation (M))|F}P[KA]V 2.0372;0.8103;0.67103;0.46705 +;-;-;- + 86 + 1 2.118 57396.6 1.0 3116 3444 6547 DOHH2_400M_050219_1,6562 DOHH2_400M_050219_1,6562,AEGTFPGKI False True AEGTFPGKI 36.246897 460.247943103313 2309614.5 6547.0 ENSG00000126267|ENST00000649813|COX6B1 5.394796848297119 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6563 36.261 800.0 152080.0 25 0 10053.0 + 6247 DTNADKQLSF 10 147 569.7726096457317 1137.5306663582633 2 569.7723876833916 MULTI CID FTMS 0 0 0 6547 125539.078125 1.0 0 0.0 16 Unmodified _DTNADKQLSF_ ENSG00000163220|ENST00000368738|S100A9 55.24861242081279 0.0493457817857391 1 {[ES]|[DT]|[{I|L}C]}NAD[KQ]{I|L}S{M(Oxidation (M))|F} 10 0 + 46.403 0.0 0.0 4.0793 4.0793 77.854 0.0 0.0 0.0 6.537209583838219 8.507112333562858 6.537209583838219 6.537209583838219 0 2.309894379144197 0.0 1.0451140161145327 0.0 + + {[ES]|[DT]|[{I|L}C]}NAD[KQ]{I|L}S{M(Oxidation (M))|F};{[QS]|[NT]}DAD[KQ]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGAD[KQ]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NA[KP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NA[K{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}S{M(Oxidation (M))|F};[C(Carbamidomethyl (C))Q]{I|L}D[KQ]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NA[KP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AY;{[QS]|[NT]}DA[K{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}S{M(Oxidation (M))|F};{[CP]|[EA]}[NS]D[KQ]{I|L}S{M(Oxidation (M))|F};[TA][DN]D[KQ]{I|L}S{M(Oxidation (M))|F} 4.0793;3.5046;3.2737;2.0032;1.9488;1.5682;1.5637;1.3741;1.2424;1.0923 +;-;-;-;-;-;-;-;-;- + 517 1 2.118 93326.2 0.5699999928474426 3117 3444 6547 DOHH2_400M_050219_1,6563 DOHH2_400M_050219_1,6563,DTNADKQLSF True True DTNADKQLSF 36.260728 569.772387683392 612264.5625 6547.0 ENSG00000163220|ENST00000368738|S100A9 6.552095572153728 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6564 36.271 615.0 98192.0 25 0 6379.4 26868 PDAHLSAEDF 10 116 551.2450932654511 1100.4756335977022 2 551.2463867068291 MULTI CID FTMS 0 0 0 6547 122662.8671875 0.8824078498364486 1 -0.1200637817382812 17 Unmodified _PDAHLSAEDF_ ENSG00000163870|ENST00000355552|TPRA1;nc|ENSG00000163870|Q86W33-2|TPRA1;nc|ENSG00000163870|Q86W33-3|TPRA1 10.823927491677226 0.6659270209832991 1 WAK{M(Oxidation (M))|F} 4 8 21.146 0.0 0.0 1.9216 0.0 0.0 550.195007232271 0.0 550.195007232271 0.0 8.672137691284405 0.0 0.0 0 0.0 0.0 0.0 0.0 WAK{M(Oxidation (M))|F} 1.9216 - 143 + 1 2.118 50774.6 1.0 3118 3444 6547 DOHH2_400M_050219_1,6564 DOHH2_400M_050219_1,6564,PDAHLSAEDF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6565 36.285 800.0 600090.0 25 0 204600.0 + 31081 RLLDRKVLL 9 145 563.3772499687391 0 563.3770629763603 PEAK CID FTMS 0 0 0 6547 120104.546875 0.2721025191256432 -1 0.1094322204589843 18 Unmodified _RLLDRKVLL_ ENSG00000143457|ENST00000271732|GOLPH3L 44.391923383255 0.047007402258556 1 {I|L}VK[RV]E 6 6 35.326 0.0 0.0 3.1408 0.0 0.0 131.09707493801437 266.1634310358032 397.2605059738176 0.0 0.0 0.0 0.0 0 1.642159058960253 0.0 0.0 1.6307196863200843 {I|L}VK[RV]E 3.1408 - 172 + 1 2.118 363006.9 0.550000011920929 3119 3444 6547 DOHH2_400M_050219_1,6565 DOHH2_400M_050219_1,6565,RLLDRKVLL True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6567 36.29 125.0 295710.0 25 0 18565.0 + 35545 STPTSFNLRP 10 71 560.29479889341 1118.5750448536198 2 560.2953979372978 MULTI CID FTMS 0 0 0 6566 187042.5 0.0515320091560113 2 -0.2367820739746093 1 Unmodified _STPTSFNLRP_ REV__ENSG00000178921|ENST00000314666|PFAS 10.073929032068715 0.6785112666868882 1 MSTNG{I|L}RP 8 -1 46.473 0.0 0.0 4.1546 0.0 0.0 244.14128400255635 0.0 244.14128400255635 0.0 44.25428612921625 0.0 0.0 0 0.0 0.0 0.0 0.0 MSTNG{I|L}RP 4.1546 - 84 + 1 2.118 32534.3 1.0 3120 3445 6566 DOHH2_400M_050219_1,6567 DOHH2_400M_050219_1,6567,STPTSFNLRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6568 36.293 101.0 482310.0 25 0 63691.0 + 15988 ITDPDPDIRY 10 72 602.7964874107504 1203.578421888301 2 602.7966796755791 MULTI CID FTMS 0 0 0 6566 165721.359375 0.1288709647474081 2 -0.2367820739746093 2 Unmodified _ITDPDPDIRY_ ENSG00000198793|ENST00000361445|MTOR 36.506200033944 0.1944608063770638 1 [{I|L}T]D[DP][DP]{I|L}RY 10 0 + 42.98 0.0 0.0 3.571 3.571 76.981 0.0 0.0 0.0 25.021205936218323 9.292199224104678 9.292199224104678 7.226890629795548 0 0.5866968715561641 1.5228787452803376 0.0 0.0 + + [{I|L}T]D[DP][DP]{I|L}RY;[{I|L}T]{[DS]|[MA]|[CV]|TT}AN[HQ]RY;[{I|L}T]D[HS]YA{[DS]|[MA]|[CV]|TT}[VP];[{I|L}T]D{[WS]|[C(Carbamidomethyl (C)){I|L}]}NA{[DS]|[MA]|[CV]|TT}[VP];[{I|L}T][NS]W[HQ]RY;[{I|L}T]{[WS]|[C(Carbamidomethyl (C)){I|L}]}N[HQ]RY 3.571;2.9706;2.6336;2.5535;2.3616;2.3616 +;-;-;-;-;- + 169 + 1 2.118 42841.2 1.0 3121 3445 6566 DOHH2_400M_050219_1,6568 DOHH2_400M_050219_1,6568,ITDPDPDIRY False True ITDPDPDIRY 36.29265 602.796679675579 16841680.0 6566.0 ENSG00000198793|ENST00000361445|MTOR 7.092334588368733 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6569 36.294 80.0 692040.0 25 0 101070.0 + 20256 LLDPSQKNLY 10 73 595.8246148009144 1189.6346766686288 2 595.8246337771416 MULTI CID FTMS 0 0 0 6566 723403.375 0.6030801420074539 -1 0.1200637817382812 3 Unmodified _LLDPSQKNLY_ ENSG00000132010|ENST00000334213|ZNF20;ENSG00000196418|ENST00000543802|ZNF124;ENSG00000196646|ENST00000343979|ZNF136;ENSG00000198040|ENST00000539354|ZNF84;ENSG00000198551|ENST00000361113|ZNF627;ENSG00000223547|ENST00000439326|ZNF844;ENSG00000257446|ENST00000547628|ZNF878;ENSG00000257591|ENST00000439556|ZNF625;ENSG00000277462|ENST00000366503|ZNF670;ENST00000464860.1_1_19:12296590-12298813:+|nuORF;ENST00000476676.1_1_19:12296653-12296758:+|nuORF;ENST00000478942.5_1_19:12246557-12251057:-|nuORF;ENST00000480770.5_3_19:12241465-12247683:-|nuORF;ENST00000539098.5_1_12:133618053-133624816:+|nuORF;ENST00000543124.1_1_12:133624462-133624816:+|nuORF;nc|ENSG00000196418|Q15973-4|ZNF124;nc|ENSG00000196418|Q15973-5|ZNF124;nc|ENSG00000214189|Q6ZQV5-2|ZNF788P;nc|ENSG00000214189|Q6ZQV5|ZNF788P 61.60191391372663 0.0323840705564037 1 {I|L}{I|L}DPT{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y 10 3 + 60.684 0.0 0.0 5.1011 5.1011 86.23 0.0 0.0 0.0 36.73947417307161 6.778259348524358 6.778259348524358 10.783409326844264 0 0.9247425010840048 2.0 0.0 0.7614393726401688 {I|L}{I|L}DPT{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y;[PS]QKN{I|L}D{I|L}[Y{I|L}];{I|L}{I|L}DP{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}Y;[PS]QKND{I|L}{I|L}[Y{I|L}];[PS]QKNVE{I|L}[Y{I|L}];{I|L}{I|L}[YT]YE{I|L}[Y{I|L}];[PS]QDKN{I|L}{I|L}[Y{I|L}];[PS]QKGG{I|L}D{I|L}[Y{I|L}];[PS][AG]KN{I|L}D{I|L}[Y{I|L}];[PS]QKDN{I|L}{I|L}[Y{I|L}] 5.1011;4.1946;4.179;3.6216;3.4939;3.4938;3.4355;3.4243;3.4243;3.3685 -;-;-;-;-;-;-;-;-;- 705 + 1 2.118 47162.9 1.0 3122 3445 6566 DOHH2_400M_050219_1,6569 DOHH2_400M_050219_1,6569,LLDPSQKNLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6570 36.296 69.0 666220.0 25 0 100090.0 + 30084 QVDPNYAYAY 10 67 602.2699799467645 1202.5254069603288 2 602.2702514529228 MULTI CID FTMS 0 0 0 6566 573062.6875 0.9149111002857588 -1 0.1200637817382812 4 Unmodified _QVDPNYAYAY_ ENSG00000004897|ENST00000066544|CDC27;ENST00000425026.1_1_Y:10028050-10028227:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 32.78568957990786 0.2337485590374503 1 [{I|L}T]C(Carbamidomethyl (C))ADRA 7 9 44.288 0.0 0.0 3.6829 0.0 0.0 0.0 412.1519878677897 412.1519878677897 23.48599459218456 0.0 0.0 0.0 0 0.3252574989159953 1.3010299956639813 0.4247425010840047 0.7614393726401688 [{I|L}T]C(Carbamidomethyl (C))ADRA 3.6829 - 308 1 2.118 39969.0 1.0 3123 3445 6566 DOHH2_400M_050219_1,6570 DOHH2_400M_050219_1,6570,QVDPNYAYAY False True QVDPNYAYAY 36.296132 602.270251452923 4425394.0 6566.0 ENST00000425026.1_1_Y:10028050-10028227:-|nuORF;;ENSG00000004897|ENST00000066544|CDC27;;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;;nc|ENSG00000004897|P30260-2|CDC27 3.385699907938639 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6571 36.298 83.0 865350.0 25 0 64784.0 + 757 AERDLYRDTW 10 81 442.2141662528748 1323.6206693588242 3 442.2143737673759 MULTI CID FTMS 0 0 0 6566 565739.0625 0.6631470304951699 -1 0.1200637817382812 5 Unmodified _AERDLYRDTW_ ENSG00000242114|ENST00000266263|MTFP1;nc|ENSG00000242114|Q9UDX5-2|MTFP1 32.89776655970281 0.2325650513667944 1 EA 2 9 32.642 0.0 0.0 2.4661 0.0 0.0 0.0 1120.518775574575 1120.518775574575 8.657528915727788 0.0 0.0 0.0 0 0.6307196863200843 0.8860566476931632 0.0 0.0 EA 2.4661 - 52 + 1 2.118 62987.3 1.0 3124 3445 6566 DOHH2_400M_050219_1,6571 DOHH2_400M_050219_1,6571,AERDLYRDTW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6572 36.3 81.0 795240.0 25 0 75641.0 + 45408 YTDATPLRV 9 92 518.2765714884791 1034.5385900437582 2 518.2772094607353 MULTI CID FTMS 0 0 0 6566 451760.0625 1.0 0 0.0 6 Unmodified _YTDATPLRV_ ENSG00000185163|ENST00000397333|DDX51;ENST00000329073.8_1_12:132625785-132627411:-|nuORF;ENST00000545991.1_1_12:132626393-132626546:-|nuORF;ENST00000546058.1_1_12:132626393-132626917:-|nuORF 62.57269311338072 0.0246576765497938 1 YTDATV 6 3 80.578 0.0 0.0 7.7888 0.0 0.0 0.0 381.2258089654906 381.2258089654906 63.79554172835816 0.0 0.0 0.0 0 0.7614393726401688 2.0 1.2302046884880935 0.0 YTDATV 7.7888 - 176 + 1 2.118 51963.1 1.0 3125 3445 6566 DOHH2_400M_050219_1,6572 DOHH2_400M_050219_1,6572,YTDATPLRV True True YTDATPLRV 36.299842 518.277209460735 5671233.0 6566.0 ENSG00000185163|ENST00000397333|DDX51;;ENST00000545991.1_1_12:132626393-132626546:-|nuORF;;ENST00000329073.8_1_12:132625785-132627411:-|nuORF;;ENST00000546058.1_1_12:132626393-132626917:-|nuORF 5.300598780314128 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6573 36.303 149.0 397710.0 25 0 54371.0 40849 VLNTALPA 8 100 399.73859184063866 797.4626307480773 2 399.7382690310478 MULTI CID FTMS 0 0 0 6566 368611.34375 0.7258418055448467 2 -0.2367820739746093 7 Unmodified _VLNTALPA_ ENSG00000184271|ENST00000333640|POU6F1 2.577480529830294 0.808687252328423 1 R 1 8 0.9691 0.0 0.0 0.12152 0.0 0.0 399.23772948030233 239.0924471490844 638.3301766293868 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.12152 - 3 + 1 2.118 51885.1 1.0 3126 3445 6566 DOHH2_400M_050219_1,6573 DOHH2_400M_050219_1,6573,VLNTALPA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6574 36.306 151.0 447170.0 25 0 34233.0 + 38595 TTDPYLTNSY 10 108 587.7664475260331 1173.518342118866 2 587.7672607302666 MULTI CID FTMS 0 0 0 6566 318788.1875 0.2543904019924262 -1 0.1200637817382812 8 Unmodified _TTDPYLTNSY_ ENSG00000182022|ENST00000435907|CHST15;nc|ENSG00000182022|Q7LFX5-2|CHST15 68.08070601005525 0.0189984391031388 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TDT 6 6 37.911 0.0 0.0 3.2305 0.0 0.0 0.0 480.1707218398223 480.1707218398223 6.356150930823148 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.174742501084005 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TDT 3.2305 - 766 1 2.118 53947.9 1.0 3127 3445 6566 DOHH2_400M_050219_1,6574 DOHH2_400M_050219_1,6574,TTDPYLTNSY True True TTDPYLTNSY 36.30583 587.767260730267 15270153.0 6566.0 ENSG00000182022|ENST00000435907|CHST15;;nc|ENSG00000182022|Q7LFX5-2|CHST15 7.023658116658528 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6575 36.309 161.0 462120.0 25 0 127120.0 + 758 AERDLYRDTW 10 62 662.8172648841817 1323.6199768351632 2 662.8175536990166 MULTI CID FTMS 0 0 0 6566 273718.0625 0.7210384296584867 -1 0.1200637817382812 9 Unmodified _AERDLYRDTW_ ENSG00000242114|ENST00000266263|MTFP1;nc|ENSG00000242114|Q9UDX5-2|MTFP1 40.72490554402381 0.149912226101682 1 {[CP]|[EA]}RD{I|L}{[DS]|[MA]|[CV]|TT}Y{[VA]|[{I|L}G]}W 11 5 + 45.463 0.0 0.0 3.4348 3.4348 84.269 0.0 0.0 0.0 20.99926060438829 8.70561685313934 8.70561685313934 45.46321075614895 0 1.174742501084005 0.0 0.0 0.3494850021680094 {[CP]|[EA]}RD{I|L}{[DS]|[MA]|[CV]|TT}Y{[VA]|[{I|L}G]}W 3.4348 - 69 + 1 2.118 59454.4 1.0 3128 3445 6566 DOHH2_400M_050219_1,6575 DOHH2_400M_050219_1,6575,AERDLYRDTW False True AERDLYRDTW 36.309025 662.817553699017 7449687.25 6566.0 ENSG00000242114|ENST00000266263|MTFP1;;nc|ENSG00000242114|Q9UDX5-2|MTFP1 8.927671432495117 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6576 36.312 162.0 363620.0 25 0 53365.0 + 10928 GAKRHSGL 8 105 413.2388644783535 824.463176023507 2 413.2383911013603 MULTI CID FTMS 0 0 0 6566 264675.625 0.1991448285669356 -12 1.354534149169922 10 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 5.230669730166228 0.792582437072536 1 {M(Oxidation (M))|F} 1 -1 1.9897 0.0 0.0 0.24133 0.0 0.0 523.3267452147164 151.04035364322502 674.3670988579414 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.24133 - 5 + 1 2.118 49554.5 1.0 3129 3445 6566 DOHH2_400M_050219_1,6576 DOHH2_400M_050219_1,6576,GAKRHSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6577 36.316 207.0 501950.0 25 0 31871.0 37547 TLHSSRTL 8 126 457.75644405653793 913.498335179876 2 457.7566711306572 MULTI CID FTMS 0 0 0 6566 216630.890625 0.0907969272703382 -2 0.2294960021972656 11 Unmodified _TLHSSRTL_ ENSG00000159409|ENST00000290583|CELF3;nc|ENSG00000159409|Q5SZQ8-2|CELF3;nc|ENSG00000159409|Q5SZQ8-3|CELF3;nc|ENSG00000159409|Q5SZQ8-4|CELF3 36.04419817259434 0.3004715606373109 1 RNVGNT{I|L} 7 6 64.245 0.0 0.0 7.0328 0.0 0.0 141.07911879707189 0.0 141.07911879707189 0.0 28.15752626053026 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.7614393726401688 RNVGNT{I|L} 7.0328 - 1172 1 2.118 82136.8 1.0 3130 3445 6566 DOHH2_400M_050219_1,6577 DOHH2_400M_050219_1,6577,TLHSSRTL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6578 36.32 221.0 289690.0 25 0 20916.0 + 29485 QLKFARSL 8 79 481.7928291261453 961.5711053190906 2 481.7926208376884 MULTI CID FTMS 0 0 0 6566 211516.265625 0.5167415036800114 1 -0.108917236328125 12 Unmodified _QLKFARSL_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;nc|ENSG00000174748|P61313-2|RPL15 18.1463463914782 0.6428359029697936 1 [Q{I|L}]K{M(Oxidation (M))|F}A 5 3 39.353 0.0 0.0 4.0926 0.0 0.0 0.0 371.20478235416255 371.20478235416255 27.933432321783744 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.4247425010840047 + [Q{I|L}]K{M(Oxidation (M))|F}A 4.0926 + + 44 + 1 2.118 52917.9 1.0 3131 3445 6566 DOHH2_400M_050219_1,6578 DOHH2_400M_050219_1,6578,QLKFARSL False True QLKFARSL 36.32029 481.792620837688 1992544.0 6566.0 ENST00000490223.1_1_3:23959920-23960989:+|nuORF;;ENSG00000174748|ENST00000307839|RPL15;;nc|ENSG00000174748|P61313-2|RPL15;;ENST00000436146.1_1_3:23959450-23960989:+|nuORF 3.5749308268229165 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6579 36.324 217.0 316390.0 25 0 54911.0 + 21488 LPHSKNEITF 10 82 395.88021965059 1184.61882955197 3 395.8801147341728 MULTI CID FTMS 0 0 0 6566 186355.484375 1.0 0 0.0 13 Unmodified _LPHSKNEITF_ ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2 12.872603262515298 0.6315522313594999 1 ET{M(Oxidation (M))|F} 3 7 23.188 0.0 0.0 1.9574 0.0 0.0 789.4433022869231 0.0 789.4433022869231 0.0 11.402357234801029 0.0 0.0 0 0.0 0.0 0.0 0.0 ET{M(Oxidation (M))|F} 1.9574 - 34 + 1 2.118 56597.4 1.0 3132 3445 6566 DOHH2_400M_050219_1,6579 DOHH2_400M_050219_1,6579,LPHSKNEITF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6580 36.338 800.0 148600.0 25 0 11084.0 43503 WWWWIWWQWW 10 92 874.9042007258124 1747.7938485184247 2 875.3975707888603 MULTI CID FTMS 0 0 0 6566 188740.75 0.0726378271700724 11 -1.18975830078125 14 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.4583401331227399 0.7245164002484112 1 QDAN{I|L}DP{[QN]|[E{I|L}]|[KN]} 9 8 67.841 0.0 0.0 3.8815 0.0 0.0 734.3690052716812 0.0 734.3690052716812 0.0 43.00820653692661 0.0 0.0 0 0.8494850021680094 0.0 0.3252574989159953 1.4489700043360187 QDAN{I|L}DP{[QN]|[E{I|L}]|[KN]} 3.8815 - 587 1 2.118 82613.0 0.699999988079071 3133 3445 6566 DOHH2_400M_050219_1,6580 DOHH2_400M_050219_1,6580,WWWWIWWQWW False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 6581 36.352 800.0 103430.0 25 0 8895.5 -1 QSDIMTMFENN 11 119 681.2712137388157 1360.5278745444314 2 681.2711669802666 MULTI CID FTMS 0 0 0 6566 157541.375 1.0 0 0.0 15 2 Oxidation (M) _QSDIM(Oxidation (M))TM(Oxidation (M))FENN_ ENSG00000137948|ENST00000399546|BRDT;nc|ENSG00000137948|Q58F21-2|BRDT;nc|ENSG00000137948|Q58F21-3|BRDT;nc|ENSG00000137948|Q58F21-4|BRDT;nc|ENSG00000137948|Q58F21-5|BRDT 23.78978130925829 0.5336113198261219 1 [NS]E{I|L}SCC{I|L} 8 -1 68.638 0.0 0.0 5.045 0.0 0.0 0.0 508.16523961695015 508.16523961695015 44.4812969097282 0.0 0.0 0.0 0 1.0 1.3979400086720375 1.610924374808178 1.2174165578762486 [NS]E{I|L}SCC{I|L} 5.045 - 1031 1 2.118 65757.8 0.699999988079071 3134 3445 6566 DOHH2_400M_050219_1,6581 DOHH2_400M_050219_1,6581,QSDIMTMFENN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6582 36.366 800.0 178720.0 25 0 15843.0 26273 NQQFWETTFYN 11 125 739.3219130857302 1476.6292732382603 2 739.3220092654228 MULTI CID FTMS 0 0 0 6566 132010.078125 1.0 0 0.0 16 Unmodified _NQQFWETTFYN_ ENSG00000133812|ENST00000256190|SBF2;ENST00000533770.5_1_11:9861043-10215451:-|nuORF;nc|ENSG00000133812|Q86WG5-3|SBF2 9.38312468134398 0.8308777417566128 1 {[QG]|[NA]}GAGHEAQQNA{M(Oxidation (M))|F}Y 14 11 + 101.24 0.0 0.0 6.8563 6.8563 85.225 0.0 0.0 0.0 5.13695333972673 11.504697682456351 5.13695333972673 4.293158949553998 0 1.218765315847925 0.7958800173440752 0.3807196863200844 2.413529196767072 {[QG]|[NA]}GAGHEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQHEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGHEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}AGGHEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGHEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGHEA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGHEAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}QHEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QGHEAQQNA{M(Oxidation (M))|F}Y;[AG]NAGHEAQQNA{M(Oxidation (M))|F}Y 6.8563;6.5655;6.5084;6.2512;6.2434;6.2434;6.2434;6.2194;6.2092;6.1444 -;-;-;-;-;-;-;-;-;- 7579 1 2.118 102368.0 0.6499999761581421 3135 3445 6566 DOHH2_400M_050219_1,6582 DOHH2_400M_050219_1,6582,NQQFWETTFYN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6583 36.37 142.0 415550.0 25 0 44159.0 27388 PIGKTQLL 8 88 435.2762147002822 868.5378764673644 2 435.2759887576103 MULTI CID FTMS 0 0 0 6566 124447.671875 1.0 0 0.0 17 Unmodified _PIGKTQLL_ ENSG00000198826|ENST00000361627|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A 5.760428011301431 0.7893668129297577 1 T{I|L} 2 6 16.039 0.0 0.0 1.8467 0.0 0.0 636.3952353314254 0.0 636.3952353314254 0.0 10.55462187404089 0.0 0.0 0 0.0 0.0 0.2059771852360797 0.0 T{I|L} 1.8467 - 16 + 1 2.118 51461.0 1.0 3136 3445 6566 DOHH2_400M_050219_1,6583 DOHH2_400M_050219_1,6583,PIGKTQLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6584 36.377 372.0 156110.0 25 0 18396.0 41587 VPPKVTTT 8 112 421.7516385099368 841.4887240866735 2 421.7515746951103 MULTI CID FTMS 0 0 0 6566 123395.09375 0.24026344600572 -12 1.354534149169922 18 Unmodified _VPPKVTTT_ ENSG00000113249|ENST00000523175|HAVCR1 2.577480529830294 0.808687252328423 1 {M(Oxidation (M))|F} 1 8 11.594 0.0 0.0 1.3778 0.0 0.0 676.4094984780783 0.0 676.4094984780783 0.0 -6.373453591370684 -6.373453591370684 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3778 - 14 + 1 2.118 49249.1 1.0 3137 3445 6566 DOHH2_400M_050219_1,6584 DOHH2_400M_050219_1,6584,VPPKVTTT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6585 36.38 183.0 329200.0 25 0 23716.0 + 39679 VEELFERKY 9 74 404.8799071157797 1211.617891947539 3 404.8796569705009 MULTI CID FTMS 0 0 0 6566 124941.375 0.4340993933003104 -1 0.1200637817382812 19 Unmodified _VEELFERKY_ ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 36.506200033944 0.094635877243972 1 VEE{I|L}{M(Oxidation (M))|F}E[RK]Y 9 0 + 77.075 0.0 0.0 6.3613 6.3613 89.265 0.0 0.0 0.0 54.6277502416482 5.686362358410122 5.686362358410122 9.208187539523747 0 0.3252574989159953 2.0 1.0 0.0 + + VEE{I|L}{M(Oxidation (M))|F}E[RK]Y;VEE{I|L}{M(Oxidation (M))|F}[Q{I|L}][TA]Y;VEE{I|L}{M(Oxidation (M))|F}[HA][TA]PV;{[TV]|[{I|L}S]}[HK]E{M(Oxidation (M))|F}{I|L}[HC]V;{[TV]|[{I|L}S]}{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}[YE]EV;{[TV]|[{I|L}S]}{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}EEYV 6.3613;5.6013;4.5845;2.6969;2.0547;1.8062 +;-;-;-;-;- + 261 + 1 2.118 53391.3 1.0 3138 3445 6566 DOHH2_400M_050219_1,6585 DOHH2_400M_050219_1,6585,VEELFERKY True True VEELFERKY 36.380427 404.879656970501 1005316.8125 6566.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENSG00000263001|ENST00000573035|GTF2I 2.4604565699895224 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6586 36.394 800.0 110200.0 25 0 4649.6 + 29078 QELQEINRVY 10 141 646.3365965926039 1290.6586402520077 2 646.3370849490166 MULTI CID FTMS 0 0 0 6566 99878.28125 1.0 0 0.0 20 Unmodified _QELQEINRVY_ ENSG00000182718|ENST00000451270|ANXA2;nc|ENSG00000182718|P07355-2|ANXA2;nc|ENSG00000231991|A6NMY6|ANXA2P2 48.07275321834293 0.0914622731454193 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QE{I|L}RRGY 10 2 + 41.647 0.0 0.0 3.2268 3.2268 77.64 0.0 0.0 0.0 27.04251328923327 2.072807136214003 2.072807136214003 9.164539485499247 0 0.8494850021680094 0.0 0.0 0.75 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QE{I|L}RRGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[AG]E{I|L}RRGY 3.2268;2.5167 -;- 540 + 1 2.118 71925.9 0.4900000095367431 3139 3445 6566 DOHH2_400M_050219_1,6586 DOHH2_400M_050219_1,6586,QELQEINRVY True True QELQEINRVY 36.394265 646.337084949017 577947.9375 6566.0 ENSG00000182718|ENST00000451270|ANXA2;;nc|ENSG00000182718|P07355-2|ANXA2;;nc|ENSG00000231991|A6NMY6|ANXA2P2 5.524989763895671 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6588 36.399 64.0 1133700.0 25 0 262710.0 41131 VPAAPDVL 8 88 391.2250775758323 780.4356022184646 2 391.2249328494072 MULTI CID FTMS 0 0 0 6587 891650.375 0.6908688583622583 3 -0.2924766540527344 1 Unmodified _VPAAPDVL_ ENST00000470139.1_2_1:43891781-43893406:+|nuORF;ENST00000562955.2_2_1:43891781-43892740:+|nuORF 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.118 62986.6 1.0 3140 3446 6587 DOHH2_400M_050219_1,6588 DOHH2_400M_050219_1,6588,VPAAPDVL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6589 36.402 113.0 486410.0 25 0 47657.0 + 39662 VEDPGATFFY 10 81 573.2594714049017 1144.5043898766032 2 573.2592040896416 MULTI CID FTMS 0 0 0 6587 248037.296875 0.2584946662878413 2 -0.2170906066894531 2 Unmodified _VEDPGATFFY_ REV__ENSG00000138430|ENST00000284719|OLA1;REV__ENST00000392560.6_1_2:174940156-174989039:-|nuORF;REV__ENST00000396387.2_1_22:42503789-42504386:-|nuORF;REV__ENST00000462000.1_1_2:174945834-174988397:-|nuORF;REV__nc|ENSG00000138430|Q9NTK5-2|OLA1 24.020572477871973 0.4289996903560794 1 {NN|[MP]|[D{I|L}]|[EV]}DVEQ[YT]Y 9 -1 + 59.051 0.0 0.0 5.1595 5.1595 87.218 0.0 0.0 0.0 28.834712513337948 13.199849938126889 13.199849938126889 13.426003480513486 0 0.7742275032520141 2.0 0.5 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}DVEQ[YT]Y;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[VP]Q[YT]Y;{NN|[MP]|[D{I|L}]|[EV]}DVE[AG][YT]Y;{NN|[MP]|[D{I|L}]|[EV]}M[DV]ET[WH];{[CP]|[EA]}E{I|L}EQ[YT]Y;{[CP]|[EA]}E{I|L}E[AG][YT]Y;{[ES]|[DT]|[{I|L}C]}[QT]QET[WH];{[ES]|[DT]|[{I|L}C]}[QT][AG]ET[WH] 5.1595;3.9865;3.9839;3.0186;2.7979;1.6222;1.0549;0.25038 -;-;-;-;-;-;-;- 123 + 1 2.118 43907.2 1.0 3141 3446 6587 DOHH2_400M_050219_1,6589 DOHH2_400M_050219_1,6589,VEDPGATFFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6590 36.403 66.0 1123000.0 25 0 152190.0 + 45414 YTDFDGTRVY 10 68 618.7803409723612 1235.5461290115222 2 618.7805053591728 MULTI CID FTMS 0 0 0 6587 859008.8125 0.3921890407115669 -1 0.108917236328125 3 Unmodified _YTDFDGTRVY_ ENSG00000102096|ENST00000376509|PIM2;ENSG00000137193|ENST00000373509|PIM1;ENSG00000198355|ENST00000360612|PIM3;nc|ENSG00000137193|P11309-2|PIM1 57.10758569107544 0.0441734977746303 1 YTD{M(Oxidation (M))|F}DGTRVY 10 0 + 97.216 0.0 0.0 7.8683 7.8683 96.796 0.0 0.0 0.0 79.87002527416834 16.695152255670536 16.695152255670536 27.95371572735597 0 1.6237125054200234 2.0 0.3807196863200844 0.3807196863200844 + + YTD{M(Oxidation (M))|F}DGTRVY;YTD{M(Oxidation (M))|F}{M(Oxidation (M))|F}[VP]{[QG]|[NA]}Y;{[WT]|[RM]}[H{I|L}]GD{M(Oxidation (M))|F}D[{M(Oxidation (M))|F}V];{[WT]|[RM]}[H{I|L}]GD[MD]VY 7.8683;5.6058;2.8278;1.3886 +;-;-;- + 144 + 1 2.118 58152.9 1.0 3142 3446 6587 DOHH2_400M_050219_1,6590 DOHH2_400M_050219_1,6590,YTDFDGTRVY True True YTDFDGTRVY 36.403181 618.780505359173 24265226.0 6587.0 ENSG00000198355|ENST00000360612|PIM3;;nc|ENSG00000137193|P11309-2|PIM1;;ENSG00000137193|ENST00000373509|PIM1;;ENSG00000102096|ENST00000376509|PIM2 7.736522197723389 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6591 36.406 149.0 567080.0 25 0 47999.0 + 32879 SEIENVHGF 9 110 516.2433987391904 1030.4722445451807 2 516.2435790896416 MULTI CID FTMS 0 0 0 6587 380746.28125 0.259948215522559 -1 0.108917236328125 4 Unmodified _SEIENVHGF_ ENSG00000075711|ENST00000667157|DLG1;ENST00000471733.5_1_3:196807912-197024075:-|nuORF;ENST00000485409.5_1_3:196921289-197023334:-|nuORF;nc|ENSG00000075711|Q12959-2|DLG1;nc|ENSG00000075711|Q12959-3|DLG1;nc|ENSG00000075711|Q12959-5|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959|DLG1 37.97399986684836 0.0865783450051559 1 {[ES]|[DT]|[{I|L}C]}{I|L}EGGVH{[CT]|[{M(Oxidation (M))|F}G]} 10 2 + 52.803 0.0 0.0 5.1242 5.1242 74.526 0.0 0.0 0.0 26.22628844165979 9.706425615789115 9.706425615789115 0.5115252244738144 0 0.8494850021680094 0.0 1.1455075894463156 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}EGGVH{[CT]|[{M(Oxidation (M))|F}G]};{[ES]|[DT]|[{I|L}C]}{I|L}EGRH{[CT]|[{M(Oxidation (M))|F}G]};{[ES]|[DT]|[{I|L}C]}{I|L}ENVH{[CT]|[{M(Oxidation (M))|F}G]};{[ES]|[DT]|[{I|L}C]}{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]}D[VP];{[QD]|[EN]|[WG]|[KD]|[RS]}[KS]GGVH{[CT]|[{M(Oxidation (M))|F}G]};{[QD]|[EN]|[WG]|[KD]|[RS]}[KS]GRH{[CT]|[{M(Oxidation (M))|F}G]};{[ES]|[DT]|[{I|L}C]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}RHW;{[ES]|[DT]|[{I|L}C]}{I|L}WWD[VP];{[ES]|[DT]|[{I|L}C]}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}E]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KS]NVH{[CT]|[{M(Oxidation (M))|F}G]} 5.1242;5.0745;4.2577;2.266;2.068;2.0184;1.6477;1.6373;1.5501;1.2016 -;-;+;-;-;-;-;-;-;- + 845 + 1 2.118 66555.0 1.0 3143 3446 6587 DOHH2_400M_050219_1,6591 DOHH2_400M_050219_1,6591,SEIENVHGF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6592 36.414 416.0 230870.0 25 0 14965.0 + 26384 NTDFYQTSY 9 139 569.7383561472091 1137.462159361218 2 569.7382690310478 MULTI CID FTMS 0 0 0 6587 230090.609375 1.0 0 0.0 5 Unmodified _NTDFYQTSY_ ENSG00000145817|ENST00000274496|YIPF5;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;ENST00000522203.5_1_5:143545115-143549519:-|nuORF;nc|ENSG00000145817|Q969M3-3|YIPF5 41.8396318013385 0.0653578398400075 1 {[QS]|[NT]}D{M(Oxidation (M))|F}Y 5 4 44.446 0.0 0.0 3.9075 0.0 0.0 0.0 494.19162648451805 494.19162648451805 24.80497365712037 0.0 0.0 0.0 0 0.0 1.154901959985743 1.2304764623983973 0.4650302283996909 + {[QS]|[NT]}D{M(Oxidation (M))|F}Y 3.9075 + + 449 1 2.118 75974.3 1.0 3144 3446 6587 DOHH2_400M_050219_1,6592 DOHH2_400M_050219_1,6592,NTDFYQTSY True True NTDFYQTSY 36.41361 569.738269031048 1583517.5 6587.0 ENST00000522203.5_1_5:143545115-143549519:-|nuORF;;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;;ENSG00000145817|ENST00000274496|YIPF5;;nc|ENSG00000145817|Q969M3-3|YIPF5 2.2192970911661782 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6593 36.418 207.0 363450.0 25 0 56166.0 + 34345 SLSPTRLLSL 10 117 362.8885972324797 0 362.8885986208916 PEAK CID FTMS 0 0 0 6587 232951.671875 0.8919566830251908 -1 0.108917236328125 6 Unmodified _SLSPTRLLSL_ ENSG00000161681|ENST00000293441|SHANK1;nc|ENSG00000161681|Q9Y566-2|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1 24.020572477871973 0.2658879206942018 1 D 1 10 7.7866 0.0 0.0 1.0758 0.0 0.0 523.6466880178907 82.06688104801015 605.7135690659009 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 D 1.0758 - 19 + 1 2.118 66929.1 1.0 3145 3446 6587 DOHH2_400M_050219_1,6593 DOHH2_400M_050219_1,6593,SLSPTRLLSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6594 36.425 429.0 406770.0 25 0 23898.0 + 7743 ELEKKLVAI 9 160 521.828893997524 1041.643235061848 2 521.8292114138603 MULTI CID FTMS 0 0 0 6587 217939.25 0.7195155947098386 -1 0.108917236328125 7 Unmodified _ELEKKLVAI_ ENSG00000155561|ENST00000285968|NUP205 89.40071534611396 0.0152361884002446 1 {[QN]|[E{I|L}]|[KN]}KVKA{I|L}E{I|L} 9 5 + 66.684 0.0 0.0 6.4018 6.4018 61.592 0.0 0.0 0.0 18.06311320251289 37.67175092765597 18.06311320251289 0.0 0 0.805462187404089 2.0 1.7059771852360797 0.0 {[QN]|[E{I|L}]|[KN]}KVKA{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}KKVA{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}KKE{I|L}VA{I|L};{[QN]|[E{I|L}]|[KN]}KVK{I|L}EA{I|L};{[QN]|[E{I|L}]|[KN]}KKV{I|L}EA{I|L};{[QN]|[E{I|L}]|[KN]}KV{[SA]|[TG]}{I|L}VA{I|L};{[QN]|[E{I|L}]|[KN]}KKV{I|L}AE{I|L};{[QN]|[E{I|L}]|[KN]}KVK{I|L}AE{I|L};{[QN]|[E{I|L}]|[KN]}KKVAR[KA];{[QN]|[E{I|L}]|[KN]}KVKAR[KA] 6.4018;6.4018;6.3569;6.2474;6.2474;5.4729;5.2782;5.2782;4.3036;4.3036 -;-;-;-;-;-;-;-;-;- 5015 1 2.118 138114.7 1.0 3146 3446 6587 DOHH2_400M_050219_1,6594 DOHH2_400M_050219_1,6594,ELEKKLVAI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6595 36.43 266.0 330300.0 25 0 20898.0 + 33536 SILERKEVL 9 112 543.8294060073346 1085.644259081469 2 543.8295165896416 MULTI CID FTMS 0 0 0 6587 212713.1875 0.9448192134087608 -1 0.108917236328125 8 Unmodified _SILERKEVL_ ENSG00000162512|ENST00000339394|SDC3 68.08070601005525 0.0218408846571049 1 {[TV]|[{I|L}S]}{I|L}Q{[CP]|[EA]}{I|L}TV 9 5 61.116 0.0 0.0 5.6295 0.0 0.0 0.0 128.07196562317952 128.07196562317952 38.90962057178156 0.0 0.0 0.0 0 0.6861818737241735 2.0 2.344187677400525 0.0 {[TV]|[{I|L}S]}{I|L}Q{[CP]|[EA]}{I|L}TV 5.6295 - 440 1 2.118 74012.1 1.0 3147 3446 6587 DOHH2_400M_050219_1,6595 DOHH2_400M_050219_1,6595,SILERKEVL True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6596 36.436 328.0 211240.0 25 0 31947.0 + -1 FSDKQQTMI 9 98 557.2640581126601 0 557.2641479372978 PEAK CID FTMS 0 0 0 6587 170649.234375 1.0 0 0.0 9 Oxidation (M) _FSDKQQTM(Oxidation (M))I_ REV__ENSG00000138434|ENST00000431877|ITPRID2;REV__ENST00000440623.5_1_2:182756982-182781157:+|nuORF;REV__nc|ENSG00000138434|P28290-2|ITPRID2;REV__nc|ENSG00000138434|P28290-3|ITPRID2 22.736283301280096 0.1762661025464585 1 SDPDPP 6 -1 30.425 0.0 0.0 2.7348 0.0 0.0 147.06864453325016 354.1667879693969 501.2354325026471 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 SDPDPP 2.7348 - 152 + 1 2.118 57082.2 1.0 3148 3446 6587 DOHH2_400M_050219_1,6596 DOHH2_400M_050219_1,6596,FSDKQQTMI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6597 36.45 800.0 155760.0 25 0 6725.5 + 13773 HSDQQVFEY 9 153 576.7514886074251 1151.4884242816502 2 576.7518798708916 MULTI CID FTMS 0 0 0 6587 128633.8046875 0.0929059504490372 2 -0.2170906066894531 10 Unmodified _HSDQQVFEY_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 23.78978130925829 0.2284941198415988 1 QV{M(Oxidation (M))|F}EY 5 4 43.337 0.0 0.0 3.7636 0.0 0.0 467.1757984845719 0.0 467.1757984845719 0.0 22.12262169814341 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.2887254899964357 + QV{M(Oxidation (M))|F}EY 3.7636 + + 1128 1 2.118 94146.3 0.6499999761581421 3149 3446 6587 DOHH2_400M_050219_1,6597 DOHH2_400M_050219_1,6597,HSDQQVFEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6598 36.453 181.0 366470.0 25 0 61306.0 + 37186 TIEPVPTI 8 95 435.2515280440389 868.4885031548779 2 435.2502319216728 MULTI CID FTMS 0 0 0 6587 127220.203125 0.0893249127956574 -23 2.611011505126953 11 Unmodified _TIEPVPTI_ REV__ENSG00000187775|ENST00000389840|DNAH17;REV__ENST00000586052.5_1_17:76475094-76487566:-|nuORF 5.760428011301431 0.7893668129297577 1 {I|L} 1 -1 13.099 0.0 0.0 1.5082 0.0 0.0 737.3936678050717 0.0 737.3936678050717 0.0 13.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5082 + + 10 + 1 2.118 58244.6 1.0 3150 3446 6587 DOHH2_400M_050219_1,6598 DOHH2_400M_050219_1,6598,TIEPVPTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6599 36.467 800.0 235680.0 25 0 44901.0 + 23728 RPRKAFLL 8 167 500.8241572849276 999.6337616366552 2 500.8246032595634 MULTI CID FTMS 0 0 0 6587 108839.125 1.0 0 0.0 12 Unmodified _LTVKSLVQL_ ENSG00000155660|ENST00000652332|PDIA4 21.74664581756881 0.2544899275067181 1 {[QN]|[E{I|L}]|[KN]}{I|L} 3 7 21.31 0.0 0.0 2.1318 0.0 0.0 0.0 641.3926477052677 641.3926477052677 2.7962836955933383 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.1643943297944484 0.0 {[QN]|[E{I|L}]|[KN]}{I|L} 2.1318 - 554 1 2.118 146566.4 0.5199999809265137 3151 3446 6587 DOHH2_400M_050219_1,6599 DOHH2_400M_050219_1,6599,LTVKSLVQL False False RPRKAFLL 36.467231 500.8255 649233.3125 6587.0 ENSG00000155660|ENST00000652332|PDIA4 -0.4263853728771209 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6600 36.482 800.0 81973.0 25 0 3480.4 -1 DEINLPDMDKY 11 112 684.8025222776724 1367.5904916221448 2 684.8021728396416 MULTI CID FTMS 0 0 0 6587 105773.65625 1.0 0 0.0 13 Oxidation (M) _DEINLPDM(Oxidation (M))DKY_ ENSG00000197102|ENST00000360184|DYNC1H1 8.745405648335112 0.8338865417133445 1 DPW[HV]TNY 8 -1 32.037 0.0 0.0 2.3426 0.0 0.0 337.14570329357804 0.0 337.14570329357804 0.0 1.490546050082159 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.9436726795685342 DPW[HV]TNY 2.3426 - 717 + 1 2.118 53294.8 0.6200000047683716 3152 3446 6587 DOHH2_400M_050219_1,6600 DOHH2_400M_050219_1,6600,DEINLPDMDKY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6601 36.496 800.0 142860.0 25 0 8629.7 + 41900 VQDPNSFAEY 10 153 585.2592770671276 1168.5040012010552 2 585.2601196169853 MULTI CID FTMS 0 0 0 6587 88328.8046875 1.0 0 0.0 14 Unmodified _VQDPNSFAEY_ ENSG00000215012|ENST00000328554|RTL10 43.77239144664712 0.1177314611616471 1 YYS{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}AEY 9 5 + 50.383 0.0 0.0 4.3117 4.3117 75.366 0.0 0.0 0.0 3.135724462773638 8.697114610913488 3.135724462773638 3.135724462773638 0 0.6435078169319297 1.5228787452803376 0.6549471895720984 0.9247425010840048 YYS{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}AEY;[NP]SD{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}AEY;[NP]S{M(Oxidation (M))|F}ADRAEY;[NP]S{M(Oxidation (M))|F}WRAEY;[NP]DS{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}AEY;[Y{M(Oxidation (M))|F}]A{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}[MT]Y;[Y{M(Oxidation (M))|F}]A{M(Oxidation (M))|F}[QT]TEY;YY[WK]{M(Oxidation (M))|F}AEY;[NP]S{M(Oxidation (M))|F}AD[VG]AEY;[NP]S{M(Oxidation (M))|F}W[VG]AEY 4.3117;4.0434;3.7994;3.7556;3.4294;3.3949;3.2089;3.1968;3.0151;2.9676 -;-;-;-;-;-;-;-;-;- 1436 1 2.118 87063.7 0.5699999928474426 3153 3446 6587 DOHH2_400M_050219_1,6601 DOHH2_400M_050219_1,6601,VQDPNSFAEY True True VQDPNSFAEY 36.49607 585.260119616985 651811.8125 6587.0 ENSG00000215012|ENST00000328554|RTL10 5.01526935895284 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6602 36.505 511.0 170820.0 25 0 12297.0 + 28840 QAFIHNSL 8 145 465.2452720104316 928.4759910876631 2 465.2455932497978 MULTI CID FTMS 0 0 0 6587 82923.4921875 1.0 0 0.0 15 Unmodified _QAFIHNSL_ ENSG00000225921|ENST00000451315|NOL7 28.486842064014134 0.4448922141344407 1 [HV]NN[{M(Oxidation (M))|F}V]S{I|L} 8 6 + 33.237 0.0 0.0 3.5797 3.5797 75.284 0.0 0.0 0.0 6.431218991068512 5.2827377716704405 5.2827377716704405 5.2827377716704405 0 0.4247425010840047 0.0 0.2614393726401688 0.0 [HV]NN[{M(Oxidation (M))|F}V]S{I|L};[HV]NN[{M(Oxidation (M))|F}V]TV;[QA][HQ][{M(Oxidation (M))|F}V]S{I|L};[HV]GGN[{M(Oxidation (M))|F}V]S{I|L};[HV]NGG[{M(Oxidation (M))|F}V]S{I|L};[QA][HQ][{M(Oxidation (M))|F}V]TV;[HV]GGN[{M(Oxidation (M))|F}V]TV;[HV]NGG[{M(Oxidation (M))|F}V]TV;[HV]NNVVT{M(Oxidation (M))|F};[QA][HQ]VVT{M(Oxidation (M))|F} 3.5797;3.0108;2.8871;2.5822;2.5822;2.3181;2.0132;2.0132;1.855;1.1623 -;-;-;-;-;-;-;-;-;- 145 + 1 2.118 73098.1 1.0 3154 3446 6587 DOHH2_400M_050219_1,6602 DOHH2_400M_050219_1,6602,QAFIHNSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6603 36.508 92.0 747920.0 25 0 85333.0 + 8376 ESDSRQIFY 9 84 572.7672209856933 1143.5198890381864 2 572.7668945193291 MULTI CID FTMS 0 0 0 6587 302241.125 0.5923367187710048 -1 0.108917236328125 16 Unmodified _ESDSRQIFY_ ENSG00000145740|ENST00000396591|SLC30A5;ENST00000507354.5_1_5:68398890-68419336:+|nuORF;nc|ENSG00000145740|Q8TAD4-2|SLC30A5 66.45667989310934 0.0225072657982126 1 E{I|L}{M(Oxidation (M))|F}Y 4 5 47.907 0.0 0.0 4.1895 0.0 0.0 573.2505970685562 0.0 573.2505970685562 0.0 25.68881289407813 0.0 0.0 0 1.0 0.0 1.5 0.0 E{I|L}{M(Oxidation (M))|F}Y 4.1895 - 82 1 2.118 55458.7 1.0 3155 3446 6587 DOHH2_400M_050219_1,6603 DOHH2_400M_050219_1,6603,ESDSRQIFY True True ESDSRQIFY 36.508264 572.766894519329 3150226.25 6587.0 ENSG00000145740|ENST00000396591|SLC30A5;;nc|ENSG00000145740|Q8TAD4-2|SLC30A5;;ENST00000507354.5_1_5:68398890-68419336:+|nuORF 7.382712523142497 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6604 36.522 800.0 66152.0 25 0 17250.0 -1 0 45 1094.1227058689965 3279.34628820719 3 1094.457934558392 MULTI CID FTMS 0 0 0 6587 143076.609375 1.0 0 0.0 17 1 S 1 -1 6.9897 0.0 0.0 0.21314 0.0 0.0 2443.0026735605084 746.2935885065061 3189.2962620670146 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.21314 - 13 + 1 2.118 54796.0 0.5299999713897705 3156 3446 6587 DOHH2_400M_050219_1,6604 DOHH2_400M_050219_1,6604, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6606 36.528 67.0 557410.0 25 0 41577.0 + 2686 ATEDPWKTNY 10 67 612.7803233429337 1223.5460937526673 2 612.7806274294853 MULTI CID FTMS 0 0 0 6605 576305.4375 0.0213719591971873 4 -0.3925857543945312 1 Unmodified _ATEDPWKTNY_ ENSG00000139684|ENST00000378720|ESD 32.78568957990786 0.2337485590374503 1 [WP]KTDY 6 5 39.13 0.0 0.0 3.1981 0.0 0.0 0.0 430.1525140009673 430.1525140009673 14.956130378462472 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [WP]KTDY 3.1981 - 109 1 2.13 34513.8 1.0 3157 3447 6605 DOHH2_400M_050219_1,6606 DOHH2_400M_050219_1,6606,ATEDPWKTNY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6607 36.53 93.0 679550.0 25 0 100680.0 20545 LLLTLVEVII 10 90 375.9203013786506 1124.739074736152 3 375.9203063845634 MULTI CID FTMS 0 0 0 6605 329675.03125 0.1420114017257393 2 -0.16461181640625 2 Unmodified _LLLTLVEVII_ ENSG00000170412|ENST00000392627|GPRC5C;nc|ENSG00000170412|Q9NQ84-2|GPRC5C 12.174745833636583 0.6432616012102976 1 V{I|L}{I|L} 3 7 26.599 0.0 0.0 2.3649 0.0 0.0 781.4906265049322 0.0 781.4906265049322 0.0 17.619478172486467 0.0 0.0 0 0.6421590589602533 0.0 0.0 0.0 + V{I|L}{I|L} 2.3649 + + 15 1 2.13 56938.8 1.0 3158 3447 6605 DOHH2_400M_050219_1,6607 DOHH2_400M_050219_1,6607,LLLTLVEVII False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6608 36.531 44.0 1541200.0 25 0 200710.0 + 6286 DVDIRKDLY 9 73 568.8010948317761 1135.5876367303522 2 568.8014404177666 MULTI CID FTMS 0 0 0 6605 1124674.75 0.4061034783704511 -1 0.1278648376464843 3 Unmodified _DVDIRKDLY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP 55.24861242081279 0.0288621114503864 1 DVD{I|L}[WK]VVY 9 3 + 65.568 0.0 0.0 5.7739 5.7739 91.328 0.0 0.0 0.0 17.9390028798052 3.7135567771539257 3.7135567771539257 25.01181001601921 0 1.2614393726401687 2.0 0.3494850021680094 0.3807196863200844 DVD{I|L}[WK]VVY;{NN|[MP]|[D{I|L}]|[EV]}[RK]DVD{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}[RK]{I|L}D[DV]Y;{NN|[MP]|[D{I|L}]|[EV]}[RK]D{I|L}[DV]Y;[PA]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KS]VD{I|L}Y 5.7739;3.5714;2.6065;2.3415;0.56051 -;-;-;-;- 196 + 1 2.13 58640.6 1.0 3159 3447 6605 DOHH2_400M_050219_1,6608 DOHH2_400M_050219_1,6608,DVDIRKDLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6609 36.532 59.0 1028300.0 25 0 196900.0 + 16255 IVSAQNLLK 9 70 493.3058668475638 984.5971807619276 2 493.3058044314384 MULTI CID FTMS 0 0 0 6605 919643.75 1.0 0 0.0 4 Unmodified _IVSAQNLLK_ L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;nc|ENSG999|O00370|L1_ORF2 34.40172386719151 0.1061884637610825 1 {I|L}VSAQQV{I|L}K 9 2 + 67.841 0.0 0.0 6.8902 6.8902 90.582 0.0 0.0 0.0 49.90372600353631 4.881835290187553 4.881835290187553 9.208187539523747 0 0.7429928190999391 2.0 0.4247425010840047 0.0 {I|L}VSAQQV{I|L}K;{I|L}VSA[AG]QV{I|L}K 6.8902;5.955 -;- 115 + 1 2.13 51151.0 1.0 3160 3447 6605 DOHH2_400M_050219_1,6609 DOHH2_400M_050219_1,6609,IVSAQNLLK True True IVSAQNLLK 36.532361 493.305804431438 4848135.0 6605.0 nc|ENSG999|O00370|L1_ORF2;;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;;L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense 4.483660697937012 2.0 True 9.0 False ERV PXD020620_cell_line DOHH2_400M_050219_1 6610 36.534 94.0 716660.0 25 0 174240.0 + -1 FSKGCKGCEY 10 89 393.5039443634665 1177.4900036905997 3 393.5037109255791 MULTI CID FTMS 0 0 0 6605 516988.0 0.7547641257174965 -1 0.1278648376464843 5 Carbamidomethyl (C) _FSKGCKGC(Carbamidomethyl (C))EY_ REV__ENSG00000083817|ENST00000196489|ZNF416 5.047519993296601 0.7032887582948335 1 Y 1 -1 15.485 0.0 0.0 1.315 0.0 0.0 996.4159202939182 0.0 996.4159202939182 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.315 + + 116 + 1 2.13 59851.8 1.0 3161 3447 6605 DOHH2_400M_050219_1,6610 DOHH2_400M_050219_1,6610,FSKGCKGCEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6611 36.537 107.0 830110.0 25 0 89579.0 + 6288 DVDIRKDLY 9 109 379.5366495100702 1135.5881191304106 3 379.5363647341728 MULTI CID FTMS 0 0 0 6605 392624.46875 0.3938653908971954 -1 0.1278648376464843 6 Unmodified _DVDIRKDLY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP 20.580933911654288 0.2795815587326093 1 [DV]D{I|L} 4 5 36.7 0.0 0.0 3.2318 0.0 0.0 0.0 690.3573092096311 690.3573092096311 15.818991719131557 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 + [DV]D{I|L} 3.2318 + + 123 + 1 2.13 78199.1 1.0 3162 3447 6605 DOHH2_400M_050219_1,6611 DOHH2_400M_050219_1,6611,DVDIRKDLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6612 36.539 138.0 393400.0 25 0 18511.0 28638 PVILNTTQI 9 102 499.7973844990249 997.58021606485 2 499.7976867556572 MULTI CID FTMS 0 0 0 6605 255519.328125 1.0 0 0.0 7 Unmodified _PVILNTTQI_ ENSG00000121931|ENST00000369763|LRIF1 26.88365393820708 0.1891292719743517 1 {[QN]|[E{I|L}]|[KN]}G 3 7 27.821 0.0 0.0 2.7889 0.0 0.0 0.0 695.4099944674467 695.4099944674467 10.25306387992712 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.2134679910804404 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}G 2.7889 - 299 1 2.13 45987.8 1.0 3163 3447 6605 DOHH2_400M_050219_1,6612 DOHH2_400M_050219_1,6612,PVILNTTQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6613 36.542 147.0 442800.0 25 0 39753.0 + 9786 FNRPRIETL 9 88 382.55244261747737 1144.6354984526322 3 382.5522643923759 MULTI CID FTMS 0 0 0 6605 244077.875 1.0 0 0.0 8 Unmodified _FNRPRIETL_ ENSG00000183520|ENST00000373014|UTP11;ENST00000488453.1_1_1:38483328-38489297:+|nuORF 18.1463463914782 0.3454829746528889 1 EE{I|L} 3 7 26.471 0.0 0.0 2.3126 0.0 0.0 755.4553609075579 0.0 755.4553609075579 0.0 21.86690318332652 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 EE{I|L} 2.3126 - 54 1 2.13 58687.2 1.0 3164 3447 6605 DOHH2_400M_050219_1,6613 DOHH2_400M_050219_1,6613,FNRPRIETL False True FNRPRIETL 36.542399 382.552264392376 1482083.5 6605.0 ENST00000488453.1_1_1:38483328-38489297:+|nuORF;;ENSG00000183520|ENST00000373014|UTP11 4.96372922261556 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6614 36.55 401.0 409530.0 25 0 86365.0 + 31692 RRMEVYNEF 9 104 622.2981188568995 1242.5816847805988 2 622.2976562380791 MULTI CID FTMS 0 0 0 6605 204880.890625 0.4151324798709909 -1 0.1278648376464843 9 Unmodified _RRMEVYNEF_ ENSG00000178105|ENST00000322536|DDX10;ENST00000417796.1_1_9:84702254-84702629:-|nuORF 57.72198328787511 0.0273433238377839 1 {[ET]|[MV]}[WR]VYN{M(Oxidation (M))|F}E 9 6 + 43.495 0.0 0.0 3.5004 3.5004 69.61 0.0 0.0 0.0 6.306219792008626 20.135351465978232 6.306219792008626 0.8756200458354115 0 0.2887254899964357 0.0 0.4247425010840047 1.924742501084005 {[ET]|[MV]}[WR]VYN{M(Oxidation (M))|F}E;{[ET]|[MV]}[WR]VYNE{M(Oxidation (M))|F};{[ET]|[MV]}ERRYN{M(Oxidation (M))|F}E;{[ET]|[MV]}ERRYNE{M(Oxidation (M))|F};{[ET]|[MV]}[WR]VYGG{M(Oxidation (M))|F}E;[{I|L}T][Q{I|L}]{[ES]|[DT]|[{I|L}C]}YN{M(Oxidation (M))|F}E;{[ET]|[MV]}[WR]VYGGE{M(Oxidation (M))|F};[{I|L}T][Q{I|L}]{[ES]|[DT]|[{I|L}C]}YNE{M(Oxidation (M))|F};{[ET]|[MV]}ERRYGG{M(Oxidation (M))|F}E;{[QS]|[NT]}[SG]RRYN{M(Oxidation (M))|F}E 3.5004;3.4299;3.098;3.0275;2.7593;2.7552;2.6889;2.6847;2.3569;2.3236 -;-;-;-;-;-;-;-;-;- 160 1 2.13 124969.2 1.0 3165 3447 6605 DOHH2_400M_050219_1,6614 DOHH2_400M_050219_1,6614,RRMEVYNEF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6615 36.563 800.0 270150.0 25 0 18768.0 + 20139 LKPGILPVPK 10 200 531.3576357182029 1060.7007185032055 2 531.3577758669853 MULTI CID FTMS 0 0 0 6605 138352.90625 0.0321065469989015 7 -0.7690773010253906 10 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 28.23362336080872 0.3343390635154222 1 K{I|L}AP{I|L}VKD{I|L} 9 -1 72.622 0.0 0.0 6.8466 0.0 0.0 0.0 80.05121027164296 80.05121027164296 52.87912981360804 0.0 0.0 0.0 0 2.0 0.494850021680094 1.079689690656103 0.0 K{I|L}AP{I|L}VKD{I|L} 6.8466 - 750 + 1 2.13 168837.2 0.6399999856948853 3166 3447 6605 DOHH2_400M_050219_1,6615 DOHH2_400M_050219_1,6615,LKPGILPVPK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6616 36.568 255.0 429450.0 25 0 38980.0 + 8134 EPLAKKIF 8 107 473.2919545509585 944.5693561687168 2 473.2922851443291 MULTI CID FTMS 0 0 0 6605 135159.375 0.1533953062050637 -2 0.2367820739746093 11 Unmodified _EPLAKKIF_ ENSG00000218739|ENST00000402297|CEBPZOS;ENST00000470216.1_1_2:37426847-37428252:+|nuORF 42.09456458481378 0.1992492688217789 1 EP{I|L}AK{I|L}K{M(Oxidation (M))|F} 8 2 + 69.347 0.0 0.0 7.3417 7.3417 88.812 0.0 0.0 0.0 48.72486274231747 16.40978057358332 16.40978057358332 6.989700043360188 0 0.3252574989159953 1.3010299956639813 0.0 0.0 EP{I|L}AK{I|L}K{M(Oxidation (M))|F};EP{I|L}AKK{I|L}{M(Oxidation (M))|F};EP{I|L}RRK{M(Oxidation (M))|F};EPRR{I|L}K{M(Oxidation (M))|F};EP{I|L}[K{I|L}]AK{M(Oxidation (M))|F};[NP]KAK{I|L}K{M(Oxidation (M))|F};EPRRK{I|L}{M(Oxidation (M))|F};[NP]KAKK{I|L}{M(Oxidation (M))|F};[NP]KRRK{M(Oxidation (M))|F};[NP]K[K{I|L}]AK{M(Oxidation (M))|F} 7.3417;6.6017;5.5018;5.3154;5.2857;4.9353;4.5754;4.1953;3.0954;2.8793 -;+;-;-;-;-;-;-;-;- + 631 + 1 2.13 89616.7 1.0 3167 3447 6605 DOHH2_400M_050219_1,6616 DOHH2_400M_050219_1,6616,EPLAKKIF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6617 36.582 800.0 239290.0 25 0 21988.0 + 29058 QELDSTDGAKVF 12 162 655.3172272646303 1308.6199015960606 2 655.3171874880791 MULTI CID FTMS 0 0 0 6605 130213.1328125 0.3938313771347158 -1 0.1278648376464843 12 Oxidation (M) _QEISSQTLEKM(Oxidation (M))_ nc|ENSG00000100883|P61011-2|SRP54;ENSG00000100883|ENST00000216774|SRP54 67.08073823543168 0.0408645806987127 1 QE{I|L}DSTDQKV{M(Oxidation (M))|F} 11 5 + 92.961 0.0 0.0 7.1038 7.1038 84.698 0.0 0.0 0.0 30.713337517843648 14.190166918179614 14.190166918179614 3.388185565533803 0 1.1549471895720984 1.6989700043360187 0.3054621874040891 0.0 QE{I|L}DSTDQKV{M(Oxidation (M))|F};QE{I|L}DSTDGAKV{M(Oxidation (M))|F};QE{I|L}DS[R{I|L}]N{[MG]|[TS]}{M(Oxidation (M))|F};QE{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}D]|MM}KV{M(Oxidation (M))|F};[AG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D{[YC]|[HE]}KV{M(Oxidation (M))|F};[AG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}DVK{[YC]|[HE]}{M(Oxidation (M))|F};[AG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HNDQKV{M(Oxidation (M))|F};[AG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}VKD{[YC]|[HE]}{M(Oxidation (M))|F};[AG][PG]KAGN[QP]SYY;[AG][PG]KAGNKD[MT]Y 7.1038;6.8448;5.0627;4.6645;3.7721;3.4109;3.3019;3.279;3.1712;3.1648 -;-;-;-;-;-;-;-;-;- 12204 + 1 2.13 144336.4 0.6800000071525574 3168 3447 6605 DOHH2_400M_050219_1,6617 DOHH2_400M_050219_1,6617,QEISSQTLEKM True False QELDSTDGAKVF 36.581984 655.317187488079 1751600.625 6605.0 nc|ENSG00000100883|P61011-2|SRP54;;ENSG00000100883|ENST00000216774|SRP54 8.881258805592855 2.0 False 12.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6618 36.591 518.0 222280.0 25 0 16362.0 22941 LSEPSSLQY 9 153 512.2525529328153 1022.4905529324308 2 512.2523681521416 MULTI CID FTMS 0 0 0 6605 128103.71875 0.0990650715281639 2 -0.16461181640625 13 Unmodified _LSEPSSLQY_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 18.13498045792455 0.3457906370836843 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NRWKY 7 7 + 28.716 0.0 0.0 2.8084 2.8084 70.927 0.0 0.0 0.0 3.0102999566398125 9.406913626613257 3.0102999566398125 3.0102999566398125 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NRWKY;{[QG]|[NA]}WRWKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{[RE]|[WV]}GKY;{[QG]|[NA]}W{[RE]|[WV]}GKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N[VG]WKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GGRWKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WR]GGKY;{[QG]|[NA]}W[VG]WKY;{[QG]|[NA]}{[DA]|[EG]}RWKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GG{[RE]|[WV]}GKY 2.8084;2.514;2.2851;1.9907;1.8959;1.8959;1.6462;1.6015;1.6015;1.3793 -;-;-;-;-;-;-;-;-;- 457 + 1 2.13 91030.4 1.0 3169 3447 6605 DOHH2_400M_050219_1,6618 DOHH2_400M_050219_1,6618,LSEPSSLQY False True GEANGVWKY 36.591118 512.252368152142 2190423.25 6605.0 ENST00000495312.1_1_2:27255799-27258254:+|nuORF;;ENSG00000119777|ENST00000238788|TMEM214;;nc|ENSG00000119777|Q6NUQ4-2|TMEM214 4.696919997533162 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6619 36.598 285.0 486230.0 25 0 31711.0 + 31693 RRMEVYNEF 9 128 415.2013925991109 1242.5823483975328 3 415.2014037966728 MULTI CID FTMS 0 0 0 6605 95114.5859375 0.461269747621147 -1 0.1278648376464843 14 Unmodified _RRMEVYNEF_ ENSG00000178105|ENST00000322536|DDX10;ENST00000417796.1_1_9:84702254-84702629:-|nuORF 39.94969957227396 0.0757326808254658 1 {[ET]|[MV]}[WR]VYNE{M(Oxidation (M))|F} 9 4 + 58.522 0.0 0.0 4.7097 4.7097 78.381 0.0 0.0 0.0 5.993624753846092 43.82962806725317 5.993624753846092 4.744237387763093 0 0.3807196863200844 0.0 0.0 1.885151878060192 {[ET]|[MV]}[WR]VYNE{M(Oxidation (M))|F};{[ET]|[MV]}[{I|L}A]EKYNE{M(Oxidation (M))|F};{[ET]|[MV]}[WR]VYGGE{M(Oxidation (M))|F};{[ET]|[MV]}[{I|L}A]{[SA]|[TG]}VYNE{M(Oxidation (M))|F};{[ET]|[MV]}[{I|L}A]EKYGGE{M(Oxidation (M))|F} 4.7097;4.3279;3.9687;3.5936;3.5904 -;-;-;-;- 184 1 2.13 111435.6 1.0 3170 3447 6605 DOHH2_400M_050219_1,6619 DOHH2_400M_050219_1,6619,RRMEVYNEF True True RRMEVYNEF 36.597526 415.201403796673 1201101.375 6605.0 ENST00000417796.1_1_9:84702254-84702629:-|nuORF;;ENSG00000178105|ENST00000322536|DDX10 6.769517580668132 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6620 36.611 800.0 132810.0 25 0 12726.0 + 23125 LSPLGYACL 9 142 468.7477144720151 935.4808760108302 2 468.7474243044853 MULTI CID FTMS 0 0 0 6605 106165.671875 1.0 0 0.0 15 Unmodified _LSPLGYACL_ REV__ENSG00000144445|ENST00000281772|KANSL1L;REV__nc|ENSG00000144445|A0AUZ9-2|KANSL1L 23.1484247019978 0.2366544122328345 1 {I|L} 1 -1 12.218 0.0 0.0 1.3061 0.0 0.0 804.3858270379772 0.0 804.3858270379772 0.0 0.4357508785945008 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3061 + + 45 + 1 2.13 84466.5 0.4799999892711639 3171 3447 6605 DOHH2_400M_050219_1,6620 DOHH2_400M_050219_1,6620,LSPLGYACL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6622 36.617 54.0 916590.0 25 0 117140.0 + 14823 ILFGHNTI 8 87 457.75644405653793 913.498335179876 2 457.7564269900322 MULTI CID FTMS 0 0 0 6621 1010462.5 0.4235171164057256 1 -0.0753860473632812 1 Unmodified _ILFGHNTI_ REV__ENSG00000132256|ENST00000380034|TRIM5 14.581692164780916 0.6954967302934248 1 RNVGNT{I|L} 7 -1 36.018 0.0 0.0 3.9429 0.0 0.0 141.07916457343907 0.0 141.07916457343907 0.0 10.369704042775036 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 RNVGNT{I|L} 3.9429 - 177 1 2.144 43677.8 1.0 3172 3448 6621 DOHH2_400M_050219_1,6622 DOHH2_400M_050219_1,6622,ILFGHNTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6623 36.62 174.0 253080.0 25 0 11736.0 + 38596 TTDPYLTNSY 10 90 587.7664475260331 1173.518342118866 2 587.7670776247978 MULTI CID FTMS 0 0 0 6621 295164.78125 0.2355391143725928 2 -0.200836181640625 2 Unmodified _TTDPYLTNSY_ ENSG00000182022|ENST00000435907|CHST15;nc|ENSG00000182022|Q7LFX5-2|CHST15 47.74868867922204 0.0933642699623533 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}T{[ES]|[DT]|[{I|L}C]}T 7 5 31.092 0.0 0.0 2.6494 0.0 0.0 0.0 379.12683756247856 379.12683756247856 8.300055592306474 0.0 0.0 0.0 0 0.2887254899964357 1.2218487496163564 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}T{[ES]|[DT]|[{I|L}C]}T 2.6494 - 201 1 2.144 42208.6 1.0 3173 3448 6621 DOHH2_400M_050219_1,6623 DOHH2_400M_050219_1,6623,TTDPYLTNSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6624 36.622 84.0 710580.0 25 0 140930.0 -1 FSLERTCCY 9 78 589.7520752838965 1177.4895976345929 2 589.7524291872978 MULTI CID FTMS 0 0 0 6621 622392.5625 1.0 0 0.0 3 Carbamidomethyl (C) _FSLERTC(Carbamidomethyl (C))CY_ ENSG00000012171|ENST00000616701|SEMA3B;nc|ENSG00000012171|Q13214-2|SEMA3B 14.838274106304384 0.4350285940865338 1 DSE 3 -1 33.94 0.0 0.0 2.8824 0.0 0.0 828.3618845694228 0.0 828.3618845694228 0.0 17.90939380995489 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 DSE 2.8824 - 43 1 2.144 50245.7 1.0 3174 3448 6621 DOHH2_400M_050219_1,6624 DOHH2_400M_050219_1,6624,FSLERTCCY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6625 36.624 97.0 554080.0 25 0 47793.0 + 13122 HEVPYTTSF 9 86 540.7533881327388 1079.4922233322775 2 540.7536498904228 MULTI CID FTMS 0 0 0 6621 515128.0 0.7987499955178389 -1 0.0892257690429687 4 Unmodified _HEVPYTTSF_ ENSG00000119638|ENST00000238616|NEK9;ENST00000556170.5_1_14:75553702-75572727:-|nuORF;ENST00000557026.5_1_14:75551269-75572727:-|nuORF 71.13359017698441 0.0206607516130725 1 {[YC]|[HE]}VPYTTS{M(Oxidation (M))|F} 9 0 + 59.904 0.0 0.0 5.5493 5.5493 91.245 0.0 0.0 0.0 12.777172647677006 38.9184760012771 12.777172647677006 42.8749925880816 0 1.242992819099939 0.0 1.6382104921644451 0.0 + + {[YC]|[HE]}VPYTTS{M(Oxidation (M))|F};{[CP]|[EA]}[PG][RD]TTS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS][Y{M(Oxidation (M))|F}]VS{M(Oxidation (M))|F};[WQ]G[WP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F};{[MG]|[TS]}{[ET]|[MV]}[Y{M(Oxidation (M))|F}]VS{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[SA]|[TG]}[Y{M(Oxidation (M))|F}]VS{M(Oxidation (M))|F} 5.5493;1.5775;1.3711;0.8954;0.84757;0.30124 +;-;-;-;-;- + 214 1 2.144 45952.7 1.0 3175 3448 6621 DOHH2_400M_050219_1,6625 DOHH2_400M_050219_1,6625,HEVPYTTSF True True HEVPYTTSF 36.624021 540.753649890423 3644068.5 6621.0 ENST00000557026.5_1_14:75551269-75572727:-|nuORF;;ENSG00000119638|ENST00000238616|NEK9;;ENST00000556170.5_1_14:75553702-75572727:-|nuORF 9.311381657918297 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6626 36.627 149.0 376600.0 25 0 48403.0 -1 0 67 909.0605637624144 2724.1598618874427 3 909.3948242068292 MULTI CID FTMS 0 0 0 6621 477798.6875 0.5143705977401354 -1 0.0892257690429687 5 1 [YG]S[WP]CQQA 9 -1 35.217 0.0 0.0 1.2928 0.0 0.0 0.0 1700.7222629022742 1700.7222629022742 23.27841307559951 0.0 0.0 0.0 0 0.0 2.0 1.0356668758921828 0.0 [YG]S[WP]CQQA 1.2928 - 1055 1 2.144 45130.5 1.0 3176 3448 6621 DOHH2_400M_050219_1,6626 DOHH2_400M_050219_1,6626, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6627 36.631 181.0 293840.0 25 0 42815.0 27909 PLSTGKVP 8 94 399.73859184063866 797.4626307480773 2 399.7384521365166 MULTI CID FTMS 0 0 0 6621 227984.03125 0.4489290513808089 5 -0.5631065368652344 6 Unmodified _PLSTGKVP_ ENST00000257570.9_1_12:121458212-121458344:-|nuORF 2.577480529830294 0.808687252328423 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.144 47685.0 1.0 3177 3448 6621 DOHH2_400M_050219_1,6627 DOHH2_400M_050219_1,6627,PLSTGKVP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6628 36.637 364.0 341000.0 25 0 33898.0 + 2593 TADVHGLYY 9 141 519.248798237515 1036.4830435418298 2 519.7482177615166 MULTI CID FTMS 0 0 0 6621 187668.71875 0.4284672415570628 -1 0.0892257690429687 7 Unmodified _ASNAIGTSTCL_ ENST00000476493.5_1_1:33099602-33116090:-|nuORF 12.240655878213236 0.7805268987462184 1 [HV]DG{I|L}ATG[HM] 10 9 + 37.599 0.0 0.0 3.6275 3.6275 69.972 0.0 0.0 0.0 3.827862308715588 21.16789272610392 3.827862308715588 0.9074314547119328 0 0.0 0.0 0.5994850021680094 0.0 [HV]DG{I|L}ATG[HM];[HV]DGAT{I|L}G[HM];[HV]DATG{I|L}G[HM];[HV]DAVATG[HM];[TA]DG[HV]{I|L}G[HM];[HV]DGA{I|L}TG[HM];[HV]DAGT{I|L}G[HM];[HV]DQT{I|L}G[HM];[TA]D[RH]{I|L}G[HM];[TA]D[HV]G{I|L}G[HM] 3.6275;3.54;3.2054;3.0467;3.0433;2.9973;2.9591;2.9098;2.8734;2.8292 -;-;-;-;-;-;-;-;-;- 5101 1 2.144 98066.4 1.0 3178 3448 6621 DOHH2_400M_050219_1,6628 DOHH2_400M_050219_1,6628,ASNAIGTSTCL False False TADVHGLYY 36.637086 519.748217761517 2643529.5 6621.0 ENST00000476493.5_1_1:33099602-33116090:-|nuORF 8.111405531565348 2.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 6629 36.642 275.0 327310.0 25 0 42991.0 + 9021 FDMKPKHLL 9 121 376.8784926611805 0 376.8791992068291 PEAK CID FTMS 0 0 0 6621 130078.765625 1.0 0 0.0 8 Unmodified _FDMKPKHLL_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 16.942295170755138 0.2326366549411506 1 K 1 8 4.6041 0.0 0.0 0.61246 0.0 0.0 148.3581683284172 472.2681591914909 620.626327519908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.61246 + + 21 + 1 2.144 75283.3 1.0 3179 3448 6621 DOHH2_400M_050219_1,6629 DOHH2_400M_050219_1,6629,FDMKPKHLL False True FDMKPKHLL 36.642153 376.879199206829 736939.625 6621.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 2.9903891881306968 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6630 36.653 610.0 230620.0 25 0 9977.6 + + 14468 GEAVEVIHKL 10 168 546.8115535564751 1091.6085541797502 2 547.8142578005791 MULTI CID FTMS 0 0 0 6621 115167.34375 1.0 0 0.0 9 Unmodified _IGAMIIALAGY_ chr7:75157970-75160671|41|64.46|0.78|6.37|-|1|NCF1C,None|1;ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74197704-74202433:+|nuORF;nc|ENSG00000290838|A6NI72|NCF1B;ENST00000486097.1_1_7:74197824-74199646:+|nuORF;nc|ENSG00000165178|A8MVU1|NCF1C 10.823927491677226 0.8099964156050846 1 AVEV{I|L}HK{I|L} 8 -1 39.162 0.0 0.0 3.5876 0.0 0.0 184.06095419976515 0.0 184.06095419976515 0.0 6.766548441099012 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.1747425010840047 AVEV{I|L}HK{I|L} 3.5876 - 1007 + 1 2.144 107654.4 1.0 3180 3448 6621 DOHH2_400M_050219_1,6630 DOHH2_400M_050219_1,6630,IGAMIIALAGY False False GEAVEVIHKL 36.652813 547.814257800579 1484393.125 6621.0 chr7:75157970-75160671|41|64.46|0.78|6.37|-|1|NCF1C,None|1;;ENSG00000158517|ENST00000289473|NCF1;;ENST00000398421.6_1_7:74197704-74202433:+|nuORF;;nc|ENSG00000290838|A6NI72|NCF1B;;ENST00000486097.1_1_7:74197824-74199646:+|nuORF;;nc|ENSG00000165178|A8MVU1|NCF1C 6.291823546091716 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6631 36.667 800.0 86333.0 25 0 9750.9 + 20257 LLDPSQKNLY 10 111 595.8246148009144 1189.6346766686288 2 595.8240844607353 MULTI CID FTMS 0 0 0 6621 114840.65625 0.0957392813925967 2 -0.200836181640625 10 Unmodified _LLDPSQKNLY_ ENSG00000132010|ENST00000334213|ZNF20;ENSG00000196418|ENST00000543802|ZNF124;ENSG00000196646|ENST00000343979|ZNF136;ENSG00000198040|ENST00000539354|ZNF84;ENSG00000198551|ENST00000361113|ZNF627;ENSG00000223547|ENST00000439326|ZNF844;ENSG00000257446|ENST00000547628|ZNF878;ENSG00000257591|ENST00000439556|ZNF625;ENSG00000277462|ENST00000366503|ZNF670;ENST00000464860.1_1_19:12296590-12298813:+|nuORF;ENST00000476676.1_1_19:12296653-12296758:+|nuORF;ENST00000478942.5_1_19:12246557-12251057:-|nuORF;ENST00000480770.5_3_19:12241465-12247683:-|nuORF;ENST00000539098.5_1_12:133618053-133624816:+|nuORF;ENST00000543124.1_1_12:133624462-133624816:+|nuORF;nc|ENSG00000196418|Q15973-4|ZNF124;nc|ENSG00000196418|Q15973-5|ZNF124;nc|ENSG00000214189|Q6ZQV5-2|ZNF788P;nc|ENSG00000214189|Q6ZQV5|ZNF788P 49.55428908609986 0.0827668555218455 1 {I|L}{I|L}DP{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}Y 10 4 + 53.166 0.0 0.0 4.4691 4.4691 74.996 0.0 0.0 0.0 35.95483957839335 1.694148555349564 1.694148555349564 2.698405410982616 0 1.3494850021680094 2.0 0.0 0.3807196863200844 {I|L}{I|L}DP{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}Y;{I|L}{I|L}DP[VP]DK{M(Oxidation (M))|F}{M(Oxidation (M))|F};{I|L}{I|L}D[RD]S[VP]{I|L}Y;{I|L}{I|L}DPR[WP]{M(Oxidation (M))|F}{M(Oxidation (M))|F};{I|L}{I|L}DP[VP]KD{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QS]|[NT]}PKN{I|L}D{I|L}{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}N{I|L}D{I|L}{I|L}Y;{I|L}{I|L}[YT]YE{I|L}{I|L}Y;{[QS]|[NT]}PKND{I|L}{I|L}{I|L}Y;{[QS]|[NT]}PKGG{I|L}D{I|L}{I|L}Y 4.4691;4.2423;4.216;4.1327;3.9892;3.5506;3.2569;3.1282;2.8762;2.7803 -;-;-;-;-;-;-;-;-;- 479 + 1 2.144 51849.3 0.6200000047683716 3181 3448 6621 DOHH2_400M_050219_1,6631 DOHH2_400M_050219_1,6631,LLDPSQKNLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6632 36.679 738.0 380730.0 25 0 29983.0 + 32744 SEDGAIHVI 9 194 470.7405501461161 939.4665473590322 2 470.7404968142509 MULTI CID FTMS 0 0 0 6621 116662.8515625 0.4268651711794842 -1 0.0892257690429687 11 Unmodified _SEDGAIHVI_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 63.562846038646086 0.0241094678104353 1 {[ES]|[DT]|[{I|L}C]}DGA{I|L}HV{I|L} 9 0 + 21.459 0.0 0.0 2.2842 2.2842 66.521 0.0 0.0 0.0 1.5096655516560062 5.613397528597108 1.5096655516560062 0.4575749056067515 0 1.0189301784845295 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}DGA{I|L}HV{I|L};{[ES]|[DT]|[{I|L}C]}DQ{I|L}HV{I|L};{[ES]|[DT]|[{I|L}C]}DGA[HV]{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}DQ[HV]{I|L}{I|L} 2.2842;2.2355;0.40454;0.35584 +;-;-;- + 298 + 1 2.144 213908.6 1.0 3182 3448 6621 DOHH2_400M_050219_1,6632 DOHH2_400M_050219_1,6632,SEDGAIHVI True True SEDGAIHVI 36.67943 470.740496814251 1502859.0 6621.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 4.958234786987305 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6633 36.687 409.0 143160.0 25 0 8697.1 + 4005 DALRSGLTV 9 103 466.2646467642657 930.5147405953314 2 466.2650024294853 MULTI CID FTMS 0 0 0 6621 103000.9296875 0.9684542679439904 -1 0.0892257690429687 12 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 32.78568957990786 0.1150597335874693 1 {[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 9 5 + 39.159 0.0 0.0 4.2083 4.2083 76.898 0.0 0.0 0.0 3.713556777153933 24.55477560111604 3.713556777153933 4.83960679249968 0 0.5 0.8538719643217619 0.4247425010840047 0.0 {[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[DA]|[EG]}[R{I|L}][SG]{I|L}TV;{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}[SG]{I|L}TV;{[SA]|[TG]}[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[DA]|[EG]}[R{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;{[DA]|[EG]}[R{I|L}][KT]EV;{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}[KT]EV 4.2083;3.6882;3.2724;3.1564;2.992;2.5762;2.1312;1.7153 -;+;-;-;-;-;-;- + 122 1 2.144 48271.4 1.0 3183 3448 6621 DOHH2_400M_050219_1,6633 DOHH2_400M_050219_1,6633,DALRSGLTV True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6635 36.692 107.0 474750.0 25 0 64181.0 + 45415 YTDFDGTRVY 10 58 618.7803409723612 1235.5461290115222 2 618.7805053591728 MULTI CID FTMS 0 0 0 6634 359291.9375 0.1640383174806199 2 -0.2279739379882812 1 Unmodified _YTDFDGTRVY_ ENSG00000102096|ENST00000376509|PIM2;ENSG00000137193|ENST00000373509|PIM1;ENSG00000198355|ENST00000360612|PIM3;nc|ENSG00000137193|P11309-2|PIM1 40.23920728925047 0.1550410903091231 1 YTD{M(Oxidation (M))|F}DY 6 4 74.954 0.0 0.0 6.0664 0.0 0.0 0.0 428.2196444147094 428.2196444147094 60.34949089312384 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3807196863200844 0.0 YTD{M(Oxidation (M))|F}DY 6.0664 - 52 + 1 2.144 44725.4 1.0 3184 3449 6634 DOHH2_400M_050219_1,6635 DOHH2_400M_050219_1,6635,YTDFDGTRVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6636 36.694 99.0 425750.0 25 0 32468.0 + 32880 SEIENVHGF 9 86 516.2433987391904 1030.4722445451807 2 516.2435790896416 MULTI CID FTMS 0 0 0 6634 375271.53125 0.2562104206627908 2 -0.2279739379882812 2 Unmodified _SEIENVHGF_ ENSG00000075711|ENST00000667157|DLG1;ENST00000471733.5_1_3:196807912-197024075:-|nuORF;ENST00000485409.5_1_3:196921289-197023334:-|nuORF;nc|ENSG00000075711|Q12959-2|DLG1;nc|ENSG00000075711|Q12959-3|DLG1;nc|ENSG00000075711|Q12959-5|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959|DLG1 25.399314129420983 0.2080152500878129 1 {[ES]|[DT]|[{I|L}C]}{I|L}EGGVC(Carbamidomethyl (C))N 9 5 42.695 0.0 0.0 4.1433 0.0 0.0 0.0 82.0668200128539 82.0668200128539 28.0910920622674 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}EGGVC(Carbamidomethyl (C))N 4.1433 - 264 + 1 2.144 38530.6 1.0 3185 3449 6634 DOHH2_400M_050219_1,6636 DOHH2_400M_050219_1,6636,SEIENVHGF False True SEIENVHGF 36.693717 516.243579089642 15163826.0 6634.0 nc|ENSG00000075711|Q12959-6|DLG1;;nc|ENSG00000075711|Q12959-3|DLG1;;nc|ENSG00000075711|Q12959-2|DLG1;;ENSG00000075711|ENST00000667157|DLG1;;nc|ENSG00000075711|Q12959-7|DLG1;;nc|ENSG00000075711|Q12959-5|DLG1;;ENST00000471733.5_1_3:196807912-197024075:-|nuORF;;ENST00000485409.5_1_3:196921289-197023334:-|nuORF;;nc|ENSG00000075711|Q12959|DLG1 7.289327144622803 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6637 36.696 135.0 474910.0 25 0 90075.0 + 15997 ITDSAGHILY 10 97 545.2826894321944 1088.550825931189 2 545.2827026247978 MULTI CID FTMS 0 0 0 6634 385810.125 0.1834220071631593 -1 0.0753860473632812 3 Unmodified _ITDSAGHILY_ ENSG00000170348|ENST00000303575|TMED10 35.61225514009592 0.2039006631696762 1 [{I|L}T][HN]DT{I|L} 7 7 52.223 0.0 0.0 4.7975 0.0 0.0 0.0 291.13654461284904 291.13654461284904 37.53038204182076 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.0 0.0 [{I|L}T][HN]DT{I|L} 4.7975 - 1075 1 2.144 54022.2 1.0 3186 3449 6634 DOHH2_400M_050219_1,6637 DOHH2_400M_050219_1,6637,ITDSAGHILY False True ITDSAGHILY 36.696461 545.282702624798 23217650.0 6634.0 ENSG00000170348|ENST00000303575|TMED10 4.283276398976644 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6638 36.699 142.0 482920.0 25 0 53134.0 11338 GFGVAIVG 8 120 360.2064407080802 718.3983284829604 2 360.2060729861259 MULTI CID FTMS 0 0 0 6634 296143.78125 1.0 0 0.0 4 Unmodified _GFGVAIVG_ ENSG00000161031|ENST00000340880|PGLYRP2;nc|ENSG00000161031|Q96PD5-2|PGLYRP2 2.889219685676258 0.8067950007271085 1 {[TV]|[{I|L}S]}V 3 6 10.19 0.0 0.0 1.4184 0.0 0.0 0.0 416.19063129961984 416.19063129961984 0.2747166779809813 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 {[TV]|[{I|L}S]}V 1.4184 - 33 1 2.144 57521.4 1.0 3187 3449 6634 DOHH2_400M_050219_1,6638 DOHH2_400M_050219_1,6638,GFGVAIVG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6639 36.702 139.0 406430.0 25 0 48424.0 + 36789 TEGGEPYRLY 10 79 592.783112045551 1183.551671157902 2 592.7824584841728 MULTI CID FTMS 0 0 0 6634 207074.5625 1.0 0 0.0 5 Unmodified _TEGGEPYRLY_ ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB 19.361941925380144 0.5226674314761524 1 WG[DP] 4 8 24.693 0.0 0.0 2.0863 0.0 0.0 710.3749404988943 0.0 710.3749404988943 0.0 12.91000098699497 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 WG[DP] 2.0863 - 51 1 2.144 45838.4 1.0 3188 3449 6634 DOHH2_400M_050219_1,6639 DOHH2_400M_050219_1,6639,TEGGEPYRLY False True TEGGEPYRLY 36.702129 592.782458484173 927437.25 6634.0 nc|ENSG00000089597|Q14697-2|GANAB;;ENSG00000089597|ENST00000356638|GANAB 2.6500722964604697 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6640 36.708 321.0 386690.0 25 0 34192.0 + 1010 AGADHIITM 9 142 464.7316379614084 927.4487229896168 2 464.7335388064384 MULTI CID FTMS 0 0 0 6634 210405.890625 0.0264096281769036 -2 0.16461181640625 6 Unmodified _AGADHIITM_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 42.09456458481378 0.0639583784996157 1 {[DA]|[EG]}HGA{I|L}{I|L}TM 9 4 + 70.116 0.0 0.0 7.5601 7.5601 83.211 0.0 0.0 0.0 21.7074145675533 40.26773409864666 21.7074145675533 1.706962271689747 0 1.0 1.3010299956639813 0.805462187404089 0.0 {[DA]|[EG]}HGA{I|L}{I|L}TM;{[DA]|[EG]}HQ{I|L}{I|L}TM;{[DA]|[EG]}HG{I|L}A{I|L}TM;{[DA]|[EG]}{I|L}HQ{I|L}TM;{[DA]|[EG]}H{I|L}Q{I|L}TM;{[DA]|[EG]}{I|L}HGA{I|L}TM;{[DA]|[EG]}H{I|L}GA{I|L}TM;{[DA]|[EG]}HG{I|L}{I|L}ATM;{[DA]|[EG]}{I|L}HG{I|L}ATM;{[DA]|[EG]}H{I|L}G{I|L}ATM 7.5601;7.3761;6.6489;6.4572;6.3472;6.2445;6.1345;5.6704;5.266;5.1559 -;-;-;-;-;-;-;-;-;- 839 1 2.144 95482.7 1.0 3189 3449 6634 DOHH2_400M_050219_1,6640 DOHH2_400M_050219_1,6640,AGADHIITM True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6641 36.711 167.0 395530.0 25 0 42043.0 -1 0 109 398.21411772759296 397.206841260993 1 398.2151977419853 MULTI CID FTMS 0 0 0 6634 200965.328125 0.919671326666711 1 -0.1254501342773437 7 1 P 1 -1 8.9794 0.0 0.0 2.2606 0.0 0.0 282.14301939995624 0.0 282.14301939995624 0.0 8.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.2606 - 4 + 1 2.144 58204.8 1.0 3190 3449 6634 DOHH2_400M_050219_1,6641 DOHH2_400M_050219_1,6641, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6642 36.716 275.0 443230.0 25 0 25877.0 + 591 AEITGEIQQY 10 135 576.2834366634262 1150.5523203936525 2 576.2816039919853 MULTI CID FTMS 0 0 0 6634 221644.296875 0.2541013445061315 -1 0.0753860473632812 8 Unmodified _AEITGEIQQY_ ENSG00000100485|ENST00000216373|SOS2;ENSG00000115904|ENST00000402219|SOS1;nc|ENSG00000100485|Q07890-2|SOS2 69.10491478415734 0.0189654488676922 1 {[QN]|[E{I|L}]|[KN]}ASAE{I|L} 7 7 39.806 0.0 0.0 3.4598 0.0 0.0 0.0 434.1730228685148 434.1730228685148 20.34244385099712 0.0 0.0 0.0 0 0.7302046884880938 1.0969100130080565 1.4447638809191468 0.0 {[QN]|[E{I|L}]|[KN]}ASAE{I|L} 3.4598 - 2035 1 2.144 92244.1 1.0 3191 3449 6634 DOHH2_400M_050219_1,6642 DOHH2_400M_050219_1,6642,AEITGEIQQY True True AEITGEIQQY 36.716317 576.281603991985 4140506.75 6634.0 nc|ENSG00000100485|Q07890-2|SOS2;;ENSG00000115904|ENST00000402219|SOS1;;ENSG00000100485|ENST00000216373|SOS2 5.497063636779785 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6643 36.727 630.0 193500.0 25 0 28742.0 + 19414 LETKLAPA 8 153 421.7516385099368 841.4887240866735 2 421.7512695193291 MULTI CID FTMS 0 0 0 6634 174352.21875 0.3394824188106596 -8 0.8419609069824219 9 Unmodified _LETKLAPA_ REV__nc|ENSG00000149380|Q7Z4N8-3|P4HA3 2.577480529830294 0.808687252328423 1 H 1 -1 9.5329 0.0 0.0 1.1329 0.0 0.0 686.4228346597189 0.0 686.4228346597189 0.0 0.6071108144273119 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.1329 - 18 + 1 2.144 97106.7 1.0 3192 3449 6634 DOHH2_400M_050219_1,6643 DOHH2_400M_050219_1,6643,LETKLAPA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6644 36.735 456.0 265170.0 25 0 25282.0 + 15371 IPNERTMQL 9 127 551.290131480364 1100.565710027528 2 551.2905761599541 MULTI CID FTMS 0 0 0 6634 165364.6875 0.739852038540418 -1 0.0753860473632812 10 Unmodified _IPNERTMQL_ ENSG00000223501|ENST00000445902|VPS52;ENST00000471309.1_1_6:33231312-33232261:-|nuORF;nc|ENSG00000223501|Q8N1B4-2|VPS52 49.55428908609986 0.0413471690215031 1 {I|L}PNEP{I|L}QQ 8 4 71.87 0.0 0.0 6.5302 0.0 0.0 0.0 178.05140100650627 178.05140100650627 47.77453873726023 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 1.1549471895720984 {I|L}PNEP{I|L}QQ 6.5302 - 954 + 1 2.144 101199.2 1.0 3193 3449 6634 DOHH2_400M_050219_1,6644 DOHH2_400M_050219_1,6644,IPNERTMQL True True IPNERTMQL 36.7354 551.290576159954 1883552.0 6634.0 nc|ENSG00000223501|Q8N1B4-2|VPS52;;ENSG00000223501|ENST00000445902|VPS52;;ENST00000471309.1_1_6:33231312-33232261:-|nuORF 5.35647439956665 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6645 36.739 184.0 590720.0 25 0 60934.0 43951 YGNVTSLGY 9 115 487.2352208790363 972.4558888248728 2 487.2343017458916 MULTI CID FTMS 0 0 0 6634 150465.640625 0.1316038049400524 -1 0.0753860473632812 11 Unmodified _YGNVTSLGY_ nc|ENSG00000186448|O14709-2|ZNF197 39.957323273325 0.0756908302845263 1 [YG]{[DA]|[EG]}SK{I|L}GY 9 4 + 59.892 0.0 0.0 6.1588 6.1588 86.963 0.0 0.0 0.0 8.779299643748942 16.478174818886373 8.779299643748942 8.779299643748942 0 1.3494850021680094 1.5228787452803376 1.4749073637206092 0.0 [YG]{[DA]|[EG]}SK{I|L}GY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}V{I|L}GY;[TP][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}{I|L}GY;[KS]D[SG]{M(Oxidation (M))|F}{I|L}GY;[KS]D[YQ]{I|L}GY;[YG]{[DA]|[EG]}{I|L}[KS]GY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}T]GY;[HT]{I|L}[RH]{M(Oxidation (M))|F}Y;{[WT]|[RM]}KA{[DS]|[MA]|[CV]|TT}CY;{[WT]|[RM]}[YQ]RGY 6.1588;5.256;3.9598;3.9293;3.5853;3.3475;3.32;3.0316;2.7896;2.6727 -;-;-;-;-;-;-;-;-;- 436 1 2.144 84367.3 1.0 3194 3449 6634 DOHH2_400M_050219_1,6645 DOHH2_400M_050219_1,6645,YGNVTSLGY True False KSDGSFIGY 36.738944 487.234301745892 13841846.0 6634.0 ENST00000537834.5_1_19:40745726-40771198:-|nuORF;;nc|ENSG00000105221|P31751-2|AKT2;;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;;ENSG00000105221|ENST00000392038|AKT2 3.1435455878575644 2.0 False 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6646 36.743 221.0 339960.0 25 0 14660.0 + 464 AEFRIYKDY 9 113 402.2048983160078 1203.5928655482237 3 402.2033264040947 MULTI CID FTMS 0 0 0 6634 154949.4375 1.0 0 0.0 12 Unmodified _AEFRIYKDY_ ENSG00000101144|ENST00000395863|BMP7 29.081581746732265 0.1611639662936252 1 AEY 3 6 48.302 0.0 0.0 4.0131 0.0 0.0 0.0 837.4268892877561 837.4268892877561 21.03408749299639 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.4247425010840047 0.0 AEY 4.0131 - 239 + 1 2.144 62356.1 1.0 3195 3449 6634 DOHH2_400M_050219_1,6646 DOHH2_400M_050219_1,6646,AEFRIYKDY False True AEFRIYKDY 36.7431 402.203326404095 1027030.5625 6634.0 ENSG00000101144|ENST00000395863|BMP7 3.138393799463908 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6647 36.748 217.0 342960.0 25 0 24704.0 + 13388 HLKLNRISF 9 124 376.5612343567205 1126.6618736703615 3 376.5611144900322 MULTI CID FTMS 0 0 0 6634 122481.5390625 1.0 0 0.0 13 Unmodified _HLKLNRISF_ REV__ENST00000422060.2_1_7:5161504-5161795:-|nuORF 8.745405648335112 0.6093864874670651 1 T{M(Oxidation (M))|F} 2 -1 19.421 0.0 0.0 1.7238 0.0 0.0 860.535727285399 0.0 860.535727285399 0.0 7.202879307350145 0.0 0.0 0 0.4247425010840047 0.0 0.2215141619232908 0.0 T{M(Oxidation (M))|F} 1.7238 - 26 + 1 2.144 64614.0 1.0 3196 3449 6634 DOHH2_400M_050219_1,6647 DOHH2_400M_050219_1,6647,HLKLNRISF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6648 36.762 800.0 160970.0 25 0 6881.2 + 8334 ERQQQQWNVI 10 135 664.8391964739595 1327.663840014719 2 664.8387328982353 MULTI CID FTMS 0 0 0 6634 113583.15625 0.8181324514536036 -1 0.0753860473632812 14 Unmodified _ERQQQQWNVI_ REV__ENSG00000179271|ENST00000316939|GADD45GIP1 26.268140514670165 0.3785003716575977 1 [AG]GSQ{I|L}PSQSANV{I|L} 14 -1 + 116.22 0.0 0.0 8.7534 8.7534 84.541 0.0 0.0 0.0 2.215805054996636 16.667853209646168 2.215805054996636 1.5060720383382744 0 0.5297966019298022 1.3979400086720375 2.416386562212267 1.1237125054200234 [AG]GSQ{I|L}PSQSANV{I|L};[AG]SGQ{I|L}PSQSANV{I|L};{[SA]|[TG]}NQ{I|L}PSQSANV{I|L};{[SA]|[TG]}GGQ{I|L}PSQSANV{I|L};[AG]GSVAAPSQSANV{I|L};[AG]SGVAAPSQSANV{I|L};{[SA]|[TG]}NVAAPSQSANV{I|L};{[QG]|[NA]}SQ{I|L}PSQSANV{I|L};[AG]GVSAAPSQSANV{I|L};{[SA]|[TG]}GGVAAPSQSANV{I|L} 8.7534;8.64;8.5865;8.5218;8.3484;8.2349;8.1798;8.125;8.1216;8.1168 -;-;-;-;-;-;-;-;-;- 4311 1 2.144 96963.1 0.550000011920929 3197 3449 6634 DOHH2_400M_050219_1,6648 DOHH2_400M_050219_1,6648,ERQQQQWNVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6649 36.776 800.0 160550.0 25 0 12107.0 + -1 YLEHGEYEGNLY 12 126 743.8283294619188 1485.6421059906374 2 743.8286010622978 MULTI CID FTMS 0 0 0 6634 110769.4921875 0.6553395971590925 -1 0.0753860473632812 15 Carbamidomethyl (C) _WPC(Carbamidomethyl (C))EYKQCPLY_ nc|ENSG00000108852|Q14168-6|MPP2;nc|ENSG00000108852|Q14168-3|MPP2;ENSG00000108852|ENST00000269095|MPP2;nc|ENSG00000108852|Q14168-2|MPP2;nc|ENSG00000108852|Q14168-4|MPP2;ENSG00000105926|ENST00000222644|PALS2;nc|ENSG00000108852|Q14168|MPP2;nc|ENSG00000108852|Q14168-5|MPP2 10.799506525563784 0.8105043987015127 1 {[QV]|[N{I|L}]|[RA]|[KV]}[WE]GEYEGN{I|L}Y 12 -1 + 81.921 0.0 0.0 5.5142 5.5142 75.815 0.0 0.0 0.0 0.4575749056067479 14.28234009428816 0.4575749056067479 0.4575749056067479 0 0.9247425010840048 1.2218487496163564 0.7302046884880937 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[WE]GEYEGN{I|L}Y;[YE]GH{I|L}EYEGN{I|L}Y;[YE][H{I|L}]GEYEGN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]GEEYGN{I|L}Y;[YE]GH{I|L}EEYGN{I|L}Y;[YE][H{I|L}]GEEYGN{I|L}Y;[NG]EW{I|L}EYEGN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]WYEGN{I|L}Y;[YE][H{I|L}]WYEGN{I|L}Y;[YE]GHE{I|L}YEGN{I|L}Y 5.5142;5.4834;5.4632;5.3116;5.2808;5.2606;5.1311;5.0691;5.0182;5.0129 -;-;-;-;-;-;-;-;-;- 8625 1 2.144 98049.9 0.550000011920929 3198 3449 6634 DOHH2_400M_050219_1,6649 DOHH2_400M_050219_1,6649,WPCEYKQCPLY False False YLEHGEYEGNLY 36.776064 743.828601062298 1441406.875 6634.0 nc|ENSG00000108852|Q14168-6|MPP2;;nc|ENSG00000108852|Q14168-3|MPP2;;ENSG00000108852|ENST00000269095|MPP2;;nc|ENSG00000108852|Q14168-2|MPP2;;nc|ENSG00000108852|Q14168-4|MPP2;;ENSG00000105926|ENST00000222644|PALS2;;nc|ENSG00000108852|Q14168|MPP2;;nc|ENSG00000108852|Q14168-5|MPP2 7.509836832682292 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6650 36.786 576.0 145880.0 25 0 12795.0 + 28459 PTEPYLSSQNY 11 121 649.7981343931779 0 649.7983276247978 PEAK CID FTMS 0 0 0 6634 109333.9921875 1.0 0 0.0 16 Unmodified _PTEPYLSSQNY_ ENSG00000174231|ENST00000304992|PRPF8 27.628801355627647 0.2572500445580473 1 S{I|L} 2 10 5.5732 0.0 0.0 0.42951 0.0 0.0 837.3495105257629 257.09308801822505 1094.442598543988 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S{I|L} 0.42951 - 72 + 1 2.144 67334.3 1.0 3199 3449 6634 DOHH2_400M_050219_1,6650 DOHH2_400M_050219_1,6650,PTEPYLSSQNY False True PTEPYLSSQNY 36.78616 649.798327624798 731467.4375 6634.0 ENSG00000174231|ENST00000304992|PRPF8 6.336410363515218 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6651 36.801 800.0 252940.0 25 0 27402.0 + 25828 NLDIERPTY 9 173 560.7852684062916 1119.5559838793831 2 560.7850219607353 MULTI CID FTMS 0 0 0 6634 105283.4921875 0.6347493966099753 -1 0.0753860473632812 17 Unmodified _NLDIERPTY_ ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENSG00000243910|ENST00000490341|TUBA4B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C 93.16586880292088 0.0136995152735431 1 N{I|L}D{I|L}ERPTY 9 0 + 98.719 0.0 0.0 8.8177 8.8177 95.429 0.0 0.0 0.0 82.85677767823485 12.083880620110676 12.083880620110676 12.09544243948811 0 1.274227503252014 2.0 1.079689690656103 0.2887254899964357 + + N{I|L}D{I|L}ERPTY;N{I|L}D{I|L}E[VG]PTY;N{I|L}D{I|L}ER[DV]{M(Oxidation (M))|F};N{I|L}D{I|L}ER[YT]P;N{I|L}Y{[HG]|PP}RPTY;N{I|L}D{I|L}E[{I|L}P]SGY;N{I|L}D{I|L}E[VG][DV]{M(Oxidation (M))|F};N{I|L}D{I|L}E[VG][YT]P;N{I|L}QQTRPTY;N{I|L}Y{[HG]|PP}[VG]PTY 8.8177;7.7373;7.4567;7.4304;6.524;6.5061;6.3763;6.35;5.9375;5.4437 +;-;-;-;-;-;-;-;-;- + 1086 + 1 2.144 150971.1 0.5 3200 3449 6634 DOHH2_400M_050219_1,6651 DOHH2_400M_050219_1,6651,NLDIERPTY True True NLDIERPTY 36.801166 560.785021960735 1034569.3125 6634.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000127824|ENST00000248437|TUBA4A;;ENSG00000243910|ENST00000490341|TUBA4B;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000152086|ENST00000312988|TUBA3E;;ENSG00000167553|ENST00000301072|TUBA1C;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;ENSG00000167552|ENST00000301071|TUBA1A;;ENSG00000075886|ENST00000321253|TUBA3D;;ENSG00000198033|ENST00000400113|TUBA3C;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000198033|P0DPH7-2|TUBA3C;;nc|ENSG00000127824|P68366-2|TUBA4A 6.174580891927083 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6652 36.807 307.0 358740.0 25 0 30591.0 + 45235 YRQKQVVIL 9 126 382.904246018407 1145.690908655421 3 382.9046203494072 MULTI CID FTMS 0 0 0 6634 98071.8828125 1.0 0 0.0 18 Unmodified _YRQKQVVIL_ ENSG00000143179|ENST00000367879|UCK2 11.494710602746466 0.5255349189887087 1 EQVMV[QT]{I|L}{I|L} 9 6 39.223 0.0 0.0 3.4235 0.0 0.0 86.14641779872461 0.0 86.14641779872461 0.0 26.45877873862564 0.0 0.0 0 0.5 0.0 0.805462187404089 0.3807196863200844 EQVMV[QT]{I|L}{I|L} 3.4235 - 349 + 1 2.144 91481.6 1.0 3201 3449 6634 DOHH2_400M_050219_1,6652 DOHH2_400M_050219_1,6652,YRQKQVVIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6653 36.812 296.0 175450.0 25 0 11983.0 + 7282 EETVVPKTF 9 93 525.2792395027889 1048.5439260723776 2 525.2791015505791 MULTI CID FTMS 0 0 0 6634 91356.3125 0.8306490951098104 -1 0.0753860473632812 19 Unmodified _EETVVPKTF_ ENSG00000147789|ENST00000532777|ZNF7;nc|ENSG00000147789|P17097-2|ZNF7 38.17557092003332 0.0854718145212029 1 EETVVPKT{M(Oxidation (M))|F} 9 0 + 44.859 0.0 0.0 4.2782 4.2782 84.755 0.0 0.0 0.0 18.70822413442737 12.91382186095435 12.91382186095435 16.339577144826052 0 0.5629529932484498 1.6989700043360187 0.4247425010840047 0.0 + + EETVVPKT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[YK]VVT[HC];{[TV]|[{I|L}S]}{[HG]|PP}PVVT[HC];[KP]T{M(Oxidation (M))|F}[WK]{[QD]|[EN]|[WG]|[KD]|[RS]};[VP][TP]PVVT[HC] 4.2782;2.7199;2.5369;1.0143;0.72195 +;-;-;-;- + 148 + 1 2.144 50457.2 1.0 3202 3449 6634 DOHH2_400M_050219_1,6653 DOHH2_400M_050219_1,6653,EETVVPKTF True True EETVVPKTF 36.812189 525.279101550579 733586.5625 6634.0 ENSG00000147789|ENST00000532777|ZNF7;;nc|ENSG00000147789|P17097-2|ZNF7 6.939131418863933 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6655 36.818 106.0 367800.0 25 0 40365.0 + 6287 DVDIRKDLY 9 62 568.8010948317761 1135.5876367303522 2 568.8012573122978 MULTI CID FTMS 0 0 0 6654 292415.8125 0.1055870406860042 2 -0.2296104431152343 1 Unmodified _DVDIRKDLY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP 31.635753872319068 0.1286659907112723 1 DVD{I|L} 4 5 60.477 0.0 0.0 5.3256 0.0 0.0 0.0 690.3595064752561 690.3595064752561 32.734556676018585 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.4247425010840047 0.0 + DVD{I|L} 5.3256 + + 68 + 1 2.157 36703.9 1.0 3203 3450 6654 DOHH2_400M_050219_1,6655 DOHH2_400M_050219_1,6655,DVDIRKDLY False True DVDIRKDLY 36.818316 568.801257312298 29058122.5 6654.0 ENSG00000196604|ENST00000409914|POTEF;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000188219|ENST00000683005|POTEE;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;;ENSG00000196834|ENST00000451531|POTEI;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENSG00000169067|ENST00000423391|ACTBL2;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;;ENSG00000222038|ENST00000409602|POTEJ;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENSG00000075624|ENST00000646664|ACTB 5.934502442677816 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6656 36.824 322.0 267270.0 25 0 14107.0 + 6289 DVDIRKDLY 9 120 379.5366495100702 1135.5881191304106 3 379.5363036990166 MULTI CID FTMS 0 0 0 6654 107177.7890625 0.1075165333403554 2 -0.2296104431152343 2 Unmodified _DVDIRKDLY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP 12.872603262515298 0.4882369880199512 1 [DV]D{I|L} 4 5 31.172 0.0 0.0 2.745 0.0 0.0 0.0 690.3620699518186 690.3620699518186 16.56804392152253 0.0 0.0 0.0 0 0.25 2.0 0.0 0.0 + [DV]D{I|L} 2.745 + + 264 + 1 2.157 73478.0 1.0 3204 3450 6654 DOHH2_400M_050219_1,6656 DOHH2_400M_050219_1,6656,DVDIRKDLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6657 36.825 40.0 1159300.0 25 0 141520.0 + -1 DIGGPLVL 8 89 413.2388644783535 824.463176023507 2 413.2382995486259 MULTI CID FTMS 0 0 0 6654 889269.125 0.6690957939477571 -7 0.7563400268554688 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))DIGGPLVL_ REV__ENSG00000147647|ENST00000351513|DPYS;REV__ENST00000403263.5_1_2:206863772-206864039:-|nuORF 2.889219685676258 0.8067950007271085 1 {I|L} 1 -1 12.218 0.0 0.0 1.482 0.0 0.0 693.368142309443 0.0 693.368142309443 0.0 12.21848749616356 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.482 + + 9 + 1 2.157 42793.5 1.0 3205 3450 6654 DOHH2_400M_050219_1,6657 DOHH2_400M_050219_1,6657,DIGGPLVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6658 36.827 99.0 589980.0 25 0 54933.0 + 7587 EILFIGLAI 9 111 494.8057997729717 987.5970466127436 2 494.8057433962822 MULTI CID FTMS 0 0 0 6654 408446.28125 0.8507567764705132 -1 0.1254501342773437 4 Unmodified _EILFIGLAI_ REV__ENSG00000241973|ENST00000255882|PI4KA;REV__ENST00000485963.5_1_22:21152870-21213097:-|nuORF 12.531546534597751 0.4974689918368763 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[PA]{I|L}{I|L}E 8 -1 21.744 0.0 0.0 2.2017 0.0 0.0 0.0 88.071020571981 88.071020571981 3.78530614985209 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3494850021680094 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[PA]{I|L}{I|L}E 2.2017 - 469 1 2.157 46973.6 1.0 3206 3450 6654 DOHH2_400M_050219_1,6658 DOHH2_400M_050219_1,6658,EILFIGLAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6659 36.831 159.0 782320.0 25 0 133430.0 + 37747 TLRERISAF 9 93 364.8773098435223 1091.6101001307668 3 364.8773071169853 MULTI CID FTMS 0 0 0 6654 362411.3125 0.4764633984508685 -1 0.1254501342773437 5 Unmodified _TLRERISAF_ ENSG00000184661|ENST00000330560|CDCA2 38.17557092003332 0.0854718145212029 1 [{I|L}T]R{[RE]|[WV]}{[TV]|[{I|L}S]}A{M(Oxidation (M))|F} 9 0 + 33.623 0.0 0.0 3.0802 3.0802 81.016 0.0 0.0 0.0 3.190221536660907 10.179921580021094 3.190221536660907 14.815534464597707 0 0.7742275032520141 1.5228787452803376 0.3807196863200844 0.2742275032520141 + + [{I|L}T]R{[RE]|[WV]}{[TV]|[{I|L}S]}A{M(Oxidation (M))|F};[{I|L}T]R{[RE]|[WV]}{[VA]|[{I|L}G]}T{M(Oxidation (M))|F} 3.0802;1.7229 +;- + 46 1 2.157 108522.4 1.0 3207 3450 6654 DOHH2_400M_050219_1,6659 DOHH2_400M_050219_1,6659,TLRERISAF True True TLRERISAF 36.830601 364.877307116985 3736829.75 6654.0 ENSG00000184661|ENST00000330560|CDCA2 3.9353298346201577 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6660 36.833 131.0 516820.0 25 0 73727.0 22875 LSARTHKG 8 95 435.2515280440389 868.4885031548779 2 435.2511169314384 MULTI CID FTMS 0 0 0 6654 351709.3125 0.2469450833812536 -19 2.168537139892578 6 Unmodified _LSARTHKG_ ENST00000539605.5_1_12:133331485-133331596:-|nuORF 2.577480529830294 0.808687252328423 1 M 1 8 3.4949 0.0 0.0 0.40241 0.0 0.0 346.2988802074154 388.1169222467407 734.415802454156 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.40241 - 5 + 1 2.157 58621.3 1.0 3208 3450 6654 DOHH2_400M_050219_1,6660 DOHH2_400M_050219_1,6660,LSARTHKG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6661 36.838 246.0 370050.0 25 0 57168.0 + 15973 ITDHGSLIY 9 95 509.7641699163187 1017.5137868994374 2 509.7636901736259 MULTI CID FTMS 0 0 0 6654 196087.3125 0.2705175897820233 -1 0.1254501342773437 7 Unmodified _ITDHGSLIY_ ENSG00000132109|ENST00000254436|TRIM21;nc|ENSG00000132109|P19474-2|TRIM21 50.855029805455786 0.0384952370514206 1 ES{I|L}{I|L}Y 5 5 57.875 0.0 0.0 5.6879 0.0 0.0 394.19627577949376 0.0 394.19627577949376 0.0 44.68765315847925 0.0 0.0 0 1.0 0.0 1.2302046884880935 0.0 ES{I|L}{I|L}Y 5.6879 - 245 1 2.157 70651.3 1.0 3209 3450 6654 DOHH2_400M_050219_1,6661 DOHH2_400M_050219_1,6661,ITDHGSLIY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6662 36.842 244.0 149710.0 25 0 10694.0 + 2687 ATEDPWKTNY 10 70 612.7803233429337 1223.5460937526673 2 612.7811157107353 MULTI CID FTMS 0 0 0 6654 176816.640625 0.0065571444982613 7 -0.7595634460449219 8 Unmodified _ATEDPWKTNY_ ENSG00000139684|ENST00000378720|ESD 31.26834338654808 0.266153677697784 1 YDTK[HQ] 6 8 17.88 0.0 0.0 1.4614 0.0 0.0 433.1806285200485 0.0 433.1806285200485 0.0 0.2030375612038462 0.0 0.0 0 0.0 0.0 0.0 0.0 YDTK[HQ] 1.4614 - 144 + 1 2.157 35581.2 1.0 3210 3450 6654 DOHH2_400M_050219_1,6662 DOHH2_400M_050219_1,6662,ATEDPWKTNY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6663 36.85 407.0 316570.0 25 0 18032.0 + 29104 QEQDSRLW 8 154 531.2541992497808 1060.4938455663614 2 531.2546874880791 MULTI CID FTMS 0 0 0 6654 173457.921875 1.0 0 0.0 9 Unmodified _QEQDSRLW_ ENST00000389912.6_1_14:70809414-70826359:-|nuORF;ENST00000557612.5_1_14:70795945-70826359:-|nuORF 81.89019881105858 0.0835893570953205 1 QEQDSR{I|L}W 8 0 + 84.383 0.0 0.0 7.957 7.957 93.564 0.0 0.0 0.0 63.66495982548642 14.024174299985006 14.024174299985006 9.262137858390815 0 0.9291746928241124 1.0969100130080565 0.7302046884880937 0.4247425010840047 + + QEQDSR{I|L}W;QEQDS[VG]{I|L}W;QE[AG]DSR{I|L}W;QEQDSRW{I|L};QEQDSR[NG]K;QE[AG]DS[VG]{I|L}W;QEQDSM[VP]K;QE[AG]DSRW{I|L};QEQDS[VG]W{I|L};QEQDSMK[VP] 7.957;7.0836;7.0836;6.5276;6.0872;5.8148;5.6856;5.6543;5.6543;5.2638 +;-;-;-;-;-;-;-;-;- + 970 + 1 2.157 103906.3 1.0 3211 3450 6654 DOHH2_400M_050219_1,6663 DOHH2_400M_050219_1,6663,QEQDSRLW True True QEQDSRLW 36.849681 531.254687488079 1127599.125 6654.0 ENST00000557612.5_1_14:70795945-70826359:-|nuORF;;ENST00000389912.6_1_14:70809414-70826359:-|nuORF 7.183049043019612 2.0 True 8.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6664 36.854 243.0 286670.0 25 0 23385.0 15071 IMIMEVIL 8 97 481.2752966917803 960.5360404503606 2 481.2762939333916 MULTI CID FTMS 0 0 0 6654 149051.21875 0.9563773693561318 -1 0.1254501342773437 10 Unmodified _IMIMEVIL_ ENST00000415279.1_1_1:106434930-106435587:+|nuORF 32.116972079565 0.368454113111938 1 {I|L}M{I|L}Q[KT]D{I|L} 8 4 + 59.096 0.0 0.0 6.1524 6.1524 85.744 0.0 0.0 0.0 44.49146580189777 7.508943624335565 7.508943624335565 6.958865705675876 0 0.4247425010840047 2.0 0.5 0.3807196863200844 {I|L}M{I|L}Q[KT]D{I|L};{I|L}P{M(Oxidation (M))|F}Q[KT]D{I|L};{I|L}M{I|L}[AG][KT]D{I|L};{I|L}P{M(Oxidation (M))|F}[AG][KT]D{I|L};{I|L}PA[KA][WY]{I|L};{I|L}P[RN][WY]{I|L} 6.1524;5.4279;5.1881;4.4636;3.6348;3.2808 -;-;-;-;-;- 274 + 1 2.157 57023.6 1.0 3212 3450 6654 DOHH2_400M_050219_1,6664 DOHH2_400M_050219_1,6664,IMIMEVIL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6665 36.86 293.0 519380.0 25 0 31412.0 + 32767 SEDRSVRIW 9 175 383.2002581956108 1146.5789451870323 3 383.1992675662041 MULTI CID FTMS 0 0 0 6654 153761.015625 0.2712379836951344 -1 0.1254501342773437 11 Unmodified _SEDRSVRIW_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 49.55428908609986 0.0413471690215031 1 SEDRSVR{I|L}W 9 0 + 91.804 0.0 0.0 8.0068 8.0068 86.913 0.0 0.0 0.0 33.46787486224656 3.802112417116064 3.802112417116064 3.802112417116064 0 0.7681574092402441 1.6989700043360187 0.4247425010840047 0.7302046884880937 + + SEDRSVR{I|L}W;SEDRSVRW{I|L};SEGA{[ET]|[MV]}VR{I|L}W;SEW[TA]VR{I|L}W;SEGA{[ET]|[MV]}VRW{I|L};SEQ{[ET]|[MV]}VR{I|L}W;SEW[TA]VRW{I|L};SEQ{[ET]|[MV]}VRW{I|L};SEGA{[ET]|[MV]}V[VG]{I|L}W;SEQ{[ET]|[MV]}V[VG]{I|L}W 8.0068;7.6752;6.6786;6.3714;6.347;6.1089;6.0398;5.7773;5.2424;4.9737 +;-;-;-;-;-;-;-;-;- + 496 + 1 2.157 121051.8 1.0 3213 3450 6654 DOHH2_400M_050219_1,6665 DOHH2_400M_050219_1,6665,SEDRSVRIW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6666 36.873 800.0 147150.0 25 0 5202.1 + 29089 QEMQEKLQNF 10 168 647.8082221485737 0 647.8090698122978 PEAK CID FTMS 0 0 0 6654 128310.84375 1.0 0 0.0 12 Unmodified _QEMQEKLQNF_ ENSG00000106144|ENST00000310447|CASP2;ENST00000472067.1_1_7:142991698-142998016:+|nuORF;ENST00000493642.5_1_7:142986735-143000877:+|nuORF;nc|ENSG00000106144|P42575-2|CASP2 114.20165948288296 4.993728357019926e-06 1 MQE[K{I|L}]QN 7 3 23.46 0.0 0.0 1.8136 0.0 0.0 257.1048134231981 162.0563906305297 419.16120405372783 0.0 0.0 0.0 0.0 0 1.274227503252014 0.0 0.2887254899964357 1.3199601741485107 + MQE[K{I|L}]QN 1.8136 + + 1366 + 1 2.157 94435.0 0.6700000166893005 3214 3450 6654 DOHH2_400M_050219_1,6666 DOHH2_400M_050219_1,6666,QEMQEKLQNF True True QEMQEKLQNF 36.873412 647.809069812298 794217.9375 6654.0 ENSG00000106144|ENST00000310447|CASP2;;ENST00000472067.1_1_7:142991698-142998016:+|nuORF;;nc|ENSG00000106144|P42575-2|CASP2;;ENST00000493642.5_1_7:142986735-143000877:+|nuORF 6.037569681803386 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6667 36.886 756.0 545150.0 25 0 92603.0 + 26358 NSRIKLGL 8 158 450.7852922212809 899.5560315093618 2 450.7851440310478 MULTI CID FTMS 0 0 0 6654 117020.6015625 0.1421649847784203 -1 0.1254501342773437 13 Unmodified _NSRIKLGL_ ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2 99.7552728972412 0.0903925448108435 1 [NS]R{I|L}K{I|L}G{I|L} 8 0 + 90.91 0.0 0.0 10.106 10.106 95.734 0.0 0.0 0.0 10.748080251824009 10.748080251824009 10.748080251824009 10.748080251824009 0 2.138210492164445 1.2218487496163564 0.6643943297944485 1.156038390922711 + + [NS]R{I|L}K{I|L}G{I|L};NSR{I|L}K{I|L}G{I|L};[NS]R{I|L}KG{I|L}{I|L};{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}K{I|L}G{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}K{I|L}G{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GG{I|L}K{I|L}G{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}KG{I|L}{I|L};[KA][RD]K{I|L}G{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GG{I|L}KG{I|L}{I|L};{[TV]|[{I|L}S]}[RN]K{I|L}G{I|L} 10.106;8.9113;8.5477;7.7658;7.2496;6.22;5.6912;4.8094;4.6616;4.325 +;+;-;-;-;-;-;-;-;- + 570 1 2.157 314969.3 1.0 3215 3450 6654 DOHH2_400M_050219_1,6667 DOHH2_400M_050219_1,6667,NSRIKLGL True True NSRIKLGL 36.886487 450.785144031048 4148050.25 6654.0 ENSG00000184357|ENST00000331442|H1-5;;ENSG00000168298|ENST00000304218|H1-4;;ENSG00000187837|ENST00000343677|H1-2;;ENSG00000124575|ENST00000244534|H1-3 4.496472676595052 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6668 36.902 800.0 103420.0 25 0 5867.3 -1 0 112 881.912115665572 1761.8096783979438 2 882.4118530154228 MULTI CID FTMS 0 0 0 6654 96036.0 0.505285795849479 -3 0.2900619506835937 14 1 [NP]{I|L}[WH]SQAEN{NN|[MP]|[D{I|L}]|[EV]}P{[QN]|[E{I|L}]|[KN]} 15 -1 + 36.908 0.0 0.0 2.0949 2.0949 73.126 0.0 0.0 0.0 2.6760624017703094 17.201681228899588 2.6760624017703094 6.283889300503116 0 0.3807196863200844 0.0 0.3807196863200844 0.3252574989159953 [NP]{I|L}[WH]SQAEN{NN|[MP]|[D{I|L}]|[EV]}P{[QN]|[E{I|L}]|[KN]};[{I|L}P]N[WH]SQAEN{NN|[MP]|[D{I|L}]|[EV]}P{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[WH]SQAEN{NN|[MP]|[D{I|L}]|[EV]}V[HC];[NP]{I|L}[WH]SQAE[RH]Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]N[WH]SQAEN{NN|[MP]|[D{I|L}]|[EV]}V[HC];[NP]{I|L}[WH]SQAE[RH]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[NP]{I|L}[WH]SQAE[WR]V[HC];[{I|L}P]N[WH]SQAE[RH]Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]N[WH]SQAE[RH]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{I|L}P]N[WH]SQAE[WR]V[HC] 2.0949;1.7382;1.3524;0.9984;0.99577;0.87248;0.75662;0.64173;0.51581;0.39995 -;-;-;-;-;-;-;-;-;- 574 1 2.157 60666.6 0.5600000023841858 3216 3450 6654 DOHH2_400M_050219_1,6668 DOHH2_400M_050219_1,6668, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6669 36.909 435.0 154830.0 25 0 14134.0 + 45682 YVYPPYVL 8 117 507.2693660604836 1012.5241791877672 2 507.2690002322197 MULTI CID FTMS 0 0 0 6654 95255.125 1.0 0 0.0 15 Unmodified _YVYPPYVL_ REV__ENSG00000110422|ENST00000303296|HIPK3;REV__nc|ENSG00000110422|Q9H422-2|HIPK3 24.20995872069341 0.5349487244130675 1 [YV]Y[RH]Y{I|L} 7 -1 + 41.999 0.0 0.0 4.148 4.148 75.284 0.0 0.0 0.0 10.34395415117551 3.521825181113627 3.521825181113627 3.521825181113627 0 0.4247425010840047 2.0 0.0 0.3807196863200844 [YV]Y[RH]Y{I|L};[YV]Y[RH]{I|L}Y;[YV]YV{[HG]|PP}Y{I|L};[YV]{[QD]|[EN]|[WG]|[KD]|[RS]}NVY{I|L};[YV]YV{[HG]|PP}{I|L}Y;[YV]{[QD]|[EN]|[WG]|[KD]|[RS]}NV{I|L}Y;[YV]YV{[QS]|[NT]}AA{I|L};[YV]YD[KA]AA{I|L};[{I|L}V][{M(Oxidation (M))|F}E]VYM{I|L};[YV]{[QD]|[EN]|[WG]|[KD]|[RS]}[RV]AY 4.148;3.8002;3.7147;3.3751;3.3669;3.0273;2.5308;2.1926;2.0523;2.044 -;-;-;-;-;-;-;-;-;- 350 + 1 2.157 54427.2 1.0 3217 3450 6654 DOHH2_400M_050219_1,6669 DOHH2_400M_050219_1,6669,YVYPPYVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6670 36.911 84.0 924090.0 25 0 63579.0 + 818 AETARLTSF 9 83 498.2620673997962 994.5095818663924 2 498.2616454958916 MULTI CID FTMS 0 0 0 6654 206299.234375 1.0 0 0.0 16 Unmodified _AETARLTSF_ ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000549933.5_1_12:69979244-69980637:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF 17.11289562659939 0.3734572693229295 1 A{I|L} 2 7 16.198 0.0 0.0 1.6287 0.0 0.0 792.3776676591643 0.0 792.3776676591643 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L} 1.6287 - 69 + 1 2.157 65105.5 1.0 3218 3450 6654 DOHH2_400M_050219_1,6670 DOHH2_400M_050219_1,6670,AETARLTSF False True AETARLTSF 36.91112 498.261645495892 1097461.625 6654.0 ENST00000549933.5_1_12:69979244-69980637:+|nuORF;;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;;ENSG00000166226|ENST00000299300|CCT2 2.223182201385498 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6671 36.915 187.0 367890.0 25 0 58163.0 6720 EDILPLTL 8 101 457.264750285986 0 457.2649108767509 PEAK CID FTMS 0 0 0 6654 186945.59375 1.0 0 0.0 17 Unmodified _EDILPLTL_ ENSG00000137492|ENST00000260045|THAP12;ENST00000520248.1_1_8:79672597-79674655:-|nuORF;nc|ENSG00000137492|O43422-2|THAP12 9.347437153973935 0.5488964601725408 1 N 1 8 4.9164 0.0 0.0 0.53878 0.0 0.0 667.3766247401377 128.07196985416252 795.4485945943002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 N 0.53878 - 23 + 1 2.157 57492.2 1.0 3219 3450 6654 DOHH2_400M_050219_1,6671 DOHH2_400M_050219_1,6671,EDILPLTL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6673 36.923 227.0 213380.0 25 0 27573.0 -1 0 74 909.0605637624144 2724.1598618874427 3 909.395068347454 MULTI CID FTMS 0 0 0 6672 304170.0625 0.3274520021840356 2 -0.2597465515136719 1 1 [YG]Q[TA]SQ[TP]Y 10 -1 33.694 0.0 0.0 1.2369 0.0 0.0 0.0 1624.6537333076178 1624.6537333076178 14.84738997089424 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.579689690656103 0.3494850021680094 [YG]Q[TA]SQ[TP]Y 1.2369 - 970 1 2.163 41888.0 1.0 3220 3451 6672 DOHH2_400M_050219_1,6673 DOHH2_400M_050219_1,6673, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6674 36.926 187.0 352490.0 25 0 30847.0 + 8135 EPLAKKIF 8 98 473.2919545509585 944.5693561687168 2 473.2922546267509 MULTI CID FTMS 0 0 0 6672 150290.125 0.1705675225560365 2 -0.2597465515136719 2 Unmodified _EPLAKKIF_ ENSG00000218739|ENST00000402297|CEBPZOS;ENST00000470216.1_1_2:37426847-37428252:+|nuORF 19.438996006549623 0.6237395211498085 1 [NP]KAK{I|L}K 7 4 19.685 0.0 0.0 2.084 0.0 0.0 0.0 162.05645166568596 162.05645166568596 5.705707356182117 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]KAK{I|L}K 2.084 - 196 + 1 2.163 58803.2 1.0 3221 3451 6672 DOHH2_400M_050219_1,6674 DOHH2_400M_050219_1,6674,EPLAKKIF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6675 36.928 29.0 2191700.0 25 0 169940.0 + 4751 DEIERKFDKW 10 79 455.8983661249024 1364.6732689749072 3 455.8983032107353 MULTI CID FTMS 0 0 0 6672 1655138.5 0.6695160855476922 -1 0.1025238037109375 3 Unmodified _DEIERKFDKW_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 35.079672537005266 0.2095246155385646 1 W{[{M(Oxidation (M))|F}D]|MM}K{I|L}E[DV]KW 10 6 + 42.202 0.0 0.0 3.0924 3.0924 73.489 0.0 0.0 0.0 25.20689673945462 2.3316559547312465 2.3316559547312465 4.771212547196619 0 0.3807196863200844 0.0 0.7302046884880937 0.0 W{[{M(Oxidation (M))|F}D]|MM}K{I|L}E[DV]KW;W{[{M(Oxidation (M))|F}D]|MM}KNK[DV]KW;{[CT]|[{M(Oxidation (M))|F}G]}K[DV]KNKWED;[R{M(Oxidation (M))|F}]WW{I|L}KWED;W{[{M(Oxidation (M))|F}D]|MM}{I|L}KE[DV]KW;{[CT]|[{M(Oxidation (M))|F}G]}K[DV]E{I|L}K[VS]ED;W{[{M(Oxidation (M))|F}D]|MM}K{I|L}E[DV]WK;[R{M(Oxidation (M))|F}]WWK{I|L}WED;W{[{M(Oxidation (M))|F}D]|MM}{I|L}EK[DV]KW;{[CT]|[{M(Oxidation (M))|F}G]}K[DV]KGGKWED 3.0924;2.7428;2.7251;2.499;2.4867;2.4058;2.3858;2.1493;2.1371;2.0562 -;-;-;-;-;-;-;-;-;- 565 + 1 2.163 58701.8 1.0 3222 3451 6672 DOHH2_400M_050219_1,6675 DOHH2_400M_050219_1,6675,DEIERKFDKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6676 36.929 72.0 1223000.0 25 0 92698.0 21666 LPLLLMALL 9 83 498.8318221295343 995.6490913258688 2 498.8320800662041 MULTI CID FTMS 0 0 0 6672 907279.8125 1.0 0 0.0 4 Unmodified _LPLLLMALL_ ENSG00000130768|ENST00000373894|SMPDL3B;ENST00000548116.5_1_1:28271947-28285346:+|nuORF 36.46614268402704 0.0948557732959553 1 {I|L}P 2 7 38.443 0.0 0.0 3.8611 0.0 0.0 0.0 782.4886711319103 782.4886711319103 11.237125054200234 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + {I|L}P 3.8611 + + 57 + 1 2.163 69633.0 1.0 3223 3451 6672 DOHH2_400M_050219_1,6676 DOHH2_400M_050219_1,6676,LPLLLMALL True False LPSRKLVAL 36.929322 498.832080066204 5805748.5 6672.0 PSMG2|p.M147Cfs*9|1|0.11|ENSG00000128789|chr18:12720539-12720539|C/-|frameshift_variant;;ENSG00000128789|ENST00000317615|PSMG2;;nc|ENSG00000128789|Q969U7-2|PSMG2 2.0717916091283164 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6677 36.931 77.0 881520.0 25 0 128120.0 + 35233 SSDSVGGFRY 10 93 537.7462388270689 1073.4779247209376 2 537.7466918826103 MULTI CID FTMS 0 0 0 6672 597436.5625 0.8071647531481291 -1 0.1025238037109375 5 Unmodified _SSDSVGGFRY_ ENSG00000113282|ENST00000411809|CLINT1;nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1 75.76082778847304 0.0187510588500744 1 {[CA]|SS}DSVY 6 4 41.911 0.0 0.0 3.9042 0.0 0.0 0.0 432.2004357940455 432.2004357940455 19.872118693881543 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.0 {[CA]|SS}DSVY 3.9042 - 158 + 1 2.163 57777.4 1.0 3224 3451 6672 DOHH2_400M_050219_1,6677 DOHH2_400M_050219_1,6677,SSDSVGGFRY True True SSDSVGGFRY 36.931109 537.74669188261 4597255.0 6672.0 ENSG00000113282|ENST00000411809|CLINT1;;nc|ENSG00000113282|Q14677-2|CLINT1;;nc|ENSG00000113282|Q14677-3|CLINT1 7.853669802347819 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6678 36.934 133.0 529220.0 25 0 34386.0 + 33094 SESELGRKW 9 92 567.2828104734657 1132.5510680137313 2 567.2825195193291 MULTI CID FTMS 0 0 0 6672 344801.625 1.0 0 0.0 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SESELGRKW_ ENSG00000173436|ENST00000322753|MICOS10;ENST00000462646.5_1_1:19923518-19941047:+|nuORF;ENST00000467029.5_1_1:19923518-19943759:+|nuORF;ENST00000498067.1_1_1:19923518-19924374:+|nuORF;ENST00000498642.5_1_1:19923539-19952083:+|nuORF;ENST00000602662.1_3_1:19923518-19981524:+|nuORF;nc|ENSG00000173436|Q5TGZ0-2|MICOS10 49.55428908609986 0.0413471690215031 1 EESE{I|L}{[NV]|[RG]}KW 9 1 + 58.734 0.0 0.0 5.186 5.186 89.895 0.0 0.0 0.0 40.23895634497293 9.181212380090216 9.181212380090216 43.62273132779854 0 1.7302046884880935 0.0 0.3807196863200844 0.0 EESE{I|L}{[NV]|[RG]}KW;ER[W{I|L}]{[ES]|[DT]|[{I|L}C]}KW 5.186;1.3343 -;- 125 + 1 2.163 57782.0 1.0 3225 3451 6672 DOHH2_400M_050219_1,6678 DOHH2_400M_050219_1,6678,SESELGRKW True False SESELGRKW 36.933815 567.282519519329 1780556.5 6672.0 ENST00000467029.5_1_1:19923518-19943759:+|nuORF;;ENSG00000173436|ENST00000322753|MICOS10;;ENST00000462646.5_1_1:19923518-19941047:+|nuORF;;ENST00000498642.5_1_1:19923539-19952083:+|nuORF;;ENST00000498067.1_1_1:19923518-19924374:+|nuORF;;ENST00000602662.1_3_1:19923518-19981524:+|nuORF;;nc|ENSG00000173436|Q5TGZ0-2|MICOS10 7.897702217102051 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6679 36.939 288.0 635050.0 25 0 77070.0 + 4752 DEIERKFDKW 10 105 683.3439781375957 1364.6734033419914 2 683.3446533083916 MULTI CID FTMS 0 0 0 6672 324328.84375 0.6425834266904238 -1 0.1025238037109375 7 Unmodified _DEIERKFDKW_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 83.6515911177208 0.014075193558362 1 DE{[CT]|[{M(Oxidation (M))|F}G]}KNKVDKW 11 5 + 93.657 0.0 0.0 6.8629 6.8629 79.946 0.0 0.0 0.0 13.21007384147032 6.962946451439692 6.962946451439692 0.3518325094788395 0 1.924742501084005 1.5228787452803376 1.548455006504028 0.4247425010840047 DE{[CT]|[{M(Oxidation (M))|F}G]}KNKVDKW;DE{[CT]|[{M(Oxidation (M))|F}G]}{I|L}EKVDKW;DE{I|L}{[CT]|[{M(Oxidation (M))|F}G]}EKVDKW;DE{I|L}E{[CT]|[{M(Oxidation (M))|F}G]}KVDKW;DE{[CT]|[{M(Oxidation (M))|F}G]}KNKVDWK;DE{[CT]|[{M(Oxidation (M))|F}G]}{I|L}EKVDWK;DE{I|L}[W{M(Oxidation (M))|F}]KVDKW;DE{I|L}{[CT]|[{M(Oxidation (M))|F}G]}EKVDWK;DE{[CT]|[{M(Oxidation (M))|F}G]}KGGKVDKW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ERK{M(Oxidation (M))|F}DKAD 6.8629;6.8372;6.781;6.4404;6.3527;6.3269;6.3082;6.2708;6.194;6.1562 -;-;-;-;-;-;-;-;-;- 6960 + 1 2.163 134135.0 1.0 3226 3451 6672 DOHH2_400M_050219_1,6679 DOHH2_400M_050219_1,6679,DEIERKFDKW True True DEIERKFDKW 36.939111 683.344653308392 19188811.25 6672.0 ENST00000466404.5_1_19:54621832-54631576:+|nuORF;;nc|ENSG00000105618|Q8WWY3-3|PRPF31;;nc|ENSG00000105618|Q8WWY3-2|PRPF31;;ENSG00000105618|ENST00000321030|PRPF31;;nc|ENSG00000105618|Q8WWY3-4|PRPF31 8.67059326171875 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6680 36.941 112.0 636500.0 25 0 160220.0 -1 0 98 398.23045629931806 794.4463596654361 2 398.2304565310478 MULTI CID FTMS 0 0 0 6672 251787.328125 0.5491208689653537 -2 0.2279739379882812 8 1 P 1 -1 8.5835 0.0 0.0 1.0804 0.0 0.0 679.3825225456104 0.0 679.3825225456104 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.0804 - 14 + 1 2.163 61198.8 1.0 3227 3451 6672 DOHH2_400M_050219_1,6680 DOHH2_400M_050219_1,6680, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6681 36.946 231.0 570440.0 25 0 51666.0 + 44261 YLKVKGNVF 9 117 534.3159900144643 1066.6174270957283 2 534.3160278201103 MULTI CID FTMS 0 0 0 6672 229102.90625 0.1180284609323859 -1 0.1025238037109375 9 Unmodified _YLKVKGNVF_ ENSG00000108298|ENST00000225430|RPL19;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;ENST00000429272.1_1_2:131051524-131051887:+|nuORF;ENST00000472309.1_1_4:179208113-179208287:+|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 71.13359017698441 0.0206607516130725 1 Y{I|L}KV[W{I|L}]V{M(Oxidation (M))|F} 8 3 + 71.397 0.0 0.0 6.6938 6.6938 93.065 0.0 0.0 0.0 25.1893017848453 12.67606240177031 12.67606240177031 16.638319829744916 0 1.8996498648046136 2.0 0.0 0.3807196863200844 Y{I|L}KV[W{I|L}]V{M(Oxidation (M))|F};[Y{I|L}]KV[W{I|L}]V{M(Oxidation (M))|F};[NG]VKVK{I|L}Y{M(Oxidation (M))|F};[NG]VKKV{I|L}Y{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[NG]VK{I|L}Y{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[NG]KV{I|L}Y{M(Oxidation (M))|F};[KG]{[NV]|[RG]}VK{I|L}Y{M(Oxidation (M))|F};[KG]{[NV]|[RG]}KV{I|L}Y{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[W{I|L}]V{I|L}Y{M(Oxidation (M))|F};[K{I|L}]QQK{I|L}Y{M(Oxidation (M))|F} 6.6938;5.1339;4.0223;3.8435;3.5971;3.4184;3.3578;3.1791;2.9307;2.8701 -;-;-;-;-;-;-;-;-;- 440 + 1 2.163 105165.4 1.0 3228 3451 6672 DOHH2_400M_050219_1,6681 DOHH2_400M_050219_1,6681,YLKVKGNVF True True YLKVKGNVF 36.945803 534.31602782011 22021330.0 6672.0 ENST00000472309.1_1_4:179208113-179208287:+|nuORF;;ENST00000429272.1_1_2:131051524-131051887:+|nuORF;;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;;ENSG00000108298|ENST00000225430|RPL19 5.668590863545735 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6682 36.96 800.0 272930.0 25 0 26699.0 + 25982 NLQIKENAL 9 221 521.7982659862947 1041.5819790393894 2 521.7986328005791 MULTI CID FTMS 0 0 0 6672 210981.59375 1.0 0 0.0 10 Unmodified _NLQIKENAL_ ENSG00000129003|ENST00000644861|VPS13C;ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 118.89474601620944 0.0019711750475752 1 {[QV]|[N{I|L}]|[RA]|[KV]}QS{I|L}GA{I|L}N{I|L} 10 5 + 79.764 0.0 0.0 7.6579 7.6579 81.972 0.0 0.0 0.0 16.73249278415991 0.6112061033247329 0.6112061033247329 0.6112061033247329 0 1.1989700043360187 2.0 1.079689690656103 2.139372218766304 {[QV]|[N{I|L}]|[RA]|[KV]}QS{I|L}GA{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QS{I|L}GARA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QS{I|L}Q{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QS{I|L}G{I|L}AN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QS{I|L}QRA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}SGA{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QS{I|L}G{I|L}NA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}SGARA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}SQ{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}SG{I|L}AN{I|L} 7.6579;7.5993;7.3223;7.2709;7.2636;7.2434;7.2123;7.1847;6.9078;6.8564 -;-;-;-;-;-;-;-;-;- 7715 1 2.163 163623.9 0.7900000214576721 3229 3451 6672 DOHH2_400M_050219_1,6682 DOHH2_400M_050219_1,6682,NLQIKENAL True True NLQIKENAL 36.959632 521.798632800579 962500.375 6672.0 ENSG00000197969|ENST00000360280|VPS13A;;nc|ENSG00000197969|Q96RL7-2|VPS13A;;nc|ENSG00000129003|Q709C8-4|VPS13C;;ENSG00000129003|ENST00000644861|VPS13C;;nc|ENSG00000197969|Q96RL7-4|VPS13A;;nc|ENSG00000129003|Q709C8-2|VPS13C;;nc|ENSG00000129003|Q709C8-3|VPS13C;;nc|ENSG00000197969|Q96RL7-3|VPS13A 5.224219799041748 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6683 36.967 397.0 283700.0 25 0 20376.0 + 1441 ALEEQLQQIR 10 94 614.3376597217762 0 614.3383056521416 PEAK CID FTMS 0 0 0 6672 160843.15625 1.0 0 0.0 11 Unmodified _ALEEQLQQIR_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 86.33184430468982 4.8045625344053936e-05 1 EEQ{I|L}QQ{I|L} 7 3 74.245 0.0 0.0 6.0526 0.0 0.0 184.1221735223956 171.08909021549064 355.21126373788627 0.0 0.0 0.0 0.0 0 1.579689690656103 0.0 0.805462187404089 1.2302046884880935 + EEQ{I|L}QQ{I|L} 6.0526 + + 388 + 1 2.163 86672.2 1.0 3230 3451 6672 DOHH2_400M_050219_1,6683 DOHH2_400M_050219_1,6683,ALEEQLQQIR True True ALEEQLQQIR 36.966749 614.338305652142 953583.25 6672.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 8.319693724314371 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 6684 36.973 329.0 203980.0 25 0 13499.0 + 30459 READLDFARQY 11 88 461.89435033500814 0 461.8947326540947 PEAK CID FTMS 0 0 0 6672 124976.296875 1.0 0 0.0 12 Unmodified _READLDFARQY_ ENSG00000131558|ENST00000253861|EXOC4 27.289341220302404 0.2615134599944002 1 D{I|L}DA 4 7 11.771 0.0 0.0 1.277 0.0 0.0 222.4544076574645 282.1205233209594 504.574930978424 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L}DA 1.277 - 48 + 1 2.163 57057.0 1.0 3231 3451 6672 DOHH2_400M_050219_1,6684 DOHH2_400M_050219_1,6684,READLDFARQY False True READLDFARQY 36.972715 461.894732654095 515735.0 6672.0 ENSG00000131558|ENST00000253861|EXOC4 4.012223323186238 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6685 36.987 800.0 210750.0 25 0 15651.0 + 2110 APTGGGGGWG 10 186 408.6847421240797 0 408.6848937869072 PEAK CID FTMS 0 0 0 6672 97525.625 1.0 0 0.0 13 Unmodified _APTGGGGGWG_ REV__ENST00000524877.5_1_11:61717864-61722837:+|nuORF;REV__ENST00000533521.5_1_11:61719272-61722837:+|nuORF 1.6526216038709556 0.3961065659209837 1 {I|L} 1 -1 6.9897 0.0 0.0 0.85726 0.0 0.0 209.0669718215069 490.1809481256469 699.2479199471538 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.85726 - 39 + 1 2.163 130113.5 0.4199999868869781 3232 3451 6672 DOHH2_400M_050219_1,6685 DOHH2_400M_050219_1,6685,APTGGGGGWG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6686 36.993 311.0 180900.0 25 0 16170.0 1535 ALKNSHKAL 9 87 491.29600265389314 0 491.2962219119072 PEAK CID FTMS 0 0 0 6672 93254.3125 1.0 0 0.0 14 Unmodified _ALKNSHKAL_ ENSG00000275700|ENST00000619387|AATF 21.74664581756881 0.185237546287679 1 AV 2 8 17.959 0.0 0.0 1.8315 0.0 0.0 131.09547103783456 676.3527565611683 807.4482275990028 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 AV 1.8315 - 33 + 1 2.163 48571.2 1.0 3233 3451 6672 DOHH2_400M_050219_1,6686 DOHH2_400M_050219_1,6686,ALKNSHKAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6687 37.007 800.0 68886.0 25 0 4440.7 14218 IDNDTEEEFY 10 91 637.754880888437 1273.495208843674 2 637.7551147341728 MULTI CID FTMS 0 0 0 6672 84627.078125 1.0 0 0.0 15 Unmodified _IDNDTEEEFY_ ENSG00000132792|ENST00000361383|CTNNBL1;nc|ENSG00000132792|Q8WYA6-2|CTNNBL1;nc|ENSG00000132792|Q8WYA6-3|CTNNBL1;nc|ENSG00000132792|Q8WYA6-4|CTNNBL1 4.3292370932331545 0.7066112369704343 1 AY 2 9 20.969 0.0 0.0 1.6466 0.0 0.0 1021.384092365938 0.0 1021.384092365938 0.0 9.30684181573442 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 1.6466 - 19 + 1 2.163 51791.5 0.5 3234 3451 6672 DOHH2_400M_050219_1,6687 DOHH2_400M_050219_1,6687,IDNDTEEEFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6688 37.012 277.0 263800.0 25 0 11925.0 + + 8417 SEEEIREAF 9 99 555.7639478427533 1109.5133427523065 2 555.2588989138603 MULTI CID FTMS 0 0 0 6672 86167.7734375 0.9236949758734964 -1 0.1025238037109375 16 Unmodified _ESFVRFYY_ ENSG00000160014|ENST00000291295|CALM3;ENST00000482532.5_1_2:47387917-47389823:-|nuORF;ENST00000585658.1_1_17:68237680-68237866:+|nuORF;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;ENST00000597868.5_1_19:47104691-47111872:+|nuORF;ENSG00000198668|ENST00000356978|CALM1;ENSG00000143933|ENST00000272298|CALM2 18.13498045792455 0.6430038125133779 1 {[CP]|[EA]}YVS 5 -1 23.015 0.0 0.0 2.0744 0.0 0.0 0.0 557.2493380182249 557.2493380182249 3.807196863200844 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {[CP]|[EA]}YVS 2.0744 - 192 + 1 2.163 57448.9 1.0 3235 3451 6672 DOHH2_400M_050219_1,6688 DOHH2_400M_050219_1,6688,ESFVRFYY False False SEEEIREAF 37.012313 555.25889891386 1089526.125 6672.0 ENSG00000160014|ENST00000291295|CALM3;;ENST00000482532.5_1_2:47387917-47389823:-|nuORF;;ENST00000585658.1_1_17:68237680-68237866:+|nuORF;;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;;ENST00000597868.5_1_19:47104691-47111872:+|nuORF;;ENSG00000198668|ENST00000356978|CALM1;;ENSG00000143933|ENST00000272298|CALM2 5.15026346842448 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6689 37.016 183.0 593900.0 25 0 95529.0 -1 FMMPTMAL 8 105 479.2158945601389 956.4172361870778 2 479.2157165408134 MULTI CID FTMS 0 0 0 6672 283007.4375 1.0 0 0.0 17 Oxidation (M) _FM(Oxidation (M))MPTMAL_ nc|ENSG00000197558|A2VEC9|SSPOP 6.354104778181461 0.7857632046190106 1 G{I|L} 2 -1 14.949 0.0 0.0 1.563 0.0 0.0 768.3007791331701 0.0 768.3007791331701 0.0 4.352568178204894 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L} 1.563 - 73 + 1 2.163 87972.3 1.0 3236 3451 6672 DOHH2_400M_050219_1,6689 DOHH2_400M_050219_1,6689,FMMPTMAL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6690 37.021 236.0 353780.0 25 0 27465.0 + 26101 NPKIKDIL 8 108 470.7950271653598 939.5755013975196 2 470.7948791384697 MULTI CID FTMS 0 0 0 6672 236460.3125 1.0 0 0.0 18 Unmodified _NPKIKDIL_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928-2|POLR2A;nc|ENSG00000181222|P24928|POLR2A 56.17704186161178 0.1143274477948619 1 NPK{I|L} 4 4 42.165 0.0 0.0 4.4877 0.0 0.0 0.0 484.2790621393188 484.2790621393188 26.732134836883084 0.0 0.0 0.0 0 0.6203715150305281 1.154901959985743 0.0 0.0 + NPK{I|L} 4.4877 + + 132 + 1 2.163 65742.3 1.0 3237 3451 6672 DOHH2_400M_050219_1,6690 DOHH2_400M_050219_1,6690,NPKIKDIL True True NPKIKDIL 37.021434 470.79487913847 1356241.75 6672.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A;;nc|ENSG00000181222|P24928-2|POLR2A 2.471806287765503 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6691 37.035 800.0 57235.0 25 0 2939.2 + 31477 RPWYWEWCTWQ 11 68 820.8591796755791 0 820.8591796755791 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _RPWYWEWCTWQ_ REV__ENST00000409198.5_2_2:152506865-152507290:-|nuORF 1.3295316138638542 0.4761840153648598 1 {M(Oxidation (M))|F}A 2 -1 10.969 0.0 0.0 0.66897 0.0 0.0 336.14830671614783 1082.4292449665732 1418.577551682721 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}A 0.66897 - 27 + 1 2.163 35191.2 0.5 3238 3451 6672 DOHH2_400M_050219_1,6691 DOHH2_400M_050219_1,6691,RPWYWEWCTWQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6692 37.042 360.0 106670.0 25 0 6837.7 + 33066 SEQQIVSNTL 10 88 559.7871871796715 0 559.7865478396416 PEAK CID FTMS 0 0 0 6672 87444.0078125 1.0 0 0.0 20 Unmodified _SEQQIVSNTL_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;ENST00000478291.1_1_3:184049262-184049734:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 15.248480904072842 0.3349989633518451 1 SQY 3 8 13.94 0.0 0.0 1.2474 0.0 0.0 558.3300373458679 178.05124841861564 736.3812857644836 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 SQY 1.2474 - 31 + 1 2.163 37013.0 1.0 3239 3451 6672 DOHH2_400M_050219_1,6692 DOHH2_400M_050219_1,6692,SEQQIVSNTL False True SEQQIVSNTL 37.041792 559.786547839642 463789.75 6672.0 ENSG00000114867|ENST00000346169|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-5|EIF4G1;;ENST00000460829.5_1_3:184046782-184052693:+|nuORF;;ENST00000478291.1_1_3:184049262-184049734:+|nuORF;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-6|EIF4G1 4.459479173024495 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6694 37.047 15.0 2963200.0 25 0 388550.0 + 1011 AGADHIITM 9 73 464.7316379614084 927.4487229896168 2 464.7317993044853 MULTI CID FTMS 0 0 0 6693 3225781.5 0.4048921336844561 1 -0.132659912109375 1 Unmodified _AGADHIITM_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 36.04419817259434 0.0971720506436186 1 [HD]AGA{I|L}{I|L}TM 9 4 + 42.074 0.0 0.0 4.5365 4.5365 73.946 0.0 0.0 0.0 5.44068044350275 6.383053610791563 5.44068044350275 1.706962271689747 0 0.8935078169319297 0.0 0.3807196863200844 0.0 [HD]AGA{I|L}{I|L}TM;[HD]AQ{I|L}{I|L}TM;[HD]{I|L}AGA{I|L}TM;[HD]{I|L}QA{I|L}TM;[HD]{I|L}AQ{I|L}TM;[HD]QA{I|L}{I|L}TM;[HD]AG{I|L}A{I|L}TM;[HD]A{I|L}GA{I|L}TM;[H{I|L}]DAGA{I|L}TM;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[WK]TM 4.5365;4.3525;4.3466;4.1626;4.1626;4.1626;4.0221;4.0221;3.9499;3.8483 -;-;-;-;-;-;-;-;-;- 446 1 2.163 39589.8 1.0 3240 3452 6693 DOHH2_400M_050219_1,6694 DOHH2_400M_050219_1,6694,AGADHIITM True True AGADHIITM 37.046586 464.731799304485 79220848.0 6693.0 ENSG00000147224|ENST00000372435|PRPS1;;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;;ENSG00000229937|ENST00000506618|PRPS1L1;;ENSG00000101911|ENST00000380668|PRPS2;;nc|ENSG00000147224|P60891-2|PRPS1;;nc|ENSG00000101911|P11908-2|PRPS2 5.032519817352295 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6695 37.049 116.0 377590.0 25 0 55329.0 + 15998 ITDSAGHILY 10 78 545.2826894321944 1088.550825931189 2 545.2828857302666 MULTI CID FTMS 0 0 0 6693 307913.6875 0.1463884510398989 2 -0.2494049072265625 2 Unmodified _ITDSAGHILY_ ENSG00000170348|ENST00000303575|TMED10 26.020703789607367 0.3840598856887971 1 [{I|L}T][HN]DT{I|L} 7 7 46.03 0.0 0.0 4.2286 0.0 0.0 0.0 291.13718863331763 291.13718863331763 29.576666314464788 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 [{I|L}T][HN]DT{I|L} 4.2286 - 282 1 2.163 36972.5 1.0 3241 3452 6693 DOHH2_400M_050219_1,6695 DOHH2_400M_050219_1,6695,ITDSAGHILY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6696 37.05 44.0 1843200.0 25 0 302210.0 + 8323 ERLKVLYF 8 93 356.54665377373595 1066.618131921408 3 356.5463134646416 MULTI CID FTMS 0 0 0 6693 1144885.75 1.0 0 0.0 3 Unmodified _ERLKVLYF_ nc|ENSG00000122008|Q9UBT6-2|POLK 25.399314129420983 0.5099049743284904 1 Y{I|L}KV 4 5 25.477 0.0 0.0 2.3886 0.0 0.0 193.0733436508468 367.2109774225219 560.2843210733687 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.7302046884880937 Y{I|L}KV 2.3886 - 52 + 1 2.163 72645.1 1.0 3242 3452 6693 DOHH2_400M_050219_1,6696 DOHH2_400M_050219_1,6696,ERLKVLYF False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6697 37.052 76.0 878540.0 25 0 77796.0 + 22608 LPYIKQEV 8 88 495.2872326325492 988.5599123318984 2 495.2871276736259 MULTI CID FTMS 0 0 0 6693 755785.5 0.6016853164431499 -2 0.2296104431152343 4 Unmodified _LPYIKQEV_ ENSG00000047315|ENST00000314595|POLR2B 41.8396318013385 0.2035142800366642 1 {I|L}PY{I|L}KQEV 8 0 + 76.152 0.0 0.0 7.7033 7.7033 87.63 0.0 0.0 0.0 21.42381955775751 5.006023505691857 5.006023505691857 5.006023505691857 0 0.8494850021680094 1.6989700043360187 0.6747425010840047 0.0 + + {I|L}PY{I|L}KQEV;{I|L}PY{I|L}KQD{I|L};{I|L}PY{I|L}K[AG]EV;{I|L}PY{I|L}K[AG]D{I|L};{I|L}PY{I|L}K[DG]A{I|L} 7.7033;7.1969;6.7664;6.26;6.0191 +;-;-;-;- + 675 + 1 2.163 57789.9 1.0 3243 3452 6693 DOHH2_400M_050219_1,6697 DOHH2_400M_050219_1,6697,LPYIKQEV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6698 37.054 105.0 694440.0 25 0 49556.0 + 11291 GEVEGHPVW 9 106 505.24064588176674 1008.4667388303336 2 505.2406188845634 MULTI CID FTMS 0 0 0 6693 566758.4375 0.3298657326769777 -1 0.1270866394042968 5 Unmodified _GEVEGHPVW_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 48.345845343767074 0.0439967357579942 1 {[DA]|[EG]}VEGHPVW 9 0 + 64.887 0.0 0.0 6.4342 6.4342 94.07 0.0 0.0 0.0 34.41077280486404 10.62977812912628 10.62977812912628 35.7767182247898 0 1.6237125054200234 1.6989700043360187 0.4247425010840047 0.0 + + {[DA]|[EG]}VEGHPVW;{[DA]|[EG]}[R{M(Oxidation (M))|F}]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};{[DA]|[EG]}[{I|L}T]W{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]WP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]PW{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]{[DA]|[EG]}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]P{[DA]|[EG]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F} 6.4342;2.8866;2.5867;1.3328;1.0329;0.40757;0.10773 +;-;-;-;-;-;- + 438 + 1 2.163 59293.3 1.0 3244 3452 6693 DOHH2_400M_050219_1,6698 DOHH2_400M_050219_1,6698,GEVEGHPVW True True GEVEGHPVW 37.054217 505.240618884563 20448704.0 6693.0 nc|ENSG00000102900|Q8N1F7-2|NUP93;;ENSG00000102900|ENST00000308159|NUP93 7.454750696818034 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6699 37.056 99.0 522060.0 25 0 38114.0 + 34638 SPNQKLLAV 9 97 485.2911463165341 968.5677396998684 2 485.2909118533134 MULTI CID FTMS 0 0 0 6693 467133.15625 1.0 0 0.0 6 Unmodified _SPNQKLLAV_ ENSG00000065183|ENST00000349139|WDR3 31.26834338654808 0.1333407332142048 1 {[QN]|[E{I|L}]|[KN]}PSK{I|L}{I|L}AV 9 4 + 32.553 0.0 0.0 3.361 3.361 70.021 0.0 0.0 0.0 1.461280356782385 5.000000000000004 1.461280356782385 1.461280356782385 0 1.242992819099939 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}PSK{I|L}{I|L}AV;[NP]QSK{I|L}{I|L}AV;[PA][NG]SK{I|L}{I|L}AV;{[QN]|[E{I|L}]|[KN]}PSK{I|L}A{I|L}V;[NP]QSK{I|L}A{I|L}V;{[QN]|[E{I|L}]|[KN]}PSKA{I|L}{I|L}V;[PA][NG]SK{I|L}A{I|L}V;[PS]VVT{I|L}R[TP];[NP]QSKA{I|L}{I|L}V;[PA][NG]SKA{I|L}{I|L}V 3.361;3.2101;3.1792;2.8447;2.6939;2.6629;2.6629;2.5594;2.5121;2.4811 -;-;-;-;-;-;-;-;-;- 357 1 2.163 43657.9 1.0 3245 3452 6693 DOHH2_400M_050219_1,6699 DOHH2_400M_050219_1,6699,SPNQKLLAV False True SPNQKLLAV 37.056348 485.290911853313 2495743.75 6693.0 ENSG00000065183|ENST00000349139|WDR3 2.316376725832621 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6700 37.061 278.0 303160.0 25 0 51754.0 + 40453 VILLQDAA 8 111 421.7516385099368 841.4887240866735 2 421.7513305544853 MULTI CID FTMS 0 0 0 6693 370360.8125 0.7211321161359249 -5 0.5196723937988281 7 Unmodified _VILLQDAA_ REV__ENSG00000128656|ENST00000409900|CHN1;REV__ENST00000425395.5_1_2:175711684-175816905:-|nuORF;REV__ENST00000488080.5_1_2:175711684-175870060:-|nuORF;REV__nc|ENSG00000128656|P15882-3|CHN1 2.302733041254933 0.8103549651115762 1 Y 1 -1 10.837 0.0 0.0 1.2879 0.0 0.0 660.4144881021017 0.0 660.4144881021017 0.0 1.74667337619268 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2879 - 17 + 1 2.163 68726.6 1.0 3246 3452 6693 DOHH2_400M_050219_1,6700 DOHH2_400M_050219_1,6700,VILLQDAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6701 37.064 126.0 825060.0 25 0 122610.0 + 11266 GETPQTDVRW 10 87 594.7860347555895 0 594.7859374880791 PEAK CID FTMS 0 0 0 6693 355905.28125 0.8087590354515649 -1 0.1270866394042968 8 Unmodified _GETPQTDVRW_ ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB 63.22749603027936 0.019413098782066 1 TPQTDVR 7 3 62.511 0.0 0.0 5.2638 0.0 0.0 186.06256867128252 201.0675753229125 387.1301439941951 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.9247425010840048 0.805462187404089 + TPQTDVR 5.2638 + + 104 + 1 2.163 80900.4 1.0 3247 3452 6693 DOHH2_400M_050219_1,6701 DOHH2_400M_050219_1,6701,GETPQTDVRW True True GETPQTDVRW 37.064062 594.785937488079 3014735.75 6693.0 nc|ENSG00000089597|Q14697-2|GANAB;;ENSG00000089597|ENST00000356638|GANAB 8.981232007344564 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6702 37.067 123.0 481420.0 25 0 22488.0 + 2661 ATDLAQHLY 9 101 516.261554842568 1030.508556751936 2 516.2618286013603 MULTI CID FTMS 0 0 0 6693 346090.125 1.0 0 0.0 9 Unmodified _ATDLAQHLY_ ENSG00000163492|ENST00000443758|CCDC141;nc|ENSG00000163492|Q6ZP82-1|CCDC141 64.23631603340823 0.0237365939569086 1 [TA]D{I|L}AQH{I|L}Y 9 0 + 68.734 0.0 0.0 6.6699 6.6699 87.79 0.0 0.0 0.0 24.296831374325905 7.7815125038364386 7.7815125038364386 7.7815125038364386 0 0.8494850021680094 2.0 0.0 0.2614393726401688 + + [TA]D{I|L}AQH{I|L}Y;[TA]D{I|L}AQHY{I|L};[TA]D{I|L}A[AG]H{I|L}Y;[TA]D{I|L}A[AG]HY{I|L};{[TV]|[{I|L}S]}[KC]QA{I|L}D[PG];{[TV]|[{I|L}S]}[KC][AG]A{I|L}D[PG];[VP][YR]D{I|L}D[PG] 6.6699;5.9148;5.5226;4.7675;3.4818;2.5925;1.5418 +;-;-;-;-;-;- + 286 + 1 2.163 50263.5 1.0 3248 3452 6693 DOHH2_400M_050219_1,6702 DOHH2_400M_050219_1,6702,ATDLAQHLY True True ATDLAQHLY 37.066606 516.26182860136 1699129.0 6693.0 nc|ENSG00000163492|Q6ZP82-1|CCDC141;;ENSG00000163492|ENST00000443758|CCDC141 7.897023836771647 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6703 37.071 255.0 374870.0 25 0 31614.0 + 42501 VTKVKEVL 8 108 458.2968642070408 0 458.2968017458916 PEAK CID FTMS 0 0 0 6693 238355.125 0.9344141654690477 -6 0.6475372314453125 10 Unmodified _VTKVKEVL_ REV__ENSG00000146535|ENST00000275364|GNA12;REV__ENST00000491117.5_1_7:2770817-2802736:-|nuORF;REV__nc|ENSG00000146535|Q03113-2|GNA12;REV__nc|ENSG00000146535|Q03113-3|GNA12 34.40172386719151 0.1907325408143214 1 V{I|L}{I|L}SK 5 -1 27.59 0.0 0.0 3.0167 0.0 0.0 131.09420361474935 240.09864221744377 371.19284583219314 0.0 0.0 0.0 0.0 0 0.7887254899964358 0.0 0.3494850021680094 0.0 V{I|L}{I|L}SK 3.0167 - 315 + 1 2.163 79947.8 1.0 3249 3452 6693 DOHH2_400M_050219_1,6703 DOHH2_400M_050219_1,6703,VTKVKEVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6704 37.075 167.0 261300.0 25 0 19057.0 + 43952 YGNVTSLGY 9 71 487.2352208790363 972.4558888248728 2 487.2352783083916 MULTI CID FTMS 0 0 0 6693 234334.140625 0.2049588491133792 2 -0.2494049072265625 11 Unmodified _YGNVTSLGY_ nc|ENSG00000186448|O14709-2|ZNF197 26.88365393820708 0.1891292719743517 1 [YG]{[DA]|[EG]}[KS]{I|L}GY 9 3 [YG]{[DA]|[EG]}[KS]{I|L} + + 25.969 15.118 2.0586 2.6705 2.6705 49.774 0.0 0.0 0.0 0.0 15.78803926680834 0.0 0.0 0 0.5 0.0 0.0 0.0 [YG]{[DA]|[EG]}[KS]{I|L}GY 2.6705 - 24 + 1 2.163 38895.7 1.0 3250 3452 6693 DOHH2_400M_050219_1,6704 DOHH2_400M_050219_1,6704,YGNVTSLGY False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6705 37.083 454.0 294270.0 25 0 67541.0 + 32768 SEDRSVRIW 9 110 574.2963815964025 1146.578210259605 2 574.2968627810478 MULTI CID FTMS 0 0 0 6693 206273.625 0.7239425343202684 1 -0.132659912109375 12 Unmodified _SEDRSVRIW_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 55.50274090549119 0.0285720310785888 1 {[ES]|[DT]|[{I|L}C]}DR[VS]R{I|L}W 9 0 + 43.316 0.0 0.0 3.7778 3.7778 80.271 0.0 0.0 0.0 23.851811074663715 14.97302484056647 14.97302484056647 9.208187539523747 0 1.4436726795685342 0.0 0.0 0.3807196863200844 + + {[ES]|[DT]|[{I|L}C]}DR[VS]R{I|L}W;{[ES]|[DT]|[{I|L}C]}D[VG][VS]R{I|L}W;{[ES]|[DT]|[{I|L}C]}DR[VS][VG]{I|L}W;W{I|L}[C(Carbamidomethyl (C))N][KQ]{I|L}W;[VS][WD][VS]R{I|L}W;{[ES]|[DT]|[{I|L}C]}[K{I|L}]WW{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}WW[RP]W;{[ES]|[DT]|[{I|L}C]}[K{I|L}]TDR{I|L}{[DA]|[EG]};[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}TDR{I|L}W;[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}WW{I|L}W 3.7778;2.9747;2.9747;2.713;2.3083;2.2385;1.6512;1.5643;1.4135;1.2845 +;-;-;-;-;-;-;-;-;- + 228 + 1 2.163 103584.4 1.0 3251 3452 6693 DOHH2_400M_050219_1,6705 DOHH2_400M_050219_1,6705,SEDRSVRIW True True SEDRSVRIW 37.082673 574.296862781048 9408739.625 6693.0 ENST00000420783.7_1_3:49044839-49051550:+|nuORF;;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;;ENST00000489684.2_1_3:49044864-49050780:+|nuORF;;ENSG00000178252|ENST00000608424|WDR6 5.694987773895264 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6706 37.089 351.0 271630.0 25 0 17852.0 + 16851 KIDENQLMY 9 134 577.2823525508649 1152.5501521685296 2 577.2819091677666 MULTI CID FTMS 0 0 0 6693 138033.5 0.4724211913333461 -1 0.1270866394042968 13 Unmodified _KIDENQLMY_ ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-7|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN;nc|ENSG00000112851|Q96RT1-9|ERBIN 39.94969957227396 0.0757326808254658 1 [AG]DDQ{I|L}K{I|L}MY 10 6 + 52.942 0.0 0.0 4.5935 4.5935 77.327 0.0 0.0 0.0 2.5874185669681538 35.95229386281659 2.5874185669681538 3.965267944305879 0 0.5 1.0 0.6989700043360187 1.110924374808178 [AG]DDQ{I|L}K{I|L}MY;{[QN]|[E{I|L}]|[KN]}{I|L}WW{I|L}MY;{[QN]|[E{I|L}]|[KN]}[RV]DD{I|L}MY;[AG]DD[AG]{I|L}K{I|L}MY;[{I|L}P]{[WT]|[RM]}DD{I|L}MY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RP]DD{I|L}MY;[AG]N{I|L}WW{I|L}MY;[AG]N[RV]DD{I|L}MY;[AG]GG{I|L}WW{I|L}MY;[YE][RK][C(Carbamidomethyl (C))R]{[QN]|[E{I|L}]|[KN]} 4.5935;4.2494;3.5405;3.5333;3.3777;3.1215;3.0223;2.9245;1.3519;0.44112 -;-;-;-;-;-;-;-;-;- 323 1 2.163 74927.6 1.0 3252 3452 6693 DOHH2_400M_050219_1,6706 DOHH2_400M_050219_1,6706,KIDENQLMY True True KIDENQLMY 37.089027 577.281909167767 1682338.625 6693.0 nc|ENSG00000112851|Q96RT1-9|ERBIN;;nc|ENSG00000112851|Q96RT1-3|ERBIN;;nc|ENSG00000112851|Q96RT1-5|ERBIN;;nc|ENSG00000112851|Q96RT1-2|ERBIN;;ENSG00000112851|ENST00000284037|ERBIN;;nc|ENSG00000112851|Q96RT1-4|ERBIN;;nc|ENSG00000112851|Q96RT1-8|ERBIN;;nc|ENSG00000112851|Q96RT1-6|ERBIN;;nc|ENSG00000112851|Q96RT1-7|ERBIN 4.136213461558024 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6707 37.098 536.0 333550.0 25 0 33533.0 + 24332 MEIGKTETF 9 169 528.2579747168955 1054.501396500591 2 528.2580444216728 MULTI CID FTMS 0 0 0 6693 100669.1875 0.3333546503878876 -1 0.1270866394042968 14 Unmodified _MEIGKTETF_ ENSG00000139618|ENST00000380152|BRCA2 57.72198328787511 0.0273433238377839 1 ME{I|L}G 4 5 52.557 0.0 0.0 4.984 0.0 0.0 0.0 621.2893770807249 621.2893770807249 17.364732270148686 0.0 0.0 0.0 0 0.716296407419885 1.6989700043360187 0.4247425010840047 0.0 + ME{I|L}G 4.984 + + 2036 + 1 2.163 137990.6 1.0 3253 3452 6693 DOHH2_400M_050219_1,6707 DOHH2_400M_050219_1,6707,MEIGKTETF True True MEIGKTETF 37.098452 528.258044421673 1596141.25 6693.0 ENSG00000139618|ENST00000380152|BRCA2 4.683746973673503 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6708 37.112 800.0 345050.0 25 0 37952.0 + 14365 IEVTPGDRSW 10 178 580.290757275081 1158.566961616962 2 580.2905761599541 MULTI CID FTMS 0 0 0 6693 97765.8671875 0.2083031105366689 -1 0.1270866394042968 15 Unmodified _IEVTPGDRSW_ ENSG00000196684|ENST00000613986|HSH2D;nc|ENSG00000196684|Q96JZ2-2|HSH2D 84.5221896805406 0.0133617038110099 1 {I|L}EVTPGDRC(Carbamidomethyl (C)){I|L} 10 2 + 105.4 0.0 0.0 9.0974 9.0974 89.285 0.0 0.0 0.0 26.9914767156516 5.082885525340785 5.082885525340785 5.082885525340785 0 1.8494850021680087 1.6989700043360187 1.524227503252014 0.7742275032520141 {I|L}EVTPGDRC(Carbamidomethyl (C)){I|L};{I|L}EVTPGDRSW;{I|L}EVTPGDRWS;{I|L}EVTPGDR[CG]{I|L};{I|L}EVTPGD{[WS]|[C(Carbamidomethyl (C)){I|L}]}R;{I|L}EVTPGDRMAA;{I|L}EVTPGD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GP;{I|L}EVT[C(Carbamidomethyl (C))N]{I|L}VDP;{I|L}EVTPYYQ{M(Oxidation (M))|F};{I|L}EVTPGD[QA]{[ET]|[MV]} 9.0974;8.6587;8.6111;8.3064;8.2588;8.167;7.8252;7.6132;7.577;7.4927 -;+;-;-;-;-;-;-;-;- + 5200 + 1 2.163 206237.4 0.5699999928474426 3254 3452 6693 DOHH2_400M_050219_1,6708 DOHH2_400M_050219_1,6708,IEVTPGDRSW True True IEVTPGDRSW 37.112283 580.290576159954 2627001.25 6693.0 nc|ENSG00000196684|Q96JZ2-2|HSH2D;;ENSG00000196684|ENST00000613986|HSH2D 6.630621433258057 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6709 37.127 800.0 401880.0 25 0 26882.0 + 30425 VTEKVYADTGLY 12 164 679.8462444028198 1357.6779358724395 2 679.8463012576103 MULTI CID FTMS 0 0 0 6693 95113.4140625 0.1005787634918855 -1 0.1270866394042968 16 Carbamidomethyl (C) _RC(Carbamidomethyl (C))TFNKVTGLY_ ENST00000312814.10_1_7:112430370-112430523:-|nuORF 53.40400417844725 0.0987786977674846 1 {[TV]|[{I|L}S]}ASVVYADTG{I|L}Y 13 8 + 131.5 0.0 0.0 9.6853 9.6853 83.256 0.0 0.0 0.0 11.160743531280843 16.642078980768076 11.160743531280843 0.1722032235195456 0 1.9489700043360187 1.3010299956639813 3.2332881222565253 0.0 {[TV]|[{I|L}S]}ASVVYADTG{I|L}Y;{[TV]|[{I|L}S]}GTVVYADTG{I|L}Y;{[TV]|[{I|L}S]}EKVYADTG{I|L}Y;{[TV]|[{I|L}S]}ASVVAYDTG{I|L}Y;{[TV]|[{I|L}S]}GTVVAYDTG{I|L}Y;{[TV]|[{I|L}S]}ASVVYGETG{I|L}Y;{[TV]|[{I|L}S]}ASVVGYETG{I|L}Y;{[TV]|[{I|L}S]}GTVVYGETG{I|L}Y;{[TV]|[{I|L}S]}GTVVGYETG{I|L}Y;{[TV]|[{I|L}S]}ASVVYADGT{I|L}Y 9.6853;9.6726;9.2924;9.1122;9.0995;8.9779;8.9779;8.9652;8.9652;8.9064 -;-;-;-;-;-;-;-;-;- 290518 1 2.163 235652.9 0.6000000238418579 3255 3452 6693 DOHH2_400M_050219_1,6709 DOHH2_400M_050219_1,6709,RCTFNKVTGLY True False VTEKVYADTGLY 37.127291 679.84630125761 14262507.0 6693.0 ENST00000312814.10_1_7:112430370-112430523:-|nuORF 7.638535022735596 2.0 False 12.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6710 37.141 800.0 61152.0 25 0 2810.5 + 7194 EEQLNRYEMY 10 97 687.8047979463291 0 687.8044921755791 PEAK CID FTMS 0 0 0 6693 87106.796875 1.0 0 0.0 17 Unmodified _EEQLNRYEMY_ ENSG00000064995|ENST00000361288|TAF11;nc|ENSG00000064995|Q15544-2|TAF11 43.9818466556824 0.0820936144366115 1 Q{I|L}N 3 7 18.94 0.0 0.0 1.3789 0.0 0.0 258.0885528109723 757.3022554986936 1015.390808309666 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + Q{I|L}N 1.3789 + + 109 + 1 2.163 41722.7 0.550000011920929 3256 3452 6693 DOHH2_400M_050219_1,6710 DOHH2_400M_050219_1,6710,EEQLNRYEMY True True EEQLNRYEMY 37.141123 687.804492175579 322274.96875 6693.0 ENSG00000064995|ENST00000361288|TAF11;;nc|ENSG00000064995|Q15544-2|TAF11 7.565691312154134 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6711 37.156 800.0 265330.0 25 0 31302.0 2927 AVGTHRGK 8 156 825.4700399922955 824.4627635256954 1 825.4695922732353 MULTI CID FTMS 0 0 0 6693 190786.25 0.6968574777182664 -2 0.2296104431152343 18 Unmodified _AVGTHRGK_ ENSG00000177943|ENST00000317446|MAMDC4;ENST00000485732.5_1_9:139747929-139748217:+|nuORF;nc|ENSG00000177943|Q6UXC1-3|MAMDC4;nc|ENSG00000177943|Q6UXC1|MAMDC4 2.302733041254933 0.8103549651115762 1 {NN|[MP]|[D{I|L}]|[EV]}YMEG 6 6 24.377 0.0 0.0 2.9567 0.0 0.0 0.0 113.15696322097908 113.15696322097908 14.288180044052137 0.0 0.0 0.0 0 0.0 0.0 0.3882104921644452 0.2614393726401688 {NN|[MP]|[D{I|L}]|[EV]}YMEG 2.9567 - 528 1 2.163 150640.0 0.7599999904632568 3257 3452 6693 DOHH2_400M_050219_1,6711 DOHH2_400M_050219_1,6711,AVGTHRGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6712 37.161 236.0 403440.0 25 0 48562.0 + 5504 DLVELEVAFP 10 105 566.2987642865877 1130.5829756399753 2 566.2985717654228 MULTI CID FTMS 0 0 0 6693 175625.640625 1.0 0 0.0 19 Unmodified _DLVELEVAFP_ REV__ENSG00000205669|ENST00000645972|ACOT6 10.073929032068715 0.6785112666868882 1 {[YC]|[HE]}A{M(Oxidation (M))|F}{I|L}EQ 7 -1 23.918 0.0 0.0 2.1155 0.0 0.0 0.0 273.16798984964333 273.16798984964333 1.4435694977913016 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[YC]|[HE]}A{M(Oxidation (M))|F}{I|L}EQ 2.1155 - 704 1 2.163 78017.6 1.0 3258 3452 6693 DOHH2_400M_050219_1,6712 DOHH2_400M_050219_1,6712,DLVELEVAFP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6713 37.174 800.0 54310.0 25 0 11809.0 -1 0 49 1096.101253257914 3285.2819303739416 3 1096.434985339642 MULTI CID FTMS 0 0 0 6693 143524.390625 1.0 0 0.0 20 1 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.16694 0.0 0.0 2396.92054420988 738.2724093072874 3135.192953517167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.16694 - 20 + 1 2.163 45177.1 0.6200000047683716 3259 3452 6693 DOHH2_400M_050219_1,6713 DOHH2_400M_050219_1,6713, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6715 37.18 57.0 929170.0 25 0 188550.0 16795 KGLGGTRH 8 83 413.2388644783535 824.463176023507 2 413.2382690310478 MULTI CID FTMS 0 0 0 6714 1011008.6875 0.7606939692760528 -4 0.4877204895019531 1 Unmodified _KGLGGTRH_ ENST00000305850.9_1_16:81040200-81040455:+|nuORF 2.302733041254933 0.8103549651115762 1 M 1 8 1.5938 0.0 0.0 0.19331 0.0 0.0 411.2484065916695 279.14548669986567 690.3938932915352 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.19331 - 4 + 1 2.166 48489.1 1.0 3260 3453 6714 DOHH2_400M_050219_1,6715 DOHH2_400M_050219_1,6715,KGLGGTRH False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6716 37.184 210.0 230930.0 25 0 15257.0 11577 GKKVWIGI 8 98 450.7852922212809 899.5560315093618 2 450.7851135134697 MULTI CID FTMS 0 0 0 6714 63534.16015625 0.0771858355786941 2 -0.2149696350097656 2 Unmodified _GKKVWIGI_ ENSG00000073969|ENST00000398238|NSF;nc|ENSG00000073969|P46459-2|NSF 9.347437153973935 0.7675937258251505 1 [KG]T{I|L} 4 5 14.693 0.0 0.0 1.6333 0.0 0.0 0.0 497.2837618463501 497.2837618463501 1.1978875828839364 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [KG]T{I|L} 1.6333 - 74 + 1 2.166 44156.4 1.0 3261 3453 6714 DOHH2_400M_050219_1,6716 DOHH2_400M_050219_1,6716,GKKVWIGI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6717 37.185 54.0 1615900.0 25 0 148280.0 + 38182 TPRHIIVRF 9 97 380.2332108836047 1137.6778032510142 3 380.2327758669853 MULTI CID FTMS 0 0 0 6714 1022613.5 0.1106683126367778 -2 0.2597465515136719 3 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 34.221707139014875 0.1071766711162635 1 T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}[RV] 9 2 + 50.864 0.0 0.0 4.4708 4.4708 72.22 0.0 0.0 0.0 13.46787486224656 0.5237875363565792 0.5237875363565792 0.5237875363565792 0 1.1989700043360187 0.0 0.0 0.0 T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}[RV];T[RP]H{I|L}{I|L}V[R{M(Oxidation (M))|F}];T[RP]H{I|L}{M(Oxidation (M))|F}{I|L}[RV];T[RP]H{M(Oxidation (M))|F}{I|L}{I|L}[RV] 4.4708;4.4248;4.2062;3.1489 -;+;-;- + 125 + 1 2.166 72583.3 1.0 3262 3453 6714 DOHH2_400M_050219_1,6717 DOHH2_400M_050219_1,6717,TPRHIIVRF True True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6718 37.19 257.0 634780.0 25 0 60262.0 + 19771 AVRPKYLL 8 113 480.30571685951634 958.5968807858328 2 480.3056213259697 MULTI CID FTMS 0 0 0 6714 437032.625 0.617654865704986 -1 0.132659912109375 4 Unmodified _LGRLFQLL_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 44.40701690623563 0.1655546087385432 1 {[VA]|[{I|L}G]}R[KP]Y{I|L}{I|L} 8 3 + 56.151 0.0 0.0 5.8577 5.8577 85.48 0.0 0.0 0.0 15.66946789630613 45.46047773713831 15.66946789630613 8.010299956639813 0 1.579689690656103 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}R[KP]Y{I|L}{I|L};{[VA]|[{I|L}G]}R[KP]{I|L}Y{I|L};[Y{I|L}][KP]RG{I|L}{I|L};[KP]Y{I|L}RG{I|L}{I|L};[KP]R{[VA]|[{I|L}G]}Y{I|L}{I|L};[KP]R[Y{I|L}]G{I|L}{I|L};[KP]R{[VA]|[{I|L}G]}{I|L}Y{I|L} 5.8577;5.022;3.6561;3.2117;2.4107;1.7827;1.5751 -;-;-;-;-;-;- 254 1 2.166 126736.7 1.0 3263 3453 6714 DOHH2_400M_050219_1,6718 DOHH2_400M_050219_1,6718,LGRLFQLL False False AVRPKYLL 37.189885 480.30562132597 4008121.0 6714.0 ENSG00000134057|ENST00000256442|CCNB1;;nc|ENSG00000134057|P14635-2|CCNB1 2.0744221806526184 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6719 37.193 149.0 655420.0 25 0 43618.0 + 513 AEHFLEQQM 9 103 566.7582753804089 1131.5019978276175 2 566.7585937380791 MULTI CID FTMS 0 0 0 6714 385579.75 0.2720029473236443 -1 0.132659912109375 5 Unmodified _AEHFLEQQM_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 49.93300154707207 0.0405168250806675 1 [AG]MQP{I|L}EQQM 10 4 + 65.913 0.0 0.0 5.8253 5.8253 86.551 0.0 0.0 0.0 9.916440611282624 14.146518864155126 9.916440611282624 9.164539485499256 0 0.3494850021680094 1.5228787452803376 0.7742275032520141 0.2614393726401688 [AG]MQP{I|L}EQQM;[AG]MQP{I|L}EQ[AG]M;[AG]MQP{I|L}E[AG]QM;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QP{I|L}EQQM;[AG]M[AG]P{I|L}EQQM;[AG]MQP{I|L}E[AG][AG]M;[YN]QE{I|L}P[HT]M;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[AG]P{I|L}EQQM;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QP{I|L}EQ[AG]M;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QP{I|L}E[AG]QM 5.8253;5.0153;5.0153;4.9489;4.7843;4.2086;4.1475;4.1351;4.1351;4.1351 -;-;-;-;-;-;-;-;-;- 645 1 2.166 78784.0 1.0 3264 3453 6714 DOHH2_400M_050219_1,6719 DOHH2_400M_050219_1,6719,AEHFLEQQM True True AEHFLEQQM 37.192862 566.758593738079 22288537.5 6714.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 9.426311333974205 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6720 37.196 152.0 447900.0 25 0 72131.0 + 42707 VVAGDRPR 8 108 435.2515280440389 868.4885031548779 2 435.2513305544853 MULTI CID FTMS 0 0 0 6714 337845.5 0.2372109074236733 -16 1.8249549865722656 6 Unmodified _VVAGDRPR_ REV__ENSG00000116329|ENST00000234961|OPRD1 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.166 57587.8 1.0 3265 3453 6714 DOHH2_400M_050219_1,6720 DOHH2_400M_050219_1,6720,VVAGDRPR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6721 37.202 345.0 408750.0 25 0 40722.0 + 44122 YLDHNSFDY 9 159 587.2462708079368 1172.4779886826734 2 587.7477294802666 MULTI CID FTMS 0 0 0 6714 216588.640625 0.5057234343364178 -1 0.132659912109375 7 Unmodified _YLDHNSFDY_ ENSG00000174123|ENST00000308973|TLR10 56.17704186161178 0.0281986971544335 1 [HD]NS{M(Oxidation (M))|F}D{I|L}YY 9 4 + 57.696 0.0 0.0 4.9209 4.9209 73.695 0.0 0.0 0.0 2.592254816411156 14.973024840566469 2.592254816411156 0.4252671034466573 0 0.6989700043360187 0.744727494896694 0.5387254899964358 0.7059771852360797 [HD]NS{M(Oxidation (M))|F}D{I|L}YY;[HD]N{I|L}YS{M(Oxidation (M))|F}DY;[Y{I|L}]HDNS{M(Oxidation (M))|F}DY;{[YD]|[{M(Oxidation (M))|F}M]}ANHD{I|L}YY;{[YD]|[{M(Oxidation (M))|F}M]}[H{I|L}]NS{M(Oxidation (M))|F}DY;[HD]NS{M(Oxidation (M))|F}[Y{I|L}]DY;{[YD]|[{M(Oxidation (M))|F}M]}A[RH]S{M(Oxidation (M))|F}DY;[HD][Y{I|L}]NS{M(Oxidation (M))|F}DY;{[YD]|[{M(Oxidation (M))|F}M]}ANH[Y{I|L}]DY;[HD]NS[Y{I|L}]{M(Oxidation (M))|F}DY 4.9209;4.8846;4.6998;4.6565;4.512;4.3041;4.2553;4.0556;4.0397;3.9625 -;-;-;-;-;-;-;-;-;- 1455 1 2.166 106985.0 1.0 3266 3453 6714 DOHH2_400M_050219_1,6721 DOHH2_400M_050219_1,6721,YLDHNSFDY True True YLDHNSFDY 37.202124 587.2468 3656563.25 6714.0 ENSG00000174123|ENST00000308973|TLR10 7.51135269800822 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6722 37.21 423.0 209690.0 25 0 15757.0 -1 0 88 881.912115665572 1761.8096783979438 2 881.9135619997978 MULTI CID FTMS 0 0 0 6714 205791.046875 1.0 0 0.0 8 1 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQA[K{I|L}][{M(Oxidation (M))|F}E]Q 15 -1 + 79.307 0.0 0.0 4.5015 4.5015 73.67 0.0 0.0 0.0 1.556649761518969 1.556649761518969 1.556649761518969 1.556649761518969 0 1.3494850021680094 0.0 0.0 1.1989700043360187 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQA[K{I|L}][{M(Oxidation (M))|F}E]Q;[NP]{I|L}N[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQA[K{I|L}]M{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQRR[{M(Oxidation (M))|F}E]Q;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQ{I|L}AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[QP]AQAEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[QP]A[AG]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[QP]AQAEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[YQ]MRRQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.5015;4.4131;4.2031;4.1217;3.9063;3.9015;3.9015;3.9015;3.9015;3.8234 -;-;-;-;-;-;-;-;-;- 908 + 1 2.166 66309.0 1.0 3267 3453 6714 DOHH2_400M_050219_1,6722 DOHH2_400M_050219_1,6722, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6723 37.224 800.0 721360.0 25 0 132560.0 + 38185 TPRHIIVRF 9 171 569.8458678855573 1137.6771828379144 2 569.8457519412041 MULTI CID FTMS 0 0 0 6714 196129.671875 0.0871687624263916 -2 0.2597465515136719 9 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 87.12335221954112 0.015790840925931 1 TPRH{I|L}{I|L}VR{M(Oxidation (M))|F} 9 0 + 94.299 0.0 0.0 8.2887 8.2887 83.137 0.0 0.0 0.0 21.46688957819582 0.796896906561031 0.796896906561031 0.796896906561031 0 2.927825934852436 0.958607314841775 0.0 1.8882104921644447 + + TPRH{I|L}{I|L}VR{M(Oxidation (M))|F};TPRH{I|L}{I|L}V{M(Oxidation (M))|F}R;TRPH{I|L}{I|L}VR{M(Oxidation (M))|F};TRPH{I|L}{I|L}V{M(Oxidation (M))|F}R;[TP]RH{I|L}{I|L}VR{M(Oxidation (M))|F};TPRH{I|L}{M(Oxidation (M))|F}[{I|L}V]R;TP[H{I|L}]R{I|L}VR{M(Oxidation (M))|F};TP[H{I|L}]R{I|L}V{M(Oxidation (M))|F}R;TPRH{I|L}{M(Oxidation (M))|F}[RV]{I|L};TRPH{I|L}{M(Oxidation (M))|F}[{I|L}V]R 8.2887;8.2187;6.8883;6.8182;6.4018;5.4741;5.348;5.278;4.6616;4.0736 +;-;-;-;+;-;-;-;-;- + 1135 + 1 2.166 428930.3 0.800000011920929 3268 3453 6714 DOHH2_400M_050219_1,6723 DOHH2_400M_050219_1,6723,TPRHIIVRF True True TPRHIIVRF 37.223524 569.845751941204 211972110.0 6714.0 nc|ENSG1000|Q9UN81|L1_ORF1 6.611446062723796 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6724 37.231 435.0 546610.0 25 0 99438.0 + 44007 YIDSKFEDY 9 126 590.2646543066221 1178.514755680044 2 590.2638427615166 MULTI CID FTMS 0 0 0 6714 185658.171875 0.1157387009923463 -2 0.2597465515136719 10 Unmodified _YIDSKFEDY_ ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000398921.6_1_7:45788229-45798731:-|nuORF;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;ENST00000428867.1_1_7:45797631-45798728:-|nuORF;ENST00000429741.5_1_7:45796578-45798731:-|nuORF;ENST00000449219.2_1_1:224190265-224197055:+|nuORF;ENST00000473201.1_1_7:35903172-35913395:+|nuORF;ENST00000475109.5_1_7:35903172-35919218:+|nuORF;ENST00000489259.5_1_10:38674311-38691690:-|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7 90.13494162714682 0.0149365284241176 1 Y{I|L}DSK{M(Oxidation (M))|F}EDY 9 0 + 100.09 0.0 0.0 8.4926 8.4926 95.833 0.0 0.0 0.0 44.49839547105395 14.973024840566469 14.973024840566469 14.627253848364631 0 1.8243923658886183 2.0 1.705112052208703 0.0 + + Y{I|L}DSK{M(Oxidation (M))|F}EDY;[Y{I|L}]DQSD{I|L}YY;[Y{I|L}]DQSDY{I|L}Y;[Y{I|L}]QDSD{I|L}YY;[Y{I|L}]QDSDY{I|L}Y;[Y{I|L}]D[AG]SD{I|L}YY;[Y{I|L}]DQS{I|L}DYY;[Y{I|L}]D[AG]SDY{I|L}Y;[Y{I|L}]DQS{I|L}YDY;Y{I|L}DS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}{I|L}Y 8.4926;7.2514;7.1249;6.6389;6.5124;6.4701;6.4175;6.3435;6.3115;6.2796 +;-;-;-;-;-;-;-;-;- + 4484 + 1 2.166 176078.3 1.0 3269 3453 6714 DOHH2_400M_050219_1,6724 DOHH2_400M_050219_1,6724,YIDSKFEDY True True YIDSKFEDY 37.231266 590.263842761517 11150992.0 6714.0 ENST00000429741.5_1_7:45796578-45798731:-|nuORF;;ENST00000428867.1_1_7:45797631-45798728:-|nuORF;;ENSG00000122545|ENST00000350320|SEPTIN7;;ENST00000473201.1_1_7:35903172-35913395:+|nuORF;;ENST00000489259.5_1_10:38674311-38691690:-|nuORF;;ENST00000398921.6_1_7:45788229-45798731:-|nuORF;;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;;ENST00000475109.5_1_7:35903172-35919218:+|nuORF;;nc|ENSG00000122545|Q16181-2|SEPTIN7;;ENST00000449219.2_1_1:224190265-224197055:+|nuORF 6.749003092447917 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6725 37.24 485.0 229080.0 25 0 42159.0 + 10313 FSDKELAAY 9 141 522.2552648300596 1042.495976726919 2 522.2559081912041 MULTI CID FTMS 0 0 0 6714 160128.6875 1.0 0 0.0 11 Unmodified _FSDKELAAY_ ENSG00000005471|ENST00000649586|ABCB4;nc|ENSG00000005471|P21439-3|ABCB4;nc|ENSG00000005471|P21439|ABCB4 34.40172386719151 0.1061884637610825 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WW{I|L}AAY 8 3 + 59.896 0.0 0.0 5.7454 5.7454 83.335 0.0 0.0 0.0 13.06425027550688 16.40978057358332 13.06425027550688 6.020599913279625 0 1.0 1.3979400086720375 0.75 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WW{I|L}AAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WWA{I|L}AY;{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]C{I|L}AAY;{NN|[MP]|[D{I|L}]|[EV]}[VG]H[TP]AAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{[ET]|[MV]}R{I|L}AY;[YE][WK]{I|L}AAY;{NN|[MP]|[D{I|L}]|[EV]}[RH][TP]AAY;{[QN]|[E{I|L}]|[KN]}AAH[TP]AAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{[ET]|[MV]}VVAAY;{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]CA{I|L}AY 5.7454;5.1679;4.4922;4.428;4.2537;4.2087;4.0902;4.0666;3.948;3.9147 -;-;-;-;-;-;-;-;-;- 748 1 2.166 90575.7 1.0 3270 3453 6714 DOHH2_400M_050219_1,6725 DOHH2_400M_050219_1,6725,FSDKELAAY True True FSDKELAAY 37.239862 522.255908191204 1059263.25 6714.0 ENSG00000005471|ENST00000649586|ABCB4;;nc|ENSG00000005471|P21439|ABCB4;;nc|ENSG00000005471|P21439-3|ABCB4 5.743572235107422 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6726 37.254 800.0 200910.0 25 0 13770.0 -1 0 125 865.8993730714867 1729.784193209773 2 866.4013549685478 MULTI CID FTMS 0 0 0 6714 148824.6875 0.4879467954090446 -2 0.2597465515136719 12 1 N{M(Oxidation (M))|F}PN{I|L}NADQ 9 -1 79.691 0.0 0.0 4.607 0.0 0.0 0.0 713.3395603131328 713.3395603131328 53.48767215588211 0.0 0.0 0.0 0 1.3807196863200843 0.0 0.0 1.1549471895720984 N{M(Oxidation (M))|F}PN{I|L}NADQ 4.607 - 1159 + 1 2.166 107542.3 0.7099999785423279 3271 3453 6714 DOHH2_400M_050219_1,6726 DOHH2_400M_050219_1,6726, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6727 37.269 800.0 124080.0 25 0 10067.0 20132 LKNLVRLP 8 116 476.819433772436 951.624314611672 2 476.8189269900322 MULTI CID FTMS 0 0 0 6714 140975.4375 1.0 0 0.0 13 Unmodified _LKNLVRLP_ ENST00000609274.5_2_19:15562735-15563116:-|nuORF 12.531546534597751 0.7257836412119636 1 {I|L}K 2 6 19.068 0.0 0.0 2.0037 0.0 0.0 0.0 707.4225289301389 707.4225289301389 5.612431371158735 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + {I|L}K 2.0037 + + 87 + 1 2.166 81818.1 0.5400000214576721 3272 3453 6714 DOHH2_400M_050219_1,6727 DOHH2_400M_050219_1,6727,LKNLVRLP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6728 37.271 103.0 454710.0 25 0 25907.0 + 31336 RMNSKIMSL 9 87 540.288586058312 1078.562619183424 2 540.2891723513603 MULTI CID FTMS 0 0 0 6714 135169.6875 0.4256798489316449 -1 0.132659912109375 14 Unmodified _RMNSKIMSL_ ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2 27.628801355627647 0.1796483985696185 1 {[MS]|[{M(Oxidation (M))|F}A]}M{I|L}K[RN]{[CP]|[EA]} 9 7 + 48.636 0.0 0.0 4.5093 4.5093 81.033 0.0 0.0 0.0 0.0 0.0 0.0 8.979400086720368 0 0.5 1.5228787452803376 0.8807196863200843 0.4247425010840047 {[MS]|[{M(Oxidation (M))|F}A]}M{I|L}K[RN]{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}MK[RN]{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}[RN]K{I|L}S{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}T][C(Carbamidomethyl (C))N]K{I|L}M{[TV]|[{I|L}S]};[VP][YE]K{I|L}M{[TV]|[{I|L}S]};[{I|L}T][C(Carbamidomethyl (C))N]KM{I|L}{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}[RN]K[VP][{M(Oxidation (M))|F}T];[{I|L}T][C(Carbamidomethyl (C))N]K{I|L}S{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[VP][YE]KM{I|L}{[TV]|[{I|L}S]};[VP][YE]K{I|L}S{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.5093;3.6768;3.4875;2.9227;2.5929;2.0901;1.9595;1.9009;1.7604;1.5711 -;-;-;-;-;-;-;-;-;- 120 + 1 2.166 41167.1 1.0 3273 3453 6714 DOHH2_400M_050219_1,6728 DOHH2_400M_050219_1,6728,RMNSKIMSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6729 37.285 800.0 61431.0 25 0 3938.7 + 43251 WEELCFFFFFY 11 78 789.3458651145695 1576.677177295939 2 789.3465453982353 MULTI CID FTMS 0 0 0 6714 92552.0 1.0 0 0.0 15 Unmodified _WEELCFFFFFY_ REV__ENST00000401990.5_1_2:242255386-242257729:+|nuORF;REV__ENST00000429791.5_1_2:242255882-242265429:+|nuORF;REV__ENST00000436795.5_2_2:242255386-242265429:+|nuORF 3.2813086475875832 0.8596665074481906 1 QQDA{M(Oxidation (M))|F}Y 6 -1 43.148 0.0 0.0 2.7367 0.0 0.0 806.3545596508344 0.0 806.3545596508344 0.0 21.95046257204389 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.6989700043360187 QQDA{M(Oxidation (M))|F}Y 2.7367 - 289 1 2.166 40450.1 0.4699999988079071 3274 3453 6714 DOHH2_400M_050219_1,6729 DOHH2_400M_050219_1,6729,WEELCFFFFFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6730 37.288 99.0 574670.0 25 0 106600.0 + 29621 QMDPSSNFY 9 89 544.7211388515586 1087.4277247699172 2 544.7208129763603 MULTI CID FTMS 0 0 0 6714 145602.359375 0.2073694126171418 -2 0.2597465515136719 16 Unmodified _QMDPSSNFY_ ENSG00000138670|ENST00000264400|RASGEF1B;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B 54.773552608820026 0.0299037012502309 1 [PS]SND{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}Y 9 6 + 31.07 0.0 0.0 2.8572 2.8572 67.995 0.0 0.0 0.0 6.478848682262949 6.684823361699216 6.478848682262949 0.8068176020888131 0 0.7742275032520141 1.0 1.0189301784845295 0.3807196863200844 [PS]SND{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}Y;[PS]SC[PS][NS]{M(Oxidation (M))|F}Y;[PS]SGGD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}Y;[PS]SC[VG][DN]{M(Oxidation (M))|F}Y;[PS]D{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[NS]{M(Oxidation (M))|F}Y;[VG]DND{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}Y;[VG]DC[PS][NS]{M(Oxidation (M))|F}Y;[VG]DGGD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}Y;[PS]D[KC][DN]{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D[PS][NS]{M(Oxidation (M))|F}Y 2.8572;2.783;2.6691;2.4852;2.3454;2.2614;2.1872;2.0733;2.0475;2.0414 -;-;-;-;-;-;-;-;-;+ + 313 1 2.166 47033.5 1.0 3275 3453 6714 DOHH2_400M_050219_1,6730 DOHH2_400M_050219_1,6730,QMDPSSNFY True True QMDPSSNFY 37.288376 544.72081297636 9237229.0 6714.0 ENSG00000138670|ENST00000264400|RASGEF1B;;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B;;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B 6.730643272399902 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6731 37.291 149.0 412670.0 25 0 66167.0 + -1 DAYALNHTL 9 93 509.25371102170106 508.2464345551011 1 509.2539550662041 MULTI CID FTMS 0 0 0 6714 107087.15625 0.3590585778267309 -1 0.132659912109375 17 ENSG00000110777|ENST00000393067|POU2AF1 1 {[DA]|[EG]}YA 4 -1 24.922 0.0 0.0 4.9034 0.0 0.0 0.0 85.05802448113545 85.05802448113545 12.1573152140785 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}YA 4.9034 - 61 1 2.166 51100.8 1.0 3276 3453 6714 DOHH2_400M_050219_1,6731 DOHH2_400M_050219_1,6731, False False DAYALNHTL 37.29134 509.253955066204 1578217.625 6714.0 ENSG00000110777|ENST00000393067|POU2AF1 9.155047257741291 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6733 37.297 158.0 465420.0 25 0 40240.0 + 44262 YLKVKGNVF 9 107 534.3159900144643 1066.6174270957283 2 534.3162719607353 MULTI CID FTMS 0 0 0 6732 169383.609375 0.0872624754043412 2 -0.18389892578125 1 Unmodified _YLKVKGNVF_ ENSG00000108298|ENST00000225430|RPL19;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;ENST00000429272.1_1_2:131051524-131051887:+|nuORF;ENST00000472309.1_1_4:179208113-179208287:+|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 34.10243960390752 0.1078313939113124 1 Y{I|L}KV 4 5 56.089 0.0 0.0 5.2585 0.0 0.0 0.0 560.2840670221311 560.2840670221311 37.33288122256525 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.3252574989159953 + Y{I|L}KV 5.2585 + + 240 + 1 2.166 63007.1 1.0 3277 3454 6732 DOHH2_400M_050219_1,6733 DOHH2_400M_050219_1,6733,YLKVKGNVF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6734 37.299 106.0 733130.0 25 0 218980.0 -1 0 88 398.23045629931806 794.4463596654361 2 398.2303649783134 MULTI CID FTMS 0 0 0 6732 445431.34375 0.9714374760868644 1 -0.0982246398925781 2 1 D 1 -1 1.9897 0.0 0.0 0.25045 0.0 0.0 397.2535662883494 279.1463411920532 676.3999074804026 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.25045 - 2 + 1 2.166 68181.0 1.0 3278 3454 6732 DOHH2_400M_050219_1,6734 DOHH2_400M_050219_1,6734, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6735 37.301 97.0 667320.0 25 0 75319.0 + 24463 MIDPSGVSY 9 94 484.7231434006279 967.431733868056 2 484.7234374880791 MULTI CID FTMS 0 0 0 6732 654428.5625 1.0 0 0.0 3 Unmodified _MIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 28.486842064014134 0.1687311288560894 1 [PS]GDVM{I|L}SY 9 6 + 39.833 0.0 0.0 4.1174 4.1174 70.573 0.0 0.0 0.0 10.140018587458576 10.809574678604733 10.140018587458576 0.2422750325201406 0 0.8935078169319297 0.9208187539523752 0.5649093276264391 0.0 [PS]GDVM{I|L}SY;[PS]GVDM{I|L}SY;[PS]GVMEVSY;[PS]GVMD{I|L}SY;[PS]DGVM{I|L}SY;[VG]SPMEVSY;[VG]SPDM{I|L}SY;{[QD]|[EN]|[WG]|[KD]|[RS]}PMEVSY;{[QD]|[EN]|[WG]|[KD]|[RS]}PDM{I|L}SY;[VG]SPMD{I|L}SY 4.1174;4.0924;4.0924;3.7812;3.5585;3.0693;3.0693;2.9274;2.9274;2.7581 -;-;-;-;-;-;-;-;-;- 346 1 2.166 54613.5 1.0 3279 3454 6732 DOHH2_400M_050219_1,6735 DOHH2_400M_050219_1,6735,MIDPSGVSY False True MIDPSGVSY 37.301224 484.723437488079 3774420.25 6732.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 2.9043054779370627 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6736 37.311 561.0 303870.0 25 0 54317.0 + 5995 DRNIRYVAL 9 157 560.31705560341 1118.61955827362 2 560.3173705935478 MULTI CID FTMS 0 0 0 6732 154856.71875 0.8237892745634262 -1 0.1167449951171875 4 Unmodified _DRNIRYVAL_ ENSG00000213983|ENST00000397120|AP1G2;ENST00000535852.6_1_14:24028960-24035624:-|nuORF 20.453626601364224 0.2830276176381075 1 D{I|L} 2 7 26.99 0.0 0.0 2.4128 0.0 0.0 0.0 887.4866714328264 887.4866714328264 -1.6476107593161302 0.0 -1.6476107593161302 0.0 0 0.0 0.6020599913279624 0.0 0.0 D{I|L} 2.4128 - 949 + 1 2.166 132477.6 1.0 3280 3454 6732 DOHH2_400M_050219_1,6736 DOHH2_400M_050219_1,6736,DRNIRYVAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6737 37.325 800.0 135300.0 25 0 12996.0 + 10320 FSDSESADSLY 11 143 610.7512001433842 1219.4878473535682 2 610.7520019412041 MULTI CID FTMS 0 0 0 6732 137492.359375 1.0 0 0.0 5 Unmodified _FSDSESADSLY_ ENSG00000102760|ENST00000379359|RGCC;nc|ENSG00000102760|Q9H4X1-2|RGCC 78.7280429016045 0.0086025745061204 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSESADS[Y{I|L}] 11 0 + 46.345 0.0 0.0 3.8004 3.8004 76.149 0.0 0.0 0.0 7.992110618864757 4.981979378655886 4.981979378655886 5.555173278498323 0 0.4247425010840047 1.2218487496163564 2.048455006504028 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSESADS[Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSESWS[Y{I|L}];{[DS]|[MA]|[CV]|TT}AYESADS[Y{I|L}];{[DA]|[EG]}SYESADS[Y{I|L}];{[ES]|[DT]|[{I|L}C]}GYESADS[Y{I|L}];{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}SESADS[Y{I|L}];{[DA]|[EG]}YSESADS[Y{I|L}];[YE]GSESADS[Y{I|L}];{[DS]|[MA]|[CV]|TT}AYESWS[Y{I|L}];{[SA]|[TG]}DYESADS[Y{I|L}] 3.8004;3.3448;3.145;3.1018;2.9737;2.9086;2.8654;2.7509;2.6895;2.6609 +;-;-;-;-;-;-;-;-;- + 891 1 2.166 84133.6 0.6700000166893005 3281 3454 6732 DOHH2_400M_050219_1,6737 DOHH2_400M_050219_1,6737,FSDSESADSLY True True FSDSESADSLY 37.324903 610.752001941204 919138.0 6732.0 ENSG00000102760|ENST00000379359|RGCC;;nc|ENSG00000102760|Q9H4X1-2|RGCC 5.724092801411946 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6738 37.339 800.0 151100.0 25 0 14928.0 -1 MLKEDDMFKDF 11 118 725.8155112202292 1449.6164695072582 2 725.8151733279228 MULTI CID FTMS 0 0 0 6732 130264.34375 1.0 0 0.0 6 2 Oxidation (M) _M(Oxidation (M))LKEDDM(Oxidation (M))FKDF_ ENSG00000110841|ENST00000228425|PPFIBP1;nc|ENSG00000110841|Q86W92-3|PPFIBP1;nc|ENSG00000110841|Q86W92-4|PPFIBP1;nc|ENSG00000110841|Q86W92|PPFIBP1 15.248480904072842 0.7179608125786238 1 [HD]EAQQDA{M(Oxidation (M))|F}YQV 12 -1 + 79.72 0.0 0.0 5.4994 5.4994 82.964 0.0 0.0 0.0 3.556518697048716 58.04635881454461 3.556518697048716 6.611814434466183 0 0.8139919831912392 0.0 0.9386218330464624 1.1382104921644451 [HD]EAQQDA{M(Oxidation (M))|F}YQV;[HD]EAQQW{M(Oxidation (M))|F}YQV;[HD]EAQ[AG]DA{M(Oxidation (M))|F}YQV;[HD]EA[AG]QDA{M(Oxidation (M))|F}YQV;[YQ]{[QC]|[C(Carbamidomethyl (C))A]}WDA{M(Oxidation (M))|F}YQV;[HD]EA[AG]QW{M(Oxidation (M))|F}YQV;[HD]EAQ[AG]W{M(Oxidation (M))|F}YQV;{NN|[MP]|[D{I|L}]|[EV]}Y[WM]DA{M(Oxidation (M))|F}YQV;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQDA{M(Oxidation (M))|F}YQV;{NN|[MP]|[D{I|L}]|[EV]}Y[WM]W{M(Oxidation (M))|F}YQV 5.4994;5.0433;4.8718;4.8718;4.4847;4.4136;4.4136;4.406;4.214;3.9524 -;-;-;-;-;-;-;-;-;- 925 1 2.166 87064.0 0.6600000262260437 3282 3454 6732 DOHH2_400M_050219_1,6738 DOHH2_400M_050219_1,6738,MLKEDDMFKDF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6739 37.353 800.0 171900.0 25 0 25447.0 + 28439 PTDGPPNSFY 10 136 547.7426796577605 1093.470806382321 2 547.7436401247978 MULTI CID FTMS 0 0 0 6732 108217.0234375 1.0 0 0.0 7 Unmodified _PTDGPPNSFY_ ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11 39.94969957227396 0.1580982266129622 1 S[NP]QGTY 7 8 34.741 0.0 0.0 3.1772 0.0 0.0 328.1414402412175 0.0 328.1414402412175 0.0 23.32125609449678 0.0 0.0 0 0.5 0.0 0.5 0.7742275032520141 S[NP]QGTY 3.1772 - 634 + 1 2.166 107116.2 0.5699999928474426 3283 3454 6732 DOHH2_400M_050219_1,6739 DOHH2_400M_050219_1,6739,PTDGPPNSFY False True PTDGPPNSFY 37.352565 547.743640124798 1337656.75 6732.0 nc|ENSG00000072803|Q9UKB1-2|FBXW11;;nc|ENSG00000072803|Q9UKB1-3|FBXW11;;nc|ENSG00000072803|Q9UKB1|FBXW11;;ENSG00000072803|ENST00000517395|FBXW11 2.150404373804728 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6740 37.364 672.0 163650.0 25 0 18731.0 15190 IPEIKQTL 8 131 471.2859646548276 0 471.2865173220634 PEAK CID FTMS 0 0 0 6732 93400.6640625 1.0 0 0.0 8 Unmodified _IPEIKQTL_ ENSG00000155959|ENST00000286428|VBP1;nc|ENSG00000155959|P61758-2|VBP1 29.081581746732265 0.2463278183412906 1 M{I|L}S 3 7 13.302 0.0 0.0 1.4143 0.0 0.0 470.34196607547705 136.04087244205314 606.3828385175302 0.0 0.0 0.0 0.0 0 0.5 0.0 0.25 0.0 M{I|L}S 1.4143 - 50 + 1 2.166 86347.4 1.0 3284 3454 6732 DOHH2_400M_050219_1,6740 DOHH2_400M_050219_1,6740,IPEIKQTL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6741 37.367 51.0 1010700.0 25 0 130080.0 + 25890 NLIQKSESF 9 78 533.2827075291555 1064.5508621251108 2 533.2642089724541 MULTI CID FTMS 0 0 0 6732 188590.453125 0.1990588983851703 -1 0.1167449951171875 9 Unmodified _NLIQKSESF_ ENSG00000117724|ENST00000366955|CENPF 34.40172386719151 0.1061884637610825 1 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q 4 5 49.693 0.0 0.0 4.668 0.0 0.0 0.0 593.2567187685623 593.2567187685623 31.73393743112328 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.4247425010840047 + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q 4.668 + + 86 + 1 2.166 43054.4 1.0 3285 3454 6732 DOHH2_400M_050219_1,6741 DOHH2_400M_050219_1,6741,NLIQKSESF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6742 37.376 489.0 303510.0 25 0 34587.0 + 3737 DAFSRNNVL 9 164 518.2640479815767 1034.513543029953 2 518.2639037966728 MULTI CID FTMS 0 0 0 6732 117931.8515625 0.9800249965087858 -1 0.1167449951171875 10 Unmodified _DAFSRNNVL_ ENSG00000243156|ENST00000441493|MICAL3;nc|ENSG00000243156|Q7RTP6-2|MICAL3;nc|ENSG00000243156|Q7RTP6-3|MICAL3;nc|ENSG00000243156|Q7RTP6-4|MICAL3;nc|ENSG00000243156|Q7RTP6-5|MICAL3 31.26834338654808 0.1333407332142048 1 {[DA]|[EG]}{[RE]|[WV]}{M(Oxidation (M))|F}WV{I|L} 8 4 + 28.885 0.0 0.0 2.7922 2.7922 78.583 0.0 0.0 0.0 5.373122274383412 13.440006460307067 5.373122274383412 9.262137858390812 0 0.7485619177777272 1.3010299956639813 0.0 0.3494850021680094 {[DA]|[EG]}{[RE]|[WV]}{M(Oxidation (M))|F}WV{I|L};{[DA]|[EG]}{[RE]|[WV]}{M(Oxidation (M))|F}{[DA]|[EG]}V{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}[PS]{[WT]|[RM]}V{I|L};{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}{M(Oxidation (M))|F}NNV{I|L};{[MG]|[TS]}[WP]{M(Oxidation (M))|F}WV{I|L};{[SA]|[TG]}[RD]{M(Oxidation (M))|F}NNV{I|L};{[CP]|[EA]}[RD]{M(Oxidation (M))|F}WV{I|L};{[TV]|[{I|L}S]}[WM]TWV{I|L};{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}{M(Oxidation (M))|F}NGGV{I|L};{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}{M(Oxidation (M))|F}GGNV{I|L} 2.7922;1.8969;1.783;1.5529;1.0169;0.96579;0.83298;0.82249;0.66276;0.66276 -;-;-;-;-;-;-;-;-;- 471 1 2.166 116245.7 1.0 3286 3454 6732 DOHH2_400M_050219_1,6742 DOHH2_400M_050219_1,6742,DAFSRNNVL False True DAFSRNNVL 37.375707 518.263903796673 717793.8125 6732.0 nc|ENSG00000243156|Q7RTP6-4|MICAL3;;nc|ENSG00000243156|Q7RTP6-3|MICAL3;;nc|ENSG00000243156|Q7RTP6-5|MICAL3;;nc|ENSG00000243156|Q7RTP6-2|MICAL3;;ENSG00000243156|ENST00000441493|MICAL3 5.060317039489746 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6743 37.39 800.0 41722.0 25 0 12037.0 -1 0 20 1186.4625351836107 3556.365776151032 3 1187.129931628704 MULTI CID FTMS 0 0 0 6732 119892.890625 1.0 0 0.0 11 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.166 36495.5 0.4199999868869781 3287 3454 6732 DOHH2_400M_050219_1,6743 DOHH2_400M_050219_1,6743, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6745 37.394 67.0 976780.0 25 0 69329.0 + 22609 LPYIKQEV 8 95 495.2872326325492 988.5599123318984 2 495.2870971560478 MULTI CID FTMS 0 0 0 6744 640999.5625 0.5103035512096133 1 -0.0856742858886718 1 Unmodified _LPYIKQEV_ ENSG00000047315|ENST00000314595|POLR2B 36.12702656103203 0.299085846329477 1 {I|L}PY{I|L}K 5 3 55.42 0.0 0.0 5.6061 0.0 0.0 0.0 371.1570223443969 371.1570223443969 34.92484374491461 0.0 0.0 0.0 0 0.8252574989159953 1.5228787452803376 0.0 0.0 + {I|L}PY{I|L}K 5.6061 + + 448 + 1 2.166 56712.6 1.0 3288 3455 6744 DOHH2_400M_050219_1,6745 DOHH2_400M_050219_1,6745,LPYIKQEV False True LPYIKQEV 37.394421 495.287097156048 12418588.0 6744.0 ENSG00000047315|ENST00000314595|POLR2B 3.584146499633789 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6746 37.397 97.0 445470.0 25 0 30412.0 + 11292 GEVEGHPVW 9 92 505.24064588176674 1008.4667388303336 2 505.2408935427666 MULTI CID FTMS 0 0 0 6744 256824.859375 0.1494776518565657 2 -0.1823234558105468 2 Unmodified _GEVEGHPVW_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 28.486842064014134 0.1687311288560894 1 {[DA]|[EG]}VE{[HG]|PP}[VP]W 9 0 + 43.407 0.0 0.0 4.3042 4.3042 84.599 0.0 0.0 0.0 28.802652907819635 3.717327760564686 3.717327760564686 15.136284439750437 0 0.805462187404089 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}VE{[HG]|PP}[VP]W;{[DA]|[EG]}V{M(Oxidation (M))|F}GP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};WV[YQ]{NN|[MP]|[D{I|L}]|[EV]}W;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}VP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};{[DA]|[EG]}[R{M(Oxidation (M))|F}]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F} 4.3042;2.8033;2.3839;1.9104;1.5665 +;-;-;-;- + 180 + 1 2.166 38822.8 1.0 3289 3455 6744 DOHH2_400M_050219_1,6746 DOHH2_400M_050219_1,6746,GEVEGHPVW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6747 37.398 50.0 1244300.0 25 0 166770.0 + 25891 NLIQKSESF 9 87 533.2827075291555 1064.5508621251108 2 533.2830078005791 MULTI CID FTMS 0 0 0 6744 947410.3125 1.0 0 0.0 3 Unmodified _NLIQKSESF_ ENSG00000117724|ENST00000366955|CENPF 41.8396318013385 0.0653578398400075 1 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q 4 5 49.693 0.0 0.0 4.668 0.0 0.0 0.0 593.2584108462328 593.2584108462328 22.01081778473849 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.4247425010840047 + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q 4.668 + + 255 + 1 2.166 51979.7 1.0 3290 3455 6744 DOHH2_400M_050219_1,6747 DOHH2_400M_050219_1,6747,NLIQKSESF True True NLIQKSESF 37.397837 533.283007800579 10641564.0 6744.0 ENSG00000117724|ENST00000366955|CENPF 5.769967397054036 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6748 37.399 69.0 578420.0 25 0 83534.0 -1 TMIDYWQMIFF 11 69 504.2304161900159 1509.6694191702477 3 504.2302734255791 MULTI CID FTMS 0 0 0 6744 462363.96875 1.0 0 0.0 4 Oxidation (M) _TMIDYWQM(Oxidation (M))IFF_ ENSG00000118322|ENST00000327245|ATP10B 1.3296431237094175 0.8688745925763601 1 {[DA]|[EG]}VH 4 -1 17.792 0.0 0.0 1.1785 0.0 0.0 0.0 1084.4561067525322 1084.4561067525322 2.307131330965717 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {[DA]|[EG]}VH 1.1785 - 100 1 2.166 39082.4 1.0 3291 3455 6744 DOHH2_400M_050219_1,6748 DOHH2_400M_050219_1,6748,TMIDYWQMIFF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6749 37.402 147.0 338730.0 25 0 63355.0 + 40283 VGVAQRRG 8 84 421.7516385099368 841.4887240866735 2 421.7511474490166 MULTI CID FTMS 0 0 0 6744 385066.34375 0.7497653583994148 -2 0.2149696350097656 5 Unmodified _VGVAQRRG_ REV__ENSG00000282936|ENST00000634965|unknown 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.166 44771.2 1.0 3292 3455 6744 DOHH2_400M_050219_1,6749 DOHH2_400M_050219_1,6749,VGVAQRRG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6750 37.406 173.0 255520.0 25 0 42127.0 -1 EVRYTVRCIY 10 64 679.8462444028198 1357.6779358724395 2 679.8461791872978 MULTI CID FTMS 0 0 0 6744 363988.3125 0.3849035886009891 2 -0.1823234558105468 6 Carbamidomethyl (C) _EVRYTVRC(Carbamidomethyl (C))IY_ ENSG00000125386|ENST00000637812|FAM193A 13.90604991867851 0.6142120002215601 1 {I|L}Y 2 -1 27.959 0.0 0.0 2.0593 0.0 0.0 1063.5194713722426 0.0 1063.5194713722426 0.0 20.51152522447381 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}Y 2.0593 + + 13 + 1 2.166 45194.1 1.0 3293 3455 6744 DOHH2_400M_050219_1,6750 DOHH2_400M_050219_1,6750,EVRYTVRCIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6751 37.409 138.0 768640.0 25 0 104060.0 + 13000 HAMRRLINL 9 88 375.222244301368 1122.644903504304 3 375.2218505740166 MULTI CID FTMS 0 0 0 6744 297816.9375 0.7357546738640364 -1 0.0982246398925781 7 Unmodified _HAMRRLINL_ ENSG00000163683|ENST00000295958|SMIM14 21.53697664764585 0.2571576504437394 1 {I|L}H 2 8 17.959 0.0 0.0 1.5997 0.0 0.0 0.0 869.479452858703 869.479452858703 4.859856381998782 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}H 1.5997 - 23 + 1 2.166 87549.5 1.0 3294 3455 6744 DOHH2_400M_050219_1,6751 DOHH2_400M_050219_1,6751,HAMRRLINL False True HAMRRLINL 37.408592 375.221850574017 2462094.25 6744.0 ENSG00000163683|ENST00000295958|SMIM14 2.60986598332723 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6752 37.414 290.0 292720.0 25 0 21015.0 + -1 VEQGIDAKW 9 114 523.2709651084699 522.2636886418699 1 523.2699462771416 MULTI CID FTMS 0 0 0 6744 237634.40625 1.0 0 0.0 8 ENSG00000179151|ENST00000315127|EDC3 1 {[QV]|[N{I|L}]|[RA]|[KV]}EG 4 -1 20.671 0.0 0.0 3.9579 0.0 0.0 0.0 106.04936914407612 106.04936914407612 1.4623456228146274 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3252574989159953 0.5189301784845296 {[QV]|[N{I|L}]|[RA]|[KV]}EG 3.9579 - 160 1 2.166 72156.8 1.0 3295 3455 6744 DOHH2_400M_050219_1,6752 DOHH2_400M_050219_1,6752, False False VEQGIDAKW 37.413931 523.269946277142 1782011.875 6744.0 ENSG00000179151|ENST00000315127|EDC3 4.9288889567057295 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6753 37.423 493.0 197970.0 25 0 13973.0 + 18067 KTDSDSDLQLY 11 102 642.8013752597541 1283.588197586308 2 642.8007690310478 MULTI CID FTMS 0 0 0 6744 122572.84375 0.4583157720818107 -1 0.0982246398925781 9 Unmodified _KTDSDSDLQLY_ ENSG00000116337|ENST00000528667|AMPD2;ENST00000525415.1_1_1:110168821-110169689:+|nuORF;ENST00000526301.5_1_1:110162158-110172443:+|nuORF;nc|ENSG00000116337|Q01433-2|AMPD2;nc|ENSG00000116337|Q01433-4|AMPD2;nc|ENSG00000116337|Q01433-5|AMPD2 63.22749603027936 0.0560465731344335 1 {[ET]|[MV]}[C(Carbamidomethyl (C))R]SD{I|L}Q{I|L}Y 10 4 + 71.278 0.0 0.0 5.553 5.553 77.808 0.0 0.0 0.0 1.6722687557546578 51.594374518258334 1.6722687557546578 1.7609125905568137 0 1.0 0.0 1.9049471895720984 0.7614393726401688 {[ET]|[MV]}[C(Carbamidomethyl (C))R]SD{I|L}Q{I|L}Y;{[WT]|[RM]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SD{I|L}Q{I|L}Y;{[ET]|[MV]}[SG][TA]SD{I|L}Q{I|L}Y;{[WT]|[RM]}S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D{I|L}Q{I|L}Y;{[ET]|[MV]}[C(Carbamidomethyl (C))R]SD{I|L}[AG]{I|L}Y;{[WT]|[RM]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SD{I|L}[AG]{I|L}Y;{[ET]|[MV]}[SG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D{I|L}Q{I|L}Y;{[WT]|[RM]}S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D{I|L}[AG]{I|L}Y;[AG]{I|L}D[DG]{[DS]|[MA]|[CV]|TT}{I|L}E[RH];[AG]{I|L}DS[QA][NS]E[RH] 5.553;5.4159;5.1196;4.8847;4.8391;4.7019;4.3079;4.1707;0.85015;0.41055 -;-;-;-;-;-;-;-;-;- 465 1 2.166 84186.2 1.0 3296 3455 6744 DOHH2_400M_050219_1,6753 DOHH2_400M_050219_1,6753,KTDSDSDLQLY True True KTDSDSDLQLY 37.422669 642.800769031048 1754072.75 6744.0 ENSG00000116337|ENST00000528667|AMPD2;;ENST00000525415.1_1_1:110168821-110169689:+|nuORF;;nc|ENSG00000116337|Q01433-5|AMPD2;;nc|ENSG00000116337|Q01433-4|AMPD2;;nc|ENSG00000116337|Q01433-2|AMPD2;;ENST00000526301.5_1_1:110162158-110172443:+|nuORF 8.224239826202393 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6754 37.428 280.0 374750.0 25 0 21027.0 + 5430 DLMSKKIHL 9 158 362.2107721159763 1083.610486948129 3 362.2096740603447 MULTI CID FTMS 0 0 0 6744 133560.5 1.0 0 0.0 10 Unmodified _DLMSKKIHL_ ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1;nc|ENSG00000133706|Q9P2J5-3|LARS1 34.93206674587334 0.1032771302489716 1 {NN|[MP]|[D{I|L}]|[EV]}MSKK{I|L}H{I|L} 9 0 + 52.801 0.0 0.0 4.8727 4.8727 81.0 0.0 0.0 0.0 27.147642715192497 6.9019608002851385 6.9019608002851385 6.9019608002851385 0 0.2134679910804404 2.0 0.4247425010840047 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}MSKK{I|L}H{I|L};{NN|[MP]|[D{I|L}]|[EV]}MSKK{I|L}{I|L}H;[{M(Oxidation (M))|F}V]DRGK{I|L}H{I|L};[{M(Oxidation (M))|F}V]{I|L}{[SA]|[TG]}GK{I|L}H{I|L};[{M(Oxidation (M))|F}V]DRGK{I|L}{I|L}H;[{M(Oxidation (M))|F}V]{I|L}{[QS]|[NT]}K{I|L}H{I|L};[{M(Oxidation (M))|F}V]{[CP]|[EA]}KK{I|L}H{I|L};[{M(Oxidation (M))|F}V]{I|L}{[SA]|[TG]}GK{I|L}{I|L}H;[{M(Oxidation (M))|F}V]{I|L}{[QS]|[NT]}K{I|L}{I|L}H;[{M(Oxidation (M))|F}V]{[CP]|[EA]}KK{I|L}{I|L}H 4.8727;4.2357;1.6788;1.5883;1.0419;0.98546;0.98546;0.95133;0.34852;0.34852 +;-;-;-;-;-;-;-;-;- + 168 + 1 2.166 88982.1 1.0 3297 3455 6744 DOHH2_400M_050219_1,6754 DOHH2_400M_050219_1,6754,DLMSKKIHL True True DLMSKKIHL 37.427819 362.209674060345 672255.3125 6744.0 nc|ENSG00000133706|Q9P2J5-2|LARS1;;ENSG00000133706|ENST00000394434|LARS1;;nc|ENSG00000133706|Q9P2J5-3|LARS1 4.617995738983154 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6755 37.436 454.0 165060.0 25 0 9883.1 19293 LEKSFAIASL 10 126 539.8106217989836 1077.606690664767 2 539.8110229372978 MULTI CID FTMS 0 0 0 6744 116748.9921875 0.4625997388691085 1 -0.0856742858886718 11 Unmodified _LEKSFAIASL_ ENSG00000148843|ENST00000369797|PDCD11 18.1463463914782 0.5430639438673815 1 {[QN]|[E{I|L}]|[KN]}K[YK][TP]S{I|L} 9 5 + 26.193 0.0 0.0 2.4307 2.4307 80.061 0.0 0.0 0.0 8.657424843733637 1.271818570135327 1.271818570135327 16.352744048435923 0 0.5 1.3979400086720375 0.1861818737241735 0.0 {[QN]|[E{I|L}]|[KN]}K[YK][TP]S{I|L};{[QN]|[E{I|L}]|[KN]}K[YK][{I|L}T][PS];{[QN]|[E{I|L}]|[KN]}K[PA][RP]N[PG] 2.4307;0.91319;0.84472 -;-;- 356 + 1 2.166 63165.4 1.0 3298 3455 6744 DOHH2_400M_050219_1,6755 DOHH2_400M_050219_1,6755,LEKSFAIASL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6756 37.447 665.0 302410.0 25 0 31471.0 + 9494 FLDKSGLQGY 10 171 564.2904472825355 1126.566341631871 2 564.2916137576103 MULTI CID FTMS 0 0 0 6744 120623.734375 0.2405035911425959 -2 0.2149696350097656 12 Unmodified _FLDKSGLQGY_ ENSG00000073921|ENST00000393346|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-5|PICALM 111.30893174071366 0.0018429578110034 1 {M(Oxidation (M))|F}{I|L}DK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QGY 9 3 + 77.559 0.0 0.0 6.8846 6.8846 92.621 0.0 0.0 0.0 30.964015683995783 16.478174818886373 16.478174818886373 12.703037561203844 0 2.341129063296272 0.0 0.3252574989159953 1.4731975075880328 {M(Oxidation (M))|F}{I|L}DK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QGY;{M(Oxidation (M))|F}{I|L}DK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]GY;[YG]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KD{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DKSG{I|L}QGY;{[QD]|[EN]|[WG]|[KD]|[RS]}SG{I|L}Q{I|L}{M(Oxidation (M))|F}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}SG{I|L}{M(Oxidation (M))|F}{I|L}QGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KDQ{I|L}{M(Oxidation (M))|F}GY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KD{M(Oxidation (M))|F}{I|L}QGY;[YG][AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KD{I|L}E;{[QD]|[EN]|[WG]|[KD]|[RS]}SG{I|L}Q[HT]{I|L}E 6.8846;5.757;5.2994;4.9687;4.5835;4.5472;4.5225;4.4861;4.4821;4.386 -;-;-;+;-;-;-;-;-;- + 6853 + 1 2.166 148926.6 1.0 3299 3455 6744 DOHH2_400M_050219_1,6756 DOHH2_400M_050219_1,6756,FLDKSGLQGY True True FLDKSGLQGY 37.447469 564.29161375761 2940143.5 6744.0 nc|ENSG00000073921|Q13492-5|PICALM;;ENSG00000073921|ENST00000393346|PICALM;;nc|ENSG00000073921|Q13492-3|PICALM;;nc|ENSG00000073921|Q13492-4|PICALM;;nc|ENSG00000073921|Q13492-2|PICALM 7.683942953745524 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6757 37.461 800.0 166360.0 25 0 13084.0 + 7776 ELGIRHVL 8 158 468.7847819352606 935.5550109373212 2 468.7846862673759 MULTI CID FTMS 0 0 0 6744 94439.828125 0.8048990295439535 -2 0.2149696350097656 13 Unmodified _ELGIRHVL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 96.28474662873226 0.07713372045102 1 E{I|L}G{I|L}RHV{I|L} 8 0 + 78.815 0.0 0.0 8.4244 8.4244 87.823 0.0 0.0 0.0 66.34102222725673 12.5190243216651 12.5190243216651 4.247425010840047 0 2.004432191740108 2.0 0.0 0.0 + + E{I|L}G{I|L}RHV{I|L};E{I|L}{I|L}GRHV{I|L};{[QN]|[E{I|L}]|[KN]}G{I|L}RHV{I|L};E{I|L}G{I|L}[VG]HV{I|L};E{I|L}{I|L}G[VG]HV{I|L};E{I|L}[KP]THV{I|L};E{I|L}G{I|L}RH{I|L}V;E{I|L}{I|L}GRH{I|L}V;E{I|L}G{I|L}[VG]H{I|L}V;{[DA]|[EG]}{I|L}{I|L}RHV{I|L} 8.4244;7.9704;7.8546;7.4344;6.9804;6.941;6.87;6.416;5.88;5.819 +;-;+;-;-;-;-;-;-;- + 442 + 1 2.166 105017.5 0.449999988079071 3300 3455 6744 DOHH2_400M_050219_1,6757 DOHH2_400M_050219_1,6757,ELGIRHVL True True ELGIRHVL 37.461285 468.784686267376 1060178.0 6744.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 4.886993726094564 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6758 37.475 800.0 145980.0 25 0 6911.3 1171 AHNLTIEM 8 164 464.7316379614084 927.4487229896168 2 464.7314025759697 MULTI CID FTMS 0 0 0 6744 131026.5625 0.0164461307934107 4 -0.4314422607421875 14 Unmodified _AHNLTIEM_ ENSG00000137831|ENST00000322954|UACA;nc|ENSG00000137831|Q9BZF9-2|UACA 18.13498045792455 0.6430038125133779 1 {[{M(Oxidation (M))|F}C]|[YS]}{I|L}[WK]TM 7 6 + 30.378 0.0 0.0 3.2755 3.2755 77.59 0.0 0.0 0.0 3.027194418743804 4.4362744998217885 3.027194418743804 9.16361742548089 0 0.0 0.0 0.1382104921644452 0.0 {[{M(Oxidation (M))|F}C]|[YS]}{I|L}[WK]TM;{[YD]|[{M(Oxidation (M))|F}M]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[K{I|L}]M;{[{M(Oxidation (M))|F}C]|[YS]}[WK]{I|L}TM;[HA]DQ{I|L}{I|L}TM;[HA]DGA{I|L}{I|L}TM;[AG][HD]A{I|L}{I|L}TM;[HA]DG{I|L}A{I|L}TM;{[{M(Oxidation (M))|F}C]|[YS]}{[WT]|[RM]}[K{I|L}]M;[AG][HD]{I|L}A{I|L}TM;{[YD]|[{M(Oxidation (M))|F}M]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[KP]{M(Oxidation (M))|F} 3.2755;2.2874;2.0026;1.9801;1.7048;1.5285;1.0964;0.99467;0.92005;0.79925 -;-;-;-;-;-;-;-;-;- 146 + 1 2.166 88621.0 0.5400000214576721 3301 3455 6744 DOHH2_400M_050219_1,6758 DOHH2_400M_050219_1,6758,AHNLTIEM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6760 37.48 10.0 5618300.0 25 0 490940.0 + 38183 TPRHIIVRF 9 79 380.2332108836047 1137.6778032510142 3 380.2330505251884 MULTI CID FTMS 0 0 0 6759 4510433.5 0.488123875447954 1 -0.096649169921875 1 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 36.39500950444726 0.095246261068787 1 TPRH{I|L}{I|L}{M(Oxidation (M))|F}[RV] 9 2 + 69.857 0.0 0.0 6.1403 6.1403 81.412 0.0 0.0 0.0 16.478174818886373 2.992953198672268 2.992953198672268 2.992953198672268 0 1.274227503252014 0.0 0.0 0.25 TPRH{I|L}{I|L}{M(Oxidation (M))|F}[RV];TPRH{I|L}{I|L}VR{M(Oxidation (M))|F};TPRH{I|L}{M(Oxidation (M))|F}{I|L}[RV];TPRH{M(Oxidation (M))|F}{I|L}{I|L}[RV] 6.1403;5.8772;5.6559;4.5986 -;+;-;- + 167 + 1 2.173 51888.4 1.0 3302 3456 6759 DOHH2_400M_050219_1,6760 DOHH2_400M_050219_1,6760,TPRHIIVRF True True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6761 37.481 51.0 1492300.0 25 0 262170.0 + 38186 TPRHIIVRF 9 65 569.8458678855573 1137.6771828379144 2 569.8459350466728 MULTI CID FTMS 0 0 0 6759 1020498.3125 0.4535549063455347 1 -0.096649169921875 2 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 32.037481411007896 0.1235546156350648 1 T[RP]H{I|L}{I|L}V{M(Oxidation (M))|F}R 9 2 + 28.566 0.0 0.0 2.5109 2.5109 81.642 0.0 0.0 0.0 12.55326554173664 15.63441027934751 12.55326554173664 28.56623529335473 0 0.3935078169319297 0.0 0.0 0.5 T[RP]H{I|L}{I|L}V{M(Oxidation (M))|F}R 2.5109 - 45 + 1 2.173 63577.3 1.0 3303 3456 6759 DOHH2_400M_050219_1,6761 DOHH2_400M_050219_1,6761,TPRHIIVRF True True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6762 37.483 57.0 1001700.0 25 0 224390.0 + 10929 GAKRHSGL 8 74 413.2388644783535 824.463176023507 2 413.2382079958916 MULTI CID FTMS 0 0 0 6759 1140958.0 0.8584692500946157 -1 0.0856742858886718 3 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 2.302733041254933 0.8103549651115762 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.173 51577.6 1.0 3304 3456 6759 DOHH2_400M_050219_1,6762 DOHH2_400M_050219_1,6762,GAKRHSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6763 37.486 149.0 694250.0 25 0 54151.0 + 11767 GLKVREYEL 9 97 553.8144426539409 1105.6143323746817 2 553.8141967654228 MULTI CID FTMS 0 0 0 6759 389683.34375 0.0683454269307575 -2 0.18389892578125 4 Unmodified _GLKVREYEL_ ENSG00000142676|ENST00000643754|RPL11;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;nc|ENSG00000142676|P62913-2|RPL11 55.50274090549119 0.0285720310785888 1 {I|L}GKV 4 7 56.216 0.0 0.0 5.0846 0.0 0.0 0.0 705.3228879414244 705.3228879414244 37.23705952196511 0.0 0.0 0.0 0 0.8252574989159953 1.6989700043360187 0.0 0.3807196863200844 {I|L}GKV 5.0846 - 88 + 1 2.173 84385.8 1.0 3305 3456 6759 DOHH2_400M_050219_1,6763 DOHH2_400M_050219_1,6763,GLKVREYEL True True GLKVREYEL 37.485635 553.814196765423 106026312.0 6759.0 ENSG00000142676|ENST00000643754|RPL11;;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;;nc|ENSG00000142676|P62913-2|RPL11 4.404568195343018 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6764 37.489 146.0 439630.0 25 0 79581.0 + 8342 ERRGGPVV 8 93 435.2515280440389 868.4885031548779 2 435.2510558962822 MULTI CID FTMS 0 0 0 6759 361551.21875 0.2538553648925989 -13 1.4192543029785156 5 Unmodified _ERRGGPVV_ REV__ENST00000446001.1_1_6:13486575-13486937:+|nuORF 0.7936320650641473 0.8195151834710337 1 {I|L} 1 -1 8.4518 0.0 0.0 0.97317 0.0 0.0 737.3939424632748 0.0 737.3939424632748 0.0 4.472449076150129 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.97317 - 5 + 1 2.173 54489.4 1.0 3306 3456 6759 DOHH2_400M_050219_1,6764 DOHH2_400M_050219_1,6764,ERRGGPVV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6765 37.492 198.0 360250.0 25 0 51097.0 + 514 AEHFLEQQM 9 102 566.7582753804089 1131.5019978276175 2 566.7591430544853 MULTI CID FTMS 0 0 0 6759 283454.875 0.1999600897953151 2 -0.2248649597167968 6 Unmodified _AEHFLEQQM_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 30.63653989081413 0.1413794767160703 1 [AG]M[QP]{I|L}EQQM 10 4 + 43.107 0.0 0.0 3.8098 3.8098 69.857 0.0 0.0 0.0 0.5799194697768684 8.652340397648857 0.5799194697768684 0.4139268515822536 0 0.718765315847925 1.5228787452803376 0.4247425010840047 0.0 [AG]M[QP]{I|L}EQQM;[AG]M[PA]G{I|L}EQQM;{[YC]|[HE]}A{M(Oxidation (M))|F}{I|L}EQQM;[AG]M[QP]{I|L}E[AG]QM;[AG]M[PA]G{I|L}E[AG]QM;{[YC]|[HE]}A{M(Oxidation (M))|F}{I|L}E[AG]QM;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP]{I|L}EQQM;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PA]G{I|L}EQQM;[AG]M[QP]{I|L}G{[CP]|[EA]}QM;[AG]M[PA]G{I|L}G{[CP]|[EA]}QM 3.8098;3.7732;3.7585;2.9998;2.9664;2.9447;2.8995;2.8591;2.3584;2.325 -;-;-;-;-;-;-;-;-;- 375 1 2.173 58053.7 1.0 3307 3456 6759 DOHH2_400M_050219_1,6765 DOHH2_400M_050219_1,6765,AEHFLEQQM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6766 37.497 226.0 398950.0 25 0 66080.0 + 35295 SSPRQARAQF 10 120 383.20315459821205 0 383.2010070681572 PEAK CID FTMS 0 0 0 6759 187161.96875 0.6918938145843617 -1 0.0856742858886718 7 Unmodified _SSPRQARAQF_ REV__ENST00000553454.1_1_14:24422954-24423188:-|nuORF;REV__ENST00000554036.1_1_14:24422516-24423059:-|nuORF;REV__ENST00000556379.1_1_14:24410354-24423188:-|nuORF 9.38312468134398 0.3794934366477728 1 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.71751 0.0 0.0 534.2862245022851 80.01487909488515 614.3011035971703 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.71751 + + 34 + 1 2.173 76088.7 1.0 3308 3456 6759 DOHH2_400M_050219_1,6766 DOHH2_400M_050219_1,6766,SSPRQARAQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6767 37.502 293.0 225440.0 25 0 46824.0 + + 19658 LGNGRLEAL 9 82 471.7723916829535 0 471.7723266482353 PEAK CID FTMS 0 0 0 6759 157061.09375 1.0 0 0.0 8 Unmodified _LGHYVGLAL_ ENST00000465253.1_1_Y:22737757-22750047:+|nuORF;ENSG00000198692|ENST00000361365|EIF1AY 45.7499826716795 0.043292906891918 1 GNWR{I|L}A 6 -1 22.396 0.0 0.0 2.3787 0.0 0.0 113.08304215870255 128.07195459537346 241.154996754076 0.0 0.0 0.0 0.0 0 1.548455006504028 0.0 0.0 0.0 GNWR{I|L}A 2.3787 - 54 + 1 2.173 57201.7 1.0 3309 3456 6759 DOHH2_400M_050219_1,6767 DOHH2_400M_050219_1,6767,LGHYVGLAL False False LGNGRLEAL 37.501964 471.772326648235 1066795.25 6759.0 ENST00000465253.1_1_Y:22737757-22750047:+|nuORF;;ENSG00000198692|ENST00000361365|EIF1AY 5.0669379234313965 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6768 37.516 800.0 152710.0 25 0 8902.8 + + 43726 ASENTNHAVYNLY 13 132 748.3441243862965 1494.6736958393928 2 748.3445922732353 MULTI CID FTMS 0 0 0 6759 147963.109375 0.7330319092361981 -1 0.0856742858886718 9 Unmodified _YDFRFTQNELY_ nc|ENSG00000036672|O75604-3|USP2;nc|ENSG00000036672|O75604-2|USP2;ENSG00000036672|ENST00000260187|USP2;nc|ENSG00000036672|O75604-4|USP2 20.41453444215458 0.6105011870913812 1 {[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}VESAYN{I|L}Y 12 -1 + 99.559 0.0 0.0 6.6609 6.6609 81.082 0.0 0.0 0.0 8.081845230116201 16.611814434466183 8.081845230116201 1.5740263701204071 0 0.8494850021680094 1.6989700043360187 0.6109243748081782 2.7856668758921828 {[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}VESAYN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}AVYN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}YM[MT]AVYN{I|L}Y;[YN]{I|L}{M(Oxidation (M))|F}VESAYN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}VESAYGG{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}VAYN{I|L}Y;[YN]{I|L}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}AVYN{I|L}Y;[TP]{M(Oxidation (M))|F}YQESAYN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}AVYGG{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}YM[MT]VAYN{I|L}Y 6.6609;6.5556;6.4519;6.1202;6.0522;6.0188;6.0149;5.9861;5.9469;5.9151 -;-;-;-;-;-;-;-;-;- 16187 1 2.173 90938.9 0.6600000262260437 3310 3456 6759 DOHH2_400M_050219_1,6768 DOHH2_400M_050219_1,6768,YDFRFTQNELY False False ASENTNHAVYNLY 37.515829 748.344592273235 1322359.875 6759.0 nc|ENSG00000036672|O75604-3|USP2;;nc|ENSG00000036672|O75604-2|USP2;;ENSG00000036672|ENST00000260187|USP2;;nc|ENSG00000036672|O75604-4|USP2 6.617630958557129 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6769 37.522 367.0 254270.0 25 0 11866.0 + 29483 QLKEHFAQF 9 135 574.29969326367 1146.5848335941398 2 574.2991821169853 MULTI CID FTMS 0 0 0 6759 154047.171875 0.7695901251606074 -1 0.0856742858886718 10 Unmodified _QLKEHFAQF_ ENSG00000119705|ENST00000557342|SLIRP;ENST00000554074.1_1_14:78174487-78178182:+|nuORF;nc|ENSG00000119705|Q9GZT3-2|SLIRP 30.63653989081413 0.1413794767160703 1 [Q{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))R]KW 8 5 + 26.282 0.0 0.0 2.2922 2.2922 67.732 0.0 0.0 0.0 9.247717304901837 6.677353201839434 6.677353201839434 1.3476596023511398 0 0.5189301784845296 1.5228787452803376 0.0 0.0 [Q{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))R]KW;[Q{I|L}]{[WT]|[RM]}{M(Oxidation (M))|F}[VP]AW;[Q{I|L}][C(Carbamidomethyl (C))K]{[RE]|[WV]}KW;[Q{I|L}]{[QG]|[NA]}{M(Oxidation (M))|F}[YV][RH];[Q{I|L}]{[ET]|[MV]}[RH]A[RH];{[CT]|[{M(Oxidation (M))|F}G]}K{[RE]|[WV]}{M(Oxidation (M))|F}A[RH];[Q{I|L}][MT][YK]A[RH];[AG]{M(Oxidation (M))|F}[VP][RH]A[RH];{[CT]|[{M(Oxidation (M))|F}G]}K[Q{I|L}]{[{M(Oxidation (M))|F}D]|MM}[RH];[VP]{[ET]|[MV]}{M(Oxidation (M))|F}[YV][RH] 2.2922;2.1746;1.985;1.4095;1.2548;1.1435;0.87166;0.83304;0.7999;0.64481 -;-;-;-;-;-;-;-;-;- 1165 + 1 2.173 72212.0 1.0 3311 3456 6759 DOHH2_400M_050219_1,6769 DOHH2_400M_050219_1,6769,QLKEHFAQF False True QLKEHFAQF 37.522451 574.299182116985 2055116.375 6759.0 ENSG00000119705|ENST00000557342|SLIRP;;nc|ENSG00000119705|Q9GZT3-2|SLIRP;;ENST00000554074.1_1_14:78174487-78178182:+|nuORF 5.784316857655843 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6770 37.529 384.0 226410.0 25 0 13239.0 7181 EEPVLDPHLA 10 135 560.289665267661 1118.564777602122 2 560.2908813357353 MULTI CID FTMS 0 0 0 6759 114804.8515625 0.8501216548671839 1 -0.096649169921875 11 Unmodified _EEPVLDPHLA_ ENSG00000058056|ENST00000263966|USP13;nc|ENSG00000058056|Q92995-2|USP13 11.640296217721598 0.652229146672156 1 [MD]K[KG][YG]HA{I|L} 10 9 + 28.662 0.0 0.0 2.5624 2.5624 75.811 0.0 0.0 0.0 4.259687322722812 1.2147820449879276 1.2147820449879276 9.030899869919438 0 0.0 1.6989700043360187 0.0 0.0 [MD]K[KG][YG]HA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}A[YG]HA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}[YQ]HA{I|L};[MD]KEE[RK]A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[KG][YG]HA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PHA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[{M(Oxidation (M))|F}T]RHA{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[NV]|[RG]}A[YG]HA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}RHA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[W{I|L}][YG]HA{I|L} 2.5624;1.755;1.1711;1.1253;0.77439;0.74451;0.63281;0.50527;0.20627;0.19042 -;-;-;-;-;-;-;-;-;- 306 + 1 2.173 67973.3 1.0 3312 3456 6759 DOHH2_400M_050219_1,6770 DOHH2_400M_050219_1,6770,EEPVLDPHLA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6771 37.543 787.0 271610.0 25 0 31924.0 + 26572 NVLPRTVSV 9 169 492.7963710020289 983.578189070858 2 492.7959472537041 MULTI CID FTMS 0 0 0 6759 82830.046875 0.3504857563010931 -1 0.0856742858886718 12 Unmodified _NVLPRTVSV_ ENSG00000129810|ENST00000412997|SGO1;nc|ENSG00000129810|Q5FBB7|SGO1 53.40400417844725 0.0329064971918313 1 NV{I|L}V 4 5 57.423 0.0 0.0 5.8381 0.0 0.0 0.0 555.2891329400999 555.2891329400999 40.996075289514096 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 NV{I|L}V 5.8381 - 443 + 1 2.173 159539.7 1.0 3313 3456 6759 DOHH2_400M_050219_1,6771 DOHH2_400M_050219_1,6771,NVLPRTVSV True True NVLPRTVSV 37.542949 492.795947253704 1158160.875 6759.0 ENSG00000129810|ENST00000412997|SGO1;;nc|ENSG00000129810|Q5FBB7|SGO1 4.62135402361552 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6772 37.558 800.0 103270.0 25 0 6560.1 -1 0 99 728.021685949303 2181.043228448109 3 728.3550903201103 MULTI CID FTMS 0 0 0 6759 105097.8515625 1.0 0 0.0 13 1 GTMGAQS 7 -1 39.646 0.0 0.0 1.8177 0.0 0.0 992.5120725093152 553.2498262994749 1545.7618988087902 0.0 0.0 0.0 0.0 0 1.924742501084005 0.0 0.0 0.0 GTMGAQS 1.8177 - 1089 + 1 2.173 67175.7 0.5799999833106995 3314 3456 6759 DOHH2_400M_050219_1,6772 DOHH2_400M_050219_1,6772, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6773 37.572 800.0 55920.0 25 0 6227.2 -1 0 89 722.4545086071512 721.4472321405511 1 722.4523193240166 MULTI CID FTMS 0 0 0 6759 90056.5625 1.0 0 0.0 14 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QA 5 -1 12.932 0.0 0.0 1.7925 0.0 0.0 0.0 162.15826664666363 162.15826664666363 1.67276514903822 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QA 1.7925 - 36 1 2.173 50226.7 0.5899999737739563 3315 3456 6759 DOHH2_400M_050219_1,6773 DOHH2_400M_050219_1,6773, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6775 37.577 101.0 402510.0 25 0 58015.0 + -1 EEIHATGFNY 10 79 590.2646543066221 1178.514755680044 2 590.7668334841728 MULTI CID FTMS 0 0 0 6774 356321.53125 0.224760093112423 2 -0.2491188049316406 1 2 Oxidation (M) _FVSVM(Oxidation (M))RM(Oxidation (M))DY_ nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2|NPEPPSL1;nc|ENSG00000274487|A6NEC2-3|NPEPPSL1;ENSG00000141279|ENST00000322157|NPEPPS 12.531546534597751 0.4974689918368763 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}GTA{[NV]|[RG]}NY 10 -1 + 31.282 0.0 0.0 2.6544 2.6544 67.427 0.0 0.0 0.0 11.643200176607928 9.181212380090225 9.181212380090225 0.6819517757019185 0 0.0 0.0 0.9247425010840048 0.3494850021680094 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}GTA{[NV]|[RG]}NY;[TP]NEGTA{[NV]|[RG]}NY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}GE[KQ]NY;[TP]NEGE[KQ]NY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}GE[RV]DY;[TP]NEGE[RV]DY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}W[RV]DY;[TP]GGEGTA{[NV]|[RG]}NY;[TP]GGEGE[KQ]NY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}GTA{[NV]|[RG]}GGY 2.6544;2.5965;2.5049;2.4434;2.2495;2.1879;2.1047;1.8219;1.6657;1.5802 -;-;-;-;-;-;-;-;-;- 303 + 1 2.173 39523.0 1.0 3316 3457 6774 DOHH2_400M_050219_1,6775 DOHH2_400M_050219_1,6775,FVSVMRMDY False False EEIHATGFNY 37.576541 590.766833484173 10118059.0 6774.0 nc|ENSG00000141279|P55786-2|NPEPPS;;nc|ENSG00000274487|A6NEC2|NPEPPSL1;;nc|ENSG00000274487|A6NEC2-3|NPEPPSL1;;ENSG00000141279|ENST00000322157|NPEPPS 7.2217152913411455 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6776 37.59 797.0 147750.0 25 0 14402.0 + 29622 QMDPSSNFY 9 170 544.7211388515586 1087.4277247699172 2 544.7211791872978 MULTI CID FTMS 0 0 0 6774 93699.453125 0.1334483908123736 2 -0.2491188049316406 2 Unmodified _QMDPSSNFY_ ENSG00000138670|ENST00000264400|RASGEF1B;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B 41.8396318013385 0.0653578398400075 1 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D[PS]SN{M(Oxidation (M))|F}Y 9 0 + 33.512 0.0 0.0 3.0818 3.0818 74.839 0.0 0.0 0.0 5.174163270559731 10.228565885290353 5.174163270559731 6.385660892079599 0 0.7742275032520141 0.5686362358410126 1.610924374808178 0.3807196863200844 + + {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D[PS]SN{M(Oxidation (M))|F}Y;[VG]CD[PS]SN{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D[PS]SGG{M(Oxidation (M))|F}Y;[PS][CS][PS]SN{M(Oxidation (M))|F}Y;[DP]T[MN]SN{M(Oxidation (M))|F}Y;[PS]E[MN]SN{M(Oxidation (M))|F}Y;[VG]CD[PS]SGG{M(Oxidation (M))|F}Y;{[CP]|[EA]}P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SN{M(Oxidation (M))|F}Y;{[CP]|[EA]}{[CA]|SS}[RD]N{M(Oxidation (M))|F}Y;{[CP]|[EA]}{[CA]|SS}[PS]SN{M(Oxidation (M))|F}Y 3.0818;2.4945;2.235;2.1966;1.8807;1.7752;1.6518;1.5094;1.3369;1.33 +;-;-;-;-;-;-;-;-;- + 689 1 2.173 89061.7 1.0 3317 3457 6774 DOHH2_400M_050219_1,6776 DOHH2_400M_050219_1,6776,QMDPSSNFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6777 37.591 7.2 10339000.0 25 0 1637000.0 + 19642 LGFSWTLGLL 10 83 369.5455146417594 1105.6147145254783 3 369.5453674197197 MULTI CID FTMS 0 0 0 6774 7193041.5 0.8147900474983722 -1 0.096649169921875 3 Unmodified _LGFSWTLGLL_ REV__ENSG00000117114|ENST00000686636|ADGRL2;REV__ENST00000464775.5_1_1:82445609-82456083:+|nuORF;REV__nc|ENSG00000117114|O95490-2|ADGRL2;REV__nc|ENSG00000117114|O95490-3|ADGRL2;REV__nc|ENSG00000117114|O95490-4|ADGRL2;REV__nc|ENSG00000117114|O95490-5|ADGRL2;REV__nc|ENSG00000117114|O95490-6|ADGRL2;REV__nc|ENSG00000117114|O95490-7|ADGRL2;REV__nc|ENSG00000117114|O95490|ADGRL2 11.640296217721598 0.652229146672156 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WT]|[RM]}KEK 7 -1 18.773 0.0 0.0 1.6979 0.0 0.0 0.0 170.09186231284085 170.09186231284085 4.168497772343898 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WT]|[RM]}KEK 1.6979 - 390 1 2.173 66241.8 1.0 3318 3457 6774 DOHH2_400M_050219_1,6777 DOHH2_400M_050219_1,6777,LGFSWTLGLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6778 37.593 79.0 2168300.0 25 0 302800.0 + -1 GLKVANMLN 9 121 488.2667072962619 974.518861659324 2 488.2670776247978 MULTI CID FTMS 0 0 0 6774 620474.25 0.7405668913772744 -1 0.096649169921875 4 Oxidation (M) _GLKVANM(Oxidation (M))LN_ REV__ENST00000399604.4_1_17:5084193-5085186:-|nuORF 34.10243960390752 0.1078313939113124 1 G{I|L}KVE 5 -1 62.053 0.0 0.0 6.3675 0.0 0.0 0.0 445.1848238580688 445.1848238580688 23.441194195999493 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.3054621874040891 0.3252574989159953 G{I|L}KVE 6.3675 - 1318 + 1 2.173 132573.2 1.0 3319 3457 6774 DOHH2_400M_050219_1,6778 DOHH2_400M_050219_1,6778,GLKVANMLN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6779 37.598 254.0 659880.0 25 0 36862.0 + 40786 VLLKARLVPA 10 136 360.58193029303135 1078.723961479294 3 360.5815002322197 MULTI CID FTMS 0 0 0 6774 284411.875 0.1141229019030423 -1 0.096649169921875 5 Unmodified _VLLKARLVPA_ ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B 38.61474834105838 0.1721950110283317 1 [{I|L}V][KQ]V{I|L}{I|L}V 8 5 47.427 0.0 0.0 4.3965 0.0 0.0 0.0 183.07860033653563 183.07860033653563 2.0205343810444987 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.6307196863200843 [{I|L}V][KQ]V{I|L}{I|L}V 4.3965 - 325 1 2.173 153313.8 1.0 3320 3457 6774 DOHH2_400M_050219_1,6779 DOHH2_400M_050219_1,6779,VLLKARLVPA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6780 37.602 202.0 650470.0 25 0 52871.0 + 19659 LGIEKMREI 9 141 363.5421613941247 1087.6046547825742 3 363.5416442751884 MULTI CID FTMS 0 0 0 6774 262958.5 0.905758285401083 -1 0.096649169921875 6 Unmodified _LGIEKMREI_ ENSG00000083067|ENST00000677713|TRPM3;nc|ENSG00000083067|Q9HCF6-10|TRPM3;nc|ENSG00000083067|Q9HCF6-11|TRPM3;nc|ENSG00000083067|Q9HCF6-2|TRPM3;nc|ENSG00000083067|Q9HCF6-4|TRPM3;nc|ENSG00000083067|Q9HCF6-5|TRPM3;nc|ENSG00000083067|Q9HCF6-6|TRPM3;nc|ENSG00000083067|Q9HCF6-7|TRPM3;nc|ENSG00000083067|Q9HCF6-8|TRPM3;nc|ENSG00000083067|Q9HCF6|TRPM3 29.84058131909904 0.1515068451768857 1 {[VA]|[{I|L}G]}D[YV]KE 7 6 21.577 0.0 0.0 1.9839 0.0 0.0 0.0 280.1687132438414 280.1687132438414 8.477591458552574 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.6549471895720985 0.0 {[VA]|[{I|L}G]}D[YV]KE 1.9839 - 394 1 2.173 109214.3 1.0 3321 3457 6774 DOHH2_400M_050219_1,6780 DOHH2_400M_050219_1,6780,LGIEKMREI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6781 37.604 112.0 610830.0 25 0 48025.0 + 25682 NGYKRVLAL 9 94 517.3118065273209 1032.6090601214416 2 517.3124877810478 MULTI CID FTMS 0 0 0 6774 318867.5625 0.8823694680590627 -1 0.096649169921875 7 Unmodified _NGYKRVLAL_ ENSG00000089157|ENST00000392514|RPLP0;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 52.268347100219714 0.0353964759249114 1 NGYK{I|L}{I|L}VN{I|L} 9 4 + 35.842 0.0 0.0 3.471 3.471 84.047 0.0 0.0 0.0 13.134862575211065 0.6201497276602979 0.6201497276602979 35.84175931466569 0 1.4291746928241125 0.9208187539523752 0.0 0.0 NGYK{I|L}{I|L}VN{I|L} 3.471 - 71 + 1 2.173 55966.9 1.0 3322 3457 6774 DOHH2_400M_050219_1,6781 DOHH2_400M_050219_1,6781,NGYKRVLAL True True NGYKRVLAL 37.60424 517.312487781048 1256051.875 6774.0 ENSG00000089157|ENST00000392514|RPLP0;;nc|ENSG00000213553|Q8NHW5|RPLP0P6;;nc|ENSG00000089157|P05388-2|RPLP0 3.5820873280366263 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6782 37.618 800.0 203450.0 25 0 13503.0 -1 0 112 865.8993730714867 1729.784193209773 2 865.9000732302666 MULTI CID FTMS 0 0 0 6774 244580.75 0.6975706814719587 2 -0.2491188049316406 8 1 [NP]{I|L}N{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 73.048 0.0 0.0 4.223 4.223 78.846 0.0 0.0 0.0 7.095690636129888 43.00312209084182 7.095690636129888 6.989700043360188 0 1.2302046884880935 0.9208187539523752 0.0 0.4247425010840047 [NP]{I|L}N{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}{M(Oxidation (M))|F}N{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{I|L}Q{[CT]|[{M(Oxidation (M))|F}G]}N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{I|L}E[WM]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}{M(Oxidation (M))|F}N{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.223;3.8189;3.7009;3.7009;3.7009;3.5243;3.487;3.3838;3.323;3.2968 -;-;-;-;-;-;-;-;-;- 2652 1 2.173 110267.9 0.8399999737739563 3323 3457 6774 DOHH2_400M_050219_1,6782 DOHH2_400M_050219_1,6782, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6783 37.621 128.0 408280.0 25 0 28205.0 + 16313 IYDELEDQF 9 86 586.260293189398 0 586.2599365115166 PEAK CID FTMS 0 0 0 6774 230696.28125 0.8995580306472946 -1 0.096649169921875 9 Unmodified _IYDELEDQF_ REV__ENSG00000166432|ENST00000651725|ZMAT1;REV__ENSG00000166432|ENST00000651725|ZMAT1;REV__ENSG00000172086|ENST00000347055|KRCC1;REV__nc|ENSG00000166432|Q5H9K5-2|ZMAT1;REV__nc|ENSG00000166432|Q5H9K5-2|ZMAT1;REV__nc|ENSG00000166432|Q5H9K5|ZMAT1;REV__nc|ENSG00000166432|Q5H9K5|ZMAT1 21.74664581756881 0.185237546287679 1 Q{I|L}CQ{I|L}T 6 -1 34.078 0.0 0.0 2.9114 0.0 0.0 165.08136411141464 316.0426424615844 481.1240065729991 0.0 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.7614393726401688 0.0 Q{I|L}CQ{I|L}T 2.9114 - 137 + 1 2.173 44241.4 1.0 3324 3457 6774 DOHH2_400M_050219_1,6783 DOHH2_400M_050219_1,6783,IYDELEDQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6784 37.624 185.0 385070.0 25 0 59246.0 -1 0 107 398.23045629931806 794.4463596654361 2 398.2308532595634 MULTI CID FTMS 0 0 0 6774 143771.0625 0.3135491025699217 4 -0.4753532409667969 10 1 {M(Oxidation (M))|F} 1 -1 10.181 0.0 0.0 1.2815 0.0 0.0 629.3673324210987 0.0 629.3673324210987 0.0 6.201660776551847 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2815 - 15 + 1 2.173 62204.0 1.0 3325 3457 6774 DOHH2_400M_050219_1,6784 DOHH2_400M_050219_1,6784, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6785 37.638 800.0 314330.0 25 0 16244.0 + 13764 HSDPMFSSY 9 222 535.7162294950541 1069.417906056908 2 535.7162963747978 MULTI CID FTMS 0 0 0 6774 126553.3125 0.6106911278534729 -1 0.096649169921875 11 Unmodified _HSDPMFSSY_ ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3 100.37149154755038 0.0107586824602606 1 [HS]DPM{M(Oxidation (M))|F}SSY 9 0 + 65.544 0.0 0.0 6.1289 6.1289 86.197 0.0 0.0 0.0 4.137342758552691 52.875240784723374 4.137342758552691 7.689549981487076 0 1.325257498915995 0.0 1.8169015600442573 0.0 + + [HS]DPM{M(Oxidation (M))|F}SSY;{[{M(Oxidation (M))|F}C]|[YS]}WM{M(Oxidation (M))|F}SSY;{[WS]|[C(Carbamidomethyl (C)){I|L}]}YM{M(Oxidation (M))|F}SSY;[QA]SDTPDSSY;[QA]SSEPDSSY;[HM]S{M(Oxidation (M))|F}PDSSY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[DS]|[MA]|[CV]|TT}M{M(Oxidation (M))|F}SSY;[QA]SDE[PS]SSY;{[CT]|[{M(Oxidation (M))|F}G]}[MT]M{M(Oxidation (M))|F}SSY;[HS]MDP{M(Oxidation (M))|F}SSY 6.1289;5.4099;5.0543;5.0499;5.0499;4.6819;4.3824;4.1936;4.0714;4.0456 +;-;-;-;-;-;-;-;-;- + 1997 1 2.173 190040.6 0.6000000238418579 3326 3457 6774 DOHH2_400M_050219_1,6785 DOHH2_400M_050219_1,6785,HSDPMFSSY True True HSDPMFSSY 37.638107 535.716296374798 1648235.0 6774.0 ENSG00000147548|ENST00000317025|NSD3;;nc|ENSG00000147548|Q9BZ95-5|NSD3;;nc|ENSG00000147548|Q9BZ95-4|NSD3 8.667094866434732 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6786 37.645 310.0 194450.0 25 0 17434.0 + 3746 DAFYKEQL 8 99 507.2516291510231 1012.488705368846 2 507.2509948611259 MULTI CID FTMS 0 0 0 6774 124943.09375 1.0 0 0.0 12 Unmodified _DAFYKEQL_ ENSG00000106554|ENST00000262570|CHCHD3;ENST00000466644.5_1_7:132523157-132766697:-|nuORF 25.399314129420983 0.5099049743284904 1 {[DA]|[EG]}{M(Oxidation (M))|F}Y 4 4 35.846 0.0 0.0 3.5404 0.0 0.0 0.0 513.2664764785966 513.2664764785966 17.641821181698774 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}{M(Oxidation (M))|F}Y 3.5404 + + 241 + 1 2.173 51499.5 1.0 3327 3457 6774 DOHH2_400M_050219_1,6786 DOHH2_400M_050219_1,6786,DAFYKEQL False True DAFYKEQL 37.644928 507.250994861126 602117.875 6774.0 ENSG00000106554|ENST00000262570|CHCHD3;;ENST00000466644.5_1_7:132523157-132766697:-|nuORF 5.62244971593221 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6787 37.654 526.0 239750.0 25 0 18877.0 + 587 AEISQPPAL 9 152 463.253654643104 924.492756353008 2 463.2537719607353 MULTI CID FTMS 0 0 0 6774 119900.1953125 1.0 0 0.0 13 Unmodified _AEISQPPAL_ ENSG00000141002|ENST00000263346|TCF25 39.957323273325 0.0756908302845263 1 PPA{I|L} 4 5 29.385 0.0 0.0 3.1786 0.0 0.0 528.2549238878653 0.0 528.2549238878653 0.0 16.989700043360184 0.0 0.0 0 1.0 0.0 0.0 0.0 + PPA{I|L} 3.1786 + + 193 + 1 2.173 100072.0 1.0 3328 3457 6774 DOHH2_400M_050219_1,6787 DOHH2_400M_050219_1,6787,AEISQPPAL True True AEISQPPAL 37.654172 463.253771960735 813751.375 6774.0 ENSG00000141002|ENST00000263346|TCF25 5.200466791788737 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6788 37.657 156.0 875450.0 25 0 113220.0 + 40788 VLLKARLVPA 10 80 540.3689072237219 1078.7232615142436 2 540.3697387576103 MULTI CID FTMS 0 0 0 6774 87008.328125 0.0844379421725816 -1 0.096649169921875 14 Unmodified _VLLKARLVPA_ ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B 46.0223103267499 0.103496714999793 1 V{I|L}{I|L}KA 5 5 60.745 0.0 0.0 5.6312 0.0 0.0 0.0 551.3308809869749 551.3308809869749 13.489765575595314 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + V{I|L}{I|L}KA 5.6312 + + 111 + 1 2.173 111512.5 1.0 3329 3457 6774 DOHH2_400M_050219_1,6788 DOHH2_400M_050219_1,6788,VLLKARLVPA True True VLLKARLVPA 37.657271 540.36973875761 36158882.0 6774.0 ENSG00000144369|ENST00000304698|FAM171B;;nc|ENSG00000144369|Q6P995-2|FAM171B 6.708710670471191 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6789 37.671 800.0 183700.0 25 0 7079.4 + -1 KRIDIIHNL 9 155 561.3473117714858 560.3400353048858 1 561.3452636599541 MULTI CID FTMS 0 0 0 6774 86158.3671875 1.0 0 0.0 15 ENSG00000163872|ENST00000305135|YEATS2 1 GHN{I|L} 4 -1 17.322 0.0 0.0 3.0914 0.0 0.0 121.12761572656387 0.0 121.12761572656387 0.0 4.223313006032363 0.0 0.0 0 0.0 0.0 0.0 0.6237125054200234 GHN{I|L} 3.0914 - 95 + 1 2.173 112283.7 0.4799999892711639 3330 3457 6774 DOHH2_400M_050219_1,6789 DOHH2_400M_050219_1,6789, False False KRIDIIHNL 37.671103 561.345263659954 378623.65625 6774.0 ENSG00000163872|ENST00000305135|YEATS2 3.196418205897013 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6790 37.686 800.0 55515.0 25 0 5237.7 44009 YIERLFDQWY 10 80 716.8462087630581 0 716.8062621951103 PEAK CID FTMS 0 0 0 6774 44071.08203125 0.9415289204643938 1 -0.1282157897949218 16 Unmodified _YIERLFDQWY_ ENSG00000163618|ENST00000383710|CADPS;ENST00000474560.1_1_3:62385083-62423949:-|nuORF;nc|ENSG00000163618|Q9ULU8-2|CADPS;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS 4.3292370932331545 0.3961065659209837 1 QMD 3 9 9.2968 0.0 0.0 0.64937 0.0 0.0 781.3924164501412 273.12446008853755 1054.5168765386788 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QMD 0.64937 - 33 + 1 2.173 37712.7 0.4900000095367431 3331 3457 6774 DOHH2_400M_050219_1,6790 DOHH2_400M_050219_1,6790,YIERLFDQWY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6791 37.7 800.0 65610.0 25 0 16564.0 -1 0 36 1190.8217887444357 3569.443536833507 3 1191.489672839642 MULTI CID FTMS 0 0 0 6774 163740.75 1.0 0 0.0 17 1 E 1 -1 5.4846 0.0 0.0 0.15365 0.0 0.0 2913.2176649653065 524.1634005182249 3437.3810654835315 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15365 - 2 + 1 2.173 50083.6 0.5099999904632568 3332 3457 6774 DOHH2_400M_050219_1,6791 DOHH2_400M_050219_1,6791, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6793 37.706 121.0 384110.0 25 0 79078.0 41588 VPPKVTTT 8 72 421.7516385099368 841.4887240866735 2 421.7516357302666 MULTI CID FTMS 0 0 0 6792 466560.0625 0.9084423454631404 1 -0.1209030151367187 1 Unmodified _VPPKVTTT_ ENSG00000113249|ENST00000523175|HAVCR1 2.577480529830294 0.808687252328423 1 T 1 7 3.4949 0.0 0.0 0.41532 0.0 0.0 319.30172565092977 418.1251314752563 737.4268571261861 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + T 0.41532 + + 1 + 1 2.176 43297.5 1.0 3333 3458 6792 DOHH2_400M_050219_1,6793 DOHH2_400M_050219_1,6793,VPPKVTTT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6794 37.712 325.0 177800.0 25 0 13374.0 + 19442 LFAMGNRRY 9 81 564.2904472825355 1126.566341631871 2 564.2904540896416 MULTI CID FTMS 0 0 0 6792 102910.4609375 0.2051862807087678 1 -0.1209030151367187 2 Unmodified _LFAMGNRRY_ REV__ENSG00000196284|ENST00000371459|SUPT3H;REV__nc|ENSG00000196284|O75486-4|SUPT3H 19.438996006549623 0.310492472477042 1 GY 2 -1 16.454 0.0 0.0 1.4605 0.0 0.0 888.4705144607757 0.0 888.4705144607757 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 GY 1.4605 - 46 + 1 2.176 48674.3 1.0 3334 3458 6792 DOHH2_400M_050219_1,6794 DOHH2_400M_050219_1,6794,LFAMGNRRY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6795 37.714 84.0 822470.0 25 0 42127.0 + 10816 FYWRPMREWDY 11 86 824.8718722642399 1647.7291915952796 2 824.8721191287041 MULTI CID FTMS 0 0 0 6792 629910.0625 0.8389787405064493 -1 0.1282157897949218 3 Unmodified _FYWRPMREWDY_ REV__ENSG00000052802|ENST00000261507|MSMO1 1.4819007175156935 0.86815623132643 1 {NN|[MP]|[D{I|L}]|[EV]}YMEGAQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 14 -1 + 93.497 0.0 0.0 5.6743 5.6743 83.668 0.0 0.0 0.0 6.06446953481715 76.10161358642024 6.06446953481715 6.667853209646168 0 0.8494850021680094 0.0 0.0 1.610924374808178 {NN|[MP]|[D{I|L}]|[EV]}YMEGAQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YMWAQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YMEQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[YQ][KC]EGAQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YMEGAQGGA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YMEGA[AG]NA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[YQ][KC]WAQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[YQ][KC]EQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YMWAQGGA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YMWA[AG]NA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 5.6743;5.2696;5.2696;5.2597;5.1251;5.1251;4.855;4.855;4.719;4.719 -;-;-;-;-;-;-;-;-;- 2429 1 2.176 53579.3 1.0 3335 3458 6792 DOHH2_400M_050219_1,6795 DOHH2_400M_050219_1,6795,FYWRPMREWDY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6796 37.716 69.0 906700.0 25 0 138140.0 + 35853 SVLEKQVSL 9 101 501.794423572439 1001.574294211678 2 501.7933227419853 MULTI CID FTMS 0 0 0 6792 552572.875 1.0 0 0.0 4 Unmodified _SVLEKQVSL_ ENSG00000166037|ENST00000325542|CEP57;ENST00000432815.2_1_1:173332252-173332432:-|nuORF;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;ENST00000541768.1_1_11:95546181-95551118:+|nuORF;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 43.77239144664712 0.0547478964384323 1 [VS]{I|L}AQVS 7 3 66.018 0.0 0.0 6.5914 0.0 0.0 0.0 314.1694503844678 314.1694503844678 26.56902371637222 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.6307196863200843 0.3252574989159953 [VS]{I|L}AQVS 6.5914 - 971 1 2.176 52221.0 1.0 3336 3458 6792 DOHH2_400M_050219_1,6796 DOHH2_400M_050219_1,6796,SVLEKQVSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6797 37.718 75.0 742270.0 25 0 48417.0 -1 YLFYCKNCRFY 11 72 788.8554966764539 1575.6964404197076 2 788.8558227419853 MULTI CID FTMS 0 0 0 6792 476676.03125 0.5217624007750209 -1 0.1282157897949218 5 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 1 AQQNA{M(Oxidation (M))|F}Y 7 -1 49.469 0.0 0.0 3.1395 0.0 0.0 735.3219471662125 0.0 735.3219471662125 0.0 34.86448853222001 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.8494850021680094 AQQNA{M(Oxidation (M))|F}Y 3.1395 - 218 1 2.176 46361.3 1.0 3337 3458 6792 DOHH2_400M_050219_1,6797 DOHH2_400M_050219_1,6797,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6798 37.72 115.0 672710.0 25 0 75293.0 + 34467 SMDEKVELY 9 106 557.2602239971421 1112.5058950610842 2 557.2607910037041 MULTI CID FTMS 0 0 0 6792 435769.5625 0.2378696691030723 -1 0.1282157897949218 6 Unmodified _SMDEKVELY_ ENSG00000131143|ENST00000253452|COX4I1 45.739877483867886 0.0497104363764649 1 {[MS]|[{M(Oxidation (M))|F}A]}[RP]E{I|L}MSY 9 6 + 60.697 0.0 0.0 5.4558 5.4558 77.607 0.0 0.0 0.0 1.812412373755876 14.973024840566469 1.812412373755876 1.812412373755876 0 0.8807196863200843 1.6989700043360187 0.3807196863200844 0.0 {[MS]|[{M(Oxidation (M))|F}A]}[RP]E{I|L}MSY;{NN|[MP]|[D{I|L}]|[EV]}KDE{I|L}MSY;{[MS]|[{M(Oxidation (M))|F}A]}DE[K{I|L}]D{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KVE{I|L}MSY;{[MS]|[{M(Oxidation (M))|F}A]}[RP]E{[MS]|[{M(Oxidation (M))|F}A]}{I|L}Y;{[MS]|[{M(Oxidation (M))|F}A]}[RP]{[MS]|[{M(Oxidation (M))|F}A]}E{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VDE{I|L}MSY;{NN|[MP]|[D{I|L}]|[EV]}KDE{[MS]|[{M(Oxidation (M))|F}A]}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}KD{[MS]|[{M(Oxidation (M))|F}A]}E{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DVE{I|L}MSY 5.4558;5.2929;4.9095;4.7794;4.761;4.7139;4.6275;4.5981;4.551;4.5128 -;-;-;-;-;-;-;-;-;- 1400 1 2.176 61093.8 1.0 3338 3458 6792 DOHH2_400M_050219_1,6798 DOHH2_400M_050219_1,6798,SMDEKVELY True True SMDEKVELY 37.719963 557.260791003704 10044082.0 6792.0 ENSG00000131143|ENST00000253452|COX4I1 7.493441740671794 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6799 37.722 112.0 573260.0 25 0 58730.0 + 534 AEIDSIHQL 9 85 513.2672224690509 1024.5198920049015 2 513.2675659060478 MULTI CID FTMS 0 0 0 6792 421562.78125 0.7287695105081579 -1 0.1282157897949218 7 Unmodified _AEIDSIHQL_ ENSG00000168818|ENST00000306200|STX18;ENST00000503692.5_1_4:4422578-4426973:-|nuORF 62.57269311338072 0.0246576765497938 1 {[CP]|[EA]}{I|L}DS{I|L}HQ{I|L} 9 0 + 61.477 0.0 0.0 6.0005 6.0005 91.937 0.0 0.0 0.0 20.89063610120181 21.765775469128563 20.89063610120181 23.015384402724592 0 0.8252574989159953 0.0 0.4247425010840047 1.3807196863200843 + + {[CP]|[EA]}{I|L}DS{I|L}HQ{I|L};{[CP]|[EA]}{I|L}DS{I|L}H[AG]{I|L};{[CP]|[EA]}{I|L}{[WT]|[RM]}S[YR];{[CP]|[EA]}{I|L}{[CA]|SS}{I|L}S[YR];{NN|[MP]|[D{I|L}]|[EV]}SH{I|L}E{I|L}[QA];{[CP]|[EA]}{I|L}[{M(Oxidation (M))|F}V]Q[YR];{[TV]|[{I|L}S]}HD{I|L}E{I|L}[QA];{[CP]|[EA]}{I|L}[{M(Oxidation (M))|F}V][AG][YR];{[TV]|[{I|L}S]}DH{I|L}E{I|L}[QA];{[CP]|[EA]}{I|L}[{M(Oxidation (M))|F}V][RH][PG] 6.0005;3.7541;3.1663;3.1163;3.0322;2.829;2.228;1.9249;1.7623;1.6311 +;-;-;-;-;-;-;-;-;- + 583 + 1 2.176 53114.0 1.0 3339 3458 6792 DOHH2_400M_050219_1,6799 DOHH2_400M_050219_1,6799,AEIDSIHQL True True AEIDSIHQL 37.722327 513.267565906048 3284554.25 6792.0 ENST00000503692.5_1_4:4422578-4426973:-|nuORF;;ENSG00000168818|ENST00000306200|STX18 6.401065667470296 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6800 37.727 252.0 378120.0 25 0 54011.0 + 14091 IAPSHVIEM 9 115 498.7628619275687 995.5111709219374 2 498.7632324099541 MULTI CID FTMS 0 0 0 6792 248513.90625 1.0 0 0.0 8 Unmodified _IAPSHVIEM_ ENSG00000184863|ENST00000401878|RBM33;ENST00000307403.6_1_7:155532339-155538302:+|nuORF 34.10243960390752 0.1078313939113124 1 {I|L}A{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V[R{M(Oxidation (M))|F}] 8 5 + 54.882 0.0 0.0 5.513 5.513 89.409 0.0 0.0 0.0 36.92348741261036 6.989700043360188 6.989700043360188 18.061799739838875 0 0.4247425010840047 2.0 0.0 0.0 {I|L}A{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V[R{M(Oxidation (M))|F}];{I|L}A[PS]Y{I|L}[W{M(Oxidation (M))|F}];{I|L}[YG]E{I|L}V[R{M(Oxidation (M))|F}];{I|L}A[PS]Y{M(Oxidation (M))|F}[W{I|L}];{I|L}{[YD]|[{M(Oxidation (M))|F}M]}A{I|L}V[R{M(Oxidation (M))|F}];{I|L}A{[YD]|[{M(Oxidation (M))|F}M]}[YR][VP];{I|L}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}AV[R{M(Oxidation (M))|F}];{I|L}[HT]E{I|L}[RP]M;{I|L}[YG]E[YR][VP];{I|L}[YG][TP]{I|L}[W{M(Oxidation (M))|F}] 5.513;3.6987;3.4597;3.2194;3.0773;2.9273;2.2956;0.9065;0.8741;0.66906 -;-;-;-;-;-;-;-;-;- 359 + 1 2.176 74755.9 1.0 3340 3458 6792 DOHH2_400M_050219_1,6800 DOHH2_400M_050219_1,6800,IAPSHVIEM True True IAPSHVIEM 37.727002 498.763232409954 1217377.5 6792.0 ENSG00000184863|ENST00000401878|RBM33;;ENST00000307403.6_1_7:155532339-155538302:+|nuORF 5.528223037719727 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6801 37.741 800.0 373890.0 25 0 37704.0 + 43782 YEMEVSQRL 9 141 577.7794401104767 0 577.7795287966728 PEAK CID FTMS 0 0 0 6792 229378.078125 0.5204279405928842 -1 0.1282157897949218 9 Unmodified _YEMEVSQRL_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 99.7552728972412 0.0289346139657567 1 EMEVSQ 6 3 72.174 0.0 0.0 6.2567 0.0 0.0 163.06262119579043 284.17331873111567 447.2359399269061 0.0 0.0 0.0 0.0 0 1.4204841662593095 0.0 1.6976212463643423 1.2856668758921828 + EMEVSQ 6.2567 + + 368 + 1 2.176 221143.0 0.8600000143051147 3341 3458 6792 DOHH2_400M_050219_1,6801 DOHH2_400M_050219_1,6801,YEMEVSQRL True True YEMEVSQRL 37.740834 577.779528796673 2401997.5 6792.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 5.271829764048259 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6802 37.755 800.0 238030.0 25 0 42404.0 -1 EMYQELMEMCH 11 143 766.7783785076341 1531.542204082068 2 766.7788574099541 MULTI CID FTMS 0 0 0 6792 181442.09375 0.5812145133778059 -1 0.1282157897949218 10 Carbamidomethyl (C),2 Oxidation (M) _EMYQELM(Oxidation (M))EM(Oxidation (M))C(Carbamidomethyl (C))H_ ENSG00000144010|ENST00000639673|TRIM43B;ENSG00000144015|ENST00000272395|TRIM43 3.2813086475875832 0.8596665074481906 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}CSNSNPMNCR 13 -1 + 62.873 0.0 0.0 4.1052 4.1052 82.507 0.0 0.0 0.0 2.619057469151948 7.171199159851206 2.619057469151948 9.877363141768091 0 2.601342204748164 0.0 0.6109243748081782 1.079689690656103 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}CSNSNPMNCR;[NP]SND{M(Oxidation (M))|F}{M(Oxidation (M))|F}MGMNCR;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}CSNS{[HG]|PP}{[{M(Oxidation (M))|F}D]|MM}CR;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}CSNST[PG][NS]CR;[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}DSNSNPMNCR;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}CNSSNPMNCR;[NP]SND{M(Oxidation (M))|F}M{M(Oxidation (M))|F}GMNCR;[MT]YDSNS{[HG]|PP}{[{M(Oxidation (M))|F}D]|MM}CR;[NP]SND{M(Oxidation (M))|F}E{[{M(Oxidation (M))|F}C]|[YS]}[NS]CR;[NP]SND{M(Oxidation (M))|F}{M(Oxidation (M))|F}MT[NS]CR 4.1052;3.4603;3.2732;3.0873;2.9835;2.9609;2.9372;2.7236;2.6308;2.6079 -;-;-;-;-;-;-;-;-;- 4754 1 2.176 135907.7 0.75 3342 3458 6792 DOHH2_400M_050219_1,6802 DOHH2_400M_050219_1,6802,EMYQELMEMCH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6803 37.769 800.0 269730.0 25 0 14960.0 -1 LSCCERQLK 9 160 597.2945754912713 1192.5745980493425 2 597.2950317263603 MULTI CID FTMS 0 0 0 6792 144130.15625 1.0 0 0.0 11 2 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))C(Carbamidomethyl (C))ERQLK_ ENST00000297135.7_1_7:107204466-107204610:-|nuORF 11.640296217721598 0.521594087909532 1 {I|L}[HK]EQK{I|L} 7 -1 21.969 0.0 0.0 1.8421 0.0 0.0 298.0563337786178 0.0 298.0563337786178 0.0 7.98924322071808 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.7967716608392861 {I|L}[HK]EQK{I|L} 1.8421 - 1097 + 1 2.176 161571.8 0.6899999976158142 3343 3458 6792 DOHH2_400M_050219_1,6803 DOHH2_400M_050219_1,6803,LSCCERQLK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6804 37.774 294.0 375060.0 25 0 59314.0 -1 TVILVMLR 8 105 480.7998833272157 959.5852137212314 2 480.7997314333916 MULTI CID FTMS 0 0 0 6792 124806.3203125 1.0 0 0.0 12 Oxidation (M) _TVILVM(Oxidation (M))LR_ ENSG00000141194|ENST00000268912|OR4D1;ENSG00000166884|ENST00000300127|OR4D6 5.230669730166228 0.792582437072536 1 [VS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{I|L}P]R 7 -1 21.814 0.0 0.0 2.2732 0.0 0.0 0.0 110.11519738553048 110.11519738553048 9.39097551122849 0.0 0.0 0.0 0 0.25 1.3979400086720375 0.6861818737241735 0.4247425010840047 [VS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{I|L}P]R 2.2732 - 153 1 2.176 89878.2 1.0 3344 3458 6792 DOHH2_400M_050219_1,6804 DOHH2_400M_050219_1,6804,TVILVMLR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6805 37.78 223.0 316710.0 25 0 26952.0 + 32698 SEAELMRSM 9 90 527.2380731512571 1052.4615933693142 2 527.2385131716728 MULTI CID FTMS 0 0 0 6792 120664.671875 0.5098516911805775 -1 0.1282157897949218 13 Unmodified _SEAELMRSM_ ENSG00000137574|ENST00000260129|TGS1;ENST00000523948.5_1_8:56686169-56737149:+|nuORF 55.50274090549119 0.0285720310785888 1 {[ES]|[DT]|[{I|L}C]}AE{I|L}MRSM 9 0 + 54.446 0.0 0.0 5.1732 5.1732 89.755 0.0 0.0 0.0 41.68202944948067 5.440272245059212 5.440272245059212 40.49926291259105 0 1.424742501084005 0.0 0.4247425010840047 0.0 + + {[ES]|[DT]|[{I|L}C]}AE{I|L}MRSM;{[ES]|[DT]|[{I|L}C]}A[HT][YK]SM;[R{M(Oxidation (M))|F}][EP]MRSM 5.1732;1.3252;0.73279 +;-;- + 131 + 1 2.176 58033.1 1.0 3345 3458 6792 DOHH2_400M_050219_1,6805 DOHH2_400M_050219_1,6805,SEAELMRSM True True SEAELMRSM 37.779579 527.238513171673 790858.1875 6792.0 ENSG00000137574|ENST00000260129|TGS1;;ENST00000523948.5_1_8:56686169-56737149:+|nuORF 4.241408348083496 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6806 37.786 341.0 153450.0 25 0 10128.0 -1 0 85 523.2709651084699 522.2636886418699 1 523.2747070193291 MULTI CID FTMS 0 0 0 6792 98586.7890625 0.4148674874916182 3 -0.347137451171875 14 1 W 1 -1 15.485 0.0 0.0 2.9649 0.0 0.0 318.17330885846985 0.0 318.17330885846985 0.0 1.259468063412541 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.9649 - 25 + 1 2.176 46947.4 1.0 3346 3458 6792 DOHH2_400M_050219_1,6806 DOHH2_400M_050219_1,6806, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6807 37.8 800.0 95824.0 25 0 4500.4 + 7153 EENNPLETEY 10 134 619.2643031984808 0 619.2642089724541 PEAK CID FTMS 0 0 0 6792 94060.3515625 1.0 0 0.0 15 Unmodified _EENNPLETEY_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 26.268140514670165 0.2477853539698685 1 PPN 3 9 12.862 0.0 0.0 1.0402 0.0 0.0 574.2517376452053 351.09736047916255 925.349098124368 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5554621874040891 PPN 1.0402 - 112 + 1 2.176 62371.8 0.5199999809265137 3347 3458 6792 DOHH2_400M_050219_1,6807 DOHH2_400M_050219_1,6807,EENNPLETEY False True EENNPLETEY 37.799591 619.264208972454 887339.0625 6792.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 5.492388884226481 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6808 37.802 87.0 1103600.0 25 0 92346.0 + 4744 DEIDAIGGRRF 11 85 416.8826169739573 1247.626021522072 3 416.8833190798759 MULTI CID FTMS 0 0 0 6792 91725.9921875 0.1063770892930907 -2 0.2248649597167968 16 Unmodified _DEIDAIGGRRF_ ENSG00000100519|ENST00000445930|PSMC6 33.82136114134338 0.3075748195101961 1 DE{I|L}D{M(Oxidation (M))|F} 5 6 64.196 0.0 0.0 5.1454 0.0 0.0 0.0 625.3547401064214 625.3547401064214 49.15878117603789 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5 0.0 DE{I|L}D{M(Oxidation (M))|F} 5.1454 - 161 + 1 2.176 84689.6 1.0 3348 3458 6792 DOHH2_400M_050219_1,6808 DOHH2_400M_050219_1,6808,DEIDAIGGRRF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6809 37.815 800.0 115350.0 25 0 29590.0 -1 0 57 1193.133655613092 3576.3791374394764 3 1193.468920886517 MULTI CID FTMS 0 0 0 6792 155045.078125 0.8550369437456204 -1 0.1282157897949218 17 1 [WE][DN]T{I|L}{M(Oxidation (M))|F} 7 -1 11.457 0.0 0.0 0.32035 0.0 0.0 0.0 2667.9675523166825 2667.9675523166825 4.467357034147881 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 1.0 [WE][DN]T{I|L}{M(Oxidation (M))|F} 0.32035 - 97 1 2.176 79699.9 0.4600000083446502 3349 3458 6792 DOHH2_400M_050219_1,6809 DOHH2_400M_050219_1,6809, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6810 37.821 230.0 220740.0 25 0 40054.0 41273 VPHINEII 8 99 467.7723756442649 933.5301983553298 2 467.7717468142509 MULTI CID FTMS 0 0 0 6792 103740.0234375 0.6890271422891745 -1 0.1282157897949218 18 Unmodified _VPHINEII_ nc|ENSG00000138036|Q8TCX1-5|DYNC2LI1 32.116972079565 0.368454113111938 1 {I|L}{I|L} 2 6 22.206 0.0 0.0 2.3787 0.0 0.0 689.3507072438049 0.0 689.3507072438049 0.0 6.758278680140034 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}{I|L} 2.3787 + + 256 + 1 2.176 42986.2 1.0 3350 3458 6792 DOHH2_400M_050219_1,6810 DOHH2_400M_050219_1,6810,VPHINEII False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6812 37.826 34.0 1226800.0 25 0 102460.0 + 11768 GLKVREYEL 9 68 553.8144426539409 1105.6143323746817 2 553.8146850466728 MULTI CID FTMS 0 0 0 6811 1124243.625 0.1971778156730812 1 -0.1000404357910156 1 Unmodified _GLKVREYEL_ ENSG00000142676|ENST00000643754|RPL11;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;nc|ENSG00000142676|P62913-2|RPL11 19.361941925380144 0.3125782356748823 1 KV 2 7 17.391 0.0 0.0 1.5729 0.0 0.0 170.1066435512766 705.3185308607067 875.4251744119833 0.0 0.0 0.0 0.0 0 0.6421590589602533 0.0 0.0 0.0 + KV 1.5729 + + 17 + 1 2.176 38218.4 1.0 3351 3459 6811 DOHH2_400M_050219_1,6812 DOHH2_400M_050219_1,6812,GLKVREYEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6813 37.827 51.0 1010400.0 25 0 172730.0 + 27967 PLVSPLEA 8 79 413.2388644783535 824.463176023507 2 413.2390930056572 MULTI CID FTMS 0 0 0 6811 783286.3125 0.5893531692676258 2 -0.2262344360351562 2 Unmodified _PLVSPLEA_ REV__ENSG00000107186|ENST00000319217|MPDZ;REV__ENST00000539508.5_1_9:13136054-13190160:-|nuORF;REV__nc|ENSG00000107186|O75970-2|MPDZ;REV__nc|ENSG00000107186|O75970-3|MPDZ;REV__nc|ENSG00000107186|O75970-5|MPDZ 0.7936320650641473 0.8195151834710337 1 {M(Oxidation (M))|F} 1 -1 0.9691 0.0 0.0 0.11754 0.0 0.0 411.2740413572945 263.13935266666255 674.413394023957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.11754 - 3 + 1 2.176 46477.6 1.0 3352 3459 6811 DOHH2_400M_050219_1,6813 DOHH2_400M_050219_1,6813,PLVSPLEA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6814 37.829 106.0 820320.0 25 0 177270.0 + 4745 DEIDAIGGRRF 11 52 624.8205679497537 1247.6265829663073 2 624.8206054568291 MULTI CID FTMS 0 0 0 6811 498880.625 0.8591081713913317 -1 0.1209030151367187 3 Unmodified _DEIDAIGGRRF_ ENSG00000100519|ENST00000445930|PSMC6 38.558800761779466 0.2345968962264943 1 DE{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F} 5 6 53.5 0.0 0.0 4.2881 0.0 0.0 0.0 625.3545005289593 625.3545005289593 12.35354666808 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.4247425010840047 0.3807196863200844 DE{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F} 4.2881 - 60 + 1 2.176 68612.8 1.0 3353 3459 6811 DOHH2_400M_050219_1,6814 DOHH2_400M_050219_1,6814,DEIDAIGGRRF False True DEIDAIGGRRF 37.829262 624.820605456829 3572118.75 6811.0 ENSG00000100519|ENST00000445930|PSMC6 5.882278919219971 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6815 37.833 177.0 531220.0 25 0 89409.0 + 10672 FVRDMIREV 9 97 388.8778514587186 0 388.8779785037041 PEAK CID FTMS 0 0 0 6811 318947.71875 0.5880976784772596 -1 0.1209030151367187 4 Unmodified _FVRDMIREV_ ENSG00000130255|ENST00000347512|RPL36 20.41088430110776 0.1973467372731266 1 M{I|L}V 3 6 11.198 0.0 0.0 1.4435 0.0 0.0 129.39491082583726 300.1308687799438 429.52577960578105 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L}V 1.4435 - 30 + 1 2.176 79251.1 1.0 3354 3459 6811 DOHH2_400M_050219_1,6815 DOHH2_400M_050219_1,6815,FVRDMIREV False True FVRDMIREV 37.832687 388.877978503704 3007220.5 6811.0 ENSG00000130255|ENST00000347512|RPL36 1.6935303608576455 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6816 37.835 108.0 690890.0 25 0 108790.0 + 5482 DLRTRVVL 8 85 486.3043466247103 970.5941403162204 2 486.3041259646416 MULTI CID FTMS 0 0 0 6811 306082.46875 0.7715302486057395 1 -0.1000404357910156 5 Unmodified _DLRTRVVL_ ENSG00000169919|ENST00000304895|GUSB;ENST00000476486.5_1_7:65444492-65445384:-|nuORF;nc|ENSG00000169919|P08236-2|GUSB;nc|ENSG00000169919|P08236-3|GUSB 15.847184025352805 0.6768015514314958 1 D{I|L}R 3 5 40.802 0.0 0.0 4.2038 0.0 0.0 0.0 583.3571871393186 583.3571871393186 26.197887582883936 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + D{I|L}R 4.2038 + + 39 + 1 2.176 61042.0 1.0 3355 3459 6811 DOHH2_400M_050219_1,6816 DOHH2_400M_050219_1,6816,DLRTRVVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6817 37.84 298.0 322110.0 25 0 47066.0 14280 IEIPVTPT 8 134 435.2515280440389 868.4885031548779 2 435.2510558962822 MULTI CID FTMS 0 0 0 6811 262351.75 0.1842046044173703 -10 1.1341323852539062 6 Unmodified _IEIPVTPT_ ENSG00000100982|ENST00000372409|PCIF1 2.302733041254933 0.8103549651115762 1 N 1 8 8.6292 0.0 0.0 0.99359 0.0 0.0 736.4345003246029 0.0 736.4345003246029 0.0 0.2195274284954109 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.99359 - 13 + 1 2.176 75386.5 1.0 3356 3459 6811 DOHH2_400M_050219_1,6817 DOHH2_400M_050219_1,6817,IEIPVTPT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6818 37.846 291.0 250490.0 25 0 22123.0 28847 QAGRLQPL 8 105 441.7616963900268 881.5088398468536 2 441.7614013552666 MULTI CID FTMS 0 0 0 6811 210991.828125 1.0 0 0.0 7 Unmodified _QAGRLQPL_ ENST00000507059.5_1_5:180043993-180056331:-|nuORF 40.44857923139169 0.2267865117615937 1 [QA]G[{I|L}A]{[NV]|[RG]}P{I|L} 9 3 + 29.203 0.0 0.0 3.3128 3.3128 70.223 0.0 0.0 0.0 6.243938818974687 6.839475728029431 6.243938818974687 1.7069622716897506 0 0.7742275032520141 1.154901959985743 0.0 0.0 [QA]G[{I|L}A]{[NV]|[RG]}P{I|L};[QA][Q{I|L}]{[NV]|[RG]}P{I|L};[QA]{[QN]|[E{I|L}]|[KN]}[{I|L}V]P{I|L} 3.3128;3.1192;3.0598 -;-;- 73 + 1 2.176 61844.0 1.0 3357 3459 6811 DOHH2_400M_050219_1,6818 DOHH2_400M_050219_1,6818,QAGRLQPL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6819 37.851 312.0 258780.0 25 0 18206.0 + 43334 WLTQKQTL 8 113 509.2887691620907 1016.5629853909816 2 509.2902709841728 MULTI CID FTMS 0 0 0 6811 200277.65625 0.4771830698156896 -1 0.1209030151367187 8 Unmodified _WLTQKQTL_ ENSG00000266412|ENST00000581486|NCOA4;nc|ENSG00000266412|Q13772-2|NCOA4;nc|ENSG00000266412|Q13772-3|NCOA4;nc|ENSG00000266412|Q13772-4|NCOA4 99.79894945604345 0.0905594070608299 1 W{I|L}TQKQT{I|L} 8 0 + 98.229 0.0 0.0 9.6629 9.6629 95.013 0.0 0.0 0.0 42.698335803145554 12.914930551903224 12.914930551903224 9.262137858390815 0 1.5669015600442575 2.0 1.805462187404089 0.6861818737241735 + + W{I|L}TQKQT{I|L};W{I|L}TQK[AG]T{I|L};W{I|L}T[AG]KQT{I|L};W{I|L}T[AG]K[AG]T{I|L};W{I|L}TQKRW;W{I|L}T[AG]KRW;[W{I|L}][VS]T{I|L}W{I|L};[W{I|L}][VS]{I|L}TW{I|L};[W{I|L}]T[VS]{I|L}W{I|L};[QT]KQT{I|L}W{I|L} 9.6629;8.7518;8.7518;7.846;7.3347;6.4168;5.501;5.4772;5.1057;5.0875 +;-;-;-;-;-;-;-;-;- + 2612 + 1 2.176 66729.2 1.0 3358 3459 6811 DOHH2_400M_050219_1,6819 DOHH2_400M_050219_1,6819,WLTQKQTL True True WLTQKQTL 37.851435 509.290270984173 2158909.25 6811.0 nc|ENSG00000266412|Q13772-3|NCOA4;;ENSG00000266412|ENST00000581486|NCOA4;;nc|ENSG00000266412|Q13772-4|NCOA4;;nc|ENSG00000266412|Q13772-2|NCOA4 7.73084036509196 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6820 37.859 439.0 271680.0 25 0 17434.0 -1 ESNFMQRCE 9 117 608.7416204997088 1215.4686880662175 2 608.7419311404228 MULTI CID FTMS 0 0 0 6811 176232.09375 0.621520070745869 -1 0.1209030151367187 9 Carbamidomethyl (C),Oxidation (M) _ESNFM(Oxidation (M))QRC(Carbamidomethyl (C))E_ ENSG00000181544|ENST00000650831|FANCB 24.020572477871973 0.2255576514309169 1 {[ES]|[DT]|[{I|L}C]}NVDNVV 8 -1 44.123 0.0 0.0 3.6301 0.0 0.0 0.0 356.0492013090993 356.0492013090993 28.88357838612023 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.6989700043360187 {[ES]|[DT]|[{I|L}C]}NVDNVV 3.6301 - 391 + 1 2.176 91610.4 1.0 3359 3459 6811 DOHH2_400M_050219_1,6820 DOHH2_400M_050219_1,6820,ESNFMQRCE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6821 37.865 312.0 241590.0 25 0 45354.0 + 18571 LAAPQAPRH 9 82 480.7723266263311 959.530100319462 2 480.7721740603447 MULTI CID FTMS 0 0 0 6811 168092.578125 1.0 0 0.0 10 Unmodified _LAAPQAPRH_ REV__ENST00000533293.1_1_14:24779443-24780712:+|nuORF 11.640296217721598 0.521594087909532 1 {I|L} 1 -1 11.42 0.0 0.0 1.1902 0.0 0.0 828.4353260048122 0.0 828.4353260048122 0.0 0.310739533744222 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1902 + + 33 + 1 2.176 64596.2 1.0 3360 3459 6811 DOHH2_400M_050219_1,6821 DOHH2_400M_050219_1,6821,LAAPQAPRH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6822 37.869 222.0 343250.0 25 0 13995.0 + 7873 ELLRKYVL 8 106 517.325693036317 1032.636833139434 2 517.3270751833916 MULTI CID FTMS 0 0 0 6811 165829.5 1.0 0 0.0 11 Unmodified _ELLRKYVL_ ENSG00000154727|ENST00000400075|GABPA;ENST00000419271.1_1_7:63353684-63354623:+|nuORF 54.773552608820026 0.1167943196628344 1 YV{I|L} 3 5 20.947 0.0 0.0 2.0285 0.0 0.0 639.4090443341812 0.0 639.4090443341812 0.0 10.567861257115874 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 + YV{I|L} 2.0285 + + 94 1 2.176 61197.1 1.0 3361 3459 6811 DOHH2_400M_050219_1,6822 DOHH2_400M_050219_1,6822,ELLRKYVL True True ELLRKYVL 37.869139 517.327075183392 539449.1875 6811.0 ENST00000419271.1_1_7:63353684-63354623:+|nuORF;;ENSG00000154727|ENST00000400075|GABPA 4.438332875569661 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6823 37.883 800.0 293180.0 25 0 67020.0 + 10671 FVRDMIREV 9 150 582.8136440860407 1163.6127352388812 2 582.8130981326103 MULTI CID FTMS 0 0 0 6811 149729.5625 0.7708070085122898 -1 0.1209030151367187 12 Unmodified _FVRDMIREV_ ENSG00000130255|ENST00000347512|RPL36 28.181266145913348 0.172619120047252 1 [{M(Oxidation (M))|F}V]RDM{I|L}REV 9 0 + 57.163 0.0 0.0 4.9125 4.9125 76.528 0.0 0.0 0.0 1.6373427585526912 40.70911423856934 1.6373427585526912 2.5134875797167666 0 0.5 0.6777807052660807 0.0 0.8252574989159953 + + [{M(Oxidation (M))|F}V]RDM{I|L}REV;[{M(Oxidation (M))|F}V]RDM{I|L}WVV;[{M(Oxidation (M))|F}V]RDM{I|L}[VG]EV;V{M(Oxidation (M))|F}RD[EP][RV]{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]RDM{I|L}{[DA]|[EG]}VV;V{M(Oxidation (M))|F}RD[K{I|L}]{[QC]|[C(Carbamidomethyl (C))A]}R;{NN|[MP]|[D{I|L}]|[EV]}P[WH]{I|L}REV;[VP]E[WH]{I|L}REV;V{M(Oxidation (M))|F}R{I|L}{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}R;V{M(Oxidation (M))|F}R{I|L}{[NV]|[RG]}[KC]W 4.9125;4.6965;4.1212;4.1023;3.9052;3.5135;2.77;2.6026;2.5664;2.2969 +;-;-;-;-;-;-;-;-;- + 584 1 2.176 177375.5 0.6800000071525574 3362 3459 6811 DOHH2_400M_050219_1,6823 DOHH2_400M_050219_1,6823,FVRDMIREV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6824 37.891 435.0 239480.0 25 0 26012.0 24428 MGLRAGPI 8 144 407.73449553909705 813.4544381449941 2 407.7339050173759 MULTI CID FTMS 0 0 0 6811 139992.671875 0.8699383758157677 -1 0.1209030151367187 13 Unmodified _MGLRAGPI_ ENST00000475030.5_2_16:2889871-2891732:-|nuORF;ENST00000506153.5_1_16:2889871-2891732:-|nuORF 14.581692164780916 0.6954967302934248 1 {[MG]|[TS]}[RP]Q{I|L}{I|L} 7 4 {[MG]|[TS]}[RP]Q{I|L} + + 13.495 0.97682 0.14315 1.659 1.659 48.653 0.0 0.0 0.0 0.0 -8.728721920568248 -8.728721920568248 0.0 0 0.0 0.0 0.0 0.0 {[MG]|[TS]}[RP]Q{I|L}{I|L} 1.659 - 73 + 1 2.176 83659.8 1.0 3363 3459 6811 DOHH2_400M_050219_1,6824 DOHH2_400M_050219_1,6824,MGLRAGPI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6825 37.897 274.0 359980.0 25 0 29999.0 + -1 SLREASLAV 9 128 473.2718278321516 472.2645513655516 1 473.2720825076103 MULTI CID FTMS 0 0 0 6811 140175.3125 0.4790485605880912 -1 0.1209030151367187 14 ENST00000273395.8_2_3:112931414-112931489:+|nuORF 1 AV 2 -1 17.959 0.0 0.0 3.8027 0.0 0.0 284.1482468995344 0.0 284.1482468995344 0.0 5.740312677277188 0.0 0.0 0 0.0 0.0 0.0 0.0 AV 3.8027 - 87 + 1 2.176 80297.9 1.0 3364 3459 6811 DOHH2_400M_050219_1,6825 DOHH2_400M_050219_1,6825, False False SLREASLAV 37.896935 473.27208250761 1399906.875 6811.0 ENST00000273395.8_2_3:112931414-112931489:+|nuORF -0.0821652114391326 2.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 6826 37.911 800.0 75612.0 25 0 10346.0 -1 0 73 881.912115665572 1761.8096783979438 2 881.9126464724541 MULTI CID FTMS 0 0 0 6811 78793.7109375 0.3828821133572456 6 -0.6421852111816406 15 1 [NP]{I|L}NW[HV]MAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 58.07 0.0 0.0 3.296 3.296 72.838 0.0 0.0 0.0 3.521825181113627 4.60730838531493 3.521825181113627 3.521825181113627 0 1.0 0.0 0.0 0.4247425010840047 [NP]{I|L}NW[HV]MAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNW[HV]MAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NW[HV]MAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NW[HV]MAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{[DA]|[EG]}[HV]MAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGW[HV]MAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNW[HV]MAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNW[HV]MAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{[DA]|[EG]}[HV]MAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PGGW[HV]MAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.296;3.0961;2.7834;2.7834;2.7834;2.7834;2.5835;2.5835;2.5835;2.5835 -;-;-;-;-;-;-;-;-;- 447 1 2.176 48033.4 0.4199999868869781 3365 3459 6811 DOHH2_400M_050219_1,6826 DOHH2_400M_050219_1,6826, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6827 37.917 349.0 199420.0 25 0 18640.0 -1 0 101 571.2964683635648 570.2891918969648 1 571.2958862185478 MULTI CID FTMS 0 0 0 6811 194986.15625 0.8109396507591207 -1 0.1209030151367187 16 1 Y 1 -1 13.495 0.0 0.0 2.3663 0.0 0.0 389.2148338420804 0.0 389.2148338420804 0.0 1.712113404111033 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.3663 - 16 + 1 2.176 62098.3 1.0 3366 3459 6811 DOHH2_400M_050219_1,6827 DOHH2_400M_050219_1,6827, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6828 37.921 200.0 213460.0 25 0 13158.0 + 38184 TPRHIIVRF 9 79 380.2332108836047 1137.6778032510142 3 380.5670349001884 MULTI CID FTMS 0 0 0 6811 132167.765625 0.021517504758368 4 -0.4567031860351562 17 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 6.1918466704503565 0.6985299363762377 1 T{M(Oxidation (M))|F} 2 7 20.969 0.0 0.0 1.8431 0.0 0.0 0.0 886.5394576948971 886.5394576948971 7.513487579716767 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T{M(Oxidation (M))|F} 1.8431 - 28 + 1 2.176 38666.2 1.0 3367 3459 6811 DOHH2_400M_050219_1,6828 DOHH2_400M_050219_1,6828,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 6830 37.926 67.0 616510.0 25 0 89769.0 + 40026 VGFIWTTGLL 10 71 369.5455146417594 1105.6147145254783 3 369.5450317263603 MULTI CID FTMS 0 0 0 6829 484378.875 0.0548679006743473 2 -0.2124252319335937 1 Unmodified _VGFIWTTGLL_ REV__ENSG00000162618|ENST00000370742|ADGRL4 7.289230182591677 0.6929195370588109 1 {I|L} 1 -1 14.604 0.0 0.0 1.3209 0.0 0.0 974.5199096932504 0.0 974.5199096932504 0.0 -3.5834938564822494 -3.5834938564822494 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3209 + + 70 + 1 2.176 40019.7 1.0 3368 3460 6829 DOHH2_400M_050219_1,6830 DOHH2_400M_050219_1,6830,VGFIWTTGLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6831 37.928 114.0 448840.0 25 0 24907.0 + 40787 VLLKARLVPA 10 92 360.58193029303135 1078.723961479294 3 360.5814086794853 MULTI CID FTMS 0 0 0 6829 247072.6875 0.0991402067107202 2 -0.2124252319335937 2 Unmodified _VLLKARLVPA_ ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B 16.565877749689598 0.5695826726197942 1 [DV]V{I|L}{I|L} 5 8 33.812 0.0 0.0 3.1345 0.0 0.0 0.0 536.3678682916624 536.3678682916624 22.39229802745962 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [DV]V{I|L}{I|L} 3.1345 - 29 + 1 2.176 49674.0 1.0 3369 3460 6829 DOHH2_400M_050219_1,6831 DOHH2_400M_050219_1,6831,VLLKARLVPA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6832 37.929 12.0 5539400.0 25 0 1063200.0 + 9839 MIEPRTLQY 9 66 575.7997754924628 1149.5849980517255 2 575.8002807497978 MULTI CID FTMS 0 0 0 6829 4356307.0 0.110785748239887 -2 0.2209434509277343 3 Unmodified _FPENKKQPY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 39.957323273325 0.0756908302845263 1 M{I|L}EY 4 7 61.67 0.0 0.0 5.3646 0.0 0.0 0.0 610.3307589166624 610.3307589166624 33.081597033474424 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3494850021680094 0.0 M{I|L}EY 5.3646 - 51 + 1 2.176 53663.3 1.0 3370 3460 6829 DOHH2_400M_050219_1,6832 DOHH2_400M_050219_1,6832,FPENKKQPY True False MIEPRTLQY 37.929451 575.800280749798 715150800.0 6829.0 ENSG00000105193|ENST00000251453|RPS16;;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 5.843675295511882 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6833 37.931 60.0 831000.0 25 0 59854.0 + 11268 GETSYIRVY 9 78 544.2747831699041 1086.5350134066082 2 544.2747680544853 MULTI CID FTMS 0 0 0 6829 736979.9375 0.4502228304774027 -1 0.1000404357910156 4 Unmodified _GETSYIRVY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 62.57269311338072 0.0246576765497938 1 {[DA]|[EG]}TSY{I|L}RVY 9 0 + 85.596 0.0 0.0 7.8779 7.8779 96.183 0.0 0.0 0.0 73.38939991961396 12.98332479720628 12.98332479720628 21.237125054200234 0 1.424742501084005 1.6989700043360187 0.4247425010840047 0.4247425010840047 + + {[DA]|[EG]}TSY{I|L}RVY;WTSY{I|L}[VG]VY;WTSY{I|L}[{I|L}T]{[CT]|[{M(Oxidation (M))|F}G]};WTSY{I|L}[Y{I|L}]AA;{[CT]|[{M(Oxidation (M))|F}G]}[W{M(Oxidation (M))|F}]{I|L}RVY 7.8779;5.9233;4.335;4.335;2.681 +;-;-;-;- + 99 + 1 2.176 42542.2 1.0 3371 3460 6829 DOHH2_400M_050219_1,6833 DOHH2_400M_050219_1,6833,GETSYIRVY True True GETSYIRVY 37.930953 544.274768054485 8469075.0 6829.0 ENST00000603963.1_1_12:120899824-120902572:-|nuORF;;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;;ENSG00000111786|ENST00000229390|SRSF9 5.957972526550293 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6834 37.934 137.0 635790.0 25 0 104180.0 + 43982 YIDEQFERY 9 70 631.7882606854622 1261.5619684377243 2 631.7884399294853 MULTI CID FTMS 0 0 0 6829 418593.3125 0.100396468654893 -1 0.1000404357910156 5 Unmodified _YIDEQFERY_ ENSG00000168385|ENST00000391971|SEPTIN2;ENST00000467971.5_1_2:242255375-242276932:+|nuORF;ENST00000484167.5_1_2:242276764-242276932:+|nuORF;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2 72.96794272382148 0.0199516581995792 1 Y{I|L}DEQ{M(Oxidation (M))|F}E[YR] 9 0 + 110.28 0.0 0.0 8.7418 8.7418 93.481 0.0 0.0 0.0 100.84167111982566 9.060508939769749 9.060508939769749 9.208187539523747 0 0.9247425010840048 2.0 1.110924374808178 1.2302046884880935 + + Y{I|L}DEQ{M(Oxidation (M))|F}E[YR];Y{I|L}DE[AG]{M(Oxidation (M))|F}E[YR];Y{I|L}D{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[YR];Y[{M(Oxidation (M))|F}V]E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[YR];[RH][MN]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[YR];[H{I|L}]SE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[MN]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 8.7418;8.0119;6.4775;1.5187;0.50963;0.0097766 +;-;-;-;-;- + 338 + 1 2.176 71042.9 1.0 3372 3460 6829 DOHH2_400M_050219_1,6834 DOHH2_400M_050219_1,6834,YIDEQFERY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6835 37.936 89.0 644500.0 25 0 80297.0 + 11174 GELPSERW 8 79 487.240944395441 972.467335857682 2 487.2407104372978 MULTI CID FTMS 0 0 0 6829 392889.15625 1.0 0 0.0 6 Unmodified _GELPSERW_ ENSG00000099804|ENST00000215574|CDC34;ENSG00000107341|ENST00000263228|UBE2R2;ENST00000586788.1_1_19:531880-536341:+|nuORF 24.020572477871973 0.5389365498350341 1 {[DA]|[EG]}{I|L}[YN]P 6 5 30.463 0.0 0.0 3.1325 0.0 0.0 0.0 296.12591817319577 296.12591817319577 17.36371556024956 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.3807196863200844 {[DA]|[EG]}{I|L}[YN]P 3.1325 - 79 1 2.176 51017.1 1.0 3373 3460 6829 DOHH2_400M_050219_1,6835 DOHH2_400M_050219_1,6835,GELPSERW False True GELPSERW 37.93569 487.240710437298 2013709.75 6829.0 ENSG00000099804|ENST00000215574|CDC34;;ENSG00000107341|ENST00000263228|UBE2R2;;ENST00000586788.1_1_19:531880-536341:+|nuORF 4.730714797973633 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6836 37.938 129.0 517090.0 25 0 52338.0 + 1285 AIQEHPVVL 9 105 503.2897877547607 1004.5650225763214 2 503.2895690798759 MULTI CID FTMS 0 0 0 6829 336942.53125 1.0 0 0.0 7 Unmodified _AIQEHPVVL_ ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT 56.17704186161178 0.0281986971544335 1 [{I|L}A][YR]{[DA]|[EG]}{I|L}A{I|L} 9 6 + 53.164 0.0 0.0 5.2923 5.2923 76.034 0.0 0.0 0.0 11.736571341540056 21.36931783443302 11.736571341540056 1.2937092834840769 0 0.75 2.0 0.3494850021680094 0.3807196863200844 [{I|L}A][YR]{[DA]|[EG]}{I|L}A{I|L};[{I|L}A][YR][DG]VV{I|L};[VP]V[HA][DG]VV{I|L};[VP]V[HA]{[DA]|[EG]}{I|L}A{I|L};[VP]H{[VA]|[{I|L}G]}[DG]VV{I|L};[VP]H{[VA]|[{I|L}G]}{[DA]|[EG]}{I|L}A{I|L};[VP]V[H{I|L}][DN]V{I|L};[TA]{[CT]|[{M(Oxidation (M))|F}G]}[{I|L}T]V{I|L}A{I|L};[VP]H[{I|L}V][DN]V{I|L} 5.2923;5.1635;2.7042;2.454;1.9672;1.717;1.579;1.3451;0.84204 -;-;-;-;-;-;-;-;- 248 1 2.176 55334.3 1.0 3374 3460 6829 DOHH2_400M_050219_1,6836 DOHH2_400M_050219_1,6836,AIQEHPVVL True True AIQEHPVVL 37.93832 503.289569079876 2008418.875 6829.0 ENSG00000116906|ENST00000366647|GNPAT;;nc|ENSG00000116906|O15228-2|GNPAT 6.60559097925822 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6837 37.941 131.0 410990.0 25 0 54696.0 41090 VNKDKGRP 8 93 457.2645569022711 912.5145608713422 2 457.2646667361259 MULTI CID FTMS 0 0 0 6829 262067.40625 0.4312129939432831 -3 0.3491592407226562 8 Unmodified _VNKDKGRP_ ENSG00000165138|ENST00000353234|ANKS6;nc|ENSG00000165138|Q68DC2-4|ANKS6 7.910154910731844 0.7763180056447161 1 {I|L} 1 8 10.089 0.0 0.0 1.1056 0.0 0.0 781.4198475918485 0.0 781.4198475918485 0.0 2.6413688858352184 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1056 - 35 + 1 2.176 47901.5 1.0 3375 3460 6829 DOHH2_400M_050219_1,6837 DOHH2_400M_050219_1,6837,VNKDKGRP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6838 37.945 213.0 314340.0 25 0 45841.0 26507 NVELDPEIQ 9 87 528.7655459223305 1055.5165389114609 2 528.7645141482353 MULTI CID FTMS 0 0 0 6829 228081.359375 0.255852429594343 -1 0.1000404357910156 9 Unmodified _NVELDPEIQ_ CON__Q32MB2;CON__Q3SY84;CON__Q6IME9;CON__Q6NXH9;CON__Q7RTS7;CON__Q9R0H5;ENSG00000139648|ENST00000267119|KRT71;ENSG00000170484|ENST00000305620|KRT74;ENSG00000186049|ENST00000305748|KRT73;nc|ENSG00000186049|Q86Y46-2|KRT73 38.61474834105838 0.0830609365873449 1 {[NV]|[RG]}E{I|L}DPE[Q{I|L}] 9 0 + 39.671 0.0 0.0 3.7584 3.7584 76.12 0.0 0.0 0.0 5.6424927368726046 3.996746844687927 3.996746844687927 5.740312677277188 0 0.3807196863200844 0.0 0.0 0.0 + + {[NV]|[RG]}E{I|L}DPE[Q{I|L}];[EP][KT]DPE[Q{I|L}];[EP]D[KT]PE[Q{I|L}];[PA]{[CA]|SS}{I|L}DPE[Q{I|L}];[EP]{I|L}S[SG]PE[Q{I|L}];{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}DPE[Q{I|L}];[EP]D{I|L}{[NV]|[RG]}E[Q{I|L}];[EP]{I|L}D{[NV]|[RG]}E[Q{I|L}];{[QN]|[E{I|L}]|[KN]}D{[NV]|[RG]}PE[Q{I|L}];[TP][SG]{I|L}DPE[Q{I|L}] 3.7584;3.2146;2.9294;2.845;2.7688;2.736;2.733;2.6158;2.5263;2.509 +;-;-;-;-;-;-;-;-;- + 373 1 2.176 57545.0 1.0 3376 3460 6829 DOHH2_400M_050219_1,6838 DOHH2_400M_050219_1,6838,NVELDPEIQ True True NVEIDPEIQ 37.945024 528.764514148235 5478326.0 6829.0 P04264;;ENSEMBL:ENSBTAP00000038253;;ENSG00000167768|ENST00000252244|KRT1;;Q8VED5 0.7843003471692404 2.0 False 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 6839 37.948 167.0 387010.0 25 0 29703.0 + 34709 SPWGKHVF 8 105 479.2493490163823 0 479.2502014040947 PEAK CID FTMS 0 0 0 6829 196625.78125 1.0 0 0.0 10 Unmodified _SPWGKHVF_ ENSG00000110108|ENST00000227525|TMEM109 24.67388899826682 0.3296343502680589 1 PW 2 6 13.271 0.0 0.0 1.3875 0.0 0.0 87.02928009278669 583.3008516900999 670.3301317828866 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + PW 1.3875 + + 97 + 1 2.176 57635.4 1.0 3377 3460 6829 DOHH2_400M_050219_1,6839 DOHH2_400M_050219_1,6839,SPWGKHVF False True SPWGKHVF 37.948284 479.250201404095 1525284.875 6829.0 ENSG00000110108|ENST00000227525|TMEM109 4.277228673299153 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6840 37.952 216.0 271670.0 25 0 18343.0 + 25408 NEAFGDTKF 9 109 514.7380546093914 1027.461556285583 2 514.7380859255791 MULTI CID FTMS 0 0 0 6829 194067.9375 0.4642037200737144 1 -0.1261940002441406 11 Unmodified _NEAFGDTKF_ ENSG00000130726|ENST00000253024|TRIM28;ENST00000598355.1_1_19:59061017-59061917:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28 34.93206674587334 0.1032771302489716 1 {[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}[DG]TK{M(Oxidation (M))|F} 9 0 + 38.874 0.0 0.0 3.7835 3.7835 77.285 0.0 0.0 0.0 5.6424927368726046 6.812412373755876 5.6424927368726046 6.812412373755876 0 1.0 0.0 0.0 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}[DG]TK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}[DG]T{M(Oxidation (M))|F}K;{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}{[SA]|[TG]}DK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}{[SA]|[TG]}D{M(Oxidation (M))|F}K;{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]K{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}K;{[QD]|[EN]|[WG]|[KD]|[RS]}A[RH]T[WD];{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}{[SA]|[TG]}{[QV]|[N{I|L}]|[RA]|[KV]}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}{[SA]|[TG]}[YN]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A[RH]T{M(Oxidation (M))|F}[PG] 3.7835;3.1205;3.0261;2.3631;1.7694;1.7694;1.3726;1.1609;1.1241;0.98952 +;-;-;-;-;-;-;-;-;- + 245 + 1 2.176 52870.1 1.0 3378 3460 6829 DOHH2_400M_050219_1,6840 DOHH2_400M_050219_1,6840,NEAFGDTKF True True NEAFGDTKF 37.952378 514.738085925579 2075221.0 6829.0 ENST00000598355.1_1_19:59061017-59061917:+|nuORF;;ENSG00000130726|ENST00000253024|TRIM28;;nc|ENSG00000130726|Q13263-2|TRIM28 7.134305159250896 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6841 37.957 245.0 277380.0 25 0 27861.0 + 13090 HEIEALKSF 9 100 537.2849834367308 1072.5554139402616 2 537.2850219607353 MULTI CID FTMS 0 0 0 6829 184013.96875 1.0 0 0.0 12 Unmodified _HEIEALKSF_ ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC 63.22749603027936 0.0242951379232427 1 {[YC]|[HE]}{I|L}EA{I|L}KS{M(Oxidation (M))|F} 9 0 + 50.028 0.0 0.0 4.6643 4.6643 74.329 0.0 0.0 0.0 1.62794683835358 18.802608810399622 1.62794683835358 1.62794683835358 0 1.1549471895720984 0.0 0.9604093769761876 0.0 + + {[YC]|[HE]}{I|L}EA{I|L}KS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}HEA{I|L}KS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AEH{I|L}KS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HA]H{I|L}KS{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}EH{I|L}KS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HHA{I|L}KS{M(Oxidation (M))|F};H[RD]{I|L}[NG]KS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{I|L}{[YC]|[HE]}KS{M(Oxidation (M))|F};[DV]{[HG]|PP}{I|L}[NG]KS{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}[TA]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F} 4.6643;4.5125;4.2782;3.2555;3.0766;3.0409;2.8292;2.5574;1.9707;1.9588 +;-;-;-;-;-;-;-;-;- + 352 1 2.176 54359.8 1.0 3379 3460 6829 DOHH2_400M_050219_1,6841 DOHH2_400M_050219_1,6841,HEIEALKSF True True HEIEALKSF 37.956953 537.285021960735 981279.5625 6829.0 nc|ENSG00000078618|O43847-2|NRDC;;ENSG00000078618|ENST00000352171|NRDC 6.231916586558024 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6842 37.971 800.0 145630.0 25 0 8950.2 + -1 YSDKYFDEHYEY 12 122 829.8367750489997 1657.6589971647993 2 829.8371459841728 MULTI CID FTMS 0 0 0 6829 141256.984375 1.0 0 0.0 13 2 Carbamidomethyl (C) _YMC(Carbamidomethyl (C))HRSYC(Carbamidomethyl (C))YRY_ ENSG00000123975|ENST00000314355|CKS2 4.897010918128616 0.8520435188433833 1 {[{M(Oxidation (M))|F}C]|[YS]}DKY{M(Oxidation (M))|F}DEHYEY 12 -1 + 110.69 0.0 0.0 6.6775 6.6775 81.173 0.0 0.0 0.0 0.8715017571889945 60.27896678825968 0.8715017571889945 1.61909140885804 0 3.5669015600442577 0.0 1.8169015600442573 0.0 {[{M(Oxidation (M))|F}C]|[YS]}DKY{M(Oxidation (M))|F}DEHYEY;{[QD]|[EN]|[WG]|[KD]|[RS]}SYY{M(Oxidation (M))|F}DEHYEY;{[QD]|[EN]|[WG]|[KD]|[RS]}YSY{M(Oxidation (M))|F}DEHYEY;{[{M(Oxidation (M))|F}C]|[YS]}DKY{M(Oxidation (M))|F}DEHEYY;Y{M(Oxidation (M))|F}YHED{M(Oxidation (M))|F}YKD[MT];{[QD]|[EN]|[WG]|[KD]|[RS]}SYY{M(Oxidation (M))|F}DEHEYY;{[QD]|[EN]|[WG]|[KD]|[RS]}YSY{M(Oxidation (M))|F}DEHEYY;Y{M(Oxidation (M))|F}YHED{M(Oxidation (M))|F}YSPQY;Y{M(Oxidation (M))|F}YHED{M(Oxidation (M))|F}YYS[QP];Y{M(Oxidation (M))|F}YHED{M(Oxidation (M))|F}YSY[QP] 6.6775;6.5798;6.4729;6.4136;6.3716;6.3159;6.2089;6.1189;6.0177;5.9108 -;-;-;-;-;-;-;-;-;- 12736 1 2.176 82887.1 0.6499999761581421 3380 3460 6829 DOHH2_400M_050219_1,6842 DOHH2_400M_050219_1,6842,YMCHRSYCYRY False False YSDKYFDEHYEY 37.970801 829.837145984173 673925.6875 6829.0 ENSG00000123975|ENST00000314355|CKS2 11.589465777079264 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6843 37.985 800.0 194570.0 25 0 9475.0 + -1 FRFWRCDCRWR 11 118 872.9078516899757 1743.8011504467513 2 872.9082519412041 MULTI CID FTMS 0 0 0 6829 130666.046875 1.0 0 0.0 14 2 Carbamidomethyl (C) _FRFWRC(Carbamidomethyl (C))DC(Carbamidomethyl (C))RWR_ REV__ENST00000602980.1_1_7:29725056-29725440:+|nuORF 0.0 0.8751479354844584 1 QAEN{I|L}NPDQ 9 -1 81.948 0.0 0.0 4.6994 0.0 0.0 716.3627796857437 0.0 716.3627796857437 0.0 64.28965350852792 0.0 0.0 0 1.6549471895720984 0.0 0.3807196863200844 0.4247425010840047 QAEN{I|L}NPDQ 4.6994 - 699 1 2.176 111022.6 0.6200000047683716 3381 3460 6829 DOHH2_400M_050219_1,6843 DOHH2_400M_050219_1,6843,FRFWRCDCRWR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6844 37.998 800.0 516380.0 25 0 50715.0 + 40789 VLLKARLVPA 10 213 540.3689072237219 1078.7232615142436 2 540.3686401247978 MULTI CID FTMS 0 0 0 6829 119674.046875 0.1161386555442456 2 -0.2124252319335937 15 Unmodified _VLLKARLVPA_ ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B 37.07464296494664 0.1884581770199685 1 {NN|[MP]|[D{I|L}]|[EV]}WGE{I|L}{I|L}A 8 7 47.048 0.0 0.0 4.3614 0.0 0.0 0.0 178.24448354473978 178.24448354473978 -6.951687839877891 0.0 -6.951687839877891 0.0 0 0.0 1.5228787452803376 1.41944517631652 0.0 {NN|[MP]|[D{I|L}]|[EV]}WGE{I|L}{I|L}A 4.3614 - 8383 1 2.176 309338.9 0.5899999737739563 3382 3460 6829 DOHH2_400M_050219_1,6844 DOHH2_400M_050219_1,6844,VLLKARLVPA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6845 38.011 637.0 172910.0 25 0 12313.0 + 28440 PTDGPPNSFY 10 155 547.7426796577605 1093.470806382321 2 547.7437621951103 MULTI CID FTMS 0 0 0 6829 91610.546875 0.8465446929235587 6 -0.5611686706542969 16 Unmodified _PTDGPPNSFY_ ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11 17.11289562659939 0.5604042439455784 1 [WY]P[YR]{M(Oxidation (M))|F}Y 7 7 + 29.309 0.0 0.0 2.6803 2.6803 72.13 0.0 0.0 0.0 6.777807052660805 4.149733479708182 4.149733479708182 4.149733479708182 0 0.7302046884880937 0.0 0.0 0.0 [WY]P[YR]{M(Oxidation (M))|F}Y;[WY]P[YR]Y{M(Oxidation (M))|F};EE[YT]RS{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{[C(Carbamidomethyl (C))G]|[NC]}RS{M(Oxidation (M))|F}Y;[YT]EERS{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q]RS{M(Oxidation (M))|F}Y;{[CT]|[{M(Oxidation (M))|F}G]}T{[C(Carbamidomethyl (C))G]|[NC]}RS{M(Oxidation (M))|F}Y;EE[YT][VG]S{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{[C(Carbamidomethyl (C))G]|[NC]}[VG]S{M(Oxidation (M))|F}Y;{[SA]|[TG]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}RS{M(Oxidation (M))|F}Y 2.6803;2.3008;1.4372;1.379;1.3067;1.2229;0.91221;0.59014;0.53687;0.48924 -;-;-;-;-;-;-;-;-;- 390 + 1 2.176 88012.4 1.0 3383 3460 6829 DOHH2_400M_050219_1,6845 DOHH2_400M_050219_1,6845,PTDGPPNSFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6846 38.025 800.0 32956.0 25 0 2535.2 24491 MIHRFWYNYRQ 11 54 807.3907958865166 0 807.3907958865166 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _MIHRFWYNYRQ_ ENSG00000171509|ENST00000307765|RXFP1;nc|ENSG00000171509|Q9HBX9-2|RXFP1;nc|ENSG00000171509|Q9HBX9-4|RXFP1;nc|ENSG00000171509|Q9HBX9-5|RXFP1 1.3295316138638542 0.4761840153648598 1 {I|L} 1 10 6.9897 0.0 0.0 0.43358 0.0 0.0 482.54607278508144 1013.446249865686 1495.9923226507676 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.43358 + + 7 + 1 2.176 27790.5 0.4900000095367431 3384 3460 6829 DOHH2_400M_050219_1,6846 DOHH2_400M_050219_1,6846,MIHRFWYNYRQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6847 38.029 238.0 317920.0 25 0 23598.0 + 32975 SEMDTSVKF 9 110 522.2390398237541 1042.463526714308 2 522.2386352419853 MULTI CID FTMS 0 0 0 6829 89070.796875 1.0 0 0.0 18 Unmodified _SEMDTSVKF_ ENSG00000138448|ENST00000261023|ITGAV;ENST00000460641.1_1_2:187529903-187532515:+|nuORF;nc|ENSG00000138448|P06756-2|ITGAV;nc|ENSG00000138448|P06756-3|ITGAV 29.84058131909904 0.1515068451768857 1 {[ES]|[DT]|[{I|L}C]}MDTSVK{M(Oxidation (M))|F} 9 0 + 32.315 0.0 0.0 3.0999 3.0999 73.497 0.0 0.0 0.0 19.840795224631066 12.252684618815096 12.252684618815096 4.736607226101562 0 0.6643943297944485 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}MDTSVK{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}MD{[WT]|[RM]}K{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}MDT[HK][VP] 3.0999;2.6455;0.48866 +;-;- + 162 + 1 2.176 62288.8 1.0 3385 3460 6829 DOHH2_400M_050219_1,6847 DOHH2_400M_050219_1,6847,SEMDTSVKF False True SEMDTSVKF 38.029371 522.238635241985 486914.65625 6829.0 ENSG00000138448|ENST00000261023|ITGAV;;nc|ENSG00000138448|P06756-3|ITGAV;;ENST00000460641.1_1_2:187529903-187532515:+|nuORF;;nc|ENSG00000138448|P06756-2|ITGAV 5.774753252665202 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6848 38.044 800.0 90286.0 25 0 5236.9 + 42411 VTEFEDIKSGY 11 113 644.3088020326552 1286.6030511321103 2 644.3100463747978 MULTI CID FTMS 0 0 0 6829 89867.390625 1.0 0 0.0 19 Unmodified _VTEFEDIKSGY_ ENSG00000119335|ENST00000322030|SET;ENSG00000230667|ENST00000596516|SETSIP;ENST00000437270.1_1_9:140535772-140535991:-|nuORF;ENST00000497538.1_1_3:155705188-155705881:+|nuORF;nc|ENSG00000119335|Q01105-3|SET;nc|ENSG00000119335|Q01105-4|SET;nc|ENSG00000119335|Q01105|SET;nc|ENSG00000230667|P0DME0-1|SETSIP 22.65808497894818 0.560183898709508 1 {[TV]|[{I|L}S]}K 3 8 18.333 0.0 0.0 1.4249 0.0 0.0 0.0 955.3653856870508 955.3653856870508 4.353415603609751 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3807196863200844 0.0 {[TV]|[{I|L}S]}K 1.4249 - 364 1 2.176 58900.7 0.4900000095367431 3386 3460 6829 DOHH2_400M_050219_1,6848 DOHH2_400M_050219_1,6848,VTEFEDIKSGY False True VTEFEDIKSGY 38.044379 644.310046374798 479181.09375 6829.0 ENST00000437270.1_1_9:140535772-140535991:-|nuORF;;ENSG00000119335|ENST00000322030|SET;;ENST00000497538.1_1_3:155705188-155705881:+|nuORF;;ENSG00000230667|ENST00000596516|SETSIP;;nc|ENSG00000119335|Q01105|SET;;nc|ENSG00000230667|P0DME0-1|SETSIP;;nc|ENSG00000119335|Q01105-4|SET;;nc|ENSG00000119335|Q01105-3|SET 4.285494685173035 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6849 38.047 150.0 521080.0 25 0 49319.0 + 39346 VAGAEPRR 8 120 428.24290051885913 854.4712481045183 2 428.2479736208916 MULTI CID FTMS 0 0 0 6829 162444.3125 0.6766637217365135 -1 0.1000404357910156 20 Unmodified _VAGAEPRR_ REV__ENST00000441788.6_1_19:3506381-3522955:+|nuORF 2.577480529830294 0.808687252328423 1 V 1 -1 10.278 0.0 0.0 1.2028 0.0 0.0 737.3921140486574 0.0 737.3921140486574 0.0 0.7446950650603323 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2028 + + 46 + 1 2.176 66617.1 1.0 3387 3460 6829 DOHH2_400M_050219_1,6849 DOHH2_400M_050219_1,6849,VAGAEPRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6851 38.052 33.0 1738400.0 25 0 685450.0 4735 DEEVFFQLS 9 59 557.2602239971421 1112.5058950610842 2 557.2606078982353 MULTI CID FTMS 0 0 0 6850 215373.828125 0.1175642028223477 2 -0.23046875 1 Unmodified _DEEVFFQLS_ ENSG00000158941|ENST00000308511|CCAR2;nc|ENSG00000158941|Q8N163-2|CCAR2 7.910154910731844 0.6385446671287552 1 Y 1 9 15.485 0.0 0.0 1.3919 0.0 0.0 931.431582782567 0.0 931.431582782567 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3919 - 21 + 1 2.164 50795.5 1.0 3388 3461 6850 DOHH2_400M_050219_1,6851 DOHH2_400M_050219_1,6851,DEEVFFQLS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6852 38.062 584.0 114060.0 25 0 6778.1 -1 YLFYCKNCRFY 11 98 788.8554966764539 1575.6964404197076 2 788.8556396365166 MULTI CID FTMS 0 0 0 6850 89742.1953125 0.0982304546638998 2 -0.23046875 2 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 10.073929032068715 0.8255972128077141 1 ANQQ[MT][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}Y 10 -1 52.923 0.0 0.0 3.3587 0.0 0.0 328.14291715637506 0.0 328.14291715637506 0.0 32.162702160798936 0.0 0.0 0 0.0 0.0 1.5994850021680094 0.805462187404089 ANQQ[MT][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}Y 3.3587 - 1085 + 1 2.164 50283.2 1.0 3389 3461 6850 DOHH2_400M_050219_1,6852 DOHH2_400M_050219_1,6852,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6853 38.063 20.0 3558300.0 25 0 959380.0 + 4812 DERLRINSL 9 50 558.312811278338 1114.611069623476 2 558.3121826052666 MULTI CID FTMS 0 0 0 6850 2847760.5 0.7992919440426131 -1 0.1261940002441406 3 Unmodified _DERLRINSL_ ENSG00000120333|ENST00000476371|MRPS14 19.361941925380144 0.3125782356748823 1 DER{I|L} 4 5 50.918 0.0 0.0 4.5682 0.0 0.0 0.0 598.3319185846311 598.3319185846311 29.948500216800937 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 + DER{I|L} 4.5682 + + 31 + 1 2.164 58883.8 1.0 3390 3461 6850 DOHH2_400M_050219_1,6853 DOHH2_400M_050219_1,6853,DERLRINSL False True DERLRINSL 38.063444 558.312182605267 18306174.0 6850.0 ENSG00000120333|ENST00000476371|MRPS14 5.715458710988362 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6854 38.065 34.0 2003500.0 25 0 246590.0 + 7217 EERADLIAY 9 74 540.2717969300464 1078.5290409268928 2 540.2724487185478 MULTI CID FTMS 0 0 0 6850 1493029.375 0.3859432002566355 -1 0.1261940002441406 4 Unmodified _EERADLIAY_ ENSG00000172115|ENST00000305786|CYCS 36.12702656103203 0.0967173616627612 1 {I|L}{I|L}AY 4 5 41.938 0.0 0.0 3.8885 0.0 0.0 600.2512115474491 0.0 600.2512115474491 0.0 21.0353127608304 0.0 0.0 0 1.0 0.0 0.0 0.0 + {I|L}{I|L}AY 3.8885 + + 67 1 2.164 58188.2 1.0 3391 3461 6850 DOHH2_400M_050219_1,6854 DOHH2_400M_050219_1,6854,EERADLIAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6855 38.066 78.0 979490.0 25 0 70993.0 + 454 AEFQRLPSY 9 81 555.7827975731427 1109.551042213085 2 555.7830688357353 MULTI CID FTMS 0 0 0 6850 832839.5 0.3934404196687732 -1 0.1261940002441406 5 Unmodified _AEFQRLPSY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 57.24910588100465 0.0276051374632116 1 {[CP]|[EA]}{M(Oxidation (M))|F}QR{I|L}PSY 9 0 + 76.609 0.0 0.0 6.9045 6.9045 90.615 0.0 0.0 0.0 46.61359110675761 14.09256854528806 14.09256854528806 9.208187539523747 0 2.274227503252014 0.0 1.305462187404089 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}QR{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}[AG]R{I|L}PSY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}REA{I|L}PSY;[PS]Y{[NV]|[RG]}A{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}{[NV]|[RG]}A{I|L}PSY;[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}{[CP]|[EA]}PSY;[PS]Y[R{I|L}]QPSY;{[CP]|[EA]}{M(Oxidation (M))|F}[R{I|L}]QPSY 6.9045;6.0746;4.9817;4.5617;4.4537;3.7329;3.2901;3.2223;3.2021;3.0942 +;-;-;-;-;-;-;-;-;- + 284 + 1 2.164 64136.8 1.0 3392 3461 6850 DOHH2_400M_050219_1,6855 DOHH2_400M_050219_1,6855,AEFQRLPSY True True AEFQRLPSY 38.066427 555.783068835735 30074552.0 6850.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 7.959296067555745 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6856 38.068 65.0 1146700.0 25 0 416060.0 + 7886 ELNERNSRGK 10 78 401.54772379996473 1201.6213420000945 3 401.5474426150322 MULTI CID FTMS 0 0 0 6850 523663.71875 1.0 0 0.0 6 Unmodified _ELNERNSRGK_ REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000461872.6_1_6:152697909-152949466:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-10|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-5|SYNE1;REV__nc|ENSG00000131018|Q8NF91-6|SYNE1;REV__nc|ENSG00000131018|Q8NF91-7|SYNE1;REV__SYNE1|p.A1982Sfs*14|1|0.3|ENSG00000131018|chr6:152416493-152416494|-/T|frameshift_variant 10.898955630103616 0.6646681216928481 1 E{I|L}{I|L} 3 -1 43.188 0.0 0.0 3.5941 0.0 0.0 0.0 843.3823610400655 843.3823610400655 32.61439372640169 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 E{I|L}{I|L} 3.5941 - 25 + 1 2.164 61110.0 1.0 3393 3461 6850 DOHH2_400M_050219_1,6856 DOHH2_400M_050219_1,6856,ELNERNSRGK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6857 38.07 107.0 688000.0 25 0 133690.0 + 31758 RSDTPLIY 8 64 482.75878281454095 963.503012695882 2 482.7585937380791 MULTI CID FTMS 0 0 0 6850 499991.03125 0.4017902336100545 -1 0.1261940002441406 7 Unmodified _RSDTPLIY_ ENSG00000196305|ENST00000443024|IARS1 25.399314129420983 0.5099049743284904 1 {M(Oxidation (M))|F}{I|L}Y 3 6 33.94 0.0 0.0 3.5226 0.0 0.0 522.3051805199038 0.0 522.3051805199038 0.0 22.5404627391503 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}Y 3.5226 - 47 + 1 2.164 60375.5 1.0 3394 3461 6850 DOHH2_400M_050219_1,6857 DOHH2_400M_050219_1,6857,RSDTPLIY False True RSDTPLIY 38.070252 482.758593738079 16182754.0 6850.0 ENSG00000196305|ENST00000443024|IARS1 5.973867416381836 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6858 38.073 124.0 407650.0 25 0 45351.0 + 42389 VTDSGPTFNY 10 83 550.7487204306667 1099.482887928133 2 550.7487060427666 MULTI CID FTMS 0 0 0 6850 436076.4375 0.3664541752066615 -1 0.1261940002441406 8 Unmodified _VTDSGPTFNY_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 52.268347100219714 0.0668375294751462 1 [TP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}W{M(Oxidation (M))|F}NY 8 5 [TP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}W + + 29.341 -1.6549 -0.25178 2.6686 2.6686 49.765 0.0 0.0 0.0 0.0 10.368931070804592 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.9247425010840048 [TP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}W{M(Oxidation (M))|F}NY 2.6686 - 209 + 1 2.164 45193.9 1.0 3395 3461 6850 DOHH2_400M_050219_1,6858 DOHH2_400M_050219_1,6858,VTDSGPTFNY True True VTDSGPTFNY 38.072823 550.748706042767 6722974.5 6850.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 6.460178375244141 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6859 38.075 129.0 652090.0 25 0 131380.0 + 1196 AIDNPLHY 8 100 471.7379992747355 941.461445616271 2 471.7376281619072 MULTI CID FTMS 0 0 0 6850 430350.96875 0.2607601374175867 -2 0.2262344360351562 9 Unmodified _AIDNPLHY_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 49.66892048692302 0.1408045912742846 1 [{I|L}A]DNP{I|L}HY 8 0 + 66.081 0.0 0.0 7.019 7.019 91.801 0.0 0.0 0.0 19.731975075880328 11.8943306386236 11.8943306386236 9.262137858390815 0 0.75 2.0 0.4247425010840047 0.0 + + [{I|L}A]DNP{I|L}HY;[{I|L}A]DGGP{I|L}HY;[{I|L}A]DNP{[WN]|[YH]}{I|L};[{I|L}A]DGGP{[WN]|[YH]}{I|L};[{I|L}A]YY{I|L}HY;[DN]P{I|L}HY[{I|L}A];[DN]{I|L}PHY[{I|L}A];{NN|[MP]|[D{I|L}]|[EV]}NPHY[{I|L}A];[{I|L}A]D[KC][QP][PA];{NN|[MP]|[D{I|L}]|[EV]}GGPHY[{I|L}A] 7.019;6.0352;4.9244;3.9406;3.8697;3.8242;3.1847;3.1006;2.7872;2.1168 +;-;-;-;-;-;-;-;-;- + 357 + 1 2.164 69952.4 1.0 3396 3461 6850 DOHH2_400M_050219_1,6859 DOHH2_400M_050219_1,6859,AIDNPLHY False True AIDNPLHY 38.07546 471.737628161907 24078382.0 6850.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 7.501361052195231 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6860 38.078 141.0 401290.0 25 0 21290.0 + 10443 FTEPNEISQY 10 87 614.2802785406915 1226.5460041481829 2 614.2803222537041 MULTI CID FTMS 0 0 0 6850 410082.0625 0.8585950542782584 -1 0.1261940002441406 10 Unmodified _FTEPNEISQY_ ENSG00000143155|ENST00000367833|TIPRL 49.55428908609986 0.0827668555218455 1 [NP]E[{M(Oxidation (M))|F}T]E{I|L}SQY 10 4 [NP]E[{M(Oxidation (M))|F}T]E{I|L} + + 27.652 11.079 1.3343 2.2544 2.2544 49.131 0.0 0.0 0.0 0.0 8.68944035183194 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 [NP]E[{M(Oxidation (M))|F}T]E{I|L}SQY 2.2544 - 378 + 1 2.164 48183.9 1.0 3397 3461 6850 DOHH2_400M_050219_1,6860 DOHH2_400M_050219_1,6860,FTEPNEISQY True True FTEPNEISQY 38.078312 614.280322253704 2905002.5 6850.0 ENSG00000143155|ENST00000367833|TIPRL 5.595500469207764 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6861 38.082 168.0 325690.0 25 0 39930.0 + 20465 LLKVNQEL 8 104 478.7924520192509 0 478.7924682497978 PEAK CID FTMS 0 0 0 6850 307073.15625 1.0 0 0.0 11 Unmodified _LLKVNQEL_ ENSG00000100347|ENST00000350028|SAMM50;ENST00000474323.5_1_22:44371844-44392260:+|nuORF 19.438996006549623 0.4285751805470146 1 {I|L} 1 7 6.9897 0.0 0.0 0.73147 0.0 0.0 757.3965057457299 82.06698023013905 839.4634859758689 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.73147 + + 41 + 1 2.164 44200.7 1.0 3398 3461 6850 DOHH2_400M_050219_1,6861 DOHH2_400M_050219_1,6861,LLKVNQEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6862 38.084 140.0 529710.0 25 0 48739.0 + + 892 AEEGGRSLW 9 96 502.7433996472018 1003.4722463612036 2 502.7427856326103 MULTI CID FTMS 0 0 0 6850 287613.375 0.5414395036909854 -1 0.1261940002441406 12 Unmodified _AEWLDGKW_ ENST00000204517.10_1_16:4322677-4322779:-|nuORF 26.88365393820708 0.4786498634179528 1 [MT]PG{M(Oxidation (M))|F} 5 -1 28.729 0.0 0.0 2.8629 0.0 0.0 0.0 467.2374666803344 467.2374666803344 10.94212497064703 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 [MT]PG{M(Oxidation (M))|F} 2.8629 - 82 + 1 2.164 61923.2 1.0 3399 3461 6850 DOHH2_400M_050219_1,6862 DOHH2_400M_050219_1,6862,AEWLDGKW False False AEEGGRSLW 38.08441 502.74278563261 3085961.5 6850.0 ENST00000204517.10_1_16:4322677-4322779:-|nuORF 1.264226645231247 2.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 6863 38.098 800.0 168880.0 25 0 20961.0 -1 EMYQELMEMCH 11 140 766.7783785076341 1531.542204082068 2 767.2800170779228 MULTI CID FTMS 0 0 0 6850 282072.0 0.995478917754771 1 -0.0862312316894531 13 Carbamidomethyl (C),2 Oxidation (M) _EMYQELM(Oxidation (M))EM(Oxidation (M))C(Carbamidomethyl (C))H_ ENSG00000144010|ENST00000639673|TRIM43B;ENSG00000144015|ENST00000272395|TRIM43 1.3295316138638542 0.8688751186870782 1 [NP]SND{M(Oxidation (M))|F}N{M(Oxidation (M))|F} 8 -1 41.04 0.0 0.0 2.6797 0.0 0.0 0.0 593.1706818349743 593.1706818349743 8.658195092046611 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.0044321917401078 1.2225210342440516 [NP]SND{M(Oxidation (M))|F}N{M(Oxidation (M))|F} 2.6797 - 1619 1 2.164 97903.9 0.959999978542328 3400 3461 6850 DOHH2_400M_050219_1,6863 DOHH2_400M_050219_1,6863,EMYQELMEMCH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6864 38.106 417.0 240230.0 25 0 36714.0 41589 VPPKVTTT 8 137 421.7516385099368 841.4887240866735 2 421.7512084841728 MULTI CID FTMS 0 0 0 6850 274330.09375 0.5341500351787466 4 -0.4159507751464844 14 Unmodified _VPPKVTTT_ ENSG00000113249|ENST00000523175|HAVCR1 2.577480529830294 0.808687252328423 1 {I|L} 1 8 8.9794 0.0 0.0 1.0671 0.0 0.0 710.3937208901876 0.0 710.3937208901876 0.0 8.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0671 - 6 + 1 2.164 81828.6 1.0 3401 3461 6850 DOHH2_400M_050219_1,6864 DOHH2_400M_050219_1,6864,VPPKVTTT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6865 38.109 165.0 420820.0 25 0 42974.0 23986 LVVDQKVYI 9 122 359.5499664740239 1075.6280700222717 3 359.5496093630791 MULTI CID FTMS 0 0 0 6850 222099.640625 1.0 0 0.0 15 Unmodified _LVVDQKVYI_ ENSG00000174898|ENST00000381624|CATSPERD 8.155526934196011 0.6299788542272896 1 {I|L} 1 8 13.979 0.0 0.0 1.2996 0.0 0.0 944.5329905318404 0.0 944.5329905318404 0.0 -5.484550065040281 -5.484550065040281 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2996 + + 59 + 1 2.164 62956.6 1.0 3402 3461 6850 DOHH2_400M_050219_1,6865 DOHH2_400M_050219_1,6865,LVVDQKVYI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6866 38.113 208.0 347960.0 25 0 54203.0 + 43912 YGFEKPSAI 9 105 506.2600351898011 0 506.2604247927666 PEAK CID FTMS 0 0 0 6850 212392.03125 0.8144820212058724 -1 0.1261940002441406 16 Unmodified _YGFEKPSAI_ ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465222.1_1_3:186502277-186502505:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENST00000467585.1_1_3:186502182-186503751:+|nuORF;ENST00000485101.5_1_3:186501384-186502505:+|nuORF;ENST00000486805.5_1_3:186501384-186502505:+|nuORF;ENST00000575957.1_1_17:78115565-78120760:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584054.5_1_17:7476159-7478064:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1 31.26834338654808 0.1046433560557175 1 G{M(Oxidation (M))|F}EK 4 5 23.928 0.0 0.0 2.3679 0.0 0.0 163.05725538758082 383.19452844791255 546.2517838354934 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + G{M(Oxidation (M))|F}EK 2.3679 + + 51 + 1 2.164 66727.7 1.0 3403 3461 6850 DOHH2_400M_050219_1,6866 DOHH2_400M_050219_1,6866,YGFEKPSAI True True YGFEKPSAI 38.112868 506.260424792767 1616107.0 6850.0 ENST00000584054.5_1_17:7476159-7478064:+|nuORF;;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;;ENST00000467585.1_1_3:186502182-186503751:+|nuORF;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;ENSG00000141543|ENST00000649764|EIF4A3;;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;;ENST00000485101.5_1_3:186501384-186502505:+|nuORF;;nc|ENSG00000156976|Q14240-2|EIF4A2;;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;;ENSG00000156976|ENST00000323963|EIF4A2;;ENST00000465222.1_1_3:186502277-186502505:+|nuORF;;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;;ENST00000575957.1_1_17:78115565-78120760:-|nuORF;;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENST00000486805.5_1_3:186501384-186502505:+|nuORF 7.07794205347697 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6867 38.119 293.0 178800.0 25 0 18783.0 + -1 CCYYQLRCYCL 11 79 553.559937310346 1657.6579825312378 3 553.5596801638603 MULTI CID FTMS 0 0 0 6850 208201.71875 0.5032351535374214 1 -0.0862312316894531 17 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))YYQLRC(Carbamidomethyl (C))YC(Carbamidomethyl (C))L_ REV__ENSG00000143340|ENST00000341785|FAM163A;REV__ENSG00000196990|ENST00000673969|FAM163B 0.5059551277355931 0.8727608062196215 1 Y 1 -1 14.604 0.0 0.0 0.88101 0.0 0.0 1476.583777064244 0.0 1476.583777064244 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.88101 + + 109 + 1 2.164 46641.4 1.0 3404 3461 6850 DOHH2_400M_050219_1,6867 DOHH2_400M_050219_1,6867,CCYYQLRCYCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6868 38.126 387.0 349660.0 25 0 73874.0 + 7888 ELNERWRSL 9 117 601.8189620035299 1201.6233710738595 2 601.8180419802666 MULTI CID FTMS 0 0 0 6850 188209.671875 1.0 0 0.0 18 Unmodified _ELNERWRSL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 31.635753872319068 0.1286659907112723 1 {I|L}YPN[PG]WRS{I|L} 10 5 + 52.59 0.0 0.0 4.3766 4.3766 54.427 0.0 0.0 0.0 37.96392871694554 9.70454762058324 9.70454762058324 0.0 0 0.9604093769761876 1.6989700043360187 0.7614393726401688 0.0 {I|L}YPN[PG]WRS{I|L};{I|L}YPE{I|L}[DP]RS{I|L};{I|L}YP[HM]WRS{I|L};{I|L}YPNK[DP]RS{I|L};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}{[VA]|[{I|L}G]}ENQ{I|L};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}[KG]NNQ{I|L};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}[W{I|L}]NQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NE{I|L}[DP]RS{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NN[PG]WRS{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NNK[DP]RS{I|L} 4.3766;4.3766;4.334;4.1261;3.5464;3.2959;3.2533;2.8704;2.8704;2.6198 -;-;-;-;-;-;-;-;-;- 320 + 1 2.164 99038.6 1.0 3405 3461 6850 DOHH2_400M_050219_1,6868 DOHH2_400M_050219_1,6868,ELNERWRSL False True ELNERWRSL 38.126371 601.818041980267 3761511.875 6850.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 5.431601524353027 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6869 38.131 241.0 298740.0 25 0 21309.0 + 7541 EIEQKVVAL 9 114 514.802836912603 1027.5911208920058 2 514.8030883669853 MULTI CID FTMS 0 0 0 6850 137681.125 0.5846871881554355 -1 0.1261940002441406 19 Unmodified _EIEQKVVAL_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;ENST00000489156.1_1_6:152599163-152623219:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1 46.020951573049366 0.0490941689151868 1 {[QN]|[E{I|L}]|[KN]}{I|L}EVA{I|L}E{I|L} 9 6 + 48.285 0.0 0.0 4.6988 4.6988 86.46 0.0 0.0 0.0 17.56121637950507 7.134928107446186 7.134928107446186 17.56121637950507 0 0.7429928190999391 2.0 1.5994850021680094 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}EVA{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}EQ[R{I|L}]K{I|L};[{I|L}T][RN]VA{I|L}E{I|L};[AG]KVEVA{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}T[TP]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[W{I|L}]{I|L}E{I|L};[KQ]VEVA{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}E[AG][R{I|L}]K{I|L};{[QN]|[E{I|L}]|[KN]}EQ[R{I|L}]{I|L}K;[AG]DK{I|L}VA{I|L}E{I|L} 4.6988;2.9899;2.6124;2.5043;2.462;2.2959;2.1444;2.0885;1.8899;1.8225 -;-;-;-;-;-;-;-;-;- 451 1 2.164 60534.7 1.0 3406 3461 6850 DOHH2_400M_050219_1,6869 DOHH2_400M_050219_1,6869,EIEQKVVAL True True EIEQKVVAL 38.130889 514.803088366985 1442792.625 6850.0 nc|ENSG00000131018|Q8NF91-2|SYNE1;;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;;nc|ENSG00000131018|Q8NF91-4|SYNE1;;ENSG00000131018|ENST00000367255|SYNE1;;nc|ENSG00000131018|Q8NF91-8|SYNE1;;ENST00000489156.1_1_6:152599163-152623219:-|nuORF 4.735793987909953 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6870 38.134 142.0 423260.0 25 0 26523.0 + 2547 ASELKALGY 9 97 476.26119295573824 950.5078329782764 2 476.2617980837822 MULTI CID FTMS 0 0 0 6850 131980.328125 0.27029221766221 -1 0.1261940002441406 20 Unmodified _ASELKALGY_ ENSG00000176102|ENST00000323959|CSTF3 52.268347100219714 0.0353964759249114 1 {[WT]|[RM]}{I|L}RRGY 7 6 + 32.491 0.0 0.0 3.4183 3.4183 83.784 0.0 0.0 0.0 9.788107009300616 0.2958980860662947 0.2958980860662947 32.49114457050446 0 0.3494850021680094 0.0 0.0 0.0 {[WT]|[RM]}{I|L}RRGY 3.4183 - 170 + 1 2.164 51207.9 1.0 3407 3461 6850 DOHH2_400M_050219_1,6870 DOHH2_400M_050219_1,6870,ASELKALGY True True ASELKALGY 38.133733 476.261798083782 2561072.5 6850.0 ENSG00000176102|ENST00000323959|CSTF3 4.912235736846924 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6872 38.14 118.0 531050.0 25 0 95174.0 + 10930 GAKRHSGL 8 88 413.2388644783535 824.463176023507 2 413.2386962771416 MULTI CID FTMS 0 0 0 6871 425587.25 0.3202164911919016 5 -0.4482269287109375 1 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 5.230669730166228 0.792582437072536 1 R 1 -1 0.9691 0.0 0.0 0.11754 0.0 0.0 430.2151119139351 235.1194246881469 665.334536602082 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.11754 + + 7 + 1 2.147 56044.3 1.0 3408 3462 6871 DOHH2_400M_050219_1,6872 DOHH2_400M_050219_1,6872,GAKRHSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6873 38.141 67.0 783610.0 25 0 151320.0 28044 PPAGRKFP 8 86 435.2515280440389 868.4885031548779 2 435.2512084841728 MULTI CID FTMS 0 0 0 6871 832209.9375 0.5843182000096894 -7 0.7439079284667969 2 Unmodified _PPAGRKFP_ ENST00000291232.4_2_22:42318247-42318586:-|nuORF 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.147 50256.2 1.0 3409 3462 6871 DOHH2_400M_050219_1,6873 DOHH2_400M_050219_1,6873,PPAGRKFP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6874 38.143 97.0 775950.0 25 0 102930.0 + 4937 DGLVKVQV 8 102 429.2586233052793 856.5026936773586 2 429.2581664919853 MULTI CID FTMS 0 0 0 6871 528341.8125 1.0 0 0.0 3 Unmodified _DGLVKVQV_ ENSG00000137100|ENST00000259632|DCTN3;nc|ENSG00000137100|O75935-2|DCTN3;nc|ENSG00000137100|O75935-3|DCTN3 85.35673624503755 0.0684052510377227 1 [DG]{I|L}VKVQV 8 0 [DG]{I|L} + + 44.189 18.996 6.6623 5.1592 5.1592 57.12 0.0 0.0 0.0 0.0 25.19245281301863 0.0 0.0 0 1.174742501084005 0.0 0.0 1.2544321917401078 + + [DG]{I|L}VKVQV 5.1592 + + 203 + 1 2.147 63852.5 1.0 3410 3462 6871 DOHH2_400M_050219_1,6874 DOHH2_400M_050219_1,6874,DGLVKVQV True True DGLVKVQV 38.143356 429.258166491985 3142301.25 6871.0 ENSG00000137100|ENST00000259632|DCTN3;;nc|ENSG00000137100|O75935-2|DCTN3;;nc|ENSG00000137100|O75935-3|DCTN3 5.509730974833171 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6875 38.157 800.0 250310.0 25 0 29740.0 + 15050 ILYNIKQEY 9 163 592.3214293271818 1182.6283057211635 2 592.3213378787041 MULTI CID FTMS 0 0 0 6871 238165.75 1.0 0 0.0 4 Unmodified _ILYNIKQEY_ ENSG00000135334|ENST00000257787|AKIRIN2 99.7552728972412 0.0110101799492648 1 {I|L}{I|L}YN{I|L}K[YE]Q 9 2 + 83.343 0.0 0.0 7.0473 7.0473 85.258 0.0 0.0 0.0 19.57756695356992 3.9080654136379422 3.9080654136379422 3.9080654136379422 0 1.4876954943324543 2.0 1.5356668758921828 0.4247425010840047 {I|L}{I|L}YN{I|L}K[YE]Q;{I|L}{I|L}Y{M(Oxidation (M))|F}QK{[ES]|[DT]|[{I|L}C]}R;{I|L}{I|L}YGG{I|L}K[YE]Q;{I|L}{I|L}Y{M(Oxidation (M))|F}QKAA{[ET]|[MV]};{I|L}{I|L}Y{M(Oxidation (M))|F}[AG]K{[ES]|[DT]|[{I|L}C]}R;{I|L}{I|L}Y{M(Oxidation (M))|F}[AG]KAA{[ET]|[MV]};{I|L}{I|L}Y{M(Oxidation (M))|F}{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}W;{I|L}{I|L}[TP][HC]K{I|L}MQ;{I|L}{I|L}Y{M(Oxidation (M))|F}{I|L}{I|L}[DG]{[ET]|[MV]};{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L}{I|L}EY 7.0473;6.7168;6.2687;6.0678;5.9382;5.2929;5.0336;4.493;4.3534;4.3336 -;-;-;-;-;-;-;-;-;- 3847 + 1 2.147 146846.5 0.949999988079071 3411 3462 6871 DOHH2_400M_050219_1,6875 DOHH2_400M_050219_1,6875,ILYNIKQEY True True ILYNIKQEY 38.157202 592.321337878704 1562368.625 6871.0 ENSG00000135334|ENST00000257787|AKIRIN2 6.575048128763835 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6876 38.163 290.0 226790.0 25 0 21412.0 + 466 AEFTKSIAKF 10 101 571.3169593218156 1140.619365710431 2 571.3172485232353 MULTI CID FTMS 0 0 0 6871 131452.125 1.0 0 0.0 5 Unmodified _AEFTKSIAKF_ ENSG00000118363|ENST00000263672|SPCS2 44.20668130422581 0.1141529893053425 1 AE{M(Oxidation (M))|F}TKS[{I|L}A]K{M(Oxidation (M))|F} 10 0 + 92.133 0.0 0.0 8.0774 8.0774 97.307 0.0 0.0 0.0 58.17532531436136 12.01667520279372 12.01667520279372 31.81872208767465 0 2.20597718523608 1.5228787452803376 0.4247425010840047 0.3252574989159953 + + AE{M(Oxidation (M))|F}TKS[{I|L}A]K{M(Oxidation (M))|F};AE{M(Oxidation (M))|F}[K{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}K{M(Oxidation (M))|F};{M(Oxidation (M))|F}{[CP]|[EA]}TKS[{I|L}A]K{M(Oxidation (M))|F};[KA]{[TV]|[{I|L}S]}TK{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}E;[KA]{[TV]|[{I|L}S]}T{M(Oxidation (M))|F}K{[MS]|[{M(Oxidation (M))|F}A]}E;[KT]{[VA]|[{I|L}G]}TK{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}E;[KG][{I|L}T]TK{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}E;[KT]{[VA]|[{I|L}G]}T{M(Oxidation (M))|F}K{[MS]|[{M(Oxidation (M))|F}A]}E;[KG][{I|L}T]T{M(Oxidation (M))|F}K{[MS]|[{M(Oxidation (M))|F}A]}E;[RH][WP]S[{I|L}A]K{M(Oxidation (M))|F} 8.0774;5.2878;4.924;2.1825;2.0494;1.988;1.8599;1.8549;1.7268;1.3884 +;-;-;-;-;-;-;-;-;- + 476 + 1 2.147 55320.5 1.0 3412 3462 6871 DOHH2_400M_050219_1,6876 DOHH2_400M_050219_1,6876,AEFTKSIAKF True True AEFTKSIAKF 38.162533 571.317248523235 695161.1875 6871.0 ENSG00000118363|ENST00000263672|SPCS2 5.782802581787109 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6877 38.176 800.0 164600.0 25 0 12712.0 + 13741 HRGPVLSL 8 144 439.7639451676207 877.5133374020413 2 439.7638122439384 MULTI CID FTMS 0 0 0 6871 136768.53125 1.0 0 0.0 6 Unmodified _HRGPVLSL_ ENSG00000135801|ENST00000258281|TAF5L 28.486842064014134 0.4448922141344407 1 {I|L}S{I|L} 3 5 39.253 0.0 0.0 4.4732 0.0 0.0 546.3034714176742 0.0 546.3034714176742 0.0 27.46977283935577 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 + {I|L}S{I|L} 4.4732 + + 106 1 2.147 104612.2 0.5899999737739563 3413 3462 6871 DOHH2_400M_050219_1,6877 DOHH2_400M_050219_1,6877,HRGPVLSL False True HRGPVLSL 38.17635 439.763812243938 730566.25 6871.0 ENSG00000135801|ENST00000258281|TAF5L 3.641085465749105 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6878 38.19 800.0 124690.0 25 0 23466.0 -1 LTVGNNTCFY 10 110 594.7732040674931 1187.531855201786 2 594.7734863162041 MULTI CID FTMS 0 0 0 6871 95942.1484375 1.0 0 0.0 7 Carbamidomethyl (C) _LTVGNNTC(Carbamidomethyl (C))FY_ ENSG00000116199|ENST00000263733|FAM20B 7.289230182591677 0.6929195370588109 1 Y 1 -1 15.485 0.0 0.0 1.3039 0.0 0.0 1006.457298782644 0.0 1006.457298782644 0.0 8.037275116073344 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3039 + + 102 + 1 2.147 78838.4 0.6399999856948853 3414 3462 6871 DOHH2_400M_050219_1,6878 DOHH2_400M_050219_1,6878,LTVGNNTCFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6879 38.195 232.0 592580.0 25 0 99585.0 20958 LNKKDLLAE 9 119 522.308981329348 1042.6034097254958 2 522.3078491091728 MULTI CID FTMS 0 0 0 6871 81799.921875 0.1521864497418537 -1 0.0862312316894531 8 Unmodified _LNKKDLLAE_ ENSG00000128266|ENST00000615612|GNAZ 13.042465956692816 0.4836390050082244 1 AQSVSNK 7 9 24.892 0.0 0.0 2.3875 0.0 0.0 310.2245777936583 0.0 310.2245777936583 0.0 3.922904052276557 0.0 0.0 0 0.0 0.0 0.0 0.8807196863200843 AQSVSNK 2.3875 - 372 + 1 2.147 111923.3 1.0 3415 3462 6871 DOHH2_400M_050219_1,6879 DOHH2_400M_050219_1,6879,LNKKDLLAE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6880 38.196 37.0 1126000.0 25 0 93210.0 -1 EVCLSCRRP 9 66 560.2729339501351 1118.53131496707 2 560.2725097537041 MULTI CID FTMS 0 0 0 6871 743029.0 0.94972410505098 1 -0.1442375183105468 9 Carbamidomethyl (C) _EVC(Carbamidomethyl (C))LSCRRP_ ENST00000502622.1_1_11:113851793-113853927:+|nuORF 11.640296217721598 0.521594087909532 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}RP 10 -1 + 61.669 0.0 0.0 5.5134 5.5134 76.289 0.0 0.0 0.0 27.269987279362624 0.7918124604762511 0.7918124604762511 0.7918124604762511 0 0.0 2.0 0.0 0.3252574989159953 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTGG{[VA]|[{I|L}G]}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTGG{[VA]|[{I|L}G]}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{[NV]|[RG]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{[NV]|[RG]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{[NV]|[RG]}RRCP;{[MG]|[TS]}[WR]{[NV]|[RG]}M[EP] 5.5134;5.4426;4.694;4.6233;3.0956;3.0248;1.8089;0.27503 -;-;-;-;-;-;-;- 149 + 1 2.147 37839.7 1.0 3416 3462 6871 DOHH2_400M_050219_1,6880 DOHH2_400M_050219_1,6880,EVCLSCRRP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6881 38.201 214.0 371340.0 25 0 54868.0 + 39240 VAAFAALT 8 116 382.2209002024662 762.4272474717325 2 382.2198669314384 MULTI CID FTMS 0 0 0 6871 240205.953125 0.7216486216734634 -1 0.0862312316894531 10 Unmodified _VAAFAALT_ REV__ENSG00000117600|ENST00000370185|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-3|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5|PLPPR4 0.0 0.8243325171867699 1 Y 1 -1 10.181 0.0 0.0 1.3353 0.0 0.0 581.3534692508325 0.0 581.3534692508325 0.0 0.5769670935103477 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3353 - 6 + 1 2.147 68426.0 1.0 3417 3462 6871 DOHH2_400M_050219_1,6881 DOHH2_400M_050219_1,6881,VAAFAALT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6882 38.215 800.0 45386.0 25 0 8805.3 -1 0 42 1142.468159275202 3424.382648425806 3 1142.801074206829 MULTI CID FTMS 0 0 0 6871 181222.4375 0.5678483167884821 1 -0.1442375183105468 11 1 Q 1 -1 6.9897 0.0 0.0 0.20412 0.0 0.0 2459.881563076 833.3977144830686 3293.2792775590688 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.20412 - 6 + 1 2.147 37644.3 0.5 3418 3462 6871 DOHH2_400M_050219_1,6882 DOHH2_400M_050219_1,6882, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6883 38.22 283.0 246260.0 25 0 28947.0 + 21391 LPFVVAVW 8 92 465.7777938128479 0 465.7780029177666 PEAK CID FTMS 0 0 0 6871 174914.8125 0.8362264800405708 -5 0.56158447265625 12 Unmodified _LPFVVAVW_ REV__ENSG00000154478|ENST00000284674|GPR26 6.354104778181461 0.5763711549229614 1 P{M(Oxidation (M))|F} 2 -1 10.969 0.0 0.0 1.1801 0.0 0.0 100.02466704482988 582.3745821588499 682.3992492036798 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F} 1.1801 + + 4 + 1 2.147 59713.5 1.0 3419 3462 6871 DOHH2_400M_050219_1,6883 DOHH2_400M_050219_1,6883,LPFVVAVW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6884 38.227 371.0 641920.0 25 0 125860.0 -1 KMMRVAEY 8 148 522.2532526490538 1042.4919523649075 2 522.2538940310478 MULTI CID FTMS 0 0 0 6871 152465.0 1.0 0 0.0 13 Oxidation (M) _KM(Oxidation (M))MRVAEY_ ENST00000552687.6_1_12:56332455-56333318:+|nuORF 18.13498045792455 0.6430038125133779 1 [Y{M(Oxidation (M))|F}]AQSVSNK 9 -1 + 57.744 0.0 0.0 5.5391 5.5391 86.324 0.0 0.0 0.0 43.38632334287368 7.090119426301591 7.090119426301591 9.208187539523747 0 0.8494850021680094 1.6989700043360187 0.3494850021680094 0.5 [Y{M(Oxidation (M))|F}]AQSVSNK;[Y{M(Oxidation (M))|F}]A[AG]SVSNK;[Y{M(Oxidation (M))|F}]AQSVSGGK;[{M(Oxidation (M))|F}V]TVSQAEY;[Y{M(Oxidation (M))|F}]A[WK]SNK;[Y{M(Oxidation (M))|F}]A{[SA]|[TG]}GVSNK;[Y{M(Oxidation (M))|F}]A{[SA]|[TG]}RSNK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVSQAEY;[Y{M(Oxidation (M))|F}]A[AG]SVSGGK;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VSQAEY 5.5391;4.6558;4.6558;4.306;4.2741;4.0783;4.0292;3.8009;3.7767;3.4815 -;-;-;-;-;-;-;-;-;- 764 + 1 2.147 184465.8 1.0 3420 3462 6871 DOHH2_400M_050219_1,6884 DOHH2_400M_050219_1,6884,KMMRVAEY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6885 38.241 800.0 86787.0 25 0 18934.0 -1 0 47 1137.776110558984 3410.3065022771525 3 1138.109790027142 MULTI CID FTMS 0 0 0 6871 75325.3125 0.6103942203726962 1 -0.1442375183105468 14 1 W 1 -1 4.6041 0.0 0.0 0.13501 0.0 0.0 2260.7193254660697 960.4824528756254 3221.201778341695 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.13501 - 4 + 1 2.147 56500.9 0.4000000059604645 3421 3462 6871 DOHH2_400M_050219_1,6885 DOHH2_400M_050219_1,6885, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6886 38.247 267.0 435470.0 25 0 31115.0 + 36843 TELPGQGESF 10 134 532.7489927922671 0 532.7487060427666 PEAK CID FTMS 0 0 0 6871 95524.4921875 1.0 0 0.0 15 Unmodified _TELPGQGESF_ ENSG00000129810|ENST00000412997|SGO1;nc|ENSG00000129810|Q5FBB7-2|SGO1;nc|ENSG00000129810|Q5FBB7-3|SGO1;nc|ENSG00000129810|Q5FBB7-4|SGO1;nc|ENSG00000129810|Q5FBB7-5|SGO1;nc|ENSG00000129810|Q5FBB7-7|SGO1;nc|ENSG00000129810|Q5FBB7|SGO1 18.1463463914782 0.3130158145628772 1 K{I|L}[WR]S 5 8 21.937 0.0 0.0 2.0627 0.0 0.0 228.00069935496828 162.0565127008422 390.0572120558105 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8609243748081781 0.3494850021680094 K{I|L}[WR]S 2.0627 - 254 + 1 2.147 98682.8 1.0 3422 3462 6871 DOHH2_400M_050219_1,6886 DOHH2_400M_050219_1,6886,TELPGQGESF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6887 38.261 800.0 77259.0 25 0 5453.6 -1 0 71 758.3645117061749 3029.4289409583 4 758.8650390505791 MULTI CID FTMS 0 0 0 6871 90651.421875 1.0 0 0.0 16 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E 3 -1 14.27 0.0 0.0 0.47104 0.0 0.0 0.0 2653.238058960505 2653.238058960505 6.822581265925438 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E 0.47104 - 55 1 2.147 54955.2 0.5 3423 3462 6871 DOHH2_400M_050219_1,6887 DOHH2_400M_050219_1,6887, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6888 38.264 167.0 387830.0 25 0 25490.0 + + 18957 RSSPLTVTM 9 95 496.26549723312274 990.5164415330456 2 496.2679626345634 MULTI CID FTMS 0 0 0 6871 81876.4296875 0.1417497998495314 -2 0.2124252319335937 17 Unmodified _LDEKRVTM_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8 34.10243960390752 0.3329570729325616 1 {[TV]|[{I|L}S]}RREVTM 8 -1 + 47.049 0.0 0.0 4.75 4.75 84.718 0.0 0.0 0.0 1.8842499412940583 33.02622715827073 1.8842499412940583 10.0 0 1.0 0.9208187539523752 0.9247425010840048 0.0 {[TV]|[{I|L}S]}RREVTM;{[TV]|[{I|L}S]}RRTVEM 4.75;3.7404 -;- 127 1 2.147 55074.3 1.0 3424 3462 6871 DOHH2_400M_050219_1,6888 DOHH2_400M_050219_1,6888,LDEKRVTM False False RSSPLTVTM 38.263797 496.267962634563 4280208.5 6871.0 ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;nc|ENSG00000125885|Q9UJA3-2|MCM8 6.890515009562175 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6889 38.278 800.0 136090.0 25 0 28611.0 + 18930 LCVRGFDTLLL 11 115 625.3515279588049 1248.6885029844098 2 625.3513671755791 MULTI CID FTMS 0 0 0 6871 85395.6171875 1.0 0 0.0 18 Unmodified _LCVRGFDTLLL_ REV__ENSG00000188305|ENST00000342063|PEAK3 16.149105407346934 0.6992268271266642 1 {NN|[MP]|[D{I|L}]|[EV]}[KT][YR]{I|L}D{I|L}{I|L} 10 -1 + 41.079 0.0 0.0 3.2897 3.2897 71.998 0.0 0.0 0.0 7.471799572732465 19.705976987639016 7.471799572732465 3.0102999566398125 0 0.5387254899964358 2.0 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}[KT][YR]{I|L}D{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KT][YR]EV{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[NV]|[RG]}[YR]{I|L}D{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[NV]|[RG]}[YR]EV{I|L}{I|L};[{I|L}T][KP]{[QG]|[NA]}HQD{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YQ][{I|L}P]{I|L}D{I|L}{I|L};[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}[YR]{I|L}D{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YQ][{I|L}P]EV{I|L}{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[RP][YR]{I|L}D{I|L}{I|L};{[TV]|[{I|L}S]}W[YG][W{I|L}]V{I|L}{I|L} 3.2897;3.0487;2.6906;2.4495;1.8828;1.6247;1.4138;1.3836;1.2624;1.2194 -;-;-;-;-;-;-;-;-;- 436 1 2.147 86808.6 0.4900000095367431 3425 3462 6871 DOHH2_400M_050219_1,6889 DOHH2_400M_050219_1,6889,LCVRGFDTLLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6891 38.282 3.4 13392000.0 25 0 2377400.0 + 24470 MIEKFPIWS 9 62 575.7997754924628 1149.5849980517255 2 575.8007690310478 MULTI CID FTMS 0 0 0 6890 11239637.0 0.2858365112903474 1 -0.110870361328125 1 Unmodified _MIEKFPIWS_ REV__ENSG00000157106|ENST00000446231|SMG1;REV__nc|ENSG00000157106|Q96Q15-2|SMG1;REV__nc|ENSG00000157106|Q96Q15-3|SMG1;REV__nc|ENSG00000157106|Q96Q15-4|SMG1 43.85829265575387 0.0542763391141878 1 M{I|L}EY 4 -1 62.607 0.0 0.0 5.4461 0.0 0.0 0.0 610.3344210260374 610.3344210260374 41.63811573052314 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 M{I|L}EY 5.4461 - 45 + 1 2.15 40587.8 1.0 3426 3463 6890 DOHH2_400M_050219_1,6891 DOHH2_400M_050219_1,6891,MIEKFPIWS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6892 38.284 54.0 849680.0 25 0 111960.0 + 43983 YIDEQFERY 9 60 631.7882606854622 1261.5619684377243 2 631.7883178591728 MULTI CID FTMS 0 0 0 6890 542744.5625 0.1301732154563384 2 -0.1854820251464843 2 Unmodified _YIDEQFERY_ ENSG00000168385|ENST00000391971|SEPTIN2;ENST00000467971.5_1_2:242255375-242276932:+|nuORF;ENST00000484167.5_1_2:242276764-242276932:+|nuORF;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2 47.594388314883695 0.0456443387682827 1 Y{I|L}DEQ{M(Oxidation (M))|F}ERY 9 0 + 106.82 0.0 0.0 8.4673 8.4673 93.185 0.0 0.0 0.0 93.32563782453214 12.191512336730028 12.191512336730028 9.208187539523747 0 0.9247425010840048 2.0 0.7742275032520141 0.4247425010840047 + + Y{I|L}DEQ{M(Oxidation (M))|F}ERY;Y{I|L}DE[AG]{M(Oxidation (M))|F}ERY;Y{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}EEERY;Y[{M(Oxidation (M))|F}V]QEEERY 8.4673;7.7374;4.7233;1.9874 +;-;-;- + 221 + 1 2.15 43040.8 1.0 3427 3463 6890 DOHH2_400M_050219_1,6892 DOHH2_400M_050219_1,6892,YIDEQFERY True True YIDEQFERY 38.283765 631.788317859173 50792348.0 6890.0 ENST00000467971.5_1_2:242255375-242276932:+|nuORF;;nc|ENSG00000168385|Q15019-3|SEPTIN2;;ENST00000484167.5_1_2:242276764-242276932:+|nuORF;;nc|ENSG00000168385|Q15019-2|SEPTIN2;;ENSG00000168385|ENST00000391971|SEPTIN2 8.098596890767416 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6893 38.285 64.0 752930.0 25 0 99201.0 + 6402 HVNGTFSVY 9 75 512.7406941607976 1023.4668353883952 2 512.7405273318291 MULTI CID FTMS 0 0 0 6890 630925.3125 1.0 0 0.0 3 Unmodified _DYHQLSVY_ ENSG00000182379|ENST00000349394|NXPH4;ENST00000556415.1_1_12:57615249-57619527:+|nuORF 18.13498045792455 0.6430038125133779 1 [HV]D{[SA]|[TG]}{M(Oxidation (M))|F}SVY 9 6 + 51.009 0.0 0.0 4.9839 4.9839 87.547 0.0 0.0 0.0 11.495973872717473 29.21327198560853 11.495973872717473 18.14326570884304 0 0.8182503180159344 1.3979400086720375 1.3494850021680094 0.0 [HV]D{[SA]|[TG]}{M(Oxidation (M))|F}SVY;[QA][PA]{M(Oxidation (M))|F}[DN]VY;[QA]VSE{[SA]|[TG]}W{M(Oxidation (M))|F};[QA]VS{M(Oxidation (M))|F}YY{M(Oxidation (M))|F};[QA]VS{[WT]|[RM]}W{M(Oxidation (M))|F};[QA]W{[WT]|[RM]}W{M(Oxidation (M))|F} 4.9839;3.2112;2.5985;2.0167;1.5505;0.55222 -;-;-;-;-;- 102 1 2.15 45044.5 1.0 3428 3463 6890 DOHH2_400M_050219_1,6893 DOHH2_400M_050219_1,6893,DYHQLSVY False False HVNGTFSVY 38.285326 512.740527331829 0.0 6890.0 ENSG00000182379|ENST00000349394|NXPH4;;ENST00000556415.1_1_12:57615249-57619527:+|nuORF 7.542099634806315 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6894 38.287 92.0 531850.0 25 0 101100.0 11949 GNALTPKRG 9 80 457.2645569022711 912.5145608713422 2 457.2643005251884 MULTI CID FTMS 0 0 0 6890 607744.6875 1.0 0 0.0 4 Unmodified _GNALTPKRG_ ENSG00000165521|ENST00000554922|EML5;nc|ENSG00000165521|Q05BV3-2|EML5;nc|ENSG00000165521|Q05BV3-4|EML5;nc|ENSG00000165521|Q05BV3|EML5 3.5964929083625545 0.7891324200061827 1 {I|L} 1 8 0.9691 0.0 0.0 0.1062 0.0 0.0 473.2387257656765 323.1707552545532 796.4094810202297 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.1062 + + 2 + 1 2.15 41017.5 1.0 3429 3463 6890 DOHH2_400M_050219_1,6894 DOHH2_400M_050219_1,6894,GNALTPKRG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6895 38.289 84.0 707740.0 25 0 114230.0 + 43036 VYAGLIST 8 81 412.23063932488174 0 412.2303649783134 PEAK CID FTMS 0 0 0 6890 561473.25 1.0 0 0.0 5 Unmodified _VYAGLIST_ REV__ENSG00000204385|ENST00000229729|SLC44A4;REV__nc|ENSG00000204385|Q53GD3-2|SLC44A4;REV__nc|ENSG00000204385|Q53GD3-3|SLC44A4;REV__nc|ENSG00000204385|Q53GD3-4|SLC44A4 2.889219685676258 0.5898224805723975 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.15 52431.8 1.0 3430 3463 6890 DOHH2_400M_050219_1,6895 DOHH2_400M_050219_1,6895,VYAGLIST False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6896 38.291 60.0 635480.0 25 0 44001.0 + 25188 MSVSSATALRP 11 70 560.2958762316076 1118.5771995300152 2 560.2945434451103 MULTI CID FTMS 0 0 0 6890 500743.28125 0.8717210738024282 1 -0.110870361328125 6 Unmodified _MSVSSATALRP_ REV__ENST00000350796.7_1_7:6202360-6202609:-|nuORF 9.38312468134398 0.8308777417566128 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}RP 10 -1 + 60.01 0.0 0.0 5.3648 5.3648 84.739 0.0 0.0 0.0 51.057291669019165 12.306634937682157 12.306634937682157 9.164539485499256 0 0.0 1.6989700043360187 0.0 0.3054621874040891 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTGG{[VA]|[{I|L}G]}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN[R{I|L}]GP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTGG[R{I|L}]GP 5.3648;4.5455;3.9485;3.1292 -;-;-;- 109 + 1 2.15 34544.1 1.0 3431 3463 6890 DOHH2_400M_050219_1,6896 DOHH2_400M_050219_1,6896,MSVSSATALRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6897 38.293 123.0 428580.0 25 0 75031.0 29230 QGSRRGIL 8 80 443.7646912314235 885.514829529647 2 443.7645141482353 MULTI CID FTMS 0 0 0 6890 504506.625 0.8340220744311532 -7 0.8024711608886719 7 Unmodified _QGSRRGIL_ ENST00000295702.8_1_1:155978989-155979055:-|nuORF 0.7936320650641473 0.8195151834710337 1 {I|L} 1 7 1.5938 0.0 0.0 0.17998 0.0 0.0 442.2719228907783 327.1446627252563 769.4165856160346 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.17998 + + 4 + 1 2.15 48162.9 1.0 3432 3463 6890 DOHH2_400M_050219_1,6897 DOHH2_400M_050219_1,6897,QGSRRGIL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6898 38.296 149.0 391430.0 25 0 49807.0 + 25513 NENHSGELW 9 99 543.2356151860496 1084.456677438899 2 543.2354614138603 MULTI CID FTMS 0 0 0 6890 303686.5625 0.9878059763360884 1 -0.110870361328125 8 Unmodified _NENHSGELW_ ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-3|ILK 29.84058131909904 0.1515068451768857 1 GE{I|L}W 4 5 30.94 0.0 0.0 2.853 0.0 0.0 581.219530174025 0.0 581.219530174025 0.0 18.17532531436136 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + GE{I|L}W 2.853 + + 141 1 2.15 49343.9 1.0 3433 3463 6890 DOHH2_400M_050219_1,6898 DOHH2_400M_050219_1,6898,NENHSGELW False True NENHSGELW 38.29624 543.23546141386 2391890.0 6890.0 nc|ENSG00000166333|Q13418-3|ILK;;ENSG00000166333|ENST00000299421|ILK 5.368490537007649 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6899 38.299 152.0 457650.0 25 0 64456.0 40666 VLEQALAP 8 102 420.7438616445853 839.4731703559706 2 420.7436096072197 MULTI CID FTMS 0 0 0 6890 279988.75 1.0 0 0.0 9 Unmodified _VLEQALAP_ ENST00000361028.5_1_6:28349926-28350043:-|nuORF;ENST00000396827.3_1_6:28348556-28350043:-|nuORF 0.7936320650641473 0.8195151834710337 1 G 1 8 3.4949 0.0 0.0 0.41631 0.0 0.0 419.2439355921019 360.1927889459594 779.4367245380613 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.41631 - 5 + 1 2.15 58138.2 1.0 3434 3463 6890 DOHH2_400M_050219_1,6899 DOHH2_400M_050219_1,6899,VLEQALAP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6900 38.303 170.0 357680.0 25 0 56301.0 + 19416 LETNELDLQQ 10 81 601.7998045276448 1201.5850561220896 2 601.7993041872978 MULTI CID FTMS 0 0 0 6890 271711.40625 1.0 0 0.0 10 Unmodified _LETNELDLQQ_ REV__ENSG00000100503|ENST00000530997|NIN;REV__nc|ENSG00000100503|Q8N4C6-10|NIN;REV__nc|ENSG00000100503|Q8N4C6-11|NIN;REV__nc|ENSG00000100503|Q8N4C6-2|NIN;REV__nc|ENSG00000100503|Q8N4C6-4|NIN;REV__nc|ENSG00000100503|Q8N4C6-5|NIN;REV__nc|ENSG00000100503|Q8N4C6-6|NIN;REV__nc|ENSG00000100503|Q8N4C6-9|NIN;REV__nc|ENSG00000100503|Q8N4C6|NIN 20.41453444215458 0.5050059513928961 1 [Y{I|L}]{M(Oxidation (M))|F}Y{I|L}D 6 -1 53.734 0.0 0.0 4.4719 0.0 0.0 0.0 384.1884249322876 384.1884249322876 28.913187455970544 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.1861818737241734 0.0 [Y{I|L}]{M(Oxidation (M))|F}Y{I|L}D 4.4719 - 425 + 1 2.15 46925.3 1.0 3435 3463 6890 DOHH2_400M_050219_1,6900 DOHH2_400M_050219_1,6900,LETNELDLQQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6901 38.31 400.0 259960.0 25 0 23362.0 + 10323 FSDVNMQEY 9 123 566.7343099945401 1131.4540670558802 2 566.7348510622978 MULTI CID FTMS 0 0 0 6890 197216.578125 1.0 0 0.0 11 Unmodified _FSDVNMQEY_ ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100 52.268347100219714 0.0353964759249114 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVNM 6 3 30.284 0.0 0.0 2.6766 0.0 0.0 0.0 435.1524062494927 435.1524062494927 7.809710731979294 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.8345468286156847 0.2887254899964357 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVNM 2.6766 + + 731 1 2.15 79644.5 1.0 3436 3463 6890 DOHH2_400M_050219_1,6901 DOHH2_400M_050219_1,6901,FSDVNMQEY True True FSDVNMQEY 38.30974 566.734851062298 1339868.25 6890.0 nc|ENSG00000067066|P23497-6|SP100;;nc|ENSG00000067066|P23497-5|SP100;;nc|ENSG00000067066|P23497|SP100;;nc|ENSG00000067066|P23497-2|SP100;;nc|ENSG00000067066|P23497-3|SP100;;nc|ENSG00000067066|P23497-7|SP100;;ENSG00000067066|ENST00000340126|SP100 6.0331471761067705 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6902 38.318 442.0 256880.0 25 0 18873.0 + 24475 MIEPRTLQY 9 131 583.7973539155329 1165.5801548978657 2 583.7968627810478 MULTI CID FTMS 0 0 0 6890 181126.5625 1.0 0 0.0 12 Oxidation (M) _M(Oxidation (M))IEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 59.36838082759317 0.0264317782606298 1 [VP]EPRTPE{I|L}E 10 6 + 63.396 0.0 0.0 5.439 5.439 77.664 0.0 0.0 0.0 2.7954523794167585 2.7954523794167585 2.7954523794167585 1.963950151760656 0 1.1435078169319297 2.0 0.6109243748081782 0.4247425010840047 [VP]EPRTPE{I|L}E;[VP]T{[RE]|[WV]}PPE{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EQ{I|L}{I|L}{I|L}QY;[VP]T[PG]MPPE{I|L}E;{M(Oxidation (M))|F}{I|L}EPTR{I|L}QY;[VP]EPRTPAHY;[VP]T[PG]NNPE{I|L}E;[VP]T{[VA]|[{I|L}G]}DPPE{I|L}E;[VP]T{[RE]|[WV]}PPAHY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[AG]{I|L}{I|L}{I|L}QY 5.439;5.2705;5.1991;5.0609;4.8841;4.7737;4.7573;4.6123;4.6052;4.4091 -;-;-;-;-;-;-;-;-;- 1876 1 2.15 89208.1 1.0 3437 3463 6890 DOHH2_400M_050219_1,6902 DOHH2_400M_050219_1,6902,MIEPRTLQY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6903 38.331 800.0 296030.0 25 0 10688.0 + 24748 MPFIKSQHEL 10 156 615.3210837103459 1228.6276144874917 2 615.3215209841728 MULTI CID FTMS 0 0 0 6890 150762.296875 0.6361966219976316 -1 0.1442375183105468 13 Unmodified _MPFIKSQHEL_ ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH 71.70789743142352 0.0188816056000227 1 M{I|L}M{I|L}K{[QS]|[NT]}HE{I|L} 10 2 + 75.029 0.0 0.0 6.1068 6.1068 80.477 0.0 0.0 0.0 45.291692309759824 13.37144598460634 13.37144598460634 2.244237387763093 0 2.075257498915996 1.5228787452803376 1.7302046884880935 0.3054621874040891 M{I|L}M{I|L}K{[QS]|[NT]}HE{I|L};MP{M(Oxidation (M))|F}{I|L}K{[QS]|[NT]}HE{I|L};M{I|L}{M(Oxidation (M))|F}H[{I|L}V]{I|L}DE{I|L};{I|L}MM{I|L}K{[QS]|[NT]}HE{I|L};M{I|L}M{I|L}{M(Oxidation (M))|F}[VP]HE{I|L};MPYH[{I|L}V]{I|L}DE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}[{I|L}V]HE{I|L}M;M{I|L}{M(Oxidation (M))|F}PK{[QS]|[NT]}HE{I|L};{I|L}M{M(Oxidation (M))|F}H[{I|L}V]{I|L}DE{I|L};MP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[VP]HE{I|L} 6.1068;5.9241;5.7543;5.5519;5.5342;5.3484;5.2766;5.2062;5.1994;5.1284 -;+;-;-;-;-;-;-;-;- + 4480 + 1 2.15 175572.5 0.699999988079071 3438 3463 6890 DOHH2_400M_050219_1,6903 DOHH2_400M_050219_1,6903,MPFIKSQHEL True True MPFIKSQHEL 38.33144 615.321520984173 1269533.5 6890.0 ENSG00000174442|ENST00000307897|ZWILCH;;nc|ENSG00000174442|Q9H900-2|ZWILCH 5.575438976287842 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6904 38.336 245.0 241510.0 25 0 28127.0 + 25520 NENSNIQVL 9 102 515.7620119553768 1029.5094709775535 2 515.7612182497978 MULTI CID FTMS 0 0 0 6890 129810.84375 0.5656467737296887 -1 0.1442375183105468 14 Unmodified _NENSNIQVL_ ENSG00000145216|ENST00000337488|FIP1L1;ENST00000505125.5_1_4:54245288-54325613:+|nuORF;ENST00000513008.5_1_4:54292015-54325613:+|nuORF;ENST00000513975.5_1_4:54244032-54306933:+|nuORF;nc|ENSG00000145216|Q6UN15-3|FIP1L1;nc|ENSG00000145216|Q6UN15-4|FIP1L1;nc|ENSG00000145216|Q6UN15-5|FIP1L1 47.74868867922204 0.0453060283459952 1 [AG]DNSN{I|L} 7 6 37.345 0.0 0.0 3.6274 0.0 0.0 0.0 355.19952072785253 355.19952072785253 18.92832983051572 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.9517188504113844 0.75 [AG]DNSN{I|L} 3.6274 - 217 1 2.15 50538.0 1.0 3439 3463 6890 DOHH2_400M_050219_1,6904 DOHH2_400M_050219_1,6904,NENSNIQVL True True NENSNIQVL 38.336019 515.761218249798 1374770.875 6890.0 ENST00000513975.5_1_4:54244032-54306933:+|nuORF;;nc|ENSG00000145216|Q6UN15-3|FIP1L1;;ENST00000505125.5_1_4:54245288-54325613:+|nuORF;;nc|ENSG00000145216|Q6UN15-4|FIP1L1;;ENSG00000145216|ENST00000337488|FIP1L1;;ENST00000513008.5_1_4:54292015-54325613:+|nuORF;;nc|ENSG00000145216|Q6UN15-5|FIP1L1 5.162896712621053 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6905 38.35 800.0 249150.0 25 0 12903.0 -1 0 113 685.6525451063392 2053.9358059192173 3 685.9877807497978 MULTI CID FTMS 0 0 0 6890 127429.75 0.7936518780165788 -1 0.1442375183105468 15 1 {[QN]|[E{I|L}]|[KN]}{I|L}NDVDHRYVNYEE{M(Oxidation (M))|F} 16 -1 + 87.659 0.0 0.0 4.2679 4.2679 76.935 0.0 0.0 0.0 13.187587626244124 70.90488573913518 13.187587626244124 4.771212547196626 0 1.079689690656103 0.8538719643217619 0.3807196863200844 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}{I|L}NDVDHRYVNYEE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}RADVDHRYVNYEE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}VQDVDHRYVNYEE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}NDVD{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]}VNYEE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}NDVDHRYVGGYEE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}GGDVDHRYVNYEE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}RADVD{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]}VNYEE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}VQDVD{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]}VNYEE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}NDT{[{M(Oxidation (M))|F}C]|[YS]}RYVNYEE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}NDT[{M(Oxidation (M))|F}E][RH]VNYEE{M(Oxidation (M))|F} 4.2679;4.0356;4.0356;3.9644;3.829;3.829;3.7321;3.7321;3.6481;3.6369 -;-;-;-;-;-;-;-;-;- 3896 1 2.15 154371.9 0.6499999761581421 3440 3463 6890 DOHH2_400M_050219_1,6905 DOHH2_400M_050219_1,6905, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6906 38.36 497.0 473970.0 25 0 53082.0 + 6957 EEIDVDGKF 9 177 526.2500196618824 1050.4854863905648 2 526.2501708865166 MULTI CID FTMS 0 0 0 6890 123536.234375 1.0 0 0.0 16 Unmodified _EEIDVDGKF_ ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF 24.99096001346401 0.2132109383330889 1 EE{I|L}DV[NG]{I|L}Y 9 3 + 42.826 0.0 0.0 4.0768 4.0768 71.141 0.0 0.0 0.0 1.5094614524342376 0.6942140875846903 0.6942140875846903 0.6942140875846903 0 0.3494850021680094 1.3979400086720375 0.0 0.0 EE{I|L}DV[NG]{I|L}Y;EE{I|L}DVDGK{M(Oxidation (M))|F};EE{I|L}D[RN]{I|L}Y;EE{I|L}DG{[NV]|[RG]}{I|L}Y;EE{I|L}DVS{[NV]|[RG]}{M(Oxidation (M))|F};EE{[RE]|[WV]}{[NV]|[RG]}{I|L}Y;EE{I|L}D[RD]K{M(Oxidation (M))|F};EE{I|L}DG[DV]K{M(Oxidation (M))|F};EE{I|L}DG[WR]{M(Oxidation (M))|F};EE{I|L}DG[R{M(Oxidation (M))|F}]SV 4.0768;4.0107;3.4601;3.1684;2.3447;1.9617;1.8957;1.604;1.5604;1.0343 -;+;-;-;-;-;-;-;-;- + 2186 + 1 2.15 185005.0 1.0 3441 3463 6890 DOHH2_400M_050219_1,6906 DOHH2_400M_050219_1,6906,EEIDVDGKF False True EEIDVDGKF 38.359813 526.250170886517 450380.71875 6890.0 ENST00000504788.5_1_5:126112928-126171953:+|nuORF;;ENSG00000113368|ENST00000261366|LMNB1 3.186643679936727 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6907 38.364 193.0 286600.0 25 0 32742.0 6858 EEEEEEIRP 9 75 580.2567433592883 1158.4989337853765 2 580.2557250857353 MULTI CID FTMS 0 0 0 6890 123228.0078125 0.3345518927953304 -1 0.1442375183105468 17 Unmodified _EEEEEEIRP_ ENSG00000151572|ENST00000392977|ANO4;nc|ENSG00000151572|Q32M45-2|ANO4 7.289230182591677 0.6602208344931196 1 STNG{I|L}PR 7 8 54.953 0.0 0.0 4.7435 0.0 0.0 415.1060431258299 0.0 415.1060431258299 0.0 40.34903859726029 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.7742275032520141 STNG{I|L}PR 4.7435 - 95 + 1 2.15 45637.1 1.0 3442 3463 6890 DOHH2_400M_050219_1,6907 DOHH2_400M_050219_1,6907,EEEEEEIRP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6908 38.368 232.0 274030.0 25 0 12678.0 + 396 AEDSARTLLY 10 107 569.7924166242487 1137.5702803152974 2 569.7925292849541 MULTI CID FTMS 0 0 0 6890 112074.9375 0.9324926576952592 -1 0.1442375183105468 18 Unmodified _AEDSARTLLY_ ENSG00000174989|ENST00000652555|FBXW8;nc|ENSG00000174989|Q8N3Y1-2|FBXW8 34.221707139014875 0.2185845369562963 1 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HKCT{I|L}{I|L}Y 9 6 + 42.802 0.0 0.0 3.7626 3.7626 74.403 0.0 0.0 0.0 3.8013692957795016 10.06411921103662 3.8013692957795016 3.8013692957795016 0 0.5 0.0 0.0 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HKCT{I|L}{I|L}Y;[TA][EP]KCT{I|L}{I|L}Y;{[CP]|[EA]}D[WK]T{I|L}{I|L}Y;{[CP]|[EA]}[TP]KCT{I|L}{I|L}Y;{[CT]|[{M(Oxidation (M))|F}G]}GHKCT{I|L}{I|L}Y;{[CP]|[EA]}D[RP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Y;{[ET]|[MV]}[PA]KCT{I|L}{I|L}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HK{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Y;{[CP]|[EA]}DS[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Y;[TA][EP]K{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Y 3.7626;3.4284;3.4115;3.2378;3.1567;2.8779;2.6873;2.6435;2.3486;2.3093 -;-;-;-;-;-;-;-;-;- 315 1 2.15 50885.7 1.0 3443 3463 6890 DOHH2_400M_050219_1,6908 DOHH2_400M_050219_1,6908,AEDSARTLLY False True AEDSARTLLY 38.367888 569.792529284954 836143.375 6890.0 ENSG00000174989|ENST00000652555|FBXW8;;nc|ENSG00000174989|Q8N3Y1-2|FBXW8 7.266461690266927 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6909 38.375 373.0 157840.0 25 0 11013.0 -1 0 104 531.3015725086016 530.2942960420015 1 533.3055297732353 MULTI CID FTMS 0 0 0 6890 220533.3125 1.0 0 0.0 19 1 AY 2 -1 13.979 0.0 0.0 2.6362 0.0 0.0 278.1830117175859 0.0 278.1830117175859 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 2.6362 - 21 + 1 2.15 57695.0 1.0 3444 3463 6890 DOHH2_400M_050219_1,6909 DOHH2_400M_050219_1,6909, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6910 38.388 800.0 202390.0 25 0 22098.0 -1 0 113 948.963761834109 1895.912970735018 2 949.463427722454 MULTI CID FTMS 0 0 0 6890 139158.125 0.6561824283403332 -1 0.1442375183105468 20 1 H{I|L}{[WN]|[YH]}[H{I|L}]DH{I|L}P 10 -1 51.094 0.0 0.0 2.6949 0.0 0.0 0.0 630.2507418268186 630.2507418268186 13.654146370619138 0.0 0.0 0.0 0 0.8252574989159953 1.6989700043360187 0.4247425010840047 0.0 H{I|L}{[WN]|[YH]}[H{I|L}]DH{I|L}P 2.6949 - 1869 + 1 2.15 108546.4 0.5400000214576721 3445 3463 6890 DOHH2_400M_050219_1,6910 DOHH2_400M_050219_1,6910, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6912 38.393 79.0 536990.0 25 0 63593.0 + 7218 EERADLIAY 9 58 540.2717969300464 1078.5290409268928 2 540.2723876833916 MULTI CID FTMS 0 0 0 6911 400037.59375 0.1034084069208878 2 -0.0936355590820312 1 Unmodified _EERADLIAY_ ENSG00000172115|ENST00000305786|CYCS 17.11289562659939 0.3734572693229295 1 {I|L}{I|L}AY 4 5 41.938 0.0 0.0 3.8885 0.0 0.0 600.250403981444 0.0 600.250403981444 0.0 34.94850021680094 0.0 0.0 0 1.0 0.0 0.0 0.0 + {I|L}{I|L}AY 3.8885 + + 21 1 2.15 38291.8 1.0 3446 3464 6911 DOHH2_400M_050219_1,6912 DOHH2_400M_050219_1,6912,EERADLIAY False True EERADLIAY 38.393231 540.272387683392 42760140.0 6911.0 ENSG00000172115|ENST00000305786|CYCS 4.301897048950195 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6913 38.395 50.0 983580.0 25 0 193620.0 + 1197 AIDNPLHY 8 69 471.7379992747355 941.461445616271 2 471.7378112673759 MULTI CID FTMS 0 0 0 6911 857555.1875 0.5196135823399708 1 -0.0746116638183593 2 Unmodified _AIDNPLHY_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 26.34127834903884 0.4900704351052977 1 [{I|L}A]DNP{I|L}{[WN]|[YH]} 8 0 + 52.664 0.0 0.0 5.5938 5.5938 87.477 0.0 0.0 0.0 39.47621246364342 6.989700043360188 6.989700043360188 9.262137858390815 0 0.4247425010840047 2.0 0.0 0.0 + + [{I|L}A]DNP{I|L}{[WN]|[YH]};[{I|L}A]DGGP{I|L}{[WN]|[YH]};[{I|L}A]YY{I|L}{[WN]|[YH]} 5.5938;4.61;3.2411 +;-;- + 96 + 1 2.15 44930.6 1.0 3447 3464 6911 DOHH2_400M_050219_1,6913 DOHH2_400M_050219_1,6913,AIDNPLHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6914 38.396 38.0 1774900.0 25 0 218720.0 -1 IVEGMPLLY 9 65 525.7827146691898 1049.5508764051797 2 525.7824584841728 MULTI CID FTMS 0 0 0 6911 1398285.75 0.127579140383557 -3 0.341339111328125 3 Oxidation (M) _IVEGM(Oxidation (M))PLLY_ ENSG00000163817|ENST00000358525|SLC6A20;nc|ENSG00000163817|Q9NP91-2|SLC6A20 18.13498045792455 0.3457906370836843 1 {I|L}V{I|L}Y 4 -1 41.938 0.0 0.0 3.9958 0.0 0.0 543.24028212715 0.0 543.24028212715 0.0 24.82516286606369 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}V{I|L}Y 3.9958 - 56 1 2.15 56607.7 1.0 3448 3464 6911 DOHH2_400M_050219_1,6914 DOHH2_400M_050219_1,6914,IVEGMPLLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6915 38.397 58.0 885910.0 25 0 80363.0 + 6626 EASPVVHYL 9 65 507.7666410706348 1013.5187292080695 2 507.7665893435478 MULTI CID FTMS 0 0 0 6911 774873.8125 0.9902910907532326 1 -0.0746116638183593 4 Unmodified _EASPVVHYL_ REV__ENSG00000183111|ENST00000333677|ARHGEF37 30.22481116460888 0.1466181017706357 1 {[CP]|[EA]}SP{I|L}KPSW 9 -1 + 58.109 0.0 0.0 5.7334 5.7334 91.006 0.0 0.0 0.0 23.284766214434924 11.249387366083 11.249387366083 23.38402317946739 0 0.9247425010840048 0.0 0.4247425010840047 0.0 {[CP]|[EA]}SP{I|L}KPSW;[PS]{I|L}KPSW{[CP]|[EA]};[{I|L}P]SKPSW{[CP]|[EA]};[{I|L}P]KSPSW{[CP]|[EA]};[PS]{I|L}[WR]R{[CP]|[EA]};[K{I|L}]PSPSW{[CP]|[EA]};[{I|L}P]S[WR]R{[CP]|[EA]};[{I|L}P]K[RD]W{[CP]|[EA]};[{I|L}P]K[WD]R{[CP]|[EA]};[PS]{I|L}[WR][VG]{[CP]|[EA]} 5.7334;3.4262;3.0192;2.5485;1.828;1.6104;1.421;1.124;0.95027;0.91415 -;-;-;-;-;-;-;-;-;- 284 + 1 2.15 44652.5 1.0 3449 3464 6911 DOHH2_400M_050219_1,6915 DOHH2_400M_050219_1,6915,EASPVVHYL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6916 38.399 62.0 831800.0 25 0 100600.0 -1 0 71 632.9782683059242 1895.9129755179724 3 632.9782592654228 MULTI CID FTMS 0 0 0 6911 596255.125 1.0 0 0.0 5 1 [H{I|L}]NP{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H 13 -1 49.232 0.0 0.0 2.5968 0.0 0.0 0.0 343.1648434230892 343.1648434230892 38.26338844402724 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.3807196863200844 0.0 [H{I|L}]NP{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H 2.5968 - 123 1 2.15 42864.5 1.0 3450 3464 6911 DOHH2_400M_050219_1,6916 DOHH2_400M_050219_1,6916, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6917 38.402 159.0 388840.0 25 0 25979.0 + 455 AEFQRLPSY 9 79 555.7827975731427 1109.551042213085 2 555.7828246951103 MULTI CID FTMS 0 0 0 6911 442365.25 0.20897708334785 2 -0.0936355590820312 6 Unmodified _AEFQRLPSY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 37.07464296494664 0.0915153923251136 1 {[CP]|[EA]}{M(Oxidation (M))|F}QR{I|L}PSY 9 0 + 62.017 0.0 0.0 5.5894 5.5894 86.506 0.0 0.0 0.0 35.99632348615587 14.09256854528806 14.09256854528806 9.208187539523747 0 2.167735320183944 0.0 0.9247425010840048 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}QR{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}[AG]R{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{[CP]|[EA]}{I|L}PSY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}{[CP]|[EA]}PSY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}[TA][DP]Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}[PS]{[CP]|[EA]}Y 5.5894;4.7595;3.0188;2.6189;2.6078;1.3725;1.2599 +;-;-;-;-;-;- + 182 + 1 2.15 53900.2 1.0 3451 3464 6911 DOHH2_400M_050219_1,6917 DOHH2_400M_050219_1,6917,AEFQRLPSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6918 38.405 139.0 333320.0 25 0 23914.0 + 15794 ISEQTGKELLY 11 81 640.8406369087187 0 640.8407470583916 PEAK CID FTMS 0 0 0 6911 342978.78125 0.3317939451477061 -2 0.2551078796386719 7 Unmodified _ISEQTGKELLY_ ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY 57.10758569107544 0.0225987140756201 1 {I|L}{I|L}CQTG 6 7 38.281 0.0 0.0 2.9915 0.0 0.0 181.08390946021228 480.2816256158813 661.3655350760936 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 1.0 {I|L}{I|L}CQTG 2.9915 - 467 + 1 2.15 44140.0 1.0 3452 3464 6911 DOHH2_400M_050219_1,6918 DOHH2_400M_050219_1,6918,ISEQTGKELLY True True ISEQTGKELLY 38.404671 640.840747058392 10439129.0 6911.0 ENSG00000131473|ENST00000352035|ACLY;;nc|ENSG00000131473|P53396-2|ACLY;;nc|ENSG00000131473|P53396-3|ACLY 6.3178666432698565 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6919 38.408 170.0 320810.0 25 0 47837.0 + 31759 RSDTPLIY 8 81 482.75878281454095 963.503012695882 2 482.7586547732353 MULTI CID FTMS 0 0 0 6911 252590.953125 0.2029807970958081 2 -0.0936355590820312 8 Unmodified _RSDTPLIY_ ENSG00000196305|ENST00000443024|IARS1 22.736283301280096 0.5659792798204337 1 TP{I|L}{I|L}Y 5 3 45.618 0.0 0.0 4.7345 0.0 0.0 358.15965468574376 0.0 358.15965468574376 0.0 33.92281585743653 0.0 0.0 0 1.0 0.0 0.3054621874040891 0.0 + TP{I|L}{I|L}Y 4.7345 + + 58 1 2.15 47407.9 1.0 3453 3464 6911 DOHH2_400M_050219_1,6919 DOHH2_400M_050219_1,6919,RSDTPLIY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6920 38.416 459.0 375110.0 25 0 42231.0 + 20496 LLLERAKEL 9 131 542.8399509988068 1083.6653490644137 2 542.8403808474541 MULTI CID FTMS 0 0 0 6911 220227.65625 0.8897674255645335 -1 0.110870361328125 9 Unmodified _LLLERAKEL_ ENSG00000115758|ENST00000234111|ODC1 83.42873516780209 0.0166860047644719 1 {I|L}{I|L}{I|L}ERAKE{I|L} 9 0 + 99.989 0.0 0.0 9.2269 9.2269 98.962 0.0 0.0 0.0 73.34585097418334 22.931372718143663 22.931372718143663 47.23237952631294 0 1.873712505420024 2.0 2.110924374808178 0.0 + + {I|L}{I|L}{I|L}ERAKE{I|L};{I|L}{I|L}{I|L}{M(Oxidation (M))|F}{I|L}RR[PG];{I|L}{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[VG]N[VP];{I|L}{I|L}{I|L}[C(Carbamidomethyl (C))N]{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}{I|L}ER{[QS]|[NT]}{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}{I|L}RR[PG];{I|L}{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[VG]GG[VP];{I|L}{I|L}{M(Oxidation (M))|F}{I|L}{I|L}[VG]N[VP];{I|L}{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[VG][VG][PG];[{I|L}T]NR{I|L}E{I|L}{I|L}{I|L} 9.2269;4.8684;4.7589;4.4817;4.0673;4.0126;3.9132;3.9032;3.7921;3.3155 +;-;-;-;-;-;-;-;-;- + 825 + 1 2.15 132574.9 1.0 3454 3464 6911 DOHH2_400M_050219_1,6920 DOHH2_400M_050219_1,6920,LLLERAKEL True True LLLERAKEL 38.416121 542.840380847454 1489563.5 6911.0 ENSG00000115758|ENST00000234111|ODC1 1.1863961219787598 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6921 38.421 234.0 315710.0 25 0 16800.0 + 35154 SRPDSILGMQF 11 105 625.813694281041 1249.6128356288818 2 625.8139526247978 MULTI CID FTMS 0 0 0 6911 202505.359375 0.3096497151632503 -2 0.2551078796386719 10 Unmodified _SRPDSILGMQF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 51.629811660486645 0.1086041609037681 1 [AG]EAQ{I|L}[KG]AMQ{M(Oxidation (M))|F} 12 -1 + 77.149 0.0 0.0 6.1739 6.1739 78.035 0.0 0.0 0.0 11.840601887269573 16.61181443446619 11.840601887269573 0.268991081558056 0 0.6549471895720985 1.6989700043360187 1.7728787452803374 1.9436726795685344 [AG]EAQ{I|L}[KG]AMQ{M(Oxidation (M))|F};[AG]EQ[K{I|L}]QAMQ{M(Oxidation (M))|F};[AG]EQA{I|L}[KG]AMQ{M(Oxidation (M))|F};[AG]EAG[K{I|L}]QAMQ{M(Oxidation (M))|F};[AG]EAGA{I|L}[KG]AMQ{M(Oxidation (M))|F};[AG]EAQ{I|L}[KG]AM[AG]{M(Oxidation (M))|F};[AG]EQ[K{I|L}][AG]AMQ{M(Oxidation (M))|F};[AG]EQ[K{I|L}]QAM[AG]{M(Oxidation (M))|F};[AG]EQA{I|L}[KG]AM[AG]{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AQ{I|L}[KG]AMQ{M(Oxidation (M))|F} 6.1739;6.1523;6.1489;5.9428;5.7107;5.4458;5.4218;5.4218;5.4208;5.2263 -;-;-;-;-;-;-;-;-;- 1283 1 2.15 62949.2 1.0 3455 3464 6911 DOHH2_400M_050219_1,6921 DOHH2_400M_050219_1,6921,SRPDSILGMQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6922 38.427 336.0 361070.0 25 0 28991.0 + + 23477 FPENLLLHR 9 155 380.2332108836047 1137.6778032510142 3 380.5732910037041 MULTI CID FTMS 0 0 0 6911 174978.171875 0.0284872308170326 9 -0.8113327026367188 11 Unmodified _LTHPRLVFR_ ENSG00000132801|ENST00000255152|ZSWIM3 7.101721422024254 0.6667666702315642 1 N{I|L}{I|L}{I|L}HR 6 -1 38.496 0.0 0.0 3.3838 0.0 0.0 373.2127896785517 0.0 373.2127896785517 0.0 17.26764566300764 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.25 N{I|L}{I|L}{I|L}HR 3.3838 - 325 + 1 2.15 99617.1 1.0 3456 3464 6911 DOHH2_400M_050219_1,6922 DOHH2_400M_050219_1,6922,LTHPRLVFR False False FPENLLLHR 38.426604 380.573291003704 260272.203125 6911.0 ENSG00000132801|ENST00000255152|ZSWIM3 1.5946001410484314 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6923 38.44 800.0 115120.0 25 0 20727.0 -1 EMYQELMEMCH 11 97 766.7783785076341 1531.542204082068 2 766.7785522341728 MULTI CID FTMS 0 0 0 6911 143774.609375 0.4605540417711077 5 -0.3871917724609375 12 Carbamidomethyl (C),2 Oxidation (M) _EMYQELM(Oxidation (M))EM(Oxidation (M))C(Carbamidomethyl (C))H_ ENSG00000144010|ENST00000639673|TRIM43B;ENSG00000144015|ENST00000272395|TRIM43 1.3295316138638542 0.8688751186870782 1 [NP]SND{M(Oxidation (M))|F}EM 8 -1 46.456 0.0 0.0 3.0333 0.0 0.0 0.0 594.1704417347844 594.1704417347844 22.82306713814773 0.0 0.0 0.0 0 0.5 0.958607314841775 0.8539171939081173 1.1549471895720984 [NP]SND{M(Oxidation (M))|F}EM 3.0333 - 441 1 2.15 69683.9 0.6600000262260437 3457 3464 6911 DOHH2_400M_050219_1,6923 DOHH2_400M_050219_1,6923,EMYQELMEMCH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6924 38.452 640.0 113030.0 25 0 11149.0 + 36871 TENNGPQTVW 10 121 573.2646242138577 1144.5146954945153 2 573.2648193240166 MULTI CID FTMS 0 0 0 6911 102925.65625 1.0 0 0.0 13 Unmodified _TENNGPQTVW_ ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17 10.073929032068715 0.6785112666868882 1 {M(Oxidation (M))|F}VW 3 8 21.682 0.0 0.0 1.8945 0.0 0.0 694.3187248908029 0.0 694.3187248908029 0.0 7.703037561203843 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}VW 1.8945 - 177 + 1 2.15 60633.2 1.0 3458 3464 6911 DOHH2_400M_050219_1,6924 DOHH2_400M_050219_1,6924,TENNGPQTVW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6925 38.463 656.0 159000.0 25 0 14966.0 + 20978 LNMVCMLNY 9 147 550.7487204306667 1099.482887928133 2 550.7480956912041 MULTI CID FTMS 0 0 0 6911 83792.71875 0.0704147002619351 2 -0.0936355590820312 14 Unmodified _LNMVCMLNY_ ENST00000196371.9_1_5:41731473-41731578:-|nuORF 16.942295170755138 0.3780752226737986 1 K{I|L}K{I|L}HS{M(Oxidation (M))|F} 7 8 33.633 0.0 0.0 3.0589 0.0 0.0 227.95781709257383 0.0 227.95781709257383 0.0 13.939809428134396 0.0 0.0 0 0.0 0.0 0.9802046884880938 0.0 K{I|L}K{I|L}HS{M(Oxidation (M))|F} 3.0589 - 315 + 1 2.15 82274.1 1.0 3459 3464 6911 DOHH2_400M_050219_1,6925 DOHH2_400M_050219_1,6925,LNMVCMLNY False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6927 38.468 50.0 1007900.0 25 0 171070.0 + 31681 RRLEAGAP 8 76 435.2515280440389 868.4885031548779 2 435.2511169314384 MULTI CID FTMS 0 0 0 6926 1046053.0625 0.7344635230273528 -4 0.4159507751464844 1 Unmodified _RRLEAGAP_ REV__ENSG00000168348|ENST00000307169|INSM2 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.166 44020.9 1.0 3460 3465 6926 DOHH2_400M_050219_1,6927 DOHH2_400M_050219_1,6927,RRLEAGAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6928 38.482 800.0 245130.0 25 0 29237.0 + 19409 LESWALIVL 9 195 522.308981329348 1042.6034097254958 2 522.3090087771416 MULTI CID FTMS 0 0 0 6926 71352.3125 0.1327489668858108 2 -0.1185073852539062 2 Unmodified _LESWALIVL_ REV__ENST00000491815.1_1_1:14099628-14099778:+|nuORF 12.531546534597751 0.4974689918368763 1 {I|L}D 2 -1 31.335 0.0 0.0 3.0054 0.0 0.0 0.0 811.4695771579575 811.4695771579575 11.870866433571445 0.0 0.0 0.0 0 0.1505149978319906 0.8860566476931632 0.0 0.0 {I|L}D 3.0054 - 685 + 1 2.166 152287.8 0.7599999904632568 3461 3465 6926 DOHH2_400M_050219_1,6928 DOHH2_400M_050219_1,6928,LESWALIVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6930 38.488 174.0 306800.0 25 0 18411.0 -1 0 67 771.7017173601471 2312.083322680641 3 772.0363036990166 MULTI CID FTMS 0 0 0 6929 414873.9375 1.0 0 0.0 1 1 GMTGYG{M(Oxidation (M))|F} 7 -1 39.902 0.0 0.0 1.7258 0.0 0.0 973.4416733659912 622.3676086450422 1595.8092820110337 0.0 0.0 0.0 0.0 0 1.774227503252014 0.0 0.0 0.0 GMTGYG{M(Oxidation (M))|F} 1.7258 - 357 + 1 2.166 43697.0 1.0 3462 3466 6929 DOHH2_400M_050219_1,6930 DOHH2_400M_050219_1,6930, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6931 38.491 171.0 487080.0 25 0 64503.0 + 1069 AGHPHIITL 9 96 479.7783305051056 957.5421080770112 2 479.7774230837822 MULTI CID FTMS 0 0 0 6929 432670.5625 0.5071931493201969 -1 0.0190238952636718 2 Unmodified _AGHPHIITL_ ENSG00000156873|ENST00000563588|PHKG2;nc|ENSG00000156873|P15735-2|PHKG2 26.34127834903884 0.1960301806784604 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}G[HA]{I|L}T{I|L} 9 4 + 27.866 0.0 0.0 2.9101 2.9101 74.572 0.0 0.0 0.0 3.613102926332562 6.842021443606189 3.613102926332562 6.478174818886377 0 0.7742275032520141 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}G[HA]{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]{I|L}{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[HQ]{I|L}T{I|L};[{I|L}T][QA][QA]{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[QT]{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[WR]{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[HQ]T{I|L};[{I|L}T][HK][{M(Oxidation (M))|F}V]T{I|L};[{I|L}T][QA][RK]E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[VP][PG]E{I|L} 2.9101;2.2336;2.2336;2.044;1.9909;1.9502;1.7353;1.3142;1.1597;0.42975 -;-;-;-;-;-;-;-;-;- 114 1 2.166 67635.5 1.0 3463 3466 6929 DOHH2_400M_050219_1,6931 DOHH2_400M_050219_1,6931,AGHPHIITL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6932 38.494 140.0 430030.0 25 0 57084.0 + -1 MHMVLLEMLTY 11 90 698.8374125483135 1395.660272163427 2 698.8370849490166 MULTI CID FTMS 0 0 0 6929 417658.75 0.2510144944085611 -1 0.0190238952636718 3 Oxidation (M) _MHMVLLEM(Oxidation (M))LTY_ REV__ENSG00000078618|ENST00000352171|NRDC;REV__nc|ENSG00000078618|O43847-2|NRDC 17.11289562659939 0.6791789249425932 1 VVDP[NS]{I|L}SKDE 11 -1 65.226 0.0 0.0 4.6735 0.0 0.0 0.0 209.0574740045532 209.0574740045532 32.79941066626141 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3494850021680094 0.3807196863200844 VVDP[NS]{I|L}SKDE 4.6735 - 2668 + 1 2.166 47357.9 1.0 3464 3466 6929 DOHH2_400M_050219_1,6932 DOHH2_400M_050219_1,6932,MHMVLLEMLTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6933 38.497 155.0 507740.0 25 0 25312.0 + 25903 NLKLKLHSF 9 127 367.22518496414114 1098.6537254926234 3 367.2249633669853 MULTI CID FTMS 0 0 0 6929 403210.625 1.0 0 0.0 4 Unmodified _NLKLKLHSF_ ENSG00000162521|ENST00000373493|RBBP4;ENST00000502424.1_1_5:14797477-14798464:-|nuORF;nc|ENSG00000162521|Q09028-2|RBBP4;nc|ENSG00000162521|Q09028-3|RBBP4;nc|ENSG00000162521|Q09028-4|RBBP4 34.221707139014875 0.1071766711162635 1 N{I|L}K{I|L}K{I|L}HS{M(Oxidation (M))|F} 9 0 + 85.165 0.0 0.0 7.7518 7.7518 93.568 0.0 0.0 0.0 13.979400086720377 10.14497986744422 10.14497986744422 10.14497986744422 0 0.1989700043360188 1.6989700043360187 0.7134679910804405 0.0 + + N{I|L}K{I|L}K{I|L}HS{M(Oxidation (M))|F};N{I|L}K{I|L}K{I|L}HAY;N{I|L}K{I|L}K{I|L}{M(Oxidation (M))|F}[HS];N{I|L}K{I|L}K{I|L}EE{I|L};N{I|L}[RH]{I|L}[RK]Y 7.7518;6.8284;5.8055;5.2486;2.8974 +;-;-;-;- + 221 + 1 2.166 65911.6 1.0 3465 3466 6929 DOHH2_400M_050219_1,6933 DOHH2_400M_050219_1,6933,NLKLKLHSF True True NLKLKLHSF 38.497231 367.224963366985 2834678.875 6929.0 nc|ENSG00000162521|Q09028-4|RBBP4;;nc|ENSG00000162521|Q09028-3|RBBP4;;ENST00000502424.1_1_5:14797477-14798464:-|nuORF;;nc|ENSG00000162521|Q09028-2|RBBP4;;ENSG00000162521|ENST00000373493|RBBP4 5.8180999755859375 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6934 38.501 172.0 505970.0 25 0 36177.0 + 30548 RENDIKSYF 9 84 586.2912261774312 1170.5678994216623 2 586.2906982302666 MULTI CID FTMS 0 0 0 6929 285744.03125 0.2867858345664064 -1 0.0190238952636718 5 Unmodified _RENDIKSYF_ ENSG00000168496|ENST00000305885|FEN1;ENST00000401028.2_1_1:91793937-91794252:+|nuORF 45.739877483867886 0.0497104363764649 1 S[YE]{I|L}KSY{M(Oxidation (M))|F} 8 3 65.667 0.0 0.0 5.6098 0.0 0.0 135.06863600898595 0.0 135.06863600898595 0.0 58.03009725027536 0.0 0.0 0 1.5228787452803374 0.0 0.805462187404089 0.4247425010840047 S[YE]{I|L}KSY{M(Oxidation (M))|F} 5.6098 - 258 1 2.166 68740.9 1.0 3466 3466 6929 DOHH2_400M_050219_1,6934 DOHH2_400M_050219_1,6934,RENDIKSYF True True RENDIKSYF 38.500604 586.290698230267 11373307.0 6929.0 ENSG00000168496|ENST00000305885|FEN1;;ENST00000401028.2_1_1:91793937-91794252:+|nuORF 5.228189786275228 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6935 38.505 263.0 407850.0 25 0 39561.0 + 33348 SGGKKSVG 8 147 360.2065060217567 718.3984591103134 2 360.2065307497978 MULTI CID FTMS 0 0 0 6929 271405.0625 0.069900364220721 -3 0.2045059204101562 6 Unmodified _SGGKKSVG_ REV__ENST00000240185.7_1_1:11083899-11083992:+|nuORF 2.577480529830294 0.808687252328423 1 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 1.7364 0.0 0.0 553.3193860896088 0.0 553.3193860896088 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.7364 - 17 + 1 2.166 90000.6 1.0 3467 3466 6929 DOHH2_400M_050219_1,6935 DOHH2_400M_050219_1,6935,SGGKKSVG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6936 38.514 453.0 407470.0 25 0 42214.0 + 6990 EEIPVHEEF 9 149 564.7643253637214 1127.5140977942426 2 564.7639037966728 MULTI CID FTMS 0 0 0 6929 222266.609375 0.4659456033436567 -1 0.0190238952636718 7 Unmodified _EEIPVHEEF_ ENSG00000118961|ENST00000237822|LDAH;nc|ENSG00000118961|Q9H6V9-2|LDAH;nc|ENSG00000118961|Q9H6V9-3|LDAH 77.98433622928108 0.0180125044636492 1 EE{I|L}PNTHAA{M(Oxidation (M))|F} 10 4 + 55.035 0.0 0.0 4.8811 4.8811 76.75 0.0 0.0 0.0 5.3911789001081445 2.916928791707676 2.916928791707676 2.916928791707676 0 0.5 1.6989700043360187 1.075257498915995 0.0 EE{I|L}PNTHAA{M(Oxidation (M))|F};EEHVP{M(Oxidation (M))|F}{I|L}EE;EEHVP{I|L}{M(Oxidation (M))|F}EE;EEH{M(Oxidation (M))|F}[{I|L}T]{I|L}[HC];EEH[{I|L}T]{M(Oxidation (M))|F}{I|L}[HC];EE{I|L}PNSG[HV]{M(Oxidation (M))|F};EEH{M(Oxidation (M))|F}VP{I|L}EE;EE{I|L}PGGTHAA{M(Oxidation (M))|F};EEHV[YV]{I|L}[HC];EE{I|L}PEE[HV]{M(Oxidation (M))|F} 4.8811;4.6224;4.5579;4.4029;4.3912;4.1259;4.0704;4.0683;4.025;3.9985 -;-;-;-;-;-;-;-;-;- 2032 + 1 2.166 140077.1 1.0 3468 3466 6929 DOHH2_400M_050219_1,6936 DOHH2_400M_050219_1,6936,EEIPVHEEF True True EEIPVHEEF 38.513506 564.763903796673 2691954.75 6929.0 ENSG00000118961|ENST00000237822|LDAH;;nc|ENSG00000118961|Q9H6V9-2|LDAH;;nc|ENSG00000118961|Q9H6V9-3|LDAH 6.435709635416667 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6937 38.518 265.0 413080.0 25 0 20771.0 + 2527 ASDPFFRHY 9 139 380.5140200167682 1138.5202306505046 3 380.5135681033134 MULTI CID FTMS 0 0 0 6929 184335.34375 0.5065503319648952 -1 0.0190238952636718 8 Unmodified _ASDPFFRHY_ ENSG00000142751|ENST00000374135|GPN2;ENST00000477418.2_1_1:27206170-27212721:-|nuORF 26.88365393820708 0.1891292719743517 1 [R{M(Oxidation (M))|F}][NG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}P 7 7 37.267 0.0 0.0 3.2733 0.0 0.0 0.0 270.07372317203345 270.07372317203345 18.125466655011945 0.0 0.0 0.0 0 0.0 2.0 0.0 0.7302046884880937 [R{M(Oxidation (M))|F}][NG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}P 3.2733 - 341 1 2.166 91689.3 1.0 3469 3466 6929 DOHH2_400M_050219_1,6937 DOHH2_400M_050219_1,6937,ASDPFFRHY False True ASDPFFRHY 38.518404 380.513568103313 2605508.5 6929.0 ENSG00000142751|ENST00000374135|GPN2;;ENST00000477418.2_1_1:27206170-27212721:-|nuORF 7.5119560559590655 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6938 38.523 269.0 274220.0 25 0 21086.0 + 532 AEIDEPNAF 9 122 503.2296734535224 1004.4447939738448 2 503.2294799685478 MULTI CID FTMS 0 0 0 6929 183625.84375 1.0 0 0.0 9 Unmodified _AEIDEPNAF_ ENSG00000139645|ENST00000267116|ANKRD52 28.486842064014134 0.1687311288560894 1 {NN|[MP]|[D{I|L}]|[EV]}EAE 5 5 15.807 0.0 0.0 1.5737 0.0 0.0 0.0 444.18799400730114 444.18799400730114 4.837513372786479 0.0 0.0 0.0 0 0.4247425010840047 0.7958800173440752 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}EAE 1.5737 - 190 1 2.166 61858.4 1.0 3470 3466 6929 DOHH2_400M_050219_1,6938 DOHH2_400M_050219_1,6938,AEIDEPNAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6939 38.529 313.0 198010.0 25 0 27352.0 + 12521 GVFVPIIW 8 108 465.7777938128479 0 465.7776977419853 PEAK CID FTMS 0 0 0 6929 161611.984375 0.7726287950957725 -1 0.0190238952636718 10 Unmodified _GVFVPIIW_ REV__ENSG00000103257|ENST00000261622|SLC7A5 2.889219685676258 0.5898224805723975 1 K 1 -1 1.5938 0.0 0.0 0.17146 0.0 0.0 603.3485125751114 195.06687341861564 798.415385993727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.17146 - 2 + 1 2.166 52337.3 1.0 3471 3466 6929 DOHH2_400M_050219_1,6939 DOHH2_400M_050219_1,6939,GVFVPIIW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6940 38.534 261.0 375700.0 25 0 17083.0 + -1 NEKAPVDFGY 10 135 569.2724868476649 568.2652103810649 1 570.2707397341728 MULTI CID FTMS 0 0 0 6929 146405.40625 0.4576074328768563 -1 0.0190238952636718 11 nc|ENSG00000184640|Q9UHD8-3|SEPTIN9;ENST00000592481.5_1_17:75447336-75492345:+|nuORF;ENSG00000184640|ENST00000427177|SEPTIN9;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9;nc|ENSG00000184640|Q9UHD8-4|SEPTIN9;nc|ENSG00000184640|Q9UHD8-8|SEPTIN9;nc|ENSG00000184640|Q9UHD8-9|SEPTIN9 1 {I|L}GY 3 -1 20.177 0.0 0.0 3.5507 0.0 0.0 217.08523098828988 0.0 217.08523098828988 0.0 2.4561303784624755 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}GY 3.5507 - 108 + 1 2.166 78647.5 1.0 3472 3466 6929 DOHH2_400M_050219_1,6940 DOHH2_400M_050219_1,6940, False False NEKAPVDFGY 38.533914 570.270739734173 1921536.375 6929.0 nc|ENSG00000184640|Q9UHD8-3|SEPTIN9;;ENST00000592481.5_1_17:75447336-75492345:+|nuORF;;ENSG00000184640|ENST00000427177|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-4|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-8|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-9|SEPTIN9 3.4470578829447427 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6941 38.548 800.0 194700.0 25 0 12244.0 + -1 HNLLEGGQEDFESS 14 161 781.3424417146947 1560.6703304961893 2 781.8436157107353 MULTI CID FTMS 0 0 0 6929 145615.0 0.486582454970802 -1 0.0190238952636718 12 Oxidation (M) _EDFREEM(Oxidation (M))WTFR_ ENSG00000171403|ENST00000246662|KRT9;P35527 9.38312468134398 0.8308777417566128 1 [HN]{I|L}{I|L}EGGQEDME 12 -1 69.071 0.0 0.0 4.4257 0.0 0.0 0.0 205.0652028929268 205.0652028929268 38.56420801002299 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 1.5044321917401078 [HN]{I|L}{I|L}EGGQEDME 4.4257 - 5932 1 2.166 110700.5 0.6800000071525574 3473 3466 6929 DOHH2_400M_050219_1,6941 DOHH2_400M_050219_1,6941,EDFREEMWTFR False False HNLLEGGQEDFESS 38.547762 781.3426 2154316.0 6929.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 8.648296038309732 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6942 38.554 269.0 290460.0 25 0 53043.0 + 2106 APSPRPLSL 9 87 469.2773509532475 936.540148973295 2 469.2768127322197 MULTI CID FTMS 0 0 0 6929 124992.84375 0.7877419934243411 1 -0.0994834899902343 13 Unmodified _APSPRPLSL_ ENSG00000161091|ENST00000355415|MFSD12;nc|ENSG00000161091|Q6NUT3-2|MFSD12;nc|ENSG00000161091|Q6NUT3-3|MFSD12;nc|ENSG00000161091|Q6NUT3-4|MFSD12 27.628801355627647 0.1796483985696185 1 APS 3 6 54.253 0.0 0.0 5.7929 0.0 0.0 0.0 678.3943194250664 678.3943194250664 35.300084529637985 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + APS 5.7929 + + 113 + 1 2.166 64852.9 1.0 3474 3466 6929 DOHH2_400M_050219_1,6942 DOHH2_400M_050219_1,6942,APSPRPLSL False True APSPRPLSL 38.553904 469.27681273222 1086643.625 6929.0 nc|ENSG00000161091|Q6NUT3-3|MFSD12;;nc|ENSG00000161091|Q6NUT3-2|MFSD12;;ENSG00000161091|ENST00000355415|MFSD12;;nc|ENSG00000161091|Q6NUT3-4|MFSD12 5.358572642008464 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6943 38.568 800.0 95163.0 25 0 3733.2 + -1 NMDRKEMLKYM 11 99 745.8426237636461 1489.670694594092 2 745.8434326052666 MULTI CID FTMS 0 0 0 6929 88135.953125 1.0 0 0.0 14 2 Oxidation (M) _NMDRKEM(Oxidation (M))LKYM(Oxidation (M))_ REV__ENSG00000164307|ENST00000443439|ERAP1;REV__ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;REV__nc|ENSG00000164307|Q9NZ08-2|ERAP1 11.494710602746466 0.7960433852372589 1 [MN]PN{I|L}NA{[{M(Oxidation (M))|F}C]|[YS]}AVD 12 -1 57.573 0.0 0.0 3.8648 0.0 0.0 0.0 197.0935000055297 197.0935000055297 35.067471082249995 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.8807196863200843 0.4247425010840047 [MN]PN{I|L}NA{[{M(Oxidation (M))|F}C]|[YS]}AVD 3.8648 - 1101 + 1 2.166 57799.9 0.4900000095367431 3475 3466 6929 DOHH2_400M_050219_1,6943 DOHH2_400M_050219_1,6943,NMDRKEMLKYM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6944 38.582 800.0 126960.0 25 0 11590.0 -1 0 103 603.967411717614 1808.880405753042 3 603.9678222537041 MULTI CID FTMS 0 0 0 6929 71118.9375 0.0350694996197501 -9 0.9103279113769532 15 1 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 6 -1 49.954 0.0 0.0 2.7616 0.0 0.0 1095.489485238097 0.0 1095.489485238097 0.0 25.059034764951846 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 2.7616 - 195 1 2.166 78456.8 0.4600000083446502 3476 3466 6929 DOHH2_400M_050219_1,6944 DOHH2_400M_050219_1,6944, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6946 38.587 71.0 690460.0 25 0 117940.0 + 24481 MIEPRTLQY 9 63 575.7997754924628 1149.5849980517255 2 575.8000366091728 MULTI CID FTMS 0 0 0 6945 582309.75 0.0148087867455465 5 -0.5425567626953125 1 Unmodified _MIEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 28.23362336080872 0.1719529537093671 1 M{I|L}E 3 6 54.253 0.0 0.0 4.7193 0.0 0.0 0.0 773.3952797827648 773.3952797827648 31.064921830680703 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + M{I|L}E 4.7193 + + 31 + 1 2.17 42448.3 1.0 3477 3467 6945 DOHH2_400M_050219_1,6946 DOHH2_400M_050219_1,6946,MIEPRTLQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6947 38.59 149.0 322200.0 25 0 17235.0 + 18958 LDEKRVTM 8 86 496.26549723312274 990.5164415330456 2 496.2659179568291 MULTI CID FTMS 0 0 0 6945 146772.0 0.2541012316111249 3 -0.3025627136230469 2 Unmodified _LDEKRVTM_ REV__ENSG00000169258|ENST00000303991|GPRIN1;REV__nc|ENSG00000169258|Q7Z2K8-2|GPRIN1 20.453626601364224 0.6087503291685402 1 TVTM 4 -1 36.714 0.0 0.0 3.7066 0.0 0.0 540.3042469709 0.0 540.3042469709 0.0 20.939491060230253 0.0 0.0 0 0.8807196863200843 0.0 0.5 0.0 TVTM 3.7066 - 57 1 2.17 44438.6 1.0 3478 3467 6945 DOHH2_400M_050219_1,6947 DOHH2_400M_050219_1,6947,LDEKRVTM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6948 38.591 36.0 1580300.0 25 0 175650.0 + 36800 TEIDDTKVF 9 96 534.2663908134745 1066.5182286937488 2 534.2664062380791 MULTI CID FTMS 0 0 0 6945 1276020.125 0.7577228915698423 -1 0.0994834899902343 3 Unmodified _TEIDDTKVF_ ENSG00000100592|ENST00000360909|DAAM1;nc|ENSG00000100592|Q9Y4D1-3|DAAM1;nc|ENSG00000100592|Q9Y4D1|DAAM1 32.78568957990786 0.1150597335874693 1 {[ET]|[MV]}{I|L}DDTKV{M(Oxidation (M))|F} 9 0 + 37.278 0.0 0.0 3.4953 3.4953 84.146 0.0 0.0 0.0 5.898255349109512 10.578278345927224 5.898255349109512 37.278062751818986 0 0.4247425010840047 0.0 0.0 0.0 + + {[ET]|[MV]}{I|L}DDTKV{M(Oxidation (M))|F} 3.4953 + + 347 + 1 2.17 49620.1 1.0 3479 3467 6945 DOHH2_400M_050219_1,6948 DOHH2_400M_050219_1,6948,TEIDDTKVF True True TEIDDTKVF 38.591272 534.266406238079 18729784.0 6945.0 nc|ENSG00000100592|Q9Y4D1-3|DAAM1;;nc|ENSG00000100592|Q9Y4D1|DAAM1;;ENSG00000100592|ENST00000360909|DAAM1 5.911466280619304 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6949 38.593 103.0 546150.0 25 0 92544.0 6214 DTLILALQ 8 105 443.7646912314235 885.514829529647 2 443.7645141482353 MULTI CID FTMS 0 0 0 6945 552866.0625 0.9139671859191812 -3 0.1931190490722656 4 Unmodified _DTLILALQ_ ENST00000563168.1_1_16:67262364-67262535:+|nuORF 5.230669730166228 0.792582437072536 1 {I|L} 1 7 9.2082 0.0 0.0 1.0399 0.0 0.0 754.4199941798408 0.0 754.4199941798408 0.0 8.494850021680092 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0399 + + 19 + 1 2.17 48670.8 1.0 3480 3467 6945 DOHH2_400M_050219_1,6949 DOHH2_400M_050219_1,6949,DTLILALQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6950 38.596 104.0 779020.0 25 0 107490.0 + 9744 FMKPGKVVL 9 96 509.8097247099855 1017.6048964867708 2 509.8097411990166 MULTI CID FTMS 0 0 0 6945 465092.1875 0.248150958189716 -2 0.1185073852539062 5 Unmodified _FMKPGKVVL_ ENSG00000131469|ENST00000253788|RPL27;ENST00000587478.1_1_17:41150475-41150953:+|nuORF;ENST00000593262.1_1_17:41150683-41150953:+|nuORF 46.020951573049366 0.0490941689151868 1 PK{M(Oxidation (M))|F}{I|L} 4 6 30.904 0.0 0.0 3.0369 0.0 0.0 514.34868056465 0.0 514.34868056465 0.0 2.108637725143076 0.0 0.0 0 0.5866968715561641 0.0 0.0 0.0 PK{M(Oxidation (M))|F}{I|L} 3.0369 - 350 1 2.17 64965.4 1.0 3481 3467 6945 DOHH2_400M_050219_1,6950 DOHH2_400M_050219_1,6950,FMKPGKVVL True True FMKPGKVVL 38.595674 509.809741199017 24412770.0 6945.0 ENSG00000131469|ENST00000253788|RPL27;;ENST00000593262.1_1_17:41150683-41150953:+|nuORF;;ENST00000587478.1_1_17:41150475-41150953:+|nuORF 5.578414440155029 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6951 38.599 152.0 417190.0 25 0 73843.0 + 31513 RQGNKPIT 8 94 457.2645569022711 912.5145608713422 2 457.2644225955009 MULTI CID FTMS 0 0 0 6945 388061.3125 0.6385268690645691 4 -0.4332389831542969 6 Unmodified _RQGNKPIT_ REV__ENSG00000031081|ENST00000264245|ARHGAP31 4.75600775471527 0.7954636275367004 1 {[NV]|[RG]}[TP][RD]V{I|L} 8 -1 {[NV]|[RG]}[TP][RD]V + + 10.379 -17.078 -2.1855 1.1374 1.1374 48.382 0.0 0.0 0.0 0.0 -10.590496560389973 -10.590496560389973 0.0 0 0.0 0.0 0.0 0.0 {[NV]|[RG]}[TP][RD]V{I|L} 1.1374 - 18 + 1 2.17 52849.8 1.0 3482 3467 6945 DOHH2_400M_050219_1,6951 DOHH2_400M_050219_1,6951,RQGNKPIT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6952 38.601 127.0 562860.0 25 0 48486.0 + 18054 KTDLDLDGY 9 107 520.2513798918826 1038.4882068505651 2 520.2513305544853 MULTI CID FTMS 0 0 0 6945 355220.875 0.5378336019882928 -1 0.0994834899902343 7 Unmodified _KTDLDLDGY_ ENSG00000127527|ENST00000455140|EPS15L1;nc|ENSG00000127527|Q9UBC2-3|EPS15L1;nc|ENSG00000127527|Q9UBC2-4|EPS15L1;nc|ENSG00000127527|Q9UBC2|EPS15L1 55.50274090549119 0.0285720310785888 1 {NN|[MP]|[D{I|L}]|[EV]}TKD{I|L}DGY 9 4 + 76.124 0.0 0.0 7.3303 7.3303 84.937 0.0 0.0 0.0 3.049785624597888 16.478174818886373 3.049785624597888 3.049785624597888 0 1.0 1.2218487496163564 1.2302046884880935 0.0 {NN|[MP]|[D{I|L}]|[EV]}TKD{I|L}DGY;[KT]D{I|L}D{I|L}DGY;{NN|[MP]|[D{I|L}]|[EV]}DTK{I|L}DGY;{NN|[MP]|[D{I|L}]|[EV]}TDK{I|L}DGY;{[TV]|[{I|L}S]}[SG]{I|L}D{I|L}DGY;{[TV]|[{I|L}S]}EKD{I|L}DGY;{[TV]|[{I|L}S]}EDK{I|L}DGY;{NN|[MP]|[D{I|L}]|[EV]}TKD[DG]{I|L}Y;[KT]D{I|L}D[DG]{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}TKD{[RE]|[WV]}Y 7.3303;7.0366;6.9654;6.4619;6.25;6.1694;5.301;4.6767;4.383;4.3427 -;+;-;-;-;-;-;-;-;- + 525 1 2.17 59244.3 1.0 3483 3467 6945 DOHH2_400M_050219_1,6952 DOHH2_400M_050219_1,6952,KTDLDLDGY True True KTDLDLDGY 38.601307 520.251330554485 3650769.5 6945.0 ENSG00000127527|ENST00000455140|EPS15L1;;nc|ENSG00000127527|Q9UBC2-4|EPS15L1;;nc|ENSG00000127527|Q9UBC2-3|EPS15L1;;nc|ENSG00000127527|Q9UBC2|EPS15L1 5.418712933858235 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6953 38.615 800.0 338760.0 25 0 33106.0 15150 INYEDFWLS 9 174 593.7722255486871 1185.529898164174 2 593.7721435427666 MULTI CID FTMS 0 0 0 6945 221916.921875 0.4035341951650052 -2 0.1185073852539062 8 Unmodified _INYEDFWLS_ ENST00000443565.1_1_1:81107007-81112255:+|nuORF 29.081581746732265 0.1611639662936252 1 {[WS]|[C(Carbamidomethyl (C)){I|L}]}H{M(Oxidation (M))|F}HSWS{I|L} 9 7 + 51.601 0.0 0.0 4.3526 4.3526 78.562 0.0 0.0 0.0 6.396844398323978 17.76515853243602 6.396844398323978 6.396844398323978 0 1.048455006504028 1.0969100130080565 1.2302046884880935 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}H{M(Oxidation (M))|F}HSWS{I|L};[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E]ATSWS{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}H{M(Oxidation (M))|F}HS{[SA]|[TG]}D{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}H{M(Oxidation (M))|F}HS{[DA]|[EG]}S{I|L};[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WS{I|L};[{M(Oxidation (M))|F}V][DV]PHS{[SA]|[TG]}D{I|L};[{M(Oxidation (M))|F}V][DV]PHS{[DA]|[EG]}S{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}H[RV][C(Carbamidomethyl (C))N]D{I|L};[YE]{[ET]|[MV]}ATSWS{I|L};[{M(Oxidation (M))|F}V]T[YR]{[DA]|[EG]}DS{I|L} 4.3526;3.813;3.6201;3.5759;2.9936;2.8625;2.8184;2.2421;2.1594;1.8392 -;-;-;-;-;-;-;-;-;- 1169 1 2.17 201193.2 0.959999978542328 3484 3467 6945 DOHH2_400M_050219_1,6953 DOHH2_400M_050219_1,6953,INYEDFWLS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6954 38.622 383.0 252200.0 25 0 30149.0 + 14596 IIDNSQGFY 9 125 528.7533291136946 0 528.7528564333916 PEAK CID FTMS 0 0 0 6945 188911.328125 1.0 0 0.0 9 Unmodified _IIDNSQGFY_ ENSG00000135069|ENST00000376588|PSAT1;nc|ENSG00000135069|Q9Y617-2|PSAT1 37.97399986684836 0.0716774499419844 1 M{I|L}{[QG]|[NA]}SA 6 6 21.432 0.0 0.0 2.0305 0.0 0.0 197.0920331279765 268.0904235687958 465.1824566967724 0.0 0.0 0.0 0.0 0 0.5 0.0 0.7302046884880937 1.0 M{I|L}{[QG]|[NA]}SA 2.0305 - 324 + 1 2.17 76567.0 1.0 3485 3467 6945 DOHH2_400M_050219_1,6954 DOHH2_400M_050219_1,6954,IIDNSQGFY True True IIDNSQGFY 38.622014 528.752856433392 1195982.875 6945.0 ENSG00000135069|ENST00000376588|PSAT1;;nc|ENSG00000135069|Q9Y617-2|PSAT1 4.098796129226685 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6955 38.627 269.0 367280.0 25 0 40004.0 + 27484 PKGPPCLQ 8 145 420.2267769025909 838.4390008719819 2 420.2267333865166 MULTI CID FTMS 0 0 0 6945 185084.953125 0.8129218442055874 5 -0.5425567626953125 10 Unmodified _PKGPPCLQ_ REV__ENSG00000165584|ENST00000298396|SSX3;REV__nc|ENSG00000165584|Q99909-2|SSX3;REV__nc|ENSG00000290708|Q7RTT3|SSX9P 2.302733041254933 0.8103549651115762 1 {I|L} 1 -1 8.8735 0.0 0.0 1.0583 0.0 0.0 707.3439518991288 0.0 707.3439518991288 0.0 4.092072152004494 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0583 + + 19 + 1 2.17 80193.6 1.0 3486 3467 6945 DOHH2_400M_050219_1,6955 DOHH2_400M_050219_1,6955,PKGPPCLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6956 38.631 232.0 560500.0 25 0 88963.0 + 37068 TGIARVPL 8 155 413.7611497656292 825.5077465980584 2 413.7624999880791 MULTI CID FTMS 0 0 0 6945 136985.921875 0.1504427225188676 -2 0.1185073852539062 11 Unmodified _TGIARVPL_ ENSG00000125835|ENST00000381342|SNRPB;ENSG00000128739|ENST00000390687|SNRPN;nc|ENSG00000125835|P14678-3|SNRPB;nc|ENSG00000125835|P14678|SNRPB;nc|ENSG00000128739|P63162-2|SNRPN 36.12702656103203 0.299085846329477 1 TG{I|L}ARVP{I|L} 8 0 + 57.898 0.0 0.0 7.0136 7.0136 82.688 0.0 0.0 0.0 24.863876595172805 2.05761929722901 2.05761929722901 2.05761929722901 0 1.4489700043360187 1.2218487496163564 0.0 0.0 + + TG{I|L}ARVP{I|L};TG{I|L}ARV{I|L}P;TGVR[{I|L}A]P{I|L};TGVR[{I|L}A]{I|L}P;{[SA]|[TG]}{I|L}ARVP{I|L};TG{I|L}[RP]{[VA]|[{I|L}G]}{I|L};{[SA]|[TG]}{I|L}[{I|L}V]A[RP];{[QV]|[N{I|L}]|[RA]|[KV]}VATVP{I|L};{[VA]|[{I|L}G]}RATVP{I|L};T{I|L}{I|L}RNP{I|L} 7.0136;6.7644;5.2361;4.9868;4.0017;3.7734;3.1706;2.1694;2.1691;2.0106 +;-;-;-;+;-;-;-;-;- + 463 + 1 2.17 105023.3 1.0 3487 3467 6945 DOHH2_400M_050219_1,6956 DOHH2_400M_050219_1,6956,TGIARVPL False True TGIARVPL 38.631328 413.762499988079 10235882.0 6945.0 nc|ENSG00000125835|P14678-3|SNRPB;;ENSG00000128739|ENST00000390687|SNRPN;;nc|ENSG00000125835|P14678|SNRPB;;ENSG00000125835|ENST00000381342|SNRPB;;nc|ENSG00000128739|P63162-2|SNRPN 3.3927578131357827 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6957 38.638 385.0 310810.0 25 0 32892.0 26073 NNAKGVPR 8 142 428.24290051885913 854.4712481045183 2 428.2432739138603 MULTI CID FTMS 0 0 0 6945 136200.953125 0.5673466951674464 6 -0.6182136535644531 12 Unmodified _NNAKGVPR_ ENST00000358912.4_1_2:64335433-64371452:-|nuORF 5.230669730166228 0.792582437072536 1 P 1 7 8.2879 0.0 0.0 0.96994 0.0 0.0 739.4073118025636 0.0 739.4073118025636 0.0 -0.0398446483563788 -0.0398446483563788 0.0 0 0.0 0.0 0.0 0.0 + P 0.96994 + + 29 + 1 2.17 94630.6 1.0 3488 3467 6945 DOHH2_400M_050219_1,6957 DOHH2_400M_050219_1,6957,NNAKGVPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6958 38.653 800.0 172600.0 25 0 16757.0 + 44127 YLDKGILKY 9 150 556.8212316023811 1111.627910271562 2 556.8209716677666 MULTI CID FTMS 0 0 0 6945 114280.9765625 0.9325257841318768 -1 0.0994834899902343 13 Unmodified _YLDKGILKY_ ENSG00000070882|ENST00000313367|OSBPL3;nc|ENSG00000070882|Q9H4L5-2|OSBPL3;nc|ENSG00000070882|Q9H4L5-3|OSBPL3;nc|ENSG00000070882|Q9H4L5-4|OSBPL3;nc|ENSG00000070882|Q9H4L5-5|OSBPL3;nc|ENSG00000070882|Q9H4L5-6|OSBPL3;nc|ENSG00000070882|Q9H4L5-7|OSBPL3;nc|ENSG00000070882|Q9H4L5-8|OSBPL3;OSBPL3|p.R837Kfs*6|1|0.48|ENSG00000070882|chr7:24804369-24804372|TCTC/-|frameshift_variant 74.19965305603844 0.0194755241623067 1 Y{I|L}DKG{I|L}{I|L}KY 9 0 + 90.931 0.0 0.0 8.18 8.18 90.364 0.0 0.0 0.0 60.29143319936422 14.973024840566469 14.973024840566469 7.257724967479859 0 2.281718309096375 2.0 0.7302046884880937 0.0 + + Y{I|L}DKG{I|L}{I|L}KY;{I|L}YDKG{I|L}{I|L}KY;Y{I|L}TK[PS]{I|L}KY;Y{I|L}TAAG{I|L}{I|L}KY;Y{I|L}DKG{I|L}{I|L}YK;{I|L}YTK[PS]{I|L}KY;[Y{I|L}]DKG{I|L}{I|L}KY;{I|L}YTAAG{I|L}{I|L}KY;{I|L}YDKG{I|L}{I|L}YK;Y{I|L}DKG{I|L}KY{I|L} 8.18;7.5271;6.9111;6.7883;6.7271;6.2582;6.14;6.1354;6.0742;5.7496 +;-;-;-;-;-;+;-;-;- + 2534 + 1 2.17 107365.3 0.7200000286102295 3489 3467 6945 DOHH2_400M_050219_1,6958 DOHH2_400M_050219_1,6958,YLDKGILKY True True YLDKGILKY 38.65324 556.820971667767 1125990.0 6945.0 nc|ENSG00000070882|Q9H4L5-6|OSBPL3;;nc|ENSG00000070882|Q9H4L5-4|OSBPL3;;nc|ENSG00000070882|Q9H4L5-5|OSBPL3;;nc|ENSG00000070882|Q9H4L5-2|OSBPL3;;nc|ENSG00000070882|Q9H4L5-3|OSBPL3;;nc|ENSG00000070882|Q9H4L5-7|OSBPL3;;OSBPL3|p.R837Kfs*6|1|0.48|ENSG00000070882|chr7:24804369-24804372|TCTC/-|frameshift_variant;;nc|ENSG00000070882|Q9H4L5-8|OSBPL3;;ENSG00000070882|ENST00000313367|OSBPL3 6.112587292989095 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6959 38.667 800.0 115150.0 25 0 4253.5 + -1 TMEKSDLEMQYETL 14 134 875.3808798571313 1748.7472067810625 2 875.3821288943291 MULTI CID FTMS 0 0 0 6945 99185.71875 0.5593691880030602 -1 0.0994834899902343 14 Acetyl (Protein N-term),3 Carbamidomethyl (C) _(Acetyl (Protein N-term))LC(Carbamidomethyl (C))WQPWRRWC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENSG00000171403|ENST00000246662|KRT9;P35527 0.0 0.8751479354844584 1 [YE]T{I|L}QWE{M(Oxidation (M))|F}QYET{I|L} 13 -1 + 103.39 0.0 0.0 5.9122 5.9122 84.097 0.0 0.0 0.0 10.45880017344075 15.740312677277188 10.45880017344075 6.197887582883936 0 1.110924374808178 1.0 1.9876954943324543 0.0 [YE]T{I|L}QWE{M(Oxidation (M))|F}QYET{I|L};[YE]T[WQ]{I|L}E{M(Oxidation (M))|F}QYET{I|L};[YE]TE{[QG]|[NA]}{I|L}E{M(Oxidation (M))|F}QYET{I|L};[YE]T{I|L}[AG]WE{M(Oxidation (M))|F}QYET{I|L};[YE]T[QA]D{I|L}E{M(Oxidation (M))|F}QYET{I|L};[YE]T{I|L}QWE{M(Oxidation (M))|F}[AG]YET{I|L};[YE]T{I|L}Q{[DA]|[EG]}E{M(Oxidation (M))|F}QYET{I|L};{[ET]|[MV]}Y{I|L}QWE{M(Oxidation (M))|F}QYET{I|L};[{I|L}T]EYQWE{M(Oxidation (M))|F}QYET{I|L};{[ET]|[MV]}{M(Oxidation (M))|F}KSD{I|L}E{M(Oxidation (M))|F}QYET{I|L} 5.9122;5.5578;5.5393;5.3934;5.3934;5.3934;5.3934;5.3141;5.2323;5.0853 -;-;-;-;-;-;-;-;-;- 10709 1 2.17 65011.2 0.5099999904632568 3490 3467 6945 DOHH2_400M_050219_1,6959 DOHH2_400M_050219_1,6959,LCWQPWRRWCC False False TMEKSDLEMQYETL 38.66709 875.382128894329 1588403.0 6945.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 9.76682154337565 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6960 38.67 167.0 482690.0 25 0 66880.0 + 29049 QEIDGKSLL 9 111 501.777439792407 1001.540326651614 2 501.7774841189384 MULTI CID FTMS 0 0 0 6945 94903.0703125 0.1503562800778334 -2 0.1185073852539062 15 Unmodified _QEIDGKSLL_ ENSG00000141858|ENST00000533683|SAMD1;ENSG00000203943|ENST00000394834|SAMD13;ENST00000506295.1_2_1:84810518-84815454:+|nuORF;nc|ENSG00000141858|Q6SPF0|SAMD1;nc|ENSG00000203943|Q5VXD3-2|SAMD13;nc|ENSG00000203943|Q5VXD3-3|SAMD13;nc|ENSG00000203943|Q5VXD3|SAMD13 43.77239144664712 0.0547478964384323 1 [QT]AS{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 9 7 + 34.231 0.0 0.0 3.4178 3.4178 69.931 0.0 0.0 0.0 1.2862832210443216 3.612606533048997 1.2862832210443216 1.2862832210443216 0 0.4247425010840047 0.0 0.8556270500406937 0.2887254899964357 [QT]AS{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{[TV]|[{I|L}S]}[KG]D{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}D{I|L}[KG]S{I|L};[KG]DS{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DG[K{I|L}]S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DG[KS]{I|L}{I|L};[KG]{I|L}SD{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}PT[KS][QT]{I|L};[DP]{I|L}T[KS][QT]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[{I|L}T]GRW 3.4178;3.2894;3.0571;2.8685;2.6211;2.5416;1.8625;1.4872;1.2841;0.86365 -;-;-;-;-;+;-;-;-;- + 404 1 2.17 64425.6 1.0 3491 3467 6945 DOHH2_400M_050219_1,6960 DOHH2_400M_050219_1,6960,QEIDGKSLL True True QEIDGKSLL 38.670348 501.777484118938 3695974.0 6945.0 nc|ENSG00000203943|Q5VXD3-3|SAMD13;;ENST00000506295.1_2_1:84810518-84815454:+|nuORF;;nc|ENSG00000203943|Q5VXD3|SAMD13;;ENSG00000203943|ENST00000394834|SAMD13;;nc|ENSG00000203943|Q5VXD3-2|SAMD13;;ENSG00000141858|ENST00000533683|SAMD1;;nc|ENSG00000141858|Q6SPF0|SAMD1 4.452572266260783 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6961 38.685 800.0 22518.0 25 0 2270.9 + 31725 RRRRRWKRTYM 11 40 832.9823486208916 0 832.9823486208916 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _RRRRRWKRTYM_ REV__ENST00000306085.10_3_7:100730337-100730388:+|nuORF 0.0 0.4761840153648598 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.17 21434.9 0.4900000095367431 3492 3467 6945 DOHH2_400M_050219_1,6961 DOHH2_400M_050219_1,6961,RRRRRWKRTYM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6963 38.69 8.3 5952600.0 25 0 668350.0 + -1 ASDRNIVLY 9 62 525.7827146691898 1049.5508764051797 2 525.7831909060478 MULTI CID FTMS 0 0 0 6962 5627937.5 0.5134912004805776 1 -0.09027099609375 1 Oxidation (M) _IVEGM(Oxidation (M))PLLY_ ENSG00000164934|ENST00000612750|DCAF13 16.942295170755138 0.3780752226737986 1 N{I|L}V{I|L}Y 5 -1 47.959 0.0 0.0 4.5695 0.0 0.0 429.1991139142594 0.0 429.1991139142594 0.0 36.98970004336019 0.0 0.0 0 1.0 0.0 0.0 0.0 N{I|L}V{I|L}Y 4.5695 - 19 1 2.17 46278.4 1.0 3493 3468 6962 DOHH2_400M_050219_1,6963 DOHH2_400M_050219_1,6963,IVEGMPLLY False False ASDRNIVLY 38.690155 525.783190906048 192286896.0 6962.0 ENSG00000164934|ENST00000612750|DCAF13 6.623839060465495 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6964 38.695 287.0 137720.0 25 0 8883.5 29383 QLADAKQCVQF 11 71 625.813694281041 1249.6128356288818 2 625.8137084841728 MULTI CID FTMS 0 0 0 6962 151004.109375 0.2308994665660268 2 -0.198760986328125 2 Unmodified _QLADAKQCVQF_ ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43-13|PDE4DIP;nc|ENSG00000178104|Q5VU43-2|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;nc|ENSG00000178104|Q5VU43-6|PDE4DIP;nc|ENSG00000178104|Q5VU43-7|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP 13.614867670302877 0.751941774060705 1 [RH]MAGA[K{I|L}]GY{M(Oxidation (M))|F} 11 8 + 40.182 0.0 0.0 3.2155 3.2155 70.668 0.0 0.0 0.0 5.901673145250577 2.2184874961635543 2.2184874961635543 2.2184874961635543 0 0.3494850021680094 0.0 0.0 0.4247425010840047 [RH]MAGA[K{I|L}]GY{M(Oxidation (M))|F};[RH]MAGA[K{I|L}]G{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AG[K{I|L}]AGAMQ{M(Oxidation (M))|F};[RH]MQA[K{I|L}]GY{M(Oxidation (M))|F};[RH]MAQ[K{I|L}]GY{M(Oxidation (M))|F};[Q{I|L}]K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AGAMQ{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q[K{I|L}]AGAMQ{M(Oxidation (M))|F};[RH]MQA[K{I|L}]G{M(Oxidation (M))|F}Y;[RH]MAQ[K{I|L}]G{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AGRRGAMQ{M(Oxidation (M))|F} 3.2155;3.038;2.7433;2.6893;2.6893;2.6347;2.5572;2.5118;2.5118;2.455 -;-;-;-;-;-;-;-;-;- 244 + 1 2.17 35912.5 1.0 3494 3468 6962 DOHH2_400M_050219_1,6964 DOHH2_400M_050219_1,6964,QLADAKQCVQF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6965 38.697 62.0 992110.0 25 0 170110.0 + 27480 PKGPGPLA 8 85 368.72049355588143 735.4264341785629 2 368.7199890017509 MULTI CID FTMS 0 0 0 6962 957806.125 0.6036512061602534 -1 0.1038017272949218 3 Unmodified _PKGPGPLA_ REV__ENST00000519574.1_1_2:219125758-219128073:+|nuORF;REV__ENST00000566665.1_1_16:10273773-10274277:-|nuORF 0.6903765706972694 0.8201419426409876 1 W 1 -1 0.088644 0.0 0.0 0.012053 0.0 0.0 463.3088327154754 83.0145510309203 546.3233837463956 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.012053 - 2 + 1 2.17 53759.5 1.0 3495 3468 6962 DOHH2_400M_050219_1,6965 DOHH2_400M_050219_1,6965,PKGPGPLA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6966 38.7 153.0 446570.0 25 0 78142.0 + + -1 ETDLSIPTSPTSKY 14 69 769.8833211561883 0 769.8834106326103 PEAK CID FTMS 0 0 0 6962 363145.0 0.705753499466979 -1 0.1038017272949218 4 Carbamidomethyl (C) _RTQC(Carbamidomethyl (C))LREVWYQ_ nc|ENSG00000185480|Q9NWS1-2|PARPBP;nc|ENSG00000185480|Q9NWS1-7|PARPBP;ENST00000541668.5_1_12:102514215-102548625:+|nuORF;nc|ENSG00000185480|Q9NWS1-3|PARPBP;nc|ENSG00000185480|Q9NWS1-6|PARPBP;ENSG00000185480|ENST00000327680|PARPBP 7.101721422024254 0.47618401536486 1 D{I|L}S{I|L}PAA{I|L}DTE 11 -1 60.667 0.0 0.0 3.9452 0.0 0.0 230.10425784102296 179.08298669986564 409.1872445408886 0.0 0.0 0.0 0.0 0 1.174742501084005 0.0 1.1989700043360187 0.0 D{I|L}S{I|L}PAA{I|L}DTE 3.9452 - 563 + 1 2.17 52460.3 1.0 3496 3468 6962 DOHH2_400M_050219_1,6966 DOHH2_400M_050219_1,6966,RTQCLREVWYQ False False ETDLSIPTSPTSKY 38.700009 769.88341063261 3518110.75 6962.0 nc|ENSG00000185480|Q9NWS1-2|PARPBP;;nc|ENSG00000185480|Q9NWS1-7|PARPBP;;ENST00000541668.5_1_12:102514215-102548625:+|nuORF;;nc|ENSG00000185480|Q9NWS1-3|PARPBP;;nc|ENSG00000185480|Q9NWS1-6|PARPBP;;ENSG00000185480|ENST00000327680|PARPBP 8.231498082478842 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6967 38.702 112.0 457540.0 25 0 46918.0 + -1 KESYSVYVY 9 78 569.2724868476649 568.2652103810649 1 569.2769653201103 MULTI CID FTMS 0 0 0 6962 345727.0625 1.0 0 0.0 5 ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000275713|ENST00000619466|H2BC9;nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000158373|ENST00000377777|H2BC5;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000197903|ENST00000356950|H2BC12 1 [C(Carbamidomethyl (C))K]VY 4 -1 + 23.188 0.0 0.0 4.0804 4.0804 79.559 0.0 0.0 0.0 5.228787452803374 14.146518864155128 5.228787452803374 8.962505624616384 0 0.0 0.0 0.0 0.0 [C(Carbamidomethyl (C))K]VY;[YV][C(Carbamidomethyl (C))K] 4.0804;2.5032 -;- 43 + 1 2.17 49227.3 1.0 3497 3468 6962 DOHH2_400M_050219_1,6967 DOHH2_400M_050219_1,6967, False False KESYSVYVY 38.702371 569.27696532011 2081095.5 6962.0 ENSG00000203814|ENST00000369167|H2BC18;;ENSG00000233822|ENST00000612898|H2BC15;;ENSG00000277224|ENST00000356530|H2BC7;;ENSG00000234289|ENST00000599962|H2BC12L;;ENSG00000185130|ENST00000377401|H2BC13;;ENSG00000275713|ENST00000619466|H2BC9;;nc|ENSG00000203814|Q5QNW6-2|H2BC18;;ENSG00000158373|ENST00000377777|H2BC5;;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;;ENSG00000273802|ENST00000541790|H2BC8;;ENSG00000274290|ENST00000614097|H2BC6;;ENSG00000273703|ENST00000621112|H2BC14;;ENSG00000278588|ENST00000377733|H2BC10;;ENSG00000180596|ENST00000396984|H2BC4;;ENSG00000197903|ENST00000356950|H2BC12 2.695788582166036 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6968 38.707 245.0 406250.0 25 0 41876.0 + 16725 KEWVTPKEF 9 114 582.308577741949 1162.6026025506978 2 582.3087036013603 MULTI CID FTMS 0 0 0 6962 308331.15625 0.6761615263522224 -1 0.1038017272949218 6 Unmodified _KEWVTPKEF_ ENSG00000143799|ENST00000366794|PARP1 102.5486954659897 0.0096473852560541 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVTPKE{M(Oxidation (M))|F} 9 0 + 92.525 0.0 0.0 7.9585 7.9585 84.945 0.0 0.0 0.0 2.477861090009469 2.477861090009469 2.477861090009469 2.477861090009469 0 2.9802046884880937 0.0 1.4916440611282626 0.8243923658886187 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVTPKE{M(Oxidation (M))|F};KEWVTPKE{M(Oxidation (M))|F};{[RE]|[WV]}TGVTPKE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WTVPKE{M(Oxidation (M))|F};{[RE]|[WV]}TGTVPKE{M(Oxidation (M))|F};{[TV]|[{I|L}S]}GWVTPKE{M(Oxidation (M))|F};{[RE]|[WV]}TRTPKE{M(Oxidation (M))|F};{[VA]|[{I|L}G]}SWVTPKE{M(Oxidation (M))|F};{[RE]|[WV]}EKTPKE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TWVPKE{M(Oxidation (M))|F} 7.9585;7.7453;7.6098;7.1624;6.8137;6.7996;6.7665;6.7315;6.5076;6.2799 +;+;-;-;-;-;-;-;-;- + 2214 1 2.17 79610.7 1.0 3498 3468 6962 DOHH2_400M_050219_1,6968 DOHH2_400M_050219_1,6968,KEWVTPKEF True True KEWVTPKEF 38.706946 582.30870360136 3207029.5 6962.0 ENSG00000143799|ENST00000366794|PARP1 7.768993218739827 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6969 38.71 167.0 540480.0 25 0 39138.0 + 31696 RRNDKIIVF 9 96 387.5684594948267 1159.6835490846802 3 387.5680419802666 MULTI CID FTMS 0 0 0 6962 241700.34375 0.8375996410663655 -1 0.1038017272949218 7 Unmodified _RRNDKIIVF_ ENSG00000163161|ENST00000285398|ERCC3;ENST00000426778.5_1_2:128015174-128051559:-|nuORF 14.95716135407024 0.4318104563536712 1 {[HG]|PP}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{I|L}{I|L}V{M(Oxidation (M))|F} 10 5 + 42.937 0.0 0.0 3.7025 3.7025 84.97 0.0 0.0 0.0 2.9440873258899813 32.452359395051715 2.9440873258899813 42.936909460092 0 0.805462187404089 0.0 0.4247425010840047 0.0 {[HG]|PP}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{I|L}{I|L}V{M(Oxidation (M))|F} 3.7025 - 53 1 2.17 77356.6 1.0 3499 3468 6962 DOHH2_400M_050219_1,6969 DOHH2_400M_050219_1,6969,RRNDKIIVF False True RRNDKIIVF 38.710215 387.568041980267 1788061.375 6962.0 ENST00000426778.5_1_2:128015174-128051559:-|nuORF;;ENSG00000163161|ENST00000285398|ERCC3 5.052318572998047 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6970 38.715 261.0 271920.0 25 0 26872.0 + 43316 WLDRLGESKY 10 104 422.8879368344672 1265.6419811036017 3 422.8873168826103 MULTI CID FTMS 0 0 0 6962 195897.921875 1.0 0 0.0 8 Unmodified _WLDRLGESKY_ ENSG00000111142|ENST00000323666|METAP2;nc|ENSG00000111142|P50579-2|METAP2;nc|ENSG00000111142|P50579-3|METAP2 12.855947597645695 0.6318316972389167 1 W{I|L}[WP]{I|L}[C(Carbamidomethyl (C))R][HV] 9 7 + 45.18 0.0 0.0 3.5697 3.5697 73.892 0.0 0.0 0.0 16.63103304463391 3.858696646399899 3.858696646399899 3.858696646399899 0 0.3807196863200844 1.5228787452803376 0.0 0.0 W{I|L}[WP]{I|L}[C(Carbamidomethyl (C))R][HV];W{I|L}[DV]{[VA]|[{I|L}G]}C(Carbamidomethyl (C)){I|L}KY;W{[QV]|[N{I|L}]|[RA]|[KV]}[RN]C(Carbamidomethyl (C)){I|L}KY 3.5697;3.2648;1.5455 -;-;- 222 + 1 2.17 62908.9 1.0 3500 3468 6962 DOHH2_400M_050219_1,6970 DOHH2_400M_050219_1,6970,WLDRLGESKY False False WLDRLGESKY 38.715046 422.88731688261 1224226.25 6962.0 ENSG00000111142|ENST00000323666|METAP2;;nc|ENSG00000111142|P50579-2|METAP2;;nc|ENSG00000111142|P50579-3|METAP2 3.578088363011678 3.0 True 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6971 38.722 375.0 394470.0 25 0 23473.0 + 32922 SEKLGVMTY 9 151 514.260263033148 1026.505973133096 2 514.2608520388603 MULTI CID FTMS 0 0 0 6962 176025.625 0.414252171510439 -1 0.1038017272949218 9 Unmodified _SEKLGVMTY_ ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1 85.64151623876279 0.0161498729896241 1 [VG]TS{I|L}RMTY 9 6 + 50.378 0.0 0.0 4.9077 4.9077 75.663 0.0 0.0 0.0 7.904849854573683 9.577570906191896 7.904849854573683 1.7958102057136855 0 1.1549471895720984 1.3979400086720375 1.4090970050269638 0.0 [VG]TS{I|L}RMTY;[VG]TTVRMTY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}RMTY;[VG]TS{I|L}[VG]MTY;{[SA]|[TG]}VS{I|L}RMTY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TVRMTY;{[ES]|[DT]|[{I|L}C]}K{I|L}RMTY;[VG]TTV[VG]MTY;{[SA]|[TG]}VTVRMTY;[VG]{I|L}KMTDTY 4.9077;4.7328;4.1376;4.0107;4.0031;3.9627;3.857;3.8357;3.8281;3.7468 -;-;-;-;-;-;-;-;-;- 1711 1 2.17 115331.1 1.0 3501 3468 6962 DOHH2_400M_050219_1,6971 DOHH2_400M_050219_1,6971,SEKLGVMTY True True SEKLGVMTY 38.7218 514.26085203886 4424536.5 6962.0 nc|ENSG00000136758|Q96TA2|YME1L1;;nc|ENSG00000136758|Q96TA2-3|YME1L1;;ENSG00000136758|ENST00000376016|YME1L1 6.190410296122233 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6972 38.736 800.0 256910.0 25 0 19080.0 + 25426 NEDYPVEIHEY 11 135 704.3075378971583 1406.6005228611166 2 704.3066894412041 MULTI CID FTMS 0 0 0 6962 160599.75 0.698265237805866 -1 0.1038017272949218 10 Unmodified _NEDYPVEIHEY_ ENSG00000197223|ENST00000410067|C1D;ENST00000485709.1_1_2:68273401-68290109:-|nuORF 103.41943736471065 0.0040763274989011 1 {[QD]|[EN]|[WG]|[KD]|[RS]}DYPVE{I|L}[MT]N 11 3 66.507 0.0 0.0 4.7282 0.0 0.0 0.0 98.02542291812732 98.02542291812732 24.401359416373666 0.0 0.0 0.0 0 1.325257498915995 0.0 1.7051120522087029 0.3252574989159953 {[QD]|[EN]|[WG]|[KD]|[RS]}DYPVE{I|L}[MT]N 4.7282 - 1825 + 1 2.17 151164.2 0.75 3502 3468 6962 DOHH2_400M_050219_1,6972 DOHH2_400M_050219_1,6972,NEDYPVEIHEY True True NEDYPVEIHEY 38.735632 704.306689441204 1496719.0 6962.0 ENST00000485709.1_1_2:68273401-68290109:-|nuORF;;ENSG00000197223|ENST00000410067|C1D 8.814064661661783 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6973 38.743 405.0 104880.0 25 0 6087.2 + 15795 ISEQTGKELLY 11 83 640.8406369087187 0 640.8411743044853 PEAK CID FTMS 0 0 0 6962 156661.125 0.1515522695765248 2 -0.198760986328125 11 Unmodified _ISEQTGKELLY_ ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY 32.89776655970281 0.1992076078001991 1 {I|L}YTV 4 9 31.529 0.0 0.0 2.4638 0.0 0.0 181.07267899146228 619.3078707330686 800.380549724531 0.0 0.0 0.0 0.0 0 1.25 0.0 0.4247425010840047 0.0 {I|L}YTV 2.4638 - 49 + 1 2.17 40048.3 1.0 3503 3468 6962 DOHH2_400M_050219_1,6973 DOHH2_400M_050219_1,6973,ISEQTGKELLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6974 38.75 405.0 209670.0 25 0 20023.0 -1 0 103 610.6234709222358 1828.848583366908 3 610.6235839724541 MULTI CID FTMS 0 0 0 6962 150962.453125 0.7859929114507316 -1 0.1038017272949218 12 1 {[SA]|[TG]}YQVD 6 -1 34.839 0.0 0.0 1.9049 0.0 0.0 0.0 1162.5383166034885 1162.5383166034885 12.531385742141737 0.0 0.0 0.0 0 0.0 0.958607314841775 0.5866968715561641 0.0 {[SA]|[TG]}YQVD 1.9049 - 655 1 2.17 72121.2 1.0 3504 3468 6962 DOHH2_400M_050219_1,6974 DOHH2_400M_050219_1,6974, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 6975 38.758 467.0 276060.0 25 0 19478.0 + 580 AEIPQQVVGY 10 143 552.2893418956706 1102.5641308581412 2 552.2902709841728 MULTI CID FTMS 0 0 0 6962 152398.453125 0.433127839466102 -2 0.2032852172851562 13 Unmodified _AEIPQQVVGY_ ENSG00000085719|ENST00000517490|CPNE3 27.628801355627647 0.3479284626772844 1 [QP]QVVDV[YR] 9 6 + 34.815 0.0 0.0 3.1576 3.1576 70.417 0.0 0.0 0.0 5.874687072063203 4.727431120499126 4.727431120499126 2.112745100035646 0 0.6237125054200234 0.5686362358410126 0.0 0.6747425010840047 [QP]QVVDV[YR];[QP]QV{[CP]|[EA]}{I|L}[YR];[AG]PQVVDV[YR];[AG]PQV{[CP]|[EA]}{I|L}[YR];[QP][AG]VVDV[YR];[QP]QV{I|L}{[CP]|[EA]}[YR];[QP]Q{I|L}{[CP]|[EA]}V[YR];[QP][AG]V{[CP]|[EA]}{I|L}[YR];[QP]Q{I|L}{[DA]|[EG]}{I|L}[YR];[PG]AQVVDV[YR] 3.1576;2.966;2.5446;2.353;2.3225;2.2107;2.1361;2.1308;2.1249;1.9993 -;-;-;-;-;-;-;-;-;- 2155 1 2.17 100271.7 1.0 3505 3468 6962 DOHH2_400M_050219_1,6975 DOHH2_400M_050219_1,6975,AEIPQQVVGY False True AEIPQQVVGY 38.758425 552.290270984173 7368005.0 6962.0 ENSG00000085719|ENST00000517490|CPNE3 3.7076474825541177 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6976 38.768 447.0 292220.0 25 0 34813.0 + 7492 EGYIKKLL 8 138 482.2975058307363 962.5804587282728 2 482.2974120974541 MULTI CID FTMS 0 0 0 6962 135628.546875 0.7002757142504479 -1 0.1038017272949218 14 Unmodified _EGYIKKLL_ ENSG00000100796|ENST00000554943|PPP4R3A;ENSG00000275052|ENST00000616407|PPP4R3B;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;nc|ENSG00000100796|Q6IN85-5|PPP4R3A;nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B 78.14939416004806 0.0999748067387998 1 EGY{I|L}KK{I|L}{I|L} 8 0 + 68.816 0.0 0.0 7.1492 7.1492 95.355 0.0 0.0 0.0 50.52337168034093 13.399480616943508 13.399480616943508 26.07963467823147 0 1.555462187404089 0.744727494896694 0.0 0.0 + + EGY{I|L}KK{I|L}{I|L};EGY{I|L}{I|L}KK{I|L} 7.1492;4.4398 +;- + 307 + 1 2.17 100950.0 1.0 3506 3468 6962 DOHH2_400M_050219_1,6976 DOHH2_400M_050219_1,6976,EGYIKKLL True True EGYIKKLL 38.767529 482.297412097454 910561.3125 6962.0 nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B;;ENSG00000100796|ENST00000554943|PPP4R3A;;nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;;ENSG00000275052|ENST00000616407|PPP4R3B;;nc|ENSG00000100796|Q6IN85-5|PPP4R3A 4.123542467753093 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6977 38.776 456.0 278760.0 25 0 24316.0 + 7307 EEVLIPDQKY 10 112 617.3223264941822 1232.6301000551643 2 617.3213989138603 MULTI CID FTMS 0 0 0 6962 131418.140625 0.5609474258410899 -1 0.1038017272949218 15 Unmodified _EEVLIPDQKY_ ENSG00000005812|ENST00000355619|FBXL3 93.16586880292088 0.0091067182461363 1 EEV{I|L}{I|L}PDQKY 10 0 + 82.045 0.0 0.0 6.6561 6.6561 88.857 0.0 0.0 0.0 70.04487332185849 9.58607314841774 9.58607314841774 9.164539485499247 0 1.274227503252014 1.6989700043360187 0.6307196863200843 1.0044321917401078 + + EEV{I|L}{I|L}PDQKY;EEV{I|L}{I|L}PD[AG]KY;EEV{I|L}{I|L}P{[NV]|[RG]}{[SA]|[TG]}Y;[DP][KP]DP{I|L}{I|L}V[HC];EEV{I|L}{I|L}P{[NV]|[RG]}{[CA]|SS}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QN]|[E{I|L}]|[KN]}Y{I|L}{I|L}V[HC];[AG]K{[ET]|[MV]}Y{I|L}{I|L}V[HC];{[ET]|[MV]}[KQ]Y{I|L}{I|L}V[HC];EEV{I|L}{I|L}{[ET]|[MV]}[C(Carbamidomethyl (C))K]{I|L};EEV{I|L}{I|L}P[WH][NP] 6.6561;5.9126;5.2276;4.9084;4.886;4.682;4.4435;4.4043;4.2592;4.2024 +;-;-;-;-;-;-;-;-;- + 521 + 1 2.17 99937.4 1.0 3507 3468 6962 DOHH2_400M_050219_1,6977 DOHH2_400M_050219_1,6977,EEVLIPDQKY True True EEVLIPDQKY 38.775638 617.32139891386 997108.5625 6962.0 ENSG00000005812|ENST00000355619|FBXL3 7.764328002929687 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6979 38.78 16.0 3171100.0 25 0 672300.0 + 40562 VKGKSGSG 8 79 360.2065060217567 718.3984591103134 2 360.2065002322197 MULTI CID FTMS 0 0 0 6978 3882741.75 1.0 0 0.0 1 Unmodified _VKGKSGSG_ REV__ENST00000473395.1_1_2:198365100-198366019:+|nuORF 0.0 0.8243325171867699 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.173 45944.7 1.0 3508 3469 6978 DOHH2_400M_050219_1,6979 DOHH2_400M_050219_1,6979,VKGKSGSG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6980 38.783 99.0 359110.0 25 0 45346.0 + + 1457 VVDPDEKSIMTY 12 61 698.8374125483135 1395.660272163427 2 698.8373290896416 MULTI CID FTMS 0 0 0 6978 491660.375 0.2954897519837632 2 -0.239166259765625 2 Unmodified _ALEYDEETLKW_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 5.296884461304476 0.8501568894076437 1 VVDPD[KA]SDKE 11 -1 54.741 0.0 0.0 3.9223 0.0 0.0 0.0 209.0576876276 209.0576876276 36.78266993123256 0.0 0.0 0.0 0 0.805462187404089 2.0 0.4247425010840047 0.0 VVDPD[KA]SDKE 3.9223 - 283 + 1 2.173 32274.4 1.0 3509 3469 6978 DOHH2_400M_050219_1,6980 DOHH2_400M_050219_1,6980,ALEYDEETLKW False False VVDPDEKSIMTY 38.782579 698.837329089642 21479896.0 6978.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 7.417112986246745 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 6981 38.784 43.0 1006600.0 25 0 224360.0 27359 PHVLVPHA 8 65 435.2515280440389 868.4885031548779 2 435.2511779665947 MULTI CID FTMS 0 0 0 6978 1424241.0 1.0 0 0.0 3 Unmodified _PHVLVPHA_ ENSG00000109794|ENST00000706927|FAM149A;ENST00000514829.5_1_4:187065816-187079198:+|nuORF;ENST00000515078.5_1_4:187070333-187088439:+|nuORF;nc|ENSG00000109794|A5PLN7-2|FAM149A;nc|ENSG00000109794|A5PLN7-4|FAM149A;nc|ENSG00000109794|A5PLN7|FAM149A 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.173 42988.7 1.0 3510 3469 6978 DOHH2_400M_050219_1,6981 DOHH2_400M_050219_1,6981,PHVLVPHA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6982 38.786 115.0 466470.0 25 0 45371.0 + 22929 LSEINKPNFY 10 74 612.8165956392543 0 612.8167602419853 PEAK CID FTMS 0 0 0 6978 439601.0 1.0 0 0.0 4 Unmodified _LSEINKPNFY_ ENSG00000067334|ENST00000436063|DNTTIP2 78.7280429016045 0.0003445345937127 1 SE{I|L}NK[NP]{M(Oxidation (M))|F} 8 2 48.053 0.0 0.0 3.9271 0.0 0.0 113.09006238280432 178.05133997135002 291.1414023541544 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.0 1.2302046884880935 + SE{I|L}NK[NP]{M(Oxidation (M))|F} 3.9271 + + 153 + 1 2.173 44661.8 1.0 3511 3469 6978 DOHH2_400M_050219_1,6982 DOHH2_400M_050219_1,6982,LSEINKPNFY True True LSEINKPNFY 38.786191 612.816760241985 2732683.5 6978.0 ENSG00000067334|ENST00000436063|DNTTIP2 8.281506379445394 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6983 38.789 126.0 507840.0 25 0 49206.0 + 32886 SEIGKAVGF 9 100 454.2474826440949 906.48041235499 2 454.2476074099541 MULTI CID FTMS 0 0 0 6978 293327.03125 0.2049964637350261 -1 0.09027099609375 5 Unmodified _SEIGKAVGF_ ENSG00000092853|ENST00000318121|CLSPN;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN 25.399314129420983 0.2080152500878129 1 {[ES]|[DT]|[{I|L}C]}{I|L}G 4 5 20.445 0.0 0.0 2.2555 0.0 0.0 0.0 517.2796460823452 517.2796460823452 1.0161893305714216 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}{I|L}G 2.2555 + + 239 + 1 2.173 56117.9 1.0 3512 3469 6978 DOHH2_400M_050219_1,6983 DOHH2_400M_050219_1,6983,SEIGKAVGF False True SEIGKAVGF 38.788771 454.247607409954 14763041.0 6978.0 ENSG00000092853|ENST00000318121|CLSPN;;nc|ENSG00000092853|Q9HAW4-2|CLSPN;;nc|ENSG00000092853|Q9HAW4-3|CLSPN 2.669825474421183 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6984 38.795 336.0 500070.0 25 0 24125.0 + 7617 EIRLKIVGT 9 162 514.8267637013668 1027.6389744695334 2 514.8268920779228 MULTI CID FTMS 0 0 0 6978 290798.15625 1.0 0 0.0 6 Unmodified _EIRLKIVGT_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000525455.5_1_11:62530233-62533976:+|nuORF;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 76.82478488871298 0.0184607444814265 1 {[QN]|[E{I|L}]|[KN]}R{I|L}K{I|L}KE 8 3 + 35.354 0.0 0.0 3.4404 3.4404 70.236 0.0 0.0 0.0 1.4440327074087025 1.5215305788490738 1.4440327074087025 1.4440327074087025 0 0.3054621874040891 0.958607314841775 1.055462187404089 0.0 {[QN]|[E{I|L}]|[KN]}R{I|L}K{I|L}KE;[VG]{I|L}KNK{I|L}KE;[VG]{I|L}KGGK{I|L}KE;[{I|L}V]GKNK{I|L}KE;[{I|L}V]GKGGK{I|L}KE;[{I|L}V]W{I|L}K{I|L}KE;{[QN]|[E{I|L}]|[KN]}[{I|L}V]GK{I|L}KE;{[QN]|[E{I|L}]|[KN]}[VG]{I|L}K{I|L}KE;{M(Oxidation (M))|F}K{I|L}K{I|L}[PS][VP];[KG]{I|L}VNK{I|L}KE 3.4404;3.2998;3.2553;3.0342;2.9897;2.7465;2.7377;2.5391;1.8144;1.5077 -;-;-;-;-;-;-;-;-;- 2964 1 2.173 129822.1 1.0 3513 3469 6978 DOHH2_400M_050219_1,6984 DOHH2_400M_050219_1,6984,EIRLKIVGT True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6985 38.798 139.0 301580.0 25 0 22724.0 + 1070 AGHPHIITL 9 83 479.7783305051056 957.5421080770112 2 479.7777282595634 MULTI CID FTMS 0 0 0 6978 245730.25 0.2880544926851576 2 -0.239166259765625 7 Unmodified _AGHPHIITL_ ENSG00000156873|ENST00000563588|PHKG2;nc|ENSG00000156873|P15735-2|PHKG2 26.34127834903884 0.1960301806784604 1 {NN|[MP]|[D{I|L}]|[EV]}[RD]{I|L}{I|L}T{I|L} 8 5 + 34.302 0.0 0.0 3.5823 3.5823 82.334 0.0 0.0 0.0 11.42667503568731 21.827665712010216 11.42667503568731 14.948500216800934 0 0.6677353201839438 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[RD]{I|L}{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]{I|L}{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}G[HA]{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[HQ]{I|L}T{I|L};[{I|L}T][HK][{M(Oxidation (M))|F}V]T{I|L} 3.5823;2.0212;1.6534;1.2912;1.2563 -;-;-;-;- 75 1 2.173 34363.0 1.0 3514 3469 6978 DOHH2_400M_050219_1,6985 DOHH2_400M_050219_1,6985,AGHPHIITL False True AGHPHIITL 38.797691 479.777728259563 9788218.0 6978.0 ENSG00000156873|ENST00000563588|PHKG2;;nc|ENSG00000156873|P15735-2|PHKG2 3.331595023473104 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6986 38.802 202.0 352600.0 25 0 20339.0 + 30549 RENDIKSYF 9 94 586.2912261774312 1170.5678994216623 2 586.2911865115166 MULTI CID FTMS 0 0 0 6978 237661.828125 0.2385283269968774 2 -0.239166259765625 8 Unmodified _RENDIKSYF_ ENSG00000168496|ENST00000305885|FEN1;ENST00000401028.2_1_1:91793937-91794252:+|nuORF 29.84058131909904 0.1515068451768857 1 SK{I|L}WY{M(Oxidation (M))|F} 6 6 50.68 0.0 0.0 4.3296 0.0 0.0 328.1420233461466 0.0 328.1420233461466 0.0 37.185559738766045 0.0 0.0 0 0.7059771852360797 0.0 0.4247425010840047 0.4247425010840047 SK{I|L}WY{M(Oxidation (M))|F} 4.3296 - 179 + 1 2.173 57696.9 1.0 3515 3469 6978 DOHH2_400M_050219_1,6986 DOHH2_400M_050219_1,6986,RENDIKSYF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6987 38.812 600.0 194680.0 25 0 36707.0 9711 FLVAGKAL 8 151 409.7595457602949 817.5045385873899 2 409.7589294314384 MULTI CID FTMS 0 0 0 6978 176540.515625 1.0 0 0.0 9 Unmodified _FLVAGKAL_ ENST00000416928.6_1_2:177040485-177040746:-|nuORF 2.889219685676258 0.8067950007271085 1 Y 1 8 11.783 0.0 0.0 1.4413 0.0 0.0 636.4303788967634 0.0 636.4303788967634 0.0 0.6734928694872799 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4413 - 29 + 1 2.173 93060.4 1.0 3516 3469 6978 DOHH2_400M_050219_1,6987 DOHH2_400M_050219_1,6987,FLVAGKAL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 6988 38.817 299.0 187960.0 25 0 27263.0 33471 SIGLTQRR 8 92 465.7777938128479 0 465.7779724001884 PEAK CID FTMS 0 0 0 6978 174438.203125 0.8339479229857725 2 -0.239166259765625 10 Unmodified _SIGLTQRR_ ENSG00000283787|ENST00000640310|PRR33 4.75600775471527 0.5825752635465162 1 {M(Oxidation (M))|F} 1 8 0.088644 0.0 0.0 0.0095363 0.0 0.0 500.3136615008926 279.1449068658813 779.4585683667739 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.0095363 - 1 + 1 2.173 49983.4 1.0 3517 3469 6978 DOHH2_400M_050219_1,6988 DOHH2_400M_050219_1,6988,SIGLTQRR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6989 38.831 800.0 181830.0 25 0 15874.0 + 7205 EEQPKNYQVW 10 156 660.8146033921018 1319.6146538510036 2 660.8146850466728 MULTI CID FTMS 0 0 0 6978 162752.34375 1.0 0 0.0 11 Unmodified _EEQPKNYQVW_ ENSG00000168522|ENST00000302279|FNTA;ENST00000526755.5_1_8:42911676-42932640:+|nuORF;nc|ENSG00000168522|P49354-2|FNTA 72.96794272382148 0.0188410189619069 1 EEQ{[QV]|[N{I|L}]|[RA]|[KV]}Q{M(Oxidation (M))|F}QVW 10 3 + 65.321 0.0 0.0 4.95 4.95 73.744 0.0 0.0 0.0 0.3980561400136508 4.680214713696863 0.3980561400136508 0.3980561400136508 0 1.424742501084005 1.0 1.774227503252014 0.2396518287104437 EEQ{[QV]|[N{I|L}]|[RA]|[KV]}Q{M(Oxidation (M))|F}QVW;[AG]EE{[QV]|[N{I|L}]|[RA]|[KV]}Q{M(Oxidation (M))|F}QVW;[DV][{M(Oxidation (M))|F}T]QVQAQVW;[YK]NPQQEEVW;[KP]NYQQEEVW;[DV]N{[{M(Oxidation (M))|F}D]|MM}VQAQVW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{[QV]|[N{I|L}]|[RA]|[KV]}Q{M(Oxidation (M))|F}QVW;EEQ{[QV]|[N{I|L}]|[RA]|[KV]}Q{M(Oxidation (M))|F}[AG]VW;EEQ{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{M(Oxidation (M))|F}QVW;EE[AG]{[QV]|[N{I|L}]|[RA]|[KV]}Q{M(Oxidation (M))|F}QVW 4.95;4.9198;4.5953;4.5;4.4173;4.3488;4.3;4.2555;4.2555;4.2555 -;-;-;-;-;-;-;-;-;- 7325 1 2.173 110643.7 0.7400000095367432 3518 3469 6978 DOHH2_400M_050219_1,6989 DOHH2_400M_050219_1,6989,EEQPKNYQVW True True EEQPKNYQVW 38.831335 660.814685046673 1224919.125 6978.0 ENST00000526755.5_1_8:42911676-42932640:+|nuORF;;ENSG00000168522|ENST00000302279|FNTA;;nc|ENSG00000168522|P49354-2|FNTA 6.645012537638347 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6990 38.839 402.0 408590.0 25 0 67197.0 + 32839 SEGQEPALRSW 11 133 630.304558822642 1258.594564712084 2 630.3053466677666 MULTI CID FTMS 0 0 0 6978 161683.296875 0.3970548340533944 -1 0.09027099609375 12 Unmodified _SEGQEPALRSW_ ENSG00000075702|ENST00000401500|WDR62;nc|ENSG00000075702|O43379|WDR62 125.18120922955336 0.0506983849239639 1 [AG]YR{I|L}APEQG 10 9 65.505 0.0 0.0 5.2046 0.0 0.0 0.0 213.0511850621048 213.0511850621048 41.00599598504188 0.0 0.0 0.0 0 2.031718309096375 1.0969100130080565 0.9247425010840048 1.0356668758921828 [AG]YR{I|L}APEQG 5.2046 - 524 1 2.173 123729.2 1.0 3519 3469 6978 DOHH2_400M_050219_1,6990 DOHH2_400M_050219_1,6990,SEGQEPALRSW True True SEGQEPALRSW 38.838537 630.305346667767 2270073.75 6978.0 nc|ENSG00000075702|O43379|WDR62;;ENSG00000075702|ENST00000401500|WDR62 7.55330244700114 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6991 38.841 129.0 898470.0 25 0 104240.0 + 17064 KLDDLHTLY 9 93 373.2005423823838 1116.5797977473514 3 373.2008849978447 MULTI CID FTMS 0 0 0 6978 142938.0 1.0 0 0.0 13 Unmodified _KLDDLHTLY_ ENSG00000047932|ENST00000368498|GOPC;nc|ENSG00000047932|Q9HD26-2|GOPC 6.1918466704503565 0.6985299363762377 1 HT{I|L}Y 4 5 20.93 0.0 0.0 1.8745 0.0 0.0 584.318651267775 0.0 584.318651267775 0.0 6.32576888900239 0.0 0.0 0 0.2742275032520141 0.0 0.5 0.0 + HT{I|L}Y 1.8745 + + 12 1 2.173 101188.6 1.0 3520 3469 6978 DOHH2_400M_050219_1,6991 DOHH2_400M_050219_1,6991,KLDDLHTLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6992 38.847 231.0 398740.0 25 0 39626.0 + 6417 EAAIRSVEL 9 124 494.2764143154317 986.5382756976636 2 494.2770873904228 MULTI CID FTMS 0 0 0 6978 136004.84375 0.3415073780857373 -1 0.09027099609375 14 Unmodified _EAAIRSVEL_ ENSG00000157538|ENST00000309117|VPS26C;ENST00000399000.7_1_21:38597847-38603826:-|nuORF;ENST00000497493.1_1_21:38599661-38600668:-|nuORF;nc|ENSG00000157538|O14972-2|VPS26C 93.16586880292088 0.0136995152735431 1 {[CP]|[EA]}A{I|L}SRVE{I|L} 9 2 + 42.728 0.0 0.0 4.3311 4.3311 71.224 0.0 0.0 0.0 3.3028126688223907 18.41359541361508 3.3028126688223907 0.2287874528033739 0 1.863364334130467 0.0 2.0994850021680094 0.0 {[CP]|[EA]}A{I|L}SRVE{I|L};{[CP]|[EA]}A{I|L}S{I|L}AAE{I|L};{[CP]|[EA]}A{I|L}RSVE{I|L};{[QN]|[E{I|L}]|[KN]}[QT]RVE{I|L};{[QN]|[E{I|L}]|[KN]}[QT]{I|L}AAE{I|L};[TA][W{I|L}]RVE{I|L};[TA][W{I|L}]{I|L}AAE{I|L};[PG]A{I|L}[PS]SV{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VERVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VE{I|L}AAE{I|L} 4.3311;4.3079;4.0111;3.7618;3.7331;3.5776;3.5489;3.5279;3.5148;3.4861 -;-;+;-;-;-;-;-;-;- + 711 1 2.173 72937.5 1.0 3521 3469 6978 DOHH2_400M_050219_1,6992 DOHH2_400M_050219_1,6992,EAAIRSVEL True True EAAIRSVEL 38.846666 494.277087390423 1943024.75 6978.0 ENST00000497493.1_1_21:38599661-38600668:-|nuORF;;ENSG00000157538|ENST00000309117|VPS26C;;nc|ENSG00000157538|O14972-2|VPS26C;;ENST00000399000.7_1_21:38597847-38603826:-|nuORF 4.398040294647217 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6993 38.855 499.0 130070.0 25 0 4486.2 8383 ESEDGEREHEE 11 103 673.2624231524226 1344.510293371645 2 673.7648193240166 MULTI CID FTMS 0 0 0 6978 120044.6953125 1.0 0 0.0 15 Unmodified _ESEDGEREHEE_ ENSG00000144724|ENST00000474889|PTPRG;nc|ENSG00000144724|P23470-2|PTPRG 10.799506525563784 0.8105043987015127 1 NVDMVNE 7 9 26.934 0.0 0.0 2.0033 0.0 0.0 345.11762873813035 195.041314946936 540.1589436850663 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.6307196863200843 0.0 NVDMVNE 2.0033 - 264 + 1 2.173 53291.7 1.0 3522 3469 6978 DOHH2_400M_050219_1,6993 DOHH2_400M_050219_1,6993,ESEDGEREHEE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6994 38.861 290.0 273750.0 25 0 27756.0 + 20450 LLKEHYVDL 9 115 565.3157697985291 0 565.3158447146416 PEAK CID FTMS 0 0 0 6978 117057.5078125 0.6027922492351325 -1 0.09027099609375 16 Unmodified _LLKEHYVDL_ ENSG00000239672|ENST00000393196|NME1;ENST00000512768.1_1_17:49231734-49237541:+|nuORF;nc|ENSG00000239672|P15531-2|NME1;nc|ENSG00000243678|P22392-2|NME2 40.23920728925047 0.0605413866147893 1 {I|L}CP{I|L}A 5 8 21.3 0.0 0.0 1.8873 0.0 0.0 113.0805009234269 515.2382296197874 628.3187305432143 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {I|L}CP{I|L}A 1.8873 - 286 + 1 2.173 64434.3 1.0 3523 3469 6978 DOHH2_400M_050219_1,6994 DOHH2_400M_050219_1,6994,LLKEHYVDL True True LLKEHYVDL 38.860823 565.315844714642 1242559.5 6978.0 nc|ENSG00000239672|P15531-2|NME1;;ENSG00000239672|ENST00000393196|NME1;;nc|ENSG00000243678|P22392-2|NME2;;ENST00000512768.1_1_17:49231734-49237541:+|nuORF 4.014144500096639 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6995 38.866 274.0 254020.0 25 0 43296.0 + 32678 SDINVRSW 8 102 488.7464119549351 975.4782709766702 2 488.7465698122978 MULTI CID FTMS 0 0 0 6978 111461.140625 0.6986119843540972 -1 0.09027099609375 17 Unmodified _SDINVRSW_ ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L 34.40172386719151 0.3279500639400574 1 {[DS]|[MA]|[CV]|TT}{I|L}NVRSW 8 0 + 46.636 0.0 0.0 4.7808 4.7808 79.896 0.0 0.0 0.0 6.989700043360188 6.154239528859442 6.154239528859442 6.154239528859442 0 0.8494850021680094 0.0 0.0 0.3807196863200844 + + {[DS]|[MA]|[CV]|TT}{I|L}NVRSW;{[DS]|[MA]|[CV]|TT}{I|L}NVRC(Carbamidomethyl (C)){I|L};{[DS]|[MA]|[CV]|TT}{I|L}NVRWS;{[DS]|[MA]|[CV]|TT}{I|L}GGVRSW;{[DS]|[MA]|[CV]|TT}{I|L}NVR[CG]{I|L};{[DS]|[MA]|[CV]|TT}{I|L}GGVRC(Carbamidomethyl (C)){I|L};{[DS]|[MA]|[CV]|TT}{I|L}GGVRWS;{[DS]|[MA]|[CV]|TT}{I|L}NV[QT]S{I|L};{[DS]|[MA]|[CV]|TT}{I|L}NV[QT]{I|L}S;{[DS]|[MA]|[CV]|TT}{I|L}GGVR[CG]{I|L} 4.7808;4.1499;4.0119;3.8313;3.2004;3.2004;3.0624;2.9167;2.7786;2.2565 +;-;-;-;-;-;-;-;-;- + 216 + 1 2.173 59731.9 1.0 3524 3469 6978 DOHH2_400M_050219_1,6995 DOHH2_400M_050219_1,6995,SDINVRSW False True SDINVRSW 38.865864 488.746569812298 860654.75 6978.0 nc|ENSG00000121210|A2VDJ0|TMEM131L;;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;;ENSG00000121210|ENST00000409959|TMEM131L;;nc|ENSG00000121210|A2VDJ0-6|TMEM131L 4.294035037358602 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6996 38.873 400.0 186220.0 25 0 12558.0 + 36760 TEAYIAQRF 9 117 549.7827489793796 1097.550945025559 2 549.7828857302666 MULTI CID FTMS 0 0 0 6978 100562.75 1.0 0 0.0 18 Unmodified _TEAYIAQRF_ ENSG00000101974|ENST00000682941|ATP11C;nc|ENSG00000101974|Q8NB49-2|ATP11C;nc|ENSG00000101974|Q8NB49-3|ATP11C;nc|ENSG00000101974|Q8NB49-4|ATP11C;nc|ENSG00000101974|Q8NB49|ATP11C 49.93300154707207 0.0405168250806675 1 {[ET]|[MV]}AY{I|L}AQR{M(Oxidation (M))|F} 9 0 + 55.794 0.0 0.0 5.0835 5.0835 82.532 0.0 0.0 0.0 35.34881702974726 11.765775469128563 11.765775469128563 8.010299956639813 0 1.3807196863200843 0.0 0.0 0.3807196863200844 + + {[ET]|[MV]}AY{I|L}AQR{M(Oxidation (M))|F};{[ET]|[MV]}{M(Oxidation (M))|F}S{I|L}AQR{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KS]A{I|L}YA[DP];{[ET]|[MV]}AY{I|L}A[AG]R{M(Oxidation (M))|F};{[ET]|[MV]}AY{I|L}A[KS]C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KS]A{I|L}S{M(Oxidation (M))|F}[DP];{[ET]|[MV]}{M(Oxidation (M))|F}S{I|L}A[AG]R{M(Oxidation (M))|F};[PS][HK]A{I|L}YA[DP];[KG][YT]A{I|L}YA[DP];{[ET]|[MV]}{M(Oxidation (M))|F}S{I|L}A[KS]C{I|L} 5.0835;4.3537;4.3042;4.2445;3.6711;3.5743;3.5147;3.2948;3.0121;2.9413 +;-;-;-;-;-;-;-;-;- + 236 + 1 2.173 61583.9 1.0 3525 3469 6978 DOHH2_400M_050219_1,6996 DOHH2_400M_050219_1,6996,TEAYIAQRF True True TEAYIAQRF 38.873033 549.782885730267 621332.1875 6978.0 ENSG00000101974|ENST00000682941|ATP11C;;nc|ENSG00000101974|Q8NB49|ATP11C;;nc|ENSG00000101974|Q8NB49-4|ATP11C;;nc|ENSG00000101974|Q8NB49-3|ATP11C;;nc|ENSG00000101974|Q8NB49-2|ATP11C 8.598772684733072 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 6997 38.88 399.0 195880.0 25 0 11067.0 + -1 SWFPSRCSL 9 140 380.5140200167682 1138.5202306505046 3 380.5134460330009 MULTI CID FTMS 0 0 0 6978 97632.21875 0.2682916461498272 2 -0.239166259765625 19 Carbamidomethyl (C) _SWFPSRC(Carbamidomethyl (C))SL_ REV__ENST00000506352.5_2_4:41216520-41216565:-|nuORF 4.189502756095605 0.7684307469601125 1 {[WS]|[C(Carbamidomethyl (C)){I|L}]}P{M(Oxidation (M))|F} 4 -1 16.198 0.0 0.0 1.4227 0.0 0.0 0.0 618.2792452447874 618.2792452447874 3.098943791441968 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}P{M(Oxidation (M))|F} 1.4227 - 67 + 1 2.173 65990.0 1.0 3526 3469 6978 DOHH2_400M_050219_1,6997 DOHH2_400M_050219_1,6997,SWFPSRCSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 6998 38.884 138.0 545650.0 25 0 54149.0 -1 0 104 363.1993399884657 362.1920635218657 1 363.2014343142509 MULTI CID FTMS 0 0 0 6978 272999.34375 0.2698657136825396 -19 1.9634475708007808 20 1 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 4.0321 0.0 0.0 197.11271584295787 0.0 197.11271584295787 0.0 5.781736004299617 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 4.0321 - 9 + 1 2.173 65328.1 1.0 3527 3469 6978 DOHH2_400M_050219_1,6998 DOHH2_400M_050219_1,6998, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7000 38.889 56.0 1071000.0 25 0 154490.0 + 9745 FMKPGKVVL 9 75 509.8097247099855 1017.6048964867708 2 509.8098022341728 MULTI CID FTMS 0 0 0 6999 879868.625 0.4694558374511891 1 -0.13067626953125 1 Unmodified _FMKPGKVVL_ ENSG00000131469|ENST00000253788|RPL27;ENST00000587478.1_1_17:41150475-41150953:+|nuORF;ENST00000593262.1_1_17:41150683-41150953:+|nuORF 23.1484247019978 0.2366544122328345 1 GGPVVK{I|L}{[YD]|[{M(Oxidation (M))|F}M]} 9 8 27.089 0.0 0.0 2.662 0.0 0.0 71.07423598457187 0.0 71.07423598457187 0.0 12.823741001524311 0.0 0.0 0 0.0 0.0 0.0 0.0 GGPVVK{I|L}{[YD]|[{M(Oxidation (M))|F}M]} 2.662 - 209 1 2.173 50458.2 1.0 3528 3470 6999 DOHH2_400M_050219_1,7000 DOHH2_400M_050219_1,7000,FMKPGKVVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7001 38.891 84.0 552940.0 25 0 87851.0 + 37069 TGIARVPL 8 74 413.7611497656292 825.5077465980584 2 413.7608825564384 MULTI CID FTMS 0 0 0 6999 465161.28125 0.5108563610315501 1 -0.13067626953125 2 Unmodified _TGIARVPL_ ENSG00000125835|ENST00000381342|SNRPB;ENSG00000128739|ENST00000390687|SNRPN;nc|ENSG00000125835|P14678-3|SNRPB;nc|ENSG00000125835|P14678|SNRPB;nc|ENSG00000128739|P63162-2|SNRPN 30.63653989081413 0.3996269429323407 1 {[SA]|[TG]}{I|L}ARV[{I|L}P] 8 0 + 45.903 0.0 0.0 5.5606 5.5606 91.361 0.0 0.0 0.0 36.95046257204389 5.440680443502757 5.440680443502757 44.19084078155621 0 1.6237125054200234 1.3010299956639813 0.0 0.0 + + {[SA]|[TG]}{I|L}ARV[{I|L}P];[KQ][VG][KG][{I|L}P] 5.5606;0.20739 +;- + 66 + 1 2.173 41392.0 1.0 3529 3470 6999 DOHH2_400M_050219_1,7001 DOHH2_400M_050219_1,7001,TGIARVPL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7002 38.893 75.0 847750.0 25 0 181540.0 11755 GLISRQGR 8 83 443.7646912314235 885.514829529647 2 443.7642394900322 MULTI CID FTMS 0 0 0 6999 604908.0 1.0 0 0.0 3 Unmodified _GLISRQGR_ ENST00000566170.1_1_6:13615096-13615348:-|nuORF 2.302733041254933 0.8103549651115762 1 R 1 7 17.408 0.0 0.0 1.9659 0.0 0.0 711.4029806300362 0.0 711.4029806300362 0.0 16.439327631514033 0.0 0.0 0 0.0 0.0 0.0 0.1923877696554315 + R 1.9659 + + 3 + 1 2.173 53745.9 1.0 3530 3470 6999 DOHH2_400M_050219_1,7002 DOHH2_400M_050219_1,7002,GLISRQGR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7003 38.895 101.0 552050.0 25 0 83942.0 18039 KSSSVIHR 8 91 457.2645569022711 912.5145608713422 2 457.2635681033134 MULTI CID FTMS 0 0 0 6999 434704.53125 0.7152749175614965 7 -0.7252540588378906 4 Unmodified _KSSSVIHR_ ENSG00000100731|ENST00000304743|PCNX1;ENST00000554879.5_1_14:71374480-71476401:+|nuORF;nc|ENSG00000100731|Q96RV3-2|PCNX1;nc|ENSG00000100731|Q96RV3-3|PCNX1;nc|ENSG00000100731|Q96RV3-4|PCNX1 4.75600775471527 0.7954636275367004 1 {[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}{I|L}HR 7 5 + 28.302 0.0 0.0 3.1015 3.1015 80.987 0.0 0.0 0.0 16.31238041787949 8.291911569070116 8.291911569070116 14.076998459611936 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}{I|L}HR;{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}[RH]{I|L} 3.1015;1.5589 -;- 37 + 1 2.173 47734.4 1.0 3531 3470 6999 DOHH2_400M_050219_1,7003 DOHH2_400M_050219_1,7003,KSSSVIHR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7004 38.898 152.0 578750.0 25 0 99198.0 + 6470 EAFVRHIL 8 91 492.7847217060316 983.5548904788632 2 492.7845947146416 MULTI CID FTMS 0 0 0 6999 418492.03125 0.2553215889267023 -1 0.108489990234375 5 Unmodified _EAFVRHIL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000412707.1_1_17:69617202-69617574:+|nuORF 96.28474662873226 0.07713372045102 1 EA{M(Oxidation (M))|F}VRH{I|L}{I|L} 8 0 + 84.322 0.0 0.0 8.5732 8.5732 97.257 0.0 0.0 0.0 73.91563799163855 11.40978057358332 11.40978057358332 23.36819398339564 0 2.1237125054200234 2.0 0.0 0.0 + + EA{M(Oxidation (M))|F}VRH{I|L}{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}VRH{I|L}{I|L};EA{M(Oxidation (M))|F}V{I|L}[RH]{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VRH{I|L}{I|L};{[CP]|[EA]}[{I|L}V][TP]E{I|L}{I|L};{I|L}[W{M(Oxidation (M))|F}][VG]H{I|L}{I|L};[H{I|L}][Q{I|L}][{M(Oxidation (M))|F}T]{I|L}{I|L} 8.5732;6.1973;5.9821;4.7142;3.4472;2.5518;1.4845 +;+;-;-;-;-;- + 207 + 1 2.173 71299.8 1.0 3532 3470 6999 DOHH2_400M_050219_1,7004 DOHH2_400M_050219_1,7004,EAFVRHIL True True EAFVRHIL 38.897716 492.784594714642 8524420.0 6999.0 ENSG00000092841|ENST00000550697|MYL6;;ENST00000412707.1_1_17:69617202-69617574:+|nuORF 6.455222606658936 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7005 38.901 147.0 544220.0 25 0 49506.0 + + 6609 GEVPFNHEI 9 121 520.2513798918826 1038.4882068505651 2 521.2536498904228 MULTI CID FTMS 0 0 0 6999 380737.34375 0.8887957963171816 1 -0.13067626953125 6 Unmodified _EAQWGALHQ_ ENSG00000168090|ENST00000303904|COPS6 14.838274106304384 0.4350285940865338 1 {[DA]|[EG]}V[EP]M{I|L}V 8 -1 40.099 0.0 0.0 3.8613 0.0 0.0 0.0 181.0380266779487 181.0380266779487 13.750612633917 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8494850021680094 0.0 {[DA]|[EG]}V[EP]M{I|L}V 3.8613 - 367 1 2.173 67154.4 1.0 3533 3470 6999 DOHH2_400M_050219_1,7005 DOHH2_400M_050219_1,7005,EAQWGALHQ False False GEVPFNHEI 38.900664 521.253649890423 4554426.0 6999.0 ENSG00000168090|ENST00000303904|COPS6 6.455945173899333 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7006 38.903 126.0 483080.0 25 0 33411.0 + 29403 QLDSAVKNLY 10 111 575.8077963064118 0 575.8075439333916 PEAK CID FTMS 0 0 0 6999 328911.65625 1.0 0 0.0 7 Unmodified _QLDSAVKNLY_ ENSG00000149054|ENST00000278319|ZNF215;nc|ENSG00000149054|Q9UL58-2|ZNF215 30.63653989081413 0.2106260509139429 1 {I|L}E 2 9 10.969 0.0 0.0 0.95417 0.0 0.0 131.05289622434844 773.392881984031 904.4457782083794 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E 0.95417 - 143 + 1 2.173 48601.0 1.0 3534 3470 6999 DOHH2_400M_050219_1,7006 DOHH2_400M_050219_1,7006,QLDSAVKNLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7007 38.917 800.0 172820.0 25 0 4028.4 + 8065 QSENPWDNKAVY 12 160 725.8341415875412 1449.6537302418824 2 725.8342773318291 MULTI CID FTMS 0 0 0 6999 213149.34375 1.0 0 0.0 8 Carbamidomethyl (C) _ENTNRLMQVWC(Carbamidomethyl (C))_ ENSG00000162298|ENST00000377190|SYVN1;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1 47.594388314883695 0.1309523012099263 1 {[QS]|[NT]}ENRPVN[MN][YV] 12 8 + 83.479 0.0 0.0 5.7586 5.7586 82.363 0.0 0.0 0.0 10.368635417295453 7.503406882387225 7.503406882387225 4.771212547196626 0 1.305462187404089 1.0969100130080565 2.110924374808178 2.427825934852436 {[QS]|[NT]}ENRPVN[MN][YV];{[QS]|[NT]}ENRPNV[MN][YV];{[QS]|[NT]}EGGRPVN[MN][YV];{[QS]|[NT]}ENRPVGG[MN][YV];[AG]SENRPVN[MN][YV];{[QS]|[NT]}EGGRPNV[MN][YV];{[QS]|[NT]}ENRPGGV[MN][YV];{[QS]|[NT]}ENRVPN[MN][YV];[AG]DTNRPVN[MN][YV];[AG]SENRPNV[MN][YV] 5.7586;5.4294;5.131;5.131;5.0433;4.8018;4.8018;4.7484;4.7169;4.7142 -;-;-;-;-;-;-;-;-;- 13978 1 2.173 102641.9 0.8600000143051147 3535 3470 6999 DOHH2_400M_050219_1,7007 DOHH2_400M_050219_1,7007,ENTNRLMQVWC False False QSENPWDNKAVY 38.917087 725.834277331829 2002226.125 6999.0 ENSG00000162298|ENST00000377190|SYVN1;;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;;nc|ENSG00000162298|Q86TM6-2|SYVN1;;nc|ENSG00000162298|Q86TM6-3|SYVN1 8.483281771341959 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7008 38.92 165.0 305470.0 25 0 45582.0 + 20561 LLNCKPTDII 10 87 377.2132108722997 1128.6178032170992 3 377.2129394412041 MULTI CID FTMS 0 0 0 6999 187494.203125 1.0 0 0.0 9 Unmodified _LLNCKPTDII_ REV__ENSG00000172382|ENST00000302641|PRSS27 10.073929032068715 0.6785112666868882 1 {[YC]|[HE]}[YK][DV]{I|L}{I|L}{I|L} 9 -1 {[YC]|[HE]}[YK][DV]{I|L}{I|L} + + 13.099 -1.7955 -0.18 1.1606 1.1606 48.39 0.0 0.0 0.0 0.0 -11.593793813122062 -11.593793813122062 0.0 0 0.0 0.0 0.0 0.0 {[YC]|[HE]}[YK][DV]{I|L}{I|L}{I|L} 1.1606 - 29 + 1 2.173 45013.0 1.0 3536 3470 6999 DOHH2_400M_050219_1,7008 DOHH2_400M_050219_1,7008,LLNCKPTDII False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7009 38.934 800.0 137330.0 25 0 10570.0 + 6845 EEDQRTYVF 9 155 593.7722255486871 1185.529898164174 2 593.7718383669853 MULTI CID FTMS 0 0 0 6999 167422.109375 0.3044407140683178 1 -0.13067626953125 10 Unmodified _EEDQRTYVF_ ENSG00000105771|ENST00000270066|SMG9;ENST00000595700.5_1_19:44242246-44254893:-|nuORF;nc|ENSG00000105771|Q9H0W8-2|SMG9 25.399314129420983 0.2080152500878129 1 V{M(Oxidation (M))|F} 2 7 18.94 0.0 0.0 1.5976 0.0 0.0 921.3828167206178 0.0 921.3828167206178 0.0 1.8153152052874293 0.0 0.0 0 0.6237125054200234 0.0 0.0 0.0 + V{M(Oxidation (M))|F} 1.5976 + + 215 + 1 2.173 80363.5 0.75 3537 3470 6999 DOHH2_400M_050219_1,7009 DOHH2_400M_050219_1,7009,EEDQRTYVF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7010 38.948 800.0 256990.0 25 0 14803.0 + 33371 SGKLKLSL 8 212 423.2754357939151 844.5363186546302 2 423.2748901247978 MULTI CID FTMS 0 0 0 6999 155496.078125 1.0 0 0.0 11 Unmodified _SGKLKLSL_ ENSG00000171566|ENST00000499023|PLRG1;nc|ENSG00000171566|O43660-2|PLRG1 74.19965305603844 0.1059897396705814 1 SGK{I|L}K{I|L}S{I|L} 8 0 + 79.239 0.0 0.0 9.3825 9.3825 96.294 0.0 0.0 0.0 23.76519707219504 13.357921019231924 13.357921019231924 13.357921019231924 0 2.048455006504028 0.8860566476931632 0.5866968715561641 0.3494850021680094 + + SGK{I|L}K{I|L}S{I|L};SGK{I|L}K{I|L}{I|L}S 9.3825;7.8008 +;- + 307 + 1 2.173 158519.1 0.5699999928474426 3538 3470 6999 DOHH2_400M_050219_1,7010 DOHH2_400M_050219_1,7010,SGKLKLSL True True SGKLKLSL 38.947968 423.274890124798 904106.0625 6999.0 ENSG00000171566|ENST00000499023|PLRG1;;nc|ENSG00000171566|O43660-2|PLRG1 2.986917932828268 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7011 38.952 230.0 312070.0 25 0 17859.0 -1 ETLCIVWF 8 112 534.2663908134745 1066.5182286937488 2 534.2667724490166 MULTI CID FTMS 0 0 0 6999 159059.1875 0.0944521055130299 2 -0.2399940490722656 12 Carbamidomethyl (C) _ETLC(Carbamidomethyl (C))IVWF_ nc|ENSG00000151079|P17658|KCNA6 15.768221252438446 0.6779680726941459 1 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}[YK]{I|L}[DP] 9 -1 + 36.373 0.0 0.0 3.4104 3.4104 83.536 0.0 0.0 0.0 20.642492736872605 21.262101973829324 20.642492736872605 28.296383605240912 0 0.5 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}[YK]{I|L}[DP];{[ET]|[MV]}{I|L}[YK]{[ET]|[MV]}[PS];{[ET]|[MV]}{I|L}[YK]{NN|[MP]|[D{I|L}]|[EV]}W;[NP][PS]V[WR][DP];[KP]N{[HG]|PP}[R{M(Oxidation (M))|F}][DP] 3.4104;0.75726;0.64549;0.55417;0.15016 -;-;-;-;- 447 1 2.173 61806.8 1.0 3539 3470 6999 DOHH2_400M_050219_1,7011 DOHH2_400M_050219_1,7011,ETLCIVWF False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7012 38.966 800.0 177870.0 25 0 9134.8 + 33013 SENPWDNKAVY 11 172 661.802864550186 0 661.8027831912041 PEAK CID FTMS 0 0 0 6999 153174.53125 0.917536406460737 -1 0.108489990234375 13 Unmodified _SENPWDNKAVY_ ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1 112.04118876639724 1.7889114703226854e-15 1 VAC(Carbamidomethyl (C))VA{[NV]|[RG]}PND 10 10 75.897 0.0 0.0 5.7428 0.0 0.0 181.0731538404537 98.0252932184203 279.098447058874 0.0 0.0 0.0 0.0 0 2.274227503252014 0.0 1.2346368802282015 2.396591250700361 VAC(Carbamidomethyl (C))VA{[NV]|[RG]}PND 5.7428 - 3470 + 1 2.173 105747.9 0.7300000190734863 3540 3470 6999 DOHH2_400M_050219_1,7012 DOHH2_400M_050219_1,7012,SENPWDNKAVY True True SENPWDNKAVY 38.966136 661.802783191204 1427575.625 6999.0 ENSG00000162298|ENST00000377190|SYVN1;;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;;nc|ENSG00000162298|Q86TM6-2|SYVN1;;nc|ENSG00000162298|Q86TM6-3|SYVN1 8.415258725484213 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7013 38.976 451.0 207800.0 25 0 25666.0 + 35383 STEQFQEYY 9 141 597.7531465892025 1193.491740245205 2 597.7520629763603 MULTI CID FTMS 0 0 0 6999 134341.4375 1.0 0 0.0 14 Unmodified _STEQFQEYY_ ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-2|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47 13.90604991867851 0.4602628045680013 1 RG{M(Oxidation (M))|F}GGGS 7 8 22.131 0.0 0.0 1.8543 0.0 0.0 440.1563043094612 132.04566370181877 572.20196801128 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7708865128625186 0.0 RG{M(Oxidation (M))|F}GGGS 1.8543 - 1532 + 1 2.173 72925.8 1.0 3541 3470 6999 DOHH2_400M_050219_1,7013 DOHH2_400M_050219_1,7013,STEQFQEYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7014 38.989 800.0 125120.0 25 0 7607.8 + -1 ENLSCHEACG 10 144 588.7233254127618 1175.4320978923236 2 588.7228881716728 MULTI CID FTMS 0 0 0 6999 102907.1875 1.0 0 0.0 15 2 Carbamidomethyl (C) _ENLSC(Carbamidomethyl (C))HEAC(Carbamidomethyl (C))G_ REV__ENSG00000130427|ENST00000252723|EPO 13.90604991867851 0.6142120002215601 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DMEE{M(Oxidation (M))|F}VY 9 -1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DMEE{M(Oxidation (M))|F} + + 21.744 -5.4498 -0.60871 1.8498 1.8498 48.769 0.0 0.0 0.0 0.0 5.5177117722934526 0.0 0.0 0 0.5 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DMEE{M(Oxidation (M))|F}VY 1.8498 - 292 + 1 2.173 77250.9 0.550000011920929 3542 3470 6999 DOHH2_400M_050219_1,7014 DOHH2_400M_050219_1,7014,ENLSCHEACG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7015 38.995 290.0 165240.0 25 0 17141.0 -1 QSEIASMLY 9 91 529.2459432545143 1056.4773335758284 2 529.2464477419853 MULTI CID FTMS 0 0 0 6999 88253.7265625 0.6324047035576973 -3 0.3025627136230469 16 Oxidation (M) _QSEIASM(Oxidation (M))LY_ ENSG00000197256|ENST00000586659|KANK2;ENST00000587317.1_1_19:11277236-11281082:-|nuORF;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2 29.081581746732265 0.1611639662936252 1 AY{I|L}Y 4 -1 29.553 0.0 0.0 2.7973 0.0 0.0 528.222769222116 0.0 528.222769222116 0.0 17.76985736899375 0.0 0.0 0 0.0 0.0 0.0 0.0 AY{I|L}Y 2.7973 - 186 + 1 2.173 42490.5 1.0 3543 3470 6999 DOHH2_400M_050219_1,7015 DOHH2_400M_050219_1,7015,QSEIASMLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7016 38.996 66.0 676840.0 25 0 66020.0 -1 0 60 603.967411717614 1808.880405753042 3 603.9728271365166 MULTI CID FTMS 0 0 0 6999 264973.59375 0.1306612791460705 -5 0.4210700988769531 17 1 {I|L}Q 2 -1 22.831 0.0 0.0 1.2622 0.0 0.0 1549.7271292411262 0.0 1549.7271292411262 0.0 0.868193983395642 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}Q 1.2622 - 96 + 1 2.173 42360.0 1.0 3544 3470 6999 DOHH2_400M_050219_1,7016 DOHH2_400M_050219_1,7016, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7017 39.001 174.0 386890.0 25 0 69911.0 -1 MIQEQISNL 9 84 546.2728552783714 0 546.2726928591728 PEAK CID FTMS 0 0 0 6999 153836.546875 1.0 0 0.0 18 Oxidation (M) _M(Oxidation (M))IQEQISNL_ CON__P35527;ENSG00000171403|ENST00000246662|KRT9 13.90604991867851 0.2674652324371145 1 PH 2 -1 7.9588 0.0 0.0 0.72981 0.0 0.0 311.1221211531492 542.2774714767589 853.399592629908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PH 0.72981 - 30 + 1 2.173 58019.5 1.0 3545 3470 6999 DOHH2_400M_050219_1,7017 DOHH2_400M_050219_1,7017,MIQEQISNL False False False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 7018 39.015 800.0 37228.0 25 0 4815.9 -1 0 61 845.0693564127298 2532.186239838389 3 845.4045287966728 MULTI CID FTMS 0 0 0 6999 102462.453125 1.0 0 0.0 19 1 SK 2 -1 7.9588 0.0 0.0 0.31431 0.0 0.0 1818.743382027645 495.2902620904906 2314.033644118136 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SK 0.31431 - 21 + 1 2.173 31011.1 0.5299999713897705 3546 3470 6999 DOHH2_400M_050219_1,7018 DOHH2_400M_050219_1,7018, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7020 39.022 213.0 353490.0 25 0 39666.0 41244 VPGKPAAP 8 115 368.72049355588143 735.4264341785629 2 368.7196533083916 MULTI CID FTMS 0 0 0 7019 239655.71875 0.1510414894106465 2 -0.1849746704101562 1 Unmodified _VPGKPAAP_ ENSG00000185504|ENST00000327787|FAAP100;nc|ENSG00000185504|Q0VG06-3|FAAP100 0.7936320650641473 0.8195151834710337 1 W 1 8 16.99 0.0 0.0 2.3102 0.0 0.0 531.3375802740692 0.0 531.3375802740692 0.0 1.4165061435177506 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.3102 - 14 + 1 2.173 67293.1 1.0 3547 3471 7019 DOHH2_400M_050219_1,7020 DOHH2_400M_050219_1,7020,VPGKPAAP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7021 39.027 286.0 261980.0 25 0 28459.0 + 2533 ASDRNIVLY 9 90 525.7827146691898 1049.5508764051797 2 525.7825195193291 MULTI CID FTMS 0 0 0 7019 195801.96875 0.0178649084126996 4 -0.3636627197265625 2 Unmodified _ASDRNIVLY_ ENSG00000164934|ENST00000612750|DCAF13 26.268140514670165 0.1969607489560049 1 {NN|[MP]|[D{I|L}]|[EV]}[NS]RAV{I|L}Y 9 5 + 53.553 0.0 0.0 5.1025 5.1025 82.326 0.0 0.0 0.0 4.149152774571903 42.58409987942095 4.149152774571903 7.447274948966935 0 1.0 1.2218487496163564 0.0 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}[NS]RAV{I|L}Y;{[ET]|[MV]}[QA]RAV{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}N{I|L}V{I|L}Y;{[TV]|[{I|L}S]}[DN]RAV{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}RAV{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}GG{I|L}V{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}[VG]AV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}[NS][HA]A{I|L}[{I|L}P] 5.1025;4.3929;4.2679;4.1279;3.6184;3.3906;2.741;0.67258 -;-;-;-;-;-;-;- 308 1 2.173 64992.5 1.0 3548 3471 7019 DOHH2_400M_050219_1,7021 DOHH2_400M_050219_1,7021,ASDRNIVLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7022 39.029 49.0 1098000.0 25 0 99670.0 10955 GALQLQVPM 9 83 478.7652533246709 0 478.7648498415947 PEAK CID FTMS 0 0 0 7019 839884.5 1.0 0 0.0 3 Unmodified _GALQLQVPM_ ENSG00000127084|ENST00000375482|FGD3;ENST00000467786.1_1_9:95796810-95797868:+|nuORF;nc|ENSG00000127084|Q5JSP0-3|FGD3 18.13498045792455 0.2189554373504223 1 Q{I|L} 2 7 13.271 0.0 0.0 1.3889 0.0 0.0 475.2828432198512 236.06765161685783 711.350494836709 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + Q{I|L} 1.3889 + + 43 + 1 2.173 48757.7 1.0 3549 3471 7019 DOHH2_400M_050219_1,7022 DOHH2_400M_050219_1,7022,GALQLQVPM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7023 39.03 53.0 922430.0 25 0 56820.0 + 28995 QDWLNGKEY 9 86 576.7693662139445 1151.524179494689 2 576.7690917849541 MULTI CID FTMS 0 0 0 7019 751456.3125 0.9001052654353183 -1 0.13067626953125 4 Unmodified _QDWLNGKEY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 43.77239144664712 0.0547478964384323 1 {[QD]|[EN]|[WG]|[KD]|[RS]}W 3 6 23.543 0.0 0.0 2.0445 0.0 0.0 0.0 719.336440807442 719.336440807442 2.0724864601071147 0.0 0.0 0.0 0 0.5 0.0 0.6747425010840047 0.8494850021680094 + {[QD]|[EN]|[WG]|[KD]|[RS]}W 2.0445 + + 306 1 2.173 43816.2 1.0 3550 3471 7019 DOHH2_400M_050219_1,7023 DOHH2_400M_050219_1,7023,QDWLNGKEY True True QDWLNGKEY 39.030184 576.769091784954 10787902.0 7019.0 nc|ENSG00000211896|P01857|IGHG1;;nc|ENSG00000211892|P01861-1|IGHG4;;nc|ENSG00000211893|P01859|IGHG2;;nc|ENSG00000211897|P01860-1|IGHG3;;nc|ENSG00000211893|P01859-1|IGHG2;;nc|ENSG00000211892|P01861|IGHG4;;nc|ENSG00000211897|P01860|IGHG3;;nc|ENSG00000211896|P01857-1|IGHG1 7.995789845784505 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7024 39.032 69.0 1024600.0 25 0 113660.0 + 430 AEEPLAGRTW 10 72 565.2855401940083 1128.5565274548164 2 565.2850219607353 MULTI CID FTMS 0 0 0 7019 773251.0625 0.5803926173334871 -1 0.13067626953125 5 Unmodified _AEEPLAGRTW_ ENST00000529704.5_1_11:67119307-67120167:-|nuORF;ENST00000534515.1_1_11:67119307-67119526:-|nuORF 38.61474834105838 0.1721950110283317 1 {[CP]|[EA]}EP{I|L}A{[NV]|[RG]}TW 10 0 + 45.891 0.0 0.0 4.0663 4.0663 75.288 0.0 0.0 0.0 29.23516269895728 8.226825097560422 8.226825097560422 3.789850105233299 0 0.5 0.0 0.8494850021680094 0.0 + + {[CP]|[EA]}EP{I|L}A{[NV]|[RG]}TW;{[CP]|[EA]}EP{I|L}A[WK]W;{[CP]|[EA]}EP{I|L}A[MN][RV];{[CP]|[EA]}EP{I|L}[C(Carbamidomethyl (C))R][RV];{[MS]|[{M(Oxidation (M))|F}A]}[HA]{I|L}A[WK]W;{[MS]|[{M(Oxidation (M))|F}A]}[HA]{I|L}A{[NV]|[RG]}TW;[{I|L}P]A{[NV]|[RG]}{[WT]|[RM]}E{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}[HA]{I|L}A[MN][RV] 4.0663;3.7305;2.8287;2.2499;1.2496;1.2091;0.89702;0.34783 +;-;-;-;-;-;-;- + 98 + 1 2.173 59532.4 1.0 3551 3471 7019 DOHH2_400M_050219_1,7024 DOHH2_400M_050219_1,7024,AEEPLAGRTW False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7025 39.034 103.0 727670.0 25 0 123620.0 + 15776 ISEAGKDLLY 10 94 554.7978036507559 1107.5810543683117 2 554.7975341677666 MULTI CID FTMS 0 0 0 7019 601227.625 0.5098075357233632 -1 0.13067626953125 6 Unmodified _ISEAGKDLLY_ ENSG00000119397|ENST00000373855|CNTRL;ENST00000373851.6_1_9:123874787-123912836:+|nuORF;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 81.9152076656658 0.0154982280583276 1 {[TV]|[{I|L}S]}[NG]{I|L}ES{I|L}{I|L}Y 10 5 + 80.015 0.0 0.0 7.2243 7.2243 86.09 0.0 0.0 0.0 15.892718607161171 16.53212513775344 15.892718607161171 4.330984399557423 0 0.8494850021680094 1.5228787452803376 1.6906140654642814 0.0 {[TV]|[{I|L}S]}[NG]{I|L}ES{I|L}{I|L}Y;{[TV]|[{I|L}S]}EA{[NV]|[RG]}S{I|L}{I|L}Y;{[TV]|[{I|L}S]}[NG]{I|L}{I|L}TD{I|L}Y;{[TV]|[{I|L}S]}[NG]{I|L}TD{I|L}{I|L}Y;{[TV]|[{I|L}S]}[NG]{I|L}{I|L}ES{I|L}Y;{[TV]|[{I|L}S]}[NG]{I|L}E{I|L}S{I|L}Y;{[TV]|[{I|L}S]}EA[KG]D{I|L}{I|L}Y;{[TV]|[{I|L}S]}{[NV]|[RG]}AES{I|L}{I|L}Y;{[TV]|[{I|L}S]}EA{[NV]|[RG]}{I|L}S{I|L}Y;{[TV]|[{I|L}S]}[NG]{I|L}T{I|L}D{I|L}Y 7.2243;6.8333;6.7533;6.7216;6.6778;6.478;6.3306;6.3175;6.087;6.0508 -;-;-;-;-;-;+;-;-;- + 1427 1 2.173 64375.1 1.0 3552 3471 7019 DOHH2_400M_050219_1,7025 DOHH2_400M_050219_1,7025,ISEAGKDLLY True True ISEAGKDLLY 39.034042 554.797534167767 6516285.5 7019.0 ENST00000373851.6_1_9:123874787-123912836:+|nuORF;;nc|ENSG00000119397|Q7Z7A1-5|CNTRL;;ENSG00000119397|ENST00000373855|CNTRL 5.781051476796468 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7026 39.036 106.0 758140.0 25 0 77744.0 + 7105 EEMGDYIRSY 10 82 631.7708875743933 1261.5272222155866 2 631.7706176638603 MULTI CID FTMS 0 0 0 7019 489573.71875 0.9182996406486168 -1 0.13067626953125 7 Unmodified _EEMGDYIRSY_ ENSG00000125633|ENST00000376300|CCDC93 67.83816525789305 0.0190062514522628 1 EEMGDY{I|L}RSY 10 0 + 89.856 0.0 0.0 7.1228 7.1228 95.577 0.0 0.0 0.0 69.35439267480197 18.66557978072385 18.66557978072385 31.880142566401503 0 0.5 1.6989700043360187 1.41944517631652 0.3494850021680094 + + EEMGDY{I|L}RSY;[HM]R{I|L}YDGM[HC];[HM]R{I|L}YDGC[HM];[HM]R{I|L}YDC(Carbamidomethyl (C))[HM];{[YD]|[{M(Oxidation (M))|F}M]}G[R{I|L}]MHM[HC];{[YD]|[{M(Oxidation (M))|F}M]}G[{I|L}V]GMHM[HC];{[YD]|[{M(Oxidation (M))|F}M]}[R{I|L}]GMHM[HC];{[YD]|[{M(Oxidation (M))|F}M]}G[R{I|L}][NP]GM[HC];[{M(Oxidation (M))|F}E]M[WM]{I|L}RSY;{[YD]|[{M(Oxidation (M))|F}M]}G[{I|L}V]G[NP]GM[HC] 7.1228;4.5957;3.4845;2.6649;2.6209;2.5253;2.3823;2.1331;2.0819;2.0404 +;-;-;-;-;-;-;-;-;- + 286 + 1 2.173 66423.2 1.0 3553 3471 7019 DOHH2_400M_050219_1,7026 DOHH2_400M_050219_1,7026,EEMGDYIRSY True True EEMGDYIRSY 39.036319 631.77061766386 3521912.75 7019.0 ENSG00000125633|ENST00000376300|CCDC93 8.54595915476481 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7027 39.039 155.0 395310.0 25 0 46072.0 + 38574 TTDFPGNYSGY 11 84 611.2567360477443 1220.4989191622883 2 611.2557250857353 MULTI CID FTMS 0 0 0 7019 349945.34375 0.2480126653273662 -6 0.5517463684082031 8 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 75.76082778847304 0.0157096510099958 1 YSGY 4 7 30.31 0.0 0.0 2.4834 0.0 0.0 732.3084112050605 0.0 732.3084112050605 0.0 9.534021960761264 0.0 0.0 0 0.4247425010840047 0.0 0.5796896906561032 0.0 + YSGY 2.4834 + + 468 + 1 2.173 50151.5 1.0 3554 3471 7019 DOHH2_400M_050219_1,7027 DOHH2_400M_050219_1,7027,TTDFPGNYSGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7028 39.042 153.0 566610.0 25 0 167280.0 + 30498 REFPDRLVGY 10 66 626.3276433981918 1250.6407338631834 2 626.3268310427666 MULTI CID FTMS 0 0 0 7019 293235.75 0.5291214780754651 -2 0.239166259765625 9 Unmodified _REFPDRLVGY_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 33.82136114134338 0.222812100547209 1 [VG]E{M(Oxidation (M))|F} 4 9 39.57 0.0 0.0 3.164 0.0 0.0 0.0 815.4007274533667 815.4007274533667 23.37205316164642 0.0 0.0 0.0 0 1.0356668758921828 1.2218487496163564 0.3807196863200844 0.0 [VG]E{M(Oxidation (M))|F} 3.164 - 70 + 1 2.173 68752.3 1.0 3555 3471 7019 DOHH2_400M_050219_1,7028 DOHH2_400M_050219_1,7028,REFPDRLVGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7029 39.045 145.0 360690.0 25 0 34750.0 + + 2518 VEGFIPKNY 9 84 533.2790582279249 1064.5435635226495 2 533.7815429568291 MULTI CID FTMS 0 0 0 7019 262373.625 1.0 0 0.0 10 Unmodified _ASAKYLGRPC_ ENSG00000189152|ENST00000344415|GRAPL;ENST00000571380.1_1_17:18939269-18950305:-|nuORF;ENSG00000154016|ENST00000284154|GRAP;nc|ENSG00000189152|Q8TC17-2|GRAPL 8.155526934196011 0.6889124077178598 1 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}A 5 -1 31.171 0.0 0.0 2.9281 0.0 0.0 0.0 558.2836507631372 558.2836507631372 4.849687489829218 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}A 2.9281 - 127 1 2.173 48921.1 1.0 3556 3471 7019 DOHH2_400M_050219_1,7029 DOHH2_400M_050219_1,7029,ASAKYLGRPC False False VEGFIPKNY 39.045363 533.781542956829 1486481.125 7019.0 ENSG00000189152|ENST00000344415|GRAPL;;ENST00000571380.1_1_17:18939269-18950305:-|nuORF;;ENSG00000154016|ENST00000284154|GRAP;;nc|ENSG00000189152|Q8TC17-2|GRAPL 7.470685799916585 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7030 39.049 203.0 480600.0 25 0 83391.0 + 11128 GEIDPLNRRF 10 94 406.2201207424411 0 406.2190124392509 PEAK CID FTMS 0 0 0 7019 276211.9375 0.990454579326566 -1 0.13067626953125 11 Unmodified _GEIDPLNRRF_ ENSG00000044446|ENST00000379942|PHKA2;ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1 12.240655878213236 0.3578162629684178 1 S 1 10 6.9897 0.0 0.0 0.86247 0.0 0.0 405.2022216100791 315.1683443658813 720.3705659759604 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.86247 - 14 + 1 2.173 84630.5 1.0 3557 3471 7019 DOHH2_400M_050219_1,7030 DOHH2_400M_050219_1,7030,GEIDPLNRRF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7031 39.054 254.0 516010.0 25 0 46578.0 + 25727 NIKPEIVSV 9 129 499.7974316844156 997.5803104356312 2 499.7969543337822 MULTI CID FTMS 0 0 0 7019 244843.78125 0.4978587944282523 -1 0.13067626953125 12 Unmodified _NIKPEIVSV_ ENSG00000131504|ENST00000389054|DIAPH1;nc|ENSG00000131504|O60610-2|DIAPH1;nc|ENSG00000131504|O60610-3|DIAPH1 60.07390631473393 0.0260411565414776 1 [EP]{I|L}VKQVSV 9 6 + 53.031 0.0 0.0 5.316 5.316 80.324 0.0 0.0 0.0 4.544225499292551 10.330145895351848 4.544225499292551 4.544225499292551 0 1.0682503180159344 0.5376020021010439 0.3494850021680094 0.3054621874040891 [EP]{I|L}VKQVSV;{[QV]|[N{I|L}]|[RA]|[KV]}K[EP]{I|L}VSV;[EP]{I|L}KVQVSV;[DP]{I|L}{I|L}KQVSV;[EP]{I|L}KN{I|L}VSV;[EP]{I|L}VK[AG]VSV;[EP]{I|L}VKN{I|L}SV;[EP]{I|L}KV[AG]VSV;[DP]{I|L}{I|L}K[AG]VSV;[EP]{I|L}KGG{I|L}VSV 5.316;4.8604;4.7124;4.4956;4.4107;4.3929;3.8053;3.7894;3.5725;3.4876 -;+;-;-;-;-;-;-;-;- + 1061 1 2.173 102081.5 1.0 3558 3471 7019 DOHH2_400M_050219_1,7031 DOHH2_400M_050219_1,7031,NIKPEIVSV True True NIKPEIVSV 39.053938 499.796954333782 2718366.25 7019.0 nc|ENSG00000131504|O60610-3|DIAPH1;;nc|ENSG00000131504|O60610-2|DIAPH1;;ENSG00000131504|ENST00000389054|DIAPH1 3.3595492045084634 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7032 39.057 179.0 270730.0 25 0 17728.0 + 581 AEIPQQVVGY 10 76 552.2893418956706 1102.5641308581412 2 552.2891723513603 MULTI CID FTMS 0 0 0 7019 248424.296875 0.7060404929969939 1 -0.1093177795410156 13 Unmodified _AEIPQQVVGY_ ENSG00000085719|ENST00000517490|CPNE3 18.1463463914782 0.5430639438673815 1 VDVT{I|L}GY 7 8 42.963 0.0 0.0 3.8967 0.0 0.0 337.16521835989744 0.0 337.16521835989744 0.0 31.5637324474082 0.0 0.0 0 0.6989700043360187 0.0 0.4247425010840047 0.0 VDVT{I|L}GY 3.8967 - 200 + 1 2.173 43174.2 1.0 3559 3471 7019 DOHH2_400M_050219_1,7032 DOHH2_400M_050219_1,7032,AEIPQQVVGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7033 39.061 200.0 356140.0 25 0 42867.0 + -1 ADVVVSRW 8 91 466.2535827230221 930.4926125128442 2 466.2528869509697 MULTI CID FTMS 0 0 0 7019 241709.03125 1.0 0 0.0 14 Carbamidomethyl (C) _DAVVRVIC(Carbamidomethyl (C))_ ENSG00000169710|ENST00000306749|FASN 21.74664581756881 0.5868176546531598 1 {[DA]|[EG]}VVV[C(Carbamidomethyl (C))R]{I|L} 8 -1 + 48.249 0.0 0.0 5.1853 5.1853 80.843 0.0 0.0 0.0 31.701877825604964 1.4266750356873104 1.4266750356873104 5.642714304385628 0 1.305462187404089 1.154901959985743 0.0 0.0 {[DA]|[EG]}VVV[C(Carbamidomethyl (C))R]{I|L};WVVV[WD]K;{[DA]|[EG]}[R{M(Oxidation (M))|F}][{I|L}A]A[PA];{[DA]|[EG]}[R{M(Oxidation (M))|F}][RV][PA] 5.1853;4.5789;0.7477;0.37501 -;-;-;- 128 + 1 2.173 58813.2 1.0 3560 3471 7019 DOHH2_400M_050219_1,7033 DOHH2_400M_050219_1,7033,DAVVRVIC False False ADVVVSRW 39.061242 466.25288695097 1402264.375 7019.0 ENSG00000169710|ENST00000306749|FASN 3.806065519650777 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7034 39.065 183.0 534760.0 25 0 37905.0 + 5195 DIRPKISL 8 114 471.2928217274052 940.5710905216104 2 471.2920410037041 MULTI CID FTMS 0 0 0 7019 214420.640625 0.5088273884268188 -1 0.13067626953125 15 Unmodified _DIRPKISL_ ENSG00000198919|ENST00000361582|DZIP3;ENST00000495008.5_1_3:108355483-108366962:+|nuORF 55.50274090549119 0.1141693163797808 1 D{I|L}R 3 5 42.669 0.0 0.0 4.5365 0.0 0.0 0.0 553.3315523736936 553.3315523736936 13.327731244245346 0.0 0.0 0.0 0 0.7887254899964358 1.6989700043360187 0.0 0.0 + D{I|L}R 4.5365 + + 264 + 1 2.173 81198.4 1.0 3561 3471 7019 DOHH2_400M_050219_1,7034 DOHH2_400M_050219_1,7034,DIRPKISL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7035 39.079 800.0 250560.0 25 0 34414.0 -1 0 101 905.4481549086664 1808.8817568841323 2 905.4556762576104 MULTI CID FTMS 0 0 0 7019 172112.109375 0.2545445239018479 -4 0.4332389831542969 16 1 H{I|L}PD{[QV]|[N{I|L}]|[RA]|[KV]}QE[C(Carbamidomethyl (C))K]{I|L}H{I|L} 13 -1 83.265 0.0 0.0 4.6031 0.0 0.0 0.0 208.07293115787343 208.07293115787343 50.8945884376929 0.0 0.0 0.0 0 1.6307196863200843 1.6989700043360187 0.4247425010840047 0.0 H{I|L}PD{[QV]|[N{I|L}]|[RA]|[KV]}QE[C(Carbamidomethyl (C))K]{I|L}H{I|L} 4.6031 - 1496 + 1 2.173 133814.9 0.6899999976158142 3562 3471 7019 DOHH2_400M_050219_1,7035 DOHH2_400M_050219_1,7035, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7036 39.085 283.0 330960.0 25 0 28261.0 + 30500 REFPDRLVGY 10 98 417.8874124200154 1250.6404078602463 3 417.8866454958916 MULTI CID FTMS 0 0 0 7019 173793.859375 0.7573550955330526 -1 0.13067626953125 17 Unmodified _REFPDRLVGY_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 28.270515756011903 0.3335101494214266 1 {[RE]|[WV]}{M(Oxidation (M))|F}PDR{I|L}VGY 10 0 + 61.362 0.0 0.0 4.9064 4.9064 83.215 0.0 0.0 0.0 5.764837301042718 45.163800089887545 5.764837301042718 9.164539485499256 0 1.6435078169319297 0.0 0.0 0.7302046884880937 + + {[RE]|[WV]}{M(Oxidation (M))|F}PDR{I|L}VGY;{[RE]|[WV]}{M(Oxidation (M))|F}PD[VG]{I|L}VGY;{[RE]|[WV]}{M(Oxidation (M))|F}PD[VG]{I|L}RY;[HT]V{I|L}RDP[WD]{I|L};{[RE]|[WV]}{M(Oxidation (M))|F}PDK{I|L}[PS]Y;{[RE]|[WV]}VV[WM]{I|L}VGY;{[RE]|[WV]}{M(Oxidation (M))|F}PDK{I|L}V[{M(Oxidation (M))|F}T];[HT]V{I|L}R[HC]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L} 4.9064;4.1736;3.6295;2.8268;2.5643;2.4811;2.2247;1.8706 +;-;-;-;-;-;-;- + 171 1 2.173 78497.2 1.0 3563 3471 7019 DOHH2_400M_050219_1,7036 DOHH2_400M_050219_1,7036,REFPDRLVGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7037 39.099 800.0 119730.0 25 0 14577.0 + 13103 HEQEAILHNF 10 119 619.3004889422144 1236.5864249512288 2 619.2999145388603 MULTI CID FTMS 0 0 0 7019 125390.0234375 1.0 0 0.0 18 Unmodified _HEQEAILHNF_ chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;nc|ENSG00000148773|P46013-2|MKI67 78.06048673739656 0.0186573233964999 1 {[YC]|[HE]}QEA{I|L}{I|L}H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 10 0 + 48.42 0.0 0.0 3.9156 3.9156 79.616 0.0 0.0 0.0 8.960375765055268 18.292060657118032 8.960375765055268 9.164539485499247 0 1.873712505420024 0.0 1.0228787452803376 0.0 + + {[YC]|[HE]}QEA{I|L}{I|L}H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[YC]|[HE]}[AG]EA{I|L}{I|L}H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[YC]|[HE]}[PA]{[DS]|[MA]|[CV]|TT}A{I|L}H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[RE]|[WV]}A[YG]H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HE{I|L}A{I|L}H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[WP][HC]{I|L}A{I|L}H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[YC]|[HE]}[PA]C(Carbamidomethyl (C)){I|L}{I|L}H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}[KG]{I|L}H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HT][YK]A[YG]H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[RE]|[WV]}[YK]H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 3.9156;3.1745;3.1012;2.9228;2.8511;2.8047;2.5442;2.4726;2.3782;2.1476 +;-;-;-;-;-;-;-;-;- + 408 1 2.173 76129.2 0.6899999976158142 3564 3471 7019 DOHH2_400M_050219_1,7037 DOHH2_400M_050219_1,7037,HEQEAILHNF True True HEQEAILHNF 39.098823 619.29991453886 573996.4375 7019.0 nc|ENSG00000148773|P46013-2|MKI67;;ENSG00000148773|ENST00000368654|MKI67;;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67 7.294247150421143 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7038 39.113 800.0 151760.0 25 0 13507.0 + 43437 WSDYSDNLKY 10 131 645.7851249707093 1289.5556970082184 2 645.7847167849541 MULTI CID FTMS 0 0 0 7019 116119.0546875 1.0 0 0.0 19 Unmodified _WSDYSDNLKY_ ENSG00000196150|ENST00000417550|ZNF250;nc|ENSG00000196150|P15622-2|ZNF250;nc|ENSG00000196150|P15622|ZNF250 49.52724829834842 0.0829255630816734 1 WSDYSDN{I|L}KY 10 0 + 83.595 0.0 0.0 6.4825 6.4825 86.687 0.0 0.0 0.0 26.15423952885944 6.989700043360188 6.989700043360188 6.989700043360188 0 0.8019020776254365 1.6989700043360187 0.0 0.5501648626366046 + + WSDYSDN{I|L}KY;WSDYSDN{I|L}YK;WSDYSDGG{I|L}KY;WSDYSDGG{I|L}YK;WSDYR{M(Oxidation (M))|F}[KG][MT];{[DA]|[EG]}SD{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YR]KY;{[QV]|[N{I|L}]|[RA]|[KV]}[H{I|L}]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YDS[PA];{[QV]|[N{I|L}]|[RA]|[KV]}[H{I|L}]{[CA]|SS}SYDS[PA];{[QV]|[N{I|L}]|[RA]|[KV]}D[RK][C(Carbamidomethyl (C))D]DS[PA];{[DA]|[EG]}SD{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YR]YK 6.4825;5.9404;5.7718;5.2298;3.6402;2.0151;1.9031;1.8738;1.7232;1.4731 +;-;-;-;-;-;-;-;-;- + 461 + 1 2.173 94398.1 0.6700000166893005 3565 3471 7019 DOHH2_400M_050219_1,7038 DOHH2_400M_050219_1,7038,WSDYSDNLKY True True WSDYSDNLKY 39.112654 645.784716784954 813626.0 7019.0 nc|ENSG00000196150|P15622-2|ZNF250;;ENSG00000196150|ENST00000417550|ZNF250;;nc|ENSG00000196150|P15622|ZNF250 7.377296447753906 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7039 39.124 658.0 120740.0 25 0 9090.5 + 42971 VVTGRLAIY 9 147 496.3013111137552 990.5880692943103 2 496.3006164431572 MULTI CID FTMS 0 0 0 7019 88081.7265625 1.0 0 0.0 20 Unmodified _VVTGRLAIY_ REV__ENSG00000125885|ENST00000610722|MCM8;REV__nc|ENSG00000125885|Q9UJA3-2|MCM8;REV__nc|ENSG00000125885|Q9UJA3-3|MCM8;REV__nc|ENSG00000125885|Q9UJA3-4|MCM8 8.593279151180031 0.6146971463335029 1 {M(Oxidation (M))|F} 1 -1 12.764 0.0 0.0 1.2885 0.0 0.0 825.5089504972385 0.0 825.5089504972385 0.0 0.7745097999287154 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2885 - 132 + 1 2.173 63629.2 1.0 3566 3471 7019 DOHH2_400M_050219_1,7039 DOHH2_400M_050219_1,7039,VVTGRLAIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7041 39.129 54.0 929560.0 25 0 196410.0 + 42708 VVAGDRPR 8 75 435.2515280440389 868.4885031548779 2 435.2505981326103 MULTI CID FTMS 0 0 0 7040 1157287.75 0.8125645519262541 3 -0.2543449401855469 1 Unmodified _VVAGDRPR_ REV__ENSG00000116329|ENST00000234961|OPRD1 0.7936320650641473 0.8195151834710337 1 T 1 -1 3.9794 0.0 0.0 0.4582 0.0 0.0 434.2398592113216 330.1714266412719 764.4112858525936 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.4582 - 1 + 1 2.178 44285.6 1.0 3567 3472 7040 DOHH2_400M_050219_1,7041 DOHH2_400M_050219_1,7041,VVAGDRPR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7042 39.133 169.0 308000.0 25 0 32443.0 + 32887 SEIGKAVGF 9 88 454.2474826440949 906.48041235499 2 454.2471191287041 MULTI CID FTMS 0 0 0 7040 169287.328125 0.1183092586894888 2 -0.1558074951171875 2 Unmodified _SEIGKAVGF_ ENSG00000092853|ENST00000318121|CLSPN;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN 16.942295170755138 0.3780752226737986 1 {[ES]|[DT]|[{I|L}C]}{I|L}[HA]A{I|L} 7 5 15.718 0.0 0.0 1.734 0.0 0.0 0.0 182.09426294498283 182.09426294498283 2.619025876622913 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}[HA]A{I|L} 1.734 - 49 + 1 2.178 47082.7 1.0 3568 3472 7040 DOHH2_400M_050219_1,7042 DOHH2_400M_050219_1,7042,SEIGKAVGF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7043 39.134 42.0 1454300.0 25 0 116150.0 + 16232 IVNRLLPSA 9 89 491.8058428952296 981.5971328572592 2 491.8060485720634 MULTI CID FTMS 0 0 0 7040 915033.1875 0.474549756455247 -1 0.1093177795410156 3 Unmodified _IVNRLLPSA_ REV__ENSG00000222018|ENST00000410005|C21orf140 32.30548876998284 0.1201446275138228 1 [{I|L}V]C(Carbamidomethyl (C)){I|L} 4 -1 33.104 0.0 0.0 3.3725 0.0 0.0 0.0 493.2889803522094 493.2889803522094 15.145228064085998 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]C(Carbamidomethyl (C)){I|L} 3.3725 - 156 + 1 2.178 51312.3 1.0 3569 3472 7040 DOHH2_400M_050219_1,7043 DOHH2_400M_050219_1,7043,IVNRLLPSA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7044 39.136 79.0 680980.0 25 0 59010.0 + 18008 KSDVHLNFY 9 81 561.782287135292 1121.550021337384 2 561.7827636599541 MULTI CID FTMS 0 0 0 7040 709693.4375 0.5685506640746381 -1 0.1093177795410156 4 Unmodified _KSDVHLNFY_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 38.17557092003332 0.0854718145212029 1 [HV]DSK{I|L}N{M(Oxidation (M))|F}Y 9 4 + 59.235 0.0 0.0 5.2816 5.2816 81.333 0.0 0.0 0.0 2.191512336730028 41.35249585179414 2.191512336730028 5.897554856604174 0 0.9247425010840048 0.0 0.0 0.7134679910804405 [HV]DSK{I|L}N{M(Oxidation (M))|F}Y;[HV]DS{I|L}KN{M(Oxidation (M))|F}Y;K{[CP]|[EA]}N{I|L}KS[W{M(Oxidation (M))|F}];[HV]DS{I|L}NK{M(Oxidation (M))|F}Y;[HV]DSK{I|L}GG{M(Oxidation (M))|F}Y;K{[CP]|[EA]}NK{I|L}S[W{M(Oxidation (M))|F}];[H{I|L}][C(Carbamidomethyl (C))R]{I|L}N{M(Oxidation (M))|F}Y;[HV]DS{I|L}KGG{M(Oxidation (M))|F}Y;K{[CP]|[EA]}KN{I|L}S[W{M(Oxidation (M))|F}];K{[CP]|[EA]}GG{I|L}KS[W{M(Oxidation (M))|F}] 5.2816;4.7557;4.5327;4.4873;4.4605;4.0069;3.9943;3.9347;3.7384;3.7117 -;-;-;-;-;-;-;-;-;- 446 1 2.178 46761.9 1.0 3570 3472 7040 DOHH2_400M_050219_1,7044 DOHH2_400M_050219_1,7044,KSDVHLNFY True True KSDVHLNFY 39.13566 561.782763659954 15815601.625 7040.0 ENSG00000071794|ENST00000310053|HLTF;;nc|ENSG00000071794|Q14527-2|HLTF 6.075662612915039 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7045 39.138 96.0 941840.0 25 0 91753.0 + 2505 ARIAAKLTPI 10 98 351.89758741705543 1052.6709328513664 3 351.8973876833916 MULTI CID FTMS 0 0 0 7040 706690.8125 1.0 0 0.0 5 Unmodified _ARIAAKLTPI_ REV__ENSG00000184156|ENST00000388996|KCNQ3;REV__ENST00000519589.1_1_8:133141511-133152462:-|nuORF;REV__nc|ENSG00000184156|O43525-2|KCNQ3 13.042465956692816 0.6287021003332052 1 {I|L}T{I|L}P{I|L} 5 -1 25.886 0.0 0.0 2.459 0.0 0.0 497.3068714826188 0.0 497.3068714826188 0.0 11.906140654642812 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.0 {I|L}T{I|L}P{I|L} 2.459 - 148 1 2.178 84991.2 1.0 3571 3472 7040 DOHH2_400M_050219_1,7045 DOHH2_400M_050219_1,7045,ARIAAKLTPI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7046 39.139 73.0 792320.0 25 0 79561.0 + 26080 NPASKVIAL 9 90 456.7789121185546 911.5432713039093 2 456.7791320681572 MULTI CID FTMS 0 0 0 7040 539641.375 0.6173233374887357 -1 0.1093177795410156 6 Unmodified _NPASKVIAL_ ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC 36.12702656103203 0.0967173616627612 1 [NP]A 3 6 31.681 0.0 0.0 3.4756 0.0 0.0 0.0 626.3879728022092 626.3879728022092 14.848462221995216 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.75 + [NP]A 3.4756 + + 68 1 2.178 51697.4 1.0 3572 3472 7040 DOHH2_400M_050219_1,7046 DOHH2_400M_050219_1,7046,NPASKVIAL True True NPASKVIAL 39.139448 456.779132068157 4822742.0 7040.0 ENSG00000070371|ENST00000427926|CLTCL1;;nc|ENSG00000070371|P53675-2|CLTCL1;;nc|ENSG00000141367|Q00610-2|CLTC;;ENSG00000141367|ENST00000269122|CLTC 0.0685608088970184 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7047 39.145 329.0 451760.0 25 0 42156.0 + + 16132 DMLQREMM 8 139 527.3425761051179 1052.6705992770358 2 527.3429443240166 MULTI CID FTMS 0 0 0 7040 333427.9375 1.0 0 0.0 7 Unmodified _ITTKKPRPL_ nc|ENSG00000089876|Q7L7V1-2|DHX32;ENSG00000089876|ENST00000284690|DHX32 30.63653989081413 0.1413794767160703 1 T{I|L}KV 4 -1 55.379 0.0 0.0 5.2609 0.0 0.0 0.0 608.3549005684471 608.3549005684471 23.094121881344435 0.0 0.0 0.0 0 0.791235974569971 1.6989700043360187 0.0 0.3054621874040891 T{I|L}KV 5.2609 - 185 + 1 2.178 117243.0 1.0 3573 3472 7040 DOHH2_400M_050219_1,7047 DOHH2_400M_050219_1,7047,ITTKKPRPL False False DMLQREMM 39.145448 527.342944324017 574787.8125 7040.0 nc|ENSG00000089876|Q7L7V1-2|DHX32;;ENSG00000089876|ENST00000284690|DHX32 1.3665141612291336 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7048 39.148 153.0 428900.0 25 0 47304.0 + 40563 VKGKSGSG 8 103 360.2065060217567 718.3984591103134 2 360.2062866091728 MULTI CID FTMS 0 0 0 7040 315409.1875 0.0812336250537394 3 -0.2543449401855469 8 Unmodified _VKGKSGSG_ REV__ENST00000473395.1_1_2:198365100-198366019:+|nuORF 0.0 0.8243325171867699 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.178 55164.0 1.0 3574 3472 7040 DOHH2_400M_050219_1,7048 DOHH2_400M_050219_1,7048,VKGKSGSG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7049 39.152 181.0 373600.0 25 0 33262.0 + -1 DVQKKLMSL 9 105 531.3015725086016 530.2942960420015 1 531.3049804568291 MULTI CID FTMS 0 0 0 7040 278285.875 0.1573037431274156 9 -0.980487823486328 9 nc|ENSG00000100815|Q15643-2|TRIP11;ENSG00000100815|ENST00000267622|TRIP11 1 [DV]Q 3 -1 25.686 0.0 0.0 4.8438 0.0 0.0 0.0 185.1169333313172 185.1169333313172 2.256499699645857 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [DV]Q 4.8438 - 55 1 2.178 56247.0 1.0 3575 3472 7040 DOHH2_400M_050219_1,7049 DOHH2_400M_050219_1,7049, False False DVQKKLMSL 39.151987 531.304980456829 1749370.875 7040.0 nc|ENSG00000100815|Q15643-2|TRIP11;;ENSG00000100815|ENST00000267622|TRIP11 5.918126583099365 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7050 39.159 372.0 297470.0 25 0 34574.0 + 29814 QQIQKVIL 8 138 485.3074510777424 968.6003492222848 2 485.3080322146416 MULTI CID FTMS 0 0 0 7040 227045.40625 1.0 0 0.0 10 Unmodified _QQIQKVIL_ ENSG00000156976|ENST00000323963|EIF4A2;ENST00000466362.1_1_3:186502860-186504086:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2 24.67388899826682 0.525179942228231 1 [HT]{I|L}QKV{I|L} 7 3 20.548 0.0 0.0 2.1214 0.0 0.0 0.0 146.08051313326237 146.08051313326237 5.247607675246709 0.0 0.0 0.0 0 0.0 0.4436974992327127 0.5 0.5994850021680094 [HT]{I|L}QKV{I|L} 2.1214 - 589 1 2.178 88106.2 1.0 3576 3472 7040 DOHH2_400M_050219_1,7050 DOHH2_400M_050219_1,7050,QQIQKVIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7051 39.163 220.0 269600.0 25 0 31516.0 + 39653 VEASTLNQL 9 98 487.76197919825336 973.5094054633068 2 487.7612487673759 MULTI CID FTMS 0 0 0 7040 106072.53125 0.8755061686202377 -1 0.1093177795410156 11 Unmodified _VEASTLNQL_ REV__ENSG00000073792|ENST00000382199|IGF2BP2;REV__ENST00000435000.2_1_1:146523764-146523956:+|nuORF;REV__ENST00000464166.1_1_3:185364758-185367298:-|nuORF;REV__nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;REV__nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;REV__nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;REV__nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;REV__nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2 23.1484247019978 0.2366544122328345 1 {NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[QN]|[E{I|L}]|[KN]}{I|L}{I|L} 8 -1 {NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[QN]|[E{I|L}]|[KN]}{I|L} + + 13.979 2.2135 0.26276 1.436 1.436 48.497 0.0 0.0 0.0 0.0 -7.786596949921218 -7.786596949921218 0.0 0 0.0 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[QN]|[E{I|L}]|[KN]}{I|L}{I|L} 1.436 - 103 + 1 2.178 51648.3 1.0 3577 3472 7040 DOHH2_400M_050219_1,7051 DOHH2_400M_050219_1,7051,VEASTLNQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7052 39.173 589.0 186650.0 25 0 29649.0 + 12284 GRRIPVSL 8 139 449.2849745661052 896.5553961990105 2 449.2849914431572 MULTI CID FTMS 0 0 0 7040 101913.828125 1.0 0 0.0 12 Unmodified _GRRIPVSL_ ENSG00000181656|ENST00000315033|GPR88 14.581692164780916 0.6954967302934248 1 {M(Oxidation (M))|F} 1 8 14.604 0.0 0.0 1.6289 0.0 0.0 731.476109555259 0.0 731.476109555259 0.0 0.0514997831990609 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.6289 - 40 + 1 2.178 89879.4 1.0 3578 3472 7040 DOHH2_400M_050219_1,7052 DOHH2_400M_050219_1,7052,GRRIPVSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7053 39.186 739.0 218290.0 25 0 14223.0 + 24542 MLAKHVITL 9 167 513.3127111138675 1024.610869294535 2 513.3130981326103 MULTI CID FTMS 0 0 0 7040 85156.90625 0.4287925107126492 -1 0.1093177795410156 13 Unmodified _MLAKHVITL_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 51.629811660486645 0.0367964933207742 1 M{I|L}AKH{I|L}{I|L}S{I|L} 9 2 + 50.097 0.0 0.0 4.8893 4.8893 80.827 0.0 0.0 0.0 19.94119934212876 6.692675798053756 6.692675798053756 6.613660364717589 0 0.8979400086720375 2.0 0.4698565171985375 0.0 M{I|L}AKH{I|L}{I|L}S{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AKHV{I|L}T{I|L};[HV]{I|L}KCV{I|L}T{I|L};[HV]{I|L}KAM{I|L}T{I|L};[HV]{I|L}KA{I|L}MT{I|L};[HV][KA]{I|L}M{I|L}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[H{I|L}][KG]{I|L}T{I|L};[HV][KA]{I|L}{I|L}MT{I|L};{[MG]|[TS]}[RV]HV{I|L}T{I|L};[KA][HV]{I|L}M{I|L}T{I|L} 4.8893;4.2439;2.8618;2.8618;2.2742;2.1504;2.0692;1.5628;1.278;1.1951 -;+;-;-;-;-;-;-;-;- + 491 + 1 2.178 122439.2 1.0 3579 3472 7040 DOHH2_400M_050219_1,7053 DOHH2_400M_050219_1,7053,MLAKHVITL True True MLAKHVITL 39.185943 513.31309813261 963006.4375 7040.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 4.569902261098226 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7054 39.2 800.0 145860.0 25 0 8773.2 + + 29084 QEIDGRFTSI 10 157 583.2955643051002 0 583.2954589724541 PEAK CID FTMS 0 0 0 7040 84537.6484375 0.8444228802551493 -1 0.1093177795410156 14 Unmodified _QELSYHYLL_ ENSG00000160007|ENST00000672722|ARHGAP35 68.08070601005525 0.0150358085444205 1 E{I|L}{I|L}[DV]D{I|L} 7 -1 31.194 0.0 0.0 2.6786 0.0 0.0 128.05894979985038 236.0677431695922 364.1266929694426 0.0 0.0 0.0 0.0 0 0.8441876774005248 0.0 0.7302046884880937 0.0 E{I|L}{I|L}[DV]D{I|L} 2.6786 - 526 + 1 2.178 87949.4 0.550000011920929 3580 3472 7040 DOHH2_400M_050219_1,7054 DOHH2_400M_050219_1,7054,QELSYHYLL False False QEIDGRFTSI 39.199777 583.295458972454 1107039.375 7040.0 ENSG00000160007|ENST00000672722|ARHGAP35 5.305559794108073 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7056 39.216 800.0 129960.0 25 0 11379.0 + 6748 EDRCRACLPQ 10 138 595.7752723989154 1189.535991864631 2 595.7746459841728 MULTI CID FTMS 0 0 0 7055 31668.72265625 0.1332521764113595 2 -0.1786880493164062 1 Unmodified _EDRCRACLPQ_ REV__ENSG00000158286|ENST00000377939|RNF207;REV__ENST00000496676.5_1_1:6268943-6270476:+|nuORF 9.38312468134398 0.6832340498775793 1 ESTESTN{[VA]|[{I|L}G]}RP 11 -1 + 39.262 0.0 0.0 3.3006 3.3006 70.355 0.0 0.0 0.0 22.089932326668528 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.0796896906561032 1.2218487496163564 0.3807196863200844 0.0 ESTESTN{[VA]|[{I|L}G]}RP;ESTESTN{[VA]|[{I|L}G]}PR;ESTESTN{[QV]|[N{I|L}]|[RA]|[KV]}VP;ESTESTN[R{I|L}]GP;ESTESTN{[QV]|[N{I|L}]|[RA]|[KV]}PV;E[WM]STN{[VA]|[{I|L}G]}RP;E[WM]STN{[VA]|[{I|L}G]}PR;E[WM]STN{[QV]|[N{I|L}]|[RA]|[KV]}VP;E[WM]STN[R{I|L}]GP;E[WM]STN{[QV]|[N{I|L}]|[RA]|[KV]}PV 3.3006;3.1526;2.2662;2.1721;2.0834;2.0548;1.9067;1.0204;0.92623;0.83753 -;-;-;-;-;-;-;-;-;- 456 + 1 2.178 81959.4 0.6499999761581421 3581 3473 7055 DOHH2_400M_050219_1,7056 DOHH2_400M_050219_1,7056,EDRCRACLPQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7057 39.218 96.0 491100.0 25 0 76405.0 42713 VVAGTRQR 8 69 443.7646912314235 885.514829529647 2 443.7643615603447 MULTI CID FTMS 0 0 0 7055 464033.21875 0.7671137077869693 3 -0.2867584228515625 2 Unmodified _VVAGTRQR_ chr2:224703887-224709973|30|11.5|0.03|8.74|-|2|CCDC195,CCDC195|1 2.577480529830294 0.808687252328423 1 R 1 7 12.474 0.0 0.0 1.4087 0.0 0.0 711.4026144190987 0.0 711.4026144190987 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 1.4087 + + 3 + 1 2.178 41332.5 1.0 3582 3473 7055 DOHH2_400M_050219_1,7057 DOHH2_400M_050219_1,7057,VVAGTRQR False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 7058 39.222 176.0 465890.0 25 0 42909.0 + 18010 KSDVHLNFY 9 106 374.8572522756956 1121.5499274272868 3 374.8570739626884 MULTI CID FTMS 0 0 0 7055 205872.15625 1.0 0 0.0 3 Unmodified _KSDVHLNFY_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 13.90604991867851 0.4602628045680013 1 N{I|L}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y 6 8 28.377 0.0 0.0 2.5302 0.0 0.0 328.1413613633443 0.0 328.1413613633443 0.0 17.58024070117017 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.4247425010840047 N{I|L}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y 2.5302 - 61 + 1 2.178 68129.0 1.0 3583 3473 7055 DOHH2_400M_050219_1,7058 DOHH2_400M_050219_1,7058,KSDVHLNFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7059 39.228 323.0 171050.0 25 0 12467.0 + 198 AAPPLKSCL 9 113 450.2554033044344 898.4962536756688 2 450.2564575076103 MULTI CID FTMS 0 0 0 7055 117623.0 0.4554458620363991 -7 0.7176971435546875 4 Unmodified _AAPPLKSCL_ REV__ENST00000334512.9_1_10:81073638-81074007:+|nuORF 4.3292370932331545 0.7635526921153418 1 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 1.3883 0.0 0.0 733.4169517731282 0.0 733.4169517731282 0.0 1.2371250542002343 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3883 - 17 + 1 2.178 46872.6 1.0 3584 3473 7055 DOHH2_400M_050219_1,7059 DOHH2_400M_050219_1,7059,AAPPLKSCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7060 39.241 800.0 42564.0 25 0 3460.9 -1 0 56 988.452839531938 2962.336689196014 3 989.1227905154228 MULTI CID FTMS 0 0 0 7055 100679.9609375 0.9181159886469392 -1 0.0756568908691406 5 1 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.15542 0.0 0.0 2133.972139490739 678.2967012994749 2812.268840790214 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.15542 - 21 + 1 2.178 35419.5 0.550000011920929 3585 3473 7055 DOHH2_400M_050219_1,7060 DOHH2_400M_050219_1,7060, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7061 39.252 628.0 180200.0 25 0 12136.0 + + 40393 VLDIPSKY 8 132 467.7660051699141 933.5174574066284 2 467.7660705447197 MULTI CID FTMS 0 0 0 7055 103972.0390625 1.0 0 0.0 6 Unmodified _VIDLNFTL_ ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A;ENST00000540838.1_1_12:395328-402065:-|nuORF 30.63653989081413 0.3996269429323407 1 [{I|L}V]D{I|L}PSKY 8 -1 + 57.847 0.0 0.0 6.1966 6.1966 90.875 0.0 0.0 0.0 45.150681031708615 6.727128086863132 6.727128086863132 12.92087028326936 0 0.8494850021680094 2.0 0.2614393726401688 0.0 [{I|L}V]D{I|L}PSKY;[{I|L}V]D{I|L}Y[KS]P;[{I|L}V]D{I|L}Y[QA]{I|L} 6.1966;4.8125;4.4841 -;-;- 266 + 1 2.178 91628.8 1.0 3586 3473 7055 DOHH2_400M_050219_1,7061 DOHH2_400M_050219_1,7061,VIDLNFTL False False VLDIPSKY 39.252324 467.76607054472 527695.8125 7055.0 ENSG00000073614|ENST00000399788|KDM5A;;nc|ENSG00000073614|P29375-2|KDM5A;;ENST00000540838.1_1_12:395328-402065:-|nuORF 5.177061875661214 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7062 39.263 631.0 189870.0 25 0 12189.0 + 5459 DLRDRFTEM 9 164 394.8574387769313 1181.550486930994 3 394.8572875857353 MULTI CID FTMS 0 0 0 7055 93293.4921875 1.0 0 0.0 7 Unmodified _DLRDRFTEM_ ENSG00000071243|ENST00000315870|ING3;nc|ENSG00000071243|Q9NXR8-2|ING3;nc|ENSG00000071243|Q9NXR8-3|ING3 13.042465956692816 0.4836390050082244 1 EDM 3 7 25.177 0.0 0.0 2.1309 0.0 0.0 788.4313042714437 0.0 788.4313042714437 0.0 12.078343878162343 0.0 0.0 0 0.5 0.0 0.0 0.0 EDM 2.1309 - 105 1 2.178 96456.3 1.0 3587 3473 7055 DOHH2_400M_050219_1,7062 DOHH2_400M_050219_1,7062,DLRDRFTEM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7063 39.277 800.0 251020.0 25 0 19858.0 + 31666 RRHLLVLLL 9 237 378.2611913272251 0 378.2603027224541 PEAK CID FTMS 0 0 0 7055 92947.828125 1.0 0 0.0 8 Unmodified _RRHLLVLLL_ ENSG00000104901|ENST00000221498|DKKL1 1.1933415558491238 0.3444685223463735 1 {I|L} 1 8 10.969 0.0 0.0 1.4538 0.0 0.0 131.09595903939424 507.3044527643188 638.400411803713 0.0 0.0 0.0 0.0 0 0.5484550065040282 0.0 0.0 0.0 + {I|L} 1.4538 + + 13 + 1 2.178 158074.9 0.9100000262260436 3588 3473 7055 DOHH2_400M_050219_1,7063 DOHH2_400M_050219_1,7063,RRHLLVLLL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7064 39.28 51.0 894750.0 25 0 91841.0 -1 0 75 479.27838575818873 478.2711092915888 1 479.2804748415947 MULTI CID FTMS 0 0 0 7055 556161.25 0.9267980381658012 -4 0.4241409301757812 9 1 M 1 -1 11.109 0.0 0.0 2.3228 0.0 0.0 329.21986830213405 0.0 329.21986830213405 0.0 1.1944104445756842 0.0 0.0 0 0.0 0.0 0.0 0.0 M 2.3228 - 11 + 1 2.178 41592.5 1.0 3589 3473 7055 DOHH2_400M_050219_1,7064 DOHH2_400M_050219_1,7064, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7066 39.285 26.0 1312800.0 25 0 140670.0 -1 0 48 603.967411717614 1808.880405753042 3 603.9686767458916 MULTI CID FTMS 0 0 0 7065 1245770.375 0.6143025364004975 -1 0.0801506042480468 1 1 {I|L}Q 2 -1 27.831 0.0 0.0 1.5386 0.0 0.0 1549.7271902762825 0.0 1549.7271902762825 0.0 1.888793896675267 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 {I|L}Q 1.5386 - 22 + 1 2.187 34789.1 1.0 3590 3474 7065 DOHH2_400M_050219_1,7066 DOHH2_400M_050219_1,7066, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7067 39.288 173.0 235580.0 25 0 14176.0 + 28996 QDWLNGKEY 9 89 576.7693662139445 1151.524179494689 2 576.7696411013603 MULTI CID FTMS 0 0 0 7065 106798.8203125 0.1279251752982801 2 -0.2066078186035156 2 Unmodified _QDWLNGKEY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 20.41453444215458 0.284085796332423 1 CN{I|L}T[Y{M(Oxidation (M))|F}] 6 7 18.365 0.0 0.0 1.5948 0.0 0.0 392.2287770001969 0.0 392.2287770001969 0.0 4.385475209128064 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 CN{I|L}T[Y{M(Oxidation (M))|F}] 1.5948 - 118 1 2.187 36073.7 1.0 3591 3474 7065 DOHH2_400M_050219_1,7067 DOHH2_400M_050219_1,7067,QDWLNGKEY False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7068 39.291 138.0 337020.0 25 0 24696.0 -1 NCKEEIASI 9 85 532.2567215948411 1062.498890256482 2 532.2576171755791 MULTI CID FTMS 0 0 0 7065 221129.703125 1.0 0 0.0 3 Carbamidomethyl (C) _NC(Carbamidomethyl (C))KEEIASI_ ENSG00000029725|ENST00000537505|RABEP1;ENST00000575475.2_1_17:5185712-5281605:+|nuORF;nc|ENSG00000029725|Q15276-2|RABEP1 39.94969957227396 0.0757326808254658 1 {I|L}AS{I|L} 4 -1 43.175 0.0 0.0 4.0636 0.0 0.0 660.255206139781 0.0 660.255206139781 0.0 29.66358083057728 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 {I|L}AS{I|L} 4.0636 + + 67 1 2.187 41158.4 1.0 3592 3474 7065 DOHH2_400M_050219_1,7068 DOHH2_400M_050219_1,7068,NCKEEIASI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7069 39.297 333.0 236230.0 25 0 38672.0 + 35250 SSEQTFMYY 9 113 586.2340194687528 1170.4534860043054 2 586.2342407107353 MULTI CID FTMS 0 0 0 7065 207515.984375 0.4111092159995839 -1 0.0801506042480468 4 Oxidation (M) _SSEQTFM(Oxidation (M))YY_ ENSG00000115758|ENST00000234111|ODC1 49.93300154707207 0.0405168250806675 1 {M(Oxidation (M))|F}{M(Oxidation (M))|F}TSYY 6 6 47.256 0.0 0.0 4.0374 0.0 0.0 344.1486286818429 0.0 344.1486286818429 0.0 34.781381439366186 0.0 0.0 0 0.3807196863200844 0.0 1.2302046884880935 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F}TSYY 4.0374 - 543 + 1 2.187 62556.3 1.0 3593 3474 7065 DOHH2_400M_050219_1,7069 DOHH2_400M_050219_1,7069,SSEQTFMYY True False SSEQTFMYY 39.296974 586.234240710735 3350870.0 7065.0 ENSG00000115758|ENST00000234111|ODC1 6.376443862915039 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7070 39.302 271.0 237870.0 25 0 32605.0 + 34422 SLVSTLLEL 9 97 487.7904846398097 973.5664163464194 2 487.7904846072197 MULTI CID FTMS 0 0 0 7065 189167.78125 0.6778349392813148 -3 0.2651252746582031 5 Unmodified _SLVSTLLEL_ REV__ENSG00000065060|ENST00000192788|BLTP3A 7.910154910731844 0.6385446671287552 1 {I|L} 1 -1 12.218 0.0 0.0 1.255 0.0 0.0 842.4718251372382 0.0 842.4718251372382 0.0 12.03742663289134 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.255 + + 44 + 1 2.187 56691.9 1.0 3594 3474 7065 DOHH2_400M_050219_1,7070 DOHH2_400M_050219_1,7070,SLVSTLLEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7071 39.307 297.0 315230.0 25 0 36201.0 + 42177 VSDRVTVLY 9 117 526.292282178235 1050.57001142327 2 526.2933837771416 MULTI CID FTMS 0 0 0 7065 176794.328125 0.9541487601326536 -1 0.0801506042480468 6 Unmodified _VSDRVTVLY_ ENSG00000119723|ENST00000334571|COQ6;ENST00000556300.6_1_14:74417008-74425067:+|nuORF;ENST00000557584.5_1_14:74417012-74426158:+|nuORF;nc|ENSG00000119723|Q9Y2Z9-2|COQ6;nc|ENSG00000119723|Q9Y2Z9-3|COQ6 36.506200033944 0.094635877243972 1 {I|L}VTVY{I|L}Y 7 5 52.171 0.0 0.0 4.966 0.0 0.0 181.0738402871308 0.0 181.0738402871308 0.0 30.47966971817728 0.0 0.0 0 0.0 0.0 1.0189301784845295 0.0 {I|L}VTVY{I|L}Y 4.966 - 545 + 1 2.187 77048.3 1.0 3595 3474 7065 DOHH2_400M_050219_1,7071 DOHH2_400M_050219_1,7071,VSDRVTVLY True True VSDRVTVLY 39.307416 526.293383777142 1265129.375 7065.0 ENST00000557584.5_1_14:74417012-74426158:+|nuORF;;nc|ENSG00000119723|Q9Y2Z9-3|COQ6;;ENSG00000119723|ENST00000334571|COQ6;;nc|ENSG00000119723|Q9Y2Z9-2|COQ6;;ENST00000556300.6_1_14:74417008-74425067:+|nuORF 3.489794890085856 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7072 39.317 551.0 240370.0 25 0 26737.0 + 14210 IDLLMRGL 8 172 465.7773942085099 0 465.7752563357353 PEAK CID FTMS 0 0 0 7065 147545.25 0.2241247574308749 -6 0.5945625305175781 7 Unmodified _IDLLMRGL_ REV__ENSG00000072315|ENST00000262839|TRPC5;REV__ENSG00000133107|ENST00000379705|TRPC4;REV__nc|ENSG00000133107|Q9UBN4-2|TRPC4;REV__nc|ENSG00000133107|Q9UBN4-3|TRPC4;REV__nc|ENSG00000133107|Q9UBN4-4|TRPC4;REV__nc|ENSG00000133107|Q9UBN4-5|TRPC4;REV__nc|ENSG00000133107|Q9UBN4-6|TRPC4 10.183394434864962 0.5394990767616434 1 G 1 -1 5.0443 0.0 0.0 0.54267 0.0 0.0 464.28313817112297 405.2173250787719 869.5004632498949 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 G 0.54267 + + 20 + 1 2.187 102770.8 1.0 3596 3474 7065 DOHH2_400M_050219_1,7072 DOHH2_400M_050219_1,7072,IDLLMRGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7073 39.322 271.0 239980.0 25 0 21913.0 + 33385 SGNLRISSL 9 114 473.7693801723256 945.5242074114512 2 473.7690307497978 MULTI CID FTMS 0 0 0 7065 151060.15625 0.795086473574766 -1 0.0801506042480468 8 Unmodified _SGNLRISSL_ ENST00000552540.5_2_12:57107337-57108468:-|nuORF 55.23464941255904 0.0288927259679799 1 [SG]N{I|L}R{[TV]|[{I|L}S]}S{I|L} 9 0 + 56.983 0.0 0.0 6.0266 6.0266 81.622 0.0 0.0 0.0 15.21961134720094 46.52548776265903 15.21961134720094 3.1829554760228973 0 2.4247425010840047 1.0457574905606752 0.3494850021680094 0.2742275032520141 + + [SG]N{I|L}R{[TV]|[{I|L}S]}S{I|L};[SG]N{I|L}T[RV]S{I|L};[SG]GG{I|L}R{[TV]|[{I|L}S]}S{I|L};[SG]N{I|L}R{[WT]|[RM]}{I|L};[SG]GG{I|L}T[RV]S{I|L};{[QN]|[E{I|L}]|[KN]}ER{[TV]|[{I|L}S]}S{I|L};{[TV]|[{I|L}S]}[NG]R{[TV]|[{I|L}S]}S{I|L};[SG]GG{I|L}R{[WT]|[RM]}{I|L};{[QN]|[E{I|L}]|[KN]}ET[RV]S{I|L};{[TV]|[{I|L}S]}[NG]T[RV]S{I|L} 6.0266;5.69;5.0527;4.7614;4.7161;3.9178;3.8926;3.7818;3.5812;3.556 +;-;-;-;-;-;-;-;-;- + 317 1 2.187 56427.1 1.0 3597 3474 7065 DOHH2_400M_050219_1,7073 DOHH2_400M_050219_1,7073,SGNLRISSL True True SGNLRISSL 39.322084 473.769030749798 1138717.125 7065.0 ENST00000552540.5_2_12:57107337-57108468:-|nuORF 4.688192288080852 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7074 39.336 800.0 184200.0 25 0 22215.0 -1 LLNYMILI 8 177 504.7951264015222 1007.5756998698444 2 504.7950317263603 MULTI CID FTMS 0 0 0 7065 149208.75 1.0 0 0.0 9 Oxidation (M) _LLNYM(Oxidation (M))ILI_ ENST00000265085.9_1_5:173384987-173385074:+|nuORF 34.18733598223924 0.3315367612694167 1 K{I|L}{I|L}{I|L} 4 -1 38.914 0.0 0.0 3.8622 0.0 0.0 522.216112205275 0.0 522.216112205275 0.0 26.92471268044436 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.6505149978319906 K{I|L}{I|L}{I|L} 3.8622 - 339 1 2.187 110305.5 0.6399999856948853 3598 3474 7065 DOHH2_400M_050219_1,7074 DOHH2_400M_050219_1,7074,LLNYMILI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7075 39.342 345.0 361990.0 25 0 62978.0 + + 19363 YMIDPSGVSY 10 114 574.3151153565096 1146.6156777798192 2 574.3149291872978 MULTI CID FTMS 0 0 0 7065 131575.984375 0.7058559587835778 -1 0.0801506042480468 10 Unmodified _LEQGRFVWI_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 20.41453444215458 0.284085796332423 1 {I|L}E 2 -1 25.701 0.0 0.0 2.2415 0.0 0.0 0.0 901.462810659661 901.462810659661 1.479400086720375 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.0 {I|L}E 2.2415 + + 874 + 1 2.187 98582.4 1.0 3599 3474 7065 DOHH2_400M_050219_1,7075 DOHH2_400M_050219_1,7075,LEQGRFVWI False False YMIDPSGVSY 39.342142 574.314929187298 3089907.0 7065.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 3.963597297668457 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7076 39.356 800.0 170540.0 25 0 10009.0 + 29038 QEFLDRNSQF 10 141 642.3039312110825 1282.593309488965 2 642.3047973513603 MULTI CID FTMS 0 0 0 7065 113054.375 0.9632988834262676 -1 0.0801506042480468 11 Unmodified _QEFLDRNSQF_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 100.0907132914201 0.0086105052902417 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}H[HS]{I|L}{M(Oxidation (M))|F} 8 5 38.696 0.0 0.0 3.017 0.0 0.0 0.0 254.07799913645832 254.07799913645832 15.714562785677655 0.0 0.0 0.0 0 0.0 0.0 1.1989700043360187 1.9361818737241727 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}H[HS]{I|L}{M(Oxidation (M))|F} 3.017 - 1140 1 2.187 106401.2 0.6299999952316284 3600 3474 7065 DOHH2_400M_050219_1,7076 DOHH2_400M_050219_1,7076,QEFLDRNSQF True True QEFLDRNSQF 39.355994 642.30479735136 991686.0625 7065.0 nc|ENSG00000113569|O75694-2|NUP155;;ENSG00000113569|ENST00000231498|NUP155 6.652381579081218 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7077 39.365 399.0 257260.0 25 0 15190.0 + 829 AETDPGMVHL 10 131 535.2521726106006 1068.4897922880011 2 535.2523681521416 MULTI CID FTMS 0 0 0 7065 111350.609375 1.0 0 0.0 12 Unmodified _AETDPGMVHL_ ENSG00000111596|ENST00000229195|CNOT2;ENST00000548939.1_1_12:70732225-70736007:+|nuORF;nc|ENSG00000111596|Q9NZN8-2|CNOT2;nc|ENSG00000111596|Q9NZN8-3|CNOT2;nc|ENSG00000111596|Q9NZN8-4|CNOT2;nc|ENSG00000111596|Q9NZN8-5|CNOT2 39.957323273325 0.1580177220464651 1 {[CP]|[EA]}TDP{[MG]|[TS]}VH{I|L} 10 0 + 32.176 0.0 0.0 3.0113 3.0113 70.672 0.0 0.0 0.0 7.269987279362624 2.5325721386797966 2.5325721386797966 2.5325721386797966 0 0.6861818737241735 0.0 0.3252574989159953 0.0 + + {[CP]|[EA]}TDP{[MG]|[TS]}VH{I|L};{[CP]|[EA]}TDP{[MG]|[TS]}V{I|L}H;{[CP]|[EA]}TDP{[WT]|[RM]}H{I|L};{[CP]|[EA]}TDP[HT]{I|L}W;{[CP]|[EA]}TDP{[WT]|[RM]}{I|L}H;{[CP]|[EA]}TDP[HT]W{I|L};{[CP]|[EA]}R[QA]PD[WP];{[CP]|[EA]}T[{M(Oxidation (M))|F}V]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}W;{[CP]|[EA]}TD{I|L}[YC(Carbamidomethyl (C))]VV;{[CP]|[EA]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}W 3.0113;2.7743;2.6817;2.6817;2.4447;1.9535;1.602;1.069;0.67997;0.57549 +;-;-;-;-;-;-;-;-;- + 491 + 1 2.187 81324.3 1.0 3601 3474 7065 DOHH2_400M_050219_1,7077 DOHH2_400M_050219_1,7077,AETDPGMVHL False True AETDPGMVHL 39.364607 535.252368152142 752149.5 7065.0 nc|ENSG00000111596|Q9NZN8-3|CNOT2;;nc|ENSG00000111596|Q9NZN8-4|CNOT2;;nc|ENSG00000111596|Q9NZN8-5|CNOT2;;ENSG00000111596|ENST00000229195|CNOT2;;ENST00000548939.1_1_12:70732225-70736007:+|nuORF;;nc|ENSG00000111596|Q9NZN8-2|CNOT2 7.210920492808024 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7078 39.378 800.0 197050.0 25 0 17358.0 35423 STKSTRTSARP 11 159 596.3239073062401 1190.6332616792802 2 596.3241454958916 MULTI CID FTMS 0 0 0 7065 114175.734375 0.819370327282921 -2 0.1558074951171875 13 Unmodified _STKSTRTSARP_ nc|ENSG00000167770|Q96FW1-2|OTUB1 9.38312468134398 0.8308777417566128 1 {M(Oxidation (M))|F}STNG{I|L}RP 8 7 36.948 0.0 0.0 3.1032 0.0 0.0 300.20570943854506 0.0 300.20570943854506 0.0 23.918531572705646 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 {M(Oxidation (M))|F}STNG{I|L}RP 3.1032 - 955 + 1 2.187 115328.8 0.5400000214576721 3602 3474 7065 DOHH2_400M_050219_1,7078 DOHH2_400M_050219_1,7078,STKSTRTSARP False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7080 39.384 55.0 1000400.0 25 0 84094.0 + 38575 TTDFPGNYSGY 11 84 611.2567360477443 1220.4989191622883 2 611.2562744021416 MULTI CID FTMS 0 0 0 7079 953979.625 0.6761028077381052 -2 0.1786880493164062 1 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 36.506200033944 0.2662161991516171 1 {[DS]|[MA]|[CV]|TT}D{M(Oxidation (M))|F}[HM]YSGY 10 3 {[DS]|[MA]|[CV]|TT}D{M(Oxidation (M))|F}[HM]Y + + 23.812 12.68 1.4162 1.951 1.951 48.851 0.0 0.0 0.0 0.0 4.30904958878866 0.0 0.0 0 0.0 0.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}D{M(Oxidation (M))|F}[HM]YSGY 1.951 - 156 + 1 2.191 45837.6 1.0 3603 3475 7079 DOHH2_400M_050219_1,7080 DOHH2_400M_050219_1,7080,TTDFPGNYSGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7081 39.39 315.0 176350.0 25 0 13408.0 + 431 AEEPLAGRTW 10 86 565.2855401940083 1128.5565274548164 2 565.2847778201103 MULTI CID FTMS 0 0 0 7079 90113.078125 0.0676377541594981 3 -0.3455047607421875 2 Unmodified _AEEPLAGRTW_ ENST00000529704.5_1_11:67119307-67120167:-|nuORF;ENST00000534515.1_1_11:67119307-67119526:-|nuORF 33.4449034751529 0.2267874087365337 1 {[CP]|[EA]}EP{I|L}A[WK]W 9 3 + 48.394 0.0 0.0 4.2882 4.2882 86.518 0.0 0.0 0.0 31.20297202896872 6.923487412610356 6.923487412610356 36.05265951879794 0 0.8807196863200843 0.0 0.4247425010840047 0.4247425010840047 {[CP]|[EA]}EP{I|L}A[WK]W;{[MS]|[{M(Oxidation (M))|F}A]}[HA]{I|L}A[WK]W;[{I|L}P]A{[{M(Oxidation (M))|F}H]|[RQ]}H[HA]{[CP]|[EA]};[{I|L}P]A[WP]{[MS]|[{M(Oxidation (M))|F}A]}Q{[CP]|[EA]} 4.2882;1.0936;0.98289;0.86194 -;-;-;- 79 + 1 2.191 50194.8 1.0 3604 3475 7079 DOHH2_400M_050219_1,7081 DOHH2_400M_050219_1,7081,AEEPLAGRTW False True AEEPLAGRTW 39.389503 565.28477782011 17429814.0 7079.0 ENST00000534515.1_1_11:67119307-67119526:-|nuORF;;ENST00000529704.5_1_11:67119307-67120167:-|nuORF 7.034952322642009 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7082 39.392 97.0 954070.0 25 0 147160.0 -1 0 62 905.4481549086664 1808.8817568841323 2 905.4459106326104 MULTI CID FTMS 0 0 0 7079 676157.1875 1.0 0 0.0 3 1 H{I|L}[NP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}ER 9 -1 52.101 0.0 0.0 2.8803 0.0 0.0 0.0 703.3123873346311 703.3123873346311 31.616225017174383 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.4247425010840047 H{I|L}[NP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}ER 2.8803 - 62 + 1 2.191 69125.9 1.0 3605 3475 7079 DOHH2_400M_050219_1,7082 DOHH2_400M_050219_1,7082, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7083 39.393 64.0 808890.0 25 0 141640.0 + 18388 KVSAPPMAL 9 88 457.2644018435216 912.5142507538432 2 457.2639343142509 MULTI CID FTMS 0 0 0 7079 631987.25 0.3822228612891603 -2 0.1786880493164062 4 Unmodified _KVSAPPMAL_ REV__ENSG00000183018|ENST00000329078|SPNS2;REV__ENST00000571668.5_1_17:4437040-4440234:+|nuORF;REV__ENST00000576635.6_1_17:4439512-4440234:+|nuORF 7.910154910731844 0.6385446671287552 1 W 1 -1 13.495 0.0 0.0 1.4789 0.0 0.0 708.4239167468104 0.0 708.4239167468104 0.0 1.712113404111033 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.4789 - 27 + 1 2.191 45322.5 1.0 3606 3475 7079 DOHH2_400M_050219_1,7083 DOHH2_400M_050219_1,7083,KVSAPPMAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7084 39.395 108.0 570850.0 25 0 148810.0 + 30499 REFPDRLVGY 10 55 626.3276433981918 1250.6407338631834 2 626.3269531130791 MULTI CID FTMS 0 0 0 7079 421129.1875 0.7598954020808161 2 -0.2309150695800781 5 Unmodified _REFPDRLVGY_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 19.986897341741983 0.5121812865880797 1 GY 2 8 17.959 0.0 0.0 1.436 0.0 0.0 1012.5458679957992 0.0 1012.5458679957992 0.0 -0.3860296321303593 -0.3860296321303593 0.0 0 0.0 0.0 0.0 0.0 + GY 1.436 + + 25 + 1 2.191 50690.7 1.0 3607 3475 7079 DOHH2_400M_050219_1,7084 DOHH2_400M_050219_1,7084,REFPDRLVGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7085 39.398 117.0 518320.0 25 0 50287.0 + 15734 IRLENEIQTY 10 77 639.8374652759007 1277.6603776186014 2 639.8372680544853 MULTI CID FTMS 0 0 0 7079 360557.46875 0.95101464408246 -1 0.0985374450683593 6 Unmodified _IRLENEIQTY_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 22.65808497894818 0.4596126414678359 1 NE{I|L}QTY 6 4 41.159 0.0 0.0 3.2214 0.0 0.0 511.3110829084 0.0 511.3110829084 0.0 12.78151250383644 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.3807196863200844 + NE{I|L}QTY 3.2214 + + 285 1 2.191 51923.8 1.0 3608 3475 7079 DOHH2_400M_050219_1,7085 DOHH2_400M_050219_1,7085,IRLENEIQTY False True IRLENEIQTY 39.39794 639.837268054485 2637694.5 7079.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 5.38442866007487 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 7086 39.401 131.0 593160.0 25 0 56325.0 + 31859 RTIATALEY 9 97 519.2870094949097 1036.5594660566194 2 519.2847167849541 MULTI CID FTMS 0 0 0 7079 311858.46875 1.0 0 0.0 7 Unmodified _RTIATALEY_ ENSG00000135441|ENST00000548925|BLOC1S1;ENST00000549147.1_1_12:56113198-56113390:+|nuORF;nc|ENSG00000135441|P78537-2|BLOC1S1 12.240655878213236 0.5053430591993562 1 A{I|L}EY 4 5 28.928 0.0 0.0 2.7908 0.0 0.0 542.3204212873062 0.0 542.3204212873062 0.0 11.938200260161125 0.0 0.0 0 0.0 0.0 0.0 0.0 + A{I|L}EY 2.7908 + + 44 1 2.191 63567.6 1.0 3609 3475 7079 DOHH2_400M_050219_1,7086 DOHH2_400M_050219_1,7086,RTIATALEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7087 39.405 214.0 411920.0 25 0 25408.0 + -1 NMFCTRLSRCF 11 82 746.33529827334 1490.6560436134798 2 746.3353759646416 MULTI CID FTMS 0 0 0 7079 236416.0625 0.4353174969885796 -1 0.0985374450683593 8 2 Carbamidomethyl (C) _NMFC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 5.296884461304476 0.8501568894076437 1 [MN]PN{I|L}NADQR[DG]{M(Oxidation (M))|F} 13 -1 + 83.79 0.0 0.0 5.621 5.621 81.181 0.0 0.0 0.0 47.44161800451207 1.7013053272348913 1.7013053272348913 4.105291359800575 0 0.7614393726401688 1.5228787452803376 0.3807196863200844 1.1989700043360187 [MN]PN{I|L}NADQR[DG]{M(Oxidation (M))|F};[MN]PN{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PN{I|L}NWQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PN{I|L}NAD[AG]R[DG]{M(Oxidation (M))|F};[MN]PGG{I|L}NADQR[DG]{M(Oxidation (M))|F};[MN]PN{I|L}NADQ[VG][DG]{M(Oxidation (M))|F};[MN]PN{I|L}GGADQR[DG]{M(Oxidation (M))|F};[MN]PN{I|L}NADV{[QG]|[NA]}[DG]{M(Oxidation (M))|F};[MN]PN{I|L}NWQ[VG][DG]{M(Oxidation (M))|F};[MN]PGG{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]} 5.621;5.3456;5.102;5.0124;5.0124;5.0124;5.0124;4.8104;4.767;4.737 -;-;-;-;-;-;-;-;-;- 1367 + 1 2.191 64321.7 1.0 3610 3475 7079 DOHH2_400M_050219_1,7087 DOHH2_400M_050219_1,7087,NMFCTRLSRCF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7088 39.419 800.0 265210.0 25 0 16153.0 + 9737 FMDPEMETRY 10 140 659.7752365611842 1317.5359201891683 2 660.2759887576103 MULTI CID FTMS 0 0 0 7079 167833.578125 0.6508660005520154 -1 0.0985374450683593 9 Unmodified _FMDPEMETRY_ ENSG00000138031|ENST00000679454|ADCY3;nc|ENSG00000138031|O60266-2|ADCY3 37.07464296494664 0.1884581770199685 1 {M(Oxidation (M))|F}MDPEMETRY 10 0 + 47.089 0.0 0.0 3.574 3.574 81.502 0.0 0.0 0.0 23.354368449853617 12.200466874819432 12.200466874819432 12.136153375280188 0 0.8182503180159344 0.0 0.3252574989159953 0.3494850021680094 + + {M(Oxidation (M))|F}MDPEMETRY;[YN]DP{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}ETRY;{M(Oxidation (M))|F}[MN]P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}ETRY;{[TV]|[{I|L}S]}HTEMEPDME;[YT][R{M(Oxidation (M))|F}]MEPDME;{M(Oxidation (M))|F}MDPEM[{M(Oxidation (M))|F}V][R{M(Oxidation (M))|F}];[PS]H[{M(Oxidation (M))|F}V]MEPDME;{[TV]|[{I|L}S]}HTE{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PDMQ;[EP]{[MG]|[TS]}[YN]HPDMQ;[YT][RD]YEPDME 3.574;2.6529;2.3305;2.3172;2.238;2.0699;1.8342;1.6825;1.5656;1.5138 +;-;-;-;-;-;-;-;-;- + 1300 + 1 2.191 152167.5 0.7200000286102295 3611 3475 7079 DOHH2_400M_050219_1,7088 DOHH2_400M_050219_1,7088,FMDPEMETRY False True FMDPEMETRY 39.418517 659.775 2308184.75 7079.0 nc|ENSG00000138031|O60266-2|ADCY3;;ENSG00000138031|ENST00000679454|ADCY3 7.297512690226237 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7089 39.424 284.0 278660.0 25 0 22882.0 + 30501 REFPDRLVGY 10 80 417.8874124200154 1250.6404078602463 3 417.8867675662041 MULTI CID FTMS 0 0 0 7079 156948.921875 0.6839485937415631 3 -0.3455047607421875 10 Unmodified _REFPDRLVGY_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 27.289341220302404 0.3555555979980197 1 {[RE]|[WV]}{M(Oxidation (M))|F}PDR{I|L}VGY 10 0 + 63.109 0.0 0.0 5.0461 5.0461 81.465 0.0 0.0 0.0 5.764837301042718 52.140012553530966 5.764837301042718 6.773174902439578 0 2.1237125054200234 0.0 0.0 0.4247425010840047 + + {[RE]|[WV]}{M(Oxidation (M))|F}PDR{I|L}VGY;[YG]H{[WT]|[RM]}R{I|L}VGY;{[RE]|[WV]}{M(Oxidation (M))|F}PD[VG]{I|L}VGY;[YG]H{[WT]|[RM]}R{I|L}RY;{[RE]|[WV]}{M(Oxidation (M))|F}PD[VG]{I|L}RY;{[RE]|[WV]}TEER{I|L}RY;[YG]H{[WT]|[RM]}[VG]{I|L}RY;{[RE]|[WV]}VV[WM]{I|L}VGY;[HT]V{I|L}R[HC]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};{[RE]|[WV]}{M(Oxidation (M))|F}PD[K{I|L}]V[{M(Oxidation (M))|F}T] 5.0461;4.5046;4.3134;3.964;3.7693;3.4051;3.2277;2.6881;1.7263;1.5907 +;-;-;-;-;-;-;-;-;- + 177 1 2.191 68607.9 1.0 3612 3475 7079 DOHH2_400M_050219_1,7089 DOHH2_400M_050219_1,7089,REFPDRLVGY False True REFPDRLVGY 39.423729 417.886767566204 18428839.0 7079.0 nc|ENSG00000151348|Q93063-3|EXT2;;ENSG00000151348|ENST00000533608|EXT2;;nc|ENSG00000151348|Q93063-2|EXT2;;ENST00000528159.1_1_11:44228449-44265767:+|nuORF 10.318580627441406 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7090 39.428 219.0 290410.0 25 0 28454.0 + 23080 DIRPKISL 8 98 471.2928217274052 940.5710905216104 2 471.2922851443291 MULTI CID FTMS 0 0 0 7079 144640.484375 0.3432367318314057 3 -0.3455047607421875 11 Unmodified _LSLRPGVSL_ ENSG00000198919|ENST00000361582|DZIP3;ENST00000495008.5_1_3:108355483-108366962:+|nuORF 26.88365393820708 0.1891292719743517 1 [{I|L}P]AATR{I|L}{[TV]|[{I|L}S]} 9 6 + 26.373 0.0 0.0 2.8039 2.8039 78.883 0.0 0.0 0.0 7.107179976042207 4.144068328487126 4.144068328487126 9.417851562068158 0 0.5 1.6989700043360187 0.0 0.0 [{I|L}P]AATR{I|L}{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}R[KP]{I|L}{[TV]|[{I|L}S]};[{I|L}P][RK]D{I|L}{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}[KP]R{I|L}{[TV]|[{I|L}S]};[R{I|L}]D[KP]{I|L}{[TV]|[{I|L}S]};[KP]{NN|[MP]|[D{I|L}]|[EV]}R{I|L}{[TV]|[{I|L}S]};[R{I|L}][KP]D{I|L}{[TV]|[{I|L}S]} 2.8039;1.8026;1.7951;1.431;0.78344;0.22465;0.091822 -;-;-;-;-;-;- 174 1 2.191 52636.1 1.0 3613 3475 7079 DOHH2_400M_050219_1,7090 DOHH2_400M_050219_1,7090,LSLRPGVSL False False DIRPKISL 39.427861 471.292285144329 3605417.5 7079.0 ENSG00000198919|ENST00000361582|DZIP3;;ENST00000495008.5_1_3:108355483-108366962:+|nuORF 2.317243814468384 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7091 39.442 800.0 192550.0 25 0 8448.6 -1 EAGTRCQVAGW 11 172 617.7827889004874 1233.551024867775 2 617.7830688357353 MULTI CID FTMS 0 0 0 7079 134949.203125 1.0 0 0.0 12 Carbamidomethyl (C) _EAGTRC(Carbamidomethyl (C))QVAGW_ ENSG00000172232|ENST00000233997|AZU1 24.99096001346401 0.505407273373304 1 {[CP]|[EA]}SSS[H{I|L}]N{M(Oxidation (M))|F}GW 11 -1 + 55.912 0.0 0.0 4.5326 4.5326 85.983 0.0 0.0 0.0 41.30779236507827 13.08092317009784 13.08092317009784 18.62008921061556 0 1.7786596949921218 0.0 0.2887254899964357 0.899649864804614 {[CP]|[EA]}SSS[H{I|L}]N{M(Oxidation (M))|F}GW;{[CP]|[EA]}SSW[KA]NVDQ;{[CP]|[EA]}SSW[KA]N{[MG]|[TS]}[PG];[TA]D[KT]AEQQGW;{[CP]|[EA]}S[KT]AEQQGW;{[CP]|[EA]}SSW[WQ]{[NV]|[RG]}Q;[TA]D[KT]AEAGQGW;{[CP]|[EA]}SSSQQ[KT]D[PG];{[CP]|[EA]}S[KT]AEAGQGW;{[CP]|[EA]}SSW[KA]N[DN]{I|L} 4.5326;3.0231;3.0226;2.9802;2.8939;2.8878;2.7841;2.7036;2.6977;2.5316 -;-;-;-;-;-;-;-;-;- 3920 + 1 2.191 116482.3 0.6700000166893005 3614 3475 7079 DOHH2_400M_050219_1,7091 DOHH2_400M_050219_1,7091,EAGTRCQVAGW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7092 39.451 428.0 166040.0 25 0 25896.0 -1 MMKSMTVPF 9 134 544.2524154245579 1086.4902779159156 2 544.2532836794853 MULTI CID FTMS 0 0 0 7079 139782.171875 1.0 0 0.0 13 Oxidation (M) _MMKSM(Oxidation (M))TVPF_ ENST00000512561.5_1_5:68651732-68651771:-|nuORF 15.847184025352805 0.4077185912009129 1 {[CT]|[{M(Oxidation (M))|F}G]}{[ET]|[MV]}[YQ]V{I|L}M 9 -1 {[CT]|[{M(Oxidation (M))|F}G]}{[ET]|[MV]}[YQ]V + + 15.969 -6.3683 -0.77251 1.4698 1.4698 48.522 0.0 0.0 0.0 0.0 1.989700043360188 0.0 0.0 0 0.5 0.0 0.0 0.0 {[CT]|[{M(Oxidation (M))|F}G]}{[ET]|[MV]}[YQ]V{I|L}M 1.4698 - 344 + 1 2.191 61182.9 1.0 3615 3475 7079 DOHH2_400M_050219_1,7092 DOHH2_400M_050219_1,7092,MMKSMTVPF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7093 39.453 122.0 329860.0 25 0 24776.0 + 23383 LTDPIQGTEY 10 79 568.777370502516 1135.5401880718318 2 568.7770873904228 MULTI CID FTMS 0 0 0 7079 133881.65625 0.2277364894496376 -2 0.1786880493164062 14 Unmodified _LTDPIQGTEY_ ENSG00000172175|ENST00000649217|MALT1;nc|ENSG00000172175|Q9UDY8-2|MALT1 39.94969957227396 0.1580982266129622 1 [{I|L}T]DP{I|L}Q{[SA]|[TG]}[YE] 10 0 + 41.08 0.0 0.0 3.6177 3.6177 77.977 0.0 0.0 0.0 13.010299956639807 24.08030623340529 13.010299956639807 8.52182518111362 0 0.0 1.2218487496163564 1.1237125054200234 0.0 + + [{I|L}T]DP{I|L}Q{[SA]|[TG]}[YE];[{I|L}T]DP{I|L}[HM][Y{M(Oxidation (M))|F}];[{I|L}T]DP{I|L}[AG]{[SA]|[TG]}[YE];[{I|L}T]DPAAV{[SA]|[TG]}[YE];{[ET]|[MV]}VP{I|L}Q{[SA]|[TG]}[YE];[{I|L}P]{[ES]|[DT]|[{I|L}C]}{I|L}Q{[SA]|[TG]}[YE];[{I|L}T]DPAAG{[TV]|[{I|L}S]}[YE];[{I|L}T]DPAA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YE];[{I|L}T]DP[QA]{[TV]|[{I|L}S]}[YE];[{I|L}P]Q{[ET]|[MV]}V{[SA]|[TG]}[YE] 3.6177;2.8672;2.8106;2.5455;2.1699;2.1535;2.1253;1.9664;1.8114;1.6233 +;-;-;-;-;-;-;-;-;- + 291 1 2.191 36464.3 1.0 3616 3475 7079 DOHH2_400M_050219_1,7093 DOHH2_400M_050219_1,7093,LTDPIQGTEY False True LTDPIQGTEY 39.453033 568.777087390423 9448723.0 7079.0 ENSG00000172175|ENST00000649217|MALT1;;nc|ENSG00000172175|Q9UDY8-2|MALT1 6.72123368581136 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7094 39.467 800.0 148960.0 25 0 7679.1 -1 0 130 964.4453572749215 2890.3142424249645 3 964.7816650271416 MULTI CID FTMS 0 0 0 7079 78215.984375 0.1034024406648132 -3 0.2543449401855469 15 1 [DP]KS{[ES]|[DT]|[{I|L}C]}VG[HS]HP 12 -1 23.5 0.0 0.0 0.81306 0.0 0.0 0.0 1629.701058181077 1629.701058181077 0.4845941624602901 0.0 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.0 [DP]KS{[ES]|[DT]|[{I|L}C]}VG[HS]HP 0.81306 - 4875 1 2.191 89006.5 0.4199999868869781 3617 3475 7079 DOHH2_400M_050219_1,7094 DOHH2_400M_050219_1,7094, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7095 39.473 318.0 178800.0 25 0 21195.0 -1 QMCTVDLGE 9 97 534.7224355551797 0 534.7222167849541 PEAK CID FTMS 0 0 0 7079 153163.78125 1.0 0 0.0 16 Carbamidomethyl (C),Oxidation (M) _QM(Oxidation (M))C(Carbamidomethyl (C))TVDLGE_ ENSG00000117543|ENST00000370109|DPH5;nc|ENSG00000117543|Q9H2P9-2|DPH5;nc|ENSG00000117543|Q9H2P9-3|DPH5;nc|ENSG00000117543|Q9H2P9-4|DPH5;nc|ENSG00000117543|Q9H2P9-5|DPH5;nc|ENSG00000117543|Q9H2P9-6|DPH5 15.847184025352805 0.2451986057151378 1 {I|L}EG 3 -1 25.049 0.0 0.0 2.3467 0.0 0.0 204.09488224141552 561.1701143854124 765.264996626828 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.7302046884880937 0.0 {I|L}EG 2.3467 - 29 + 1 2.191 51468.5 1.0 3618 3475 7079 DOHH2_400M_050219_1,7095 DOHH2_400M_050219_1,7095,QMCTVDLGE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7096 39.487 800.0 153320.0 25 0 7378.9 + 4373 DAVEDLESVGK 11 147 581.2839739256418 1160.5533949180835 2 581.2842895388603 MULTI CID FTMS 0 0 0 7079 91745.5234375 0.9104165762200984 -1 0.0985374450683593 17 Unmodified _DAVEDLESVGK_ ENSG00000161634|ENST00000293371|DCD;nc|ENSG00000161634|P81605-2|DCD 36.39500950444726 0.267929034476522 1 {[DA]|[EG]}VED{I|L}ESVGK 11 0 + 87.166 0.0 0.0 7.5107 7.5107 96.088 0.0 0.0 0.0 53.00260550560952 10.447502398373572 10.447502398373572 25.914953902088087 0 1.0 1.6989700043360187 0.75 0.2735510299080328 + + {[DA]|[EG]}VED{I|L}ESVGK;{[DA]|[EG]}VED{I|L}WWK;{[DA]|[EG]}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[WT]|[RM]}{I|L}Y;{[DA]|[EG]}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[WT]|[RM]}Y{I|L};{[DA]|[EG]}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RP]{M(Oxidation (M))|F}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A[YN]ESVGK;{NN|[MP]|[D{I|L}]|[EV]}ESH[{I|L}T]A[{M(Oxidation (M))|F}E];{NN|[MP]|[D{I|L}]|[EV]}DTH[{I|L}T]A[{M(Oxidation (M))|F}E];{NN|[MP]|[D{I|L}]|[EV]}E[PA]E[{I|L}V][{M(Oxidation (M))|F}E];{NN|[MP]|[D{I|L}]|[EV]}E[PA][RN]A[{M(Oxidation (M))|F}E] 7.5107;5.2777;3.5165;2.9977;2.7626;2.2258;1.1276;1.1276;0.65233;0.65233 +;-;-;-;-;-;-;-;-;- + 741 + 1 2.191 95707.1 0.4900000095367431 3619 3475 7079 DOHH2_400M_050219_1,7096 DOHH2_400M_050219_1,7096,DAVEDLESVGK False True DAVEDLESVGK 39.486516 581.28428953886 529484.1875 7079.0 nc|ENSG00000161634|P81605-2|DCD;;ENSG00000161634|ENST00000293371|DCD 7.908442974090576 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7098 39.491 95.0 709860.0 25 0 122340.0 35308 SSRRGIPP 8 96 435.2515280440389 868.4885031548779 2 435.2504150271416 MULTI CID FTMS 0 0 0 7097 506991.65625 0.3559732209998167 7 -0.84130859375 1 Unmodified _SSRRGIPP_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A;REV__ENSG00000133401|ENST00000438447|PDZD2;REV__nc|ENSG00000133401|O15018-2|PDZD2 1.844237919475145 0.8131380230371302 1 Q 1 8 0.71334 0.0 0.0 0.082136 0.0 0.0 502.29637776600913 235.11928735904533 737.4156651250545 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.082136 - 6 + 1 2.191 56952.9 1.0 3620 3476 7097 DOHH2_400M_050219_1,7098 DOHH2_400M_050219_1,7098,SSRRGIPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7099 39.505 783.0 168260.0 25 0 12223.0 + 18009 KSDVHLNFY 9 142 561.782287135292 1121.550021337384 2 561.7822753787041 MULTI CID FTMS 0 0 0 7097 75731.6484375 0.060670251034423 3 -0.379364013671875 2 Unmodified _KSDVHLNFY_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 28.49450938151212 0.1686335738423394 1 K{[CP]|[EA]}KN{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y 9 6 + 37.853 0.0 0.0 3.3751 3.3751 68.251 0.0 0.0 0.0 3.711827458464264 3.711827458464264 3.711827458464264 0.1562067639286297 0 0.7742275032520141 0.0 0.0 0.4247425010840047 K{[CP]|[EA]}KN{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;K{[CP]|[EA]}N{I|L}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;WW[RH]K{M(Oxidation (M))|F}Y;K{[CP]|[EA]}NK{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;K{[CP]|[EA]}KS[H{I|L}]{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}HVSNK{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}HVNSK{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KT]DSK{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}HVSKN{M(Oxidation (M))|F}Y;K{[CP]|[EA]}K[YQ]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 3.3751;3.3612;3.0441;2.9497;2.8587;2.3998;2.3724;2.18;1.9744;1.9716 -;-;-;-;-;-;-;-;-;- 1328 + 1 2.191 104011.4 1.0 3621 3476 7097 DOHH2_400M_050219_1,7099 DOHH2_400M_050219_1,7099,KSDVHLNFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7100 39.507 69.0 1097900.0 25 0 92113.0 + 35534 STPDHSFSL 9 79 495.730052618741 989.4455523042822 2 495.7296630740166 MULTI CID FTMS 0 0 0 7097 1001140.375 0.4059611866718638 -1 0.1080703735351562 3 Unmodified _STPDHSFSL_ ENSG00000128272|ENST00000674920|ATF4 42.09456458481378 0.0639583784996157 1 [WY]S{M(Oxidation (M))|F}S{I|L}{[MG]|[TS]} 8 7 + 58.148 0.0 0.0 5.8769 5.8769 78.364 0.0 0.0 0.0 1.3033376849500655 5.484550065040281 1.3033376849500655 1.3033376849500655 0 0.0 1.3010299956639813 1.274227503252014 0.0 [WY]S{M(Oxidation (M))|F}S{I|L}{[MG]|[TS]};[HD]PS{M(Oxidation (M))|F}S{I|L}{[MG]|[TS]};{[MG]|[TS]}[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}S{I|L}{[MG]|[TS]};[HS]PD{M(Oxidation (M))|F}S{I|L}{[MG]|[TS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}S{I|L}{[MG]|[TS]};[YR]S{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}];[YR]S{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}C{I|L};[WY]S{[ES]|[DT]|[{I|L}C]}[YR];[HD]PS{[ES]|[DT]|[{I|L}C]}[YR];[WY]S[H{I|L}]P{[MG]|[TS]} 5.8769;5.7451;4.4817;4.028;3.6438;3.512;3.247;3.1329;2.9943;2.819 -;-;-;-;-;-;-;-;-;- 232 1 2.191 64306.4 1.0 3622 3476 7097 DOHH2_400M_050219_1,7100 DOHH2_400M_050219_1,7100,STPDHSFSL True True STPDHSFSL 39.506518 495.729663074017 13474300.0 7097.0 ENSG00000128272|ENST00000674920|ATF4 4.910296440124512 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7101 39.508 65.0 690110.0 25 0 140040.0 + -1 PPVVTDVV 8 61 434.2433033952613 866.4720538573225 2 434.2429077029228 MULTI CID FTMS 0 0 0 7097 697222.8125 0.734792331066757 -1 0.1080703735351562 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PPVVTDVV_ REV__ENST00000267339.6_1_13:111531406-111531613:-|nuORF 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.191 42028.1 1.0 3623 3476 7097 DOHH2_400M_050219_1,7101 DOHH2_400M_050219_1,7101,PPVVTDVV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7102 39.511 126.0 536780.0 25 0 82633.0 22932 LSELAIPAA 9 90 442.7576875709286 0 442.7563049197197 PEAK CID FTMS 0 0 0 7097 252972.140625 0.6694837675312251 -2 0.2066078186035156 5 Unmodified _LSELAIPAA_ ENSG00000204033|ENST00000372113|LRIT2;nc|ENSG00000204033|A6NDA9-2|LRIT2 4.75600775471527 0.3444685223463735 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.191 56550.1 1.0 3624 3476 7097 DOHH2_400M_050219_1,7102 DOHH2_400M_050219_1,7102,LSELAIPAA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7103 39.514 163.0 302490.0 25 0 31527.0 + 40399 VIDSAELQAY 10 90 554.7794875159055 1107.544422098611 2 554.7787963747978 MULTI CID FTMS 0 0 0 7097 200691.953125 0.3023534411643711 -1 0.1080703735351562 6 Unmodified _VIDSAELQAY_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 46.020951573049366 0.1035046897853725 1 [{I|L}V]DSAE{I|L} 7 3 36.788 0.0 0.0 3.3216 0.0 0.0 0.0 377.1441284797235 377.1441284797235 14.815578562017713 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.7614393726401688 0.0 + [{I|L}V]DSAE{I|L} 3.3216 + + 350 1 2.191 41825.5 1.0 3625 3476 7097 DOHH2_400M_050219_1,7103 DOHH2_400M_050219_1,7103,VIDSAELQAY True True VIDSAELQAY 39.513879 554.778796374798 3379243.75 7097.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 6.874045689900716 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7104 39.517 175.0 215750.0 25 0 20613.0 34223 SLPLKMNP 8 78 450.2554033044344 898.4962536756688 2 450.2561218142509 MULTI CID FTMS 0 0 0 7097 204724.3125 0.792709257427303 -4 0.3624153137207031 7 Unmodified _SLPLKMNP_ ENSG00000135315|ENST00000403245|CEP162;ENST00000497936.5_1_6:84884653-84936120:-|nuORF;nc|ENSG00000135315|Q5TB80-2|CEP162 2.302733041254933 0.8103549651115762 1 N 1 7 6.9897 0.0 0.0 0.77793 0.0 0.0 449.2528612569407 332.1878450983032 781.440706355244 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + N 0.77793 + + 20 + 1 2.191 34173.7 1.0 3626 3476 7097 DOHH2_400M_050219_1,7104 DOHH2_400M_050219_1,7104,SLPLKMNP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7105 39.523 292.0 239450.0 25 0 16210.0 -1 YMIDPSGVSY 10 108 574.2519228208716 1146.4892927085432 2 574.2518188357353 MULTI CID FTMS 0 0 0 7097 199085.375 1.0 0 0.0 8 Oxidation (M) _YM(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 19.256988751693697 0.5244284437930726 1 {[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}[C(Carbamidomethyl (C))K]YSY 9 -1 {[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}[C(Carbamidomethyl (C))K]Y + + 28.469 -1.5937 -0.18144 2.4832 2.4832 49.477 0.0 0.0 0.0 0.0 8.67754979854481 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 {[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}[C(Carbamidomethyl (C))K]YSY 2.4832 - 399 + 1 2.191 60413.5 1.0 3627 3476 7097 DOHH2_400M_050219_1,7105 DOHH2_400M_050219_1,7105,YMIDPSGVSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7106 39.536 800.0 383510.0 25 0 20337.0 + + 30741 ALEEQLQQIRAE 12 167 714.3780188198974 0 714.3760864138603 PEAK CID FTMS 0 0 0 7097 182266.8125 0.2387750072461039 -1 0.1080703735351562 9 Unmodified _RGRYNPLEYFI_ ENSG00000186395|ENST00000269576|KRT10;P13645;P02535-1 36.12702656103203 0.1673783412141896 1 EEQ{I|L}QQ{I|L}R 8 -1 108.57 0.0 0.0 7.6096 0.0 0.0 184.12363544281408 215.06716333560783 399.19079877842194 0.0 0.0 0.0 0.0 0 3.628144697160131 0.0 0.805462187404089 2.234636880228201 EEQ{I|L}QQ{I|L}R 7.6096 - 58148 + 1 2.191 215181.3 0.7599999904632568 3628 3476 7097 DOHH2_400M_050219_1,7106 DOHH2_400M_050219_1,7106,RGRYNPLEYFI False False ALEEQLQQIRAE 39.536489 714.37608641386 3925437.0 7097.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 8.911149660746256 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7107 39.546 525.0 381990.0 25 0 77887.0 + 45229 YRMDGHIQL 9 166 378.190470774709 0 378.1899291872978 PEAK CID FTMS 0 0 0 7097 143933.4375 0.6873506451294699 -1 0.1080703735351562 10 Unmodified _YRMDGHIQL_ ENSG00000125124|ENST00000245157|BBS2;ENST00000561951.5_1_16:56535647-56545169:-|nuORF;ENST00000565781.5_1_16:56536573-56553907:-|nuORF;ENST00000569342.5_1_16:56536573-56553774:-|nuORF 16.149105407346934 0.2417352846137613 1 E 1 9 7.4608 0.0 0.0 0.98901 0.0 0.0 377.1500700027928 245.15398584537343 622.3040558481662 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.25 0.0 E 0.98901 - 27 + 1 2.191 160006.5 1.0 3629 3476 7097 DOHH2_400M_050219_1,7107 DOHH2_400M_050219_1,7107,YRMDGHIQL False True YRMDGHIQL 39.545718 378.189929187298 1979465.75 7097.0 ENSG00000125124|ENST00000245157|BBS2;;ENST00000561951.5_1_16:56535647-56545169:-|nuORF;;ENST00000569342.5_1_16:56536573-56553774:-|nuORF;;ENST00000565781.5_1_16:56536573-56553907:-|nuORF 4.902315855026245 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7108 39.56 800.0 310870.0 25 0 19715.0 + 33076 SERDPYLVSY 10 134 614.7965669155396 1227.5785808978792 2 614.7958251833916 MULTI CID FTMS 0 0 0 7097 142013.875 0.611652771566847 -1 0.1080703735351562 11 Unmodified _SERDPYLVSY_ ENSG00000105483|ENST00000651546|CARD8;ENST00000522051.5_1_19:48714969-48735770:-|nuORF;ENST00000522773.5_1_19:48714969-48736545:-|nuORF;nc|ENSG00000105483|Q9Y2G2-1|CARD8;nc|ENSG00000105483|Q9Y2G2-4|CARD8;nc|ENSG00000105483|Q9Y2G2-7|CARD8 61.08992128646608 0.0337271188422265 1 [VS]WDPY{I|L}VSY 10 2 + 65.626 0.0 0.0 5.346 5.346 81.535 0.0 0.0 0.0 5.818566052396747 15.026975159433531 5.818566052396747 5.818566052396747 0 1.3494850021680094 0.958607314841775 0.6382104921644451 0.0 [VS]WDPY{I|L}VSY;[{I|L}V]C(Carbamidomethyl (C))DPY{I|L}VSY;[VS]WDPYV{I|L}SY;[VS]WQ[C(Carbamidomethyl (C))S]{I|L}VSY;[VS]WE[{M(Oxidation (M))|F}V]{I|L}VSY;[VS]WDPY{I|L}SVY;[VS]WDPY{I|L}WY;{[ES]|[DT]|[{I|L}C]}RDPY{I|L}VSY;[{I|L}V]C(Carbamidomethyl (C))DPYV{I|L}SY;[{I|L}V]C(Carbamidomethyl (C))Q[C(Carbamidomethyl (C))S]{I|L}VSY 5.346;4.872;4.6726;4.6285;4.5715;4.4482;4.4066;4.3704;4.1986;4.1545 -;-;-;-;-;-;-;+;-;- + 2311 1 2.191 182743.8 0.6800000071525574 3630 3476 7097 DOHH2_400M_050219_1,7108 DOHH2_400M_050219_1,7108,SERDPYLVSY True True SERDPYLVSY 39.559556 614.795825183392 1510452.125 7097.0 nc|ENSG00000105483|Q9Y2G2-1|CARD8;;ENST00000522051.5_1_19:48714969-48735770:-|nuORF;;nc|ENSG00000105483|Q9Y2G2-7|CARD8;;ENSG00000105483|ENST00000651546|CARD8;;nc|ENSG00000105483|Q9Y2G2-4|CARD8;;ENST00000522773.5_1_19:48714969-48736545:-|nuORF 6.817211786905925 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7109 39.573 800.0 183460.0 25 0 28978.0 + 30323 RAEDAMRLYY 10 124 644.3099621376485 1286.605371342097 2 644.3115722537041 MULTI CID FTMS 0 0 0 7097 117749.65625 1.0 0 0.0 12 Unmodified _RAEDAMRLYY_ ENSG00000105258|ENST00000221859|POLR2I;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;ENST00000589591.5_1_19:36604659-36605638:-|nuORF;ENST00000592962.5_1_19:36604659-36605276:-|nuORF 32.89776655970281 0.2325650513667944 1 YTP{I|L} 4 9 35.974 0.0 0.0 2.7961 0.0 0.0 0.0 809.3324068658811 809.3324068658811 4.705381485761585 0.0 0.0 0.0 0 0.3935078169319297 1.3979400086720375 0.4247425010840047 0.0 YTP{I|L} 2.7961 - 275 + 1 2.191 109194.8 0.6299999952316284 3631 3476 7097 DOHH2_400M_050219_1,7109 DOHH2_400M_050219_1,7109,RAEDAMRLYY False True RAEDAMRLYY 39.573387 644.311572253704 684890.6875 7097.0 ENST00000592962.5_1_19:36604659-36605276:-|nuORF;;ENSG00000105258|ENST00000221859|POLR2I;;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;;ENST00000589591.5_1_19:36604659-36605638:-|nuORF 6.684419631958008 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7110 39.582 381.0 179870.0 25 0 13262.0 + 7168 EEPPPDQVF 9 123 529.2459432545143 1056.4773335758284 2 529.2443725466728 MULTI CID FTMS 0 0 0 7097 114568.5390625 0.8209702389343088 3 -0.379364013671875 13 Unmodified _EEPPPDQVF_ ENSG00000140968|ENST00000268638|IRF8 18.1463463914782 0.3454829746528889 1 VQPQY 5 7 31.498 0.0 0.0 2.9814 0.0 0.0 423.16606756195966 0.0 423.16606756195966 0.0 17.518119729937993 0.0 0.0 0 0.0 0.0 0.0 0.5 VQPQY 2.9814 - 431 + 1 2.191 56453.2 1.0 3632 3476 7097 DOHH2_400M_050219_1,7110 DOHH2_400M_050219_1,7110,EEPPPDQVF False True EEPPPDQVF 39.581706 529.244372546673 757330.625 7097.0 ENSG00000140968|ENST00000268638|IRF8 0.6764052311579386 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7111 39.588 377.0 264860.0 25 0 12987.0 39877 VFLGGGAV 8 151 360.2065060217567 718.3984591103134 2 360.2036010622978 MULTI CID FTMS 0 0 0 7097 134417.609375 0.0346192505270277 7 -0.84130859375 14 Unmodified _VFLGGGAV_ ENSG00000181004|ENST00000314218|BBS12 0.7936320650641473 0.8195151834710337 1 P 1 8 9.6041 0.0 0.0 1.3369 0.0 0.0 603.33482798414 0.0 603.33482798414 0.0 1.2763625255165287 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.3369 - 28 + 1 2.191 83391.3 1.0 3633 3476 7097 DOHH2_400M_050219_1,7111 DOHH2_400M_050219_1,7111,VFLGGGAV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7112 39.592 202.0 518180.0 25 0 43000.0 + 37592 TLKIRAEVL 9 137 521.8339617019694 1041.6533704707388 2 521.8339111208916 MULTI CID FTMS 0 0 0 7097 105492.8359375 0.7579930927230416 -1 0.1080703735351562 15 Unmodified _TLKIRAEVL_ ENSG00000116191|ENST00000367635|RALGPS2;ENST00000495034.5_1_1:178745899-178848128:+|nuORF;nc|ENSG00000116191|Q86X27-2|RALGPS2;nc|ENSG00000116191|Q86X27-3|RALGPS2 31.26834338654808 0.1333407332142048 1 {NN|[MP]|[D{I|L}]|[EV]}KVK{I|L}{I|L}T{I|L} 9 6 + 39.043 0.0 0.0 3.7482 3.7482 81.354 0.0 0.0 0.0 4.004098889160588 3.778996435933316 3.778996435933316 9.676284089102452 0 0.3054621874040891 2.0 0.25 0.0 {NN|[MP]|[D{I|L}]|[EV]}KVK{I|L}{I|L}T{I|L};[{I|L}T][RV]QV{I|L}T{I|L};[{I|L}T][RV]T[Q{I|L}]V{I|L};[{I|L}T][RV]Q[{I|L}T]V{I|L};[{I|L}T][RV]TVAAV{I|L};[{I|L}T][RV][AG]V{I|L}T{I|L};[{I|L}T][RV]TV[Q{I|L}]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DK{I|L}{I|L}T{I|L};{[TV]|[{I|L}S]}[R{I|L}]QV{I|L}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EVK{I|L}{I|L}T{I|L} 3.7482;2.8192;2.3624;2.3624;2.1781;1.9352;1.7458;1.539;1.3903;1.3701 -;-;-;-;-;-;-;-;-;- 2880 1 2.191 88442.1 1.0 3634 3476 7097 DOHH2_400M_050219_1,7112 DOHH2_400M_050219_1,7112,TLKIRAEVL False True TLKIRAEVL 39.592326 521.833911120892 685386.3125 7097.0 nc|ENSG00000116191|Q86X27-2|RALGPS2;;ENSG00000116191|ENST00000367635|RALGPS2;;nc|ENSG00000116191|Q86X27-3|RALGPS2;;ENST00000495034.5_1_1:178745899-178848128:+|nuORF 0.5624199708302816 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7113 39.597 275.0 287020.0 25 0 100430.0 + 16233 IVNRLLPSA 9 113 491.8058428952296 981.5971328572592 2 491.8054687380791 MULTI CID FTMS 0 0 0 7097 142783.03125 0.0740493936517788 3 -0.379364013671875 16 Unmodified _IVNRLLPSA_ REV__ENSG00000222018|ENST00000410005|C21orf140 10.073929032068715 0.563993802247229 1 Y 1 -1 15.485 0.0 0.0 1.5775 0.0 0.0 800.5231562721013 0.0 800.5231562721013 0.0 0.0269751594335314 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5775 - 99 + 1 2.191 66341.1 1.0 3635 3476 7097 DOHH2_400M_050219_1,7113 DOHH2_400M_050219_1,7113,IVNRLLPSA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7114 39.609 687.0 211160.0 25 0 19886.0 + 21608 LPKQKKSL 8 161 471.3126042924781 940.6106556517562 2 471.3123046755791 MULTI CID FTMS 0 0 0 7097 94844.2578125 0.9588109954339832 2 -0.2374343872070312 17 Unmodified _LPKQKKSL_ REV__ENSG00000198554|ENST00000360586|WDHD1;REV__ENST00000475379.1_1_14:55408210-55411247:-|nuORF;REV__nc|ENSG00000198554|O75717-2|WDHD1 30.63653989081413 0.3996269429323407 1 {I|L}P 2 -1 45.217 0.0 0.0 4.8071 0.0 0.0 0.0 727.4498037451747 727.4498037451747 21.660006443871893 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P 4.8071 + + 218 + 1 2.191 111687.5 1.0 3636 3476 7097 DOHH2_400M_050219_1,7114 DOHH2_400M_050219_1,7114,LPKQKKSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7116 39.615 75.0 511340.0 25 0 59167.0 -1 0 48 603.967411717614 1808.880405753042 3 603.9675170779228 MULTI CID FTMS 0 0 0 7115 513101.96875 0.2530160029172421 2 -0.2565193176269531 1 1 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 6 -1 33.148 0.0 0.0 1.8325 0.0 0.0 1095.5005360334 0.0 1095.5005360334 0.0 10.929862658764264 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 1.8325 - 33 1 2.198 40675.9 1.0 3637 3477 7115 DOHH2_400M_050219_1,7116 DOHH2_400M_050219_1,7116, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7117 39.617 69.0 716380.0 25 0 122660.0 -1 0 79 479.27838575818873 478.2711092915888 1 479.2772399783134 MULTI CID FTMS 0 0 0 7115 600088.9375 1.0 0 0.0 2 1 V 1 -1 1.5938 0.0 0.0 0.33324 0.0 0.0 141.0630232093606 235.1189364068969 376.1819596162575 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.33324 - 3 + 1 2.198 45047.1 1.0 3638 3477 7115 DOHH2_400M_050219_1,7117 DOHH2_400M_050219_1,7117, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7118 39.618 20.0 3420300.0 25 0 686110.0 + 44113 YLDDPDLKY 9 61 571.2742747343118 1140.5339965354235 2 571.2743408083916 MULTI CID FTMS 0 0 0 7115 2682335.75 0.3348320350957915 -1 0.1228446960449218 3 Unmodified _YLDDPDLKY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 43.77239144664712 0.0547478964384323 1 Y{I|L}DD[DP]{I|L}KY 9 0 + 86.041 0.0 0.0 7.5439 7.5439 97.472 0.0 0.0 0.0 56.89748932436905 13.46787486224656 13.46787486224656 86.04068950097697 0 1.1549471895720984 2.0 0.0 0.2887254899964357 + + Y{I|L}DD[DP]{I|L}KY 7.5439 + + 98 + 1 2.198 56250.3 1.0 3639 3477 7115 DOHH2_400M_050219_1,7118 DOHH2_400M_050219_1,7118,YLDDPDLKY True True YLDDPDLKY 39.617814 571.274340808392 88179848.0 7115.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 9.293757438659668 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7119 39.619 63.0 1051500.0 25 0 157600.0 + 9509 FLDSTGSRLDY 11 52 637.3066754185747 1272.5987979039494 2 637.3066894412041 MULTI CID FTMS 0 0 0 7115 842736.3125 0.7461989665275296 -1 0.1228446960449218 4 Unmodified _FLDSTGSRLDY_ ENSG00000136261|ENST00000258761|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF;nc|ENSG00000136261|Q9Y6E2-2|BZW2 34.221707139014875 0.3014076866608453 1 GTSD{I|L}E 6 8 57.652 0.0 0.0 4.5302 0.0 0.0 652.3161488263687 0.0 652.3161488263687 0.0 36.68243764792422 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 GTSD{I|L}E 4.5302 - 87 1 2.198 54807.4 1.0 3640 3477 7115 DOHH2_400M_050219_1,7119 DOHH2_400M_050219_1,7119,FLDSTGSRLDY False True FLDSTGSRLDY 39.619361 637.306689441204 7180247.0 7115.0 nc|ENSG00000136261|Q9Y6E2-2|BZW2;;ENSG00000136261|ENST00000258761|BZW2;;ENST00000480517.5_1_7:16705068-16725727:+|nuORF 7.472596327463786 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7120 39.622 103.0 464110.0 25 0 85269.0 + 20477 LLLCLWGL 8 74 465.7773942085099 0 465.7775451540947 PEAK CID FTMS 0 0 0 7115 533400.9375 0.8102487591473719 -3 0.3294525146484375 5 Unmodified _LLLCLWGL_ REV__ENSG00000026103|ENST00000652046|FAS;REV__ENST00000371857.7_1_10:90770493-90770607:+|nuORF;REV__nc|ENSG00000026103|P25445-7|FAS 0.7936320650641473 0.5979579398327216 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.198 41799.5 1.0 3641 3477 7115 DOHH2_400M_050219_1,7120 DOHH2_400M_050219_1,7120,LLLCLWGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7121 39.624 129.0 521080.0 25 0 40520.0 + 42201 VSERDVYLTY 10 70 622.8116581490117 1243.6087633648233 2 622.8115112185478 MULTI CID FTMS 0 0 0 7115 406112.59375 0.236908094497789 -1 0.1228446960449218 6 Unmodified _VSERDVYLTY_ ENSG00000170638|ENST00000380909|TRABD;ENST00000463233.1_1_22:50624392-50636456:+|nuORF;ENST00000472677.1_1_22:50636123-50636456:+|nuORF;nc|ENSG00000170638|Q9H4I3-2|TRABD 27.22323531849824 0.3570408936368626 1 [YE]{[ET]|[MV]}VQV{I|L}TY 10 6 + 60.564 0.0 0.0 4.87 4.87 79.044 0.0 0.0 0.0 5.104765324935698 37.498774732166 5.104765324935698 4.771212547196626 0 1.3182503180159344 1.5228787452803376 0.4247425010840047 0.0 [YE]{[ET]|[MV]}VQV{I|L}TY;[YE]{[ET]|[MV]}VQ{I|L}VTY;[YT]{I|L}[PG][PG]Y{I|L}TY;[{I|L}T]Y[PG]{[MS]|[{M(Oxidation (M))|F}A]}V{I|L}TY;[{I|L}T]Y[PG][PG]Y{I|L}TY;[YT]{I|L}[PG]{[MS]|[{M(Oxidation (M))|F}A]}V{I|L}TY;[{I|L}T]Y[PG]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}VTY;[YT]{I|L}[PG]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}VTY;[{I|L}T][Q{I|L}]CVY{I|L}EY;[YT][KP][PA]Y{I|L}EY 4.87;4.4863;4.3162;4.3162;4.3162;4.3162;3.9325;3.9325;3.4002;2.9054 -;-;-;-;-;-;-;-;-;- 348 1 2.198 54844.9 1.0 3642 3477 7115 DOHH2_400M_050219_1,7121 DOHH2_400M_050219_1,7121,VSERDVYLTY False True VSERDVYLTY 39.624209 622.811511218548 21109116.0 7115.0 ENST00000472677.1_1_22:50636123-50636456:+|nuORF;;ENSG00000170638|ENST00000380909|TRABD;;nc|ENSG00000170638|Q9H4I3-2|TRABD;;ENST00000463233.1_1_22:50624392-50636456:+|nuORF 6.997842152913411 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7122 39.627 160.0 294660.0 25 0 38127.0 + 42136 VRSSGLRSL 9 86 487.7904846398097 973.5664163464194 2 487.7898437380791 MULTI CID FTMS 0 0 0 7115 279076.46875 1.0 0 0.0 7 Unmodified _VRSSGLRSL_ REV__ENSG00000104517|ENST00000520539|UBR5;REV__nc|ENSG00000104517|O95071-2|UBR5 10.073929032068715 0.563993802247229 1 [QT]{I|L}[SG][R{I|L}]S{I|L} 9 -1 + 13.138 0.0 0.0 1.3495 1.3495 70.441 0.0 0.0 0.0 1.8792095926292909 2.6806945519915377 1.8792095926292909 3.85350881364017 0 0.0 0.0 0.5 0.4247425010840047 [QT]{I|L}[SG][R{I|L}]S{I|L};[QT]{I|L}[SG][R{I|L}]TV;[QT][WK][{I|L}V]S{I|L} 1.3495;0.95369;0.24782 -;-;- 44 + 1 2.198 42056.3 1.0 3643 3477 7115 DOHH2_400M_050219_1,7122 DOHH2_400M_050219_1,7122,VRSSGLRSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7123 39.63 151.0 394840.0 25 0 35878.0 + 899 AEYDRPNLL 9 83 545.7815654992853 1089.5485780653703 2 545.7813598513603 MULTI CID FTMS 0 0 0 7115 281521.15625 1.0 0 0.0 8 Unmodified _AEYDRPNLL_ ENSG00000006715|ENST00000310301|VPS41;nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41 41.95555342248728 0.0647214845423414 1 {[CP]|[EA]}YDR 5 4 35.515 0.0 0.0 3.2596 0.0 0.0 0.0 452.2522982233032 452.2522982233032 3.574550232146688 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.6747425010840047 + {[CP]|[EA]}YDR 3.2596 + + 113 + 1 2.198 51622.1 1.0 3644 3477 7115 DOHH2_400M_050219_1,7123 DOHH2_400M_050219_1,7123,AEYDRPNLL True True AEYDRPNLL 39.630366 545.78135985136 1636691.125 7115.0 nc|ENSG00000006715|P49754-3|VPS41;;nc|ENSG00000006715|P49754-2|VPS41;;ENSG00000006715|ENST00000310301|VPS41 6.546627680460612 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7124 39.633 139.0 369270.0 25 0 33898.0 + 5907 DPYLKPYAV 9 88 533.2845721990927 1064.5545914649854 2 533.2847778201103 MULTI CID FTMS 0 0 0 7115 214488.234375 0.5701967860038918 -1 0.1228446960449218 9 Unmodified _DPYLKPYAV_ ENSG00000114480|ENST00000429644|GBE1 58.6788170122104 0.0268135626297836 1 DPY{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV 9 0 + 90.02 0.0 0.0 8.4561 8.4561 95.866 0.0 0.0 0.0 32.66477716107977 14.973024840566469 14.973024840566469 15.039237471316298 0 1.7302046884880935 1.6989700043360187 0.2887254899964357 0.4247425010840047 + + DPY{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV;DPY{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L};DPY{I|L}K[Y{I|L}][PG];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KA{I|L}Y[DP]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AK{I|L}Y[DP]V;D[{I|L}T]Y{I|L}A[RD]V;D[{I|L}T]Y{I|L}[RD]AV;D[{I|L}T]Y{I|L}G{[RE]|[WV]}V;[QT]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV;[PS]{M(Oxidation (M))|F}K{I|L}Y[DP]V 8.4561;7.0434;6.0509;3.7741;3.7741;2.8599;2.5772;2.4861;2.3939;2.3787 +;-;-;-;-;-;-;-;-;- + 488 + 1 2.198 50202.6 1.0 3645 3477 7115 DOHH2_400M_050219_1,7124 DOHH2_400M_050219_1,7124,DPYLKPYAV True True DPYLKPYAV 39.633182 533.28477782011 2351393.75 7115.0 ENSG00000114480|ENST00000429644|GBE1 8.248563607533773 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7125 39.64 361.0 290500.0 25 0 29896.0 + + 19865 HLILRAEGL 9 118 510.8101237262474 1019.6056945192948 2 511.3112670779228 MULTI CID FTMS 0 0 0 7115 192196.453125 0.595872597328348 -1 0.1228446960449218 10 Unmodified _LHLVSELPL_ ENSG00000163832|ENST00000296149|ELP6;nc|ENSG00000163832|Q0PNE2-2|ELP6 14.581692164780916 0.4419739649577144 1 [H{I|L}]{I|L} 3 -1 25.942 0.0 0.0 2.5443 0.0 0.0 0.0 653.3543877168136 653.3543877168136 13.239087409443185 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]{I|L} 2.5443 + + 73 1 2.198 83467.3 1.0 3646 3477 7115 DOHH2_400M_050219_1,7125 DOHH2_400M_050219_1,7125,LHLVSELPL False False HLILRAEGL 39.639699 511.311267077923 2249522.5 7115.0 ENSG00000163832|ENST00000296149|ELP6;;nc|ENSG00000163832|Q0PNE2-2|ELP6 3.531802495320638 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7126 39.649 504.0 145240.0 25 0 14119.0 + 701 AENPGKYNIL 10 105 559.796326415304 0 559.7960693240166 PEAK CID FTMS 0 0 0 7115 178371.046875 1.0 0 0.0 11 Unmodified _AENPGKYNIL_ ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU 39.94969957227396 0.1110137703778733 1 NP{M(Oxidation (M))|F} 3 8 20.93 0.0 0.0 1.8728 0.0 0.0 200.0804935515078 556.2921236627561 756.372617214264 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 NP{M(Oxidation (M))|F} 1.8728 - 72 + 1 2.198 59400.6 1.0 3647 3477 7115 DOHH2_400M_050219_1,7126 DOHH2_400M_050219_1,7126,AENPGKYNIL True True AENPGKYNIL 39.648597 559.796069324017 997660.8125 7115.0 ENSG00000153187|ENST00000640218|HNRNPU;;nc|ENSG00000153187|Q00839-2|HNRNPU 6.976412296295166 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7127 39.662 800.0 202360.0 25 0 21088.0 + 5144 DIIKKPIAL 9 160 505.83412207967535 1009.6536912261508 2 505.8335754275322 MULTI CID FTMS 0 0 0 7115 122133.171875 0.6988189801769872 -1 0.1228446960449218 12 Unmodified _DIIKKPIAL_ ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A 56.17704186161178 0.0281986971544335 1 D{I|L}{I|L}KK[{I|L}P]A{I|L} 9 0 + 74.549 0.0 0.0 7.3836 7.3836 83.104 0.0 0.0 0.0 39.63538040330974 8.142040441009044 8.142040441009044 1.7609125905568137 0 1.674742501084005 2.0 0.0 0.0 + + D{I|L}{I|L}KK[{I|L}P]A{I|L};{I|L}D{I|L}KK[{I|L}P]A{I|L} 7.3836;7.2092 +;- + 732 + 1 2.198 123752.4 0.5600000023841858 3648 3477 7115 DOHH2_400M_050219_1,7127 DOHH2_400M_050219_1,7127,DIIKKPIAL True True DIIKKPIAL 39.662411 505.833575427532 2041660.75 7115.0 ENSG00000198604|ENST00000360310|BAZ1A;;nc|ENSG00000198604|Q9NRL2-2|BAZ1A 2.975494464238485 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7128 39.676 800.0 98807.0 25 0 9327.4 -1 EQSINEMMAS 10 138 586.2340194687528 1170.4534860043054 2 586.2349120974541 MULTI CID FTMS 0 0 0 7115 122595.9375 0.2428743978549676 2 -0.2565193176269531 13 2 Oxidation (M) _EQSINEM(Oxidation (M))M(Oxidation (M))AS_ ENSG00000135090|ENST00000392533|TAOK3;ENST00000537569.1_1_12:118597941-118599673:-|nuORF 5.731851221503515 0.7001233259664787 1 {M(Oxidation (M))|F}YY 3 -1 23.188 0.0 0.0 1.9811 0.0 0.0 679.280220478718 0.0 679.280220478718 0.0 7.169081132677704 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}YY 1.9811 - 372 + 1 2.198 64240.5 0.6299999952316284 3649 3477 7115 DOHH2_400M_050219_1,7128 DOHH2_400M_050219_1,7128,EQSINEMMAS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7129 39.69 800.0 165930.0 25 0 12420.0 + 31306 RMDENSPLMY 10 136 628.2754104548062 1254.5362679764123 2 628.2761108279228 MULTI CID FTMS 0 0 0 7115 117976.4453125 1.0 0 0.0 14 Unmodified _RMDENSPLMY_ ENSG00000150995|ENST00000649015|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1 27.22323531849824 0.3570408936368626 1 [{I|L}P]M[CS]NS[{I|L}P]MY 11 4 + 40.014 0.0 0.0 3.1895 3.1895 79.954 0.0 0.0 0.0 5.448818584705073 27.504731258815085 5.448818584705073 10.285131569822102 0 1.424742501084005 1.154901959985743 0.5 0.0 [{I|L}P]M[CS]NS[{I|L}P]MY;[AG]HHENS[{I|L}P]MY;{[QS]|[NT]}[C(Carbamidomethyl (C))R]NS[{I|L}P]MY;[AG]S[C(Carbamidomethyl (C))R]NS[{I|L}P]MY;{[ES]|[DT]|[{I|L}C]}[VS]ENS[{I|L}P]MY;{[QS]|[NT]}Q{[MG]|[TS]}NS[{I|L}P]MY;[AG]SQ{[MG]|[TS]}NS[{I|L}P]MY;[PS]{[MS]|[{M(Oxidation (M))|F}A]}ENS[{I|L}P]MY 3.1895;2.3697;2.3269;2.3235;2.2236;2.0209;2.0204;1.8609 -;-;-;-;-;-;-;- 237 1 2.198 104558.7 0.6399999856948853 3650 3477 7115 DOHH2_400M_050219_1,7129 DOHH2_400M_050219_1,7129,RMDENSPLMY False True RMDENSPLMY 39.690078 628.276110827923 907172.1875 7115.0 nc|ENSG00000150995|Q14643-3|ITPR1;;nc|ENSG00000150995|Q14643-4|ITPR1;;nc|ENSG00000150995|Q14643-2|ITPR1;;nc|ENSG00000150995|Q14643-6|ITPR1;;nc|ENSG00000150995|Q14643-7|ITPR1;;nc|ENSG00000150995|Q14643-5|ITPR1;;nc|ENSG00000150995|Q14643-8|ITPR1;;ENSG00000150995|ENST00000649015|ITPR1 6.951957066853841 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7130 39.7 497.0 140640.0 25 0 6942.5 + 30003 EETQVILREY 10 110 640.7985083230396 1279.5824637128792 2 640.7989990115166 MULTI CID FTMS 0 0 0 7115 107072.0859375 0.447152798046955 1 -0.1145896911621093 15 Unmodified _QTFTSGKYYW_ nc|ENSG00000138031|O60266-2|ADCY3;ENSG00000138031|ENST00000679454|ADCY3;ENST00000498288.1_3_2:25042803-25043656:-|nuORF 17.11289562659939 0.5604042439455784 1 TQV{I|L}{I|L}VYW 8 7 59.093 0.0 0.0 4.6181 0.0 0.0 259.02356378381893 0.0 259.02356378381893 0.0 45.11352557452248 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 TQV{I|L}{I|L}VYW 4.6181 - 483 + 1 2.198 58861.0 1.0 3651 3477 7115 DOHH2_400M_050219_1,7130 DOHH2_400M_050219_1,7130,QTFTSGKYYW False False EETQVILREY 39.700309 640.798999011517 321223.96875 7115.0 nc|ENSG00000138031|O60266-2|ADCY3;;ENSG00000138031|ENST00000679454|ADCY3;;ENST00000498288.1_3_2:25042803-25043656:-|nuORF 4.863711992899577 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7131 39.714 800.0 119720.0 25 0 6086.8 -1 0 112 910.4235813558392 1818.8326097784784 2 910.9257079958916 MULTI CID FTMS 0 0 0 7115 111468.6484375 0.7390867535724631 -3 0.3294525146484375 16 1 [NP]{I|L}NMK[HD]DAN{I|L}DP[EP] 16 -1 + 79.005 0.0 0.0 4.3437 4.3437 76.116 0.0 0.0 0.0 9.8370348940025 7.659167939666318 7.659167939666318 3.6991128507179374 0 0.0 1.0457574905606752 0.4247425010840047 1.1549471895720984 [NP]{I|L}NMK[HD]DAN{I|L}DP[EP];[NP]{I|L}NMK[HD]WN{I|L}DP[EP];[NP]{I|L}NMK[HD]DY{I|L}HP[EP];[NP]{I|L}GGMK[HD]DAN{I|L}DP[EP];[NP]{I|L}NMK[HD]DAGG{I|L}DP[EP];[MN]P{[QV]|[N{I|L}]|[RA]|[KV]}K[HD]DAN{I|L}DP[EP];[MN]PN{I|L}K[HD]DY{I|L}HP[EP];[NP]{I|L}GGMK[HD]WN{I|L}DP[EP];[NP]{I|L}NMK[HD]WGG{I|L}DP[EP];[NP]{I|L}NMK[HD]DAN{I|L}NP{[QV]|[N{I|L}]|[RA]|[KV]} 4.3437;4.1403;4.0576;3.8481;3.8481;3.8029;3.6917;3.6438;3.6438;3.6379 -;-;-;-;-;-;-;-;-;- 3131 1 2.198 67212.4 0.5400000214576721 3652 3477 7115 DOHH2_400M_050219_1,7131 DOHH2_400M_050219_1,7131, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7132 39.724 559.0 182710.0 25 0 13936.0 + 20325 LLEVLEISI 9 131 514.8140253969032 1027.6134978606062 2 514.8135864138603 MULTI CID FTMS 0 0 0 7115 101751.7421875 0.9883883057998596 -1 0.1228446960449218 17 Unmodified _LLEVLEISI_ ENST00000346964.6_2_3:196863483-196863546:-|nuORF 57.47134341890925 0.0274820932774257 1 K{I|L}{I|L}S{I|L} 5 5 44.619 0.0 0.0 4.342 0.0 0.0 455.2245045392594 0.0 455.2245045392594 0.0 26.660050541291906 0.0 0.0 0 1.0021934810768762 0.0 0.3494850021680094 0.3054621874040891 K{I|L}{I|L}S{I|L} 4.342 - 427 1 2.198 83295.4 1.0 3653 3477 7115 DOHH2_400M_050219_1,7132 DOHH2_400M_050219_1,7132,LLEVLEISI True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7134 39.729 38.0 1268700.0 25 0 269120.0 43380 WQGKKPGL 8 72 457.2644018435216 912.5142507538432 2 457.2643005251884 MULTI CID FTMS 0 0 0 7133 1502210.75 0.9085298653166428 1 -0.1419296264648437 1 Unmodified _WQGKKPGL_ ENST00000558783.2_2_15:64665579-64665621:-|nuORF 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.198 45967.1 1.0 3654 3478 7133 DOHH2_400M_050219_1,7134 DOHH2_400M_050219_1,7134,WQGKKPGL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7135 39.73 41.0 1068000.0 25 0 105490.0 + 38576 TTDFPGNYSGY 11 67 611.2567360477443 1220.4989191622883 2 611.2568237185478 MULTI CID FTMS 0 0 0 7133 1199193.25 0.8498901885305816 1 -0.1419296264648437 2 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 51.629811660486645 0.1086041609037681 1 {[DS]|[MA]|[CV]|TT}[C(Carbamidomethyl (C))R][DV]YSGY 10 5 {[DS]|[MA]|[CV]|TT}[C(Carbamidomethyl (C))R][DV]Y + + 20.802 -4.4812 -0.50049 1.7044 1.7044 48.695 0.0 0.0 0.0 0.0 0.5237875363565792 0.0 0.0 0 0.0 0.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}[C(Carbamidomethyl (C))R][DV]YSGY 1.7044 - 223 + 1 2.198 43657.7 1.0 3655 3478 7133 DOHH2_400M_050219_1,7135 DOHH2_400M_050219_1,7135,TTDFPGNYSGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7136 39.731 42.0 1242000.0 25 0 166900.0 + 11316 GEWASGGVRSF 11 68 576.7763716161812 1151.5381902991624 2 576.7756835818291 MULTI CID FTMS 0 0 0 7133 1113193.625 0.4443653900369491 -1 0.1145896911621093 3 Unmodified _GEWASGGVRSF_ ENSG00000126432|ENST00000265462|PRDX5;nc|ENSG00000126432|P30044-3|PRDX5;nc|ENSG00000126432|P30044-4|PRDX5 27.088373467376528 0.4561593585727911 1 WADASGR{[QV]|[N{I|L}]|[RA]|[KV]}Y 10 7 + 66.036 0.0 0.0 5.7346 5.7346 82.622 0.0 0.0 0.0 53.8173657553704 2.174617874626037 2.174617874626037 5.184465535402296 0 1.5924778212679485 1.5228787452803376 0.4247425010840047 0.0 WADASGR{[QV]|[N{I|L}]|[RA]|[KV]}Y;{[DA]|[EG]}WASGR{[QV]|[N{I|L}]|[RA]|[KV]}Y;{[DA]|[EG]}WASG[VG]{[QV]|[N{I|L}]|[RA]|[KV]}Y;{[DA]|[EG]}W{[QS]|[NT]}R{[QV]|[N{I|L}]|[RA]|[KV]}Y 5.7346;5.2844;4.4885;3.0467 -;-;-;- 125 + 1 2.198 46276.9 1.0 3656 3478 7133 DOHH2_400M_050219_1,7136 DOHH2_400M_050219_1,7136,GEWASGGVRSF False True GEWASGGVRSF 39.73115 576.775683581829 4864837.0 7133.0 ENSG00000126432|ENST00000265462|PRDX5;;nc|ENSG00000126432|P30044-3|PRDX5;;nc|ENSG00000126432|P30044-4|PRDX5 8.025310039520264 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7137 39.733 87.0 357850.0 25 0 45469.0 -1 0 40 964.4453572749215 2890.3142424249645 3 964.780322253704 MULTI CID FTMS 0 0 0 7133 756423.0 1.0 0 0.0 4 1 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3 -1 7.4473 0.0 0.0 0.25766 0.0 0.0 2497.18163761302 0.0 2497.18163761302 0.0 0.4575749056067497 0.0 0.0 0 0.0 0.0 0.0 0.0 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 0.25766 - 10 1 2.198 32288.6 1.0 3657 3478 7133 DOHH2_400M_050219_1,7137 DOHH2_400M_050219_1,7137, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7138 39.735 68.0 696610.0 25 0 73489.0 + 35207 SSDNIMVQY 9 79 528.7370552005904 1055.4595574679806 2 528.7373535037041 MULTI CID FTMS 0 0 0 7133 718134.1875 0.3479426706829255 -1 0.1145896911621093 5 Unmodified _SSDNIMVQY_ ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2 29.081581746732265 0.1611639662936252 1 [DN]SS{I|L}M 6 7 31.833 0.0 0.0 3.016 0.0 0.0 0.0 405.1767565248744 405.1767565248744 10.111075038854487 0.0 0.0 0.0 0 0.0 1.0 0.0 1.1989700043360187 [DN]SS{I|L}M 3.016 - 188 1 2.198 43098.2 1.0 3658 3478 7133 DOHH2_400M_050219_1,7138 DOHH2_400M_050219_1,7138,SSDNIMVQY False True SSDNIMVQY 39.734738 528.737353503704 10931472.0 7133.0 ENSG00000158623|ENST00000425248|COPG2;;nc|ENSG00000158623|Q9UBF2-2|COPG2;;ENSG00000181789|ENST00000314797|COPG1 6.255941073099772 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7139 39.737 134.0 412840.0 25 0 39429.0 + 23384 LTDPIQGTEY 10 100 568.777370502516 1135.5401880718318 2 568.7770873904228 MULTI CID FTMS 0 0 0 7133 341374.0625 0.5806869496575352 1 -0.1419296264648437 6 Unmodified _LTDPIQGTEY_ ENSG00000172175|ENST00000649217|MALT1;nc|ENSG00000172175|Q9UDY8-2|MALT1 29.081581746732265 0.3152867722954398 1 [{I|L}T]DP{I|L}Q 6 4 22.753 0.0 0.0 2.0037 0.0 0.0 0.0 465.1647357615381 465.1647357615381 4.036666894009969 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.8305982618198766 0.0 + [{I|L}T]DP{I|L}Q 2.0037 + + 690 1 2.198 48118.9 1.0 3659 3478 7133 DOHH2_400M_050219_1,7139 DOHH2_400M_050219_1,7139,LTDPIQGTEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7140 39.741 156.0 367470.0 25 0 53393.0 + 44019 YIGGLSTI 8 97 412.23104065552826 822.4475283778565 2 412.2303039431572 MULTI CID FTMS 0 0 0 7133 227129.671875 0.9419312251424627 -1 0.1145896911621093 7 Unmodified _YIGGLSTI_ REV__ENSG00000140832|ENST00000268485|MARVELD3 0.7936320650641473 0.8195151834710337 1 R 1 -1 0.9691 0.0 0.0 0.11783 0.0 0.0 584.3051161237535 79.01951013736561 663.3246262611191 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.11783 - 5 + 1 2.198 50070.0 1.0 3660 3478 7133 DOHH2_400M_050219_1,7140 DOHH2_400M_050219_1,7140,YIGGLSTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7141 39.746 273.0 254040.0 25 0 38659.0 + 33713 SKSTGKSI 8 106 404.2319440036525 806.4493350741051 2 404.2324096560478 MULTI CID FTMS 0 0 0 7133 213528.53125 0.877376220066683 1 -0.1419296264648437 8 Unmodified _SKSTGKSI_ REV__ENST00000416249.1_1_10:112629578-112631155:+|nuORF 2.302733041254933 0.8103549651115762 1 H 1 -1 9.6041 0.0 0.0 1.1909 0.0 0.0 651.3817366627754 0.0 651.3817366627754 0.0 9.326507130512718 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.1909 - 4 + 1 2.198 62651.7 1.0 3661 3478 7133 DOHH2_400M_050219_1,7141 DOHH2_400M_050219_1,7141,SKSTGKSI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7142 39.759 800.0 253740.0 25 0 13759.0 + 43266 AEMPGQGPGSDW 12 177 616.2580515275688 1230.5015501219375 2 616.2573119997978 MULTI CID FTMS 0 0 0 7133 194385.21875 0.9675686332917108 -1 0.1145896911621093 9 Unmodified _WFTMSFSYY_ ENST00000538285.6_1_12:110906680-110924532:+|nuORF;ENSG00000204856|ENST00000377673|FAM216A 30.22481116460888 0.1466181017706357 1 [PG]SDGWS{I|L}SYY 11 7 + 57.437 0.0 0.0 4.6678 4.6678 75.844 0.0 0.0 0.0 2.77366077466187 7.613805643466598 2.77366077466187 2.77366077466187 0 0.7302046884880937 0.619788758288394 1.6549471895720984 0.0 [PG]SDGWS{I|L}SYY;{[{M(Oxidation (M))|F}C]|[YS]}YWS{I|L}SYY;[PG]QAEMWSYY;[PG]GSDWS{I|L}SYY;[PG]SDG{[TV]|[{I|L}S]}WSYY;[PG]SGDWS{I|L}SYY;[PG]QGHHGTDYY;[QA]YNHG{M(Oxidation (M))|F}[MT]Y;[QA]YNHGESYY;[PG]SDWAWSYY 4.6678;4.4424;4.4174;4.1691;4.1655;4.1048;4.0719;4.049;4.0423;4.0296 -;-;-;-;-;-;-;-;-;- 6420 1 2.198 149243.9 0.8100000023841858 3662 3478 7133 DOHH2_400M_050219_1,7142 DOHH2_400M_050219_1,7142,WFTMSFSYY False False AEMPGQGPGSDW 39.759413 616.257311999798 2061963.375 7133.0 ENST00000538285.6_1_12:110906680-110924532:+|nuORF;;ENSG00000204856|ENST00000377673|FAM216A 6.338630040486653 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7143 39.763 174.0 399750.0 25 0 64060.0 + 22912 LSDLGKLSY 9 109 498.2740002291368 994.5334475250736 2 498.2740661501884 MULTI CID FTMS 0 0 0 7133 180355.046875 0.9069137510060912 -1 0.1145896911621093 10 Unmodified _LSDLGKLSY_ ENSG00000103510|ENST00000219797|KAT8;ENST00000538768.2_1_16:31138259-31142577:+|nuORF;nc|ENSG00000103510|Q9H7Z6-2|KAT8 53.40400417844725 0.0329064971918313 1 {I|L}SD{I|L}GK{I|L}SY 9 0 + 68.593 0.0 0.0 6.897 6.897 94.902 0.0 0.0 0.0 39.09379381312206 5.612475468578744 5.612475468578744 27.21848749616356 0 1.242992819099939 2.0 0.0 0.0 + + {I|L}SD{I|L}GK{I|L}SY;{I|L}S{[RE]|[WV]}K{I|L}SY;{I|L}QQK[KT]SY;{I|L}QQK{[HG]|PP}VW;{[TV]|[{I|L}S]}[KG]{I|L}{[TV]|[{I|L}S]}DY;{I|L}WWK{I|L}SY;[KG]{I|L}{I|L}{[WT]|[RM]}DY;[KG]{I|L}{I|L}S{[TV]|[{I|L}S]}DY;[KG]{I|L}S{I|L}{[TV]|[{I|L}S]}DY 6.897;4.1602;2.3763;2.1196;1.9423;1.0776;0.93518;0.62707;0.14733 +;-;-;-;-;-;-;-;- + 800 + 1 2.198 57517.8 1.0 3663 3478 7133 DOHH2_400M_050219_1,7143 DOHH2_400M_050219_1,7143,LSDLGKLSY True True LSDLGKLSY 39.7628 498.274066150188 1451597.75 7133.0 ENST00000538768.2_1_16:31138259-31142577:+|nuORF;;ENSG00000103510|ENST00000219797|KAT8;;nc|ENSG00000103510|Q9H7Z6-2|KAT8 5.436700979868571 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7144 39.777 800.0 163870.0 25 0 20601.0 -1 0 100 905.4481549086664 1808.8817568841323 2 905.9481078982352 MULTI CID FTMS 0 0 0 7133 129580.703125 0.1977225193577295 3 -0.3806381225585937 11 1 EEN{I|L}DP[KC] 8 -1 34.602 0.0 0.0 1.9129 0.0 0.0 862.4306456405673 0.0 862.4306456405673 0.0 16.5030565586067 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 EEN{I|L}DP[KC] 1.9129 - 536 1 2.198 93661.4 0.6399999856948853 3664 3478 7133 DOHH2_400M_050219_1,7144 DOHH2_400M_050219_1,7144, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7145 39.79 800.0 259040.0 25 0 13354.0 -1 NMMRRKEQEHM 11 160 753.3441398103855 1504.673726687571 2 753.3437377810478 MULTI CID FTMS 0 0 0 7133 117030.9921875 0.4366298571535168 -1 0.1145896911621093 12 Oxidation (M) _NMM(Oxidation (M))RRKEQEHM_ ENSG00000116459|ENST00000369722|ATP5PB 17.11289562659939 0.6791789249425932 1 [MN]PN{I|L}NEAAGRGD{M(Oxidation (M))|F} 14 -1 + 99.477 0.0 0.0 6.6112 6.6112 83.841 0.0 0.0 0.0 40.70716521681016 7.39219589923627 7.39219589923627 3.657553253006356 0 1.6080670093629827 1.5228787452803376 0.8703715150305281 1.7614393726401687 [MN]PN{I|L}NEAAGRGD{M(Oxidation (M))|F};[MN]PN{I|L}NE[QA]RGD{M(Oxidation (M))|F};[MN]PN{I|L}N[RD]GRGD{M(Oxidation (M))|F};[MN]PN{I|L}NEAAEQQ{M(Oxidation (M))|F};[MN]PN{I|L}NEAAG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F};[MN]PN{I|L}NE[RD]QQ{M(Oxidation (M))|F};[MN]PN{I|L}NEAAE{[QG]|[NA]}A{M(Oxidation (M))|F};[MN]PN{I|L}NEAAG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PN{I|L}NE[QA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F};[MN]PN{I|L}N[RD]EQQ{M(Oxidation (M))|F} 6.6112;6.3681;6.1681;5.7517;5.5946;5.5103;5.3946;5.3828;5.3516;5.3103 -;-;-;-;-;-;-;-;-;- 8378 + 1 2.198 143378.5 0.6299999952316284 3665 3478 7133 DOHH2_400M_050219_1,7145 DOHH2_400M_050219_1,7145,NMMRRKEQEHM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7146 39.8 533.0 252960.0 25 0 14413.0 + -1 GEFSEAIKAY 10 174 558.239522259161 1114.464491585122 2 558.2398559451103 MULTI CID FTMS 0 0 0 7133 109020.09375 1.0 0 0.0 13 Carbamidomethyl (C) _ASPCRVHAC(Carbamidomethyl (C))D_ ENSG00000018699|ENST00000317907|TTC27 14.838274106304384 0.5985701837916485 1 {[CT]|[{M(Oxidation (M))|F}G]}Q{I|L}S[QA]SDY 10 -1 + 28.836 0.0 0.0 2.5874 2.5874 76.388 0.0 0.0 0.0 5.648350154927826 12.866131365457443 5.648350154927826 9.164539485499253 0 0.0 0.0 0.3252574989159953 0.0 {[CT]|[{M(Oxidation (M))|F}G]}Q{I|L}S[QA]SDY;{[CT]|[{M(Oxidation (M))|F}G]}[AG]{I|L}S[QA]SDY;{[CT]|[{M(Oxidation (M))|F}G]}Q{I|L}SE[NG]TY;{[CT]|[{M(Oxidation (M))|F}G]}Q{[C(Carbamidomethyl (C))E]|[WC]}{I|L}[KA]Y;{[CT]|[{M(Oxidation (M))|F}G]}Q[DC]A{I|L}[KA]Y;{[CT]|[{M(Oxidation (M))|F}G]}GC(Carbamidomethyl (C))EA{I|L}[KA]Y;{[CT]|[{M(Oxidation (M))|F}G]}Q[QP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TY;{[CT]|[{M(Oxidation (M))|F}G]}Q{[C(Carbamidomethyl (C))E]|[WC]}RRY;{[CT]|[{M(Oxidation (M))|F}G]}[AG]{I|L}SE[NG]TY;{[CT]|[{M(Oxidation (M))|F}G]}Q[DC]ARRY 2.5874;1.7651;1.401;1.3392;1.0691;1.0088;0.79898;0.75792;0.57868;0.48297 -;-;-;-;-;-;-;-;-;- 985 + 1 2.198 104674.1 1.0 3666 3478 7133 DOHH2_400M_050219_1,7146 DOHH2_400M_050219_1,7146,ASPCRVHACD False False GEFSEAIKAY 39.799877 558.23985594511 381174.34375 7133.0 ENSG00000018699|ENST00000317907|TTC27 4.070009231567383 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7147 39.815 800.0 93105.0 25 0 4341.4 + -1 YLQWEMNLCIY 11 102 746.33529827334 1490.6560436134798 2 746.3349487185478 MULTI CID FTMS 0 0 0 7133 110852.9453125 0.2041156856135754 2 -0.2654914855957031 14 Oxidation (M) _YLQWEM(Oxidation (M))NLCIY_ REV__ENSG00000165899|ENST00000547103|OTOGL 3.5964929083625545 0.858179447565866 1 [MN]PN{I|L}GGADQ 10 -1 65.641 0.0 0.0 4.4035 0.0 0.0 0.0 490.20566736392817 490.20566736392817 36.65714005218824 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.6549471895720984 [MN]PN{I|L}GGADQ 4.4035 - 2458 + 1 2.198 57952.2 0.6100000143051147 3667 3478 7133 DOHH2_400M_050219_1,7147 DOHH2_400M_050219_1,7147,YLQWEMNLCIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7148 39.821 344.0 172110.0 25 0 13747.0 + 32732 SEARPPPLL 9 104 490.2823534480273 0 490.2816650271416 PEAK CID FTMS 0 0 0 7133 111255.484375 1.0 0 0.0 15 Unmodified _SEARPPPLL_ ENSG00000175600|ENST00000335693|SUGCT;ENST00000460466.1_1_7:40847931-40900075:+|nuORF;nc|ENSG00000175600|Q9HAC7-2|SUGCT;nc|ENSG00000175600|Q9HAC7-3|SUGCT;nc|ENSG00000175600|Q9HAC7-4|SUGCT 29.081581746732265 0.1187435359889091 1 P{M(Oxidation (M))|F} 2 8 10.969 0.0 0.0 1.121 0.0 0.0 244.17836708295084 487.2562960260376 731.4346631089884 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F} 1.121 - 56 + 1 2.198 49805.1 1.0 3668 3478 7133 DOHH2_400M_050219_1,7148 DOHH2_400M_050219_1,7148,SEARPPPLL True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7149 39.835 800.0 82631.0 25 0 4612.3 + 26449 NTERTVWQY 9 120 598.7884685593591 1195.562384185518 2 598.7883788943291 MULTI CID FTMS 0 0 0 7133 86325.0234375 0.5165107542805087 1 -0.1419296264648437 16 Unmodified _NTERTVWQY_ ENSG00000179295|ENST00000351677|PTPN11;nc|ENSG00000179295|Q06124-1|PTPN11;nc|ENSG00000179295|Q06124-3|PTPN11 20.871137199558856 0.271726097625075 1 {[QS]|[NT]}{[RE]|[WV]}TVWQY 9 0 + 49.16 0.0 0.0 4.1119 4.1119 81.268 0.0 0.0 0.0 10.260394762458128 16.478174818886373 10.260394762458128 9.208187539523747 0 0.8494850021680094 1.154901959985743 0.0 0.3252574989159953 + + {[QS]|[NT]}{[RE]|[WV]}TVWQY;{[QS]|[NT]}{[RE]|[WV]}TVW[AG]Y;{[QS]|[NT]}{[RE]|[WV]}TV{[DA]|[EG]}QY;[WQ][VS]TVWQY;{[TV]|[{I|L}S]}{[WN]|[YH]}TVWQY;[WQ]{[WT]|[RM]}VWQY;[WQ][VS]TV{[DA]|[EG]}QY;[WQ][VS]TVW[AG]Y;{[TV]|[{I|L}S]}{[WN]|[YH]}TV{[DA]|[EG]}QY;{[TV]|[{I|L}S]}{[WN]|[YH]}TVW[AG]Y 4.1119;3.3417;3.3417;3.2537;2.8444;2.7118;2.4835;2.4835;2.0742;2.0742 +;-;-;-;-;-;-;-;-;- + 298 1 2.198 53799.3 0.550000011920929 3669 3478 7133 DOHH2_400M_050219_1,7149 DOHH2_400M_050219_1,7149,NTERTVWQY False True NTERTVWQY 39.835239 598.788378894329 816984.0625 7133.0 nc|ENSG00000179295|Q06124-1|PTPN11;;nc|ENSG00000179295|Q06124-3|PTPN11;;ENSG00000179295|ENST00000351677|PTPN11 6.81718111038208 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7150 39.837 31.0 1600500.0 25 0 135620.0 + -1 KEIGDVENW 9 77 545.2638133053467 544.2565368387467 1 545.2642089724541 MULTI CID FTMS 0 0 0 7133 697633.625 0.4193312391824997 -1 0.1145896911621093 17 ENSG00000135441|ENST00000548925|BLOC1S1;nc|ENSG00000135441|P78537-2|BLOC1S1 1 NW 2 -1 19.693 0.0 0.0 3.6183 0.0 0.0 226.12392072722167 0.0 226.12392072722167 0.0 9.208187539523747 0.0 0.0 0 0.0 0.0 0.0 0.5 NW 3.6183 - 33 + 1 2.198 45452.6 1.0 3670 3478 7133 DOHH2_400M_050219_1,7150 DOHH2_400M_050219_1,7150, False False KEIGDVENW 39.837425 545.264208972454 9376628.0 7133.0 ENSG00000135441|ENST00000548925|BLOC1S1;;nc|ENSG00000135441|P78537-2|BLOC1S1 5.080045382181804 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7151 39.841 174.0 419900.0 25 0 32157.0 + 5477 DLRTKATIEL 10 107 580.3376890033638 1158.6608250735276 2 580.3376342654228 MULTI CID FTMS 0 0 0 7133 104936.1875 0.252542889772073 -1 0.1145896911621093 18 Unmodified _DLRTKATIEL_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 55.23464941255904 0.0494277333541689 1 [{I|L}T][RD]KAT{I|L}E{I|L} 10 2 + 65.213 0.0 0.0 5.6283 5.6283 82.491 0.0 0.0 0.0 5.580371765640422 13.33735964571133 5.580371765640422 5.580371765640422 0 0.7302046884880937 1.5228787452803376 1.6307196863200843 0.0 [{I|L}T][RD]KAT{I|L}E{I|L};{I|L}{M(Oxidation (M))|F}{I|L}TAK[QP]E{I|L};[{I|L}T][RD]KATE{I|L}{I|L};[{I|L}T][RD]KAET{I|L}{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}KAT{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QN]|[E{I|L}]|[KN]}KAT{I|L}E{I|L};{[ES]|[DT]|[{I|L}C]}[R{I|L}]KAT{I|L}E{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}KATE{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QN]|[E{I|L}]|[KN]}KATE{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}[R{I|L}]KATE{I|L}{I|L} 5.6283;5.1467;4.9772;4.1339;3.6419;3.5158;3.2838;2.9908;2.8647;2.6327 -;-;-;-;-;-;-;-;-;- 438 1 2.198 59223.4 1.0 3671 3478 7133 DOHH2_400M_050219_1,7151 DOHH2_400M_050219_1,7151,DLRTKATIEL True True DLRTKATIEL 39.840829 580.337634265423 2280195.25 7133.0 nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4 6.293878237406413 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7152 39.852 645.0 171210.0 25 0 27469.0 23737 LTVTVTSVK 9 156 474.2902681001097 946.5659832670194 2 474.2903625369072 MULTI CID FTMS 0 0 0 7133 107842.96875 1.0 0 0.0 19 Unmodified _LTVTVTSVK_ ENSG00000169876|ENST00000306151|MUC17;nc|ENSG00000169876|Q685J3-2|MUC17 6.723162845929126 0.6799819581413107 1 {I|L} 1 8 11.109 0.0 0.0 1.1736 0.0 0.0 815.4710411056898 0.0 815.4710411056898 0.0 1.712113404111033 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1736 + + 96 + 1 2.198 88078.7 1.0 3672 3478 7133 DOHH2_400M_050219_1,7152 DOHH2_400M_050219_1,7152,LTVTVTSVK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7153 39.866 800.0 65304.0 25 0 13896.0 -1 0 92 696.4380744957574 695.4307980291574 1 696.4377319216728 MULTI CID FTMS 0 0 0 7133 101584.21875 0.0215165324428002 6 -0.7125320434570312 20 1 Y 1 -1 10.969 0.0 0.0 1.5773 0.0 0.0 514.3565315270074 0.0 514.3565315270074 0.0 0.5904965603899726 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5773 - 15 + 1 2.198 44934.2 0.5400000214576721 3673 3478 7133 DOHH2_400M_050219_1,7153 DOHH2_400M_050219_1,7153, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7155 39.872 149.0 315200.0 25 0 34293.0 + 5401 DLKVKLTEV 9 86 522.8187383484941 1043.622923763788 2 522.8187744021416 MULTI CID FTMS 0 0 0 7154 260020.484375 0.20127774934631 1 -0.1235618591308593 1 Unmodified _DLKVKLTEV_ ENSG00000132467|ENST00000254803|UTP3 25.997395711884035 0.2004055669077203 1 D{I|L}KV 4 5 61.186 0.0 0.0 5.8628 0.0 0.0 0.0 585.3247164361936 585.3247164361936 42.29818770663016 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + D{I|L}KV 5.8628 + + 82 + 1 2.198 42523.9 1.0 3674 3479 7154 DOHH2_400M_050219_1,7155 DOHH2_400M_050219_1,7155,DLKVKLTEV False True DLKVKLTEV 39.872268 522.818774402142 7203984.0 7154.0 ENSG00000132467|ENST00000254803|UTP3 0.4834407369295756 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7156 39.874 61.0 659680.0 25 0 132810.0 35535 STPDHSFSL 9 63 495.730052618741 989.4455523042822 2 495.7301513552666 MULTI CID FTMS 0 0 0 7154 169070.5 0.0685578791198041 2 -0.23870849609375 2 Unmodified _STPDHSFSL_ ENSG00000128272|ENST00000674920|ATF4 12.531546534597751 0.4974689918368763 1 {[TV]|[{I|L}S]}A 3 8 27.447 0.0 0.0 2.774 0.0 0.0 0.0 715.2691051209415 715.2691051209415 14.973024840566469 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}A 2.774 - 51 1 2.198 37617.3 1.0 3675 3479 7154 DOHH2_400M_050219_1,7156 DOHH2_400M_050219_1,7156,STPDHSFSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7157 39.875 44.0 1356200.0 25 0 153100.0 + 41784 VPVLCIEL 8 102 443.2604917489192 0 443.2611266970634 PEAK CID FTMS 0 0 0 7154 877394.9375 1.0 0 0.0 3 Unmodified _VPVLCIEL_ REV__ENSG00000148840|ENST00000278070|PPRC1;REV__nc|ENSG00000148840|Q5VV67-2|PPRC1 15.768221252438446 0.4767174489346095 1 E{I|L}A 3 -1 20.445 0.0 0.0 2.3115 0.0 0.0 131.09433447264456 437.2272738092407 568.3216082818852 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 E{I|L}A 2.3115 - 21 + 1 2.198 53077.0 1.0 3676 3479 7154 DOHH2_400M_050219_1,7157 DOHH2_400M_050219_1,7157,VPVLCIEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7158 39.877 66.0 859400.0 25 0 211440.0 + 37257 TIMPRGPTL 9 70 493.27832083103306 984.542088728866 2 493.2787658572197 MULTI CID FTMS 0 0 0 7154 715600.3125 1.0 0 0.0 4 Unmodified _TIMPRGPTL_ ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1 18.1463463914782 0.3454829746528889 1 [{I|L}T]MP 4 5 38.06 0.0 0.0 3.8657 0.0 0.0 0.0 539.2940767877561 539.2940767877561 24.960762528683706 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}T]MP 3.8657 + + 26 + 1 2.198 48184.5 1.0 3677 3479 7154 DOHH2_400M_050219_1,7158 DOHH2_400M_050219_1,7158,TIMPRGPTL False True TIMPRGPTL 39.876562 493.27876585722 4657943.0 7154.0 nc|ENSG00000136758|Q96TA2|YME1L1;;nc|ENSG00000136758|Q96TA2-3|YME1L1;;ENSG00000136758|ENST00000376016|YME1L1 4.315726280212402 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7159 39.878 65.0 759010.0 25 0 177940.0 + 22882 SIAPRMMSV 9 63 496.2567715343345 990.4989901354692 2 496.2567626833916 MULTI CID FTMS 0 0 0 7154 716785.625 1.0 0 0.0 5 Unmodified _LSAWESSIV_ ENSG00000047315|ENST00000314595|POLR2B 25.399314129420983 0.2080152500878129 1 {[TV]|[{I|L}S]}A[WE]S{I|L}[VS] 9 2 + 47.113 0.0 0.0 4.7565 4.7565 88.523 0.0 0.0 0.0 3.172874778693356 20.915149811213496 3.172874778693356 47.11303739409743 0 1.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}A[WE]S{I|L}[VS] 4.7565 - 67 1 2.198 41820.2 1.0 3678 3479 7154 DOHH2_400M_050219_1,7159 DOHH2_400M_050219_1,7159,LSAWESSIV False False SIAPRMMSV 39.878118 496.256762683392 4126212.75 7154.0 ENSG00000047315|ENST00000314595|POLR2B 5.809898058573405 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7160 39.88 102.0 579510.0 25 0 90215.0 + 24447 MHIPTGVI 8 77 434.2433033952613 866.4720538573225 2 434.2430908083916 MULTI CID FTMS 0 0 0 7154 531293.4375 0.5599219308692591 2 -0.23870849609375 6 Unmodified _MHIPTGVI_ REV__ENSG00000133059|ENST00000367162|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-3|DSTYK 2.889219685676258 0.8067950007271085 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.198 52786.5 1.0 3679 3479 7154 DOHH2_400M_050219_1,7160 DOHH2_400M_050219_1,7160,MHIPTGVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7161 39.883 162.0 477220.0 25 0 75402.0 + 14296 IEKPPVGTW 9 100 513.7847864950697 1025.5550200569394 2 513.7847167849541 MULTI CID FTMS 0 0 0 7154 430805.75 1.0 0 0.0 7 Unmodified _IEKPPVGTW_ ENSG00000122122|ENST00000356892|SASH3 51.629811660486645 0.0367964933207742 1 {I|L}EKP[RP]TW 8 2 + 85.201 0.0 0.0 8.3078 8.3078 96.302 0.0 0.0 0.0 28.69856144626052 14.024174299985006 14.024174299985006 18.5353127608304 0 1.1307196863200843 1.6989700043360187 1.2302046884880935 0.4247425010840047 {I|L}EKP[RP]TW;{I|L}EKP{[SA]|[TG]}[VP]W;{I|L}EKW[HK]W;{I|L}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}KKTW;[VP]PGTKE{I|L}W;[VP]PGTKEGE{I|L};{I|L}EKP{[SA]|[TG]}W[VP];[VP]PGTKEW{I|L};{[CT]|[{M(Oxidation (M))|F}G]}TKK{M(Oxidation (M))|F}GE{I|L};[VP]GPTKE{I|L}W 8.3078;6.5004;6.4428;6.3483;4.856;4.7646;4.6014;4.4212;4.3027;4.1341 -;-;-;-;-;-;-;-;-;- 899 + 1 2.198 62984.3 1.0 3680 3479 7154 DOHH2_400M_050219_1,7161 DOHH2_400M_050219_1,7161,IEKPPVGTW True True IEKPPVGTW 39.883489 513.784716784954 2783648.5 7154.0 ENSG00000122122|ENST00000356892|SASH3 6.684775193532308 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7162 39.886 130.0 536610.0 25 0 40472.0 + 7820 ELKEKYISL 9 100 561.824164845777 1121.633776758354 2 561.8243286013603 MULTI CID FTMS 0 0 0 7154 359861.625 1.0 0 0.0 8 Unmodified _ELKEKYISL_ ENSG00000179562|ENST00000321407|GCC1 49.55428908609986 0.0413471690215031 1 {[TV]|[{I|L}S]}GYK{I|L}E{I|L}S{I|L} 10 5 + 32.616 0.0 0.0 2.9079 2.9079 69.7 0.0 0.0 0.0 4.802598289338366 4.802598289338366 4.802598289338366 1.9054401621374808 0 0.7742275032520141 1.2218487496163564 1.2134679910804405 0.0 {[TV]|[{I|L}S]}GYK{I|L}E{I|L}S{I|L};{[TV]|[{I|L}S]}G{I|L}[YK]E{I|L}S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}E{I|L}K{[DS]|[MA]|[CV]|TT}S{I|L};[HV]{I|L}[NP]P[{M(Oxidation (M))|F}V]S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WK{I|L}E{I|L}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YK{I|L}E{I|L}S{I|L};[{I|L}T][VG][YK]E{I|L}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[YK]E{I|L}S{I|L};{[TV]|[{I|L}S]}GYK{I|L}[VP][{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}G{I|L}[YK][VP][{M(Oxidation (M))|F}V] 2.9079;2.738;2.4797;1.9732;1.8506;1.7729;1.7322;1.6031;1.1498;0.9799 -;-;-;-;-;-;-;-;-;- 588 1 2.198 59015.8 1.0 3681 3479 7154 DOHH2_400M_050219_1,7162 DOHH2_400M_050219_1,7162,ELKEKYISL True True ELKEKYISL 39.886151 561.82432860136 2307996.75 7154.0 ENSG00000179562|ENST00000321407|GCC1 5.521613438924153 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7163 39.893 402.0 241960.0 25 0 22367.0 32873 SEIEDENDAD 10 138 568.7160448203228 1135.4175367074456 2 568.7160522341728 MULTI CID FTMS 0 0 0 7154 273228.28125 1.0 0 0.0 9 Unmodified _SEIEDENDAD_ CON__Q28107 6.723162845929126 0.6955379296933136 1 [NS]E{I|L}SCQ{I|L} 8 8 44.917 0.0 0.0 3.956 0.0 0.0 0.0 258.00784367449563 258.00784367449563 21.318521495664825 0.0 0.0 0.0 0 0.0 0.638272163982407 1.725998565071222 0.9749073637206092 [NS]E{I|L}SCQ{I|L} 3.956 - 1340 1 2.198 77266.0 1.0 3682 3479 7154 DOHH2_400M_050219_1,7163 DOHH2_400M_050219_1,7163,SEIEDENDAD False False False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 7164 39.897 213.0 274760.0 25 0 15162.0 + + -1 DSDESYMEKSLY 12 95 733.8040500092683 1465.5935470853365 2 733.8035766482353 MULTI CID FTMS 0 0 0 7154 217713.671875 1.0 0 0.0 10 Oxidation (M) _SYNEM(Oxidation (M))MVDWYL_ ENSG00000092853|ENST00000318121|CLSPN;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN 5.731851221503515 0.8481046878870278 1 {[DS]|[MA]|[CV]|TT}DESYME[KS]{I|L}Y 12 -1 {[DS]|[MA]|[CV]|TT}DE + + 42.384 20.534 4.6027 2.8919 2.8919 50.21 0.0 0.0 0.0 0.0 21.84955642535897 0.0 0.0 0 1.1237125054200234 0.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}DESYME[KS]{I|L}Y 2.8919 - 333 + 1 2.198 49880.6 1.0 3683 3479 7154 DOHH2_400M_050219_1,7164 DOHH2_400M_050219_1,7164,SYNEMMVDWYL False False DSDESYMEKSLY 39.89741 733.803576648235 1726889.25 7154.0 ENSG00000092853|ENST00000318121|CLSPN;;nc|ENSG00000092853|Q9HAW4-2|CLSPN;;nc|ENSG00000092853|Q9HAW4-3|CLSPN 9.418889681498207 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7165 39.9 156.0 237400.0 25 0 24141.0 37758 TLRPGARE 8 77 450.2554033044344 898.4962536756688 2 450.2564269900322 MULTI CID FTMS 0 0 0 7154 234024.046875 0.9061602217783176 -1 0.1419296264648437 11 Unmodified _TLRPGARE_ ENST00000376259.6_1_1:12227075-12248914:+|nuORF 2.302733041254933 0.8103549651115762 1 G 1 7 3.9794 0.0 0.0 0.4429 0.0 0.0 448.2222191071125 390.2231539361938 838.4453730433063 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 0.4429 + + 1 + 1 2.198 38625.3 1.0 3684 3479 7154 DOHH2_400M_050219_1,7165 DOHH2_400M_050219_1,7165,TLRPGARE False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7166 39.905 218.0 297990.0 25 0 22587.0 + 27588 PLDHLKPLEY 10 98 408.8925425251417 1223.6557981756253 3 408.8921386599541 MULTI CID FTMS 0 0 0 7154 205177.359375 1.0 0 0.0 12 Unmodified _PLDHLKPLEY_ ENSG00000135763|ENST00000258243|URB2 21.53697664764585 0.484802182336468 1 [{I|L}P]DH{I|L}KE 7 3 41.77 0.0 0.0 3.4136 0.0 0.0 0.0 388.1901255736022 388.1901255736022 26.285626825958985 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.5 0.0 [{I|L}P]DH{I|L}KE 3.4136 - 247 1 2.198 57517.7 1.0 3685 3479 7154 DOHH2_400M_050219_1,7166 DOHH2_400M_050219_1,7166,PLDHLKPLEY False True PLDHLKPLEY 39.904612 408.8929 757773.875 7154.0 ENSG00000135763|ENST00000258243|URB2 3.696635246276856 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7167 39.911 370.0 338770.0 25 0 56710.0 + + 32772 FSDYLHPQY 9 132 585.2637516845746 1168.512950435949 2 585.2661010622978 MULTI CID FTMS 0 0 0 7154 170588.359375 0.8717178502365681 -1 0.1419296264648437 13 Unmodified _SEDVEIVESY_ nc|ENSG00000260916|Q9ULG6|CCPG1;nc|ENSG00000260916|Q9ULG6-2|CCPG1;nc|ENSG00000260916|Q9ULG6-4|CCPG1;ENSG00000260916|ENST00000442196|CCPG1;ENST00000568372.5_1_15:55651699-55664264:-|nuORF 14.838274106304384 0.5985701837916485 1 {M(Oxidation (M))|F}SDY[H{I|L}]PQY 9 -1 + 54.294 0.0 0.0 4.6464 4.6464 74.815 0.0 0.0 0.0 19.58677420117777 11.59765299137284 11.59765299137284 1.9453781259591096 0 0.8494850021680094 0.0 0.0 0.6747425010840047 {M(Oxidation (M))|F}SDY[H{I|L}]PQY;{M(Oxidation (M))|F}SYD[H{I|L}]PQY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TA][H{I|L}]YDSE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TA][H{I|L}]DYSE;{M(Oxidation (M))|F}SYRS{I|L}{M(Oxidation (M))|F}SY;{M(Oxidation (M))|F}SYDK{I|L}{M(Oxidation (M))|F}SY;{M(Oxidation (M))|F}SYRD[YR]Y;{[QV]|[N{I|L}]|[RA]|[KV]}WDSRYSE;{M(Oxidation (M))|F}SDYR[YR]Y;{[QV]|[N{I|L}]|[RA]|[KV]}WDKYDSE 4.6464;4.4799;4.394;4.2276;4.182;3.9243;3.5642;3.5642;3.4731;3.4731 -;-;-;-;-;-;-;-;-;- 1801 + 1 2.198 95384.9 1.0 3686 3479 7154 DOHH2_400M_050219_1,7167 DOHH2_400M_050219_1,7167,SEDVEIVESY False False FSDYLHPQY 39.911268 585.266101062298 1351967.125 7154.0 nc|ENSG00000260916|Q9ULG6|CCPG1;;nc|ENSG00000260916|Q9ULG6-2|CCPG1;;nc|ENSG00000260916|Q9ULG6-4|CCPG1;;ENSG00000260916|ENST00000442196|CCPG1;;ENST00000568372.5_1_15:55651699-55664264:-|nuORF 8.541200955708822 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7168 39.925 800.0 219830.0 25 0 11730.0 + 6898 EEFDRLVKEY 10 146 664.3298349788016 1326.6451170244031 2 664.8317748904228 MULTI CID FTMS 0 0 0 7154 130694.1484375 0.8169936884489962 -1 0.1419296264648437 14 Unmodified _EEFDRLVKEY_ ENSG00000092036|ENST00000541587|HAUS4;nc|ENSG00000092036|Q9H6D7-2|HAUS4;nc|ENSG00000092036|Q9H6D7-3|HAUS4;nc|ENSG00000092036|Q9H6D7-4|HAUS4 67.08073823543168 0.0190306485248484 1 EE[YT][PG]{I|L}VKEY 11 4 + 75.282 0.0 0.0 5.6746 5.6746 82.252 0.0 0.0 0.0 5.012262311882779 16.57577319177794 5.012262311882779 5.012262311882779 0 1.3494850021680094 1.5228787452803376 1.5044321917401078 0.8494850021680094 EE[YT][PG]{I|L}VKEY;Y{M(Oxidation (M))|F}KV{I|L}[PG][DP]EY;[YE]{[ET]|[MV]}[PG]{I|L}VKEY;{[ET]|[MV]}[YE][PG]{I|L}VKEY;[{M(Oxidation (M))|F}V][{I|L}A][MD]{I|L}VKEY;{[TV]|[{I|L}S]}{[ET]|[MV]}[MD]{I|L}VKEY;[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E][PG]{I|L}VKEY;Y{M(Oxidation (M))|F}KV{I|L}[PG][YE][DP];[HV]{[HG]|PP}[MD]{I|L}VKEY;Y[RH]VT[MT]KEY 5.6746;5.2968;4.5234;4.2596;4.2527;4.2431;4.0695;3.8667;3.7791;3.7263 -;-;-;-;-;-;-;-;-;- 993 1 2.198 132034.2 0.6700000166893005 3687 3479 7154 DOHH2_400M_050219_1,7168 DOHH2_400M_050219_1,7168,EEFDRLVKEY True True EEFDRLVKEY 39.925105 664.3308 1002957.0625 7154.0 nc|ENSG00000092036|Q9H6D7-4|HAUS4;;ENSG00000092036|ENST00000541587|HAUS4;;nc|ENSG00000092036|Q9H6D7-2|HAUS4;;nc|ENSG00000092036|Q9H6D7-3|HAUS4 7.372049649556478 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7169 39.934 502.0 162790.0 25 0 7501.0 + 10339 FSEQVAMGY 9 146 516.2280328758601 1030.44151281852 2 516.2279540896416 MULTI CID FTMS 0 0 0 7154 112224.8984375 1.0 0 0.0 15 Unmodified _FSEQVAMGY_ ENSG00000179051|ENST00000375436|RCC2 11.640296217721598 0.521594087909532 1 {M(Oxidation (M))|F}GY 3 6 24.693 0.0 0.0 2.3963 0.0 0.0 645.3188454374639 0.0 645.3188454374639 0.0 9.798187706630152 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F}GY 2.3963 + + 400 + 1 2.198 67515.1 1.0 3688 3479 7154 DOHH2_400M_050219_1,7169 DOHH2_400M_050219_1,7169,FSEQVAMGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7170 39.946 688.0 233180.0 25 0 17938.0 + 41082 VNGVRVLSV 9 175 471.7903276025678 941.5661022719356 2 471.7902404665947 MULTI CID FTMS 0 0 0 7154 97287.5859375 1.0 0 0.0 16 Unmodified _VNGVRVLSV_ ENST00000461864.5_1_3:136561051-136561096:-|nuORF 59.36838082759317 0.0264317782606298 1 NVVG 4 6 40.404 0.0 0.0 4.2912 0.0 0.0 0.0 569.3432100885374 569.3432100885374 11.829261699803515 0.0 0.0 0.0 0 0.6203715150305281 0.8538719643217619 0.0 0.0 NVVG 4.2912 - 704 + 1 2.198 126318.9 1.0 3689 3479 7154 DOHH2_400M_050219_1,7170 DOHH2_400M_050219_1,7170,VNGVRVLSV True True VNGVRVLSV 39.945905 471.790240466595 585995.1875 7154.0 ENST00000461864.5_1_3:136561051-136561096:-|nuORF 5.851418654123942 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7171 39.961 800.0 276530.0 25 0 11280.0 -1 0 162 946.4340955766586 1890.853638220117 2 946.9384033083916 MULTI CID FTMS 0 0 0 7154 92521.859375 0.1812860331845281 -2 0.2565193176269531 17 1 [MN]PN{I|L}NEEQRGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]} 16 -1 + 104.31 0.0 0.0 5.5164 5.5164 84.698 0.0 0.0 0.0 37.80329390201744 1.5723553956368477 1.5723553956368477 9.013902021140495 0 2.603917193908117 1.5228787452803376 0.6307196863200843 2.00552339309072 [MN]PN{I|L}NEEQRGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEEQ[VG]GD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PGG{I|L}NEEQRGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}GGEEQRGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEE[AG]RGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[NP]{I|L}NEE[RP]EEN{I|L}D[WH];[MN]PN{I|L}NEEQRGD{M(Oxidation (M))|F}K{[CP]|[EA]};[NP]{I|L}NEE[RP]EEN{I|L}HG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NEEVWPEN{I|L}D[WH];[NP]{I|L}NEE[RP]EEN{I|L}HS[DV] 5.5164;5.0396;5.0396;5.0396;5.0396;4.8997;4.8644;4.842;4.6889;4.6723 -;-;-;-;-;-;-;-;-;- 37768 + 1 2.198 143674.7 0.5699999928474426 3690 3479 7154 DOHH2_400M_050219_1,7171 DOHH2_400M_050219_1,7171, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7172 39.972 633.0 193630.0 25 0 12724.0 + 4783 DEMVSLKDY 9 162 550.2511576362504 0 550.2521240115166 PEAK CID FTMS 0 0 0 7154 84108.421875 0.8806862722882781 -1 0.1419296264648437 18 Unmodified _DEMVSLKDY_ ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 28.49450938151212 0.124065572374239 1 MVS{I|L}K 5 4 23.672 0.0 0.0 2.155 0.0 0.0 244.06269027246304 293.07859216861567 537.1412824410787 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 + MVS{I|L}K 2.155 + + 291 + 1 2.198 97131.1 1.0 3691 3479 7154 DOHH2_400M_050219_1,7172 DOHH2_400M_050219_1,7172,DEMVSLKDY True True DEMVSLKDY 39.972249 550.252124011517 743492.0 7154.0 ENST00000530115.1_1_11:27910903-27911533:-|nuORF;;nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1 6.794178326924642 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7173 39.974 101.0 551090.0 25 0 49292.0 + 29130 QETPLPRSW 9 85 557.2883694490944 1112.5621859649889 2 557.2876464724541 MULTI CID FTMS 0 0 0 7154 194387.578125 0.559654499587439 -1 0.1419296264648437 19 Unmodified _QETPLPRSW_ ENSG00000010017|ENST00000011619|RANBP9;ENSG00000141084|ENST00000317506|RANBP10;ENST00000602525.5_1_16:67765330-67840439:-|nuORF;nc|ENSG00000141084|Q6VN20-3|RANBP10 43.77239144664712 0.0547478964384323 1 {[DA]|[EG]}AT 4 8 30.355 0.0 0.0 2.7283 0.0 0.0 0.0 751.3903469359449 751.3903469359449 8.136087843045061 0.0 0.0 0.0 0 1.0 0.7958800173440752 1.0 0.0 {[DA]|[EG]}AT 2.7283 - 170 1 2.198 48688.3 1.0 3692 3479 7154 DOHH2_400M_050219_1,7173 DOHH2_400M_050219_1,7173,QETPLPRSW True True QETPLPRSW 39.974426 557.287646472454 2891608.25 7154.0 ENSG00000010017|ENST00000011619|RANBP9;;ENST00000602525.5_1_16:67765330-67840439:-|nuORF;;ENSG00000141084|ENST00000317506|RANBP10;;nc|ENSG00000141084|Q6VN20-3|RANBP10 6.878222624460856 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7174 39.989 800.0 62175.0 25 0 3950.5 + 10340 FSEQVAMGY 9 79 1031.450072032817 1030.442795566217 1 1031.449999988079 MULTI CID FTMS 0 0 0 7154 167291.359375 1.0 0 0.0 20 Unmodified _FSEQVAMGY_ ENSG00000179051|ENST00000375436|RCC2 60.07390631473393 0.0260411565414776 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{M(Oxidation (M))|F}VAMGY 9 4 + 81.983 0.0 0.0 7.9561 7.9561 83.817 0.0 0.0 0.0 4.648167490521175 10.0 4.648167490521175 1.7031030934389833 0 0.3252574989159953 0.0 2.423877368056628 0.2887254899964357 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{M(Oxidation (M))|F}VAMGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SV{M(Oxidation (M))|F}AMGY;{[ES]|[DT]|[{I|L}C]}Q{M(Oxidation (M))|F}VAMGY;{[ES]|[DT]|[{I|L}C]}QV{M(Oxidation (M))|F}AMGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SVA{M(Oxidation (M))|F}MGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{M(Oxidation (M))|F}VCVGY;{[ES]|[DT]|[{I|L}C]}QVA{M(Oxidation (M))|F}MGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SV{M(Oxidation (M))|F}CVGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{M(Oxidation (M))|F}AVMGY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}QVAMGY 7.9561;7.7908;7.505;7.3397;7.1881;6.8079;6.737;6.6426;6.5512;6.4837 -;-;-;-;-;-;-;-;-;- 2614 1 2.198 40072.2 0.6899999976158142 3693 3479 7154 DOHH2_400M_050219_1,7174 DOHH2_400M_050219_1,7174,FSEQVAMGY True True FSEQVAMGY 39.989463 1031.44999998808 1635068.0 7154.0 ENSG00000179051|ENST00000375436|RCC2 5.841487725575765 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7176 39.995 57.0 842390.0 25 0 141570.0 + 44114 YLDDPDLKY 9 72 571.2742747343118 1140.5339965354235 2 571.2746459841728 MULTI CID FTMS 0 0 0 7175 531206.125 0.0663096809894508 2 -0.2308540344238281 1 Unmodified _YLDDPDLKY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 27.628801355627647 0.1796483985696185 1 Y{I|L}DD[DP]{I|L}KY 9 0 + 59.332 0.0 0.0 5.2021 5.2021 90.298 0.0 0.0 0.0 44.63878728569696 14.09256854528806 14.09256854528806 59.331524890260994 0 0.6989700043360187 2.0 0.0 0.0 + + Y{I|L}DD[DP]{I|L}KY 5.2021 + + 59 + 1 2.207 40706.9 1.0 3694 3480 7175 DOHH2_400M_050219_1,7176 DOHH2_400M_050219_1,7176,YLDDPDLKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7177 40.001 340.0 257000.0 25 0 12874.0 + 42202 VSERDVYLTY 10 109 622.8116581490117 1243.6087633648233 2 622.8117553591728 MULTI CID FTMS 0 0 0 7175 192963.8125 0.1125665390089953 2 -0.2308540344238281 2 Unmodified _VSERDVYLTY_ ENSG00000170638|ENST00000380909|TRABD;ENST00000463233.1_1_22:50624392-50636456:+|nuORF;ENST00000472677.1_1_22:50636123-50636456:+|nuORF;nc|ENSG00000170638|Q9H4I3-2|TRABD 30.7034409873982 0.2788461460996952 1 [{I|L}T]YPG[PG]Y{I|L}TY 11 7 + 64.429 0.0 0.0 5.1808 5.1808 76.528 0.0 0.0 0.0 7.513487579716759 16.575773191777927 7.513487579716759 1.8045606445813007 0 0.5 1.2218487496163564 0.6989700043360187 0.0 [{I|L}T]YPG[PG]Y{I|L}TY;[{I|L}T]YP[NP]Y{I|L}TY;[{I|L}T]YM{I|L}[QA]{I|L}EY;[{I|L}T]YMNVV{I|L}EY;[YT]{I|L}PG[PG]Y{I|L}TY;[YT]{I|L}P[NP]Y{I|L}TY;[{I|L}T]YP{M(Oxidation (M))|F}[QA]{I|L}EY;[YT]{I|L}M{I|L}[QA]{I|L}EY;[YT]{I|L}MNVV{I|L}EY;[{I|L}T]YMGGVV{I|L}EY 5.1808;5.0357;4.7151;4.6596;4.5767;4.4315;4.1531;4.111;4.0554;3.9226 -;-;-;-;-;-;-;-;-;- 2025 1 2.207 68822.0 1.0 3695 3480 7175 DOHH2_400M_050219_1,7177 DOHH2_400M_050219_1,7177,VSERDVYLTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7178 40.002 41.0 1454800.0 25 0 135230.0 + 2681 ATDRWYDEY 9 61 609.7570042662497 1217.4994555992994 2 609.7571288943291 MULTI CID FTMS 0 0 0 7175 1396734.75 1.0 0 0.0 3 Unmodified _ATDRWYDEY_ ENSG00000139197|ENST00000675855|PEX5;ENST00000539304.1_1_12:7344181-7354515:+|nuORF;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5 28.49450938151212 0.1686335738423394 1 [TA][RD]WYDEY 9 0 + 55.384 0.0 0.0 4.549 4.549 84.862 0.0 0.0 0.0 11.940381874714348 35.850935420268115 11.940381874714348 12.786144654057663 0 0.8494850021680094 1.2218487496163564 0.4247425010840047 0.0 + + [TA][RD]WYDEY;{[ES]|[DT]|[{I|L}C]}{[QV]|[N{I|L}]|[RA]|[KV]}WYDEY;[YE]D[WR]SAEY;{[YD]|[{M(Oxidation (M))|F}M]}[WR]DTAEY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y[WR]SAEY;{[ES]|[DT]|[{I|L}C]}{[QV]|[N{I|L}]|[RA]|[KV]}{[DA]|[EG]}YDEY;[PA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WYDEY;{[YD]|[{M(Oxidation (M))|F}M]}[WR]ESAEY;{[YD]|[{M(Oxidation (M))|F}M]}E[WR]SAEY;[YE]D[WR]SEAY 4.549;3.4988;3.1489;2.9017;2.9017;2.7425;2.7285;2.6544;2.6544;2.5528 +;-;-;-;-;-;-;-;-;- + 432 1 2.207 48504.0 1.0 3696 3480 7175 DOHH2_400M_050219_1,7178 DOHH2_400M_050219_1,7178,ATDRWYDEY False True ATDRWYDEY 40.002132 609.757128894329 7738932.5 7175.0 ENSG00000139197|ENST00000675855|PEX5;;nc|ENSG00000139197|P50542-3|PEX5;;ENST00000539304.1_1_12:7344181-7354515:+|nuORF;;nc|ENSG00000139197|P50542-2|PEX5;;nc|ENSG00000139197|P50542-4|PEX5 8.515270392100016 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7179 40.004 105.0 454640.0 25 0 41402.0 + 23368 LTDLVDDNY 9 82 534.2484848227924 1066.4824167123847 2 534.2482177615166 MULTI CID FTMS 0 0 0 7175 376754.0625 0.6640664288406184 -1 0.1235618591308593 4 Unmodified _LTDLVDDNY_ ENSG00000174231|ENST00000304992|PRPF8 34.10243960390752 0.1078313939113124 1 [{I|L}T]D{I|L}V 5 4 32.193 0.0 0.0 3.0186 0.0 0.0 0.0 522.147735886466 522.147735886466 15.739087409443188 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.5994850021680094 0.0 + [{I|L}T]D{I|L}V 3.0186 + + 117 1 2.207 41183.1 1.0 3697 3480 7175 DOHH2_400M_050219_1,7179 DOHH2_400M_050219_1,7179,LTDLVDDNY True True LTDLVDDNY 40.004376 534.248217761517 3118000.0 7175.0 ENSG00000174231|ENST00000304992|PRPF8 5.029425303141276 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7180 40.007 116.0 469040.0 25 0 87301.0 -1 0 79 479.27838575818873 478.2711092915888 1 479.2774230837822 MULTI CID FTMS 0 0 0 7175 359019.96875 0.598277932343987 3 -0.3383827209472656 5 1 {I|L} 1 -1 9.9148 0.0 0.0 2.0731 0.0 0.0 347.1761823890481 0.0 347.1761823890481 0.0 9.914833303506096 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.0731 - 1 + 1 2.207 45819.6 1.0 3698 3480 7175 DOHH2_400M_050219_1,7180 DOHH2_400M_050219_1,7180, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7181 40.01 192.0 459810.0 25 0 35713.0 + 7248 EESLNIVKY 9 102 547.7906868794009 1093.5668208256018 2 547.7904540896416 MULTI CID FTMS 0 0 0 7175 334827.40625 0.5482970133011118 -1 0.1235618591308593 6 Unmodified _EESLNIVKY_ ENSG00000122674|ENST00000325974|CCZ1;ENSG00000146574|ENST00000316731|CCZ1B;ENST00000490178.1_1_7:6854391-6861977:-|nuORF 68.08070601005525 0.0218408846571049 1 EES{I|L}N{I|L}VKY 9 0 + 80.186 0.0 0.0 7.3325 7.3325 91.562 0.0 0.0 0.0 50.879231027444405 12.98332479720628 12.98332479720628 9.208187539523747 0 0.5501648626366046 2.0 0.0 0.7059771852360797 + + EES{I|L}N{I|L}VKY;EES{I|L}GG{I|L}VKY;EE[WK]{I|L}VKY;EES{I|L}[K{I|L}]{[NV]|[RG]}Y;{[TV]|[{I|L}S]}[KA][HV]{I|L}S[HC];[KA]{[TV]|[{I|L}S]}[HV]{I|L}S[HC] 7.3325;6.4905;4.7136;4.1564;2.0405;0.88861 +;-;-;-;-;- + 303 + 1 2.207 73840.0 1.0 3699 3480 7175 DOHH2_400M_050219_1,7181 DOHH2_400M_050219_1,7181,EESLNIVKY True True EESLNIVKY 40.01049 547.790454089642 3233598.75 7175.0 ENSG00000146574|ENST00000316731|CCZ1B;;ENST00000490178.1_1_7:6854391-6861977:-|nuORF;;ENSG00000122674|ENST00000325974|CCZ1 6.993760903676351 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7182 40.013 148.0 597660.0 25 0 64807.0 + 25055 MPVEKNITL 9 116 522.7918696269584 1043.5691863207169 2 522.7920410037041 MULTI CID FTMS 0 0 0 7175 320525.71875 0.561515688220876 -1 0.1235618591308593 7 Unmodified _MPVEKNITL_ ENSG00000170571|ENST00000303221|EMB;ENST00000505896.5_1_5:49695109-49707239:-|nuORF;nc|ENSG00000170571|Q6PCB8-2|EMB 57.72198328787511 0.0273433238377839 1 MPV[{I|L}V][SG]QT{I|L} 10 5 + 54.839 0.0 0.0 5.255 5.255 74.345 0.0 0.0 0.0 8.926178642403748 0.1312440910856693 0.1312440910856693 0.1312440910856693 0 1.174742501084005 1.5228787452803376 0.9269359821608808 0.0 MPV[{I|L}V][SG]QT{I|L};[VP]EKN{I|L}T{I|L}M;[VP]EKN{I|L}MT{I|L};[VP]EKGG{I|L}T{I|L}M;[VP]T[VG]N{I|L}T{I|L}M;[VP]EKGG{I|L}MT{I|L};[VP]EK[KA]E{I|L}M;{[TV]|[{I|L}S]}G[VP]N{I|L}T{I|L}M;[VP]T[VG]N{I|L}MT{I|L};[VP]EKNM{I|L}T{I|L} 5.255;5.2424;4.3996;4.36;4.1474;3.5172;3.4072;3.3221;3.3047;3.2891 -;-;-;-;-;-;-;-;-;- 601 + 1 2.207 73134.2 1.0 3700 3480 7175 DOHH2_400M_050219_1,7182 DOHH2_400M_050219_1,7182,MPVEKNITL True True MPVEKNITL 40.013448 522.792041003704 3475417.0 7175.0 nc|ENSG00000170571|Q6PCB8-2|EMB;;ENST00000505896.5_1_5:49695109-49707239:-|nuORF;;ENSG00000170571|ENST00000303221|EMB 7.102220058441162 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7183 40.016 121.0 519300.0 25 0 34203.0 + -1 STELECGSMPF 11 92 637.2568456125232 1272.4991382918463 2 637.2568237185478 MULTI CID FTMS 0 0 0 7175 270138.875 1.0 0 0.0 8 Carbamidomethyl (C),Oxidation (M) _STELEC(Carbamidomethyl (C))GSM(Oxidation (M))PF_ REV__nc|ENSG00000181798|Q8N535|LINC00471 17.11289562659939 0.6791789249425932 1 {[MG]|[TS]}E 3 -1 19.309 0.0 0.0 1.5174 0.0 0.0 0.0 952.3538190381933 952.3538190381933 2.998037644757048 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.0 0.0 {[MG]|[TS]}E 1.5174 + + 219 1 2.207 51339.6 1.0 3701 3480 7175 DOHH2_400M_050219_1,7183 DOHH2_400M_050219_1,7183,STELECGSMPF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7184 40.02 217.0 444300.0 25 0 49639.0 + 10541 FVDPYPVNKY 10 109 621.3144062680038 1240.6142596028076 2 621.3149902224541 MULTI CID FTMS 0 0 0 7175 240727.515625 0.7708058725604002 -1 0.1235618591308593 9 Unmodified _FVDPYPVNKY_ ENSG00000174010|ENST00000328046|KLHL15 71.92227651296345 0.0188747003512554 1 [{M(Oxidation (M))|F}V]DPYPT[KQ]{M(Oxidation (M))|F} 10 3 + 49.407 0.0 0.0 3.9824 3.9824 76.536 0.0 0.0 0.0 21.42824368007185 4.031600362424776 4.031600362424776 5.3173321790116646 0 1.2302046884880935 0.0 0.75 0.805462187404089 [{M(Oxidation (M))|F}V]DPYPT[KQ]{M(Oxidation (M))|F};[VP]NKMG[VG]PD{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]DPYPT[KA]G{M(Oxidation (M))|F};[DP]V[RP]{[MS]|[{M(Oxidation (M))|F}A]}PD{NN|[MP]|[D{I|L}]|[EV]};[VP]NKMG[RP]D{NN|[MP]|[D{I|L}]|[EV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T[HK][VG]PD{NN|[MP]|[D{I|L}]|[EV]};[VP]D[RP]{[MS]|[{M(Oxidation (M))|F}A]}PD{NN|[MP]|[D{I|L}]|[EV]};[VP]NKYPDY[{M(Oxidation (M))|F}V];[{M(Oxidation (M))|F}V]DP{[RE]|[WV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}G{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TP[PA][RP]D{NN|[MP]|[D{I|L}]|[EV]} 3.9824;3.5538;3.5007;2.9046;2.7747;2.7505;2.5838;2.3835;2.2866;2.2801 -;-;-;-;-;-;-;-;-;- 1738 + 1 2.207 74605.2 1.0 3702 3480 7175 DOHH2_400M_050219_1,7184 DOHH2_400M_050219_1,7184,FVDPYPVNKY True True FVDPYPVNKY 40.020094 621.314990222454 3718630.0 7175.0 ENSG00000174010|ENST00000328046|KLHL15 8.465360164642334 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7185 40.024 222.0 424860.0 25 0 32321.0 + 637 AELELQKQL 9 119 536.3057882082413 1070.5970234832826 2 536.3058349490166 MULTI CID FTMS 0 0 0 7175 236155.171875 0.985401272825568 -1 0.1235618591308593 10 Unmodified _AELELQKQL_ ENSG00000175467|ENST00000312397|SART1 96.36657018975838 0.0123932121270252 1 {[CP]|[EA]}{I|L}E{I|L}QKQ{I|L} 9 0 + 77.89 0.0 0.0 7.2754 7.2754 91.455 0.0 0.0 0.0 14.137850625844798 4.202650797575416 4.202650797575416 9.208187539523747 0 2.579689690656103 0.0 0.5 1.774227503252014 + + {[CP]|[EA]}{I|L}E{I|L}QKQ{I|L};{[CP]|[EA]}{I|L}E{I|L}[AG]KQ{I|L};{[CP]|[EA]}{I|L}E{I|L}QKAG{I|L};{[QN]|[E{I|L}]|[KN]}AE{I|L}A{I|L}{[CP]|[EA]}{I|L};{[QN]|[E{I|L}]|[KN]}AE{I|L}AGKQ{I|L};{[QN]|[E{I|L}]|[KN]}AGKGA{I|L}{[CP]|[EA]}{I|L};{[QN]|[E{I|L}]|[KN]}AGK{I|L}Q{[CP]|[EA]}{I|L};{[QN]|[E{I|L}]|[KN]}AGKQ{I|L}{[CP]|[EA]}{I|L};{[QN]|[E{I|L}]|[KN]}AE{I|L}QKQ{I|L};{[CP]|[EA]}{I|L}E{I|L}[AG]KAG{I|L} 7.2754;6.4153;6.3395;6.0111;5.998;5.8287;5.709;5.5857;5.5071;5.4835 +;-;-;-;-;-;-;-;-;- + 1223 + 1 2.207 74525.7 1.0 3703 3480 7175 DOHH2_400M_050219_1,7185 DOHH2_400M_050219_1,7185,AELELQKQL True True AELELQKQL 40.024286 536.3068 1420985.25 7175.0 ENSG00000175467|ENST00000312397|SART1 5.129258473714192 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7186 40.028 205.0 508530.0 25 0 44339.0 + 8363 ESDGKSRWFY 10 108 425.53164097071055 1273.5730935123318 3 425.5314514040947 MULTI CID FTMS 0 0 0 7175 217189.203125 0.5664032518300386 -1 0.1235618591308593 11 Unmodified _ESDGKSRWFY_ ENSG00000146476|ENST00000367294|ARMT1 17.04857598603903 0.5614834650426465 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L} 3 9 18.161 0.0 0.0 1.426 0.0 0.0 0.0 863.3616121493036 863.3616121493036 3.55651869704872 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L} 1.426 - 266 1 2.207 88528.7 1.0 3704 3480 7175 DOHH2_400M_050219_1,7186 DOHH2_400M_050219_1,7186,ESDGKSRWFY False True ESDGKSRWFY 40.028184 425.531451404095 2288026.0 7175.0 ENSG00000146476|ENST00000367294|ARMT1 5.26067574818929 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7187 40.035 372.0 228260.0 25 0 22929.0 -1 0 94 603.967411717614 1808.880405753042 3 604.3010131716728 MULTI CID FTMS 0 0 0 7175 219372.75 0.106229417460954 5 -0.5560493469238281 12 1 {I|L}Q 2 -1 32.078 0.0 0.0 1.7734 0.0 0.0 1549.7273428641731 0.0 1549.7273428641731 0.0 10.20635624875105 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.4247425010840047 {I|L}Q 1.7734 - 308 + 1 2.207 69523.1 1.0 3705 3480 7175 DOHH2_400M_050219_1,7187 DOHH2_400M_050219_1,7187, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7188 40.039 239.0 264510.0 25 0 44597.0 16042 ITKGTELQI 9 90 501.7946599745563 1001.5747670159126 2 501.2902404665947 MULTI CID FTMS 0 0 0 7175 170658.328125 0.2149494054385276 -7 0.7896842956542969 13 Unmodified _ITKGTELQI_ ENSG00000174718|ENST00000312561|RESF1 10.073929032068715 0.563993802247229 1 {I|L} 1 8 11.109 0.0 0.0 1.1092 0.0 0.0 870.4799164073173 0.0 870.4799164073173 0.0 8.890756251918218 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1092 + + 40 + 1 2.207 51926.9 1.0 3706 3480 7175 DOHH2_400M_050219_1,7188 DOHH2_400M_050219_1,7188,ITKGTELQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7189 40.046 379.0 200860.0 25 0 18361.0 + 34095 SLLKEKAIL 9 114 507.8326827587962 1013.6508125843924 2 507.8327819705009 MULTI CID FTMS 0 0 0 7175 152708.953125 1.0 0 0.0 14 Unmodified _SLLKEKAIL_ ENSG00000164022|ENST00000672341|AIMP1;nc|ENSG00000164022|Q12904-2|AIMP1 47.594388314883695 0.0456443387682827 1 {[TV]|[{I|L}S]}{I|L}KQ{I|L}S{I|L}{I|L} 9 3 + 55.366 0.0 0.0 5.462 5.462 75.601 0.0 0.0 0.0 20.737862141609185 36.94415285812511 20.737862141609185 0.4575749056067479 0 1.492992819099939 2.0 0.7302046884880937 0.0 {[TV]|[{I|L}S]}{I|L}KQ{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}KGA{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}Q[K{I|L}]{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}[AG][K{I|L}]{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}KG{[TV]|[{I|L}S]}A{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T[K{I|L}]{I|L}S{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}KKA{I|L}S{I|L}{I|L};[{I|L}A][SG][K{I|L}]{I|L}S{I|L}{I|L};[KA]K{[QN]|[E{I|L}]|[KN]}{I|L}S{I|L}{I|L};[KA]E[K{I|L}]{I|L}S{I|L}{I|L} 5.462;5.4169;4.5753;3.6669;2.9253;2.4241;1.8983;1.6169;1.5661;1.2187 -;-;-;-;-;-;-;-;-;- 317 1 2.207 59668.9 1.0 3707 3480 7175 DOHH2_400M_050219_1,7189 DOHH2_400M_050219_1,7189,SLLKEKAIL True True SLLKEKAIL 40.046153 507.832781970501 571039.5 7175.0 nc|ENSG00000164022|Q12904-2|AIMP1;;ENSG00000164022|ENST00000672341|AIMP1 1.4714950323104858 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7190 40.053 380.0 250230.0 25 0 16920.0 + 22342 LPSPLKQTI 9 143 498.80742829702274 995.6003036608456 2 498.8078491091728 MULTI CID FTMS 0 0 0 7175 146304.84375 1.0 0 0.0 15 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 47.594388314883695 0.0456443387682827 1 {I|L}PSP{I|L}[KQ]T{I|L} 9 0 + 65.628 0.0 0.0 6.5918 6.5918 83.891 0.0 0.0 0.0 17.959313474760876 3.776423530973105 3.776423530973105 3.776423530973105 0 1.4049471895720984 1.5228787452803376 0.4957416651753049 0.0 + + {I|L}PSP{I|L}[KQ]T{I|L};{I|L}PSP{I|L}[RK]W 6.5918;6.2125 +;- + 1050 + 1 2.207 75409.2 1.0 3708 3480 7175 DOHH2_400M_050219_1,7190 DOHH2_400M_050219_1,7190,LPSPLKQTI True True LPSPLKQTI 40.052971 498.807849109173 1352631.875 7175.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 2.385476509730021 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7191 40.06 313.0 245080.0 25 0 32998.0 + 17500 KPGSLMKTL 9 120 487.7904846398097 973.5664163464194 2 487.7908508181572 MULTI CID FTMS 0 0 0 7175 145740.484375 0.5222241954965972 3 -0.3383827209472656 16 Unmodified _KPGSLMKTL_ REV__ENST00000409331.6_1_2:85584249-85584309:+|nuORF 9.38312468134398 0.5871240394367778 1 {I|L} 1 -1 11.99 0.0 0.0 1.2315 0.0 0.0 842.471535220246 0.0 842.471535220246 0.0 0.8187876199097825 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2315 + + 48 + 1 2.207 59814.8 1.0 3709 3480 7175 DOHH2_400M_050219_1,7191 DOHH2_400M_050219_1,7191,KPGSLMKTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7192 40.062 96.0 501430.0 25 0 26655.0 + 5343 DLHEKDFSL 9 88 552.2725036505606 1102.530454367921 2 552.2715942263603 MULTI CID FTMS 0 0 0 7175 127467.796875 0.2037696263989096 -1 0.1235618591308593 17 Unmodified _DLHEKDFSL_ ENSG00000102699|ENST00000381989|PARP4 38.17557092003332 0.0854718145212029 1 {NN|[MP]|[D{I|L}]|[EV]}HE{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}C{I|L} 9 2 + 51.436 0.0 0.0 4.6653 4.6653 85.571 0.0 0.0 0.0 10.739860381413637 3.689032153388396 3.689032153388396 13.634541343817752 0 0.5 2.0 0.805462187404089 0.0 {NN|[MP]|[D{I|L}]|[EV]}HE{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}C{I|L};[{M(Oxidation (M))|F}V]{I|L}S[YQ]{M(Oxidation (M))|F}S{I|L};[{M(Oxidation (M))|F}V]{I|L}SN[Y{M(Oxidation (M))|F}]T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}E{M(Oxidation (M))|F}S{I|L};[{M(Oxidation (M))|F}V]{I|L}S{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}C{I|L};{[TV]|[{I|L}S]}[DV]QN{NN|[MP]|[D{I|L}]|[EV]}S{I|L};[{M(Oxidation (M))|F}V]{I|L}SGG[Y{M(Oxidation (M))|F}]T{I|L};[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}C{I|L};{[YC]|[HE]}V[YQ]S{I|L}D{I|L};{[TV]|[{I|L}S]}[DV]Q[WQ]D{I|L} 4.6653;3.4286;2.8362;2.6915;2.6621;2.3342;2.001;1.961;1.7239;1.6295 -;-;-;-;-;-;-;-;-;- 361 + 1 2.207 42237.9 1.0 3710 3480 7175 DOHH2_400M_050219_1,7192 DOHH2_400M_050219_1,7192,DLHEKDFSL True True DLHEKDFSL 40.061942 552.27159422636 6631788.0 7175.0 ENSG00000102699|ENST00000381989|PARP4 7.110217889149983 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7193 40.076 800.0 102000.0 25 0 8136.6 + 35082 SQVEGEHQLW 10 131 606.7862693261408 1211.5579857190814 2 606.7863647341728 MULTI CID FTMS 0 0 0 7175 103783.6796875 1.0 0 0.0 18 Unmodified _SQVEGEHQLW_ ENSG00000117724|ENST00000366955|CENPF 49.52724829834842 0.0829255630816734 1 {[QS]|[NT]}V[YK]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}W 9 4 + 50.224 0.0 0.0 4.1454 4.1454 82.944 0.0 0.0 0.0 11.108859046888815 30.620085702574222 11.108859046888815 10.969100130080562 0 1.3494850021680094 0.8538719643217619 0.4829535345634596 0.9258337024346172 {[QS]|[NT]}V[YK]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}W;{[QS]|[NT]}V[YK][C(Carbamidomethyl (C))N]Q[VS];{[QS]|[NT]}V[YK][C(Carbamidomethyl (C))N]K{[DA]|[EG]};[HQ]{[DA]|[EG]}E{I|L}WKW;[HQ]{[DA]|[EG]}EV{I|L}{[QS]|[NT]}W;{[QS]|[NT]}V{[CT]|[{M(Oxidation (M))|F}G]}EH[YV]{M(Oxidation (M))|F};[HQ][WE]{I|L}WQW;[Q{I|L}]{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}SWQW;[Q{I|L}]{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}SWKW;[HQ]{[DA]|[EG]}E{I|L}V{[QS]|[NT]}W 4.1454;3.24;3.24;2.4014;2.2579;2.1457;2.1152;2.0445;2.0445;2.0352 -;-;-;-;-;-;-;-;-;- 780 1 2.207 62761.7 0.5299999713897705 3711 3480 7175 DOHH2_400M_050219_1,7193 DOHH2_400M_050219_1,7193,SQVEGEHQLW True True SQVEGEHQLW 40.075773 606.786364734173 637288.5 7175.0 ENSG00000117724|ENST00000366955|CENPF 6.64285929997762 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7194 40.09 800.0 90594.0 25 0 6848.3 + 18975 LDFEEECEW 9 121 600.233938804014 1198.453324674828 2 600.2345458865166 MULTI CID FTMS 0 0 0 7175 100589.03125 1.0 0 0.0 19 Unmodified _LDFEEECEW_ ENSG00000186448|ENST00000344387|ZNF197 4.75600775471527 0.7486543447549536 1 [H{I|L}]{[WT]|[RM]}VY 6 8 16.004 0.0 0.0 1.3354 0.0 0.0 0.0 396.0203772473466 396.0203772473466 -0.1401436180012218 0.0 -0.1401436180012218 0.0 0 0.0 1.3010299956639813 0.3494850021680094 0.0 [H{I|L}]{[WT]|[RM]}VY 1.3354 - 263 1 2.207 54298.0 0.5400000214576721 3712 3480 7175 DOHH2_400M_050219_1,7194 DOHH2_400M_050219_1,7194,LDFEEECEW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7195 40.105 800.0 149230.0 25 0 11180.0 12423 GTQTHPLTL 9 169 484.2656478638632 966.5167427945264 2 484.2680847048759 MULTI CID FTMS 0 0 0 7175 103323.359375 1.0 0 0.0 20 Unmodified _GTQTHPLTL_ ENSG00000187689|ENST00000339336|AMTN;nc|ENSG00000187689|Q6UX39-2|AMTN 14.838274106304384 0.4350285940865338 1 [{I|L}T][R{I|L}]AP[C(Carbamidomethyl (C))H] 8 7 + 19.983 0.0 0.0 2.0675 2.0675 78.933 0.0 0.0 0.0 5.546218740408907 6.884249941294062 5.546218740408907 13.15044357464103 0 0.0 1.3979400086720375 0.1109243748081781 0.0 [{I|L}T][R{I|L}]AP[C(Carbamidomethyl (C))H];[WE]PA[R{I|L}]VP;[{I|L}T][{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))H];[{I|L}T][VP][Q{I|L}][C(Carbamidomethyl (C))H] 2.0675;0.70695;0.16663;0.12753 -;-;-;- 209 1 2.207 94965.6 0.4600000083446502 3713 3480 7175 DOHH2_400M_050219_1,7195 DOHH2_400M_050219_1,7195,GTQTHPLTL False True GEEPPRGIL 40.104594 483.7671 820007.5625 7175.0 ENST00000381222.8_2_X:2408500-2408650:-|nuORF 0.8441663881142935 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7197 40.11 36.0 1390300.0 25 0 328370.0 + 40686 VLFPPPML 8 71 457.2644018435216 912.5142507538432 2 457.2644225955009 MULTI CID FTMS 0 0 0 7196 1439688.375 0.8707166324276978 4 -0.4409027099609375 1 Unmodified _VLFPPPML_ REV__ENSG00000146247|ENST00000275034|PHIP;REV__ENSG00000165288|ENST00000373275|BRWD3;REV__ENSG00000185658|ENST00000342449|BRWD1;REV__nc|ENSG00000165288|Q6RI45-2|BRWD3;REV__nc|ENSG00000165288|Q6RI45-3|BRWD3;REV__nc|ENSG00000165288|Q6RI45-4|BRWD3;REV__nc|ENSG00000165288|Q6RI45-5|BRWD3;REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1;REV__nc|ENSG00000185658|Q9NSI6|BRWD1 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.217 44779.5 1.0 3714 3481 7196 DOHH2_400M_050219_1,7197 DOHH2_400M_050219_1,7197,VLFPPPML False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7198 40.111 71.0 450140.0 25 0 37167.0 8597 EVAHGKDHPY 10 63 576.7763716161812 1151.5381902991624 2 576.7765991091728 MULTI CID FTMS 0 0 0 7196 294819.09375 0.1176860868068289 2 -0.223236083984375 2 Unmodified _EVAHGKDHPY_ ENSG00000143499|ENST00000366957|SMYD2;ENST00000491455.5_1_1:214507363-214510124:+|nuORF 8.745405648335112 0.6861838735306406 1 {NN|[MP]|[D{I|L}]|[EV]}[SG]AS 6 7 31.4 0.0 0.0 2.7268 0.0 0.0 0.0 618.2986544244749 618.2986544244749 15.255762612236904 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[SG]AS 2.7268 - 76 + 1 2.217 33172.7 1.0 3715 3481 7196 DOHH2_400M_050219_1,7198 DOHH2_400M_050219_1,7198,EVAHGKDHPY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7199 40.112 28.0 1728000.0 25 0 151310.0 + 486 AEGIHTGQFVY 11 69 611.2988601410459 1220.5831673488915 2 611.2989990115166 MULTI CID FTMS 0 0 0 7196 1140170.5 1.0 0 0.0 3 Unmodified _AEGIHTGQFVY_ ENSG00000161016|ENST00000528957|RPL8;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;ENST00000531767.1_1_8:146017155-146017514:-|nuORF 34.93206674587334 0.2904649469012649 1 V{M(Oxidation (M))|F}{[QG]|[NA]}TA[TP]GY 10 8 37.484 0.0 0.0 3.071 0.0 0.0 181.0793354170542 0.0 181.0793354170542 0.0 27.15472540108173 0.0 0.0 0 0.3494850021680094 0.0 0.7614393726401688 0.0 V{M(Oxidation (M))|F}{[QG]|[NA]}TA[TP]GY 3.071 - 216 + 1 2.217 44389.1 1.0 3716 3481 7196 DOHH2_400M_050219_1,7199 DOHH2_400M_050219_1,7199,AEGIHTGQFVY False True AEGIHTGQFVY 40.112423 611.298999011517 6415967.0 7196.0 ENST00000531767.1_1_8:146017155-146017514:-|nuORF;;ENSG00000161016|ENST00000528957|RPL8;;ENST00000525232.5_1_8:146017155-146017514:-|nuORF 6.112394650777181 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7200 40.114 54.0 1011500.0 25 0 195400.0 + 39241 VAAFAALT 8 81 382.2201137279208 762.4256745226417 2 382.2197448611259 MULTI CID FTMS 0 0 0 7196 1044372.375 0.3639137671602868 -1 0.1151466369628906 4 Unmodified _VAAFAALT_ REV__ENSG00000117600|ENST00000370185|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-3|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5|PLPPR4 0.0 0.8243325171867699 1 C(Carbamidomethyl (C)) 1 -1 5.4846 0.0 0.0 0.71936 0.0 0.0 514.3461895146323 85.03015314273671 599.376342657369 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.71936 - 4 + 1 2.217 47642.5 1.0 3717 3481 7196 DOHH2_400M_050219_1,7200 DOHH2_400M_050219_1,7200,VAAFAALT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7201 40.117 135.0 464580.0 25 0 26234.0 + 4721 DEDPENKIEF 10 94 618.2755788046571 1234.5366046761142 2 618.2750732302666 MULTI CID FTMS 0 0 0 7196 376978.46875 0.6470740540882676 -1 0.1151466369628906 5 Unmodified _DEDPENKIEF_ ENSG00000113141|ENST00000417647|IK;ENST00000434096.1_1_2:58688403-58689123:-|nuORF 73.1962812333195 0.0188336640735478 1 [EP]NK{I|L}EDDE{M(Oxidation (M))|F} 10 6 + 79.517 0.0 0.0 6.4411 6.4411 82.202 0.0 0.0 0.0 2.9527766677488927 16.53212513775344 2.9527766677488927 2.9527766677488927 0 0.7887254899964358 0.721246399047171 0.805462187404089 0.4247425010840047 [EP]NK{I|L}EDDE{M(Oxidation (M))|F};[DP]QK{I|L}EDDE{M(Oxidation (M))|F};[EP]NK{I|L}DEDE{M(Oxidation (M))|F};[DP]QK{I|L}DEDE{M(Oxidation (M))|F};[EP]GGK{I|L}EDDE{M(Oxidation (M))|F};[QP]DK{I|L}EDDE{M(Oxidation (M))|F};[EP]NKD{I|L}EDE{M(Oxidation (M))|F};[DP][AG]K{I|L}EDDE{M(Oxidation (M))|F};[EP]GGK{I|L}DEDE{M(Oxidation (M))|F};[QP]DK{I|L}DEDE{M(Oxidation (M))|F} 6.4411;6.2019;6.1972;5.958;5.6987;5.5917;5.4667;5.4595;5.4549;5.3478 -;-;-;-;-;-;-;-;-;- 479 1 2.217 52382.6 1.0 3718 3481 7196 DOHH2_400M_050219_1,7201 DOHH2_400M_050219_1,7201,DEDPENKIEF True True DEDPENKIEF 40.116558 618.275073230267 3778373.0 7196.0 ENST00000434096.1_1_2:58688403-58689123:-|nuORF;;ENSG00000113141|ENST00000417647|IK 7.454067230224609 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7202 40.119 110.0 445800.0 25 0 40340.0 + 45435 YTDKVVIGM 9 89 513.2701744902394 0 513.2702514529228 PEAK CID FTMS 0 0 0 7196 367001.15625 1.0 0 0.0 6 Unmodified _YTDKVVIGM_ ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1 41.95555342248728 0.0536712386667488 1 {I|L}VYTQE 6 8 33.595 0.0 0.0 3.2791 0.0 0.0 206.0748205607536 82.06687341861561 288.1416939793692 0.0 0.0 0.0 0.0 0 1.0 0.0 0.75 0.0 {I|L}VYTQE 3.2791 - 439 + 1 2.217 44220.6 1.0 3719 3481 7196 DOHH2_400M_050219_1,7202 DOHH2_400M_050219_1,7202,YTDKVVIGM True True YTDKVVIGM 40.118898 513.270251452923 1736770.625 7196.0 ENST00000464920.1_1_1:8921421-8930582:-|nuORF;;ENSG00000074800|ENST00000234590|ENO1;;nc|ENSG00000074800|P06733-2|ENO1 7.187478065490723 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7203 40.122 149.0 398240.0 25 0 42134.0 + -1 FVKGWGAEY 9 90 528.7612717743559 1055.5079906155115 2 528.7616454958916 MULTI CID FTMS 0 0 0 7196 184475.546875 0.7509961336510139 -1 0.1151466369628906 7 Carbamidomethyl (C) _VFNLC(Carbamidomethyl (C))LQY_ ENSG00000170365|ENST00000302085|SMAD1;nc|ENSG00000175387|Q15796-2|SMAD2;ENSG00000120693|ENST00000379826|SMAD9;nc|ENSG00000166949|P84022-4|SMAD3;nc|ENSG00000120693|O15198-2|SMAD9;nc|ENSG00000166949|P84022-2|SMAD3;ENSG00000166949|ENST00000327367|SMAD3;ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000166949|P84022-3|SMAD3;ENSG00000113658|ENST00000545279|SMAD5 20.871210003555333 0.6025813472596342 1 [AG]WGKEV{M(Oxidation (M))|F}Y 9 -1 + 35.868 0.0 0.0 3.3982 3.3982 73.011 0.0 0.0 0.0 3.511522916271062 9.577570906191898 3.511522916271062 3.511522916271062 0 0.3935078169319297 1.0457574905606752 0.3807196863200844 0.0 [AG]WGKEV{M(Oxidation (M))|F}Y;[WQ]GKEV{M(Oxidation (M))|F}Y;[AG]WGK[{M(Oxidation (M))|F}V]EY;[AG]WGK[Y{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V][RP]EV{M(Oxidation (M))|F}Y;[WQ]GK[{M(Oxidation (M))|F}V]EY;[WQ]GK[Y{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}M[RN]V{M(Oxidation (M))|F}Y;[AG]Y[YR][QA]{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V][RP][{M(Oxidation (M))|F}V]EY 3.3982;3.0655;1.8314;1.7668;1.7411;1.4987;1.4341;0.64314;0.27551;0.17432 -;-;-;-;-;-;-;-;-;- 127 1 2.217 51623.3 1.0 3720 3481 7196 DOHH2_400M_050219_1,7203 DOHH2_400M_050219_1,7203,VFNLCLQY False False FVKGWGAEY 40.121881 528.761645495892 1668903.375 7196.0 ENSG00000170365|ENST00000302085|SMAD1;;nc|ENSG00000175387|Q15796-2|SMAD2;;ENSG00000120693|ENST00000379826|SMAD9;;nc|ENSG00000166949|P84022-4|SMAD3;;nc|ENSG00000120693|O15198-2|SMAD9;;nc|ENSG00000166949|P84022-2|SMAD3;;ENSG00000166949|ENST00000327367|SMAD3;;ENSG00000175387|ENST00000262160|SMAD2;;nc|ENSG00000166949|P84022-3|SMAD3;;ENSG00000113658|ENST00000545279|SMAD5 4.680435061454773 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7204 40.136 800.0 104860.0 25 0 7974.7 -1 0 96 958.4428516976124 2872.306725693037 3 958.7767211794852 MULTI CID FTMS 0 0 0 7196 182591.546875 1.0 0 0.0 8 1 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WR]{[QD]|[EN]|[WG]|[KD]|[RS]} 7 -1 7.988 0.0 0.0 0.2781 0.0 0.0 1893.926073142775 0.0 1893.926073142775 0.0 -1.0531118146614888 -1.0531118146614888 0.0 0 0.5 0.0 0.0 0.4247425010840047 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WR]{[QD]|[EN]|[WG]|[KD]|[RS]} 0.2781 - 109 1 2.217 66106.1 0.7099999785423279 3721 3481 7196 DOHH2_400M_050219_1,7204 DOHH2_400M_050219_1,7204, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7205 40.15 800.0 218750.0 25 0 18547.0 + -1 TEVDNYHFY 9 165 594.254757407228 593.247480940628 1 594.2552368044853 MULTI CID FTMS 0 0 0 7196 154722.640625 1.0 0 0.0 9 nc|ENSG00000116044|Q16236-3|NFE2L2;ENSG00000116044|ENST00000397062|NFE2L2;nc|ENSG00000116044|Q16236-2|NFE2L2 1 {[{M(Oxidation (M))|F}H]|[RQ]}Y 3 -1 17.42 0.0 0.0 2.9364 0.0 0.0 0.0 143.03334454830295 143.03334454830295 5.430599746173222 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}Y 2.9364 - 161 1 2.217 133551.6 0.7099999785423279 3722 3481 7196 DOHH2_400M_050219_1,7205 DOHH2_400M_050219_1,7205, False False TEVDNYHFY 40.149562 594.255236804485 1012701.8125 7196.0 nc|ENSG00000116044|Q16236-3|NFE2L2;;ENSG00000116044|ENST00000397062|NFE2L2;;nc|ENSG00000116044|Q16236-2|NFE2L2 7.727442900339763 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7206 40.157 397.0 163650.0 25 0 8791.0 + 32702 SEAEQTLRF 9 104 540.7692689121055 1079.523984891011 2 540.7692138552666 MULTI CID FTMS 0 0 0 7196 120596.2734375 0.8716195522376935 1 -0.1157073974609375 10 Unmodified _SEAEQTLRF_ ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1 36.506200033944 0.094635877243972 1 {[ES]|[DT]|[{I|L}C]}AEQT{I|L}R{M(Oxidation (M))|F} 9 0 + 52.585 0.0 0.0 4.8712 4.8712 83.887 0.0 0.0 0.0 39.48638135581298 10.50234911887138 10.50234911887138 9.208187539523747 0 0.8494850021680094 0.0 0.4247425010840047 0.0 + + {[ES]|[DT]|[{I|L}C]}AEQT{I|L}R{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}AE[AG]T{I|L}R{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}AE[WR]R{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}A[RP]TYAW;{[ES]|[DT]|[{I|L}C]}A[RP]T{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}A[RP]T[HA][DP];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[Y{I|L}][{I|L}P][DP] 4.8712;4.0182;3.0918;2.2853;1.5864;1.2177;0.07864 +;-;-;-;-;-;- + 211 + 1 2.217 56600.5 1.0 3723 3481 7196 DOHH2_400M_050219_1,7206 DOHH2_400M_050219_1,7206,SEAEQTLRF True True SEAEQTLRF 40.156683 540.769213855267 626342.25 7196.0 nc|ENSG00000127603|O94854|MACF1;;ENSG00000127603|ENST00000564288|MACF1;;nc|ENSG00000127603|Q9UPN3-2|MACF1;;nc|ENSG00000127603|Q9UPN3|MACF1;;nc|ENSG00000127603|Q9UPN3-3|MACF1;;nc|ENSG00000127603|Q9UPN3-5|MACF1;;nc|ENSG00000127603|Q9UPN3-4|MACF1 6.624255498250325 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7207 40.162 264.0 320450.0 25 0 45109.0 + 13766 HSDPSILGY 9 107 494.7404145209297 987.4662761086596 2 494.7402526736259 MULTI CID FTMS 0 0 0 7196 113157.0859375 0.0772065307841763 -3 0.3806381225585937 11 Unmodified _HSDPSILGY_ ENSG00000146830|ENST00000678049|GIGYF1 67.34385681178166 0.0221257235307089 1 [HS]D[PS]{I|L}{I|L}GY 9 0 + 62.681 0.0 0.0 6.3477 6.3477 84.113 0.0 0.0 0.0 3.65279269351241 45.742946587693964 3.65279269351241 4.491369400291546 0 1.3807196863200843 0.0 1.6989700043360187 0.0 + + [HS]D[PS]{I|L}{I|L}GY;{[TV]|[{I|L}S]}[YC(Carbamidomethyl (C))]{I|L}{I|L}GY;[HS]D{I|L}[PS]{I|L}GY;{[TV]|[{I|L}S]}[HD][PS]{I|L}GY;{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AA{I|L}GY;[HT]{I|L}[PS][DV]GY;[PS]{M(Oxidation (M))|F}YAA{I|L}GY;[HT]{I|L}[QT][{M(Oxidation (M))|F}E]{I|L};[HT]{I|L}AA[{M(Oxidation (M))|F}E]S{I|L};[HT]{I|L}AAS[{M(Oxidation (M))|F}E]{I|L} 6.3477;5.8928;5.2904;3.8975;3.8388;3.4677;2.8218;2.4765;2.3838;2.218 +;-;-;-;-;-;-;-;-;- + 359 1 2.217 67553.6 1.0 3724 3481 7196 DOHH2_400M_050219_1,7207 DOHH2_400M_050219_1,7207,HSDPSILGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7208 40.171 533.0 161690.0 25 0 10770.0 + -1 ELKKALMAL 9 130 516.8097410510442 1031.6049291688882 2 516.8104125857353 MULTI CID FTMS 0 0 0 7196 88502.5078125 1.0 0 0.0 12 Oxidation (M) _ELKKALM(Oxidation (M))AL_ REV__ENSG00000113360|ENST00000344624|DROSHA;REV__nc|ENSG00000113360|Q9NRR4-2|DROSHA;REV__nc|ENSG00000113360|Q9NRR4-3|DROSHA;REV__nc|ENSG00000113360|Q9NRR4-4|DROSHA 16.942295170755138 0.3780752226737986 1 {[QN]|[E{I|L}]|[KN]}K 3 -1 28.829 0.0 0.0 2.7946 0.0 0.0 0.0 658.3603609674436 658.3603609674436 13.25618597076895 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}K 2.7946 + + 288 + 1 2.217 70356.5 1.0 3725 3481 7196 DOHH2_400M_050219_1,7208 DOHH2_400M_050219_1,7208,ELKKALMAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7209 40.178 300.0 296350.0 25 0 28144.0 + 14180 IDGQFYTFL 9 133 368.5173863205546 1102.5303295618637 3 368.5172912478447 MULTI CID FTMS 0 0 0 7196 85534.75 1.0 0 0.0 13 Unmodified _IDGQFYTFL_ REV__ENSG00000102243|ENST00000370634|VGLL1;REV__ENSG00000170162|ENST00000326274|VGLL2;REV__ENSG00000206538|ENST00000398399|VGLL3;REV__nc|ENSG00000170162|Q8N8G2-2|VGLL2;REV__nc|ENSG00000206538|A8MV65-2|VGLL3 11.640296217721598 0.521594087909532 1 [VP][MT][HV]C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L} 9 -1 [VP][MT][HV]C(Carbamidomethyl (C)){M(Oxidation (M))|F} + + 14.604 -13.328 -1.372 1.3246 1.3246 48.431 0.0 0.0 0.0 0.0 -5.317431287605533 -5.317431287605533 0.0 0 0.0 0.0 0.0 0.0 [VP][MT][HV]C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L} 1.3246 - 42 + 1 2.217 73048.0 1.0 3726 3481 7196 DOHH2_400M_050219_1,7209 DOHH2_400M_050219_1,7209,IDGQFYTFL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7210 40.191 800.0 70385.0 25 0 5930.1 -1 0 79 964.4453572749215 2890.3142424249645 3 965.1120483279228 MULTI CID FTMS 0 0 0 7196 150155.234375 0.2500122535450468 3 -0.3318939208984375 14 1 Y 1 -1 6.9897 0.0 0.0 0.24183 0.0 0.0 699.325348201792 2024.9353103890548 2724.260658590847 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.24183 - 69 + 1 2.217 49784.8 0.5699999928474426 3727 3481 7196 DOHH2_400M_050219_1,7210 DOHH2_400M_050219_1,7210, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7211 40.205 800.0 115770.0 25 0 12624.0 + -1 KELENAVGSW 10 129 566.7835639004438 1131.5525748676876 2 566.7860595583916 MULTI CID FTMS 0 0 0 7196 90212.734375 1.0 0 0.0 15 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))C(Carbamidomethyl (C))VRNLVGSW_ nc|ENSG00000131018|Q8NF91-2|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-11|SYNE1;ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1 30.63653989081413 0.1413794767160703 1 {[CT]|[{M(Oxidation (M))|F}G]}SGVA[HK]GSW 11 -1 + 47.171 0.0 0.0 4.1687 4.1687 72.575 0.0 0.0 0.0 0.0 0.0 0.0 1.5757731917779338 0 0.0 0.0 0.4247425010840047 0.3494850021680094 {[CT]|[{M(Oxidation (M))|F}G]}SGVA[HK]GSW;{[CT]|[{M(Oxidation (M))|F}G]}SRA[HK]GSW;[YQ]G[HK]AVGSW;{[CT]|[{M(Oxidation (M))|F}G]}SGVA[Y{I|L}]RY;[YQ]G[HK]ARSW;{[TV]|[{I|L}S]}H[Y{I|L}]AVGSW;{[ES]|[DT]|[{I|L}C]}R[Q{I|L}]AVGSW;{[CT]|[{M(Oxidation (M))|F}G]}SGVA[HK]GC(Carbamidomethyl (C)){I|L};{[CT]|[{M(Oxidation (M))|F}G]}SRA[HK]GC(Carbamidomethyl (C)){I|L};{[TV]|[{I|L}S]}H[Y{I|L}]ARSW 4.1687;4.0295;3.8536;3.7482;3.7182;3.592;3.2005;3.1294;2.9901;2.9871 -;-;-;-;-;-;-;-;-;- 340 + 1 2.217 74371.2 0.4699999988079071 3728 3481 7196 DOHH2_400M_050219_1,7211 DOHH2_400M_050219_1,7211,CVRNLVGSW False False KELENAVGSW 40.2053 566.786059558392 445313.0 7196.0 nc|ENSG00000131018|Q8NF91-2|SYNE1;;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;;nc|ENSG00000131018|Q8NF91-4|SYNE1;;nc|ENSG00000131018|Q8NF91-11|SYNE1;;ENSG00000131018|ENST00000367255|SYNE1;;nc|ENSG00000131018|Q8NF91-8|SYNE1 4.763393719991048 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7212 40.22 800.0 166640.0 25 0 8496.5 -1 0 80 950.6214223345202 0 950.6215698122978 PEAK CID FTMS 0 0 0 7196 80981.4609375 1.0 0 0.0 16 1 {M(Oxidation (M))|F}T 2 -1 11.81 0.0 0.0 0.62185 0.0 0.0 1295.9722015032214 352.11567748962585 1648.0878789928472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 {M(Oxidation (M))|F}T 0.62185 - 315 + 1 2.217 95570.3 0.449999988079071 3729 3481 7196 DOHH2_400M_050219_1,7212 DOHH2_400M_050219_1,7212, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7214 40.234 576.0 142700.0 25 0 5688.5 -1 0 93 946.4340955766586 1890.853638220117 2 946.4345580935478 MULTI CID FTMS 0 0 0 7213 152489.140625 0.276196437423524 1 -0.1075286865234375 1 1 [MN]PN{I|L}NEPWVEEN{I|L} 14 -1 84.527 0.0 0.0 4.4703 0.0 0.0 0.0 208.0727480524047 208.0727480524047 65.54419780016082 0.0 0.0 0.0 0 1.4876954943324543 1.5228787452803376 0.2742275032520141 1.1237125054200234 [MN]PN{I|L}NEPWVEEN{I|L} 4.4703 - 1500 + 1 2.237 60327.3 1.0 3730 3482 7213 DOHH2_400M_050219_1,7214 DOHH2_400M_050219_1,7214, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7215 40.236 44.0 1504700.0 25 0 220830.0 42756 VVGALQPP 8 95 390.7335760028661 779.4525990725323 2 390.7328674197197 MULTI CID FTMS 0 0 0 7213 1197198.5 1.0 0 0.0 2 Unmodified _VVGALQPP_ ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.237 57996.9 1.0 3731 3482 7213 DOHH2_400M_050219_1,7215 DOHH2_400M_050219_1,7215,VVGALQPP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7216 40.237 71.0 1086800.0 25 0 185160.0 + 6949 EEIAIIPSKKL 11 79 414.2554293054492 1239.7444585165476 3 414.2551147341728 MULTI CID FTMS 0 0 0 7213 730579.1875 0.7888464425248503 -1 0.1157073974609375 3 Unmodified _EEIAIIPSKKL_ ENSG00000182774|ENST00000647841|RPS17;ENST00000559273.1_1_15:83208730-83209179:-|nuORF;ENST00000560639.1_1_15:83207600-83209179:-|nuORF 57.24910588100465 0.0803095280301687 1 EE{I|L}A 4 7 30.481 0.0 0.0 2.4587 0.0 0.0 0.0 794.5151243703164 794.5151243703164 1.3515187806019249 0.0 0.0 0.0 0 0.5 1.3979400086720375 1.325257498915995 0.0 + EE{I|L}A 2.4587 + + 171 1 2.237 68017.7 1.0 3732 3482 7213 DOHH2_400M_050219_1,7216 DOHH2_400M_050219_1,7216,EEIAIIPSKKL True True EEIAIIPSKKL 40.237174 414.255114734173 16217167.0 7213.0 ENSG00000182774|ENST00000647841|RPS17;;ENST00000560639.1_1_15:83207600-83209179:-|nuORF;;ENST00000559273.1_1_15:83208730-83209179:-|nuORF 7.100888888041179 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7217 40.239 94.0 1419800.0 25 0 95011.0 + 6950 EEIAIIPSKKL 11 117 620.8792706556237 1239.743988378047 2 620.8792602419853 MULTI CID FTMS 0 0 0 7213 570998.125 0.6543493965082438 -1 0.1157073974609375 4 Unmodified _EEIAIIPSKKL_ ENSG00000182774|ENST00000647841|RPS17;ENST00000559273.1_1_15:83208730-83209179:-|nuORF;ENST00000560639.1_1_15:83207600-83209179:-|nuORF 79.42699986076722 0.0080827643292781 1 EE{I|L}A{I|L}{I|L}PSKK{I|L} 11 0 + 75.584 0.0 0.0 6.0968 6.0968 93.831 0.0 0.0 0.0 55.53042708721975 11.86800599224135 11.86800599224135 75.58446560092683 0 1.6989700043360187 1.3979400086720375 0.7302046884880937 0.3807196863200844 + + EE{I|L}A{I|L}{I|L}PSKK{I|L} 6.0968 + + 837 + 1 2.237 99321.7 1.0 3733 3482 7213 DOHH2_400M_050219_1,7217 DOHH2_400M_050219_1,7217,EEIAIIPSKKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7218 40.242 109.0 931180.0 25 0 70598.0 + 4798 DENSVIKSF 9 118 519.7587765467014 1037.5030001602026 2 519.7586547732353 MULTI CID FTMS 0 0 0 7213 491230.875 0.1250421675786827 -2 0.2308540344238281 5 Unmodified _DENSVIKSF_ ENSG00000130935|ENST00000253247|NOL11 76.82478488871298 0.0184607444814265 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NSV{I|L}KS{M(Oxidation (M))|F} 9 0 + 75.147 0.0 0.0 7.2431 7.2431 91.365 0.0 0.0 0.0 51.864913839330335 14.97302484056646 14.97302484056646 9.208187539523747 0 1.2302046884880935 0.0 1.09733495922753 0.4247425010840047 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NSV{I|L}KS{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGSV{I|L}KS{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WP]{I|L}KS{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NS[RH]{I|L}[PA];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGS[RH]{I|L}[PA] 7.2431;6.3556;2.8493;2.4779;1.5904 +;-;-;-;- + 266 + 1 2.237 82476.1 1.0 3734 3482 7213 DOHH2_400M_050219_1,7218 DOHH2_400M_050219_1,7218,DENSVIKSF True True DENSVIKSF 40.241549 519.758654773235 47101144.0 7213.0 ENSG00000130935|ENST00000253247|NOL11 6.918595949808757 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7219 40.243 86.0 702840.0 25 0 84171.0 + 25160 MRRQLEAW 8 93 545.2865774079964 1088.5586018827928 2 545.2861816287041 MULTI CID FTMS 0 0 0 7213 490401.6875 0.8959806617563599 -1 0.1157073974609375 6 Unmodified _MRRQLEAW_ REV__ENSG00000242866|ENST00000450892|STRC;REV__nc|ENSG00000290691|A6NGW2|STRCP1 18.13498045792455 0.6430038125133779 1 VYMATT{I|L}KY 9 -1 + 88.744 0.0 0.0 8.1524 8.1524 94.935 0.0 0.0 0.0 69.27977691042015 14.973024840566469 14.973024840566469 12.67606240177031 0 0.7134679910804405 2.0 0.3807196863200844 0.0 VYMATT{I|L}KY;VYM{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}KY;VYMA[KQ]VP[PG];VYM[VP]MVP[PG];{[TV]|[{I|L}S]}PA[KQ]AM{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[TV]|[{I|L}S]}PAM[VP]M{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[WT]|[RM]}QQ[HV]KY;[K{I|L}][HC][{I|L}T]M{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 8.1524;6.9879;4.6812;4.2429;1.9922;1.8527;0.97697;0.76571 -;-;-;-;-;-;-;- 223 + 1 2.237 51946.9 1.0 3735 3482 7213 DOHH2_400M_050219_1,7219 DOHH2_400M_050219_1,7219,MRRQLEAW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7220 40.247 157.0 694280.0 25 0 66247.0 + 35372 STDWHVVNY 9 124 560.7563728568346 1119.498192780469 2 560.7567016482353 MULTI CID FTMS 0 0 0 7213 356530.96875 0.3076464812592477 -1 0.1157073974609375 7 Unmodified _STDWHVVNY_ ENSG00000147251|ENST00000276202|DOCK11 85.27202061508552 0.0162393975915471 1 [HV]WDTSVNY 9 6 + 52.577 0.0 0.0 4.6965 4.6965 77.701 0.0 0.0 0.0 3.979400086720375 9.19347469197298 3.979400086720375 3.979400086720375 0 0.3807196863200844 0.8239087409443188 0.3252574989159953 0.4247425010840047 [HV]WDTSVNY;[WH]DVTSVNY;[WH]D{[MG]|[TS]}VVNY;[WH]VDTSVNY;{[MG]|[TS]}D[WH]VVNY;[HV]VD{[MG]|[TS]}SVNY;[HV]WDTSVGGY;[WH]{[CA]|SS}EVVNY;[WH]D{[WT]|[RM]}VNY;[WH]DVTSVGGY 4.6965;4.341;4.1439;4.0721;3.8487;3.7166;3.4945;3.3372;3.3203;3.1391 -;-;-;-;+;-;-;-;-;- + 1665 1 2.237 86432.3 1.0 3736 3482 7213 DOHH2_400M_050219_1,7220 DOHH2_400M_050219_1,7220,STDWHVVNY True True STDWHVVNY 40.246595 560.7571 5975239.5 7213.0 ENSG00000147251|ENST00000276202|DOCK11 6.300412178039551 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7221 40.251 224.0 638960.0 25 0 50238.0 + 35145 SRGDFVVEY 9 97 536.258797948199 1070.503042963198 2 536.2589599490166 MULTI CID FTMS 0 0 0 7213 192617.671875 0.0170053194464296 -2 0.2308540344238281 8 Unmodified _SRGDFVVEY_ ENSG00000183955|ENST00000402868|KMT5A;ENST00000437519.5_1_12:123868737-123892247:+|nuORF;nc|ENSG00000183955|Q9NQR1|KMT5A 24.99096001346401 0.2132109383330889 1 [YE][RN]VVEY 8 5 + 50.208 0.0 0.0 4.6901 4.6901 78.9 0.0 0.0 0.0 3.442124970647029 37.900990676322905 3.442124970647029 5.295000083553205 0 0.8807196863200843 0.0 0.2742275032520141 0.3252574989159953 [YE][RN]VVEY;[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}VVEY;[YE][RN]VEVY;[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}VEVY;[YE]{[QD]|[EN]|[WG]|[KD]|[RS]}[KP]EY;{NN|[MP]|[D{I|L}]|[EV]}[RV][YN]EY;{NN|[MP]|[D{I|L}]|[EV]}[RV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]VY;[Q{I|L}]{[QN]|[E{I|L}]|[KN]}[YN]EY;{[QN]|[E{I|L}]|[KN]}[Q{I|L}][YN]EY;[Q{I|L}]{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]VY 4.6901;4.1955;4.0533;3.5587;2.7967;2.7025;2.0657;0.99873;0.78346;0.36188 -;-;-;-;-;-;-;-;-;- 184 1 2.237 115102.9 1.0 3737 3482 7213 DOHH2_400M_050219_1,7221 DOHH2_400M_050219_1,7221,SRGDFVVEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7222 40.258 378.0 307280.0 25 0 27188.0 + 31852 RTGIPISM 8 122 437.7443109848748 873.4740690365496 2 437.7442809939384 MULTI CID FTMS 0 0 0 7213 192431.78125 0.5407202171796431 -1 0.1157073974609375 9 Unmodified _RTGIPISM_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 39.94969957227396 0.2351327405675156 1 [WK]{I|L}P{I|L}SM 7 3 + 50.054 0.0 0.0 5.7305 5.7305 80.563 0.0 0.0 0.0 3.2200630877780867 14.81508216873415 3.2200630877780867 3.2200630877780867 0 1.3494850021680094 0.0 0.0 0.2614393726401688 [WK]{I|L}P{I|L}SM;[{I|L}P]S{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SM;[{I|L}P][WK]{I|L}SM;{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}SM;{[TV]|[{I|L}S]}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SM;[{I|L}P]{I|L}{I|L}[C(Carbamidomethyl (C))K]M 5.7305;5.3618;4.6864;3.8299;3.0721;1.7516 -;-;-;-;-;- 98 1 2.237 96260.8 1.0 3738 3482 7213 DOHH2_400M_050219_1,7222 DOHH2_400M_050219_1,7222,RTGIPISM False True RTGIPISM 40.257608 437.744280993938 1826934.75 7213.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 4.289389769236247 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7223 40.261 166.0 358500.0 25 0 40081.0 + 24448 MHIPTGVI 8 94 434.2433033952613 866.4720538573225 2 434.2426025271416 MULTI CID FTMS 0 0 0 7213 152301.796875 0.1605085065277278 5 -0.4860343933105469 10 Unmodified _MHIPTGVI_ REV__ENSG00000133059|ENST00000367162|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-3|DSTYK 2.889219685676258 0.8067950007271085 1 V 1 -1 5.4846 0.0 0.0 0.63297 0.0 0.0 432.25899340986 332.12397180728755 764.3829652171476 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.63297 + + 4 + 1 2.237 50226.5 1.0 3739 3482 7213 DOHH2_400M_050219_1,7223 DOHH2_400M_050219_1,7223,MHIPTGVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7224 40.275 800.0 132210.0 25 0 10223.0 44178 YLELVLCV 8 173 476.2634771887542 0 476.2376586794853 PEAK CID FTMS 0 0 0 7213 9876.0009765625 0.291492279984546 2 -0.2161865234375 11 Unmodified _YLELVLCV_ ENSG00000165355|ENST00000298097|FBXO33 3.944395688203298 0.5857260919048012 1 D 1 8 3.0989 0.0 0.0 0.32603 0.0 0.0 360.2007692195022 472.2719210260376 832.4726902455398 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.32603 - 22 + 1 2.237 83773.3 0.5699999928474426 3740 3482 7213 DOHH2_400M_050219_1,7224 DOHH2_400M_050219_1,7224,YLELVLCV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7225 40.282 400.0 261510.0 25 0 14792.0 + 28437 PTAVVPLRY 9 133 508.3002449182056 1014.5859369032112 2 508.3004028201103 MULTI CID FTMS 0 0 0 7213 119806.34375 0.4696282861582138 -1 0.1157073974609375 12 Unmodified _PTAVVPLRY_ ENSG00000113441|ENST00000231368|LNPEP;nc|ENSG00000113441|Q9UIQ6-2|LNPEP;nc|ENSG00000113441|Q9UIQ6-3|LNPEP 56.17704186161178 0.0281986971544335 1 PTAVVY[RP]{I|L} 9 3 + 79.873 0.0 0.0 7.8725 7.8725 85.233 0.0 0.0 0.0 66.57267607174376 1.354925662989146 1.354925662989146 2.905645619858163 0 1.674742501084005 2.0 0.0 0.3494850021680094 PTAVVY[RP]{I|L};PTAVVY[R{I|L}]P;PTAVV[Y{I|L}][PG]V;PTAVYV[RP]{I|L};PTAVV[Y{I|L}]VGP;PTAVYV[R{I|L}]P;PTAVY[{I|L}V][PG]V;PTAVY[{I|L}V]VGP;PT[R{I|L}]Y[RP]{I|L};PT[R{I|L}]Y[R{I|L}]P 7.8725;7.5861;6.7741;6.5186;6.48;6.2322;5.7646;5.4705;4.7712;4.4848 -;-;-;-;-;-;-;-;-;- 363 + 1 2.237 92719.4 1.0 3741 3482 7213 DOHH2_400M_050219_1,7225 DOHH2_400M_050219_1,7225,PTAVVPLRY True True PTAVVPLRY 40.281818 508.30040282011 1598363.625 7213.0 nc|ENSG00000113441|Q9UIQ6-2|LNPEP;;nc|ENSG00000113441|Q9UIQ6-3|LNPEP;;ENSG00000113441|ENST00000231368|LNPEP 5.995233535766602 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7226 40.296 800.0 92952.0 25 0 4641.8 + 32796 SEETLANNTW 10 136 582.7624281812207 1163.5103034292413 2 582.7623168826103 MULTI CID FTMS 0 0 0 7213 99739.8671875 1.0 0 0.0 13 Unmodified _SEETLANNTW_ ENSG00000164944|ENST00000297591|VIRMA;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA 19.256988751693697 0.5244284437930726 1 EEST 4 7 17.056 0.0 0.0 1.4659 0.0 0.0 0.0 714.3218323201194 714.3218323201194 2.1079529480126524 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.6421590589602533 0.0 EEST 1.4659 - 371 1 2.237 59768.2 0.5699999928474426 3742 3482 7213 DOHH2_400M_050219_1,7226 DOHH2_400M_050219_1,7226,SEETLANNTW False True SEETLANNTW 40.295649 582.76231688261 860804.0 7213.0 nc|ENSG00000164944|Q69YN4-2|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA;;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;;nc|ENSG00000164944|Q69YN4-4|VIRMA;;ENSG00000164944|ENST00000297591|VIRMA 4.918703158696492 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7227 40.303 340.0 159470.0 25 0 11761.0 28324 PRVPSRST 8 96 450.2554033044344 898.4962536756688 2 450.2559387087822 MULTI CID FTMS 0 0 0 7213 91671.4453125 0.3549593228745584 2 -0.2161865234375 14 Unmodified _PRVPSRST_ ENST00000398846.5_1_11:64808600-64808915:+|nuORF 4.75600775471527 0.7954636275367004 1 {I|L} 1 8 11.42 0.0 0.0 1.271 0.0 0.0 767.4013115143391 0.0 767.4013115143391 0.0 4.430283238465815 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.271 - 21 + 1 2.237 48624.5 1.0 3743 3482 7213 DOHH2_400M_050219_1,7227 DOHH2_400M_050219_1,7227,PRVPSRST False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7228 40.312 485.0 209830.0 25 0 26063.0 + 5772 DPPLKFMSV 9 136 525.2700783984484 1048.5256038636967 2 525.2702514529228 MULTI CID FTMS 0 0 0 7213 123830.0 0.6173578776048311 -1 0.1157073974609375 15 Oxidation (M) _DPPLKFM(Oxidation (M))SV_ ENSG00000169813|ENST00000682386|HNRNPF 57.72198328787511 0.0273433238377839 1 DPP{I|L}K{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV 9 0 + 79.156 0.0 0.0 7.5493 7.5493 93.42 0.0 0.0 0.0 36.47817481888637 10.685467017147474 10.685467017147474 10.685467017147474 0 0.8494850021680094 2.0 0.9829535345634596 0.0 + + DPP{I|L}K{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV;DPP{I|L}K{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Y;DPP{I|L}K{M(Oxidation (M))|F}{[DA]|[EG]}{M(Oxidation (M))|F};DPP{I|L}K{[CT]|[{M(Oxidation (M))|F}G]}Y{I|L};DPP[KS][KS]QY;DPP[KS]{[ET]|[MV]}{I|L}Y;DPP[KS]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{I|L};DPP[KS]{[ET]|[MV]}Y{I|L};DPP{I|L}KYY[PG];DPP{[QS]|[NT]}[{I|L}P]Q[PA] 7.5493;6.5302;6.0315;5.992;5.717;5.6032;5.2968;5.065;4.3666;4.3384 +;-;-;-;-;-;-;-;-;- + 771 + 1 2.237 86668.9 1.0 3744 3482 7213 DOHH2_400M_050219_1,7228 DOHH2_400M_050219_1,7228,DPPLKFMSV True False DPPLKFMSV 40.311553 525.270251452923 1923333.25 7213.0 ENSG00000169813|ENST00000682386|HNRNPF 6.389012018839519 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7229 40.315 201.0 275660.0 25 0 31502.0 42140 VRWAPAPS 8 102 442.2420774057125 0 442.2420226931572 PEAK CID FTMS 0 0 0 7213 124039.75 0.6732069038242536 2 -0.2161865234375 16 Unmodified _VRWAPAPS_ ENST00000595618.5_2_19:17323164-17323401:+|nuORF 2.577480529830294 0.5910327097116076 1 A 1 7 2.4743 0.0 0.0 0.28038 0.0 0.0 441.2130233643563 367.1968477838501 808.4098711482063 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.28038 + + 2 + 1 2.237 47982.6 1.0 3745 3482 7213 DOHH2_400M_050219_1,7229 DOHH2_400M_050219_1,7229,VRWAPAPS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7230 40.324 513.0 207630.0 25 0 10284.0 -1 QTCGNVSNQF 10 150 577.7485263799722 1153.4824998267443 2 577.7473022341728 MULTI CID FTMS 0 0 0 7213 106489.296875 0.4497405944880123 1 -0.1075286865234375 17 Carbamidomethyl (C) _QTC(Carbamidomethyl (C))GNVSNQF_ ENSG00000182508|ENST00000371968|LHFPL1 8.745405648335112 0.6861838735306406 1 YS 2 -1 31.938 0.0 0.0 2.7689 0.0 0.0 0.0 900.3658541315061 900.3658541315061 18.44335023848103 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 YS 2.7689 - 559 + 1 2.237 84604.7 1.0 3746 3482 7213 DOHH2_400M_050219_1,7230 DOHH2_400M_050219_1,7230,QTCGNVSNQF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7231 40.328 176.0 262780.0 25 0 22160.0 33935 SLGQTELIL 9 97 487.2830273653459 0 487.2841369509697 PEAK CID FTMS 0 0 0 7213 102605.265625 1.0 0 0.0 18 Unmodified _SLGQTELIL_ nc|ENSG00000204296|Q5SRN2|TSBP1 11.640296217721598 0.2934555500198502 1 E 1 8 6.528 0.0 0.0 0.67122 0.0 0.0 772.4354262133106 68.05133234195546 840.4867585552661 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1923877696554315 0.0 + E 0.67122 + + 16 + 1 2.237 39796.4 1.0 3747 3482 7213 DOHH2_400M_050219_1,7231 DOHH2_400M_050219_1,7231,SLGQTELIL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7233 40.334 81.0 584590.0 25 0 60421.0 + 38577 TTDFPGNYSGY 11 78 611.2567360477443 1220.4989191622883 2 611.2569457888603 MULTI CID FTMS 0 0 0 7232 577561.8125 0.409328619647992 6 -0.5060615539550781 1 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 49.55428908609986 0.1200983873401432 1 YSGY 4 7 27.964 0.0 0.0 2.2912 0.0 0.0 732.304382884748 0.0 732.304382884748 0.0 11.264100213633768 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + YSGY 2.2912 + + 267 + 1 2.235 40531.3 1.0 3748 3483 7232 DOHH2_400M_050219_1,7233 DOHH2_400M_050219_1,7233,TTDFPGNYSGY True True TTDFPGNYSGY 40.333582 611.25694578886 56872530.0 7232.0 nc|ENSG00000171453|O15160-2|POLR1C;;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;;ENSG00000171453|ENST00000642195|POLR1C 8.909122308095297 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7234 40.337 203.0 228650.0 25 0 15381.0 + -1 NFQCLLGSY 9 97 551.2546966434456 1100.4948403536912 2 552.2720214724541 MULTI CID FTMS 0 0 0 7232 80552.2734375 0.7949062643975554 -1 0.1075286865234375 2 Carbamidomethyl (C) _NFQC(Carbamidomethyl (C))LLGSY_ REV__ENSG00000075702|ENST00000401500|WDR62;REV__ENST00000378860.8_1_19:36545867-36564559:+|nuORF;REV__nc|ENSG00000075702|O43379-2|WDR62;REV__nc|ENSG00000075702|O43379-3|WDR62;REV__nc|ENSG00000075702|O43379|WDR62 7.910154910731844 0.6385446671287552 1 [EP]HE{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L} 9 -1 + 24.09 0.0 0.0 2.1891 2.1891 71.636 0.0 0.0 0.0 3.121374995494296 1.8719876294112967 1.8719876294112967 4.451687839877891 0 0.0 0.0 0.4247425010840047 0.0 [EP]HE{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};[EP]H[TP][RD]SY;[EP]HE{M(Oxidation (M))|F}[QT]T{I|L};[EP]H[TP]{[CA]|SS}{M(Oxidation (M))|F}S{I|L} 2.1891;1.7845;1.4831;0.99073 -;-;-;- 88 + 1 2.235 39366.0 1.0 3749 3483 7232 DOHH2_400M_050219_1,7234 DOHH2_400M_050219_1,7234,NFQCLLGSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7235 40.339 9.2 7272500.0 25 0 861250.0 + 12441 GTVYEDLRY 9 65 558.2720618531396 1114.529570773079 2 558.2725707888603 MULTI CID FTMS 0 0 0 7232 6017571.0 0.3573442264780901 -1 0.1075286865234375 3 Unmodified _GTVYEDLRY_ chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-2|UBE2C 69.10491478415734 0.0214449631113747 1 {[SA]|[TG]}VYED{I|L}RY 9 0 + 80.174 0.0 0.0 7.1935 7.1935 95.034 0.0 0.0 0.0 66.36168767277148 12.587418566968154 12.587418566968154 21.7659970366416 0 0.7059771852360797 1.3979400086720375 0.8494850021680094 0.3807196863200844 + + {[SA]|[TG]}VYED{I|L}RY;{[SA]|[TG]}VYEDY[R{I|L}];{[SA]|[TG]}VQQYY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YY{[HG]|PP}RY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[C(Carbamidomethyl (C))N]D{I|L}RY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE[R{M(Oxidation (M))|F}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[TV]|[{I|L}S]}GQQYY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QQYY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[YV][R{M(Oxidation (M))|F}][C(Carbamidomethyl (C))N]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[C(Carbamidomethyl (C))N]DY[R{I|L}] 7.1935;5.2406;3.2142;2.4849;2.28;2.1203;1.7756;1.0663;0.90831;0.32706 +;-;-;-;-;-;-;-;-;- + 164 + 1 2.235 62486.2 1.0 3750 3483 7232 DOHH2_400M_050219_1,7235 DOHH2_400M_050219_1,7235,GTVYEDLRY True True GTVYEDLRY 40.338644 558.27257078886 264069816.0 7232.0 ENSG00000175063|ENST00000356455|UBE2C;;nc|ENSG00000175063|O00762-2|UBE2C;;chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C 8.865647951761881 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7236 40.341 123.0 428280.0 25 0 38091.0 + 8491 ETDKNGFLQY 10 82 607.7885300001383 1213.5625070670765 2 607.7886230349541 MULTI CID FTMS 0 0 0 7232 414587.40625 1.0 0 0.0 4 Unmodified _ETDKNGFLQY_ ENSG00000106733|ENST00000361092|NMRK1;nc|ENSG00000106733|Q9NWW6-2|NMRK1 36.12702656103203 0.1984647928738587 1 {I|L}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}QY 7 5 42.717 0.0 0.0 3.52 0.0 0.0 327.14851888523896 0.0 327.14851888523896 0.0 30.93460559274201 0.0 0.0 0 0.6989700043360187 0.0 0.0 1.424742501084005 {I|L}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}QY 3.52 - 487 + 1 2.235 45873.8 1.0 3751 3483 7232 DOHH2_400M_050219_1,7236 DOHH2_400M_050219_1,7236,ETDKNGFLQY False True ETDKNGFLQY 40.341194 607.788623034954 2771507.25 7232.0 nc|ENSG00000106733|Q9NWW6-2|NMRK1;;ENSG00000106733|ENST00000361092|NMRK1 8.008079051971436 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7237 40.344 157.0 407570.0 25 0 74522.0 -1 KLKLFPCP 8 94 501.7946599745563 1001.5747670159126 2 501.2905456423759 MULTI CID FTMS 0 0 0 7232 305381.21875 0.3846370237163335 -4 0.461944580078125 5 Carbamidomethyl (C) _KLKLFPC(Carbamidomethyl (C))P_ ENST00000406246.7_1_11:65421573-65421639:-|nuORF 2.889219685676258 0.8067950007271085 1 Y 1 -1 12.764 0.0 0.0 1.2744 0.0 0.0 820.5004242198173 0.0 820.5004242198173 0.0 3.3002596915282467 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2744 - 18 + 1 2.235 55480.1 1.0 3752 3483 7232 DOHH2_400M_050219_1,7237 DOHH2_400M_050219_1,7237,KLKLFPCP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7238 40.349 229.0 387480.0 25 0 57819.0 + 45545 YVALFVVF 8 114 479.27752848024926 956.5405040272984 2 479.2776672244072 MULTI CID FTMS 0 0 0 7232 275374.84375 0.1330821635124625 -7 0.84130859375 6 Unmodified _YVALFVVF_ REV__ENSG00000150269|ENST00000279791|OR5M9 6.354104778181461 0.7857632046190106 1 [YV][R{M(Oxidation (M))|F}]EY 6 -1 24.895 0.0 0.0 2.6026 0.0 0.0 0.0 96.12074019356729 96.12074019356729 15.14064001128478 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YV][R{M(Oxidation (M))|F}]EY 2.6026 - 89 1 2.235 70076.9 1.0 3753 3483 7232 DOHH2_400M_050219_1,7238 DOHH2_400M_050219_1,7238,YVALFVVF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7239 40.352 150.0 364530.0 25 0 33985.0 + 14221 IDNNIEQISSY 11 100 648.308542329226 1294.602531725252 2 648.3094970583916 MULTI CID FTMS 0 0 0 7232 238077.578125 0.5060664342504371 -1 0.1075286865234375 7 Unmodified _IDNNIEQISSY_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 57.24910588100465 0.0803095280301687 1 QE{I|L}TSSY 7 7 57.497 0.0 0.0 4.4413 0.0 0.0 468.22106129486855 0.0 468.22106129486855 0.0 28.859469618370355 0.0 0.0 0 0.0 0.0 1.055462187404089 0.4247425010840047 QE{I|L}TSSY 4.4413 - 1625 + 1 2.235 46584.4 1.0 3754 3483 7232 DOHH2_400M_050219_1,7239 DOHH2_400M_050219_1,7239,IDNNIEQISSY True True IDNNIEQISSY 40.351596 648.309497058392 2637371.5 7232.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 6.567855676015218 2.0 True 11.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 7240 40.365 800.0 240780.0 25 0 39470.0 + 19636 LGFIKALT 8 156 431.77207351646615 0 431.7721435427666 PEAK CID FTMS 0 0 0 7232 227332.4375 1.0 0 0.0 8 Unmodified _LGFIKALT_ REV__ENSG00000070019|ENST00000261170|GUCY2C 5.230669730166228 0.5807325378471833 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.235 149059.3 0.7400000095367432 3755 3483 7232 DOHH2_400M_050219_1,7240 DOHH2_400M_050219_1,7240,LGFIKALT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7241 40.379 800.0 153050.0 25 0 28721.0 + 38463 TSDHFETIMKY 11 120 686.3164422364097 1370.6183315396192 2 686.3158447146416 MULTI CID FTMS 0 0 0 7232 172880.46875 1.0 0 0.0 9 Unmodified _TSDHFETIMKY_ ENSG00000136628|ENST00000366923|EPRS1 84.5221896805406 0.0042935016478757 1 [HD]{[MG]|[TS]}{M(Oxidation (M))|F}ET{I|L}MKY 11 4 + 79.385 0.0 0.0 5.7919 5.7919 84.479 0.0 0.0 0.0 5.318850843942144 59.458191842299286 5.318850843942144 6.989700043360188 0 2.059894379144197 1.3979400086720375 1.555462187404089 0.0 [HD]{[MG]|[TS]}{M(Oxidation (M))|F}ET{I|L}MKY;[HD]{M(Oxidation (M))|F}{[MG]|[TS]}ET{I|L}MKY;[HS]{I|L}C{M(Oxidation (M))|F}ET{I|L}MKY;[HD]{[MG]|[TS]}{M(Oxidation (M))|F}ETM{I|L}KY;{[MG]|[TS]}DH{M(Oxidation (M))|F}ET{I|L}MKY;[HD]{M(Oxidation (M))|F}[WM]T{I|L}MKY;[HD]{M(Oxidation (M))|F}{[MG]|[TS]}ETM{I|L}KY;[HS]{I|L}C{M(Oxidation (M))|F}ETM{I|L}KY;[PS]QQ{M(Oxidation (M))|F}ET{I|L}MKY;{[MG]|[TS]}DH{M(Oxidation (M))|F}ETM{I|L}KY 5.7919;5.2819;5.02;4.8012;4.7845;4.5244;4.2913;4.0293;3.8383;3.7938 -;-;-;-;+;-;-;-;-;- + 1308 1 2.235 93572.8 0.75 3756 3483 7232 DOHH2_400M_050219_1,7241 DOHH2_400M_050219_1,7241,TSDHFETIMKY True True TSDHFETIMKY 40.379259 686.315844714642 899722.9375 7232.0 ENSG00000136628|ENST00000366923|EPRS1 7.964077790578206 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7242 40.393 800.0 239150.0 25 0 17666.0 + -1 EEKDMKMYKYF 11 124 772.3447696171241 1542.6749863010482 2 772.3447143435478 MULTI CID FTMS 0 0 0 7232 145691.15625 0.9841648846453444 -1 0.1075286865234375 10 2 Oxidation (M) _EEKDM(Oxidation (M))KM(Oxidation (M))YKYF_ REV__ENSG00000182272|ENST00000329962|B4GALNT4 8.155526934196011 0.8366696279279818 1 {[QG]|[NA]}VM[DN]AQWNA{M(Oxidation (M))|F}Y 13 -1 + 55.86 0.0 0.0 3.621 3.621 52.022 0.0 0.0 0.0 1.1209362685821065 1.1209362685821065 1.1209362685821065 0.0 0 1.211758134947864 0.958607314841775 0.0 0.6421590589602533 {[QG]|[NA]}VM[DN]AQWNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}VM[DN]AWQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}VMRSGWQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}VMRSGQWNA{M(Oxidation (M))|F}Y;{[{M(Oxidation (M))|F}H]|[RQ]}DNWQGPH{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{[{M(Oxidation (M))|F}H]|[RQ]}DNQWGPH{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{[{M(Oxidation (M))|F}H]|[RQ]}DNQQM[WQ]{M(Oxidation (M))|F}Y;{[{M(Oxidation (M))|F}H]|[RQ]}DNWQA[YG]{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{[{M(Oxidation (M))|F}H]|[RQ]}DNQWA[YG]{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{[QG]|[NA]}VMRSDQQNA{M(Oxidation (M))|F}Y 3.621;3.621;3.5668;3.5668;3.5483;3.5483;3.5101;3.4558;3.4558;3.2575 -;-;-;-;-;-;-;-;-;- 8822 1 2.235 132728.1 0.6800000071525574 3757 3483 7232 DOHH2_400M_050219_1,7242 DOHH2_400M_050219_1,7242,EEKDMKMYKYF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7243 40.407 800.0 93874.0 25 0 5369.9 -1 0 90 796.6861096850485 2387.0364996553453 3 797.0209838747978 MULTI CID FTMS 0 0 0 7232 131288.171875 0.9031992766187344 1 -0.1086578369140625 11 1 YEE{M(Oxidation (M))|F} 4 -1 39.993 0.0 0.0 1.6754 0.0 0.0 1800.8060827155691 0.0 1800.8060827155691 0.0 19.35795955899096 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 YEE{M(Oxidation (M))|F} 1.6754 - 168 1 2.235 58117.2 0.6499999761581421 3758 3483 7232 DOHH2_400M_050219_1,7243 DOHH2_400M_050219_1,7243, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7244 40.422 800.0 151450.0 25 0 14911.0 -1 FEAVVCMYR 9 128 595.7696460954255 0 595.7700683474541 PEAK CID FTMS 0 0 0 7232 89788.2421875 1.0 0 0.0 12 Carbamidomethyl (C),Oxidation (M) _FEAVVC(Carbamidomethyl (C))M(Oxidation (M))YR_ ENSG00000121039|ENST00000240285|RDH10 19.256988751693697 0.2078072434435185 1 EG{I|L}{I|L}AR 6 -1 49.998 0.0 0.0 4.2032 0.0 0.0 147.06473886688497 400.0662020318969 547.1309408987819 0.0 0.0 0.0 0.0 0 1.274227503252014 0.0 0.0 0.6989700043360187 EG{I|L}{I|L}AR 4.2032 - 116 + 1 2.235 92040.8 0.5099999904632568 3759 3483 7232 DOHH2_400M_050219_1,7244 DOHH2_400M_050219_1,7244,FEAVVCMYR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7245 40.425 123.0 507570.0 25 0 70575.0 15827 ISIGQTRR 8 92 465.7773942085099 0 465.7776977419853 PEAK CID FTMS 0 0 0 7232 467572.3125 0.7102535060969821 3 -0.2988357543945312 13 Unmodified _ISIGQTRR_ ENST00000299954.13_1_17:65373738-65373861:+|nuORF 8.593279151180031 0.5573742999696857 1 {I|L} 1 7 6.9897 0.0 0.0 0.75195 0.0 0.0 464.27959813206047 349.1523531549438 813.4319512870043 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.75195 + + 2 + 1 2.235 53799.8 1.0 3760 3483 7232 DOHH2_400M_050219_1,7245 DOHH2_400M_050219_1,7245,ISIGQTRR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7246 40.428 158.0 302240.0 25 0 30712.0 45226 YRGLQPLP 8 76 472.26980211483175 942.5250512964636 2 472.2744323611259 MULTI CID FTMS 0 0 0 7232 252258.90625 0.4470545396143238 -7 0.84130859375 14 Unmodified _YRGLQPLP_ ENSG00000170128|ENST00000304244|GPR25 2.577480529830294 0.808687252328423 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.235 40990.8 1.0 3761 3483 7232 DOHH2_400M_050219_1,7246 DOHH2_400M_050219_1,7246,YRGLQPLP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7247 40.432 239.0 244560.0 25 0 16512.0 + + -1 QENSVYLSY 9 100 551.2546966434456 1100.4948403536912 2 551.7569457888603 MULTI CID FTMS 0 0 0 7232 217330.296875 1.0 0 0.0 15 2 Oxidation (M) _SQM(Oxidation (M))KAVQM(Oxidation (M))F_ ENSG00000096872|ENST00000380062|IFT74;nc|ENSG00000096872|Q96LB3-2|IFT74 7.910154910731844 0.6385446671287552 1 YVQMY 5 -1 27.224 0.0 0.0 2.4738 0.0 0.0 398.2012745351349 0.0 398.2012745351349 0.0 15.80358866042234 0.0 0.0 0 0.0 0.0 0.0 0.8807196863200843 YVQMY 2.4738 - 132 + 1 2.235 45966.9 1.0 3762 3483 7232 DOHH2_400M_050219_1,7247 DOHH2_400M_050219_1,7247,SQMKAVQMF False False QENSVYLSY 40.432413 551.75694578886 1517665.375 7232.0 ENSG00000096872|ENST00000380062|IFT74;;nc|ENSG00000096872|Q96LB3-2|IFT74 2.6311585505803428 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7248 40.437 229.0 337950.0 25 0 42646.0 24655 MLRTTSPSL 9 98 503.2722644719863 1004.5299760107728 2 503.2740356326103 MULTI CID FTMS 0 0 0 7232 181035.84375 1.0 0 0.0 16 Unmodified _MLRTTSPSL_ ENST00000534472.5_1_11:125479379-125479505:+|nuORF 19.256988751693697 0.3154191944385105 1 M{I|L}{I|L}Y 4 7 52.691 0.0 0.0 5.2453 0.0 0.0 0.0 481.24521814517817 481.24521814517817 40.47228775315752 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 M{I|L}{I|L}Y 5.2453 - 74 + 1 2.235 62810.0 1.0 3763 3483 7232 DOHH2_400M_050219_1,7248 DOHH2_400M_050219_1,7248,MLRTTSPSL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7250 40.441 46.0 909050.0 25 0 182600.0 16480 KAKATSSA 8 71 382.2201137279208 762.4256745226417 2 382.2196533083916 MULTI CID FTMS 0 0 0 7249 1034893.375 0.3606107895236825 2 -0.1901779174804687 1 Unmodified _KAKATSSA_ ENSG00000160392|ENST00000683109|C19orf47;ENST00000582734.1_1_19:40827791-40830098:-|nuORF;ENST00000584868.1_1_19:40827171-40828232:-|nuORF;nc|nan|Q8N9M1-2|C19orf47;nc|nan|Q8N9M1-3|C19orf47;nc|nan|Q8N9M1|C19orf47 0.6903765706972694 0.8201419426409876 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.235 40772.9 1.0 3764 3484 7249 DOHH2_400M_050219_1,7250 DOHH2_400M_050219_1,7250,KAKATSSA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7251 40.443 45.0 1039600.0 25 0 205390.0 + 34973 SQLKQPGR 8 74 457.2644018435216 912.5142507538432 2 457.2643615603447 MULTI CID FTMS 0 0 0 7249 1050392.25 0.6352722009359508 7 -0.585723876953125 2 Unmodified _SQLKQPGR_ REV__ENST00000559195.5_1_14:103592737-103596345:+|nuORF 2.302733041254933 0.8103549651115762 1 R 1 -1 1.5938 0.0 0.0 0.17466 0.0 0.0 474.2508057848963 279.1455477350219 753.3963535199182 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.17466 + + 2 + 1 2.235 42093.1 1.0 3765 3484 7249 DOHH2_400M_050219_1,7251 DOHH2_400M_050219_1,7251,SQLKQPGR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7252 40.444 38.0 1627800.0 25 0 367770.0 + 42854 VVLGPPAA 8 87 362.2225275320599 722.4305021309198 2 362.2221252322197 MULTI CID FTMS 0 0 0 7249 1779625.75 0.2273139438468854 -2 0.2161865234375 3 Unmodified _VVLGPPAA_ REV__ENST00000468758.1_1_2:134877558-135010718:+|nuORF;REV__ENST00000481801.5_1_2:134877633-135011843:+|nuORF 0.0 0.8243325171867699 1 P 1 -1 9.2082 0.0 0.0 1.2746 0.0 0.0 607.3664971644143 0.0 607.3664971644143 0.0 9.208187539523747 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.2746 + + 1 + 1 2.235 51915.2 1.0 3766 3484 7249 DOHH2_400M_050219_1,7252 DOHH2_400M_050219_1,7252,VVLGPPAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7253 40.445 43.0 1138600.0 25 0 168910.0 + 13767 HSDPSILGY 9 60 494.7404145209297 987.4662761086596 2 494.7404662966728 MULTI CID FTMS 0 0 0 7249 1465641.375 1.0 0 0.0 4 Unmodified _HSDPSILGY_ ENSG00000146830|ENST00000678049|GIGYF1 60.38955033654506 0.025866396858536 1 [HS]D[PS]{I|L}{I|L}GY 9 0 + 49.415 0.0 0.0 5.0042 5.0042 79.069 0.0 0.0 0.0 3.748162098248997 23.429089686793816 3.748162098248997 4.247425010840047 0 1.274227503252014 0.0 1.6549471895720984 0.0 + + [HS]D[PS]{I|L}{I|L}GY;[HS]D{I|L}[PS]{I|L}GY;{[YC]|[HE]}{I|L}R[RD]Y;{[YC]|[HE]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GY;[HS]D{I|L}[VG]{I|L}[{M(Oxidation (M))|F}T] 5.0042;4.5741;4.1738;3.327;1.68 +;-;-;-;- + 107 1 2.235 44939.3 1.0 3767 3484 7249 DOHH2_400M_050219_1,7253 DOHH2_400M_050219_1,7253,HSDPSILGY True True HSDPSILGY 40.444908 494.740466296673 37371660.0 7249.0 ENSG00000146830|ENST00000678049|GIGYF1 8.791986783345541 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7254 40.449 199.0 514300.0 25 0 45399.0 + 45348 YSQDYQQFY 9 126 621.2592445698272 1240.5039362064542 2 621.2588378787041 MULTI CID FTMS 0 0 0 7249 344386.75 0.5335892150095558 1 -0.1090087890625 5 Unmodified _YSQDYQQFY_ ENSG00000003756|ENST00000347869|RBM5;ENST00000441812.6_1_3:50144918-50150831:+|nuORF;ENST00000489437.1_1_3:50144918-50148299:+|nuORF;ENST00000494360.5_1_3:50144211-50147205:+|nuORF 41.8396318013385 0.0653578398400075 1 EE{I|L}A{I|L} 5 9 42.413 0.0 0.0 3.419 0.0 0.0 0.0 682.1911670016292 682.1911670016292 0.3387705964968717 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.6382104921644451 0.0 EE{I|L}A{I|L} 3.419 - 796 1 2.235 78677.9 1.0 3768 3484 7249 DOHH2_400M_050219_1,7254 DOHH2_400M_050219_1,7254,YSQDYQQFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7255 40.452 175.0 299960.0 25 0 17510.0 + 13386 HLKLGEVSV 9 94 491.291087298362 980.567621663524 2 491.2910339236259 MULTI CID FTMS 0 0 0 7249 306583.53125 1.0 0 0.0 6 Unmodified _HLKLGEVSV_ ENSG00000132780|ENST00000350030|NASP;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP;nc|ENSG00000132780|P49321-4|NASP 30.63653989081413 0.1413794767160703 1 [H{I|L}][Q{I|L}][VS]VSV 9 3 + 23.891 0.0 0.0 2.4364 2.4364 81.123 0.0 0.0 0.0 3.457794164917022 2.134928107446189 2.134928107446189 23.89084444675824 0 1.048455006504028 1.3979400086720375 0.3494850021680094 0.0 [H{I|L}][Q{I|L}][VS]VSV 2.4364 - 46 1 2.235 47237.7 1.0 3769 3484 7249 DOHH2_400M_050219_1,7255 DOHH2_400M_050219_1,7255,HLKLGEVSV False True HLKLGEVSV 40.452136 491.291033923626 1360235.375 7249.0 nc|ENSG00000132780|P49321-3|NASP;;ENSG00000132780|ENST00000350030|NASP;;nc|ENSG00000132780|P49321-4|NASP;;nc|ENSG00000132780|P49321-2|NASP 1.4632070263226826 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7256 40.456 199.0 334090.0 25 0 43154.0 + 32472 SAIIIASGL 9 90 422.7607325400145 843.506912146829 2 422.7603942751884 MULTI CID FTMS 0 0 0 7249 304030.25 1.0 0 0.0 7 Unmodified _SAIIIASGL_ REV__ENST00000530859.1_1_11:108029671-108040846:-|nuORF 48.345845343767074 0.0439967357579942 1 {[SA]|[TG]}{I|L}{I|L}{I|L}{[QS]|[NT]}{I|L} 8 -1 + 58.465 0.0 0.0 6.9312 6.9312 95.923 0.0 0.0 0.0 34.82016661481893 12.417709976536637 12.417709976536637 58.4653291466698 0 0.805462187404089 2.0 1.1237125054200234 0.0 {[SA]|[TG]}{I|L}{I|L}{I|L}{[QS]|[NT]}{I|L} 6.9312 - 235 + 1 2.235 55503.3 1.0 3770 3484 7249 DOHH2_400M_050219_1,7256 DOHH2_400M_050219_1,7256,SAIIIASGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7257 40.47 800.0 387830.0 25 0 92172.0 + 1194 AIDHNQMFQY 10 139 633.7822568029605 1265.549960672721 2 633.7828246951103 MULTI CID FTMS 0 0 0 7249 234816.953125 1.0 0 0.0 8 Unmodified _AIDHNQMFQY_ ENSG00000087502|ENST00000360150|ERGIC2 55.50274090549119 0.048383292844968 1 [{I|L}A][HD]NQM{M(Oxidation (M))|F}QY 10 0 + 60.481 0.0 0.0 4.779 4.779 73.332 0.0 0.0 0.0 0.523301596867185 16.53212513775344 0.523301596867185 0.523301596867185 0 0.8494850021680094 1.2218487496163564 0.3252574989159953 1.110924374808178 + + [{I|L}A][HD]NQM{M(Oxidation (M))|F}QY;[AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QQM{M(Oxidation (M))|F}QY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}QQM{M(Oxidation (M))|F}QY;[AG]NHDMA{I|L}{M(Oxidation (M))|F}QY;[YE]{[ET]|[MV]}RM{M(Oxidation (M))|F}QY;[{I|L}A][HD]GGQM{M(Oxidation (M))|F}QY;[{I|L}A][HD]N[AG]M{M(Oxidation (M))|F}QY;[{I|L}A][HD]NQM{M(Oxidation (M))|F}[AG]Y;{[QN]|[E{I|L}]|[KN]}HDMA{I|L}{M(Oxidation (M))|F}QY;[AG]NHDM{I|L}A{M(Oxidation (M))|F}QY 4.779;4.7377;4.4549;4.3664;4.0932;4.0549;4.0549;4.0549;4.0513;4.0342 +;-;-;-;-;-;-;-;-;- + 3997 1 2.235 227711.5 0.8799999952316284 3771 3484 7249 DOHH2_400M_050219_1,7257 DOHH2_400M_050219_1,7257,AIDHNQMFQY True True AIDHNQMFQY 40.469771 633.78282469511 1349196.5 7249.0 ENSG00000087502|ENST00000360150|ERGIC2 7.748338381449382 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7258 40.476 372.0 265220.0 25 0 33600.0 + 45593 YVGPSLRM 8 119 461.7446880935096 0 461.7444640994072 PEAK CID FTMS 0 0 0 7249 170049.71875 1.0 0 0.0 9 Unmodified _YVGPSLRM_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 30.63653989081413 0.224386698648925 1 VGP[RD]V 6 4 24.952 0.0 0.0 2.7079 0.0 0.0 163.06101817745042 132.04587732486564 295.1068955023161 0.0 0.0 0.0 0.0 0 0.75 0.0 0.0 0.3807196863200844 VGP[RD]V 2.7079 - 60 + 1 2.235 81804.7 1.0 3772 3484 7249 DOHH2_400M_050219_1,7258 DOHH2_400M_050219_1,7258,YVGPSLRM False True YVGPSLRM 40.47646 461.744464099407 1218278.75 7249.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 2.4827378590901694 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7259 40.484 447.0 219050.0 25 0 20714.0 + 36581 TALLKSLSA 9 135 452.2795313575291 902.5445097818582 2 452.2787658572197 MULTI CID FTMS 0 0 0 7249 164537.421875 1.0 0 0.0 10 Unmodified _TALLKSLSA_ ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000556791.1_1_14:102499420-102503925:+|nuORF 32.78568957990786 0.1150597335874693 1 [TA]{I|L}{I|L}K{[TV]|[{I|L}S]}SA 9 0 + 51.493 0.0 0.0 5.7053 5.7053 89.022 0.0 0.0 0.0 22.98377709306984 4.252553554344836 4.252553554344836 12.772336398234003 0 0.9247425010840048 2.0 0.2614393726401688 0.0 + + [TA]{I|L}{I|L}K{[TV]|[{I|L}S]}SA;[TA]{I|L}{I|L}K{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;{I|L}{I|L}KS{I|L}S{[QD]|[EN]|[WG]|[KD]|[RS]};[K{I|L}]S{I|L}{I|L}S{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}K{I|L}{I|L}S{[QD]|[EN]|[WG]|[KD]|[RS]};[K{I|L}]{I|L}S{I|L}S{[QD]|[EN]|[WG]|[KD]|[RS]};{I|L}{I|L}KSS{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[K{I|L}]SS{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[K{I|L}]S{I|L}S{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}KS{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 5.7053;4.2902;2.7164;2.2485;2.1101;1.8445;1.5548;1.1171;1.0868;0.97872 +;-;-;-;-;-;-;-;-;- + 249 + 1 2.235 78999.7 1.0 3773 3484 7249 DOHH2_400M_050219_1,7259 DOHH2_400M_050219_1,7259,TALLKSLSA True True TALLKSLSA 40.484386 452.27876585722 868131.0625 7249.0 ENSG00000197102|ENST00000360184|DYNC1H1;;ENST00000556791.1_1_14:102499420-102503925:+|nuORF 4.358645518620809 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7260 40.492 409.0 336670.0 25 0 56333.0 + 40047 VGGGGRFH 8 135 393.7052228302752 785.3958927273503 2 393.7049438357353 MULTI CID FTMS 0 0 0 7249 162444.484375 0.8034170339498653 -1 0.1086578369140625 11 Unmodified _VGGGGRFH_ REV__ENSG00000042781|ENST00000307340|USH2A;REV__nc|ENSG00000042781|O75445-2|USH2A;REV__nc|ENSG00000042781|O75445-3|USH2A 0.7936320650641473 0.8195151834710337 1 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}TKY 6 -1 + 56.08 0.0 0.0 7.1404 7.1404 96.327 0.0 0.0 0.0 45.622600263328295 10.80198135264581 10.80198135264581 56.08017516893504 0 0.3807196863200844 2.0 0.3807196863200844 0.6861818737241735 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}TKY 7.1404 - 41 + 1 2.235 109849.2 1.0 3774 3484 7249 DOHH2_400M_050219_1,7260 DOHH2_400M_050219_1,7260,VGGGGRFH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7261 40.502 597.0 469180.0 25 0 58518.0 20707 LLSAAKVM 8 191 416.7517300076128 831.4889070820255 2 416.7520324587822 MULTI CID FTMS 0 0 0 7249 146637.5625 0.1457898310797291 -2 0.2161865234375 12 Unmodified _LLSAAKVM_ ENSG00000134780|ENST00000257215|DAGLA 36.04419817259434 0.3004715606373109 1 [{I|L}T]GAK{I|L}VM 8 4 + 65.062 0.0 0.0 7.8247 7.8247 81.469 0.0 0.0 0.0 0.116324156835617 16.409780573583305 0.116324156835617 0.116324156835617 0 1.0 0.5086383061657274 2.041235974569971 0.0 [{I|L}T]GAK{I|L}VM;{[TV]|[{I|L}S]}AAK{I|L}VM;[{I|L}A]SAK{I|L}VM;[{I|L}T]QK{I|L}VM;[QT]{I|L}K{I|L}VM;[{I|L}T]GA{I|L}KVM;{[TV]|[{I|L}S]}AA{I|L}KVM;[KA]GT{I|L}{I|L}VM;[Q{I|L}]TK{I|L}VM;[KQ]T{I|L}{I|L}VM 7.8247;7.8107;7.4998;7.2671;7.0492;6.747;6.733;6.7323;6.699;6.5557 -;-;-;-;-;-;-;-;-;- 1165 1 2.235 218301.9 1.0 3775 3484 7249 DOHH2_400M_050219_1,7261 DOHH2_400M_050219_1,7261,LLSAAKVM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7262 40.512 513.0 183520.0 25 0 21660.0 + 19071 LDQVRTRIQ 9 119 564.8276188760574 1127.640684818915 2 564.8276855349541 MULTI CID FTMS 0 0 0 7249 121958.1015625 1.0 0 0.0 13 Unmodified _LDQVRTRIQ_ REV__ENSG00000171914|ENST00000636159|TLN2 9.38312468134398 0.5871240394367778 1 D{I|L} 2 -1 41.211 0.0 0.0 3.6547 0.0 0.0 0.0 896.5075500679878 896.5075500679878 28.11243137115873 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 D{I|L} 3.6547 - 187 + 1 2.235 74566.2 1.0 3776 3484 7249 DOHH2_400M_050219_1,7262 DOHH2_400M_050219_1,7262,LDQVRTRIQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7263 40.526 800.0 108010.0 25 0 8417.9 -1 0 105 603.967411717614 1808.880405753042 3 604.2968017458916 MULTI CID FTMS 0 0 0 7249 78867.046875 0.0381907071247318 9 -0.7537117004394531 14 1 [H{I|L}][NP]{I|L}DE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L} 14 -1 45.829 0.0 0.0 2.5336 0.0 0.0 0.0 142.06136120366787 142.06136120366787 22.11766954431866 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}][NP]{I|L}DE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L} 2.5336 - 398 1 2.235 73745.2 0.4699999988079071 3777 3484 7249 DOHH2_400M_050219_1,7263 DOHH2_400M_050219_1,7263, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7264 40.535 474.0 557390.0 25 0 20527.0 -1 0 172 910.4226577449356 1818.8307625566708 2 910.419970691204 MULTI CID FTMS 0 0 0 7249 142146.796875 0.0363465247790633 -3 0.3318939208984375 15 1 NMPN{I|L}NADQRGD{M(Oxidation (M))|F}{I|L}SQ 16 -1 + 145.32 0.0 0.0 7.9899 7.9899 81.733 0.0 0.0 0.0 72.85825163453981 6.721425549984417 6.721425549984417 0.0565842292838283 0 3.3349666055014104 1.5228787452803376 0.9802046884880936 2.382913167396961 NMPN{I|L}NADQRGD{M(Oxidation (M))|F}{I|L}SQ;NMPN{I|L}NADQ[NP]TY{I|L}SQ;NMPN{I|L}NADH{[DS]|[MA]|[CV]|TT}TY{I|L}SQ;NMPN{I|L}NADQ[VG]GD{M(Oxidation (M))|F}{I|L}SQ;NMPN{I|L}GGADQRGD{M(Oxidation (M))|F}{I|L}SQ;NMPGG{I|L}NADQRGD{M(Oxidation (M))|F}{I|L}SQ;NMPN{I|L}NAD[AG]RGD{M(Oxidation (M))|F}{I|L}SQ;NMPN{I|L}GGADQ[NP]TY{I|L}SQ;NMPN{I|L}NAD[AG][NP]TY{I|L}SQ;NMPGG{I|L}NADQ[NP]TY{I|L}SQ 7.9899;7.9868;7.7244;7.4943;7.4943;7.4943;7.4943;7.4912;7.4912;7.4912 -;-;-;-;-;-;-;-;-;- 116032 + 1 2.235 171962.6 1.0 3778 3484 7249 DOHH2_400M_050219_1,7264 DOHH2_400M_050219_1,7264, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7265 40.54 224.0 276280.0 25 0 31769.0 + 34423 SLVSTLLEL 9 109 487.7910707870828 973.5675886409656 2 487.7763244509697 MULTI CID FTMS 0 0 0 7249 21156.296875 0.0254616407129002 -8 0.9499664306640624 16 Unmodified _SLVSTLLEL_ REV__ENSG00000065060|ENST00000192788|BLTP3A 12.531546534597751 0.4974689918368763 1 S{I|L} 2 -1 15.969 0.0 0.0 1.6403 0.0 0.0 755.4405114698703 0.0 755.4405114698703 0.0 9.503187623076954 0.0 0.0 0 0.0 0.0 0.5 0.0 S{I|L} 1.6403 + + 105 + 1 2.235 50759.4 1.0 3779 3484 7249 DOHH2_400M_050219_1,7265 DOHH2_400M_050219_1,7265,SLVSTLLEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7266 40.546 309.0 243210.0 25 0 14283.0 + 32863 SEHVFDHPW 9 114 577.2562158543828 1152.4978787755656 2 577.2588378787041 MULTI CID FTMS 0 0 0 7249 101789.4375 1.0 0 0.0 17 Unmodified _SEHVFDHPW_ ENSG00000101166|ENST00000355937|PRELID3B;ENST00000466051.1_1_20:57613469-57617839:-|nuORF;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 46.020951573049366 0.0490941689151868 1 V{[{M(Oxidation (M))|F}D]|MM}HPW 6 3 24.983 0.0 0.0 2.1677 0.0 0.0 353.13362319160314 0.0 353.13362319160314 0.0 11.488095514414152 0.0 0.0 0 1.5317183090963749 0.0 0.0 0.0 + V{[{M(Oxidation (M))|F}D]|MM}HPW 2.1677 + + 346 1 2.235 63506.4 1.0 3780 3484 7249 DOHH2_400M_050219_1,7266 DOHH2_400M_050219_1,7266,SEHVFDHPW True True SEHVFDHPW 40.545606 577.258837878704 620567.0 7249.0 ENST00000466051.1_1_20:57613469-57617839:-|nuORF;;ENSG00000101166|ENST00000355937|PRELID3B;;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 6.737343947092692 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7268 40.55 7.6 7627100.0 25 0 652570.0 + 35146 SRGDFVVEY 9 57 536.258797948199 1070.503042963198 2 536.2593261599541 MULTI CID FTMS 0 0 0 7267 6714356.5 0.5927793439109194 1 -0.0811691284179687 1 Unmodified _SRGDFVVEY_ ENSG00000183955|ENST00000402868|KMT5A;ENST00000437519.5_1_12:123868737-123892247:+|nuORF;nc|ENSG00000183955|Q9NQR1|KMT5A 28.49450938151212 0.1686335738423394 1 [YE][RN]VVEY 8 5 + 47.154 0.0 0.0 4.4048 4.4048 75.696 0.0 0.0 0.0 0.6998499381268886 36.18440000316717 0.6998499381268886 3.063025007672877 0 0.8494850021680094 0.0 0.3252574989159953 0.0 [YE][RN]VVEY;{[QD]|[EN]|[WG]|[KD]|[RS]}[DG]{M(Oxidation (M))|F}VVEY;[YE][RN]VEVY;{[QD]|[EN]|[WG]|[KD]|[RS]}[DG]{M(Oxidation (M))|F}VEVY 4.4048;4.1187;3.7971;3.511 -;+;-;- + 63 1 2.229 54368.8 1.0 3781 3485 7267 DOHH2_400M_050219_1,7268 DOHH2_400M_050219_1,7268,SRGDFVVEY False True SRGDFVVEY 40.550299 536.259326159954 187205940.0 7267.0 ENST00000437519.5_1_12:123868737-123892247:+|nuORF;;ENSG00000183955|ENST00000402868|KMT5A;;nc|ENSG00000183955|Q9NQR1|KMT5A 7.529016017913818 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7269 40.551 36.0 1074300.0 25 0 91031.0 + 4799 DENSVIKSF 9 70 519.7587765467014 1037.5030001602026 2 519.7589599490166 MULTI CID FTMS 0 0 0 7267 1237531.25 0.315011938014598 1 -0.0811691284179687 2 Unmodified _DENSVIKSF_ ENSG00000130935|ENST00000253247|NOL11 51.41523569358685 0.0372669606867193 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NSV{I|L}KS{M(Oxidation (M))|F} 9 0 + 63.109 0.0 0.0 6.0828 6.0828 88.317 0.0 0.0 0.0 52.39069071968309 14.973024840566469 14.973024840566469 9.208187539523747 0 1.1989700043360187 0.0 0.3494850021680094 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NSV{I|L}KS{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGSV{I|L}KS{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WN]|[YH]}{I|L}KS{M(Oxidation (M))|F} 6.0828;5.1953;3.195 +;-;- + 89 + 1 2.229 36810.8 1.0 3782 3485 7267 DOHH2_400M_050219_1,7269 DOHH2_400M_050219_1,7269,DENSVIKSF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7270 40.555 164.0 311150.0 25 0 115350.0 28099 PPLLKLAA 8 52 411.775031777404 821.535510621608 2 411.7746765017509 MULTI CID FTMS 0 0 0 7267 409086.15625 0.7870830722651392 -1 0.1090087890625 3 Unmodified _PPLLKLAA_ ENST00000528315.1_2_11:828276-828405:+|nuORF 0.0 0.8243325171867699 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.229 45636.5 1.0 3783 3485 7267 DOHH2_400M_050219_1,7270 DOHH2_400M_050219_1,7270,PPLLKLAA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7271 40.557 130.0 503690.0 25 0 51559.0 + 16723 KEWETIRSF 9 74 598.3086081126932 1194.6026632921862 2 598.3093139529228 MULTI CID FTMS 0 0 0 7267 354556.875 0.7534366380016201 -1 0.1090087890625 4 Unmodified _KEWETIRSF_ ENSG00000149313|ENST00000278618|AASDHPPT 47.594388314883695 0.0456443387682827 1 KEWET{I|L} 6 3 63.008 0.0 0.0 5.2744 0.0 0.0 0.0 405.1896761529906 405.1896761529906 25.049406363485858 0.0 0.0 0.0 0 0.805462187404089 0.0 1.2302046884880935 0.0 + KEWET{I|L} 5.2744 + + 228 + 1 2.229 53157.7 1.0 3784 3485 7267 DOHH2_400M_050219_1,7271 DOHH2_400M_050219_1,7271,KEWETIRSF True True KEWETIRSF 40.557358 598.309313952923 2585775.0 7267.0 ENSG00000149313|ENST00000278618|AASDHPPT 3.968672196070353 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7272 40.561 175.0 520350.0 25 0 57887.0 + 44133 YLDNVIGHSY 10 107 590.7845766063936 1179.554600279587 2 590.7848388552666 MULTI CID FTMS 0 0 0 7267 322211.59375 1.0 0 0.0 5 Unmodified _YLDNVIGHSY_ ENSG00000089195|ENST00000203001|TRMT6;ENST00000473131.5_1_20:5924535-5931132:-|nuORF;nc|ENSG00000089195|Q9UJA5-2|TRMT6;nc|ENSG00000089195|Q9UJA5-3|TRMT6 87.12335221954112 0.0112299488529474 1 Y{I|L}DNV{I|L}GHSY 10 0 + 110.85 0.0 0.0 9.3975 9.3975 96.174 0.0 0.0 0.0 88.45327093400881 24.32258126592544 24.32258126592544 12.971736348700103 0 1.3882104921644451 2.0 1.7856668758921828 0.3807196863200844 + + Y{I|L}DNV{I|L}GHSY;Y{I|L}DGGV{I|L}GHSY;Y{I|L}C(Carbamidomethyl (C))[PA]{I|L}GHSY;Y{I|L}DN[R{I|L}]HSY;Y{I|L}[CG][PA]{I|L}GHSY;Y{I|L}DGG[R{I|L}]HSY;Y{I|L}D[PS][KA]HSY;Y{I|L}D[QT]YKSY;Y{I|L}D[PS][Y{I|L}]{M(Oxidation (M))|F}Y;Y{I|L}D[PS][HA]KSY 9.3975;8.2978;6.872;6.666;6.0951;5.8854;5.7216;5.3223;4.9472;4.6536 +;-;-;-;-;-;-;-;-;- + 1495 + 1 2.229 72418.1 1.0 3785 3485 7267 DOHH2_400M_050219_1,7272 DOHH2_400M_050219_1,7272,YLDNVIGHSY True True YLDNVIGHSY 40.560776 590.784838855267 1931807.25 7267.0 ENSG00000089195|ENST00000203001|TRMT6;;nc|ENSG00000089195|Q9UJA5-3|TRMT6;;nc|ENSG00000089195|Q9UJA5-2|TRMT6;;ENST00000473131.5_1_20:5924535-5931132:-|nuORF 9.30519406000773 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7273 40.565 204.0 323650.0 25 0 19106.0 + 25412 NEASVLHNL 9 102 498.7591895469202 995.5038261606404 2 498.7591735720634 MULTI CID FTMS 0 0 0 7267 261789.3125 0.8819190270196634 -1 0.1090087890625 6 Unmodified _NEASVLHNL_ ENSG00000078814|ENST00000262873|MYH7B;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000078814|A7E2Y1-2|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11 40.72490554402381 0.0714771638475563 1 {[QD]|[EN]|[WG]|[KD]|[RS]}ASV{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 46.29 0.0 0.0 4.6499 4.6499 78.587 0.0 0.0 0.0 7.147642715192504 5.070071809000609 5.070071809000609 5.070071809000609 0 1.0 0.0 0.0 0.5866968715561641 + + {[QD]|[EN]|[WG]|[KD]|[RS]}ASV{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};{[QD]|[EN]|[WG]|[KD]|[RS]}ASV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}H 4.6499;4.1406 +;- + 156 + 1 2.229 56392.1 1.0 3786 3485 7267 DOHH2_400M_050219_1,7273 DOHH2_400M_050219_1,7273,NEASVLHNL True True NEASVLHNL 40.564666 498.759173572063 1576208.625 7267.0 nc|ENSG00000078814|A7E2Y1-2|MYH7B;;ENSG00000100345|ENST00000216181|MYH9;;nc|ENSG00000133026|P35580-3|MYH10;;nc|ENSG00000133026|P35580-5|MYH10;;ENSG00000105357|ENST00000642316|MYH14;;ENSG00000078814|ENST00000262873|MYH7B;;nc|ENSG00000133392|P35749-4|MYH11;;nc|ENSG00000133026|P35580-2|MYH10;;nc|ENSG00000105357|Q7Z406-4|MYH14;;nc|ENSG00000105357|Q7Z406-5|MYH14;;nc|ENSG00000105357|Q7Z406-6|MYH14;;nc|ENSG00000133026|P35580|MYH10;;nc|ENSG00000133392|P35749-2|MYH11;;ENSG00000133026|ENST00000360416|MYH10;;nc|ENSG00000133392|P35749-3|MYH11;;nc|ENSG00000105357|Q7Z406|MYH14;;nc|ENSG00000078814|A7E2Y1|MYH7B;;ENSG00000133392|ENST00000300036|MYH11 6.853412469228108 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7274 40.569 223.0 258620.0 25 0 34423.0 + 30781 RIEDNSLLY 9 78 561.7923655646856 0 561.7928954958916 PEAK CID FTMS 0 0 0 7267 238047.640625 1.0 0 0.0 7 Unmodified _RIEDNSLLY_ ENSG00000174842|ENST00000370360|GLMN;nc|ENSG00000174842|Q92990-2|GLMN 20.41453444215458 0.197313647343139 1 {I|L}{I|L}SN 4 7 31.67 0.0 0.0 2.8237 0.0 0.0 181.0741622823993 510.2332857721312 691.3074480545306 0.0 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 {I|L}{I|L}SN 2.8237 - 34 + 1 2.229 50977.4 1.0 3787 3485 7267 DOHH2_400M_050219_1,7274 DOHH2_400M_050219_1,7274,RIEDNSLLY False True RIEDNSLLY 40.568887 561.792895495892 1510345.875 7267.0 nc|ENSG00000174842|Q92990-2|GLMN;;ENSG00000174842|ENST00000370360|GLMN 6.080484867095947 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7275 40.575 337.0 257840.0 25 0 35738.0 + 4844 DFLVWLLL 8 123 509.8041028746115 0 509.8042480349541 PEAK CID FTMS 0 0 0 7267 225902.25 0.8182379399733912 -2 0.2176666259765625 8 Unmodified _DFLVWLLL_ REV__ENSG00000154162|ENST00000382254|CDH12;REV__nc|ENSG00000154162|P55289-2|CDH12 6.354104778181461 0.5763711549229614 1 {I|L} 1 -1 6.9897 0.0 0.0 0.68689 0.0 0.0 262.102149985748 639.3821505182249 901.4843005039728 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.68689 + + 16 + 1 2.229 72479.3 1.0 3788 3485 7267 DOHH2_400M_050219_1,7275 DOHH2_400M_050219_1,7275,DFLVWLLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7276 40.581 349.0 330180.0 25 0 34052.0 + 20696 LLRPSVQSL 9 116 506.8118114330661 0 506.8121520876884 PEAK CID FTMS 0 0 0 7267 191184.71875 0.4680988086949203 -2 0.2176666259765625 9 Unmodified _LLRPSVQSL_ REV__ENSG00000003393|ENST00000264276|ALS2;REV__ENST00000482789.5_1_2:202606311-202633608:-|nuORF;REV__ENST00000482891.5_1_2:202587756-202633608:-|nuORF;REV__nc|ENSG00000003393|Q96Q42-3|ALS2 52.268347100219714 0.0254642048063414 1 SN{I|L}S 4 -1 29.021 0.0 0.0 2.8688 0.0 0.0 131.0938145541425 476.30039392642817 607.3942084805707 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 1.2134679910804405 0.0 SN{I|L}S 2.8688 - 129 + 1 2.229 90484.4 1.0 3789 3485 7267 DOHH2_400M_050219_1,7276 DOHH2_400M_050219_1,7276,LLRPSVQSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7277 40.593 672.0 194860.0 25 0 9511.5 40210 VGRFFRWM 8 207 366.8618414627182 1097.5636949883549 3 366.8608581423759 MULTI CID FTMS 0 0 0 7267 97183.25 1.0 0 0.0 10 Unmodified _VGRFFRWM_ ENSG00000166016|ENST00000435224|ABTB2;nc|ENSG00000166016|Q8N961-2|ABTB2 2.889219685676258 0.8067950007271085 1 {[DS]|[MA]|[CV]|TT}[Q{I|L}][WR]YM 8 5 {[DS]|[MA]|[CV]|TT}[Q{I|L}][WR]Y + + 13.979 -11.658 -1.229 1.2737 1.2737 48.415 0.0 0.0 0.0 0.0 -12.21848749616356 -12.21848749616356 0.0 0 0.0 0.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}[Q{I|L}][WR]YM 1.2737 - 72 + 1 2.229 104776.4 1.0 3790 3485 7267 DOHH2_400M_050219_1,7277 DOHH2_400M_050219_1,7277,VGRFFRWM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7278 40.607 800.0 98770.0 25 0 6873.5 + -1 FSEPEYSAEYSAEY 14 116 836.3382998630934 1670.6620467929868 2 836.3386108279228 MULTI CID FTMS 0 0 0 7267 89315.40625 0.8496270071524792 -2 0.2176666259765625 11 3 Oxidation (M) _M(Oxidation (M))HCM(Oxidation (M))WWERWM(Oxidation (M))K_ ENSG00000138031|ENST00000679454|ADCY3 0.0 0.8751479354844584 1 [YE]ASEPYAE 9 -1 47.268 0.0 0.0 2.8293 0.0 0.0 0.0 628.2257414990378 628.2257414990378 23.111498397386526 0.0 0.0 0.0 0 0.0 0.0 2.173877368056628 0.0 [YE]ASEPYAE 2.8293 - 3761 1 2.229 57210.5 0.5400000214576721 3791 3485 7267 DOHH2_400M_050219_1,7278 DOHH2_400M_050219_1,7278,MHCMWWERWMK False False FSEPEYSAEYSAEY 40.606826 836.338610827923 1032439.75 7267.0 ENSG00000138031|ENST00000679454|ADCY3 5.866039117177327 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7279 40.621 800.0 148530.0 25 0 8140.1 + 33097 KELERLTSLY 10 153 626.3517116232035 1250.688870313207 2 626.3527709841728 MULTI CID FTMS 0 0 0 7267 113264.6328125 1.0 0 0.0 12 Unmodified _SESKGKVQLLY_ nc|ENSG00000164031|Q8TBM8-2|DNAJB14;ENSG00000164031|ENST00000442697|DNAJB14 39.94969957227396 0.2131707853268865 1 KE{I|L}E 4 9 37.18 0.0 0.0 2.9728 0.0 0.0 0.0 748.4007052057249 748.4007052057249 8.156753288559813 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 KE{I|L}E 2.9728 - 508 + 1 2.229 94709.5 0.6200000047683716 3792 3485 7267 DOHH2_400M_050219_1,7279 DOHH2_400M_050219_1,7279,SESKGKVQLLY False True KELERLTSLY 40.620657 626.352770984173 770826.9375 7267.0 nc|ENSG00000164031|Q8TBM8-2|DNAJB14;;ENSG00000164031|ENST00000442697|DNAJB14 6.025692145029704 2.0 False 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7280 40.627 244.0 284050.0 25 0 26182.0 40702 VLGGASAHR 9 108 434.242662895386 866.470772857572 2 434.2421447634697 MULTI CID FTMS 0 0 0 -1 0 13 Unmodified _VLGGASAHR_ ENSG00000064687|ENST00000263094|ABCA7;ENST00000526885.5_1_19:1041282-1042570:+|nuORF 5.230669730166228 0.7320841359114558 1 {I|L}{[{M(Oxidation (M))|F}H]|[RQ]} 3 7 2.6761 0.0 0.0 0.30885 0.0 0.0 451.24593145876383 0.0 451.24593145876383 0.0 -9.419175938496023 -9.419175938496023 0.0 0 0.0 0.0 0.0 0.0 {I|L}{[{M(Oxidation (M))|F}H]|[RQ]} 0.30885 - 8 + 1 2.229 55165.9 1.0 3793 3485 7267 DOHH2_400M_050219_1,7280 DOHH2_400M_050219_1,7280,VLGGASAHR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7282 40.631 16.0 2780700.0 25 0 310530.0 + 12442 GTVYEDLRY 9 71 558.2720618531396 1114.529570773079 2 558.2724487185478 MULTI CID FTMS 0 0 0 7281 2632047.0 0.1563000751082085 2 -0.1257133483886718 1 Unmodified _GTVYEDLRY_ chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-2|UBE2C 38.17557092003332 0.0854718145212029 1 {[SA]|[TG]}VYEDY[R{I|L}] 9 2 + 59.982 0.0 0.0 5.3818 5.3818 90.529 0.0 0.0 0.0 37.975248928895205 4.137342758552691 4.137342758552691 39.69273760456403 0 0.5891368308784531 1.3979400086720375 0.4247425010840047 0.0 {[SA]|[TG]}VYEDY[R{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE[R{M(Oxidation (M))|F}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.3818;1.8204 -;- 64 + 1 2.229 43921.7 1.0 3794 3486 7281 DOHH2_400M_050219_1,7282 DOHH2_400M_050219_1,7282,GTVYEDLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7283 40.633 82.0 670080.0 25 0 142300.0 16043 ITKGTELQI 9 76 501.7946599745563 1001.5747670159126 2 501.2905151247978 MULTI CID FTMS 0 0 0 7281 730061.5 0.9195348804988748 -1 0.0811691284179687 2 Unmodified _ITKGTELQI_ ENSG00000174718|ENST00000312561|RESF1 3.5964929083625545 0.7891324200061827 1 {I|L} 1 8 10.379 0.0 0.0 1.0362 0.0 0.0 870.479840113372 0.0 870.479840113372 0.0 9.409503439610027 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0362 + + 3 + 1 2.229 47647.4 1.0 3795 3486 7281 DOHH2_400M_050219_1,7283 DOHH2_400M_050219_1,7283,ITKGTELQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7284 40.635 58.0 914310.0 25 0 204790.0 + 27521 PKQPFVKN 8 80 479.27752848024926 956.5405040272984 2 479.2775146365166 MULTI CID FTMS 0 0 0 7281 973941.9375 0.4706831546881979 -4 0.4063644409179687 3 Unmodified _PKQPFVKN_ REV__ENSG00000147124|ENST00000684689|ZNF41;REV__nc|ENSG00000147124|P51814-2|ZNF41;REV__nc|ENSG00000147124|P51814-3|ZNF41;REV__nc|ENSG00000147124|P51814-4|ZNF41;REV__nc|ENSG00000147124|P51814-5|ZNF41;REV__nc|ENSG00000147124|P51814-7|ZNF41;REV__nc|ENSG00000147124|P51814-8|ZNF41;REV__nc|ENSG00000147124|P51814|ZNF41 2.302733041254933 0.8103549651115762 1 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.57337 0.0 0.0 359.2021384040548 447.2361544244751 806.4382928285298 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.57337 + + 1 + 1 2.229 46283.3 1.0 3796 3486 7281 DOHH2_400M_050219_1,7284 DOHH2_400M_050219_1,7284,PKQPFVKN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7285 40.638 165.0 588860.0 25 0 57379.0 44306 YLLTRRLAF 9 109 384.9013302130082 1151.6821612392248 3 384.9010497927666 MULTI CID FTMS 0 0 0 7281 281094.65625 1.0 0 0.0 4 Unmodified _YLLTRRLAF_ ENST00000557431.5_1_14:78177213-78182211:+|nuORF 29.84058131909904 0.1515068451768857 1 {I|L}KA{I|L}Y{M(Oxidation (M))|F} 6 6 30.623 0.0 0.0 2.6589 0.0 0.0 398.239549705275 0.0 398.239549705275 0.0 23.632900219968107 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}KA{I|L}Y{M(Oxidation (M))|F} 2.6589 - 103 1 2.229 83025.9 1.0 3797 3486 7281 DOHH2_400M_050219_1,7285 DOHH2_400M_050219_1,7285,YLLTRRLAF False True RNKLKYLAF 40.637999 384.901049792767 1755179.875 7281.0 ENST00000472481.5_1_19:49990877-49994169:+|nuORF;;ENSG00000142541|ENST00000391857|RPL13A 4.361450672149658 3.0 False 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7286 40.642 203.0 287910.0 25 0 22845.0 + 23356 LTDIHGNVLQY 11 90 636.8329652931345 1271.651377653069 2 636.8325073122978 MULTI CID FTMS 0 0 0 7281 263731.34375 1.0 0 0.0 5 Unmodified _LTDIHGNVLQY_ ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-3|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1 57.24910588100465 0.0803095280301687 1 [{I|L}T]D[H{I|L}]GNV{I|L}QY 11 0 + 67.585 0.0 0.0 5.3147 5.3147 82.713 0.0 0.0 0.0 7.117155682743842 16.57577319177794 7.117155682743842 7.117155682743842 0 0.8807196863200843 1.5228787452803376 0.3494850021680094 0.7614393726401688 + + [{I|L}T]D[H{I|L}]GNV{I|L}QY;[YQ][KT]DT{I|L}{I|L}QY;[{I|L}T]D[H{I|L}]GNVQ{I|L}Y;[{I|L}T]D[H{I|L}]GNV{I|L}[AG]Y;[YQ][KC]{I|L}T{I|L}{I|L}QY;{[ES]|[DT]|[{I|L}C]}{I|L}[H{I|L}]GNV{I|L}QY;[YQ][KT]{[ET]|[MV]}V{I|L}QY;[YQ][KT]DT{I|L}Q{I|L}Y;[YQ][KT]DT{I|L}{I|L}[AG]Y;[{I|L}T]D[H{I|L}]GGGV{I|L}QY 5.3147;4.755;4.6401;4.5969;4.5183;4.1794;4.1358;4.0804;4.0344;3.9981 +;-;-;-;-;-;-;-;-;- + 678 1 2.229 51054.8 1.0 3798 3486 7281 DOHH2_400M_050219_1,7286 DOHH2_400M_050219_1,7286,LTDIHGNVLQY True True LTDIHGNVLQY 40.641888 636.832507312298 1456054.375 7281.0 nc|ENSG00000162813|O95861-2|BPNT1;;ENSG00000162813|ENST00000322067|BPNT1;;nc|ENSG00000162813|O95861-3|BPNT1;;nc|ENSG00000162813|O95861-4|BPNT1 6.746692339579265 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7287 40.646 206.0 298860.0 25 0 25634.0 + 38578 TTDFPGNYSGY 11 101 611.2567360477443 1220.4989191622883 2 611.2564575076103 MULTI CID FTMS 0 0 0 7281 231728.3125 0.1642300931884819 9 -0.7418975830078125 6 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 36.506200033944 0.2662161991516171 1 SGY 3 8 25.802 0.0 0.0 2.1141 0.0 0.0 895.371765697248 0.0 895.371765697248 0.0 6.332946754800375 0.0 0.0 0 0.5 0.0 0.0 0.0 + SGY 2.1141 + + 308 + 1 2.229 49451.4 1.0 3799 3486 7281 DOHH2_400M_050219_1,7287 DOHH2_400M_050219_1,7287,TTDFPGNYSGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7288 40.651 308.0 280220.0 25 0 22042.0 + + 35709 GEVSGLTKDF 10 120 527.2643446702907 1052.514136407381 2 526.7668334841728 MULTI CID FTMS 0 0 0 7281 171421.8125 0.6131665135286792 -1 0.0811691284179687 7 Unmodified _SVGTIGSSQFA_ nc|ENSG00000145996|Q5VV42-2|CDKAL1;ENSG00000145996|ENST00000274695|CDKAL1 32.78568957990786 0.3235288296534633 1 VSG{I|L}TKD{M(Oxidation (M))|F} 8 -1 44.875 0.0 0.0 4.2636 0.0 0.0 187.0580950028876 0.0 187.0580950028876 0.0 -0.2276612935632371 -0.2276612935632371 0.0 0 0.0 0.0 0.3807196863200844 0.0 VSG{I|L}TKD{M(Oxidation (M))|F} 4.2636 - 2035 + 1 2.229 72268.8 1.0 3800 3486 7281 DOHH2_400M_050219_1,7288 DOHH2_400M_050219_1,7288,SVGTIGSSQFA False False GEVSGLTKDF 40.651459 526.766833484173 1305572.875 7281.0 nc|ENSG00000145996|Q5VV42-2|CDKAL1;;ENSG00000145996|ENST00000274695|CDKAL1 4.482720851898193 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7289 40.657 315.0 336980.0 25 0 37073.0 16787 KGKGLIAA 8 150 379.2489560262133 756.4833591192265 2 379.2481872439384 MULTI CID FTMS 0 0 0 7281 167796.328125 0.9718133395593298 1 -0.0796699523925781 8 Unmodified _KGKGLIAA_ ENST00000586783.5_1_19:14000644-14000983:-|nuORF 0.0 0.8243325171867699 1 P 1 8 11.99 0.0 0.0 1.5849 0.0 0.0 641.4194380760609 0.0 641.4194380760609 0.0 2.7815125038364386 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.5849 - 22 + 1 2.229 87818.6 1.0 3801 3486 7281 DOHH2_400M_050219_1,7289 DOHH2_400M_050219_1,7289,KGKGLIAA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7290 40.671 800.0 176630.0 25 0 32181.0 -1 0 123 655.6574518531851 1963.950526159755 3 655.9921752810478 MULTI CID FTMS 0 0 0 7281 92429.0703125 1.0 0 0.0 9 1 [YE]ET[H{I|L}]G{M(Oxidation (M))|F}KEEAEA{I|L}KA 17 -1 + 71.427 0.0 0.0 3.6369 3.6369 70.087 0.0 0.0 0.0 5.30726239543597 9.762044648360389 5.30726239543597 0.9860979788595046 0 0.0 1.6989700043360187 0.5752574989159953 0.0 [YE]ET[H{I|L}]G{M(Oxidation (M))|F}KEEAEA{I|L}KA;[YE]ET[H{I|L}]QQ{I|L}EYEA{I|L}KA;[YE]ET[H{I|L}]KQ{I|L}EYEA{I|L}QA;[YE]ET[H{I|L}]GAQ{I|L}EYEA{I|L}KA;[YE]E{I|L}[HT]G{M(Oxidation (M))|F}KEEAEA{I|L}KA;[YE]E{I|L}[HT]KQ{I|L}EYEA{I|L}QA;[YE]E{I|L}[HT]QQ{I|L}EYEA{I|L}KA;[YE]E{I|L}[HT]GAQ{I|L}EYEA{I|L}KA;[QA]YC(Carbamidomethyl (C))[H{I|L}]G{M(Oxidation (M))|F}KEEAEA{I|L}KA;[QA]YC(Carbamidomethyl (C))[H{I|L}]QQ{I|L}EYEA{I|L}KA 3.6369;3.5867;3.5867;3.5733;3.533;3.4828;3.4828;3.4694;3.3667;3.3165 -;-;-;-;-;-;-;-;-;- 7354 1 2.229 109823.4 0.5699999928474426 3802 3486 7281 DOHH2_400M_050219_1,7290 DOHH2_400M_050219_1,7290, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7291 40.685 800.0 150660.0 25 0 9153.0 + 6897 EEFDRFTGY 9 147 582.2545568518848 1162.4945607705697 2 582.2546874880791 MULTI CID FTMS 0 0 0 7281 89439.453125 0.8404173482489963 -1 0.0811691284179687 10 Unmodified _EEFDRFTGY_ ENSG00000142002|ENST00000262960|DPP9;ENST00000597145.5_1_19:4685559-4714096:-|nuORF;ENST00000601764.5_1_19:4697564-4723732:-|nuORF;nc|ENSG00000142002|Q86TI2-4|DPP9;nc|ENSG00000142002|Q86TI2|DPP9 67.83816525789305 0.0219346420158844 1 EE{M(Oxidation (M))|F}DR{M(Oxidation (M))|F}TGY 9 0 + 81.516 0.0 0.0 7.0121 7.0121 88.667 0.0 0.0 0.0 51.68275533390678 16.478174818886373 16.478174818886373 7.794475308224534 0 1.468288639837704 1.5228787452803376 0.0 0.0 + + EE{M(Oxidation (M))|F}DR{M(Oxidation (M))|F}TGY;EEV[HS]QNTGY;EE{M(Oxidation (M))|F}D[WK]{M(Oxidation (M))|F}Y;EEV[HS]QGGTGY;EEV[HS][AG]NTGY;EE[HT]{[NV]|[RG]}NTGY;EH[WE]KNTGY;[QA]GT[HS]QNTGY;EH[WE]KGGTGY;[QA]TG[HS]QNTGY 7.0121;6.3416;5.8047;5.5533;5.5533;4.9148;4.8226;4.1279;4.0305;3.4849 +;-;-;-;-;-;-;-;-;- + 1797 + 1 2.229 90920.1 0.5299999713897705 3803 3486 7281 DOHH2_400M_050219_1,7291 DOHH2_400M_050219_1,7291,EEFDRFTGY True True EEFDRFTGY 40.684863 582.254687488079 624800.3125 7281.0 nc|ENSG00000142002|Q86TI2|DPP9;;ENSG00000142002|ENST00000262960|DPP9;;ENST00000601764.5_1_19:4697564-4723732:-|nuORF;;ENST00000597145.5_1_19:4685559-4714096:-|nuORF;;nc|ENSG00000142002|Q86TI2-4|DPP9 8.072813828786215 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7292 40.688 186.0 477250.0 25 0 80553.0 11357 GFRVLGTKP 9 113 487.7910707870828 973.5675886409656 2 487.7910034060478 MULTI CID FTMS 0 0 0 7281 391342.5 0.4709813910043358 -6 0.6372184753417969 11 Unmodified _GFRVLGTKP_ ENSG00000144837|ENST00000273371|PLA1A;nc|ENSG00000144837|Q53H76-2|PLA1A;nc|ENSG00000144837|Q53H76-3|PLA1A 4.3292370932331545 0.7635526921153418 1 {I|L} 1 8 10.181 0.0 0.0 1.0457 0.0 0.0 842.4726769972141 0.0 842.4726769972141 0.0 5.404763869990815 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0457 + + 29 + 1 2.229 71978.4 1.0 3804 3486 7281 DOHH2_400M_050219_1,7292 DOHH2_400M_050219_1,7292,GFRVLGTKP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7293 40.698 519.0 284210.0 25 0 81447.0 + -1 AEFAAERDW 9 110 547.3334597429468 546.3261832763468 1 547.3334838747978 MULTI CID FTMS 0 0 0 7281 160803.46875 1.0 0 0.0 12 ENSG00000179958|ENST00000319285|DCTPP1 1 Y 1 -1 12.218 0.0 0.0 2.2365 0.0 0.0 365.2518709978296 0.0 365.2518709978296 0.0 2.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.2365 - 36 + 1 2.229 114542.0 1.0 3805 3486 7281 DOHH2_400M_050219_1,7293 DOHH2_400M_050219_1,7293, False False AEFAAERDW 40.697593 547.333483874798 368211.28125 7281.0 ENSG00000179958|ENST00000319285|DCTPP1 3.9115548928578696 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7294 40.706 425.0 196230.0 25 0 7205.8 -1 0 97 729.3322455907262 2184.9749073723783 3 729.6656982302666 MULTI CID FTMS 0 0 0 7281 128501.6328125 1.0 0 0.0 13 1 [NS]{I|L}C{I|L}RQD 8 -1 38.841 0.0 0.0 1.7776 0.0 0.0 0.0 1252.5250381067517 1252.5250381067517 7.057430236005814 0.0 0.0 0.0 0 0.0 0.0 1.329689690656103 0.5189301784845296 [NS]{I|L}C{I|L}RQD 1.7776 - 1260 1 2.229 69263.6 1.0 3806 3486 7281 DOHH2_400M_050219_1,7294 DOHH2_400M_050219_1,7294, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7296 40.711 11.0 4527700.0 25 0 1033700.0 + 42855 VVLGPPAA 8 72 362.2225275320599 722.4305021309198 2 362.2221862673759 MULTI CID FTMS 0 0 0 7295 5192118.5 0.6631961428718228 1 -0.0460433959960937 1 Unmodified _VVLGPPAA_ REV__ENST00000468758.1_1_2:134877558-135010718:+|nuORF;REV__ENST00000481801.5_1_2:134877633-135011843:+|nuORF 0.0 0.8243325171867699 1 C(Carbamidomethyl (C))W 2 -1 7.9588 0.0 0.0 1.1017 0.0 0.0 200.20315945689475 173.08252893619377 373.28568839308855 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))W 1.1017 - 5 + 1 2.229 47536.5 1.0 3807 3487 7295 DOHH2_400M_050219_1,7296 DOHH2_400M_050219_1,7296,VVLGPPAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7297 40.713 89.0 631720.0 25 0 131300.0 37365 TKRALPNN 8 89 457.2644018435216 912.5142507538432 2 457.2642700076103 MULTI CID FTMS 0 0 0 7295 560861.8125 0.3392065374128584 10 -0.8603172302246094 2 Unmodified _TKRALPNN_ ENSG00000141510|ENST00000269305|TP53;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;nc|ENSG00000141510|P04637-7|TP53;nc|ENSG00000141510|P04637-8|TP53;nc|ENSG00000141510|P04637-9|TP53 4.75600775471527 0.7954636275367004 1 R 1 7 1.5938 0.0 0.0 0.17466 0.0 0.0 474.2499818102869 279.1448763483032 753.3948581585901 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.17466 + + 6 + 1 2.229 48814.0 1.0 3808 3487 7295 DOHH2_400M_050219_1,7297 DOHH2_400M_050219_1,7297,TKRALPNN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7298 40.717 180.0 255890.0 25 0 22416.0 9147 FFVLAYAL 8 87 472.26980211483175 942.5250512964636 2 472.2700683474541 MULTI CID FTMS 0 0 0 7295 361954.625 0.6414578602837744 -3 0.2698478698730469 3 Unmodified _FFVLAYAL_ ENSG00000162728|ENST00000368088|KCNJ9 2.889219685676258 0.8067950007271085 1 {I|L} 1 7 10.837 0.0 0.0 1.1498 0.0 0.0 811.430139652712 0.0 811.430139652712 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1498 + + 7 + 1 2.229 42507.5 1.0 3809 3487 7295 DOHH2_400M_050219_1,7298 DOHH2_400M_050219_1,7298,FFVLAYAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7299 40.719 140.0 540450.0 25 0 63968.0 + 13768 HSDPSILGY 9 100 494.7404145209297 987.4662761086596 2 494.7407714724541 MULTI CID FTMS 0 0 0 7295 309135.96875 0.2109219717886307 3 -0.2243614196777343 4 Unmodified _HSDPSILGY_ ENSG00000146830|ENST00000678049|GIGYF1 57.47134341890925 0.0274820932774257 1 [HS]D[PS]{I|L}{I|L}GY 9 0 + 46.282 0.0 0.0 4.6869 4.6869 87.449 0.0 0.0 0.0 2.3764301679958777 17.095690636129888 2.3764301679958777 26.170912423450403 0 0.8494850021680094 0.0 1.6237125054200234 0.0 + + [HS]D[PS]{I|L}{I|L}GY;[KA][{I|L}T]D{[YD]|[{M(Oxidation (M))|F}M]}Y;{[QV]|[N{I|L}]|[RA]|[KV]}{[MG]|[TS]}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}Y;{[CP]|[EA]}[{I|L}A][HD]{I|L}GY;{[VA]|[{I|L}G]}[DV][HD]{I|L}GY;[TA][K{I|L}]D{[YD]|[{M(Oxidation (M))|F}M]}Y;[KA]{[ES]|[DT]|[{I|L}C]}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}Y;[KT][{I|L}A]D{[YD]|[{M(Oxidation (M))|F}M]}Y;{[QV]|[N{I|L}]|[RA]|[KV]}{[MG]|[TS]}T{[QS]|[NT]}[HT] 4.6869;2.0366;2.0366;1.3564;1.22;1.0109;0.9968;0.70432;0.23715 +;-;-;-;-;-;-;-;- + 445 1 2.229 64426.8 1.0 3810 3487 7295 DOHH2_400M_050219_1,7299 DOHH2_400M_050219_1,7299,HSDPSILGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7300 40.723 192.0 259180.0 25 0 25014.0 + 44143 YLDPAQQNLY 10 90 612.7994369070216 1223.584320880843 2 612.7997924685478 MULTI CID FTMS 0 0 0 7295 232724.34375 1.0 0 0.0 5 Unmodified _YLDPAQQNLY_ ENST00000421406.1_1_1:247353282-247372753:-|nuORF 32.78568957990786 0.2337485590374503 1 [Y{I|L}]D[PA]QQN{I|L}Y 10 0 + 55.577 0.0 0.0 4.5422 4.5422 73.122 0.0 0.0 0.0 22.212630078108333 19.59105848590866 19.59105848590866 1.059837384595923 0 0.6435078169319297 2.0 0.0 0.4247425010840047 + + [Y{I|L}]D[PA]QQN{I|L}Y;[Y{I|L}]D{M(Oxidation (M))|F}{I|L}DY{I|L}Y;[Y{I|L}]D{M(Oxidation (M))|F}D{I|L}Y{I|L}Y;[Y{I|L}]DM[RH]N{I|L}Y;[Y{I|L}]{M(Oxidation (M))|F}D{I|L}DY{I|L}Y;[Y{I|L}]D[PA]Q[AG]N{I|L}Y;[Y{I|L}]D[PA]QQGG{I|L}Y;[Y{I|L}]D[PA][AG]QN{I|L}Y;[Y{I|L}]{M(Oxidation (M))|F}DD{I|L}Y{I|L}Y;[Y{I|L}]{M(Oxidation (M))|F}[YT]QN{I|L}Y 4.5422;4.4555;4.3116;3.8644;3.8196;3.7932;3.7932;3.7932;3.6757;3.6184 +;-;-;-;-;-;-;-;-;- + 945 1 2.229 43674.4 1.0 3811 3487 7295 DOHH2_400M_050219_1,7300 DOHH2_400M_050219_1,7300,YLDPAQQNLY False True YLDPAQQNLY 40.723094 612.799792468548 1644400.5 7295.0 ENST00000421406.1_1_1:247353282-247372753:-|nuORF 6.495690822601318 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7301 40.737 800.0 276670.0 25 0 22957.0 -1 GYYWFHRMAHE 11 133 756.8291688317095 1511.6437847302188 2 756.8288452029228 MULTI CID FTMS 0 0 0 7295 169534.484375 0.3499703708157244 -2 0.1608390808105468 6 Oxidation (M) _GYYWFHRM(Oxidation (M))AHE_ ENSG00000187546|ENST00000342526|AGMO 5.296884461304476 0.8501568894076437 1 [HA]{M(Oxidation (M))|F}ANQQA[DN]S{M(Oxidation (M))|F}Y 13 -1 + 82.811 0.0 0.0 5.4782 5.4782 84.624 0.0 0.0 0.0 45.79368229100797 2.8255312134218684 2.8255312134218684 9.072459467631006 0 0.3807196863200844 0.0 0.5796896906561032 1.274227503252014 [HA]{M(Oxidation (M))|F}ANQQA[DN]S{M(Oxidation (M))|F}Y;[HA]{M(Oxidation (M))|F}AN[AG]QA[DN]S{M(Oxidation (M))|F}Y;[HA]{M(Oxidation (M))|F}ANQ[AG]A[DN]S{M(Oxidation (M))|F}Y;[HA]{M(Oxidation (M))|F}AGGQQA[DN]S{M(Oxidation (M))|F}Y;[HA]{M(Oxidation (M))|F}ANQQAEDSA[HS];[HA]{M(Oxidation (M))|F}ANQ[AG]AEDSA[HS];[HA]{M(Oxidation (M))|F}AGGQQAEDSA[HS];[HA]{M(Oxidation (M))|F}AN[AG]QAEDSA[HS];[HA]{M(Oxidation (M))|F}ANQ{[CP]|[EA]}[WE]{M(Oxidation (M))|F}Y;[HA]{M(Oxidation (M))|F}ANT[EP]MNA{M(Oxidation (M))|F}Y 5.4782;4.878;4.878;4.878;4.8337;4.235;4.235;4.235;4.114;4.0253 -;-;-;-;-;-;-;-;-;- 7359 + 1 2.229 156745.8 0.7300000190734863 3812 3487 7295 DOHH2_400M_050219_1,7301 DOHH2_400M_050219_1,7301,GYYWFHRMAHE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7302 40.741 213.0 427220.0 25 0 38296.0 + 11655 GLDDKLLHY 9 118 358.5260326737519 1072.5562686214555 3 358.5256835818291 MULTI CID FTMS 0 0 0 7295 170350.890625 0.8281506709205282 -1 0.0796699523925781 7 Unmodified _GLDDKLLHY_ ENSG00000156384|ENST00000369727|SFR1;nc|ENSG00000156384|Q86XK3-2|SFR1;nc|ENSG00000156384|Q86XK3-3|SFR1 19.361941925380144 0.3125782356748823 1 {[VA]|[{I|L}G]}DDK{I|L}{I|L}HY 9 0 + 72.145 0.0 0.0 6.7265 6.7265 94.235 0.0 0.0 0.0 31.69537382318357 14.09256854528806 14.09256854528806 24.771212547196622 0 0.2302046884880938 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}DDK{I|L}{I|L}HY;{[VA]|[{I|L}G]}DDK{I|L}{[WN]|[YH]}{I|L};{[VA]|[{I|L}G]}DDKW{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[VA]|[{I|L}G]}DDK{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 6.7265;4.4169;3.9721;3.1135 +;-;-;- + 115 + 1 2.229 74476.8 1.0 3813 3487 7295 DOHH2_400M_050219_1,7302 DOHH2_400M_050219_1,7302,GLDDKLLHY False True GLDDKLLHY 40.740994 358.525683581829 900057.9375 7295.0 ENSG00000156384|ENST00000369727|SFR1;;nc|ENSG00000156384|Q86XK3-3|SFR1;;nc|ENSG00000156384|Q86XK3-2|SFR1 5.88346020380656 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7303 40.75 488.0 523660.0 25 0 96210.0 + 19318 GEHGDSSVPVW 11 170 584.8617368262525 1167.7089207193048 2 584.8620483279228 MULTI CID FTMS 0 0 0 7295 120398.765625 0.4543083382966824 -2 0.1608390808105468 8 Unmodified _LELRQRLLQ_ ENST00000394996.2_1_10:120692379-120692769:-|nuORF;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-3|LDHA;ENSG00000166800|ENST00000280706|LDHAL6A;ENSG00000171989|ENST00000307144|LDHAL6B;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-5|LDHA;ENSG00000134333|ENST00000422447|LDHA;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 16.149105407346934 0.3995459350917656 1 PVW 3 9 18.416 0.0 0.0 1.5771 0.0 0.0 767.4972598271677 0.0 767.4972598271677 0.0 4.921525057367408 0.0 0.0 0 0.0 0.0 0.0 0.0 PVW 1.5771 - 697 + 1 2.229 193194.8 1.0 3814 3487 7295 DOHH2_400M_050219_1,7303 DOHH2_400M_050219_1,7303,LELRQRLLQ False True GEHGDSSVPVW 40.74963 584.862048327923 1158945.0 7295.0 ENST00000394996.2_1_10:120692379-120692769:-|nuORF;;nc|ENSG00000134333|P00338-4|LDHA;;nc|ENSG00000134333|P00338-3|LDHA;;ENSG00000166800|ENST00000280706|LDHAL6A;;ENSG00000171989|ENST00000307144|LDHAL6B;;nc|ENSG00000134333|P00338-2|LDHA;;nc|ENSG00000134333|P00338-5|LDHA;;ENSG00000134333|ENST00000422447|LDHA;;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 6.841503779093425 2.0 False 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7304 40.752 137.0 634050.0 25 0 92833.0 + 21019 LNVVRDRG 8 104 464.77068863589216 927.5268243385844 2 464.7707092165947 MULTI CID FTMS 0 0 0 7295 266020.28125 0.6768277169078583 -3 0.2698478698730469 9 Unmodified _LNVVRDRG_ REV__ENSG00000065183|ENST00000349139|WDR3 4.75600775471527 0.7954636275367004 1 C 1 -1 3.0989 0.0 0.0 0.33411 0.0 0.0 361.2314885004968 460.274344214328 821.5058327148248 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.33411 - 9 + 1 2.229 73051.4 1.0 3815 3487 7295 DOHH2_400M_050219_1,7304 DOHH2_400M_050219_1,7304,LNVVRDRG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7306 40.759 143.0 411220.0 25 0 50833.0 + 1349 AKTLGIVM 8 85 416.7517300076128 831.4889070820255 2 416.7516967654228 MULTI CID FTMS 0 0 0 7305 342806.03125 0.3408242235958461 2 -0.1783180236816406 1 Unmodified _AKTLGIVM_ nc|ENSG00000290584|Q9P1P4|TAAR3P 18.13498045792455 0.6430038125133779 1 G[DV]K{I|L}VM 7 5 27.936 0.0 0.0 3.3598 0.0 0.0 71.07428176093906 0.0 71.07428176093906 0.0 10.94675712086826 0.0 0.0 0 0.8935078169319297 0.0 1.079689690656103 0.0 G[DV]K{I|L}VM 3.3598 - 81 1 2.229 57597.7 1.0 3816 3488 7305 DOHH2_400M_050219_1,7306 DOHH2_400M_050219_1,7306,AKTLGIVM False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7307 40.764 309.0 346630.0 25 0 48032.0 + 33100 SESLFVSNHAY 11 120 627.2948011921844 1252.5750494511688 2 627.2949096560478 MULTI CID FTMS 0 0 0 7305 227907.015625 1.0 0 0.0 2 Unmodified _SESLFVSNHAY_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 49.52724829834842 0.1202481389936634 1 {[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSN[HA]Y 11 0 + 49.73 0.0 0.0 3.9702 3.9702 53.117 0.0 0.0 0.0 7.367585652254192 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.5189301784845296 0.2396518287104437 + + {[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSN[HA]Y;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSN{[QG]|[NA]}W;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSGG{[QG]|[NA]}W;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VS[DP]SW;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSGG[HA]Y;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VS{[WS]|[C(Carbamidomethyl (C)){I|L}]}[DP];{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{[NV]|[RG]}[DP];{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}[SG]{M(Oxidation (M))|F}{[HG]|PP}W;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}[YQ]{[HG]|PP}W;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}DD[RV]W 3.9702;3.9702;3.2415;3.1577;3.0501;2.7335;2.6845;2.3793;2.3448;2.1944 +;-;-;-;-;-;-;-;-;- + 1636 + 1 2.229 82487.4 1.0 3817 3488 7305 DOHH2_400M_050219_1,7307 DOHH2_400M_050219_1,7307,SESLFVSNHAY True True SESLFVSNHAY 40.764305 627.294909656048 1040766.0 7305.0 nc|ENSG00000149925|P04075|ALDOA;;ENSG00000149925|ENST00000642816|ALDOA 8.097967306772867 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7308 40.778 800.0 215250.0 25 0 14519.0 -1 ADMHSNLSNYH 11 174 652.7683421103051 1303.52213128741 2 652.7684814333916 MULTI CID FTMS 0 0 0 7305 202203.375 1.0 0 0.0 3 Oxidation (M) _ADM(Oxidation (M))HSNLSNYH_ ENSG00000166908|ENST00000354947|PIP4K2C;nc|ENSG00000166908|Q8TBX8-3|PIP4K2C 11.494710602746466 0.7960433852372589 1 [QA]GGGGENNSHGGY 14 -1 + 71.371 0.0 0.0 5.4753 5.4753 77.17 0.0 0.0 0.0 17.31894134698493 9.905919450477128 9.905919450477128 1.5708062412120398 0 0.9929928190999392 0.0 1.6861818737241734 0.0 [QA]GGGGENNSHGGY;[QA]GGGGEEWHGGY;[QA]GNGENNSHGGY;[QA]GNGEEWHGGY;[QA]GGNENNSHGGY;[QA]GGGGE[YT]MGGGY;[QA]GGNEEWHGGY;[QA]GGGGENNSGHGY;[QA]GGGGSGGGEHGGGY;[QA]GNGE[YT]MGGGY 5.4753;5.3548;5.3298;5.2112;5.1947;5.1167;5.0762;5.0134;4.9933;4.9712 -;-;-;-;-;-;-;-;-;- 141209 + 1 2.229 126453.9 0.8299999833106995 3818 3488 7305 DOHH2_400M_050219_1,7308 DOHH2_400M_050219_1,7308,ADMHSNLSNYH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7309 40.792 800.0 213960.0 25 0 25113.0 -1 0 129 1138.4847717819775 2274.954990630755 2 1138.987475574017 MULTI CID FTMS 0 0 0 7305 182476.4375 0.6599857836077018 -1 0.0460433959960937 4 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SGQQDYS 9 -1 37.119 0.0 0.0 1.6316 0.0 0.0 0.0 1272.5514621485866 1272.5514621485866 2.8617532050066146 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.392159058960253 0.6549471895720984 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SGQQDYS 1.6316 - 87799 1 2.229 108353.1 0.6600000262260437 3819 3488 7305 DOHH2_400M_050219_1,7309 DOHH2_400M_050219_1,7309, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7310 40.8 469.0 413080.0 25 0 36507.0 + 32918 SEKLDYITY 9 151 566.2816630855351 1130.54877323787 2 566.2821533083916 MULTI CID FTMS 0 0 0 7305 161977.515625 0.1228510874162261 -2 0.1257133483886718 5 Unmodified _SEKLDYITY_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000446317.1_1_20:3471092-3471287:-|nuORF;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 96.36657018975838 0.0123932121270252 1 {[ES]|[DT]|[{I|L}C]}K{I|L}DY{I|L}TY 9 0 + 74.086 0.0 0.0 6.5531 6.5531 83.38 0.0 0.0 0.0 3.4418767740052374 16.478174818886366 3.4418767740052374 3.4418767740052374 0 1.3807196863200843 0.0 2.013632853717045 0.0 + + {[ES]|[DT]|[{I|L}C]}K{I|L}DY{I|L}TY;[Y{I|L}]DKTD{I|L}TY;[Y{I|L}]DK{I|L}TDTY;[YT]{I|L}DKD{I|L}TY;{[ES]|[DT]|[{I|L}C]}K{I|L}YD{I|L}TY;[{I|L}T]AATDY{I|L}TY;[Y{I|L}]DKES{I|L}TY;[Y{I|L}]D{I|L}KTDTY;[Y{I|L}]DTKD{I|L}TY;{[MG]|[TS]}[VG]{I|L}DY{I|L}TY 6.5531;6.2487;6.1545;6.0821;6.0315;5.9879;5.9372;5.8882;5.8266;5.7426 +;-;-;-;-;-;-;-;-;- + 6883 1 2.229 153180.0 1.0 3820 3488 7305 DOHH2_400M_050219_1,7310 DOHH2_400M_050219_1,7310,SEKLDYITY True True SEKLDYITY 40.800313 566.282153308392 13882508.0 7305.0 ENST00000446317.1_1_20:3471092-3471287:-|nuORF;;ENST00000470585.5_1_1:38445118-38455637:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 7.532529989878337 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7311 40.814 800.0 151160.0 25 0 12917.0 + 9504 FLDPNNYSANY 11 147 659.2907207743247 1316.5668886154492 2 659.2912475466728 MULTI CID FTMS 0 0 0 7305 96950.03125 0.9402865639370184 -1 0.0460433959960937 6 Unmodified _FLDPNNYSANY_ ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK;nc|ENSG00000168297|Q7Z7A4-7|PXK 47.594388314883695 0.1309523012099263 1 [NP]NYS[C(Carbamidomethyl (C))K]SANY 11 6 + 47.967 0.0 0.0 3.6433 3.6433 78.5 0.0 0.0 0.0 10.07062321345802 32.48251986935944 10.07062321345802 9.128498242810998 0 0.7429928190999391 0.619788758288394 0.25 1.610924374808178 [NP]NYS[C(Carbamidomethyl (C))K]SANY;[NP]GGYS[C(Carbamidomethyl (C))K]SANY;[YN][NP]S[C(Carbamidomethyl (C))K]SANY;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[CP]|[EA]}[C(Carbamidomethyl (C))K]SANY;{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))Q]S[C(Carbamidomethyl (C))K]SANY;[MT]QQS[C(Carbamidomethyl (C))K]SANY;[{I|L}T][C(Carbamidomethyl (C))N]S[C(Carbamidomethyl (C))K]SANY;{[TV]|[{I|L}S]}C{[QG]|[NA]}S[C(Carbamidomethyl (C))K]SANY;[MT]A{[QG]|[NA]}S[C(Carbamidomethyl (C))K]SANY;{[SA]|[TG]}E[C(Carbamidomethyl (C))K][C(Carbamidomethyl (C))K]SANY 3.6433;2.95;2.5427;2.3321;2.0817;2.0693;2.0573;1.9929;1.9805;1.9155 -;-;-;-;-;-;-;-;-;- 1065 1 2.229 90570.1 0.6000000238418579 3821 3488 7305 DOHH2_400M_050219_1,7311 DOHH2_400M_050219_1,7311,FLDPNNYSANY False True FLDPNNYSANY 40.81415 659.291247546673 793527.0 7305.0 nc|ENSG00000168297|Q7Z7A4-4|PXK;;nc|ENSG00000168297|Q7Z7A4-2|PXK;;nc|ENSG00000168297|Q7Z7A4-6|PXK;;nc|ENSG00000168297|Q7Z7A4-7|PXK;;ENSG00000168297|ENST00000356151|PXK 7.070420900980632 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7312 40.828 800.0 197140.0 25 0 17220.0 + 6606 EAQLPTLL 8 188 442.7572265744243 883.4999002156486 2 442.7575256228447 MULTI CID FTMS 0 0 0 7305 89653.65625 0.491382824500176 -4 0.3158912658691406 7 Unmodified _EAQLPTLL_ REV__ENSG00000204480|ENST00000376101|PRAMEF19;REV__ENSG00000279804|ENST00000624297|PRAMEF18 12.531546534597751 0.7257836412119636 1 {I|L} 1 -1 12.218 0.0 0.0 1.383 0.0 0.0 752.4047902076393 0.0 752.4047902076393 0.0 9.45427765287466 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.383 + + 136 + 1 2.229 125220.4 0.4399999976158142 3822 3488 7305 DOHH2_400M_050219_1,7312 DOHH2_400M_050219_1,7312,EAQLPTLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7313 40.834 238.0 428580.0 25 0 24636.0 + 12291 GSDFYSMHY 9 122 553.7161703366344 1105.417787740069 2 553.7158080935478 MULTI CID FTMS 0 0 0 7305 89164.390625 0.2740377499837926 -1 0.0460433959960937 8 Unmodified _GSDFYSMHY_ ENSG00000196704|ENST00000359904|AMZ2;ENST00000584350.1_1_17:66246608-66253107:+|nuORF;nc|ENSG00000196704|Q86W34-5|AMZ2 74.42276476219924 0.019389277360085 1 [SG]D{M(Oxidation (M))|F}YSMNW 9 2 + 76.96 0.0 0.0 6.962 6.962 81.123 0.0 0.0 0.0 20.15794267183232 1.047353505200121 1.047353505200121 1.047353505200121 0 0.9749073637206092 1.3010299956639813 0.6989700043360187 0.0 [SG]D{M(Oxidation (M))|F}YSMNW;[SG]D{M(Oxidation (M))|F}YSMHY;[SG]D{M(Oxidation (M))|F}YSMYH;[SG]D{M(Oxidation (M))|F}YSMGGW;[SG]D{M(Oxidation (M))|F}Y[HM]SY;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}Y[QA]D{[CT]|[{M(Oxidation (M))|F}G]} 6.962;6.8673;6.8402;6.129;4.8111;2.0105 -;+;-;-;-;- + 759 + 1 2.229 86790.3 1.0 3823 3488 7305 DOHH2_400M_050219_1,7313 DOHH2_400M_050219_1,7313,GSDFYSMHY True True GSDFYSMHY 40.833908 553.715808093548 1575020.875 7305.0 ENST00000584350.1_1_17:66246608-66253107:+|nuORF;;ENSG00000196704|ENST00000359904|AMZ2;;nc|ENSG00000196704|Q86W34-5|AMZ2 9.520237763722738 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7315 40.839 26.0 2170600.0 25 0 114690.0 -1 0 54 910.4226577449356 1818.8307625566708 2 910.4242431521416 MULTI CID FTMS 0 0 0 7314 2085372.375 0.5332236840212768 2 -0.1883201599121093 1 1 [MN]PN{I|L}NADQ 9 -1 65.797 0.0 0.0 3.6176 0.0 0.0 0.0 818.3808687799436 818.3808687799436 37.38081412157533 0.0 0.0 0.0 0 1.0629529932484498 1.5228787452803376 0.0 0.805462187404089 [MN]PN{I|L}NADQ 3.6176 - 246 + 1 2.231 44804.3 1.0 3824 3489 7314 DOHH2_400M_050219_1,7315 DOHH2_400M_050219_1,7315, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7316 40.842 153.0 438960.0 25 0 29642.0 18996 LDHPNLAEY 9 92 536.258797948199 1070.503042963198 2 536.2588378787041 MULTI CID FTMS 0 0 0 7314 347413.0 0.0306714798664807 5 -0.461334228515625 2 Unmodified _LDHPNLAEY_ ENSG00000167740|ENST00000301391|CYB5D2;nc|ENSG00000167740|Q8WUJ1-3|CYB5D2 25.399314129420983 0.2080152500878129 1 TVV{M(Oxidation (M))|F}PHY 7 8 51.204 0.0 0.0 4.7831 0.0 0.0 209.06860800401665 0.0 209.06860800401665 0.0 41.44983511429008 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 TVV{M(Oxidation (M))|F}PHY 4.7831 - 146 + 1 2.231 59815.7 1.0 3825 3489 7314 DOHH2_400M_050219_1,7316 DOHH2_400M_050219_1,7316,LDHPNLAEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7317 40.843 70.0 928330.0 25 0 40136.0 -1 0 75 917.4314936076664 1832.8484342821328 2 917.4313842654228 MULTI CID FTMS 0 0 0 7314 897234.125 0.5083343017917579 -1 0.081512451171875 3 1 [MN]PN{I|L}NEAQ 9 -1 59.988 0.0 0.0 3.2729 0.0 0.0 0.0 818.3760470025999 818.3760470025999 30.792104754538045 0.0 0.0 0.0 0 0.9876954943324544 1.6989700043360187 0.0 0.4247425010840047 [MN]PN{I|L}NEAQ 3.2729 - 652 + 1 2.231 47579.1 1.0 3826 3489 7314 DOHH2_400M_050219_1,7317 DOHH2_400M_050219_1,7317, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7318 40.845 84.0 968900.0 25 0 120680.0 + 7050 EELGFRPEY 9 78 570.2719176050527 1138.5292822769054 2 570.2722656130791 MULTI CID FTMS 0 0 0 7314 661486.6875 0.2634104868154723 -2 0.1275558471679687 4 Unmodified _EELGFRPEY_ ENSG00000143799|ENST00000366794|PARP1 39.94969957227396 0.0757326808254658 1 EE{I|L}G{M(Oxidation (M))|F}R[EP]Y 9 0 + 67.668 0.0 0.0 5.9434 5.9434 92.168 0.0 0.0 0.0 53.06356549837645 15.003859178250778 15.003859178250778 27.44727494896693 0 0.4247425010840047 2.0 0.6307196863200843 0.0 + + EE{I|L}G{M(Oxidation (M))|F}R[EP]Y;[EP]V[HT]{M(Oxidation (M))|F}G{I|L}[HC];[DP]{I|L}[HT]{M(Oxidation (M))|F}G{I|L}[HC];[YE]RRY{I|L}[HC];[QA][TA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[WR];[QA][EP][HC]{I|L}[WR];[QA][HC][EP]{I|L}[WR] 5.9434;3.5327;2.7607;1.8421;0.49471;0.23031;0.075641 +;-;-;-;-;-;- + 176 + 1 2.231 67201.1 1.0 3827 3489 7314 DOHH2_400M_050219_1,7318 DOHH2_400M_050219_1,7318,EELGFRPEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7319 40.849 176.0 506280.0 25 0 26047.0 -1 RCHRRRRRCCC 11 102 866.9070431313726 1731.799533329545 2 866.9086181521416 MULTI CID FTMS 0 0 0 7314 386688.40625 0.0333052040403257 -10 0.9680061340332032 5 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 1 [MN]PN{I|L}NAM[Q{I|L}]TNM{I|L}Q 15 -1 + 79.883 0.0 0.0 4.6127 4.6127 78.488 0.0 0.0 0.0 56.21069038547027 1.614182679949934 1.614182679949934 5.0743832831149405 0 1.3667053245199623 1.5228787452803376 0.0 1.1989700043360187 [MN]PN{I|L}NAM[Q{I|L}]TNM{I|L}Q;[MN]PN{I|L}NAD[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]PN{I|L}NAM[Q{I|L}][WC(Carbamidomethyl (C))]{I|L}Q;[MN]PN{I|L}NW[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[NP]{I|L}NM[RH]DAN{I|L}D[WH];[NP]{I|L}[TP][DP]QDAN{I|L}D[WH];[NP]{I|L}[PG]QQQDAN{I|L}D[WH];[NP]{I|L}NM[RH]WN{I|L}D[WH];[NP]{I|L}[TP][DP]QWN{I|L}D[WH];[NP]{I|L}GGM[RH]DAN{I|L}D[WH] 4.6127;4.3197;4.0426;3.9347;3.8287;3.7532;3.5514;3.4437;3.3669;3.3061 -;-;-;-;-;-;-;-;-;- 1475 + 1 2.231 63876.8 1.0 3828 3489 7314 DOHH2_400M_050219_1,7319 DOHH2_400M_050219_1,7319,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7320 40.853 198.0 248470.0 25 0 42942.0 10814 FYVVIPPAL 9 80 509.8041028746115 0 509.8041259646416 PEAK CID FTMS 0 0 0 7314 220083.1875 0.7971607806596774 2 -0.1883201599121093 6 Unmodified _FYVVIPPAL_ nc|ENSG00000273085|Q8NGJ3|OR52E1 2.302733041254933 0.3444685223463735 1 {I|L} 1 8 3.9794 0.0 0.0 0.39106 0.0 0.0 642.4483108744199 259.04010950260005 901.48842037702 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.39106 + + 9 + 1 2.231 42436.0 1.0 3829 3489 7314 DOHH2_400M_050219_1,7320 DOHH2_400M_050219_1,7320,FYVVIPPAL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7321 40.857 212.0 393560.0 25 0 17607.0 + 6315 DVHRRFLQL 9 111 395.22841924235655 1182.6634283272697 3 395.2279846072197 MULTI CID FTMS 0 0 0 7314 223462.0625 1.0 0 0.0 7 Unmodified _DVHRRFLQL_ ENSG00000169189|ENST00000361439|NSMCE1;ENST00000565070.5_1_16:27237776-27268891:-|nuORF;ENST00000565626.1_1_16:27268693-27268891:-|nuORF 22.65808497894818 0.2428932432760099 1 QNQ{I|L} 4 7 28.448 0.0 0.0 2.4055 0.0 0.0 681.4215484336847 0.0 681.4215484336847 0.0 18.984484532805155 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3494850021680094 QNQ{I|L} 2.4055 - 61 1 2.231 69382.3 1.0 3830 3489 7314 DOHH2_400M_050219_1,7321 DOHH2_400M_050219_1,7321,DVHRRFLQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7322 40.861 259.0 309340.0 25 0 21838.0 + 38461 TSDFSRFTNY 10 108 619.2778640250698 1236.5411751169397 2 619.2780639529228 MULTI CID FTMS 0 0 0 7314 212470.90625 0.7385454116091557 -1 0.081512451171875 8 Unmodified _TSDFSRFTNY_ ENSG00000175305|ENST00000308108|CCNE2;nc|ENSG00000175305|O96020-2|CCNE2 73.1962812333195 0.0188336640735478 1 TSD{M(Oxidation (M))|F}S{[{M(Oxidation (M))|F}H]|[RQ]}[KG]DP 11 5 + 64.773 0.0 0.0 5.2382 5.2382 79.122 0.0 0.0 0.0 38.96142356279626 2.8348771541669464 2.8348771541669464 3.5654732351381284 0 0.8494850021680094 1.6989700043360187 0.0 0.6549471895720985 TSD{M(Oxidation (M))|F}S{[{M(Oxidation (M))|F}H]|[RQ]}[KG]DP;TSD[WE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}DP;TPDHS{[{M(Oxidation (M))|F}H]|[RQ]}[KG]DP;{[MG]|[TS]}{[WN]|[YH]}[HK]STNY;{[ET]|[MV]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YC(Carbamidomethyl (C))]NY;[Q{I|L}][NS][HN]{M(Oxidation (M))|F}TNY;{[QS]|[NT]}{[QV]|[N{I|L}]|[RA]|[KV]}[HN]{M(Oxidation (M))|F}TNY;[Q{I|L}][C(Carbamidomethyl (C))S][HK]STNY;{[QS]|[NT]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[HK]STNY;AAV[NS][HN]{M(Oxidation (M))|F}TNY 5.2382;4.9499;1.5955;1.3503;0.46734;0.29582;0.29582;0.15342;0.15342;0.055908 -;-;-;-;-;-;-;-;-;- 398 + 1 2.231 65425.5 1.0 3831 3489 7314 DOHH2_400M_050219_1,7322 DOHH2_400M_050219_1,7322,TSDFSRFTNY True True TSDFSRFTNY 40.861439 619.278063952923 1786064.25 7314.0 nc|ENSG00000175305|O96020-2|CCNE2;;ENSG00000175305|ENST00000308108|CCNE2 7.548860390981038 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7323 40.875 800.0 166980.0 25 0 19284.0 + 40429 VIIEKTYSL 9 159 533.313520826746 1064.6124887202918 2 533.3148681521416 MULTI CID FTMS 0 0 0 7314 128587.1015625 1.0 0 0.0 9 Unmodified _VIIEKTYSL_ ENSG00000166889|ENST00000300146|PATL1;nc|ENSG00000166889|Q86TB9-2|PATL1;nc|ENSG00000166889|Q86TB9-4|PATL1 30.63653989081413 0.1413794767160703 1 [{I|L}V]{[SA]|[TG]}TYS{I|L}V{I|L} 10 5 + 56.036 0.0 0.0 5.2635 5.2635 75.507 0.0 0.0 0.0 2.530834337684311 20.236213515243136 2.530834337684311 0.9948500216800936 0 0.6549471895720985 2.0 1.1861818737241734 0.0 [{I|L}V]{[SA]|[TG]}TYS{I|L}V{I|L};[{I|L}V]{[SA]|[TG]}YTS{I|L}V{I|L};[{I|L}V]{I|L}[HM][RP]S{I|L};[{I|L}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YS{I|L}V{I|L};[{I|L}V]{I|L}[HM]T{I|L}AAP;{[TV]|[{I|L}S]}G{I|L}TYS{I|L}V{I|L};{[QN]|[E{I|L}]|[KN]}KTYS{I|L}V{I|L};{[TV]|[{I|L}S]}G{I|L}YTS{I|L}V{I|L};[{I|L}V]{I|L}[HM][RP]TV;{[QN]|[E{I|L}]|[KN]}KYTS{I|L}V{I|L} 5.2635;5.1701;4.4964;4.1761;4.0701;4.0174;3.9257;3.924;3.849;3.8322 -;-;-;-;-;-;-;-;-;- 1211 1 2.231 106403.0 0.6100000143051147 3832 3489 7314 DOHH2_400M_050219_1,7323 DOHH2_400M_050219_1,7323,VIIEKTYSL False True VIIEKTYSL 40.87527 533.314868152142 550991.625 7314.0 ENSG00000166889|ENST00000300146|PATL1;;nc|ENSG00000166889|Q86TB9-2|PATL1;;nc|ENSG00000166889|Q86TB9-4|PATL1 0.5938107166439295 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7324 40.882 399.0 248160.0 25 0 15693.0 33607 SIPSKMAYE 9 147 513.2509150419476 1024.487277150695 2 513.2515746951103 MULTI CID FTMS 0 0 0 7314 112469.7734375 0.9791625148767276 -1 0.081512451171875 10 Unmodified _SIPSKMAYE_ ENSG00000175029|ENST00000309035|CTBP2 25.399314129420983 0.2080152500878129 1 S{I|L}QA{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L} 9 6 + 43.093 0.0 0.0 4.2063 4.2063 81.58 0.0 0.0 0.0 25.641499165845 2.1889422838746952 2.1889422838746952 9.208187539523747 0 0.8252574989159953 0.6989700043360187 0.6307196863200843 0.0 S{I|L}QA{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L};S{I|L}[AG]A{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L};{[CP]|[EA]}QA{I|L}{[WN]|[YH]}{[HG]|PP};{[CP]|[EA]}QA{I|L}YY[PA];[PG]Q{[ET]|[MV]}{I|L}A[Y{M(Oxidation (M))|F}];{[CP]|[EA]}[AG]A{I|L}{[WN]|[YH]}{[HG]|PP};{[CP]|[EA]}QAW{[QV]|[N{I|L}]|[RA]|[KV]}{[HG]|PP};{[CP]|[EA]}QAW[QP][VP] 4.2063;3.3075;1.3963;0.89148;0.6255;0.49745;0.4425;0.2552 -;-;-;-;-;-;-;- 448 + 1 2.231 76714.1 1.0 3833 3489 7314 DOHH2_400M_050219_1,7324 DOHH2_400M_050219_1,7324,SIPSKMAYE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7325 40.896 800.0 157300.0 25 0 11526.0 -1 0 116 599.6363067183453 1795.8870907552357 3 599.6406738162041 MULTI CID FTMS 0 0 0 -1 0 11 1 [H{I|L}][NP][VP]{M(Oxidation (M))|F}TYA{M(Oxidation (M))|F}{I|L}H{I|L}Q 15 -1 + 67.374 0.0 0.0 3.7516 3.7516 72.192 0.0 0.0 0.0 13.802112417116064 9.030899869919438 9.030899869919438 2.218487496163561 0 1.2302046884880935 1.6989700043360187 0.0 0.0 [H{I|L}][NP][VP]{M(Oxidation (M))|F}TYA{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP][VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP][VP]{M(Oxidation (M))|F}YTA{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP]{I|L}{[ET]|[MV]}TYA{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP]{I|L}[C(Carbamidomethyl (C))K]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}NH{I|L}Q;[H{I|L}][NP]{I|L}{[ET]|[MV]}YDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP]{I|L}{[ET]|[MV]}YTA{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H[VP]{M(Oxidation (M))|F}TYA{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H[VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H[VP]{M(Oxidation (M))|F}YTA{M(Oxidation (M))|F}{I|L}H{I|L}Q 3.7516;3.628;3.53;3.4756;3.395;3.3521;3.254;2.983;2.8595;2.7614 -;-;-;-;-;-;-;-;-;- 1270 1 2.231 99977.1 0.6000000238418579 3834 3489 7314 DOHH2_400M_050219_1,7325 DOHH2_400M_050219_1,7325, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7326 40.91 800.0 137520.0 25 0 8161.0 + + 23103 RSPDFASSF 9 138 506.8118114330661 0 506.8122436404228 PEAK CID FTMS 0 0 0 7314 101490.65625 0.2484908605400277 2 -0.1883201599121093 12 Unmodified _LSNTVLRPL_ ENSG00000185043|ENST00000328649|CIB1;nc|ENSG00000185043|Q99828-2|CIB1 11.640296217721598 0.2934555500198502 1 SSA{M(Oxidation (M))|F} 4 -1 26.542 0.0 0.0 2.6238 0.0 0.0 164.22541622375098 452.1902874369173 616.4157036606683 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 SSA{M(Oxidation (M))|F} 2.6238 - 187 + 1 2.231 89094.7 0.5099999904632568 3835 3489 7314 DOHH2_400M_050219_1,7326 DOHH2_400M_050219_1,7326,LSNTVLRPL False False RSPDFASSF 40.910062 506.812243640423 2523427.25 7314.0 ENSG00000185043|ENST00000328649|CIB1;;nc|ENSG00000185043|Q99828-2|CIB1 5.812648932139079 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7327 40.925 800.0 66759.0 25 0 2679.3 + 14259 IEEQPKNYQVW 11 100 717.3574159808409 1432.7002790284816 2 717.3587524294853 MULTI CID FTMS 0 0 0 7314 88482.7890625 1.0 0 0.0 13 Unmodified _IEEQPKNYQVW_ ENSG00000168522|ENST00000302279|FNTA;ENST00000526755.5_1_8:42911676-42932640:+|nuORF;nc|ENSG00000168522|P49354-2|FNTA 22.65808497894818 0.560183898709508 1 {[QN]|[E{I|L}]|[KN]}EQ[DC][RK]QVW 11 4 + 43.134 0.0 0.0 3.0107 3.0107 70.31 0.0 0.0 0.0 17.117581349478638 11.302663821573478 11.302663821573478 2.271212547196626 0 1.3182503180159344 1.3979400086720375 0.3252574989159953 0.0 {[QN]|[E{I|L}]|[KN]}EQ[DC][RK]QVW;{[QN]|[E{I|L}]|[KN]}EQ[KA][R{M(Oxidation (M))|F}]QVW;[R{M(Oxidation (M))|F}]QN[NG]R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VW;[R{M(Oxidation (M))|F}]QNHH[Y{M(Oxidation (M))|F}]VW;[AG]EE{I|L}[DC][RK]QVW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{I|L}[DC][RK]QVW;[AG]EE{I|L}[KA][R{M(Oxidation (M))|F}]QVW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{I|L}[KA][R{M(Oxidation (M))|F}]QVW;[AG]EERR[R{M(Oxidation (M))|F}]QVW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ERR[R{M(Oxidation (M))|F}]QVW 3.0107;2.8522;1.8159;1.6147;1.5727;1.5434;1.4142;1.3849;0.98924;0.96246 -;-;-;-;-;-;-;-;-;- 215 1 2.231 41825.0 0.5799999833106995 3836 3489 7314 DOHH2_400M_050219_1,7327 DOHH2_400M_050219_1,7327,IEEQPKNYQVW False True IEEQPKNYQVW 40.925355 717.358752429485 666144.0625 7314.0 ENST00000526755.5_1_8:42911676-42932640:+|nuORF;;ENSG00000168522|ENST00000302279|FNTA;;nc|ENSG00000168522|P49354-2|FNTA 6.893838405609131 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7328 40.931 292.0 236440.0 25 0 18897.0 + 627 AELAVGSRW 9 113 494.7636896283264 987.5128263234528 2 494.7640869021416 MULTI CID FTMS 0 0 0 7314 120019.359375 1.0 0 0.0 14 Unmodified _AELAVGSRW_ ENSG00000107745|ENST00000361114|MICU1;ENST00000604025.1_1_10:74322649-74385775:-|nuORF;nc|ENSG00000107745|Q9BPX6-2|MICU1;nc|ENSG00000107745|Q9BPX6-3|MICU1;nc|ENSG00000107745|Q9BPX6-6|MICU1 19.361941925380144 0.3125782356748823 1 {[CP]|[EA]}{I|L}AVWW 7 3 41.471 0.0 0.0 4.1995 0.0 0.0 0.0 129.05613123111564 129.05613123111564 23.511744483784085 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 {[CP]|[EA]}{I|L}AVWW 4.1995 - 257 + 1 2.231 56794.9 1.0 3837 3489 7314 DOHH2_400M_050219_1,7328 DOHH2_400M_050219_1,7328,AELAVGSRW False True AELAVGSRW 40.930712 494.764086902142 623379.3125 7314.0 nc|ENSG00000107745|Q9BPX6-2|MICU1;;nc|ENSG00000107745|Q9BPX6-6|MICU1;;ENSG00000107745|ENST00000361114|MICU1;;ENST00000604025.1_1_10:74322649-74385775:-|nuORF;;nc|ENSG00000107745|Q9BPX6-3|MICU1 4.460653622945149 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7330 40.936 11.0 4966500.0 25 0 1244700.0 + 37681 TLNEKLTAL 9 82 501.7946599745563 1001.5747670159126 2 501.7951232790947 MULTI CID FTMS 0 0 0 7329 5373101.5 0.97731891725732 1 -0.0915145874023437 1 Unmodified _TLNEKLTAL_ ENSG00000254999|ENST00000530758|BRK1;nc|ENSG00000254999|Q8WUW1-2|BRK1 60.07390631473393 0.0260411565414776 1 [{I|L}T]NEK{I|L}TA{I|L} 9 0 + 62.758 0.0 0.0 6.2659 6.2659 88.993 0.0 0.0 0.0 11.581531501239295 14.973024840566469 11.581531501239295 9.208187539523747 0 1.1677353201839438 2.0 0.4247425010840047 0.0 + + [{I|L}T]NEK{I|L}TA{I|L};[{I|L}T]GGEK{I|L}TA{I|L};[{I|L}T][KA][DG]A{I|L}T{I|L};[{I|L}T][KA][DG]{I|L}AT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[K{I|L}]TA{I|L}T{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[K{I|L}]T{I|L}AT{I|L};[R{M(Oxidation (M))|F}]{I|L}TRN[VP];[{I|L}T]NR[VP][R{M(Oxidation (M))|F}];[TA][K{I|L}][DG]A{I|L}T{I|L};[TA][K{I|L}][DG]{I|L}AT{I|L} 6.2659;5.3465;4.9065;4.7294;3.3042;3.1272;3.0319;2.8261;1.9755;1.7985 +;-;-;-;-;-;-;-;-;- + 195 + 1 2.231 47639.1 1.0 3838 3490 7329 DOHH2_400M_050219_1,7330 DOHH2_400M_050219_1,7330,TLNEKLTAL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7331 40.937 25.0 2316000.0 25 0 332170.0 + 33133 SEVDLTRSF 9 64 527.2643446702907 1052.514136407381 2 527.2645141482353 MULTI CID FTMS 0 0 0 7329 2204175.75 0.722848073073982 1 -0.0915145874023437 2 Unmodified _SEVDLTRSF_ ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2 33.4449034751529 0.1114409586740657 1 {[ES]|[DT]|[{I|L}C]}VD{I|L}TRS{M(Oxidation (M))|F} 9 0 + 52.33 0.0 0.0 4.9719 4.9719 89.45 0.0 0.0 0.0 37.72038431917139 6.840380319756534 6.840380319756534 52.32956253501804 0 1.424742501084005 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}VD{I|L}TRS{M(Oxidation (M))|F} 4.9719 + + 100 + 1 2.231 48870.2 1.0 3839 3490 7329 DOHH2_400M_050219_1,7331 DOHH2_400M_050219_1,7331,SEVDLTRSF True True SEVDLTRSF 40.93668 527.264514148235 15935021.0 7329.0 nc|ENSG00000100938|Q9P2T1-2|GMPR2;;ENSG00000100938|ENST00000399440|GMPR2;;nc|ENSG00000100938|Q9P2T1-3|GMPR2 3.747687498728434 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7332 40.938 29.0 1812800.0 25 0 427980.0 11428 GGVIKQGWL 9 73 479.27752848024926 956.5405040272984 2 479.2775756716728 MULTI CID FTMS 0 0 0 7329 2069209.25 1.0 0 0.0 3 Unmodified _GGVIKQGWL_ ENSG00000147251|ENST00000276202|DOCK11 2.302733041254933 0.8342969208511092 1 H 1 9 10.0 0.0 0.0 1.0454 0.0 0.0 801.4743704597189 0.0 801.4743704597189 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.0454 - 1 + 1 2.231 46751.4 1.0 3840 3490 7329 DOHH2_400M_050219_1,7332 DOHH2_400M_050219_1,7332,GGVIKQGWL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7333 40.94 83.0 740040.0 25 0 69398.0 + 364 AEDELFNRY 9 72 578.7669735787837 1155.5193942243673 2 578.7670165896416 MULTI CID FTMS 0 0 0 7329 668828.125 0.5997361245117485 -1 0.0968055725097656 4 Unmodified _AEDELFNRY_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107 71.92227651296345 0.0203558744033348 1 {[CP]|[EA]}DE{I|L}{M(Oxidation (M))|F}NRY 9 0 + 66.164 0.0 0.0 5.7259 5.7259 87.0 0.0 0.0 0.0 7.147642715192504 9.719712763997563 7.147642715192504 9.208187539523747 0 1.3494850021680094 0.0 0.4247425010840047 0.3807196863200844 + + {[CP]|[EA]}DE{I|L}{M(Oxidation (M))|F}NRY;{[CP]|[EA]}DE{I|L}{M(Oxidation (M))|F}GGRY;{[CP]|[EA]}DE{I|L}{M(Oxidation (M))|F}Y[RN];{[CP]|[EA]}DE{I|L}Y{M(Oxidation (M))|F}[RN];{[CP]|[EA]}DEY{I|L}{M(Oxidation (M))|F}[RN];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[Q{I|L}]{I|L}E[C(Carbamidomethyl (C))H] 5.7259;4.929;4.8847;4.2798;3.8669;3.3889 +;-;-;-;-;- + 150 + 1 2.231 55064.1 1.0 3841 3490 7329 DOHH2_400M_050219_1,7333 DOHH2_400M_050219_1,7333,AEDELFNRY True True AEDELFNRY 40.939745 578.767016589642 6228094.5 7329.0 ENSG00000111581|ENST00000229179|NUP107;;nc|ENSG00000111581|P57740-3|NUP107;;nc|ENSG00000111581|P57740-2|NUP107 5.534538984298706 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7334 40.942 92.0 622070.0 25 0 127060.0 30332 RAFILIQN 8 81 487.7910707870828 973.5675886409656 2 487.7908813357353 MULTI CID FTMS 0 0 0 7329 665204.625 0.8005749428825583 -2 0.1783180236816406 5 Unmodified _RAFILIQN_ ENST00000474427.6_1_6:134491831-134492053:-|nuORF 5.230669730166228 0.792582437072536 1 W 1 8 12.218 0.0 0.0 1.255 0.0 0.0 769.4778497267063 0.0 769.4778497267063 0.0 3.3226467981605623 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.255 - 9 + 1 2.231 47600.8 1.0 3842 3490 7329 DOHH2_400M_050219_1,7334 DOHH2_400M_050219_1,7334,RAFILIQN False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7335 40.944 100.0 722620.0 25 0 99813.0 + 31834 RTEEALQLY 9 75 561.7926056379071 1121.570658342614 2 561.7932006716728 MULTI CID FTMS 0 0 0 7329 477704.5 0.8515600776370544 -1 0.0968055725097656 6 Unmodified _RTEEALQLY_ ENSG00000174780|ENST00000642900|SRP72 20.41453444215458 0.284085796332423 1 A{I|L}Q{I|L}Y 5 4 48.756 0.0 0.0 4.3471 0.0 0.0 515.2357655255875 0.0 515.2357655255875 0.0 15.390821784153346 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 + A{I|L}Q{I|L}Y 4.3471 + + 132 1 2.231 59716.7 1.0 3843 3490 7329 DOHH2_400M_050219_1,7335 DOHH2_400M_050219_1,7335,RTEEALQLY False True RTEEALQLY 40.943918 561.793200671673 3210507.25 7329.0 ENSG00000174780|ENST00000642900|SRP72 4.622882684071858 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7336 40.946 112.0 600420.0 25 0 59402.0 + 349 AEASMISKL 9 103 475.2552460501048 948.4959391670096 2 475.2550231814384 MULTI CID FTMS 0 0 0 7329 374629.875 0.6866803389961766 -1 0.0968055725097656 7 Unmodified _AEASMISKL_ ENSG00000055130|ENST00000325222|CUL1 28.49450938151212 0.1686335738423394 1 {[CP]|[EA]}ASM{I|L}SK{I|L} 9 0 + 48.382 0.0 0.0 5.1009 5.1009 88.766 0.0 0.0 0.0 32.3523578400939 9.621892823592972 9.621892823592972 24.69273760456403 0 0.8494850021680094 0.0 0.3054621874040891 0.0 + + {[CP]|[EA]}ASM{I|L}SK{I|L};[C(Carbamidomethyl (C))N][KS]{I|L}SK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[QT]ESK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KS]S{I|L}A{[CP]|[EA]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KS]SA{I|L}{[CP]|[EA]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KT][R{M(Oxidation (M))|F}][PG] 5.1009;2.4976;1.906;0.49292;0.22325;0.21025 +;-;-;-;-;- + 197 + 1 2.231 58847.2 1.0 3844 3490 7329 DOHH2_400M_050219_1,7336 DOHH2_400M_050219_1,7336,AEASMISKL False True AEASMISKL 40.946264 475.255023181438 5626237.0 7329.0 ENSG00000055130|ENST00000325222|CUL1 5.56015412012736 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7337 40.949 106.0 549950.0 25 0 77204.0 13302 HKAPSART 8 91 434.242662895386 866.470772857572 2 434.2428771853447 MULTI CID FTMS 0 0 0 7329 380345.25 0.8171028190036782 -2 0.1783180236816406 8 Unmodified _HKAPSART_ ENSG00000131773|ENST00000355849|KHDRBS3 2.302733041254933 0.8103549651115762 1 S 1 7 5.8412 0.0 0.0 0.67414 0.0 0.0 433.27855591596887 343.1407564752563 776.4193123912252 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + S 0.67414 + + 1 + 1 2.231 52791.9 1.0 3845 3490 7329 DOHH2_400M_050219_1,7337 DOHH2_400M_050219_1,7337,HKAPSART False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7338 40.952 190.0 555780.0 25 0 53538.0 + 425 AEELFARKF 9 94 555.8006323691342 1109.5867118050685 2 555.8007690310478 MULTI CID FTMS 0 0 0 7329 328163.0 0.5725228279309066 -1 0.0968055725097656 9 Unmodified _AEELFARKF_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 82.5293158979368 0.0169039238599547 1 AEE{I|L}{M(Oxidation (M))|F}ARK{M(Oxidation (M))|F} 9 0 + 102.35 0.0 0.0 9.2241 9.2241 98.979 0.0 0.0 0.0 54.72479721008234 8.116742845273066 8.116742845273066 48.91563799163855 0 1.924742501084005 1.6989700043360187 0.9247425010840048 0.7302046884880937 + + AEE{I|L}{M(Oxidation (M))|F}ARK{M(Oxidation (M))|F};AEE{I|L}[RP]{[QN]|[E{I|L}]|[KN]}[PG];[VP]PRA{M(Oxidation (M))|F}{I|L}[HC]A;[RK]A{M(Oxidation (M))|F}{I|L}E{M(Oxidation (M))|F}EA;[RK]A{M(Oxidation (M))|F}{I|L}E{M(Oxidation (M))|F}AE;[RK][HV]{M(Oxidation (M))|F}{I|L}[HC]A;{[MS]|[{M(Oxidation (M))|F}A]}[RK]{I|L}E{M(Oxidation (M))|F}AE;{[MS]|[{M(Oxidation (M))|F}A]}[RK]{I|L}E{M(Oxidation (M))|F}EA;{[MS]|[{M(Oxidation (M))|F}A]}[R{I|L}]KE{M(Oxidation (M))|F}EA;{[MS]|[{M(Oxidation (M))|F}A]}[R{I|L}]KE{M(Oxidation (M))|F}AE 9.2241;4.8156;4.2473;3.1878;3.1878;2.8108;1.9009;1.9009;1.4709;1.4709 +;-;-;-;-;-;-;-;-;- + 431 + 1 2.231 85746.0 1.0 3846 3490 7329 DOHH2_400M_050219_1,7338 DOHH2_400M_050219_1,7338,AEELFARKF True True AEELFARKF 40.952178 555.800769031048 2980490.0 7329.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 6.511340618133545 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7339 40.96 456.0 398080.0 25 0 35870.0 -1 YAFACEQM 8 183 518.1990272946816 1034.3835016561632 2 518.1996948122978 MULTI CID FTMS 0 0 0 7329 255870.515625 1.0 0 0.0 10 Carbamidomethyl (C),Oxidation (M) _YAFAC(Carbamidomethyl (C))EQM(Oxidation (M))_ ENSG00000167615|ENST00000326764|LENG8;nc|ENSG00000167615|Q96PV6-1|LENG8 21.74664581756881 0.5868176546531598 1 YA{M(Oxidation (M))|F}GN 5 -1 49.285 0.0 0.0 4.7646 0.0 0.0 0.0 479.1291292779906 479.1291292779906 26.404243831634982 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YA{M(Oxidation (M))|F}GN 4.7646 - 301 + 1 2.231 137912.7 1.0 3847 3490 7329 DOHH2_400M_050219_1,7339 DOHH2_400M_050219_1,7339,YAFACEQM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7340 40.965 256.0 367710.0 25 0 63925.0 27160 PFSNAACH 8 102 423.6808543694148 845.3471558056297 2 423.6815063357353 MULTI CID FTMS 0 0 0 7329 229605.03125 0.6081357899587122 -1 0.0968055725097656 11 Unmodified _PFSNAACH_ nc|ENSG00000064419|Q9Y5L0-1|TNPO3 2.889219685676258 0.8067950007271085 1 VV{I|L} 3 8 30.062 0.0 0.0 3.5561 0.0 0.0 0.0 531.1030511515859 531.1030511515859 16.082268588648247 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 VV{I|L} 3.5561 - 60 1 2.231 79812.6 1.0 3848 3490 7329 DOHH2_400M_050219_1,7340 DOHH2_400M_050219_1,7340,PFSNAACH False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7341 40.97 270.0 296360.0 25 0 31308.0 + 29489 QLKIKEVTL 9 115 357.8975680877839 1070.6708748635515 3 357.8969604372978 MULTI CID FTMS 0 0 0 7329 220190.328125 1.0 0 0.0 12 Unmodified _QLKIKEVTL_ ENSG00000094804|ENST00000209728|CDC6 12.240655878213236 0.5053430591993562 1 T{I|L} 2 7 15.049 0.0 0.0 1.4056 0.0 0.0 838.5279285518315 0.0 838.5279285518315 0.0 4.670802793795268 0.0 0.0 0 0.0 0.0 0.1861818737241735 0.0 + T{I|L} 1.4056 + + 97 + 1 2.231 70247.8 1.0 3849 3490 7329 DOHH2_400M_050219_1,7341 DOHH2_400M_050219_1,7341,QLKIKEVTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7342 40.977 387.0 360310.0 25 0 30339.0 + + 33784 FAKPENIDL 9 161 523.780587827792 1045.546622722384 2 523.7803222537041 MULTI CID FTMS 0 0 0 7329 200719.46875 1.0 0 0.0 13 Unmodified _SLCALAQIDL_ nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1;ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1 38.17557092003332 0.1768326257063233 1 {NN|[MP]|[D{I|L}]|[EV]}[PA]GDKA{M(Oxidation (M))|F}{I|L} 10 -1 + 54.505 0.0 0.0 5.2131 5.2131 74.823 0.0 0.0 0.0 6.976020196809252 16.532125137753432 6.976020196809252 0.5115252244738144 0 0.0 1.6989700043360187 0.0 0.8921590589602533 {NN|[MP]|[D{I|L}]|[EV]}[PA]GDKA{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QP]DKA{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PA]GKDA{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QP]KDA{M(Oxidation (M))|F}{I|L};[EP]N{I|L}DKA{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PA]GKW{M(Oxidation (M))|F}{I|L};[EP]N{I|L}KDA{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QP]KW{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[H{I|L}][HA]{I|L}D{I|L};[DP]Q{I|L}DKA{M(Oxidation (M))|F}{I|L} 5.2131;5.1641;4.902;4.853;4.5458;4.273;4.2348;4.2292;4.2089;3.8381 -;-;-;-;-;-;-;-;-;- 1386 1 2.231 110365.4 1.0 3850 3490 7329 DOHH2_400M_050219_1,7342 DOHH2_400M_050219_1,7342,SLCALAQIDL False False FAKPENIDL 40.976951 523.780322253704 970192.6875 7329.0 nc|ENSG00000079459|P37268-4|FDFT1;;nc|ENSG00000079459|P37268-3|FDFT1;;nc|ENSG00000079459|P37268-5|FDFT1;;ENSG00000079459|ENST00000220584|FDFT1;;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;;nc|ENSG00000079459|P37268-2|FDFT1 2.445097327232361 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7343 40.984 378.0 256110.0 25 0 18702.0 + 12443 GTVYEDLRY 9 115 558.2720618531396 1114.529570773079 2 558.2715942263603 MULTI CID FTMS 0 0 0 7329 188884.5 0.0112166163965827 6 -0.5311126708984375 14 Unmodified _GTVYEDLRY_ chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-2|UBE2C 51.629811660486645 0.0367964933207742 1 {[SA]|[TG]}VYED{I|L}RY 9 0 + 68.294 0.0 0.0 6.1276 6.1276 91.41 0.0 0.0 0.0 45.56810945375766 14.973024840566469 14.973024840566469 15.976951859255124 0 0.6421590589602533 1.3010299956639813 0.4247425010840047 0.0 + + {[SA]|[TG]}VYED{I|L}RY;{[SA]|[TG]}VYEDYR{I|L};{[SA]|[TG]}VYH[RH][{M(Oxidation (M))|F}V];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YH[YG]RY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE[R{M(Oxidation (M))|F}]M{I|L} 6.1276;4.6941;2.3817;1.7038;1.4988 +;-;-;-;- + 298 + 1 2.231 80403.2 1.0 3851 3490 7329 DOHH2_400M_050219_1,7343 DOHH2_400M_050219_1,7343,GTVYEDLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7344 40.992 469.0 296180.0 25 0 27220.0 + 19229 LEHEYIQNF 9 136 596.7853313058945 1191.5561096785889 2 596.7861816287041 MULTI CID FTMS 0 0 0 7329 157105.90625 0.4866422347995358 -1 0.0968055725097656 15 Unmodified _LEHEYIQNF_ ENSG00000101367|ENST00000375571|MAPRE1 47.74868867922204 0.0453060283459952 1 {[YC]|[HE]}{I|L}EY{I|L}QN{M(Oxidation (M))|F} 9 2 + 70.06 0.0 0.0 5.8797 5.8797 80.769 0.0 0.0 0.0 4.414692876322718 14.973024840566469 4.414692876322718 3.0102999566398125 0 0.8494850021680094 0.0 1.2971062485323517 0.0 {[YC]|[HE]}{I|L}EY{I|L}QN{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}YE{I|L}QN{M(Oxidation (M))|F};[AG]DW{I|L}E{I|L}QN{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}EYQ{I|L}N{M(Oxidation (M))|F};{[YC]|[HE]}Y{I|L}E{I|L}QN{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}YEQ{I|L}N{M(Oxidation (M))|F};[AG]DWE{I|L}{I|L}QN{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}EY{I|L}[AG]N{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}EY{I|L}QGG{M(Oxidation (M))|F};[AG]DW{I|L}EQ{I|L}N{M(Oxidation (M))|F} 5.8797;5.627;5.5092;5.4423;5.2432;5.1897;5.1752;5.1069;5.1069;5.0718 -;-;-;-;-;-;-;-;-;- 2048 1 2.231 104661.8 1.0 3852 3490 7329 DOHH2_400M_050219_1,7344 DOHH2_400M_050219_1,7344,LEHEYIQNF True True LEHEYIQNF 40.992051 596.786181628704 1856423.75 7329.0 ENSG00000101367|ENST00000375571|MAPRE1 7.171197255452474 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7345 40.996 211.0 333490.0 25 0 43616.0 27278 PHGVKRSA 8 118 426.2472070681089 850.4798612030179 2 426.2474548220634 MULTI CID FTMS 0 0 0 7329 150043.984375 1.0 0 0.0 16 Unmodified _PHGVKRSA_ ENSG00000110696|ENST00000228136|C11orf58;ENST00000525256.1_1_11:16760235-16769724:+|nuORF 2.889219685676258 0.8067950007271085 1 {NN|[MP]|[D{I|L}]|[EV]}H 3 7 20.501 0.0 0.0 2.4106 0.0 0.0 0.0 482.29297700795854 482.29297700795854 10.122840957453684 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}H 2.4106 - 61 1 2.231 60879.7 1.0 3853 3490 7329 DOHH2_400M_050219_1,7345 DOHH2_400M_050219_1,7345,PHGVKRSA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7346 41.006 470.0 258690.0 25 0 14469.0 + 33171 SEYFRDMGY 9 139 584.2427478659131 1166.470942798626 2 584.2430297732353 MULTI CID FTMS 0 0 0 7329 140924.734375 0.9770975537197748 -1 0.0968055725097656 17 Unmodified _SEYFRDMGY_ ENSG00000114573|ENST00000273398|ATP6V1A;nc|ENSG00000114573|P38606-2|ATP6V1A 40.23920728925047 0.0741434193262949 1 {[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F} 4 5 25.445 0.0 0.0 2.1814 0.0 0.0 0.0 637.2406816642276 637.2406816642276 -6.549471895720984 0.0 -6.549471895720984 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F} 2.1814 + + 245 + 1 2.231 93608.9 1.0 3854 3490 7329 DOHH2_400M_050219_1,7346 DOHH2_400M_050219_1,7346,SEYFRDMGY True True SEYFRDMGY 41.005559 584.243029773235 994872.0625 7329.0 nc|ENSG00000114573|P38606-2|ATP6V1A;;ENSG00000114573|ENST00000273398|ATP6V1A 7.710464636484782 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7347 41.009 147.0 351260.0 25 0 28746.0 + 4814 DETDSGAGLKW 11 90 589.7700517292227 1177.5255505252453 2 589.7701293826103 MULTI CID FTMS 0 0 0 7329 130276.875 0.5034797610099739 -1 0.0968055725097656 18 Unmodified _DETDSGAGLKW_ ENSG00000160049|ENST00000377038|DFFA;nc|ENSG00000160049|O00273-2|DFFA 26.020703789607367 0.4812285719068541 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TDSQ{[VA]|[{I|L}G]}KW 10 2 + 53.677 0.0 0.0 4.5585 4.5585 79.106 0.0 0.0 0.0 40.91301229408028 9.463950151760656 9.463950151760656 6.064921830680703 0 0.7302046884880937 1.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TDSQ{[VA]|[{I|L}G]}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ESSQ{[VA]|[{I|L}G]}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TDS[AG]{[VA]|[{I|L}G]}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ESS[AG]{[VA]|[{I|L}G]}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QQKW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{[ES]|[DT]|[{I|L}C]}QQKW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[Y{M(Oxidation (M))|F}][YK]KW 4.5585;4.0434;3.7802;3.2651;2.205;1.6899;1.5195 -;-;+;-;-;-;- + 164 + 1 2.231 42533.5 1.0 3855 3490 7329 DOHH2_400M_050219_1,7347 DOHH2_400M_050219_1,7347,DETDSGAGLKW False True DETDSGAGLKW 41.008513 589.77012938261 1481390.875 7329.0 nc|ENSG00000160049|O00273-2|DFFA;;ENSG00000160049|ENST00000377038|DFFA 6.647562980651856 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7348 41.018 548.0 204240.0 25 0 10165.0 + 44771 LFRDKVVAL 9 131 530.8299364094656 0 530.8303100466728 PEAK CID FTMS 0 0 0 7329 113799.546875 1.0 0 0.0 19 Unmodified _YPLRKTVAL_ ENST00000524192.6_1_20:61904210-61909556:+|nuORF;ENSG00000101199|ENST00000370283|ARFGAP1;ENST00000519531.5_1_20:61904210-61914317:+|nuORF;nc|ENSG00000101199|Q8N6T3-5|ARFGAP1;nc|ENSG00000101199|Q8N6T3-3|ARFGAP1;nc|ENSG00000101199|Q8N6T3-2|ARFGAP1 24.020572477871973 0.1646235280836931 1 AVVW 4 8 28.563 0.0 0.0 2.6955 0.0 0.0 131.0945229109015 470.25937830142817 601.3539012123297 0.0 0.0 0.0 0.0 0 1.113982988912431 0.0 0.0 0.0 AVVW 2.6955 - 160 + 1 2.231 90765.6 1.0 3856 3490 7329 DOHH2_400M_050219_1,7348 DOHH2_400M_050219_1,7348,YPLRKTVAL False False LFRDKVVAL 41.018143 530.830310046673 650174.875 7329.0 ENST00000524192.6_1_20:61904210-61909556:+|nuORF;;ENSG00000101199|ENST00000370283|ARFGAP1;;ENST00000519531.5_1_20:61904210-61914317:+|nuORF;;nc|ENSG00000101199|Q8N6T3-5|ARFGAP1;;nc|ENSG00000101199|Q8N6T3-3|ARFGAP1;;nc|ENSG00000101199|Q8N6T3-2|ARFGAP1 2.4277780850728354 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7349 41.022 215.0 308270.0 25 0 31231.0 + 19131 TSERGSFSLY 10 84 573.7746672016418 1145.5347814700835 2 573.7749511599541 MULTI CID FTMS 0 0 0 7329 112102.5625 0.3693553664753006 -1 0.0968055725097656 20 Unmodified _LDYLTMDIY_ nc|ENSG00000140262|Q99081|TCF12;ENSG00000140262|ENST00000333725|TCF12 23.1484247019978 0.2366544122328345 1 {[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YQ]S{I|L}Y 9 5 + 41.36 0.0 0.0 3.6106 3.6106 69.284 0.0 0.0 0.0 1.6799871122562138 21.623402882972368 1.6799871122562138 0.4575749056067479 0 1.0 1.3010299956639813 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YQ]S{I|L}Y;{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[SG]{M(Oxidation (M))|F}S{I|L}Y;{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}G[YQ]S{I|L}Y;{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}G[SG]{M(Oxidation (M))|F}S{I|L}Y;{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}[NS]{M(Oxidation (M))|F}S{I|L}Y;{[TV]|[{I|L}S]}[Q{I|L}][YC(Carbamidomethyl (C))]S{I|L}Y;[{I|L}T]{[DS]|[MA]|[CV]|TT}G[YQ]S{I|L}Y;[{I|L}T]{[DS]|[MA]|[CV]|TT}G[SG]{M(Oxidation (M))|F}S{I|L}Y;[MT][Q{I|L}][YQ]S{I|L}Y;[MT][Q{I|L}][SG]{M(Oxidation (M))|F}S{I|L}Y 3.6106;3.5706;3.5706;3.5345;3.2233;3.085;2.4242;2.388;2.3211;2.2812 -;-;-;-;-;-;-;-;-;- 269 1 2.231 53726.9 1.0 3857 3490 7329 DOHH2_400M_050219_1,7349 DOHH2_400M_050219_1,7349,LDYLTMDIY False False TSERGSFSLY 41.022222 573.774951159954 1763294.625 7329.0 nc|ENSG00000140262|Q99081|TCF12;;ENSG00000140262|ENST00000333725|TCF12 3.526388088862101 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7351 41.027 51.0 981770.0 25 0 166580.0 + 11999 GPKFHAALA 9 84 456.2567024059939 910.4988518787878 2 456.2564269900322 MULTI CID FTMS 0 0 0 7350 997484.3125 0.8399695479934886 2 -0.1679878234863281 1 Unmodified _GPKFHAALA_ REV__ENSG00000150764|ENST00000440460|DIXDC1;REV__ENST00000528399.1_1_11:111808148-111844979:+|nuORF;REV__nc|ENSG00000150764|Q155Q3-4|DIXDC1;REV__nc|ENSG00000150764|Q155Q3-5|DIXDC1 1.844237919475145 0.850302753031785 1 {I|L} 1 -1 9.6777 0.0 0.0 1.0629 0.0 0.0 779.4041538580832 0.0 779.4041538580832 0.0 9.67771005386541 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0629 + + 3 + 1 2.235 43579.3 1.0 3858 3491 7350 DOHH2_400M_050219_1,7351 DOHH2_400M_050219_1,7351,GPKFHAALA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7352 41.029 82.0 640440.0 25 0 107910.0 + 42856 VVLGPPAA 8 77 362.2225275320599 722.4305021309198 2 362.2221557497978 MULTI CID FTMS 0 0 0 7350 491846.65625 0.0628242220029075 5 -0.4395980834960937 2 Unmodified _VVLGPPAA_ REV__ENST00000468758.1_1_2:134877558-135010718:+|nuORF;REV__ENST00000481801.5_1_2:134877633-135011843:+|nuORF 0.0 0.8243325171867699 1 A 1 -1 3.0989 0.0 0.0 0.42896 0.0 0.0 361.20291531626975 287.16523157291255 648.3681468891823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.42896 + + 2 + 1 2.235 48788.9 1.0 3859 3491 7350 DOHH2_400M_050219_1,7352 DOHH2_400M_050219_1,7352,VVLGPPAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7353 41.031 92.0 345000.0 25 0 36163.0 + 17008 KKAHEFLA 8 75 472.26980211483175 942.5250512964636 2 472.2696411013603 MULTI CID FTMS 0 0 0 7350 456336.625 0.8087221293045203 1 -0.0733108520507812 3 Unmodified _KKAHEFLA_ REV__ENSG00000012983|ENST00000682126|MAP4K5;REV__ENST00000554990.5_1_14:50886739-50915587:-|nuORF 2.577480529830294 0.808687252328423 1 T 1 -1 5.4846 0.0 0.0 0.5819 0.0 0.0 471.259194994892 367.1976717584594 838.4568667533515 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.5819 - 3 + 1 2.235 31229.3 1.0 3860 3491 7350 DOHH2_400M_050219_1,7353 DOHH2_400M_050219_1,7353,KKAHEFLA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7354 41.034 129.0 563070.0 25 0 77499.0 + 21020 LNVVRDRG 8 103 464.77068863589216 927.5268243385844 2 464.7703430056572 MULTI CID FTMS 0 0 0 7350 344750.46875 0.8771386586411875 1 -0.0733108520507812 4 Unmodified _LNVVRDRG_ REV__ENSG00000065183|ENST00000349139|WDR3 4.75600775471527 0.7954636275367004 1 P 1 -1 10.969 0.0 0.0 1.1826 0.0 0.0 812.4630177363367 0.0 812.4630177363367 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.1826 - 17 + 1 2.235 60998.2 1.0 3861 3491 7350 DOHH2_400M_050219_1,7354 DOHH2_400M_050219_1,7354,LNVVRDRG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7355 41.037 181.0 401910.0 25 0 32705.0 + 4804 DEQDSVRLL 9 82 537.7747645191852 1073.5349761051702 2 537.7747070193291 MULTI CID FTMS 0 0 0 7350 299588.59375 0.6199130063504834 -1 0.0915145874023437 5 Unmodified _DEQDSVRLL_ ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B 66.45667989310934 0.0225072657982126 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QDSVR{I|L}{I|L} 9 0 + 64.927 0.0 0.0 6.0479 6.0479 88.177 0.0 0.0 0.0 47.14500880477572 9.393105370789598 9.393105370789598 9.208187539523747 0 1.1989700043360187 0.0 0.8494850021680094 0.3807196863200844 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QDSVR{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[AG]DSVR{I|L}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E[WP]R{I|L}{I|L};{[{M(Oxidation (M))|F}D]|MM}Q[WP]R{I|L}{I|L};[AG]D[{I|L}T]Q{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[AG]DE[VP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[VP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L};[AG]D[{I|L}T]{I|L}{I|L}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}Q[VP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[ES]|[DT]|[{I|L}C]}[Q{I|L}]Q{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.0479;5.1902;1.6007;1.4802;0.98132;0.93504;0.7675;0.7497;0.71047;0.68503 +;-;-;-;-;-;-;-;-;- + 174 + 1 2.235 59602.0 1.0 3862 3491 7350 DOHH2_400M_050219_1,7355 DOHH2_400M_050219_1,7355,DEQDSVRLL True True DEQDSVRLL 41.037432 537.774707019329 2295417.25 7350.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 5.657669226328532 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7356 41.042 227.0 342800.0 25 0 20585.0 9048 FELHFSSF 8 117 507.23814238543736 1012.4617318376748 2 507.2383605837822 MULTI CID FTMS 0 0 0 7350 201059.734375 1.0 0 0.0 6 Unmodified _FELHFSSF_ ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408-2|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2 38.15118350030904 0.2652218139009398 1 {[QN]|[E{I|L}]|[KN]}E[KC]ASS{M(Oxidation (M))|F} 9 5 + 54.417 0.0 0.0 5.3747 5.3747 81.79 0.0 0.0 0.0 1.994203784308688 36.52549272605931 1.994203784308688 5.96723581290415 0 1.3494850021680094 0.8860566476931632 1.0 0.0 {[QN]|[E{I|L}]|[KN]}E[KC]ASS{M(Oxidation (M))|F};[TA]M[W{I|L}]ASS{M(Oxidation (M))|F};[TA][WP]{M(Oxidation (M))|F}ASS{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TP]{M(Oxidation (M))|F}ASS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[KQ]{M(Oxidation (M))|F}DS{M(Oxidation (M))|F};[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}[KC]ASS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[KQ]{M(Oxidation (M))|F}SD{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[K{I|L}]{M(Oxidation (M))|F}DS{M(Oxidation (M))|F};[TA]M[W{I|L}][MN]{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[K{I|L}]{M(Oxidation (M))|F}SD{M(Oxidation (M))|F} 5.3747;4.7853;4.7853;4.6735;3.795;2.804;2.6334;2.6226;1.5553;1.4609 -;-;-;-;-;-;-;-;-;- 231 1 2.235 66188.1 1.0 3863 3491 7350 DOHH2_400M_050219_1,7356 DOHH2_400M_050219_1,7356,FELHFSSF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7357 41.048 337.0 178840.0 25 0 15881.0 24325 MEFDTRERWEN 11 70 756.8291688317095 1511.6437847302188 2 757.3290283083916 MULTI CID FTMS 0 0 0 7350 183570.1875 0.4367355821027395 2 -0.1679878234863281 7 Unmodified _MEFDTRERWEN_ ENSG00000164258|ENST00000296684|NDUFS4;ENST00000509443.1_1_5:52942143-52954486:+|nuORF 2.9952420565917617 0.861016188266951 1 ANQQA{[C(Carbamidomethyl (C))G]|[NC]}V{M(Oxidation (M))|F}Y 10 11 56.631 0.0 0.0 3.7463 0.0 0.0 355.1551805604657 0.0 355.1551805604657 0.0 46.17336295911841 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 ANQQA{[C(Carbamidomethyl (C))G]|[NC]}V{M(Oxidation (M))|F}Y 3.7463 - 700 + 1 2.235 49101.2 1.0 3864 3491 7350 DOHH2_400M_050219_1,7357 DOHH2_400M_050219_1,7357,MEFDTRERWEN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7358 41.051 150.0 497840.0 25 0 58042.0 22979 LSGLGRSKEV 10 105 523.3031342597114 1044.5917155862228 2 523.3038207888603 MULTI CID FTMS 0 0 0 7350 173166.671875 0.1622703402312282 -8 0.6943817138671875 8 Unmodified _LSGLGRSKEV_ ENSG00000170500|ENST00000393437|LONRF2;nc|ENSG00000170500|Q1L5Z9-2|LONRF2 8.745405648335112 0.6861838735306406 1 {NN|[MP]|[D{I|L}]|[EV]}A 3 9 16.933 0.0 0.0 1.621 0.0 0.0 0.0 742.4263399713499 742.4263399713499 3.437685087259976 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}A 1.621 - 67 + 1 2.235 60675.9 1.0 3865 3491 7350 DOHH2_400M_050219_1,7358 DOHH2_400M_050219_1,7358,LSGLGRSKEV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7359 41.057 368.0 201140.0 25 0 15477.0 + 26309 NRGVIITM 8 122 452.2574807643365 902.5004085954728 2 452.2577392458916 MULTI CID FTMS 0 0 0 7350 165540.828125 1.0 0 0.0 9 Unmodified _NRGVIITM_ ENSG00000113732|ENST00000519374|ATP6V0E1;ENSG00000171130|ENST00000425642|ATP6V0E2;nc|ENSG00000171130|Q8NHE4-2|ATP6V0E2;nc|ENSG00000171130|Q8NHE4-3|ATP6V0E2;nc|ENSG00000171130|Q8NHE4-4|ATP6V0E2 34.10243960390752 0.3329570729325616 1 [RN][R{I|L}]{I|L}TM 7 2 + 38.288 0.0 0.0 4.2424 4.2424 72.41 0.0 0.0 0.0 0.9931724579825384 17.588191538938602 0.9931724579825384 1.3008871492820615 0 0.5 0.0 0.4247425010840047 0.3054621874040891 [RN][R{I|L}]{I|L}TM;[RN]K{I|L}{I|L}EM;[RN][VG]{I|L}{I|L}TM;{I|L}{I|L}{[CP]|[EA]}{I|L}{I|L}TM;{I|L}{I|L}{[RE]|[WV]}{I|L}EM;{I|L}{I|L}{I|L}{I|L}{[CP]|[EA]}TM;{I|L}{I|L}{I|L}{I|L}[TA]EM;{I|L}{I|L}{I|L}{I|L}[WD]M 4.2424;4.0983;4.0904;3.8778;2.8086;2.2214;1.3338;0.95717 -;-;+;-;-;-;-;- + 112 1 2.235 61376.2 1.0 3866 3491 7350 DOHH2_400M_050219_1,7359 DOHH2_400M_050219_1,7359,NRGVIITM False True NRGVIITM 41.057447 452.257739245892 779253.0 7350.0 ENSG00000171130|ENST00000425642|ATP6V0E2;;nc|ENSG00000171130|Q8NHE4-4|ATP6V0E2;;ENSG00000113732|ENST00000519374|ATP6V0E1;;nc|ENSG00000171130|Q8NHE4-3|ATP6V0E2;;nc|ENSG00000171130|Q8NHE4-2|ATP6V0E2 6.505186080932617 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7360 41.061 160.0 450460.0 25 0 72646.0 + 13748 HRPSHFLNF 9 81 385.5333783881493 1153.578305764648 3 385.5333434939384 MULTI CID FTMS 0 0 0 7350 158827.25 0.8097075589424946 -1 0.0915145874023437 10 Unmodified _HRPSHFLNF_ ENSG00000174231|ENST00000304992|PRPF8 9.5439744041441 0.5815088571869578 1 {M(Oxidation (M))|F} 1 8 15.485 0.0 0.0 1.3423 0.0 0.0 988.4990648972636 0.0 988.4990648972636 0.0 -0.2287874528033739 -0.2287874528033739 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.3423 + + 34 + 1 2.235 61177.3 1.0 3867 3491 7350 DOHH2_400M_050219_1,7360 DOHH2_400M_050219_1,7360,HRPSHFLNF False True HRPSHFLNF 41.060586 385.533343493938 1079956.875 7350.0 ENSG00000174231|ENST00000304992|PRPF8 7.282673994700114 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7361 41.074 800.0 242760.0 25 0 11869.0 + 13447 HLRDYFEEY 9 139 636.2879320132259 1270.5613110932518 2 636.2877075076103 MULTI CID FTMS 0 0 0 7350 147673.46875 0.5218350639120963 -1 0.0915145874023437 11 Unmodified _HLRDYFEEY_ ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000491091.1_1_3:122036542-122036854:+|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1 76.82478488871298 0.0184607444814265 1 [H{I|L}]RDY{M(Oxidation (M))|F}EEY 9 0 + 91.094 0.0 0.0 7.1696 7.1696 95.273 0.0 0.0 0.0 19.62189282359297 52.31167528634692 19.62189282359297 25.013487579716767 0 1.25 1.3979400086720375 0.3494850021680094 0.6505149978319906 + + [H{I|L}]RDY{M(Oxidation (M))|F}EEY;[H{I|L}]RD{[QS]|[NT]}SHEY;[H{I|L}]RDY[HM]HY;[H{I|L}]RDYEE{M(Oxidation (M))|F}Y;[H{I|L}]RDYN[SG]{M(Oxidation (M))|F}Y;[H{I|L}]RDD[C(Carbamidomethyl (C))R]HY;[H{I|L}]RDYN[YQ]Y;[H{I|L}]RD{[QS]|[NT]}SEHY;[H{I|L}]RDD{[NV]|[RG]}CHY;[YE][RV]H{M(Oxidation (M))|F}EEY 7.1696;5.2009;4.5121;4.4138;4.1769;4.1366;4.1366;4.0383;4.0383;4.0223 +;-;-;-;-;-;-;-;-;- + 1915 1 2.235 146239.1 0.6899999976158142 3868 3491 7350 DOHH2_400M_050219_1,7361 DOHH2_400M_050219_1,7361,HLRDYFEEY True True HLRDYFEEY 41.074423 636.28770750761 1889896.375 7350.0 ENSG00000122566|ENST00000618183|HNRNPA2B1;;nc|ENSG00000122566|P22626|HNRNPA2B1;;ENST00000491091.1_1_3:122036542-122036854:+|nuORF;;ENST00000463181.5_1_7:26232138-26237376:-|nuORF 9.386552174886068 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7362 41.082 407.0 206070.0 25 0 28752.0 + 20244 LLDIRSEY 8 97 504.7720570378175 0 504.7720825076103 PEAK CID FTMS 0 0 0 7350 115093.9765625 1.0 0 0.0 12 Unmodified _LLDIRSEY_ ENSG00000122359|ENST00000422982|ANXA11;nc|ENSG00000122359|P50995-2|ANXA11 19.256988751693697 0.4320151646958274 1 {I|L}D{I|L} 3 5 16.995 0.0 0.0 1.6868 0.0 0.0 113.08762873564258 550.2270601861936 663.3146889218363 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {I|L}D{I|L} 1.6868 + + 50 + 1 2.235 67665.1 1.0 3869 3491 7350 DOHH2_400M_050219_1,7362 DOHH2_400M_050219_1,7362,LLDIRSEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7363 41.096 800.0 81013.0 25 0 9109.9 -1 0 85 873.9150509860758 1745.8155490389515 2 874.4069091677666 MULTI CID FTMS 0 0 0 7350 97958.625 0.0169002561211452 -11 1.0327644348144531 13 1 YQA{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DP[EP] 10 -1 27.612 0.0 0.0 1.5816 0.0 0.0 571.2931996076187 0.0 571.2931996076187 0.0 6.441387883238079 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 YQA{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DP[EP] 1.5816 - 208 1 2.235 49585.2 0.5600000023841858 3870 3491 7350 DOHH2_400M_050219_1,7363 DOHH2_400M_050219_1,7363, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7365 41.101 130.0 359080.0 25 0 27153.0 + 32919 SEKLDYITY 9 88 566.2816630855351 1130.54877323787 2 566.2814819216728 MULTI CID FTMS 0 0 0 7364 214367.625 0.1625861202801355 2 -0.1997032165527343 1 Unmodified _SEKLDYITY_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000446317.1_1_20:3471092-3471287:-|nuORF;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 22.736283301280096 0.2418982879461534 1 [Y{I|L}]DM{[NV]|[RG]}{I|L}TY 9 6 [Y{I|L}]DM{[NV]|[RG]}{I|L} + + 29.024 4.2251 0.49799 2.5672 2.5672 49.592 0.0 0.0 0.0 0.0 17.0513246213088 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 [Y{I|L}]DM{[NV]|[RG]}{I|L}TY 2.5672 - 109 + 1 2.235 40525.8 1.0 3871 3492 7364 DOHH2_400M_050219_1,7365 DOHH2_400M_050219_1,7365,SEKLDYITY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7366 41.104 186.0 318740.0 25 0 12143.0 -1 0 84 910.4226577449356 1818.8307625566708 2 910.923388659954 MULTI CID FTMS 0 0 0 7364 255581.71875 0.0684212334224421 4 -0.3662872314453125 2 1 [MN]PN{I|L}NAD 8 -1 40.926 0.0 0.0 2.2501 0.0 0.0 0.0 946.4391279125598 946.4391279125598 17.281133242724405 0.0 0.0 0.0 0 0.5074908058443608 1.2218487496163564 0.0 0.4247425010840047 [MN]PN{I|L}NAD 2.2501 - 186 + 1 2.235 46123.4 1.0 3872 3492 7364 DOHH2_400M_050219_1,7366 DOHH2_400M_050219_1,7366, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7367 41.106 46.0 1707100.0 25 0 89670.0 + -1 ILGPPGSVY 9 83 902.9190298108116 1803.8235066884229 2 902.9210693240166 MULTI CID FTMS 0 0 0 7364 1282510.5 0.6826637561209686 -1 0.0733108520507812 3 ENSG00000182247|ENST00000396703|UBE2E2;nc|ENSG00000170142|P51965-3|UBE2E1;nc|ENSG00000170142|P51965-2|UBE2E1;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000170035|ENST00000410062|UBE2E3;ENST00000493707.1_1_3:23907959-23932094:+|nuORF 1 [MN]PN{I|L}NEEC(Carbamidomethyl (C)){I|L}{I|L}V[KC]Q 15 -1 + 76.314 0.0 0.0 4.2307 4.2307 83.232 0.0 0.0 0.0 50.194634427571856 9.7622580091072 9.7622580091072 10.911742928826271 0 0.6505149978319906 1.6989700043360187 0.0 1.1549471895720984 [MN]PN{I|L}NEEC(Carbamidomethyl (C)){I|L}{I|L}V[KC]Q;[MN]PN{I|L}NEE[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]PNN{I|L}EEC(Carbamidomethyl (C)){I|L}{I|L}V[KC]Q;[MN]PNN{I|L}EE[RH][Y{M(Oxidation (M))|F}]{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}VN{I|L}NEE[RH][Y{M(Oxidation (M))|F}]{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}VNN{I|L}EE[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[NP]{I|L}NM[RH]EEP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V[QP];[NP]{I|L}NM[RH]EEPQQS[QP];[NP]{I|L}NM[RH]EE{I|L}[HC]S[QP];[NP]{I|L}NM{[DS]|[MA]|[CV]|TT}[WY]N{I|L}NV[QP] 4.2307;3.6258;3.5504;3.403;2.4745;2.2518;2.0853;2.0853;1.9877;1.9301 -;-;-;-;-;-;-;-;-;- 3125 + 1 2.235 55128.1 1.0 3873 3492 7364 DOHH2_400M_050219_1,7367 DOHH2_400M_050219_1,7367, False False ILGPPGSVY 41.105644 902.921069324017 9126286.0 7364.0 ENSG00000182247|ENST00000396703|UBE2E2;;nc|ENSG00000170142|P51965-3|UBE2E1;;nc|ENSG00000170142|P51965-2|UBE2E1;;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;;ENSG00000170142|ENST00000306627|UBE2E1;;ENSG00000170035|ENST00000410062|UBE2E3;;ENST00000493707.1_1_3:23907959-23932094:+|nuORF 6.48702605565389 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7368 41.107 78.0 633680.0 25 0 59828.0 + 32807 SEFGNHYLY 9 76 565.25110493852 1128.48765694384 2 565.2511474490166 MULTI CID FTMS 0 0 0 7364 639133.375 1.0 0 0.0 4 Unmodified _SEFGNHYLY_ ENSG00000189091|ENST00000302516|SF3B3 21.53697664764585 0.2571576504437394 1 Y{M(Oxidation (M))|F}{I|L}DTY 6 7 31.643 0.0 0.0 2.804 0.0 0.0 308.1232777326188 0.0 308.1232777326188 0.0 16.938200260161125 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 Y{M(Oxidation (M))|F}{I|L}DTY 2.804 - 105 1 2.235 43826.6 1.0 3874 3492 7364 DOHH2_400M_050219_1,7368 DOHH2_400M_050219_1,7368,SEFGNHYLY False True SEFGNHYLY 41.107444 565.251147449017 3611722.25 7364.0 ENSG00000189091|ENST00000302516|SF3B3 5.372522672017415 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7369 41.109 53.0 1115700.0 25 0 106330.0 + 6259 DTRGKFIL 8 72 475.2771399102211 948.5397268872422 2 475.2770873904228 MULTI CID FTMS 0 0 0 7364 635404.0625 1.0 0 0.0 5 Unmodified _DTRGKFIL_ ENSG00000140395|ENST00000267973|SKIC8 25.399314129420983 0.5099049743284904 1 D{M(Oxidation (M))|F}{I|L}{I|L} 4 4 33.448 0.0 0.0 3.5263 0.0 0.0 442.2641773908219 0.0 442.2641773908219 0.0 18.21964723176244 0.0 0.0 0 0.6109243748081782 0.0 0.3807196863200844 0.0 D{M(Oxidation (M))|F}{I|L}{I|L} 3.5263 - 125 1 2.235 52484.3 1.0 3875 3492 7364 DOHH2_400M_050219_1,7369 DOHH2_400M_050219_1,7369,DTRGKFIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7370 41.11 69.0 931610.0 25 0 86900.0 + 25821 NLAERIKSL 9 111 522.3136884764126 1042.6128240196251 2 522.3140136599541 MULTI CID FTMS 0 0 0 7364 537347.0 0.8429077499298275 -1 0.0733108520507812 6 Unmodified _NLAERIKSL_ ENSG00000110344|ENST00000252108|UBE4A;nc|ENSG00000110344|Q14139-2|UBE4A 61.08992128646608 0.0254786290039527 1 {[QV]|[N{I|L}]|[RA]|[KV]}AER{I|L}KS{I|L} 9 0 + 63.78 0.0 0.0 6.1173 6.1173 90.446 0.0 0.0 0.0 22.800653760765726 51.01565700991933 22.800653760765726 12.390690719683093 0 2.345226667343314 2.0 0.0 0.3494850021680094 + + {[QV]|[N{I|L}]|[RA]|[KV]}AER{I|L}KS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A[{I|L}T][PS]KS{I|L} 6.1173;4.9289 +;- + 141 1 2.235 52837.3 1.0 3876 3492 7364 DOHH2_400M_050219_1,7370 DOHH2_400M_050219_1,7370,NLAERIKSL True True NLAERIKSL 41.11045 522.314013659954 3615154.0 7364.0 ENSG00000110344|ENST00000252108|UBE4A;;nc|ENSG00000110344|Q14139-2|UBE4A 5.083616415659587 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7371 41.119 500.0 234230.0 25 0 22596.0 + 36933 TEVLAPALA 9 133 442.7572265744243 883.4999002156486 2 442.7567626833916 MULTI CID FTMS 0 0 0 7364 182451.75 1.0 0 0.0 7 Unmodified _TEVLAPALA_ REV__ENSG00000112282|ENST00000368068|MED23;REV__nc|ENSG00000112282|Q9ULK4-2|MED23;REV__nc|ENSG00000112282|Q9ULK4-3|MED23;REV__nc|ENSG00000112282|Q9ULK4-4|MED23;REV__nc|ENSG00000112282|Q9ULK4-5|MED23 8.593279151180031 0.6146971463335029 1 {I|L} 1 -1 9.0908 0.0 0.0 1.029 0.0 0.0 752.4051259009987 0.0 752.4051259009987 0.0 0.1113819735557619 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.029 + + 28 + 1 2.235 95072.1 1.0 3877 3492 7364 DOHH2_400M_050219_1,7371 DOHH2_400M_050219_1,7371,TEVLAPALA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7372 41.127 437.0 337840.0 25 0 18541.0 + 29431 QLFQRPNAL 9 159 543.8062044938097 1085.5978560544193 2 543.8071166872978 MULTI CID FTMS 0 0 0 7364 170174.703125 0.4617191147858479 -2 0.164825439453125 8 Unmodified _QLFQRPNAL_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 117.59872219059416 0.0024691254995583 1 Q{I|L}{M(Oxidation (M))|F}QR[NP]A{I|L} 9 0 + 80.286 0.0 0.0 7.3955 7.3955 81.268 0.0 0.0 0.0 54.93661250471689 11.243493112325154 11.243493112325154 0.4575749056067479 0 1.2059771852360797 2.0 0.0 1.3945990182825423 + + Q{I|L}{M(Oxidation (M))|F}QR[NP]A{I|L};Q{I|L}{M(Oxidation (M))|F}GAR[NP]A{I|L};[Q{I|L}][TA]RQWA{I|L};[Q{I|L}][TA]RAGWA{I|L};[AG]{I|L}[TA]RQWA{I|L};Q{I|L}{M(Oxidation (M))|F}QR[QA][VP];[AG]{I|L}[TA]RAGWA{I|L};Q{I|L}{M(Oxidation (M))|F}GAR[QA][VP];Q{I|L}{M(Oxidation (M))|F}QR[Q{I|L}][PG];Q{I|L}{M(Oxidation (M))|F}GAR[Q{I|L}][PG] 7.3955;7.3534;6.7898;6.7477;5.5394;5.5322;5.5013;5.49;5.4048;5.3626 +;-;-;-;-;-;-;-;-;- + 5209 + 1 2.235 114968.3 1.0 3878 3492 7364 DOHH2_400M_050219_1,7372 DOHH2_400M_050219_1,7372,QLFQRPNAL True True QLFQRPNAL 41.127048 543.807116687298 2798786.0 7364.0 nc|ENSG00000134644|Q14671|PUM1;;nc|ENSG00000134644|Q14671-4|PUM1;;nc|ENSG00000134644|Q14671-2|PUM1;;ENSG00000134644|ENST00000426105|PUM1 6.854743798573812 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7373 41.135 455.0 150590.0 25 0 11912.0 -1 0 95 728.0215884360372 2181.0429359083114 3 728.3553344607353 MULTI CID FTMS 0 0 0 7364 165613.671875 1.0 0 0.0 9 1 TGYGM 5 -1 32.435 0.0 0.0 1.4871 0.0 0.0 1046.4530719955642 622.3684782879324 1668.8215502834964 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 TGYGM 1.4871 - 526 + 1 2.235 55286.6 1.0 3879 3492 7364 DOHH2_400M_050219_1,7373 DOHH2_400M_050219_1,7373, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7374 41.14 251.0 311280.0 25 0 35450.0 + 22907 LSDIVIEKY 9 109 540.3029948288679 1078.5914367245357 2 540.3032714724541 MULTI CID FTMS 0 0 0 7364 158432.109375 1.0 0 0.0 10 Unmodified _LSDIVIEKY_ ENSG00000184465|ENST00000448612|WDR27;ENST00000546953.1_1_6:170072345-170089107:-|nuORF;nc|ENSG00000184465|A2RRH5-2|WDR27;nc|ENSG00000184465|A2RRH5-3|WDR27;nc|ENSG00000184465|A2RRH5|WDR27 70.33199760932243 0.0209706178985989 1 {I|L}[PS]MV{I|L}EK 8 3 49.914 0.0 0.0 4.6277 0.0 0.0 0.0 178.05108057193596 178.05108057193596 12.55852146363172 0.0 0.0 0.0 0 0.6549471895720984 0.0 0.3252574989159953 0.6747425010840047 {I|L}[PS]MV{I|L}EK 4.6277 - 370 + 1 2.235 64230.4 1.0 3880 3492 7364 DOHH2_400M_050219_1,7374 DOHH2_400M_050219_1,7374,LSDIVIEKY True True LSDIVIEKY 41.139817 540.303271472454 959239.75 7364.0 nc|ENSG00000184465|A2RRH5-3|WDR27;;ENST00000546953.1_1_6:170072345-170089107:-|nuORF;;nc|ENSG00000184465|A2RRH5-2|WDR27;;nc|ENSG00000184465|A2RRH5|WDR27;;ENSG00000184465|ENST00000448612|WDR27 6.331392606099446 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7375 41.148 431.0 295680.0 25 0 13608.0 + 17973 KRLNFITEY 9 137 592.3273311787218 1182.6401094242435 2 592.3275634646416 MULTI CID FTMS 0 0 0 7364 151081.03125 0.7745261495472365 -1 0.0733108520507812 11 Unmodified _KRLNFITEY_ ENSG00000106683|ENST00000336180|LIMK1;ENST00000483414.1_1_7:73511493-73523492:+|nuORF;nc|ENSG00000106683|P53667-2|LIMK1;nc|ENSG00000106683|P53667-4|LIMK1 68.08070601005525 0.0218408846571049 1 {[QN]|[E{I|L}]|[KN]}[R{I|L}]{M(Oxidation (M))|F}{I|L}TEY 9 2 + 58.381 0.0 0.0 4.9365 4.9365 77.994 0.0 0.0 0.0 3.802112417116064 16.478174818886373 3.802112417116064 3.4640156839957825 0 0.9247425010840048 0.6020599913279624 0.805462187404089 0.91944517631652 {[QN]|[E{I|L}]|[KN]}[R{I|L}]{M(Oxidation (M))|F}{I|L}TEY;{[QN]|[E{I|L}]|[KN]}[R{I|L}]{M(Oxidation (M))|F}T{I|L}EY;[RK]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}TEY;[RK]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}T{I|L}EY;{[QN]|[E{I|L}]|[KN]}[R{I|L}]{M(Oxidation (M))|F}TE{I|L}Y;{[QN]|[E{I|L}]|[KN]}[R{I|L}]T{M(Oxidation (M))|F}{I|L}EY;[RK]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}TE{I|L}Y;[RK]{[QV]|[N{I|L}]|[RA]|[KV]}T{M(Oxidation (M))|F}{I|L}EY;{[QN]|[E{I|L}]|[KN]}[R{I|L}]T{M(Oxidation (M))|F}E{I|L}Y;{[QN]|[E{I|L}]|[KN]}[R{I|L}]{M(Oxidation (M))|F}[VP]{M(Oxidation (M))|F}Y 4.9365;4.6436;4.615;4.3221;3.7895;3.6217;3.468;3.3002;2.7676;2.5486 -;-;+;-;-;-;-;-;-;- + 500 1 2.235 96861.8 1.0 3881 3492 7364 DOHH2_400M_050219_1,7375 DOHH2_400M_050219_1,7375,KRLNFITEY True True KRLNFITEY 41.147502 592.327563464642 1298698.875 7364.0 ENSG00000106683|ENST00000336180|LIMK1;;nc|ENSG00000106683|P53667-2|LIMK1;;nc|ENSG00000106683|P53667-4|LIMK1;;ENST00000483414.1_1_7:73511493-73523492:+|nuORF 5.078460534413655 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7376 41.161 800.0 81742.0 25 0 4177.0 + + -1 WQEDPEPEDENLY 13 99 832.341854448068 1662.669155962936 2 832.3407470583916 MULTI CID FTMS 0 0 0 7364 85535.015625 1.0 0 0.0 12 2 Carbamidomethyl (C) _WTC(Carbamidomethyl (C))RC(Carbamidomethyl (C))CWRSWY_ nc|ENSG00000147123|Q9NX14-2|NDUFB11;ENSG00000147123|ENST00000377811|NDUFB11 0.3506318815782774 0.8734936314171269 1 [EP]DEN{I|L} 6 -1 50.411 0.0 0.0 3.0319 0.0 0.0 0.0 962.351213097072 962.351213097072 4.746687923431097 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.9291746928241128 0.6505149978319906 [EP]DEN{I|L} 3.0319 - 1055 1 2.235 48469.3 0.5400000214576721 3882 3492 7364 DOHH2_400M_050219_1,7376 DOHH2_400M_050219_1,7376,WTCRCCWRSWY False False WQEDPEPEDENLY 41.16135 832.340747058392 638495.75 7364.0 nc|ENSG00000147123|Q9NX14-2|NDUFB11;;ENSG00000147123|ENST00000377811|NDUFB11 9.927943547566732 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7377 41.176 800.0 94456.0 25 0 9644.3 -1 0 91 896.442162921657 1790.869772910114 2 896.4437744021416 MULTI CID FTMS 0 0 0 7364 80698.5 1.0 0 0.0 13 1 H{I|L}PN{I|L} 5 -1 59.24 0.0 0.0 3.3079 0.0 0.0 0.0 1213.5177706354127 1213.5177706354127 40.924778212679485 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.3807196863200844 H{I|L}PN{I|L} 3.3079 - 68 + 1 2.235 55052.7 0.5299999713897705 3883 3492 7364 DOHH2_400M_050219_1,7377 DOHH2_400M_050219_1,7377, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7378 41.19 800.0 122400.0 25 0 8431.7 + -1 SVMEANPSADLY 12 149 648.7949374593746 1295.5753219855492 2 648.7946044802666 MULTI CID FTMS 0 0 0 7364 154453.171875 1.0 0 0.0 14 Carbamidomethyl (C) _C(Carbamidomethyl (C))FLPFSFCLY_ ENSG00000241973|ENST00000255882|PI4KA;ENST00000485963.5_1_22:21152870-21213097:-|nuORF 15.847184025352805 0.5816416552707754 1 WDNC[KS]SY 8 -1 29.691 0.0 0.0 2.2917 0.0 0.0 294.1681087060554 0.0 294.1681087060554 0.0 -4.804432598655943 -4.804432598655943 0.0 0 0.0 0.0 0.2614393726401688 0.2742275032520141 WDNC[KS]SY 2.2917 - 1820 + 1 2.235 79665.8 0.6899999976158142 3884 3492 7364 DOHH2_400M_050219_1,7378 DOHH2_400M_050219_1,7378,CFLPFSFCLY False False SVMEANPSADLY 41.190204 648.794604480267 595917.0625 7364.0 ENSG00000241973|ENST00000255882|PI4KA;;ENST00000485963.5_1_22:21152870-21213097:-|nuORF 6.871202309926351 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7380 41.196 129.0 506790.0 25 0 38015.0 + 7051 EELGFRPEY 9 89 570.2719176050527 1138.5292822769054 2 570.2722045779228 MULTI CID FTMS 0 0 0 7379 377942.875 0.1505005596838851 2 -0.1783638000488281 1 Unmodified _EELGFRPEY_ ENSG00000143799|ENST00000366794|PARP1 36.506200033944 0.094635877243972 1 EE{I|L}G{M(Oxidation (M))|F}R[EP]Y 9 0 + 57.113 0.0 0.0 5.0164 5.0164 88.684 0.0 0.0 0.0 43.61818737241734 6.478174818886373 6.478174818886373 26.852771040912025 0 0.6989700043360187 1.5228787452803376 0.0 0.0 + + EE{I|L}G{M(Oxidation (M))|F}R[EP]Y;[EP]V[HT]{M(Oxidation (M))|F}G{I|L}[HC];[DP]{I|L}[HT]{M(Oxidation (M))|F}G{I|L}[HC];[QA][TA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}RW;[QA][EP][HC]{I|L}RW 5.0164;2.6578;2.1943;0.38497;0.12057 +;-;-;-;- + 132 + 1 2.235 56459.1 1.0 3885 3493 7379 DOHH2_400M_050219_1,7380 DOHH2_400M_050219_1,7380,EELGFRPEY True True EELGFRPEY 41.19625 570.272204577923 31503366.0 7379.0 ENSG00000143799|ENST00000366794|PARP1 7.316144943237305 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7381 41.199 111.0 518970.0 25 0 61313.0 + 37682 TLNEKLTAL 9 108 501.7946599745563 1001.5747670159126 2 501.7942993044853 MULTI CID FTMS 0 0 0 7379 383811.34375 0.0698118371493311 4 -0.3764533996582031 2 Unmodified _TLNEKLTAL_ ENSG00000254999|ENST00000530758|BRK1;nc|ENSG00000254999|Q8WUW1-2|BRK1 21.53697664764585 0.2571576504437394 1 [{I|L}T]NE 4 5 35.93 0.0 0.0 3.5873 0.0 0.0 0.0 541.3355806940061 541.3355806940061 18.226825097560425 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}T]NE 3.5873 + + 42 + 1 2.235 48796.2 1.0 3886 3493 7379 DOHH2_400M_050219_1,7381 DOHH2_400M_050219_1,7381,TLNEKLTAL False True TLNEKLTAL 41.198585 501.794299304485 65357568.0 7379.0 ENSG00000254999|ENST00000530758|BRK1;;nc|ENSG00000254999|Q8WUW1-2|BRK1 5.279907862345378 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7382 41.201 96.0 773860.0 25 0 51238.0 -1 RCHRRRRRCCC 11 76 866.9070431313726 1731.799533329545 2 866.9122192263603 MULTI CID FTMS 0 0 0 7379 608358.6875 0.0523975115090285 -6 0.4838638305664062 3 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 1 [MN]PN{I|L}NADQ[PA]GAN{I|L} 15 -1 83.617 0.0 0.0 4.8283 0.0 0.0 0.0 208.07283960513908 208.07283960513908 62.33078780285204 0.0 0.0 0.0 0 0.75 1.5228787452803376 0.0 1.1861818737241734 [MN]PN{I|L}NADQ[PA]GAN{I|L} 4.8283 - 2315 + 1 2.235 53957.5 1.0 3887 3493 7379 DOHH2_400M_050219_1,7382 DOHH2_400M_050219_1,7382,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7383 41.204 146.0 399910.0 25 0 38198.0 + 2651 ATDIKITVY 9 102 512.2895647266865 1022.5645765201732 2 512.2894164919853 MULTI CID FTMS 0 0 0 7379 293393.40625 0.5957307793221799 -1 0.0946769714355468 4 Unmodified _ATDIKITVY_ ENSG00000124596|ENST00000424266|OARD1 56.17704186161178 0.0281986971544335 1 {[TV]|[{I|L}S]}[K{I|L}]E[TA]VY 9 4 + 38.244 0.0 0.0 3.74 3.74 74.234 0.0 0.0 0.0 1.6723569505946756 6.702943091637209 1.6723569505946756 3.7371250542002334 0 0.9247425010840048 0.6777807052660807 1.2887254899964358 0.0 {[TV]|[{I|L}S]}[K{I|L}]E[TA]VY;{[TV]|[{I|L}S]}[R{I|L}]T[TA]VY;{[TV]|[{I|L}S]}[K{I|L}]EV[TA]Y;{[TV]|[{I|L}S]}[R{I|L}]TV[TA]Y;{[QN]|[E{I|L}]|[KN]}[R{I|L}][KC]VY 3.74;3.3745;3.3497;2.9842;2.581 -;-;-;-;- 223 1 2.235 50391.0 1.0 3888 3493 7379 DOHH2_400M_050219_1,7383 DOHH2_400M_050219_1,7383,ATDIKITVY True True ATDIKITVY 41.203635 512.289416491985 2621244.25 7379.0 ENSG00000124596|ENST00000424266|OARD1 4.505239804585774 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7384 41.206 122.0 533240.0 25 0 53984.0 + 5375 DLKKLGIL 8 98 450.29970963490894 898.5848663366179 2 450.2999755740166 MULTI CID FTMS 0 0 0 7379 284686.96875 0.7967776014640444 -1 0.0946769714355468 5 Unmodified _DLKKLGIL_ ENSG00000174059|ENST00000310833|CD34;ENST00000485761.1_1_1:208057818-208072476:-|nuORF;nc|ENSG00000174059|P28906-2|CD34 32.30548876998284 0.3644845974844379 1 D{I|L}{I|L}{I|L}D{I|L}{I|L} 7 3 45.961 0.0 0.0 5.1149 0.0 0.0 85.08977706123203 0.0 85.08977706123203 0.0 24.53479493273172 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 D{I|L}{I|L}{I|L}D{I|L}{I|L} 5.1149 - 180 1 2.235 58916.5 1.0 3889 3493 7379 DOHH2_400M_050219_1,7384 DOHH2_400M_050219_1,7384,DLKKLGIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7385 41.212 347.0 305270.0 25 0 32987.0 -1 0 83 599.6363067183453 1795.8870907552357 3 599.6359130740166 MULTI CID FTMS 0 0 0 7379 268788.40625 0.8599732646519506 -1 0.0946769714355468 6 1 [H{I|L}][NP]{I|L}C(Carbamidomethyl (C))[{M(Oxidation (M))|F}E]E{M(Oxidation (M))|F}{I|L}H{I|L}Q 14 -1 + 64.383 0.0 0.0 3.585 3.585 81.469 0.0 0.0 0.0 11.647291836125577 0.0 0.0 11.647291836125577 0 0.8807196863200843 1.6989700043360187 0.0 0.3494850021680094 [H{I|L}][NP]{I|L}C(Carbamidomethyl (C))[{M(Oxidation (M))|F}E]E{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H[VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP]{I|L}H{I|L}C(Carbamidomethyl (C))[{M(Oxidation (M))|F}E]E{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H{I|L}[CG][{M(Oxidation (M))|F}E]E{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP]{I|L}H{I|L}C(Carbamidomethyl (C))[HN][WD]{I|L}H{I|L}K;[NP]{I|L}H{I|L}C(Carbamidomethyl (C)){[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[R{I|L}]{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}H{I|L}C(Carbamidomethyl (C)){[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}K;[NP]{I|L}H{I|L}C(Carbamidomethyl (C))[HN]{[WS]|[C(Carbamidomethyl (C)){I|L}]}M{M(Oxidation (M))|F}{I|L}K;[Q{I|L}][YG]{I|L}C(Carbamidomethyl (C))[{M(Oxidation (M))|F}E]E{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP]{I|L}H{I|L}C(Carbamidomethyl (C))[HN]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Q 3.585;2.9365;2.9145;2.4106;2.3733;2.3591;2.261;2.1914;2.1076;2.0934 -;-;-;-;-;-;-;-;-;- 707 1 2.235 87682.1 1.0 3890 3493 7379 DOHH2_400M_050219_1,7385 DOHH2_400M_050219_1,7385, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7386 41.218 288.0 177690.0 25 0 25245.0 + 785 AESKKRATK 9 90 509.8041028746115 0 509.8043090701103 PEAK CID FTMS 0 0 0 7379 189817.46875 0.6875356690823733 6 -0.5822219848632812 7 Unmodified _AESKKRATK_ REV__ENST00000440408.5_1_Y:14774428-14774548:+|nuORF 2.059750862983233 0.3444685223463734 1 C 1 -1 4.6041 0.0 0.0 0.45245 0.0 0.0 632.4088211283262 279.14475427799067 911.5535754063168 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.45245 - 3 + 1 2.235 46905.8 1.0 3891 3493 7379 DOHH2_400M_050219_1,7386 DOHH2_400M_050219_1,7386,AESKKRATK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7387 41.232 800.0 246360.0 25 0 36101.0 + 6830 EEAWINEKM 9 176 575.2660161720006 1148.5174794108011 2 575.2664062380791 MULTI CID FTMS 0 0 0 7379 125088.4609375 1.0 0 0.0 8 Unmodified _EEAWINEKM_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 57.72198328787511 0.0273433238377839 1 EEAW{I|L}NEKM 9 0 + 66.086 0.0 0.0 5.7541 5.7541 82.161 0.0 0.0 0.0 22.632192780232785 4.679778752797922 4.679778752797922 4.679778752797922 0 0.6505149978319906 1.6989700043360187 0.3252574989159953 0.5796896906561032 + + EEAW{I|L}NEKM;EEAW{I|L}NEMK;EEAGE{I|L}NEKM;EEAW{I|L}GGEKM;EEAGE{I|L}NEMK;EEAW{I|L}N[QP]Y;EEAW{I|L}GGEMK;EEAGE{I|L}GGEKM;EEAGE{I|L}N[QP]Y;EEAW{I|L}N[VS]AM 5.7541;5.3466;5.0773;4.9523;4.6698;4.6246;4.5449;4.2793;3.9478;3.881 +;-;-;-;-;-;-;-;-;- + 1084 + 1 2.235 149222.1 0.6399999856948853 3892 3493 7379 DOHH2_400M_050219_1,7387 DOHH2_400M_050219_1,7387,EEAWINEKM True True EEAWINEKM 41.231537 575.266406238079 599314.8125 7379.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 6.151010990142822 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7388 41.245 800.0 129920.0 25 0 19023.0 31365 RNKEVKVAL 9 157 528.83032067843 1055.64608842366 2 528.8295776247978 MULTI CID FTMS 0 0 0 7379 103274.578125 0.8776406274274439 3 -0.2716102600097656 9 Unmodified _RNKEVKVAL_ ENSG00000186881|ENST00000334726|OR13F1 7.910154910731844 0.6385446671287552 1 S{I|L} 2 8 16.479 0.0 0.0 1.5611 0.0 0.0 837.5192401344005 0.0 837.5192401344005 0.0 2.5 0.0 0.0 0 0.0 0.0 0.25 0.0 S{I|L} 1.5611 - 139 + 1 2.235 83095.2 0.5600000023841858 3893 3493 7379 DOHH2_400M_050219_1,7388 DOHH2_400M_050219_1,7388,RNKEVKVAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7389 41.252 383.0 120590.0 25 0 4065.2 -1 0 86 917.4314936076664 1832.8484342821328 2 917.4354125857352 MULTI CID FTMS 0 0 0 7379 215338.640625 0.1220016208488454 3 -0.2716102600097656 10 1 [NP]{I|L}NQP{[SA]|[TG]}QAEN{NN|[MP]|[D{I|L}]|[EV]}P[EP] 17 -1 + 38.513 0.0 0.0 2.1013 2.1013 81.469 0.0 0.0 0.0 5.934598195660442 15.96456438146555 5.934598195660442 38.512745477117406 0 0.0 0.0 0.3807196863200844 0.0 [NP]{I|L}NQP{[SA]|[TG]}QAEN{NN|[MP]|[D{I|L}]|[EV]}P[EP] 2.1013 - 304 1 2.235 35385.7 1.0 3894 3493 7379 DOHH2_400M_050219_1,7389 DOHH2_400M_050219_1,7389, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7390 41.266 800.0 92845.0 25 0 4679.0 -1 WRFMRFWCTYH 11 100 845.8774927584991 1689.740432583798 2 846.3790771365166 MULTI CID FTMS 0 0 0 7379 114346.40625 1.0 0 0.0 11 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))WRFM(Oxidation (M))RFWCTYH_ L1PB1_dup10052|chr12:47254957-47257203:+|1.548341044108226|0.3758641288713036|2.04|48.0|74|1|anti-sense 0.0 0.8751479354844584 1 [YQ]SDEAQQNA{M(Oxidation (M))|F} 11 -1 66.702 0.0 0.0 3.9474 0.0 0.0 0.0 405.1800802456104 405.1800802456104 50.007800177983256 0.0 0.0 0.0 0 0.5 0.0 0.0 0.6989700043360187 [YQ]SDEAQQNA{M(Oxidation (M))|F} 3.9474 - 1047 1 2.235 55842.8 0.6000000238418579 3895 3493 7379 DOHH2_400M_050219_1,7390 DOHH2_400M_050219_1,7390,WRFMRFWCTYH False False False False ERV PXD020620_cell_line DOHH2_400M_050219_1 7391 41.281 800.0 91912.0 25 0 5748.5 + -1 SEGEWASGGVRSF 13 110 684.8130480031363 0 684.8115722537041 PEAK CID FTMS 0 0 0 7379 107697.34375 1.0 0 0.0 12 Carbamidomethyl (C) _ESEGEFC(Carbamidomethyl (C))RKNI_ ENSG00000126432|ENST00000265462|PRDX5;nc|ENSG00000126432|P30044-3|PRDX5;nc|ENSG00000126432|P30044-4|PRDX5 15.248480904072842 0.4017935032673427 1 GEWASGR 7 -1 63.69 0.0 0.0 4.657 0.0 0.0 216.0792535734097 405.1889742486938 621.2682278221035 0.0 0.0 0.0 0.0 0 2.055462187404089 0.0 0.805462187404089 0.0 GEWASGR 4.657 - 218 + 1 2.235 57879.9 0.6100000143051147 3896 3493 7379 DOHH2_400M_050219_1,7391 DOHH2_400M_050219_1,7391,ESEGEFCRKNI False False SEGEWASGGVRSF 41.281401 684.811572253704 453691.84375 7379.0 ENSG00000126432|ENST00000265462|PRDX5;;nc|ENSG00000126432|P30044-3|PRDX5;;nc|ENSG00000126432|P30044-4|PRDX5 7.042001565297444 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7392 41.295 800.0 145690.0 25 0 7184.9 -1 DTRMCLPGM 9 179 548.7319771402009 0 548.7317382693291 PEAK CID FTMS 0 0 0 7379 96974.6484375 1.0 0 0.0 13 Carbamidomethyl (C),Oxidation (M) _DTRM(Oxidation (M))C(Carbamidomethyl (C))LPGM_ ENST00000396720.7_1_19:48205914-48206013:+|nuORF 21.74664581756881 0.185237546287679 1 {M(Oxidation (M))|F}VKGR 5 -1 13.549 0.0 0.0 1.2369 0.0 0.0 292.02184875272354 213.0521486871704 505.0739974398939 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.2742275032520141 {M(Oxidation (M))|F}VKGR 1.2369 - 147 + 1 2.235 91666.6 0.5799999833106995 3897 3493 7379 DOHH2_400M_050219_1,7392 DOHH2_400M_050219_1,7392,DTRMCLPGM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7394 41.3 35.0 1466500.0 25 0 338130.0 30247 QWVKLNLG 8 69 479.27752848024926 956.5405040272984 2 479.2775451540947 MULTI CID FTMS 0 0 0 7393 1559439.625 0.7536403701075665 4 -0.3999366760253906 1 Unmodified _QWVKLNLG_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.248 44939.5 1.0 3898 3494 7393 DOHH2_400M_050219_1,7394 DOHH2_400M_050219_1,7394,QWVKLNLG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7395 41.302 110.0 511330.0 25 0 99161.0 30333 RAFILIQN 8 81 487.7910707870828 973.5675886409656 2 487.7908813357353 MULTI CID FTMS 0 0 0 7393 607636.1875 0.7312912265172359 2 -0.1665840148925781 2 Unmodified _RAFILIQN_ ENST00000474427.6_1_6:134491831-134492053:-|nuORF 5.230669730166228 0.792582437072536 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.248 47819.8 1.0 3899 3494 7393 DOHH2_400M_050219_1,7395 DOHH2_400M_050219_1,7395,RAFILIQN False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7396 41.305 110.0 475270.0 25 0 81180.0 + 23548 LTLQRGSH 8 78 456.2567024059939 910.4988518787878 2 456.2565795779228 MULTI CID FTMS 0 0 0 7393 454021.09375 0.3823257048934259 5 -0.4771957397460937 3 Unmodified _LTLQRGSH_ REV__ENSG00000036257|ENST00000264414|CUL3;REV__nc|ENSG00000036257|Q13618-2|CUL3;REV__nc|ENSG00000036257|Q13618-3|CUL3 2.302733041254933 0.8103549651115762 1 E 1 -1 6.9897 0.0 0.0 0.76768 0.0 0.0 455.2610111578878 323.1715181940063 778.4325293518941 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 E 0.76768 - 7 + 1 2.248 43460.3 1.0 3900 3494 7393 DOHH2_400M_050219_1,7396 DOHH2_400M_050219_1,7396,LTLQRGSH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7397 41.307 121.0 333970.0 25 0 34408.0 + 43414 WREAVLVA 8 79 472.26980211483175 942.5250512964636 2 472.2698547244072 MULTI CID FTMS 0 0 0 7393 391975.375 0.6946607888528294 4 -0.3999366760253906 4 Unmodified _WREAVLVA_ REV__ENSG00000178297|ENST00000696167|TMPRSS9;REV__nc|ENSG00000178297|Q7Z410|TMPRSS9 5.230669730166228 0.792582437072536 1 {I|L} 1 -1 10.485 0.0 0.0 1.1124 0.0 0.0 811.4302312054464 0.0 811.4302312054464 0.0 5.568109453757656 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1124 + + 10 + 1 2.248 37597.3 1.0 3901 3494 7393 DOHH2_400M_050219_1,7397 DOHH2_400M_050219_1,7397,WREAVLVA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7398 41.31 161.0 675270.0 25 0 56546.0 + 11303 GEVLISRVY 9 114 518.2954786421668 1034.5764043511335 2 518.2958862185478 MULTI CID FTMS 0 0 0 7393 362631.5625 0.243016236809634 -2 0.1997032165527343 5 Unmodified _GEVLISRVY_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 40.23920728925047 0.0741434193262949 1 {[DA]|[EG]}V{I|L}{I|L}SRVY 9 0 + 74.536 0.0 0.0 7.2045 7.2045 95.536 0.0 0.0 0.0 51.7932203927169 12.976599227271848 12.976599227271848 26.18562527100117 0 1.8494850021680087 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}V{I|L}{I|L}SRVY;{[DA]|[EG]}V{I|L}{I|L}S[{I|L}P][HA];{[DA]|[EG]}V{I|L}{I|L}[YR][VS];{[DA]|[EG]}V{I|L}[TP][{I|L}V][HA];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}VWVY;{[SA]|[TG]}V[{I|L}V]VWVY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}V]VWVY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}V{[DA]|[EG]}VY;{[TV]|[{I|L}S]}R{I|L}V{[DA]|[EG]}VY;{[TV]|[{I|L}S]}G[{I|L}V]VWVY 7.2045;4.6734;4.357;2.861;1.3484;1.3125;0.9539;0.45311;0.1251;0.1251 +;-;-;-;-;-;-;-;-;- + 171 + 1 2.248 83520.8 1.0 3902 3494 7393 DOHH2_400M_050219_1,7398 DOHH2_400M_050219_1,7398,GEVLISRVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7399 41.314 176.0 567950.0 25 0 108010.0 + 32716 SEALPSRVSF 10 74 546.7880418405895 1091.5615307479788 2 546.7880737185478 MULTI CID FTMS 0 0 0 7393 303531.3125 0.4316612363489884 -1 0.1050262451171875 6 Unmodified _SEALPSRVSF_ ENST00000455773.7_1_10:12238257-12240732:+|nuORF 37.07464296494664 0.1884581770199685 1 [{I|L}A]{[MG]|[TS]}[TA]{M(Oxidation (M))|F}{I|L}A 9 8 37.342 0.0 0.0 3.421 0.0 0.0 0.0 213.0520055415444 213.0520055415444 25.12333735073725 0.0 0.0 0.0 0 1.424742501084005 1.3010299956639813 0.7742275032520141 0.0 [{I|L}A]{[MG]|[TS]}[TA]{M(Oxidation (M))|F}{I|L}A 3.421 - 150 1 2.248 82791.8 1.0 3903 3494 7393 DOHH2_400M_050219_1,7399 DOHH2_400M_050219_1,7399,SEALPSRVSF False True SEALPSRVSF 41.313893 546.788073718548 4045308.25 7393.0 ENST00000455773.7_1_10:12238257-12240732:+|nuORF 4.349265734354655 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7400 41.318 189.0 468200.0 25 0 36848.0 6588 EAPNQEKVSDY 11 118 640.293637828739 1278.5727227242778 2 640.2941772341728 MULTI CID FTMS 0 0 0 7393 304495.84375 0.8288997846991892 -1 0.1050262451171875 7 Unmodified _EAPNQEKVSDY_ ENSG00000132646|ENST00000379143|PCNA 29.84058131909904 0.3915366693542702 1 {[YD]|[{M(Oxidation (M))|F}M]}[YV]{I|L}E{I|L}SDY 10 7 + 83.198 0.0 0.0 6.5071 6.5071 93.242 0.0 0.0 0.0 16.73393743112328 60.19585969540586 16.73393743112328 21.237125054200234 0 1.7614393726401687 1.3979400086720375 2.096910013008056 0.0 {[YD]|[{M(Oxidation (M))|F}M]}[YV]{I|L}E{I|L}SDY;{[YD]|[{M(Oxidation (M))|F}M]}[YV]{I|L}T{I|L}DDY;{[YD]|[{M(Oxidation (M))|F}M]}[YV]{I|L}TPMDY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SDY;{[YD]|[{M(Oxidation (M))|F}M]}[YV][TP]{I|L}MDY 6.5071;4.8461;4.6106;3.8804;3.584 -;-;-;-;- 362 1 2.248 67982.1 1.0 3904 3494 7393 DOHH2_400M_050219_1,7400 DOHH2_400M_050219_1,7400,EAPNQEKVSDY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7401 41.321 192.0 289350.0 25 0 30782.0 + 24449 MHIPTGVI 8 89 434.242662895386 866.470772857572 2 434.2427245974541 MULTI CID FTMS 0 0 0 7393 275855.875 0.5926263390990851 2 -0.1665840148925781 8 Unmodified _MHIPTGVI_ REV__ENSG00000133059|ENST00000367162|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-3|DSTYK 2.889219685676258 0.8067950007271085 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.248 47182.7 1.0 3905 3494 7393 DOHH2_400M_050219_1,7401 DOHH2_400M_050219_1,7401,MHIPTGVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7402 41.324 167.0 361570.0 25 0 45569.0 13205 HGLRKTTD 8 100 464.2531319523082 926.4917109714164 2 464.2531005740166 MULTI CID FTMS 0 0 0 7393 176072.03125 0.6294034351457994 4 -0.3999366760253906 9 Unmodified _HGLRKTTD_ ENST00000515347.2_1_5:79584647-79585058:+|nuORF 2.577480529830294 0.808687252328423 1 P 1 8 10.181 0.0 0.0 1.0989 0.0 0.0 811.4279959219032 0.0 811.4279959219032 0.0 0.2662275597661256 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.0989 - 10 + 1 2.248 50933.4 1.0 3906 3494 7393 DOHH2_400M_050219_1,7402 DOHH2_400M_050219_1,7402,HGLRKTTD False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7403 41.334 532.0 312960.0 25 0 68774.0 + 29910 QSEDFATYY 9 149 562.232386210688 1122.450219488176 2 562.2323486208916 MULTI CID FTMS 0 0 0 7393 165043.453125 0.1667559323275462 -2 0.1997032165527343 10 Unmodified _QSEDFATYY_ nc|ENSG00000239819|A0A087WSZ0|IGKV1D-8;nc|ENSG00000240671|A0A0C4DH67|IGKV1-8 85.64151623876279 0.0161498729896241 1 {[QS]|[NT]}ED{M(Oxidation (M))|F}ATYY 9 0 + 55.106 0.0 0.0 4.9094 4.9094 82.178 0.0 0.0 0.0 8.25052902631409 6.439389643433628 6.439389643433628 8.25052902631409 0 0.3182503180159344 0.4685210829577448 2.0858317385287872 1.721848749616356 + + {[QS]|[NT]}ED{M(Oxidation (M))|F}ATYY;{[ES]|[DT]|[{I|L}C]}QD{M(Oxidation (M))|F}ATYY;[QT]DD{M(Oxidation (M))|F}ATYY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SQ{M(Oxidation (M))|F}ATYY;{[ES]|[DT]|[{I|L}C]}DQ{M(Oxidation (M))|F}ATYY;{[MS]|[{M(Oxidation (M))|F}A]}TDDGATYY;{[QS]|[NT]}ED[TA]{M(Oxidation (M))|F}YY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F}QATYY;{[ES]|[DT]|[{I|L}C]}D{M(Oxidation (M))|F}QATYY;{[MS]|[{M(Oxidation (M))|F}A]}DTDGATYY 4.9094;4.1744;4.13;3.8442;3.8074;2.5921;2.573;2.4776;2.4408;2.4376 +;-;-;-;-;-;-;-;-;- + 2211 1 2.248 126191.3 1.0 3907 3494 7393 DOHH2_400M_050219_1,7403 DOHH2_400M_050219_1,7403,QSEDFATYY True True QSEDFATYY 41.333849 562.232348620892 5656079.0 7393.0 nc|ENSG00000240671|A0A0C4DH67|IGKV1-8;;nc|ENSG00000239819|A0A087WSZ0|IGKV1D-8 7.251829465230306 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7404 41.337 138.0 408630.0 25 0 37021.0 33137 SEVDVLHWS 9 106 536.258797948199 1070.503042963198 2 536.7562744021416 MULTI CID FTMS 0 0 0 7393 164142.53125 0.0251739336862496 10 -0.9399871826171876 11 Unmodified _SEVDVLHWS_ ENSG00000128578|ENST00000249344|STRIP2;nc|ENSG00000128578|Q9ULQ0-2|STRIP2 19.256988751693697 0.3154191944385105 1 {NN|[MP]|[D{I|L}]|[EV]}{[CP]|[EA]}{I|L}VD 7 6 30.507 0.0 0.0 2.8497 0.0 0.0 0.0 312.1192898716542 312.1192898716542 11.592116249424503 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[CP]|[EA]}{I|L}VD 2.8497 - 255 1 2.248 48480.1 1.0 3908 3494 7393 DOHH2_400M_050219_1,7404 DOHH2_400M_050219_1,7404,SEVDVLHWS False True TSQDVLHSW 41.336649 536.756274402142 926400.75 7393.0 ENSG00000198712|ENST00000361739|MT-CO2 4.411249319712321 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7405 41.344 386.0 258060.0 25 0 11984.0 + 7802 ELIHRYVEL 9 138 586.3287242151195 1170.6428954970388 2 586.3268920779228 MULTI CID FTMS 0 0 0 7393 147609.828125 1.0 0 0.0 12 Unmodified _ELIHRYVEL_ ENSG00000106367|ENST00000337619|AP1S1;nc|ENSG00000106367|P61966-2|AP1S1 53.40400417844725 0.0329064971918313 1 {[QN]|[E{I|L}]|[KN]}SQQ{I|L}{I|L}VE{I|L} 10 5 + 53.94 0.0 0.0 4.6078 4.6078 73.53 0.0 0.0 0.0 3.807196863200844 15.026975159433526 3.807196863200844 1.2368768575584568 0 0.7614393726401688 2.0 1.8243923658886187 0.0 {[QN]|[E{I|L}]|[KN]}SQQ{I|L}{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}H[YR]VE{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}[DN]{I|L}{I|L}E{I|L};[{I|L}T]DQQ{I|L}{I|L}VE{I|L};[{I|L}T][W{M(Oxidation (M))|F}]H{I|L}{I|L}E{I|L};[{I|L}T]T[MT]H{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}SQQ[{I|L}V]{I|L}E{I|L};[{I|L}T]T[RN][EP]VE{I|L};{[QN]|[E{I|L}]|[KN]}SVV{[{M(Oxidation (M))|F}H]|[RQ]}VE{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}[WR]{I|L}E{I|L} 4.6078;4.5021;4.4735;4.2825;4.213;4.1062;4.0554;4.0359;3.9536;3.9155 -;+;-;-;-;-;-;-;-;- + 979 1 2.248 82058.9 1.0 3909 3494 7393 DOHH2_400M_050219_1,7405 DOHH2_400M_050219_1,7405,ELIHRYVEL True True ELIHRYVEL 41.343574 586.326892077923 775172.5 7393.0 ENSG00000106367|ENST00000337619|AP1S1;;nc|ENSG00000106367|P61966-2|AP1S1 -0.2912148237228393 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7406 41.35 352.0 198190.0 25 0 16698.0 + 13778 HSGPPIVI 8 119 410.2401042054949 818.4656554777898 2 410.2394897341728 MULTI CID FTMS 0 0 0 7393 120084.96875 1.0 0 0.0 13 Unmodified _HSGPPIVI_ ENSG00000167173|ENST00000394987|C15orf39;nc|nan|Q6ZRI6-2|C15orf39 24.67388899826682 0.525179942228231 1 V{I|L} 2 6 20.573 0.0 0.0 2.5136 0.0 0.0 588.3019877305227 0.0 588.3019877305227 0.0 14.886831541432311 0.0 0.0 0 0.5 0.0 0.0 0.0 + V{I|L} 2.5136 + + 36 + 1 2.248 58001.5 1.0 3910 3494 7393 DOHH2_400M_050219_1,7406 DOHH2_400M_050219_1,7406,HSGPPIVI False True HSGPPIVI 41.349913 410.239489734173 1036988.5 7393.0 nc|nan|Q6ZRI6-2|C15orf39;;ENSG00000167173|ENST00000394987|C15orf39 5.455025990804036 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7407 41.364 800.0 116980.0 25 0 12702.0 -1 0 94 898.9516636141232 1795.8887742950462 2 899.4529296755791 MULTI CID FTMS 0 0 0 7393 107212.140625 1.0 0 0.0 14 1 Q 1 -1 13.495 0.0 0.0 0.75143 0.0 0.0 1649.8196500048102 0.0 1649.8196500048102 0.0 -4.69273760456403 -4.69273760456403 0.0 0 0.0 0.0 0.0 0.0 Q 0.75143 - 28 + 1 2.248 67105.2 0.5699999928474426 3911 3494 7393 DOHH2_400M_050219_1,7407 DOHH2_400M_050219_1,7407, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7408 41.369 189.0 601230.0 25 0 50272.0 + + 6265 SESFPHPGF 9 139 502.7297914231583 1003.4450299131164 2 502.7268859744072 MULTI CID FTMS 0 0 0 7393 177652.421875 1.0 0 0.0 15 Unmodified _DTSYRICF_ ENSG00000167748|ENST00000301420|KLK1;ENST00000593859.5_1_19:51323389-51327022:-|nuORF;nc|ENSG00000167748|P06870-2|KLK1 23.1484247019978 0.5573009939494978 1 {[ES]|[DT]|[{I|L}C]}S{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}[PG] 9 -1 + 16.743 0.0 0.0 1.6686 1.6686 77.607 0.0 0.0 0.0 -0.2673244316143375 0.0436480540244943 -0.2673244316143375 9.788337737651144 0 0.3054621874040891 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}S{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}[PG];{[ES]|[DT]|[{I|L}C]}[YR]YTW;{[ES]|[DT]|[{I|L}C]}S{M(Oxidation (M))|F}[YR]C{I|L};{[ES]|[DT]|[{I|L}C]}[YR][HC]P{I|L} 1.6686;0.69312;0.55814;0.0027788 -;-;-;- 294 + 1 2.248 91315.1 1.0 3912 3494 7393 DOHH2_400M_050219_1,7408 DOHH2_400M_050219_1,7408,DTSYRICF False False SESFPHPGF 41.368567 502.726885974407 1254988.125 7393.0 ENSG00000167748|ENST00000301420|KLK1;;ENST00000593859.5_1_19:51323389-51327022:-|nuORF;;nc|ENSG00000167748|P06870-2|KLK1 5.51015567779541 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7410 41.375 96.0 567100.0 25 0 27222.0 -1 0 68 902.9190298108116 1803.8235066884229 2 902.9184448122978 MULTI CID FTMS 0 0 0 7409 484104.65625 0.2576826489851548 2 -0.198089599609375 1 1 [MN]PN{I|L}NEE[{I|L}V]K[C(Carbamidomethyl (C))C]{I|L}Q 15 -1 + 100.29 0.0 0.0 5.56 5.56 87.136 0.0 0.0 0.0 78.21362981190545 7.904849854573683 7.904849854573683 9.2478773067036 0 1.086696871556164 1.5228787452803376 0.2887254899964357 1.6237125054200234 [MN]PN{I|L}NEE[{I|L}V]K[C(Carbamidomethyl (C))C]{I|L}Q;[MN]PN{I|L}NEE[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]P[HV]RQEEN{I|L}D[WH];[MN]PN{I|L}NEE[RH][H{I|L}][WD];[MN]P[HV]RQEEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]P[HV]RQEEGG{I|L}D[WH];[MN]P[HV]R[AG]EEN{I|L}D[WH];[NP]M[HV]RQEEN{I|L}D[WH];[MN][YN]K[{I|L}V]EEN{I|L}D[WH];[NP]{I|L}NM[RH]EEN{I|L}D[WH] 5.56;5.0473;4.1479;4.0786;3.813;3.6462;3.6462;3.4139;3.3163;3.3132 -;-;-;-;-;-;-;-;-;- 876 + 1 2.263 42692.1 1.0 3913 3495 7409 DOHH2_400M_050219_1,7410 DOHH2_400M_050219_1,7410, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7411 41.377 92.0 585140.0 25 0 69730.0 + 13743 HRLKMLTF 8 98 523.3031342597114 1044.5917155862228 2 523.3026000857353 MULTI CID FTMS 0 0 0 7409 292991.40625 0.2745552285680752 -4 0.3463516235351562 2 Unmodified _HRLKMLTF_ REV__ENSG00000124357|ENST00000244204|NAGK;REV__ENST00000437460.1_1_2:71405726-71405900:+|nuORF;REV__ENST00000498022.1_1_2:71304672-71305635:+|nuORF;REV__nc|ENSG00000124357|Q9UJ70-2|NAGK 5.760428011301431 0.7893668129297577 1 VE{[RE]|[WV]}T{M(Oxidation (M))|F} 6 -1 29.742 0.0 0.0 2.8472 0.0 0.0 265.21306675985403 0.0 265.21306675985403 0.0 18.315016636499024 0.0 0.0 0 0.0 0.0 1.1237125054200234 0.3054621874040891 VE{[RE]|[WV]}T{M(Oxidation (M))|F} 2.8472 - 184 + 1 2.263 46421.0 1.0 3914 3495 7409 DOHH2_400M_050219_1,7411 DOHH2_400M_050219_1,7411,HRLKMLTF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7412 41.379 114.0 456010.0 25 0 25960.0 + 2537 ASEFGNHYLY 10 83 600.7698931157229 1199.5252332982457 2 600.7703735232353 MULTI CID FTMS 0 0 0 7409 427383.78125 1.0 0 0.0 3 Unmodified _ASEFGNHYLY_ ENSG00000189091|ENST00000302516|SF3B3 51.629811660486645 0.0705852162080619 1 {[SA]|[TG]}E[PS]{M(Oxidation (M))|F}{I|L}{[WT]|[RM]}Y 10 6 + 51.99 0.0 0.0 4.3342 4.3342 71.339 0.0 0.0 0.0 7.318594041749286 12.04119982655925 7.318594041749286 0.2680249241196719 0 1.0 1.2218487496163564 0.7887254899964358 0.0 {[SA]|[TG]}E[PS]{M(Oxidation (M))|F}{I|L}{[WT]|[RM]}Y;{[SA]|[TG]}E[PS]{M(Oxidation (M))|F}{[WT]|[RM]}{I|L}Y;{[SA]|[TG]}E[PS]{I|L}{M(Oxidation (M))|F}{[WT]|[RM]}Y;{[SA]|[TG]}E[PS]{[CP]|[EA]}AY{I|L}Y;{[ES]|[DT]|[{I|L}C]}A[PS]{M(Oxidation (M))|F}E{[SA]|[TG]}{I|L}Y;{[SA]|[TG]}E{M(Oxidation (M))|F}R[WE]{I|L}Y;{[ES]|[DT]|[{I|L}C]}A[PS]{M(Oxidation (M))|F}{I|L}E{[SA]|[TG]}Y;{[WN]|[YH]}NG{M(Oxidation (M))|F}E{[SA]|[TG]}{I|L}Y;{[ES]|[DT]|[{I|L}C]}A[PS]{M(Oxidation (M))|F}{I|L}{[WT]|[RM]}Y;{[ES]|[DT]|[{I|L}C]}A[PS]{M(Oxidation (M))|F}{[WT]|[RM]}{I|L}Y 4.3342;4.3119;4.0833;4.0646;3.7241;3.5519;3.3923;3.3833;3.3461;3.3237 -;-;-;-;-;-;-;-;-;- 1201 1 2.263 42464.0 1.0 3915 3495 7409 DOHH2_400M_050219_1,7412 DOHH2_400M_050219_1,7412,ASEFGNHYLY True True ASEFGNHYLY 41.37899 600.770373523235 2754948.25 7409.0 ENSG00000189091|ENST00000302516|SF3B3 6.529892603556315 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7413 41.381 91.0 565480.0 25 0 61694.0 + 29132 QETPPQVTF 9 90 523.7614213645996 1045.5082897959992 2 523.7615234255791 MULTI CID FTMS 0 0 0 7409 296174.15625 0.7475626411652028 -1 0.0733375549316406 4 Unmodified _QETPPQVTF_ ENSG00000159753|ENST00000334583|CARMIL2;nc|ENSG00000159753|Q6F5E8-2|CARMIL2 38.17557092003332 0.0854718145212029 1 [QP]PVT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{M(Oxidation (M))|F} 9 5 + 34.837 0.0 0.0 3.332 3.332 76.717 0.0 0.0 0.0 3.990437130769145 19.352190335775752 3.990437130769145 7.763392773898449 0 0.8182503180159344 0.0 0.4247425010840047 0.3252574989159953 [QP]PVT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{M(Oxidation (M))|F};[QT]E{[HG]|PP}QVT{M(Oxidation (M))|F};[QT]E{[HG]|PP}[AG]VT{M(Oxidation (M))|F};[QT][RH]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{M(Oxidation (M))|F} 3.332;2.5895;1.7088;0.77921 -;-;-;- 105 1 2.263 47394.2 1.0 3916 3495 7409 DOHH2_400M_050219_1,7413 DOHH2_400M_050219_1,7413,QETPPQVTF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7414 41.386 260.0 450600.0 25 0 38115.0 + 31825 RTDGKVFQF 9 114 549.2905004365474 1096.5664479398947 2 549.2905761599541 MULTI CID FTMS 0 0 0 7409 296104.40625 0.5597643131457587 -1 0.0733375549316406 5 Unmodified _RTDGKVFQF_ ENSG00000114391|ENST00000394077|RPL24 55.50274090549119 0.0285720310785888 1 {M(Oxidation (M))|F}TVV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 7 4 40.561 0.0 0.0 3.6989 0.0 0.0 210.09921593788903 0.0 210.09921593788903 0.0 16.849644620198994 0.0 0.0 0 1.2614393726401687 0.0 0.0 1.035666875892183 {M(Oxidation (M))|F}TVV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 3.6989 - 316 + 1 2.263 91239.5 1.0 3917 3495 7409 DOHH2_400M_050219_1,7414 DOHH2_400M_050219_1,7414,RTDGKVFQF True True RTDGKVFQF 41.385859 549.290576159954 2886317.25 7409.0 ENSG00000114391|ENST00000394077|RPL24 4.498681465784709 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7415 41.392 346.0 264870.0 25 0 29159.0 + 37252 TIMPKDIQL 9 131 537.7968281710507 0 537.7960693240166 PEAK CID FTMS 0 0 0 7409 149188.921875 0.4792377782732285 -1 0.0733375549316406 6 Oxidation (M) _TIM(Oxidation (M))PKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 49.55428908609986 0.0328875595922215 1 {M(Oxidation (M))|F}E 2 8 20.573 0.0 0.0 1.9163 0.0 0.0 712.4120634692514 82.06683527164296 794.4788987408944 0.0 0.0 0.0 0.0 0 1.0 0.0 0.2614393726401688 0.0 {M(Oxidation (M))|F}E 1.9163 - 199 + 1 2.263 74776.7 1.0 3918 3495 7409 DOHH2_400M_050219_1,7415 DOHH2_400M_050219_1,7415,TIMPKDIQL True False TIMPKDIQL 41.392122 537.796069324017 1870041.125 7409.0 ENSG00000278828|ENST00000685041|H3C10;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000197409|ENST00000356476|H3C4;;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000188375|ENST00000340398|H3-5;;ENSG00000277775|ENST00000618052|H3C7;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;;ENSG00000275379|ENST00000616365|H3C11;;ENSG00000163041|ENST00000366815|H3-3A 6.329853216807048 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7416 41.4 466.0 264470.0 25 0 65936.0 + 5181 DINTDGAVNF 10 148 533.2467679700397 1064.4789830068794 2 533.2463867068291 MULTI CID FTMS 0 0 0 7409 112540.0703125 1.0 0 0.0 7 Unmodified _DINTDGAVNF_ ENSG00000143546|ENST00000368733|S100A8 32.78568957990786 0.2337485590374503 1 {NN|[MP]|[D{I|L}]|[EV]}DDD{I|L} 6 7 24.538 0.0 0.0 2.3052 0.0 0.0 0.0 375.17042522783566 375.17042522783566 5.72559982972642 0.0 0.0 0.0 0 0.0 2.0 0.7742275032520141 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}DDD{I|L} 2.3052 - 438 1 2.263 97077.2 1.0 3919 3495 7409 DOHH2_400M_050219_1,7416 DOHH2_400M_050219_1,7416,DINTDGAVNF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7417 41.414 800.0 204150.0 25 0 7935.0 -1 QDMCMKVPD 9 187 578.2253168587105 1154.4360807842208 2 578.2258178591728 MULTI CID FTMS 0 0 0 7409 89529.3359375 1.0 0 0.0 8 Carbamidomethyl (C),2 Oxidation (M) _QDM(Oxidation (M))C(Carbamidomethyl (C))M(Oxidation (M))KVPD_ ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1 14.838274106304384 0.4350285940865338 1 Q 1 -1 18.979 0.0 0.0 1.644 0.0 0.0 1008.3668649412506 0.0 1008.3668649412506 0.0 1.4087877870161911 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 Q 1.644 + + 873 + 1 2.263 121560.7 0.5400000214576721 3920 3495 7409 DOHH2_400M_050219_1,7417 DOHH2_400M_050219_1,7417,QDMCMKVPD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7418 41.428 800.0 262530.0 25 0 23020.0 + 13328 HLDGQPFLRY 10 162 623.3223582802663 1244.6301636273324 2 623.3218871951103 MULTI CID FTMS 0 0 0 7409 88466.25 0.1318571252508546 -2 0.1783638000488281 9 Unmodified _HLDGQPFLRY_ ENSG00000204516|ENST00000252229|MICB;ENSG00000204520|ENST00000449934|MICA;nc|ENSG00000204516|Q29980-2|MICB 84.5221896805406 0.0133617038110099 1 H{I|L}DGQP{M(Oxidation (M))|F}{I|L}RY 10 0 + 97.354 0.0 0.0 7.8219 7.8219 90.01 0.0 0.0 0.0 34.06804392152253 7.639364381714145 7.639364381714145 7.639364381714145 0 2.642159058960253 2.0 0.0 1.1861818737241734 + + H{I|L}DGQP{M(Oxidation (M))|F}{I|L}RY;H{I|L}DGQP{M(Oxidation (M))|F}{I|L}YR;H{I|L}DG[AG]P{M(Oxidation (M))|F}{I|L}RY;H{I|L}DG[AG]P{M(Oxidation (M))|F}{I|L}YR;H{I|L}DGQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KKY;H{I|L}DGQP{M(Oxidation (M))|F}[HV]VP;H{I|L}YH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KKY;H{I|L}DG[AG]P{M(Oxidation (M))|F}[HV]VP;[H{I|L}]DGQP{M(Oxidation (M))|F}{I|L}RY;H{I|L}S{I|L}{M(Oxidation (M))|F}PQK[{M(Oxidation (M))|F}E] 7.8219;7.2081;7.0856;6.4718;5.9885;5.9661;5.2229;4.9268;4.8664;4.4338 +;-;-;-;-;-;-;-;+;- + 1432 + 1 2.263 151416.0 0.5600000023841858 3921 3495 7409 DOHH2_400M_050219_1,7418 DOHH2_400M_050219_1,7418,HLDGQPFLRY True True HLDGQPFLRY 41.428057 623.32188719511 12503519.0 7409.0 nc|ENSG00000204516|Q29980-2|MICB;;ENSG00000204520|ENST00000449934|MICA;;ENSG00000204516|ENST00000252229|MICB 10.156970977783203 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7419 41.442 800.0 177920.0 25 0 14505.0 + -1 YSAPPGDPLSTNY 13 151 691.8092180747125 1381.6038832162249 2 691.8091308474541 MULTI CID FTMS 0 0 0 7409 84841.3828125 0.6646792854388147 -1 0.0733375549316406 10 Carbamidomethyl (C) _RPQGWC(Carbamidomethyl (C))LSDTY_ nc|ENSG00000082641|Q14494-2|NFE2L1;ENSG00000082641|ENST00000362042|NFE2L1 17.11289562659939 0.6791789249425932 1 [{I|L}P]STD{[CA]|SS}P{I|L}Y 10 -1 39.694 0.0 0.0 2.873 0.0 0.0 0.0 318.1081549858731 318.1081549858731 13.742253597705025 0.0 0.0 0.0 0 0.7302046884880937 1.0969100130080565 1.4802046884880935 0.0 [{I|L}P]STD{[CA]|SS}P{I|L}Y 2.873 - 2823 1 2.263 101205.5 0.5600000023841858 3922 3495 7409 DOHH2_400M_050219_1,7419 DOHH2_400M_050219_1,7419,RPQGWCLSDTY False False YSAPPGDPLSTNY 41.441888 691.809130847454 0.0 7409.0 nc|ENSG00000082641|Q14494-2|NFE2L1;;ENSG00000082641|ENST00000362042|NFE2L1 7.775329271952311 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7420 41.447 247.0 142950.0 25 0 6412.5 -1 0 74 910.4226577449356 1818.8307625566708 2 910.9194213747978 MULTI CID FTMS 0 0 0 7409 177088.4375 0.047407965553495 7 -0.7111358642578125 11 1 [NP]{I|L}N[TA]V 7 -1 25.979 0.0 0.0 1.4283 0.0 0.0 0.0 1106.4346193284084 1106.4346193284084 14.385022913264509 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.4247425010840047 0.3807196863200844 [NP]{I|L}N[TA]V 1.4283 - 188 1 2.263 31756.0 1.0 3923 3495 7409 DOHH2_400M_050219_1,7420 DOHH2_400M_050219_1,7420, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7421 41.462 800.0 252110.0 25 0 59997.0 + 29133 QETPPQVTF 9 117 1046.5147711834 1045.5074947168 1 1046.514086902142 MULTI CID FTMS 0 0 0 7409 167371.609375 0.8168037285801998 -1 0.0733375549316406 12 Unmodified _QETPPQVTF_ ENSG00000159753|ENST00000334583|CARMIL2;nc|ENSG00000159753|Q6F5E8-2|CARMIL2 80.6760300276096 0.0173529540220427 1 {[QV]|[N{I|L}]|[RA]|[KV]}PPTQET{M(Oxidation (M))|F} 9 4 + 73.427 0.0 0.0 7.0231 7.0231 85.019 0.0 0.0 0.0 10.969100130080562 16.478174818886373 10.969100130080562 3.776362525516532 0 0.0 1.3979400086720375 1.1989700043360187 0.7614393726401688 {[QV]|[N{I|L}]|[RA]|[KV]}PPTQET{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}PPTTQE{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}PTPQET{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}PPT[AG]ET{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}PPTQTE{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}PPQETT{M(Oxidation (M))|F};[QP]PVTQET{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}PPQTET{M(Oxidation (M))|F};[QP]PTEQVT{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}PTPTQE{M(Oxidation (M))|F} 7.0231;6.6619;6.2147;6.1423;6.0628;6.0409;5.9739;5.9483;5.8864;5.8535 -;-;-;-;-;-;-;-;-;- 3841 1 2.263 128506.4 0.6800000071525574 3924 3495 7409 DOHH2_400M_050219_1,7421 DOHH2_400M_050219_1,7421,QETPPQVTF True True QETPPQVTF 41.461829 1046.51408690214 6264434.0 7409.0 nc|ENSG00000159753|Q6F5E8-2|CARMIL2;;ENSG00000159753|ENST00000334583|CARMIL2 8.29008944829305 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7423 41.467 26.0 1819700.0 25 0 84973.0 + 43345 WNPRRWWRWCW 11 63 866.4158332245275 0 866.4158203005791 PEAK CID FTMS 0 0 0 7422 1685084.75 0.7940800656343674 1 -0.1048431396484375 1 Unmodified _WNPRRWWRWCW_ ENST00000564348.5_1_19:7982609-7983760:+|nuORF;ENST00000566166.1_1_19:7982552-7983971:+|nuORF 0.0 0.4761840153648598 1 PN{I|L}NADQ 7 10 59.813 0.0 0.0 3.4558 0.0 0.0 245.0861428131037 730.3612154596311 975.4473582727348 0.0 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.0 1.2302046884880935 PN{I|L}NADQ 3.4558 - 463 + 1 2.276 43413.0 1.0 3925 3496 7422 DOHH2_400M_050219_1,7423 DOHH2_400M_050219_1,7423,WNPRRWWRWCW False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7424 41.469 129.0 377090.0 25 0 60684.0 + 23648 LTQTGVNRL 9 80 501.29037773353184 1000.5662025338636 2 501.2898742556572 MULTI CID FTMS 0 0 0 7422 286933.65625 0.1075610025016526 -6 0.5311126708984375 2 Unmodified _LTQTGVNRL_ REV__ENSG00000171219|ENST00000342711|CDC42BPG 10.823927491677226 0.5436922275383211 1 {I|L} 1 -1 11.42 0.0 0.0 1.1414 0.0 0.0 869.4712756313231 0.0 869.4712756313231 0.0 7.925133260145909 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1414 + + 26 + 1 2.276 42754.2 1.0 3926 3496 7422 DOHH2_400M_050219_1,7424 DOHH2_400M_050219_1,7424,LTQTGVNRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7425 41.471 86.0 759950.0 25 0 122670.0 + 38539 TSSKKSGL 8 82 404.2332194444721 806.4518859557443 2 404.2328063845634 MULTI CID FTMS 0 0 0 7422 518367.96875 0.2337355316757932 -1 0.0932464599609375 3 Unmodified _TSSKKSGL_ REV__ENST00000511058.1_1_3:123385915-123401122:-|nuORF 1.844237919475145 0.8131380230371302 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.276 54846.0 1.0 3927 3496 7422 DOHH2_400M_050219_1,7425 DOHH2_400M_050219_1,7425,TSSKKSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7426 41.474 134.0 489510.0 25 0 54044.0 + 1912 AMDVYKNLY 9 99 558.7733647745216 1115.5321766158431 2 558.7737304568291 MULTI CID FTMS 0 0 0 7422 396058.71875 0.4557866541343919 -1 0.0932464599609375 4 Unmodified _AMDVYKNLY_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 68.08070601005525 0.0218408846571049 1 {[DS]|[MA]|[CV]|TT}DV{[HG]|PP}[NP]{I|L}Y 10 3 + 52.668 0.0 0.0 4.7213 4.7213 81.77 0.0 0.0 0.0 17.768024924119665 6.170912423450403 6.170912423450403 8.979400086720375 0 1.7059771852360797 1.6989700043360187 0.0 0.8494850021680094 {[DS]|[MA]|[CV]|TT}DV{[HG]|PP}[NP]{I|L}Y;[DV]YK{[HG]|PP}VD[PS];{[DS]|[MA]|[CV]|TT}D[RH][NP]{I|L}Y;{[DS]|[MA]|[CV]|TT}[KC][MT]R{I|L}Y;[PG][KT][C(Carbamidomethyl (C))R]VD[PS];[DV]YKN{[DS]|[MA]|[CV]|TT}{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[VG][C(Carbamidomethyl (C))R]VD[PS];[YK]VD{[HG]|PP}VD[PS];[DV]YK[RH]D[PS];[YK]NVD{[DS]|[MA]|[CV]|TT}{I|L}Y 4.7213;3.9164;3.4634;3.3719;3.0609;2.8558;2.7311;2.6901;2.6585;2.3824 -;-;-;-;-;-;-;-;-;- 506 + 1 2.276 54604.2 1.0 3928 3496 7422 DOHH2_400M_050219_1,7426 DOHH2_400M_050219_1,7426,AMDVYKNLY True True AMDVYKNLY 41.473904 558.773730456829 4593523.0 7422.0 ENST00000518442.5_1_8:109247181-109261015:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 8.53121566772461 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7427 41.488 800.0 174300.0 25 0 21900.0 + 40632 LVDIVKGTNSYY 12 123 686.3619392749359 1370.7093256166718 2 686.3612548708916 MULTI CID FTMS 0 0 0 7422 151616.640625 0.6782906301467457 -1 0.0932464599609375 5 Unmodified _VLDIFFEVLNY_ ENSG00000143799|ENST00000366794|PARP1 38.61474834105838 0.2337350513322792 1 [{I|L}V]D{I|L}[MD]K[{I|L}V]YY 11 4 + 73.58 0.0 0.0 5.368 5.368 80.646 0.0 0.0 0.0 4.792925790452358 40.141617082477005 4.792925790452358 4.7184874961635614 0 2.1549471895720984 1.6989700043360187 1.055462187404089 0.3807196863200844 [{I|L}V]D{I|L}[MD]K[{I|L}V]YY;[{I|L}V]D{I|L}{[WT]|[RM]}S[{I|L}V]YY;{NN|[MP]|[D{I|L}]|[EV]}MKVVE[{I|L}V]YY;[{I|L}V]D{I|L}{[WT]|[RM]}[{I|L}V]SYY;{NN|[MP]|[D{I|L}]|[EV]}V{I|L}[MD]K[{I|L}V]YY;[{I|L}V]D{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR]YY;[{I|L}V]D{I|L}V{[YC]|[HE]}{I|L}[RD]Y;[{I|L}V]D{I|L}[MD]KY[{I|L}V]Y;{NN|[MP]|[D{I|L}]|[EV]}V{I|L}{[WT]|[RM]}S[{I|L}V]YY;[{I|L}V]D{I|L}[MD]KYY[{I|L}V] 5.368;5.0238;4.5784;4.4557;4.4444;4.4426;4.2085;4.1029;4.1002;4.0447 -;-;-;-;-;-;-;-;-;- 1989 1 2.276 102171.8 0.7099999785423279 3929 3496 7422 DOHH2_400M_050219_1,7427 DOHH2_400M_050219_1,7427,VLDIFFEVLNY False False LVDIVKGTNSYY 41.487742 686.361254870892 1392355.5 7422.0 ENSG00000143799|ENST00000366794|PARP1 6.818835417429606 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7428 41.492 216.0 250420.0 25 0 14384.0 + 5492 DLSKDIQHW 9 90 571.2853112342619 0 571.2855102419853 PEAK CID FTMS 0 0 0 7422 157758.1875 0.9967332420827444 1 -0.1048431396484375 6 Unmodified _DLSKDIQHW_ ENSG00000171848|ENST00000304567|RRM2;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 38.17557092003332 0.0706864996250298 1 SK 2 7 10.005 0.0 0.0 0.87721 0.0 0.0 228.11138066989253 694.2940436254806 922.4054242953732 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + SK 0.87721 + + 132 + 1 2.276 46105.9 1.0 3930 3496 7422 DOHH2_400M_050219_1,7428 DOHH2_400M_050219_1,7428,DLSKDIQHW True True DLSKDIQHW 41.491837 571.285510241985 709295.25 7422.0 ENSG00000171848|ENST00000304567|RRM2;;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;;nc|ENSG00000171848|P31350-2|RRM2 6.32339350382487 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7429 41.506 800.0 151090.0 25 0 10270.0 + + -1 NSELEQQLGATGAY 14 148 740.8506292115137 1479.686705489827 2 740.8500244021416 MULTI CID FTMS 0 0 0 7422 149169.390625 1.0 0 0.0 7 Oxidation (M) _RM(Oxidation (M))SFYQIDYNK_ ENSG00000140743|ENST00000268383|CDR2 33.4449034751529 0.3133739643825231 1 [NS]E{I|L}EQQ{I|L}G 9 -1 101.36 0.0 0.0 6.8498 0.0 0.0 0.0 478.19785761875056 478.19785761875056 53.272120707423646 0.0 0.0 0.0 0 1.1382104921644451 0.8860566476931632 2.209508345908981 1.91747776356288 [NS]E{I|L}EQQ{I|L}G 6.8498 - 17454 1 2.276 88463.1 0.699999988079071 3931 3496 7422 DOHH2_400M_050219_1,7429 DOHH2_400M_050219_1,7429,RMSFYQIDYNK False False NSELEQQLGATGAY 41.505687 740.850024402142 1056371.125 7422.0 ENSG00000140743|ENST00000268383|CDR2 7.713815053304036 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7430 41.52 800.0 184750.0 25 0 6440.3 + -1 HSRFDWFPWLW 11 142 809.8847489091168 1617.7549448850334 2 810.3870727419853 MULTI CID FTMS 0 0 0 7422 144072.28125 0.7092668109821509 -1 0.0932464599609375 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))HSRFDWFPWLW_ REV__ENST00000530353.1_1_8:145980334-145980610:-|nuORF 5.296884461304476 0.8501568894076437 1 {NN|[MP]|[D{I|L}]|[EV]}N{I|L}NADQ{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}KQ 14 -1 + 94.395 0.0 0.0 5.8349 5.8349 79.287 0.0 0.0 0.0 3.2122406592823864 3.2122406592823864 3.2122406592823864 2.068843885969088 0 2.672167511924052 0.0 0.6549471895720984 1.274227503252014 {NN|[MP]|[D{I|L}]|[EV]}N{I|L}NADQ{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}KQ;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}NAD[RH]Y{M(Oxidation (M))|F}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}N[RH]DAY{M(Oxidation (M))|F}{I|L}K;[NP]M{I|L}N[RH]DAY{M(Oxidation (M))|F}{I|L}K;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}NWQ{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}KQ;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}NAD{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;[NP]M{I|L}NW{[RE]|[WV]}NG{M(Oxidation (M))|F}{I|L}K;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}NW[RH]Y{M(Oxidation (M))|F}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}N[RH]WY{M(Oxidation (M))|F}{I|L}Q;[NP]M{I|L}N[RH]WY{M(Oxidation (M))|F}{I|L}Q 5.8349;5.7071;5.6364;5.6312;5.4228;5.4146;5.3602;5.2965;5.2258;5.2206 -;-;-;-;-;-;-;-;-;- 31975 + 1 2.276 104319.8 0.6800000071525574 3932 3496 7422 DOHH2_400M_050219_1,7430 DOHH2_400M_050219_1,7430,HSRFDWFPWLW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7431 41.526 355.0 299170.0 25 0 34994.0 + 7868 ELLQKGYGL 9 127 510.7904240194067 1019.5662951056134 2 510.7905761599541 MULTI CID FTMS 0 0 0 7422 139138.6875 1.0 0 0.0 9 Unmodified _ELLQKGYGL_ ENSG00000058262|ENST00000243253|SEC61A1;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;nc|ENSG00000065665|Q9H9S3-3|SEC61A2 32.78568957990786 0.1150597335874693 1 {[QN]|[E{I|L}]|[KN]}{I|L}QKQVY 8 4 + 54.97 0.0 0.0 5.3916 5.3916 79.443 0.0 0.0 0.0 25.62235206668652 3.3638825092813107 3.3638825092813107 3.3638825092813107 0 0.3807196863200844 2.0 0.0 0.5 {[QN]|[E{I|L}]|[KN]}{I|L}QKQVY;{[QN]|[E{I|L}]|[KN]}{I|L}QK[YG]G{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}QK[YN]{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KQQVY;{[QN]|[E{I|L}]|[KN]}{I|L}[AG]KQVY;{[QN]|[E{I|L}]|[KN]}{I|L}QK[AG]VY;{[QN]|[E{I|L}]|[KN]}{I|L}QA[RK]Y;{[QN]|[E{I|L}]|[KN]}{I|L}KQ[YG]G{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}QA[KG]VY;{[QN]|[E{I|L}]|[KN]}{I|L}[AG]K[YG]G{I|L} 5.3916;5.0616;4.8942;4.6283;4.4831;4.4831;4.3157;4.2984;4.2655;4.1585 -;+;-;-;-;-;-;-;-;- + 603 + 1 2.276 83729.0 1.0 3933 3496 7422 DOHH2_400M_050219_1,7431 DOHH2_400M_050219_1,7431,ELLQKGYGL True True ELLQKGYGL 41.525931 510.790576159954 568864.75 7422.0 ENSG00000065665|ENST00000298428|SEC61A2;;nc|ENSG00000065665|Q9H9S3-3|SEC61A2;;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;;nc|ENSG00000058262|P61619-3|SEC61A1;;ENSG00000058262|ENST00000243253|SEC61A1 5.133312225341797 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7432 41.532 307.0 251400.0 25 0 23526.0 + 45604 YVIPHPVHAF 10 115 393.8816572204869 0 393.8813964724541 PEAK CID FTMS 0 0 0 7422 107734.0390625 1.0 0 0.0 10 Unmodified _YVIPHPVHAF_ ENSG00000157450|ENST00000348370|RNF111;nc|ENSG00000157450|Q6ZNA4-3|RNF111;nc|ENSG00000157450|Q6ZNA4-4|RNF111;nc|ENSG00000157450|Q6ZNA4|RNF111 15.248480904072842 0.3349989633518451 1 H 1 9 6.9897 0.0 0.0 0.88956 0.0 0.0 79.39567051683805 566.2739640792804 645.6696345961185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 0.88956 + + 42 + 1 2.276 66220.8 1.0 3934 3496 7422 DOHH2_400M_050219_1,7432 DOHH2_400M_050219_1,7432,YVIPHPVHAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7433 41.542 507.0 234430.0 25 0 35131.0 + + 24044 SEGPLRPVL 9 137 484.30591040168383 966.5972678701676 2 484.3060790896416 MULTI CID FTMS 0 0 0 7422 90910.34375 1.0 0 0.0 11 Unmodified _LWARLPVL_ nc|ENSG00000112200|Q9Y4E5-4|ZNF451;nc|ENSG00000112200|Q9Y4E5-2|ZNF451;ENST00000444273.6_1_6:56954967-57015704:+|nuORF;ENSG00000112200|ENST00000370706|ZNF451 13.50788311687929 0.7113601687236069 1 {I|L} 1 -1 18.852 0.0 0.0 1.9503 0.0 0.0 835.502325708838 0.0 835.502325708838 0.0 2.593312820726002 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.9503 + + 168 + 1 2.276 92580.9 1.0 3935 3496 7422 DOHH2_400M_050219_1,7433 DOHH2_400M_050219_1,7433,LWARLPVL False False SEGPLRPVL 41.541623 484.306079089642 414956.75 7422.0 nc|ENSG00000112200|Q9Y4E5-4|ZNF451;;nc|ENSG00000112200|Q9Y4E5-2|ZNF451;;ENST00000444273.6_1_6:56954967-57015704:+|nuORF;;ENSG00000112200|ENST00000370706|ZNF451 3.556374311447144 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7434 41.544 112.0 503710.0 25 0 91243.0 + 29065 DIQEKIQAL 9 83 529.2976960841668 1056.5808392351337 2 529.2983276247978 MULTI CID FTMS 0 0 0 7422 286884.21875 0.7849186070690337 -1 0.0932464599609375 12 Unmodified _QEKIQAVLE_ ENSG00000078674|ENST00000325083|PCM1;ENST00000518762.1_1_8:17817875-17822118:+|nuORF;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1;nc|ENSG00000078674|Q15154-2|PCM1 47.74868867922204 0.0453060283459952 1 {[TV]|[{I|L}S]}GQ{I|L}QA{I|L}D{I|L} 10 7 + 52.391 0.0 0.0 4.9585 4.9585 77.088 0.0 0.0 0.0 0.1537984612371374 -2.115903785781086 -2.115903785781086 2.966651902615311 0 0.3182503180159344 0.0 1.2931576817365436 1.3703715150305282 {[TV]|[{I|L}S]}GQ{I|L}QA{I|L}D{I|L};{[TV]|[{I|L}S]}GQ{I|L}AGA{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}QE[{I|L}V]{I|L}D{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}QA{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}QE[K{I|L}]QA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}AGA{I|L}D{I|L};{[TV]|[{I|L}S]}G{I|L}QQA{I|L}D{I|L};{[TV]|[{I|L}S]}GQ{I|L}AQ{I|L}D{I|L};{[TV]|[{I|L}S]}G{I|L}QAGA{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]E[{I|L}V]{I|L}D{I|L} 4.9585;4.6777;4.5049;4.4702;4.22;4.1853;4.1304;3.9383;3.8497;3.6334 -;-;-;-;-;-;-;-;-;- 888 1 2.276 47950.8 1.0 3936 3496 7422 DOHH2_400M_050219_1,7434 DOHH2_400M_050219_1,7434,QEKIQAVLE True False DIQEKIQAL 41.543993 529.298327624798 2009265.25 7422.0 ENSG00000078674|ENST00000325083|PCM1;;ENST00000518762.1_1_8:17817875-17822118:+|nuORF;;nc|ENSG00000078674|Q15154-4|PCM1;;nc|ENSG00000078674|Q15154-5|PCM1;;nc|ENSG00000078674|Q15154-2|PCM1 5.683594862620036 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7435 41.558 800.0 258650.0 25 0 13303.0 -1 0 158 873.9150509860758 1745.8155490389515 2 874.4130737185478 MULTI CID FTMS 0 0 0 7422 172337.875 0.0297324939674675 -6 0.5311126708984375 13 1 [NP]{I|L}NMHRAED{I|L}NP[EP] 15 -1 + 97.723 0.0 0.0 5.5976 5.5976 81.502 0.0 0.0 0.0 5.384096214218914 7.61760834195475 5.384096214218914 4.643783536941726 0 0.6069758080123702 1.0969100130080565 1.079689690656103 1.305462187404089 [NP]{I|L}NMHRAED{I|L}NP[EP];[NP]MN{I|L}HRAED{I|L}NP[EP];[MN]PN{I|L}HRAED{I|L}NP[EP];[NP]{I|L}NMHRAED{I|L}GGP[EP];[NP]{I|L}GGMHRAED{I|L}NP[EP];[NP]{I|L}D[PA]VRAENNNP[EP];[NP]{I|L}NMHRAEN{I|L}DP[EP];{[QV]|[N{I|L}]|[RA]|[KV]}PNMHRAED{I|L}NP[EP];[NP]MGG{I|L}HRAED{I|L}NP[EP];[NP]MN{I|L}HRAED{I|L}GGP[EP] 5.5976;5.3316;5.2892;5.0803;5.0803;5.0251;4.9885;4.8946;4.8143;4.8143 -;-;-;-;-;-;-;-;-;- 36546 1 2.276 137314.9 0.6299999952316284 3937 3496 7422 DOHH2_400M_050219_1,7435 DOHH2_400M_050219_1,7435, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7436 41.567 499.0 152580.0 25 0 6812.8 + 448 AEFKRDLEW 9 114 597.3014411729041 1192.588329412608 2 597.3014404177666 MULTI CID FTMS 0 0 0 7422 107133.4296875 0.821273465419873 -1 0.0932464599609375 14 Unmodified _AEFKRDLEW_ ENSG00000117395|ENST00000236051|EBNA1BP2;ENST00000472982.5_1_1:43637061-43637789:-|nuORF 32.037481411007896 0.1235546156350648 1 AE{M(Oxidation (M))|F}GE[KQ]KAW 10 6 + 69.092 0.0 0.0 5.7934 5.7934 85.151 0.0 0.0 0.0 39.08661594732408 5.846303270046889 5.846303270046889 7.95371572735597 0 1.1237125054200234 1.6989700043360187 0.75 0.0 AE{M(Oxidation (M))|F}GE[KQ]KAW;AE{M(Oxidation (M))|F}G[KS][RV]NW;AE{M(Oxidation (M))|F}W[KQ]KAW;AE{M(Oxidation (M))|F}K[WQ]KAW;AE{M(Oxidation (M))|F}K[SG][RV]NW;AE{M(Oxidation (M))|F}G[KS][RV]HY;AD{M(Oxidation (M))|F}AE[KQ]KAW;AE{M(Oxidation (M))|F}K[SG][RV]HY;AD{M(Oxidation (M))|F}A[KS][RV]NW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q[KQ]EAEDA 5.7934;5.1265;4.973;4.7205;4.6013;4.4367;4.1533;3.9115;3.4864;3.2158 -;-;-;-;-;-;-;-;-;- 595 + 1 2.276 60596.0 1.0 3938 3496 7422 DOHH2_400M_050219_1,7436 DOHH2_400M_050219_1,7436,AEFKRDLEW True True AEFKRDLEW 41.566654 597.301440417767 780046.9375 7422.0 ENSG00000117395|ENST00000236051|EBNA1BP2;;ENST00000472982.5_1_1:43637061-43637789:-|nuORF 6.0889177322387695 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7438 41.572 80.0 753770.0 25 0 64312.0 + 11304 GEVLISRVY 9 86 518.2954786421668 1034.5764043511335 2 518.2956420779228 MULTI CID FTMS 0 0 0 7437 438873.46875 0.2941094759538906 1 -0.128509521484375 1 Unmodified _GEVLISRVY_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 33.4449034751529 0.1114409586740657 1 {[DA]|[EG]}V{I|L}{I|L}SRVY 9 0 + 58.579 0.0 0.0 5.6621 5.6621 92.036 0.0 0.0 0.0 46.36046240493748 4.220902147270067 4.220902147270067 58.57894990110104 0 1.6237125054200234 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}V{I|L}{I|L}SRVY 5.6621 + + 92 + 1 2.285 51521.1 1.0 3939 3497 7437 DOHH2_400M_050219_1,7438 DOHH2_400M_050219_1,7438,GEVLISRVY True True GEVLISRVY 41.57236 518.295642077923 15274747.0 7437.0 ENST00000487958.5_1_3:183894781-183898060:+|nuORF;;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;;ENSG00000161203|ENST00000292807|AP2M1;;nc|ENSG00000161203|Q96CW1-2|AP2M1;;ENST00000466598.5_1_3:183894781-183896942:+|nuORF 5.386274019877116 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7439 41.574 41.0 1371500.0 25 0 265110.0 31431 RPPKLEFA 8 89 479.27752848024926 956.5405040272984 2 479.2775451540947 MULTI CID FTMS 0 0 0 7437 1139895.25 0.5508844743469032 7 -0.6685600280761719 2 Unmodified _RPPKLEFA_ ENSG00000196632|ENST00000354646|WNK3;nc|ENSG00000196632|Q9BYP7-2|WNK3;nc|ENSG00000196632|Q9BYP7-3|WNK3;nc|ENSG00000196632|Q9BYP7-4|WNK3 2.302733041254933 0.8103549651115762 1 {I|L} 1 7 8.4949 0.0 0.0 0.88808 0.0 0.0 825.4460196296408 0.0 825.4460196296408 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.88808 + + 4 + 1 2.285 49309.9 1.0 3940 3497 7437 DOHH2_400M_050219_1,7439 DOHH2_400M_050219_1,7439,RPPKLEFA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7440 41.575 58.0 944500.0 25 0 177990.0 27211 PGKRGRPG 8 73 412.7465659695668 823.4785790059335 2 412.7460510134697 MULTI CID FTMS 0 0 0 7437 1031468.5625 1.0 0 0.0 3 Unmodified _PGKRGRPG_ ENSG00000060718|ENST00000370096|COL11A1;nc|ENSG00000060718|P12107-2|COL11A1;nc|ENSG00000060718|P12107-3|COL11A1;nc|ENSG00000060718|P12107-4|COL11A1 0.6903765706972694 0.8201419426409876 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.285 49600.1 1.0 3941 3497 7437 DOHH2_400M_050219_1,7440 DOHH2_400M_050219_1,7440,PGKRGRPG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7441 41.577 73.0 626580.0 25 0 107430.0 + 45302 YSESSQLLY 9 78 545.2583996978104 1088.5022464624208 2 545.2586547732353 MULTI CID FTMS 0 0 0 7437 689626.25 0.9597124173114968 -1 0.1048431396484375 4 Unmodified _YSESSQLLY_ ENSG00000101868|ENST00000379068|POLA1;nc|ENSG00000101868|P09884|POLA1 26.88365393820708 0.1891292719743517 1 {[{M(Oxidation (M))|F}C]|[YS]}[MT][QA]{I|L}{I|L}Y 9 3 {[{M(Oxidation (M))|F}C]|[YS]}[MT][QA]{I|L} + + 25.969 5.1165 0.64411 2.3858 2.3858 49.288 0.0 0.0 0.0 0.0 14.243014428131849 0.0 0.0 0 0.5 0.0 0.0 0.0 {[{M(Oxidation (M))|F}C]|[YS]}[MT][QA]{I|L}{I|L}Y 2.3858 - 109 + 1 2.285 40056.5 1.0 3942 3497 7437 DOHH2_400M_050219_1,7441 DOHH2_400M_050219_1,7441,YSESSQLLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7442 41.579 114.0 428980.0 25 0 38865.0 + 213 AASKVMVEL 9 75 474.2649187437982 946.5152845543964 2 474.2653381228447 MULTI CID FTMS 0 0 0 7437 414675.84375 1.0 0 0.0 5 Unmodified _AASKVMVEL_ ENSG00000149100|ENST00000531120|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF;nc|ENSG00000149100|Q7L2H7-2|EIF3M 37.97399986684836 0.0865783450051559 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VM[VP]E{I|L} 8 5 + 39.684 0.0 0.0 4.1927 4.1927 79.583 0.0 0.0 0.0 6.989700043360188 12.513487579716768 6.989700043360188 8.226825097560422 0 0.0 0.0 1.2059771852360797 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VM[VP]E{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}T]MVE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}[DV]E{I|L};[KS][Q{I|L}]MVE{I|L};{[ET]|[MV]}{I|L}{I|L}MVE{I|L};AA[R{M(Oxidation (M))|F}]AAVE{I|L};[KS]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}VE{I|L};AA[R{M(Oxidation (M))|F}]VAAE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[NV]|[RG]}NVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KC]{I|L}VE{I|L} 4.1927;3.3235;3.2742;2.8706;2.267;2.0195;1.9522;1.7015;1.5635;1.4509 -;-;-;-;-;-;-;-;-;- 115 + 1 2.285 41896.7 1.0 3943 3497 7437 DOHH2_400M_050219_1,7442 DOHH2_400M_050219_1,7442,AASKVMVEL True True AASKVMVEL 41.579078 474.265338122845 2376215.5 7437.0 nc|ENSG00000149100|Q7L2H7-2|EIF3M;;ENSG00000149100|ENST00000531120|EIF3M;;ENST00000524711.5_1_11:32608681-32615496:+|nuORF 4.052534659703572 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7443 41.581 108.0 482190.0 25 0 82201.0 + 35180 SRSRVGSLL 9 89 487.7910707870828 973.5675886409656 2 487.7914916872978 MULTI CID FTMS 0 0 0 7437 360456.40625 0.4338099225411218 5 -0.5130462646484375 6 Unmodified _SRSRVGSLL_ REV__ENSG00000214944|ENST00000513042|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-2|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-3|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-4|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-5|ARHGEF28;REV__nc|ENSG00000214944|Q8N1W1-6|ARHGEF28 1.6526216038709556 0.8569919814334629 1 {I|L} 1 -1 10.089 0.0 0.0 1.0363 0.0 0.0 842.4728143263156 0.0 842.4728143263156 0.0 10.088643834802156 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0363 + + 6 + 1 2.285 45802.5 1.0 3944 3497 7437 DOHH2_400M_050219_1,7443 DOHH2_400M_050219_1,7443,SRSRVGSLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7444 41.585 188.0 300340.0 25 0 45677.0 9642 FLNLRRML 8 89 531.8166191730912 1061.6186854129824 2 531.8175536990166 MULTI CID FTMS 0 0 0 7437 239199.0 0.6971269350285072 -2 0.198089599609375 7 Unmodified _FLNLRRML_ ENSG00000180096|ENST00000321367|SEPTIN1 8.593279151180031 0.7721714526254883 1 {I|L}K{NN|[MP]|[D{I|L}]|[EV]} 4 6 13.288 0.0 0.0 1.2517 0.0 0.0 574.328905174025 0.0 574.328905174025 0.0 3.373660469422948 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}K{NN|[MP]|[D{I|L}]|[EV]} 1.2517 - 32 1 2.285 50936.6 1.0 3945 3497 7437 DOHH2_400M_050219_1,7444 DOHH2_400M_050219_1,7444,FLNLRRML False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7445 41.591 341.0 219200.0 25 0 77747.0 + 14912 ILLLKGYS 8 92 453.7854640455235 905.556375157847 2 453.7852355837822 MULTI CID FTMS 0 0 0 7437 194726.375 1.0 0 0.0 8 Unmodified _ILLLKGYS_ REV__ENSG00000173409|ENST00000310256|ARV1 0.7936320650641473 0.8195151834710337 1 P 1 -1 8.4097 0.0 0.0 0.92868 0.0 0.0 790.4923701913416 0.0 790.4923701913416 0.0 5.310739533744222 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.92868 - 8 + 1 2.285 63554.1 1.0 3946 3497 7437 DOHH2_400M_050219_1,7445 DOHH2_400M_050219_1,7445,ILLLKGYS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7446 41.597 349.0 261980.0 25 0 29613.0 + 32749 SEDGSLHVF 9 103 495.7301042280864 0 495.7300292849541 PEAK CID FTMS 0 0 0 7437 190008.109375 0.7733742551264225 -1 0.1048431396484375 9 Unmodified _SEDGSLHVF_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49051556-49052718:+|nuORF 42.09456458481378 0.053291022336892 1 VDGT 4 7 19.954 0.0 0.0 2.0166 0.0 0.0 381.15349247624255 233.1044863336547 614.2579788098973 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.0 VDGT 2.0166 - 160 + 1 2.285 75314.3 1.0 3947 3497 7437 DOHH2_400M_050219_1,7446 DOHH2_400M_050219_1,7446,SEDGSLHVF True True SEDGSLHVF 41.597454 495.730029284954 1658708.375 7437.0 ENSG00000178252|ENST00000608424|WDR6;;ENST00000420783.7_1_3:49051556-49052718:+|nuORF 6.751391728719075 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7447 41.606 468.0 383050.0 25 0 32517.0 + 495 AEGPPRLAI 9 155 462.269184677742 922.523816422284 2 462.2693664431572 MULTI CID FTMS 0 0 0 7437 127674.7265625 0.0414449244506993 -2 0.198089599609375 10 Unmodified _AEGPPRLAI_ ENSG00000089693|ENST00000203630|MLF2 60.07390631473393 0.0260411565414776 1 [PG][RP]{I|L}AEA{I|L} 9 4 + 37.405 0.0 0.0 4.0546 4.0546 74.465 0.0 0.0 0.0 3.08615670423054 15.062893943202628 3.08615670423054 3.0546218740408904 0 0.6307196863200843 1.3010299956639813 0.3807196863200844 0.0 [PG][RP]{I|L}AEA{I|L};[PG][RP]{I|L}AE{I|L}A;[PG][RP]{[CP]|[EA]}{I|L}A{I|L};[PG][RP]{[CP]|[EA]}{I|L}{I|L}A;{[CP]|[EA]}[HA][KA]{I|L}A{I|L};{[CP]|[EA]}[HA][KA]{I|L}{I|L}A 4.0546;3.7235;2.4112;2.0801;1.5415;1.2104 -;-;-;-;-;- 288 1 2.285 137314.2 1.0 3948 3497 7437 DOHH2_400M_050219_1,7447 DOHH2_400M_050219_1,7447,AEGPPRLAI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7448 41.62 800.0 153840.0 25 0 6094.0 -1 0 120 859.9162581940855 1717.8179634549708 2 859.9186889529228 MULTI CID FTMS 0 0 0 7437 122094.6875 1.0 0 0.0 11 1 [MN]PN{I|L}NADQR{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q 15 -1 + 119.32 0.0 0.0 6.9458 6.9458 87.634 0.0 0.0 0.0 19.889669551070867 12.83809673312028 12.83809673312028 6.690067809585756 0 2.004432191740108 1.5228787452803376 1.0189301784845295 1.4802046884880935 [MN]PN{I|L}NADQR{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NWQR{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NADQ[WK]{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}NADQR{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NADQ[VG]{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}GGADQR{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NAD[AG]R{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NWQ[VG]{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NW[AG]R{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}NWQR{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q 6.9458;6.5563;6.4625;6.4201;6.4201;6.4201;6.4201;6.0295;6.0295;6.0295 -;-;-;-;-;-;-;-;-;- 3885 + 1 2.285 83771.5 0.6399999856948853 3949 3497 7437 DOHH2_400M_050219_1,7448 DOHH2_400M_050219_1,7448, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7449 41.633 800.0 165730.0 25 0 18626.0 -1 NQVKYLEMK 9 134 584.8055021460236 0 584.8052856326103 PEAK CID FTMS 0 0 0 7437 102996.875 0.5842966054723271 -1 0.1048431396484375 12 Oxidation (M) _NQVKYLEM(Oxidation (M))K_ ENSG00000096872|ENST00000380062|IFT74;nc|ENSG00000096872|Q96LB3-2|IFT74 24.99096001346401 0.1558265925128033 1 KTT 3 -1 34.425 0.0 0.0 2.9483 0.0 0.0 63.99847142107962 770.3851591394825 834.3836305605622 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.1989700043360187 0.0 KTT 2.9483 - 168 + 1 2.285 101250.3 0.5699999928474426 3950 3497 7437 DOHH2_400M_050219_1,7449 DOHH2_400M_050219_1,7449,NQVKYLEMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7450 41.639 290.0 245990.0 25 0 28753.0 43286 WILPTLLY 8 110 509.8028392162623 1017.5911254993248 2 509.8041869997978 MULTI CID FTMS 0 0 0 7437 100937.6328125 0.1137833458741438 -4 0.3764533996582031 13 Unmodified _WILPTLLY_ ENSG00000140285|ENST00000267843|FGF7;nc|ENSG00000140285|P21781-2|FGF7 2.889219685676258 0.8067950007271085 1 Y 1 7 15.485 0.0 0.0 1.5217 0.0 0.0 836.5171031377997 0.0 836.5171031377997 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.5217 + + 103 + 1 2.285 58311.8 1.0 3951 3497 7437 DOHH2_400M_050219_1,7450 DOHH2_400M_050219_1,7450,WILPTLLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7451 41.651 723.0 307970.0 25 0 20379.0 + -1 ITDAYLDQY 9 173 550.3037400874595 549.2964636208594 1 551.2588989138603 MULTI CID FTMS 0 0 0 -1 0 14 ENSG00000174231|ENST00000304992|PRPF8 1 [{I|L}T]DA 4 -1 21.713 0.0 0.0 3.9529 0.0 0.0 0.0 146.077624898719 146.077624898719 1.2937092834840769 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4802046884880938 0.0 [{I|L}T]DA 3.9529 - 289 1 2.285 167503.5 1.0 3952 3497 7437 DOHH2_400M_050219_1,7451 DOHH2_400M_050219_1,7451, False False ITDAYLDQY 41.651274 551.2599 1881256.0 7437.0 ENSG00000174231|ENST00000304992|PRPF8 5.3534361521403 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7452 41.657 235.0 244830.0 25 0 35220.0 + 15322 IPLMPFPP 8 96 456.2566899302252 910.4988269272504 2 456.2567626833916 MULTI CID FTMS 0 0 0 -1 0 15 Unmodified _IPLMPFPP_ REV__ENST00000528175.1_1_8:144803765-144804224:+|nuORF 2.889219685676258 0.8067950007271085 1 E 1 -1 3.9794 0.0 0.0 0.43706 0.0 0.0 344.1983641360378 434.2385860471297 778.4369501831675 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.43706 - 6 + 1 2.285 49792.3 1.0 3953 3497 7437 DOHH2_400M_050219_1,7452 DOHH2_400M_050219_1,7452,IPLMPFPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7453 41.661 227.0 395570.0 25 0 79569.0 + -1 EIRRMVKVP 9 101 572.3364738573899 1142.6583947815798 2 572.3375121951103 MULTI CID FTMS 0 0 0 7437 199616.625 1.0 0 0.0 16 Oxidation (M) _EIRRM(Oxidation (M))VKVP_ REV__ENST00000212015.10_1_10:69644897-69647288:+|nuORF;REV__ENST00000497639.5_1_10:69644980-69647288:+|nuORF 7.289230182591677 0.6602208344931196 1 M 1 -1 15.506 0.0 0.0 1.3571 0.0 0.0 993.6068180987658 0.0 993.6068180987658 0.0 1.5270847890886683 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 M 1.3571 + + 42 + 1 2.285 76462.5 1.0 3954 3497 7437 DOHH2_400M_050219_1,7453 DOHH2_400M_050219_1,7453,EIRRMVKVP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7454 41.675 800.0 81107.0 25 0 3545.3 + 39708 VEGTIGDFKAY 11 118 600.3008368746918 1198.5871208161834 2 600.3018676638603 MULTI CID FTMS 0 0 0 -1 0 17 Unmodified _VEGTIGDFKAY_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 23.78978130925829 0.5336113198261219 1 {NN|[MP]|[D{I|L}]|[EV]}G 3 8 27.192 0.0 0.0 2.2686 0.0 0.0 0.0 910.4316697265928 910.4316697265928 12.212160874208218 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}G 2.2686 + + 167 1 2.285 52060.6 0.5199999809265137 3955 3497 7437 DOHH2_400M_050219_1,7454 DOHH2_400M_050219_1,7454,VEGTIGDFKAY False True VEGTIGDFKAY 41.675249 600.30186766386 10878214.0 7437.0 ENST00000574894.1_1_16:16367711-16371421:+|nuORF;;ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 5.064871311187744 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7455 41.681 335.0 188470.0 25 0 16549.0 -1 0 129 421.2585248989719 840.5024968647439 2 421.2587463259697 MULTI CID FTMS 0 0 0 7437 104159.1953125 1.0 0 0.0 18 1 {I|L} 1 -1 11.99 0.0 0.0 1.4265 0.0 0.0 709.4074173743127 0.0 709.4074173743127 0.0 -7.474250108400469 -7.474250108400469 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4265 - 16 + 1 2.285 53005.4 1.0 3956 3497 7437 DOHH2_400M_050219_1,7455 DOHH2_400M_050219_1,7455, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7456 41.695 800.0 69839.0 25 0 16821.0 40844 VLNQNTLR 8 77 957.5485089733536 956.5412325067535 1 957.5481445193292 MULTI CID FTMS 0 0 0 7437 98430.2734375 0.5466521605192709 7 -0.6685600280761719 19 Unmodified _VLNQNTLR_ ENSG00000151348|ENST00000533608|EXT2;ENST00000529186.1_1_11:44129577-44137613:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 2.302733041254933 0.8103549651115762 1 Q 1 7 10.837 0.0 0.0 1.133 0.0 0.0 810.4717267467912 0.0 810.4717267467912 0.0 3.8477553931086295 0.0 0.0 0 0.0 0.0 0.0 0.0 + Q 1.133 + + 16 + 1 2.285 48032.9 0.4099999964237213 3957 3497 7437 DOHH2_400M_050219_1,7456 DOHH2_400M_050219_1,7456,VLNQNTLR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7458 41.7 53.0 996300.0 25 0 187900.0 34275 SLQRQITTV 9 78 523.3031342597114 1044.5917155862228 2 523.3040038943291 MULTI CID FTMS 0 0 0 7457 820925.5625 0.769269680412557 -1 0.128509521484375 1 Unmodified _SLQRQITTV_ nc|ENSG858|P60608|ERVFC1-1 4.3292370932331545 0.7635526921153418 1 {M(Oxidation (M))|F} 1 9 11.783 0.0 0.0 1.128 0.0 0.0 879.5124747188385 0.0 879.5124747188385 0.0 0.1889428044469987 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.128 - 12 + 1 2.287 45610.1 1.0 3958 3498 7457 DOHH2_400M_050219_1,7458 DOHH2_400M_050219_1,7458,SLQRQITTV False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7459 41.703 99.0 766130.0 25 0 92529.0 + 13329 HLDGQPFLRY 10 59 623.3223582802663 1244.6301636273324 2 623.3228637576103 MULTI CID FTMS 0 0 0 7457 496155.0 0.7395088180954635 1 -0.0772590637207031 2 Unmodified _HLDGQPFLRY_ ENSG00000204516|ENST00000252229|MICB;ENSG00000204520|ENST00000449934|MICA;nc|ENSG00000204516|Q29980-2|MICB 43.77239144664712 0.1177314611616471 1 H{I|L}YHRV 6 7 72.568 0.0 0.0 5.8305 0.0 0.0 0.0 436.1927584283813 436.1927584283813 51.59887825920684 0.0 0.0 0.0 0 1.3807196863200843 1.6989700043360187 0.0 0.7614393726401688 H{I|L}YHRV 5.8305 - 185 + 1 2.287 63883.2 1.0 3959 3498 7457 DOHH2_400M_050219_1,7459 DOHH2_400M_050219_1,7459,HLDGQPFLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7460 41.704 73.0 1122500.0 25 0 164620.0 + 6961 EEIEGFRY 8 81 521.7457914189098 1041.4770299046197 2 521.7460204958916 MULTI CID FTMS 0 0 0 7457 917812.375 0.9787692033910677 -1 0.128509521484375 3 Unmodified _EEIEGFRY_ ENSG00000136271|ENST00000258772|DDX56;ENST00000415758.1_1_7:44608571-44609680:-|nuORF;ENST00000421223.5_1_7:44605603-44609680:-|nuORF;ENST00000446987.5_1_7:44605603-44612175:-|nuORF;nc|ENSG00000136271|Q9NY93-2|DDX56 57.47134341890925 0.1146309765603773 1 EE{I|L}EG{M(Oxidation (M))|F}RY 8 0 + 72.573 0.0 0.0 6.9683 6.9683 85.954 0.0 0.0 0.0 21.90859119031081 4.771212547196626 4.771212547196626 4.771212547196626 0 0.5 1.6989700043360187 0.8494850021680094 0.3494850021680094 + + EE{I|L}EG{M(Oxidation (M))|F}RY;EE{I|L}EG{M(Oxidation (M))|F}YR;EE{I|L}{I|L}GE{I|L}[HC];{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}GE{I|L}[HC];{[QN]|[E{I|L}]|[KN]}[HQ]Y{I|L}[HC];{[QN]|[E{I|L}]|[KN]}G[HA]Y{I|L}[HC];{[QN]|[E{I|L}]|[KN]}G{[QN]|[E{I|L}]|[KN]}E{I|L}[HC];{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}W{I|L}[HC];[AG][H{I|L}]EY{I|L}[HC];[AG][H{I|L}]YE{I|L}[HC] 6.9683;6.5102;4.8647;3.8787;3.7613;3.6362;3.5897;3.2567;2.6964;2.6499 +;-;-;-;-;-;-;-;-;- + 216 + 1 2.287 67637.8 1.0 3960 3498 7457 DOHH2_400M_050219_1,7460 DOHH2_400M_050219_1,7460,EEIEGFRY True True EEIEGFRY 41.704301 521.746020495892 5260049.5 7457.0 nc|ENSG00000136271|Q9NY93-2|DDX56;;ENST00000446987.5_1_7:44605603-44612175:-|nuORF;;ENSG00000136271|ENST00000258772|DDX56;;ENST00000421223.5_1_7:44605603-44609680:-|nuORF;;ENST00000415758.1_1_7:44608571-44609680:-|nuORF 5.746396700541179 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7461 41.706 74.0 910020.0 25 0 74915.0 + 11139 GEILRTEQW 9 84 566.2935218670222 1130.5724908008442 2 566.2938110232353 MULTI CID FTMS 0 0 0 7457 664157.125 0.5043386402290705 -1 0.128509521484375 4 Unmodified _GEILRTEQW_ ENSG00000104960|ENST00000391842|PTOV1;ENST00000596424.1_1_19:50360315-50362048:+|nuORF;nc|ENSG00000104960|Q86YD1-2|PTOV1;nc|ENSG00000104960|Q86YD1-3|PTOV1 53.4695610476455 0.0327627608358129 1 {[DA]|[EG]}{I|L}{I|L}S{I|L}GEQW 10 3 + 63.3 0.0 0.0 5.5989 5.5989 76.297 0.0 0.0 0.0 5.384869186189363 9.164539485499256 5.384869186189363 0.5115252244738144 0 2.048455006504028 1.3979400086720375 0.3252574989159953 0.0 {[DA]|[EG]}{I|L}{I|L}S{I|L}GEQW;{[DA]|[EG]}{I|L}{I|L}S{I|L}WQW;{[DA]|[EG]}{I|L}{I|L}RTEQW;{[DA]|[EG]}{I|L}{I|L}SQ{I|L}WW;{[DA]|[EG]}{I|L}{I|L}S{I|L}GAWW;W{I|L}{I|L}[VP][CS]QW;{[DA]|[EG]}{I|L}{I|L}S{I|L}QWW;{[DA]|[EG]}{I|L}{I|L}RTAWW;{[DA]|[EG]}{I|L}{I|L}S{I|L}GE[AG]W;{[DA]|[EG]}{I|L}{I|L}S{I|L}W[AG]W 5.5989;5.5537;5.4432;5.2446;5.134;5.1226;5.0888;4.9783;4.7883;4.7392 -;-;+;-;-;-;-;-;-;- + 648 1 2.287 55794.6 1.0 3961 3498 7457 DOHH2_400M_050219_1,7461 DOHH2_400M_050219_1,7461,GEILRTEQW True True GEILRTEQW 41.706032 566.293811023235 14135123.0 7457.0 nc|ENSG00000104960|Q86YD1-3|PTOV1;;nc|ENSG00000104960|Q86YD1-2|PTOV1;;ENSG00000104960|ENST00000391842|PTOV1;;ENST00000596424.1_1_19:50360315-50362048:+|nuORF 6.070797125498454 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7462 41.708 97.0 530800.0 25 0 106600.0 + + 42346 KSTPVTVVL 9 77 472.2949044605132 942.5752559878264 2 472.2947875857353 MULTI CID FTMS 0 0 0 7457 486778.125 0.7140034873039767 -1 0.128509521484375 5 Unmodified _VTATVAAVLV_ nc|ENSG00000108883|Q15029-3|EFTUD2;ENST00000586875.1_1_17:42957901-42959090:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;ENSG00000108883|ENST00000426333|EFTUD2 25.399314129420983 0.3980215340001851 1 VTP{[QG]|[NA]}V{I|L} 7 -1 27.981 0.0 0.0 2.9685 0.0 0.0 230.16345055968685 0.0 230.16345055968685 0.0 4.559319556497243 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 VTP{[QG]|[NA]}V{I|L} 2.9685 - 106 + 1 2.287 43347.1 1.0 3962 3498 7457 DOHH2_400M_050219_1,7462 DOHH2_400M_050219_1,7462,VTATVAAVLV False False KSTPVTVVL 41.708136 472.294787585735 4044384.25 7457.0 nc|ENSG00000108883|Q15029-3|EFTUD2;;ENST00000586875.1_1_17:42957901-42959090:-|nuORF;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 5.389973322550456 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7463 41.711 142.0 478310.0 25 0 23304.0 -1 0 71 902.9190298108116 1803.8235066884229 2 902.9181396365166 MULTI CID FTMS 0 0 0 7457 370218.6875 0.1970626203800476 5 -0.4492340087890625 6 1 [MN]PN{I|L}NEEQ 9 -1 73.07 0.0 0.0 4.0508 0.0 0.0 0.0 731.3487642877561 731.3487642877561 41.34356794283349 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 1.274227503252014 [MN]PN{I|L}NEEQ 4.0508 - 204 + 1 2.287 51988.1 1.0 3963 3498 7457 DOHH2_400M_050219_1,7463 DOHH2_400M_050219_1,7463, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7464 41.714 152.0 651340.0 25 0 72933.0 + 43800 YEVEIDGKTY 10 89 608.7902093035067 1215.5658656738133 2 608.7906371951103 MULTI CID FTMS 0 0 0 7457 328358.21875 0.0794748278829734 -2 0.2333526611328125 7 Unmodified _YEVEIDGKTY_ ENSG00000111142|ENST00000323666|METAP2;nc|ENSG00000111142|P50579-2|METAP2;nc|ENSG00000111142|P50579-3|METAP2 59.05245873256422 0.0390717477387156 1 [YE]VE{I|L}DKGTY 10 2 [YE] + + 75.871 23.724 8.1216 6.2416 6.2416 61.172 0.0 0.0 0.0 0.0 21.183239557226173 0.0 0.0 0 1.774227503252014 0.0 1.7786596949921218 0.4247425010840047 [YE]VE{I|L}DKGTY 6.2416 - 1852 + 1 2.287 78691.8 1.0 3964 3498 7457 DOHH2_400M_050219_1,7464 DOHH2_400M_050219_1,7464,YEVEIDGKTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7465 41.717 119.0 419950.0 25 0 27545.0 24160 LYRPALEEM 9 92 561.2866332264434 1120.5587135196868 2 561.2868530154228 MULTI CID FTMS 0 0 0 7457 314195.5 1.0 0 0.0 8 Unmodified _LYRPALEEM_ ENST00000451892.1_1_1:240307909-240308467:-|nuORF 23.1484247019978 0.2366544122328345 1 [{I|L}T]H[KS]Y{I|L}EM 9 6 + 42.153 0.0 0.0 3.7618 3.7618 76.38 0.0 0.0 0.0 11.10357859686072 26.66836936307117 11.10357859686072 6.020599913279618 0 0.6435078169319297 0.8860566476931632 0.8494850021680094 0.0 [{I|L}T]H[KS]Y{I|L}EM;[{I|L}T]HY[KS]{I|L}EM;[HT]{I|L}[KS]Y{I|L}EM;[Y{I|L}][HT][KS]{I|L}EM;[HT]{I|L}Y[KS]{I|L}EM;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}[KS][YV]AY;[{I|L}T]H[KS]HHVY 3.7618;3.2245;2.6714;2.3284;2.1341;1.4553;0.73217 -;-;-;-;-;-;- 169 1 2.287 44306.4 1.0 3965 3498 7457 DOHH2_400M_050219_1,7465 DOHH2_400M_050219_1,7465,LYRPALEEM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7466 41.719 147.0 188780.0 25 0 18133.0 + 30420 RCMVRPLL 8 63 494.2823599080205 986.550166882841 2 494.2824890017509 MULTI CID FTMS 0 0 0 7457 307401.78125 0.354001473174237 -2 0.2333526611328125 9 Unmodified _RCMVRPLL_ REV__ENSG00000122678|ENST00000242248|POLM;REV__ENST00000435068.5_1_7:44112663-44113867:-|nuORF;REV__ENST00000458246.5_1_7:44112663-44113867:-|nuORF 0.7936320650641473 0.8195151834710337 1 C 1 -1 2.4743 0.0 0.0 0.2508 0.0 0.0 493.3433930564723 387.1660555475219 880.5094486039942 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.2508 + + 3 + 1 2.287 29392.8 1.0 3966 3498 7457 DOHH2_400M_050219_1,7466 DOHH2_400M_050219_1,7466,RCMVRPLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7467 41.723 166.0 658990.0 25 0 76824.0 + 30570 RERDWFPDQGY 11 92 490.2251652469637 1467.6536663410911 3 490.2254211306572 MULTI CID FTMS 0 0 0 7457 287884.25 0.4874689785598855 -1 0.128509521484375 10 Unmodified _RERDWFPDQGY_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 25.154963734998336 0.5015564154082124 1 QGY 3 8 38.698 0.0 0.0 2.6367 0.0 0.0 1101.5002684264405 0.0 1101.5002684264405 0.0 20.98976557559532 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3252574989159953 + QGY 2.6367 + + 217 1 2.287 91148.8 1.0 3967 3498 7457 DOHH2_400M_050219_1,7467 DOHH2_400M_050219_1,7467,RERDWFPDQGY False True RERDWFPDQGY 41.72269 490.225421130657 9525033.5 7457.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 9.417168299357096 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7468 41.737 800.0 195030.0 25 0 8084.9 + -1 CQRWRQERERE 11 147 816.893967209698 1631.7733814861958 2 816.8938476443291 MULTI CID FTMS 0 0 0 7457 166814.046875 0.9748758131499264 -1 0.128509521484375 11 Carbamidomethyl (C) _C(Carbamidomethyl (C))QRWRQERERE_ REV__ENST00000556564.5_1_14:89016912-89021018:-|nuORF 1.9063754702782607 0.8661535317806445 1 MPN{I|L}NEAQRDG{M(Oxidation (M))|F}{I|L}Q 14 -1 + 164.57 0.0 0.0 10.086 10.086 92.744 0.0 0.0 0.0 30.39149068412965 13.297669878531508 13.297669878531508 9.050244867691449 0 4.4291746928241125 1.5228787452803376 0.5994850021680094 2.34556125503638 MPN{I|L}NEAQRDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}GGEAQRDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NEA[AG]RDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NEAQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;MPGG{I|L}NEAQRDG{M(Oxidation (M))|F}{I|L}Q;MPGG{I|L}NEAQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}GGEAQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NEA[AG][VG]DG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}GGEA[AG]RDG{M(Oxidation (M))|F}{I|L}Q;MPGG{I|L}GGEAQRDG{M(Oxidation (M))|F}{I|L}Q 10.086;9.5309;9.5309;9.5309;9.5309;8.9775;8.9775;8.9775;8.9775;8.9775 -;-;-;-;-;-;-;-;-;- 186314 + 1 2.287 108138.9 0.7200000286102295 3968 3498 7457 DOHH2_400M_050219_1,7468 DOHH2_400M_050219_1,7468,CQRWRQERERE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7469 41.745 506.0 165660.0 25 0 6971.5 -1 0 115 910.4226577449356 1818.8307625566708 2 910.9151489138604 MULTI CID FTMS 0 0 0 7457 147681.421875 0.0395354765109448 10 -0.918426513671875 12 1 [NP]{I|L}D{[DA]|[EG]}[VP]QDAD{I|L}NP[EP] 17 -1 + 73.525 0.0 0.0 4.0424 4.0424 71.364 0.0 0.0 0.0 13.500810826410271 4.68765315847925 4.68765315847925 1.040048297726571 0 0.0 0.9208187539523752 0.0 1.4559771852360797 [NP]{I|L}D{[DA]|[EG]}[VP]QDAD{I|L}NP[EP];[NP]{I|L}D{[DA]|[EG]}[VP]AGDAD{I|L}NP[EP];[NP]{I|L}D{[DA]|[EG]}[VP]QWD{I|L}NP[EP];[NP]{I|L}D{[DA]|[EG]}[VP]AGWD{I|L}NP[EP];[NP]{I|L}D{[DA]|[EG]}[VP]QDAD{I|L}NV[HS];[NP]{I|L}D{[DA]|[EG]}[VP]AGDAD{I|L}NV[HS];[NP]{I|L}D{[DA]|[EG]}[VP]QDW{I|L}NP[EP];[NP]{I|L}D{[DA]|[EG]}[VP]AGDW{I|L}NP[EP];[NP]{I|L}NQYYGWD{I|L}NP[EP];[NP]{I|L}N[TA]PNQDAD{I|L}NP[EP] 4.0424;3.9853;3.9349;3.8769;3.7847;3.7275;3.6726;3.6146;3.5891;3.5421 -;-;-;-;-;-;-;-;-;- 2200 1 2.287 59875.7 1.0 3969 3498 7457 DOHH2_400M_050219_1,7469 DOHH2_400M_050219_1,7469, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7470 41.751 312.0 369570.0 25 0 24533.0 + + -1 KELPQGTSGQLW 12 125 672.3514748710573 1342.6883968089146 2 672.3515502810478 MULTI CID FTMS 0 0 0 7457 151619.890625 0.6562404285183405 -1 0.128509521484375 13 Carbamidomethyl (C) _KELMKLHC(Carbamidomethyl (C))VW_ ENST00000332359.5_1_X:149283405-149283582:+|nuORF;ENSG00000130935|ENST00000253247|NOL11 27.628801355627647 0.3479284626772844 1 [{I|L}A]VS{[{M(Oxidation (M))|F}H]|[RQ]}WGQ{I|L}W 11 -1 + 70.912 0.0 0.0 5.2814 5.2814 76.116 0.0 0.0 0.0 1.3792580199205131 9.128498242811006 1.3792580199205131 1.3792580199205131 0 1.424742501084005 1.0457574905606752 1.031234684152075 0.4247425010840047 [{I|L}A]VS{[{M(Oxidation (M))|F}H]|[RQ]}WGQ{I|L}W;[AG]E{I|L}VA{[NV]|[RG]}SGQ{I|L}W;[{I|L}A]VS[QP]{[SA]|[TG]}SGQ{I|L}W;[{I|L}A]VQE{[NV]|[RG]}SGQ{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VA{[NV]|[RG]}SGQ{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AV{[NV]|[RG]}SGQ{I|L}W;[AG]E{I|L}AV{[NV]|[RG]}SGQ{I|L}W;[AG]EV{I|L}A{[NV]|[RG]}SGQ{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VA{[WN]|[YH]}GQ{I|L}W;[{I|L}A]{[DA]|[EG]}VA{[NV]|[RG]}SGQ{I|L}W 5.2814;5.1786;5.0962;5.0661;5.015;4.8373;4.7734;4.7734;4.7468;4.7439 -;-;-;-;-;-;-;-;-;- 4243 1 2.287 87857.3 1.0 3970 3498 7457 DOHH2_400M_050219_1,7470 DOHH2_400M_050219_1,7470,KELMKLHCVW False False KELPQGTSGQLW 41.751194 672.351550281048 5977238.5 7457.0 ENST00000332359.5_1_X:149283405-149283582:+|nuORF;;ENSG00000130935|ENST00000253247|NOL11 5.896916230519612 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7471 41.758 353.0 330100.0 25 0 43423.0 + 23348 LTDFIQKY 8 134 514.276218240594 1026.5378835479878 2 514.2762328982353 MULTI CID FTMS 0 0 0 7457 140216.34375 0.5290903263601168 -1 0.128509521484375 14 Unmodified _LTDFIQKY_ ENSG00000065427|ENST00000302445|KARS1;ENST00000565738.1_1_16:75674022-75675473:-|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;nc|ENSG00000065427|Q15046-2|KARS1 88.90359156742426 0.0528693370567628 1 {I|L}TD{M(Oxidation (M))|F}{I|L}QKY 8 0 + 90.946 0.0 0.0 8.8595 8.8595 94.56 0.0 0.0 0.0 71.82646116864922 12.5190243216651 12.5190243216651 9.262137858390815 0 1.174742501084005 2.0 0.0 1.2134679910804405 + + {I|L}TD{M(Oxidation (M))|F}{I|L}QKY;{I|L}TD{M(Oxidation (M))|F}{I|L}[AG]KY;{I|L}T[W{I|L}]{[CT]|[{M(Oxidation (M))|F}G]}KY;{I|L}T[W{I|L}][PS]D[VP];{I|L}T[W{I|L}][HN]M{I|L};{I|L}T[W{I|L}][PS]V[DP];{[QN]|[E{I|L}]|[KN]}S[{I|L}A][{I|L}A]D[VP];[DP][KP]{I|L}{M(Oxidation (M))|F}D[VP];{[QN]|[E{I|L}]|[KN]}S[PS][W{I|L}][VP];[YV][DV]{I|L}QKY 8.8595;7.9572;5.0411;4.4193;3.9577;3.8988;3.1818;2.4149;2.3256;2.1384 +;-;-;-;-;-;-;-;-;- + 639 + 1 2.287 92335.8 1.0 3971 3498 7457 DOHH2_400M_050219_1,7471 DOHH2_400M_050219_1,7471,LTDFIQKY True True LTDFIQKY 41.757573 514.276232898235 1291171.625 7457.0 nc|ENSG00000065427|Q15046-2|KARS1;;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;;ENST00000565738.1_1_16:75674022-75675473:-|nuORF;;ENSG00000065427|ENST00000302445|KARS1 7.050885836283366 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7472 41.773 800.0 259280.0 25 0 48765.0 + 30572 RERDWFPDQGY 11 131 734.8343001818015 1467.654047430403 2 735.3365356326103 MULTI CID FTMS 0 0 0 7457 109219.796875 0.5495852008109252 -1 0.128509521484375 15 Unmodified _RERDWFPDQGY_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 42.46559527809542 0.1744146515247353 1 {[RE]|[WV]}RD[W{M(Oxidation (M))|F}]PDQGY 11 0 + 61.509 0.0 0.0 4.191 4.191 70.927 0.0 0.0 0.0 7.340610492820652 40.08201737346159 7.340610492820652 0.3395701975960676 0 1.860924374808178 0.0 0.0 1.1989700043360187 + + {[RE]|[WV]}RD[W{M(Oxidation (M))|F}]PDQGY;{[RE]|[WV]}RD[WM]{I|L}DQGY;[DP]Q[QA][YQ]RDQGY;[QT]{[NV]|[RG]}N[W{M(Oxidation (M))|F}]PDQGY;[QT]{[NV]|[RG]}N[WM]{I|L}DQGY;{[RE]|[WV]}RD[W{M(Oxidation (M))|F}]PD[AG]GY;{[RE]|[WV]}RD[WM]{I|L}D[AG]GY;[DP]QGAA[YQ]RDQGY;{[RE]|[WV]}RD[C(Carbamidomethyl (C))K]AADQGY;[QT]{[NV]|[RG]}NHHRDQGY 4.191;4.1678;3.661;3.6301;3.607;3.569;3.5458;3.4633;3.024;3 +;-;-;-;-;-;-;-;-;- + 898 1 2.287 146540.5 0.6100000143051147 3972 3498 7457 DOHH2_400M_050219_1,7472 DOHH2_400M_050219_1,7472,RERDWFPDQGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7474 41.777 4.8 12666000.0 25 0 613880.0 -1 RCHRRRRRCCC 11 70 866.9070431313726 1731.799533329545 2 866.9084350466728 MULTI CID FTMS 0 0 0 7473 11610450.0 1.0 0 0.0 1 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 1 [MN]PN{I|L}NADQ[QP]AN{I|L} 14 -1 100.43 0.0 0.0 5.7991 0.0 0.0 0.0 208.07325159244377 208.07325159244377 80.48077908162952 0.0 0.0 0.0 0 1.1549471895720984 1.5228787452803376 0.0 1.174742501084005 [MN]PN{I|L}NADQ[QP]AN{I|L} 5.7991 - 1300 + 1 2.287 45380.2 1.0 3973 3499 7473 DOHH2_400M_050219_1,7474 DOHH2_400M_050219_1,7474,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7475 41.779 52.0 927720.0 25 0 167990.0 + 38540 TSSKKSGL 8 77 404.2332194444721 806.4518859557443 2 404.2328063845634 MULTI CID FTMS 0 0 0 7473 900722.125 0.4061415393522524 2 -0.227935791015625 2 Unmodified _TSSKKSGL_ REV__ENST00000511058.1_1_3:123385915-123401122:-|nuORF 1.844237919475145 0.8131380230371302 1 S 1 -1 10.837 0.0 0.0 1.3438 0.0 0.0 701.4084879838678 0.0 701.4084879838678 0.0 10.837455436468815 0.0 0.0 0 0.0 0.0 0.0 0.0 S 1.3438 + + 4 + 1 2.287 44366.0 1.0 3974 3499 7473 DOHH2_400M_050219_1,7475 DOHH2_400M_050219_1,7475,TSSKKSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7476 41.78 35.0 1279900.0 25 0 309750.0 + 35167 SRSAVLQLQ 9 57 501.29037773353184 1000.5662025338636 2 501.2907592654228 MULTI CID FTMS 0 0 0 7473 1578835.125 0.5918479241830736 -3 0.3106117248535156 3 Unmodified _SRSAVLQLQ_ REV__ENSG00000136895|ENST00000373387|GARNL3;REV__ENST00000481242.5_1_9:130127572-130155530:+|nuORF;REV__ENST00000496711.5_1_9:130126995-130155530:+|nuORF;REV__nc|ENSG00000136895|Q5VVW2-4|GARNL3;REV__nc|ENSG00000136895|Q5VVW2-5|GARNL3 1.6526216038709556 0.8569919814334629 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.287 43738.6 1.0 3975 3499 7473 DOHH2_400M_050219_1,7476 DOHH2_400M_050219_1,7476,SRSAVLQLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7477 41.781 64.0 941530.0 25 0 209300.0 + 42973 VVTPLPAA 8 68 384.2356641568069 766.4567753804138 2 384.2354308962822 MULTI CID FTMS 0 0 0 7473 917353.375 0.1271042845008371 -2 0.2057685852050781 4 Unmodified _VVTPLPAA_ REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF 0.0 0.8243325171867699 1 H 1 -1 0.9691 0.0 0.0 0.12644 0.0 0.0 557.3763901038498 68.99905573062733 626.3754458344771 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.12644 - 2 + 1 2.287 53947.0 1.0 3976 3499 7473 DOHH2_400M_050219_1,7477 DOHH2_400M_050219_1,7477,VVTPLPAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7478 41.785 212.0 280000.0 25 0 25328.0 + 38425 TRNDYVMMY 9 81 596.759627082008 1191.504701230816 2 596.7595092654228 MULTI CID FTMS 0 0 0 7473 211554.9375 0.1783819394504206 -1 0.0772590637207031 5 Unmodified _TRNDYVMMY_ ENSG00000169180|ENST00000304658|XPO6;nc|ENSG00000169180|Q96QU8-2|XPO6 15.248480904072842 0.4239247793462406 1 YVMMY 5 4 44.949 0.0 0.0 3.7724 0.0 0.0 486.219122432186 0.0 486.219122432186 0.0 32.22811589762955 0.0 0.0 0 1.0 0.0 0.0 0.0 + YVMMY 3.7724 + + 49 1 2.287 53610.3 1.0 3977 3499 7473 DOHH2_400M_050219_1,7478 DOHH2_400M_050219_1,7478,TRNDYVMMY False True TRNDYVMMY 41.785348 596.759509265423 14655908.0 7473.0 nc|ENSG00000169180|Q96QU8-2|XPO6;;ENSG00000169180|ENST00000304658|XPO6 7.704611937204997 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7479 41.789 174.0 265900.0 25 0 17197.0 + 616 AEKLITQTF 9 85 525.7957167597814 1049.576880586363 2 525.7968017458916 MULTI CID FTMS 0 0 0 7473 197251.859375 1.0 0 0.0 6 Unmodified _AEKLITQTF_ ENSG00000090273|ENST00000321265|NUDC 43.77239144664712 0.0547478964384323 1 [AG]TV{I|L}{I|L}TQT{M(Oxidation (M))|F} 10 3 + 54.037 0.0 0.0 5.1485 5.1485 75.029 0.0 0.0 0.0 0.8994172734230617 11.20506544868192 0.8994172734230617 0.8994172734230617 0 0.8935078169319297 1.0457574905606752 1.1643943297944483 0.0 [AG]TV{I|L}{I|L}TQT{M(Oxidation (M))|F};[TA]GV{I|L}{I|L}TQT{M(Oxidation (M))|F};[QT]V{I|L}{I|L}TQT{M(Oxidation (M))|F};{[CP]|[EA]}K{I|L}{I|L}TQT{M(Oxidation (M))|F};[AG]TV{I|L}{I|L}T[AG]T{M(Oxidation (M))|F};[TA]GV{I|L}{I|L}T[AG]T{M(Oxidation (M))|F};[QT]V{I|L}{I|L}T[AG]T{M(Oxidation (M))|F};{[CP]|[EA]}K{I|L}{I|L}T[AG]T{M(Oxidation (M))|F};[AG]TV{I|L}[WR]T{M(Oxidation (M))|F};[TA]GV{I|L}[WR]T{M(Oxidation (M))|F} 5.1485;5.0628;4.9231;4.6947;4.2753;4.1896;4.0458;3.8174;3.0046;2.9189 -;-;-;+;-;-;-;-;-;- + 256 1 2.287 41715.5 1.0 3978 3499 7473 DOHH2_400M_050219_1,7479 DOHH2_400M_050219_1,7479,AEKLITQTF True True AEKLITQTF 41.788742 525.796801745892 747380.875 7473.0 ENSG00000090273|ENST00000321265|NUDC 6.407184600830078 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7480 41.793 241.0 292780.0 25 0 23452.0 + 33128 SETRTIYQF 9 94 572.7854688777093 0 572.7858764529228 PEAK CID FTMS 0 0 0 7473 146484.84375 1.0 0 0.0 7 Unmodified _SETRTIYQF_ ENSG00000134242|ENST00000359785|PTPN22;ENST00000484147.5_1_1:114375712-114414257:-|nuORF;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;nc|ENSG00000134242|Q9Y2R2|PTPN22 47.594388314883695 0.0382481814706656 1 QY{I|L}T 4 8 27.722 0.0 0.0 2.4242 0.0 0.0 165.08030540408544 470.2007235162719 635.2810289203574 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.3494850021680094 0.0 QY{I|L}T 2.4242 - 58 + 1 2.287 57804.9 1.0 3979 3499 7473 DOHH2_400M_050219_1,7480 DOHH2_400M_050219_1,7480,SETRTIYQF True True SETRTIYQF 41.79325 572.785876452923 2426832.25 7473.0 ENSG00000134242|ENST00000359785|PTPN22;;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;;nc|ENSG00000134242|Q9Y2R2|PTPN22;;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;;ENST00000484147.5_1_1:114375712-114414257:-|nuORF 7.584151903788249 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7481 41.807 800.0 167330.0 25 0 10930.0 -1 0 133 771.7010920767525 2312.081446830457 3 772.0367919802666 MULTI CID FTMS 0 0 0 7473 144686.859375 0.2412788513199783 -1 0.0772590637207031 8 1 TGYGMP 6 -1 44.073 0.0 0.0 1.9062 0.0 0.0 1177.4962351127938 525.3165377252561 1702.81277283805 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3054621874040891 0.0 TGYGMP 1.9062 - 1464 + 1 2.287 98626.9 0.699999988079071 3980 3499 7473 DOHH2_400M_050219_1,7481 DOHH2_400M_050219_1,7481, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7482 41.816 511.0 222460.0 25 0 13052.0 + 16684 KENTIEHLL 9 143 548.8037123776327 1095.5928718220653 2 548.8033325076103 MULTI CID FTMS 0 0 0 7473 122279.921875 0.894568688269832 -1 0.0772590637207031 9 Unmodified _KENTIEHLL_ ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 45.69961567697781 0.0497987121815769 1 H{I|L}{I|L} 3 6 36.753 0.0 0.0 3.3546 0.0 0.0 714.355190551075 0.0 714.355190551075 0.0 19.13303128443836 0.0 0.0 0 1.055462187404089 0.0 0.0 0.0 + H{I|L}{I|L} 3.3546 + + 674 1 2.287 88237.9 1.0 3981 3499 7473 DOHH2_400M_050219_1,7482 DOHH2_400M_050219_1,7482,KENTIEHLL True True KENTIEHLL 41.816094 548.80333250761 900901.0625 7473.0 ENSG00000137713|ENST00000527614|PPP2R1B;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B 4.19981034596761 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7483 41.83 800.0 123760.0 25 0 9113.5 -1 CRCRRCRCRRH 11 134 578.2720563087096 1731.7943395263287 3 578.6081420779228 MULTI CID FTMS 0 0 0 7473 122981.3125 1.0 0 0.0 10 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))RC(Carbamidomethyl (C))RRC(Carbamidomethyl (C))RC(Carbamidomethyl (C))RRH_ ENST00000569981.2_1_16:29820228-29821657:-|nuORF 0.0 0.8751479354844584 1 {I|L}Q 2 -1 25.718 0.0 0.0 1.4851 0.0 0.0 1472.6412423834431 0.0 1472.6412423834431 0.0 6.241100136832763 0.0 0.0 0 0.0 0.0 0.0 0.7134679910804405 {I|L}Q 1.4851 - 637 + 1 2.287 77457.3 0.6399999856948853 3982 3499 7473 DOHH2_400M_050219_1,7483 DOHH2_400M_050219_1,7483,CRCRRCRCRRH False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7484 41.844 800.0 233330.0 25 0 57084.0 + 37149 THPMAHHC 8 142 467.1927156236352 932.3708783140704 2 467.1924621462822 MULTI CID FTMS 0 0 0 7473 108561.84375 1.0 0 0.0 11 Unmodified _THPMAHHC_ REV__ENSG00000166398|ENST00000299505|GARRE1 2.889219685676258 0.8067950007271085 1 {I|L} 1 -1 10.969 0.0 0.0 1.1765 0.0 0.0 801.275768306061 0.0 801.275768306061 0.0 0.5904965603899726 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1765 - 30 + 1 2.287 146212.0 0.5 3983 3499 7473 DOHH2_400M_050219_1,7484 DOHH2_400M_050219_1,7484,THPMAHHC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7485 41.858 800.0 137050.0 25 0 13313.0 -1 EYFHLDMMKLR 11 107 757.861707560313 1513.708862187426 2 757.8611328005791 MULTI CID FTMS 0 0 0 7473 91137.4375 0.561263154734492 -1 0.0772590637207031 12 2 Oxidation (M) _EYFHLDM(Oxidation (M))M(Oxidation (M))KLR_ ENSG00000205268|ENST00000401827|PDE7A;ENST00000518667.1_1_8:66643803-66660021:-|nuORF;nc|ENSG00000205268|Q13946-2|PDE7A;nc|ENSG00000205268|Q13946-3|PDE7A 5.296884461304476 0.8501568894076437 1 EVE{I|L}DKGTY 9 -1 68.208 0.0 0.0 4.506 0.0 0.0 461.2076317421668 0.0 461.2076317421668 0.0 34.780581838266976 0.0 0.0 0 0.0 0.0 2.261922997584469 0.3807196863200844 EVE{I|L}DKGTY 4.506 - 2249 + 1 2.287 82961.4 0.6000000238418579 3984 3499 7473 DOHH2_400M_050219_1,7485 DOHH2_400M_050219_1,7485,EYFHLDMMKLR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7486 41.86 42.0 1188400.0 25 0 214280.0 19386 LERPGWVV 8 71 478.26960138687537 954.5246498405508 2 478.2697631716728 MULTI CID FTMS 0 0 0 7473 890634.75 0.642655921276639 -1 0.0772590637207031 13 Unmodified _LERPGWVV_ ENST00000382214.7_1_20:388725-389346:+|nuORF 2.577480529830294 0.808687252328423 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.287 42704.4 1.0 3985 3499 7473 DOHH2_400M_050219_1,7486 DOHH2_400M_050219_1,7486,LERPGWVV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7487 41.862 91.0 699480.0 25 0 91288.0 43287 WILRSVIQD 9 90 377.2169414190535 0 377.2168456912041 PEAK CID FTMS 0 0 0 7473 268106.9375 0.1517605695091131 -3 0.3106117248535156 14 Unmodified _WILRSVIQD_ ENST00000378278.6_1_10:14976506-14977537:-|nuORF 1.1933415558491238 0.3444685223463735 1 Y 1 9 1.7827 0.0 0.0 0.23693 0.0 0.0 510.3032848383038 76.02498041324452 586.3282652515484 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.23693 - 2 + 1 2.287 55195.8 1.0 3986 3499 7473 DOHH2_400M_050219_1,7487 DOHH2_400M_050219_1,7487,WILRSVIQD False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7488 41.876 800.0 138650.0 25 0 8797.4 + 1913 AMDVYKNLY 9 155 558.7733647745216 1115.5321766158431 2 558.7736083865166 MULTI CID FTMS 0 0 0 7473 134890.40625 0.1552326562423804 2 -0.227935791015625 15 Unmodified _AMDVYKNLY_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 14.838274106304384 0.4350285940865338 1 VYEDR{I|L}Y 7 6 19.602 0.0 0.0 1.7571 0.0 0.0 159.07399898088062 0.0 159.07399898088062 0.0 3.11828878921396 0.0 0.0 0 0.218765315847925 0.0 0.0 0.25 VYEDR{I|L}Y 1.7571 - 1012 + 1 2.287 86613.6 0.5899999737739563 3987 3499 7473 DOHH2_400M_050219_1,7488 DOHH2_400M_050219_1,7488,AMDVYKNLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7489 41.89 800.0 40129.0 25 0 1269.4 -1 0 70 959.4482923211845 0 959.4477416872978 PEAK CID FTMS 0 0 0 7473 98336.953125 0.6595248137950186 1 -0.1322135925292968 16 1 AW 2 -1 6.1979 0.0 0.0 0.32333 0.0 0.0 701.3119155976436 955.4269503229124 1656.738865920556 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AW 0.32333 - 8 + 1 2.287 29658.0 0.449999988079071 3988 3499 7473 DOHH2_400M_050219_1,7489 DOHH2_400M_050219_1,7489, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7490 41.905 800.0 87170.0 25 0 7659.7 -1 0 81 886.3749267458916 0 886.3749267458916 PEAK CID FTMS 0 0 0 -1 0 17 1 W 1 -1 3.9794 0.0 0.0 0.22473 0.0 0.0 722.2380604236206 859.4105211044719 1581.6485815280926 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.22473 - 8 + 1 2.287 53856.3 0.449999988079071 3989 3499 7473 DOHH2_400M_050219_1,7490 DOHH2_400M_050219_1,7490, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7492 41.91 37.0 1249900.0 25 0 142000.0 + 496 AEGPPRLAI 9 77 462.269184677742 922.523816422284 2 462.2691528201103 MULTI CID FTMS 0 0 0 7491 1508902.5 0.4898099396779072 1 -0.0957221984863281 1 Unmodified _AEGPPRLAI_ ENSG00000089693|ENST00000203630|MLF2 39.957323273325 0.0756908302845263 1 {[CP]|[EA]}GPP[R{I|L}]A{I|L} 9 0 + 30.34 0.0 0.0 3.2888 3.2888 83.298 0.0 0.0 0.0 14.476212463643424 1.2595562582525623 1.2595562582525623 30.339862491657858 0 0.9247425010840048 0.0 0.0 0.0 + + {[CP]|[EA]}GPP[R{I|L}]A{I|L} 3.2888 + + 41 + 1 2.269 41178.7 1.0 3990 3500 7491 DOHH2_400M_050219_1,7492 DOHH2_400M_050219_1,7492,AEGPPRLAI True True AEGPPRLAI 41.909704 462.26915282011 32777734.0 7491.0 ENSG00000089693|ENST00000203630|MLF2 4.741730531056722 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7493 41.911 34.0 2182600.0 25 0 232020.0 + + 8570 TEIGIRSGW 9 81 509.8028392162623 1017.5911254993248 2 509.8040649294853 MULTI CID FTMS 0 0 0 7491 816491.9375 0.9204018554763184 -1 0.1322135925292968 2 Unmodified _ETLVMLKKG_ ENSG00000189233|ENST00000413272|NUGGC 7.910154910731844 0.6385446671287552 1 {I|L}G{I|L}[{I|L}V] 5 -1 22.218 0.0 0.0 2.1834 0.0 0.0 504.2447987287125 0.0 504.2447987287125 0.0 5.479465618955501 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}G{I|L}[{I|L}V] 2.1834 - 70 1 2.269 62429.2 1.0 3991 3500 7491 DOHH2_400M_050219_1,7493 DOHH2_400M_050219_1,7493,ETLVMLKKG False False TEIGIRSGW 41.910883 509.804064929485 180757860.0 7491.0 ENSG00000189233|ENST00000413272|NUGGC 2.3464733759562173 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7494 41.912 20.0 3193300.0 25 0 344400.0 + 21200 LPDERTISL 9 75 522.2901959060661 1042.565838878932 2 522.2906371951103 MULTI CID FTMS 0 0 0 7491 2715222.5 0.7280710533755026 -1 0.1322135925292968 3 Unmodified _LPDERTISL_ ENSG00000101138|ENST00000217109|CSTF1 38.17557092003332 0.0854718145212029 1 {I|L}PD[VP][R{M(Oxidation (M))|F}]S 8 5 47.841 0.0 0.0 4.5888 0.0 0.0 0.0 128.07222925357658 128.07222925357658 24.13934099835714 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.6237125054200234 0.0 {I|L}PD[VP][R{M(Oxidation (M))|F}]S 4.5888 - 135 + 1 2.269 56234.3 1.0 3992 3500 7491 DOHH2_400M_050219_1,7494 DOHH2_400M_050219_1,7494,LPDERTISL True True LPDERTISL 41.912062 522.29063719511 19853880.0 7491.0 ENSG00000101138|ENST00000217109|CSTF1 1.2882967789967854 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7495 41.913 26.0 2197700.0 25 0 522460.0 27493 PKGVVTAL 8 64 392.74855732633193 0 392.7485839724541 PEAK CID FTMS 0 0 0 7491 2678042.5 1.0 0 0.0 4 Unmodified _PKGVVTAL_ MER52D_dup518|chr14:71230781-71232935:+|1.82709249221962|0.0272404342012767|6.07|46.0|51|1|anti-sense 0.6903765706972694 0.5983587967854751 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.269 49719.0 1.0 3993 3500 7491 DOHH2_400M_050219_1,7495 DOHH2_400M_050219_1,7495,PKGVVTAL False False False False ERV PXD020620_cell_line DOHH2_400M_050219_1 7496 41.914 20.0 2496900.0 25 0 261130.0 + 36812 TEIGIRSGW 9 74 509.76960168874473 1017.5246504442896 2 509.7699157595634 MULTI CID FTMS 0 0 0 7491 1478019.5 0.125289367574234 -2 0.20947265625 5 Unmodified _TEIGIRSGW_ ENSG00000189233|ENST00000413272|NUGGC 16.149105407346934 0.3995459350917656 1 {I|L}G{I|L}[DP] 5 6 27.218 0.0 0.0 2.675 0.0 0.0 504.2445240705094 0.0 504.2445240705094 0.0 18.99166239860314 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}G{I|L}[DP] 2.675 - 23 1 2.269 45458.5 1.0 3994 3500 7491 DOHH2_400M_050219_1,7496 DOHH2_400M_050219_1,7496,TEIGIRSGW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7497 41.916 36.0 1871300.0 25 0 87514.0 -1 0 75 873.9150509860758 1745.8155490389515 2 873.9150268435478 MULTI CID FTMS 0 0 0 7491 1406410.125 0.236007561618439 -2 0.20947265625 6 1 [MN]PN{I|L}NEAQ 9 -1 65.13 0.0 0.0 3.7306 0.0 0.0 0.0 731.3494087655979 731.3494087655979 33.21909582730501 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.805462187404089 [MN]PN{I|L}NEAQ 3.7306 - 310 + 1 2.269 48512.0 1.0 3995 3500 7491 DOHH2_400M_050219_1,7497 DOHH2_400M_050219_1,7497, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7498 41.917 43.0 1068200.0 25 0 95233.0 + 42405 VTEEFQPVY 9 78 556.2690522719203 1110.5235516106404 2 556.2693359255791 MULTI CID FTMS 0 0 0 7491 1358157.125 0.3742785791708443 -1 0.1322135925292968 7 Unmodified _VTEEFQPVY_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 77.98433622928108 0.0180125044636492 1 EETV{M(Oxidation (M))|F}Q 6 7 44.983 0.0 0.0 4.0506 0.0 0.0 0.0 374.1734937650444 374.1734937650444 8.283409326844264 0.0 0.0 0.0 0 0.5 1.3010299956639813 1.110924374808178 0.0 EETV{M(Oxidation (M))|F}Q 4.0506 - 298 1 2.269 46031.0 1.0 3996 3500 7491 DOHH2_400M_050219_1,7498 DOHH2_400M_050219_1,7498,VTEEFQPVY True True VTEEFQPVY 41.916828 556.269335925579 39883832.0 7491.0 nc|ENSG00000150093|P05556-2|ITGB1;;nc|ENSG00000150093|P05556-4|ITGB1;;nc|ENSG00000150093|P05556-5|ITGB1;;ENSG00000150093|ENST00000302278|ITGB1;;nc|ENSG00000150093|P05556-3|ITGB1 7.321183840433757 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7499 41.92 160.0 467480.0 25 0 182170.0 + 43000 VVVPQIVL 8 63 433.7880848836744 865.5616168341488 2 433.7877990603447 MULTI CID FTMS 0 0 0 7491 508649.40625 0.9610790517493444 -1 0.1322135925292968 8 Unmodified _VVVPQIVL_ REV__ENST00000521506.1_1_5:171681851-171682091:-|nuORF 0.0 0.8243325171867699 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.269 64405.2 1.0 3997 3500 7491 DOHH2_400M_050219_1,7499 DOHH2_400M_050219_1,7499,VVVPQIVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7500 41.922 107.0 797620.0 25 0 98838.0 9274 FHVLNSKK 8 94 486.78329193387634 971.5520309345528 2 486.7831298708916 MULTI CID FTMS 0 0 0 7491 443949.6875 1.0 0 0.0 9 Unmodified _FHVLNSKK_ CCDC168|p.N6414Kfs*2|1|0.14|ENSG00000175820|chr13:102731455-102731456|-/T|frameshift_variant;ENSG00000175820|ENST00000322527|CCDC168 2.577480529830294 0.808687252328423 1 {I|L} 1 7 9.5329 0.0 0.0 0.9812 0.0 0.0 840.4567378210746 0.0 840.4567378210746 0.0 7.058641465788353 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.9812 + + 8 + 1 2.269 67661.5 1.0 3998 3500 7491 DOHH2_400M_050219_1,7500 DOHH2_400M_050219_1,7500,FHVLNSKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7501 41.925 146.0 559220.0 25 0 87684.0 + 5523 DMDKVLLKY 9 98 562.8038793404423 1123.5932057476846 2 562.8044921755791 MULTI CID FTMS 0 0 0 7491 414064.78125 0.9497168891632024 -1 0.1322135925292968 10 Unmodified _DMDKVLLKY_ ENSG00000068305|ENST00000557942|MEF2A;ENSG00000081189|ENST00000504921|MEF2C;ENSG00000116604|ENST00000348159|MEF2D;ENST00000558983.5_1_15:100173318-100211695:+|nuORF;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078|MEF2A;nc|ENSG00000081189|Q06413-2|MEF2C;nc|ENSG00000081189|Q06413-3|MEF2C;nc|ENSG00000081189|Q06413-4|MEF2C;nc|ENSG00000081189|Q06413-5|MEF2C;nc|ENSG00000081189|Q06413-6|MEF2C;nc|ENSG00000116604|Q14814-2|MEF2D;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D;nc|ENSG00000116604|Q14814-6|MEF2D 67.83816525789305 0.0219346420158844 1 [MD]DKV{I|L}{I|L} 7 2 72.497 0.0 0.0 6.4523 0.0 0.0 0.0 306.14014868409043 306.14014868409043 54.75009480581832 0.0 0.0 0.0 0 2.055462187404089 2.0 0.6237125054200234 0.0 + [MD]DKV{I|L}{I|L} 6.4523 + + 294 1 2.269 65169.8 1.0 3999 3500 7491 DOHH2_400M_050219_1,7501 DOHH2_400M_050219_1,7501,DMDKVLLKY True True DMDKVLLKY 41.925172 562.804492175579 2574032.0 7491.0 ENST00000558983.5_1_15:100173318-100211695:+|nuORF;;nc|ENSG00000116604|Q14814-4|MEF2D;;ENSG00000116604|ENST00000348159|MEF2D;;nc|ENSG00000068305|Q02078|MEF2A;;nc|ENSG00000068305|Q02078-6|MEF2A;;nc|ENSG00000081189|Q06413-2|MEF2C;;nc|ENSG00000081189|Q06413-3|MEF2C;;nc|ENSG00000068305|Q02078-4|MEF2A;;nc|ENSG00000068305|Q02078-5|MEF2A;;ENSG00000068305|ENST00000557942|MEF2A;;nc|ENSG00000081189|Q06413-5|MEF2C;;nc|ENSG00000068305|Q02078-3|MEF2A;;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;;nc|ENSG00000116604|Q14814-6|MEF2D;;nc|ENSG00000116604|Q14814-2|MEF2D;;ENSG00000081189|ENST00000504921|MEF2C;;nc|ENSG00000081189|Q06413-6|MEF2C;;nc|ENSG00000081189|Q06413-4|MEF2C;;nc|ENSG00000116604|Q14814-3|MEF2D;;nc|ENSG00000116604|Q14814-5|MEF2D 7.136261781056722 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7502 41.93 257.0 283240.0 25 0 43213.0 40547 VIYRIQALS 9 96 531.8166191730912 1061.6186854129824 2 531.8173705935478 MULTI CID FTMS 0 0 0 7491 283204.5 0.8253775520436157 1 -0.0957221984863281 11 Unmodified _VIYRIQALS_ ENSG00000184500|ENST00000394236|PROS1 6.723162845929126 0.6799819581413107 1 {I|L}{I|L} 2 7 10.969 0.0 0.0 1.0332 0.0 0.0 136.05674801239485 696.3698214166624 832.4265694290573 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 1.0332 - 50 + 1 2.269 60385.2 1.0 4000 3500 7491 DOHH2_400M_050219_1,7502 DOHH2_400M_050219_1,7502,VIYRIQALS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7503 41.935 254.0 302220.0 25 0 39519.0 8705 EVKVHSGR 8 107 456.2566899302252 910.4988269272504 2 456.2565185427666 MULTI CID FTMS 0 0 0 7491 240047.640625 0.4692983109957865 -3 0.337982177734375 12 Unmodified _EVKVHSGR_ ENSG00000197081|ENST00000356956|IGF2R 5.230669730166228 0.792582437072536 1 E 1 7 0.48455 0.0 0.0 0.053218 0.0 0.0 455.256988403616 323.1722200983032 778.4292085019191 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.053218 + + 9 + 1 2.269 65667.4 1.0 4001 3500 7491 DOHH2_400M_050219_1,7503 DOHH2_400M_050219_1,7503,EVKVHSGR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7504 41.941 323.0 281250.0 25 0 37932.0 12325 GSKKLVVA 8 127 401.2625849937168 800.5106170542336 2 401.2619506716728 MULTI CID FTMS 0 0 0 7491 221262.546875 1.0 0 0.0 13 Unmodified _GSKKLVVA_ ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1 2.302733041254933 0.8103549651115762 1 P 1 8 9.9148 0.0 0.0 1.2386 0.0 0.0 685.4465891995446 0.0 685.4465891995446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.2386 - 29 + 1 2.269 75693.1 1.0 4002 3500 7491 DOHH2_400M_050219_1,7504 DOHH2_400M_050219_1,7504,GSKKLVVA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7505 41.946 314.0 625980.0 25 0 54649.0 + 6549 EALKKLIL 8 163 464.315583506285 926.61661407937 2 464.3152648806572 MULTI CID FTMS 0 0 0 7491 205449.4375 0.1246211634398598 -2 0.20947265625 14 Unmodified _EALKKLIL_ ENSG00000104738|ENST00000649973|MCM4 78.14939416004806 0.0999748067387998 1 EA{I|L}KK{I|L}{I|L}{I|L} 8 0 + 50.462 0.0 0.0 5.4458 5.4458 88.429 0.0 0.0 0.0 13.25282318580173 14.904630595263413 13.25282318580173 13.95389839176262 0 1.2940228147639203 1.3979400086720375 0.0 0.0 + + EA{I|L}KK{I|L}{I|L}{I|L};[K{I|L}]K{I|L}{I|L}AE{I|L};KK{I|L}{I|L}{I|L}AE{I|L};{I|L}{I|L}KK{I|L}AE{I|L};[K{I|L}]K{I|L}{[CP]|[EA]}{I|L}{I|L};KK{I|L}{I|L}{[CP]|[EA]}{I|L}{I|L};{I|L}{I|L}KK{[CP]|[EA]}{I|L}{I|L};[K{I|L}]K{[CP]|[EA]}{I|L}{I|L}{I|L};KK{I|L}{[CP]|[EA]}{I|L}{I|L}{I|L};[K{I|L}]{I|L}K{I|L}AE{I|L} 5.4458;3.9399;3.8353;3.7632;3.5641;3.4595;3.3873;3.2681;3.1635;3.1134 +;-;-;-;-;-;-;-;-;- + 546 + 1 2.269 152354.5 1.0 4003 3500 7491 DOHH2_400M_050219_1,7505 DOHH2_400M_050219_1,7505,EALKKLIL True True EALKKLIL 41.946239 464.3163 8798904.0 7491.0 ENSG00000104738|ENST00000649973|MCM4 3.086410125096639 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7506 41.96 800.0 224100.0 25 0 13950.0 + 30540 RELQPSEEVTW 11 142 687.3390015858092 1372.6634502384184 2 687.3392211794853 MULTI CID FTMS 0 0 0 7491 205354.21875 1.0 0 0.0 15 Unmodified _RELQPSEEVTW_ chr14:92116229-92121642|12|18.92|0.99|4.25|-|1|NDUFB1,NDUFB1|2;ENSG00000183648|ENST00000605997|NDUFB1;nc|ENSG00000183648|O75438-2|NDUFB1 59.05245873256422 0.0729907235015292 1 {NN|[MP]|[D{I|L}]|[EV]}AAR[PS]EEVTW 12 4 + 68.594 0.0 0.0 4.9971 4.9971 73.884 0.0 0.0 0.0 0.4139268515822607 9.098233696509126 0.4139268515822607 0.4139268515822607 0 1.305462187404089 1.3979400086720375 1.2302046884880935 0.5994850021680094 {NN|[MP]|[D{I|L}]|[EV]}AAR[PS]EEVTW;[AG]{I|L}ER[PS]EEVTW;{[QN]|[E{I|L}]|[KN]}RQ[PS]EEVTW;[Q{I|L}]ER[PS]EEVTW;{[QN]|[E{I|L}]|[KN]}QR[PS]EEVTW;EEPSVKS[DP]VTW;[PS]EEVKS[DP]VTW;{[QN]|[E{I|L}]|[KN]}R[AG][PS]EEVTW;EEPSVTP[QT]VTW;[Q{I|L}]E[VG][PS]EEVTW 4.9971;4.967;4.6691;4.5985;4.492;4.2585;4.0351;4.004;3.942;3.9334 -;-;-;-;-;-;-;-;-;- 2216 1 2.269 129040.4 0.8399999737739563 4004 3500 7491 DOHH2_400M_050219_1,7506 DOHH2_400M_050219_1,7506,RELQPSEEVTW True True RELQPSEEVTW 41.960078 687.339221179485 1451513.75 7491.0 chr14:92116229-92121642|12|18.92|0.99|4.25|-|1|NDUFB1,NDUFB1|2;;ENSG00000183648|ENST00000605997|NDUFB1;;nc|ENSG00000183648|O75438-2|NDUFB1 7.689255555470784 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7507 41.963 168.0 324790.0 25 0 16818.0 + 437 AEEVPAWHL 9 102 526.2639173233721 1050.513281713544 2 526.2648803591728 MULTI CID FTMS 0 0 0 7491 208848.546875 1.0 0 0.0 16 Unmodified _AEEVPAWHL_ REV__ENSG00000104946|ENST00000221543|TBC1D17;REV__nc|ENSG00000104946|Q9HA65-2|TBC1D17;REV__nc|ENSG00000104946|Q9HA65-3|TBC1D17 18.13498045792455 0.3457906370836843 1 {I|L} 1 -1 14.604 0.0 0.0 1.3902 0.0 0.0 919.418019117644 0.0 919.418019117644 0.0 0.9319560784774694 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3902 + + 154 + 1 2.269 45048.0 1.0 4005 3500 7491 DOHH2_400M_050219_1,7507 DOHH2_400M_050219_1,7507,AEEVPAWHL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7508 41.977 800.0 176190.0 25 0 11305.0 + 42200 VSEQELLRY 9 145 568.8011571298472 0 568.8013183474541 PEAK CID FTMS 0 0 0 7491 188325.046875 1.0 0 0.0 17 Unmodified _VSEQELLRY_ ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6 63.22749603027936 0.0135132600804568 1 SEQE{I|L}{I|L}R 7 2 54.857 0.0 0.0 4.8307 0.0 0.0 99.06526727220678 178.05164514713127 277.11691241933806 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.5356668758921828 0.3807196863200844 + SEQE{I|L}{I|L}R 4.8307 + + 556 + 1 2.269 112929.2 0.75 4006 3500 7491 DOHH2_400M_050219_1,7508 DOHH2_400M_050219_1,7508,VSEQELLRY True True VSEQELLRY 41.977206 568.801318347454 986227.375 7491.0 ENSG00000124587|ENST00000304611|PEX6;;nc|ENSG00000124587|Q13608-3|PEX6 5.668689092000325 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7509 41.992 800.0 132160.0 25 0 8842.5 + -1 LFYRMRCERLV 11 125 779.902814699507 1557.7910764658138 2 779.9036132693291 MULTI CID FTMS 0 0 0 7491 171654.890625 1.0 0 0.0 18 Carbamidomethyl (C),Oxidation (M) _LFYRM(Oxidation (M))RC(Carbamidomethyl (C))ERLV_ REV__ENSG00000221947|ENST00000408926|XKR9 5.731851221503515 0.8481046878870278 1 PSQSTN[{I|L}V] 8 -1 58.286 0.0 0.0 3.7416 0.0 0.0 713.3563533498603 0.0 713.3563533498603 0.0 23.328764245245186 0.0 0.0 0 0.6139829889124311 0.0 2.1549471895720984 0.3252574989159953 PSQSTN[{I|L}V] 3.7416 - 575 1 2.269 75690.3 0.7699999809265137 4007 3500 7491 DOHH2_400M_050219_1,7509 DOHH2_400M_050219_1,7509,LFYRMRCERLV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7510 41.997 248.0 201950.0 25 0 29706.0 28738 PVVKVSIA 8 81 406.7645504326741 811.5145479321483 2 406.7643615603447 MULTI CID FTMS 0 0 0 7491 160715.953125 0.8575329233844444 -1 0.1322135925292968 19 Unmodified _PVVKVSIA_ ENSG00000249715|ENST00000624922|FER1L5;ENST00000505256.6_1_2:97312155-97317763:+|nuORF 5.760428011301431 0.7893668129297577 1 A 1 7 12.218 0.0 0.0 1.5056 0.0 0.0 722.4661374480647 0.0 722.4661374480647 0.0 1.7339374311232802 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 1.5056 + + 14 + 1 2.269 46455.9 1.0 4008 3500 7491 DOHH2_400M_050219_1,7510 DOHH2_400M_050219_1,7510,PVVKVSIA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7511 42.001 204.0 251270.0 25 0 24043.0 + 6973 EEIIRGQVF 9 88 545.7987597120834 0 545.7994262576103 PEAK CID FTMS 0 0 0 7491 119403.859375 1.0 0 0.0 20 Unmodified _EEIIRGQVF_ ENSG00000137193|ENST00000373509|PIM1;ENST00000479509.1_1_6:37140348-37141864:+|nuORF;nc|ENSG00000137193|P11309-2|PIM1;PIM1|p.H244Y|1|0.33|ENSG00000137193|chr6:37173118-37173118|C/T|missense_variant 39.957323273325 0.0619271662220897 1 {I|L}{I|L} 2 7 14.464 0.0 0.0 1.3275 0.0 0.0 258.08565985396893 602.3053072565061 860.390967110475 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 1.3275 + + 13 + 1 2.269 43753.3 1.0 4009 3500 7491 DOHH2_400M_050219_1,7511 DOHH2_400M_050219_1,7511,EEIIRGQVF True True EEIIRGQVF 42.000734 545.79942625761 527534.9375 7491.0 ENST00000479509.1_1_6:37140348-37141864:+|nuORF;;nc|ENSG00000137193|P11309-2|PIM1;;ENSG00000137193|ENST00000373509|PIM1;;PIM1|p.H244Y|1|0.33|ENSG00000137193|chr6:37173118-37173118|C/T|missense_variant 4.302090326944987 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7513 42.005 33.0 1237500.0 25 0 151730.0 + 43801 YEVEIDGKTY 10 54 608.7902093035067 1215.5658656738133 2 608.7905761599541 MULTI CID FTMS 0 0 0 7512 1359809.75 0.329124229770293 1 -0.0793418884277343 1 Unmodified _YEVEIDGKTY_ ENSG00000111142|ENST00000323666|METAP2;nc|ENSG00000111142|P50579-2|METAP2;nc|ENSG00000111142|P50579-3|METAP2 40.72490554402381 0.149912226101682 1 [YE]VE{I|L}DGKTY 10 0 + 86.349 0.0 0.0 7.1036 7.1036 95.989 0.0 0.0 0.0 53.34167111982566 19.23393743112328 19.23393743112328 45.91374116863072 0 1.424742501084005 1.6989700043360187 0.75 0.4247425010840047 + + [YE]VE{I|L}DGKTY;{NN|[MP]|[D{I|L}]|[EV]}[KG]T[Y{M(Oxidation (M))|F}]V[C(Carbamidomethyl (C))N];[KG]D{I|L}T[Y{M(Oxidation (M))|F}]V[C(Carbamidomethyl (C))N];[NS]V{I|L}T[Y{M(Oxidation (M))|F}]V[C(Carbamidomethyl (C))N];[KG]DT{I|L}[Y{M(Oxidation (M))|F}]V[C(Carbamidomethyl (C))N];[NS]VT{I|L}[Y{M(Oxidation (M))|F}]V[C(Carbamidomethyl (C))N];[YT][KG][{M(Oxidation (M))|F}V]EV[C(Carbamidomethyl (C))N];[KG][YT][{M(Oxidation (M))|F}V]EV[C(Carbamidomethyl (C))N];{[TV]|[{I|L}S]}{[NV]|[RG]}T[Y{M(Oxidation (M))|F}]V[C(Carbamidomethyl (C))N];{[TV]|[{I|L}S]}[NS]{I|L}[Y{M(Oxidation (M))|F}]V[C(Carbamidomethyl (C))N] 7.1036;3.3265;3.2636;2.9362;2.7646;2.4373;2.0921;2.0921;1.9288;1.4299 +;-;-;-;-;-;-;-;-;- + 325 + 1 2.251 36783.3 1.0 4010 3501 7512 DOHH2_400M_050219_1,7513 DOHH2_400M_050219_1,7513,YEVEIDGKTY False True YEVEIDGKTY 42.005297 608.790576159954 49826828.0 7512.0 ENSG00000111142|ENST00000323666|METAP2;;nc|ENSG00000111142|P50579-2|METAP2;;nc|ENSG00000111142|P50579-3|METAP2 6.353818575541179 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7514 42.007 66.0 315290.0 25 0 34791.0 + 31432 RPPLCRFV 8 45 494.2823599080205 986.550166882841 2 494.2827636599541 MULTI CID FTMS 0 0 0 7512 655701.6875 0.7551009053817355 1 -0.0793418884277343 2 Unmodified _RPPLCRFV_ REV__ENSG00000174130|ENST00000508254|TLR6 0.6903765706972694 0.8201419426409876 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.251 23460.0 1.0 4011 3501 7512 DOHH2_400M_050219_1,7514 DOHH2_400M_050219_1,7514,RPPLCRFV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7515 42.008 28.0 2059400.0 25 0 309770.0 + 9451 FLDASGAKLDY 11 73 600.3008368746918 1198.5871208161834 2 600.3010131716728 MULTI CID FTMS 0 0 0 7512 1985778.875 1.0 0 0.0 3 Unmodified _FLDASGAKLDY_ ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1 31.635753872319068 0.3493854641218054 1 {M(Oxidation (M))|F}{I|L}DASQ[K{I|L}]DY 10 2 + 66.86 0.0 0.0 5.5782 5.5782 77.907 0.0 0.0 0.0 20.93771438793884 16.53212513775344 16.53212513775344 1.7609125905568137 0 1.3494850021680094 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}DASQ[K{I|L}]DY;{M(Oxidation (M))|F}{I|L}DAQS[K{I|L}]DY;{M(Oxidation (M))|F}{I|L}DAS[AG][K{I|L}]DY;{M(Oxidation (M))|F}{I|L}DA[AG]S[K{I|L}]DY;{M(Oxidation (M))|F}{I|L}DAQRRMY;{M(Oxidation (M))|F}{I|L}DA[AG]RRMY;{M(Oxidation (M))|F}{I|L}WQ[K{I|L}]AMY;[KQ]S{[HG]|PP}QSAD{I|L}E;[KA]GS{[HG]|PP}QSAD{I|L}E;[KQ]S{[HG]|PP}SQAD{I|L}E 5.5782;5.4313;4.8136;4.6667;4.5309;3.7627;3.5306;3.5207;3.4891;3.3738 -;-;+;-;-;-;-;-;-;- + 1050 + 1 2.251 45926.0 1.0 4012 3501 7512 DOHH2_400M_050219_1,7515 DOHH2_400M_050219_1,7515,FLDASGAKLDY False True FLDASGAKLDY 42.008051 600.301013171673 10878214.0 7512.0 nc|ENSG00000082153|Q7L1Q6-2|BZW1;;nc|ENSG00000082153|Q7L1Q6-3|BZW1;;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;;nc|ENSG00000082153|Q7L1Q6-4|BZW1;;ENSG00000082153|ENST00000409600|BZW1 6.885621706644694 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7516 42.009 46.0 1345600.0 25 0 158520.0 + 35662 SVDPHGFISY 10 89 561.2666233727552 1120.5186938123104 2 561.2668945193291 MULTI CID FTMS 0 0 0 7512 1091379.125 0.0383640288343847 -3 0.3051948547363281 4 Unmodified _SVDPHGFISY_ ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;nc|ENSG00000105197|Q3ZCQ8-3|TIMM50 69.10491478415734 0.0189654488676922 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}SDVSY 10 6 + 58.88 0.0 0.0 5.2547 5.2547 76.622 0.0 0.0 0.0 1.7609125905568137 8.397251648788533 1.7609125905568137 1.7609125905568137 0 0.9247425010840048 0.0 0.7059771852360797 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}SDVSY;{[HG]|PP}{M(Oxidation (M))|F}P{I|L}SDVSY;{[CT]|[{M(Oxidation (M))|F}G]}HP{I|L}SDVSY;{[HG]|PP}P{M(Oxidation (M))|F}{I|L}SDVSY;[VS][WY]G{M(Oxidation (M))|F}{I|L}SY;{[HG]|PP}{M(Oxidation (M))|F}{I|L}PSDVSY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}DSVSY;{[CT]|[{M(Oxidation (M))|F}G]}H{I|L}PSDVSY;[HM]VDS{I|L}G{I|L}SY;[VS][YT]{I|L}CSVSY 5.2547;5.0976;5.0198;4.8289;4.7919;4.4738;4.4272;4.396;4.3823;4.27 -;-;-;-;-;-;-;-;-;- 1701 1 2.251 52018.5 1.0 4013 3501 7512 DOHH2_400M_050219_1,7516 DOHH2_400M_050219_1,7516,SVDPHGFISY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7517 42.012 149.0 604020.0 25 0 39426.0 9838 FPEILLIVL 9 101 352.89523226514075 1055.6638673956222 3 352.8950683474541 MULTI CID FTMS 0 0 0 7512 407952.625 1.0 0 0.0 5 Unmodified _FPEILLIVL_ ENSG00000101974|ENST00000682941|ATP11C;ENST00000460773.5_1_X:138814597-138879340:-|nuORF;nc|ENSG00000101974|Q8NB49-2|ATP11C;nc|ENSG00000101974|Q8NB49-3|ATP11C;nc|ENSG00000101974|Q8NB49-4|ATP11C;nc|ENSG00000101974|Q8NB49|ATP11C 16.942295170755138 0.3780752226737986 1 M{I|L} 2 8 32.563 0.0 0.0 3.0846 0.0 0.0 0.0 808.517203727195 808.517203727195 -0.2165251409206092 0.0 -0.2165251409206092 0.0 0 0.0 1.6989700043360187 0.0 0.0 M{I|L} 3.0846 - 33 + 1 2.251 82036.5 1.0 4014 3501 7512 DOHH2_400M_050219_1,7517 DOHH2_400M_050219_1,7517,FPEILLIVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7518 42.015 151.0 393910.0 25 0 22800.0 + 29406 QLDVAGRVMQY 11 88 640.326711663116 1278.638870393032 2 640.3268920779228 MULTI CID FTMS 0 0 0 7512 212140.625 1.0 0 0.0 6 Unmodified _QLDVAGRVMQY_ ENSG00000175115|ENST00000320580|PACS1;ENST00000529795.1_1_11:66001292-66002875:+|nuORF;nc|ENSG00000175115|Q6VY07-2|PACS1 67.83816525789305 0.0386695545555003 1 [Q{I|L}]DVA{I|L}[DN][KT]Y 11 5 + 61.712 0.0 0.0 4.8264 4.8264 73.382 0.0 0.0 0.0 48.94793598307949 6.442355143711147 6.442355143711147 0.4808851752921157 0 0.5866968715561641 2.0 0.3807196863200844 0.4247425010840047 [Q{I|L}]DVA{I|L}[DN][KT]Y;[Q{I|L}]DVA{I|L}[NS]VTGY;[Q{I|L}]DV[NS][{I|L}A]VTGY;[Q{I|L}]{[RE]|[WV]}[WQ]VTGY 4.8264;4.7888;2.9488;1.8775 -;-;-;- 286 + 1 2.251 50691.0 1.0 4015 3501 7512 DOHH2_400M_050219_1,7518 DOHH2_400M_050219_1,7518,QLDVAGRVMQY True True QLDVAGRVMQY 42.015286 640.326892077923 1266179.875 7512.0 ENSG00000175115|ENST00000320580|PACS1;;ENST00000529795.1_1_11:66001292-66002875:+|nuORF;;nc|ENSG00000175115|Q6VY07-2|PACS1 8.049867947896322 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7519 42.02 261.0 350800.0 25 0 24961.0 + 5386 DLKRGMLL 8 119 473.28130532023874 944.5480577072776 2 473.2813903689384 MULTI CID FTMS 0 0 0 7512 212692.265625 0.7111814741690486 1 -0.0793418884277343 7 Unmodified _DLKRGMLL_ ENSG00000086504|ENST00000199706|MRPL28 36.12702656103203 0.299085846329477 1 D{I|L}K 3 5 41.727 0.0 0.0 4.4176 0.0 0.0 0.0 585.3225191705686 585.3225191705686 17.201140738196017 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 + D{I|L}K 4.4176 + + 132 + 1 2.251 74128.6 1.0 4016 3501 7512 DOHH2_400M_050219_1,7519 DOHH2_400M_050219_1,7519,DLKRGMLL False True DLKRGMLL 42.020111 473.281390368938 1525389.375 7512.0 ENSG00000086504|ENST00000199706|MRPL28 0.2739704449971517 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7520 42.025 283.0 332570.0 25 0 17565.0 + 12313 GSEYLKLGY 9 145 515.2661667176357 1028.5177805020712 2 515.2669555544853 MULTI CID FTMS 0 0 0 7512 205523.9375 1.0 0 0.0 8 Unmodified _GSEYLKLGY_ ENSG00000100353|ENST00000216190|EIF3D;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 57.47134341890925 0.0274820932774257 1 [SG]EY{I|L}K{I|L}GY 9 0 [SG]E + + 31.121 18.957 6.9416 3.0258 3.0258 50.531 0.0 0.0 0.0 0.0 11.477218472167152 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.0 + + [SG]EY{I|L}K{I|L}GY 3.0258 + + 384 + 1 2.251 77888.9 1.0 4017 3501 7512 DOHH2_400M_050219_1,7520 DOHH2_400M_050219_1,7520,GSEYLKLGY True True GSEYLKLGY 42.025324 515.266955554485 1134162.75 7512.0 nc|ENSG00000100353|O15371-2|EIF3D;;ENSG00000100353|ENST00000216190|EIF3D;;nc|ENSG00000100353|O15371-3|EIF3D;;ENST00000462641.1_1_22:36907036-36908721:-|nuORF 5.37967602411906 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7521 42.032 393.0 208830.0 25 0 14798.0 8312 ERCRVPERLW 10 132 672.3514748710573 1342.6883968089146 2 672.3509399294853 MULTI CID FTMS 0 0 0 7512 167071.890625 0.7231196952139295 2 -0.1440391540527343 9 Unmodified _ERCRVPERLW_ ENST00000609015.5_2_3:193767133-193776214:-|nuORF 26.268140514670165 0.3785003716575977 1 {[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}C(Carbamidomethyl (C))YKW 10 8 + 50.71 0.0 0.0 3.7768 3.7768 76.701 0.0 0.0 0.0 0.0 0.0 0.0 6.347907798992921 0 0.5 0.0 0.3494850021680094 0.9361818737241734 {[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}C(Carbamidomethyl (C))YKW;{[DS]|[MA]|[CV]|TT}[RH]C(Carbamidomethyl (C)){I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}W;{[ET]|[MV]}[HK]C(Carbamidomethyl (C)){I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}KY[CG]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}W;[QP][RN]C(Carbamidomethyl (C)){I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}W;{[ET]|[MV]}QN[KA]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}W;[DP]PY[KA]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TN[KA]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P[KA]Y[YQ];{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P[KA]YS{[CT]|[{M(Oxidation (M))|F}G]} 3.7768;3.304;3.2053;3.0942;3.0052;2.9185;2.8647;2.6549;1.9324;1.7722 -;-;-;-;-;-;-;-;-;- 839 + 1 2.251 65372.0 1.0 4018 3501 7512 DOHH2_400M_050219_1,7521 DOHH2_400M_050219_1,7521,ERCRVPERLW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7522 42.037 242.0 311260.0 25 0 17416.0 + 8307 EQWVKPMAV 9 122 544.282088762452 1086.5496245917038 2 544.2822143435478 MULTI CID FTMS 0 0 0 7512 140980.75 1.0 0 0.0 10 Unmodified _EQWVKPMAV_ ENSG00000197713|ENST00000359429|RPE;ENSG00000235376|ENST00000441178|RPEL1;nc|ENSG00000197713|Q96AT9-2|RPE;nc|ENSG00000197713|Q96AT9-3|RPE;nc|ENSG00000197713|Q96AT9-4|RPE;nc|ENSG00000197713|Q96AT9-5|RPE 46.020951573049366 0.0490941689151868 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVK{[DS]|[MA]|[CV]|TT}PV 9 2 + 40.384 0.0 0.0 3.7167 3.7167 74.477 0.0 0.0 0.0 15.769469451263944 7.912800692342117 7.912800692342117 3.979400086720368 0 0.6109243748081782 0.0 0.3054621874040891 0.3807196863200844 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVK{[DS]|[MA]|[CV]|TT}PV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVK{NN|[MP]|[D{I|L}]|[EV]}AV;{[QN]|[E{I|L}]|[KN]}[NS]VK{NN|[MP]|[D{I|L}]|[EV]}AV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[DA]|[EG]}VK{[DS]|[MA]|[CV]|TT}PV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVK{NN|[MP]|[D{I|L}]|[EV]}G{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVK[RN]Q;{[QN]|[E{I|L}]|[KN]}[NS]VK{NN|[MP]|[D{I|L}]|[EV]}G{I|L};{[QN]|[E{I|L}]|[KN]}[NS]VK[RN]Q;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[DA]|[EG]}VK{NN|[MP]|[D{I|L}]|[EV]}AV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[DA]|[EG]}VK{NN|[MP]|[D{I|L}]|[EV]}G{I|L} 3.7167;3.3505;3.158;2.8692;2.858;2.7173;2.6656;2.5199;2.503;2.0105 -;+;-;-;-;-;-;-;-;- + 351 + 1 2.251 61203.2 1.0 4019 3501 7512 DOHH2_400M_050219_1,7522 DOHH2_400M_050219_1,7522,EQWVKPMAV True True EQWVKPMAV 42.036914 544.282214343548 698843.3125 7512.0 ENSG00000235376|ENST00000441178|RPEL1;;nc|ENSG00000197713|Q96AT9-4|RPE;;ENSG00000197713|ENST00000359429|RPE;;nc|ENSG00000197713|Q96AT9-5|RPE;;nc|ENSG00000197713|Q96AT9-3|RPE;;nc|ENSG00000197713|Q96AT9-2|RPE 7.630647500356038 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7523 42.051 800.0 206010.0 25 0 36076.0 + 11140 GEILRTEQW 9 168 566.2935218670222 1130.5724908008442 2 566.2942382693291 MULTI CID FTMS 0 0 0 7512 126831.171875 0.0963113371133329 2 -0.1440391540527343 11 Unmodified _GEILRTEQW_ ENSG00000104960|ENST00000391842|PTOV1;ENST00000596424.1_1_19:50360315-50362048:+|nuORF;nc|ENSG00000104960|Q86YD1-2|PTOV1;nc|ENSG00000104960|Q86YD1-3|PTOV1 35.079672537005266 0.1024668437275948 1 {[DA]|[EG]}{I|L}{I|L}RTEQW 9 0 + 30.16 0.0 0.0 2.6676 2.6676 71.912 0.0 0.0 0.0 2.5357146845473224 8.518827169673315 2.5357146845473224 3.979400086720375 0 1.8979400086720373 1.154901959985743 0.0 0.0 + + {[DA]|[EG]}{I|L}{I|L}RTEQW;{[DA]|[EG]}{I|L}{I|L}RTAWW;[WQ]KK[NG]GQW;{[DA]|[EG]}{I|L}H[HQ][KP]W;[WQ]KK{NN|[MP]|[D{I|L}]|[EV]}QW;{[DA]|[EG]}{I|L}{I|L}{[VA]|[{I|L}G]}S[KC][DP];{[{M(Oxidation (M))|F}H]|[RQ]}KRTEQW;[WQ]KK{[VA]|[{I|L}G]}W{[DA]|[EG]};{[DS]|[MA]|[CV]|TT}P{I|L}RTEQW;{[{M(Oxidation (M))|F}H]|[RQ]}KRTAWW 2.6676;2.3157;2.1556;2.0268;1.8489;1.6194;0.91695;0.67765;0.61557;0.56497 +;-;-;-;-;-;-;-;-;- + 464 1 2.251 126707.5 0.6499999761581421 4020 3501 7512 DOHH2_400M_050219_1,7523 DOHH2_400M_050219_1,7523,GEILRTEQW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7524 42.052 71.0 892860.0 25 0 83142.0 + 25530 NEQQLEEIY 9 84 583.272101669623 1164.529650406046 2 583.2729369997978 MULTI CID FTMS 0 0 0 7512 819975.75 1.0 0 0.0 12 Unmodified _NEQQLEEIY_ REV__ENSG00000198765|ENST00000369522|SYCP1 7.910154910731844 0.6385446671287552 1 {M(Oxidation (M))|F}{I|L}GK[{I|L}P]{M(Oxidation (M))|F}Y 8 -1 20.699 0.0 0.0 1.7775 0.0 0.0 180.9708553557212 0.0 180.9708553557212 0.0 3.6206379080853424 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}GK[{I|L}P]{M(Oxidation (M))|F}Y 1.7775 - 116 + 1 2.251 48680.1 1.0 4021 3501 7512 DOHH2_400M_050219_1,7524 DOHH2_400M_050219_1,7524,NEQQLEEIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7525 42.066 800.0 269670.0 25 0 21206.0 + 4739 DEFSHQVQEW 10 167 652.780958478096 1303.5473640229918 2 652.7813598513603 MULTI CID FTMS 0 0 0 7512 123740.3828125 0.5165964282277963 -1 0.0957221984863281 13 Unmodified _DEFSHQVQEW_ ENSG00000109111|ENST00000314616|SUPT6H 96.36657018975838 0.0088773658760237 1 [WE]Q[DG]QVQEW 10 4 + 86.515 0.0 0.0 6.6369 6.6369 83.631 0.0 0.0 0.0 3.4242268082220733 9.164539485499262 3.4242268082220733 3.4242268082220733 0 0.6989700043360187 0.0 1.7302046884880935 1.3807196863200843 [WE]Q[DG]QVQEW;[AG]EW[DG]QVQEW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W[DG]QVQEW;[WE]{[WN]|[YH]}QVQEW;[WE]Q[DG]QV[AG]EW;[WE]Q[DG][AG]VQEW;[WE]Q{[WN]|[YH]}VQEW;[WE][AG][DG]QVQEW;[AG]EW[DG]QV[AG]EW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W[DG]QV[AG]EW 6.6369;6.3742;6.3574;5.944;5.9339;5.9339;5.8437;5.7421;5.6739;5.6544 -;-;-;-;-;-;-;-;-;- 6846 1 2.251 160397.1 0.699999988079071 4022 3501 7512 DOHH2_400M_050219_1,7525 DOHH2_400M_050219_1,7525,DEFSHQVQEW True True DEFSHQVQEW 42.066269 652.78135985136 1590527.375 7512.0 ENSG00000109111|ENST00000314616|SUPT6H 6.992403348286946 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7526 42.08 800.0 113430.0 25 0 5667.7 + 30571 RERDWFPDQGY 11 131 490.2251652469637 1467.6536663410911 3 490.5593139529228 MULTI CID FTMS 0 0 0 7512 116941.65625 0.2169041379224799 2 -0.1440391540527343 14 Unmodified _RERDWFPDQGY_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 7.846045518447754 0.8381297814158264 1 QGY 3 8 34.253 0.0 0.0 2.3338 0.0 0.0 1101.5015091742443 0.0 1101.5015091742443 0.0 21.488299613635924 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + QGY 2.3338 + + 158 1 2.251 78340.8 0.5600000023841858 4023 3501 7512 DOHH2_400M_050219_1,7526 DOHH2_400M_050219_1,7526,RERDWFPDQGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7528 42.085 15.0 2778500.0 25 0 701620.0 + 42974 VVTPLPAA 8 51 384.2356641568069 766.4567753804138 2 384.2353698611259 MULTI CID FTMS 0 0 0 7527 3985555.75 0.5522203610380212 1 -0.064697265625 1 Unmodified _VVTPLPAA_ REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF 0.0 0.8243325171867699 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.232 38771.0 1.0 4024 3502 7527 DOHH2_400M_050219_1,7528 DOHH2_400M_050219_1,7528,VVTPLPAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7529 42.086 16.0 2295600.0 25 0 149400.0 -1 RCHRRRRRCCC 11 46 866.9070431313726 1731.799533329545 2 867.4077026247978 MULTI CID FTMS 0 0 0 7527 2635578.5 0.2489216549628333 3 -0.2718582153320312 2 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 1 [NP]{I|L}N 4 -1 27.167 0.0 0.0 1.5687 0.0 0.0 0.0 1290.5505458630014 1290.5505458630014 3.098943791441968 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [NP]{I|L}N 1.5687 - 37 1 2.232 33034.0 1.0 4025 3502 7527 DOHH2_400M_050219_1,7529 DOHH2_400M_050219_1,7529,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7530 42.087 24.0 1946200.0 25 0 433950.0 43406 WQTKPKLT 8 70 501.29037773353184 1000.5662025338636 2 501.2906677126884 MULTI CID FTMS 0 0 0 7527 2667636.5 1.0 0 0.0 3 Unmodified _WQTKPKLT_ ENSG00000087365|ENST00000322535|SF3B2 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.232 42115.4 1.0 4026 3502 7527 DOHH2_400M_050219_1,7530 DOHH2_400M_050219_1,7530,WQTKPKLT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7531 42.089 111.0 533930.0 25 0 42291.0 + 38426 TRNDYVMMY 9 75 596.759627082008 1191.504701230816 2 596.7600585818291 MULTI CID FTMS 0 0 0 7527 409797.25 0.345538747997545 2 -0.1555137634277343 4 Unmodified _TRNDYVMMY_ ENSG00000169180|ENST00000304658|XPO6;nc|ENSG00000169180|Q96QU8-2|XPO6 15.248480904072842 0.4239247793462406 1 YVMMY 5 4 44.949 0.0 0.0 3.7724 0.0 0.0 486.2187672345719 0.0 486.2187672345719 0.0 18.293037728310253 0.0 0.0 0 1.0 0.0 0.0 0.0 + YVMMY 3.7724 + + 126 1 2.232 48819.2 1.0 4027 3502 7527 DOHH2_400M_050219_1,7531 DOHH2_400M_050219_1,7531,TRNDYVMMY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7532 42.092 147.0 466980.0 25 0 62282.0 + 36755 TEALLGPSRI 10 92 528.8054655094699 1055.5963780857396 2 528.8063842654228 MULTI CID FTMS 0 0 0 7527 220385.671875 1.0 0 0.0 5 Unmodified _TEALLGPSRI_ REV__ENST00000217964.11_1_X:9433148-9621615:+|nuORF;REV__ENST00000407597.6_1_X:9431427-9621615:+|nuORF 13.90604991867851 0.6142120002215601 1 {I|L} 1 -1 19.732 0.0 0.0 1.8693 0.0 0.0 924.5012528189412 0.0 924.5012528189412 0.0 2.7371905864353607 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.8693 + + 71 + 1 2.232 60345.8 1.0 4028 3502 7527 DOHH2_400M_050219_1,7532 DOHH2_400M_050219_1,7532,TEALLGPSRI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7533 42.106 800.0 121820.0 25 0 8506.5 + 42165 VSDEWQKWDAR 11 123 710.3382198758794 1418.6618868185587 2 710.3375732302666 MULTI CID FTMS 0 0 0 7527 137521.90625 0.8083167318053928 -1 0.0793418884277343 6 Unmodified _VSDEWQKWDAR_ REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000461872.6_1_6:152697909-152949466:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-10|SYNE1;REV__nc|ENSG00000131018|Q8NF91-12|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-7|SYNE1 7.608950283845883 0.8392484121837455 1 DWS{I|L}{[VA]|[{I|L}G]}SY 8 -1 43.269 0.0 0.0 3.05 0.0 0.0 479.21747304557135 0.0 479.21747304557135 0.0 15.779575239220245 0.0 0.0 0 0.0 0.0 1.416386562212267 0.0 DWS{I|L}{[VA]|[{I|L}G]}SY 3.05 - 565 + 1 2.232 72616.2 0.699999988079071 4029 3502 7527 DOHH2_400M_050219_1,7533 DOHH2_400M_050219_1,7533,VSDEWQKWDAR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7534 42.109 163.0 342010.0 25 0 26404.0 8018 EMTLCFLKYMY 11 88 481.2257627550779 1440.6554588654335 3 481.5598022341728 MULTI CID FTMS 0 0 0 7527 125103.40625 0.6544553600015433 -1 0.0793418884277343 7 Unmodified _EMTLCFLKYMY_ ENST00000395468.8_1_14:55530029-55531448:+|nuORF 5.731851221503515 0.8481046878870278 1 Y 1 10 15.485 0.0 0.0 1.0748 0.0 0.0 1259.5808414111352 0.0 1259.5808414111352 0.0 -5.150312510170778 -5.150312510170778 0.0 0 0.0 0.0 0.0 0.0 + Y 1.0748 + + 79 + 1 2.232 50252.1 1.0 4030 3502 7527 DOHH2_400M_050219_1,7534 DOHH2_400M_050219_1,7534,EMTLCFLKYMY False True EMLQKVTL 42.109179 481.2258 557824.0625 7527.0 ENSG00000105851|ENST00000496166|PIK3CG 0.1824280023574829 2.0 False 8.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7535 42.114 233.0 210930.0 25 0 27163.0 + 6466 EAFREELL 8 86 503.7637387291399 1005.5129245250798 2 503.7635681033134 MULTI CID FTMS 0 0 0 7527 100889.484375 0.3440477415996946 2 -0.1555137634277343 8 Unmodified _EAFREELL_ REV__ENSG00000188613|ENST00000425699|NANOS1 8.593279151180031 0.7721714526254883 1 T{I|L} 2 -1 13.188 0.0 0.0 1.3115 0.0 0.0 773.3700087309377 0.0 773.3700087309377 0.0 8.1259189508755 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L} 1.3115 - 23 + 1 2.232 43933.9 1.0 4031 3502 7527 DOHH2_400M_050219_1,7535 DOHH2_400M_050219_1,7535,EAFREELL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7536 42.117 183.0 307810.0 25 0 52415.0 2103 APSLARRRY 9 91 545.3164559011491 1088.618358869098 2 545.3166992068291 MULTI CID FTMS 0 0 0 7527 259359.453125 0.2350934322967943 -7 0.7111358642578125 9 Unmodified _APSLARRRY_ ENST00000258761.7_2_7:16685784-16705073:+|nuORF;ENST00000415365.5_2_7:16685784-16705069:+|nuORF 1.844237919475145 0.850302753031785 1 Y 1 8 12.218 0.0 0.0 1.1224 0.0 0.0 907.5439245202684 0.0 907.5439245202684 0.0 1.249387366082999 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1224 + + 6 + 1 2.232 48093.8 1.0 4032 3502 7527 DOHH2_400M_050219_1,7536 DOHH2_400M_050219_1,7536,APSLARRRY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7537 42.131 800.0 58383.0 25 0 4326.5 -1 0 71 771.7010920767525 2312.081446830457 3 772.0358764529228 MULTI CID FTMS 0 0 0 7527 171024.65625 0.2851995874790834 2 -0.1555137634277343 10 1 TGYGM 5 -1 32.206 0.0 0.0 1.393 0.0 0.0 1177.4950844497944 622.3699117800143 1799.8649962298086 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 TGYGM 1.393 - 63 + 1 2.232 41119.5 0.7699999809265137 4033 3502 7527 DOHH2_400M_050219_1,7537 DOHH2_400M_050219_1,7537, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7538 42.145 800.0 211150.0 25 0 7454.1 + -1 DSDRDDLKLMAY 12 152 721.3349706229048 1440.6553883126096 2 721.3350097537041 MULTI CID FTMS 0 0 0 7527 136567.140625 0.5983995614989386 -1 0.0793418884277343 11 Carbamidomethyl (C) _FFFVPC(Carbamidomethyl (C))IFMYA_ nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000157212|Q6ZW49-2|PAXIP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF 10.823927491677226 0.8099964156050846 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DN]DD{I|L}K{I|L}MAY 12 -1 + 85.435 0.0 0.0 5.9303 5.9303 85.735 0.0 0.0 0.0 9.181212380090216 57.01819276468952 9.181212380090216 8.010299956639813 0 2.388210492164445 1.3979400086720375 0.5 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DN]DD{I|L}K{I|L}MAY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DN]DD{I|L}K{I|L}AMY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DN]DD{I|L}KM{I|L}AY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DN]DD{I|L}KA{I|L}MY;{[ET]|[MV]}{[QD]|[EN]|[WG]|[KD]|[RS]}DD{I|L}K{I|L}MAY;{[DS]|[MA]|[CV]|TT}{I|L}{M(Oxidation (M))|F}[YG]{M(Oxidation (M))|F}D{I|L}MAY;Y[YG]{I|L}K{I|L}DD[YE]Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{M(Oxidation (M))|F}[YG]{M(Oxidation (M))|F}D{I|L}MAY;DHM{I|L}K{I|L}DD{[QD]|[EN]|[WG]|[KD]|[RS]}[DP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DN]DD{I|L}KAM{I|L}Y 5.9303;5.3742;4.9599;4.8005;4.751;4.7067;4.5354;4.4978;4.4561;4.3826 -;-;-;-;-;-;-;-;-;- 2085 1 2.232 123742.9 0.7099999785423279 4034 3502 7527 DOHH2_400M_050219_1,7538 DOHH2_400M_050219_1,7538,FFFVPCIFMYA False False DSDRDDLKLMAY 42.144767 721.335009753704 1660678.25 7527.0 nc|ENSG00000157212|Q6ZW49-1|PAXIP1;;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;;ENSG00000157212|ENST00000404141|PAXIP1;;nc|ENSG00000157212|Q6ZW49-2|PAXIP1;;ENST00000457196.5_1_7:154735861-154782774:-|nuORF 7.111562252044678 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7540 42.149 47.0 1016300.0 25 0 161190.0 2403 AQPRNIKE 8 77 478.26960138687537 954.5246498405508 2 478.2695495486259 MULTI CID FTMS 0 0 0 7539 933836.625 0.6738291275534019 3 -0.2807960510253906 1 Unmodified _AQPRNIKE_ Tigger2b_Pri_dup1770|chr15:88634948-88635968:-|1.005140273448427|0.0574243708712047|4.13|47.0|18|2|sense 2.577480529830294 0.808687252328423 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.232 42722.3 1.0 4035 3503 7539 DOHH2_400M_050219_1,7540 DOHH2_400M_050219_1,7540,AQPRNIKE False False False False ERV PXD020620_cell_line DOHH2_400M_050219_1 7541 42.163 800.0 74725.0 25 0 3205.2 -1 VEMLLWKMML 10 114 692.3385752984166 1382.662597663633 2 692.3380615115166 MULTI CID FTMS 0 0 0 7539 135106.46875 1.0 0 0.0 2 Acetyl (Protein N-term),3 Oxidation (M) _(Acetyl (Protein N-term))VEM(Oxidation (M))LLWKM(Oxidation (M))M(Oxidation (M))L_ ENST00000480144.5_1_15:59192070-59209171:-|nuORF;ENST00000492526.5_1_15:59204769-59209171:-|nuORF;ENST00000557950.5_1_15:59205840-59209171:-|nuORF 3.5964929083625545 0.7100006075494749 1 SY 2 -1 17.959 0.0 0.0 1.2989 0.0 0.0 1114.55680650328 0.0 1114.55680650328 0.0 8.89075625191822 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 1.2989 - 99 + 1 2.232 47188.9 0.6499999761581421 4036 3503 7539 DOHH2_400M_050219_1,7541 DOHH2_400M_050219_1,7541,VEMLLWKMML False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7542 42.164 57.0 1570900.0 25 0 289640.0 + 5525 DMDRVLLKY 9 87 576.8074519162129 1151.6003508992258 2 576.8076049685478 MULTI CID FTMS 0 0 0 7539 835793.125 0.278530095152735 -1 0.064697265625 3 Unmodified _DMDRVLLKY_ chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;ENSG00000213999|ENST00000424583|MEF2B;nc|ENSG00000213999|Q02080|MEF2B 55.50274090549119 0.0285720310785888 1 V{I|L}{I|L}KY 5 4 48.443 0.0 0.0 4.2066 0.0 0.0 517.1963978498062 0.0 517.1963978498062 0.0 36.22486274231747 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.0 + V{I|L}{I|L}KY 4.2066 + + 201 1 2.232 70985.3 1.0 4037 3503 7539 DOHH2_400M_050219_1,7542 DOHH2_400M_050219_1,7542,DMDRVLLKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7543 42.166 56.0 1316700.0 25 0 85885.0 + 31944 RVDPAKGLFY 10 101 583.321644660212 1164.628736387224 2 583.3217651247978 MULTI CID FTMS 0 0 0 7539 748411.8125 1.0 0 0.0 4 Unmodified _RVDPAKGLFY_ ENSG00000144028|ENST00000323853|SNRNP200 30.7034409873982 0.2788461460996952 1 [RV]DAGK[{I|L}P]{M(Oxidation (M))|F}Y 10 3 [RV]D + + 29.557 0.91515 0.24721 2.5379 2.5379 49.568 0.0 0.0 0.0 0.0 12.959021740953771 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 [RV]DAGK[{I|L}P]{M(Oxidation (M))|F}Y 2.5379 - 297 + 1 2.232 59409.4 1.0 4038 3503 7539 DOHH2_400M_050219_1,7543 DOHH2_400M_050219_1,7543,RVDPAKGLFY False True RVDPAKGLFY 42.165894 583.321765124798 11579095.0 7539.0 ENSG00000144028|ENST00000323853|SNRNP200 6.658710797627767 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7544 42.168 82.0 502720.0 25 0 34560.0 + 29080 QELSGQGWTY 10 74 584.7668245561241 1167.519096179048 2 584.7673217654228 MULTI CID FTMS 0 0 0 7539 457246.0625 0.3802416603127925 -2 0.1440391540527343 5 Unmodified _QELSGQGWTY_ ENSG00000237649|ENST00000428849|KIFC1 30.63653989081413 0.2803493085145199 1 {[WN]|[YH]}WGRDATY 9 7 + 44.587 0.0 0.0 3.819 3.819 71.607 0.0 0.0 0.0 26.62848732905715 16.478174818886373 16.478174818886373 1.706962271689747 0 0.2742275032520141 0.0 0.3494850021680094 0.4247425010840047 {[WN]|[YH]}WGRDATY;{[WN]|[YH]}WGRWTY;{[WN]|[YH]}KDRDATY;{[WN]|[YH]}QDRWTY;{[WN]|[YH]}KD[PS]SATY;{[WN]|[YH]}QG{[QN]|[E{I|L}]|[KN]}SATY;{[WN]|[YH]}KG{[QN]|[E{I|L}]|[KN]}SATY;{[WN]|[YH]}[VS]G[PS]SATY;{[WN]|[YH]}[AG]DRWTY;{[WN]|[YH]}[PA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SATY 3.819;3.6728;3.5611;3.4149;3.2641;3.0063;3.0063;2.737;2.6216;2.5572 -;-;-;-;-;-;-;-;-;- 260 + 1 2.232 35161.2 1.0 4039 3503 7539 DOHH2_400M_050219_1,7544 DOHH2_400M_050219_1,7544,QELSGQGWTY False True QELSGQGWTY 42.167764 584.7685 9152182.0 7539.0 ENSG00000237649|ENST00000428849|KIFC1 6.527704238891602 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7545 42.171 179.0 501200.0 25 0 46667.0 + 344 AEAPGGELMGY 11 107 547.7449308904769 1093.4753088477537 2 547.7449218630791 MULTI CID FTMS 0 0 0 7539 363114.5 0.5929228276888884 -1 0.064697265625 6 Unmodified _AEAPGGELMGY_ ENSG00000173418|ENST00000334982|NAA20;nc|ENSG00000173418|P61599-2|NAA20 26.268140514670165 0.4754186812857754 1 AMKSGY 6 8 36.336 0.0 0.0 3.323 0.0 0.0 438.1727708612287 0.0 438.1727708612287 0.0 10.34047478932317 0.0 0.0 0 0.0 0.0 0.6237125054200234 0.0 AMKSGY 3.323 - 593 + 1 2.232 69731.3 1.0 4040 3503 7539 DOHH2_400M_050219_1,7545 DOHH2_400M_050219_1,7545,AEAPGGELMGY False True AEAPGGELMGY 42.171262 547.744921863079 5079774.5 7539.0 nc|ENSG00000173418|P61599-2|NAA20;;ENSG00000173418|ENST00000334982|NAA20 6.521546999613444 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7546 42.185 800.0 267250.0 25 0 13286.0 24055 LWWQPWWWKL 10 157 764.896796539859 1527.779040146518 2 764.8963500857353 MULTI CID FTMS 0 0 0 7539 179379.546875 0.467010377049251 -1 0.064697265625 7 Unmodified _LWWQPWWWKL_ chr12:54282820-54283827|48|46.79|0.0|22.16|+|1|HNRNPA1,HNRNPA1|1 10.823927491677226 0.6659270209832991 1 {[SA]|[TG]}GGV[WR]PSQSANV{I|L} 15 12 + 117.53 0.0 0.0 7.6929 7.6929 82.515 0.0 0.0 0.0 12.998350952221642 16.69006780958577 12.998350952221642 1.0432352165537253 0 0.8243923658886185 1.0 2.3456450633157058 1.1549471895720984 {[SA]|[TG]}GGV[WR]PSQSANV{I|L};{[SA]|[TG]}NV[WR]PSQSANV{I|L};{[SA]|[TG]}GGV[WR]PS[AG]SANV{I|L};{[SA]|[TG]}GGV[WR]PSQSAGGV{I|L};{[SA]|[TG]}NV[WR]PS[AG]SANV{I|L};{[SA]|[TG]}NV[WR]PSQSAGGV{I|L};{[QS]|[NT]}GV[WR]PSQSANV{I|L};{[SA]|[TG]}GKAA{I|L}DPSQSANV{I|L};{[QG]|[NA]}SV[WR]PSQSANV{I|L};{[SA]|[TG]}GGQ[PS]V[{I|L}T]QSANV{I|L} 7.6929;7.6246;7.1017;7.1017;7.0322;7.0322;6.8421;6.8345;6.7542;6.7126 -;-;-;-;-;-;-;-;-;- 13373 1 2.232 148158.5 0.800000011920929 4041 3503 7539 DOHH2_400M_050219_1,7546 DOHH2_400M_050219_1,7546,LWWQPWWWKL False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 7547 42.199 800.0 142010.0 25 0 32790.0 12804 GVSLLVLALCL 11 140 550.8429709660792 1099.6713889989585 2 550.8439819216728 MULTI CID FTMS 0 0 0 7539 95961.453125 0.4986737695596356 1 -0.0908164978027343 8 Unmodified _GVSLLVLALCL_ ENSG00000049769|ENST00000055335|PPP1R3F;nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F 3.5964929083625545 0.858179447565866 1 Y 1 11 15.485 0.0 0.0 1.4081 0.0 0.0 918.5967105095036 0.0 918.5967105095036 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4081 - 109 + 1 2.232 90188.1 0.5899999737739563 4042 3503 7539 DOHH2_400M_050219_1,7547 DOHH2_400M_050219_1,7547,GVSLLVLALCL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7548 42.207 442.0 291790.0 25 0 60467.0 + 31473 RPWLRPAAL 9 109 540.3276469109619 1078.6407408887237 2 540.8289062380791 MULTI CID FTMS 0 0 0 7539 87545.3984375 0.3718787921507627 -1 0.064697265625 9 Unmodified _RPWLRPAAL_ ENSG00000162073|ENST00000318782|PAQR4;nc|ENSG00000162073|Q8N4S7-2|PAQR4;nc|ENSG00000162073|Q8N4S7-3|PAQR4 38.17557092003332 0.0854718145212029 1 {[QN]|[E{I|L}]|[KN]}K[R{I|L}]WPP 8 7 29.563 0.0 0.0 2.7407 0.0 0.0 0.0 56.02178023403931 56.02178023403931 15.583362792011997 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}K[R{I|L}]WPP 2.7407 - 240 1 2.232 103037.8 1.0 4043 3503 7539 DOHH2_400M_050219_1,7548 DOHH2_400M_050219_1,7548,RPWLRPAAL True True RPWLRPAAL 42.206821 540.3279 3376338.875 7539.0 nc|ENSG00000162073|Q8N4S7-3|PAQR4;;ENSG00000162073|ENST00000318782|PAQR4;;nc|ENSG00000162073|Q8N4S7-2|PAQR4 6.721242745717366 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7549 42.217 557.0 313530.0 25 0 24715.0 + 308 ADVIDNDSW 9 185 517.7248536446456 1033.435154356091 2 517.7255737185478 MULTI CID FTMS 0 0 0 7539 175554.109375 0.9421911755000472 -1 0.064697265625 10 Unmodified _ADVIDNDSW_ ENSG00000128050|ENST00000512576|PAICS;nc|ENSG00000128050|P22234-2|PAICS 15.847184025352805 0.4077185912009129 1 [DN]DSW{I|L}ER 8 7 + 32.046 0.0 0.0 3.1009 3.1009 74.51 0.0 0.0 0.0 5.879186930024389 5.310996543144107 5.310996543144107 5.879186930024389 0 -0.0173553521896171 0.0 0.2887254899964357 0.9947026752325154 [DN]DSW{I|L}ER;{[DA]|[EG]}VGDC(Carbamidomethyl (C)){I|L}ER;{[DA]|[EG]}VDGC(Carbamidomethyl (C)){I|L}ER;[DN]DS{I|L}WER;[DN]SDW{I|L}ER;{[DA]|[EG]}VGDSWER;{[DA]|[EG]}VDGSWER;[DN]D{I|L}C(Carbamidomethyl (C)){I|L}ER;{[DA]|[EG]}VC[DN]{I|L}ER;{[DA]|[EG]}VGD[CG]{I|L}ER 3.1009;2.532;2.3421;2.3245;2.2951;2.0704;1.8804;1.8706;1.7163;1.641 -;-;-;-;-;-;-;-;-;- 595 1 2.232 134240.0 1.0 4044 3503 7539 DOHH2_400M_050219_1,7549 DOHH2_400M_050219_1,7549,ADVIDNDSW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7550 42.224 335.0 414930.0 25 0 28812.0 34516 SNPAAPLPQAL 11 147 360.2016560969916 0 360.2018005251884 PEAK CID FTMS 0 0 0 7539 131972.125 0.8621087870584511 3 -0.2807960510253906 11 Unmodified _SNPAAPLPQAL_ ENST00000526577.5_1_11:44088110-44095068:+|nuORF;ENST00000527603.5_1_11:44088110-44094899:+|nuORF 5.731851221503515 0.47618401536486 1 A 1 10 7.3464 0.0 0.0 1.0226 0.0 0.0 288.1395354832426 356.18915735416255 644.3286928374051 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 + A 1.0226 + + 7 + 1 2.232 117476.9 1.0 4045 3503 7539 DOHH2_400M_050219_1,7550 DOHH2_400M_050219_1,7550,SNPAAPLPQAL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7551 42.236 670.0 177440.0 25 0 14925.0 + + 29208 SEWSPSTKW 9 144 553.8305350476262 1105.6465171620523 2 553.8309814333916 MULTI CID FTMS 0 0 0 7539 112852.1796875 0.2902346159818199 -7 0.682586669921875 12 Unmodified _QGKIKLEKY_ ENSG00000077238|ENST00000395762|IL4R;nc|ENSG00000077238|P24394-2|IL4R;nc|ENSG00000077238|P24394-3|IL4R 4.3292370932331545 0.7635526921153418 1 WSPSTKW 7 -1 14.914 0.0 0.0 1.3489 0.0 0.0 215.2188571052148 0.0 215.2188571052148 0.0 1.8149511042638973 0.0 0.0 0 0.0 0.0 0.0 0.0 WSPSTKW 1.3489 - 249 + 1 2.232 94555.4 1.0 4046 3503 7539 DOHH2_400M_050219_1,7551 DOHH2_400M_050219_1,7551,QGKIKLEKY False False SEWSPSTKW 42.235504 553.830981433392 1613931.625 7539.0 ENSG00000077238|ENST00000395762|IL4R;;nc|ENSG00000077238|P24394-2|IL4R;;nc|ENSG00000077238|P24394-3|IL4R 6.835526943206787 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7553 42.24 17.0 2808700.0 25 0 361920.0 + 36813 TEIGIRSGW 9 56 509.76960168874473 1017.5246504442896 2 509.7697936892509 MULTI CID FTMS 0 0 0 7552 2451812.0 0.207836212506613 2 -0.1899795532226562 1 Unmodified _TEIGIRSGW_ ENSG00000189233|ENST00000413272|NUGGC 11.494710602746466 0.5255349189887087 1 {I|L}G{I|L}[DP] 5 6 27.218 0.0 0.0 2.675 0.0 0.0 504.24559218574376 0.0 504.24559218574376 0.0 20.20685264203461 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}G{I|L}[DP] 2.675 - 13 1 2.218 43380.1 1.0 4047 3504 7552 DOHH2_400M_050219_1,7553 DOHH2_400M_050219_1,7553,TEIGIRSGW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7554 42.241 30.0 1391400.0 25 0 79555.0 -1 0 52 873.9150509860758 1745.8155490389515 2 873.9154540896416 MULTI CID FTMS 0 0 0 7552 1383135.5 0.2321018819051096 2 -0.1899795532226562 2 1 [MN]PN{I|L}NEAQA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}Q 15 -1 + 87.964 0.0 0.0 5.0386 5.0386 77.615 0.0 0.0 0.0 61.47969238078217 13.345282101434664 13.345282101434664 3.0102999566398125 0 1.048455006504028 1.5228787452803376 0.0 1.0189301784845295 [MN]PN{I|L}NEAQA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NEAQG[RD]{M(Oxidation (M))|F}{I|L}Q;[YV]{[HG]|PP}{I|L}NEAQA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}Q;[YV]{[HG]|PP}{I|L}NEAQG[RD]{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}N[QP]AQAEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NM[RH]AEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.0386;4.8661;3.3681;3.1956;2.9562;2.0805 -;-;-;-;-;- 650 + 1 2.218 35808.3 1.0 4048 3504 7552 DOHH2_400M_050219_1,7554 DOHH2_400M_050219_1,7554, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7555 42.243 109.0 541830.0 25 0 77161.0 + 23549 LTLQRGSH 8 83 456.2566899302252 910.4988269272504 2 456.2569152712822 MULTI CID FTMS 0 0 0 7552 465218.34375 0.9095118885471538 1 -0.1163444519042968 3 Unmodified _LTLQRGSH_ REV__ENSG00000036257|ENST00000264414|CUL3;REV__nc|ENSG00000036257|Q13618-2|CUL3;REV__nc|ENSG00000036257|Q13618-3|CUL3 2.302733041254933 0.8103549651115762 1 {M(Oxidation (M))|F} 1 -1 11.783 0.0 0.0 1.2941 0.0 0.0 745.4193876956082 0.0 745.4193876956082 0.0 1.694092782766905 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2941 - 14 + 1 2.218 51250.3 1.0 4049 3504 7552 DOHH2_400M_050219_1,7555 DOHH2_400M_050219_1,7555,LTLQRGSH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7556 42.245 87.0 683700.0 25 0 110930.0 + 42623 VTTIQRQLS 9 86 523.3031342597114 1044.5917155862228 2 523.3035156130791 MULTI CID FTMS 0 0 0 7552 397568.0625 0.3725515081419023 5 -0.5298271179199219 4 Unmodified _VTTIQRQLS_ REV__nc|ENSG858|P60608|ERVFC1-1 7.289230182591677 0.6602208344931196 1 {I|L} 1 -1 10.713 0.0 0.0 1.0256 0.0 0.0 913.49649876669 0.0 913.49649876669 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0256 + + 23 + 1 2.218 51379.0 1.0 4050 3504 7552 DOHH2_400M_050219_1,7556 DOHH2_400M_050219_1,7556,VTTIQRQLS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7557 42.248 96.0 375500.0 25 0 32741.0 + 42406 VTEEFQPVY 9 71 556.2690522719203 1110.5235516106404 2 556.2693969607353 MULTI CID FTMS 0 0 0 7552 368401.21875 0.101523367348647 3 -0.2707672119140625 5 Unmodified _VTEEFQPVY_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 42.09456458481378 0.0639583784996157 1 EETV{M(Oxidation (M))|F}Q 6 7 38.504 0.0 0.0 3.4672 0.0 0.0 0.0 374.16959627742 374.16959627742 15.572520036465852 0.0 0.0 0.0 0 0.5 0.958607314841775 0.805462187404089 0.0 EETV{M(Oxidation (M))|F}Q 3.4672 - 183 1 2.218 36255.5 1.0 4051 3504 7552 DOHH2_400M_050219_1,7557 DOHH2_400M_050219_1,7557,VTEEFQPVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7558 42.25 128.0 638780.0 25 0 56393.0 + 6550 EALKKLIL 8 112 464.315583506285 926.61661407937 2 464.3158141970634 MULTI CID FTMS 0 0 0 7552 363846.625 0.220701454688414 2 -0.1899795532226562 6 Unmodified _EALKKLIL_ ENSG00000104738|ENST00000649973|MCM4 38.15118350030904 0.2652218139009398 1 {I|L} 1 7 13.979 0.0 0.0 1.5086 0.0 0.0 795.5214582949935 0.0 795.5214582949935 0.0 4.3258999534726446 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5086 + + 80 + 1 2.218 66777.8 1.0 4052 3504 7552 DOHH2_400M_050219_1,7558 DOHH2_400M_050219_1,7558,EALKKLIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7559 42.254 185.0 373470.0 25 0 43772.0 + 18131 KTLSIFME 8 95 484.759904040552 967.505255147904 2 484.7597228884697 MULTI CID FTMS 0 0 0 7552 261508.546875 0.4459764465195362 -1 0.0908164978027343 7 Unmodified _KTLSIFME_ ENSG00000169967|ENST00000682094|MAP3K2 26.88365393820708 0.4786498634179528 1 [KT]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}EM 8 3 [KT]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L} + + 26.766 9.3971 1.3631 2.7665 2.7665 50.004 0.0 0.0 0.0 0.0 6.733396940419702 0.0 0.0 0 0.3807196863200844 0.0 0.5 0.0 [KT]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}EM 2.7665 - 185 + 1 2.218 59240.3 1.0 4053 3504 7552 DOHH2_400M_050219_1,7559 DOHH2_400M_050219_1,7559,KTLSIFME False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7560 42.259 309.0 348540.0 25 0 23900.0 + 25570 NEYESRSLW 9 130 592.2727712182913 1182.5309895033824 2 592.2726928591728 MULTI CID FTMS 0 0 0 7552 270160.1875 0.7749069340924591 -1 0.0908164978027343 8 Unmodified _NEYESRSLW_ ENSG00000117859|ENST00000428468|OSBPL9;nc|ENSG00000117859|Q96SU4-2|OSBPL9;nc|ENSG00000117859|Q96SU4-3|OSBPL9;nc|ENSG00000117859|Q96SU4-4|OSBPL9;nc|ENSG00000117859|Q96SU4-5|OSBPL9;nc|ENSG00000117859|Q96SU4-6|OSBPL9;nc|ENSG00000117859|Q96SU4-7|OSBPL9 80.6760300276096 0.0173529540220427 1 NEYES 5 4 69.909 0.0 0.0 5.9118 0.0 0.0 0.0 557.2855318658811 557.2855318658811 42.51075456070612 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 1.1989700043360187 0.0 + NEYES 5.9118 + + 559 + 1 2.218 83410.0 1.0 4054 3504 7552 DOHH2_400M_050219_1,7560 DOHH2_400M_050219_1,7560,NEYESRSLW True True NEYESRSLW 42.259383 592.272692859173 4947622.5 7552.0 nc|ENSG00000117859|Q96SU4-4|OSBPL9;;nc|ENSG00000117859|Q96SU4-2|OSBPL9;;nc|ENSG00000117859|Q96SU4-7|OSBPL9;;ENSG00000117859|ENST00000428468|OSBPL9;;nc|ENSG00000117859|Q96SU4-5|OSBPL9;;nc|ENSG00000117859|Q96SU4-6|OSBPL9;;nc|ENSG00000117859|Q96SU4-3|OSBPL9 6.855405807495117 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7561 42.266 353.0 278030.0 25 0 12473.0 + 7093 EELYTKKLW 9 116 605.3291667429335 1208.6437805526668 2 605.3290893435478 MULTI CID FTMS 0 0 0 7552 230691.328125 1.0 0 0.0 9 Unmodified _EELYTKKLW_ ENSG00000185627|ENST00000532097|PSMD13 82.5293158979368 0.0169039238599547 1 EE{I|L}YTKK{I|L}W 9 0 + 82.362 0.0 0.0 6.8144 6.8144 94.531 0.0 0.0 0.0 44.58699520843611 14.973024840566469 14.973024840566469 25.76010176414654 0 1.7302046884880935 1.3979400086720375 0.4247425010840047 0.0 + + EE{I|L}YTKK{I|L}W;EE{I|L}YTKK[KG]N;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}TKK{I|L}W;[KT]KY{I|L}EE{I|L}W;[KT]K{I|L}YEE{I|L}W;KKTY{I|L}EE{I|L}W;KKT{I|L}YEE{I|L}W;KK{I|L}TYEE{I|L}W;[KT]K{I|L}Y{I|L}EEW;[KT]KY{I|L}{I|L}EEW 6.8144;4.6831;3.3177;3.0668;3.0668;2.8468;2.8468;2.7666;2.613;2.613 +;-;-;-;-;-;-;-;-;- + 509 + 1 2.218 76228.2 1.0 4055 3504 7552 DOHH2_400M_050219_1,7561 DOHH2_400M_050219_1,7561,EELYTKKLW True True EELYTKKLW 42.26576 605.329089343548 1348579.625 7552.0 ENSG00000185627|ENST00000532097|PSMD13 6.692296187082927 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7562 42.273 393.0 536830.0 25 0 23605.0 + 6169 DTDHYFLRY 9 162 410.52440333562856 1228.5513806070858 3 410.5239745974541 MULTI CID FTMS 0 0 0 7552 204165.90625 0.1957161196610415 -2 0.1555137634277343 10 Unmodified _DTDHYFLRY_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 71.70789743142352 0.0204387454931768 1 DTDHY{M(Oxidation (M))|F}{I|L}RY 9 0 + 107.24 0.0 0.0 8.7293 8.7293 85.974 0.0 0.0 0.0 33.46787486224656 2.6626788940477013 2.6626788940477013 2.6626788940477013 0 1.024227503252014 1.6989700043360187 0.8494850021680094 0.9291746928241124 + + DTDHY{M(Oxidation (M))|F}{I|L}RY;DTDHY{M(Oxidation (M))|F}{I|L}YR;DTYDH{M(Oxidation (M))|F}{I|L}RY;DTDYH{M(Oxidation (M))|F}{I|L}RY;DTYDH{M(Oxidation (M))|F}{I|L}YR;DTDHY{M(Oxidation (M))|F}Y{I|L}R;DTDYH{M(Oxidation (M))|F}{I|L}YR;DTDHY{M(Oxidation (M))|F}YR{I|L};DTDHYY{M(Oxidation (M))|F}{I|L}R;DTYDH{M(Oxidation (M))|F}Y{I|L}R 8.7293;8.5126;7.9698;7.9512;7.7531;7.738;7.7344;7.4647;7.1047;6.9785 +;-;-;-;-;-;-;-;-;- + 977 + 1 2.218 164447.1 1.0 4056 3504 7552 DOHH2_400M_050219_1,7562 DOHH2_400M_050219_1,7562,DTDHYFLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7563 42.281 477.0 715840.0 25 0 45717.0 + 6171 DTDHYFLRY 9 136 615.2828031280435 1228.551053322887 2 615.2825805544853 MULTI CID FTMS 0 0 0 7552 195771.40625 0.1392260756682987 -2 0.1555137634277343 11 Unmodified _DTDHYFLRY_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 117.83759599426816 0.0023773468484599 1 DTDHY{M(Oxidation (M))|F}{I|L}RY 9 0 + 115.47 0.0 0.0 9.3992 9.3992 90.986 0.0 0.0 0.0 34.96916566231569 6.817496819840656 6.817496819840656 6.817496819840656 0 2.309894379144197 2.0 0.7742275032520141 0.75 + + DTDHY{M(Oxidation (M))|F}{I|L}RY;DTDHY{M(Oxidation (M))|F}{I|L}YR;DTYDH{M(Oxidation (M))|F}{I|L}RY;DTDYH{M(Oxidation (M))|F}{I|L}RY;DTYDH{M(Oxidation (M))|F}{I|L}YR;DTDYH{M(Oxidation (M))|F}{I|L}YR;DTDHY{M(Oxidation (M))|F}Y{I|L}R;DTDHY{M(Oxidation (M))|F}YR{I|L};DTDHYY{M(Oxidation (M))|F}{I|L}R;DTYDH{M(Oxidation (M))|F}Y{I|L}R 9.3992;8.8442;8.5831;8.4824;8.0282;7.9275;7.4001;7.0864;6.7907;6.584 +;-;-;-;-;-;-;-;-;- + 2268 + 1 2.218 248625.6 1.0 4057 3504 7552 DOHH2_400M_050219_1,7563 DOHH2_400M_050219_1,7563,DTDHYFLRY True True DTDHYFLRY 42.281264 615.282580554485 29158518.0 7552.0 nc|ENSG00000124155|Q969N2-6|PIGT;;nc|ENSG00000124155|Q969N2-3|PIGT;;nc|ENSG00000124155|Q969N2-4|PIGT;;ENSG00000124155|ENST00000279036|PIGT;;nc|ENSG00000124155|Q969N2-5|PIGT 8.435043652852377 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7564 42.287 323.0 278380.0 25 0 19151.0 34291 SLRDKVLQL 9 124 536.3300364879084 1070.645520042617 2 536.3298828005791 MULTI CID FTMS 0 0 0 7552 190392.890625 1.0 0 0.0 12 Unmodified _SLRDKVLQL_ ENSG00000143624|ENST00000318967|INTS3;nc|ENSG00000143624|Q68E01-3|INTS3;nc|ENSG00000143624|Q68E01-4|INTS3;nc|ENSG00000143624|Q68E01|INTS3 47.594388314883695 0.0456443387682827 1 {[TV]|[{I|L}S]}RDKV{I|L}Q{I|L} 9 0 + 63.496 0.0 0.0 5.9306 5.9306 87.831 0.0 0.0 0.0 12.063890701261895 14.09256854528806 12.063890701261895 9.208187539523747 0 0.5866968715561641 1.154901959985743 0.5 0.4247425010840047 + + {[TV]|[{I|L}S]}RDKV{I|L}Q{I|L};{[TV]|[{I|L}S]}RDKV{I|L}[AG]{I|L};{[TV]|[{I|L}S]}[VG]DKV{I|L}Q{I|L};[Q{I|L}]{[ET]|[MV]}KV{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[QT]KV{I|L}Q{I|L};{[TV]|[{I|L}S]}[VG]DKV{I|L}[AG]{I|L};{[ET]|[MV]}[Q{I|L}]KV{I|L}Q{I|L};[Q{I|L}]{[ET]|[MV]}KV{I|L}[AG]{I|L};{[TV]|[{I|L}S]}R[WR]{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}P]{M(Oxidation (M))|F}V{I|L}Q{I|L} 5.9306;5.0706;5.0706;4.8039;4.5227;4.2146;3.9441;3.9438;3.8554;3.7334 +;-;-;-;-;-;-;-;-;- + 377 1 2.218 71110.1 1.0 4058 3504 7552 DOHH2_400M_050219_1,7564 DOHH2_400M_050219_1,7564,SLRDKVLQL True True TEMMRALGY 42.287151 536.329882800579 322676.875 7552.0 ENSG00000103351|ENST00000576634|CLUAP1 3.727238098780314 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7565 42.301 800.0 158090.0 25 0 5088.9 -1 0 124 917.4295223803028 1832.844491827405 2 917.4301635622978 MULTI CID FTMS 0 0 0 7552 151603.109375 1.0 0 0.0 13 1 [MN]PN{I|L}NEAQ{[SA]|[TG]}[QP]N{I|L} 15 -1 72.876 0.0 0.0 3.9761 0.0 0.0 0.0 208.07346521549064 208.07346521549064 4.675639043238263 0.0 0.0 0.0 0 1.0356668758921828 1.5228787452803376 0.0 0.8494850021680094 [MN]PN{I|L}NEAQ{[SA]|[TG]}[QP]N{I|L} 3.9761 - 3381 + 1 2.218 85417.0 0.6600000262260437 4059 3504 7552 DOHH2_400M_050219_1,7565 DOHH2_400M_050219_1,7565, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7566 42.315 800.0 256320.0 25 0 29419.0 + 29405 QLDTRVSEFY 10 161 629.3090070072388 1256.6034610812776 2 629.3096801638603 MULTI CID FTMS 0 0 0 7552 146944.671875 1.0 0 0.0 14 Unmodified _QLDTRVSEFY_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 57.72198328787511 0.0425618229276495 1 Q{I|L}[HN]W[H{I|L}]{M(Oxidation (M))|F}Y 9 6 + 49.451 0.0 0.0 3.9353 3.9353 82.589 0.0 0.0 0.0 19.873636255777345 7.974921663574291 7.974921663574291 11.88400174465228 0 1.1368617341927685 1.3979400086720375 0.0 0.0 Q{I|L}[HN]W[H{I|L}]{M(Oxidation (M))|F}Y;QAEY[KT][HA]{M(Oxidation (M))|F}Y;QAEY[KT]{[{M(Oxidation (M))|F}H]|[RQ]}AY;QA{M(Oxidation (M))|F}Q[RK][WM]Y;QA[RH]W[H{I|L}]{M(Oxidation (M))|F}Y;[TP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}W[H{I|L}]{M(Oxidation (M))|F}Y;[TP]{M(Oxidation (M))|F}[YG]{I|L}[H{I|L}]{M(Oxidation (M))|F}Y;{[ET]|[MV]}[WR]D[Q{I|L}]{M(Oxidation (M))|F}Y;[{M(Oxidation (M))|F}T][C(Carbamidomethyl (C))K][KT]Y{M(Oxidation (M))|F}Y;QAEY[KT][C(Carbamidomethyl (C))K]{[ET]|[MV]} 3.9353;2.9895;2.6281;2.3972;2.3535;2.1002;1.5076;1.3291;1.2714;1.1821 -;-;-;-;-;-;-;-;-;- 566 + 1 2.218 150536.0 0.6899999976158142 4060 3504 7552 DOHH2_400M_050219_1,7566 DOHH2_400M_050219_1,7566,QLDTRVSEFY True True QLDTRVSEFY 42.31483 629.30968016386 873630.875 7552.0 ENSG00000169093|ENST00000381317|ASMTL;;nc|ENSG00000292339|O95671-3|ASMTL;;nc|ENSG00000292339|O95671-2|ASMTL 2.679794271787008 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7567 42.32 168.0 475260.0 25 0 39334.0 + 31474 RPWLRPAAL 9 103 360.555315169021 1078.644116107263 3 360.5534850955009 MULTI CID FTMS 0 0 0 7552 135536.046875 1.0 0 0.0 15 Unmodified _RPWLRPAAL_ ENSG00000162073|ENST00000318782|PAQR4;nc|ENSG00000162073|Q8N4S7-2|PAQR4;nc|ENSG00000162073|Q8N4S7-3|PAQR4 10.799506525563784 0.5443532743200366 1 {I|L} 1 8 19.292 0.0 0.0 1.7885 0.0 0.0 947.5488840289412 0.0 947.5488840289412 0.0 4.599009323677095 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {I|L} 1.7885 + + 38 + 1 2.218 69388.5 1.0 4061 3504 7552 DOHH2_400M_050219_1,7567 DOHH2_400M_050219_1,7567,RPWLRPAAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7568 42.328 485.0 205000.0 25 0 33008.0 + 5390 DLKRLVVGY 9 126 531.8166191730912 1061.6186854129824 2 531.8164550662041 MULTI CID FTMS 0 0 0 7552 130995.234375 0.3817754515829276 5 -0.5298271179199219 16 Unmodified _DLKRLVVGY_ REV__ENSG00000094880|ENST00000394886|CDC23;REV__ENST00000482948.5_1_5:137536747-137548896:-|nuORF;REV__nc|ENSG00000094880|Q9UJX2-3|CDC23 4.3292370932331545 0.7635526921153418 1 Y 1 -1 11.42 0.0 0.0 1.0757 0.0 0.0 880.5439916647387 0.0 880.5439916647387 0.0 1.1423966425768484 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0757 + + 37 + 1 2.218 82360.5 1.0 4062 3504 7552 DOHH2_400M_050219_1,7568 DOHH2_400M_050219_1,7568,DLKRLVVGY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7569 42.342 776.0 192830.0 25 0 17764.0 + 40729 VLIAVPAAL 9 177 433.7880848836744 865.5616168341488 2 433.7880432009697 MULTI CID FTMS 0 0 0 7552 109214.203125 0.2063572305151693 3 -0.2707672119140625 17 Unmodified _VLIAVPAAL_ REV__ENSG00000060642|ENST00000674202|PIGV 0.6014990680409731 0.8936861360942873 1 W 1 -1 12.474 0.0 0.0 1.4412 0.0 0.0 661.4709776513348 0.0 661.4709776513348 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.4412 - 20 + 1 2.218 120836.5 1.0 4063 3504 7552 DOHH2_400M_050219_1,7569 DOHH2_400M_050219_1,7569,VLIAVPAAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7570 42.352 580.0 280600.0 25 0 21000.0 15834 ISKLIPHLC 9 181 512.3026182291331 1022.5906835250664 2 512.2831298708916 MULTI CID FTMS 0 0 0 7552 7858.02392578125 0.0282140947996129 -2 0.1555137634277343 18 Unmodified _ISKLIPHLC_ ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2 14.838274106304384 0.4350285940865338 1 {[TV]|[{I|L}S]}K{I|L}Y 5 5 30.207 0.0 0.0 2.954 0.0 0.0 0.0 415.2086394178975 415.2086394178975 15.60280296969275 0.0 0.0 0.0 0 0.0 0.3467874862246563 1.2302046884880935 0.0 {[TV]|[{I|L}S]}K{I|L}Y 2.954 - 1067 1 2.218 125978.6 1.0 4064 3504 7552 DOHH2_400M_050219_1,7570 DOHH2_400M_050219_1,7570,ISKLIPHLC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7572 42.356 4.3 9780000.0 25 0 1176800.0 + 35663 SVDPHGFISY 10 72 561.2666233727552 1120.5186938123104 2 561.2676269412041 MULTI CID FTMS 0 0 0 7571 9612520.0 0.3378981565650707 1 -0.0736351013183593 1 Unmodified _SVDPHGFISY_ ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;nc|ENSG00000105197|Q3ZCQ8-3|TIMM50 62.57269311338072 0.0298375429882549 1 [VS][WY]G{M(Oxidation (M))|F}{I|L}SY 9 3 + 58.554 0.0 0.0 5.2257 5.2257 86.996 0.0 0.0 0.0 12.21848749616356 9.47621246364342 9.47621246364342 12.21848749616356 0 0.9247425010840048 2.0 0.8494850021680094 0.0 [VS][WY]G{M(Oxidation (M))|F}{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[VS]G{M(Oxidation (M))|F}{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}SY;[WY][VS]G{M(Oxidation (M))|F}{I|L}SY;[WY]{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}SY;[HM][DV]S{I|L}G{I|L}SY;{[{M(Oxidation (M))|F}C]|[YS]}{[RE]|[WV]}G{M(Oxidation (M))|F}{I|L}SY;[HM][DV]S{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;[QA][WP]S{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;[HM][DV]S{I|L}P[WH] 5.2257;4.1352;4.0896;3.9781;3.9372;3.8672;3.4408;3.0674;2.6212;2.5312 -;-;-;-;-;-;-;-;-;- 293 1 2.208 37677.9 1.0 4065 3505 7571 DOHH2_400M_050219_1,7572 DOHH2_400M_050219_1,7572,SVDPHGFISY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7573 42.358 40.0 1144500.0 25 0 61083.0 -1 RCHRRRRRCCC 11 54 866.9070431313726 1731.799533329545 2 866.9080078005791 MULTI CID FTMS 0 0 0 7571 979899.0625 0.0843980261316314 6 -0.6528434753417969 2 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 1 [MN]PN{I|L}NWQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 14 -1 + 78.853 0.0 0.0 4.5532 4.5532 88.272 0.0 0.0 0.0 53.446757120868256 10.030382041820758 10.030382041820758 78.85283224327594 0 0.7742275032520141 1.5228787452803376 0.0 0.75 [MN]PN{I|L}NWQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 4.5532 - 220 + 1 2.208 37496.9 1.0 4066 3505 7571 DOHH2_400M_050219_1,7573 DOHH2_400M_050219_1,7573,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7574 42.359 34.0 1482200.0 25 0 355260.0 + 37657 TLLWLAER 8 70 501.29037773353184 1000.5662025338636 2 501.2907287478447 MULTI CID FTMS 0 0 0 7571 1660783.875 0.6225675330953074 3 -0.2620315551757812 3 Unmodified _TLLWLAER_ REV__ENSG00000179698|ENST00000323662|WDR97;REV__ENST00000533108.1_1_8:145164641-145165891:+|nuORF;REV__nc|ENSG00000179698|A6NE52-2|WDR97 2.302733041254933 0.8103549651115762 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.208 43277.5 1.0 4067 3505 7571 DOHH2_400M_050219_1,7574 DOHH2_400M_050219_1,7574,TLLWLAER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7575 42.36 70.0 896580.0 25 0 78841.0 + 8675 EVISKLYAV 9 99 511.2998212090615 1020.5850894849232 2 511.2997009158134 MULTI CID FTMS 0 0 0 7571 662945.0625 0.3590001950160768 -2 0.2071609497070312 4 Unmodified _EVISKLYAV_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 32.30548876998284 0.1201446275138228 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[HT]{I|L}{I|L}SG 9 5 47.598 0.0 0.0 4.6638 0.0 0.0 0.0 68.05142389468983 68.05142389468983 21.785437214322336 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.8494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[HT]{I|L}{I|L}SG 4.6638 - 498 + 1 2.208 52848.5 1.0 4068 3505 7571 DOHH2_400M_050219_1,7575 DOHH2_400M_050219_1,7575,EVISKLYAV True True EVISKLYAV 42.360395 511.299700915813 10212863.0 7571.0 nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 6.402676423390706 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7576 42.363 101.0 394870.0 25 0 42602.0 -1 ALGCLVLLE 9 76 494.2823599080205 986.550166882841 2 494.2825500369072 MULTI CID FTMS 0 0 0 7571 434840.53125 0.5007589352033655 5 -0.5258674621582031 5 Carbamidomethyl (C) _ALGC(Carbamidomethyl (C))LVLLE_ ENSG00000166341|ENST00000299441|DCHS1 5.230669730166228 0.7320841359114558 1 V{I|L}{[QN]|[E{I|L}]|[KN]} 4 -1 16.198 0.0 0.0 1.6419 0.0 0.0 514.2503529279312 0.0 514.2503529279312 0.0 2.218487496163561 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}{[QN]|[E{I|L}]|[KN]} 1.6419 + + 23 1 2.208 38644.5 1.0 4069 3505 7571 DOHH2_400M_050219_1,7576 DOHH2_400M_050219_1,7576,ALGCLVLLE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7577 42.366 152.0 361260.0 25 0 15973.0 -1 0 75 901.4175555662948 1800.8205581993896 2 901.919482409954 MULTI CID FTMS 0 0 0 7571 312026.34375 0.5746596821635952 -1 0.1163444519042968 6 1 [NP]{I|L}[WH]{[{M(Oxidation (M))|F}H]|[RQ]}DY{I|L}HP[EP] 14 -1 + 32.959 0.0 0.0 1.8302 1.8302 78.068 0.0 0.0 0.0 4.559319556497243 4.956991545272942 4.559319556497243 10.9596001378873 0 0.0 0.0 0.3807196863200844 0.7302046884880937 [NP]{I|L}[WH]{[{M(Oxidation (M))|F}H]|[RQ]}DY{I|L}HP[EP];[NP]{I|L}[WH]{[RE]|[WV]}NY{I|L}H[YC(Carbamidomethyl (C))] 1.8302;1.2216 -;- 199 1 2.208 41079.4 1.0 4070 3505 7571 DOHH2_400M_050219_1,7577 DOHH2_400M_050219_1,7577, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7578 42.37 206.0 221560.0 25 0 14838.0 + 22301 LPSDRRSL 8 95 472.2699614720382 942.5253700108764 2 472.2696716189384 MULTI CID FTMS 0 0 0 7571 219729.234375 1.0 0 0.0 7 Unmodified _LPSDRRSL_ REV__ENSG00000071054|ENST00000324219|MAP4K4;REV__nc|ENSG00000071054|O95819-2|MAP4K4;REV__nc|ENSG00000071054|O95819-3|MAP4K4;REV__nc|ENSG00000071054|O95819-4|MAP4K4;REV__nc|ENSG00000071054|O95819-5|MAP4K4;REV__nc|ENSG00000071054|O95819-6|MAP4K4;REV__nc|ENSG00000071054|O95819|MAP4K4 28.17323086031832 0.4514957916281387 1 [PS]{I|L} 3 -1 19.654 0.0 0.0 2.0852 0.0 0.0 0.0 642.3325043705045 642.3325043705045 2.93182501400722 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2742275032520141 0.0 [PS]{I|L} 2.0852 - 96 1 2.208 38670.7 1.0 4071 3505 7571 DOHH2_400M_050219_1,7578 DOHH2_400M_050219_1,7578,LPSDRRSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7579 42.376 362.0 220880.0 25 0 19450.0 + 14254 IEDPQIQAHW 10 93 618.8041323269922 1235.5937117207843 2 618.8035766482353 MULTI CID FTMS 0 0 0 7571 168525.265625 0.7149842175517159 1 -0.0736351013183593 8 Unmodified _IEDPQIQAHW_ ENSG00000042429|ENST00000251871|MED17 60.07390631473393 0.0363923079357811 1 {I|L}EDPQ{I|L}QAHW 10 0 + 103.37 0.0 0.0 8.366 8.366 92.003 0.0 0.0 0.0 36.53212513775344 10.969100130080562 10.969100130080562 9.164539485499247 0 0.805462187404089 2.0 0.4247425010840047 0.8494850021680094 + + {I|L}EDPQ{I|L}QAHW;{I|L}EDP[AG]{I|L}QAHW;{I|L}EDPQ{I|L}[AG]AHW;{I|L}EDPQ{I|L}Q[KC]Y;{I|L}EDP[AG]{I|L}Q[KC]Y;{I|L}EDPQ{I|L}[AG][KC]Y;{I|L}EDP[AG]{I|L}[AG]AHW;{I|L}TC(Carbamidomethyl (C))[HA]{I|L}QAHW;{[CT]|[{M(Oxidation (M))|F}G]}HAQ{I|L}Q[WH]{I|L};{[CT]|[{M(Oxidation (M))|F}G]}HAQ{I|L}Q[YC(Carbamidomethyl (C))]{I|L} 8.366;7.6243;7.6243;7.4783;6.7365;6.7365;6.198;2.935;2.8281;2.8281 +;-;-;-;-;-;-;-;-;- + 535 + 1 2.208 65971.3 1.0 4072 3505 7571 DOHH2_400M_050219_1,7579 DOHH2_400M_050219_1,7579,IEDPQIQAHW True True IEDPQIQAHW 42.376061 618.803576648235 1478665.875 7571.0 ENSG00000042429|ENST00000251871|MED17 8.947882016499838 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7580 42.381 254.0 301850.0 25 0 33313.0 + 25538 NERYAYEW 8 109 565.7476511388389 1129.4807493444778 2 565.7491332888603 MULTI CID FTMS 0 0 0 7571 167228.296875 0.9575813530848788 -1 0.1163444519042968 9 Unmodified _NERYAYEW_ ENSG00000275066|ENST00000612223|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;nc|ENSG00000275066|Q9UMZ2-6|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG 20.41453444215458 0.6093278397249439 1 [YE][RN]AYEW 8 2 + 46.264 0.0 0.0 4.0961 4.0961 70.499 0.0 0.0 0.0 0.2361868861143818 4.788559305164171 0.2361868861143818 0.2361868861143818 0 0.4247425010840047 1.154901959985743 0.0 0.7614393726401688 [YE][RN]AYEW;{[DA]|[EG]}GRYAYEW;{[QD]|[EN]|[WG]|[KD]|[RS]}RYAYEW;{[QD]|[EN]|[WG]|[KD]|[RS]}[VG]YAYEW;{[DA]|[EG]}GR[WP]NEW;{[QD]|[EN]|[WG]|[KD]|[RS]}R[WP]NEW;{[DA]|[EG]}G[VG]YAYEW;[WE][H{I|L}][KC]EW;{[DA]|[EG]}G[VG][WP]NEW;{[DA]|[EG]}GR[WP]GGEW 4.0961;4.0751;3.9855;3.1654;2.9228;2.8331;2.5857;2.2306;2.1076;2.1076 -;-;+;-;-;-;-;-;-;- + 169 1 2.208 63812.7 1.0 4073 3505 7571 DOHH2_400M_050219_1,7580 DOHH2_400M_050219_1,7580,NERYAYEW False True NERYAYEW 42.380795 565.74913328886 1113148.375 7571.0 nc|ENSG00000275066|Q9UMZ2-6|SYNRG;;nc|ENSG00000275066|Q9UMZ2-4|SYNRG;;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;;ENSG00000275066|ENST00000612223|SYNRG;;nc|ENSG00000275066|Q9UMZ2-9|SYNRG;;nc|ENSG00000275066|Q9UMZ2-3|SYNRG 6.26018222173055 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7581 42.395 800.0 306590.0 25 0 42406.0 + 14276 IEIENFKSY 9 168 571.7902148184667 1141.5658767037332 2 571.7913085818291 MULTI CID FTMS 0 0 0 7571 104144.1953125 0.0969477628743379 -2 0.2071609497070312 10 Unmodified _IEIENFKSY_ ENSG00000072501|ENST00000322213|SMC1A 79.59630418116434 0.0176145593575188 1 {I|L}E{I|L}EN{M(Oxidation (M))|F}KSY 9 0 + 104.57 0.0 0.0 9.16 9.16 93.844 0.0 0.0 0.0 56.10563276647278 14.973024840566469 14.973024840566469 9.208187539523747 0 0.805462187404089 1.6989700043360187 1.7218487496163564 0.2742275032520141 + + {I|L}E{I|L}EN{M(Oxidation (M))|F}KSY;{I|L}E{I|L}EGG{M(Oxidation (M))|F}KSY;{I|L}E{I|L}EN[YK]AY;{I|L}E{I|L}EN[YK]S{M(Oxidation (M))|F};{I|L}E{I|L}E[PG]{I|L}EGW;{I|L}E{I|L}[PG]E{I|L}EGW;{I|L}E{I|L}E[HM]KGW;{[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}KSEY{I|L};{I|L}E{I|L}EGG[YK]AY;{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}S{I|L}EY{I|L} 9.16;8.3534;6.8925;6.7174;6.4796;6.4349;6.3041;6.161;6.0859;5.9764 +;-;-;-;-;-;-;-;-;- + 5568 + 1 2.208 181382.7 0.5799999833106995 4074 3505 7571 DOHH2_400M_050219_1,7581 DOHH2_400M_050219_1,7581,IEIENFKSY True True IEIENFKSY 42.394626 571.791308581829 5395321.0 7571.0 ENSG00000072501|ENST00000322213|SMC1A 6.641718069712321 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7582 42.405 568.0 155370.0 25 0 23743.0 18380 KVPQLEIVPN 10 119 568.8369560872457 1135.6593592412912 2 568.8378173708916 MULTI CID FTMS 0 0 0 7571 95051.390625 1.0 0 0.0 11 Unmodified _KVPQLEIVPN_ CON__P02662 24.99096001346401 0.4071966087057876 1 [QP]{I|L}E{I|L}VKVPN 10 4 + 62.0 0.0 0.0 5.4594 5.4594 83.701 0.0 0.0 0.0 4.259687322722812 44.26238605503259 4.259687322722812 7.712914159311609 0 0.9291746928241126 0.0 1.031234684152075 0.0 [QP]{I|L}E{I|L}VKVPN;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}P]{I|L}VKVPN;[QP]{I|L}EV{I|L}KVPN;[EP][Q{I|L}]{I|L}VKVPN;[QP]{I|L}EVK{I|L}VPN;[DP][RV]{I|L}VKVPN;{[DS]|[MA]|[CV]|TT}[HK]{I|L}VKVPN;[QT]VKV{I|L}[KT]GY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}P]V{I|L}KVPN;{[CP]|[EA]}G[{I|L}P]{I|L}VKVPN 5.4594;4.7802;4.6642;4.5091;4.3991;4.3473;4.0547;4.0311;3.985;3.9722 -;-;-;-;-;-;-;-;-;- 651 1 2.208 72869.7 1.0 4075 3505 7571 DOHH2_400M_050219_1,7582 DOHH2_400M_050219_1,7582,KVPQLEIVPN False True QEMPEPKFM 42.404582 568.837817370892 449108.28125 7571.0 ENSG00000035681|ENST00000038176|NSMAF;;ENST00000519858.1_1_8:59513803-59535956:-|nuORF;;nc|ENSG00000035681|Q92636-2|NSMAF 2.007346749305725 2.0 False 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_1 7583 42.409 237.0 665910.0 25 0 51085.0 + 5480 DLRTKGFSL 9 155 518.7935097689558 1035.5724666047115 2 518.7931396365166 MULTI CID FTMS 0 0 0 7571 196353.078125 0.4569270537488091 -1 0.1163444519042968 12 Unmodified _DLRTKGFSL_ ENSG00000014216|ENST00000279247|CAPN1;ENST00000530567.1_1_11:64976762-64977505:+|nuORF 51.487983226225225 0.0371074584807926 1 {I|L}DR[KP][HA]S{I|L} 9 5 + 53.241 0.0 0.0 5.1412 5.1412 74.131 0.0 0.0 0.0 19.50754319461129 10.717196696094431 10.717196696094431 0.2422750325201406 0 1.2614393726401687 1.6989700043360187 1.25 0.3054621874040891 {I|L}DR[KP][HA]S{I|L};D{I|L}R[KP][HA]S{I|L};{NN|[MP]|[D{I|L}]|[EV]}RTKG{M(Oxidation (M))|F}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}RTKGS{M(Oxidation (M))|F}{I|L};{I|L}DR[DV]KKY;D{I|L}R[DV]KKY;{I|L}DR[KP][VP][DP];D{I|L}R[KP][VP][DP];{NN|[MP]|[D{I|L}]|[EV]}RTK[YQ]{I|L};{NN|[MP]|[D{I|L}]|[EV]}RTKGT[{M(Oxidation (M))|F}V] 5.1412;5.1178;4.4939;3.9932;3.6745;3.6511;2.8915;2.8681;2.2795;2.1783 -;-;+;-;-;-;-;-;-;- + 438 + 1 2.208 120532.4 1.0 4076 3505 7571 DOHH2_400M_050219_1,7583 DOHH2_400M_050219_1,7583,DLRTKGFSL True True DLRTKGFSL 42.40903 518.793139636517 1638824.0 7571.0 ENSG00000014216|ENST00000279247|CAPN1;;ENST00000530567.1_1_11:64976762-64977505:+|nuORF 4.263590971628825 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7584 42.416 387.0 368330.0 25 0 18340.0 -1 0 103 754.365725652616 3013.433796744064 4 754.6166869997978 MULTI CID FTMS 0 0 0 7571 152054.078125 0.585433896298225 -1 0.1163444519042968 13 1 [MN]PN 4 -1 51.995 0.0 0.0 1.7254 0.0 0.0 0.0 2554.229116926098 2554.229116926098 37.30204688488094 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.8494850021680094 [MN]PN 1.7254 - 114 + 1 2.208 109861.8 1.0 4077 3505 7571 DOHH2_400M_050219_1,7584 DOHH2_400M_050219_1,7584, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7585 42.425 463.0 236790.0 25 0 18617.0 + 36459 TAAFHLRL 8 141 464.7701436814527 927.5257344297054 2 464.7693969607353 MULTI CID FTMS 0 0 0 7571 146765.671875 0.5939345848889888 1 -0.0736351013183593 14 Unmodified _TAAFHLRL_ REV__ENST00000482108.1_2_7:94296565-94296640:+|nuORF 9.347437153973935 0.7675937258251505 1 {I|L} 1 -1 11.99 0.0 0.0 1.2927 0.0 0.0 796.4306854568523 0.0 796.4306854568523 0.0 11.712113404111031 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2927 + + 32 + 1 2.208 88410.0 1.0 4078 3505 7571 DOHH2_400M_050219_1,7585 DOHH2_400M_050219_1,7585,TAAFHLRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7587 42.43 42.0 1267700.0 25 0 246800.0 + 5526 DMDRVLLKY 9 57 576.8074519162129 1151.6003508992258 2 576.8080932497978 MULTI CID FTMS 0 0 0 7586 1016258.625 0.3386706626966304 2 -0.1883964538574218 1 Unmodified _DMDRVLLKY_ chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;ENSG00000213999|ENST00000424583|MEF2B;nc|ENSG00000213999|Q02080|MEF2B 24.99096001346401 0.2132109383330889 1 V{I|L}{I|L}KY 5 4 41.058 0.0 0.0 3.5653 0.0 0.0 517.193651267775 0.0 517.193651267775 0.0 29.275007347313657 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + V{I|L}{I|L}KY 3.5653 + + 47 1 2.195 44641.9 1.0 4079 3506 7586 DOHH2_400M_050219_1,7587 DOHH2_400M_050219_1,7587,DMDRVLLKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7588 42.432 62.0 601310.0 25 0 44151.0 + 29081 QELSGQGWTY 10 76 584.7668245561241 1167.519096179048 2 584.7670165896416 MULTI CID FTMS 0 0 0 7586 651166.125 0.541503817781804 1 -0.0807876586914062 2 Unmodified _QELSGQGWTY_ ENSG00000237649|ENST00000428849|KIFC1 24.020572477871973 0.4289996903560794 1 SATY 4 7 31.414 0.0 0.0 2.6907 0.0 0.0 727.3294732315857 0.0 727.3294732315857 0.0 20.445312593723983 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SATY 2.6907 - 100 + 1 2.195 35638.3 1.0 4080 3506 7586 DOHH2_400M_050219_1,7588 DOHH2_400M_050219_1,7588,QELSGQGWTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7589 42.433 31.0 2098200.0 25 0 393600.0 + 1191 AIDEDVLRY 9 77 547.2796985624752 1092.5448441917504 2 547.2801391482353 MULTI CID FTMS 0 0 0 7586 1541672.25 0.5569224792003754 -1 0.0736351013183593 3 Unmodified _AIDEDVLRY_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 56.17704186161178 0.0281986971544335 1 [{I|L}A]DEDV{I|L}RY 9 0 + 87.087 0.0 0.0 7.971 7.971 98.18 0.0 0.0 0.0 55.71456278567766 14.09256854528806 14.09256854528806 87.0872875024979 0 0.9247425010840048 2.0 0.3252574989159953 0.6505149978319906 + + [{I|L}A]DEDV{I|L}RY 7.971 + + 88 + 1 2.195 54093.4 1.0 4081 3506 7586 DOHH2_400M_050219_1,7589 DOHH2_400M_050219_1,7589,AIDEDVLRY True True AIDEDVLRY 42.432986 547.280139148235 13851789.0 7586.0 nc|ENSG00000100023|Q13356-2|PPIL2;;ENSG00000100023|ENST00000398831|PPIL2 7.250972906748454 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7590 42.435 102.0 571040.0 25 0 85566.0 + -1 VLCPPELK 8 80 478.26960138687537 954.5246498405508 2 478.2698242068291 MULTI CID FTMS 0 0 0 7586 358566.15625 0.2587308248229333 6 -0.6531448364257812 4 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))PPELK_ REV__ENSG00000142207|ENST00000382751|URB1 2.889219685676258 0.8067950007271085 1 {I|L} 1 -1 9.8329 0.0 0.0 1.0301 0.0 0.0 823.4294177622289 0.0 823.4294177622289 0.0 8.239087409443187 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0301 + + 8 + 1 2.195 49883.9 1.0 4082 3506 7586 DOHH2_400M_050219_1,7590 DOHH2_400M_050219_1,7590,VLCPPELK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7591 42.439 202.0 426260.0 25 0 34176.0 + 27243 PGRLKLQL 8 103 462.8030629459651 923.5915729587302 2 462.8031799197197 MULTI CID FTMS 0 0 0 7586 300574.8125 0.5986017514700865 -1 0.0736351013183593 5 Unmodified _PGRLKLQL_ nc|ENSG00000291085|Q9H0A3|TMEM191A 23.1484247019978 0.5573009939494978 1 [VP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KQ{I|L} 8 3 [VP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} + + 15.573 -10.679 -1.991 1.6861 1.6861 48.686 0.0 0.0 0.0 0.0 5.087969971425574 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 [VP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KQ{I|L} 1.6861 - 65 + 1 2.195 71675.5 1.0 4083 3506 7586 DOHH2_400M_050219_1,7591 DOHH2_400M_050219_1,7591,PGRLKLQL False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7592 42.443 190.0 492430.0 25 0 40814.0 + 8412 ESERLLRELY 10 98 436.5702064691257 1306.688790007577 3 436.5699340701103 MULTI CID FTMS 0 0 0 7586 247932.03125 0.5169606785196666 -1 0.0736351013183593 6 Unmodified _ESERLLRELY_ ENSG00000070669|ENST00000394308|ASNS;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS 21.59015148037692 0.4836074274810599 1 E{[ES]|[DT]|[{I|L}C]}R{I|L}{I|L}SGY 9 3 30.908 0.0 0.0 2.3653 0.0 0.0 0.0 269.1550387018188 269.1550387018188 14.921525057367408 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{[ES]|[DT]|[{I|L}C]}R{I|L}{I|L}SGY 2.3653 - 186 + 1 2.195 82466.3 1.0 4084 3506 7586 DOHH2_400M_050219_1,7592 DOHH2_400M_050219_1,7592,ESERLLRELY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7593 42.446 169.0 406660.0 25 0 55607.0 + -1 PMGPVKAP 8 80 406.71856867126576 0 406.7184631228447 PEAK CID FTMS 0 0 0 7586 226662.859375 1.0 0 0.0 7 Oxidation (M) _PM(Oxidation (M))GPVKAP_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 2.889219685676258 0.5898224805723975 1 {I|L}V 2 -1 9.8206 0.0 0.0 1.2103 0.0 0.0 262.0940068953643 334.1522616022094 596.2462684975737 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}V 1.2103 - 15 + 1 2.195 57377.9 1.0 4085 3506 7586 DOHH2_400M_050219_1,7593 DOHH2_400M_050219_1,7593,PMGPVKAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7594 42.453 396.0 298740.0 25 0 36454.0 + 6027 DSDMQTLVY 9 135 536.2364581500514 1070.4583633669026 2 536.2365600466728 MULTI CID FTMS 0 0 0 7586 222345.40625 0.137946048083582 -2 0.1899795532226562 8 Unmodified _DSDMQTLVY_ ENSG00000149823|ENST00000279281|VPS51 49.93300154707207 0.0405168250806675 1 {[DS]|[MA]|[CV]|TT}DMQT{I|L}VY 9 0 + 38.898 0.0 0.0 3.6337 3.6337 80.419 0.0 0.0 0.0 5.118705200516025 17.77819381628924 5.118705200516025 9.208187539523756 0 0.7742275032520141 0.0 1.5114393726401687 0.0 + + {[DS]|[MA]|[CV]|TT}DMQT{I|L}VY;{[DS]|[MA]|[CV]|TT}DM[AG]T{I|L}VY;[MD]QSDT{I|L}VY;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DSDT{I|L}VY;[QT][EC]DT{I|L}VY;[MD][AG]SDT{I|L}VY;{[DS]|[MA]|[CV]|TT}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DT{I|L}VY;{[DS]|[MA]|[CV]|TT}DM[{I|L}T]QVY;{[ET]|[MV]}[DC]QT{I|L}VY;{[CA]|SS}{[CP]|[EA]}SDT{I|L}VY 3.6337;2.7735;2.7217;2.6675;2.2407;1.8615;1.8595;1.7957;1.7937;1.5802 +;-;-;-;-;-;-;-;-;- + 636 1 2.195 96547.6 1.0 4086 3506 7586 DOHH2_400M_050219_1,7594 DOHH2_400M_050219_1,7594,DSDMQTLVY True True DSDMQTLVY 42.453063 536.236560046673 18587670.0 7586.0 ENSG00000149823|ENST00000279281|VPS51 7.859541257222493 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7595 42.461 455.0 255590.0 25 0 18113.0 + 11127 GEIDLAKLKKF 11 134 421.2555372146098 1260.7447822440297 3 421.5896484255791 MULTI CID FTMS 0 0 0 7586 204180.265625 1.0 0 0.0 9 Unmodified _GEIDLAKLKKF_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 33.4449034751529 0.3133739643825231 1 W{I|L}D{I|L}AKN 7 6 57.026 0.0 0.0 4.5232 0.0 0.0 0.0 417.28835149391136 417.28835149391136 19.7451328186527 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 W{I|L}D{I|L}AKN 4.5232 - 716 + 1 2.195 97391.0 1.0 4087 3506 7586 DOHH2_400M_050219_1,7595 DOHH2_400M_050219_1,7595,GEIDLAKLKKF False True GEIDLAKLKKF 42.461136 421.2556 1084548.125 7586.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 5.752600034077962 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7596 42.475 800.0 223470.0 25 0 29155.0 -1 0 189 412.7967595676372 823.5789662020744 2 412.7962524294853 MULTI CID FTMS 0 0 0 7586 143795.921875 1.0 0 0.0 10 1 {I|L}{I|L}{I|L} 3 -1 11.198 0.0 0.0 1.3597 0.0 0.0 162.10083164741383 319.20404993228755 481.3048815797014 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L} 1.3597 - 57 + 1 2.195 140473.8 0.5199999809265137 4088 3506 7586 DOHH2_400M_050219_1,7596 DOHH2_400M_050219_1,7596, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7597 42.483 424.0 295580.0 25 0 18802.0 + + 32968 SEINIAPRI 9 128 506.29331371512814 1010.5720744970564 2 506.2954894900322 MULTI CID FTMS 0 0 0 7586 95908.0390625 1.0 0 0.0 11 Unmodified _SELVTPLRP_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1 16.942295170755138 0.3780752226737986 1 [VS]R{I|L}{I|L}N[Y{M(Oxidation (M))|F}] 8 -1 + 36.82 0.0 0.0 3.6435 3.6435 72.163 0.0 0.0 0.0 2.487737688117228 0.6694678963061307 0.6694678963061307 2.487737688117228 0 0.0 1.5228787452803376 0.0 0.4247425010840047 [VS]R{I|L}{I|L}N[Y{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}N{I|L}A[RP]{I|L};[VS]R{I|L}N{I|L}[Y{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}{I|L}NA[RP]{I|L};{[QS]|[NT]}{I|L}N{I|L}{I|L}R[PA];[VS]R{I|L}{I|L}GG[Y{M(Oxidation (M))|F}];[{I|L}V]Q[QT]{I|L}[Y{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}GG{I|L}A[RP]{I|L};{[QS]|[NT]}{I|L}{I|L}N{I|L}R[PA];[VS]R{I|L}GG{I|L}[Y{M(Oxidation (M))|F}] 3.6435;3.3974;3.3456;3.0995;2.7776;2.727;2.6817;2.4862;2.4797;2.4291 -;-;-;-;-;-;-;-;-;- 513 1 2.195 99829.3 1.0 4089 3506 7586 DOHH2_400M_050219_1,7597 DOHH2_400M_050219_1,7597,SELVTPLRP False False SEINIAPRI 42.482513 506.295489490032 799182.6875 7586.0 ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 3.665689468383789 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7598 42.487 237.0 428720.0 25 0 160600.0 + 5527 DMDRVLLKY 9 107 384.8741857687128 1151.6007279063383 3 384.8742248415947 MULTI CID FTMS 0 0 0 7586 252904.046875 0.481070315580834 2 -0.1883964538574218 12 Unmodified _DMDRVLLKY_ chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;ENSG00000213999|ENST00000424583|MEF2B;nc|ENSG00000213999|Q02080|MEF2B 13.90604991867851 0.4602628045680013 1 Y 1 8 12.764 0.0 0.0 1.1084 0.0 0.0 970.5260036405168 0.0 970.5260036405168 0.0 -12.814068502638314 -12.814068502638314 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1084 + + 39 + 1 2.195 85178.8 1.0 4090 3506 7586 DOHH2_400M_050219_1,7598 DOHH2_400M_050219_1,7598,DMDRVLLKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7599 42.501 800.0 269390.0 25 0 27120.0 + 44000 YLDPVQRDLY 10 175 641.3244850328077 0 641.3250610232353 PEAK CID FTMS 0 0 0 7586 152146.296875 0.766954360316014 -1 0.0736351013183593 13 Unmodified _YIDPTMIQSLT_ nc|ENSG00000197343|Q8N720-2|ZNF655;ENST00000467680.5_1_7:99159903-99161679:+|nuORF 28.49450938151212 0.2463772716552905 1 {I|L}DPVQD 6 7 41.525 0.0 0.0 3.2425 0.0 0.0 163.05307055214035 447.2363375299438 610.2894080820842 0.0 0.0 0.0 0.0 0 0.5 0.0 0.7302046884880937 0.3807196863200844 {I|L}DPVQD 3.2425 - 154 + 1 2.195 158650.4 0.6899999976158142 4091 3506 7586 DOHH2_400M_050219_1,7599 DOHH2_400M_050219_1,7599,YIDPTMIQSLT False False YLDPVQRDLY 42.500786 641.325061023235 1033964.9375 7586.0 nc|ENSG00000197343|Q8N720-2|ZNF655;;ENST00000467680.5_1_7:99159903-99161679:+|nuORF 6.863549073537191 2.0 False 10.0 True non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_1 7600 42.506 212.0 632430.0 25 0 53682.0 -1 0 105 1031.4509768166308 3091.331101050093 3 1031.786303699017 MULTI CID FTMS 0 0 0 7586 135360.234375 0.0627739631688228 -2 0.1899795532226562 14 1 [QT]PGYAQTASY 11 -1 38.235 0.0 0.0 1.2368 0.0 0.0 0.0 1920.7973298198435 1920.7973298198435 6.89830317225438 0.0 0.0 0.0 0 0.0 0.0 1.3516784832448856 0.9258337024346172 [QT]PGYAQTASY 1.2368 - 34510 1 2.195 90348.0 1.0 4092 3506 7586 DOHH2_400M_050219_1,7600 DOHH2_400M_050219_1,7600, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7602 42.512 68.0 612960.0 25 0 30507.0 -1 0 70 873.9150509860758 1745.8155490389515 2 873.9227783083916 MULTI CID FTMS 0 0 0 7601 662621.375 0.1111934934271092 5 -0.572357177734375 1 1 [MN][NP]{I|L}NEAQ{I|L} 10 -1 58.377 0.0 0.0 3.3438 0.0 0.0 0.0 618.2653902643186 618.2653902643186 36.25447181216778 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.4247425010840047 [MN][NP]{I|L}NEAQ{I|L} 3.3438 - 275 + 1 2.179 33696.1 1.0 4093 3507 7601 DOHH2_400M_050219_1,7602 DOHH2_400M_050219_1,7602, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7603 42.514 116.0 563550.0 25 0 49723.0 + 36822 TEKPKFIL 8 98 488.2973801062878 974.5802072793756 2 488.2974731326103 MULTI CID FTMS 0 0 0 7601 404607.78125 0.9961254242060776 1 -0.1076087951660156 2 Unmodified _TEKPKFIL_ ENSG00000159063|ENST00000299626|ALG8;nc|ENSG00000159063|Q9BVK2-2|ALG8 39.957323273325 0.2350051964751539 1 [KP]{M(Oxidation (M))|F}K{[ET]|[MV]}{I|L}{I|L} 8 5 + 31.222 0.0 0.0 3.2036 3.2036 75.943 0.0 0.0 0.0 2.174617874626037 12.047509540478028 2.174617874626037 7.059771852360797 0 0.7059771852360797 0.0 0.3807196863200844 0.0 [KP]{M(Oxidation (M))|F}K{[ET]|[MV]}{I|L}{I|L};[KP]{M(Oxidation (M))|F}{I|L}K{[ET]|[MV]}{I|L};[KP]{M(Oxidation (M))|F}K{I|L}{[ET]|[MV]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KP]K{[ET]|[MV]}{I|L} 3.2036;2.4792;2.1703;0.68343 -;-;-;- 330 1 2.179 54706.4 1.0 4094 3507 7601 DOHH2_400M_050219_1,7603 DOHH2_400M_050219_1,7603,TEKPKFIL False True TEKPKFIL 42.513915 488.29747313261 2331231.25 7601.0 ENSG00000159063|ENST00000299626|ALG8;;nc|ENSG00000159063|Q9BVK2-2|ALG8 2.449840227762858 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7604 42.516 115.0 510670.0 25 0 87959.0 + 26417 NTDPWAGYRY 10 61 621.7803332521556 1241.5461135711112 2 621.7805663943291 MULTI CID FTMS 0 0 0 7601 320642.8125 0.2445842146775176 -1 0.0807876586914062 3 Unmodified _NTDPWAGYRY_ ENSG00000164024|ENST00000296411|METAP1;ENST00000510209.5_1_4:99916904-99957225:+|nuORF;ENST00000513199.5_1_4:99943548-99960531:+|nuORF 57.72198328787511 0.0425618229276495 1 {[QS]|[NT]}DPWA{[QV]|[N{I|L}]|[RA]|[KV]}DQ 10 4 68.804 0.0 0.0 5.5418 0.0 0.0 0.0 84.0098131769164 84.0098131769164 45.87205316164642 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.3494850021680094 0.7059771852360797 {[QS]|[NT]}DPWA{[QV]|[N{I|L}]|[RA]|[KV]}DQ 5.5418 - 491 + 1 2.179 48809.6 1.0 4095 3507 7601 DOHH2_400M_050219_1,7604 DOHH2_400M_050219_1,7604,NTDPWAGYRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7605 42.521 240.0 341670.0 25 0 41815.0 + + 19562 FIISRTQAL 9 91 524.3068590865568 1046.5991652399134 2 524.8112670779228 MULTI CID FTMS 0 0 0 7601 233271.109375 0.3286043143285985 -5 0.4262809753417969 4 Unmodified _LFRQRSGAL_ nc|ENSG00000083312|Q92973-2|TNPO1;ENSG00000083312|ENST00000337273|TNPO1;nc|ENSG00000083312|Q92973-3|TNPO1 18.13498045792455 0.3457906370836843 1 S{I|L}{I|L}Q 4 -1 36.186 0.0 0.0 3.4574 0.0 0.0 587.3422108380875 0.0 587.3422108380875 0.0 23.711375162600703 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 S{I|L}{I|L}Q 3.4574 - 35 1 2.179 70285.3 1.0 4096 3507 7601 DOHH2_400M_050219_1,7605 DOHH2_400M_050219_1,7605,LFRQRSGAL False False FIISRTQAL 42.520829 524.811267077923 1496265.875 7601.0 nc|ENSG00000083312|Q92973-2|TNPO1;;ENSG00000083312|ENST00000337273|TNPO1;;nc|ENSG00000083312|Q92973-3|TNPO1 2.2856964270273843 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7606 42.526 269.0 292430.0 25 0 31733.0 + -1 IMWTKRKK 8 117 553.8305350476262 1105.6465171620523 2 553.8328124880791 MULTI CID FTMS 0 0 0 7601 234996.765625 0.6043675560100519 -3 0.2707672119140625 5 Oxidation (M) _IM(Oxidation (M))WTKRKK_ REV__ENST00000357607.6_1_X:15544172-15549526:+|nuORF 7.910154910731844 0.7763180056447161 1 {I|L}P 2 -1 26.819 0.0 0.0 2.4257 0.0 0.0 0.0 892.4899996393186 892.4899996393186 15.7101229022906 0.0 0.0 0.0 0 0.0 0.585026652029182 0.0 0.0 {I|L}P 2.4257 - 122 + 1 2.179 61484.1 1.0 4097 3507 7601 DOHH2_400M_050219_1,7606 DOHH2_400M_050219_1,7606,IMWTKRKK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7607 42.53 234.0 277760.0 25 0 33867.0 + 42503 VTLAASHRG 9 105 456.2566899302252 910.4988269272504 2 456.2566100955009 MULTI CID FTMS 0 0 0 7601 224148.390625 0.4382149345807022 4 -0.4984207153320312 6 Unmodified _VTLAASHRG_ REV__ENST00000291574.8_1_21:45523422-45523842:+|nuORF 7.910154910731844 0.6385446671287552 1 E 1 -1 3.0989 0.0 0.0 0.34036 0.0 0.0 344.2036741946316 434.2370394342407 778.4407136288722 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.34036 - 23 + 1 2.179 53176.4 1.0 4098 3507 7601 DOHH2_400M_050219_1,7607 DOHH2_400M_050219_1,7607,VTLAASHRG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7608 42.537 402.0 342030.0 25 0 94712.0 + 8413 ESERLLRELY 10 99 654.3510328710478 1306.6875128088957 2 654.3522216677666 MULTI CID FTMS 0 0 0 7601 222312.09375 1.0 0 0.0 7 Unmodified _ESERLLRELY_ ENSG00000070669|ENST00000394308|ASNS;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS 60.899326713953855 0.0342270825141046 1 ESER{I|L}{I|L}RE{I|L}Y 10 0 + 72.039 0.0 0.0 5.5131 5.5131 89.096 0.0 0.0 0.0 59.27948461635836 15.026975159433531 15.026975159433531 15.938265792396251 0 2.3622731327798547 1.3010299956639813 0.0 0.0 + + ESER{I|L}{I|L}RE{I|L}Y;{[ES]|[DT]|[{I|L}C]}ER{I|L}{I|L}RE{I|L}Y;[TP]{M(Oxidation (M))|F}R{I|L}{I|L}RE{I|L}Y;EWW{I|L}{I|L}RE{I|L}Y;{[TV]|[{I|L}S]}[WD]{I|L}{I|L}RE{I|L}Y;{[ES]|[DT]|[{I|L}C]}ER{I|L}{I|L}WV{I|L}Y;[TP]{M(Oxidation (M))|F}[VG]{I|L}{I|L}RE{I|L}Y;[TP]{I|L}[CS]{I|L}{I|L}RE{I|L}Y;{[ES]|[DT]|[{I|L}C]}ER[HK]{M(Oxidation (M))|F}V{I|L}Y;{[TV]|[{I|L}S]}[WD]{I|L}{I|L}WV{I|L}Y 5.5131;4.2934;4.1196;3.8501;3.5294;3.4334;3.4183;3.3021;2.7271;2.1106 +;+;-;-;-;-;-;-;-;- + 158 + 1 2.179 102150.9 1.0 4099 3507 7601 DOHH2_400M_050219_1,7608 DOHH2_400M_050219_1,7608,ESERLLRELY True True ESERLLRELY 42.5374 654.352221667767 3931344.75 7601.0 nc|ENSG00000070669|P08243-2|ASNS;;nc|ENSG00000070669|P08243-3|ASNS;;ENSG00000070669|ENST00000394308|ASNS 6.381238619486491 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7609 42.551 800.0 202710.0 25 0 12157.0 25469 NEIWHRRHDYW 11 137 806.3816016406637 1610.7486503481273 2 806.3816406130791 MULTI CID FTMS 0 0 0 7601 158032.53125 0.5399976209117162 -1 0.0807876586914062 8 Unmodified _NEIWHRRHDYW_ ENSG00000170004|ENST00000330494|CHD3;ENST00000470531.5_3_17:7807732-7814900:+|nuORF;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3 4.189502756095605 0.855381588458882 1 GGPGG{M(Oxidation (M))|F}GPGGYP{I|L}NHEV 17 16 + 119.2 0.0 0.0 7.4001 7.4001 83.487 0.0 0.0 0.0 3.716110699496895 9.524856768912684 3.716110699496895 2.021410739689898 0 3.632576888900239 0.0 1.329689690656103 0.0 GGPGG{M(Oxidation (M))|F}GPGGYP{I|L}NHEV;GGPGG{M(Oxidation (M))|F}GPGGYPG{[VA]|[{I|L}G]}HEV;GGPGG{M(Oxidation (M))|F}GPNYP{I|L}NHEV;GGPGG{M(Oxidation (M))|F}GPNYPG{[VA]|[{I|L}G]}HEV;GGPGG{M(Oxidation (M))|F}GPGGYV{M(Oxidation (M))|F}TD{I|L}N;GGPN{M(Oxidation (M))|F}GPGGYP{I|L}NHEV;GGPN{M(Oxidation (M))|F}GPGGYPG{[VA]|[{I|L}G]}HEV;GGPGG{M(Oxidation (M))|F}GPGGYV{M(Oxidation (M))|F}[KS]EV;GGPGG{M(Oxidation (M))|F}GPNYV{M(Oxidation (M))|F}TD{I|L}N;GGPN{M(Oxidation (M))|F}GPNYP{I|L}NHEV 7.4001;7.2746;6.9991;6.8727;6.8088;6.7188;6.5924;6.5281;6.4078;6.3189 -;-;-;-;-;-;-;-;-;- 128849 + 1 2.179 115691.6 0.6899999976158142 4100 3507 7601 DOHH2_400M_050219_1,7609 DOHH2_400M_050219_1,7609,NEIWHRRHDYW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7610 42.565 800.0 138680.0 25 0 7653.3 -1 GLCLISLRVF 10 143 589.3433237487886 0 589.3337890505791 PEAK CID FTMS 0 0 0 -1 0 9 Carbamidomethyl (C) _GLC(Carbamidomethyl (C))LISLRVF_ ENST00000394906.6_1_17:27207287-27207452:-|nuORF 12.240655878213236 0.3578162629684178 1 VK{I|L} 3 -1 16.198 0.0 0.0 1.3766 0.0 0.0 165.09836358526042 668.3006685846311 833.3990321698916 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VK{I|L} 1.3766 - 216 + 1 2.179 87584.6 0.5600000023841858 4101 3507 7601 DOHH2_400M_050219_1,7610 DOHH2_400M_050219_1,7610,GLCLISLRVF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7611 42.573 428.0 150720.0 25 0 8314.5 + 14266 ELWGKSSL 8 99 460.25507622606295 0 460.2489196658134 PEAK CID FTMS 0 0 0 -1 0 10 Unmodified _IEGFRNAL_ nc|ENSG00000104299|Q9NV88-2|INTS9;nc|ENSG00000104299|Q9NV88-3|INTS9;ENSG00000104299|ENST00000521022|INTS9 19.438996006549623 0.4285751805470146 1 D 1 8 10.797 0.0 0.0 1.1755 0.0 0.0 704.362983407401 96.08270441226796 800.4456878196689 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 D 1.1755 - 28 + 1 2.179 55479.6 1.0 4102 3507 7601 DOHH2_400M_050219_1,7611 DOHH2_400M_050219_1,7611,IEGFRNAL False False ELWGKSSL 42.572691 460.248919665813 609742.5625 7601.0 nc|ENSG00000104299|Q9NV88-2|INTS9;;nc|ENSG00000104299|Q9NV88-3|INTS9;;ENSG00000104299|ENST00000521022|INTS9 2.1442249367634454 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7612 42.574 72.0 624700.0 25 0 56069.0 + 8909 FAHPYQYEL 9 76 584.2773367059956 1166.540120478791 2 584.2769653201103 MULTI CID FTMS 0 0 0 7601 476775.4375 0.9071979366272566 -1 0.0807876586914062 11 Unmodified _FAHPYQYEL_ ENSG00000171824|ENST00000376936|EXOSC10;nc|ENSG00000171824|Q01780-2|EXOSC10 12.531546534597751 0.4974689918368763 1 QYE{I|L} 4 5 17.875 0.0 0.0 1.5323 0.0 0.0 615.2800160138687 0.0 615.2800160138687 0.0 2.129843661361406 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.0 + QYE{I|L} 1.5323 + + 26 1 2.179 41160.6 1.0 4103 3507 7601 DOHH2_400M_050219_1,7612 DOHH2_400M_050219_1,7612,FAHPYQYEL False True FAHPYQYEL 42.574385 584.27696532011 3631041.25 7601.0 ENSG00000171824|ENST00000376936|EXOSC10;;nc|ENSG00000171824|Q01780-2|EXOSC10 6.092440923055013 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7613 42.589 800.0 543020.0 25 0 52009.0 + 26372 NSYWVGEDSTY 11 174 660.7724626975378 1319.5303724618757 2 660.7734252810478 MULTI CID FTMS 0 0 0 7601 216651.046875 0.2358189570340671 -1 0.0807876586914062 12 Unmodified _NSYWVGEDSTY_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 128.57297698046145 0.0503931262756423 1 [NS]YWVGED 8 3 79.438 0.0 0.0 6.0202 0.0 0.0 0.0 366.1279426125192 366.1279426125192 37.43552648198917 0.0 0.0 0.0 0 1.079689690656103 1.2218487496163564 1.23239816956497 1.825954603207869 + [NS]YWVGED 6.0202 + + 12484 1 2.179 307956.6 0.8399999737739563 4104 3507 7601 DOHH2_400M_050219_1,7613 DOHH2_400M_050219_1,7613,NSYWVGEDSTY True True NSYWVGEDSTY 42.589393 660.773425281048 15187881.0 7601.0 ENST00000490223.1_1_3:23959920-23960989:+|nuORF;;ENSG00000174748|ENST00000307839|RPL15;;ENST00000436146.1_1_3:23959450-23960989:+|nuORF 8.356245676676432 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7614 42.6 622.0 152370.0 25 0 18000.0 + 25749 NIPPLTQTPV 10 129 540.3086082259989 0 540.3077880740166 PEAK CID FTMS 0 0 0 7601 142826.40625 0.9982137644643636 -1 0.0807876586914062 13 Unmodified _NIPPLTQTPV_ CON__P02666 31.26834338654808 0.2038683672476779 1 {I|L}NTQT 5 6 39.112 0.0 0.0 3.6262 0.0 0.0 214.13313334477272 304.1671236627563 518.300257007529 0.0 0.0 0.0 0.0 0 0.5 0.0 1.1549471895720984 0.0 {I|L}NTQT 3.6262 - 569 + 1 2.179 78932.4 1.0 4105 3507 7601 DOHH2_400M_050219_1,7614 DOHH2_400M_050219_1,7614,NIPPLTQTPV False True False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 7615 42.614 800.0 114820.0 25 0 7439.9 24370 MEVEVDGQKF 10 143 591.278803124063 1180.5430533149258 2 592.2731201052666 MULTI CID FTMS 0 0 0 -1 0 14 Unmodified _MEVEVDGQKF_ ENSG00000129351|ENST00000588657|ILF3;ENSG00000165209|ENST00000348403|STRBP;ENST00000492885.1_1_9:125898316-125898746:-|nuORF;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3;nc|ENSG00000165209|Q96SI9-2|STRBP 8.155526934196011 0.6889124077178598 1 W 1 10 11.99 0.0 0.0 1.0156 0.0 0.0 976.4526582727368 0.0 976.4526582727368 0.0 -1.1978875828839364 -1.1978875828839364 0.0 0 0.0 0.0 0.0 0.0 W 1.0156 - 111 + 1 2.179 75732.6 0.6499999761581421 4106 3507 7601 DOHH2_400M_050219_1,7615 DOHH2_400M_050219_1,7615,MEVEVDGQKF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7617 42.619 58.0 752040.0 25 0 84637.0 + 35664 SVDPHGFISY 10 73 561.2666233727552 1120.5186938123104 2 561.2670776247978 MULTI CID FTMS 0 0 0 7616 774207.0 0.0272148321251631 4 -0.4647483825683594 1 Unmodified _SVDPHGFISY_ ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;nc|ENSG00000105197|Q3ZCQ8-3|TIMM50 53.832793166522166 0.0576554960245129 1 [WD]P[NG]{I|L}G{I|L}SY 10 5 + 45.78 0.0 0.0 4.0856 4.0856 83.116 0.0 0.0 0.0 12.41741768247484 13.819459175083612 12.41741768247484 12.302046884880935 0 1.1989700043360187 0.0 0.7134679910804405 0.0 [WD]P[NG]{I|L}G{I|L}SY;[HM][DV]S{I|L}G{I|L}SY;[VS][WY]G{M(Oxidation (M))|F}{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}S[DV]SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}[NG]P[WP];[WD]P[NG]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;[HM][VS]D{I|L}G{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}[HM][WP];[HM][DV]S{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;[WD][HM]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y 4.0856;2.9877;2.8106;2.5718;2.5604;2.5147;2.4504;2.2461;2.2421;2.2052 -;-;-;-;-;-;-;-;-;- 353 + 1 2.154 38639.0 1.0 4107 3508 7616 DOHH2_400M_050219_1,7617 DOHH2_400M_050219_1,7617,SVDPHGFISY True True SVDPHGFISY 42.618939 561.267077624798 498826656.0 7616.0 nc|ENSG00000105197|Q3ZCQ8-3|TIMM50;;ENSG00000105197|ENST00000607714|TIMM50;;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50 7.863821983337402 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7618 42.62 44.0 1091700.0 25 0 241850.0 43407 WQTKPKLT 8 75 501.29037773353184 1000.5662025338636 2 501.2906677126884 MULTI CID FTMS 0 0 0 7616 1402688.75 0.5258170481622965 6 -0.6685028076171875 2 Unmodified _WQTKPKLT_ ENSG00000087365|ENST00000322535|SF3B2 0.7936320650641473 0.8195151834710337 1 Y 1 8 2.7642 0.0 0.0 0.27626 0.0 0.0 639.4088061489012 195.0667971246704 834.4756032735716 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.27626 - 1 + 1 2.154 42564.5 1.0 4108 3508 7616 DOHH2_400M_050219_1,7618 DOHH2_400M_050219_1,7618,WQTKPKLT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7619 42.622 57.0 952090.0 25 0 48988.0 + 32999 SENLLGKQF 9 92 518.2766529090493 1034.5387528848985 2 518.2773315310478 MULTI CID FTMS 0 0 0 7616 842926.8125 1.0 0 0.0 3 Unmodified _SENLLGKQF_ chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;nc|ENSG00000148773|P46013-2|MKI67 62.57269311338072 0.0246576765497938 1 {[ES]|[DT]|[{I|L}C]}N{I|L}{I|L}GKQ{M(Oxidation (M))|F} 9 0 + 62.061 0.0 0.0 5.9989 5.9989 88.021 0.0 0.0 0.0 46.37492705584647 12.98332479720628 12.98332479720628 9.208187539523747 0 1.424742501084005 0.0 0.0 1.0189301784845295 + + {[ES]|[DT]|[{I|L}C]}N{I|L}{I|L}GKQ{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GG{I|L}{I|L}GKQ{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}N{I|L}{I|L}GK[AG]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GG{I|L}{I|L}GK[AG]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}N{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[TV]|[{I|L}S]};{[ES]|[DT]|[{I|L}C]}GG{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[TV]|[{I|L}S]} 5.9989;5.1089;4.8136;3.9277;3.0313;2.1413 +;-;-;-;-;- + 244 + 1 2.154 45408.8 1.0 4109 3508 7616 DOHH2_400M_050219_1,7619 DOHH2_400M_050219_1,7619,SENLLGKQF True True SENLLGKQF 42.621587 518.277331531048 5176764.5 7616.0 nc|ENSG00000148773|P46013-2|MKI67;;ENSG00000148773|ENST00000368654|MKI67;;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67 6.825394630432129 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7620 42.624 106.0 574360.0 25 0 80510.0 + -1 TEIGPRMTL 9 87 509.8028392162623 1017.5911254993248 2 509.8036987185478 MULTI CID FTMS 0 0 0 7616 592341.4375 0.6677250969799192 7 -0.7941741943359375 4 Oxidation (M) _M(Oxidation (M))VKISKLPS_ nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN;ENSG00000130810|ENST00000253107|PPAN 4.3292370932331545 0.7635526921153418 1 G{I|L}VN 4 -1 13.36 0.0 0.0 1.3129 0.0 0.0 616.3370838849625 0.0 616.3370838849625 0.0 2.902215944156905 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.0 G{I|L}VN 1.3129 - 22 1 2.154 51559.0 1.0 4110 3508 7616 DOHH2_400M_050219_1,7620 DOHH2_400M_050219_1,7620,MVKISKLPS False False TEIGPRMTL 42.623839 509.803698718548 3536293.25 7616.0 nc|ENSG00000130810|Q9NQ55-2|PPAN;;nc|ENSG00000130810|Q9NQ55-3|PPAN;;ENSG00000130810|ENST00000253107|PPAN 1.9099541554848356 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7621 42.626 94.0 507760.0 25 0 28133.0 -1 RCHRRRRRCCC 11 59 866.9070431313726 1731.799533329545 2 867.4001953005791 MULTI CID FTMS 0 0 0 7616 575115.3125 0.0543177353214738 9 -0.9803009033203124 5 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 1 [NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAD{I|L}NP[EP] 15 -1 + 58.368 0.0 0.0 3.3703 3.3703 69.49 0.0 0.0 0.0 19.836095838118304 35.40870903282446 19.836095838118304 1.0720996964786875 0 0.0 1.2218487496163564 0.0 0.3807196863200844 [NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAD{I|L}NP[EP];[NP]{I|L}DA[QP]{[QN]|[E{I|L}]|[KN]}AD{I|L}NP[EP];[NP]{I|L}N[HS]{[TV]|[{I|L}S]}DAD{I|L}NP[EP];[NP]{I|L}DA[QP]{[QN]|[E{I|L}]|[KN]}ANNNP[EP];[NP]{I|L}N[HS]{[TV]|[{I|L}S]}DANNNP[EP];[NP]{I|L}[{M(Oxidation (M))|F}E][YV]WD{I|L}NP[EP];[NP]{I|L}[{M(Oxidation (M))|F}E][YV]DW{I|L}NP[EP];[NP]{I|L}[{M(Oxidation (M))|F}E][YV]WNNNP[EP];[NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAD{I|L}NV[HS];[NP]{I|L}W[QP]{[QN]|[E{I|L}]|[KN]}ANNNP[EP] 3.3703;3.3084;3.1803;3.1346;3.0065;2.984;2.984;2.8102;2.8028;2.7472 -;-;-;-;-;-;-;-;-;- 616 1 2.154 41084.9 1.0 4111 3508 7616 DOHH2_400M_050219_1,7621 DOHH2_400M_050219_1,7621,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7622 42.629 145.0 337090.0 25 0 38809.0 + 6828 EEATFQQIY 9 85 564.7632421627732 1127.5119313923462 2 564.7643310427666 MULTI CID FTMS 0 0 0 7616 422468.6875 1.0 0 0.0 6 Unmodified _EEATFQQIY_ ENSG00000085840|ENST00000371568|ORC1 64.23631603340823 0.0237365939569086 1 [AG]{M(Oxidation (M))|F}Q{[CA]|SS}QQ[Y{I|L}] 10 6 + 38.636 0.0 0.0 3.4266 3.4266 71.537 0.0 0.0 0.0 2.434461232626745 2.434461232626745 2.434461232626745 2.434461232626745 0 0.4247425010840047 1.3010299956639813 1.3807196863200843 0.0 [AG]{M(Oxidation (M))|F}Q{[CA]|SS}QQ[Y{I|L}];EE[PG]{M(Oxidation (M))|F}QQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[AG]Q{M(Oxidation (M))|F}{[CA]|SS}QQ[Y{I|L}];[AG]{M(Oxidation (M))|F}QT[NS]Q[Y{I|L}];EE[YR]QQ[Y{I|L}];EEA{[ET]|[MV]}QQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{[CA]|SS}QQ[Y{I|L}];[AG]Q{M(Oxidation (M))|F}T[NS]Q[Y{I|L}];[DP]AE{M(Oxidation (M))|F}QQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[AG]{M(Oxidation (M))|F}Q{[CA]|SS}Q[AG][Y{I|L}] 3.4266;3.2107;3.0776;2.9832;2.7509;2.7485;2.6505;2.6342;2.632;2.6138 -;-;-;-;-;-;-;-;-;- 561 1 2.154 43712.0 1.0 4112 3508 7616 DOHH2_400M_050219_1,7622 DOHH2_400M_050219_1,7622,EEATFQQIY True True EEATFQQIY 42.628828 564.764331042767 2169288.75 7616.0 ENSG00000085840|ENST00000371568|ORC1 3.1096812089284263 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7623 42.632 148.0 454620.0 25 0 55709.0 23540 LTLLIFYY 8 105 523.3034874834204 1044.5924220336408 2 523.3049804568291 MULTI CID FTMS 0 0 0 7616 230339.375 0.0809339207388991 -4 0.3783760070800781 7 Unmodified _LTLLIFYY_ ENSG00000186815|ENST00000335509|TPCN1;ENST00000551127.5_1_12:113726380-113729792:+|nuORF;ENST00000552077.5_1_12:113726380-113733878:+|nuORF;nc|ENSG00000186815|Q9ULQ1-3|TPCN1 5.760428011301431 0.7893668129297577 1 Y 1 7 12.474 0.0 0.0 1.1942 0.0 0.0 863.5181402727018 0.0 863.5181402727018 0.0 1.6367946719316515 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1942 + + 29 + 1 2.154 57082.3 1.0 4113 3508 7616 DOHH2_400M_050219_1,7623 DOHH2_400M_050219_1,7623,LTLLIFYY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7624 42.638 314.0 332600.0 25 0 44514.0 + 33826 SLDVGGPLRY 10 97 538.790140766421 1075.565728599642 2 538.7916747927666 MULTI CID FTMS 0 0 0 7616 171313.71875 0.0348370676472322 -2 0.1883964538574218 8 Unmodified _SLDVGGPLRY_ ENSG00000176894|ENST00000317479|PXMP2 38.17557092003332 0.1768326257063233 1 {[TV]|[{I|L}S]}DVGG[{I|L}P]RY 10 0 + 66.476 0.0 0.0 6.1806 6.1806 85.352 0.0 0.0 0.0 53.3771376077312 8.812281309285623 8.812281309285623 6.53212513775344 0 0.9247425010840048 2.0 0.0 0.2614393726401688 + + {[TV]|[{I|L}S]}DVGG[{I|L}P]RY;{[TV]|[{I|L}S]}DVN[{I|L}P]RY;{[TV]|[{I|L}S]}DV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG]T{I|L};{[TV]|[{I|L}S]}DV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[TV]|[{I|L}S]}[PA];{[TV]|[{I|L}S]}DV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[TA][VP] 6.1806;5.5732;3.8945;3.4066;2.7568 +;-;-;-;- + 285 + 1 2.154 84648.4 1.0 4114 3508 7616 DOHH2_400M_050219_1,7624 DOHH2_400M_050219_1,7624,SLDVGGPLRY False True SLDVGGPLRY 42.637526 538.791674792767 60220544.0 7616.0 ENSG00000176894|ENST00000317479|PXMP2 6.831630071004232 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7625 42.651 800.0 146170.0 25 0 7483.7 + 10412 FTAKSPLMY 9 168 529.2726988436513 1056.5308447541024 2 529.2728759646416 MULTI CID FTMS 0 0 0 7616 141037.5 1.0 0 0.0 9 Unmodified _FTAKSPLMY_ ENSG00000115365|ENST00000450366|LANCL1 38.17557092003332 0.0854718145212029 1 [{M(Oxidation (M))|F}T][KA]SP{I|L}MY 9 0 [{M(Oxidation (M))|F}T][KA]SP{I|L} + + 25.969 9.9011 1.33 2.458 2.458 49.436 0.0 0.0 0.0 0.0 7.463376053630974 0.0 0.0 0 0.5 0.0 0.0 0.0 + + [{M(Oxidation (M))|F}T][KA]SP{I|L}MY 2.458 + + 385 + 1 2.154 91639.7 0.7200000286102295 4115 3508 7616 DOHH2_400M_050219_1,7625 DOHH2_400M_050219_1,7625,FTAKSPLMY True True FTAKSPLMY 42.651358 529.272875964642 1222550.25 7616.0 ENSG00000115365|ENST00000450366|LANCL1 4.214468320210774 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7626 42.665 784.0 147630.0 25 0 7915.2 + 6170 DTDHYFLRY 9 146 410.52440333562856 1228.5513806070858 3 410.5242797732353 MULTI CID FTMS 0 0 0 7616 120059.25 0.1150903741520991 2 -0.2638359069824219 10 Unmodified _DTDHYFLRY_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 21.59015148037692 0.2564810811560323 1 {[ES]|[DT]|[{I|L}C]}DHY{M(Oxidation (M))|F}{I|L}RY 9 0 + 44.443 0.0 0.0 3.6175 3.6175 78.018 0.0 0.0 0.0 7.147642715192504 8.57896081485488 7.147642715192504 8.57896081485488 0 0.0 0.0 0.0 0.3252574989159953 + + {[ES]|[DT]|[{I|L}C]}DHY{M(Oxidation (M))|F}{I|L}RY;{[ES]|[DT]|[{I|L}C]}DHY{M(Oxidation (M))|F}Y[R{I|L}];{[ES]|[DT]|[{I|L}C]}DHY{M(Oxidation (M))|F}[HV]VP;{[ES]|[DT]|[{I|L}C]}DHY{M(Oxidation (M))|F}[HV]PV 3.6175;2.9192;1.4426;1.3207 +;-;-;- + 141 + 1 2.154 93323.6 1.0 4116 3508 7616 DOHH2_400M_050219_1,7626 DOHH2_400M_050219_1,7626,DTDHYFLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7627 42.679 800.0 304820.0 25 0 25868.0 + 24371 MEVEVDGQKF 10 185 591.278803124063 1180.5430533149258 2 591.2802612185478 MULTI CID FTMS 0 0 0 7616 87775.890625 0.1858277294924032 -1 0.1076087951660156 11 Unmodified _MEVEVDGQKF_ ENSG00000129351|ENST00000588657|ILF3;ENSG00000165209|ENST00000348403|STRBP;ENST00000492885.1_1_9:125898316-125898746:-|nuORF;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3;nc|ENSG00000165209|Q96SI9-2|STRBP 114.20165948288296 0.0011420412450596 1 MEVEVD{[QG]|[NA]}K{M(Oxidation (M))|F} 10 0 + 118.86 0.0 0.0 10.069 10.069 90.99 0.0 0.0 0.0 30.02343399603923 6.600519383056493 6.600519383056493 6.600519383056493 0 1.424742501084005 1.6989700043360187 1.4876954943324543 2.00552339309072 + + MEVEVD{[QG]|[NA]}K{M(Oxidation (M))|F};MEVEVD{[QG]|[NA]}{M(Oxidation (M))|F}K;MEVEVTV[C(Carbamidomethyl (C))S]K;MEVDD{I|L}{[QG]|[NA]}K{M(Oxidation (M))|F};MEV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{M(Oxidation (M))|F};MEVETVV[C(Carbamidomethyl (C))S]K;MEVDD{I|L}{[QG]|[NA]}{M(Oxidation (M))|F}K;MEV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}K;MEVET[{I|L}P]{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F};MEV{M(Oxidation (M))|F}[RH]{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F} 10.069;9.5095;7.3547;6.7679;6.6657;6.4633;6.2088;6.1066;5.9165;5.3844 +;-;-;-;-;-;-;-;-;- + 4725 + 1 2.154 181425.9 0.6399999856948853 4117 3508 7616 DOHH2_400M_050219_1,7627 DOHH2_400M_050219_1,7627,MEVEVDGQKF True True MEVEVDGQKF 42.678737 591.280261218548 2396382.25 7616.0 ENSG00000165209|ENST00000348403|STRBP;;ENSG00000129351|ENST00000588657|ILF3;;nc|ENSG00000129351|Q12906-4|ILF3;;ENST00000492885.1_1_9:125898316-125898746:-|nuORF;;nc|ENSG00000129351|Q12906-2|ILF3;;nc|ENSG00000129351|Q12906|ILF3;;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;;nc|ENSG00000129351|Q12906-5|ILF3;;nc|ENSG00000129351|Q12906-3|ILF3;;nc|ENSG00000129351|Q12906-6|ILF3;;nc|ENSG00000165209|Q96SI9-2|STRBP 7.15072774887085 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7628 42.693 800.0 283250.0 25 0 34108.0 + 41816 VPWLKREL 8 175 520.8165158273837 1039.6184787215673 2 520.8163940310478 MULTI CID FTMS 0 0 0 7616 90211.5390625 0.3437670773425812 -1 0.1076087951660156 12 Unmodified _VPWLKREL_ ENSG00000197579|ENST00000360538|TOPORS;nc|ENSG00000197579|Q9NS56-2|TOPORS 36.506200033944 0.2927422953263032 1 VPW{I|L}K{[RE]|[WV]}{I|L} 8 0 + 68.649 0.0 0.0 6.6033 6.6033 85.505 0.0 0.0 0.0 43.956159074994986 2.9369094600919965 2.9369094600919965 5.406818243744255 0 0.9258337024346172 2.0 0.3807196863200844 0.0 + + VPW{I|L}K{[RE]|[WV]}{I|L};VP{I|L}WK{[RE]|[WV]}{I|L};VPW{I|L}K[{I|L}V]W;VP{I|L}WK[{I|L}V]W;V{I|L}PWK{[RE]|[WV]}{I|L};V{I|L}PWK[{I|L}V]W;{I|L}VPWK{[RE]|[WV]}{I|L};{I|L}VPWK[{I|L}V]W;{[CT]|[{M(Oxidation (M))|F}G]}[{I|L}V]K{I|L}[HQ]V 6.6033;6.0832;5.9967;5.4766;3.4613;2.8547;2.8055;2.5652;0.80047 +;-;-;-;-;-;-;-;- + 425 + 1 2.154 177033.3 0.5899999737739563 4118 3508 7616 DOHH2_400M_050219_1,7628 DOHH2_400M_050219_1,7628,VPWLKREL False True VPWLKREL 42.692568 520.816394031048 1990271.875 7616.0 ENSG00000197579|ENST00000360538|TOPORS;;nc|ENSG00000197579|Q9NS56-2|TOPORS 5.789780775705974 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7629 42.698 237.0 200420.0 25 0 29341.0 40505 VISSPQLHL 9 80 497.2893621996139 0 497.2893249392509 PEAK CID FTMS 0 0 0 7616 383123.8125 1.0 0 0.0 13 Unmodified _VISSPQLHL_ ENSG00000128815|ENST00000325239|WDFY4;ENST00000374161.7_3_10:50011336-50031259:+|nuORF;nc|ENSG00000128815|Q6ZS81-4|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4 8.593279151180031 0.3284076903191179 1 VSVM{M(Oxidation (M))|F} 5 7 19.781 0.0 0.0 1.9929 0.0 0.0 344.23911150684654 82.06707178287343 426.30618328972 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 VSVM{M(Oxidation (M))|F} 1.9929 - 31 + 1 2.154 42410.6 1.0 4119 3508 7616 DOHH2_400M_050219_1,7629 DOHH2_400M_050219_1,7629,VISSPQLHL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7630 42.702 163.0 352640.0 25 0 50846.0 + 34132 SLLSKHLL 8 99 455.78983912309263 909.5651253129852 2 455.7894775271416 MULTI CID FTMS 0 0 0 7616 263841.34375 1.0 0 0.0 14 Unmodified _SLLSKHLL_ ENSG00000093009|ENST00000263201|CDC45;nc|ENSG00000093009|O75419-2|CDC45;nc|ENSG00000093009|O75419-3|CDC45 28.486842064014134 0.4448922141344407 1 {[TV]|[{I|L}S]}{I|L}SKH{I|L}{I|L} 8 0 + 54.551 0.0 0.0 5.9974 5.9974 93.189 0.0 0.0 0.0 21.040397206915173 7.678512937438313 7.678512937438313 54.55050056684961 0 0.4247425010840047 2.0 0.5 0.0 + + {[TV]|[{I|L}S]}{I|L}SKH{I|L}{I|L} 5.9974 + + 116 + 1 2.154 47514.6 1.0 4120 3508 7616 DOHH2_400M_050219_1,7630 DOHH2_400M_050219_1,7630,SLLSKHLL False True SLLSKHLL 42.701672 455.789477527142 1571563.625 7616.0 ENSG00000093009|ENST00000263201|CDC45;;nc|ENSG00000093009|O75419-2|CDC45;;nc|ENSG00000093009|O75419-3|CDC45 2.2545902729034424 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7631 42.716 800.0 168310.0 25 0 9290.9 + 6172 DTDHYFLRY 9 113 615.2828031280435 1228.551053322887 2 615.2824584841728 MULTI CID FTMS 0 0 0 7616 216641.109375 0.1540679104495523 2 -0.2638359069824219 15 Unmodified _DTDHYFLRY_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 53.31671820480216 0.0330978755772958 1 {[ES]|[DT]|[{I|L}C]}DHY{M(Oxidation (M))|F}{I|L}RY 9 0 + 49.299 0.0 0.0 4.0127 4.0127 85.151 0.0 0.0 0.0 36.07681238396784 11.962724883926654 11.962724883926654 25.926003480513486 0 1.7544321917401078 0.0 0.0 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}DHY{M(Oxidation (M))|F}{I|L}RY;[HD]{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}{I|L}RY 4.0127;1.9025 +;- + 145 + 1 2.154 101750.9 0.8899999856948853 4121 3508 7616 DOHH2_400M_050219_1,7631 DOHH2_400M_050219_1,7631,DTDHYFLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7632 42.729 800.0 123950.0 25 0 14020.0 + 6792 EEALILDNKY 10 150 604.3150479714423 1206.6155430096844 2 604.3157836794853 MULTI CID FTMS 0 0 0 7616 178492.4375 1.0 0 0.0 16 Unmodified _EEALILDNKY_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 57.24910588100465 0.0438022649904578 1 EEA{I|L}{I|L}{I|L}NDKY 10 2 + 52.948 0.0 0.0 4.3881 4.3881 77.405 0.0 0.0 0.0 35.74666648861597 3.309932190414244 3.309932190414244 4.771212547196626 0 1.086696871556164 1.3979400086720375 0.0 0.0 EEA{I|L}{I|L}{I|L}NDKY;EEA{I|L}{I|L}{I|L}DNKY;EEA{I|L}{I|L}{I|L}GGDKY;EEA{I|L}{I|L}{[HG]|PP}Y{I|L}Y;EEA{I|L}{I|L}{I|L}DGGKY;EEA{I|L}{I|L}{I|L}N{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F};[H{I|L}]{[CA]|SS}N{I|L}{I|L}{I|L}A[HC];EEA{I|L}{I|L}{I|L}N{[MG]|[TS]}A{M(Oxidation (M))|F};EEAK{[HG]|PP}{I|L}{I|L}A[HC];EEA{I|L}{I|L}{[HG]|PP}YY{I|L} 4.3881;3.9927;3.6286;3.2427;3.2332;2.9675;2.4831;2.4342;2.397;2.2229 -;+;-;-;-;-;-;-;-;- + 1189 + 1 2.154 71682.0 0.7900000214576721 4122 3508 7616 DOHH2_400M_050219_1,7632 DOHH2_400M_050219_1,7632,EEALILDNKY True True EEALILDNKY 42.729342 604.315783679485 661167.8125 7616.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 5.998758633931478 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7633 42.744 800.0 85516.0 25 0 11149.0 -1 0 76 1037.7910981787493 0 1037.460131824017 PEAK CID FTMS 0 0 0 7616 114558.75 1.0 0 0.0 17 1 SYD 3 -1 16.101 0.0 0.0 0.77648 0.0 0.0 1407.3142387385549 298.1052340143188 1705.4194727528736 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 SYD 0.77648 - 699 + 1 2.154 49303.4 0.6299999952316284 4123 3508 7616 DOHH2_400M_050219_1,7633 DOHH2_400M_050219_1,7633, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7634 42.758 800.0 35745.0 25 0 11563.0 -1 0 42 1142.202197253704 0 1142.202197253704 PEAK CID FTMS 0 0 0 -1 0 18 1 {I|L} 1 -1 6.9897 0.0 0.0 0.30624 0.0 0.0 1537.0258411853397 629.2574556940061 2166.283296879345 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.30624 - 5 + 1 2.154 27020.3 0.5899999737739563 4124 3508 7616 DOHH2_400M_050219_1,7634 DOHH2_400M_050219_1,7634, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7635 42.765 402.0 278010.0 25 0 46264.0 + 25607 KEIIPTSEF 9 126 531.8168122278975 1061.6190715225948 2 531.8174926638603 MULTI CID FTMS 0 0 0 7616 83358.59375 0.0838082301427301 -4 0.3783760070800781 19 Unmodified _NFLRLSSLI_ nc|ENSG00000153827|Q14669-2|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12 3.5964929083625545 0.7891324200061827 1 {M(Oxidation (M))|F} 1 8 11.99 0.0 0.0 1.1294 0.0 0.0 896.539723843687 0.0 896.539723843687 0.0 1.2763625255165325 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.1294 + + 47 + 1 2.154 92103.8 1.0 4125 3508 7616 DOHH2_400M_050219_1,7635 DOHH2_400M_050219_1,7635,NFLRLSSLI False False KEIIPTSEF 42.765442 531.81749266386 402847.09375 7616.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12 0.0310975710550944 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7637 42.771 100.0 528040.0 25 0 63661.0 -1 0 56 1031.4509768166308 3091.331101050093 3 1031.785815417767 MULTI CID FTMS 0 0 0 7636 749690.75 0.3476727101264462 1 -0.1123847961425781 1 1 SYD 3 -1 17.307 0.0 0.0 0.55986 0.0 0.0 2425.0808701924743 298.1048372858032 2723.185707478277 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 SYD 0.55986 - 398 + 1 2.135 43756.4 1.0 4126 3509 7636 DOHH2_400M_050219_1,7637 DOHH2_400M_050219_1,7637, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7638 42.773 76.0 389420.0 25 0 55942.0 + 6028 DSDMQTLVY 9 63 536.2364581500514 1070.4583633669026 2 536.2369872927666 MULTI CID FTMS 0 0 0 7636 458292.3125 0.2843306477192444 1 -0.1123847961425781 2 Unmodified _DSDMQTLVY_ ENSG00000149823|ENST00000279281|VPS51 21.74664581756881 0.2544899275067181 1 VY 2 7 18.583 0.0 0.0 1.736 0.0 0.0 790.3163478413152 0.0 790.3163478413152 0.0 11.136218907515312 0.0 0.0 0 0.0 0.0 0.0 0.0 + VY 1.736 + + 11 + 1 2.135 29570.4 1.0 4127 3509 7636 DOHH2_400M_050219_1,7638 DOHH2_400M_050219_1,7638,DSDMQTLVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7639 42.774 32.0 2371000.0 25 0 126630.0 + 7915 ELQKRFIL 8 108 523.8219135321078 1045.6292741310156 2 523.8218871951103 MULTI CID FTMS 0 0 0 7636 1273595.0 1.0 0 0.0 3 Unmodified _ELQKRFIL_ ENSG00000126067|ENST00000373237|PSMB2 50.855029805455786 0.1352255786796883 1 E{I|L}QK 4 4 51.81 0.0 0.0 4.9549 0.0 0.0 0.0 544.3261812799436 544.3261812799436 33.750612633917 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.4247425010840047 + E{I|L}QK 4.9549 + + 110 + 1 2.135 61198.0 1.0 4128 3509 7636 DOHH2_400M_050219_1,7639 DOHH2_400M_050219_1,7639,ELQKRFIL False True ELQKRFIL 42.774065 523.82188719511 7212680.5 7636.0 ENSG00000126067|ENST00000373237|PSMB2 1.5877148906389873 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7640 42.775 48.0 925940.0 25 0 202310.0 24372 MEWKVKIR 8 64 545.3164559011491 1088.618358869098 2 545.3166992068291 MULTI CID FTMS 0 0 0 7636 1103218.625 1.0 0 0.0 4 Unmodified _MEWKVKIR_ ENSG00000121440|ENST00000263666|PDZRN3;ENSG00000165966|ENST00000402685|PDZRN4;ENST00000548316.1_1_12:41903559-41967689:+|nuORF;nc|ENSG00000165966|Q6ZMN7-2|PDZRN4;nc|ENSG00000165966|Q6ZMN7-4|PDZRN4 2.577480529830294 0.808687252328423 1 E 1 7 6.9897 0.0 0.0 0.64207 0.0 0.0 130.11574764038556 826.4421480768186 956.5578957172042 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.64207 + + 4 + 1 2.135 43121.7 1.0 4129 3509 7636 DOHH2_400M_050219_1,7640 DOHH2_400M_050219_1,7640,MEWKVKIR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7641 42.777 40.0 1325600.0 25 0 113420.0 + -1 VMAPRTVLL 9 87 508.3002017309569 1014.585850528714 2 508.3023864626884 MULTI CID FTMS 0 0 0 7636 1003757.9375 1.0 0 0.0 5 Oxidation (M) _VM(Oxidation (M))APRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;ENST00000498007.1_1_6:31324459-31324935:-|nuORF 26.268140514670165 0.1969607489560049 1 {I|L}{I|L} 2 -1 23.94 0.0 0.0 2.3596 0.0 0.0 770.4063136408217 0.0 770.4063136408217 0.0 4.987737688117232 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}{I|L} 2.3596 + + 69 + 1 2.135 47297.1 1.0 4130 3509 7636 DOHH2_400M_050219_1,7641 DOHH2_400M_050219_1,7641,VMAPRTVLL False False VMAPRTVLL 42.776542 508.302386462688 7339137.5 7636.0 ENSG00000234745|ENST00000412585|HLA-B;;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;;ENST00000498007.1_1_6:31324459-31324935:-|nuORF 4.882548252741496 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7642 42.778 72.0 759880.0 25 0 121160.0 + 14097 IAQIHRGG 8 86 426.24642693354144 850.4783009338829 2 426.2459899783134 MULTI CID FTMS 0 0 0 7636 626340.25 0.3810728247679593 -1 0.1514511108398437 6 Unmodified _IAQIHRGG_ REV__ENSG00000166391|ENST00000198801|MOGAT2;REV__nc|ENSG00000166391|Q3SYC2-3|MOGAT2 0.6903765706972694 0.8201419426409876 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.135 50381.4 1.0 4131 3509 7636 DOHH2_400M_050219_1,7642 DOHH2_400M_050219_1,7642,IAQIHRGG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7643 42.781 118.0 319750.0 25 0 29548.0 + 11260 GESSVGTNMGW 11 75 562.7369565987747 1123.4593602643492 2 562.7374145388603 MULTI CID FTMS 0 0 0 7636 454871.625 0.935239756234464 -1 0.1514511108398437 7 Unmodified _GESSVGTNMGW_ ENSG00000067533|ENST00000366932|RRP15;ENST00000491428.1_1_1:218458703-218475928:+|nuORF 19.256988751693697 0.6345794173041263 1 MGW 3 8 21.682 0.0 0.0 1.93 0.0 0.0 731.3067856567305 0.0 731.3067856567305 0.0 1.515026576427676 0.0 0.0 0 0.0 0.0 0.0 0.0 + MGW 1.93 + + 63 + 1 2.135 33558.4 1.0 4132 3509 7636 DOHH2_400M_050219_1,7643 DOHH2_400M_050219_1,7643,GESSVGTNMGW False True GESSVGTNMGW 42.780677 562.73741453886 3321887.75 7636.0 ENST00000491428.1_1_1:218458703-218475928:+|nuORF;;ENSG00000067533|ENST00000366932|RRP15 5.290294170379639 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7644 42.782 79.0 698870.0 25 0 45125.0 + 7082 EELPHIHAF 9 94 546.7776101276905 0 546.7776977419853 PEAK CID FTMS 0 0 0 7636 443772.0625 0.7018430371488797 -1 0.1514511108398437 8 Unmodified _EELPHIHAF_ ENSG00000169627|ENST00000651894|BOLA2B;ENSG00000183336|ENST00000330978|BOLA2;ENST00000567436.1_1_16:30204298-30204508:-|nuORF 36.12702656103203 0.0807574182900477 1 H{I|L}CYR 5 7 15.394 0.0 0.0 1.4103 0.0 0.0 254.1279570414858 162.0565584772094 416.1845155186952 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 H{I|L}CYR 1.4103 - 301 + 1 2.135 49181.6 1.0 4133 3509 7636 DOHH2_400M_050219_1,7644 DOHH2_400M_050219_1,7644,EELPHIHAF True True EELPHIHAF 42.782486 546.7787 6058652.0 7636.0 ENSG00000183336|ENST00000330978|BOLA2;;ENST00000567436.1_1_16:30204298-30204508:-|nuORF;;ENSG00000169627|ENST00000651894|BOLA2B 5.941920916239421 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7645 42.788 281.0 452540.0 25 0 71986.0 31657 RRGQVGPV 8 133 434.7594747082333 867.5043964832666 2 434.7589294314384 MULTI CID FTMS 0 0 0 7636 400319.53125 0.4690643403632186 -1 0.1514511108398437 9 Unmodified _RRGQVGPV_ ENST00000462875.1_1_6:31609004-31609235:-|nuORF 0.7936320650641473 0.8195151834710337 1 {I|L} 1 8 9.6777 0.0 0.0 1.1156 0.0 0.0 736.4095153570933 0.0 736.4095153570933 0.0 9.67771005386541 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1156 - 2 + 1 2.135 103370.0 1.0 4134 3509 7636 DOHH2_400M_050219_1,7645 DOHH2_400M_050219_1,7645,RRGQVGPV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7646 42.793 300.0 363350.0 25 0 29219.0 + 650 AELRYDLPASY 11 95 649.3253549009548 1296.6361568687096 2 649.3257934451103 MULTI CID FTMS 0 0 0 7636 289870.75 1.0 0 0.0 10 Unmodified _AELRYDLPASY_ ENSG00000138382|ENST00000260953|METTL5 46.0223103267499 0.1396584557920269 1 [PA]S[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}V{I|L}PASY 12 6 + 61.525 0.0 0.0 4.745 4.745 78.397 0.0 0.0 0.0 4.550595746758361 39.81266807291405 4.550595746758361 4.648415687162952 0 1.8182503180159344 1.0969100130080565 0.7302046884880937 0.0 [PA]S[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}V{I|L}PASY;{[{M(Oxidation (M))|F}C]|[YS]}A[NS][KP]{I|L}PASY;[PA][YV][WM]{I|L}PASY;[PA]S[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}VP{I|L}ASY;{[ET]|[MV]}[YE][KP]{I|L}PASY;{[CP]|[EA]}{I|L}R{[YD]|[{M(Oxidation (M))|F}M]}{I|L}PASY;{[{M(Oxidation (M))|F}C]|[YS]}A[NS][KP]P{I|L}ASY;{[QV]|[N{I|L}]|[RA]|[KV]}HH{M(Oxidation (M))|F}V{I|L}PASY;[TA]T{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}V{I|L}PASY;[PA][YV][WM]P{I|L}ASY 4.745;4.3865;4.061;3.9914;3.7408;3.6444;3.6329;3.5082;3.5026;3.3074 -;-;-;-;-;+;-;-;-;- + 306 1 2.135 87499.1 1.0 4135 3509 7636 DOHH2_400M_050219_1,7646 DOHH2_400M_050219_1,7646,AELRYDLPASY False True AELRYDLPASY 42.793175 649.32579344511 989955.0 7636.0 ENSG00000138382|ENST00000260953|METTL5 7.0393171310424805 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7647 42.798 284.0 233170.0 25 0 12819.0 + 32738 SEDDLKTVF 9 111 527.2577699888603 1052.5009870445206 2 527.2583495974541 MULTI CID FTMS 0 0 0 7636 229282.875 1.0 0 0.0 11 Unmodified _SEDDLKTVF_ ENSG00000106344|ENST00000223073|RBM28 31.26834338654808 0.1333407332142048 1 {NN|[MP]|[D{I|L}]|[EV]}D[KT]VEAY 9 6 + 48.273 0.0 0.0 4.5865 4.5865 72.607 0.0 0.0 0.0 6.722900387074517 15.44408732588998 6.722900387074517 0.4845500650402812 0 0.8494850021680094 1.0969100130080565 0.6747425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}D[KT]VEAY;{NN|[MP]|[D{I|L}]|[EV]}D[KT]D{I|L}AY;{NN|[MP]|[D{I|L}]|[EV]}D{[ES]|[DT]|[{I|L}C]}K{I|L}AY;{[ES]|[DT]|[{I|L}C]}DD{I|L}K{I|L}AY;{[TV]|[{I|L}S]}WWVEAY;{[TV]|[{I|L}S]}WWD{I|L}AY;{NN|[MP]|[D{I|L}]|[EV]}D[KT]DA{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}D{[ES]|[DT]|[{I|L}C]}KA{I|L}Y;{[MG]|[TS]}[HK]TV{M(Oxidation (M))|F}AY;{NN|[MP]|[D{I|L}]|[EV]}[QP]TV{M(Oxidation (M))|F}AY 4.5865;4.5405;4.2775;3.9477;3.8037;3.7576;3.4728;3.2098;3.1239;3.0705 -;-;-;-;-;-;-;-;-;- 399 1 2.135 58727.7 1.0 4136 3509 7636 DOHH2_400M_050219_1,7647 DOHH2_400M_050219_1,7647,SEDDLKTVF False True SEDDLKTVF 42.798428 527.258349597454 1693411.25 7636.0 ENSG00000106344|ENST00000223073|RBM28 2.1288435061772666 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7648 42.812 800.0 204960.0 25 0 12955.0 + 37752 TLRLKVEEL 9 163 550.839057193074 0 550.8376953005791 PEAK CID FTMS 0 0 0 7636 216300.78125 1.0 0 0.0 12 Unmodified _TLRLKVEEL_ ENSG00000002822|ENST00000265854|MAD1L1;nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1 55.50274090549119 0.0215595200729321 1 EEVK{I|L}RD 7 8 41.456 0.0 0.0 3.7699 0.0 0.0 131.0977612624136 96.08258997135 227.1803512337636 0.0 0.0 0.0 0.0 0 0.535666875892183 0.0 1.5189301784845295 0.0 EEVK{I|L}RD 3.7699 - 207 + 1 2.135 128146.7 0.8799999952316284 4137 3509 7636 DOHH2_400M_050219_1,7648 DOHH2_400M_050219_1,7648,TLRLKVEEL True True TLRLKVEEL 42.812259 550.837695300579 615939.375 7636.0 nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1;;ENSG00000002822|ENST00000265854|MAD1L1 1.4397943019866943 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7649 42.819 361.0 231270.0 25 0 19213.0 + -1 MANGAVIHL 9 114 463.24980625483454 462.24252978823455 1 463.2494689822197 MULTI CID FTMS 0 0 0 7636 201659.3125 1.0 0 0.0 13 ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1 1 {I|L}H{I|L} 3 -1 12.932 0.0 0.0 2.7976 0.0 0.0 81.00461695207811 0.0 81.00461695207811 0.0 3.440451648102384 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}H{I|L} 2.7976 - 34 + 1 2.135 68952.1 1.0 4138 3509 7636 DOHH2_400M_050219_1,7649 DOHH2_400M_050219_1,7649, False False MANGAVIHL 42.81875 463.24946898222 1775248.25 7636.0 ENSG00000099995|ENST00000215793|SF3A1;;nc|ENSG00000099995|Q15459-2|SF3A1 6.649960199991862 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7650 42.833 800.0 145930.0 25 0 15185.0 -1 YYESRCCRN 9 121 625.7570482981455 1249.499543663091 2 625.7568237185478 MULTI CID FTMS 0 0 0 7636 127262.90625 0.9408528779623636 -1 0.1514511108398437 14 Carbamidomethyl (C) _YYESRC(Carbamidomethyl (C))CRN_ ENSG00000155890|ENST00000286349|TRIM42;nc|ENSG00000155890|Q8IWZ5-2|TRIM42 12.531546534597751 0.4974689918368763 1 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}EH{M(Oxidation (M))|F} 6 -1 20.328 0.0 0.0 1.6269 0.0 0.0 0.0 444.1261725145583 444.1261725145583 1.74410632329284 0.0 0.0 0.0 0 0.0 1.0 0.3494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}EH{M(Oxidation (M))|F} 1.6269 - 320 1 2.135 92625.6 0.7300000190734863 4139 3509 7636 DOHH2_400M_050219_1,7650 DOHH2_400M_050219_1,7650,YYESRCCRN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7651 42.846 800.0 167090.0 25 0 12459.0 + 42867 VVLLKARLVPA 11 186 393.60402412253535 1177.790242967806 3 393.6035949587822 MULTI CID FTMS 0 0 0 7636 115761.890625 1.0 0 0.0 15 Unmodified _VVLLKARLVPA_ ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B 9.764250979337303 0.8290795630453686 1 {[RE]|[WV]}V{I|L}{I|L} 5 8 19.208 0.0 0.0 1.6309 0.0 0.0 0.0 564.3647554986936 564.3647554986936 9.3753063169585 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[RE]|[WV]}V{I|L}{I|L} 1.6309 - 72 + 1 2.135 109670.0 0.5099999904632568 4140 3509 7636 DOHH2_400M_050219_1,7651 DOHH2_400M_050219_1,7651,VVLLKARLVPA False True VVLLKARLVPA 42.846402 393.603594958782 436681.90625 7636.0 ENSG00000144369|ENST00000304698|FAM171B;;nc|ENSG00000144369|Q6P995-2|FAM171B 3.855365753173828 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7652 42.853 279.0 185500.0 25 0 26594.0 + 33818 SLDRRPSL 8 91 472.2699614720382 942.5253700108764 2 472.2687866091728 MULTI CID FTMS 0 0 0 7636 107704.328125 0.4901684039966518 4 -0.4292526245117187 16 Unmodified _SLDRRPSL_ REV__ENSG00000010818|ENST00000367603|HIVEP2 13.50788311687929 0.7113601687236069 1 {NN|[MP]|[D{I|L}]|[EV]}SGV 5 -1 23.887 0.0 0.0 2.5344 0.0 0.0 0.0 468.2730584231583 468.2730584231583 11.12322772108211 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}SGV 2.5344 - 41 1 2.135 46322.1 1.0 4141 3509 7636 DOHH2_400M_050219_1,7652 DOHH2_400M_050219_1,7652,SLDRRPSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7653 42.867 800.0 160490.0 25 0 14532.0 + 19931 LICLLWVL 8 152 486.79973927423 971.58492561526 2 486.7999450564384 MULTI CID FTMS 0 0 0 7636 84654.96875 1.0 0 0.0 17 Unmodified _LICLLWVL_ ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7 24.20995872069341 0.5349487244130675 1 {I|L}{I|L}{[MG]|[TS]}AE 6 6 24.503 0.0 0.0 2.522 0.0 0.0 0.0 354.24084537527887 354.24084537527887 11.404536125696776 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.2887254899964357 0.0 {I|L}{I|L}{[MG]|[TS]}AE 2.522 - 212 1 2.135 101360.0 0.4799999892711639 4142 3509 7636 DOHH2_400M_050219_1,7653 DOHH2_400M_050219_1,7653,LICLLWVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7654 42.868 50.0 1040200.0 25 0 150530.0 + 36748 TDVYVNNEW 9 82 570.2533709245473 1138.4921889158943 2 570.2526122927666 MULTI CID FTMS 0 0 0 7636 230297.671875 0.1278351658363032 -2 0.2590599060058594 18 Unmodified _TDVYVNNEW_ ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A 26.88365393820708 0.1891292719743517 1 [YV]DTV 5 7 23.901 0.0 0.0 2.0993 0.0 0.0 0.0 558.1943733243507 558.1943733243507 5.629778129126279 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [YV]DTV 2.0993 - 132 1 2.135 46614.2 1.0 4143 3509 7636 DOHH2_400M_050219_1,7654 DOHH2_400M_050219_1,7654,TDVYVNNEW False True TDVYVNNEW 42.868154 570.252612292767 12630206.0 7636.0 ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 4.894686381022136 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7655 42.874 307.0 259500.0 25 0 16575.0 -1 0 122 479.2777876445748 478.2705111779748 1 481.2844726443291 MULTI CID FTMS 0 0 0 7636 189808.6875 0.7385417337961978 1 -0.1123847961425781 19 1 {I|L} 1 -1 12.764 0.0 0.0 2.6688 0.0 0.0 347.1752790996529 0.0 347.1752790996529 0.0 1.170416030166841 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.6688 - 50 + 1 2.135 64976.8 1.0 4144 3509 7636 DOHH2_400M_050219_1,7655 DOHH2_400M_050219_1,7655, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7656 42.878 134.0 394400.0 25 0 67651.0 + 6193 DTEKELQALY 10 78 605.303926220771 1208.593299508342 2 605.3030883669853 MULTI CID FTMS 0 0 0 7636 154647.984375 0.48882207930483 -1 0.1514511108398437 20 Unmodified _DTEKELQALY_ ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3;nc|ENSG00000075151|O43432|EIF4G3 38.17557092003332 0.1768326257063233 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AG{[C(Carbamidomethyl (C))G]|[NC]}K{M(Oxidation (M))|F}{I|L}Y 10 8 + 41.036 0.0 0.0 3.3953 3.3953 69.956 0.0 0.0 0.0 24.046153208173777 13.505018913849652 13.505018913849652 1.3650063603186808 0 0.0 0.0 0.0 0.6421590589602533 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AG{[C(Carbamidomethyl (C))G]|[NC]}K{M(Oxidation (M))|F}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQHH{M(Oxidation (M))|F}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AGAYDKKY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A[C(Carbamidomethyl (C))N]K{M(Oxidation (M))|F}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AGAHH{M(Oxidation (M))|F}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQYDKKY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QAHH{M(Oxidation (M))|F}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{[C(Carbamidomethyl (C))G]|[NC]}K{M(Oxidation (M))|F}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QAYDKKY;{[ES]|[DT]|[{I|L}C]}[KP]HHAGA[Y{I|L}] 3.3953;3.2824;3.258;3.2496;3.1131;3.1123;2.8876;2.8549;2.7175;1.8835 -;-;-;-;-;-;-;-;-;- 167 + 1 2.135 44578.8 1.0 4145 3509 7636 DOHH2_400M_050219_1,7656 DOHH2_400M_050219_1,7656,DTEKELQALY False True DTEKELQALY 42.877654 605.303088366985 1657060.5 7636.0 nc|ENSG00000075151|O43432|EIF4G3;;nc|ENSG00000075151|O43432-3|EIF4G3;;ENSG00000075151|ENST00000602326|EIF4G3;;nc|ENSG00000075151|O43432-4|EIF4G3 6.412238121032715 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7658 42.885 177.0 303510.0 25 0 41089.0 + 26418 NTDPWAGYRY 10 71 621.7803332521556 1241.5461135711112 2 621.7803832888603 MULTI CID FTMS 0 0 0 7657 263832.25 0.2012494936958941 2 -0.2009124755859375 1 Unmodified _NTDPWAGYRY_ ENSG00000164024|ENST00000296411|METAP1;ENST00000510209.5_1_4:99916904-99957225:+|nuORF;ENST00000513199.5_1_4:99943548-99960531:+|nuORF 63.960520009940105 0.0261970246776379 1 {[QS]|[NT]}DPWAGYRY 10 0 + 72.995 0.0 0.0 5.8794 5.8794 84.29 0.0 0.0 0.0 61.005570318307065 10.411170482246304 10.411170482246304 6.53212513775344 0 0.8807196863200843 1.5228787452803376 0.0 0.4247425010840047 + + {[QS]|[NT]}DPWAGYRY;{[QS]|[NT]}DPWQYRY 5.8794;5.3533 +;- + 306 + 1 2.127 43956.8 1.0 4146 3510 7657 DOHH2_400M_050219_1,7658 DOHH2_400M_050219_1,7658,NTDPWAGYRY True True NTDPWAGYRY 42.884779 621.78038328886 20708070.0 7657.0 ENSG00000164024|ENST00000296411|METAP1;;ENST00000510209.5_1_4:99916904-99957225:+|nuORF;;ENST00000513199.5_1_4:99943548-99960531:+|nuORF 8.670626958211264 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7659 42.887 102.0 380140.0 25 0 58408.0 + 34527 SPAHILNLL 9 77 489.2929542202963 976.5713555073926 2 489.2925598025322 MULTI CID FTMS 0 0 0 7657 273599.1875 0.2591016409937704 2 -0.2009124755859375 2 Unmodified _SPAHILNLL_ REV__nc|ENSG00000258628|A8MT19|RHPN2P1 18.13498045792455 0.3457906370836843 1 {I|L}VT{[CA]|SS}{I|L} 6 -1 34.698 0.0 0.0 3.553 0.0 0.0 358.2213470063861 0.0 358.2213470063861 0.0 23.860366614179995 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 {I|L}VT{[CA]|SS}{I|L} 3.553 - 71 + 1 2.127 38847.3 1.0 4147 3510 7657 DOHH2_400M_050219_1,7659 DOHH2_400M_050219_1,7659,SPAHILNLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7660 42.888 58.0 1490400.0 25 0 126590.0 + 7081 EELPHIHAF 9 111 364.8537996109266 1091.53956943298 3 364.8535034060478 MULTI CID FTMS 0 0 0 7657 962593.0 1.0 0 0.0 3 Unmodified _EELPHIHAF_ ENSG00000169627|ENST00000651894|BOLA2B;ENSG00000183336|ENST00000330978|BOLA2;ENST00000567436.1_1_16:30204298-30204508:-|nuORF 19.256988751693697 0.3154191944385105 1 {[QN]|[E{I|L}]|[KN]}M{I|L}S{M(Oxidation (M))|F}A 7 6 38.65 0.0 0.0 3.5409 0.0 0.0 0.0 297.1076954417775 297.1076954417775 14.493106925747412 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}M{I|L}S{M(Oxidation (M))|F}A 3.5409 - 487 1 2.127 76425.2 1.0 4148 3510 7657 DOHH2_400M_050219_1,7660 DOHH2_400M_050219_1,7660,EELPHIHAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7661 42.89 93.0 322030.0 25 0 39274.0 39013 TVSFLVTHK 9 58 516.2957957070188 1030.5770384808377 2 516.2961913943291 MULTI CID FTMS 0 0 0 7657 676129.0625 0.6073187135340089 -1 0.1123847961425781 4 Unmodified _TVSFLVTHK_ ENST00000354371.6_1_2:238006612-238006942:+|nuORF 4.3292370932331545 0.7635526921153418 1 {I|L} 1 8 10.278 0.0 0.0 0.99727 0.0 0.0 899.4820352843516 0.0 899.4820352843516 0.0 9.168342891167374 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.99727 + + 14 + 1 2.127 29494.0 1.0 4149 3510 7657 DOHH2_400M_050219_1,7661 DOHH2_400M_050219_1,7661,TVSFLVTHK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7662 42.892 78.0 576120.0 25 0 79558.0 + 10438 FTEEQAVLY 9 71 550.2691266653113 1098.5237003974223 2 550.2691528201103 MULTI CID FTMS 0 0 0 7657 639439.6875 0.6254303983808677 -1 0.1123847961425781 5 Unmodified _FTEEQAVLY_ ENSG00000167881|ENST00000307877|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68 37.97399986684836 0.0865783450051559 1 AQEE{[ET]|[MV]} 6 6 21.247 0.0 0.0 1.9341 0.0 0.0 393.2271556975998 0.0 393.2271556975998 0.0 -2.240378209512315 -2.240378209512315 0.0 0 0.0 0.0 0.7302046884880937 0.0 AQEE{[ET]|[MV]} 1.9341 - 138 + 1 2.127 40718.3 1.0 4150 3510 7657 DOHH2_400M_050219_1,7662 DOHH2_400M_050219_1,7662,FTEEQAVLY True True FTEEQAVLY 42.892252 550.26915282011 6087714.5 7657.0 nc|ENSG00000167881|Q9UHB9-4|SRP68;;ENSG00000167881|ENST00000307877|SRP68;;nc|ENSG00000167881|Q9UHB9-2|SRP68 5.862579981486003 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7663 42.894 100.0 467750.0 25 0 105080.0 + 26331 NSDNNTIFV 9 71 512.2407691801344 1022.4669854270688 2 512.2409545779228 MULTI CID FTMS 0 0 0 7657 397767.21875 0.7919147436906047 -1 0.1123847961425781 6 Unmodified _NSDNNTIFV_ ENSG00000089280|ENST00000254108|FUS;ENSG00000270647|ENST00000605844|TAF15;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;nc|ENSG00000089280|P35637-2|FUS;nc|ENSG00000270647|Q92804-2|TAF15 29.081581746732265 0.1611639662936252 1 [NS][DN]NT{I|L}{M(Oxidation (M))|F}V 9 0 [NS][DN]NT{I|L} + + 16.198 15.467 2.0397 1.5842 1.5842 48.604 0.0 0.0 0.0 0.0 -3.4067466775815127 -3.4067466775815127 0.0 0 0.0 0.0 0.0 0.0 + + [NS][DN]NT{I|L}{M(Oxidation (M))|F}V 1.5842 + + 36 + 1 2.127 40316.4 1.0 4151 3510 7657 DOHH2_400M_050219_1,7663 DOHH2_400M_050219_1,7663,NSDNNTIFV False True NSDNNTIFV 42.894421 512.240954577923 3526369.75 7657.0 ENSG00000089280|ENST00000254108|FUS;;ENSG00000270647|ENST00000605844|TAF15;;nc|ENSG00000270647|Q92804-2|TAF15;;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 4.397002855936687 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7664 42.898 168.0 354950.0 25 0 51207.0 + -1 IMWTKRKK 8 100 553.8305350476262 1105.6465171620523 2 553.8302490115166 MULTI CID FTMS 0 0 0 7657 388830.875 1.0 0 0.0 7 Oxidation (M) _IM(Oxidation (M))WTKRKK_ REV__ENST00000357607.6_1_X:15544172-15549526:+|nuORF 5.230669730166228 0.792582437072536 1 {M(Oxidation (M))|F} 1 -1 10.278 0.0 0.0 0.92955 0.0 0.0 940.5666049079492 0.0 940.5666049079492 0.0 1.6483758855675532 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.92955 + + 29 + 1 2.127 50283.7 1.0 4152 3510 7657 DOHH2_400M_050219_1,7664 DOHH2_400M_050219_1,7664,IMWTKRKK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7665 42.912 800.0 293360.0 25 0 95138.0 + 26373 NSYWVGEDSTY 11 137 660.7724626975378 1319.5303724618757 2 660.7730590701103 MULTI CID FTMS 0 0 0 7657 256146.34375 0.2788085472121706 2 -0.2009124755859375 8 Unmodified _NSYWVGEDSTY_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 51.41523569358685 0.1097924807909074 1 [NS]YWVW 6 6 45.167 0.0 0.0 3.4229 0.0 0.0 0.0 481.154981186738 481.154981186738 22.96037188729641 0.0 0.0 0.0 0 0.5 1.0 0.9386218330464626 0.6879453597024813 [NS]YWVW 3.4229 - 821 1 2.127 168043.4 0.959999978542328 4153 3510 7657 DOHH2_400M_050219_1,7665 DOHH2_400M_050219_1,7665,NSYWVGEDSTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7666 42.916 251.0 350100.0 25 0 35902.0 + 1798 ALSPVPSHW 9 107 497.26124968482367 992.5079464364474 2 497.2618286013603 MULTI CID FTMS 0 0 0 7657 245252.875 0.8113754161506891 -1 0.1123847961425781 9 Unmodified _ALSPVPSHW_ ENSG00000007312|ENST00000006750|CD79B;ENST00000558969.1_1_17:62008689-62009627:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B;nc|ENSG00000007312|P40259-3|CD79B 48.345845343767074 0.0439967357579942 1 [{I|L}A]SPVPSHW 9 0 + 78.126 0.0 0.0 7.8716 7.8716 86.238 0.0 0.0 0.0 27.147642715192504 3.4678748622465605 3.4678748622465605 3.4678748622465605 0 0.9247425010840048 2.0 0.3807196863200844 0.0 + + [{I|L}A]SPVPSHW;[{I|L}A]SPVPSWH;[{I|L}A]SPVW[PS]H;[{I|L}A]SPVP[C(Carbamidomethyl (C))H]{I|L};[VP][EC]PVP[RP];[{I|L}A]SPK[YE]W;[PS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PVP[RP];[VP]{[WN]|[YH]}QP[RP];[{I|L}A]S[RH][C(Carbamidomethyl (C))H]{I|L};[PS][NP]TQP[RP] 7.8716;7.5222;5.7133;5.5211;4.4493;4.3395;4.0416;3.4618;3.2824;3.2261 +;-;-;-;-;-;-;-;-;- + 319 + 1 2.127 70825.6 1.0 4154 3510 7657 DOHH2_400M_050219_1,7666 DOHH2_400M_050219_1,7666,ALSPVPSHW True True ALSPVPSHW 42.91621 497.26182860136 2140122.5 7657.0 nc|ENSG00000007312|P40259-3|CD79B;;ENSG00000007312|ENST00000006750|CD79B;;nc|ENSG00000007312|P40259-2|CD79B;;ENST00000558969.1_1_17:62008689-62009627:-|nuORF 7.095327218373616 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7667 42.92 188.0 502990.0 25 0 26097.0 + 4817 DEVDRISEW 9 126 574.7643026472446 1147.514052361289 2 574.7642700076103 MULTI CID FTMS 0 0 0 7657 230492.171875 1.0 0 0.0 10 Unmodified _DEVDRISEW_ ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2 45.739877483867886 0.0497104363764649 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VD 4 5 32.848 0.0 0.0 2.8626 0.0 0.0 0.0 686.3297823541624 686.3297823541624 -5.30394370788877 0.0 -5.30394370788877 0.0 0 0.4247425010840047 0.8239087409443188 0.6549471895720984 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VD 2.8626 + + 1014 + 1 2.127 72876.4 1.0 4155 3510 7657 DOHH2_400M_050219_1,7667 DOHH2_400M_050219_1,7667,DEVDRISEW True True DEVDRISEW 42.919845 574.76427000761 2316007.25 7657.0 nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;;ENSG00000167674|ENST00000616600|HDGFL2;;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2;;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2 7.154818693796794 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7668 42.934 800.0 423340.0 25 0 48962.0 + 5172 DILPKKIL 8 193 470.3153857900182 938.6162186468364 2 470.3152953982353 MULTI CID FTMS 0 0 0 7657 233356.703125 0.3063021857941428 -2 0.2638359069824219 11 Unmodified _DILPKKIL_ ENSG00000104472|ENST00000220913|CHRAC1 49.93300154707207 0.1395624531867191 1 {I|L}D{I|L}PKK{I|L}{I|L} 8 2 + 82.695 0.0 0.0 8.8103 8.8103 89.425 0.0 0.0 0.0 44.23495587607803 14.904630595263413 14.904630595263413 5.587342808559157 0 1.5575080496676392 2.0 0.4247425010840047 0.0 {I|L}D{I|L}PKK{I|L}{I|L};D{I|L}{I|L}PKK{I|L}{I|L};[KP]K{I|L}{I|L}{I|L}D{I|L};[KP]K{I|L}{I|L}D{I|L}{I|L};[{I|L}P]KK{I|L}{I|L}D{I|L};[{I|L}P]KK{I|L}D{I|L}{I|L};KKP{I|L}{I|L}{I|L}D{I|L};KKP{I|L}{I|L}D{I|L}{I|L};[KP]{I|L}K{I|L}{I|L}D{I|L};[KP]{I|L}K{I|L}D{I|L}{I|L} 8.8103;8.2151;3.9787;3.9655;3.8502;3.8371;3.7423;3.7292;3.4703;3.4572 -;+;-;-;-;-;-;-;-;- + 355 + 1 2.127 259334.5 0.800000011920929 4156 3510 7657 DOHH2_400M_050219_1,7668 DOHH2_400M_050219_1,7668,DILPKKIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7669 42.943 549.0 335920.0 25 0 35907.0 + 29442 QLGSKYIL 8 172 461.2737170679406 920.5328812026812 2 461.2735778689384 MULTI CID FTMS 0 0 0 7657 146721.359375 0.3654088782582782 -1 0.1123847961425781 12 Unmodified _QLGSKYIL_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 53.57557251787612 0.1224291679108181 1 [KS]GY{I|L}{I|L}Q{I|L} 8 6 + 38.73 0.0 0.0 4.2074 4.2074 82.359 0.0 0.0 0.0 15.339614295016077 27.771220049713023 15.339614295016077 9.262137858390808 0 0.4247425010840047 0.0 1.5189301784845295 0.3252574989159953 [KS]GY{I|L}{I|L}Q{I|L};[KS]GY{I|L}{I|L}[AG]{I|L};[VP][NP]{I|L}A[TP]{I|L} 4.2074;3.2012;2.1431 -;-;- 668 1 2.127 142578.9 1.0 4157 3510 7657 DOHH2_400M_050219_1,7669 DOHH2_400M_050219_1,7669,QLGSKYIL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7670 42.957 800.0 133990.0 25 0 7196.9 + 14231 IDRCVWIFY 9 144 607.8061458357116 1213.5977387382231 2 607.8057739138603 MULTI CID FTMS 0 0 0 7657 138255.671875 1.0 0 0.0 13 Unmodified _IDRCVWIFY_ REV__ENSG00000086991|ENST00000263317|NOX4;REV__nc|ENSG00000086991|Q9NPH5-2|NOX4;REV__nc|ENSG00000086991|Q9NPH5-3|NOX4;REV__nc|ENSG00000086991|Q9NPH5-4|NOX4;REV__nc|ENSG00000086991|Q9NPH5-6|NOX4;REV__nc|ENSG00000086991|Q9NPH5-8|NOX4;REV__nc|ENSG00000086991|Q9NPH5-9|NOX4 23.1484247019978 0.2366544122328345 1 Y{M(Oxidation (M))|F}{I|L}VR[QP]EY 9 -1 + 57.573 0.0 0.0 4.744 4.744 83.425 0.0 0.0 0.0 33.272824578659055 13.3771376077312 13.3771376077312 9.208187539523747 0 0.5 0.0 1.0 0.0 Y{M(Oxidation (M))|F}{I|L}VR[QP]EY;Y{M(Oxidation (M))|F}{I|L}V[VG][QP]EY;[YE][{I|L}A]{[QS]|[NT]}V{I|L}EY;[{I|L}T][QA]{[YD]|[{M(Oxidation (M))|F}M]}V{I|L}EY;[YT][RD]RV{I|L}EY;[YE][WK][{I|L}A]{I|L}EY;[YE][{I|L}A][WK]{I|L}EY;{[QN]|[E{I|L}]|[KN]}ER[YV]NEY;{NN|[MP]|[D{I|L}]|[EV]}[KG]{[YD]|[{M(Oxidation (M))|F}M]}V{I|L}EY;[MT][R{M(Oxidation (M))|F}]RV{I|L}EY 4.744;3.9852;3.6409;3.6162;3.5137;3.4258;3.1027;2.9272;2.9233;2.8968 -;-;-;-;-;-;-;-;-;- 1023 + 1 2.127 82911.8 0.6899999976158142 4158 3510 7657 DOHH2_400M_050219_1,7670 DOHH2_400M_050219_1,7670,IDRCVWIFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7671 42.971 742.0 169170.0 25 0 13329.0 + 42336 VTAHTRNI 8 175 456.2566899302252 910.4988269272504 2 456.2559081912041 MULTI CID FTMS 0 0 0 7657 105096.90625 0.2054667167966776 7 -0.7164649963378906 14 Unmodified _VTAHTRNI_ REV__ENSG00000101639|ENST00000506447|CEP192;REV__ENST00000513432.5_1_18:13059017-13124766:+|nuORF;REV__nc|ENSG00000101639|Q8TEP8-1|CEP192;REV__nc|ENSG00000101639|Q8TEP8-2|CEP192 8.593279151180031 0.7721714526254883 1 EV{[QV]|[N{I|L}]|[RA]|[KV]} 4 -1 13.188 0.0 0.0 1.4484 0.0 0.0 437.2614002912125 0.0 437.2614002912125 0.0 0.7133375178436552 0.0 0.0 0 0.0 0.0 0.0 0.0 EV{[QV]|[N{I|L}]|[RA]|[KV]} 1.4484 - 108 1 2.127 97264.1 1.0 4159 3510 7657 DOHH2_400M_050219_1,7671 DOHH2_400M_050219_1,7671,VTAHTRNI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7672 42.985 777.0 237800.0 25 0 13950.0 11810 GLMVGGVVI 9 158 422.7519558723643 0 422.7518493533134 PEAK CID FTMS 0 0 0 7657 92977.078125 1.0 0 0.0 15 Unmodified _GLMVGGVVI_ ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-11|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP 14.581692164780916 0.2597149829103905 1 PH{I|L} 3 8 13.812 0.0 0.0 1.6375 0.0 0.0 96.01294943915362 397.257084949757 493.2700343889106 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PH{I|L} 1.6375 - 136 + 1 2.127 145284.8 1.0 4160 3510 7657 DOHH2_400M_050219_1,7672 DOHH2_400M_050219_1,7672,GLMVGGVVI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7673 42.986 38.0 1481500.0 25 0 249870.0 + 1365 ALAALVNDGR 10 72 500.2827811471595 998.551009361119 2 500.2828552126884 MULTI CID FTMS 0 0 0 7657 954262.8125 0.6785722920449178 -1 0.1123847961425781 16 Unmodified _ALAALVNDGR_ REV__LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|26|3|sense 3.5964929083625545 0.7100006075494749 1 H 1 -1 0.48455 0.0 0.0 0.048525 0.0 0.0 652.386899108969 206.07785974674064 858.4647588557096 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.048525 - 2 + 1 2.127 51740.4 1.0 4161 3510 7657 DOHH2_400M_050219_1,7673 DOHH2_400M_050219_1,7673,ALAALVNDGR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7674 42.991 169.0 419650.0 25 0 60930.0 -1 0 85 479.2777876445748 478.2705111779748 1 479.2780334353447 MULTI CID FTMS 0 0 0 7657 557023.125 0.3099071089224714 2 -0.2009124755859375 17 1 {I|L} 1 -1 12.218 0.0 0.0 2.5547 0.0 0.0 347.17530961723105 0.0 347.17530961723105 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.5547 - 15 + 1 2.127 60716.3 1.0 4162 3510 7657 DOHH2_400M_050219_1,7674 DOHH2_400M_050219_1,7674, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7675 43.004 800.0 107650.0 25 0 8328.5 -1 0 95 987.1332589050744 2958.3779473154227 3 987.4676391482352 MULTI CID FTMS 0 0 0 7657 198525.1875 1.0 0 0.0 18 1 D{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}H{[CT]|[{M(Oxidation (M))|F}G]}{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 25.903 0.0 0.0 0.87558 0.0 0.0 1980.003413298164 0.0 1980.003413298164 0.0 15.44531259372398 0.0 0.0 0 1.0 0.0 0.0 0.9247425010840048 D{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}H{[CT]|[{M(Oxidation (M))|F}G]}{[QD]|[EN]|[WG]|[KD]|[RS]} 0.87558 - 71 1 2.127 66053.7 0.6299999952316284 4163 3510 7657 DOHH2_400M_050219_1,7675 DOHH2_400M_050219_1,7675, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7677 43.009 26.0 2172300.0 25 0 339470.0 + 33827 SLDVGGPLRY 10 65 538.790140766421 1075.565728599642 2 538.7906982302666 MULTI CID FTMS 0 0 0 7676 1394614.75 0.2835983524382978 1 -0.0739364624023437 1 Unmodified _SLDVGGPLRY_ ENSG00000176894|ENST00000317479|PXMP2 20.41453444215458 0.5050059513928961 1 {[TV]|[{I|L}S]}DVGG 6 4 57.664 0.0 0.0 5.3613 0.0 0.0 0.0 544.2882784479124 544.2882784479124 47.2062251842808 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[TV]|[{I|L}S]}DVGG 5.3613 + + 82 + 1 2.133 52678.2 1.0 4164 3511 7676 DOHH2_400M_050219_1,7677 DOHH2_400M_050219_1,7677,SLDVGGPLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7678 43.01 21.0 2652800.0 25 0 509230.0 + 6632 EATIIRNKT 9 85 523.3034874834204 1044.5924220336408 2 523.3040649294853 MULTI CID FTMS 0 0 0 7676 2654308.5 0.932639474929487 -1 0.1269760131835937 2 Unmodified _EATIIRNKT_ REV__ENSG00000105369|ENST00000221972|CD79A;REV__nc|ENSG00000105369|P11912-2|CD79A 2.059750862983233 0.8427793054688888 1 Y 1 -1 13.495 0.0 0.0 1.2919 0.0 0.0 863.517697767819 0.0 863.517697767819 0.0 11.901056208558032 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2919 - 8 + 1 2.133 48094.3 1.0 4165 3511 7676 DOHH2_400M_050219_1,7678 DOHH2_400M_050219_1,7678,EATIIRNKT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7679 43.013 100.0 1175400.0 25 0 76240.0 + 25964 NLPPHIIRL 9 103 358.2254054873107 1071.6543870621322 3 358.2254821658134 MULTI CID FTMS 0 0 0 7676 725877.875 0.6234742549206171 -2 0.2393608093261718 3 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 17.44264345198275 0.3645313841742926 1 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}[R{I|L}] 9 0 + 61.616 0.0 0.0 5.7496 5.7496 80.271 0.0 0.0 0.0 48.12137499549429 5.642492736872597 5.642492736872597 3.0102999566398125 0 0.2742275032520141 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PP{I|L}H{I|L}[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PH{I|L}[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PPH{I|L}[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}[R{I|L}] 5.7496;5.4687;5.1878;4.9069;3.9999 +;-;-;-;- + 96 + 1 2.133 102241.6 1.0 4166 3511 7676 DOHH2_400M_050219_1,7679 DOHH2_400M_050219_1,7679,NLPPHIIRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7680 43.015 139.0 453310.0 25 0 70233.0 + 7377 EGFLKAQAL 9 95 488.7764993010503 975.5384456689004 2 488.7767516970634 MULTI CID FTMS 0 0 0 7676 426249.28125 1.0 0 0.0 4 Unmodified _EGFLKAQAL_ ENSG00000136758|ENST00000376016|YME1L1;ENST00000463270.1_1_10:27418274-27425210:-|nuORF;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1 36.04419817259434 0.0971720506436186 1 {[DA]|[EG]}{M(Oxidation (M))|F} 3 6 19.067 0.0 0.0 1.9545 0.0 0.0 0.0 639.3828725089974 639.3828725089974 0.950627212872888 0.0 0.0 0.0 0 0.5 0.6575773191777937 0.5484550065040282 0.0 + {[DA]|[EG]}{M(Oxidation (M))|F} 1.9545 + + 440 1 2.133 53447.9 1.0 4167 3511 7676 DOHH2_400M_050219_1,7680 DOHH2_400M_050219_1,7680,EGFLKAQAL True True EGFLKAQAL 43.015343 488.776751697063 2363103.0 7676.0 nc|ENSG00000136758|Q96TA2|YME1L1;;ENST00000463270.1_1_10:27418274-27425210:-|nuORF;;ENSG00000136758|ENST00000376016|YME1L1;;nc|ENSG00000136758|Q96TA2-3|YME1L1 4.0804258187611895 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7681 43.018 148.0 375890.0 25 0 21172.0 -1 RCHRRRRRCCC 11 62 866.9070431313726 1731.799533329545 2 867.3999511599541 MULTI CID FTMS 0 0 0 7676 331098.625 0.031271167863495 12 -1.089984893798828 5 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 1 [MN]P[HV]RQDAD{I|L}NP[EP] 15 -1 + 63.704 0.0 0.0 3.6785 3.6785 76.878 0.0 0.0 0.0 12.09544243948811 6.690067809585756 6.690067809585756 6.690067809585756 0 0.0 1.5228787452803376 0.0 0.6694451763165201 [MN]P[HV]RQDAD{I|L}NP[EP];[MN]P[HV]RQWD{I|L}NP[EP];[MN]P[HV]RQDW{I|L}NP[EP];[MN]P[HV]R[AG]DAD{I|L}NP[EP];[MN]P[HV]RQDAD{I|L}GGP[EP];[MN]P[HV][VG]QDAD{I|L}NP[EP];[NP]M[HV]RQDAD{I|L}NP[EP];[MN]P[HV]R[AG]WD{I|L}NP[EP];[MN]P[HV][VG]QWD{I|L}NP[EP];[MN]P[HV][VG]QDW{I|L}NP[EP] 3.6785;3.2922;3.2922;3.157;3.157;3.157;2.9801;2.7696;2.7696;2.7696 -;-;-;-;-;-;-;-;-;- 511 1 2.133 43142.3 1.0 4168 3511 7676 DOHH2_400M_050219_1,7681 DOHH2_400M_050219_1,7681,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7682 43.021 131.0 514030.0 25 0 46671.0 11341 GFKYFKNLI 9 90 377.2169414190535 0 377.2168456912041 PEAK CID FTMS 0 0 0 7676 307719.625 0.1741831299651868 9 -0.8006820678710938 6 Unmodified _GFKYFKNLI_ ENSG00000188994|ENST00000369577|ZNF292;nc|ENSG00000188994|O60281-2|ZNF292;ZNF292|p.D2051Tfs*9|1|0.79|ENSG00000188994|chr6:87259779-87259779|T/-|frameshift_variant 2.735195868890462 0.3444685223463735 1 V 1 9 6.9897 0.0 0.0 0.92896 0.0 0.0 203.09097404728817 447.23874841861567 650.3297224659038 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.92896 - 6 + 1 2.133 56603.8 1.0 4169 3511 7676 DOHH2_400M_050219_1,7682 DOHH2_400M_050219_1,7682,GFKYFKNLI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7683 43.027 313.0 600290.0 25 0 89553.0 + 28404 DPGLGVLRKTAL 12 117 620.3745879090409 1238.7346228848817 2 620.3750488162041 MULTI CID FTMS 0 0 0 7676 302460.21875 0.5102204051956969 -1 0.1269760131835937 7 Unmodified _PSPTRIKQSLL_ ENST00000487264.5_1_19:59086841-59086880:+|nuORF 16.565877749689598 0.6905575015977202 1 DPG{I|L}GV{I|L}RKTA{I|L} 12 9 + 114.13 0.0 0.0 9.2137 9.2137 97.332 0.0 0.0 0.0 76.09332260915907 15.410254976765358 15.410254976765358 19.987737688117235 0 3.278659694992122 1.6989700043360187 0.3494850021680094 0.3252574989159953 DPG{I|L}GV{I|L}RKTA{I|L};DPG{I|L}R{I|L}[VG]KTA{I|L};[DP]G{I|L}GV{I|L}RKTA{I|L};DP{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}RKTA{I|L};D{I|L}[PG]GV{I|L}RKTA{I|L};DP{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}[VG]KTA{I|L};[PG]D{I|L}GV{I|L}RKTA{I|L};D{I|L}[NP]V{I|L}RKTA{I|L};D{I|L}[PG]R{I|L}[VG]KTA{I|L};[DP]{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}RKTA{I|L} 9.2137;7.6001;6.2005;6.118;5.5855;5.3811;4.5555;4.1642;3.9719;3.5245 -;-;-;-;-;-;-;-;-;- 636 + 1 2.133 139312.0 1.0 4170 3511 7676 DOHH2_400M_050219_1,7683 DOHH2_400M_050219_1,7683,PSPTRIKQSLL False False DPGLGVLRKTAL 43.026726 620.375048816204 2968848.5 7676.0 ENST00000487264.5_1_19:59086841-59086880:+|nuORF 7.973962624867757 2.0 False 12.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 7684 43.033 337.0 228980.0 25 0 8759.7 -1 0 91 908.4258259762828 1814.8370990193653 2 908.926318347454 MULTI CID FTMS 0 0 0 7676 290559.59375 1.0 0 0.0 8 1 [MN]PN{I|L}NEAQ[HV]EN{I|L} 14 -1 64.1 0.0 0.0 3.532 0.0 0.0 0.0 208.07317529849848 208.07317529849848 50.91260409563674 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.3494850021680094 [MN]PN{I|L}NEAQ[HV]EN{I|L} 3.532 - 411 + 1 2.133 55462.1 1.0 4171 3511 7676 DOHH2_400M_050219_1,7684 DOHH2_400M_050219_1,7684, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7685 43.036 171.0 490820.0 25 0 60267.0 + 2041 APKLMVRPF 9 107 353.5440491429377 1057.6103180290131 3 353.5439025759697 MULTI CID FTMS 0 0 0 7676 279646.34375 1.0 0 0.0 9 Unmodified _APKLMVRPF_ ENST00000404933.6_1_X:21958871-21985334:+|nuORF 17.44264345198275 0.3645313841742926 1 APK{I|L}MVR{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 9 0 + 68.554 0.0 0.0 6.482 6.482 86.905 0.0 0.0 0.0 61.47608139917317 9.137342758552691 9.137342758552691 7.257724967479859 0 0.4247425010840047 0.619788758288394 0.3494850021680094 0.0 + + APK{I|L}MVR{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};APK{M(Oxidation (M))|F}PVR{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.482;5.7958 +;- + 118 + 1 2.133 73809.8 1.0 4172 3511 7676 DOHH2_400M_050219_1,7685 DOHH2_400M_050219_1,7685,APKLMVRPF False True APKLMVRPF 43.036201 353.54390257597 1721648.5 7676.0 ENST00000404933.6_1_X:21958871-21985334:+|nuORF 7.019407272338867 3.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7686 43.04 211.0 649960.0 25 0 96587.0 + 9458 FLDDGHTFNY 10 135 614.767320654023 1227.520088374846 2 614.7676269412041 MULTI CID FTMS 0 0 0 7676 228713.484375 0.1285204599659823 -2 0.2393608093261718 10 Unmodified _FLDDGHTFNY_ ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB 80.6760300276096 0.0165137828474802 1 YT{M(Oxidation (M))|F}N{I|L}{M(Oxidation (M))|F}Y 7 8 54.774 0.0 0.0 4.4621 0.0 0.0 261.0637379376969 0.0 261.0637379376969 0.0 2.7897115382466424 0.0 0.0 0 0.4247425010840047 0.0 1.079689690656103 0.6549471895720984 YT{M(Oxidation (M))|F}N{I|L}{M(Oxidation (M))|F}Y 4.4621 - 5027 1 2.133 102873.1 1.0 4173 3511 7676 DOHH2_400M_050219_1,7686 DOHH2_400M_050219_1,7686,FLDDGHTFNY True True FLDDGHTFNY 43.040222 614.767626941204 20088458.0 7676.0 nc|ENSG00000089597|Q14697-2|GANAB;;ENSG00000089597|ENST00000356638|GANAB 8.13126548131307 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7687 43.042 99.0 482970.0 25 0 36731.0 + 34168 SLMKRWSQL 9 78 574.8165266726921 1147.6185004121842 2 574.8176757693291 MULTI CID FTMS 0 0 0 7676 235701.578125 1.0 0 0.0 11 Unmodified _SLMKRWSQL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 21.53697664764585 0.2571576504437394 1 {[TV]|[{I|L}S]}MK{[SA]|[TG]}[KP]TW 10 6 {[TV]|[{I|L}S]} + + 26.661 22.843 11.415 2.3231 2.3231 49.222 0.0 0.0 0.0 0.0 0.4626593516915278 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.7302046884880937 {[TV]|[{I|L}S]}MK{[SA]|[TG]}[KP]TW 2.3231 - 105 + 1 2.133 42834.5 1.0 4174 3511 7676 DOHH2_400M_050219_1,7687 DOHH2_400M_050219_1,7687,SLMKRWSQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7688 43.045 159.0 405080.0 25 0 47366.0 + 13522 HNFIKVTL 8 104 486.2867638744936 0 486.2863342165947 PEAK CID FTMS 0 0 0 7676 205465.765625 1.0 0 0.0 12 Unmodified _HNFIKVTL_ ENSG00000104814|ENST00000396857|MAP4K1;nc|ENSG00000104814|Q92918|MAP4K1 25.399314129420983 0.3159236278339657 1 VK{I|L}{M(Oxidation (M))|F} 4 7 21.714 0.0 0.0 2.2373 0.0 0.0 232.1389358807772 248.0792940729125 480.2182299536897 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 VK{I|L}{M(Oxidation (M))|F} 2.2373 - 41 + 1 2.133 55852.4 1.0 4175 3511 7676 DOHH2_400M_050219_1,7688 DOHH2_400M_050219_1,7688,HNFIKVTL False True HNFIKVTL 43.045493 486.286334216595 1187393.5 7676.0 nc|ENSG00000104814|Q92918|MAP4K1;;ENSG00000104814|ENST00000396857|MAP4K1 4.469339847564697 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7689 43.052 369.0 459320.0 25 0 70210.0 37868 TLVQKVVSPY 10 134 567.3295759213604 1132.6445989095207 2 567.3293334841728 MULTI CID FTMS 0 0 0 7676 197155.234375 0.1578659353233268 -8 0.8600044250488281 13 Unmodified _TLVQKVVSPY_ ENSG00000186654|ENST00000336985|PRR5;ENST00000455389.3_1_22:45126703-45133124:+|nuORF;ENST00000495017.5_1_22:45127230-45133124:+|nuORF;nc|ENSG00000186654|P85299-2|PRR5;nc|ENSG00000186654|P85299-3|PRR5;nc|ENSG00000186654|P85299-4|PRR5;nc|ENSG00000186654|P85299-5|PRR5 3.944395688203298 0.708391353636983 1 Y 1 9 11.259 0.0 0.0 0.99405 0.0 0.0 951.5705460304176 0.0 951.5705460304176 0.0 1.426178642403748 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.99405 + + 27 + 1 2.133 131822.1 1.0 4176 3511 7676 DOHH2_400M_050219_1,7689 DOHH2_400M_050219_1,7689,TLVQKVVSPY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7690 43.066 800.0 158410.0 25 0 21779.0 + + -1 NTEDSSMSGYLY 12 149 683.7771988053892 1365.5398446775782 2 683.7776977419853 MULTI CID FTMS 0 0 0 7676 168865.796875 0.8723747418572844 -1 0.1269760131835937 14 Carbamidomethyl (C) _NTEEEPLPC(Carbamidomethyl (C))DY_ ENST00000451107.3_1_12:95475298-95611245:-|nuORF;ENSG00000180263|ENST00000343958|FGD6;nc|ENSG00000180263|Q6ZV73-2|FGD6 17.11289562659939 0.6791789249425932 1 {[QS]|[NT]}EDS{[MS]|[{M(Oxidation (M))|F}A]}[SG]Y[Y{I|L}] 12 -1 + 52.657 0.0 0.0 3.8561 3.8561 74.082 0.0 0.0 0.0 19.22265818471544 3.238839212801402 3.238839212801402 3.238839212801402 0 0.4247425010840047 1.3979400086720375 2.184982153003731 0.9269359821608808 {[QS]|[NT]}EDS{[MS]|[{M(Oxidation (M))|F}A]}[SG]Y[Y{I|L}];{[QS]|[NT]}EDS{[CP]|[EA]}[SG]Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}ED[HM]YY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}EDS{[MS]|[{M(Oxidation (M))|F}A]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][Y{I|L}];{[QS]|[NT]}ED[HM]E{[QS]|[NT]}[Y{I|L}];{[QS]|[NT]}E[C(Carbamidomethyl (C))Q]N[SG]Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y[SG]{[MS]|[{M(Oxidation (M))|F}A]}SDYY;{[QS]|[NT]}EDS{[MS]|[{M(Oxidation (M))|F}A]}{[C(Carbamidomethyl (C))E]|[WC]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}E[C(Carbamidomethyl (C))Q][{M(Oxidation (M))|F}E]Y[Y{I|L}];{[QS]|[NT]}E{[{M(Oxidation (M))|F}C]|[YS]}E{[QG]|[NA]}Y[Y{I|L}] 3.8561;3.6189;3.5355;3.2262;2.7051;2.6271;2.4484;2.4098;2.317;2.1153 -;-;-;-;-;-;-;-;-;- 1692 1 2.133 95179.6 0.75 4177 3511 7676 DOHH2_400M_050219_1,7690 DOHH2_400M_050219_1,7690,NTEEEPLPCDY False False NTEDSSMSGYLY 43.065982 683.777697741985 1240646.125 7676.0 ENST00000451107.3_1_12:95475298-95611245:-|nuORF;;ENSG00000180263|ENST00000343958|FGD6;;nc|ENSG00000180263|Q6ZV73-2|FGD6 7.120394070943196 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7691 43.073 420.0 680980.0 25 0 172590.0 42757 VVGAPRGR 8 149 406.248590729849 810.482628526498 2 406.2473937869072 MULTI CID FTMS 0 0 0 7676 154703.25 0.0268965821195208 -2 0.2393608093261718 15 Unmodified _VVGAPRGR_ ENSG00000204120|ENST00000373563|GIGYF2;ENST00000463554.5_1_2:233599907-233635753:+|nuORF;nc|ENSG00000204120|Q6Y7W6-3|GIGYF2;nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;nc|ENSG00000204120|Q6Y7W6-5|GIGYF2 0.7936320650641473 0.8195151834710337 1 P 1 7 7.3172 0.0 0.0 0.90282 0.0 0.0 695.4188142948559 0.0 695.4188142948559 0.0 2.713114017380475 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.90282 + + 21 + 1 2.133 223062.4 1.0 4178 3511 7676 DOHH2_400M_050219_1,7691 DOHH2_400M_050219_1,7691,VVGAPRGR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7692 43.078 192.0 296460.0 25 0 35093.0 + 32943 SELKGMASW 9 85 504.7442669365652 1007.4739809399304 2 504.7442199587822 MULTI CID FTMS 0 0 0 7676 147591.015625 0.5754040954593952 -1 0.1269760131835937 16 Unmodified _SELKGMASW_ ENSG00000053900|ENST00000315368|ANAPC4;nc|ENSG00000053900|Q9UJX5-2|ANAPC4;nc|ENSG00000053900|Q9UJX5-3|ANAPC4 22.736283301280096 0.2418982879461534 1 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KS{I|L}W{[ES]|[DT]|[{I|L}C]} 8 7 + 23.409 0.0 0.0 2.3236 2.3236 70.096 0.0 0.0 0.0 2.646905627783553 5.450397039808763 2.646905627783553 3.0102999566398125 0 0.0 0.0 0.3054621874040891 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KS{I|L}W{[ES]|[DT]|[{I|L}C]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SK{I|L}W{[ES]|[DT]|[{I|L}C]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}K{I|L}SW{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[RN]W;{[ES]|[DT]|[{I|L}C]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[RN]W;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KS{I|L}EG{[ES]|[DT]|[{I|L}C]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SK{I|L}EG{[ES]|[DT]|[{I|L}C]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}K{I|L}SEG{[ES]|[DT]|[{I|L}C]};{[CT]|[{M(Oxidation (M))|F}G]}[RN]{I|L}W{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}[C(Carbamidomethyl (C))K][W{I|L}]W 2.3236;2.0248;1.9242;1.8241;1.8241;1.7948;1.496;1.3954;1.2644;1.0651 -;-;-;-;-;-;-;-;-;- 176 1 2.133 50685.4 1.0 4179 3511 7676 DOHH2_400M_050219_1,7692 DOHH2_400M_050219_1,7692,SELKGMASW False True SELKGMASW 43.078324 504.744219958782 1260179.75 7676.0 ENSG00000053900|ENST00000315368|ANAPC4;;nc|ENSG00000053900|Q9UJX5-3|ANAPC4;;nc|ENSG00000053900|Q9UJX5-2|ANAPC4 3.3440089225769043 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7694 43.083 92.0 618000.0 25 0 89650.0 + 18550 LAAAVNRH 8 83 426.24642693354144 850.4783009338829 2 426.2459594607353 MULTI CID FTMS 0 0 0 7693 403452.75 0.2454654304954875 2 -0.2037544250488281 1 Unmodified _LAAAVNRH_ REV__ENST00000436411.5_1_7:107204485-107204728:+|nuORF;REV__ENST00000443233.5_1_7:107204485-107205092:+|nuORF 5.760428011301431 0.7893668129297577 1 V 1 -1 8.0989 0.0 0.0 0.95228 0.0 0.0 425.2188088645397 323.17148767642817 748.3902965409679 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V 0.95228 + + 3 + 1 2.133 47948.5 1.0 4180 3512 7693 DOHH2_400M_050219_1,7694 DOHH2_400M_050219_1,7694,LAAAVNRH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7695 43.085 58.0 873040.0 25 0 181110.0 -1 SSKKKISRS 9 67 531.8168122278975 1061.6190715225948 2 531.8170043826103 MULTI CID FTMS 0 0 0 7693 994634.9375 1.0 0 0.0 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SSKKKISRS_ AluSx1_dup30727|chr5:69334610-69334777:+|1.0296276175308208|0.0114292835436527|6.49|48.0|5|3|sense 2.059750862983233 0.8427793054688888 1 D 1 -1 6.9897 0.0 0.0 0.6584 0.0 0.0 216.1807913485698 727.3889864557249 943.5697778042947 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.6584 - 6 + 1 2.133 45248.2 1.0 4181 3512 7693 DOHH2_400M_050219_1,7695 DOHH2_400M_050219_1,7695,SSKKKISRS False False False False ERV PXD020620_cell_line DOHH2_400M_050219_1 7696 43.087 98.0 481140.0 25 0 92545.0 + 37741 TLRCKIGWI 9 74 545.3164559011491 1088.618358869098 2 545.3170043826103 MULTI CID FTMS 0 0 0 7693 565356.375 0.5124608687602604 3 -0.3294258117675781 3 Unmodified _TLRCKIGWI_ REV__ENSG00000145604|ENST00000274255|SKP2;REV__nc|ENSG00000145604|Q13309-4|SKP2 7.910154910731844 0.6385446671287552 1 K 1 -1 6.1092 0.0 0.0 0.56119 0.0 0.0 874.4862462976122 83.01452051334218 957.5007668109544 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 K 0.56119 + + 7 + 1 2.133 47108.7 1.0 4182 3512 7693 DOHH2_400M_050219_1,7696 DOHH2_400M_050219_1,7696,TLRCKIGWI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7697 43.089 131.0 664030.0 25 0 144720.0 39026 TVTIKVPA 8 95 414.7620822821761 827.5096116311522 2 414.7616454958916 MULTI CID FTMS 0 0 0 7693 550602.75 0.243471332897186 -1 0.0739364624023437 4 Unmodified _TVTIKVPA_ CON__Q2UVX4 2.302733041254933 0.8103549651115762 1 V 1 7 2.4743 0.0 0.0 0.299 0.0 0.0 413.2969479122053 312.1206148736938 725.4175627858991 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.299 + + 11 + 1 2.133 74149.3 1.0 4183 3512 7693 DOHH2_400M_050219_1,7697 DOHH2_400M_050219_1,7697,TVTIKVPA False False False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 7698 43.091 95.0 814090.0 25 0 97256.0 + 36821 TEKLHKIF 8 93 508.3002017309569 1014.585850528714 2 508.7975036501884 MULTI CID FTMS 0 0 0 7693 401316.03125 0.6675879493377879 2 -0.2037544250488281 5 Unmodified _TEKLHKIF_ REV__ENSG00000115568|ENST00000411696|ZNF142;REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF;REV__nc|ENSG00000115568|P52746|ZNF142 5.760428011301431 0.7893668129297577 1 {M(Oxidation (M))|F} 1 -1 12.764 0.0 0.0 1.2581 0.0 0.0 849.5065638849624 0.0 849.5065638849624 0.0 1.654966095207122 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2581 + + 27 + 1 2.133 61010.2 1.0 4184 3512 7693 DOHH2_400M_050219_1,7698 DOHH2_400M_050219_1,7698,TEKLHKIF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7699 43.094 131.0 478980.0 25 0 61060.0 16823 KHVLSERS 8 96 478.2693507050236 954.5241484768472 2 478.2695495486259 MULTI CID FTMS 0 0 0 7693 314759.46875 0.4998288465218278 -2 0.2009124755859375 6 Unmodified _KHVLSERS_ ENSG00000105053|ENST00000316763|VRK3;ENST00000594090.5_1_19:50491627-50519408:-|nuORF;ENST00000600284.5_1_19:50490096-50500767:-|nuORF;nc|ENSG00000105053|Q8IV63-2|VRK3;nc|ENSG00000105053|Q8IV63-3|VRK3 7.289230182591677 0.7800870086367542 1 W 1 8 11.783 0.0 0.0 1.2344 0.0 0.0 750.4343637862207 0.0 750.4343637862207 0.0 1.0559115200086389 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.2344 - 11 + 1 2.133 52728.3 1.0 4185 3512 7693 DOHH2_400M_050219_1,7699 DOHH2_400M_050219_1,7699,KHVLSERS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7700 43.1 333.0 167930.0 25 0 38702.0 40685 VLFLVVREGI 10 97 572.8559138518407 1143.6972747704813 2 572.8559448122978 MULTI CID FTMS 0 0 0 7693 194829.734375 1.0 0 0.0 7 Unmodified _VLFLVVREGI_ ENST00000548511.5_1_12:88429578-88437530:+|nuORF 2.9952420565917617 0.7127817445270067 1 Y 1 10 13.979 0.0 0.0 1.2223 0.0 0.0 962.623404996847 0.0 962.623404996847 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2223 - 22 + 1 2.133 49207.9 1.0 4186 3512 7693 DOHH2_400M_050219_1,7700 DOHH2_400M_050219_1,7700,VLFLVVREGI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7701 43.105 244.0 337930.0 25 0 44680.0 19806 LGVGRNRP 8 113 434.7594747082333 867.5043964832666 2 434.7593261599541 MULTI CID FTMS 0 0 0 7693 166626.796875 0.1952407575992031 2 -0.2037544250488281 8 Unmodified _LGVGRNRP_ ENST00000357736.8_1_17:79877633-79877984:-|nuORF 0.7936320650641473 0.8195151834710337 1 K 1 8 8.2133 0.0 0.0 0.94678 0.0 0.0 434.21299741275726 302.1761873834594 736.3891847962167 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.25 K 0.94678 - 2 + 1 2.133 71334.2 1.0 4187 3512 7693 DOHH2_400M_050219_1,7701 DOHH2_400M_050219_1,7701,LGVGRNRP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7702 43.113 463.0 199670.0 25 0 19377.0 + 10422 FTDEEGYGRYL 11 110 675.3038973051399 1348.5932416770795 2 675.3039428591728 MULTI CID FTMS 0 0 0 7693 123363.1875 1.0 0 0.0 9 Unmodified _FTDEEGYGRYL_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000446317.1_1_20:3471092-3471287:-|nuORF;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 80.6760300276096 0.0071538679453211 1 {M(Oxidation (M))|F}TDEEGY{[NV]|[RG]}Y{I|L} 11 0 + 82.3 0.0 0.0 6.1027 6.1027 89.919 0.0 0.0 0.0 52.13502721604006 2.7736607746618773 2.7736607746618773 10.823198202617988 0 1.25 0.0 1.6549471895720984 0.0 + + {M(Oxidation (M))|F}TDEEGY{[NV]|[RG]}Y{I|L};{M(Oxidation (M))|F}TDEWY{[NV]|[RG]}Y{I|L};{M(Oxidation (M))|F}TDEE[HT][Q{I|L}]{[ET]|[MV]};[{M(Oxidation (M))|F}T][Q{I|L}][WY]{M(Oxidation (M))|F}DTE;[{M(Oxidation (M))|F}T][Q{I|L}][WY]EDT{M(Oxidation (M))|F} 6.1027;5.3001;4.5624;3.2954;1.8653 +;-;-;-;- + 202 + 1 2.133 73162.7 1.0 4188 3512 7693 DOHH2_400M_050219_1,7702 DOHH2_400M_050219_1,7702,FTDEEGYGRYL True True FTDEEGYGRYL 43.112944 675.303942859173 842572.0625 7693.0 ENST00000446317.1_1_20:3471092-3471287:-|nuORF;;ENST00000470585.5_1_1:38445118-38455637:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 7.968639850616455 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7703 43.119 310.0 183530.0 25 0 28786.0 + + 24430 MGMERMPL 8 82 482.7236290656706 963.4327051981412 2 482.7243530154228 MULTI CID FTMS 0 0 0 7693 124918.4453125 0.7160501838226074 -2 0.2009124755859375 10 Unmodified _MGMNVWIN_ chr11:126304233-126306570|19|15.89|0.64|4.63|+|1|None,DCPS|2;ENST00000263579.4_1_11:126176468-126176510:+|nuORF 13.50788311687929 0.7113601687236069 1 MGMERMP{I|L} 8 -1 + 76.541 0.0 0.0 7.9446 7.9446 89.211 0.0 0.0 0.0 65.12058584992162 4.297652191727295 4.297652191727295 6.519862825870675 0 1.2302046884880935 1.3979400086720375 0.0 0.0 MGMERMP{I|L};MGMEVGMP{I|L};MG[KA]C(Carbamidomethyl (C))GMP{I|L};MG[RH]S{[ET]|[MV]}{M(Oxidation (M))|F};M[WM]VGMP{I|L};M[KQ]C(Carbamidomethyl (C))GMP{I|L};[KQ]MC(Carbamidomethyl (C))GMP{I|L};{[MG]|[TS]}{[RE]|[WV]}MMP{I|L} 7.9446;7.2678;5.3216;3.588;3.0698;2.7573;2.7573;1.7295 -;-;-;-;-;-;-;- 138 + 1 2.133 48774.4 1.0 4189 3512 7693 DOHH2_400M_050219_1,7703 DOHH2_400M_050219_1,7703,MGMNVWIN False False MGMERMPL 43.118586 482.7239 1620668.375 7693.0 chr11:126304233-126306570|19|15.89|0.64|4.63|+|1|None,DCPS|2;;ENST00000263579.4_1_11:126176468-126176510:+|nuORF 7.090952237447103 2.0 False 8.0 True non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_1 7704 43.131 743.0 251230.0 25 0 77504.0 12873 GVVSLIPLI 9 130 455.80100957036 909.58746620752 2 455.8012573122978 MULTI CID FTMS 0 0 0 7693 114488.8359375 0.2500771157672341 -1 0.0739364624023437 11 Unmodified _GVVSLIPLI_ ENSG00000165698|ENST00000356311|SPACA9;nc|ENSG00000165698|Q96E40-2|SPACA9 8.593279151180031 0.6146971463335029 1 A{I|L}R 3 8 13.188 0.0 0.0 1.4498 0.0 0.0 129.1008461897449 437.25400720767817 566.3548533974231 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}R 1.4498 - 131 + 1 2.133 146680.8 1.0 4190 3512 7693 DOHH2_400M_050219_1,7704 DOHH2_400M_050219_1,7704,GVVSLIPLI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7705 43.14 507.0 165660.0 25 0 15325.0 + -1 DLEMQYETL 9 130 579.254524541744 1156.494496150288 2 579.2543823122978 MULTI CID FTMS 0 0 0 7693 110001.484375 1.0 0 0.0 12 Oxidation (M) _DLEM(Oxidation (M))QYETL_ ENSG00000171403|ENST00000246662|KRT9;P35527 36.12702656103203 0.0967173616627612 1 {NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}QY 6 -1 36.145 0.0 0.0 3.1254 0.0 0.0 0.0 358.16237880093166 358.16237880093166 14.599257520318876 0.0 0.0 0.0 0 0.0 2.0 0.0 0.25 {NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}QY 3.1254 + + 313 1 2.133 66745.6 1.0 4191 3512 7693 DOHH2_400M_050219_1,7705 DOHH2_400M_050219_1,7705,DLEMQYETL False False DLEMQYETL 43.140403 579.254382312298 554358.4375 7693.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 6.213976701100667 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7706 43.146 291.0 360250.0 25 0 18371.0 + 7988 EMARKINFL 9 139 561.3100954398462 1120.6056379464924 2 561.3094360232353 MULTI CID FTMS 0 0 0 7693 105226.3515625 0.3072271961188703 -1 0.0739364624023437 13 Unmodified _EMARKINFL_ ENSG00000266472|ENST00000614145|MRPS21 56.17704186161178 0.0281986971544335 1 S{I|L}N{M(Oxidation (M))|F}{I|L} 5 5 45.842 0.0 0.0 4.0909 0.0 0.0 528.294725486525 0.0 528.294725486525 0.0 24.37149123612773 0.0 0.0 0 0.6861818737241735 0.0 1.2302046884880935 0.6747425010840047 S{I|L}N{M(Oxidation (M))|F}{I|L} 4.0909 - 835 1 2.133 82177.6 1.0 4192 3512 7693 DOHH2_400M_050219_1,7706 DOHH2_400M_050219_1,7706,EMARKINFL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7707 43.161 800.0 146360.0 25 0 16996.0 + + 35817 SAKLVSVL 8 157 408.7636540289421 815.5127551246843 2 408.7627441287041 MULTI CID FTMS 0 0 0 7693 94482.15625 1.0 0 0.0 14 Unmodified _SVKTGLVL_ ENST00000569745.5_1_15:43477607-43487036:+|nuORF;ENST00000563065.5_1_15:43477607-43487036:+|nuORF;ENST00000566515.5_1_15:43486293-43487036:+|nuORF;ENSG00000166946|ENST00000300213|CCNDBP1;nc|ENSG00000166946|O95273-3|CCNDBP1 30.22481116460888 0.4082965392918993 1 [Y{I|L}][VP]{I|L}V{I|L} 7 -1 + 25.251 0.0 0.0 3.0963 3.0963 81.033 0.0 0.0 0.0 6.254019516304222 10.64667259123027 6.254019516304222 14.39429419877569 0 0.5796896906561032 2.0 0.0 0.0 [Y{I|L}][VP]{I|L}V{I|L};{[SA]|[TG]}K[{I|L}V]SV{I|L};{[SA]|[TG]}K[VS]{I|L}V{I|L} 3.0963;1.3312;1.1002 -;-;- 71 1 2.133 94332.5 0.4099999964237213 4193 3512 7693 DOHH2_400M_050219_1,7707 DOHH2_400M_050219_1,7707,SVKTGLVL False False SAKLVSVL 43.160736 408.762744128704 446219.21875 7693.0 ENST00000569745.5_1_15:43477607-43487036:+|nuORF;;ENST00000563065.5_1_15:43477607-43487036:+|nuORF;;ENST00000566515.5_1_15:43486293-43487036:+|nuORF;;ENSG00000166946|ENST00000300213|CCNDBP1;;nc|ENSG00000166946|O95273-3|CCNDBP1 0.7292749087015787 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7708 43.175 800.0 174330.0 25 0 18846.0 -1 0 94 1031.4509768166308 3091.331101050093 3 1031.784838855267 MULTI CID FTMS 0 0 0 7693 147417.40625 0.0683655349232317 4 -0.4391670227050781 15 1 YT 2 -1 10.177 0.0 0.0 0.32922 0.0 0.0 2178.981702818732 645.2182711236936 2824.199973942425 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 YT 0.32922 - 1135 + 1 2.133 95140.1 0.4900000095367431 4194 3512 7693 DOHH2_400M_050219_1,7708 DOHH2_400M_050219_1,7708, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7709 43.188 800.0 162560.0 25 0 54084.0 + + -1 QEIEDRLNTW 10 118 652.3500325664489 0 652.3170043826103 PEAK CID FTMS 0 0 0 -1 0 16 Carbamidomethyl (C) _EQRRC(Carbamidomethyl (C))AKKEV_ ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 10.073929032068715 0.3742530088597855 1 {I|L}ED 3 -1 12.703 0.0 0.0 0.97514 0.0 0.0 257.1614451350138 685.3454073541624 942.5068524891764 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}ED 0.97514 - 61 + 1 2.133 101549.3 0.550000011920929 4195 3512 7693 DOHH2_400M_050219_1,7709 DOHH2_400M_050219_1,7709,EQRRCAKKEV False False QEIEDRLNTW 43.188431 652.31700438261 573905.8125 7693.0 ENST00000394768.6_2_14:64542710-64692241:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0-13|SYNE2;;nc|ENSG00000054654|Q8WXH0-7|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 5.707606474558513 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7710 43.194 253.0 589560.0 25 0 45808.0 -1 0 118 423.2734006300154 844.5322483268308 2 423.2725707888603 MULTI CID FTMS 0 0 0 7693 119310.0390625 0.5235973014845757 -1 0.0739364624023437 17 1 PPH{I|L}{I|L}R{I|L} 7 -1 + 61.335 0.0 0.0 7.2627 7.2627 84.541 0.0 0.0 0.0 35.13759790242446 11.86645088746296 11.86645088746296 3.0102999566398125 0 0.3807196863200844 0.9208187539523752 0.0 0.2614393726401688 PPH{I|L}{I|L}R{I|L};PP{I|L}H{I|L}R{I|L};P{I|L}PH{I|L}R{I|L};{I|L}PPH{I|L}R{I|L};{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}R{I|L} 7.2627;6.9062;5.0086;4.6522;3.5013 -;-;-;-;- 89 + 1 2.133 119625.2 1.0 4196 3512 7693 DOHH2_400M_050219_1,7710 DOHH2_400M_050219_1,7710, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7712 43.199 35.0 1066800.0 25 0 81794.0 + -1 PCPDRKCTY 9 76 570.2533709245473 1138.4921889158943 2 570.2539550662041 MULTI CID FTMS 0 0 0 7711 200009.34375 0.1110225188944561 2 -0.213470458984375 1 Carbamidomethyl (C) _PCPDRKC(Carbamidomethyl (C))TY_ REV__ENSG00000152661|ENST00000282561|GJA1 11.640296217721598 0.521594087909532 1 TY 2 -1 23.856 0.0 0.0 2.0954 0.0 0.0 856.3700424177376 0.0 856.3700424177376 0.0 3.709388396804794 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 TY 2.0954 + + 81 + 1 2.13 33496.5 1.0 4197 3513 7711 DOHH2_400M_050219_1,7712 DOHH2_400M_050219_1,7712,PCPDRKCTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7713 43.201 84.0 338060.0 25 0 41363.0 + -1 RFIVRPMP 8 61 516.2957957070188 1030.5770384808377 2 516.2960693240166 MULTI CID FTMS 0 0 0 7711 803537.8125 0.7217609442182966 2 -0.213470458984375 2 Oxidation (M) _RFIVRPM(Oxidation (M))P_ REV__ENSG00000136937|ENST00000375147|NCBP1 2.302733041254933 0.8103549651115762 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.13 28382.5 1.0 4198 3513 7711 DOHH2_400M_050219_1,7713 DOHH2_400M_050219_1,7713,RFIVRPMP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7714 43.202 31.0 1153500.0 25 0 90567.0 + 26413 NTDPSIVMTY 10 77 570.7657086553279 1139.5168643774557 2 570.7662841677666 MULTI CID FTMS 0 0 0 7711 1503606.0 0.5942108539079404 -1 0.1159553527832031 3 Unmodified _NTDPSIVMTY_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF 27.088373467376528 0.3600710273140457 1 TY 2 8 24.222 0.0 0.0 2.1256 0.0 0.0 857.3948931556712 0.0 857.3948931556712 0.0 1.5050889728633337 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + TY 2.1256 + + 128 + 1 2.13 32320.0 1.0 4199 3513 7711 DOHH2_400M_050219_1,7714 DOHH2_400M_050219_1,7714,NTDPSIVMTY False True NTDPSIVMTY 43.202354 570.766284167767 34770856.0 7711.0 ENST00000426186.1_3_2:87098444-87121919:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 6.321197668711345 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7715 43.204 89.0 856400.0 25 0 110410.0 + + 39759 DILPKKIL 8 78 470.3153857900182 938.6162186468364 2 470.3154479861259 MULTI CID FTMS 0 0 0 7711 628328.75 0.8247394094319593 1 -0.087799072265625 4 Unmodified _VELPKKLL_ ENSG00000104472|ENST00000220913|CHRAC1 39.957323273325 0.2350051964751539 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}PKK{I|L}{I|L} 8 -1 + 62.064 0.0 0.0 6.6123 6.6123 94.317 0.0 0.0 0.0 16.938200260161125 14.904630595263413 14.904630595263413 31.52494727195545 0 1.1989700043360187 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}PKK{I|L}{I|L};[KP]K{I|L}{I|L}D{I|L}{I|L};[KP]{I|L}K{I|L}D{I|L}{I|L};[KP]K{I|L}{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[KP]{I|L}K{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 6.6123;3.2536;2.7453;2.4348;1.9265 +;-;-;-;- + 99 + 1 2.13 63926.4 1.0 4200 3513 7711 DOHH2_400M_050219_1,7715 DOHH2_400M_050219_1,7715,VELPKKLL False False DILPKKIL 43.204319 470.315447986126 6595919.0 7711.0 ENSG00000104472|ENST00000220913|CHRAC1 2.969837188720703 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7716 43.207 135.0 756270.0 25 0 111000.0 + 25971 NLPPHIIRL 9 90 536.8345953440067 1071.6546377548134 2 536.8350097537041 MULTI CID FTMS 0 0 0 7711 531170.0625 1.0 0 0.0 5 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 27.22323531849824 0.1848086127304535 1 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}[R{I|L}] 9 0 + 67.598 0.0 0.0 6.3078 6.3078 92.629 0.0 0.0 0.0 52.99349368937584 7.504311474114331 7.504311474114331 20.255762612236907 0 0.9247425010840048 2.0 0.0 0.4247425010840047 + + {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}[R{I|L}] 6.3078;4.4176 +;- + 100 + 1 2.13 84956.2 1.0 4201 3513 7711 DOHH2_400M_050219_1,7716 DOHH2_400M_050219_1,7716,NLPPHIIRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7717 43.21 160.0 439300.0 25 0 54916.0 26315 NRLCKILDF 9 102 374.5428147850897 1120.6066149554692 3 374.5425292849541 MULTI CID FTMS 0 0 0 7711 334537.0 1.0 0 0.0 6 Unmodified _NRLCKILDF_ ENST00000395246.5_1_5:130694918-130695191:+|nuORF 7.910154910731844 0.6385446671287552 1 {I|L} 1 8 14.604 0.0 0.0 1.3032 0.0 0.0 989.5116727941396 0.0 989.5116727941396 0.0 4.392608977506036 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3032 + + 99 + 1 2.13 61535.6 1.0 4202 3513 7711 DOHH2_400M_050219_1,7717 DOHH2_400M_050219_1,7717,NRLCKILDF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7718 43.215 254.0 276550.0 25 0 21661.0 + 28838 QAFEKGLSL 9 110 496.7743099035062 991.5340668738124 2 496.7743102908134 MULTI CID FTMS 0 0 0 7711 224432.171875 1.0 0 0.0 7 Unmodified _QAFEKGLSL_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 53.832793166522166 0.0319663582346103 1 [QA]{M(Oxidation (M))|F}E 4 5 32.608 0.0 0.0 3.2886 0.0 0.0 0.0 513.3062838190061 513.3062838190061 5.235069977338704 0.0 0.0 0.0 0 0.5709991640913001 1.2218487496163564 0.3252574989159953 0.0 + [QA]{M(Oxidation (M))|F}E 3.2886 + + 526 + 1 2.13 57929.2 1.0 4203 3513 7711 DOHH2_400M_050219_1,7718 DOHH2_400M_050219_1,7718,QAFEKGLSL True True QAFEKGLSL 43.214923 496.774310290813 1187126.625 7711.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 4.623721440633138 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7719 43.221 354.0 257900.0 25 0 18968.0 -1 0 84 893.9125689496946 1785.810584966189 2 893.9128295779228 MULTI CID FTMS 0 0 0 7711 157367.21875 0.98615438152471 -1 0.1159553527832031 8 1 [MN]PN{I|L}NEEQ 9 -1 74.364 0.0 0.0 4.1641 0.0 0.0 0.0 713.3379225358724 713.3379225358724 48.662509289818416 0.0 0.0 0.0 0 0.7302046884880937 1.5228787452803376 0.0 1.1989700043360187 [MN]PN{I|L}NEEQ 4.1641 - 300 + 1 2.13 67808.5 1.0 4204 3513 7711 DOHH2_400M_050219_1,7719 DOHH2_400M_050219_1,7719, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7720 43.231 571.0 185750.0 25 0 13633.0 + 925 AFFGIVIVIT 10 149 540.3304540339666 1078.646355134733 2 540.3312866091728 MULTI CID FTMS 0 0 0 7711 134303.640625 0.6594436861927351 1 -0.087799072265625 9 Unmodified _AFFGIVIVIT_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 16.942295170755138 0.5632667538960775 1 {[QN]|[E{I|L}]|[KN]}[RH]V{I|L}V[{I|L}T] 9 -1 + 32.487 0.0 0.0 3.0119 3.0119 71.874 0.0 0.0 0.0 3.3062090524344327 7.147642715192511 3.3062090524344327 3.3062090524344327 0 0.3494850021680094 2.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[RH]V{I|L}V[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}VP[NP]{I|L}V[{I|L}T];{[TV]|[{I|L}S]}[KQ]YKV[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}[KT]YKV[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}RR[HA]V[{I|L}T];[TA][RK]YKV[{I|L}T];[PG][R{I|L}][NP]{I|L}V[{I|L}T];{[CP]|[EA]}KKYKV[{I|L}T] 3.0119;2.7054;1.7637;1.584;1.2885;0.58592;0.40885;0.39851 -;-;-;-;-;-;-;- 231 1 2.13 85884.7 1.0 4205 3513 7711 DOHH2_400M_050219_1,7720 DOHH2_400M_050219_1,7720,AFFGIVIVIT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7721 43.239 450.0 258640.0 25 0 15859.0 + 30554 RENIAIIESY 10 117 604.3197189317897 1206.6248849303793 2 604.3198730349541 MULTI CID FTMS 0 0 0 7711 119176.46875 0.7313021297550544 -1 0.1159553527832031 10 Unmodified _RENIAIIESY_ ENSG00000155561|ENST00000285968|NUP205 32.037481411007896 0.2488723560272515 1 {[QN]|[E{I|L}]|[KN]}[RN]A{I|L}{I|L}ESY 10 2 + 73.918 0.0 0.0 6.126 6.126 86.419 0.0 0.0 0.0 15.51415913489059 56.38235311828623 15.51415913489059 8.010299956639813 0 1.0 1.0457574905606752 0.4247425010840047 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}[RN]A{I|L}{I|L}ESY;{[QN]|[E{I|L}]|[KN]}[RN]A{I|L}{I|L}TDY;[HM]E{I|L}{I|L}[R{M(Oxidation (M))|F}]VY;[{I|L}T][RN][{I|L}A]{I|L}EDY;{[QS]|[NT]}[R{I|L}][{I|L}A]{I|L}EDY 6.126;5.4622;3.7867;1.5724;1.3841 -;-;-;-;- 261 1 2.13 85313.5 1.0 4206 3513 7711 DOHH2_400M_050219_1,7721 DOHH2_400M_050219_1,7721,RENIAIIESY False True RENIAIIESY 43.239369 604.319873034954 1036280.875 7711.0 ENSG00000155561|ENST00000285968|NUP205 4.09826382001241 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7722 43.253 800.0 181700.0 25 0 17104.0 -1 MYFWKRFCFWK 11 126 857.9015278765635 1713.7885028199269 2 857.9038574099541 MULTI CID FTMS 0 0 0 7711 116169.0625 0.0751503001960767 -6 0.6883125305175781 11 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 1 [MN]PN{I|L}NACMTDAN{I|L} 14 -1 93.63 0.0 0.0 5.4634 0.0 0.0 0.0 208.07319055728752 208.07319055728752 72.32782662711435 0.0 0.0 0.0 0 1.3979400086720375 1.5228787452803376 0.0 1.1549471895720984 [MN]PN{I|L}NACMTDAN{I|L} 5.4634 - 3497 + 1 2.13 96427.2 0.6800000071525574 4207 3513 7711 DOHH2_400M_050219_1,7722 DOHH2_400M_050219_1,7722,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7723 43.263 535.0 192550.0 25 0 22141.0 + 10439 FTEEQAVLY 9 133 550.2691266653113 1098.5237003974223 2 550.2694579958916 MULTI CID FTMS 0 0 0 7711 110543.125 0.1081212693840121 2 -0.213470458984375 12 Unmodified _FTEEQAVLY_ ENSG00000167881|ENST00000307877|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68 9.38312468134398 0.5871240394367778 1 [YE][DN]{I|L}AV{I|L}Y 9 5 [YE][DN]{I|L}AV + + 19.464 6.0869 0.75673 1.7718 1.7718 48.711 0.0 0.0 0.0 0.0 3.7281814298646734 0.0 0.0 0 0.0 0.0 0.0 0.0 [YE][DN]{I|L}AV{I|L}Y 1.7718 - 145 + 1 2.13 84210.9 1.0 4208 3513 7711 DOHH2_400M_050219_1,7723 DOHH2_400M_050219_1,7723,FTEEQAVLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7724 43.27 423.0 245090.0 25 0 16035.0 + 23350 LTDFIREEY 9 137 593.2923404804006 1184.5701280276012 2 593.2927123904228 MULTI CID FTMS 0 0 0 7711 104559.6328125 0.7270018521021272 -1 0.1159553527832031 13 Unmodified _LTDFIREEY_ ENSG00000185418|ENST00000335968|TARS3;nc|ENSG00000185418|A2RTX5-2|TARS3 47.594388314883695 0.0456443387682827 1 {I|L}TD{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 6 4 66.353 0.0 0.0 5.6014 0.0 0.0 0.0 445.2093905084594 445.2093905084594 41.57140670648974 0.0 0.0 0.0 0 0.6421590589602533 2.0 0.0 0.0 {I|L}TD{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 5.6014 - 297 + 1 2.13 81676.7 1.0 4209 3513 7711 DOHH2_400M_050219_1,7724 DOHH2_400M_050219_1,7724,LTDFIREEY True True LTDFIREEY 43.270187 593.292712390423 782717.0 7711.0 nc|ENSG00000185418|A2RTX5-2|TARS3;;ENSG00000185418|ENST00000335968|TARS3 6.128767649332683 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7725 43.274 100.0 535530.0 25 0 35369.0 29533 QLMYWPEVI 9 86 589.7985786342849 1177.5826043353698 2 589.7993652224541 MULTI CID FTMS 0 0 0 7711 309413.90625 0.9110864729504834 -1 0.1159553527832031 14 Unmodified _QLMYWPEVI_ ENSG00000188649|ENST00000646931|CC2D2B 21.74664581756881 0.2544899275067181 1 [Q{I|L}]M 3 6 38.512 0.0 0.0 3.2704 0.0 0.0 0.0 802.3778009629763 802.3778009629763 24.532796692927263 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + [Q{I|L}]M 3.2704 + + 108 + 1 2.13 47594.9 1.0 4210 3513 7711 DOHH2_400M_050219_1,7725 DOHH2_400M_050219_1,7725,QLMYWPEVI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7726 43.278 241.0 308780.0 25 0 30275.0 40707 VLGLQAPT 8 96 399.738210186434 0 399.7381774783134 PEAK CID FTMS 0 0 0 7711 189563.296875 0.6206506040318996 -1 0.1159553527832031 15 Unmodified _VLGLQAPT_ AluSq2_dup37911|chr11:61029213-61029516:+|2.3265821740550647|0.1118017475140091|4.38|48.0|19|3|anti-sense 0.7936320650641473 0.5979579398327216 1 {M(Oxidation (M))|F} 1 8 0.71334 0.0 0.0 0.089451 0.0 0.0 534.3095064550961 113.06131921939686 647.370825674493 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.089451 - 1 + 1 2.13 63752.6 1.0 4211 3513 7711 DOHH2_400M_050219_1,7726 DOHH2_400M_050219_1,7726,VLGLQAPT False False False False ERV PXD020620_cell_line DOHH2_400M_050219_1 7727 43.282 197.0 196770.0 25 0 26580.0 + 39627 VDSIILKRY 9 76 553.8305350476262 1105.6465171620523 2 553.8306762576103 MULTI CID FTMS 0 0 0 7711 174580.015625 0.4489870194207185 3 -0.323211669921875 16 Unmodified _VDSIILKRY_ REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-5|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN 1.844237919475145 0.850302753031785 1 Y 1 -1 13.495 0.0 0.0 1.2205 0.0 0.0 924.5720065192774 0.0 924.5720065192774 0.0 6.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2205 + + 14 + 1 2.13 35620.8 1.0 4212 3513 7711 DOHH2_400M_050219_1,7727 DOHH2_400M_050219_1,7727,VDSIILKRY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7729 43.287 24.0 2068700.0 25 0 471740.0 23908 LVNAYKLQP 9 67 523.3034874834204 1044.5924220336408 2 523.3038207888603 MULTI CID FTMS 0 0 0 7728 2379084.0 0.8359343507256762 2 -0.23541259765625 1 Unmodified _LVNAYKLQP_ ENSG00000152223|ENST00000282041|EPG5;ENST00000585906.5_1_18:43437816-43497657:-|nuORF;nc|ENSG00000152223|Q9HCE0-2|EPG5 4.3292370932331545 0.7635526921153418 1 W 1 9 2.4743 0.0 0.0 0.23686 0.0 0.0 626.9743933244596 228.51307092838127 855.4874642528408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.23686 - 3 + 1 2.13 43980.0 1.0 4213 3514 7728 DOHH2_400M_050219_1,7729 DOHH2_400M_050219_1,7729,LVNAYKLQP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7730 43.289 69.0 1469600.0 25 0 104710.0 + 25965 NLPPHIIRL 9 95 358.2254054873107 1071.6543870621322 3 358.2254211306572 MULTI CID FTMS 0 0 0 7728 899161.9375 0.7723121730853018 1 -0.12567138671875 2 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 17.44264345198275 0.3645313841742926 1 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}[R{I|L}] 9 0 + 61.616 0.0 0.0 5.7496 5.7496 80.271 0.0 0.0 0.0 48.85201517388548 5.642492736872597 5.642492736872597 3.0102999566398125 0 0.2742275032520141 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PP{I|L}H{I|L}[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PH{I|L}[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PPH{I|L}[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}R{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PP{I|L}HR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PHR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PPHR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}R{I|L}{I|L} 5.7496;5.4687;5.1878;4.9069;4.8824;4.6015;4.3206;4.0397;3.9999;3.1327 +;-;-;-;-;-;-;-;-;- + 142 + 1 2.13 89080.2 1.0 4214 3514 7728 DOHH2_400M_050219_1,7730 DOHH2_400M_050219_1,7730,NLPPHIIRL False True NLPPHIIRL 43.288522 358.225421130657 53290999.0 7728.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 5.391411304473877 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7731 43.29 71.0 743200.0 25 0 127160.0 13139 HFIKEINV 8 70 500.2827811471595 998.551009361119 2 500.2828552126884 MULTI CID FTMS 0 0 0 7728 793652.125 0.5643627043756037 3 -0.311798095703125 3 Unmodified _HFIKEINV_ ENST00000546751.1_1_12:62974148-62979324:+|nuORF 2.302733041254933 0.8103549651115762 1 {I|L} 1 7 9.6777 0.0 0.0 0.96918 0.0 0.0 867.4558383179534 0.0 867.4558383179534 0.0 0.3808786795395029 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.96918 + + 5 + 1 2.13 45822.9 1.0 4215 3514 7728 DOHH2_400M_050219_1,7731 DOHH2_400M_050219_1,7731,HFIKEINV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7732 43.292 104.0 791750.0 25 0 183220.0 -1 YLKTKFICV 9 87 391.22429162341535 0 391.2250244021416 PEAK CID FTMS 0 0 0 7728 614872.0 1.0 0 0.0 4 Carbamidomethyl (C) _YLKTKFIC(Carbamidomethyl (C))V_ ENSG00000168610|ENST00000264657|STAT3;ENST00000462269.1_1_17:40467765-40469390:-|nuORF;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3 1.1933415558491238 0.3444685223463735 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.13 70349.3 1.0 4216 3514 7728 DOHH2_400M_050219_1,7732 DOHH2_400M_050219_1,7732,YLKTKFICV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7733 43.295 115.0 423750.0 25 0 39025.0 5984 DREDLVEL 8 87 494.7510170330915 987.487481132983 2 494.7512390017509 MULTI CID FTMS 0 0 0 7728 346463.34375 1.0 0 0.0 5 Unmodified _DREDLVEL_ ENSG00000022976|ENST00000442396|ZNF839;nc|ENSG00000022976|A8K0R7-2|ZNF839;nc|ENSG00000022976|A8K0R7|ZNF839 30.22481116460888 0.4082965392918993 1 E{I|L} 2 6 19.949 0.0 0.0 2.0201 0.0 0.0 727.3495549628643 0.0 727.3495549628643 0.0 4.168905970787442 0.0 0.0 0 0.0 0.0 0.5 0.0 + E{I|L} 2.0201 + + 56 + 1 2.13 43667.0 1.0 4217 3514 7728 DOHH2_400M_050219_1,7733 DOHH2_400M_050219_1,7733,DREDLVEL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7734 43.298 161.0 439370.0 25 0 36689.0 + + 43914 YGMPRQIL 8 112 489.2655591744022 976.5165654156044 2 489.2654296755791 MULTI CID FTMS 0 0 0 7728 251032.28125 0.2119796873997237 -2 0.2037544250488281 6 Unmodified _YGFGRPAPL_ ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2;ENST00000478033.1_1_1:159888592-159888742:-|nuORF 23.1484247019978 0.2366544122328345 1 YGMP 4 -1 47.563 0.0 0.0 4.8707 0.0 0.0 0.0 525.3183077447874 525.3183077447874 24.28229000258544 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 YGMP 4.8707 - 106 + 1 2.13 56389.4 1.0 4218 3514 7728 DOHH2_400M_050219_1,7734 DOHH2_400M_050219_1,7734,YGFGRPAPL False False YGMPRQIL 43.297981 489.265429675579 17401680.0 7728.0 ENSG00000158710|ENST00000368097|TAGLN2;;nc|ENSG00000158710|P37802-2|TAGLN2;;ENST00000478033.1_1_1:159888592-159888742:-|nuORF 5.277509689331055 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7735 43.306 423.0 209380.0 25 0 20026.0 + 37117 TGYLNTVTV 9 131 484.257942378937 0 484.2584106326103 PEAK CID FTMS 0 0 0 7728 203119.703125 1.0 0 0.0 7 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 43.85829265575387 0.0484669621479465 1 TN{I|L}CT 5 6 37.039 0.0 0.0 3.8323 0.0 0.0 317.19348391081286 114.05665765933828 431.25014157015113 0.0 0.0 0.0 0.0 0 0.0 0.0 1.110924374808178 0.4247425010840047 TN{I|L}CT 3.8323 - 310 + 1 2.13 70975.6 1.0 4219 3514 7728 DOHH2_400M_050219_1,7735 DOHH2_400M_050219_1,7735,TGYLNTVTV True True TGYLNTVTV 43.305518 484.25841063261 1325074.125 7728.0 ENSG00000204628|ENST00000512805|RACK1;;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 6.07387129465739 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7736 43.311 297.0 304100.0 25 0 22232.0 + 24344 MELPHGGEGW 10 116 556.7457002935879 1111.4768476539757 2 556.7455322146416 MULTI CID FTMS 0 0 0 7728 198453.28125 0.174566323770535 -2 0.2037544250488281 8 Unmodified _MELPHGGEGW_ ENSG00000127564|ENST00000262300|PKMYT1;ENST00000575981.1_1_16:3022956-3024767:-|nuORF;nc|ENSG00000127564|Q99640-2|PKMYT1;nc|ENSG00000127564|Q99640-3|PKMYT1;nc|ENSG00000127564|Q99640-4|PKMYT1 99.79894945604345 0.0086314121850342 1 ME{[CT]|[{M(Oxidation (M))|F}G]}{I|L}G{[ES]|[DT]|[{I|L}C]}GW 10 4 + 70.169 0.0 0.0 6.3131 6.3131 81.23 0.0 0.0 0.0 15.323192304054544 0.1760624017703094 0.1760624017703094 2.3227123303956887 0 1.424742501084005 1.6989700043360187 1.1307196863200843 0.0 ME{[CT]|[{M(Oxidation (M))|F}G]}{I|L}G{[ES]|[DT]|[{I|L}C]}GW;ME{I|L}PHM[HA]{M(Oxidation (M))|F};ME{[CT]|[{M(Oxidation (M))|F}G]}{I|L}G{[WS]|[C(Carbamidomethyl (C)){I|L}]}W;ME{[CT]|[{M(Oxidation (M))|F}G]}G{I|L}{[ES]|[DT]|[{I|L}C]}GW;ME{[CT]|[{M(Oxidation (M))|F}G]}G{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}W;ME{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}GW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}M{M(Oxidation (M))|F}[KA]GW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}M[KS]MGW;M{M(Oxidation (M))|F}{I|L}WG{[ES]|[DT]|[{I|L}C]}GW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}M{M(Oxidation (M))|F}[KQ]W 6.3131;6.1041;5.885;5.8839;5.4557;5.4328;5.281;4.8628;4.7494;4.6546 -;-;-;-;-;-;-;-;-;- 1749 + 1 2.13 73244.5 1.0 4220 3514 7728 DOHH2_400M_050219_1,7736 DOHH2_400M_050219_1,7736,MELPHGGEGW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7737 43.318 419.0 414370.0 25 0 52865.0 + 1578 ALLERGYSL 9 149 511.28795600292017 1020.5613590726404 2 511.2876464724541 MULTI CID FTMS 0 0 0 7728 162222.765625 0.1124197780973838 -2 0.2037544250488281 9 Unmodified _ALLERGYSL_ ENSG00000182199|ENST00000328923|SHMT2;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 74.19965305603844 0.0194755241623067 1 A{I|L}{I|L}ET{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L} 9 3 + 87.207 0.0 0.0 8.545 8.545 96.22 0.0 0.0 0.0 36.56295947543775 14.09256854528806 14.09256854528806 16.197887582883936 0 1.6861818737241734 2.0 1.0044321917401078 0.0 A{I|L}{I|L}ET{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L};A{I|L}{I|L}[KC]HHS{I|L};A{I|L}{I|L}ET{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TV;A{I|L}{I|L}E[KS][{M(Oxidation (M))|F}T]{I|L};[{I|L}A]{I|L}ERGYS{I|L};A{I|L}{I|L}EE[RK]Y;A{I|L}[{M(Oxidation (M))|F}V]R{[ES]|[DT]|[{I|L}C]}S{I|L};[{I|L}A]{I|L}{[NV]|[RG]}EYS{I|L};A{I|L}[{M(Oxidation (M))|F}V]P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L};A{I|L}{I|L}[KC]HHTV 8.545;6.9578;6.9122;6.806;6.4265;6.2561;5.9185;5.7459;5.451;5.3251 -;-;-;-;+;-;-;-;-;- + 1623 + 1 2.13 134423.6 1.0 4221 3514 7728 DOHH2_400M_050219_1,7737 DOHH2_400M_050219_1,7737,ALLERGYSL True True ALLERGYSL 43.318441 511.287646472454 17876180.0 7728.0 ENST00000553837.5_1_12:57625333-57628141:+|nuORF;;ENSG00000182199|ENST00000328923|SHMT2;;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;;nc|ENSG00000182199|P34897-2|SHMT2;;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;;nc|ENSG00000182199|P34897-3|SHMT2;;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 5.733203252156575 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7738 43.332 800.0 149540.0 25 0 16194.0 -1 0 132 959.1135481789956 2874.318815137187 3 959.4470092654228 MULTI CID FTMS 0 0 0 7728 109288.3203125 0.0511467995436075 -8 0.8568992614746094 10 1 [MN]W[VP]VMTW 9 -1 50.2 0.0 0.0 1.7465 0.0 0.0 0.0 1726.777286166737 1726.777286166737 9.859304977541356 0.0 0.0 0.0 0 0.5 2.0 0.3494850021680094 1.035666875892183 [MN]W[VP]VMTW 1.7465 - 11060 1 2.13 83010.3 0.5899999737739563 4222 3514 7728 DOHH2_400M_050219_1,7738 DOHH2_400M_050219_1,7738, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7739 43.346 800.0 130330.0 25 0 21538.0 -1 RCHRRRRRCCC 11 103 866.9070431313726 1731.799533329545 2 867.3990356326103 MULTI CID FTMS 0 0 0 7728 100591.25 0.0095005102009976 15 -1.533733367919922 11 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 1 [NP]{I|L}DWT[HN]AD{I|L}NP[EP] 15 -1 + 81.341 0.0 0.0 4.6969 4.6969 80.189 0.0 0.0 0.0 12.956930342909033 62.40085961185265 12.956930342909033 6.690067809585756 0 0.0 1.0969100130080565 1.274227503252014 0.3807196863200844 [NP]{I|L}DWT[HN]AD{I|L}NP[EP];[NP]{I|L}DWT[HN]W{I|L}NP[EP];[NP]{I|L}DWT[HN]AD{I|L}NV[HS];[NP]{I|L}DWT[HN]AD{I|L}PN[EP];[NP]{I|L}DWT[HN]AD{I|L}GGP[EP];[NP]{I|L}DWT[HN]W{I|L}NV[HS];[NP]{I|L}DWT[HN]W{I|L}PN[EP];[NP]{I|L}D{[DA]|[EG]}T[HN]W{I|L}NP[EP];[NP]{I|L}DWT[HN]W{I|L}GGP[EP];[NP]{I|L}D{[DA]|[EG]}T[HN]AD{I|L}NV[HS] 4.6969;4.3106;4.2679;4.2016;4.1754;3.8816;3.8153;3.788;3.788;3.7464 -;-;-;-;-;-;-;-;-;- 1035 1 2.13 71896.2 0.6000000238418579 4223 3514 7728 DOHH2_400M_050219_1,7739 DOHH2_400M_050219_1,7739,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7740 43.36 800.0 92575.0 25 0 5667.8 + 32694 SEAAHQGVITW 11 103 599.79661738787 1197.57868184254 2 599.7964965701103 MULTI CID FTMS 0 0 0 7728 91453.015625 0.9944678940507284 1 -0.12567138671875 12 Unmodified _SEAAHQGVITW_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 23.80106514851385 0.5333463718001408 1 {I|L}VGQ[YQ]W 7 9 29.953 0.0 0.0 2.5011 0.0 0.0 305.13641191402854 0.0 305.13641191402854 0.0 17.18892252373326 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}VGQ[YQ]W 2.5011 - 199 + 1 2.13 56267.9 0.5699999928474426 4224 3514 7728 DOHH2_400M_050219_1,7740 DOHH2_400M_050219_1,7740,SEAAHQGVITW False True SEAAHQGVITW 43.359968 599.7975 791536.5 7728.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 7.738594849904378 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7741 43.365 192.0 233830.0 25 0 28197.0 + 41490 VPMFLLATL 9 82 502.7966328102753 1003.5787126873506 2 502.7952453494072 MULTI CID FTMS 0 0 0 7728 175016.984375 0.9697381874408582 -2 0.2037544250488281 13 Unmodified _VPMFLLATL_ REV__ENSG00000105641|ENST00000222248|SLC5A5 4.75600775471527 0.7486543447549536 1 {I|L} 1 -1 12.218 0.0 0.0 1.2175 0.0 0.0 872.4836484557085 0.0 872.4836484557085 0.0 0.2287874528033739 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2175 + + 5 + 1 2.13 37090.8 1.0 4225 3514 7728 DOHH2_400M_050219_1,7741 DOHH2_400M_050219_1,7741,VPMFLLATL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7742 43.379 800.0 101810.0 25 0 28385.0 5423 DLLSFIRRHPW 11 100 720.4016745866455 0 720.4004394412041 PEAK CID FTMS 0 0 0 7728 140062.375 1.0 0 0.0 14 Unmodified _DLLSFIRRHPW_ ENST00000467075.1_1_1:24018334-24018445:+|nuORF 3.2813086475875832 0.4761840153648598 1 C(Carbamidomethyl (C)) 1 11 3.9794 0.0 0.0 0.27658 0.0 0.0 542.6548983902848 733.0808667137532 1275.735765104038 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.27658 - 4 + 1 2.13 63921.7 0.6399999856948853 4226 3514 7728 DOHH2_400M_050219_1,7742 DOHH2_400M_050219_1,7742,DLLSFIRRHPW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7743 43.393 800.0 304140.0 25 0 39612.0 -1 0 195 396.8017528249279 791.5889527166557 2 396.8014099001884 MULTI CID FTMS 0 0 0 7728 123017.625 0.606807805827742 -1 0.087799072265625 15 1 {I|L}{I|L}{I|L} 3 -1 28.817 0.0 0.0 3.6404 0.0 0.0 0.0 449.3131875417373 449.3131875417373 13.33256749368834 0.0 0.0 0.0 0 0.5629529932484498 0.0 0.0 0.0 {I|L}{I|L}{I|L} 3.6404 - 98 + 1 2.13 186753.3 0.4600000083446502 4227 3514 7728 DOHH2_400M_050219_1,7743 DOHH2_400M_050219_1,7743, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7744 43.408 800.0 283420.0 25 0 15510.0 -1 0 169 901.446881946423 1800.879210959646 2 901.4457885622978 MULTI CID FTMS 0 0 0 7728 114806.65625 0.4708766730574916 -1 0.087799072265625 16 1 N{I|L}PN{I|L}NAD[TP]E{I|L}Y{I|L}{[QS]|[NT]} 16 -1 + 138.31 0.0 0.0 7.6803 7.6803 90.586 0.0 0.0 0.0 46.545552742896064 17.901531167026477 17.901531167026477 9.013902021140495 0 2.527310937020445 2.0 1.8996498648046136 2.33889035263304 N{I|L}PN{I|L}NAD[TP]E{I|L}Y{I|L}{[QS]|[NT]};N{I|L}PN{I|L}GGAD[TP]E{I|L}Y{I|L}{[QS]|[NT]};N{I|L}PGG{I|L}NAD[TP]E{I|L}Y{I|L}{[QS]|[NT]};N{I|L}PN{I|L}NW[HS]C{I|L}Y{I|L}{[QS]|[NT]};N{I|L}PN{I|L}[EP]DRQDY{I|L}{[QS]|[NT]};N{I|L}PN{I|L}NADQGY{M(Oxidation (M))|F}VV[HT];N{I|L}PN{I|L}NA[WM][HT]Y{I|L}{[QS]|[NT]};N{I|L}PN{I|L}GGW[HS]C{I|L}Y{I|L}{[QS]|[NT]};N{I|L}PGG{I|L}NW[HS]C{I|L}Y{I|L}{[QS]|[NT]};N{I|L}PN{I|L}NADQ[{I|L}T]DHV[HT] 7.6803;7.1798;7.1798;6.9503;6.8725;6.6206;6.5225;6.4488;6.4488;6.3989 -;-;-;-;-;-;-;-;-;- 117629 + 1 2.13 153710.1 0.550000011920929 4228 3514 7728 DOHH2_400M_050219_1,7744 DOHH2_400M_050219_1,7744, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7746 43.413 22.0 1692800.0 25 0 401340.0 42126 VRRLPGGG 8 51 406.248590729849 810.482628526498 2 406.2485229372978 MULTI CID FTMS 0 0 0 7745 2008625.375 0.3492179856986905 2 -0.186126708984375 1 Unmodified _VRRLPGGG_ ENST00000497505.5_1_2:203879615-203880929:+|nuORF 0.0 0.8243325171867699 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.13 38232.8 1.0 4229 3515 7745 DOHH2_400M_050219_1,7746 DOHH2_400M_050219_1,7746,VRRLPGGG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7747 43.414 49.0 854890.0 25 0 197850.0 + 11591 GKPSLLLT 8 62 414.7620822821761 827.5096116311522 2 414.7617370486259 MULTI CID FTMS 0 0 0 7745 881818.4375 0.3899317799474103 2 -0.186126708984375 2 Unmodified _GKPSLLLT_ REV__ENSG00000185522|ENST00000329451|LMNTD2;REV__ENST00000469990.1_1_11:555480-556365:-|nuORF 0.6903765706972694 0.8201419426409876 1 P 1 -1 0.71334 0.0 0.0 0.086203 0.0 0.0 607.3780025997054 120.05057703189686 727.4285796316022 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.086203 + + 2 + 1 2.13 38191.5 1.0 4230 3515 7745 DOHH2_400M_050219_1,7747 DOHH2_400M_050219_1,7747,GKPSLLLT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7748 43.416 81.0 557500.0 25 0 116800.0 -1 KVFRPRML 8 64 531.8168122278975 1061.6190715225948 2 531.8170654177666 MULTI CID FTMS 0 0 0 7745 721683.625 0.725576387668365 3 -0.2783622741699219 3 Oxidation (M) _KVFRPRM(Oxidation (M))L_ ENST00000542475.2_2_17:6555824-6555875:+|nuORF 0.6903765706972694 0.8201419426409876 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.13 39577.3 1.0 4231 3515 7745 DOHH2_400M_050219_1,7748 DOHH2_400M_050219_1,7748,KVFRPRML False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7749 43.417 67.0 856960.0 25 0 79075.0 + 6996 EEIPVSSHYF 10 83 604.2851209303693 1206.5556889275383 2 604.2855102419853 MULTI CID FTMS 0 0 0 7745 638981.5 0.9004911712052918 -1 0.12567138671875 4 Unmodified _EEIPVSSHYF_ ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 43.85829265575387 0.1168243637355526 1 EE{I|L}PVSSH{M(Oxidation (M))|F}Y 10 2 + 64.831 0.0 0.0 5.3732 5.3732 88.083 0.0 0.0 0.0 42.704262829037845 11.00833760139686 11.00833760139686 13.769085551124682 0 0.5 1.6989700043360187 0.4247425010840047 0.0 EE{I|L}PVSSH{M(Oxidation (M))|F}Y;[VP]E[PG]C(Carbamidomethyl (C))VP{I|L}[HC];EE{I|L}PVS{[{M(Oxidation (M))|F}H]|[RQ]}SY;EE{I|L}P[KC]P[QT]Y;EE{I|L}P[KC]PAASY;EE{I|L}PVS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]E[PG][CG]VP{I|L}[HC];[HS]SVP[KC]P{I|L}[HC];EE{I|L}P[KC][{I|L}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[DP]{I|L}[PG]C(Carbamidomethyl (C))VP{I|L}[HC] 5.3732;4.232;4.1343;4.0941;3.8103;3.4893;3.4754;3.2891;2.8699;2.5802 -;-;-;-;-;-;-;-;-;- 329 + 1 2.13 46828.9 1.0 4232 3515 7745 DOHH2_400M_050219_1,7749 DOHH2_400M_050219_1,7749,EEIPVSSHYF True True EEIPVSSHYF 43.41733 604.285510241985 4658297.5 7745.0 ENST00000558825.5_1_15:91337395-91358506:+|nuORF;;ENSG00000197299|ENST00000355112|BLM;;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 6.730471769968669 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7750 43.419 85.0 658060.0 25 0 93146.0 + -1 VLCPPELK 8 85 478.2693507050236 954.5241484768472 2 478.2696716189384 MULTI CID FTMS 0 0 0 7745 569273.8125 0.9039901934863026 1 -0.1097412109375 5 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))PPELK_ REV__ENSG00000142207|ENST00000382751|URB1 2.889219685676258 0.8067950007271085 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.13 49159.6 1.0 4233 3515 7745 DOHH2_400M_050219_1,7750 DOHH2_400M_050219_1,7750,VLCPPELK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7751 43.422 152.0 392490.0 25 0 92623.0 20 AAAISTSRVLT 11 70 545.3164559011491 1088.618358869098 2 545.3172485232353 MULTI CID FTMS 0 0 0 7745 454007.125 0.4115296050227578 6 -0.4658088684082031 6 Unmodified _AAAISTSRVLT_ ENSG00000198301|ENST00000356260|SDAD1;ENST00000395710.5_1_4:76871905-76902632:-|nuORF;nc|ENSG00000198301|Q9NVU7-2|SDAD1 1.3295316138638542 0.8688751186870782 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.13 51260.5 1.0 4234 3515 7745 DOHH2_400M_050219_1,7751 DOHH2_400M_050219_1,7751,AAAISTSRVLT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7752 43.425 123.0 286630.0 25 0 23691.0 + 26313 NRKDDVKI 8 67 494.28266431100514 986.5507756888104 2 494.2826415896416 MULTI CID FTMS 0 0 0 7745 347731.75 1.0 0 0.0 7 Unmodified _NRKDDVKI_ REV__ENST00000492017.3_1_15:90749834-90750065:+|nuORF 5.230669730166228 0.792582437072536 1 {I|L} 1 -1 15.485 0.0 0.0 1.5696 0.0 0.0 855.4558182686916 0.0 855.4558182686916 0.0 15.395906230238124 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5696 + + 4 + 1 2.13 33521.8 1.0 4235 3515 7745 DOHH2_400M_050219_1,7752 DOHH2_400M_050219_1,7752,NRKDDVKI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7753 43.428 137.0 635600.0 25 0 53969.0 + 6484 EAHVAAEVI 9 112 469.7512117522367 937.4878705712734 2 469.7507812380791 MULTI CID FTMS 0 0 0 7745 267188.21875 1.0 0 0.0 8 Unmodified _EAHVAAEVI_ REV__ENSG00000152223|ENST00000282041|EPG5;REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF;REV__nc|ENSG00000152223|Q9HCE0-2|EPG5 21.74664581756881 0.2544899275067181 1 {[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}[YR]M 7 -1 + 22.367 0.0 0.0 2.3859 2.3859 67.724 0.0 0.0 0.0 1.2797694079037605 1.2797694079037605 1.2797694079037605 1.2797694079037605 0 0.2614393726401688 0.9208187539523752 0.2059771852360797 0.0 {[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}[YR]M;{[CP]|[EA]}[HQ]{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]A[{I|L}P]M;{[QN]|[E{I|L}]|[KN]}[HQ]AVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HA]R[VP]M;{NN|[MP]|[D{I|L}]|[EV]}[HA]R{I|L}[DV];{[CP]|[EA]}[R{I|L}][YR]M;{NN|[MP]|[D{I|L}]|[EV]}[HA]AAVE{I|L};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}[HV][DV];{[CP]|[EA]}[HQ]V{I|L}E{I|L} 2.3859;2.2493;2.233;2.0635;1.7039;1.7039;1.505;1.4798;1.3906;1.286 -;-;-;-;-;-;-;-;-;- 637 1 2.13 68637.5 1.0 4236 3515 7745 DOHH2_400M_050219_1,7753 DOHH2_400M_050219_1,7753,EAHVAAEVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7754 43.431 152.0 418500.0 25 0 68040.0 + 29402 QLDRISVYY 9 94 578.8026538022308 1155.5907546712615 2 578.8028442263603 MULTI CID FTMS 0 0 0 7745 252479.578125 1.0 0 0.0 9 Unmodified _QLDRISVYY_ ENSG00000196230|ENST00000327892|TUBB;ENST00000518096.1_1_8:30209523-30210210:+|nuORF 47.74868867922204 0.0453060283459952 1 VYY 3 6 30.93 0.0 0.0 2.6765 0.0 0.0 712.3864002912125 0.0 712.3864002912125 0.0 13.861147182067905 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + VYY 2.6765 + + 48 1 2.13 51504.0 1.0 4237 3515 7745 DOHH2_400M_050219_1,7754 DOHH2_400M_050219_1,7754,QLDRISVYY True True QLDRISVYY 43.430592 578.80284422636 1574321.125 7745.0 ENST00000518096.1_1_8:30209523-30210210:+|nuORF;;ENSG00000196230|ENST00000327892|TUBB 5.059039274851481 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7755 43.435 248.0 348030.0 25 0 31758.0 + 33854 SLEVGLELL 9 112 486.78329193387634 971.5520309345528 2 486.7831603884697 MULTI CID FTMS 0 0 0 7745 244180.53125 0.5500184776005727 14 -1.408061981201172 10 Unmodified _SLEVGLELL_ REV__ENSG00000178028|ENST00000372289|DMAP1;REV__ENST00000494092.1_1_1:44685134-44686104:+|nuORF 15.847184025352805 0.4077185912009129 1 {I|L} 1 -1 11.783 0.0 0.0 1.2128 0.0 0.0 840.457073514434 0.0 840.457073514434 0.0 7.446667771926857 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2128 + + 98 + 1 2.13 71647.9 1.0 4238 3515 7745 DOHH2_400M_050219_1,7755 DOHH2_400M_050219_1,7755,SLEVGLELL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7756 43.441 310.0 170480.0 25 0 46243.0 + 37728 TLQLLLPI 8 68 455.80100957036 909.58746620752 2 455.8008300662041 MULTI CID FTMS 0 0 0 7745 194776.765625 0.4254494455036746 2 -0.186126708984375 11 Unmodified _TLQLLLPI_ REV__ENSG00000103226|ENST00000399336|NOMO3;REV__ENSG00000103512|ENST00000287667|NOMO1;REV__ENSG00000185164|ENST00000622306|NOMO2;REV__ENST00000566823.1_1_16:14982940-14989499:+|nuORF;REV__ENST00000570346.1_2_16:16387929-16388153:+|nuORF;REV__ENST00000573635.1_1_16:16381587-16388153:+|nuORF;REV__nc|ENSG00000185164|Q5JPE7-3|NOMO2;REV__nc|ENSG00000185164|Q5JPE7|NOMO2 5.230669730166228 0.792582437072536 1 {I|L} 1 -1 10.379 0.0 0.0 1.141 0.0 0.0 778.4923409407215 0.0 778.4923409407215 0.0 4.894053504650309 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.141 + + 17 + 1 2.13 46213.8 1.0 4239 3515 7745 DOHH2_400M_050219_1,7756 DOHH2_400M_050219_1,7756,TLQLLLPI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7757 43.455 800.0 239020.0 25 0 26974.0 + + 42626 ISELLTSDDMKNAY 14 157 800.3867451557751 799.379468689175 1 800.3835327029228 MULTI CID FTMS 0 0 0 7745 188889.515625 1.0 0 0.0 12 Unmodified _VTTQSHGA_ nc|ENSG00000118246|Q9NYY8-2|FASTKD2;ENST00000471788.1_1_2:207651391-207655428:+|nuORF;ENSG00000118246|ENST00000402774|FASTKD2;ENST00000487777.5_1_2:207631381-207653673:+|nuORF 10.183394434864962 0.7604730176254005 1 {[TV]|[{I|L}S]}E{I|L}{I|L}T 6 -1 40.869 0.0 0.0 5.1126 0.0 0.0 0.0 139.9810671601313 139.9810671601313 21.19611091059251 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.579689690656103 0.0 {[TV]|[{I|L}S]}E{I|L}{I|L}T 5.1126 - 896 1 2.13 133224.4 0.7900000214576721 4240 3515 7745 DOHH2_400M_050219_1,7757 DOHH2_400M_050219_1,7757,VTTQSHGA False False ISELLTSDDMKNAY 43.454719 800.383532702923 1489694.0 7745.0 nc|ENSG00000118246|Q9NYY8-2|FASTKD2;;ENST00000471788.1_1_2:207651391-207655428:+|nuORF;;ENSG00000118246|ENST00000402774|FASTKD2;;ENST00000487777.5_1_2:207631381-207653673:+|nuORF 7.986916542053223 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7758 43.469 800.0 212510.0 25 0 22591.0 + 9459 FLDDGHTFNY 10 139 614.767320654023 1227.520088374846 2 614.7671386599541 MULTI CID FTMS 0 0 0 7745 182308.25 0.1024440697478805 2 -0.186126708984375 13 Unmodified _FLDDGHTFNY_ ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB 83.42873516780209 0.014257832770272 1 T{M(Oxidation (M))|F}N{I|L}{M(Oxidation (M))|F}Y 6 8 51.024 0.0 0.0 4.1566 0.0 0.0 424.1361866681656 0.0 424.1361866681656 0.0 14.124628150806371 0.0 0.0 0 0.4247425010840047 0.0 0.6861818737241735 0.6549471895720984 T{M(Oxidation (M))|F}N{I|L}{M(Oxidation (M))|F}Y 4.1566 - 501 1 2.13 126463.5 0.7799999713897705 4241 3515 7745 DOHH2_400M_050219_1,7758 DOHH2_400M_050219_1,7758,FLDDGHTFNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7759 43.472 197.0 365430.0 25 0 53584.0 + 21533 LPITRPFTA 9 107 508.3002017309569 1014.585850528714 2 508.7989379763603 MULTI CID FTMS 0 0 0 7745 131145.46875 0.2181600726864943 5 -0.3973197937011719 14 Unmodified _LPITRPFTA_ REV__ENST00000310645.9_1_21:47546143-47549402:+|nuORF;REV__nc|ENSG00000142173|P12110-2|COL6A2 4.75600775471527 0.7486543447549536 1 W 1 -1 13.099 0.0 0.0 1.2911 0.0 0.0 810.4957606623061 0.0 810.4957606623061 0.0 2.503011752845925 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.2911 - 46 + 1 2.13 62164.3 1.0 4242 3515 7745 DOHH2_400M_050219_1,7759 DOHH2_400M_050219_1,7759,LPITRPFTA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7760 43.481 502.0 289370.0 25 0 21361.0 + 44124 YLDIPNPRY 9 137 575.7995726818527 1149.5845924305054 2 575.7997924685478 MULTI CID FTMS 0 0 0 7745 128275.0625 1.0 0 0.0 15 Unmodified _YLDIPNPRY_ ENSG00000122966|ENST00000392521|CIT;ENST00000537607.5_1_12:120126039-120222037:-|nuORF;ENST00000545913.5_1_12:120126039-120222037:-|nuORF;nc|ENSG00000122966|O14578-3|CIT;nc|ENSG00000122966|O14578|CIT 58.6788170122104 0.0268135626297836 1 Y{I|L}D{I|L}PN[RP]Y 9 0 + 78.4 0.0 0.0 6.8198 6.8198 90.376 0.0 0.0 0.0 50.2132064533734 5.787268505095042 5.787268505095042 9.208187539523747 0 0.9247425010840048 2.0 0.3807196863200844 0.805462187404089 + + Y{I|L}D{I|L}PN[RP]Y;Y{I|L}D{I|L}PGG[RP]Y;Y{I|L}D{I|L}[RD]{[VA]|[{I|L}G]}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L}PN[RP]Y;Y{I|L}D[PS]RR{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L}PGG[RP]Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L}[RD]{[VA]|[{I|L}G]}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E[WR][RP]Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[PS]RR{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EMARR{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.8198;6.0188;4.9446;4.2815;4.2456;3.4805;2.4063;1.8445;1.7073;1.5913 +;-;-;-;-;-;-;-;-;- + 309 + 1 2.13 112056.1 1.0 4243 3515 7745 DOHH2_400M_050219_1,7760 DOHH2_400M_050219_1,7760,YLDIPNPRY True True YLDIPNPRY 43.481188 575.799792468548 3915258.5 7745.0 nc|ENSG00000122966|O14578|CIT;;ENSG00000122966|ENST00000392521|CIT;;ENST00000545913.5_1_12:120126039-120222037:-|nuORF;;nc|ENSG00000122966|O14578-3|CIT;;ENST00000537607.5_1_12:120126039-120222037:-|nuORF 6.828281720479329 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7761 43.49 418.0 442960.0 25 0 37724.0 + 6902 EEFEKLYASY 10 152 639.7977293323231 1277.580905731446 2 639.7982055544853 MULTI CID FTMS 0 0 0 7745 115197.59375 0.1977536913023144 -1 0.12567138671875 16 Unmodified _EEFEKLYASY_ ENSG00000167325|ENST00000300738|RRM1 121.5340881639634 0.0004114631882045 1 EE{M(Oxidation (M))|F}PH[W{I|L}]ASY 10 3 + 79.158 0.0 0.0 6.1959 6.1959 92.654 0.0 0.0 0.0 41.594288737816846 16.532125137753447 16.532125137753447 23.210550590693863 0 1.8065533887547007 1.5228787452803376 1.4436726795685342 0.0 EE{M(Oxidation (M))|F}PH[W{I|L}]ASY;EE{M(Oxidation (M))|F}PNGS{I|L}G{I|L}{[ES]|[DT]|[{I|L}C]};[HM]HPH[W{I|L}]ASY;EE[HM]{I|L}[W{I|L}]ASY;EE{M(Oxidation (M))|F}PNGS{I|L}GV{[ET]|[MV]};EEV{I|L}HW{[ES]|[DT]|[{I|L}C]}SY;EEV{I|L}HHQHSY;EE{M(Oxidation (M))|F}KKNPHSY;EE{M(Oxidation (M))|F}PHYA{[TV]|[{I|L}S]}W;EE{M(Oxidation (M))|F}PHYAG{I|L}{[ES]|[DT]|[{I|L}C]} 6.1959;4.3791;4.3669;4.3469;4.3338;4.0165;3.9929;3.9371;3.9209;3.912 -;-;-;-;-;-;-;-;-;- 14571 + 1 2.13 136842.1 1.0 4244 3515 7745 DOHH2_400M_050219_1,7761 DOHH2_400M_050219_1,7761,EEFEKLYASY True True EEFEKLYASY 43.489825 639.798205554485 6926184.5 7745.0 ENSG00000167325|ENST00000300738|RRM1 8.338928699493408 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7762 43.504 800.0 201820.0 25 0 11444.0 -1 0 152 983.1215773373824 2946.3429026123467 3 983.4553100466728 MULTI CID FTMS 0 0 0 7745 237759.109375 0.7740012582125122 -1 0.12567138671875 17 1 [MN]PN{I|L}{[YD]|[{M(Oxidation (M))|F}M]}N 8 -1 55.227 0.0 0.0 1.8744 0.0 0.0 0.0 1981.9203585260373 1981.9203585260373 17.881135038481226 0.0 0.0 0.0 0 1.079689690656103 2.0 0.0 0.805462187404089 [MN]PN{I|L}{[YD]|[{M(Oxidation (M))|F}M]}N 1.8744 - 13888 + 1 2.13 110335.9 0.8299999833106995 4245 3515 7745 DOHH2_400M_050219_1,7762 DOHH2_400M_050219_1,7762, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7763 43.518 800.0 257210.0 25 0 11050.0 -1 0 148 873.9142427395126 1745.813932545825 2 874.4099609255791 MULTI CID FTMS 0 0 0 7745 151091.125 0.1897764641695025 -3 0.3294258117675781 18 1 [NP]{I|L}NM[RH]AEN{I|L}DPA 14 -1 87.296 0.0 0.0 5.0003 0.0 0.0 0.0 170.04608521600008 170.04608521600008 42.32505879406954 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.7614393726401688 1.7856668758921828 [NP]{I|L}NM[RH]AEN{I|L}DPA 5.0003 - 9616 1 2.13 141949.0 0.6899999976158142 4246 3515 7745 DOHH2_400M_050219_1,7763 DOHH2_400M_050219_1,7763, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7765 43.523 86.0 418160.0 25 0 30828.0 + 26414 NTDPSIVMTY 10 76 570.7657086553279 1139.5168643774557 2 570.7661010622978 MULTI CID FTMS 0 0 0 7764 407549.5 0.1610597034095063 2 -0.1686210632324218 1 Unmodified _NTDPSIVMTY_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF 27.088373467376528 0.3600710273140457 1 TY 2 8 24.024 0.0 0.0 2.1082 0.0 0.0 857.3945969601634 0.0 857.3945969601634 0.0 2.47929045706524 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + TY 2.1082 + + 76 + 1 2.137 34427.5 1.0 4247 3516 7764 DOHH2_400M_050219_1,7765 DOHH2_400M_050219_1,7765,NTDPSIVMTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7766 43.526 135.0 241000.0 25 0 28971.0 27201 PGKAIGFVKD 10 72 516.2957957070188 1030.5770384808377 2 516.2961913943291 MULTI CID FTMS 0 0 0 7764 398952.34375 0.3583505540669282 5 -0.3560676574707031 2 Unmodified _PGKAIGFVKD_ ENSG00000103811|ENST00000220166|CTSH;ENST00000527138.5_1_15:79219940-79224258:-|nuORF;ENST00000533777.5_1_15:79214474-79223953:-|nuORF;ENST00000534237.5_1_15:79214474-79224366:-|nuORF 1.3295316138638542 0.7204866299213272 1 {M(Oxidation (M))|F} 1 9 2.2185 0.0 0.0 0.21527 0.0 0.0 376.2300058654062 504.2461336725219 880.4761395379281 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.21527 + + 2 + 1 2.137 34465.4 1.0 4248 3516 7764 DOHH2_400M_050219_1,7766 DOHH2_400M_050219_1,7766,PGKAIGFVKD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7767 43.528 84.0 749100.0 25 0 194560.0 + + 28182 AAGSHVIIL 9 72 440.766218877715 879.51788482223 2 440.7661926150322 MULTI CID FTMS 0 0 0 7764 740746.0 0.2502789150996627 -2 0.23541259765625 3 Unmodified _PPWALALL_ ENSG00000169188|ENST00000374987|APEX2 24.20995872069341 0.5349487244130675 1 AA[HT]AA{I|L}{I|L}{I|L} 9 -1 + 37.514 0.0 0.0 4.2653 4.2653 78.438 0.0 0.0 0.0 8.440899702813034 22.029478005380064 8.440899702813034 6.532125137753443 0 0.8182503180159344 1.5228787452803376 0.0 0.0 AA[HT]AA{I|L}{I|L}{I|L};AA[HT]{I|L}AA{I|L}{I|L};AA[HT]A{I|L}A{I|L}{I|L};[HV][SG]AA{I|L}{I|L}{I|L};[HV]{[QS]|[NT]}A{I|L}{I|L}{I|L};[HV][SG]{I|L}AA{I|L}{I|L};[HV][SG]A{I|L}A{I|L}{I|L};[HV]{[QS]|[NT]}{I|L}A{I|L}{I|L} 4.2653;3.5226;3.3805;2.3336;1.597;1.5909;1.4488;0.71228 -;-;-;-;-;-;-;- 88 1 2.137 53941.4 1.0 4249 3516 7764 DOHH2_400M_050219_1,7767 DOHH2_400M_050219_1,7767,PPWALALL False False AAGSHVIIL 43.527962 440.766192615032 33616292.0 7764.0 ENSG00000169188|ENST00000374987|APEX2 4.365708669026692 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7768 43.53 76.0 837540.0 25 0 141170.0 + 9235 FGSLEAIGKVL 11 75 567.3295759213604 1132.6445989095207 2 567.3299438357353 MULTI CID FTMS 0 0 0 7764 717901.125 0.5748370461837684 -3 0.323211669921875 4 Unmodified _FGSLEAIGKVL_ REV__ENST00000498365.1_1_2:190327217-190328592:+|nuORF 1.1933415558491238 0.8695176722560516 1 R 1 -1 3.4949 0.0 0.0 0.30856 0.0 0.0 610.480061411277 363.0481966608032 973.5282580720802 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.30856 - 2 + 1 2.137 54897.1 1.0 4250 3516 7764 DOHH2_400M_050219_1,7768 DOHH2_400M_050219_1,7768,FGSLEAIGKVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7769 43.533 165.0 345170.0 25 0 30574.0 + + 6545 AEIGEGAYGKVF 12 80 620.8142133626388 1239.6138737920776 2 620.8145019412041 MULTI CID FTMS 0 0 0 7764 331634.03125 1.0 0 0.0 5 Unmodified _EALIWYDALF_ ENSG00000105810|ENST00000424848|CDK6 34.40172386719151 0.2166836008404837 1 {[CP]|[EA]}{I|L}GEQYGKV{M(Oxidation (M))|F} 11 -1 + 70.64 0.0 0.0 5.6986 5.6986 85.6 0.0 0.0 0.0 28.244723259985392 12.685016939859722 12.685016939859722 9.128498242811006 0 1.674742501084005 0.0 0.3494850021680094 0.0 {[CP]|[EA]}{I|L}GEQYGKV{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}GE[AG]YGKV{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}WQYGKV{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}W[AG]YGKV{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}GEYV{I|L}{[CP]|[EA]}{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}GEY{I|L}V{[CP]|[EA]}{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}[YV]W{I|L}{[CP]|[EA]}{M(Oxidation (M))|F};{[CP]|[EA]}VAEYV{I|L}{[CP]|[EA]}{M(Oxidation (M))|F};{[CP]|[EA]}G{I|L}EYV{I|L}{[CP]|[EA]}{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}WYV{I|L}{[CP]|[EA]}{M(Oxidation (M))|F} 5.6986;4.9622;4.5435;3.8042;3.4442;3.0202;2.9858;2.977;2.977;2.7533 -;-;-;-;-;-;-;-;-;- 1175 + 1 2.137 46172.5 1.0 4251 3516 7764 DOHH2_400M_050219_1,7769 DOHH2_400M_050219_1,7769,EALIWYDALF False False AEIGEGAYGKVF 43.532989 620.814501941204 1717601.5 7764.0 ENSG00000105810|ENST00000424848|CDK6 7.435575803120931 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7770 43.536 142.0 285490.0 25 0 29436.0 + 25483 NELGVGGTSQW 11 75 574.2722810656122 1146.5300091980243 2 574.2725097537041 MULTI CID FTMS 0 0 0 7764 291537.15625 0.767632879298943 -1 0.1097412109375 6 Unmodified _NELGVGGTSQW_ ENSG00000101310|ENST00000650089|SEC23B 28.49450938151212 0.4231428536161201 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GV 5 6 21.972 0.0 0.0 1.9164 0.0 0.0 0.0 631.2398165274508 631.2398165274508 5.462162958407966 0.0 0.0 0.0 0 0.0 0.0 0.5774509799928715 0.0 + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GV 1.9164 + + 80 1 2.137 36367.4 1.0 4252 3516 7764 DOHH2_400M_050219_1,7770 DOHH2_400M_050219_1,7770,NELGVGGTSQW False True NELGVGGTSQW 43.535856 574.272509753704 2274059.75 7764.0 ENSG00000101310|ENST00000650089|SEC23B 6.501646041870117 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7771 43.539 142.0 569960.0 25 0 55114.0 + 25489 NELNIIHKF 9 119 376.5451941640336 1126.6137530923008 3 376.5449401736259 MULTI CID FTMS 0 0 0 7764 288279.15625 0.5814757071867516 -1 0.1097412109375 7 Unmodified _NELNIIHKF_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 16.149105407346934 0.3995459350917656 1 N{I|L}{I|L}HK{M(Oxidation (M))|F} 6 3 34.227 0.0 0.0 3.0381 0.0 0.0 356.16954685825914 0.0 356.16954685825914 0.0 23.25821083970215 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + N{I|L}{I|L}HK{M(Oxidation (M))|F} 3.0381 + + 117 + 1 2.137 67186.1 1.0 4253 3516 7764 DOHH2_400M_050219_1,7771 DOHH2_400M_050219_1,7771,NELNIIHKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7772 43.542 156.0 346140.0 25 0 28605.0 + 29304 QIKEMVEL 8 87 495.2698472073219 988.5251414814438 2 495.2697936892509 MULTI CID FTMS 0 0 0 7764 266557.03125 0.6440446805537026 -1 0.1097412109375 8 Unmodified _QIKEMVEL_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 19.438996006549623 0.6237395211498085 1 {NN|[MP]|[D{I|L}]|[EV]}[RP]MV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 8 5 + 20.635 0.0 0.0 2.0874 2.0874 79.18 0.0 0.0 0.0 2.6760624017703094 -4.858631114164787 -4.858631114164787 14.033350405587436 0 0.0 1.0969100130080565 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[RP]MV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[PG][KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}V[PG][KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}[RP][QT]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[VP][YQ]E{I|L}[Q{I|L}] 2.0874;0.66781;0.26525;0.19061;0.1854 -;-;-;-;- 142 1 2.137 48611.7 1.0 4254 3516 7764 DOHH2_400M_050219_1,7772 DOHH2_400M_050219_1,7772,QIKEMVEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7773 43.545 177.0 476800.0 25 0 65282.0 + 7032 EELDPESREYW 11 92 726.8178534997045 1451.6211540662089 2 726.8178588747978 MULTI CID FTMS 0 0 0 7764 250308.203125 0.4317725413392919 -2 0.23541259765625 9 Unmodified _EELDPESREYW_ ENSG00000183617|ENST00000330133|MRPL54 85.76441949171179 0.0033696626484081 1 EE{I|L}DPES{[RE]|[WV]}YW 11 0 + 83.192 0.0 0.0 5.731 5.731 81.832 0.0 0.0 0.0 4.414074024119984 4.414074024119984 4.414074024119984 4.414074024119984 0 2.138210492164445 1.3010299956639813 0.3807196863200844 0.0 + + EE{I|L}DPES{[RE]|[WV]}YW;EE{I|L}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WHYW;EE{I|L}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[DA]|[EG]}HY[VS];EE{I|L}DPES{[RE]|[WV]}H[DP];{NN|[MP]|[D{I|L}]|[EV]}[HC][{I|L}A]SEPD{I|L}[HC];{[ET]|[MV]}HWWEPD{I|L}[HC];EE{I|L}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W{[WS]|[C(Carbamidomethyl (C)){I|L}]}GR;{NN|[MP]|[D{I|L}]|[EV]}P{[WS]|[C(Carbamidomethyl (C)){I|L}]}YWHYW;EE{I|L}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CT]|[{M(Oxidation (M))|F}G]}TY{[CT]|[{M(Oxidation (M))|F}G]};{[CA]|SS}G[PG]TPES{[RE]|[WV]}YW 5.731;5.4269;4.1667;4.0603;3.6692;3.6048;3.4423;3.2399;3.1461;3.048 +;-;-;-;-;-;-;-;-;- + 805 + 1 2.137 63700.1 1.0 4255 3516 7764 DOHH2_400M_050219_1,7773 DOHH2_400M_050219_1,7773,EELDPESREYW True True EELDPESREYW 43.545221 726.817858874798 7685237.5 7764.0 ENSG00000183617|ENST00000330133|MRPL54 9.894947369893393 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7774 43.548 140.0 506690.0 25 0 45418.0 + 958 AFLNFLTL 8 103 469.77222047756726 937.5298880219344 2 469.7726623415947 MULTI CID FTMS 0 0 0 7764 262803.9375 1.0 0 0.0 10 Unmodified _AFLNFLTL_ REV__ENSG00000121314|ENST00000240615|TAS2R8 23.1484247019978 0.5573009939494978 1 T{I|L} 2 -1 23.315 0.0 0.0 2.4869 0.0 0.0 705.3867586047455 0.0 705.3867586047455 0.0 3.410750142259144 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 T{I|L} 2.4869 + + 336 + 1 2.137 56444.3 1.0 4256 3516 7764 DOHH2_400M_050219_1,7774 DOHH2_400M_050219_1,7774,AFLNFLTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7775 43.552 211.0 364690.0 25 0 33017.0 + 428 AEELPHIHAF 10 117 388.533309559307 1162.578099278121 3 388.5328857302666 MULTI CID FTMS 0 0 0 7764 204655.421875 1.0 0 0.0 11 Unmodified _AEELPHIHAF_ ENSG00000169627|ENST00000651894|BOLA2B;ENSG00000183336|ENST00000330978|BOLA2;ENST00000567436.1_1_16:30204298-30204508:-|nuORF 30.22481116460888 0.2896002054046443 1 {[QN]|[E{I|L}]|[KN]}M{I|L}S{M(Oxidation (M))|F} 6 6 28.421 0.0 0.0 2.4447 0.0 0.0 0.0 439.1833662942181 439.1833662942181 3.794482255454525 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.9247425010840048 0.0 {[QN]|[E{I|L}]|[KN]}M{I|L}S{M(Oxidation (M))|F} 2.4447 - 344 1 2.137 63397.3 1.0 4257 3516 7764 DOHH2_400M_050219_1,7775 DOHH2_400M_050219_1,7775,AEELPHIHAF False True AEELPHIHAF 43.552052 388.532885730267 1477118.125 7764.0 ENSG00000183336|ENST00000330978|BOLA2;;ENST00000567436.1_1_16:30204298-30204508:-|nuORF;;ENSG00000169627|ENST00000651894|BOLA2B 6.440442721048991 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7776 43.555 146.0 317060.0 25 0 18573.0 + 400 AEDTPVVQL 9 89 486.255535211434 970.496517489668 2 486.2555114626884 MULTI CID FTMS 0 0 0 7764 165791.234375 0.9366972068064918 -1 0.1097412109375 12 Unmodified _AEDTPVVQL_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 28.486842064014134 0.1687311288560894 1 {I|L} 1 8 13.979 0.0 0.0 1.4404 0.0 0.0 839.4014685168149 0.0 839.4014685168149 0.0 -0.0050844460847798 -0.0050844460847798 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4404 + + 138 + 1 2.137 42422.0 1.0 4258 3516 7764 DOHH2_400M_050219_1,7776 DOHH2_400M_050219_1,7776,AEDTPVVQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7777 43.559 213.0 331420.0 25 0 14872.0 + 25490 NELNIIHKF 9 119 564.3134781636121 1126.612403394024 2 564.3146850466728 MULTI CID FTMS 0 0 0 7764 137689.1875 0.5863365301545749 -1 0.1097412109375 13 Unmodified _NELNIIHKF_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 63.960520009940105 0.0238892913700936 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}N{I|L}{I|L}HK{M(Oxidation (M))|F} 9 0 + 62.93 0.0 0.0 5.5857 5.5857 86.497 0.0 0.0 0.0 50.16552175100511 9.341605587590536 9.341605587590536 9.208187539523747 0 1.6549471895720984 0.0 0.0 0.3807196863200844 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}N{I|L}{I|L}HK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GG{I|L}{I|L}HK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[RH][PS]K{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[RH][PA]KY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[RH]RR{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[HA][R{I|L}]K{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[RH]{I|L}[PS]K{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[RH]{I|L}[PA]KY;{[QD]|[EN]|[WG]|[KD]|[RS]}[RH]{I|L}RR{M(Oxidation (M))|F} 5.5857;4.7684;1.7866;1.6818;1.4788;1.3631;0.58139;0.47656;0.27358 +;-;-;-;-;-;-;-;- + 513 + 1 2.137 60545.1 1.0 4259 3516 7764 DOHH2_400M_050219_1,7777 DOHH2_400M_050219_1,7777,NELNIIHKF True True NELNIIHKF 43.559012 564.315 3343688.3125 7764.0 ENST00000466404.5_1_19:54621832-54631576:+|nuORF;;nc|ENSG00000105618|Q8WWY3-3|PRPF31;;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;;nc|ENSG00000105618|Q8WWY3-2|PRPF31;;ENSG00000105618|ENST00000321030|PRPF31;;nc|ENSG00000105618|Q8WWY3-4|PRPF31 6.577654838562012 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7778 43.566 364.0 236910.0 25 0 14986.0 + 45437 YTDSSSILNY 10 144 581.7662346121292 1161.5179162910583 2 581.7664062380791 MULTI CID FTMS 0 0 0 7764 111472.5 1.0 0 0.0 14 Unmodified _YTDSSSILNY_ ENSG00000111647|ENST00000279907|BLTP3B 19.256988751693697 0.5244284437930726 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}WW{M(Oxidation (M))|F}NY 8 7 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}WW{M(Oxidation (M))|F} + + 17.307 -8.6003 -0.99265 1.49 1.49 48.538 0.0 0.0 0.0 0.0 3.959863507433399 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}WW{M(Oxidation (M))|F}NY 1.49 - 1302 + 1 2.137 68608.6 1.0 4260 3516 7764 DOHH2_400M_050219_1,7778 DOHH2_400M_050219_1,7778,YTDSSSILNY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7779 43.575 506.0 299660.0 25 0 26893.0 25329 NAKLSSLL 8 144 423.2585139605845 844.502474987969 2 423.2579833865166 MULTI CID FTMS 0 0 0 7764 99454.8828125 1.0 0 0.0 15 Unmodified _NAKLSSLL_ ENSG00000173276|ENST00000310826|ZBTB21;REV__ENSG00000198408|ENST00000361464|OGA;REV__nc|ENSG00000198408|O60502-2|OGA;REV__nc|ENSG00000198408|O60502-4|OGA 21.74664581756881 0.5868176546531598 1 {[HG]|PP}H{I|L}R{I|L}{I|L} 7 5 + 41.687 0.0 0.0 4.9363 4.9363 75.391 0.0 0.0 0.0 26.536757287974662 14.81508216873415 14.81508216873415 1.63303128443836 0 0.7742275032520141 0.0 0.0 0.0 {[HG]|PP}H{I|L}R{I|L}{I|L};{[HG]|PP}H{I|L}{I|L}R{I|L};{[HG]|PP}{I|L}HR{I|L}{I|L};SP{M(Oxidation (M))|F}{I|L}R{I|L}{I|L};{[HG]|PP}{I|L}H{I|L}R{I|L};SP{M(Oxidation (M))|F}{I|L}{I|L}R{I|L};S[KT]QR{I|L}{I|L};S[KT]Q{I|L}R{I|L};S[KT][AG]R{I|L}{I|L};S[KT][AG]{I|L}R{I|L} 4.9363;4.7429;4.5798;4.4135;4.3865;4.2202;3.6584;3.465;2.5535;2.3602 -;-;-;-;-;-;-;-;-;- 209 + 1 2.137 120089.0 1.0 4261 3516 7764 DOHH2_400M_050219_1,7779 DOHH2_400M_050219_1,7779,NAKLSSLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7780 43.582 445.0 365580.0 25 0 15298.0 -1 MYFWKRFCFWK 11 140 857.9015278765635 1713.7885028199269 2 857.9014160037041 MULTI CID FTMS 0 0 0 7764 85998.1953125 0.0556326276116347 -3 0.323211669921875 16 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 1 [MN]PN{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L}S 15 -1 106.84 0.0 0.0 6.2339 0.0 0.0 0.0 121.04107843570546 121.04107843570546 79.06195934470131 0.0 0.0 0.0 0 1.2302046884880935 1.5228787452803376 0.0 1.9291746928241125 [MN]PN{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L}S 6.2339 - 3046 + 1 2.137 109078.0 1.0 4262 3516 7764 DOHH2_400M_050219_1,7780 DOHH2_400M_050219_1,7780,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7781 43.585 81.0 1087900.0 25 0 256450.0 -1 0 66 537.2917235523487 536.2844470857486 1 537.2921630740166 MULTI CID FTMS 0 0 0 7764 612036.125 0.7868166811681899 -1 0.1097412109375 17 1 [YE]{I|L}{I|L} 4 -1 + 49.169 0.0 0.0 9.1684 9.1684 97.167 0.0 0.0 0.0 6.773174902439578 6.773174902439578 6.773174902439578 18.71900532426224 0 0.7742275032520141 1.5228787452803376 0.0 0.0 [YE]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L} 9.1684;5.6779 -;- 24 1 2.137 72772.4 1.0 4263 3516 7764 DOHH2_400M_050219_1,7781 DOHH2_400M_050219_1,7781, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7782 43.591 280.0 190110.0 25 0 16445.0 36766 TEDLSRPLY 9 89 547.2796985624752 1092.5448441917504 2 547.2787353396416 MULTI CID FTMS 0 0 0 7764 131950.859375 0.047666681251962 9 -0.8472404479980469 18 Unmodified _TEDLSRPLY_ ENSG00000257594|ENST00000529983|GALNT4 16.942295170755138 0.3780752226737986 1 {I|L}Y 2 7 16.722 0.0 0.0 1.5305 0.0 0.0 798.3868984903817 0.0 798.3868984903817 0.0 6.888793896675267 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}Y 1.5305 + + 47 + 1 2.137 44627.0 1.0 4264 3516 7764 DOHH2_400M_050219_1,7782 DOHH2_400M_050219_1,7782,TEDLSRPLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7783 43.594 167.0 360540.0 25 0 28839.0 + 36887 TEQDLKEYF 9 92 586.7762913392511 1171.538029745302 2 586.7772094607353 MULTI CID FTMS 0 0 0 7764 107778.7890625 0.0784436419260066 -6 0.6400794982910156 19 Unmodified _TEQDLKEYF_ ENSG00000120948|ENST00000240185|TARDBP 57.72198328787511 0.0273433238377839 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[QT]{I|L}DQ[DP] 10 7 + 42.124 0.0 0.0 3.5956 3.5956 70.763 0.0 0.0 0.0 1.5109775457412482 1.5109775457412482 1.5109775457412482 1.5109775457412482 0 0.805462187404089 0.0 0.6643943297944485 0.7302046884880938 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[QT]{I|L}DQ[DP];{[ET]|[MV]}QD{I|L}[YQ]{I|L}Y;{[DS]|[MA]|[CV]|TT}[PG][QT]{I|L}DQ[DP];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[WR]DQ[DP];[K{I|L}]DEQ{[CP]|[EA]}Q[DP];{[ET]|[MV]}Q{[CP]|[EA]}{[RE]|[WV]}Y{M(Oxidation (M))|F};[K{I|L}]DE{[NV]|[RG]}DQ[DP];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[QT]{I|L}D[AG][DP];{[ET]|[MV]}[AG]D{I|L}[YQ]{I|L}Y;{[ET]|[MV]}[RV]QY{M(Oxidation (M))|F}{[ET]|[MV]} 3.5956;3.4666;3.066;3.038;2.8429;2.8335;2.8163;2.8133;2.6806;2.6103 -;-;-;-;-;-;-;-;-;- 710 1 2.137 53042.1 1.0 4265 3516 7764 DOHH2_400M_050219_1,7783 DOHH2_400M_050219_1,7783,TEQDLKEYF True True TEQDLKEYF 43.593904 586.777209460735 10109481.0 7764.0 ENSG00000120948|ENST00000240185|TARDBP 6.41649071375529 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7785 43.599 38.0 1443500.0 25 0 325070.0 + 36539 TAKEKIRAE 9 72 523.3034874834204 1044.5924220336408 2 523.3040038943291 MULTI CID FTMS 0 0 0 7784 1407352.625 0.4944988923558189 5 -0.3960723876953125 1 Unmodified _TAKEKIRAE_ REV__ENSG00000198887|ENST00000361138|SMC5 1.6526216038709556 0.8569919814334629 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.137 49808.6 1.0 4266 3517 7784 DOHH2_400M_050219_1,7785 DOHH2_400M_050219_1,7785,TAKEKIRAE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7786 43.6 66.0 635350.0 25 0 82146.0 + 1579 ALLERGYSL 9 70 511.28795600292017 1020.5613590726404 2 511.2878600955009 MULTI CID FTMS 0 0 0 7784 570483.0 0.3953426143441747 1 -0.0922355651855468 2 Unmodified _ALLERGYSL_ ENSG00000182199|ENST00000328923|SHMT2;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 38.17557092003332 0.0854718145212029 1 S{I|L} 2 7 27.519 0.0 0.0 2.6964 0.0 0.0 802.43556015632 0.0 802.43556015632 0.0 8.05462187404089 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + S{I|L} 2.6964 + + 46 1 2.137 39103.6 1.0 4267 3517 7784 DOHH2_400M_050219_1,7786 DOHH2_400M_050219_1,7786,ALLERGYSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7787 43.602 64.0 818480.0 25 0 105480.0 43915 YGFPQPRL 8 69 489.2655591744022 976.5165654156044 2 489.2657348513603 MULTI CID FTMS 0 0 0 7784 854189.625 0.721305040076742 1 -0.0922355651855468 3 Unmodified _YGFPQPRL_ ENSG00000144233|ENST00000272647|AMMECR1L 14.581692164780916 0.6954967302934248 1 YGM 3 6 43.416 0.0 0.0 4.446 0.0 0.0 0.0 622.3680944048845 622.3680944048845 27.2762969932814 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 YGM 4.446 - 55 + 1 2.137 44713.6 1.0 4268 3517 7784 DOHH2_400M_050219_1,7787 DOHH2_400M_050219_1,7787,YGFPQPRL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7788 43.604 78.0 678720.0 25 0 50683.0 + 24345 MELPHGGEGW 10 85 556.7457002935879 1111.4768476539757 2 556.7460815310478 MULTI CID FTMS 0 0 0 7784 704381.375 0.619598055480298 1 -0.0922355651855468 4 Unmodified _MELPHGGEGW_ ENSG00000127564|ENST00000262300|PKMYT1;ENST00000575981.1_1_16:3022956-3024767:-|nuORF;nc|ENSG00000127564|Q99640-2|PKMYT1;nc|ENSG00000127564|Q99640-3|PKMYT1;nc|ENSG00000127564|Q99640-4|PKMYT1 62.57269311338072 0.0298375429882549 1 ME{I|L}PH 5 5 63.175 0.0 0.0 5.6839 0.0 0.0 0.0 501.1749361627563 501.1749361627563 21.255608885161763 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.5 0.0 + ME{I|L}PH 5.6839 + + 543 + 1 2.137 42350.7 1.0 4269 3517 7784 DOHH2_400M_050219_1,7788 DOHH2_400M_050219_1,7788,MELPHGGEGW True True MELPHGGEGW 43.603627 556.746081531048 15455994.0 7784.0 nc|ENSG00000127564|Q99640-4|PKMYT1;;nc|ENSG00000127564|Q99640-2|PKMYT1;;ENST00000575981.1_1_16:3022956-3024767:-|nuORF;;ENSG00000127564|ENST00000262300|PKMYT1;;nc|ENSG00000127564|Q99640-3|PKMYT1 8.060466130574545 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7789 43.606 120.0 959570.0 25 0 69445.0 + 25966 NLPPHIIRL 9 108 358.2254054873107 1071.6543870621322 3 358.2253295779228 MULTI CID FTMS 0 0 0 7784 563380.125 0.4839009642930075 4 -0.2796821594238281 5 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 9.5439744041441 0.5815088571869578 1 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}R{I|L}{I|L} 9 2 + 53.351 0.0 0.0 4.9784 4.9784 77.467 0.0 0.0 0.0 40.587177872842766 4.393105370789598 4.393105370789598 3.0102999566398125 0 0.1747425010840047 1.6989700043360187 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}R{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PP{I|L}HR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PHR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PPHR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}R{I|L}{I|L} 4.9784;4.6975;4.4166;4.1357;3.2287 -;-;-;-;- 96 + 1 2.137 99868.6 1.0 4270 3517 7784 DOHH2_400M_050219_1,7789 DOHH2_400M_050219_1,7789,NLPPHIIRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7790 43.609 141.0 345900.0 25 0 65620.0 + 13145 HFKSTIGPI 9 76 500.2827811471595 998.551009361119 2 500.2831603884697 MULTI CID FTMS 0 0 0 7784 289678.0 0.2059888133961918 6 -0.5004959106445312 6 Unmodified _HFKSTIGPI_ REV__ENSG00000180773|ENST00000326402|SLC36A4;REV__ENST00000526735.1_1_11:92887247-92899179:-|nuORF;REV__ENST00000527503.1_1_11:92881705-92887463:-|nuORF;REV__nc|ENSG00000180773|Q6YBV0-2|SLC36A4 3.944395688203298 0.7769873103969335 1 {I|L} 1 -1 10.379 0.0 0.0 1.0394 0.0 0.0 867.4561129761565 0.0 867.4561129761565 0.0 10.37860356969059 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0394 + + 11 + 1 2.137 43292.8 1.0 4271 3517 7784 DOHH2_400M_050219_1,7790 DOHH2_400M_050219_1,7790,HFKSTIGPI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7791 43.616 407.0 349120.0 25 0 35290.0 + 36837 TELGRPDAEYW 11 108 668.8127284195401 1335.61090390588 2 668.8119994997978 MULTI CID FTMS 0 0 0 7784 227431.03125 0.6561624494543093 -1 0.076385498046875 7 Unmodified _TELGRPDAEYW_ ENSG00000196126|ENST00000360004|HLA-DRB1;ENSG00000198502|ENST00000374975|HLA-DRB5 62.86856922530385 0.057503257068159 1 TEHET[VS][KG]YW 11 7 + 68.013 0.0 0.0 5.0922 5.0922 74.658 0.0 0.0 0.0 14.552593986562805 0.7222920559330532 0.7222920559330532 0.7222920559330532 0 0.8494850021680094 1.5228787452803376 0.6109243748081782 0.0 TEHET[VS][KG]YW;TEHEA[DP]{[NV]|[RG]}{I|L}[DP];TEHE{[WT]|[RM]}[KG]YW;TEEHT[VS][KG]YW;TEHTE[VS][KG]YW;TEHE[WP]{[NV]|[RG]}{I|L}[DP];TMYTA[DP]{[NV]|[RG]}{I|L}[DP];TEEH{[WT]|[RM]}[KG]YW;TEHT{[MG]|[TS]}RRYW;TMYT[WP]{[NV]|[RG]}{I|L}[DP] 5.0922;5.0382;4.8253;4.7475;4.6415;4.5431;4.5152;4.4806;4.3244;4.0202 -;-;-;-;-;-;-;-;-;- 768 + 1 2.137 105547.3 1.0 4272 3517 7784 DOHH2_400M_050219_1,7791 DOHH2_400M_050219_1,7791,TELGRPDAEYW True True TELGRPDAEYW 43.616233 668.811999499798 2230673.25 7784.0 ENSG00000196126|ENST00000360004|HLA-DRB1;;ENSG00000198502|ENST00000374975|HLA-DRB5 6.9653580983479815 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7792 43.623 375.0 300050.0 25 0 41790.0 + 39766 VEMYDPTRNEW 11 97 720.3167615730085 1438.618970212817 2 720.3169433474541 MULTI CID FTMS 0 0 0 7784 222279.609375 0.6790662002304432 -1 0.076385498046875 8 Unmodified _VEMYDPTRNEW_ ENSG00000116679|ENST00000367498|IVNS1ABP;ENST00000459929.5_1_1:185267169-185275646:-|nuORF;ENST00000480769.5_1_1:185267169-185274781:-|nuORF 64.69154705217129 0.0501048056983406 1 VEMYDPT 7 4 79.729 0.0 0.0 5.5421 0.0 0.0 0.0 600.2535517904316 600.2535517904316 54.06759162565898 0.0 0.0 0.0 0 1.3494850021680094 1.6989700043360187 0.805462187404089 0.0 + VEMYDPT 5.5421 + + 376 + 1 2.137 82931.9 1.0 4273 3517 7784 DOHH2_400M_050219_1,7792 DOHH2_400M_050219_1,7792,VEMYDPTRNEW True True VEMYDPTRNEW 43.622977 720.316943347454 2606414.5 7784.0 ENST00000480769.5_1_1:185267169-185274781:-|nuORF;;ENSG00000116679|ENST00000367498|IVNS1ABP;;ENST00000459929.5_1_1:185267169-185275646:-|nuORF 9.550071080525717 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7793 43.627 233.0 256760.0 25 0 30213.0 + -1 APPLHPRW 8 105 508.27907687596826 0 508.2796813845634 PEAK CID FTMS 0 0 0 7784 117362.0703125 0.2355622120850455 8 -0.7708549499511719 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))APPLHPRW_ REV__ENST00000314117.8_1_4:37650968-37687967:-|nuORF 6.354104778181461 0.5763711549229614 1 {M(Oxidation (M))|F}H 2 -1 4.6927 0.0 0.0 0.46255 0.0 0.0 360.1938826564303 367.19773279361567 727.391615450046 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}H 0.46255 - 3 + 1 2.137 49625.2 1.0 4274 3517 7784 DOHH2_400M_050219_1,7793 DOHH2_400M_050219_1,7793,APPLHPRW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7794 43.632 229.0 285310.0 25 0 11585.0 429 AEELPHIHAF 10 116 582.2935128789348 1162.5724728246696 2 582.2939330935478 MULTI CID FTMS 0 0 0 7784 121428.7265625 0.9388465559950928 -1 0.076385498046875 10 Unmodified _AEELPHIHAF_ ENSG00000169627|ENST00000651894|BOLA2B;ENSG00000183336|ENST00000330978|BOLA2;ENST00000567436.1_1_16:30204298-30204508:-|nuORF 15.847184025352805 0.5816416552707754 1 HYVY 4 9 24.157 0.0 0.0 2.0779 0.0 0.0 582.3199940412125 0.0 582.3199940412125 0.0 4.960762528683702 0.0 0.0 0 0.0 0.0 0.0 0.0 HYVY 2.0779 - 354 1 2.137 55608.3 1.0 4275 3517 7784 DOHH2_400M_050219_1,7794 DOHH2_400M_050219_1,7794,AEELPHIHAF False True TEVSRFYVY 43.631658 582.293933093548 575270.4375 7784.0 ENST00000473145.5_1_3:52445201-52445348:+|nuORF 3.8704702059427896 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7795 43.645 800.0 151600.0 25 0 11414.0 + 7145 EENGTAAITF 10 164 526.7476350735386 1051.4807172138771 2 526.7483398318291 MULTI CID FTMS 0 0 0 7784 102808.375 0.7996744295117956 -1 0.076385498046875 11 Unmodified _EENGTAAITF_ ENSG00000119953|ENST00000369603|SMNDC1 34.40172386719151 0.2166836008404837 1 AADMT{M(Oxidation (M))|F} 6 7 49.232 0.0 0.0 4.6821 0.0 0.0 397.2208428015709 0.0 397.2208428015709 0.0 33.95721707930983 0.0 0.0 0 0.0 0.0 1.586696871556164 0.0 AADMT{M(Oxidation (M))|F} 4.6821 - 808 + 1 2.137 96045.3 0.5199999809265137 4276 3517 7784 DOHH2_400M_050219_1,7795 DOHH2_400M_050219_1,7795,EENGTAAITF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7796 43.659 800.0 173240.0 25 0 15297.0 -1 0 99 791.3534249642053 2371.038445492816 3 791.6888915896416 MULTI CID FTMS 0 0 0 7784 97684.3828125 1.0 0 0.0 12 1 EWVDY[RH]VNYEE{M(Oxidation (M))|F} 13 -1 82.768 0.0 0.0 3.4908 0.0 0.0 586.2905750959 0.0 586.2905750959 0.0 64.66113918699466 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.805462187404089 EWVDY[RH]VNYEE{M(Oxidation (M))|F} 3.4908 - 1639 1 2.137 105217.8 0.5899999737739563 4277 3517 7784 DOHH2_400M_050219_1,7796 DOHH2_400M_050219_1,7796, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7797 43.668 497.0 142230.0 25 0 5293.8 + 17129 KLHEYFPEM 9 129 597.2857939453974 1192.5570349575946 2 597.2855102419853 MULTI CID FTMS 0 0 0 7784 96861.78125 1.0 0 0.0 13 Unmodified _KLHEYFPEM_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 19.256988751693697 0.3154191944385105 1 {M(Oxidation (M))|F}PEM 4 5 26.564 0.0 0.0 2.2275 0.0 0.0 670.3690599593509 0.0 670.3690599593509 0.0 0.622352066686517 0.0 0.0 0 0.5 0.0 0.6694451763165201 0.0 + {M(Oxidation (M))|F}PEM 2.2275 + + 166 + 1 2.137 57987.6 1.0 4278 3517 7784 DOHH2_400M_050219_1,7797 DOHH2_400M_050219_1,7797,KLHEYFPEM False True KLHEYFPEM 43.66812 597.285510241985 536246.4375 7784.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 4.028106689453125 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7798 43.671 134.0 305330.0 25 0 29195.0 + 38410 TRGAPIVL 8 67 413.7610635089183 825.5075740846366 2 413.7609435915947 MULTI CID FTMS 0 0 0 7784 237763.515625 0.8330653507434971 1 -0.0922355651855468 14 Unmodified _TRGAPIVL_ REV__ENSG00000068781|ENST00000394754|STON1-GTF2A1L;REV__ENSG00000242441|ENST00000403751|GTF2A1L;REV__nc|ENSG00000242441|Q9UNN4-2|GTF2A1L;REV__nc|ENSG00000243244|Q9Y6Q2-2|STON1 7.910154910731844 0.7763180056447161 1 V{I|L} 2 -1 19.949 0.0 0.0 2.4165 0.0 0.0 595.3446845356117 0.0 595.3446845356117 0.0 9.490925311194188 0.0 0.0 0 0.5 0.0 0.0 0.0 V{I|L} 2.4165 + + 16 + 1 2.137 36209.3 1.0 4279 3517 7784 DOHH2_400M_050219_1,7798 DOHH2_400M_050219_1,7798,TRGAPIVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7799 43.686 800.0 145790.0 25 0 32366.0 + -1 AEITDKLGL 9 115 959.1135481789956 2874.318815137187 3 959.1189453005792 MULTI CID FTMS 0 0 0 7784 111830.1640625 0.0787598764426759 -6 0.5894889831542969 15 ENST00000444561.2_1_17:43710417-43713807:+|nuORF;ENSG00000143761|ENST00000272102|ARF1;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3;ENSG00000134287|ENST00000256682|ARF3 1 {I|L}G{I|L}KD 5 -1 30.477 0.0 0.0 1.0603 0.0 0.0 1933.790996388943 411.1885470026001 2344.979543391544 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0044321917401078 0.0 {I|L}G{I|L}KD 1.0603 - 734 + 1 2.137 80896.2 0.6100000143051147 4280 3517 7784 DOHH2_400M_050219_1,7799 DOHH2_400M_050219_1,7799, False False AEITDKLGL 43.686141 959.118945300579 4024374.625 7784.0 ENST00000444561.2_1_17:43710417-43713807:+|nuORF;;ENSG00000143761|ENST00000272102|ARF1;;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;;nc|ENSG00000134287|P61204-2|ARF3;;ENSG00000134287|ENST00000256682|ARF3 5.880335172017415 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7801 43.693 146.0 412580.0 25 0 59782.0 40857 VLPLGAEL 8 88 406.248590729849 810.482628526498 2 406.2483398318291 MULTI CID FTMS 0 0 0 7800 351384.4375 0.0610914145549004 5 -0.4082603454589844 1 Unmodified _VLPLGAEL_ ENST00000485984.1_1_1:3389348-3394597:+|nuORF 2.302733041254933 0.8103549651115762 1 Q{[QN]|[E{I|L}]|[KN]} 3 6 10.48 0.0 0.0 1.293 0.0 0.0 422.2800356083324 0.0 422.2800356083324 0.0 8.005259607975043 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 Q{[QN]|[E{I|L}]|[KN]} 1.293 - 13 + 1 2.144 51784.5 1.0 4281 3518 7800 DOHH2_400M_050219_1,7801 DOHH2_400M_050219_1,7801,VLPLGAEL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7802 43.696 146.0 378050.0 25 0 75027.0 + 23736 LTVTRNFVL 9 71 531.8168122278975 1061.6190715225948 2 531.8170654177666 MULTI CID FTMS 0 0 0 7800 395797.03125 0.3979319610920062 6 -0.542816162109375 2 Unmodified _LTVTRNFVL_ REV__ENSG00000172053|ENST00000306125|QARS1;REV__ENST00000459870.6_1_3:49133464-49135556:-|nuORF;REV__ENST00000466179.2_1_3:49133464-49136021:-|nuORF;REV__ENST00000482248.7_1_3:49133464-49135771:-|nuORF;REV__ENST00000494984.5_1_3:49133464-49135940:-|nuORF;REV__ENST00000497635.5_1_3:49133464-49135940:-|nuORF;REV__nc|ENSG00000172053|P47897-2|QARS1 4.3292370932331545 0.7635526921153418 1 K 1 -1 3.0989 0.0 0.0 0.29191 0.0 0.0 691.3988089266949 239.09319482974848 930.4920037564432 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.29191 - 8 + 1 2.144 48636.0 1.0 4282 3518 7800 DOHH2_400M_050219_1,7802 DOHH2_400M_050219_1,7802,LTVTRNFVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7803 43.698 87.0 840640.0 25 0 81723.0 + 588 AEITDKLGL 9 88 480.274455977208 958.534359021216 2 480.2743713259697 MULTI CID FTMS 0 0 0 7800 614261.75 0.7987140202592196 -1 0.0922355651855468 3 Unmodified _AEITDKLGL_ ENSG00000134287|ENST00000256682|ARF3;ENSG00000143761|ENST00000272102|ARF1;ENST00000444561.2_1_17:43710417-43713807:+|nuORF;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3 34.40172386719151 0.1061884637610825 1 [TA]AT{I|L}{I|L}G 7 5 39.689 0.0 0.0 4.1406 0.0 0.0 0.0 328.1513993867034 328.1513993867034 7.790980903500667 0.0 0.0 0.0 0 0.0 0.0 1.7249073637206092 0.0 [TA]AT{I|L}{I|L}G 4.1406 - 391 1 2.144 58915.5 1.0 4283 3518 7800 DOHH2_400M_050219_1,7803 DOHH2_400M_050219_1,7803,AEITDKLGL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7804 43.7 114.0 814050.0 25 0 140310.0 + 8004 EMKSRILVI 9 98 363.55454837104463 1087.641815713334 3 363.5545837283134 MULTI CID FTMS 0 0 0 7800 500567.8125 0.9382071402088774 -1 0.0922355651855468 4 Unmodified _EMKSRILVI_ ENSG00000111358|ENST00000543341|GTF2H3;nc|ENSG00000111358|Q13889-2|GTF2H3 29.84058131909904 0.1515068451768857 1 V{I|L} 2 7 16.559 0.0 0.0 1.5225 0.0 0.0 857.4777512375512 0.0 857.4777512375512 0.0 3.651733220608783 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + V{I|L} 1.5225 + + 155 + 1 2.144 80750.5 1.0 4284 3518 7800 DOHH2_400M_050219_1,7804 DOHH2_400M_050219_1,7804,EMKSRILVI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7805 43.703 120.0 802010.0 25 0 65887.0 + 29435 QLFVRAQEL 9 106 552.3140774104465 1102.613601887693 2 552.3145629763603 MULTI CID FTMS 0 0 0 7800 436335.1875 0.1476660209830944 -2 0.1686210632324218 5 Unmodified _QLFVRAQEL_ ENSG00000149806|ENST00000529639|FAU;ENST00000531357.1_1_11:64889042-64889375:-|nuORF 103.35351024395868 0.0092202910191236 1 [Q{I|L}]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 9 2 + 61.422 0.0 0.0 5.5706 5.5706 78.875 0.0 0.0 0.0 2.525749891599532 2.525749891599532 2.525749891599532 2.525749891599532 0 0.8807196863200843 1.6989700043360187 0.5 2.004432191740108 [Q{I|L}]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};Q{I|L}{M(Oxidation (M))|F}V[H{I|L}]S{M(Oxidation (M))|F}{I|L};[Q{I|L}]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}D[Q{I|L}]{I|L};[Q{I|L}]{M(Oxidation (M))|F}VN{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[Q{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}Q{M(Oxidation (M))|F}{I|L};[AG]{I|L}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[Q{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}[AG]{M(Oxidation (M))|F}{I|L};[AG]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}Q{M(Oxidation (M))|F}{I|L};[AG]AREV{I|L}Q{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}T{[CA]|SS}{I|L} 5.5706;5.3415;5.0928;5.0362;4.748;4.2342;3.9129;3.865;3.8339;3.7996 -;-;-;-;-;-;-;-;-;- 591 1 2.144 77652.1 1.0 4285 3518 7800 DOHH2_400M_050219_1,7805 DOHH2_400M_050219_1,7805,QLFVRAQEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7806 43.706 178.0 732390.0 25 0 69752.0 + 14270 IEHGIITNW 9 124 541.78520523617 1081.55585753914 2 541.7855102419853 MULTI CID FTMS 0 0 0 7800 380811.96875 0.0553814189908231 -3 0.2783622741699219 6 Unmodified _IEHGIITNW_ ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF 39.957323273325 0.0756908302845263 1 {I|L}G{I|L}VTNW 7 3 56.028 0.0 0.0 5.1803 0.0 0.0 280.11726576972814 0.0 280.11726576972814 0.0 29.02067989526113 0.0 0.0 0 0.7302046884880937 0.0 0.8494850021680094 0.0 {I|L}G{I|L}VTNW 5.1803 - 1706 1 2.144 101975.2 1.0 4286 3518 7800 DOHH2_400M_050219_1,7806 DOHH2_400M_050219_1,7806,IEHGIITNW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7807 43.709 152.0 379110.0 25 0 58312.0 24074 LYDVKEKKK 9 81 575.8429105315546 1149.671268129909 2 575.8431884646416 MULTI CID FTMS 0 0 0 7800 348798.125 0.841546642809045 -1 0.0922355651855468 7 Unmodified _LYDVKEKKK_ ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;nc|ENSG00000116641|Q96N67-7|DOCK7 4.75600775471527 0.7486543447549536 1 [Y{I|L}]DM 4 6 25.406 0.0 0.0 2.2099 0.0 0.0 0.0 624.4373563469591 624.4373563469591 13.416375079047498 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [Y{I|L}]DM 2.2099 - 23 1 2.144 49317.9 1.0 4287 3518 7800 DOHH2_400M_050219_1,7807 DOHH2_400M_050219_1,7807,LYDVKEKKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7808 43.714 249.0 348020.0 25 0 33343.0 + 9063 FEYEYSQRW 9 84 654.2877875798403 1306.5610222264804 2 654.2883178591728 MULTI CID FTMS 0 0 0 7800 134454.34375 0.3852583795512347 -2 0.1686210632324218 8 Unmodified _FEYEYSQRW_ ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ 45.739877483867886 0.0497104363764649 1 {M(Oxidation (M))|F}EYEYSQ[WR] 9 0 + 76.674 0.0 0.0 5.8684 5.8684 87.601 0.0 0.0 0.0 66.58539067949008 7.147642715192504 7.147642715192504 9.208187539523747 0 1.1549471895720984 0.0 0.75 0.0 + + {M(Oxidation (M))|F}EYEYSQ[WR];{M(Oxidation (M))|F}EYEYS[AG][WR];[YE]{M(Oxidation (M))|F}E{I|L}Y[VS]EE;[YE]{M(Oxidation (M))|F}{I|L}EY[VS]EE;[YE]{M(Oxidation (M))|F}E{I|L}[VS]YEE;{M(Oxidation (M))|F}EYEYS{[RE]|[WV]}{[QG]|[NA]};[YE]{M(Oxidation (M))|F}{I|L}E[VS]YEE;{M(Oxidation (M))|F}EYEW[R{M(Oxidation (M))|F}][KC];{M(Oxidation (M))|F}EYEGE[R{M(Oxidation (M))|F}][KC];[YE]{M(Oxidation (M))|F}[KS]{[NV]|[RG]}YEE 5.8684;5.1636;4.6864;4.5341;4.4916;4.3983;4.3393;3.7029;3.6073;3.4486 +;-;-;-;-;-;-;-;-;- + 533 + 1 2.144 70952.5 1.0 4288 3518 7800 DOHH2_400M_050219_1,7808 DOHH2_400M_050219_1,7808,FEYEYSQRW True True FEYEYSQRW 43.713809 654.288317859173 1748667.25 7800.0 ENSG00000116560|ENST00000357214|SFPQ;;nc|ENSG00000116560|P23246-2|SFPQ 5.968935251235962 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7809 43.722 485.0 201860.0 25 0 8686.1 + 25414 NEAVKIIHDF 10 143 593.3172959631993 1184.6200389931985 2 593.3171264529228 MULTI CID FTMS 0 0 0 7800 130394.265625 1.0 0 0.0 9 Unmodified _NEAVKIIHDF_ ENSG00000106399|ENST00000223129|RPA3 85.72906273940103 0.0123726238944714 1 NEAVK{I|L}{I|L}HD{M(Oxidation (M))|F} 10 0 + 105.09 0.0 0.0 8.8708 8.8708 98.699 0.0 0.0 0.0 66.90015820604495 15.367580772427957 15.367580772427957 47.641243855292586 0 2.5356668758921828 1.6989700043360187 0.2396518287104437 0.4247425010840047 + + NEAVK{I|L}{I|L}HD{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}AVK{I|L}{I|L}HD{M(Oxidation (M))|F};[AG]DAVK{I|L}{I|L}HD{M(Oxidation (M))|F};{[QS]|[NT]}{[DS]|[MA]|[CV]|TT}{I|L}{I|L}K[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F};{M(Oxidation (M))|F}[PS][{I|L}P]{I|L}{I|L}HD{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[C(Carbamidomethyl (C))S]{I|L}{I|L}K[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F};{[CP]|[EA]}NVK{I|L}{I|L}HD{M(Oxidation (M))|F};NE[HV]VKVVD{M(Oxidation (M))|F};[AG]S{[DS]|[MA]|[CV]|TT}{I|L}{I|L}K[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F};[H{I|L}]{I|L}KVADEN{M(Oxidation (M))|F} 8.8708;4.8491;3.7223;3.689;3.2744;3.1785;2.9654;2.9402;2.6353;2.0716 +;+;-;-;-;-;-;-;-;- + 510 + 1 2.144 76055.3 1.0 4289 3518 7800 DOHH2_400M_050219_1,7809 DOHH2_400M_050219_1,7809,NEAVKIIHDF True True NEAVKIIHDF 43.722387 593.317126452923 749060.875 7800.0 ENSG00000106399|ENST00000223129|RPA3 8.011268456776937 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7810 43.724 82.0 1015000.0 25 0 95891.0 30094 QVETLQRVI 9 113 543.3195281714145 1084.624503409629 2 544.8286010622978 MULTI CID FTMS 0 0 0 7800 414242.59375 0.9007996370642186 -1 0.0922355651855468 10 Unmodified _QVETLQRVI_ ID3|p.I69T|1|0.57|ENSG00000117318|chr1:23559221-23559221|A/G|missense_variant 10.823927491677226 0.5436922275383211 1 {I|L}{I|L}VQ 4 7 24.412 0.0 0.0 2.2508 0.0 0.0 613.30082900215 0.0 613.30082900215 0.0 6.787887749990343 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}VQ 2.2508 - 67 1 2.144 65430.1 1.0 4290 3518 7800 DOHH2_400M_050219_1,7810 DOHH2_400M_050219_1,7810,QVETLQRVI False False False False variant PXD020620_cell_line DOHH2_400M_050219_1 7811 43.738 800.0 105550.0 25 0 14279.0 -1 0 105 901.446881946423 1800.879210959646 2 901.9460937380792 MULTI CID FTMS 0 0 0 7800 117183.1953125 0.6208047680219829 3 -0.1874465942382812 11 1 {[QV]|[N{I|L}]|[RA]|[KV]}PN{[QV]|[N{I|L}]|[RA]|[KV]}AMEW 10 -1 49.64 0.0 0.0 2.7564 0.0 0.0 0.0 615.2800997369749 615.2800997369749 13.854837468149128 0.0 0.0 0.0 0 0.8935078169319297 2.0 0.3252574989159953 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}PN{[QV]|[N{I|L}]|[RA]|[KV]}AMEW 2.7564 - 1259 + 1 2.144 60872.9 0.6100000143051147 4291 3518 7800 DOHH2_400M_050219_1,7811 DOHH2_400M_050219_1,7811, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7812 43.75 676.0 142350.0 25 0 16330.0 -1 LLCLFLQL 8 128 502.7966328102753 1003.5787126873506 2 502.7976867556572 MULTI CID FTMS 0 0 0 7800 94340.109375 0.52272187750798 2 -0.11895751953125 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LLCLFLQL_ ENST00000462458.5_1_1:156374348-156385256:-|nuORF 6.354104778181461 0.7857632046190106 1 W 1 -1 14.604 0.0 0.0 1.4552 0.0 0.0 799.488424456685 0.0 799.488424456685 0.0 2.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.4552 - 87 + 1 2.144 75959.9 1.0 4292 3518 7800 DOHH2_400M_050219_1,7812 DOHH2_400M_050219_1,7812,LLCLFLQL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7814 43.766 800.0 95623.0 25 0 6164.2 + 6903 EEFEKLYASY 10 124 639.7977293323231 1277.580905731446 2 639.7981445193291 MULTI CID FTMS 0 0 0 7813 71804.3984375 0.1232628597570664 3 -0.2401123046875 1 Unmodified _EEFEKLYASY_ ENSG00000167325|ENST00000300738|RRM1 49.55428908609986 0.0827668555218455 1 EE{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}SG{I|L}{[ES]|[DT]|[{I|L}C]} 11 7 + 51.074 0.0 0.0 3.9977 3.9977 72.348 0.0 0.0 0.0 21.465238643627025 0.3509104494604642 0.3509104494604642 1.7609125905568137 0 0.3807196863200844 1.5228787452803376 0.8807196863200843 0.0 EE{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}SG{I|L}{[ES]|[DT]|[{I|L}C]};EE{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}G{I|L}A[MT];EE{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}G{I|L}S{[ES]|[DT]|[{I|L}C]};EEVYHC{I|L}G{I|L}{[ES]|[DT]|[{I|L}C]};EE{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}G[RP]Y;EE{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}S{[TV]|[{I|L}S]}W;EE{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}GS{I|L}{[ES]|[DT]|[{I|L}C]};EEVYHC{I|L}{[TV]|[{I|L}S]}W;EE{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}[Q{I|L}][MT];EEVYH[VS]{I|L}S{[ES]|[DT]|[{I|L}C]} 3.9977;3.8599;3.8599;3.8489;3.812;3.7621;3.6863;3.6133;3.0337;2.7871 -;-;-;-;-;-;-;-;-;- 1151 + 1 2.144 62102.5 0.8299999833106995 4293 3519 7813 DOHH2_400M_050219_1,7814 DOHH2_400M_050219_1,7814,EEFEKLYASY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7815 43.767 38.0 2040700.0 25 0 252650.0 + 5362 DLKAQLREL 9 81 543.3195281714145 1084.624503409629 2 543.3195678591728 MULTI CID FTMS 0 0 0 7813 1057868.75 0.5039990833510902 -1 0.0637245178222656 2 Unmodified _DLKAQLREL_ ENSG00000171863|ENST00000645674|RPS7;ENST00000479123.1_1_2:3623223-3624265:+|nuORF 39.21299971606389 0.0797768173001226 1 D{I|L}KAQ{I|L} 6 3 76.96 0.0 0.0 7.0956 0.0 0.0 0.0 413.2158297174438 413.2158297174438 59.441811241770125 0.0 0.0 0.0 0 1.5189301784845295 2.0 0.0 0.0 + D{I|L}KAQ{I|L} 7.0956 + + 129 + 1 2.144 64827.9 1.0 4294 3519 7813 DOHH2_400M_050219_1,7815 DOHH2_400M_050219_1,7815,DLKAQLREL True True DLKAQLREL 43.767424 543.319567859173 9859133.0 7813.0 ENSG00000171863|ENST00000645674|RPS7;;ENST00000479123.1_1_2:3623223-3624265:+|nuORF 1.4255146980285645 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7816 43.771 164.0 295050.0 25 0 20043.0 + 31896 RTRTSLRW 8 95 538.3089033351041 1074.603253737008 2 538.3108398318291 MULTI CID FTMS 0 0 0 7813 319274.90625 0.2860956434751255 -3 0.2323455810546875 3 Unmodified _RTRTSLRW_ REV__ENST00000609975.1_1_2:96191991-96192402:-|nuORF 4.3292370932331545 0.7980541185046766 1 {[TV]|[{I|L}S]}{I|L}Q 4 -1 19.922 0.0 0.0 1.8538 0.0 0.0 0.0 630.3358248346311 630.3358248346311 7.703037561203843 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}Q 1.8538 - 83 + 1 2.144 42944.7 1.0 4295 3519 7813 DOHH2_400M_050219_1,7816 DOHH2_400M_050219_1,7816,RTRTSLRW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7817 43.784 800.0 325010.0 25 0 35006.0 + 1414 ALDGGFQMHY 10 194 569.7527893966661 1137.491025860132 2 569.7531616091728 MULTI CID FTMS 0 0 0 7813 130414.6796875 0.3093249132919657 -2 0.1559600830078125 4 Unmodified _ALDGGFQMHY_ ENSG00000255302|ENST00000530028|EID1;nc|ENSG00000255302|Q9Y6B2-2|EID1 68.08070601005525 0.0189984391031388 1 [{I|L}A]DGG{M(Oxidation (M))|F}QMHY 10 0 + 83.952 0.0 0.0 7.3804 7.3804 84.278 0.0 0.0 0.0 27.269987279362624 2.730012720637376 2.730012720637376 2.730012720637376 0 0.7059771852360797 2.0 0.4247425010840047 0.6549471895720985 + + [{I|L}A]DGG{M(Oxidation (M))|F}QMHY;[{I|L}A]DGG{M(Oxidation (M))|F}QMNW;[{I|L}A]DN{M(Oxidation (M))|F}QMHY;[{I|L}A]DN{M(Oxidation (M))|F}QMNW;[{I|L}A]DGG{M(Oxidation (M))|F}QMYH;[{I|L}A]DN{M(Oxidation (M))|F}QMYH;[{I|L}A]DGG{M(Oxidation (M))|F}[AG]MNW;[{I|L}A]DGG{M(Oxidation (M))|F}QMGGW;[{I|L}A]DN{M(Oxidation (M))|F}[AG]MNW;[{I|L}A]DN{M(Oxidation (M))|F}QMGGW 7.3804;7.1404;7.0708;6.8308;6.6658;6.3561;6.3347;6.3347;6.0213;6.0213 +;-;-;-;-;-;-;-;-;- + 4298 + 1 2.144 193417.8 0.6100000143051147 4296 3519 7813 DOHH2_400M_050219_1,7817 DOHH2_400M_050219_1,7817,ALDGGFQMHY True True ALDGGFQMHY 43.78449 569.753161609173 2175714.5 7813.0 ENSG00000255302|ENST00000530028|EID1;;nc|ENSG00000255302|Q9Y6B2-2|EID1 8.678682963053385 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7818 43.791 377.0 265840.0 25 0 40255.0 + 15739 IRPENVIIY 9 90 558.8247688163967 1115.6349846995934 2 558.8242065310478 MULTI CID FTMS 0 0 0 7813 119565.390625 0.6728961993891319 -1 0.0637245178222656 5 Unmodified _IRPENVIIY_ ENSG00000107362|ENST00000333421|ABHD17B;nc|ENSG00000107362|Q5VST6-2|ABHD17B 21.53697664764585 0.2571576504437394 1 [YV]P[H{I|L}]V{I|L}{I|L}Y 9 4 + 48.874 0.0 0.0 4.3808 4.3808 87.267 0.0 0.0 0.0 5.642492736872597 36.10974014136534 5.642492736872597 48.873949984654246 0 1.0 0.0 0.0 0.0 [YV]P[H{I|L}]V{I|L}{I|L}Y 4.3808 - 120 1 2.144 80170.7 1.0 4297 3519 7813 DOHH2_400M_050219_1,7818 DOHH2_400M_050219_1,7818,IRPENVIIY False True IRPENVIIY 43.791263 558.8266 1110724.875 7813.0 nc|ENSG00000107362|Q5VST6-2|ABHD17B;;ENSG00000107362|ENST00000333421|ABHD17B 4.811680634816487 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7819 43.805 800.0 126910.0 25 0 15416.0 + + -1 SSEDSEKVIAGLY 13 142 699.3435139990739 1396.6724750649478 2 699.3422119021416 MULTI CID FTMS 0 0 0 7813 110508.1171875 1.0 0 0.0 6 Carbamidomethyl (C) _LC(Carbamidomethyl (C))DPVNYLQLY_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 28.49450938151212 0.4231428536161201 1 S{[ES]|[DT]|[{I|L}C]}KV{I|L}AG{I|L}Y 10 -1 64.034 0.0 0.0 4.5847 0.0 0.0 331.10273940254064 0.0 331.10273940254064 0.0 44.19084078155621 0.0 0.0 0 1.6237125054200234 0.0 1.2302046884880935 0.0 S{[ES]|[DT]|[{I|L}C]}KV{I|L}AG{I|L}Y 4.5847 - 995 1 2.144 79533.5 0.6200000047683716 4298 3519 7813 DOHH2_400M_050219_1,7819 DOHH2_400M_050219_1,7819,LCDPVNYLQLY False False SSEDSEKVIAGLY 43.805098 699.342211902142 563791.5 7813.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 7.643614768981934 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7821 43.81 37.0 1132800.0 25 0 282620.0 + 88 AAGSHVIIL 9 57 440.766218877715 879.51788482223 2 440.7663452029228 MULTI CID FTMS 0 0 0 7820 1355713.875 0.4580606548271064 2 -0.1848793029785156 1 Unmodified _AAGSHVIIL_ ENSG00000169188|ENST00000374987|APEX2 30.22481116460888 0.1466181017706357 1 AA[HT]AA{I|L}{I|L}{I|L} 9 4 + 38.311 0.0 0.0 4.3559 4.3559 77.273 0.0 0.0 0.0 12.248096566013878 22.82637491194109 12.248096566013878 4.771212547196626 0 0.8182503180159344 1.5228787452803376 0.3807196863200844 0.0 AA[HT]AA{I|L}{I|L}{I|L};AA[HT]{I|L}AA{I|L}{I|L};AA[HT]A{I|L}A{I|L}{I|L};[HV][SG]AA{I|L}{I|L}{I|L};[HV]{[QS]|[NT]}A{I|L}{I|L}{I|L};[HV][SG]{I|L}AA{I|L}{I|L};[HV][SG]A{I|L}A{I|L}{I|L};[HV]{[QS]|[NT]}{I|L}A{I|L}{I|L} 4.3559;3.8134;3.6714;2.6244;2.2301;2.0819;1.9399;1.5456 -;-;-;-;-;-;-;- 68 1 2.144 38865.8 1.0 4299 3520 7820 DOHH2_400M_050219_1,7821 DOHH2_400M_050219_1,7821,AAGSHVIIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7822 43.811 46.0 1057200.0 25 0 248610.0 -1 MKKYIHVAK 9 65 567.3295759213604 1132.6445989095207 2 567.3301879763603 MULTI CID FTMS 0 0 0 7820 1168092.0 0.9353134179179484 1 -0.0684890747070312 2 Oxidation (M) _M(Oxidation (M))KKYIHVAK_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 0.5247636613948944 0.8963649302248013 1 K 1 -1 3.9794 0.0 0.0 0.35134 0.0 0.0 762.4264725440895 239.0924471490844 1001.518919693174 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.35134 + + 2 + 1 2.144 44162.2 1.0 4300 3520 7820 DOHH2_400M_050219_1,7822 DOHH2_400M_050219_1,7822,MKKYIHVAK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7823 43.812 43.0 1451100.0 25 0 213430.0 + 5363 DLKAQLREL 9 83 362.5487648193634 1084.6244650582903 3 362.5485412478447 MULTI CID FTMS 0 0 0 7820 761061.375 1.0 0 0.0 3 Unmodified _DLKAQLREL_ ENSG00000171863|ENST00000645674|RPS7;ENST00000479123.1_1_2:3623223-3624265:+|nuORF 32.78568957990786 0.1150597335874693 1 {NN|[MP]|[D{I|L}]|[EV]}KAQ{I|L}{[RE]|[WV]}{I|L} 9 0 + 63.434 0.0 0.0 5.8485 5.8485 87.527 0.0 0.0 0.0 49.93887181533495 9.532796692927263 9.532796692927263 9.208187539523747 0 0.0 1.6989700043360187 0.3054621874040891 0.8494850021680094 + + {NN|[MP]|[D{I|L}]|[EV]}KAQ{I|L}{[RE]|[WV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}KA[AG]{I|L}{[RE]|[WV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}KAQ[KG]VN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}Q{I|L}{[RE]|[WV]}{I|L} 5.8485;4.9995;4.1786;2.3909 +;-;-;- + 60 + 1 2.144 51860.0 1.0 4301 3520 7820 DOHH2_400M_050219_1,7823 DOHH2_400M_050219_1,7823,DLKAQLREL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7824 43.814 75.0 767840.0 25 0 82769.0 + 18003 KSDLFFHDY 9 89 586.2748235299109 0 586.2748901247978 PEAK CID FTMS 0 0 0 7820 462538.1875 0.2256409457428941 -2 0.11895751953125 4 Unmodified _KSDLFFHDY_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 53.40400417844725 0.023745606374537 1 {M(Oxidation (M))|F}{M(Oxidation (M))|F}HD 4 5 28.404 0.0 0.0 2.4266 0.0 0.0 443.23597410884673 178.05140100650627 621.287375115353 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 + {M(Oxidation (M))|F}{M(Oxidation (M))|F}HD 2.4266 + + 135 + 1 2.144 47889.4 1.0 4302 3520 7820 DOHH2_400M_050219_1,7824 DOHH2_400M_050219_1,7824,KSDLFFHDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7825 43.82 353.0 268170.0 25 0 11870.0 -1 0 102 873.9142427395126 1745.813932545825 2 874.4169799685478 MULTI CID FTMS 0 0 0 7820 285953.59375 0.3591690904309394 2 -0.1848793029785156 5 1 [MN]PN{I|L}NEAQ 9 -1 69.377 0.0 0.0 3.9739 0.0 0.0 0.0 731.3471790205105 731.3471790205105 30.692672072328904 0.0 0.0 0.0 0 0.75 1.5228787452803376 0.0 0.805462187404089 [MN]PN{I|L}NEAQ 3.9739 - 544 + 1 2.144 68741.9 1.0 4303 3520 7820 DOHH2_400M_050219_1,7825 DOHH2_400M_050219_1,7825, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7826 43.826 331.0 308610.0 25 0 28489.0 + 29989 QTDIQGALSAY 11 135 583.7883472155372 1165.5621414978743 2 583.7886230349541 MULTI CID FTMS 0 0 0 7820 239948.640625 0.3110927283121349 -2 0.11895751953125 6 Unmodified _QTDIQGALSAY_ ENSG00000198730|ENST00000361367|CTR9 75.5705956163825 0.0162609445057862 1 [HS]D{I|L}AG{M(Oxidation (M))|F}VSAY 11 5 [HS] + + 55.599 -2.007 -0.8956 4.7702 4.7702 55.819 0.0 0.0 0.0 0.0 26.05774396488272 0.0 0.0 0 0.2396518287104437 0.0 1.079689690656103 0.0 [HS]D{I|L}AG{M(Oxidation (M))|F}VSAY 4.7702 - 2900 + 1 2.144 80786.3 1.0 4304 3520 7820 DOHH2_400M_050219_1,7826 DOHH2_400M_050219_1,7826,QTDIQGALSAY True True QTDIQGALSAY 43.826492 583.788623034954 5458724.5 7820.0 ENSG00000198730|ENST00000361367|CTR9 6.247886339823405 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7827 43.832 307.0 268790.0 25 0 18625.0 10606 FVLNHLLR 8 102 506.308746529901 1010.602940126602 2 506.3093139529228 MULTI CID FTMS 0 0 0 7820 223374.109375 0.8829844524075597 -1 0.0552330017089843 7 Unmodified _FVLNHLLR_ ENST00000510413.5_2_4:151829615-151829891:-|nuORF 32.116972079565 0.368454113111938 1 V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 8 4 + 80.793 0.0 0.0 7.9946 7.9946 93.638 0.0 0.0 0.0 62.37707810942369 20.043423914887995 20.043423914887995 9.262137858390815 0 1.2302046884880935 0.0 0.0 0.9386218330464624 V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;V{M(Oxidation (M))|F}N{I|L}{I|L}[RH]{I|L};V{M(Oxidation (M))|F}GG{I|L}{I|L}[RH]{I|L} 7.9946;7.0781;5.7442;4.8277 -;-;-;- 148 + 1 2.144 69079.3 1.0 4305 3520 7820 DOHH2_400M_050219_1,7827 DOHH2_400M_050219_1,7827,FVLNHLLR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7828 43.846 800.0 291760.0 25 0 22963.0 + + 42368 YSEVLTDTRGLY 12 142 708.8544848814798 1415.6944168297596 2 708.8548461794853 MULTI CID FTMS 0 0 0 7820 131546.984375 0.4455838752861573 -1 0.0552330017089843 8 Carbamidomethyl (C) _VTDIYLC(Carbamidomethyl (C))EKLY_ nc|ENSG00000131188|Q8TB68-2|PRR7;ENSG00000131188|ENST00000323249|PRR7 47.594388314883695 0.1309523012099263 1 YSEV{I|L}TDTP[KT]Y 12 -1 + 117.17 0.0 0.0 8.2764 8.2764 91.146 0.0 0.0 0.0 75.93198592911136 15.64667259123027 15.64667259123027 8.366516419698087 0 2.048455006504028 1.5228787452803376 1.555462187404089 0.6549471895720985 YSEV{I|L}TDTP[KT]Y;YSEV{I|L}TD[VS]Q{I|L}Y;YSEV{I|L}TDT[RH][VP];YSEV{I|L}T[YK]VEW;YSEV{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[TV]|[{I|L}S]}[MT];YSEV{I|L}TP{[ES]|[DT]|[{I|L}C]}[KT]Y;YSEV{I|L}TP[RH]EW;YSEV{I|L}TP{[HG]|PP}VEW;YSEV{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{NN|[MP]|[D{I|L}]|[EV]}{[CT]|[{M(Oxidation (M))|F}G]};{NN|[MP]|[D{I|L}]|[EV]}S{I|L}{[SA]|[TG]}HT{I|L}VE[MT] 8.2764;7.6854;6.8952;6.7125;6.7047;6.6015;6.4998;6.2042;5.8298;5.6727 -;-;-;-;-;-;-;-;-;- 6682 + 1 2.144 168206.7 0.699999988079071 4306 3520 7820 DOHH2_400M_050219_1,7828 DOHH2_400M_050219_1,7828,VTDIYLCEKLY False False YSEVLTDTRGLY 43.845921 708.854846179485 1751633.0 7820.0 nc|ENSG00000131188|Q8TB68-2|PRR7;;ENSG00000131188|ENST00000323249|PRR7 11.13292376200358 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7829 43.86 800.0 150970.0 25 0 12873.0 + 18981 LDFRNMDLY 9 140 601.7769834629229 1201.5394139926457 2 601.7758666872978 MULTI CID FTMS 0 0 0 7820 126985.546875 0.9895143133075116 -1 0.0552330017089843 9 Oxidation (M) _LDFRNM(Oxidation (M))DLY_ REV__ENSG00000104142|ENST00000220509|VPS18 46.020951573049366 0.0490941689151868 1 {NN|[MP]|[D{I|L}]|[EV]}KT{I|L}[DC][MT]Y 10 -1 + 45.345 0.0 0.0 3.7739 3.7739 69.725 0.0 0.0 0.0 5.6473289863156 5.749008104970969 5.6473289863156 0.3836439183553608 0 0.0 1.5228787452803376 1.2491348669726232 0.0 {NN|[MP]|[D{I|L}]|[EV]}KT{I|L}[DC][MT]Y;{NN|[MP]|[D{I|L}]|[EV]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}TK{I|L}[DC][MT]Y;{[TV]|[{I|L}S]}EK{I|L}[DC][MT]Y;[K{I|L}]DT{I|L}[DC][MT]Y;[K{I|L}]D{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}[{M(Oxidation (M))|F}V][R{M(Oxidation (M))|F}]D{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}K[MN][C(Carbamidomethyl (C))M]KY;{NN|[MP]|[D{I|L}]|[EV]}K[VP]SD{[YC]|[HE]}Y;{[QN]|[E{I|L}]|[KN]}SK{I|L}[DC][MT]Y 3.7739;3.742;3.4072;2.7596;2.5064;2.4745;2.2733;2.244;1.9276;1.8892 -;-;-;-;-;-;-;-;-;- 692 1 2.144 91251.4 0.6600000262260437 4307 3520 7820 DOHH2_400M_050219_1,7829 DOHH2_400M_050219_1,7829,LDFRNMDLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7830 43.874 800.0 106140.0 25 0 12500.0 + 7033 EELDPESREYW 11 106 726.8178534997045 1451.6211540662089 2 726.8166992068291 MULTI CID FTMS 0 0 0 7820 112670.25 0.1943520810284405 2 -0.1848793029785156 10 Unmodified _EELDPESREYW_ ENSG00000183617|ENST00000330133|MRPL54 42.312485326615175 0.1767732348921932 1 EE{I|L}DPE 6 5 52.893 0.0 0.0 3.6437 0.0 0.0 0.0 736.3082995473574 736.3082995473574 7.68513939877888 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.4247425010840047 0.0 + EE{I|L}DPE 3.6437 + + 418 + 1 2.144 63891.6 0.6499999761581421 4308 3520 7820 DOHH2_400M_050219_1,7830 DOHH2_400M_050219_1,7830,EELDPESREYW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7832 43.878 53.0 951360.0 25 0 51853.0 -1 MYFWKRFCFWK 11 60 857.9015278765635 1713.7885028199269 2 857.9025756716728 MULTI CID FTMS 0 0 0 7831 775698.5 0.5018029231030978 2 -0.2208137512207031 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 1 [MN]PN{I|L}NAD[YV][SG]N{I|L} 14 -1 72.858 0.0 0.0 4.2513 0.0 0.0 0.0 208.0730379693969 208.0730379693969 52.90948200479491 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 1.274227503252014 [MN]PN{I|L}NAD[YV][SG]N{I|L} 4.2513 - 309 + 1 2.144 41611.4 1.0 4309 3521 7831 DOHH2_400M_050219_1,7832 DOHH2_400M_050219_1,7832,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7833 43.88 60.0 932680.0 25 0 205820.0 30993 RLDRVHIH 8 78 523.3034874834204 1044.5924220336408 2 523.3036987185478 MULTI CID FTMS 0 0 0 7831 637735.5 0.2240799446876253 9 -1.0664024353027344 2 Unmodified _RLDRVHIH_ ENSG00000172270|ENST00000333511|BSG 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.144 48701.3 1.0 4310 3521 7831 DOHH2_400M_050219_1,7833 DOHH2_400M_050219_1,7833,RLDRVHIH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7834 43.884 197.0 614250.0 25 0 36059.0 + 25967 NLPPHIIRL 9 108 358.2254054873107 1071.6543870621322 3 358.2251769900322 MULTI CID FTMS 0 0 0 7831 360746.3125 0.3098538282370124 8 -0.9422531127929688 3 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 17.44264345198275 0.3645313841742926 1 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}R{I|L} 9 0 + 55.501 0.0 0.0 5.179 5.179 78.06 0.0 0.0 0.0 42.401638848139726 1.758825435160233 1.758825435160233 3.0102999566398125 0 0.25 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PP{I|L}H{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PH{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PPH{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}R{I|L} 5.179;4.8981;4.6172;4.3363;3.4293 +;-;-;-;- + 109 + 1 2.144 106262.4 1.0 4311 3521 7831 DOHH2_400M_050219_1,7834 DOHH2_400M_050219_1,7834,NLPPHIIRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7835 43.888 206.0 351140.0 25 0 35235.0 + 6473 EAGGRFVAF 9 103 477.2453532868307 952.4761536404616 2 477.2458068728447 MULTI CID FTMS 0 0 0 7831 215592.71875 0.5308730837902411 -1 0.0684890747070312 4 Unmodified _EAGGRFVAF_ ENSG00000070010|ENST00000263202|UFD1;nc|ENSG00000070010|Q92890-1|UFD1 34.10243960390752 0.1078313939113124 1 EA 2 7 33.898 0.0 0.0 3.5589 0.0 0.0 0.0 749.3746431940061 749.3746431940061 4.684307281548598 0.0 0.0 0.0 0 0.2215141619232908 1.5228787452803376 0.0 0.0 + EA 3.5589 + + 57 + 1 2.144 61470.8 1.0 4312 3521 7831 DOHH2_400M_050219_1,7835 DOHH2_400M_050219_1,7835,EAGGRFVAF True True EAGGRFVAF 43.887569 477.245806872845 2423879.0 7831.0 nc|ENSG00000070010|Q92890-1|UFD1;;ENSG00000070010|ENST00000263202|UFD1 3.511489470799764 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7836 43.891 188.0 383860.0 25 0 38055.0 -1 VCVQSVLRA 9 102 516.2850015602011 1030.555450187202 2 516.2844726443291 MULTI CID FTMS 0 0 0 7831 209031.96875 1.0 0 0.0 5 Carbamidomethyl (C) _VC(Carbamidomethyl (C))VQSVLRA_ ENST00000607711.1_1_6:15244923-15245223:-|nuORF 30.63653989081413 0.1413794767160703 1 [TA]WQSV{I|L}AR 9 -1 + 72.467 0.0 0.0 7.0319 7.0319 87.383 0.0 0.0 0.0 59.36842074522231 17.725672864477943 17.725672864477943 6.465912507003608 0 0.2742275032520141 1.5228787452803376 0.3807196863200844 0.9876954943324544 [TA]WQSV{I|L}AR;[TA]DAQSV{I|L}AR;[TA]W[AG]SV{I|L}AR;[TA]DA[AG]SV{I|L}AR;[TA]WK{[DA]|[EG]}{I|L}AR;[TA]W[WK]{I|L}AR;[TA]DAK{[DA]|[EG]}{I|L}AR;[TA]DA[WK]{I|L}AR;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[RE]|[WV]}KW[PG];[C(Carbamidomethyl (C))Q]KKKW[PG] 7.0319;6.4045;6.1384;5.5152;4.8263;4.5065;4.1988;3.8738;1.8147;1.0882 -;-;-;-;-;-;-;-;-;- 112 + 1 2.144 59642.6 1.0 4313 3521 7831 DOHH2_400M_050219_1,7836 DOHH2_400M_050219_1,7836,VCVQSVLRA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7837 43.905 800.0 162490.0 25 0 30669.0 + 34675 SPRPRLPPRL 10 151 594.8694854066116 1187.724417880023 2 594.8697387576103 MULTI CID FTMS 0 0 0 7831 158963.828125 0.7459561567448029 -2 0.1237220764160156 6 Unmodified _SPRPRLPPRL_ REV__ENST00000397637.5_1_21:48056153-48056219:+|nuORF 3.2813086475875832 0.7114585191678878 1 AY 2 -1 17.959 0.0 0.0 1.512 0.0 0.0 935.6127978622482 0.0 935.6127978622482 0.0 10.612431371158737 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 1.512 - 75 + 1 2.144 98393.8 0.699999988079071 4314 3521 7831 DOHH2_400M_050219_1,7837 DOHH2_400M_050219_1,7837,SPRPRLPPRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7838 43.916 634.0 220560.0 25 0 44147.0 + 18837 LASPHSPIL 9 165 467.77163131226393 933.528709691328 2 467.7716857790947 MULTI CID FTMS 0 0 0 7831 128692.484375 0.0071264002851501 -4 0.2796821594238281 7 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 44.40701690623563 0.0526327925666318 1 [TA][VP]HPS{I|L}{I|L} 9 4 + 55.184 0.0 0.0 5.9113 5.9113 78.784 0.0 0.0 0.0 1.5079736512598032 16.478174818886373 1.5079736512598032 1.5079736512598032 0 0.9247425010840048 0.5086383061657274 1.674742501084005 0.0 [TA][VP]HPS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]PS{I|L}{I|L};[VP]TAHPS{I|L}{I|L};[PS]{I|L}AHPS{I|L}{I|L};{[TV]|[{I|L}S]}PAHPS{I|L}{I|L};[PS]H[{I|L}A]PS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}T][PG]{I|L}{I|L};[{I|L}A][PS]HPS{I|L}{I|L};[PG][{I|L}T]HPS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L} 5.9113;5.7498;5.5875;5.0077;4.7828;4.7149;4.6238;4.5547;4.3499;4.0377 -;-;-;-;-;-;-;-;-;- 1055 1 2.144 114643.2 1.0 4315 3521 7831 DOHH2_400M_050219_1,7838 DOHH2_400M_050219_1,7838,LASPHSPIL True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7839 43.93 800.0 188430.0 25 0 30555.0 + 644 AELLSFLSKGL 11 156 589.342815811877 1176.671078690554 2 589.3428832888603 MULTI CID FTMS 0 0 0 7831 127754.4296875 0.1115482410860274 -6 0.4658088684082031 8 Unmodified _AELLSFLSKGL_ REV__ENSG00000170786|ENST00000303749|SDR16C5;REV__nc|ENSG00000170786|Q8N3Y7-2|SDR16C5 2.735195868890462 0.8622431031272658 1 Y 1 -1 11.109 0.0 0.0 0.94412 0.0 0.0 995.5969342587164 0.0 995.5969342587164 0.0 0.2717883116129638 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.94412 - 154 + 1 2.144 115348.2 0.6200000047683716 4316 3521 7831 DOHH2_400M_050219_1,7839 DOHH2_400M_050219_1,7839,AELLSFLSKGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7840 43.944 800.0 114540.0 25 0 11079.0 + 16263 IVSLVGLFIY 10 142 562.3434318231215 1122.6723107130429 2 562.3439819216728 MULTI CID FTMS 0 0 0 7831 107353.734375 1.0 0 0.0 9 Unmodified _IVSLVGLFIY_ REV__ENSG00000169208|ENST00000641040|OR10G3 7.910154910731844 0.6900473968920092 1 Y 1 -1 12.764 0.0 0.0 1.1369 0.0 0.0 941.5979221405804 0.0 941.5979221405804 0.0 1.926754406820086 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1369 + + 104 + 1 2.144 73320.4 0.5699999928474426 4317 3521 7831 DOHH2_400M_050219_1,7840 DOHH2_400M_050219_1,7840,IVSLVGLFIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7841 43.949 263.0 195500.0 25 0 18727.0 + 8788 EVVNDLNTL 9 105 508.7660373684669 1015.517521803734 2 508.7664977908134 MULTI CID FTMS 0 0 0 7831 93718.3125 1.0 0 0.0 10 Unmodified _EVVNDLNTL_ ENSG00000198795|ENST00000361524|ZNF521 15.847184025352805 0.4077185912009129 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L} 3 6 30.458 0.0 0.0 2.9992 0.0 0.0 0.0 671.3294161432249 671.3294161432249 8.89075625191822 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L} 2.9992 - 115 + 1 2.144 41932.2 1.0 4318 3521 7831 DOHH2_400M_050219_1,7841 DOHH2_400M_050219_1,7841,EVVNDLNTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7842 43.952 71.0 850400.0 25 0 99694.0 + -1 FPRIRLCV 8 90 530.8096633494597 1059.6047737657193 2 530.8098632693291 MULTI CID FTMS 0 0 0 7831 338045.0 0.8645194763512353 -2 0.1237220764160156 11 Carbamidomethyl (C) _FPRIRLC(Carbamidomethyl (C))V_ REV__ENSG00000138182|ENST00000371728|KIF20B;REV__nc|ENSG00000138182|Q96Q89-2|KIF20B;REV__nc|ENSG00000138182|Q96Q89-3|KIF20B;REV__nc|ENSG00000138182|Q96Q89-4|KIF20B 5.760428011301431 0.7893668129297577 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V]{M(Oxidation (M))|F} 5 -1 11.707 0.0 0.0 1.1048 0.0 0.0 0.0 453.2415560358032 453.2415560358032 8.212112250009653 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V]{M(Oxidation (M))|F} 1.1048 - 84 + 1 2.144 52020.5 1.0 4319 3521 7831 DOHH2_400M_050219_1,7842 DOHH2_400M_050219_1,7842,FPRIRLCV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7843 43.966 800.0 236260.0 25 0 8943.8 -1 0 154 974.1235667627697 2919.3488708885084 3 974.1252929568292 MULTI CID FTMS 0 0 0 7831 95006.171875 0.2299497592416023 -2 0.1237220764160156 12 1 NH{I|L}QS{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}D[PS]QS{[QS]|[NT]} 15 -1 52.626 0.0 0.0 1.8027 0.0 0.0 1236.5285106363583 0.0 1236.5285106363583 0.0 21.37584911586483 0.0 0.0 0 0.0 0.0 1.3243923658886183 1.174742501084005 NH{I|L}QS{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}D[PS]QS{[QS]|[NT]} 1.8027 - 6949 + 1 2.144 124943.2 0.5600000023841858 4320 3521 7831 DOHH2_400M_050219_1,7843 DOHH2_400M_050219_1,7843, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7844 43.968 126.0 474510.0 25 0 82045.0 + 19005 DLYIRPNI 8 78 502.281731388653 1002.548909844106 2 502.2827636599541 MULTI CID FTMS 0 0 0 7831 135792.203125 0.3977057114445346 -1 0.0684890747070312 13 Unmodified _LDIYRNPL_ ENSG00000092201|ENST00000216297|SUPT16H 38.15118350030904 0.2652218139009398 1 {NN|[MP]|[D{I|L}]|[EV]}Y{I|L}R[NP]{I|L} 8 2 + 54.403 0.0 0.0 5.4265 5.4265 78.982 0.0 0.0 0.0 42.18433447093204 2.140012553530965 2.140012553530965 3.0102999566398125 0 0.7742275032520141 2.0 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}Y{I|L}R[NP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}YR[NP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}[VG][NP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}Y[VG][NP]{I|L} 5.4265;5.1262;4.5026;4.2023 -;+;-;- + 118 + 1 2.144 52842.7 1.0 4321 3521 7831 DOHH2_400M_050219_1,7844 DOHH2_400M_050219_1,7844,LDIYRNPL False False DLYIRPNI 43.968179 502.282763659954 1744406.25 7831.0 ENSG00000092201|ENST00000216297|SUPT16H 4.652050018310547 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7845 43.976 449.0 146380.0 25 0 10508.0 + 33870 SLFFLIFT 8 112 494.28266431100514 986.5507756888104 2 494.2823058962822 MULTI CID FTMS 0 0 0 7831 106684.40625 0.3068008781194124 6 -0.7477951049804688 14 Unmodified _SLFFLIFT_ REV__ENST00000497004.5_1_3:158289136-158315942:+|nuORF 9.347437153973935 0.7675937258251505 1 {I|L} 1 -1 12.474 0.0 0.0 1.2644 0.0 0.0 855.45568093959 0.0 855.45568093959 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2644 + + 31 + 1 2.144 55057.7 1.0 4322 3521 7831 DOHH2_400M_050219_1,7845 DOHH2_400M_050219_1,7845,SLFFLIFT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7846 43.99 800.0 70508.0 25 0 3722.4 + 45633 YVMASTYFGLW 11 115 669.3154785037041 0 669.3154785037041 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _YVMASTYFGLW_ REV__ENSG00000074855|ENST00000159087|ANO8;REV__nc|ENSG00000074855|Q9HCE9-2|ANO8 6.2057823575117 0.47618401536486 1 Y 1 -1 3.9794 0.0 0.0 0.29772 0.0 0.0 204.09609265018304 966.4347628229124 1170.5308554730957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.29772 + + 10 + 1 2.144 48289.6 0.5099999904632568 4323 3521 7831 DOHH2_400M_050219_1,7846 DOHH2_400M_050219_1,7846,YVMASTYFGLW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7848 43.995 12.0 3742200.0 25 0 400540.0 + 14271 IEHGIITNW 9 71 541.78520523617 1081.55585753914 2 541.7858154177666 MULTI CID FTMS 0 0 0 7847 3800896.0 0.5527636502799488 1 -0.1044235229492187 1 Unmodified _IEHGIITNW_ ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF 26.88365393820708 0.1891292719743517 1 G{I|L}VTNW 6 4 55.75 0.0 0.0 5.1547 0.0 0.0 393.2018870581286 0.0 393.2018870581286 0.0 38.743434768119016 0.0 0.0 0 0.8807196863200843 0.0 0.8807196863200843 0.0 G{I|L}VTNW 5.1547 - 117 1 2.146 43230.3 1.0 4324 3522 7847 DOHH2_400M_050219_1,7848 DOHH2_400M_050219_1,7848,IEHGIITNW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7849 43.996 47.0 1089300.0 25 0 70902.0 + 29436 QLFVRAQEL 9 85 552.3140774104465 1102.613601887693 2 552.3141967654228 MULTI CID FTMS 0 0 0 7847 819624.6875 0.2773801420785878 2 -0.2389793395996093 2 Unmodified _QLFVRAQEL_ ENSG00000149806|ENST00000529639|FAU;ENST00000531357.1_1_11:64889042-64889375:-|nuORF 30.63653989081413 0.1413794767160703 1 [Q{I|L}]{M(Oxidation (M))|F}V 4 5 34.169 0.0 0.0 3.0989 0.0 0.0 0.0 612.3116321980546 612.3116321980546 19.47621246364342 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 0.0 0.0 + [Q{I|L}]{M(Oxidation (M))|F}V 3.0989 + + 163 + 1 2.146 44906.5 1.0 4325 3522 7847 DOHH2_400M_050219_1,7849 DOHH2_400M_050219_1,7849,QLFVRAQEL False True QLFVRAQEL 43.996041 552.314196765423 32092154.0 7847.0 ENST00000531357.1_1_11:64889042-64889375:-|nuORF;;ENSG00000149806|ENST00000529639|FAU 4.515569925308228 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7850 43.997 37.0 1090900.0 25 0 74578.0 -1 0 57 959.1135481789956 2874.318815137187 3 959.4490844607352 MULTI CID FTMS 0 0 0 7847 2136757.75 1.0 0 0.0 3 1 [NP]{I|L}N 4 -1 13.188 0.0 0.0 0.45881 0.0 0.0 0.0 2433.072421664784 2433.072421664784 1.5051499783199045 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}N 0.45881 - 58 1 2.146 35482.5 1.0 4326 3522 7847 DOHH2_400M_050219_1,7850 DOHH2_400M_050219_1,7850, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7851 43.998 39.0 1392400.0 25 0 232500.0 + 14889 ILLENFSAEK 10 62 582.3190991693846 1162.623645405569 2 582.3193847537041 MULTI CID FTMS 0 0 0 7847 1099074.375 1.0 0 0.0 4 Unmodified _ILLENFSAEK_ ENST00000560979.1_1_15:49715501-49715549:+|nuORF 23.80106514851385 0.4339316747945569 1 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}S{[CP]|[EA]}K 10 0 + 80.61 0.0 0.0 6.9335 6.9335 90.006 0.0 0.0 0.0 64.62434335926098 1.638568026386693 1.638568026386693 9.164539485499262 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + + {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}S{[CP]|[EA]}K;{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}S{[CP]|[EA]}K 6.9335;6.1452 +;- + 86 + 1 2.146 46295.5 1.0 4327 3522 7847 DOHH2_400M_050219_1,7851 DOHH2_400M_050219_1,7851,ILLENFSAEK False True ILLENFSAEK 43.998412 582.319384753704 6345739.5 7847.0 ENST00000560979.1_1_15:49715501-49715549:+|nuORF 5.854475975036621 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7852 44.0 90.0 701620.0 25 0 128850.0 -1 PPAVRRSA 8 86 448.2593154232584 894.5040779133168 2 448.2589294314384 MULTI CID FTMS 0 0 0 7847 636080.625 0.6855638064419606 -1 0.1163902282714843 5 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PPAVRRSA_ nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3 0.7936320650641473 0.8195151834710337 1 Y 1 -1 2.4743 0.0 0.0 0.27661 0.0 0.0 621.4039019873387 107.0144060724242 728.4183080597629 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.27661 - 6 + 1 2.146 53606.6 1.0 4328 3522 7847 DOHH2_400M_050219_1,7852 DOHH2_400M_050219_1,7852,PPAVRRSA False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7853 44.003 110.0 696850.0 25 0 77894.0 + 31763 RSDVEILGY 9 76 526.2744340429388 1050.5343151526774 2 526.2745849490166 MULTI CID FTMS 0 0 0 7847 472327.6875 0.5817103581987464 -1 0.1163902282714843 6 Unmodified _RSDVEILGY_ ENSG00000028116|ENST00000340157|VRK2;nc|ENSG00000028116|Q86Y07-2|VRK2;nc|ENSG00000028116|Q86Y07-3|VRK2;nc|ENSG00000028116|Q86Y07-4|VRK2;nc|ENSG00000028116|Q86Y07-5|VRK2 29.84058131909904 0.1515068451768857 1 VE{I|L}{I|L}GY 6 3 61.899 0.0 0.0 5.8921 0.0 0.0 358.16050917793126 0.0 358.16050917793126 0.0 49.59183145787911 0.0 0.0 0 1.424742501084005 0.0 0.3494850021680094 0.0 + VE{I|L}{I|L}GY 5.8921 + + 99 1 2.146 63527.2 1.0 4329 3522 7847 DOHH2_400M_050219_1,7853 DOHH2_400M_050219_1,7853,RSDVEILGY False True RSDVEILGY 44.002728 526.274584949017 4412887.5 7847.0 nc|ENSG00000028116|Q86Y07-5|VRK2;;nc|ENSG00000028116|Q86Y07-3|VRK2;;ENSG00000028116|ENST00000340157|VRK2;;nc|ENSG00000028116|Q86Y07-4|VRK2;;nc|ENSG00000028116|Q86Y07-2|VRK2 7.157593409220378 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7854 44.007 240.0 313950.0 25 0 21218.0 + 10446 FTEQWTDGY 9 113 573.7407571183243 1145.4669613034484 2 573.7412597537041 MULTI CID FTMS 0 0 0 7847 285058.4375 1.0 0 0.0 7 Unmodified _FTEQWTDGY_ ENSG00000146872|ENST00000346027|TLK2;nc|ENSG00000146872|Q86UE8-3|TLK2;nc|ENSG00000146872|Q86UE8|TLK2 46.020951573049366 0.0490941689151868 1 [{M(Oxidation (M))|F}T]EQWTDGY 9 0 [{M(Oxidation (M))|F}T]EQWT + + 26.198 20.067 2.5326 2.2871 2.2871 49.181 0.0 0.0 0.0 0.0 6.131134461430534 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + + [{M(Oxidation (M))|F}T]EQWTDGY 2.2871 + + 266 + 1 2.146 60300.9 1.0 4330 3522 7847 DOHH2_400M_050219_1,7854 DOHH2_400M_050219_1,7854,FTEQWTDGY True True FTEQWTDGY 44.007222 573.741259753704 1641032.75 7847.0 nc|ENSG00000146872|Q86UE8-3|TLK2;;nc|ENSG00000146872|Q86UE8|TLK2;;ENSG00000146872|ENST00000346027|TLK2 5.788757801055908 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7855 44.012 268.0 442700.0 25 0 57860.0 + 10004 FPKWKPGSL 9 114 353.8712968621763 1058.5920611867289 3 353.8709289431572 MULTI CID FTMS 0 0 0 7847 272071.5 0.9340365232032166 -1 0.1163902282714843 8 Unmodified _FPKWKPGSL_ ENSG00000170312|ENST00000395284|CDK1;nc|ENSG00000170312|P06493-2|CDK1 31.26834338654808 0.1333407332142048 1 [KP]W{M(Oxidation (M))|F}KKPE 8 6 + 43.982 0.0 0.0 4.1548 4.1548 74.123 0.0 0.0 0.0 2.831122966544072 3.055074169904444 2.831122966544072 2.831122966544072 0 0.7887254899964358 0.0 0.0 0.0 [KP]W{M(Oxidation (M))|F}KKPE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WK]KKPE;[WK]P{M(Oxidation (M))|F}KKPE;{M(Oxidation (M))|F}PKWK[PG]S{I|L};{M(Oxidation (M))|F}PK{[DA]|[EG]}K[PG]S{I|L};{M(Oxidation (M))|F}PKK[VS][PG]S{I|L} 4.1548;3.8873;3.4829;3.477;2.6072;2.3939 -;-;-;+;-;- + 152 1 2.146 102123.8 1.0 4331 3522 7847 DOHH2_400M_050219_1,7855 DOHH2_400M_050219_1,7855,FPKWKPGSL False True FPKWKPGSL 44.012176 353.870928943157 2235026.0 7847.0 nc|ENSG00000170312|P06493-2|CDK1;;ENSG00000170312|ENST00000395284|CDK1 6.153281211853027 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7856 44.016 184.0 380200.0 25 0 69569.0 + 27963 PLVRQSGR 8 95 456.7728046265565 0 456.7729675173759 PEAK CID FTMS 0 0 0 7847 223629.09375 0.5249791912211236 -1 0.1163902282714843 9 Unmodified _PLVRQSGR_ REV__ENSG00000157782|ENST00000316803|CABP1 2.577480529830294 0.5910327097116076 1 V 1 -1 3.4949 0.0 0.0 0.3834 0.0 0.0 673.3995846175678 136.04078088931877 809.4403655068866 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.3834 + + 9 + 1 2.146 59102.9 1.0 4332 3522 7847 DOHH2_400M_050219_1,7856 DOHH2_400M_050219_1,7856,PLVRQSGR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7857 44.022 347.0 313560.0 25 0 36723.0 + 8670 EVIGKITAL 9 149 472.2948812457975 942.5752095583948 2 472.2949706912041 MULTI CID FTMS 0 0 0 7847 206957.515625 1.0 0 0.0 10 Unmodified _EVIGKITAL_ ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10 34.40172386719151 0.1061884637610825 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}GK{I|L}TA{I|L} 9 0 + 55.856 0.0 0.0 5.9259 5.9259 92.983 0.0 0.0 0.0 18.98062535455437 14.973024840566469 14.973024840566469 55.85647216221645 0 0.3807196863200844 2.0 0.4247425010840047 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}{I|L}GK{I|L}TA{I|L} 5.9259 + + 294 + 1 2.146 85965.0 1.0 4333 3522 7847 DOHH2_400M_050219_1,7857 DOHH2_400M_050219_1,7857,EVIGKITAL True True EVIGKITAL 44.021987 472.294970691204 1118521.0 7847.0 ENSG00000086827|ENST00000200135|ZW10;;nc|ENSG00000086827|O43264-2|ZW10 3.3272993167241416 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7858 44.036 800.0 210100.0 25 0 8851.1 + 30520 REKMTQIMF 9 170 592.3011504873193 1182.5877480414383 2 592.3018066287041 MULTI CID FTMS 0 0 0 7847 152749.84375 1.0 0 0.0 11 Unmodified _REKMTQIMF_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 63.960520009940105 0.0238892913700936 1 [TA]G{I|L}AMTQ{I|L}M{M(Oxidation (M))|F} 11 5 + 59.993 0.0 0.0 5.073 5.073 75.432 0.0 0.0 0.0 1.389189146035676 14.19016691817962 1.389189146035676 1.389189146035676 0 0.8494850021680094 0.0 1.78422879366991 0.7059771852360797 [TA]G{I|L}AMTQ{I|L}M{M(Oxidation (M))|F};[QT]{I|L}AMTQ{I|L}M{M(Oxidation (M))|F};[Q{I|L}]TAMTQ{I|L}M{M(Oxidation (M))|F};{[RE]|[WV]}KMTQ{I|L}M{M(Oxidation (M))|F};[QT]{I|L}AMT[AG]{I|L}M{M(Oxidation (M))|F};[TA]G{I|L}AMTQM{I|L}{M(Oxidation (M))|F};[Q{I|L}]TAMT[AG]{I|L}M{M(Oxidation (M))|F};[QT]{I|L}AMTQM{I|L}{M(Oxidation (M))|F};[Q{I|L}]TAMTQM{I|L}{M(Oxidation (M))|F};{[RE]|[WV]}KMT[AG]{I|L}M{M(Oxidation (M))|F} 5.073;4.9556;4.8401;4.6622;4.1806;4.1206;4.0652;4.0032;3.8877;3.8836 -;-;-;+;-;-;-;-;-;- + 2607 1 2.146 125992.6 0.6899999976158142 4334 3522 7847 DOHH2_400M_050219_1,7858 DOHH2_400M_050219_1,7858,REKMTQIMF True True REKMTQIMF 44.035818 592.301806628704 1137746.625 7847.0 ENST00000480297.5_1_10:90700968-90708687:-|nuORF;;ENSG00000188219|ENST00000683005|POTEE;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;;ENSG00000222038|ENST00000409602|POTEJ;;ENSG00000169067|ENST00000423391|ACTBL2;;ENSG00000163017|ENST00000345517|ACTG2;;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENSG00000075624|ENST00000646664|ACTB;;ENSG00000196604|ENST00000409914|POTEF;;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;;ENSG00000107796|ENST00000224784|ACTA2;;ENSG00000159251|ENST00000290378|ACTC1;;ENSG00000196834|ENST00000451531|POTEI;;ENSG00000184009|ENST00000573283|ACTG1 4.661303520202637 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7859 44.041 264.0 329000.0 25 0 25749.0 + 36753 TEAAHPIRLF 10 128 385.54888933701466 1153.624838611244 3 385.5485412478447 MULTI CID FTMS 0 0 0 7847 128100.4921875 0.8713539349475737 -1 0.1163902282714843 12 Unmodified _TEAAHPIRLF_ ENSG00000174231|ENST00000304992|PRPF8 15.738622578938676 0.5834632108994704 1 WWHP 4 8 16.198 0.0 0.0 1.4041 0.0 0.0 0.0 544.3252657525999 544.3252657525999 2.703037561203842 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WWHP 1.4041 - 47 + 1 2.146 72722.3 1.0 4335 3522 7847 DOHH2_400M_050219_1,7859 DOHH2_400M_050219_1,7859,TEAAHPIRLF False True TEAAHPIRLF 44.040695 385.548541247845 1237743.0 7847.0 ENSG00000174231|ENST00000304992|PRPF8 3.8245890537897744 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7860 44.055 800.0 152880.0 25 0 7385.8 + 23432 LTEVDNYHFY 10 132 650.7962003897419 1299.5778478462837 2 650.7969238162041 MULTI CID FTMS 0 0 0 7847 118854.8359375 1.0 0 0.0 13 Unmodified _LTEVDNYHFY_ ENSG00000116044|ENST00000397062|NFE2L2;nc|ENSG00000116044|Q16236-2|NFE2L2;nc|ENSG00000116044|Q16236-3|NFE2L2 66.45667989310934 0.0196491505995134 1 {I|L}TEVDNYH{M(Oxidation (M))|F}Y 10 0 + 93.358 0.0 0.0 7.1837 7.1837 85.27 0.0 0.0 0.0 23.83152719846376 3.679767852945943 3.679767852945943 3.679767852945943 0 0.7302046884880937 2.0 0.4247425010840047 0.3494850021680094 + + {I|L}TEVDNYH{M(Oxidation (M))|F}Y;{I|L}TEVDNYHY{M(Oxidation (M))|F};{I|L}TEVDNVD[PS][DP];{I|L}TEVDNVD[DP][PS];{I|L}TEVDGGYH{M(Oxidation (M))|F}Y;{I|L}TE[QA]EYH{M(Oxidation (M))|F}Y;{I|L}TEVDGGYHY{M(Oxidation (M))|F};{I|L}TE[QA]EYHY{M(Oxidation (M))|F};{I|L}TEVDNVH[CS][PS];{I|L}TEVDGGVD[PS][DP] 7.1837;6.9005;6.6875;6.4976;6.2096;6.2041;5.9264;5.921;5.8989;5.7185 +;-;-;-;-;-;-;-;-;- + 2139 + 1 2.146 95297.9 0.6399999856948853 4336 3522 7847 DOHH2_400M_050219_1,7860 DOHH2_400M_050219_1,7860,LTEVDNYHFY True True LTEVDNYHFY 44.054532 650.796923816204 900793.375 7847.0 nc|ENSG00000116044|Q16236-3|NFE2L2;;ENSG00000116044|ENST00000397062|NFE2L2;;nc|ENSG00000116044|Q16236-2|NFE2L2 8.725335439046225 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7861 44.068 800.0 114540.0 25 0 8207.9 + 17806 KQLDDLKVEL 10 145 600.8448982688619 1199.6752436045238 2 601.3460571169853 MULTI CID FTMS 0 0 0 7847 105832.109375 1.0 0 0.0 14 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 36.39500950444726 0.1956349533321693 1 {I|L}KQTQNKVE{I|L} 10 5 + 72.878 0.0 0.0 6.0748 6.0748 81.708 0.0 0.0 0.0 48.185041910667366 18.767507096020992 18.767507096020992 3.101438424529988 0 2.504432191740108 0.0 1.774227503252014 0.5 {I|L}KQTQNKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}[KQ]KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVE{I|L};[KQ]{I|L}TQNKVE{I|L};{I|L}KQT[AG]NKVE{I|L};{I|L}KQTQGGKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{[QV]|[N{I|L}]|[RA]|[KV]}EKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KVE{I|L};[KQ]{I|L}T[AG]NKVE{I|L};[KQ]{I|L}TQGGKVE{I|L} 6.0748;5.8163;5.6313;5.3821;5.3109;5.3109;5.1295;5.0487;4.6182;4.6182 -;-;-;-;-;-;-;-;-;- 1604 + 1 2.146 67107.6 0.6000000238418579 4337 3522 7847 DOHH2_400M_050219_1,7861 DOHH2_400M_050219_1,7861,KQLDDLKVEL False True KQLDDLKVEL 44.068363 600.8451 621418.5625 7847.0 ENST00000487431.1_1_9:127620199-127623861:-|nuORF;;ENSG00000136942|ENST00000348462|RPL35;;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;;ENST00000495728.1_1_9:127623696-127624209:-|nuORF;;ENST00000450819.1_1_1:237144684-237145005:+|nuORF 4.389404535293579 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7862 44.076 339.0 248930.0 25 0 16602.0 + 526 AEIAESVQAF 10 129 532.7679682567076 1063.5213835802151 2 532.7677490115166 MULTI CID FTMS 0 0 0 7847 107320.9375 0.7380304324434505 -1 0.1163902282714843 15 Unmodified _AEIAESVQAF_ ENSG00000103591|ENST00000261880|AAGAB;ENST00000558725.5_1_15:67519241-67546969:-|nuORF 27.628801355627647 0.3479284626772844 1 {[CP]|[EA]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}E{M(Oxidation (M))|F} 9 4 + 28.955 0.0 0.0 2.7226 2.7226 70.763 0.0 0.0 0.0 4.542513289233273 7.147642715192507 4.542513289233273 3.0102999566398125 0 0.0 0.5528419686577808 0.2614393726401688 0.0 {[CP]|[EA]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}E{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}AP{M(Oxidation (M))|F}[RN]{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}[WR]NE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}E{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}AE[KQ]E{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][RV]P[RN]{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][RV][HT]E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AAP{M(Oxidation (M))|F}[RN]{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[WE]V{I|L}E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[WR]NE{M(Oxidation (M))|F} 2.7226;2.4395;2.3965;2.2939;2.1084;2.059;2.059;2.0108;2.005;1.9678 -;-;-;-;-;-;-;-;-;- 519 1 2.146 69379.0 1.0 4338 3522 7847 DOHH2_400M_050219_1,7862 DOHH2_400M_050219_1,7862,AEIAESVQAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7863 44.086 551.0 145680.0 25 0 16104.0 + 30058 QVAILRTPA 9 134 484.7978447384923 967.5811365437846 2 484.7977172732353 MULTI CID FTMS 0 0 0 7847 99912.734375 1.0 0 0.0 16 Unmodified _QVAILRTPA_ ENST00000262809.8_1_19:18554702-18554960:-|nuORF 22.736283301280096 0.2418982879461534 1 {[QV]|[N{I|L}]|[RA]|[KV]}A{I|L} 4 5 41.682 0.0 0.0 4.3079 0.0 0.0 0.0 553.3059176080686 553.3059176080686 27.078343878162343 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}A{I|L} 4.3079 + + 225 + 1 2.146 64843.9 1.0 4339 3522 7847 DOHH2_400M_050219_1,7863 DOHH2_400M_050219_1,7863,QVAILRTPA False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7864 44.094 494.0 484830.0 25 0 74620.0 + 29023 QEDWPPKPVY 10 123 629.8089311610792 1257.6033093889582 2 629.8094360232353 MULTI CID FTMS 0 0 0 7847 97031.484375 0.6883724420679457 -1 0.1163902282714843 17 Unmodified _QEDWPPKPVY_ ENST00000444129.6_1_12:21654122-21654191:-|nuORF 60.07390631473393 0.0363923079357811 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DWPPK[VP]Y 10 0 + 29.913 0.0 0.0 2.3786 2.3786 76.034 0.0 0.0 0.0 15.933721837015046 4.1297125968911566 4.1297125968911566 9.164539485499253 0 0.7059771852360797 0.0 0.0 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DWPPK[VP]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D{[DA]|[EG]}PPK[VP]Y 2.3786;1.6499 +;- + 182 + 1 2.146 181631.6 1.0 4340 3522 7847 DOHH2_400M_050219_1,7864 DOHH2_400M_050219_1,7864,QEDWPPKPVY True True QEDWPPKPVY 44.094401 629.809436023235 1200209.0 7847.0 ENST00000444129.6_1_12:21654122-21654191:-|nuORF 8.61419153213501 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7866 44.099 51.0 791320.0 25 0 97198.0 + 18004 KSDLFFHDY 9 71 586.2748235299109 0 586.2747680544853 PEAK CID FTMS 0 0 0 7865 790153.0625 0.3854619772430014 1 -0.1345558166503906 1 Unmodified _KSDLFFHDY_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 27.22323531849824 0.1355901598355292 1 SD{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HD 7 2 32.172 0.0 0.0 2.7485 0.0 0.0 128.09856115677172 178.05158411197502 306.1501452687468 0.0 0.0 0.0 0.0 0 2.1237125054200234 0.0 0.0 0.0 + SD{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HD 2.7485 + + 120 + 1 2.146 36619.1 1.0 4341 3523 7865 DOHH2_400M_050219_1,7866 DOHH2_400M_050219_1,7866,KSDLFFHDY False True KSDLFFHDY 44.099188 586.274768054485 25599826.0 7865.0 ENSG00000035928|ENST00000349703|RFC1;;nc|ENSG00000035928|P35251|RFC1 8.572587013244629 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7867 44.101 54.0 449930.0 25 0 52136.0 + 19794 LGSLSELMLL 10 51 538.3089033351041 1074.603253737008 2 538.3096191287041 MULTI CID FTMS 0 0 0 7865 1065769.0 0.9550135694412756 1 -0.1345558166503906 2 Unmodified _LGSLSELMLL_ REV__ENST00000481804.5_1_16:772680-773505:-|nuORF;REV__ENST00000482878.5_1_16:772872-773550:-|nuORF 1.4819007175156935 0.719781833666733 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.146 25668.3 1.0 4342 3523 7865 DOHH2_400M_050219_1,7867 DOHH2_400M_050219_1,7867,LGSLSELMLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7868 44.102 18.0 2629300.0 25 0 650480.0 + 33699 SKGALNSSKVV 11 54 545.3163032505478 1088.6180535678957 2 545.3171874880791 MULTI CID FTMS 0 0 0 7865 3301769.0 1.0 0 0.0 3 Unmodified _SKGALNSSKVV_ REV__ENSG00000276231|ENST00000619866|PIK3R6 0.9622753412299312 0.8706078577147922 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.146 41353.3 1.0 4343 3523 7865 DOHH2_400M_050219_1,7868 DOHH2_400M_050219_1,7868,SKGALNSSKVV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7869 44.103 23.0 2477700.0 25 0 319140.0 + 23342 LTDDGNKWLY 10 85 612.7984736152538 1223.5823942973077 2 612.7989379763603 MULTI CID FTMS 0 0 0 7865 2461605.5 0.1252337316322829 -1 0.1044235229492187 4 Unmodified _LTDDGNKWLY_ ENSG00000175166|ENST00000310118|PSMD2;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2 45.739877483867886 0.1051543674217965 1 [W{I|L}]WDDT{I|L}{I|L}Y 9 6 + 66.213 0.0 0.0 5.4114 5.4114 75.889 0.0 0.0 0.0 8.9828069691076 20.99616348435412 8.9828069691076 0.796896906561031 0 0.9247425010840048 1.3979400086720375 0.7614393726401688 0.0 [W{I|L}]WDDT{I|L}{I|L}Y;[W{I|L}]WDD{I|L}T{I|L}Y;[W{I|L}]W{I|L}DDT{I|L}Y;[W{I|L}]DDWT{I|L}{I|L}Y;[W{I|L}]DDW{I|L}T{I|L}Y;[W{I|L}]WD{I|L}DT{I|L}Y;[W{I|L}]DDADT{I|L}{I|L}Y;[W{I|L}]DDAD{I|L}T{I|L}Y;[W{I|L}]DDTW{I|L}{I|L}Y;[W{I|L}]DDT{I|L}W{I|L}Y 5.4114;5.3463;5.1549;5.0815;5.0163;4.9563;4.9246;4.8595;4.8354;4.5243 -;-;-;-;-;-;-;-;-;- 447 1 2.146 49172.3 1.0 4344 3523 7865 DOHH2_400M_050219_1,7869 DOHH2_400M_050219_1,7869,LTDDGNKWLY True True LTDDGNKWLY 44.102938 612.79893797636 396236112.0 7865.0 ENST00000466987.1_1_3:184021130-184021370:+|nuORF;;ENSG00000175166|ENST00000310118|PSMD2;;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;;nc|ENSG00000175166|Q13200-3|PSMD2;;nc|ENSG00000175166|Q13200-2|PSMD2 6.256491820017497 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7870 44.104 52.0 833890.0 25 0 132910.0 + 476 AEGEINNVQW 10 74 580.2727379292887 1158.5309229253774 2 580.2729980349541 MULTI CID FTMS 0 0 0 7865 1093742.25 1.0 0 0.0 5 Unmodified _AEGEINNVQW_ ENSG00000136485|ENST00000614556|DCAF7;nc|ENSG00000136485|P61962-2|DCAF7 51.629811660486645 0.0705852162080619 1 {[CP]|[EA]}{[DA]|[EG]}{I|L}NNVQW 10 0 + 42.382 0.0 0.0 3.6583 3.6583 74.666 0.0 0.0 0.0 1.4916623986031396 26.897737521010825 1.4916623986031396 4.3933269383026285 0 0.6989700043360187 0.0 0.3252574989159953 0.8494850021680094 + + {[CP]|[EA]}{[DA]|[EG]}{I|L}NNVQW;{[DA]|[EG]}{[CP]|[EA]}{I|L}NNVQW;{[CP]|[EA]}{[DA]|[EG]}{I|L}NGGVQW;{[CP]|[EA]}{[DA]|[EG]}{I|L}GGNVQW;{[CP]|[EA]}V{[CP]|[EA]}NNVQW;{[DA]|[EG]}{[CP]|[EA]}{I|L}NGGVQW;{[DA]|[EG]}{[CP]|[EA]}{I|L}GGNVQW;{[CP]|[EA]}V[WQ]NVQW;{[DA]|[EG]}{I|L}{[CP]|[EA]}NNVQW;[Y{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}]NVQW 3.6583;3.2791;2.8672;2.8672;2.7059;2.488;2.488;2.4019;2.3266;2.2104 +;-;-;-;-;-;-;-;-;- + 249 1 2.146 38317.3 1.0 4345 3523 7865 DOHH2_400M_050219_1,7870 DOHH2_400M_050219_1,7870,AEGEINNVQW True True AEGEINNVQW 44.104305 580.272998034954 6475920.5 7865.0 ENSG00000136485|ENST00000614556|DCAF7;;nc|ENSG00000136485|P61962-2|DCAF7 6.975143432617188 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7871 44.106 102.0 606480.0 25 0 112440.0 + 26352 NSKLPVLTVY 10 75 567.3295759213604 1132.6445989095207 2 567.3300048708916 MULTI CID FTMS 0 0 0 7865 518871.71875 0.4154704258954115 4 -0.5269813537597656 6 Unmodified _NSKLPVLTVY_ REV__ENST00000261313.2_1_12:118583083-118583359:+|nuORF 3.5964929083625545 0.7100006075494749 1 Y 1 -1 12.764 0.0 0.0 1.1269 0.0 0.0 951.570378183738 0.0 951.570378183738 0.0 3.367079499318155 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1269 + + 9 + 1 2.146 49612.8 1.0 4346 3523 7865 DOHH2_400M_050219_1,7871 DOHH2_400M_050219_1,7871,NSKLPVLTVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7872 44.11 197.0 331580.0 25 0 44772.0 20764 LLTATNPRN 9 85 500.2829042907332 998.5512556482664 2 500.2832519412041 MULTI CID FTMS 0 0 0 7865 247718.421875 0.3398107731174728 -2 0.2208137512207031 7 Unmodified _LLTATNPRN_ ENST00000375820.8_1_13:110802605-110802710:-|nuORF 4.3292370932331545 0.7635526921153418 1 E 1 9 7.4743 0.0 0.0 0.74851 0.0 0.0 499.2915371826229 367.1992586725219 866.4907958551448 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 E 0.74851 - 7 + 1 2.146 53925.2 1.0 4347 3523 7865 DOHH2_400M_050219_1,7872 DOHH2_400M_050219_1,7872,LLTATNPRN False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7873 44.124 800.0 132470.0 25 0 6660.6 -1 0 108 873.9142427395126 1745.813932545825 2 874.4164916872978 MULTI CID FTMS 0 0 0 7865 179474.453125 0.2254270535269204 5 -0.6153526306152344 8 1 [MN]PN{I|L}NAEQ[QP]AN{I|L}S 15 -1 91.675 0.0 0.0 5.2511 0.0 0.0 0.0 121.04113947086172 121.04113947086172 53.39764817206942 0.0 0.0 0.0 0 1.110924374808178 1.5228787452803376 0.0 1.274227503252014 [MN]PN{I|L}NAEQ[QP]AN{I|L}S 5.2511 - 4326 + 1 2.146 73750.3 0.7400000095367432 4348 3523 7865 DOHH2_400M_050219_1,7873 DOHH2_400M_050219_1,7873, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7874 44.128 180.0 301480.0 25 0 29887.0 + 12906 GYGMPRQIL 9 86 517.7759884413242 1033.5374239494483 2 517.7762939333916 MULTI CID FTMS 0 0 0 7865 142287.671875 1.0 0 0.0 9 Unmodified _GYGMPRQIL_ ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159888592-159888742:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 36.04419817259434 0.0971720506436186 1 [YG]GM{I|L} 5 4 41.95 0.0 0.0 4.0589 0.0 0.0 0.0 509.286935674475 509.286935674475 27.971062485323515 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 [YG]GM{I|L} 4.0589 - 72 + 1 2.146 44868.0 1.0 4349 3523 7865 DOHH2_400M_050219_1,7874 DOHH2_400M_050219_1,7874,GYGMPRQIL True True GYGMPRQIL 44.127592 517.776293933392 873958.3125 7865.0 ENSG00000158710|ENST00000368097|TAGLN2;;nc|ENSG00000158710|P37802-2|TAGLN2;;ENST00000478033.1_1_1:159888592-159888742:-|nuORF 4.107756773630778 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7875 44.132 234.0 237440.0 25 0 16347.0 + 29635 QMRMKWESL 9 100 403.5354529927022 1207.5845295783065 3 403.5353576540947 MULTI CID FTMS 0 0 0 7865 139407.4375 1.0 0 0.0 10 Unmodified _QMRMKWESL_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1 4.3292370932331545 0.7635526921153418 1 {I|L} 1 8 13.979 0.0 0.0 1.1576 0.0 0.0 1076.4895874169767 0.0 1076.4895874169767 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1576 + + 21 + 1 2.146 45602.1 1.0 4350 3523 7865 DOHH2_400M_050219_1,7875 DOHH2_400M_050219_1,7875,QMRMKWESL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7876 44.138 343.0 196980.0 25 0 24621.0 29194 QGHARRLVTL 10 93 575.8429105315546 1149.671268129909 2 575.8434326052666 MULTI CID FTMS 0 0 0 7865 128006.3984375 0.3088415537301271 4 -0.5269813537597656 11 Unmodified _QGHARRLVTL_ ENST00000543873.6_1_12:57503871-57504054:-|nuORF 9.38312468134398 0.6832340498775793 1 Y 1 10 12.474 0.0 0.0 1.085 0.0 0.0 968.5971236980716 0.0 968.5971236980716 0.0 2.095646538709879 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.085 - 110 + 1 2.146 54201.0 1.0 4351 3523 7865 DOHH2_400M_050219_1,7876 DOHH2_400M_050219_1,7876,QGHARRLVTL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7877 44.148 540.0 180260.0 25 0 13854.0 + 30857 RIMDPDVITGY 11 111 640.320887799456 1278.627222665712 2 640.3214599490166 MULTI CID FTMS 0 0 0 7865 113718.484375 1.0 0 0.0 12 Unmodified _RIMDPDVITGY_ ENSG00000062822|ENST00000440232|POLD1 42.312485326615175 0.1767732348921932 1 {[SA]|[TG]}Y[YR]SV{I|L}TGY 11 6 + 68.465 0.0 0.0 5.3546 5.3546 89.244 0.0 0.0 0.0 9.704326053070218 54.8199450473059 9.704326053070218 21.59379381312207 0 1.5 0.9208187539523752 0.5 0.3807196863200844 {[SA]|[TG]}Y[YR]SV{I|L}TGY;[HT]T{I|L}VS[VS]SWY;{[CP]|[EA]}{[NV]|[RG]}[WQ]V{I|L}TGY;[VP]G[MN]AASV{I|L}TGY;{[ES]|[DT]|[{I|L}C]}[HT][VS]SV{I|L}TGY;[VP]G[MN][QT]V{I|L}TGY;[PG]V[MN]AASV{I|L}TGY;[TP]ERR[KG]DTGY;[PG]V[MN][QT]V{I|L}TGY;{[SA]|[TG]}Y[YR]SV[VP][HT] 5.3546;3.6658;3.3231;3.1781;3.0628;3.0317;2.8261;2.7408;2.6798;1.266 -;-;-;-;-;-;-;-;-;- 336 1 2.146 79176.4 1.0 4352 3523 7865 DOHH2_400M_050219_1,7877 DOHH2_400M_050219_1,7877,RIMDPDVITGY False True RIMDPDVITGY 44.147709 640.321459949017 1038001.8125 7865.0 ENSG00000062822|ENST00000440232|POLD1 6.9732621510823565 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7878 44.162 800.0 281750.0 25 0 11820.0 -1 0 153 864.9095180522338 1727.8044831712675 2 865.4106933474541 MULTI CID FTMS 0 0 0 7865 105901.2578125 0.1708516065950518 -1 0.1044235229492187 13 1 [MN]PN{I|L}NEAQ 9 -1 78.937 0.0 0.0 4.5686 0.0 0.0 0.0 713.3363220022236 713.3363220022236 40.471643190459794 0.0 0.0 0.0 0 1.1549471895720984 1.5228787452803376 0.0 1.055462187404089 [MN]PN{I|L}NEAQ 4.5686 - 2689 + 1 2.146 148548.2 0.6000000238418579 4353 3523 7865 DOHH2_400M_050219_1,7878 DOHH2_400M_050219_1,7878, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7879 44.171 540.0 193820.0 25 0 27796.0 + 4773 DELEIKAYY 9 130 572.2818572912404 1142.549161649281 2 572.2812988162041 MULTI CID FTMS 0 0 0 7865 87979.3828125 1.0 0 0.0 14 Unmodified _DELEIKAYY_ ENSG00000127054|ENST00000435064|INTS11;ENST00000421495.6_1_1:1249445-1259984:-|nuORF;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;ENST00000526113.1_1_1:1250782-1259984:-|nuORF;ENST00000526904.5_1_1:1250884-1259984:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 45.69961567697781 0.0497987121815769 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E{I|L}[KA]YY 9 0 + 29.337 0.0 0.0 2.5676 2.5676 66.949 0.0 0.0 0.0 12.232810059770369 6.158650111567635 6.158650111567635 0.4575749056067515 0 1.055462187404089 0.0 0.3252574989159953 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E{I|L}[KA]YY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ERRYY;{[QN]|[E{I|L}]|[KN]}DERRYY;{[ES]|[DT]|[{I|L}C]}Q[KA]{I|L}EC[HV];{[ES]|[DT]|[{I|L}C]}QRREC[HV];{[QN]|[E{I|L}]|[KN]}[KA]{[QS]|[NT]}EC[HV];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}YY;{[ES]|[DT]|[{I|L}C]}QRRMT[HV];{[QN]|[E{I|L}]|[KN]}[KA]{[QS]|[NT]}MT[HV];{NN|[MP]|[D{I|L}]|[EV]}EERRYY 2.5676;2.5276;2.0067;1.9247;1.8799;1.7654;1.6957;1.6796;1.5651;1.348 +;-;-;-;-;-;-;-;-;- + 818 + 1 2.146 82054.2 1.0 4354 3523 7865 DOHH2_400M_050219_1,7879 DOHH2_400M_050219_1,7879,DELEIKAYY True True DELEIKAYY 44.171053 572.281298816204 563506.125 7865.0 nc|ENSG00000127054|Q5TA45-4|INTS11;;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;;ENSG00000127054|ENST00000435064|INTS11;;nc|ENSG00000127054|Q5TA45-2|INTS11;;ENST00000421495.6_1_1:1249445-1259984:-|nuORF;;nc|ENSG00000127054|Q5TA45-5|INTS11;;ENST00000526113.1_1_1:1250782-1259984:-|nuORF;;ENST00000526904.5_1_1:1250884-1259984:-|nuORF 5.329703489939372 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7880 44.186 800.0 219570.0 25 0 10563.0 + 10291 FRREWCRYRWR 11 146 857.4388840643129 1712.8632151954257 2 857.4389526247978 MULTI CID FTMS 0 0 0 7865 202311.296875 1.0 0 0.0 15 Unmodified _FRREWCRYRWR_ REV__ENST00000328599.4_1_8:125463328-125463391:+|nuORF 0.0 0.8751479354844584 1 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[{I|L}T]R[EC]{I|L}Q 15 -1 + 124.6 0.0 0.0 7.2746 7.2746 88.947 0.0 0.0 0.0 68.19785507705251 15.076958849325578 15.076958849325578 7.313411194250605 0 2.1307196863200843 1.6989700043360187 0.5 3.3505762035186217 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[{I|L}T]R[EC]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQRR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW[{I|L}T]R[EC]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQRR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAWW{I|L}[EC]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NPNAD[{I|L}T]R[EC]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}N{I|L}PNAD[{I|L}T]R[EC]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}MADQ[KP][EC]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}[Y{M(Oxidation (M))|F}]DANP{I|L}P{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NPNADQRR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 7.2746;6.8477;6.6361;6.2104;6.0656;6.0325;5.903;5.7845;5.6998;5.6055 -;-;-;-;-;-;-;-;-;- 17912 + 1 2.146 119748.5 0.7900000214576721 4355 3523 7865 DOHH2_400M_050219_1,7880 DOHH2_400M_050219_1,7880,FRREWCRYRWR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7881 44.188 77.0 490000.0 25 0 45305.0 + -1 GHFLCLPSY 9 75 547.2604134256991 0 547.2618286013603 PEAK CID FTMS 0 0 0 7865 203594.890625 1.0 0 0.0 16 Carbamidomethyl (C) _GHFLC(Carbamidomethyl (C))LPSY_ REV__ENST00000580219.5_2_17:46199002-46199104:+|nuORF 4.3292370932331545 0.3444685223463734 1 S 1 -1 1.1092 0.0 0.0 0.10153 0.0 0.0 824.40023861722 178.05074487857658 1002.4509834957964 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.10153 + + 6 + 1 2.146 33861.6 1.0 4356 3523 7865 DOHH2_400M_050219_1,7881 DOHH2_400M_050219_1,7881,GHFLCLPSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7882 44.192 209.0 221060.0 25 0 17151.0 11358 GFVKKDQLGK 10 89 560.3315725851047 1118.648592237009 2 560.3278686404228 MULTI CID FTMS 0 0 0 7865 135267.703125 1.0 0 0.0 17 Unmodified _GFVKKDQLGK_ ENSG00000145335|ENST00000394991|SNCA;nc|ENSG00000145335|P37840-2|SNCA;nc|ENSG00000145335|P37840-3|SNCA 3.2813086475875832 0.7114585191678878 1 W 1 10 12.474 0.0 0.0 1.1151 0.0 0.0 914.5580903832968 0.0 914.5580903832968 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1151 - 62 + 1 2.146 41973.2 1.0 4357 3523 7865 DOHH2_400M_050219_1,7882 DOHH2_400M_050219_1,7882,GFVKKDQLGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7883 44.2 461.0 180060.0 25 0 16836.0 + + 38790 LSEWQKELY 9 131 597.8564658077089 1193.6983786822177 2 597.8569824099541 MULTI CID FTMS 0 0 0 7865 118663.140625 0.3027232428362715 -5 0.4082603454589844 18 Unmodified _TVEGHRLKRV_ ENSG00000196453|ENST00000247930|ZNF777 6.2057823575117 0.6979311171683138 1 {I|L}CS 3 -1 23.984 0.0 0.0 2.0093 0.0 0.0 293.2657772975562 594.3110445611936 887.5768218587498 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.805462187404089 0.0 {I|L}CS 2.0093 - 468 + 1 2.146 66062.1 1.0 4358 3523 7865 DOHH2_400M_050219_1,7883 DOHH2_400M_050219_1,7883,TVEGHRLKRV False False LSEWQKELY 44.200315 597.856982409954 912939.5 7865.0 ENSG00000196453|ENST00000247930|ZNF777 6.233320077260335 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7884 44.214 800.0 166890.0 25 0 10117.0 + 32802 SEFDSISKNTW 11 162 657.3048443528721 1312.5951357725442 2 657.8068115115166 MULTI CID FTMS 0 0 0 7865 102517.78125 1.0 0 0.0 19 Unmodified _SEFDSISKNTW_ ENSG00000196821|ENST00000374023|ILRUN;nc|ENSG00000196821|Q9H6K1-2|ILRUN 53.31671820480216 0.0992620867501809 1 YY{M(Oxidation (M))|F}QNTW 7 7 47.12 0.0 0.0 3.5898 0.0 0.0 292.17422129293976 0.0 292.17422129293976 0.0 13.381725660532418 0.0 0.0 0 0.0 0.0 2.1237125054200234 0.0 YY{M(Oxidation (M))|F}QNTW 3.5898 - 7387 + 1 2.146 101052.6 0.5899999737739563 4359 3523 7865 DOHH2_400M_050219_1,7884 DOHH2_400M_050219_1,7884,SEFDSISKNTW True True SEFDSISKNTW 44.214152 657.806811511517 545874.875 7865.0 ENSG00000196821|ENST00000374023|ILRUN;;nc|ENSG00000196821|Q9H6K1-2|ILRUN 3.739211320877075 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7885 44.229 800.0 157110.0 25 0 19031.0 + + 27258 SGAPHAILL 9 146 439.75907262103897 877.503592308878 2 439.7582275271416 MULTI CID FTMS 0 0 0 7865 95177.40625 1.0 0 0.0 20 Unmodified _PHALGTGLL_ ENST00000482694.1_1_2:85577073-85578124:-|nuORF;ENSG00000042445|ENST00000295802|RETSAT;nc|ENSG00000042445|Q6NUM9-2|RETSAT 24.67388899826682 0.2172451872415813 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{[QS]|[NT]}{I|L}{I|L}{I|L} 8 -1 + 33.677 0.0 0.0 3.8378 3.8378 74.526 0.0 0.0 0.0 6.510234424404686 19.138568026386693 6.510234424404686 3.7488359616255735 0 0.4247425010840047 0.0 0.3054621874040891 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{[QS]|[NT]}{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}QS{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}[AG]S{I|L}{I|L};[{I|L}P][Y{M(Oxidation (M))|F}]{I|L}{I|L}{I|L};[PA][YK]SS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{I|L}{[QS]|[NT]}{I|L};{[{M(Oxidation (M))|F}D]|MM}[RK]S{I|L}{I|L};[{I|L}P][HA]QS{I|L}{I|L};[PA][YK]{I|L}{[CA]|SS}{I|L} 3.8378;3.4106;2.363;2.3551;2.2156;1.6132;1.4759;1.1864;1.0731;0.85227 -;-;-;-;-;-;-;-;-;- 255 1 2.146 100839.9 0.8799999952316284 4360 3523 7865 DOHH2_400M_050219_1,7885 DOHH2_400M_050219_1,7885,PHALGTGLL False False SGAPHAILL 44.229142 439.758227527142 544014.5 7865.0 ENST00000482694.1_1_2:85577073-85578124:-|nuORF;;ENSG00000042445|ENST00000295802|RETSAT;;nc|ENSG00000042445|Q6NUM9-2|RETSAT 1.947200040022532 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7887 44.234 5.5 10403000.0 25 0 3311900.0 + 18838 LASPHSPIL 9 80 467.77163131226393 933.528709691328 2 467.7716857790947 MULTI CID FTMS 0 0 0 7886 12450478.0 0.6894504399410939 -1 0.1345558166503906 1 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 63.562846038646086 0.0241094678104353 1 [{I|L}A][PS]H[PS]{I|L}{I|L} 9 0 + 49.52 0.0 0.0 5.3046 5.3046 77.565 0.0 0.0 0.0 2.4073369851453066 15.899736471157397 2.4073369851453066 2.4073369851453066 0 0.9247425010840048 1.154901959985743 1.6382104921644451 0.0 + + [{I|L}A][PS]H[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}T[TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPS[TA]{I|L}{I|L};[{I|L}A][PS]H{I|L}[PS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]{I|L}[PS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA][PS]{I|L}{I|L};[VP][TA]H[PS]{I|L}{I|L};[TA][VP]H[PS]{I|L}{I|L} 5.3046;5.0468;4.4034;4.3519;4.34;4.1887;4.0821;4.0349;3.8789;3.7855 +;-;-;-;-;-;-;-;-;- + 500 1 2.137 51985.7 1.0 4361 3524 7886 DOHH2_400M_050219_1,7887 DOHH2_400M_050219_1,7887,LASPHSPIL True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7888 44.235 56.0 1643100.0 25 0 165190.0 37836 TLTQVTQRP 9 128 522.2958429068678 1042.5771328805356 2 522.2963134646416 MULTI CID FTMS 0 0 0 7886 839851.375 0.6307301223363599 2 -0.2841033935546875 2 Unmodified _TLTQVTQRP_ ENSG00000169933|ENST00000675598|FRMPD4;nc|ENSG00000169933|Q14CM0|FRMPD4 7.910154910731844 0.6385446671287552 1 [W{I|L}]WDDT{I|L} 7 7 33.773 0.0 0.0 3.2393 0.0 0.0 0.0 110.12890340293043 110.12890340293043 25.189097685623523 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 [W{I|L}]WDDT{I|L} 3.2393 - 987 1 2.137 75222.0 1.0 4362 3524 7886 DOHH2_400M_050219_1,7888 DOHH2_400M_050219_1,7888,TLTQVTQRP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7889 44.238 122.0 680930.0 25 0 144400.0 + 17044 KKRVGNGP 8 87 428.2618807432492 854.5092085532983 2 428.2617980837822 MULTI CID FTMS 0 0 0 7886 512920.09375 0.102925794142028 -1 0.1345558166503906 3 Unmodified _KKRVGNGP_ REV__ENST00000314261.11_1_3:101117824-101177831:-|nuORF 0.6903765706972694 0.8201419426409876 1 P 1 -1 0.3786 0.0 0.0 0.044307 0.0 0.0 634.377477451539 120.05090509586172 754.4283825474007 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.044307 + + 5 + 1 2.137 72198.6 1.0 4363 3524 7886 DOHH2_400M_050219_1,7889 DOHH2_400M_050219_1,7889,KKRVGNGP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7890 44.243 281.0 303260.0 25 0 14089.0 -1 0 95 952.7757044723068 2855.3052840171204 3 953.4442626833916 MULTI CID FTMS 0 0 0 7886 415045.78125 1.0 0 0.0 4 1 {I|L}SQ 3 -1 16.198 0.0 0.0 0.56729 0.0 0.0 1204.4907711979336 1319.6129626175064 2524.10373381544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}SQ 0.56729 - 323 + 1 2.137 64626.1 1.0 4364 3524 7886 DOHH2_400M_050219_1,7890 DOHH2_400M_050219_1,7890, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7891 44.246 131.0 540390.0 25 0 77179.0 + 20255 LLDPRFEGY 9 88 555.2853285931624 1108.5561042531249 2 555.2853271365166 MULTI CID FTMS 0 0 0 7886 306292.5 1.0 0 0.0 5 Unmodified _LLDPRFEGY_ ENSG00000120526|ENST00000239690|NUDCD1 26.88365393820708 0.1891292719743517 1 {I|L}{I|L}DHTD 6 6 46.968 0.0 0.0 4.2368 0.0 0.0 0.0 411.2243746393188 411.2243746393188 32.36371556024956 0.0 0.0 0.0 0 1.242992819099939 2.0 0.4247425010840047 0.0 {I|L}{I|L}DHTD 4.2368 - 182 + 1 2.137 55967.6 1.0 4365 3524 7886 DOHH2_400M_050219_1,7891 DOHH2_400M_050219_1,7891,LLDPRFEGY False True LLDPRFEGY 44.24556 555.2849 1690380.25 7886.0 ENSG00000120526|ENST00000239690|NUDCD1 4.187828699747722 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7892 44.25 255.0 275390.0 25 0 48195.0 + 883 AEVIRPSLRH 10 91 589.342815811877 1176.671078690554 2 589.3427001833916 MULTI CID FTMS 0 0 0 7886 300606.6875 0.262473460461176 -3 0.3553695678710937 6 Unmodified _AEVIRPSLRH_ REV__ENST00000440593.3_1_19:13255325-13260573:-|nuORF 1.4819007175156935 0.719781833666733 1 Y 1 -1 10.969 0.0 0.0 0.93221 0.0 0.0 995.5969189999274 0.0 995.5969189999274 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.93221 - 14 + 1 2.137 59798.8 1.0 4366 3524 7886 DOHH2_400M_050219_1,7892 DOHH2_400M_050219_1,7892,AEVIRPSLRH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7893 44.254 166.0 527760.0 25 0 72668.0 26581 NVLVRYPSL 9 109 530.8096633494597 1059.6047737657193 2 530.8106567263603 MULTI CID FTMS 0 0 0 7886 262932.125 0.6724251002704301 1 -0.13580322265625 7 Unmodified _NVLVRYPSL_ ENST00000451422.1_1_3:15778702-15838004:-|nuORF;ENST00000498524.5_1_3:15727727-15838055:-|nuORF;nc|ENSG00000206560|O15084-1|ANKRD28 3.944395688203298 0.7769873103969335 1 W 1 9 10.485 0.0 0.0 0.98948 0.0 0.0 855.5142566532178 0.0 855.5142566532178 0.0 0.5697167615341847 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.98948 - 34 + 1 2.137 70035.8 1.0 4367 3524 7886 DOHH2_400M_050219_1,7893 DOHH2_400M_050219_1,7893,NVLVRYPSL False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_1 7894 44.256 130.0 341770.0 25 0 22693.0 + + 5616 KEGEFVAQF 9 86 527.7639623370264 0 527.7644531130791 PEAK CID FTMS 0 0 0 7886 268417.5625 1.0 0 0.0 8 Unmodified _DPATTKFQF_ ENSG00000170515|ENST00000303305|PA2G4;nc|ENSG00000170515|Q9UQ80-2|PA2G4;ENST00000414718.1_1_20:12361512-12361782:+|nuORF 10.823927491677226 0.3028200641087142 1 AV{M(Oxidation (M))|F} 3 -1 11.682 0.0 0.0 1.1089 0.0 0.0 293.13559224577926 440.1784762018188 733.3140684475981 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AV{M(Oxidation (M))|F} 1.1089 - 18 + 1 2.137 40012.1 1.0 4368 3524 7886 DOHH2_400M_050219_1,7894 DOHH2_400M_050219_1,7894,DPATTKFQF False False KEGEFVAQF 44.256235 527.764453113079 9787479.0 7886.0 ENSG00000170515|ENST00000303305|PA2G4;;nc|ENSG00000170515|Q9UQ80-2|PA2G4;;ENST00000414718.1_1_20:12361512-12361782:+|nuORF 3.492853045463562 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7895 44.26 197.0 572320.0 25 0 53606.0 + -1 AELPGVSRW 9 111 507.7720060879509 0 507.7719909548759 PEAK CID FTMS 0 0 0 7886 244255.671875 0.3134773480175504 -1 0.1345558166503906 9 Carbamidomethyl (C) _AEIPVGIC(Carbamidomethyl (C))R_ nc|ENSG00000167397|Q9BQB6-2|VKORC1;nc|ENSG00000167397|Q9BQB6-3|VKORC1 25.399314129420983 0.152124705672316 1 {I|L}PR 3 -1 29.253 0.0 0.0 2.8862 0.0 0.0 200.0786991032731 444.1998385065063 644.2785376097794 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.4247425010840047 {I|L}PR 2.8862 - 122 + 1 2.137 91931.1 1.0 4369 3524 7886 DOHH2_400M_050219_1,7895 DOHH2_400M_050219_1,7895,AEIPVGICR False False AELPGVSRW 44.259998 507.771990954876 4933280.0 7886.0 nc|ENSG00000167397|Q9BQB6-2|VKORC1;;nc|ENSG00000167397|Q9BQB6-3|VKORC1 4.313564856847127 2.0 False 9.0 True nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7896 44.274 800.0 328780.0 25 0 35788.0 + 19447 LFDDMEKTIKQ 11 146 684.346069505017 1366.677586076834 2 684.3455078005791 MULTI CID FTMS 0 0 0 7886 219723.3125 0.4081583298677457 -1 0.1345558166503906 10 Unmodified _LFDDMEKTIKQ_ REV__ENSG00000140650|ENST00000268261|PMM2;REV__ENST00000564030.5_1_16:8891706-8900277:+|nuORF;REV__nc|ENSG00000140650|O15305-2|PMM2 18.373094154950223 0.6529654022026722 1 {M(Oxidation (M))|F}{I|L}DDS{I|L}PNGVKY 12 -1 + 89.454 0.0 0.0 6.5454 6.5454 83.915 0.0 0.0 0.0 3.861698586525336 3.861698586525336 3.861698586525336 3.861698586525336 0 1.7302046884880935 0.0 0.4247425010840047 0.3807196863200844 {M(Oxidation (M))|F}{I|L}DDS{I|L}PNGVKY;{[TV]|[{I|L}S]}[HK]NP{I|L}SDD{I|L}E;{M(Oxidation (M))|F}{I|L}DDS{I|L}PNGVYK;{M(Oxidation (M))|F}{I|L}DDS{I|L}PGGGVKY;{[QV]|[N{I|L}]|[RA]|[KV]}[HT]NP{I|L}SDD{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}[HN]TP{I|L}SDD{I|L}E;{[TV]|[{I|L}S]}[HK]GGP{I|L}SDD{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YR]P{I|L}SDD{I|L}E;{M(Oxidation (M))|F}{I|L}DDS{I|L}PGGGVYK;{[QV]|[N{I|L}]|[RA]|[KV]}[HT]GGP{I|L}SDD{I|L}E 6.5454;6.2628;5.9849;5.8796;5.8767;5.6564;5.5971;5.4927;5.3192;5.211 -;-;-;-;-;-;-;-;-;- 2223 + 1 2.137 188986.0 0.8600000143051147 4370 3524 7886 DOHH2_400M_050219_1,7896 DOHH2_400M_050219_1,7896,LFDDMEKTIKQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7897 44.278 208.0 162020.0 25 0 14564.0 33057 SEQIKARLS 9 73 516.2961052951372 1030.5776576570745 2 516.2963744997978 MULTI CID FTMS 0 0 0 7886 225225.328125 0.5910758356770237 -1 0.1345558166503906 11 Unmodified _SEQIKARLS_ ENSG00000142235|ENST00000600059|LMTK3 7.910154910731844 0.6385446671287552 1 {I|L} 1 8 10.596 0.0 0.0 1.0282 0.0 0.0 899.4825476490649 0.0 899.4825476490649 0.0 5.111381973555762 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0282 + + 14 + 1 2.137 32053.5 1.0 4371 3524 7886 DOHH2_400M_050219_1,7897 DOHH2_400M_050219_1,7897,SEQIKARLS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7898 44.287 495.0 496990.0 25 0 123730.0 + 27538 PKTVLLTT 8 145 436.7748483389031 0 436.7747375369072 PEAK CID FTMS 0 0 0 7886 208710.4375 0.1112662803595448 -1 0.1345558166503906 12 Unmodified _PKTVLLTT_ REV__ENSG00000164654|ENST00000340080|MIOS;REV__nc|ENSG00000164654|Q9NXC5-2|MIOS 2.302733041254933 0.5920993303473642 1 A 1 -1 5.7969 0.0 0.0 0.66514 0.0 0.0 436.27148515261246 361.20273767642817 797.4742228290406 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 A 0.66514 - 15 + 1 2.137 192797.8 1.0 4372 3524 7886 DOHH2_400M_050219_1,7898 DOHH2_400M_050219_1,7898,PKTVLLTT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7899 44.29 180.0 290660.0 25 0 19275.0 + 16643 KEKFPINGW 9 102 559.8026237858987 1117.5906946385974 2 559.8032714724541 MULTI CID FTMS 0 0 0 7886 167105.46875 1.0 0 0.0 13 Unmodified _KEKFPINGW_ ENSG00000063601|ENST00000445323|MTMR1;nc|ENSG00000063601|Q13613-2|MTMR1;nc|ENSG00000063601|Q13613|MTMR1 38.61474834105838 0.0830609365873449 1 {M(Oxidation (M))|F}[{I|L}P]NGW 6 3 32.546 0.0 0.0 2.9121 0.0 0.0 385.22541251144736 0.0 385.22541251144736 0.0 16.170664226808626 0.0 0.0 0 1.2614393726401687 0.0 0.0 0.5941876774005248 + {M(Oxidation (M))|F}[{I|L}P]NGW 2.9121 + + 266 + 1 2.137 45575.6 1.0 4373 3524 7886 DOHH2_400M_050219_1,7899 DOHH2_400M_050219_1,7899,KEKFPINGW True True KEKFPINGW 44.290033 559.803271472454 674385.5 7886.0 ENSG00000063601|ENST00000445323|MTMR1;;nc|ENSG00000063601|Q13613-2|MTMR1;;nc|ENSG00000063601|Q13613|MTMR1 5.04539680480957 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7900 44.305 800.0 177940.0 25 0 14875.0 + 39817 VEVAEESGRLW 11 144 637.8224807214923 1273.6304085097845 2 637.8226806521416 MULTI CID FTMS 0 0 0 7886 150428.21875 1.0 0 0.0 14 Unmodified _VEVAEESGRLW_ ENSG00000113621|ENST00000358387|TXNDC15;nc|ENSG00000113621|Q96J42-2|TXNDC15 68.75988807550267 0.0359983986270074 1 VEVAEESGR{I|L}W 11 0 + 112.08 0.0 0.0 8.8004 8.8004 89.573 0.0 0.0 0.0 33.565473235138114 5.797835966168094 5.797835966168094 5.797835966168094 0 1.8494850021680087 1.6989700043360187 1.2302046884880935 0.0 + + VEVAEESGR{I|L}W;VEVAEESGRW{I|L};VEVAEG{[ES]|[DT]|[{I|L}C]}R{I|L}W;VEVAEES[RK]MP;VEVAE{[WS]|[C(Carbamidomethyl (C)){I|L}]}R{I|L}W;VEVAEESG[QT]{I|L}{I|L};VEVAEG{[ES]|[DT]|[{I|L}C]}RW{I|L};VEVAE{[WS]|[C(Carbamidomethyl (C)){I|L}]}RW{I|L};VEVAW{[ES]|[DT]|[{I|L}C]}R{I|L}W;VE[W{I|L}]ESGR{I|L}W 8.8004;8.3452;7.2039;7.1382;7.0482;7.015;6.7487;6.593;6.3541;6.0232 +;-;-;-;-;-;-;-;-;- + 1525 + 1 2.137 110811.7 0.7099999785423279 4374 3524 7886 DOHH2_400M_050219_1,7900 DOHH2_400M_050219_1,7900,VEVAEESGRLW True True VEVAEESGRLW 44.305041 637.822680652142 647894.25 7886.0 nc|ENSG00000113621|Q96J42-2|TXNDC15;;ENSG00000113621|ENST00000358387|TXNDC15 7.51145060857137 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7901 44.319 800.0 116030.0 25 0 8601.4 + 43247 WEDSSNGQMF 10 136 600.7351766260158 1199.4558003188315 2 600.7357665896416 MULTI CID FTMS 0 0 0 7886 148076.6875 1.0 0 0.0 15 Unmodified _WEDSSNGQMF_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 60.07390631473393 0.0363923079357811 1 [WE]DSSNGQM{M(Oxidation (M))|F} 10 0 + 46.979 0.0 0.0 3.9167 3.9167 71.232 0.0 0.0 0.0 1.2186754873178458 8.066884185923655 1.2186754873178458 1.2186754873178458 0 0.8182503180159344 0.0 1.174742501084005 0.9247425010840048 + + [WE]DSSNGQM{M(Oxidation (M))|F};[NG]SGDSSNGQM{M(Oxidation (M))|F};[WE]DSSNG[AG]M{M(Oxidation (M))|F};[NG]SGDSSNG[AG]M{M(Oxidation (M))|F};[NG]SGDSSGGGQM{M(Oxidation (M))|F};[WE]DSSGGGQM{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))D]SNGQM{M(Oxidation (M))|F};[NG][WC(Carbamidomethyl (C))]SNGQM{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[DC]GSNGQM{M(Oxidation (M))|F};[NG]{[C(Carbamidomethyl (C))E]|[WC]}GSNGQM{M(Oxidation (M))|F} 3.9167;3.8151;3.1527;3.0566;3.0566;2.7985;2.7416;2.7071;2.5369;2.5024 +;-;-;-;-;-;-;-;-;- + 420 1 2.137 68998.0 0.7200000286102295 4375 3524 7886 DOHH2_400M_050219_1,7901 DOHH2_400M_050219_1,7901,WEDSSNGQMF True True WEDSSNGQMF 44.318872 600.735766589642 636145.75 7886.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 6.545601526896159 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7902 44.327 488.0 171110.0 25 0 13836.0 -1 0 130 598.3022736821531 597.294997215553 1 598.3039428591728 MULTI CID FTMS 0 0 0 7886 142087.578125 1.0 0 0.0 16 1 Y 1 -1 15.485 0.0 0.0 2.5924 0.0 0.0 416.2205933843015 0.0 416.2205933843015 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5924 - 41 + 1 2.137 64303.1 1.0 4376 3524 7886 DOHH2_400M_050219_1,7902 DOHH2_400M_050219_1,7902, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7903 44.332 199.0 504830.0 25 0 42191.0 + 6743 EDNGIIKAF 9 114 503.7634805937714 1005.5124082543427 2 503.7632629275322 MULTI CID FTMS 0 0 0 7886 99957.171875 0.1969379467096471 -1 0.1345558166503906 17 Unmodified _EDNGIIKAF_ ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF 49.93300154707207 0.0405168250806675 1 AK{I|L}{I|L}GNPE 8 8 37.003 0.0 0.0 3.68 0.0 0.0 165.07950026679845 0.0 165.07950026679845 0.0 21.95394852311025 0.0 0.0 0 0.7273473230428984 0.0 0.0 0.0 AK{I|L}{I|L}GNPE 3.68 - 245 1 2.137 78267.2 1.0 4377 3524 7886 DOHH2_400M_050219_1,7903 DOHH2_400M_050219_1,7903,EDNGIIKAF True True EDNGIIKAF 44.332474 503.763262927532 2782772.25 7886.0 ENSG00000174444|ENST00000307961|RPL4;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;;ENST00000422486.1_1_3:185135660-185136437:-|nuORF 6.337532043457031 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7904 44.343 622.0 277700.0 25 0 28892.0 + 27467 PKFAIDNI 8 174 459.25648056477377 0 459.2563354372978 PEAK CID FTMS 0 0 0 7886 91892.03125 0.3530576964049239 -4 0.423858642578125 18 Unmodified _PKFAIDNI_ REV__ENSG00000163913|ENST00000348417|IFT122;REV__nc|ENSG00000163913|Q9HBG6-10|IFT122;REV__nc|ENSG00000163913|Q9HBG6-11|IFT122;REV__nc|ENSG00000163913|Q9HBG6-3|IFT122;REV__nc|ENSG00000163913|Q9HBG6-4|IFT122;REV__nc|ENSG00000163913|Q9HBG6-5|IFT122;REV__nc|ENSG00000163913|Q9HBG6-6|IFT122;REV__nc|ENSG00000163913|Q9HBG6-9|IFT122 7.910154910731844 0.5650536163073903 1 S 1 -1 4.464 0.0 0.0 0.48707 0.0 0.0 590.3291709910726 236.11301599674064 826.4421869878132 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 S 0.48707 - 29 + 1 2.137 133579.7 1.0 4378 3524 7886 DOHH2_400M_050219_1,7904 DOHH2_400M_050219_1,7904,PKFAIDNI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7905 44.351 439.0 300210.0 25 0 34365.0 13104 HEQHHQYPL 9 141 594.7814466925641 1187.5483404519282 2 594.7820312380791 MULTI CID FTMS 0 0 0 7886 160742.65625 1.0 0 0.0 19 Unmodified _HEQHHQYPL_ ENSG00000113448|ENST00000340635|PDE4D 19.256988751693697 0.3154191944385105 1 K{M(Oxidation (M))|F}DYP{I|L} 6 6 46.573 0.0 0.0 3.9218 0.0 0.0 406.18559462715 0.0 406.18559462715 0.0 23.504930719009632 0.0 0.0 0 0.805462187404089 0.0 0.6747425010840047 0.0 K{M(Oxidation (M))|F}DYP{I|L} 3.9218 - 925 1 2.137 100190.0 1.0 4379 3524 7886 DOHH2_400M_050219_1,7905 DOHH2_400M_050219_1,7905,HEQHHQYPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7906 44.365 800.0 237090.0 25 0 50304.0 -1 0 74 915.4825660113332 2743.4258686342 3 915.8178588747978 MULTI CID FTMS 0 0 0 7886 137786.9375 1.0 0 0.0 20 1 C 1 -1 3.4949 0.0 0.0 0.12739 0.0 0.0 1679.5016265461124 957.8734835260374 2637.3751100721497 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.12739 - 1 + 1 2.137 132286.2 0.5600000023841858 4380 3524 7886 DOHH2_400M_050219_1,7906 DOHH2_400M_050219_1,7906, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7908 44.37 71.0 627760.0 25 0 113750.0 40472 VINVTTHLPL 10 73 553.8305196573351 1105.64648638147 2 553.8302490115166 MULTI CID FTMS 0 0 0 7907 785739.875 0.75060777205494 1 -0.1483001708984375 1 Unmodified _VINVTTHLPL_ ENSG00000143507|ENST00000366899|DUSP10;ENST00000468085.5_1_1:221875756-221910233:-|nuORF;nc|ENSG00000143507|Q9Y6W6-2|DUSP10 1.6526216038709556 0.7189921496796233 1 K 1 10 2.2185 0.0 0.0 0.20065 0.0 0.0 735.4266510316639 239.09299646549064 974.5196474971546 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.20065 - 4 + 1 2.126 40623.5 1.0 4381 3525 7907 DOHH2_400M_050219_1,7908 DOHH2_400M_050219_1,7908,VINVTTHLPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7909 44.374 205.0 200550.0 25 0 13582.0 -1 0 68 959.1135481789956 2874.318815137187 3 959.4482299685478 MULTI CID FTMS 0 0 0 7907 314083.90625 0.146990881979953 3 -0.3449935913085937 2 1 [NP]{I|L}DY 5 -1 23.015 0.0 0.0 0.80072 0.0 0.0 0.0 2269.028639880902 2269.028639880902 19.035984316004217 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [NP]{I|L}DY 0.80072 - 121 1 2.126 38137.2 1.0 4382 3525 7907 DOHH2_400M_050219_1,7909 DOHH2_400M_050219_1,7909, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7910 44.377 165.0 416770.0 25 0 161430.0 5356 DLILAILAL 9 71 477.8140791521014 953.6136053710028 2 477.8140441775322 MULTI CID FTMS 0 0 0 7907 460867.4375 1.0 0 0.0 3 Unmodified _DLILAILAL_ ENSG00000170088|ENST00000306480|TMEM192;nc|ENSG00000170088|Q8IY95-2|TMEM192 2.059750862983233 0.8427793054688888 1 D 1 8 0.088644 0.0 0.0 0.0092956 0.0 0.0 753.496888917681 82.06698023013905 835.56386914782 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.0092956 + + 5 + 1 2.126 61254.0 1.0 4383 3525 7907 DOHH2_400M_050219_1,7910 DOHH2_400M_050219_1,7910,DLILAILAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7911 44.38 92.0 542050.0 25 0 42799.0 + 5154 DIKKELQSL 9 87 537.3137873194721 1072.613021705744 2 537.3141357302666 MULTI CID FTMS 0 0 0 7907 453983.6875 1.0 0 0.0 4 Unmodified _DIKKELQSL_ ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2 29.84058131909904 0.1515068451768857 1 D{I|L}K 3 6 43.188 0.0 0.0 4.0264 0.0 0.0 0.0 713.3851635420601 713.3851635420601 17.296962438796157 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + D{I|L}K 4.0264 + + 111 + 1 2.126 43387.8 1.0 4384 3525 7907 DOHH2_400M_050219_1,7911 DOHH2_400M_050219_1,7911,DIKKELQSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7912 44.387 410.0 348900.0 25 0 53591.0 + 6838 EEDFPSLREY 10 102 642.7902972541538 1283.5660415751074 2 642.7906982302666 MULTI CID FTMS 0 0 0 7907 258572.1875 1.0 0 0.0 5 Unmodified _EEDFPSLREY_ ENSG00000020426|ENST00000261245|MNAT1;ENST00000556764.5_1_14:61201502-61275155:+|nuORF;nc|ENSG00000020426|P51948-2|MNAT1 43.9818466556824 0.1155196613165264 1 EED{M(Oxidation (M))|F}PS{I|L}{[RE]|[WV]}Y 10 0 + 61.718 0.0 0.0 4.8083 4.8083 87.218 0.0 0.0 0.0 44.18011552152894 7.090606190045108 7.090606190045108 20.34980137622901 0 0.75 1.6989700043360187 0.3807196863200844 0.4247425010840047 + + EED{M(Oxidation (M))|F}PS{I|L}{[RE]|[WV]}Y;EED{M(Oxidation (M))|F}PS{I|L}[HV]DP;{[ET]|[MV]}[HV]{I|L}SP{M(Oxidation (M))|F}D[HC];[QA]{[CA]|SS}{M(Oxidation (M))|F}PS{I|L}{[RE]|[WV]}Y;[QA]{[CA]|SS}{M(Oxidation (M))|F}PS{I|L}[HV]DP;[PS][R{I|L}]{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}D[HC] 4.8083;3.2229;3.1359;2.5173;2.2583;2.0059 +;-;-;-;-;- + 119 + 1 2.126 110829.3 1.0 4385 3525 7907 DOHH2_400M_050219_1,7912 DOHH2_400M_050219_1,7912,EEDFPSLREY True True EEDFPSLREY 44.386855 642.790698230267 886359.0625 7907.0 nc|ENSG00000020426|P51948-2|MNAT1;;ENST00000556764.5_1_14:61201502-61275155:+|nuORF;;ENSG00000020426|ENST00000261245|MNAT1 8.03486426671346 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7913 44.392 274.0 478030.0 25 0 24751.0 + 25968 NLPPHIIRL 9 122 358.2254054873107 1071.6543870621322 3 358.2250244021416 MULTI CID FTMS 0 0 0 7907 250389.875 0.2150659857972547 12 -1.0609245300292969 6 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 13.614867670302877 0.4681447649821485 1 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L} 6 3 49.411 0.0 0.0 4.6107 0.0 0.0 0.0 397.2576673552823 397.2576673552823 36.64701525743869 0.0 0.0 0.0 0 0.25 2.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L} 4.6107 + + 141 + 1 2.126 110824.1 1.0 4386 3525 7907 DOHH2_400M_050219_1,7913 DOHH2_400M_050219_1,7913,NLPPHIIRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7914 44.406 800.0 133000.0 25 0 10662.0 -1 0 131 963.7848039125288 2888.3325823377863 3 964.4545165896416 MULTI CID FTMS 0 0 0 7907 210869.78125 1.0 0 0.0 7 1 [MN]P 3 -1 29.181 0.0 0.0 1.0103 0.0 0.0 0.0 2543.172858787258 2543.172858787258 7.983324797206279 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [MN]P 1.0103 - 1609 1 2.126 78318.5 0.800000011920929 4387 3525 7907 DOHH2_400M_050219_1,7914 DOHH2_400M_050219_1,7914, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7915 44.42 800.0 294830.0 25 0 13531.0 + 38486 TSEAPFLHY 9 196 532.7566015886456 1063.498650244091 2 532.7560302615166 MULTI CID FTMS 0 0 0 7907 188704.0 1.0 0 0.0 8 Unmodified _TSEAPFLHY_ ENSG00000102879|ENST00000219150|CORO1A 86.12129899796855 0.0160336270647063 1 TSEAP{M(Oxidation (M))|F}{I|L}HY 9 0 + 90.628 0.0 0.0 8.5217 8.5217 86.983 0.0 0.0 0.0 36.47817481888637 3.4242268082220733 3.4242268082220733 3.4242268082220733 0 1.079689690656103 2.0 0.4247425010840047 0.0 + + TSEAP{M(Oxidation (M))|F}{I|L}HY;TSEAP{M(Oxidation (M))|F}{I|L}YH;TSEAP{M(Oxidation (M))|F}{I|L}NW;TSEAP{M(Oxidation (M))|F}{I|L}GGW;TSEAP{M(Oxidation (M))|F}{[WN]|[YH]}{I|L};TS{M(Oxidation (M))|F}A[EP]{I|L}HY;TSEAP{M(Oxidation (M))|F}[RD]AA;TSEA[H{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F};TS{M(Oxidation (M))|F}A[EP]{I|L}YH;TS{M(Oxidation (M))|F}A[EP]{I|L}NW 8.5217;8.1997;8.0382;7.1724;6.7867;6.0988;6.0463;5.9821;5.7768;5.6154 +;-;-;-;-;-;-;-;-;- + 1598 + 1 2.126 176770.1 0.7300000190734863 4388 3525 7907 DOHH2_400M_050219_1,7915 DOHH2_400M_050219_1,7915,TSEAPFLHY True True TSEAPFLHY 44.419578 532.756030261517 1548308.5 7907.0 ENSG00000102879|ENST00000219150|CORO1A 7.961791515350342 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7916 44.429 511.0 225760.0 25 0 24546.0 31225 RLRKALREF 9 137 594.8694854066116 1187.724417880023 2 594.8698608279228 MULTI CID FTMS 0 0 0 7907 143553.9375 0.673643461950842 2 -0.256622314453125 9 Unmodified _RLRKALREF_ ENSG00000148541|ENST00000618804|FAM13C;nc|ENSG00000148541|Q8NE31-3|FAM13C;nc|ENSG00000148541|Q8NE31-4|FAM13C;nc|ENSG00000148541|Q8NE31-5|FAM13C 3.5964929083625545 0.7891324200061827 1 {I|L}{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}YE 7 6 14.325 0.0 0.0 1.2061 0.0 0.0 310.2581225692793 0.0 310.2581225692793 0.0 0.8302237567568973 0.0 0.0 0 0.0 0.0 0.0916328861051033 0.0 {I|L}{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}YE 1.2061 - 403 + 1 2.126 88811.5 1.0 4389 3525 7907 DOHH2_400M_050219_1,7916 DOHH2_400M_050219_1,7916,RLRKALREF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7917 44.433 263.0 261710.0 25 0 30314.0 + 19050 LDNKEPLL 8 88 471.2675451210513 940.5205373089026 2 471.2670776247978 MULTI CID FTMS 0 0 0 7907 145053.859375 1.0 0 0.0 10 Unmodified _LDNKEPLL_ REV__ENSG00000074755|ENST00000381638|ZZEF1;REV__ENST00000574474.1_1_17:3979912-4046255:-|nuORF;REV__nc|ENSG00000074755|O43149-3|ZZEF1 26.88365393820708 0.4786498634179528 1 {NN|[MP]|[D{I|L}]|[EV]}KN[EP]{I|L}{I|L} 8 -1 + 56.93 0.0 0.0 6.053 6.053 77.232 0.0 0.0 0.0 16.064921830680703 25.24735947860492 16.064921830680703 0.0443219174010778 0 0.3252574989159953 2.0 0.0 0.7302046884880937 {NN|[MP]|[D{I|L}]|[EV]}KN[EP]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[QP]D{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QP]KD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}KGG[EP]{I|L}{I|L};{[TV]|[{I|L}S]}[QP]RD{I|L}{I|L};{[TV]|[{I|L}S]}[VG]N[EP]{I|L}{I|L};{[TV]|[{I|L}S]}[VG][QP]D{I|L}{I|L};[KA][EP]RD{I|L}{I|L};{[TV]|[{I|L}S]}[QP][VG]D{I|L}{I|L};[KA][EP][VG]D{I|L}{I|L} 6.053;6.0483;5.541;5.0682;3.6017;3.2618;3.2571;2.7744;2.617;1.7896 -;-;-;-;-;-;-;-;-;- 196 1 2.126 56931.9 1.0 4390 3525 7907 DOHH2_400M_050219_1,7917 DOHH2_400M_050219_1,7917,LDNKEPLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7918 44.441 372.0 256130.0 25 0 25894.0 + -1 IPVPLEVS 8 143 448.2593154232584 894.5040779133168 2 448.2584106326103 MULTI CID FTMS 0 0 0 7907 129117.0390625 0.1391615548362329 2 -0.256622314453125 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))IPVPLEVS_ REV__ENSG00000147255|ENST00000361420|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-4|IGSF1 0.7936320650641473 0.8195151834710337 1 {I|L} 1 -1 11.259 0.0 0.0 1.2587 0.0 0.0 763.4089831640965 0.0 763.4089831640965 0.0 3.4636052752950874 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2587 + + 22 + 1 2.126 73389.8 1.0 4391 3525 7907 DOHH2_400M_050219_1,7918 DOHH2_400M_050219_1,7918,IPVPLEVS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7919 44.445 173.0 349270.0 25 0 35907.0 + 42195 VSEPLAPL 8 99 413.2384294750878 824.4623060169756 2 413.2379028201103 MULTI CID FTMS 0 0 0 7907 127424.1796875 0.2690405866199348 -1 0.13580322265625 12 Unmodified _VSEPLAPL_ REV__ENSG00000158828|ENST00000321556|PINK1;REV__ENST00000400490.2_1_1:20972014-20977181:+|nuORF;REV__ENST00000492302.1_1_1:20975445-20977181:+|nuORF;REV__nc|ENSG00000158828|Q9BXM7-2|PINK1 2.577480529830294 0.808687252328423 1 W 1 -1 3.4949 0.0 0.0 0.42389 0.0 0.0 411.2376488898256 224.13038049869377 635.3680293885194 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.42389 - 3 + 1 2.126 52549.9 1.0 4392 3525 7907 DOHH2_400M_050219_1,7919 DOHH2_400M_050219_1,7919,VSEPLAPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7920 44.45 268.0 269560.0 25 0 12778.0 + 9290 FIDHDITSQLY 11 98 676.3303075905524 1350.6460622479046 2 676.8310424685478 MULTI CID FTMS 0 0 0 7907 120119.0703125 0.3444017042095599 -1 0.13580322265625 13 Unmodified _FIDHDITSQLY_ ENSG00000156787|ENST00000287380|TBC1D31;ENST00000524307.5_1_8:124089445-124141439:+|nuORF;nc|ENSG00000156787|Q96DN5-2|TBC1D31;nc|ENSG00000156787|Q96DN5-3|TBC1D31 45.69961567697781 0.1414455360291008 1 [HD]D{I|L}{M(Oxidation (M))|F}{I|L}TSQ{I|L}Y 11 4 + 60.393 0.0 0.0 4.4714 4.4714 78.29 0.0 0.0 0.0 3.872735630574091 32.065407702902995 3.872735630574091 5.557197440251521 0 0.8935078169319297 0.0 1.424742501084005 0.0 [HD]D{I|L}{M(Oxidation (M))|F}{I|L}TSQ{I|L}Y;{[QS]|[NT]}[HQ]{M(Oxidation (M))|F}{I|L}TSQ{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QST{I|L}D{[MS]|[{M(Oxidation (M))|F}A]}{I|L}Y;[HD]D{I|L}{M(Oxidation (M))|F}{I|L}TS[AG]{I|L}Y;{[QS]|[NT]}[HQ]{M(Oxidation (M))|F}{I|L}TS[AG]{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[AG]ST{I|L}D{[MS]|[{M(Oxidation (M))|F}A]}{I|L}Y;[HD]D{I|L}{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))R]{I|L}Y;{[MG]|[TS]}[Y{I|L}]Y{I|L}TSQ{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QSE{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[C(Carbamidomethyl (C))R]{I|L}D{[MS]|[{M(Oxidation (M))|F}A]}{I|L}Y 4.4714;4.06;3.9741;3.7956;3.3841;3.2983;2.8778;2.6247;2.4555;2.3805 -;-;-;-;-;-;-;-;-;- 652 1 2.126 60885.7 1.0 4393 3525 7907 DOHH2_400M_050219_1,7920 DOHH2_400M_050219_1,7920,FIDHDITSQLY False True FIDHDITSQLY 44.449653 676.33 2815863.25 7907.0 ENST00000524307.5_1_8:124089445-124141439:+|nuORF;;nc|ENSG00000156787|Q96DN5-3|TBC1D31;;ENSG00000156787|ENST00000287380|TBC1D31;;nc|ENSG00000156787|Q96DN5-2|TBC1D31 7.522526105244954 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7921 44.455 321.0 219890.0 25 0 19379.0 + 5255 DKKLQFSL 8 114 489.78468239244745 977.5548118516948 2 489.7851135134697 MULTI CID FTMS 0 0 0 7907 105812.2734375 0.7600718433296875 -1 0.13580322265625 14 Unmodified _DKKLQFSL_ ENSG00000145741|ENST00000380591|BTF3;ENST00000510787.5_1_5:72794492-72798477:+|nuORF;nc|ENSG00000145741|P20290-2|BTF3 55.50274090549119 0.1141693163797808 1 {[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}Q{M(Oxidation (M))|F}S{I|L} 8 0 + 52.102 0.0 0.0 5.3298 5.3298 86.407 0.0 0.0 0.0 3.055074169904444 26.86858074702407 3.055074169904444 9.262137858390815 0 1.6989700043360187 0.0 0.75 0.4247425010840047 + + {[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}Q{M(Oxidation (M))|F}S{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}[AG]{M(Oxidation (M))|F}S{I|L};{[TV]|[{I|L}S]}[RK]Q{M(Oxidation (M))|F}S{I|L};[{M(Oxidation (M))|F}V]K[QT]RS{I|L};[{M(Oxidation (M))|F}V]KSAARS{I|L};[{M(Oxidation (M))|F}V]KTA[KT]A{I|L};{[TV]|[{I|L}S]}[RK][AG]{M(Oxidation (M))|F}S{I|L};{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KKD{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]KKD{I|L};{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KRS{I|L} 5.3298;4.3823;4.34;4.2577;3.9965;3.8575;3.3925;2.9928;2.8912;2.8884 +;-;-;-;-;-;-;-;-;- + 504 1 2.126 55793.9 1.0 4394 3525 7907 DOHH2_400M_050219_1,7921 DOHH2_400M_050219_1,7921,DKKLQFSL True True DKKLQFSL 44.45549 489.78511351347 957671.3125 7907.0 nc|ENSG00000145741|P20290-2|BTF3;;ENSG00000145741|ENST00000380591|BTF3;;ENST00000510787.5_1_5:72794492-72798477:+|nuORF 4.771426995595296 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7922 44.469 800.0 104200.0 25 0 4076.4 + -1 KRYYYYCRFRW 11 97 880.9235944019204 1759.8326358706406 2 880.9260131716728 MULTI CID FTMS 0 0 0 7907 103123.515625 1.0 0 0.0 15 Carbamidomethyl (C) _KRYYYYC(Carbamidomethyl (C))RFRW_ REV__ENSG00000105609|ENST00000449561|LILRB5;REV__nc|ENSG00000105609|O75023|LILRB5 0.0 0.8751479354844584 1 [MN]PN{I|L}NEAQ[WR]{M(Oxidation (M))|F}{I|L}Q 14 -1 + 96.627 0.0 0.0 5.4907 5.4907 84.636 0.0 0.0 0.0 22.79840696594043 12.302819856851386 12.302819856851386 9.050244867691433 0 1.579689690656103 1.5228787452803376 0.0 0.75 [MN]PN{I|L}NEAQ[WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NEA[AG][WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}GGEAQ[WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}NEAQ[WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NEAQ{I|L}{I|L}[C(Carbamidomethyl (C))C]{I|L}Q;[MN]PN{I|L}NEAQ[KQ]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}[WQ]Q[WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NEAQ[RN][PS][Y{I|L}];{[YD]|[{M(Oxidation (M))|F}M]}KYNEAQ[WR]{M(Oxidation (M))|F}{I|L}Q;{[YD]|[{M(Oxidation (M))|F}M]}QYNEAQ[WR]{M(Oxidation (M))|F}{I|L}Q 5.4907;4.9764;4.9764;4.9764;4.8311;4.7601;4.2174;3.3387;3.1487;3.1487 -;-;-;-;-;-;-;-;-;- 1033 + 1 2.126 60107.0 0.449999988079071 4395 3525 7907 DOHH2_400M_050219_1,7922 DOHH2_400M_050219_1,7922,KRYYYYCRFRW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7923 44.483 800.0 89390.0 25 0 7456.9 + 36904 TEQSQIKGYVW 11 123 669.8383361560034 1337.662119378807 2 669.8392211794853 MULTI CID FTMS 0 0 0 7907 95215.5078125 1.0 0 0.0 16 Unmodified _TEQSQIKGYVW_ ENSG00000205155|ENST00000587708|PSENEN 49.74193281347159 0.1190592179673825 1 K{I|L}{[QS]|[NT]}QMVW 8 6 41.732 0.0 0.0 3.1198 0.0 0.0 319.1545277326188 0.0 319.1545277326188 0.0 24.70251509407793 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 K{I|L}{[QS]|[NT]}QMVW 3.1198 - 355 1 2.126 55949.4 0.5 4396 3525 7907 DOHH2_400M_050219_1,7923 DOHH2_400M_050219_1,7923,TEQSQIKGYVW True True TEQSQIKGYVW 44.483186 669.839221179485 512053.90625 7907.0 ENSG00000205155|ENST00000587708|PSENEN 8.113365491231283 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7924 44.488 181.0 552110.0 25 0 85915.0 + 6579 EAMVIREL 8 105 480.7626216558116 0 480.7624694705009 PEAK CID FTMS 0 0 0 7907 99781.9921875 0.4459214619858622 -1 0.13580322265625 17 Unmodified _EAMVIREL_ ENSG00000119333|ENST00000372715|DYNC2I2 61.357469665136826 0.0276526298886688 1 MV{I|L} 3 5 21.242 0.0 0.0 2.2139 0.0 0.0 200.07595024346068 413.2158375120258 613.2917877554866 0.0 0.0 0.0 0.0 0 0.6549471895720984 0.0 0.0 0.0 + MV{I|L} 2.2139 + + 205 + 1 2.126 81533.3 1.0 4397 3525 7907 DOHH2_400M_050219_1,7924 DOHH2_400M_050219_1,7924,EAMVIREL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7925 44.502 800.0 86747.0 25 0 8357.6 + 35658 SVDEYQVGQLY 11 119 650.8061181408675 1299.597683348535 2 650.8053466677666 MULTI CID FTMS 0 0 0 7907 91794.6328125 1.0 0 0.0 18 Unmodified _SVDEYQVGQLY_ ENSG00000174238|ENST00000313486|PITPNA 19.361941925380144 0.6323962752489956 1 [VS]DE 4 7 20.45 0.0 0.0 1.5736 0.0 0.0 0.0 866.4055806476161 866.4055806476161 4.252057161061273 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3494850021680094 0.0 + [VS]DE 1.5736 + + 180 1 2.126 63387.1 0.5099999904632568 4398 3525 7907 DOHH2_400M_050219_1,7925 DOHH2_400M_050219_1,7925,SVDEYQVGQLY False True SVDEYQVGQLY 44.501696 650.805346667767 455133.53125 7907.0 ENSG00000174238|ENST00000313486|PITPNA 4.159938891728719 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7926 44.509 436.0 207450.0 25 0 22998.0 + 37178 TIDTSMFCEY 10 113 605.2439713701252 1208.4733898070504 2 605.2432739138603 MULTI CID FTMS 0 0 0 7907 94656.859375 0.6616390938158441 -1 0.13580322265625 19 Unmodified _TIDTSMFCEY_ ENSG00000135829|ENST00000367549|DHX9 14.838274106304384 0.5985701837916485 1 {[ES]|[DT]|[{I|L}C]}TD{I|L}{M(Oxidation (M))|F} 6 6 29.765 0.0 0.0 2.463 0.0 0.0 0.0 513.1473759733191 513.1473759733191 8.219264543735953 0.0 0.0 0.0 0 0.0 0.0 1.9666152729074453 0.0 {[ES]|[DT]|[{I|L}C]}TD{I|L}{M(Oxidation (M))|F} 2.463 - 518 1 2.126 67607.7 1.0 4399 3525 7907 DOHH2_400M_050219_1,7926 DOHH2_400M_050219_1,7926,TIDTSMFCEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7927 44.513 185.0 325730.0 25 0 40166.0 26007 NLVQCLLEK 9 102 530.2952709149558 0 530.2946655154228 PEAK CID FTMS 0 0 0 7907 148281.640625 0.7488030426730604 1 -0.1483001708984375 20 Unmodified _NLVQCLLEK_ ENSG00000122085|ENST00000391980|MTERF4;ENST00000475860.1_1_2:242038724-242041688:-|nuORF 6.2057823575117 0.3444685223463735 1 D{I|L} 2 8 8.5835 0.0 0.0 0.81085 0.0 0.0 226.13313108596785 601.3093355768186 827.4424666627865 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L} 0.81085 - 16 + 1 2.126 50625.8 1.0 4400 3525 7907 DOHH2_400M_050219_1,7927 DOHH2_400M_050219_1,7927,NLVQCLLEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7929 44.518 7.3 5434800.0 25 0 1744400.0 + 27333 PHSSPLALL 9 58 467.77163131226393 933.528709691328 2 467.7718688845634 MULTI CID FTMS 0 0 0 7928 6148597.5 0.3404811647709999 1 -0.1083221435546875 1 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 30.22481116460888 0.1466181017706357 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 9 4 + 40.876 0.0 0.0 4.3786 4.3786 83.849 0.0 0.0 0.0 5.642492736872597 25.39136227485692 5.642492736872597 11.23712505420023 0 0.5 0.0 1.274227503252014 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA][PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]{I|L}[PS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA]{I|L}[PS]{I|L} 4.3786;3.1749;3.0656;1.8619 -;-;-;- 76 1 2.128 37859.1 1.0 4401 3526 7928 DOHH2_400M_050219_1,7929 DOHH2_400M_050219_1,7929,PHSSPLALL False True PHSSPLALL 44.517846 467.771868884563 130603056.0 7928.0 ENST00000517495.1_1_8:41132739-41134502:-|nuORF 0.4649725755055745 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7930 44.519 14.0 2179300.0 25 0 234560.0 + 37438 TLDFHTNTLY 10 63 612.7984736152538 1223.5823942973077 2 612.7991821169853 MULTI CID FTMS 0 0 0 7928 2445414.75 0.1244100301738545 2 -0.1966934204101562 2 Unmodified _TLDFHTNTLY_ ENSG00000168702|ENST00000389484|LRP1B 24.99096001346401 0.4071966087057876 1 KW{I|L}T{I|L}Y 6 7 49.998 0.0 0.0 4.0862 0.0 0.0 401.11778456855626 0.0 401.11778456855626 0.0 34.59183145787911 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 KW{I|L}T{I|L}Y 4.0862 - 139 1 2.128 27514.3 1.0 4402 3526 7928 DOHH2_400M_050219_1,7930 DOHH2_400M_050219_1,7930,TLDFHTNTLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7931 44.52 18.0 2980200.0 25 0 775800.0 21060 LPAELTLV 8 61 428.2618807432492 854.5092085532983 2 428.2617065310478 MULTI CID FTMS 0 0 0 7928 3348804.5 0.6719923176901218 1 -0.1083221435546875 3 Unmodified _LPAELTLV_ ENST00000340553.7_1_2:48541890-48555783:+|nuORF 2.302733041254933 0.8103549651115762 1 R 1 8 6.9897 0.0 0.0 0.81798 0.0 0.0 69.47510318396083 625.9119356744749 695.3870388584357 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.81798 - 1 + 1 2.128 49576.6 1.0 4403 3526 7928 DOHH2_400M_050219_1,7931 DOHH2_400M_050219_1,7931,LPAELTLV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7932 44.521 37.0 1423800.0 25 0 345610.0 36718 TDLREKLKS 9 68 545.3163032505478 1088.6180535678957 2 545.3170654177666 MULTI CID FTMS 0 0 0 7928 1482469.5 0.4489924946293941 3 -0.3027801513671875 4 Unmodified _TDLREKLKS_ ENSG00000091542|ENST00000399138|ALKBH5;nc|ENSG00000091542|Q6P6C2-1|ALKBH5 2.059750862983233 0.8427793054688888 1 R 1 8 0.088644 0.0 0.0 0.0081428 0.0 0.0 850.4761295950424 79.01965509586171 929.495784690904 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.0081428 + + 3 + 1 2.128 47136.2 1.0 4404 3526 7928 DOHH2_400M_050219_1,7932 DOHH2_400M_050219_1,7932,TDLREKLKS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7933 44.523 52.0 1505800.0 25 0 190520.0 + 5312 DLDSRVLYY 9 74 572.2872084896657 1142.5598640461312 2 572.2878906130791 MULTI CID FTMS 0 0 0 7928 945178.0625 0.0690369813295624 -2 0.2841033935546875 5 Unmodified _DLDSRVLYY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 24.99096001346401 0.2132109383330889 1 {NN|[MP]|[D{I|L}]|[EV]}[QT]V{[QN]|[E{I|L}]|[KN]}YY 9 4 + 54.427 0.0 0.0 4.7636 4.7636 78.929 0.0 0.0 0.0 4.985287152449232 11.235899786366232 4.985287152449232 4.985287152449232 0 1.305462187404089 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[QT]V{[QN]|[E{I|L}]|[KN]}YY;[Y{I|L}][Y{M(Oxidation (M))|F}]V{I|L}YY;{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}{I|L}YY;{NN|[MP]|[D{I|L}]|[EV]}[QT]D{I|L}{I|L}YY;{[TV]|[{I|L}S]}[RV]DD{I|L}YY;[Y{I|L}][Y{M(Oxidation (M))|F}]VY{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DD{I|L}YY;{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}Y;[Y{I|L}][Y{M(Oxidation (M))|F}]YV{I|L}Y;{[TV]|[{I|L}S]}[RV]DDY{I|L}Y 4.7636;4.3273;4.2328;4.1519;3.7802;3.6262;3.5007;3.338;3.0993;3.0792 -;-;-;-;-;-;-;-;-;- 280 + 1 2.128 61369.8 1.0 4405 3526 7928 DOHH2_400M_050219_1,7933 DOHH2_400M_050219_1,7933,DLDSRVLYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7934 44.524 71.0 882190.0 25 0 182440.0 20098 LKAPLDIPVPD 11 84 589.342815811877 1176.671078690554 2 589.3431884646416 MULTI CID FTMS 0 0 0 7928 868637.375 0.7584470578425244 -1 0.1483001708984375 6 Unmodified _LKAPLDIPVPD_ ENSG00000092010|ENST00000206451|PSME1;ENST00000561142.5_1_14:24605441-24607359:+|nuORF;nc|ENSG00000092010|Q06323-2|PSME1;nc|ENSG00000092010|Q06323-3|PSME1 1.1933415558491238 0.8695176722560516 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.128 49750.9 1.0 4406 3526 7928 DOHH2_400M_050219_1,7934 DOHH2_400M_050219_1,7934,LKAPLDIPVPD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7935 44.527 96.0 805840.0 25 0 84618.0 + 44428 YMIDPSGVSY 10 98 566.2549926788929 1130.4954324245855 2 566.2551757693291 MULTI CID FTMS 0 0 0 7928 601009.625 1.0 0 0.0 7 Unmodified _YMIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 37.97399986684836 0.1789611706409123 1 [PS]GVDYM{I|L}SY 10 8 + 33.393 0.0 0.0 2.9538 2.9538 67.46 0.0 0.0 0.0 0.3109965431440997 0.3109965431440997 0.3109965431440997 0.3109965431440997 0 0.8935078169319297 0.0 0.2396518287104437 0.0 [PS]GVDYM{I|L}SY;[HM]VEMP[QP]Y;[HM]{I|L}MDP[QP]Y;{[QD]|[EN]|[WG]|[KD]|[RS]}PDYM{I|L}SY;[PS]GDVYM{I|L}SY;[PS]GVYDM{I|L}SY;[PS]GVYMEVSY;{[QD]|[EN]|[WG]|[KD]|[RS]}PYMEVSY;{[QD]|[EN]|[WG]|[KD]|[RS]}PYDM{I|L}SY;[HM]{I|L}DMP[QP]Y 2.9538;2.9263;2.9263;2.8668;2.8433;2.7981;2.7981;2.711;2.711;2.6601 -;-;-;-;-;-;-;-;-;- 580 1 2.128 67972.1 1.0 4407 3526 7928 DOHH2_400M_050219_1,7935 DOHH2_400M_050219_1,7935,YMIDPSGVSY False True YMIDPSGVSY 44.526527 566.255175769329 4283050.0 7928.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 6.249559243520101 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7936 44.529 91.0 626240.0 25 0 90720.0 + 19371 LEQRQNLV 8 83 500.2829042907332 998.5512556482664 2 500.2830993533134 MULTI CID FTMS 0 0 0 7928 487899.71875 0.6692824028884511 1 -0.1083221435546875 8 Unmodified _LEQRQNLV_ REV__ENSG00000165115|ENST00000297814|KIF27;REV__nc|ENSG00000165115|Q86VH2-2|KIF27 2.302733041254933 0.8103549651115762 1 {I|L} 1 -1 11.259 0.0 0.0 1.1275 0.0 0.0 867.4563287457258 0.0 867.4563287457258 0.0 5.774509799928715 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1275 + + 14 + 1 2.128 48735.3 1.0 4408 3526 7928 DOHH2_400M_050219_1,7936 DOHH2_400M_050219_1,7936,LEQRQNLV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7937 44.531 124.0 700480.0 25 0 44022.0 -1 0 83 857.9298357910704 1713.8451186489408 2 857.9294921755791 MULTI CID FTMS 0 0 0 7928 465974.40625 0.6879166560173362 -1 0.1483001708984375 9 1 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[QP]AN{I|L} 14 -1 104.18 0.0 0.0 6.0787 0.0 0.0 0.0 208.0730379693969 208.0730379693969 75.90874491738596 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.0 2.004432191740108 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[QP]AN{I|L} 6.0787 - 1144 + 1 2.128 61921.9 1.0 4409 3526 7928 DOHH2_400M_050219_1,7937 DOHH2_400M_050219_1,7937, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7938 44.533 114.0 664120.0 25 0 127300.0 + -1 EAMVIREL 8 92 480.7698952049407 959.5252374766816 2 481.2794372439384 MULTI CID FTMS 0 0 0 7928 459864.71875 1.0 0 0.0 10 Carbamidomethyl (C) _AEARKLC(Carbamidomethyl (C))L_ ENSG00000119333|ENST00000372715|DYNC2I2 14.581692164780916 0.6954967302934248 1 {[CP]|[EA]}MV{I|L}[PS]T{I|L} 9 -1 + 24.402 0.0 0.0 2.5432 2.5432 71.125 0.0 0.0 0.0 10.24690718274137 8.204482088348119 8.204482088348119 3.467874862246564 0 0.0 0.0 0.0 0.0 {[CP]|[EA]}MV{I|L}[PS]T{I|L};{[CP]|[EA]}MV{I|L}{[RE]|[WV]}{I|L};{[CP]|[EA]}M{I|L}V[PS]T{I|L};[QA][KC]{I|L}[PS]T{I|L};{[CP]|[EA]}M{I|L}V{[RE]|[WV]}{I|L};[QA]{I|L}[KC][PS]T{I|L};[QA][KC]{I|L}{[RE]|[WV]}{I|L};[QA]{I|L}[KC]{[RE]|[WV]}{I|L};[QA]{I|L}{[TV]|[{I|L}S]}{[QS]|[NT]}T{I|L};[QA]{I|L}{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))R]{I|L} 2.5432;2.1818;1.8147;1.5302;1.4533;1.2417;1.1688;0.88031;0.51327;0.15185 -;-;-;-;-;-;-;-;-;- 163 + 1 2.128 62554.1 1.0 4410 3526 7928 DOHH2_400M_050219_1,7938 DOHH2_400M_050219_1,7938,AEARKLCL False False EAMVIREL 44.533481 481.279437243938 1138690.0 7928.0 ENSG00000119333|ENST00000372715|DYNC2I2 0.7469131747881571 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7939 44.536 123.0 533070.0 25 0 78533.0 + 37876 TLVTFHTPK 9 86 522.2958429068678 1042.5771328805356 2 522.2961303591728 MULTI CID FTMS 0 0 0 7928 341564.625 0.2565157409095424 4 -0.4269294738769531 11 Unmodified _TLVTFHTPK_ REV__ENSG00000128591|ENST00000325888|FLNC;REV__nc|ENSG00000128591|Q14315-2|FLNC 4.3292370932331545 0.7635526921153418 1 [Q{I|L}]{M(Oxidation (M))|F} 3 -1 8.9524 0.0 0.0 0.85868 0.0 0.0 0.0 651.3219088190061 651.3219088190061 7.358631114164781 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [Q{I|L}]{M(Oxidation (M))|F} 0.85868 - 18 + 1 2.128 56647.1 1.0 4411 3526 7928 DOHH2_400M_050219_1,7939 DOHH2_400M_050219_1,7939,TLVTFHTPK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7940 44.542 338.0 241520.0 25 0 41429.0 -1 MRPLGKGLLPA 11 99 597.8564658077089 1193.6983786822177 2 597.8566161990166 MULTI CID FTMS 0 0 0 7928 266427.0 0.6796857473545342 -2 0.2841033935546875 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MRPLGKGLLPA_ nc|ENSG00000196166|Q6ZUL3-2|LINC03042;nc|ENSG00000196166|Q6ZUL3|LINC03042 2.9952420565917617 0.861016188266951 1 Y 1 -1 10.278 0.0 0.0 0.86099 0.0 0.0 1012.6246462376848 0.0 1012.6246462376848 0.0 7.178642847807186 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.86099 - 7 + 1 2.128 64610.0 1.0 4412 3526 7928 DOHH2_400M_050219_1,7940 DOHH2_400M_050219_1,7940,MRPLGKGLLPA False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 7941 44.549 377.0 249570.0 25 0 13696.0 + 41586 NEITGQIKF 9 139 524.808399966013 1047.602246998826 2 524.8089477419853 MULTI CID FTMS 0 0 0 7928 251164.015625 0.8569506550506547 1 -0.1083221435546875 13 Unmodified _VPPIFSLLY_ ENST00000510206.5_1_4:186321548-186327081:-|nuORF;ENSG00000109775|ENST00000264689|UFSP2 5.230669730166228 0.7320841359114558 1 {[QN]|[E{I|L}]|[KN]}{I|L}TRAAK{M(Oxidation (M))|F} 9 9 + 34.28 0.0 0.0 3.2722 3.2722 79.369 0.0 0.0 0.0 21.80577499866147 9.12971259689116 9.12971259689116 9.208187539523752 0 0.0 0.6020599913279624 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}TRAAK{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}T[VG]AAK{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}[SG]{I|L}AAK{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}T{[QG]|[NA]}{I|L}K{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[SG]{I|L}{I|L}AAK{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}[SG][RV]K{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}{[VA]|[{I|L}G]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}[SG]AA{I|L}K{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[SG]{I|L}[RV]K{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[SG][RV]{I|L}K{M(Oxidation (M))|F} 3.2722;2.3933;2.1815;1.9646;1.6068;0.91751;0.89075;0.87383;0.3428;0.3428 -;-;-;-;-;-;-;-;-;- 528 + 1 2.128 76213.9 1.0 4413 3526 7928 DOHH2_400M_050219_1,7941 DOHH2_400M_050219_1,7941,VPPIFSLLY False False NEITGQIKF 44.548948 524.808947741985 283973.9375 7928.0 ENST00000510206.5_1_4:186321548-186327081:-|nuORF;;ENSG00000109775|ENST00000264689|UFSP2 3.3523127237955728 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7942 44.556 370.0 213050.0 25 0 27526.0 41590 VPPKVTTT 8 114 421.7514817222712 841.4884105113424 2 421.7513000369072 MULTI CID FTMS 0 0 0 7928 241621.0625 1.0 0 0.0 14 Unmodified _VPPKVTTT_ ENSG00000113249|ENST00000523175|HAVCR1 2.577480529830294 0.808687252328423 1 {M(Oxidation (M))|F} 1 8 2.4743 0.0 0.0 0.29403 0.0 0.0 421.266003638817 270.1345308893188 691.4005345281358 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.29403 - 6 + 1 2.128 65741.1 1.0 4414 3526 7928 DOHH2_400M_050219_1,7942 DOHH2_400M_050219_1,7942,VPPKVTTT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7943 44.563 439.0 200480.0 25 0 16284.0 + 541 AEIEETYANF 10 131 593.7669454611834 1185.5193379891666 2 593.7673217654228 MULTI CID FTMS 0 0 0 7928 239797.859375 1.0 0 0.0 15 Unmodified _AEIEETYANF_ ENSG00000119787|ENST00000378954|ATL2;ENST00000477642.5_1_2:38525261-38527422:-|nuORF;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2 36.12702656103203 0.1984647928738587 1 N{M(Oxidation (M))|F} 2 8 17.747 0.0 0.0 1.497 0.0 0.0 906.3969147487354 0.0 906.3969147487354 0.0 -0.4558500074313834 -0.4558500074313834 0.0 0 0.0 0.0 0.0 0.3054621874040891 + N{M(Oxidation (M))|F} 1.497 + + 1257 + 1 2.128 68615.7 1.0 4415 3526 7928 DOHH2_400M_050219_1,7943 DOHH2_400M_050219_1,7943,AEIEETYANF False True AEIEETYANF 44.563415 593.767321765423 1546495.125 7928.0 ENST00000477642.5_1_2:38525261-38527422:-|nuORF;;nc|ENSG00000119787|Q8NHH9-2|ATL2;;ENSG00000119787|ENST00000378954|ATL2;;nc|ENSG00000119787|Q8NHH9-5|ATL2;;nc|ENSG00000119787|Q8NHH9-3|ATL2;;nc|ENSG00000119787|Q8NHH9-4|ATL2 6.5146745045979815 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7944 44.572 464.0 420130.0 25 0 38131.0 + 33114 SESRMVVTF 9 142 528.2625270149495 1054.5105010966988 2 528.2630493044853 MULTI CID FTMS 0 0 0 7928 231776.921875 0.3852188252065895 -1 0.1483001708984375 16 Unmodified _SESRMVVTF_ ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I 70.33199760932243 0.0209706178985989 1 {[MG]|[TS]}[RD]MVVT{M(Oxidation (M))|F} 9 2 + 63.52 0.0 0.0 6.0236 6.0236 77.178 0.0 0.0 0.0 0.0944714022234975 16.478174818886373 0.0944714022234975 0.0944714022234975 0 1.25 0.0 1.214559192431053 0.0 {[MG]|[TS]}[RD]MVVT{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T][NP]MVVT{M(Oxidation (M))|F};EEK{[CT]|[{M(Oxidation (M))|F}G]}VVT{M(Oxidation (M))|F};{[ET]|[MV]}[QT]MVVT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}VVT{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][WQ]VVT{M(Oxidation (M))|F};EEK[R{M(Oxidation (M))|F}]VT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{[DA]|[EG]}[R{M(Oxidation (M))|F}]VT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[WQ]VE{M(Oxidation (M))|F};{[MG]|[TS]}[TP]{[CT]|[{M(Oxidation (M))|F}G]}VVT{M(Oxidation (M))|F} 6.0236;6.0146;5.1105;4.915;4.9069;4.8046;4.4962;4.2874;4.2668;4.2455 -;-;-;-;-;-;-;-;-;- 788 1 2.128 152908.0 1.0 4416 3526 7928 DOHH2_400M_050219_1,7944 DOHH2_400M_050219_1,7944,SESRMVVTF True True SESRMVVTF 44.57164 528.263049304485 3529415.5 7928.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-5|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENSG00000263001|ENST00000573035|GTF2I 6.933644612630208 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7945 44.586 800.0 51065.0 25 0 11509.0 -1 0 34 1163.1292346355049 0 1163.460620105267 PEAK CID FTMS 0 0 0 7928 27650.662109375 1.0 0 0.0 17 1 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.30073 0.0 0.0 838.5811488590974 1335.5931932815022 2174.1743421405995 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.30073 - 3 + 1 2.128 41534.7 0.5099999904632568 4417 3526 7928 DOHH2_400M_050219_1,7945 DOHH2_400M_050219_1,7945, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7946 44.601 800.0 540210.0 25 0 30670.0 + 7727 ELDPMAMTQKY 11 179 663.8069337806697 1325.5993146281394 2 663.8071166872978 MULTI CID FTMS 0 0 0 7928 97578.6953125 0.0380861977401874 -2 0.2841033935546875 18 Unmodified _ELDPMAMTQKY_ ENSG00000087365|ENST00000322535|SF3B2;ENST00000534765.1_1_11:65835264-65836005:+|nuORF 151.47984550603806 0.0006278708120472 1 {[QN]|[E{I|L}]|[KN]}DPMAMTQKY 11 0 + 121.36 0.0 0.0 9.1554 9.1554 92.559 0.0 0.0 0.0 66.28743079281348 12.35028299170665 12.35028299170665 9.128498242811006 0 1.1641478515490356 2.0 1.363364334130467 2.079689690656103 + + {[QN]|[E{I|L}]|[KN]}DPMAMTQKY;{[QN]|[E{I|L}]|[KN]}DPMAMT[AG]KY;{[QN]|[E{I|L}]|[KN]}DPMAMTP[QP]P;{[QN]|[E{I|L}]|[KN]}DPMAMT[KA]GY;{[QN]|[E{I|L}]|[KN]}DPMAM[KA]TGY;{[QN]|[E{I|L}]|[KN]}DP[W{M(Oxidation (M))|F}]TQKY;{[QN]|[E{I|L}]|[KN]}DPT[EC]TQKY;{[QN]|[E{I|L}]|[KN]}DPMAR{[CA]|SS}TGY;{[QN]|[E{I|L}]|[KN]}DP[W{M(Oxidation (M))|F}]T[AG]KY;{[QN]|[E{I|L}]|[KN]}DPT[EC]T[AG]KY 9.1554;8.4668;7.3249;7.154;6.9727;6.6701;6.4848;6.1492;5.9787;5.7962 +;-;-;-;-;-;-;-;-;- + 12260 + 1 2.128 308787.0 0.5899999737739563 4418 3526 7928 DOHH2_400M_050219_1,7946 DOHH2_400M_050219_1,7946,ELDPMAMTQKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7947 44.614 800.0 77174.0 25 0 7996.9 40301 VGVRKRSV 8 116 450.7907507971134 899.5669486610268 2 450.7905151247978 MULTI CID FTMS 0 0 0 7928 93377.65625 0.666881514840314 1 -0.1083221435546875 19 Unmodified _VGVRKRSV_ ENSG00000100767|ENST00000644200|PAPLN;nc|ENSG00000100767|O95428-4|PAPLN;nc|ENSG00000100767|O95428-5|PAPLN;nc|ENSG00000100767|O95428-6|PAPLN 0.7936320650641473 0.8195151834710337 1 {I|L} 1 8 10.969 0.0 0.0 1.2194 0.0 0.0 768.4716402887597 0.0 768.4716402887597 0.0 2.146742364618305 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2194 - 9 + 1 2.128 53861.8 0.4300000071525574 4419 3526 7928 DOHH2_400M_050219_1,7947 DOHH2_400M_050219_1,7947,VGVRKRSV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7948 44.621 320.0 264360.0 25 0 18936.0 20787 LLVLHQLDSI 10 133 575.8430402078582 1149.6715274825162 2 575.8433715701103 MULTI CID FTMS 0 0 0 7928 92380.0078125 0.0825231443097458 -5 0.6394729614257812 20 Unmodified _LLVLHQLDSI_ ENSG00000196712|ENST00000358273|NF1;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-5|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.H1962Pfs*2|1|0.23|ENSG00000196712|chr17:31334908-31334909|-/C|frameshift_variant 3.5964929083625545 0.7100006075494749 1 YW 2 10 17.959 0.0 0.0 1.5621 0.0 0.0 782.5185038871949 0.0 782.5185038871949 0.0 4.859856381998782 0.0 0.0 0 0.0 0.0 0.0 0.0 YW 1.5621 - 113 + 1 2.128 68163.9 1.0 4420 3526 7928 DOHH2_400M_050219_1,7948 DOHH2_400M_050219_1,7948,LLVLHQLDSI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7950 44.626 85.0 506690.0 25 0 107740.0 + 34303 SLRKRGGV 8 63 436.7748483389031 0 436.7748901247978 PEAK CID FTMS 0 0 0 7949 528953.875 0.2819922705256062 2 -0.1944580078125 1 Unmodified _SLRKRGGV_ REV__ENST00000534751.2_1_11:45235120-45235297:+|nuORF 0.7936320650641473 0.5979579398327216 1 Q 1 -1 2.4743 0.0 0.0 0.2839 0.0 0.0 471.2895820764406 269.15473352603755 740.4443156024781 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.2839 - 1 + 1 2.128 37609.9 1.0 4421 3527 7949 DOHH2_400M_050219_1,7950 DOHH2_400M_050219_1,7950,SLRKRGGV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7951 44.629 115.0 455440.0 25 0 51256.0 + 9505 FLDDSIPNGVKY 12 79 684.346069505017 1366.677586076834 2 684.3458740115166 MULTI CID FTMS 0 0 0 7949 319325.875 0.5931801880310563 2 -0.1944580078125 2 Unmodified _FLDRALYWHF_ ENSG00000189233|ENST00000413272|NUGGC 12.240655878213236 0.6421556946785427 1 {I|L}SDD{I|L}E 6 8 56.899 0.0 0.0 4.1633 0.0 0.0 676.3554453270319 0.0 676.3554453270319 0.0 47.69077524932108 0.0 0.0 0 1.274227503252014 0.0 0.0 0.0 {I|L}SDD{I|L}E 4.1633 - 53 1 2.128 44370.7 1.0 4422 3527 7949 DOHH2_400M_050219_1,7951 DOHH2_400M_050219_1,7951,FLDRALYWHF False False FLDDSIPNGVKY 44.628585 684.345874011517 12607194.0 7949.0 ENSG00000189233|ENST00000413272|NUGGC 7.828248500823975 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7952 44.63 70.0 900660.0 25 0 96502.0 + 31946 RVDPIGPLSY 10 75 558.8061101709811 1115.5976674087622 2 558.8063842654228 MULTI CID FTMS 0 0 0 7949 783981.75 1.0 0 0.0 3 Unmodified _RVDPIGPLSY_ ENSG00000104093|ENST00000560891|DMXL2;nc|ENSG00000104093|Q8TDJ6-2|DMXL2;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;nc|ENSG00000104093|Q8TDJ6|DMXL2 53.31671820480216 0.0606844387689228 1 [{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GP{I|L}SY 10 3 + 70.507 0.0 0.0 6.3201 6.3201 92.246 0.0 0.0 0.0 0.3144843586539707 41.22318517861992 0.3144843586539707 17.219161359540145 0 1.805462187404089 1.3010299956639813 0.4247425010840047 0.0 [{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GP{I|L}SY;[{I|L}P]G[NP]G[KA]{I|L}SY;[{I|L}P]S[HT][KA]{I|L}SY;[PG]{I|L}[NP]G[KA]{I|L}SY;[{I|L}P]G[NP][KQ]{I|L}SY;[PG]{I|L}[NP][KQ]{I|L}SY;[HM]{I|L}[KA]G[KQ]{[CT]|[{M(Oxidation (M))|F}G]};[HM]{I|L}[KQ][KQ]{[CT]|[{M(Oxidation (M))|F}G]} 6.3201;4.7766;4.6393;4.6078;4.1666;3.9978;2.4595;1.5796 -;-;-;-;-;-;-;- 183 1 2.128 53765.6 1.0 4423 3527 7949 DOHH2_400M_050219_1,7952 DOHH2_400M_050219_1,7952,RVDPIGPLSY True True RVDPIGPLSY 44.630245 558.806384265423 5843761.5 7949.0 ENSG00000104093|ENST00000560891|DMXL2;;nc|ENSG00000104093|Q8TDJ6-2|DMXL2;;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;;nc|ENSG00000104093|Q8TDJ6|DMXL2 7.455639839172363 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7953 44.632 97.0 526680.0 25 0 43228.0 + 1432 ALDSHILDY 9 83 523.7618210171934 1045.5090891011866 2 523.7617065310478 MULTI CID FTMS 0 0 0 7949 316594.96875 1.0 0 0.0 4 Unmodified _ALDSHILDY_ ENSG00000134077|ENST00000452837|THUMPD3 39.957323273325 0.0756908302845263 1 VD{I|L}RDY 6 5 41.252 0.0 0.0 3.9457 0.0 0.0 266.1393514076304 0.0 266.1393514076304 0.0 30.01500514161256 0.0 0.0 0 0.5 0.0 0.2887254899964357 0.0 VD{I|L}RDY 3.9457 - 304 + 1 2.128 43839.4 1.0 4424 3527 7949 DOHH2_400M_050219_1,7953 DOHH2_400M_050219_1,7953,ALDSHILDY True True ALDSHILDY 44.632351 523.761706531048 3294831.75 7949.0 ENSG00000134077|ENST00000452837|THUMPD3 5.371307214101155 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7954 44.637 259.0 223830.0 25 0 11954.0 9488 FLDGRPLTL 9 102 516.2961052951372 1030.5776576570745 2 516.2967407107353 MULTI CID FTMS 0 0 0 7949 252032.40625 0.6614276750403109 2 -0.1944580078125 5 Unmodified _FLDGRPLTL_ ENSG00000152348|ENST00000282185|ATG10;ENST00000514253.2_1_5:81460277-81572080:+|nuORF 7.910154910731844 0.6385446671287552 1 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}DK 5 7 13.952 0.0 0.0 1.3538 0.0 0.0 0.0 412.25583826236567 412.25583826236567 3.4678748622465605 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}DK 1.3538 - 80 + 1 2.128 49589.1 1.0 4425 3527 7949 DOHH2_400M_050219_1,7954 DOHH2_400M_050219_1,7954,FLDGRPLTL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7955 44.642 257.0 372560.0 25 0 28566.0 -1 0 108 722.689722245763 2165.047337337489 3 723.0244018435478 MULTI CID FTMS 0 0 0 7949 218953.96875 0.1249590872701699 -2 0.256622314453125 6 1 {[SA]|[TG]}GY[HK]QAGMTG 12 -1 72.151 0.0 0.0 3.3326 0.0 0.0 0.0 973.49069461558 973.49069461558 47.59881272697172 0.0 0.0 0.0 0 2.5 0.0 1.661954370472159 0.0 {[SA]|[TG]}GY[HK]QAGMTG 3.3326 - 5069 1 2.128 74521.1 1.0 4426 3527 7949 DOHH2_400M_050219_1,7955 DOHH2_400M_050219_1,7955, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7956 44.647 303.0 336700.0 25 0 24379.0 + 505 AEGVIVGHW 9 117 484.253178774137 966.491804615074 2 484.2539550662041 MULTI CID FTMS 0 0 0 7949 207865.828125 1.0 0 0.0 7 Unmodified _AEGVIVGHW_ ENSG00000137642|ENST00000260197|SORL1 56.541270873467816 0.0279970378729908 1 {[CP]|[EA]}GV{I|L}VGHW 9 0 + 58.663 0.0 0.0 6.0697 6.0697 84.755 0.0 0.0 0.0 41.55024486769143 7.375729675490547 7.375729675490547 6.478174818886373 0 1.25 0.0 0.0 0.0 + + {[CP]|[EA]}GV{I|L}VGHW;{[CP]|[EA]}GV{I|L}RHW;{[CP]|[EA]}R{I|L}VGHW;{[CP]|[EA]}GV{I|L}V[EP][PG];{[CP]|[EA]}R{I|L}RHW;{[CP]|[EA]}R{I|L}V[EP][PG];{[CP]|[EA]}GV[HM]V[KP];{[CP]|[EA]}GV{M(Oxidation (M))|F}[YK][PG];{[CP]|[EA]}GV{M(Oxidation (M))|F}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};{[CP]|[EA]}G{I|L}{I|L}AAHW 6.0697;5.3994;5.1936;4.7244;4.5304;3.8426;2.7695;2.6522;2.5141;2.4218 +;-;-;-;-;-;-;-;-;- + 612 + 1 2.128 83608.5 1.0 4427 3527 7949 DOHH2_400M_050219_1,7956 DOHH2_400M_050219_1,7956,AEGVIVGHW True True AEGVIVGHW 44.647466 484.253955066204 1186869.875 7949.0 ENSG00000137642|ENST00000260197|SORL1 10.747391064961752 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7957 44.661 800.0 299580.0 25 0 17235.0 -1 0 146 771.7013596120587 2312.082249436376 3 772.0359374880791 MULTI CID FTMS 0 0 0 7949 197826.109375 0.4174186719297804 -1 0.1083221435546875 8 1 [MT]GR{I|L}VVGYGTMGA 14 -1 88.344 0.0 0.0 3.821 0.0 0.0 0.0 915.377880041029 915.377880041029 50.1594886157732 0.0 0.0 0.0 0 2.9604093769761874 0.8860566476931632 0.7742275032520141 0.5796896906561032 [MT]GR{I|L}VVGYGTMGA 3.821 - 23856 1 2.128 167756.5 0.8299999833106995 4428 3527 7949 DOHH2_400M_050219_1,7957 DOHH2_400M_050219_1,7957, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7958 44.668 364.0 318230.0 25 0 14976.0 + -1 RSEAPNWATQDSGFY 15 142 864.8855043545254 1727.7564557758508 2 865.3862792849541 MULTI CID FTMS 0 0 0 7949 162392.4375 0.9123442138947078 -1 0.1083221435546875 9 ENST00000433978.1_1_6:74002913-74002997:+|nuORF;ENSG00000104408|ENST00000220849|EIF3E 1 {[QV]|[N{I|L}]|[RA]|[KV]}PNESWATQT{[SA]|[TG]}{M(Oxidation (M))|F}Y 15 -1 + 79.892 0.0 0.0 4.624 4.624 72.698 0.0 0.0 0.0 7.7815125038364386 3.0700988014767177 3.0700988014767177 0.4845500650402812 0 0.6677353201839438 2.0 0.0 0.6382104921644451 {[QV]|[N{I|L}]|[RA]|[KV]}PNESWATQT{[SA]|[TG]}{M(Oxidation (M))|F}Y;{[QV]|[N{I|L}]|[RA]|[KV]}PNESWATQD[SG]{M(Oxidation (M))|F}Y;{[QV]|[N{I|L}]|[RA]|[KV]}PNESWATTQ{[SA]|[TG]}{M(Oxidation (M))|F}Y;{[QV]|[N{I|L}]|[RA]|[KV]}PNESWATQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}Y;[NP]{I|L}NESWATQT{[SA]|[TG]}{M(Oxidation (M))|F}Y;[NP]{I|L}NESWATQD[SG]{M(Oxidation (M))|F}Y;{[QV]|[N{I|L}]|[RA]|[KV]}PNESWAT[AG]T{[SA]|[TG]}{M(Oxidation (M))|F}Y;{[QV]|[N{I|L}]|[RA]|[KV]}PGGESWATQT{[SA]|[TG]}{M(Oxidation (M))|F}Y;{[QV]|[N{I|L}]|[RA]|[KV]}PNES{[DA]|[EG]}ATQT{[SA]|[TG]}{M(Oxidation (M))|F}Y;{[QV]|[N{I|L}]|[RA]|[KV]}PNESWAT[AG]D[SG]{M(Oxidation (M))|F}Y 4.624;4.596;4.4498;4.2088;4.1737;4.1456;4.1013;4.1013;4.1013;4.0733 -;-;-;-;-;-;-;-;-;- 20402 1 2.128 79321.1 1.0 4429 3527 7949 DOHH2_400M_050219_1,7958 DOHH2_400M_050219_1,7958, False False RSEAPNWATQDSGFY 44.667872 864.8853 1903298.5 7949.0 ENST00000433978.1_1_6:74002913-74002997:+|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 7.708371480305989 2.0 False 15.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7959 44.675 390.0 200970.0 25 0 14309.0 + 6555 EALPETEIL 9 135 507.7720060879509 0 507.7719299197197 PEAK CID FTMS 0 0 0 7949 101694.4609375 0.1305145124289117 2 -0.1944580078125 10 Unmodified _EALPETEIL_ REV__ENSG00000196090|ENST00000373187|PTPRT;REV__nc|ENSG00000196090|O14522-1|PTPRT 11.640296217721598 0.2934555500198502 1 P 1 -1 6.9897 0.0 0.0 0.68964 0.0 0.0 313.16318545125984 600.2911471002561 913.454332551516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.68964 + + 63 + 1 2.128 66044.8 1.0 4430 3527 7949 DOHH2_400M_050219_1,7959 DOHH2_400M_050219_1,7959,EALPETEIL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7960 44.687 692.0 131080.0 25 0 10374.0 + 21535 LPIVKTEF 8 134 473.7837200337593 945.5528871343188 2 473.7838928103447 MULTI CID FTMS 0 0 0 7949 98788.8828125 1.0 0 0.0 11 Unmodified _LPIVKTEF_ ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23 24.020572477871973 0.5389365498350341 1 {I|L}P{I|L}VK 5 3 56.917 0.0 0.0 6.0194 0.0 0.0 0.0 392.1461275690063 392.1461275690063 39.08069651734926 0.0 0.0 0.0 0 0.4978499570595206 2.0 0.0 0.0 + {I|L}P{I|L}VK 6.0194 + + 251 + 1 2.128 70893.9 1.0 4431 3527 7949 DOHH2_400M_050219_1,7960 DOHH2_400M_050219_1,7960,LPIVKTEF False True LPIVKTEF 44.686854 473.783892810345 534330.625 7949.0 nc|ENSG00000112282|Q9ULK4-4|MED23;;nc|ENSG00000112282|Q9ULK4-5|MED23;;nc|ENSG00000112282|Q9ULK4-3|MED23;;ENSG00000112282|ENST00000368068|MED23 1.1506851414839427 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7961 44.692 181.0 470530.0 25 0 91355.0 27203 PGKELKVLSY 10 99 567.3300135817798 1132.6454742303597 2 567.8315917849541 MULTI CID FTMS 0 0 0 7949 188853.59375 0.0996085914401402 -5 0.6314048767089844 12 Unmodified _PGKELKVLSY_ ENSG00000164308|ENST00000437043|ERAP2;nc|ENSG00000164308|Q6P179-2|ERAP2;nc|ENSG00000164308|Q6P179-3|ERAP2;nc|ENSG00000164308|Q6P179-4|ERAP2 3.5964929083625545 0.7100006075494749 1 Y 1 9 11.99 0.0 0.0 1.0586 0.0 0.0 951.5713603161 0.0 951.5713603161 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.0586 + + 24 + 1 2.128 71094.9 1.0 4432 3527 7949 DOHH2_400M_050219_1,7961 DOHH2_400M_050219_1,7961,PGKELKVLSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7962 44.696 236.0 350860.0 25 0 39274.0 + 20219 LLCQTEEEW 9 123 575.7556210940986 1149.4966892549971 2 576.2586547732353 MULTI CID FTMS 0 0 0 7949 118206.359375 1.0 0 0.0 13 Unmodified _LLCQTEEEW_ ENSG00000099954|ENST00000262608|CECR2;nc|ENSG00000099954|Q9BXF3-2|CECR2;nc|ENSG00000099954|Q9BXF3|CECR2 5.230669730166228 0.7320841359114558 1 YW 2 8 17.959 0.0 0.0 1.5623 0.0 0.0 782.3425776135573 0.0 782.3425776135573 0.0 6.538816891614747 0.0 0.0 0 0.0 0.0 0.0 0.0 YW 1.5623 - 170 + 1 2.128 66726.5 1.0 4433 3527 7949 DOHH2_400M_050219_1,7962 DOHH2_400M_050219_1,7962,LLCQTEEEW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7963 44.71 800.0 165830.0 25 0 85452.0 + 31947 RVDPIGPLSY 10 31 1116.6040635825702 1115.5967871159703 1 1116.603564441204 MULTI CID FTMS 0 0 0 7949 92721.4140625 1.0 0 0.0 14 Unmodified _RVDPIGPLSY_ ENSG00000104093|ENST00000560891|DMXL2;nc|ENSG00000104093|Q8TDJ6-2|DMXL2;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;nc|ENSG00000104093|Q8TDJ6|DMXL2 4.897010918128616 0.7039849508293987 1 P 1 9 10.485 0.0 0.0 0.93982 0.0 0.0 370.196287703664 645.3213088868243 1015.5175965904884 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + P 0.93982 + + 2 + 1 2.128 89263.0 0.4699999988079071 4434 3527 7949 DOHH2_400M_050219_1,7963 DOHH2_400M_050219_1,7963,RVDPIGPLSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7965 44.717 157.0 399230.0 25 0 64319.0 + + 33085 SEVMREVAW 9 100 553.8305196573351 1105.64648638147 2 553.8303100466728 MULTI CID FTMS 0 0 0 7964 293783.5625 0.2806478738456391 4 -0.3642005920410156 1 Unmodified _SERRKFKR_ ENSG00000039123|ENST00000230640|MTREX 2.577480529830294 0.808687252328423 1 W 1 -1 12.764 0.0 0.0 1.1545 0.0 0.0 901.5561676332264 0.0 901.5561676332264 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1545 - 24 + 1 2.123 53439.3 1.0 4435 3528 7964 DOHH2_400M_050219_1,7965 DOHH2_400M_050219_1,7965,SERRKFKR False False SEVMREVAW 44.716739 553.830310046673 1422785.125 7964.0 ENSG00000039123|ENST00000230640|MTREX 5.208016395568848 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7966 44.72 150.0 686860.0 25 0 312940.0 + 10931 GAKRHSGL 8 72 413.2384294750878 824.4623060169756 2 413.2379943728447 MULTI CID FTMS 0 0 0 7964 95108.484375 0.2008099443256061 2 -0.2302360534667968 2 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 2.577480529830294 0.808687252328423 1 K 1 -1 1.1092 0.0 0.0 0.13454 0.0 0.0 638.3237389777163 55.019704686926175 693.3434436646425 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.13454 + + 7 + 1 2.123 87870.5 1.0 4436 3528 7964 DOHH2_400M_050219_1,7966 DOHH2_400M_050219_1,7966,GAKRHSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7967 44.721 53.0 1007700.0 25 0 222870.0 27204 PGKELKVLSY 10 69 567.3300135817798 1132.6454742303597 2 567.3304931521416 MULTI CID FTMS 0 0 0 7964 918128.0 0.2693450539792127 -3 0.3449935913085937 3 Unmodified _PGKELKVLSY_ ENSG00000164308|ENST00000437043|ERAP2;nc|ENSG00000164308|Q6P179-2|ERAP2;nc|ENSG00000164308|Q6P179-3|ERAP2;nc|ENSG00000164308|Q6P179-4|ERAP2 3.5964929083625545 0.7100006075494749 1 Y 1 9 11.109 0.0 0.0 0.98082 0.0 0.0 951.5714213512564 0.0 951.5714213512564 0.0 8.634993639681312 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.98082 + + 5 + 1 2.123 46417.1 1.0 4437 3528 7964 DOHH2_400M_050219_1,7967 DOHH2_400M_050219_1,7967,PGKELKVLSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7968 44.728 369.0 291510.0 25 0 29244.0 + 777 AESEDLAVHLY 11 109 623.8013035121286 1245.588054091057 2 623.8018676638603 MULTI CID FTMS 0 0 0 7964 275333.34375 1.0 0 0.0 4 Unmodified _AESEDLAVHLY_ ENSG00000116191|ENST00000367635|RALGPS2;ENST00000478871.1_1_1:178863027-178885491:+|nuORF;ENST00000480743.1_1_1:178855116-178863183:+|nuORF;nc|ENSG00000116191|Q86X27-3|RALGPS2 92.4914307365334 0.0005733640855005 1 {[CP]|[EA]}SED{I|L}AVH{I|L}Y 11 0 + 68.464 0.0 0.0 5.4965 5.4965 88.552 0.0 0.0 0.0 5.125608947723464 10.070623213458042 5.125608947723464 13.721266007494611 0 1.3026048219588937 0.0 0.4247425010840047 0.0 + + {[CP]|[EA]}SED{I|L}AVH{I|L}Y;[H{I|L}]G{I|L}D{I|L}C{I|L}Y{[CP]|[EA]};[H{I|L}]G{I|L}{I|L}DC{I|L}Y{[CP]|[EA]};[H{I|L}]VAD{I|L}C{I|L}Y{[CP]|[EA]};[H{I|L}]G{I|L}D{I|L}ESY{[CP]|[EA]};[H{I|L}]VA{I|L}DC{I|L}Y{[CP]|[EA]};[H{I|L}]G{I|L}{I|L}DESY{[CP]|[EA]};{[CP]|[EA]}SE{[QN]|[E{I|L}]|[KN]}GVH{I|L}Y;[HV]A{I|L}D{I|L}C{I|L}Y{[CP]|[EA]};{[CP]|[EA]}SE[W{I|L}]VH{I|L}Y 5.4965;4.3949;4.2535;4.0118;3.8921;3.8705;3.7507;3.7128;3.6458;3.5223 +;-;-;-;-;-;-;-;-;- + 984 + 1 2.123 84902.3 1.0 4438 3528 7964 DOHH2_400M_050219_1,7968 DOHH2_400M_050219_1,7968,AESEDLAVHLY True True AESEDLAVHLY 44.727755 623.80186766386 1559797.5 7964.0 ENSG00000116191|ENST00000367635|RALGPS2;;ENST00000478871.1_1_1:178863027-178885491:+|nuORF;;nc|ENSG00000116191|Q86X27-3|RALGPS2;;ENST00000480743.1_1_1:178855116-178863183:+|nuORF 8.604987462361654 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7969 44.732 220.0 436730.0 25 0 41218.0 + 25559 NEVDPGDWQKF 11 105 667.8044314470119 1333.5943099608237 2 667.8047363162041 MULTI CID FTMS 0 0 0 7964 250432.6875 0.4449091016694016 -1 0.0883712768554687 5 Unmodified _NEVDPGDWQKF_ ENSG00000142207|ENST00000382751|URB1 77.04852534044906 0.0119778990295177 1 {[QD]|[EN]|[WG]|[KD]|[RS]}VDPGDWQK{M(Oxidation (M))|F} 11 0 + 65.341 0.0 0.0 4.8996 4.8996 80.152 0.0 0.0 0.0 47.25421309446472 8.380555403872265 8.380555403872265 5.945995062651647 0 1.3494850021680094 0.0 0.3494850021680094 0.6861818737241735 + + {[QD]|[EN]|[WG]|[KD]|[RS]}VDPGDWQK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VDPGDADQK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VDPGDW[AG]K{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VDPGDAD[AG]K{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VDP[VP][YE]{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QD]|[EN]|[WG]|[KD]|[RS]}VD[RH][YE]{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QD]|[EN]|[WG]|[KD]|[RS]}VDPG[HK][YE]{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}V{[HG]|PP}[CS]WQK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[KC]HDWQK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}V{[HG]|PP}VD[YE]{[WS]|[C(Carbamidomethyl (C)){I|L}]} 4.8996;4.4538;4.2151;3.7715;2.4898;2.2822;2.2737;2.0278;1.6839;1.5143 +;-;-;-;-;-;-;-;-;- + 1113 + 1 2.123 74825.2 1.0 4439 3528 7964 DOHH2_400M_050219_1,7969 DOHH2_400M_050219_1,7969,NEVDPGDWQKF True True NEVDPGDWQKF 44.731911 667.804736316204 3179003.0 7964.0 ENSG00000142207|ENST00000382751|URB1 9.527027130126951 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7970 44.736 227.0 463140.0 25 0 49141.0 + 9603 FLLDKKIGV 9 100 516.8264617123104 1031.6383704914208 2 516.8267089724541 MULTI CID FTMS 0 0 0 7964 231759.1875 1.0 0 0.0 6 Unmodified _FLLDKKIGV_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 43.77239144664712 0.0547478964384323 1 {M(Oxidation (M))|F}{I|L}{I|L}DKK{I|L}GV 9 0 + 57.349 0.0 0.0 5.5591 5.5591 81.683 0.0 0.0 0.0 9.375554513600278 8.28131590713106 8.28131590713106 4.827796776480469 0 1.0924778212679485 0.0 0.6861818737241735 0.0 + + {M(Oxidation (M))|F}{I|L}{I|L}DKK{I|L}GV;{M(Oxidation (M))|F}{I|L}VEKK{I|L}GV;{NN|[MP]|[D{I|L}]|[EV]}KK{I|L}{M(Oxidation (M))|F}{I|L}R;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}K{M(Oxidation (M))|F}{I|L}R;KK{I|L}[R{M(Oxidation (M))|F}][KG]R 5.5591;5.0911;3.9122;3.3286;0.10851 +;-;-;-;- + 726 + 1 2.123 81995.1 1.0 4440 3528 7964 DOHH2_400M_050219_1,7970 DOHH2_400M_050219_1,7970,FLLDKKIGV True True FLLDKKIGV 44.736201 516.826708972454 1393077.25 7964.0 nc|ENSG00000166226|P78371-2|CCT2;;ENSG00000166226|ENST00000299300|CCT2 4.275580108165741 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7971 44.75 800.0 235170.0 25 0 30542.0 + + -1 TTEIDNNIEQISSY 14 151 813.8795680120656 1625.7445830909312 2 813.8787719607353 MULTI CID FTMS 0 0 0 7964 226941.53125 1.0 0 0.0 7 Carbamidomethyl (C),Oxidation (M) _RNYYM(Oxidation (M))C(Carbamidomethyl (C))YEKRK_ ENSG00000186395|ENST00000269576|KRT10;P13645 2.735195868890462 0.8622431031272658 1 {I|L}QE{I|L}NN[YK]SY 10 -1 90.398 0.0 0.0 5.5604 0.0 0.0 355.1357279343113 0.0 355.1357279343113 0.0 28.41924147073115 0.0 0.0 0 1.075257498915995 0.0 2.0400990676322905 1.6549471895720984 {I|L}QE{I|L}NN[YK]SY 5.5604 - 42635 + 1 2.123 130984.6 0.8600000143051147 4441 3528 7964 DOHH2_400M_050219_1,7971 DOHH2_400M_050219_1,7971,RNYYMCYEKRK False False TTEIDNNIEQISSY 44.750049 813.878771960735 1602149.75 7964.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 8.808670043945312 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7972 44.764 800.0 608020.0 25 0 221570.0 -1 0 84 1084.032336093131 0 1084.030810534954 PEAK CID FTMS 0 0 0 7964 202538.59375 0.7386857864729551 -1 0.0883712768554687 8 1 T 1 -1 9.6041 0.0 0.0 0.44339 0.0 0.0 1334.6732404462248 727.2987764947874 2061.972016941012 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 T 0.44339 - 109 + 1 2.123 305594.7 0.7699999809265137 4442 3528 7964 DOHH2_400M_050219_1,7972 DOHH2_400M_050219_1,7972, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7973 44.768 237.0 347050.0 25 0 15774.0 -1 RRHRRCRRRCC 11 115 864.9386316043615 1727.8627102755229 2 865.4396850466728 MULTI CID FTMS 0 0 0 7964 199384.984375 0.6719876187741832 -1 0.0883712768554687 9 3 Carbamidomethyl (C) _RRHRRC(Carbamidomethyl (C))RRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENSG00000184560|ENST00000333870|SPEM2 0.3070304955306653 0.8736993455979228 1 {[QV]|[N{I|L}]|[RA]|[KV]}PNES[HA]AEN{I|L}DP 14 -1 88.402 0.0 0.0 5.1162 0.0 0.0 0.0 223.10594143546572 223.10594143546572 64.62368696417565 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.3494850021680094 0.7742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}PNES[HA]AEN{I|L}DP 5.1162 - 2728 1 2.123 59009.1 1.0 4443 3528 7964 DOHH2_400M_050219_1,7973 DOHH2_400M_050219_1,7973,RRHRRCRRRCC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7974 44.776 454.0 375620.0 25 0 16409.0 + 25969 NLPPHIIRL 9 162 358.2254054873107 1071.6543870621322 3 358.2250549197197 MULTI CID FTMS 0 0 0 7964 204239.03125 0.1754258976887846 15 -1.3985481262207031 10 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 8.97624648632007 0.6013279508813512 1 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}R{I|L} 9 0 + 49.754 0.0 0.0 4.6427 4.6427 76.215 0.0 0.0 0.0 36.98949267689607 2.6170358435846595 2.6170358435846595 3.0102999566398125 0 0.2215141619232908 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PP{I|L}H{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PH{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}{M(Oxidation (M))|F}S{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}A{M(Oxidation (M))|F}{I|L}{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PPH{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}P{M(Oxidation (M))|F}S{I|L}R{I|L} 4.6427;4.3618;4.0809;4.0809;3.9166;3.8;3.8 +;-;-;-;-;-;- + 147 + 1 2.123 140045.4 1.0 4444 3528 7964 DOHH2_400M_050219_1,7974 DOHH2_400M_050219_1,7974,NLPPHIIRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7975 44.781 203.0 235500.0 25 0 29161.0 + 20977 LNMDHTVVL 9 93 521.2731874339515 1040.531821934703 2 521.2732421755791 MULTI CID FTMS 0 0 0 7964 186847.34375 1.0 0 0.0 11 Unmodified _LNMDHTVVL_ ENSG00000159210|ENST00000502492|SNF8;ENST00000504000.1_1_17:47010518-47010644:-|nuORF;ENST00000509989.5_1_17:47007839-47014253:-|nuORF;ENST00000514089.5_1_17:47007839-47013524:-|nuORF;nc|ENSG00000159210|Q96H20-2|SNF8 41.8396318013385 0.0653578398400075 1 TVV{I|L} 4 5 43.532 0.0 0.0 4.1836 0.0 0.0 610.2527943341812 0.0 610.2527943341812 0.0 38.047444008242906 0.0 0.0 0 0.8807196863200843 0.0 0.8807196863200843 0.0 + TVV{I|L} 4.1836 + + 86 1 2.123 45690.0 1.0 4445 3528 7964 DOHH2_400M_050219_1,7975 DOHH2_400M_050219_1,7975,LNMDHTVVL True True LNMDHTVVL 44.781488 521.273242175579 798269.375 7964.0 ENST00000509989.5_1_17:47007839-47014253:-|nuORF;;nc|ENSG00000159210|Q96H20-2|SNF8;;ENST00000504000.1_1_17:47010518-47010644:-|nuORF;;ENST00000514089.5_1_17:47007839-47013524:-|nuORF;;ENSG00000159210|ENST00000502492|SNF8 5.020420074462891 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7976 44.791 517.0 220330.0 25 0 21683.0 + -1 DLISRDYSL 9 122 541.2798942685989 540.2726178019989 1 541.2798339724541 MULTI CID FTMS 0 0 0 7964 153888.953125 1.0 0 0.0 12 nc|ENSG00000155229|Q96T76-7|MMS19;ENSG00000155229|ENST00000438925|MMS19;nc|ENSG00000155229|Q96T76-5|MMS19;nc|ENSG00000155229|Q96T76-8|MMS19 1 {[TV]|[{I|L}S]}{M(Oxidation (M))|F} 3 -1 22.225 0.0 0.0 4.1137 0.0 0.0 0.0 190.09007484515027 190.09007484515027 -0.9623417880116848 0.0 -0.9623417880116848 0.0 0 0.0 0.744727494896694 0.4320395983658752 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F} 4.1137 - 155 1 2.123 90469.3 1.0 4446 3528 7964 DOHH2_400M_050219_1,7976 DOHH2_400M_050219_1,7976, False False DLISRDYSL 44.790599 541.279833972454 826901.4375 7964.0 nc|ENSG00000155229|Q96T76-7|MMS19;;ENSG00000155229|ENST00000438925|MMS19;;nc|ENSG00000155229|Q96T76-5|MMS19;;nc|ENSG00000155229|Q96T76-8|MMS19 5.431975682576497 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7977 44.802 653.0 134790.0 25 0 7716.5 + 8469 ESVKKPPYK 9 144 538.3089033351041 1074.603253737008 2 538.3082153201103 MULTI CID FTMS 0 0 0 7964 117038.8359375 0.1048760814697403 6 -0.4977684020996094 13 Unmodified _ESVKKPPYK_ REV__ENSG00000147251|ENST00000276202|DOCK11 11.640296217721598 0.521594087909532 1 W 1 -1 14.604 0.0 0.0 1.359 0.0 0.0 870.5127366245066 0.0 870.5127366245066 0.0 4.225490200071285 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.359 - 170 + 1 2.123 69779.2 1.0 4447 3528 7964 DOHH2_400M_050219_1,7977 DOHH2_400M_050219_1,7977,ESVKKPPYK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7978 44.816 800.0 159760.0 25 0 8973.8 39695 VEFYAVVPSI 10 165 562.3043253790044 1122.5940978248086 2 562.3055297732353 MULTI CID FTMS 0 0 0 7964 109712.5546875 1.0 0 0.0 14 Unmodified _VEFYAVVPSI_ ENSG00000058804|ENST00000371429|NDC1;nc|ENSG00000058804|Q9BTX1-3|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1 32.30548876998284 0.2428506522065767 1 [VP]TVREY{M(Oxidation (M))|F}{I|L} 9 8 + 38.452 0.0 0.0 3.4253 3.4253 72.393 0.0 0.0 0.0 3.0102999566398125 14.092568545288067 3.0102999566398125 3.0102999566398125 0 0.3054621874040891 0.0 1.798455006504028 0.2887254899964357 [VP]TVREY{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}PVREY{M(Oxidation (M))|F}{I|L};[{I|L}V][PS]REY{M(Oxidation (M))|F}{I|L};[VP]TV[VG]EY{M(Oxidation (M))|F}{I|L};[{I|L}V][WY]{M(Oxidation (M))|F}V[PS]{I|L};{[TV]|[{I|L}S]}PV[VG]EY{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}[{I|L}T]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V[PS]{I|L};{[QN]|[E{I|L}]|[KN]}K{[YD]|[{M(Oxidation (M))|F}M]}[VP]{M(Oxidation (M))|F}{I|L};[{I|L}V][WY]D{I|L}{[DS]|[MA]|[CV]|TT}{I|L};{[TV]|[{I|L}S]}[{I|L}T]{M(Oxidation (M))|F}D{I|L}{[DS]|[MA]|[CV]|TT}{I|L} 3.4253;3.1571;2.5497;2.3478;2.2411;2.0797;1.8714;1.8478;1.7008;1.6703 -;-;-;-;-;-;-;-;-;- 735 1 2.123 99787.5 0.5199999809265137 4448 3528 7964 DOHH2_400M_050219_1,7978 DOHH2_400M_050219_1,7978,VEFYAVVPSI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7980 44.821 6.8 8649900.0 25 0 1153500.0 + 5313 DLDSRVLYY 9 62 572.2872084896657 1142.5598640461312 2 572.2885009646416 MULTI CID FTMS 0 0 0 7979 6734704.0 0.491911157013475 1 -0.1241493225097656 1 Unmodified _DLDSRVLYY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 24.99096001346401 0.2132109383330889 1 {NN|[MP]|[D{I|L}]|[EV]}[QT]V{[QN]|[E{I|L}]|[KN]}YY 9 4 + 54.427 0.0 0.0 4.7636 4.7636 77.784 0.0 0.0 0.0 8.903018563800984 8.903018563800984 8.903018563800984 3.8464343345171415 0 1.305462187404089 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[QT]V{[QN]|[E{I|L}]|[KN]}YY;{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}{I|L}YY;{NN|[MP]|[D{I|L}]|[EV]}[QT]D{I|L}{I|L}YY;{[TV]|[{I|L}S]}[RV]DD{I|L}YY;{[TV]|[{I|L}S]}[RV]DY{NN|[MP]|[D{I|L}]|[EV]}Y;{[TV]|[{I|L}S]}[RV]YD{NN|[MP]|[D{I|L}]|[EV]}Y 4.7636;4.427;4.346;3.9844;1.7516;1.6422 -;-;-;-;-;- 139 + 1 2.123 49487.8 1.0 4449 3529 7979 DOHH2_400M_050219_1,7980 DOHH2_400M_050219_1,7980,DLDSRVLYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7981 44.822 75.0 861930.0 25 0 173040.0 + 5472 DLRRLNRF 8 91 545.3163032505478 1088.6180535678957 2 545.3170043826103 MULTI CID FTMS 0 0 0 7979 628714.3125 0.1904174133623521 6 -0.4846649169921875 2 Unmodified _DLRRLNRF_ REV__ENST00000589503.1_1_19:41938138-41938741:-|nuORF 5.230669730166228 0.792582437072536 1 {[TV]|[{I|L}S]}VD 4 -1 13.231 0.0 0.0 1.2154 0.0 0.0 0.0 671.3838671267423 671.3838671267423 7.3902384238195395 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 {[TV]|[{I|L}S]}VD 1.2154 - 35 1 2.123 53844.5 1.0 4450 3529 7979 DOHH2_400M_050219_1,7981 DOHH2_400M_050219_1,7981,DLRRLNRF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7982 44.824 65.0 717890.0 25 0 160860.0 + -1 WQLTMKKKV 9 65 589.342815811877 1176.671078690554 2 589.3432494997978 MULTI CID FTMS 0 0 0 7979 867828.5 0.7577407920501823 2 -0.225341796875 3 Oxidation (M) _WQLTM(Oxidation (M))KKKV_ REV__ENST00000466094.5_1_7:107220736-107227893:+|nuORF;REV__ENST00000486326.5_1_7:107220736-107234551:+|nuORF 0.6014990680409731 0.8936861360942873 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.123 42847.1 1.0 4451 3529 7979 DOHH2_400M_050219_1,7982 DOHH2_400M_050219_1,7982,WQLTMKKKV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7983 44.826 95.0 592580.0 25 0 40732.0 -1 0 66 857.9298357910704 1713.8451186489408 2 857.9299804568291 MULTI CID FTMS 0 0 0 7979 498014.90625 0.7352179526582897 2 -0.225341796875 4 1 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 15 -1 + 114.13 0.0 0.0 6.6596 6.6596 86.851 0.0 0.0 0.0 25.024976919629083 13.278324880759484 13.278324880759484 6.690067809585756 0 1.7302046884880935 2.0 0.0 1.6989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 6.6596;6.2692 -;- 719 + 1 2.123 43062.3 1.0 4452 3529 7979 DOHH2_400M_050219_1,7983 DOHH2_400M_050219_1,7983, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7984 44.829 120.0 573950.0 25 0 48991.0 + 38056 TPFIRPVM 8 100 480.7698952049407 959.5252374766816 2 480.7704040408134 MULTI CID FTMS 0 0 0 7979 442667.5 0.5971628130935906 1 -0.1241493225097656 5 Unmodified _TPFIRPVM_ ENSG00000205339|ENST00000379719|IPO7;ENST00000451446.1_1_13:24697062-24697869:-|nuORF 32.30548876998284 0.3644845974844379 1 TP{M(Oxidation (M))|F}{I|L}RE{M(Oxidation (M))|F} 7 2 71.318 0.0 0.0 7.4326 0.0 0.0 0.0 66.03574548892811 66.03574548892811 57.82328870566076 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3054621874040891 0.0 TP{M(Oxidation (M))|F}{I|L}RE{M(Oxidation (M))|F} 7.4326 - 400 + 1 2.123 58774.5 1.0 4453 3529 7979 DOHH2_400M_050219_1,7984 DOHH2_400M_050219_1,7984,TPFIRPVM False True TPFIRPVM 44.82853 480.770404040813 4786231.0 7979.0 ENST00000451446.1_1_13:24697062-24697869:-|nuORF;;ENSG00000205339|ENST00000379719|IPO7 6.942723910013835 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7985 44.832 180.0 462540.0 25 0 84387.0 30737 RGPASLVR 8 93 428.2618807432492 854.5092085532983 2 428.2617675662041 MULTI CID FTMS 0 0 0 7979 374663.09375 0.0751822689924162 4 -0.3029212951660156 6 Unmodified _RGPASLVR_ ENST00000497343.5_1_3:160473400-160474084:+|nuORF 0.6903765706972694 0.8201419426409876 1 {I|L} 1 7 9.3323 0.0 0.0 1.0921 0.0 0.0 723.414342685914 0.0 723.414342685914 0.0 9.33230545814891 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0921 + + 3 + 1 2.123 69851.0 1.0 4454 3529 7979 DOHH2_400M_050219_1,7985 DOHH2_400M_050219_1,7985,RGPASLVR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7986 44.835 140.0 431840.0 25 0 90008.0 + 27334 PHSSPLALL 9 86 467.77163131226393 933.528709691328 2 467.7720519900322 MULTI CID FTMS 0 0 0 7979 311003.3125 0.0172219388385138 4 -0.3029212951660156 7 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 30.22481116460888 0.1466181017706357 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 9 4 + 39.912 0.0 0.0 4.2754 4.2754 83.792 0.0 0.0 0.0 5.6424927368726046 27.43764654750096 5.6424927368726046 12.557809497117848 0 0.9247425010840048 0.0 1.2302046884880935 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};[VP][TA]H[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[R{M(Oxidation (M))|F}][{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[TV]|[{I|L}S]}[PA]H[PS]{I|L}{I|L};[TA][VP]H[PS]{I|L}{I|L};{[TV]|[{I|L}S]}{[WT]|[RM]}{[DS]|[MA]|[CV]|TT}{I|L}{I|L} 4.2754;2.9302;2.9072;2.7186;2.6077;2.4512;2.1585 -;-;-;-;-;-;- 147 1 2.123 50643.4 1.0 4455 3529 7979 DOHH2_400M_050219_1,7986 DOHH2_400M_050219_1,7986,PHSSPLALL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7987 44.837 104.0 551630.0 25 0 93870.0 + 19949 LIDVGTGYY 9 86 500.7529274893565 999.4913020455132 2 500.7530090212822 MULTI CID FTMS 0 0 0 7979 277591.0625 0.3176318075702587 -1 0.1060867309570312 8 Unmodified _LIDVGTGYY_ ENSG00000123349|ENST00000334478|PFDN5;ENST00000548984.1_1_12:53691573-53691735:+|nuORF;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;ENST00000553171.1_1_12:53691669-53691972:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5 13.50788311687929 0.4710407108020397 1 {I|L}{I|L}D 3 6 19.666 0.0 0.0 1.9676 0.0 0.0 0.0 655.2722523231099 655.2722523231099 1.7069622716897506 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + {I|L}{I|L}D 1.9676 + + 61 1 2.123 50264.4 1.0 4456 3529 7979 DOHH2_400M_050219_1,7987 DOHH2_400M_050219_1,7987,LIDVGTGYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7988 44.841 195.0 261230.0 25 0 16141.0 + -1 TLDPYRNEVSQLY 13 76 799.3964338536285 1596.778314774057 2 799.3970214724541 MULTI CID FTMS 0 0 0 7979 259584.984375 1.0 0 0.0 9 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))YRQRFLYSLY_ ENSG00000023516|ENST00000025301|AKAP11 5.731851221503515 0.8481046878870278 1 [{I|L}T][HA]SV[CS]{I|L} 9 -1 50.123 0.0 0.0 3.139 0.0 0.0 0.0 682.3164156549436 682.3164156549436 28.92544976785331 0.0 0.0 0.0 0 1.1237125054200234 2.0 0.4247425010840047 0.0 [{I|L}T][HA]SV[CS]{I|L} 3.139 - 247 + 1 2.123 39135.7 1.0 4457 3529 7979 DOHH2_400M_050219_1,7988 DOHH2_400M_050219_1,7988,MYRQRFLYSLY False False TLDPYRNEVSQLY 44.840809 799.397021472454 1515410.75 7979.0 ENSG00000023516|ENST00000025301|AKAP11 8.53956158955892 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7989 44.847 343.0 223420.0 25 0 36394.0 -1 QIKKVMIYR 9 110 597.8564658077089 1193.6983786822177 2 597.8563720583916 MULTI CID FTMS 0 0 0 7979 262025.96875 0.6684582133047311 1 -0.1241493225097656 10 Oxidation (M) _QIKKVM(Oxidation (M))IYR_ CHD5|p.N1140I|1|0.17|ENSG00000116254|chr1:6129038-6129038|T/A|missense_variant 1.844237919475145 0.850302753031785 1 Y 1 -1 11.594 0.0 0.0 0.97125 0.0 0.0 1012.6237001927632 0.0 1012.6237001927632 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.97125 + + 11 + 1 2.123 63501.5 1.0 4458 3529 7979 DOHH2_400M_050219_1,7989 DOHH2_400M_050219_1,7989,QIKKVMIYR False False False False variant PXD020620_cell_line DOHH2_400M_050219_1 7990 44.856 483.0 256080.0 25 0 21594.0 + 23343 LTDDGNKWLY 10 147 612.7984736152538 1223.5823942973077 2 612.7989379763603 MULTI CID FTMS 0 0 0 7979 232087.6875 0.0118074188457623 5 -0.3916816711425781 11 Unmodified _LTDDGNKWLY_ ENSG00000175166|ENST00000310118|PSMD2;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2 59.36838082759317 0.0382430275470746 1 {[QN]|[E{I|L}]|[KN]}GDDW{I|L}T{I|L}Y 10 6 + 93.444 0.0 0.0 7.637 7.637 84.195 0.0 0.0 0.0 20.62907763662095 15.026975159433531 15.026975159433531 2.3721186938815464 0 1.0 1.5228787452803376 0.9731975075880328 1.879854553292708 {[QN]|[E{I|L}]|[KN]}GDDW{I|L}T{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDDWT{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}GWDD{I|L}T{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDWD{I|L}T{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDD{[DA]|[EG]}{I|L}T{I|L}Y;{[QN]|[E{I|L}]|[KN]}GWDDT{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDWDT{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDD{[DA]|[EG]}T{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDDT{I|L}GE{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDDTGE{I|L}{I|L}Y 7.637;7.4431;6.9099;6.8999;6.888;6.7161;6.706;6.6941;6.5924;6.5122 -;-;-;-;-;-;-;-;-;- 3227 1 2.123 93009.9 1.0 4459 3529 7979 DOHH2_400M_050219_1,7990 DOHH2_400M_050219_1,7990,LTDDGNKWLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7991 44.862 329.0 239120.0 25 0 28238.0 + 32719 SEAPEAPLL 9 121 463.74634020815006 925.4781274831 2 463.7452575564384 MULTI CID FTMS 0 0 0 7979 149124.671875 1.0 0 0.0 12 Unmodified _SEAPEAPLL_ ENSG00000170684|ENST00000303809|ZNF296 50.855029805455786 0.0384952370514206 1 [EP]ASEA 6 5 32.862 0.0 0.0 3.5508 0.0 0.0 0.0 338.2104142022204 338.2104142022204 13.680794814686774 0.0 0.0 0.0 0 0.6643943297944485 0.8538719643217619 0.850576203518622 0.0 [EP]ASEA 3.5508 - 203 1 2.123 63866.5 1.0 4460 3529 7979 DOHH2_400M_050219_1,7991 DOHH2_400M_050219_1,7991,SEAPEAPLL True True SEAPEAPLL 44.861544 463.745257556438 1048258.9375 7979.0 ENSG00000170684|ENST00000303809|ZNF296 6.232794125874837 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7992 44.871 527.0 137090.0 25 0 11615.0 + 23533 TENIIAANHW 10 112 584.3565734711049 1166.6985940090096 2 584.3567382693291 MULTI CID FTMS 0 0 0 7979 110716.75 1.0 0 0.0 13 Unmodified _LTLGLVLLYY_ nc|ENSG00000071539|Q15645-2|TRIP13;ENST00000512024.5_1_5:893053-908577:+|nuORF;ENSG00000071539|ENST00000166345|TRIP13 4.3292370932331545 0.7066112369704343 1 {I|L}YY 3 7 15.361 0.0 0.0 1.3166 0.0 0.0 709.4807728193597 0.0 709.4807728193597 0.0 4.523845472674239 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}YY 1.3166 + + 128 + 1 2.123 59900.8 1.0 4461 3529 7979 DOHH2_400M_050219_1,7992 DOHH2_400M_050219_1,7992,LTLGLVLLYY False False TENIIAANHW 44.870821 584.356738269329 162955.875 7979.0 nc|ENSG00000071539|Q15645-2|TRIP13;;ENST00000512024.5_1_5:893053-908577:+|nuORF;;ENSG00000071539|ENST00000166345|TRIP13 6.008967399597168 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7993 44.885 800.0 221310.0 25 0 21128.0 + 39732 VEKIRGHT 8 178 470.2732192244263 938.5318855156528 2 470.7765075564384 MULTI CID FTMS 0 0 0 7979 93313.8359375 0.4462800008220043 -4 0.451080322265625 14 Unmodified _VEKIRGHT_ REV__ENSG00000145934|ENST00000518659|TENM2;REV__nc|ENSG00000145934|Q9NT68-2|TENM2 20.453626601364224 0.6087503291685402 1 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}NK 6 -1 32.113 0.0 0.0 3.4217 0.0 0.0 0.0 224.08032086390577 224.08032086390577 -1.5181682625844033 0.0 -1.5181682625844033 0.0 0 0.5 2.0 0.5387254899964358 0.0 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}NK 3.4217 - 423 1 2.123 136516.9 0.4399999976158142 4462 3529 7979 DOHH2_400M_050219_1,7993 DOHH2_400M_050219_1,7993,VEKIRGHT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 7994 44.888 82.0 518140.0 25 0 29658.0 + + 14166 SETPRINVF 9 74 531.283839091636 1060.5531252500718 2 531.7834960818291 MULTI CID FTMS 0 0 0 7979 442473.59375 1.0 0 0.0 15 Unmodified _IDDKAQPKF_ ENSG00000176715|ENST00000614302|ACSF3 7.289230182591677 0.6602208344931196 1 {NN|[MP]|[D{I|L}]|[EV]}DMV 5 -1 21.911 0.0 0.0 2.066 0.0 0.0 0.0 484.2899569147094 484.2899569147094 7.931825014007217 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}DMV 2.066 - 53 + 1 2.123 41351.0 1.0 4463 3529 7979 DOHH2_400M_050219_1,7994 DOHH2_400M_050219_1,7994,IDDKAQPKF False False SETPRINVF 44.887675 531.783496081829 2898360.0 7979.0 ENSG00000176715|ENST00000614302|ACSF3 3.8307832876841226 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 7995 44.902 800.0 196400.0 25 0 39738.0 30937 RKKFRRRW 8 160 616.8823552399001 1231.7501575466 2 616.8828002810478 MULTI CID FTMS 0 0 0 7979 162317.203125 0.8305408392712591 -2 0.1944580078125 16 Unmodified _RKKFRRRW_ ENSG00000106484|ENST00000223215|MEST;nc|ENSG00000106484|Q5EB52-2|MEST;nc|ENSG00000106484|Q5EB52-3|MEST 2.577480529830294 0.808687252328423 1 AEWQTRW 7 6 41.221 0.0 0.0 3.3465 0.0 0.0 256.2925902632001 0.0 256.2925902632001 0.0 14.90519946801209 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.25 AEWQTRW 3.3465 - 704 + 1 2.123 118821.3 0.6499999761581421 4464 3529 7979 DOHH2_400M_050219_1,7995 DOHH2_400M_050219_1,7995,RKKFRRRW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 7996 44.915 800.0 62449.0 25 0 2445.5 -1 0 106 917.4596869818176 1832.904821030435 2 917.4597656130792 MULTI CID FTMS 0 0 0 7979 145866.109375 1.0 0 0.0 17 1 [KS]E{I|L}TTE{I|L}[DN]N{I|L}ETVQ 16 -1 + 65.378 0.0 0.0 3.5669 3.5669 51.874 0.0 0.0 0.0 0.7918124604762511 1.2062907165159231 0.7918124604762511 0.0 0 0.3737125054200235 0.0 1.3851518780601924 0.4247425010840047 [KS]E{I|L}TTE{I|L}[DN]N{I|L}ETVQ;[KS]E{I|L}TTE{I|L}[QT]N{I|L}ETVQ;[KS]E{I|L}TTEQ[{I|L}T]N{I|L}ETVQ;[KS]E{I|L}TTEQ[DV]N{I|L}ETVQ;{[ES]|[DT]|[{I|L}C]}K{I|L}TTE{I|L}[QT]N{I|L}ETVQ;{[ES]|[DT]|[{I|L}C]}K{I|L}TTE{I|L}[DN]N{I|L}ETVQ;[KS]E{I|L}TTE{I|L}[DN]N{I|L}EE[QA];[KS]E{I|L}TTE{I|L}[QT]N{I|L}EE[KA];{[ES]|[DT]|[{I|L}C]}K{I|L}TTEQ[DV]N{I|L}ETVQ;{[ES]|[DT]|[{I|L}C]}K{I|L}TTEQ[{I|L}T]N{I|L}ETVQ 3.5669;3.5669;3.5405;3.5405;3.5237;3.5237;3.5011;3.5011;3.4973;3.4973 -;-;-;-;-;-;-;-;-;- 2583 1 2.123 36680.9 0.6100000143051147 4465 3529 7979 DOHH2_400M_050219_1,7996 DOHH2_400M_050219_1,7996, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 7997 44.926 546.0 193180.0 25 0 7749.9 -1 LPQAQCPEL 9 148 528.2625270149495 1054.5105010966988 2 528.2629272341728 MULTI CID FTMS 0 0 0 7979 137462.953125 0.2284667381198518 2 -0.225341796875 18 Carbamidomethyl (C) _LPQAQC(Carbamidomethyl (C))PEL_ ENST00000496336.1_1_7:65540843-65547929:+|nuORF 13.50788311687929 0.4710407108020397 1 E{I|L}P{I|L}[{I|L}P]E{I|L} 8 -1 31.375 0.0 0.0 2.9753 0.0 0.0 131.98656169276904 0.0 131.98656169276904 0.0 6.765997036641593 0.0 0.0 0 0.0 0.0 0.5 0.0 E{I|L}P{I|L}[{I|L}P]E{I|L} 2.9753 - 794 + 1 2.123 86787.1 1.0 4466 3529 7979 DOHH2_400M_050219_1,7997 DOHH2_400M_050219_1,7997,LPQAQCPEL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 7998 44.94 800.0 83141.0 25 0 7873.9 -1 0 93 959.1135481789956 2874.318815137187 3 959.7750732302666 MULTI CID FTMS 0 0 0 7979 124765.515625 0.0678541426804682 7 -0.5030746459960938 19 1 [NP]{I|L}DY 5 -1 23.015 0.0 0.0 0.80072 0.0 0.0 0.0 2269.0290460348074 2269.0290460348074 15.568109453757655 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [NP]{I|L}DY 0.80072 - 263 1 2.123 50608.2 0.5099999904632568 4467 3529 7979 DOHH2_400M_050219_1,7998 DOHH2_400M_050219_1,7998, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8000 44.945 68.0 662740.0 25 0 49706.0 + 7728 ELDPMAMTQKY 11 73 663.8069337806697 1325.5993146281394 2 663.8074218630791 MULTI CID FTMS 0 0 0 7999 508709.09375 0.1985555871058269 2 -0.1339645385742187 1 Unmodified _ELDPMAMTQKY_ ENSG00000087365|ENST00000322535|SF3B2;ENST00000534765.1_1_11:65835264-65836005:+|nuORF 27.088373467376528 0.4561593585727911 1 {[QN]|[E{I|L}]|[KN]}DPMAMTQKY 11 0 + 78.979 0.0 0.0 5.958 5.958 86.637 0.0 0.0 0.0 56.58347058973099 11.006056430243746 11.006056430243746 9.128498242811006 0 0.2396518287104437 2.0 0.0 0.0 + + {[QN]|[E{I|L}]|[KN]}DPMAMTQKY;{[QN]|[E{I|L}]|[KN]}DPMAMT[AG]KY;{[QN]|[E{I|L}]|[KN]}DP[W{M(Oxidation (M))|F}]TQKY;{[QN]|[E{I|L}]|[KN]}DPMAM[KA]{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}DP[W{M(Oxidation (M))|F}]T[AG]KY;{NN|[MP]|[D{I|L}]|[EV]}AN[KQ]AMPD[HS];{NN|[MP]|[D{I|L}]|[EV]}AGG[KQ]AMPD[HS] 5.958;5.2694;4.2745;4.082;3.5832;2.3338;1.6474 +;-;-;-;-;-;- + 315 + 1 2.123 40534.9 1.0 4468 3530 7999 DOHH2_400M_050219_1,8000 DOHH2_400M_050219_1,8000,ELDPMAMTQKY False True ELDPMAMTQKY 44.945114 663.807421863079 37563280.0 7999.0 ENST00000534765.1_1_11:65835264-65836005:+|nuORF;;ENSG00000087365|ENST00000322535|SF3B2 9.455774943033854 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8001 44.948 117.0 362370.0 25 0 34009.0 -1 0 54 722.689722245763 2165.047337337489 3 723.0243408083916 MULTI CID FTMS 0 0 0 7999 469873.3125 0.2681611144014093 1 -0.1011924743652343 2 1 TGYGM 5 -1 37.206 0.0 0.0 1.7185 0.0 0.0 1030.46223843067 622.3683397666033 1652.830578197273 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 TGYGM 1.7185 - 62 + 1 2.123 38783.3 1.0 4469 3530 7999 DOHH2_400M_050219_1,8001 DOHH2_400M_050219_1,8001, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8002 44.949 56.0 467710.0 25 0 41011.0 12002 GPKLYRGLLC 10 57 560.3214488402992 1118.6283447473984 2 560.3225585818291 MULTI CID FTMS 0 0 0 7999 1074677.625 1.0 0 0.0 3 Unmodified _GPKLYRGLLC_ ENST00000586417.5_1_19:10662751-10662972:+|nuORF 1.4819007175156935 0.719781833666733 1 Y 1 9 13.099 0.0 0.0 1.171 0.0 0.0 937.5537883282562 0.0 937.5537883282562 0.0 13.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.171 + + 1 + 1 2.123 29781.5 1.0 4470 3530 7999 DOHH2_400M_050219_1,8002 DOHH2_400M_050219_1,8002,GPKLYRGLLC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8003 44.95 56.0 865150.0 25 0 103810.0 + 45240 YRTDMIQAL 9 56 555.7841804317935 1109.553807930387 2 555.7844726443291 MULTI CID FTMS 0 0 0 7999 831430.375 0.7969134629508443 -1 0.1241493225097656 4 Unmodified _YRTDMIQAL_ ENSG00000174231|ENST00000304992|PRPF8;ENST00000572445.1_1_17:1564285-1564453:-|nuORF;ENST00000573681.1_1_17:1563133-1564615:-|nuORF 15.248480904072842 0.4239247793462406 1 [AG]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}M{I|L}QA{I|L} 10 5 + 52.4 0.0 0.0 4.7227 4.7227 82.507 0.0 0.0 0.0 8.204482088348115 35.12346576000997 8.204482088348115 9.164539485499256 0 0.9247425010840048 1.5228787452803376 0.0 0.0 [AG]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}M{I|L}QA{I|L};[AG]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}M{I|L}[AG]A{I|L};[Q{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}M{I|L}QA{I|L};[Q{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}M{I|L}[AG]A{I|L};[AG]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MRR{I|L};[Q{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MRR{I|L} 4.7227;3.8967;3.7944;2.9645;2.2647;1.3413 -;-;-;-;-;- 74 1 2.123 42869.7 1.0 4471 3530 7999 DOHH2_400M_050219_1,8003 DOHH2_400M_050219_1,8003,YRTDMIQAL False True YRTDMIQAL 44.950437 555.784472644329 6101736.0 7999.0 ENST00000573681.1_1_17:1563133-1564615:-|nuORF;;ENST00000572445.1_1_17:1564285-1564453:-|nuORF;;ENSG00000174231|ENST00000304992|PRPF8 7.245619297027588 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8004 44.952 64.0 1053300.0 25 0 227850.0 + 9454 FLDDFESKY 9 70 582.266269555388 1162.517986177576 2 582.2665893435478 MULTI CID FTMS 0 0 0 7999 774416.75 0.5795146127559117 -1 0.1241493225097656 5 Unmodified _FLDDFESKY_ ENSG00000171475|ENST00000323571|WIPF2;ENST00000494757.5_1_17:38375603-38434474:+|nuORF;nc|ENSG00000171475|Q8TF74-2|WIPF2 45.739877483867886 0.0497104363764649 1 {M(Oxidation (M))|F}{I|L}DD{M(Oxidation (M))|F}ESKY 9 0 + 79.735 0.0 0.0 6.8588 6.8588 95.586 0.0 0.0 0.0 64.50617864944853 13.46787486224656 13.46787486224656 50.00798727761634 0 1.110924374808178 0.0 0.7302046884880937 0.0 + + {M(Oxidation (M))|F}{I|L}DD{M(Oxidation (M))|F}ESKY;{[{M(Oxidation (M))|F}D]|MM}{I|L}{M(Oxidation (M))|F}[HQ]D{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[HQ]D{I|L}E;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K][HQ]D{I|L}E 6.8588;2.5571;2.4239;1.7098 +;-;-;- + 289 + 1 2.123 57442.1 1.0 4472 3530 7999 DOHH2_400M_050219_1,8004 DOHH2_400M_050219_1,8004,FLDDFESKY True True FLDDFESKY 44.951995 582.266589343548 15132309.0 7999.0 ENSG00000171475|ENST00000323571|WIPF2;;nc|ENSG00000171475|Q8TF74-2|WIPF2;;ENST00000494757.5_1_17:38375603-38434474:+|nuORF 9.417706648508709 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8005 44.954 70.0 833760.0 25 0 156110.0 + 30184 QVVDHRLKR 9 91 575.8430402078582 1149.6715274825162 2 575.8433715701103 MULTI CID FTMS 0 0 0 7999 762925.0 0.6815215906919833 -1 0.1241493225097656 6 Unmodified _QVVDHRLKR_ REV__ENSG00000120800|ENST00000261637|UTP20 0.5247636613948944 0.8963649302248013 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.123 53017.1 1.0 4473 3530 7999 DOHH2_400M_050219_1,8005 DOHH2_400M_050219_1,8005,QVVDHRLKR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8006 44.956 92.0 623920.0 25 0 47196.0 + 29991 QTDQMVFNAY 10 91 608.7688263894628 1215.5230998457257 2 608.7693969607353 MULTI CID FTMS 0 0 0 7999 575814.8125 1.0 0 0.0 7 Unmodified _QTDQMVFNAY_ ENSG00000147457|ENST00000397677|CHMP7;ENST00000517325.5_1_8:23104188-23118109:+|nuORF;ENST00000523091.5_1_8:23112705-23118098:+|nuORF 47.74868867922204 0.0933642699623533 1 {[QD]|[EN]|[WG]|[KD]|[RS]}TQMV 6 6 39.913 0.0 0.0 3.2836 0.0 0.0 0.0 510.1995097441416 510.1995097441416 17.940928640144538 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 1.325257498915995 {[QD]|[EN]|[WG]|[KD]|[RS]}TQMV 3.2836 - 432 1 2.123 49279.9 1.0 4474 3530 7999 DOHH2_400M_050219_1,8006 DOHH2_400M_050219_1,8006,QTDQMVFNAY True True QTDQMVFNAY 44.955695 608.769396960735 8162585.5 7999.0 ENST00000523091.5_1_8:23112705-23118098:+|nuORF;;ENSG00000147457|ENST00000397677|CHMP7;;ENST00000517325.5_1_8:23104188-23118109:+|nuORF 5.259903430938721 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8007 44.959 143.0 525960.0 25 0 96658.0 13745 HRLRQRGLW 9 74 611.3554792353585 1220.696405537517 2 611.3560058474541 MULTI CID FTMS 0 0 0 7999 392889.0 0.300316826306014 -8 0.95001220703125 8 Unmodified _HRLRQRGLW_ ENST00000528797.5_1_11:57413095-57413371:-|nuORF 2.302733041254933 0.8342969208511092 1 W 1 8 11.42 0.0 0.0 0.93553 0.0 0.0 1016.6064072238436 0.0 1016.6064072238436 0.0 11.419983281826005 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 0.93553 + + 9 + 1 2.123 66385.7 1.0 4475 3530 7999 DOHH2_400M_050219_1,8007 DOHH2_400M_050219_1,8007,HRLRQRGLW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8008 44.961 120.0 531410.0 25 0 37036.0 + 30321 RADQELLMY 9 91 569.7813981706796 1137.5482434081591 2 569.7818481326103 MULTI CID FTMS 0 0 0 7999 260245.921875 1.0 0 0.0 9 Unmodified _RADQELLMY_ ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000172354|P62879-2|GNB2 18.373094154950223 0.3393451798331396 1 NE{I|L}{I|L}MY 6 4 49.641 0.0 0.0 4.3639 0.0 0.0 356.1736073649414 0.0 356.1736073649414 0.0 38.672137691284405 0.0 0.0 0 1.0 0.0 0.0 0.0 NE{I|L}{I|L}MY 4.3639 - 82 1 2.123 53580.8 1.0 4476 3530 7999 DOHH2_400M_050219_1,8008 DOHH2_400M_050219_1,8008,RADQELLMY False True RADQELLMY 44.961072 569.78184813261 1787087.5 7999.0 ENSG00000172354|ENST00000303210|GNB2;;nc|ENSG00000172354|P62879-2|GNB2 5.939818382263184 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8009 44.965 191.0 391760.0 25 0 33503.0 + 13803 HTDVGLLEY 9 102 523.7618210171934 1045.5090891011866 2 523.7617675662041 MULTI CID FTMS 0 0 0 7999 241932.390625 0.7641700421842221 3 -0.17877197265625 10 Unmodified _HTDVGLLEY_ ENSG00000196498|ENST00000405201|NCOR2;ENST00000542565.1_1_12:124970985-124979836:-|nuORF;nc|ENSG00000196498|Q9Y618-4|NCOR2;nc|ENSG00000196498|Q9Y618-5|NCOR2 37.97399986684836 0.0865783450051559 1 [HT]DVG{I|L}{I|L}EY 9 0 + 58.465 0.0 0.0 5.592 5.592 80.761 0.0 0.0 0.0 2.922152515121219 48.28426828339758 2.922152515121219 3.821457414888058 0 0.4247425010840047 0.0 0.805462187404089 0.0 + + [HT]DVG{I|L}{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}[HS]G{I|L}{I|L}EY;[HT]DR{I|L}{I|L}EY;{[TV]|[{I|L}S]}[HD]G{I|L}{I|L}EY;[HT]DVA{I|L}VEY;{NN|[MP]|[D{I|L}]|[EV]}[HS]A{I|L}VEY;[YE]RR{I|L}{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}[HD]A{I|L}VEY;{[QV]|[N{I|L}]|[RA]|[KV]}V[Y{M(Oxidation (M))|F}]VEY;[HS]RRG[RD]Y 5.592;5.2265;4.9724;3.9821;3.8108;3.4453;2.4354;2.2009;1.3966;1.327 +;-;-;-;-;-;-;-;-;- + 197 1 2.123 61093.3 1.0 4477 3530 7999 DOHH2_400M_050219_1,8009 DOHH2_400M_050219_1,8009,HTDVGLLEY True True HTDVGLLEY 44.96475 523.761767566204 3294831.75 7999.0 nc|ENSG00000196498|Q9Y618-4|NCOR2;;ENSG00000196498|ENST00000405201|NCOR2;;nc|ENSG00000196498|Q9Y618-5|NCOR2;;ENST00000542565.1_1_12:124970985-124979836:-|nuORF 7.333548386891683 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8010 44.969 241.0 374910.0 25 0 59297.0 + 43572 YADNQVMHFY 10 101 644.2768113120886 1286.5390696909772 2 644.2765380740166 MULTI CID FTMS 0 0 0 7999 205497.421875 0.6637077505505482 -1 0.1241493225097656 11 Unmodified _YADNQVMHFY_ ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF 71.92227651296345 0.0188747003512554 1 YADNVQMH{M(Oxidation (M))|F}Y 10 2 + 98.275 0.0 0.0 7.6387 7.6387 87.239 0.0 0.0 0.0 66.7865374516137 13.037275116073346 13.037275116073346 4.771212547196626 0 1.1643943297944483 2.0 0.0 0.8494850021680094 YADNVQMH{M(Oxidation (M))|F}Y;YADNQVMH{M(Oxidation (M))|F}Y;YADAAAQMH{M(Oxidation (M))|F}Y;YADGGVQMH{M(Oxidation (M))|F}Y;YADNV[AG]MH{M(Oxidation (M))|F}Y;YADGGQVMH{M(Oxidation (M))|F}Y;YADNVQ[DN]VSY;YADNVD{[HG]|PP}S{M(Oxidation (M))|F}Y;YADNVD{[HG]|PP}{M(Oxidation (M))|F}SY;YADN[AG]VMH{M(Oxidation (M))|F}Y 7.6387;7.2678;6.9532;6.9264;6.5962;6.5555;6.4584;6.4416;6.4416;6.2254 -;+;-;-;-;-;-;-;-;- + 2012 + 1 2.123 70060.6 1.0 4478 3530 7999 DOHH2_400M_050219_1,8010 DOHH2_400M_050219_1,8010,YADNQVMHFY True True YADNQVMHFY 44.969276 644.276538074017 1849853.875 7999.0 ENSG00000177084|ENST00000320574|POLE;;ENST00000537064.5_1_12:133201285-133234573:-|nuORF 8.57861359914144 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8011 44.973 190.0 382910.0 25 0 30029.0 + -1 NAYMKSLL 8 112 470.2526172706449 938.49068160809 2 470.2524291872978 MULTI CID FTMS 0 0 0 7999 168430.53125 0.571099172984514 -1 0.1241493225097656 12 Carbamidomethyl (C) _SIKVYC(Carbamidomethyl (C))GL_ nc|ENSG00000100365|Q15080-3|NCF4;ENSG00000100365|ENST00000248899|NCF4 23.1484247019978 0.5573009939494978 1 {[QG]|[NA]}YM 4 -1 45.445 0.0 0.0 4.8424 0.0 0.0 0.0 456.28237856286194 456.28237856286194 30.1881331321381 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[QG]|[NA]}YM 4.8424 - 181 + 1 2.123 57604.7 1.0 4479 3530 7999 DOHH2_400M_050219_1,8011 DOHH2_400M_050219_1,8011,SIKVYCGL False False NAYMKSLL 44.972922 470.252429187298 3398653.75 7999.0 nc|ENSG00000100365|Q15080-3|NCF4;;ENSG00000100365|ENST00000248899|NCF4 3.589346726735433 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8012 44.981 441.0 206920.0 25 0 12012.0 + 807 AESPVFKEL 9 130 510.2729410517878 1018.5313291703756 2 510.2728454470634 MULTI CID FTMS 0 0 0 7999 116371.9921875 0.9575039433134788 -2 0.2302360534667968 13 Unmodified _AESPVFKEL_ ENSG00000168575|ENST00000520262|SLC20A2 23.78978130925829 0.2284941198415988 1 WTPV{M(Oxidation (M))|F}{[VA]|[{I|L}G]}S{I|L} 9 6 + 33.95 0.0 0.0 3.3332 3.3332 70.721 0.0 0.0 0.0 7.3581788183012335 1.2147820449879347 1.2147820449879347 1.9504625720438968 0 0.3807196863200844 0.0 0.0 0.0 WTPV{M(Oxidation (M))|F}{[VA]|[{I|L}G]}S{I|L};{[CP]|[EA]}SPV{M(Oxidation (M))|F}{[VA]|[{I|L}G]}S{I|L} 3.3332;3.1417 -;- 401 + 1 2.123 73517.1 1.0 4480 3530 7999 DOHH2_400M_050219_1,8012 DOHH2_400M_050219_1,8012,AESPVFKEL False True AESPVFKEL 44.980758 510.272845447063 1296327.25 7999.0 ENSG00000168575|ENST00000520262|SLC20A2 6.595265865325928 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8013 44.995 800.0 131330.0 25 0 19780.0 -1 LLMTGRLKKY 10 123 619.8692438564378 1237.7239347796756 2 619.8692504763603 MULTI CID FTMS 0 0 0 7999 101325.34375 0.1967396926201507 -8 0.95001220703125 14 Oxidation (M) _LLM(Oxidation (M))TGRLKKY_ ENSG00000095464|ENST00000371447|PDE6C 1.844237919475145 0.7181058121064529 1 Y 1 -1 13.495 0.0 0.0 1.0903 0.0 0.0 1056.6497140538927 0.0 1056.6497140538927 0.0 3.9275708279432457 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0903 + + 17 + 1 2.123 80736.6 0.6000000238418579 4481 3530 7999 DOHH2_400M_050219_1,8013 DOHH2_400M_050219_1,8013,LLMTGRLKKY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8014 45.008 800.0 140840.0 25 0 10913.0 + + -1 YTDAPPAYSELY 12 153 695.3140985461991 1388.6136441591982 2 695.8145019412041 MULTI CID FTMS 0 0 0 7999 96723.421875 0.6678051889516914 -3 0.3186073303222656 15 Carbamidomethyl (C) _LC(Carbamidomethyl (C))IEEIESAYY_ ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 13.042465956692816 0.7638483625850725 1 [YT]DAPPAY{[ES]|[DT]|[{I|L}C]}{I|L}Y 12 -1 + 75.937 0.0 0.0 5.4686 5.4686 83.504 0.0 0.0 0.0 8.49485002168008 11.394615430168985 8.49485002168008 7.271212547196612 0 1.4826446478103827 1.3010299956639813 1.9049471895720984 0.0 [YT]DAPPAY{[ES]|[DT]|[{I|L}C]}{I|L}Y;[YT]DAPPYA{[ES]|[DT]|[{I|L}C]}{I|L}Y;{[ES]|[DT]|[{I|L}C]}YAPPAY{[ES]|[DT]|[{I|L}C]}{I|L}Y;{[ES]|[DT]|[{I|L}C]}YAPP{I|L}CS{M(Oxidation (M))|F}{I|L}Y;{[ES]|[DT]|[{I|L}C]}YAPPA[MT]{M(Oxidation (M))|F}{I|L}Y;{[ES]|[DT]|[{I|L}C]}YAPPYA{[ES]|[DT]|[{I|L}C]}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}SC{I|L}PPAD[{M(Oxidation (M))|F}V];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}[MT]APPAD[{M(Oxidation (M))|F}V];{[ES]|[DT]|[{I|L}C]}AYPPAY{[ES]|[DT]|[{I|L}C]}{I|L}Y;[YT]D[HK]AY{[ES]|[DT]|[{I|L}C]}{I|L}Y 5.4686;4.9449;4.8568;4.7291;4.4958;4.3332;4.0489;3.8156;3.801;3.7782 -;-;-;-;-;-;-;-;-;- 3934 1 2.123 85702.5 0.6000000238418579 4482 3530 7999 DOHH2_400M_050219_1,8014 DOHH2_400M_050219_1,8014,LCIEEIESAYY False False YTDAPPAYSELY 45.008426 695.3135 1828552.125 7999.0 ENSG00000183283|ENST00000412716|DAZAP2;;nc|ENSG00000183283|Q15038-2|DAZAP2;;nc|ENSG00000183283|Q15038-5|DAZAP2;;nc|ENSG00000183283|Q15038-6|DAZAP2 7.652798652648926 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8015 45.02 674.0 204020.0 25 0 26689.0 + 16265 IVTAHAFVM 9 149 494.7681133439987 987.5216737547976 2 494.7675659060478 MULTI CID FTMS 0 0 0 7999 93973.9453125 0.6282382932584587 -1 0.1241493225097656 16 Unmodified _IVTAHAFVM_ ENSG00000198804|ENST00000361624|MT-CO1 53.57557251787612 0.0325303259649373 1 [HA]TA{M(Oxidation (M))|F}V{I|L}VM 9 5 + 50.727 0.0 0.0 5.1368 5.1368 79.822 0.0 0.0 0.0 4.762036441594191 27.148167490521168 4.762036441594191 4.696304488753022 0 0.6989700043360187 0.0 0.9634679910804403 0.0 [HA]TA{M(Oxidation (M))|F}V{I|L}VM;[HA]TA{I|L}V{M(Oxidation (M))|F}VM;[HA]AT{M(Oxidation (M))|F}V{I|L}VM;[HA]TA{M(Oxidation (M))|F}VV{I|L}M;[HA]TAV{M(Oxidation (M))|F}{I|L}VM;[HA]AT{I|L}V{M(Oxidation (M))|F}VM;[HA]TAV{I|L}{M(Oxidation (M))|F}VM;[HA]TV{I|L}A{M(Oxidation (M))|F}VM;[HA]{M(Oxidation (M))|F}ATV{I|L}VM;[HA]TVA{M(Oxidation (M))|F}{I|L}VM 5.1368;4.6612;4.429;4.0925;4.0823;3.9534;3.7404;3.663;3.6535;3.5599 -;-;-;-;-;-;-;-;-;- 1087 1 2.123 106733.6 1.0 4483 3530 7999 DOHH2_400M_050219_1,8015 DOHH2_400M_050219_1,8015,IVTAHAFVM True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8016 45.025 204.0 415870.0 25 0 58048.0 + 14956 ILMYRAPI 8 91 488.7870440807406 0 488.7885009646416 PEAK CID FTMS 0 0 0 7999 94699.53125 0.4157924528987926 -1 0.1241493225097656 17 Unmodified _ILMYRAPI_ REV__ENST00000541076.6_1_12:123640092-123640227:-|nuORF 28.17323086031832 0.2634958848191769 1 D{I|L}YM 4 -1 14.513 0.0 0.0 1.4877 0.0 0.0 227.18442644097496 223.1455019586547 450.3299283996297 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 D{I|L}YM 1.4877 - 70 + 1 2.123 73104.7 1.0 4484 3530 7999 DOHH2_400M_050219_1,8016 DOHH2_400M_050219_1,8016,ILMYRAPI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8017 45.029 182.0 566920.0 25 0 65022.0 37264 TINLQFKIQ 9 104 552.8240763646091 1103.6335997960182 2 552.8232910037041 MULTI CID FTMS 0 0 0 7999 310459.65625 1.0 0 0.0 18 Unmodified _TINLQFKIQ_ ENSG00000070718|ENST00000396926|AP3M2 7.910154910731844 0.6385446671287552 1 {M(Oxidation (M))|F} 1 8 10.596 0.0 0.0 0.9601 0.0 0.0 938.5539927176964 0.0 938.5539927176964 0.0 0.918221984730634 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.9601 + + 35 + 1 2.123 84425.6 1.0 4485 3530 7999 DOHH2_400M_050219_1,8017 DOHH2_400M_050219_1,8017,TINLQFKIQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8018 45.034 242.0 291880.0 25 0 24186.0 + 7937 ELRPLPVSV 9 100 505.3068822140849 1008.5992114949698 2 505.3061706423759 MULTI CID FTMS 0 0 0 7999 173475.640625 1.0 0 0.0 19 Unmodified _ELRPLPVSV_ ENSG00000175166|ENST00000310118|PSMD2;ENST00000491494.1_1_3:184025740-184026364:+|nuORF;nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2 36.506200033944 0.094635877243972 1 [{I|L}V]W[{I|L}P]PVSV 9 2 + 49.429 0.0 0.0 4.9008 4.9008 73.933 0.0 0.0 0.0 0.6214790674884441 14.973024840566469 0.6214790674884441 0.6214790674884441 0 0.9247425010840048 0.8860566476931632 0.5 0.0 [{I|L}V]W[{I|L}P]PVSV;[VP]Q[RK]PVSV;[{I|L}P]N[RK]PVSV;[VP][AG][RK]PVSV;[QP]V[RK]PVSV;[{I|L}P]GG[RK]PVSV;[VP]Q[RK]PWV;[{I|L}P]N[RK]PWV;[VP][AG][RK]PWV;[QP]V[RK]PWV 4.9008;4.8392;4.2005;3.9262;3.6784;3.2875;3.2054;2.5667;2.2871;2.0447 -;-;-;-;-;-;-;-;-;- 447 1 2.123 58250.8 1.0 4486 3530 7999 DOHH2_400M_050219_1,8018 DOHH2_400M_050219_1,8018,ELRPLPVSV True True ELRPLPVSV 45.033545 505.306170642376 1075996.875 7999.0 nc|ENSG00000175166|Q13200-3|PSMD2;;ENST00000491494.1_1_3:184025740-184026364:+|nuORF;;nc|ENSG00000175166|Q13200-2|PSMD2;;ENSG00000175166|ENST00000310118|PSMD2 2.820475816726685 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8019 45.041 428.0 136450.0 25 0 9316.0 + 14451 IFSRLIEGP 9 118 516.2961052951372 1030.5776576570745 2 516.2974731326103 MULTI CID FTMS 0 0 0 7999 137306.765625 0.3603445132550236 5 -0.3605155944824219 20 Unmodified _IFSRLIEGP_ REV__ENST00000519798.1_1_8:75897034-75924708:+|nuORF 8.593279151180031 0.6146971463335029 1 {I|L} 1 -1 11.259 0.0 0.0 1.0925 0.0 0.0 899.4825476490649 0.0 899.4825476490649 0.0 4.269359821608809 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0925 + + 66 + 1 2.123 50108.9 1.0 4487 3530 7999 DOHH2_400M_050219_1,8019 DOHH2_400M_050219_1,8019,IFSRLIEGP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8021 45.046 18.0 2877200.0 25 0 660140.0 30248 QWVRLLYR 8 76 567.3300135817798 1132.6454742303597 2 567.3303710818291 MULTI CID FTMS 0 0 0 8020 3408742.75 1.0 0 0.0 1 Unmodified _QWVRLLYR_ ENSG00000142530|ENST00000600100|GARIN5A;nc|ENSG00000142530|Q6IPT2-2|GARIN5A 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.124 45592.3 1.0 4488 3531 8020 DOHH2_400M_050219_1,8021 DOHH2_400M_050219_1,8021,QWVRLLYR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8022 45.06 800.0 105150.0 25 0 5564.8 -1 RRHRRCRRRCC 11 108 864.9386316043615 1727.8627102755229 2 865.4397460818291 MULTI CID FTMS 0 0 0 8020 113540.40625 0.3826654623454058 2 -0.0775794982910156 2 3 Carbamidomethyl (C) _RRHRRC(Carbamidomethyl (C))RRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENSG00000184560|ENST00000333870|SPEM2 0.3070304955306653 0.8736993455979228 1 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ 9 -1 68.338 0.0 0.0 3.9551 0.0 0.0 0.0 731.3508394830686 731.3508394830686 45.37909996297415 0.0 0.0 0.0 0 1.6237125054200234 2.0 0.0 0.7742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ 3.9551 - 1891 + 1 2.124 61747.4 0.8399999737739563 4489 3531 8020 DOHH2_400M_050219_1,8022 DOHH2_400M_050219_1,8022,RRHRRCRRRCC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8023 45.062 82.0 863950.0 25 0 221770.0 + 30018 QTLLGKLM 8 69 452.2702150301735 902.525877127147 2 452.2702514529228 MULTI CID FTMS 0 0 0 8020 655152.75 0.3395892381789432 -3 0.3314285278320312 3 Unmodified _QTLLGKLM_ REV__ENSG00000081248|ENST00000362061|CACNA1S 22.736283301280096 0.5659792798204337 1 KV{I|L}{I|L}M 5 -1 45.573 0.0 0.0 5.0495 0.0 0.0 300.1432057111344 0.0 300.1432057111344 0.0 28.15044357464103 0.0 0.0 0 1.0 0.0 0.0 0.0 KV{I|L}{I|L}M 5.0495 - 103 1 2.124 62493.9 1.0 4490 3531 8020 DOHH2_400M_050219_1,8023 DOHH2_400M_050219_1,8023,QTLLGKLM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8024 45.066 233.0 313620.0 25 0 28001.0 + 30067 QVDFSPDMSY 10 103 594.7471628777023 1187.4797728222045 2 594.7476684451103 MULTI CID FTMS 0 0 0 8020 288044.71875 0.7354862755677649 -2 0.225341796875 4 Unmodified _QVDFSPDMSY_ ENSG00000168438|ENST00000307731|CDC40;ENST00000606893.5_1_6:110533295-110551331:+|nuORF 61.60191391372663 0.0323840705564037 1 {[QV]|[N{I|L}]|[RA]|[KV]}D{M(Oxidation (M))|F}S[DP]MSY 10 0 + 52.892 0.0 0.0 4.4541 4.4541 85.11 0.0 0.0 0.0 15.155539043557743 11.20506544868192 11.20506544868192 15.155539043557743 0 1.1331596456423734 1.3010299956639813 1.3807196863200843 1.0920376344600455 + + {[QV]|[N{I|L}]|[RA]|[KV]}D{M(Oxidation (M))|F}S[DP]MSY;[DP]MSK{[ET]|[MV]}MSY;[DP]SMK{[ET]|[MV]}MSY;{[QV]|[N{I|L}]|[RA]|[KV]}D{[ES]|[DT]|[{I|L}C]}{[ET]|[MV]}MSY;[HM]M[QT]S{M(Oxidation (M))|F}GSY;{[MS]|[{M(Oxidation (M))|F}A]}[DP]K{[ET]|[MV]}MSY;[HM]M[QT][YQ]SY;[HM]M[{M(Oxidation (M))|F}E]{I|L}MSY;[HM]M{[ET]|[MV]}{M(Oxidation (M))|F}{[ET]|[MV]}Y;{[{M(Oxidation (M))|F}D]|MM}{[QV]|[N{I|L}]|[RA]|[KV]}S[DP]MSY 4.4541;3.1779;2.9244;2.8413;2.6553;2.5113;2.2949;2.2882;2.081;1.9673 +;-;-;-;-;-;-;-;-;- + 386 1 2.124 61732.2 1.0 4491 3531 8020 DOHH2_400M_050219_1,8024 DOHH2_400M_050219_1,8024,QVDFSPDMSY True True QVDFSPDMSY 45.066047 594.74766844511 2386145.0 8020.0 ENSG00000168438|ENST00000307731|CDC40;;ENST00000606893.5_1_6:110533295-110551331:+|nuORF 6.919171174367269 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8025 45.074 444.0 228470.0 25 0 12158.0 + + -1 SEALGDNVKQYW 12 133 705.3398559459824 1408.6651589587648 2 705.3409301638603 MULTI CID FTMS 0 0 0 8020 115339.6484375 0.8200721404743989 -1 0.1011924743652343 5 Carbamidomethyl (C) _LELTIEFC(Carbamidomethyl (C))QAW_ ENSG00000152382|ENST00000367874|TADA1 19.256988751693697 0.6345794173041263 1 {[QN]|[E{I|L}]|[KN]}{I|L}G[DN]Y{M(Oxidation (M))|F}G{I|L} 10 -1 45.406 0.0 0.0 3.2233 0.0 0.0 0.0 284.0878633867523 284.0878633867523 25.08477374279754 0.0 0.0 0.0 0 0.7302046884880938 1.154901959985743 1.7530834337684316 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}{I|L}G[DN]Y{M(Oxidation (M))|F}G{I|L} 3.2233 - 1992 1 2.124 76285.3 1.0 4492 3531 8020 DOHH2_400M_050219_1,8025 DOHH2_400M_050219_1,8025,LELTIEFCQAW False False SEALGDNVKQYW 45.073957 705.34093016386 946466.1875 8020.0 ENSG00000152382|ENST00000367874|TADA1 5.517325242360433 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8027 45.079 73.0 772890.0 25 0 89705.0 + 5314 DLDSRVLYY 9 85 572.2872084896657 1142.5598640461312 2 572.2875854372978 MULTI CID FTMS 0 0 0 8026 475989.90625 0.034766894804905 4 -0.2449607849121093 1 Unmodified _DLDSRVLYY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 29.84058131909904 0.1515068451768857 1 {NN|[MP]|[D{I|L}]|[EV]}[VS][RD]{I|L}YY 9 2 + 52.17 0.0 0.0 4.566 4.566 75.243 0.0 0.0 0.0 2.5134875797167666 2.5134875797167666 2.5134875797167666 2.5134875797167666 0 1.3807196863200843 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[VS][RD]{I|L}YY;{NN|[MP]|[D{I|L}]|[EV]}[QT]V{[QN]|[E{I|L}]|[KN]}YY;{[TV]|[{I|L}S]}[DV][RD]{I|L}YY;{[TV]|[{I|L}S]}[RV]DD{I|L}YY;{[TV]|[{I|L}S]}[RV]YD{NN|[MP]|[D{I|L}]|[EV]}Y 4.566;4.346;2.7956;2.378;1.2593 -;-;-;-;- 119 1 2.124 47945.2 1.0 4493 3532 8026 DOHH2_400M_050219_1,8027 DOHH2_400M_050219_1,8027,DLDSRVLYY False True DLDSRVLYY 45.078743 572.287585437298 231315720.0 8026.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 7.272123018900554 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8028 45.093 800.0 104200.0 25 0 18416.0 37424 TLDAVKFSQY 10 129 586.3044697058889 1170.5943864785777 2 586.3029052615166 MULTI CID FTMS 0 0 0 8026 19123.865234375 0.2259003836473855 1 -0.0448074340820312 2 Unmodified _TLDAVKFSQY_ ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF 10.823927491677226 0.6659270209832991 1 QY 2 8 14.865 0.0 0.0 1.2699 0.0 0.0 861.4616788143184 0.0 861.4616788143184 0.0 2.875240784723374 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + QY 1.2699 + + 88 + 1 2.124 69045.7 0.5 4494 3532 8026 DOHH2_400M_050219_1,8028 DOHH2_400M_050219_1,8028,TLDAVKFSQY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8029 45.095 109.0 565180.0 25 0 124570.0 3473 CGGLPAASPLL 11 90 499.7684537920485 997.522354650897 2 499.7693359255791 MULTI CID FTMS 0 0 0 8026 309150.9375 0.6274205702858202 -2 0.1339645385742187 3 Unmodified _CGGLPAASPLL_ ENST00000487002.1_1_1:155279546-155279798:+|nuORF 24.020572477871973 0.5281922720044371 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YT]A[PS]{I|L}{I|L} 9 5 + 38.86 0.0 0.0 3.8957 3.8957 78.603 0.0 0.0 0.0 2.173392606792042 16.01937464544563 2.173392606792042 8.023787536356583 0 1.25 0.0 0.9247425010840048 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YT]A[PS]{I|L}{I|L};{[TV]|[{I|L}S]}[MT]H[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K][KC]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[C(Carbamidomethyl (C))R][KT]{I|L} 3.8957;3.0913;2.3218;1.8423 -;-;-;- 319 1 2.124 53455.7 1.0 4495 3532 8026 DOHH2_400M_050219_1,8029 DOHH2_400M_050219_1,8029,CGGLPAASPLL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8030 45.1 291.0 124040.0 25 0 6936.9 + 16437 KAFRQPLCL 9 85 538.307436572979 1074.600320212758 2 538.3094970583916 MULTI CID FTMS 0 0 0 8026 133302.828125 0.1710795437226978 -4 0.3642005920410156 4 Unmodified _KAFRQPLCL_ REV__ENSG00000089682|ENST00000685964|RBM41;REV__ENST00000471079.1_1_X:106358576-106359983:-|nuORF;REV__nc|ENSG00000089682|Q96IZ5-2|RBM41;REV__nc|ENSG00000089682|Q96IZ5-3|RBM41;REV__nc|ENSG00000089682|Q96IZ5|RBM41 7.910154910731844 0.6385446671287552 1 Y 1 -1 11.99 0.0 0.0 1.1157 0.0 0.0 893.5257180172486 0.0 893.5257180172486 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1157 - 34 + 1 2.124 33725.1 1.0 4496 3532 8026 DOHH2_400M_050219_1,8030 DOHH2_400M_050219_1,8030,KAFRQPLCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8031 45.114 800.0 121360.0 25 0 10287.0 -1 FSEMFCFKRYF 11 102 789.3481884437466 1576.6818239542931 2 789.3484374880791 MULTI CID FTMS 0 0 0 8026 95698.328125 0.8921124855106387 -1 0.0327720642089843 5 Carbamidomethyl (C),Oxidation (M) _FSEM(Oxidation (M))FC(Carbamidomethyl (C))FKRYF_ ENST00000370487.4_1_20:61431489-61431786:+|nuORF 2.9952420565917617 0.861016188266951 1 {[QG]|[NA]}G[H{I|L}]DEAQQNA{M(Oxidation (M))|F}Y 14 -1 + 85.415 0.0 0.0 5.4174 5.4174 80.679 0.0 0.0 0.0 4.540450833488308 10.7521226932964 4.540450833488308 4.540450833488308 0 0.8182503180159344 0.8538719643217619 0.7302046884880937 1.066901560044258 {[QG]|[NA]}G[H{I|L}]DEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[H{I|L}]DEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[H{I|L}]DEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[H{I|L}]DEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[H{I|L}]DEA[AG]QNA{M(Oxidation (M))|F}Y;[AG]N[H{I|L}]DEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[H{I|L}]DEAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[H{I|L}]DEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[H{I|L}]DEA[AG]QNA{M(Oxidation (M))|F}Y;[AG]GG[H{I|L}]DEAQQNA{M(Oxidation (M))|F}Y 5.4174;5.1294;4.8434;4.8434;4.8434;4.7274;4.554;4.554;4.554;4.4499 -;-;-;-;-;-;-;-;-;- 1444 1 2.124 72047.4 0.5699999928474426 4497 3532 8026 DOHH2_400M_050219_1,8031 DOHH2_400M_050219_1,8031,FSEMFCFKRYF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8032 45.119 250.0 413070.0 25 0 52486.0 -1 VSRHHRLP 8 128 522.2956761450827 1042.5767993569652 2 522.2959472537041 MULTI CID FTMS 0 0 0 8026 185670.125 0.2551282046877904 -5 0.4525718688964844 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VSRHHRLP_ ENST00000243253.7_1_3:127789476-127789554:+|nuORF 7.910154910731844 0.7763180056447161 1 M 1 -1 10.713 0.0 0.0 1.0276 0.0 0.0 893.5252531917293 0.0 893.5252531917293 0.0 1.1804459436548331 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.0276 - 93 + 1 2.124 81975.6 1.0 4498 3532 8026 DOHH2_400M_050219_1,8032 DOHH2_400M_050219_1,8032,VSRHHRLP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8034 45.124 58.0 1027300.0 25 0 98397.0 + 11199 GENLPPLTY 9 89 502.2585408742066 1002.5025288152132 2 502.2585632205009 MULTI CID FTMS 0 0 0 8033 1078158.5 1.0 0 0.0 1 Unmodified _GENLPPLTY_ ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1 60.07390631473393 0.0260411565414776 1 {[DA]|[EG]}N{I|L}PPT{I|L}Y 9 2 + 48.497 0.0 0.0 4.8376 4.8376 81.692 0.0 0.0 0.0 8.447209416731809 18.09054065780998 8.447209416731809 8.010299956639813 0 1.3935078169319297 1.3010299956639813 0.25 0.0 {[DA]|[EG]}N{I|L}PPT{I|L}Y;{[DA]|[EG]}NP{I|L}PT{I|L}Y;{[DA]|[EG]}GG{I|L}PPT{I|L}Y;[Y{M(Oxidation (M))|F}]S{I|L}P{I|L}TY;{[DA]|[EG]}GGP{I|L}PT{I|L}Y;[{I|L}P]P{[QG]|[NA]}DT{I|L}Y;{[DA]|[EG]}[KA]P[{I|L}P]EY;[{I|L}P]P{[QG]|[NA]}{I|L}SEY;{[DA]|[EG]}[KA]P[EP]{I|L}Y;[Y{M(Oxidation (M))|F}][{I|L}P]S{I|L}TY 4.8376;4.0385;3.919;3.1353;3.12;2.2725;2.0002;1.8017;1.6999;1.3884 -;-;-;-;-;-;-;-;-;- 321 1 2.124 51974.6 1.0 4499 3533 8033 DOHH2_400M_050219_1,8034 DOHH2_400M_050219_1,8034,GENLPPLTY True True GENLPPLTY 45.123548 502.258563220501 23936354.0 8033.0 ENSG00000001630|ENST00000003100|CYP51A1;;nc|ENSG00000001630|Q16850-2|CYP51A1;;ENST00000419457.1_1_13:29296686-29297403:-|nuORF 7.805288314819336 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8035 45.125 50.0 1054100.0 25 0 164180.0 23254 LSVKIWDLN 9 83 544.3088817440029 1086.6032105548056 2 544.3091918826103 MULTI CID FTMS 0 0 0 8033 824834.1875 0.7128491502426335 3 -0.2001533508300781 2 Unmodified _LSVKIWDLN_ ENSG00000221914|ENST00000380737|PPP2R2A;ENST00000517754.1_1_8:26221160-26227926:+|nuORF;nc|ENSG00000221914|P63151-2|PPP2R2A 11.640296217721598 0.521594087909532 1 Y 1 9 11.42 0.0 0.0 1.051 0.0 0.0 905.5288219823432 0.0 905.5288219823432 0.0 1.031928780762442 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.051 - 29 + 1 2.124 49669.2 1.0 4500 3533 8033 DOHH2_400M_050219_1,8035 DOHH2_400M_050219_1,8035,LSVKIWDLN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8036 45.126 55.0 917890.0 25 0 78062.0 + 8369 ESDLDYIQY 9 81 573.2536896283244 1144.4928263234488 2 573.2540771365166 MULTI CID FTMS 0 0 0 8033 729967.125 0.500887571579114 -1 0.0448074340820312 3 Unmodified _ESDLDYIQY_ ENSG00000182628|ENST00000330137|SKA2;ENST00000437036.6_1_17:57189640-57232487:-|nuORF;ENST00000583976.1_1_17:57189640-57232487:-|nuORF 36.04419817259434 0.0971720506436186 1 {NN|[MP]|[D{I|L}]|[EV]}DSEY 6 5 22.4 0.0 0.0 1.9572 0.0 0.0 0.0 419.19171483346753 419.19171483346753 2.579788405306616 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.9247425010840048 0.0 {NN|[MP]|[D{I|L}]|[EV]}DSEY 1.9572 - 121 1 2.124 44296.1 1.0 4501 3533 8033 DOHH2_400M_050219_1,8036 DOHH2_400M_050219_1,8036,ESDLDYIQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8037 45.129 120.0 518420.0 25 0 96304.0 + 21417 LPGQPPLRGSR 11 79 589.342815811877 1176.671078690554 2 589.3433105349541 MULTI CID FTMS 0 0 0 8033 464994.625 0.4060080942796618 6 -0.5292587280273438 4 Unmodified _LPGQPPLRGSR_ REV__ENST00000601658.5_1_2:149634897-149646240:-|nuORF 2.9952420565917617 0.861016188266951 1 P 1 -1 6.9897 0.0 0.0 0.59402 0.0 0.0 587.3584699032477 489.2377413385376 1076.596211241785 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.59402 + + 12 + 1 2.124 52419.1 1.0 4502 3533 8033 DOHH2_400M_050219_1,8037 DOHH2_400M_050219_1,8037,LPGQPPLRGSR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8038 45.131 97.0 656030.0 25 0 101860.0 12187 GQQRLLPQ 8 99 470.2732192244263 938.5318855156528 2 470.2726013064384 MULTI CID FTMS 0 0 0 8033 366045.90625 0.7726667657885061 -1 0.0448074340820312 5 Unmodified _GQQRLLPQ_ ENST00000602438.1_1_19:19260237-19296893:-|nuORF 8.593279151180031 0.7721714526254883 1 {[QG]|[NA]}Y 3 6 19.041 0.0 0.0 2.0288 0.0 0.0 0.0 587.3638611838745 587.3638611838745 7.93182501400722 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[QG]|[NA]}Y 2.0288 - 22 1 2.124 53095.1 1.0 4503 3533 8033 DOHH2_400M_050219_1,8038 DOHH2_400M_050219_1,8038,GQQRLLPQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8039 45.135 213.0 424810.0 25 0 55751.0 14543 IHAKKVNF 8 114 478.7856270504519 955.556701167704 2 478.7852661013603 MULTI CID FTMS 0 0 0 8033 176007.578125 0.8228397897495261 -1 0.0448074340820312 6 Unmodified _IHAKKVNF_ ENSG00000100003|ENST00000615189|SEC14L2;nc|ENSG00000100003|O76054-5|SEC14L2 5.760428011301431 0.7893668129297577 1 N{M(Oxidation (M))|F} 2 6 15.401 0.0 0.0 1.6117 0.0 0.0 676.4348272436789 0.0 676.4348272436789 0.0 2.8980247405780872 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + N{M(Oxidation (M))|F} 1.6117 + + 45 + 1 2.124 73552.2 1.0 4504 3533 8033 DOHH2_400M_050219_1,8039 DOHH2_400M_050219_1,8039,IHAKKVNF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8040 45.149 800.0 143020.0 25 0 19967.0 41612 VPPLVWKLGW 10 148 597.856461703229 1193.698370473258 2 597.8569213747978 MULTI CID FTMS 0 0 0 8033 148351.625 0.1436713946280585 -9 0.8898048400878906 7 Unmodified _VPPLVWKLGW_ ENSG00000197386|ENST00000355072|HTT 1.844237919475145 0.7181058121064529 1 Y 1 10 11.783 0.0 0.0 0.98708 0.0 0.0 1012.6239208656392 0.0 1012.6239208656392 0.0 2.105026563703652 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.98708 - 67 + 1 2.124 86980.0 0.6499999761581421 4505 3533 8033 DOHH2_400M_050219_1,8040 DOHH2_400M_050219_1,8040,VPPLVWKLGW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8041 45.163 800.0 224240.0 25 0 20572.0 + 45518 YTSYPMHDFY 10 154 662.2713972232658 1322.5282415133315 2 662.2720214724541 MULTI CID FTMS 0 0 0 8033 134877.359375 0.7227187245007911 -1 0.0448074340820312 8 Unmodified _YTSYPMHDFY_ ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11 56.17704186161178 0.0466144807663799 1 YTSYP[KC]{M(Oxidation (M))|F}EW 10 5 + 75.522 0.0 0.0 5.7105 5.7105 78.051 0.0 0.0 0.0 19.29571017848604 1.5720071717674529 1.5720071717674529 1.5720071717674529 0 0.5796896906561032 1.5228787452803376 0.75 0.0 YTSYP[KC]{M(Oxidation (M))|F}EW;YTSYP[WC(Carbamidomethyl (C))]SPY;YTSYP[KC]{M(Oxidation (M))|F}SMP;YTSYPM[QA]CPY;YT[HM]Y{M(Oxidation (M))|F}DSPY;YT[QA]EC{M(Oxidation (M))|F}{M(Oxidation (M))|F}EW;YTSYP[KC]{M(Oxidation (M))|F}N[NS];YTSYY[YT]CPY;YTSYP[WC(Carbamidomethyl (C))]SYP;YT[QA]ESYDSPY 5.7105;5.5916;5.3447;5.1669;5.0964;5.0821;5.0042;4.9798;4.9433;4.872 -;-;-;-;-;-;-;-;-;- 5292 + 1 2.124 131999.8 0.6499999761581421 4506 3533 8033 DOHH2_400M_050219_1,8041 DOHH2_400M_050219_1,8041,YTSYPMHDFY True True YTSYPMHDFY 45.162594 662.272021472454 1296752.375 8033.0 ENSG00000138081|ENST00000403359|FBXO11;;nc|ENSG00000138081|Q86XK2-5|FBXO11;;nc|ENSG00000138081|Q86XK2-6|FBXO11 6.844150861104329 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8042 45.168 288.0 209230.0 25 0 33029.0 8098 EPFLYEIFRY 10 78 459.56638571451214 1375.6773277437364 3 459.5663940310478 MULTI CID FTMS 0 0 0 8033 135187.5 1.0 0 0.0 9 Unmodified _EPFLYEIFRY_ ENSG00000112276|ENST00000314641|BVES 1.5922808571145557 0.719271260938363 1 PY 2 8 16.198 0.0 0.0 1.1774 0.0 0.0 1097.546573204477 0.0 1097.546573204477 0.0 3.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 PY 1.1774 - 23 + 1 2.124 57550.2 1.0 4507 3533 8033 DOHH2_400M_050219_1,8042 DOHH2_400M_050219_1,8042,EPFLYEIFRY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8043 45.179 619.0 321030.0 25 0 15102.0 + 24590 MLILIELLY 9 208 374.2294040058044 1119.6663826176132 3 374.2293578982353 MULTI CID FTMS 0 0 0 8033 93218.0625 1.0 0 0.0 10 Unmodified _MLILIELLY_ REV__ENST00000520248.1_1_8:79672597-79674655:-|nuORF 24.67388899826682 0.2172451872415813 1 {I|L}E{I|L}{I|L}Y 5 -1 18.659 0.0 0.0 1.6664 0.0 0.0 470.2958037147721 0.0 470.2958037147721 0.0 3.174100046527357 0.0 0.0 0 0.3182503180159344 0.0 0.7059771852360797 0.0 {I|L}E{I|L}{I|L}Y 1.6664 + + 158 1 2.124 158078.2 1.0 4508 3533 8033 DOHH2_400M_050219_1,8043 DOHH2_400M_050219_1,8043,MLILIELLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8044 45.193 800.0 161940.0 25 0 12757.0 -1 CQCLLPSSGF 10 162 584.7582289932291 1167.501905053258 2 584.7586547732353 MULTI CID FTMS 0 0 0 8033 97267.1875 1.0 0 0.0 11 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))QC(Carbamidomethyl (C))LLPSSGF_ ENST00000527862.1_1_17:42811411-42826726:+|nuORF;nc|ENSG00000161692|Q8NFT6-3|DBF4B 18.1463463914782 0.5430639438673815 1 ME 2 -1 42.206 0.0 0.0 3.6151 0.0 0.0 0.0 904.3896882052964 904.3896882052964 13.00429096882571 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 ME 3.6151 - 462 + 1 2.124 100864.7 0.5299999713897705 4509 3533 8033 DOHH2_400M_050219_1,8044 DOHH2_400M_050219_1,8044,CQCLLPSSGF False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_1 8045 45.208 800.0 54821.0 25 0 3674.0 + 35293 SSNNAVIEL 9 80 946.4852326106816 945.4779561440814 1 946.4851562380792 MULTI CID FTMS 0 0 0 8033 105781.46875 0.5071079990241375 2 -0.1817436218261718 12 Unmodified _SSNNAVIEL_ ENSG00000165506|ENST00000298292|DNAAF2;nc|ENSG00000165506|Q9NVR5-2|DNAAF2 56.17704186161178 0.0281986971544335 1 {[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))AV{I|L}E{I|L} 8 3 + 73.414 0.0 0.0 7.7648 7.7648 93.251 0.0 0.0 0.0 27.14964095499696 53.93273655296432 27.14964095499696 9.262137858390815 0 0.0 0.0 1.3556270500406935 1.774227503252014 {[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))AV{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[CG]AV{I|L}E{I|L} 7.7648;6.7851 -;- 157 1 2.124 35742.6 0.5899999737739563 4510 3533 8033 DOHH2_400M_050219_1,8045 DOHH2_400M_050219_1,8045,SSNNAVIEL True True SSNNAVIEL 45.207525 946.485156238079 1222135.0 8033.0 nc|ENSG00000165506|Q9NVR5-2|DNAAF2;;ENSG00000165506|ENST00000298292|DNAAF2 3.028008222579956 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8047 45.213 71.0 740140.0 25 0 146800.0 + 24627 MLPGKPRPALA 11 73 575.8430402078582 1149.6715274825162 2 575.8433715701103 MULTI CID FTMS 0 0 0 8046 870828.0 0.7779114379252461 3 -0.2181625366210937 1 Unmodified _MLPGKPRPALA_ REV__ENST00000273067.4_1_2:217235990-217236398:-|nuORF 1.4819007175156935 0.86815623132643 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.124 47311.3 1.0 4511 3534 8046 DOHH2_400M_050219_1,8047 DOHH2_400M_050219_1,8047,MLPGKPRPALA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8048 45.215 113.0 392240.0 25 0 55752.0 + 9455 FLDDFESKY 9 78 582.266269555388 1162.517986177576 2 582.2663452029228 MULTI CID FTMS 0 0 0 8046 274561.59375 0.2054610204126875 3 -0.2181625366210937 2 Unmodified _FLDDFESKY_ ENSG00000171475|ENST00000323571|WIPF2;ENST00000494757.5_1_17:38375603-38434474:+|nuORF;nc|ENSG00000171475|Q8TF74-2|WIPF2 16.149105407346934 0.3995459350917656 1 {M(Oxidation (M))|F}{I|L}[VS]C(Carbamidomethyl (C))C(Carbamidomethyl (C))SKY 9 4 + 31.137 0.0 0.0 2.6784 2.6784 73.06 0.0 0.0 0.0 19.330241278220857 2.6321927802327885 2.6321927802327885 5.199178382953065 0 0.3054621874040891 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}[VS]C(Carbamidomethyl (C))C(Carbamidomethyl (C))SKY;EE[YT]{[HG]|PP}W{I|L}E;{[ET]|[MV]}[YE]{[HG]|PP}W{I|L}E 2.6784;2.2312;0.83062 -;-;- 143 + 1 2.124 37287.1 1.0 4512 3534 8046 DOHH2_400M_050219_1,8048 DOHH2_400M_050219_1,8048,FLDDFESKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8049 45.217 74.0 809560.0 25 0 56883.0 + 4819 DEVERVITI 9 85 537.2955196191708 1072.5764863051415 2 537.2960082888603 MULTI CID FTMS 0 0 0 8046 521559.78125 0.2393603415048808 -2 0.1335678100585937 3 Unmodified _DEVERVITI_ ENSG00000231500|ENST00000439602|RPS18;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 43.9818466556824 0.0535980856389242 1 V{I|L}T{I|L} 4 5 41.983 0.0 0.0 3.9142 0.0 0.0 628.2827625959 0.0 628.2827625959 0.0 24.67539084659648 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + V{I|L}T{I|L} 3.9142 + + 58 1 2.124 54284.9 1.0 4513 3534 8046 DOHH2_400M_050219_1,8049 DOHH2_400M_050219_1,8049,DEVERVITI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8050 45.22 118.0 679130.0 25 0 38331.0 + 25410 NEAPGPINF 9 107 479.7351411304255 957.455729327651 2 479.7350341677666 MULTI CID FTMS 0 0 0 8046 448395.75 0.7667954254764167 -1 0.0887603759765625 4 Unmodified _NEAPGPINF_ ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B;ENST00000569826.2_1_15:42864283-42864628:+|nuORF 60.07390631473393 0.0260411565414776 1 {[QD]|[EN]|[WG]|[KD]|[RS]}A[PG]P{I|L}N{M(Oxidation (M))|F} 9 0 + 40.381 0.0 0.0 4.2176 4.2176 83.355 0.0 0.0 0.0 16.753544872323182 12.464825806156256 12.464825806156256 11.355129762210922 0 1.1989700043360187 0.0 0.2742275032520141 0.8536348176228749 + + {[QD]|[EN]|[WG]|[KD]|[RS]}A[PG]P{I|L}N{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[QP]P{I|L}N{M(Oxidation (M))|F};[{I|L}P][PG]ANEN{M(Oxidation (M))|F};[{I|L}P][QP]NEN{M(Oxidation (M))|F};[{I|L}P]N[QP]EN{M(Oxidation (M))|F};[WQ]HAA[KA]{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}[R{M(Oxidation (M))|F}]{I|L}N{M(Oxidation (M))|F};[{I|L}P][PG]AGGEN{M(Oxidation (M))|F};[{I|L}P][QP]GGEN{M(Oxidation (M))|F};[PG][{I|L}P]ANEN{M(Oxidation (M))|F} 4.2176;3.0316;2.3047;1.9425;1.6754;1.5517;1.5332;1.343;0.97515;0.90523 +;-;-;-;-;-;-;-;-;- + 186 1 2.124 64327.3 1.0 4514 3534 8046 DOHH2_400M_050219_1,8050 DOHH2_400M_050219_1,8050,NEAPGPINF True True NEAPGPINF 45.219644 479.735034167767 3092501.5 8046.0 ENST00000569826.2_1_15:42864283-42864628:+|nuORF;;ENSG00000101608|ENST00000217652|MYL12A;;ENSG00000118680|ENST00000237500|MYL12B 5.696506897608439 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8051 45.221 78.0 422040.0 25 0 32555.0 + 20002 LILLMLCLGM 10 77 560.3214488402992 1118.6283447473984 2 560.3224365115166 MULTI CID FTMS 0 0 0 8046 459296.625 0.4273808389748507 4 -0.3592529296875 5 Unmodified _LILLMLCLGM_ REV__ENSG00000283654|ENST00000637218|CIROP;REV__nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;REV__nc|ENSG00000283654|A0A1B0GTW7-3|CIROP 4.3292370932331545 0.7066112369704343 1 K{I|L}{I|L}[C(Carbamidomethyl (C))M] 5 -1 17.447 0.0 0.0 1.5597 0.0 0.0 455.29869277168126 0.0 455.29869277168126 0.0 3.9524249272868417 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}{I|L}[C(Carbamidomethyl (C))M] 1.5597 - 32 1 2.124 30981.4 1.0 4515 3534 8046 DOHH2_400M_050219_1,8051 DOHH2_400M_050219_1,8051,LILLMLCLGM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8052 45.224 127.0 515660.0 25 0 46264.0 + 7869 ELLQKIEV 8 106 486.2913873400663 970.5682217469326 2 486.2896606326103 MULTI CID FTMS 0 0 0 8046 313221.9375 0.5014898444711845 -1 0.0887603759765625 6 Unmodified _ELLQKIEV_ ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1 37.97399986684836 0.2681860861828418 1 {[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}V{I|L}GN 8 4 41.562 0.0 0.0 4.2822 0.0 0.0 0.0 82.0669191949828 82.0669191949828 26.61364945096375 0.0 0.0 0.0 0 0.5044321917401079 1.6989700043360187 0.0 1.1445990182825423 {[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}V{I|L}GN 4.2822 - 456 + 1 2.124 56968.9 1.0 4516 3534 8046 DOHH2_400M_050219_1,8052 DOHH2_400M_050219_1,8052,ELLQKIEV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8053 45.231 395.0 402990.0 25 0 38530.0 + + 34371 LTDDGNKWLY 10 141 613.2902465916912 1224.5659402501824 2 613.2908813357353 MULTI CID FTMS 0 0 0 8046 243933.578125 0.1380571320937586 -3 0.1663398742675781 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SLTHFDSTLY_ ENST00000466987.1_1_3:184021130-184021370:+|nuORF;ENSG00000175166|ENST00000310118|PSMD2;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;nc|ENSG00000175166|Q13200-3|PSMD2;nc|ENSG00000175166|Q13200-2|PSMD2 48.345845343767074 0.089859443182303 1 {I|L}TDDGDKW{I|L}Y 10 -1 + 80.11 0.0 0.0 6.5419 6.5419 83.709 0.0 0.0 0.0 3.740925888244874 3.740925888244874 3.740925888244874 3.740925888244874 0 2.467900182820548 2.0 0.3807196863200844 0.0 {I|L}TDDGDKW{I|L}Y;[{I|L}T]DDGDKW{I|L}Y;{I|L}TDDGKDW{I|L}Y;[{I|L}T]D[RN]DDT{I|L}Y;[{I|L}T]DD[RN]DT{I|L}Y;{I|L}TDDGK[TP]C{I|L}Y;[{I|L}T]DD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}{I|L}Y;[{I|L}T]DDGD{[NV]|[RG]}T{I|L}Y;[{I|L}T]D[RN]DSE{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}GDDW{I|L}T{I|L}Y 6.5419;6.2364;6.1486;6.1387;6.1236;5.9341;5.8279;5.6979;5.6694;5.6596 -;-;-;-;-;-;-;-;-;- 6369 + 1 2.124 118892.6 1.0 4517 3534 8046 DOHH2_400M_050219_1,8053 DOHH2_400M_050219_1,8053,SLTHFDSTLY False False LTDDGNKWLY 45.23114 613.2905 0.0 8046.0 ENST00000466987.1_1_3:184021130-184021370:+|nuORF;;ENSG00000175166|ENST00000310118|PSMD2;;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;;nc|ENSG00000175166|Q13200-3|PSMD2;;nc|ENSG00000175166|Q13200-2|PSMD2 5.356911818186442 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8054 45.245 800.0 268370.0 25 0 28777.0 34335 SLSLLRVSW 9 167 530.8097025541832 1059.6048521751663 2 530.8096191287041 MULTI CID FTMS 0 0 0 8046 175121.03125 0.7096190061145244 -1 0.0887603759765625 8 Unmodified _SLSLLRVSW_ ENSG00000033100|ENST00000035307|CHPF2;nc|ENSG00000033100|Q9P2E5-2|CHPF2 7.910154910731844 0.6385446671287552 1 W 1 8 12.474 0.0 0.0 1.1773 0.0 0.0 855.5143960978211 0.0 855.5143960978211 0.0 1.054266826574466 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 1.1773 + + 74 + 1 2.124 163988.9 0.6899999976158142 4518 3534 8046 DOHH2_400M_050219_1,8054 DOHH2_400M_050219_1,8054,SLSLLRVSW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8055 45.254 507.0 163750.0 25 0 19824.0 + 19274 LEKLRGTIY 9 106 546.822506916714 1091.630460900228 2 546.8226196169853 MULTI CID FTMS 0 0 0 8046 147883.765625 0.4489398645974409 -3 0.1663398742675781 9 Unmodified _LEKLRGTIY_ REV__ENSG00000103740|ENST00000258873|ACSBG1 3.944395688203298 0.7769873103969335 1 Y 1 -1 12.474 0.0 0.0 1.1427 0.0 0.0 910.5559960338202 0.0 910.5559960338202 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1427 + + 80 + 1 2.124 65589.9 1.0 4519 3534 8046 DOHH2_400M_050219_1,8055 DOHH2_400M_050219_1,8055,LEKLRGTIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8056 45.268 800.0 177100.0 25 0 39240.0 + 35583 STTLTLRKLSL 11 119 616.8823552399001 1231.7501575466 2 616.8829833865166 MULTI CID FTMS 0 0 0 8046 137040.46875 0.7012054405724394 3 -0.2181625366210937 10 Unmodified _STTLTLRKLSL_ REV__ENSG00000122591|ENST00000432176|HYCC1;REV__nc|ENSG00000122591|Q9BYI3-2|HYCC1 5.296884461304476 0.8501568894076437 1 RY 2 -1 15.815 0.0 0.0 1.284 0.0 0.0 894.574298026872 0.0 894.574298026872 0.0 4.9780134958937605 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 RY 1.284 - 63 + 1 2.124 107738.3 0.6600000262260437 4520 3534 8046 DOHH2_400M_050219_1,8056 DOHH2_400M_050219_1,8056,STTLTLRKLSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8057 45.282 800.0 154870.0 25 0 14640.0 + 29992 QTDQMVFNAY 10 142 608.7688263894628 1215.5230998457257 2 608.7686035037041 MULTI CID FTMS 0 0 0 8046 93507.359375 0.16239137539554 4 -0.3592529296875 11 Unmodified _QTDQMVFNAY_ ENSG00000147457|ENST00000397677|CHMP7;ENST00000517325.5_1_8:23104188-23118109:+|nuORF;ENST00000523091.5_1_8:23112705-23118098:+|nuORF 39.94969957227396 0.1580982266129622 1 [QA]{[QG]|[NA]}EVMYQY 10 6 + 39.729 0.0 0.0 3.2684 3.2684 69.358 0.0 0.0 0.0 19.34955642535896 5.501852725587817 5.501852725587817 1.2371250542002343 0 0.0 0.0 0.0 1.5114393726401687 [QA]{[QG]|[NA]}EVMYQY;[QA]{[QG]|[NA]}EVMQYY;[QA]{[QG]|[NA]}EVMYGAY;[QA]{[QG]|[NA]}EVM[SG]{M(Oxidation (M))|F}Y;[QA]{[QG]|[NA]}{M(Oxidation (M))|F}V{[MS]|[{M(Oxidation (M))|F}A]}DAY;[QA]{[QG]|[NA]}EVMYGS{M(Oxidation (M))|F};[QA]{[QG]|[NA]}EVM[AG]YY;[QA]{[QG]|[NA]}EVMQ[DG][PG];[QA]{[QG]|[NA]}{M(Oxidation (M))|F}V[{M(Oxidation (M))|F}E]QY;[QA]{[QG]|[NA]}{M(Oxidation (M))|F}V[{M(Oxidation (M))|F}E]GAY 3.2684;3.1667;1.9258;1.792;1.6429;1.6128;1.5187;1.3746;1.1592;0.71058 -;-;-;-;-;-;-;-;-;- 1040 + 1 2.124 93821.0 0.5699999928474426 4521 3534 8046 DOHH2_400M_050219_1,8057 DOHH2_400M_050219_1,8057,QTDQMVFNAY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8058 45.295 800.0 132150.0 25 0 9120.0 24363 MERLHKIKI 9 151 584.3565734711049 1166.6985940090096 2 584.3564330935478 MULTI CID FTMS 0 0 0 8046 92416.734375 0.8347132152542411 5 -0.4404983520507812 12 Unmodified _MERLHKIKI_ ENSG00000103657|ENST00000443617|HERC1 2.059750862983233 0.8427793054688888 1 Y 1 9 13.979 0.0 0.0 1.1982 0.0 0.0 985.6242054365472 0.0 985.6242054365472 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1982 - 277 + 1 2.124 82128.1 0.5400000214576721 4522 3534 8046 DOHH2_400M_050219_1,8058 DOHH2_400M_050219_1,8058,MERLHKIKI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8059 45.301 195.0 344200.0 25 0 39107.0 + -1 LEMILLLDQ 9 96 552.3062531840859 1102.5979534349715 2 552.3068115115166 MULTI CID FTMS 0 0 0 8046 165655.875 1.0 0 0.0 13 Oxidation (M) _LEM(Oxidation (M))ILLLDQ_ REV__ENSG00000132953|ENST00000255305|XPO4 10.073929032068715 0.563993802247229 1 {[QN]|[E{I|L}]|[KN]}K 3 -1 19.142 0.0 0.0 1.7361 0.0 0.0 0.0 729.3547479689787 729.3547479689787 6.043031117331953 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.0 0.0 {[QN]|[E{I|L}]|[KN]}K 1.7361 - 87 1 2.124 53331.9 1.0 4523 3534 8046 DOHH2_400M_050219_1,8059 DOHH2_400M_050219_1,8059,LEMILLLDQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8061 45.305 27.0 1847000.0 25 0 408890.0 30249 QWVRLLYR 8 65 567.3300135817798 1132.6454742303597 2 567.3301879763603 MULTI CID FTMS 0 0 0 8060 2136818.75 0.6268641862164577 4 -0.3475151062011719 1 Unmodified _QWVRLLYR_ ENSG00000142530|ENST00000600100|GARIN5A;nc|ENSG00000142530|Q6IPT2-2|GARIN5A 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.124 42494.2 1.0 4524 3535 8060 DOHH2_400M_050219_1,8061 DOHH2_400M_050219_1,8061,QWVRLLYR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8062 45.319 800.0 178690.0 25 0 30527.0 19261 LEKHRLVSRT 10 128 619.8692438564378 1237.7239347796756 2 619.8700439333916 MULTI CID FTMS 0 0 0 8060 211804.296875 0.4112526118404079 -3 0.2265510559082031 2 Unmodified _LEKHRLVSRT_ ENSG00000048052|ENST00000686413|HDAC9;ENST00000461159.6_1_7:18330122-18868840:+|nuORF;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0-4|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9 3.2813086475875832 0.7114585191678878 1 Y 1 10 11.42 0.0 0.0 0.92266 0.0 0.0 1056.6494699132677 0.0 1056.6494699132677 0.0 5.9354332167857216 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.92266 - 26 + 1 2.124 108009.0 0.5600000023841858 4525 3535 8060 DOHH2_400M_050219_1,8062 DOHH2_400M_050219_1,8062,LEKHRLVSRT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8064 45.324 71.0 803080.0 25 0 166670.0 + 12422 KGSGVVIIM 9 79 452.2702150301735 902.525877127147 2 452.2702209353447 MULTI CID FTMS 0 0 0 8063 744031.4375 0.3856582591491969 2 -0.2478599548339843 1 Unmodified _GTQLKLIM_ nc|ENSG00000133835|P51659-3|HSD17B4;nc|ENSG00000133835|P51659-2|HSD17B4;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;ENSG00000133835|ENST00000510025|HSD17B4 25.399314129420983 0.5099049743284904 1 {[QD]|[EN]|[WG]|[KD]|[RS]}GKV{I|L}{I|L}M 8 4 + 55.495 0.0 0.0 6.1488 6.1488 80.609 0.0 0.0 0.0 10.356668758921828 49.041068762089 10.356668758921828 2.218487496163561 0 0.9247425010840048 0.0 0.6861818737241735 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}GKV{I|L}{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}KGV{I|L}{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}GVK{I|L}{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}VGK{I|L}{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}GK{I|L}V{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}KG{I|L}V{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}VG{I|L}K{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}GV{I|L}K{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}V[KA]V{I|L}M 6.1488;5.903;5.8153;5.8153;5.1433;4.8975;4.7024;4.7024;3.3993 -;-;-;-;-;-;-;-;- 179 1 2.124 47241.6 1.0 4526 3536 8063 DOHH2_400M_050219_1,8064 DOHH2_400M_050219_1,8064,GTQLKLIM False False KGSGVVIIM 45.323701 452.270220935345 21945048.0 8063.0 nc|ENSG00000133835|P51659-3|HSD17B4;;nc|ENSG00000133835|P51659-2|HSD17B4;;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;;ENSG00000133835|ENST00000510025|HSD17B4 4.0917642911275225 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8065 45.328 255.0 232660.0 25 0 19901.0 + 6959 EEIDVDGKFI 10 103 582.7924883619659 1163.5704237907316 2 582.7921020388603 MULTI CID FTMS 0 0 0 8063 202801.046875 1.0 0 0.0 2 Unmodified _EEIDVDGKFI_ ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF 34.93206674587334 0.2110832994570416 1 EE{I|L}DVDGK{M(Oxidation (M))|F}{I|L} 10 0 + 64.203 0.0 0.0 5.5177 5.5177 89.68 0.0 0.0 0.0 38.01262208303508 7.355416498611717 7.355416498611717 19.43942552799512 0 0.5 1.6989700043360187 0.4247425010840047 0.0 + + EE{I|L}DVDGK{M(Oxidation (M))|F}{I|L};EE{I|L}DV[KP][TA]Y;EE{I|L}D[RD]K{M(Oxidation (M))|F}{I|L};EE{I|L}DV[{M(Oxidation (M))|F}V][WK];{NN|[MP]|[D{I|L}]|[EV]}P[RP]VD{I|L}[HC];EE{I|L}[{M(Oxidation (M))|F}V]VD[WK];EE{I|L}[{M(Oxidation (M))|F}V]V{M(Oxidation (M))|F}N[PA];[DP]{I|L}[RP]VD{I|L}[HC];EE{I|L}[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}VN[PA];[KG]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]VD{I|L}[HC] 5.5177;3.8471;3.6036;3.5167;2.9934;2.6966;2.6343;2.2754;2.2682;2.1006 +;-;-;-;-;-;-;-;-;- + 444 + 1 2.124 48447.9 1.0 4527 3536 8063 DOHH2_400M_050219_1,8065 DOHH2_400M_050219_1,8065,EEIDVDGKFI False True EEIDVDGKFI 45.328443 582.79210203886 910577.25 8063.0 ENST00000504788.5_1_5:126112928-126171953:+|nuORF;;ENSG00000113368|ENST00000261366|LMNB1 5.3571750322977705 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8066 45.338 555.0 397610.0 25 0 66422.0 + 31653 RRGDIIEVL 9 147 535.819543508328 1069.624534083456 2 535.8199340701103 MULTI CID FTMS 0 0 0 8063 217439.375 0.4952356224366991 -1 0.0184097290039062 3 Unmodified _RRGDIIEVL_ ENSG00000154016|ENST00000284154|GRAP 53.832793166522166 0.0319663582346103 1 {[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}EV{I|L} 9 3 + 73.566 0.0 0.0 6.8778 6.8778 80.077 0.0 0.0 0.0 0.4528949099545798 14.973024840566469 0.4528949099545798 0.4528949099545798 0 0.805462187404089 1.6989700043360187 0.0 2.110924374808178 {[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}EV{I|L};{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}EV{I|L};RR[DG]{I|L}{I|L}EV{I|L};{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}EV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[KQ]{I|L}EV{I|L};[{I|L}A]{[WN]|[YH]}{I|L}{I|L}EV{I|L};{I|L}{I|L}EE{I|L}{I|L}EV{I|L};{I|L}V{M(Oxidation (M))|F}{I|L}{I|L}[YR]{M(Oxidation (M))|F};{I|L}V{M(Oxidation (M))|F}{I|L}[NP][VG]V{I|L} 6.8778;6.8354;5.9573;5.5706;5.2462;4.8444;4.0654;4.0422;3.9599 -;-;+;-;-;-;-;-;- + 623 1 2.124 172415.3 1.0 4528 3536 8063 DOHH2_400M_050219_1,8066 DOHH2_400M_050219_1,8066,RRGDIIEVL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8067 45.343 257.0 288150.0 25 0 22351.0 + 33152 SEVPGSIPNSW 11 109 586.7829913913413 1171.5514298494825 2 586.7839843630791 MULTI CID FTMS 0 0 0 8063 160771.640625 0.2151031641246182 -3 0.2001533508300781 4 Unmodified _SEVPGSIPNSW_ ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-2|MLH1;nc|ENSG00000076242|P40692-3|MLH1 59.36838082759317 0.0717085717264091 1 {M(Oxidation (M))|F}{I|L}PNSW 6 6 41.222 0.0 0.0 3.5185 0.0 0.0 409.1671657887387 0.0 409.1671657887387 0.0 29.0030565586067 0.0 0.0 0 0.4247425010840047 0.0 0.9361818737241734 0.4247425010840047 {M(Oxidation (M))|F}{I|L}PNSW 3.5185 - 215 + 1 2.124 61008.5 1.0 4529 3536 8063 DOHH2_400M_050219_1,8067 DOHH2_400M_050219_1,8067,SEVPGSIPNSW True True SEVPGSIPNSW 45.342976 586.783984363079 28376217.0 8063.0 nc|ENSG00000076242|P40692-2|MLH1;;ENSG00000076242|ENST00000231790|MLH1;;nc|ENSG00000076242|P40692-3|MLH1 7.955006599426269 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8068 45.353 570.0 207820.0 25 0 34402.0 16350 IYNASVSLALY 11 99 607.3285633762187 1212.6425738192372 2 607.3292724490166 MULTI CID FTMS 0 0 0 8063 127048.4296875 1.0 0 0.0 5 Unmodified _IYNASVSLALY_ ENSG00000164855|ENST00000297477|TMEM184A;ENST00000468535.5_1_7:1586590-1589169:-|nuORF 11.494710602746466 0.7960433852372589 1 {I|L}[TP]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5 10 19.693 0.0 0.0 1.624 0.0 0.0 0.0 604.2976168268186 604.2976168268186 5.289608702767144 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}[TP]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.624 - 22 + 1 2.124 89070.4 1.0 4530 3536 8063 DOHH2_400M_050219_1,8068 DOHH2_400M_050219_1,8068,IYNASVSLALY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8069 45.359 340.0 410100.0 25 0 83590.0 19858 LHLPRLAP 8 103 458.7882241808673 915.5618954285346 2 458.7878906130791 MULTI CID FTMS 0 0 0 8063 121327.5078125 0.0593237490624278 -2 0.1113929748535156 6 Unmodified _LHLPRLAP_ ENST00000577083.1_1_16:4491378-4492529:+|nuORF 0.7936320650641473 0.8195151834710337 1 Y 1 8 11.42 0.0 0.0 1.2473 0.0 0.0 734.4873695269706 0.0 734.4873695269706 0.0 1.7422732279605937 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2473 - 17 + 1 2.124 113377.8 1.0 4531 3536 8063 DOHH2_400M_050219_1,8069 DOHH2_400M_050219_1,8069,LHLPRLAP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8070 45.369 574.0 256430.0 25 0 11198.0 + 29093 QENPFFRKL 9 161 393.5493358320609 1177.6261780963828 3 393.5488769412041 MULTI CID FTMS 0 0 0 8063 118628.078125 0.546955785910116 -1 0.0184097290039062 7 Unmodified _QENPFFRKL_ ENSG00000037474|ENST00000264670|NSUN2;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 13.90604991867851 0.4602628045680013 1 {I|L}{M(Oxidation (M))|F}P[HC]{I|L} 6 7 26.678 0.0 0.0 2.2654 0.0 0.0 449.2753163068375 0.0 449.2753163068375 0.0 17.528979464796794 0.0 0.0 0 0.1271595765414318 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}P[HC]{I|L} 2.2654 - 151 1 2.124 118609.5 1.0 4532 3536 8063 DOHH2_400M_050219_1,8070 DOHH2_400M_050219_1,8070,QENPFFRKL False True QENPFFRKL 45.369174 393.548876941204 2225430.1875 8063.0 ENST00000513888.5_1_5:6600041-6604993:-|nuORF;;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;;ENSG00000037474|ENST00000264670|NSUN2;;nc|ENSG00000037474|Q08J23-3|NSUN2;;nc|ENSG00000037474|Q08J23-2|NSUN2 5.46041472752889 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8071 45.383 800.0 208080.0 25 0 16420.0 + 29102 QEPKALVSEW 10 186 593.8075272039277 1185.6005014746554 2 593.8101074099541 MULTI CID FTMS 0 0 0 8063 94313.5546875 0.3464105984847632 -3 0.2001533508300781 8 Unmodified _QEPKALVSEW_ ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF 96.36657018975838 0.0088773658760237 1 VSEWAW 6 8 47.089 0.0 0.0 3.9717 0.0 0.0 409.2691822736344 0.0 409.2691822736344 0.0 17.231975075880328 0.0 0.0 0 0.4247425010840047 0.0 0.9476212463643424 0.0 VSEWAW 3.9717 - 1409 1 2.124 122814.4 0.5400000214576721 4533 3536 8063 DOHH2_400M_050219_1,8071 DOHH2_400M_050219_1,8071,QEPKALVSEW True True QEPKALVSEW 45.383003 593.810107409954 3465445.5 8063.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000414411.3_1_11:61081295-61081943:-|nuORF 5.80223290125529 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8072 45.397 800.0 118900.0 25 0 7990.7 19222 LEGSGTIIA 9 106 860.4728724470103 859.4655959804103 1 860.4739868044853 MULTI CID FTMS 0 0 0 8063 114934.6796875 0.2243296781784324 4 -0.4681739807128906 9 Unmodified _LEGSGTIIA_ ENST00000601033.1_1_19:46531262-46531590:+|nuORF 64.23631603340823 0.0237365939569086 1 [{I|L}T]GSAD{I|L}A{I|L} 9 5 + 63.875 0.0 0.0 7.432 7.432 89.928 0.0 0.0 0.0 9.63899138491874 22.45597037666072 9.63899138491874 8.450528104279016 0 0.6747425010840047 0.0 3.06295299324845 0.0 [{I|L}T]GSAD{I|L}A{I|L};[{I|L}T]GSADA{I|L}{I|L};[{I|L}T]GSGE{I|L}A{I|L};[{I|L}T]GASD{I|L}A{I|L};[{I|L}T]GSA{I|L}DA{I|L};[{I|L}T]QSD{I|L}A{I|L};{[QN]|[E{I|L}]|[KN]}GA{[CA]|SS}{I|L}A{I|L};{[QN]|[E{I|L}]|[KN]}GS{[SA]|[TG]}{I|L}A{I|L};[{I|L}T]GSGEA{I|L}{I|L};[{I|L}T]GASDA{I|L}{I|L} 7.432;6.4488;6.3294;6.2951;5.8589;5.6899;5.5214;5.5153;5.3462;5.3119 -;-;-;-;-;-;-;-;-;- 1134 1 2.124 69049.5 0.6200000047683716 4534 3536 8063 DOHH2_400M_050219_1,8072 DOHH2_400M_050219_1,8072,LEGSGTIIA True True GEISGTIAI 45.396853 860.473986804485 3583930.75 8063.0 ENST00000514482.1_1_4:190862182-190882061:+|nuORF;;ENSG00000109536|ENST00000226798|FRG1 0.5524097084999084 1.0 False 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8073 45.412 800.0 95295.0 25 0 42110.0 + 4272 DAQKSSKFD 9 53 1025.4890432098407 1024.4817667432408 1 1025.491015613079 MULTI CID FTMS 0 0 0 8063 106173.1328125 0.6098741995664245 5 -0.5556373596191406 10 Unmodified _DAQKSSKFD_ REV__ENSG00000169258|ENST00000303991|GPRIN1;REV__nc|ENSG00000169258|Q7Z2K8-2|GPRIN1 3.5964929083625545 0.7891324200061827 1 W{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G 4 -1 11.427 0.0 0.0 1.1154 0.0 0.0 0.0 544.2786959283811 544.2786959283811 5.942124970647029 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G 1.1154 - 14 + 1 2.124 57859.3 0.5799999833106995 4535 3536 8063 DOHH2_400M_050219_1,8073 DOHH2_400M_050219_1,8073,DAQKSSKFD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8074 45.426 800.0 147100.0 25 0 9070.8 -1 0 126 1006.4763981958528 0 1006.474902331829 PEAK CID FTMS 0 0 0 8063 108149.2578125 0.6397274725258475 -1 0.0184097290039062 11 1 TT{I|L} 3 -1 7.7917 0.0 0.0 0.38746 0.0 0.0 984.4137816438551 708.3316134088499 1692.7453950527051 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TT{I|L} 0.38746 - 320 + 1 2.124 79335.2 0.5799999833106995 4536 3536 8063 DOHH2_400M_050219_1,8074 DOHH2_400M_050219_1,8074, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8076 45.431 71.0 788860.0 25 0 115040.0 + 39690 FSEIDLEKY 9 89 572.2872084896657 1142.5598640461312 2 572.2825805544853 MULTI CID FTMS 0 0 0 8075 811789.875 0.0592941422018063 9 -0.9000701904296875 1 Unmodified _VEESNKFYK_ ENSG00000178700|ENST00000314636|DHFR2 32.30548876998284 0.1201446275138228 1 {M(Oxidation (M))|F}SE{I|L}D{I|L}EKY 9 8 + 75.455 0.0 0.0 6.6041 6.6041 93.14 0.0 0.0 0.0 43.27623146104628 14.09256854528806 14.09256854528806 19.062959475437744 0 0.0 0.0 0.3807196863200844 0.3054621874040891 {M(Oxidation (M))|F}SE{I|L}D{I|L}EKY;{M(Oxidation (M))|F}SE{I|L}D{I|L}VSAY;{[TV]|[{I|L}S]}[HT]{I|L}D{I|L}ESE;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WK][HA]ESE 6.6041;4.9356;3.8897;2.0101 -;-;-;- 176 + 1 2.124 46728.6 1.0 4537 3537 8075 DOHH2_400M_050219_1,8076 DOHH2_400M_050219_1,8076,VEESNKFYK True False FSEIDLEKY 45.430745 572.282580554485 7238956.5 8075.0 ENSG00000178700|ENST00000314636|DHFR2 7.701903661092122 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8077 45.433 81.0 709530.0 25 0 43747.0 + 11200 GENLPPLTY 9 100 502.2585408742066 1002.5025288152132 2 502.2587463259697 MULTI CID FTMS 0 0 0 8075 457180.9375 0.4240387081305763 4 -0.4488677978515625 2 Unmodified _GENLPPLTY_ ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1 63.960520009940105 0.0238892913700936 1 {[DA]|[EG]}N{I|L}PP{I|L}TY 9 0 + 41.894 0.0 0.0 4.1789 4.1789 79.715 0.0 0.0 0.0 3.904332026475004 17.240466404352333 3.904332026475004 8.542578821468396 0 1.742992819099939 1.154901959985743 0.2614393726401688 0.0 + + {[DA]|[EG]}N{I|L}PP{I|L}TY;[Y{M(Oxidation (M))|F}]{[TV]|[{I|L}S]}PT{I|L}Y;{[DA]|[EG]}GG{I|L}PP{I|L}TY;[Y{M(Oxidation (M))|F}]{[TV]|[{I|L}S]}P{I|L}TY;[YT][{M(Oxidation (M))|F}V]P{I|L}TY;[{I|L}P]P{[QG]|[NA]}D{I|L}TY;[{I|L}P]G[QP]D{I|L}TY;{[HG]|PP}{I|L}{[QG]|[NA]}D{I|L}TY;[{I|L}P]GQP{[TV]|[{I|L}S]}EY;[PA]V[QP]D{I|L}TY 4.1789;3.3268;3.2604;2.8306;1.2242;0.9296;0.83293;0.42571;0.28265;0.21124 +;-;-;-;-;-;-;-;-;- + 235 1 2.124 49754.1 1.0 4538 3537 8075 DOHH2_400M_050219_1,8077 DOHH2_400M_050219_1,8077,GENLPPLTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8078 45.434 57.0 1741000.0 25 0 114250.0 -1 0 92 766.369451872036 2296.086526216308 3 766.7043334841728 MULTI CID FTMS 0 0 0 8075 1868820.375 0.243503458368112 -1 0.1067695617675781 3 1 GMTGYGM 7 -1 51.815 0.0 0.0 2.2567 0.0 0.0 973.4436924835728 622.3694986181836 1595.8131911017565 0.0 0.0 0.0 0.0 0 1.610924374808178 0.0 0.0 0.0 GMTGYGM 2.2567 - 3378 + 1 2.124 77694.8 1.0 4539 3537 8075 DOHH2_400M_050219_1,8078 DOHH2_400M_050219_1,8078, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8079 45.436 82.0 807380.0 25 0 130210.0 39808 VETALINQR 9 73 522.2956761450827 1042.5767993569652 2 522.2957031130791 MULTI CID FTMS 0 0 0 8075 727752.25 1.0 0 0.0 4 Unmodified _VETALINQR_ ENSG00000110046|ENST00000377264|ATG2A;nc|ENSG00000110046|Q2TAZ0-3|ATG2A 4.3292370932331545 0.7635526921153418 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.124 56142.9 1.0 4540 3537 8075 DOHH2_400M_050219_1,8079 DOHH2_400M_050219_1,8079,VETALINQR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8080 45.439 127.0 605260.0 25 0 44961.0 + 5396 DLKTKVLVL 9 101 514.8392743120719 1027.6639956909437 2 514.8394653201103 MULTI CID FTMS 0 0 0 8075 624102.625 0.8439254164949979 -1 0.1067695617675781 5 Unmodified _DLKTKVLVL_ ENSG00000180104|ENST00000512944|EXOC3 42.312485326615175 0.0627620958981271 1 {NN|[MP]|[D{I|L}]|[EV]}KTKV{I|L}V{I|L} 9 0 + 46.34 0.0 0.0 4.5092 4.5092 73.571 0.0 0.0 0.0 1.4524249272868417 2.042965585096823 1.4524249272868417 1.4524249272868417 0 1.579689690656103 2.0 0.3252574989159953 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}KTKV{I|L}V{I|L};{[TV]|[{I|L}S]}K{I|L}KVEV{I|L};[{I|L}V][KT]KVEV{I|L};{[TV]|[{I|L}S]}K{I|L}KD{I|L}V{I|L};{[TV]|[{I|L}S]}K{I|L}VKEV{I|L};[{I|L}V][KT]KD{I|L}V{I|L};[{I|L}V][KT]VKEV{I|L};[K{I|L}]S{I|L}KVEV{I|L};[K{I|L}]S{I|L}KD{I|L}V{I|L};[K{I|L}]S{I|L}VKEV{I|L} 4.5092;4.3679;4.3181;4.0986;4.075;4.0488;4.0252;3.8621;3.5927;3.5691 +;-;-;-;-;-;-;-;-;- + 1030 1 2.124 63945.4 1.0 4541 3537 8075 DOHH2_400M_050219_1,8080 DOHH2_400M_050219_1,8080,DLKTKVLVL True True DLKTKVLVL 45.438503 514.83946532011 4888414.5 8075.0 ENSG00000180104|ENST00000512944|EXOC3 4.477954864501953 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8081 45.441 95.0 737940.0 25 0 67656.0 + 449 AEFPDEPKW 9 71 559.7613757525963 1117.5081985719926 2 559.7615844607353 MULTI CID FTMS 0 0 0 8075 513158.25 1.0 0 0.0 6 Unmodified _AEFPDEPKW_ ENSG00000085377|ENST00000652536|PREP 36.506200033944 0.094635877243972 1 {[CP]|[EA]}{M(Oxidation (M))|F}PDEPKW 9 0 + 58.126 0.0 0.0 5.2014 5.2014 89.326 0.0 0.0 0.0 41.17136471931396 3.9524249272868417 3.9524249272868417 27.76925019195367 0 0.8807196863200843 0.0 0.4247425010840047 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}PDEPKW;{[CP]|[EA]}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}K{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}W;{[CP]|[EA]}{M(Oxidation (M))|F}GK{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}W;{[CP]|[EA]}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}K{[YC]|[HE]}[PG];{[CP]|[EA]}{M(Oxidation (M))|F}GK{M(Oxidation (M))|F}{[YC]|[HE]}[PG];{[CP]|[EA]}{M(Oxidation (M))|F}{[ET]|[MV]}[HA]KW 5.2014;2.7165;2.6047;2.477;2.3652;1.7349 +;-;-;-;-;- + 360 + 1 2.124 56409.0 1.0 4542 3537 8075 DOHH2_400M_050219_1,8081 DOHH2_400M_050219_1,8081,AEFPDEPKW True True AEFPDEPKW 45.440588 559.761584460735 5017678.5 8075.0 ENSG00000085377|ENST00000652536|PREP 8.891399701436361 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8082 45.443 123.0 386920.0 25 0 73275.0 + 39478 VARKEDKEL 9 68 544.3088817440029 1086.6032105548056 2 544.3091918826103 MULTI CID FTMS 0 0 0 8075 361849.9375 0.3127227561263336 7 -0.7521705627441406 7 Unmodified _VARKEDKEL_ REV__ENSG00000164603|ENST00000297145|BMT2 3.5964929083625545 0.7891324200061827 1 Y 1 -1 11.99 0.0 0.0 1.1034 0.0 0.0 905.5283337010932 0.0 905.5283337010932 0.0 7.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1034 - 13 + 1 2.124 42511.5 1.0 4543 3537 8075 DOHH2_400M_050219_1,8082 DOHH2_400M_050219_1,8082,VARKEDKEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8083 45.448 239.0 339740.0 25 0 119500.0 -1 MVLLRVLI 8 76 499.82700805895 997.6394631847 2 499.8271057009697 MULTI CID FTMS 0 0 0 8075 351312.125 0.8886512193593057 -1 0.1067695617675781 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MVLLRVLI_ ENSG00000137845|ENST00000260408|ADAM10;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF;nc|ENSG00000137845|O14672-2|ADAM10 2.889219685676258 0.8067950007271085 1 {I|L} 1 -1 12.764 0.0 0.0 1.2794 0.0 0.0 866.544170071222 0.0 866.544170071222 0.0 0.7745097999287154 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2794 + + 8 + 1 2.124 67994.6 1.0 4544 3537 8075 DOHH2_400M_050219_1,8083 DOHH2_400M_050219_1,8083,MVLLRVLI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8084 45.461 756.0 391180.0 25 0 28945.0 8357 ESAWGDEED 9 216 519.1883028668587 1036.3620528005174 2 519.1890746951103 MULTI CID FTMS 0 0 0 8075 326084.96875 1.0 0 0.0 9 Unmodified _ESAWGDEED_ ENSG00000129946|ENST00000264554|SHC2 21.74664581756881 0.2544899275067181 1 {[ES]|[DT]|[{I|L}C]}AGTG{M(Oxidation (M))|F}{M(Oxidation (M))|F} 8 5 35.07 0.0 0.0 3.384 0.0 0.0 0.0 237.0018099420532 237.0018099420532 11.82633152286185 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.805462187404089 0.0 {[ES]|[DT]|[{I|L}C]}AGTG{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3.384 - 962 + 1 2.124 219184.4 1.0 4545 3537 8075 DOHH2_400M_050219_1,8084 DOHH2_400M_050219_1,8084,ESAWGDEED False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8085 45.464 172.0 355800.0 25 0 43412.0 + 32965 SELSSIQNL 9 104 495.7578296342662 989.5011063353325 2 495.7588683962822 MULTI CID FTMS 0 0 0 8075 317319.09375 1.0 0 0.0 10 Unmodified _SELSSIQNL_ ENSG00000112159|ENST00000369393|MDN1 50.855029805455786 0.0384952370514206 1 {NN|[MP]|[D{I|L}]|[EV]}QE{I|L} 5 6 37.852 0.0 0.0 3.8253 0.0 0.0 0.0 388.1796091031637 388.1796091031637 17.63243134733452 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.25 0.5941876774005248 {NN|[MP]|[D{I|L}]|[EV]}QE{I|L} 3.8253 - 307 1 2.124 50690.9 1.0 4546 3537 8075 DOHH2_400M_050219_1,8085 DOHH2_400M_050219_1,8085,SELSSIQNL True True SELSSIQNL 45.464044 495.758868396282 1965998.0 8075.0 ENSG00000112159|ENST00000369393|MDN1 4.603901545206706 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8086 45.471 371.0 286620.0 25 0 44420.0 8281 EQLKFLRML 9 125 589.3433184242272 1176.6720839152542 2 589.3437988162041 MULTI CID FTMS 0 0 0 8075 240897.09375 0.0734318442756687 -5 0.3517303466796875 11 Unmodified _EQLKFLRML_ ENST00000400183.6_1_21:17177512-17181137:+|nuORF 7.289230182591677 0.6602208344931196 1 [KQ]NP{M(Oxidation (M))|F} 5 6 19.833 0.0 0.0 1.6855 0.0 0.0 0.0 559.3342989557249 559.3342989557249 8.573821357596252 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [KQ]NP{M(Oxidation (M))|F} 1.6855 - 129 + 1 2.124 84070.5 1.0 4547 3537 8075 DOHH2_400M_050219_1,8086 DOHH2_400M_050219_1,8086,EQLKFLRML False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8087 45.475 208.0 451420.0 25 0 26705.0 + 38459 TSDELQFGY 9 128 530.2355143027778 1058.4564756723555 2 530.2356445193291 MULTI CID FTMS 0 0 0 8075 242457.203125 1.0 0 0.0 12 Unmodified _TSDELQFGY_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 57.47134341890925 0.0274820932774257 1 {[MG]|[TS]}DE{I|L}Q{M(Oxidation (M))|F}GY 9 0 {[MG]|[TS]}DE{I|L}Q + + 28.188 24.918 3.7009 2.6631 2.6631 49.732 0.0 0.0 0.0 0.0 3.2693812564239195 0.0 0.0 0 0.5 0.0 0.0 0.0 + + {[MG]|[TS]}DE{I|L}Q{M(Oxidation (M))|F}GY 2.6631 + + 224 + 1 2.124 74193.0 1.0 4548 3537 8075 DOHH2_400M_050219_1,8087 DOHH2_400M_050219_1,8087,TSDELQFGY True True TSDELQFGY 45.47468 530.235644519329 1660407.25 8075.0 nc|ENSG00000151348|Q93063-3|EXT2;;ENSG00000151348|ENST00000533608|EXT2;;nc|ENSG00000151348|Q93063-2|EXT2;;ENST00000528159.1_1_11:44228449-44265767:+|nuORF 4.189330657323201 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8088 45.489 800.0 215920.0 25 0 16683.0 + -1 NLDAVHDITVAY 12 145 665.3327392817588 1328.6509256303175 2 665.8354369997978 MULTI CID FTMS 0 0 0 8075 193388.9375 0.9113854217559916 -5 0.3517303466796875 13 Oxidation (M) _VQSHLDVRM(Oxidation (M))TQ_ nc|ENSG00000172954|Q6UWP7|LCLAT1;ENSG00000172954|ENST00000379509|LCLAT1 24.99096001346401 0.505407273373304 1 {[QV]|[N{I|L}]|[RA]|[KV]}DAVHD{I|L}TVA 11 -1 66.549 0.0 0.0 5.0088 0.0 0.0 0.0 177.04460997014817 177.04460997014817 14.29180193941498 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.2887254899964358 0.7803695511246984 {[QV]|[N{I|L}]|[RA]|[KV]}DAVHD{I|L}TVA 5.0088 - 15293 1 2.124 128489.6 0.8100000023841858 4549 3537 8075 DOHH2_400M_050219_1,8088 DOHH2_400M_050219_1,8088,VQSHLDVRMTQ False False NLDAVHDITVAY 45.488517 665.835436999798 1068614.625 8075.0 nc|ENSG00000172954|Q6UWP7|LCLAT1;;ENSG00000172954|ENST00000379509|LCLAT1 7.252563158671061 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8089 45.493 268.0 414420.0 25 0 76875.0 + 32950 SELNPNAEVW 10 122 579.7748761071952 1157.5351992811902 2 579.7751953005791 MULTI CID FTMS 0 0 0 8075 123539.46875 0.1410026766969147 -1 0.1067695617675781 14 Unmodified _SELNPNAEVW_ ENSG00000107929|ENST00000316157|LARP4B 51.41523569358685 0.0718446036348414 1 [NP]AEVNTEVW 10 6 + 89.156 0.0 0.0 7.7022 7.7022 85.324 0.0 0.0 0.0 12.52725316089426 9.164539485499247 9.164539485499247 3.0102999566398125 0 0.9247425010840048 0.721246399047171 0.5752574989159953 1.579689690656103 [NP]AEVNTEVW;[NP]AEVQSEVW;[NP]AENVTEVW;[NP]AEN{I|L}SEVW;[NP]AEVGGTEVW;[NP]AEV[SG]AEVW;[NP]AEV[AG]SEVW;{[QG]|[NA]}PEVNTEVW;[NP]AEGGVTEVW;{[QG]|[NA]}PEVQSEVW 7.7022;7.4421;7.1881;6.9281;6.9105;6.7584;6.6504;6.62;6.3964;6.3599 -;-;-;-;-;-;-;-;-;- 2951 1 2.124 86458.0 1.0 4550 3537 8075 DOHH2_400M_050219_1,8089 DOHH2_400M_050219_1,8089,SELNPNAEVW True True SELNPNAEVW 45.493478 579.775195300579 4881911.5 8075.0 ENSG00000107929|ENST00000316157|LARP4B 6.525474230448405 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8090 45.505 614.0 195660.0 25 0 15897.0 + 25053 MPTVHYEF 8 144 512.2338517792809 1022.453150625362 2 512.2346069216728 MULTI CID FTMS 0 0 0 8075 107229.796875 0.607007319955782 -1 0.1067695617675781 15 Unmodified _MPTVHYEF_ ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A 23.1484247019978 0.5573009939494978 1 MPTVC(Carbamidomethyl (C))PRY 8 4 + 56.885 0.0 0.0 5.5635 5.5635 79.567 0.0 0.0 0.0 18.46314753211658 13.399480616943508 13.399480616943508 3.0102999566398125 0 0.1861818737241735 1.3979400086720375 0.0 0.0 MPTVC(Carbamidomethyl (C))PRY;MPTQMPRY;MPTV[CG]PRY;MPT[AG]MPRY;MPTV[MN][PS]{M(Oxidation (M))|F};MPTV[MN][PA]Y;MPTN{[ET]|[MV]}[PS]{M(Oxidation (M))|F};MPTN{[ET]|[MV]}[PA]Y;MPTNYP{[MG]|[TS]}{I|L};MPTV[MN]{[MS]|[{M(Oxidation (M))|F}A]}{I|L} 5.5635;5.2691;4.6577;4.3632;2.996;2.996;2.6068;2.6068;2.3635;2.3342 -;-;-;-;-;-;-;-;-;- 781 + 1 2.124 97223.5 1.0 4551 3537 8075 DOHH2_400M_050219_1,8090 DOHH2_400M_050219_1,8090,MPTVHYEF False True MPTVHYEF 45.505382 512.234606921673 1248866.375 8075.0 ENSG00000136518|ENST00000429709|ACTL6A;;nc|ENSG00000136518|O96019-2|ACTL6A 2.922252655029297 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8091 45.519 800.0 341430.0 25 0 42092.0 + 18291 KVKTKQRK 8 184 508.3400080708174 0 508.3503906130791 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _KVKTKQRK_ REV__ENSG00000058272|ENST00000450142|PPP1R12A;REV__nc|ENSG00000058272|O14974-2|PPP1R12A;REV__nc|ENSG00000058272|O14974-3|PPP1R12A;REV__nc|ENSG00000058272|O14974-4|PPP1R12A 2.577480529830294 0.5910327097116076 1 VVVQ 4 -1 13.822 0.0 0.0 1.3622 0.0 0.0 507.3202996435939 79.0561998956664 586.3764995392603 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VVVQ 1.3622 - 59 + 1 2.124 207788.6 0.7699999809265137 4552 3537 8075 DOHH2_400M_050219_1,8091 DOHH2_400M_050219_1,8091,KVKTKQRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8092 45.533 800.0 1092700.0 25 0 388750.0 -1 0 77 1149.0502284845418 2296.085904035884 2 1149.555346667767 MULTI CID FTMS 0 0 0 8075 175479.9375 0.2498484097484055 -1 0.1067695617675781 17 1 AMGYGM{[SA]|[TG]}AQSQ 12 -1 69.99 0.0 0.0 3.0482 0.0 0.0 554.3219402681087 556.2324694925895 1110.5544097606985 0.0 0.0 0.0 0.0 0 3.360924374808178 0.0 0.0 0.3807196863200844 AMGYGM{[SA]|[TG]}AQSQ 3.0482 - 562 + 1 2.124 524558.6 0.5699999928474426 4553 3537 8075 DOHH2_400M_050219_1,8092 DOHH2_400M_050219_1,8092, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8093 45.539 282.0 823960.0 25 0 81742.0 + -1 AEFDAVVGY 9 129 969.766311168358 2906.277104105274 3 970.0997802615166 MULTI CID FTMS 0 0 0 8075 169491.234375 0.2168429432962359 -1 0.1067695617675781 18 ENSG00000102931|ENST00000219204|ARL2BP;nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP 1 AGMTGYGMP 9 -1 38.365 0.0 0.0 1.3201 0.0 0.0 1512.5982233453112 525.3166597955686 2037.91488314088 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AGMTGYGMP 1.3201 - 3699 + 1 2.124 152291.1 1.0 4554 3537 8075 DOHH2_400M_050219_1,8093 DOHH2_400M_050219_1,8093, False False AEFDAVVGY 45.539444 970.099780261517 181728.8125 8075.0 ENSG00000102931|ENST00000219204|ARL2BP;;nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP 0.5236611763636271 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8094 45.553 800.0 165720.0 25 0 21515.0 + 31744 RRVWRFFK 8 157 597.856461703229 1193.698370473258 2 597.8565551638603 MULTI CID FTMS 0 0 0 8075 154679.078125 0.1497992278412937 -5 0.3517303466796875 19 Unmodified _RRVWRFFK_ REV__ENSG00000185955|ENST00000332375|SPACDR 4.75600775471527 0.7954636275367004 1 Y 1 -1 13.099 0.0 0.0 1.0973 0.0 0.0 1012.6241497474751 0.0 1012.6241497474751 0.0 3.701813447471221 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0973 - 96 + 1 2.124 100708.9 0.75 4555 3537 8075 DOHH2_400M_050219_1,8094 DOHH2_400M_050219_1,8094,RRVWRFFK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8095 45.567 800.0 90502.0 25 0 25298.0 -1 0 75 918.385208963886 1834.755864994572 2 918.385791003704 MULTI CID FTMS 0 0 0 8075 125802.046875 1.0 0 0.0 20 1 Y 1 -1 15.485 0.0 0.0 0.84396 0.0 0.0 1653.68114072875 0.0 1653.68114072875 0.0 0.6588467082730141 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.84396 - 39 + 1 2.124 54736.3 0.6600000262260437 4556 3537 8075 DOHH2_400M_050219_1,8095 DOHH2_400M_050219_1,8095, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8097 45.572 32.0 1979600.0 25 0 307090.0 + 23628 LTQEKEEWY 9 70 613.2902465916912 1224.5659402501824 2 613.2900268435478 MULTI CID FTMS 0 0 0 8096 325991.9375 0.1844990440548346 1 -0.0812454223632812 1 Unmodified _LTQEKEEWY_ REV__ENSG00000141527|ENST00000648509|CARD14;REV__ENST00000571861.5_1_17:78162196-78169468:+|nuORF;REV__nc|ENSG00000141527|Q9BXL6-2|CARD14;REV__nc|ENSG00000141527|Q9BXL6-3|CARD14 4.75600775471527 0.7486543447549536 1 Y 1 -1 15.485 0.0 0.0 1.2645 0.0 0.0 1043.4913990898292 0.0 1043.4913990898292 0.0 2.2969624387961574 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2645 + + 10 + 1 2.101 51921.7 1.0 4557 3538 8096 DOHH2_400M_050219_1,8097 DOHH2_400M_050219_1,8097,LTQEKEEWY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8098 45.574 101.0 326790.0 25 0 20462.0 + 4820 DEVERVITI 9 79 537.2955196191708 1072.5764863051415 2 537.2960082888603 MULTI CID FTMS 0 0 0 8096 255153.703125 0.1170981346948614 2 -0.2203140258789062 2 Unmodified _DEVERVITI_ ENSG00000231500|ENST00000439602|RPS18;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 37.07464296494664 0.0915153923251136 1 V{I|L}T{I|L} 4 5 35.662 0.0 0.0 3.3249 0.0 0.0 628.2823353498062 0.0 628.2823353498062 0.0 17.474250108400465 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + V{I|L}T{I|L} 3.3249 + + 46 1 2.101 33698.1 1.0 4558 3538 8096 DOHH2_400M_050219_1,8098 DOHH2_400M_050219_1,8098,DEVERVITI True True DEVERVITI 45.573867 537.29600828886 24036366.0 8096.0 ENST00000496813.5_1_6:33239896-33244045:+|nuORF;;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;;ENSG00000231500|ENST00000439602|RPS18 7.730372428894043 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8099 45.575 64.0 1019300.0 25 0 133150.0 + 43922 YGGRGADY 8 96 429.69040236237146 857.3662517915429 2 429.6905700564384 MULTI CID FTMS 0 0 0 8096 1034875.5 1.0 0 0.0 3 Unmodified _YGGRGADY_ REV__ENSG00000114503|ENST00000321256|NCBP2;REV__ENST00000463783.1_1_3:196663884-196664019:-|nuORF;REV__ENST00000467803.1_1_3:196662357-196664019:-|nuORF;REV__nc|ENSG00000114503|P52298-2|NCBP2;REV__nc|ENSG00000114503|P52298-3|NCBP2 5.760428011301431 0.7893668129297577 1 DY 2 -1 18.188 0.0 0.0 2.1213 0.0 0.0 561.2642753284555 0.0 561.2642753284555 0.0 3.8907562519182193 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 DY 2.1213 + + 50 + 1 2.101 55150.6 1.0 4559 3538 8096 DOHH2_400M_050219_1,8099 DOHH2_400M_050219_1,8099,YGGRGADY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8100 45.577 60.0 719110.0 25 0 100250.0 + 8477 ETDEKDFYLY 10 77 661.7931696010072 1321.5717862688143 2 661.7932617068291 MULTI CID FTMS 0 0 0 8096 829778.125 0.5413942116660544 -1 0.1410903930664062 4 Unmodified _ETDEKDFYLY_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 32.78568957990786 0.2337485590374503 1 D{M(Oxidation (M))|F}Y{I|L}Y 5 5 35.362 0.0 0.0 2.6757 0.0 0.0 602.2475453107437 0.0 602.2475453107437 0.0 9.274852466137132 0.0 0.0 0 0.8182503180159344 0.0 1.424742501084005 0.0 + D{M(Oxidation (M))|F}Y{I|L}Y 2.6757 + + 209 1 2.101 38005.6 1.0 4560 3538 8096 DOHH2_400M_050219_1,8100 DOHH2_400M_050219_1,8100,ETDEKDFYLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8101 45.579 125.0 475570.0 25 0 65397.0 + 26395 NTDNLLTEY 9 91 541.7537252556484 1081.4928975780967 2 541.7539550662041 MULTI CID FTMS 0 0 0 8096 412486.5625 1.0 0 0.0 5 Unmodified _NTDNLLTEY_ ENSG00000164151|ENST00000296564|ICE1;ENST00000505464.1_1_5:5423001-5437265:+|nuORF;ICE1|p.Y725Lfs*4|1|0.29|ENSG00000164151|chr5:5461508-5461508|A/-|frameshift_variant 21.53697664764585 0.2571576504437394 1 {[QS]|[NT]}[DN]{I|L}{I|L} 6 3 16.614 0.0 0.0 1.5362 0.0 0.0 0.0 408.1398451701468 408.1398451701468 1.1292326232323049 0.0 0.0 0.0 0 0.3494850021680094 0.7695510786217261 0.0 0.6549471895720984 + {[QS]|[NT]}[DN]{I|L}{I|L} 1.5362 + + 226 1 2.101 48783.9 1.0 4561 3538 8096 DOHH2_400M_050219_1,8101 DOHH2_400M_050219_1,8101,NTDNLLTEY False True NTDNLLTEY 45.579494 541.753955066204 2333563.0 8096.0 ENSG00000164151|ENST00000296564|ICE1;;ENST00000505464.1_1_5:5423001-5437265:+|nuORF;;ICE1|p.Y725Lfs*4|1|0.29|ENSG00000164151|chr5:5461508-5461508|A/-|frameshift_variant 2.362466335296631 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8102 45.582 137.0 346410.0 25 0 63169.0 23904 LVMPVHAQKK 10 79 575.8430402078582 1149.6715274825162 2 575.8434326052666 MULTI CID FTMS 0 0 0 8096 396399.71875 0.3541042263293964 7 -0.6650161743164062 6 Unmodified _LVMPVHAQKK_ ENSG00000205108|ENST00000378788|FAM205A 1.844237919475145 0.7181058121064529 1 K 1 9 2.4743 0.0 0.0 0.21521 0.0 0.0 779.4527593038556 239.09343897037343 1018.546198274229 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.21521 + + 3 + 1 2.101 44638.0 1.0 4562 3538 8096 DOHH2_400M_050219_1,8102 DOHH2_400M_050219_1,8102,LVMPVHAQKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8103 45.585 133.0 788310.0 25 0 93972.0 + 24599 MLKRVFVL 8 122 503.31735731068005 1004.62016168816 2 503.3177062869072 MULTI CID FTMS 0 0 0 8096 326827.1875 0.12784382894839 -2 0.2478599548339843 7 Unmodified _MLKRVFVL_ REV__ENSG00000033867|ENST00000454389|SLC4A7;REV__ENSG00000144290|ENST00000446997|SLC4A10;REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF;REV__ENST00000465487.5_1_3:27418257-27433320:-|nuORF;REV__nc|ENSG00000033867|Q9Y6M7-12|SLC4A7;REV__nc|ENSG00000033867|Q9Y6M7-13|SLC4A7;REV__nc|ENSG00000033867|Q9Y6M7-2|SLC4A7;REV__nc|ENSG00000033867|Q9Y6M7-3|SLC4A7;REV__nc|ENSG00000033867|Q9Y6M7-4|SLC4A7;REV__nc|ENSG00000033867|Q9Y6M7-5|SLC4A7;REV__nc|ENSG00000033867|Q9Y6M7-6|SLC4A7;REV__nc|ENSG00000033867|Q9Y6M7-8|SLC4A7;REV__nc|ENSG00000033867|Q9Y6M7-9|SLC4A7;REV__nc|ENSG00000033867|Q9Y6M7|SLC4A7;REV__nc|ENSG00000144290|Q6U841-2|SLC4A10;REV__nc|ENSG00000144290|Q6U841-3|SLC4A10 28.17323086031832 0.4514957916281387 1 M{I|L}{M(Oxidation (M))|F}KK 5 -1 58.954 0.0 0.0 5.8683 0.0 0.0 0.0 354.2224520318969 354.2224520318969 45.85470640367888 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3252574989159953 M{I|L}{M(Oxidation (M))|F}KK 5.8683 - 132 + 1 2.101 85206.7 1.0 4563 3538 8096 DOHH2_400M_050219_1,8103 DOHH2_400M_050219_1,8103,MLKRVFVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8104 45.591 324.0 325630.0 25 0 35399.0 -1 0 135 435.2510155795331 434.2437391129331 1 435.2515441775322 MULTI CID FTMS 0 0 0 8096 214446.578125 0.539925408158697 -1 0.1410903930664062 8 1 {I|L} 1 -1 8.9258 0.0 0.0 2.0555 0.0 0.0 303.1485222934003 0.0 303.1485222934003 0.0 0.4309307380814164 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.0555 - 6 + 1 2.101 86898.1 1.0 4564 3538 8096 DOHH2_400M_050219_1,8104 DOHH2_400M_050219_1,8104, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8105 45.596 298.0 166220.0 25 0 14451.0 + 42916 VVQMLFLKW 9 87 582.33515182217 1162.65575071114 2 582.3352538943291 MULTI CID FTMS 0 0 0 8096 210682.59375 0.2180995741233289 -2 0.2478599548339843 9 Unmodified _VVQMLFLKW_ REV__ENST00000380698.4_1_6:2900796-2903441:-|nuORF 2.059750862983233 0.8427793054688888 1 Y 1 -1 13.495 0.0 0.0 1.1607 0.0 0.0 981.5818809375056 0.0 981.5818809375056 0.0 1.901056208558032 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1607 - 17 + 1 2.101 42751.0 1.0 4565 3538 8096 DOHH2_400M_050219_1,8105 DOHH2_400M_050219_1,8105,VVQMLFLKW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8106 45.602 291.0 307920.0 25 0 30939.0 + 33050 SEPVPKGLW 9 99 506.77654302191 1011.53853311062 2 506.7771484255791 MULTI CID FTMS 0 0 0 8096 168336.671875 1.0 0 0.0 10 Unmodified _SEPVPKGLW_ ENSG00000112182|ENST00000257749|BACH2 25.399314129420983 0.2080152500878129 1 {[ES]|[DT]|[{I|L}C]}PVP 5 4 25.348 0.0 0.0 2.5059 0.0 0.0 0.0 499.27314172916255 499.27314172916255 10.286348753279436 0.0 0.0 0.0 0 0.6139829889124311 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}PVP 2.5059 + + 103 + 1 2.101 74885.5 1.0 4566 3538 8096 DOHH2_400M_050219_1,8106 DOHH2_400M_050219_1,8106,SEPVPKGLW False True SEPVPKGLW 45.601644 506.777148425579 1604674.875 8096.0 ENSG00000112182|ENST00000257749|BACH2 5.8959832191467285 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8107 45.607 275.0 210440.0 25 0 12516.0 + 10317 FSDPGQPMSF 10 107 556.7392206939882 1111.4638884547762 2 556.7394897341728 MULTI CID FTMS 0 0 0 8096 139997.921875 0.7636825215534693 -1 0.1410903930664062 11 Unmodified _FSDPGQPMSF_ ENSG00000205531|ENST00000380542|NAP1L4;ENST00000528363.5_1_11:2975753-2985939:-|nuORF;nc|ENSG00000205531|Q99733-2|NAP1L4 36.12702656103203 0.1984647928738587 1 S{M(Oxidation (M))|F} 2 8 19.341 0.0 0.0 1.7401 0.0 0.0 859.3521005903216 0.0 859.3521005903216 0.0 -2.6565133047765457 -2.6565133047765457 0.0 0 0.0 0.0 0.2887254899964357 0.0 + S{M(Oxidation (M))|F} 1.7401 + + 243 + 1 2.101 48690.0 1.0 4567 3538 8096 DOHH2_400M_050219_1,8107 DOHH2_400M_050219_1,8107,FSDPGQPMSF False True FSDPGQPMSF 45.606727 556.739489734173 1100281.625 8096.0 nc|ENSG00000205531|Q99733-2|NAP1L4;;ENST00000528363.5_1_11:2975753-2985939:-|nuORF;;ENSG00000205531|ENST00000380542|NAP1L4 4.104085524876912 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8108 45.611 232.0 240910.0 25 0 33783.0 14724 IKQRHKPW 8 78 546.822506916714 1091.630460900228 2 546.8225585818291 MULTI CID FTMS 0 0 0 8096 143144.015625 0.4345511133086652 1 -0.0812454223632812 12 Unmodified _IKQRHKPW_ ENSG00000166801|ENST00000675163|FAM111A 2.577480529830294 0.808687252328423 1 Y 1 8 13.099 0.0 0.0 1.1999 0.0 0.0 910.5556908580388 0.0 910.5556908580388 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1999 - 15 + 1 2.101 47321.7 1.0 4568 3538 8096 DOHH2_400M_050219_1,8108 DOHH2_400M_050219_1,8108,IKQRHKPW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8109 45.625 800.0 254050.0 25 0 31987.0 11589 GKPRLHLI 8 199 467.30170929855205 932.588865663904 2 467.3015319705009 MULTI CID FTMS 0 0 0 8096 131422.015625 1.0 0 0.0 13 Unmodified _GKPRLHLI_ ENSG00000164122|ENST00000296525|ASB5;nc|ENSG00000164122|Q8WWX0-2|ASB5 2.577480529830294 0.808687252328423 1 {I|L} 1 7 13.495 0.0 0.0 1.447 0.0 0.0 801.4936030680042 0.0 801.4936030680042 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.447 + + 74 + 1 2.101 154407.2 0.5600000023841858 4569 3538 8096 DOHH2_400M_050219_1,8109 DOHH2_400M_050219_1,8109,GKPRLHLI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8110 45.639 800.0 123990.0 25 0 11521.0 + 20694 LLRPHVPL 8 137 472.80392154087656 943.5932901485533 2 472.8035766482353 MULTI CID FTMS 0 0 0 8096 130073.2578125 1.0 0 0.0 14 Unmodified _LLRPHVPL_ REV__ENST00000469672.5_1_14:74762559-74769587:-|nuORF;REV__ENST00000555617.5_1_14:74759536-74766325:-|nuORF 6.354104778181461 0.7857632046190106 1 AP{I|L} 3 -1 13.856 0.0 0.0 1.4684 0.0 0.0 644.4077870741376 0.0 644.4077870741376 0.0 5.64582516582542 0.0 0.0 0 0.0 0.0 0.0 0.0 AP{I|L} 1.4684 - 68 + 1 2.101 77181.5 0.5600000023841858 4570 3538 8096 DOHH2_400M_050219_1,8110 DOHH2_400M_050219_1,8110,LLRPHVPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8111 45.648 472.0 242890.0 25 0 21773.0 + + 11693 KEGYGLSW 8 150 470.23297955275336 938.4514061723067 2 470.2329589724541 MULTI CID FTMS 0 0 0 8096 102052.6796875 0.6446309226600394 -1 0.1410903930664062 15 Unmodified _GLFSSVGSW_ ENSG00000102054|ENST00000380087|RBBP7;ENST00000486166.1_1_X:16871803-16876886:-|nuORF;nc|ENSG00000162521|Q09028-4|RBBP4;nc|ENSG00000162521|Q09028-3|RBBP4;ENST00000502424.1_1_5:14797477-14798464:-|nuORF;nc|ENSG00000162521|Q09028-2|RBBP4;ENST00000398588.2_1_6:58446590-58447106:-|nuORF;ENSG00000162521|ENST00000373493|RBBP4;nc|ENSG00000102054|Q16576-2|RBBP7 42.09456458481378 0.0639583784996157 1 {[CT]|[{M(Oxidation (M))|F}G]}SVSG{I|L}SW 9 -1 + 55.328 0.0 0.0 5.8956 5.8956 83.009 0.0 0.0 0.0 1.4215905896025305 1.4215905896025305 1.4215905896025305 4.889465451849091 0 0.0 0.0 1.372363747448347 0.0 {[CT]|[{M(Oxidation (M))|F}G]}SVSG{I|L}SW;[YQ]VSG{I|L}SW;{[CT]|[{M(Oxidation (M))|F}G]}SVEKSW;{[CT]|[{M(Oxidation (M))|F}G]}SVTRSW;[YN]{I|L}SG{I|L}SW;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{M(Oxidation (M))|F}V]KSW;{[CT]|[{M(Oxidation (M))|F}G]}SVTKDW;[YQ]VEKSW;{[CT]|[{M(Oxidation (M))|F}G]}S{I|L}GSVC(Carbamidomethyl (C)){I|L};[YQ]VTRSW 5.8956;5.3746;5.3086;5.1209;5.0782;5.0367;4.9273;4.7949;4.6139;4.6072 -;-;-;-;-;-;-;-;-;- 487 1 2.101 91681.9 1.0 4571 3538 8096 DOHH2_400M_050219_1,8111 DOHH2_400M_050219_1,8111,GLFSSVGSW False False KEGYGLSW 45.648239 470.232958972454 728615.5625 8096.0 ENSG00000102054|ENST00000380087|RBBP7;;ENST00000486166.1_1_X:16871803-16876886:-|nuORF;;nc|ENSG00000162521|Q09028-4|RBBP4;;nc|ENSG00000162521|Q09028-3|RBBP4;;ENST00000502424.1_1_5:14797477-14798464:-|nuORF;;nc|ENSG00000162521|Q09028-2|RBBP4;;ENST00000398588.2_1_6:58446590-58447106:-|nuORF;;ENSG00000162521|ENST00000373493|RBBP4;;nc|ENSG00000102054|Q16576-2|RBBP7 4.371824820836385 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8113 45.653 44.0 1089200.0 25 0 209170.0 + 31737 RRSTKGLV 8 61 458.7882241808673 915.5618954285346 2 458.7880126833916 MULTI CID FTMS 0 0 0 8112 1059488.25 0.5180425792205658 1 -0.139068603515625 1 Unmodified _RRSTKGLV_ REV__ENSG00000114993|ENST00000272430|RTKN;REV__ENST00000464094.2_1_2:74659592-74666815:-|nuORF;REV__ENST00000472518.1_1_2:74659592-74668973:-|nuORF;REV__nc|ENSG00000114993|Q9BST9-2|RTKN;REV__nc|ENSG00000114993|Q9BST9-3|RTKN 0.0 0.8243325171867699 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.101 41246.3 1.0 4572 3539 8112 DOHH2_400M_050219_1,8113 DOHH2_400M_050219_1,8113,RRSTKGLV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8114 45.654 58.0 815780.0 25 0 168340.0 30250 QWVRLLYR 8 72 567.3300135817798 1132.6454742303597 2 567.3298217654228 MULTI CID FTMS 0 0 0 8112 848954.3125 0.2490520331873093 8 -0.832611083984375 2 Unmodified _QWVRLLYR_ ENSG00000142530|ENST00000600100|GARIN5A;nc|ENSG00000142530|Q6IPT2-2|GARIN5A 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.101 42716.6 1.0 4573 3539 8112 DOHH2_400M_050219_1,8114 DOHH2_400M_050219_1,8114,QWVRLLYR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8115 45.656 67.0 685010.0 25 0 84692.0 + 33153 SEVPGSIPNSW 11 77 586.7829913913413 1171.5514298494825 2 586.7831909060478 MULTI CID FTMS 0 0 0 8112 747416.4375 1.0 0 0.0 3 Unmodified _SEVPGSIPNSW_ ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-2|MLH1;nc|ENSG00000076242|P40692-3|MLH1 59.36838082759317 0.0717085717264091 1 {I|L}PNSW 5 6 38.372 0.0 0.0 3.2753 0.0 0.0 556.2487336892552 0.0 556.2487336892552 0.0 20.452490459521968 0.0 0.0 0 0.3807196863200844 0.0 1.110924374808178 0.4247425010840047 + {I|L}PNSW 3.2753 + + 89 + 1 2.101 39743.5 1.0 4574 3539 8112 DOHH2_400M_050219_1,8115 DOHH2_400M_050219_1,8115,SEVPGSIPNSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8116 45.661 260.0 246500.0 25 0 43691.0 30229 QWRRRPALR 9 80 619.8692438564378 1237.7239347796756 2 619.8692504763603 MULTI CID FTMS 0 0 0 8112 288888.84375 0.5609248408867673 1 -0.139068603515625 4 Unmodified _QWRRRPALR_ ENST00000240139.9_1_8:22298692-22298875:+|nuORF 0.6014990680409731 0.8936861360942873 1 Q 1 8 9.9148 0.0 0.0 0.80105 0.0 0.0 1091.6545053136583 0.0 1091.6545053136583 0.0 0.7661418804808839 0.0 0.0 0 0.0 0.0 0.0 0.0 + Q 0.80105 + + 14 + 1 2.101 55175.5 1.0 4575 3539 8112 DOHH2_400M_050219_1,8116 DOHH2_400M_050219_1,8116,QWRRRPALR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8117 45.664 170.0 213360.0 25 0 16808.0 + 8282 EEFRHVIAW 9 75 593.8075272039277 1185.6005014746554 2 593.8064453005791 MULTI CID FTMS 0 0 0 8112 272259.4375 1.0 0 0.0 5 Unmodified _EQLKISPDAW_ ENSG00000117036|ENST00000368192|ETV3;nc|ENSG00000117036|P41162-2|ETV3;ENSG00000253831|ENST00000454449|ETV3L;ENST00000460850.1_1_1:157105261-157106150:-|nuORF 12.240655878213236 0.6421556946785427 1 V{I|L}AW 4 7 41.186 0.0 0.0 3.4738 0.0 0.0 698.3165857117195 0.0 698.3165857117195 0.0 34.195925227640984 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 V{I|L}AW 3.4738 - 25 1 2.101 34991.7 1.0 4576 3539 8112 DOHH2_400M_050219_1,8117 DOHH2_400M_050219_1,8117,EQLKISPDAW False False EEFRHVIAW 45.664043 593.806445300579 1050406.375 8112.0 ENSG00000117036|ENST00000368192|ETV3;;nc|ENSG00000117036|P41162-2|ETV3;;ENSG00000253831|ENST00000454449|ETV3L;;ENST00000460850.1_1_1:157105261-157106150:-|nuORF 1.7366703351338704 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8118 45.668 199.0 363090.0 25 0 33914.0 + 41822 VPYEKGFAL 9 93 512.2793514148067 1022.5441498964134 2 512.2794677615166 MULTI CID FTMS 0 0 0 8112 255485.921875 0.2109739518486321 -2 0.2223358154296875 6 Unmodified _VPYEKGFAL_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 34.40172386719151 0.1061884637610825 1 VPY[KT][MT]A{I|L} 9 3 + 54.803 0.0 0.0 5.3594 5.3594 82.948 0.0 0.0 0.0 3.478911906295324 0.8881746517799627 0.8881746517799627 7.231975075880328 0 0.6989700043360187 1.5228787452803376 0.3252574989159953 0.0 VPY[KT][MT]A{I|L};VPY[YG][Q{I|L}]A{I|L};VP[KT]Y[MT]A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EKK{M(Oxidation (M))|F}V{I|L};VPY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[YE]PKK{M(Oxidation (M))|F}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EKK[MD]{I|L};[YE]KPK{M(Oxidation (M))|F}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM}[KA]AV{I|L};[YE]K{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PV{I|L} 5.3594;4.6522;4.5747;4.4578;4.2619;3.6968;3.3851;2.7636;2.1849;1.9079 -;-;-;-;-;-;-;-;-;- 494 + 1 2.101 68573.5 1.0 4577 3539 8112 DOHH2_400M_050219_1,8118 DOHH2_400M_050219_1,8118,VPYEKGFAL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8119 45.672 243.0 267730.0 25 0 16670.0 20976 LNLYTELL 8 87 489.78112231958335 977.5476917059668 2 489.7812682986259 MULTI CID FTMS 0 0 0 8112 185701.296875 1.0 0 0.0 7 Unmodified _LNLYTELL_ ENSG00000132300|ENST00000254630|PTCD3;ENST00000480102.1_1_2:86348636-86354336:+|nuORF;ENST00000484203.5_1_2:86348636-86354493:+|nuORF;ENST00000594883.1_1_19:57687347-57687830:+|nuORF 54.773552608820026 0.1167943196628344 1 {[QV]|[N{I|L}]|[RA]|[KV]}[YT]KN{I|L}{I|L} 8 3 + 68.51 0.0 0.0 7.0084 7.0084 91.776 0.0 0.0 0.0 15.981362441963327 14.904630595263413 14.904630595263413 9.262137858390815 0 1.0044321917401078 2.0 0.5 1.1861818737241734 {[QV]|[N{I|L}]|[RA]|[KV]}[YT]KN{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YT]KGG{I|L}{I|L};[KA][YE]KN{I|L}{I|L};[KA][YE]KGG{I|L}{I|L};[KA][YT][VG]N{I|L}{I|L} 7.0084;6.0609;5.3735;4.426;4.1181 -;-;-;-;- 265 1 2.101 56163.9 1.0 4578 3539 8112 DOHH2_400M_050219_1,8119 DOHH2_400M_050219_1,8119,LNLYTELL True False RGMFKNLL 45.672383 489.781268298626 1017710.3125 8112.0 ENSG00000047315|ENST00000314595|POLR2B 4.3567689259847 2.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8120 45.686 800.0 198870.0 25 0 32758.0 + 11439 LSDDRSNILIY 11 120 654.8433571746455 1307.6721614160908 2 654.8434936404228 MULTI CID FTMS 0 0 0 8112 144247.359375 1.0 0 0.0 8 Unmodified _GHQCFISKILY_ ENSG00000142892|ENST00000370812|PIGK;nc|ENSG00000142892|Q92643-2|PIGK 29.84058131909904 0.3915366693542702 1 {I|L}{I|L}[WQ]N[MD]{I|L}{I|L}Y 10 7 + 57.558 0.0 0.0 4.4016 4.4016 79.979 0.0 0.0 0.0 11.962724883926654 42.86536418661561 11.962724883926654 7.73786444981193 0 0.9247425010840048 1.3979400086720375 0.3494850021680094 0.5941876774005248 {I|L}{I|L}[WQ]N[MD]{I|L}{I|L}Y;{I|L}{I|L}[WQ]AS{[DS]|[MA]|[CV]|TT}{I|L}{I|L}Y;{I|L}{I|L}[WQ]N{[QG]|[NA]}SS{I|L}Y;{[{M(Oxidation (M))|F}H]|[RQ]}KK{I|L}[C(Carbamidomethyl (C))S]{I|L}{I|L}Y;{I|L}{I|L}[WQ]AS[WE]{I|L}Y;{[{M(Oxidation (M))|F}H]|[RQ]}KK[C(Carbamidomethyl (C))S]{I|L}{I|L}{I|L}Y;{[{M(Oxidation (M))|F}H]|[RQ]}KKN[MD]{I|L}{I|L}Y;{I|L}{I|L}[WQ]AS{NN|[MP]|[D{I|L}]|[EV]}S{I|L}Y;{I|L}{I|L}[WQ]A{NN|[MP]|[D{I|L}]|[EV]}SS{I|L}Y;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}TR[MD]{I|L}{I|L}Y 4.4016;3.8098;3.7109;3.1121;3.0734;3.0511;3.0511;2.9812;2.9812;2.8256 -;-;-;-;-;-;-;-;-;- 800 1 2.101 128385.2 0.7200000286102295 4579 3539 8112 DOHH2_400M_050219_1,8120 DOHH2_400M_050219_1,8120,GHQCFISKILY False False LSDDRSNILIY 45.68622 654.843493640423 1047404.6875 8112.0 ENSG00000142892|ENST00000370812|PIGK;;nc|ENSG00000142892|Q92643-2|PIGK 0.2881192763646443 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8121 45.695 525.0 178670.0 25 0 12228.0 + 11265 GETEVLKVI 9 129 494.2914088773407 0 494.2905761599541 PEAK CID FTMS 0 0 0 8112 142704.28125 1.0 0 0.0 9 Unmodified _GETEVLKVI_ ENSG00000164346|ENST00000610426|NSA2;ENST00000513356.1_1_5:74063185-74067331:+|nuORF;ENST00000551218.1_1_12:94914868-94915450:-|nuORF;ENST00000560515.1_1_15:59693458-59694001:-|nuORF 65.23502041540118 0.0134875362242201 1 TEVV{I|L}G 6 5 14.641 0.0 0.0 1.4841 0.0 0.0 317.1607463662064 68.05149255924061 385.212238925447 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TEVV{I|L}G 1.4841 - 96 + 1 2.101 75013.8 1.0 4580 3539 8112 DOHH2_400M_050219_1,8121 DOHH2_400M_050219_1,8121,GETEVLKVI True True GETEVLKVI 45.695443 494.290576159954 651879.0 8112.0 ENST00000513356.1_1_5:74063185-74067331:+|nuORF;;ENSG00000164346|ENST00000610426|NSA2;;ENST00000560515.1_1_15:59693458-59694001:-|nuORF;;ENST00000551218.1_1_12:94914868-94915450:-|nuORF 4.582055568695068 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8122 45.709 800.0 108070.0 25 0 36202.0 20684 LLRLGLHGVLW 11 94 638.8954595101345 1275.776366087069 2 638.8952514529228 MULTI CID FTMS 0 0 0 8112 122783.34375 0.6359276657158937 -2 0.2223358154296875 10 Unmodified _LLRLGLHGVLW_ ENSG00000134109|ENST00000256497|EDEM1;ENST00000443790.1_1_3:5229490-5231099:+|nuORF 1.4819007175156935 0.86815623132643 1 Y 1 11 11.99 0.0 0.0 0.9398 0.0 0.0 1094.701626562458 0.0 1094.701626562458 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.9398 - 47 + 1 2.101 69864.6 0.6600000262260437 4581 3539 8112 DOHH2_400M_050219_1,8122 DOHH2_400M_050219_1,8122,LLRLGLHGVLW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8123 45.723 800.0 137120.0 25 0 9716.1 -1 LLLMIAMTL 9 168 530.8097025541832 1059.6048521751663 2 530.8094970583916 MULTI CID FTMS 0 0 0 8112 97062.0625 0.393311322067011 4 -0.4602813720703125 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LLLMIAMTL_ ENST00000513116.1_1_1:26211808-26212198:-|nuORF 4.75600775471527 0.7486543447549536 1 Y 1 -1 13.979 0.0 0.0 1.3193 0.0 0.0 878.5301584269226 0.0 878.5301584269226 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3193 - 326 + 1 2.101 87664.7 0.5400000214576721 4582 3539 8112 DOHH2_400M_050219_1,8123 DOHH2_400M_050219_1,8123,LLLMIAMTL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8124 45.738 800.0 124470.0 25 0 6900.6 + 26478 NTLWYQPQVT 10 116 625.3130016783858 0 625.3127319216728 PEAK CID FTMS 0 0 0 8112 82555.75 1.0 0 0.0 12 Unmodified _NTLWYQPQVT_ REV__ENST00000396296.7_2_10:27442195-27443196:-|nuORF 49.55428908609986 0.051331770361836 1 SQ{I|L}{M(Oxidation (M))|F}GDA 7 -1 36.023 0.0 0.0 2.8851 0.0 0.0 131.09333626517156 396.1660250299438 527.2593612951154 0.0 0.0 0.0 0.0 0 1.7302046884880935 0.0 0.3807196863200844 0.0 SQ{I|L}{M(Oxidation (M))|F}GDA 2.8851 - 659 + 1 2.101 85866.2 0.5699999928474426 4583 3539 8112 DOHH2_400M_050219_1,8124 DOHH2_400M_050219_1,8124,NTLWYQPQVT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8125 45.752 800.0 187430.0 25 0 17513.0 -1 0 181 479.2759733532933 478.2686968866933 1 479.2755004763603 MULTI CID FTMS 0 0 0 8112 88041.390625 1.0 0 0.0 13 1 {I|L} 1 -1 11.783 0.0 0.0 2.4636 0.0 0.0 347.1735411023167 0.0 347.1735411023167 0.0 1.2981865525287797 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.4636 - 47 + 1 2.101 117179.6 0.449999988079071 4584 3539 8112 DOHH2_400M_050219_1,8125 DOHH2_400M_050219_1,8125, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8126 45.76 336.0 304780.0 25 0 17676.0 + + 34692 REIAPGLTGSEW 12 103 658.3356898134233 1314.6568266936465 2 658.3359252810478 MULTI CID FTMS 0 0 0 8112 270342.28125 1.0 0 0.0 14 Unmodified _SPTAQRDLLEW_ nc|ENSG00000110497|Q9C0C7-2|AMBRA1;nc|ENSG00000110497|Q9C0C7-5|AMBRA1;nc|ENSG00000110497|Q9C0C7-4|AMBRA1;ENSG00000110497|ENST00000683756|AMBRA1;nc|ENSG00000110497|Q9C0C7-6|AMBRA1;nc|ENSG00000110497|Q9C0C7-3|AMBRA1 19.361941925380144 0.6323962752489956 1 {[RE]|[WV]}{I|L}A[PG]{I|L}TGSEW 12 -1 + 61.653 0.0 0.0 4.6897 4.6897 81.09 0.0 0.0 0.0 3.384989336905768 35.18745656177387 3.384989336905768 7.848939488666424 0 1.2302046884880935 0.0 1.1549471895720984 0.0 {[RE]|[WV]}{I|L}A[PG]{I|L}TGSEW;{[RE]|[WV]}{I|L}[QP]{I|L}TGSEW;{[RE]|[WV]}{I|L}A[PG]{I|L}GTSEW;{[RE]|[WV]}{I|L}[QP]{I|L}GTSEW;{[RE]|[WV]}{I|L}A[NG]{I|L}{I|L}DEW;{[RE]|[WV]}{I|L}[HS][KS]GSE[VS];{[RE]|[WV]}{I|L}{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}DEW;{[RE]|[WV]}{I|L}A[NG][HV]S{M(Oxidation (M))|F}W;{[RE]|[WV]}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HV]SE[VS];{[RE]|[WV]}{I|L}A[PG]{I|L}[MN]E[VS] 4.6897;4.0927;3.9421;3.3451;2.7614;2.2756;2.1671;2.0537;2.0178;1.9687 -;-;-;-;-;-;-;-;-;- 452 1 2.101 77484.1 1.0 4585 3539 8112 DOHH2_400M_050219_1,8126 DOHH2_400M_050219_1,8126,SPTAQRDLLEW False False REIAPGLTGSEW 45.759514 658.335925281048 1678397.375 8112.0 nc|ENSG00000110497|Q9C0C7-2|AMBRA1;;nc|ENSG00000110497|Q9C0C7-5|AMBRA1;;nc|ENSG00000110497|Q9C0C7-4|AMBRA1;;ENSG00000110497|ENST00000683756|AMBRA1;;nc|ENSG00000110497|Q9C0C7-6|AMBRA1;;nc|ENSG00000110497|Q9C0C7-3|AMBRA1 8.419867515563965 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8127 45.773 800.0 128270.0 25 0 16282.0 + 33776 SLATTRWL 8 159 474.26936016681 0 474.2694885134697 PEAK CID FTMS 0 0 0 8112 97789.828125 1.0 0 0.0 15 Unmodified _SLATTRWL_ REV__ENST00000496992.1_1_2:192242611-192248009:+|nuORF 6.2057823575117 0.5769469700303246 1 E 1 -1 6.9897 0.0 0.0 0.73846 0.0 0.0 718.3759568064731 96.0826662652953 814.4586230717684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.73846 - 66 + 1 2.101 81610.3 0.4799999892711639 4586 3539 8112 DOHH2_400M_050219_1,8127 DOHH2_400M_050219_1,8127,SLATTRWL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8128 45.787 800.0 47052.0 25 0 10288.0 -1 0 47 771.0403299222115 2310.0991603668344 3 771.7026855349541 MULTI CID FTMS 0 0 0 8112 45113.546875 1.0 0 0.0 16 1 TGY 3 -1 13.812 0.0 0.0 0.59791 0.0 0.0 1175.5149855844795 810.4341892766473 1985.9491748611272 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TGY 0.59791 - 6 + 1 2.101 37841.7 0.550000011920929 4587 3539 8112 DOHH2_400M_050219_1,8128 DOHH2_400M_050219_1,8128, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8130 45.793 66.0 453190.0 25 0 39955.0 -1 0 41 766.369451872036 2296.086526216308 3 766.7043334841728 MULTI CID FTMS 0 0 0 8129 542131.0625 0.0706385645049108 2 -0.2014541625976562 1 1 TGYGM 5 -1 32.206 0.0 0.0 1.4027 0.0 0.0 1161.4967378889671 622.369505893189 1783.8662437821563 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 TGYGM 1.4027 - 37 + 1 2.095 29050.7 1.0 4588 3540 8129 DOHH2_400M_050219_1,8130 DOHH2_400M_050219_1,8130, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8131 45.794 21.0 2082200.0 25 0 482880.0 + 31732 RRRWRPGPP 9 62 589.3433184242272 1176.6720839152542 2 589.3433105349541 MULTI CID FTMS 0 0 0 8129 2811050.5 0.8568829924584372 -2 0.2203140258789062 2 Unmodified _RRRWRPGPP_ REV__ENST00000233535.8_1_2:27481772-27486087:-|nuORF 0.6014990680409731 0.8936861360942873 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.095 40255.5 1.0 4589 3540 8129 DOHH2_400M_050219_1,8131 DOHH2_400M_050219_1,8131,RRRWRPGPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8132 45.795 33.0 1567800.0 25 0 389850.0 + 37347 TKEVNSGFFY 10 62 596.2882353235657 1190.5619177139313 2 596.2880126833916 MULTI CID FTMS 0 0 0 8129 1551519.125 0.6310223585161294 -1 0.139068603515625 3 Unmodified _TKEVNSGFFY_ nc|ENSG00000132141|Q92526-3|CCT6B 29.081581746732265 0.3152867722954398 1 {M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 3 7 31.198 0.0 0.0 2.6204 0.0 0.0 715.3513473926446 0.0 715.3513473926446 0.0 14.208187539523747 0.0 0.0 0 0.5 0.0 0.0 0.0 + {M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 2.6204 + + 36 1 2.095 41238.9 1.0 4590 3540 8129 DOHH2_400M_050219_1,8132 DOHH2_400M_050219_1,8132,TKEVNSGFFY False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8133 45.796 46.0 1393300.0 25 0 277830.0 + 2503 ARGPQLLL 8 82 434.2743736819685 866.5341944307371 2 434.2743102908134 MULTI CID FTMS 0 0 0 8129 1206977.0 0.2975681598467014 -2 0.2203140258789062 4 Unmodified _ARGPQLLL_ ENST00000474629.6_1_3:122449243-122449357:+|nuORF 26.34127834903884 0.4900704351052977 1 {I|L}{I|L} 2 6 21.454 0.0 0.0 2.4758 0.0 0.0 622.3551153065168 0.0 622.3551153065168 0.0 7.501225267834 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 2.4758 + + 37 + 1 2.095 55223.7 1.0 4591 3540 8129 DOHH2_400M_050219_1,8133 DOHH2_400M_050219_1,8133,ARGPQLLL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8134 45.797 40.0 1140800.0 25 0 179290.0 -1 VINFHMKKV 9 56 566.3218601988744 1130.6291674645488 2 566.3222534060478 MULTI CID FTMS 0 0 0 8129 1060408.25 1.0 0 0.0 5 Oxidation (M) _VINFHM(Oxidation (M))KKV_ ENST00000498116.1_1_4:15732587-15732905:-|nuORF 1.844237919475145 0.850302753031785 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.095 42295.7 1.0 4592 3540 8129 DOHH2_400M_050219_1,8134 DOHH2_400M_050219_1,8134,VINFHMKKV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8135 45.799 57.0 873180.0 25 0 142700.0 + 37654 TLLTLEPL 8 84 450.27478621327 898.5350194933401 2 450.2745849490166 MULTI CID FTMS 0 0 0 8129 865524.8125 0.1826393579592921 2 -0.2014541625976562 6 Unmodified _TLLTLEPL_ REV__ENSG00000240771|ENST00000286494|ARHGEF25;REV__nc|ENSG00000240771|Q86VW2-2|ARHGEF25;REV__nc|ENSG00000240771|Q86VW2-3|ARHGEF25 4.75600775471527 0.7954636275367004 1 {I|L} 1 -1 15.485 0.0 0.0 1.7233 0.0 0.0 767.4399857792761 0.0 767.4399857792761 0.0 9.771212547196624 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 1.7233 + + 7 + 1 2.095 45561.3 1.0 4593 3540 8129 DOHH2_400M_050219_1,8135 DOHH2_400M_050219_1,8135,TLLTLEPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8136 45.8 53.0 894300.0 25 0 143040.0 + 11325 GEYPSGINTW 10 88 562.2561479256755 1122.4977429181508 2 562.2567626833916 MULTI CID FTMS 0 0 0 8129 780790.8125 0.6140610365999981 1 -0.08746337890625 7 Unmodified _GEYPSGINTW_ ENSG00000155508|ENST00000285896|CNOT8;ENST00000521583.5_1_5:154238316-154247291:+|nuORF;nc|ENSG00000155508|Q9UFF9-3|CNOT8 13.90604991867851 0.6142120002215601 1 TW 2 8 14.693 0.0 0.0 1.3089 0.0 0.0 817.3593589843603 0.0 817.3593589843603 0.0 -1.7669533833608178 -1.7669533833608178 0.0 0 0.0 0.0 0.0 0.0 + TW 1.3089 + + 186 + 1 2.095 44574.9 1.0 4594 3540 8129 DOHH2_400M_050219_1,8136 DOHH2_400M_050219_1,8136,GEYPSGINTW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8137 45.802 73.0 754780.0 25 0 103920.0 + 6177 DTDISLIRY 9 56 548.287296266994 1094.5600396007878 2 548.2874633669853 MULTI CID FTMS 0 0 0 8129 682375.375 0.3509871161631053 -1 0.139068603515625 8 Unmodified _DTDISLIRY_ ENSG00000101158|ENST00000652272|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;nc|ENSG00000101158|Q8IXH7|NELFCD 45.69961567697781 0.0497987121815769 1 {[ES]|[DT]|[{I|L}C]}D{I|L}S{I|L}{I|L}[YR] 9 0 + 48.663 0.0 0.0 4.4459 4.4459 86.765 0.0 0.0 0.0 43.177959224778135 2.806037127601968 2.806037127601968 29.476212463643417 0 0.805462187404089 0.0 0.0 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}D{I|L}S{I|L}{I|L}[YR];{[ES]|[DT]|[{I|L}C]}Y[HK]{I|L}[YR] 4.4459;1.7529 +;- + 76 + 1 2.095 46620.8 1.0 4595 3540 8129 DOHH2_400M_050219_1,8137 DOHH2_400M_050219_1,8137,DTDISLIRY True True DTDISLIRY 45.801867 548.287463366985 12279049.0 8129.0 ENST00000474543.5_1_20:57564608-57568882:+|nuORF;;nc|ENSG00000101158|Q8IXH7|NELFCD;;ENSG00000101158|ENST00000652272|NELFCD 5.245271364847819 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8138 45.805 138.0 537730.0 25 0 97796.0 -1 0 84 378.7000900917602 755.3856272503205 2 378.6999389529228 MULTI CID FTMS 0 0 0 8129 493511.28125 1.0 0 0.0 9 1 {[{M(Oxidation (M))|F}D]|MM}{I|L}SK{M(Oxidation (M))|F} 6 -1 + 42.655 0.0 0.0 5.6467 5.6467 82.112 0.0 0.0 0.0 6.478174818886373 4.973246408079504 4.973246408079504 4.973246408079504 0 0.3494850021680094 0.0 0.6307196863200843 0.2887254899964357 {[{M(Oxidation (M))|F}D]|MM}{I|L}SK{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}{I|L}S{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}D]|MM}{I|L}{M(Oxidation (M))|F}SK;[KS]{I|L}{M(Oxidation (M))|F}D{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{I|L}D{M(Oxidation (M))|F};[KS]{M(Oxidation (M))|F}{I|L}D{M(Oxidation (M))|F} 5.6467;4.9884;3.6938;2.2323;1.6921;1.5401 -;-;-;-;-;- 110 + 1 2.095 65829.3 1.0 4596 3540 8129 DOHH2_400M_050219_1,8138 DOHH2_400M_050219_1,8138, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8139 45.807 107.0 635920.0 25 0 58044.0 + 8728 EVLQRIESL 9 84 543.8096986440046 1085.604844354809 2 543.8113891482353 MULTI CID FTMS 0 0 0 8129 484055.8125 0.6444552451476717 -1 0.139068603515625 10 Unmodified _EVLQRIESL_ ENSG00000182185|ENST00000471583|RAD51B;ENST00000474051.1_1_14:68352547-68354002:+|nuORF;ENST00000553595.5_1_14:68331761-69149671:+|nuORF;nc|ENSG00000182185|O15315-1|RAD51B;nc|ENSG00000182185|O15315-4|RAD51B;nc|ENSG00000182185|O15315-5|RAD51B;nc|ENSG00000182185|O15315|RAD51B 110.6747026088012 0.0053351249510064 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}QR{I|L}ES{I|L} 9 0 {NN|[MP]|[D{I|L}]|[EV]} + + 57.771 26.338 11.546 5.3215 5.3215 57.713 0.0 0.0 0.0 0.0 36.93143825037879 0.0 0.0 0 1.385151878060192 0.0 1.9489700043360187 0.3494850021680094 + + {NN|[MP]|[D{I|L}]|[EV]}{I|L}QR{I|L}ES{I|L} 5.3215 + + 300 + 1 2.095 55980.4 1.0 4597 3540 8129 DOHH2_400M_050219_1,8139 DOHH2_400M_050219_1,8139,EVLQRIESL True True EVLQRIESL 45.806932 543.811389148235 4367287.0 8129.0 nc|ENSG00000182185|O15315-5|RAD51B;;nc|ENSG00000182185|O15315-1|RAD51B;;nc|ENSG00000182185|O15315-4|RAD51B;;ENST00000474051.1_1_14:68352547-68354002:+|nuORF;;ENST00000553595.5_1_14:68331761-69149671:+|nuORF;;ENSG00000182185|ENST00000471583|RAD51B;;nc|ENSG00000182185|O15315|RAD51B 4.990394274393718 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8140 45.81 170.0 275030.0 25 0 29194.0 + 32877 SEIEGIQSL 9 86 488.25345672527374 974.4923605173476 2 488.2534362673759 MULTI CID FTMS 0 0 0 8129 338799.59375 1.0 0 0.0 11 Unmodified _SEIEGIQSL_ ENSG00000104880|ENST00000668164|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18 74.42276476219924 0.019389277360085 1 {[QN]|[E{I|L}]|[KN]}G{[ES]|[DT]|[{I|L}C]}{I|L}QS{I|L} 9 3 {[QN]|[E{I|L}]|[KN]}G{[ES]|[DT]|[{I|L}C]}{I|L} + + 32.792 27.93 4.4452 3.365 3.365 51.33 0.0 0.0 0.0 0.0 18.34121882396211 0.0 0.0 0 0.4247425010840047 0.0 0.805462187404089 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}G{[ES]|[DT]|[{I|L}C]}{I|L}QS{I|L} 3.365 - 238 + 1 2.095 41335.5 1.0 4598 3540 8129 DOHH2_400M_050219_1,8140 DOHH2_400M_050219_1,8140,SEIEGIQSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8141 45.824 800.0 281290.0 25 0 14123.0 + 8529 ETEQTKFWDY 10 171 673.7990124501476 1345.5834719670952 2 673.7986328005791 MULTI CID FTMS 0 0 0 8129 205793.015625 0.4515104784551312 -1 0.139068603515625 12 Unmodified _ETEQTKFWDY_ ENSG00000196968|ENST00000372841|FUT11 154.7525637096362 1.897774441840115e-05 1 [DP]EQTK{M(Oxidation (M))|F}G{M(Oxidation (M))|F}DY 11 4 + 90.293 0.0 0.0 6.7103 6.7103 87.321 0.0 0.0 0.0 19.942741907339567 29.529562160007814 19.942741907339567 6.989700043360188 0 1.0 1.2218487496163564 3.25751562550854 0.3252574989159953 [DP]EQTK{M(Oxidation (M))|F}G{M(Oxidation (M))|F}DY;[DP]QETK{M(Oxidation (M))|F}G{M(Oxidation (M))|F}DY;[DP]EQTK{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}Y;[DP]E[AG]TK{M(Oxidation (M))|F}G{M(Oxidation (M))|F}DY;[DP]EQTK{M(Oxidation (M))|F}GD{M(Oxidation (M))|F}Y;[DP]QETK{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}Y;[DP]EQT[RH]ATEY;[DP]E[AG]TK{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}Y;[DP]QETK{M(Oxidation (M))|F}GD{M(Oxidation (M))|F}Y;[DP]EQTKMST{M(Oxidation (M))|F}Y 6.7103;6.1909;6.1583;5.7902;5.7392;5.6388;5.5871;5.2382;5.2198;5.2042 -;-;-;-;-;-;-;-;-;- 39939 1 2.095 160712.9 0.8299999833106995 4599 3540 8129 DOHH2_400M_050219_1,8141 DOHH2_400M_050219_1,8141,ETEQTKFWDY True True ETEQTKFWDY 45.824082 673.798632800579 2879011.0 8129.0 ENSG00000196968|ENST00000372841|FUT11 9.164880752563477 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8142 45.828 211.0 461570.0 25 0 47943.0 + 16628 KEIDMLLKEY 10 115 641.3417891055982 1280.6690252779963 2 641.3435546755791 MULTI CID FTMS 0 0 0 8129 203025.453125 0.331329278798421 -2 0.2203140258789062 13 Unmodified _KEIDMLLKEY_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 113.99132306285644 0.0011629984448787 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DM{I|L}{I|L}KEY 10 0 + 103.15 0.0 0.0 8.0541 8.0541 87.481 0.0 0.0 0.0 3.0938593453571883 86.69260654009378 3.0938593453571883 4.2609125905568135 0 3.2302046884880937 0.0 1.8723637474483468 1.079689690656103 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DM{I|L}{I|L}KEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DM{I|L}{I|L}EKY;[K{I|L}]EDM{I|L}{I|L}KEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}D{I|L}M{I|L}KEY;[K{I|L}]EDM{I|L}{I|L}EKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}D{I|L}M{I|L}EKY;KE{I|L}DM{I|L}{I|L}KEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}DM{I|L}KEY;[K{I|L}]ED{I|L}M{I|L}KEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}DM{I|L}EKY 8.0541;7.7214;7.2942;7.2698;6.9615;6.9371;6.6673;6.6219;6.5099;6.2892 +;-;-;-;-;-;+;-;-;- + 2084 1 2.095 79507.6 1.0 4600 3540 8129 DOHH2_400M_050219_1,8142 DOHH2_400M_050219_1,8142,KEIDMLLKEY True True KEIDMLLKEY 45.828088 641.343554675579 5609373.875 8129.0 nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 7.335306644439697 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8143 45.832 208.0 217560.0 25 0 23835.0 + -1 VRNNVIIVM 9 85 529.3130006399166 1056.611448346633 2 529.3132202029228 MULTI CID FTMS 0 0 0 8129 207166.484375 0.7478143950712791 1 -0.08746337890625 14 Carbamidomethyl (C) _C(Carbamidomethyl (C))LVLPLLVM_ ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF 20.871210003555333 0.2717241269066626 1 V{I|L}{I|L}VM 5 -1 44.068 0.0 0.0 4.1707 0.0 0.0 483.2547779767594 0.0 483.2547779767594 0.0 31.303834078233628 0.0 0.0 0 1.0 0.0 0.0 0.0 V{I|L}{I|L}VM 4.1707 - 59 1 2.095 44040.6 1.0 4601 3540 8129 DOHH2_400M_050219_1,8143 DOHH2_400M_050219_1,8143,CLVLPLLVM False False VRNNVIIVM 45.832048 529.313220202923 1724663.0 8129.0 ENSG00000151503|ENST00000534548|NCAPD3;;ENST00000525964.6_1_11:134022841-134052943:-|nuORF 4.792690753936768 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8144 45.835 177.0 314150.0 25 0 22801.0 + 29092 QENNLLKTL 9 103 536.8030121220064 1071.5914713108127 2 536.8040038943291 MULTI CID FTMS 0 0 0 8129 185219.609375 1.0 0 0.0 15 Unmodified _QENNLLKTL_ ENSG00000102804|ENST00000458659|TSC22D1;ENST00000496314.1_1_13:45008764-45009186:-|nuORF;nc|ENSG00000102804|Q15714-2|TSC22D1;nc|ENSG00000102804|Q15714-3|TSC22D1;nc|ENSG00000102804|Q15714-5|TSC22D1 30.63653989081413 0.1413794767160703 1 {NN|[MP]|[D{I|L}]|[EV]}[PS]W{I|L}KT{I|L} 9 4 {NN|[MP]|[D{I|L}]|[EV]}[PS]W + + 29.271 11.576 1.9349 2.7315 2.7315 49.93 0.0 0.0 0.0 0.0 9.827925185753193 0.0 0.0 0 0.0 0.0 0.8169015600442578 0.0 {NN|[MP]|[D{I|L}]|[EV]}[PS]W{I|L}KT{I|L} 2.7315 - 304 + 1 2.095 49809.3 1.0 4602 3540 8129 DOHH2_400M_050219_1,8144 DOHH2_400M_050219_1,8144,QENNLLKTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8145 45.842 362.0 320530.0 25 0 21462.0 + 16682 KENSLITQF 9 126 540.2905762997823 1078.5665996663645 2 540.2915527224541 MULTI CID FTMS 0 0 0 8129 191717.65625 0.675961791138184 -1 0.139068603515625 16 Unmodified _KENSLITQF_ ENSG00000102699|ENST00000381989|PARP4 79.59630418116434 0.0176145593575188 1 [AG]T[QT]{I|L}{I|L}TQ{M(Oxidation (M))|F} 10 5 + 81.461 0.0 0.0 7.5527 7.5527 81.98 0.0 0.0 0.0 0.7288362039627145 15.026975159433531 0.7288362039627145 0.7288362039627145 0 1.174742501084005 1.5228787452803376 1.7134679910804405 0.7742275032520141 [AG]T[QT]{I|L}{I|L}TQ{M(Oxidation (M))|F};[QT][QT]{I|L}{I|L}TQ{M(Oxidation (M))|F};[QT]AAS{I|L}{I|L}TQ{M(Oxidation (M))|F};[AG]TVDK{I|L}TQ{M(Oxidation (M))|F};[QT]VDK{I|L}TQ{M(Oxidation (M))|F};[AG]TAAS{I|L}{I|L}TQ{M(Oxidation (M))|F};[AG]T[QT]{I|L}{I|L}T[AG]{M(Oxidation (M))|F};[AG]T[WR]{I|L}TQ{M(Oxidation (M))|F};[QT][QT]{I|L}{I|L}T[AG]{M(Oxidation (M))|F};[QT][WR]{I|L}TQ{M(Oxidation (M))|F} 7.5527;7.4852;7.3693;6.8913;6.8237;6.7231;6.7031;6.6794;6.6314;6.6169 -;-;-;-;-;-;-;-;-;- 3498 1 2.095 91150.8 1.0 4603 3540 8129 DOHH2_400M_050219_1,8145 DOHH2_400M_050219_1,8145,KENSLITQF True True KENSLITQF 45.842017 540.291552722454 1491147.875 8129.0 ENSG00000102699|ENST00000381989|PARP4 3.9625903566678367 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8146 45.846 168.0 511330.0 25 0 37499.0 + -1 MVTGCLDSLLK 11 111 626.8194781811054 0 626.8206054568291 PEAK CID FTMS 0 0 0 8129 148476.359375 0.885946276293481 -1 0.139068603515625 17 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))VTGC(Carbamidomethyl (C))LDSLLK_ REV__ENSG00000150593|ENST00000280154|PDCD4;REV__ENST00000462577.5_1_10:112645037-112653861:+|nuORF;REV__ENST00000489049.5_1_10:112647518-112650449:+|nuORF;REV__nc|ENSG00000150593|Q53EL6-2|PDCD4 16.149105407346934 0.3934762919021404 1 TD{I|L}{M(Oxidation (M))|F}Q 5 -1 31.911 0.0 0.0 2.5496 0.0 0.0 113.13240976644018 531.1865558423076 644.3189656087478 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.7134679910804405 TD{I|L}{M(Oxidation (M))|F}Q 2.5496 - 285 + 1 2.095 70032.3 1.0 4604 3540 8129 DOHH2_400M_050219_1,8146 DOHH2_400M_050219_1,8146,MVTGCLDSLLK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8147 45.853 388.0 243570.0 25 0 17210.0 + 31356 RNFPDAFEY 9 95 579.7643938182762 1157.5142347033525 2 579.7708618044853 MULTI CID FTMS 0 0 0 -1 0 18 Unmodified _RNFPDAFEY_ ENSG00000135678|ENST00000551568|CPM;ENST00000546912.1_1_12:69260670-69264157:-|nuORF 32.78568957990786 0.1150597335874693 1 {[ES]|[DT]|[{I|L}C]}{I|L}{[WN]|[YH]}A{M(Oxidation (M))|F}EY 9 5 + 39.548 0.0 0.0 3.4166 3.4166 71.677 0.0 0.0 0.0 0.4749216635742925 24.94370806477795 0.4749216635742925 2.570071809000609 0 0.7134679910804405 0.0 0.0 0.6549471895720984 {[ES]|[DT]|[{I|L}C]}{I|L}{[WN]|[YH]}A{M(Oxidation (M))|F}EY;{[CT]|[{M(Oxidation (M))|F}G]}VYYA{M(Oxidation (M))|F}EY;[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[HV]A{M(Oxidation (M))|F}EY;{[MG]|[TS]}[KT][DP]A{M(Oxidation (M))|F}EY;{[MG]|[TS]}[KT][WP]{M(Oxidation (M))|F}EY;[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[VS][HM]EY;{[QV]|[N{I|L}]|[RA]|[KV]}[HT]N[HM]EY;[NP]AE[NS]A[RH]Y;[{M(Oxidation (M))|F}T]Y[NS]A[RH]Y 3.4166;3.1946;2.9983;2.4389;1.6107;1.3784;1.1325;0.92304;0.87884 -;-;-;-;-;-;-;-;- 312 1 2.095 75099.6 1.0 4605 3540 8129 DOHH2_400M_050219_1,8147 DOHH2_400M_050219_1,8147,RNFPDAFEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8148 45.861 405.0 220150.0 25 0 24118.0 + 10427 FTDPGMGNLTY 11 112 608.271390648097 0 608.2711669802666 PEAK CID FTMS 0 0 0 8129 147669.265625 1.0 0 0.0 19 Unmodified _FTDPGMGNLTY_ ENSG00000134569|ENST00000378623|LRP4 41.95555342248728 0.1117779157299508 1 D{I|L}{[CA]|SS}TS 6 9 17.044 0.0 0.0 1.4034 0.0 0.0 530.2367377397503 91.01969324283436 621.2564309825847 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.5796896906561032 0.0 D{I|L}{[CA]|SS}TS 1.4034 - 280 + 1 2.095 68946.7 1.0 4606 3540 8129 DOHH2_400M_050219_1,8148 DOHH2_400M_050219_1,8148,FTDPGMGNLTY True True FTDPGMGNLTY 45.860742 608.271166980267 990117.75 8129.0 ENSG00000134569|ENST00000378623|LRP4 5.324466228485107 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8149 45.875 800.0 82260.0 25 0 7243.1 + 912 AEYPFSSEQKW 11 100 686.3154912681188 1370.6164296030374 2 686.3159667849541 MULTI CID FTMS 0 0 0 8129 146493.0 0.6234338683998283 1 -0.08746337890625 20 Unmodified _AEYPFSSEQKW_ ENSG00000017260|ENST00000510168|ATP2C1;nc|ENSG00000017260|P98194-2|ATP2C1;nc|ENSG00000017260|P98194-3|ATP2C1;nc|ENSG00000017260|P98194-4|ATP2C1;nc|ENSG00000017260|P98194-5|ATP2C1;nc|ENSG00000017260|P98194-6|ATP2C1;nc|ENSG00000017260|P98194-7|ATP2C1;nc|ENSG00000017260|P98194-8|ATP2C1;nc|ENSG00000017260|P98194-9|ATP2C1 29.43715596616401 0.4010092210691691 1 {[CP]|[EA]}YPSQKY 8 4 31.788 0.0 0.0 2.3193 0.0 0.0 0.0 401.1528425271187 401.1528425271187 15.59054065780998 0.0 0.0 0.0 0 1.3935078169319297 0.0 0.3494850021680094 0.0 {[CP]|[EA]}YPSQKY 2.3193 - 250 1 2.095 54605.8 0.6800000071525574 4607 3540 8129 DOHH2_400M_050219_1,8149 DOHH2_400M_050219_1,8149,AEYPFSSEQKW False True AEYPFSSEQKW 45.874573 686.315966784954 1700271.625 8129.0 nc|ENSG00000017260|P98194-7|ATP2C1;;nc|ENSG00000017260|P98194-4|ATP2C1;;ENSG00000017260|ENST00000510168|ATP2C1;;nc|ENSG00000017260|P98194-2|ATP2C1;;nc|ENSG00000017260|P98194-9|ATP2C1;;nc|ENSG00000017260|P98194-3|ATP2C1;;nc|ENSG00000017260|P98194-6|ATP2C1;;nc|ENSG00000017260|P98194-5|ATP2C1;;nc|ENSG00000017260|P98194-8|ATP2C1 6.624800364176433 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8151 45.879 42.0 1292600.0 25 0 197820.0 + + 24567 MIFKRVVL 8 61 503.31735731068005 1004.62016168816 2 503.3177673220634 MULTI CID FTMS 0 0 0 8150 1089886.0 0.4263268316906624 1 -0.1139907836914062 1 Unmodified _MLFLVVKR_ ENST00000438444.5_1_7:43688212-43769049:-|nuORF;ENST00000446564.5_1_7:43688212-43769049:-|nuORF;ENST00000395879.5_2_7:43688212-43688257:-|nuORF;chr7:43648652-43648739|32|20.88|0.73|4.85|-|0|COA1,None|2;ENST00000415076.6_1_7:43688212-43769078:-|nuORF 13.50788311687929 0.7113601687236069 1 M{I|L}{M(Oxidation (M))|F}K 4 -1 56.186 0.0 0.0 5.5927 0.0 0.0 0.0 482.3105867975219 482.3105867975219 45.34816983453236 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 M{I|L}{M(Oxidation (M))|F}K 5.5927 - 24 + 1 2.095 48178.2 1.0 4608 3541 8150 DOHH2_400M_050219_1,8151 DOHH2_400M_050219_1,8151,MLFLVVKR False False MIFKRVVL 45.879342 503.317767322063 34120228.0 8150.0 ENST00000438444.5_1_7:43688212-43769049:-|nuORF;;ENST00000446564.5_1_7:43688212-43769049:-|nuORF;;ENST00000395879.5_2_7:43688212-43688257:-|nuORF;;chr7:43648652-43648739|32|20.88|0.73|4.85|-|0|COA1,None|2;;ENST00000415076.6_1_7:43688212-43769078:-|nuORF 3.049706220626831 2.0 False 8.0 True non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_1 8152 45.881 64.0 353870.0 25 0 36783.0 -1 VICYILNRL 9 55 582.33515182217 1162.65575071114 2 582.3355590701103 MULTI CID FTMS 0 0 0 8150 871317.125 0.9019914294123472 1 -0.1139907836914062 2 Carbamidomethyl (C) _VIC(Carbamidomethyl (C))YILNRL_ nc|ENSG00000065534|Q15746-3|MYLK;nc|ENSG00000065534|Q15746-4|MYLK 0.6014990680409731 0.8936861360942873 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.095 26604.7 1.0 4609 3541 8150 DOHH2_400M_050219_1,8152 DOHH2_400M_050219_1,8152,VICYILNRL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8153 45.883 96.0 760040.0 25 0 77918.0 + 41000 VMAPRTVLL 9 81 500.3044714417434 998.5943899502868 2 500.3046752810478 MULTI CID FTMS 0 0 0 8150 601153.5 0.0637340819451297 -2 0.226531982421875 3 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 36.506200033944 0.094635877243972 1 VMA 3 6 55.445 0.0 0.0 5.5523 0.0 0.0 0.0 694.4265060901032 694.4265060901032 18.46279041616178 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMA 5.5523 + + 60 + 1 2.095 60574.1 1.0 4610 3541 8150 DOHH2_400M_050219_1,8153 DOHH2_400M_050219_1,8153,VMAPRTVLL True True VMAPRTVLL 45.882983 500.304675281048 170815152.0 8150.0 ENSG00000234745|ENST00000412585|HLA-B;;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;;ENST00000498007.1_1_6:31324459-31324935:-|nuORF 4.238728364308675 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8154 45.885 97.0 530830.0 25 0 50796.0 + 29245 QGYLRSVF 8 78 485.2616912278871 968.5088295225742 2 485.2614318728447 MULTI CID FTMS 0 0 0 8150 407273.4375 0.5468157160024768 -1 0.08746337890625 4 Unmodified _QGYLRSVF_ ENSG00000089009|ENST00000202773|RPL6;ENST00000431036.1_1_22:45298215-45298323:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF 13.042465956692816 0.7182358012947757 1 [AG]GY{I|L} 5 6 31.997 0.0 0.0 3.3037 0.0 0.0 0.0 504.2585543268188 504.2585543268188 15.006823015238908 0.0 0.0 0.0 0 0.4829535345634596 1.0969100130080565 0.0 0.0 [AG]GY{I|L} 3.3037 - 46 + 1 2.095 45579.0 1.0 4611 3541 8150 DOHH2_400M_050219_1,8154 DOHH2_400M_050219_1,8154,QGYLRSVF False True QGYLRSVF 45.885073 485.261431872845 4104887.75 8150.0 ENST00000431036.1_1_22:45298215-45298323:+|nuORF;;ENST00000489915.1_1_18:6462145-6462637:-|nuORF;;ENSG00000089009|ENST00000202773|RPL6 6.704254468282064 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8155 45.887 76.0 621340.0 25 0 38722.0 + 23354 LTDIFQHDTY 10 81 626.7946445791517 1251.5747362251034 2 626.7958251833916 MULTI CID FTMS 0 0 0 8150 321814.5625 0.714998684988512 -1 0.08746337890625 5 Unmodified _LTDIFQHDTY_ ENSG00000164366|ENST00000296824|CCDC127 53.40400417844725 0.0601721406801337 1 {I|L}TD{I|L}{M(Oxidation (M))|F}Q 6 4 65.974 0.0 0.0 5.2713 0.0 0.0 0.0 531.1865938775999 531.1865938775999 31.74214829792109 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 + {I|L}TD{I|L}{M(Oxidation (M))|F}Q 5.2713 + + 439 + 1 2.095 42637.9 1.0 4612 3541 8150 DOHH2_400M_050219_1,8155 DOHH2_400M_050219_1,8155,LTDIFQHDTY True True LTDIFQHDTY 45.886844 626.795825183392 5913487.0 8150.0 ENSG00000164366|ENST00000296824|CCDC127 8.774273554484049 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8156 45.89 180.0 488840.0 25 0 64547.0 + 2871 AVDPRFLAY 9 89 526.2820746812129 1050.5495964292256 2 526.2822143435478 MULTI CID FTMS 0 0 0 8150 334059.21875 0.4141327742085647 -1 0.08746337890625 6 Unmodified _AVDPRFLAY_ ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8 29.081581746732265 0.1611639662936252 1 [RP]{M(Oxidation (M))|F}{I|L}ADVAY 9 6 + 47.841 0.0 0.0 4.5539 4.5539 79.019 0.0 0.0 0.0 1.9627248839266545 6.158650111567638 1.9627248839266545 6.020599913279625 0 0.9247425010840048 0.0 0.0 0.0 [RP]{M(Oxidation (M))|F}{I|L}ADVAY;[RP]{M(Oxidation (M))|F}{I|L}DAVAY;[RP]{M(Oxidation (M))|F}{I|L}AA[DV]Y;[RP]{M(Oxidation (M))|F}{I|L}D[Q{I|L}]Y 4.5539;3.9808;3.1528;1.963 -;-;-;- 207 1 2.095 76407.3 1.0 4613 3541 8150 DOHH2_400M_050219_1,8156 DOHH2_400M_050219_1,8156,AVDPRFLAY False True AVDPRFLAY 45.890354 526.282214343548 4266092.5 8150.0 nc|ENSG00000100888|Q9HCK8-2|CHD8;;ENSG00000100888|ENST00000646647|CHD8 0.9617696205774944 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8157 45.892 91.0 1234300.0 25 0 172170.0 7661 EKKKTYIMKP 10 63 633.3691247518561 1264.7236965705122 2 633.3692504763603 MULTI CID FTMS 0 0 0 8150 216716.46875 0.206486778216157 -5 0.5556373596191406 7 Unmodified _EKKKTYIMKP_ ENST00000272793.9_1_2:170938445-170938493:+|nuORF 3.2813086475875832 0.7114585191678878 1 D 1 10 11.237 0.0 0.0 0.8885 0.0 0.0 686.3606529978285 460.3077441646139 1146.6683971624425 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D 0.8885 - 11 + 1 2.095 87682.4 1.0 4614 3541 8150 DOHH2_400M_050219_1,8157 DOHH2_400M_050219_1,8157,EKKKTYIMKP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8158 45.897 233.0 269360.0 25 0 29534.0 -1 QMELLGMASKL 11 109 418.2140030399359 1251.6201797200076 3 418.2139160037041 MULTI CID FTMS 0 0 0 8150 278010.625 1.0 0 0.0 8 2 Oxidation (M) _QM(Oxidation (M))ELLGM(Oxidation (M))ASKL_ ENST00000524031.1_1_6:109739377-109752485:-|nuORF 4.406150317652783 0.8543594311449257 1 V{I|L}{I|L}K{I|L} 5 -1 26.696 0.0 0.0 2.1329 0.0 0.0 667.1923975928577 0.0 667.1923975928577 0.0 15.276338311870925 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 V{I|L}{I|L}K{I|L} 2.1329 - 48 + 1 2.095 57989.9 1.0 4615 3541 8150 DOHH2_400M_050219_1,8158 DOHH2_400M_050219_1,8158,QMELLGMASKL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8159 45.902 262.0 378790.0 25 0 84799.0 + 14374 IFCGAFSP 8 94 421.1978223925311 840.3810918518622 2 421.1977111697197 MULTI CID FTMS 0 0 0 8150 274465.96875 0.6178496265534946 -1 0.08746337890625 9 Unmodified _IFCGAFSP_ REV__ENST00000216268.5_1_22:50280822-50281059:+|nuORF 14.581692164780916 0.6954967302934248 1 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HDY 6 -1 + 41.724 0.0 0.0 4.9649 4.9649 78.908 0.0 0.0 0.0 11.17819920856141 4.151603310239906 4.151603310239906 4.151603310239906 0 0.2887254899964357 0.0 0.2742275032520141 0.0 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HDY;{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}YDH;{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}DH;{I|L}{M(Oxidation (M))|F}[QA]{[CP]|[EA]}Y;{I|L}{M(Oxidation (M))|F}[QA]{[YC]|[HE]}P 4.9649;4.4709;3.4622;1.5838;0.44834 -;-;-;-;- 105 + 1 2.095 81652.5 1.0 4616 3541 8150 DOHH2_400M_050219_1,8159 DOHH2_400M_050219_1,8159,IFCGAFSP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8160 45.905 177.0 354910.0 25 0 41759.0 + + -1 SRNAYMLVY 9 93 558.7770302143857 1115.5395074955711 2 558.7786743044853 MULTI CID FTMS 0 0 0 8150 234252.921875 1.0 0 0.0 10 Carbamidomethyl (C) _FRC(Carbamidomethyl (C))RCLVY_ nc|ENSG00000090686|Q86UV5-8|USP48;ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-7|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-3|USP48 19.438996006549623 0.6237395211498085 1 {[CT]|[{M(Oxidation (M))|F}G]}DQ{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VY 9 -1 + 41.366 0.0 0.0 3.7081 3.7081 73.472 0.0 0.0 0.0 30.563565498376448 5.642492736872597 5.642492736872597 3.054621874040884 0 1.805462187404089 0.0 0.0 0.0 {[CT]|[{M(Oxidation (M))|F}G]}DQ{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VY;{[CT]|[{M(Oxidation (M))|F}G]}DQK{M(Oxidation (M))|F}{I|L}VY;{[CT]|[{M(Oxidation (M))|F}G]}D[AG]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VY;[KP]C(Carbamidomethyl (C))H{[CP]|[EA]}{I|L}VY;{[CT]|[{M(Oxidation (M))|F}G]}D[AG]K{M(Oxidation (M))|F}{I|L}VY;{[CT]|[{M(Oxidation (M))|F}G]}DQKKKCY;[KP]C(Carbamidomethyl (C)){[VA]|[{I|L}G]}{I|L}QDW;{[CT]|[{M(Oxidation (M))|F}G]}[KP]E[YN]VY;[KP][CG]H{[CP]|[EA]}{I|L}VY;[KP][WK]EQDW 3.7081;3.4343;2.8827;2.6247;2.6088;2.3635;2.3395;2.049;1.7993;1.7587 -;-;-;-;-;-;-;-;-;- 282 + 1 2.095 54976.9 1.0 4617 3541 8150 DOHH2_400M_050219_1,8160 DOHH2_400M_050219_1,8160,FRCRCLVY False False SRNAYMLVY 45.905025 558.778674304485 1486048.5 8150.0 nc|ENSG00000090686|Q86UV5-8|USP48;;ENSG00000090686|ENST00000308271|USP48;;nc|ENSG00000090686|Q86UV5-7|USP48;;nc|ENSG00000090686|Q86UV5-2|USP48;;nc|ENSG00000090686|Q86UV5-3|USP48 3.197376648585001 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8161 45.91 295.0 309390.0 25 0 37345.0 + 5520 DMAPKYIL 8 101 475.7540131771918 949.4934734211836 2 475.7546874880791 MULTI CID FTMS 0 0 0 8150 219211.234375 0.9945418127723256 -1 0.08746337890625 11 Unmodified _DMAPKYIL_ ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF 46.020951573049366 0.1579632664462935 1 [MD]APKY{I|L}{I|L} 8 0 + 49.2 0.0 0.0 5.1817 5.1817 88.692 0.0 0.0 0.0 0.3412237037883443 0.3412237037883443 0.3412237037883443 21.79432249445176 0 1.548455006504028 2.0 0.0 0.3494850021680094 + + [MD]APKY{I|L}{I|L};[PA]KY[MD]{I|L}{I|L};[KP]AY[MD]{I|L}{I|L};[KP]YA[MD]{I|L}{I|L};[PA]K[MD]Y{I|L}{I|L};[YK]PA[MD]{I|L}{I|L};[KP]A[MD]Y{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[K{I|L}][MD]{I|L}{I|L};[KP]Y[WM]{I|L}{I|L};[Y{I|L}][TP]{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{I|L} 5.1817;2.8864;2.5109;2.5109;2.0668;1.9166;1.6913;1.6444;1.4348;1.3338 +;-;-;-;-;-;-;-;-;- + 205 + 1 2.095 72659.0 1.0 4618 3541 8150 DOHH2_400M_050219_1,8161 DOHH2_400M_050219_1,8161,DMAPKYIL False True DMAPKYIL 45.910417 475.754687488079 1407893.25 8150.0 ENST00000586817.5_1_19:1089487-1094188:-|nuORF;;ENSG00000099817|ENST00000615234|POLR2E 2.474964181582133 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8162 45.924 800.0 185760.0 25 0 10894.0 + 14313 IENESDMIRNW 11 132 703.8221427622178 1405.6297325912356 2 703.8223754763603 MULTI CID FTMS 0 0 0 8150 181009.828125 1.0 0 0.0 12 Unmodified _IENESDMIRNW_ ENSG00000116266|ENST00000370008|STXBP3 91.23268551309312 0.0006158447386909 1 {I|L}ENESDM{I|L}RNW 11 0 + 145.51 0.0 0.0 10.352 10.352 91.361 0.0 0.0 0.0 36.57577319177794 6.843798115897613 6.843798115897613 6.843798115897613 0 2.443672679568534 2.0 1.5044321917401078 1.5994850021680094 + + {I|L}ENESDM{I|L}RNW;{I|L}ENESDM{I|L}RHY;{I|L}EGGESDM{I|L}RNW;{I|L}ENESDM{I|L}RGGW;{I|L}EGGESDM{I|L}RHY;{I|L}EGGESDM{I|L}RGGW;{I|L}EN{M(Oxidation (M))|F}[KS][{M(Oxidation (M))|F}V]EMY;{I|L}EN{M(Oxidation (M))|F}G[WH][WK][CS];{[QN]|[E{I|L}]|[KN]}NESDM{I|L}QSQ{I|L};{[QN]|[E{I|L}]|[KN]}NE[KC]EGGWE{I|L} 10.352;9.8654;9.7028;9.4006;9.2159;8.7534;4.7001;4.4071;4.4056;4.3897 +;-;-;-;-;-;-;-;-;- + 5665 + 1 2.095 111379.7 0.7699999809265137 4619 3541 8150 DOHH2_400M_050219_1,8162 DOHH2_400M_050219_1,8162,IENESDMIRNW True True IENESDMIRNW 45.924248 703.82237547636 1294149.75 8150.0 ENSG00000116266|ENST00000370008|STXBP3 6.284455935160319 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8163 45.933 512.0 273310.0 25 0 23770.0 + 16629 KEIDMLLKEY 10 116 427.897175294782 0 427.8971435427666 PEAK CID FTMS 0 0 0 8150 160513.40625 1.0 0 0.0 13 Unmodified _KEIDMLLKEY_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 57.10758569107544 0.0281477372195156 1 {I|L}MDE{I|L} 5 7 32.493 0.0 0.0 3.8058 0.0 0.0 124.4061537128077 125.07253442935782 249.4786881421655 0.0 0.0 0.0 0.0 0 0.0 0.0 1.055462187404089 0.0 {I|L}MDE{I|L} 3.8058 - 168 + 1 2.095 126244.3 1.0 4620 3541 8150 DOHH2_400M_050219_1,8163 DOHH2_400M_050219_1,8163,KEIDMLLKEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8164 45.943 569.0 275510.0 25 0 20791.0 + 6964 EEIFGTIGM 9 157 506.73655507890754 1011.4585572246152 2 506.7364074587822 MULTI CID FTMS 0 0 0 8150 146368.09375 0.4884295955582928 -1 0.08746337890625 14 Oxidation (M) _EEIFGTIGM(Oxidation (M))_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 81.86404211737425 0.017065112157077 1 EERP{M(Oxidation (M))|F} 5 6 33.56 0.0 0.0 3.318 0.0 0.0 0.0 350.1389781946438 350.1389781946438 5.0956966700575 0.0 0.0 0.0 0 0.805462187404089 1.2218487496163564 0.9386218330464624 0.0 EERP{M(Oxidation (M))|F} 3.318 - 751 1 2.095 122712.0 1.0 4621 3541 8150 DOHH2_400M_050219_1,8164 DOHH2_400M_050219_1,8164,EEIFGTIGM True False EEIFGTIGM 45.943229 506.736407458782 2104219.75 8150.0 ENSG00000126457|ENST00000454376|PRMT1;;nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;;nc|ENSG00000126457|Q99873-5|PRMT1 6.07622750600179 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8165 45.951 419.0 232380.0 25 0 23305.0 + 11136 GEIETIARF 9 115 518.2769152069922 1034.5392774807842 2 518.2773315310478 MULTI CID FTMS 0 0 0 8150 145667.203125 1.0 0 0.0 15 Unmodified _GEIETIARF_ ENSG00000101474|ENST00000217456|APMAP;nc|ENSG00000101474|Q9HDC9-2|APMAP 45.69961567697781 0.0497987121815769 1 {[DA]|[EG]}{I|L}ET{I|L}AR{M(Oxidation (M))|F} 9 0 + 67.831 0.0 0.0 6.5567 6.5567 92.547 0.0 0.0 0.0 32.20377464861279 9.9785615825148 9.9785615825148 15.929862658764264 0 0.8494850021680094 1.5228787452803376 0.805462187404089 0.2742275032520141 + + {[DA]|[EG]}{I|L}ET{I|L}AR{M(Oxidation (M))|F};{[DA]|[EG]}{I|L}ET[YK][VP];{[DA]|[EG]}{I|L}E{M(Oxidation (M))|F}[Q{I|L}]{[TV]|[{I|L}S]};{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}A[W{I|L}]{[TV]|[{I|L}S]};{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}E[Q{I|L}]{[TV]|[{I|L}S]};W{I|L}{M(Oxidation (M))|F}[VP]AR{M(Oxidation (M))|F};{[DA]|[EG]}{I|L}[HV]RE[VP];{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}[VP];W{I|L}{M(Oxidation (M))|F}A[R{M(Oxidation (M))|F}][VP];{[DA]|[EG]}{I|L}[HV][VG]E[VP] 6.5567;5.0169;4.4995;4.1166;4.0384;3.2187;3.1747;3.0249;2.7392;2.2846 +;-;-;-;-;-;-;-;-;- + 376 + 1 2.095 80664.7 1.0 4622 3541 8150 DOHH2_400M_050219_1,8165 DOHH2_400M_050219_1,8165,GEIETIARF True True GEIETIARF 45.950717 518.277331531048 725547.1875 8150.0 ENSG00000101474|ENST00000217456|APMAP;;nc|ENSG00000101474|Q9HDC9-2|APMAP 4.383839130401611 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8166 45.966 800.0 101380.0 25 0 7960.6 + 8478 ETDEKDFYLY 10 116 661.7931696010072 1321.5717862688143 2 661.7938110232353 MULTI CID FTMS 0 0 0 8150 139791.046875 0.0912075907289832 2 -0.2337493896484375 16 Unmodified _ETDEKDFYLY_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 34.40172386719151 0.2166836008404837 1 D{M(Oxidation (M))|F}Y{I|L}Y 5 5 29.781 0.0 0.0 2.2535 0.0 0.0 602.2406483380875 0.0 602.2406483380875 0.0 14.296831374325905 0.0 0.0 0 0.8182503180159344 0.0 1.3807196863200843 0.0 + D{M(Oxidation (M))|F}Y{I|L}Y 2.2535 + + 178 1 2.095 65459.4 0.6899999976158142 4623 3541 8150 DOHH2_400M_050219_1,8166 DOHH2_400M_050219_1,8166,ETDEKDFYLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8167 45.971 272.0 246350.0 25 0 23009.0 + 34512 SNKLHFAF 8 116 482.2560756897887 962.4975984463774 2 482.2563354372978 MULTI CID FTMS 0 0 0 8150 139731.34375 0.7162479359269766 -1 0.08746337890625 17 Unmodified _SNKLHFAF_ ENSG00000187446|ENST00000334660|CHP1 88.90359156742426 0.0528693370567628 1 [NS]K{I|L}H{M(Oxidation (M))|F}A{M(Oxidation (M))|F} 8 0 + 46.216 0.0 0.0 4.8017 4.8017 85.703 0.0 0.0 0.0 11.38806990195107 6.677353201839438 6.677353201839438 12.689737905374264 0 1.7817183090963749 0.744727494896694 1.0 0.5501648626366046 + + [NS]K{I|L}H{M(Oxidation (M))|F}A{M(Oxidation (M))|F};GGSK{I|L}H{M(Oxidation (M))|F}A{M(Oxidation (M))|F};[HV]{M(Oxidation (M))|F}[VP]{M(Oxidation (M))|F}A{M(Oxidation (M))|F};[H{I|L}]K[NS]{M(Oxidation (M))|F}A{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[TV]|[{I|L}S]}H{M(Oxidation (M))|F}A{M(Oxidation (M))|F};[NS]VV[W{I|L}][{M(Oxidation (M))|F}V];[NS]K{I|L}H[HD]{I|L};[NS]R{[QN]|[E{I|L}]|[KN]}[MT]{I|L};[NS]R{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}K[NS]A{M(Oxidation (M))|F} 4.8017;3.4832;1.7616;1.516;1.4981;1.188;0.96652;0.86935;0.50905;0.42038 +;-;-;-;-;-;-;-;-;- + 283 1 2.095 57488.8 1.0 4624 3541 8150 DOHH2_400M_050219_1,8167 DOHH2_400M_050219_1,8167,SNKLHFAF True True SNKLHFAF 45.971018 482.256335437298 1130762.0 8150.0 ENSG00000187446|ENST00000334660|CHP1 6.339615980784099 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8168 45.982 604.0 194670.0 25 0 19466.0 + 37618 TLLGHQLYV 9 162 522.2956761450827 1042.5767993569652 2 522.2946044802666 MULTI CID FTMS 0 0 0 8150 109049.8046875 0.1498446822905734 4 -0.35723876953125 18 Unmodified _TLLGHQLYV_ REV__ENSG00000204022|ENST00000371939|LIPJ 7.289230182591677 0.6602208344931196 1 Y 1 -1 12.218 0.0 0.0 1.172 0.0 0.0 861.5023192317684 0.0 861.5023192317684 0.0 0.1308097097216976 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.172 + + 113 + 1 2.095 94923.7 1.0 4625 3541 8150 DOHH2_400M_050219_1,8168 DOHH2_400M_050219_1,8168,TLLGHQLYV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8169 45.986 236.0 360170.0 25 0 46993.0 + -1 ALGSSHCCDP 10 116 552.2142164062099 1102.4138798792196 2 552.2134887576103 MULTI CID FTMS 0 0 0 8150 92727.078125 1.0 0 0.0 19 2 Carbamidomethyl (C) _ALGSSHC(Carbamidomethyl (C))C(Carbamidomethyl (C))DP_ REV__ENST00000266643.5_1_12:58150815-58152358:+|nuORF 6.723162845929126 0.6955379296933136 1 [{I|L}A]DGH{I|L}E 7 -1 26.797 0.0 0.0 2.4308 0.0 0.0 0.0 364.0335447564259 364.0335447564259 5.326385825694938 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]DGH{I|L}E 2.4308 - 359 1 2.095 67998.6 1.0 4626 3541 8150 DOHH2_400M_050219_1,8169 DOHH2_400M_050219_1,8169,ALGSSHCCDP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8170 45.989 55.0 759600.0 25 0 128790.0 7674 EKLTALTKKY 10 66 597.856461703229 1193.698370473258 2 597.8564941287041 MULTI CID FTMS 0 0 0 8150 993060.6875 0.9617313859785735 -1 0.08746337890625 20 Unmodified _EKLTALTKKY_ ENSG00000084674|ENST00000233242|APOB 1.4819007175156935 0.719781833666733 1 Y 1 9 13.099 0.0 0.0 1.0973 0.0 0.0 1012.6237377601705 0.0 1012.6237377601705 0.0 13.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.0973 + + 1 + 1 2.095 38201.2 1.0 4627 3541 8150 DOHH2_400M_050219_1,8170 DOHH2_400M_050219_1,8170,EKLTALTKKY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8172 45.994 76.0 623680.0 25 0 69362.0 + 41823 VPYEKGFAL 9 76 512.2793514148067 1022.5441498964134 2 512.2794677615166 MULTI CID FTMS 0 0 0 8171 534158.3125 0.441094715802221 1 -0.1197586059570312 1 Unmodified _VPYEKGFAL_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 24.020572477871973 0.2255576514309169 1 VPYE 4 5 48.22 0.0 0.0 4.7157 0.0 0.0 0.0 531.2950533502561 531.2950533502561 18.526909627198407 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + VPYE 4.7157 + + 86 + 1 2.09 44803.4 1.0 4628 3542 8171 DOHH2_400M_050219_1,8172 DOHH2_400M_050219_1,8172,VPYEKGFAL False True VPYEKGFAL 45.994189 512.279467761517 17361862.0 8171.0 ENST00000548375.5_1_12:96405582-96408866:-|nuORF;;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;;nc|ENSG00000111144|P09960-4|LTA4H;;nc|ENSG00000111144|P09960-2|LTA4H;;nc|ENSG00000111144|P09960-3|LTA4H;;ENSG00000111144|ENST00000228740|LTA4H 8.106525421142578 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8173 45.997 127.0 306050.0 25 0 30456.0 + 33154 SEVPGSIPNSW 11 81 586.7829913913413 1171.5514298494825 2 586.7835571169853 MULTI CID FTMS 0 0 0 8171 222740.953125 0.2980145230282014 3 -0.2432479858398437 2 Unmodified _SEVPGSIPNSW_ ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-2|MLH1;nc|ENSG00000076242|P40692-3|MLH1 28.49450938151212 0.4231428536161201 1 {I|L}[NP]SW 5 6 16.995 0.0 0.0 1.4506 0.0 0.0 556.2457180348325 0.0 556.2457180348325 0.0 4.54750954047803 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.4247425010840047 + {I|L}[NP]SW 1.4506 + + 91 + 1 2.09 36485.4 1.0 4629 3542 8171 DOHH2_400M_050219_1,8173 DOHH2_400M_050219_1,8173,SEVPGSIPNSW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8174 45.998 71.0 831430.0 25 0 164870.0 + 1206 AIDQLHLEY 9 69 551.282380371343 1100.550207809486 2 551.2823974490166 MULTI CID FTMS 0 0 0 8171 686773.3125 0.9624633636059304 -1 0.1139907836914062 3 Unmodified _AIDQLHLEY_ ENSG00000130402|ENST00000252699|ACTN4;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4 43.85829265575387 0.0542763391141878 1 [H{I|L}]EN{I|L}EY[{I|L}A] 9 7 + 53.082 0.0 0.0 4.8232 4.8232 78.455 0.0 0.0 0.0 3.601292910313348 37.59758745913771 3.601292910313348 4.264771768807592 0 0.0 1.2218487496163564 0.5 0.0 [H{I|L}]EN{I|L}EY[{I|L}A];[{I|L}A]DGH{I|L}EY[{I|L}A];[H{I|L}]EGG{I|L}EY[{I|L}A];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}H{I|L}EY[{I|L}A];{[DS]|[MA]|[CV]|TT}PGH{I|L}EY[{I|L}A];[H{I|L}]{I|L}{[MG]|[TS]}[MT]D[{I|L}A] 4.8232;4.4357;3.9865;2.5516;1.4571;0.75984 -;-;-;-;-;- 235 1 2.09 50246.8 1.0 4630 3542 8171 DOHH2_400M_050219_1,8174 DOHH2_400M_050219_1,8174,AIDQLHLEY True True AIDQLHLEY 45.998476 551.282397449017 4844636.0 8171.0 nc|ENSG00000130402|O43707-3|ACTN4;;ENSG00000130402|ENST00000252699|ACTN4;;nc|ENSG00000130402|O43707-2|ACTN4 6.754385789235433 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8175 46.002 158.0 616050.0 25 0 25832.0 + 15728 IRKPYIWEY 9 107 634.3454031461389 1266.6762533590777 2 634.3459350466728 MULTI CID FTMS 0 0 0 8171 363953.25 0.5093145961252309 -1 0.1139907836914062 4 Unmodified _IRKPYIWEY_ ENSG00000136628|ENST00000366923|EPRS1 41.8396318013385 0.0653578398400075 1 {I|L}EGEY 5 6 36.472 0.0 0.0 2.8794 0.0 0.0 657.3985600050256 0.0 657.3985600050256 0.0 21.03917193908117 0.0 0.0 0 0.9049471895720984 0.0 0.0 0.0 {I|L}EGEY 2.8794 - 452 1 2.09 76432.8 1.0 4631 3542 8171 DOHH2_400M_050219_1,8175 DOHH2_400M_050219_1,8175,IRKPYIWEY True True IRKPYIWEY 46.001606 634.345935046673 9784067.0 8171.0 ENSG00000136628|ENST00000366923|EPRS1 7.139183521270752 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8176 46.004 131.0 474590.0 25 0 49744.0 + 15729 IRKPYIWEY 9 102 423.2327521407154 1266.6764270223464 3 423.2329284548759 MULTI CID FTMS 0 0 0 8171 313869.53125 0.4230567146807618 -1 0.1139907836914062 5 Unmodified _IRKPYIWEY_ ENSG00000136628|ENST00000366923|EPRS1 19.256988751693697 0.3154191944385105 1 {I|L}EGEY 5 6 33.418 0.0 0.0 2.6382 0.0 0.0 657.3991040359289 0.0 657.3991040359289 0.0 17.21971276399756 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 {I|L}EGEY 2.6382 - 103 1 2.09 53474.3 1.0 4632 3542 8171 DOHH2_400M_050219_1,8176 DOHH2_400M_050219_1,8176,IRKPYIWEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8177 46.007 157.0 378590.0 25 0 21919.0 + 38490 TSETPDYLLKY 11 87 665.3327392817588 1328.6509256303175 2 665.3320190310478 MULTI CID FTMS 0 0 0 8171 297415.5625 0.9650804331886012 -1 0.1139907836914062 6 Unmodified _TSETPDYLLKY_ ENSG00000105656|ENST00000262809|ELL 57.24910588100465 0.0803095280301687 1 {[MG]|[TS]}ET[DP]Y{I|L}{I|L}KY 11 0 + 43.575 0.0 0.0 3.2796 3.2796 83.751 0.0 0.0 0.0 0.1792586303983512 9.929805732080226 0.1792586303983512 43.5749682639311 0 1.1307196863200843 0.0 0.0 0.3252574989159953 + + {[MG]|[TS]}ET[DP]Y{I|L}{I|L}KY 3.2796 + + 533 + 1 2.09 47968.9 1.0 4633 3542 8171 DOHH2_400M_050219_1,8177 DOHH2_400M_050219_1,8177,TSETPDYLLKY True True TSETPDYLLKY 46.007378 665.332019031048 2254183.0 8171.0 ENSG00000105656|ENST00000262809|ELL 8.106054147084555 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8178 46.011 208.0 215430.0 25 0 17410.0 + 6784 EEAELQQVL 9 102 529.7716210964073 0 529.7715942263603 PEAK CID FTMS 0 0 0 8171 260634.90625 1.0 0 0.0 7 Unmodified _EEAELQQVL_ ENSG00000076513|ENST00000261739|ANKRD13A 71.13359017698441 0.0166968128596244 1 QQ{I|L}EE 5 8 40.165 0.0 0.0 3.798 0.0 0.0 230.1602333043396 197.0572298639281 427.2174631682677 0.0 0.0 0.0 0.0 0 0.5 0.0 1.924742501084005 0.0 QQ{I|L}EE 3.798 - 218 + 1 2.09 43810.4 1.0 4634 3542 8171 DOHH2_400M_050219_1,8178 DOHH2_400M_050219_1,8178,EEAELQQVL True True EEAELQQVL 46.011345 529.77159422636 1158749.375 8171.0 ENSG00000076513|ENST00000261739|ANKRD13A 5.9885783195495605 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8179 46.013 96.0 665140.0 25 0 52232.0 + 32751 SEDGTVRLW 9 94 531.7636751715585 1061.5127974099169 2 531.7640258669853 MULTI CID FTMS 0 0 0 8171 167911.859375 1.0 0 0.0 8 Unmodified _SEDGTVRLW_ ENSG00000148835|ENST00000369839|TAF5 60.07390631473393 0.0260411565414776 1 {[ES]|[DT]|[{I|L}C]}DGTVR{I|L}W 9 0 + 55.326 0.0 0.0 5.212 5.212 79.101 0.0 0.0 0.0 7.147642715192504 3.679767852945943 3.679767852945943 3.679767852945943 0 1.1677353201839438 0.0 0.75 0.3807196863200844 + + {[ES]|[DT]|[{I|L}C]}DGTVR{I|L}W;{[ES]|[DT]|[{I|L}C]}DGTVRW{I|L};[VG]DT{I|L}RW{[ES]|[DT]|[{I|L}C]};[VG]DT{I|L}RAD{[ES]|[DT]|[{I|L}C]};[VG]DT{I|L}[VG]W{[ES]|[DT]|[{I|L}C]};[VG]DT{I|L}[VG]C[W{I|L}];[VG]DT{I|L}[VG]AD{[ES]|[DT]|[{I|L}C]};[VG]{[TV]|[{I|L}S]}ERW{[ES]|[DT]|[{I|L}C]};{NN|[MP]|[D{I|L}]|[EV]}KERC[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}KERW{[ES]|[DT]|[{I|L}C]} 5.212;4.8654;2.721;2.6779;1.8535;1.8535;1.8145;1.7051;1.6787;1.6787 +;-;-;-;-;-;-;-;-;- + 631 + 1 2.09 53222.1 1.0 4635 3542 8171 DOHH2_400M_050219_1,8179 DOHH2_400M_050219_1,8179,SEDGTVRLW True True SEDGTVRLW 46.013445 531.7649 2685778.5 8171.0 ENSG00000148835|ENST00000369839|TAF5 6.401350180308024 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8180 46.021 427.0 110040.0 25 0 11729.0 -1 0 79 953.1288631754326 2856.364760126497 3 953.4633056521416 MULTI CID FTMS 0 0 0 8171 193051.296875 1.0 0 0.0 9 1 {[QV]|[N{I|L}]|[RA]|[KV]}PNW 5 -1 40.942 0.0 0.0 1.4334 0.0 0.0 0.0 2229.053760941204 2229.053760941204 30.76483730104272 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}PNW 1.4334 - 167 1 2.09 37011.6 1.0 4636 3542 8171 DOHH2_400M_050219_1,8180 DOHH2_400M_050219_1,8180, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8181 46.035 800.0 129870.0 25 0 50134.0 20685 LLRLGLHGVLW 11 86 638.8954595101345 1275.776366087069 2 638.8956176638603 MULTI CID FTMS 0 0 0 8171 190736.890625 0.9878771982951796 1 -0.1197586059570312 10 Unmodified _LLRLGLHGVLW_ ENSG00000134109|ENST00000256497|EDEM1;ENST00000443790.1_1_3:5229490-5231099:+|nuORF 1.4819007175156935 0.86815623132643 1 W 1 10 11.783 0.0 0.0 0.92357 0.0 0.0 1071.685787939411 0.0 1071.685787939411 0.0 0.1889428044469987 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 0.92357 + + 21 + 1 2.09 84649.6 0.7799999713897705 4637 3542 8171 DOHH2_400M_050219_1,8181 DOHH2_400M_050219_1,8181,LLRLGLHGVLW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8182 46.039 233.0 332820.0 25 0 41711.0 + 40614 VLARSRQRY 9 87 574.8364228033444 1147.6582926734886 2 574.8380615115166 MULTI CID FTMS 0 0 0 8171 171239.875 0.5616580140935298 1 -0.1197586059570312 11 Unmodified _VLARSRQRY_ REV__ENSG00000114378|ENST00000395144|HYAL1;REV__nc|ENSG00000114378|Q12794-2|HYAL1;REV__nc|ENSG00000114378|Q12794-4|HYAL1;REV__nc|ENSG00000114378|Q12794-7|HYAL1 2.302733041254933 0.8342969208511092 1 Y 1 -1 12.764 0.0 0.0 1.1122 0.0 0.0 966.5837057367684 0.0 966.5837057367684 0.0 10.774509799928715 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1122 + + 18 + 1 2.09 63838.7 1.0 4638 3542 8171 DOHH2_400M_050219_1,8182 DOHH2_400M_050219_1,8182,VLARSRQRY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8183 46.053 800.0 364510.0 25 0 28898.0 + 7127 EEMPATKGGFSF 12 150 650.7968863705026 1299.5792198078052 2 650.7963134646416 MULTI CID FTMS 0 0 0 8171 127576.4296875 0.1767411124988906 -2 0.2014541625976562 12 Unmodified _EEMQSNVEVVH_ nc|ENSG00000124789|P49790-2|NUP153;ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-3|NUP153 20.41453444215458 0.6105011870913812 1 EEMPAT 6 8 62.823 0.0 0.0 4.8341 0.0 0.0 0.0 638.2959666156975 638.2959666156975 6.1385605238702965 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 1.1307196863200843 0.0 EEMPAT 4.8341 - 4153 + 1 2.09 214907.1 0.6499999761581421 4639 3542 8171 DOHH2_400M_050219_1,8183 DOHH2_400M_050219_1,8183,EEMQSNVEVVH False False EEMPATKGGFSF 46.053137 650.796313464642 9645554.0 8171.0 nc|ENSG00000124789|P49790-2|NUP153;;ENSG00000124789|ENST00000262077|NUP153;;nc|ENSG00000124789|P49790-3|NUP153 7.031325022379558 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8184 46.061 414.0 164070.0 25 0 14719.0 + 32862 SEHSRHWFF 9 110 411.5247988466696 1231.5525671402088 3 411.5245849490166 MULTI CID FTMS 0 0 0 8171 116407.3125 1.0 0 0.0 13 Unmodified _SEHSRHWFF_ ENSG00000178921|ENST00000314666|PFAS;ENST00000580356.5_1_17:8159124-8159921:+|nuORF 13.90604991867851 0.4602628045680013 1 WHW{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5 5 24.565 0.0 0.0 1.9946 0.0 0.0 410.1898365705094 0.0 410.1898365705094 0.0 9.960762528683702 0.0 0.0 0 0.535666875892183 0.0 0.0 0.0 WHW{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.9946 - 96 1 2.09 55746.5 1.0 4640 3542 8171 DOHH2_400M_050219_1,8184 DOHH2_400M_050219_1,8184,SEHSRHWFF False True SEHSRHWFF 46.060524 411.524584949017 544180.8125 8171.0 ENST00000580356.5_1_17:8159124-8159921:+|nuORF;;ENSG00000178921|ENST00000314666|PFAS 5.475281556447347 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8185 46.074 716.0 170630.0 25 0 10663.0 + -1 FLNQRSIML 9 161 569.307818193701 1136.601083454202 2 569.3079711794853 MULTI CID FTMS 0 0 0 8171 95798.828125 1.0 0 0.0 14 Oxidation (M) _FLNQRSIM(Oxidation (M))L_ ENST00000506111.1_1_4:38777424-38777628:-|nuORF;ENST00000308973.8_1_4:38777424-38777762:-|nuORF 29.84058131909904 0.1515068451768857 1 {M(Oxidation (M))|F}{I|L}NQR{[TV]|[{I|L}S]}PY 9 -1 + 55.372 0.0 0.0 4.8717 4.8717 81.704 0.0 0.0 0.0 12.36880000633434 7.7815125038364386 7.7815125038364386 7.7815125038364386 0 1.1549471895720984 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}NQR{[TV]|[{I|L}S]}PY;{M(Oxidation (M))|F}{I|L}NQR{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}{I|L}NQ[VG]{[TV]|[{I|L}S]}PY;{M(Oxidation (M))|F}{I|L}N[AG]R{[TV]|[{I|L}S]}PY;{M(Oxidation (M))|F}{I|L}GGQR{[TV]|[{I|L}S]}PY;{M(Oxidation (M))|F}{I|L}NQ{NN|[MP]|[D{I|L}]|[EV]}KPY;{M(Oxidation (M))|F}{I|L}NQR[YT][VP];{M(Oxidation (M))|F}{I|L}NQ{[TV]|[{I|L}S]}[VG]PY;{M(Oxidation (M))|F}{I|L}NQ[VG]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}{I|L}N[AG]R{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L} 4.8717;4.1871;4.0616;4.0616;4.0616;3.6182;3.5139;3.423;3.3769;3.3769 -;+;-;-;-;-;-;-;-;- + 596 + 1 2.09 90654.8 1.0 4641 3542 8171 DOHH2_400M_050219_1,8185 DOHH2_400M_050219_1,8185,FLNQRSIML False False FLNQRSIML 46.074128 569.307971179485 784394.3125 8171.0 ENST00000506111.1_1_4:38777424-38777628:-|nuORF;;ENST00000308973.8_1_4:38777424-38777762:-|nuORF 5.49854056040446 2.0 True 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 8186 46.088 800.0 120880.0 25 0 9143.4 -1 0 106 873.914534500172 1745.8145160671438 2 874.4184448122978 MULTI CID FTMS 0 0 0 8171 90944.0 1.0 0 0.0 15 1 [MN]PN{I|L}NEG[HT]{I|L}SN{I|L} 14 -1 80.632 0.0 0.0 4.6186 0.0 0.0 0.0 208.0731600397094 208.0731600397094 60.68336434696981 0.0 0.0 0.0 0 0.6237125054200234 1.5228787452803376 0.2302046884880938 0.6421590589602533 [MN]PN{I|L}NEG[HT]{I|L}SN{I|L} 4.6186 - 6563 + 1 2.09 69285.8 0.4900000095367431 4642 3542 8171 DOHH2_400M_050219_1,8186 DOHH2_400M_050219_1,8186, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8187 46.093 290.0 214100.0 25 0 33154.0 20766 LLTDLKTL 8 93 458.7882241808673 915.5618954285346 2 458.7879516482353 MULTI CID FTMS 0 0 0 8171 86650.4453125 0.042368209539179 4 -0.3372116088867187 16 Unmodified _LLTDLKTL_ ENSG00000261609|ENST00000648994|GAN 9.347437153973935 0.7675937258251505 1 {I|L}{I|L}TM 4 5 16.375 0.0 0.0 1.7885 0.0 0.0 0.0 454.2931020537878 454.2931020537878 5.116115387519251 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {I|L}{I|L}TM 1.7885 - 51 1 2.09 54170.5 1.0 4643 3542 8171 DOHH2_400M_050219_1,8187 DOHH2_400M_050219_1,8187,LLTDLKTL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8188 46.108 800.0 239230.0 25 0 24496.0 + -1 LMIKFFRIK 9 150 606.3696440129366 1210.7247350926732 2 606.3704711794853 MULTI CID FTMS 0 0 0 8171 145329.8125 1.0 0 0.0 17 Oxidation (M) _LM(Oxidation (M))IKFFRIK_ REV__ENSG00000101850|ENST00000467482|GPR143 8.593279151180031 0.6146971463335029 1 {I|L}{I|L}{M(Oxidation (M))|F}K[C(Carbamidomethyl (C))H]AD{I|L} 9 -1 46.661 0.0 0.0 3.8539 0.0 0.0 0.0 110.15953633788482 110.15953633788482 16.395520021896104 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {I|L}{I|L}{M(Oxidation (M))|F}K[C(Carbamidomethyl (C))H]AD{I|L} 3.8539 - 709 1 2.09 138663.6 0.6100000143051147 4644 3542 8171 DOHH2_400M_050219_1,8188 DOHH2_400M_050219_1,8188,LMIKFFRIK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8190 46.113 29.0 1675800.0 25 0 323960.0 + 2502 ARGPIQIL 8 78 434.2743736819685 866.5341944307371 2 434.2743713259697 MULTI CID FTMS 0 0 0 8189 1671634.875 0.4121249317007041 1 -0.0695533752441406 1 Unmodified _ARGPIQIL_ ENSG00000047315|ENST00000314595|POLR2B 19.438996006549623 0.6237395211498085 1 {I|L}{I|L} 2 6 21.454 0.0 0.0 2.4758 0.0 0.0 622.354672801634 0.0 622.354672801634 0.0 10.996075289514094 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 2.4758 + + 30 + 1 2.09 42581.1 1.0 4645 3543 8189 DOHH2_400M_050219_1,8190 DOHH2_400M_050219_1,8190,ARGPIQIL False True ARGPIQIL 46.11309 434.27437132597 26017026.0 8189.0 ENSG00000047315|ENST00000314595|POLR2B 2.3441964785257974 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8191 46.114 23.0 2006000.0 25 0 451110.0 + -1 WQLTMKKKV 9 69 589.3433184242272 1176.6720839152542 2 589.3436157107353 MULTI CID FTMS 0 0 0 8189 2431730.25 0.7412560868158377 1 -0.0695533752441406 2 Oxidation (M) _WQLTM(Oxidation (M))KKKV_ REV__ENST00000466094.5_1_7:107220736-107227893:+|nuORF;REV__ENST00000486326.5_1_7:107220736-107234551:+|nuORF 0.6014990680409731 0.8936861360942873 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.09 38045.7 1.0 4646 3543 8189 DOHH2_400M_050219_1,8191 DOHH2_400M_050219_1,8191,WQLTMKKKV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8192 46.116 55.0 1434400.0 25 0 210390.0 + 44080 YIYDEQGKLA 10 58 600.3012749047432 1198.5879968762863 2 600.3016845583916 MULTI CID FTMS 0 0 0 8189 989187.625 0.7573316701737972 -1 0.1197586059570312 3 Unmodified _YIYDEQGKLA_ REV__ENSG00000213160|ENST00000392647|KLHL23 16.149105407346934 0.5765757077271437 1 Y{I|L}YEDEV[R{I|L}] 9 -1 + 77.898 0.0 0.0 6.4991 6.4991 94.268 0.0 0.0 0.0 58.2319095436452 3.2568864632742844 3.2568864632742844 38.29812217439503 0 0.4247425010840047 2.0 0.3807196863200844 0.0 Y{I|L}YEDEV[R{I|L}];Y{I|L}EE{[YD]|[{M(Oxidation (M))|F}M]}V[R{I|L}] 6.4991;3.3039 -;- 69 + 1 2.09 63003.5 1.0 4647 3543 8189 DOHH2_400M_050219_1,8192 DOHH2_400M_050219_1,8192,YIYDEQGKLA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8193 46.117 53.0 1248600.0 25 0 82962.0 + + 39758 EEVDLSKDIQHW 12 77 749.8625887586494 1497.7106245840987 2 749.8627197146416 MULTI CID FTMS 0 0 0 8189 890684.1875 0.5232961855675176 -1 0.1197586059570312 4 Unmodified _VELMQQLWEWH_ ENSG00000171848|ENST00000304567|RRM2;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 15.248480904072842 0.7179608125786238 1 EEVD{I|L}SKD{I|L}QHW 12 -1 + 109.85 0.0 0.0 7.3345 7.3345 88.923 0.0 0.0 0.0 15.70551508934794 7.2184874961635614 7.2184874961635614 7.2184874961635614 0 2.9489700043360187 1.6989700043360187 0.0 0.3807196863200844 EEVD{I|L}SKD{I|L}QHW;EEVD{I|L}SKD{I|L}QWH;EEVD{I|L}SKD{I|L}[AG]HW;EEV[KP]DKS{I|L}MH{[DA]|[EG]};EEVD{I|L}SKD{I|L}[AG]WH;EEVD[KP]KS{I|L}MH{[DA]|[EG]};EEVD[KP]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}QH{[DA]|[EG]};EEV[{I|L}T]H{[CT]|[{M(Oxidation (M))|F}G]}{I|L}MHW;{[CT]|[{M(Oxidation (M))|F}G]}HQ{I|L}DKS{I|L}MHW;EEV[KP][W{M(Oxidation (M))|F}]{I|L}QHW 7.3345;6.8525;6.4728;6.2859;5.9908;5.9018;5.6705;5.609;5.511;5.2369 -;-;-;-;-;-;-;-;-;- 1465 + 1 2.09 53873.6 1.0 4648 3543 8189 DOHH2_400M_050219_1,8193 DOHH2_400M_050219_1,8193,VELMQQLWEWH False False EEVDLSKDIQHW 46.117084 749.862719714642 8877832.0 8189.0 ENSG00000171848|ENST00000304567|RRM2;;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;;nc|ENSG00000171848|P31350-2|RRM2 9.900602658589682 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8194 46.119 98.0 530270.0 25 0 85030.0 + 31741 RRVERPFAT 9 85 566.3218601988744 1130.6291674645488 2 566.3222534060478 MULTI CID FTMS 0 0 0 8189 485914.25 0.4582331851907036 3 -0.2174530029296875 5 Unmodified _RRVERPFAT_ REV__ENSG00000187605|ENST00000409262|TET3;REV__nc|ENSG00000187605|O43151-2|TET3 2.059750862983233 0.8427793054688888 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 11 1 2.09 43082.0 1.0 4649 3543 8189 DOHH2_400M_050219_1,8194 DOHH2_400M_050219_1,8194,RRVERPFAT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8195 46.122 152.0 524530.0 25 0 74612.0 14214 IDLVLAASRE 10 94 543.8096986440046 1085.604844354809 2 544.3096191287041 MULTI CID FTMS 0 0 0 8189 443314.96875 0.7496452864822258 -2 0.2337493896484375 6 Unmodified _IDLVLAASRE_ ENSG00000151779|ENST00000281513|NBAS;nc|ENSG00000151779|A2RRP1-2|NBAS 5.731851221503515 0.7001233259664787 1 {I|L} 1 9 9.8329 0.0 0.0 0.90575 0.0 0.0 954.5098106407452 0.0 954.5098106407452 0.0 2.843181179205061 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.90575 + + 22 + 1 2.09 65984.9 1.0 4650 3543 8189 DOHH2_400M_050219_1,8195 DOHH2_400M_050219_1,8195,IDLVLAASRE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8196 46.125 145.0 600910.0 25 0 88842.0 + 19933 LIDADPYLKY 10 80 605.8216701483273 1209.6287873634544 2 605.8216430544853 MULTI CID FTMS 0 0 0 8189 403071.1875 0.3987082970403672 -2 0.2337493896484375 7 Unmodified _LIDADPYLKY_ ENSG00000145386|ENST00000274026|CCNA2 43.9818466556824 0.1155196613165264 1 {I|L}{I|L}DADPY{I|L}KY 10 0 + 97.516 0.0 0.0 8.0616 8.0616 96.895 0.0 0.0 0.0 62.1099511878171 12.306634937682162 12.306634937682162 25.019344997771995 0 1.2614393726401687 2.0 0.4247425010840047 0.0 + + {I|L}{I|L}DADPY{I|L}KY;{I|L}{I|L}D{[CT]|[{M(Oxidation (M))|F}G]}YK{I|L}{[QN]|[E{I|L}]|[KN]} 8.0616;5.9933 +;- + 457 + 1 2.09 66007.5 1.0 4651 3543 8189 DOHH2_400M_050219_1,8196 DOHH2_400M_050219_1,8196,LIDADPYLKY True True LIDADPYLKY 46.125153 605.821643054485 11273086.0 8189.0 ENSG00000145386|ENST00000274026|CCNA2 7.369585990905762 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8197 46.128 133.0 426690.0 25 0 26462.0 + 25428 NEEGFVRLY 9 84 563.7810502571488 1125.5475475810974 2 563.7801391482353 MULTI CID FTMS 0 0 0 8189 376057.25 0.4183518944089273 1 -0.0695533752441406 8 Unmodified _NEEGFVRLY_ ENSG00000143476|ENST00000366991|DTL;nc|ENSG00000143476|Q9NZJ0-2|DTL 37.07464296494664 0.0915153923251136 1 {[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}GVRY{I|L} 9 4 + 67.177 0.0 0.0 5.9684 5.9684 79.476 0.0 0.0 0.0 7.147642715192504 1.7659970366415934 1.7659970366415934 1.7659970366415934 0 1.6549471895720984 0.0 0.3807196863200844 0.4247425010840047 {[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}GVRY{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}GVR{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}EG{M(Oxidation (M))|F}VRY{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}EG{M(Oxidation (M))|F}VR{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}RRY{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}RR{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}GV[VG]Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}GV[VG]{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}EG{M(Oxidation (M))|F}V[VG]Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}EG{M(Oxidation (M))|F}V[VG]{I|L}Y 5.9684;5.8115;5.7009;5.544;5.3928;5.2359;4.7729;4.616;4.5055;4.3486 -;-;-;+;-;-;-;-;-;- + 339 + 1 2.09 48923.9 1.0 4652 3543 8189 DOHH2_400M_050219_1,8197 DOHH2_400M_050219_1,8197,NEEGFVRLY True True NEEGFVRLY 46.127874 563.780139148235 5718237.5 8189.0 nc|ENSG00000143476|Q9NZJ0-2|DTL;;ENSG00000143476|ENST00000366991|DTL 6.449407895406087 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8198 46.132 188.0 259950.0 25 0 12054.0 -1 0 64 938.434697009568 1874.854841085936 2 938.9363891482352 MULTI CID FTMS 0 0 0 8189 361887.21875 0.8134016961030173 -1 0.1197586059570312 9 1 EAQQNA{M(Oxidation (M))|F}YE[{I|L}P]D 12 -1 60.015 0.0 0.0 3.2011 0.0 0.0 451.1833363263688 0.0 451.1833363263688 0.0 28.99674684468792 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.805462187404089 EAQQNA{M(Oxidation (M))|F}YE[{I|L}P]D 3.2011 - 876 1 2.09 40631.8 1.0 4653 3543 8189 DOHH2_400M_050219_1,8198 DOHH2_400M_050219_1,8198, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8199 46.134 97.0 599350.0 25 0 36845.0 + 42213 VSGIYTFIY 9 95 531.780479657639 1061.546406382078 2 531.7811157107353 MULTI CID FTMS 0 0 0 8189 322483.3125 1.0 0 0.0 10 Unmodified _VSGIYTFIY_ REV__ENSG00000142347|ENST00000644032|MYO1F;REV__ENSG00000157483|ENST00000288235|MYO1E;REV__ENST00000594774.5_1_19:8618146-8642307:-|nuORF;REV__ENST00000594977.5_1_19:8612968-8642307:-|nuORF;REV__ENST00000595325.5_1_19:8616850-8642307:-|nuORF;REV__ENST00000599123.1_1_19:8619471-8620644:-|nuORF 23.1484247019978 0.2366544122328345 1 [VG]DPK[RD][Y{I|L}] 9 -1 + 28.974 0.0 0.0 2.7295 2.7295 72.315 0.0 0.0 0.0 4.052878778108212 1.954321750294671 1.954321750294671 4.247425010840047 0 0.0 1.6989700043360187 0.7302046884880937 0.0 [VG]DPK[RD][Y{I|L}];[VG]DPK{NN|[MP]|[D{I|L}]|[EV]}[YR];{[ES]|[DT]|[{I|L}C]}DGTV[R{I|L}]W;{[ES]|[DT]|[{I|L}C]}DGTV[WR]{I|L};[QP]G{I|L}T[RD][Y{I|L}];[QP]{I|L}GT[RD][Y{I|L}];[VG]D[W{M(Oxidation (M))|F}][K{I|L}][TP];[QP]GT{I|L}[RD][Y{I|L}];[VG]DT[MT][K{I|L}][TP];[QP]G{I|L}T{NN|[MP]|[D{I|L}]|[EV]}[YR] 2.7295;2.3293;2.2075;1.9703;1.7328;1.5669;1.5008;1.4492;1.4204;1.3327 -;-;-;-;-;-;-;-;-;- 392 1 2.09 50907.9 1.0 4654 3543 8189 DOHH2_400M_050219_1,8199 DOHH2_400M_050219_1,8199,VSGIYTFIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8200 46.137 185.0 375970.0 25 0 32356.0 + 31357 RNFPDAFEY 9 78 579.7643938182762 1157.5142347033525 2 579.7643920779228 MULTI CID FTMS 0 0 0 8189 294796.84375 1.0 0 0.0 11 Unmodified _RNFPDAFEY_ ENSG00000135678|ENST00000551568|CPM;ENST00000546912.1_1_12:69260670-69264157:-|nuORF 11.494710602746466 0.5255349189887087 1 A{M(Oxidation (M))|F}EY 4 5 36.938 0.0 0.0 3.1912 0.0 0.0 629.2928513535511 0.0 629.2928513535511 0.0 29.948500216800937 0.0 0.0 0 0.5 0.0 0.0 0.0 + A{M(Oxidation (M))|F}EY 3.1912 + + 78 1 2.09 58512.9 1.0 4655 3543 8189 DOHH2_400M_050219_1,8200 DOHH2_400M_050219_1,8200,RNFPDAFEY False True RNFPDAFEY 46.137201 579.764392077923 4654031.0 8189.0 ENST00000546912.1_1_12:69260670-69264157:-|nuORF;;ENSG00000135678|ENST00000551568|CPM 7.413429260253906 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8201 46.14 123.0 422890.0 25 0 28582.0 + 41021 VMEKSFLEY 9 96 573.2823095980098 1144.5500662628194 2 573.2814208865166 MULTI CID FTMS 0 0 0 8189 288217.15625 1.0 0 0.0 12 Unmodified _VMEKSFLEY_ ENSG00000159202|ENST00000360943|UBE2Z;ENST00000513342.5_1_17:46990150-47004493:+|nuORF;nc|ENSG00000159202|Q9H832-2|UBE2Z 13.90604991867851 0.4602628045680013 1 [YE]RRMEVY 8 7 + 20.635 0.0 0.0 1.8029 1.8029 69.354 0.0 0.0 0.0 2.6760624017703094 6.945378125959108 2.6760624017703094 3.010299956639809 0 0.3935078169319297 0.0 0.3054621874040891 0.0 [YE]RRMEVY;[YE]RRMVEY;[YE]{[ET]|[MV]}[QT]{I|L}VY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}C{[YD]|[{M(Oxidation (M))|F}M]}{I|L}VY;{[QN]|[E{I|L}]|[KN]}KC{[YD]|[{M(Oxidation (M))|F}M]}{I|L}VY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K][QT]{I|L}VY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}C[YV]EVY;{[QN]|[E{I|L}]|[KN]}KC[YV]EVY;[YE]{[ET]|[MV]}[WR]VY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[C(Carbamidomethyl (C))S][QT]{I|L}VY 1.8029;1.5399;1.2528;1.1145;0.96528;0.9536;0.85151;0.70227;0.68678;0.64209 -;-;-;-;-;-;-;-;-;- 217 1 2.09 44829.8 1.0 4656 3543 8189 DOHH2_400M_050219_1,8201 DOHH2_400M_050219_1,8201,VMEKSFLEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8202 46.147 435.0 304390.0 25 0 46485.0 23567 LTMFVIFL 8 161 492.2865999892055 982.558647045211 2 492.2857238650322 MULTI CID FTMS 0 0 0 8189 140708.078125 0.5745614091054793 -2 0.2337493896484375 13 Unmodified _LTMFVIFL_ ENSG00000102195|ENST00000218316|GPR50 9.347437153973935 0.7675937258251505 1 [{I|L}T]{[TV]|[{I|L}S]}K{I|L}N 7 5 30.008 0.0 0.0 3.054 0.0 0.0 0.0 210.0658851646048 210.0658851646048 18.898354337884264 0.0 0.0 0.0 0 0.0 2.0 0.1803115997617927 0.0 [{I|L}T]{[TV]|[{I|L}S]}K{I|L}N 3.054 - 214 1 2.09 105393.1 1.0 4657 3543 8189 DOHH2_400M_050219_1,8202 DOHH2_400M_050219_1,8202,LTMFVIFL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8203 46.152 248.0 381550.0 25 0 93700.0 + 30559 RENWISLRY 9 65 618.8275370627118 1235.6405211922236 2 618.8276855349541 MULTI CID FTMS 0 0 0 8189 129042.5390625 0.6210662228188856 -1 0.1197586059570312 14 Unmodified _RENWISLRY_ ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L 12.174745833636583 0.5071271664557081 1 YR 2 8 21.722 0.0 0.0 1.7579 0.0 0.0 0.0 913.4631441705686 913.4631441705686 1.838997249245452 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 YR 1.7579 - 65 + 1 2.09 75876.9 1.0 4658 3543 8189 DOHH2_400M_050219_1,8203 DOHH2_400M_050219_1,8203,RENWISLRY False True RENWISLRY 46.152103 618.827685534954 729344.75 8189.0 nc|ENSG00000121210|A2VDJ0|TMEM131L;;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;;ENSG00000121210|ENST00000409959|TMEM131L;;nc|ENSG00000121210|A2VDJ0-6|TMEM131L 5.417892297108968 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8204 46.166 800.0 121990.0 25 0 9457.0 -1 SEAPCCDKLY 10 144 621.760158451013 1241.505763968826 2 621.7601196169853 MULTI CID FTMS 0 0 0 8189 112089.609375 1.0 0 0.0 15 2 Carbamidomethyl (C) _SEAPC(Carbamidomethyl (C))C(Carbamidomethyl (C))DKLY_ nc|ENSG00000163743|Q96PM5-6|RCHY1 20.453626601364224 0.5043500229302764 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NDD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YY 9 -1 + 24.19 0.0 0.0 1.9485 1.9485 68.844 0.0 0.0 0.0 2.4477272448304923 2.4477272448304923 2.4477272448304923 2.4477272448304923 0 0.3054621874040891 0.0 0.6747425010840047 0.3807196863200844 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NDD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YY;{[ES]|[DT]|[{I|L}C]}S{[WN]|[YH]}DDN{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}N{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DDN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}D{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DDN{I|L}Y;{[ES]|[DT]|[{I|L}C]}Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDN{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[KC]DDN{I|L}Y;{[ES]|[DT]|[{I|L}C]}Q{[DA]|[EG]}ND{[MG]|[TS]}{I|L}Y;{[MG]|[TS]}D{[WN]|[YH]}[DP]D[RH] 1.9485;1.7513;1.3454;1.2958;1.0249;0.42401;0.30314;0.054695 -;-;-;-;-;-;-;- 803 + 1 2.09 74012.8 0.6000000238418579 4659 3543 8189 DOHH2_400M_050219_1,8204 DOHH2_400M_050219_1,8204,SEAPCCDKLY False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8205 46.176 588.0 138500.0 25 0 14036.0 + 25861 AIDRLVNIY 9 116 538.307436572979 1074.600320212758 2 538.8085204958916 MULTI CID FTMS 0 0 0 8189 110551.328125 0.2600432562234757 8 -0.8130683898925781 16 Unmodified _NLEPIITLY_ ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2 8.593279151180031 0.6146971463335029 1 PY 2 7 20.969 0.0 0.0 1.9513 0.0 0.0 796.4737160641236 0.0 796.4737160641236 0.0 7.835462822703498 0.0 0.0 0 0.0 0.0 0.0 0.0 PY 1.9513 - 136 + 1 2.09 63539.0 1.0 4660 3543 8189 DOHH2_400M_050219_1,8205 DOHH2_400M_050219_1,8205,NLEPIITLY False False AIDRLVNIY 46.17623 538.808520495892 513359.0625 8189.0 ENSG00000088930|ENST00000377191|XRN2;;nc|ENSG00000088930|Q9H0D6-2|XRN2 3.01564602057139 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8206 46.178 68.0 447640.0 25 0 30030.0 32766 SEDQAYRLL 9 72 547.777751200999 0 547.7778808474541 PEAK CID FTMS 0 0 0 8189 597591.6875 0.7152985314690546 1 -0.0695533752441406 17 Unmodified _SEDQAYRLL_ chrX:1629939-1633150|29|10.55|0.57|4.21|+|ENST00000381229|ASMT,ASMT;chrX:1629939-1636438|32|10.19|0.46|4.47|+|ENST00000381233|ASMT,ASMT;ENSG00000196433|ENST00000381241|ASMT;nc|ENSG00000292336|P46597-2|ASMT;nc|ENSG00000292336|P46597|ASMT 30.63653989081413 0.1077493867305487 1 KDD 3 8 18.02 0.0 0.0 1.6479 0.0 0.0 634.3327413162573 98.02533899478748 732.3580803110448 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.7302046884880937 0.0 KDD 1.6479 - 22 + 1 2.09 29155.6 1.0 4661 3543 8189 DOHH2_400M_050219_1,8206 DOHH2_400M_050219_1,8206,SEDQAYRLL True False SESRIFNEL 46.17785 547.777880847454 4861772.0 8189.0 ENSG00000123219|ENST00000396679|CENPK 3.744321783383688 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8208 46.183 6.8 8374300.0 25 0 796760.0 + 41001 VMAPRTVLL 9 83 500.3044714417434 998.5943899502868 2 500.3051025271416 MULTI CID FTMS 0 0 0 8207 6337215.5 0.671869351140676 1 -0.0539360046386718 1 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 36.506200033944 0.094635877243972 1 VMA 3 6 54.693 0.0 0.0 5.477 0.0 0.0 0.0 694.4273921962093 694.4273921962093 25.25092636279391 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + VMA 5.477 + + 101 + 1 2.09 53717.5 1.0 4662 3544 8207 DOHH2_400M_050219_1,8208 DOHH2_400M_050219_1,8208,VMAPRTVLL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8209 46.187 221.0 184620.0 25 0 22480.0 -1 FIKGQVALCK 10 76 582.33515182217 1162.65575071114 2 582.3356201052666 MULTI CID FTMS 0 0 0 8207 347629.78125 0.3598679221368329 4 -0.4030990600585937 2 Carbamidomethyl (C) _FIKGQVALC(Carbamidomethyl (C))K_ ENSG00000152127|ENST00000281923|MGAT5 3.944395688203298 0.708391353636983 1 Y 1 -1 12.218 0.0 0.0 1.0509 0.0 0.0 981.580965410162 0.0 981.580965410162 0.0 8.723637474483468 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0509 - 15 + 1 2.09 38501.9 1.0 4663 3544 8207 DOHH2_400M_050219_1,8209 DOHH2_400M_050219_1,8209,FIKGQVALCK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8210 46.188 55.0 1029800.0 25 0 127440.0 7662 EKKKTYIMKP 10 89 633.3691247518561 1264.7236965705122 2 633.3696777224541 MULTI CID FTMS 0 0 0 8207 785950.5625 0.748851254470255 -2 0.1893119812011718 3 Unmodified _EKKKTYIMKP_ ENST00000272793.9_1_2:170938445-170938493:+|nuORF 5.296884461304476 0.7021353017287152 1 Y 1 9 13.099 0.0 0.0 1.0357 0.0 0.0 1083.649369033206 0.0 1083.649369033206 0.0 1.979531151190626 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.0357 + + 70 + 1 2.09 49110.9 1.0 4664 3544 8207 DOHH2_400M_050219_1,8210 DOHH2_400M_050219_1,8210,EKKKTYIMKP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8211 46.19 95.0 715450.0 25 0 33993.0 + 11210 GENVIISHF 9 93 508.2641198192088 1014.5136867052177 2 508.2639343142509 MULTI CID FTMS 0 0 0 8207 456534.84375 0.9122312329679982 -1 0.0695533752441406 4 Unmodified _GENVIISHF_ ENSG00000177666|ENST00000336615|PNPLA2;ENST00000525250.5_1_11:821680-823850:+|nuORF 41.8396318013385 0.0653578398400075 1 {[DA]|[EG]}NV{I|L}{I|L}SH{M(Oxidation (M))|F} 9 0 {[DA]|[EG]}N + + 51.202 27.447 9.1459 5.0469 5.0469 56.774 0.0 0.0 0.0 0.0 21.464562208626965 0.0 0.0 0 0.8807196863200843 0.0 0.6643943297944485 0.0 + + {[DA]|[EG]}NV{I|L}{I|L}SH{M(Oxidation (M))|F} 5.0469 + + 188 + 1 2.09 54674.8 1.0 4665 3544 8207 DOHH2_400M_050219_1,8211 DOHH2_400M_050219_1,8211,GENVIISHF True True GENVIISHF 46.190309 508.263934314251 2738866.25 8207.0 ENST00000525250.5_1_11:821680-823850:+|nuORF;;ENSG00000177666|ENST00000336615|PNPLA2 6.746162573496501 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8212 46.194 191.0 346920.0 25 0 43926.0 + 8325 AEDPNLNQPVW 11 96 641.8824425367899 1281.7503321403797 2 641.8828613162041 MULTI CID FTMS 0 0 0 8207 207732.375 0.4281384509064256 -2 0.1893119812011718 5 Unmodified _ERLLLTRPVW_ ENSG00000135837|ENST00000367607|CEP350 4.3292370932331545 0.7066112369704343 1 [VP]QWENQ 7 10 30.679 0.0 0.0 2.3935 0.0 0.0 0.0 397.3409480386204 397.3409480386204 15.194182131708306 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.8494850021680094 [VP]QWENQ 2.3935 - 356 1 2.09 55824.6 1.0 4666 3544 8207 DOHH2_400M_050219_1,8212 DOHH2_400M_050219_1,8212,ERLLLTRPVW False False AEDPNLNQPVW 46.193998 641.882861316204 1603059.875 8207.0 ENSG00000135837|ENST00000367607|CEP350 7.259891510009766 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8213 46.199 249.0 146830.0 25 0 12853.0 + 29892 QRYAFATL 8 79 485.2616912278871 968.5088295225742 2 485.2604553103447 MULTI CID FTMS 0 0 0 8207 95053.0078125 0.1276205952547082 2 -0.1478996276855468 6 Unmodified _QRYAFATL_ REV__ENSG00000221829|ENST00000378643|FANCG 9.347437153973935 0.7675937258251505 1 {[QG]|[NA]}Y{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L} 8 -1 + 16.068 0.0 0.0 1.659 1.659 79.081 0.0 0.0 0.0 -0.2574037360865553 0.5833627920120001 -0.2574037360865553 14.97547537623447 0 0.0 0.0 0.3494850021680094 0.0 {[QG]|[NA]}Y{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L};{[QG]|[NA]}W{I|L}[RN][VP] 1.659;0.1128 -;- 98 + 1 2.09 34105.7 1.0 4667 3544 8207 DOHH2_400M_050219_1,8213 DOHH2_400M_050219_1,8213,QRYAFATL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8214 46.212 800.0 190810.0 25 0 18323.0 + 19336 LEMTPELGHVY 11 130 644.8157913175064 1287.6170297018127 2 644.8170043826103 MULTI CID FTMS 0 0 0 8207 91376.5234375 0.9643939582583348 1 -0.0539360046386718 7 Unmodified _LEMTPELGHVY_ ENSG00000241106|ENST00000438763|HLA-DOB;ENST00000475235.1_1_6:32782088-32784728:-|nuORF 66.45667989310934 0.0429411148994294 1 {I|L}EMTPE{I|L}GHVY 11 0 + 76.258 0.0 0.0 5.9224 5.9224 83.841 0.0 0.0 0.0 56.28022563245243 4.064327949285627 4.064327949285627 5.899127429673825 0 0.9247425010840048 1.6989700043360187 0.805462187404089 0.0 + + {I|L}EMTPE{I|L}GHVY;{I|L}EMTP[W{I|L}]HVY;{I|L}EMTPE{I|L}G{[NV]|[RG]}W;{I|L}EMTP[W{I|L}]{[NV]|[RG]}W;{I|L}EMTP[NP][QP]VY;{[QN]|[E{I|L}]|[KN]}MT{I|L}EPTM[HS];{I|L}EMTPW[C(Carbamidomethyl (C))R][VP];{I|L}EMTPE{I|L}G[KP]{[CA]|SS};{I|L}EMTP[W{I|L}][KP]{[CA]|SS};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))K][VS]PTM[HS] 5.9224;5.4643;5.2811;4.8229;4.6555;4.4138;4.0463;4.0293;3.864;3.7327 +;-;-;-;-;-;-;-;-;- + 830 + 1 2.09 114647.5 0.550000011920929 4668 3544 8207 DOHH2_400M_050219_1,8214 DOHH2_400M_050219_1,8214,LEMTPELGHVY True True LEMTPELGHVY 46.212459 644.81700438261 612616.4375 8207.0 ENSG00000241106|ENST00000438763|HLA-DOB;;ENST00000475235.1_1_6:32782088-32784728:-|nuORF 9.019776344299316 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8215 46.215 113.0 634140.0 25 0 30831.0 15914 ISVGIFGVLCL 11 129 560.8265095566495 1119.638466180099 2 560.8248779177666 MULTI CID FTMS 0 0 0 8207 541438.0625 0.627410654367702 -2 0.1893119812011718 8 Unmodified _ISVGIFGVLCL_ ENSG00000155850|ENST00000286298|SLC26A2 24.020572477871973 0.5281922720044371 1 WP{I|L}{I|L}K[HV]D{I|L} 9 8 + 54.923 0.0 0.0 4.9054 4.9054 82.416 0.0 0.0 0.0 21.938200260161125 8.871404989829607 8.871404989829607 8.871404989829607 0 1.3882104921644451 1.3979400086720375 0.5 0.0 WP{I|L}{I|L}K[HV]D{I|L};WP{I|L}{I|L}K[HV]EV;WP{I|L}{I|L}[HT][Q{I|L}]{I|L};{[{M(Oxidation (M))|F}D]|MM}K{I|L}NKKD{I|L};WP{I|L}{I|L}[{I|L}T][HQ]{I|L};WP{I|L}{I|L}[{I|L}T]{I|L}[HQ];[{M(Oxidation (M))|F}V]GS{I|L}NKKD{I|L};{[{M(Oxidation (M))|F}D]|MM}K{I|L}NKKEV;{[{M(Oxidation (M))|F}D]|MM}K{I|L}GGKKD{I|L};WP{I|L}{I|L}[{I|L}T]{I|L}G[HA] 4.9054;4.1131;3.167;2.946;2.8765;2.3776;2.2751;2.1537;2.1236;2.1088 -;-;-;-;-;-;-;-;-;- 436 + 1 2.09 60435.3 1.0 4669 3544 8207 DOHH2_400M_050219_1,8215 DOHH2_400M_050219_1,8215,ISVGIFGVLCL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8216 46.219 204.0 225520.0 25 0 10322.0 -1 0 78 615.8053163512017 2459.1921595384065 4 615.8060790896416 MULTI CID FTMS 0 0 0 8207 222666.5 1.0 0 0.0 9 1 WMV[WP][WQ] 7 -1 31.298 0.0 0.0 1.2727 0.0 0.0 1427.661161437912 0.0 1427.661161437912 0.0 9.009230724083714 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 WMV[WP][WQ] 1.2727 - 106 1 2.09 39421.9 1.0 4670 3544 8207 DOHH2_400M_050219_1,8216 DOHH2_400M_050219_1,8216, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8217 46.227 494.0 247490.0 25 0 19210.0 -1 0 111 820.7377820224573 2459.191516667572 3 821.0731078982353 MULTI CID FTMS 0 0 0 8207 167058.546875 1.0 0 0.0 10 1 [{I|L}T]G{I|L}H{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}{I|L}KGEDWMVQ{I|L}EN{I|L} 21 -1 + 152.54 0.0 0.0 6.2027 6.2027 61.015 0.0 0.0 0.0 3.807196863200829 3.807196863200829 3.807196863200829 0.0 0 2.536758077242795 0.0 0.7302046884880937 0.3807196863200844 [{I|L}T]G{I|L}H{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}{I|L}KGEDWMVQ{I|L}EN{I|L};[{I|L}T]G{I|L}H{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}{I|L}KGEDWMVK{I|L}EN{I|L};MA[DG]{I|L}KVMWDEGK{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}H{I|L}G[VP];MA[TA]{I|L}QVMWDEGK{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}H{I|L}G[VP];MA[TA]{I|L}KVMWDEGK{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}H{I|L}G[VP];[{I|L}T]G{I|L}H{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}{I|L}KWDWMVQ{I|L}EN{I|L};[{I|L}T]G{I|L}H{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}{I|L}KWDWMVK{I|L}EN{I|L};MA[DG]{I|L}KVMWDEGK{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}{I|L}Y{[QV]|[N{I|L}]|[RA]|[KV]};MA[TA]{I|L}KVMWDEGK{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}{I|L}Y{[QV]|[N{I|L}]|[RA]|[KV]};MA[DG]{I|L}QVMWDEGK{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}{I|L}Y{[QV]|[N{I|L}]|[RA]|[KV]} 6.2027;6.2027;6.0258;6.0258;6.0258;5.9271;5.9271;5.9012;5.9012;5.9012 -;-;-;-;-;-;-;-;-;- 5602 1 2.09 88836.0 1.0 4671 3544 8207 DOHH2_400M_050219_1,8217 DOHH2_400M_050219_1,8217, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8218 46.232 227.0 321060.0 25 0 17457.0 + 25550 NETLIVSKF 9 109 525.795960903181 1049.577368873162 2 525.7957031130791 MULTI CID FTMS 0 0 0 8207 143125.390625 0.5470293788014631 -1 0.0695533752441406 11 Unmodified _NETLIVSKF_ ENSG00000116455|ENST00000235090|WDR77 61.08992128646608 0.0254786290039527 1 {[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}{I|L}VSK{M(Oxidation (M))|F} 9 0 + 57.955 0.0 0.0 5.5217 5.5217 82.392 0.0 0.0 0.0 5.642492736872597 5.942346538160059 5.642492736872597 5.942346538160059 0 1.4802046884880935 0.0 0.0 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}{I|L}VSK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}{I|L}VKAY;{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}{I|L}VKS{M(Oxidation (M))|F};[{I|L}T][HK]{I|L}{I|L}YY;{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}{I|L}[HK][VP];[{I|L}T]{I|L}[HK]{I|L}YY;{I|L}{I|L}T[HK]{I|L}YY;{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}[HK]{I|L}[VP];{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}[HK][VP]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}[RH][PA]{I|L} 5.5217;4.9556;4.8164;3.1046;2.7539;2.3171;2.0662;1.9664;1.2902;0.88437 +;-;-;-;-;-;-;-;-;- + 235 + 1 2.09 61220.6 1.0 4672 3544 8207 DOHH2_400M_050219_1,8218 DOHH2_400M_050219_1,8218,NETLIVSKF True True NETLIVSKF 46.231777 525.795703113079 1253095.625 8207.0 ENSG00000116455|ENST00000235090|WDR77 6.4799580574035645 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8220 46.248 800.0 52676.0 25 0 7734.7 -1 0 69 1006.1425525578788 3015.405828273836 3 1006.477587878704 MULTI CID FTMS 0 0 0 8219 75500.9140625 0.9245311772935444 1 -0.093963623046875 1 1 {M(Oxidation (M))|F} 1 -1 2.4743 0.0 0.0 0.082054 0.0 0.0 2009.897707487608 855.3980806940061 2865.2957881816137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.082054 - 9 + 1 2.09 38151.4 0.5199999809265137 4673 3545 8219 DOHH2_400M_050219_1,8220 DOHH2_400M_050219_1,8220, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8221 46.25 106.0 592460.0 25 0 62277.0 + 43357 WPLIKHVEV 9 92 374.2215987433117 1119.642966830135 3 374.2215453982353 MULTI CID FTMS 0 0 0 8219 403436.46875 0.7912638243980664 -1 0.0539360046386718 2 Unmodified _WPLIKHVEV_ ENSG00000189233|ENST00000413272|NUGGC 20.41453444215458 0.284085796332423 1 WP{I|L}{I|L}K[HV]EV 9 0 + 31.702 0.0 0.0 2.8314 2.8314 70.985 0.0 0.0 0.0 12.66058547433449 5.78405388954199 5.78405388954199 3.0102999566398125 0 0.0 0.0 0.4247425010840047 0.0 + + WP{I|L}{I|L}K[HV]EV;WP{I|L}{I|L}[HV]KEV;WP{I|L}{I|L}K[HV]D{I|L};WP{I|L}{I|L}[HV]KD{I|L};WP{I|L}{I|L}[HV]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};WP{I|L}{I|L}[HV]V{[SA]|[TG]}V;WP{I|L}{I|L}[HV]V[SG]{I|L};[R{M(Oxidation (M))|F}]E[WK]KKV;[HV][{M(Oxidation (M))|F}V]K{I|L}{I|L}[HQ] 2.8314;2.5625;2.223;1.9541;1.59;1.5491;0.94064;0.88894;0.50478 +;-;-;-;-;-;-;-;- + 124 + 1 2.09 60262.9 1.0 4674 3545 8219 DOHH2_400M_050219_1,8221 DOHH2_400M_050219_1,8221,WPLIKHVEV False True WPLIKHVEV 46.25045 374.221545398235 9527127.0 8219.0 ENSG00000189233|ENST00000413272|NUGGC 5.230788548787435 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8222 46.252 93.0 639910.0 25 0 69515.0 + 25843 NLDPLTETY 9 102 533.2590120813437 0 533.2599975466728 PEAK CID FTMS 0 0 0 8219 352345.71875 0.1862809405543914 -2 0.1234893798828125 3 Unmodified _NLDPLTETY_ ENSG00000173418|ENST00000334982|NAA20;nc|ENSG00000173418|P61599-2|NAA20 43.77239144664712 0.0487019148086553 1 T{I|L}NDET 6 6 27.726 0.0 0.0 2.6046 0.0 0.0 181.08020570389985 207.1139315240844 388.1941372279842 0.0 0.0 0.0 0.0 0 0.5 0.0 1.1307196863200843 0.0 T{I|L}NDET 2.6046 - 303 + 1 2.09 50493.6 1.0 4675 3545 8219 DOHH2_400M_050219_1,8222 DOHH2_400M_050219_1,8222,NLDPLTETY True True NLDPLTETY 46.252498 533.259997546673 13181799.0 8219.0 nc|ENSG00000173418|P61599-2|NAA20;;ENSG00000173418|ENST00000334982|NAA20 3.910738865534464 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8223 46.257 234.0 494500.0 25 0 122900.0 + 37840 TLTSKLYSL 9 117 513.2975803102713 1024.5806076873423 2 513.2980834841728 MULTI CID FTMS 0 0 0 8219 216497.546875 0.0573461774002246 -2 0.1234893798828125 4 Unmodified _TLTSKLYSL_ ENSG00000184076|ENST00000330029|UQCR10;nc|ENSG00000184076|Q9UDW1-2|UQCR10 70.33199760932243 0.0209706178985989 1 [{I|L}T]TSK{I|L}YS{I|L} 9 0 + 70.134 0.0 0.0 6.8451 6.8451 92.761 0.0 0.0 0.0 4.295606106491903 14.09256854528806 4.295606106491903 13.288493772929044 0 1.4049471895720984 2.0 1.055462187404089 0.0 + + [{I|L}T]TSK{I|L}YS{I|L};[{I|L}T][KS]YS{I|L}T{I|L};[{I|L}T]TSK{I|L}VTY;[KS]T{I|L}YS{I|L}T{I|L};[Y{I|L}]KSTS{I|L}T{I|L};[Y{I|L}]SKTS{I|L}T{I|L};{[TV]|[{I|L}S]}KTYS{I|L}T{I|L};[{I|L}T]T[VP][TP]PS{I|L};{[TV]|[{I|L}S]}KYTS{I|L}T{I|L};{[TV]|[{I|L}S]}YKTS{I|L}T{I|L} 6.8451;5.5481;5.3182;4.5734;4.5236;4.5236;4.3789;4.2397;3.9643;3.9153 +;-;-;-;-;-;-;-;-;- + 1570 + 1 2.09 91875.9 1.0 4676 3545 8219 DOHH2_400M_050219_1,8223 DOHH2_400M_050219_1,8223,TLTSKLYSL True True TLTSKLYSL 46.256902 513.298083484173 23976520.0 8219.0 ENSG00000184076|ENST00000330029|UQCR10;;nc|ENSG00000184076|Q9UDW1-2|UQCR10 4.21497639020284 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8224 46.263 325.0 534930.0 25 0 63226.0 + 31636 RRFTEIYEF 9 84 420.8840312715759 1259.6302644149278 3 420.8838989138603 MULTI CID FTMS 0 0 0 8219 168102.21875 0.0525334824262429 -2 0.1234893798828125 5 Unmodified _RRFTEIYEF_ chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1;nc|ENSG00000165178|A8MVU1|NCF1C;nc|ENSG00000290838|A6NI72|NCF1B 22.736283301280096 0.2418982879461534 1 {I|L}YE{M(Oxidation (M))|F} 4 5 36.186 0.0 0.0 2.8727 0.0 0.0 689.3612815481644 0.0 689.3612815481644 0.0 19.98773768811723 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}YE{M(Oxidation (M))|F} 2.8727 + + 135 1 2.09 141052.6 1.0 4677 3545 8219 DOHH2_400M_050219_1,8224 DOHH2_400M_050219_1,8224,RRFTEIYEF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8225 46.271 459.0 372590.0 25 0 69056.0 14459 IFVNMDNLIY 10 133 621.3141307043247 1240.6137084754494 2 621.3143798708916 MULTI CID FTMS 0 0 0 8219 166249.96875 0.2838298578396275 -1 0.0539360046386718 6 Unmodified _IFVNMDNLIY_ ENSG00000172318|ENST00000392690|B3GALT1 27.628801355627647 0.3479284626772844 1 DT{I|L}{M(Oxidation (M))|F}{I|L}YY 7 7 60.438 0.0 0.0 4.8716 0.0 0.0 307.1649342267594 0.0 307.1649342267594 0.0 35.24350030035414 0.0 0.0 0 0.9247425010840048 0.0 1.6989700043360187 0.0 DT{I|L}{M(Oxidation (M))|F}{I|L}YY 4.8716 - 3439 1 2.09 128111.2 1.0 4678 3545 8219 DOHH2_400M_050219_1,8225 DOHH2_400M_050219_1,8225,IFVNMDNLIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8226 46.279 436.0 330600.0 25 0 33969.0 + 9410 FKDNLVKIQ 9 135 552.8229714012238 1103.6313898692474 2 552.8228637576103 MULTI CID FTMS 0 0 0 8219 149847.546875 0.8576690077128336 -1 0.0539360046386718 7 Unmodified _FKDNLVKIQ_ REV__CON__Q7RTS7;REV__ENSG00000170484|ENST00000305620|KRT74 7.289230182591677 0.6602208344931196 1 {[QV]|[N{I|L}]|[RA]|[KV]}V 3 -1 10.947 0.0 0.0 0.99189 0.0 0.0 0.0 774.4141676308337 774.4141676308337 2.1743204599390147 0.0 0.0 0.0 0 0.4247425010840047 0.8538719643217619 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V 0.99189 + + 72 1 2.09 111906.9 1.0 4679 3545 8219 DOHH2_400M_050219_1,8226 DOHH2_400M_050219_1,8226,FKDNLVKIQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8227 46.293 800.0 235940.0 25 0 14574.0 + 7749 ELEKSVYWDY 10 158 666.3111061283753 1330.6076593235505 2 666.3115722537041 MULTI CID FTMS 0 0 0 8219 110740.09375 0.4756142989373083 -1 0.0539360046386718 8 Unmodified _ELEKSVYWDY_ ENSG00000141258|ENST00000268989|SGSM2;nc|ENSG00000141258|O43147-5|SGSM2;nc|ENSG00000141258|O43147|SGSM2 114.18643581695662 0.001143558078943 1 {[QN]|[E{I|L}]|[KN]}EKSVYWDY 10 0 + 79.415 0.0 0.0 5.9684 5.9684 87.271 0.0 0.0 0.0 27.040331674680047 16.53212513775344 16.53212513775344 9.164539485499262 0 1.6549471895720984 1.6989700043360187 2.309894379144197 0.3494850021680094 + + {[QN]|[E{I|L}]|[KN]}EKSVYWDY;{[QN]|[E{I|L}]|[KN]}EKSVY{[DA]|[EG]}DY;{[QN]|[E{I|L}]|[KN]}EK[WY]WDY;{[QN]|[E{I|L}]|[KN]}EKS{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}GDY;{[QN]|[E{I|L}]|[KN]}EKSVY[DG]EY;{[QN]|[E{I|L}]|[KN]}EK[MT]V{M(Oxidation (M))|F}GDY;[{I|L}T]{[RE]|[WV]}SVYWDY;{[QN]|[E{I|L}]|[KN]}EKS{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DG]{M(Oxidation (M))|F}Y;{[YD]|[{M(Oxidation (M))|F}M]}W[WK]E{I|L}EY;{[QN]|[E{I|L}]|[KN]}EK[MT]V[DG]{M(Oxidation (M))|F}Y 5.9684;5.2796;4.8965;4.8109;4.6282;4.5793;3.9362;3.9237;3.8825;3.692 +;-;-;-;-;-;-;-;-;- + 6917 1 2.09 141634.2 0.6000000238418579 4680 3545 8219 DOHH2_400M_050219_1,8227 DOHH2_400M_050219_1,8227,ELEKSVYWDY True True ELEKSVYWDY 46.292539 666.311572253704 1302148.0 8219.0 ENSG00000141258|ENST00000268989|SGSM2;;nc|ENSG00000141258|O43147|SGSM2;;nc|ENSG00000141258|O43147-5|SGSM2 7.056986172993978 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8228 46.306 800.0 237510.0 25 0 15861.0 -1 0 147 764.696858076699 0 764.6976196169853 PEAK CID FTMS 0 0 0 8219 94659.1015625 0.3563442242682282 -1 0.0539360046386718 9 1 A{I|L}QS{I|L}K 6 -1 27.076 0.0 0.0 1.7727 0.0 0.0 638.9123185930479 245.0416964166625 883.9540150097104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.6861818737241735 A{I|L}QS{I|L}K 1.7727 - 746 + 1 2.09 139715.8 0.5699999928474426 4681 3545 8219 DOHH2_400M_050219_1,8228 DOHH2_400M_050219_1,8228, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8229 46.314 339.0 265350.0 25 0 25212.0 + 7300 EEVIKWTKF 9 123 393.88586996397873 1178.6357804921363 3 393.8849975466728 MULTI CID FTMS 0 0 0 8219 88648.3984375 0.56291270319957 -1 0.0539360046386718 10 Unmodified _EEVIKWTKF_ ENSG00000130935|ENST00000253247|NOL11 20.580933911654288 0.2795815587326093 1 EEV{I|L}K{[WT]|[RM]}K{M(Oxidation (M))|F} 9 0 + 53.623 0.0 0.0 4.5496 4.5496 85.933 0.0 0.0 0.0 42.20328853667611 13.46787486224656 13.46787486224656 17.65916793966631 0 0.0 1.0457574905606752 0.3054621874040891 0.4247425010840047 + + EEV{I|L}K{[WT]|[RM]}K{M(Oxidation (M))|F};EEV{I|L}K[Q{I|L}]{[SA]|[TG]}Y;EEV{I|L}[RH][H{I|L}]{M(Oxidation (M))|F};{[WT]|[RM]}[RH]K{I|L}V[HC];EEV{I|L}[RH]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[WT]|[RM]}K[RH]{I|L}V[HC];[KT]W[RH]{I|L}V[HC];EEV[RH]{I|L}[H{I|L}]{M(Oxidation (M))|F};EEV[RH]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[WT]|[RM]}K{I|L}[RH]V[HC] 4.5496;3.0513;2.4442;2.3269;1.6556;1.5569;1.4747;1.3668;0.57822;0.47952 +;-;-;-;-;-;-;-;-;- + 214 + 1 2.09 76411.5 1.0 4682 3545 8219 DOHH2_400M_050219_1,8229 DOHH2_400M_050219_1,8229,EEVIKWTKF False True EEVIKWTKF 46.313962 393.884997546673 920055.4375 8219.0 ENSG00000130935|ENST00000253247|NOL11 5.448291619618733 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8230 46.32 328.0 239420.0 25 0 17211.0 + -1 LMLLPITL 8 128 486.2951924914876 970.5758320497752 2 486.2961913943291 MULTI CID FTMS 0 0 0 8219 99465.8359375 0.7586178521619514 2 -0.24884033203125 11 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))LM(Oxidation (M))LLPITL_ REV__ENST00000433446.1_1_7:86781523-86781595:-|nuORF 15.768221252438446 0.6779680726941459 1 VVEVE 5 -1 20.225 0.0 0.0 2.0838 0.0 0.0 0.0 412.23594080142817 412.23594080142817 2.675566008486747 0.0 0.0 0.0 0 0.0 0.0 0.8252574989159953 0.0 VVEVE 2.0838 - 149 + 1 2.09 63771.8 1.0 4683 3545 8219 DOHH2_400M_050219_1,8230 DOHH2_400M_050219_1,8230,LMLLPITL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8231 46.326 323.0 292830.0 25 0 31662.0 + 8563 ETLKSEVVIE 10 130 573.8156842604453 1145.6168155876906 2 574.3179809451103 MULTI CID FTMS 0 0 0 8219 210668.703125 1.0 0 0.0 12 Unmodified _ETLKSEVVIE_ REV__ENSG00000182253|ENST00000336292|SYNM;REV__nc|ENSG00000182253|O15061-2|SYNM 6.2057823575117 0.6979311171683138 1 Y 1 -1 13.495 0.0 0.0 1.178 0.0 0.0 964.54239649765 0.0 964.54239649765 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.178 - 121 + 1 2.09 74069.9 1.0 4684 3545 8219 DOHH2_400M_050219_1,8231 DOHH2_400M_050219_1,8231,ETLKSEVVIE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8233 46.332 99.0 606370.0 25 0 114170.0 + + 16922 KEPEQPPALW 10 76 597.856461703229 1193.698370473258 2 597.8566161990166 MULTI CID FTMS 0 0 0 8232 593803.6875 0.5750702354518115 4 -0.4637870788574219 1 Unmodified _KILCYKKLW_ ENSG00000153395|ENST00000283415|LPCAT1 4.75600775471527 0.7486543447549536 1 W 1 -1 13.979 0.0 0.0 1.1711 0.0 0.0 989.6078075843892 0.0 989.6078075843892 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1711 + + 29 + 1 2.088 49477.6 1.0 4685 3546 8232 DOHH2_400M_050219_1,8233 DOHH2_400M_050219_1,8233,KILCYKKLW False False KEPEQPPALW 46.33176 597.856616199017 869207.25 8232.0 ENSG00000153395|ENST00000283415|LPCAT1 1.6807632446289062 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8234 46.335 162.0 380540.0 25 0 26004.0 6871 EEEGQRSRFY 10 89 650.7968863705026 1299.5792198078052 2 650.7974120974541 MULTI CID FTMS 0 0 0 8232 256955.84375 0.3559800332922772 2 -0.2551994323730469 2 Unmodified _EEEGQRSRFY_ nc|ENSG00000088833|Q9UNZ2-5|NSFL1C 13.042465956692816 0.6287021003332052 1 EEMPAT 6 8 50.507 0.0 0.0 3.8864 0.0 0.0 0.0 638.2947481744749 638.2947481744749 28.588029605097248 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.4247425010840047 0.0 EEMPAT 3.8864 - 338 + 1 2.088 53178.4 1.0 4686 3546 8232 DOHH2_400M_050219_1,8234 DOHH2_400M_050219_1,8234,EEEGQRSRFY False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8235 46.336 11.0 8144500.0 25 0 1893400.0 + 31639 RRFTEIYEF 9 59 630.822318711543 1259.6300844898858 2 630.8229247927666 MULTI CID FTMS 0 0 0 8232 4590492.5 0.5667766947413272 -1 0.093963623046875 3 Unmodified _RRFTEIYEF_ chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1;nc|ENSG00000165178|A8MVU1|NCF1C;nc|ENSG00000290838|A6NI72|NCF1B 34.40172386719151 0.1061884637610825 1 E[{I|L}P][KS]{I|L}YE{M(Oxidation (M))|F} 9 5 34.9 0.0 0.0 2.7706 0.0 0.0 135.06875807929845 0.0 135.06875807929845 0.0 21.087353034733034 0.0 0.0 0 0.3807196863200844 0.0 0.0 1.6989700043360187 E[{I|L}P][KS]{I|L}YE{M(Oxidation (M))|F} 2.7706 - 73 1 2.088 72787.6 1.0 4687 3546 8232 DOHH2_400M_050219_1,8235 DOHH2_400M_050219_1,8235,RRFTEIYEF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8236 46.337 16.0 4623700.0 25 0 484800.0 + 32809 SEFIDSQRVW 10 64 633.8093088594007 1265.6040647856014 2 633.8096191287041 MULTI CID FTMS 0 0 0 8232 2675704.25 1.0 0 0.0 4 Unmodified _SEFIDSQRVW_ ENSG00000174231|ENST00000304992|PRPF8;ENST00000572445.1_1_17:1564459-1565038:-|nuORF 51.41523569358685 0.0718446036348414 1 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}DSQRVW 10 0 + 73.404 0.0 0.0 5.7999 5.7999 86.221 0.0 0.0 0.0 58.73835032203424 9.51544993495972 9.51544993495972 9.164539485499247 0 1.5 0.0 0.4247425010840047 0.0 + + {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}DSQRVW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}DS[AG]RVW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}DSQ[VG]VW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}G[NG]SQRVW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}DS[AG][VG]VW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}G[NG]S[AG]RVW;[MT]M{I|L}DS[{I|L}V]D{[QN]|[E{I|L}]|[KN]};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[WE]QRVW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}DS[{I|L}V]D{[QN]|[E{I|L}]|[KN]};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}D[W{I|L}]D{[QN]|[E{I|L}]|[KN]} 5.7999;5.0758;5.0758;4.7402;4.3545;4.0189;3.9087;3.7045;3.5136;2.994 +;-;-;-;-;-;-;-;-;- + 380 + 1 2.088 61454.2 1.0 4688 3546 8232 DOHH2_400M_050219_1,8236 DOHH2_400M_050219_1,8236,SEFIDSQRVW True True SEFIDSQRVW 46.337322 633.809619128704 38860008.0 8232.0 ENST00000572445.1_1_17:1564459-1565038:-|nuORF;;ENSG00000174231|ENST00000304992|PRPF8 8.688718954722086 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8237 46.339 62.0 1346900.0 25 0 201040.0 + 29054 QEIPVNVRF 9 81 551.3062483740559 1100.5979438149118 2 551.3063232302666 MULTI CID FTMS 0 0 0 8232 886596.375 0.725147385622786 -1 0.093963623046875 5 Unmodified _QEIPVNVRF_ ENSG00000133313|ENST00000324262|CNDP2 58.6788170122104 0.0268135626297836 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PVN 6 3 39.654 0.0 0.0 3.6029 0.0 0.0 0.0 417.22666345767817 417.22666345767817 19.731975075880325 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.4247425010840047 + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PVN 3.6029 + + 48 + 1 2.088 67765.1 1.0 4689 3546 8232 DOHH2_400M_050219_1,8237 DOHH2_400M_050219_1,8237,QEIPVNVRF True True QEIPVNVRF 46.338854 551.306323230267 8454628.0 8232.0 ENSG00000133313|ENST00000324262|CNDP2 4.457761883735657 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8238 46.34 50.0 1174100.0 25 0 58259.0 7363 EGAQCPAPLSY 11 89 568.2566811573435 1134.4988093814868 2 568.2572509646416 MULTI CID FTMS 0 0 0 8232 572719.625 1.0 0 0.0 6 Unmodified _EGAQCPAPLSY_ ENSG00000241119|ENST00000354728|UGT1A9;ENSG00000242366|ENST00000373450|UGT1A8;ENSG00000242515|ENST00000344644|UGT1A10;ENSG00000244122|ENST00000373426|UGT1A7;nc|ENSG00000241119|O60656-2|UGT1A9;nc|ENSG00000242366|Q9HAW9-2|UGT1A8;nc|ENSG00000242515|Q9HAW8-2|UGT1A10;nc|ENSG00000244122|Q9HAW7-2|UGT1A7 16.149105407346934 0.6992268271266642 1 {[QV]|[N{I|L}]|[RA]|[KV]}[HM]N{I|L}{[QC]|[C(Carbamidomethyl (C))A]}Y 9 9 + 43.35 0.0 0.0 3.8211 3.8211 85.282 0.0 0.0 0.0 10.954387282529789 7.36371556024956 7.36371556024956 43.35016244829767 0 0.9247425010840048 1.3979400086720375 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[HM]N{I|L}{[QC]|[C(Carbamidomethyl (C))A]}Y 3.8211 - 232 1 2.088 49361.9 1.0 4690 3546 8232 DOHH2_400M_050219_1,8238 DOHH2_400M_050219_1,8238,EGAQCPAPLSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8239 46.343 137.0 740030.0 25 0 134300.0 + 35252 SSEQTFMYY 9 115 578.2366893979419 1154.4588258626836 2 578.2368041872978 MULTI CID FTMS 0 0 0 8232 480604.71875 0.1081472414398338 -1 0.093963623046875 7 Unmodified _SSEQTFMYY_ ENSG00000115758|ENST00000234111|ODC1 30.7034409873982 0.1405282614900322 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HT{M(Oxidation (M))|F}MYY 8 4 + 52.573 0.0 0.0 4.5539 4.5539 77.215 0.0 0.0 0.0 9.4622725880631 28.62018561222179 9.4622725880631 3.979400086720375 0 0.8182503180159344 2.0 1.424742501084005 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HT{M(Oxidation (M))|F}MYY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TH{M(Oxidation (M))|F}MYY;[QT]DST{M(Oxidation (M))|F}MYY;[AG]ESST{M(Oxidation (M))|F}MYY;[AG]TDST{M(Oxidation (M))|F}MYY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SST{M(Oxidation (M))|F}MYY;[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}H{M(Oxidation (M))|F}MYY;{[CA]|SS}EQT{M(Oxidation (M))|F}MYY;{[ES]|[DT]|[{I|L}C]}QST{M(Oxidation (M))|F}MYY;{[ES]|[DT]|[{I|L}C]}SQT{M(Oxidation (M))|F}MYY 4.5539;4.2092;3.1413;3.1055;3.0872;3.0399;2.7955;2.5986;2.5739;2.4225 -;-;-;-;-;-;-;+;-;- + 773 1 2.088 77810.5 1.0 4691 3546 8232 DOHH2_400M_050219_1,8239 DOHH2_400M_050219_1,8239,SSEQTFMYY False True SSEQTFMYY 46.342989 578.236804187298 53660492.0 8232.0 ENSG00000115758|ENST00000234111|ODC1 6.441234111785889 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8240 46.346 152.0 491230.0 25 0 64757.0 + 36486 TADHNLLLY 9 89 530.2768111576962 1058.5390693821923 2 530.2778808474541 MULTI CID FTMS 0 0 0 8232 288919.5 0.748271366032385 -1 0.093963623046875 8 Unmodified _TADHNLLLY_ ENSG00000183751|ENST00000568546|TBL3 34.40172386719151 0.1061884637610825 1 {I|L}{I|L}{I|L}N{[QD]|[EN]|[WG]|[KD]|[RS]}Y 7 7 49.781 0.0 0.0 4.7028 0.0 0.0 181.0678302237924 0.0 181.0678302237924 0.0 37.791229100142445 0.0 0.0 0 0.4247425010840047 0.0 0.7302046884880937 0.3494850021680094 {I|L}{I|L}{I|L}N{[QD]|[EN]|[WG]|[KD]|[RS]}Y 4.7028 - 156 + 1 2.088 64594.3 1.0 4692 3546 8232 DOHH2_400M_050219_1,8240 DOHH2_400M_050219_1,8240,TADHNLLLY True True TADHNLLLY 46.346016 530.277880847454 2676848.0 8232.0 ENSG00000183751|ENST00000568546|TBL3 4.722755988438924 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8241 46.353 378.0 259560.0 25 0 63244.0 + 332 AEAGRLEM 8 108 438.71609271585527 875.4176324985106 2 438.7162048220634 MULTI CID FTMS 0 0 0 8232 184594.828125 1.0 0 0.0 9 Unmodified _AEAGRLEM_ REV__ENSG00000067842|ENST00000263519|ATP2B3;REV__nc|ENSG00000067842|Q16720-2|ATP2B3;REV__nc|ENSG00000067842|Q16720-3|ATP2B3;REV__nc|ENSG00000067842|Q16720-4|ATP2B3;REV__nc|ENSG00000067842|Q16720-5|ATP2B3;REV__nc|ENSG00000067842|Q16720-6|ATP2B3;REV__nc|ENSG00000067842|Q16720-7|ATP2B3;REV__nc|ENSG00000067842|Q16720-8|ATP2B3 13.90604991867851 0.7054780292895731 1 YD{I|L}R{M(Oxidation (M))|F}Y 6 -1 + 76.49 0.0 0.0 8.7375 8.7375 94.704 0.0 0.0 0.0 36.197887582883936 9.852767431792929 9.852767431792929 9.852767431792929 0 0.7614393726401688 2.0 0.0 0.25 YD{I|L}R{M(Oxidation (M))|F}Y;YD{I|L}RY{M(Oxidation (M))|F};YDY[R{I|L}]{M(Oxidation (M))|F};YYD[R{I|L}]{M(Oxidation (M))|F};Y{[YC]|[HE]}{I|L}{[DS]|[MA]|[CV]|TT}{I|L} 8.7375;7.612;4.295;1.0305;0.13465 -;-;-;-;- 131 + 1 2.088 82505.8 1.0 4693 3546 8232 DOHH2_400M_050219_1,8241 DOHH2_400M_050219_1,8241,AEAGRLEM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8242 46.367 800.0 192310.0 25 0 11866.0 -1 0 123 769.0351128623674 2304.0835091873023 3 769.3694946169853 MULTI CID FTMS 0 0 0 8232 179494.6875 1.0 0 0.0 10 1 [MN]PN{I|L}[HD]Q{I|L}[HT]W{I|L}HEN{I|L} 17 -1 77.721 0.0 0.0 3.3732 0.0 0.0 0.0 208.0732363336547 208.0732363336547 64.7621328432004 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.4247425010840047 0.6549471895720984 [MN]PN{I|L}[HD]Q{I|L}[HT]W{I|L}HEN{I|L} 3.3732 - 6239 + 1 2.088 115626.8 0.7599999904632568 4694 3546 8232 DOHH2_400M_050219_1,8242 DOHH2_400M_050219_1,8242, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8243 46.373 338.0 285860.0 25 0 30334.0 + 20924 NLDIPEGPAVQY 12 94 658.3300557516388 1314.6455585700776 2 658.3304321169853 MULTI CID FTMS 0 0 0 8232 160801.890625 0.9508225453310444 -1 0.093963623046875 11 Unmodified _LNDWQRHAIY_ ENSG00000183111|ENST00000333677|ARHGEF37 25.399314129420983 0.3980215340001851 1 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L} 4 6 45.239 0.0 0.0 3.4411 0.0 0.0 0.0 856.3841504492369 856.3841504492369 8.33466091340155 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3054621874040891 0.6382104921644451 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L} 3.4411 - 1934 1 2.088 74173.5 1.0 4695 3546 8232 DOHH2_400M_050219_1,8243 DOHH2_400M_050219_1,8243,LNDWQRHAIY False False NLDIPEGPAVQY 46.37276 658.330432116985 1708155.125 8232.0 ENSG00000183111|ENST00000333677|ARHGEF37 7.666664918263753 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8244 46.383 601.0 419500.0 25 0 96608.0 31402 RPFAQVLL 8 152 472.288164993872 942.561777054544 2 472.2884704470634 MULTI CID FTMS 0 0 0 8232 156599.453125 0.045967650116567 -2 0.1478996276855468 12 Unmodified _RPFAQVLL_ ENST00000491430.1_1_1:234743015-234743087:-|nuORF 5.230669730166228 0.792582437072536 1 {M(Oxidation (M))|F} 1 7 9.464 0.0 0.0 1.0041 0.0 0.0 777.518958916652 0.0 777.518958916652 0.0 0.3731680914845192 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0041 + + 18 + 1 2.088 194980.4 1.0 4696 3546 8232 DOHH2_400M_050219_1,8244 DOHH2_400M_050219_1,8244,RPFAQVLL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8245 46.392 524.0 255280.0 25 0 23794.0 + 42175 VSDPTSGLDF 10 147 519.2430253674887 1036.471497801777 2 519.2432739138603 MULTI CID FTMS 0 0 0 8232 153450.125 1.0 0 0.0 13 Unmodified _VSDPTSGLDF_ ENSG00000213047|ENST00000620048|DENND1B 29.081581746732265 0.3152867722954398 1 [TP]SG{I|L}DSVD{M(Oxidation (M))|F} 10 6 + 44.966 0.0 0.0 4.3384 4.3384 77.977 0.0 0.0 0.0 5.752574989159953 11.20506544868192 5.752574989159953 5.752574989159953 0 0.8182503180159344 1.2218487496163564 1.1465912507003613 0.0 [TP]SG{I|L}DSVD{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}N{I|L}DSVD{M(Oxidation (M))|F};{[VA]|[{I|L}G]}DG{I|L}DSVD{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}GG{I|L}DSVD{M(Oxidation (M))|F};[TP]WWSVD{M(Oxidation (M))|F};[TP]SD{[VA]|[{I|L}G]}SVD{M(Oxidation (M))|F};[TP]SS[TP]SVD{M(Oxidation (M))|F};[TP]S{[RE]|[WV]}SVD{M(Oxidation (M))|F};[TP]SS[RD]{I|L}D{M(Oxidation (M))|F};{[VA]|[{I|L}G]}S[TP]DSVD{M(Oxidation (M))|F} 4.3384;3.7834;3.7607;3.5982;3.3387;3.2499;3.1977;3.1484;2.8482;2.8434 -;-;-;-;-;-;-;-;-;- 575 1 2.088 107223.3 1.0 4697 3546 8232 DOHH2_400M_050219_1,8245 DOHH2_400M_050219_1,8245,VSDPTSGLDF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8246 46.406 683.0 408420.0 25 0 53919.0 + 42923 VVRHLTVL 8 135 468.8034462424065 935.592339551613 2 468.8033019900322 MULTI CID FTMS 0 0 0 8232 97259.7109375 0.2630588671527304 -1 0.093963623046875 14 Unmodified _VVRHLTVL_ REV__ENSG00000158246|ENST00000289166|TENT5B 18.13498045792455 0.6430038125133779 1 VWH{I|L}VV{I|L} 7 -1 50.693 0.0 0.0 5.4183 0.0 0.0 71.07431227851718 0.0 71.07431227851718 0.0 37.30404512468539 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 VWH{I|L}VV{I|L} 5.4183 - 86 1 2.088 215995.8 1.0 4698 3546 8232 DOHH2_400M_050219_1,8246 DOHH2_400M_050219_1,8246,VVRHLTVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8247 46.419 800.0 140510.0 25 0 12388.0 + + 24502 MSSWRQVL 8 154 503.3306541331361 0 503.7610351443291 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _MIKIFKLL_ ENST00000496462.1_1_21:44524440-44524479:-|nuORF 6.354104778181461 0.5763711549229614 1 SSW 3 -1 12.307 0.0 0.0 1.225 0.0 0.0 130.17918513741 511.3007296197874 641.4799147571974 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SSW 1.225 - 70 + 1 2.088 87180.0 0.4399999976158142 4699 3546 8232 DOHH2_400M_050219_1,8247 DOHH2_400M_050219_1,8247,MIKIFKLL False False MSSWRQVL 46.419355 503.761035144329 518290.78125 8232.0 ENST00000496462.1_1_21:44524440-44524479:-|nuORF 4.386753400166829 2.0 False 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 8248 46.433 800.0 139690.0 25 0 26425.0 + 14351 IETKGLKIVIY 11 132 638.8954595101345 1275.776366087069 2 638.8953124880791 MULTI CID FTMS 0 0 0 8232 161408.96875 0.8359800734193404 5 -0.5956153869628906 16 Unmodified _IETKGLKIVIY_ REV__ENSG00000214814|ENST00000522917|FER1L6 2.9952420565917617 0.861016188266951 1 T{I|L}P[DG]DY 7 -1 24.288 0.0 0.0 1.9038 0.0 0.0 496.4323241942939 0.0 496.4323241942939 0.0 8.446216630164681 0.0 0.0 0 0.0 0.0 0.75 0.0 T{I|L}P[DG]DY 1.9038 - 443 + 1 2.088 86399.9 0.6499999761581421 4700 3546 8232 DOHH2_400M_050219_1,8248 DOHH2_400M_050219_1,8248,IETKGLKIVIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8249 46.444 543.0 313150.0 25 0 11020.0 + 25970 NLPPHIIRL 9 206 358.2254054873107 1071.6543870621322 3 358.2235900759697 MULTI CID FTMS 0 0 0 8232 123978.1328125 0.1064878496010403 33 -4.131126403808594 17 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 13.614867670302877 0.4681447649821485 1 {[QV]|[N{I|L}]|[RA]|[KV]}PPHR 6 3 45.947 0.0 0.0 4.2875 0.0 0.0 0.0 354.2301242159536 354.2301242159536 31.96780933001144 0.0 0.0 0.0 0 0.2302046884880938 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}PPHR 4.2875 - 66 + 1 2.088 137988.8 1.0 4701 3546 8232 DOHH2_400M_050219_1,8249 DOHH2_400M_050219_1,8249,NLPPHIIRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8250 46.458 800.0 110680.0 25 0 10515.0 -1 0 84 811.4025654100882 3241.581155773953 4 812.1545898318291 MULTI CID FTMS 0 0 0 8232 119537.421875 1.0 0 0.0 18 1 VM{[QN]|[E{I|L}]|[KN]} 4 -1 16.198 0.0 0.0 0.49969 0.0 0.0 2751.351551136286 0.0 2751.351551136286 0.0 7.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 VM{[QN]|[E{I|L}]|[KN]} 0.49969 - 57 1 2.088 71030.6 0.5699999928474426 4702 3546 8232 DOHH2_400M_050219_1,8250 DOHH2_400M_050219_1,8250, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8251 46.472 800.0 176880.0 25 0 18739.0 9339 FILKKLDSI 9 168 538.8395564922539 1075.6645600513075 2 538.8398315310478 MULTI CID FTMS 0 0 0 8232 108283.8515625 1.0 0 0.0 19 Unmodified _FILKKLDSI_ ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF;nc|ENSG00000175768|Q8N4H5-3|TOMM5 29.081581746732265 0.1611639662936252 1 {[QD]|[EN]|[WG]|[KD]|[RS]}SDQS 6 7 25.609 0.0 0.0 2.3807 0.0 0.0 0.0 412.4048914324202 412.4048914324202 7.649935615272902 0.0 0.0 0.0 0 0.0 0.0 1.4509697768504048 0.5649093276264391 {[QD]|[EN]|[WG]|[KD]|[RS]}SDQS 2.3807 - 569 1 2.088 110604.7 0.4900000095367431 4703 3546 8232 DOHH2_400M_050219_1,8251 DOHH2_400M_050219_1,8251,FILKKLDSI False True NEDSQSIVW 46.47157 538.839831531048 808426.5 8232.0 nc|ENSG00000130638|Q9UBB4-2|ATXN10;;ENSG00000130638|ENST00000252934|ATXN10 4.766053040822347 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8252 46.481 458.0 217990.0 25 0 30522.0 7643 EKFHYIYSC 9 121 595.2684807274638 1188.5224085217276 2 595.2689697146416 MULTI CID FTMS 0 0 0 8232 103333.5703125 0.7742665870235403 -1 0.093963623046875 20 Unmodified _EKFHYIYSC_ ENSG00000078142|ENST00000262039|PIK3C3;ENST00000590220.1_1_18:39535256-39537708:+|nuORF 13.90604991867851 0.4602628045680013 1 {I|L}SEQRW 6 9 57.414 0.0 0.0 4.8307 0.0 0.0 371.11418371324754 0.0 371.11418371324754 0.0 33.823134978585614 0.0 0.0 0 1.325257498915995 0.0 0.3807196863200844 0.6989700043360187 {I|L}SEQRW 4.8307 - 391 + 1 2.088 77074.3 1.0 4704 3546 8232 DOHH2_400M_050219_1,8252 DOHH2_400M_050219_1,8252,EKFHYIYSC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8254 46.485 71.0 956140.0 25 0 159850.0 + -1 WQLTMKKKV 9 105 589.3433184242272 1176.6720839152542 2 589.3433105349541 MULTI CID FTMS 0 0 0 8253 739086.5625 0.2252932508188024 5 -0.5411911010742188 1 Oxidation (M) _WQLTM(Oxidation (M))KKKV_ REV__ENST00000466094.5_1_7:107220736-107227893:+|nuORF;REV__ENST00000486326.5_1_7:107220736-107234551:+|nuORF 1.844237919475145 0.850302753031785 1 Y 1 -1 13.979 0.0 0.0 1.188 0.0 0.0 995.5975885312685 0.0 995.5975885312685 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.188 - 14 + 1 2.088 56427.4 1.0 4705 3547 8253 DOHH2_400M_050219_1,8254 DOHH2_400M_050219_1,8254,WQLTMKKKV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8255 46.487 88.0 577050.0 25 0 33268.0 + 41002 VMAPRTVLL 9 91 500.3044714417434 998.5943899502868 2 500.3047668337822 MULTI CID FTMS 0 0 0 8253 244424.703125 0.025913820776861 4 -0.4407386779785156 2 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 22.736283301280096 0.2418982879461534 1 VMA 3 6 50.93 0.0 0.0 5.1002 0.0 0.0 0.0 694.4292001856863 694.4292001856863 38.94016261540408 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + VMA 5.1002 + + 44 + 1 2.088 42265.4 1.0 4706 3547 8253 DOHH2_400M_050219_1,8255 DOHH2_400M_050219_1,8255,VMAPRTVLL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8256 46.489 30.0 1477300.0 25 0 373570.0 + 25990 NLSKKKSR 8 52 480.8013679879589 959.5881830427178 2 480.8012267947197 MULTI CID FTMS 0 0 0 8253 1754707.75 0.8685688977404723 -1 0.154876708984375 3 Unmodified _NLSKKKSR_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__ENST00000505431.1_1_5:37205375-37206408:-|nuORF;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 0.7936320650641473 0.8195151834710337 1 P 1 -1 2.2185 0.0 0.0 0.23119 0.0 0.0 761.4698796753335 98.0379885309203 859.5078682062538 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.23119 - 5 + 1 2.088 42622.0 1.0 4707 3547 8253 DOHH2_400M_050219_1,8256 DOHH2_400M_050219_1,8256,NLSKKKSR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8257 46.49 38.0 1460600.0 25 0 217380.0 + 179 AANPHSFVF 9 78 495.2456669637977 988.4767809943954 2 495.2458373904228 MULTI CID FTMS 0 0 0 8253 1507685.25 0.4192067788876703 -1 0.154876708984375 4 Unmodified _AANPHSFVF_ ENSG00000130810|ENST00000253107|PPAN;nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN 65.23502041540118 0.0231836506122253 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{M(Oxidation (M))|F}NAAV{M(Oxidation (M))|F} 9 6 + 45.842 0.0 0.0 4.6376 4.6376 72.645 0.0 0.0 0.0 3.0102999566398125 5.505507804616826 3.0102999566398125 0.4575749056067479 0 0.4247425010840047 0.0 0.7614393726401688 0.2887254899964357 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{M(Oxidation (M))|F}NAAV{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{M(Oxidation (M))|F}QQV{M(Oxidation (M))|F};[HS]{M(Oxidation (M))|F}PNAAV{M(Oxidation (M))|F};[HS]{M(Oxidation (M))|F}PQQV{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQQ{M(Oxidation (M))|F}V{M(Oxidation (M))|F};[HS]P{M(Oxidation (M))|F}NAAV{M(Oxidation (M))|F};[HS]P{M(Oxidation (M))|F}QQV{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQS{M(Oxidation (M))|F}V{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{M(Oxidation (M))|F}VNAA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{M(Oxidation (M))|F}VQQ{M(Oxidation (M))|F} 4.6376;4.5913;4.3331;4.2868;4.1937;4.1549;4.1086;3.9693;3.8081;3.7618 -;-;-;-;-;-;-;-;-;- 650 1 2.088 48702.7 1.0 4708 3547 8253 DOHH2_400M_050219_1,8257 DOHH2_400M_050219_1,8257,AANPHSFVF True True AANPHSFVF 46.489715 495.245837390423 47378404.0 8253.0 nc|ENSG00000130810|Q9NQ55-2|PPAN;;nc|ENSG00000130810|Q9NQ55-3|PPAN;;ENSG00000130810|ENST00000253107|PPAN 9.335353056589762 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8258 46.491 44.0 1455700.0 25 0 285860.0 30510 REHLKNTPKV 10 65 611.3563585133002 1220.6981640934002 2 611.3563110232353 MULTI CID FTMS 0 0 0 8253 1352436.75 0.5103971150741752 -3 0.3027763366699219 5 Unmodified _REHLKNTPKV_ ENSG00000163510|ENST00000410053|CWC22 1.4819007175156935 0.719781833666733 1 V 1 9 1.5938 0.0 0.0 0.13056 0.0 0.0 795.4416466146878 323.1729830377563 1118.614629652444 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.13056 + + 3 + 1 2.088 52869.2 1.0 4709 3547 8253 DOHH2_400M_050219_1,8258 DOHH2_400M_050219_1,8258,REHLKNTPKV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8259 46.493 85.0 483220.0 25 0 101650.0 30230 QWRRRPALR 9 52 619.8696626611791 1237.724772389158 2 619.8696777224541 MULTI CID FTMS 0 0 0 8253 556162.25 0.4287677842632043 -3 0.3027763366699219 6 Unmodified _QWRRRPALR_ ENST00000240139.9_1_8:22298692-22298875:+|nuORF 0.6014990680409731 0.8936861360942873 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.088 38125.0 1.0 4710 3547 8253 DOHH2_400M_050219_1,8259 DOHH2_400M_050219_1,8259,QWRRRPALR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8260 46.496 136.0 442100.0 25 0 156820.0 + 43002 VVVTRTLRV 9 62 521.8402773292071 1041.666001725214 2 521.8403198122978 MULTI CID FTMS 0 0 0 8253 433429.34375 0.866360476078725 -1 0.154876708984375 7 Unmodified _VVVTRTLRV_ REV__ENSG00000052795|ENST00000264433|FNIP2;REV__nc|ENSG00000052795|Q9P278-2|FNIP2 0.0 0.9146841635160942 1 Y 1 -1 1.1092 0.0 0.0 0.10649 0.0 0.0 343.11236510587656 532.4690035455686 875.5813686514452 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.10649 - 1 + 1 2.088 55343.4 1.0 4711 3547 8253 DOHH2_400M_050219_1,8260 DOHH2_400M_050219_1,8260,VVVTRTLRV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8261 46.497 64.0 1841000.0 25 0 153360.0 + 38587 TTDLELIKY 9 103 548.3010427567835 1094.587532580367 2 548.3011352419853 MULTI CID FTMS 0 0 0 8253 368562.40625 0.4916207691278418 -1 0.154876708984375 8 Unmodified _TTDLELIKY_ ENSG00000164109|ENST00000296509|MAD2L1;ENST00000511295.1_1_4:120986776-120987958:-|nuORF;nc|ENSG00000164109|Q13257-2|MAD2L1 59.05245873256422 0.0266066919017776 1 {[QN]|[E{I|L}]|[KN]}D{I|L}TT{I|L}YK 9 6 + 52.001 0.0 0.0 4.7507 4.7507 72.566 0.0 0.0 0.0 0.113907651700245 0.113907651700245 0.113907651700245 0.113907651700245 0 1.0731074559755158 1.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}D{I|L}TT{I|L}YK;{[DS]|[MA]|[CV]|TT}D{I|L}E{I|L}{I|L}YK;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}TT{I|L}YK;{[DS]|[MA]|[CV]|TT}D{I|L}E{I|L}{I|L}KY;{[QN]|[E{I|L}]|[KN]}{I|L}DTT{I|L}YK;{[DS]|[MA]|[CV]|TT}D{I|L}{I|L}E{I|L}YK;{[QN]|[E{I|L}]|[KN]}[WM]{I|L}{I|L}YK;[VG][WQ]TT{I|L}YK;{[QN]|[E{I|L}]|[KN]}{I|L}{[MG]|[TS]}E{I|L}YK;[PS]D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}YK 4.7507;4.7403;4.4757;4.4474;4.3148;4.2222;3.8773;3.7292;3.5516;3.5362 -;-;-;+;-;-;-;-;-;- + 521 1 2.088 92872.5 1.0 4712 3547 8253 DOHH2_400M_050219_1,8261 DOHH2_400M_050219_1,8261,TTDLELIKY True True TTDLELIKY 46.497201 548.301135241985 3937662.5 8253.0 nc|ENSG00000164109|Q13257-2|MAD2L1;;ENST00000511295.1_1_4:120986776-120987958:-|nuORF;;ENSG00000164109|ENST00000296509|MAD2L1 6.119237740834554 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8262 46.5 151.0 324450.0 25 0 52696.0 38179 TPRARARRLW 10 75 641.8824425367899 1281.7503321403797 2 641.8824951052666 MULTI CID FTMS 0 0 0 8253 331288.9375 0.6827897312765314 1 -0.1003227233886718 9 Unmodified _TPRARARRLW_ ENSG00000179698|ENST00000323662|WDR97;nc|ENSG00000179698|A6NE52-2|WDR97 1.6526216038709556 0.7189921496796233 1 W 1 9 12.218 0.0 0.0 0.95327 0.0 0.0 1077.660043909714 0.0 1077.660043909714 0.0 11.505149978319904 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 0.95327 + + 18 + 1 2.088 43608.3 1.0 4713 3547 8253 DOHH2_400M_050219_1,8262 DOHH2_400M_050219_1,8262,TPRARARRLW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8263 46.503 124.0 554280.0 25 0 50789.0 + 21014 LNVRRWDK 8 110 543.8096986440046 1085.604844354809 2 544.3098632693291 MULTI CID FTMS 0 0 0 8253 267544.28125 0.45241718304676 2 -0.1902122497558593 10 Unmodified _LNVRRWDK_ REV__ENST00000414195.6_1_2:145780810-145939628:+|nuORF;REV__ENST00000420472.1_1_2:145780789-145929735:+|nuORF;REV__ENST00000451478.5_1_2:145780789-145939807:+|nuORF;REV__ENST00000596034.5_2_2:145780810-145939776:+|nuORF;REV__ENST00000608432.5_2_2:145780810-145939776:+|nuORF;REV__ENST00000609705.5_1_2:145780810-145938583:+|nuORF 5.230669730166228 0.792582437072536 1 {[QV]|[N{I|L}]|[RA]|[KV]}V 3 -1 14.856 0.0 0.0 1.3684 0.0 0.0 0.0 756.3876256870934 756.3876256870934 1.7567589191195658 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.1923877696554315 {[QV]|[N{I|L}]|[RA]|[KV]}V 1.3684 + + 121 1 2.088 62180.8 1.0 4714 3547 8253 DOHH2_400M_050219_1,8263 DOHH2_400M_050219_1,8263,LNVRRWDK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8264 46.505 76.0 623260.0 25 0 134700.0 + 17393 KMKLIFVV 8 62 489.3145218091536 976.6144906851072 2 489.3143798708916 MULTI CID FTMS 0 0 0 8253 253201.296875 0.4394394388151076 -1 0.154876708984375 11 Unmodified _KMKLIFVV_ REV__ENSG00000181104|ENST00000319211|F2R 0.0 0.8243325171867699 1 {I|L} 1 -1 9.3323 0.0 0.0 0.95558 0.0 0.0 845.5188161019025 0.0 845.5188161019025 0.0 6.858055349748442 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.95558 + + 3 + 1 2.088 42480.4 1.0 4715 3547 8253 DOHH2_400M_050219_1,8264 DOHH2_400M_050219_1,8264,KMKLIFVV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8265 46.511 340.0 278940.0 25 0 55446.0 + 30201 QVVLVLERPAW 11 94 655.3822190894778 1308.7498852457554 2 655.3812133669853 MULTI CID FTMS 0 0 0 8253 211895.234375 0.2926962973655446 -6 0.6060791015625 12 Unmodified _QVVLVLERPAW_ REV__ENSG00000168282|ENST00000305386|MGAT2 1.3295316138638542 0.8688751186870782 1 W 1 -1 3.4949 0.0 0.0 0.26704 0.0 0.0 786.5393882748555 333.09629236392817 1119.6356806387837 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.26704 + + 3 + 1 2.088 93950.0 1.0 4716 3547 8253 DOHH2_400M_050219_1,8265 DOHH2_400M_050219_1,8265,QVVLVLERPAW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8266 46.513 127.0 435830.0 25 0 33847.0 + 25829 NLDIIQQEY 9 96 568.2859834338091 1134.557413934418 2 568.2858764529228 MULTI CID FTMS 0 0 0 8253 216856.984375 0.4035781806347335 1 -0.1003227233886718 13 Unmodified _NLDIIQQEY_ ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 24.020572477871973 0.2255576514309169 1 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L} 4 5 26.075 0.0 0.0 2.2982 0.0 0.0 0.0 676.2955175323274 676.2955175323274 10.5902924611682 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.2887254899964357 + {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L} 2.2982 + + 123 1 2.088 47061.0 1.0 4717 3547 8253 DOHH2_400M_050219_1,8266 DOHH2_400M_050219_1,8266,NLDIIQQEY False True NLDIIQQEY 46.513321 568.285876452923 3126050.5 8253.0 ENSG00000115368|ENST00000314761|WDR75;;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 0.872592051823934 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8267 46.519 309.0 229970.0 25 0 23038.0 + -1 SNVKLKVFLC 10 113 604.3483397824688 1206.6821266317374 2 604.3491699099541 MULTI CID FTMS 0 0 0 8253 201176.25 0.2637699463105133 -2 0.24884033203125 14 Carbamidomethyl (C) _SNVKLKVFLC(Carbamidomethyl (C))_ REV__ENST00000370920.7_1_1:71530559-71530637:-|nuORF 3.5964929083625545 0.7100006075494749 1 Y 1 -1 13.099 0.0 0.0 1.0855 0.0 0.0 1025.6076922829077 0.0 1025.6076922829077 0.0 1.6789605096159654 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0855 - 20 + 1 2.088 53643.4 1.0 4718 3547 8253 DOHH2_400M_050219_1,8267 DOHH2_400M_050219_1,8267,SNVKLKVFLC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8268 46.523 202.0 351730.0 25 0 22336.0 + + 22978 YMKEKLLF 8 119 536.2984796103127 1070.582406287425 2 536.2976562380791 MULTI CID FTMS 0 0 0 8253 179372.921875 1.0 0 0.0 15 Oxidation (M) _LSGKLFM(Oxidation (M))LF_ ENST00000453153.6_2_2:170428583-170430242:-|nuORF 43.85829265575387 0.0542763391141878 1 YM[RH]{I|L}{I|L}GD 8 -1 47.598 0.0 0.0 4.446 0.0 0.0 0.0 82.06699548892811 82.06699548892811 29.14123031884857 0.0 0.0 0.0 0 0.4005149978319906 2.0 0.566901560044258 0.0 YM[RH]{I|L}{I|L}GD 4.446 - 449 + 1 2.088 58449.4 1.0 4719 3547 8253 DOHH2_400M_050219_1,8268 DOHH2_400M_050219_1,8268,LSGKLFMLF False False YMKEKLLF 46.522846 536.297656238079 1286227.625 8253.0 ENST00000453153.6_2_2:170428583-170430242:-|nuORF 1.774332046508789 2.0 False 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 8269 46.537 800.0 137270.0 25 0 43495.0 + 20176 LKTPRLLNKTH 11 117 660.9086215314882 1319.8026901297762 2 660.9096557497978 MULTI CID FTMS 0 0 0 8253 139257.265625 0.5125466153272656 -3 0.3027763366699219 16 Unmodified _LKTPRLLNKTH_ REV__ENSG00000134588|ENST00000511190|USP26 2.498486711656943 0.8633599123570009 1 Y 1 -1 11.99 0.0 0.0 0.90845 0.0 0.0 1138.7279506051652 0.0 1138.7279506051652 0.0 1.2763625255165325 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.90845 - 51 + 1 2.088 90760.0 0.7200000286102295 4720 3547 8253 DOHH2_400M_050219_1,8269 DOHH2_400M_050219_1,8269,LKTPRLLNKTH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8270 46.548 675.0 284100.0 25 0 61679.0 -1 0 169 384.2337884327501 766.4530239323002 2 384.7326843142509 MULTI CID FTMS 0 0 0 8253 141561.421875 1.0 0 0.0 17 1 {M(Oxidation (M))|F} 1 -1 11.259 0.0 0.0 1.469 0.0 0.0 601.3734626303456 0.0 601.3734626303456 0.0 3.0487340999712664 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.469 - 19 + 1 2.088 151626.5 1.0 4721 3547 8253 DOHH2_400M_050219_1,8270 DOHH2_400M_050219_1,8270, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8271 46.556 430.0 485060.0 25 0 42508.0 + 653 AELTEEINKW 10 145 616.811604068298 1231.608655203396 2 616.8113281130791 MULTI CID FTMS 0 0 0 8253 143408.171875 0.345518618076563 -1 0.154876708984375 18 Unmodified _AELTEEINKW_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 133.0521902211835 0.0002107067494628 1 {[CP]|[EA]}{I|L}TEE{I|L}NKW 10 0 + 105.63 0.0 0.0 8.5765 8.5765 92.649 0.0 0.0 0.0 51.70973901562161 12.306634937682176 12.306634937682176 9.164539485499262 0 1.8778623208748888 0.0 1.110924374808178 2.3045970543767123 + + {[CP]|[EA]}{I|L}TEE{I|L}NKW;{[CP]|[EA]}{I|L}TEE{I|L}GGKW;{[CP]|[EA]}{I|L}TEE{I|L}[HK]Y;{[CP]|[EA]}{I|L}TEEKT{I|L}[QA];{[QN]|[E{I|L}]|[KN]}ATEEKT{I|L}[QA];{[CP]|[EA]}{I|L}TEKET{I|L}[QA];{[CP]|[EA]}{I|L}TEE{I|L}[MT][VP];{[QN]|[E{I|L}]|[KN]}ATERTT{I|L}[QA];{[QN]|[E{I|L}]|[KN]}ATEKET{I|L}[QA];{[QN]|[E{I|L}]|[KN]}TAEEKT{I|L}[QA] 8.5765;7.8324;6.8672;5.4559;5.0715;4.9163;4.7375;4.6148;4.5319;4.4605 +;-;-;-;-;-;-;-;-;- + 11194 + 1 2.088 153641.7 1.0 4722 3547 8253 DOHH2_400M_050219_1,8271 DOHH2_400M_050219_1,8271,AELTEEINKW True True AELTEEINKW 46.556086 616.811328113079 2718887.5 8253.0 nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;nc|ENSG00000072571|O75330-4|HMMR;;ENSG00000072571|ENST00000393915|HMMR 7.754415988922119 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8272 46.571 800.0 99242.0 25 0 7113.1 + 42917 VVQMLFLKW 9 125 582.33515182217 1162.65575071114 2 582.3361083865166 MULTI CID FTMS 0 0 0 8253 111922.7265625 0.1158629128468428 7 -0.8116874694824219 19 Unmodified _VVQMLFLKW_ REV__ENST00000380698.4_1_6:2900796-2903441:-|nuORF 3.944395688203298 0.7769873103969335 1 Y 1 -1 13.099 0.0 0.0 1.1266 0.0 0.0 981.5814079150448 0.0 981.5814079150448 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1266 - 98 + 1 2.088 65584.3 0.6200000047683716 4723 3547 8253 DOHH2_400M_050219_1,8272 DOHH2_400M_050219_1,8272,VVQMLFLKW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8273 46.581 560.0 228920.0 25 0 15369.0 + 41069 VMRLTISY 8 153 491.7724356265546 981.5303183199092 2 491.7738220095634 MULTI CID FTMS 0 0 0 8253 113277.9140625 1.0 0 0.0 20 Unmodified _VMRLTISY_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 49.93300154707207 0.1395624531867191 1 [{I|L}T][TA]{I|L}T{I|L}SY 9 4 + 48.263 0.0 0.0 4.9172 4.9172 76.454 0.0 0.0 0.0 2.4667233334138814 14.79436010809259 2.4667233334138814 2.4667233334138814 0 1.0 1.154901959985743 0.7134679910804405 0.0 [{I|L}T][TA]{I|L}T{I|L}SY;{[TV]|[{I|L}S]}[VS]{I|L}T{I|L}SY;[{I|L}T][TA]{I|L}G{I|L}MY;{[TV]|[{I|L}S]}[VS]{I|L}G{I|L}MY;[{I|L}T][WR]{I|L}MY;[{I|L}T][TA]{I|L}G{I|L}YM;{[TV]|[{I|L}S]}[VS]{I|L}G{I|L}YM;[{I|L}T][WR]{I|L}YM;[NP]G{I|L}T{I|L}[TA][VP] 4.9172;4.6659;3.1822;2.9309;2.5813;1.8926;1.6412;1.2916;1.0787 -;-;-;-;-;-;-;-;- 232 1 2.088 102855.4 1.0 4724 3547 8253 DOHH2_400M_050219_1,8273 DOHH2_400M_050219_1,8273,VMRLTISY False True VMRLTISY 46.58091 491.773822009563 521786.6875 8253.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 3.354334990183512 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8275 46.586 43.0 1074700.0 25 0 272910.0 + 37841 TLTSKLYSL 9 76 513.2975803102713 1024.5806076873423 2 513.2978393435478 MULTI CID FTMS 0 0 0 8274 855601.375 0.2266329062054233 1 -0.0898895263671875 1 Unmodified _TLTSKLYSL_ ENSG00000184076|ENST00000330029|UQCR10;nc|ENSG00000184076|Q9UDW1-2|UQCR10 37.97399986684836 0.0865783450051559 1 [{I|L}T][KS]YS{I|L}[{I|L}T] 9 4 + 51.845 0.0 0.0 5.0601 5.0601 87.177 0.0 0.0 0.0 14.70036776622556 5.642492736872597 5.642492736872597 14.70036776622556 0 0.5 2.0 1.274227503252014 0.0 [{I|L}T][KS]YS{I|L}[{I|L}T];[KS]T{I|L}YS{I|L}[{I|L}T];[KS]TY{I|L}S{I|L}[{I|L}T];{[TV]|[{I|L}S]}[KT]YS{I|L}[{I|L}T];{[TV]|[{I|L}S]}Y[KT]S{I|L}[{I|L}T] 5.0601;3.6254;2.5286;2.1544;1.0577 -;-;-;-;- 162 1 2.085 39225.8 1.0 4725 3548 8274 DOHH2_400M_050219_1,8275 DOHH2_400M_050219_1,8275,TLTSKLYSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8276 46.587 41.0 1567900.0 25 0 184200.0 + 31637 RRFTEIYEF 9 58 420.8840312715759 1259.6302644149278 3 420.8840209841728 MULTI CID FTMS 0 0 0 8274 946326.75 0.2957357735089895 1 -0.0898895263671875 2 Unmodified _RRFTEIYEF_ chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1;nc|ENSG00000165178|A8MVU1|NCF1C;nc|ENSG00000290838|A6NI72|NCF1B 17.11289562659939 0.3734572693229295 1 {I|L}YE{M(Oxidation (M))|F} 4 5 33.175 0.0 0.0 2.6337 0.0 0.0 689.362208741113 0.0 689.362208741113 0.0 16.97743773147742 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}YE{M(Oxidation (M))|F} 2.6337 + + 33 1 2.085 59536.7 1.0 4726 3548 8274 DOHH2_400M_050219_1,8276 DOHH2_400M_050219_1,8276,RRFTEIYEF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8277 46.59 134.0 761600.0 25 0 81225.0 + 16706 KESTLHLVL 9 100 520.3110309473215 1038.6075089614428 2 520.3112670779228 MULTI CID FTMS 0 0 0 8274 531092.375 0.987410498080311 -1 0.1003227233886718 3 Unmodified _KESTLHLVL_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 78.7280429016045 0.0178249292250809 1 [H{I|L}]TSEK{I|L}V{I|L} 9 6 + 76.34 0.0 0.0 7.3502 7.3502 93.041 0.0 0.0 0.0 14.59491766415944 54.573799922781134 14.59491766415944 10.510299956639813 0 0.75 1.0457574905606752 0.6505149978319906 0.805462187404089 [H{I|L}]TSEK{I|L}V{I|L};[H{I|L}]TS{I|L}EKV{I|L};[H{I|L}]TSE{I|L}KV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[MG]|[TS]}H{I|L}V{I|L};[H{I|L}]TS{I|L}[SG]{I|L}V{I|L};[{I|L}V]{[SA]|[TG]}{[MG]|[TS]}H{I|L}V{I|L};[H{I|L}]TS{I|L}V{[SA]|[TG]}V{I|L};[H{I|L}][WM]K{I|L}V{I|L};{[MG]|[TS]}[H{I|L}]EK{I|L}V{I|L};[H{I|L}]TS{I|L}EVK{I|L} 7.3502;6.3382;6.1687;5.8754;5.8576;5.6286;4.9648;4.8745;4.7345;4.5974 -;-;-;-;-;-;-;-;-;- 495 1 2.085 77989.6 1.0 4727 3548 8274 DOHH2_400M_050219_1,8277 DOHH2_400M_050219_1,8277,KESTLHLVL True True KESTLHLVL 46.589946 520.311267077923 3379107.0 8274.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC;;ENST00000392399.3_1_2:137087013-137087097:-|nuORF 3.3062191804250083 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8278 46.604 800.0 108950.0 25 0 6776.0 -1 0 92 993.5564342948562 1985.0983156565123 2 994.0579711794852 MULTI CID FTMS 0 0 0 8274 117313.984375 1.0 0 0.0 4 1 [{I|L}A]TGQ 5 -1 42.157 0.0 0.0 2.1237 0.0 0.0 0.0 1511.8245784341093 1511.8245784341093 16.28119877495953 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.0501648626366045 0.0 [{I|L}A]TGQ 2.1237 - 962 1 2.085 63225.2 0.699999988079071 4728 3548 8274 DOHH2_400M_050219_1,8278 DOHH2_400M_050219_1,8278, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8279 46.61 316.0 255740.0 25 0 14272.0 + 29077 QELLQTQDF 9 135 561.2772993827863 1120.5400458323725 2 561.2775756716728 MULTI CID FTMS 0 0 0 8274 120758.578125 0.8089130061627089 -1 0.1003227233886718 5 Unmodified _QELLQTQDF_ ENSG00000110047|ENST00000320631|EHD1;ENST00000484846.1_1_11:64621807-64623066:-|nuORF 81.89019881105858 0.0170587746866453 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}Q 5 4 40.295 0.0 0.0 3.5961 0.0 0.0 0.0 506.1879699869225 506.1879699869225 15.483324797206285 0.0 0.0 0.0 0 0.0 0.0 1.3684151806525389 1.066901560044258 + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}Q 3.5961 + + 333 1 2.085 65257.3 1.0 4729 3548 8274 DOHH2_400M_050219_1,8279 DOHH2_400M_050219_1,8279,QELLQTQDF True True QELLQTQDF 46.609575 561.277575671673 966612.6875 8274.0 ENST00000484846.1_1_11:64621807-64623066:-|nuORF;;ENSG00000110047|ENST00000320631|EHD1 6.217315673828125 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8280 46.623 800.0 150210.0 25 0 18227.0 20918 LNALRRHKE 9 157 568.8350939861767 1135.6556350391534 2 568.8353149294853 MULTI CID FTMS 0 0 0 8274 98773.78125 0.253622070848797 2 -0.208587646484375 6 Unmodified _LNALRRHKE_ ENSG00000015133|ENST00000389857|CCDC88C 3.944395688203298 0.7769873103969335 1 YY 2 9 17.959 0.0 0.0 1.5814 0.0 0.0 791.5178614569253 0.0 791.5178614569253 0.0 -0.4048498545736869 -0.4048498545736869 0.0 0 0.0 0.0 0.0 0.0 YY 1.5814 - 429 + 1 2.085 91002.0 0.550000011920929 4730 3548 8274 DOHH2_400M_050219_1,8280 DOHH2_400M_050219_1,8280,LNALRRHKE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8281 46.637 800.0 110620.0 25 0 29647.0 -1 QLPLVLLRLLC 11 127 669.4215007456713 1336.8284485581426 2 669.4221679568291 MULTI CID FTMS 0 0 0 8274 94383.234375 0.477142598054913 -2 0.2551994323730469 7 Carbamidomethyl (C) _QLPLVLLRLLC(Carbamidomethyl (C))_ ENSG00000185565|ENST00000490035|LSAMP 2.9952420565917617 0.861016188266951 1 W 1 -1 13.099 0.0 0.0 0.97985 0.0 0.0 1132.7381450686878 0.0 1132.7381450686878 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.97985 - 159 + 1 2.085 69195.8 0.6000000238418579 4731 3548 8274 DOHH2_400M_050219_1,8281 DOHH2_400M_050219_1,8281,QLPLVLLRLLC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8282 46.651 800.0 188390.0 25 0 21062.0 + 44172 YLDWAYRSGGY 11 116 675.8095837501371 1349.604614567074 2 675.8101684451103 MULTI CID FTMS 0 0 0 8274 91811.640625 0.8614668824752304 -1 0.1003227233886718 8 Unmodified _YLDWAYRSGGY_ ENSG00000108651|ENST00000261708|UTP6;ENST00000477860.1_1_17:30200326-30200766:-|nuORF 68.75988807550267 0.0359983986270074 1 Y{I|L}DWAY{M(Oxidation (M))|F}D 8 5 89.576 0.0 0.0 6.6372 0.0 0.0 0.0 273.125254912037 273.125254912037 64.16992713939968 0.0 0.0 0.0 0 0.6139829889124311 2.0 0.805462187404089 0.0 Y{I|L}DWAY{M(Oxidation (M))|F}D 6.6372 - 580 + 1 2.085 113571.3 0.6000000238418579 4732 3548 8274 DOHH2_400M_050219_1,8282 DOHH2_400M_050219_1,8282,YLDWAYRSGGY True True YLDWAYRSGGY 46.651083 675.81016844511 779386.75 8274.0 ENSG00000108651|ENST00000261708|UTP6;;ENST00000477860.1_1_17:30200326-30200766:-|nuORF 5.63835875193278 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8283 46.656 237.0 759470.0 25 0 45156.0 + 735 AEQDLIREL 9 153 543.7922555549061 1085.569958176612 2 543.7932006716728 MULTI CID FTMS 0 0 0 8274 194848.65625 0.3796026114297386 -1 0.1003227233886718 9 Unmodified _AEQDLIREL_ ENSG00000125124|ENST00000245157|BBS2;ENST00000561853.1_1_16:56536201-56536626:-|nuORF;ENST00000561951.5_1_16:56535647-56545169:-|nuORF;ENST00000565781.5_1_16:56536201-56536402:-|nuORF 81.9152076656658 0.0170527153246128 1 {[CP]|[EA]}QD{I|L}{I|L}RE{I|L} 9 0 {[CP]|[EA]} + + 62.251 4.9274 2.4627 5.7344 5.7344 59.352 0.0 0.0 0.0 0.0 18.397907125240103 0.0 0.0 0 2.254432191740108 0.0 1.055462187404089 0.7059771852360797 + + {[CP]|[EA]}QD{I|L}{I|L}RE{I|L} 5.7344 + + 2040 + 1 2.085 138797.8 1.0 4733 3548 8274 DOHH2_400M_050219_1,8283 DOHH2_400M_050219_1,8283,AEQDLIREL True True AEQDLIREL 46.655535 543.793200671673 3225054.25 8274.0 ENSG00000125124|ENST00000245157|BBS2;;ENST00000561853.1_1_16:56536201-56536626:-|nuORF;;ENST00000561951.5_1_16:56535647-56545169:-|nuORF;;ENST00000565781.5_1_16:56536201-56536402:-|nuORF 4.785728931427002 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8284 46.671 800.0 383050.0 25 0 25413.0 + 40056 VGGPEIEL 8 147 813.4357098303466 812.4284333637465 1 813.4357177615166 MULTI CID FTMS 0 0 0 8274 132732.0625 0.4100702456052206 -1 0.1003227233886718 10 Unmodified _VGGPEIEL_ ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5 93.88341677533236 0.0679596620250313 1 [EP]GGV{I|L}E{I|L} 8 4 + 72.005 0.0 0.0 8.8629 8.8629 83.396 0.0 0.0 0.0 6.020599913279625 16.40978057358332 6.020599913279625 0.5240357329983567 0 0.2614393726401688 0.744727494896694 1.3807196863200843 0.0 [EP]GGV{I|L}E{I|L};[EP]GG{I|L}VE{I|L};[EP]GG{I|L}EV{I|L};[PG]EGV{I|L}E{I|L};[EP]NV{I|L}E{I|L};[PG]EG{I|L}VE{I|L};[EP]N{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}PGGVE{I|L};[EP]G{I|L}GVE{I|L};[EP]GGVE{I|L}{I|L} 8.8629;8.7984;8.1326;8.1219;8.074;8.0574;8.0095;7.9404;7.8108;7.7442 -;-;-;-;-;-;-;-;-;- 5788 1 2.085 204688.8 0.6899999976158142 4734 3548 8274 DOHH2_400M_050219_1,8284 DOHH2_400M_050219_1,8284,VGGPEIEL True True VGGPEIEL 46.670845 813.435717761517 1627412.0 8274.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5;;ENST00000423695.6_1_5:10250480-10261980:+|nuORF 4.509076277414958 1.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8286 46.676 26.0 2123800.0 25 0 497990.0 20045 LIPFMPLL 8 56 472.288164993872 942.561777054544 2 472.2880737185478 MULTI CID FTMS 0 0 0 8285 2213552.25 0.6497583057427401 1 -0.1186981201171875 1 Unmodified _LIPFMPLL_ ENSG00000091428|ENST00000397081|RAPGEF4;nc|ENSG00000091428|Q8WZA2-2|RAPGEF4;nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;nc|ENSG00000091428|Q8WZA2-5|RAPGEF4 0.7936320650641473 0.8195151834710337 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.085 48408.9 1.0 4735 3549 8285 DOHH2_400M_050219_1,8286 DOHH2_400M_050219_1,8286,LIPFMPLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8287 46.677 31.0 1418600.0 25 0 366960.0 38286 TQDMFSPDQS 10 63 578.2366893979419 1154.4588258626836 2 578.2372314333916 MULTI CID FTMS 0 0 0 8285 1405723.125 0.3163204027466339 2 -0.2505264282226562 2 Unmodified _TQDMFSPDQS_ ENSG00000186174|ENST00000683865|BCL9L;nc|ENSG00000186174|Q86UU0-2|BCL9L;nc|ENSG00000186174|Q86UU0-3|BCL9L;nc|ENSG00000186174|Q86UU0-4|BCL9L 8.155526934196011 0.6889124077178598 1 [{M(Oxidation (M))|F}T]MYHMYY 8 8 [{M(Oxidation (M))|F}T]MYHM + + 17.959 16.348 2.0175 1.5556 1.5556 48.579 0.0 0.0 0.0 0.0 -6.776165928811153 -6.776165928811153 0.0 0 0.0 0.0 0.0 0.0 [{M(Oxidation (M))|F}T]MYHMYY 1.5556 - 138 + 1 2.085 41135.2 1.0 4736 3549 8285 DOHH2_400M_050219_1,8287 DOHH2_400M_050219_1,8287,TQDMFSPDQS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8288 46.678 44.0 1289400.0 25 0 240340.0 + 25475 NEKPVGSFW 9 81 532.263630619975 1062.5127083067498 2 532.2642700076103 MULTI CID FTMS 0 0 0 8285 1234462.5 0.8833375790162132 1 -0.1186981201171875 3 Unmodified _NEKPVGSFW_ ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2 49.55428908609986 0.0413471690215031 1 [VP]GS{M(Oxidation (M))|F}KENW 9 6 + 55.531 0.0 0.0 5.2264 5.2264 78.776 0.0 0.0 0.0 3.3535802444387386 9.208187539523747 3.3535802444387386 3.3535802444387386 0 0.4247425010840047 0.6575773191777937 1.5356668758921828 0.0 [VP]GS{M(Oxidation (M))|F}KENW;[KP]D{M(Oxidation (M))|F}KENW;[VP]GSK{M(Oxidation (M))|F}ENW;[KP]DK{M(Oxidation (M))|F}ENW;[VP]GS{M(Oxidation (M))|F}KEGGW;[KP]D{M(Oxidation (M))|F}KEGGW;[VP]GSK{M(Oxidation (M))|F}EGGW;{[QD]|[EN]|[WG]|[KD]|[RS]}K[VP][SG]{M(Oxidation (M))|F}W;[KP]DK{M(Oxidation (M))|F}EGGW;[VP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}KN{M(Oxidation (M))|F}W 5.2264;4.9107;4.7065;4.3909;4.3597;4.039;3.8398;3.655;3.5191;3.4306 -;-;-;-;-;-;-;+;-;- + 338 1 2.085 50091.7 1.0 4737 3549 8285 DOHH2_400M_050219_1,8288 DOHH2_400M_050219_1,8288,NEKPVGSFW True True NEKPVGSFW 46.678043 532.26427000761 9962523.0 8285.0 nc|ENSG00000136108|Q8WWK9-4|CKAP2;;nc|ENSG00000136108|Q8WWK9-6|CKAP2;;ENSG00000136108|ENST00000258607|CKAP2;;nc|ENSG00000136108|Q8WWK9|CKAP2 6.937106450398763 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8289 46.68 74.0 1490300.0 25 0 182470.0 + 2616 ASSGSPLY 8 108 391.18874237958096 780.3629318259619 2 391.1885864138603 MULTI CID FTMS 0 0 0 8285 1048910.0 0.532308513461196 -1 0.0898895263671875 4 Unmodified _ASSGSPLY_ REV__ENSG00000130479|ENST00000324096|MAP1S;REV__ENST00000601097.1_1_19:17843916-17845234:+|nuORF;REV__nc|ENSG00000130479|Q66K74-2|MAP1S 10.183394434864962 0.7604730176254005 1 MA{M(Oxidation (M))|F}H{I|L}Y 6 -1 + 59.672 0.0 0.0 7.6467 7.6467 95.89 0.0 0.0 0.0 25.29290666384 11.338031200885156 11.338031200885156 22.23828478979911 0 0.6307196863200843 1.6989700043360187 0.0 0.0 MA{M(Oxidation (M))|F}H{I|L}Y;{[{M(Oxidation (M))|F}H]|[RQ]}AM{I|L}Y;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}H{I|L}Y 7.6467;4.797;2.8934 -;-;- 71 + 1 2.085 88654.8 1.0 4738 3549 8285 DOHH2_400M_050219_1,8289 DOHH2_400M_050219_1,8289,ASSGSPLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8290 46.682 80.0 1138100.0 25 0 232640.0 + 31640 RRFTEIYEF 9 65 630.822318711543 1259.6300844898858 2 630.8225585818291 MULTI CID FTMS 0 0 0 8285 630174.4375 0.0778060708729455 2 -0.2505264282226562 5 Unmodified _RRFTEIYEF_ chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1;nc|ENSG00000165178|A8MVU1|NCF1C;nc|ENSG00000290838|A6NI72|NCF1B 29.081581746732265 0.1611639662936252 1 AN[EP]YE{M(Oxidation (M))|F} 7 5 40.31 0.0 0.0 3.2001 0.0 0.0 391.2878590314469 0.0 391.2878590314469 0.0 28.62736347801977 0.0 0.0 0 0.3807196863200844 0.0 0.0 1.2302046884880935 AN[EP]YE{M(Oxidation (M))|F} 3.2001 - 81 1 2.085 70265.6 1.0 4739 3549 8285 DOHH2_400M_050219_1,8290 DOHH2_400M_050219_1,8290,RRFTEIYEF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8291 46.688 353.0 438530.0 25 0 61408.0 13444 HLQIKWRVW 9 128 633.3691247518561 1264.7236965705122 2 633.3691284060478 MULTI CID FTMS 0 0 0 8285 304234.375 0.2898735674252081 3 -0.3509788513183594 6 Unmodified _HLQIKWRVW_ ENST00000351223.7_1_1:46049867-46067967:+|nuORF 8.593279151180031 0.6146971463335029 1 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}RNR{M(Oxidation (M))|F} 8 6 30.087 0.0 0.0 2.3789 0.0 0.0 0.0 212.1686248997929 212.1686248997929 16.90196080028514 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}RNR{M(Oxidation (M))|F} 2.3789 - 923 1 2.085 119096.1 1.0 4740 3549 8285 DOHH2_400M_050219_1,8291 DOHH2_400M_050219_1,8291,HLQIKWRVW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8292 46.694 346.0 434370.0 25 0 38111.0 -1 PHRKKKPF 8 147 360.5540015010298 1078.6401751032895 3 360.5537597537041 MULTI CID FTMS 0 0 0 8285 279178.46875 1.0 0 0.0 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PHRKKKPF_ ENSG00000135521|ENST00000367576|LTV1 10.073929032068715 0.7620901558688216 1 {M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{I|L}{M(Oxidation (M))|F}VR 8 -1 + 43.581 0.0 0.0 4.0404 4.0404 74.156 0.0 0.0 0.0 31.987606623646982 10.43305028184122 10.43305028184122 3.0102999566398125 0 0.9247425010840048 0.0 0.0 0.0 {M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{I|L}{M(Oxidation (M))|F}VR;{M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}{I|L}VR;{M(Oxidation (M))|F}{[RE]|[WV]}{M(Oxidation (M))|F}{I|L}{I|L}VR;{M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{I|L}[RV]{M(Oxidation (M))|F} 4.0404;3.7613;2.8094;2.328 -;-;-;- 154 + 1 2.085 120459.0 1.0 4741 3549 8285 DOHH2_400M_050219_1,8292 DOHH2_400M_050219_1,8292,PHRKKKPF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8293 46.701 377.0 477630.0 25 0 42576.0 7872 ELLRKEEY 8 142 540.2907456196905 1078.5669383061809 2 540.2911254763603 MULTI CID FTMS 0 0 0 8285 232054.234375 1.0 0 0.0 8 Unmodified _ELLRKEEY_ ENSG00000105722|ENST00000222329|ERF;ENST00000596818.1_1_19:42754481-42759151:-|nuORF 26.88365393820708 0.4786498634179528 1 {I|L}{I|L}{I|L}EY 5 4 43.756 0.0 0.0 4.0568 0.0 0.0 429.1976442923561 0.0 429.1976442923561 0.0 25.578190151087192 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {I|L}{I|L}{I|L}EY 4.0568 - 433 1 2.085 137180.8 1.0 4742 3549 8285 DOHH2_400M_050219_1,8293 DOHH2_400M_050219_1,8293,ELLRKEEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8294 46.709 459.0 305290.0 25 0 38494.0 12728 GVLWVPRS 8 146 457.2645582634801 912.5145635937604 2 457.2642089724541 MULTI CID FTMS 0 0 0 8285 226975.625 0.7521338809533327 -1 0.0898895263671875 9 Unmodified _GVLWVPRS_ ENST00000482171.5_1_2:130914007-130915206:-|nuORF 5.230669730166228 0.792582437072536 1 {I|L} 1 7 8.2103 0.0 0.0 0.89975 0.0 0.0 781.4194078093838 0.0 781.4194078093838 0.0 5.446115921708827 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.89975 + + 12 + 1 2.085 109116.6 1.0 4743 3549 8285 DOHH2_400M_050219_1,8294 DOHH2_400M_050219_1,8294,GVLWVPRS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8295 46.714 280.0 326380.0 25 0 34733.0 + 45341 YSNKEIFL 8 121 507.2689768818624 1012.5234008305248 2 507.2687866091728 MULTI CID FTMS 0 0 0 8285 189275.359375 1.0 0 0.0 10 Unmodified _YSNKEIFL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P 53.832793166522166 0.1212192986213991 1 {[QN]|[E{I|L}]|[KN]}SEY{I|L}{M(Oxidation (M))|F}{I|L} 8 4 + 54.529 0.0 0.0 5.3855 5.3855 57.985 0.0 0.0 0.0 4.771460743838404 16.40978057358332 4.771460743838404 0.0 0 1.0010912013506124 0.0 0.6861818737241735 0.7302046884880937 {[QN]|[E{I|L}]|[KN]}SEY{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}ESY{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SYE{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SE{I|L}Y{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}ES{I|L}Y{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}C]|[YS]}NKE{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}SY{M(Oxidation (M))|F}{I|L};[VS]{[QG]|[NA]}SY{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]N{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SEY{M(Oxidation (M))|F}{I|L}{I|L} 5.3855;5.3855;5.2577;4.9591;4.9591;4.9142;4.7356;4.4639;4.4212;4.2492 -;-;-;-;-;+;-;-;-;- + 698 1 2.085 72167.2 1.0 4744 3549 8285 DOHH2_400M_050219_1,8295 DOHH2_400M_050219_1,8295,YSNKEIFL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8296 46.722 458.0 307500.0 25 0 31671.0 + 33841 SLEKRCSL 8 143 468.2514787380265 934.488404542853 2 468.2509033083916 MULTI CID FTMS 0 0 0 8285 150280.796875 1.0 0 0.0 11 Unmodified _SLEKRCSL_ REV__ENSG00000143147|ENST00000682931|GPR161;REV__ENST00000493800.1_1_1:168059784-168074118:-|nuORF;REV__nc|ENSG00000143147|Q8N6U8-2|GPR161;REV__nc|ENSG00000143147|Q8N6U8-6|GPR161 54.773552608820026 0.1167943196628344 1 [RD]G{M(Oxidation (M))|F}{I|L}QS{I|L} 8 -1 + 51.847 0.0 0.0 5.5482 5.5482 82.482 0.0 0.0 0.0 5.967405279270849 12.278426852842514 5.967405279270849 5.967405279270849 0 0.9247425010840048 0.0 0.0 0.3494850021680094 [RD]G{M(Oxidation (M))|F}{I|L}QS{I|L};[AG]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QS{I|L};[AG]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}QS{I|L};[RD]G{M(Oxidation (M))|F}{I|L}[AG]S{I|L};[{M(Oxidation (M))|F}V]Q{I|L}[C(Carbamidomethyl (C))R]{I|L};[{M(Oxidation (M))|F}V]Q{I|L}TQS{I|L};{[QS]|[NT]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QS{I|L};[{M(Oxidation (M))|F}V]Q[WR]S{I|L};[{M(Oxidation (M))|F}V]Q[C(Carbamidomethyl (C))R]{I|L}{I|L};[Q{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}QS{I|L} 5.5482;4.9096;4.6703;4.5571;4.2343;4.1436;4.1365;3.9409;3.7237;3.7158 -;-;-;-;-;-;-;-;-;- 261 1 2.085 110842.4 1.0 4745 3549 8285 DOHH2_400M_050219_1,8296 DOHH2_400M_050219_1,8296,SLEKRCSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8297 46.736 800.0 213670.0 25 0 15545.0 + 36798 TEHYDIPKVSW 11 135 458.8945975911736 1373.661963373721 3 458.8945190310478 MULTI CID FTMS 0 0 0 8285 146424.484375 1.0 0 0.0 12 Unmodified _TEHYDIPKVSW_ ENSG00000105058|ENST00000263384|FAM32A;nc|ENSG00000105058|Q9Y421-3|FAM32A 61.60191391372663 0.0626439052904852 1 {[WN]|[YH]}DET{I|L} 6 8 40.265 0.0 0.0 2.9312 0.0 0.0 0.0 612.3142312913628 612.3142312913628 19.29107306486454 0.0 0.0 0.0 0 0.4247425010840047 0.958607314841775 1.4291746928241125 0.0 {[WN]|[YH]}DET{I|L} 2.9312 - 521 1 2.085 142665.5 0.5400000214576721 4746 3549 8285 DOHH2_400M_050219_1,8297 DOHH2_400M_050219_1,8297,TEHYDIPKVSW True True TEHYDIPKVSW 46.736228 458.8951 1230461.125 8285.0 ENSG00000105058|ENST00000263384|FAM32A;;nc|ENSG00000105058|Q9Y421-3|FAM32A 7.438490867614746 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8298 46.743 297.0 295360.0 25 0 11990.0 + 6885 EEEPLNIHSF 10 112 607.7869339213942 1213.5593149095882 2 607.7877685427666 MULTI CID FTMS 0 0 0 8285 137601.671875 0.8658503732302264 -1 0.0898895263671875 13 Unmodified _EEEPLNIHSF_ ENSG00000180376|ENST00000394672|CCDC66;nc|ENSG00000180376|A2RUB6-3|CCDC66 110.6747026088012 0.0022459829274162 1 EEEP{I|L}N{I|L}HS{M(Oxidation (M))|F} 10 0 + 88.771 0.0 0.0 7.3149 7.3149 93.502 0.0 0.0 0.0 22.754537344402905 19.424161275986947 19.424161275986947 12.417114474659217 0 0.6382104921644451 1.6989700043360187 2.1791746928241125 0.3252574989159953 + + EEEP{I|L}N{I|L}HS{M(Oxidation (M))|F};EEEP{I|L}GG{I|L}HS{M(Oxidation (M))|F};EEEP{I|L}N{I|L}HAY;EEEP{I|L}GG{I|L}HAY;[{I|L}P]N[YE]{I|L}PE[HC];[{I|L}P][YE]N{I|L}PE[HC];[EP][Y{I|L}]N{I|L}PE[HC];[{I|L}P]N{I|L}[YE]PE[HC];[{I|L}P]N{I|L}HS{M(Oxidation (M))|F}{M(Oxidation (M))|F}[HC];EEEP[YE]KKY 7.3149;6.2917;5.7143;4.6911;4.6377;4.6157;4.0328;3.7706;3.6597;3.6566 +;-;-;-;-;-;-;-;-;- + 820 + 1 2.085 65731.5 1.0 4747 3549 8285 DOHH2_400M_050219_1,8298 DOHH2_400M_050219_1,8298,EEEPLNIHSF True True EEEPLNIHSF 46.742851 607.787768542767 1087191.875 8285.0 nc|ENSG00000180376|A2RUB6-3|CCDC66;;ENSG00000180376|ENST00000394672|CCDC66 8.804495493570963 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8299 46.753 580.0 207940.0 25 0 11652.0 + 5537 DMKIRLFTS 9 164 555.80186331535 1109.5891736975 2 555.8029662966728 MULTI CID FTMS 0 0 0 8285 109885.671875 1.0 0 0.0 14 Unmodified _DMKIRLFTS_ ENSG00000075188|ENST00000552283|NUP37;ENST00000551200.5_1_12:102471044-102512308:-|nuORF 48.07275321834293 0.0445955024081691 1 DMK{I|L}R{I|L}{M(Oxidation (M))|F}TS 9 0 + 80.627 0.0 0.0 7.2664 7.2664 94.334 0.0 0.0 0.0 30.74193080067864 16.141019774167475 16.141019774167475 16.141019774167475 0 2.1791746928241125 1.6989700043360187 1.2038271422956004 0.0 + + DMK{I|L}R{I|L}{M(Oxidation (M))|F}TS;DMK{I|L}R{I|L}[TA]Y;DMK{I|L}RH[TP]{I|L};DMK{I|L}RH[{I|L}T]P;DMK{I|L}R{I|L}[HT]P;[MD]K{I|L}R{I|L}{M(Oxidation (M))|F}TS;[MD]K{I|L}[VG]{I|L}{M(Oxidation (M))|F}TS;{[MS]|[{M(Oxidation (M))|F}A]}R{I|L}R{I|L}{M(Oxidation (M))|F}TS;{[MG]|[TS]}W{I|L}R{I|L}{M(Oxidation (M))|F}TS;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D{I|L}R{I|L}{M(Oxidation (M))|F}TS 7.2664;5.8117;4.9453;4.8327;4.6391;4.4958;3.6659;2.6727;2.5358;2.1824 +;-;-;-;-;+;-;-;-;- + 588 + 1 2.085 91338.5 1.0 4748 3549 8285 DOHH2_400M_050219_1,8299 DOHH2_400M_050219_1,8299,DMKIRLFTS True True DMKIRLFTS 46.75302 555.802966296673 658958.75 8285.0 ENST00000551200.5_1_12:102471044-102512308:-|nuORF;;ENSG00000075188|ENST00000552283|NUP37 6.622198899586995 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8300 46.767 800.0 95540.0 25 0 19428.0 -1 LRRVRRQMVP 10 115 663.8956211865635 1325.776689439927 2 663.8954955935478 MULTI CID FTMS 0 0 0 8285 107962.8828125 0.3127552930259927 -4 0.4390525817871094 15 Oxidation (M) _LRRVRRQM(Oxidation (M))VP_ ENST00000361367.6_1_11:10772580-10772718:+|nuORF 3.5964929083625545 0.7100006075494749 1 Y 1 -1 10.837 0.0 0.0 0.81744 0.0 0.0 1144.7024229377769 0.0 1144.7024229377769 0.0 6.233361666706943 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.81744 - 56 + 1 2.085 72384.1 0.6200000047683716 4749 3549 8285 DOHH2_400M_050219_1,8300 DOHH2_400M_050219_1,8300,LRRVRRQMVP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8301 46.775 480.0 186030.0 25 0 27545.0 + 18713 LAKLMSEL 8 123 452.76209994297983 903.5096469527596 2 452.7621337771416 MULTI CID FTMS 0 0 0 8285 98496.0078125 1.0 0 0.0 16 Unmodified _LAKLMSEL_ ENSG00000144354|ENST00000306721|CDCA7;ENST00000435616.5_1_2:174224078-174228757:+|nuORF;ENST00000496441.5_1_2:174219691-174228743:+|nuORF;nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1-4|CDCA7;nc|ENSG00000144354|Q9BWT1-5|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7 46.020951573049366 0.1579632664462935 1 [{I|L}A]K{I|L}MSE{I|L} 8 0 + 59.703 0.0 0.0 6.6079 6.6079 81.243 0.0 0.0 0.0 19.06540180433956 21.593793813122065 19.06540180433956 1.7609125905568137 0 1.4291746928241125 1.6989700043360187 0.3807196863200844 0.0 + + [{I|L}A]K{I|L}MSE{I|L};[{I|L}A]KM{I|L}SE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KA{I|L}SE{I|L};{[ES]|[DT]|[{I|L}C]}MRR{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}K[{I|L}A]M{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[VG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L};{[MG]|[TS]}[RV]{I|L}SE{I|L};{[MG]|[TS]}[VG][{I|L}A]M{I|L}{I|L};[VP]D[KA][YV]{I|L} 6.6079;6.413;4.4977;3.5551;3.4111;3.3762;2.3435;1.9915;1.3357;0.69958 +;-;-;-;-;-;-;-;-;- + 214 1 2.085 73585.6 1.0 4750 3549 8285 DOHH2_400M_050219_1,8301 DOHH2_400M_050219_1,8301,LAKLMSEL False True LAKLMSEL 46.775337 452.762133777142 583330.6875 8285.0 nc|ENSG00000144354|Q9BWT1-3|CDCA7;;nc|ENSG00000144354|Q9BWT1-4|CDCA7;;nc|ENSG00000144354|Q9BWT1-6|CDCA7;;ENST00000435616.5_1_2:174224078-174228757:+|nuORF;;ENST00000496441.5_1_2:174219691-174228743:+|nuORF;;nc|ENSG00000144354|Q9BWT1|CDCA7;;nc|ENSG00000144354|Q9BWT1-5|CDCA7;;ENSG00000144354|ENST00000306721|CDCA7 1.7886706590652466 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8302 46.778 58.0 748760.0 25 0 117130.0 + 41087 VNIRKEFRN 9 58 588.3350765220279 1174.6556001108556 2 588.3354980349541 MULTI CID FTMS 0 0 0 8285 687018.625 1.0 0 0.0 17 Unmodified _VNIRKEFRN_ REV__ENSG00000187801|ENST00000361584|ZFP69B;REV__nc|ENSG00000187801|Q9UJL9-2|ZFP69B 1.844237919475145 0.850302753031785 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.085 36506.0 1.0 4751 3549 8285 DOHH2_400M_050219_1,8302 DOHH2_400M_050219_1,8302,VNIRKEFRN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8303 46.782 182.0 676810.0 25 0 62841.0 + + 7018 EEMEAFPEKF 10 118 628.3836241604247 0 628.3836547732353 PEAK CID FTMS 0 0 0 8285 296535.0 0.6826557700193521 -1 0.0898895263671875 18 Unmodified _EEKVRLVARR_ nc|ENSG00000180822|Q5JS54-2|PSMG4;ENSG00000180822|ENST00000438998|PSMG4;ENST00000380305.4_1_6:3259174-3267943:+|nuORF;ENST00000473000.2_1_6:3267793-3267943:+|nuORF 3.944395688203298 0.3961065659209837 1 MEA{M(Oxidation (M))|F}PE 6 -1 24.227 0.0 0.0 1.9308 0.0 0.0 257.2934785827877 290.1516482657995 547.4451268485873 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 MEA{M(Oxidation (M))|F}PE 1.9308 - 70 + 1 2.085 97191.2 1.0 4752 3549 8285 DOHH2_400M_050219_1,8303 DOHH2_400M_050219_1,8303,EEKVRLVARR False False EEMEAFPEKF 46.781507 628.383654773235 1544765.25 8285.0 nc|ENSG00000180822|Q5JS54-2|PSMG4;;ENSG00000180822|ENST00000438998|PSMG4;;ENST00000380305.4_1_6:3259174-3267943:+|nuORF;;ENST00000473000.2_1_6:3267793-3267943:+|nuORF 8.583811283111572 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8304 46.784 138.0 736120.0 25 0 54114.0 + + 14287 DEIENVAKQF 10 126 596.8497008800862 1191.6848488269725 2 596.8503295779228 MULTI CID FTMS 0 0 0 8285 207798.5625 1.0 0 0.0 19 Unmodified _IEKHPTEIII_ ENSG00000111726|ENST00000229329|CMAS;nc|ENSG00000111726|Q8NFW8-2|CMAS 16.149105407346934 0.5765757077271437 1 ENVAKQ{M(Oxidation (M))|F} 7 -1 35.218 0.0 0.0 2.9553 0.0 0.0 357.2590808599785 0.0 357.2590808599785 0.0 23.797855321768623 0.0 0.0 0 0.0 0.0 0.0 1.586696871556164 ENVAKQ{M(Oxidation (M))|F} 2.9553 - 391 + 1 2.085 80388.4 1.0 4753 3549 8285 DOHH2_400M_050219_1,8304 DOHH2_400M_050219_1,8304,IEKHPTEIII False False DEIENVAKQF 46.784311 596.850329577923 2062186.5 8285.0 ENSG00000111726|ENST00000229329|CMAS;;nc|ENSG00000111726|Q8NFW8-2|CMAS 7.746264139811198 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8305 46.79 285.0 228630.0 25 0 25918.0 + 20306 LLEKVLDT 8 107 465.7778571188673 929.5411613045344 2 465.7776977419853 MULTI CID FTMS 0 0 0 8285 119841.9453125 0.7292021429168354 -1 0.0898895263671875 20 Unmodified _LLEKVLDT_ REV__ENSG00000121690|ENST00000241051|DEPDC7;REV__nc|ENSG00000121690|Q96QD5-2|DEPDC7 2.577480529830294 0.808687252328423 1 {I|L} 1 -1 9.9148 0.0 0.0 1.0666 0.0 0.0 798.4464327662517 0.0 798.4464327662517 0.0 6.815889512064128 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0666 + + 13 + 1 2.085 57761.3 1.0 4754 3549 8285 DOHH2_400M_050219_1,8305 DOHH2_400M_050219_1,8305,LLEKVLDT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8307 46.794 41.0 956280.0 25 0 128520.0 + 180 AANPHSFVF 9 84 495.2456669637977 988.4767809943954 2 495.2458373904228 MULTI CID FTMS 0 0 0 8306 883719.4375 0.2457151974092728 2 -0.2322807312011718 1 Unmodified _AANPHSFVF_ ENSG00000130810|ENST00000253107|PPAN;nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN 54.773552608820026 0.0299037012502309 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQS{M(Oxidation (M))|F}V{M(Oxidation (M))|F} 8 4 + 29.614 0.0 0.0 2.9959 2.9959 73.686 0.0 0.0 0.0 3.9524249272868417 5.228787452803374 3.9524249272868417 5.078474942632589 0 0.7429928190999391 0.0 0.805462187404089 0.3494850021680094 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQS{M(Oxidation (M))|F}V{M(Oxidation (M))|F};[VP]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{M(Oxidation (M))|F}V{M(Oxidation (M))|F};[HS]{M(Oxidation (M))|F}PQQV{M(Oxidation (M))|F};AAN[HT]{[ET]|[MV]}V{M(Oxidation (M))|F};AA[HT]N{[ET]|[MV]}V{M(Oxidation (M))|F};AAN[RH]{M(Oxidation (M))|F}HH;{[QG]|[NA]}WPQQV{M(Oxidation (M))|F};[HS][VG]N{[ET]|[MV]}V{M(Oxidation (M))|F};QQ[HT]{[ET]|[MV]}V{M(Oxidation (M))|F};AAGG[RH]{M(Oxidation (M))|F}HH 2.9959;2.4822;2.0778;2.0206;1.7962;1.2486;0.96294;0.56011;0.43372;0.31156 -;-;-;-;-;-;-;-;-;- 171 1 2.085 37225.1 1.0 4755 3550 8306 DOHH2_400M_050219_1,8307 DOHH2_400M_050219_1,8307,AANPHSFVF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8308 46.796 22.0 2615300.0 25 0 623710.0 30205 QVVRQPIPWV 10 66 611.3563585133002 1220.6981640934002 2 611.3564941287041 MULTI CID FTMS 0 0 0 8306 2649773.5 1.0 0 0.0 2 Unmodified _QVVRQPIPWV_ ENST00000593093.5_1_19:1271113-1271461:+|nuORF 1.4819007175156935 0.719781833666733 1 T 1 10 0.088644 0.0 0.0 0.0072617 0.0 0.0 793.4474144369534 323.1712435358032 1116.6186579727566 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.0072617 - 1 + 1 2.085 48980.3 1.0 4756 3550 8306 DOHH2_400M_050219_1,8308 DOHH2_400M_050219_1,8308,QVVRQPIPWV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8309 46.797 44.0 1192400.0 25 0 275680.0 30231 QWRRRPALR 9 55 619.8696626611791 1237.724772389158 2 619.8696777224541 MULTI CID FTMS 0 0 0 8306 1297117.625 1.0 0 0.0 3 Unmodified _QWRRRPALR_ ENST00000240139.9_1_8:22298692-22298875:+|nuORF 0.6014990680409731 0.8936861360942873 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.085 46769.8 1.0 4757 3550 8306 DOHH2_400M_050219_1,8309 DOHH2_400M_050219_1,8309,QWRRRPALR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8310 46.798 65.0 1062000.0 25 0 59096.0 + 6187 DTEFPNFKY 9 92 580.7666409114785 1159.5187288897569 2 580.7668945193291 MULTI CID FTMS 0 0 0 8306 720973.1875 0.4623132923861992 -2 0.208587646484375 4 Unmodified _DTEFPNFKY_ ENSG00000132383|ENST00000254719|RPA1 58.6788170122104 0.0268135626297836 1 {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY 9 0 + 47.406 0.0 0.0 4.0884 4.0884 81.202 0.0 0.0 0.0 29.161772202409463 12.587418566968154 12.587418566968154 9.208187539523747 0 0.6989700043360187 0.0 0.0 0.2614393726401688 + + {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PGG{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}S[RD]KY;{[ES]|[DT]|[{I|L}C]}EV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}VVC(Carbamidomethyl (C))KY;{[ES]|[DT]|[{I|L}C]}EV[QT][NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}VV[CG]KY;{[ES]|[DT]|[{I|L}C]}EV[{I|L}P]{M(Oxidation (M))|F}P{[QD]|[EN]|[WG]|[KD]|[RS]};{[ES]|[DT]|[{I|L}C]}[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}KP{[QD]|[EN]|[WG]|[KD]|[RS]};{[ES]|[DT]|[{I|L}C]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YKP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.0884;3.2943;3.167;2.7309;2.5791;2.1052;1.7849;1.6277;1.4759;1.324 +;-;-;-;-;-;-;-;-;- + 433 + 1 2.085 57534.2 1.0 4758 3550 8306 DOHH2_400M_050219_1,8310 DOHH2_400M_050219_1,8310,DTEFPNFKY True True DTEFPNFKY 46.79833 580.766894519329 63097914.0 8306.0 ENSG00000132383|ENST00000254719|RPA1 10.8778289159139 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8311 46.801 105.0 320850.0 25 0 37032.0 + 21685 LPLPIAWNQR 10 65 604.3483397824688 1206.6821266317374 2 604.3491088747978 MULTI CID FTMS 0 0 0 8306 505969.21875 0.6633957719385856 1 -0.1318283081054687 5 Unmodified _LPLPIAWNQR_ REV__nc|ENSG00000135409|Q16671-2|AMHR2 1.4819007175156935 0.719781833666733 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.085 27900.9 1.0 4759 3550 8306 DOHH2_400M_050219_1,8311 DOHH2_400M_050219_1,8311,LPLPIAWNQR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8312 46.804 146.0 498490.0 25 0 93438.0 + 19518 LFLVMKPI 8 94 480.8013679879589 959.5881830427178 2 480.8012878298759 MULTI CID FTMS 0 0 0 8306 433664.5 0.2146611005474689 2 -0.2322807312011718 6 Unmodified _LFLVMKPI_ REV__ENST00000442760.2_1_13:45914392-45914515:-|nuORF 2.889219685676258 0.8067950007271085 1 {I|L} 1 -1 11.42 0.0 0.0 1.1901 0.0 0.0 828.493439245646 0.0 828.493439245646 0.0 9.82618946870394 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1901 + + 12 + 1 2.085 61251.1 1.0 4760 3550 8306 DOHH2_400M_050219_1,8312 DOHH2_400M_050219_1,8312,LFLVMKPI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8313 46.807 171.0 605100.0 25 0 63721.0 + 2701 ATELQSMMY 9 129 537.2353155310559 1072.4560781289117 2 537.2361938357353 MULTI CID FTMS 0 0 0 8306 424314.3125 1.0 0 0.0 7 Unmodified _ATELQSMMY_ ENSG00000196284|ENST00000371459|SUPT3H 37.97399986684836 0.0865783450051559 1 [TA]E{I|L}QS 6 3 29.729 0.0 0.0 2.7721 0.0 0.0 0.0 440.132627771743 440.132627771743 7.510720296626985 0.0 0.0 0.0 0 0.0 0.958607314841775 1.1549471895720984 0.0 + [TA]E{I|L}QS 2.7721 + + 711 1 2.085 82096.9 1.0 4761 3550 8306 DOHH2_400M_050219_1,8313 DOHH2_400M_050219_1,8313,ATELQSMMY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8314 46.819 675.0 443320.0 25 0 16921.0 -1 0 161 981.8010709768414 2942.381383530724 3 982.1360961794852 MULTI CID FTMS 0 0 0 8306 371245.625 1.0 0 0.0 8 1 C(Carbamidomethyl (C))SQP[YG]P{[CA]|SS}QDAN{I|L}NP{I|L}N 18 -1 79.712 0.0 0.0 2.7091 0.0 0.0 981.5122547834 0.0 981.5122547834 0.0 28.75991337420736 0.0 0.0 0 1.110924374808178 0.0 0.4247425010840047 2.25 C(Carbamidomethyl (C))SQP[YG]P{[CA]|SS}QDAN{I|L}NP{I|L}N 2.7091 - 26595 1 2.085 198705.1 1.0 4762 3550 8306 DOHH2_400M_050219_1,8314 DOHH2_400M_050219_1,8314, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8315 46.822 164.0 673740.0 25 0 65687.0 + 8516 ETEEGIYWRY 10 97 673.3066974650047 1344.5988419968094 2 673.3067504763603 MULTI CID FTMS 0 0 0 8306 362359.3125 1.0 0 0.0 9 Unmodified _ETEEGIYWRY_ ENSG00000131650|ENST00000303746|KREMEN2;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;nc|ENSG00000131650|Q8NCW0-3|KREMEN2;nc|ENSG00000131650|Q8NCW0-4|KREMEN2;nc|ENSG00000131650|Q8NCW0-5|KREMEN2;nc|ENSG00000131650|Q8NCW0-6|KREMEN2 79.59630418116434 0.0173986606250113 1 ETEEG{I|L}YWRY 10 0 + 97.723 0.0 0.0 7.2678 7.2678 92.942 0.0 0.0 0.0 26.07963467823149 12.09544243948811 12.09544243948811 10.7795501485935 0 0.6382104921644451 1.3010299956639813 0.4247425010840047 0.9749073637206092 + + ETEEG{I|L}YWRY;ETEW{I|L}YWRY;ETEEG{I|L}YY[WR];ETEEG{I|L}Y[RH][DP];ETEEG{I|L}Y{I|L}[QT]Y;ETEW{I|L}Y[RH][DP];ETEEY{[VA]|[{I|L}G]}WRY;ETEW{I|L}YY[WR];[DP][TP]{I|L}Y{I|L}GEE[DP];ETEEY{[VA]|[{I|L}G]}[RH][DP] 7.2678;6.4661;6.3683;6.2372;6.2314;5.7482;5.7423;5.5666;5.3282;4.9389 +;-;-;-;-;-;-;-;-;- + 893 + 1 2.085 83118.9 1.0 4763 3550 8306 DOHH2_400M_050219_1,8315 DOHH2_400M_050219_1,8315,ETEEGIYWRY True True ETEEGIYWRY 46.821838 673.30675047636 2566559.75 8306.0 ENSG00000131650|ENST00000303746|KREMEN2;;nc|ENSG00000131650|Q8NCW0-5|KREMEN2;;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;;nc|ENSG00000131650|Q8NCW0-4|KREMEN2;;nc|ENSG00000131650|Q8NCW0-6|KREMEN2;;nc|ENSG00000131650|Q8NCW0-3|KREMEN2 11.300531387329102 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8316 46.825 130.0 637660.0 25 0 47088.0 + 4749 DEIENVAKQF 10 108 596.7959011493625 1191.577249365525 2 596.7963744997978 MULTI CID FTMS 0 0 0 8306 323186.125 1.0 0 0.0 10 Unmodified _DEIENVAKQF_ ENSG00000111726|ENST00000229329|CMAS;nc|ENSG00000111726|Q8NFW8-2|CMAS 51.629811660486645 0.0705852162080619 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E{[NV]|[RG]}AKQ{M(Oxidation (M))|F} 10 0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L} + + 35.341 8.072 2.2601 2.9659 2.9659 50.375 0.0 0.0 0.0 0.0 24.081575598659303 0.0 0.0 0 0.7302046884880937 0.0 0.0 1.0114393726401687 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E{[NV]|[RG]}AKQ{M(Oxidation (M))|F} 2.9659 + + 336 + 1 2.085 66428.6 1.0 4764 3550 8306 DOHH2_400M_050219_1,8316 DOHH2_400M_050219_1,8316,DEIENVAKQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8317 46.832 405.0 204710.0 25 0 78016.0 + 7779 ELGRKRIRHR 10 77 660.9086215314882 1319.8026901297762 2 660.9091674685478 MULTI CID FTMS 0 0 0 8306 271696.78125 1.0 0 0.0 11 Unmodified _ELGRKRIRHR_ REV__ENSG00000163083|ENST00000295228|INHBB 3.5964929083625545 0.7100006075494749 1 Y 1 -1 12.764 0.0 0.0 0.96713 0.0 0.0 1138.728103193056 0.0 1138.728103193056 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.96713 - 19 + 1 2.085 71224.9 1.0 4765 3550 8306 DOHH2_400M_050219_1,8317 DOHH2_400M_050219_1,8317,ELGRKRIRHR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8318 46.839 396.0 361000.0 25 0 25589.0 + 45426 YTDHLQSYVIY 11 119 701.3387454377842 1400.6629379423682 2 701.3386718630791 MULTI CID FTMS 0 0 0 8306 242672.640625 1.0 0 0.0 12 Unmodified _YTDHLQSYVIY_ ENSG00000090989|ENST00000381295|EXOC1;ENST00000511971.5_1_4:56749994-56766742:+|nuORF;nc|ENSG00000090989|Q9NV70-2|EXOC1 51.41523569358685 0.1097924807909074 1 GC{I|L}QSYV{I|L}Y 9 4 83.167 0.0 0.0 5.9377 0.0 0.0 356.1696261532776 0.0 356.1696261532776 0.0 58.10734692507396 0.0 0.0 0 0.75 0.0 1.2302046884880935 0.0 GC{I|L}QSYV{I|L}Y 5.9377 - 4924 1 2.085 112344.2 1.0 4766 3550 8306 DOHH2_400M_050219_1,8318 DOHH2_400M_050219_1,8318,YTDHLQSYVIY True True YTDHLQSYVIY 46.838867 701.338671863079 1991102.0 8306.0 nc|ENSG00000090989|Q9NV70-2|EXOC1;;ENST00000511971.5_1_4:56749994-56766742:+|nuORF;;ENSG00000090989|ENST00000381295|EXOC1 7.998766581217448 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8319 46.853 800.0 396610.0 25 0 48661.0 10268 FQVLPIIVFFS 11 161 655.3822190894778 1308.7498852457554 2 655.3823730349541 MULTI CID FTMS 0 0 0 8306 197030.0 0.2721625695831945 -3 0.3089103698730469 13 Unmodified _FQVLPIIVFFS_ ENSG00000156222|ENST00000394573|SLC28A1 8.745405648335112 0.8338865417133445 1 {[QG]|[NA]}A{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 6 9 37.505 0.0 0.0 2.8657 0.0 0.0 0.0 668.4400457284304 668.4400457284304 14.21778096973062 0.0 0.0 0.0 0 0.0 0.2006594505464183 0.3054621874040891 1.0303695511246984 {[QG]|[NA]}A{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 2.8657 - 665 1 2.085 258964.7 0.7799999713897705 4767 3550 8306 DOHH2_400M_050219_1,8319 DOHH2_400M_050219_1,8319,FQVLPIIVFFS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8320 46.863 601.0 283730.0 25 0 18446.0 23824 LVFILYPEAI 10 161 393.2343514606849 1176.681224982255 3 393.2339660525322 MULTI CID FTMS 0 0 0 8306 190057.703125 1.0 0 0.0 14 Unmodified _LVFILYPEAI_ ENSG00000103546|ENST00000568943|SLC6A2;nc|ENSG00000103546|P23975-2|SLC6A2;nc|ENSG00000103546|P23975-3|SLC6A2 13.614867670302877 0.6190977555336379 1 A{I|L} 2 8 19.821 0.0 0.0 1.6845 0.0 0.0 974.548639388308 0.0 974.548639388308 0.0 6.30787072657742 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + A{I|L} 1.6845 + + 125 + 1 2.085 134050.1 1.0 4768 3550 8306 DOHH2_400M_050219_1,8320 DOHH2_400M_050219_1,8320,LVFILYPEAI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8321 46.878 800.0 87120.0 25 0 10588.0 -1 0 92 1117.9985049978363 2233.982457062473 2 1118.000537097454 MULTI CID FTMS 0 0 0 8306 158205.40625 1.0 0 0.0 15 1 [HA]QDEAQQNA{M(Oxidation (M))|F}YQVNNE[QT] 19 -1 + 96.78 0.0 0.0 4.3322 4.3322 54.246 0.0 0.0 0.0 0.6507297828679555 0.0 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 [HA]QDEAQQNA{M(Oxidation (M))|F}YQVNNE[QT];[HA]QDEAQQNA{M(Oxidation (M))|F}YKVNNE[DN];[QT]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQNA{M(Oxidation (M))|F}YQVNNE[KT];[QT]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQNA{M(Oxidation (M))|F}YKVNNE[KT];[HA]QDAEQQNA{M(Oxidation (M))|F}YKVNNE[DN];[HA]QDAEQQNA{M(Oxidation (M))|F}YQVNNE[QT];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[YN]QQNA{M(Oxidation (M))|F}YQVNNE[DN];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[YN]QQNA{M(Oxidation (M))|F}YKVNNE[DN];[YQ]V[CS]AQQNA{M(Oxidation (M))|F}YQVNNE[QT];[YQ]V[CS]AQQNA{M(Oxidation (M))|F}YKVNNE[KT] 4.3322;4.3322;4.3031;4.3031;4.1186;4.1186;4.0336;4.0336;3.9405;3.9405 -;-;-;-;-;-;-;-;-;- 12067 1 2.085 51997.3 0.7799999713897705 4769 3550 8306 DOHH2_400M_050219_1,8321 DOHH2_400M_050219_1,8321, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8322 46.882 189.0 299990.0 25 0 17264.0 + 25388 NCPERIITL 9 100 529.7868088811077 1057.5590648290154 2 529.7868530154228 MULTI CID FTMS 0 0 0 8306 195730.34375 1.0 0 0.0 16 Unmodified _NCPERIITL_ ENSG00000169564|ENST00000303577|PCBP1;ENSG00000197111|ENST00000546463|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 36.506200033944 0.094635877243972 1 {[C(Carbamidomethyl (C))G]|[NC]}PE 4 5 26.273 0.0 0.0 2.4843 0.0 0.0 0.0 611.3888643854124 611.3888643854124 6.28022170376731 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 + {[C(Carbamidomethyl (C))G]|[NC]}PE 2.4843 + + 100 + 1 2.085 46476.9 1.0 4770 3550 8306 DOHH2_400M_050219_1,8322 DOHH2_400M_050219_1,8322,NCPERIITL True True NCPERIITL 46.8819 529.786853015423 1202079.625 8306.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000197111|Q15366-7|PCBP2;;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 6.65812349319458 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8323 46.886 205.0 353700.0 25 0 38260.0 44279 YLLNHRLQIL 10 92 641.8826648067551 1281.75077668031 2 641.8822509646416 MULTI CID FTMS 0 0 0 -1 0 17 Unmodified _YLLNHRLQIL_ ENSG00000147324|ENST00000276282|MFHAS1 3.944395688203298 0.708391353636983 1 [Y{I|L}]DS 4 8 27.396 0.0 0.0 2.1374 0.0 0.0 0.0 800.5228768602507 800.5228768602507 13.583493856482248 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 [Y{I|L}]DS 2.1374 - 123 1 2.085 58711.4 1.0 4771 3550 8306 DOHH2_400M_050219_1,8323 DOHH2_400M_050219_1,8323,YLLNHRLQIL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8324 46.9 800.0 104780.0 25 0 24715.0 -1 IVSRMVFYFHY 11 104 739.3688530332612 0 739.3682128787041 PEAK CID FTMS 0 0 0 8306 151237.0625 1.0 0 0.0 18 Oxidation (M) _IVSRM(Oxidation (M))VFYFHY_ nc|ENSG00000226807|Q6ZUA9|MROH5 3.5964929083625545 0.4761840153648598 1 YV{I|L}V 4 -1 16.731 0.0 0.0 1.133 0.0 0.0 756.3759374124223 243.04485498599848 999.4207923984208 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YV{I|L}V 1.133 - 170 + 1 2.085 63285.1 0.7300000190734863 4772 3550 8306 DOHH2_400M_050219_1,8324 DOHH2_400M_050219_1,8324,IVSRMVFYFHY False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8325 46.908 372.0 282890.0 25 0 20837.0 + 32308 RYGPQFTL 8 117 491.2614893486379 980.5084257640758 2 491.2616149783134 MULTI CID FTMS 0 0 0 8306 132234.265625 0.5837555787227778 -1 0.1186981201171875 19 Unmodified _RYGPQFTL_ ENSG00000081853|ENST00000394576|PCDHGA2;ENSG00000204956|ENST00000517417|PCDHGA1;ENSG00000240184|ENST00000308177|PCDHGC3;ENSG00000240764|ENST00000252087|PCDHGC5;ENSG00000242419|ENST00000306593|PCDHGC4;ENSG00000253159|ENST00000252085|PCDHGA12;ENSG00000253305|ENST00000520790|PCDHGB6;ENSG00000253485|ENST00000518069|PCDHGA5;ENSG00000253537|ENST00000518325|PCDHGA7;ENSG00000253731|ENST00000517434|PCDHGA6;ENSG00000253767|ENST00000398604|PCDHGA8;ENSG00000253846|ENST00000398610|PCDHGA10;ENSG00000253873|ENST00000398587|PCDHGA11;ENSG00000253910|ENST00000522605|PCDHGB2;ENSG00000253953|ENST00000519479|PCDHGB4;ENSG00000254122|ENST00000398594|PCDHGB7;ENSG00000254221|ENST00000523390|PCDHGB1;ENSG00000254245|ENST00000253812|PCDHGA3;ENSG00000261934|ENST00000573521|PCDHGA9;ENSG00000262209|ENST00000576222|PCDHGB3;ENSG00000262576|ENST00000571252|PCDHGA4;ENSG00000276547|ENST00000617380|PCDHGB5;nc|ENSG00000253873|Q9Y5H2-3|PCDHGA11 48.345845343767074 0.1470278396477103 1 [YR]GPQ{M(Oxidation (M))|F}T{I|L} 8 0 + 54.998 0.0 0.0 5.6091 5.6091 84.632 0.0 0.0 0.0 5.484550065040281 37.37334396171555 5.484550065040281 8.170693164140133 0 0.8807196863200843 0.0 0.3807196863200844 0.4247425010840047 + + [YR]GPQ{M(Oxidation (M))|F}T{I|L};[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Q{M(Oxidation (M))|F}T{I|L};[YR]GP[AG]{M(Oxidation (M))|F}T{I|L};[{I|L}T][Y{I|L}]EET{I|L};[{I|L}T][Y{I|L}]ETE{I|L};[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[AG]{M(Oxidation (M))|F}T{I|L};[{M(Oxidation (M))|F}T]{[QD]|[EN]|[WG]|[KD]|[RS]}KTE{I|L};[YR][TA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L};[{M(Oxidation (M))|F}T][C(Carbamidomethyl (C))N]{I|L}{I|L}T{I|L};{[ET]|[MV]}[YE]{I|L}{I|L}T{I|L} 5.6091;4.7758;4.6645;4.0414;3.8385;3.8312;3.0911;2.829;2.522;1.3513 +;-;-;-;-;-;-;-;-;- + 731 1 2.085 85390.9 1.0 4773 3550 8306 DOHH2_400M_050219_1,8325 DOHH2_400M_050219_1,8325,RYGPQFTL False True RYGPQFTL 46.907538 491.261614978313 1269121.25 8306.0 ENSG00000253485|ENST00000518069|PCDHGA5;;ENSG00000253767|ENST00000398604|PCDHGA8;;ENSG00000081853|ENST00000394576|PCDHGA2;;ENSG00000253305|ENST00000520790|PCDHGB6;;ENSG00000253731|ENST00000517434|PCDHGA6;;ENSG00000253873|ENST00000398587|PCDHGA11;;ENSG00000253846|ENST00000398610|PCDHGA10;;ENSG00000262209|ENST00000576222|PCDHGB3;;ENSG00000253910|ENST00000522605|PCDHGB2;;ENSG00000276547|ENST00000617380|PCDHGB5;;ENSG00000253953|ENST00000519479|PCDHGB4;;nc|ENSG00000253873|Q9Y5H2-3|PCDHGA11;;ENSG00000240764|ENST00000252087|PCDHGC5;;ENSG00000240184|ENST00000308177|PCDHGC3;;ENSG00000204956|ENST00000517417|PCDHGA1;;ENSG00000262576|ENST00000571252|PCDHGA4;;ENSG00000261934|ENST00000573521|PCDHGA9;;ENSG00000254245|ENST00000253812|PCDHGA3;;ENSG00000254221|ENST00000523390|PCDHGB1;;ENSG00000253159|ENST00000252085|PCDHGA12;;ENSG00000253537|ENST00000518325|PCDHGA7;;ENSG00000242419|ENST00000306593|PCDHGC4;;ENSG00000254122|ENST00000398594|PCDHGB7 5.515435059865316 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8326 46.921 800.0 84994.0 25 0 9921.2 -1 0 105 745.3349221025383 2232.9829369078147 3 745.6708251833916 MULTI CID FTMS 0 0 0 8306 113566.1171875 1.0 0 0.0 20 1 [QT]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQNA{M(Oxidation (M))|F} 10 -1 37.413 0.0 0.0 1.6755 0.0 0.0 0.0 990.4327754466932 990.4327754466932 17.742275032520137 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.8494850021680094 [QT]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQNA{M(Oxidation (M))|F} 1.6755 - 1841 1 2.085 55843.6 0.550000011920929 4774 3550 8306 DOHH2_400M_050219_1,8326 DOHH2_400M_050219_1,8326, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8328 46.929 212.0 318930.0 25 0 18729.0 + 736 AEQDLIREL 9 111 543.7922555549061 1085.569958176612 2 543.7933227419853 MULTI CID FTMS 0 0 0 8327 48597.65625 0.0946775696425402 2 -0.2543678283691406 1 Unmodified _AEQDLIREL_ ENSG00000125124|ENST00000245157|BBS2;ENST00000561853.1_1_16:56536201-56536626:-|nuORF;ENST00000561951.5_1_16:56535647-56545169:-|nuORF;ENST00000565781.5_1_16:56536201-56536402:-|nuORF 17.44264345198275 0.3645313841742926 1 {[CP]|[EA]}QD{I|L}{I|L} 6 3 26.828 0.0 0.0 2.4713 0.0 0.0 0.0 413.2154940240844 413.2154940240844 -4.01818526217312 0.0 -4.01818526217312 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {[CP]|[EA]}QD{I|L}{I|L} 2.4713 + + 237 + 1 2.089 55387.0 1.0 4775 3551 8327 DOHH2_400M_050219_1,8328 DOHH2_400M_050219_1,8328,AEQDLIREL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8329 46.943 800.0 118890.0 25 0 7767.8 + 31638 RRFTEIYEF 9 119 420.8840312715759 1259.6302644149278 3 420.8837463259697 MULTI CID FTMS 0 0 0 8327 48380.97265625 0.0151194969090891 4 -0.5170021057128906 2 Unmodified _RRFTEIYEF_ chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1;nc|ENSG00000165178|A8MVU1|NCF1C;nc|ENSG00000290838|A6NI72|NCF1B 17.11289562659939 0.3734572693229295 1 Q[R{I|L}]{I|L}YE{M(Oxidation (M))|F} 7 4 34.073 0.0 0.0 2.705 0.0 0.0 292.10774428535314 0.0 292.10774428535314 0.0 17.874788488859817 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.7614393726401688 Q[R{I|L}]{I|L}YE{M(Oxidation (M))|F} 2.705 - 168 1 2.089 82452.5 0.449999988079071 4776 3551 8327 DOHH2_400M_050219_1,8329 DOHH2_400M_050219_1,8329,RRFTEIYEF False True RRFTEIYEF 46.943085 420.88374632597 68323158.0 8327.0 chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;;ENSG00000158517|ENST00000289473|NCF1;;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;;chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;;nc|ENSG00000158517|P14598-2|NCF1;;nc|ENSG00000290838|A6NI72|NCF1B;;nc|ENSG00000165178|A8MVU1|NCF1C 6.28098996480306 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8330 46.945 96.0 1105300.0 25 0 96268.0 + 732 AEQDFISKF 9 109 542.7685273194684 1083.5225017057369 2 542.7694579958916 MULTI CID FTMS 0 0 0 8327 518574.1875 0.1560989888731039 -1 0.1318283081054687 3 Unmodified _AEQDFISKF_ ENSG00000090989|ENST00000381295|EXOC1;ENST00000504321.1_1_4:56755058-56759725:+|nuORF;ENST00000511971.5_1_4:56749994-56766742:+|nuORF;nc|ENSG00000090989|Q9NV70-2|EXOC1 55.23464941255904 0.0288927259679799 1 {[CP]|[EA]}QD{M(Oxidation (M))|F}{I|L}SK{M(Oxidation (M))|F} 9 0 + 73.043 0.0 0.0 6.7412 6.7412 90.228 0.0 0.0 0.0 42.4674454697869 12.587418566968154 12.587418566968154 9.208187539523747 0 1.610924374808178 0.0 0.7614393726401688 0.4247425010840047 + + {[CP]|[EA]}QD{M(Oxidation (M))|F}{I|L}SK{M(Oxidation (M))|F};{[CP]|[EA]}[AG]D{M(Oxidation (M))|F}{I|L}SK{M(Oxidation (M))|F};{[CP]|[EA]}QD{M(Oxidation (M))|F}{I|L}[KA]Y;{[CP]|[EA]}[AG]D{M(Oxidation (M))|F}{I|L}[KA]Y;{[MS]|[{M(Oxidation (M))|F}A]}WW{I|L}SK{M(Oxidation (M))|F};{[CP]|[EA]}QRRDY{M(Oxidation (M))|F};{[CP]|[EA]}QRRD{M(Oxidation (M))|F}Y;{[CP]|[EA]}[AG]RRDY{M(Oxidation (M))|F};{[CP]|[EA]}QD[RH]{I|L}{[ES]|[DT]|[{I|L}C]};{[CP]|[EA]}Q[{I|L}T][{M(Oxidation (M))|F}T]K{M(Oxidation (M))|F} 6.7412;5.8914;4.6541;3.8043;3.1828;3.0573;2.6642;2.2025;2.0018;1.9299 +;-;-;-;-;-;-;-;-;- + 583 + 1 2.089 85079.6 1.0 4777 3551 8327 DOHH2_400M_050219_1,8330 DOHH2_400M_050219_1,8330,AEQDFISKF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8331 46.947 107.0 1096800.0 25 0 104420.0 + 33020 SEPDFVAKF 9 103 520.2584745906022 1038.5023962480043 2 520.2587768435478 MULTI CID FTMS 0 0 0 8327 510066.03125 0.1453699242628116 -2 0.2505264282226562 4 Unmodified _SEPDFVAKF_ ENSG00000179933|ENST00000319074|C14orf119 27.628801355627647 0.1796483985696185 1 {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F} 9 0 + 50.628 0.0 0.0 4.8751 4.8751 87.416 0.0 0.0 0.0 2.54554718523508 13.46787486224656 2.54554718523508 20.071297076834608 0 0.4247425010840047 0.0 0.0 0.3807196863200844 + + {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[DP]VAK{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}PCC{I|L}{I|L}K{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}PD[RH]{I|L}W;{[ES]|[DT]|[{I|L}C]}P[VP]AQT[NP];{[ES]|[DT]|[{I|L}C]}P[VP]PD{I|L}W;{[ES]|[DT]|[{I|L}C]}P[RH]D{I|L}W;{[ES]|[DT]|[{I|L}C]}P[VP]V[EP]W;{[ES]|[DT]|[{I|L}C]}P[VP]V[NS][NP];{[ES]|[DT]|[{I|L}C]}[RH]PD{I|L}W 4.8751;2.9424;2.2539;2.0372;1.8283;1.5451;1.2879;1.1619;0.98452;0.92128 +;-;-;-;-;-;-;-;-;- + 480 + 1 2.089 97062.1 1.0 4778 3551 8327 DOHH2_400M_050219_1,8331 DOHH2_400M_050219_1,8331,SEPDFVAKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8332 46.949 85.0 756230.0 25 0 60434.0 + 549 AEIEIVKEEF 10 94 603.8164463440879 1205.6183397549758 2 603.8164550662041 MULTI CID FTMS 0 0 0 8327 384799.0 0.3158611249914068 -1 0.1318283081054687 5 Unmodified _AEIEIVKEEF_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2 35.61225514009592 0.2039006631696762 1 {[QN]|[E{I|L}]|[KN]}ATHV{I|L}E{I|L} 9 7 63.471 0.0 0.0 5.2646 0.0 0.0 0.0 197.052946038432 197.052946038432 18.086433282917422 0.0 0.0 0.0 0 1.0 1.3010299956639813 0.6382104921644451 0.0 {[QN]|[E{I|L}]|[KN]}ATHV{I|L}E{I|L} 5.2646 - 1133 1 2.089 53546.9 1.0 4779 3551 8327 DOHH2_400M_050219_1,8332 DOHH2_400M_050219_1,8332,AEIEIVKEEF False True AEIEIVKEEF 46.949389 603.816455066204 6377891.5 8327.0 ENST00000557005.1_1_14:64469755-64489638:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 7.90838607152303 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8333 46.952 124.0 555850.0 25 0 83012.0 + 32955 SELPGNPNAVW 11 106 592.2903359342446 1182.566118935289 2 592.2905151247978 MULTI CID FTMS 0 0 0 8327 364258.125 0.65711955340319 -1 0.1318283081054687 6 Unmodified _SELPGNPNAVW_ ENSG00000189091|ENST00000302516|SF3B3 47.594388314883695 0.1309523012099263 1 [NP]GPNAV{[ET]|[MV]}VW 11 7 + 49.121 0.0 0.0 4.1538 4.1538 76.775 0.0 0.0 0.0 3.1420954521829003 34.05973989648441 3.1420954521829003 4.973246408079497 0 0.5356668758921829 0.0 0.0 1.579689690656103 [NP]GPNAV{[ET]|[MV]}VW;[PG]NPNAV{[ET]|[MV]}VW;[PG]GGPNAV{[ET]|[MV]}VW;[R{M(Oxidation (M))|F}]{[ET]|[MV]}VA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W;{[MG]|[TS]}[YQ]AV{[ET]|[MV]}VW;{[CT]|[{M(Oxidation (M))|F}G]}V{[ET]|[MV]}VA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W;[NP]GPGGAV{[ET]|[MV]}VW;[NP]GPNA{I|L}{[ES]|[DT]|[{I|L}C]}VW;[PG]NPGGAV{[ET]|[MV]}VW;[NP]GPN{I|L}G{[ET]|[MV]}VW 4.1538;3.7333;3.5777;3.5325;3.5238;3.4905;3.3819;3.3492;2.9613;2.949 -;-;-;-;-;-;-;-;-;- 1090 1 2.089 56454.7 1.0 4780 3551 8327 DOHH2_400M_050219_1,8333 DOHH2_400M_050219_1,8333,SELPGNPNAVW False True SELPGNPNAVW 46.951952 592.290515124798 3951151.25 8327.0 ENSG00000189091|ENST00000302516|SF3B3 6.389423529307048 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8334 46.955 135.0 590840.0 25 0 32760.0 + 19573 ARSDKPIFTL 10 101 574.3296124682229 1146.6446720032457 2 574.3272582888603 MULTI CID FTMS 0 0 0 8327 305940.3125 1.0 0 0.0 7 Unmodified _LFTHLGVFTL_ ENSG00000136045|ENST00000412830|PWP1 26.268140514670165 0.3785003716575977 1 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 7 41.427 0.0 0.0 3.6129 0.0 0.0 0.0 736.4121947768489 736.4121947768489 14.739152941678311 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3.6129 - 185 + 1 2.089 65616.6 1.0 4781 3551 8327 DOHH2_400M_050219_1,8334 DOHH2_400M_050219_1,8334,LFTHLGVFTL False True ARSDKPIFTL 46.9547 574.32725828886 2289051.5 8327.0 ENSG00000136045|ENST00000412830|PWP1 5.091726938883464 2.0 False 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8335 46.962 409.0 394510.0 25 0 39503.0 + 5176 DILSRIHTI 9 138 534.313534401025 1066.61251586885 2 534.3138305544853 MULTI CID FTMS 0 0 0 8327 225447.53125 1.0 0 0.0 8 Unmodified _DILSRIHTI_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 117.7605887643192 0.0024069341015653 1 {I|L}D{I|L}R{I|L}SHT{I|L} 9 4 + 103.73 0.0 0.0 9.7248 9.7248 89.392 0.0 0.0 0.0 65.94115881320863 21.637894163010102 21.637894163010102 4.832881222565248 0 2.1549471895720984 2.0 2.177825934852436 0.0 {I|L}D{I|L}R{I|L}SHT{I|L};{I|L}D{I|L}{I|L}RSHT{I|L};{I|L}D{I|L}RVTHT{I|L};{I|L}D{I|L}SR{I|L}HT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}SR{I|L}HT{I|L};{I|L}D{I|L}T[RV]HT{I|L};{I|L}DR{I|L}{I|L}SHT{I|L};{I|L}DR{I|L}VTHT{I|L};{I|L}{I|L}DSR{I|L}HT{I|L};{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}R{I|L}HT{I|L} 9.7248;9.2717;9.2147;8.7951;8.4264;8.1665;8.0734;7.5633;6.4358;5.0217 -;-;-;-;+;-;-;-;-;- + 1967 + 1 2.089 127873.4 1.0 4782 3551 8327 DOHH2_400M_050219_1,8335 DOHH2_400M_050219_1,8335,DILSRIHTI True True DILSRIHTI 46.962008 534.313830554485 1153636.0 8327.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 4.555273532867432 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8336 46.976 800.0 228530.0 25 0 10282.0 + -1 VTDDSWLGNTTQY 13 181 750.336322842722 1498.658092752244 2 750.3370239138603 MULTI CID FTMS 0 0 0 8327 161850.921875 0.4978072557262598 -1 0.1318283081054687 9 2 Carbamidomethyl (C),Oxidation (M) _EVC(Carbamidomethyl (C))HLWM(Oxidation (M))VLC(Carbamidomethyl (C))H_ nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1 13.042465956692816 0.7638483625850725 1 {[TV]|[{I|L}S]}WDDS{I|L}GN 9 -1 68.727 0.0 0.0 4.5859 0.0 0.0 0.0 508.2076892700752 508.2076892700752 32.70056145346415 0.0 0.0 0.0 0 0.9163865622122672 1.3979400086720375 1.905855760735872 0.3494850021680094 {[TV]|[{I|L}S]}WDDS{I|L}GN 4.5859 - 13168 1 2.089 130661.5 0.7599999904632568 4783 3551 8327 DOHH2_400M_050219_1,8336 DOHH2_400M_050219_1,8336,EVCHLWMVLCH False False VTDDSWLGNTTQY 46.975856 750.33702391386 1216822.125 8327.0 nc|ENSG00000131196|O95644-10|NFATC1;;nc|ENSG00000131196|O95644-5|NFATC1;;ENSG00000131196|ENST00000427363|NFATC1;;nc|ENSG00000131196|O95644-11|NFATC1;;nc|ENSG00000131196|O95644-8|NFATC1;;nc|ENSG00000131196|O95644-2|NFATC1;;nc|ENSG00000131196|O95644-6|NFATC1;;nc|ENSG00000131196|O95644-4|NFATC1;;nc|ENSG00000131196|O95644-3|NFATC1;;chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1 8.22526741027832 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8337 46.984 456.0 412890.0 25 0 58125.0 + 32236 RWLQLSVMV 9 131 566.3219624811511 1130.629372029102 2 566.3221923708916 MULTI CID FTMS 0 0 0 8327 150517.09375 0.3100274442253743 -2 0.2505264282226562 10 Unmodified _RWLQLSVMV_ REV__ENST00000580504.5_1_17:12920195-12920919:-|nuORF 4.3292370932331545 0.7635526921153418 1 Y 1 -1 11.783 0.0 0.0 1.0421 0.0 0.0 949.5551970796864 0.0 949.5551970796864 0.0 3.719685749262709 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0421 - 29 + 1 2.089 141986.5 1.0 4784 3551 8327 DOHH2_400M_050219_1,8337 DOHH2_400M_050219_1,8337,RWLQLSVMV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8338 46.99 346.0 225460.0 25 0 40025.0 + -1 IMKQIMITF 9 78 570.8115030157219 1139.6084530982437 2 570.8115722537041 MULTI CID FTMS 0 0 0 8327 144386.34375 1.0 0 0.0 11 Oxidation (M) _IM(Oxidation (M))KQIMITF_ REV__ENSG00000127412|ENST00000265310|TRPV5;REV__ENSG00000165125|ENST00000359396|TRPV6;REV__nc|ENSG00000165125|Q9H1D0-2|TRPV6 26.88365393820708 0.1891292719743517 1 {I|L}T{M(Oxidation (M))|F} 3 -1 34.922 0.0 0.0 3.0643 0.0 0.0 760.3983056591627 0.0 760.3983056591627 0.0 10.219114953917376 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 {I|L}T{M(Oxidation (M))|F} 3.0643 + + 123 1 2.089 66401.8 1.0 4785 3551 8327 DOHH2_400M_050219_1,8338 DOHH2_400M_050219_1,8338,IMKQIMITF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8339 46.997 322.0 527790.0 25 0 32736.0 + 338 AEANHFIDL 9 166 515.2538847507747 1028.4932165683492 2 515.2540161013603 MULTI CID FTMS 0 0 0 8327 139198.578125 0.3468376552868483 -1 0.1318283081054687 12 Unmodified _AEANHFIDL_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 49.55428908609986 0.0413471690215031 1 [HN]A{M(Oxidation (M))|F}{I|L}DEA{I|L} 9 6 + 63.424 0.0 0.0 6.1667 6.1667 80.209 0.0 0.0 0.0 5.593859345357188 16.478174818886373 5.593859345357188 1.7889231653887023 0 0.3252574989159953 0.0 0.5891368308784531 1.4436726795685342 [HN]A{M(Oxidation (M))|F}{I|L}DEA{I|L};[HN]A{M(Oxidation (M))|F}EA{I|L}D{I|L};[HN]A{M(Oxidation (M))|F}{I|L}EAD{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}NA{I|L}DEA{I|L};[HN]{M(Oxidation (M))|F}A{I|L}DEA{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}NAEA{I|L}D{I|L};[HN]{M(Oxidation (M))|F}AEA{I|L}D{I|L};[HN]A{M(Oxidation (M))|F}{I|L}EDA{I|L};{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}D{I|L};[HN]A{M(Oxidation (M))|F}EVEA{I|L} 6.1667;5.9927;5.6349;5.6228;5.577;5.4488;5.403;5.3906;5.3885;5.3865 -;-;-;-;-;-;-;-;-;- 2467 1 2.089 129087.0 1.0 4786 3551 8327 DOHH2_400M_050219_1,8339 DOHH2_400M_050219_1,8339,AEANHFIDL True True AEANHFIDL 46.997262 515.2547 2184141.5 8327.0 nc|ENSG00000147162|O15294-3|OGT;;ENSG00000147162|ENST00000373719|OGT;;nc|ENSG00000147162|O15294-4|OGT;;nc|ENSG00000147162|O15294-2|OGT 5.948290506998698 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8340 47.001 206.0 468780.0 25 0 73712.0 + 177 AANKTIIYL 9 106 503.8001903894328 1005.5858278456656 2 503.8005248904228 MULTI CID FTMS 0 0 0 8327 100874.53125 0.1752727355260047 -2 0.2505264282226562 13 Unmodified _AANKTIIYL_ ENSG00000112159|ENST00000369393|MDN1 61.357469665136826 0.0253304979873734 1 {[QN]|[E{I|L}]|[KN]}AAT{I|L}{I|L}Y{I|L} 9 4 + 56.338 0.0 0.0 5.6025 5.6025 80.053 0.0 0.0 0.0 3.167542135966798 9.889917747712644 3.167542135966798 3.167542135966798 0 0.7742275032520141 1.5228787452803376 1.1989700043360187 0.6694451763165201 {[QN]|[E{I|L}]|[KN]}AAT{I|L}{I|L}Y{I|L};AANKT{I|L}{I|L}Y{I|L};QQKT{I|L}{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}AA{I|L}T{I|L}Y{I|L};AAGGKT{I|L}{I|L}Y{I|L};AANK{I|L}T{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}AAT{I|L}Y{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[RV]T{I|L}Y{I|L};[{I|L}T][RD]{I|L}{I|L}Y{I|L};AANKT{I|L}Y{I|L}{I|L} 5.6025;5.2875;4.4892;4.4811;4.3718;4.1661;4.0049;3.8369;3.714;3.6899 -;+;-;-;-;-;-;-;-;- + 269 1 2.089 78514.0 1.0 4787 3551 8327 DOHH2_400M_050219_1,8340 DOHH2_400M_050219_1,8340,AANKTIIYL True True AANKTIIYL 47.001183 503.800524890423 4208045.0 8327.0 ENSG00000112159|ENST00000369393|MDN1 4.55621862411499 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8341 47.005 214.0 308440.0 25 0 28227.0 + 19240 LEIEAENHYW 10 85 652.3015920344195 1302.588631135639 2 652.3027221560478 MULTI CID FTMS 0 0 0 8327 99033.0234375 0.5561108228827522 -1 0.1318283081054687 14 Unmodified _LEIEAENHYW_ ENSG00000173141|ENST00000309594|MRPL57 31.26834338654808 0.266153677697784 1 {[QN]|[E{I|L}]|[KN]}AE[DP]SADDV 11 8 50.214 0.0 0.0 3.8549 0.0 0.0 0.0 158.08164806362643 158.08164806362643 33.66728397355015 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.3807196863200844 0.0 {[QN]|[E{I|L}]|[KN]}AE[DP]SADDV 3.8549 - 1188 1 2.089 54804.5 1.0 4788 3551 8327 DOHH2_400M_050219_1,8341 DOHH2_400M_050219_1,8341,LEIEAENHYW False True LEIEAENHYW 47.005252 652.302722156048 1104245.75 8327.0 ENSG00000173141|ENST00000309594|MRPL57 6.062037944793701 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8342 47.019 800.0 215920.0 25 0 13461.0 + -1 MEAMIHRL 8 188 508.75308795092747 0 508.7530700564384 PEAK CID FTMS 0 0 0 8327 111499.359375 1.0 0 0.0 15 Oxidation (M) _MEAM(Oxidation (M))IHRL_ REV__ENSG00000153404|ENST00000637938|PLEKHG4B;REV__ENST00000504041.1_1_5:169407-179718:+|nuORF 44.40701690623563 0.1214779822192256 1 EAPG{I|L}[KG]E 8 -1 38.471 0.0 0.0 3.7884 0.0 0.0 131.03979298994244 100.02320276431874 231.0629957542612 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 0.3807196863200844 0.9916440611282626 EAPG{I|L}[KG]E 3.7884 - 411 + 1 2.089 133831.1 0.4799999892711639 4789 3551 8327 DOHH2_400M_050219_1,8342 DOHH2_400M_050219_1,8342,MEAMIHRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8343 47.022 135.0 663530.0 25 0 46411.0 + 7165 EEPISLHTW 9 97 556.2748875256971 1110.535222118194 2 556.2751342654228 MULTI CID FTMS 0 0 0 8327 89886.8125 0.1348912190884821 -2 0.2505264282226562 16 Unmodified _EEPISLHTW_ ENST00000318410.11_1_8:126096196-126103965:-|nuORF 85.35673624503755 0.0162188719545379 1 EEP{I|L}S{I|L}HTW 9 0 + 79.267 0.0 0.0 7.1377 7.1377 94.334 0.0 0.0 0.0 31.484484532805155 11.706962271689749 11.706962271689749 18.390625187447966 0 0.3252574989159953 1.5228787452803376 2.048455006504028 0.0 + + EEP{I|L}S{I|L}HTW;EE[{I|L}A]{I|L}S{I|L}P[HC];EEP{I|L}[{M(Oxidation (M))|F}T]GRY;[{I|L}P]N[KC]S{I|L}P[HC];[{I|L}P]S{I|L}H[HA]P[HC];[{I|L}P]GG[KC]S{I|L}P[HC];[{I|L}P]S{I|L}HTWEE;[AG][WQ]{I|L}S{I|L}P[HC];[HT]VG[{M(Oxidation (M))|F}T]{I|L}P[HC];[{I|L}P]NNW{I|L}PEE 7.1377;5.4817;4.8947;4.5824;4.3008;3.7572;3.6018;3.5947;3.3838;3.1581 +;-;-;-;-;-;-;-;-;- + 739 + 1 2.089 75360.9 1.0 4790 3551 8327 DOHH2_400M_050219_1,8343 DOHH2_400M_050219_1,8343,EEPISLHTW True True EEPISLHTW 47.021822 556.275134265423 4753443.0 8327.0 ENST00000318410.11_1_8:126096196-126103965:-|nuORF 6.871744791666667 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8345 47.029 245.0 465290.0 25 0 146120.0 + 2617 ASSGSPLY 8 108 391.18874237958096 780.3629318259619 2 391.1883727908134 MULTI CID FTMS 0 0 0 8344 138149.75 0.0701092448899675 2 -0.2704963684082031 1 Unmodified _ASSGSPLY_ REV__ENSG00000130479|ENST00000324096|MAP1S;REV__ENST00000601097.1_1_19:17843916-17845234:+|nuORF;REV__nc|ENSG00000130479|Q66K74-2|MAP1S 6.354104778181461 0.7857632046190106 1 {[{M(Oxidation (M))|F}H]|[RQ]}A{I|L}MY 6 -1 + 42.338 0.0 0.0 5.4254 5.4254 83.998 0.0 0.0 0.0 23.95242492728684 26.194028404633155 23.95242492728684 8.45098040014257 0 0.218765315847925 1.3979400086720375 0.0 0.3494850021680094 {[{M(Oxidation (M))|F}H]|[RQ]}A{I|L}MY;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}AMY;[H{I|L}]{M(Oxidation (M))|F}AMY;[WY]H{I|L}Y;[WY]HY{I|L} 5.4254;4.3425;1.7175;0.95433;0.18282 -;-;-;-;- 45 1 2.089 93827.0 1.0 4791 3552 8344 DOHH2_400M_050219_1,8345 DOHH2_400M_050219_1,8345,ASSGSPLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8346 47.032 167.0 316550.0 25 0 48361.0 + 26004 NLVNFRREK 9 87 588.3350765220279 1174.6556001108556 2 588.3354980349541 MULTI CID FTMS 0 0 0 8344 224800.421875 0.3272115393887611 3 -0.4165496826171875 2 Unmodified _NLVNFRREK_ REV__ENSG00000164512|ENST00000341048|ANKRD55;REV__nc|ENSG00000164512|Q3KP44-2|ANKRD55;REV__nc|ENSG00000164512|Q3KP44-3|ANKRD55 3.5964929083625545 0.7891324200061827 1 {I|L} 1 -1 8.5387 0.0 0.0 0.72691 0.0 0.0 1043.5603069973774 0.0 1043.5603069973774 0.0 8.450075808415463 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.72691 + + 9 + 1 2.089 45416.0 1.0 4792 3552 8344 DOHH2_400M_050219_1,8346 DOHH2_400M_050219_1,8346,NLVNFRREK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8347 47.037 233.0 388800.0 25 0 18257.0 -1 0 110 881.413472732213 1760.812392531226 2 881.9156982302666 MULTI CID FTMS 0 0 0 8344 442638.4375 0.5387404794279574 -1 0.1004524230957031 3 1 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YE 13 -1 81.411 0.0 0.0 4.6235 0.0 0.0 0.0 226.1389055529634 226.1389055529634 55.74965266766869 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 2.173877368056628 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YE 4.6235 - 9012 1 2.089 67207.1 1.0 4793 3552 8344 DOHH2_400M_050219_1,8347 DOHH2_400M_050219_1,8347, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8348 47.04 192.0 256620.0 25 0 65406.0 + 19281 LEKQVILQPMK 11 72 663.8956211865635 1325.776689439927 2 663.8956786990166 MULTI CID FTMS 0 0 0 8344 298476.75 0.8646507112061649 -1 0.1004524230957031 4 Unmodified _LEKQVILQPMK_ REV__ENSG00000099715|ENST00000698851|PCDH11Y;REV__ENSG00000102290|ENST00000682573|PCDH11X;REV__ENST00000361724.3_1_X:91090458-91134302:+|nuORF;REV__nc|ENSG00000099715|Q9BZA8-2|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8-4|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8|PCDH11Y;REV__nc|ENSG00000102290|Q9BZA7-2|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-3|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-4|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-6|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-8|PCDH11X 2.735195868890462 0.8622431031272658 1 K 1 -1 2.4743 0.0 0.0 0.18663 0.0 0.0 867.5029295295739 327.1451815240844 1194.6481110536583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.18663 + + 16 + 1 2.089 50824.5 1.0 4794 3552 8344 DOHH2_400M_050219_1,8348 DOHH2_400M_050219_1,8348,LEKQVILQPMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8349 47.045 266.0 234850.0 25 0 18276.0 + 8400 ESELFKKIAV 10 108 582.3354233305109 1162.6562937278218 2 582.3352538943291 MULTI CID FTMS 0 0 0 8344 291408.15625 0.6698016049849865 -1 0.1004524230957031 5 Unmodified _ESELFKKIAV_ REV__ENSG00000100490|ENST00000395834|CDKL1;REV__nc|ENSG00000100490|Q00532-2|CDKL1;REV__nc|ENSG00000100490|Q00532-3|CDKL1 10.823927491677226 0.6659270209832991 1 Y 1 -1 11.259 0.0 0.0 0.96839 0.0 0.0 981.581569462 0.0 981.581569462 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.96839 - 47 + 1 2.089 51426.3 1.0 4795 3552 8344 DOHH2_400M_050219_1,8349 DOHH2_400M_050219_1,8349,ESELFKKIAV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8350 47.049 175.0 428260.0 25 0 71260.0 + 45284 YSDLHAFYY 9 106 589.761156303802 1177.5077596744038 2 589.7615844607353 MULTI CID FTMS 0 0 0 8344 254981.46875 1.0 0 0.0 6 Unmodified _YSDLHAFYY_ ENSG00000185090|ENST00000373045|MANEAL;nc|ENSG00000185090|Q5VSG8-3|MANEAL 39.957323273325 0.0756908302845263 1 [H{I|L}]DASY{M(Oxidation (M))|F}YY 9 5 + 53.427 0.0 0.0 4.5373 4.5373 72.982 0.0 0.0 0.0 1.638568026386693 6.170912423450403 1.638568026386693 0.9691001300805624 0 0.8807196863200843 0.0 0.3807196863200844 0.0 [H{I|L}]DASY{M(Oxidation (M))|F}YY;[H{I|L}]ADSY{M(Oxidation (M))|F}YY;[HA]{I|L}DSY{M(Oxidation (M))|F}YY;[H{I|L}]DSYA{M(Oxidation (M))|F}YY;[H{I|L}]DSAY{M(Oxidation (M))|F}YY;[H{I|L}]DAS{M(Oxidation (M))|F}YYY;[H{I|L}]ADS{M(Oxidation (M))|F}YYY;[HA]{I|L}DS{M(Oxidation (M))|F}YYY;[H{I|L}]DSA{M(Oxidation (M))|F}YYY;[H{I|L}]DA{M(Oxidation (M))|F}YSYY 4.5373;4.455;4.3981;4.3877;4.3877;4.2816;4.1993;4.1425;4.1321;4.026 -;-;-;-;-;-;-;-;-;- 661 1 2.089 61609.5 1.0 4796 3552 8344 DOHH2_400M_050219_1,8350 DOHH2_400M_050219_1,8350,YSDLHAFYY True True YSDLHAFYY 47.048649 589.761584460735 1428222.0 8344.0 ENSG00000185090|ENST00000373045|MANEAL;;nc|ENSG00000185090|Q5VSG8-3|MANEAL 8.274608453114828 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8351 47.055 342.0 225350.0 25 0 40066.0 33691 SIYRLKKTWA 10 96 633.3693617495003 1264.7241705658005 2 633.3693115115166 MULTI CID FTMS 0 0 0 8344 216219.375 0.0959018176689253 -4 0.4408683776855469 7 Unmodified _SIYRLKKTWA_ ENSG00000143344|ENST00000360851|RGL1;nc|ENSG00000143344|Q9NZL6-2|RGL1 2.735195868890462 0.713984610296514 1 {M(Oxidation (M))|F}{I|L}D 3 9 12.307 0.0 0.0 0.97311 0.0 0.0 215.19896145180684 671.3293551080686 886.5283165598755 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}D 0.97311 - 23 + 1 2.089 64799.4 1.0 4797 3552 8344 DOHH2_400M_050219_1,8351 DOHH2_400M_050219_1,8351,SIYRLKKTWA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8352 47.059 211.0 251240.0 25 0 44728.0 12001 GPKKTKRE 8 84 472.288164993872 942.561777054544 2 472.2886535525322 MULTI CID FTMS 0 0 0 8344 201274.265625 0.0590813367166346 4 -0.53009033203125 8 Unmodified _GPKKTKRE_ ENSG00000154767|ENST00000285021|XPC;nc|ENSG00000154767|Q01831-2|XPC 0.6903765706972694 0.8201419426409876 1 {I|L} 1 8 9.3971 0.0 0.0 0.99698 0.0 0.0 811.4667891168473 0.0 811.4667891168473 0.0 8.68379282612709 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.99698 - 7 + 1 2.089 44936.2 1.0 4798 3552 8344 DOHH2_400M_050219_1,8352 DOHH2_400M_050219_1,8352,GPKKTKRE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8353 47.062 187.0 420890.0 25 0 40712.0 + 14759 ILDEVIMGY 9 110 534.76749908165 1067.5204452301 2 534.7679931521416 MULTI CID FTMS 0 0 0 8344 193548.28125 0.5014408374952445 -1 0.1004524230957031 9 Oxidation (M) _ILDEVIM(Oxidation (M))GY_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 44.40701690623563 0.0526327925666318 1 {I|L}{I|L}DD{I|L}R{I|L} 7 5 49.926 0.0 0.0 4.6768 0.0 0.0 0.0 225.9954679605968 225.9954679605968 21.73393743112328 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 {I|L}{I|L}DD{I|L}R{I|L} 4.6768 - 689 1 2.089 65594.2 1.0 4799 3552 8344 DOHH2_400M_050219_1,8353 DOHH2_400M_050219_1,8353,ILDEVIMGY True False ILDEVIMGY 47.062464 534.767993152142 2445642.25 8344.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 6.003732045491536 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8354 47.07 416.0 283140.0 25 0 12196.0 + 32789 SEELRNLGW 9 147 552.2773649937492 1102.5401770542985 2 552.2778808474541 MULTI CID FTMS 0 0 0 8344 178627.0 1.0 0 0.0 10 Unmodified _SEELRNLGW_ ENSG00000181555|ENST00000409792|SETD2;nc|ENSG00000181555|Q9BYW2-2|SETD2;nc|ENSG00000181555|Q9BYW2-3|SETD2 63.960520009940105 0.0238892913700936 1 {[ES]|[DT]|[{I|L}C]}E{I|L}RN{I|L}GW 9 0 + 52.802 0.0 0.0 4.7891 4.7891 79.262 0.0 0.0 0.0 4.137342758552691 39.01654413832347 4.137342758552691 5.295700576058536 0 2.242992819099939 0.0 0.6549471895720985 0.0 + + {[ES]|[DT]|[{I|L}C]}E{I|L}RN{I|L}GW;{[ES]|[DT]|[{I|L}C]}E{I|L}RVQGW;EES{I|L}RN{I|L}GW;{[ES]|[DT]|[{I|L}C]}E{I|L}RGG{I|L}GW;EES{I|L}RVQGW;{[ES]|[DT]|[{I|L}C]}E{I|L}RV[AG]GW;EES{I|L}RGG{I|L}GW;{[QD]|[EN]|[WG]|[KD]|[RS]}[W{I|L}]W{I|L}GW;EES{I|L}RV[AG]GW;{[MG]|[TS]}[TP][WR]{I|L}GW 4.7891;4.3088;4.059;3.9539;3.5787;3.4736;3.2239;3.0781;2.7435;2.7233 +;-;-;-;-;-;-;-;-;- + 507 1 2.089 92976.9 1.0 4800 3552 8344 DOHH2_400M_050219_1,8354 DOHH2_400M_050219_1,8354,SEELRNLGW True True SEELRNLGW 47.069893 552.277880847454 577458.1875 8344.0 nc|ENSG00000181555|Q9BYW2-2|SETD2;;ENSG00000181555|ENST00000409792|SETD2;;nc|ENSG00000181555|Q9BYW2-3|SETD2 7.443213780721028 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8355 47.078 456.0 252020.0 25 0 26533.0 + 9385 FIRVVGSEF 9 122 527.2896401341388 1052.5647273350776 2 527.2902709841728 MULTI CID FTMS 0 0 0 8344 156568.46875 1.0 0 0.0 11 Unmodified _FIRVVGSEF_ ENSG00000013275|ENST00000157812|PSMC4;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;ENST00000596386.1_1_19:40477100-40485896:+|nuORF;ENST00000601697.5_1_19:40477100-40486546:+|nuORF;nc|ENSG00000013275|P43686-2|PSMC4 56.17704186161178 0.0281986971544335 1 RVVGSE{M(Oxidation (M))|F} 7 2 65.61 0.0 0.0 6.2333 0.0 0.0 260.1534596173844 0.0 260.1534596173844 0.0 49.66776068493495 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.6237125054200234 + RVVGSE{M(Oxidation (M))|F} 6.2333 + + 320 1 2.089 91094.0 1.0 4801 3552 8344 DOHH2_400M_050219_1,8355 DOHH2_400M_050219_1,8355,FIRVVGSEF True True FIRVVGSEF 47.078001 527.290270984173 957238.75 8344.0 ENSG00000013275|ENST00000157812|PSMC4;;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;;ENST00000596386.1_1_19:40477100-40485896:+|nuORF;;nc|ENSG00000013275|P43686-2|PSMC4;;ENST00000601697.5_1_19:40477100-40486546:+|nuORF 6.910825411478679 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8356 47.082 187.0 324540.0 25 0 24783.0 -1 MAGARRLELGE 11 92 630.822318711543 1259.6300844898858 2 630.8196288943291 MULTI CID FTMS 0 0 0 8344 158096.984375 0.0195198415535225 5 -0.6950111389160156 12 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))AGARRLELGE_ ENSG00000198585|ENST00000521288|NUDT16;nc|ENSG00000198585|Q96DE0-4|NUDT16 12.240655878213236 0.7805268987462184 1 {M(Oxidation (M))|F} 1 -1 14.843 0.0 0.0 1.1784 0.0 0.0 1094.5510877631264 0.0 1094.5510877631264 0.0 0.8639569627157151 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1784 + + 77 + 1 2.089 48543.6 1.0 4802 3552 8344 DOHH2_400M_050219_1,8356 DOHH2_400M_050219_1,8356,MAGARRLELGE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8357 47.09 414.0 121090.0 25 0 18437.0 + 18927 LCRLWKKGRAL 11 99 672.4091526454617 1342.8037523577234 2 672.4087402224541 MULTI CID FTMS 0 0 0 8344 146797.09375 1.0 0 0.0 13 Unmodified _LCRLWKKGRAL_ REV__ENST00000370355.2_1_10:102121227-102121431:+|nuORF 1.3295316138638542 0.8688751186870782 1 EEG{I|L}Y[WR]Y 8 -1 25.832 0.0 0.0 1.9237 0.0 0.0 228.2974790196359 0.0 228.2974790196359 0.0 16.227504859500446 0.0 0.0 0 0.0 0.0 0.0 0.0 EEG{I|L}Y[WR]Y 1.9237 - 77 + 1 2.089 47135.4 1.0 4803 3552 8344 DOHH2_400M_050219_1,8357 DOHH2_400M_050219_1,8357,LCRLWKKGRAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8358 47.104 800.0 227070.0 25 0 23046.0 16189 IVGPDGLVY 9 170 466.757977373688 931.501401814176 2 466.7583801150322 MULTI CID FTMS 0 0 0 8344 140807.984375 0.7875221967435455 -1 0.1004524230957031 14 Unmodified _IVGPDGLVY_ ENSG00000105202|ENST00000221801|FBL 56.541270873467816 0.0279970378729908 1 [DP]G{I|L}GV{I|L}VY 9 5 + 47.098 0.0 0.0 5.0562 5.0562 75.152 0.0 0.0 0.0 9.756406541405546 9.57757090619188 9.57757090619188 1.249387366082999 0 0.8182503180159344 0.6575773191777937 0.9698565171985376 0.0 [DP]G{I|L}GV{I|L}VY;[DP]GVAV{I|L}VY;[DP]GG{I|L}V{I|L}VY;[DP]G{I|L}R{I|L}VY;[DP]G{I|L}G{I|L}VVY;[DP]G{I|L}VG{I|L}VY;[DP]GVA{I|L}VVY;[DP]GV{I|L}G{I|L}VY;[PG]D{I|L}GV{I|L}VY;[DP]N{I|L}V{I|L}VY 5.0562;4.922;4.6611;4.4266;4.2818;4.2725;4.1477;4.1383;4.0088;3.9657 -;-;-;-;-;-;-;-;-;- 956 1 2.089 142754.9 0.5600000023841858 4804 3552 8344 DOHH2_400M_050219_1,8358 DOHH2_400M_050219_1,8358,IVGPDGLVY True True DPGVLGIVY 47.104026 466.758380115032 809939.5625 8344.0 ENSG00000143224|ENST00000367999|PPOX;;ENST00000466452.1_1_1:161140171-161140447:+|nuORF;;ENST00000495483.5_2_1:161137139-161146869:+|nuORF 0.6087329685688019 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8359 47.118 800.0 288730.0 25 0 25491.0 + 44167 YLDSIPPGQYM 11 162 642.3029342470242 1282.5913155608482 2 642.3026611208916 MULTI CID FTMS 0 0 0 8344 123523.0078125 0.9647692926613514 8 -1.0829505920410156 15 Unmodified _YLDSIPPGQYM_ ENSG00000170312|ENST00000395284|CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF;nc|ENSG00000170312|P06493-2|CDK1 36.12702656103203 0.2720571796884491 1 [Y{I|L}]D{[WN]|[YH]}[C(Carbamidomethyl (C))N]{I|L}[VS] 10 8 + 34.168 0.0 0.0 2.664 2.664 80.168 0.0 0.0 0.0 16.949237304209888 3.193540224208107 3.193540224208107 15.013487579716768 0 0.0 2.0 0.0 0.3252574989159953 [Y{I|L}]D{[WN]|[YH]}[C(Carbamidomethyl (C))N]{I|L}[VS];[Y{I|L}][HT]C(Carbamidomethyl (C))[YQ]{I|L}[VS];{NN|[MP]|[D{I|L}]|[EV]}Y{[WN]|[YH]}[C(Carbamidomethyl (C))N]{I|L}[VS];[YE]V{[WN]|[YH]}[C(Carbamidomethyl (C))N]{I|L}[VS];{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{[DA]|[EG]}M[C(Carbamidomethyl (C))N]{I|L}[VS];{[QN]|[E{I|L}]|[KN]}K[CS]M[C(Carbamidomethyl (C))N]{I|L}[VS];[{M(Oxidation (M))|F}V]K{[DA]|[EG]}M[C(Carbamidomethyl (C))N]{I|L}[VS] 2.664;1.4934;0.84385;0.73262;0.099168;0.042765;0.02361 -;-;-;-;-;-;- 580 1 2.089 168598.7 0.6499999761581421 4805 3552 8344 DOHH2_400M_050219_1,8359 DOHH2_400M_050219_1,8359,YLDSIPPGQYM False True YLDSIPPGQYM 47.117864 642.302661120892 5013738.375 8344.0 ENST00000475504.6_1_10:62539923-62545554:+|nuORF;;nc|ENSG00000170312|P06493-2|CDK1;;ENSG00000170312|ENST00000395284|CDK1 7.096913496653239 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8360 47.121 175.0 530580.0 25 0 87771.0 + 32819 SEFSIPQHL 9 111 529.2682480864337 1056.5219432396673 2 529.2694579958916 MULTI CID FTMS 0 0 0 8344 109807.8515625 1.0 0 0.0 16 Unmodified _SEFSIPQHL_ ENSG00000149418|ENST00000278742|ST14 16.942295170755138 0.3780752226737986 1 [{I|L}T][WR]RM 6 8 33.094 0.0 0.0 3.1324 0.0 0.0 0.0 210.04633884284308 210.04633884284308 11.974987195809426 0.0 0.0 0.0 0 0.0 2.0 0.5356668758921829 0.7614393726401688 [{I|L}T][WR]RM 3.1324 - 822 1 2.089 75329.5 1.0 4806 3552 8344 DOHH2_400M_050219_1,8360 DOHH2_400M_050219_1,8360,SEFSIPQHL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8361 47.133 614.0 170310.0 25 0 9571.6 + 29141 QEVGYSIRF 9 129 549.7844599250478 1097.5543669168956 2 549.7826415896416 MULTI CID FTMS 0 0 0 8344 103623.7890625 1.0 0 0.0 17 Unmodified _QEVGYSIRF_ ENSG00000109606|ENST00000336812|DHX15 71.70789743142352 0.0204387454931768 1 QEVGYS{I|L}R{M(Oxidation (M))|F} 9 0 + 80.533 0.0 0.0 7.3375 7.3375 92.687 0.0 0.0 0.0 59.33515707827347 18.389852215477525 18.389852215477525 9.365429718850734 0 1.3478684916057015 1.2218487496163564 0.0 0.3054621874040891 + + QEVGYS{I|L}R{M(Oxidation (M))|F};QERYS{I|L}R{M(Oxidation (M))|F};QEVGY[R{I|L}]S{M(Oxidation (M))|F};QEV{M(Oxidation (M))|F}VVGSS{M(Oxidation (M))|F};QE{M(Oxidation (M))|F}[TA]S{I|L}R{M(Oxidation (M))|F};QEV{M(Oxidation (M))|F}[RV]SS{M(Oxidation (M))|F};QEVGY[R{I|L}]AY;QERY[R{I|L}]S{M(Oxidation (M))|F};QE{M(Oxidation (M))|F}VVVGSS{M(Oxidation (M))|F};QEVGY[YQ]V{I|L} 7.3375;6.4842;5.7088;5.534;5.2056;4.9388;4.9297;4.8555;4.8362;4.7918 +;-;-;-;-;-;-;-;-;- + 727 + 1 2.089 84880.8 1.0 4807 3552 8344 DOHH2_400M_050219_1,8361 DOHH2_400M_050219_1,8361,QEVGYSIRF True True QEVGYSIRF 47.133168 549.782641589642 674038.75 8344.0 ENSG00000109606|ENST00000336812|DHX15 7.639646689097087 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8362 47.147 800.0 164670.0 25 0 20477.0 + 26767 PEAFPALA 8 102 815.430302629624 814.4230261630239 1 815.4307128787041 MULTI CID FTMS 0 0 0 8344 168065.671875 1.0 0 0.0 18 Unmodified _PAEPAFLA_ nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1;nc|ENSG00000142864|Q8NC51-4|SERBP1;ENSG00000142864|ENST00000361219|SERBP1 46.92087301778293 0.1537303740847981 1 [EP]AP{M(Oxidation (M))|F}A{I|L}A 8 4 + 70.23 0.0 0.0 8.6233 8.6233 85.241 0.0 0.0 0.0 2.1300477605831816 15.432233212450768 2.1300477605831816 2.1300477605831816 0 1.458170666312956 1.3010299956639813 0.3252574989159953 0.0 [EP]AP{M(Oxidation (M))|F}A{I|L}A;[PA]{M(Oxidation (M))|F}EPA{I|L}A;[EP]{M(Oxidation (M))|F}APA{I|L}A;[PA]EP{M(Oxidation (M))|F}A{I|L}A;[EP]APA{M(Oxidation (M))|F}{I|L}A;[PA]{M(Oxidation (M))|F}EAP{I|L}A;[EP]{M(Oxidation (M))|F}AAP{I|L}A;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AEPA{I|L}A;[PA]EPA{M(Oxidation (M))|F}{I|L}A;[VS]{I|L}A{M(Oxidation (M))|F}AHA 8.6233;8.3617;8.3098;8.0893;7.8992;7.8921;7.8402;7.3815;7.3652;7.3554 -;-;-;-;-;-;-;-;+;- + 850 1 2.089 96078.9 0.7099999785423279 4808 3552 8344 DOHH2_400M_050219_1,8362 DOHH2_400M_050219_1,8362,PAEPAFLA False True PEAFPALA 47.147018 815.430712878704 1364375.5 8344.0 nc|ENSG00000142864|Q8NC51-2|SERBP1;;nc|ENSG00000142864|Q8NC51|SERBP1;;nc|ENSG00000142864|Q8NC51-4|SERBP1;;ENSG00000142864|ENST00000361219|SERBP1 5.646649519602458 1.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8363 47.161 800.0 58601.0 25 0 2307.8 + + 8423 ASEDSVLLY 9 85 996.4887315447828 995.4814550781828 1 996.4882690310478 MULTI CID FTMS 0 0 0 8344 105201.5 0.1425911436846205 2 -0.2704963684082031 19 Unmodified _ESIDGSLLY_ ENST00000481458.1_1_21:37771819-37785123:+|nuORF;ENSG00000159259|ENST00000314103|CHAF1B 21.74664581756881 0.2544899275067181 1 {[ES]|[DT]|[{I|L}C]}WW{I|L}{I|L}Y 7 -1 + 32.452 0.0 0.0 3.2599 3.2599 71.487 0.0 0.0 0.0 8.550981955100383 21.4828069691076 8.550981955100383 2.8523572848074927 0 0.0 0.0 1.424742501084005 0.0 {[ES]|[DT]|[{I|L}C]}WW{I|L}{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[CP]|[EA]}[TA]{I|L}{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[DA]|[EG]}[VS]{I|L}{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[CP]|[EA]}V[VS]{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[DA]|[EG]}{I|L}[VS]{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[CP]|[EA]}V{I|L}[VS]Y;{[ES]|[DT]|[{I|L}C]}{[DA]|[EG]}PA[KA][HA];{[ES]|[DT]|[{I|L}C]}{[DA]|[EG]}{I|L}{I|L}[VS]Y 3.2599;2.9734;2.671;2.0714;1.769;1.0129;0.82274;0.71047 -;-;-;-;-;-;-;- 128 1 2.089 36382.0 0.5600000023841858 4809 3552 8344 DOHH2_400M_050219_1,8363 DOHH2_400M_050219_1,8363,ESIDGSLLY False False ASEDSVLLY 47.160865 996.488269031048 4569525.0 8344.0 ENST00000481458.1_1_21:37771819-37785123:+|nuORF;;ENSG00000159259|ENST00000314103|CHAF1B 4.261635224024455 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8364 47.176 800.0 33061.0 25 0 2584.3 -1 0 56 976.1379272341728 0 976.1379272341728 PEAK CID FTMS 0 0 0 -1 0 20 1 MS{I|L} 3 -1 9.2082 0.0 0.0 0.47215 0.0 0.0 974.8059925525268 641.2540377252561 1616.060030277783 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MS{I|L} 0.47215 - 32 + 1 2.089 28301.1 0.550000011920929 4810 3552 8344 DOHH2_400M_050219_1,8364 DOHH2_400M_050219_1,8364, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8366 47.181 53.0 1004700.0 25 0 204520.0 21012 LNVRKAAHEAL 11 62 611.3563585133002 1220.6981640934002 2 611.3563720583916 MULTI CID FTMS 0 0 0 8365 1005201.625 0.3793537919373109 3 -0.3761749267578125 1 Unmodified _LNVRKAAHEAL_ ENSG00000196497|ENST00000354464|IPO4;ENST00000558780.5_2_14:24651254-24657791:-|nuORF;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000560935.1_1_14:24652387-24652645:-|nuORF;ENST00000561379.1_1_14:24651787-24652670:-|nuORF;nc|ENSG00000196497|Q8TEX9-2|IPO4 1.1933415558491238 0.8695176722560516 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.076 43916.6 1.0 4811 3553 8365 DOHH2_400M_050219_1,8366 DOHH2_400M_050219_1,8366,LNVRKAAHEAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8367 47.182 43.0 1452700.0 25 0 91574.0 + 6188 DTEFPNFKY 9 81 580.7666409114785 1159.5187288897569 2 580.7669555544853 MULTI CID FTMS 0 0 0 8365 1263511.25 0.8102077248947653 1 -0.1165809631347656 2 Unmodified _DTEFPNFKY_ ENSG00000132383|ENST00000254719|RPA1 58.6788170122104 0.0268135626297836 1 {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY 9 0 + 43.598 0.0 0.0 3.76 3.76 80.197 0.0 0.0 0.0 29.16131990654592 10.221157291141836 10.221157291141836 9.208187539523747 0 0.6989700043360187 0.0 0.4247425010840047 0.0 + + {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PGG{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}VVC(Carbamidomethyl (C))KY;{[ES]|[DT]|[{I|L}C]}EVVC(Carbamidomethyl (C)){M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}EVV{M(Oxidation (M))|F}C(Carbamidomethyl (C))KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}VV[CG]KY;{[ES]|[DT]|[{I|L}C]}[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[NP]{M(Oxidation (M))|F}K{M(Oxidation (M))|F}[YE]{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}EVV[CG]{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}EVV{M(Oxidation (M))|F}[CG]KY 3.76;2.9659;2.7305;2.2112;2.1276;1.9363;1.6716;1.4307;1.4171;1.3335 +;-;-;-;-;-;-;-;-;- + 348 + 1 2.076 52386.4 1.0 4812 3553 8365 DOHH2_400M_050219_1,8367 DOHH2_400M_050219_1,8367,DTEFPNFKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8368 47.183 35.0 1985800.0 25 0 446860.0 + 37245 TIMPKDIQL 9 77 529.7992042128877 1057.5838554925754 2 529.7997924685478 MULTI CID FTMS 0 0 0 8365 1518824.25 0.3986418754819147 -1 0.1539154052734375 3 Unmodified _TIMPKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 60.07390631473393 0.0260411565414776 1 [{I|L}T][YV]Q{I|L}D 7 6 51.783 0.0 0.0 4.8963 0.0 0.0 0.0 222.1253603570922 222.1253603570922 29.827344480616915 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.6989700043360187 0.805462187404089 [{I|L}T][YV]Q{I|L}D 4.8963 - 463 + 1 2.076 56515.2 1.0 4813 3553 8365 DOHH2_400M_050219_1,8368 DOHH2_400M_050219_1,8368,TIMPKDIQL True True TIMPKDIQL 47.183394 529.799792468548 38671752.0 8365.0 ENSG00000278828|ENST00000685041|H3C10;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000197409|ENST00000356476|H3C4;;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000188375|ENST00000340398|H3-5;;ENSG00000277775|ENST00000618052|H3C7;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;;ENSG00000275379|ENST00000616365|H3C11;;ENSG00000163041|ENST00000366815|H3-3A 3.908899943033854 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8369 47.185 58.0 820850.0 25 0 92824.0 + 43258 WEQGFSQSF 9 80 558.2431417032667 1114.4717304733333 2 558.2433959841728 MULTI CID FTMS 0 0 0 8365 871079.875 1.0 0 0.0 4 Unmodified _WEQGFSQSF_ ENSG00000168036|ENST00000349496|CTNNB1 36.12702656103203 0.0967173616627612 1 [WE]QG{M(Oxidation (M))|F} 5 4 44.693 0.0 0.0 4.0102 0.0 0.0 0.0 464.1785535536646 464.1785535536646 19.916440611282624 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.8494850021680094 + [WE]QG{M(Oxidation (M))|F} 4.0102 + + 267 1 2.076 43314.4 1.0 4814 3553 8365 DOHH2_400M_050219_1,8369 DOHH2_400M_050219_1,8369,WEQGFSQSF True True WEQGFSQSF 47.184853 558.243395984173 4991253.5 8365.0 ENSG00000168036|ENST00000349496|CTNNB1 7.176760355631511 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8370 47.186 68.0 558140.0 25 0 127600.0 40832 VLNFFLLSFPI 11 58 655.3822190894778 1308.7498852457554 2 655.3824951052666 MULTI CID FTMS 0 0 0 8365 723942.3125 1.0 0 0.0 5 Unmodified _VLNFFLLSFPI_ ENST00000591445.1_1_17:67501802-67515615:+|nuORF 1.1933415558491238 0.8695176722560516 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.076 41419.9 1.0 4815 3553 8365 DOHH2_400M_050219_1,8370 DOHH2_400M_050219_1,8370,VLNFFLLSFPI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8371 47.188 69.0 785220.0 25 0 100240.0 + 2553 ASETGFLTY 9 83 494.7347039627077 987.4548549922156 2 494.7348815798759 MULTI CID FTMS 0 0 0 8365 697923.9375 0.4524918493559838 -1 0.1539154052734375 6 Unmodified _ASETGFLTY_ ENSG00000227057|ENST00000374617|WDR46;ENST00000489905.1_1_6:33248421-33255161:-|nuORF 23.1484247019978 0.2366544122328345 1 TY 2 7 24.464 0.0 0.0 2.4775 0.0 0.0 705.3326167838264 0.0 705.3326167838264 0.0 -2.319393642848482 -2.319393642848482 0.0 0 0.0 0.0 0.3494850021680094 0.0 + TY 2.4775 + + 157 + 1 2.076 45575.4 1.0 4816 3553 8365 DOHH2_400M_050219_1,8371 DOHH2_400M_050219_1,8371,ASETGFLTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8372 47.19 79.0 681390.0 25 0 43920.0 + 18052 KTDHFIFTY 9 94 586.2928737694581 1170.571194605716 2 586.2930786013603 MULTI CID FTMS 0 0 0 8365 579817.5625 1.0 0 0.0 7 Unmodified _KTDHFIFTY_ ENSG00000116212|ENST00000371370|LRRC42 45.69961567697781 0.0497987121815769 1 [HD]TK{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}TY 9 4 + 68.778 0.0 0.0 5.8756 5.8756 79.699 0.0 0.0 0.0 2.147642715192504 49.02372200412145 2.147642715192504 2.272437815030628 0 1.0 0.0 0.805462187404089 0.6109243748081782 [HD]TK{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}TY;[YE][HA]K{I|L}{M(Oxidation (M))|F}TY;[HD]T{M(Oxidation (M))|F}K{I|L}{M(Oxidation (M))|F}TY;{[{M(Oxidation (M))|F}H]|[RQ]}DTK{I|L}{M(Oxidation (M))|F}TY;[HD]TK{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TY;[HD]{M(Oxidation (M))|F}TK{I|L}{M(Oxidation (M))|F}TY;[YE][HA]K{M(Oxidation (M))|F}{I|L}TY;[{M(Oxidation (M))|F}T][HD]K{I|L}{M(Oxidation (M))|F}TY;[HD]TK{M(Oxidation (M))|F}{I|L}T{M(Oxidation (M))|F}Y;{[{M(Oxidation (M))|F}H]|[RQ]}DTK{M(Oxidation (M))|F}{I|L}TY 5.8756;5.6815;5.468;5.468;5.3041;5.2108;5.11;4.9776;4.9341;4.8965 -;-;-;-;-;-;-;-;-;- 902 1 2.076 45104.9 1.0 4817 3553 8365 DOHH2_400M_050219_1,8372 DOHH2_400M_050219_1,8372,KTDHFIFTY True True KTDHFIFTY 47.189932 586.29307860136 3780869.5 8365.0 ENSG00000116212|ENST00000371370|LRRC42 11.249532063802084 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8373 47.193 138.0 384970.0 25 0 80850.0 44103 YKIKSRVLMT 10 67 619.8696626611791 1237.724772389158 2 619.8695556521416 MULTI CID FTMS 0 0 0 8365 463997.03125 0.3577139207016788 3 -0.3761749267578125 8 Unmodified _YKIKSRVLMT_ ENSG00000146285|ENST00000369020|SCML4 1.3295316138638542 0.7204866299213272 1 N 1 10 2.2185 0.0 0.0 0.17924 0.0 0.0 991.6010826692346 129.05620752506096 1120.6572901942957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.17924 - 5 + 1 2.076 43106.2 1.0 4818 3553 8365 DOHH2_400M_050219_1,8373 DOHH2_400M_050219_1,8373,YKIKSRVLMT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8374 47.197 198.0 438070.0 25 0 47913.0 + 36831 TELERAFGYY 10 79 624.7984882597926 1247.5824235863852 2 624.7988769412041 MULTI CID FTMS 0 0 0 8365 340023.625 0.9854589691728552 -1 0.1539154052734375 9 Unmodified _TELERAFGYY_ ENSG00000112081|ENST00000373715|SRSF3;nc|ENSG00000112081|P84103-2|SRSF3 46.0223103267499 0.103496714999793 1 TENG{M(Oxidation (M))|F}ARKY 9 6 70.896 0.0 0.0 5.6826 0.0 0.0 0.0 178.05158411197502 178.05158411197502 41.96780933001144 0.0 0.0 0.0 0 1.079689690656103 1.6989700043360187 0.0 0.0 TENG{M(Oxidation (M))|F}ARKY 5.6826 - 395 + 1 2.076 70223.1 1.0 4819 3553 8365 DOHH2_400M_050219_1,8374 DOHH2_400M_050219_1,8374,TELERAFGYY True True TELERAFGYY 47.196534 624.798876941204 2525819.5 8365.0 nc|ENSG00000112081|P84103-2|SRSF3;;ENSG00000112081|ENST00000373715|SRSF3 9.101051012674969 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8375 47.201 211.0 346440.0 25 0 41654.0 + 43694 YAYDGKDYLAL 11 98 646.3136359374686 1290.612718941737 2 646.3140746951103 MULTI CID FTMS 0 0 0 8365 298278.09375 1.0 0 0.0 10 Unmodified _YAYDGKDYLAL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 35.61225514009592 0.279986979807413 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}AY{I|L} 11 6 + 58.016 0.0 0.0 4.4952 4.4952 73.464 0.0 0.0 0.0 14.554013542899426 41.81834051835986 14.554013542899426 1.4215905896025305 0 1.3182503180159344 2.0 0.8684151806525389 0.3252574989159953 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}AY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}Y[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DY{I|L}AAY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}YAAY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DY{I|L}AY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}YAY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAY{I|L}AY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}AYAY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAY{I|L}Y[{I|L}A] 4.4952;4.3851;4.3411;4.3411;4.2309;4.2309;4.1296;4.0288;3.9714;3.9186 -;-;-;-;-;-;-;-;-;- 3043 1 2.076 61060.1 1.0 4820 3553 8365 DOHH2_400M_050219_1,8375 DOHH2_400M_050219_1,8375,YAYDGKDYLAL False True YAYDGKDYLAL 47.200555 646.31407469511 1734767.75 8365.0 nc|ENSG00000204632|P17693-4|HLA-G;;nc|ENSG00000204632|P17693-5|HLA-G;;ENSG00000204632|ENST00000360323|HLA-G 3.576567014058431 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8376 47.207 367.0 182700.0 25 0 18081.0 + 31389 RPALTLRPAW 10 89 590.8485945482093 1179.6826361632186 2 590.8484374880791 MULTI CID FTMS 0 0 0 8365 247976.4375 1.0 0 0.0 11 Unmodified _RPALTLRPAW_ REV__ENST00000512382.1_7:296353-297053:+|nuORF 3.5964929083625545 0.7100006075494749 1 Y 1 -1 12.764 0.0 0.0 1.082 0.0 0.0 998.6080644852874 0.0 998.6080644852874 0.0 1.7951097132083405 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.082 - 10 + 1 2.076 56202.9 1.0 4821 3553 8365 DOHH2_400M_050219_1,8376 DOHH2_400M_050219_1,8376,RPALTLRPAW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8377 47.21 113.0 658710.0 25 0 65166.0 + 44076 YIVDHTIIM 9 117 552.7927366546345 1103.570920376069 2 552.7932006716728 MULTI CID FTMS 0 0 0 8365 214786.03125 0.9603636976910006 -1 0.1539154052734375 12 Unmodified _YIVDHTIIM_ ENSG00000133028|ENST00000255390|SCO1 42.09456458481378 0.0639583784996157 1 [Y{I|L}]VY{I|L}TW{M(Oxidation (M))|F} 8 4 + 64.066 0.0 0.0 5.8053 5.8053 82.383 0.0 0.0 0.0 31.358280790384256 3.940162615404077 3.940162615404077 4.731975075880328 0 0.0 2.0 1.274227503252014 0.0 [Y{I|L}]VY{I|L}TW{M(Oxidation (M))|F};[YV]{I|L}Y{I|L}TW{M(Oxidation (M))|F};[YV]Y{I|L}{I|L}TW{M(Oxidation (M))|F};[Y{I|L}]VY{I|L}[RD]Y;[Y{I|L}]VY[R{M(Oxidation (M))|F}]{I|L}M;[YV]{I|L}Y{I|L}[RD]Y;[Y{I|L}]VY{I|L}[R{M(Oxidation (M))|F}]M;[YV]Y{I|L}{I|L}[RD]Y;[Y{I|L}]VY[R{M(Oxidation (M))|F}]P{M(Oxidation (M))|F};[Y{I|L}]VY[R{M(Oxidation (M))|F}]M{I|L} 5.8053;5.3765;4.8541;4.2912;3.882;3.8624;3.7699;3.3399;3.3365;3.3365 -;-;-;-;-;-;-;-;-;- 837 + 1 2.076 61696.6 1.0 4822 3553 8365 DOHH2_400M_050219_1,8377 DOHH2_400M_050219_1,8377,YIVDHTIIM True True YIVDHTIIM 47.20955 552.793200671673 3065499.0 8365.0 ENSG00000133028|ENST00000255390|SCO1 5.465402603149414 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8378 47.219 524.0 170670.0 25 0 12413.0 11346 GFLRHISIRV 10 122 599.3619169613021 1196.709280989404 2 599.3619262576103 MULTI CID FTMS 0 0 0 8365 141694.21875 0.9771193800521076 1 -0.1165809631347656 13 Unmodified _GFLRHISIRV_ ENST00000478884.5_1_2:203881095-203927086:+|nuORF 3.944395688203298 0.708391353636983 1 W 1 10 11.783 0.0 0.0 0.98459 0.0 0.0 992.6188249120588 0.0 992.6188249120588 0.0 0.5236767526000641 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.98459 - 86 + 1 2.076 69131.7 1.0 4823 3553 8365 DOHH2_400M_050219_1,8378 DOHH2_400M_050219_1,8378,GFLRHISIRV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8379 47.227 443.0 189200.0 25 0 11840.0 + 29862 QQTDIAVNW 9 140 537.764116504621 0 537.7639648318291 PEAK CID FTMS 0 0 0 8365 137726.25 1.0 0 0.0 14 Unmodified _QQTDIAVNW_ ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF 74.92900055777586 0.0187618086720289 1 AQRN 4 7 16.674 0.0 0.0 1.5532 0.0 0.0 417.2005024094636 184.04096399478752 601.2414664042511 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.055462187404089 AQRN 1.5532 - 187 + 1 2.076 67943.1 1.0 4824 3553 8365 DOHH2_400M_050219_1,8379 DOHH2_400M_050219_1,8379,QQTDIAVNW True True QQTDIAVNW 47.226659 537.763964831829 914236.5 8365.0 ENST00000481281.5_1_1:32757770-32793222:+|nuORF;;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 5.279452800750732 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8380 47.233 371.0 264060.0 25 0 26025.0 -1 CFLLLLILSAF 11 111 437.2570756523872 1308.7493975573616 3 437.2562133669853 MULTI CID FTMS 0 0 0 8365 141836.78125 1.0 0 0.0 15 Carbamidomethyl (C) _C(Carbamidomethyl (C))FLLLLILSAF_ ENSG00000167700|ENST00000301327|MFSD3;ENST00000528047.5_1_8:145736154-145736544:+|nuORF 2.843284757254958 0.8617331327080043 1 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 1.1159 0.0 0.0 1143.669866772985 0.0 1143.669866772985 0.0 4.097719677709346 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1159 + + 51 + 1 2.076 85688.0 1.0 4825 3553 8365 DOHH2_400M_050219_1,8380 DOHH2_400M_050219_1,8380,CFLLLLILSAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8381 47.244 593.0 338260.0 25 0 49872.0 + 9627 FLLWSGVGLL 10 187 368.88552526478406 1103.6347463945522 3 368.8856078982353 MULTI CID FTMS 0 0 0 8365 124858.4296875 0.4732654521066661 -1 0.1539154052734375 16 Unmodified _FLLWSGVGLL_ REV__nc|ENSG00000167920|Q8N816-2|KRT10-AS1;REV__nc|ENSG00000167920|Q8N816|KRT10-AS1 29.081581746732265 0.3152867722954398 1 KGE{I|L}{I|L} 5 -1 37.356 0.0 0.0 3.3848 0.0 0.0 545.2985096662125 0.0 545.2985096662125 0.0 14.259687322722815 0.0 0.0 0 0.4247425010840047 0.0 0.2887254899964357 0.3054621874040891 KGE{I|L}{I|L} 3.3848 - 537 1 2.076 156631.9 1.0 4826 3553 8365 DOHH2_400M_050219_1,8381 DOHH2_400M_050219_1,8381,FLLWSGVGLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8382 47.259 800.0 85656.0 25 0 8260.8 + 35371 STDVSDLLHQY 11 107 639.3042754349133 1276.5939979366265 2 639.3055297732353 MULTI CID FTMS 0 0 0 8365 113402.2109375 1.0 0 0.0 17 Unmodified _STDVSDLLHQY_ ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000204264|P28062-2|PSMB8 55.23464941255904 0.0886405999673349 1 {[MG]|[TS]}DVS{NN|[MP]|[D{I|L}]|[EV]}{I|L}HQY 11 0 + 49.073 0.0 0.0 3.8441 3.8441 82.235 0.0 0.0 0.0 37.08330586532796 4.71573112682762 4.71573112682762 11.430545127691936 0 1.174742501084005 0.0 0.4247425010840047 0.2302046884880938 + + {[MG]|[TS]}DVS{NN|[MP]|[D{I|L}]|[EV]}{I|L}HQY;{[MG]|[TS]}DVS{NN|[MP]|[D{I|L}]|[EV]}{I|L}H[AG]Y;{[MG]|[TS]}DW{NN|[MP]|[D{I|L}]|[EV]}{I|L}HQY;{[MG]|[TS]}DW{NN|[MP]|[D{I|L}]|[EV]}{I|L}H[AG]Y;{[MG]|[TS]}DPP[DV][KQ]QY;{[MG]|[TS]}[MT]YQ[KQ]QY;{[MG]|[TS]}DPPYY[RH]AA 3.8441;2.9487;2.7225;1.8243;1.6709;1.2358;0.74503 +;-;-;-;-;-;- + 349 + 1 2.076 59037.7 0.6200000047683716 4827 3553 8365 DOHH2_400M_050219_1,8382 DOHH2_400M_050219_1,8382,STDVSDLLHQY True True STDVSDLLHQY 47.258704 639.305529773235 471686.65625 8365.0 ENSG00000204264|ENST00000374882|PSMB8;;nc|ENSG00000204264|P28062-2|PSMB8 7.00604248046875 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8383 47.273 800.0 156580.0 25 0 18159.0 + 31191 AEFQRDIML 9 139 561.8454177386901 1121.67628254418 2 561.8455688357353 MULTI CID FTMS 0 0 0 8365 103932.703125 1.0 0 0.0 18 Unmodified _RLPVIEPVSI_ nc|ENSG00000112983|Q9H0E9-3|BRD8;ENSG00000112983|ENST00000254900|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8 3.5964929083625545 0.7100006075494749 1 M{[CP]|[EA]}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}M{I|L} 8 7 13.365 0.0 0.0 1.1915 0.0 0.0 131.21968941020538 0.0 131.21968941020538 0.0 0.2659315044064687 0.0 0.0 0 0.0 0.0 0.0 0.0 M{[CP]|[EA]}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}M{I|L} 1.1915 - 271 + 1 2.076 99780.5 0.550000011920929 4828 3553 8365 DOHH2_400M_050219_1,8383 DOHH2_400M_050219_1,8383,RLPVIEPVSI False False AEFQRDIML 47.272536 561.845568835735 727694.0625 8365.0 nc|ENSG00000112983|Q9H0E9-3|BRD8;;ENSG00000112983|ENST00000254900|BRD8;;nc|ENSG00000112983|Q9H0E9-2|BRD8;;nc|ENSG00000112983|Q9H0E9-4|BRD8 6.289353211720784 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8384 47.286 800.0 97633.0 25 0 19452.0 + 29625 QMEDGHTLFDY 11 117 678.2828069573618 1354.5510609815235 2 678.2829467654228 MULTI CID FTMS 0 0 0 8365 98191.9140625 1.0 0 0.0 19 Unmodified _QMEDGHTLFDY_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1;UHRF1-KDM4B|1|fusion;UHRF1-KDM4B|2|fusion 5.731851221503515 0.8481046878870278 1 DY 2 9 14.974 0.0 0.0 1.1055 0.0 0.0 1058.4494202117953 0.0 1058.4494202117953 0.0 4.555912674110017 0.0 0.0 0 0.0 0.0 0.25 0.0 + DY 1.1055 + + 103 + 1 2.076 69977.2 0.5899999737739563 4829 3553 8365 DOHH2_400M_050219_1,8384 DOHH2_400M_050219_1,8384,QMEDGHTLFDY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8385 47.292 258.0 329320.0 25 0 56949.0 + 32473 SAIPHPLIM 9 102 489.775825967378 977.537099001556 2 489.7752563357353 MULTI CID FTMS 0 0 0 8365 98962.65625 0.4343824078968918 -1 0.1539154052734375 20 Unmodified _SAIPHPLIM_ ENSG00000166200|ENST00000388901|COPS2;ENST00000559016.1_1_15:49426483-49429634:-|nuORF;nc|ENSG00000166200|P61201-2|COPS2 44.40701690623563 0.0526327925666318 1 {[SA]|[TG]}{I|L}PH[{I|L}P]{I|L}M 9 0 {[SA]|[TG]}{I|L} + + 33.391 23.301 8.5933 3.4158 3.4158 51.47 0.0 0.0 0.0 0.0 4.2609125905568135 0.0 0.0 0 1.0994850021680094 0.0 0.0 0.0 + + {[SA]|[TG]}{I|L}PH[{I|L}P]{I|L}M 3.4158 + + 213 + 1 2.076 68728.5 1.0 4830 3553 8365 DOHH2_400M_050219_1,8385 DOHH2_400M_050219_1,8385,SAIPHPLIM True True SAIPHPLIM 47.292327 489.775256335735 1288449.5 8365.0 ENST00000559016.1_1_15:49426483-49429634:-|nuORF;;nc|ENSG00000166200|P61201-2|COPS2;;ENSG00000166200|ENST00000388901|COPS2 6.300312519073486 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8387 47.297 29.0 2063300.0 25 0 200350.0 + 33021 SEPDFVAKF 9 66 520.2584745906022 1038.5023962480043 2 520.2586547732353 MULTI CID FTMS 0 0 0 8386 1769139.5 0.5042085913760767 1 -0.1460533142089843 1 Unmodified _SEPDFVAKF_ ENSG00000179933|ENST00000319074|C14orf119 27.628801355627647 0.1796483985696185 1 {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F} 9 0 + 44.09 0.0 0.0 4.2456 4.2456 84.508 0.0 0.0 0.0 14.6265249738142 5.498037644757048 5.498037644757048 15.740312677277185 0 0.4247425010840047 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}P[{I|L}T]{M(Oxidation (M))|F}AK{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}P[VP]PD[W{I|L}];{[ES]|[DT]|[{I|L}C]}[RH]PD[W{I|L}];{[ES]|[DT]|[{I|L}C]}P[VP]V[HQ]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}P[RH]D[W{I|L}];{[ES]|[DT]|[{I|L}C]}[RH]V[HQ]{M(Oxidation (M))|F} 4.2456;2.7299;2.2005;1.5767;1.5041;1.2635;0.8803 +;-;-;-;-;-;- + 272 + 1 2.067 50770.9 1.0 4831 3554 8386 DOHH2_400M_050219_1,8387 DOHH2_400M_050219_1,8387,SEPDFVAKF False True SEPDFVAKF 47.297162 520.258654773235 55295992.0 8386.0 ENSG00000179933|ENST00000319074|C14orf119 7.062900066375732 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8388 47.299 93.0 454420.0 25 0 37665.0 + 733 AEQDFISKF 9 74 542.7685273194684 1083.5225017057369 2 542.7693359255791 MULTI CID FTMS 0 0 0 8386 410822.09375 0.1236639134513545 2 -0.2595939636230469 2 Unmodified _AEQDFISKF_ ENSG00000090989|ENST00000381295|EXOC1;ENST00000504321.1_1_4:56755058-56759725:+|nuORF;ENST00000511971.5_1_4:56749994-56766742:+|nuORF;nc|ENSG00000090989|Q9NV70-2|EXOC1 33.4449034751529 0.1114409586740657 1 {[CP]|[EA]}QD{M(Oxidation (M))|F}{I|L}SK{M(Oxidation (M))|F} 9 0 + 61.035 0.0 0.0 5.6331 5.6331 86.662 0.0 0.0 0.0 47.05600086895004 12.252684618815088 12.252684618815088 9.208187539523747 0 0.7614393726401688 0.0 0.0 0.4247425010840047 + + {[CP]|[EA]}QD{M(Oxidation (M))|F}{I|L}SK{M(Oxidation (M))|F};{[CP]|[EA]}[AG]D{M(Oxidation (M))|F}{I|L}SK{M(Oxidation (M))|F};{[CP]|[EA]}QD{M(Oxidation (M))|F}{I|L}[KA]Y;{[CP]|[EA]}[AG]D{M(Oxidation (M))|F}{I|L}[KA]Y;{[CP]|[EA]}QRR{[{M(Oxidation (M))|F}D]|MM}Y;{[CP]|[EA]}QRR{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F} 5.6331;4.7832;4.2421;3.3923;1.8613;1.7995 +;-;-;-;-;- + 85 + 1 2.067 39556.0 1.0 4832 3554 8386 DOHH2_400M_050219_1,8388 DOHH2_400M_050219_1,8388,AEQDFISKF True True AEQDFISKF 47.299202 542.769335925579 63410292.0 8386.0 nc|ENSG00000090989|Q9NV70-2|EXOC1;;ENST00000511971.5_1_4:56749994-56766742:+|nuORF;;ENST00000504321.1_1_4:56755058-56759725:+|nuORF;;ENSG00000090989|ENST00000381295|EXOC1 7.732098738352458 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8389 47.302 122.0 516060.0 25 0 101900.0 + 44064 YIRRFMRKL 9 73 641.8826648067551 1281.75077668031 2 641.8829833865166 MULTI CID FTMS 0 0 0 8386 552815.0 0.4534421822051124 -2 0.2704963684082031 3 Unmodified _YIRRFMRKL_ REV__ENSG00000146834|ENST00000310512|MEPCE;REV__nc|ENSG00000289690|Q7L2J0-2|MEPCE 2.302733041254933 0.8342969208511092 1 [Y{I|L}]DM 4 -1 12.396 0.0 0.0 0.9671 0.0 0.0 0.0 756.502460600485 756.502460600485 2.3957751657678727 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [Y{I|L}]DM 0.9671 - 22 1 2.067 55220.5 1.0 4833 3554 8386 DOHH2_400M_050219_1,8389 DOHH2_400M_050219_1,8389,YIRRFMRKL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8390 47.304 132.0 590360.0 25 0 52203.0 39756 VELMGREL 8 99 473.7534073751055 0 473.7535278201103 PEAK CID FTMS 0 0 0 8386 489061.125 0.761985011104076 -1 0.1165809631347656 4 Unmodified _VELMGREL_ ENSG00000115159|ENST00000438166|GPD2;ENST00000464846.5_1_2:157427687-157435520:+|nuORF;nc|ENSG00000115159|P43304-2|GPD2 50.855029805455786 0.1048788807644274 1 {I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D 5 5 18.671 0.0 0.0 1.9747 0.0 0.0 228.10992982707663 82.06701837711171 310.1769482041884 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 1.274227503252014 0.0 {I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D 1.9747 - 92 + 1 2.067 63328.9 1.0 4834 3554 8386 DOHH2_400M_050219_1,8390 DOHH2_400M_050219_1,8390,VELMGREL True False EVGPRFEL 47.304414 473.75352782011 4249585.5 8386.0 ENST00000460766.5_1_2:131100637-131104038:+|nuORF;;ENSG00000136718|ENST00000259239|IMP4;;ENST00000475074.1_1_2:131103527-131104038:+|nuORF 4.409000873565674 2.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8391 47.308 158.0 419720.0 25 0 29971.0 + 11206 GENSGIGKLF 10 101 511.2689609907805 1020.5233690483608 2 511.2694579958916 MULTI CID FTMS 0 0 0 8386 376348.8125 1.0 0 0.0 5 Unmodified _GENSGIGKLF_ ENSG00000129534|ENST00000310806|MIS18BP1 45.739877483867886 0.1051543674217965 1 {[DA]|[EG]}NSG{I|L}GK{I|L}{M(Oxidation (M))|F} 10 0 + 79.488 0.0 0.0 7.7889 7.7889 90.43 0.0 0.0 0.0 7.7815125038364386 8.32508912706237 7.7815125038364386 8.32508912706237 0 1.055462187404089 1.6989700043360187 0.3807196863200844 0.0 + + {[DA]|[EG]}NSG{I|L}GK{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}NSG{I|L}GK{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}GGSG{I|L}GK{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}GGSG{I|L}GK{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}NS{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}NS{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}GGS{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}N[WK]K{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}EE{I|L}GK{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}GGS{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}{I|L} 7.7889;6.9731;6.8909;6.0751;5.9014;5.0857;4.9991;4.5749;4.5722;4.1834 +;-;-;-;-;-;-;-;-;- + 365 + 1 2.067 53229.8 1.0 4835 3554 8386 DOHH2_400M_050219_1,8391 DOHH2_400M_050219_1,8391,GENSGIGKLF True True GENSGIGKLF 47.307539 511.269457995892 2433624.0 8386.0 ENSG00000129534|ENST00000310806|MIS18BP1 7.355555375417073 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8392 47.311 159.0 160310.0 25 0 9199.2 -1 0 52 881.413472732213 1760.812392531226 2 881.9151489138603 MULTI CID FTMS 0 0 0 8386 329444.46875 0.4009707607899817 1 -0.1460533142089843 6 1 Y{M(Oxidation (M))|F}ANQQA[CS]VC(Carbamidomethyl (C)){I|L} 12 -1 49.607 0.0 0.0 2.8173 0.0 0.0 358.2079746618884 0.0 358.2079746618884 0.0 44.122082435229615 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F}ANQQA[CS]VC(Carbamidomethyl (C)){I|L} 2.8173 - 457 + 1 2.067 28591.4 1.0 4836 3554 8386 DOHH2_400M_050219_1,8392 DOHH2_400M_050219_1,8392, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8393 47.315 249.0 506710.0 25 0 54031.0 + 5560 DMLVKVNAL 9 133 501.7863277833527 1001.5581026335052 2 501.7868224978447 MULTI CID FTMS 0 0 0 8386 320180.1875 0.3436683974362544 -1 0.1165809631347656 7 Unmodified _DMLVKVNAL_ ENSG00000106144|ENST00000310447|CASP2;ENST00000472067.1_1_7:143000848-143002161:+|nuORF;ENST00000493642.5_1_7:142991831-143002161:+|nuORF 88.95385435242217 0.0153473310052057 1 [MD]{I|L}VKVNA{I|L} 9 0 + 75.976 0.0 0.0 7.5858 7.5858 91.999 0.0 0.0 0.0 40.09922092541527 14.206094119810544 14.206094119810544 9.208187539523747 0 1.9876954943324543 2.0 0.0 1.1307196863200843 + + [MD]{I|L}VKVNA{I|L};[MD]{I|L}VKVGGA{I|L};{[QG]|[NA]}VKV{[CA]|SS}NA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NAV{[CA]|SS}NA{I|L};[{I|L}V]KV[MD]NA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V[MD]NA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}[MD]NA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NVA{[CA]|SS}NA{I|L};[{I|L}V]KVN[MD]A{I|L};{[QG]|[NA]}VKV{[CA]|SS}GGA{I|L} 7.5858;6.6664;2.6866;2.6434;2.2792;2.1301;2.0053;1.8576;1.7812;1.7715 +;-;-;-;-;-;-;-;-;- + 1108 + 1 2.067 100441.2 1.0 4837 3554 8386 DOHH2_400M_050219_1,8393 DOHH2_400M_050219_1,8393,DMLVKVNAL True True DMLVKVNAL 47.315331 501.786822497845 4862469.0 8386.0 ENSG00000106144|ENST00000310447|CASP2;;ENST00000493642.5_1_7:142991831-143002161:+|nuORF;;ENST00000472067.1_1_7:143000848-143002161:+|nuORF 6.080966949462891 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8394 47.323 445.0 573910.0 25 0 73202.0 + 43434 WSDGHLIYY 9 160 577.2692372310403 1152.5239215288805 2 577.2696411013603 MULTI CID FTMS 0 0 0 8386 294731.46875 0.0945773734075666 -1 0.1165809631347656 8 Unmodified _WSDGHLIYY_ ENSG00000115762|ENST00000693505|PLEKHB2;nc|ENSG00000115762|Q96CS7-2|PLEKHB2;nc|ENSG00000115762|Q96CS7-3|PLEKHB2;nc|ENSG00000115762|Q96CS7-4|PLEKHB2;nc|ENSG00000115762|Q96CS7-5|PLEKHB2;nc|ENSG00000115762|Q96CS7-6|PLEKHB2 64.23631603340823 0.0237365939569086 1 WSA{I|L}WD{[NV]|[RG]}Y 9 6 + 77.37 0.0 0.0 6.7131 6.7131 82.252 0.0 0.0 0.0 32.96089506174274 4.303032168931665 4.303032168931665 2.3550201325557936 0 1.524227503252014 1.2218487496163564 0.9392404878284264 0.9247425010840048 WSA{I|L}WD{[NV]|[RG]}Y;WSAW{I|L}D{[NV]|[RG]}Y;WSA{I|L}WS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};WSAW{I|L}S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};WSA{I|L}{I|L}C(Carbamidomethyl (C)){[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};WSA{I|L}{[DA]|[EG]}D{[NV]|[RG]}Y;WSA{[DA]|[EG]}{I|L}D{[NV]|[RG]}Y;WSA{I|L}C(Carbamidomethyl (C)){I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}PPSW{I|L}YY;[H{I|L}]GDS{I|L}WYY 6.7131;6.5088;6.269;6.0646;6.0066;5.9142;5.7098;5.58;5.5476;5.5025 -;-;-;-;-;-;-;-;-;- 5440 + 1 2.067 192070.5 1.0 4838 3554 8386 DOHH2_400M_050219_1,8394 DOHH2_400M_050219_1,8394,WSDGHLIYY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8395 47.326 128.0 613750.0 25 0 70269.0 + 19377 LERKFGEII 9 115 552.8251721149552 1103.6357912967103 2 552.8247558474541 MULTI CID FTMS 0 0 0 8386 279402.96875 0.3748827770012061 -1 0.1165809631347656 9 Unmodified _LERKFGEII_ REV__ENSG00000164978|ENST00000379158|NUDT2 24.99096001346401 0.2132109383330889 1 [Y{I|L}][RD]Q{I|L}A{I|L}{I|L} 9 -1 + 49.253 0.0 0.0 4.4628 4.4628 74.024 0.0 0.0 0.0 16.706962271689747 27.464825806156256 16.706962271689747 1.817496819840656 0 0.2887254899964357 2.0 0.3054621874040891 0.0 [Y{I|L}][RD]Q{I|L}A{I|L}{I|L};[Y{I|L}][RD]Q{I|L}{I|L}A{I|L};[Y{I|L}][RD]QA{I|L}{I|L}{I|L};[Y{I|L}][RD]{I|L}QA{I|L}{I|L};[Y{I|L}][RD]{I|L}Q{I|L}A{I|L};[Y{I|L}][RD][AG]{I|L}A{I|L}{I|L};[Y{I|L}][RD][AG]{I|L}{I|L}A{I|L};[Y{I|L}][RD][AG]A{I|L}{I|L}{I|L};[Y{I|L}][RD]{I|L}[AG]A{I|L}{I|L};[Y{I|L}][RD]{I|L}[AG]{I|L}A{I|L} 4.4628;4.2981;4.2825;4.1022;3.9375;3.6284;3.4637;3.4481;3.2679;3.1032 -;-;-;-;-;-;-;-;-;- 1128 1 2.067 65099.5 1.0 4839 3554 8386 DOHH2_400M_050219_1,8395 DOHH2_400M_050219_1,8395,LERKFGEII False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8396 47.331 248.0 300550.0 25 0 40879.0 + 38727 TTYILLAHIS 10 90 566.3219624811511 1130.629372029102 2 566.3221313357353 MULTI CID FTMS 0 0 0 8386 267915.03125 0.5518377370875779 1 -0.1460533142089843 10 Unmodified _TTYILLAHIS_ REV__ENST00000405154.6_1_12:26222190-26222259:+|nuORF 3.5964929083625545 0.7100006075494749 1 Y 1 -1 12.764 0.0 0.0 1.1289 0.0 0.0 949.5551055269522 0.0 949.5551055269522 0.0 3.991773182359655 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1289 + + 18 + 1 2.067 63947.4 1.0 4840 3554 8386 DOHH2_400M_050219_1,8396 DOHH2_400M_050219_1,8396,TTYILLAHIS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8397 47.344 800.0 223640.0 25 0 34753.0 + 20462 RYYSGLIYTY 10 163 650.3959358891773 1298.7773188451545 2 650.3961059451103 MULTI CID FTMS 0 0 0 8386 213174.125 0.341105172092906 -2 0.2704963684082031 11 Unmodified _LLKRLFLFSY_ ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;ENSG00000105357|ENST00000642316|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580|MYH10;ENSG00000133026|ENST00000360416|MYH10 1.6526216038709556 0.7189921496796233 1 YG{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AKTY 9 8 26.819 0.0 0.0 2.065 0.0 0.0 225.24187070237943 0.0 225.24187070237943 0.0 19.82956253501805 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 YG{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AKTY 2.065 - 382 + 1 2.067 149067.9 0.8199999928474426 4841 3554 8386 DOHH2_400M_050219_1,8397 DOHH2_400M_050219_1,8397,LLKRLFLFSY False False RYYSGLIYTY 47.344341 650.39610594511 538884.0 8386.0 ENSG00000100345|ENST00000216181|MYH9;;nc|ENSG00000133026|P35580-3|MYH10;;nc|ENSG00000133026|P35580-5|MYH10;;ENSG00000105357|ENST00000642316|MYH14;;nc|ENSG00000133026|P35580-2|MYH10;;nc|ENSG00000105357|Q7Z406-4|MYH14;;nc|ENSG00000105357|Q7Z406-5|MYH14;;nc|ENSG00000105357|Q7Z406-6|MYH14;;nc|ENSG00000105357|Q7Z406|MYH14;;nc|ENSG00000133026|P35580|MYH10;;ENSG00000133026|ENST00000360416|MYH10 4.435797850290935 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8398 47.358 800.0 131580.0 25 0 37729.0 + 14290 IEKKEKYFRL 10 120 677.3957656925392 1352.7769784518782 2 677.3962890505791 MULTI CID FTMS 0 0 0 8386 206963.484375 0.3447636343873697 -4 0.502777099609375 12 Unmodified _IEKKEKYFRL_ REV__ENSG00000145721|ENST00000274382|LIX1 1.4819007175156935 0.719781833666733 1 Y 1 -1 11.109 0.0 0.0 0.82122 0.0 0.0 1171.7026356557828 0.0 1171.7026356557828 0.0 0.7306401783911909 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.82122 + + 114 + 1 2.067 93312.3 0.8100000023841858 4842 3554 8386 DOHH2_400M_050219_1,8398 DOHH2_400M_050219_1,8398,IEKKEKYFRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8399 47.362 204.0 379270.0 25 0 53017.0 + 6459 EAFLKHIL 8 120 485.7900017659039 0 485.7900573611259 PEAK CID FTMS 0 0 0 8386 154822.78125 1.0 0 0.0 13 Unmodified _EAFLKHIL_ ENSG00000196465|ENST00000695999|MYL6B;ENST00000548548.1_1_12:56551205-56551507:+|nuORF;ENST00000549178.5_1_12:56548807-56551507:+|nuORF 50.855029805455786 0.1048788807644274 1 QPV{I|L}{M(Oxidation (M))|F} 5 7 19.068 0.0 0.0 1.9667 0.0 0.0 131.09583730017 251.11568628482652 382.2115235849966 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 QPV{I|L}{M(Oxidation (M))|F} 1.9667 - 117 + 1 2.067 63030.3 1.0 4843 3554 8386 DOHH2_400M_050219_1,8399 DOHH2_400M_050219_1,8399,EAFLKHIL True True EAFLKHIL 47.362058 485.790057361126 614553.4375 8386.0 ENST00000548548.1_1_12:56551205-56551507:+|nuORF;;ENST00000549178.5_1_12:56548807-56551507:+|nuORF;;ENSG00000196465|ENST00000695999|MYL6B 2.5006134510040283 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8400 47.374 677.0 197130.0 25 0 21957.0 + 480 AEGGWGCLGY 10 170 506.7139993190765 1011.4134457049528 2 506.7137939333916 MULTI CID FTMS 0 0 0 8386 154154.25 1.0 0 0.0 14 Unmodified _AEGGWGCLGY_ ENSG00000090971|ENST00000205194|NAT14 7.289230182591677 0.6929195370588109 1 {I|L}GY 3 7 21.972 0.0 0.0 2.1724 0.0 0.0 660.2343208043654 0.0 660.2343208043654 0.0 10.713337517843655 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}GY 2.1724 + + 301 + 1 2.067 103031.3 1.0 4844 3554 8386 DOHH2_400M_050219_1,8400 DOHH2_400M_050219_1,8400,AEGGWGCLGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8401 47.389 800.0 255720.0 25 0 20789.0 + 43590 YAEEEASPM 9 186 513.7087758910327 1025.4029988488653 2 513.7087280154228 MULTI CID FTMS 0 0 0 8386 144158.734375 1.0 0 0.0 15 Unmodified _YAEEEASPM_ REV__ENSG00000100154|ENST00000397906|TTC28 30.22481116460888 0.1466181017706357 1 YAP 3 -1 33.332 0.0 0.0 3.2507 0.0 0.0 0.0 691.242054858524 691.242054858524 16.738569581344507 0.0 0.0 0.0 0 0.2742275032520141 1.154901959985743 0.0 0.0 YAP 3.2507 - 312 + 1 2.067 154578.3 0.5600000023841858 4845 3554 8386 DOHH2_400M_050219_1,8401 DOHH2_400M_050219_1,8401,YAEEEASPM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8402 47.398 494.0 191970.0 25 0 12900.0 + + 34392 AEVISVLQKY 10 150 574.3296124682229 1146.6446720032457 2 574.8356811404228 MULTI CID FTMS 0 0 0 8386 136258.40625 0.4163171950354373 2 -0.2595939636230469 16 Unmodified _SLVALPWFKS_ ENST00000558825.5_1_15:91337395-91358506:+|nuORF;ENSG00000197299|ENST00000355112|BLM;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 15.248480904072842 0.5916873121453583 1 [TP]V{I|L} 4 -1 16.198 0.0 0.0 1.4126 0.0 0.0 0.0 733.3915026375322 733.3915026375322 1.341349888432358 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [TP]V{I|L} 1.4126 - 595 + 1 2.067 72050.4 1.0 4846 3554 8386 DOHH2_400M_050219_1,8402 DOHH2_400M_050219_1,8402,SLVALPWFKS False False AEVISVLQKY 47.397856 574.835681140423 165330.9375 8386.0 ENST00000558825.5_1_15:91337395-91358506:+|nuORF;;ENSG00000197299|ENST00000355112|BLM;;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 4.255549271901448 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8403 47.408 574.0 217620.0 25 0 30452.0 45526 YTTSFWVIFF 10 116 437.5545461814402 1309.6418091445207 3 437.5547363162041 MULTI CID FTMS 0 0 0 8386 129871.46875 1.0 0 0.0 17 Unmodified _YTTSFWVIFF_ ENSG00000163646|ENST00000327047|CLRN1;nc|ENSG00000163646|P58418-4|CLRN1 26.88365393820708 0.3646707531412818 1 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 7 23.404 0.0 0.0 1.7871 0.0 0.0 884.411090390744 0.0 884.411090390744 0.0 13.940162615404075 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.7871 + + 40 1 2.067 104278.1 1.0 4847 3554 8386 DOHH2_400M_050219_1,8403 DOHH2_400M_050219_1,8403,YTTSFWVIFF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8404 47.422 800.0 118280.0 25 0 42365.0 30836 RIKRKNRHEK 10 109 682.9217542313421 1363.828955529484 2 682.9213134646416 MULTI CID FTMS 0 0 0 8386 110847.3515625 0.5341644438146385 -2 0.2704963684082031 18 Unmodified _RIKRKNRHEK_ ENST00000389467.3_16:18871006-18872062:-|nuORF 3.5964929083625545 0.7100006075494749 1 Y 1 10 11.783 0.0 0.0 0.86395 0.0 0.0 1182.7543685927635 0.0 1182.7543685927635 0.0 0.9452811811002436 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.86395 - 24 + 1 2.067 73775.4 0.5400000214576721 4848 3554 8386 DOHH2_400M_050219_1,8404 DOHH2_400M_050219_1,8404,RIKRKNRHEK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8405 47.437 800.0 133830.0 25 0 8871.5 + 453 AEFQRDIML 9 142 561.785211476234 0 561.7850829958916 PEAK CID FTMS 0 0 0 8386 93027.4453125 1.0 0 0.0 19 Unmodified _AEFQRDIML_ ENSG00000112983|ENST00000254900|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8 24.99096001346401 0.1558265925128033 1 M{I|L} 2 7 15.217 0.0 0.0 1.3567 0.0 0.0 131.1050230455499 743.3124587781401 874.41748182369 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + M{I|L} 1.3567 + + 109 + 1 2.067 84366.3 0.4799999892711639 4849 3554 8386 DOHH2_400M_050219_1,8405 DOHH2_400M_050219_1,8405,AEFQRDIML False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8406 47.438 68.0 971830.0 25 0 276280.0 + 35102 SQVRPSHLSIK 11 59 626.3616834876276 0 626.3614990115166 PEAK CID FTMS 0 0 0 8386 255592.453125 0.4326095474592377 -1 0.1165809631347656 20 Unmodified _SQVRPSHLSIK_ REV__ENSG00000171931|ENST00000395665|FBXW10;REV__nc|ENSG00000171931|Q5XX13-2|FBXW10;REV__nc|ENSG00000171931|Q5XX13-3|FBXW10;REV__nc|ENSG00000171931|Q5XX13-4|FBXW10 4.189502756095605 0.4761840153648598 1 M 1 -1 3.0989 0.0 0.0 0.24778 0.0 0.0 660.3694718563114 456.2760408990844 1116.645512755396 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.24778 - 2 + 1 2.067 53401.3 1.0 4850 3554 8386 DOHH2_400M_050219_1,8406 DOHH2_400M_050219_1,8406,SQVRPSHLSIK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8408 47.444 47.0 1030400.0 25 0 234490.0 + 37246 TIMPKDIQL 9 70 529.7992042128877 1057.5838554925754 2 529.7999145388603 MULTI CID FTMS 0 0 0 8407 795859.75 0.2088872516754771 1 -0.1135406494140625 1 Unmodified _TIMPKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 24.99096001346401 0.2132109383330889 1 [{I|L}T]MRM 5 6 40.898 0.0 0.0 3.8671 0.0 0.0 0.0 422.2403048151001 422.2403048151001 7.375437381428746 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 [{I|L}T]MRM 3.8671 - 189 + 1 2.064 43548.2 1.0 4851 3555 8407 DOHH2_400M_050219_1,8408 DOHH2_400M_050219_1,8408,TIMPKDIQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8409 47.445 32.0 1389800.0 25 0 336380.0 7663 EKKKTYIMKP 10 54 633.3693617495003 1264.7241705658005 2 633.3697997927666 MULTI CID FTMS 0 0 0 8407 1742023.75 0.7726562156949974 -1 0.1460533142089843 2 Unmodified _EKKKTYIMKP_ ENST00000272793.9_1_2:170938445-170938493:+|nuORF 1.4819007175156935 0.719781833666733 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.064 42148.1 1.0 4852 3555 8407 DOHH2_400M_050219_1,8409 DOHH2_400M_050219_1,8409,EKKKTYIMKP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8410 47.446 28.0 2184200.0 25 0 501890.0 22267 LPRPIKTY 8 64 494.3009734339386 986.5873939346772 2 494.3011657595634 MULTI CID FTMS 0 0 0 8407 2273317.5 0.793451709125209 -1 0.1460533142089843 3 Unmodified _LPRPIKTY_ ENST00000568150.2_1_16:48657430-48778223:+|nuORF 2.577480529830294 0.808687252328423 1 TY 2 6 16.198 0.0 0.0 1.6418 0.0 0.0 704.4644824129961 0.0 704.4644824129961 0.0 16.197887582883936 0.0 0.0 0 0.0 0.0 0.0 0.0 + TY 1.6418 + + 11 + 1 2.064 55175.3 1.0 4853 3555 8407 DOHH2_400M_050219_1,8410 DOHH2_400M_050219_1,8410,LPRPIKTY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8411 47.447 41.0 1468700.0 25 0 319930.0 + 18628 LAFLVVVLM 9 71 502.8141491300764 1003.6137453269528 2 502.8142272830009 MULTI CID FTMS 0 0 0 8407 1215163.0 0.5722057385243404 -1 0.1460533142089843 4 Unmodified _LAFLVVVLM_ REV__ENSG00000123901|ENST00000243673|GPR83;REV__nc|ENSG00000123901|Q9NYM4-2|GPR83 2.302733041254933 0.8342969208511092 1 {I|L} 1 -1 11.109 0.0 0.0 1.1069 0.0 0.0 872.5186658365216 0.0 872.5186658365216 0.0 -6.849556425358969 -6.849556425358969 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1069 + + 16 + 1 2.064 50778.8 1.0 4854 3555 8407 DOHH2_400M_050219_1,8411 DOHH2_400M_050219_1,8411,LAFLVVVLM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8412 47.451 177.0 552260.0 25 0 131960.0 + 38827 TVGVIVRL 8 97 428.7845093781013 855.5544658230026 2 428.7843505740166 MULTI CID FTMS 0 0 0 8407 411341.9375 1.0 0 0.0 5 Unmodified _TVGVIVRL_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 48.345845343767074 0.1470278396477103 1 TVGV{I|L}V[R{I|L}] 8 0 + 72.894 0.0 0.0 8.5201 8.5201 97.159 0.0 0.0 0.0 61.73541089559906 6.747425010840047 6.747425010840047 22.998037644757048 0 0.8494850021680094 2.0 0.0 0.3252574989159953 + + TVGV{I|L}V[R{I|L}];TV{I|L}[VG]V[R{I|L}] 8.5201;5.832 +;- + 127 + 1 2.064 84639.1 1.0 4855 3555 8407 DOHH2_400M_050219_1,8412 DOHH2_400M_050219_1,8412,TVGVIVRL False True TVGVIVRL 47.450503 428.784350574017 2694160.75 8407.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 2.543911005059878 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8413 47.453 124.0 504020.0 25 0 53523.0 + 11134 GEIEGLNDTF 10 103 547.7540903122126 0 547.7540771365166 PEAK CID FTMS 0 0 0 8407 404696.09375 1.0 0 0.0 6 Unmodified _GEIEGLNDTF_ ENSG00000143401|ENST00000583931|ANP32E;nc|ENSG00000143401|Q9BTT0-2|ANP32E 43.85829265575387 0.0827756760151878 1 {I|L}GE{I|L} 4 8 14.447 0.0 0.0 1.3211 0.0 0.0 495.1956063062626 183.0416964166625 678.2373027229252 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5774509799928715 0.0 {I|L}GE{I|L} 1.3211 - 233 + 1 2.064 56366.0 1.0 4856 3555 8407 DOHH2_400M_050219_1,8413 DOHH2_400M_050219_1,8413,GEIEGLNDTF True True GEIEGLNDTF 47.453061 547.754077136517 2674305.0 8407.0 nc|ENSG00000143401|Q9BTT0-2|ANP32E;;ENSG00000143401|ENST00000583931|ANP32E 4.504945119222005 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8414 47.456 133.0 417790.0 25 0 22736.0 + 6189 DTEFPNFKY 9 93 580.7666409114785 1159.5187288897569 2 580.7671386599541 MULTI CID FTMS 0 0 0 8407 392690.84375 0.2518071406975547 3 -0.4153976440429687 7 Unmodified _DTEFPNFKY_ ENSG00000132383|ENST00000254719|RPA1 49.93300154707207 0.0405168250806675 1 {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY 9 0 + 44.792 0.0 0.0 3.8629 3.8629 80.543 0.0 0.0 0.0 19.731975075880325 12.09614293199344 12.09614293199344 9.208187539523747 0 0.6989700043360187 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PGG{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PT[HK]W;{[ES]|[DT]|[{I|L}C]}[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}KPGW;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[EC]{M(Oxidation (M))|F}KPGW;{[ES]|[DT]|[{I|L}C]}[Y{M(Oxidation (M))|F}]K{M(Oxidation (M))|F}PGW;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[EC]K{M(Oxidation (M))|F}PGW;[AG]{[ET]|[MV]}K{M(Oxidation (M))|F}[EC]{I|L}Y;{[ES]|[DT]|[{I|L}C]}[Y{M(Oxidation (M))|F}]K{[DS]|[MA]|[CV]|TT}VW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[DS]|[MA]|[CV]|TT}R[EC]{I|L}Y 3.8629;3.0688;2.721;2.0373;1.7359;1.1898;0.88835;0.31925;0.17547;0.030368 +;-;-;-;-;-;-;-;-;- + 297 + 1 2.064 46010.9 1.0 4857 3555 8407 DOHH2_400M_050219_1,8414 DOHH2_400M_050219_1,8414,DTEFPNFKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8415 47.458 130.0 541110.0 25 0 43035.0 + 36686 TDAEFRQMW 9 98 592.2634066491166 1182.5122603650332 2 592.2639037966728 MULTI CID FTMS 0 0 0 8407 347501.90625 1.0 0 0.0 8 Unmodified _TDAEFRQMW_ ENSG00000129083|ENST00000439561|COPB1;ENST00000526527.1_1_11:14481741-14482839:-|nuORF 83.42873516780209 0.0166860047644719 1 TD{M(Oxidation (M))|F}GMQ[W{I|L}]W 9 6 + 68.541 0.0 0.0 5.7962 5.7962 81.375 0.0 0.0 0.0 36.51409360265546 2.355312426617573 2.355312426617573 3.7371250542002334 0 0.9247425010840048 1.3979400086720375 0.0 0.3252574989159953 TD{M(Oxidation (M))|F}GMQ[W{I|L}]W;TD{M(Oxidation (M))|F}[NG]GKQMW;TDAE[WR]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F};TD{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}KQMW;{[ES]|[DT]|[{I|L}C]}AE{M(Oxidation (M))|F}RQMW;TD{M(Oxidation (M))|F}GM[AG][W{I|L}]W;[TA]DE{M(Oxidation (M))|F}RQMW;{[ES]|[DT]|[{I|L}C]}AE{M(Oxidation (M))|F}R[AG]MW;{[CP]|[EA]}SE{M(Oxidation (M))|F}RQMW;TM[KC]R{M(Oxidation (M))|F}ED[PG] 5.7962;5.4802;5.2078;5.0093;4.7915;4.7425;4.0293;4.0128;3.654;3.2781 -;-;-;-;+;-;-;-;-;- + 483 + 1 2.064 58084.2 1.0 4858 3555 8407 DOHH2_400M_050219_1,8415 DOHH2_400M_050219_1,8415,TDAEFRQMW True True TDAEFRQMW 47.458445 592.263903796673 2179015.0 8407.0 ENSG00000129083|ENST00000439561|COPB1;;ENST00000526527.1_1_11:14481741-14482839:-|nuORF 7.966841220855713 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8416 47.461 141.0 639380.0 25 0 52092.0 + 5464 DLRIAHML 8 102 484.77148264662526 967.5284123600504 2 484.7711669802666 MULTI CID FTMS 0 0 0 8407 334035.65625 0.5668070523887402 -1 0.1460533142089843 9 Unmodified _DLRIAHML_ ENSG00000182378|ENST00000381657|PLCXD1;ENST00000484611.7_1_X:200851-207455:+|nuORF 36.12702656103203 0.299085846329477 1 {I|L}D 2 7 43.271 0.0 0.0 4.4723 0.0 0.0 0.0 736.394901719202 736.394901719202 5.172010956685362 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {I|L}D 4.4723 - 307 + 1 2.064 75547.5 1.0 4859 3555 8407 DOHH2_400M_050219_1,8416 DOHH2_400M_050219_1,8416,DLRIAHML False True DLRIAHML 47.461274 484.771166980267 2970798.0 8407.0 ENSG00000182378|ENST00000381657|PLCXD1;;ENST00000484611.7_1_X:200851-207455:+|nuORF 2.9990694920221963 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8417 47.469 458.0 346540.0 25 0 137360.0 + 20703 LLRSLLKPF 9 106 543.8534521857925 1085.692351438385 2 543.8533813357353 MULTI CID FTMS 0 0 0 8407 298820.8125 0.6555274881998737 -1 0.1460533142089843 10 Unmodified _LLRSLLKPF_ REV__nc|ENSG00000249471|Q6AW86-2|ZNF324B 2.302733041254933 0.8342969208511092 1 Y 1 -1 13.099 0.0 0.0 1.2065 0.0 0.0 904.6175356198288 0.0 904.6175356198288 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2065 - 22 + 1 2.064 121162.8 1.0 4860 3555 8407 DOHH2_400M_050219_1,8417 DOHH2_400M_050219_1,8417,LLRSLLKPF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8418 47.473 169.0 403620.0 25 0 37324.0 + 35315 SSSPVIFHV 9 103 486.7615259380656 971.5084989429312 2 486.7614318728447 MULTI CID FTMS 0 0 0 8407 254922.078125 1.0 0 0.0 11 Unmodified _SSSPVIFHV_ ENST00000357606.7_1_12:56221676-56222300:-|nuORF 34.18733598223924 0.1073653526364521 1 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PV{I|L}{M(Oxidation (M))|F}HV 8 3 + 37.529 0.0 0.0 3.863 3.863 83.273 0.0 0.0 0.0 21.4096967992576 5.930231180302101 5.930231180302101 15.094770665801349 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PV{I|L}{M(Oxidation (M))|F}HV;{I|L}{I|L}[C(Carbamidomethyl (C))K]VPDQ;{[CA]|SS}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VPDQ;{[TV]|[{I|L}S]}[WK]VPDQ;[VP]{I|L}{[ES]|[DT]|[{I|L}C]}[KG]DQ;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}K[KG]DQ;{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[KP]DQ 3.863;2.3092;2.3037;1.1124;0.69724;0.65014;0.37918 -;-;-;-;-;-;- 144 + 1 2.064 58481.9 1.0 4861 3555 8407 DOHH2_400M_050219_1,8418 DOHH2_400M_050219_1,8418,SSSPVIFHV True True SSSPVIFHV 47.472705 486.7624 1581064.5 8407.0 ENST00000357606.7_1_12:56221676-56222300:-|nuORF 6.826069672902425 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8419 47.479 360.0 377430.0 25 0 62840.0 + 45257 YSDFPFHEDY 10 125 660.2645889233916 1318.514624913583 2 660.2650634646416 MULTI CID FTMS 0 0 0 8407 204729.515625 0.5846610968971934 -2 0.26263427734375 12 Unmodified _YSDFPFHEDY_ ENSG00000076258|ENST00000367749|FMO4;ENST00000475780.5_1_1:171285408-171306524:+|nuORF 81.89019881105858 0.0155187237978306 1 YSD{M(Oxidation (M))|F}YVYM[MT] 10 6 + 79.971 0.0 0.0 6.0653 6.0653 79.995 0.0 0.0 0.0 32.30259828933836 0.2119920992932549 0.2119920992932549 2.015449934959719 0 0.5 2.0 1.9802046884880933 0.0 YSD{M(Oxidation (M))|F}YVYM[MT];YSD{M(Oxidation (M))|F}YVY{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};YSD{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V][MT]Y;YSD{M(Oxidation (M))|F}Y{[ET]|[MV]}[MT]Y;{[{M(Oxidation (M))|F}C]|[YS]}DYPYWYY;[MT]D{[QS]|[NT]}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}D[MT];{[{M(Oxidation (M))|F}H]|[RQ]}PED{M(Oxidation (M))|F}SDYY;Y[YG]Y{M(Oxidation (M))|F}PYD[MT];{[{M(Oxidation (M))|F}C]|[YS]}M{M(Oxidation (M))|F}P{M(Oxidation (M))|F}SDYY;{[{M(Oxidation (M))|F}H]|[RQ]}PEDYADYY 6.0653;5.9124;5.4126;5.3638;4.1241;3.8242;3.6888;3.6498;3.5951;3.5553 -;-;-;-;-;-;-;-;-;- 2137 + 1 2.064 105722.5 1.0 4862 3555 8407 DOHH2_400M_050219_1,8419 DOHH2_400M_050219_1,8419,YSDFPFHEDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8420 47.484 264.0 754330.0 25 0 82441.0 + 7023 EELDGLFRRY 10 111 433.2226920858016 1296.6462468576049 3 433.2228576540947 MULTI CID FTMS 0 0 0 8407 183199.6875 0.1746127559982729 -1 0.1460533142089843 13 Unmodified _EELDGLFRRY_ ENSG00000116604|ENST00000348159|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D 53.832793166522166 0.0576554960245129 1 EE{I|L}YD 5 7 66.302 0.0 0.0 5.1134 0.0 0.0 0.0 644.3650530266864 644.3650530266864 29.08174984724719 0.0 0.0 0.0 0 0.5283773187068795 1.2218487496163564 1.6861818737241734 0.0 EE{I|L}YD 5.1134 - 241 + 1 2.064 168970.7 1.0 4863 3555 8407 DOHH2_400M_050219_1,8420 DOHH2_400M_050219_1,8420,EELDGLFRRY True True EELDGLFRRY 47.484096 433.222857654095 6529698.5 8407.0 nc|ENSG00000116604|Q14814-4|MEF2D;;ENSG00000116604|ENST00000348159|MEF2D 6.722076892852783 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8421 47.494 570.0 521490.0 25 0 79812.0 + 25163 MSDSYLPSYY 10 165 613.257581731101 1224.500610529002 2 613.2578002810478 MULTI CID FTMS 0 0 0 8407 168359.09375 0.2901407972840083 -1 0.1460533142089843 14 Unmodified _MSDSYLPSYY_ ENSG00000198492|ENST00000373812|YTHDF2;nc|ENSG00000198492|Q9Y5A9-2|YTHDF2 56.17704186161178 0.0466144807663799 1 {I|L}PSYY 5 5 32.528 0.0 0.0 2.6565 0.0 0.0 583.1933312483897 0.0 583.1933312483897 0.0 9.617785448700417 0.0 0.0 0 0.8494850021680094 0.0 0.2887254899964357 0.0 + {I|L}PSYY 2.6565 + + 1797 + 1 2.064 216648.9 1.0 4864 3555 8407 DOHH2_400M_050219_1,8421 DOHH2_400M_050219_1,8421,MSDSYLPSYY True True MSDSYLPSYY 47.494101 613.257800281048 5219175.5 8407.0 nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;;ENSG00000198492|ENST00000373812|YTHDF2 7.192680358886719 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8422 47.498 203.0 309310.0 25 0 25313.0 + 31917 RTYDLYITY 9 72 604.3030045383425 1206.591456143485 2 604.3024169802666 MULTI CID FTMS 0 0 0 8407 170798.421875 0.7735942152576648 -1 0.1460533142089843 15 Unmodified _RTYDLYITY_ ENSG00000144848|ENST00000283290|ATG3;ENST00000467275.1_1_3:112256557-112257010:-|nuORF;ENST00000495756.5_1_3:112255248-112280627:-|nuORF;nc|ENSG00000144848|Q9NT62-2|ATG3 19.361941925380144 0.3125782356748823 1 [YT][RD]{I|L}Y{I|L}TY 9 2 + 60.34 0.0 0.0 5.0009 5.0009 79.546 0.0 0.0 0.0 4.771212547196626 16.478174818886373 4.771212547196626 4.771212547196626 0 0.9247425010840048 1.5228787452803376 0.0 0.0 [YT][RD]{I|L}Y{I|L}TY;{[QN]|[E{I|L}]|[KN]}K{[YD]|[{M(Oxidation (M))|F}M]}Y{I|L}TY;[{I|L}T][VG]{[YD]|[{M(Oxidation (M))|F}M]}Y{I|L}TY;[QP]G{I|L}Y{I|L}[RD][{M(Oxidation (M))|F}V];[QP]G{I|L}Y{[YD]|[{M(Oxidation (M))|F}M]}[VG][VP] 5.0009;4.6054;3.6963;2.3741;1.4686 -;-;-;-;- 105 1 2.064 50280.7 1.0 4865 3555 8407 DOHH2_400M_050219_1,8422 DOHH2_400M_050219_1,8422,RTYDLYITY False True RTYDLYITY 47.497978 604.302416980267 926103.6875 8407.0 ENSG00000144848|ENST00000283290|ATG3;;ENST00000467275.1_1_3:112256557-112257010:-|nuORF;;nc|ENSG00000144848|Q9NT62-2|ATG3;;ENST00000495756.5_1_3:112255248-112280627:-|nuORF 6.900178591410319 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8423 47.506 407.0 126590.0 25 0 8265.1 + -1 FFFYCLFCFVI 11 72 781.8657009443709 1561.7168489555418 2 781.8663207888603 MULTI CID FTMS 0 0 0 8407 166990.703125 1.0 0 0.0 16 2 Carbamidomethyl (C) _FFFYC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))FVI_ REV__ENSG00000164197|ENST00000389100|RNF180 3.5964929083625545 0.858179447565866 1 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQ[{I|L}V] 13 -1 + 62.427 0.0 0.0 3.9973 3.9973 76.972 0.0 0.0 0.0 5.898255349109505 7.513580737957071 5.898255349109505 5.898255349109505 0 0.0 1.3979400086720375 0.0 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQQNA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]{[QC]|[C(Carbamidomethyl (C))A]}WNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QGGA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]QNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}YC(Carbamidomethyl (C))NA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQ[AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQQNA{M(Oxidation (M))|F}Y[AG][{I|L}V] 3.9973;3.6197;3.4807;3.4164;3.4164;3.4164;3.4077;3.0851;3.0387;3.0387 -;-;-;-;-;-;-;-;-;- 865 1 2.064 39963.6 1.0 4866 3555 8407 DOHH2_400M_050219_1,8423 DOHH2_400M_050219_1,8423,FFFYCLFCFVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8424 47.515 477.0 239050.0 25 0 11517.0 + 2694 ATEEAPYWTY 10 127 615.7686462622385 1229.5227395912768 2 615.7695190310478 MULTI CID FTMS 0 0 0 8407 157326.828125 1.0 0 0.0 17 Unmodified _ATEEAPYWTY_ ENSG00000111666|ENST00000229266|CHPT1;ENST00000546490.1_1_12:102091639-102108044:+|nuORF;nc|ENSG00000111666|Q8WUD6-2|CHPT1 81.89019881105858 0.0155187237978306 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WAP{M(Oxidation (M))|F}WTY 9 4 + 43.343 0.0 0.0 3.5252 3.5252 69.803 0.0 0.0 0.0 5.973699858044419 7.16067799904571 5.973699858044419 0.9691001300805624 0 1.1237125054200234 1.5228787452803376 0.3054621874040891 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WAP{M(Oxidation (M))|F}WTY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AWP{M(Oxidation (M))|F}WTY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WT[DV]WTY;EEATAME[VS]TY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W[WE]WTY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WAP{M(Oxidation (M))|F}{[DA]|[EG]}TY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AWP{M(Oxidation (M))|F}{[DA]|[EG]}TY;EEATV[MT]WTY;EEATAMP{[MS]|[{M(Oxidation (M))|F}A]}TY;EEA{[RE]|[WV]}{M(Oxidation (M))|F}WTY 3.5252;3.4464;3.2143;3.0393;3.0211;2.7763;2.6974;2.6373;2.6037;2.5984 -;-;-;-;-;-;-;-;-;- 2589 1 2.064 86596.3 1.0 4867 3555 8407 DOHH2_400M_050219_1,8424 DOHH2_400M_050219_1,8424,ATEEAPYWTY True True ATEEAPYWTY 47.514894 615.769519031048 966498.875 8407.0 nc|ENSG00000111666|Q8WUD6-2|CHPT1;;ENSG00000111666|ENST00000229266|CHPT1;;ENST00000546490.1_1_12:102091639-102108044:+|nuORF 6.443196137746175 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8425 47.529 800.0 176900.0 25 0 8020.5 + + 8724 MNAAPGVDLTQL 12 149 623.3104869133895 1244.6064208935788 2 623.3100463747978 MULTI CID FTMS 0 0 0 8407 105192.671875 0.7281605828805447 -1 0.1460533142089843 18 Unmodified _EVLQDHYTQL_ ENSG00000186395|ENST00000269576|KRT10;P13645;P02535-1 22.736283301280096 0.4578556481593033 1 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AA[PG]VD{I|L}[WR] 11 -1 + 48.584 0.0 0.0 3.9036 3.9036 70.474 0.0 0.0 0.0 2.0645089932099268 5.862435673934279 2.0645089932099268 0.5551732784983088 0 0.7887254899964358 0.0 0.1505149978319906 1.4991348669726234 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AA[PG]VD{I|L}[WR];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AA[RP]D{I|L}[WR];{[MS]|[{M(Oxidation (M))|F}A]}NA[PG]VD{I|L}[WR];{[MS]|[{M(Oxidation (M))|F}A]}NA[RP]D{I|L}[WR];[QT]CA[PG]VD{I|L}[WR];[QT]CA[RP]D{I|L}[WR];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A[QP]VD{I|L}[WR];{[MS]|[{M(Oxidation (M))|F}A]}N[QP]VD{I|L}[WR];{[MS]|[{M(Oxidation (M))|F}A]}GGA[RP]D{I|L}[WR];[QT]C[QP]VD{I|L}[WR] 3.9036;3.859;3.7377;3.6931;3.5826;3.538;2.9735;2.8076;2.7364;2.6525 -;-;-;-;-;-;-;-;-;- 2519 1 2.064 107060.8 0.6200000047683716 4868 3555 8407 DOHH2_400M_050219_1,8425 DOHH2_400M_050219_1,8425,EVLQDHYTQL False False MNAAPGVDLTQL 47.528725 623.310046374798 687712.3125 8407.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 7.553354740142822 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8426 47.537 462.0 182330.0 25 0 21901.0 43388 WQQALTGLL 9 131 515.2883597888108 1028.5621666444215 2 515.2887451052666 MULTI CID FTMS 0 0 0 8407 99168.0859375 0.9127987851128868 1 -0.1135406494140625 19 Unmodified _WQQALTGLL_ ENSG00000168268|ENST00000422318|NT5DC2;ENST00000469616.1_1_3:52558942-52559071:-|nuORF;nc|ENSG00000168268|Q9H857-3|NT5DC2;nc|ENSG00000168268|Q9H857-4|NT5DC2;nc|ENSG00000168268|Q9H857|NT5DC2 12.531546534597751 0.4974689918368763 1 Y 1 9 12.764 0.0 0.0 1.241 0.0 0.0 847.4876254840684 0.0 847.4876254840684 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.241 - 53 + 1 2.064 66846.5 1.0 4869 3555 8407 DOHH2_400M_050219_1,8426 DOHH2_400M_050219_1,8426,WQQALTGLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8427 47.552 800.0 152080.0 25 0 16741.0 + -1 FKMQQKTILI 10 144 422.58195422866703 1264.7240332862011 3 422.5818359255791 MULTI CID FTMS 0 0 0 8407 94106.9921875 0.4698969290135737 -2 0.26263427734375 20 Oxidation (M) _FKM(Oxidation (M))QQKTILI_ REV__nc|ENSG00000152061|Q5R372-2|RABGAP1L 1.9063754702782607 0.7178183895776981 1 {I|L} 1 -1 10.0 0.0 0.0 0.79069 0.0 0.0 1133.6289232781917 0.0 1133.6289232781917 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.79069 + + 20 + 1 2.064 101238.4 0.4099999964237213 4870 3555 8407 DOHH2_400M_050219_1,8427 DOHH2_400M_050219_1,8427,FKMQQKTILI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8429 47.559 251.0 202340.0 25 0 19339.0 + 33086 SERSKGRKLD 10 83 588.3282680859372 0 588.3273803591728 PEAK CID FTMS 0 0 0 8428 91559.5234375 0.4591046666529296 1 -0.1649208068847656 1 Unmodified _SERSKGRKLD_ REV__ENSG00000054118|ENST00000354618|THRAP3 6.2057823575117 0.3961065659209838 1 MST 3 -1 14.693 0.0 0.0 1.2508 0.0 0.0 300.2076006637614 552.2904757135374 852.4980763772987 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MST 1.2508 - 20 + 1 2.064 43856.6 1.0 4871 3556 8428 DOHH2_400M_050219_1,8429 DOHH2_400M_050219_1,8429,SERSKGRKLD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8430 47.573 800.0 207120.0 25 0 23391.0 32228 RVYQEIAIL 9 196 368.88552526478406 1103.6347463945522 3 368.8854247927666 MULTI CID FTMS 0 0 0 8428 67347.2109375 0.2552739795961879 2 -0.3018569946289062 2 Unmodified _RVYQEIAIL_ ENSG00000004660|ENST00000348335|CAMKK1;ENST00000573483.1_1_17:3785816-3788993:-|nuORF;nc|ENSG00000004660|Q8N5S9-2|CAMKK1 17.11289562659939 0.3734572693229295 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][C(Carbamidomethyl (C))R]{I|L}{I|L}{I|L} 9 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][C(Carbamidomethyl (C))R]{I|L}{I|L} + + 14.604 -8.0406 -0.82676 1.3233 1.3233 48.423 0.0 0.0 0.0 0.0 -5.037144051603093 -5.037144051603093 0.0 0 0.0 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][C(Carbamidomethyl (C))R]{I|L}{I|L}{I|L} 1.3233 - 97 + 1 2.064 128323.3 0.959999978542328 4872 3556 8428 DOHH2_400M_050219_1,8430 DOHH2_400M_050219_1,8430,RVYQEIAIL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8431 47.574 60.0 1142900.0 25 0 131320.0 + 26333 NSDVSLLNY 9 101 512.7509891965976 1023.4874254599952 2 512.7512084841728 MULTI CID FTMS 0 0 0 8428 1053790.25 1.0 0 0.0 3 Unmodified _NSDVSLLNY_ ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1 53.832793166522166 0.0319663582346103 1 [NS]DVS{I|L} 6 3 37.951 0.0 0.0 3.708 0.0 0.0 0.0 405.17740283720144 405.17740283720144 12.14409273904008 0.0 0.0 0.0 0 0.0 1.0 1.3764613514953894 0.3807196863200844 + [NS]DVS{I|L} 3.708 + + 221 1 2.064 57200.2 1.0 4873 3556 8428 DOHH2_400M_050219_1,8431 DOHH2_400M_050219_1,8431,NSDVSLLNY True True NSDVSLLNY 47.574458 512.751208484173 16305988.0 8428.0 nc|ENSG00000163349|Q86Z02-3|HIPK1;;nc|ENSG00000163349|Q86Z02-4|HIPK1;;ENSG00000163349|ENST00000426820|HIPK1;;nc|ENSG00000163349|Q86Z02-2|HIPK1 5.255711873372396 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8432 47.576 68.0 1338500.0 25 0 224610.0 + 7024 EELDGLFRRY 10 71 649.329921184654 1296.645289436108 2 649.3307983279228 MULTI CID FTMS 0 0 0 8428 648738.0625 1.0 0 0.0 4 Unmodified _EELDGLFRRY_ ENSG00000116604|ENST00000348159|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D 38.17557092003332 0.1768326257063233 1 EE{NN|[MP]|[D{I|L}]|[EV]}Y 5 5 43.684 0.0 0.0 3.369 0.0 0.0 0.0 644.3647925147761 644.3647925147761 21.945830421822663 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.4247425010840047 EE{NN|[MP]|[D{I|L}]|[EV]}Y 3.369 - 33 + 1 2.064 74917.8 1.0 4874 3556 8428 DOHH2_400M_050219_1,8432 DOHH2_400M_050219_1,8432,EELDGLFRRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8433 47.579 123.0 501150.0 25 0 50685.0 + 7161 EENTNILKF 9 93 554.287960707768 1106.561368482336 2 554.2880126833916 MULTI CID FTMS 0 0 0 8428 488415.375 1.0 0 0.0 5 Unmodified _EENTNILKF_ ENSG00000138594|ENST00000308580|TMOD3 62.57269311338072 0.0246576765497938 1 EENTN{I|L}{I|L}K{M(Oxidation (M))|F} 9 0 + 70.345 0.0 0.0 6.3571 6.3571 86.716 0.0 0.0 0.0 22.37643016799588 7.269987279362624 7.269987279362624 7.269987279362624 0 0.5752574989159953 1.5228787452803376 0.0 0.7302046884880937 + + EENTN{I|L}{I|L}K{M(Oxidation (M))|F};EENTN{I|L}{I|L}{M(Oxidation (M))|F}K;EENTGG{I|L}{I|L}K{M(Oxidation (M))|F};EEGGTN{I|L}{I|L}K{M(Oxidation (M))|F};EENTGG{I|L}{I|L}{M(Oxidation (M))|F}K;EEGGTN{I|L}{I|L}{M(Oxidation (M))|F}K;EEGGTGG{I|L}{I|L}K{M(Oxidation (M))|F};EEGGTGG{I|L}{I|L}{M(Oxidation (M))|F}K;EE[RH][YV]K{M(Oxidation (M))|F};EE[RH][YV]{M(Oxidation (M))|F}K 6.3571;5.7001;5.5249;5.5249;4.8679;4.8679;4.6967;4.0397;2.7919;2.1349 +;-;-;-;-;-;-;-;-;- + 381 + 1 2.064 52846.7 1.0 4875 3556 8428 DOHH2_400M_050219_1,8433 DOHH2_400M_050219_1,8433,EENTNILKF True True EENTNILKF 47.578648 554.288012683392 2967209.0 8428.0 ENSG00000138594|ENST00000308580|TMOD3 7.901060104370117 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8434 47.581 98.0 701870.0 25 0 105480.0 + 43638 YALSKRRTQP 10 79 610.348398370542 1218.682243807884 2 610.3488647341728 MULTI CID FTMS 0 0 0 8428 441969.03125 0.957962585634404 1 -0.1649208068847656 6 Unmodified _YALSKRRTQP_ REV__ENST00000285689.7_2_5:125759302-125805397:+|nuORF;REV__ENST00000544396.5_2_5:125759302-125807964:+|nuORF;REV__nc|ENSG00000155324|Q96HH9-2|GRAMD2B 1.6526216038709556 0.7189921496796233 1 {I|L} 1 -1 9.9148 0.0 0.0 0.81357 0.0 0.0 1087.586523448312 0.0 1087.586523448312 0.0 9.914833303506096 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.81357 + + 3 + 1 2.064 56594.6 1.0 4876 3556 8428 DOHH2_400M_050219_1,8434 DOHH2_400M_050219_1,8434,YALSKRRTQP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8435 47.584 140.0 386270.0 25 0 64222.0 + 888 AEWDQVTVY 9 73 555.7578875789306 1109.5012222246612 2 555.7588378787041 MULTI CID FTMS 0 0 0 8428 389307.59375 1.0 0 0.0 7 Unmodified _AEWDQVTVY_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-3|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 19.256988751693697 0.3154191944385105 1 [WD]Q{[CP]|[EA]}VTVY 9 4 [WD]Q{[CP]|[EA]}VT + + 17.959 22.848 2.7549 1.6186 1.6186 48.612 0.0 0.0 0.0 0.0 -9.651049597579732 -9.651049597579732 0.0 0 0.0 0.0 0.0 0.0 [WD]Q{[CP]|[EA]}VTVY 1.6186 - 130 + 1 2.064 47627.0 1.0 4877 3556 8428 DOHH2_400M_050219_1,8435 DOHH2_400M_050219_1,8435,AEWDQVTVY False True AEWDQVTVY 47.583615 555.7584 2392085.25 8428.0 ENSG00000001497|ENST00000374811|LAS1L;;nc|ENSG00000001497|Q9Y4W2-3|LAS1L;;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 6.534611860911052 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8436 47.588 212.0 354680.0 25 0 43430.0 + 16612 KEEQVIQVW 9 106 579.8111442529021 1157.607735572604 2 579.8115112185478 MULTI CID FTMS 0 0 0 8428 286343.5 1.0 0 0.0 8 Unmodified _KEEQVIQVW_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 47.594388314883695 0.0456443387682827 1 {[QV]|[N{I|L}]|[RA]|[KV]}WTV{I|L}QV{[DA]|[EG]} 10 5 + 71.828 0.0 0.0 6.2049 6.2049 80.773 0.0 0.0 0.0 3.990019648939736 2.218487496163561 2.218487496163561 2.218487496163561 0 0.9247425010840048 1.154901959985743 0.7742275032520141 1.555462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}WTV{I|L}QV{[DA]|[EG]};{[QV]|[N{I|L}]|[RA]|[KV]}E{[SA]|[TG]}V{I|L}QVW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EQV{I|L}QVW;[R{M(Oxidation (M))|F}]Q{I|L}V[NP]VW;{[QV]|[N{I|L}]|[RA]|[KV]}WTV{I|L}[AG]V{[DA]|[EG]};[Q{I|L}]D{[SA]|[TG]}V{I|L}QVW;{[QV]|[N{I|L}]|[RA]|[KV]}E{[SA]|[TG]}V{I|L}[AG]VW;{[ES]|[DT]|[{I|L}C]}{[VA]|[{I|L}G]}QV{I|L}QVW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EQV{I|L}[AG]VW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[AG]V{I|L}QVW 6.2049;6.0132;5.8602;5.7082;5.4132;5.374;5.2215;5.1201;5.0647;5.0647 -;-;+;-;-;-;-;-;-;- + 474 1 2.064 63091.2 1.0 4878 3556 8428 DOHH2_400M_050219_1,8436 DOHH2_400M_050219_1,8436,KEEQVIQVW True True KEEQVIQVW 47.587642 579.811511218548 2223044.0 8428.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 6.251437981923421 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8437 47.601 800.0 121490.0 25 0 36025.0 31799 RSSLPRRRRVV 11 104 691.434939020415 1380.8553251076298 2 691.4346801638603 MULTI CID FTMS 0 0 0 8428 220466.59375 1.0 0 0.0 9 Unmodified _RSSLPRRRRVV_ ENST00000368804.5_1_1:152079991-152080243:-|nuORF 1.1933415558491238 0.8695176722560516 1 Y 1 11 12.218 0.0 0.0 0.88485 0.0 0.0 1199.7808907588 0.0 1199.7808907588 0.0 2.6855959219747394 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.88485 - 50 + 1 2.064 78006.4 0.8500000238418579 4879 3556 8428 DOHH2_400M_050219_1,8437 DOHH2_400M_050219_1,8437,RSSLPRRRRVV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8438 47.606 263.0 328660.0 25 0 37501.0 36956 TFAEKLSKA 9 96 497.78192357346575 993.5492942137316 2 497.7817260622978 MULTI CID FTMS 0 0 0 8428 173965.53125 1.0 0 0.0 10 Unmodified _TFAEKLSKA_ nc|ENSG00000060237|Q9H4A3-5|WNK1 22.736283301280096 0.2418982879461534 1 [TA]{M(Oxidation (M))|F}{I|L}GS{I|L}TGK 10 7 + 68.203 0.0 0.0 6.8646 6.8646 95.89 0.0 0.0 0.0 53.308291066564585 8.071968632008435 8.071968632008435 68.20284096449846 0 0.805462187404089 1.6989700043360187 0.5356668758921829 0.0 [TA]{M(Oxidation (M))|F}{I|L}GS{I|L}TGK 6.8646 - 90 + 1 2.064 70088.6 1.0 4880 3556 8428 DOHH2_400M_050219_1,8438 DOHH2_400M_050219_1,8438,TFAEKLSKA False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8439 47.611 232.0 312240.0 25 0 18741.0 + 38129 TPMFREYSL 9 95 572.2790771845278 1142.5436014358554 2 572.2790405154228 MULTI CID FTMS 0 0 0 8428 178263.828125 1.0 0 0.0 11 Unmodified _TPMFREYSL_ ENSG00000182199|ENST00000328923|SHMT2;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 49.52724829834842 0.0414064571532091 1 TPM{M(Oxidation (M))|F}[KP][Y{M(Oxidation (M))|F}]{I|L} 9 3 + 65.652 0.0 0.0 5.7461 5.7461 83.413 0.0 0.0 0.0 14.114459258636812 6.077184142563468 6.077184142563468 6.077184142563468 0 1.1549471895720984 2.0 0.0 0.0 TPM{M(Oxidation (M))|F}[KP][Y{M(Oxidation (M))|F}]{I|L};TPM{M(Oxidation (M))|F}[KP]PYY;[TP]M[TA]YPYS{I|L};[TP]MP{[WN]|[YH]}PST{I|L};[TP]MP{[WN]|[YH]}PTS{I|L};[TP]MP[HT]PYS{I|L};[TP]M{[QN]|[E{I|L}]|[KN]}[HS]DT{I|L};[TP]M{[QN]|[E{I|L}]|[KN]}[HS]ES{I|L};[TP]M{[QN]|[E{I|L}]|[KN]}[HD]ST{I|L};[TP]M{[QN]|[E{I|L}]|[KN]}[HD]TS{I|L} 5.7461;5.2142;4.5108;4.4049;4.3166;4.3166;4.0566;3.9683;3.9025;3.8142 -;-;-;-;-;-;-;-;-;- 655 + 1 2.064 62149.1 1.0 4881 3556 8428 DOHH2_400M_050219_1,8439 DOHH2_400M_050219_1,8439,TPMFREYSL True True TPMFREYSL 47.610708 572.279040515423 1427372.375 8428.0 ENST00000553837.5_1_12:57625333-57628141:+|nuORF;;ENSG00000182199|ENST00000328923|SHMT2;;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;;nc|ENSG00000182199|P34897-2|SHMT2;;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;;nc|ENSG00000182199|P34897-3|SHMT2;;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 6.538372993469238 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8440 47.625 800.0 136610.0 25 0 16534.0 + 34412 SLVIGFKRL 9 147 516.8296150892397 1031.6446772452794 2 516.8300659060478 MULTI CID FTMS 0 0 0 8428 152533.59375 1.0 0 0.0 12 Unmodified _SLVIGFKRL_ REV__ENSG00000173821|ENST00000582970|RNF213;REV__ENST00000559070.5_1_17:78261823-78310301:+|nuORF;REV__nc|ENSG00000173821|Q63HN8-4|RNF213;REV__nc|ENSG00000173821|Q63HN8|RNF213 7.910154910731844 0.6385446671287552 1 {[TV]|[{I|L}S]}V[WQ]TVT 8 -1 29.307 0.0 0.0 2.8408 0.0 0.0 0.0 114.1290882162356 114.1290882162356 17.088512770331903 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.8494850021680094 0.0 {[TV]|[{I|L}S]}V[WQ]TVT 2.8408 - 403 1 2.064 87206.0 0.6200000047683716 4882 3556 8428 DOHH2_400M_050219_1,8440 DOHH2_400M_050219_1,8440,SLVIGFKRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8441 47.64 800.0 230250.0 25 0 58368.0 41363 VPKENSLIL 9 147 506.80589336342894 1011.597233793658 2 506.8056823611259 MULTI CID FTMS 0 0 0 8428 149810.5625 1.0 0 0.0 13 Unmodified _VPKENSLIL_ ENSG00000131652|ENST00000326266|THOC6;nc|ENSG00000131652|Q86W42-2|THOC6;nc|ENSG00000131652|Q86W42-3|THOC6 39.957323273325 0.0756908302845263 1 [{I|L}P]ENSVK{I|L}{I|L} 9 4 + 66.954 0.0 0.0 6.6186 6.6186 82.268 0.0 0.0 0.0 2.518119729938008 16.478174818886373 2.518119729938008 2.518119729938008 0 0.8494850021680094 1.3979400086720375 0.8778623208748889 0.6861818737241735 [{I|L}P]ENSVK{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}NPSVK{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}PNSVK{I|L}{I|L};[NP]E{I|L}SVK{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}SVK{I|L}{I|L};[NP]ES{I|L}VK{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}PGGSVK{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GGPSVK{I|L}{I|L};[{I|L}P]EGGSVK{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PS{I|L}VK{I|L}{I|L} 6.6186;6.3697;6.3697;6.1956;5.7928;5.5961;5.4595;5.4595;5.4064;5.1933 -;-;-;-;-;-;-;-;-;- 1435 1 2.064 143396.5 0.6000000238418579 4883 3556 8428 DOHH2_400M_050219_1,8441 DOHH2_400M_050219_1,8441,VPKENSLIL True True KVSPNELIL 47.639529 506.805682361126 735439.9375 8428.0 ENSG00000175390|ENST00000651655|EIF3F 1.4697452982266743 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8442 47.643 169.0 259350.0 25 0 15272.0 + 7309 EEVNYINTF 9 86 564.7641010948648 0 564.7642089724541 PEAK CID FTMS 0 0 0 8428 137302.4375 0.4670220929118941 -1 0.1135406494140625 14 Unmodified _EEVNYINTF_ ENSG00000175305|ENST00000308108|CCNE2;nc|ENSG00000175305|O96020-2|CCNE2 21.74664581756881 0.185237546287679 1 {M(Oxidation (M))|F} 1 8 9.732 0.0 0.0 0.86314 0.0 0.0 765.3538114653171 212.06867395572505 977.422485421042 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.86314 + + 78 + 1 2.064 38815.8 1.0 4884 3556 8428 DOHH2_400M_050219_1,8442 DOHH2_400M_050219_1,8442,EEVNYINTF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8443 47.653 589.0 171480.0 25 0 38912.0 + 7016 EEKSIDLIQKW 11 108 463.5854981746845 1387.7346651242535 3 463.5857116580009 MULTI CID FTMS 0 0 0 8428 112169.328125 1.0 0 0.0 15 Unmodified _EEKSIDLIQKW_ ENSG00000161217|ENST00000431016|PCYT1A 15.538449434065043 0.7119291465483839 1 {I|L}D 2 9 17.206 0.0 0.0 1.2399 0.0 0.0 591.3395368056973 565.2663668268186 1156.605903632516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 + {I|L}D 1.2399 + + 92 + 1 2.064 85777.2 1.0 4885 3556 8428 DOHH2_400M_050219_1,8443 DOHH2_400M_050219_1,8443,EEKSIDLIQKW False True EEKSIDLIQKW 47.653129 463.585711658001 573925.625 8428.0 ENSG00000161217|ENST00000431016|PCYT1A 5.8325395584106445 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8444 47.667 800.0 124710.0 25 0 12824.0 + 5359 DLISKMEKI 9 143 538.8058095386251 1075.59706614405 2 538.8060790896416 MULTI CID FTMS 0 0 0 8428 106648.125 1.0 0 0.0 16 Unmodified _DLISKMEKI_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3 45.739877483867886 0.0497104363764649 1 D{I|L}{I|L}SKMEK{I|L} 9 0 + 83.005 0.0 0.0 7.7171 7.7171 86.946 0.0 0.0 0.0 36.47817481888637 4.259687322722812 4.259687322722812 4.259687322722812 0 0.8494850021680094 2.0 0.75 0.0 + + D{I|L}{I|L}SKMEK{I|L};D{I|L}{I|L}SKME{I|L}K;D{I|L}{I|L}SK[YQ]P{I|L};{[TV]|[{I|L}S]}GMSK{I|L}D{I|L}{I|L};{[TV]|[{I|L}S]}GMS{I|L}KD{I|L}{I|L};{[TV]|[{I|L}S]}GMKS{I|L}D{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[VP]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}{I|L};[{I|L}T][DV]KMEK{I|L};[{I|L}T][WR]MEK{I|L};[{I|L}T][DV]KME{I|L}K 7.7171;7.3211;5.1377;3.5446;3.2647;2.8948;2.7531;2.3576;2.1989;1.9615 +;-;-;-;-;-;-;-;-;- + 895 + 1 2.064 80100.9 0.4799999892711639 4886 3556 8428 DOHH2_400M_050219_1,8444 DOHH2_400M_050219_1,8444,DLISKMEKI True True DLISKMEKI 47.666962 538.806079089642 712469.25 8428.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3 3.453030625979105 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8445 47.682 800.0 120080.0 25 0 23830.0 + 32040 RVKRQRQWTI 10 112 685.9087277988378 1369.8029026644756 2 685.9089233279228 MULTI CID FTMS 0 0 0 8428 93092.265625 0.2756956057269711 -2 0.2595939636230469 17 Unmodified _RVKRQRQWTI_ REV__ENST00000468532.5_1_22:51018168-51020803:-|nuORF;REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF 3.2813086475875832 0.7114585191678878 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MM 4 -1 26.242 0.0 0.0 1.9157 0.0 0.0 0.0 844.5706998659006 844.5706998659006 14.6479633912994 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MM 1.9157 - 46 1 2.064 85963.5 0.4799999892711639 4887 3556 8428 DOHH2_400M_050219_1,8445 DOHH2_400M_050219_1,8445,RVKRQRQWTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8446 47.688 330.0 242440.0 25 0 60530.0 20756 LLSTLFFLWLG 11 82 655.3823448852442 1308.7501368372882 2 655.3824340701103 MULTI CID FTMS 0 0 0 -1 0 18 Unmodified _LLSTLFFLWLG_ nc|ENSG00000080815|P49768-4|PSEN1 1.3295316138638542 0.8688751186870782 1 Y 1 11 10.713 0.0 0.0 0.81859 0.0 0.0 1127.6757177472475 0.0 1127.6757177472475 0.0 10.713337517843655 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.81859 - 2 + 1 2.064 79746.8 1.0 4888 3556 8428 DOHH2_400M_050219_1,8446 DOHH2_400M_050219_1,8446,LLSTLFFLWLG False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8447 47.702 800.0 114670.0 25 0 23329.0 + 1936 AMKKLLIIFSY 11 122 663.8958194908566 1325.7770860485132 2 663.8961669802666 MULTI CID FTMS 0 0 0 -1 0 19 Unmodified _AMKKLLIIFSY_ REV__ENSG00000188869|ENST00000359440|TMC3;REV__ENST00000559982.1_1_15:81630174-81666445:-|nuORF;REV__nc|ENSG00000188869|Q7Z5M5-2|TMC3 2.9952420565917617 0.861016188266951 1 Y 1 -1 13.495 0.0 0.0 1.0179 0.0 0.0 1144.7023312651131 0.0 1144.7023312651131 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0179 + + 88 + 1 2.064 81317.1 0.7699999809265137 4889 3556 8428 DOHH2_400M_050219_1,8447 DOHH2_400M_050219_1,8447,AMKKLLIIFSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8448 47.717 800.0 67158.0 25 0 6555.6 -1 0 83 1006.1405063979296 3015.3996897939883 3 1006.809741199017 MULTI CID FTMS 0 0 0 8428 173418.84375 1.0 0 0.0 20 1 [NP]{I|L}T[WP]{I|L} 7 -1 16.298 0.0 0.0 0.5405 0.0 0.0 0.0 2190.940192073538 2190.940192073538 9.114459258636812 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3494850021680094 [NP]{I|L}T[WP]{I|L} 0.5405 - 314 1 2.064 43340.4 0.6899999976158142 4890 3556 8428 DOHH2_400M_050219_1,8448 DOHH2_400M_050219_1,8448, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8450 47.722 40.0 1038900.0 25 0 237990.0 -1 MVIFLIIP 8 50 494.3009734339386 986.5873939346772 2 494.3011352419853 MULTI CID FTMS 0 0 0 8449 1151969.125 0.4020696058032904 1 -0.1369361877441406 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MVIFLIIP_ ENST00000281172.9_1_12:15835827-15835881:-|nuORF 0.0 0.8243325171867699 1 {I|L} 1 -1 11.783 0.0 0.0 1.1943 0.0 0.0 855.4922534090898 0.0 855.4922534090898 0.0 9.793036574208871 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1943 + + 2 + 1 2.065 37817.5 1.0 4891 3557 8449 DOHH2_400M_050219_1,8450 DOHH2_400M_050219_1,8450,MVIFLIIP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8451 47.724 74.0 503150.0 25 0 64385.0 + 26141 WSDGHLIYY 9 72 577.2692372310403 1152.5239215288805 2 577.2696411013603 MULTI CID FTMS 0 0 0 8449 362125.65625 0.1162037211597086 2 -0.2794723510742187 2 Unmodified _NPSPYHLYY_ nc|ENSG00000115762|Q96CS7-5|PLEKHB2;nc|ENSG00000115762|Q96CS7-2|PLEKHB2;nc|ENSG00000115762|Q96CS7-3|PLEKHB2;nc|ENSG00000115762|Q96CS7-6|PLEKHB2;nc|ENSG00000115762|Q96CS7-4|PLEKHB2;ENSG00000115762|ENST00000693505|PLEKHB2 15.847184025352805 0.4077185912009129 1 DS{I|L}WYY 6 6 33.148 0.0 0.0 2.8762 0.0 0.0 307.16511733222814 0.0 307.16511733222814 0.0 18.54425638516595 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 DS{I|L}WYY 2.8762 - 91 1 2.065 37131.2 1.0 4892 3557 8449 DOHH2_400M_050219_1,8451 DOHH2_400M_050219_1,8451,NPSPYHLYY False False WSDGHLIYY 47.723574 577.26964110136 41593820.0 8449.0 nc|ENSG00000115762|Q96CS7-5|PLEKHB2;;nc|ENSG00000115762|Q96CS7-2|PLEKHB2;;nc|ENSG00000115762|Q96CS7-3|PLEKHB2;;nc|ENSG00000115762|Q96CS7-6|PLEKHB2;;nc|ENSG00000115762|Q96CS7-4|PLEKHB2;;ENSG00000115762|ENST00000693505|PLEKHB2 7.732593695322673 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8452 47.725 28.0 1395600.0 25 0 361620.0 + 22468 LPVHINKGQFL 11 50 633.3693617495003 1264.7241705658005 2 633.3696166872978 MULTI CID FTMS 0 0 0 8449 1900928.625 0.8431367928817245 1 -0.1369361877441406 3 Unmodified _LPVHINKGQFL_ REV__ENSG00000188906|ENST00000298910|LRRK2 1.1933415558491238 0.8695176722560516 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.065 37121.9 1.0 4893 3557 8449 DOHH2_400M_050219_1,8452 DOHH2_400M_050219_1,8452,LPVHINKGQFL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8453 47.727 86.0 651440.0 25 0 134460.0 + 43392 WQRPQKRKR 9 65 641.8826648067551 1281.75077668031 2 641.8827392458916 MULTI CID FTMS 0 0 0 8449 810303.3125 0.6646449576585859 1 -0.1369361877441406 4 Unmodified _WQRPQKRKR_ REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF 0.6014990680409731 0.8936861360942873 1 Y 1 -1 10.596 0.0 0.0 0.82668 0.0 0.0 1100.6771510473006 0.0 1100.6771510473006 0.0 0.5959320385960432 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.82668 - 11 + 1 2.065 50708.1 1.0 4894 3557 8449 DOHH2_400M_050219_1,8453 DOHH2_400M_050219_1,8453,WQRPQKRKR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8454 47.728 57.0 569970.0 25 0 39142.0 + 29999 QTETGTPYMLY 11 50 652.2972301501162 1302.5799073670323 2 652.2977172732353 MULTI CID FTMS 0 0 0 8449 796689.4375 1.0 0 0.0 5 Unmodified _QTETGTPYMLY_ ENSG00000167325|ENST00000300738|RRM1 33.4449034751529 0.3133739643825231 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[EP]PYM{I|L}Y 10 5 + 65.054 0.0 0.0 4.9943 4.9943 80.576 0.0 0.0 0.0 6.020599913279625 8.947340481202062 6.020599913279625 6.020599913279625 0 0.8182503180159344 1.6989700043360187 1.924742501084005 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[EP]PYM{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[EP]PYM{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[HA]PYM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[EP]{[QN]|[E{I|L}]|[KN]}M{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[EP]{[QN]|[E{I|L}]|[KN]}M{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MYYYQ{[QN]|[E{I|L}]|[KN]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MYYY[AG]{[QN]|[E{I|L}]|[KN]} 4.9943;4.5321;3.449;3.0867;2.6245;2.3292;1.6223 -;-;-;-;-;-;- 173 1 2.065 34541.8 1.0 4895 3557 8449 DOHH2_400M_050219_1,8454 DOHH2_400M_050219_1,8454,QTETGTPYMLY False True QTETGTPYMLY 47.728124 652.297717273235 12788677.0 8449.0 ENSG00000167325|ENST00000300738|RRM1 3.873336315155029 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8455 47.73 78.0 1024000.0 25 0 94380.0 + + 24123 EGYGRYLDL 9 93 542.7685273194684 1083.5225017057369 2 543.2671386599541 MULTI CID FTMS 0 0 0 8449 699825.375 0.3233134850167443 5 -0.5984535217285156 6 Unmodified _LYNFETANL_ ENST00000446317.1_1_20:3471092-3471287:-|nuORF;ENST00000470585.5_1_1:38445118-38455637:-|nuORF;ENSG00000183431|ENST00000373019|SF3A3 15.847184025352805 0.4077185912009129 1 {NN|[MP]|[D{I|L}]|[EV]}[YR]GC{I|L}D 8 -1 35.908 0.0 0.0 3.314 0.0 0.0 0.0 145.08588946222054 145.08588946222054 9.277034080690356 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}[YR]GC{I|L}D 3.314 - 364 1 2.065 67935.9 1.0 4896 3557 8449 DOHH2_400M_050219_1,8455 DOHH2_400M_050219_1,8455,LYNFETANL False False EGYGRYLDL 47.729931 543.267138659954 4675281.5 8449.0 ENST00000446317.1_1_20:3471092-3471287:-|nuORF;;ENST00000470585.5_1_1:38445118-38455637:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 4.291849613189697 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8456 47.732 111.0 491790.0 25 0 118740.0 -1 IKDMKLLK 8 61 502.8141491300764 1003.6137453269528 2 502.8142578005791 MULTI CID FTMS 0 0 0 8449 519961.40625 0.2448436139574986 1 -0.1369361877441406 7 Oxidation (M) _IKDM(Oxidation (M))KLLK_ ENSG00000070540|ENST00000262139|WIPI1;ENST00000586815.1_1_17:66429656-66453562:-|nuORF;ENST00000589459.5_1_17:66423364-66453609:-|nuORF;nc|ENSG00000070540|Q5MNZ9-2|WIPI1 0.6903765706972694 0.8201419426409876 1 {I|L} 1 -1 11.259 0.0 0.0 1.1219 0.0 0.0 872.5186963540997 0.0 872.5186963540997 0.0 10.289959734888434 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1219 + + 2 + 1 2.065 48871.9 1.0 4897 3557 8449 DOHH2_400M_050219_1,8456 DOHH2_400M_050219_1,8456,IKDMKLLK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8457 47.735 114.0 323340.0 25 0 93231.0 19775 LGRPRQARWTL 11 60 677.3957656925392 1352.7769784518782 2 677.3959838747978 MULTI CID FTMS 0 0 0 8449 446571.21875 0.7439066695943429 -1 0.1649208068847656 8 Unmodified _LGRPRQARWTL_ ENSG00000176087|ENST00000323146|SLC35A4 1.0714618166137932 0.8700927088084459 1 Y 1 11 11.42 0.0 0.0 0.84419 0.0 0.0 1171.7026051382047 0.0 1171.7026051382047 0.0 6.815889512064128 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.84419 - 7 + 1 2.065 40346.5 1.0 4898 3557 8449 DOHH2_400M_050219_1,8457 DOHH2_400M_050219_1,8457,LGRPRQARWTL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8458 47.74 306.0 287330.0 25 0 40100.0 + 20313 LLERVAAW 8 112 479.2773507726912 956.5401486121824 2 479.2778198122978 MULTI CID FTMS 0 0 0 8449 280658.5625 1.0 0 0.0 9 Unmodified _LLERVAAW_ REV__ENSG00000127399|ENST00000359623|LRRC61 2.889219685676258 0.8067950007271085 1 {I|L} 1 -1 10.278 0.0 0.0 1.0745 0.0 0.0 825.4451454156964 0.0 825.4451454156964 0.0 9.793036574208871 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0745 + + 9 + 1 2.065 75127.0 1.0 4899 3557 8449 DOHH2_400M_050219_1,8458 DOHH2_400M_050219_1,8458,LLERVAAW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8459 47.744 178.0 293350.0 25 0 59933.0 + 14660 IINSNPIEL 9 83 506.7870910195055 1011.559629105811 2 506.7870971560478 MULTI CID FTMS 0 0 0 8449 184079.40625 1.0 0 0.0 10 Unmodified _IINSNPIEL_ ENSG00000075568|ENST00000186436|TMEM131 49.93300154707207 0.0405168250806675 1 {I|L}{I|L}NSNP 6 3 35.947 0.0 0.0 3.5536 0.0 0.0 0.0 370.1960176158298 370.1960176158298 10.506937171672597 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.4247425010840047 0.3807196863200844 + {I|L}{I|L}NSNP 3.5536 + + 259 1 2.065 49518.9 1.0 4900 3557 8449 DOHH2_400M_050219_1,8459 DOHH2_400M_050219_1,8459,IINSNPIEL True True IINSNPIEL 47.743695 506.787097156048 1414435.5 8449.0 ENSG00000075568|ENST00000186436|TMEM131 3.5217570463816323 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8460 47.751 391.0 263440.0 25 0 26951.0 6865 EEEELASTPP 10 126 551.2516915625744 1100.4888301919486 2 551.2518188357353 MULTI CID FTMS 0 0 0 8449 164661.65625 0.7504546161484441 -1 0.1649208068847656 11 Unmodified _EEEELASTPP_ ENSG00000149136|ENST00000278412|SSRP1 30.63653989081413 0.2803493085145199 1 {[TV]|[{I|L}S]}EAA{I|L} 6 8 48.184 0.0 0.0 4.3784 0.0 0.0 0.0 513.1468861824361 513.1468861824361 31.19456889533673 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 2.086696871556164 0.0 {[TV]|[{I|L}S]}EAA{I|L} 4.3784 - 414 1 2.065 81790.7 1.0 4901 3557 8449 DOHH2_400M_050219_1,8460 DOHH2_400M_050219_1,8460,EEEELASTPP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8461 47.765 800.0 103190.0 25 0 34813.0 + 30392 RARPPREKARK 11 109 682.9217542313421 1363.828955529484 2 682.9217407107353 MULTI CID FTMS 0 0 0 8449 157078.65625 0.756949371078322 1 -0.1369361877441406 12 Unmodified _RARPPREKARK_ REV__ENSG00000177679|ENST00000611745|SRRM3;REV__nc|ENSG00000177679|A6NNA2|SRRM3 1.3295316138638542 0.8688751186870782 1 Y 1 -1 12.764 0.0 0.0 0.93591 0.0 0.0 1182.754689027334 0.0 1182.754689027334 0.0 3.1601160735270284 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.93591 - 58 + 1 2.065 64935.2 0.7099999785423279 4902 3557 8449 DOHH2_400M_050219_1,8461 DOHH2_400M_050219_1,8461,RARPPREKARK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8462 47.777 689.0 126980.0 25 0 24559.0 -1 SLHKGRRVKCL 11 111 451.9327497525827 1352.7764198579482 3 451.9323608279228 MULTI CID FTMS 0 0 0 8449 153864.46875 0.7647145205603704 -1 0.1649208068847656 13 Carbamidomethyl (C) _SLHKGRRVKC(Carbamidomethyl (C))L_ ENST00000575844.1_1_17:6939894-6940281:+|nuORF 0.5059551277355931 0.8727608062196215 1 {I|L} 1 -1 8.4949 0.0 0.0 0.62796 0.0 0.0 1221.6813098499388 0.0 1221.6813098499388 0.0 -0.0438696215375244 -0.0438696215375244 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.62796 + + 23 + 1 2.065 82323.1 1.0 4903 3557 8449 DOHH2_400M_050219_1,8462 DOHH2_400M_050219_1,8462,SLHKGRRVKCL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8463 47.79 800.0 214250.0 25 0 12449.0 -1 0 126 869.4240282436629 1736.8335035541256 2 869.9255859255791 MULTI CID FTMS 0 0 0 8449 151501.5 0.9467040944351416 -1 0.1649208068847656 14 1 {[QS]|[NT]}AGAGMTNYV{I|L}{I|L}[TP]{[QS]|[NT]} 17 -1 + 90.492 0.0 0.0 5.2102 5.2102 82.688 0.0 0.0 0.0 9.33561654977865 2.927512854573692 2.927512854573692 7.523307562697738 0 2.8935078169319297 0.8538719643217619 2.5114393726401687 1.0010912013506126 {[QS]|[NT]}AGAGMTNYV{I|L}{I|L}[TP]{[QS]|[NT]};{[QS]|[NT]}QAGMTNYV{I|L}{I|L}[TP]{[QS]|[NT]};[AG]SQAGMTNYV{I|L}{I|L}[TP]{[QS]|[NT]};[AG]SAGAGMTNYV{I|L}{I|L}[TP]{[QS]|[NT]};[QA]SGAGMTNYV{I|L}{I|L}[TP]{[QS]|[NT]};{[QS]|[NT]}AQGMTNYV{I|L}{I|L}[TP]{[QS]|[NT]};{[QS]|[NT]}AGQMTNYV{I|L}{I|L}[TP]{[QS]|[NT]};[AG]SAQGMTNYV{I|L}{I|L}[TP]{[QS]|[NT]};{[QS]|[NT]}AGMGATNYV{I|L}{I|L}[TP]{[QS]|[NT]};[AG]SAGQMTNYV{I|L}{I|L}[TP]{[QS]|[NT]} 5.2102;4.777;4.6727;4.5303;4.4182;4.2825;4.2332;4.1781;4.0407;3.9909 -;-;-;-;-;-;-;-;-;- 7809 1 2.065 115210.9 0.6800000071525574 4904 3557 8449 DOHH2_400M_050219_1,8463 DOHH2_400M_050219_1,8463, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8464 47.798 441.0 149680.0 25 0 15302.0 + 27471 PKGARRGA 8 112 406.7463735765657 811.4781942199313 2 406.7461120486259 MULTI CID FTMS 0 0 0 8449 125937.46875 1.0 0 0.0 15 Unmodified _PKGARRGA_ REV__ENST00000334350.6_1_16:56691630-56693012:+|nuORF 0.6903765706972694 0.8201419426409876 1 G 1 -1 9.7539 0.0 0.0 1.202 0.0 0.0 736.445355330086 0.0 736.445355330086 0.0 7.535422390485527 0.0 0.0 0 0.0 0.0 0.0 0.0 G 1.202 + + 12 + 1 2.065 55759.0 1.0 4905 3557 8449 DOHH2_400M_050219_1,8464 DOHH2_400M_050219_1,8464,PKGARRGA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8465 47.805 315.0 200170.0 25 0 18501.0 7276 EETPYLVKL 9 103 546.3023704848621 1090.590188036524 2 546.3033325076103 MULTI CID FTMS 0 0 0 8449 125109.3203125 1.0 0 0.0 16 Unmodified _EETPYLVKL_ ENSG00000107404|ENST00000378888|DVL1;nc|ENSG00000107404|O14640-2|DVL1 41.8396318013385 0.0653578398400075 1 EETPY{I|L}VK{I|L} 9 0 + 50.641 0.0 0.0 4.6434 4.6434 87.63 0.0 0.0 0.0 18.42210408783 10.908458057352185 10.908458057352185 32.44850021680094 0 0.75 1.2218487496163564 0.0 0.0 + + EETPY{I|L}VK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QA]Y{I|L}VK{I|L} 4.6434;1.6681 +;- + 91 + 1 2.065 56278.6 1.0 4906 3557 8449 DOHH2_400M_050219_1,8465 DOHH2_400M_050219_1,8465,EETPYLVKL True True EETPYLVKI 47.805418 546.30333250761 891206.4375 8449.0 ENST00000572285.5_1_17:7133284-7137536:-|nuORF;;ENST00000576949.1_1_17:7133875-7137617:-|nuORF;;ENSG00000004975|ENST00000005340|DVL2 4.902523835500081 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8466 47.819 800.0 140970.0 25 0 18116.0 + -1 ASEDATIKVWDY 12 149 699.3328664962776 1396.651180059355 2 699.3327514529228 MULTI CID FTMS 0 0 0 8449 114045.46875 1.0 0 0.0 17 Carbamidomethyl (C) _WLC(Carbamidomethyl (C))HLIMFMF_ ENSG00000007168|ENST00000397195|PAFAH1B1;ENST00000609078.1_1_17:2569342-2573633:+|nuORF 12.531546534597751 0.6372748319968624 1 {[ES]|[DT]|[{I|L}C]}ADAT{I|L}QVWDY 12 -1 + 80.516 0.0 0.0 5.765 5.765 81.082 0.0 0.0 0.0 3.5178619308686905 11.031442668825775 3.5178619308686905 3.5178619308686905 0 3.024227503252014 0.0 2.0356668758921828 0.0 {[ES]|[DT]|[{I|L}C]}ADAT{I|L}QVWDY;{[SA]|[TG]}EDAT{I|L}QV[VS]DY;{[DA]|[EG]}TDAT{I|L}QV[VS]DY;{[ES]|[DT]|[{I|L}C]}DAAT{I|L}QVWDY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SAAT{I|L}QVWDY;{[ES]|[DT]|[{I|L}C]}ADAT{I|L}[AG]VWDY;{[SA]|[TG]}EDAT{I|L}Q{I|L}[TA]DY;{[SA]|[TG]}EDAT{I|L}[AG]V[VS]DY;{[DA]|[EG]}TDAT{I|L}Q{I|L}[TA]DY;{[DA]|[EG]}TDAT{I|L}[AG]V[VS]DY 5.765;5.5131;5.3455;5.2134;5.1737;5.1135;4.9925;4.8635;4.8249;4.6959 -;-;-;-;-;-;-;-;-;- 2450 1 2.065 86637.5 0.550000011920929 4907 3557 8449 DOHH2_400M_050219_1,8466 DOHH2_400M_050219_1,8466,WLCHLIMFMF False False ASEDATIKVWDY 47.819249 699.332751452923 561452.0 8449.0 ENSG00000007168|ENST00000397195|PAFAH1B1;;ENST00000609078.1_1_17:2569342-2573633:+|nuORF 7.035383701324463 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8467 47.833 800.0 49216.0 25 0 2190.4 + 31797 RSRWNFPWQTV 11 84 738.8765725029294 1475.7385920726588 2 738.8755981326103 MULTI CID FTMS 0 0 0 8449 93054.765625 1.0 0 0.0 18 Unmodified _RSRWNFPWQTV_ REV__ENST00000262994.8_1_4:144258370-144336709:+|nuORF 10.150570793230772 0.8240029794358671 1 {[QV]|[N{I|L}]|[RA]|[KV]}R[W{M(Oxidation (M))|F}]{[WN]|[YH]}{I|L}QS{I|L} 11 -1 + 42.552 0.0 0.0 2.8835 2.8835 72.995 0.0 0.0 0.0 10.443617561735168 11.706492507534932 10.443617561735168 4.771212547196619 0 1.3569758080123702 0.8239087409443188 0.0 0.3252574989159953 {[QV]|[N{I|L}]|[RA]|[KV]}R[W{M(Oxidation (M))|F}]{[WN]|[YH]}{I|L}QS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}R[W{M(Oxidation (M))|F}][WQ]VQS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}RD[{I|L}V]C(Carbamidomethyl (C))C(Carbamidomethyl (C))VQS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}RD[VS][WC(Carbamidomethyl (C))]VQS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}RD[QA][W{M(Oxidation (M))|F}]VQS{I|L} 2.8835;2.5602;2.5202;2.4809;2.3872 -;-;-;-;- 195 1 2.065 37332.7 0.5099999904632568 4908 3557 8449 DOHH2_400M_050219_1,8467 DOHH2_400M_050219_1,8467,RSRWNFPWQTV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8468 47.84 309.0 290200.0 25 0 63363.0 9398 FITREFLKSL 10 63 627.3670401944846 1252.7195274557691 2 627.3674194216728 MULTI CID FTMS 0 0 0 8449 477240.15625 0.3819023802171687 1 -0.1369361877441406 19 Unmodified _FITREFLKSL_ ENSG00000186951|ENST00000407236|PPARA 9.38312468134398 0.6832340498775793 1 Y 1 10 12.474 0.0 0.0 0.99577 0.0 0.0 1071.64475741358 0.0 1071.64475741358 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.99577 - 10 + 1 2.065 75755.5 1.0 4909 3557 8449 DOHH2_400M_050219_1,8468 DOHH2_400M_050219_1,8468,FITREFLKSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8469 47.854 800.0 147750.0 25 0 6264.8 -1 0 84 1082.5212202324196 5407.569718829099 5 1083.122851550579 MULTI CID FTMS 0 0 0 8449 228486.828125 1.0 0 0.0 20 1 AAAAAA 6 -1 34.157 0.0 0.0 0.63165 0.0 0.0 112.06398358737064 4866.261684479515 4978.325668066886 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AAAAAA 0.63165 - 82 + 1 2.065 81497.3 0.75 4910 3557 8449 DOHH2_400M_050219_1,8469 DOHH2_400M_050219_1,8469, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8471 47.86 174.0 212270.0 25 0 18850.0 + 26334 NSDVSLLNY 9 87 512.7509891965976 1023.4874254599952 2 512.7512695193291 MULTI CID FTMS 0 0 0 8470 137511.515625 0.1304923020733965 2 -0.2510032653808594 1 Unmodified _NSDVSLLNY_ ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1 27.628801355627647 0.1796483985696185 1 [NS]DVP 5 5 28.235 0.0 0.0 2.7587 0.0 0.0 0.0 508.2319072317327 508.2319072317327 7.97442527029073 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.5774509799928715 0.0 [NS]DVP 2.7587 - 67 1 2.065 36558.1 1.0 4911 3558 8470 DOHH2_400M_050219_1,8471 DOHH2_400M_050219_1,8471,NSDVSLLNY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8472 47.863 187.0 262060.0 25 0 17774.0 45345 YSPFQCHICQ 10 74 613.257581731101 1224.500610529002 2 613.2579223513603 MULTI CID FTMS 0 0 0 8470 71874.2421875 0.1238641137106094 2 -0.2510032653808594 2 Unmodified _YSPFQCHICQ_ ENSG00000117000|ENST00000372771|RLF 6.723162845929126 0.6955379296933136 1 Y 1 9 13.979 0.0 0.0 1.1416 0.0 0.0 1043.4264355795865 0.0 1043.4264355795865 0.0 12.385606273598311 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1416 + + 37 + 1 2.065 44720.1 1.0 4912 3558 8470 DOHH2_400M_050219_1,8472 DOHH2_400M_050219_1,8472,YSPFQCHICQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8473 47.868 265.0 422010.0 25 0 52940.0 26319 NRPFLLLMAT 10 108 588.335371774823 1174.656190616446 2 588.3352538943291 MULTI CID FTMS 0 0 0 8470 310657.21875 0.7232380213212319 -1 0.1369361877441406 3 Unmodified _NRPFLLLMAT_ ENSG00000105329|ENST00000221930|TGFB1 6.2057823575117 0.6979311171683138 1 {M(Oxidation (M))|F} 1 9 11.783 0.0 0.0 1.0031 0.0 0.0 1009.5769192314834 0.0 1009.5769192314834 0.0 8.683792826127092 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0031 + + 20 + 1 2.065 88174.7 1.0 4913 3558 8470 DOHH2_400M_050219_1,8473 DOHH2_400M_050219_1,8473,NRPFLLLMAT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8474 47.872 182.0 376010.0 25 0 35054.0 + 42113 VRNPFTVTV 9 86 516.7954323072572 1031.5763116813143 2 516.7955200076103 MULTI CID FTMS 0 0 0 8470 274895.28125 0.7012724173777727 -1 0.1369361877441406 4 Unmodified _VRNPFTVTV_ ENSG00000236287|ENST00000413761|ZBED5 36.12702656103203 0.0967173616627612 1 {[TV]|[{I|L}S]}T[VG]RTV 8 6 39.486 0.0 0.0 3.8278 0.0 0.0 0.0 215.10310344525604 215.10310344525604 8.05970632012567 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.6861818737241735 0.0 {[TV]|[{I|L}S]}T[VG]RTV 3.8278 - 703 1 2.065 56974.4 1.0 4914 3558 8470 DOHH2_400M_050219_1,8474 DOHH2_400M_050219_1,8474,VRNPFTVTV True True VRNPFTVTV 47.871761 516.79552000761 7388384.0 8470.0 ENSG00000236287|ENST00000413761|ZBED5 7.206861654917399 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8475 47.875 135.0 513010.0 25 0 50121.0 + 538 AEIEDIRVL 9 90 529.297385596076 0 529.2976562380791 PEAK CID FTMS 0 0 0 8470 249336.765625 0.3477573273636589 -1 0.1369361877441406 5 Unmodified _AEIEDIRVL_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B 26.268140514670165 0.1442484609216422 1 {I|L}ED{I|L} 4 5 35.433 0.0 0.0 3.3536 0.0 0.0 200.0779649919255 383.2404574029906 583.3184223949162 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + {I|L}ED{I|L} 3.3536 + + 116 + 1 2.065 59937.9 1.0 4915 3558 8470 DOHH2_400M_050219_1,8475 DOHH2_400M_050219_1,8475,AEIEDIRVL False True AEIEDIRVL 47.8745 529.297656238079 4256282.5 8470.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 5.699561436971028 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8476 47.879 252.0 179680.0 25 0 16387.0 + + 20960 NLKIKWENL 9 84 579.3374349919702 1156.6603170507403 2 579.3380004763603 MULTI CID FTMS 0 0 0 8470 240568.4375 0.9015711873486146 1 -0.1425361633300781 6 Unmodified _LNKLLICNNL_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 41.8396318013385 0.1381409678234242 1 {[QV]|[N{I|L}]|[RA]|[KV]}K{I|L} 4 -1 49.253 0.0 0.0 4.2582 0.0 0.0 0.0 685.3326510065061 685.3326510065061 35.27310937020445 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}K{I|L} 4.2582 + + 93 + 1 2.065 39800.6 1.0 4916 3558 8470 DOHH2_400M_050219_1,8476 DOHH2_400M_050219_1,8476,LNKLLICNNL False False NLKIKWENL 47.879197 579.33800047636 2079202.875 8470.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 3.423353354136149 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8477 47.883 213.0 272390.0 25 0 55020.0 + 45258 YSDFPFHEDY 10 71 660.2645889233916 1318.514624913583 2 660.2650634646416 MULTI CID FTMS 0 0 0 8470 229712.84375 0.6560078198214053 1 -0.1425361633300781 7 Unmodified _YSDFPFHEDY_ ENSG00000076258|ENST00000367749|FMO4;ENST00000475780.5_1_1:171285408-171306524:+|nuORF 56.17704186161178 0.0466144807663799 1 YSD{M(Oxidation (M))|F}P{M(Oxidation (M))|F}{[QS]|[NT]}D 9 3 71.164 0.0 0.0 5.3973 0.0 0.0 0.0 229.0624025934204 229.0624025934204 36.03794667124717 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 YSD{M(Oxidation (M))|F}P{M(Oxidation (M))|F}{[QS]|[NT]}D 5.3973 - 510 + 1 2.065 46560.6 1.0 4917 3558 8470 DOHH2_400M_050219_1,8477 DOHH2_400M_050219_1,8477,YSDFPFHEDY True True YSDFPFHEDY 47.883257 660.265063464642 4760459.0 8470.0 ENSG00000076258|ENST00000367749|FMO4;;ENST00000475780.5_1_1:171285408-171306524:+|nuORF 12.080390294392904 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8478 47.887 218.0 268550.0 25 0 21012.0 + 23495 LTIRQFYKR 9 72 612.8618567000431 1223.709160466886 2 612.8616821169853 MULTI CID FTMS 0 0 0 8470 218612.3125 0.94463210952535 -1 0.1369361877441406 8 Unmodified _LTIRQFYKR_ REV__ENSG00000120235|ENST00000380210|IFNA6;REV__ENSG00000120242|ENST00000380205|IFNA8;REV__ENSG00000147873|ENST00000610521|IFNA5;REV__ENSG00000147885|ENST00000380216|IFNA16;REV__ENSG00000186803|ENST00000357374|IFNA10;REV__ENSG00000188379|ENST00000380206|IFNA2;REV__ENSG00000214042|ENST00000239347|IFNA7;REV__ENSG00000234829|ENST00000413767|IFNA17;REV__ENSG00000236637|ENST00000421715|IFNA4 6.723162845929126 0.6799819581413107 1 Y 1 -1 13.495 0.0 0.0 1.1028 0.0 0.0 1042.635138105361 0.0 1042.635138105361 0.0 11.27636252551653 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1028 + + 42 + 1 2.065 51326.0 1.0 4918 3558 8470 DOHH2_400M_050219_1,8478 DOHH2_400M_050219_1,8478,LTIRQFYKR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8479 47.895 426.0 178520.0 25 0 12409.0 + + 901 AEIPEGYVPEHW 12 95 713.8356069871891 1425.656661041178 2 714.3369628787041 MULTI CID FTMS 0 0 0 8470 153720.625 1.0 0 0.0 9 Unmodified _AEYEESRQTKW_ nc|ENSG00000136521|O43674-2|NDUFB5;ENST00000488002.5_1_3:179322588-179334847:+|nuORF;ENSG00000136521|ENST00000259037|NDUFB5;ENST00000359944.10_1_3:179322640-179341825:+|nuORF 5.296884461304476 0.8501568894076437 1 [EP]GYVH{M(Oxidation (M))|F}G 8 -1 30.532 0.0 0.0 2.1416 0.0 0.0 0.0 536.2350876839296 536.2350876839296 17.305711774629092 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [EP]GYVH{M(Oxidation (M))|F}G 2.1416 - 673 1 2.065 61164.6 1.0 4919 3558 8470 DOHH2_400M_050219_1,8479 DOHH2_400M_050219_1,8479,AEYEESRQTKW False False AEIPEGYVPEHW 47.89499 713.836 3629326.0 8470.0 nc|ENSG00000136521|O43674-2|NDUFB5;;ENST00000488002.5_1_3:179322588-179334847:+|nuORF;;ENSG00000136521|ENST00000259037|NDUFB5;;ENST00000359944.10_1_3:179322640-179341825:+|nuORF 8.811434745788574 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8480 47.909 800.0 135040.0 25 0 12450.0 + 29149 QFFNSKRLLL 10 132 422.58195422866703 1264.7240332862011 3 422.5819274783134 MULTI CID FTMS 0 0 0 8470 135635.234375 0.6772565844189686 1 -0.1425361633300781 10 Unmodified _QFFNSKRLLL_ REV__ENST00000523850.5_1_8:85618206-85717007:+|nuORF 1.4819007175156935 0.719781833666733 1 {I|L} 1 -1 9.6041 0.0 0.0 0.75938 0.0 0.0 1133.6291521600276 0.0 1133.6291521600276 0.0 0.8316571088326263 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.75938 + + 26 + 1 2.065 90198.6 0.5 4920 3558 8470 DOHH2_400M_050219_1,8480 DOHH2_400M_050219_1,8480,QFFNSKRLLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8481 47.923 800.0 98259.0 25 0 19877.0 39812 VETLRFLLQRL 11 110 694.422162388345 0 694.4224120974541 PEAK CID FTMS 0 0 0 8470 129749.5390625 1.0 0 0.0 11 Unmodified _VETLRFLLQRL_ ENSG00000059588|ENST00000040877|TARBP1 8.745405648335112 0.4618489994582195 1 T 1 10 5.7268 0.0 0.0 0.41294 0.0 0.0 1057.668700201471 225.08820520572505 1282.756905407196 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + T 0.41294 + + 41 + 1 2.065 64829.4 0.6700000166893005 4921 3558 8470 DOHH2_400M_050219_1,8481 DOHH2_400M_050219_1,8481,VETLRFLLQRL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8482 47.926 187.0 567870.0 25 0 137500.0 + + 10114 SREGRPIWQL 10 88 619.8696626611791 1237.724772389158 2 621.3755370974541 MULTI CID FTMS 0 0 0 8470 124547.1171875 0.3771917276350726 8 -0.9637069702148438 12 Unmodified _FPVRKLHTQL_ nc|ENSG00000113161|P04035-3|HMGCR;ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;ENST00000504466.1_1_5:74645886-74647190:+|nuORF 3.944395688203298 0.708391353636983 1 Y 1 -1 12.764 0.0 0.0 1.0313 0.0 0.0 1056.6506126985314 0.0 1056.6506126985314 0.0 5.774509799928715 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0313 - 94 + 1 2.065 80758.3 1.0 4922 3558 8470 DOHH2_400M_050219_1,8482 DOHH2_400M_050219_1,8482,FPVRKLHTQL False False SREGRPIWQL 47.926273 621.375537097454 6441310.5 8470.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR;;ENST00000504466.1_1_5:74645886-74647190:+|nuORF 5.727542400360107 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8483 47.942 800.0 247790.0 25 0 26262.0 + 18878 LASYEIKQKI 10 137 596.8487748478047 1191.6829967624094 2 596.8493530154228 MULTI CID FTMS 0 0 0 8470 116805.9609375 0.8081873988357817 -1 0.1369361877441406 13 Unmodified _LASYEIKQKI_ REV__ENSG00000174527|ENST00000310903|MYO1H;REV__nc|ENSG00000174527|Q8N1T3-2|MYO1H;REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H;REV__nc|ENSG00000174527|Q8N1T3|MYO1H 6.723162845929126 0.6955379296933136 1 Y 1 -1 13.099 0.0 0.0 1.0992 0.0 0.0 1010.6087912954156 0.0 1010.6087912954156 0.0 2.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0992 + + 61 + 1 2.065 145630.7 0.5400000214576721 4923 3558 8470 DOHH2_400M_050219_1,8483 DOHH2_400M_050219_1,8483,LASYEIKQKI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8484 47.955 800.0 114050.0 25 0 6189.7 + 45231 YRNAYTMVL 9 132 565.7867428432426 1129.558932753285 2 565.7867919802666 MULTI CID FTMS 0 0 0 8470 116950.9765625 1.0 0 0.0 14 Unmodified _YRNAYTMVL_ ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3 24.020572477871973 0.2255576514309169 1 T[YT]MV{I|L} 6 4 29.759 0.0 0.0 2.6346 0.0 0.0 403.18614394355626 0.0 403.18614394355626 0.0 12.452111198409934 0.0 0.0 0 0.3494850021680094 0.0 0.7134679910804405 0.0 T[YT]MV{I|L} 2.6346 - 221 1 2.065 73898.9 0.5199999809265137 4924 3558 8470 DOHH2_400M_050219_1,8484 DOHH2_400M_050219_1,8484,YRNAYTMVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8485 47.967 646.0 215150.0 25 0 45309.0 28374 PSLLADTLY 9 133 496.76898839019697 991.523423847194 2 496.7691528201103 MULTI CID FTMS 0 0 0 8470 110193.203125 1.0 0 0.0 15 Unmodified _PSLLADTLY_ ENST00000564436.5_1_16:732796-733478:-|nuORF;ENST00000568689.5_1_16:732830-733478:-|nuORF;ENST00000569441.5_1_16:732796-733478:-|nuORF 30.22481116460888 0.1466181017706357 1 [TA]D{I|L} 4 6 28.418 0.0 0.0 2.8661 0.0 0.0 0.0 588.3037788664603 588.3037788664603 3.953711200577416 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.6462566630072955 0.0 [TA]D{I|L} 2.8661 - 213 1 2.065 108122.5 1.0 4925 3558 8470 DOHH2_400M_050219_1,8485 DOHH2_400M_050219_1,8485,PSLLADTLY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8486 47.971 180.0 464540.0 25 0 28258.0 + 32979 SEMRFVQDL 9 98 562.7735921191078 1123.5326313050157 2 562.7744628787041 MULTI CID FTMS 0 0 0 8470 106597.4296875 0.2550223882639025 -1 0.1369361877441406 16 Unmodified _SEMRFVQDL_ ENSG00000167657|ENST00000545797|DAPK3;ENST00000595279.1_1_19:3959101-3961233:-|nuORF 47.594388314883695 0.0456443387682827 1 {NN|[MP]|[D{I|L}]|[EV]}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L} 9 3 + 76.921 0.0 0.0 6.8464 6.8464 90.459 0.0 0.0 0.0 10.003345876930652 16.478174818886373 10.003345876930652 9.208187539523747 0 0.9247425010840048 1.3979400086720375 0.0 0.6861818737241735 {NN|[MP]|[D{I|L}]|[EV]}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}V[AG]D{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L};{[MG]|[TS]}[PA]{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V[AG]D{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V[AG]D{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}E{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L};{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QVQD{I|L};{[ES]|[DT]|[{I|L}C]}{[WT]|[RM]}{M(Oxidation (M))|F}VQD{I|L} 6.8464;6.0268;6.0268;5.956;5.4995;5.2111;5.1365;5.1015;5.0208;4.775 -;-;-;-;-;-;-;-;-;+ + 544 1 2.065 68912.1 1.0 4926 3558 8470 DOHH2_400M_050219_1,8486 DOHH2_400M_050219_1,8486,SEMRFVQDL True True SEMRFVQDL 47.971335 562.774462878704 2046782.5 8470.0 ENST00000595279.1_1_19:3959101-3961233:-|nuORF;;ENSG00000167657|ENST00000545797|DAPK3 7.532122294108073 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8487 47.977 293.0 299560.0 25 0 29309.0 + 23074 LSLPAAWTW 9 112 522.7778488688579 0 522.7776977419853 PEAK CID FTMS 0 0 0 8470 90739.4296875 1.0 0 0.0 17 Unmodified _LSLPAAWTW_ ENST00000396331.5_1_19:55142013-55142525:+|nuORF;ENST00000493242.1_1_19:54784347-54784886:-|nuORF 15.847184025352805 0.2451986057151378 1 E{I|L}S{I|L}{I|L} 5 7 28.756 0.0 0.0 2.7556 0.0 0.0 131.0576986148656 354.1418551080688 485.1995537229344 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 E{I|L}S{I|L}{I|L} 2.7556 - 188 + 1 2.065 74237.3 1.0 4927 3558 8470 DOHH2_400M_050219_1,8487 DOHH2_400M_050219_1,8487,LSLPAAWTW False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8488 47.983 374.0 134740.0 25 0 12874.0 -1 YEMMAGQPPF 10 96 601.747749647121 1201.480946361042 2 601.7484008669853 MULTI CID FTMS 0 0 0 8470 95675.84375 1.0 0 0.0 18 2 Oxidation (M) _YEM(Oxidation (M))M(Oxidation (M))AGQPPF_ ENSG00000171132|ENST00000306156|PRKCE 7.289230182591677 0.6929195370588109 1 {I|L}Y 2 -1 17.959 0.0 0.0 1.4947 0.0 0.0 907.3229191405754 0.0 907.3229191405754 0.0 2.552725051033063 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y 1.4947 - 60 + 1 2.065 40648.8 1.0 4928 3558 8470 DOHH2_400M_050219_1,8488 DOHH2_400M_050219_1,8488,YEMMAGQPPF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8489 47.989 286.0 283770.0 25 0 22536.0 + 44587 YPFIRTGL 8 110 483.7736293749859 965.5327058167718 2 483.7740051150322 MULTI CID FTMS 0 0 0 8470 89044.5625 1.0 0 0.0 19 Unmodified _YPFIRTGL_ ENSG00000151240|ENST00000280886|DIP2C;nc|ENSG00000151240|Q9Y2E4-2|DIP2C 19.256988751693697 0.6264283240490721 1 YP{M(Oxidation (M))|F}{I|L}{[NV]|[RG]}T{I|L} 8 2 + 50.187 0.0 0.0 5.1979 5.1979 80.679 0.0 0.0 0.0 35.01016889216956 6.515318870489466 6.515318870489466 5.389180660303694 0 0.2614393726401688 1.3010299956639813 0.5 0.0 YP{M(Oxidation (M))|F}{I|L}{[NV]|[RG]}T{I|L};YP{M(Oxidation (M))|F}{I|L}[WK]{I|L};[{I|L}T]P{I|L}[YG][R{M(Oxidation (M))|F}] 5.1979;4.6397;0.83025 -;-;- 305 + 1 2.065 66419.4 1.0 4929 3558 8470 DOHH2_400M_050219_1,8489 DOHH2_400M_050219_1,8489,YPFIRTGL False True YPFIRTGL 47.988702 483.774005115032 685016.4375 8470.0 nc|ENSG00000151240|Q9Y2E4-2|DIP2C;;ENSG00000151240|ENST00000280886|DIP2C 2.4634862343470254 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8490 47.996 427.0 203210.0 25 0 18705.0 19506 LFLQGRQI 8 129 487.79095678193954 0 487.7910034060478 PEAK CID FTMS 0 0 0 8470 161479.53125 1.0 0 0.0 20 Unmodified _LFLQGRQI_ ENST00000286614.10_1_8:89058997-89068400:-|nuORF 22.4526382665184 0.3716165630859057 1 {M(Oxidation (M))|F}{I|L}VK{[CA]|SS}D 7 6 32.974 0.0 0.0 3.387 0.0 0.0 112.0740267457166 82.06686578922108 194.14089253493768 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.6203715150305281 {M(Oxidation (M))|F}{I|L}VK{[CA]|SS}D 3.387 - 128 + 1 2.065 68691.6 1.0 4930 3558 8470 DOHH2_400M_050219_1,8490 DOHH2_400M_050219_1,8490,LFLQGRQI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8492 48.001 65.0 639660.0 25 0 158700.0 + 19900 LHRNLKDELK 10 59 633.3693617495003 1264.7241705658005 2 633.3694946169853 MULTI CID FTMS 0 0 0 8491 663082.5625 0.2941032597486639 3 -0.3189811706542969 1 Unmodified _LHRNLKDELK_ REV__ENSG00000115216|ENST00000379852|NRBP1;REV__ENST00000460499.5_1_2:27659579-27664676:+|nuORF;REV__ENST00000486701.1_1_2:27663393-27664286:+|nuORF 0.4007161486938917 0.7247829448918255 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.065 38130.4 1.0 4931 3559 8491 DOHH2_400M_050219_1,8492 DOHH2_400M_050219_1,8492,LHRNLKDELK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8493 48.006 257.0 151240.0 25 0 7930.8 + 30000 QTETGTPYMLY 11 64 652.2972301501162 1302.5799073670323 2 652.2975952029228 MULTI CID FTMS 0 0 0 8491 178278.84375 0.2237745793510661 2 -0.2327041625976562 2 Unmodified _QTETGTPYMLY_ ENSG00000167325|ENST00000300738|RRM1 15.248480904072842 0.7179608125786238 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[EP]PY 7 8 35.45 0.0 0.0 2.7215 0.0 0.0 0.0 422.1714960723636 422.1714960723636 14.01818526217312 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[EP]PY 2.7215 - 93 1 2.065 37023.8 1.0 4932 3559 8491 DOHH2_400M_050219_1,8493 DOHH2_400M_050219_1,8493,QTETGTPYMLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8494 48.007 56.0 1207700.0 25 0 62082.0 + 35140 SREGRPIWQL 10 79 414.5632016456976 1240.6677755372928 3 414.5630370974541 MULTI CID FTMS 0 0 0 8491 744703.5625 1.0 0 0.0 3 Unmodified _SREGRPIWQL_ ENSG00000113161|ENST00000287936|HMGCR;ENST00000504466.1_1_5:74645886-74647190:+|nuORF;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 12.227587767072771 0.6423749648908568 1 WQ{I|L} 3 7 22.479 0.0 0.0 1.8119 0.0 0.0 795.4353239358095 0.0 795.4353239358095 0.0 11.510234424404686 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + WQ{I|L} 1.8119 + + 58 1 2.065 61455.7 1.0 4933 3559 8491 DOHH2_400M_050219_1,8494 DOHH2_400M_050219_1,8494,SREGRPIWQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8495 48.009 78.0 962420.0 25 0 140860.0 + 5381 DLKPRNIFL 9 84 558.3322653957862 1114.6499778583725 2 558.3331176638603 MULTI CID FTMS 0 0 0 8491 546496.125 0.3239401148143192 -1 0.1425361633300781 4 Unmodified _DLKPRNIFL_ ENSG00000086232|ENST00000199389|EIF2AK1;ENST00000481134.1_1_3:142170107-142170575:+|nuORF;nc|ENSG00000086232|Q9BQI3-2|EIF2AK1 34.40172386719151 0.1061884637610825 1 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}[NP]R{M(Oxidation (M))|F}{I|L} 9 3 {NN|[MP]|[D{I|L}]|[EV]} + + 37.184 21.734 9.5278 3.3359 3.3359 51.281 0.0 0.0 0.0 0.0 28.511744483784085 0.0 0.0 0 1.174742501084005 0.0 0.0 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}[NP]R{M(Oxidation (M))|F}{I|L} 3.3359 - 233 + 1 2.065 59230.4 1.0 4934 3559 8491 DOHH2_400M_050219_1,8495 DOHH2_400M_050219_1,8495,DLKPRNIFL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8496 48.012 132.0 239000.0 25 0 67552.0 + 10265 FQVKLLYRMR 10 53 677.3957656925392 1352.7769784518782 2 677.3954955935478 MULTI CID FTMS 0 0 0 8491 457966.4375 0.7628890376326135 1 -0.1084671020507812 5 Unmodified _FQVKLLYRMR_ REV__ENSG00000129484|ENST00000429687|PARP2;REV__nc|ENSG00000129484|Q9UGN5|PARP2 0.4007161486938917 0.7247829448918255 1 W 1 -1 0.83746 0.0 0.0 0.061906 0.0 0.0 1066.6356343130094 97.04100977115468 1163.676644084164 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.061906 - 6 + 1 2.065 34114.0 1.0 4935 3559 8491 DOHH2_400M_050219_1,8496 DOHH2_400M_050219_1,8496,FQVKLLYRMR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8497 48.014 120.0 565140.0 25 0 93082.0 + 30320 RADQELLLY 9 69 560.8033661026968 1119.5921792721936 2 560.8035156130791 MULTI CID FTMS 0 0 0 8491 456454.59375 1.0 0 0.0 6 Unmodified _RADQELLLY_ ENSG00000114450|ENST00000232564|GNB4 18.373094154950223 0.3393451798331396 1 {[CP]|[EA]}RNE{I|L}{I|L}{I|L}Y 9 3 + 55.583 0.0 0.0 4.9646 4.9646 84.298 0.0 0.0 0.0 2.632192780232785 44.61426266193144 2.632192780232785 9.208187539523747 0 1.0 0.0 0.0 0.0 {[CP]|[EA]}RNE{I|L}{I|L}{I|L}Y;{[CP]|[EA]}[VG]NE{I|L}{I|L}{I|L}Y;{[CP]|[EA]}RGGE{I|L}{I|L}{I|L}Y;{[MG]|[TS]}[PA]NE{I|L}{I|L}{I|L}Y;{[CP]|[EA]}[VG]GGE{I|L}{I|L}{I|L}Y;{[MG]|[TS]}[PA]GGE{I|L}{I|L}{I|L}Y 4.9646;4.1421;4.1421;4.0556;3.3236;3.237 -;-;-;-;-;- 103 1 2.065 54138.8 1.0 4936 3559 8491 DOHH2_400M_050219_1,8497 DOHH2_400M_050219_1,8497,RADQELLLY False True RADQELLLY 48.01447 560.803515613079 2697537.0 8491.0 ENSG00000114450|ENST00000232564|GNB4 6.9783562024434405 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8498 48.018 192.0 341570.0 25 0 79296.0 + 28929 QARVRPARREA 11 79 655.3823448852442 1308.7501368372882 2 655.3825561404228 MULTI CID FTMS 0 0 0 8491 438674.1875 0.2251779132743248 -3 0.4443931579589844 7 Unmodified _QARVRPARREA_ REV__ENST00000432829.6_1_9:214876-286471:+|nuORF 1.0714618166137932 0.8700927088084459 1 H 1 -1 9.6777 0.0 0.0 0.73946 0.0 0.0 1153.6837438702944 0.0 1153.6837438702944 0.0 9.67771005386541 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.73946 - 4 + 1 2.065 64629.7 1.0 4937 3559 8491 DOHH2_400M_050219_1,8498 DOHH2_400M_050219_1,8498,QARVRPARREA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8499 48.02 92.0 857400.0 25 0 225760.0 + 35141 SREGRPIWQL 10 83 621.3412793208321 1240.668005708464 2 621.3417236208916 MULTI CID FTMS 0 0 0 8491 381515.625 0.9485999244756418 -1 0.1425361633300781 8 Unmodified _SREGRPIWQL_ ENSG00000113161|ENST00000287936|HMGCR;ENST00000504466.1_1_5:74645886-74647190:+|nuORF;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 17.86316937532769 0.5478153791579383 1 E[QP] 3 7 13.754 0.0 0.0 1.1086 0.0 0.0 868.49418837715 0.0 868.49418837715 0.0 0.2596217904876869 0.0 0.0 0 0.6307196863200843 0.0 0.0 0.0 E[QP] 1.1086 - 46 1 2.065 63532.7 1.0 4938 3559 8491 DOHH2_400M_050219_1,8499 DOHH2_400M_050219_1,8499,SREGRPIWQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8500 48.023 162.0 350530.0 25 0 43182.0 + 9163 FGEKNGSWLY 10 73 600.7885860006301 1199.56261906806 2 600.7885619997978 MULTI CID FTMS 0 0 0 8491 356891.8125 0.6468229744775225 -1 0.1425361633300781 9 Unmodified _FGEKNGSWLY_ ENSG00000170734|ENST00000372236|POLH;nc|ENSG00000170734|Q9Y253-2|POLH 38.17557092003332 0.1768326257063233 1 {[CT]|[{M(Oxidation (M))|F}G]}EK[NG]SW{I|L}Y 10 0 + 42.285 0.0 0.0 3.5251 3.5251 74.353 0.0 0.0 0.0 4.43434108191034 4.488927071389739 4.43434108191034 4.43434108191034 0 0.8935078169319297 0.0 1.066901560044258 0.3807196863200844 + + {[CT]|[{M(Oxidation (M))|F}G]}EK[NG]SW{I|L}Y;[W{I|L}][W{M(Oxidation (M))|F}]S[VS]{I|L}Y;[W{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}[VS]{I|L}Y;[W{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}{[DA]|[EG]}{I|L}Y;[W{I|L}][W{M(Oxidation (M))|F}]S{[DA]|[EG]}{I|L}Y;{[CT]|[{M(Oxidation (M))|F}G]}E[W{I|L}]SW{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W{M(Oxidation (M))|F}[WD][RP];[W{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}E{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Y;{[CT]|[{M(Oxidation (M))|F}G]}EKEE[VS]{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W[RH]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F} 3.5251;3.1554;3.1554;3.1554;3.1554;3.0609;2.6473;2.5504;2.2129;1.9605 +;-;-;-;-;-;-;-;-;- + 261 1 2.065 45296.8 1.0 4939 3559 8491 DOHH2_400M_050219_1,8500 DOHH2_400M_050219_1,8500,FGEKNGSWLY False True FGEKNGSWLY 48.023408 600.788561999798 3540372.5 8491.0 nc|ENSG00000170734|Q9Y253-2|POLH;;ENSG00000170734|ENST00000372236|POLH 7.007779598236084 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8501 48.027 176.0 294660.0 25 0 49511.0 + 42914 VVQGRKIPTER 11 76 641.8826648067551 1281.75077668031 2 641.8824340701103 MULTI CID FTMS 0 0 0 8491 337082.40625 0.2764892086375193 3 -0.3189811706542969 10 Unmodified _VVQGRKIPTER_ REV__ENST00000277141.10_2_9:88941382-88968129:-|nuORF;REV__nc|ENSG00000083223|Q5VYS8-3|TUT7 3.2813086475875832 0.8596665074481906 1 VVQ 3 -1 19.41 0.0 0.0 1.5143 0.0 0.0 0.0 952.5337411180632 952.5337411180632 7.816206019771531 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 VVQ 1.5143 + + 22 1 2.065 44817.5 1.0 4940 3559 8491 DOHH2_400M_050219_1,8501 DOHH2_400M_050219_1,8501,VVQGRKIPTER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8502 48.03 152.0 790090.0 25 0 142020.0 + 33574 SINDKIIEL 9 119 522.8003160677929 1043.5860792023857 2 522.7996093630791 MULTI CID FTMS 0 0 0 8491 256062.1875 0.0544833914951229 -2 0.2794723510742187 11 Unmodified _SINDKIIEL_ ENSG00000072310|ENST00000261646|SREBF1;ENSG00000198911|ENST00000361204|SREBF2;ENST00000470247.1_1_17:17721556-17722545:-|nuORF;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1;nc|ENSG00000198911|Q12772-2|SREBF2 59.05245873256422 0.0266066919017776 1 {[TV]|[{I|L}S]}N[VG]{I|L}S{I|L}E{I|L} 10 3 + 84.486 0.0 0.0 8.0957 8.0957 83.339 0.0 0.0 0.0 10.306810099572417 16.53212513775344 10.306810099572417 1.21469385014791 0 1.7302046884880935 2.0 0.8494850021680094 0.3494850021680094 {[TV]|[{I|L}S]}N[VG]{I|L}S{I|L}E{I|L};{[TV]|[{I|L}S]}NDK{I|L}{I|L}E{I|L};{[TV]|[{I|L}S]}N[VG]S{I|L}{I|L}E{I|L};{[TV]|[{I|L}S]}NKD{I|L}{I|L}E{I|L};{[TV]|[{I|L}S]}NK{I|L}D{I|L}E{I|L};{[TV]|[{I|L}S]}N[VG]{I|L}SE{I|L}{I|L};{[TV]|[{I|L}S]}NDK{I|L}E{I|L}{I|L};[DN]K{I|L}{I|L}S{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}{I|L}S{I|L}E{I|L};{[TV]|[{I|L}S]}GGDK{I|L}{I|L}E{I|L} 8.0957;7.9793;7.9312;7.4019;7.2662;7.2315;7.1151;7.1081;7.1081;7.097 -;+;-;-;-;-;-;-;-;- + 1510 1 2.065 95691.0 1.0 4941 3559 8491 DOHH2_400M_050219_1,8502 DOHH2_400M_050219_1,8502,SINDKIIEL True True SINDKIIEL 48.029868 522.799609363079 81043338.0 8491.0 nc|ENSG00000072310|P36956-5|SREBF1;;ENST00000470247.1_1_17:17721556-17722545:-|nuORF;;ENSG00000072310|ENST00000261646|SREBF1;;nc|ENSG00000072310|P36956-3|SREBF1;;nc|ENSG00000072310|P36956-6|SREBF1;;nc|ENSG00000198911|Q12772-2|SREBF2;;ENSG00000198911|ENST00000361204|SREBF2;;nc|ENSG00000072310|P36956-2|SREBF1;;nc|ENSG00000072310|P36956-4|SREBF1 4.811159610748291 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8503 48.034 227.0 328260.0 25 0 62591.0 43779 YELKKKVIE 9 98 575.3452750414566 1148.675997149713 2 575.3453857302666 MULTI CID FTMS 0 0 0 8491 230402.3125 0.8335524559692387 -1 0.1425361633300781 12 Unmodified _YELKKKVIE_ ENSG00000165935|ENST00000535986|SMCO2 4.3292370932331545 0.7635526921153418 1 [YE]{I|L} 3 6 27.447 0.0 0.0 2.3895 0.0 0.0 0.0 740.4640885405912 740.4640885405912 10.01226231188276 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + [YE]{I|L} 2.3895 + + 83 1 2.065 60174.0 1.0 4942 3559 8491 DOHH2_400M_050219_1,8503 DOHH2_400M_050219_1,8503,YELKKKVIE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8504 48.048 800.0 174610.0 25 0 40193.0 + 35172 SRSPRRLWLR 10 139 663.8958194908566 1325.7770860485132 2 663.8959838747978 MULTI CID FTMS 0 0 0 8491 203254.15625 0.2601977302292773 -4 0.5579338073730469 13 Unmodified _SRSPRRLWLR_ REV__chr17:50379567-50380312|47|13.7|0.84|4.02|+|2|EME1,EME1|1 1.4819007175156935 0.719781833666733 1 W 1 -1 10.485 0.0 0.0 0.79082 0.0 0.0 1121.6868130766366 0.0 1121.6868130766366 0.0 0.2069634257911268 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.79082 + + 45 + 1 2.065 118133.1 0.8299999833106995 4943 3559 8491 DOHH2_400M_050219_1,8504 DOHH2_400M_050219_1,8504,SRSPRRLWLR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8505 48.053 282.0 429530.0 25 0 54400.0 + -1 PLTLHCII 8 145 483.7736293749859 965.5327058167718 2 484.2416259646416 MULTI CID FTMS 0 0 0 8491 24271.03125 0.4923146454436413 1 -0.1084671020507812 14 Carbamidomethyl (C) _PLTLHC(Carbamidomethyl (C))II_ REV__ENSG00000189079|ENST00000334344|ARID2;REV__ENST00000479608.5_1_12:46230576-46239804:+|nuORF;REV__ENST00000480128.1_1_12:46231109-46233281:+|nuORF;REV__nc|ENSG00000189079|Q68CP9-3|ARID2 20.871210003555333 0.6025813472596342 1 PK[{I|L}P]T{I|L} 6 -1 31.546 0.0 0.0 3.2672 0.0 0.0 298.1059059065672 0.0 298.1059059065672 0.0 7.187653158479247 0.0 0.0 0 0.0 0.0 1.392159058960253 0.0 PK[{I|L}P]T{I|L} 3.2672 - 361 + 1 2.065 93471.1 1.0 4944 3559 8491 DOHH2_400M_050219_1,8505 DOHH2_400M_050219_1,8505,PLTLHCII False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8506 48.067 800.0 145730.0 25 0 9497.1 -1 0 115 1010.9740434930644 2019.9335340529285 2 1011.475634753704 MULTI CID FTMS 0 0 0 8491 185196.125 1.0 0 0.0 15 1 K[RK]QEEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 12 -1 63.597 0.0 0.0 3.1485 0.0 0.0 522.2164173810562 0.0 522.2164173810562 0.0 15.601137923701998 0.0 0.0 0 1.305462187404089 0.0 0.3252574989159953 1.4436726795685342 K[RK]QEEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.1485 - 3068 1 2.065 78831.8 0.7799999713897705 4945 3559 8491 DOHH2_400M_050219_1,8506 DOHH2_400M_050219_1,8506, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8507 48.081 800.0 94599.0 25 0 21310.0 19516 LFLVFLLMYVI 11 102 685.9087277988378 1369.8029026644756 2 685.9084350466728 MULTI CID FTMS 0 0 0 8491 176927.265625 0.5239755347946081 1 -0.1084671020507812 16 Unmodified _LFLVFLLMYVI_ ENSG00000186113|ENST00000335605|OR5D14 1.4819007175156935 0.86815623132643 1 Y 1 10 12.218 0.0 0.0 0.89199 0.0 0.0 1188.728529350802 0.0 1188.728529350802 0.0 2.464577609514471 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.89199 + + 32 + 1 2.065 69094.5 0.7799999713897705 4946 3559 8491 DOHH2_400M_050219_1,8507 DOHH2_400M_050219_1,8507,LFLVFLLMYVI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8508 48.086 201.0 306390.0 25 0 13947.0 + 29909 QSDPWQQELY 10 102 647.2915316383867 1292.5685103435733 2 647.2927734255791 MULTI CID FTMS 0 0 0 8491 179018.140625 0.710841700563584 -1 0.1425361633300781 17 Unmodified _QSDPWQQELY_ ENSG00000072778|ENST00000356839|ACADVL;ENST00000578033.1_1_17:7127960-7128413:+|nuORF;ENST00000578319.5_1_17:7127738-7128413:+|nuORF;ENST00000578711.1_1_17:7128236-7128413:+|nuORF;nc|ENSG00000072778|P49748-2|ACADVL;nc|ENSG00000072778|P49748-3|ACADVL 47.594388314883695 0.0942698883389255 1 [AG]EQ{NN|[MP]|[D{I|L}]|[EV]}QQE{I|L}Y 11 5 + 62.119 0.0 0.0 4.8058 4.8058 76.396 0.0 0.0 0.0 2.8310179759161542 11.302663821573477 2.8310179759161542 2.8310179759161542 0 0.8182503180159344 1.154901959985743 1.7218487496163564 1.1382104921644451 [AG]EQ{NN|[MP]|[D{I|L}]|[EV]}QQE{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{NN|[MP]|[D{I|L}]|[EV]}QQE{I|L}Y;[AG]EQ{NN|[MP]|[D{I|L}]|[EV]}Q[AG]E{I|L}Y;[AG]EQ{NN|[MP]|[D{I|L}]|[EV]}[AG]QE{I|L}Y;[AG]QE{NN|[MP]|[D{I|L}]|[EV]}QQE{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]{NN|[MP]|[D{I|L}]|[EV]}QQE{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{NN|[MP]|[D{I|L}]|[EV]}Q[AG]E{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{NN|[MP]|[D{I|L}]|[EV]}[AG]QE{I|L}Y;[AG]E[AG]{NN|[MP]|[D{I|L}]|[EV]}QQE{I|L}Y;QQE{NN|[MP]|[D{I|L}]|[EV]}QQE{I|L}Y 4.8058;4.5868;4.0996;4.0996;4.0322;3.8778;3.8778;3.8778;3.771;3.5615 -;-;-;-;-;-;-;-;-;- 615 1 2.065 55238.8 1.0 4947 3559 8491 DOHH2_400M_050219_1,8508 DOHH2_400M_050219_1,8508,QSDPWQQELY True True QSDPWQQELY 48.086176 647.292773425579 2045719.625 8491.0 ENST00000578711.1_1_17:7128236-7128413:+|nuORF;;nc|ENSG00000072778|P49748-3|ACADVL;;ENST00000578033.1_1_17:7127960-7128413:+|nuORF;;ENSG00000072778|ENST00000356839|ACADVL;;nc|ENSG00000072778|P49748-2|ACADVL;;ENST00000578319.5_1_17:7127738-7128413:+|nuORF 5.891527811686198 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8509 48.095 471.0 214490.0 25 0 30844.0 38822 TVGKRNVTL 9 128 494.3009734339386 986.5873939346772 2 494.3013793826103 MULTI CID FTMS 0 0 0 8491 151984.40625 0.0530468299740104 3 -0.3189811706542969 18 Unmodified _TVGKRNVTL_ ENSG00000149256|ENST00000278550|TENM4 9.38312468134398 0.5871240394367778 1 [VP][KG]HHVT{I|L} 9 3 [VP][KG]HHV + + 14.803 -16.822 -2.2298 1.5004 1.5004 48.563 0.0 0.0 0.0 0.0 3.543538424369361 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [VP][KG]HHVT{I|L} 1.5004 - 73 + 1 2.065 82208.5 1.0 4948 3559 8491 DOHH2_400M_050219_1,8509 DOHH2_400M_050219_1,8509,TVGKRNVTL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8510 48.103 462.0 215190.0 25 0 25483.0 1734 ALQDASVLI 9 120 465.2692411792208 928.5239294252416 2 465.2694579958916 MULTI CID FTMS 0 0 0 8491 155987.875 1.0 0 0.0 19 Unmodified _ALQDASVLI_ ENSG00000141748|ENST00000269586|ARL5C 26.88365393820708 0.1891292719743517 1 {I|L}C{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L} 6 5 32.708 0.0 0.0 3.5226 0.0 0.0 248.1779718795396 0.0 248.1779718795396 0.0 20.445312593723983 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 {I|L}C{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L} 3.5226 - 332 + 1 2.065 80968.2 1.0 4949 3559 8491 DOHH2_400M_050219_1,8510 DOHH2_400M_050219_1,8510,ALQDASVLI False True AIQDGTIVL 48.102701 465.269457995892 846206.875 8491.0 ENSG00000196937|ENST00000359943|FAM3C 3.8810415267944336 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8511 48.105 94.0 625070.0 25 0 59922.0 + 6283 DVDHGNFFTY 10 73 607.759373267244 1213.504193601288 2 607.7588378787041 MULTI CID FTMS 0 0 0 8491 138484.484375 0.2286844721327691 -1 0.1425361633300781 20 Unmodified _DVDHGNFFTY_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENSG00000276043|ENST00000650932|UHRF1;ENST00000540175.1_1_12:20704556-20705942:+|nuORF;nc|ENSG00000276043|Q96T88-2|UHRF1 61.60191391372663 0.0323840705564037 1 [YT]{[DS]|[MA]|[CV]|TT}GN{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY 10 3 + 70.653 0.0 0.0 5.8223 5.8223 78.838 0.0 0.0 0.0 1.7609125905568137 15.026975159433531 1.7609125905568137 1.7609125905568137 0 1.325257498915995 1.5228787452803376 0.8807196863200843 0.0 [YT]{[DS]|[MA]|[CV]|TT}GN{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY;[DV][HD]GN{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY;[YT]{[DS]|[MA]|[CV]|TT}GGG{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY;[DV][HD]GGG{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY;[DV]{[QS]|[NT]}M[HS]{M(Oxidation (M))|F}TY;[QA]QYYM{M(Oxidation (M))|F}TY;[QA]Q{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY;[YT]N[KC]{M(Oxidation (M))|F}{M(Oxidation (M))|F}EY;[QA]{[ET]|[MV]}[HS]M{M(Oxidation (M))|F}TY;[QA][AG]YYM{M(Oxidation (M))|F}TY 5.8223;5.6772;5.0671;4.9219;4.1341;4.0464;4.0427;3.7346;3.5824;3.2875 -;+;-;-;-;-;-;-;-;- + 561 1 2.065 51016.8 1.0 4950 3559 8491 DOHH2_400M_050219_1,8511 DOHH2_400M_050219_1,8511,DVDHGNFFTY True True DVDHGNFFTY 48.104772 607.758837878704 4347663.0 8491.0 ENSG00000276043|ENST00000650932|UHRF1;;ENST00000540175.1_1_12:20704556-20705942:+|nuORF;;chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;;nc|ENSG00000276043|Q96T88-2|UHRF1 8.421433925628662 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8513 48.116 403.0 214650.0 25 0 16925.0 + 7594 EINKAFELM 9 116 547.7817421360617 1093.5489313389232 2 547.7816650271416 MULTI CID FTMS 0 0 0 8512 174475.78125 0.66065256069168 1 -0.124237060546875 1 Unmodified _EINKAFELM_ ENSG00000197894|ENST00000296412|ADH5;ENST00000414059.2_1_1:52625935-52626067:-|nuORF;ENST00000512621.5_1_4:99993722-100006301:-|nuORF 38.17557092003332 0.0854718145212029 1 {NN|[MP]|[D{I|L}]|[EV]}[KQ]A{M(Oxidation (M))|F}{I|L}EM 9 4 + 45.958 0.0 0.0 4.2027 4.2027 79.023 0.0 0.0 0.0 8.034658492768713 14.988980243063388 8.034658492768713 7.271212547196619 0 0.25 1.154901959985743 0.6747425010840047 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}[KQ]A{M(Oxidation (M))|F}{I|L}EM;{NN|[MP]|[D{I|L}]|[EV]}[KQ]A{M(Oxidation (M))|F}E{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}A[K{I|L}]{M(Oxidation (M))|F}{I|L}EM;{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}[K{I|L}]{I|L}EM;{[QD]|[EN]|[WG]|[KD]|[RS]}[K{I|L}]A{M(Oxidation (M))|F}{I|L}EM;[{I|L}T][RN]A{M(Oxidation (M))|F}{I|L}EM;{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}T][{I|L}V]{I|L}EM;{[QD]|[EN]|[WG]|[KD]|[RS]}RR{M(Oxidation (M))|F}{I|L}EM;{[MG]|[TS]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[K{I|L}]{I|L}EM;{[VA]|[{I|L}G]}[WK]A{M(Oxidation (M))|F}{I|L}EM 4.2027;3.5377;3.4679;3.4679;3.4015;3.3636;3.269;3.1508;2.9049;2.8997 -;-;-;-;-;-;-;-;-;- 413 1 2.062 71361.3 1.0 4951 3560 8512 DOHH2_400M_050219_1,8513 DOHH2_400M_050219_1,8513,EINKAFELM True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8514 48.117 36.0 1799900.0 25 0 201420.0 + 8737 EVNKRPIFI 9 79 372.5573537678063 1114.650231903619 3 372.5571777224541 MULTI CID FTMS 0 0 0 8512 1227448.25 1.0 0 0.0 2 Unmodified _EVNKRPIFI_ REV__ENST00000507678.5_1_4:177243228-177249478:+|nuORF 10.073929032068715 0.563993802247229 1 RD{I|L}{M(Oxidation (M))|F}{I|L} 5 -1 21.95 0.0 0.0 1.9693 0.0 0.0 452.2861231875417 0.0 452.2861231875417 0.0 7.346368802282015 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 RD{I|L}{M(Oxidation (M))|F}{I|L} 1.9693 - 50 1 2.062 58194.3 1.0 4952 3560 8512 DOHH2_400M_050219_1,8514 DOHH2_400M_050219_1,8514,EVNKRPIFI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8515 48.118 48.0 1432300.0 25 0 158390.0 + 6920 EEFQKELSQW 10 99 662.3144581625755 1322.614363391951 2 662.3148681521416 MULTI CID FTMS 0 0 0 8512 1138719.875 0.3667545183057216 -1 0.1084671020507812 3 Unmodified _EEFQKELSQW_ ENSG00000100109|ENST00000407690|TFIP11 84.06023858526366 0.0137402908938907 1 EE{M(Oxidation (M))|F}GAGS{I|L}{I|L}SQW 12 5 + 76.8 0.0 0.0 5.8067 5.8067 77.215 0.0 0.0 0.0 25.09400577820757 11.901552601841589 11.901552601841589 0.591214521186572 0 1.798455006504028 1.3979400086720375 0.4247425010840047 0.8807196863200843 EE{M(Oxidation (M))|F}GAGS{I|L}{I|L}SQW;EE{M(Oxidation (M))|F}QGS{I|L}{I|L}SQW;EE{M(Oxidation (M))|F}GAKE{I|L}SQW;EE{M(Oxidation (M))|F}GAGS{I|L}KEAW;EE{M(Oxidation (M))|F}QKE{I|L}SQW;EE{M(Oxidation (M))|F}QGS{I|L}KEAW;EE{M(Oxidation (M))|F}GAKEKEAW;EE{M(Oxidation (M))|F}QKEKEAW;EE{M(Oxidation (M))|F}GQS{I|L}{I|L}SQW;EE{M(Oxidation (M))|F}QGS{I|L}{I|L}SGAW 5.8067;5.762;5.7012;5.6962;5.6592;5.6515;5.5907;5.5487;5.5344;5.5231 -;-;-;-;+;-;-;-;-;- + 2822 + 1 2.062 56479.9 1.0 4953 3560 8512 DOHH2_400M_050219_1,8515 DOHH2_400M_050219_1,8515,EEFQKELSQW True True EEFQKELSQW 48.118353 662.314868152142 35580724.0 8512.0 ENSG00000100109|ENST00000407690|TFIP11 8.528708457946777 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8516 48.12 91.0 786390.0 25 0 89849.0 + 35241 SSEELLSLKY 10 95 584.8085814526855 1167.602609972171 2 584.8088256716728 MULTI CID FTMS 0 0 0 8512 651968.25 1.0 0 0.0 4 Unmodified _SSEELLSLKY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 80.6760300276096 0.0165137828474802 1 {[CA]|SS}EE{I|L}{I|L}S{I|L}KY 10 0 + 75.737 0.0 0.0 6.4865 6.4865 94.96 0.0 0.0 0.0 54.93017638764117 14.146518864155126 14.146518864155126 75.73699398972998 0 1.6307196863200843 0.0 0.0 0.3054621874040891 + + {[CA]|SS}EE{I|L}{I|L}S{I|L}KY 6.4865 + + 298 + 1 2.062 57870.8 1.0 4954 3560 8512 DOHH2_400M_050219_1,8516 DOHH2_400M_050219_1,8516,SSEELLSLKY True True SSEELLSLKY 48.120363 584.808825671673 4392637.0 8512.0 ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;nc|ENSG00000134954|P14921-2|ETS1;;nc|ENSG00000134954|P14921-5|ETS1 8.620633920033773 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8517 48.122 82.0 736900.0 25 0 85489.0 + 35246 SSENPWMTEY 10 89 622.250326760124 1242.486100587048 2 622.2508422732353 MULTI CID FTMS 0 0 0 8512 495473.03125 0.5744430866779484 -1 0.1084671020507812 5 Unmodified _SSENPWMTEY_ ENSG00000154429|ENST00000284617|CCSAP;ENST00000483092.1_1_1:229460984-229462796:-|nuORF;nc|ENSG00000154429|Q6IQ19-2|CCSAP 72.96794272382148 0.0188410189619069 1 [WP]{[QC]|[C(Carbamidomethyl (C))A]}WM 6 8 30.3 0.0 0.0 2.4387 0.0 0.0 0.0 408.1387854837855 408.1387854837855 8.556766893690497 0.0 0.0 0.0 0 0.6382104921644451 1.2218487496163564 0.0 0.805462187404089 [WP]{[QC]|[C(Carbamidomethyl (C))A]}WM 2.4387 - 334 1 2.062 51990.9 1.0 4955 3560 8512 DOHH2_400M_050219_1,8517 DOHH2_400M_050219_1,8517,SSENPWMTEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8518 48.124 104.0 455530.0 25 0 143210.0 + 25146 MQNPNAIIL 9 68 507.2756495517893 1012.5367461703788 2 507.2762939333916 MULTI CID FTMS 0 0 0 8512 473578.1875 0.867592304435234 -1 0.1084671020507812 6 Unmodified _MQNPNAIIL_ ENSG00000198836|ENST00000361510|OPA1;ENST00000475899.1_1_3:193355061-193361921:+|nuORF;nc|ENSG00000198836|O60313-11|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313|OPA1 34.10243960390752 0.1078313939113124 1 [NP]AN{[MG]|[TS]}A{I|L}{I|L}{I|L} 10 5 + 39.046 0.0 0.0 3.8563 3.8563 76.52 0.0 0.0 0.0 3.379231027444405 23.561603143133496 3.379231027444405 5.7672878367107145 0 0.8182503180159344 0.0 0.0 1.1989700043360187 [NP]AN{[MG]|[TS]}A{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N[NP]A{I|L}{I|L}{I|L};[NP]A{I|L}MQN{I|L}{I|L};[NP]AN{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L};[NP]AGG{[MG]|[TS]}A{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GG[NP]A{I|L}{I|L}{I|L};[NP]A{I|L}M[AG]N{I|L}{I|L};[NP]A{I|L}MQGG{I|L}{I|L};[NP]AGG{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L};[NP]A[KP]{M(Oxidation (M))|F}N{I|L}{I|L} 3.8563;3.2867;3.2325;3.2111;2.9512;2.3773;2.3231;2.3231;2.3017;1.5823 -;+;-;-;-;-;-;-;-;- + 136 1 2.062 40577.9 1.0 4956 3560 8512 DOHH2_400M_050219_1,8518 DOHH2_400M_050219_1,8518,MQNPNAIIL True True MQNPNAIIL 48.124468 507.276293933392 3675896.5 8512.0 ENST00000475899.1_1_3:193355061-193361921:+|nuORF;;ENSG00000198836|ENST00000361510|OPA1;;nc|ENSG00000198836|O60313-9|OPA1;;nc|ENSG00000198836|O60313-2|OPA1;;nc|ENSG00000198836|O60313-13|OPA1;;nc|ENSG00000198836|O60313|OPA1;;nc|ENSG00000198836|O60313-11|OPA1 5.8547593752543134 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8519 48.128 169.0 637870.0 25 0 93998.0 + 7421 EGLPKPLTL 9 105 484.2947371486141 966.574921364028 2 484.2946960330009 MULTI CID FTMS 0 0 0 8512 412881.59375 0.4477189402825938 -1 0.1084671020507812 7 Unmodified _EGLPKPLTL_ ENSG00000206503|ENST00000376809|HLA-A;ENSG00000234745|ENST00000412585|HLA-B;ENST00000495183.5_1_6:29910749-29913287:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;nc|ENSG00000206503|P04439-2|HLA-A 61.357469665136826 0.0253304979873734 1 {[DA]|[EG]}{I|L}PK[{I|L}P]T{I|L} 9 0 {[DA]|[EG]}{I|L} + + 36.635 24.265 8.1113 3.7901 3.7901 52.582 0.0 0.0 0.0 0.0 11.187497683456044 0.0 0.0 0 0.3252574989159953 0.0 1.3996498648046138 0.0 + + {[DA]|[EG]}{I|L}PK[{I|L}P]T{I|L} 3.7901 + + 415 + 1 2.062 87068.2 1.0 4957 3560 8512 DOHH2_400M_050219_1,8519 DOHH2_400M_050219_1,8519,EGLPKPLTL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8520 48.132 246.0 240720.0 25 0 19339.0 -1 0 64 1016.1433212290592 3045.4081342873774 3 1016.479052722454 MULTI CID FTMS 0 0 0 8512 399442.1875 1.0 0 0.0 8 1 [NP]{I|L}N{M(Oxidation (M))|F}N 6 -1 19.385 0.0 0.0 0.63655 0.0 0.0 0.0 2343.084561859896 2343.084561859896 4.921525057367408 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}N{M(Oxidation (M))|F}N 0.63655 - 219 1 2.062 48055.3 1.0 4958 3560 8512 DOHH2_400M_050219_1,8520 DOHH2_400M_050219_1,8520, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8521 48.135 147.0 653500.0 25 0 56949.0 + 16703 KESSTVFEL 9 103 520.2693298181548 1038.5241067031095 2 520.2697631716728 MULTI CID FTMS 0 0 0 8512 372064.625 0.5813431988263438 -1 0.1084671020507812 9 Unmodified _KESSTVFEL_ ENSG00000103363|ENST00000409906|ELOB;nc|ENSG00000103363|Q15370-2|ELOB 59.05245873256422 0.0266066919017776 1 {[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}K{M(Oxidation (M))|F}E{I|L} 8 5 + 65.23 0.0 0.0 6.281 6.281 80.234 0.0 0.0 0.0 1.6931014647885547 10.2276412536485 1.6931014647885547 1.6931014647885547 0 1.0044321917401078 0.0 1.6080670093629827 0.0 {[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}K{M(Oxidation (M))|F}E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QV{M(Oxidation (M))|F}E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}AGV{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}KE{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}NK{M(Oxidation (M))|F}E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QVE{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}GG{M(Oxidation (M))|F}K{M(Oxidation (M))|F}E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}AGVE{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}V{M(Oxidation (M))|F}E{I|L};{[MG]|[TS]}[VS]TGV{M(Oxidation (M))|F}E{I|L} 6.281;6.118;5.823;5.6847;5.5909;5.5217;5.3892;5.2267;5.0237;5.0002 -;-;-;-;-;-;-;-;-;- 771 1 2.062 76457.3 1.0 4959 3560 8512 DOHH2_400M_050219_1,8521 DOHH2_400M_050219_1,8521,KESSTVFEL True True KESSTVFEL 48.135368 520.269763171673 3915892.5 8512.0 nc|ENSG00000103363|Q15370-2|ELOB;;ENSG00000103363|ENST00000409906|ELOB 3.726497650146485 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8522 48.142 344.0 453940.0 25 0 42733.0 + 751 AEQPSGFTF 9 155 492.2265995871764 982.4386462411528 2 492.2268859744072 MULTI CID FTMS 0 0 0 8512 263258.90625 1.0 0 0.0 10 Unmodified _AEQPSGFTF_ ENSG00000198000|ENST00000442668|NOL8;nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8 34.40172386719151 0.1061884637610825 1 WT{M(Oxidation (M))|F} 3 7 24.966 0.0 0.0 2.5412 0.0 0.0 530.2334962077813 0.0 530.2334962077813 0.0 10.159940911636768 0.0 0.0 0 0.3054621874040891 0.0 0.3494850021680094 0.0 WT{M(Oxidation (M))|F} 2.5412 - 613 + 1 2.062 118407.7 1.0 4960 3560 8512 DOHH2_400M_050219_1,8522 DOHH2_400M_050219_1,8522,AEQPSGFTF True True AEQPSGFTF 48.141584 492.226885974407 2009578.875 8512.0 nc|ENSG00000198000|Q76FK4-2|NOL8;;nc|ENSG00000198000|Q76FK4-4|NOL8;;ENSG00000198000|ENST00000442668|NOL8 3.033928533395132 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8523 48.145 187.0 320980.0 25 0 26279.0 + 38784 TVDNVQPLLY 10 93 581.310459614644 1160.6063662960878 2 581.3105956912041 MULTI CID FTMS 0 0 0 8512 259375.6875 1.0 0 0.0 11 Unmodified _TVDNVQPLLY_ ENSG00000145332|ENST00000273963|KLHL8 85.64151623876279 0.0124443716933876 1 {I|L}PQVT{M(Oxidation (M))|F}Y 7 8 73.55 0.0 0.0 6.3372 0.0 0.0 294.1591749892503 0.0 294.1591749892503 0.0 56.63888870249359 0.0 0.0 0 0.9247425010840048 0.0 1.4361818737241734 0.8494850021680094 {I|L}PQVT{M(Oxidation (M))|F}Y 6.3372 - 370 + 1 2.062 51030.7 1.0 4961 3560 8512 DOHH2_400M_050219_1,8523 DOHH2_400M_050219_1,8523,TVDNVQPLLY True True TVDNVQPLLY 48.145203 581.310595691204 1723463.5 8512.0 ENSG00000145332|ENST00000273963|KLHL8 7.777265866597493 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8524 48.159 800.0 171000.0 25 0 39340.0 + 13506 HMLWLKRLSTL 11 127 699.4090460504301 1396.80353916766 2 699.4093505740166 MULTI CID FTMS 0 0 0 8512 149649.953125 0.389813505990511 -4 0.5528602600097656 12 Unmodified _HMLWLKRLSTL_ REV__ENSG00000131409|ENST00000652263|LRRC4B 3.5964929083625545 0.858179447565866 1 Y 1 -1 10.969 0.0 0.0 0.7853 0.0 0.0 1215.729486288557 0.0 1215.729486288557 0.0 1.9347231218528729 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.7853 - 78 + 1 2.062 110261.9 0.6800000071525574 4962 3560 8512 DOHH2_400M_050219_1,8524 DOHH2_400M_050219_1,8524,HMLWLKRLSTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8525 48.164 253.0 216970.0 25 0 27555.0 7624 EITKRAQDI 9 102 537.3009160781048 1072.5872792230095 2 537.3018676638603 MULTI CID FTMS 0 0 0 8512 151221.0625 0.8975241214033509 -1 0.1084671020507812 13 Unmodified _EITKRAQDI_ ENSG00000212916|ENST00000418460|MAP10 7.910154910731844 0.6385446671287552 1 {I|L} 1 8 12.474 0.0 0.0 1.163 0.0 0.0 941.4924591319924 0.0 941.4924591319924 0.0 2.7965400545350594 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.163 + + 32 + 1 2.062 47434.4 1.0 4963 3560 8512 DOHH2_400M_050219_1,8525 DOHH2_400M_050219_1,8525,EITKRAQDI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8526 48.175 647.0 219710.0 25 0 14912.0 + 2010 APASRLLAL 9 153 456.28713893347657 910.5597249337532 2 456.2868224978447 MULTI CID FTMS 0 0 0 8512 142002.796875 1.0 0 0.0 14 Unmodified _APASRLLAL_ ENSG00000161999|ENST00000609261|JMJD8;ENST00000565302.5_1_16:733531-734319:-|nuORF;ENST00000567120.5_1_16:734232-734409:-|nuORF;ENST00000568689.5_1_16:733170-734340:-|nuORF;ENST00000569441.5_1_16:734052-734319:-|nuORF;nc|ENSG00000161999|Q96S16-2|JMJD8 36.506200033944 0.094635877243972 1 APA 3 6 43.162 0.0 0.0 4.7401 0.0 0.0 0.0 668.4132273423346 668.4132273423346 11.931890546242345 0.0 0.0 0.0 0 0.5994850021680094 1.6989700043360187 0.0 0.0 + APA 4.7401 + + 336 + 1 2.062 110571.7 1.0 4964 3560 8512 DOHH2_400M_050219_1,8526 DOHH2_400M_050219_1,8526,APASRLLAL True True APASRLLAL 48.17503 456.286822497845 719807.0 8512.0 ENST00000569441.5_1_16:734052-734319:-|nuORF;;ENSG00000161999|ENST00000609261|JMJD8;;ENST00000568689.5_1_16:733170-734340:-|nuORF;;ENST00000565302.5_1_16:733531-734319:-|nuORF;;ENST00000567120.5_1_16:734232-734409:-|nuORF;;nc|ENSG00000161999|Q96S16-2|JMJD8 4.153698285420735 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8527 48.182 324.0 259510.0 25 0 68624.0 + 18839 LASPHSPIL 9 107 467.7718324308837 933.5291119285674 2 467.7715331912041 MULTI CID FTMS 0 0 0 8512 126836.7109375 0.4124785758892435 -1 0.1084671020507812 15 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 36.04419817259434 0.0971720506436186 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}APS{I|L}{I|L} 9 5 + 63.968 0.0 0.0 6.8522 6.8522 91.641 0.0 0.0 0.0 9.44968960007344 55.49776106607016 9.44968960007344 9.585521743960328 0 0.9247425010840048 0.0 1.566901560044258 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}APS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VTAPS{I|L}{I|L};[{I|L}A][PS]HPS{I|L}{I|L};{[TV]|[{I|L}S]}[PA]HPS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}A{I|L}[PS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP[TA]S{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPS[TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VTA{I|L}[PS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L} 6.8522;5.8254;5.2651;4.9862;4.7126;4.0944;3.8653;3.7315;3.6858;3.6825 -;-;-;-;-;-;-;-;-;- 481 1 2.062 71732.6 1.0 4965 3560 8512 DOHH2_400M_050219_1,8527 DOHH2_400M_050219_1,8527,LASPHSPIL True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8528 48.196 800.0 61923.0 25 0 2674.0 -1 0 97 881.9067078358692 0 881.9149047732353 PEAK CID FTMS 0 0 0 -1 0 16 1 {I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}{M(Oxidation (M))|F} 6 -1 16.471 0.0 0.0 0.9349 0.0 0.0 880.3508169395133 132.0457705133422 1012.3965874528554 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 {I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}{M(Oxidation (M))|F} 0.9349 - 424 + 1 2.062 38843.2 0.5199999809265137 4966 3560 8512 DOHH2_400M_050219_1,8528 DOHH2_400M_050219_1,8528, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8529 48.2 221.0 186330.0 25 0 37241.0 + 6607 EAQLQLIL 8 72 464.2797673060303 926.5449816788606 2 464.2798034548759 MULTI CID FTMS 0 0 0 8512 116699.7734375 1.0 0 0.0 17 Unmodified _EAQLQLIL_ REV__ENSG00000144821|ENST00000693548|MYH15;REV__ENST00000478998.5_1_3:108124174-108178278:-|nuORF 24.67388899826682 0.525179942228231 1 {I|L}[HT]{I|L}{I|L} 5 -1 23.5 0.0 0.0 2.5363 0.0 0.0 331.1748167392106 0.0 331.1748167392106 0.0 20.00508444608478 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 {I|L}[HT]{I|L}{I|L} 2.5363 - 48 + 1 2.062 37543.4 1.0 4967 3560 8512 DOHH2_400M_050219_1,8529 DOHH2_400M_050219_1,8529,EAQLQLIL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8530 48.206 348.0 198250.0 25 0 41912.0 + 35303 SSRERRRKRL 10 102 672.4094461251519 1342.8043393171038 2 672.4087402224541 MULTI CID FTMS 0 0 0 8512 111611.9375 0.3385673965423786 -3 0.387939453125 18 Unmodified _SSRERRRKRL_ REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF 1.4819007175156935 0.719781833666733 1 Y 1 -1 11.99 0.0 0.0 0.89289 0.0 0.0 1161.729874450696 0.0 1161.729874450696 0.0 2.841008620334975 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.89289 - 31 + 1 2.062 62378.6 1.0 4968 3560 8512 DOHH2_400M_050219_1,8530 DOHH2_400M_050219_1,8530,SSRERRRKRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8531 48.214 429.0 204610.0 25 0 34100.0 1339 AKKAGRGLF 9 114 474.2927777547425 946.571002576285 2 474.2930786013603 MULTI CID FTMS 0 0 0 8512 114882.609375 1.0 0 0.0 19 Unmodified _AKKAGRGLF_ ENSG00000204851|ENST00000599531|PNMA8B 16.942295170755138 0.3780752226737986 1 {I|L}{M(Oxidation (M))|F} 2 7 26.013 0.0 0.0 2.7482 0.0 0.0 668.4080568430325 0.0 668.4080568430325 0.0 14.593438765655636 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {I|L}{M(Oxidation (M))|F} 2.7482 + + 74 1 2.062 73785.2 1.0 4969 3560 8512 DOHH2_400M_050219_1,8531 DOHH2_400M_050219_1,8531,AKKAGRGLF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8532 48.229 800.0 103550.0 25 0 12740.0 26347 NSHLIVHKRIH 11 103 451.9327497525827 1352.7764198579482 3 451.9328796267509 MULTI CID FTMS 0 0 0 8512 105296.28125 0.5233280684425959 2 -0.2105140686035156 20 Unmodified _NSHLIVHKRIH_ ENSG00000166704|ENST00000551380|ZNF606 1.1933415558491238 0.8695176722560516 1 W 1 11 11.42 0.0 0.0 0.84419 0.0 0.0 1148.6860705921265 0.0 1148.6860705921265 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.84419 - 17 + 1 2.062 72966.1 0.4300000071525574 4970 3560 8512 DOHH2_400M_050219_1,8532 DOHH2_400M_050219_1,8532,NSHLIVHKRIH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8534 48.234 99.0 580020.0 25 0 73596.0 + 539 AEIEDIRVL 9 75 529.297385596076 0 529.2971679568291 PEAK CID FTMS 0 0 0 8533 47025.53515625 0.0655878982900529 2 -0.1893730163574218 1 Unmodified _AEIEDIRVL_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B 17.11289562659939 0.230679707888486 1 {I|L}P{I|L} 3 7 16.198 0.0 0.0 1.533 0.0 0.0 293.1935005530148 437.14316345589015 730.3366640089049 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}P{I|L} 1.533 - 33 + 1 2.062 47978.5 1.0 4971 3561 8533 DOHH2_400M_050219_1,8534 DOHH2_400M_050219_1,8534,AEIEDIRVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8535 48.246 708.0 180160.0 25 0 19992.0 + 38510 TSLIRESKEL 10 140 588.335371774823 1174.656190616446 2 588.3364135622978 MULTI CID FTMS 0 0 0 8533 131333.171875 0.3057554681745706 2 -0.1893730163574218 2 Unmodified _TSLIRESKEL_ REV__ENST00000397149.3_1_9:33057678-33060557:-|nuORF 4.897010918128616 0.7039849508293987 1 Y 1 -1 12.218 0.0 0.0 1.0402 0.0 0.0 993.582214031288 0.0 993.582214031288 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0402 - 62 + 1 2.062 99543.2 1.0 4972 3561 8533 DOHH2_400M_050219_1,8535 DOHH2_400M_050219_1,8535,TSLIRESKEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8536 48.247 23.0 2390100.0 25 0 208430.0 + 32820 SEFTGVWKY 9 89 558.7704886853638 1115.5264244375276 2 558.7711669802666 MULTI CID FTMS 0 0 0 8533 1549843.5 1.0 0 0.0 3 Unmodified _SEFTGVWKY_ ENSG00000249915|ENST00000264933|PDCD6;ENST00000505526.1_1_5:271863-311637:+|nuORF;nc|ENSG00000249915|O75340-2|PDCD6 22.736283301280096 0.2418982879461534 1 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TRWKY 8 2 + 40.865 0.0 0.0 3.6633 3.6633 80.707 0.0 0.0 0.0 25.19077524932108 11.40978057358332 11.40978057358332 9.262137858390812 0 0.5 0.0 0.0 0.25 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TRWKY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T[VG]WKY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TR[YK]W;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TAA{[CP]|[EA]}KY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T[VG][YK]W;{[ES]|[DT]|[{I|L}C]}[VS]{[MS]|[{M(Oxidation (M))|F}A]}WKY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{[ET]|[MV]} 3.6633;2.833;2.5679;1.7377;1.7376;1.5798;1.3367 -;+;-;-;-;-;- + 230 + 1 2.062 45653.7 1.0 4973 3561 8533 DOHH2_400M_050219_1,8536 DOHH2_400M_050219_1,8536,SEFTGVWKY False True SEFTGVWKY 48.247271 558.771166980267 17708414.0 8533.0 ENSG00000249915|ENST00000264933|PDCD6;;nc|ENSG00000249915|O75340-2|PDCD6;;ENST00000505526.1_1_5:271863-311637:+|nuORF 6.128508408864339 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8537 48.251 198.0 514470.0 25 0 46991.0 -1 0 103 1035.1625290806987 3102.4657578422966 3 1035.497729480267 MULTI CID FTMS 0 0 0 8533 811544.125 0.8103450169611517 -1 0.124237060546875 4 1 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NP]{I|L}VM{[QD]|[EN]|[WG]|[KD]|[RS]} 10 -1 30.876 0.0 0.0 0.99521 0.0 0.0 1911.925584861525 0.0 1911.925584861525 0.0 12.244138279169224 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.4247425010840047 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NP]{I|L}VM{[QD]|[EN]|[WG]|[KD]|[RS]} 0.99521 - 9397 1 2.062 75853.5 1.0 4974 3561 8533 DOHH2_400M_050219_1,8537 DOHH2_400M_050219_1,8537, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8538 48.253 112.0 279180.0 25 0 37126.0 + 10757 FYKQVIRQLT 10 66 648.3746445009378 1294.7347360686756 2 648.3747436404228 MULTI CID FTMS 0 0 0 8533 460905.375 1.0 0 0.0 5 Unmodified _FYKQVIRQLT_ REV__ENSG00000128641|ENST00000392318|MYO1B;REV__nc|ENSG00000128641|O43795-2|MYO1B 3.2813086475875832 0.7114585191678878 1 Y 1 -1 12.764 0.0 0.0 0.98586 0.0 0.0 1113.6604390489474 0.0 1113.6604390489474 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.98586 + + 5 + 1 2.062 32891.8 1.0 4975 3561 8533 DOHH2_400M_050219_1,8538 DOHH2_400M_050219_1,8538,FYKQVIRQLT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8539 48.255 83.0 909360.0 25 0 109550.0 + + 19638 ISDRLIGIY 9 84 525.3031720233756 1048.5917911135512 2 525.3038207888603 MULTI CID FTMS 0 0 0 8533 467651.5625 0.6988741032348972 -1 0.124237060546875 6 Unmodified _LGFLGPLGIY_ ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4 32.116972079565 0.2470863257317063 1 {[TV]|[{I|L}S]}[RD]{I|L}{I|L}G{I|L}Y 9 -1 + 42.118 0.0 0.0 4.0166 4.0166 73.839 0.0 0.0 0.0 5.179921580021087 10.933418629199402 5.179921580021087 3.010299956639805 0 0.8807196863200843 0.9208187539523752 0.0 0.0 {[TV]|[{I|L}S]}[RD]{I|L}{I|L}G{I|L}Y;{[TV]|[{I|L}S]}[RD]{I|L}G{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RR[TP]{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RR{I|L}[TP]Y 4.0166;3.7296;2.9433;2.4883 -;-;-;- 70 1 2.062 62298.6 1.0 4976 3561 8533 DOHH2_400M_050219_1,8539 DOHH2_400M_050219_1,8539,LGFLGPLGIY False False ISDRLIGIY 48.255342 525.30382078886 7138246.5 8533.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 4.6782097816467285 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8540 48.257 84.0 739440.0 25 0 95387.0 + 15798 ISESHPILY 9 80 529.7791052056006 1057.543657478001 2 529.7795898318291 MULTI CID FTMS 0 0 0 8533 396552.375 0.2795737292862302 -2 0.2327041625976562 7 Unmodified _ISESHPILY_ ENSG00000019102|ENST00000326621|VSIG2;nc|ENSG00000019102|Q96IQ7-2|VSIG2 26.88365393820708 0.1891292719743517 1 {NN|[MP]|[D{I|L}]|[EV]}[HT]SP{I|L}{I|L}Y 9 4 + 59.159 0.0 0.0 5.594 5.594 89.293 0.0 0.0 0.0 9.778930903698182 46.9408341705779 9.778930903698182 15.228787452803374 0 1.0 1.5228787452803376 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}[HT]SP{I|L}{I|L}Y;[H{I|L}]{[ES]|[DT]|[{I|L}C]}SP{I|L}{I|L}Y;{[CT]|[{M(Oxidation (M))|F}G]}[YV]SP{I|L}{I|L}Y 5.594;4.154;3.8694 -;-;- 111 1 2.062 53987.4 1.0 4977 3561 8533 DOHH2_400M_050219_1,8540 DOHH2_400M_050219_1,8540,ISESHPILY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8541 48.26 153.0 390700.0 25 0 54935.0 + 33757 SLAQFEQKW 9 96 568.7908419507871 1135.5671309683742 2 568.7908203005791 MULTI CID FTMS 0 0 0 8533 308796.5625 1.0 0 0.0 8 Unmodified _SLAQFEQKW_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 69.10491478415734 0.0214449631113747 1 {[TV]|[{I|L}S]}AQ{M(Oxidation (M))|F}EQKW 9 0 + 84.892 0.0 0.0 7.4758 7.4758 91.834 0.0 0.0 0.0 58.90215041192178 11.706962271689749 11.706962271689749 9.208187539523747 0 0.8494850021680094 2.0 0.7302046884880937 1.305462187404089 + + {[TV]|[{I|L}S]}AQ{M(Oxidation (M))|F}EQKW;{[TV]|[{I|L}S]}AQ{M(Oxidation (M))|F}E[AG]KW;{[TV]|[{I|L}S]}A[AG]{M(Oxidation (M))|F}EQKW;{[TV]|[{I|L}S]}A[AG]{M(Oxidation (M))|F}E[AG]KW;{[TV]|[{I|L}S]}AQ{M(Oxidation (M))|F}[KG]{[CP]|[EA]}W;{[TV]|[{I|L}S]}YPE{M(Oxidation (M))|F}Q[RP];{[TV]|[{I|L}S]}YPE{M(Oxidation (M))|F}[AG][RP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[KG]{M(Oxidation (M))|F}Q[RP];{[TV]|[{I|L}S]}A{[{M(Oxidation (M))|F}D]|MM}[WK]A[KA];{[TV]|[{I|L}S]}A{[WN]|[YH]}[{M(Oxidation (M))|F}E]A[KA] 7.4758;6.6649;6.6649;5.8578;5.7427;5.1703;3.9191;3.0469;2.9958;2.9958 +;-;-;-;-;-;-;-;-;- + 477 + 1 2.062 49271.5 1.0 4978 3561 8533 DOHH2_400M_050219_1,8541 DOHH2_400M_050219_1,8541,SLAQFEQKW True True SLAQFEQKW 48.260284 568.790820300579 1507830.125 8533.0 ENST00000394768.6_2_14:64542710-64692241:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2;;nc|ENSG00000054654|Q8WXH0-7|SYNE2 8.344684282938639 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8542 48.266 287.0 423120.0 25 0 30169.0 -1 0 119 974.9620730415996 1947.9095931499992 2 974.9635497927666 MULTI CID FTMS 0 0 0 8533 290142.84375 0.3618751071351817 -2 0.2327041625976562 9 1 [NP]{I|L}N{M(Oxidation (M))|F}H[{I|L}V]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 17 -1 + 92.761 0.0 0.0 4.7621 4.7621 81.156 0.0 0.0 0.0 4.685210829577457 56.629046940280766 4.685210829577457 7.603356682352924 0 1.7856668758921828 0.0 0.805462187404089 1.7786596949921218 [NP]{I|L}N{M(Oxidation (M))|F}H[{I|L}V]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q{[TV]|[{I|L}S]};[NP]{I|L}N{M(Oxidation (M))|F}H[{I|L}V][AG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}H[{I|L}V]QDAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}H[{I|L}V]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}H[{I|L}V]QDAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}H[{I|L}V]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}H[{I|L}V]QDA[YG]S{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}H[{I|L}V]QDYKS{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}H[{I|L}V]QDYQS{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 4.7621;4.3717;4.3001;4.3001;4.3001;4.3001;4.081;4.0699;4.0317;4.0317 -;-;-;-;-;-;-;-;-;- 8591 1 2.062 84541.5 1.0 4979 3561 8533 DOHH2_400M_050219_1,8542 DOHH2_400M_050219_1,8542, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8543 48.269 175.0 533760.0 25 0 57025.0 + 14764 ILDKESLLY 9 126 547.3104500088773 1092.6063470845545 2 547.3101684451103 MULTI CID FTMS 0 0 0 8533 158942.46875 0.1716126986457799 -2 0.2327041625976562 10 Unmodified _ILDKESLLY_ REV__ENSG00000101194|ENST00000370351|SLC17A9;REV__nc|ENSG00000101194|Q9BYT1-2|SLC17A9 35.61225514009592 0.0995432151795903 1 {[TV]|[{I|L}S]}G{I|L}VTD{I|L}{I|L}Y 10 -1 + 69.686 0.0 0.0 6.3779 6.3779 79.797 0.0 0.0 0.0 3.794934551318079 15.026975159433526 3.794934551318079 1.2050654486819212 0 1.274227503252014 1.0969100130080565 1.16944517631652 0.0 {[TV]|[{I|L}S]}G{I|L}VTD{I|L}{I|L}Y;{[TV]|[{I|L}S]}G{I|L}VES{I|L}{I|L}Y;{[TV]|[{I|L}S]}GV{I|L}TD{I|L}{I|L}Y;{[TV]|[{I|L}S]}GV{I|L}ES{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}{I|L}KTD{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}{I|L}KES{I|L}{I|L}Y;{[TV]|[{I|L}S]}G{I|L}VTEV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}TD{I|L}{I|L}Y;{[TV]|[{I|L}S]}GTDV{I|L}{I|L}{I|L}Y;{[TV]|[{I|L}S]}G{I|L}VETV{I|L}Y 6.3779;6.2677;6.1749;6.0646;6.0306;5.9203;5.677;5.6664;5.5876;5.5667 -;-;-;-;-;-;-;-;-;- 2052 1 2.062 73537.7 1.0 4980 3561 8533 DOHH2_400M_050219_1,8543 DOHH2_400M_050219_1,8543,ILDKESLLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8544 48.277 435.0 435960.0 25 0 59827.0 + 44046 YILPKNVL 8 125 480.2998891001834 958.5852252671668 2 480.2995788455009 MULTI CID FTMS 0 0 0 8533 139194.390625 0.1860071307277254 -2 0.2327041625976562 11 Unmodified _YILPKNVL_ ENSG00000174231|ENST00000304992|PRPF8;ENST00000575116.1_1_17:1555319-1557183:-|nuORF;ENST00000576585.1_1_17:1556769-1557303:-|nuORF 40.44857923139169 0.2267865117615937 1 [Y{I|L}]{I|L}PK{[NV]|[RG]}{I|L} 8 0 + 46.014 0.0 0.0 4.8002 4.8002 84.945 0.0 0.0 0.0 13.54786736677496 5.691446804494909 5.691446804494909 10.148839045695006 0 0.7134679910804405 2.0 0.0 0.3807196863200844 + + [Y{I|L}]{I|L}PK{[NV]|[RG]}{I|L};[KP]NV{I|L}{I|L}Y{I|L};[{I|L}P]KNV{I|L}Y{I|L};[KP]GGV{I|L}{I|L}Y{I|L};[KP]N{I|L}V{I|L}Y{I|L};[KG][PG]V{I|L}{I|L}Y{I|L};[KP]{I|L}NV{I|L}Y{I|L};[{I|L}P]KGGV{I|L}Y{I|L};[KP]GG{I|L}V{I|L}Y{I|L};{[NV]|[RG]}[KP]{I|L}{I|L}Y{I|L} 4.8002;3.7414;3.1671;2.7752;2.7741;2.4612;2.46;2.2009;1.8078;1.7854 +;-;-;-;-;-;-;-;-;- + 261 + 1 2.062 148222.8 1.0 4981 3561 8533 DOHH2_400M_050219_1,8544 DOHH2_400M_050219_1,8544,YILPKNVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8545 48.291 800.0 167080.0 25 0 15251.0 -1 AELCPDRCIHR 11 127 713.8356069871891 1425.656661041178 2 714.3380004763603 MULTI CID FTMS 0 0 0 8533 114494.53125 0.7448221814736962 3 -0.2937660217285156 12 2 Carbamidomethyl (C) _AELC(Carbamidomethyl (C))PDRC(Carbamidomethyl (C))IHR_ ENST00000525858.5_1_11:65429156-65430414:-|nuORF;ENST00000532776.5_1_11:65429156-65429483:-|nuORF;ENST00000534305.1_1_11:65429156-65429584:-|nuORF 7.101721422024254 0.8416415510090076 1 [EP]GYVAP{[CA]|SS}QP{I|L} 12 -1 65.517 0.0 0.0 4.5956 0.0 0.0 0.0 197.05227578224404 197.05227578224404 49.90539265348001 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.5752574989159953 0.0 [EP]GYVAP{[CA]|SS}QP{I|L} 4.5956 - 2028 1 2.062 100158.1 0.6399999856948853 4982 3561 8533 DOHH2_400M_050219_1,8545 DOHH2_400M_050219_1,8545,AELCPDRCIHR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8546 48.304 800.0 210870.0 25 0 13539.0 + 33014 SENPWMTEY 9 174 578.7352453728049 0 578.7361328005791 PEAK CID FTMS 0 0 0 8533 105887.2578125 0.5417560761830635 -1 0.124237060546875 13 Unmodified _SENPWMTEY_ ENSG00000154429|ENST00000284617|CCSAP;ENST00000483092.1_1_1:229460984-229462796:-|nuORF;nc|ENSG00000154429|Q6IQ19-2|CCSAP 51.629811660486645 0.0272106947810716 1 YDP 3 8 13.812 0.0 0.0 1.1954 0.0 0.0 202.03267228682225 575.2613009088499 777.2939731956722 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YDP 1.1954 - 315 + 1 2.062 127110.6 0.550000011920929 4983 3561 8533 DOHH2_400M_050219_1,8546 DOHH2_400M_050219_1,8546,SENPWMTEY True True SENPWMTEY 48.3044 578.736132800579 1499980.75 8533.0 ENSG00000154429|ENST00000284617|CCSAP;;ENST00000483092.1_1_1:229460984-229462796:-|nuORF;;nc|ENSG00000154429|Q6IQ19-2|CCSAP 5.369578679402669 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8547 48.311 299.0 188110.0 25 0 17895.0 29067 QELAQELLY 9 104 553.7911418527591 0 553.7911865115166 PEAK CID FTMS 0 0 0 8533 89391.546875 0.9060614346394912 -1 0.124237060546875 14 Unmodified _QELAQELLY_ ENSG00000164077|ENST00000296473|MON1A;ENST00000486107.5_1_3:49947550-49967319:-|nuORF;nc|ENSG00000164077|Q86VX9-2|MON1A;nc|ENSG00000164077|Q86VX9-3|MON1A;nc|ENSG00000164077|Q86VX9-4|MON1A;nc|ENSG00000164077|Q86VX9|MON1A 29.081581746732265 0.1187435359889091 1 E{I|L}Q 3 6 15.674 0.0 0.0 1.4177 0.0 0.0 535.3012645631369 197.0571230524047 732.3583876155416 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6861818737241735 E{I|L}Q 1.4177 - 85 + 1 2.062 47573.0 1.0 4984 3561 8533 DOHH2_400M_050219_1,8547 DOHH2_400M_050219_1,8547,QELAQELLY True True AEQIIQEIY 48.311352 553.791186511517 1359501.125 8533.0 ENST00000461139.5_1_3:53259774-53265639:-|nuORF;;nc|ENSG00000163931|P29401-2|TKT;;ENSG00000163931|ENST00000462138|TKT;;ENST00000460343.5_1_3:53261754-53265639:-|nuORF 4.684305191040039 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8548 48.314 105.0 639610.0 25 0 92582.0 + 42929 VVRLQTPPWAP 11 80 632.3612218989651 1262.7078908647302 2 632.3613159060478 MULTI CID FTMS 0 0 0 8533 389873.3125 1.0 0 0.0 15 Unmodified _VVRLQTPPWAP_ REV__ENST00000590421.1_1_17:59470996-59476834:-|nuORF;REV__ENST00000591313.5_1_17:59471037-59476771:-|nuORF 3.2813086475875832 0.8596665074481906 1 C 1 -1 3.9794 0.0 0.0 0.31515 0.0 0.0 564.3339159478921 592.3505953424436 1156.6845112903356 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.31515 - 17 + 1 2.062 57238.7 1.0 4985 3561 8533 DOHH2_400M_050219_1,8548 DOHH2_400M_050219_1,8548,VVRLQTPPWAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8549 48.315 71.0 967030.0 25 0 219680.0 9691 FLRVRANR 8 75 516.3142475947946 1030.613942256389 2 516.3151122927666 MULTI CID FTMS 0 0 0 8533 179747.96875 0.063360811291923 -2 0.2327041625976562 16 Unmodified _FLRVRANR_ ENSG00000187147|ENST00000361799|RNF220;ENST00000475378.5_1_1:45097966-45116444:+|nuORF;nc|ENSG00000187147|Q5VTB9-3|RNF220 0.6903765706972694 0.8201419426409876 1 A 1 7 0.27759 0.0 0.0 0.026934 0.0 0.0 792.4714079319734 164.0768984430297 956.5483063750032 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.026934 + + 3 + 1 2.062 58525.9 1.0 4986 3561 8533 DOHH2_400M_050219_1,8549 DOHH2_400M_050219_1,8549,FLRVRANR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8551 48.32 22.0 2416200.0 25 0 410410.0 + 33575 SINDKIIEL 9 79 522.8003160677929 1043.5860792023857 2 522.8007079958916 MULTI CID FTMS 0 0 0 8550 1893700.375 0.4029303190483212 1 -0.1030960083007812 1 Unmodified _SINDKIIEL_ ENSG00000072310|ENST00000261646|SREBF1;ENSG00000198911|ENST00000361204|SREBF2;ENST00000470247.1_1_17:17721556-17722545:-|nuORF;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1;nc|ENSG00000198911|Q12772-2|SREBF2 34.93206674587334 0.1032771302489716 1 {[TV]|[{I|L}S]}NR{I|L}S{I|L} 7 4 54.71 0.0 0.0 5.2425 0.0 0.0 0.0 257.11040716552947 257.11040716552947 38.02719441874381 0.0 0.0 0.0 0 0.8182503180159344 2.0 0.8494850021680094 0.3807196863200844 {[TV]|[{I|L}S]}NR{I|L}S{I|L} 5.2425 - 178 1 2.062 46188.5 1.0 4987 3562 8550 DOHH2_400M_050219_1,8551 DOHH2_400M_050219_1,8551,SINDKIIEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8552 48.321 31.0 1129300.0 25 0 304870.0 + 30929 RKFIYRAVWA 10 60 655.3823448852442 1308.7501368372882 2 655.3826782107353 MULTI CID FTMS 0 0 0 8550 1948122.625 1.0 0 0.0 2 Unmodified _RKFIYRAVWA_ REV__ENSG00000111684|ENST00000261407|LPCAT3;REV__nc|ENSG00000111684|Q6P1A2-2|LPCAT3 0.4583401331227399 0.7245164002484112 1 K 1 -1 0.48455 0.0 0.0 0.037024 0.0 0.0 938.532224094904 239.09290491275627 1177.6251290076602 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.037024 + + 2 + 1 2.062 40278.0 1.0 4988 3562 8550 DOHH2_400M_050219_1,8552 DOHH2_400M_050219_1,8552,RKFIYRAVWA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8553 48.324 106.0 615800.0 25 0 64644.0 + 280 GEIDTRFSF 9 80 536.2557330937954 1070.4969132543906 2 536.2587158083916 MULTI CID FTMS 0 0 0 8550 400379.15625 0.1864752554620439 -6 0.7633743286132812 3 Unmodified _ADLDCDPILP_ ENSG00000137955|ENST00000319942|RABGGTB 18.1463463914782 0.5430639438673815 1 {[DA]|[EG]}{I|L}DT 5 6 45.317 0.0 0.0 4.2333 0.0 0.0 0.0 552.2570284479124 552.2570284479124 28.621506059964545 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3807196863200844 0.0 {[DA]|[EG]}{I|L}DT 4.2333 - 40 + 1 2.062 54333.1 1.0 4989 3562 8550 DOHH2_400M_050219_1,8553 DOHH2_400M_050219_1,8553,ADLDCDPILP False False GEIDTRFSF 48.323518 536.258715808392 3405005.0 8550.0 ENSG00000137955|ENST00000319942|RABGGTB 4.680027484893799 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8554 48.327 151.0 293430.0 25 0 49838.0 + -1 LYCLAFVLLVV 11 72 437.2573309892541 1308.7501635679623 3 437.2570678591728 MULTI CID FTMS 0 0 0 8550 364684.4375 1.0 0 0.0 4 Carbamidomethyl (C) _LYC(Carbamidomethyl (C))LAFVLLVV_ REV__ENSG00000121764|ENST00000403528|HCRTR1 0.5059551277355931 0.8727608062196215 1 H 1 -1 0.9691 0.0 0.0 0.074048 0.0 0.0 889.5212034622967 279.1451510065063 1168.666354468803 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.074048 - 6 + 1 2.062 50592.4 1.0 4990 3562 8550 DOHH2_400M_050219_1,8554 DOHH2_400M_050219_1,8554,LYCLAFVLLVV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8555 48.34 800.0 167120.0 25 0 38697.0 + 6756 EDTLRKKHTLL 11 139 677.3957656925392 1352.7769784518782 2 677.3962280154228 MULTI CID FTMS 0 0 0 8550 204542.75 0.3407311298925224 4 -0.5021896362304688 5 Unmodified _EDTLRKKHTLL_ REV__ENSG00000111199|ENST00000261740|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-2|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-3|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-4|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-5|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-6|TRPV4 3.2813086475875832 0.8596665074481906 1 WM 2 -1 10.969 0.0 0.0 0.81086 0.0 0.0 358.3096455434782 674.3353365533811 1032.6449820968594 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WM 0.81086 - 243 + 1 2.062 111466.9 0.7900000214576721 4991 3562 8550 DOHH2_400M_050219_1,8555 DOHH2_400M_050219_1,8555,EDTLRKKHTLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8556 48.354 800.0 114350.0 25 0 41716.0 + 30938 RKKKKTESKIY 11 95 704.9352481985895 1407.855943463979 2 704.9348632693291 MULTI CID FTMS 0 0 0 8550 154425.484375 0.9536535957197654 -1 0.0862770080566406 6 Unmodified _RKKKKTESKIY_ REV__ENST00000504771.2_1_5:118690519-118690582:+|nuORF 0.3506318815782774 0.8734936314171269 1 Y 1 -1 11.259 0.0 0.0 0.79973 0.0 0.0 1226.781692220618 0.0 1226.781692220618 0.0 8.410794239679152 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.79973 + + 19 + 1 2.062 72591.0 0.6899999976158142 4992 3562 8550 DOHH2_400M_050219_1,8556 DOHH2_400M_050219_1,8556,RKKKKTESKIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8557 48.366 667.0 231780.0 25 0 19345.0 + 32588 SAVGHVFSL 9 164 458.7477412136735 915.480929494147 2 458.7477599978447 MULTI CID FTMS 0 0 0 8550 125141.1796875 0.9139553481898824 -1 0.0862770080566406 7 Unmodified _SAVGHVFSL_ ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA 61.357469665136826 0.0253304979873734 1 [HV]GV{M(Oxidation (M))|F}SAS{I|L} 9 5 + 68.134 0.0 0.0 7.4424 7.4424 88.107 0.0 0.0 0.0 7.212463990471704 12.890130921188046 7.212463990471704 6.1665018407422 0 0.8252574989159953 0.721246399047171 0.805462187404089 0.0 [HV]GV{M(Oxidation (M))|F}SAS{I|L};[HV]GVAS{M(Oxidation (M))|F}S{I|L};[HV]G{M(Oxidation (M))|F}VSAS{I|L};{[HG]|PP}VV{M(Oxidation (M))|F}SAS{I|L};[HV]G{M(Oxidation (M))|F}SVAS{I|L};[HV]GV{M(Oxidation (M))|F}ASS{I|L};[HV]GVAYAS{I|L};[HV]K{M(Oxidation (M))|F}DAS{I|L};{[SA]|[TG]}V[RH]{M(Oxidation (M))|F}S{I|L};{[HG]|PP}VVAS{M(Oxidation (M))|F}S{I|L} 7.4424;6.7688;6.6789;6.6546;6.4183;6.215;6.1697;6.0771;6.0344;5.981 -;-;-;-;-;-;-;-;-;- 839 1 2.062 123350.5 1.0 4993 3562 8550 DOHH2_400M_050219_1,8557 DOHH2_400M_050219_1,8557,SAVGHVFSL True True SAVGHVFSL 48.365814 458.747759997845 917847.8125 8550.0 nc|ENSG00000164944|Q69YN4-4|VIRMA;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA 5.8598073323567705 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8558 48.38 800.0 217160.0 25 0 26002.0 2429 AQRERLQIPGL 11 144 640.8752188239353 1279.7358847146704 2 640.8763305544853 MULTI CID FTMS 0 0 0 8550 112730.4375 1.0 0 0.0 8 Unmodified _AQRERLQIPGL_ nc|ENSG00000069020|O15021-6|MAST4 5.296884461304476 0.8501568894076437 1 TDD 3 11 12.307 0.0 0.0 0.96169 0.0 0.0 146.2571992672079 799.3533419244749 945.6105411916828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TDD 0.96169 - 111 + 1 2.062 132695.5 0.5899999737739563 4994 3562 8550 DOHH2_400M_050219_1,8558 DOHH2_400M_050219_1,8558,AQRERLQIPGL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8559 48.393 800.0 200900.0 25 0 10727.0 + -1 EQNMRSQMMS 10 144 637.2524200459443 1272.4902871586885 2 637.2535278201103 MULTI CID FTMS 0 0 0 8550 90920.1640625 0.370842954835908 -1 0.0862770080566406 9 2 Oxidation (M) _EQNM(Oxidation (M))RSQM(Oxidation (M))MS_ REV__ENSG00000183310|ENST00000328782|OR2T34;REV__ENSG00000196539|ENST00000359594|OR2T3 13.90604991867851 0.6142120002215601 1 [AG]NEQWVT 8 -1 62.45 0.0 0.0 4.9077 0.0 0.0 0.0 384.06466394995726 384.06466394995726 34.91724021238182 0.0 0.0 0.0 0 1.424742501084005 1.0457574905606752 2.1307196863200843 1.9049471895720984 [AG]NEQWVT 4.9077 - 2742 1 2.062 120944.5 0.550000011920929 4995 3562 8550 DOHH2_400M_050219_1,8559 DOHH2_400M_050219_1,8559,EQNMRSQMMS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8560 48.397 75.0 549100.0 25 0 152230.0 + 1937 AMKKLLIIFSY 11 66 663.8958194908566 1325.7770860485132 2 663.8956176638603 MULTI CID FTMS 0 0 0 8550 715699.75 0.9162098030930732 -1 0.0862770080566406 10 Unmodified _AMKKLLIIFSY_ REV__ENSG00000188869|ENST00000359440|TMC3;REV__ENST00000559982.1_1_15:81630174-81666445:-|nuORF;REV__nc|ENSG00000188869|Q7Z5M5-2|TMC3 1.1933415558491238 0.8695176722560516 1 K 1 -1 1.5938 0.0 0.0 0.12022 0.0 0.0 867.5084530912851 327.1455172174438 1194.653970308729 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.12022 + + 1 + 1 2.062 44246.6 1.0 4996 3562 8550 DOHH2_400M_050219_1,8560 DOHH2_400M_050219_1,8560,AMKKLLIIFSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8561 48.405 442.0 293450.0 25 0 109390.0 20508 LLLLLFKDR 9 87 565.8664152918934 1129.7182776505867 2 565.8666869997978 MULTI CID FTMS 0 0 0 8550 121798.4609375 0.3178948490123121 -1 0.0862770080566406 11 Unmodified _LLLLLFKDR_ ENST00000395900.1_1_11:32460303-32460420:+|nuORF 0.6014990680409731 0.8936861360942873 1 Y 1 9 12.764 0.0 0.0 1.1299 0.0 0.0 948.6438585605462 0.0 948.6438585605462 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1299 - 4 + 1 2.062 96765.2 1.0 4997 3562 8550 DOHH2_400M_050219_1,8561 DOHH2_400M_050219_1,8561,LLLLLFKDR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8562 48.418 800.0 83048.0 25 0 18852.0 + 28150 PPQPKHKVRRQ 11 94 685.9091353134543 1369.8037176937084 2 685.9077636599541 MULTI CID FTMS 0 0 0 -1 0 12 Unmodified _PPQPKHKVRRQ_ REV__ENSG00000163873|ENST00000373091|GRIK3 2.9952420565917617 0.861016188266951 1 Y 1 -1 12.218 0.0 0.0 0.89199 0.0 0.0 1188.7295122267146 0.0 1188.7295122267146 0.0 2.6855959219747394 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.89199 - 17 + 1 2.062 56811.3 0.5600000023841858 4998 3562 8550 DOHH2_400M_050219_1,8562 DOHH2_400M_050219_1,8562,PPQPKHKVRRQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8564 48.423 89.0 363490.0 25 0 32547.0 + 6921 EEFQKELSQW 10 68 662.3144581625755 1322.614363391951 2 662.3148071169853 MULTI CID FTMS 0 0 0 8563 388031.625 0.1249757335747401 2 -0.2555961608886719 1 Unmodified _EEFQKELSQW_ ENSG00000100109|ENST00000407690|TFIP11 10.315234532428624 0.6744623947628824 1 EE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KEAW 10 3 + 30.111 0.0 0.0 2.2766 2.2766 80.712 0.0 0.0 0.0 6.974987195809419 4.98843818062257 4.98843818062257 22.461987796517704 0 0.4247425010840047 1.3979400086720375 0.0 0.0 EE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KEAW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HC] 2.2766;0.57833 -;- 101 + 1 2.062 29817.2 1.0 4999 3563 8563 DOHH2_400M_050219_1,8564 DOHH2_400M_050219_1,8564,EEFQKELSQW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8565 48.425 95.0 616530.0 25 0 86587.0 + 7422 EGLPKPLTL 9 85 484.2947371486141 966.574921364028 2 484.2949096560478 MULTI CID FTMS 0 0 0 8563 515312.46875 0.5587925349921397 2 -0.2555961608886719 2 Unmodified _EGLPKPLTL_ ENSG00000206503|ENST00000376809|HLA-A;ENSG00000234745|ENST00000412585|HLA-B;ENST00000495183.5_1_6:29910749-29913287:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;nc|ENSG00000206503|P04439-2|HLA-A 52.268347100219714 0.0353964759249114 1 {[DA]|[EG]}{I|L}PK[{I|L}P]T{I|L} 9 0 {[DA]|[EG]}{I|L} + + 31.916 14.507 4.8495 3.302 3.302 51.198 0.0 0.0 0.0 0.0 11.911225100727592 0.0 0.0 0 0.3494850021680094 0.0 1.079689690656103 0.0 + + {[DA]|[EG]}{I|L}PK[{I|L}P]T{I|L} 3.302 + + 179 + 1 2.062 52294.4 1.0 5000 3563 8563 DOHH2_400M_050219_1,8565 DOHH2_400M_050219_1,8565,EGLPKPLTL True True EGLPKPLTL 48.425232 484.294909656048 22142602.5 8563.0 ENSG00000234745|ENST00000412585|HLA-B;;ENSG00000206503|ENST00000376809|HLA-A;;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;;chr6:29928328-30009145|17|27.82|0.56|5.62|+|2|HLA-K,HLA-J|1;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;;chr6:30546058-31355317|14|15.71|0.03|9.1|-|2|None,HLA-B|1;;ENST00000495183.5_1_6:29910749-29913287:+|nuORF;;chr6:31354526-31355317|14|59.0|0.97|5.92|-|2|HLA-B,HLA-B|1 6.1059824625651045 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8566 48.426 32.0 1816300.0 25 0 364810.0 20908 LMVVVIVLY 9 75 524.8273819803948 1047.6402110275894 2 524.8276855349541 MULTI CID FTMS 0 0 0 8563 1621967.375 1.0 0 0.0 3 Unmodified _LMVVVIVLY_ ENSG00000103546|ENST00000568943|SLC6A2;nc|ENSG00000103546|P23975-2|SLC6A2;nc|ENSG00000103546|P23975-3|SLC6A2 5.230669730166228 0.7320841359114558 1 Y 1 8 14.604 0.0 0.0 1.394 0.0 0.0 866.566066595752 0.0 866.566066595752 0.0 6.645293596321125 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.394 + + 9 + 1 2.062 51375.2 1.0 5001 3563 8563 DOHH2_400M_050219_1,8566 DOHH2_400M_050219_1,8566,LMVVVIVLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8567 48.432 305.0 459680.0 25 0 99305.0 28212 PQLLVQVRI 9 105 533.3405604049213 1064.6665678766426 2 533.3408080935478 MULTI CID FTMS 0 0 0 8563 571994.625 1.0 0 0.0 4 Unmodified _PQLLVQVRI_ ENSG00000215041|ENST00000399464|NEURL4;ENST00000572029.1_1_17:7221711-7224101:-|nuORF;nc|ENSG00000215041|Q96JN8-2|NEURL4 1.844237919475145 0.850302753031785 1 Y 1 9 10.596 0.0 0.0 0.99523 0.0 0.0 883.5923166332817 0.0 883.5923166332817 0.0 0.9918382688341688 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.99523 - 9 + 1 2.062 110283.4 1.0 5002 3563 8563 DOHH2_400M_050219_1,8567 DOHH2_400M_050219_1,8567,PQLLVQVRI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8568 48.435 134.0 698290.0 25 0 66965.0 + 40412 VIFNLSLMIVI 11 89 421.25594444074727 1260.7460039224418 3 421.2560607790947 MULTI CID FTMS 0 0 0 8563 355911.75 0.3756098577710892 -1 0.1030960083007812 5 Unmodified _VIFNLSLMIVI_ REV__ENSG00000127249|ENST00000342695|ATP13A4;REV__nc|ENSG00000127249|Q4VNC1-4|ATP13A4 15.538449434065043 0.7119291465483839 1 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 -1 + 98.516 0.0 0.0 7.8141 7.8141 91.262 0.0 0.0 0.0 80.26667462574304 23.602809003620365 23.602809003620365 9.164539485499247 0 0.5866968715561641 2.0 0.0 1.326348700266608 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR 7.8141;7.0872 -;- 230 + 1 2.062 86817.9 1.0 5003 3563 8563 DOHH2_400M_050219_1,8568 DOHH2_400M_050219_1,8568,VIFNLSLMIVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8569 48.438 186.0 380450.0 25 0 58605.0 + 30495 REFGSVDYW 9 74 579.7642480811103 1157.5139432290205 2 579.7645141482353 MULTI CID FTMS 0 0 0 8563 272609.9375 1.0 0 0.0 6 Unmodified _REFGSVDYW_ ENSG00000010165|ENST00000361735|METTL13;nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13 29.84058131909904 0.1515068451768857 1 GSVDYW 6 3 57.652 0.0 0.0 4.9806 0.0 0.0 432.21309096504064 0.0 432.21309096504064 0.0 43.672137691284405 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + GSVDYW 4.9806 + + 97 1 2.062 58378.9 1.0 5004 3563 8563 DOHH2_400M_050219_1,8569 DOHH2_400M_050219_1,8569,REFGSVDYW False True REFGSVDYW 48.438297 579.764514148235 1600712.875 8563.0 ENSG00000010165|ENST00000361735|METTL13;;nc|ENSG00000010165|Q8N6R0-4|METTL13;;nc|ENSG00000010165|Q8N6R0-1|METTL13 7.0046712557474775 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8570 48.444 327.0 214290.0 25 0 17692.0 + 35247 SSENPWMTEY 10 108 622.250326760124 1242.486100587048 2 622.2508422732353 MULTI CID FTMS 0 0 0 8563 257245.5625 0.2982461721153568 2 -0.2555961608886719 7 Unmodified _SSENPWMTEY_ ENSG00000154429|ENST00000284617|CCSAP;ENST00000483092.1_1_1:229460984-229462796:-|nuORF;nc|ENSG00000154429|Q6IQ19-2|CCSAP 99.7552728972412 0.0086345419122624 1 {[CA]|SS}ENPWM 7 3 37.62 0.0 0.0 3.0278 0.0 0.0 0.0 408.1390296244105 408.1390296244105 -1.809253688010429 0.0 -1.809253688010429 0.0 0 0.8494850021680094 0.0 1.180884548956689 1.110924374808178 + {[CA]|SS}ENPWM 3.0278 + + 855 1 2.062 55086.0 1.0 5005 3563 8563 DOHH2_400M_050219_1,8570 DOHH2_400M_050219_1,8570,SSENPWMTEY True True SSENPWMTEY 48.444251 622.250842273235 13173007.0 8563.0 ENSG00000154429|ENST00000284617|CCSAP;;ENST00000483092.1_1_1:229460984-229462796:-|nuORF;;nc|ENSG00000154429|Q6IQ19-2|CCSAP 7.742669582366943 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8571 48.448 214.0 255890.0 25 0 58513.0 -1 KCKHRRLRFP 10 74 699.4090460504301 1396.80353916766 2 699.4088012576103 MULTI CID FTMS 0 0 0 8563 258856.8125 0.6742794068626833 -1 0.1030960083007812 8 Carbamidomethyl (C) _KC(Carbamidomethyl (C))KHRRLRFP_ ENSG00000185448|ENST00000346193|FAM47A 0.4583401331227399 0.7245164002484112 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.062 51507.8 1.0 5006 3563 8563 DOHH2_400M_050219_1,8571 DOHH2_400M_050219_1,8571,KCKHRRLRFP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8572 48.462 800.0 207730.0 25 0 55860.0 + 12909 GYIKLKKKVA 10 152 574.3796842106606 1146.744815488121 2 574.3799316287041 MULTI CID FTMS 0 0 0 8563 234139.546875 1.0 0 0.0 9 Unmodified _GYIKLKKKVA_ REV__ENST00000527958.5_1_11:117041336-117041564:+|nuORF 1.6526216038709556 0.7189921496796233 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KA]MGE{I|L}SG 10 -1 43.326 0.0 0.0 3.7781 0.0 0.0 0.0 126.23008095126478 126.23008095126478 30.138050198288013 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.7742275032520141 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KA]MGE{I|L}SG 3.7781 - 549 1 2.062 128696.7 0.8199999928474426 5007 3563 8563 DOHH2_400M_050219_1,8572 DOHH2_400M_050219_1,8572,GYIKLKKKVA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8573 48.465 158.0 375280.0 25 0 31445.0 + 33048 SEPVGIYQGF 10 96 548.7694273186446 1095.524301704089 2 548.7701293826103 MULTI CID FTMS 0 0 0 8563 234690.8125 0.7736264872785049 -1 0.1030960083007812 10 Unmodified _SEPVGIYQGF_ ENSG00000163932|ENST00000330452|PRKCD;nc|ENSG00000163932|Q05655-2|PRKCD 43.9818466556824 0.1155196613165264 1 {[ES]|[DT]|[{I|L}C]}PR{I|L}YQG{M(Oxidation (M))|F} 9 2 {[ES]|[DT]|[{I|L}C]}PR{I|L} + + 26.617 10.221 1.7553 2.4297 2.4297 49.362 0.0 0.0 0.0 0.0 -3.7371250542002334 -3.7371250542002334 0.0 0 0.4247425010840047 0.0 0.0 0.5994850021680094 {[ES]|[DT]|[{I|L}C]}PR{I|L}YQG{M(Oxidation (M))|F} 2.4297 - 162 + 1 2.062 51720.5 1.0 5008 3563 8563 DOHH2_400M_050219_1,8573 DOHH2_400M_050219_1,8573,SEPVGIYQGF True True SEPVGIYQGF 48.465272 548.77012938261 2237062.0 8563.0 ENSG00000163932|ENST00000330452|PRKCD;;nc|ENSG00000163932|Q05655-2|PRKCD 6.080402374267578 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8574 48.469 199.0 374750.0 25 0 42103.0 + 25229 MVDPLLTKY 9 104 540.2930274545218 1078.5715019758436 2 540.2937499880791 MULTI CID FTMS 0 0 0 8563 169570.046875 0.6043872709186267 -1 0.1030960083007812 11 Unmodified _MVDPLLTKY_ ENSG00000101452|ENST00000252011|DHX35;nc|ENSG00000101452|Q9H5Z1-2|DHX35 40.23920728925047 0.0741434193262949 1 MVDP{I|L}{I|L}TKY 9 0 + 84.651 0.0 0.0 7.8485 7.8485 97.117 0.0 0.0 0.0 45.345328507057424 11.962724883926654 11.962724883926654 37.05703386994987 0 0.7614393726401688 2.0 0.3494850021680094 0.0 + + MVDP{I|L}{I|L}TKY;[{I|L}P]DVV{I|L}PD[DP];[DV]MP{I|L}{I|L}TKY;[DP]{I|L}VV{I|L}PD[DP];[{I|L}P]D{I|L}VVPD[DP];[{I|L}P]{I|L}DVVPD[DP];[DP]{I|L}{I|L}VVPD[DP];[{I|L}P]{I|L}{[CP]|[EA]}{I|L}PD[DP];[DP]VV{I|L}{I|L}PD[DP];[{I|L}P]DVP[{I|L}V]D[DP] 7.8485;4.4127;3.9027;3.8247;3.6748;3.1166;3.0868;2.9534;2.9235;2.8375 +;-;-;-;-;-;-;-;-;- + 378 + 1 2.062 62060.2 1.0 5009 3563 8563 DOHH2_400M_050219_1,8574 DOHH2_400M_050219_1,8574,MVDPLLTKY True True MVDPLLTKY 48.469093 540.293749988079 1804002.375 8563.0 nc|ENSG00000101452|Q9H5Z1-2|DHX35;;ENSG00000101452|ENST00000252011|DHX35 8.894314765930176 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8575 48.483 800.0 123680.0 25 0 6647.7 + -1 FPWEPRRCRWT 11 125 795.8942451735415 1589.773937413883 2 796.3959228396416 MULTI CID FTMS 0 0 0 8563 128580.1875 0.674320257733868 3 -0.3990936279296875 12 Carbamidomethyl (C) _FPWEPRRC(Carbamidomethyl (C))RWT_ REV__ENST00000316724.9_1_2:127864705-127864909:-|nuORF 10.799506525563784 0.8105043987015127 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}M[TP]NG{M(Oxidation (M))|F}{I|L}QS{I|L} 14 -1 + 90.833 0.0 0.0 5.7136 5.7136 79.74 0.0 0.0 0.0 2.931911566350948 9.99954770413646 2.931911566350948 2.931911566350948 0 1.5317183090963749 0.0 1.2346368802282015 1.7797966019298022 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}M[TP]NG{M(Oxidation (M))|F}{I|L}QS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NA[PS]C{I|L}NG{M(Oxidation (M))|F}{I|L}QS{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}M[TP]{M(Oxidation (M))|F}GN{I|L}QS{I|L};[Q{I|L}]E{I|L}M[TP]NG{M(Oxidation (M))|F}{I|L}QS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]M[TP]NG{M(Oxidation (M))|F}{I|L}QS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NA[PS]C{I|L}{M(Oxidation (M))|F}GN{I|L}QS{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}M[TP]NG{M(Oxidation (M))|F}{I|L}[AG]S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}M[TP]GGG{M(Oxidation (M))|F}{I|L}QS{I|L};{[QN]|[E{I|L}]|[KN]}Q{I|L}M[TP]NG{M(Oxidation (M))|F}{I|L}QS{I|L};[Q{I|L}]E{I|L}M[TP]{M(Oxidation (M))|F}GN{I|L}QS{I|L} 5.7136;5.5292;5.4135;5.3498;5.2392;5.229;5.1443;5.1443;5.1107;5.0497 -;-;-;-;-;-;-;-;-;- 9410 1 2.062 72748.0 0.6000000238418579 5010 3563 8563 DOHH2_400M_050219_1,8575 DOHH2_400M_050219_1,8575,FPWEPRRCRWT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8576 48.498 800.0 121280.0 25 0 27651.0 + 35177 SRSRRRRRER 10 108 707.9227623689919 1413.8309718047838 2 707.9224731326103 MULTI CID FTMS 0 0 0 8563 125635.71875 0.7944798636298783 -2 0.1893730163574218 13 Unmodified _SRSRRRRRER_ REV__ENSG00000116754|ENST00000370949|SRSF11;REV__ENSG00000153914|ENST00000334121|SREK1;REV__ENST00000522214.1_1_5:65470720-65474693:+|nuORF;REV__nc|ENSG00000116754|Q05519-2|SRSF11;REV__nc|ENSG00000153914|Q8WXA9|SREK1 1.4819007175156935 0.719781833666733 1 Y 1 -1 10.278 0.0 0.0 0.72693 0.0 0.0 1232.7566290086884 0.0 1232.7566290086884 0.0 0.6734928694872799 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.72693 - 35 + 1 2.062 85123.3 0.6200000047683716 5011 3563 8563 DOHH2_400M_050219_1,8576 DOHH2_400M_050219_1,8576,SRSRRRRRER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8577 48.509 629.0 131110.0 25 0 13856.0 + 25544 NESDRLVYF 9 123 571.7777433105442 1141.5409336878884 2 571.7772094607353 MULTI CID FTMS 0 0 0 8563 115905.046875 1.0 0 0.0 14 Unmodified _NESDRLVYF_ ENSG00000160505|ENST00000301295|NLRP4;nc|ENSG00000160505|Q96MN2-2|NLRP4;nc|ENSG00000160505|Q96MN2-3|NLRP4 40.23920728925047 0.0741434193262949 1 HDQY{M(Oxidation (M))|F} 5 6 39.851 0.0 0.0 3.491 0.0 0.0 433.249803611525 0.0 433.249803611525 0.0 24.36690318332652 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.3252574989159953 HDQY{M(Oxidation (M))|F} 3.491 - 298 1 2.062 70755.7 1.0 5012 3563 8563 DOHH2_400M_050219_1,8577 DOHH2_400M_050219_1,8577,NESDRLVYF True True NESDRLVYF 48.508932 571.777209460735 678350.5 8563.0 nc|ENSG00000160505|Q96MN2-3|NLRP4;;ENSG00000160505|ENST00000301295|NLRP4;;nc|ENSG00000160505|Q96MN2-2|NLRP4 5.248782316843669 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8578 48.523 800.0 278450.0 25 0 52339.0 -1 0 68 843.1252025331383 3368.471704266153 4 843.6271850466728 MULTI CID FTMS 0 0 0 8563 175945.8125 1.0 0 0.0 15 1 R 1 -1 3.4949 0.0 0.0 0.10375 0.0 0.0 2413.772132588222 795.5670870416624 3209.3392196298846 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.10375 - 5 + 1 2.062 159387.1 0.7099999785423279 5013 3563 8563 DOHH2_400M_050219_1,8578 DOHH2_400M_050219_1,8578, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8580 48.528 39.0 1477700.0 25 0 214460.0 + 35343 STDHIPILY 9 69 529.7791052056006 1057.543657478001 2 529.7800170779228 MULTI CID FTMS 0 0 0 8579 1340891.375 0.9453429758843104 1 -0.1512031555175781 1 Unmodified _STDHIPILY_ ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1 42.09456458481378 0.0639583784996157 1 SP{I|L}{I|L}Y 5 4 54.068 0.0 0.0 5.1126 0.0 0.0 466.2173023908219 0.0 466.2173023908219 0.0 42.28530730395347 0.0 0.0 0 1.0 0.0 0.7614393726401688 0.0 SP{I|L}{I|L}Y 5.1126 - 174 1 2.062 47434.5 1.0 5014 3564 8579 DOHH2_400M_050219_1,8580 DOHH2_400M_050219_1,8580,STDHIPILY True True STDHIPILY 48.527563 529.780017077923 36192513.0 8579.0 ENSG00000198380|ENST00000357308|GFPT1;;nc|ENSG00000198380|Q06210-2|GFPT1 6.279044469197591 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8581 48.529 76.0 603540.0 25 0 67046.0 + 6212 DTKVLEILY 9 80 547.3104500088773 1092.6063470845545 2 547.3103515505791 MULTI CID FTMS 0 0 0 8579 391649.1875 0.4228698252763364 1 -0.1512031555175781 2 Unmodified _DTKVLEILY_ ENSG00000166024|ENST00000298999|R3HCC1L;nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L;nc|ENSG00000166024|Q7Z5L2|R3HCC1L 17.44264345198275 0.3645313841742926 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}ES{I|L}{I|L}Y 9 3 + 53.096 0.0 0.0 4.8595 4.8595 76.186 0.0 0.0 0.0 2.498774732165998 14.973024840566469 2.498774732165998 2.498774732165998 0 1.0 0.0 0.3252574989159953 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}ES{I|L}{I|L}Y;{[TV]|[{I|L}S]}GV{I|L}ES{I|L}{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}ETV{I|L}Y;{[TV]|[{I|L}S]}GV{I|L}ETV{I|L}Y;[{I|L}T]AA{I|L}ES{I|L}{I|L}Y;[{I|L}T][RV]ES{I|L}{I|L}Y;[{I|L}T]AA{I|L}ETV{I|L}Y;{[TV]|[{I|L}S]}WW{I|L}{I|L}{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}{I|L}Y;[{I|L}T][RV]ETV{I|L}Y 4.8595;4.6308;4.584;4.3553;3.637;3.4758;3.3614;3.3514;3.2578;3.2003 -;-;-;-;-;-;-;-;-;- 365 1 2.062 39441.7 1.0 5015 3564 8579 DOHH2_400M_050219_1,8581 DOHH2_400M_050219_1,8581,DTKVLEILY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8582 48.531 55.0 1150200.0 25 0 111540.0 + 8493 ETDLLDIRSEY 11 72 677.330856640168 1352.647160347136 2 677.3307983279228 MULTI CID FTMS 0 0 0 8579 860777.6875 1.0 0 0.0 3 Unmodified _ETDLLDIRSEY_ ENSG00000122359|ENST00000422982|ANXA11;nc|ENSG00000122359|P50995-2|ANXA11 51.487983226225225 0.1093896055713593 1 {NN|[MP]|[D{I|L}]|[EV]}T[HS]{I|L}D{I|L}{I|L}D[DP] 12 7 + 57.532 0.0 0.0 4.2533 4.2533 72.035 0.0 0.0 0.0 8.873949984654246 24.383797645430505 8.873949984654246 1.020599913279625 0 1.392159058960253 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}T[HS]{I|L}D{I|L}{I|L}D[DP];{NN|[MP]|[D{I|L}]|[EV]}TT[HV]D{I|L}{I|L}D[DP];{NN|[MP]|[D{I|L}]|[EV]}{I|L}[YN]Y{I|L}{I|L}D[DP];{[TV]|[{I|L}S]}E[HS]{I|L}D{I|L}{I|L}D[DP];{[TV]|[{I|L}S]}ET[HV]D{I|L}{I|L}D[DP];{[ES]|[DT]|[{I|L}C]}{I|L}[HS]{I|L}D{I|L}{I|L}D[DP];{[ET]|[MV]}V[HS]{I|L}D{I|L}{I|L}D[DP];{[DS]|[MA]|[CV]|TT}{NN|[MP]|[D{I|L}]|[EV]}[HV]D{I|L}{I|L}D[DP];{[QN]|[E{I|L}]|[KN]}S[HS]{I|L}D{I|L}{I|L}D[DP];[DP][{M(Oxidation (M))|F}V]{I|L}[WH]{I|L}D[DP] 4.2533;4.1778;3.5839;3.3995;3.324;3.1769;3.1717;3.142;3.1391;3.1101 -;-;-;-;-;-;-;-;-;- 495 1 2.062 53620.4 1.0 5016 3564 8579 DOHH2_400M_050219_1,8582 DOHH2_400M_050219_1,8582,ETDLLDIRSEY True True ETDLLDIRSEY 48.53074 677.330798327923 5364779.0 8579.0 ENSG00000122359|ENST00000422982|ANXA11;;nc|ENSG00000122359|P50995-2|ANXA11 6.331464767456055 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8583 48.534 148.0 419910.0 25 0 33527.0 -1 0 69 974.9620730415996 1947.9095931499992 2 975.4642822146416 MULTI CID FTMS 0 0 0 8579 579561.6875 0.682384089839049 1 -0.1512031555175781 4 1 RQDANN[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]} 10 -1 60.367 0.0 0.0 3.0991 0.0 0.0 778.374803611525 0.0 778.374803611525 0.0 48.7113751626007 0.0 0.0 0 1.424742501084005 0.0 0.0 1.5228787452803376 RQDANN[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.0991 - 1069 1 2.062 50768.0 1.0 5017 3564 8579 DOHH2_400M_050219_1,8583 DOHH2_400M_050219_1,8583, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8584 48.538 227.0 299140.0 25 0 51512.0 + 16674 KENPLQFKF 9 83 575.8172305671367 1149.6199082010733 2 575.8174316287041 MULTI CID FTMS 0 0 0 8579 254185.5 1.0 0 0.0 5 Unmodified _KENPLQFKF_ ENSG00000092820|ENST00000367075|EZR;ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000137710|P35241-3|RDX;nc|ENSG00000137710|P35241-5|RDX 83.42873516780209 0.0166860047644719 1 [RH]{M(Oxidation (M))|F}Q[{I|L}P]NE 8 8 56.718 0.0 0.0 4.9337 0.0 0.0 0.0 125.07227502994375 125.07227502994375 42.73895634497293 0.0 0.0 0.0 0 2.5356668758921828 0.0 1.0994850021680094 1.274227503252014 [RH]{M(Oxidation (M))|F}Q[{I|L}P]NE 4.9337 - 436 + 1 2.062 57490.9 1.0 5018 3564 8579 DOHH2_400M_050219_1,8584 DOHH2_400M_050219_1,8584,KENPLQFKF True True KENPLQFKF 48.538032 575.817431628704 921296.8125 8579.0 nc|ENSG00000137710|P35241-5|RDX;;ENSG00000137710|ENST00000645495|RDX;;ENSG00000092820|ENST00000367075|EZR;;nc|ENSG00000137710|P35241-3|RDX 6.913142840067546 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8585 48.544 353.0 249240.0 25 0 29444.0 + 18587 LADIYRELY 9 100 578.3057426489529 1154.5969323647057 2 578.3057128787041 MULTI CID FTMS 0 0 0 8579 204943.796875 1.0 0 0.0 6 Unmodified _LADIYRELY_ ENSG00000162227|ENST00000294168|TAF6L 38.61474834105838 0.0830609365873449 1 {I|L}AD{I|L}Y{[RE]|[WV]}{I|L}Y 9 0 + 80.372 0.0 0.0 6.961 6.961 96.195 0.0 0.0 0.0 58.43372183701504 14.973024840566469 14.973024840566469 73.73835032203424 0 1.6549471895720984 2.0 0.0 0.0 + + {I|L}AD{I|L}Y{[RE]|[WV]}{I|L}Y;[YE][K{I|L}]QQA{I|L}Y 6.961;0.57454 +;- + 200 + 1 2.062 67872.1 1.0 5019 3564 8579 DOHH2_400M_050219_1,8585 DOHH2_400M_050219_1,8585,LADIYRELY True True LADIYRELY 48.544422 578.305712878704 1226390.375 8579.0 ENSG00000162227|ENST00000294168|TAF6L 6.753267288208008 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8586 48.549 251.0 229650.0 25 0 27550.0 + 44047 YILPKNVL 8 82 480.2998891001834 958.5852252671668 2 480.2998535037041 MULTI CID FTMS 0 0 0 8579 193217.796875 0.2581992553067454 1 -0.1512031555175781 7 Unmodified _YILPKNVL_ ENSG00000174231|ENST00000304992|PRPF8;ENST00000575116.1_1_17:1555319-1557183:-|nuORF;ENST00000576585.1_1_17:1556769-1557303:-|nuORF 24.67388899826682 0.525179942228231 1 [Y{I|L}]{I|L}PK{[NV]|[RG]}{I|L} 8 0 + 38.862 0.0 0.0 4.0541 4.0541 85.834 0.0 0.0 0.0 26.38743756437101 0.6618377346445925 0.6618377346445925 38.86168767277148 0 0.4247425010840047 2.0 0.0 0.0 + + [Y{I|L}]{I|L}PK{[NV]|[RG]}{I|L} 4.0541 + + 136 + 1 2.062 47994.8 1.0 5020 3564 8579 DOHH2_400M_050219_1,8586 DOHH2_400M_050219_1,8586,YILPKNVL False True YILPKNVL 48.54909 480.299853503704 4256812.0 8579.0 ENST00000576585.1_1_17:1556769-1557303:-|nuORF;;ENSG00000174231|ENST00000304992|PRPF8;;ENST00000575116.1_1_17:1555319-1557183:-|nuORF 0.7432712589701017 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8587 48.557 444.0 202920.0 25 0 18463.0 + 7100 EEMEWFNNY 9 107 639.2425034821963 1276.4704540311925 2 639.2427856326103 MULTI CID FTMS 0 0 0 8579 169508.9375 1.0 0 0.0 8 Oxidation (M) _EEM(Oxidation (M))EWFNNY_ ENSG00000101003|ENST00000262460|GINS1 77.98433622928108 0.0180125044636492 1 [{M(Oxidation (M))|F}E]EEW{M(Oxidation (M))|F}W 7 5 46.954 0.0 0.0 3.6784 0.0 0.0 0.0 220.0622258419925 220.0622258419925 16.692897365566786 0.0 0.0 0.0 0 0.2614393726401688 0.0 2.1643943297944483 0.0 [{M(Oxidation (M))|F}E]EEW{M(Oxidation (M))|F}W 3.6784 - 660 1 2.062 72333.4 1.0 5021 3564 8579 DOHH2_400M_050219_1,8587 DOHH2_400M_050219_1,8587,EEMEWFNNY True False EEMEWFNNY 48.556986 639.2438 1038788.9375 8579.0 ENSG00000101003|ENST00000262460|GINS1 9.106256008148192 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8588 48.562 299.0 209260.0 25 0 17537.0 + 9499 FLDPASAGIGY 11 94 555.7758805071084 1109.5372080810166 2 555.7758056521416 MULTI CID FTMS 0 0 0 8579 176170.546875 1.0 0 0.0 9 Unmodified _FLDPASAGIGY_ ENSG00000160007|ENST00000672722|ARHGAP35 18.1463463914782 0.6576820063886638 1 [PA]SAG{I|L}D{M(Oxidation (M))|F} 8 5 31.371 0.0 0.0 2.8274 0.0 0.0 0.0 348.151573328731 348.151573328731 9.548675611262077 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.5709991640913001 0.0 [PA]SAG{I|L}D{M(Oxidation (M))|F} 2.8274 - 218 1 2.062 54188.4 1.0 5022 3564 8579 DOHH2_400M_050219_1,8588 DOHH2_400M_050219_1,8588,FLDPASAGIGY False True FLDPASAGIGY 48.562465 555.775805652142 1342950.75 8579.0 ENSG00000160007|ENST00000672722|ARHGAP35 4.980589230855306 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8589 48.567 226.0 135700.0 25 0 26340.0 43330 WLRRSRKSRV 10 62 672.4094461251519 1342.8043393171038 2 672.4098388552666 MULTI CID FTMS 0 0 0 8579 163461.71875 0.4958502628944151 1 -0.1512031555175781 10 Unmodified _WLRRSRKSRV_ ENST00000395442.5_1_10:55568369-55568990:-|nuORF 0.4007161486938917 0.7247829448918255 1 Y 1 10 11.594 0.0 0.0 0.8634 0.0 0.0 1161.7302711792115 0.0 1161.7302711792115 0.0 11.593793813122062 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.8634 - 1 + 1 2.062 34267.9 1.0 5023 3564 8579 DOHH2_400M_050219_1,8589 DOHH2_400M_050219_1,8589,WLRRSRKSRV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8590 48.575 478.0 132930.0 25 0 12093.0 + 38433 MPAVKAIIYQY 11 115 648.3746445009378 1294.7347360686756 2 648.3751098513603 MULTI CID FTMS 0 0 0 8579 150923.296875 0.3274496351338927 3 -0.430084228515625 11 Unmodified _TRRRRFIQY_ nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1;ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1 4.75600775471527 0.7486543447549536 1 QY 2 7 15.217 0.0 0.0 1.1753 0.0 0.0 985.6021809923068 0.0 985.6021809923068 0.0 3.6227313277985473 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + QY 1.1753 + + 97 + 1 2.062 56389.4 1.0 5024 3564 8579 DOHH2_400M_050219_1,8590 DOHH2_400M_050219_1,8590,TRRRRFIQY False False MPAVKAIIYQY 48.575184 648.37510985136 347291.4375 8579.0 nc|ENSG00000079459|P37268-4|FDFT1;;nc|ENSG00000079459|P37268-3|FDFT1;;nc|ENSG00000079459|P37268-5|FDFT1;;ENSG00000079459|ENST00000220584|FDFT1;;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;;nc|ENSG00000079459|P37268-2|FDFT1 2.091711034377416 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8591 48.586 628.0 284260.0 25 0 20036.0 + + 22202 IPNEIIHAL 9 169 509.7988543259962 1017.5831557187925 2 510.2975036501884 MULTI CID FTMS 0 0 0 8579 150902.078125 0.3131937402326933 -1 0.1043930053710937 12 Unmodified _LPQPAPVPSL_ ENSG00000099783|ENST00000325495|HNRNPM 14.838274106304384 0.5985701837916485 1 [NP]E{I|L}{I|L}KNP 8 -1 55.972 0.0 0.0 5.5005 0.0 0.0 0.0 109.06312716277162 109.06312716277162 20.22226598209072 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 1.2887254899964358 [NP]E{I|L}{I|L}KNP 5.5005 - 1558 1 2.062 143527.6 1.0 5025 3564 8579 DOHH2_400M_050219_1,8591 DOHH2_400M_050219_1,8591,LPQPAPVPSL False False IPNEIIHAL 48.586134 510.297503650188 3975249.75 8579.0 ENSG00000099783|ENST00000325495|HNRNPM 3.2869206269582114 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8592 48.596 521.0 162940.0 25 0 15035.0 + 32903 SEINSLPTI 9 135 487.2636668212928 972.5127807093857 2 487.2638427615166 MULTI CID FTMS 0 0 0 8579 126590.3125 0.9792671239967512 1 -0.1512031555175781 13 Unmodified _SEINSLPTI_ ENSG00000115761|ENST00000381685|NOL10;nc|ENSG00000115761|Q9BSC4-2|NOL10;nc|ENSG00000115761|Q9BSC4-3|NOL10;nc|ENSG00000115761|Q9BSC4-4|NOL10 48.345845343767074 0.0439967357579942 1 WW{I|L}{[SA]|[TG]}PT{I|L} 8 4 + 24.174 0.0 0.0 2.4857 2.4857 80.819 0.0 0.0 0.0 7.34054123486067 6.889042093317041 6.889042093317041 20.71407684618826 0 0.0 0.0 0.6549471895720985 0.0 WW{I|L}{[SA]|[TG]}PT{I|L};WW{I|L}{[SA]|[TG]}[{I|L}T]P 2.4857;0.35578 -;- 156 + 1 2.062 67428.0 1.0 5026 3564 8579 DOHH2_400M_050219_1,8592 DOHH2_400M_050219_1,8592,SEINSLPTI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8593 48.603 355.0 409690.0 25 0 40317.0 19290 LEKSAVLELFA 11 120 610.3488805438022 1218.6832081544044 2 610.3500244021416 MULTI CID FTMS 0 0 0 8579 109794.4453125 0.4181445361337359 -2 0.207489013671875 14 Unmodified _LEKSAVLELFA_ ENST00000515753.1_1_10:69833717-69833930:-|nuORF 7.608950283845883 0.8392484121837455 1 {[QN]|[E{I|L}]|[KN]}K 3 8 12.887 0.0 0.0 1.0574 0.0 0.0 0.0 845.4387372894231 845.4387372894231 1.2930354201075005 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 + {[QN]|[E{I|L}]|[KN]}K 1.0574 + + 60 1 2.062 109222.8 1.0 5027 3564 8579 DOHH2_400M_050219_1,8593 DOHH2_400M_050219_1,8593,LEKSAVLELFA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8594 48.617 800.0 130900.0 25 0 23737.0 + 25035 MPSVKVSVF 9 147 497.27513386202577 992.5357147908516 2 497.2748901247978 MULTI CID FTMS 0 0 0 8579 102739.7265625 1.0 0 0.0 15 Unmodified _MPSVKVSVF_ ENSG00000123136|ENST00000242776|DDX39A;ENST00000589318.5_1_19:14520811-14524032:-|nuORF;ENST00000590556.1_1_19:14521762-14522332:-|nuORF;nc|ENSG00000123136|O00148-2|DDX39A;nc|ENSG00000123136|O00148-3|DDX39A 18.1463463914782 0.3454829746528889 1 MPW 3 7 37.167 0.0 0.0 3.7446 0.0 0.0 0.0 575.3194725075856 575.3194725075856 16.992722392079074 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 MPW 3.7446 - 189 + 1 2.062 79572.5 0.449999988079071 5028 3564 8579 DOHH2_400M_050219_1,8594 DOHH2_400M_050219_1,8594,MPSVKVSVF False True MPSVKVSVF 48.616713 497.274890124798 480625.46875 8579.0 nc|ENSG00000123136|O00148-2|DDX39A;;nc|ENSG00000123136|O00148-3|DDX39A;;ENST00000590556.1_1_19:14521762-14522332:-|nuORF;;ENST00000589318.5_1_19:14520811-14524032:-|nuORF;;ENSG00000123136|ENST00000242776|DDX39A 2.307855208714803 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8595 48.627 594.0 190440.0 25 0 12990.0 + 32821 SEFTGVWKY 9 149 558.7704886853638 1115.5264244375276 2 558.7699462771416 MULTI CID FTMS 0 0 0 8579 108075.359375 0.0697330790979863 3 -0.430084228515625 16 Unmodified _SEFTGVWKY_ ENSG00000249915|ENST00000264933|PDCD6;ENST00000505526.1_1_5:271863-311637:+|nuORF;nc|ENSG00000249915|O75340-2|PDCD6 21.53697664764585 0.2571576504437394 1 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TRWKY 8 2 + 34.741 0.0 0.0 3.1143 3.1143 74.415 0.0 0.0 0.0 6.989700043360188 5.740312677277188 5.740312677277188 5.740312677277188 0 0.7396518287104438 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TRWKY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TR[YK]W;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T[VG]WKY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T[VG][YK]W;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TR{[DS]|[MA]|[CV]|TT}K{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TAAP[HA]W;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TAA{[CP]|[EA]}KY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{[ET]|[MV]};{[CT]|[{M(Oxidation (M))|F}G]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RWKY;[DV]PVDW{[TV]|[{I|L}S]}W 3.1143;2.5997;2.284;1.7694;1.5897;1.3007;1.3007;1.2959;1.1981;1.0753 -;-;+;-;-;-;-;-;-;- + 635 + 1 2.062 87213.4 1.0 5029 3564 8579 DOHH2_400M_050219_1,8595 DOHH2_400M_050219_1,8595,SEFTGVWKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8596 48.642 800.0 103240.0 25 0 7791.9 + 36785 TEETRIVYW 9 120 598.8008756803206 1195.587198427441 2 598.8011962771416 MULTI CID FTMS 0 0 0 8579 85439.78125 1.0 0 0.0 17 Unmodified _TEETRIVYW_ ENST00000453574.1_1_X:100673300-100674112:+|nuORF 34.93206674587334 0.1032771302489716 1 {I|L}VYW 4 5 38.175 0.0 0.0 3.193 0.0 0.0 616.2806904640714 0.0 616.2806904640714 0.0 18.96713777483761 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {I|L}VYW 3.193 + + 65 1 2.062 66190.6 0.4799999892711639 5030 3564 8579 DOHH2_400M_050219_1,8596 DOHH2_400M_050219_1,8596,TEETRIVYW True True TEETRIVYW 48.642125 598.801196277142 488913.84375 8579.0 ENST00000453574.1_1_X:100673300-100674112:+|nuORF 6.882195790608724 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8597 48.656 800.0 75095.0 25 0 7341.6 -1 0 90 1035.1625290806987 3102.4657578422966 3 1035.497119128704 MULTI CID FTMS 0 0 0 8579 169574.5625 0.1693240053031526 2 -0.2947006225585937 18 1 D 1 -1 13.099 0.0 0.0 0.42221 0.0 0.0 584.2545643537125 2400.1498758445027 2984.404440198215 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 D 0.42221 - 57 1 2.062 50011.1 0.6200000047683716 5031 3564 8579 DOHH2_400M_050219_1,8597 DOHH2_400M_050219_1,8597, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8598 48.67 800.0 186240.0 25 0 8730.4 15019 ILSTFLLIGWV 11 121 631.3790658355406 1260.743578737881 2 631.3787719607353 MULTI CID FTMS 0 0 0 8579 164939.53125 1.0 0 0.0 19 Unmodified _ILSTFLLIGWV_ ENSG00000178607|ENST00000433197|ERN1 17.11289562659939 0.6791789249425932 1 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 7 + 98.976 0.0 0.0 7.8506 7.8506 91.336 0.0 0.0 0.0 84.01133466169604 15.893943874995172 15.893943874995172 9.164539485499247 0 1.2638793319624575 2.0 0.0 0.3252574989159953 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}[{I|L}T]C{I|L};{I|L}V{M(Oxidation (M))|F}N{I|L}[KC][R{I|L}]R;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}[{I|L}T]C{I|L};{I|L}V{M(Oxidation (M))|F}N{I|L}[KC]RR{I|L};{I|L}V{M(Oxidation (M))|F}N{I|L}[QT][WK]{I|L};{I|L}V{M(Oxidation (M))|F}N[KT]{I|L}[WK]{I|L} 7.8506;7.1237;5.4791;5.1148;4.755;4.6833;4.6064;4.2767 -;-;-;-;-;-;-;- 495 + 1 2.062 115153.1 0.6200000047683716 5032 3564 8579 DOHH2_400M_050219_1,8598 DOHH2_400M_050219_1,8598,ILSTFLLIGWV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8599 48.674 149.0 285830.0 25 0 22509.0 + -1 EATLCCCRLI 10 83 591.2759136515247 1180.5372743698492 2 591.2758666872978 MULTI CID FTMS 0 0 0 8579 150058.609375 0.9957775820640918 -1 0.1043930053710937 20 Carbamidomethyl (C) _EATLC(Carbamidomethyl (C))CCRLI_ REV__ENST00000374825.8_1_6:32936812-32939746:+|nuORF;REV__ENST00000374831.8_1_6:32938956-32939746:+|nuORF;REV__ENST00000496118.2_1_6:32937075-32939746:+|nuORF;REV__ENST00000580234.1_1_6:32938180-32939746:+|nuORF;REV__ENST00000581002.1_1_6:32938681-32939746:+|nuORF 24.99096001346401 0.4071966087057876 1 EAT{I|L} 4 -1 37.484 0.0 0.0 3.1752 0.0 0.0 0.0 763.3024386041624 763.3024386041624 4.041068762088997 0.0 0.0 0.0 0 0.2614393726401688 1.2218487496163564 0.0 0.0 EAT{I|L} 3.1752 + + 106 + 1 2.062 37087.5 1.0 5033 3564 8579 DOHH2_400M_050219_1,8599 DOHH2_400M_050219_1,8599,EATLCCCRLI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8601 48.679 63.0 642870.0 25 0 140690.0 34124 SLLRLHHR 8 53 516.3142475947946 1030.613942256389 2 516.3145019412041 MULTI CID FTMS 0 0 0 8600 628734.4375 0.2216276730368942 2 -0.2788810729980469 1 Unmodified _SLLRLHHR_ ENSG00000166869|ENST00000300113|CHP2 0.6903765706972694 0.8201419426409876 1 P 1 8 0.3786 0.0 0.0 0.036736 0.0 0.0 810.4823332249422 120.05066095523672 930.5329941801788 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.036736 - 2 + 1 2.076 37070.9 1.0 5034 3565 8600 DOHH2_400M_050219_1,8601 DOHH2_400M_050219_1,8601,SLLRLHHR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8602 48.681 84.0 417280.0 25 0 110240.0 40833 VLNFFLLSFPI 11 55 655.3823448852442 1308.7501368372882 2 655.3825561404228 MULTI CID FTMS 0 0 0 8600 533426.0 0.2738154124153247 3 -0.4167938232421875 2 Unmodified _VLNFFLLSFPI_ ENST00000591445.1_1_17:67501802-67515615:+|nuORF 1.1933415558491238 0.8695176722560516 1 R 1 11 0.088644 0.0 0.0 0.0067732 0.0 0.0 998.584470188654 151.04026209049064 1149.6247322791446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.0067732 - 2 + 1 2.076 41924.9 1.0 5035 3565 8600 DOHH2_400M_050219_1,8602 DOHH2_400M_050219_1,8602,VLNFFLLSFPI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8603 48.683 91.0 808940.0 25 0 65804.0 + 6437 EAEPHPLWEY 10 88 635.7905454156027 1269.5665378980052 2 635.7909423708916 MULTI CID FTMS 0 0 0 8600 714970.9375 0.5231274249359371 -1 0.1512031555175781 3 Unmodified _EAEPHPLWEY_ ENSG00000132600|ENST00000441236|PRMT7;ENST00000568463.1_1_16:68389580-68391124:+|nuORF;ENST00000568975.5_1_16:68386292-68391124:+|nuORF;nc|ENSG00000132600|Q9NVM4-2|PRMT7;nc|ENSG00000132600|Q9NVM4-3|PRMT7 63.22749603027936 0.0281198777558511 1 [WE][{M(Oxidation (M))|F}T][{I|L}P]WEY 9 4 + 44.917 0.0 0.0 3.5379 3.5379 73.118 0.0 0.0 0.0 5.924325916815924 14.973024840566469 5.924325916815924 3.2441718555279664 0 0.8807196863200843 1.154901959985743 2.0 0.0 [WE][{M(Oxidation (M))|F}T][{I|L}P]WEY;[WE]{[ET]|[MV]}[{I|L}P]W{M(Oxidation (M))|F}Y;[YE][RD][{I|L}P]WEY;[WE][{I|L}P]{[ET]|[MV]}W{M(Oxidation (M))|F}Y;[WE][{I|L}P][{M(Oxidation (M))|F}T]WEY;[{I|L}P]WE{[ET]|[MV]}W{M(Oxidation (M))|F}Y;[{I|L}P]WE[{M(Oxidation (M))|F}T]WEY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{[CP]|[EA]}[{I|L}P]WEY;[YE][QP]{I|L}P[MT]EY;[YE][QP]{I|L}P[DV]{M(Oxidation (M))|F}Y 3.5379;3.2824;3.0713;3.0453;2.9829;2.7625;2.7001;2.5922;2.4983;2.4802 -;-;-;-;-;-;-;-;-;- 903 1 2.076 60539.2 1.0 5036 3565 8600 DOHH2_400M_050219_1,8603 DOHH2_400M_050219_1,8603,EAEPHPLWEY True True EAEPHPLWEY 48.683327 635.790942370892 47522136.0 8600.0 nc|ENSG00000132600|Q9NVM4-2|PRMT7;;ENST00000568463.1_1_16:68389580-68391124:+|nuORF;;ENST00000568975.5_1_16:68386292-68391124:+|nuORF;;nc|ENSG00000132600|Q9NVM4-3|PRMT7;;ENSG00000132600|ENST00000441236|PRMT7 7.783296744028727 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8604 48.691 404.0 192300.0 25 0 50087.0 31684 RRLGRNAKWVA 11 90 663.8958194908566 1325.7770860485132 2 663.8962890505791 MULTI CID FTMS 0 0 0 8600 334780.96875 0.4285730230557518 2 -0.2788810729980469 4 Unmodified _RRLGRNAKWVA_ ENSG00000224982|ENST00000426426|TMEM233;ENST00000453450.2_1_12:120031743-120072065:+|nuORF 1.3295316138638542 0.8688751186870782 1 Y 1 11 10.713 0.0 0.0 0.80808 0.0 0.0 1144.7029110990975 0.0 1144.7029110990975 0.0 -7.245462655597095 -7.245462655597095 0.0 0 0.0 0.0 0.0 0.0 Y 0.80808 - 3 + 1 2.076 74337.4 1.0 5037 3565 8600 DOHH2_400M_050219_1,8604 DOHH2_400M_050219_1,8604,RRLGRNAKWVA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8605 48.695 222.0 403060.0 25 0 71713.0 + 43749 YEDGSIRIF 9 77 550.2746199855296 1098.5346870378592 2 550.2747680544853 MULTI CID FTMS 0 0 0 8600 279471.625 0.9240027681569376 -1 0.1512031555175781 5 Unmodified _YEDGSIRIF_ ENSG00000065183|ENST00000349139|WDR3 55.50274090549119 0.0285720310785888 1 YEDGS{I|L}R{I|L}{M(Oxidation (M))|F} 9 0 + 87.942 0.0 0.0 8.0053 8.0053 97.241 0.0 0.0 0.0 63.00144452714427 11.566366357824975 11.566366357824975 32.35190554423035 0 1.1237125054200234 2.0 0.8494850021680094 0.3807196863200844 + + YEDGS{I|L}R{I|L}{M(Oxidation (M))|F};YEWWR{I|L}{M(Oxidation (M))|F};Y{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PR{I|L}{M(Oxidation (M))|F};Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}D[QA][VP];[{I|L}T][WQ]{I|L}{M(Oxidation (M))|F}EY;Y{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RR[NS] 8.0053;5.0603;2.5263;2.193;1.9783;0.70765 +;-;-;-;-;- + 149 + 1 2.076 72674.2 1.0 5038 3565 8600 DOHH2_400M_050219_1,8605 DOHH2_400M_050219_1,8605,YEDGSIRIF True True YEDGSIRIF 48.694747 550.274768054485 2430370.75 8600.0 ENSG00000065183|ENST00000349139|WDR3 6.39883279800415 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8606 48.701 354.0 268090.0 25 0 22830.0 + 42699 VTYKYHVKLT 10 100 626.3606119729834 1250.7066710127667 2 626.3615600466728 MULTI CID FTMS 0 0 0 8600 268664.5625 0.981670942479996 -1 0.1512031555175781 6 Unmodified _VTYKYHVKLT_ REV__ENSG00000116701|ENST00000367535|NCF2;REV__nc|ENSG00000116701|P19878-2|NCF2;REV__nc|ENSG00000116701|P19878-3|NCF2;REV__nc|ENSG00000116701|P19878-4|NCF2 5.731851221503515 0.7001233259664787 1 W 1 -1 12.218 0.0 0.0 0.97693 0.0 0.0 1046.616138641476 0.0 1046.616138641476 0.0 1.249387366082999 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.97693 - 10 + 1 2.076 73184.7 1.0 5039 3565 8600 DOHH2_400M_050219_1,8606 DOHH2_400M_050219_1,8606,VTYKYHVKLT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8607 48.705 177.0 429460.0 25 0 28081.0 + 30552 RENFPGVSW 9 98 546.267132235783 1090.519711538366 2 546.2673217654228 MULTI CID FTMS 0 0 0 8600 212527.390625 0.6796560683965682 -1 0.1512031555175781 7 Unmodified _RENFPGVSW_ ENSG00000145604|ENST00000274255|SKP2;nc|ENSG00000145604|Q13309-2|SKP2 29.84058131909904 0.1515068451768857 1 {[CT]|[{M(Oxidation (M))|F}G]}D{[QV]|[N{I|L}]|[RA]|[KV]}[RP]SW 9 6 + 39.868 0.0 0.0 3.6558 3.6558 71.438 0.0 0.0 0.0 0.0 0.0 0.0 1.8040092401238887 0 0.9247425010840048 0.0 0.6747425010840047 0.25 {[CT]|[{M(Oxidation (M))|F}G]}D{[QV]|[N{I|L}]|[RA]|[KV]}[RP]SW;{[CT]|[{M(Oxidation (M))|F}G]}SVQ[RP]DW;[MT]S{[QV]|[N{I|L}]|[RA]|[KV]}[RP]SW;[MT]S{[QV]|[N{I|L}]|[RA]|[KV]}[RP]C(Carbamidomethyl (C)){I|L};[YQ][RP]{[QV]|[N{I|L}]|[RA]|[KV]}DW;[MT]S[RP]QVSW;[MT]S[RP]QVC(Carbamidomethyl (C)){I|L};{[CT]|[{M(Oxidation (M))|F}G]}S[RP][WR]W;[YQ]VQ[RP]DW;[Y{M(Oxidation (M))|F}][HV][PG]VSW 3.6558;3.4904;3.3563;3.2405;3.222;3.1909;3.0751;3.0618;3.0566;2.9944 -;-;-;-;-;-;-;-;-;- 271 + 1 2.076 60764.1 1.0 5040 3565 8600 DOHH2_400M_050219_1,8607 DOHH2_400M_050219_1,8607,RENFPGVSW False True RENFPGVSW 48.704589 546.267321765423 8190960.0 8600.0 ENSG00000145604|ENST00000274255|SKP2;;nc|ENSG00000145604|Q13309-2|SKP2 6.002200444539388 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8608 48.711 334.0 231000.0 25 0 22080.0 + + 30159 IRNDYYLNL 9 108 592.3093368842259 1182.6041208352517 2 592.3093749880791 MULTI CID FTMS 0 0 0 8600 169648.875 1.0 0 0.0 8 Unmodified _QVPQEREANI_ ENST00000488829.1_1_9:89626569-89628063:+|nuORF;ENSG00000117399|ENST00000310955|CDC20 19.62595529434964 0.5182375435722777 1 {[QV]|[N{I|L}]|[RA]|[KV]}RDYY{I|L}N{I|L} 9 -1 + 56.058 0.0 0.0 4.7402 4.7402 81.799 0.0 0.0 0.0 8.900925144087779 11.706962271689749 8.900925144087779 8.900925144087779 0 0.4247425010840047 1.0457574905606752 0.0 0.2302046884880938 {[QV]|[N{I|L}]|[RA]|[KV]}RDYY{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RN]YY{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[VG]DYY{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}RDYY{I|L}GG{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y[RN]Y{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RN]YY{I|L}GG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[VG]DYY{I|L}GG{I|L};[Y{I|L}]D[RN]Y{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[MG]|[TS]}[{M(Oxidation (M))|F}V]Y{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y[RN]Y{I|L}GG{I|L} 4.7402;3.9876;3.9616;3.9616;3.4785;3.2089;3.1867;3.1759;2.7363;2.6999 -;-;-;-;-;-;-;-;-;- 304 1 2.076 62372.7 1.0 5041 3565 8600 DOHH2_400M_050219_1,8608 DOHH2_400M_050219_1,8608,QVPQEREANI False False IRNDYYLNL 48.710648 592.309374988079 606761.625 8600.0 ENST00000488829.1_1_9:89626569-89628063:+|nuORF;;ENSG00000117399|ENST00000310955|CDC20 5.251039346059163 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8609 48.724 800.0 182280.0 25 0 12751.0 + 7119 EEMLEIRQL 9 133 580.8029096521515 1159.5912663711028 2 580.8024780154228 MULTI CID FTMS 0 0 0 8600 144835.28125 1.0 0 0.0 9 Unmodified _EEMLEIRQL_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 71.92227651296345 0.0203558744033348 1 EEM{I|L}E{I|L}RQ{I|L} 9 0 + 78.934 0.0 0.0 6.8071 6.8071 86.95 0.0 0.0 0.0 60.21839428613313 8.440134937608775 8.440134937608775 6.505149978319906 0 0.8494850021680094 1.6989700043360187 0.4247425010840047 1.4674165578762484 + + EEM{I|L}E{I|L}RQ{I|L};EE{I|L}ME{I|L}RQ{I|L};EEM{I|L}E{I|L}R[AG]{I|L};EE{I|L}ME{I|L}R[AG]{I|L};{[QN]|[E{I|L}]|[KN]}R{I|L}Q[YV][HC];{[QN]|[E{I|L}]|[KN]}R{I|L}[YN]{I|L}[HC];EE{I|L}[YV]VV{M(Oxidation (M))|F}Y;EE[YV]{I|L}VV{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}RQ{I|L}[YV][HC];{[QN]|[E{I|L}]|[KN]}RQ[YV]{I|L}[HC] 6.8071;6.2461;5.7325;5.1715;1.711;1.711;1.6108;1.6108;1.3937;1.3937 +;-;-;-;-;-;-;-;-;- + 420 + 1 2.076 110356.8 0.6100000143051147 5042 3565 8600 DOHH2_400M_050219_1,8609 DOHH2_400M_050219_1,8609,EEMLEIRQL True True EEMLEIRQL 48.724479 580.802478015423 487939.5 8600.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 4.57673184076945 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8610 48.738 800.0 239410.0 25 0 25326.0 9258 FHKTKQKLKQ 10 123 643.3879973247022 1284.7614417162042 2 643.3890258669853 MULTI CID FTMS 0 0 0 8600 102214.3203125 1.0 0 0.0 10 Unmodified _FHKTKQKLKQ_ ENSG00000039139|ENST00000265104|DNAH5 3.944395688203298 0.708391353636983 1 Y 1 10 12.764 0.0 0.0 0.99351 0.0 0.0 1103.6870684025307 0.0 1103.6870684025307 0.0 9.26935982160881 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.99351 - 39 + 1 2.076 142784.0 0.550000011920929 5043 3565 8600 DOHH2_400M_050219_1,8610 DOHH2_400M_050219_1,8610,FHKTKQKLKQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8611 48.752 800.0 73230.0 25 0 19069.0 43324 WLKRRIWRMP 10 92 721.4219147625729 1440.8292765919457 2 721.4235107302666 MULTI CID FTMS 0 0 0 8600 105894.6796875 0.4310187488838587 -4 0.4449691772460937 11 Unmodified _WLKRRIWRMP_ ENST00000577847.1_1_17:18087769-18087952:-|nuORF 0.4583401331227399 0.7245164002484112 1 Y 1 10 11.594 0.0 0.0 0.80466 0.0 0.0 1259.7551474188972 0.0 1259.7551474188972 0.0 6.109243748081781 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.80466 - 5 + 1 2.076 57248.4 0.550000011920929 5044 3565 8600 DOHH2_400M_050219_1,8611 DOHH2_400M_050219_1,8611,WLKRRIWRMP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8612 48.767 800.0 70970.0 25 0 9918.5 + 20053 LIEPHYQPWSY 11 106 716.4347411990166 0 716.4347411990166 PEAK CID FTMS 0 0 0 -1 0 12 Unmodified _LIQRRRTRIGY_ nc|ENSG00000198863|Q96C34-2|RUNDC1;ENSG00000198863|ENST00000361677|RUNDC1 6.2057823575117 0.47618401536486 1 V 1 11 3.0989 0.0 0.0 0.21658 0.0 0.0 715.4482610334 613.3110445611936 1328.7593055945936 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.21658 - 22 + 1 2.076 46775.9 0.5899999737739563 5045 3565 8600 DOHH2_400M_050219_1,8612 DOHH2_400M_050219_1,8612,LIQRRRTRIGY False False LIEPHYQPWSY 48.767428 716.434741199017 753691.6875 8600.0 nc|ENSG00000198863|Q96C34-2|RUNDC1;;ENSG00000198863|ENST00000361677|RUNDC1 1.3617600500583649 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8613 48.781 800.0 234270.0 25 0 22573.0 -1 GKLKGSKFKMP 11 142 618.8622956182547 1235.7100383033094 2 618.8619262576103 MULTI CID FTMS 0 0 0 8600 99503.296875 0.9940388522384762 -1 0.1512031555175781 13 Oxidation (M) _GKLKGSKFKM(Oxidation (M))P_ ENSG00000124942|ENST00000378024|AHNAK 3.876331618118854 0.8568591502966533 1 W 1 -1 13.495 0.0 0.0 1.0921 0.0 0.0 1031.620070507214 0.0 1031.620070507214 0.0 0.3072623954359681 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.0921 - 452 + 1 2.076 139451.4 0.5799999833106995 5046 3565 8600 DOHH2_400M_050219_1,8613 DOHH2_400M_050219_1,8613,GKLKGSKFKMP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8614 48.791 474.0 171400.0 25 0 21544.0 + 8795 EWCPPGPS 8 124 436.6824340943299 0 436.6824523806572 PEAK CID FTMS 0 0 0 8600 95955.609375 1.0 0 0.0 14 Unmodified _EWCPPGPS_ REV__ENST00000270357.9_2_2:241517773-241518097:+|nuORF 5.760428011301431 0.5786759180849727 1 N 1 -1 1.2591 0.0 0.0 0.1445 0.0 0.0 574.2390004134661 180.0430086725219 754.282009085988 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.1445 - 1 + 1 2.076 66337.6 1.0 5047 3565 8600 DOHH2_400M_050219_1,8614 DOHH2_400M_050219_1,8614,EWCPPGPS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8615 48.805 800.0 119430.0 25 0 6566.8 -1 0 111 620.640676913773 1858.9002013415188 3 620.9746581912041 MULTI CID FTMS 0 0 0 8600 89190.3125 1.0 0 0.0 15 1 {M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SHG[R{I|L}]P{M(Oxidation (M))|F} 13 -1 61.703 0.0 0.0 3.3193 0.0 0.0 290.1270881008193 0.0 290.1270881008193 0.0 42.516582678082486 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SHG[R{I|L}]P{M(Oxidation (M))|F} 3.3193 - 1164 + 1 2.076 78416.8 0.4600000083446502 5048 3565 8600 DOHH2_400M_050219_1,8615 DOHH2_400M_050219_1,8615, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8616 48.817 738.0 442950.0 25 0 33080.0 + -1 ADYVVTGAW 9 109 981.4681897454376 0 981.4681884646416 PEAK CID FTMS 0 0 0 8600 224672.484375 0.6424324618960262 -1 0.1512031555175781 16 ENSG00000135069|ENST00000376588|PSAT1;nc|ENSG00000135069|Q9Y617-2|PSAT1 1 WAGTVVA 7 -1 44.478 0.0 0.0 2.2682 0.0 0.0 998.470691246266 275.06684290103755 1273.5375341473034 0.0 0.0 0.0 0.0 0 0.0 0.0 1.424742501084005 0.0 WAGTVVA 2.2682 - 4462 + 1 2.076 211299.9 1.0 5049 3565 8600 DOHH2_400M_050219_1,8616 DOHH2_400M_050219_1,8616, False False ADYVVTGAW 48.81748 981.468188464642 1927308.0 8600.0 ENSG00000135069|ENST00000376588|PSAT1;;nc|ENSG00000135069|Q9Y617-2|PSAT1 8.555039087931315 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8618 48.823 77.0 432410.0 25 0 104160.0 1970 AMYSEIQRERA 11 62 677.330856640168 1352.647160347136 2 677.3305541872978 MULTI CID FTMS 0 0 0 8617 52333.6484375 0.0607981005984196 2 -0.2732963562011719 1 Unmodified _AMYSEIQRERA_ nc|ENSG00000168309|O95990-3|FAM107A;nc|ENSG00000168309|O95990-4|FAM107A 2.498486711656943 0.8633599123570009 1 {I|L}D 2 10 9.464 0.0 0.0 0.69966 0.0 0.0 458.2055842746734 663.3090304010374 1121.5146146757108 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D 0.69966 - 5 + 1 2.085 40711.6 1.0 5050 3566 8617 DOHH2_400M_050219_1,8618 DOHH2_400M_050219_1,8618,AMYSEIQRERA False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8619 48.835 677.0 166800.0 25 0 28369.0 20909 LMVVVIVLY 9 138 524.8273819803948 1047.6402110275894 2 524.8276244997978 MULTI CID FTMS 0 0 0 8617 134777.78125 0.0830952479854904 3 -0.4039306640625 2 Unmodified _LMVVVIVLY_ ENSG00000103546|ENST00000568943|SLC6A2;nc|ENSG00000103546|P23975-2|SLC6A2;nc|ENSG00000103546|P23975-3|SLC6A2 5.230669730166228 0.7320841359114558 1 Y 1 8 13.099 0.0 0.0 1.2503 0.0 0.0 866.5660055605957 0.0 866.5660055605957 0.0 2.503011752845925 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2503 + + 47 + 1 2.085 89464.1 1.0 5051 3566 8617 DOHH2_400M_050219_1,8619 DOHH2_400M_050219_1,8619,LMVVVIVLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8620 48.837 79.0 463170.0 25 0 115110.0 14406 IFIFRHALHLS 11 59 677.3959601231061 1352.777367313012 2 677.3959228396416 MULTI CID FTMS 0 0 0 8617 685065.8125 0.5881850449859305 -2 0.2947006225585937 3 Unmodified _IFIFRHALHLS_ ENST00000544944.6_1_19:45542792-45543053:+|nuORF 1.3295316138638542 0.8688751186870782 1 {I|L}D 2 10 9.464 0.0 0.0 0.69959 0.0 0.0 458.33554709992455 663.3123262994749 1121.6478733993995 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D 0.69959 - 6 + 1 2.085 40316.0 1.0 5052 3566 8617 DOHH2_400M_050219_1,8620 DOHH2_400M_050219_1,8620,IFIFRHALHLS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8621 48.839 78.0 975640.0 25 0 84964.0 + 25722 NIKEKLFSL 9 100 546.3270615807934 0 546.3270751833916 PEAK CID FTMS 0 0 0 8617 629077.0 1.0 0 0.0 4 Unmodified _NIKEKLFSL_ ENSG00000127989|ENST00000351870|MTERF1 32.78568957990786 0.0971838787772021 1 KE{I|L}A 4 6 22.057 0.0 0.0 2.0224 0.0 0.0 227.12755854602705 419.2360018365844 646.3635603826115 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.2887254899964357 0.0 KE{I|L}A 2.0224 - 189 + 1 2.085 63159.9 1.0 5053 3566 8617 DOHH2_400M_050219_1,8621 DOHH2_400M_050219_1,8621,NIKEKLFSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8622 48.841 88.0 791560.0 25 0 73293.0 + 43282 WIKEKIYVL 9 100 596.3590121132161 1190.703471293232 2 596.3607665896416 MULTI CID FTMS 0 0 0 8617 504955.71875 1.0 0 0.0 5 Unmodified _WIKEKIYVL_ ENSG00000100632|ENST00000557016|ERH;ENST00000216520.6_1_14:69847257-69864987:-|nuORF 45.69961567697781 0.0497987121815769 1 W{I|L}K[PA]D[H{I|L}]V{I|L} 10 4 + 57.401 0.0 0.0 4.8208 4.8208 81.457 0.0 0.0 0.0 15.873179320886557 7.587418566968154 7.587418566968154 7.769250191953674 0 1.1549471895720984 2.0 0.4247425010840047 0.0 W{I|L}K[PA]D[H{I|L}]V{I|L};W{I|L}K[WP][H{I|L}]V{I|L};W{I|L}K[PA]D{I|L}{I|L}[HV];W{I|L}K[YR][DV]V{I|L};W{I|L}K[WP]{I|L}{I|L}[HV];[KA][VS]{I|L}YV{I|L}SV{I|L};W{I|L}K[HQ]{[QV]|[N{I|L}]|[RA]|[KV]}[RP];[KA][VS]{I|L}Y[W{I|L}]V{I|L};[KA][VS]{I|L}[HQ]K{I|L}[PA];[KA][VS]{I|L}[W{I|L}]YV{I|L} 4.8208;4.1683;4.0666;3.8715;3.4141;3.2348;2.0912;1.6135;1.5803;1.2128 -;-;-;-;-;-;-;-;-;- 217 + 1 2.085 55759.3 1.0 5054 3566 8617 DOHH2_400M_050219_1,8622 DOHH2_400M_050219_1,8622,WIKEKIYVL True True WIKEKIYVL 48.840576 596.360766589642 3855777.25 8617.0 ENSG00000100632|ENST00000557016|ERH;;ENST00000216520.6_1_14:69847257-69864987:-|nuORF 4.890337387720744 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8623 48.844 148.0 544790.0 25 0 47330.0 + -1 AEIDAHLVAL 10 87 526.2929235064479 525.2856470398478 1 526.2929565310478 MULTI CID FTMS 0 0 0 8617 420539.53125 1.0 0 0.0 6 ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;ENST00000554457.1_1_14:35786443-35786509:+|nuORF;ENSG00000100902|ENST00000261479|PSMA6;nc|ENSG00000100902|P60900-2|PSMA6;nc|ENSG00000100902|P60900-3|PSMA6 1 [H{I|L}]AVS 5 -1 + 23.188 0.0 0.0 4.4143 4.4143 73.748 0.0 0.0 0.0 4.515449934959715 6.46713777483761 4.515449934959715 1.7609125905568137 0 0.0 0.0 0.0 0.0 [H{I|L}]AVS;[H{I|L}]ASV;[HA]{I|L}VS;[HA]{I|L}SV;[TA][HV]V;{[CP]|[EA]}[{I|L}P]P;[{I|L}V][HA]S;[PG][KQ]P 4.4143;4.0791;3.3785;3.0433;2.8479;1.4178;0.7473;0.66019 -;-;-;-;-;-;-;- 59 1 2.085 67948.7 1.0 5055 3566 8617 DOHH2_400M_050219_1,8623 DOHH2_400M_050219_1,8623, False False AEIDAHLVAL 48.843532 526.292956531048 2049399.25 8617.0 ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;;ENST00000554457.1_1_14:35786443-35786509:+|nuORF;;ENSG00000100902|ENST00000261479|PSMA6;;nc|ENSG00000100902|P60900-2|PSMA6;;nc|ENSG00000100902|P60900-3|PSMA6 3.854080438613892 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8624 48.846 114.0 470410.0 25 0 28717.0 + 29138 QEVDFFQRY 9 74 616.2909562478801 1230.56735956256 2 616.2906982302666 MULTI CID FTMS 0 0 0 8617 359470.9375 1.0 0 0.0 7 Unmodified _QEVDFFQRY_ ENSG00000149262|ENST00000534064|INTS4 67.83816525789305 0.0219346420158844 1 QEVD{M(Oxidation (M))|F}{M(Oxidation (M))|F}QRY 9 0 + 82.445 0.0 0.0 6.6997 6.6997 90.088 0.0 0.0 0.0 74.97047912498971 12.252684618815096 12.252684618815096 9.208187539523747 0 1.2302046884880935 1.3010299956639813 0.0 0.0 + + QEVD{M(Oxidation (M))|F}{M(Oxidation (M))|F}QRY;QEVD{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG]RY;[AG]EVD{M(Oxidation (M))|F}{M(Oxidation (M))|F}[HV][NP] 6.6997;5.9514;3.7559 +;-;- + 127 + 1 2.085 47790.7 1.0 5056 3566 8617 DOHH2_400M_050219_1,8624 DOHH2_400M_050219_1,8624,QEVDFFQRY True True QEVDFFQRY 48.845938 616.290698230267 2081163.0 8617.0 ENSG00000149262|ENST00000534064|INTS4 8.904842535654703 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8625 48.849 141.0 267960.0 25 0 62446.0 + 30223 QWPRRRLFVL 10 68 685.9091353134543 1369.8037176937084 2 685.9092285037041 MULTI CID FTMS 0 0 0 8617 340250.53125 0.5423909119974112 -2 0.2947006225585937 8 Unmodified _QWPRRRLFVL_ REV__ENST00000296498.3_1_4:119259441-119273552:-|nuORF 0.4583401331227399 0.7245164002484112 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.085 40217.1 1.0 5057 3566 8617 DOHH2_400M_050219_1,8625 DOHH2_400M_050219_1,8625,QWPRRRLFVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8626 48.852 146.0 464330.0 25 0 24818.0 + 42360 VTDGAILGKLY 11 98 575.3296307817944 1148.6447086303888 2 575.3294555544853 MULTI CID FTMS 0 0 0 8617 338936.65625 0.729312497869247 -1 0.1434974670410156 9 Unmodified _VTDGAILGKLY_ ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C 45.60251928735463 0.1419832550123853 1 {[TV]|[{I|L}S]}DQ{I|L}{I|L}GK{I|L}Y 10 2 + 87.981 0.0 0.0 7.6596 7.6596 91.031 0.0 0.0 0.0 42.57515625508539 13.037275116073346 13.037275116073346 9.164539485499247 0 2.0356668758921828 2.0 0.0 0.0 {[TV]|[{I|L}S]}DQ{I|L}{I|L}GK{I|L}Y;{[TV]|[{I|L}S]}D[AG]{I|L}{I|L}GK{I|L}Y;[KG]{I|L}{I|L}{I|L}QDS{I|L}Y;{[TV]|[{I|L}S]}DQ{I|L}{I|L}[HK][VP];[KG]{I|L}{I|L}{I|L}[AG]DS{I|L}Y;{[TV]|[{I|L}S]}D[AG]{I|L}{I|L}[HK][VP];{[TV]|[{I|L}S]}QE{I|L}[RK]{I|L}Y;{[TV]|[{I|L}S]}Q[TP][K{I|L}]S{I|L}Y;{I|L}{I|L}[KG]{I|L}QDS{I|L}Y;{[TV]|[{I|L}S]}[AG]E{I|L}[RK]{I|L}Y 7.6596;6.8617;4.9984;4.6488;4.2006;3.851;3.8081;3.4395;3.1729;3.0064 -;+;-;-;-;-;-;-;-;- + 706 + 1 2.085 58647.1 1.0 5058 3566 8617 DOHH2_400M_050219_1,8626 DOHH2_400M_050219_1,8626,VTDGAILGKLY False True VTDGAILGKLY 48.851717 575.329455554485 3085284.5 8617.0 nc|ENSG00000055609|Q8NEZ4-3|KMT2C;;ENSG00000055609|ENST00000262189|KMT2C;;nc|ENSG00000055609|Q8NEZ4-2|KMT2C 6.207880179087321 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8627 48.857 260.0 147250.0 25 0 31638.0 + 16228 IVNHGFVQRRK 11 66 451.93271709627527 1352.776321889026 3 451.9327270388603 MULTI CID FTMS 0 0 0 8617 192584.0 0.5158959757741803 -1 0.1434974670410156 10 Unmodified _IVNHGFVQRRK_ REV__ENSG00000058668|ENST00000357681|ATP2B4;REV__nc|ENSG00000058668|P23634-2|ATP2B4;REV__nc|ENSG00000058668|P23634-3|ATP2B4;REV__nc|ENSG00000058668|P23634-4|ATP2B4;REV__nc|ENSG00000058668|P23634-5|ATP2B4;REV__nc|ENSG00000058668|P23634-7|ATP2B4;REV__nc|ENSG00000058668|P23634-8|ATP2B4;REV__nc|ENSG00000058668|P23634|ATP2B4 1.1933415558491238 0.8695176722560516 1 {I|L} 1 -1 10.485 0.0 0.0 0.77504 0.0 0.0 1221.681364468907 0.0 1221.681364468907 0.0 9.771212547196624 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.77504 + + 3 + 1 2.085 43173.9 1.0 5059 3566 8617 DOHH2_400M_050219_1,8627 DOHH2_400M_050219_1,8627,IVNHGFVQRRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8628 48.87 800.0 135610.0 25 0 17838.0 + 10801 FYQYLALLPLV 11 117 670.3875985051358 1338.7606440770714 2 670.3884155154228 MULTI CID FTMS 0 0 0 8617 164117.34375 0.5920337533602188 -1 0.1434974670410156 11 Unmodified _FYQYLALLPLV_ REV__ENSG00000188596|ENST00000524981|CFAP54;REV__ENST00000342887.1_1_12:97043703-97159031:+|nuORF;REV__nc|ENSG00000188596|Q96N23-2|CFAP54 3.5964929083625545 0.858179447565866 1 Y 1 -1 11.783 0.0 0.0 0.88012 0.0 0.0 1157.686530162812 0.0 1157.686530162812 0.0 1.0693990997254057 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.88012 + + 97 + 1 2.085 88891.5 0.7099999785423279 5060 3566 8617 DOHH2_400M_050219_1,8628 DOHH2_400M_050219_1,8628,FYQYLALLPLV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8629 48.876 287.0 451100.0 25 0 61054.0 + 5204 QPLLREVL 8 116 484.3004484538888 966.5863439745776 2 484.3010742068291 MULTI CID FTMS 0 0 0 8617 135212.140625 0.2074717703285042 -1 0.1434974670410156 12 Unmodified _DITKKHLI_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENSG00000103061|ENST00000263997|SLC7A6OS 26.34127834903884 0.4900704351052977 1 [QP]{I|L}{I|L}{[RE]|[WV]}V{I|L} 8 7 + 33.901 0.0 0.0 3.5073 3.5073 72.624 0.0 0.0 0.0 6.989700043360188 13.802112417116057 6.989700043360188 3.0102999566398125 0 0.5 0.0 0.3494850021680094 0.0 [QP]{I|L}{I|L}{[RE]|[WV]}V{I|L};[QP]{I|L}{I|L}[RD]{I|L}{I|L};{[RE]|[WV]}{I|L}{I|L}V[QP]{I|L} 3.5073;3.1958;2.0794 -;-;- 253 + 1 2.085 104054.5 1.0 5061 3566 8617 DOHH2_400M_050219_1,8629 DOHH2_400M_050219_1,8629,DITKKHLI False False QPLLREVL 48.875634 484.301074206829 3849914.5 8617.0 ENSG00000159377|ENST00000290541|PSMB4;;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;;ENSG00000103061|ENST00000263997|SLC7A6OS 3.775718530019125 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8630 48.881 322.0 170360.0 25 0 32582.0 + 29659 QNRKLKLFDIL 11 80 694.4225253922903 1386.8304978513804 2 694.4216796755791 MULTI CID FTMS 0 0 0 8617 123591.8359375 0.4407711184458938 -2 0.2947006225585937 13 Unmodified _QNRKLKLFDIL_ REV__ENSG00000151465|ENST00000281141|CDC123;REV__ENST00000498747.1_1_10:12279256-12292333:+|nuORF 1.3295316138638542 0.8688751186870782 1 Y 1 -1 11.259 0.0 0.0 0.81186 0.0 0.0 1205.7562923843866 0.0 1205.7562923843866 0.0 0.7745097999287154 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.81186 - 39 + 1 2.085 50526.3 1.0 5062 3566 8617 DOHH2_400M_050219_1,8630 DOHH2_400M_050219_1,8630,QNRKLKLFDIL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8631 48.888 355.0 177450.0 25 0 11809.0 23867 LVKRNIEPRH 10 88 421.25594444074727 1260.7460039224418 3 421.2566100955009 MULTI CID FTMS 0 0 0 8617 108045.8125 0.1140256601977506 2 -0.2732963562011719 14 Unmodified _LVKRNIEPRH_ ENSG00000132970|ENST00000335327|WASF3;nc|ENSG00000132970|Q9UPY6-2|WASF3 6.2057823575117 0.6979311171683138 1 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 6 + 69.43 0.0 0.0 5.507 5.507 85.332 0.0 0.0 0.0 59.15221048727999 11.53212513775344 11.53212513775344 9.164539485499256 0 0.3054621874040891 1.6989700043360187 0.0 0.0 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR;[{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}[{I|L}T]{[ES]|[DT]|[{I|L}C]};[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}[{I|L}T]{[ES]|[DT]|[{I|L}C]} 5.507;4.7801;3.5314;2.8074 -;-;-;- 107 + 1 2.085 59426.7 1.0 5063 3566 8617 DOHH2_400M_050219_1,8631 DOHH2_400M_050219_1,8631,LVKRNIEPRH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8632 48.901 663.0 180390.0 25 0 20699.0 + 37767 TLRRRQAKST 10 151 406.2460142958183 0 406.2477599978447 PEAK CID FTMS 0 0 0 8617 114250.8984375 1.0 0 0.0 15 Unmodified _TLRRRQAKST_ REV__ENSG00000273899|ENST00000359114|NOL12;REV__ENST00000493862.5_1_22:38077834-38087340:+|nuORF 1.7422754331352035 0.3961065659209837 1 R 1 -1 1.7827 0.0 0.0 0.21996 0.0 0.0 423.3079027598022 228.03937708072505 651.3472798405272 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.21996 + + 4 + 1 2.085 94463.9 1.0 5064 3566 8617 DOHH2_400M_050219_1,8632 DOHH2_400M_050219_1,8632,TLRRRQAKST False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8633 48.911 588.0 180990.0 25 0 15676.0 + 32793 SEEPDSWHW 9 133 586.735750255326 0 586.7356445193291 PEAK CID FTMS 0 0 0 8617 107476.9140625 1.0 0 0.0 16 Unmodified _SEEPDSWHW_ ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11 89.42679046578446 0.0142800208861281 1 EPDSWH 6 3 36.024 0.0 0.0 3.0751 0.0 0.0 216.0760249047761 201.06691919498283 417.142944099759 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 1.1989700043360187 0.0 + EPDSWH 3.0751 + + 359 + 1 2.085 82765.2 1.0 5065 3566 8617 DOHH2_400M_050219_1,8633 DOHH2_400M_050219_1,8633,SEEPDSWHW True True SEEPDSWHW 48.910886 586.735644519329 767393.3125 8617.0 ENSG00000104133|ENST00000261866|SPG11;;nc|ENSG00000104133|Q96JI7-3|SPG11;;nc|ENSG00000104133|Q96JI7-2|SPG11 8.143365701039633 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8634 48.921 576.0 168130.0 25 0 26744.0 + 43142 VYPLSQLAQV 10 127 559.3144612542673 1116.6143695753344 2 559.3134033083916 MULTI CID FTMS 0 0 0 8617 86570.859375 0.5960955851334345 -1 0.1434974670410156 17 Unmodified _VYPLSQLAQV_ REV__ENSG00000171792|ENST00000489288|RHNO1;REV__ENST00000464682.2_1_12:2986445-2997622:+|nuORF;REV__nc|ENSG00000171792|Q9BSD3-2|RHNO1 7.289230182591677 0.6929195370588109 1 W 1 -1 10.713 0.0 0.0 0.95945 0.0 0.0 912.5238219452548 0.0 912.5238219452548 0.0 0.117405479247612 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.95945 - 51 + 1 2.085 80363.6 1.0 5066 3566 8617 DOHH2_400M_050219_1,8634 DOHH2_400M_050219_1,8634,VYPLSQLAQV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8635 48.924 152.0 246900.0 25 0 21036.0 + 6568 EALSRGWAL 9 71 501.7727659877857 0 501.7721740603447 PEAK CID FTMS 0 0 0 8617 225556.828125 1.0 0 0.0 18 Unmodified _EALSRGWAL_ ENSG00000127564|ENST00000262300|PKMYT1;ENST00000575981.1_1_16:3022956-3024767:-|nuORF;nc|ENSG00000127564|Q99640-2|PKMYT1;nc|ENSG00000127564|Q99640-3|PKMYT1;nc|ENSG00000127564|Q99640-4|PKMYT1 30.63653989081413 0.1077493867305487 1 {I|L} 1 8 9.877 0.0 0.0 0.98619 0.0 0.0 200.08273869262456 685.3404024713499 885.4231411639744 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 + {I|L} 0.98619 + + 17 + 1 2.085 36661.1 1.0 5067 3566 8617 DOHH2_400M_050219_1,8635 DOHH2_400M_050219_1,8635,EALSRGWAL True True EALSRGWAL 48.923994 501.772174060345 1190088.25 8617.0 nc|ENSG00000127564|Q99640-4|PKMYT1;;nc|ENSG00000127564|Q99640-2|PKMYT1;;ENST00000575981.1_1_16:3022956-3024767:-|nuORF;;ENSG00000127564|ENST00000262300|PKMYT1;;nc|ENSG00000127564|Q99640-3|PKMYT1 0.3495823542277018 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8636 48.939 800.0 90310.0 25 0 5430.6 -1 0 107 974.9620730415996 1947.9095931499992 2 975.4622070193292 MULTI CID FTMS 0 0 0 8617 185628.984375 0.2185621794582158 3 -0.4039306640625 19 1 {[QV]|[N{I|L}]|[RA]|[KV]}TGY{[WT]|[RM]}VQDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 17 -1 + 54.889 0.0 0.0 2.8179 2.8179 69.552 0.0 0.0 0.0 6.642078980768069 6.734709717774528 6.642078980768069 1.955198108940074 0 1.2134679910804405 1.0 0.3807196863200844 0.6861818737241735 {[QV]|[N{I|L}]|[RA]|[KV]}TGY{[WT]|[RM]}VQDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}TGY{[WT]|[RM]}VQWN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]SGY{[WT]|[RM]}VQDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}TGY{[WT]|[RM]}VQDAN{I|L}[DP]{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AGY{[WT]|[RM]}VQDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}{I|L}GY{[WT]|[RM]}VQDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]SGY{[WT]|[RM]}VQWN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}TGY{[WT]|[RM]}VQWN{I|L}[DP]{[QN]|[E{I|L}]|[KN]};[KA]EGY{[WT]|[RM]}VQDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AGY{[WT]|[RM]}VQWN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.8179;2.7175;2.4769;2.4679;2.4127;2.399;2.3765;2.3675;2.363;2.3124 -;-;-;-;-;-;-;-;-;- 2052 1 2.085 54764.4 0.5199999809265137 5068 3566 8617 DOHH2_400M_050219_1,8636 DOHH2_400M_050219_1,8636, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8637 48.953 800.0 138540.0 25 0 26294.0 43081 VYLRLRHIDGR 11 122 699.4090460504301 1396.80353916766 2 699.4090453982353 MULTI CID FTMS 0 0 0 8617 153710.921875 0.4003916614332537 2 -0.2732963562011719 20 Unmodified _VYLRLRHIDGR_ ENSG00000103507|ENST00000219794|BCKDK;ENST00000394950.7_1_16:31123427-31123583:+|nuORF 2.9952420565917617 0.861016188266951 1 Y 1 10 11.109 0.0 0.0 0.79533 0.0 0.0 1215.729471029768 0.0 1215.729471029768 0.0 1.839883926472972 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.79533 + + 29 + 1 2.085 94270.7 0.699999988079071 5069 3566 8617 DOHH2_400M_050219_1,8637 DOHH2_400M_050219_1,8637,VYLRLRHIDGR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8639 48.958 42.0 1505700.0 25 0 116250.0 + 6438 EAEPHPLWEY 10 87 635.7905454156027 1269.5665378980052 2 635.7909423708916 MULTI CID FTMS 0 0 0 8638 1248073.875 0.9131863102597324 1 -0.1379127502441406 1 Unmodified _EAEPHPLWEY_ ENSG00000132600|ENST00000441236|PRMT7;ENST00000568463.1_1_16:68389580-68391124:+|nuORF;ENST00000568975.5_1_16:68386292-68391124:+|nuORF;nc|ENSG00000132600|Q9NVM4-2|PRMT7;nc|ENSG00000132600|Q9NVM4-3|PRMT7 55.23464941255904 0.0494277333541689 1 [WE]{[ET]|[MV]}P{I|L}W{M(Oxidation (M))|F}Y 9 4 + 55.072 0.0 0.0 4.3378 4.3378 77.928 0.0 0.0 0.0 9.392653074926043 14.973024840566469 9.392653074926043 5.721740651475642 0 0.5 1.2218487496163564 0.5 0.0 [WE]{[ET]|[MV]}P{I|L}W{M(Oxidation (M))|F}Y;[WE][{M(Oxidation (M))|F}T][{I|L}P]WEY;[WE]{[ET]|[MV]}P{I|L}{[CT]|[{M(Oxidation (M))|F}G]}EY;[WE]{[ET]|[MV]}P{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}WE{[CP]|[EA]}EY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}WP[MT]EY;[WE][{I|L}P][{M(Oxidation (M))|F}T]WEY;[YE][RD][{I|L}P]WEY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}WP[DV]{M(Oxidation (M))|F}Y;[WE]{[ET]|[MV]}PV{[MS]|[{M(Oxidation (M))|F}A]}EY 4.3378;3.8872;3.7693;3.6125;3.598;3.4961;3.4306;3.4025;3.3394;3.1563 -;-;-;-;-;-;-;-;-;- 1044 1 2.095 52370.6 1.0 5070 3567 8638 DOHH2_400M_050219_1,8639 DOHH2_400M_050219_1,8639,EAEPHPLWEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8640 48.96 121.0 449850.0 25 0 64736.0 + 20639 LLPSHPLEL 9 75 509.7988543259962 1017.5831557187925 2 510.2990295290947 MULTI CID FTMS 0 0 0 8638 199771.28125 0.4146206304325196 2 -0.2685470581054687 2 Unmodified _LLPSHPLEL_ ENSG00000132963|ENST00000380842|POMP 16.942295170755138 0.3780752226737986 1 {I|L}{I|L}[C(Carbamidomethyl (C))Q]{I|L}{I|L} 6 5 23.913 0.0 0.0 2.35 0.0 0.0 0.0 274.142995534538 274.142995534538 8.138181262758264 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}[C(Carbamidomethyl (C))Q]{I|L}{I|L} 2.35 - 124 1 2.095 46706.3 1.0 5071 3567 8638 DOHH2_400M_050219_1,8640 DOHH2_400M_050219_1,8640,LLPSHPLEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8641 48.962 18.0 4309900.0 25 0 708250.0 + -1 VMILMLVLL 9 59 538.82674455995 1075.6389361867 2 538.8270751833916 MULTI CID FTMS 0 0 0 8638 3266235.5 0.2861369712333936 -1 0.1353836059570312 3 2 Oxidation (M) _VM(Oxidation (M))ILM(Oxidation (M))LVLL_ REV__ENSG00000112195|ENST00000483722|TREML2 28.17323086031832 0.1727213568982648 1 PV{I|L}Y{I|L}{I|L} 6 -1 46.503 0.0 0.0 4.3233 0.0 0.0 359.18867690254064 0.0 359.18867690254064 0.0 32.69077524932108 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 PV{I|L}Y{I|L}{I|L} 4.3233 - 181 1 2.095 61650.6 1.0 5072 3567 8638 DOHH2_400M_050219_1,8641 DOHH2_400M_050219_1,8641,VMILMLVLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8642 48.963 48.0 922290.0 25 0 340480.0 + 24690 MMKSMTVPF 9 62 536.2557330937954 1070.4969132543906 2 536.2557861208916 MULTI CID FTMS 0 0 0 8638 1050979.375 0.4894901354857039 -1 0.1353836059570312 4 Unmodified _MMKSMTVPF_ ENST00000512561.5_1_5:68651732-68651771:-|nuORF 30.63653989081413 0.1413794767160703 1 {[{M(Oxidation (M))|F}D]|MM}RKMMP{M(Oxidation (M))|F} 8 4 + 64.43 0.0 0.0 6.0187 6.0187 85.044 0.0 0.0 0.0 12.073259432077563 7.034021960761265 7.034021960761265 6.7609125905568135 0 0.6549471895720985 1.6989700043360187 1.8494850021680087 0.0 {[{M(Oxidation (M))|F}D]|MM}RKMMP{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}KRMMP{M(Oxidation (M))|F};[YV]MMKV[WD];{[MS]|[{M(Oxidation (M))|F}A]}TVKMMP{M(Oxidation (M))|F};[YV]MMVK[WD];[YV]MMRR{[ES]|[DT]|[{I|L}C]};{[{M(Oxidation (M))|F}D]|MM}KS{[TV]|[{I|L}S]}MP{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}KV{[MG]|[TS]}MP{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}TKVMMP{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}RYQVP{M(Oxidation (M))|F} 6.0187;5.3871;4.8909;4.6326;4.0521;4.027;3.9833;3.8439;3.7938;3.6064 -;-;-;-;-;-;-;-;-;- 376 1 2.095 47008.3 1.0 5073 3567 8638 DOHH2_400M_050219_1,8642 DOHH2_400M_050219_1,8642,MMKSMTVPF False True MMKSMTVPF 48.962917 536.255786120892 12727705.0 8638.0 ENST00000512561.5_1_5:68651732-68651771:-|nuORF -0.0411570568879445 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8643 48.964 54.0 1382700.0 25 0 380220.0 + -1 VMILMLVLL 9 67 359.5537836531696 1075.6395215597088 3 359.5535766482353 MULTI CID FTMS 0 0 0 8638 998567.5625 0.305744285402854 -1 0.1353836059570312 5 2 Oxidation (M) _VM(Oxidation (M))ILM(Oxidation (M))LVLL_ REV__ENSG00000112195|ENST00000483722|TREML2 13.90604991867851 0.4602628045680013 1 {I|L}{I|L}VPD{I|L}{I|L} 7 -1 23.492 0.0 0.0 2.184 0.0 0.0 294.1607866515148 0.0 294.1607866515148 0.0 11.809866658179118 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.0 {I|L}{I|L}VPD{I|L}{I|L} 2.184 - 163 + 1 2.095 64422.8 1.0 5074 3567 8638 DOHH2_400M_050219_1,8643 DOHH2_400M_050219_1,8643,VMILMLVLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8644 48.967 141.0 857080.0 25 0 200710.0 44307 YLLVPPLM 8 91 473.2796230215676 944.5446931099352 2 473.2795593142509 MULTI CID FTMS 0 0 0 8638 353085.9375 0.2844614594154974 -1 0.1353836059570312 6 Unmodified _YLLVPPLM_ ENSG00000278870|ENST00000623849|OR51G1 32.45364647766026 0.3613649037604678 1 {I|L}Y{I|L}VP{M(Oxidation (M))|F} 6 4 61.653 0.0 0.0 6.5273 0.0 0.0 0.0 209.12891565494377 209.12891565494377 50.39381281052492 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 {I|L}Y{I|L}VP{M(Oxidation (M))|F} 6.5273 - 173 + 1 2.095 97231.2 1.0 5075 3567 8638 DOHH2_400M_050219_1,8644 DOHH2_400M_050219_1,8644,YLLVPPLM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8645 48.971 180.0 413200.0 25 0 34979.0 + 29029 QEFDFIKSY 9 97 588.7822487009422 1175.5499444686843 2 588.7822753787041 MULTI CID FTMS 0 0 0 8638 280110.78125 1.0 0 0.0 7 Unmodified _QEFDFIKSY_ ENSG00000129173|ENST00000250024|E2F8 61.60191391372663 0.0251951588191061 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}KSY 9 0 + 53.356 0.0 0.0 4.5389 4.5389 87.836 0.0 0.0 0.0 36.01464731531564 14.973024840566469 14.973024840566469 50.22283485483939 0 0.6747425010840047 0.0 0.5796896906561032 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}KSY;[QA][KS]{I|L}{M(Oxidation (M))|F}[HN][MT] 4.5389;0.26657 +;- + 316 + 1 2.095 60259.5 1.0 5076 3567 8638 DOHH2_400M_050219_1,8645 DOHH2_400M_050219_1,8645,QEFDFIKSY True True QEFDFIKSY 48.970633 588.782275378704 1821084.125 8638.0 ENSG00000129173|ENST00000250024|E2F8 7.827781359354655 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8646 48.973 92.0 570900.0 25 0 40985.0 + 25518 NENSLFKSL 9 97 526.273878497511 1050.5332040618218 2 526.2752563357353 MULTI CID FTMS 0 0 0 8638 229523.953125 0.3333170791655272 -1 0.1353836059570312 8 Unmodified _NENSLFKSL_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 49.52724829834842 0.0414064571532091 1 {[QD]|[EN]|[WG]|[KD]|[RS]}NS{I|L}{M(Oxidation (M))|F}KS{I|L} 9 0 + 43.591 0.0 0.0 4.1494 4.1494 75.226 0.0 0.0 0.0 25.543190878334705 14.069283436142657 14.069283436142657 3.4879629813551176 0 0.9802046884880936 0.0 0.2396518287104437 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}NS{I|L}{M(Oxidation (M))|F}KS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}NS{I|L}{M(Oxidation (M))|F}SK{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GGS{I|L}{M(Oxidation (M))|F}KS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GGS{I|L}{M(Oxidation (M))|F}SK{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}NS{I|L}[YK]A{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[WK]{M(Oxidation (M))|F}KS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[WQ]{M(Oxidation (M))|F}KS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[WK]{M(Oxidation (M))|F}SK{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[WQ]{M(Oxidation (M))|F}SK{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GGS{I|L}[YK]A{I|L} 4.1494;3.8174;3.2729;2.9408;2.7732;2.4382;2.4382;2.1062;2.1062;1.8967 +;-;-;-;-;-;-;-;-;- + 303 + 1 2.095 43678.2 1.0 5077 3567 8638 DOHH2_400M_050219_1,8646 DOHH2_400M_050219_1,8646,NENSLFKSL True True NENSLFKSL 48.972669 526.275256335735 1768420.125 8638.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 5.222401301066081 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8647 48.976 199.0 449920.0 25 0 33931.0 + 31308 RMDNIYFEY 9 73 625.7787741247861 1249.542995316372 2 625.7786132693291 MULTI CID FTMS 0 0 0 8638 241393.546875 1.0 0 0.0 9 Unmodified _RMDNIYFEY_ ENSG00000113318|ENST00000265081|MSH3 22.65808497894818 0.2428932432760099 1 N{I|L}Y{M(Oxidation (M))|F}EY 6 3 51.899 0.0 0.0 4.1534 0.0 0.0 402.1680289661925 0.0 402.1680289661925 0.0 37.2062251842808 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + N{I|L}Y{M(Oxidation (M))|F}EY 4.1534 + + 230 1 2.095 74654.5 1.0 5078 3567 8638 DOHH2_400M_050219_1,8647 DOHH2_400M_050219_1,8647,RMDNIYFEY False True RMDNIYFEY 48.976494 625.778613269329 1519390.75 8638.0 ENSG00000113318|ENST00000265081|MSH3 7.60698938369751 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8648 48.985 460.0 252430.0 25 0 29838.0 + + -1 VMAPRTLLL 9 141 516.3142475947946 1030.613942256389 2 516.3147460818291 MULTI CID FTMS 0 0 0 8638 218255.015625 0.0769344708299038 4 -0.4749488830566406 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))FRGLVTALL_ ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 19.256988751693697 0.3154191944385105 1 ESG{I|L}V[TA]{I|L}{I|L} 9 -1 33.344 0.0 0.0 3.2354 0.0 0.0 129.110232394864 0.0 129.110232394864 0.0 18.740116080571816 0.0 0.0 0 0.6747425010840047 0.0 0.3054621874040891 0.0 ESG{I|L}V[TA]{I|L}{I|L} 3.2354 - 141 + 1 2.095 92881.4 1.0 5079 3567 8638 DOHH2_400M_050219_1,8648 DOHH2_400M_050219_1,8648,FRGLVTALL False False VMAPRTLLL 48.984656 516.314746081829 2143177.75 8638.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 2.060998633503914 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8649 48.992 435.0 548350.0 25 0 28868.0 + 6893 EEFDARWVTY 10 159 658.3011929029051 1314.58783287261 2 658.3008911013603 MULTI CID FTMS 0 0 0 8638 200247.4375 0.0913330393002773 -1 0.1353836059570312 11 Unmodified _EEFDARWVTY_ ENSG00000178741|ENST00000322347|COX5A 74.30644344067612 0.018797905238503 1 EE[WE]RG{M(Oxidation (M))|F}VTY 10 5 + 61.48 0.0 0.0 4.6767 4.6767 80.069 0.0 0.0 0.0 6.890158441838032 12.847714220832422 6.890158441838032 6.6592334719014445 0 1.718765315847925 1.6989700043360187 1.9731975075880328 0.0 EE[WE]RG{M(Oxidation (M))|F}VTY;EE[WE]RK{M(Oxidation (M))|F}EY;[WR]AVTD{M(Oxidation (M))|F}EEY;EE[WE]RGV{M(Oxidation (M))|F}TY;EE[WE]RKE{M(Oxidation (M))|F}Y;EE[WE][VG]R{M(Oxidation (M))|F}TY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RAED{M(Oxidation (M))|F}EEY;{[RE]|[WV]}TRAD{M(Oxidation (M))|F}EEY;[WR]AVS{M(Oxidation (M))|F}EEEY;[WR]AVSE{M(Oxidation (M))|F}EEY 4.6767;4.1702;4.1526;4.1247;4.0567;3.9582;3.9147;3.7736;3.7655;3.7528 -;-;-;-;-;-;-;-;-;- 25482 1 2.095 174443.9 1.0 5080 3567 8638 DOHH2_400M_050219_1,8649 DOHH2_400M_050219_1,8649,EEFDARWVTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8650 48.999 340.0 235910.0 25 0 23629.0 + 33394 SGSDVILHL 9 119 470.7586214981709 939.5026900631416 2 470.7588989138603 MULTI CID FTMS 0 0 0 8638 174362.453125 1.0 0 0.0 12 Unmodified _SGSDVILHL_ ENST00000420969.1_1_2:162360026-162361742:-|nuORF 77.98433622928108 0.0180125044636492 1 [SG]SDV{I|L}{I|L}H{I|L} 9 0 [SG] + + 51.847 20.458 14.201 5.5186 5.5186 58.553 0.0 0.0 0.0 0.0 27.13356356228342 0.0 0.0 0 1.4916440611282626 0.0 0.0 0.0 + + [SG]SDV{I|L}{I|L}H{I|L} 5.5186 + + 238 + 1 2.095 68482.1 1.0 5081 3567 8638 DOHH2_400M_050219_1,8650 DOHH2_400M_050219_1,8650,SGSDVILHL True True SGSDVILHL 48.99856 470.75889891386 1052392.125 8638.0 ENST00000420969.1_1_2:162360026-162361742:-|nuORF 5.831295331319173 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8651 49.004 271.0 158530.0 25 0 11833.0 + 4782 DEMREFQVI 9 74 583.7794497656233 1165.5443465980466 2 583.7795898318291 MULTI CID FTMS 0 0 0 8638 142364.71875 1.0 0 0.0 13 Unmodified _DEMREFQVI_ ENSG00000062194|ENST00000506184|GPBP1;nc|ENSG00000062194|Q86WP2-2|GPBP1;nc|ENSG00000062194|Q86WP2-3|GPBP1;nc|ENSG00000062194|Q86WP2-4|GPBP1 24.99096001346401 0.2132109383330889 1 E{M(Oxidation (M))|F}QV{I|L} 5 4 34.553 0.0 0.0 2.9645 0.0 0.0 531.2122669904312 0.0 531.2122669904312 0.0 19.06804392152253 0.0 0.0 0 0.5 0.0 0.0 0.0 + E{M(Oxidation (M))|F}QV{I|L} 2.9645 + + 68 1 2.095 40373.4 1.0 5082 3567 8638 DOHH2_400M_050219_1,8651 DOHH2_400M_050219_1,8651,DEMREFQVI False True DEMREFQVI 49.003577 583.779589831829 846020.0 8638.0 nc|ENSG00000062194|Q86WP2-3|GPBP1;;nc|ENSG00000062194|Q86WP2-4|GPBP1;;nc|ENSG00000062194|Q86WP2-2|GPBP1;;ENSG00000062194|ENST00000506184|GPBP1 7.236132144927978 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8652 49.017 800.0 268840.0 25 0 16831.0 + 44366 YLRQVNKLW 9 177 610.3488805438022 1218.6832081544044 2 610.3483764529228 MULTI CID FTMS 0 0 0 8638 145200.703125 0.5529868153319327 1 -0.1379127502441406 14 Unmodified _YLRQVNKLW_ REV__ENSG00000198756|ENST00000361927|COLGALT2 7.910154910731844 0.6385446671287552 1 {I|L}Y{I|L} 3 -1 13.812 0.0 0.0 1.1334 0.0 0.0 166.12407837100437 660.3079317682249 826.4320101392293 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y{I|L} 1.1334 - 186 + 1 2.095 158926.0 0.6200000047683716 5083 3567 8638 DOHH2_400M_050219_1,8652 DOHH2_400M_050219_1,8652,YLRQVNKLW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8653 49.032 800.0 119200.0 25 0 22102.0 + 7001 EEIREAFRVF 10 105 648.3411234631235 1294.667693993047 2 648.3405639529228 MULTI CID FTMS 0 0 0 8638 119923.0546875 1.0 0 0.0 15 Unmodified _EEIREAFRVF_ ENSG00000143933|ENST00000272298|CALM2;ENSG00000160014|ENST00000291295|CALM3;ENSG00000178363|ENST00000315238|CALML3;ENSG00000198668|ENST00000356978|CALM1;ENST00000482532.5_1_2:47387917-47389823:-|nuORF;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;ENST00000597868.5_1_19:47104691-47111872:+|nuORF 7.608950283845883 0.6914406445242895 1 EE{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F} 5 6 16.522 0.0 0.0 1.2762 0.0 0.0 0.0 643.3983207843156 643.3983207843156 3.027194418743804 0.0 0.0 0.0 0 0.5 1.154901959985743 0.0 0.0 EE{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F} 1.2762 - 56 1 2.095 77891.9 0.5799999833106995 5084 3567 8638 DOHH2_400M_050219_1,8653 DOHH2_400M_050219_1,8653,EEIREAFRVF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8654 49.046 800.0 87539.0 25 0 18510.0 + 35173 SRSPRRLWLR 10 108 663.8958194908566 1325.7770860485132 2 663.8960449099541 MULTI CID FTMS 0 0 0 8638 89941.0390625 0.1151388716978586 4 -0.4749488830566406 16 Unmodified _SRSPRRLWLR_ REV__chr17:50379567-50380312|47|13.7|0.84|4.02|+|2|EME1,EME1|1 2.9952420565917617 0.7127817445270067 1 Y 1 -1 11.594 0.0 0.0 0.87449 0.0 0.0 1144.7028805815194 0.0 1144.7028805815194 0.0 2.1966634691513143 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.87449 - 65 + 1 2.095 64325.1 0.5199999809265137 5085 3567 8638 DOHH2_400M_050219_1,8654 DOHH2_400M_050219_1,8654,SRSPRRLWLR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8655 49.053 348.0 274560.0 25 0 32151.0 17087 KLESKIREHLG 11 155 655.3823448852442 1308.7501368372882 2 655.3813354372978 MULTI CID FTMS 0 0 0 8638 304209.4375 0.1561551791433047 5 -0.5730934143066406 17 Unmodified _KLESKIREHLG_ ENST00000402024.2_1_6:116779363-116779789:-|nuORF 2.282774691075616 0.8643776557276657 1 {[HG]|PP}QQ{I|L} 5 10 16.198 0.0 0.0 1.2377 0.0 0.0 0.0 742.4438373590257 742.4438373590257 9.208187539523747 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}QQ{I|L} 1.2377 - 222 1 2.095 81884.8 1.0 5086 3567 8638 DOHH2_400M_050219_1,8655 DOHH2_400M_050219_1,8655,KLESKIREHLG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8656 49.068 800.0 55093.0 25 0 12319.0 -1 0 53 1029.1593772313013 3084.456302294104 3 1030.164355456829 MULTI CID FTMS 0 0 0 8638 194521.6875 1.0 0 0.0 18 1 [MN]E 3 -1 22.932 0.0 0.0 0.74346 0.0 0.0 0.0 2707.308083870529 2707.308083870529 15.94212497064703 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MN]E 0.74346 - 21 1 2.095 40833.7 0.6700000166893005 5087 3567 8638 DOHH2_400M_050219_1,8656 DOHH2_400M_050219_1,8656, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8657 49.077 532.0 180280.0 25 0 14830.0 + 33081 SEIKPPNLF 9 145 522.8003160677929 1043.5860792023857 2 522.2989990115166 MULTI CID FTMS 0 0 0 8638 102030.859375 1.0 0 0.0 19 Unmodified _SERKKHIF_ nc|ENSG00000076685|P49902-2|NT5C2;ENSG00000076685|ENST00000404739|NT5C2 10.183394434864962 0.7604730176254005 1 [NP]P{I|L}T 5 7 16.611 0.0 0.0 1.5917 0.0 0.0 0.0 518.2941229858419 518.2941229858419 3.7136726815356784 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.1505149978319906 [NP]P{I|L}T 1.5917 - 460 1 2.095 77755.5 1.0 5088 3567 8638 DOHH2_400M_050219_1,8657 DOHH2_400M_050219_1,8657,SERKKHIF False False SEIKPPNLF 49.076956 522.298999011517 947222.3125 8638.0 nc|ENSG00000076685|P49902-2|NT5C2;;ENSG00000076685|ENST00000404739|NT5C2 5.159973780314128 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8658 49.091 800.0 44075.0 25 0 2890.3 -1 0 51 1035.1625290806987 3102.4657578422966 3 1035.825122058392 MULTI CID FTMS 0 0 0 8638 95941.2109375 0.1094405370178457 5 -0.5730934143066406 20 1 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}V]E 5 -1 5.2018 0.0 0.0 0.16767 0.0 0.0 0.0 2497.174595082784 2497.174595082784 0.5977185236079654 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}V]E 0.16767 - 11 1 2.095 33216.6 0.5099999904632568 5089 3567 8638 DOHH2_400M_050219_1,8658 DOHH2_400M_050219_1,8658, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8660 49.108 800.0 107360.0 25 0 26593.0 + 30236 QWSRLRRRAGR 11 102 721.4219147625729 1440.8292765919457 2 721.4202758669853 MULTI CID FTMS 0 0 0 8659 142509.828125 0.5800518779919582 -1 0.1379127502441406 1 Unmodified _QWSRLRRRAGR_ REV__ENST00000343028.8_3_12:27167184-27167292:-|nuORF 1.3295316138638542 0.8688751186870782 1 {I|L}E 2 -1 9.464 0.0 0.0 0.65684 0.0 0.0 496.2824078277196 699.3842142074989 1195.6666220352186 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E 0.65684 - 27 + 1 2.088 81202.0 0.550000011920929 5090 3568 8659 DOHH2_400M_050219_1,8660 DOHH2_400M_050219_1,8660,QWSRLRRRAGR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8661 49.11 49.0 1254700.0 25 0 143790.0 + 36865 TENDIRVMF 9 85 562.7737091459118 1123.5328653586234 2 562.7740966677666 MULTI CID FTMS 0 0 0 8659 937056.6875 0.6879986736452335 -1 0.1379127502441406 2 Unmodified _TENDIRVMF_ ENSG00000149187|ENST00000687097|CELF1;ENST00000422993.2_1_11:47504376-47508350:-|nuORF;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1 61.60191391372663 0.0251951588191061 1 TEND{I|L}RVM{M(Oxidation (M))|F} 9 0 + 102.91 0.0 0.0 9.1596 9.1596 93.835 0.0 0.0 0.0 70.6490240183044 14.973024840566469 14.973024840566469 9.208187539523747 0 1.742992819099939 2.0 0.3807196863200844 0.7059771852360797 + + TEND{I|L}RVM{M(Oxidation (M))|F};TEGGD{I|L}RVM{M(Oxidation (M))|F};T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MVG[Y{I|L}]{M(Oxidation (M))|F};{[DA]|[EG]}RRVMVM{M(Oxidation (M))|F};{[DA]|[EG]}[RV]RMVM{M(Oxidation (M))|F};[DN][{I|L}V]GVMVM{M(Oxidation (M))|F} 9.1596;8.34;3.6371;3.4961;3.4961;3.3284 +;-;-;-;-;- + 160 + 1 2.088 54637.9 1.0 5091 3568 8659 DOHH2_400M_050219_1,8661 DOHH2_400M_050219_1,8661,TENDIRVMF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8662 49.113 155.0 258400.0 25 0 42004.0 + -1 SLSTFQQMW 9 77 572.2607075776494 1142.5068622220988 2 572.2609741091728 MULTI CID FTMS 0 0 0 8659 308201.40625 1.0 0 0.0 3 Oxidation (M) _SLSTFQQM(Oxidation (M))W_ ENSG00000188219|ENST00000683005|POTEE;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;ENSG00000143632|ENST00000366684|ACTA1;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000163017|ENST00000345517|ACTG2;ENST00000428275.1_1_X:53172047-53172134:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI;ENSG00000184009|ENST00000573283|ACTG1;ENST00000574671.5_1_17:79477718-79478688:-|nuORF 18.13498045792455 0.3457906370836843 1 {[TV]|[{I|L}S]}S 3 -1 26.553 0.0 0.0 2.3241 0.0 0.0 0.0 852.335023193055 852.335023193055 10.355443491087826 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 {[TV]|[{I|L}S]}S 2.3241 + + 64 1 2.088 37580.4 1.0 5092 3568 8659 DOHH2_400M_050219_1,8662 DOHH2_400M_050219_1,8662,SLSTFQQMW False False SLSTFQQMW 49.112889 572.260974109173 870902.375 8659.0 ENSG00000188219|ENST00000683005|POTEE;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;;ENSG00000222038|ENST00000409602|POTEJ;;ENSG00000169067|ENST00000423391|ACTBL2;;ENSG00000163017|ENST00000345517|ACTG2;;ENST00000428275.1_1_X:53172047-53172134:-|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000075624|ENST00000646664|ACTB;;ENSG00000196604|ENST00000409914|POTEF;;ENSG00000107796|ENST00000224784|ACTA2;;ENSG00000159251|ENST00000290378|ACTC1;;ENSG00000196834|ENST00000451531|POTEI;;ENSG00000184009|ENST00000573283|ACTG1;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF 1.7544076014310122 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8663 49.116 160.0 516810.0 25 0 30653.0 + -1 LCVAEARSW 9 103 546.267132235783 1090.519711538366 2 546.2673828005791 MULTI CID FTMS 0 0 0 8659 262171.1875 0.8384154062170521 2 -0.2506752014160156 4 Carbamidomethyl (C) _LC(Carbamidomethyl (C))VAEARSW_ REV__ENST00000541477.5_1_12:7032669-7032828:+|nuORF 30.63653989081413 0.1413794767160703 1 {[WS]|[C(Carbamidomethyl (C)){I|L}]}{[VA]|[{I|L}G]}T{[QV]|[N{I|L}]|[RA]|[KV]}DW 9 -1 + 42.628 0.0 0.0 3.909 3.909 74.823 0.0 0.0 0.0 3.7679593918845375 3.7679593918845375 3.7679593918845375 3.7679593918845375 0 0.9247425010840048 1.2218487496163564 0.3807196863200844 0.3252574989159953 {[WS]|[C(Carbamidomethyl (C)){I|L}]}{[VA]|[{I|L}G]}T{[QV]|[N{I|L}]|[RA]|[KV]}DW;{[CT]|[{M(Oxidation (M))|F}G]}SVQ[RP]DW;[MT]S[RP]QVSW;{[CT]|[{M(Oxidation (M))|F}G]}S[RP]{[QV]|[N{I|L}]|[RA]|[KV]}DW;[YQ]VQ[RP]DW;[MT]S{[QV]|[N{I|L}]|[RA]|[KV]}[RP]SW;[YQ][RP]{[QV]|[N{I|L}]|[RA]|[KV]}DW;[MT]S[RP]QVC(Carbamidomethyl (C)){I|L};[DP]{I|L}K[C(Carbamidomethyl (C))S]VSW;[MT]S{[QV]|[N{I|L}]|[RA]|[KV]}[RP]C(Carbamidomethyl (C)){I|L} 3.909;3.5635;3.3968;3.3851;3.3145;3.2184;3.1361;2.9633;2.8358;2.7849 -;-;-;-;-;-;-;-;-;- 286 1 2.088 66164.5 1.0 5093 3568 8659 DOHH2_400M_050219_1,8663 DOHH2_400M_050219_1,8663,LCVAEARSW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8664 49.122 334.0 601520.0 25 0 131450.0 + 44394 YLVPRGGA 8 115 416.7375449307388 0 416.7374755740166 PEAK CID FTMS 0 0 0 8659 206899.921875 1.0 0 0.0 5 Unmodified _YLVPRGGA_ REV__ENSG00000188747|ENST00000683555|NOXA1;REV__nc|ENSG00000188747|Q86UR1-2|NOXA1;REV__nc|ENSG00000188747|Q86UR1-3|NOXA1 13.50788311687929 0.5021269579892848 1 QPY 3 -1 17.703 0.0 0.0 2.1291 0.0 0.0 358.1860445960495 82.06702600650624 440.2530706025557 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 QPY 2.1291 - 125 + 1 2.088 157136.0 1.0 5094 3568 8659 DOHH2_400M_050219_1,8664 DOHH2_400M_050219_1,8664,YLVPRGGA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8665 49.129 385.0 308230.0 25 0 27401.0 + 7242 EESFSEHLGF 10 123 591.2592860983035 1180.504019263407 2 591.2592651247978 MULTI CID FTMS 0 0 0 8659 155414.015625 0.7748933542620433 -1 0.1379127502441406 6 Unmodified _EESFSEHLGF_ ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 74.42276476219924 0.0187941584752634 1 EES{M(Oxidation (M))|F}SEH{I|L}G{M(Oxidation (M))|F} 10 0 + 63.215 0.0 0.0 5.3549 5.3549 86.757 0.0 0.0 0.0 23.045445768438466 6.624114849486254 6.624114849486254 9.827796776480469 0 0.3494850021680094 2.0 1.066901560044258 0.0 + + EES{M(Oxidation (M))|F}SEH{I|L}G{M(Oxidation (M))|F};EESYAEH{I|L}G{M(Oxidation (M))|F};EES{M(Oxidation (M))|F}[HV]VMG{M(Oxidation (M))|F};EES{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}[HS]G{M(Oxidation (M))|F};EES{M(Oxidation (M))|F}[HV]{[WT]|[RM]}{M(Oxidation (M))|F};EE[HK]{M(Oxidation (M))|F}S{M(Oxidation (M))|F}EE;EE[{I|L}T]D{I|L}G{M(Oxidation (M))|F}EE;[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}S{M(Oxidation (M))|F}G{I|L}MG{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}GS{M(Oxidation (M))|F}{I|L}MG{M(Oxidation (M))|F};EES{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}[HQ]Y 5.3549;4.5224;4.3247;3.7023;3.5688;3.4857;3.3616;3.2022;3.1169;3.0881 +;-;-;-;-;-;-;-;-;- + 1376 + 1 2.088 91615.5 1.0 5095 3568 8659 DOHH2_400M_050219_1,8665 DOHH2_400M_050219_1,8665,EESFSEHLGF True True EESFSEHLGF 49.12903 591.259265124798 913622.4375 8659.0 ENST00000591595.5_1_19:11130023-11172489:+|nuORF;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;;ENSG00000127616|ENST00000344626|SMARCA4;;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 8.075342655181885 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8666 49.143 800.0 212490.0 25 0 15423.0 -1 0 93 807.4033756313463 3225.584396658985 4 807.9044677615166 MULTI CID FTMS 0 0 0 8659 147342.859375 0.6286919541477453 -1 0.1379127502441406 7 1 WN{I|L}PN{[QV]|[N{I|L}]|[RA]|[KV]} 7 -1 45.45 0.0 0.0 1.409 0.0 0.0 2356.2165207015346 0.0 2356.2165207015346 0.0 26.24175720442146 0.0 0.0 0 1.0 0.0 0.0 0.8494850021680094 WN{I|L}PN{[QV]|[N{I|L}]|[RA]|[KV]} 1.409 - 349 1 2.088 127103.9 0.6399999856948853 5096 3568 8659 DOHH2_400M_050219_1,8666 DOHH2_400M_050219_1,8666, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8667 49.148 258.0 209930.0 25 0 23776.0 10939 GALAKAIY 8 88 403.74210032458586 805.4696477159717 2 403.7421142458916 MULTI CID FTMS 0 0 0 8659 145411.890625 1.0 0 0.0 8 Unmodified _GALAKAIY_ ENSG00000264424|ENST00000255381|MYH4 5.230669730166228 0.792582437072536 1 Y 1 7 20.485 0.0 0.0 2.5432 0.0 0.0 624.3951218144077 0.0 624.3951218144077 0.0 4.286662482156345 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + Y 2.5432 + + 12 + 1 2.088 46832.8 1.0 5097 3568 8659 DOHH2_400M_050219_1,8667 DOHH2_400M_050219_1,8667,GALAKAIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8668 49.157 508.0 151470.0 25 0 15752.0 39085 TVYSDKLW 8 107 506.2630088379464 1010.5114647426929 2 506.2682678103447 MULTI CID FTMS 0 0 0 8659 100414.296875 0.7042168866793684 -4 0.5679969787597656 9 Unmodified _TVYSDKLW_ ENSG00000099949|ENST00000646124|LZTR1;ENST00000479606.5_1_22:21333956-21351634:+|nuORF 21.74664581756881 0.5868176546531598 1 {[YC]|[HE]}GVATV{I|L}W 9 7 + 52.585 0.0 0.0 5.2038 5.2038 86.394 0.0 0.0 0.0 7.147642715192504 30.52448802886191 7.147642715192504 10.457574905606748 0 0.0 0.0 1.274227503252014 0.0 {[YC]|[HE]}GVATV{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[YN]V{I|L}W;{[YC]|[HE]}{[QV]|[N{I|L}]|[RA]|[KV]}TV{I|L}W;[HT][PS]ATV{I|L}W;{[CP]|[EA]}[RH]TV{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[MG]|[TS]}AV{I|L}{[CT]|[{M(Oxidation (M))|F}G]};{[CT]|[{M(Oxidation (M))|F}G]}{I|L}V[YN]W{I|L};{[YC]|[HE]}GV[PG]V{I|L}{[CT]|[{M(Oxidation (M))|F}G]};{[YC]|[HE]}GV[RP]{I|L}{[CT]|[{M(Oxidation (M))|F}G]};{[YC]|[HE]}G[RP]V{I|L}{[CT]|[{M(Oxidation (M))|F}G]} 5.2038;4.169;3.9947;3.5016;3.1584;2.0155;2.0143;1.3503;1.0018;1.0018 -;-;-;-;-;-;-;-;-;- 178 1 2.088 64819.9 1.0 5098 3568 8659 DOHH2_400M_050219_1,8668 DOHH2_400M_050219_1,8668,TVYSDKLW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8669 49.172 800.0 120590.0 25 0 7706.3 -1 0 121 898.9230880714217 1795.831623209643 2 898.9245483279228 MULTI CID FTMS 0 0 0 8659 82463.65625 0.4864768951602422 -5 0.6723899841308594 10 1 SYPN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 15 -1 101.47 0.0 0.0 5.6502 0.0 0.0 59.02815073893641 0.0 59.02815073893641 0.0 83.84020515786628 0.0 0.0 0 2.734636880228201 0.0 0.4247425010840047 0.7302046884880937 SYPN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 5.6502 - 6347 + 1 2.088 69427.8 0.5299999713897705 5099 3568 8659 DOHH2_400M_050219_1,8669 DOHH2_400M_050219_1,8669, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8670 49.179 397.0 354390.0 25 0 83014.0 -1 0 60 627.3674848497044 626.3602083831044 1 627.3672363162041 MULTI CID FTMS 0 0 0 8659 156672.234375 0.5187288786728683 -1 0.1379127502441406 11 1 Y 1 -1 15.485 0.0 0.0 2.4721 0.0 0.0 445.2858198106418 0.0 445.2858198106418 0.0 3.4652409518297844 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.4721 - 26 + 1 2.088 105991.5 1.0 5100 3568 8659 DOHH2_400M_050219_1,8670 DOHH2_400M_050219_1,8670, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8671 49.193 800.0 283080.0 25 0 34606.0 + -1 LEQGCEMEGES 11 139 642.7401365929185 1283.4657202526369 2 642.7407104372978 MULTI CID FTMS 0 0 0 8659 152279.703125 1.0 0 0.0 12 Carbamidomethyl (C),Oxidation (M) _LEQGC(Carbamidomethyl (C))EM(Oxidation (M))EGES_ REV__ENSG00000173821|ENST00000582970|RNF213;REV__nc|ENSG00000173821|Q63HN8-4|RNF213;REV__nc|ENSG00000173821|Q63HN8-5|RNF213;REV__nc|ENSG00000173821|Q63HN8|RNF213 5.296884461304476 0.8501568894076437 1 {[QN]|[E{I|L}]|[KN]}KSVW 6 -1 16.946 0.0 0.0 1.3203 0.0 0.0 0.0 538.0433319071868 538.0433319071868 3.485673916077665 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[QN]|[E{I|L}]|[KN]}KSVW 1.3203 - 704 1 2.088 169727.0 0.6899999976158142 5101 3568 8659 DOHH2_400M_050219_1,8671 DOHH2_400M_050219_1,8671,LEQGCEMEGES False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8672 49.208 800.0 52900.0 25 0 7077.7 + 8344 ERRKKRLRSQI 11 92 735.461163535054 1468.9077741369078 2 735.4615356326103 MULTI CID FTMS 0 0 0 8659 94950.3515625 1.0 0 0.0 13 Unmodified _ERRKKRLRSQI_ REV__ENSG00000101191|ENST00000395343|DIDO1;REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1;REV__nc|ENSG00000101191|Q9BTC0-2|DIDO1;REV__nc|ENSG00000101191|Q9BTC0-3|DIDO1 1.1933415558491238 0.8695176722560516 1 {[QS]|[NT]}RT 4 -1 14.147 0.0 0.0 0.96313 0.0 0.0 0.0 993.6518286625516 993.6518286625516 0.0057229266705167 0.0 0.0 0.0 0 0.0 0.0 0.5731074559755159 0.0 {[QS]|[NT]}RT 0.96313 - 52 1 2.088 48470.3 0.5799999833106995 5102 3568 8659 DOHH2_400M_050219_1,8672 DOHH2_400M_050219_1,8672,ERRKKRLRSQI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8673 49.221 800.0 151590.0 25 0 12371.0 -1 LYRMPRRLP 9 126 609.3489533284926 1216.683353723785 2 609.3492309451103 MULTI CID FTMS 0 0 0 8659 102112.2734375 1.0 0 0.0 14 Oxidation (M) _LYRM(Oxidation (M))PRRLP_ ENST00000373518.1_1_X:72347145-72347370:-|nuORF 12.531546534597751 0.4974689918368763 1 [Y{I|L}][WH]{I|L}Y{I|L}P{I|L} 9 -1 + 32.992 0.0 0.0 2.7116 2.7116 82.178 0.0 0.0 0.0 8.013788414931298 20.51764759318208 8.013788414931298 32.991897701582545 0 0.8431585358518168 1.6989700043360187 0.0 0.0 [Y{I|L}][WH]{I|L}Y{I|L}P{I|L} 2.7116 - 91 1 2.088 92511.6 0.5199999809265137 5103 3568 8659 DOHH2_400M_050219_1,8673 DOHH2_400M_050219_1,8673,LYRMPRRLP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8675 49.226 8.0 6102700.0 25 0 814110.0 + + -1 KRGDVIYIL 9 61 538.82674455995 1075.6389361867 2 538.8273193240166 MULTI CID FTMS 0 0 0 8674 5589753.0 0.4896875909170589 1 -0.1200408935546875 1 2 Oxidation (M) _VM(Oxidation (M))ILM(Oxidation (M))LVLL_ ENSG00000005020|ENST00000345317|SKAP2 28.17323086031832 0.1727213568982648 1 PV{I|L}Y{I|L}{I|L} 6 -1 38.365 0.0 0.0 3.5667 0.0 0.0 359.1891957013688 0.0 359.1891957013688 0.0 26.14638779968488 0.0 0.0 0 0.5 0.0 0.0 0.0 PV{I|L}Y{I|L}{I|L} 3.5667 - 125 1 2.088 42003.3 1.0 5104 3569 8674 DOHH2_400M_050219_1,8675 DOHH2_400M_050219_1,8675,VMILMLVLL False False KRGDVIYIL 49.226196 538.827319324017 180515400.0 8674.0 ENSG00000005020|ENST00000345317|SKAP2 2.6521050135294595 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8676 49.227 31.0 1679300.0 25 0 420890.0 -1 RLFPYLII 8 74 359.5537836531696 1075.6395215597088 3 359.5536682009697 MULTI CID FTMS 0 0 0 8674 1523667.375 0.4665208547278616 1 -0.1200408935546875 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RLFPYLII_ ENST00000348564.10_2_1:198676009-198676063:+|nuORF 8.593279151180031 0.7721714526254883 1 Y[HA]V{I|L}Y{I|L}{I|L} 8 -1 22.128 0.0 0.0 2.0572 0.0 0.0 85.08985335517734 0.0 85.08985335517734 0.0 6.64320017660792 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 Y[HA]V{I|L}Y{I|L}{I|L} 2.0572 - 80 1 2.088 47343.5 1.0 5105 3569 8674 DOHH2_400M_050219_1,8676 DOHH2_400M_050219_1,8676,RLFPYLII False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8677 49.229 39.0 1935200.0 25 0 199110.0 + + 24572 MLGLKRLL 8 84 472.3095507274271 942.604548521654 2 472.3098022341728 MULTI CID FTMS 0 0 0 8674 1143918.875 1.0 0 0.0 3 Unmodified _MLGKLRII_ ENST00000589878.5_1_19:34663429-34663453:+|nuORF 24.67388899826682 0.525179942228231 1 M{I|L}G{I|L}K 5 -1 61.81 0.0 0.0 6.5574 0.0 0.0 0.0 397.25751672916255 397.25751672916255 53.22682509756042 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 M{I|L}G{I|L}K 6.5574 - 146 + 1 2.088 64805.9 1.0 5106 3569 8674 DOHH2_400M_050219_1,8677 DOHH2_400M_050219_1,8677,MLGKLRII False False MLGLKRLL 49.228553 472.309802234173 7489125.0 8674.0 ENST00000589878.5_1_19:34663429-34663453:+|nuORF 2.9960542917251587 2.0 False 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 8678 49.23 71.0 899140.0 25 0 196590.0 + 37966 TMLYILLLL 9 78 546.8404787012947 1091.6664044693894 2 546.8405029177666 MULTI CID FTMS 0 0 0 8674 887973.5625 0.7137969380173901 -1 0.1306343078613281 4 Unmodified _TMLYILLLL_ REV__ENSG00000197403|ENST00000641846|OR6N1 0.6014990680409731 0.8936861360942873 1 SW 2 -1 14.949 0.0 0.0 1.3693 0.0 0.0 800.54346243013 0.0 800.54346243013 0.0 9.463950151760656 0.0 0.0 0 0.0 0.0 0.0 0.0 SW 1.3693 - 11 + 1 2.088 55986.3 1.0 5107 3569 8674 DOHH2_400M_050219_1,8678 DOHH2_400M_050219_1,8678,TMLYILLLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8679 49.232 93.0 428170.0 25 0 136690.0 + 29818 QQKRHQRIFL 10 51 677.3959601231061 1352.777367313012 2 677.3957397341728 MULTI CID FTMS 0 0 0 8674 662428.6875 0.568749221239468 1 -0.1200408935546875 5 Unmodified _QQKRHQRIFL_ REV__ENST00000445067.6_1_1:111773457-111773523:+|nuORF 0.4007161486938917 0.7247829448918255 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.088 47176.2 1.0 5108 3569 8674 DOHH2_400M_050219_1,8679 DOHH2_400M_050219_1,8679,QQKRHQRIFL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8680 49.235 125.0 579530.0 25 0 56957.0 + 4726 DEEETYRLW 9 83 620.7775505820812 1239.5405482309625 2 620.7781860232353 MULTI CID FTMS 0 0 0 8674 428422.53125 1.0 0 0.0 6 Unmodified _DEEETYRLW_ ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1095212-1095344:-|nuORF;ENST00000592597.1_1_19:1093873-1095344:-|nuORF 78.7280429016045 0.0178249292250809 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EETYR{I|L}W 9 0 + 77.625 0.0 0.0 6.2624 6.2624 91.336 0.0 0.0 0.0 51.46082806091883 12.98332479720628 12.98332479720628 13.455612550363796 0 1.424742501084005 0.0 0.8494850021680094 0.4247425010840047 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EETYR{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EETY[VG]{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[DP]YR{I|L}W;{[{M(Oxidation (M))|F}D]|MM}[HC]TYR{I|L}W;{[{M(Oxidation (M))|F}D]|MM}E[DP]YR{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[DP]Y[VG]{I|L}W;{[{M(Oxidation (M))|F}D]|MM}[HC]TY[VG]{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}E[MT]{I|L}W;{[{M(Oxidation (M))|F}D]|MM}E[DP]Y[VG]{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{[DA]|[EG]}{I|L}[MT]{I|L}W 6.2624;5.1768;4.0036;3.5807;3.3378;2.9181;2.4952;2.4554;2.2523;1.9693 +;-;-;-;-;-;-;-;-;- + 387 + 1 2.088 59912.7 1.0 5109 3569 8674 DOHH2_400M_050219_1,8680 DOHH2_400M_050219_1,8680,DEEETYRLW True True DEEETYRLW 49.234865 620.778186023235 2988313.0 8674.0 ENST00000586817.5_1_19:1095212-1095344:-|nuORF;;ENST00000592597.1_1_19:1093873-1095344:-|nuORF;;ENSG00000099817|ENST00000615234|POLR2E 7.832480271657308 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8681 49.239 225.0 227560.0 25 0 56930.0 + 16852 KIEIREVKIGW 11 73 685.9091353134543 1369.8037176937084 2 685.9091674685478 MULTI CID FTMS 0 0 0 8674 424130.96875 0.6761041109958825 1 -0.1200408935546875 7 Unmodified _KIEIREVKIGW_ REV__ENSG00000116218|ENST00000367615|NPHS2;REV__nc|ENSG00000116218|Q9NP85-2|NPHS2 1.1933415558491238 0.8695176722560516 1 K 1 -1 2.4743 0.0 0.0 0.18063 0.0 0.0 911.5319109083554 327.1451815240844 1238.6770924324398 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.18063 + + 4 + 1 2.088 51873.0 1.0 5110 3569 8674 DOHH2_400M_050219_1,8681 DOHH2_400M_050219_1,8681,KIEIREVKIGW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8682 49.242 125.0 498750.0 25 0 31461.0 + 11233 GEQGYIRLI 9 96 524.7927883512276 1047.5710237692551 2 524.7934448122978 MULTI CID FTMS 0 0 0 8674 377115.46875 0.9977082224958796 1 -0.1200408935546875 8 Unmodified _GEQGYIRLI_ ENSG00000197329|ENST00000358912|PELI1 47.74868867922204 0.0453060283459952 1 {[DA]|[EG]}QGY{I|L}R{I|L}{I|L} 9 0 + 69.817 0.0 0.0 6.6647 6.6647 89.973 0.0 0.0 0.0 28.683174735333168 8.372505457509973 8.372505457509973 9.208187539523747 0 1.25 2.0 0.0 0.3494850021680094 + + {[DA]|[EG]}QGY{I|L}R{I|L}{I|L};{[DA]|[EG]}[AG]GY{I|L}R{I|L}{I|L};MA{I|L}S[MN]R{I|L}{I|L};MA{I|L}W{[WT]|[RM]}K{I|L};MA{I|L}{[DA]|[EG]}{[WT]|[RM]}K{I|L};{[CT]|[{M(Oxidation (M))|F}G]}VV[MN]R{I|L}{I|L} 6.6647;5.7857;4.177;3.3674;2.4833;0.70213 +;-;-;-;-;- + 120 + 1 2.088 52703.6 1.0 5111 3569 8674 DOHH2_400M_050219_1,8682 DOHH2_400M_050219_1,8682,GEQGYIRLI True True GEQGYIRLI 49.241713 524.793444812298 2585735.25 8674.0 ENSG00000197329|ENST00000358912|PELI1 6.22036075592041 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8683 49.245 184.0 446270.0 25 0 47150.0 + 351 AEASVDPSLSW 11 102 581.274480280958 1160.5344076287158 2 581.2747680544853 MULTI CID FTMS 0 0 0 8674 351579.4375 0.3162085826061167 -1 0.1306343078613281 9 Unmodified _AEASVDPSLSW_ ENSG00000132467|ENST00000254803|UTP3 69.10491478415734 0.0349985100263309 1 {[CP]|[EA]}A{I|L}DA 6 7 25.111 0.0 0.0 2.1638 0.0 0.0 0.0 587.2320144004533 587.2320144004533 4.65227486541373 0.0 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 {[CP]|[EA]}A{I|L}DA 2.1638 - 674 1 2.088 68373.1 1.0 5112 3569 8674 DOHH2_400M_050219_1,8683 DOHH2_400M_050219_1,8683,AEASVDPSLSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8684 49.254 511.0 307680.0 25 0 57646.0 + 41484 VPLSVPRIKT 10 130 555.3538016149328 1108.6930502966654 2 555.3536865115166 MULTI CID FTMS 0 0 0 8674 313420.3125 0.9139467816875116 -1 0.1306343078613281 10 Unmodified _VPLSVPRIKT_ REV__ENSG00000137962|ENST00000260526|ARHGAP29 3.944395688203298 0.708391353636983 1 [VP]{I|L}{M(Oxidation (M))|F}V 5 -1 11.574 0.0 0.0 1.0439 0.0 0.0 0.0 550.3528152715279 550.3528152715279 0.8605700860507213 0.0 0.0 0.0 0 0.0 0.5376020021010439 0.0 0.0 [VP]{I|L}{M(Oxidation (M))|F}V 1.0439 - 77 1 2.088 120292.9 1.0 5113 3569 8674 DOHH2_400M_050219_1,8684 DOHH2_400M_050219_1,8684,VPLSVPRIKT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8685 49.257 141.0 201130.0 25 0 51813.0 26348 NSHLIVHKRIH 11 59 451.93271709627527 1352.776321889026 3 451.9328185915947 MULTI CID FTMS 0 0 0 8674 274018.53125 0.7340436254280027 2 -0.2064018249511718 11 Unmodified _NSHLIVHKRIH_ ENSG00000166704|ENST00000551380|ZNF606 1.1933415558491238 0.8695176722560516 1 {M(Oxidation (M))|F} 1 11 0.088644 0.0 0.0 0.0065527 0.0 0.0 919.5654892247666 283.11896692447505 1202.6844561492417 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.0065527 - 1 + 1 2.088 34438.7 1.0 5114 3569 8674 DOHH2_400M_050219_1,8685 DOHH2_400M_050219_1,8685,NSHLIVHKRIH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8686 49.261 191.0 340080.0 25 0 46444.0 + 20640 LLPSHPLEL 9 102 509.7988543259962 1017.5831557187925 2 509.8011352419853 MULTI CID FTMS 0 0 0 8674 217034.5625 0.6126457503455066 2 -0.2064018249511718 12 Unmodified _LLPSHPLEL_ ENSG00000132963|ENST00000380842|POMP 28.486842064014134 0.1687311288560894 1 {I|L}{I|L}T 3 7 30.942 0.0 0.0 3.0407 0.0 0.0 0.0 687.3377169244749 687.3377169244749 9.618449501357844 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}{I|L}T 3.0407 - 258 + 1 2.088 54729.8 1.0 5115 3569 8674 DOHH2_400M_050219_1,8686 DOHH2_400M_050219_1,8686,LLPSHPLEL False True LLPSHPLEL 49.260792 509.801135241985 10179250.0 8674.0 ENSG00000132963|ENST00000380842|POMP 5.219756762186687 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8687 49.269 455.0 217550.0 25 0 15847.0 + 6439 EAEPHPLWEY 10 100 635.7905454156027 1269.5665378980052 2 635.7910034060478 MULTI CID FTMS 0 0 0 8674 213052.8125 0.1558857337169513 3 -0.3045463562011719 13 Unmodified _EAEPHPLWEY_ ENSG00000132600|ENST00000441236|PRMT7;ENST00000568463.1_1_16:68389580-68391124:+|nuORF;ENST00000568975.5_1_16:68386292-68391124:+|nuORF;nc|ENSG00000132600|Q9NVM4-2|PRMT7;nc|ENSG00000132600|Q9NVM4-3|PRMT7 78.06048673739656 0.0186573233964999 1 [{I|L}P]WE[{M(Oxidation (M))|F}T]WEY 9 7 + 41.771 0.0 0.0 3.2902 3.2902 68.835 0.0 0.0 0.0 0.6787321967485838 12.262897608404655 0.6787321967485838 0.6787321967485838 0 0.7742275032520141 0.744727494896694 1.774227503252014 0.0 [{I|L}P]WE[{M(Oxidation (M))|F}T]WEY;[WE]{[ET]|[MV]}P{I|L}W{M(Oxidation (M))|F}Y;[{I|L}P]WE{[ET]|[MV]}W{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{[CP]|[EA]}[{I|L}P]WEY;[YE][RD][{I|L}P]WEY;[{I|L}P]WEHP{[CP]|[EA]}EY;[WE]{[ET]|[MV]}P{I|L}{[CT]|[{M(Oxidation (M))|F}G]}EY;[WE][{M(Oxidation (M))|F}T][{I|L}P]WEY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}P]WP[MT]EY;[{I|L}P]WE{[ET]|[MV]}{[CT]|[{M(Oxidation (M))|F}G]}EY 3.2902;3.2367;3.1366;2.9987;2.9584;2.8436;2.7454;2.7212;2.647;2.6453 -;-;-;-;-;-;-;-;-;- 505 1 2.088 81762.5 1.0 5116 3569 8674 DOHH2_400M_050219_1,8687 DOHH2_400M_050219_1,8687,EAEPHPLWEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8688 49.283 800.0 107400.0 25 0 22717.0 + 20520 LLLQLLFQWLT 11 112 694.4225253922903 1386.8304978513804 2 694.4226562380791 MULTI CID FTMS 0 0 0 8674 185292.203125 0.6608159106238295 1 -0.1200408935546875 14 Unmodified _LLLQLLFQWLT_ REV__ENSG00000111145|ENST00000228741|ELK3 2.735195868890462 0.8622431031272658 1 Y 1 -1 10.089 0.0 0.0 0.72746 0.0 0.0 1205.756139796496 0.0 1205.756139796496 0.0 4.6040937697618745 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.72746 - 30 + 1 2.088 73800.9 0.7200000286102295 5117 3569 8674 DOHH2_400M_050219_1,8688 DOHH2_400M_050219_1,8688,LLLQLLFQWLT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8689 49.291 454.0 163230.0 25 0 20298.0 + 11330 REVEVVPSNMW 11 84 673.3318478284001 672.3245713618 1 673.3325683474541 MULTI CID FTMS 0 0 0 8674 173696.421875 1.0 0 0.0 15 Unmodified _GFAGPPGA_ ENST00000470910.5_1_3:39142410-39149053:-|nuORF;nc|ENSG00000114745|Q9BQQ3-2|GORASP1;ENSG00000114745|ENST00000319283|GORASP1;nc|ENSG00000114745|Q9BQQ3-3|GORASP1;ENST00000493851.5_1_3:39143979-39149053:-|nuORF;ENST00000441302.6_1_3:39142056-39149053:-|nuORF 2.889219685676258 0.8067950007271085 1 [MN][PS][KP] 6 6 + 18.573 0.0 0.0 2.7626 2.7626 80.983 0.0 0.0 0.0 2.119762964031868 2.3350044929123364 2.119762964031868 18.57341315915271 0 0.0 1.154901959985743 0.0 0.6109243748081782 [MN][PS][KP] 2.7626 - 67 1 2.088 60397.2 1.0 5118 3569 8674 DOHH2_400M_050219_1,8689 DOHH2_400M_050219_1,8689,GFAGPPGA False False REVEVVPSNMW 49.290775 673.332568347454 1082061.5 8674.0 ENST00000470910.5_1_3:39142410-39149053:-|nuORF;;nc|ENSG00000114745|Q9BQQ3-2|GORASP1;;ENSG00000114745|ENST00000319283|GORASP1;;nc|ENSG00000114745|Q9BQQ3-3|GORASP1;;ENST00000493851.5_1_3:39143979-39149053:-|nuORF;;ENST00000441302.6_1_3:39142056-39149053:-|nuORF 8.32654587427775 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8690 49.3 544.0 310410.0 25 0 28716.0 + 40466 VINPEPITL 9 139 498.2920838963945 994.569614859589 2 498.2920410037041 MULTI CID FTMS 0 0 0 8674 165785.265625 0.4794397622253274 -1 0.1306343078613281 16 Unmodified _VINPEPITL_ ENSG00000108021|ENST00000695737|TASOR2 74.92900055777586 0.0191935851694334 1 [{I|L}V]NPEP{I|L}[{I|L}T] 9 0 + 62.993 0.0 0.0 6.3337 6.3337 86.296 0.0 0.0 0.0 6.906846390321732 5.642492736872597 5.642492736872597 6.906846390321732 0 0.9247425010840048 1.6989700043360187 0.0 1.1861818737241734 + + [{I|L}V]NPEP{I|L}[{I|L}T];[EP]P{I|L}NV{I|L}[{I|L}T];[{I|L}V]PNEP{I|L}[{I|L}T];[{I|L}P]VNEP{I|L}[{I|L}T];[EP]N[{I|L}V]P{I|L}[{I|L}T];[{I|L}P][EP]NV{I|L}[{I|L}T];[EP]P[KT]P{I|L}[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}VPEP{I|L}[{I|L}T];[NP]E[{I|L}V]P{I|L}[{I|L}T];[{I|L}V]GGPEP{I|L}[{I|L}T] 6.3337;5.6393;5.484;5.1601;4.6556;4.6296;4.5569;4.2812;4.2192;4.2152 +;-;-;-;-;-;-;-;-;- + 1035 1 2.088 129645.7 1.0 5119 3569 8674 DOHH2_400M_050219_1,8690 DOHH2_400M_050219_1,8690,VINPEPITL True True VINPEPITL 49.300332 498.292041003704 1874080.125 8674.0 ENSG00000108021|ENST00000695737|TASOR2 4.424724340438843 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8691 49.307 269.0 304120.0 25 0 112120.0 + 1348 AKSISTKLKKA 11 63 587.8799997443682 1173.7454465555363 2 587.8801147341728 MULTI CID FTMS 0 0 0 8674 151623.390625 0.6084625091507049 -1 0.1306343078613281 17 Unmodified _AKSISTKLKKA_ REV__ENSG00000182010|ENST00000373789|RTKN2;REV__nc|ENSG00000182010|Q8IZC4-2|RTKN2 0.2690200627634905 0.8738786812967896 1 Y 1 -1 12.474 0.0 0.0 1.0628 0.0 0.0 992.6712563473316 0.0 992.6712563473316 0.0 12.474250108400469 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0628 - 1 + 1 2.088 66065.9 1.0 5120 3569 8674 DOHH2_400M_050219_1,8691 DOHH2_400M_050219_1,8691,AKSISTKLKKA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8692 49.321 800.0 103790.0 25 0 9258.7 + 23192 LSSCLFTLSL 10 121 542.2911052061213 1082.5676574790425 2 542.2919799685478 MULTI CID FTMS 0 0 0 8674 109702.8125 1.0 0 0.0 18 Unmodified _LSSCLFTLSL_ ENST00000447399.6_1_11:9772021-9772270:+|nuORF 19.256988751693697 0.5244284437930726 1 [NS]{I|L}NYA 6 8 28.148 0.0 0.0 2.6001 0.0 0.0 0.0 417.2240389459594 417.2240389459594 8.750612633916997 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 [NS]{I|L}NYA 2.6001 - 359 + 1 2.088 67706.8 0.4799999892711639 5121 3569 8674 DOHH2_400M_050219_1,8692 DOHH2_400M_050219_1,8692,LSSCLFTLSL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8693 49.328 389.0 167520.0 25 0 24262.0 35469 STLQELKLW 9 112 559.3144612542673 1116.6143695753344 2 559.3148071169853 MULTI CID FTMS 0 0 0 8674 111074.53125 0.7648189954091086 2 -0.2064018249511718 19 Unmodified _STLQELKLW_ ENSG00000175267|ENST00000389398|VWA3A 4.3292370932331545 0.7635526921153418 1 Y 1 9 12.218 0.0 0.0 1.0942 0.0 0.0 935.5399504852938 0.0 935.5399504852938 0.0 0.2287874528033739 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0942 - 24 + 1 2.088 54531.4 1.0 5122 3569 8674 DOHH2_400M_050219_1,8693 DOHH2_400M_050219_1,8693,STLQELKLW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8694 49.341 800.0 112100.0 25 0 12803.0 45266 YSDINDINSV 10 126 570.2625106754587 1138.5104684177172 2 570.7657958865166 MULTI CID FTMS 0 0 0 8674 115825.0703125 0.7224452898696914 1 -0.1200408935546875 20 Unmodified _YSDINDINSV_ ENSG00000165521|ENST00000554922|EML5;nc|ENSG00000165521|Q05BV3-2|EML5;nc|ENSG00000165521|Q05BV3-4|EML5;nc|ENSG00000165521|Q05BV3|EML5 14.40537977576856 0.6058337302021266 1 [DN]ND{I|L}{[TV]|[{I|L}S]}YW 9 6 + 22.342 0.0 0.0 1.9624 1.9624 67.197 0.0 0.0 0.0 1.4073300379153189 4.771212547196623 1.4073300379153189 1.249387366082999 0 0.0 0.0 0.0 0.0 [DN]ND{I|L}{[TV]|[{I|L}S]}YW;[DN]NS[YK]VNW;{[DS]|[MA]|[CV]|TT}Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}VNW;[DN]ND{I|L}{[TV]|[{I|L}S]}WY;[DN]NS[YK]VHY;{[DS]|[MA]|[CV]|TT}Y{I|L}[WR]NW;Y[WE]{[QD]|[EN]|[WG]|[KD]|[RS]}VNW;{[DS]|[MA]|[CV]|TT}Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}VHY;[DN]GGD{I|L}{[TV]|[{I|L}S]}YW;{[DS]|[MA]|[CV]|TT}Y{I|L}[RH]YW 1.9624;1.8526;1.6038;1.5433;1.4336;1.2992;1.2141;1.1847;1.1536;1.1445 -;-;-;-;-;-;-;-;-;- 460 + 1 2.088 71788.7 0.5 5123 3569 8674 DOHH2_400M_050219_1,8694 DOHH2_400M_050219_1,8694,YSDINDINSV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8696 49.347 75.0 513330.0 25 0 32311.0 + 6894 EEFDARWVTY 10 65 658.3011929029051 1314.58783287261 2 658.3016845583916 MULTI CID FTMS 0 0 0 8695 439397.875 0.2004097724637967 2 -0.1845054626464843 1 Unmodified _EEFDARWVTY_ ENSG00000178741|ENST00000322347|COX5A 48.56086444690353 0.0885974549041194 1 EE{M(Oxidation (M))|F}DARC(Carbamidomethyl (C)){I|L}{I|L}Y 10 3 + 45.111 0.0 0.0 3.4316 3.4316 82.919 0.0 0.0 0.0 14.392653074926043 5.41833743429045 5.41833743429045 20.95175337211301 0 0.6237125054200234 1.6989700043360187 0.0 0.0 EE{M(Oxidation (M))|F}DARC(Carbamidomethyl (C)){I|L}{I|L}Y;[Y{M(Oxidation (M))|F}]EK[QP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[{M(Oxidation (M))|F}D]|MM}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]WVTY 3.4316;1.8378;1.2022 -;-;- 69 + 1 2.091 37547.8 1.0 5124 3570 8695 DOHH2_400M_050219_1,8696 DOHH2_400M_050219_1,8696,EEFDARWVTY True True EEFDARWVTY 49.347075 658.301684558392 32688766.0 8695.0 ENSG00000178741|ENST00000322347|COX5A 8.755446116129557 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8697 49.349 109.0 680480.0 25 0 65287.0 + 544 AEIEIVKDL 9 89 515.294922889506 1028.575292845812 2 515.3103515505791 MULTI CID FTMS 0 0 0 8695 511507.34375 0.3671608866574823 -1 0.1200408935546875 2 Unmodified _AEIEIVKDL_ ENSG00000122884|ENST00000394890|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1;nc|ENSG00000122884|P13674-3|P4HA1 55.50274090549119 0.0285720310785888 1 {[CP]|[EA]}{I|L}E{I|L}VKD{I|L} 9 0 + 58.841 0.0 0.0 5.7206 5.7206 92.275 0.0 0.0 0.0 27.68237211568909 10.833267986193675 10.833267986193675 58.84102222725673 0 1.3494850021680094 0.0 0.75 0.3054621874040891 + + {[CP]|[EA]}{I|L}E{I|L}VKD{I|L} 5.7206 + + 224 + 1 2.091 60801.1 1.0 5125 3570 8695 DOHH2_400M_050219_1,8697 DOHH2_400M_050219_1,8697,AEIEIVKDL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8698 49.352 98.0 847820.0 25 0 81812.0 + 545 AEIEIVKDL 9 95 515.294922889506 1028.575292845812 2 515.2948486208916 MULTI CID FTMS 0 0 0 8695 511507.34375 0.3671608866574823 -1 0.1200408935546875 3 Unmodified _AEIEIVKDL_ ENSG00000122884|ENST00000394890|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1;nc|ENSG00000122884|P13674-3|P4HA1 47.594388314883695 0.0456443387682827 1 {[CP]|[EA]}{I|L}E{I|L}VKD{I|L} 9 0 + 55.724 0.0 0.0 5.4175 5.4175 90.891 0.0 0.0 0.0 18.31108497878313 13.200302233990442 13.200302233990442 49.29419746390913 0 1.305462187404089 0.0 0.805462187404089 0.0 + + {[CP]|[EA]}{I|L}E{I|L}VKD{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[{M(Oxidation (M))|F}V]{I|L}[VP]{NN|[MP]|[D{I|L}]|[EV]} 5.4175;0.62507 +;- + 372 + 1 2.091 69911.7 1.0 5126 3570 8695 DOHH2_400M_050219_1,8698 DOHH2_400M_050219_1,8698,AEIEIVKDL True True AEIEIVKDL 49.351521 515.294848620892 23107645.5 8695.0 nc|ENSG00000122884|P13674-3|P4HA1;;nc|ENSG00000122884|P13674-2|P4HA1;;ENSG00000122884|ENST00000394890|P4HA1 5.304542223612468 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8699 49.356 251.0 297280.0 25 0 35646.0 + 565 AEIIKNDLW 9 98 551.3010304118961 1100.5875078905922 2 551.3011352419853 MULTI CID FTMS 0 0 0 8695 272971.0625 1.0 0 0.0 4 Unmodified _AEIIKNDLW_ ENSG00000184205|ENST00000375442|TSPYL2;ENST00000553557.5_1_X:53113753-53114504:+|nuORF 41.95555342248728 0.0647214845423414 1 {[CP]|[EA]}AAK{I|L}{[CP]|[EA]}{I|L}W 10 5 + 52.681 0.0 0.0 4.7866 4.7866 73.971 0.0 0.0 0.0 1.059837384595923 9.164539485499256 1.059837384595923 1.059837384595923 0 1.1549471895720984 0.0 0.3807196863200844 1.066901560044258 {[CP]|[EA]}AAK{I|L}{[CP]|[EA]}{I|L}W;[DN]{I|L}K{I|L}{[CP]|[EA]}{I|L}W;[DN]K{I|L}{I|L}{[CP]|[EA]}{I|L}W;[TA]{[QG]|[NA]}{I|L}{I|L}{[CP]|[EA]}{I|L}W;{[CP]|[EA]}AAK{I|L}{I|L}{[CP]|[EA]}W;[DN]{I|L}K{I|L}{I|L}{[CP]|[EA]}W;[TA]{I|L}{[QG]|[NA]}{I|L}{[CP]|[EA]}{I|L}W;[DN]K{I|L}{I|L}{I|L}{[CP]|[EA]}W;[K{I|L}][DN]{I|L}{[CP]|[EA]}{I|L}W;[TA]{[QG]|[NA]}{I|L}{I|L}{I|L}{[CP]|[EA]}W 4.7866;4.6903;4.5303;4.2164;4.1956;4.0993;3.9428;3.9393;3.6472;3.6253 -;-;-;-;-;-;-;-;-;- 337 1 2.091 64010.7 1.0 5127 3570 8695 DOHH2_400M_050219_1,8699 DOHH2_400M_050219_1,8699,AEIIKNDLW True True AEIIKNDLW 49.356208 551.301135241985 1443491.25 8695.0 ENST00000553557.5_1_X:53113753-53114504:+|nuORF;;ENSG00000184205|ENST00000375442|TSPYL2 5.197780132293701 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8700 49.361 279.0 395110.0 25 0 25540.0 + -1 NELMVDHYLC 10 145 655.2808802351859 1308.5472075371715 2 655.2814819216728 MULTI CID FTMS 0 0 0 8695 197969.09375 1.0 0 0.0 5 Carbamidomethyl (C),Oxidation (M) _NELM(Oxidation (M))VDHYLC(Carbamidomethyl (C))_ REV__ENSG00000121406|ENST00000376233|ZNF549;REV__ENSG00000152443|ENST00000317178|ZNF776;REV__ENSG00000152454|ENST00000282308|ZNF256;REV__ENSG00000196724|ENST00000396147|ZNF418;REV__nc|ENSG00000121406|Q6P9A3-2|ZNF549 22.736283301280096 0.4578556481593033 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}D{I|L} 6 -1 41.159 0.0 0.0 3.1454 0.0 0.0 0.0 608.1610201471311 608.1610201471311 18.138181262758263 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}D{I|L} 3.1454 - 277 + 1 2.091 88330.2 1.0 5128 3570 8695 DOHH2_400M_050219_1,8700 DOHH2_400M_050219_1,8700,NELMVDHYLC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8701 49.368 353.0 380740.0 25 0 25105.0 + 328 AEAFEAIPRAL 11 109 594.3249225565293 1186.6352921798584 2 594.3265258669853 MULTI CID FTMS 0 0 0 8695 196970.6875 0.8903676880085123 -1 0.1200408935546875 6 Unmodified _AEAFEAIPRAL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000413611.2_1_1:146675128-146675437:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 53.31671820480216 0.0992620867501809 1 {[CP]|[EA]}A{M(Oxidation (M))|F}EA{I|L}P 8 3 59.505 0.0 0.0 5.0146 0.0 0.0 0.0 355.2103365533813 355.2103365533813 47.51500514161256 0.0 0.0 0.0 0 1.8882104921644447 0.0 0.4247425010840047 0.0 + {[CP]|[EA]}A{M(Oxidation (M))|F}EA{I|L}P 5.0146 + + 425 + 1 2.091 104011.6 1.0 5129 3570 8695 DOHH2_400M_050219_1,8701 DOHH2_400M_050219_1,8701,AEAFEAIPRAL True True AEAFEAIPRAL 49.367737 594.326525866985 1152691.875 8695.0 nc|ENSG00000156261|P50990-3|CCT8;;ENST00000413611.2_1_1:146675128-146675437:-|nuORF;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 6.082833766937256 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8702 49.373 265.0 160450.0 25 0 29759.0 + 17356 KLYERWKKYK 10 84 481.28357468533545 1440.8288946562063 3 481.2833740115166 MULTI CID FTMS 0 0 0 8695 165634.078125 1.0 0 0.0 7 Unmodified _KLYERWKKYK_ ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L 1.4819007175156935 0.719781833666733 1 {I|L} 1 9 6.9897 0.0 0.0 0.48512 0.0 0.0 678.3643693649939 646.3588961236936 1324.7232654886875 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.48512 + + 20 + 1 2.091 43509.8 1.0 5130 3570 8695 DOHH2_400M_050219_1,8702 DOHH2_400M_050219_1,8702,KLYERWKKYK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8703 49.381 498.0 146600.0 25 0 15724.0 + -1 LKFCVRFVAR 10 87 648.3740175025348 1294.7334820718695 2 648.3730346560478 MULTI CID FTMS 0 0 0 8695 134880.875 0.6641289511143293 -2 0.2506752014160156 8 Carbamidomethyl (C) _LKFC(Carbamidomethyl (C))VRFVAR_ REV__ENST00000265631.9_1_7:95750097-95750145:-|nuORF 3.5964929083625545 0.7100006075494749 1 Y 1 -1 11.99 0.0 0.0 0.92604 0.0 0.0 1113.659139275774 0.0 1113.659139275774 0.0 7.363671462829551 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.92604 - 9 + 1 2.091 62611.8 1.0 5131 3570 8695 DOHH2_400M_050219_1,8703 DOHH2_400M_050219_1,8703,LKFCVRFVAR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8704 49.39 492.0 290990.0 25 0 39796.0 14903 ILLFLWSVWS 10 110 632.3621771591804 1262.7098013851607 2 632.3617431521416 MULTI CID FTMS 0 0 0 8695 134600.78125 0.5162781228475176 -1 0.1200408935546875 9 Unmodified _ILLFLWSVWS_ chr12:6975354-6975696|10|26.0|0.58|5.49|+|1|None,EMG1|1 3.944395688203298 0.708391353636983 1 W 1 9 11.783 0.0 0.0 0.93313 0.0 0.0 1058.6194521193388 0.0 1058.6194521193388 0.0 0.6734928694872799 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 0.93313 + + 69 + 1 2.091 109548.3 1.0 5132 3570 8695 DOHH2_400M_050219_1,8704 DOHH2_400M_050219_1,8704,ILLFLWSVWS False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 8705 49.399 502.0 228250.0 25 0 23616.0 + 346 AEAQQLITI 9 140 493.778081300195 985.54160966719 2 493.7797729372978 MULTI CID FTMS 0 0 0 8695 130390.15625 0.5284660579501054 -1 0.1200408935546875 10 Unmodified _AEAQQLITI_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 41.8396318013385 0.0653578398400075 1 {I|L}AHT{I|L} 5 6 26.146 0.0 0.0 2.653 0.0 0.0 432.21661074316506 0.0 432.21661074316506 0.0 2.469165662315689 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}AHT{I|L} 2.653 - 985 + 1 2.091 87898.1 1.0 5133 3570 8695 DOHH2_400M_050219_1,8705 DOHH2_400M_050219_1,8705,AEAQQLITI True True AEAQQLITI 49.398983 493.779772937298 1135874.125 8695.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 2.8885249296824136 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8706 49.413 800.0 156400.0 25 0 5249.9 5923 DQACVPSPG 9 175 437.19102310684815 0 437.1909973025322 PEAK CID FTMS 0 0 0 8695 101508.1328125 1.0 0 0.0 11 Unmodified _DQACVPSPG_ ENSG00000225190|ENST00000430334|PLEKHM1;ENST00000582201.5_1_17:62781409-62811241:-|nuORF 7.289230182591677 0.3433663536648894 1 P{I|L}N 3 8 19.693 0.0 0.0 2.2574 0.0 0.0 111.91906179478788 433.23410206602114 545.1531638608091 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 P{I|L}N 2.2574 - 21 + 1 2.091 103668.9 0.9800000190734864 5134 3570 8695 DOHH2_400M_050219_1,8706 DOHH2_400M_050219_1,8706,DQACVPSPG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8707 49.428 800.0 145020.0 25 0 31231.0 + 37569 TLIILFIFVL 10 115 596.3930000784914 1190.7714472237826 2 596.3939086794853 MULTI CID FTMS 0 0 0 8695 113773.640625 1.0 0 0.0 12 Unmodified _TLIILFIFVL_ REV__ENSG00000121895|ENST00000381938|TMEM156 3.944395688203298 0.708391353636983 1 Y 1 -1 13.099 0.0 0.0 1.1 0.0 0.0 1009.6971502040544 0.0 1009.6971502040544 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1 - 45 + 1 2.091 92319.5 0.5600000023841858 5135 3570 8695 DOHH2_400M_050219_1,8707 DOHH2_400M_050219_1,8707,TLIILFIFVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8709 49.435 242.0 174100.0 25 0 13353.0 + 36866 TENDIRVMF 9 69 562.7737091459118 1123.5328653586234 2 562.7742187380791 MULTI CID FTMS 0 0 0 8708 96681.53125 0.070984782621265 2 -0.2141952514648437 1 Unmodified _TENDIRVMF_ ENSG00000149187|ENST00000687097|CELF1;ENST00000422993.2_1_11:47504376-47508350:-|nuORF;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1 41.95555342248728 0.0647214845423414 1 {[ET]|[MV]}ND{I|L}RVM{M(Oxidation (M))|F} 9 0 + 50.111 0.0 0.0 4.4601 4.4601 82.388 0.0 0.0 0.0 36.61622501717439 12.98332479720628 12.98332479720628 9.208187539523747 0 1.742992819099939 0.0 0.0 0.3807196863200844 + + {[ET]|[MV]}ND{I|L}RVM{M(Oxidation (M))|F};{[ET]|[MV]}GGD{I|L}RVM{M(Oxidation (M))|F} 4.4601;3.6406 +;- + 46 + 1 2.091 38388.3 1.0 5136 3571 8708 DOHH2_400M_050219_1,8709 DOHH2_400M_050219_1,8709,TENDIRVMF True True TENDIRVMF 49.434881 562.774218738079 17581594.0 8708.0 ENST00000422993.2_1_11:47504376-47508350:-|nuORF;;nc|ENSG00000149187|Q92879-6|CELF1;;nc|ENSG00000149187|Q92879-4|CELF1;;nc|ENSG00000149187|Q92879|CELF1;;ENSG00000149187|ENST00000687097|CELF1;;nc|ENSG00000149187|Q92879-3|CELF1;;nc|ENSG00000149187|Q92879-5|CELF1;;nc|ENSG00000149187|Q92879-2|CELF1 6.9887871742248535 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8710 49.449 800.0 105340.0 25 0 22743.0 8708 EVLDRWRRLKA 11 103 721.4219147625729 1440.8292765919457 2 721.4219238162041 MULTI CID FTMS 0 0 0 8708 135859.328125 0.5529826220301739 2 -0.2141952514648437 2 Unmodified _EVLDRWRRLKA_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 2.9952420565917617 0.861016188266951 1 VVEV{I|L} 5 9 22.509 0.0 0.0 1.5622 0.0 0.0 0.0 898.4733555316519 898.4733555316519 4.092568545288064 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 VVEV{I|L} 1.5622 - 175 1 2.091 72942.3 0.7900000214576721 5137 3571 8708 DOHH2_400M_050219_1,8710 DOHH2_400M_050219_1,8710,EVLDRWRRLKA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8711 49.452 142.0 653170.0 25 0 48443.0 34194 SLNRHSQNIW 10 105 418.8842325070243 1253.630868121273 3 418.8841430544853 MULTI CID FTMS 0 0 0 8708 300687.4375 0.6280969864981314 -1 0.0863609313964843 3 Unmodified _SLNRHSQNIW_ ENST00000467303.5_1_3:197431537-197476242:-|nuORF 9.38312468134398 0.6832340498775793 1 Q{[MS]|[{M(Oxidation (M))|F}A]}WN{I|L}W 7 6 20.634 0.0 0.0 1.646 0.0 0.0 290.1882496564469 0.0 290.1882496564469 0.0 6.655010192627131 0.0 0.0 0 0.242992819099939 0.0 0.0 1.0 Q{[MS]|[{M(Oxidation (M))|F}A]}WN{I|L}W 1.646 - 218 1 2.091 79312.1 1.0 5138 3571 8708 DOHH2_400M_050219_1,8711 DOHH2_400M_050219_1,8711,SLNRHSQNIW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8712 49.456 235.0 293440.0 25 0 22127.0 + 10518 FVDPAQITM 9 90 511.2546062903023 1020.4946596474044 2 511.2549316287041 MULTI CID FTMS 0 0 0 8708 266259.625 0.678152337276583 -1 0.0863609313964843 4 Unmodified _FVDPAQITM_ ENSG00000167325|ENST00000300738|RRM1 29.081581746732265 0.1611639662936252 1 [{I|L}T]{M(Oxidation (M))|F}PAQ{I|L}TM 9 3 + 52.659 0.0 0.0 5.1601 5.1601 84.867 0.0 0.0 0.0 11.892404878284268 11.0827208845118 11.0827208845118 9.208187539523747 0 0.8182503180159344 1.3010299956639813 0.2134679910804404 0.0 [{I|L}T]{M(Oxidation (M))|F}PAQ{I|L}TM;[{I|L}T]{M(Oxidation (M))|F}PA[AG]{I|L}TM;[PA]Q{I|L}T{M(Oxidation (M))|F}{I|L}TM;[{M(Oxidation (M))|F}V]DPAQ{I|L}TM;[PA]QDV{M(Oxidation (M))|F}{I|L}TM;[QA]P{I|L}T{M(Oxidation (M))|F}{I|L}TM;[{I|L}T][WE]Q{I|L}TM;[AG]AP{I|L}T{M(Oxidation (M))|F}{I|L}TM;[AG]APDV{M(Oxidation (M))|F}{I|L}TM;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{M(Oxidation (M))|F}V[YV]M 5.1601;4.2578;3.9948;3.5536;3.5536;3.5516;3.4505;3.4502;3.3278;3.2957 -;-;-;+;-;-;-;-;-;- + 766 1 2.091 56497.7 1.0 5139 3571 8708 DOHH2_400M_050219_1,8712 DOHH2_400M_050219_1,8712,FVDPAQITM False True FVDPAQITM 49.455966 511.254931628704 3241953.25 8708.0 ENSG00000167325|ENST00000300738|RRM1 5.640277862548828 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8713 49.462 342.0 491900.0 25 0 33989.0 + 38589 TTDLFGRDLSY 11 130 644.314282454421 1286.614011975642 2 644.3156005740166 MULTI CID FTMS 0 0 0 8708 208969.0625 0.0621389035379666 -2 0.2064018249511718 5 Unmodified _TTDLFGRDLSY_ ENSG00000169813|ENST00000682386|HNRNPF 118.81303886336303 0.0367882507415963 1 TTD{I|L}{M(Oxidation (M))|F}[DV][WK]Y 10 4 + 91.676 0.0 0.0 7.1253 7.1253 89.425 0.0 0.0 0.0 46.35375283470552 1.091444694250697 1.091444694250697 8.863532895842894 0 1.8193415193665468 2.0 1.3274509799928715 0.3252574989159953 TTD{I|L}{M(Oxidation (M))|F}[DV][WK]Y;TTD{I|L}Y[TP][WK]Y;TTD{I|L}{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}[Q{I|L}]MT;TTYM{M(Oxidation (M))|F}[Q{I|L}]{[TV]|[{I|L}S]}[PS];TTD{I|L}{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}[YN][VP];TTYM{M(Oxidation (M))|F}A{[VA]|[{I|L}G]}{[TV]|[{I|L}S]}[PS];TTYM{M(Oxidation (M))|F}[Q{I|L}]{[MG]|[TS]}[VP];TTDYYANKK[PS];TTYM{M(Oxidation (M))|F}A{[VA]|[{I|L}G]}{[MG]|[TS]}[VP];TTYM{M(Oxidation (M))|F}[Q{I|L}]{NN|[MP]|[D{I|L}]|[EV]}[VG] 7.1253;6.4364;5.6265;5.565;5.1531;5.1242;4.9678;4.8617;4.5269;4.4245 -;-;-;-;-;-;-;-;-;- 7401 + 1 2.091 123725.6 1.0 5140 3571 8708 DOHH2_400M_050219_1,8713 DOHH2_400M_050219_1,8713,TTDLFGRDLSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8714 49.476 800.0 161380.0 25 0 36840.0 + 35181 SRSRWLRVPQL 11 112 699.4091105065006 1396.8036680798011 2 699.4091064333916 MULTI CID FTMS 0 0 0 8708 194873.90625 0.2202841045051178 -3 0.3370361328125 6 Unmodified _SRSRWLRVPQL_ REV__ENST00000313050.11_1_9:139361498-139362925:-|nuORF 1.1933415558491238 0.8695176722560516 1 Y 1 -1 9.6777 0.0 0.0 0.69285 0.0 0.0 1215.7296609770651 0.0 1215.7296609770651 0.0 0.6433330456377195 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.69285 - 30 + 1 2.091 110839.0 0.7900000214576721 5141 3571 8708 DOHH2_400M_050219_1,8714 DOHH2_400M_050219_1,8714,SRSRWLRVPQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8715 49.487 615.0 355810.0 25 0 48880.0 + 43634 YALPHAIL 8 166 449.2637069847342 896.5128610362684 2 449.2636291384697 MULTI CID FTMS 0 0 0 8708 139349.28125 0.1431145260388453 -2 0.2064018249511718 7 Unmodified _YALPHAIL_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224051789-224052101:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF 64.08090720244739 0.1161809961245979 1 YA{I|L}PHA{I|L}{I|L} 8 0 + 59.796 0.0 0.0 6.6699 6.6699 91.179 0.0 0.0 0.0 2.356314889730569 9.864940828083562 2.356314889730569 9.771212547196626 0 1.3701523956413708 2.0 0.0 0.0 + + YA{I|L}PHA{I|L}{I|L};YA{I|L}PH{I|L}A{I|L};[HA]P{I|L}YA{I|L}{I|L};[HA]P{I|L}AY{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]Y{I|L}{I|L};[HA]{I|L}PYA{I|L}{I|L};[HA]{I|L}PAY{I|L}{I|L};[{I|L}A]HPYA{I|L}{I|L};[{I|L}A]HPAY{I|L}{I|L};[HA]{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}{I|L} 6.6699;5.58;4.3226;4.3226;4.0616;3.9868;3.9868;3.6932;3.6932;1.5595 +;-;-;-;-;-;-;-;-;- + 328 + 1 2.091 168096.2 1.0 5142 3571 8708 DOHH2_400M_050219_1,8715 DOHH2_400M_050219_1,8715,YALPHAIL True True YALPHAIL 49.486732 449.26362913847 10976991.0 8708.0 ENST00000436287.1_1_1:224051789-224052101:-|nuORF;;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;;ENSG00000075624|ENST00000646664|ACTB;;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;;ENSG00000169067|ENST00000423391|ACTBL2;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF 5.429062366485596 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8716 49.501 800.0 179810.0 25 0 13182.0 + 2267 AQFPSSGRFW 10 130 591.788265832381 1181.5619787315618 2 591.7880737185478 MULTI CID FTMS 0 0 0 8708 107726.2734375 0.8513530709392205 -4 0.4749488830566406 8 Unmodified _AQFPSSGRFW_ ENSG00000176102|ENST00000323959|CSTF3;ENST00000526480.1_1_11:33157665-33182871:-|nuORF;nc|ENSG00000176102|Q12996-2|CSTF3 29.84058131909904 0.2982332456971691 1 [QA]{M(Oxidation (M))|F}PSY 6 5 44.966 0.0 0.0 3.8056 0.0 0.0 0.0 485.2193875430357 485.2193875430357 31.86690318332652 0.0 0.0 0.0 0 1.0 0.0 0.805462187404089 0.0 [QA]{M(Oxidation (M))|F}PSY 3.8056 - 544 + 1 2.091 110037.0 0.5899999737739563 5143 3571 8708 DOHH2_400M_050219_1,8716 DOHH2_400M_050219_1,8716,AQFPSSGRFW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8717 49.511 490.0 212150.0 25 0 15261.0 + 7335 EFKEAFQL 8 133 506.2630088379464 1010.5114647426929 2 506.2608825564384 MULTI CID FTMS 0 0 0 8708 104626.3671875 0.7337566149277852 -1 0.0863609313964843 9 Unmodified _EFKEAFQL_ chr12:56158920-56159587|48|68.02|0.0|22.7|+|2|None,MYL6B|3;ENSG00000092841|ENST00000550697|MYL6;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 54.773552608820026 0.1167943196628344 1 [AG]{I|L}S{M(Oxidation (M))|F}E{M(Oxidation (M))|F}Q{I|L} 9 6 + 27.847 0.0 0.0 2.7557 2.7557 72.772 0.0 0.0 0.0 5.9091263055216565 7.191964632593589 5.9091263055216565 4.771212547196623 0 0.5317183090963749 1.2218487496163564 1.0 0.0 [AG]{I|L}S{M(Oxidation (M))|F}E{M(Oxidation (M))|F}Q{I|L};[AG]{I|L}YAE{M(Oxidation (M))|F}Q{I|L};[Q{I|L}]S{M(Oxidation (M))|F}E{M(Oxidation (M))|F}Q{I|L};[{M(Oxidation (M))|F}T]RAE{M(Oxidation (M))|F}Q{I|L};[AG]{I|L}YEA{M(Oxidation (M))|F}Q{I|L};[{M(Oxidation (M))|F}T]REA{M(Oxidation (M))|F}Q{I|L};[AG]VT{M(Oxidation (M))|F}E{M(Oxidation (M))|F}Q{I|L};[Q{I|L}]YAE{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[QS]|[NT]}{M(Oxidation (M))|F}Q{I|L};{[CP]|[EA]}K{M(Oxidation (M))|F}E{M(Oxidation (M))|F}Q{I|L} 2.7557;2.2836;2.171;2.1291;2.0231;1.8686;1.836;1.6988;1.6813;1.6326 -;-;-;-;-;-;-;-;-;- 868 1 2.091 78169.2 1.0 5144 3571 8708 DOHH2_400M_050219_1,8717 DOHH2_400M_050219_1,8717,EFKEAFQL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8718 49.525 800.0 148260.0 25 0 8521.9 -1 0 111 898.9230880714217 1795.831623209643 2 898.9239990115166 MULTI CID FTMS 0 0 0 8708 89634.046875 0.5287770977823653 -2 0.2064018249511718 10 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}[C(Carbamidomethyl (C))R]QDAN{I|L}NP[YQ] 15 -1 + 74.452 0.0 0.0 4.1458 4.1458 77.343 0.0 0.0 0.0 0.5667360165094948 59.75949072601743 0.5667360165094948 5.776353919965445 0 1.6906140654642814 0.0 0.0 0.8494850021680094 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}[C(Carbamidomethyl (C))R]QDAN{I|L}NP[YQ];[H{I|L}][PA][C(Carbamidomethyl (C))R]QDAN{I|L}NP[YQ];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}[C(Carbamidomethyl (C))R]QWN{I|L}NP[YQ];[HA]P{I|L}[C(Carbamidomethyl (C))R]QDAN{I|L}NP[YQ];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}[C(Carbamidomethyl (C))R]QDAN{I|L}N{M(Oxidation (M))|F}[Q{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}N{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}[C(Carbamidomethyl (C))R]QDAGG{I|L}NP[YQ];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}[C(Carbamidomethyl (C))R][AG]DAN{I|L}NP[YQ];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}[C(Carbamidomethyl (C))R]QDAN{I|L}GGP[YQ];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}N{I|L}NADQ[C(Carbamidomethyl (C))R]{I|L}{[WT]|[RM]} 4.1458;3.8242;3.7733;3.7566;3.6863;3.6613;3.643;3.643;3.643;3.5794 -;-;-;-;-;-;-;-;-;- 2152 1 2.091 82090.2 0.4399999976158142 5145 3571 8708 DOHH2_400M_050219_1,8718 DOHH2_400M_050219_1,8718, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8719 49.526 55.0 778540.0 25 0 127030.0 44050 YINNKAKII 9 71 538.82674455995 1075.6389361867 2 538.3274413943291 MULTI CID FTMS 0 0 0 8708 1302605.375 0.5462971389556357 1 -0.09814453125 11 Unmodified _YINNKAKII_ ENSG00000136011|ENST00000388887|STAB2 4.75600775471527 0.7486543447549536 1 Y{I|L}{I|L} 3 6 15.532 0.0 0.0 1.444 0.0 0.0 668.3973255841812 0.0 668.3973255841812 0.0 6.2631231424415486 0.0 0.0 0 0.5074908058443608 0.0 0.0 0.0 Y{I|L}{I|L} 1.444 - 10 1 2.091 38766.7 1.0 5146 3571 8708 DOHH2_400M_050219_1,8719 DOHH2_400M_050219_1,8719,YINNKAKII False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8721 49.532 139.0 373290.0 25 0 28853.0 + 352 AEASVDPSLSW 11 90 581.274480280958 1160.5344076287158 2 581.2751342654228 MULTI CID FTMS 0 0 0 8720 261503.390625 0.2351946890984627 2 -0.2538986206054687 1 Unmodified _AEASVDPSLSW_ ENSG00000132467|ENST00000254803|UTP3 32.78568957990786 0.3235288296534633 1 SW 2 9 17.959 0.0 0.0 1.5475 0.0 0.0 869.412135151072 0.0 869.412135151072 0.0 2.452271200211697 0.0 0.0 0 0.0 0.0 0.0 0.0 + SW 1.5475 + + 201 + 1 2.091 45483.0 1.0 5147 3572 8720 DOHH2_400M_050219_1,8721 DOHH2_400M_050219_1,8721,AEASVDPSLSW False True AEASVDPSLSW 49.532151 581.275134265423 12980484.0 8720.0 ENSG00000132467|ENST00000254803|UTP3 6.930379708607991 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8722 49.535 130.0 334970.0 25 0 71774.0 + 37967 TMLYILLLL 9 65 546.8404787012947 1091.6664044693894 2 546.8406860232353 MULTI CID FTMS 0 0 0 8720 298640.9375 0.2400623123891064 2 -0.2538986206054687 2 Unmodified _TMLYILLLL_ REV__ENSG00000197403|ENST00000641846|OR6N1 0.6014990680409731 0.8936861360942873 1 SW 2 -1 16.198 0.0 0.0 1.4838 0.0 0.0 800.5443474398957 0.0 800.5443474398957 0.0 16.10924374808178 0.0 0.0 0 0.0 0.0 0.0 0.0 SW 1.4838 - 23 + 1 2.091 41274.4 1.0 5148 3572 8720 DOHH2_400M_050219_1,8722 DOHH2_400M_050219_1,8722,TMLYILLLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8723 49.537 119.0 555780.0 25 0 26778.0 -1 0 93 881.9072348646716 1761.7999167961432 2 881.9059936404228 MULTI CID FTMS 0 0 0 8720 454133.3125 0.1038210149320063 -2 0.1845054626464843 3 1 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 105.96 0.0 0.0 6.0142 6.0142 79.377 0.0 0.0 0.0 5.050756661862508 10.359883374474876 5.050756661862508 1.7415675927848184 0 1.885151878060192 1.5228787452803376 0.7302046884880937 0.7742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YQV{I|L};[QA]HDEAQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQW{M(Oxidation (M))|F}YQV{I|L};[QA]HDEAGAQDA{M(Oxidation (M))|F}YQV{I|L};[QA]DHEAQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QAQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQW{M(Oxidation (M))|F}YQV{I|L};[QA]DHEAGAQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]DA{M(Oxidation (M))|F}YQV{I|L} 6.0142;5.9153;5.7275;5.6344;5.6286;5.6116;5.5345;5.5345;5.5128;5.5016 -;-;-;-;-;-;-;-;-;- 5154 1 2.091 49413.4 1.0 5149 3572 8720 DOHH2_400M_050219_1,8723 DOHH2_400M_050219_1,8723, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8724 49.54 133.0 536090.0 25 0 68256.0 + 381 AEDKPYAELW 10 77 611.2923867894488 1220.5702206456974 2 611.2934448122978 MULTI CID FTMS 0 0 0 8720 258351.96875 0.8435411110920648 -1 0.09814453125 4 Unmodified _AEDKPYAELW_ ENSG00000178802|ENST00000352410|MPI;ENST00000568840.1_1_15:75182430-75185220:+|nuORF;nc|ENSG00000178802|P34949-2|MPI 22.65808497894818 0.4596126414678359 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AE{[QD]|[EN]|[WG]|[KD]|[RS]}AE{I|L}W 10 4 + 48.35 0.0 0.0 3.9613 3.9613 72.249 0.0 0.0 0.0 12.164537177296497 31.694699959806982 12.164537177296497 1.7609125905568137 0 0.4247425010840047 1.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AE{[QD]|[EN]|[WG]|[KD]|[RS]}AE{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AWWAE{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AE{I|L}[NS]E{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AE[WK]E{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[{I|L}T][DN]E{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}EA{[QD]|[EN]|[WG]|[KD]|[RS]}QQW;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YE{I|L}W;{[CP]|[EA]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QD]|[EN]|[WG]|[KD]|[RS]}AE{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AE{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{[CP]|[EA]}W;{[CT]|[{M(Oxidation (M))|F}G]}QQ{I|L}[NS]E{I|L}W 3.9613;3.817;3.468;3.4261;2.5693;2.3876;2.3656;2.0615;1.9328;1.8943 -;-;-;-;-;-;-;-;-;- 301 1 2.091 59606.0 1.0 5150 3572 8720 DOHH2_400M_050219_1,8724 DOHH2_400M_050219_1,8724,AEDKPYAELW False True AEDKPYAELW 49.540028 611.293444812298 2139232.75 8720.0 ENST00000568840.1_1_15:75182430-75185220:+|nuORF;;ENSG00000178802|ENST00000352410|MPI;;nc|ENSG00000178802|P34949-2|MPI 2.9557532525310912 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8725 49.544 218.0 392210.0 25 0 65763.0 + 30139 QVLSRLSTL 9 85 508.8089164150004 1015.6032798968008 2 508.8091308474541 MULTI CID FTMS 0 0 0 8720 251775.515625 0.4314918400287232 -1 0.09814453125 5 Unmodified _QVLSRLSTL_ ENSG00000160961|ENST00000292530|ZNF333 49.55428908609986 0.0413471690215031 1 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S 4 5 53.5 0.0 0.0 5.2678 0.0 0.0 0.0 585.3383883111936 585.3383883111936 29.83114265341112 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.805462187404089 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S 5.2678 + + 120 + 1 2.091 69572.7 1.0 5151 3572 8720 DOHH2_400M_050219_1,8725 DOHH2_400M_050219_1,8725,QVLSRLSTL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8726 49.55 329.0 320980.0 25 0 78228.0 + 8481 ETDEKDFYLYY 11 91 743.3248857893019 1484.6352186454037 2 743.8261596560478 MULTI CID FTMS 0 0 0 8720 224533.765625 0.2422906573162292 -1 0.09814453125 6 Unmodified _ETDEKDFYLYY_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 41.95555342248728 0.1822715950200113 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TWW{M(Oxidation (M))|F}Y{I|L}YY 10 4 + 45.34 0.0 0.0 3.0539 3.0539 73.769 0.0 0.0 0.0 4.884381005764311 21.871987629411294 4.884381005764311 5.044321917401078 0 0.8182503180159344 0.0 2.004432191740108 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TWW{M(Oxidation (M))|F}Y{I|L}YY;{[{M(Oxidation (M))|F}D]|MM}Y{I|L}YYY{I|L}YY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QK{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}Y{I|L}YY;[PS]N{[DS]|[MA]|[CV]|TT}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}Y{I|L}YY;[DP]DE{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V[QT]YY;[DP]DE{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V[DN]YY;[DP]DWW{I|L}V[DN]YY;[Y{M(Oxidation (M))|F}]DK{I|L}[MN][DN]YY;[Y{M(Oxidation (M))|F}]DK{I|L}[MN][QT]YY;{[{M(Oxidation (M))|F}D]|MM}YK{I|L}[MN][QT]YY 3.0539;2.7142;2.584;1.9606;1.9346;1.9346;1.8107;1.694;1.694;1.5754 -;-;-;-;-;-;-;-;-;- 884 1 2.091 80814.5 1.0 5152 3572 8720 DOHH2_400M_050219_1,8726 DOHH2_400M_050219_1,8726,ETDEKDFYLYY False True ETDEKDFYLYY 49.550132 743.3251 15246026.0 8720.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 6.752248446146647 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8727 49.557 365.0 168540.0 25 0 46139.0 + 34014 SLITLRFYNKV 11 89 677.3959601231061 1352.777367313012 2 677.3960449099541 MULTI CID FTMS 0 0 0 8720 179127.953125 0.1537960021425909 4 -0.4555931091308594 7 Unmodified _SLITLRFYNKV_ REV__ENSG00000172031|ENST00000370383|EPHX4 1.1933415558491238 0.8695176722560516 1 W 1 -1 10.278 0.0 0.0 0.75974 0.0 0.0 1148.686468730784 0.0 1148.686468730784 0.0 5.67349286948728 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.75974 - 30 + 1 2.091 61339.5 1.0 5153 3572 8720 DOHH2_400M_050219_1,8727 DOHH2_400M_050219_1,8727,SLITLRFYNKV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8728 49.565 448.0 217250.0 25 0 55905.0 + 41107 VNLVERRAALP 11 83 619.371725476534 1236.728898019868 2 619.3727294802666 MULTI CID FTMS 0 0 0 8720 182169.1875 0.6906930361782991 -1 0.09814453125 8 Unmodified _VNLVERRAALP_ REV__ENST00000358377.6_2_14:73425600-73425693:+|nuORF 1.3295316138638542 0.8688751186870782 1 P 1 -1 4.6041 0.0 0.0 0.37228 0.0 0.0 617.460295580218 519.1800631158811 1136.6403586960992 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.37228 + + 1 + 1 2.091 76130.0 1.0 5154 3572 8720 DOHH2_400M_050219_1,8728 DOHH2_400M_050219_1,8728,VNLVERRAALP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8729 49.574 510.0 207800.0 25 0 26493.0 + -1 DYSDEMEPDY 10 122 640.2177251237903 1278.4208973143805 2 640.2181274294853 MULTI CID FTMS 0 0 0 8720 172086.03125 1.0 0 0.0 9 Oxidation (M) _DYSDEM(Oxidation (M))EPDY_ REV__nc|ENSG00000288674|P49810-3|PSEN2 10.823927491677226 0.6659270209832991 1 {M(Oxidation (M))|F}DD 3 -1 14.168 0.0 0.0 1.1082 0.0 0.0 766.2323729997305 132.04580103092033 898.2781740306508 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.6643943297944485 0.0 {M(Oxidation (M))|F}DD 1.1082 - 184 + 1 2.091 84325.9 1.0 5155 3572 8720 DOHH2_400M_050219_1,8729 DOHH2_400M_050219_1,8729,DYSDEMEPDY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8730 49.582 482.0 134780.0 25 0 33335.0 30951 RKRRQVATLWT 11 80 707.9224120664453 1413.8302711996903 2 707.9223510622978 MULTI CID FTMS 0 0 0 8720 127482.484375 0.3189835771260478 -3 0.3045463562011719 10 Unmodified _RKRRQVATLWT_ ENST00000409822.1_1_2:238486756-238499247:-|nuORF;ENST00000416106.1_1_2:238494070-238499247:-|nuORF 1.1933415558491238 0.8695176722560516 1 Y 1 11 10.837 0.0 0.0 0.76653 0.0 0.0 1232.7558215920717 0.0 1232.7558215920717 0.0 9.728211688387036 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.76653 - 21 + 1 2.091 61520.2 1.0 5156 3572 8720 DOHH2_400M_050219_1,8730 DOHH2_400M_050219_1,8730,RKRRQVATLWT False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8731 49.587 263.0 287220.0 25 0 30553.0 + 32433 SADGTLKLW 9 107 495.7657231187616 989.5168933043232 2 495.7659789919853 MULTI CID FTMS 0 0 0 8720 127812.40625 1.0 0 0.0 11 Unmodified _SADGTLKLW_ ENSG00000120868|ENST00000551964|APAF1;nc|ENSG00000120868|O14727-2|APAF1;nc|ENSG00000120868|O14727-3|APAF1;nc|ENSG00000120868|O14727-4|APAF1;nc|ENSG00000120868|O14727-5|APAF1 45.69961567697781 0.0497987121815769 1 {[SA]|[TG]}D{I|L}[K{I|L}]SAW 9 4 + 60.159 0.0 0.0 6.0796 6.0796 85.674 0.0 0.0 0.0 9.308845489566892 9.208187539523747 9.208187539523747 7.231975075880328 0 1.492992819099939 1.6989700043360187 1.2887254899964358 0.0 {[SA]|[TG]}D{I|L}[K{I|L}]SAW;{[SA]|[TG]}D{I|L}{[SA]|[TG]}K{I|L}W;{[SA]|[TG]}D{[SA]|[TG]}{I|L}K{I|L}W;{[SA]|[TG]}A{[DS]|[MA]|[CV]|TT}{I|L}K{I|L}W;{[DA]|[EG]}S{I|L}[K{I|L}]SAW;{[SA]|[TG]}D{[SA]|[TG]}{I|L}KW{I|L};{[SA]|[TG]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}K{I|L}W;{[DA]|[EG]}S{I|L}{[SA]|[TG]}K{I|L}W;{[SA]|[TG]}A{[DS]|[MA]|[CV]|TT}{I|L}KW{I|L};{[SA]|[TG]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}KW{I|L} 6.0796;5.3488;5.1389;4.9378;4.8288;4.2903;4.2831;4.098;4.0892;3.4345 -;-;+;-;-;-;-;-;-;- + 192 1 2.091 62063.0 1.0 5157 3572 8720 DOHH2_400M_050219_1,8731 DOHH2_400M_050219_1,8731,SADGTLKLW True True SADGTLKLW 49.587071 495.765978991985 625634.5625 8720.0 ENSG00000120868|ENST00000551964|APAF1;;nc|ENSG00000120868|O14727-3|APAF1;;nc|ENSG00000120868|O14727-5|APAF1;;nc|ENSG00000120868|O14727-4|APAF1;;nc|ENSG00000120868|O14727-2|APAF1 4.481992721557617 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8732 49.602 800.0 120230.0 25 0 11034.0 29772 QPTRRIQLSLT 11 108 656.8883798917212 0 656.8884155154228 PEAK CID FTMS 0 0 0 8720 115035.2890625 0.9126536686471952 1 -0.1160507202148437 12 Unmodified _QPTRRIQLSLT_ ENST00000394105.6_1_9:128111695-128112590:+|nuORF 2.735195868890462 0.4761840153648598 1 {M(Oxidation (M))|F} 1 11 0.71334 0.0 0.0 0.05438 0.0 0.0 724.0141732582487 437.6616304986938 1161.6758037569423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.05438 - 3 + 1 2.091 79728.4 0.6200000047683716 5158 3572 8720 DOHH2_400M_050219_1,8732 DOHH2_400M_050219_1,8732,QPTRRIQLSLT False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8733 49.611 494.0 77123.0 25 0 11039.0 43275 WHKIRARKRC 10 78 451.93271709627527 1352.776321889026 3 451.9324828982353 MULTI CID FTMS 0 0 0 8720 96157.375 0.2575873530693555 5 -0.6250877380371094 13 Unmodified _WHKIRARKRC_ ENST00000373279.5_1_10:71392915-71393320:+|nuORF 1.4819007175156935 0.719781833666733 1 {I|L} 1 9 10.713 0.0 0.0 0.79195 0.0 0.0 1221.6813034337508 0.0 1221.6813034337508 0.0 6.73393743112328 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.79195 + + 5 + 1 2.091 39778.0 1.0 5159 3572 8720 DOHH2_400M_050219_1,8733 DOHH2_400M_050219_1,8733,WHKIRARKRC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8734 49.615 234.0 280270.0 25 0 29652.0 355 AEATIVVMLV 10 102 523.3039691440906 1044.5933853549811 2 523.3042480349541 MULTI CID FTMS 0 0 0 8720 93069.03125 0.5286022902776041 -1 0.09814453125 14 Unmodified _AEATIVVMLV_ ENSG00000132698|ENST00000361084|RAB25;ENST00000487325.5_1_1:156038076-156039544:+|nuORF 9.38312468134398 0.6832340498775793 1 VM[{I|L}V] 4 6 16.198 0.0 0.0 1.5506 0.0 0.0 584.3095570294937 0.0 584.3095570294937 0.0 5.713337517843655 0.0 0.0 0 0.0 0.0 0.0 0.0 + VM[{I|L}V] 1.5506 + + 26 1 2.091 55171.3 1.0 5160 3572 8720 DOHH2_400M_050219_1,8734 DOHH2_400M_050219_1,8734,AEATIVVMLV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8735 49.629 800.0 122930.0 25 0 8244.8 + 17454 KNTLLDQFVM 10 122 604.8216322607778 1207.6287115883556 2 604.8219482302666 MULTI CID FTMS 0 0 0 8720 89118.4609375 0.8985980432316613 1 -0.1160507202148437 15 Unmodified _KNTLLDQFVM_ REV__ENSG00000164880|ENST00000404767|INTS1 13.042465956692816 0.6287021003332052 1 M{I|L}V{NN|[MP]|[D{I|L}]|[EV]}{I|L} 6 -1 16.444 0.0 0.0 1.3616 0.0 0.0 0.0 520.2174776666624 520.2174776666624 2.9487194761112114 0.0 0.0 0.0 0 0.2742275032520141 0.6777807052660807 0.4247425010840047 0.0 M{I|L}V{NN|[MP]|[D{I|L}]|[EV]}{I|L} 1.3616 - 182 + 1 2.091 73471.1 0.550000011920929 5161 3572 8720 DOHH2_400M_050219_1,8735 DOHH2_400M_050219_1,8735,KNTLLDQFVM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8736 49.642 677.0 173860.0 25 0 11473.0 + 16608 KEAPFVPVGI 10 138 528.8079752409247 1055.6013975486494 2 528.8083984255791 MULTI CID FTMS 0 0 0 8720 84419.328125 0.90554061592866 -1 0.09814453125 16 Unmodified _KEAPFVPVGI_ ENSG00000181061|ENST00000321331|HIGD1A;nc|ENSG00000181061|Q9Y241-2|HIGD1A 51.41523569358685 0.0718446036348414 1 {[VA]|[{I|L}G]}SAVP{M(Oxidation (M))|F}PVG{I|L} 11 5 + 81.557 0.0 0.0 7.7261 7.7261 82.062 0.0 0.0 0.0 0.5782783459272309 16.575773191777927 0.5782783459272309 0.5782783459272309 0 1.1549471895720984 2.0 1.642159058960253 0.0 {[VA]|[{I|L}G]}SAVP{M(Oxidation (M))|F}PVG{I|L};[VP]GGVYVPVG{I|L};[VP]{M(Oxidation (M))|F}AEKPVG{I|L};[VP]GG[{I|L}T]{M(Oxidation (M))|F}PVG{I|L};[VP]{M(Oxidation (M))|F}A[VS]APVG{I|L};[{I|L}T]NVP{M(Oxidation (M))|F}PVG{I|L};[VP]NVYVPVG{I|L};{[VA]|[{I|L}G]}GTVP{M(Oxidation (M))|F}PVG{I|L};[VP]{M(Oxidation (M))|F}A{[SA]|[TG]}VPVG{I|L};{[VA]|[{I|L}G]}SVAP{M(Oxidation (M))|F}PVG{I|L} 7.7261;7.6713;7.3825;7.3215;7.2785;7.0623;7.0484;7.0003;6.9178;6.7951 -;-;-;-;-;-;-;-;-;- 3677 1 2.091 97784.3 1.0 5162 3572 8720 DOHH2_400M_050219_1,8736 DOHH2_400M_050219_1,8736,KEAPFVPVGI True True KEAPFVPVGI 49.641994 528.808398425579 886947.0625 8720.0 nc|ENSG00000181061|Q9Y241-2|HIGD1A;;ENSG00000181061|ENST00000321331|HIGD1A 6.486721197764079 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8738 49.649 129.0 387120.0 25 0 33346.0 + 546 AEIEIVKDL 9 84 515.294922889506 1028.575292845812 2 515.2951537966728 MULTI CID FTMS 0 0 0 8737 245256.609375 0.176045633082336 2 -0.2228317260742187 1 Unmodified _AEIEIVKDL_ ENSG00000122884|ENST00000394890|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1;nc|ENSG00000122884|P13674-3|P4HA1 34.93206674587334 0.1032771302489716 1 {[CP]|[EA]}{I|L}E{I|L}V 6 3 44.966 0.0 0.0 4.3717 0.0 0.0 0.0 371.1939791315063 371.1939791315063 13.253800256993957 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.4247425010840047 0.0 + {[CP]|[EA]}{I|L}E{I|L}V 4.3717 + + 160 + 1 2.086 47235.1 1.0 5163 3573 8737 DOHH2_400M_050219_1,8738 DOHH2_400M_050219_1,8738,AEIEIVKDL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8739 49.662 800.0 193300.0 25 0 24247.0 12820 GVTIKELDLYL 11 128 632.3621771591804 1262.7098013851607 2 632.3618652224541 MULTI CID FTMS 0 0 0 8737 120587.4453125 0.4625282210604939 2 -0.2228317260742187 2 Unmodified _GVTIKELDLYL_ ENSG00000008441|ENST00000592199|NFIX;nc|ENSG00000008441|Q14938-2|NFIX;nc|ENSG00000008441|Q14938-3|NFIX;nc|ENSG00000008441|Q14938-4|NFIX;nc|ENSG00000008441|Q14938-5|NFIX;nc|ENSG00000008441|Q14938-6|NFIX 5.731851221503515 0.8481046878870278 1 Y 1 10 10.596 0.0 0.0 0.83914 0.0 0.0 1081.6357332472685 0.0 1081.6357332472685 0.0 7.496988247154075 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.83914 + + 28 + 1 2.086 118211.7 0.8199999928474426 5164 3573 8737 DOHH2_400M_050219_1,8739 DOHH2_400M_050219_1,8739,GVTIKELDLYL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8740 49.664 58.0 1222900.0 25 0 156550.0 + 6912 EEFGRFASF 9 85 545.2535201008483 1088.4924872684965 2 545.2539550662041 MULTI CID FTMS 0 0 0 8737 896079.3125 0.624687335411025 -1 0.1160507202148437 3 Unmodified _EEFGRFASF_ ENSG00000204287|ENST00000395388|HLA-DRA 72.96794272382148 0.0199516581995792 1 EE{M(Oxidation (M))|F}G{M(Oxidation (M))|F}[WK]{M(Oxidation (M))|F} 8 3 + 57.829 0.0 0.0 5.3127 5.3127 89.763 0.0 0.0 0.0 33.63290021996811 6.989700043360188 6.989700043360188 28.26606256887672 0 0.3494850021680094 1.6989700043360187 0.0 0.0 EE{M(Oxidation (M))|F}G{M(Oxidation (M))|F}[WK]{M(Oxidation (M))|F};E{M(Oxidation (M))|F}EG{M(Oxidation (M))|F}[WK]{M(Oxidation (M))|F};E{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[DA]|[EG]}[WK]{M(Oxidation (M))|F};EE[YT][KP][WH];E{M(Oxidation (M))|F}{M(Oxidation (M))|F}[H{I|L}][KG][DP];E{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[NV]|[RG]}{[WT]|[RM]};E{M(Oxidation (M))|F}{M(Oxidation (M))|F}S[TA]M{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};E{M(Oxidation (M))|F}{M(Oxidation (M))|F}S[R{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};E{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[NV]|[RG]}A{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{[NV]|[RG]}{M(Oxidation (M))|F}[NG]S{M(Oxidation (M))|F} 5.3127;2.7159;2.007;1.9009;1.7133;1.5687;1.5492;1.5072;1.2872;1.2708 -;-;-;-;-;-;-;-;-;- 487 + 1 2.086 55974.1 1.0 5165 3573 8737 DOHH2_400M_050219_1,8740 DOHH2_400M_050219_1,8740,EEFGRFASF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8741 49.669 289.0 399550.0 25 0 46134.0 + 43466 WVDPYEVSY 9 118 579.2610324094808 1156.5075118857617 2 579.2614623904228 MULTI CID FTMS 0 0 0 8737 479098.59375 1.0 0 0.0 4 Unmodified _WVDPYEVSY_ ENSG00000133639|ENST00000256015|BTG1;ENSG00000159388|ENST00000290551|BTG2 46.020951573049366 0.0490941689151868 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EDREVSY 9 5 + 63.439 0.0 0.0 5.4854 5.4854 75.799 0.0 0.0 0.0 8.37205316164642 5.469837217489513 5.469837217489513 0.5102999566398125 0 1.1549471895720984 1.3979400086720375 0.0 0.3807196863200844 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EDREVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DEREVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EDVWVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DEVWVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVWDVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVDWVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}DWVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}WDVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EDWVVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DEWVVSY 5.4854;5.4413;5.4165;5.3723;5.1562;5.1562;5.1121;5.1121;5.0039;4.9598 -;-;-;-;-;-;-;-;-;- 1807 1 2.086 92473.8 1.0 5166 3573 8737 DOHH2_400M_050219_1,8741 DOHH2_400M_050219_1,8741,WVDPYEVSY True True WVDPYEVSY 49.66916 579.261462390423 2950439.25 8737.0 ENSG00000159388|ENST00000290551|BTG2;;ENSG00000133639|ENST00000256015|BTG1 5.5618157386779785 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8742 49.673 172.0 344390.0 25 0 55324.0 + 33003 SENNIQTIF 9 83 533.2642255259335 1064.513898118667 2 533.2647582888603 MULTI CID FTMS 0 0 0 8737 347981.25 0.5806026955682235 -1 0.1160507202148437 5 Unmodified _SENNIQTIF_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 71.92227651296345 0.0203558744033348 1 {[ES]|[DT]|[{I|L}C]}NN{I|L}QT{I|L}{M(Oxidation (M))|F} 9 0 + 56.129 0.0 0.0 5.2728 5.2728 85.254 0.0 0.0 0.0 12.024597658517052 39.139633292418935 12.024597658517052 9.208187539523747 0 0.8935078169319297 0.0 1.0629529932484498 1.274227503252014 + + {[ES]|[DT]|[{I|L}C]}NN{I|L}QT{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGN{I|L}QT{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NN{I|L}[AG]T{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NGG{I|L}QT{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NGG{I|L}[AG]T{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGN{I|L}[AG]T{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[ES]|[DT]|[{I|L}C]}QT{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NN[WR]{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGGG{I|L}QT{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[ES]|[DT]|[{I|L}C]}[AG]T{I|L}{M(Oxidation (M))|F} 5.2728;4.4078;4.4078;4.4078;3.5468;3.5468;3.3496;2.8688;2.8195;2.4846 +;-;-;-;-;-;-;-;-;- + 180 1 2.086 53811.5 1.0 5167 3573 8737 DOHH2_400M_050219_1,8742 DOHH2_400M_050219_1,8742,SENNIQTIF True True SENNIQTIF 49.672533 533.26475828886 3524870.0 8737.0 nc|ENSG00000150093|P05556-2|ITGB1;;nc|ENSG00000150093|P05556-4|ITGB1;;nc|ENSG00000150093|P05556-5|ITGB1;;ENSG00000150093|ENST00000302278|ITGB1;;nc|ENSG00000150093|P05556-3|ITGB1 6.861160596211751 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8743 49.678 313.0 294600.0 25 0 26226.0 + 9998 FPKEIQML 8 120 503.2754785353772 1004.5364041375544 2 503.2753784060478 MULTI CID FTMS 0 0 0 8737 180585.734375 0.5609802611416411 -1 0.1160507202148437 6 Unmodified _FPKEIQML_ ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;nc|ENSG00000215301|O00571-2|DDX3X 56.17704186161178 0.1143274477948619 1 M{[RE]|[WV]}{I|L}QM{I|L} 7 3 43.803 0.0 0.0 4.3606 0.0 0.0 85.08989913154453 0.0 85.08989913154453 0.0 23.80724096062085 0.0 0.0 0 0.805462187404089 0.0 0.7059771852360797 0.3494850021680094 M{[RE]|[WV]}{I|L}QM{I|L} 4.3606 - 364 1 2.086 74882.2 1.0 5168 3573 8737 DOHH2_400M_050219_1,8743 DOHH2_400M_050219_1,8743,FPKEIQML True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8744 49.692 800.0 116920.0 25 0 22920.0 + 16696 KERSKSRTRRK 11 114 716.4357170262494 1430.8568811192988 2 716.4357787966728 MULTI CID FTMS 0 0 0 8737 173957.921875 0.7785851149512543 -2 0.2141952514648437 7 Unmodified _KERSKSRTRRK_ REV__ENSG00000146963|ENST00000354926|LUC7L2;REV__ENST00000482860.1_1_7:139102272-139107083:+|nuORF;REV__nc|ENSG00000164898|Q96HJ9-2|FMC1;REV__nc|ENSG00000269955|Q9Y383-2|LUC7L2;REV__nc|ENSG00000269955|Q9Y383-3|LUC7L2 2.498486711656943 0.8633599123570009 1 S 1 -1 7.034 0.0 0.0 0.4916 0.0 0.0 715.4466745736082 625.3536692245584 1340.8003437981663 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 S 0.4916 + + 104 + 1 2.086 80847.6 0.699999988079071 5169 3573 8737 DOHH2_400M_050219_1,8744 DOHH2_400M_050219_1,8744,KERSKSRTRRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8745 49.706 800.0 106550.0 25 0 13992.0 8773 EVTEKRLPLWL 11 108 692.4021330015655 1382.789713069931 2 692.4028808474541 MULTI CID FTMS 0 0 0 8737 150571.3125 1.0 0 0.0 8 Unmodified _EVTEKRLPLWL_ ENST00000575234.1_1_16:3355499-3356027:+|nuORF 4.897010918128616 0.8520435188433833 1 Y 1 11 11.42 0.0 0.0 0.82587 0.0 0.0 1201.7154465677809 0.0 1201.7154465677809 0.0 1.8158895120641283 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.82587 - 116 + 1 2.086 69484.0 0.6399999856948853 5170 3573 8737 DOHH2_400M_050219_1,8745 DOHH2_400M_050219_1,8745,EVTEKRLPLWL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8746 49.72 800.0 80013.0 25 0 8300.1 + 31219 RLQHLRTLMQ 10 107 648.3740175025348 1294.7334820718695 2 648.3750488162041 MULTI CID FTMS 0 0 0 8737 135997.96875 0.6696293180157442 1 -0.137847900390625 9 Unmodified _RLQHLRTLMQ_ REV__ENSG00000099381|ENST00000262519|SETD1A 3.2813086475875832 0.7114585191678878 1 Y 1 -1 12.218 0.0 0.0 0.94371 0.0 0.0 1113.6595054867116 0.0 1113.6595054867116 0.0 2.886182038014651 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.94371 - 45 + 1 2.086 57477.8 0.6100000143051147 5171 3573 8737 DOHH2_400M_050219_1,8746 DOHH2_400M_050219_1,8746,RLQHLRTLMQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8747 49.724 115.0 643760.0 25 0 66391.0 + 23398 LTDYDIRFY 9 85 603.2957691138819 1204.5769852945637 2 603.2966796755791 MULTI CID FTMS 0 0 0 8737 115358.03125 0.1529420231322791 -1 0.1160507202148437 10 Unmodified _LTDYDIRFY_ CSNK2A1|p.K229Rfs*15|1|0.27|ENSG00000101266|chr20:489819-489819|C/-|frameshift_variant;ENSG00000101266|ENST00000217244|CSNK2A1;ENSG00000254598|ENST00000528848|CSNK2A3 51.629811660486645 0.0367964933207742 1 {I|L}TDYD{I|L}R{M(Oxidation (M))|F}Y 9 0 + 90.197 0.0 0.0 7.4878 7.4878 90.315 0.0 0.0 0.0 62.29165440352989 9.362915595803004 9.362915595803004 9.01863755803666 0 0.8494850021680094 2.0 0.0 0.4247425010840047 + + {I|L}TDYD{I|L}R{M(Oxidation (M))|F}Y;{I|L}TYDD{I|L}R{M(Oxidation (M))|F}Y;{I|L}T[DN]V[W{M(Oxidation (M))|F}]D[VP];{I|L}T[QT]V[W{M(Oxidation (M))|F}]D[VP];[VP][C(Carbamidomethyl (C))K]{I|L}DYD[VP];[{I|L}T]D[W{M(Oxidation (M))|F}]V[DP]{[NV]|[RG]};[VP][C(Carbamidomethyl (C))K]{I|L}DDY[VP];{[YD]|[{M(Oxidation (M))|F}M]}D[R{I|L}]V[DN][VP];{[YD]|[{M(Oxidation (M))|F}M]}D[R{I|L}]V[DP]{[NV]|[RG]};{[ES]|[DT]|[{I|L}C]}{I|L}[W{M(Oxidation (M))|F}]V[DN][VP] 7.4878;6.7391;4.6599;4.6599;4.1388;3.4559;3.3901;2.6257;1.6706;1.5938 +;-;-;-;-;-;-;-;-;- + 204 + 1 2.086 58333.3 1.0 5172 3573 8737 DOHH2_400M_050219_1,8747 DOHH2_400M_050219_1,8747,LTDYDIRFY True True LTDYDIRFY 49.723599 603.296679675579 3767935.0 8737.0 ENSG00000101266|ENST00000217244|CSNK2A1;;CSNK2A1|p.K229Rfs*15|1|0.27|ENSG00000101266|chr20:489819-489819|C/-|frameshift_variant;;ENSG00000254598|ENST00000528848|CSNK2A3 7.201943079630534 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8748 49.737 800.0 64897.0 25 0 11234.0 + 16664 KELRKSRNLK 10 79 636.3984818804258 1270.7824108276516 2 636.3987914919853 MULTI CID FTMS 0 0 0 8737 91922.4140625 1.0 0 0.0 11 Unmodified _KELRKSRNLK_ REV__ENSG00000106772|ENST00000376718|PRUNE2;REV__ENST00000492157.5_1_9:79438526-79520879:-|nuORF;REV__nc|ENSG00000106772|Q8WUY3-2|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-3|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-4|PRUNE2 1.4819007175156935 0.719781833666733 1 Y 1 -1 13.099 0.0 0.0 1.0308 0.0 0.0 1089.7079764788218 0.0 1089.7079764788218 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0308 - 16 + 1 2.086 48379.7 0.5199999809265137 5173 3573 8737 DOHH2_400M_050219_1,8748 DOHH2_400M_050219_1,8748,KELRKSRNLK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8749 49.746 474.0 195970.0 25 0 17831.0 + 36716 SELGIRVGF 9 117 489.2713761318292 976.5281993304584 2 489.2743408083916 MULTI CID FTMS 0 0 0 8737 87231.453125 0.5115191408756057 -6 0.6891441345214844 12 Unmodified _TDLGKVTMI_ ENST00000381401.10_1_X:1511360-1511447:-|nuORF 18.1463463914782 0.3454829746528889 1 {[ES]|[DT]|[{I|L}C]}{I|L}G{I|L}RVG{M(Oxidation (M))|F} 9 4 + 45.869 0.0 0.0 4.6971 4.6971 72.867 0.0 0.0 0.0 26.40478432233856 14.09256854528806 14.09256854528806 0.4575749056067479 0 0.3807196863200844 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}G{I|L}RVG{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}G{I|L}RR{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}G{I|L}RGV{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}G{I|L}VGVG{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}G{I|L}VGR{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}G{I|L}VGGV{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}G{I|L}[KS]P{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}G{I|L}[Q{I|L}]A{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}G{I|L}[KS]M{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}[RN]{I|L}V{M(Oxidation (M))|F} 4.6971;4.6503;4.3365;4.035;3.9826;3.6743;3.0847;2.6598;2.0183;1.3631 -;-;-;-;-;-;-;-;-;- 131 + 1 2.086 73889.3 1.0 5174 3573 8737 DOHH2_400M_050219_1,8749 DOHH2_400M_050219_1,8749,TDLGKVTMI False False SELGIRVGF 49.745825 489.274340808392 879417.5625 8737.0 ENST00000381401.10_1_X:1511360-1511447:-|nuORF 4.001035213470459 2.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 8750 49.758 704.0 283150.0 25 0 23850.0 -1 0 164 481.2086971910152 480.2014207244152 1 481.2085449099541 MULTI CID FTMS 0 0 0 8737 157897.0625 1.0 0 0.0 13 1 EW{M(Oxidation (M))|F} 3 -1 + 48.659 0.0 0.0 10.133 10.133 95.503 0.0 0.0 0.0 9.961987796517704 9.961987796517704 9.961987796517704 9.961987796517704 0 0.3252574989159953 1.5228787452803376 0.0 0.0 EW{M(Oxidation (M))|F};[WE]{M(Oxidation (M))|F};[NS]N{M(Oxidation (M))|F};[NS]GG{M(Oxidation (M))|F} 10.133;8.0584;3.3136;1.2895 -;-;-;- 33 + 1 2.086 154768.3 1.0 5175 3573 8737 DOHH2_400M_050219_1,8750 DOHH2_400M_050219_1,8750, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8751 49.773 800.0 117200.0 25 0 6051.2 + 30862 RIMEFTTTL 9 143 556.2939074470619 1110.5732619609237 2 556.2943603396416 MULTI CID FTMS 0 0 0 8737 151208.703125 1.0 0 0.0 14 Unmodified _RIMEFTTTL_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 43.77239144664712 0.0547478964384323 1 [{I|L}T]DTV{M(Oxidation (M))|F}TTT{I|L} 10 4 + 75.87 0.0 0.0 6.8316 6.8316 82.359 0.0 0.0 0.0 10.0 58.76026822476644 10.0 2.188105454342804 0 0.5 0.9208187539523752 1.829689690656103 0.0 [{I|L}T]DTV{M(Oxidation (M))|F}TTT{I|L};[{I|L}T]D{I|L}S{M(Oxidation (M))|F}TTT{I|L};{NN|[MP]|[D{I|L}]|[EV]}TTV{M(Oxidation (M))|F}TTT{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}S{M(Oxidation (M))|F}TTT{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}TV{M(Oxidation (M))|F}TTT{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}S{M(Oxidation (M))|F}TTT{I|L};{[TV]|[{I|L}S]}ETV{M(Oxidation (M))|F}TTT{I|L};[PS]{I|L}[MT]{M(Oxidation (M))|F}TTT{I|L};[PS][{M(Oxidation (M))|F}V]V{M(Oxidation (M))|F}TTT{I|L};[{I|L}T][VS]E{M(Oxidation (M))|F}TTT{I|L} 6.8316;6.6346;5.8627;5.6657;5.5424;5.3454;5.288;5.2153;5.2153;5.0996 -;-;-;-;-;-;-;-;-;- 4447 1 2.086 75522.4 0.6299999952316284 5176 3573 8737 DOHH2_400M_050219_1,8751 DOHH2_400M_050219_1,8751,RIMEFTTTL True True RIMEFTTTL 49.77305 556.294360339642 688412.5 8737.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 5.624979337056478 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8752 49.78 379.0 180250.0 25 0 14800.0 + 41050 VMKCIFAGGLW 11 94 408.88061806872776 1223.6200248063833 3 408.8807250857353 MULTI CID FTMS 0 0 0 8737 141265.234375 1.0 0 0.0 15 Unmodified _VMKCIFAGGLW_ REV__ENSG00000186867|ENST00000394427|QRFPR;REV__ENST00000512235.1_1_4:122261523-122301889:-|nuORF 13.90604991867851 0.7458848613461305 1 NW{I|L}W 4 -1 20.846 0.0 0.0 1.7037 0.0 0.0 606.3240833966812 0.0 606.3240833966812 0.0 6.866903183326514 0.0 0.0 0 0.5044321917401079 0.0 0.0 0.5 NW{I|L}W 1.7037 - 93 1 2.086 57576.1 1.0 5177 3573 8737 DOHH2_400M_050219_1,8752 DOHH2_400M_050219_1,8752,VMKCIFAGGLW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8754 49.785 38.0 1135200.0 25 0 73984.0 + 38590 TTDLFGRDLSY 11 58 644.314282454421 1286.614011975642 2 644.3148071169853 MULTI CID FTMS 0 0 0 8753 873994.375 0.2598903948322514 1 -0.0849838256835937 1 Unmodified _TTDLFGRDLSY_ ENSG00000169813|ENST00000682386|HNRNPF 55.24861242081279 0.0885632729458983 1 {M(Oxidation (M))|F}{I|L}D[PS] 5 8 36.026 0.0 0.0 2.8 0.0 0.0 709.3403678077176 0.0 709.3403678077176 0.0 1.3329467548003748 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}D[PS] 2.8 - 46 1 2.086 38392.8 1.0 5178 3574 8753 DOHH2_400M_050219_1,8754 DOHH2_400M_050219_1,8754,TTDLFGRDLSY True True TTDLFGRDLSY 49.784637 644.314807116985 39109376.0 8753.0 ENSG00000169813|ENST00000682386|HNRNPF 9.7030299504598 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8755 49.788 189.0 294440.0 25 0 40567.0 + 43635 YALPHAIL 8 90 449.2637069847342 896.5128610362684 2 449.2634460330009 MULTI CID FTMS 0 0 0 8753 228377.34375 0.2345481441712977 1 -0.0849838256835937 2 Unmodified _YALPHAIL_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224051789-224052101:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF 32.45364647766026 0.3613649037604678 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P 4 4 32.039 0.0 0.0 3.5737 0.0 0.0 0.0 449.25339685611567 449.25339685611567 -2.653631197717985 0.0 -2.653631197717985 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P 3.5737 + + 126 + 1 2.086 47023.1 1.0 5179 3574 8753 DOHH2_400M_050219_1,8755 DOHH2_400M_050219_1,8755,YALPHAIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8756 49.79 60.0 518500.0 25 0 154720.0 + 12275 GRGRRRRQWGL 11 51 699.4091105065006 1396.8036680798011 2 699.4091674685478 MULTI CID FTMS 0 0 0 8753 884648.0625 1.0 0 0.0 3 Unmodified _GRGRRRRQWGL_ REV__ENST00000369754.7_2_6:82462234-82462363:-|nuORF;REV__ENST00000369756.3_2_6:82461889-82462327:-|nuORF 0.3506318815782774 0.8734936314171269 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.086 37413.1 1.0 5180 3574 8753 DOHH2_400M_050219_1,8756 DOHH2_400M_050219_1,8756,GRGRRRRQWGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8757 49.792 83.0 684060.0 25 0 73560.0 + 16698 KESEVFYEL 9 74 572.2823158560473 1142.5500787788944 2 572.2824584841728 MULTI CID FTMS 0 0 0 8753 568182.8125 0.9094093382134336 -1 0.137847900390625 4 Unmodified _KESEVFYEL_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 38.17557092003332 0.0854718145212029 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}YE{I|L} 9 0 + 32.47 0.0 0.0 2.8419 2.8419 72.08 0.0 0.0 0.0 4.433629115396467 4.433629115396467 4.433629115396467 3.80719686320084 0 0.5796896906561032 0.0 1.308211033479455 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}YE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}YE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}[QP]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}YE{I|L};[{I|L}T]AA{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}YE{I|L};[C(Carbamidomethyl (C))K]Y[KT]{[DS]|[MA]|[CV]|TT}E{I|L};{[QN]|[E{I|L}]|[KN]}[YG][KT]Y[RN];[C(Carbamidomethyl (C))K]Y{M(Oxidation (M))|F}{[MG]|[TS]}[QP]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{[MG]|[TS]}{M(Oxidation (M))|F}Y[RN];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{[MG]|[TS]}{M(Oxidation (M))|F}Y[RN] 2.8419;2.5087;2.4539;2.2055;1.6502;1.5378;1.4165;0.66261;0.43889;0.13566 +;-;-;-;-;-;-;-;-;- + 165 1 2.086 46820.3 1.0 5181 3574 8753 DOHH2_400M_050219_1,8757 DOHH2_400M_050219_1,8757,KESEVFYEL True True KESEVFYEL 49.791647 572.282458484173 3832105.0 8753.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 5.174824396769206 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8758 49.794 130.0 352280.0 25 0 61814.0 + 43424 WRMVRARRAPV 11 64 466.6083090903989 1396.8030978713966 3 466.6083251833916 MULTI CID FTMS 0 0 0 8753 394013.84375 1.0 0 0.0 5 Unmodified _WRMVRARRAPV_ REV__ENST00000329905.5_1_10:105218544-105218631:-|nuORF 1.4819007175156935 0.86815623132643 1 {I|L} 1 -1 9.8329 0.0 0.0 0.70396 0.0 0.0 1265.7080183809653 0.0 1265.7080183809653 0.0 7.35863111416478 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.70396 - 19 + 1 2.086 49632.2 1.0 5182 3574 8753 DOHH2_400M_050219_1,8758 DOHH2_400M_050219_1,8758,WRMVRARRAPV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8759 49.796 83.0 415860.0 25 0 28424.0 + 7095 EEMDLFTKY 9 64 588.2689623423673 1174.5233717515346 2 588.2689697146416 MULTI CID FTMS 0 0 0 8753 390041.53125 1.0 0 0.0 6 Unmodified _EEMDLFTKY_ ENSG00000092020|ENST00000261475|PPP2R3C;ENST00000556254.1_1_14:35579616-35591165:-|nuORF;ENST00000557773.5_1_14:35568434-35591165:-|nuORF 20.41453444215458 0.284085796332423 1 EEMD{I|L}{M(Oxidation (M))|F}TKY 9 0 EEM + + 37.167 23.869 6.1339 3.1644 3.1644 50.828 0.0 0.0 0.0 0.0 13.298122174395033 0.0 0.0 0 0.0 0.0 0.0 0.0 + + EEMD{I|L}{M(Oxidation (M))|F}TKY 3.1644 + + 97 + 1 2.086 32879.3 1.0 5183 3574 8753 DOHH2_400M_050219_1,8759 DOHH2_400M_050219_1,8759,EEMDLFTKY False True EEMDLFTKY 49.796168 588.268969714642 2650001.5 8753.0 ENST00000556254.1_1_14:35579616-35591165:-|nuORF;;ENSG00000092020|ENST00000261475|PPP2R3C;;ENST00000557773.5_1_14:35568434-35591165:-|nuORF 8.293421904246012 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8760 49.8 189.0 378290.0 25 0 20414.0 43409 WRCWTWPWREW 11 100 846.3872730690063 1690.7599932048124 2 846.3881713747978 MULTI CID FTMS 0 0 0 8753 333241.84375 0.8615068757428498 -1 0.137847900390625 7 Unmodified _WRCWTWPWREW_ ENST00000374279.3_1_9:114659094-114659565:+|nuORF 1.3295316138638542 0.8688751186870782 1 [HQ]DEAQQW{M(Oxidation (M))|F}YQV{I|L} 13 12 + 113.95 0.0 0.0 6.7397 6.7397 80.184 0.0 0.0 0.0 0.6832761521297925 9.70123389643632 0.6832761521297925 0.6832761521297925 0 1.0682503180159344 0.0 2.5471062485323515 3.703402196076128 [HQ]DEAQQW{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQW{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QQW{M(Oxidation (M))|F}YQV{I|L};[HQ]DEA[AG]QW{M(Oxidation (M))|F}YQV{I|L};[HQ]DEAQQ{[DA]|[EG]}{M(Oxidation (M))|F}YQV{I|L};[HQ]DEAQQW{M(Oxidation (M))|F}Y[AG]V{I|L};[HQ]DEAQ[AG]W{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]QW{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQ{[DA]|[EG]}{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQW{M(Oxidation (M))|F}Y[AG]V{I|L} 6.7397;6.6993;6.2908;6.2031;6.2031;6.2031;6.2031;6.1627;6.1627;6.1627 -;-;-;-;-;-;-;-;-;- 7200 1 2.086 52608.2 1.0 5184 3574 8753 DOHH2_400M_050219_1,8760 DOHH2_400M_050219_1,8760,WRCWTWPWREW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8761 49.804 197.0 257210.0 25 0 25398.0 + + 11452 GEIDGNKVTLDW 12 80 673.833437593692 0 673.8333618044853 PEAK CID FTMS 0 0 0 8753 260644.828125 0.8180001359306883 -1 0.137847900390625 8 Unmodified _GIELQEFPIDW_ ENST00000461347.5_1_2:232319904-232323320:-|nuORF;ENSG00000115053|ENST00000322723|NCL 28.49450938151212 0.2463772716552905 1 D{I|L}ADT{I|L}DR 8 -1 60.603 0.0 0.0 4.5036 0.0 0.0 204.09343195175285 239.10308252506096 443.1965144768138 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.4604093769761874 0.7302046884880937 D{I|L}ADT{I|L}DR 4.5036 - 600 + 1 2.086 44237.6 1.0 5185 3574 8753 DOHH2_400M_050219_1,8761 DOHH2_400M_050219_1,8761,GIELQEFPIDW False False GEIDGNKVTLDW 49.803603 673.833361804485 1972933.125 8753.0 ENST00000461347.5_1_2:232319904-232323320:-|nuORF;;ENSG00000115053|ENST00000322723|NCL 5.27453629175822 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8762 49.808 237.0 372590.0 25 0 44757.0 -1 0 83 670.672982543741 2008.997118231423 3 670.6730224490166 MULTI CID FTMS 0 0 0 8753 205561.578125 0.1984652904132266 -2 0.2538986206054687 9 1 CD[HA]G{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]} 12 -1 49.491 0.0 0.0 2.4635 0.0 0.0 669.3649159162125 0.0 669.3649159162125 0.0 16.062828410967498 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 CD[HA]G{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]} 2.4635 - 494 1 2.086 76065.6 1.0 5186 3574 8753 DOHH2_400M_050219_1,8762 DOHH2_400M_050219_1,8762, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8763 49.811 169.0 474350.0 25 0 46816.0 + 33893 SLFPNSPKW 9 98 538.282064515497 1074.549576097794 2 538.2827026247978 MULTI CID FTMS 0 0 0 8753 181384.90625 0.1013759301833944 -3 0.3520431518554687 10 Unmodified _SLFPNSPKW_ ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF 23.80106514851385 0.2283505500606397 1 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW 9 0 + 73.465 0.0 0.0 6.8368 6.8368 90.426 0.0 0.0 0.0 59.48592905994943 9.53234439706371 9.53234439706371 9.208187539523747 0 0.4247425010840047 2.0 0.3054621874040891 0.0 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]SPKW;{[TV]|[{I|L}S]}W[TA]SPKW;{[TV]|[{I|L}S]}W{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PKW;{[TV]|[{I|L}S]}{[DA]|[EG]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PKW 6.8368;5.9799;5.6998;5.207;4.2047;3.3428 +;-;-;-;-;- + 320 + 1 2.086 64577.3 1.0 5187 3574 8753 DOHH2_400M_050219_1,8763 DOHH2_400M_050219_1,8763,SLFPNSPKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8764 49.817 283.0 283120.0 25 0 32198.0 + 34172 SLMSHAIEL 9 105 500.7599100273444 999.5052671214888 2 500.7606689333916 MULTI CID FTMS 0 0 0 8753 129716.390625 0.5311644427883199 -1 0.137847900390625 11 Unmodified _SLMSHAIEL_ ENSG00000137055|ENST00000397292|PLAA 46.020951573049366 0.0490941689151868 1 {[TV]|[{I|L}S]}[HA]MS{I|L}E{I|L} 9 4 + 52.003 0.0 0.0 5.2028 5.2028 80.374 0.0 0.0 0.0 4.940965235048154 9.889917747712644 4.940965235048154 4.940965235048154 0 1.079689690656103 2.0 0.7614393726401688 0.0 {[TV]|[{I|L}S]}[HA]MS{I|L}E{I|L};[HS]MA{I|L}S{I|L}E{I|L};{[TV]|[{I|L}S]}[HA]{M(Oxidation (M))|F}A{I|L}E{I|L};{[TV]|[{I|L}S]}[HA]SM{I|L}E{I|L};[HA]{M(Oxidation (M))|F}A{I|L}S{I|L}E{I|L};[HA]SM{I|L}S{I|L}E{I|L};[HS]AM{I|L}S{I|L}E{I|L};{[TV]|[{I|L}S]}[HA]MTVE{I|L};[HA]S{I|L}MS{I|L}E{I|L};[HS]A{I|L}MS{I|L}E{I|L} 5.2028;4.7085;4.6585;4.5035;4.3856;4.3856;4.3276;4.1226;3.9082;3.8502 -;-;-;-;-;-;-;-;-;- 410 1 2.086 65751.1 1.0 5188 3574 8753 DOHH2_400M_050219_1,8764 DOHH2_400M_050219_1,8764,SLMSHAIEL True True SLMSHAIEL 49.81657 500.760668933392 884361.5625 8753.0 ENSG00000137055|ENST00000397292|PLAA 5.576377232869466 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8765 49.823 341.0 168670.0 25 0 27762.0 + 24648 MLQIFIRRPIQ 11 93 472.2842351958699 1413.8308761878095 3 472.6184570193291 MULTI CID FTMS 0 0 0 8753 123664.78125 1.0 0 0.0 12 Unmodified _MLQIFIRRPIQ_ REV__ENSG00000186976|ENST00000262726|EFCAB6;REV__ENST00000404038.5_1_22:44079617-44178198:-|nuORF;REV__nc|ENSG00000186976|Q5THR3-2|EFCAB6;REV__nc|ENSG00000186976|Q5THR3-5|EFCAB6;REV__nc|ENSG00000186976|Q5THR3-6|EFCAB6 1.3295316138638542 0.8688751186870782 1 {I|L} 1 -1 10.596 0.0 0.0 0.74945 0.0 0.0 1282.7357966973784 0.0 1282.7357966973784 0.0 1.1988016946252955 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.74945 + + 11 + 1 2.086 58745.8 1.0 5189 3574 8753 DOHH2_400M_050219_1,8765 DOHH2_400M_050219_1,8765,MLQIFIRRPIQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8766 49.837 800.0 205340.0 25 0 20142.0 + 2268 AQFPSSGRFW 10 136 591.788265832381 1181.5619787315618 2 591.7882568240166 MULTI CID FTMS 0 0 0 8753 108261.3984375 0.8555821257236197 -1 0.137847900390625 13 Unmodified _AQFPSSGRFW_ ENSG00000176102|ENST00000323959|CSTF3;ENST00000526480.1_1_11:33157665-33182871:-|nuORF;nc|ENSG00000176102|Q12996-2|CSTF3 41.95555342248728 0.1369168616057562 1 [QA]{M(Oxidation (M))|F}PSSP 7 4 46.656 0.0 0.0 3.9486 0.0 0.0 0.0 464.1931246393188 464.1931246393188 29.092667653881925 0.0 0.0 0.0 0 0.9247425010840048 0.6575773191777937 0.3252574989159953 0.0 [QA]{M(Oxidation (M))|F}PSSP 3.9486 - 471 + 1 2.086 124978.5 0.5799999833106995 5190 3574 8753 DOHH2_400M_050219_1,8766 DOHH2_400M_050219_1,8766,AQFPSSGRFW False True AQFPSSGRFW 49.836568 591.788256824017 2837132.25 8753.0 nc|ENSG00000176102|Q12996-2|CSTF3;;ENSG00000176102|ENST00000323959|CSTF3;;ENST00000526480.1_1_11:33157665-33182871:-|nuORF 8.064681688944498 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8767 49.84 158.0 401200.0 25 0 39622.0 39497 VASAVVVL 8 68 757.4818005454994 756.4745240788993 1 757.4819824099541 MULTI CID FTMS 0 0 0 8753 517927.84375 0.480157457731218 1 -0.0849838256835937 14 Unmodified _VASAVVVL_ ENSG00000278195|ENST00000610913|SSTR3 67.03532852164291 0.116292309877964 1 {[TV]|[{I|L}S]}VGAVV{I|L} 8 4 + 54.863 0.0 0.0 7.2524 7.2524 81.543 0.0 0.0 0.0 0.8737307253439752 14.904630595263413 0.8737307253439752 0.8737307253439752 0 0.5 0.0 2.1549471895720984 0.0 {[TV]|[{I|L}S]}VGAVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VTVV{I|L};{[TV]|[{I|L}S]}GVAVV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAVV{I|L};{[VA]|[{I|L}G]}GVTVV{I|L};{[TV]|[{I|L}S]}GAVVV{I|L};{[TV]|[{I|L}S]}VQVV{I|L};{[TV]|[{I|L}S]}VAGVV{I|L};{[TV]|[{I|L}S]}G{I|L}GVV{I|L};{[TV]|[{I|L}S]}VGVAV{I|L} 7.2524;7.1369;7.1191;6.6698;6.6623;6.5332;6.5326;6.5317;6.3984;6.3064 -;-;-;-;-;-;-;-;-;- 367 1 2.086 50582.0 1.0 5191 3574 8753 DOHH2_400M_050219_1,8767 DOHH2_400M_050219_1,8767,VASAVVVL True True AVGVTVVL 49.839717 757.481982409954 6175836.0 8753.0 ENSG00000111875|ENST00000229595|ASF1A;;ENSG00000105011|ENST00000263382|ASF1B 0.424736092487971 1.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8768 49.854 800.0 155210.0 25 0 7947.2 -1 0 102 898.9230880714217 1795.831623209643 2 899.4220458865166 MULTI CID FTMS 0 0 0 8753 150819.625 1.0 0 0.0 15 1 QDAN{I|L}NP[C(Carbamidomethyl (C))M] 9 -1 68.862 0.0 0.0 3.8345 0.0 0.0 734.3662045027523 0.0 734.3662045027523 0.0 49.2919951248829 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.7742275032520141 QDAN{I|L}NP[C(Carbamidomethyl (C))M] 3.8345 - 1399 1 2.086 86496.5 0.7099999785423279 5192 3574 8753 DOHH2_400M_050219_1,8768 DOHH2_400M_050219_1,8768, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8769 49.865 558.0 162630.0 25 0 22390.0 + 21510 LPIFKMLHY 9 133 581.3276538391469 1160.6407547450938 2 581.3271362185478 MULTI CID FTMS 0 0 0 8753 129125.484375 0.6434578629337114 -1 0.137847900390625 16 Unmodified _LPIFKMLHY_ REV__ENSG00000103194|ENST00000219473|USP10;REV__ENST00000547785.2_1_14:20147170-20147386:+|nuORF;REV__nc|ENSG00000103194|Q14694-2|USP10;REV__nc|ENSG00000103194|Q14694-3|USP10 5.230669730166228 0.7320841359114558 1 W 1 -1 13.495 0.0 0.0 1.1627 0.0 0.0 956.5505122907954 0.0 956.5505122907954 0.0 2.235790156711097 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1627 - 67 + 1 2.086 74475.7 1.0 5193 3574 8753 DOHH2_400M_050219_1,8769 DOHH2_400M_050219_1,8769,LPIFKMLHY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8771 49.87 25.0 1516700.0 25 0 87106.0 -1 0 51 881.9072348646716 1761.7999167961432 2 881.9063598513603 MULTI CID FTMS 0 0 0 8770 2178244.25 0.4979760845111025 1 -0.1167106628417968 1 1 AEQQDA{M(Oxidation (M))|F}YQV{I|L} 11 -1 70.905 0.0 0.0 4.0246 0.0 0.0 451.18105899436506 0.0 451.18105899436506 0.0 46.72345179153194 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.4247425010840047 AEQQDA{M(Oxidation (M))|F}YQV{I|L} 4.0246 - 951 1 2.093 32467.0 1.0 5194 3575 8770 DOHH2_400M_050219_1,8771 DOHH2_400M_050219_1,8771, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8772 49.875 284.0 290840.0 25 0 54238.0 + 8482 ETDEKDFYLYY 11 96 743.3248857893019 1484.6352186454037 2 743.3248168826103 MULTI CID FTMS 0 0 0 8770 200309.578125 0.1777426394340636 2 -0.2862052917480469 2 Unmodified _ETDEKDFYLYY_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 34.93206674587334 0.2904649469012649 1 {M(Oxidation (M))|F}Y{I|L}YY 5 6 24.565 0.0 0.0 1.6546 0.0 0.0 717.2783070294937 0.0 717.2783070294937 0.0 1.096981436199016 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + {M(Oxidation (M))|F}Y{I|L}YY 1.6546 + + 100 1 2.093 71084.2 1.0 5195 3575 8770 DOHH2_400M_050219_1,8772 DOHH2_400M_050219_1,8772,ETDEKDFYLYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8773 49.877 81.0 912870.0 25 0 117520.0 + 29087 QEMPWNVRM 9 80 595.7758711356267 1189.5371893380534 2 595.7762328982353 MULTI CID FTMS 0 0 0 8770 621679.875 0.7869963847726081 -1 0.0849838256835937 3 Unmodified _QEMPWNVRM_ chr3:112128228-112130445|42|16.38|0.48|5.1|-|ENST00000495418|GCSAM,GCSAM;chr3:112130519-112133092|43|17.12|0.46|5.23|-|ENST00000484193|GCSAM,GCSAM;ENSG00000174500|ENST00000308910|GCSAM;nc|ENSG00000174500|Q8N6F7-2|GCSAM;nc|ENSG00000174500|Q8N6F7-3|GCSAM 72.96794272382148 0.0199516581995792 1 QEMPWNVRM 9 0 + 85.293 0.0 0.0 7.1703 7.1703 91.175 0.0 0.0 0.0 60.22136139036361 11.439389643433628 11.439389643433628 9.208187539523747 0 1.4124379954164592 1.5228787452803376 0.0 1.0356668758921828 + + QEMPWNVRM;QEMP{[DA]|[EG]}NVRM;QEMPWGGVRM;QEMP{[DA]|[EG]}GGVRM;{[WS]|[C(Carbamidomethyl (C)){I|L}]}DPWNVRM;[AG]EM{I|L}[WP]QQM;{[WS]|[C(Carbamidomethyl (C)){I|L}]}DPWGGVRM;{[WS]|[C(Carbamidomethyl (C)){I|L}]}DP{[DA]|[EG]}NVRM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}M{I|L}[WP]QQM;{[WS]|[C(Carbamidomethyl (C)){I|L}]}DP{[DA]|[EG]}GGVRM 7.1703;6.3962;6.3962;5.6258;4.0303;3.6887;3.2562;3.2562;2.9756;2.4858 +;-;-;-;-;-;-;-;-;- + 256 + 1 2.093 58058.6 1.0 5196 3575 8770 DOHH2_400M_050219_1,8773 DOHH2_400M_050219_1,8773,QEMPWNVRM True True QEMPWNVRM 49.876736 595.776232898235 8743112.0 8770.0 chr3:112128228-112130445|42|16.38|0.48|5.1|-|ENST00000495418|GCSAM,GCSAM;;nc|ENSG00000174500|Q8N6F7-3|GCSAM;;ENSG00000174500|ENST00000308910|GCSAM;;nc|ENSG00000174500|Q8N6F7-2|GCSAM;;chr3:112130519-112133092|43|17.12|0.46|5.23|-|ENST00000484193|GCSAM,GCSAM 8.681652386983236 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8774 49.881 234.0 188600.0 25 0 49205.0 30225 QWRKLLKMAQL 11 69 707.9224120664453 1413.8302711996903 2 707.9221679568291 MULTI CID FTMS 0 0 0 8770 399652.1875 1.0 0 0.0 4 Unmodified _QWRKLLKMAQL_ ENST00000494558.5_1_3:150276231-150281349:+|nuORF 0.3506318815782774 0.8734936314171269 1 Y 1 11 6.9897 0.0 0.0 0.49438 0.0 0.0 543.4070056741031 704.3538302057249 1247.760835879828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.49438 - 5 + 1 2.093 45778.1 1.0 5197 3575 8770 DOHH2_400M_050219_1,8774 DOHH2_400M_050219_1,8774,QWRKLLKMAQL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8775 49.884 134.0 703340.0 25 0 71423.0 + 10433 FTDVNSILRY 10 85 614.322030695783 1226.629508458366 2 614.3224365115166 MULTI CID FTMS 0 0 0 8770 359277.65625 0.3243412030236565 -1 0.0849838256835937 5 Unmodified _FTDVNSILRY_ ENSG00000136628|ENST00000366923|EPRS1 83.42873516780209 0.014257832770272 1 {M(Oxidation (M))|F}TDVNS{I|L}{I|L}RY 10 0 + 88.045 0.0 0.0 7.1778 7.1778 90.133 0.0 0.0 0.0 72.77291508170183 11.197887582883936 11.197887582883936 9.164539485499247 0 0.9247425010840048 0.0 0.7614393726401688 1.110924374808178 + + {M(Oxidation (M))|F}TDVNS{I|L}{I|L}RY;{M(Oxidation (M))|F}TDVGGS{I|L}{I|L}RY;{M(Oxidation (M))|F}[WE][WK]{I|L}RY 7.1778;6.4307;2.3856 +;-;- + 196 + 1 2.093 74781.2 1.0 5198 3575 8770 DOHH2_400M_050219_1,8775 DOHH2_400M_050219_1,8775,FTDVNSILRY True True FTDVNSILRY 49.883857 614.322436511517 11981876.0 8770.0 ENSG00000136628|ENST00000366923|EPRS1 9.236023585001629 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8776 49.887 174.0 479550.0 25 0 91335.0 + 24466 MIDPTLLHY 9 84 551.7828110353494 1101.5510691374986 2 551.7835571169853 MULTI CID FTMS 0 0 0 8770 299573.84375 0.526530219251492 -1 0.0849838256835937 6 Unmodified _MIDPTLLHY_ ENSG00000163618|ENST00000383710|CADPS;nc|ENSG00000163618|Q9ULU8-2|CADPS;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS 63.562846038646086 0.0241094678104353 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DPT{I|L}{I|L}HY 9 0 + 76.393 0.0 0.0 6.935 6.935 82.692 0.0 0.0 0.0 27.147642715192504 2.218487496163561 2.218487496163561 2.218487496163561 0 0.8494850021680094 2.0 0.805462187404089 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DPT{I|L}{I|L}HY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DPT{I|L}{I|L}NW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DPT{I|L}{I|L}YH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DPT{I|L}{I|L}GGW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[KC][RH]{[TV]|[{I|L}S]};[TP]{I|L}D{I|L}HYP{M(Oxidation (M))|F};[TP]D{I|L}{I|L}HYP{M(Oxidation (M))|F};[TP]{I|L}{I|L}S[KC]D[EP];[TP]{I|L}{I|L}HDYP{M(Oxidation (M))|F};[YV]DRH{I|L}HY 6.935;6.7336;6.5019;5.8977;2.6228;2.3928;2.1659;2.0983;2.0756;1.9536 +;-;-;-;-;-;-;-;-;- + 353 + 1 2.093 66483.3 1.0 5199 3575 8770 DOHH2_400M_050219_1,8776 DOHH2_400M_050219_1,8776,MIDPTLLHY True True MIDPTLLHY 49.887263 551.783557116985 3224527.25 8770.0 nc|ENSG00000163618|Q9ULU8-3|CADPS;;nc|ENSG00000163618|Q9ULU8-4|CADPS;;ENSG00000163618|ENST00000383710|CADPS;;nc|ENSG00000163618|Q9ULU8-2|CADPS 7.94238265355428 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8777 49.901 800.0 282640.0 25 0 35803.0 -1 0 94 1005.5067380528536 2008.998923172507 2 1006.008593738079 MULTI CID FTMS 0 0 0 8770 192353.25 0.7673643769150047 -1 0.0849838256835937 7 1 H{I|L}[NP]{I|L}NEEQ 9 -1 82.362 0.0 0.0 4.0996 0.0 0.0 0.0 931.4684542291624 931.4684542291624 43.76795939188454 0.0 0.0 0.0 0 2.7302046884880937 1.6989700043360187 0.0 0.4247425010840047 H{I|L}[NP]{I|L}NEEQ 4.0996 - 2468 + 1 2.093 149468.8 0.699999988079071 5200 3575 8770 DOHH2_400M_050219_1,8777 DOHH2_400M_050219_1,8777, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8778 49.911 556.0 116520.0 25 0 24472.0 + 43404 WQTKIERWLLL 11 98 495.9588328396534 1484.8546691191602 3 495.9590637087822 MULTI CID FTMS 0 0 0 8770 132910.328125 0.7070028536904732 -1 0.0849838256835937 8 Unmodified _WQTKIERWLLL_ REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF 1.4551175022131473 0.8682825962816412 1 {I|L} 1 -1 11.783 0.0 0.0 0.79353 0.0 0.0 1353.759620146307 0.0 1353.759620146307 0.0 -0.2069634257911268 -0.2069634257911268 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.79353 + + 31 + 1 2.093 66679.3 1.0 5201 3575 8770 DOHH2_400M_050219_1,8778 DOHH2_400M_050219_1,8778,WQTKIERWLLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8779 49.925 800.0 182390.0 25 0 11058.0 -1 0 133 965.9578946218122 1929.9012363104243 2 966.4607421755792 MULTI CID FTMS 0 0 0 8770 133135.234375 0.5256911489731826 -1 0.0849838256835937 9 1 [NP]{I|L}N{M(Oxidation (M))|F}NA{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}YQSN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 16 -1 + 73.851 0.0 0.0 3.8267 3.8267 69.791 0.0 0.0 0.0 4.40691362661326 0.3076113046245723 0.3076113046245723 0.3076113046245723 0 1.0 0.8538719643217619 0.3807196863200844 1.1307196863200843 [NP]{I|L}N{M(Oxidation (M))|F}NA{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}YQSN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}NAD[MT]R{M(Oxidation (M))|F}AN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[MT]TWSN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[MT]R{M(Oxidation (M))|F}AN{I|L}DV[HC];[NP]{I|L}NAD[MT]R{M(Oxidation (M))|F}AN[NP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[MT]TWSN[NP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[RD]R{M(Oxidation (M))|F}YQSN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NA{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}YQSN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[RD]R{M(Oxidation (M))|F}A[YG]SN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[RD]TWS[YG]SN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.8267;3.8107;3.8078;3.6918;3.6825;3.6796;3.6254;3.5983;3.5725;3.5696 -;-;-;-;-;-;-;-;-;- 11453 1 2.093 98092.4 0.5799999833106995 5202 3575 8770 DOHH2_400M_050219_1,8779 DOHH2_400M_050219_1,8779, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8780 49.939 800.0 508900.0 25 0 27505.0 + 13791 HTDDPLTWDY 10 169 631.7696856833676 1261.524818433535 2 631.7700073122978 MULTI CID FTMS 0 0 0 8770 127492.6171875 0.0127974530878428 -3 0.3388824462890625 10 Unmodified _HTDDPLTWDY_ ENSG00000108651|ENST00000261708|UTP6;ENST00000583408.5_1_17:30207568-30228646:-|nuORF 111.28704002717404 0.0018568690458455 1 [HT]DDP{I|L}TWDY 10 0 + 89.535 0.0 0.0 7.0974 7.0974 93.378 0.0 0.0 0.0 8.361431973613307 62.82689968726976 8.361431973613307 13.61519008172914 0 1.2134679910804405 0.4559319556497244 2.646591250700361 0.0 + + [HT]DDP{I|L}TWDY;[HS]EDP{I|L}TWDY;[WD]TY{I|L}TWDY;{[WT]|[RM]}DY{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TWDY;[HT]DDP{I|L}G{[ET]|[MV]}DY;{[WT]|[RM]}DY{I|L}TEGDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TEGDY;{[YD]|[{M(Oxidation (M))|F}M]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RTWDY;[HT]DE[VP]TWDY 7.0974;6.0181;5.7014;5.6024;5.485;5.4302;5.1247;5.0074;4.93;4.8696 +;-;-;-;-;-;-;-;-;- + 3390 1 2.093 294964.2 0.6000000238418579 5203 3575 8770 DOHH2_400M_050219_1,8780 DOHH2_400M_050219_1,8780,HTDDPLTWDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8781 49.952 800.0 250750.0 25 0 19382.0 + 563 AEIIKGELW 9 168 529.7982725252778 0 529.7983276247978 PEAK CID FTMS 0 0 0 8770 112647.5859375 0.4561501873270087 -1 0.0849838256835937 11 Unmodified _AEIIKGELW_ ENSG00000187189|ENST00000420283|TSPYL4 61.60191391372663 0.0152064990424181 1 {I|L}{I|L}[WK]MT 6 6 33.636 0.0 0.0 3.1804 0.0 0.0 200.0816941815221 82.0669191949828 282.1486133765049 0.0 0.0 0.0 0.0 0 1.7302046884880935 0.0 1.1719556608900552 0.0 {I|L}{I|L}[WK]MT 3.1804 - 1408 + 1 2.093 151962.0 0.5199999809265137 5204 3575 8770 DOHH2_400M_050219_1,8781 DOHH2_400M_050219_1,8781,AEIIKGELW True True AEIIKGELW 49.952405 529.798327624798 1533476.5 8770.0 ENSG00000187189|ENST00000420283|TSPYL4 5.085010687510173 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8782 49.968 800.0 175570.0 25 0 15408.0 + 22924 LSDSFSDLY 9 178 523.7369332299459 1045.4593135266916 2 523.7372314333916 MULTI CID FTMS 0 0 0 8770 178835.5 1.0 0 0.0 12 Unmodified _LSDSFSDLY_ ENSG00000058804|ENST00000371429|NDC1;nc|ENSG00000058804|Q9BTX1-2|NDC1;nc|ENSG00000058804|Q9BTX1-3|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1 60.38955033654506 0.025866396858536 1 {NN|[MP]|[D{I|L}]|[EV]}SC{I|L}[YG]{I|L}Y 9 5 + 37.272 0.0 0.0 3.5651 3.5651 68.811 0.0 0.0 0.0 3.273589343863307 4.443762574181157 3.273589343863307 0.2152998730866144 0 0.718765315847925 1.3979400086720375 0.7742275032520141 0.0 {NN|[MP]|[D{I|L}]|[EV]}SC{I|L}[YG]{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}SS[WY]{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSS{NN|[MP]|[D{I|L}]|[EV]}{I|L}Y;{[TV]|[{I|L}S]}DC{I|L}{[DS]|[MA]|[CV]|TT}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{NN|[MP]|[D{I|L}]|[EV]}CS{I|L}[YG]{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}SC{I|L}{[DS]|[MA]|[CV]|TT}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}S{NN|[MP]|[D{I|L}]|[EV]}{I|L}Y;{[C(Carbamidomethyl (C))E]|[WC]}{I|L}[WY]{I|L}Y;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}SS{NN|[MP]|[D{I|L}]|[EV]}{I|L}Y;{[TV]|[{I|L}S]}S{M(Oxidation (M))|F}SDD{I|L}Y 3.5651;3.5445;3.252;2.9927;2.6549;2.5475;2.4697;2.3361;2.2717;2.2618 -;-;-;-;-;-;-;-;-;- 1028 1 2.093 109261.6 0.6299999952316284 5205 3575 8770 DOHH2_400M_050219_1,8782 DOHH2_400M_050219_1,8782,LSDSFSDLY True True LSDSFSDLY 49.967719 523.737231433392 705979.5 8770.0 nc|ENSG00000058804|Q9BTX1-2|NDC1;;nc|ENSG00000058804|Q9BTX1-4|NDC1;;nc|ENSG00000058804|Q9BTX1-3|NDC1;;nc|ENSG00000058804|Q9BTX1-5|NDC1;;ENSG00000058804|ENST00000371429|NDC1 2.993836283683777 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8783 49.982 800.0 77982.0 25 0 7319.8 -1 0 82 724.0745142681044 2169.201713404513 3 724.0753051638603 MULTI CID FTMS 0 0 0 8770 140568.03125 1.0 0 0.0 13 1 [KA]VGY{I|L}DEVAD 11 -1 68.625 0.0 0.0 3.1636 0.0 0.0 0.0 1005.6244894598608 1005.6244894598608 52.42691271126782 0.0 0.0 0.0 0 1.5 0.0 0.0 0.6694451763165201 [KA]VGY{I|L}DEVAD 3.1636 - 447 1 2.093 56753.5 0.5799999833106995 5206 3575 8770 DOHH2_400M_050219_1,8783 DOHH2_400M_050219_1,8783, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8785 49.99 328.0 183370.0 25 0 17428.0 + 6913 EEFGRFASF 9 95 545.2535201008483 1088.4924872684965 2 545.2539550662041 MULTI CID FTMS 0 0 0 8784 93753.8671875 0.0653590063522848 2 -0.358306884765625 1 Unmodified _EEFGRFASF_ ENSG00000204287|ENST00000395388|HLA-DRA 32.30548876998284 0.1201446275138228 1 EE[WR]{M(Oxidation (M))|F}AS 7 3 34.001 0.0 0.0 3.1237 0.0 0.0 0.0 180.06607060273396 180.06607060273396 13.15532392150404 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3807196863200844 0.0 EE[WR]{M(Oxidation (M))|F}AS 3.1237 - 166 1 2.093 49086.1 1.0 5207 3576 8784 DOHH2_400M_050219_1,8785 DOHH2_400M_050219_1,8785,EEFGRFASF True True EEFGRFASF 49.99005 545.253955066204 17307184.0 8784.0 ENSG00000204287|ENST00000395388|HLA-DRA 7.974900881449382 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8786 49.992 62.0 993450.0 25 0 86906.0 -1 YQRCKWEYQMI 11 62 782.3578410925245 1562.701129251849 2 782.3581420779228 MULTI CID FTMS 0 0 0 8784 876845.375 0.7191134195505815 -1 0.1167106628417968 2 Oxidation (M) _YQRCKWEYQM(Oxidation (M))I_ ENST00000527531.5_1_11:108253785-108256679:-|nuORF 2.735195868890462 0.8622431031272658 1 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QDA{M(Oxidation (M))|F}YQV{I|L} 13 -1 + 96.522 0.0 0.0 6.1766 6.1766 60.95 0.0 0.0 0.0 0.4575749056067479 16.615103821334543 0.4575749056067479 0.0 0 1.2302046884880935 1.3979400086720375 0.7742275032520141 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QDA{M(Oxidation (M))|F}YKV{I|L};[HD]EAQQDA{M(Oxidation (M))|F}YKV{I|L};[HD]EAQQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QW{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QDA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]DA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]DA{M(Oxidation (M))|F}YQV{I|L} 6.1766;6.1766;6.1473;6.1473;5.78;5.78;5.7516;5.5961;5.5961;5.5961 -;-;-;-;-;-;-;-;-;- 1180 1 2.093 50439.5 1.0 5208 3576 8784 DOHH2_400M_050219_1,8786 DOHH2_400M_050219_1,8786,YQRCKWEYQMI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8787 49.994 112.0 512000.0 25 0 123080.0 19430 LEVRRRKY 8 65 560.3403480662034 1118.6661431992068 2 560.3406249880791 MULTI CID FTMS 0 0 0 8784 524494.0625 0.3542630502157516 -1 0.1167106628417968 3 Unmodified _LEVRRRKY_ ENSG00000277161|ENST00000614443|PIGW 2.577480529830294 0.808687252328423 1 Y 1 7 11.259 0.0 0.0 1.0065 0.0 0.0 937.59166307401 0.0 937.59166307401 0.0 0.7745097999287154 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.0065 + + 3 + 1 2.093 49685.1 1.0 5209 3576 8784 DOHH2_400M_050219_1,8787 DOHH2_400M_050219_1,8787,LEVRRRKY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8788 49.998 212.0 315280.0 25 0 39871.0 + 17479 KPFEKFLL 8 99 511.30645193444303 0 511.3081237673759 PEAK CID FTMS 0 0 0 8784 292544.75 1.0 0 0.0 4 Unmodified _KPFEKFLL_ ENSG00000136051|ENST00000332180|WASHC4;ENST00000311317.8_1_12:105501518-105541426:+|nuORF;nc|ENSG00000136051|Q2M389-2|WASHC4 55.50274090549119 0.0762197263278746 1 {I|L}K{M(Oxidation (M))|F}KE 5 6 36.54 0.0 0.0 3.5802 0.0 0.0 131.09377674330204 241.09876428775627 372.1925410310584 0.0 0.0 0.0 0.0 0 0.9489700043360187 0.0 1.0138793319624575 0.0 {I|L}K{M(Oxidation (M))|F}KE 3.5802 - 410 + 1 2.093 53909.5 1.0 5210 3576 8784 DOHH2_400M_050219_1,8788 DOHH2_400M_050219_1,8788,KPFEKFLL True True KPFEKFLL 49.997985 511.308123767376 935547.0625 8784.0 ENSG00000136051|ENST00000332180|WASHC4;;nc|ENSG00000136051|Q2M389-2|WASHC4;;ENST00000311317.8_1_12:105501518-105541426:+|nuORF 1.4910169492165248 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8789 50.003 255.0 323370.0 25 0 71075.0 + 17392 KMKIKLGRY 9 82 568.8534680002683 1135.6923830673366 2 568.8537475466728 MULTI CID FTMS 0 0 0 8784 277733.09375 0.2798525042183531 -1 0.1167106628417968 5 Unmodified _KMKIKLGRY_ REV__ENST00000506351.6_1_5:72171559-72173100:+|nuORF 0.6014990680409731 0.8936861360942873 1 W 1 -1 11.783 0.0 0.0 1.0375 0.0 0.0 931.6023847536632 0.0 931.6023847536632 0.0 0.3627533357430579 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.0375 - 17 + 1 2.093 67751.4 1.0 5211 3576 8784 DOHH2_400M_050219_1,8789 DOHH2_400M_050219_1,8789,KMKIKLGRY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8790 50.006 177.0 442900.0 25 0 51586.0 + + 11103 GEFKALQEW 9 107 554.2769653139412 1106.5393776946823 2 554.2771484255791 MULTI CID FTMS 0 0 0 8784 272626.375 0.2600575653178201 -1 0.1167106628417968 6 Unmodified _GEFQLLTNW_ nc|ENSG00000181222|P24928|POLR2A;ENSG00000181222|ENST00000674977|POLR2A 60.07390631473393 0.0260411565414776 1 {[DA]|[EG]}{M(Oxidation (M))|F}GA{I|L}[KA]EW 10 -1 + 75.53 0.0 0.0 6.8258 6.8258 84.327 0.0 0.0 0.0 9.489700043360187 9.489700043360187 9.489700043360187 3.521825181113627 0 0.75 1.2218487496163564 1.91944517631652 0.3252574989159953 {[DA]|[EG]}{M(Oxidation (M))|F}GA{I|L}[KA]EW;{[DA]|[EG]}{M(Oxidation (M))|F}Q{I|L}[KA]EW;{[DA]|[EG]}{M(Oxidation (M))|F}[KA]{I|L}AGEW;W{M(Oxidation (M))|F}GARREW;{[DA]|[EG]}{M(Oxidation (M))|F}[KA]{I|L}QEW;W{M(Oxidation (M))|F}QRREW;{[DA]|[EG]}{M(Oxidation (M))|F}RRAWW;{[DA]|[EG]}{M(Oxidation (M))|F}[KA]{I|L}AW{[DA]|[EG]};{[CT]|[{M(Oxidation (M))|F}G]}E[KA]{I|L}AGEW;{[DA]|[EG]}A[{I|L}A]K{M(Oxidation (M))|F}GEW 6.8258;6.5075;5.9682;5.8963;5.6499;5.5891;4.8215;4.6468;4.596;4.3123 -;-;-;-;-;-;-;-;-;- 1237 + 1 2.093 64284.4 1.0 5212 3576 8784 DOHH2_400M_050219_1,8790 DOHH2_400M_050219_1,8790,GEFQLLTNW False False GEFKALQEW 50.006185 554.277148425579 6183547.0 8784.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A 5.317097822825114 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8791 50.013 363.0 370220.0 25 0 52055.0 + 24342 MELPDYRQW 9 89 619.2882200109789 1236.5618870887577 2 619.2879516482353 MULTI CID FTMS 0 0 0 8784 224391.84375 1.0 0 0.0 7 Unmodified _MELPDYRQW_ ENSG00000119013|ENST00000237889|NDUFB3 38.17557092003332 0.0854718145212029 1 ME{I|L}PDW 6 3 66.146 0.0 0.0 5.3492 0.0 0.0 0.0 462.2111910455688 462.2111910455688 49.94850021680094 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 ME{I|L}PDW 5.3492 - 292 + 1 2.093 102521.9 1.0 5213 3576 8784 DOHH2_400M_050219_1,8791 DOHH2_400M_050219_1,8791,MELPDYRQW True True MELPDYRQW 50.01274 619.287951648235 869597.0 8784.0 ENSG00000119013|ENST00000237889|NDUFB3 6.830647309621175 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8792 50.021 441.0 169460.0 25 0 24909.0 + + 16134 TIDKATGILLY 11 94 604.3504718313886 1206.6863907295772 2 604.3510619997978 MULTI CID FTMS 0 0 0 8784 199385.75 0.8746618836116735 1 -0.16949462890625 8 Unmodified _ITTNGVLTLLY_ nc|ENSG00000172053|P47897-2|QARS1;ENST00000479495.5_1_3:49140063-49142467:-|nuORF;ENST00000482438.2_1_3:49141637-49142166:-|nuORF;ENSG00000172053|ENST00000306125|QARS1 38.61474834105838 0.2337350513322792 1 [{I|L}T]QKD{I|L}T{I|L}{I|L}Y 10 -1 + 76.432 0.0 0.0 6.334 6.334 82.342 0.0 0.0 0.0 20.79181246047625 61.827665712010216 20.79181246047625 3.0102999566398125 0 1.1989700043360187 2.0 1.079689690656103 0.0 [{I|L}T]QKD{I|L}T{I|L}{I|L}Y;[{I|L}T]QKDT{I|L}{I|L}{I|L}Y;[{I|L}T]QK{I|L}DT{I|L}{I|L}Y;[{I|L}T]QKD{I|L}{I|L}T{I|L}Y;[{I|L}T][AG]KD{I|L}T{I|L}{I|L}Y;[{I|L}T]D[KA]G{I|L}T{I|L}{I|L}Y;[{I|L}T]Q[VS]G{I|L}T{I|L}{I|L}Y;[{I|L}T][AG]KDT{I|L}{I|L}{I|L}Y;[{I|L}T]QK{I|L}D{I|L}T{I|L}Y;[{I|L}T]QK{I|L}SE{I|L}{I|L}Y 6.334;6.0846;5.8573;5.769;5.5745;5.471;5.3251;5.3251;5.2923;5.278 -;-;-;-;-;-;-;-;-;- 856 1 2.093 59252.6 1.0 5214 3576 8784 DOHH2_400M_050219_1,8792 DOHH2_400M_050219_1,8792,ITTNGVLTLLY False False TIDKATGILLY 50.020592 604.351061999798 1574200.5 8784.0 nc|ENSG00000172053|P47897-2|QARS1;;ENST00000479495.5_1_3:49140063-49142467:-|nuORF;;ENST00000482438.2_1_3:49141637-49142166:-|nuORF;;ENSG00000172053|ENST00000306125|QARS1 6.053913593292236 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8793 50.026 293.0 206420.0 25 0 20265.0 + 7273 EETPNILRI 9 103 542.8033201725764 0 542.8036376833916 PEAK CID FTMS 0 0 0 8784 190513.71875 1.0 0 0.0 9 Unmodified _EETPNILRI_ ENSG00000156675|ENST00000330843|RAB11FIP1;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;ENST00000523182.5_1_8:37720415-37730726:-|nuORF;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1 43.85829265575387 0.0484669621479465 1 TPN{I|L}{I|L} 5 4 39.508 0.0 0.0 3.646 0.0 0.0 258.0836129571998 284.1724032037719 542.2560161609717 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.7742275032520141 + TPN{I|L}{I|L} 3.646 + + 61 + 1 2.093 54025.5 1.0 5215 3576 8784 DOHH2_400M_050219_1,8793 DOHH2_400M_050219_1,8793,EETPNILRI True True EETPNILRI 50.025988 542.803637683392 694923.4375 8784.0 nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;;ENST00000523182.5_1_8:37720415-37730726:-|nuORF;;ENSG00000156675|ENST00000330843|RAB11FIP1 6.49021561940511 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8794 50.032 344.0 198350.0 25 0 20577.0 + 22765 LQPLGSLIL 9 116 477.306531881459 952.598510829718 2 477.3054687380791 MULTI CID FTMS 0 0 0 8784 179004.875 1.0 0 0.0 10 Unmodified _LQPLGSLIL_ REV__ENSG00000102034|ENST00000308167|ELF4 16.942295170755138 0.3780752226737986 1 {I|L} 1 -1 15.485 0.0 0.0 1.6255 0.0 0.0 821.5035991859666 0.0 821.5035991859666 0.0 6.611096473669598 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.6255 + + 181 + 1 2.093 57141.5 1.0 5216 3576 8784 DOHH2_400M_050219_1,8794 DOHH2_400M_050219_1,8794,LQPLGSLIL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8795 50.037 235.0 326810.0 25 0 36385.0 + 29626 QMEPAAFQALY 11 83 642.8009104875671 1283.587268041934 2 642.8005859255791 MULTI CID FTMS 0 0 0 8784 177451.8125 0.976787430148474 -1 0.1167106628417968 11 Oxidation (M) _QM(Oxidation (M))EPAAFQALY_ nc|ENSG00000215845|Q8NFU3-3|TSTD1;nc|ENSG00000215845|Q8NFU3-2|TSTD1;ENSG00000215845|ENST00000423014|TSTD1;nc|ENSG00000215845|Q8NFU3-4|TSTD1 40.23920728925047 0.2087110615831976 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[QA]{M(Oxidation (M))|F}A[C(Carbamidomethyl (C))H]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 10 8 + 37.222 0.0 0.0 2.8999 2.8999 72.735 0.0 0.0 0.0 2.3721186938815464 2.3721186938815464 2.3721186938815464 4.361818737241734 0 0.4247425010840047 0.0 0.6307196863200843 1.274227503252014 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[QA]{M(Oxidation (M))|F}A[C(Carbamidomethyl (C))H]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[C(Carbamidomethyl (C))H]{M(Oxidation (M))|F}[QA]{I|L}Y;{[MS]|[{M(Oxidation (M))|F}A]}G[C(Carbamidomethyl (C))H]A{M(Oxidation (M))|F}[QA]{I|L}Y;{[MS]|[{M(Oxidation (M))|F}A]}GA[C(Carbamidomethyl (C))H]{M(Oxidation (M))|F}[QA]{I|L}Y;{[MS]|[{M(Oxidation (M))|F}A]}Q[C(Carbamidomethyl (C))H]{M(Oxidation (M))|F}[QA]{I|L}Y;[QA]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H]{M(Oxidation (M))|F}[QA]{I|L}Y 2.8999;2.5601;2.5124;2.5089;2.2689;1.7193 -;-;-;-;-;- 155 + 1 2.093 66447.9 1.0 5217 3576 8784 DOHH2_400M_050219_1,8795 DOHH2_400M_050219_1,8795,QMEPAAFQALY False False QMEPAAFQALY 50.036612 642.800585925579 1821224.125 8784.0 nc|ENSG00000215845|Q8NFU3-3|TSTD1;;nc|ENSG00000215845|Q8NFU3-2|TSTD1;;ENSG00000215845|ENST00000423014|TSTD1;;nc|ENSG00000215845|Q8NFU3-4|TSTD1 0.1454184055328369 2.0 True 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8796 50.052 800.0 250050.0 25 0 12161.0 -1 0 143 887.9045211554636 0 887.9059936404228 PEAK CID FTMS 0 0 0 8784 142620.421875 0.7009647406028505 -1 0.1167106628417968 12 1 VQY{M(Oxidation (M))|F}ADQQAED 11 -1 110.87 0.0 0.0 6.2505 0.0 0.0 131.09022143378212 345.1316927545532 476.2219141883353 0.0 0.0 0.0 0.0 0 1.363982988912431 0.0 1.2614393726401687 2.416386562212267 VQY{M(Oxidation (M))|F}ADQQAED 6.2505 - 11205 + 1 2.093 139555.3 0.6299999952316284 5218 3576 8784 DOHH2_400M_050219_1,8796 DOHH2_400M_050219_1,8796, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8797 50.065 800.0 142470.0 25 0 16731.0 + 10543 FVDSNLLY 8 146 485.74784492169806 969.481136910196 2 485.7473022341728 MULTI CID FTMS 0 0 0 8784 135905.4375 1.0 0 0.0 13 Unmodified _FVDSNLLY_ ENSG00000155792|ENST00000286234|DEPTOR;nc|ENSG00000155792|Q8TB45-2|DEPTOR 44.40701690623563 0.1655546087385432 1 [{M(Oxidation (M))|F}V]DSN{I|L}{I|L}Y 8 0 + 32.585 0.0 0.0 3.3611 3.3611 77.528 0.0 0.0 0.0 3.05507416990444 15.595172808031208 3.05507416990444 9.018637558036673 0 0.7429928190999391 0.0 0.4247425010840047 0.3494850021680094 + + [{M(Oxidation (M))|F}V]DSN{I|L}{I|L}Y;[{M(Oxidation (M))|F}V]DSQV{I|L}Y;[{M(Oxidation (M))|F}V]DSGG{I|L}{I|L}Y;[{M(Oxidation (M))|F}V]D[WK]{I|L}Y;{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[CS]{I|L}Y;{I|L}{I|L}[CS]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}Y;[{M(Oxidation (M))|F}V]DS[AG]V{I|L}Y;{I|L}{I|L}[VS][C(Carbamidomethyl (C))C]{I|L}Y 3.3611;2.4308;2.0452;1.5099;1.4501;1.1396;1.115;0.65023 +;-;-;-;-;-;-;- + 206 1 2.093 93862.1 0.5299999713897705 5219 3576 8784 DOHH2_400M_050219_1,8797 DOHH2_400M_050219_1,8797,FVDSNLLY False True FVDSNLLY 50.06545 485.747302234173 621973.5625 8784.0 ENSG00000155792|ENST00000286234|DEPTOR;;nc|ENSG00000155792|Q8TB45-2|DEPTOR 3.554498672485352 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8798 50.079 800.0 232930.0 25 0 28491.0 -1 VLRPLRPCRRY 11 134 743.4354041234914 1484.8562553137826 2 743.4361450076103 MULTI CID FTMS 0 0 0 8784 118129.859375 0.785216171713481 1 -0.16949462890625 14 Carbamidomethyl (C) _VLRPLRPC(Carbamidomethyl (C))RRY_ ENSG00000132305|ENST00000410111|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000486633.1_1_2:86400704-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT 3.5964929083625545 0.858179447565866 1 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}DY 6 -1 30.507 0.0 0.0 2.0545 0.0 0.0 0.0 757.4842670770033 757.4842670770033 11.85109347721447 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.3807196863200844 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}DY 2.0545 - 773 1 2.093 141781.5 0.5699999928474426 5220 3576 8784 DOHH2_400M_050219_1,8798 DOHH2_400M_050219_1,8798,VLRPLRPCRRY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8799 50.094 800.0 290250.0 25 0 57266.0 + 11509 GILSVLRSVPL 11 151 577.3667099376919 1152.7188669421837 2 577.3668701052666 MULTI CID FTMS 0 0 0 8784 104014.953125 0.672048168104188 -1 0.1167106628417968 15 Unmodified _GILSVLRSVPL_ REV__ENSG00000129084|ENST00000396394|PSMA1;REV__ENST00000526443.5_1_11:14535901-14541492:-|nuORF;REV__ENST00000528307.5_1_11:14535901-14541893:-|nuORF;REV__nc|ENSG00000129084|P25786-2|PSMA1 5.731851221503515 0.8481046878870278 1 Y 1 -1 11.783 0.0 0.0 1.0222 0.0 0.0 971.6446004400336 0.0 971.6446004400336 0.0 1.6016757542968385 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0222 - 30 + 1 2.093 172709.8 0.5400000214576721 5221 3576 8784 DOHH2_400M_050219_1,8799 DOHH2_400M_050219_1,8799,GILSVLRSVPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8800 50.108 800.0 81711.0 25 0 4410.9 + 43416 ISALEEQLQQIRAE 14 80 814.4372570808032 1626.8599612284063 2 814.4366943240166 MULTI CID FTMS 0 0 0 8784 85695.84375 1.0 0 0.0 16 Unmodified _WRELWRWRSRP_ ENSG00000186395|ENST00000269576|KRT10;P13645;P02535-1 4.189502756095605 0.855381588458882 1 {I|L}SA{I|L}EEQ{I|L}QQ{I|L} 11 10 124.58 0.0 0.0 7.6575 0.0 0.0 0.0 371.1688227590014 371.1688227590014 92.97283915761494 0.0 0.0 0.0 0 2.2658715643802765 0.9208187539523752 0.4247425010840047 1.1989700043360187 {I|L}SA{I|L}EEQ{I|L}QQ{I|L} 7.6575 - 3329 + 1 2.093 52539.3 0.4900000095367431 5222 3576 8784 DOHH2_400M_050219_1,8800 DOHH2_400M_050219_1,8800,WRELWRWRSRP False False ISALEEQLQQIRAE 50.108151 814.436694324017 431428.8125 8784.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 8.617040952046713 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8801 50.122 800.0 136340.0 25 0 10179.0 + 24356 MEPDIIRMY 9 120 584.2826798560027 1166.5508067788053 2 584.2823974490166 MULTI CID FTMS 0 0 0 8784 88867.1484375 1.0 0 0.0 17 Unmodified _MEPDIIRMY_ ENSG00000119844|ENST00000409933|AFTPH;ENST00000498706.5_1_2:64778608-64806757:+|nuORF;nc|ENSG00000119844|Q6ULP2-6|AFTPH;nc|ENSG00000119844|Q6ULP2-7|AFTPH;nc|ENSG00000119844|Q6ULP2-8|AFTPH;nc|ENSG00000119844|Q6ULP2-9|AFTPH 22.736283301280096 0.2418982879461534 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}{I|L}{[WT]|[RM]}Y 9 0 + 32.127 0.0 0.0 2.754 2.754 80.275 0.0 0.0 0.0 18.631674952134112 5.923001540388071 5.923001540388071 14.490925311194191 0 0.3252574989159953 0.0 0.0 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}{I|L}{[WT]|[RM]}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}{I|L}D{[WT]|[RM]}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}{I|L}{[WT]|[RM]}DY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}{I|L}[W{I|L}]CY;[WD][NG]{I|L}{I|L}{[WT]|[RM]}Y 2.754;1.5118;0.9126;0.73762;0.60975 +;-;-;-;- + 257 + 1 2.093 85477.7 0.449999988079071 5223 3576 8784 DOHH2_400M_050219_1,8801 DOHH2_400M_050219_1,8801,MEPDIIRMY False True MEPDIIRMY 50.121983 584.282397449017 563844.0625 8784.0 nc|ENSG00000119844|Q6ULP2-8|AFTPH;;ENST00000498706.5_1_2:64778608-64806757:+|nuORF;;nc|ENSG00000119844|Q6ULP2-7|AFTPH;;nc|ENSG00000119844|Q6ULP2-9|AFTPH;;nc|ENSG00000119844|Q6ULP2-6|AFTPH;;ENSG00000119844|ENST00000409933|AFTPH 3.5071723461151123 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8802 50.133 589.0 221920.0 25 0 11030.0 -1 0 164 440.243062440155 439.235785973555 1 442.2570373415947 MULTI CID FTMS 0 0 0 8784 151646.59375 1.0 0 0.0 18 1 {I|L} 1 -1 9.5329 0.0 0.0 2.1703 0.0 0.0 308.1409506237487 0.0 308.1409506237487 0.0 5.068941422428166 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.1703 - 24 + 1 2.093 111404.1 1.0 5224 3576 8784 DOHH2_400M_050219_1,8802 DOHH2_400M_050219_1,8802, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8803 50.137 212.0 247890.0 25 0 29543.0 + 25631 KSELGLNFY 9 89 535.2785330150916 1068.5425130969832 2 535.7792236208916 MULTI CID FTMS 0 0 0 8784 128346.9765625 0.5892798175875444 -2 0.2016944885253906 19 Unmodified _NFPRLYPY_ ENSG00000198839|ENST00000361822|ZNF277 13.50788311687929 0.7113601687236069 1 N{I|L}G{I|L}T[QP] 7 5 26.6 0.0 0.0 2.4894 0.0 0.0 327.141743280982 0.0 327.141743280982 0.0 7.136345642114357 0.0 0.0 0 0.4247425010840047 0.0 0.6549471895720984 0.4247425010840047 N{I|L}G{I|L}T[QP] 2.4894 - 111 + 1 2.093 45641.6 1.0 5225 3576 8784 DOHH2_400M_050219_1,8803 DOHH2_400M_050219_1,8803,NFPRLYPY False False KSELGLNFY 50.137474 535.779223620892 3349810.75 8784.0 ENSG00000198839|ENST00000361822|ZNF277 4.653933684031169 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8804 50.151 800.0 125250.0 25 0 13888.0 22747 LQLLSDVL 8 138 450.7729916337954 899.531430334391 2 450.7724487185478 MULTI CID FTMS 0 0 0 8784 120205.1796875 1.0 0 0.0 20 Unmodified _LQLLSDVL_ ENSG00000198718|ENST00000361462|TOGARAM1;ENST00000555607.1_1_14:45431624-45475488:+|nuORF;ENST00000555945.1_1_14:45431624-45465140:+|nuORF;nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1;nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1;nc|ENSG00000198718|Q9Y4F4|TOGARAM1 5.760428011301431 0.7893668129297577 1 {I|L} 1 7 12.764 0.0 0.0 1.419 0.0 0.0 768.4362745500144 0.0 768.4362745500144 0.0 4.040572368805435 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.419 + + 21 + 1 2.093 77237.8 0.4699999988079071 5226 3576 8784 DOHH2_400M_050219_1,8804 DOHH2_400M_050219_1,8804,LQLLSDVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8806 50.156 2.7 18785000.0 25 0 1032900.0 -1 0 59 881.4126494107194 1760.810745888239 2 881.9138061404228 MULTI CID FTMS 0 0 0 8805 26455366.0 1.0 0 0.0 1 1 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 12 -1 66.54 0.0 0.0 3.779 0.0 0.0 358.21255360483866 0.0 358.21255360483866 0.0 52.83005071544309 0.0 0.0 0 0.0 0.0 0.0 1.274227503252014 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 3.779 - 752 + 1 2.093 41661.6 1.0 5227 3577 8805 DOHH2_400M_050219_1,8806 DOHH2_400M_050219_1,8806, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8807 50.157 34.0 2312900.0 25 0 361810.0 + 33894 SLFPNSPKW 9 72 538.282064515497 1074.549576097794 2 538.2825195193291 MULTI CID FTMS 0 0 0 8805 1789230.5 1.0 0 0.0 2 Unmodified _SLFPNSPKW_ ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF 55.23464941255904 0.0288927259679799 1 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW 9 0 + 96.278 0.0 0.0 8.9598 8.9598 93.687 0.0 0.0 0.0 68.88190082242268 12.25268461881508 12.25268461881508 9.208187539523747 0 0.75 2.0 1.1549471895720984 0.805462187404089 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]SPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PN[DV]{[{M(Oxidation (M))|F}H]|[RQ]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGG[DV]{[{M(Oxidation (M))|F}H]|[RQ]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG][DV]{[{M(Oxidation (M))|F}H]|[RQ]};{[TV]|[{I|L}S]}[MN][KP]W{[TV]|[{I|L}S]};{[CT]|[{M(Oxidation (M))|F}G]}KPS[PG]W{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]S[PG]W{[TV]|[{I|L}S]};[KP]S[NP]{M(Oxidation (M))|F}W{[TV]|[{I|L}S]} 8.9598;8.1029;7.4275;6.2563;5.3994;4.724;2.1742;2.0485;1.8993;1.335 +;-;-;-;-;-;-;-;-;- + 450 + 1 2.093 64592.9 1.0 5228 3577 8805 DOHH2_400M_050219_1,8807 DOHH2_400M_050219_1,8807,SLFPNSPKW True True SLFPNSPKW 50.15702 538.282519519329 58048716.0 8805.0 ENST00000531200.1_1_11:102398162-102401431:-|nuORF;;ENST00000533366.5_1_11:102395628-102401431:-|nuORF;;ENSG00000137673|ENST00000260227|MMP7 8.750669797261557 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8808 50.158 56.0 656030.0 25 0 41487.0 -1 0 61 845.8940706328999 1689.7735883325995 2 846.3966552615166 MULTI CID FTMS 0 0 0 8805 777226.875 1.0 0 0.0 3 1 Y{M(Oxidation (M))|F}QGQW{[QC]|[C(Carbamidomethyl (C))A]}C(Carbamidomethyl (C)){I|L} 10 -1 56.904 0.0 0.0 3.3676 0.0 0.0 358.2231035673736 0.0 358.2231035673736 0.0 49.91434719156942 0.0 0.0 0 0.3494850021680094 0.0 0.0 1.305462187404089 Y{M(Oxidation (M))|F}QGQW{[QC]|[C(Carbamidomethyl (C))A]}C(Carbamidomethyl (C)){I|L} 3.3676 - 403 + 1 2.093 31100.9 1.0 5229 3577 8805 DOHH2_400M_050219_1,8808 DOHH2_400M_050219_1,8808, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8809 50.16 73.0 815980.0 25 0 94105.0 + 7011 EEKPIEIQW 9 89 586.3030452840359 1170.5915376348717 2 586.3036376833916 MULTI CID FTMS 0 0 0 8805 746300.5625 1.0 0 0.0 4 Unmodified _EEKPIEIQW_ ENSG00000113460|ENST00000336767|BRIX1 60.07390631473393 0.0260411565414776 1 [{I|L}P]EKEE{I|L}QW 9 4 + 69.154 0.0 0.0 5.9076 5.9076 84.097 0.0 0.0 0.0 7.88464761867634 15.618189680620103 7.88464761867634 6.197887582883944 0 0.7742275032520141 1.3979400086720375 1.8807196863200843 0.4247425010840047 [{I|L}P]EKEE{I|L}QW;[{I|L}P]E{I|L}[SG]E{I|L}QW;EE[K{I|L}]PE{I|L}QW;[{I|L}P]EKEE{I|L}[AG]W;[{I|L}P]E{I|L}KQEEW;{[QN]|[E{I|L}]|[KN]}PKEE{I|L}QW;[{I|L}P]E{I|L}QKEEW;[{I|L}P]EK{I|L}QEEW;[{I|L}P]EAAP{M(Oxidation (M))|F}{I|L}Q{[DA]|[EG]};[{I|L}P]E{I|L}KEEQW 5.9076;5.3781;5.234;5.121;4.9682;4.96;4.8178;4.7111;4.5734;4.4802 -;-;-;-;-;-;-;-;-;- 728 1 2.093 49108.3 1.0 5230 3577 8805 DOHH2_400M_050219_1,8809 DOHH2_400M_050219_1,8809,EEKPIEIQW True True EEKPIEIQW 50.16017 586.303637683392 6678659.5 8805.0 ENSG00000113460|ENST00000336767|BRIX1 5.686591625213623 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8810 50.164 185.0 441250.0 25 0 49504.0 + 419 AEEKPIEIQW 10 109 621.8227606833327 1241.6309684334651 2 621.8234130740166 MULTI CID FTMS 0 0 0 8805 307190.78125 1.0 0 0.0 5 Unmodified _AEEKPIEIQW_ ENSG00000113460|ENST00000336767|BRIX1 49.55428908609986 0.0827668555218455 1 [{I|L}P]EKEAE{I|L}QW 10 4 + 75.895 0.0 0.0 6.1125 6.1125 82.313 0.0 0.0 0.0 8.625493647488042 16.53212513775344 8.625493647488042 3.4948500216800937 0 0.3494850021680094 1.154901959985743 1.6237125054200234 0.0 [{I|L}P]EKEAE{I|L}QW;[{I|L}P]E{I|L}QSE{I|L}QW;[{I|L}P]E{I|L}[SG]AE{I|L}QW;{[QN]|[E{I|L}]|[KN]}PKEAE{I|L}QW;[{I|L}P]EKEAE{I|L}[AG]W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}P]EAE{I|L}QW;{[QN]|[E{I|L}]|[KN]}P{I|L}QSE{I|L}QW;[{I|L}P]E{I|L}QSE{I|L}[AG]W;[{I|L}P]E{I|L}[AG]SE{I|L}QW;{[QN]|[E{I|L}]|[KN]}P{I|L}[SG]AE{I|L}QW 6.1125;5.8311;5.6169;5.4179;5.3744;5.1434;5.1364;5.093;5.093;4.9222 -;-;-;-;-;-;-;-;-;- 1333 1 2.093 65058.1 1.0 5231 3577 8805 DOHH2_400M_050219_1,8810 DOHH2_400M_050219_1,8810,AEEKPIEIQW True True AEEKPIEIQW 50.163761 621.823413074017 3120012.0 8805.0 ENSG00000113460|ENST00000336767|BRIX1 3.829623460769653 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8811 50.17 339.0 235270.0 25 0 14852.0 -1 0 103 595.9305295846711 1784.7697593542134 3 596.2641479372978 MULTI CID FTMS 0 0 0 8805 258344.734375 1.0 0 0.0 6 1 Y{M(Oxidation (M))|F}ANQQAE 8 -1 49.986 0.0 0.0 2.8007 0.0 0.0 358.21950606211504 472.1179293268188 830.3374353889338 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 Y{M(Oxidation (M))|F}ANQQAE 2.8007 - 863 + 1 2.093 64950.7 1.0 5232 3577 8805 DOHH2_400M_050219_1,8811 DOHH2_400M_050219_1,8811, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8812 50.174 243.0 232970.0 25 0 43468.0 + 42391 VTDSGPTFNYL 11 90 607.2898079542232 1212.5650629752463 2 607.2907592654228 MULTI CID FTMS 0 0 0 8805 238293.1875 0.3294212576617386 -1 0.16949462890625 7 Unmodified _VTDSGPTFNYL_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 34.40172386719151 0.2986346176549658 1 [TP]G{[ES]|[DT]|[{I|L}C]}W{M(Oxidation (M))|F}N[Y{I|L}] 10 5 + 38.772 0.0 0.0 3.1975 3.1975 68.284 0.0 0.0 0.0 3.2559818715471778 16.659035165808277 3.2559818715471778 0.477663024715298 0 0.5 0.6777807052660807 2.1342508469929857 0.0 [TP]G{[ES]|[DT]|[{I|L}C]}W{M(Oxidation (M))|F}N[Y{I|L}];[TP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}W{M(Oxidation (M))|F}N[Y{I|L}];[TP][YQ]DTVN[Y{I|L}];[TP]G{[ES]|[DT]|[{I|L}C]}SV{M(Oxidation (M))|F}N[Y{I|L}];[TP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}SV{M(Oxidation (M))|F}N[Y{I|L}];[TP]G{[ES]|[DT]|[{I|L}C]}S{M(Oxidation (M))|F}VN[Y{I|L}];[TP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{M(Oxidation (M))|F}VN[Y{I|L}];[TP]G[WY]TVN[Y{I|L}];[YN][SG][HV]{M(Oxidation (M))|F}N[Y{I|L}];[TP][K{I|L}][DC]{M(Oxidation (M))|F}N[Y{I|L}] 3.1975;3.1581;3.1245;2.9951;2.9521;2.8557;2.8127;2.6647;2.6084;2.5403 -;-;-;-;-;-;-;-;-;- 982 1 2.093 46419.3 1.0 5233 3577 8805 DOHH2_400M_050219_1,8812 DOHH2_400M_050219_1,8812,VTDSGPTFNYL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8813 50.188 800.0 183910.0 25 0 59375.0 + 20128 LKLSRRPHLV 10 100 609.892492809878 1217.770432686556 2 609.8927490115166 MULTI CID FTMS 0 0 0 8805 210301.359375 1.0 0 0.0 8 Unmodified _LKLSRRPHLV_ REV__ENSG00000128294|ENST00000338754|TPST2 3.5964929083625545 0.7100006075494749 1 EAE 3 -1 16.198 0.0 0.0 1.3301 0.0 0.0 158.27783122346847 727.3505343072874 885.6283655307559 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EAE 1.3301 - 34 + 1 2.093 113186.1 0.7599999904632568 5234 3577 8805 DOHH2_400M_050219_1,8813 DOHH2_400M_050219_1,8813,LKLSRRPHLV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8814 50.196 457.0 150540.0 25 0 34428.0 40368 VHVILHFKNKY 11 91 699.4091105065006 1396.8036680798011 2 699.4090453982353 MULTI CID FTMS 0 0 0 8805 187414.484375 0.2118520260422771 3 -0.4305953979492187 9 Unmodified _VHVILHFKNKY_ ENSG00000269058|ENST00000269881|CALR3 2.9952420565917617 0.861016188266951 1 Y 1 10 10.485 0.0 0.0 0.75061 0.0 0.0 1215.7287149321432 0.0 1215.7287149321432 0.0 1.4501730568125917 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.75061 + + 34 + 1 2.093 65569.0 1.0 5235 3577 8805 DOHH2_400M_050219_1,8814 DOHH2_400M_050219_1,8814,VHVILHFKNKY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8815 50.21 800.0 120050.0 25 0 37131.0 + 30237 QWSRLRRRAGR 11 97 721.4224614894051 1440.8303700456102 2 721.4216186404228 MULTI CID FTMS 0 0 0 8805 154424.578125 0.3619922948232235 -2 0.2862052917480469 10 Unmodified _QWSRLRRRAGR_ REV__ENST00000343028.8_3_12:27167184-27167292:-|nuORF 1.3295316138638542 0.8688751186870782 1 Y 1 -1 10.089 0.0 0.0 0.7002 0.0 0.0 1259.7557678501007 0.0 1259.7557678501007 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.7002 - 14 + 1 2.093 84940.4 0.6399999856948853 5236 3577 8805 DOHH2_400M_050219_1,8815 DOHH2_400M_050219_1,8815,QWSRLRRRAGR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8816 50.224 800.0 127770.0 25 0 12448.0 + 1328 FVELPDNHSSLIY 13 105 767.3819953543209 1532.7494377754415 2 767.3828613162041 MULTI CID FTMS 0 0 0 8805 127811.765625 1.0 0 0.0 11 Unmodified _AIYHKYYHYLY_ ENSG00000054116|ENST00000373166|TRAPPC3;nc|ENSG00000054116|O43617-2|TRAPPC3;ENST00000462715.1_1_1:36603336-36605749:-|nuORF 13.90604991867851 0.7458848613461305 1 [{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))G]|[NC]}SS{I|L}{I|L}E[{M(Oxidation (M))|F}V]{I|L}Y 13 11 + 89.941 0.0 0.0 5.8679 5.8679 80.16 0.0 0.0 0.0 2.701916365363985 16.642078980768062 2.701916365363985 2.701916365363985 0 1.1549471895720984 0.0 2.0356668758921828 1.1549471895720984 [{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))G]|[NC]}SS{I|L}{I|L}E[{M(Oxidation (M))|F}V]{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}{I|L}E[{M(Oxidation (M))|F}V]{I|L}Y;[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))G]|[NC]}SS{I|L}{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}Y;[{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}D{I|L}{I|L}E[{M(Oxidation (M))|F}V]{I|L}Y;[{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}D{I|L}{I|L}E{I|L}V{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}Y;[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))G]|[NC]}SS{I|L}{I|L}E{I|L}V{M(Oxidation (M))|F}Y;[{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}D{I|L}{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}Y;[YQ][DG]SS{I|L}{I|L}E[{M(Oxidation (M))|F}V]{I|L}Y;[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))G]|[NC]}SS{I|L}{I|L}{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}Y 5.8679;5.6917;5.6428;5.6414;5.4675;5.4665;5.4169;5.4163;5.3312;5.2795 -;-;-;-;-;-;-;-;-;- 2987 1 2.093 78821.1 0.5699999928474426 5237 3577 8805 DOHH2_400M_050219_1,8816 DOHH2_400M_050219_1,8816,AIYHKYYHYLY False False FVELPDNHSSLIY 50.224101 767.382861316204 944565.25 8805.0 ENSG00000054116|ENST00000373166|TRAPPC3;;nc|ENSG00000054116|O43617-2|TRAPPC3;;ENST00000462715.1_1_1:36603336-36605749:-|nuORF 6.563170433044434 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8817 50.238 800.0 137600.0 25 0 5432.5 -1 0 125 600.5933280649753 1798.7581547951256 3 600.5936157107353 MULTI CID FTMS 0 0 0 8805 114507.71875 1.0 0 0.0 12 1 [QA]HD 4 -1 35.732 0.0 0.0 1.9865 0.0 0.0 0.0 1344.5539976508476 1344.5539976508476 19.0500233001784 0.0 0.0 0.0 0 1.3494850021680094 0.6575773191777937 0.0 0.8494850021680094 [QA]HD 1.9865 - 196 1 2.093 85341.5 0.550000011920929 5238 3577 8805 DOHH2_400M_050219_1,8817 DOHH2_400M_050219_1,8817, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8818 50.248 463.0 182240.0 25 0 24972.0 27120 PFLLVMKPLSY 11 106 654.3751390967756 0 654.3755981326103 PEAK CID FTMS 0 0 0 8805 109165.6640625 1.0 0 0.0 13 Unmodified _PFLLVMKPLSY_ ENST00000295951.7_1_3:57913451-57913754:+|nuORF 3.2813086475875832 0.4761840153648598 1 H 1 11 3.0989 0.0 0.0 0.23715 0.0 0.0 383.2649133480448 783.4026005194788 1166.6675138675237 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.23715 - 15 + 1 2.093 72587.8 1.0 5239 3577 8805 DOHH2_400M_050219_1,8818 DOHH2_400M_050219_1,8818,PFLLVMKPLSY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8819 50.261 800.0 108200.0 25 0 6027.8 + 32915 SEKGVDFVLNY 11 118 635.819807385657 1269.625061838114 2 635.8208495974541 MULTI CID FTMS 0 0 0 8805 94596.9921875 1.0 0 0.0 14 Unmodified _SEKGVDFVLNY_ ENSG00000012779|ENST00000374391|ALOX5;nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-3|ALOX5;nc|ENSG00000012779|P09917-4|ALOX5;nc|ENSG00000012779|P09917-5|ALOX5 69.33821966488729 0.0343223916712224 1 {[QV]|[N{I|L}]|[RA]|[KV]}[TA]TD{M(Oxidation (M))|F}V{I|L}NY 11 5 + 56.168 0.0 0.0 4.424 4.424 72.266 0.0 0.0 0.0 3.9962770805331047 35.222365090684576 3.9962770805331047 0.6694678963061307 0 1.1237125054200234 0.0 1.309894379144197 0.6382104921644451 {[QV]|[N{I|L}]|[RA]|[KV]}[TA]TD{M(Oxidation (M))|F}V{I|L}NY;{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}VD{M(Oxidation (M))|F}V{I|L}NY;[YN][R{I|L}]V{I|L}C{I|L}NY;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}[WK]GV{I|L}NY;{[ES]|[DT]|[{I|L}C]}[RK]D{M(Oxidation (M))|F}V{I|L}NY;{[ES]|[DT]|[{I|L}C]}[KG]VD{M(Oxidation (M))|F}V{I|L}NY;[{I|L}V]{M(Oxidation (M))|F}{[SA]|[TG]}K{I|L}C{I|L}NY;{[QV]|[N{I|L}]|[RA]|[KV]}[TA]{M(Oxidation (M))|F}V{I|L}C{I|L}NY;{[MG]|[TS]}{[NV]|[RG]}VD{M(Oxidation (M))|F}V{I|L}NY;[MT]{I|L}[TA]K{I|L}C{I|L}NY 4.424;4.3712;3.758;3.7073;3.6395;3.4918;3.4914;3.455;3.4155;3.4048 -;-;-;-;-;+;-;-;-;- + 1196 1 2.093 74195.2 0.550000011920929 5240 3577 8805 DOHH2_400M_050219_1,8819 DOHH2_400M_050219_1,8819,SEKGVDFVLNY True True SEKGVDFVLNY 50.261421 635.820849597454 921816.0 8805.0 nc|ENSG00000012779|P09917-3|ALOX5;;nc|ENSG00000012779|P09917-4|ALOX5;;nc|ENSG00000012779|P09917-2|ALOX5;;ENSG00000012779|ENST00000374391|ALOX5;;nc|ENSG00000012779|P09917-5|ALOX5 7.260677337646484 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8820 50.275 800.0 91915.0 25 0 4764.2 -1 0 70 1175.219165027142 0 1175.219165027142 PEAK CID FTMS 0 0 0 -1 0 15 1 VQY{M(Oxidation (M))|F}ANQQAE 10 -1 71.235 0.0 0.0 3.0333 0.0 0.0 718.6980866061448 448.1638134060262 1166.861900012171 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.7614393726401688 VQY{M(Oxidation (M))|F}ANQQAE 3.0333 - 986 + 1 2.093 54542.4 0.6200000047683716 5241 3577 8805 DOHH2_400M_050219_1,8820 DOHH2_400M_050219_1,8820, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8821 50.29 800.0 185600.0 25 0 39717.0 + 10434 FTDVNSILRY 10 122 614.322030695783 1226.629508458366 2 614.3215209841728 MULTI CID FTMS 0 0 0 8805 188334.703125 0.1700208825125503 1 -0.188812255859375 16 Unmodified _FTDVNSILRY_ ENSG00000136628|ENST00000366923|EPRS1 43.9818466556824 0.1155196613165264 1 NVDTE 5 9 49.068 0.0 0.0 4.0002 0.0 0.0 650.3768443311012 0.0 650.3768443311012 0.0 36.59379381312206 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.4247425010840047 NVDTE 4.0002 - 191 1 2.093 111250.9 0.75 5242 3577 8805 DOHH2_400M_050219_1,8821 DOHH2_400M_050219_1,8821,FTDVNSILRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8822 50.304 800.0 76143.0 25 0 4097.3 -1 0 77 921.9364126702988 0 921.9368163943292 PEAK CID FTMS 0 0 0 8805 171017.421875 1.0 0 0.0 17 1 Y{M(Oxidation (M))|F}ADQQ 6 -1 37.409 0.0 0.0 2.0311 0.0 0.0 358.22122732679287 728.3020402167546 1086.5232675435475 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 Y{M(Oxidation (M))|F}ADQQ 2.0311 - 299 + 1 2.093 47538.7 0.6399999856948853 5243 3577 8805 DOHH2_400M_050219_1,8822 DOHH2_400M_050219_1,8822, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8823 50.318 800.0 98574.0 25 0 3095.6 -1 0 117 892.400171252362 1782.785789571524 2 892.9041625857353 MULTI CID FTMS 0 0 0 8805 130653.5078125 1.0 0 0.0 18 1 [QA]HG{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]QNA{M(Oxidation (M))|F}[{I|L}A][WM] 15 -1 + 33.756 0.0 0.0 1.8934 1.8934 81.14 0.0 0.0 0.0 1.3765681796961218 11.53704958203646 1.3765681796961218 33.75553707820002 0 0.4247425010840047 0.0 0.0 0.2887254899964357 [QA]HG{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]QNA{M(Oxidation (M))|F}[{I|L}A][WM] 1.8934 - 957 1 2.093 59464.6 0.5699999928474426 5244 3577 8805 DOHH2_400M_050219_1,8823 DOHH2_400M_050219_1,8823, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8824 50.326 392.0 144530.0 25 0 33862.0 + 30238 QWSRLRRRAGR 11 80 481.2835363631703 1440.828779689711 3 481.2839233279228 MULTI CID FTMS 0 0 0 8805 133935.984375 0.4475894591176289 -3 0.3711891174316406 19 Unmodified _QWSRLRRRAGR_ REV__ENST00000343028.8_3_12:27167184-27167292:-|nuORF 0.3506318815782774 0.8734936314171269 1 Y 1 -1 11.594 0.0 0.0 0.80466 0.0 0.0 1259.7541622354124 0.0 1259.7541622354124 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.80466 - 9 + 1 2.093 62418.3 1.0 5245 3577 8805 DOHH2_400M_050219_1,8824 DOHH2_400M_050219_1,8824,QWSRLRRRAGR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8825 50.34 800.0 79590.0 25 0 6566.5 -1 ASKCLKASF 9 109 527.2734320832834 1052.5323112333667 2 527.2736083865166 MULTI CID FTMS 0 0 0 8805 130602.2734375 1.0 0 0.0 20 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))ASKC(Carbamidomethyl (C))LKASF_ CON__Q497I4 10.823927491677226 0.5436922275383211 1 {[CP]|[EA]}M 3 -1 14.265 0.0 0.0 1.3553 0.0 0.0 0.0 718.3928927057249 718.3928927057249 0.2853716820872183 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[CP]|[EA]}M 1.3553 - 76 + 1 2.093 54111.7 0.5600000023841858 5246 3577 8805 DOHH2_400M_050219_1,8825 DOHH2_400M_050219_1,8825,ASKCLKASF False False False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 8827 50.345 5.6 9286800.0 25 0 816470.0 + 13792 HTDDPLTWDY 10 57 631.7696856833676 1261.524818433535 2 631.7702514529228 MULTI CID FTMS 0 0 0 8826 9962343.0 1.0 0 0.0 1 Unmodified _HTDDPLTWDY_ ENSG00000108651|ENST00000261708|UTP6;ENST00000583408.5_1_17:30207568-30228646:-|nuORF 56.17704186161178 0.0466144807663799 1 {[WT]|[RM]}DY{I|L}TWDY 9 3 + 80.896 0.0 0.0 6.4125 6.4125 89.339 0.0 0.0 0.0 16.00833760139686 16.478174818886373 16.00833760139686 9.208187539523747 0 0.9247425010840048 1.3010299956639813 0.8807196863200843 0.4247425010840047 {[WT]|[RM]}DY{I|L}TWDY;{[WT]|[RM]}DY{I|L}T{[DA]|[EG]}DY;[WD]TY{I|L}TWDY;[HT]DDP{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TWDY;{[WT]|[RM]}DY{I|L}G{[ET]|[MV]}DY;{[YD]|[{M(Oxidation (M))|F}M]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RTWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}T{[DA]|[EG]}DY;{[WT]|[RM]}DY[VP]{[CT]|[{M(Oxidation (M))|F}G]}DY;{[YD]|[{M(Oxidation (M))|F}M]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RT{[DA]|[EG]}DY 6.4125;5.6826;5.1436;5.0799;5.049;5.0476;4.8104;4.3191;4.2772;4.0804 -;-;-;+;-;-;-;-;-;- + 669 1 2.079 45668.7 1.0 5247 3578 8826 DOHH2_400M_050219_1,8827 DOHH2_400M_050219_1,8827,HTDDPLTWDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8828 50.346 69.0 609230.0 25 0 80521.0 9636 FLMVRNLKV 9 63 560.3403480662034 1118.6661431992068 2 560.3405639529228 MULTI CID FTMS 0 0 0 8826 512097.0625 0.3458896493566625 1 -0.1170272827148437 2 Unmodified _FLMVRNLKV_ ENSG00000174837|ENST00000312053|ADGRE1;nc|ENSG00000174837|Q14246-2|ADGRE1;nc|ENSG00000174837|Q14246-3|ADGRE1;nc|ENSG00000174837|Q14246-4|ADGRE1;nc|ENSG00000174837|Q14246-5|ADGRE1 5.230669730166228 0.7320841359114558 1 M{I|L}W 3 7 13.188 0.0 0.0 1.1789 0.0 0.0 129.1506535525255 556.2754000299436 685.4260535824692 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L}W 1.1789 - 14 + 1 2.079 38077.6 1.0 5248 3578 8826 DOHH2_400M_050219_1,8828 DOHH2_400M_050219_1,8828,FLMVRNLKV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8829 50.347 41.0 1311000.0 25 0 93249.0 + 445 AEFKEAFQL 9 77 541.7793053603124 1081.544057787425 2 541.7797729372978 MULTI CID FTMS 0 0 0 8826 1368445.375 1.0 0 0.0 3 Unmodified _AEFKEAFQL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 61.60191391372663 0.0251951588191061 1 {[CP]|[EA]}{M(Oxidation (M))|F}KEA{M(Oxidation (M))|F}Q{I|L} 9 0 + 54.403 0.0 0.0 5.0301 5.0301 80.683 0.0 0.0 0.0 9.44968960007344 40.85619420485331 9.44968960007344 6.020599913279625 0 1.3494850021680094 0.0 0.805462187404089 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}KEA{M(Oxidation (M))|F}Q{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}RTA{M(Oxidation (M))|F}Q{I|L};{[MS]|[{M(Oxidation (M))|F}A]}EKEA{M(Oxidation (M))|F}Q{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}K{M(Oxidation (M))|F}{[CP]|[EA]}Q{I|L};[AG]{I|L}YAEA{M(Oxidation (M))|F}Q{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}[VG]TA{M(Oxidation (M))|F}Q{I|L};[Q{I|L}]YAEA{M(Oxidation (M))|F}Q{I|L};{[MS]|[{M(Oxidation (M))|F}A]}EK{M(Oxidation (M))|F}{[CP]|[EA]}Q{I|L};[AG]{I|L}YA{M(Oxidation (M))|F}{[CP]|[EA]}Q{I|L};{[MS]|[{M(Oxidation (M))|F}A]}E[VG]TA{M(Oxidation (M))|F}Q{I|L} 5.0301;4.4734;4.0648;4.0618;3.9915;3.622;3.4739;3.0965;2.7001;2.6567 +;-;-;-;-;-;-;-;-;- + 536 1 2.079 48338.6 1.0 5249 3578 8826 DOHH2_400M_050219_1,8829 DOHH2_400M_050219_1,8829,AEFKEAFQL True True AEFKEAFQL 50.347473 541.779772937298 7449759.5 8826.0 MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;;nc|ENSG00000092841|P60660-2|MYL6;;ENSG00000092841|ENST00000550697|MYL6;;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;;ENST00000548725.5_1_12:56552185-56553955:+|nuORF 7.367453098297119 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8830 50.349 35.0 949730.0 25 0 70067.0 + -1 FFFYCLFCFVI 11 51 781.8651441146907 1561.7157352961813 2 782.3666869997978 MULTI CID FTMS 0 0 0 8826 1200860.25 1.0 0 0.0 4 2 Carbamidomethyl (C) _FFFYC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))FVI_ REV__ENSG00000164197|ENST00000389100|RNF180 3.5964929083625545 0.858179447565866 1 [KT][YE]{M(Oxidation (M))|F}ANQQ 9 -1 26.661 0.0 0.0 1.7071 0.0 0.0 0.0 449.1455477350219 449.1455477350219 13.551434250963936 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [KT][YE]{M(Oxidation (M))|F}ANQQ 1.7071 - 225 + 1 2.079 32640.1 1.0 5250 3578 8826 DOHH2_400M_050219_1,8830 DOHH2_400M_050219_1,8830,FFFYCLFCFVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8831 50.35 45.0 1524600.0 25 0 285650.0 + + -1 RADGNFLLY 9 64 534.7776686277763 0 534.7778198122978 PEAK CID FTMS 0 0 0 8826 1189467.25 1.0 0 0.0 5 Oxidation (M) _IIM(Oxidation (M))VWDLY_ ENST00000474515.5_1_22:45593059-45598540:-|nuORF;nc|ENSG00000100364|Q6ICG6-3|KIAA0930;ENSG00000100364|ENST00000336156|KIAA0930;ENST00000498418.5_1_22:45593059-45595943:-|nuORF;ENST00000483374.1_1_22:45593059-45593908:-|nuORF;nc|ENSG00000100364|Q6ICG6-2|KIAA0930 20.871210003555333 0.4015059659087983 1 {I|L}{I|L}{M(Oxidation (M))|F} 3 -1 24.693 0.0 0.0 2.313 0.0 0.0 181.07224093056385 510.2080330534631 691.280273984027 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F} 2.313 + + 18 + 1 2.079 55790.5 1.0 5251 3578 8826 DOHH2_400M_050219_1,8831 DOHH2_400M_050219_1,8831,IIMVWDLY False False RADGNFLLY 50.349916 534.777819812298 17049502.0 8826.0 ENST00000474515.5_1_22:45593059-45598540:-|nuORF;;nc|ENSG00000100364|Q6ICG6-3|KIAA0930;;ENSG00000100364|ENST00000336156|KIAA0930;;ENST00000498418.5_1_22:45593059-45595943:-|nuORF;;ENST00000483374.1_1_22:45593059-45593908:-|nuORF;;nc|ENSG00000100364|Q6ICG6-2|KIAA0930 7.129785696665446 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8832 50.351 59.0 1480200.0 25 0 284800.0 + 31628 RRFFPYYVY 9 59 655.8375829388302 1309.6606129444604 2 655.8378784060478 MULTI CID FTMS 0 0 0 8826 944980.375 0.3991661583704558 -1 0.188812255859375 6 Unmodified _RRFFPYYVY_ ENSG00000008018|ENST00000262193|PSMB1 36.04419817259434 0.0971720506436186 1 YVY 3 6 29.169 0.0 0.0 2.2272 0.0 0.0 866.456534734186 0.0 866.456534734186 0.0 21.2101498947667 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + YVY 2.2272 + + 19 1 2.079 69819.1 1.0 5252 3578 8826 DOHH2_400M_050219_1,8832 DOHH2_400M_050219_1,8832,RRFFPYYVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8833 50.354 108.0 742210.0 25 0 103660.0 42186 VSEAQWRHK 9 70 570.8016708290138 0 570.8017455935478 PEAK CID FTMS 0 0 0 8826 570820.4375 1.0 0 0.0 7 Unmodified _VSEAQWRHK_ ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;ENST00000554557.5_1_14:68248216-68272009:-|nuORF;ENST00000557407.1_1_14:68264347-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-4|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 7.289230182591677 0.3433663536648894 1 VS{I|L}{I|L} 4 7 17.044 0.0 0.0 1.4956 0.0 0.0 215.05108526432903 509.2422733046467 724.2933585689757 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 VS{I|L}{I|L} 1.4956 - 49 + 1 2.079 66237.1 1.0 5253 3578 8826 DOHH2_400M_050219_1,8833 DOHH2_400M_050219_1,8833,VSEAQWRHK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8834 50.356 87.0 963980.0 25 0 104800.0 + 31630 RRFFPYYVY 9 70 437.5609506352158 1309.6610225058475 3 437.5609008669853 MULTI CID FTMS 0 0 0 8826 495546.21875 0.3333267540230906 -1 0.188812255859375 8 Unmodified _RRFFPYYVY_ ENSG00000008018|ENST00000262193|PSMB1 42.09456458481378 0.0639583784996157 1 PYYVY 5 4 41.186 0.0 0.0 3.1448 0.0 0.0 606.3399652236325 0.0 606.3399652236325 0.0 30.21652514092061 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + PYYVY 3.1448 + + 21 1 2.079 73427.2 1.0 5254 3578 8826 DOHH2_400M_050219_1,8834 DOHH2_400M_050219_1,8834,RRFFPYYVY True True RRFFPYYVY 50.355652 437.560900866985 48681068.0 8826.0 ENSG00000008018|ENST00000262193|PSMB1 12.175809860229492 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8835 50.358 140.0 361660.0 25 0 29458.0 + 43940 YGKIAVMEL 9 82 512.2810011427829 1022.5474493523658 2 512.2809936404228 MULTI CID FTMS 0 0 0 8826 386139.3125 1.0 0 0.0 9 Unmodified _YGKIAVMEL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1 36.12702656103203 0.0967173616627612 1 [KG]Y{I|L}AVME{I|L} 9 2 + 59.715 0.0 0.0 5.8398 5.8398 80.596 0.0 0.0 0.0 3.679767852945943 15.91051766099227 3.679767852945943 3.0102999566398125 0 0.6861818737241735 0.0 0.0 0.0 [KG]Y{I|L}AVME{I|L};[KG]Y{I|L}AMVE{I|L};[YG]K{I|L}AVME{I|L};[KG]Y{I|L}G{I|L}ME{I|L};[YG]K{I|L}AMVE{I|L};[YG]K{I|L}G{I|L}ME{I|L};[KG]Y{I|L}GM{I|L}E{I|L};[VP][HK]AVME{I|L};[YG]K{I|L}GM{I|L}E{I|L};[VP][HK]AMVE{I|L} 5.8398;5.5455;5.48;5.3732;5.1856;5.0134;4.7845;4.4727;4.4246;4.1783 -;-;+;-;-;-;-;-;-;- + 254 1 2.079 45087.4 1.0 5255 3578 8826 DOHH2_400M_050219_1,8835 DOHH2_400M_050219_1,8835,YGKIAVMEL True True YGKIAVMEL 50.358481 512.280993640423 2882153.0 8826.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;;nc|ENSG00000167986|Q16531-2|DDB1 4.325073877970378 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8836 50.363 240.0 265810.0 25 0 63136.0 + 30317 RAARWKRQPL 10 62 641.3842396483013 1280.7539263634026 2 641.3845703005791 MULTI CID FTMS 0 0 0 8826 293595.09375 1.0 0 0.0 10 Unmodified _RAARWKRQPL_ REV__ENST00000555147.1_1_16:89984433-89984928:+|nuORF 1.4819007175156935 0.719781833666733 1 Y 1 -1 11.109 0.0 0.0 0.8674 0.0 0.0 1099.680285471604 0.0 1099.680285471604 0.0 10.73064017839119 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.8674 - 3 + 1 2.079 53440.7 1.0 5256 3578 8826 DOHH2_400M_050219_1,8836 DOHH2_400M_050219_1,8836,RAARWKRQPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8837 50.367 225.0 297840.0 25 0 26731.0 + + 32233 AEMEHLLERSWY 12 77 521.9134427237541 1562.7184987714622 3 521.9137451052666 MULTI CID FTMS 0 0 0 8826 266555.28125 1.0 0 0.0 11 Unmodified _RWHGWSWSLWY_ ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64900197-64901072:-|nuORF;ENST00000529207.5_1_11:64899759-64900720:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1 0.5059551277355931 0.8727608062196215 1 AEMEH{I|L}{I|L}EQ 9 -1 89.914 0.0 0.0 5.7537 0.0 0.0 0.0 479.2095430963501 479.2095430963501 69.50872436502529 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5 0.3807196863200844 AEMEH{I|L}{I|L}EQ 5.7537 - 629 + 1 2.079 59088.5 1.0 5257 3578 8826 DOHH2_400M_050219_1,8837 DOHH2_400M_050219_1,8837,RWHGWSWSLWY False False AEMEHLLERSWY 50.367214 521.913745105267 2374091.25 8826.0 ENSG00000162298|ENST00000377190|SYVN1;;ENST00000449943.5_1_11:64900197-64901072:-|nuORF;;ENST00000529207.5_1_11:64899759-64900720:-|nuORF;;nc|ENSG00000162298|Q86TM6-2|SYVN1;;nc|ENSG00000162298|Q86TM6-3|SYVN1 8.28448518117269 3.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8838 50.373 309.0 204070.0 25 0 24422.0 + 30044 QTTGAIFQM 9 109 498.74459165618345 995.4746303791668 2 498.7444946169853 MULTI CID FTMS 0 0 0 8826 194877.359375 1.0 0 0.0 12 Unmodified _QTTGAIFQM_ ENSG00000184574|ENST00000329858|LPAR5 49.93300154707207 0.0405168250806675 1 [QT]TQ{I|L} 5 5 27.083 0.0 0.0 2.7207 0.0 0.0 0.0 421.1541707446544 421.1541707446544 12.134928107446186 0.0 0.0 0.0 0 0.0 0.0 1.110924374808178 0.7302046884880937 [QT]TQ{I|L} 2.7207 - 180 1 2.079 54293.4 1.0 5258 3578 8826 DOHH2_400M_050219_1,8838 DOHH2_400M_050219_1,8838,QTTGAIFQM True True QTTGAIFQM 50.372842 498.744494616985 1320932.75 8826.0 ENSG00000184574|ENST00000329858|LPAR5 6.550320943196614 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8839 50.387 800.0 145190.0 25 0 13538.0 + 911 AEYNSDLHQFF 11 131 685.8048221203352 1369.5950913074705 2 685.8043701052666 MULTI CID FTMS 0 0 0 8826 184084.046875 1.0 0 0.0 13 Unmodified _AEYNSDLHQFF_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 64.9267550582149 0.0491502274424461 1 {[CP]|[EA]}YNSD{I|L}HQ{M(Oxidation (M))|F}{M(Oxidation (M))|F} 11 0 + 69.549 0.0 0.0 5.078 5.078 83.318 0.0 0.0 0.0 35.43237641846464 12.116356081644646 12.116356081644646 9.128498242811006 0 1.6549471895720984 0.0 0.3054621874040891 1.1307196863200843 + + {[CP]|[EA]}YNSD{I|L}HQ{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[CP]|[EA]}YGGSD{I|L}HQ{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[CP]|[EA]}YNSD{I|L}H[AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[CP]|[EA]}YN[TP]NSA{M(Oxidation (M))|F}AW;{[CP]|[EA]}YN[TP]NSA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};{[CP]|[EA]}YN[TP]NSD{[NV]|[RG]}{M(Oxidation (M))|F};{[CP]|[EA]}YNS[QP]SA{M(Oxidation (M))|F}AW;{[CP]|[EA]}YNS[QP]SA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};{[CP]|[EA]}YNS[QP]SD{[NV]|[RG]}{M(Oxidation (M))|F};{[CP]|[EA]}YN[TP]QN{[WT]|[RM]}{M(Oxidation (M))|F} 5.078;4.4115;4.174;4.116;4.0959;4.0959;3.614;3.5939;3.5939;3.5219 +;-;-;-;-;-;-;-;-;- + 5282 + 1 2.079 90728.3 0.7300000190734863 5259 3578 8826 DOHH2_400M_050219_1,8839 DOHH2_400M_050219_1,8839,AEYNSDLHQFF True True AEYNSDLHQFF 50.386679 685.804370105267 1141154.875 8826.0 ENST00000465029.5_1_2:111419157-111435602:-|nuORF;;nc|ENSG00000169679|O43683-2|BUB1;;ENSG00000169679|ENST00000302759|BUB1;;nc|ENSG00000169679|O43683-3|BUB1 8.71921968460083 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8840 50.395 455.0 129950.0 25 0 32135.0 -1 QKELRKQLKCK 11 88 729.9353324037635 1457.8561118743269 2 729.9348022341728 MULTI CID FTMS 0 0 0 8826 178243.078125 0.7300762187443981 -1 0.188812255859375 14 Carbamidomethyl (C) _QKELRKQLKC(Carbamidomethyl (C))K_ ENSG00000174473|ENST00000506823|GALNTL6;nc|ENSG00000174473|Q49A17-2|GALNTL6 4.897010918128616 0.8520435188433833 1 {I|L}ED 3 -1 14.693 0.0 0.0 1.0078 0.0 0.0 403.34629849717686 694.3364351861936 1097.6827336833703 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}ED 1.0078 - 40 + 1 2.079 53813.8 1.0 5260 3578 8826 DOHH2_400M_050219_1,8840 DOHH2_400M_050219_1,8840,QKELRKQLKCK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8841 50.398 170.0 240530.0 25 0 32078.0 + + 9788 LRNQSVFNF 9 72 562.7955903128901 0 562.7944213747978 PEAK CID FTMS 0 0 0 8826 182264.84375 1.0 0 0.0 15 Unmodified _FNVRNTLNF_ nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1;ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1 26.268140514670165 0.1442484609216422 1 DPW 3 -1 21.44 0.0 0.0 1.9082 0.0 0.0 164.0919878131495 558.2913437345485 722.3833315476979 0.0 0.0 0.0 0.0 0 0.5242275032520141 0.0 0.0 0.0 DPW 1.9082 - 35 + 1 2.079 37188.0 1.0 5261 3578 8826 DOHH2_400M_050219_1,8841 DOHH2_400M_050219_1,8841,FNVRNTLNF False False LRNQSVFNF 50.398081 562.794421374798 1050879.75 8826.0 nc|ENSG00000079459|P37268-4|FDFT1;;nc|ENSG00000079459|P37268-3|FDFT1;;nc|ENSG00000079459|P37268-5|FDFT1;;ENSG00000079459|ENST00000220584|FDFT1;;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;;nc|ENSG00000079459|P37268-2|FDFT1 4.869159698486328 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8842 50.412 800.0 132750.0 25 0 30001.0 16662 KELLQKLQIW 10 131 649.8980719680936 1297.7815910029872 2 649.8984252810478 MULTI CID FTMS 0 0 0 8826 161850.71875 1.0 0 0.0 16 Unmodified _KELLQKLQIW_ ENST00000258341.4_1_1:183105646-183106870:+|nuORF 1.4819007175156935 0.719781833666733 1 {I|L}{M(Oxidation (M))|F}QV{[C(Carbamidomethyl (C))E]|[WC]}NW 8 7 25.411 0.0 0.0 1.958 0.0 0.0 203.26481961802463 0.0 203.26481961802463 0.0 10.713789813707209 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {I|L}{M(Oxidation (M))|F}QV{[C(Carbamidomethyl (C))E]|[WC]}NW 1.958 - 921 + 1 2.079 95957.6 0.699999988079071 5262 3578 8826 DOHH2_400M_050219_1,8842 DOHH2_400M_050219_1,8842,KELLQKLQIW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8843 50.427 800.0 346450.0 25 0 22879.0 + 16672 KENPKEFFW 9 174 612.8057914886703 1223.5970300441404 2 612.8062011599541 MULTI CID FTMS 0 0 0 8826 156720.375 0.4619966764220806 -1 0.188812255859375 17 Unmodified _KENPKEFFW_ ENSG00000133641|ENST00000356891|C12orf29;ENST00000547468.1_1_12:88436564-88442196:+|nuORF;ENST00000548511.5_1_12:88429578-88437530:+|nuORF;ENST00000550333.5_1_12:88429286-88442196:+|nuORF;ENST00000552121.5_1_12:88429328-88442196:+|nuORF;ENST00000552803.5_1_12:88429407-88437530:+|nuORF;ENST00000552847.5_1_12:88429328-88439561:+|nuORF;nc|ENSG00000133641|Q8N999-3|RLIG1 128.57297698046145 0.0057676723676998 1 ENPEK{M(Oxidation (M))|F}{M(Oxidation (M))|F}W 8 3 78.384 0.0 0.0 6.4061 0.0 0.0 128.09544570136876 0.0 128.09544570136876 0.0 41.83259527691847 0.0 0.0 0 2.555462187404089 0.0 1.7095083459089813 1.3441876774005248 ENPEK{M(Oxidation (M))|F}{M(Oxidation (M))|F}W 6.4061 - 9858 1 2.079 210392.4 0.6700000166893005 5263 3578 8826 DOHH2_400M_050219_1,8843 DOHH2_400M_050219_1,8843,KENPKEFFW True True KENPKEFFW 50.426931 612.806201159954 2254774.0 8826.0 ENSG00000133641|ENST00000356891|C12orf29;;ENST00000552121.5_1_12:88429328-88442196:+|nuORF;;ENST00000550333.5_1_12:88429286-88442196:+|nuORF;;ENST00000552847.5_1_12:88429328-88439561:+|nuORF;;ENST00000552803.5_1_12:88429407-88437530:+|nuORF;;ENST00000548511.5_1_12:88429578-88437530:+|nuORF;;ENST00000547468.1_1_12:88436564-88442196:+|nuORF;;nc|ENSG00000133641|Q8N999-3|RLIG1 8.783225377400717 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8844 50.441 800.0 93497.0 25 0 11761.0 + 620 AEKRPIKRR 9 98 577.3667099376919 1152.7188669421837 2 577.3673583865166 MULTI CID FTMS 0 0 0 8826 147946.984375 0.9558962133672324 1 -0.1170272827148437 18 Unmodified _AEKRPIKRR_ REV__ENSG00000134668|ENST00000360482|SPOCD1;REV__nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;REV__nc|ENSG00000134668|Q6ZMY3-5|SPOCD1 0.5247636613948944 0.8963649302248013 1 Y 1 -1 13.495 0.0 0.0 1.1707 0.0 0.0 971.6444478521432 0.0 971.6444478521432 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1707 - 5 + 1 2.079 58126.1 0.6600000262260437 5264 3578 8826 DOHH2_400M_050219_1,8844 DOHH2_400M_050219_1,8844,AEKRPIKRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8845 50.446 279.0 203370.0 25 0 16196.0 23255 LSVKKYRPKY 10 79 427.92689301992266 1280.758849659968 3 427.9256774783134 MULTI CID FTMS 0 0 0 8826 147465.890625 1.0 0 0.0 19 Unmodified _LSVKKYRPKY_ ENSG00000142871|ENST00000451137|CCN1 1.4819007175156935 0.719781833666733 1 Y 1 9 10.485 0.0 0.0 0.81862 0.0 0.0 1099.68455264024 0.0 1099.68455264024 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.81862 + + 8 + 1 2.079 52027.3 1.0 5265 3578 8826 DOHH2_400M_050219_1,8845 DOHH2_400M_050219_1,8845,LSVKKYRPKY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8846 50.457 559.0 160630.0 25 0 35217.0 + 33088 SESADLIHW 9 126 529.250335319258 1056.486117705316 2 529.2514526247978 MULTI CID FTMS 0 0 0 8826 137107.796875 1.0 0 0.0 20 Unmodified _SESADLIHW_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1 44.40701690623563 0.0526327925666318 1 {[ES]|[DT]|[{I|L}C]}GTD{I|L}{I|L}HW 9 2 + 33.042 0.0 0.0 3.1276 3.1276 74.386 0.0 0.0 0.0 5.417885138426904 4.8502279805328 4.8502279805328 5.642040441009051 0 0.8182503180159344 1.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}GTD{I|L}{I|L}HW;{[ES]|[DT]|[{I|L}C]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L}HW;{[ES]|[DT]|[{I|L}C]}GTD{I|L}{I|L}WH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[MN]{I|L}HW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[MG]|[TS]}G{I|L}HW;{[ES]|[DT]|[{I|L}C]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L}WH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[MN]{I|L}WH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[MN]{I|L}{I|L}HW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[MG]|[TS]}G{I|L}WH;{[ES]|[DT]|[{I|L}C]}GTD{I|L}[WH]{I|L} 3.1276;2.5935;2.5028;2.2665;2.0248;1.9688;1.6417;1.5299;1.4001;1.2979 -;-;-;-;-;-;-;-;-;- 310 + 1 2.079 73358.2 1.0 5266 3578 8826 DOHH2_400M_050219_1,8846 DOHH2_400M_050219_1,8846,SESADLIHW True True SESADLIHW 50.456872 529.251452624798 459750.21875 8826.0 nc|ENSG00000131018|Q8NF91-2|SYNE1;;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;;nc|ENSG00000131018|Q8NF91-4|SYNE1;;ENSG00000131018|ENST00000367255|SYNE1;;nc|ENSG00000131018|Q8NF91-8|SYNE1 5.622927029927571 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8848 50.462 17.0 1971700.0 25 0 127570.0 -1 0 49 881.4126494107194 1760.810745888239 2 881.4141723513603 MULTI CID FTMS 0 0 0 8847 2067586.875 0.0740135871065193 2 -0.2484207153320312 1 1 Y{M(Oxidation (M))|F}ANQQA[CS]VC(Carbamidomethyl (C)){I|L} 12 -1 66.029 0.0 0.0 3.7499 0.0 0.0 358.2195973509181 0.0 358.2195973509181 0.0 60.34231302732586 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.7742275032520141 Y{M(Oxidation (M))|F}ANQQA[CS]VC(Carbamidomethyl (C)){I|L} 3.7499 - 633 + 1 2.072 28769.2 1.0 5267 3579 8847 DOHH2_400M_050219_1,8848 DOHH2_400M_050219_1,8848, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8849 50.466 239.0 346740.0 25 0 49199.0 + 33895 SLFPNSPKW 9 84 538.282064515497 1074.549576097794 2 538.2823364138603 MULTI CID FTMS 0 0 0 8847 258818.421875 0.1446534819717191 2 -0.2484207153320312 2 Unmodified _SLFPNSPKW_ ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF 40.72490554402381 0.0714771638475563 1 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW 9 0 + 81.449 0.0 0.0 7.5798 7.5798 91.991 0.0 0.0 0.0 67.46945795637748 12.403405327429413 12.403405327429413 9.208187539523747 0 0.7134679910804405 2.0 0.6421590589602533 0.4247425010840047 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]SPKW 7.5798;6.7229;6.0475 +;-;- + 394 + 1 2.072 66580.6 1.0 5268 3579 8847 DOHH2_400M_050219_1,8849 DOHH2_400M_050219_1,8849,SLFPNSPKW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8850 50.467 49.0 1317800.0 25 0 156000.0 + 30079 QVDPLSALKY 10 90 567.3134418574953 1132.6123307817904 2 567.3137695193291 MULTI CID FTMS 0 0 0 8847 1105674.375 0.2663842487296794 -1 0.1170272827148437 3 Unmodified _QVDPLSALKY_ ENSG00000128585|ENST00000352689|MKLN1;ENST00000494785.5_1_7:131012658-131163543:+|nuORF;ENST00000497746.1_1_7:131149041-131155790:+|nuORF;ENST00000498778.5_1_7:131151082-131172419:+|nuORF;nc|ENSG00000128585|Q9UL63-2|MKLN1 59.36838082759317 0.0382430275470746 1 {[QV]|[N{I|L}]|[RA]|[KV]}DP{I|L}SA{I|L}KY 10 0 + 75.143 0.0 0.0 6.6345 6.6345 93.732 0.0 0.0 0.0 42.69434213351006 14.146518864155126 14.146518864155126 22.5202495894991 0 0.6505149978319906 2.0 0.0 0.3054621874040891 + + {[QV]|[N{I|L}]|[RA]|[KV]}DP{I|L}SA{I|L}KY;{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}AN[TP]KY;{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}ARA{[NV]|[RG]}Y;{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}AN{I|L}{[NV]|[RG]}Y 6.6345;4.6462;3.7909;3.3105 +;-;-;- + 442 + 1 2.072 58212.9 1.0 5269 3579 8847 DOHH2_400M_050219_1,8850 DOHH2_400M_050219_1,8850,QVDPLSALKY True True QVDPLSALKY 50.467466 567.313769519329 63667980.0 8847.0 ENSG00000128585|ENST00000352689|MKLN1;;ENST00000494785.5_1_7:131012658-131163543:+|nuORF;;ENST00000498778.5_1_7:131151082-131172419:+|nuORF;;nc|ENSG00000128585|Q9UL63-2|MKLN1;;ENST00000497746.1_1_7:131149041-131155790:+|nuORF 8.636239369710287 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8851 50.47 115.0 754290.0 25 0 44977.0 -1 0 79 887.4127581968177 1772.8109634604352 2 887.9150878787041 MULTI CID FTMS 0 0 0 8847 684471.5625 0.6218659820859723 -1 0.1170272827148437 4 1 [KT]EY{M(Oxidation (M))|F}ANQQA[WD]C(Carbamidomethyl (C)){I|L} 14 -1 + 88.938 0.0 0.0 5.0168 5.0168 79.604 0.0 0.0 0.0 3.937840489008792 4.771212547196626 3.937840489008792 4.771212547196626 0 0.7302046884880937 0.0 0.0 1.274227503252014 [KT]EY{M(Oxidation (M))|F}ANQQA[WD]C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQAEM[WQ];[KT]EY{M(Oxidation (M))|F}ANQQA[WD][CG]{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]A[WD]C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AGGQQA[WD]C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]QA[WD]C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]AEM[WQ];[KT]EY{M(Oxidation (M))|F}AN[AG]QAEM[WQ];[KT]EY{M(Oxidation (M))|F}AGGQQAEM[WQ];[KT]EY{M(Oxidation (M))|F}AN[AG][AG]AEM[WQ] 5.0168;4.7476;4.5063;4.5063;4.5063;4.5063;4.2371;4.2371;4.2371;3.7277 -;-;-;-;-;-;-;-;-;- 750 + 1 2.072 63690.2 1.0 5270 3579 8847 DOHH2_400M_050219_1,8851 DOHH2_400M_050219_1,8851, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8852 50.473 129.0 304860.0 25 0 37677.0 + 43452 WTEMNTIVY 9 71 578.7699705066766 1155.525388080153 2 578.7709838747978 MULTI CID FTMS 0 0 0 8847 580546.625 1.0 0 0.0 5 Unmodified _WTEMNTIVY_ ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8 37.97399986684836 0.0865783450051559 1 {[QS]|[NT]}MEWT 6 7 28.945 0.0 0.0 2.5049 0.0 0.0 0.0 390.2009001253281 390.2009001253281 7.262809413564639 0.0 0.0 0.0 0 0.0 0.0 1.424742501084005 0.3807196863200844 {[QS]|[NT]}MEWT 2.5049 - 154 1 2.072 38179.8 1.0 5271 3579 8847 DOHH2_400M_050219_1,8852 DOHH2_400M_050219_1,8852,WTEMNTIVY True True WTEMNTIVY 50.472532 578.770983874798 4113485.25 8847.0 nc|ENSG00000100888|Q9HCK8-2|CHD8;;ENSG00000100888|ENST00000646647|CHD8 5.96013085047404 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8853 50.475 142.0 245920.0 25 0 74439.0 + 30224 QWRKKQVKNNL 11 59 721.4224614894051 1440.8303700456102 2 721.4223510622978 MULTI CID FTMS 0 0 0 8847 426596.3125 1.0 0 0.0 6 Unmodified _QWRKKQVKNNL_ REV__ENSG00000067066|ENST00000340126|SP100;REV__nc|ENSG00000067066|P23497-3|SP100;REV__nc|ENSG00000067066|P23497|SP100 0.3506318815782774 0.8734936314171269 1 D 1 -1 5.4846 0.0 0.0 0.38065 0.0 0.0 803.612243680179 519.1683443658811 1322.78058804606 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.38065 - 1 + 1 2.072 39354.0 1.0 5272 3579 8847 DOHH2_400M_050219_1,8853 DOHH2_400M_050219_1,8853,QWRKKQVKNNL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8854 50.478 128.0 604620.0 25 0 40261.0 + 7738 ELDVRITAL 9 100 515.2996836610937 1028.5848143889873 2 515.3003417849541 MULTI CID FTMS 0 0 0 8847 402820.84375 1.0 0 0.0 7 Unmodified _ELDVRITAL_ ENSG00000047410|ENST00000367478|TPR 34.40172386719151 0.1061884637610825 1 {[QN]|[E{I|L}]|[KN]}DV 4 5 37.307 0.0 0.0 3.627 0.0 0.0 0.0 569.3417279072642 569.3417279072642 18.846682531158923 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.0 + {[QN]|[E{I|L}]|[KN]}DV 3.627 + + 404 + 1 2.072 66744.1 1.0 5273 3579 8847 DOHH2_400M_050219_1,8854 DOHH2_400M_050219_1,8854,ELDVRITAL True True ELDVRITAL 50.478026 515.300341784954 1052898.625 8847.0 ENSG00000047410|ENST00000367478|TPR 5.781567732493083 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8855 50.48 111.0 438860.0 25 0 31729.0 + 9645 FLNQRSIML 9 73 561.309491836384 1120.604430739568 2 561.3095580935478 MULTI CID FTMS 0 0 0 8847 341803.65625 0.8569299006466784 1 -0.124755859375 8 Unmodified _FLNQRSIML_ ENST00000308973.8_1_4:38777424-38777762:-|nuORF;ENST00000506111.1_1_4:38777424-38777628:-|nuORF 34.40172386719151 0.1061884637610825 1 {M(Oxidation (M))|F}{I|L}E 3 7 27.619 0.0 0.0 2.4647 0.0 0.0 713.3961048810562 0.0 713.3961048810562 0.0 4.163865622122671 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}E 2.4647 - 37 1 2.072 43650.8 1.0 5274 3579 8847 DOHH2_400M_050219_1,8855 DOHH2_400M_050219_1,8855,FLNQRSIML True True FLNQRSIML 50.480374 561.309558093548 2807021.25 8847.0 ENST00000506111.1_1_4:38777424-38777628:-|nuORF;;ENST00000308973.8_1_4:38777424-38777762:-|nuORF 5.266270001729329 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8856 50.486 312.0 380780.0 25 0 22476.0 -1 0 87 915.442024762134 1828.869496591068 2 915.9377319216728 MULTI CID FTMS 0 0 0 8847 323260.4375 0.3284048794106631 -3 0.4753341674804687 9 1 [KT]QY{M(Oxidation (M))|F}ADQQAEEVC(Carbamidomethyl (C)){I|L} 15 -1 + 103.04 0.0 0.0 5.6343 5.6343 58.94 0.0 0.0 0.0 75.32882544760909 12.95717853955081 12.95717853955081 0.0 0 0.0 0.0 0.4247425010840047 1.0994850021680094 [KT]QY{M(Oxidation (M))|F}ADQQAEEVC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQAEEVC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ADQQAEEC(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ADQQAEEC(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ADQQAEEV[CG]{I|L};[KT]QY{M(Oxidation (M))|F}ADQQAEEV[CG]{I|L};[KT]KY{M(Oxidation (M))|F}ADQ[AG]AEEVC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ADQ[AG]AEEVC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}AD[AG]QAEEVC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}AD[AG]QAEEVC(Carbamidomethyl (C)){I|L} 5.6343;5.6343;5.4697;5.4697;5.1405;5.1405;5.1405;5.1405;5.1405;5.1405 -;-;-;-;-;-;-;-;-;- 4490 + 1 2.072 85954.5 1.0 5275 3579 8847 DOHH2_400M_050219_1,8856 DOHH2_400M_050219_1,8856, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8857 50.489 133.0 504870.0 25 0 54146.0 537 AEIEALRAEL 10 76 557.8082341938215 1113.6019154544429 2 557.8088256716728 MULTI CID FTMS 0 0 0 8847 255570.828125 1.0 0 0.0 10 Unmodified _AEIEALRAEL_ nc|ENSG00000286102|A0A494C0Y3|FAM246A;nc|ENSG00000286175|A0A494C0N9|FAM246B 26.268140514670165 0.3785003716575977 1 {[QN]|[E{I|L}]|[KN]}A{[QG]|[NA]}E{I|L}{I|L}E{I|L} 10 6 + 59.43 0.0 0.0 5.3367 5.3367 79.419 0.0 0.0 0.0 18.239087409443187 31.99015233922374 18.239087409443187 3.521825181113627 0 0.3054621874040891 1.0969100130080565 0.0 0.0 {[QN]|[E{I|L}]|[KN]}A{[QG]|[NA]}E{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}A[WQ]{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}A{[CP]|[EA]}N{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}A{I|L}[WQ]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}D[RN]{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}QQE{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}D[VG]N{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}A{[QG]|[NA]}E{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}A[WQ]{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}A{[CP]|[EA]}N{I|L}E{I|L}{I|L} 5.3367;5.0205;4.9794;4.7501;4.7501;4.7501;4.7091;4.634;4.3177;4.2766 -;-;-;-;-;-;-;-;-;- 1430 1 2.072 53451.7 1.0 5276 3579 8847 DOHH2_400M_050219_1,8857 DOHH2_400M_050219_1,8857,AEIEALRAEL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8858 50.496 386.0 113860.0 25 0 18063.0 + 42392 VTDSGPTFNYL 11 86 607.2898079542232 1212.5650629752463 2 607.2908203005791 MULTI CID FTMS 0 0 0 8847 249678.09375 0.3451599792533325 1 -0.124755859375 11 Unmodified _VTDSGPTFNYL_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 17.11289562659939 0.6791789249425932 1 [YN][KS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}D[RH] 9 9 + 29.376 0.0 0.0 2.4226 2.4226 79.896 0.0 0.0 0.0 9.427346590861138 1.3828054141497894 1.3828054141497894 15.740312677277188 0 0.0 1.6989700043360187 0.3054621874040891 0.0 [YN][KS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}D[RH];[YN][KS]{M(Oxidation (M))|F}[YV][RH];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[TP][TP]ED[RH];{[MG]|[TS]}[RD][TP]ED[RH] 2.4226;1.1245;0.60871;0.14336 -;-;-;- 124 1 2.072 37096.3 1.0 5277 3579 8847 DOHH2_400M_050219_1,8858 DOHH2_400M_050219_1,8858,VTDSGPTFNYL False True VTDSGPTFNYL 50.495741 607.290820300579 10053807.0 8847.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 4.354701121648152 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8859 50.504 441.0 282170.0 25 0 24969.0 -1 0 84 930.4494944225636 1858.8844359119269 2 930.9516479372978 MULTI CID FTMS 0 0 0 8847 215484.25 1.0 0 0.0 12 1 [KT]EY{M(Oxidation (M))|F}ANQQAED{[CT]|[{M(Oxidation (M))|F}G]}V{I|L} 16 -1 + 98.648 0.0 0.0 5.3068 5.3068 83.38 0.0 0.0 0.0 71.99269106973176 5.999786298350713 5.999786298350713 8.104480533390301 0 1.1549471895720984 0.0 0.4247425010840047 1.1861818737241734 [KT]EY{M(Oxidation (M))|F}ANQQAED{[CT]|[{M(Oxidation (M))|F}G]}V{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[RP]W{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AGGQQAED{[CT]|[{M(Oxidation (M))|F}G]}V{I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]QAED{[CT]|[{M(Oxidation (M))|F}G]}V{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]AED{[CT]|[{M(Oxidation (M))|F}G]}V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQAE[HV]A[HS];[KT]EY{M(Oxidation (M))|F}ANQQ[MD]{I|L}VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQA[VG][KC]C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQ[RP]W{M(Oxidation (M))|F}[CG]{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[RP]{[DA]|[EG]}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 5.3068;4.8709;4.8219;4.8219;4.8219;4.5548;4.5195;4.4883;4.384;4.384 -;-;-;-;-;-;-;-;-;- 4758 + 1 2.072 84207.6 1.0 5278 3579 8847 DOHH2_400M_050219_1,8859 DOHH2_400M_050219_1,8859, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8860 50.514 602.0 174460.0 25 0 12681.0 -1 0 95 951.460891663151 1900.9072303931016 2 951.9620849490166 MULTI CID FTMS 0 0 0 8847 188210.203125 1.0 0 0.0 13 1 {[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 113.49 0.0 0.0 5.9703 5.9703 60.225 0.0 0.0 0.0 1.249387366082999 1.249387366082999 1.249387366082999 0.0 0 0.6989700043360187 1.6989700043360187 0.0 1.1989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQNA{M(Oxidation (M))|F}YKV{I|L};MVKY{M(Oxidation (M))|F}ANQQAE[NS]VC(Carbamidomethyl (C)){I|L};MVKY{M(Oxidation (M))|F}ANQQAP{[QG]|[NA]}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQ[AG]NA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EA[AG]QNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQGGA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L} 5.9703;5.9703;5.9046;5.7463;5.4962;5.4962;5.4962;5.4962;5.4962;5.4962 -;-;-;-;-;-;-;-;-;- 2781 1 2.072 74355.7 1.0 5279 3579 8847 DOHH2_400M_050219_1,8860 DOHH2_400M_050219_1,8860, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8861 50.519 264.0 509880.0 25 0 42071.0 + 6916 EEFIGKIGI 9 107 503.28446956647406 1004.554386199748 2 503.2848998904228 MULTI CID FTMS 0 0 0 8847 182217.703125 0.4801246124439199 -1 0.1170272827148437 14 Unmodified _EEFIGKIGI_ ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071|PRDM15 57.47134341890925 0.0274820932774257 1 EE{M(Oxidation (M))|F}{I|L}GK{I|L}G{I|L} 9 0 + 47.388 0.0 0.0 4.7173 4.7173 85.439 0.0 0.0 0.0 24.424619522204047 7.695185832029274 7.695185832029274 12.730012720637369 0 0.6989700043360187 1.3979400086720375 0.0 0.0 + + EE{M(Oxidation (M))|F}{I|L}GK{I|L}G{I|L};EE{M(Oxidation (M))|F}{I|L}{I|L}[KG]G{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}{I|L}{M(Oxidation (M))|F}[HC] 4.7173;3.4501;2.9252 +;-;- + 276 + 1 2.072 105164.3 1.0 5280 3579 8847 DOHH2_400M_050219_1,8861 DOHH2_400M_050219_1,8861,EEFIGKIGI True True EEFIGKIGI 50.519024 503.284899890423 2010334.125 8847.0 nc|ENSG00000141956|P57071-3|PRDM15;;nc|ENSG00000141956|P57071-2|PRDM15;;nc|ENSG00000141956|P57071|PRDM15;;ENSG00000141956|ENST00000398548|PRDM15 2.758652647336324 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8862 50.533 800.0 96120.0 25 0 20849.0 + 16416 IYVIKLAWKWR 11 108 738.4484972166904 1474.882441500181 2 738.4492065310478 MULTI CID FTMS 0 0 0 8847 176144.84375 1.0 0 0.0 15 Unmodified _IYVIKLAWKWR_ REV__ENST00000489656.5_1_10:70917876-70917945:+|nuORF 0.3506318815782774 0.8734936314171269 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{M(Oxidation (M))|F} 4 -1 20.49 0.0 0.0 1.3892 0.0 0.0 0.0 951.6792914359806 951.6792914359806 16.510234424404686 0.0 0.0 0.0 0 0.0 0.0 0.5796896906561032 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{M(Oxidation (M))|F} 1.3892 - 26 1 2.072 67999.6 0.6800000071525574 5281 3579 8847 DOHH2_400M_050219_1,8862 DOHH2_400M_050219_1,8862,IYVIKLAWKWR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8863 50.548 800.0 124120.0 25 0 8849.7 + 5519 DMALKSLSL 9 147 489.2713761318292 976.5281993304584 2 489.2703124880791 MULTI CID FTMS 0 0 0 8847 170534.09375 1.0 0 0.0 16 Unmodified _DMALKSLSL_ ENSG00000135763|ENST00000258243|URB2 27.628801355627647 0.1796483985696185 1 [MD]A{I|L} 4 5 45.445 0.0 0.0 4.6538 0.0 0.0 0.0 543.3170333996638 543.3170333996638 31.95046257204389 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + [MD]A{I|L} 4.6538 + + 168 + 1 2.072 79080.0 0.5899999737739563 5282 3579 8847 DOHH2_400M_050219_1,8863 DOHH2_400M_050219_1,8863,DMALKSLSL False True DMALKSLSL 50.548153 489.270312488079 1003476.625 8847.0 ENSG00000135763|ENST00000258243|URB2 4.9215749104817705 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8864 50.552 220.0 314470.0 25 0 32901.0 + 44246 YLIYSDIDVCD 11 82 659.7998581466163 0 659.7994262576103 PEAK CID FTMS 0 0 0 8847 165356.140625 0.8490989370049016 -1 0.1170272827148437 17 Unmodified _YLIYSDIDVCD_ REV__ENSG00000159267|ENST00000674895|HLCS;REV__nc|ENSG00000159267|P50747|HLCS 18.1463463914782 0.3750318954284983 1 {I|L}{M(Oxidation (M))|F}D 3 -1 20.177 0.0 0.0 1.5314 0.0 0.0 163.07193201413253 776.3210543268186 939.3929863409512 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 {I|L}{M(Oxidation (M))|F}D 1.5314 - 65 + 1 2.072 56403.3 1.0 5283 3579 8847 DOHH2_400M_050219_1,8864 DOHH2_400M_050219_1,8864,YLIYSDIDVCD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8865 50.566 800.0 42776.0 25 0 1896.8 -1 0 72 890.457150587715 2668.3496223633447 3 890.7917968630791 MULTI CID FTMS 0 0 0 8847 160615.3125 1.0 0 0.0 18 1 [{I|L}P]SV 4 -1 31.691 0.0 0.0 1.1877 0.0 0.0 0.0 2269.089434945629 2269.089434945629 4.428075465411574 0.0 0.0 0.0 0 0.0 2.0 0.75 0.0 [{I|L}P]SV 1.1877 - 383 1 2.072 32261.7 0.5899999737739563 5284 3579 8847 DOHH2_400M_050219_1,8865 DOHH2_400M_050219_1,8865, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8866 50.573 300.0 692010.0 25 0 81405.0 43200 VYYPIIFSQ 9 102 565.2995595375598 1128.5845661419196 2 565.3011352419853 MULTI CID FTMS 0 0 0 8847 158280.578125 1.0 0 0.0 19 Unmodified _VYYPIIFSQ_ ENSG00000198108|ENST00000305031|CHSY3 29.081581746732265 0.1611639662936252 1 VYYP[{M(Oxidation (M))|F}V]KP 8 4 48.013 0.0 0.0 4.2543 0.0 0.0 0.0 132.04590784244377 132.04590784244377 33.40874491738596 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 1.610924374808178 VYYP[{M(Oxidation (M))|F}V]KP 4.2543 - 173 + 1 2.072 163772.3 1.0 5285 3579 8847 DOHH2_400M_050219_1,8866 DOHH2_400M_050219_1,8866,VYYPIIFSQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8867 50.582 496.0 274090.0 25 0 22233.0 -1 0 101 1037.0132130629631 2072.0118731927264 2 1037.012499988079 MULTI CID FTMS 0 0 0 8847 121867.46875 0.6140304069328631 -1 0.1170272827148437 20 1 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NMPN{I|L}NADQ[HK][WH]Q 17 -1 + 120.27 0.0 0.0 5.8047 5.8047 88.651 0.0 0.0 0.0 99.30455793759366 2.9242982390206294 2.9242982390206294 10.221260677816788 0 2.0669015600442577 1.6989700043360187 0.3494850021680094 1.1861818737241734 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NMPN{I|L}NADQ[HK][WH]Q;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NMPN{I|L}NWQ[HK][WH]Q 5.8047;5.3114 -;- 7318 + 1 2.072 93873.7 1.0 5286 3579 8847 DOHH2_400M_050219_1,8867 DOHH2_400M_050219_1,8867, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8869 50.588 184.0 317140.0 25 0 46277.0 30803 RIGRKWQRWR 10 72 481.2835363631703 1440.828779689711 3 481.2834350466728 MULTI CID FTMS 0 0 0 8868 299238.46875 1.0 0 0.0 1 Unmodified _RIGRKWQRWR_ ENST00000357156.6_1_20:33104228-33114094:+|nuORF 0.4007161486938917 0.7247829448918255 1 {I|L} 1 9 11.594 0.0 0.0 0.80466 0.0 0.0 1309.7339138223265 0.0 1309.7339138223265 0.0 4.515449934959719 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.80466 + + 21 + 1 2.072 58565.2 1.0 5287 3580 8868 DOHH2_400M_050219_1,8869 DOHH2_400M_050219_1,8869,RIGRKWQRWR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8870 50.597 526.0 149930.0 25 0 16836.0 33668 SIVMILVDTV 10 110 545.3160496178531 0 545.3173095583916 PEAK CID FTMS 0 0 0 8868 104532.2421875 0.8308227470154467 1 -0.1236648559570312 2 Unmodified _SIVMILVDTV_ ENSG00000015520|ENST00000381160|NPC1L1;nc|ENSG00000015520|Q9UHC9-2|NPC1L1;nc|ENSG00000015520|Q9UHC9-4|NPC1L1;nc|ENSG00000015520|Q9UHC9|NPC1L1 3.5964929083625545 0.3961065659209837 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.072 65147.7 1.0 5288 3580 8868 DOHH2_400M_050219_1,8870 DOHH2_400M_050219_1,8870,SIVMILVDTV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8871 50.599 73.0 882810.0 25 0 84757.0 + 573 AEINNIIKI 9 84 514.3109483230637 1026.607343712927 2 514.3111450076103 MULTI CID FTMS 0 0 0 8868 601633.375 0.1544759662749606 -1 0.124755859375 3 Unmodified _AEINNIIKI_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;ENST00000491510.1_1_3:25668659-25671642:-|nuORF;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 53.832793166522166 0.0319663582346103 1 {[CP]|[EA]}{I|L}NN{I|L}{I|L}K{I|L} 9 0 + 59.563 0.0 0.0 5.8019 5.8019 87.321 0.0 0.0 0.0 16.810771249906225 13.46787486224656 13.46787486224656 9.208187539523747 0 1.424742501084005 0.0 0.0 0.2742275032520141 + + {[CP]|[EA]}{I|L}NN{I|L}{I|L}K{I|L};{[CP]|[EA]}{I|L}NGG{I|L}{I|L}K{I|L};{[CP]|[EA]}{I|L}GGN{I|L}{I|L}K{I|L};{[CP]|[EA]}{I|L}GGGG{I|L}{I|L}K{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}N{I|L}[RN][RK];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N[RN][RK];{[QV]|[N{I|L}]|[RA]|[KV]}GG{I|L}[RN][RK];{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}[RN][RK];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GG[RN][RK];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[CA]|SS}[{I|L}P][RK] 5.8019;4.9049;4.9049;4.0122;2.7019;2.2371;1.7997;1.6832;1.3349;0.0067589 +;-;-;-;-;-;-;-;-;- + 193 + 1 2.072 54437.3 1.0 5289 3580 8868 DOHH2_400M_050219_1,8871 DOHH2_400M_050219_1,8871,AEINNIIKI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8872 50.602 154.0 399820.0 25 0 46482.0 + 2526 ASDMLQLEY 9 84 535.2470396083454 1068.4795262834907 2 535.2474853396416 MULTI CID FTMS 0 0 0 8868 264042.40625 0.8196404482697675 1 -0.1236648559570312 4 Unmodified _ASDMLQLEY_ ENSG00000120696|ENST00000379483|KBTBD7;ENSG00000165572|ENST00000379485|KBTBD6 14.838274106304384 0.4350285940865338 1 {I|L}{I|L}{M(Oxidation (M))|F}{[QG]|[NA]}{M(Oxidation (M))|F}Y 7 6 27.211 0.0 0.0 2.5467 0.0 0.0 182.00871437118445 0.0 182.00871437118445 0.0 -7.313856900900149 -7.313856900900149 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F}{[QG]|[NA]}{M(Oxidation (M))|F}Y 2.5467 - 235 + 1 2.072 52966.7 1.0 5290 3580 8868 DOHH2_400M_050219_1,8872 DOHH2_400M_050219_1,8872,ASDMLQLEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8873 50.609 421.0 152300.0 25 0 25215.0 + 30221 QWLGRPPPALA 11 89 603.340946475294 1204.667340017388 2 603.3406249880791 MULTI CID FTMS 0 0 0 8868 159943.046875 1.0 0 0.0 5 Unmodified _QWLGRPPPALA_ REV__ENSG00000266524|ENST00000580279|GDF10 1.4819007175156935 0.86815623132643 1 Y 1 -1 11.594 0.0 0.0 0.96241 0.0 0.0 1023.5932566207068 0.0 1023.5932566207068 0.0 8.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.96241 - 6 + 1 2.072 51043.8 1.0 5291 3580 8868 DOHH2_400M_050219_1,8873 DOHH2_400M_050219_1,8873,QWLGRPPPALA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8874 50.623 800.0 179730.0 25 0 13921.0 -1 0 107 921.4440779249126 1840.873602916625 2 921.946337878704 MULTI CID FTMS 0 0 0 8868 154882.453125 1.0 0 0.0 6 1 [KT]EY{M(Oxidation (M))|F}ANQ[HV]{[QG]|[NA]}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 15 -1 + 67.56 0.0 0.0 3.67 3.67 70.347 0.0 0.0 0.0 44.02758118237223 4.102445143395826 4.102445143395826 1.0720996964786875 0 0.0 0.0 0.5 1.174742501084005 [KT]EY{M(Oxidation (M))|F}ANQ[HV]{[QG]|[NA]}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQ{[CP]|[EA]}D{[DA]|[EG]}V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQ[WE]{[DA]|[EG]}V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQ{[CP]|[EA]}T{[{M(Oxidation (M))|F}H]|[RQ]}Q;[KT]EY{M(Oxidation (M))|F}ANQQ[WE][RN]Q;[KT]EY{M(Oxidation (M))|F}ANQ[HV][YQ]WQ;[KT]EY{M(Oxidation (M))|F}ANQQ{[DS]|[MA]|[CV]|TT}{[WT]|[RM]}[HS] 3.67;3.6117;3.2473;3.1389;2.6798;2.6119;2.5557 -;-;-;-;-;-;- 881 + 1 2.072 96704.0 0.6700000166893005 5292 3580 8868 DOHH2_400M_050219_1,8874 DOHH2_400M_050219_1,8874, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8875 50.636 773.0 92859.0 25 0 17595.0 19194 LEFRYKKRVYK 11 112 510.634268353793 1528.880975661579 3 510.6345397830009 MULTI CID FTMS 0 0 0 8868 119465.2109375 1.0 0 0.0 7 Unmodified _LEFRYKKRVYK_ ENSG00000162105|ENST00000601538|SHANK2 1.3296431237094175 0.8688745925763601 1 V{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TW{I|L} 7 10 13.433 0.0 0.0 0.87863 0.0 0.0 639.3800734172415 0.0 639.3800734172415 0.0 2.3240257930697084 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TW{I|L} 0.87863 - 86 + 1 2.072 71088.2 1.0 5293 3580 8868 DOHH2_400M_050219_1,8875 DOHH2_400M_050219_1,8875,LEFRYKKRVYK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8876 50.65 800.0 124910.0 25 0 10922.0 19567 LFSFHNLL 8 140 495.7762389382588 0 495.7755920290947 PEAK CID FTMS 0 0 0 8868 101572.1015625 1.0 0 0.0 8 Unmodified _LFSFHNLL_ ENST00000570308.5_1_16:55539636-55539948:+|nuORF 20.871210003555333 0.4015059659087983 1 {I|L}{M(Oxidation (M))|F} 2 6 4.6927 0.0 0.0 0.47424 0.0 0.0 149.10431983033556 577.2512768079476 726.3555966382833 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}{M(Oxidation (M))|F} 0.47424 + + 40 + 1 2.072 79256.4 0.4600000083446502 5294 3580 8868 DOHH2_400M_050219_1,8876 DOHH2_400M_050219_1,8876,LFSFHNLL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8877 50.664 800.0 55538.0 25 0 14994.0 + 19375 LERFKRLRQER 11 76 765.9509257930636 0 765.9505493044853 PEAK CID FTMS 0 0 0 8868 97775.0078125 1.0 0 0.0 9 Unmodified _LERFKRLRQER_ REV__ENSG00000117614|ENST00000236273|SYF2;REV__ENST00000476231.1_1_1:25558504-25558958:-|nuORF;REV__nc|ENSG00000117614|O95926-2|SYF2 0.3506318815782774 0.47618401536486 1 D 1 -1 0.71334 0.0 0.0 0.046627 0.0 0.0 1286.7655315404254 125.0723818414672 1411.8379133818926 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.046627 - 1 + 1 2.072 43611.9 0.5299999713897705 5295 3580 8868 DOHH2_400M_050219_1,8877 DOHH2_400M_050219_1,8877,LERFKRLRQER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8878 50.674 468.0 211070.0 25 0 10494.0 + -1 YQWRWTNTFLC 11 108 787.8636052378436 1573.712657542487 2 787.8901244997978 MULTI CID FTMS 0 0 0 -1 0 10 Carbamidomethyl (C) _YQWRWTNTFLC(Carbamidomethyl (C))_ REV__ENST00000374866.7_1_2:189968999-189975048:-|nuORF 3.2813086475875832 0.8596665074481906 1 QY{M(Oxidation (M))|F}ANQQDMAE 11 -1 56.886 0.0 0.0 3.6148 0.0 0.0 230.1567486476993 0.0 230.1567486476993 0.0 9.819856852465882 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.7742275032520141 QY{M(Oxidation (M))|F}ANQQDMAE 3.6148 - 1249 + 1 2.072 74599.1 1.0 5296 3580 8868 DOHH2_400M_050219_1,8878 DOHH2_400M_050219_1,8878,YQWRWTNTFLC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8879 50.684 562.0 158640.0 25 0 20713.0 + 10329 FSEEHYIFY 9 114 617.7749247369693 1233.5352965407385 2 617.7756225466728 MULTI CID FTMS 0 0 0 8868 86954.1640625 0.8461414661685058 -1 0.124755859375 11 Unmodified _FSEEHYIFY_ ENSG00000145715|ENST00000274376|RASA1;nc|ENSG00000145715|P20936-2|RASA1;nc|ENSG00000145715|P20936-4|RASA1 48.345845343767074 0.0439967357579942 1 {[YC]|[HE]}EYAY{I|L}{M(Oxidation (M))|F}Y 9 4 + 51.476 0.0 0.0 4.173 4.173 53.735 0.0 0.0 0.0 0.0 9.436974992327125 0.0 0.0 0 0.5 0.0 0.7302046884880937 0.0 {[YC]|[HE]}EYAY{I|L}{M(Oxidation (M))|F}Y;{[WN]|[YH]}EEAY{I|L}{M(Oxidation (M))|F}Y;{[YC]|[HE]}YEAY{I|L}{M(Oxidation (M))|F}Y;{[WN]|[YH]}EES{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Y;{[YC]|[HE]}EYS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Y;{[YC]|[HE]}YES{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Y;{[WN]|[YH]}EE{I|L}S{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;{[YC]|[HE]}EY{I|L}S{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;{[YC]|[HE]}EYS{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;{[WN]|[YH]}EES{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 4.173;4.173;3.8504;3.6849;3.6849;3.3623;3.1161;3.1161;3.0148;3.0148 -;-;-;-;-;-;-;-;-;- 672 1 2.072 69631.0 1.0 5297 3580 8868 DOHH2_400M_050219_1,8879 DOHH2_400M_050219_1,8879,FSEEHYIFY True True FSEEHYIFY 50.683779 617.775622546673 560838.4375 8868.0 nc|ENSG00000145715|P20936-2|RASA1;;ENSG00000145715|ENST00000274376|RASA1;;nc|ENSG00000145715|P20936-4|RASA1 6.804123401641846 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8880 50.691 428.0 554170.0 25 0 175840.0 + -1 AEINNIIKI 9 105 1027.005910405745 2051.99726787829 2 1027.508227527142 MULTI CID FTMS 0 0 0 8868 138737.703125 1.0 0 0.0 12 nc|ENSG00000131747|P11388-4|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;ENST00000491510.1_1_3:25668659-25671642:-|nuORF;nc|ENSG00000131747|P11388-2|TOP2A;ENSG00000077097|ENST00000264331|TOP2B 1 {[QV]|[N{I|L}]|[RA]|[KV]}NAE{I|L}{I|L}K[DP]C 11 -1 52.088 0.0 0.0 2.5384 0.0 0.0 0.0 838.4050596723386 838.4050596723386 35.54554487703232 0.0 0.0 0.0 0 0.5 0.0 0.25 1.816901560044258 {[QV]|[N{I|L}]|[RA]|[KV]}NAE{I|L}{I|L}K[DP]C 2.5384 - 3950 1 2.072 156257.2 1.0 5298 3580 8868 DOHH2_400M_050219_1,8880 DOHH2_400M_050219_1,8880, False False AEINNIIKI 50.69144 1027.50822752714 43725714.25 8868.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;ENSG00000131747|ENST00000423485|TOP2A;;ENST00000491510.1_1_3:25668659-25671642:-|nuORF;;nc|ENSG00000131747|P11388-2|TOP2A;;ENSG00000077097|ENST00000264331|TOP2B 6.015262603759766 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8881 50.705 800.0 94688.0 25 0 14696.0 + -1 GTEFTTVLY 9 105 1029.8307320796832 3086.47036683925 3 1030.502734363079 MULTI CID FTMS 0 0 0 8868 118322.078125 0.0575032875670946 -4 0.6000900268554688 13 nc|ENSG00000073282|Q9H3D4-8|TP63;nc|ENSG00000073282|Q9H3D4-2|TP63;nc|ENSG00000073282|Q9H3D4-7|TP63;nc|ENSG00000073282|Q9H3D4-6|TP63;nc|ENSG00000073282|Q9H3D4-11|TP63;nc|ENSG00000073282|Q9H3D4-4|TP63;nc|ENSG00000073282|Q9H3D4-12|TP63;nc|ENSG00000073282|Q9H3D4-5|TP63;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;nc|ENSG00000073282|Q9H3D4-9|TP63;nc|ENSG00000073282|Q9H3D4-10|TP63;ENSG00000073282|ENST00000264731|TP63;nc|ENSG00000073282|Q9H3D4-3|TP63 1 Y{I|L}VTG 5 -1 33.047 0.0 0.0 1.0707 0.0 0.0 2092.977338130069 457.17316614322505 2550.150504273294 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 Y{I|L}VTG 1.0707 - 2778 + 1 2.072 54803.6 0.5600000023841858 5299 3580 8868 DOHH2_400M_050219_1,8881 DOHH2_400M_050219_1,8881, False False GTEFTTVLY 50.705304 1030.50273436308 468711.8125 8868.0 nc|ENSG00000073282|Q9H3D4-8|TP63;;nc|ENSG00000073282|Q9H3D4-2|TP63;;nc|ENSG00000073282|Q9H3D4-7|TP63;;nc|ENSG00000073282|Q9H3D4-6|TP63;;nc|ENSG00000073282|Q9H3D4-11|TP63;;nc|ENSG00000073282|Q9H3D4-4|TP63;;nc|ENSG00000073282|Q9H3D4-12|TP63;;nc|ENSG00000073282|Q9H3D4-5|TP63;;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;;nc|ENSG00000073282|Q9H3D4-9|TP63;;nc|ENSG00000073282|Q9H3D4-10|TP63;;ENSG00000073282|ENST00000264731|TP63;;nc|ENSG00000073282|Q9H3D4-3|TP63 1.2891319195429485 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8883 50.711 56.0 1165000.0 25 0 221550.0 + 31629 RRFFPYYVY 9 49 655.8375829388302 1309.6606129444604 2 655.8380615115166 MULTI CID FTMS 0 0 0 8882 778769.1875 0.3289574186465578 2 -0.293670654296875 1 Unmodified _RRFFPYYVY_ ENSG00000008018|ENST00000262193|PSMB1 36.04419817259434 0.0971720506436186 1 YVY 3 6 30.93 0.0 0.0 2.3617 0.0 0.0 866.4553534581295 0.0 866.4553534581295 0.0 22.971062485323515 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + YVY 2.3617 + + 15 1 2.075 53611.2 1.0 5300 3581 8882 DOHH2_400M_050219_1,8883 DOHH2_400M_050219_1,8883,RRFFPYYVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8884 50.712 76.0 593520.0 25 0 41130.0 + 13793 HTDDPLTWDY 10 61 631.7696856833676 1261.524818433535 2 631.7699462771416 MULTI CID FTMS 0 0 0 8882 479591.875 0.0481404700681355 3 -0.4164390563964844 2 Unmodified _HTDDPLTWDY_ ENSG00000108651|ENST00000261708|UTP6;ENST00000583408.5_1_17:30207568-30228646:-|nuORF 69.10491478415734 0.0189654488676922 1 [HT]DDP{I|L}TWDY 10 0 + 69.435 0.0 0.0 5.504 5.504 75.194 0.0 0.0 0.0 0.0269751594335332 16.19833987874749 0.0269751594335332 0.0269751594335332 0 1.2302046884880935 0.0 1.1549471895720984 0.0 + + [HT]DDP{I|L}TWDY;[WD]TY{I|L}TWDY;{[WT]|[RM]}DY{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TWDY;{[WS]|[C(Carbamidomethyl (C)){I|L}]}EY{I|L}TWDY;{[WT]|[RM]}DY{I|L}TEGDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TEGDY;{[WT]|[RM]}DY{I|L}T[DG]EY;[HT]DDP{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}EY;[WD]TY{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}EY 5.504;5.5019;4.6102;4.3532;4.2947;4.1325;3.8756;3.8621;3.8383;3.8362 +;-;-;-;-;-;-;-;-;- + 636 1 2.075 39265.7 1.0 5301 3581 8882 DOHH2_400M_050219_1,8884 DOHH2_400M_050219_1,8884,HTDDPLTWDY True True HTDDPLTWDY 50.712379 631.769946277142 266820984.0 8882.0 ENST00000583408.5_1_17:30207568-30228646:-|nuORF;;ENSG00000108651|ENST00000261708|UTP6 8.742600123087565 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8885 50.714 89.0 760910.0 25 0 87316.0 + 31631 RRFFPYYVY 9 58 437.5609506352158 1309.6610225058475 3 437.5608398318291 MULTI CID FTMS 0 0 0 8882 534693.25 0.3596588142073415 2 -0.293670654296875 3 Unmodified _RRFFPYYVY_ ENSG00000008018|ENST00000262193|PSMB1 28.486842064014134 0.1687311288560894 1 YVY 3 6 28.232 0.0 0.0 2.1557 0.0 0.0 866.4551236433091 0.0 866.4551236433091 0.0 12.034021960761262 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + YVY 2.1557 + + 23 1 2.075 58902.8 1.0 5302 3581 8882 DOHH2_400M_050219_1,8885 DOHH2_400M_050219_1,8885,RRFFPYYVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8886 50.716 91.0 647090.0 25 0 41364.0 + 6941 EEGPDVLRW 9 79 550.772878940904 1099.531204948608 2 550.7736083865166 MULTI CID FTMS 0 0 0 8882 465625.3125 1.0 0 0.0 4 Unmodified _EEGPDVLRW_ ENSG00000100934|ENST00000307712|SEC23A;ENSG00000101310|ENST00000650089|SEC23B;nc|ENSG00000100934|Q15436-2|SEC23A 32.78568957990786 0.1150597335874693 1 EEGPDV{I|L}RW 9 0 + 69.416 0.0 0.0 6.3132 6.3132 92.374 0.0 0.0 0.0 50.22076092508589 12.252684618815088 12.252684618815088 18.50237679666668 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + + EEGPDV{I|L}RW;[MT]K{I|L}VDPG[HC];EEGPDV[WR]{I|L} 6.3132;4.6305;4.4118 +;-;- + 130 + 1 2.075 49871.5 1.0 5303 3581 8882 DOHH2_400M_050219_1,8886 DOHH2_400M_050219_1,8886,EEGPDVLRW True True EEGPDVLRW 50.716358 550.773608386517 2467701.25 8882.0 nc|ENSG00000100934|Q15436-2|SEC23A;;ENSG00000100934|ENST00000307712|SEC23A;;ENSG00000101310|ENST00000650089|SEC23B 8.277851422627768 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8887 50.719 123.0 338820.0 25 0 40960.0 + 45506 YTSDYFISY 9 72 579.753072096793 1157.4915912603858 2 579.7527343630791 MULTI CID FTMS 0 0 0 8882 285817.28125 0.0433094940323489 -2 0.2484207153320312 5 Unmodified _YTSDYFISY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 42.09456458481378 0.0639583784996157 1 {[YD]|[{M(Oxidation (M))|F}M]}ST{M(Oxidation (M))|F}Y 6 5 43.351 0.0 0.0 3.7453 0.0 0.0 0.0 378.1685681493108 378.1685681493108 17.153500133247732 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.174742501084005 0.0 {[YD]|[{M(Oxidation (M))|F}M]}ST{M(Oxidation (M))|F}Y 3.7453 - 245 1 2.075 38422.9 1.0 5304 3581 8882 DOHH2_400M_050219_1,8887 DOHH2_400M_050219_1,8887,YTSDYFISY True True YTSDYFISY 50.718902 579.752734363079 152792376.0 8882.0 ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;nc|ENSG00000134954|P14921-2|ETS1;;nc|ENSG00000134954|P14921-5|ETS1 5.166262149810791 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8888 50.724 257.0 298480.0 25 0 30154.0 + 24322 MEEPISLHTW 10 96 621.7945133173906 1241.5744737015812 2 621.7946655154228 MULTI CID FTMS 0 0 0 8882 247085.671875 1.0 0 0.0 6 Unmodified _MEEPISLHTW_ ENST00000318410.11_1_8:126096196-126103965:-|nuORF 99.79894945604345 0.0086314121850342 1 MEEP{I|L}S{I|L}HTW 10 0 + 102.16 0.0 0.0 8.2282 8.2282 97.57 0.0 0.0 0.0 65.25932949642589 10.0 10.0 33.69448070049671 0 0.9247425010840048 1.6989700043360187 2.079689690656103 0.0 + + MEEP{I|L}S{I|L}HTW;MEEP{I|L}{[{M(Oxidation (M))|F}C]|[YS]}VK{M(Oxidation (M))|F};MEEP{I|L}[WY]K{M(Oxidation (M))|F};MEEP[HA][{I|L}P][YR];MEEPP{[YC]|[HE]}VK{M(Oxidation (M))|F};M{M(Oxidation (M))|F}[HA]{I|L}S{I|L}HTW;ME{M(Oxidation (M))|F}[VS]T[{I|L}P][YR];ME{M(Oxidation (M))|F}{[DA]|[EG]}T[{I|L}P][YR];MEEWHHVK{M(Oxidation (M))|F};ME{M(Oxidation (M))|F}[VS][{I|L}P]T[YR] 8.2282;5.5144;5.0202;4.9053;4.7228;4.3449;4.0999;4.0999;3.6589;3.6149 +;-;-;-;-;-;-;-;-;- + 1029 + 1 2.075 59477.8 1.0 5305 3581 8882 DOHH2_400M_050219_1,8888 DOHH2_400M_050219_1,8888,MEEPISLHTW True True MEEPISLHTW 50.723681 621.794665515423 1472427.5 8882.0 ENST00000318410.11_1_8:126096196-126103965:-|nuORF 7.900864601135254 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8889 50.729 282.0 226280.0 25 0 24661.0 + 32162 RVSDINFTL 9 76 532.7901315096067 0 532.7906371951103 PEAK CID FTMS 0 0 0 8882 222484.015625 1.0 0 0.0 7 Unmodified _RVSDINFTL_ ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3 24.99096001346401 0.1558265925128033 1 T{M(Oxidation (M))|F}N{I|L}{I|L} 5 7 34.865 0.0 0.0 3.2781 0.0 0.0 131.0930671190195 341.1250094049438 472.2180765239633 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3494850021680094 0.0 T{M(Oxidation (M))|F}N{I|L}{I|L} 3.2781 - 109 + 1 2.075 52489.0 1.0 5306 3581 8882 DOHH2_400M_050219_1,8889 DOHH2_400M_050219_1,8889,RVSDINFTL False True RVSDINFTL 50.728887 532.79063719511 1382232.75 8882.0 nc|ENSG00000110075|Q5H9R7-6|PPP6R3;;ENSG00000110075|ENST00000393800|PPP6R3;;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;;nc|ENSG00000110075|Q5H9R7-3|PPP6R3;;nc|ENSG00000110075|Q5H9R7-5|PPP6R3 3.690583308537801 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8890 50.735 327.0 411050.0 25 0 74598.0 9068 FFCRGDLS 8 130 472.7172552706193 943.4199576080388 2 472.7177307009697 MULTI CID FTMS 0 0 0 8882 211017.671875 0.4710614136742029 -1 0.1236648559570312 8 Unmodified _FFCRGDLS_ L1MC3_dup7320|chrX:70161794-70162664:+|1.112392509996284|0.2551508396873335|2.12|48.0|62|3|anti-sense 5.760428011301431 0.7893668129297577 1 [W{M(Oxidation (M))|F}]R 3 6 18.468 0.0 0.0 1.9575 0.0 0.0 0.0 451.1626070611938 451.1626070611938 9.198515040637757 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [W{M(Oxidation (M))|F}]R 1.9575 - 36 + 1 2.075 106745.3 1.0 5307 3581 8882 DOHH2_400M_050219_1,8890 DOHH2_400M_050219_1,8890,FFCRGDLS False False False False ERV PXD020620_cell_line DOHH2_400M_050219_1 8891 50.74 274.0 280390.0 25 0 36936.0 + 10355 FSKDWSFY 8 110 540.2449610986231 1078.475369264046 2 540.2454101443291 MULTI CID FTMS 0 0 0 8882 205860.953125 1.0 0 0.0 9 Unmodified _FSKDWSFY_ ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF 53.832793166522166 0.1212192986213991 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QP]G{M(Oxidation (M))|F}S{M(Oxidation (M))|F}Y 9 4 + 56.767 0.0 0.0 5.2636 5.2636 86.864 0.0 0.0 0.0 11.13885281793209 14.97302484056646 11.13885281793209 11.13885281793209 0 1.5 1.5228787452803376 0.9247425010840048 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QP]G{M(Oxidation (M))|F}S{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}[YN]WS{M(Oxidation (M))|F}Y;[KS]D{M(Oxidation (M))|F}WS{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QP][YQ]{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K]PM{M(Oxidation (M))|F}Y;[WD][KS]{M(Oxidation (M))|F}S{M(Oxidation (M))|F}Y;[KS]DW{M(Oxidation (M))|F}S{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QP]WS[QA]E;[{I|L}T][MN]G{M(Oxidation (M))|F}S{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QP]W[QA]SE 5.2636;4.2308;4.2048;3.647;3.4588;3.3929;3.2935;3.1359;2.9455;2.6723 -;-;-;-;-;-;-;-;-;- 420 1 2.075 65138.1 1.0 5308 3581 8882 DOHH2_400M_050219_1,8891 DOHH2_400M_050219_1,8891,FSKDWSFY True True FSKDWSFY 50.739883 540.245410144329 1254215.375 8882.0 ENST00000559720.5_1_15:45003705-45007919:+|nuORF;;ENSG00000166710|ENST00000648006|B2M 7.165173053741455 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8892 50.754 800.0 171060.0 25 0 13226.0 + 32701 SEAEMRLFY 9 143 573.2674098972278 1144.5202668612555 2 573.2682983279228 MULTI CID FTMS 0 0 0 8882 182675.375 1.0 0 0.0 10 Unmodified _SEAEMRLFY_ ENSG00000150990|ENST00000308736|DHX37 61.60191391372663 0.0251951588191061 1 {[ES]|[DT]|[{I|L}C]}AEMR{I|L}{M(Oxidation (M))|F}Y 9 0 + 63.28 0.0 0.0 5.529 5.529 88.256 0.0 0.0 0.0 1.2708877954877948 1.2708877954877948 1.2708877954877948 12.363850170130547 0 2.5924778212679485 0.0 0.0 0.3252574989159953 + + {[ES]|[DT]|[{I|L}C]}AEMR{I|L}{M(Oxidation (M))|F}Y;{[CP]|[EA]}SEMR{I|L}{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}AEMR{I|L}Y{M(Oxidation (M))|F};[TA]DEMR{I|L}{M(Oxidation (M))|F}Y;{[DA]|[EG]}TEMR{I|L}{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}A{[TV]|[{I|L}S]}{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}AEQ{I|L}{[TV]|[{I|L}S]}D[PG];{[ES]|[DT]|[{I|L}C]}A{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}Y;{[C(Carbamidomethyl (C))G]|[NC]}[QA]MR{I|L}{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))G]|[NC]}[KA]MR{I|L}{M(Oxidation (M))|F}Y 5.529;4.4487;4.3688;4.1689;3.7982;3.485;3.1938;2.96;2.8197;2.8197 +;-;-;-;-;-;-;-;-;- + 544 + 1 2.075 104878.4 0.699999988079071 5309 3581 8882 DOHH2_400M_050219_1,8892 DOHH2_400M_050219_1,8892,SEAEMRLFY True True SEAEMRLFY 50.753716 573.268298327923 727057.3125 8882.0 ENSG00000150990|ENST00000308736|DHX37 6.200469175974528 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8893 50.768 800.0 160180.0 25 0 17007.0 + 8691 AAFAVEPQGPALG 13 129 635.3271491631411 1268.6397453930822 2 635.3273803591728 MULTI CID FTMS 0 0 0 8882 106960.8515625 1.0 0 0.0 11 Unmodified _EVKAYLDFRE_ ENSG00000163002|ENST00000295119|NUP35 19.361941925380144 0.5226674314761524 1 [QP]GEVKEE 8 9 47.904 0.0 0.0 3.776 0.0 0.0 0.0 369.179698356226 369.179698356226 18.413280666000965 0.0 0.0 0.0 0 0.8252574989159953 0.8538719643217619 0.805462187404089 0.5 [QP]GEVKEE 3.776 - 7631 1 2.075 99143.5 0.550000011920929 5310 3581 8882 DOHH2_400M_050219_1,8893 DOHH2_400M_050219_1,8893,EVKAYLDFRE False False AAFAVEPQGPALG 50.767554 635.327380359173 575305.125 8882.0 ENSG00000163002|ENST00000295119|NUP35 7.41718864440918 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8894 50.781 800.0 63807.0 25 0 13969.0 + 16756 KFLIARQWQLR 11 85 729.9353324037635 1457.8561118743269 2 729.9355346560478 MULTI CID FTMS 0 0 0 8882 80189.5703125 0.3284531376608711 2 -0.293670654296875 12 Unmodified _KFLIARQWQLR_ REV__ENST00000480271.1_1_11:7805306-7805588:+|nuORF 1.1933415558491238 0.8695176722560516 1 Y 1 -1 11.99 0.0 0.0 0.82242 0.0 0.0 1276.7820589952237 0.0 1276.7820589952237 0.0 8.89075625191822 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.82242 - 16 + 1 2.075 46791.1 0.5 5311 3581 8882 DOHH2_400M_050219_1,8894 DOHH2_400M_050219_1,8894,KFLIARQWQLR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8895 50.797 800.0 26807.0 25 0 1798.3 -1 0 45 1010.8122124204092 3029.414807861428 3 1011.146960437298 MULTI CID FTMS 0 0 0 8882 73234.6171875 0.0846519053641425 -4 0.55426025390625 13 1 Y 1 -1 5.4846 0.0 0.0 0.18104 0.0 0.0 1644.760341163965 1218.5458468072875 2863.3061879712527 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.18104 - 9 + 1 2.075 23612.0 0.4799999892711639 5312 3581 8882 DOHH2_400M_050219_1,8895 DOHH2_400M_050219_1,8895, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8896 50.811 800.0 202450.0 25 0 12382.0 -1 YFKHCRYEPQF 11 133 787.8636052378436 1573.712657542487 2 787.8621703982353 MULTI CID FTMS 0 0 0 8882 169112.59375 1.0 0 0.0 14 Carbamidomethyl (C) _YFKHC(Carbamidomethyl (C))RYEPQF_ ENSG00000099957|ENST00000413302|P2RX6;nc|ENSG00000099957|O15547-2|P2RX6 6.2057823575117 0.8458686499021061 1 EAQQNA{M(Oxidation (M))|F}YQV{I|L} 11 -1 85.5 0.0 0.0 5.433 0.0 0.0 264.08629042793126 0.0 264.08629042793126 0.0 54.331188498779184 0.0 0.0 0 1.024227503252014 0.0 0.9436726795685342 1.5 EAQQNA{M(Oxidation (M))|F}YQV{I|L} 5.433 - 5252 1 2.075 115028.7 0.6299999952316284 5313 3581 8882 DOHH2_400M_050219_1,8896 DOHH2_400M_050219_1,8896,YFKHCRYEPQF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8897 50.826 800.0 46909.0 25 0 4246.5 -1 0 63 1034.4886197351611 3100.4440298056834 3 1035.155200183392 MULTI CID FTMS 0 0 0 8882 127449.2578125 1.0 0 0.0 15 1 PP 2 -1 10.969 0.0 0.0 0.35379 0.0 0.0 2452.1197883327104 451.1964205377563 2903.3162088704667 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.35379 - 44 + 1 2.075 34633.9 0.5600000023841858 5314 3581 8882 DOHH2_400M_050219_1,8897 DOHH2_400M_050219_1,8897, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8899 50.83 36.0 1203400.0 25 0 123290.0 + 30080 QVDPLSALKY 10 78 567.3134418574953 1132.6123307817904 2 567.3140136599541 MULTI CID FTMS 0 0 0 8898 1042538.0 0.251173137572391 2 -0.2961769104003906 1 Unmodified _QVDPLSALKY_ ENSG00000128585|ENST00000352689|MKLN1;ENST00000494785.5_1_7:131012658-131163543:+|nuORF;ENST00000497746.1_1_7:131149041-131155790:+|nuORF;ENST00000498778.5_1_7:131151082-131172419:+|nuORF;nc|ENSG00000128585|Q9UL63-2|MKLN1 40.23920728925047 0.1550410903091231 1 {[QV]|[N{I|L}]|[RA]|[KV]}DP{I|L}SA{I|L}KY 10 0 + 69.32 0.0 0.0 6.1204 6.1204 92.135 0.0 0.0 0.0 48.94901804489962 13.521825181113629 13.521825181113629 20.996075289514096 0 0.3252574989159953 1.6989700043360187 0.0 0.3494850021680094 + + {[QV]|[N{I|L}]|[RA]|[KV]}DP{I|L}SA{I|L}KY;{[QV]|[N{I|L}]|[RA]|[KV]}DP{I|L}SRRY 6.1204;4.2666 +;- + 162 + 1 2.075 35374.7 1.0 5315 3582 8898 DOHH2_400M_050219_1,8899 DOHH2_400M_050219_1,8899,QVDPLSALKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8900 50.832 31.0 1728100.0 25 0 126540.0 -1 0 63 881.4126494107194 1760.810745888239 2 881.9079467654228 MULTI CID FTMS 0 0 0 8898 2000052.0 0.0756009952763458 5 -0.6250419616699219 2 1 QY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L} 13 -1 74.527 0.0 0.0 4.2326 0.0 0.0 229.1865248502368 0.0 229.1865248502368 0.0 61.33990103141687 0.0 0.0 0 0.0 0.0 0.0 1.2302046884880935 QY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L} 4.2326 - 1773 + 1 2.075 45188.4 1.0 5316 3582 8898 DOHH2_400M_050219_1,8900 DOHH2_400M_050219_1,8900, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8901 50.833 55.0 1154000.0 25 0 107840.0 -1 0 54 915.442024762134 1828.869496591068 2 915.945849597454 MULTI CID FTMS 0 0 0 8898 984335.0625 1.0 0 0.0 3 1 [KT]EY{M(Oxidation (M))|F}ANQQAEEVC(Carbamidomethyl (C)){I|L} 15 -1 + 70.971 0.0 0.0 3.8806 3.8806 78.158 0.0 0.0 0.0 6.540517357631586 13.17024086827658 6.540517357631586 7.346821098145568 0 0.242992819099939 0.0 0.5 0.75 [KT]EY{M(Oxidation (M))|F}ANQQAEEVC(Carbamidomethyl (C)){I|L};[KT]QY[W{M(Oxidation (M))|F}]QQAEEVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQAEEV[CG]{I|L};[KT]EY{M(Oxidation (M))|F}AGGQQAEEVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]QAEEVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]AEEVC(Carbamidomethyl (C)){I|L};[YQ]VEEAQQNA{M(Oxidation (M))|F}HH[KT];[KT]QY[W{M(Oxidation (M))|F}]QQAEEV[CG]{I|L};[KT]QY[W{M(Oxidation (M))|F}]Q[AG]AEEVC(Carbamidomethyl (C)){I|L};[KT]QY[W{M(Oxidation (M))|F}][AG]QAEEVC(Carbamidomethyl (C)){I|L} 3.8806;3.4789;3.3868;3.3868;3.3868;3.3868;3.1605;2.984;2.984;2.984 -;-;-;-;-;-;-;-;-;- 654 + 1 2.075 49025.6 1.0 5317 3582 8898 DOHH2_400M_050219_1,8901 DOHH2_400M_050219_1,8901, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8902 50.835 67.0 991870.0 25 0 54435.0 + 33025 SEPDFVAKFY 10 77 601.7901420063719 1201.5657310795436 2 601.7904540896416 MULTI CID FTMS 0 0 0 8898 743612.9375 0.500439668912022 -1 0.1202621459960937 4 Unmodified _SEPDFVAKFY_ ENSG00000179933|ENST00000319074|C14orf119 31.26834338654808 0.266153677697784 1 {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F}Y 10 0 + 47.63 0.0 0.0 3.964 3.964 84.862 0.0 0.0 0.0 5.00508444608478 12.641368885835211 5.00508444608478 24.393326938302625 0 0.3807196863200844 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}[QA]EKPAV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ES]|[DT]|[{I|L}C]}P{[QC]|[C(Carbamidomethyl (C))A]}KPAV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ES]|[DT]|[{I|L}C]}P[KC]KPAV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ES]|[DT]|[{I|L}C]}[QA]EKPD[W{I|L}];{[ES]|[DT]|[{I|L}C]}P{[QC]|[C(Carbamidomethyl (C))A]}KPD[W{I|L}];{[ES]|[DT]|[{I|L}C]}[QA]EK{[VA]|[{I|L}G]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ES]|[DT]|[{I|L}C]}P{[QC]|[C(Carbamidomethyl (C))A]}K{[VA]|[{I|L}G]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ES]|[DT]|[{I|L}C]}P[KC]K{[VA]|[{I|L}G]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ES]|[DT]|[{I|L}C]}PDN[DV]K[W{I|L}] 3.964;1.9338;1.9338;1.9338;1.703;1.703;1.626;1.626;1.626;1.3059 +;-;-;-;-;-;-;-;-;- + 665 + 1 2.075 50650.3 1.0 5318 3582 8898 DOHH2_400M_050219_1,8902 DOHH2_400M_050219_1,8902,SEPDFVAKFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8903 50.837 102.0 744440.0 25 0 162820.0 + 6979 EELERILVY 9 87 582.3531471308836 1162.691741328567 2 582.3535034060478 MULTI CID FTMS 0 0 0 8898 519594.0 0.522985232366124 -1 0.1202621459960937 5 Unmodified _EEIKKKILY_ ENSG00000185344|ENST00000330342|ATP6V0A2 8.593279151180031 0.6146971463335029 1 [KA]V{I|L}{I|L} 5 6 16.823 0.0 0.0 1.4469 0.0 0.0 0.0 635.2777193658811 635.2777193658811 2.218487496163561 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [KA]V{I|L}{I|L} 1.4469 - 18 + 1 2.075 65382.5 1.0 5319 3582 8898 DOHH2_400M_050219_1,8903 DOHH2_400M_050219_1,8903,EEIKKKILY False False EELERILVY 50.836797 582.353503406048 452616.375 8898.0 ENSG00000185344|ENST00000330342|ATP6V0A2 4.017413218816121 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8904 50.851 800.0 282020.0 25 0 11525.0 -1 0 162 1044.5061796414025 3130.4967095244074 3 1044.841113269329 MULTI CID FTMS 0 0 0 8898 349943.78125 1.0 0 0.0 6 1 MNMV{I|L}{[MG]|[TS]}E[PS]DNQ 13 -1 91.957 0.0 0.0 2.9375 0.0 0.0 0.0 1680.8078096979127 1680.8078096979127 65.17744767140607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8494850021680094 0.8494850021680094 MNMV{I|L}{[MG]|[TS]}E[PS]DNQ 2.9375 - 28089 + 1 2.075 141844.0 0.9900000095367432 5320 3582 8898 DOHH2_400M_050219_1,8904 DOHH2_400M_050219_1,8904, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8905 50.855 215.0 772840.0 25 0 100530.0 20733 LLSKKKTISY 10 141 590.8666407936487 1179.7187286540973 2 590.8671142458916 MULTI CID FTMS 0 0 0 8898 324811.59375 0.62667229391097 -1 0.1202621459960937 7 Unmodified _LLSKKKTISY_ ENSG00000176200|ENST00000313253|OR4D11 1.7422754331352035 0.7185774482633845 1 SW 2 9 16.198 0.0 0.0 1.373 0.0 0.0 888.5966558478725 0.0 888.5966558478725 0.0 -1.8057749986614693 -1.8057749986614693 0.0 0 0.0 0.0 0.0 0.0 SW 1.373 - 422 + 1 2.075 125136.6 1.0 5321 3582 8898 DOHH2_400M_050219_1,8905 DOHH2_400M_050219_1,8905,LLSKKKTISY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8906 50.859 238.0 495290.0 25 0 61096.0 + 39752 VELLKKEI 8 120 486.3098324009501 970.6051118687004 2 486.3105346560478 MULTI CID FTMS 0 0 0 8898 299935.40625 1.0 0 0.0 8 Unmodified _VELLKKEI_ ENSG00000168256|ENST00000393885|NKIRAS2;ENSG00000197885|ENST00000425478|NKIRAS1;nc|ENSG00000168256|Q9NYR9-2|NKIRAS2 71.92227651296345 0.1092646934517833 1 {I|L}D{I|L}K{I|L}KE{I|L} 8 4 + 87.816 0.0 0.0 9.0475 9.0475 86.872 0.0 0.0 0.0 3.0102999566398125 6.989700043360188 3.0102999566398125 3.0102999566398125 0 1.2302046884880935 2.0 1.4604093769761874 0.0 {I|L}D{I|L}K{I|L}KE{I|L};D{I|L}{I|L}K{I|L}KE{I|L};{I|L}D{I|L}{I|L}KKE{I|L};{I|L}D{I|L}K{I|L}K{I|L}E;D{I|L}{I|L}{I|L}KKE{I|L};D{I|L}{I|L}K{I|L}K{I|L}E;{I|L}D{I|L}{I|L}KK{I|L}E;D{I|L}{I|L}{I|L}KK{I|L}E;{I|L}D{I|L}K{I|L}[SG]{I|L}{I|L};D{I|L}{I|L}K{I|L}[SG]{I|L}{I|L} 9.0475;8.7374;8.332;8.3274;8.0218;8.0173;7.6118;7.3017;7.0989;6.7887 -;-;-;-;-;-;-;-;-;- 525 + 1 2.075 94509.2 1.0 5322 3582 8898 DOHH2_400M_050219_1,8906 DOHH2_400M_050219_1,8906,VELLKKEI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8907 50.873 800.0 225130.0 25 0 29775.0 16808 KGPHLRSKQL 10 154 388.57123075687446 0 388.5712463259697 PEAK CID FTMS 0 0 0 8898 225468.4375 0.8280534095763276 -1 0.1202621459960937 9 Unmodified _KGPHLRSKQL_ chr1:159836212-159837085|21|15.52|0.11|7.14|+|2|None,SLAMF8|1 3.5964929083625545 0.3961065659209837 1 M 1 10 3.9794 0.0 0.0 0.51339 0.0 0.0 386.9194868049614 254.14075647525627 641.0602432802177 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.51339 - 4 + 1 2.075 153060.9 0.6800000071525574 5323 3582 8898 DOHH2_400M_050219_1,8907 DOHH2_400M_050219_1,8907,KGPHLRSKQL False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 8908 50.878 276.0 922710.0 25 0 56181.0 + -1 TCPLWGCCW 9 205 591.7315606804403 1181.4485684276806 2 591.7303954958916 MULTI CID FTMS 0 0 0 8898 188718.8125 0.7351245663843801 -1 0.1202621459960937 10 2 Carbamidomethyl (C) _TC(Carbamidomethyl (C))PLWGC(Carbamidomethyl (C))CW_ REV__ENSG00000065802|ENST00000264607|ASB1 8.593279151180031 0.6146971463335029 1 ED{I|L}[WQ]{I|L}SY 8 -1 33.637 0.0 0.0 2.8471 0.0 0.0 128.9556332199341 0.0 128.9556332199341 0.0 4.171166654019796 0.0 0.0 0 0.3494850021680094 0.0 0.8818108876706969 0.0 ED{I|L}[WQ]{I|L}SY 2.8471 - 1848 + 1 2.075 187183.5 1.0 5324 3582 8898 DOHH2_400M_050219_1,8908 DOHH2_400M_050219_1,8908,TCPLWGCCW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8909 50.892 800.0 77161.0 25 0 19585.0 29840 QQLRRRRRSW 10 81 721.4224614894051 1440.8303700456102 2 721.4213744997978 MULTI CID FTMS 0 0 0 8898 151721.078125 0.3556549217124327 3 -0.4286575317382812 11 Unmodified _QQLRRRRRSW_ ENST00000606379.1_1_1:19401251-19401329:-|nuORF 0.4007161486938917 0.7247829448918255 1 Y 1 10 11.109 0.0 0.0 0.77103 0.0 0.0 1259.7561188022491 0.0 1259.7561188022491 0.0 11.10924374808178 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.77103 - 14 + 1 2.075 57524.6 0.6299999952316284 5325 3582 8898 DOHH2_400M_050219_1,8909 DOHH2_400M_050219_1,8909,QQLRRRRRSW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8910 50.904 674.0 251330.0 25 0 14397.0 8047 ENLRVIVL 8 166 478.3003425489834 954.5861321647668 2 478.3000060915947 MULTI CID FTMS 0 0 0 8898 118601.1640625 1.0 0 0.0 12 Unmodified _ENLRVIVL_ nc|ENSG00000103222|P33527-4|ABCC1;nc|ENSG00000103222|P33527-6|ABCC1;nc|ENSG00000103222|P33527-7|ABCC1;nc|ENSG00000103222|P33527-8|ABCC1 18.13498045792455 0.6430038125133779 1 [VS]{I|L}{I|L}P{I|L}KW 8 6 + 45.482 0.0 0.0 4.7645 4.7645 55.802 0.0 0.0 0.0 24.90958342159153 3.703292705075612 3.703292705075612 0.0 0 0.4247425010840047 2.0 0.0 0.0 [VS]{I|L}{I|L}P{I|L}KW;[VS]{I|L}P{I|L}{I|L}KW;[VS]{I|L}{I|L}PQVS{I|L};[VS]{I|L}P{I|L}QVS{I|L};[VS]{I|L}PV[Q{I|L}]S{I|L};[VS]{I|L}{I|L}P[WK]{I|L};[VS]{I|L}P{I|L}[WK]{I|L};[VS]{I|L}{I|L}E[KA][VP];[PG]{I|L}K{M(Oxidation (M))|F}{I|L}{I|L}[PA];[PG]{I|L}K{I|L}{M(Oxidation (M))|F}{I|L}[PA] 4.7645;4.7645;3.8834;3.8834;3.5353;3.4647;3.4647;3.2905;2.5844;2.5015 -;-;-;-;-;-;-;-;-;- 418 + 1 2.075 131637.0 1.0 5326 3582 8898 DOHH2_400M_050219_1,8910 DOHH2_400M_050219_1,8910,ENLRVIVL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8911 50.911 332.0 423820.0 25 0 61589.0 + 27537 PKTRRLWIK 9 126 599.3798938799496 1196.745234826699 2 599.3811523318291 MULTI CID FTMS 0 0 0 8898 113147.828125 1.0 0 0.0 13 Unmodified _PKTRRLWIK_ REV__ENSG00000112159|ENST00000369393|MDN1 1.844237919475145 0.850302753031785 1 Y 1 -1 11.783 0.0 0.0 0.98457 0.0 0.0 1015.6704800432992 0.0 1015.6704800432992 0.0 2.105026563703652 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.98457 - 53 + 1 2.075 105900.5 1.0 5327 3582 8898 DOHH2_400M_050219_1,8911 DOHH2_400M_050219_1,8911,PKTRRLWIK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8912 50.923 711.0 155490.0 25 0 8635.2 + 25433 NEFPEPIKL 9 132 543.7944000639928 1085.5742471947856 2 543.7950927615166 MULTI CID FTMS 0 0 0 8898 103233.3203125 1.0 0 0.0 14 Unmodified _NEFPEPIKL_ ENSG00000075785|ENST00000265062|RAB7A 43.77239144664712 0.0547478964384323 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}PE[{I|L}P]K{I|L} 9 0 + 36.683 0.0 0.0 3.3791 3.3791 80.621 0.0 0.0 0.0 19.594217171654105 4.503479917138748 4.503479917138748 10.78769417182984 0 1.0 0.0 0.4247425010840047 0.2134679910804404 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}PE[{I|L}P]K{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}PE[KP]{I|L}{I|L} 3.3791;2.3854 +;- + 234 + 1 2.075 87612.8 1.0 5328 3582 8898 DOHH2_400M_050219_1,8912 DOHH2_400M_050219_1,8912,NEFPEPIKL True True NEFPEPIKL 50.923482 543.795092761517 740715.75 8898.0 ENSG00000075785|ENST00000265062|RAB7A 5.518816788991292 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8913 50.937 800.0 92477.0 25 0 9681.3 + 33876 SLFKREKLLSY 11 111 692.4006053092874 0 692.3999511599541 PEAK CID FTMS 0 0 0 8898 87285.046875 1.0 0 0.0 15 Unmodified _SLFKREKLLSY_ REV__ENSG00000117650|ENST00000366999|NEK2;REV__nc|ENSG00000117650|P51955-2|NEK2;REV__nc|ENSG00000117650|P51955-4|NEK2 2.735195868890462 0.4761840153648598 1 {I|L} 1 -1 5.4846 0.0 0.0 0.39663 0.0 0.0 428.31547956213086 838.3621920221311 1266.677671584262 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.39663 + + 7 + 1 2.075 59845.2 0.4399999976158142 5329 3582 8898 DOHH2_400M_050219_1,8913 DOHH2_400M_050219_1,8913,SLFKREKLLSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8914 50.952 800.0 152240.0 25 0 25022.0 -1 0 100 1027.005910405745 2051.99726787829 2 1027.614184558392 MULTI CID FTMS 0 0 0 8898 108292.53125 0.7805558893564103 2 -0.2961769104003906 16 1 PC[HQ]PPPPPP{[QN]|[E{I|L}]|[KN]} 12 -1 59.484 0.0 0.0 2.8988 0.0 0.0 744.3993197355152 0.0 744.3993197355152 0.0 35.96212636350435 0.0 0.0 0 0.9247425010840048 0.0 0.0 1.3684151806525389 PC[HQ]PPPPPP{[QN]|[E{I|L}]|[KN]} 2.8988 - 3608 + 1 2.075 85629.9 0.7099999785423279 5330 3582 8898 DOHH2_400M_050219_1,8914 DOHH2_400M_050219_1,8914, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8915 50.966 800.0 60007.0 25 0 12594.0 -1 0 56 1105.4351525390014 3313.2836282172043 3 1106.103442370892 MULTI CID FTMS 0 0 0 8898 102198.6875 1.0 0 0.0 17 1 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.16553 0.0 0.0 2426.8976551720857 736.2998846579846 3163.19753983007 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.16553 - 52 + 1 2.075 45358.3 0.5699999928474426 5331 3582 8898 DOHH2_400M_050219_1,8915 DOHH2_400M_050219_1,8915, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8916 50.97 209.0 516410.0 25 0 114430.0 + 8665 EVGDKFLSY 9 83 529.2650630468747 1056.5155731605494 2 529.2663452029228 MULTI CID FTMS 0 0 0 8898 98471.765625 0.901771772732141 -1 0.1202621459960937 18 Unmodified _EVGDKFLSY_ REV__ENST00000422311.1_1_20:5529653-5529806:+|nuORF 26.88365393820708 0.1891292719743517 1 {M(Oxidation (M))|F}{I|L}SY 4 -1 32.977 0.0 0.0 3.1213 0.0 0.0 528.2544780451182 0.0 528.2544780451182 0.0 14.037209583838216 0.0 0.0 0 0.0 0.0 1.055462187404089 0.0 {M(Oxidation (M))|F}{I|L}SY 3.1213 + + 80 + 1 2.075 86143.8 1.0 5332 3582 8898 DOHH2_400M_050219_1,8916 DOHH2_400M_050219_1,8916,EVGDKFLSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8917 50.985 800.0 204110.0 25 0 12172.0 -1 0 143 1057.850156235943 3170.5286393080287 3 1058.186450183392 MULTI CID FTMS 0 0 0 8898 91787.171875 0.3903879191440091 -1 0.1202621459960937 19 1 D{[SA]|[TG]}NVMEN 8 -1 60.438 0.0 0.0 1.9062 0.0 0.0 2292.107187924988 0.0 2292.107187924988 0.0 29.99282213420201 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.805462187404089 D{[SA]|[TG]}NVMEN 1.9062 - 3325 1 2.075 110860.4 0.550000011920929 5333 3582 8898 DOHH2_400M_050219_1,8917 DOHH2_400M_050219_1,8917, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8918 50.999 800.0 73422.0 25 0 14999.0 -1 0 65 1116.9795192168783 0 1116.980151355267 PEAK CID FTMS 0 0 0 8898 87630.7109375 1.0 0 0.0 20 1 YT{I|L} 3 -1 15.445 0.0 0.0 0.69201 0.0 0.0 1133.4117229046572 718.3049410455686 1851.7166639502257 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YT{I|L} 0.69201 - 73 + 1 2.075 43243.3 0.5199999809265137 5334 3582 8898 DOHH2_400M_050219_1,8918 DOHH2_400M_050219_1,8918, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8920 51.004 8.5 5439300.0 25 0 698030.0 + 45507 YTSDYFISY 9 68 579.753072096793 1157.4915912603858 2 579.7537109255791 MULTI CID FTMS 0 0 0 8919 6599414.0 1.0 0 0.0 1 Unmodified _YTSDYFISY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 50.855029805455786 0.0384952370514206 1 {[YD]|[{M(Oxidation (M))|F}M]}ST{M(Oxidation (M))|F}Y 6 5 41.018 0.0 0.0 3.5437 0.0 0.0 0.0 378.1595765529051 378.1595765529051 14.50759820578515 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.2302046884880935 0.0 {[YD]|[{M(Oxidation (M))|F}M]}ST{M(Oxidation (M))|F}Y 3.5437 - 225 1 2.075 39755.4 1.0 5335 3583 8919 DOHH2_400M_050219_1,8920 DOHH2_400M_050219_1,8920,YTSDYFISY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8921 51.006 101.0 314380.0 25 0 26553.0 + 574 AEINNIIKI 9 65 514.3109483230637 1026.607343712927 2 514.3112670779228 MULTI CID FTMS 0 0 0 8919 240286.3125 0.0616961456070894 2 -0.2552490234375 2 Unmodified _AEINNIIKI_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;ENST00000491510.1_1_3:25668659-25671642:-|nuORF;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 19.256988751693697 0.3154191944385105 1 {[CP]|[EA]}{I|L}N{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K{I|L} 9 0 + 30.334 0.0 0.0 2.9548 2.9548 78.636 0.0 0.0 0.0 18.428637390930263 9.888526392242024 9.888526392242024 9.208187539523752 0 0.4247425010840047 0.0 0.0 0.0 + + {[CP]|[EA]}{I|L}N{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K{I|L};{[CP]|[EA]}{I|L}GG{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K{I|L} 2.9548;2.0578 +;- + 51 + 1 2.075 31814.5 1.0 5336 3583 8919 DOHH2_400M_050219_1,8921 DOHH2_400M_050219_1,8921,AEINNIIKI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8922 51.007 18.0 3356800.0 25 0 248800.0 + 29012 QEDLRTFSW 9 88 591.2826632249665 1180.550773516733 2 591.2831298708916 MULTI CID FTMS 0 0 0 8919 2733021.25 1.0 0 0.0 3 Unmodified _QEDLRTFSW_ ENSG00000145907|ENST00000356245|G3BP1 57.72198328787511 0.0273433238377839 1 QED{I|L}A 5 5 50.159 0.0 0.0 4.2488 0.0 0.0 0.0 621.2663057916624 621.2663057916624 24.458191842299293 0.0 0.0 0.0 0 0.2614393726401688 0.958607314841775 0.0 0.0 QED{I|L}A 4.2488 - 136 + 1 2.075 52652.4 1.0 5337 3583 8919 DOHH2_400M_050219_1,8922 DOHH2_400M_050219_1,8922,QEDLRTFSW True True QEDLRTFSW 51.007123 591.283129870892 49949985.0 8919.0 ENSG00000145907|ENST00000356245|G3BP1 7.887495040893555 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8923 51.008 28.0 2651400.0 25 0 281220.0 + 25493 NELPGLKW 8 81 478.7636439321211 955.5127349310422 2 478.7638122439384 MULTI CID FTMS 0 0 0 8919 2028219.75 0.3868603702680425 -1 0.1734085083007812 4 Unmodified _NELPGLKW_ ENSG00000037474|ENST00000264670|NSUN2;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 64.23631603340823 0.116217441302575 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG{I|L}KW 8 0 + 46.459 0.0 0.0 4.8622 4.8622 88.865 0.0 0.0 0.0 28.7562484844592 11.202817147792196 11.202817147792196 46.45928604566304 0 0.9247425010840048 0.0 0.0 0.25 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG{I|L}KW 4.8622 + + 93 + 1 2.075 64620.5 1.0 5338 3583 8919 DOHH2_400M_050219_1,8923 DOHH2_400M_050219_1,8923,NELPGLKW True True NELPGLKW 51.008302 478.763812243938 83854716.0 8919.0 nc|ENSG00000037474|Q08J23-3|NSUN2;;ENSG00000037474|ENST00000264670|NSUN2;;nc|ENSG00000037474|Q08J23-2|NSUN2 6.738439559936523 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8924 51.009 33.0 1971700.0 25 0 136390.0 + 12346 GTDELRLLY 9 87 540.2900254963683 1078.5654980595366 2 540.2905761599541 MULTI CID FTMS 0 0 0 8919 1682300.25 0.380932252466815 -1 0.1734085083007812 5 Unmodified _GTDELRLLY_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 57.72198328787511 0.0273433238377839 1 {[SA]|[TG]}DE{I|L}{I|L}R{I|L}Y 9 2 + 82.942 0.0 0.0 7.69 7.69 95.495 0.0 0.0 0.0 73.76078152608656 16.478174818886373 16.478174818886373 19.005149978319903 0 1.2059771852360797 1.5228787452803376 0.3252574989159953 0.3807196863200844 {[SA]|[TG]}DE{I|L}{I|L}R{I|L}Y;{[ES]|[DT]|[{I|L}C]}GE{I|L}{I|L}R{I|L}Y;{[ES]|[DT]|[{I|L}C]}EG{I|L}{I|L}R{I|L}Y 7.69;5.928;5.6264 -;-;- 105 + 1 2.075 56048.0 1.0 5339 3583 8919 DOHH2_400M_050219_1,8924 DOHH2_400M_050219_1,8924,GTDELRLLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8925 51.013 169.0 514830.0 25 0 29786.0 -1 0 90 1029.8307320796832 3086.47036683925 3 1030.166064441204 MULTI CID FTMS 0 0 0 8919 858066.4375 0.4015996927391787 -1 0.1734085083007812 6 1 [MN]MVN[WH]{M(Oxidation (M))|F} 8 -1 50.891 0.0 0.0 1.6488 0.0 0.0 0.0 2023.948294329708 2023.948294329708 13.731489203658027 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [MN]MVN[WH]{M(Oxidation (M))|F} 1.6488 - 2672 + 1 2.075 64829.8 1.0 5340 3583 8919 DOHH2_400M_050219_1,8925 DOHH2_400M_050219_1,8925, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8926 51.015 85.0 560180.0 25 0 94991.0 + 29913 QSEIASMLY 9 79 521.249509829351 1040.484466725502 2 521.2498657107353 MULTI CID FTMS 0 0 0 8919 754945.625 1.0 0 0.0 7 Unmodified _QSEIASMLY_ ENSG00000197256|ENST00000586659|KANK2;ENST00000587317.1_1_19:11277236-11281082:-|nuORF;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2 60.07390631473393 0.0260411565414776 1 {[ES]|[DT]|[{I|L}C]}Q{I|L}ASM{I|L}Y 9 2 + 44.803 0.0 0.0 4.3059 4.3059 71.582 0.0 0.0 0.0 0.5102999566398125 5.813018396694574 0.5102999566398125 0.5102999566398125 0 0.8935078169319297 0.0 1.6307196863200843 0.5 {[ES]|[DT]|[{I|L}C]}Q{I|L}ASM{I|L}Y;{[QS]|[NT]}E{I|L}ASM{I|L}Y;{[ES]|[DT]|[{I|L}C]}{I|L}AGASM{I|L}Y;{[ES]|[DT]|[{I|L}C]}{I|L}QASM{I|L}Y;{[ES]|[DT]|[{I|L}C]}{I|L}AQSM{I|L}Y;{[ES]|[DT]|[{I|L}C]}[AG]{I|L}ASM{I|L}Y 4.3059;4.2569;4.1829;4.1816;3.8444;2.9404 -;+;-;-;-;- + 265 1 2.075 38636.7 1.0 5341 3583 8919 DOHH2_400M_050219_1,8926 DOHH2_400M_050219_1,8926,QSEIASMLY True True QSEIASMLY 51.014744 521.249865710735 4774792.5 8919.0 ENSG00000197256|ENST00000586659|KANK2;;ENST00000587317.1_1_19:11277236-11281082:-|nuORF;;nc|ENSG00000197256|Q63ZY3-2|KANK2;;nc|ENSG00000197256|Q63ZY3-3|KANK2 3.936636765797933 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8927 51.017 118.0 513880.0 25 0 118550.0 + 44125 YLDKEDTFFY 10 64 670.805943456335 1339.5973339794698 2 670.8061401247978 MULTI CID FTMS 0 0 0 8919 444221.15625 1.0 0 0.0 8 Unmodified _YLDKEDTFFY_ ENSG00000057935|ENST00000405094|MTA3;nc|ENSG00000057935|Q9BTC8-2|MTA3 41.95555342248728 0.1369168616057562 1 [Y{I|L}]DWWT{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 9 3 + 61.048 0.0 0.0 4.5572 4.5572 74.876 0.0 0.0 0.0 25.6424927368726 45.56356549837645 25.6424927368726 2.244237387763093 0 1.242992819099939 2.0 0.8494850021680094 0.0 [Y{I|L}]DWWT{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;[Y{I|L}]D[QT]D{I|L}Y{M(Oxidation (M))|F}Y;[Y{I|L}]WWDT{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;[Y{I|L}]WW{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}Y;[Y{I|L}]WW{[CP]|[EA]}Y{M(Oxidation (M))|F}Y;[QP]MM[Y{I|L}]T{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;[QP]MM[{M(Oxidation (M))|F}T]{I|L}Y{M(Oxidation (M))|F}Y 4.5572;4.3897;4.201;2.709;2.4842;1.815;1.5161 -;-;-;-;-;-;- 92 1 2.075 51466.6 1.0 5342 3583 8919 DOHH2_400M_050219_1,8927 DOHH2_400M_050219_1,8927,YLDKEDTFFY False True YLDKEDTFFY 51.01721 670.806140124798 1359384.875 8919.0 nc|ENSG00000057935|Q9BTC8-2|MTA3;;ENSG00000057935|ENST00000405094|MTA3 8.694375991821289 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8928 51.02 128.0 590830.0 25 0 52333.0 + 11216 GEPPGFLHSW 10 86 563.76768557751 1125.5208182218198 2 563.7697631716728 MULTI CID FTMS 0 0 0 8919 407185.1875 0.8355806497660809 -1 0.1734085083007812 9 Unmodified _GEPPGFLHSW_ ENSG00000130511|ENST00000270061|SSBP4;ENSG00000145687|ENST00000615665|SSBP2;ENSG00000157216|ENST00000610401|SSBP3;ENST00000506960.5_1_5:80911285-80946133:-|nuORF;ENST00000508912.1_1_5:80932374-80946133:-|nuORF;ENST00000589764.1_1_18:12067489-12068164:-|nuORF;ENST00000598159.6_1_19:18538161-18542842:+|nuORF;nc|ENSG00000130511|Q9BWG4-2|SSBP4;nc|ENSG00000145687|P81877-2|SSBP2;nc|ENSG00000145687|P81877-3|SSBP2;nc|ENSG00000145687|P81877-4|SSBP2;nc|ENSG00000145687|P81877-5|SSBP2;nc|ENSG00000145687|P81877|SSBP2;nc|ENSG00000157216|Q9BWW4-2|SSBP3;nc|ENSG00000157216|Q9BWW4-3|SSBP3 47.74868867922204 0.0933642699623533 1 {[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PP{I|L}HSW 10 4 + 68.99 0.0 0.0 6.1296 6.1296 80.736 0.0 0.0 0.0 7.7815125038364386 13.037275116073346 7.7815125038364386 2.3978685854810777 0 0.4247425010840047 1.6989700043360187 1.5356668758921828 0.0 {[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PP{I|L}HSW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}SH{I|L}PPW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}SHP{I|L}PW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PSH{I|L}PW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}SPH{I|L}PW;{[DA]|[EG]}{[QN]|[E{I|L}]|[KN]}{I|L}PPWW;{[DA]|[EG]}[YQ]H{I|L}PPW;{[DA]|[EG]}[YQ]HP{I|L}PW;{[CT]|[{M(Oxidation (M))|F}G]}SH{I|L}PPWW;{[DA]|[EG]}{[QN]|[E{I|L}]|[KN]}{I|L}PWPW 6.1296;5.9165;5.8304;5.4773;5.4065;4.9712;4.6483;4.5622;4.416;4.3933 -;-;-;-;-;-;-;-;-;- 495 + 1 2.075 66369.8 1.0 5343 3583 8919 DOHH2_400M_050219_1,8928 DOHH2_400M_050219_1,8928,GEPPGFLHSW True True GEPPGFLHSW 51.019846 563.769763171673 8426424.0 8919.0 ENSG00000157216|ENST00000610401|SSBP3;;ENST00000598159.6_1_19:18538161-18542842:+|nuORF;;nc|ENSG00000145687|P81877-3|SSBP2;;nc|ENSG00000130511|Q9BWG4-2|SSBP4;;nc|ENSG00000145687|P81877-5|SSBP2;;nc|ENSG00000145687|P81877-4|SSBP2;;nc|ENSG00000145687|P81877-2|SSBP2;;nc|ENSG00000157216|Q9BWW4-3|SSBP3;;ENSG00000145687|ENST00000615665|SSBP2;;ENST00000589764.1_1_18:12067489-12068164:-|nuORF;;nc|ENSG00000145687|P81877|SSBP2;;nc|ENSG00000157216|Q9BWW4-2|SSBP3;;ENSG00000130511|ENST00000270061|SSBP4;;ENST00000508912.1_1_5:80932374-80946133:-|nuORF;;ENST00000506960.5_1_5:80911285-80946133:-|nuORF 7.410436312357585 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8929 51.024 209.0 473260.0 25 0 50927.0 + 1560 ALLDRIVSV 9 102 493.3059402635204 984.5973275938408 2 493.3059265017509 MULTI CID FTMS 0 0 0 8919 282858.53125 1.0 0 0.0 10 Unmodified _ALLDRIVSV_ ENSG00000155561|ENST00000285968|NUP205 34.93206674587334 0.1032771302489716 1 [{I|L}A]{I|L}D 4 5 38.5 0.0 0.0 3.9102 0.0 0.0 0.0 569.3454184735 569.3454184735 14.361818737241734 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + [{I|L}A]{I|L}D 3.9102 + + 154 + 1 2.075 79236.6 1.0 5344 3583 8919 DOHH2_400M_050219_1,8929 DOHH2_400M_050219_1,8929,ALLDRIVSV True True ALLDRIVSV 51.023806 493.305926501751 2001189.875 8919.0 ENSG00000155561|ENST00000285968|NUP205 5.42119566599528 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8930 51.03 350.0 202180.0 25 0 73206.0 13326 HLDALLKQIKF 11 83 663.3984460693767 1324.7823392055534 2 663.3989745974541 MULTI CID FTMS 0 0 0 8919 276430.1875 1.0 0 0.0 11 Unmodified _HLDALLKQIKF_ ENSG00000118007|ENST00000383202|STAG1;nc|ENSG00000118007|Q8WVM7-2|STAG1 2.843284757254958 0.8617331327080043 1 Y 1 11 10.181 0.0 0.0 0.76851 0.0 0.0 1143.7083626203955 0.0 1143.7083626203955 0.0 5.576967093510348 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.76851 - 5 + 1 2.075 74338.3 1.0 5345 3583 8919 DOHH2_400M_050219_1,8930 DOHH2_400M_050219_1,8930,HLDALLKQIKF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8931 51.034 200.0 307650.0 25 0 45521.0 + + 25799 TQMVRMIL 8 85 495.9590103638165 1484.8552016916494 3 495.9591857790947 MULTI CID FTMS 0 0 0 8919 228130.125 1.0 0 0.0 12 Unmodified _NKMKFIHRRKQ_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 1.1097533296519684 0.8699120469545434 1 QMV 3 -1 18.188 0.0 0.0 1.2249 0.0 0.0 595.3770655605932 528.2989596002561 1123.6760251608491 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 QMV 1.2249 - 62 + 1 2.075 60778.9 1.0 5346 3583 8919 DOHH2_400M_050219_1,8931 DOHH2_400M_050219_1,8931,NKMKFIHRRKQ False False TQMVRMIL 51.033966 495.959185779095 1537769.75 8919.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 6.539943854014079 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8932 51.04 305.0 297610.0 25 0 18224.0 + 7041 EELEQFARTF 10 87 635.3085811791574 1268.602609425115 2 635.3091308474541 MULTI CID FTMS 0 0 0 8919 221774.9375 1.0 0 0.0 13 Unmodified _EELEQFARTF_ chr19:42092134-42093829|48|27.9|0.5|5.79|-|ENST00000529067|POU2F2,POU2F2;chr19:42099821-42116709|41|13.12|0.46|4.84|-|ENST00000526831|POU2F2,POU2F2;chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2;ENSG00000028277|ENST00000692977|POU2F2;nc|ENSG00000028277|P09086-2|POU2F2;nc|ENSG00000028277|P09086-3|POU2F2;nc|ENSG00000028277|P09086-4|POU2F2;nc|ENSG00000028277|P09086-5|POU2F2;nc|ENSG00000028277|P09086|POU2F2 107.09958533191995 0.0045178149581522 1 EE{I|L}EQ{M(Oxidation (M))|F}ART{M(Oxidation (M))|F} 10 0 + 95.6 0.0 0.0 7.5359 7.5359 91.274 0.0 0.0 0.0 66.63093786472515 19.431890546242343 19.431890546242343 9.164539485499262 0 1.2302046884880935 1.5228787452803376 1.1549471895720984 0.7134679910804405 + + EE{I|L}EQ{M(Oxidation (M))|F}ART{M(Oxidation (M))|F};EE{I|L}E[AG]{M(Oxidation (M))|F}ART{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}SEQ{M(Oxidation (M))|F}ART{M(Oxidation (M))|F};EE{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ART{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}Q[RN]QE{I|L}[HC];EE{I|L}EQ{M(Oxidation (M))|F}A[HA][VP];EE{I|L}EQ{M(Oxidation (M))|F}RRY;{[{M(Oxidation (M))|F}H]|[RQ]}SE[AG]{M(Oxidation (M))|F}ART{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}Q[RN][AG]E{I|L}[HC];{[QN]|[E{I|L}]|[KN]}[AG][RN]QE{I|L}[HC] 7.5359;6.8135;5.5652;5.2841;5.1405;4.9857;4.9031;4.8428;4.418;4.418 +;-;-;-;-;-;-;-;-;- + 363 + 1 2.075 75559.2 1.0 5347 3583 8919 DOHH2_400M_050219_1,8932 DOHH2_400M_050219_1,8932,EELEQFARTF True True EELEQFARTF 51.039566 635.309130847454 2081273.25 8919.0 nc|ENSG00000028277|P09086-4|POU2F2;;nc|ENSG00000028277|P09086|POU2F2;;chr19:42099821-42116709|41|13.12|0.46|4.84|-|ENST00000526831|POU2F2,POU2F2;;chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2;;nc|ENSG00000028277|P09086-3|POU2F2;;nc|ENSG00000028277|P09086-5|POU2F2;;chr19:42092134-42093829|48|27.9|0.5|5.79|-|ENST00000529067|POU2F2,POU2F2;;ENSG00000028277|ENST00000692977|POU2F2;;nc|ENSG00000028277|P09086-2|POU2F2 7.607419490814209 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8933 51.045 320.0 202010.0 25 0 53453.0 + -1 RRKADRRKRPM 11 73 743.4355436130205 1484.856534292841 2 743.4353515505791 MULTI CID FTMS 0 0 0 8919 210239.359375 0.7434867025403159 -1 0.1734085083007812 14 Oxidation (M) _RRKADRRKRPM(Oxidation (M))_ REV__ENST00000294119.6_1_11:62444064-62444232:-|nuORF 1.1933415558491238 0.8695176722560516 1 Y 1 -1 10.837 0.0 0.0 0.72987 0.0 0.0 1303.7818863209643 0.0 1303.7818863209643 0.0 6.858055349748442 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.72987 - 8 + 1 2.075 60810.8 1.0 5348 3583 8919 DOHH2_400M_050219_1,8933 DOHH2_400M_050219_1,8933,RRKADRRKRPM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8934 51.059 800.0 201170.0 25 0 10641.0 -1 0 137 1025.1554281958731 3072.44445518782 3 1026.156787097454 MULTI CID FTMS 0 0 0 8919 180145.0 0.9964154459743166 -1 0.1734085083007812 15 1 [MN]P 3 -1 20.942 0.0 0.0 0.68161 0.0 0.0 0.0 2727.2859828579944 2727.2859828579944 -0.0814659690041708 0.0 -0.0814659690041708 0.0 0 0.0 2.0 0.0 0.0 [MN]P 0.68161 - 7471 1 2.075 105331.2 0.699999988079071 5349 3583 8919 DOHH2_400M_050219_1,8934 DOHH2_400M_050219_1,8934, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8935 51.073 800.0 211340.0 25 0 17742.0 + 11335 GFEPHAWT 8 159 472.7172552706193 943.4199576080388 2 472.7180358767509 MULTI CID FTMS 0 0 0 8919 123387.9453125 0.2754428073857806 1 -0.1227684020996093 16 Unmodified _GFEPHAWT_ REV__ENSG00000085415|ENST00000399892|SEH1L;REV__nc|ENSG00000085415|Q96EE3|SEH1L 2.302733041254933 0.8103549651115762 1 NYYQ 4 -1 10.916 0.0 0.0 1.1571 0.0 0.0 357.17903334785314 0.0 357.17903334785314 0.0 0.3204430404514582 0.0 0.0 0 0.25 0.0 0.0 0.0 NYYQ 1.1571 - 58 1 2.075 133580.2 0.5099999904632568 5350 3583 8919 DOHH2_400M_050219_1,8935 DOHH2_400M_050219_1,8935,GFEPHAWT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8936 51.085 603.0 434360.0 25 0 52173.0 + + 38686 SESELTRLL 9 170 524.7674225865945 1047.520292239989 2 524.7681762576103 MULTI CID FTMS 0 0 0 8919 99331.171875 0.3831765865492327 -1 0.1734085083007812 17 Unmodified _TTLWEDVGK_ nc|ENSG00000108312|P17480-2|UBTF;ENSG00000108312|ENST00000436088|UBTF 20.453626601364224 0.2830276176381075 1 {M(Oxidation (M))|F}{I|L}SKVGK 7 -1 66.282 0.0 0.0 6.3275 0.0 0.0 270.0430704734575 0.0 270.0430704734575 0.0 43.886524328413486 0.0 0.0 0 2.3737125054200234 0.0 0.7614393726401688 0.3740523292357047 {M(Oxidation (M))|F}{I|L}SKVGK 6.3275 - 659 + 1 2.075 197581.8 1.0 5351 3583 8919 DOHH2_400M_050219_1,8936 DOHH2_400M_050219_1,8936,TTLWEDVGK False False SESELTRLL 51.084823 524.76817625761 212149.078125 8919.0 nc|ENSG00000108312|P17480-2|UBTF;;ENSG00000108312|ENST00000436088|UBTF -0.399951488400499 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8937 51.099 800.0 83243.0 25 0 7303.4 + + -1 MMGHRPVLVL 10 113 606.2094445602255 1210.404336187251 2 606.2095825076103 MULTI CID FTMS 0 0 0 8919 97895.5390625 1.0 0 0.0 18 3 Carbamidomethyl (C) _HWEC(Carbamidomethyl (C))PC(Carbamidomethyl (C))C(Carbamidomethyl (C))Y_ ENST00000472765.6_1_1:156307533-156307990:-|nuORF;ENST00000368256.3_1_1:156302875-156308050:-|nuORF;ENST00000533194.5_1_1:156303393-156308050:-|nuORF;nc|ENSG00000163468|P49368-2|CCT3;ENST00000489870.1_1_1:156305554-156307990:-|nuORF;ENSG00000163468|ENST00000295688|CCT3 2.889219685676258 0.8067950007271085 1 Y 1 -1 13.979 0.0 0.0 1.1549 0.0 0.0 1029.329856062054 0.0 1029.329856062054 0.0 2.1966634691513143 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1549 + + 50 + 1 2.075 49441.2 0.4799999892711639 5352 3583 8919 DOHH2_400M_050219_1,8937 DOHH2_400M_050219_1,8937,HWECPCCY False False MMGHRPVLVL 51.098662 606.20958250761 258045.921875 8919.0 ENST00000472765.6_1_1:156307533-156307990:-|nuORF;;ENST00000368256.3_1_1:156302875-156308050:-|nuORF;;ENST00000533194.5_1_1:156303393-156308050:-|nuORF;;nc|ENSG00000163468|P49368-2|CCT3;;ENST00000489870.1_1_1:156305554-156307990:-|nuORF;;ENSG00000163468|ENST00000295688|CCT3 -0.2281373739242553 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8938 51.113 800.0 145060.0 25 0 18083.0 + 12777 GVPRRPRRLR 10 116 631.9063835286731 1261.7982141241462 2 631.9070922732353 MULTI CID FTMS 0 0 0 8919 92023.421875 1.0 0 0.0 19 Unmodified _GVPRRPRRLR_ REV__ENST00000357066.7_1_19:2085254-2096298:-|nuORF 1.6526216038709556 0.7189921496796233 1 DWT{I|L}P[DG]DY 9 -1 48.501 0.0 0.0 3.8438 0.0 0.0 181.34797105949616 0.0 181.34797105949616 0.0 32.19039598820905 0.0 0.0 0 0.0 0.0 1.7689301784845295 0.0 DWT{I|L}P[DG]DY 3.8438 - 582 + 1 2.075 91456.6 0.4699999988079071 5353 3583 8919 DOHH2_400M_050219_1,8938 DOHH2_400M_050219_1,8938,GVPRRPRRLR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8939 51.122 455.0 131400.0 25 0 7394.2 + 43232 WASERLWVA 9 107 559.2932081355674 1116.5718633379347 2 559.2922241091728 MULTI CID FTMS 0 0 0 8919 97790.75 1.0 0 0.0 20 Unmodified _WASERLWVA_ ENST00000399799.2_1_18:18691022-18691112:-|nuORF 32.78568957990786 0.1150597335874693 1 WAS 3 6 50.177 0.0 0.0 4.4939 0.0 0.0 0.0 769.3973482721311 769.3973482721311 28.081845230116205 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.4247425010840047 0.0 + WAS 4.4939 + + 49 + 1 2.075 52168.0 1.0 5354 3583 8919 DOHH2_400M_050219_1,8939 DOHH2_400M_050219_1,8939,WASERLWVA True True WASERLWVA 51.121754 559.2952 923911.8125 8919.0 ENST00000399799.2_1_18:18691022-18691112:-|nuORF 4.704540411631267 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8941 51.128 97.0 424620.0 25 0 25993.0 + 33026 SEPDFVAKFY 10 73 601.7901420063719 1201.5657310795436 2 601.7902099490166 MULTI CID FTMS 0 0 0 8940 340140.625 0.2289092257200382 1 -0.1324806213378906 1 Unmodified _SEPDFVAKFY_ ENSG00000179933|ENST00000319074|C14orf119 31.26834338654808 0.266153677697784 1 {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F}Y 10 0 + 57.652 0.0 0.0 4.798 4.798 88.865 0.0 0.0 0.0 -0.7648373010427179 13.037275116073346 -0.7648373010427179 57.65153777800478 0 0.3494850021680094 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F}Y 4.798 + + 281 + 1 2.075 35247.0 1.0 5355 3584 8940 DOHH2_400M_050219_1,8941 DOHH2_400M_050219_1,8941,SEPDFVAKFY False True SEPDFVAKFY 51.127737 601.790209949017 21077270.0 8940.0 ENSG00000179933|ENST00000319074|C14orf119 8.803446610768637 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8942 51.131 138.0 307520.0 25 0 60061.0 + -1 KKKKKMMIP 9 65 582.3531471308836 1162.691741328567 2 582.3534423708916 MULTI CID FTMS 0 0 0 8940 318296.75 0.3203741762994417 1 -0.1324806213378906 2 2 Oxidation (M) _KKKKKM(Oxidation (M))M(Oxidation (M))IP_ REV__ENSG00000047849|ENST00000683076|MAP4 0.6014990680409731 0.8936861360942873 1 W 1 -1 13.495 0.0 0.0 1.1607 0.0 0.0 958.6007817111828 0.0 958.6007817111828 0.0 13.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1607 - 6 + 1 2.075 41603.4 1.0 5356 3584 8940 DOHH2_400M_050219_1,8942 DOHH2_400M_050219_1,8942,KKKKKMMIP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8943 51.132 32.0 1742100.0 25 0 292390.0 + 5705 DPPLKFMSV 9 79 517.2814513798171 1032.548349826434 2 517.2733032107353 MULTI CID FTMS 0 0 0 8940 1683218.75 0.0230660443161306 -3 0.4164390563964844 3 Unmodified _DPKARRSFG_ ENSG00000169813|ENST00000682386|HNRNPF 12.174745833636583 0.5071271664557081 1 DPP[HT]{M(Oxidation (M))|F}P{I|L}G 9 6 61.872 0.0 0.0 5.9922 0.0 0.0 0.0 68.05140863590077 68.05140863590077 30.617515817243515 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 DPP[HT]{M(Oxidation (M))|F}P{I|L}G 5.9922 - 278 + 1 2.075 55357.9 1.0 5357 3584 8940 DOHH2_400M_050219_1,8943 DOHH2_400M_050219_1,8943,DPKARRSFG False False DPPLKFMSV 51.131708 517.273303210735 14264824.0 8940.0 ENSG00000169813|ENST00000682386|HNRNPF 5.454294204711914 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8944 51.133 37.0 2206900.0 25 0 221030.0 + 25451 NEIEDTFRQF 10 78 649.8038104848894 1297.5930680365786 2 649.8044921755791 MULTI CID FTMS 0 0 0 8940 1437266.0 0.0558529163194478 -2 0.2961769104003906 4 Unmodified _NEIEDTFRQF_ ENSG00000128524|ENST00000249289|ATP6V1F 107.09958533191995 0.0045178149581522 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F} 10 0 + 87.41 0.0 0.0 6.7363 6.7363 89.52 0.0 0.0 0.0 71.42391271599782 13.29245702317398 13.29245702317398 9.164539485499262 0 1.5 0.0 0.805462187404089 1.610924374808178 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}[VG]Q{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}R[AG]{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}[VG][AG]{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]DT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]DT{M(Oxidation (M))|F}[VG]Q{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ED[HK]{[MS]|[{M(Oxidation (M))|F}A]}[VP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]DT{M(Oxidation (M))|F}R[AG]{M(Oxidation (M))|F};[RH][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]T{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F};[RH][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]T{M(Oxidation (M))|F}[VG]Q{M(Oxidation (M))|F} 6.7363;6.03;5.7366;4.0851;3.7642;3.0579;3.0534;2.7645;2.6224;1.9128 +;-;-;-;-;-;-;-;-;- + 290 + 1 2.075 70111.5 1.0 5358 3584 8940 DOHH2_400M_050219_1,8944 DOHH2_400M_050219_1,8944,NEIEDTFRQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8945 51.135 71.0 411020.0 25 0 26222.0 -1 0 43 1010.8122124204092 3029.414807861428 3 1011.146960437298 MULTI CID FTMS 0 0 0 8940 863969.5625 0.9986625512768146 -1 0.1227684020996093 5 1 GT 2 -1 9.464 0.0 0.0 0.3124 0.0 0.0 1948.8974261249025 919.4108370416624 2868.3082631665648 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GT 0.3124 - 14 + 1 2.075 28664.1 1.0 5359 3584 8940 DOHH2_400M_050219_1,8945 DOHH2_400M_050219_1,8945, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8946 51.136 62.0 687980.0 25 0 79888.0 + 18048 KTDDLTMVLY 10 51 599.8049397939039 1197.5953266546078 2 599.8060180544853 MULTI CID FTMS 0 0 0 8940 659241.0 0.9963918560007072 -1 0.1227684020996093 6 Unmodified _KTDDLTMVLY_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 29.84058131909904 0.2982332456971691 1 TMV{I|L}Y 5 5 56.058 0.0 0.0 4.6809 0.0 0.0 572.2812367169937 0.0 572.2812367169937 0.0 45.08864383480216 0.0 0.0 0 1.0 0.0 1.3494850021680094 0.0 + TMV{I|L}Y 4.6809 + + 19 1 2.075 35917.7 1.0 5360 3584 8940 DOHH2_400M_050219_1,8946 DOHH2_400M_050219_1,8946,KTDDLTMVLY False True KTDDLTMVLY 51.136122 599.806018054485 5029456.0 8940.0 ENSG00000197969|ENST00000360280|VPS13A;;nc|ENSG00000197969|Q96RL7-2|VPS13A;;nc|ENSG00000197969|Q96RL7-4|VPS13A;;nc|ENSG00000197969|Q96RL7-3|VPS13A 9.144123077392578 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8947 51.139 147.0 670150.0 25 0 79385.0 + 36817 TEITDDLHFY 10 91 627.28764927495 1252.5607456167 2 627.2881347537041 MULTI CID FTMS 0 0 0 8940 475113.65625 1.0 0 0.0 7 Unmodified _TEITDDLHFY_ ENSG00000197157|ENST00000354725|SND1 61.357469665136826 0.0330252915653943 1 {[ET]|[MV]}{I|L}TDD{I|L}H{M(Oxidation (M))|F}Y 10 0 + 41.1 0.0 0.0 3.2812 3.2812 80.407 0.0 0.0 0.0 8.304227789092039 7.6582633479392115 7.6582633479392115 10.920050882549504 0 1.0 0.0 0.4247425010840047 0.0 + + {[ET]|[MV]}{I|L}TDD{I|L}H{M(Oxidation (M))|F}Y;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[DN][WP]{I|L}[DP];{[DA]|[EG]}AAH{I|L}DDT{I|L}[DP];{[ET]|[MV]}[DV]H{I|L}{M(Oxidation (M))|F}Y{[ET]|[MV]};[{I|L}T]DDH{I|L}{M(Oxidation (M))|F}Y{[ET]|[MV]};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}DDT{I|L}Y{[ET]|[MV]};[H{I|L}]DDT{I|L}{M(Oxidation (M))|F}Y{[ET]|[MV]};[PS][SG]H{I|L}DDT{I|L}[DP];{[ET]|[MV]}[DV]H{M(Oxidation (M))|F}{I|L}Y{[ET]|[MV]};[H{I|L}]DD{[NV]|[RG]}DT{I|L}[DP] 3.2812;2.4094;2.3914;2.3163;2.2504;2.1351;2.1208;2.1146;2.0759;2.0674 +;-;-;-;-;-;-;-;-;- + 592 + 1 2.075 79603.9 1.0 5361 3584 8940 DOHH2_400M_050219_1,8947 DOHH2_400M_050219_1,8947,TEITDDLHFY True True TEITDDLHFY 51.13907 627.288134753704 2735935.75 8940.0 ENSG00000197157|ENST00000354725|SND1 7.599400520324707 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8948 51.142 146.0 767370.0 25 0 114950.0 + -1 RADPEAGLLLY 11 60 609.3296934022329 1216.6448338712655 2 609.3303100466728 MULTI CID FTMS 0 0 0 8940 328205.1875 0.0662987275067396 -2 0.2961769104003906 8 Oxidation (M) _YM(Oxidation (M))SVLSLILY_ nc|ENSG00000138346|P51530-3|DNA2;ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2;nc|ENSG00000138346|P51530-2|DNA2 24.020572477871973 0.4289996903560794 1 S{I|L}{I|L}{I|L}Y 5 -1 48.628 0.0 0.0 3.9969 0.0 0.0 609.2838612287125 0.0 609.2838612287125 0.0 35.863605930594424 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 S{I|L}{I|L}{I|L}Y 3.9969 + + 53 1 2.075 89167.8 1.0 5362 3584 8940 DOHH2_400M_050219_1,8948 DOHH2_400M_050219_1,8948,YMSVLSLILY False False RADPEAGLLLY 51.142005 609.330310046673 79378520.0 8940.0 nc|ENSG00000138346|P51530-3|DNA2;;ENSG00000138346|ENST00000358410|DNA2;;nc|ENSG00000138346|P51530-4|DNA2;;nc|ENSG00000138346|P51530-2|DNA2 8.130452156066895 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8949 51.146 185.0 323220.0 25 0 19805.0 -1 0 82 881.4126494107194 1760.810745888239 2 881.9078857302666 MULTI CID FTMS 0 0 0 8940 312464.03125 0.011810988789571 7 -0.8833580017089844 9 1 [KT]QY{M(Oxidation (M))|F}ANQEA[CS]VC(Carbamidomethyl (C)){I|L} 15 -1 + 83.968 0.0 0.0 4.7687 4.7687 55.81 0.0 0.0 0.0 58.67722213736919 12.521786641354607 12.521786641354607 0.0 0 0.0 0.0 0.3054621874040891 1.1861818737241734 [KT]QY{M(Oxidation (M))|F}ANQEA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ANQEA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ANEQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ANEQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ANQEA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ANQEA[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}ADQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ANEQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ANEQA[CS]C(Carbamidomethyl (C))V{I|L} 4.7687;4.7687;4.5977;4.5977;4.4977;4.4977;4.4268;4.4268;4.3268;4.3268 -;-;-;-;-;-;-;-;-;- 4261 + 1 2.075 45549.4 1.0 5363 3584 8940 DOHH2_400M_050219_1,8949 DOHH2_400M_050219_1,8949, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8950 51.149 185.0 271580.0 25 0 33030.0 + 29426 QLEWDDSTLSY 11 87 678.801219583792 1355.587886234384 2 678.8016235232353 MULTI CID FTMS 0 0 0 8940 271453.875 1.0 0 0.0 10 Unmodified _QLEWDDSTLSY_ ENSG00000171603|ENST00000377298|CLSTN1;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;nc|ENSG00000171603|O94985-2|CLSTN1 93.16586880292088 0.000550602871346 1 [Q{I|L}]EWDD 6 5 44.288 0.0 0.0 3.2671 0.0 0.0 0.0 566.2496043342463 566.2496043342463 10.172203223519524 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.6307196863200843 1.1861818737241734 + [Q{I|L}]EWDD 3.2671 + + 229 1 2.075 45740.3 1.0 5364 3584 8940 DOHH2_400M_050219_1,8950 DOHH2_400M_050219_1,8950,QLEWDDSTLSY True True QLEWDDSTLSY 51.149199 678.801623523235 1840251.875 8940.0 nc|ENSG00000171603|O94985-2|CLSTN1;;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;;ENSG00000171603|ENST00000377298|CLSTN1 8.755167802174887 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8951 51.153 206.0 416830.0 25 0 21010.0 + 25541 NESAIFHGW 9 113 530.7456847091204 1059.476816485041 2 530.7462036013603 MULTI CID FTMS 0 0 0 8940 237053.578125 0.7196804919589328 -1 0.1227684020996093 11 Unmodified _NESAIFHGW_ ENSG00000213380|ENST00000306875|COG8 81.86404211737425 0.017065112157077 1 {[{M(Oxidation (M))|F}H]|[RQ]}N{M(Oxidation (M))|F}{I|L}AS 7 8 49.174 0.0 0.0 4.6413 0.0 0.0 0.0 240.06182739322256 240.06182739322256 35.594880513969414 0.0 0.0 0.0 0 0.6989700043360187 1.0457574905606752 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}N{M(Oxidation (M))|F}{I|L}AS 4.6413 - 527 1 2.075 65940.5 1.0 5365 3584 8940 DOHH2_400M_050219_1,8951 DOHH2_400M_050219_1,8951,NESAIFHGW True True NESAIFHGW 51.153126 530.74620360136 2189477.25 8940.0 ENSG00000213380|ENST00000306875|COG8 8.016082763671875 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8952 51.158 245.0 330320.0 25 0 25450.0 + 5516 DLYKRFIL 8 97 534.3152822000595 1066.616011466919 2 534.3156005740166 MULTI CID FTMS 0 0 0 8940 168765.671875 1.0 0 0.0 12 Unmodified _DLYKRFIL_ ENSG00000152422|ENST00000396027|XRCC4;ENST00000509268.1_1_5:82400738-82554497:+|nuORF;ENST00000542685.5_1_5:82400738-82606644:+|nuORF;nc|ENSG00000152422|Q13426-3|XRCC4;nc|ENSG00000152422|Q13426|XRCC4 23.1484247019978 0.5573009939494978 1 D{I|L}K{M(Oxidation (M))|F}{I|L}{I|L}RY 8 4 + 65.276 0.0 0.0 6.1199 6.1199 90.949 0.0 0.0 0.0 46.33593778117195 6.127815773883327 6.127815773883327 13.81549592483868 0 0.3494850021680094 2.0 0.0 0.0 D{I|L}K{M(Oxidation (M))|F}{I|L}{I|L}RY;D{I|L}YK{I|L}[R{M(Oxidation (M))|F}]{I|L};D{I|L}K{M(Oxidation (M))|F}{I|L}[YR]{I|L};D{I|L}KY{I|L}[R{M(Oxidation (M))|F}]{I|L};D{I|L}YK{I|L}[{I|L}V]{[CT]|[{M(Oxidation (M))|F}G]};D{I|L}KY{I|L}[{I|L}V]{[CT]|[{M(Oxidation (M))|F}G]};D{I|L}K[WK][HK]{I|L};D{I|L}KKK[WH]{I|L} 6.1199;4.8247;4.4945;4.3773;4.2711;3.8238;3.4661;3.1838 -;-;-;-;-;-;-;- 312 + 1 2.075 64031.8 1.0 5366 3584 8940 DOHH2_400M_050219_1,8952 DOHH2_400M_050219_1,8952,DLYKRFIL False True DLYKRFIL 51.157712 534.315600574017 841240.625 8940.0 ENST00000509268.1_1_5:82400738-82554497:+|nuORF;;nc|ENSG00000152422|Q13426|XRCC4;;ENSG00000152422|ENST00000396027|XRCC4;;nc|ENSG00000152422|Q13426-3|XRCC4;;ENST00000542685.5_1_5:82400738-82606644:+|nuORF 2.731202165285746 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8953 51.172 800.0 171080.0 25 0 9229.7 + 5939 IVDEVNGLISMY 12 145 684.8392141207685 1367.6638753083369 2 684.8395873904228 MULTI CID FTMS 0 0 0 8940 150178.171875 0.7149059563576805 -3 0.4164390563964844 13 Unmodified _DQERVWRPPEG_ nc|ENSG00000108883|Q15029-3|EFTUD2;nc|ENSG00000108883|Q15029-2|EFTUD2;ENSG00000108883|ENST00000426333|EFTUD2 43.9818466556824 0.1510575460884947 1 [Y{I|L}][HD]{I|L}VV{I|L}S{M(Oxidation (M))|F}Y 11 11 + 62.484 0.0 0.0 4.5686 4.5686 75.012 0.0 0.0 0.0 31.523952732471976 2.794023012360988 2.794023012360988 2.385606273598313 0 0.4247425010840047 0.0 1.4035984316004222 0.0 [Y{I|L}][HD]{I|L}VV{I|L}S{M(Oxidation (M))|F}Y;[Y{I|L}][HD]{I|L}V{I|L}VS{M(Oxidation (M))|F}Y;[Y{I|L}][HD]V{I|L}V{I|L}S{M(Oxidation (M))|F}Y;[Y{I|L}][HD]V{I|L}{I|L}VS{M(Oxidation (M))|F}Y;[Y{I|L}][HD]{I|L}V{I|L}YS[{M(Oxidation (M))|F}V];[WC(Carbamidomethyl (C))]{I|L}{I|L}[PA]V{I|L}S{M(Oxidation (M))|F}Y;[Y{I|L}][HD]V{I|L}{I|L}YS[{M(Oxidation (M))|F}V];[Y{I|L}][HD]{I|L}VV[YT][{M(Oxidation (M))|F}V];[Y{I|L}][HD]{I|L}V[W{I|L}]{M(Oxidation (M))|F}Y;[Y{I|L}][HD]{I|L}V{I|L}[HM]NN 4.5686;4.3942;4.0663;3.8919;3.1952;2.7024;2.6929;2.3924;2.2763;1.9824 -;-;-;-;-;-;-;-;-;- 5862 + 1 2.075 104236.3 0.6600000262260437 5367 3584 8940 DOHH2_400M_050219_1,8953 DOHH2_400M_050219_1,8953,DQERVWRPPEG False True IVDEVNGLISMY 51.171549 684.839587390423 5077860.5 8940.0 nc|ENSG00000108883|Q15029-3|EFTUD2;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 7.062610944112142 2.0 False 12.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8954 51.175 184.0 320700.0 25 0 41330.0 + 24510 MIPIQVPVE 9 94 513.2876577818579 1024.5607626305157 2 513.2875854372978 MULTI CID FTMS 0 0 0 8940 115268.046875 0.3403270447888106 -2 0.2961769104003906 14 Unmodified _MIPIQVPVE_ REV__ENSG00000126733|ENST00000373125|DACH2;REV__nc|ENSG00000126733|Q96NX9-2|DACH2;REV__nc|ENSG00000126733|Q96NX9-3|DACH2;REV__nc|ENSG00000126733|Q96NX9-4|DACH2 16.942295170755138 0.3780752226737986 1 VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}M 7 -1 41.481 0.0 0.0 4.0487 0.0 0.0 0.0 207.11423669986564 207.11423669986564 28.764278154354525 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.4247425010840047 VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}M 4.0487 - 387 + 1 2.075 52697.6 1.0 5368 3584 8940 DOHH2_400M_050219_1,8954 DOHH2_400M_050219_1,8954,MIPIQVPVE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8955 51.183 440.0 175140.0 25 0 13281.0 16809 KGPHLRSKQL 10 120 388.57123075687446 0 388.5710327029228 PEAK CID FTMS 0 0 0 8940 106353.171875 0.3905917279013872 1 -0.1324806213378906 15 Unmodified _KGPHLRSKQL_ chr1:159836212-159837085|21|15.52|0.11|7.14|+|2|None,SLAMF8|1 3.5964929083625545 0.3961065659209837 1 M 1 10 3.9794 0.0 0.0 0.51339 0.0 0.0 386.91988353347705 254.1407259576781 641.0606094911552 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.51339 - 3 + 1 2.075 68385.8 1.0 5369 3584 8940 DOHH2_400M_050219_1,8955 DOHH2_400M_050219_1,8955,KGPHLRSKQL False False False False splicing PXD020620_cell_line DOHH2_400M_050219_1 8956 51.197 800.0 89612.0 25 0 9246.9 + -1 KENGADIFLY 10 108 585.2949431779879 1168.5753334227757 2 585.2949706912041 MULTI CID FTMS 0 0 0 8940 91163.2734375 1.0 0 0.0 16 Carbamidomethyl (C) _FLGHC(Carbamidomethyl (C))IFIY_ ENSG00000115760|ENST00000421745|BIRC6 36.46614268402704 0.0948557732959553 1 {I|L}{M(Oxidation (M))|F}{I|L}Y 4 -1 35.662 0.0 0.0 3.0517 0.0 0.0 614.2662831037125 0.0 614.2662831037125 0.0 21.682437647924218 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}{I|L}Y 3.0517 + + 43 1 2.075 59087.0 0.5 5370 3584 8940 DOHH2_400M_050219_1,8956 DOHH2_400M_050219_1,8956,FLGHCIFIY False False KENGADIFLY 51.196757 585.294970691204 540572.6875 8940.0 ENSG00000115760|ENST00000421745|BIRC6 3.4930516878763838 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8957 51.212 800.0 82298.0 25 0 14617.0 + -1 ELKIKVVQCLL 11 89 671.9114422014719 1341.8083314697435 2 671.9118530154228 MULTI CID FTMS 0 0 0 8940 129712.6875 1.0 0 0.0 17 Carbamidomethyl (C) _ELKIKVVQC(Carbamidomethyl (C))LL_ REV__ENSG00000118900|ENST00000262376|UBN1;REV__nc|ENSG00000118900|Q9NPG3-2|UBN1 1.0714618166137932 0.8700927088084459 1 Y 1 -1 11.99 0.0 0.0 0.89355 0.0 0.0 1160.733866603336 0.0 1160.733866603336 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.89355 - 54 + 1 2.075 60003.6 0.6299999952316284 5371 3584 8940 DOHH2_400M_050219_1,8957 DOHH2_400M_050219_1,8957,ELKIKVVQCLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8958 51.226 800.0 97188.0 25 0 9266.9 + 17447 KNQALLEL 8 117 464.7763452034103 927.5381374736206 2 464.7761413455009 MULTI CID FTMS 0 0 0 8940 120527.5546875 0.8378818839255785 1 -0.1324806213378906 18 Unmodified _KNQALLEL_ REV__ENSG00000046651|ENST00000340096|OFD1;REV__ENST00000490265.5_1_X:13771424-13787224:+|nuORF;REV__nc|ENSG00000046651|O75665-3|OFD1 26.88365393820708 0.4786498634179528 1 {[QN]|[E{I|L}]|[KN]}RR{I|L}E{I|L} 7 -1 + 42.508 0.0 0.0 4.5829 4.5829 86.51 0.0 0.0 0.0 11.010519215950085 25.57274160397888 11.010519215950085 20.57991946977687 0 0.3054621874040891 1.0457574905606752 0.0 0.0 {[QN]|[E{I|L}]|[KN]}RR{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]{I|L}{I|L}E{I|L} 4.5829;2.3642 -;- 58 1 2.075 65720.8 0.4799999892711639 5372 3584 8940 DOHH2_400M_050219_1,8958 DOHH2_400M_050219_1,8958,KNQALLEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8959 51.239 800.0 39883.0 25 0 6711.5 -1 0 47 1063.8430869345284 3188.5074314037856 3 1064.515185534954 MULTI CID FTMS 0 0 0 8940 112897.984375 1.0 0 0.0 19 1 ST 2 -1 7.9588 0.0 0.0 0.24961 0.0 0.0 2218.066099471948 779.3541353815061 2997.420234853454 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ST 0.24961 - 27 + 1 2.075 29816.9 0.5299999713897705 5373 3584 8940 DOHH2_400M_050219_1,8959 DOHH2_400M_050219_1,8959, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8960 51.254 800.0 104590.0 25 0 10374.0 + + -1 GSDVEHNPVFFSY 13 107 749.3348154948173 1496.6550780564346 2 749.8376342654228 MULTI CID FTMS 0 0 0 8940 107045.859375 1.0 0 0.0 20 Carbamidomethyl (C) _FFFC(Carbamidomethyl (C))HVSFPYF_ nc|ENSG00000108039|Q9NQW7-2|XPNPEP1;ENST00000513817.5_1_10:111637546-111643934:-|nuORF;ENSG00000108039|ENST00000502935|XPNPEP1;nc|ENSG00000108039|Q9NQW7|XPNPEP1;ENST00000472336.5_1_10:111635284-111643934:-|nuORF;nc|ENSG00000108039|Q9NQW7-4|XPNPEP1;ENST00000488118.6_1_10:111637546-111648351:-|nuORF 3.5964929083625545 0.858179447565866 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VW{M(Oxidation (M))|F}{M(Oxidation (M))|F}SY 12 -1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VW{M(Oxidation (M))|F}{M(Oxidation (M))|F} + + 24.464 27.285 2.2209 1.6346 1.6346 48.629 0.0 0.0 0.0 0.0 -0.4929129842395596 -0.4929129842395596 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VW{M(Oxidation (M))|F}{M(Oxidation (M))|F}SY 1.6346 - 1962 + 1 2.075 63014.6 0.550000011920929 5374 3584 8940 DOHH2_400M_050219_1,8960 DOHH2_400M_050219_1,8960,FFFCHVSFPYF False False GSDVEHNPVFFSY 51.254467 749.837634265423 1009180.5625 8940.0 nc|ENSG00000108039|Q9NQW7-2|XPNPEP1;;ENST00000513817.5_1_10:111637546-111643934:-|nuORF;;ENSG00000108039|ENST00000502935|XPNPEP1;;nc|ENSG00000108039|Q9NQW7|XPNPEP1;;ENST00000472336.5_1_10:111635284-111643934:-|nuORF;;nc|ENSG00000108039|Q9NQW7-4|XPNPEP1;;ENST00000488118.6_1_10:111637546-111648351:-|nuORF 4.182952721913655 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8962 51.263 242.0 487950.0 25 0 44664.0 -1 0 74 915.442024762134 1828.869496591068 2 914.9361450076104 MULTI CID FTMS 0 0 0 8961 359502.84375 0.795659581290224 -1 0.1324806213378906 1 1 VEY{M(Oxidation (M))|F}ANQQAE[EP]C(Carbamidomethyl (C)){I|L} 14 -1 87.19 0.0 0.0 4.7674 0.0 0.0 132.10115039449812 0.0 132.10115039449812 0.0 74.00260426274315 0.0 0.0 0 0.0 0.0 0.0 1.1307196863200843 VEY{M(Oxidation (M))|F}ANQQAE[EP]C(Carbamidomethyl (C)){I|L} 4.7674 - 1480 + 1 2.058 85074.7 1.0 5375 3585 8961 DOHH2_400M_050219_1,8962 DOHH2_400M_050219_1,8962, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8963 51.276 800.0 68565.0 25 0 14426.0 45185 YQRLLLEKRQR 11 79 751.9481657166449 1501.8817785000897 2 751.9493896365166 MULTI CID FTMS 0 0 0 8961 93536.9296875 0.7860917611200904 2 -0.1963844299316406 2 Unmodified _YQRLLLEKRQR_ ENSG00000078246|ENST00000448120|TULP3;nc|ENSG00000078246|O75386-2|TULP3;nc|ENSG00000078246|O75386-3|TULP3 0.3070304955306653 0.8736993455979228 1 {M(Oxidation (M))|F} 1 11 10.0 0.0 0.0 0.66583 0.0 0.0 1336.8024308211818 0.0 1336.8024308211818 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.66583 - 44 + 1 2.058 45952.9 0.5699999928474426 5376 3585 8961 DOHH2_400M_050219_1,8963 DOHH2_400M_050219_1,8963,YQRLLLEKRQR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8965 51.281 45.0 1284800.0 25 0 131060.0 + 25494 NELPGLKW 8 75 478.7636439321211 955.5127349310422 2 478.7637817263603 MULTI CID FTMS 0 0 0 8964 1293465.375 0.24671414125683 2 -0.3207435607910156 1 Unmodified _NELPGLKW_ ENSG00000037474|ENST00000264670|NSUN2;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 48.345845343767074 0.1470278396477103 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[PG]{I|L}KW 8 0 + 29.174 0.0 0.0 3.0532 3.0532 82.713 0.0 0.0 0.0 11.62720371701701 6.73902187720806 6.73902187720806 29.17403451429223 0 0.9247425010840048 0.0 0.0 0.2302046884880938 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[PG]{I|L}KW 3.0532 + + 74 + 1 2.058 50090.8 1.0 5377 3586 8964 DOHH2_400M_050219_1,8965 DOHH2_400M_050219_1,8965,NELPGLKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8966 51.282 47.0 1098000.0 25 0 69143.0 + 12347 GTDELRLLY 9 79 540.2900254963683 1078.5654980595366 2 540.2903320193291 MULTI CID FTMS 0 0 0 8964 1272239.875 0.2880800863352717 2 -0.3207435607910156 2 Unmodified _GTDELRLLY_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 49.55428908609986 0.0413471690215031 1 {[SA]|[TG]}DE{I|L}R{I|L}{I|L}Y 9 0 + 65.283 0.0 0.0 6.0528 6.0528 92.472 0.0 0.0 0.0 60.67918449261214 16.478174818886373 16.478174818886373 27.16190326687972 0 1.242992819099939 1.6989700043360187 0.0 0.0 + + {[SA]|[TG]}DE{I|L}R{I|L}{I|L}Y;{[SA]|[TG]}RR[WQ]{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}]{[SA]|[TG]}{I|L}{I|L}Y;VV[WE]{[SA]|[TG]}{I|L}{I|L}Y 6.0528;3.5345;2.2849;1.6646 +;-;-;- + 53 + 1 2.058 46606.3 1.0 5378 3586 8964 DOHH2_400M_050219_1,8966 DOHH2_400M_050219_1,8966,GTDELRLLY True True GTDELRLLY 51.282305 540.290332019329 24308440.0 8964.0 ENSG00000001497|ENST00000374811|LAS1L;;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 7.931865692138672 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8967 51.285 140.0 362480.0 25 0 25596.0 -1 0 63 1029.8307320796832 3086.47036683925 3 1030.166186511517 MULTI CID FTMS 0 0 0 8964 751632.75 0.3517856756315608 2 -0.3207435607910156 3 1 [MN]MV 4 -1 40.005 0.0 0.0 1.2961 0.0 0.0 0.0 2608.201174681752 2608.201174681752 27.604898697608707 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [MN]MV 1.2961 - 256 + 1 2.058 41148.2 1.0 5379 3586 8964 DOHH2_400M_050219_1,8967 DOHH2_400M_050219_1,8967, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8968 51.287 106.0 663680.0 25 0 50323.0 + 4835 DFKIRTIEL 9 106 567.8296150737922 1133.6446772143845 2 567.8300048708916 MULTI CID FTMS 0 0 0 8964 596749.25 1.0 0 0.0 4 Unmodified _DFKIRTIEL_ ENSG00000138069|ENST00000409784|RAB1A;ENSG00000166128|ENST00000321437|RAB8B;ENSG00000167461|ENST00000300935|RAB8A;ENSG00000174903|ENST00000311481|RAB1B;ENST00000342609.6_1_2:191857981-191858245:-|nuORF;ENST00000587156.5_1_19:16222711-16238468:+|nuORF;ENST00000589697.1_1_19:16222732-16236504:+|nuORF;ENST00000590899.5_1_19:16222711-16232755:+|nuORF;nc|ENSG00000138069|P62820-3|RAB1A;nc|ENSG00000167461|P61006-2|RAB8A 35.61225514009592 0.0995432151795903 1 D{M(Oxidation (M))|F}K[KT]SGRE 9 6 51.437 0.0 0.0 4.5373 0.0 0.0 0.0 82.06699548892811 82.06699548892811 25.06216506865218 0.0 0.0 0.0 0 0.2887254899964357 0.9208187539523752 0.2887254899964357 0.2887254899964357 D{M(Oxidation (M))|F}K[KT]SGRE 4.5373 - 520 + 1 2.058 57828.8 1.0 5380 3586 8964 DOHH2_400M_050219_1,8968 DOHH2_400M_050219_1,8968,DFKIRTIEL True True DFKIRTIEL 51.287425 567.830004870892 3623840.25 8964.0 nc|ENSG00000138069|P62820-3|RAB1A;;nc|ENSG00000167461|P61006-2|RAB8A;;ENSG00000174903|ENST00000311481|RAB1B;;ENST00000342609.6_1_2:191857981-191858245:-|nuORF;;ENST00000590899.5_1_19:16222711-16232755:+|nuORF;;ENST00000589697.1_1_19:16222732-16236504:+|nuORF;;ENST00000587156.5_1_19:16222711-16238468:+|nuORF;;ENSG00000138069|ENST00000409784|RAB1A;;ENSG00000166128|ENST00000321437|RAB8B;;ENSG00000167461|ENST00000300935|RAB8A 4.361505031585693 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8969 51.29 122.0 423890.0 25 0 49159.0 + 45508 YTSDYFISY 9 82 579.753072096793 1157.4915912603858 2 579.7533447146416 MULTI CID FTMS 0 0 0 8964 457280.34375 0.0692910527737765 3 -0.5275344848632812 5 Unmodified _YTSDYFISY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 36.04419817259434 0.0971720506436186 1 Y{M(Oxidation (M))|F}TD[MT] 6 7 24.9 0.0 0.0 2.1512 0.0 0.0 381.188870168392 0.0 381.188870168392 0.0 3.4729593083313404 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 Y{M(Oxidation (M))|F}TD[MT] 2.1512 - 168 + 1 2.058 44486.4 1.0 5381 3586 8964 DOHH2_400M_050219_1,8969 DOHH2_400M_050219_1,8969,YTSDYFISY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8970 51.304 787.0 166640.0 25 0 15615.0 + 25454 NEIEDTFRQF 10 160 433.538540953518 1297.593793460754 3 433.5385314822197 MULTI CID FTMS 0 0 0 8964 358108.5625 1.0 0 0.0 6 Unmodified _NEIEDTFRQF_ ENSG00000128524|ENST00000249289|ATP6V1F 83.42873516780209 0.014257832770272 1 {[QN]|[E{I|L}]|[KN]}NEDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F} 10 2 {[QN]|[E{I|L}]|[KN]}NE + + 58.18 26.584 5.4789 4.4837 4.4837 54.789 0.0 0.0 0.0 0.0 16.25363573598407 0.0 0.0 0 0.7742275032520141 0.0 0.5 1.579689690656103 {[QN]|[E{I|L}]|[KN]}NEDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F} 4.4837 - 844 + 1 2.058 106427.1 1.0 5382 3586 8964 DOHH2_400M_050219_1,8970 DOHH2_400M_050219_1,8970,NEIEDTFRQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8971 51.308 253.0 342380.0 25 0 43765.0 + 4836 DFKIRTIEL 9 96 378.8888513055064 1133.6447245167192 3 378.8886596560478 MULTI CID FTMS 0 0 0 8964 339009.65625 1.0 0 0.0 7 Unmodified _DFKIRTIEL_ ENSG00000138069|ENST00000409784|RAB1A;ENSG00000166128|ENST00000321437|RAB8B;ENSG00000167461|ENST00000300935|RAB8A;ENSG00000174903|ENST00000311481|RAB1B;ENST00000342609.6_1_2:191857981-191858245:-|nuORF;ENST00000587156.5_1_19:16222711-16238468:+|nuORF;ENST00000589697.1_1_19:16222732-16236504:+|nuORF;ENST00000590899.5_1_19:16222711-16232755:+|nuORF;nc|ENSG00000138069|P62820-3|RAB1A;nc|ENSG00000167461|P61006-2|RAB8A 16.149105407346934 0.3995459350917656 1 {[QN]|[E{I|L}]|[KN]}[K{I|L}]KE{[{M(Oxidation (M))|F}D]|MM}{I|L} 9 6 + 27.425 0.0 0.0 2.4192 2.4192 66.105 0.0 0.0 0.0 0.9151498112134996 7.275071725447407 0.9151498112134996 0.0443219174010778 0 0.7302046884880937 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[K{I|L}]KE{[{M(Oxidation (M))|F}D]|MM}{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]EK{[{M(Oxidation (M))|F}D]|MM}{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]K{[{M(Oxidation (M))|F}D]|MM}E{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]TR{[{M(Oxidation (M))|F}D]|MM}{I|L};[VP][R{M(Oxidation (M))|F}]{I|L}K{[{M(Oxidation (M))|F}D]|MM}{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}][YN]{I|L}E{I|L} 2.4192;2.4153;2.1537;1.9944;1.8391;1.7289 -;-;-;-;-;- 173 1 2.058 73237.0 1.0 5383 3586 8964 DOHH2_400M_050219_1,8971 DOHH2_400M_050219_1,8971,DFKIRTIEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8972 51.312 175.0 457560.0 25 0 92256.0 + 25467 NEIVSVIWYQF 11 69 699.356327007488 1396.6981010817758 2 699.3567382693291 MULTI CID FTMS 0 0 0 8964 284821.6875 0.9940359765286818 1 -0.1743659973144531 8 Unmodified _NEIVSVIWYQF_ REV__ENSG00000198879|ENST00000397167|SFMBT2 21.53697664764585 0.586507868110548 1 [WR]{I|L}EDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F} 10 -1 + 60.844 0.0 0.0 4.3563 4.3563 76.532 0.0 0.0 0.0 40.37547473457904 9.521511452236725 9.521511452236725 3.979400086720375 0 0.0 0.0 0.3807196863200844 1.0941876774005248 [WR]{I|L}EDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F};[WR]{I|L}ED{M(Oxidation (M))|F}TRQ{M(Oxidation (M))|F};[WR]{I|L}EDT{M(Oxidation (M))|F}R[AG]{M(Oxidation (M))|F};[WR]{I|L}ED{M(Oxidation (M))|F}TR[AG]{M(Oxidation (M))|F} 4.3563;4.0714;3.4934;3.2085 -;-;-;- 557 + 1 2.058 62449.5 1.0 5384 3586 8964 DOHH2_400M_050219_1,8972 DOHH2_400M_050219_1,8972,NEIVSVIWYQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8973 51.315 177.0 330230.0 25 0 28603.0 + 10288 FRPPNPWTM 9 85 573.281438227439 1144.548323521678 2 573.2820312380791 MULTI CID FTMS 0 0 0 8964 244472.546875 0.6291795394602764 -1 0.0220184326171875 9 Unmodified _FRPPNPWTM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 57.72198328787511 0.0273433238377839 1 [WP]T{[QV]|[N{I|L}]|[RA]|[KV]}PWTM 9 4 + 50.881 0.0 0.0 4.4455 4.4455 71.912 0.0 0.0 0.0 3.895840698002999 1.2371250542002343 1.2371250542002343 0.4575749056067479 0 1.1549471895720984 1.3010299956639813 0.0 0.0 [WP]T{[QV]|[N{I|L}]|[RA]|[KV]}PWTM;[WP]TG{[VA]|[{I|L}G]}PWTM;[WP]T{[QV]|[N{I|L}]|[RA]|[KV]}PWCE;{M(Oxidation (M))|F}M{[SA]|[TG]}P{[QV]|[N{I|L}]|[RA]|[KV]}T[HQ];{M(Oxidation (M))|F}M{[SA]|[TG]}P{[VA]|[{I|L}G]}GT[HQ];[R{M(Oxidation (M))|F}]P[NP]PWTM;[WP]T{[QV]|[N{I|L}]|[RA]|[KV]}P{[SA]|[TG]}EM;[WP]T{[QV]|[N{I|L}]|[RA]|[KV]}P{[DA]|[EG]}TM;[R{M(Oxidation (M))|F}]P[NP]P{[SA]|[TG]}EM;[R{M(Oxidation (M))|F}]P[NP]P{[SA]|[TG]}ME 4.4455;4.4055;4.3374;4.1051;4.069;3.9691;3.8655;3.641;3.3891;3.2811 -;-;-;-;-;+;-;-;-;- + 333 1 2.058 49474.5 1.0 5385 3586 8964 DOHH2_400M_050219_1,8973 DOHH2_400M_050219_1,8973,FRPPNPWTM True True FRPPNPWTM 51.315104 573.282031238079 6209818.5 8964.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 9.286598841349283 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8974 51.322 403.0 301640.0 25 0 26711.0 + -1 FSETTPHCGSG 11 153 590.2381448887213 1178.4617368442423 2 590.2391845583916 MULTI CID FTMS 0 0 0 8964 211584.125 1.0 0 0.0 10 Carbamidomethyl (C) _FSETTPHC(Carbamidomethyl (C))GSG_ REV__ENSG00000154743|ENST00000284995|TSEN2;REV__ENST00000490981.1_1_3:12545028-12546775:+|nuORF;REV__nc|ENSG00000154743|Q8NCE0-2|TSEN2;REV__nc|ENSG00000154743|Q8NCE0-3|TSEN2;REV__nc|ENSG00000154743|Q8NCE0-5|TSEN2 8.155526934196011 0.8366696279279818 1 [{I|L}A]D 3 -1 23.301 0.0 0.0 1.9772 0.0 0.0 0.0 876.2903973684266 876.2903973684266 7.449820664543694 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]D 1.9772 - 1413 1 2.058 93106.8 1.0 5386 3586 8964 DOHH2_400M_050219_1,8974 DOHH2_400M_050219_1,8974,FSETTPHCGSG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8975 51.332 528.0 245470.0 25 0 26016.0 + 19191 LEFIKEIGY 9 126 556.3053613478476 1110.596169762495 2 556.3058349490166 MULTI CID FTMS 0 0 0 8964 167365.34375 1.0 0 0.0 11 Unmodified _LEFIKEIGY_ ENSG00000049541|ENST00000055077|RFC2;ENST00000485545.5_2_7:73646438-73651717:-|nuORF;nc|ENSG00000049541|P35250-2|RFC2 79.59630418116434 0.0176145593575188 1 {I|L}E[HT]{I|L}KEE{I|L} 9 5 + 80.16 0.0 0.0 7.2178 7.2178 81.568 0.0 0.0 0.0 38.70432232734536 4.314178132293449 4.314178132293449 0.9370405245622492 0 1.5356668758921828 2.0 1.7971062485323517 0.0 {I|L}E[HT]{I|L}KEE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}K{I|L}GYE{I|L};{I|L}E[HT]K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}KGYE{I|L};{I|L}E{M(Oxidation (M))|F}{I|L}[YG]KE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}K{I|L}E[YG]{I|L};{[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}{I|L}GYE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}KE[YG]{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}KE{I|L}[YG]{I|L};{[QN]|[E{I|L}]|[KN]}K[HT]{I|L}EE{I|L} 7.2178;7.1334;6.8956;6.8112;6.72;6.4885;6.3622;6.1663;6.1267;6.0728 -;-;-;-;-;-;-;-;-;- 4807 + 1 2.058 101950.5 1.0 5387 3586 8964 DOHH2_400M_050219_1,8975 DOHH2_400M_050219_1,8975,LEFIKEIGY True True LEFIKEIGY 51.331615 556.305834949017 790714.5 8964.0 ENST00000485545.5_2_7:73646438-73651717:-|nuORF;;ENSG00000049541|ENST00000055077|RFC2;;nc|ENSG00000049541|P35250-2|RFC2 5.265368302663167 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8976 51.345 800.0 145470.0 25 0 5162.7 + -1 TLITGLEEY 9 130 1037.975360810295 2073.93616868739 2 1038.477954089642 MULTI CID FTMS 0 0 0 8964 151439.96875 1.0 0 0.0 12 nc|ENSG00000204463|P46379|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-2|BAG6;ENST00000462875.1_1_6:31609234-31609708:-|nuORF;ENSG00000204463|ENST00000676615|BAG6 1 GD{I|L}ST{[CP]|[EA]}EE{I|L}E[KP] 13 -1 42.218 0.0 0.0 2.0356 0.0 0.0 657.2790840598096 0.0 657.2790840598096 0.0 9.099213059551516 0.0 0.0 0 0.5 0.0 1.841129063296272 0.3807196863200844 GD{I|L}ST{[CP]|[EA]}EE{I|L}E[KP] 2.0356 - 32002 + 1 2.058 81504.7 0.6200000047683716 5388 3586 8964 DOHH2_400M_050219_1,8976 DOHH2_400M_050219_1,8976, False False TLITGLEEY 51.345479 1037.9769 3951686.25 8964.0 nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000204463|P46379-5|BAG6;;nc|ENSG00000204463|P46379-4|BAG6;;nc|ENSG00000204463|P46379-2|BAG6;;ENST00000462875.1_1_6:31609234-31609708:-|nuORF;;ENSG00000204463|ENST00000676615|BAG6 2.962128162384033 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8977 51.354 417.0 77125.0 25 0 9059.4 + -1 LISFCCMHFCK 11 67 723.3164750379696 1444.618397142739 2 723.3168823122978 MULTI CID FTMS 0 0 0 8964 147325.296875 1.0 0 0.0 13 2 Carbamidomethyl (C) _LISFC(Carbamidomethyl (C))CMHFC(Carbamidomethyl (C))K_ REV__ENST00000474195.1_1_2:238680645-238680966:+|nuORF 3.2813086475875832 0.8596665074481906 1 AY 2 -1 20.969 0.0 0.0 1.4515 0.0 0.0 1192.5068190572244 0.0 1192.5068190572244 0.0 -2.4865124202832334 -2.4865124202832334 0.0 0 0.0 0.0 0.0 0.0 AY 1.4515 - 57 + 1 2.058 31939.9 1.0 5389 3586 8964 DOHH2_400M_050219_1,8977 DOHH2_400M_050219_1,8977,LISFCCMHFCK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8978 51.368 800.0 169910.0 25 0 10723.0 -1 0 136 666.3398706247776 1995.9977824745329 3 666.6750366091728 MULTI CID FTMS 0 0 0 8964 143025.359375 0.7165612068596379 1 -0.1743659973144531 14 1 {I|L}H{I|L}Q{[CP]|[EA]} 6 -1 30.813 0.0 0.0 1.5437 0.0 0.0 1286.5942762053098 0.0 1286.5942762053098 0.0 11.88499306263062 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 {I|L}H{I|L}Q{[CP]|[EA]} 1.5437 - 542 1 2.058 108877.8 0.6200000047683716 5390 3586 8964 DOHH2_400M_050219_1,8978 DOHH2_400M_050219_1,8978, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8979 51.382 800.0 153700.0 25 0 11779.0 -1 0 129 951.9527304037877 1901.890907874375 2 951.9513427615166 MULTI CID FTMS 0 0 0 8964 122327.8671875 1.0 0 0.0 15 1 {[QV]|[N{I|L}]|[RA]|[KV]}Y{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 108.41 0.0 0.0 5.7 5.7 59.162 0.0 0.0 0.0 9.42694164859934 15.447541561878964 9.42694164859934 0.0 0 0.7302046884880937 1.6989700043360187 0.0 2.603917193908117 {[QV]|[N{I|L}]|[RA]|[KV]}Y{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))Q][YN]QQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))Q][YN]QQNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[DS]|[MA]|[CV]|TT}EA[AG]QNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[DS]|[MA]|[CV]|TT}EAQ[AG]NA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[DS]|[MA]|[CV]|TT}EAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[DS]|[MA]|[CV]|TT}EAQQGGA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[DS]|[MA]|[CV]|TT}EAQQGGA{M(Oxidation (M))|F}YQV{I|L} 5.7;5.7;5.542;5.542;5.226;5.226;5.226;5.226;5.226;5.226 -;-;-;-;-;-;-;-;-;- 10232 1 2.058 83336.4 0.5699999928474426 5391 3586 8964 DOHH2_400M_050219_1,8979 DOHH2_400M_050219_1,8979, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8980 51.395 672.0 218630.0 25 0 25615.0 21112 LPALSRDLL 9 155 499.3060091239543 0 499.3053161501884 PEAK CID FTMS 0 0 0 8964 103941.59375 0.5824969536574149 -1 0.0220184326171875 16 Unmodified _LPALSRDLL_ ENST00000291295.13_1_19:47112759-47113158:+|nuORF 49.55428908609986 0.0328875595922215 1 {I|L}S{I|L}DRA 6 6 38.598 0.0 0.0 3.873 0.0 0.0 131.09332851555126 207.11440454654533 338.2077330620966 0.0 0.0 0.0 0.0 0 1.5941876774005248 0.0 0.3807196863200844 0.0 {I|L}S{I|L}DRA 3.873 - 253 + 1 2.058 114685.1 1.0 5392 3586 8964 DOHH2_400M_050219_1,8980 DOHH2_400M_050219_1,8980,LPALSRDLL True True IPALRDISI 51.394625 499.305316150188 866975.0 8964.0 nc|ENSG00000185808|P57054-3|PIGP;;nc|ENSG00000185808|P57054|PIGP;;ENSG00000185808|ENST00000360525|PIGP 2.553744514783224 2.0 False 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8981 51.408 800.0 92557.0 25 0 10659.0 -1 ENYMRELRKM 10 97 693.3398925662041 0 693.3398925662041 PEAK CID FTMS 0 0 0 -1 0 17 Oxidation (M) _ENYMRELRKM(Oxidation (M))_ ENSG00000213512|ENST00000294671|GBP7 6.2057823575117 0.3961065659209838 1 {I|L}EDT{M(Oxidation (M))|F} 5 -1 25.701 0.0 0.0 1.8561 0.0 0.0 330.15807548881213 446.2181490533813 776.3762245421934 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}EDT{M(Oxidation (M))|F} 1.8561 - 152 + 1 2.058 61356.0 0.449999988079071 5393 3586 8964 DOHH2_400M_050219_1,8981 DOHH2_400M_050219_1,8981,ENYMRELRKM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8982 51.422 800.0 193160.0 25 0 9169.7 + 11217 GEPPGFLHSW 10 149 563.76768557751 1125.5208182218198 2 563.7693969607353 MULTI CID FTMS 0 0 0 8964 173611.46875 0.3562663582033388 2 -0.3207435607910156 18 Unmodified _GEPPGFLHSW_ ENSG00000130511|ENST00000270061|SSBP4;ENSG00000145687|ENST00000615665|SSBP2;ENSG00000157216|ENST00000610401|SSBP3;ENST00000506960.5_1_5:80911285-80946133:-|nuORF;ENST00000508912.1_1_5:80932374-80946133:-|nuORF;ENST00000589764.1_1_18:12067489-12068164:-|nuORF;ENST00000598159.6_1_19:18538161-18542842:+|nuORF;nc|ENSG00000130511|Q9BWG4-2|SSBP4;nc|ENSG00000145687|P81877-2|SSBP2;nc|ENSG00000145687|P81877-3|SSBP2;nc|ENSG00000145687|P81877-4|SSBP2;nc|ENSG00000145687|P81877-5|SSBP2;nc|ENSG00000145687|P81877|SSBP2;nc|ENSG00000157216|Q9BWW4-2|SSBP3;nc|ENSG00000157216|Q9BWW4-3|SSBP3 56.17704186161178 0.0466144807663799 1 {[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PP{I|L}HSW 10 4 + 60.979 0.0 0.0 5.4179 5.4179 84.146 0.0 0.0 0.0 43.18758762624413 13.521825181113629 13.521825181113629 8.82908757654959 0 0.3807196863200844 1.3979400086720375 1.079689690656103 0.0 {[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PP{I|L}HSW;{[DA]|[EG]}PP[{M(Oxidation (M))|F}T]VPPW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}SH{I|L}PPW;[C(Carbamidomethyl (C))M]VPP{I|L}HSW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PP{I|L}HWS;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PP{I|L}HC(Carbamidomethyl (C)){I|L};{[DA]|[EG]}{[QN]|[E{I|L}]|[KN]}{I|L}PPWW;{[CT]|[{M(Oxidation (M))|F}G]}WPP{I|L}HSW;{[DA]|[EG]}{[QN]|[E{I|L}]|[KN]}{I|L}PWPW;{[CT]|[{M(Oxidation (M))|F}G]}SH{I|L}PWPW 5.4179;4.6334;4.5259;4.2318;4.1372;4.0347;3.9654;3.8935;3.6979;3.6261 -;-;-;-;-;-;-;-;-;- 1552 + 1 2.058 121246.3 0.6299999952316284 5394 3586 8964 DOHH2_400M_050219_1,8982 DOHH2_400M_050219_1,8982,GEPPGFLHSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8983 51.437 800.0 287370.0 25 0 51628.0 -1 QVDCRHQKHRV 11 112 731.8791381716728 0 731.8791381716728 PEAK CID FTMS 0 0 0 -1 0 19 Carbamidomethyl (C) _QVDC(Carbamidomethyl (C))RHQKHRV_ ENST00000559664.5_1_15:34629408-34629573:-|nuORF 5.296884461304476 0.47618401536486 1 {M(Oxidation (M))|F}{I|L}KD 4 -1 23.203 0.0 0.0 1.5874 0.0 0.0 748.3285755603393 207.1141146295532 955.4426901898923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.2614393726401688 {M(Oxidation (M))|F}{I|L}KD 1.5874 - 646 + 1 2.058 163279.4 0.550000011920929 5395 3586 8964 DOHH2_400M_050219_1,8983 DOHH2_400M_050219_1,8983,QVDCRHQKHRV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8984 51.451 800.0 111150.0 25 0 6160.9 + 36917 TESWGSVLY 9 146 521.249509829351 1040.484466725502 2 521.2502929568291 MULTI CID FTMS 0 0 0 8964 92950.53125 0.1231221536650404 3 -0.5275344848632812 20 Unmodified _TESWGSVLY_ REV__ENSG00000168490|ENST00000454243|PHYHIP;REV__ENST00000522869.5_1_8:22081488-22084520:-|nuORF 13.50788311687929 0.4710407108020397 1 Y 1 -1 16.99 0.0 0.0 1.6329 0.0 0.0 859.409940823938 0.0 859.409940823938 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.6329 + + 87 + 1 2.058 70658.5 0.4799999892711639 5396 3586 8964 DOHH2_400M_050219_1,8984 DOHH2_400M_050219_1,8984,TESWGSVLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8986 51.455 4.7 8847800.0 25 0 999710.0 + 25452 NEIEDTFRQF 10 53 649.8038104848894 1297.5930680365786 2 649.8052856326103 MULTI CID FTMS 0 0 0 8985 9605573.0 0.3732776430871861 1 -0.1463775634765625 1 Unmodified _NEIEDTFRQF_ ENSG00000128524|ENST00000249289|ATP6V1F 55.23464941255904 0.0494277333541689 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F} 7 3 48.984 0.0 0.0 3.775 0.0 0.0 0.0 446.2170199029906 446.2170199029906 39.69228530870048 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F} 3.775 + + 57 + 1 2.045 37902.6 1.0 5397 3587 8985 DOHH2_400M_050219_1,8986 DOHH2_400M_050219_1,8986,NEIEDTFRQF True True NEIEDTFRQF 51.455395 649.80528563261 490220395.125 8985.0 ENSG00000128524|ENST00000249289|ATP6V1F 7.279888153076172 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8987 51.457 16.0 3450500.0 25 0 634620.0 + 15016 ILSPFLDHIY 10 49 609.3296934022329 1216.6448338712655 2 609.3301269412041 MULTI CID FTMS 0 0 0 8985 3531878.25 0.7134531768597666 1 -0.1463775634765625 2 Unmodified _ILSPFLDHIY_ REV__ENSG00000115464|ENST00000398571|USP34;REV__nc|ENSG00000115464|Q70CQ2-2|USP34;REV__nc|ENSG00000115464|Q70CQ2-3|USP34 15.847184025352805 0.5816416552707754 1 {I|L}{I|L}{I|L}Y 4 -1 41.938 0.0 0.0 3.447 0.0 0.0 696.320517986566 0.0 696.320517986566 0.0 30.96910013008056 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}{I|L}{I|L}Y 3.447 - 15 1 2.045 50100.2 1.0 5398 3587 8985 DOHH2_400M_050219_1,8987 DOHH2_400M_050219_1,8987,ILSPFLDHIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8988 51.458 0.84 67054000.0 25 0 8361900.0 + 842 AETPDIKLF 9 80 517.2814513798171 1032.548349826434 2 517.2823364138603 MULTI CID FTMS 0 0 0 8985 72973880.0 1.0 0 0.0 3 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 37.07464296494664 0.0915153923251136 1 {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F} 9 0 + 47.841 0.0 0.0 4.6333 4.6333 87.716 0.0 0.0 0.0 -1.844019683410636 8.399028321079953 -1.844019683410636 35.46002544127475 0 0.9247425010840048 0.0 0.0 0.0 + + {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}T[YV]{I|L}[{I|L}A][PG];{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}AAK{I|L}{M(Oxidation (M))|F};[K{I|L}]D{I|L}[YV][WP] 4.6333;1.1991;1.0026;0.80869 +;-;-;- + 253 + 1 2.045 51261.7 1.0 5399 3587 8985 DOHH2_400M_050219_1,8988 DOHH2_400M_050219_1,8988,AETPDIKLF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8989 51.459 8.6 7093500.0 25 0 614660.0 + + 39629 VSDIVGPDGLVY 12 91 617.3213627496233 1232.6281725660465 2 617.3217040896416 MULTI CID FTMS 0 0 0 8985 7325642.0 1.0 0 0.0 4 Unmodified _VDSLYVIYVY_ ENSG00000105202|ENST00000221801|FBL 26.88365393820708 0.3646707531412818 1 [VS]D{I|L}VYY{I|L}VY 10 -1 + 49.396 0.0 0.0 4.0074 4.0074 72.702 0.0 0.0 0.0 4.380541422828443 23.037275116073346 4.380541422828443 1.989700043360188 0 1.3182503180159344 0.721246399047171 1.079689690656103 0.0 [VS]D{I|L}VYY{I|L}VY;[VS]D{I|L}YYV{I|L}VY;[VS]D{I|L}YY{I|L}VVY;[VS]DV{I|L}YY{I|L}VY;[DP]AKVVDD{I|L}VY;[DP]ARV[WD]{I|L}VY;[VS][QP]VVDD{I|L}VY;[VS]EVVYY{I|L}VY;[DP]AKVDDV{I|L}VY;[VS][QP]VDDV{I|L}VY 4.0074;3.846;3.52;3.3661;3.2766;3.247;3.2325;3.1568;3.1556;3.1115 -;-;-;-;-;-;-;-;-;- 2817 1 2.045 49863.3 1.0 5400 3587 8985 DOHH2_400M_050219_1,8989 DOHH2_400M_050219_1,8989,VDSLYVIYVY False False VSDIVGPDGLVY 51.458931 617.321704089642 159327768.0 8985.0 ENSG00000105202|ENST00000221801|FBL 6.143478870391846 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8990 51.461 92.0 689660.0 25 0 157150.0 + 33542 SLLEKSLGL 9 78 480.29206344829913 958.5695739633984 2 480.2922241091728 MULTI CID FTMS 0 0 0 8985 928063.375 1.0 0 0.0 5 Unmodified _SILGSGTLVL_ ENSG00000124802|ENST00000379715|EEF1E1;nc|ENSG00000124802|O43324-2|EEF1E1 41.8396318013385 0.1381409678234242 1 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 7 4 62.255 0.0 0.0 6.4946 0.0 0.0 0.0 328.1836436766342 328.1836436766342 49.4909694086142 0.0 0.0 0.0 0 1.0 2.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 6.4946 - 651 1 2.045 53212.1 1.0 5401 3587 8985 DOHH2_400M_050219_1,8990 DOHH2_400M_050219_1,8990,SILGSGTLVL False False SLLEKSLGL 51.460945 480.292224109173 5054006.0 8985.0 ENSG00000124802|ENST00000379715|EEF1E1;;nc|ENSG00000124802|O43324-2|EEF1E1 0.5950231303771337 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8991 51.465 183.0 340960.0 25 0 36982.0 -1 QLCCWMLLFS 10 73 630.2845772509439 1258.5546015686878 2 630.2855712771416 MULTI CID FTMS 0 0 0 8985 318571.5625 1.0 0 0.0 6 Oxidation (M) _QLCCWM(Oxidation (M))LLFS_ nc|ENSG00000134882|Q8NBM4-2|UBAC2 13.90604991867851 0.6142120002215601 1 Q{I|L}A[Y{I|L}] 5 -1 22.971 0.0 0.0 1.8252 0.0 0.0 652.22172743965 0.0 652.22172743965 0.0 2.001962355242952 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 Q{I|L}A[Y{I|L}] 1.8252 - 72 1 2.045 54074.3 1.0 5402 3587 8985 DOHH2_400M_050219_1,8991 DOHH2_400M_050219_1,8991,QLCCWMLLFS False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 8992 51.478 800.0 197680.0 25 0 9762.7 -1 0 145 881.4126494107194 1760.810745888239 2 881.9058105349541 MULTI CID FTMS 0 0 0 8985 257563.109375 0.0097357605778351 10 -1.12548828125 7 1 [KT]QY{M(Oxidation (M))|F}ANEQA[CS]C(Carbamidomethyl (C))V{I|L} 15 -1 + 103.54 0.0 0.0 5.8803 5.8803 59.912 0.0 0.0 0.0 69.49019643664374 8.178119226579895 8.178119226579895 0.0 0 0.0 0.0 1.110924374808178 1.860924374808178 [KT]QY{M(Oxidation (M))|F}ANEQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}ANEQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ANEAGA[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}ANEAGA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}ADQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ADQAGA[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}ADQAGA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ANEQA[CS]V[CG]{I|L};[KT][AG]Y{M(Oxidation (M))|F}ANEQA[CS]VC(Carbamidomethyl (C)){I|L} 5.8803;5.8803;5.5459;5.5459;5.5359;5.5359;5.375;5.375;5.3674;5.3674 -;-;-;-;-;-;-;-;-;- 62973 + 1 2.045 110822.0 0.9300000071525574 5403 3587 8985 DOHH2_400M_050219_1,8992 DOHH2_400M_050219_1,8992, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 8993 51.484 330.0 149590.0 25 0 8451.2 + 5940 DQERVWRPPEG 11 93 684.8392141207685 1367.6638753083369 2 684.8401367068291 MULTI CID FTMS 0 0 0 8985 210067.03125 1.0 0 0.0 8 Unmodified _DQERVWRPPEG_ ENST00000397124.5_2_16:2258787-2258862:+|nuORF 17.44264345198275 0.6723198055858692 1 [Y{I|L}][HD]{I|L}VV{I|L}S{M(Oxidation (M))|F}Y 11 11 + 32.489 0.0 0.0 2.3755 2.3755 72.813 0.0 0.0 0.0 10.417663570913874 4.731301212503752 4.731301212503752 5.5681094537576605 0 0.3807196863200844 0.0 0.3054621874040891 0.0 [Y{I|L}][HD]{I|L}VV{I|L}S{M(Oxidation (M))|F}Y;[Y{I|L}][HD]V{I|L}V{I|L}S{M(Oxidation (M))|F}Y;[Y{I|L}][HD]{I|L}V[W{I|L}]{M(Oxidation (M))|F}Y;[Y{I|L}][HD]V{I|L}[W{I|L}]{M(Oxidation (M))|F}Y;[Y{I|L}][HD]{I|L}V[Y{I|L}]S[{M(Oxidation (M))|F}V];[Y{I|L}][HD]{I|L}VV[YT][{M(Oxidation (M))|F}V];[Y{I|L}][HD]V{I|L}[Y{I|L}]S[{M(Oxidation (M))|F}V];[Y{I|L}][HD]V{I|L}V[YT][{M(Oxidation (M))|F}V] 2.3755;1.9684;1.3128;0.90564;0.77143;0.55133;0.36431;0.1442 -;-;-;-;-;-;-;- 1150 + 1 2.045 42567.3 1.0 5404 3587 8985 DOHH2_400M_050219_1,8993 DOHH2_400M_050219_1,8993,DQERVWRPPEG False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 8994 51.488 203.0 271010.0 25 0 16664.0 + 32991 SENDVIRLI 9 103 529.7954158322941 0 529.7950927615166 PEAK CID FTMS 0 0 0 8985 188925.234375 0.7309912847872905 1 -0.1463775634765625 9 Unmodified _SENDVIRLI_ ENSG00000081320|ENST00000263955|STK17B 40.23920728925047 0.0605413866147893 1 NDV{I|L}R 5 4 35.494 0.0 0.0 3.3562 0.0 0.0 216.0727652414124 241.1563509576781 457.2291161990905 0.0 0.0 0.0 0.0 0 1.4436726795685342 0.0 0.0 0.0 + NDV{I|L}R 3.3562 + + 67 + 1 2.045 47798.1 1.0 5405 3587 8985 DOHH2_400M_050219_1,8994 DOHH2_400M_050219_1,8994,SENDVIRLI True True SENDVIRLI 51.488232 529.795092761517 2206235.25 8985.0 ENSG00000081320|ENST00000263955|STK17B 6.056463400522868 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8995 51.502 800.0 280470.0 25 0 24775.0 -1 YFCRYCAWRVF 11 115 814.3713116151273 1626.7280702970545 2 814.3715698122978 MULTI CID FTMS 0 0 0 8985 165549.65625 0.7341225370238902 -1 0.1743659973144531 10 2 Carbamidomethyl (C) _YFC(Carbamidomethyl (C))RYC(Carbamidomethyl (C))AWRVF_ ENSG00000163121|ENST00000451794|NEURL3 0.3506318815782774 0.8734936314171269 1 [DP]{I|L}K{I|L}T{M(Oxidation (M))|F}EA 9 -1 58.586 0.0 0.0 3.6015 0.0 0.0 0.0 609.1647707113499 609.1647707113499 12.083880620110676 0.0 0.0 0.0 0 0.0 0.7958800173440752 1.079689690656103 0.4247425010840047 [DP]{I|L}K{I|L}T{M(Oxidation (M))|F}EA 3.6015 - 2485 1 2.045 156183.9 0.7599999904632568 5406 3587 8985 DOHH2_400M_050219_1,8995 DOHH2_400M_050219_1,8995,YFCRYCAWRVF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8996 51.516 800.0 178280.0 25 0 11666.0 + -1 QSMQTVFNM 9 186 543.7373796224075 1085.460206311615 2 543.7383300662041 MULTI CID FTMS 0 0 0 8985 156673.09375 1.0 0 0.0 11 Oxidation (M) _QPGM(Oxidation (M))QPQPGM_ nc|ENSG00000135387|Q14444-2|CAPRIN1;ENSG00000135387|ENST00000341394|CAPRIN1 14.838274106304384 0.5985701837916485 1 VMN{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5 -1 18.751 0.0 0.0 1.7275 0.0 0.0 429.1610252586837 0.0 429.1610252586837 0.0 2.980513416696489 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.7742275032520141 VMN{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.7275 - 876 + 1 2.045 107432.9 0.699999988079071 5407 3587 8985 DOHH2_400M_050219_1,8996 DOHH2_400M_050219_1,8996,QPGMQPQPGM False False QSMQTVFNM 51.515914 543.738330066204 265587.90625 8985.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 3.688475489616394 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 8997 51.524 441.0 224260.0 25 0 29599.0 + 32864 SEIADPTRFF 10 105 591.7929285186302 1181.5713041040603 2 591.7935668826103 MULTI CID FTMS 0 0 0 8985 152418.71875 1.0 0 0.0 12 Unmodified _SEIADPTRFF_ ENSG00000213676|ENST00000375203|ATF6B;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B 32.037481411007896 0.2488723560272515 1 {[ES]|[DT]|[{I|L}C]}{I|L}AD[{I|L}T]DRY 10 4 + 44.218 0.0 0.0 3.7423 3.7423 81.222 0.0 0.0 0.0 31.118960344387787 3.723859041996498 3.723859041996498 9.285055826186657 0 1.424742501084005 0.0 0.0 0.3807196863200844 {[ES]|[DT]|[{I|L}C]}{I|L}AD[{I|L}T]DRY;{[ES]|[DT]|[{I|L}C]}{I|L}AD[{I|L}T]{[WT]|[RM]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}W[{I|L}T]DRY;{[ES]|[DT]|[{I|L}C]}{I|L}W[{I|L}T]{[WT]|[RM]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}[YV][W{I|L}]SW;{[ES]|[DT]|[{I|L}C]}{I|L}{[{M(Oxidation (M))|F}D]|MM}[RP]RY;{[ES]|[DT]|[{I|L}C]}{I|L}{[ET]|[MV]}{[VA]|[{I|L}G]}DRY;{[ES]|[DT]|[{I|L}C]}{I|L}{[ET]|[MV]}{[RE]|[WV]}RY;{[ES]|[DT]|[{I|L}C]}{I|L}[RH][Y{M(Oxidation (M))|F}][KC];{[ES]|[DT]|[{I|L}C]}{I|L}{[ET]|[MV]}[RH]D[VP] 3.7423;2.9565;2.83;2.0442;1.4871;1.1756;1.1369;0.83884;0.74224;0.61714 -;-;-;-;-;-;-;-;-;- 252 + 1 2.045 76465.9 1.0 5408 3587 8985 DOHH2_400M_050219_1,8997 DOHH2_400M_050219_1,8997,SEIADPTRFF False True SEIADPTRFF 51.523764 591.79356688261 871989.3125 8985.0 ENSG00000213676|ENST00000375203|ATF6B;;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;;nc|ENSG00000213676|Q99941-2|ATF6B 5.613156636555989 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 8998 51.528 244.0 340200.0 25 0 27448.0 + 9449 FLCFNELW 8 108 536.2546619940751 0 536.2535888552666 PEAK CID FTMS 0 0 0 8985 147671.96875 0.9953888385922888 -1 0.1743659973144531 13 Unmodified _FLCFNELW_ REV__ENST00000486172.1_1_3:62385083-62388968:-|nuORF 12.531546534597751 0.5131024102181418 1 PG{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E 5 -1 11.198 0.0 0.0 1.046 0.0 0.0 147.0656310840613 403.2342012994751 550.2998323835363 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 PG{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E 1.046 - 14 + 1 2.045 64840.7 1.0 5409 3587 8985 DOHH2_400M_050219_1,8998 DOHH2_400M_050219_1,8998,FLCFNELW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 8999 51.538 449.0 228300.0 25 0 18167.0 45861 YYQQIHHGEP 10 94 636.2945810491921 1270.574609165184 2 636.2959472537041 MULTI CID FTMS 0 0 0 8985 142384.625 0.7663627185367431 -1 0.1743659973144531 14 Unmodified _YYQQIHHGEP_ ENSG00000008197|ENST00000008391|TFAP2D 12.240655878213236 0.6421556946785427 1 VSD{I|L}V 5 9 45.244 0.0 0.0 3.5609 0.0 0.0 0.0 754.2811469940541 754.2811469940541 18.772795641327548 0.0 0.0 0.0 0 1.0629529932484498 1.0457574905606752 0.0 0.0 VSD{I|L}V 3.5609 - 134 + 1 2.045 80455.6 1.0 5410 3587 8985 DOHH2_400M_050219_1,8999 DOHH2_400M_050219_1,8999,YYQQIHHGEP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9000 51.541 141.0 399750.0 25 0 36579.0 31882 RTLMNFLAPD 10 86 589.3027508256428 1176.5909487180854 2 589.3027831912041 MULTI CID FTMS 0 0 0 8985 142828.40625 0.2974298867608136 -1 0.1743659973144531 15 Unmodified _RTLMNFLAPD_ ENST00000470306.5_1_1:156126086-156128580:+|nuORF 18.1463463914782 0.5430639438673815 1 {[MS]|[{M(Oxidation (M))|F}A]}H{M(Oxidation (M))|F}{I|L}PDA{I|L}{M(Oxidation (M))|F} 10 8 + 34.504 0.0 0.0 2.9325 2.9325 71.174 0.0 0.0 0.0 0.5141591348905976 12.641368885835211 0.5141591348905976 3.0102999566398125 0 0.3935078169319297 0.0 0.4247425010840047 0.0 {[MS]|[{M(Oxidation (M))|F}A]}H{M(Oxidation (M))|F}{I|L}PDA{I|L}{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}H{M(Oxidation (M))|F}P{I|L}DA{I|L}{M(Oxidation (M))|F};[DP]{I|L}[HV]{I|L}{M(Oxidation (M))|F}H{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}T{[ET]|[MV]}{I|L}[HV]{I|L}{M(Oxidation (M))|F};[DP]ARR[YV]T{[CP]|[EA]};[WD][{M(Oxidation (M))|F}T]{I|L}[HV]{I|L}{M(Oxidation (M))|F};{[ET]|[MV]}[RK]{I|L}DPT{[MS]|[{M(Oxidation (M))|F}A]};[TA][KS][HA]{M(Oxidation (M))|F}PT{[MS]|[{M(Oxidation (M))|F}A]};[TA][KS][HA]P{M(Oxidation (M))|F}T{[MS]|[{M(Oxidation (M))|F}A]};{[MS]|[{M(Oxidation (M))|F}A]}T[YV][{M(Oxidation (M))|F}V]A{I|L}{M(Oxidation (M))|F} 2.9325;2.6767;1.7368;1.2592;1.1816;1.1361;1.1033;0.81435;0.7276;0.66622 -;-;-;-;-;-;-;-;-;- 286 + 1 2.045 49476.4 1.0 5411 3587 8985 DOHH2_400M_050219_1,9000 DOHH2_400M_050219_1,9000,RTLMNFLAPD False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9001 51.554 800.0 328270.0 25 0 31813.0 23902 LVMKTFSSL 9 165 513.2876577818579 1024.5607626305157 2 513.2863036990166 MULTI CID FTMS 0 0 0 8985 132817.9375 0.3921428131192143 1 -0.1463775634765625 16 Unmodified _LVMKTFSSL_ ENSG00000119004|ENST00000356079|CYP20A1;nc|ENSG00000119004|Q6UW02-2|CYP20A1 18.13498045792455 0.3457906370836843 1 VVQQQVV[EP] 9 8 + 47.598 0.0 0.0 4.6457 4.6457 83.096 0.0 0.0 0.0 9.940382115513351 16.380483287754508 9.940382115513351 9.208187539523747 0 0.9247425010840048 1.6989700043360187 0.0 0.4247425010840047 VVQQQVV[EP];VVQQ[AG]VV[EP];VV{[HG]|PP}{M(Oxidation (M))|F}VVT[PA];VV{[HG]|PP}{M(Oxidation (M))|F}VT[PG]{I|L};VV{[HG]|PP}{M(Oxidation (M))|F}VTV[PA];VVRMP[TP][EP];VV{[HG]|PP}{M(Oxidation (M))|F}[K{I|L}][EP];VV{[HG]|PP}{M(Oxidation (M))|F}VT{I|L}[PG];VVE[PA][VS]V[EP];VV[WQ][QP]T[PA] 4.6457;3.7469;3.3072;2.9394;2.874;2.7241;2.6978;2.429;2.1845;2.1132 -;-;-;-;-;-;-;-;-;- 2394 1 2.045 199772.5 0.6000000238418579 5412 3587 8985 DOHH2_400M_050219_1,9001 DOHH2_400M_050219_1,9001,LVMKTFSSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9002 51.568 800.0 181540.0 25 0 15050.0 + 36948 TEWVGATTDW 10 167 583.261491968552 1164.508431003904 2 583.2609741091728 MULTI CID FTMS 0 0 0 8985 105981.59375 0.6503706960951708 -1 0.1743659973144531 17 Unmodified _TEWVGATTDW_ ENSG00000168028|ENST00000301821|RPSA;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 65.23502041540118 0.0228537820337083 1 TQVPDW 6 6 50.411 0.0 0.0 4.329 0.0 0.0 420.160727001754 0.0 420.160727001754 0.0 24.03089986991944 0.0 0.0 0 0.6747425010840047 0.0 0.9674165578762486 0.0 TQVPDW 4.329 - 1833 + 1 2.045 110762.0 0.6200000047683716 5413 3587 8985 DOHH2_400M_050219_1,9002 DOHH2_400M_050219_1,9002,TEWVGATTDW True True TEWVGATTDW 51.56827 583.260974109173 785585.9375 8985.0 nc|ENSG00000288920|A0A8I5KQE6|RPSA2;;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;;ENSG00000168028|ENST00000301821|RPSA 5.906357606252034 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9003 51.575 332.0 198140.0 25 0 46748.0 + 27292 PHKGLVLL 8 91 438.7868376717502 875.5591224103005 2 438.7869750857353 MULTI CID FTMS 0 0 0 8985 97228.9609375 0.605303769881878 -1 0.1743659973144531 18 Unmodified _PHKGLVLL_ ENSG00000262246|ENST00000251166|CORO7;ENST00000572274.1_1_16:4391391-4409335:-|nuORF;ENST00000575531.5_1_16:4407102-4412712:-|nuORF;ENST00000575714.5_1_16:4408319-4455566:-|nuORF;nc|ENSG00000262246|P57737-2|CORO7;nc|ENSG00000262246|P57737-3|CORO7;nc|ENSG00000262246|P57737-4|CORO7 14.581692164780916 0.6954967302934248 1 {I|L}{I|L} 2 6 24.821 0.0 0.0 2.8348 0.0 0.0 631.3793566405724 0.0 631.3793566405724 0.0 17.37334396171555 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {I|L}{I|L} 2.8348 + + 47 + 1 2.045 58044.8 1.0 5414 3587 8985 DOHH2_400M_050219_1,9003 DOHH2_400M_050219_1,9003,PHKGLVLL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9004 51.589 800.0 78306.0 25 0 5290.4 + 38594 TTDLSFLDKY 10 115 601.8004638552666 0 601.8004638552666 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _TTDLSFLDKY_ ENSG00000033178|ENST00000322244|UBA6;nc|ENSG00000033178|A0AVT1-3|UBA6;ENST00000429659.7_1_4:68529542-68566852:-|nuORF;nc|ENSG00000033178|A0AVT1-4|UBA6 21.53697664764585 0.2858915239208219 1 Y{M(Oxidation (M))|F} 2 9 5.5732 0.0 0.0 0.46382 0.0 0.0 679.3792459943376 209.05756555728752 888.436811551625 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.46382 - 26 + 1 2.045 45605.2 0.5400000214576721 5415 3587 8985 DOHH2_400M_050219_1,9004 DOHH2_400M_050219_1,9004,TTDLSFLDKY False False TTDLSFLDKY 51.589292 601.800463855267 356474.75 8985.0 ENSG00000033178|ENST00000322244|UBA6;;nc|ENSG00000033178|A0AVT1-3|UBA6;;ENST00000429659.7_1_4:68529542-68566852:-|nuORF;;nc|ENSG00000033178|A0AVT1-4|UBA6 -0.4273033738136291 2.0 True 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9005 51.597 456.0 136540.0 25 0 8152.8 27077 PEVLKRPEYF 10 88 639.3476083310292 1276.6806637288582 2 639.3473998904228 MULTI CID FTMS 0 0 0 8985 86616.1875 0.4678196533782184 -1 0.1743659973144531 20 Unmodified _PEVLKRPEYF_ ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;nc|ENSG00000080802|O95628|CNOT4 8.745405648335112 0.6861838735306406 1 TPD{I|L}K{I|L}{M(Oxidation (M))|F} 7 7 30.71 0.0 0.0 2.4055 0.0 0.0 444.2096355477573 0.0 444.2096355477573 0.0 4.904399866912886 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 TPD{I|L}K{I|L}{M(Oxidation (M))|F} 2.4055 - 282 + 1 2.045 52729.6 1.0 5416 3587 8985 DOHH2_400M_050219_1,9005 DOHH2_400M_050219_1,9005,PEVLKRPEYF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9007 51.613 687.0 123110.0 25 0 8000.3 + 10289 FRPPNPWTM 9 132 573.281438227439 1144.548323521678 2 573.2820922732353 MULTI CID FTMS 0 0 0 9006 60613.171875 0.1559952970303798 1 -0.2067909240722656 1 Unmodified _FRPPNPWTM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 43.77239144664712 0.0547478964384323 1 [WP]T{[QV]|[N{I|L}]|[RA]|[KV]}PWTM 9 4 + 51.705 0.0 0.0 4.5175 4.5175 80.086 0.0 0.0 0.0 6.387437564371012 20.691446804494905 6.387437564371012 7.257724967479859 0 1.1861818737241734 1.3010299956639813 0.0 0.0 [WP]T{[QV]|[N{I|L}]|[RA]|[KV]}PWTM;[WP]T{[QV]|[N{I|L}]|[RA]|[KV]}PWCE;[WP]T{[QV]|[N{I|L}]|[RA]|[KV]}P{[SA]|[TG]}EM;{M(Oxidation (M))|F}M{[SA]|[TG]}P{[QV]|[N{I|L}]|[RA]|[KV]}T[HQ];[WP]T{[QV]|[N{I|L}]|[RA]|[KV]}P{[DA]|[EG]}TM;[WP]T{[QV]|[N{I|L}]|[RA]|[KV]}T[PG]EM;{M(Oxidation (M))|F}M[PG]T{[QV]|[N{I|L}]|[RA]|[KV]}T[HQ];{[WT]|[RM]}P{[QV]|[N{I|L}]|[RA]|[KV]}PWTM;[VG]MP{[QV]|[N{I|L}]|[RA]|[KV]}PWTM;{M(Oxidation (M))|F}M[PG]E[KA]T[HQ] 4.5175;3.8834;3.8445;3.8211;3.713;3.4276;3.4042;3.0731;2.8742;2.5651 -;-;-;-;-;-;-;-;-;- 295 1 2.024 69630.4 1.0 5417 3588 9006 DOHH2_400M_050219_1,9007 DOHH2_400M_050219_1,9007,FRPPNPWTM True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9008 51.616 149.0 407560.0 25 0 84591.0 9029 FDRFLKIIR 9 77 604.3668530095534 1206.7191530859068 2 604.3669921755791 MULTI CID FTMS 0 0 0 9006 466458.09375 1.0 0 0.0 2 Unmodified _FDRFLKIIR_ ENSG00000181631|ENST00000325602|P2RY13;nc|ENSG00000181631|Q9BPV8-2|P2RY13 1.0714618166137932 0.8772799748779447 1 Y 1 9 11.99 0.0 0.0 0.99358 0.0 0.0 1025.6450849480143 0.0 1025.6450849480143 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.99358 - 20 + 1 2.024 49945.0 1.0 5418 3588 9006 DOHH2_400M_050219_1,9008 DOHH2_400M_050219_1,9008,FDRFLKIIR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9009 51.618 92.0 432440.0 25 0 60311.0 13501 HMIKKRRRWWF 11 32 822.465000014316 1642.915447095432 2 822.9670287966728 MULTI CID FTMS 0 0 0 9006 398761.875 1.0 0 0.0 3 Unmodified _HMIKKRRRWWF_ ENST00000229634.13_1_6:126136448-126199430:+|nuORF 0.0 0.8751479354844584 1 {M(Oxidation (M))|F}{I|L}K 3 8 10.177 0.0 0.0 0.61947 0.0 0.0 628.3815858667195 623.2710665338499 1251.6526524005694 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F}{I|L}K 0.61947 + + 7 + 1 2.024 32757.9 1.0 5419 3588 9006 DOHH2_400M_050219_1,9009 DOHH2_400M_050219_1,9009,HMIKKRRRWWF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9010 51.631 771.0 169940.0 25 0 6902.9 -1 0 133 1029.8307320796832 3086.47036683925 3 1030.496874988079 MULTI CID FTMS 0 0 0 9006 322104.5625 0.1565394352230974 4 -0.4789810180664062 4 1 [MN]PN{I|L} 5 -1 33.543 0.0 0.0 1.0868 0.0 0.0 0.0 2514.1837206813 2514.1837206813 7.077118610328341 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.5994850021680094 [MN]PN{I|L} 1.0868 - 3999 1 2.024 87455.4 1.0 5420 3588 9006 DOHH2_400M_050219_1,9010 DOHH2_400M_050219_1,9010, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9011 51.637 300.0 218740.0 25 0 49644.0 31370 RNRRVTRRK 9 62 621.3931552858351 1240.77175763847 2 621.3939086794853 MULTI CID FTMS 0 0 0 9006 209100.90625 1.0 0 0.0 5 Unmodified _RNRRVTRRK_ ENSG00000162490|ENST00000294485|DRAXIN 0.6014990680409731 0.8936861360942873 1 {M(Oxidation (M))|F} 1 9 9.7539 0.0 0.0 0.78612 0.0 0.0 1075.6922726304606 0.0 1075.6922726304606 0.0 5.774509799928715 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.78612 - 9 + 1 2.024 52748.6 1.0 5421 3588 9006 DOHH2_400M_050219_1,9011 DOHH2_400M_050219_1,9011,RNRRVTRRK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9012 51.645 496.0 287660.0 25 0 57794.0 + 41123 VNVLQQVVL 9 127 506.31352462748976 0 506.3139221072197 PEAK CID FTMS 0 0 0 9006 191495.34375 0.7175893890680889 -1 0.1463775634765625 6 Unmodified _VNVLQQVVL_ REV__ENSG00000158158|ENST00000377075|CNNM4 15.847184025352805 0.2451986057151378 1 VVV 3 -1 25.445 0.0 0.0 2.5178 0.0 0.0 131.09202165492428 579.2915590003919 710.3835806553161 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 VVV 2.5178 - 213 + 1 2.024 112397.7 1.0 5422 3588 9006 DOHH2_400M_050219_1,9012 DOHH2_400M_050219_1,9012,VNVLQQVVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9013 51.652 386.0 262760.0 25 0 42771.0 31706 RRPKPGLSPLS 11 101 403.24667657316655 1206.7182003196997 3 403.2466613650322 MULTI CID FTMS 0 0 0 9006 187830.09375 1.0 0 0.0 7 Unmodified _RRPKPGLSPLS_ ENST00000488391.5_1_9:130913785-130915395:+|nuORF 1.3296431237094175 0.8688745925763601 1 {I|L} 1 10 7.9251 0.0 0.0 0.65675 0.0 0.0 1075.6228461710652 0.0 1075.6228461710652 0.0 6.331339447023845 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.65675 + + 10 + 1 2.024 82094.5 1.0 5423 3588 9006 DOHH2_400M_050219_1,9013 DOHH2_400M_050219_1,9013,RRPKPGLSPLS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9014 51.666 800.0 95479.0 25 0 24862.0 -1 CLWFPLLRRLR 11 92 765.4479353812749 1528.8813178293497 2 765.4476806521416 MULTI CID FTMS 0 0 0 9006 143017.53125 1.0 0 0.0 8 Carbamidomethyl (C) _C(Carbamidomethyl (C))LWFPLLRRLR_ AluJb_dup59924|chr9:37399956-37400259:-|1.168618289648749|0.0039503058064583|8.21|48.0|5|2|sense 0.3070304955306653 0.8736993455979228 1 W 1 -1 11.42 0.0 0.0 0.74695 0.0 0.0 1324.7911058926293 0.0 1324.7911058926293 0.0 1.4199832818260028 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.74695 + + 30 + 1 2.024 65871.2 0.6899999976158142 5424 3588 9006 DOHH2_400M_050219_1,9014 DOHH2_400M_050219_1,9014,CLWFPLLRRLR False False False False ERV PXD020620_cell_line DOHH2_400M_050219_1 9015 51.677 530.0 207650.0 25 0 13400.0 + 7311 EEVQFLKTL 9 138 553.8095357234573 0 553.8098632693291 PEAK CID FTMS 0 0 0 9006 123113.171875 1.0 0 0.0 9 Unmodified _EEVQFLKTL_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 99.7552728972412 0.0289346139657567 1 VQ{M(Oxidation (M))|F}{I|L}K 5 4 31.969 0.0 0.0 2.8915 0.0 0.0 258.0887847264083 229.12020288638908 487.2089876127974 0.0 0.0 0.0 0.0 0 1.055462187404089 0.0 0.0 0.4247425010840047 + VQ{M(Oxidation (M))|F}{I|L}K 2.8915 + + 270 + 1 2.024 88821.7 1.0 5425 3588 9006 DOHH2_400M_050219_1,9015 DOHH2_400M_050219_1,9015,EEVQFLKTL True True EEVQFLKTL 51.676767 553.809863269329 465951.46875 9006.0 nc|ENSG00000090861|P49588-2|AARS1;;ENSG00000090861|ENST00000261772|AARS1 6.079891204833984 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9016 51.691 800.0 159430.0 25 0 49796.0 + 27429 PIQHVLHKLVW 11 128 685.4115141497126 1368.8084753662251 2 685.4109985232353 MULTI CID FTMS 0 0 0 9006 112934.6484375 0.6256241901433138 -1 0.1463775634765625 10 Unmodified _PIQHVLHKLVW_ REV__ENSG00000112159|ENST00000369393|MDN1 1.3296431237094175 0.8688745925763601 1 Y 1 -1 10.837 0.0 0.0 0.79174 0.0 0.0 1187.733949464661 0.0 1187.733949464661 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.79174 - 92 + 1 2.024 110915.2 0.5400000214576721 5426 3588 9006 DOHH2_400M_050219_1,9016 DOHH2_400M_050219_1,9016,PIQHVLHKLVW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9017 51.701 595.0 104730.0 25 0 24448.0 + -1 RRRRRRCIMAV 11 91 510.6347488610221 1528.8824171832662 3 510.6352722048759 MULTI CID FTMS 0 0 0 9006 110931.578125 0.713845419079794 1 -0.2067909240722656 11 Carbamidomethyl (C) _RRRRRRC(Carbamidomethyl (C))IMAV_ REV__nc|ENSG00000254402|Q50LG9|LRRC24 0.0948413911109767 0.8747004676205551 1 {I|L} 1 -1 9.6777 0.0 0.0 0.63299 0.0 0.0 1397.7871698461552 0.0 1397.7871698461552 0.0 9.67771005386541 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.63299 + + 5 + 1 2.024 65088.2 1.0 5427 3588 9006 DOHH2_400M_050219_1,9017 DOHH2_400M_050219_1,9017,RRRRRRCIMAV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9018 51.716 800.0 112960.0 25 0 27719.0 42752 VVFLLIRLLTH 11 105 662.4321496047204 0 662.4319335818291 PEAK CID FTMS 0 0 0 9006 79802.3828125 1.0 0 0.0 12 Unmodified _VVFLLIRLLTH_ ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213 1.4819007175156935 0.4761840153648598 1 YV{I|L}G 4 9 10.973 0.0 0.0 0.82947 0.0 0.0 678.5271277233095 209.05610071353752 887.583228436847 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YV{I|L}G 0.82947 - 90 + 1 2.024 78106.2 0.4699999988079071 5428 3588 9006 DOHH2_400M_050219_1,9018 DOHH2_400M_050219_1,9018,VVFLLIRLLTH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9019 51.722 321.0 219910.0 25 0 18580.0 + -1 VPDPECELY 9 102 561.2461278457513 1120.4777027583025 2 561.2463256716728 MULTI CID FTMS 0 0 0 9006 307481.09375 1.0 0 0.0 13 Carbamidomethyl (C) _VPDPEC(Carbamidomethyl (C))ELY_ REV__ENSG00000152292|ENST00000469800|SH2D6 11.640296217721598 0.521594087909532 1 {[YD]|[{M(Oxidation (M))|F}M]}SA{M(Oxidation (M))|F}DQ{I|L}Y 9 -1 + 36.889 0.0 0.0 3.2922 3.2922 74.271 0.0 0.0 0.0 4.9466228648222135 11.082720884511808 4.9466228648222135 4.9466228648222135 0 0.7429928190999391 1.154901959985743 0.3807196863200844 0.0 {[YD]|[{M(Oxidation (M))|F}M]}SA{M(Oxidation (M))|F}DQ{I|L}Y;{[SA]|[TG]}DY{M(Oxidation (M))|F}DQ{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}GTDQ{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}SA{M(Oxidation (M))|F}D[AG]{I|L}Y;{[{M(Oxidation (M))|F}C]|[YS]}DA{M(Oxidation (M))|F}DQ{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}S[W{M(Oxidation (M))|F}]Q{I|L}Y;{[SA]|[TG]}DY{M(Oxidation (M))|F}D[AG]{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}G{[YC]|[HE]}{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}GTD[AG]{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}G{[YC]|[HE]}{I|L}Y 3.2922;2.8508;2.558;2.4704;2.3998;2.2724;2.029;1.8352;1.7362;1.6781 -;-;-;-;-;-;-;-;-;- 301 1 2.024 59762.2 1.0 5429 3588 9006 DOHH2_400M_050219_1,9019 DOHH2_400M_050219_1,9019,VPDPECELY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9020 51.736 800.0 32710.0 25 0 4245.4 -1 0 41 1023.827075183392 0 1023.827075183392 PEAK CID FTMS 0 0 0 -1 0 14 1 {I|L} 1 -1 5.4846 0.0 0.0 0.26811 0.0 0.0 1721.461082884559 208.0733431451781 1929.534426029737 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.26811 - 4 + 1 2.024 27689.3 0.8299999833106995 5430 3588 9006 DOHH2_400M_050219_1,9020 DOHH2_400M_050219_1,9020, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9021 51.751 800.0 142420.0 25 0 69663.0 -1 0 75 1010.8122124204092 3029.414807861428 3 1011.481311023235 MULTI CID FTMS 0 0 0 9006 153649.609375 0.1958152235253504 3 -0.4081153869628906 15 1 [MN]PYP 5 -1 37.536 0.0 0.0 1.239 0.0 0.0 0.0 2424.12095955504 2424.12095955504 30.08864383480216 0.0 0.0 0.0 0 0.5 2.0 0.0 0.3494850021680094 [MN]PYP 1.239 - 39 1 2.024 79343.9 0.6899999976158142 5431 3588 9006 DOHH2_400M_050219_1,9021 DOHH2_400M_050219_1,9021, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9022 51.754 192.0 318030.0 25 0 22061.0 + 805 AESPPRFYF 9 80 557.2713306955103 1112.5281084578205 2 557.2717773318291 MULTI CID FTMS 0 0 0 9006 136777.25 0.715597740234184 -1 0.1463775634765625 16 Unmodified _AESPPRFYF_ ENSG00000115232|ENST00000397033|ITGA4;ENST00000476824.1_1_2:182363351-182392165:+|nuORF 30.63653989081413 0.1413794767160703 1 {[CP]|[EA]}SPP[PS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG] 11 5 + 32.759 0.0 0.0 2.9446 2.9446 72.179 0.0 0.0 0.0 19.66000413566914 1.2930354201075005 1.2930354201075005 3.762874945799769 0 0.9247425010840048 0.0 0.0 0.0 {[CP]|[EA]}SPP[PS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG];{[CP]|[EA]}SP[TA][R{I|L}]D[PG] 2.9446;2.6063 -;- 96 + 1 2.024 51893.0 1.0 5432 3588 9006 DOHH2_400M_050219_1,9022 DOHH2_400M_050219_1,9022,AESPPRFYF False True AESPPRFYF 51.754454 557.271777331829 1877846.5 9006.0 ENST00000476824.1_1_2:182363351-182392165:+|nuORF;;ENSG00000115232|ENST00000397033|ITGA4 6.913288275400798 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9023 51.762 449.0 120830.0 25 0 29615.0 + 33040 SEPPSIYQW 9 63 1106.5160005985506 1105.5087241319509 1 1106.518481433392 MULTI CID FTMS 0 0 0 9006 136738.875 1.0 0 0.0 17 Unmodified _SEPPSIYQW_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87355723-87398314:+|nuORF 49.93300154707207 0.0405168250806675 1 {I|L}{[ES]|[DT]|[{I|L}C]}YQW 6 4 36.292 0.0 0.0 3.2828 0.0 0.0 281.1378651349625 0.0 281.1378651349625 0.0 26.370090806403468 0.0 0.0 0 0.3807196863200844 0.0 1.079689690656103 0.3807196863200844 {I|L}{[ES]|[DT]|[{I|L}C]}YQW 3.2828 - 107 1 2.024 43695.1 1.0 5433 3588 9006 DOHH2_400M_050219_1,9023 DOHH2_400M_050219_1,9023,SEPPSIYQW True True SEPPSIYQW 51.762475 1106.51848143339 1151796.625 9006.0 ENST00000454465.1_1_2:87355723-87398314:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 7.26016887029012 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9024 51.775 717.0 141570.0 25 0 11780.0 + 37993 TNMLKVVAL 9 142 494.79781777503086 987.5810826168616 2 494.7978088259697 MULTI CID FTMS 0 0 0 9006 129925.8125 1.0 0 0.0 18 Unmodified _TNMLKVVAL_ ENSG00000116830|ENST00000369466|TTF2;ENST00000463696.1_1_1:117637951-117640053:+|nuORF;ENST00000492682.5_1_1:117635418-117640830:+|nuORF 75.76082778847304 0.0188720312721366 1 {[QS]|[NT]}M{I|L} 4 5 45.138 0.0 0.0 4.5705 0.0 0.0 0.0 525.3432645839117 525.3432645839117 20.77401340664515 0.0 0.0 0.0 0 1.1307196863200843 1.0969100130080565 0.2059771852360797 0.8829131673969606 + {[QS]|[NT]}M{I|L} 4.5705 + + 775 1 2.024 82343.7 1.0 5434 3588 9006 DOHH2_400M_050219_1,9024 DOHH2_400M_050219_1,9024,TNMLKVVAL True True TNMLKVVAL 51.774908 494.79780882597 1652316.375 9006.0 ENST00000492682.5_1_1:117635418-117640830:+|nuORF;;ENST00000463696.1_1_1:117637951-117640053:+|nuORF;;ENSG00000116830|ENST00000369466|TTF2 6.427125771840413 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9025 51.79 800.0 149210.0 25 0 16424.0 -1 0 102 922.4538640781276 1842.893175223056 2 922.4516479372978 MULTI CID FTMS 0 0 0 9006 131755.953125 1.0 0 0.0 19 1 {[QV]|[N{I|L}]|[RA]|[KV]}Y{[WS]|[C(Carbamidomethyl (C)){I|L}]}[TP]QNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 96.326 0.0 0.0 5.2269 5.2269 76.128 0.0 0.0 0.0 14.870893426047544 67.76954248601547 14.870893426047544 1.4916623986031396 0 1.0501648626366045 1.6989700043360187 0.0 1.075257498915995 {[QV]|[N{I|L}]|[RA]|[KV]}Y{[WS]|[C(Carbamidomethyl (C)){I|L}]}[TP]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[YC(Carbamidomethyl (C))][TP]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[WS]|[C(Carbamidomethyl (C)){I|L}]}YYNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[YC(Carbamidomethyl (C))]YYNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V{[WS]|[C(Carbamidomethyl (C)){I|L}]}[TP]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[NV]|[RG]}Y{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}[QP][TP]QNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V{[WS]|[C(Carbamidomethyl (C)){I|L}]}YYNA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}[QP]YYNA{M(Oxidation (M))|F}YQV{I|L};[Y{M(Oxidation (M))|F}]Q[QP][TP]QNA{M(Oxidation (M))|F}YQV{I|L} 5.2269;5.146;4.8639;4.7829;4.305;4.2783;4.224;3.942;3.861;3.8018 -;-;-;-;-;-;-;-;-;- 1059 1 2.024 84540.8 0.6499999761581421 5435 3588 9006 DOHH2_400M_050219_1,9025 DOHH2_400M_050219_1,9025, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9026 51.804 800.0 96521.0 25 0 5656.1 -1 0 102 915.442024762134 1828.869496591068 2 914.4344360232352 MULTI CID FTMS 0 0 0 9006 120093.578125 0.3065311243598471 2 -0.3050270080566406 20 1 [YQ][EP]EAQQNA{M(Oxidation (M))|F}Y 12 -1 47.63 0.0 0.0 2.6043 0.0 0.0 0.0 357.2155541963279 357.2155541963279 23.192672072328904 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.3807196863200844 [YQ][EP]EAQQNA{M(Oxidation (M))|F}Y 2.6043 - 909 1 2.024 54418.5 0.5699999928474426 5436 3588 9006 DOHH2_400M_050219_1,9026 DOHH2_400M_050219_1,9026, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9028 51.809 4.8 5466200.0 25 0 502500.0 + 843 AETPDIKLF 9 53 517.2814513798171 1032.548349826434 2 517.2824584841728 MULTI CID FTMS 0 0 0 9027 4374945.0 0.0599522048162986 2 -0.201324462890625 1 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 16.565877749689598 0.3882643987948875 1 {I|L}DP[WP] 5 8 20.19 0.0 0.0 1.9553 0.0 0.0 406.2576466291032 0.0 406.2576466291032 0.0 0.1844655354022961 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}DP[WP] 1.9553 - 51 1 2.024 27279.4 1.0 5437 3589 9027 DOHH2_400M_050219_1,9028 DOHH2_400M_050219_1,9028,AETPDIKLF False True AETPDIKLF 51.808562 517.282458484173 944082176.0 9027.0 ENSG00000083845|ENST00000196551|RPS5;;ENST00000599909.1_1_19:58899504-58899627:+|nuORF;;ENST00000598807.1_1_19:58899504-58905010:+|nuORF 8.013208071390787 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9029 51.81 43.0 766860.0 25 0 185720.0 + 39630 VDSLYVIYVY 10 45 617.3213627496233 1232.6281725660465 2 617.3218871951103 MULTI CID FTMS 0 0 0 9027 452637.96875 0.0617881639247454 2 -0.201324462890625 2 Unmodified _VDSLYVIYVY_ REV__ENST00000356577.8_2_21:34948883-34949093:+|nuORF 14.838274106304384 0.5985701837916485 1 YY{I|L}V[WD]{I|L}VY 9 -1 YY{I|L}V[WD]{I|L} + + 24.464 8.2045 0.86138 1.9847 1.9847 48.884 0.0 0.0 0.0 0.0 12.235293763427531 0.0 0.0 0 0.5 0.0 0.0 0.0 YY{I|L}V[WD]{I|L}VY 1.9847 - 63 + 1 2.024 33725.7 1.0 5438 3589 9027 DOHH2_400M_050219_1,9029 DOHH2_400M_050219_1,9029,VDSLYVIYVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9030 51.811 31.0 2917000.0 25 0 266300.0 + 4807 DEQTPIHISW 10 101 613.2957940011767 1224.5770350691532 2 613.2962524294853 MULTI CID FTMS 0 0 0 9027 1823623.375 0.3770713873871899 -1 0.2067909240722656 3 Unmodified _DEQTPIHISW_ ENSG00000100526|ENST00000335183|CDKN3 45.739877483867886 0.1051543674217965 1 [H{I|L}]PT[R{M(Oxidation (M))|F}][DP]GW 10 8 + 44.824 0.0 0.0 3.6604 3.6604 69.519 0.0 0.0 0.0 6.626269274656025 18.97772252302282 6.626269274656025 0.4666519026153182 0 0.9361818737241736 1.154901959985743 0.4247425010840047 0.0 [H{I|L}]PT[R{M(Oxidation (M))|F}][DP]GW;[H{I|L}]P{I|L}ST[WE]G{[DA]|[EG]};[H{I|L}]PTVT[WE]G{[DA]|[EG]};[H{I|L}]P{I|L}TS[WE]G{[DA]|[EG]};[H{I|L}]PT{I|L}S[WE]G{[DA]|[EG]};[H{I|L}]P[DP]{I|L}[YQ]G{[DA]|[EG]};[H{I|L}]P{I|L}[YQ][DP]G{[DA]|[EG]};[H{I|L}]P{I|L}[DP][YQ]G{[DA]|[EG]};[H{I|L}]P{I|L}ST[WQ]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[H{I|L}]PTVT[WQ]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.6604;3.6223;3.5202;3.2545;3.1525;3.0547;3.014;2.7484;2.1968;2.0947 -;-;-;-;-;-;-;-;-;- 491 1 2.024 72619.3 1.0 5439 3589 9027 DOHH2_400M_050219_1,9030 DOHH2_400M_050219_1,9030,DEQTPIHISW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9031 51.812 57.0 1241000.0 25 0 182590.0 + 1220 AIHTAILTL 9 75 476.79493735128347 951.575321769367 2 476.7951232790947 MULTI CID FTMS 0 0 0 9027 1179094.5 0.2672640979862618 -1 0.2067909240722656 4 Unmodified _AIHTAILTL_ ENSG00000106588|ENST00000223321|PSMA2 89.42679046578446 0.015225546354407 1 [{I|L}T][HA]A{I|L}{I|L}T{I|L} 9 2 + 66.079 0.0 0.0 6.9442 6.9442 85.225 0.0 0.0 0.0 10.386277828772135 25.96787486224656 10.386277828772135 4.005149978319906 0 1.1435078169319297 1.5228787452803376 1.9291746928241125 0.0 [{I|L}T][HA]A{I|L}{I|L}T{I|L};[{I|L}T][HA]{I|L}A{I|L}T{I|L};[{I|L}T]{I|L}[HA]A{I|L}T{I|L};[{I|L}T][HA]A{I|L}T{I|L}{I|L};[{I|L}T][HA]{I|L}AT{I|L}{I|L};[HT][{I|L}A]A{I|L}{I|L}T{I|L};[HT][{I|L}A]{I|L}A{I|L}T{I|L};[{I|L}T]{I|L}[HA]AT{I|L}{I|L};[H{I|L}]{I|L}ATA{I|L}T{I|L};[HT][{I|L}A]A{I|L}T{I|L}{I|L} 6.9442;6.5233;5.7606;5.6078;5.1869;5.1453;4.7244;4.4242;3.9974;3.8089 -;-;-;-;-;-;-;-;-;- 591 1 2.024 56894.2 1.0 5440 3589 9027 DOHH2_400M_050219_1,9031 DOHH2_400M_050219_1,9031,AIHTAILTL True True AIHTAILTL 51.812383 476.795123279095 54881632.0 9027.0 ENSG00000106588|ENST00000223321|PSMA2 4.164509693781535 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9032 51.815 123.0 610190.0 25 0 78678.0 + 33710 QIDEIKDPSGLFY 13 92 762.882937445952 1523.751321958704 2 762.8832885622978 MULTI CID FTMS 0 0 0 9027 488241.09375 1.0 0 0.0 5 Unmodified _SKRSYFLQWFY_ nc|ENSG00000075089|Q9GZN1-2|ACTR6;ENST00000550813.5_1_12:100594629-100599999:+|nuORF;ENST00000551440.1_1_12:100594629-100598862:+|nuORF;ENSG00000075089|ENST00000188312|ACTR6 13.042465956692816 0.7638483625850725 1 [Q{I|L}]DQ{I|L}{M(Oxidation (M))|F}P[HS]{I|L} 10 10 71.902 0.0 0.0 4.7188 0.0 0.0 0.0 342.14219275013187 342.14219275013187 45.55392138153556 0.0 0.0 0.0 0 1.0 2.0 1.1307196863200843 2.06295299324845 [Q{I|L}]DQ{I|L}{M(Oxidation (M))|F}P[HS]{I|L} 4.7188 - 2154 1 2.024 59598.8 1.0 5441 3589 9027 DOHH2_400M_050219_1,9032 DOHH2_400M_050219_1,9032,SKRSYFLQWFY False False QIDEIKDPSGLFY 51.814955 762.883288562298 3428610.25 9027.0 nc|ENSG00000075089|Q9GZN1-2|ACTR6;;ENST00000550813.5_1_12:100594629-100599999:+|nuORF;;ENST00000551440.1_1_12:100594629-100598862:+|nuORF;;ENSG00000075089|ENST00000188312|ACTR6 8.267581939697266 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9033 51.818 155.0 498130.0 25 0 49413.0 + 41308 VPHTVTLPIEL 11 64 406.9083550993663 1217.7032358982988 3 406.9082824587822 MULTI CID FTMS 0 0 0 9027 368308.375 1.0 0 0.0 6 Unmodified _VPHTVTLPIEL_ REV__ENSG00000175899|ENST00000318602|A2M 16.149105407346934 0.6992268271266642 1 E{I|L}{I|L} 3 -1 31.343 0.0 0.0 2.574 0.0 0.0 844.4823591504509 0.0 844.4823591504509 0.0 20.37401551688937 0.0 0.0 0 0.6861818737241735 0.0 0.3054621874040891 0.0 E{I|L}{I|L} 2.574 - 104 1 2.024 67102.9 1.0 5442 3589 9027 DOHH2_400M_050219_1,9033 DOHH2_400M_050219_1,9033,VPHTVTLPIEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9034 51.821 151.0 639640.0 25 0 31100.0 + 15983 ITDLPDHLLSY 11 107 643.8349383560701 1285.65532377894 2 643.8351928591728 MULTI CID FTMS 0 0 0 9027 356883.75 0.299130134133788 -2 0.3531684875488281 7 Unmodified _ITDLPDHLLSY_ ENSG00000219545|ENST00000682710|UMAD1;ENST00000406829.2_2_7:7812042-7917166:+|nuORF 96.36657018975838 0.0004425842802536 1 [{I|L}T]D{I|L}[{M(Oxidation (M))|F}T]T{I|L}{I|L}SY 11 3 + 73.808 0.0 0.0 5.7409 5.7409 76.363 0.0 0.0 0.0 0.3030216478703949 8.704143388663553 0.3030216478703949 0.2287874528033739 0 2.3182503180159344 2.0 0.9947026752325154 0.0 [{I|L}T]D{I|L}[{M(Oxidation (M))|F}T]T{I|L}{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]{I|L}SE{I|L}{I|L}SY;[{I|L}T]D[{M(Oxidation (M))|F}T]{I|L}T{I|L}{I|L}SY;[{I|L}T]D{I|L}[WY]{I|L}{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]{I|L}S{I|L}E{I|L}SY;{I|L}T[{M(Oxidation (M))|F}V]YSPP{I|L}SY;[{I|L}T]D[{M(Oxidation (M))|F}T]T{I|L}{I|L}{I|L}SY;[{I|L}T]D{I|L}{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}{I|L}{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]{I|L}DT{I|L}{I|L}SY;[{I|L}T]D{I|L}[{M(Oxidation (M))|F}T]{I|L}T{I|L}SY 5.7409;5.7231;5.6833;5.6005;5.5266;5.5264;5.4492;5.4096;5.3728;5.3698 -;-;-;-;-;-;-;-;-;- 5558 1 2.024 83645.6 1.0 5443 3589 9027 DOHH2_400M_050219_1,9034 DOHH2_400M_050219_1,9034,ITDLPDHLLSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9035 51.824 147.0 476510.0 25 0 48571.0 + 459 AEFQSIPRVF 10 86 597.3191211646596 1192.623689396119 2 597.3196899294853 MULTI CID FTMS 0 0 0 9027 338847.53125 1.0 0 0.0 8 Unmodified _AEFQSIPRVF_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 49.55428908609986 0.0827668555218455 1 {[CP]|[EA]}{M(Oxidation (M))|F}QS{I|L}P 7 3 55.534 0.0 0.0 4.6564 0.0 0.0 0.0 417.2259920709594 417.2259920709594 23.05462187404089 0.0 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.3807196863200844 + {[CP]|[EA]}{M(Oxidation (M))|F}QS{I|L}P 4.6564 + + 129 + 1 2.024 56626.7 1.0 5444 3589 9027 DOHH2_400M_050219_1,9035 DOHH2_400M_050219_1,9035,AEFQSIPRVF True True AEFQSIPRVF 51.823993 597.319689929485 2517429.25 9027.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 6.008803526560466 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9036 51.828 204.0 335820.0 25 0 27260.0 + 25453 NEIEDTFRQF 10 77 649.8038104848894 1297.5930680365786 2 649.8043090701103 MULTI CID FTMS 0 0 0 9027 269987.90625 0.0104918727187898 3 -0.2721900939941406 9 Unmodified _NEIEDTFRQF_ ENSG00000128524|ENST00000249289|ATP6V1F 74.19965305603844 0.0188013450058842 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F} 10 0 + 67.573 0.0 0.0 5.2076 5.2076 84.187 0.0 0.0 0.0 57.391918197774245 7.909806428912738 7.909806428912738 9.164539485499256 0 1.0 0.0 0.8494850021680094 0.6989700043360187 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}[VG]Q{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}R[AG]{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EY{[CP]|[EA]}RQ{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}[VG][AG]{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EY{[CP]|[EA]}[VG]Q{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EY{[CP]|[EA]}R[AG]{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ED[HK]{[MS]|[{M(Oxidation (M))|F}A]}[VP] 5.2076;4.5013;4.29;3.7625;3.2591;3.0563;2.8449;2.354 +;-;-;-;-;-;-;- + 199 + 1 2.024 58348.0 1.0 5445 3589 9027 DOHH2_400M_050219_1,9036 DOHH2_400M_050219_1,9036,NEIEDTFRQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9037 51.838 587.0 207860.0 25 0 11331.0 + 32686 SDTSDIVHIW 10 138 586.7825548566625 1171.550556780125 2 586.7830078005791 MULTI CID FTMS 0 0 0 9027 160390.15625 0.839922358708527 -1 0.2067909240722656 10 Unmodified _SDTSDIVHIW_ ENSG00000151725|ENST00000281453|CENPU;nc|ENSG00000151725|Q71F23-3|CENPU 100.37149154755038 0.0085903855881088 1 [H{I|L}]VDST{I|L}[WD]S 10 9 + 53.409 0.0 0.0 4.5588 4.5588 79.114 0.0 0.0 0.0 0.4303074521114212 6.881295354770387 0.4303074521114212 6.064921830680703 0 0.0 1.0969100130080565 0.3054621874040891 0.0 [H{I|L}]VDST{I|L}[WD]S;[H{I|L}]VDS{I|L}T[WD]S;[HV]{I|L}DST{I|L}[WD]S;[H{I|L}]VDS{I|L}W{[ES]|[DT]|[{I|L}C]}S;[H{I|L}]VD{I|L}ST[WD]S;[H{I|L}]VDSTTP{[ES]|[DT]|[{I|L}C]}S;[H{I|L}]VD{I|L}SW{[ES]|[DT]|[{I|L}C]}S;[H{I|L}]V{I|L}DST[WD]S;[HV]{I|L}DS{I|L}T[WD]S;[H{I|L}]V{I|L}DSW{[ES]|[DT]|[{I|L}C]}S 4.5588;4.0412;3.8309;3.7842;3.7842;3.6752;3.5273;3.4445;3.3133;3.1876 -;-;-;-;-;-;-;-;-;- 1720 1 2.024 98654.9 1.0 5446 3589 9027 DOHH2_400M_050219_1,9037 DOHH2_400M_050219_1,9037,SDTSDIVHIW True True SDTSDIVHIW 51.838183 586.783007800579 1140776.625 9027.0 ENSG00000151725|ENST00000281453|CENPU;;nc|ENSG00000151725|Q71F23-3|CENPU 7.398509661356608 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9038 51.846 453.0 212110.0 25 0 30870.0 + -1 LLIGILFHKRC 11 107 457.27642442653394 1368.807443879802 3 457.6111022830009 MULTI CID FTMS 0 0 0 9027 148797.90625 1.0 0 0.0 11 Carbamidomethyl (C) _LLIGILFHKRC(Carbamidomethyl (C))_ REV__ENSG00000135905|ENST00000258390|DOCK10;REV__nc|ENSG00000135905|Q96BY6-3|DOCK10 0.5059551277355931 0.8727608062196215 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 2.024 84677.0 1.0 5447 3589 9027 DOHH2_400M_050219_1,9038 DOHH2_400M_050219_1,9038,LLIGILFHKRC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9039 51.856 547.0 226120.0 25 0 51807.0 + 31736 RRSPFLQVF 9 90 575.3297193813504 1148.6448858295007 2 575.3303100466728 MULTI CID FTMS 0 0 0 9027 124841.6875 0.6299620581539489 -1 0.2067909240722656 12 Unmodified _RRSPFLQVF_ ENSG00000101310|ENST00000650089|SEC23B 17.44264345198275 0.3645313841742926 1 QV{M(Oxidation (M))|F} 3 6 32.056 0.0 0.0 2.7908 0.0 0.0 756.4397007250695 0.0 756.4397007250695 0.0 12.592254816411156 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.4247425010840047 + QV{M(Oxidation (M))|F} 2.7908 + + 87 1 2.024 97208.6 1.0 5448 3589 9027 DOHH2_400M_050219_1,9039 DOHH2_400M_050219_1,9039,RRSPFLQVF False True RRSPFLQVF 51.855818 575.330310046673 1490799.375 9027.0 ENSG00000101310|ENST00000650089|SEC23B 4.65372387568156 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9040 51.87 800.0 139730.0 25 0 18293.0 + 36824 TEKPLGELW 9 138 536.7867610781614 1071.5589692231226 2 536.7876464724541 MULTI CID FTMS 0 0 0 9027 108102.5078125 1.0 0 0.0 13 Unmodified _TEKPLGELW_ ENSG00000168393|ENST00000305784|DTYMK;nc|ENSG00000168393|P23919-2|DTYMK 47.74868867922204 0.0453060283459952 1 {[DS]|[MA]|[CV]|TT}PPKET{I|L}W 9 5 + 59.002 0.0 0.0 5.5061 5.5061 75.589 0.0 0.0 0.0 0.3269480461010232 9.208187539523747 0.3269480461010232 0.3269480461010232 0 0.9247425010840048 0.0 1.1952349168877847 0.0 {[DS]|[MA]|[CV]|TT}PPKET{I|L}W;[{I|L}P]GEKET{I|L}W;{[QN]|[E{I|L}]|[KN]}GPKET{I|L}W;{[DA]|[EG]}{I|L}PKET{I|L}W;[{I|L}P]KDAET{I|L}W;[{I|L}P]GTRET{I|L}W;{[DS]|[MA]|[CV]|TT}PP{I|L}[SG]T{I|L}W;[{I|L}P]GE{I|L}[SG]T{I|L}W;[{I|L}P]G[VS]AET{I|L}W;{[QN]|[E{I|L}]|[KN]}GP{I|L}[SG]T{I|L}W 5.5061;5.4756;4.9472;4.7954;4.7495;4.5424;4.3659;4.3354;3.8901;3.807 -;-;-;-;-;-;-;-;-;- 1481 1 2.024 89693.5 0.4799999892711639 5449 3589 9027 DOHH2_400M_050219_1,9040 DOHH2_400M_050219_1,9040,TEKPLGELW True True TEKPLGELW 51.869649 536.787646472454 1130945.875 9027.0 ENSG00000168393|ENST00000305784|DTYMK;;nc|ENSG00000168393|P23919-2|DTYMK 3.671090841293335 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9041 51.879 505.0 113690.0 25 0 5910.5 + 6635 EATRDHHRR 9 105 589.3027508256428 1176.5909487180854 2 589.3028442263603 MULTI CID FTMS 0 0 0 9027 104612.90625 0.2178488556764745 1 -0.098236083984375 14 Unmodified _EATRDHHRR_ REV__ENST00000528251.1_2_11:77790746-77790857:-|nuORF 10.823927491677226 0.5436922275383211 1 {[CP]|[EA]}T 3 -1 15.458 0.0 0.0 1.3138 0.0 0.0 0.0 872.4404109585729 872.4404109585729 0.5090746888058124 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[CP]|[EA]}T 1.3138 + + 111 1 2.024 47815.6 1.0 5450 3589 9027 DOHH2_400M_050219_1,9041 DOHH2_400M_050219_1,9041,EATRDHHRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9042 51.888 478.0 80601.0 25 0 9096.5 + 14149 ICKVLHSLIAK 11 60 408.9226653908968 1223.7461667728903 3 408.9221679568291 MULTI CID FTMS 0 0 0 9027 92861.9765625 1.0 0 0.0 15 Unmodified _ICKVLHSLIAK_ REV__ENSG00000104093|ENST00000560891|DMXL2;REV__ENSG00000172869|ENST00000539542|DMXL1;REV__nc|ENSG00000104093|Q8TDJ6-3|DMXL2;REV__nc|ENSG00000104093|Q8TDJ6|DMXL2;REV__nc|ENSG00000172869|Q9Y485|DMXL1 0.5059551277355931 0.8727608062196215 1 {M(Oxidation (M))|F} 1 -1 10.278 0.0 0.0 0.83985 0.0 0.0 1058.6667733176157 0.0 1058.6667733176157 0.0 3.287886595888967 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.83985 - 6 + 1 2.024 34987.8 1.0 5451 3589 9027 DOHH2_400M_050219_1,9042 DOHH2_400M_050219_1,9042,ICKVLHSLIAK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9043 51.902 800.0 159290.0 25 0 53248.0 -1 0 86 633.3543616194606 632.3470851528606 1 633.3546020388603 MULTI CID FTMS 0 0 0 9027 186202.5 1.0 0 0.0 16 1 Y 1 -1 12.474 0.0 0.0 1.9727 0.0 0.0 451.2730475325465 0.0 451.2730475325465 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.9727 - 16 + 1 2.024 99397.9 0.6899999976158142 5452 3589 9027 DOHH2_400M_050219_1,9043 DOHH2_400M_050219_1,9043, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9045 51.913 380.0 216750.0 25 0 42404.0 + 7695 EKSTYILKLL 10 92 604.3668530095534 1206.7191530859068 2 604.3669921755791 MULTI CID FTMS 0 0 0 9044 188369.234375 0.4038288474333071 2 -0.1739540100097656 1 Unmodified _EKSTYILKLL_ REV__ENSG00000163625|ENST00000295888|WDFY3;REV__nc|ENSG00000163625|Q8IZQ1-2|WDFY3 0.6268255596534771 0.7237370565709429 1 Y 1 -1 12.764 0.0 0.0 1.0578 0.0 0.0 1025.6448255486005 0.0 1025.6448255486005 0.0 0.9814732257198422 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0578 + + 53 + 1 2.024 62757.0 1.0 5453 3590 9044 DOHH2_400M_050219_1,9045 DOHH2_400M_050219_1,9045,EKSTYILKLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9046 51.915 111.0 734670.0 25 0 134100.0 + 5353 DLIIKGISV 9 84 479.3023967506642 956.5902405681284 2 479.3024474978447 MULTI CID FTMS 0 0 0 9044 574045.375 0.4045016096429366 -1 0.098236083984375 2 Unmodified _DLIIKGISV_ ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP 43.77239144664712 0.0547478964384323 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L} 4 5 47.307 0.0 0.0 4.9454 0.0 0.0 0.0 499.2891683925321 499.2891683925321 27.8532618765346 0.0 0.0 0.0 0 1.110924374808178 2.0 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L} 4.9454 + + 272 + 1 2.024 66524.9 1.0 5454 3590 9044 DOHH2_400M_050219_1,9046 DOHH2_400M_050219_1,9046,DLIIKGISV True True DLIIKGISV 51.915045 479.302447497845 15871694.0 9044.0 ENSG00000120948|ENST00000240185|TARDBP;;nc|ENSG00000120948|Q13148-4|TARDBP 4.285531202952067 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9047 51.918 157.0 309250.0 25 0 26361.0 + 17438 KNFDMVIVY 9 73 564.7909813036321 1127.567409674064 2 564.7917358279228 MULTI CID FTMS 0 0 0 9044 321421.5 1.0 0 0.0 3 Unmodified _KNFDMVIVY_ ENSG00000092201|ENST00000216297|SUPT16H 41.8396318013385 0.0653578398400075 1 {I|L}VM[HS]VY 7 6 41.286 0.0 0.0 3.6615 0.0 0.0 280.14007921949616 0.0 280.14007921949616 0.0 34.29637907846235 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.0 {I|L}VM[HS]VY 3.6615 - 67 + 1 2.024 47678.2 1.0 5455 3590 9044 DOHH2_400M_050219_1,9047 DOHH2_400M_050219_1,9047,KNFDMVIVY True True KNFDMVIVY 51.918155 564.791735827923 2115085.5 9044.0 ENSG00000092201|ENST00000216297|SUPT16H 7.553918838500977 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9048 51.923 248.0 379870.0 25 0 29414.0 + 33103 SESLLRGIYAY 11 85 636.3349859810462 1270.6554190288923 2 636.3353149294853 MULTI CID FTMS 0 0 0 9044 241127.125 1.0 0 0.0 4 Unmodified _SESLLRGIYAY_ ENSG00000161960|ENST00000293831|EIF4A1;ENST00000550578.1_1_12:53547103-53547616:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584054.5_1_17:7476159-7478064:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1 61.16457814134879 0.0644188075391754 1 G{I|L}YAY 5 6 45.745 0.0 0.0 3.6001 0.0 0.0 685.3756581037125 0.0 685.3756581037125 0.0 17.11249690339386 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.0 + G{I|L}YAY 3.6001 + + 79 1 2.024 74460.8 1.0 5456 3590 9044 DOHH2_400M_050219_1,9048 DOHH2_400M_050219_1,9048,SESLLRGIYAY True True SESLLRGIYAY 51.922784 636.335314929485 1498588.75 9044.0 ENST00000582848.5_1_17:7476159-7480015:+|nuORF;;ENST00000584054.5_1_17:7476159-7478064:+|nuORF;;ENST00000550578.1_1_12:53547103-53547616:+|nuORF;;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;;ENST00000580461.5_1_17:7476163-7478717:+|nuORF 8.473159631093344 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9049 51.931 489.0 302260.0 25 0 17224.0 + 34029 SLKERFAFL 9 144 555.8189758687993 1109.6233988043984 2 555.8192016482353 MULTI CID FTMS 0 0 0 9044 224047.984375 1.0 0 0.0 5 Unmodified _SLKERFAFL_ ENSG00000064726|ENST00000261721|BTBD1;nc|ENSG00000064726|Q9H0C5-2|BTBD1 71.70789743142352 0.0204387454931768 1 {I|L}SKEP 5 7 54.826 0.0 0.0 4.9409 0.0 0.0 0.0 552.3014620416624 552.3014620416624 31.47940008672037 0.0 0.0 0.0 0 0.6861818737241735 1.6989700043360187 0.3807196863200844 0.0 {I|L}SKEP 4.9409 - 1514 + 1 2.024 112078.7 1.0 5457 3590 9044 DOHH2_400M_050219_1,9049 DOHH2_400M_050219_1,9049,SLKERFAFL True True SLKERFAFL 51.931434 555.819201648235 1330745.0 9044.0 nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1 4.113059043884277 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9050 51.941 558.0 157360.0 25 0 25652.0 + 41124 VNVLQQVVL 9 94 506.31352462748976 0 506.3133117556572 PEAK CID FTMS 0 0 0 9044 173409.125 0.6498150066250991 1 -0.10308837890625 6 Unmodified _VNVLQQVVL_ REV__ENSG00000158158|ENST00000377075|CNNM4 11.640296217721598 0.2934555500198502 1 VVV 3 -1 22.945 0.0 0.0 2.2704 0.0 0.0 131.09688460478577 579.2895760353703 710.386460640156 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 VVV 2.2704 - 54 + 1 2.024 72858.7 1.0 5458 3590 9044 DOHH2_400M_050219_1,9050 DOHH2_400M_050219_1,9050,VNVLQQVVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9051 51.952 634.0 342010.0 25 0 28759.0 + 4731 DEEQVFHFY 9 145 607.2618207998911 1212.509088666582 2 607.2620117068291 MULTI CID FTMS 0 0 0 9044 136749.03125 0.2309259171111512 -2 0.3050270080566406 7 Unmodified _DEEQVFHFY_ ENSG00000101868|ENST00000379068|POLA1;nc|ENSG00000101868|P09884|POLA1 88.90359156742426 0.0153595091083554 1 {[{M(Oxidation (M))|F}H]|[RQ]}VQEAQE 8 8 69.383 0.0 0.0 5.7223 0.0 0.0 0.0 241.04664072955293 241.04664072955293 39.22773663651751 0.0 0.0 0.0 0 1.066901560044258 1.3010299956639813 1.1237125054200234 1.1382104921644451 {[{M(Oxidation (M))|F}H]|[RQ]}VQEAQE 5.7223 - 1621 1 2.024 157196.7 1.0 5459 3590 9044 DOHH2_400M_050219_1,9051 DOHH2_400M_050219_1,9051,DEEQVFHFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9052 51.966 800.0 162310.0 25 0 21289.0 + 4823 DEVFFSEKIY 10 117 638.8077780095371 1275.601003085874 2 638.8088256716728 MULTI CID FTMS 0 0 0 9044 116604.3125 1.0 0 0.0 8 Unmodified _DEVFFSEKIY_ ENSG00000041357|ENST00000044462|PSMA4;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;ENST00000560033.5_1_15:78834730-78834988:+|nuORF 69.33821966488729 0.0189579340102328 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}SEK{I|L}Y 10 0 + 66.239 0.0 0.0 5.1928 5.1928 87.638 0.0 0.0 0.0 32.85668114126445 6.999106877313139 6.999106877313139 14.858669217302072 0 2.2614393726401687 0.0 0.6694451763165201 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}SEK{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}KE{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}KE{[ES]|[DT]|[{I|L}C]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{M(Oxidation (M))|F}E{[ES]|[DT]|[{I|L}C]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{[QG]|[NA]}[SG]Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}KE{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}S{I|L}{I|L}[SG]Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[WT]|[RM]}[VS];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}S[YR][{I|L}T];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V[QA]E{I|L}KE{[ES]|[DT]|[{I|L}C]} 5.1928;4.0279;4.009;3.952;3.8618;3.6183;3.5447;2.8489;2.6188;2.5642 +;-;-;-;-;-;-;-;-;- + 1731 + 1 2.024 102626.6 0.5299999713897705 5460 3590 9044 DOHH2_400M_050219_1,9052 DOHH2_400M_050219_1,9052,DEVFFSEKIY True True DEVFFSEKIY 51.966119 638.808825671673 767897.1875 9044.0 ENSG00000041357|ENST00000044462|PSMA4;;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;;ENST00000560033.5_1_15:78834730-78834988:+|nuORF 7.482773303985596 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9053 51.98 800.0 327160.0 25 0 38190.0 + 30999 RLEIEPEWAY 10 123 653.3268523400283 1304.6391517468564 2 653.3276855349541 MULTI CID FTMS 0 0 0 9044 168482.109375 0.8003853154078657 -1 0.098236083984375 9 Unmodified _RLEIEPEWAY_ ENSG00000100442|ENST00000396062|FKBP3 42.312485326615175 0.1331477410672653 1 {[QN]|[E{I|L}]|[KN]}R{I|L}EPEGEAY 11 4 + 85.034 0.0 0.0 6.5178 6.5178 81.156 0.0 0.0 0.0 13.097817632201824 54.5838110122736 13.097817632201824 1.8045606445813007 0 1.6549471895720984 0.619788758288394 0.3807196863200844 0.6989700043360187 {[QN]|[E{I|L}]|[KN]}R{I|L}EPEGEAY;{[QN]|[E{I|L}]|[KN]}R{I|L}EPEWAY;{[QN]|[E{I|L}]|[KN]}RNKPEGEAY;{[QN]|[E{I|L}]|[KN]}RNKPEWAY;{[QN]|[E{I|L}]|[KN]}R{I|L}EPEGAEY;{[QN]|[E{I|L}]|[KN]}R{I|L}EPEQEY;{[QN]|[E{I|L}]|[KN]}RNKPEGAEY;{[QN]|[E{I|L}]|[KN]}RGGKPEGEAY;{[QN]|[E{I|L}]|[KN]}RNKPEQEY;{[QN]|[E{I|L}]|[KN]}RGGKPEWAY 6.5178;6.3795;6.0563;5.918;5.8667;5.7284;5.4052;5.3566;5.2669;5.2156 -;-;-;-;-;-;-;-;-;- 1273 1 2.024 193208.4 0.6399999856948853 5461 3590 9044 DOHH2_400M_050219_1,9053 DOHH2_400M_050219_1,9053,RLEIEPEWAY False True RLEIEPEWAY 51.979953 653.327685534954 1610879.0 9044.0 ENSG00000100442|ENST00000396062|FKBP3 5.512251853942871 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9054 51.995 800.0 63479.0 25 0 3472.5 -1 0 86 1029.8307320796832 3086.47036683925 3 1030.493212878704 MULTI CID FTMS 0 0 0 9044 152903.8125 0.0743096473593365 6 -0.61712646484375 10 1 [MN]P{[QN]|[E{I|L}]|[KN]}V[WC(Carbamidomethyl (C))]{M(Oxidation (M))|F} 9 -1 23.591 0.0 0.0 0.76434 0.0 0.0 0.0 1906.8967333766125 1906.8967333766125 4.38302467346006 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MN]P{[QN]|[E{I|L}]|[KN]}V[WC(Carbamidomethyl (C))]{M(Oxidation (M))|F} 0.76434 - 317 1 2.024 42738.1 0.6299999952316284 5462 3590 9044 DOHH2_400M_050219_1,9054 DOHH2_400M_050219_1,9054, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9055 52.005 561.0 218890.0 25 0 16312.0 + 11187 GEMPPGLNF 9 146 481.2257051437461 960.436857354292 2 481.2259094119072 MULTI CID FTMS 0 0 0 9044 136435.046875 0.6653154647862963 -2 0.3050270080566406 11 Unmodified _GEMPPGLNF_ ENSG00000162735|ENST00000368072|PEX19 62.57269311338072 0.0246576765497938 1 {[DA]|[EG]}MP[PG]{I|L}N{M(Oxidation (M))|F} 9 0 + 47.59 0.0 0.0 4.955 4.955 74.914 0.0 0.0 0.0 5.440024048417428 22.71484757722305 5.440024048417428 1.275910229652979 0 1.6989700043360187 1.3979400086720375 0.0 0.0 + + {[DA]|[EG]}MP[PG]{I|L}N{M(Oxidation (M))|F};{[DA]|[EG]}PVPAMN{M(Oxidation (M))|F};{[DA]|[EG]}PM[PG]{I|L}N{M(Oxidation (M))|F};{[DA]|[EG]}MP[PG]{I|L}GG{M(Oxidation (M))|F};{[DA]|[EG]}PVPAMGG{M(Oxidation (M))|F};{[DA]|[EG]}PM[PG]{I|L}GG{M(Oxidation (M))|F};{[VA]|[{I|L}G]}PPDAMN{M(Oxidation (M))|F};[PG]{I|L}PDAMN{M(Oxidation (M))|F};{[VA]|[{I|L}G]}PPGEMN{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[PG]PAMN{M(Oxidation (M))|F} 4.955;4.8222;4.5866;3.9963;3.8634;3.6278;3.5675;3.1935;3.0702;2.9175 +;-;-;-;-;-;-;-;-;- + 753 1 2.024 98516.3 1.0 5463 3590 9044 DOHH2_400M_050219_1,9055 DOHH2_400M_050219_1,9055,GEMPPGLNF True True GEMPPGLNF 52.0051 481.225909411907 4388956.5 9044.0 ENSG00000162735|ENST00000368072|PEX19 7.906605402628581 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9057 52.023 800.0 55565.0 25 0 10806.0 25896 NLIVIIFVYIY 11 76 685.4115141497126 1368.8084753662251 2 685.4121581912041 MULTI CID FTMS 0 0 0 9056 45203.3828125 0.2504132270749426 2 -0.2152023315429687 1 Unmodified _NLIVIIFVYIY_ ENSG00000250366|ENST00000678517|TUNAR;nc|ENSG00000250366|A0A1B0GTB2|TUNAR 1.3296431237094175 0.8688745925763601 1 YMMNQ 5 11 23.513 0.0 0.0 1.7178 0.0 0.0 683.5612352312627 0.0 683.5612352312627 0.0 10.414478256039672 0.0 0.0 0 0.0 0.0 0.0 0.2059771852360797 YMMNQ 1.7178 - 58 + 1 2.024 43600.8 0.5199999809265137 5464 3591 9056 DOHH2_400M_050219_1,9057 DOHH2_400M_050219_1,9057,NLIVIIFVYIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9058 52.025 87.0 538620.0 25 0 38251.0 + 22925 LSDVFPGVQY 10 84 562.78482072791 1123.5550885226198 2 562.7850829958916 MULTI CID FTMS 0 0 0 9056 430408.25 1.0 0 0.0 2 Unmodified _LSDVFPGVQY_ ENSG00000197102|ENST00000360184|DYNC1H1 34.40172386719151 0.2166836008404837 1 {[TV]|[{I|L}S]}DV{M(Oxidation (M))|F}[RP]QY 9 2 {[TV]|[{I|L}S]}DV + + 23.283 9.8871 2.3869 2.0723 2.0723 48.942 0.0 0.0 0.0 0.0 9.2632542069118 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 {[TV]|[{I|L}S]}DV{M(Oxidation (M))|F}[RP]QY 2.0723 - 178 + 1 2.024 41361.2 1.0 5465 3591 9056 DOHH2_400M_050219_1,9058 DOHH2_400M_050219_1,9058,LSDVFPGVQY False True LSDVFPGVQY 52.024752 562.785082995892 2698893.5 9056.0 ENSG00000197102|ENST00000360184|DYNC1H1 5.829902648925781 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9059 52.03 272.0 332560.0 25 0 27875.0 + 13356 HLFPKLEL 8 108 498.79689764019145 995.5792423471828 2 498.7973205447197 MULTI CID FTMS 0 0 0 9056 224174.0 0.9708158483931176 -1 0.10308837890625 3 Unmodified _HLFPKLEL_ ENSG00000144028|ENST00000323853|SNRNP200 58.6788170122104 0.1149141431586871 1 {I|L}H{M(Oxidation (M))|F}PK{I|L}E{I|L} 8 2 + 72.732 0.0 0.0 7.3055 7.3055 92.637 0.0 0.0 0.0 31.894330638623583 9.49969008676046 9.49969008676046 9.49969008676046 0 2.079689690656103 1.6989700043360187 1.579689690656103 0.0 {I|L}H{M(Oxidation (M))|F}PK{I|L}E{I|L};{I|L}H{M(Oxidation (M))|F}PK{I|L}{I|L}E;{I|L}H{I|L}MK{I|L}E{I|L};[H{I|L}]{M(Oxidation (M))|F}PK{I|L}E{I|L};{I|L}H{I|L}MK{I|L}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}{I|L}HE{I|L};{I|L}{M(Oxidation (M))|F}HPK{I|L}E{I|L};[KP]{M(Oxidation (M))|F}{I|L}{I|L}HE{I|L};[KP]{I|L}{M(Oxidation (M))|F}{I|L}HE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}{I|L}EH{I|L} 7.3055;6.3513;6.3498;5.6782;5.3956;4.8144;4.6887;4.0248;4.0248;3.924 -;-;-;+;-;-;-;-;-;- + 575 + 1 2.024 73342.9 1.0 5466 3591 9056 DOHH2_400M_050219_1,9059 DOHH2_400M_050219_1,9059,HLFPKLEL True True HLFPKLEL 52.02979 498.79732054472 1432046.0 9056.0 ENSG00000144028|ENST00000323853|SNRNP200 4.172602653503418 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9060 52.039 518.0 332530.0 25 0 33058.0 + + 43238 LSDSFSDLYSSY 12 140 692.301124112616 1382.587695292032 2 692.3016845583916 MULTI CID FTMS 0 0 0 9056 178023.09375 0.3763517026086788 -1 0.10308837890625 4 Unmodified _WCFLSQNKDDQ_ nc|ENSG00000058804|Q9BTX1-2|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1;nc|ENSG00000058804|Q9BTX1-3|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;ENSG00000058804|ENST00000371429|NDC1 26.268140514670165 0.4754186812857754 1 {[TV]|[{I|L}S]}DYADS{I|L} 8 -1 55.763 0.0 0.0 4.0333 0.0 0.0 0.0 515.1779051703209 515.1779051703209 2.6939452842876577 0.0 0.0 0.0 0 0.3252574989159953 1.0457574905606752 2.373984279330327 0.0 {[TV]|[{I|L}S]}DYADS{I|L} 4.0333 - 8306 1 2.024 126514.8 1.0 5467 3591 9056 DOHH2_400M_050219_1,9060 DOHH2_400M_050219_1,9060,WCFLSQNKDDQ False False LSDSFSDLYSSY 52.038923 692.301684558392 6179689.5 9056.0 nc|ENSG00000058804|Q9BTX1-2|NDC1;;nc|ENSG00000058804|Q9BTX1-4|NDC1;;nc|ENSG00000058804|Q9BTX1-3|NDC1;;nc|ENSG00000058804|Q9BTX1-5|NDC1;;ENSG00000058804|ENST00000371429|NDC1 8.614435195922852 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9061 52.042 141.0 460350.0 25 0 52259.0 + 44357 YLRELLTTM 9 86 570.3097212203688 1138.6048895075376 2 570.3101684451103 MULTI CID FTMS 0 0 0 9056 179779.03125 0.5372751994330757 -1 0.10308837890625 5 Unmodified _YLRELLTTM_ ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B 43.77239144664712 0.0547478964384323 1 [Y{I|L}]RE{I|L}{I|L}TTM 9 0 + 62.334 0.0 0.0 5.4746 5.4746 89.092 0.0 0.0 0.0 18.1509399679246 36.92811956283158 18.1509399679246 16.989700043360187 0 0.5 1.5228787452803376 0.8494850021680094 0.0 + + [Y{I|L}]RE{I|L}{I|L}TTM;[Y{I|L}]R[{I|L}T]{I|L}ETM;[Y{I|L}]RE{I|L}{I|L}GE{M(Oxidation (M))|F};[VP][HV]E{I|L}{I|L}TTM;[Y{I|L}]R[{I|L}T]{I|L}TEM;[Y{I|L}]RE{I|L}[VP]{[{M(Oxidation (M))|F}C]|[YS]};[Y{I|L}]RE{I|L}[PS][YV];[VP][HV][{I|L}T]{I|L}ETM;[VP][HV]E{I|L}{I|L}GE{M(Oxidation (M))|F};[Y{I|L}]R[{I|L}T][TP]E{M(Oxidation (M))|F} 5.4746;3.9825;3.1371;3.0377;2.9495;2.208;1.5941;1.5455;0.70015;0.52689 +;-;-;-;-;-;-;-;-;- + 176 1 2.024 54352.3 1.0 5468 3591 9056 DOHH2_400M_050219_1,9061 DOHH2_400M_050219_1,9061,YLRELLTTM True True YLRELLTTM 52.041767 570.31016844511 1686758.625 9056.0 ENSG00000101608|ENST00000217652|MYL12A;;ENSG00000118680|ENST00000237500|MYL12B 6.379148801167806 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9062 52.048 357.0 303180.0 25 0 13871.0 -1 0 94 1002.9758892692 2003.9372256052 2 1002.977465808392 MULTI CID FTMS 0 0 0 9056 176333.109375 0.4500378403930584 -1 0.10308837890625 6 1 [MN]PN{I|L}NEE{[TV]|[{I|L}S]}TGHEN{I|L} 16 -1 69.718 0.0 0.0 3.4791 0.0 0.0 0.0 208.07308374576408 208.07308374576408 19.43488157261392 0.0 0.0 0.0 0 1.6549471895720984 1.5228787452803376 0.0 0.7742275032520141 [MN]PN{I|L}NEE{[TV]|[{I|L}S]}TGHEN{I|L} 3.4791 - 2341 + 1 2.024 76044.2 1.0 5469 3591 9056 DOHH2_400M_050219_1,9062 DOHH2_400M_050219_1,9062, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9063 52.062 800.0 111230.0 25 0 5999.9 -1 0 105 881.4126494107194 1760.810745888239 2 881.9119140505791 MULTI CID FTMS 0 0 0 9056 137948.5 0.0052143863743937 14 -0.7969436645507812 7 1 [KT]EY{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 15 -1 + 97.107 0.0 0.0 5.5149 5.5149 58.52 0.0 0.0 0.0 76.32190971075161 7.337321105952299 7.337321105952299 0.0 0 0.5484550065040282 0.0 0.6747425010840047 1.2302046884880935 [KT]EY{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQN{M(Oxidation (M))|F}C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQN{M(Oxidation (M))|F}VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQA[CS][CG]V{I|L};[KT]EY{M(Oxidation (M))|F}AGGQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]A[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]QA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AGGQQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]A[CS]C(Carbamidomethyl (C))V{I|L} 5.5149;5.5149;5.2487;5.2487;5.002;5.002;5.002;5.002;5.002;5.002 -;-;-;-;-;-;-;-;-;- 6938 + 1 2.024 69980.5 0.6600000262260437 5470 3591 9056 DOHH2_400M_050219_1,9063 DOHH2_400M_050219_1,9063, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9064 52.076 800.0 296720.0 25 0 17637.0 -1 0 122 1148.164344465148 3441.471203995645 3 1148.828051745892 MULTI CID FTMS 0 0 0 9056 122618.875 1.0 0 0.0 8 1 YTPQPG 6 -1 29.436 0.0 0.0 0.85533 0.0 0.0 2311.9249811230447 483.2439386472789 2795.168919770324 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720984 1.1307196863200843 YTPQPG 0.85533 - 2464 + 1 2.024 156574.6 0.6399999856948853 5471 3591 9056 DOHH2_400M_050219_1,9064 DOHH2_400M_050219_1,9064, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9066 52.081 19.0 2199200.0 25 0 149700.0 + 4808 DEQTPIHISW 10 71 613.2957940011767 1224.5770350691532 2 613.2964355349541 MULTI CID FTMS 0 0 0 9065 2634690.25 0.5447760329914626 2 -0.2369117736816406 1 Unmodified _DEQTPIHISW_ ENSG00000100526|ENST00000335183|CDKN3 47.594388314883695 0.0942698883389255 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QTP{I|L}H{I|L}SW 10 0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q + + 36.63 11.184 3.0055 2.9913 2.9913 50.449 0.0 0.0 0.0 0.0 2.1325157645424326 0.0 0.0 0 1.0924778212679485 0.0 0.0 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QTP{I|L}H{I|L}SW 2.9913 + + 227 + 1 2.024 37697.3 1.0 5472 3592 9065 DOHH2_400M_050219_1,9066 DOHH2_400M_050219_1,9066,DEQTPIHISW True True DEQTPIHISW 52.080754 613.296435534954 69149472.0 9065.0 ENSG00000100526|ENST00000335183|CDKN3 8.994729359944662 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9067 52.082 22.0 2181000.0 25 0 274590.0 + 1221 AIHTAILTL 9 66 476.79493735128347 951.575321769367 2 476.7952148318291 MULTI CID FTMS 0 0 0 9065 2403704.0 0.5448450326805608 2 -0.2369117736816406 2 Unmodified _AIHTAILTL_ ENSG00000106588|ENST00000223321|PSMA2 60.38955033654506 0.025866396858536 1 [{I|L}T][HA]A{I|L}{I|L}T{I|L} 9 2 + 60.084 0.0 0.0 6.3142 6.3142 86.567 0.0 0.0 0.0 9.946049681132934 29.50827206916173 9.946049681132934 7.257724967479859 0 0.8182503180159344 1.5228787452803376 1.6549471895720984 0.0 [{I|L}T][HA]A{I|L}{I|L}T{I|L};[{I|L}T][HA]{I|L}A{I|L}T{I|L};[{I|L}T]{I|L}[HA]A{I|L}T{I|L};[HT][{I|L}A]A{I|L}{I|L}T{I|L};[HT][{I|L}A]{I|L}A{I|L}T{I|L};[H{I|L}]{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L};[{I|L}T][HA]{I|L}[{I|L}T]A{I|L};[{I|L}T]{I|L}[HA][{I|L}T]A{I|L};[HT][{I|L}A]{I|L}[{I|L}T]A{I|L} 6.3142;5.5515;4.7888;4.3974;3.6347;3.1631;2.8418;2.0791;0.92506 -;-;-;-;-;-;-;-;- 183 1 2.024 41455.8 1.0 5473 3592 9065 DOHH2_400M_050219_1,9067 DOHH2_400M_050219_1,9067,AIHTAILTL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9068 52.083 41.0 1605600.0 25 0 189300.0 + 34213 SLPHNIIEL 9 82 518.2957682395925 1034.5769835459848 2 518.2958862185478 MULTI CID FTMS 0 0 0 9065 1299282.0 1.0 0 0.0 3 Unmodified _SLPHNIIEL_ ENSG00000253729|ENST00000314191|PRKDC;ENST00000541488.1_1_8:48839745-48841720:-|nuORF;nc|ENSG00000253729|P78527-2|PRKDC 62.57269311338072 0.0246576765497938 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{I|L}S{I|L}{I|L}E{I|L} 9 4 + 50.939 0.0 0.0 4.9236 4.9236 73.48 0.0 0.0 0.0 1.4215905896025305 1.4215905896025305 1.4215905896025305 0.2422750325201406 0 0.6237125054200234 0.0 1.0114393726401687 0.3494850021680094 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{I|L}S{I|L}{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{I|L}{I|L}S{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}S{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}S{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{I|L}S{I|L}E{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GG{I|L}S{I|L}{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{I|L}{I|L}SE{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GG{I|L}{I|L}S{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}[C(Carbamidomethyl (C))K]E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}S[WK]E{I|L} 4.9236;4.9002;4.7862;4.7628;3.7044;3.6958;3.6809;3.6724;3.596;3.5725 -;-;-;-;-;-;-;-;-;- 347 1 2.024 56872.0 1.0 5474 3592 9065 DOHH2_400M_050219_1,9068 DOHH2_400M_050219_1,9068,SLPHNIIEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9069 52.085 63.0 743340.0 25 0 69898.0 45559 YVDPQFLTY 9 75 573.2791170313125 1144.5436811294248 2 573.2795287966728 MULTI CID FTMS 0 0 0 9065 736505.4375 0.3336900615351192 -1 0.0708656311035156 4 Unmodified _YVDPQFLTY_ ENSG00000181191|ENST00000374571|PJA1;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;nc|ENSG00000181191|Q8NG27|PJA1;nc|ENSG00000198961|O43164-2|PJA2 25.399314129420983 0.2080152500878129 1 [QP]{M(Oxidation (M))|F}{I|L}D 5 5 25.942 0.0 0.0 2.2666 0.0 0.0 0.0 541.2292029402248 541.2292029402248 4.488474775526186 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 [QP]{M(Oxidation (M))|F}{I|L}D 2.2666 - 151 1 2.024 42344.0 1.0 5475 3592 9065 DOHH2_400M_050219_1,9069 DOHH2_400M_050219_1,9069,YVDPQFLTY False True PQNFLVYTY 52.084675 573.279528796673 0.0 9065.0 nc|ENSG00000168619|Q9Y3Q7-3|ADAM18;;ENSG00000168619|ENST00000265707|ADAM18;;nc|ENSG00000168619|Q9Y3Q7-2|ADAM18 0.52900097767512 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9070 52.086 70.0 744690.0 25 0 35942.0 + 15984 ITDLPDHLLSY 11 67 643.8349383560701 1285.65532377894 2 643.8351928591728 MULTI CID FTMS 0 0 0 9065 646775.0 0.5421089990911068 1 -0.1443367004394531 5 Unmodified _ITDLPDHLLSY_ ENSG00000219545|ENST00000682710|UMAD1;ENST00000406829.2_2_7:7812042-7917166:+|nuORF 79.59630418116434 0.0079568537026334 1 [{I|L}T]D[{M(Oxidation (M))|F}T]{I|L}T{I|L}{I|L}SY 11 4 + 73.79 0.0 0.0 5.7395 5.7395 84.368 0.0 0.0 0.0 9.232038299912702 35.13946975462464 9.232038299912702 7.046284272644044 0 1.8182503180159344 2.0 1.066901560044258 0.0 [{I|L}T]D[{M(Oxidation (M))|F}T]{I|L}T{I|L}{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]{I|L}DT{I|L}{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]{I|L}SE{I|L}{I|L}SY;[{I|L}T]D[{M(Oxidation (M))|F}T]{I|L}{I|L}T{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]D{I|L}T{I|L}{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]S{I|L}E{I|L}{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]{I|L}D{I|L}T{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]{I|L}{I|L}DT{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]D{I|L}{I|L}T{I|L}SY;[{I|L}T]{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T]E{I|L}{I|L}SY 5.7395;5.1914;5.1914;5.0722;4.8203;4.6477;4.5242;4.427;4.153;3.8301 -;-;-;-;-;-;-;-;-;- 878 1 2.024 48825.7 1.0 5476 3592 9065 DOHH2_400M_050219_1,9070 DOHH2_400M_050219_1,9070,ITDLPDHLLSY True True ITDLPDHLLSY 52.086337 643.835192859173 26073930.0 9065.0 ENSG00000219545|ENST00000682710|UMAD1;;ENST00000406829.2_2_7:7812042-7917166:+|nuORF 8.517318566640219 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9071 52.089 101.0 763150.0 25 0 69720.0 + 6906 EEFELLGKAY 10 89 599.8033587705081 1197.592164607816 2 599.8033325076103 MULTI CID FTMS 0 0 0 9065 511139.375 0.4496423030583064 -1 0.0708656311035156 6 Unmodified _EEFELLGKAY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 69.10491478415734 0.0189654488676922 1 EE{M(Oxidation (M))|F}E{I|L}{I|L}GKAY 10 0 + 74.237 0.0 0.0 6.1988 6.1988 86.938 0.0 0.0 0.0 44.84612060564024 15.026975159433531 15.026975159433531 8.470325397914564 0 0.7134679910804405 1.3010299956639813 0.3494850021680094 0.3252574989159953 + + EE{M(Oxidation (M))|F}E{I|L}{I|L}GKAY;EE{M(Oxidation (M))|F}E{I|L}{I|L}[KQ]Y;[DP][KP]{I|L}{I|L}E{M(Oxidation (M))|F}[HC];EE{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KKEE 6.1988;5.4915;3.5275;1.5309 +;-;-;- + 497 + 1 2.024 59317.3 1.0 5477 3592 9065 DOHH2_400M_050219_1,9071 DOHH2_400M_050219_1,9071,EEFELLGKAY True True EEFELLGKAY 52.088518 599.80333250761 13590754.0 9065.0 nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 7.653025468190511 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9072 52.094 280.0 335600.0 25 0 23420.0 -1 0 78 914.4358935961618 1826.8572342591235 2 914.9282104372978 MULTI CID FTMS 0 0 0 -1 0 7 1 [KT]QY{M(Oxidation (M))|F}ADQQA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 15 -1 + 88.382 0.0 0.0 4.8379 4.8379 56.057 0.0 0.0 0.0 58.96536110254618 11.91885526238913 11.91885526238913 0.0 0 0.0 0.0 0.7742275032520141 0.3807196863200844 [KT]QY{M(Oxidation (M))|F}ADQQA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQAE[EP]C(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQAED[DG]V{I|L};[KT]KY{M(Oxidation (M))|F}ADQQA[HA]{M(Oxidation (M))|F}[CG]{I|L};[KT]KY{M(Oxidation (M))|F}ADQ[AG]A[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ADQ[AG]A[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}AD[AG]QA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}AD[AG]QA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ADQQA[HA]{M(Oxidation (M))|F}[CG]{I|L} 4.8379;4.8379;4.6732;4.6578;4.3436;4.3436;4.3436;4.3436;4.3436;4.3436 -;-;-;-;-;-;-;-;-;- 2573 + 1 2.024 66378.7 1.0 5478 3592 9065 DOHH2_400M_050219_1,9072 DOHH2_400M_050219_1,9072, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9073 52.108 800.0 267370.0 25 0 15870.0 + 33051 SEQDWSAIQNF 11 174 662.7936183776593 1323.5726838221185 2 662.7935668826103 MULTI CID FTMS 0 0 0 9065 221785.0625 0.5677637644146478 -1 0.0708656311035156 8 Unmodified _SEQDWSAIQNF_ ENSG00000103365|ENST00000309859|GGA2;ENST00000566651.1_1_16:23505576-23507079:-|nuORF 59.49591170135616 0.071190994960647 1 [AG]DTDWSA{I|L} 9 7 62.205 0.0 0.0 4.6998 0.0 0.0 0.0 404.1564429083839 404.1564429083839 15.402948151739622 0.0 0.0 0.0 0 1.0010912013506126 1.6989700043360187 1.916386562212268 0.0 [AG]DTDWSA{I|L} 4.6998 - 3461 1 2.024 161836.4 0.7900000214576721 5479 3592 9065 DOHH2_400M_050219_1,9073 DOHH2_400M_050219_1,9073,SEQDWSAIQNF True True SEQDWSAIQNF 52.107537 662.79356688261 2469879.75 9065.0 ENST00000566651.1_1_16:23505576-23507079:-|nuORF;;ENSG00000103365|ENST00000309859|GGA2 8.274194399515787 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9074 52.116 505.0 284450.0 25 0 56897.0 + 44 AAASHFFNL 9 130 489.2452530667697 976.4759532003394 2 489.2455322146416 MULTI CID FTMS 0 0 0 9065 196396.78125 0.5373449212770974 -1 0.0708656311035156 9 Unmodified _AAASHFFNL_ ENSG00000122550|ENST00000339077|KLHL7;nc|ENSG00000122550|Q8IXQ5-2|KLHL7;nc|ENSG00000122550|Q8IXQ5-3|KLHL7;nc|ENSG00000122550|Q8IXQ5-4|KLHL7;nc|ENSG00000122550|Q8IXQ5-5|KLHL7 74.42276476219924 0.019389277360085 1 {[{M(Oxidation (M))|F}H]|[RQ]}SAAA{M(Oxidation (M))|F}N{I|L} 9 6 + 56.156 0.0 0.0 5.7509 5.7509 81.206 0.0 0.0 0.0 7.582885525340792 14.973024840566469 7.582885525340792 3.711375162600703 0 0.7742275032520141 0.958607314841775 0.5796896906561032 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}SAAA{M(Oxidation (M))|F}N{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}SA{M(Oxidation (M))|F}AAN{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}SA{M(Oxidation (M))|F}NAA{I|L};[HS]A{M(Oxidation (M))|F}AA{M(Oxidation (M))|F}N{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}SAAA{M(Oxidation (M))|F}GG{I|L};AA[HS]{M(Oxidation (M))|F}A{M(Oxidation (M))|F}N{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}SAA{M(Oxidation (M))|F}AN{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}S{[NV]|[RG]}{M(Oxidation (M))|F}N{I|L};[HS]AA{M(Oxidation (M))|F}A{M(Oxidation (M))|F}N{I|L};[HS]{M(Oxidation (M))|F}AAA{M(Oxidation (M))|F}N{I|L} 5.7509;5.3708;4.99;4.9743;4.8079;4.7692;4.7542;4.7086;4.666;4.6412 -;-;-;-;-;-;-;-;-;- 2715 1 2.024 112709.1 1.0 5480 3592 9065 DOHH2_400M_050219_1,9074 DOHH2_400M_050219_1,9074,AAASHFFNL True True AAASHFFNL 52.116439 489.245532214642 2084600.0 9065.0 nc|ENSG00000122550|Q8IXQ5-5|KLHL7;;nc|ENSG00000122550|Q8IXQ5-2|KLHL7;;nc|ENSG00000122550|Q8IXQ5-4|KLHL7;;ENSG00000122550|ENST00000339077|KLHL7;;nc|ENSG00000122550|Q8IXQ5-3|KLHL7 5.789501825968425 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9075 52.13 800.0 125230.0 25 0 8300.0 + 33811 DNNRSLDLDSIIA 13 89 723.3648196240673 1444.7150863149343 2 723.3651611208916 MULTI CID FTMS 0 0 0 9065 140629.546875 1.0 0 0.0 10 Unmodified _SLDPRFRQYTY_ ENSG00000167768|ENST00000252244|KRT1;P04264;Q8BGZ7;ENSG00000186442|ENST00000417996|KRT3;Q5XQN5;P50446;P12035;Q922U2 9.38312468134398 0.8308777417566128 1 {NN|[MP]|[D{I|L}]|[EV]}S{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]DS{I|L}[{I|L}A] 13 10 + 49.441 0.0 0.0 3.4222 3.4222 72.377 0.0 0.0 0.0 1.0202674047851232 10.83555367274105 1.0202674047851232 3.0102999566398125 0 0.5 1.5228787452803376 1.5669015600442575 0.0 {NN|[MP]|[D{I|L}]|[EV]}S{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]DS{I|L}[{I|L}A];{[TV]|[{I|L}S]}D{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]DS{I|L}[{I|L}A];{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[YK]NDS{I|L}[{I|L}A];[DN][RN]{[TV]|[{I|L}S]}D{I|L}DS{I|L}[{I|L}A];{[DS]|[MA]|[CV]|TT}[RP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{I|L}DS{I|L}[{I|L}A];{[DS]|[MA]|[CV]|TT}{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]DS{I|L}[{I|L}A];{[DS]|[MA]|[CV]|TT}[RP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NNDS{I|L}[{I|L}A];[DN][RH][YK]NDS{I|L}[{I|L}A];[DN][RN][WK]NDS{I|L}[{I|L}A] 3.4222;3.2138;2.9775;2.5628;2.3477;2.1914;1.931;1.6863;1.6863 -;-;-;-;-;-;-;-;- 327 1 2.024 80715.6 0.6200000047683716 5481 3592 9065 DOHH2_400M_050219_1,9075 DOHH2_400M_050219_1,9075,SLDPRFRQYTY False False DNNRSLDLDSIIA 52.13027 723.365161120892 909886.25 9065.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;Q8BGZ7;;ENSG00000186442|ENST00000417996|KRT3;;Q5XQN5;;P50446;;P12035;;Q922U2 6.104701519012451 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9076 52.141 592.0 149100.0 25 0 7135.5 -1 0 95 796.7048679667728 2387.0927745005183 3 797.0393554568291 MULTI CID FTMS 0 0 0 9065 99657.8359375 0.6934326730316931 -1 0.0708656311035156 11 1 [YK]YPPPP 7 -1 45.802 0.0 0.0 1.9187 0.0 0.0 0.0 1541.6420029949095 1541.6420029949095 13.106673061697371 0.0 0.0 0.0 0 0.5 0.958607314841775 0.0 0.9489700043360187 [YK]YPPPP 1.9187 - 2189 1 2.024 68321.5 1.0 5482 3592 9065 DOHH2_400M_050219_1,9076 DOHH2_400M_050219_1,9076, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9077 52.154 800.0 105350.0 25 0 9716.7 + 39631 VDSLYVIYVY 10 113 617.3213627496233 1232.6281725660465 2 617.8235351443291 MULTI CID FTMS 0 0 0 9065 81810.2265625 0.0177304398826296 5 -0.5001296997070312 12 Unmodified _VDSLYVIYVY_ REV__ENST00000356577.8_2_21:34948883-34949093:+|nuORF 21.74664581756881 0.480091245866545 1 [VS]D{I|L}VYY{I|L}VY 10 -1 [VS]D{I|L}VYY{I|L} + + 19.464 17.782 1.8669 1.5791 1.5791 48.588 0.0 0.0 0.0 0.0 -2.0932483072280874 -2.0932483072280874 0.0 0 0.0 0.0 0.0 0.0 [VS]D{I|L}VYY{I|L}VY 1.5791 - 969 + 1 2.024 63861.9 0.4900000095367431 5483 3592 9065 DOHH2_400M_050219_1,9077 DOHH2_400M_050219_1,9077,VDSLYVIYVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9078 52.17 800.0 89538.0 25 0 2351.4 -1 0 102 1076.5291684286556 3226.565675886167 3 1076.864184558392 MULTI CID FTMS 0 0 0 9065 156455.734375 1.0 0 0.0 13 1 NVM{[QV]|[N{I|L}]|[RA]|[KV]} 5 -1 29.521 0.0 0.0 0.91492 0.0 0.0 2637.2638366251463 0.0 2637.2638366251463 0.0 17.201140738196017 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 NVM{[QV]|[N{I|L}]|[RA]|[KV]} 0.91492 - 134 1 2.024 50997.4 0.6000000238418579 5484 3592 9065 DOHH2_400M_050219_1,9078 DOHH2_400M_050219_1,9078, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9079 52.178 455.0 322900.0 25 0 30046.0 + -1 NIDYPVLY 8 93 996.5050075726472 0 996.5058471560478 PEAK CID FTMS 0 0 0 9065 154209.4375 1.0 0 0.0 14 ENSG00000105229|ENST00000262971|PIAS4;ENST00000593518.1_1_19:4007758-4017708:+|nuORF;ENST00000599999.5_1_19:4007758-4028181:+|nuORF 1 NVPYD 5 -1 29.17 0.0 0.0 1.4651 0.0 0.0 1175.6118695380692 224.1044100397094 1399.7162795777786 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.3252574989159953 NVPYD 1.4651 - 2313 + 1 2.024 100339.3 1.0 5485 3592 9065 DOHH2_400M_050219_1,9079 DOHH2_400M_050219_1,9079, False False NIDYPVLY 52.177903 996.505847156048 1554049.625 9065.0 ENSG00000105229|ENST00000262971|PIAS4;;ENST00000593518.1_1_19:4007758-4017708:+|nuORF;;ENST00000599999.5_1_19:4007758-4028181:+|nuORF 4.838901440302531 1.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9080 52.188 572.0 135100.0 25 0 6384.4 -1 0 98 966.9639424445278 1931.913331955856 2 966.970751941204 MULTI CID FTMS 0 0 0 9065 149056.734375 0.0736693821911511 -13 1.6190834045410156 15 1 [NP]{I|L}NMW[PG]GPNYKS{I|L}[MN] 17 -1 + 72.813 0.0 0.0 3.769 3.769 70.565 0.0 0.0 0.0 5.449182685728616 49.75374062332227 5.449182685728616 1.0277859858438063 0 0.3494850021680094 0.958607314841775 0.5 0.3494850021680094 [NP]{I|L}NMW[PG]GPNYKS{I|L}[MN];[NP]{I|L}NADT[PS]GPNYKS{I|L}[MN];[NP]{I|L}NAD{[RE]|[WV]}GPNYKS{I|L}[MN];[NP]VQMW[PG]GPNYKS{I|L}[MN];[NP]{I|L}NMW[PG]N[PG]YKS{I|L}[MN];[NP]{I|L}NMW[PG]GG[PG]YKS{I|L}[MN];[NP]VQADT[PS]GPNYKS{I|L}[MN];[NP]{I|L}NADT[PS]N[PG]YKS{I|L}[MN];[MN]PN{I|L}W[PG]GPNYKS{I|L}[MN];[NP]{I|L}NADT[PS]GG[PG]YKS{I|L}[MN] 3.769;3.7158;3.6138;3.4573;3.4447;3.4319;3.4041;3.3915;3.3833;3.3794 -;-;-;-;-;-;-;-;-;- 13375 1 2.024 59482.7 1.0 5486 3592 9065 DOHH2_400M_050219_1,9080 DOHH2_400M_050219_1,9080, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9081 52.193 177.0 388760.0 25 0 44854.0 + -1 TDSQCLTVLM 10 94 584.2717040219671 1166.5288551107342 2 584.2731811404228 MULTI CID FTMS 0 0 0 9065 119579.2265625 0.4345180317928231 -1 0.0708656311035156 16 Carbamidomethyl (C) _TDSQC(Carbamidomethyl (C))LTVLM_ REV__ENSG00000111913|ENST00000643898|RIPOR2;REV__nc|ENSG00000111913|Q9Y4F9|RIPOR2 26.268140514670165 0.3785003716575977 1 YVDY 4 -1 48.22 0.0 0.0 4.1336 0.0 0.0 0.0 623.2809542291624 623.2809542291624 17.0173490661703 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 YVDY 4.1336 - 109 + 1 2.024 54903.1 1.0 5487 3592 9065 DOHH2_400M_050219_1,9081 DOHH2_400M_050219_1,9081,TDSQCLTVLM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9082 52.206 800.0 73430.0 25 0 4714.7 + 34524 SNTYVMVVM 9 80 1043.4915453446338 1042.4842688780338 1 1043.494067370892 MULTI CID FTMS 0 0 0 9065 106397.515625 1.0 0 0.0 17 Unmodified _SNTYVMVVM_ ENSG00000083750|ENST00000374941|RRAGB;ENSG00000155876|ENST00000380527|RRAGA;nc|ENSG00000083750|Q5VZM2|RRAGB 88.95385435242217 0.0153473310052057 1 {[QS]|[NT]}SYVMVVM 9 2 + 87.59 0.0 0.0 8.4021 8.4021 94.993 0.0 0.0 0.0 12.08674701179433 14.09256854528806 12.08674701179433 12.08674701179433 0 0.3807196863200844 0.0 2.5356668758921828 1.7614393726401687 {[QS]|[NT]}SYVMVVM;[YT]VNSMVVM;{[QS]|[NT]}SYVVMVM;[YT][NS]VMVVM;[YN]{[MG]|[TS]}VMVVM;[{M(Oxidation (M))|F}T][QT]SMVVM;[YT]VNSVMVM;{[QS]|[NT]}[YV]SMVVM;[{M(Oxidation (M))|F}T][C(Carbamidomethyl (C))R]MVVM;[YN]{[TV]|[{I|L}S]}SMVVM 8.4021;7.2427;7.0818;6.3581;6.2939;5.9983;5.9224;5.8785;5.8346;5.6453 -;-;-;-;-;-;-;-;-;- 1824 1 2.024 43315.7 0.4699999988079071 5488 3592 9065 DOHH2_400M_050219_1,9082 DOHH2_400M_050219_1,9082,SNTYVMVVM True True SNTYVMVVM 52.206459 1043.49406737089 591639.75 9065.0 ENSG00000155876|ENST00000380527|RRAGA;;ENSG00000083750|ENST00000374941|RRAGB;;nc|ENSG00000083750|Q5VZM2|RRAGB 7.492624918619792 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9083 52.22 800.0 79628.0 25 0 8209.8 20955 LNKAYRKRE 9 96 589.343123859868 0 589.3436157107353 PEAK CID FTMS 0 0 0 9065 96938.125 1.0 0 0.0 18 Unmodified _LNKAYRKRE_ ENSG00000174948|ENST00000389740|GPR149 2.059750862983233 0.3444685223463734 1 {M(Oxidation (M))|F} 1 9 2.4743 0.0 0.0 0.21028 0.0 0.0 853.4922341925891 173.0823153131469 1026.574549505736 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.21028 - 5 + 1 2.024 54828.0 0.4699999988079071 5489 3592 9065 DOHH2_400M_050219_1,9083 DOHH2_400M_050219_1,9083,LNKAYRKRE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9085 52.227 163.0 238820.0 25 0 32195.0 + 5415 DLLIAVKSV 9 60 479.3023967506642 956.5902405681284 2 479.3025695681572 MULTI CID FTMS 0 0 0 9084 173426.515625 0.1222051562127443 2 -0.267822265625 1 Unmodified _DLLIAVKSV_ ENSG00000237172|ENST00000449549|B3GNT9 21.53697664764585 0.2571576504437394 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L} 4 5 43.94 0.0 0.0 4.5934 0.0 0.0 0.0 499.28770476769984 499.28770476769984 31.46591250700361 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L} 4.5934 + + 48 + 1 2.024 38624.8 1.0 5490 3593 9084 DOHH2_400M_050219_1,9085 DOHH2_400M_050219_1,9085,DLLIAVKSV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9086 52.236 512.0 146550.0 25 0 8877.2 + 4732 DEEQVFHFY 9 105 607.2618207998911 1212.509088666582 2 607.2620117068291 MULTI CID FTMS 0 0 0 9084 101029.3359375 0.1706066349665476 1 -0.0925750732421875 2 Unmodified _DEEQVFHFY_ ENSG00000101868|ENST00000379068|POLA1;nc|ENSG00000101868|P09884|POLA1 68.08070601005525 0.0218408846571049 1 {[{M(Oxidation (M))|F}H]|[RQ]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AQEM 9 8 62.009 0.0 0.0 5.1141 0.0 0.0 0.0 109.9768370398821 109.9768370398821 35.31263913558254 0.0 0.0 0.0 0 1.1549471895720984 1.3979400086720375 0.5994850021680094 0.7887254899964358 {[{M(Oxidation (M))|F}H]|[RQ]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AQEM 5.1141 - 579 1 2.024 59800.5 1.0 5491 3593 9084 DOHH2_400M_050219_1,9086 DOHH2_400M_050219_1,9086,DEEQVFHFY True True DEEQVFHFY 52.236407 607.262011706829 6705696.5 9084.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1 9.320672353108725 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9087 52.238 54.0 1200800.0 25 0 182600.0 + 32689 SDWVRDVAW 9 65 567.2720129020416 1132.5294728708832 2 567.2727538943291 MULTI CID FTMS 0 0 0 9084 1042936.6875 1.0 0 0.0 3 Unmodified _SDWVRDVAW_ ENSG00000157020|ENST00000350697|SEC13;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 40.23920728925047 0.0741434193262949 1 VCVAW 5 5 38.711 0.0 0.0 3.4181 0.0 0.0 556.2765980451187 0.0 556.2765980451187 0.0 16.716590673155736 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 VCVAW 3.4181 - 92 1 2.024 52637.4 1.0 5492 3593 9084 DOHH2_400M_050219_1,9087 DOHH2_400M_050219_1,9087,SDWVRDVAW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9088 52.239 51.0 1506600.0 25 0 200600.0 + 40641 VLDPYLLKY 9 81 562.3234621488801 1122.6323713645602 2 562.3238403201103 MULTI CID FTMS 0 0 0 9084 963936.625 0.369570332823032 -1 0.1443367004394531 4 Unmodified _VLDPYLLKY_ ENSG00000239789|ENST00000285298|MRPS17 45.69961567697781 0.0497987121815769 1 V{I|L}DPY{I|L}{I|L}KY 9 0 + 88.382 0.0 0.0 7.8728 7.8728 97.883 0.0 0.0 0.0 46.15865011156764 12.98332479720628 12.98332479720628 71.26918465971855 0 1.1549471895720984 2.0 0.0 0.0 + + V{I|L}DPY{I|L}{I|L}KY;V[HQ][SG]K{I|L}{I|L}{[QN]|[E{I|L}]|[KN]} 7.8728;1.5244 +;- + 274 + 1 2.024 65910.3 1.0 5493 3593 9084 DOHH2_400M_050219_1,9088 DOHH2_400M_050219_1,9088,VLDPYLLKY True True VLDPYLLKY 52.239153 562.32384032011 36025924.0 9084.0 ENSG00000239789|ENST00000285298|MRPS17 8.105546633402506 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9089 52.241 72.0 1109800.0 25 0 135100.0 + 40983 VMAPRTLLL 9 67 507.312404799569 1012.610256665938 2 507.3126708865166 MULTI CID FTMS 0 0 0 9084 757965.25 0.3376263136097593 -1 0.1443367004394531 5 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 40.23920728925047 0.0741434193262949 1 VMAP 4 5 58.175 0.0 0.0 5.7451 0.0 0.0 0.0 611.3881319635374 611.3881319635374 23.667053245199625 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMAP 5.7451 + + 92 + 1 2.024 65027.9 1.0 5494 3593 9084 DOHH2_400M_050219_1,9089 DOHH2_400M_050219_1,9089,VMAPRTLLL True True VMAPRTLLL 52.240832 507.312670886517 31633878.0 9084.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 3.0601240396499634 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9090 52.243 107.0 715170.0 25 0 57667.0 + 7832 RRFMQTFVL 9 78 399.89001889592697 1196.648227287981 3 399.8901855349541 MULTI CID FTMS 0 0 0 9084 430976.96875 0.7460241204997201 -1 0.1443367004394531 6 Unmodified _ELKQGYTFVI_ ENSG00000145907|ENST00000356245|G3BP1;nc|ENSG00000145907|Q13283-2|G3BP1;ENST00000519832.1_1_5:151166169-151170647:+|nuORF 16.565877749689598 0.5695826726197942 1 EDV{I|L} 4 7 19.029 0.0 0.0 1.5902 0.0 0.0 722.4088912057529 0.0 722.4088912057529 0.0 9.564856298445576 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 EDV{I|L} 1.5902 - 26 + 1 2.024 63578.9 1.0 5495 3593 9084 DOHH2_400M_050219_1,9090 DOHH2_400M_050219_1,9090,ELKQGYTFVI False True RRFMQTFVL 52.243094 399.890185534954 3934998.75 9084.0 ENSG00000145907|ENST00000356245|G3BP1;;nc|ENSG00000145907|Q13283-2|G3BP1;;ENST00000519832.1_1_5:151166169-151170647:+|nuORF 6.307499408721924 3.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9091 52.246 128.0 680900.0 25 0 33288.0 + 10530 FVDPLVTNY 9 99 534.2739324521665 1066.533311971133 2 534.2736694216728 MULTI CID FTMS 0 0 0 9084 395102.0625 0.480071108111273 -1 0.1443367004394531 7 Unmodified _FVDPLVTNY_ ENSG00000043514|ENST00000316891|TRIT1;ENST00000462243.2_1_1:40318401-40323020:-|nuORF;ENST00000486825.6_1_1:40315918-40341739:-|nuORF;nc|ENSG00000043514|Q9H3H1-4|TRIT1 46.020951573049366 0.0490941689151868 1 [{I|L}P]DV{M(Oxidation (M))|F}V 6 7 37.44 0.0 0.0 3.5104 0.0 0.0 0.0 393.13913770404014 393.13913770404014 17.117129053615088 0.0 0.0 0.0 0 0.3494850021680094 1.154901959985743 0.0 0.0 [{I|L}P]DV{M(Oxidation (M))|F}V 3.5104 - 305 1 2.024 72511.9 1.0 5496 3593 9084 DOHH2_400M_050219_1,9091 DOHH2_400M_050219_1,9091,FVDPLVTNY True True FVDPLVTNY 52.245724 534.273669421673 15801602.0 9084.0 nc|ENSG00000043514|Q9H3H1-4|TRIT1;;ENSG00000043514|ENST00000316891|TRIT1;;ENST00000486825.6_1_1:40315918-40341739:-|nuORF;;ENST00000462243.2_1_1:40318401-40323020:-|nuORF 7.922313690185547 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9092 52.254 449.0 288070.0 25 0 22212.0 + 10337 FSEPSFITESY 11 130 653.7959342544534 0 653.7963134646416 PEAK CID FTMS 0 0 0 9084 205576.859375 0.6147696550409366 -1 0.1443367004394531 8 Unmodified _FSEPSFITESY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 71.92227651296345 0.0014531822402273 1 T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}NS 6 9 28.722 0.0 0.0 2.1999 0.0 0.0 415.1639955320491 178.05137048892814 593.2153660209773 0.0 0.0 0.0 0.0 0 0.0 0.0 1.385151878060192 0.0 T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}NS 2.1999 - 1734 + 1 2.024 98138.4 1.0 5497 3593 9084 DOHH2_400M_050219_1,9092 DOHH2_400M_050219_1,9092,FSEPSFITESY True True FSEPSFITESY 52.253709 653.796313464642 2447471.5 9084.0 ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;nc|ENSG00000134954|P14921-2|ETS1;;nc|ENSG00000134954|P14921-5|ETS1 5.9559752146403 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9093 52.261 390.0 161210.0 25 0 15195.0 + 45455 YTELLAQVY 9 100 550.2869169482915 1098.559280963383 2 550.2874633669853 MULTI CID FTMS 0 0 0 9084 156738.421875 0.8758591816153776 -1 0.1443367004394531 9 Unmodified _YTELLAQVY_ ENSG00000108384|ENST00000337432|RAD51C;ENST00000475762.5_1_17:56772326-56801433:+|nuORF;ENST00000487525.5_1_17:56772519-56783250:+|nuORF;ENST00000487921.5_1_17:56769962-56783250:+|nuORF 64.23631603340823 0.0237365939569086 1 [YT]E{I|L}{I|L}AQVY 9 0 + 72.207 0.0 0.0 6.5728 6.5728 87.918 0.0 0.0 0.0 17.471799572732465 48.460696996448576 17.471799572732465 8.494850021680094 0 0.8935078169319297 1.5228787452803376 1.5189301784845295 0.0 + + [YT]E{I|L}{I|L}AQVY;[YT]E{I|L}A{I|L}QVY;[YT]E{I|L}{I|L}A[AG]VY;[YT]E{I|L}AQ{I|L}VY;[YT]E{I|L}A{I|L}[AG]VY;{[ET]|[MV]}Y{I|L}{I|L}AQVY;{[QN]|[E{I|L}]|[KN]}T{I|L}YAQVY;{[ET]|[MV]}{I|L}{I|L}YAQVY;{[QN]|[E{I|L}]|[KN]}TY{I|L}AQVY;{[ET]|[MV]}{I|L}Y{I|L}AQVY 6.5728;5.7996;5.7346;4.9786;4.9614;4.8088;4.7607;4.7339;4.4646;4.4378 +;-;-;-;-;-;-;-;-;- + 773 1 2.024 55648.1 1.0 5498 3593 9084 DOHH2_400M_050219_1,9093 DOHH2_400M_050219_1,9093,YTELLAQVY True True YTELLAQVY 52.260711 550.287463366985 1437980.5 9084.0 ENST00000487921.5_1_17:56769962-56783250:+|nuORF;;ENST00000487525.5_1_17:56772519-56783250:+|nuORF;;ENSG00000108384|ENST00000337432|RAD51C;;ENST00000475762.5_1_17:56772326-56801433:+|nuORF 6.306599934895833 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9094 52.27 521.0 165140.0 25 0 12363.0 + 6433 EADRNLRYVY 10 97 649.82515174375 1297.6357505543 2 649.8268310427666 MULTI CID FTMS 0 0 0 9084 142402.71875 1.0 0 0.0 10 Unmodified _EADRNLRYVY_ REV__ENSG00000071894|ENST00000616140|CPSF1 18.1463463914782 0.5430639438673815 1 {[CP]|[EA]}DAST{I|L}{I|L}VGHW 12 -1 + 58.044 0.0 0.0 4.4731 4.4731 75.235 0.0 0.0 0.0 5.942124970647029 2.894481231141661 2.894481231141661 2.894481231141661 0 0.75 0.0 0.7059771852360797 0.0 {[CP]|[EA]}DAST{I|L}{I|L}VGHW;{[CP]|[EA]}DAST{I|L}{I|L}VGWH;{[CP]|[EA]}WST{I|L}{I|L}VGHW;{[CP]|[EA]}WST{I|L}{I|L}VGWH;{[CP]|[EA]}DAST{I|L}{I|L}RHW;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDS{I|L}VGHW;{[CP]|[EA]}REDS{I|L}RHW;{[CP]|[EA]}DAST{I|L}{I|L}V[EP][PG];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDTVVGHW;{[CP]|[EA]}DAST{I|L}{I|L}RWH 4.4731;4.25;4.1955;3.9725;3.9636;3.9031;3.7851;3.7764;3.7674;3.7405 -;-;-;-;-;-;-;-;-;- 1527 + 1 2.024 69329.9 1.0 5499 3593 9084 DOHH2_400M_050219_1,9094 DOHH2_400M_050219_1,9094,EADRNLRYVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9095 52.284 800.0 159610.0 25 0 22304.0 + 37448 TLDPQTGLFY 10 154 577.7894938449703 1153.5644347567404 2 577.7906982302666 MULTI CID FTMS 0 0 0 9084 110724.71875 0.909352713333477 -1 0.1443367004394531 11 Unmodified _TLDPQTGLFY_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 51.76506608216692 0.0697913821149828 1 [QP]TG{I|L}DT{I|L}{M(Oxidation (M))|F}Y 10 6 + 93.169 0.0 0.0 8.0766 8.0766 89.845 0.0 0.0 0.0 13.255221433953352 16.53212513775344 13.255221433953352 6.86665498668475 0 1.0 0.9208187539523752 1.7585820071949734 0.0 [QP]TG{I|L}DT{I|L}{M(Oxidation (M))|F}Y;[QP]GT{I|L}DT{I|L}{M(Oxidation (M))|F}Y;[QP]TG{I|L}ES{I|L}{M(Oxidation (M))|F}Y;[QP]TG{I|L}SE{I|L}{M(Oxidation (M))|F}Y;[QP]TG{I|L}TD{I|L}{M(Oxidation (M))|F}Y;[QT]PG{I|L}DT{I|L}{M(Oxidation (M))|F}Y;[QP]GT{I|L}ES{I|L}{M(Oxidation (M))|F}Y;[{I|L}T]G[QP]DT{I|L}{M(Oxidation (M))|F}Y;[QP]TG{I|L}ETV{M(Oxidation (M))|F}Y;[QP]GT{I|L}SE{I|L}{M(Oxidation (M))|F}Y 8.0766;7.4814;7.4707;7.1739;7.1739;6.9276;6.8755;6.7842;6.6889;6.5786 -;-;-;-;-;-;-;-;-;- 4152 1 2.024 100256.7 0.5099999904632568 5500 3593 9084 DOHH2_400M_050219_1,9095 DOHH2_400M_050219_1,9095,TLDPQTGLFY True True TLDPQTGLFY 52.28373 577.790698230267 975832.3125 9084.0 ENST00000531641.1_1_11:76237526-76255878:+|nuORF;;nc|ENSG00000158636|Q7Z589-5|EMSY;;nc|ENSG00000158636|Q7Z589-6|EMSY;;nc|ENSG00000158636|Q7Z589|EMSY;;nc|ENSG00000158636|Q7Z589-2|EMSY;;ENSG00000158636|ENST00000695367|EMSY;;nc|ENSG00000158636|Q7Z589-4|EMSY 7.355832417805989 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9096 52.298 800.0 159620.0 25 0 16321.0 -1 IEKFELVLRM 10 114 647.366631137925 1292.7187093426498 2 647.3687011599541 MULTI CID FTMS 0 0 0 9084 91309.046875 1.0 0 0.0 12 Oxidation (M) _IEKFELVLRM(Oxidation (M))_ ENSG00000150893|ENST00000280481|FREM2;nc|ENSG00000150893|Q5SZK8-2|FREM2 4.897010918128616 0.7039849508293987 1 Y 1 -1 11.109 0.0 0.0 0.85937 0.0 0.0 1111.6445649108125 0.0 1111.6445649108125 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.85937 - 33 + 1 2.024 108112.4 0.4900000095367431 5501 3593 9084 DOHH2_400M_050219_1,9096 DOHH2_400M_050219_1,9096,IEKFELVLRM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9097 52.313 800.0 108440.0 25 0 7200.0 45570 YVDQNQNSIC 10 121 592.253554506271 1182.492556079342 2 592.2537719607353 MULTI CID FTMS 0 0 0 9084 88725.5625 1.0 0 0.0 13 Unmodified _YVDQNQNSIC_ CON__Q1A7A4 36.506200033944 0.1944608063770638 1 YVD{[WN]|[YH]}QDP{M(Oxidation (M))|F} 9 5 + 55.862 0.0 0.0 4.7241 4.7241 83.376 0.0 0.0 0.0 36.88215652158085 2.9419939061767764 2.9419939061767764 9.208187539523747 0 0.0 2.0 0.805462187404089 0.3807196863200844 YVD{[WN]|[YH]}QDP{M(Oxidation (M))|F};YVD{[WN]|[YH]}[AG]DP{M(Oxidation (M))|F};YVD[HD][YQ]P{M(Oxidation (M))|F};YVD{[WN]|[YH]}[W{M(Oxidation (M))|F}][PG];[YV]DQ{[WN]|[YH]}DP{M(Oxidation (M))|F};[YV]D[AG]{[WN]|[YH]}DP{M(Oxidation (M))|F};[YV][YQ][HD]DP{M(Oxidation (M))|F};YTM{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YQ]P{M(Oxidation (M))|F};[YV][YQ]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M[{M(Oxidation (M))|F}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[WN]|[YH]}DP{M(Oxidation (M))|F} 4.7241;3.9453;3.8191;2.9674;2.9108;2.1321;2.0059;1.2713;1.1084;0.17386 -;-;-;-;-;-;-;-;-;- 116 + 1 2.024 67193.6 0.4600000083446502 5502 3593 9084 DOHH2_400M_050219_1,9097 DOHH2_400M_050219_1,9097,YVDQNQNSIC False False False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 9099 52.331 800.0 90312.0 25 0 7376.4 -1 SYSEREKNMHS 11 107 692.301124112616 1382.587695292032 2 692.3014404177666 MULTI CID FTMS 0 0 0 9098 42385.06640625 0.0896046213508414 2 -0.2062606811523437 1 Oxidation (M) _SYSEREKNM(Oxidation (M))HS_ chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS 17.11289562659939 0.6791789249425932 1 {[TV]|[{I|L}S]}DS{M(Oxidation (M))|F}SD{I|L} 8 -1 41.275 0.0 0.0 2.9854 0.0 0.0 0.0 515.1762932747068 515.1762932747068 10.921112219896637 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.91944517631652 0.0 {[TV]|[{I|L}S]}DS{M(Oxidation (M))|F}SD{I|L} 2.9854 - 984 1 2.024 60278.9 0.8899999856948853 5503 3594 9098 DOHH2_400M_050219_1,9099 DOHH2_400M_050219_1,9099,SYSEREKNMHS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9100 52.332 38.0 1662500.0 25 0 355380.0 -1 LRRYFCAIV 9 75 599.3314422010154 1196.6483314688307 2 599.3319579958916 MULTI CID FTMS 0 0 0 9098 1107296.375 1.0 0 0.0 2 Carbamidomethyl (C) _LRRYFC(Carbamidomethyl (C))AIV_ ENSG00000129566|ENST00000262715|TEP1;nc|ENSG00000129566|Q99973-2|TEP1 12.531546534597751 0.4974689918368763 1 V{I|L} 2 -1 21.009 0.0 0.0 1.7557 0.0 0.0 966.4870645761218 0.0 966.4870645761218 0.0 6.4049264096407335 0.0 0.0 0 0.4811132596518673 0.0 0.0 0.0 V{I|L} 1.7557 - 110 1 2.024 55449.9 1.0 5504 3594 9098 DOHH2_400M_050219_1,9100 DOHH2_400M_050219_1,9100,LRRYFCAIV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9101 52.336 226.0 364170.0 25 0 30180.0 + 5330 DLFRKALEL 9 79 552.8242696549598 1103.6339863767196 2 552.8244506716728 MULTI CID FTMS 0 0 0 9098 325332.15625 1.0 0 0.0 3 Unmodified _DLFRKALEL_ ENSG00000169189|ENST00000361439|NSMCE1;ENST00000565070.5_1_16:27237776-27268891:-|nuORF;ENST00000569236.5_1_16:27236480-27252833:-|nuORF 63.22749603027936 0.0242951379232427 1 {I|L}D{M(Oxidation (M))|F}{I|L} 4 7 49.457 0.0 0.0 4.4813 0.0 0.0 0.0 612.3639010065061 612.3639010065061 19.41962823435958 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 {I|L}D{M(Oxidation (M))|F}{I|L} 4.4813 - 344 + 1 2.024 65415.0 1.0 5505 3594 9098 DOHH2_400M_050219_1,9101 DOHH2_400M_050219_1,9101,DLFRKALEL True True DLFRKALEL 52.336102 552.824450671673 2057942.5 9098.0 ENST00000565070.5_1_16:27237776-27268891:-|nuORF;;ENSG00000169189|ENST00000361439|NSMCE1;;ENST00000569236.5_1_16:27236480-27252833:-|nuORF 4.924860795338948 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9102 52.34 232.0 172070.0 25 0 45981.0 -1 MLLPKKYHVLR 11 65 471.95258653566464 1412.835930207194 3 471.9521057009697 MULTI CID FTMS 0 0 0 9098 221110.90625 1.0 0 0.0 4 Oxidation (M) _M(Oxidation (M))LLPKKYHVLR_ ENSG00000002726|ENST00000360937|AOC1;nc|ENSG00000002726|P19801-2|AOC1 1.4551175022131473 0.8682825962816412 1 {I|L}{[QN]|[E{I|L}]|[KN]} 3 -1 5.6864 0.0 0.0 0.40248 0.0 0.0 1039.6345579921533 0.0 1039.6345579921533 0.0 3.46787486224656 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{[QN]|[E{I|L}]|[KN]} 0.40248 - 9 + 1 2.024 43340.6 1.0 5506 3594 9098 DOHH2_400M_050219_1,9102 DOHH2_400M_050219_1,9102,MLLPKKYHVLR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9103 52.349 499.0 235470.0 25 0 62613.0 + 5965 DQLLTQLLIVL 11 84 634.8928212476847 1267.7710895621692 2 634.8932372927666 MULTI CID FTMS 0 0 0 9098 213965.828125 0.8983023729439753 -2 0.2369117736816406 5 Unmodified _DQLLTQLLIVL_ REV__ENSG00000009954|ENST00000339594|BAZ1B 2.2527281973983926 0.8645194170429107 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 3 -1 5.4318 0.0 0.0 0.42845 0.0 0.0 0.0 908.5781018514848 908.5781018514848 3.442124970647031 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 0.42845 + + 16 1 2.024 94238.2 1.0 5507 3594 9098 DOHH2_400M_050219_1,9103 DOHH2_400M_050219_1,9103,DQLLTQLLIVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9104 52.357 412.0 136560.0 25 0 53125.0 45624 YVLKYLRRRF 10 54 707.4245692149913 1412.8345854967824 2 707.4252807497978 MULTI CID FTMS 0 0 0 9098 202751.390625 1.0 0 0.0 6 Unmodified _YVLKYLRRRF_ ENSG00000054793|ENST00000338821|ATP9A;nc|ENSG00000054793|O75110-2|ATP9A 0.4583401331227399 0.7245164002484112 1 R 1 9 0.71334 0.0 0.0 0.05049 0.0 0.0 1130.66644692432 123.04554163150624 1253.711988555826 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.05049 + + 1 + 1 2.024 61464.1 1.0 5508 3594 9098 DOHH2_400M_050219_1,9104 DOHH2_400M_050219_1,9104,YVLKYLRRRF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9105 52.362 279.0 207400.0 25 0 35260.0 30894 RIPPTRLSKPS 11 69 417.9222827497981 1250.7450188495943 3 417.9218322634697 MULTI CID FTMS 0 0 0 9098 187385.390625 0.5900466441629556 -1 0.0925750732421875 7 Unmodified _RIPPTRLSKPS_ nc|ENSG00000059377|P24557-3|TBXAS1 1.1933415558491238 0.8695176722560516 1 P 1 10 1.1092 0.0 0.0 0.088687 0.0 0.0 1030.6132419714677 120.05085931949452 1150.6641012909622 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.088687 + + 1 + 1 2.024 53131.1 1.0 5509 3594 9098 DOHH2_400M_050219_1,9105 DOHH2_400M_050219_1,9105,RIPPTRLSKPS False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 9106 52.373 633.0 244200.0 25 0 35673.0 + 23364 LTDKKKQRRL 10 119 643.4055941339442 1284.7966353346883 2 643.4064208865166 MULTI CID FTMS 0 0 0 9098 134878.078125 0.8490260225651646 -2 0.2369117736816406 8 Unmodified _LTDKKKQRRL_ REV__ENSG00000154162|ENST00000382254|CDH12;REV__ENST00000521384.5_1_5:21751848-21889748:-|nuORF;REV__nc|ENSG00000154162|P55289-2|CDH12 3.5964929083625545 0.7100006075494749 1 TNDQ{I|L} 5 -1 14.702 0.0 0.0 1.1443 0.0 0.0 112.2220026216008 598.3093966119749 710.5313992335757 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TNDQ{I|L} 1.1443 - 326 + 1 2.024 121713.9 1.0 5510 3594 9098 DOHH2_400M_050219_1,9106 DOHH2_400M_050219_1,9106,LTDKKKQRRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9107 52.387 800.0 96845.0 25 0 33408.0 18149 KTPKLRKFWNL 11 81 715.9375783966818 1429.8606038601636 2 715.9376098513603 MULTI CID FTMS 0 0 0 9098 122828.875 1.0 0 0.0 9 Unmodified _KTPKLRKFWNL_ ENSG00000021776|ENST00000156471|AQR 1.1933415558491238 0.8695176722560516 1 S 1 11 5.4846 0.0 0.0 0.38357 0.0 0.0 714.4389862837949 625.3542574518186 1339.7932437356135 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.38357 - 9 + 1 2.024 70658.8 0.5299999713897705 5511 3594 9098 DOHH2_400M_050219_1,9107 DOHH2_400M_050219_1,9107,KTPKLRKFWNL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9108 52.399 659.0 254790.0 25 0 18788.0 + 11170 GELPRGWNW 9 146 557.7749150145427 1113.5352770958852 2 558.2763549685478 MULTI CID FTMS 0 0 0 9098 128901.515625 0.2978722259584995 -2 0.2369117736816406 10 Unmodified _GELPRGWNW_ ENSG00000182552|ENST00000326397|RWDD4;ENST00000426392.1_1_7:39894095-39894470:-|nuORF;ENST00000488019.1_1_7:104942431-104942530:+|nuORF;nc|ENSG00000182552|Q6NW29-2|RWDD4 72.96794272382148 0.0199516581995792 1 {[DA]|[EG]}{I|L}PC(Carbamidomethyl (C))KKD 8 5 47.66 0.0 0.0 4.2801 0.0 0.0 0.0 183.05695520572505 183.05695520572505 12.70628956241454 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 1.110924374808178 1.1307196863200843 {[DA]|[EG]}{I|L}PC(Carbamidomethyl (C))KKD 4.2801 - 2626 + 1 2.024 126816.2 1.0 5512 3594 9098 DOHH2_400M_050219_1,9108 DOHH2_400M_050219_1,9108,GELPRGWNW True True GELPRGWNW 52.399313 557.7753 9542686.0 9098.0 ENST00000488019.1_1_7:104942431-104942530:+|nuORF;;ENST00000426392.1_1_7:39894095-39894470:-|nuORF;;ENSG00000182552|ENST00000326397|RWDD4;;nc|ENSG00000182552|Q6NW29-2|RWDD4 7.986905097961426 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9109 52.403 184.0 158390.0 25 0 27216.0 + 12675 GVLPKVSKRER 11 50 423.5981610034104 1267.7726536104312 3 423.5975829958916 MULTI CID FTMS 0 0 0 9098 120707.9453125 0.9699758325575928 -1 0.0925750732421875 11 Unmodified _GVLPKVSKRER_ REV__ENSG00000218819|ENST00000405799|TDRD15 0.5059551277355931 0.8727608062196215 1 P 1 -1 9.8329 0.0 0.0 0.7756 0.0 0.0 1152.708518944219 0.0 1152.708518944219 0.0 8.573821357596252 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.7756 + + 3 + 1 2.024 31697.8 1.0 5513 3594 9098 DOHH2_400M_050219_1,9109 DOHH2_400M_050219_1,9109,GVLPKVSKRER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9110 52.417 800.0 157980.0 25 0 22360.0 -1 0 60 848.0483264399921 2541.1231499201763 3 848.3838989138603 MULTI CID FTMS 0 0 0 9098 116705.4296875 1.0 0 0.0 12 1 G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3 -1 10.458 0.0 0.0 0.41153 0.0 0.0 2205.9739627637296 0.0 2205.9739627637296 0.0 3.4678748622465623 0.0 0.0 0 0.0 0.0 0.0 0.0 G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 0.41153 - 33 + 1 2.024 92142.5 0.5299999713897705 5514 3594 9098 DOHH2_400M_050219_1,9110 DOHH2_400M_050219_1,9110, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9111 52.426 464.0 230880.0 25 0 42446.0 + 13016 HASDVLLNL 9 122 491.2723319061295 980.530110879059 2 491.2729980349541 MULTI CID FTMS 0 0 0 9098 115315.1015625 0.7326604624234074 -1 0.0925750732421875 13 Unmodified _HASDVLLNL_ ENSG00000113916|ENST00000406870|BCL6;nc|ENSG00000113916|P41182-2|BCL6 57.47134341890925 0.0274820932774257 1 [HA]SDV{I|L}{I|L}N{I|L} 9 0 + 52.616 0.0 0.0 5.3661 5.3661 83.306 0.0 0.0 0.0 7.712665962669831 2.925515300088435 2.925515300088435 7.712665962669831 0 0.6435078169319297 0.6989700043360187 1.110924374808178 0.0 + + [HA]SDV{I|L}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}[SG]H{I|L}{I|L}N{I|L};[HA]SD{I|L}V{I|L}N{I|L};[HS]ADV{I|L}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[SG]H{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}[SG]{I|L}H{I|L}N{I|L};WWH{I|L}{I|L}N{I|L};[VS]{[DA]|[EG]}H{I|L}{I|L}N{I|L};[HS]AD{I|L}V{I|L}N{I|L};[HA]S[KQ]A{I|L}N{I|L} 5.3661;4.5795;4.1335;3.6801;3.4744;3.1674;2.9995;2.6148;2.4475;2.2225 +;-;-;-;-;-;-;-;-;- + 339 1 2.024 84810.5 1.0 5515 3594 9098 DOHH2_400M_050219_1,9111 DOHH2_400M_050219_1,9111,HASDVLLNL True True HASDVLLNL 52.426081 491.2719 1175396.125 9098.0 ENSG00000113916|ENST00000406870|BCL6;;nc|ENSG00000113916|P41182-2|BCL6 5.374070485432942 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9112 52.44 800.0 64533.0 25 0 3275.1 -1 0 83 1002.9758892692 2003.9372256052 2 1002.976367175579 MULTI CID FTMS 0 0 0 9098 106312.296875 0.2713305326630504 2 -0.2062606811523437 14 1 [MN]PN{I|L}NEQE 9 -1 56.889 0.0 0.0 2.8389 0.0 0.0 0.0 931.4639376276 931.4639376276 37.68114684785509 0.0 0.0 0.0 0 1.0044321917401078 1.5228787452803376 0.4247425010840047 0.0 [MN]PN{I|L}NEQE 2.8389 - 394 + 1 2.024 42583.6 0.4699999988079071 5516 3594 9098 DOHH2_400M_050219_1,9112 DOHH2_400M_050219_1,9112, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9113 52.454 800.0 128660.0 25 0 15926.0 + 29995 GENEYFRVF 9 136 580.7491920066585 1159.483831080117 2 580.7498046755791 MULTI CID FTMS 0 0 0 9098 106280.546875 1.0 0 0.0 15 Unmodified _QTEDNMLFY_ ENSG00000110395|ENST00000264033|CBL 48.345845343767074 0.0439967357579942 1 {[DA]|[EG]}GD[QT]M{I|L}{M(Oxidation (M))|F}Y 10 5 + 46.771 0.0 0.0 4.0338 4.0338 77.705 0.0 0.0 0.0 7.367778837722113 2.001962355242952 2.001962355242952 6.575221787320508 0 0.8935078169319297 1.2218487496163564 1.2803695511246984 1.075257498915995 {[DA]|[EG]}GD[QT]M{I|L}{M(Oxidation (M))|F}Y;{[DA]|[EG]}GD[MT]Q{I|L}{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}D[QT]M{I|L}{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}D[MT]Q{I|L}{M(Oxidation (M))|F}Y;{[DA]|[EG]}GD[MT][AG]{I|L}{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N[QT]M{I|L}{M(Oxidation (M))|F}Y;{[DA]|[EG]}GD[NP][YV]{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}D[MT][AG]{I|L}{M(Oxidation (M))|F}Y;{[CP]|[EA]}C(Carbamidomethyl (C)){[ET]|[MV]}Q{I|L}{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N[MT]Q{I|L}{M(Oxidation (M))|F}Y 4.0338;3.4667;2.9359;2.3688;2.0295;1.9971;1.5834;1.5747;1.4559;1.43 -;-;-;-;-;-;-;-;-;- 447 1 2.024 77720.4 0.5 5517 3594 9098 DOHH2_400M_050219_1,9113 DOHH2_400M_050219_1,9113,QTEDNMLFY True True GENEYFRVF 52.453777 580.749804675579 305141.21875 9098.0 ENSG00000110395|ENST00000264033|CBL 7.082635243733724 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9114 52.469 800.0 134830.0 25 0 8674.9 + 11188 GEMPPGLNF 9 162 481.2257051437461 960.436857354292 2 481.2256957888603 MULTI CID FTMS 0 0 0 9098 93101.296875 0.4540016221737204 2 -0.2062606811523437 16 Unmodified _GEMPPGLNF_ ENSG00000162735|ENST00000368072|PEX19 39.957323273325 0.0756908302845263 1 {[DA]|[EG]}M 3 6 22.536 0.0 0.0 2.3464 0.0 0.0 0.0 640.3090857080608 640.3090857080608 2.8296935994882944 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 + {[DA]|[EG]}M 2.3464 + + 361 1 2.024 83688.5 0.4199999868869781 5518 3594 9098 DOHH2_400M_050219_1,9114 DOHH2_400M_050219_1,9114,GEMPPGLNF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9115 52.474 303.0 172060.0 25 0 17604.0 + + 41110 VNNPHFLIM 9 109 542.7871291048314 1083.5597052764626 2 542.7852050662041 MULTI CID FTMS 0 0 0 9098 91953.3671875 0.7660982063716031 -2 0.2369117736816406 17 Unmodified _VNNIMLHMI_ ENSG00000136824|ENST00000374793|SMC2;nc|ENSG00000136824|O95347-2|SMC2 27.628801355627647 0.1796483985696185 1 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}PNNV{I|L}M 9 -1 + 37.502 0.0 0.0 3.461 3.461 74.514 0.0 0.0 0.0 4.771212547196626 8.706290716515927 4.771212547196626 4.771212547196626 0 0.8182503180159344 0.0 0.0 0.4247425010840047 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}PNNV{I|L}M;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HPNNV{I|L}M;{[{M(Oxidation (M))|F}H]|[RQ]}P{I|L}NNV{I|L}M;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}NNV{I|L}M;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}PGGNV{I|L}M;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}PNGGV{I|L}M;[YV]{I|L}[WP]Y{I|L}M;{[{M(Oxidation (M))|F}H]|[RQ]}P{I|L}GGNV{I|L}M;{[{M(Oxidation (M))|F}H]|[RQ]}P{I|L}NGGV{I|L}M;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HPNGGV{I|L}M 3.461;3.0207;3.0207;2.8581;2.6112;2.6112;2.4341;2.1708;2.1708;2.1708 -;-;-;-;-;-;-;-;-;- 490 1 2.024 46757.2 1.0 5519 3594 9098 DOHH2_400M_050219_1,9115 DOHH2_400M_050219_1,9115,VNNIMLHMI False False VNNPHFLIM 52.47431 542.785205066204 1159021.875 9098.0 ENSG00000136824|ENST00000374793|SMC2;;nc|ENSG00000136824|O95347-2|SMC2 8.037013371785482 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9116 52.488 800.0 104200.0 25 0 14449.0 + 15462 IPQWYLWRKRK 11 102 525.3093620553052 1572.9062567661151 3 525.3089477419853 MULTI CID FTMS 0 0 0 9098 77451.921875 0.8575176856039106 1 -0.1752471923828125 18 Unmodified _IPQWYLWRKRK_ REV__ENSG00000175354|ENST00000309660|PTPN2 1.4551175022131473 0.8682825962816412 1 {I|L} 1 -1 12.764 0.0 0.0 0.8115 0.0 0.0 1441.8113146047856 0.0 1441.8113146047856 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.8115 + + 125 + 1 2.024 71420.6 0.4099999964237213 5520 3594 9098 DOHH2_400M_050219_1,9116 DOHH2_400M_050219_1,9116,IPQWYLWRKRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9118 52.495 177.0 168910.0 25 0 15398.0 + 45560 YVDPQFLTY 9 61 573.2791170313125 1144.5436811294248 2 573.2795287966728 MULTI CID FTMS 0 0 0 9117 151552.328125 0.068664130803273 2 -0.0879707336425781 1 Unmodified _YVDPQFLTY_ ENSG00000181191|ENST00000374571|PJA1;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;nc|ENSG00000181191|Q8NG27|PJA1;nc|ENSG00000198961|O43164-2|PJA2 21.74664581756881 0.2544899275067181 1 [QP]{M(Oxidation (M))|F}D[YV]{I|L}TY 9 6 [QP]{M(Oxidation (M))|F}D[YV]{I|L} + + 21.454 14.225 1.6494 1.8744 1.8744 48.793 0.0 0.0 0.0 0.0 0.0809254783005961 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 [QP]{M(Oxidation (M))|F}D[YV]{I|L}TY 1.8744 - 83 + 1 2.024 28455.3 1.0 5521 3595 9117 DOHH2_400M_050219_1,9118 DOHH2_400M_050219_1,9118,YVDPQFLTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9119 52.502 385.0 141810.0 25 0 15242.0 + 32690 SDWVRDVAW 9 87 567.2720129020416 1132.5294728708832 2 567.2726318240166 MULTI CID FTMS 0 0 0 9117 110269.0078125 0.1057293401738732 2 -0.0879707336425781 2 Unmodified _SDWVRDVAW_ ENSG00000157020|ENST00000350697|SEC13;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 43.9818466556824 0.0535980856389242 1 {[DS]|[MA]|[CV]|TT}WVRDVAW 9 0 + 50.64 0.0 0.0 4.4714 4.4714 87.028 0.0 0.0 0.0 2.632192780232785 31.43175948177209 2.632192780232785 32.769250191953674 0 2.079689690656103 0.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}WVRDVAW;{[DS]|[MA]|[CV]|TT}WVRWA[DV];[KA][YC(Carbamidomethyl (C))][HV]VA{[DA]|[EG]} 4.4714;1.5779;0.69385 +;-;- + 78 1 2.024 44529.6 1.0 5522 3595 9117 DOHH2_400M_050219_1,9119 DOHH2_400M_050219_1,9119,SDWVRDVAW True True SDWVRDVAW 52.502381 567.272631824017 11675074.0 9117.0 ENSG00000157020|ENST00000350697|SEC13;;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;;nc|ENSG00000157020|P55735-2|SEC13;;nc|ENSG00000157020|P55735-4|SEC13;;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;;nc|ENSG00000157020|P55735-3|SEC13 8.572463512420654 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9120 52.505 126.0 1391100.0 25 0 161970.0 -1 0 91 914.4358935961618 1826.8572342591235 2 914.4365112185478 MULTI CID FTMS 0 0 0 9117 856039.625 0.8474143242276395 -1 0.1752471923828125 3 1 [YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 128.5 0.0 0.0 7.034 7.034 63.173 0.0 0.0 0.0 17.515873293491765 101.97895529337322 17.515873293491765 0.0 0 1.6307196863200843 1.2218487496163564 0.0 1.837180496500464 [YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ][EP]EA[AG]QNA{M(Oxidation (M))|F}YKV{I|L};[YQ]{M(Oxidation (M))|F}[HA]AQQGGA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}[HA]AQQGGA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EA[AG]QNA{M(Oxidation (M))|F}YQV{I|L} 7.034;7.034;7.034;7.034;6.5397;6.5397;6.5397;6.5397;6.5397;6.5397 -;-;-;-;-;-;-;-;-;- 3514 1 2.024 119885.3 1.0 5523 3595 9117 DOHH2_400M_050219_1,9120 DOHH2_400M_050219_1,9120, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9121 52.507 71.0 674460.0 25 0 138100.0 + 43468 WVDSDQLLY 9 80 569.7739146913516 1137.533276449503 2 569.7748290896416 MULTI CID FTMS 0 0 0 9117 727473.0625 0.5404417708611051 -3 0.4121589660644531 4 Unmodified _WVDSDQLLY_ ENSG00000116221|ENST00000360840|MRPL37 50.855029805455786 0.0384952370514206 1 {[QD]|[EN]|[WG]|[KD]|[RS]}SDWV{I|L}{I|L}Y 9 4 + 49.816 0.0 0.0 4.3793 4.3793 78.34 0.0 0.0 0.0 8.256886463274284 30.60788741577753 8.256886463274284 5.981362441963327 0 0.8935078169319297 0.0 0.805462187404089 0.3494850021680094 {[QD]|[EN]|[WG]|[KD]|[RS]}SDWV{I|L}{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}SD{I|L}VW{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}SD{I|L}[DG]{I|L}{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L}DVW{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[MD]Q{I|L}{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L}D[DG]{I|L}{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}SDVW{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}SD[TP]S{I|L}{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}SD[DG]{I|L}{I|L}Y;{[RE]|[WV]}WWW{I|L}Y 4.3793;3.8535;3.7246;3.5889;3.49;3.46;3.4341;3.3052;3.3052;3.095 -;-;-;-;-;-;-;-;-;- 224 1 2.024 40673.0 1.0 5524 3595 9117 DOHH2_400M_050219_1,9121 DOHH2_400M_050219_1,9121,WVDSDQLLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9122 52.509 83.0 683850.0 25 0 174740.0 + 9213 FGHPEVYIL 9 60 537.7836999496802 1073.5528469661604 2 537.7846557497978 MULTI CID FTMS 0 0 0 9117 685249.125 0.8984530428211265 -1 0.1752471923828125 5 Unmodified _FGHPEVYIL_ ENSG00000198804|ENST00000361624|MT-CO1 21.74664581756881 0.2544899275067181 1 VY{I|L}{I|L} 4 5 39.073 0.0 0.0 3.6396 0.0 0.0 567.2443714826187 0.0 567.2443714826187 0.0 23.58833010592525 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 + VY{I|L}{I|L} 3.6396 + + 46 1 2.024 49558.7 1.0 5525 3595 9117 DOHH2_400M_050219_1,9122 DOHH2_400M_050219_1,9122,FGHPEVYIL False True FGHPEVYIL 52.508551 537.784655749798 4864231.5 9117.0 ENSG00000198804|ENST00000361624|MT-CO1 6.05383316675822 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9123 52.513 220.0 196770.0 25 0 6831.3 -1 0 85 1042.5049157111046 2082.9952784890093 2 1042.505541980267 MULTI CID FTMS 0 0 0 9117 416145.78125 1.0 0 0.0 6 1 {I|L}QE{I|L}T[WM]{I|L}QETSSY 14 -1 91.628 0.0 0.0 4.3989 0.0 0.0 355.1468345867796 0.0 355.1468345867796 0.0 56.21723258065592 0.0 0.0 0 1.1549471895720984 0.0 1.048455006504028 0.2742275032520141 {I|L}QE{I|L}T[WM]{I|L}QETSSY 4.3989 - 4337 + 1 2.024 34863.0 1.0 5526 3595 9117 DOHH2_400M_050219_1,9123 DOHH2_400M_050219_1,9123, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9124 52.515 133.0 449480.0 25 0 75649.0 31621 RRASRHIVRT 10 55 626.37957652361 1250.74460011402 2 626.3799316287041 MULTI CID FTMS 0 0 0 9117 391666.46875 1.0 0 0.0 7 Unmodified _RRASRHIVRT_ ENST00000263663.9_1_2:9994458-10008411:+|nuORF 1.4819007175156935 0.719781833666733 1 M 1 10 3.9794 0.0 0.0 0.31816 0.0 0.0 660.4059903501512 456.2757967584594 1116.6817871086107 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.31816 - 3 + 1 2.024 51355.7 1.0 5527 3595 9117 DOHH2_400M_050219_1,9124 DOHH2_400M_050219_1,9124,RRASRHIVRT False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9125 52.519 191.0 318080.0 25 0 43494.0 + 36833 TELFRDSGTMW 11 64 671.8080741998644 1341.6015954665288 2 671.8085815310478 MULTI CID FTMS 0 0 0 9117 296470.78125 1.0 0 0.0 8 Unmodified _TELFRDSGTMW_ ENSG00000108651|ENST00000261708|UTP6 35.61225514009592 0.279986979807413 1 SGTMW 5 6 52.321 0.0 0.0 3.8999 0.0 0.0 761.363573142775 0.0 761.363573142775 0.0 39.18698160330543 0.0 0.0 0 0.9247425010840048 0.0 0.75 0.0 + SGTMW 3.8999 + + 72 1 2.024 51206.6 1.0 5528 3595 9117 DOHH2_400M_050219_1,9125 DOHH2_400M_050219_1,9125,TELFRDSGTMW False True TELFRDSGTMW 52.519141 671.808581531048 1736925.25 9117.0 ENSG00000108651|ENST00000261708|UTP6 7.302662372589111 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9127 52.524 58.0 900010.0 25 0 98975.0 + 40984 VMAPRTLLL 9 60 507.312404799569 1012.610256665938 2 507.3127319216728 MULTI CID FTMS 0 0 0 9126 953118.125 0.4245547655098909 2 -0.0790176391601562 1 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 32.78568957990786 0.1150597335874693 1 VMA 3 6 55.445 0.0 0.0 5.4755 0.0 0.0 0.0 708.4415572260327 708.4415572260327 26.42159058960253 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMA 5.4755 + + 31 + 1 2.024 45919.7 1.0 5529 3596 9126 DOHH2_400M_050219_1,9127 DOHH2_400M_050219_1,9127,VMAPRTLLL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9128 52.525 62.0 835440.0 25 0 94455.0 + 40642 VLDPYLLKY 9 59 562.3234621488801 1122.6323713645602 2 562.3236572146416 MULTI CID FTMS 0 0 0 9126 690788.375 0.264846135148181 2 -0.0790176391601562 2 Unmodified _VLDPYLLKY_ ENSG00000239789|ENST00000285298|MRPS17 36.12702656103203 0.0967173616627612 1 [{I|L}V]DPY{I|L}{I|L}KY 9 0 + 64.575 0.0 0.0 5.7521 5.7521 92.497 0.0 0.0 0.0 23.94016261540408 12.98332479720628 12.98332479720628 64.57502519061514 0 0.7742275032520141 2.0 0.0 0.0 + + [{I|L}V]DPY{I|L}{I|L}KY 5.7521 + + 161 + 1 2.024 46916.5 1.0 5530 3596 9126 DOHH2_400M_050219_1,9128 DOHH2_400M_050219_1,9128,VLDPYLLKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9129 52.527 71.0 654030.0 25 0 40299.0 + 10531 FVDPLVTNY 9 68 534.2739324521665 1066.533311971133 2 534.2743408083916 MULTI CID FTMS 0 0 0 9126 678285.375 0.8241546741911031 2 -0.0790176391601562 3 Unmodified _FVDPLVTNY_ ENSG00000043514|ENST00000316891|TRIT1;ENST00000462243.2_1_1:40318401-40323020:-|nuORF;ENST00000486825.6_1_1:40315918-40341739:-|nuORF;nc|ENSG00000043514|Q9H3H1-4|TRIT1 46.020951573049366 0.0490941689151868 1 [{I|L}P]DV{M(Oxidation (M))|F}V 6 7 40.129 0.0 0.0 3.7626 0.0 0.0 0.0 393.1421550659476 393.1421550659476 15.915674586542169 0.0 0.0 0.0 0 0.3252574989159953 1.154901959985743 0.5941876774005248 0.0 [{I|L}P]DV{M(Oxidation (M))|F}V 3.7626 - 123 1 2.024 39839.4 1.0 5531 3596 9126 DOHH2_400M_050219_1,9129 DOHH2_400M_050219_1,9129,FVDPLVTNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9130 52.535 458.0 219810.0 25 0 19867.0 + 844 AETPDIKLF 9 123 517.2814513798171 1032.548349826434 2 517.2822753787041 MULTI CID FTMS 0 0 0 9126 171845.484375 0.0023548903302798 9 -0.2829055786132812 4 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 30.7034409873982 0.1405282614900322 1 {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F} 9 0 + 47.841 0.0 0.0 4.6333 4.6333 78.574 0.0 0.0 0.0 7.147642715192504 5.118833609788744 5.118833609788744 5.118833609788744 0 0.9247425010840048 0.0 0.0 0.0 + + {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}TPD{I|L}K{M(Oxidation (M))|F}{I|L};[VP][{I|L}P]{I|L}DP[WP];{[CP]|[EA]}T[YV]{I|L}[QP]{I|L};{[CP]|[EA]}T[YV]{I|L}[{I|L}A]GP;{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}AAK{I|L}{M(Oxidation (M))|F};[K{I|L}]{I|L}D[YV][WP];[K{I|L}]D{I|L}[YV][WP];{[CP]|[EA]}T[YV]{I|L}[Q{I|L}]P;{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}AAK{M(Oxidation (M))|F}{I|L} 4.6333;4.1376;1.2212;1.2097;1.0193;1.0026;0.80869;0.71484;0.67821;0.50683 +;-;-;-;-;-;-;-;-;- + 934 + 1 2.024 78688.3 1.0 5532 3596 9126 DOHH2_400M_050219_1,9130 DOHH2_400M_050219_1,9130,AETPDIKLF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9131 52.54 250.0 682120.0 25 0 49270.0 + 45561 YVDPQFLTY 9 105 1145.551212764074 1144.543936297474 1 1145.551196277142 MULTI CID FTMS 0 0 0 9126 412037.46875 0.0565676432232497 3 -0.1138267517089843 5 Unmodified _YVDPQFLTY_ ENSG00000181191|ENST00000374571|PJA1;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;nc|ENSG00000181191|Q8NG27|PJA1;nc|ENSG00000198961|O43164-2|PJA2 90.13494162714682 0.0149365284241176 1 [QP]{M(Oxidation (M))|F}{I|L}DVYTY 9 6 + 85.697 0.0 0.0 7.4874 7.4874 64.112 0.0 0.0 0.0 14.471580313422194 16.478174818886373 14.471580313422194 0.0 0 0.5 1.5228787452803376 0.6747425010840047 0.5866968715561641 [QP]{M(Oxidation (M))|F}{I|L}DVYTY;[QP]{M(Oxidation (M))|F}{I|L}DYVTY;[QP]{M(Oxidation (M))|F}{I|L}YDVTY;[QP]{M(Oxidation (M))|F}D{I|L}YVTY;[QP]{M(Oxidation (M))|F}D{I|L}VYTY;[QP]D{M(Oxidation (M))|F}{I|L}YVTY;[QP]D{M(Oxidation (M))|F}{I|L}VYTY;[QP]{M(Oxidation (M))|F}{I|L}YVDTY;[QP]{M(Oxidation (M))|F}{I|L}DTYVY;[QP]{M(Oxidation (M))|F}DYV{I|L}TY 7.4874;7.4874;7.2717;7.2482;7.2482;6.9852;6.9852;6.9502;6.9402;6.8648 -;-;-;-;-;-;-;-;-;- 13688 1 2.024 106703.0 1.0 5533 3596 9126 DOHH2_400M_050219_1,9131 DOHH2_400M_050219_1,9131,YVDPQFLTY True True YVDPQFLTY 52.539974 1145.55119627714 44602188.0 9126.0 nc|ENSG00000181191|Q8NG27|PJA1;;ENSG00000181191|ENST00000374571|PJA1;;nc|ENSG00000181191|Q8NG27-2|PJA1;;nc|ENSG00000198961|O43164-2|PJA2;;ENSG00000198961|ENST00000361189|PJA2 7.732662677764893 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9132 52.548 474.0 255860.0 25 0 46846.0 -1 0 114 521.2967365712228 520.2894601046228 1 521.2966186404228 MULTI CID FTMS 0 0 0 9126 132888.65625 0.4486666568895803 -6 0.61712646484375 6 1 {M(Oxidation (M))|F}{I|L}E{I|L} 4 -1 + 53.418 0.0 0.0 10.267 10.267 91.921 0.0 0.0 0.0 9.645201071609897 13.354706403678875 9.645201071609897 7.567105390089331 0 0.8807196863200843 0.8860566476931632 0.7614393726401688 0.0 {M(Oxidation (M))|F}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L} 10.267;8.8126;6.52;5.5217 -;-;-;- 52 + 1 2.024 95892.0 1.0 5534 3596 9126 DOHH2_400M_050219_1,9132 DOHH2_400M_050219_1,9132, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9133 52.562 800.0 135770.0 25 0 7832.6 -1 0 98 966.9639424445278 1931.913331955856 2 967.4650756716728 MULTI CID FTMS 0 0 0 9126 104229.84375 0.0488206279523456 -9 1.0685310363769531 7 1 [MN]PN{I|L}NADQR[PG]DAN{I|L} 16 -1 102.58 0.0 0.0 5.3099 0.0 0.0 0.0 208.07317529849848 208.07317529849848 79.0042818264407 0.0 0.0 0.0 0 1.4731975075880328 1.5228787452803376 0.0 2.0585456211725206 [MN]PN{I|L}NADQR[PG]DAN{I|L} 5.3099 - 3624 + 1 2.024 79339.6 0.5099999904632568 5535 3596 9126 DOHH2_400M_050219_1,9133 DOHH2_400M_050219_1,9133, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9134 52.576 800.0 79260.0 25 0 2200.2 -1 0 93 1023.846806535116 3068.518590205548 3 1024.523608386517 MULTI CID FTMS 0 0 0 9126 112030.65625 0.663348856272265 -2 0.2062606811523437 8 1 {[QV]|[N{I|L}]|[RA]|[KV]}PN{[HG]|PP}PNY 9 -1 33.478 0.0 0.0 1.091 0.0 0.0 0.0 2059.0191144577543 2059.0191144577543 17.28015617153219 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}PN{[HG]|PP}PNY 1.091 - 2455 1 2.024 50704.2 0.5099999904632568 5536 3596 9126 DOHH2_400M_050219_1,9134 DOHH2_400M_050219_1,9134, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9136 52.588 473.0 106010.0 25 0 5887.0 -1 0 79 796.7048679667728 2387.0927745005183 3 797.3746215701103 MULTI CID FTMS 0 0 0 9135 77793.984375 0.6503709106850415 -5 0.5001296997070312 1 1 {[HG]|PP}APPPPP[EP]M 11 -1 29.2 0.0 0.0 1.2233 0.0 0.0 0.0 1276.502111898806 1276.502111898806 10.62233459839526 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[HG]|PP}APPPPP[EP]M 1.2233 - 833 1 2.024 42877.2 1.0 5537 3597 9135 DOHH2_400M_050219_1,9136 DOHH2_400M_050219_1,9136, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9137 52.59 54.0 1120800.0 25 0 148290.0 + 7895 ELNPKILAL 9 95 505.8151650514052 1009.6157771696104 2 505.8161193728447 MULTI CID FTMS 0 0 0 9135 845943.125 0.8733628990680534 -1 0.0569572448730468 2 Unmodified _ELNPKILAL_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 39.957323273325 0.0756908302845263 1 {[QN]|[E{I|L}]|[KN]}[{I|L}P]{I|L}E{I|L}A{I|L} 9 3 + 39.719 0.0 0.0 3.9341 3.9341 75.218 0.0 0.0 0.0 3.9904371307691378 7.319845938712042 3.9904371307691378 3.9904371307691378 0 0.7429928190999391 2.0 1.25 0.0 {[QN]|[E{I|L}]|[KN]}[{I|L}P]{I|L}E{I|L}A{I|L};[KP]{I|L}{I|L}NE{I|L}A{I|L};[KP]{I|L}N{I|L}E{I|L}A{I|L};[KP]{I|L}{I|L}A[DG]{I|L}A{I|L};[KP]N{I|L}{I|L}E{I|L}A{I|L};[KP]{I|L}{I|L}GGE{I|L}A{I|L};[KP]{I|L}A{I|L}[DG]{I|L}A{I|L};[{I|L}A][K{I|L}]P[DG]{I|L}A{I|L};[KP]{I|L}GG{I|L}E{I|L}A{I|L};[KP]{I|L}A[VG]E{I|L}A{I|L} 3.9341;3.5388;3.0663;2.9249;2.7681;2.6268;2.3286;2.2691;2.1542;2.0305 -;-;-;-;-;-;-;-;-;- 428 1 2.024 54400.1 1.0 5538 3597 9135 DOHH2_400M_050219_1,9137 DOHH2_400M_050219_1,9137,ELNPKILAL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9138 52.594 202.0 302550.0 25 0 20126.0 + 32982 SENAIVWKI 9 95 530.2950837605043 1058.5756145878086 2 530.2955200076103 MULTI CID FTMS 0 0 0 9135 239467.65625 0.873465870957623 1 -0.0220603942871093 3 Unmodified _SENAIVWKI_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000461733.5_1_3:183898306-183901401:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 53.40400417844725 0.0329064971918313 1 {[ES]|[DT]|[{I|L}C]}NA{I|L}VWK{I|L} 9 0 + 61.596 0.0 0.0 5.8187 5.8187 78.537 0.0 0.0 0.0 7.147642715192504 1.5970084286751174 1.5970084286751174 1.5970084286751174 0 1.9291746928241125 0.0 0.0 0.3252574989159953 + + {[ES]|[DT]|[{I|L}C]}NA{I|L}VWK{I|L};{[ES]|[DT]|[{I|L}C]}NA{I|L}VW{I|L}K;{[ES]|[DT]|[{I|L}C]}GGA{I|L}VWK{I|L};{[ES]|[DT]|[{I|L}C]}GGA{I|L}VW{I|L}K;{[ES]|[DT]|[{I|L}C]}NA{[RE]|[WV]}{I|L}K{I|L};{[ES]|[DT]|[{I|L}C]}GQ{I|L}VWK{I|L};{[ES]|[DT]|[{I|L}C]}GGA{[RE]|[WV]}{I|L}K{I|L};{[ES]|[DT]|[{I|L}C]}GQ{[RE]|[WV]}{I|L}K{I|L};{[QG]|[NA]}{I|L}V{[C(Carbamidomethyl (C))E]|[WC]}{I|L}K{I|L};[WK]{[CP]|[EA]}VWK{I|L} 5.8187;5.6679;4.9489;4.798;2.7497;2.5322;2.4221;1.9726;1.3097;1.0316 +;-;-;-;-;-;-;-;-;- + 217 + 1 2.024 51932.6 1.0 5539 3597 9135 DOHH2_400M_050219_1,9138 DOHH2_400M_050219_1,9138,SENAIVWKI True True SENAIVWKI 52.593621 530.29552000761 1659067.625 9135.0 ENST00000461733.5_1_3:183898306-183901401:+|nuORF;;nc|ENSG00000161203|Q96CW1-2|AP2M1;;ENSG00000161203|ENST00000292807|AP2M1 8.177811622619629 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9139 52.598 240.0 196810.0 25 0 9360.7 -1 0 68 973.97195700888 1945.92936108456 2 974.4744750857352 MULTI CID FTMS 0 0 0 9135 185019.484375 0.218006946619477 -7 0.6740837097167969 4 1 [MN][Q{I|L}]YYAQ 8 -1 24.442 0.0 0.0 1.2561 0.0 0.0 0.0 931.4639716723362 931.4639716723362 5.260847058321684 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.3807196863200844 [MN][Q{I|L}]YYAQ 1.2561 - 240 + 1 2.024 37227.8 1.0 5540 3597 9135 DOHH2_400M_050219_1,9139 DOHH2_400M_050219_1,9139, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9141 52.61 535.0 233810.0 25 0 20861.0 + 7546 EIGPRFVL 8 124 465.7741395435391 929.5337261538782 2 465.7737304568291 MULTI CID FTMS 0 0 0 9140 171159.078125 0.679433423664522 -3 0.1100311279296875 1 Unmodified _EIGPRFVL_ ENSG00000113460|ENST00000336767|BRIX1;ENST00000515798.5_1_5:34923288-34925101:+|nuORF 50.855029805455786 0.1352255786796883 1 {[QN]|[E{I|L}]|[KN]}[KS]{[QN]|[E{I|L}]|[KN]}V{I|L} 8 4 + 29.759 0.0 0.0 3.2016 3.2016 70.45 0.0 0.0 0.0 9.788559305164174 15.155396956255563 9.788559305164174 2.022211944742061 0 0.7614393726401688 2.0 1.2302046884880935 0.0 {[QN]|[E{I|L}]|[KN]}[KS]{[QN]|[E{I|L}]|[KN]}V{I|L};{[QN]|[E{I|L}]|[KN]}[WK]{[QN]|[E{I|L}]|[KN]}{I|L};{[QN]|[E{I|L}]|[KN]}[KS]V{[QN]|[E{I|L}]|[KN]}{I|L};{[QN]|[E{I|L}]|[KN]}[WK]{I|L}{I|L}E;[{I|L}T][WK][NG]V{I|L};[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}{[QN]|[E{I|L}]|[KN]}V{I|L};[{I|L}T][WR]{[QN]|[E{I|L}]|[KN]}{I|L};[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}V{[QN]|[E{I|L}]|[KN]}{I|L};[{I|L}T][WR]{I|L}{I|L}E;[KQ][NS]{[QN]|[E{I|L}]|[KN]}V{I|L} 3.2016;2.984;2.702;2.4228;2.0442;1.3965;1.179;0.897;0.61778;0.4263 -;-;-;-;-;-;-;-;-;- 349 1 2.024 99472.2 1.0 5541 3598 9140 DOHH2_400M_050219_1,9141 DOHH2_400M_050219_1,9141,EIGPRFVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9142 52.619 510.0 130200.0 25 0 29761.0 + 13259 HIIRFRLKW 9 68 634.8928212476847 1267.7710895621692 2 634.8932983279228 MULTI CID FTMS 0 0 0 9140 154903.5625 0.6503386030872793 2 -0.0649032592773437 2 Unmodified _HIIRFRLKW_ REV__ENSG00000170209|ENST00000303941|ANKK1 1.1933415558491238 0.8730252149911817 1 W 1 -1 11.99 0.0 0.0 0.94573 0.0 0.0 1063.680923401816 0.0 1063.680923401816 0.0 10.395906230238126 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.94573 + + 7 + 1 2.024 57497.4 1.0 5542 3598 9140 DOHH2_400M_050219_1,9142 DOHH2_400M_050219_1,9142,HIIRFRLKW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9143 52.633 800.0 72023.0 25 0 5930.4 -1 0 89 1193.547820822741 3577.621633068423 3 1194.552050769329 MULTI CID FTMS 0 0 0 9140 77133.0234375 0.2456468892724483 -10 1.0011711120605469 3 1 PPPPP 5 -1 27.959 0.0 0.0 0.78149 0.0 0.0 2735.1930463036306 354.1423739068969 3089.3354202105274 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPPP 0.78149 - 86 + 1 2.024 40985.7 0.5199999809265137 5543 3598 9140 DOHH2_400M_050219_1,9143 DOHH2_400M_050219_1,9143, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9145 52.649 795.0 128920.0 25 0 32538.0 31441 RPQRRRPKAS 10 104 417.9222827497981 1250.7450188495943 3 417.9223510622978 MULTI CID FTMS 0 0 0 9144 101568.34375 0.3198224801996994 4 -0.0755386352539062 1 Unmodified _RPQRRRPKAS_ ENST00000570718.5_1_17:4618488-4619298:+|nuORF 1.6526216038709556 0.7189921496796233 1 {I|L} 1 10 10.278 0.0 0.0 0.82172 0.0 0.0 1119.6503055701005 0.0 1119.6503055701005 0.0 3.287886595888967 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.82172 - 10 + 1 2.024 84449.6 1.0 5544 3599 9144 DOHH2_400M_050219_1,9145 DOHH2_400M_050219_1,9145,RPQRRRPKAS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9146 52.663 800.0 154660.0 25 0 11203.0 + 8432 ESLEELFVRL 10 141 412.227867242084 1233.661772326452 3 412.2270690798759 MULTI CID FTMS 0 0 0 9144 93247.2109375 0.9410042240811256 3 -0.0554008483886718 2 Unmodified _ESLEELFVRL_ REV__ENSG00000155754|ENST00000439140|C2CD6 7.945399516374404 0.6898843699695153 1 {I|L}{I|L}{M(Oxidation (M))|F}VR 5 -1 38.928 0.0 0.0 3.1555 0.0 0.0 587.2452943217119 0.0 587.2452943217119 0.0 30.934903007429035 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F}VR 3.1555 - 75 + 1 2.024 100843.3 0.3799999952316284 5545 3599 9144 DOHH2_400M_050219_1,9146 DOHH2_400M_050219_1,9146,ESLEELFVRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9148 52.67 182.0 359350.0 25 0 25879.0 + 11171 GELPRGWNW 9 101 557.7749150145427 1113.5352770958852 2 557.7754394412041 MULTI CID FTMS 0 0 0 9147 315969.5625 0.4910654582598833 5 -0.1389846801757812 1 Unmodified _GELPRGWNW_ ENSG00000182552|ENST00000326397|RWDD4;ENST00000426392.1_1_7:39894095-39894470:-|nuORF;ENST00000488019.1_1_7:104942431-104942530:+|nuORF;nc|ENSG00000182552|Q6NW29-2|RWDD4 43.85829265575387 0.0542763391141878 1 {[DA]|[EG]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KKN 8 4 40.423 0.0 0.0 3.6302 0.0 0.0 0.0 184.04049097232652 184.04049097232652 15.298859261803983 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.4247425010840047 1.3494850021680094 {[DA]|[EG]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KKN 3.6302 - 347 + 1 2.024 56179.6 1.0 5546 3600 9147 DOHH2_400M_050219_1,9148 DOHH2_400M_050219_1,9148,GELPRGWNW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9149 52.684 800.0 112460.0 25 0 7326.5 -1 0 109 644.9790583940428 1931.915345782328 3 645.3138915896416 MULTI CID FTMS 0 0 0 9147 83447.6796875 0.4923069825134349 -5 0.1749343872070312 2 1 [MN]P{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}QWNVPGA 13 -1 37.099 0.0 0.0 1.9203 0.0 0.0 0.0 460.1867976426588 460.1867976426588 16.893129978249906 0.0 0.0 0.0 0 0.6307196863200843 1.5228787452803376 0.0 0.3494850021680094 [MN]P{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}QWNVPGA 1.9203 - 1435 1 2.024 77301.1 0.4300000071525574 5547 3600 9147 DOHH2_400M_050219_1,9149 DOHH2_400M_050219_1,9149, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9152 52.697 315.0 159480.0 25 0 17312.0 + -1 FGQGCLLCR 9 78 555.7645985642821 1109.514644195364 2 555.2670165896416 MULTI CID FTMS 0 0 0 9151 87449.046875 0.7852205261475407 4 -0.1525459289550781 1 2 Carbamidomethyl (C) _FGQGC(Carbamidomethyl (C))LLC(Carbamidomethyl (C))R_ REV__ENSG00000198300|ENST00000326441|PEG3;REV__nc|ENSG00000198300|Q9GZU2-2|PEG3;REV__nc|ENSG00000198300|Q9GZU2-4|PEG3;REV__PEG3|p.Y1315*|1|0.21|ENSG00000198300|chr19:56814497-56814497|A/-|frameshift_variant 11.640296217721598 0.521594087909532 1 RSW 3 -1 30.445 0.0 0.0 2.744 0.0 0.0 662.2817860334 0.0 662.2817860334 0.0 13.494850021680094 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 RSW 2.744 - 130 1 2.024 45452.6 1.0 5548 3602 9151 DOHH2_400M_050219_1,9152 DOHH2_400M_050219_1,9152,FGQGCLLCR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9153 52.709 681.0 239190.0 25 0 43133.0 + 39351 RELENLIGI 9 140 528.8056906816162 1055.5968284300322 2 528.8062621951103 MULTI CID FTMS 0 0 0 9151 112229.5 0.7708225569454741 -1 0.0040702819824218 2 Unmodified _VAGHPHRIGL_ ENST00000462285.5_1_1:63919583-63920635:-|nuORF;nc|ENSG00000142856|Q13352-2|ITGB3BP;ENST00000460394.5_1_1:63917661-63988804:-|nuORF;nc|ENSG00000142856|Q13352-5|ITGB3BP;ENST00000461681.5_1_1:63906715-63922830:-|nuORF;ENSG00000142856|ENST00000271002|ITGB3BP 34.10243960390752 0.2198439752719791 1 {[RE]|[WV]}{I|L}EN{I|L}{I|L}G{I|L} 9 6 + 60.187 0.0 0.0 5.7017 5.7017 86.901 0.0 0.0 0.0 2.632192780232785 36.741472412876064 2.632192780232785 9.208187539523747 0 1.3807196863200843 0.0 0.0 0.3807196863200844 {[RE]|[WV]}{I|L}EN{I|L}{I|L}G{I|L};{[RE]|[WV]}{I|L}EGG{I|L}{I|L}G{I|L};{NN|[MP]|[D{I|L}]|[EV]}[W{I|L}]N{I|L}{I|L}G{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}G{I|L};{NN|[MP]|[D{I|L}]|[EV]}[W{I|L}]GG{I|L}{I|L}G{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[WP]M{I|L}{I|L}G{I|L};[{I|L}A]{[WT]|[RM]}[WP]{I|L}G{I|L};{[ES]|[DT]|[{I|L}C]}[RV][WP]{I|L}G{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}GVV{I|L}[TP];{[RE]|[WV]}{I|L}E[KA][TP]{I|L} 5.7017;4.8294;4.7103;4.0219;3.8379;3.6843;2.671;2.3691;1.5498;1.4574 -;-;-;-;-;-;-;-;-;- 512 1 2.024 124946.8 1.0 5549 3602 9151 DOHH2_400M_050219_1,9153 DOHH2_400M_050219_1,9153,VAGHPHRIGL False False RELENLIGI 52.708504 528.80626219511 859910.3125 9151.0 ENST00000462285.5_1_1:63919583-63920635:-|nuORF;;nc|ENSG00000142856|Q13352-2|ITGB3BP;;ENST00000460394.5_1_1:63917661-63988804:-|nuORF;;nc|ENSG00000142856|Q13352-5|ITGB3BP;;ENST00000461681.5_1_1:63906715-63922830:-|nuORF;;ENSG00000142856|ENST00000271002|ITGB3BP 3.830047925313314 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9155 52.725 800.0 158190.0 25 0 17737.0 + 40713 VLGVVVVV 8 82 783.5341897274437 782.5269132608437 1 783.5348998904228 MULTI CID FTMS 0 0 0 9154 88419.96875 0.4087552214205933 5 -0.2107353210449218 1 Unmodified _VLGVVVVV_ REV__ENSG00000119973|ENST00000239032|PRLHR 64.08090720244739 0.1161809961245979 1 VVG{I|L}VVVV 8 -1 + 68.542 0.0 0.0 8.759 8.759 88.68 0.0 0.0 0.0 5.740312677277188 16.40978057358332 5.740312677277188 4.771212547196626 0 0.9436726795685342 0.7958800173440752 0.0 0.0 VVG{I|L}VVVV;VVVAVVVV;VVAVVVVV;[{I|L}V]GVVVVV;VVGV{I|L}VVV;VV{I|L}GVVVV;[{I|L}V]VGVVVV;VVVG{I|L}VVV;VVGVV{I|L}VV;VVV{I|L}GVVV 8.759;8.1493;8.1493;8.0255;8.0054;7.7646;7.6408;7.3957;7.2703;6.786 -;-;-;+;-;-;-;-;-;- + 582 1 2.024 92171.4 0.5699999928474426 5550 3603 9154 DOHH2_400M_050219_1,9155 DOHH2_400M_050219_1,9155,VLGVVVVV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9156 52.735 590.0 118410.0 25 0 9906.5 28923 QAQNCLTKLY 10 119 591.3009648607027 1180.5873767882051 2 591.3022338747978 MULTI CID FTMS 0 0 0 9154 129055.453125 1.0 0 0.0 2 Unmodified _QAQNCLTKLY_ nc|ENSG00000144406|Q8N2C7-7|UNC80 20.453626601364224 0.5043500229302764 1 [QA]QNA{M(Oxidation (M))|F}Y 7 5 36.744 0.0 0.0 3.1123 0.0 0.0 0.0 355.1996564115054 355.1996564115054 4.628166097663851 0.0 0.0 0.0 0 0.0 0.0 0.0 2.1549471895720984 [QA]QNA{M(Oxidation (M))|F}Y 3.1123 - 918 1 2.024 58797.4 1.0 5551 3603 9154 DOHH2_400M_050219_1,9156 DOHH2_400M_050219_1,9156,QAQNCLTKLY False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 9157 52.749 800.0 158020.0 25 0 11144.0 -1 0 121 902.9104188740472 1803.806284814894 2 903.4114257693292 MULTI CID FTMS 0 0 0 9154 79523.703125 0.2000714586271138 -4 0.0755386352539062 3 1 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQENA{M(Oxidation (M))|F}YEV 14 -1 105.44 0.0 0.0 5.8454 0.0 0.0 0.0 127.07196686106262 127.07196686106262 81.53827484987046 0.0 0.0 0.0 0 0.5501648626366046 1.5228787452803376 0.3807196863200844 1.4049471895720984 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQENA{M(Oxidation (M))|F}YEV 5.8454 - 5269 1 2.024 88867.5 0.5199999809265137 5552 3603 9154 DOHH2_400M_050219_1,9157 DOHH2_400M_050219_1,9157, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9158 52.763 800.0 42714.0 25 0 1668.1 -1 0 69 1005.1626010137662 0 1005.173022449017 PEAK CID FTMS 0 0 0 -1 0 4 1 N{I|L} 2 -1 10.969 0.0 0.0 0.54619 0.0 0.0 1570.0865718011669 208.07302271060783 1778.1595945117745 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N{I|L} 0.54619 - 17 + 1 2.024 30540.1 0.5199999809265137 5553 3603 9154 DOHH2_400M_050219_1,9158 DOHH2_400M_050219_1,9158, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9160 52.769 84.0 420210.0 25 0 77010.0 + 43469 WVDSDQLLY 9 67 569.7739146913516 1137.533276449503 2 569.7746459841728 MULTI CID FTMS 0 0 0 9159 456637.0625 0.3392369496819865 6 -0.2709808349609375 1 Unmodified _WVDSDQLLY_ ENSG00000116221|ENST00000360840|MRPL37 26.88365393820708 0.1891292719743517 1 DWV{I|L}{I|L}Y 6 5 33.689 0.0 0.0 2.9616 0.0 0.0 330.11619765449376 0.0 330.11619765449376 0.0 16.699784405891762 0.0 0.0 0 0.8182503180159344 0.0 0.4247425010840047 0.0 DWV{I|L}{I|L}Y 2.9616 - 42 1 2.024 33634.3 1.0 5554 3604 9159 DOHH2_400M_050219_1,9160 DOHH2_400M_050219_1,9160,WVDSDQLLY False True WVDSDQLLY 52.768691 569.774645984173 9140549.0 9159.0 ENSG00000116221|ENST00000360840|MRPL37 5.346559206644694 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9161 52.783 800.0 152310.0 25 0 16939.0 -1 0 83 914.4358935961618 1826.8572342591235 2 914.4371215701104 MULTI CID FTMS 0 0 0 9159 118775.984375 0.1175792189918933 8 -0.3573150634765625 2 1 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 123.14 0.0 0.0 6.7403 6.7403 62.481 0.0 0.0 0.0 23.21231634923143 104.71975686141758 23.21231634923143 0.0 0 1.0941876774005248 1.6989700043360187 0.4247425010840047 1.4124379954164592 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQ[AG]NA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQGGA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQQGGA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ][EP]EA[AG]QNA{M(Oxidation (M))|F}YQV{I|L} 6.7403;6.7403;6.5078;6.5078;6.246;6.246;6.246;6.246;6.246;6.246 -;-;-;-;-;-;-;-;-;- 1710 1 2.024 85545.7 0.8100000023841858 5555 3604 9159 DOHH2_400M_050219_1,9161 DOHH2_400M_050219_1,9161, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9162 52.788 310.0 447720.0 25 0 25463.0 303 ADTTLDESIY 10 124 564.2585902051512 1126.5026274771024 2 564.2596923708916 MULTI CID FTMS 0 0 0 9159 143934.75 0.0175873812473969 -5 0.1299552917480468 3 Unmodified _ADTTLDESIY_ ENSG00000183813|ENST00000330953|CCR4 25.399314129420983 0.3980215340001851 1 [TA]D{I|L}Y 5 5 42.893 0.0 0.0 3.8076 0.0 0.0 0.0 560.2277000691523 560.2277000691523 20.68636235841012 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 1.5669015600442575 0.0 [TA]D{I|L}Y 3.8076 - 329 1 2.024 108016.2 1.0 5556 3604 9159 DOHH2_400M_050219_1,9162 DOHH2_400M_050219_1,9162,ADTTLDESIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9163 52.802 800.0 149020.0 25 0 9452.9 + -1 RIAEFAFEY 9 144 572.7838315515135 1143.5531101698268 2 573.2856323122978 MULTI CID FTMS 0 0 0 9159 89031.7734375 0.8745453768277688 -1 0.0544166564941406 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))IVRFWTY_ ENSG00000166411|ENST00000299518|IDH3A;nc|ENSG00000166411|P50213-2|IDH3A;ENST00000558509.5_1_15:78453927-78455839:+|nuORF 10.183394434864962 0.7604730176254005 1 ERMHKTY 7 -1 33.849 0.0 0.0 2.9599 0.0 0.0 180.07123865060709 0.0 180.07123865060709 0.0 19.32290194203233 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 ERMHKTY 2.9599 - 1050 + 1 2.024 95662.6 0.4300000071525574 5557 3604 9159 DOHH2_400M_050219_1,9163 DOHH2_400M_050219_1,9163,CIVRFWTY False False RIAEFAFEY 52.802037 573.285632312298 736510.875 9159.0 ENSG00000166411|ENST00000299518|IDH3A;;nc|ENSG00000166411|P50213-2|IDH3A;;ENST00000558509.5_1_15:78453927-78455839:+|nuORF 4.316386381785075 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9165 52.807 51.0 1638000.0 25 0 84835.0 -1 0 83 966.9639424445278 1931.913331955856 2 967.4669677615166 MULTI CID FTMS 0 0 0 9164 2134955.0 1.0 0 0.0 1 1 [NP]{I|L}NAD[PG]GVKD{[QG]|[NA]}{I|L}DP[EP] 19 -1 + 98.399 0.0 0.0 5.0933 5.0933 81.618 0.0 0.0 0.0 18.213615519304383 78.10817362400445 18.213615519304383 6.754889084864956 0 1.2059771852360797 1.0457574905606752 0.0 1.086696871556164 [NP]{I|L}NAD[PG]GVKD{[QG]|[NA]}{I|L}DP[EP];[NP]{I|L}NAD[PG]GVQ{[WN]|[YH]}{I|L}DP[EP];[NP]{I|L}NAD[NP]VKD{[QG]|[NA]}{I|L}DP[EP];[NP]{I|L}NAD[PG]RQ{[WN]|[YH]}{I|L}DP[EP];[NP]{I|L}NAD[PG]RKD{[QG]|[NA]}{I|L}D[WH];[NP]{I|L}NAD[NP]VQ{[WN]|[YH]}{I|L}DP[EP];[NP]{I|L}NAD[PG]GVKDYQ{[TV]|[{I|L}S]}[MN];[NP]{I|L}NAD[PG]GVQDYH[{I|L}P][EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}{[QG]|[NA]}DKR[PG]DYQ{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}{[WN]|[YH]}QVG[PG]DYQ{[TV]|[{I|L}S]} 5.0933;4.7437;4.7024;4.3947;4.3947;4.3535;4.2254;4.1342;3.9837;3.9837 -;-;-;-;-;-;-;-;-;- 3989 1 2.024 63161.8 1.0 5558 3605 9164 DOHH2_400M_050219_1,9165 DOHH2_400M_050219_1,9165, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9166 52.818 611.0 183600.0 25 0 10980.0 + 845 AETPDIKLF 9 138 517.2814513798171 1032.548349826434 2 517.2817260622978 MULTI CID FTMS 0 0 0 9164 95324.9140625 0.0013062881412157 18 -0.6057319641113281 2 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 30.7034409873982 0.1405282614900322 1 {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F} 9 0 + 40.06 0.0 0.0 3.8797 3.8797 76.783 0.0 0.0 0.0 -1.6667320138063246 3.37205316164642 -1.6667320138063246 6.020599913279618 0 0.9247425010840048 0.0 0.0 0.0 + + {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}TPD{I|L}K{M(Oxidation (M))|F}{I|L};{[CP]|[EA]}T[YV]{I|L}[QP]{I|L};{[CP]|[EA]}T[YV]{I|L}[{I|L}A]GP;[K{I|L}]D{I|L}[YV][WP];{[CP]|[EA]}T[YV]{I|L}[Q{I|L}]P;[TA][{I|L}A]{I|L}[YV][WP] 3.8797;3.2966;1.0285;1.0285;0.71484;0.68746;0.24156 +;-;-;-;-;-;- + 279 + 1 2.024 89559.8 1.0 5559 3605 9164 DOHH2_400M_050219_1,9166 DOHH2_400M_050219_1,9166,AETPDIKLF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9167 52.831 800.0 291010.0 25 0 13355.0 + 8244 EQDPEGLHLW 10 170 612.2875920951275 1222.5606312570549 2 612.2874633669853 MULTI CID FTMS 0 0 0 9164 117349.4296875 0.9242152487889184 1 -0.0388679504394531 3 Unmodified _EQDPEGLHLW_ ENSG00000158615|ENST00000367188|PPP1R15B 49.93300154707207 0.0805441195901191 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DPE{[VA]|[{I|L}G]}H{I|L}W 10 0 + 37.724 0.0 0.0 3.0857 3.0857 74.238 0.0 0.0 0.0 1.886670626328176 1.717264536532305 1.717264536532305 5.579695330640355 0 0.5010912013506126 0.0 1.110924374808178 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DPE{[VA]|[{I|L}G]}H{I|L}W;[AG]E[Y{I|L}]{I|L}DAD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DPMT{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DP[{M(Oxidation (M))|F}T][NP]{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DP[W{I|L}]H{I|L}W;[H{I|L}]G{I|L}EPDAD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DPE{[VA]|[{I|L}G]}HW{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}EPE{[VA]|[{I|L}G]}H{I|L}W;[AG]E[Y{I|L}]{I|L}WD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]G[EP]{I|L}DAD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.0857;2.6293;2.61;2.602;2.5003;2.4998;2.4801;2.3397;2.3376;2.3183 +;-;-;-;-;-;-;-;-;- + 3122 + 1 2.024 171542.8 0.4900000095367431 5560 3605 9164 DOHH2_400M_050219_1,9167 DOHH2_400M_050219_1,9167,EQDPEGLHLW True True EQDPEGLHLW 52.831387 612.287463366985 679210.3125 9164.0 ENSG00000158615|ENST00000367188|PPP1R15B 7.649687767028809 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9168 52.841 542.0 163410.0 25 0 7646.1 + 6956 EEIDLRSVGW 10 113 602.3041483079089 1202.5937436826175 2 602.3039428591728 MULTI CID FTMS 0 0 0 9164 94852.7578125 1.0 0 0.0 4 Unmodified _EEIDLRSVGW_ ENSG00000110057|ENST00000227471|UNC93B1 57.24910588100465 0.0438022649904578 1 EE{I|L}D{I|L} 5 5 38.5 0.0 0.0 3.2014 0.0 0.0 0.0 600.290352783473 600.290352783473 7.570071809000609 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 + EE{I|L}D{I|L} 3.2014 + + 148 + 1 2.024 68461.1 1.0 5561 3605 9164 DOHH2_400M_050219_1,9168 DOHH2_400M_050219_1,9168,EEIDLRSVGW True True EEIDLRSVGW 52.840914 602.303942859173 449421.09375 9164.0 ENSG00000110057|ENST00000227471|UNC93B1 6.275692462921143 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9170 52.856 650.0 145210.0 25 0 16797.0 + 7896 ELNPKILAL 9 124 505.8151650514052 1009.6157771696104 2 505.8160278201103 MULTI CID FTMS 0 0 0 9169 62751.4453125 0.0647854241960243 8 -0.3038368225097656 1 Unmodified _ELNPKILAL_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 52.268347100219714 0.0353964759249114 1 {[QN]|[E{I|L}]|[KN]}[{I|L}P]{I|L}E{I|L}A{I|L} 9 3 + 51.506 0.0 0.0 5.1015 5.1015 86.501 0.0 0.0 0.0 11.517412290202664 8.824995917031941 8.824995917031941 11.517412290202664 0 1.1237125054200234 2.0 1.2302046884880935 0.2614393726401688 {[QN]|[E{I|L}]|[KN]}[{I|L}P]{I|L}E{I|L}A{I|L};[KP]{I|L}{I|L}NE{I|L}A{I|L};[KP]{I|L}N{I|L}E{I|L}A{I|L};[KP]N{I|L}{I|L}E{I|L}A{I|L};[KP]{I|L}{I|L}A[DG]{I|L}A{I|L};[KP]{I|L}{I|L}GGE{I|L}A{I|L};[KP]{I|L}GG{I|L}E{I|L}A{I|L};[KP]GG{I|L}{I|L}E{I|L}A{I|L};[KP]{I|L}A{I|L}[DG]{I|L}A{I|L};[{I|L}A]K{I|L}P[DG]{I|L}A{I|L} 5.1015;3.9607;3.9215;3.7471;3.5842;3.0487;3.0095;2.8351;2.7472;2.7062 -;-;-;-;-;-;-;-;-;- 734 1 2.024 78188.2 1.0 5562 3606 9169 DOHH2_400M_050219_1,9170 DOHH2_400M_050219_1,9170,ELNPKILAL True True ELNPKILAL 52.856104 505.81602782011 5421052.0 9169.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 5.394673983256022 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9171 52.87 799.0 127730.0 25 0 12409.0 + 14262 IEFLQRPL 8 146 508.29914309529664 1014.5837332573932 2 508.2979308962822 MULTI CID FTMS 0 0 0 9169 84867.5703125 1.0 0 0.0 2 Unmodified _IEFLQRPL_ REV__ENSG00000151806|ENST00000281543|GUF1;REV__ENST00000506793.5_1_4:44680541-44700695:+|nuORF 18.13498045792455 0.6430038125133779 1 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L} 4 -1 32.307 0.0 0.0 3.1843 0.0 0.0 0.0 509.28467737369374 509.28467737369374 16.321136738781163 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L} 3.1843 + + 96 + 1 2.024 80504.0 1.0 5563 3606 9169 DOHH2_400M_050219_1,9171 DOHH2_400M_050219_1,9171,IEFLQRPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9172 52.884 800.0 128140.0 25 0 7442.7 + 25176 MSGPAWQL 8 123 889.4203363843583 888.4130599177582 1 889.4207031130791 MULTI CID FTMS 0 0 0 9169 136658.8125 0.4729434483582043 4 -0.1929893493652343 3 Unmodified _MSGPAWQL_ ENSG00000115758|ENST00000234111|ODC1 57.47134341890925 0.1146309765603773 1 {M(Oxidation (M))|F}ESMQ{I|L} 6 5 48.581 0.0 0.0 5.4683 0.0 0.0 135.06863600898595 0.0 135.06863600898595 0.0 28.915637991638544 0.0 0.0 0 0.8494850021680094 0.0 1.274227503252014 0.0 {M(Oxidation (M))|F}ESMQ{I|L} 5.4683 - 1101 1 2.024 69622.6 0.5600000023841858 5564 3606 9169 DOHH2_400M_050219_1,9172 DOHH2_400M_050219_1,9172,MSGPAWQL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9173 52.898 800.0 144800.0 25 0 13278.0 + 55 AADETLRLW 9 151 537.7836999496802 1073.5528469661604 2 537.7814819216728 MULTI CID FTMS 0 0 0 9169 82258.359375 0.1078516857324589 10 -0.3380355834960937 4 Unmodified _AADETLRLW_ ENSG00000117399|ENST00000310955|CDC20 57.72198328787511 0.0273433238377839 1 AADET{I|L}RW{I|L} 9 2 + 77.978 0.0 0.0 7.2635 7.2635 86.057 0.0 0.0 0.0 22.37643016799588 4.221675119240516 4.221675119240516 4.221675119240516 0 1.555462187404089 1.5228787452803376 0.2887254899964357 0.3494850021680094 AADET{I|L}RW{I|L};AADET{I|L}R{I|L}W;AADET[WR]{I|L}{I|L};DD[VG]T{I|L}RW{I|L};DD[VG]T{I|L}R{I|L}W;AA[RH]T[VP]HW;AA[HK]V{[{M(Oxidation (M))|F}C]|[YS]}W{I|L};AA[HK]V{[{M(Oxidation (M))|F}C]|[YS]}{I|L}W;DD[VG]T[WR]{I|L}{I|L};{[CT]|[{M(Oxidation (M))|F}G]}H[VP]EY{I|L}{I|L} 7.2635;6.8703;5.7907;3.46;3.0668;2.8937;2.6264;2.2332;1.9872;1.8315 -;+;-;-;-;-;-;-;-;- + 832 + 1 2.024 90866.6 0.4300000071525574 5565 3606 9169 DOHH2_400M_050219_1,9173 DOHH2_400M_050219_1,9173,AADETLRLW True True AADETLRLW 52.897584 537.781481921673 4819661.5 9169.0 ENSG00000117399|ENST00000310955|CDC20 5.8447004954020185 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9175 52.905 283.0 243270.0 25 0 12935.0 -1 0 91 973.97195700888 1945.92936108456 2 974.4749023318292 MULTI CID FTMS 0 0 0 9174 279440.84375 0.3292628628411606 3 -0.1363105773925781 1 1 [MN][{I|L}P]NNEAQ 9 -1 58.465 0.0 0.0 3.0045 0.0 0.0 0.0 931.4632418144896 931.4632418144896 30.220384319171387 0.0 0.0 0.0 0 0.7302046884880937 1.5228787452803376 0.0 0.7059771852360797 [MN][{I|L}P]NNEAQ 3.0045 - 1238 + 1 2.024 57497.9 1.0 5566 3607 9174 DOHH2_400M_050219_1,9175 DOHH2_400M_050219_1,9175, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9176 52.919 800.0 185890.0 25 0 4454.8 -1 0 142 1193.547820822741 3577.621633068423 3 1194.552539050579 MULTI CID FTMS 0 0 0 9174 254883.78125 0.8117328376320551 -1 0.0566787719726562 2 1 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 17 -1 72.519 0.0 0.0 2.027 0.0 0.0 1572.7431666973398 0.0 1572.7431666973398 0.0 33.30819035401777 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3494850021680094 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.027 - 38438 + 1 2.024 93434.8 0.7699999809265137 5567 3607 9174 DOHH2_400M_050219_1,9176 DOHH2_400M_050219_1,9176, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9178 52.93 394.0 204980.0 25 0 49031.0 + -1 LTRKRCRIELL 11 87 486.62719573623446 1456.8597578089034 3 486.6275207400322 MULTI CID FTMS 0 0 0 9177 176537.640625 0.7945540907681544 -1 0.0216484069824218 1 Carbamidomethyl (C) _LTRKRC(Carbamidomethyl (C))RIELL_ REV__ENST00000591360.1_1_18:56203896-56204202:+|nuORF 0.5059551277355931 0.8727608062196215 1 {I|L} 1 -1 11.259 0.0 0.0 0.77283 0.0 0.0 1325.7648614239408 0.0 1325.7648614239408 0.0 4.1807159868066535 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.77283 + + 15 + 1 2.024 77523.1 1.0 5568 3608 9177 DOHH2_400M_050219_1,9178 DOHH2_400M_050219_1,9178,LTRKRCRIELL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9179 52.939 529.0 125600.0 25 0 47467.0 + 15573 IPYLKLDRRRQ 11 74 729.4375128422143 1456.8604727512286 2 729.4378539919853 MULTI CID FTMS 0 0 0 9177 154392.234375 0.7402515705366015 -1 0.0216484069824218 2 Unmodified _IPYLKLDRRRQ_ REV__ENST00000354050.8_2_20:44527440-44527479:-|nuORF 0.4082653385326392 0.873221713011348 1 {I|L} 1 -1 4.6041 0.0 0.0 0.31603 0.0 0.0 909.6225709951724 431.12283117006695 1340.7454021652393 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.31603 + + 11 + 1 2.024 63665.5 1.0 5569 3608 9177 DOHH2_400M_050219_1,9179 DOHH2_400M_050219_1,9179,IPYLKLDRRRQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9180 52.946 354.0 278170.0 25 0 24286.0 + 7907 ELQEKFLSL 9 126 553.8082412099395 1105.601929486679 2 553.8088867068291 MULTI CID FTMS 0 0 0 9177 146350.984375 0.4924426460959262 -2 0.0783271789550781 3 Unmodified _ELQEKFLSL_ ENSG00000117724|ENST00000366955|CENPF 106.94017166704064 0.0073169432358171 1 {[QN]|[E{I|L}]|[KN]}QE 4 5 42.329 0.0 0.0 3.8286 0.0 0.0 0.0 603.3512987808003 603.3512987808003 3.7488184933343263 0.0 0.0 0.0 0 0.5941876774005248 1.6989700043360187 0.8494850021680094 0.4247425010840047 + {[QN]|[E{I|L}]|[KN]}QE 3.8286 + + 2159 + 1 2.024 79640.7 1.0 5570 3608 9177 DOHH2_400M_050219_1,9180 DOHH2_400M_050219_1,9180,ELQEKFLSL True True ELQEKFLSL 52.945901 553.808886706829 1652968.625 9177.0 ENSG00000117724|ENST00000366955|CENPF 6.634448369344075 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9181 52.958 715.0 167530.0 25 0 16436.0 + 38609 TTEETLTMLY 10 127 601.2862036414456 1200.557854349691 2 601.2861816287041 MULTI CID FTMS 0 0 0 9177 126947.90625 1.0 0 0.0 4 Unmodified _TTEETLTMLY_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 71.13359017698441 0.0189001043006994 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PTT{I|L}TM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 10 5 + 45.512 0.0 0.0 3.7909 3.7909 73.085 0.0 0.0 0.0 6.377528342851761 7.269987279362624 6.377528342851761 2.900439271865487 0 0.0 1.3979400086720375 1.110924374808178 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PTT{I|L}TM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PT{I|L}TTM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};EE{[RE]|[WV]}{I|L}TM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PTTT{I|L}M{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};EE{[RE]|[WV]}T{I|L}M{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ES]|[DT]|[{I|L}C]}P{I|L}ETTM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ES]|[DT]|[{I|L}C]}PET{I|L}TM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ES]|[DT]|[{I|L}C]}P{I|L}TETM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P[R{M(Oxidation (M))|F}]{I|L}M{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ET]|[MV]}TE[VP]TM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3.7909;3.5493;3.2597;2.996;2.4648;2.4183;2.3098;2.3051;2.2422;2.2232 -;-;-;-;-;-;-;-;-;- 2114 1 2.024 88898.2 1.0 5571 3608 9177 DOHH2_400M_050219_1,9181 DOHH2_400M_050219_1,9181,TTEETLTMLY True True TTEETLTMLY 52.958311 601.286181628704 561638.3125 9177.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 6.297200043996175 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9182 52.972 800.0 97274.0 25 0 35372.0 + -1 LFCIARRVKRR 11 86 737.950930265421 1473.887307597642 2 737.9506713747978 MULTI CID FTMS 0 0 0 9177 84138.5 0.8840688090512545 -1 0.0216484069824218 5 Carbamidomethyl (C) _LFC(Carbamidomethyl (C))IARRVKRR_ REV__ENST00000458591.6_2_14:31204849-31204942:+|nuORF 0.3506318815782774 0.8734936314171269 1 Y 1 -1 11.99 0.0 0.0 0.81347 0.0 0.0 1292.8129342839684 0.0 1292.8129342839684 0.0 10.395906230238126 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.81347 - 25 + 1 2.024 72149.4 0.4600000083446502 5572 3608 9177 DOHH2_400M_050219_1,9182 DOHH2_400M_050219_1,9182,LFCIARRVKRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9183 52.986 800.0 87799.0 25 0 3558.6 -1 0 125 909.4464599490166 0 909.4464599490166 PEAK CID FTMS 0 0 0 -1 0 6 1 N{I|L}NAD[YR]{I|L}GA 10 -1 27.331 0.0 0.0 1.5043 0.0 0.0 227.09975475955804 499.19257532291255 726.2923300824706 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 N{I|L}NAD[YR]{I|L}GA 1.5043 - 1662 + 1 2.024 49389.0 0.550000011920929 5573 3608 9177 DOHH2_400M_050219_1,9183 DOHH2_400M_050219_1,9183, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9185 53.001 734.0 143180.0 25 0 23964.0 + 16644 KEKFRRNKQKI 11 114 492.3025757609067 1473.88589788292 3 492.3021728396416 MULTI CID FTMS 0 0 0 9184 114244.71875 1.0 0 0.0 1 Unmodified _KEKFRRNKQKI_ REV__ENSG00000105671|ENST00000247003|DDX49 1.1933415558491238 0.8695176722560516 1 [{I|L}T]{I|L} 3 -1 21.171 0.0 0.0 1.4364 0.0 0.0 0.0 1143.6454553382514 1143.6454553382514 5.686362358410122 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T]{I|L} 1.4364 - 153 1 2.024 95858.0 1.0 5574 3609 9184 DOHH2_400M_050219_1,9185 DOHH2_400M_050219_1,9185,KEKFRRNKQKI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9186 53.006 265.0 286820.0 25 0 15892.0 -1 0 105 888.9130764791852 0 888.9125854372978 PEAK CID FTMS 0 0 0 9184 189665.328125 0.7338831691909092 -2 0.0884208679199218 2 1 Y{M(Oxidation (M))|F}AEQAGAEDK 11 -1 64.635 0.0 0.0 3.6397 0.0 0.0 358.2286118770199 205.0447939508422 563.2734058278621 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.6549471895720984 1.110924374808178 Y{M(Oxidation (M))|F}AEQAGAEDK 3.6397 - 2562 + 1 2.024 54024.3 1.0 5575 3609 9184 DOHH2_400M_050219_1,9186 DOHH2_400M_050219_1,9186, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9187 53.012 317.0 416750.0 25 0 39870.0 + 32948 SELLSDVRF 9 117 533.2818544466932 1064.5491559601862 2 533.2826415896416 MULTI CID FTMS 0 0 0 9184 145721.421875 0.6864860420499219 -2 0.0884208679199218 3 Unmodified _SELLSDVRF_ ENSG00000064726|ENST00000261721|BTBD1;nc|ENSG00000064726|Q9H0C5-2|BTBD1 51.629811660486645 0.0367964933207742 1 {[ES]|[DT]|[{I|L}C]}{I|L}{I|L}SDVR{M(Oxidation (M))|F} 9 0 + 53.479 0.0 0.0 5.0236 5.0236 81.193 0.0 0.0 0.0 7.147642715192504 6.575773191777934 6.575773191777934 6.575773191777934 0 1.0 0.0 0.7059771852360797 0.0 + + {[ES]|[DT]|[{I|L}C]}{I|L}{I|L}SDVR{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}SD{M(Oxidation (M))|F}[RV];{[TV]|[{I|L}S]}E{I|L}SDVR{M(Oxidation (M))|F};{[TV]|[{I|L}S]}E{I|L}SD{M(Oxidation (M))|F}[RV];{[ES]|[DT]|[{I|L}C]}{I|L}{[DS]|[MA]|[CV]|TT}{I|L}VR{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}{[DS]|[MA]|[CV]|TT}{I|L}{M(Oxidation (M))|F}[RV];{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}W{I|L}{[SA]|[TG]}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}E{[DS]|[MA]|[CV]|TT}{I|L}VR{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}][PG];{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}[PA]VR{M(Oxidation (M))|F} 5.0236;4.4059;4.2711;3.6534;3.5222;2.9045;2.7711;2.7698;2.6643;2.5991 +;-;-;-;-;-;-;-;-;- + 761 + 1 2.024 105782.6 1.0 5576 3609 9184 DOHH2_400M_050219_1,9187 DOHH2_400M_050219_1,9187,SELLSDVRF True True SELLSDVRF 53.011984 533.282641589642 1243019.5 9184.0 nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1 5.438645044962565 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9188 53.022 552.0 183820.0 25 0 50879.0 + 23493 LTIRQFYKKV 10 90 648.3927634539767 1294.7709739747534 2 648.3940307497978 MULTI CID FTMS 0 0 0 9184 131453.5 0.4434393719486946 -4 0.1839675903320312 4 Unmodified _LTIRQFYKKV_ REV__ENSG00000137080|ENST00000380225|IFNA21;REV__ENSG00000228083|ENST00000380222|IFNA14 1.4819007175156935 0.719781833666733 1 Y 1 -1 11.259 0.0 0.0 0.86958 0.0 0.0 1113.6965854022908 0.0 1113.6965854022908 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.86958 + + 10 + 1 2.024 102513.7 1.0 5577 3609 9184 DOHH2_400M_050219_1,9188 DOHH2_400M_050219_1,9188,LTIRQFYKKV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9189 53.034 704.0 233590.0 25 0 34243.0 17138 KLHSQLRTTVL 11 129 432.5976628314596 1294.771159094579 3 432.5973388552666 MULTI CID FTMS 0 0 0 9184 122769.5546875 0.5278684739251264 -4 0.1839675903320312 5 Unmodified _KLHSQLRTTVL_ ENSG00000132613|ENST00000338779|MTSS2;nc|ENSG00000132613|Q765P7-2|MTSS2 1.3295316138638542 0.8688751186870782 1 P 1 11 9.2694 0.0 0.0 0.71591 0.0 0.0 1179.707306715964 0.0 1179.707306715964 0.0 1.2416182257398931 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.71591 - 13 + 1 2.024 148738.6 1.0 5578 3609 9184 DOHH2_400M_050219_1,9189 DOHH2_400M_050219_1,9189,KLHSQLRTTVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9191 53.042 212.0 320750.0 25 0 23932.0 -1 0 87 902.9104188740472 1803.806284814894 2 902.9110595583916 MULTI CID FTMS 0 0 0 9190 146226.125 0.3785922886444628 3 -0.0903968811035156 1 1 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}Y 12 -1 85.298 0.0 0.0 4.7288 0.0 0.0 0.0 355.1992523066837 355.1992523066837 66.08984766782103 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 1.0629529932484498 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}Y 4.7288 - 1359 1 2.044 50857.6 1.0 5579 3610 9190 DOHH2_400M_050219_1,9191 DOHH2_400M_050219_1,9191, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9192 53.056 800.0 102040.0 25 0 16935.0 + 9777 FNILIDVIFMI 11 101 669.3807316284326 1336.7469103236651 2 669.3822509646416 MULTI CID FTMS 0 0 0 9190 17459.58203125 0.2011645134091733 1 -0.0355949401855468 2 Unmodified _FNILIDVIFMI_ REV__ENSG00000055118|ENST00000262186|KCNH2;REV__ENST00000461280.1_1_7:150646989-150652738:-|nuORF;REV__ENST00000473610.5_1_7:150648470-150652738:-|nuORF;REV__nc|ENSG00000055118|Q12809-2|KCNH2;REV__nc|ENSG00000055118|Q12809-4|KCNH2;REV__nc|ENSG00000055118|Q12809-5|KCNH2;REV__nc|ENSG00000055118|Q12809-6|KCNH2;REV__nc|ENSG00000055118|Q12809-7|KCNH2 8.745405648335112 0.8338865417133445 1 {I|L}{I|L}C{I|L} 4 -1 19.385 0.0 0.0 1.4502 0.0 0.0 0.0 891.4649638727464 891.4649638727464 1.8054827045996724 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {I|L}{I|L}C{I|L} 1.4502 - 93 1 2.044 67779.5 0.4199999868869781 5580 3610 9190 DOHH2_400M_050219_1,9192 DOHH2_400M_050219_1,9192,FNILIDVIFMI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9193 53.069 800.0 260530.0 25 0 45450.0 + 2750 ATLHKRKFRR 10 154 656.9057591969337 1311.7969654606673 2 656.9061767458916 MULTI CID FTMS 0 0 0 9190 121782.3125 0.6558111818785655 -5 0.2318572998046875 3 Unmodified _ATLHKRKFRR_ REV__ENSG00000134452|ENST00000362091|FBH1;REV__nc|ENSG00000134452|Q8NFZ0-2|FBH1 3.944395688203298 0.708391353636983 1 [TA]D{I|L}YYGE{I|L} 9 -1 34.592 0.0 0.0 2.637 0.0 0.0 0.0 283.3150068027173 283.3150068027173 14.158869370877916 0.0 0.0 0.0 0 0.0 1.154901959985743 1.1237125054200234 0.0 [TA]D{I|L}YYGE{I|L} 2.637 - 981 1 2.044 174396.9 0.4900000095367431 5581 3610 9190 DOHH2_400M_050219_1,9193 DOHH2_400M_050219_1,9193,ATLHKRKFRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9195 53.074 11.0 8013000.0 25 0 547570.0 304 ADTTLDESIY 10 82 564.2585902051512 1126.5026274771024 2 564.2596313357353 MULTI CID FTMS 0 0 0 9194 5393737.0 0.6590605046188721 2 -0.0548019409179687 1 Unmodified _ADTTLDESIY_ ENSG00000183813|ENST00000330953|CCR4 20.453626601364224 0.5043500229302764 1 [TA]D{I|L} 4 6 41.515 0.0 0.0 3.6853 0.0 0.0 0.0 723.2824180867304 723.2824180867304 14.943415770716156 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 1.079689690656103 0.0 [TA]D{I|L} 3.6853 - 178 1 2.044 66623.7 1.0 5582 3611 9194 DOHH2_400M_050219_1,9195 DOHH2_400M_050219_1,9195,ADTTLDESIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9196 53.079 231.0 361020.0 25 0 20663.0 -1 0 84 966.9639424445278 1931.913331955856 2 967.4647094607352 MULTI CID FTMS 0 0 0 9194 270056.78125 0.1264929617954476 6 -0.1133193969726562 2 1 [NP]{I|L}DA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RH]DAD{I|L}NP[EP] 17 -1 + 76.835 0.0 0.0 3.9772 3.9772 72.97 0.0 0.0 0.0 13.935752032695872 7.695510786217255 7.695510786217255 2.333757581210648 0 0.0 1.3979400086720375 0.3807196863200844 0.9291746928241126 [NP]{I|L}DA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RH]DAD{I|L}NP[EP];[NP]{I|L}DAN{[RE]|[WV]}N[PG]AD{I|L}NP[EP];[NP]{I|L}NM{[TV]|[{I|L}S]}[RH]DAD{I|L}NP[EP];[NP]{I|L}DAN{[RE]|[WV]}GG[PG]AD{I|L}NP[EP];[NP]{I|L}DAN{[RE]|[WV]}G[NP]AD{I|L}NP[EP];[NP]{I|L}W{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RH]DAD{I|L}NP[EP];[NP]{I|L}DA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RH]WD{I|L}NP[EP];[NP]{I|L}N{M(Oxidation (M))|F}[{I|L}A][RH]DAD{I|L}NP[EP];[NP]{I|L}DAN{[RE]|[WV]}N[QP]D{I|L}NP[EP];[NP]{I|L}WN{[RE]|[WV]}N[PG]AD{I|L}NP[EP] 3.9772;3.8564;3.8213;3.8032;3.7652;3.629;3.629;3.5744;3.5074;3.5074 -;-;-;-;-;-;-;-;-;- 7549 1 2.044 61966.9 1.0 5583 3611 9194 DOHH2_400M_050219_1,9196 DOHH2_400M_050219_1,9196, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9197 53.093 800.0 129630.0 25 0 28685.0 + 43333 WLTGRSLIKKK 11 95 665.4192518876578 1328.8239508421154 2 665.4196655154228 MULTI CID FTMS 0 0 0 9194 158303.734375 1.0 0 0.0 3 Unmodified _WLTGRSLIKKK_ REV__ENSG00000185958|ENST00000327337|FAM186A 1.4819007175156935 0.86815623132643 1 [W{I|L}]EA{M(Oxidation (M))|F} 5 -1 32.236 0.0 0.0 2.4259 0.0 0.0 0.0 679.4912838768842 679.4912838768842 20.97677438916211 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3054621874040891 0.0 [W{I|L}]EA{M(Oxidation (M))|F} 2.4259 - 70 1 2.044 92127.4 0.550000011920929 5584 3611 9194 DOHH2_400M_050219_1,9197 DOHH2_400M_050219_1,9197,WLTGRSLIKKK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9198 53.106 800.0 247920.0 25 0 20692.0 -1 0 132 1159.286073243744 4633.115187108576 4 1159.790576159954 MULTI CID FTMS 0 0 0 9194 163749.265625 0.701626549024969 -4 0.171905517578125 4 1 EY{M(Oxidation (M))|F}ANQQAE 9 -1 27.133 0.0 0.0 0.58564 0.0 0.0 3101.462502849025 448.15949426822505 3549.62199711725 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.25 EY{M(Oxidation (M))|F}ANQQAE 0.58564 - 1290 + 1 2.044 111935.2 0.75 5585 3611 9194 DOHH2_400M_050219_1,9198 DOHH2_400M_050219_1,9198, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9199 53.12 800.0 76902.0 25 0 1297.4 -1 0 79 1061.347338855267 0 1061.347338855267 PEAK CID FTMS 0 0 0 -1 0 5 1 Y 1 -1 3.4949 0.0 0.0 0.1648 0.0 0.0 1060.1997303454966 894.3717135065061 1954.5714438520024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.1648 - 5 + 1 2.044 40287.6 0.5799999833106995 5586 3611 9194 DOHH2_400M_050219_1,9199 DOHH2_400M_050219_1,9199, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9202 53.14 731.0 294280.0 25 0 71991.0 + 7762 ELFLRRISL 9 118 573.8531515415989 1145.6917501499977 2 573.8531371951103 MULTI CID FTMS 0 0 0 9201 94392.0234375 0.8123160810720047 1 -0.0204505920410156 1 Unmodified _ELFLRRISL_ ENSG00000111361|ENST00000424014|EIF2B1;ENST00000452159.6_1_12:124114706-124118224:-|nuORF;nc|ENSG00000111361|Q14232-2|EIF2B1 64.9267550582149 0.0233543250187123 1 {I|L}E{M(Oxidation (M))|F}[R{I|L}]R{I|L}S{I|L} 9 2 + 61.309 0.0 0.0 5.3512 5.3512 82.528 0.0 0.0 0.0 44.2192544342064 10.48459416246029 10.48459416246029 6.817496819840656 0 1.579689690656103 2.0 0.6109243748081782 0.5 {I|L}E{M(Oxidation (M))|F}[R{I|L}]R{I|L}S{I|L};E{I|L}{M(Oxidation (M))|F}[R{I|L}]R{I|L}S{I|L} 5.3512;4.7562 -;+ + 109 + 1 2.084 161953.1 1.0 5587 3613 9201 DOHH2_400M_050219_1,9202 DOHH2_400M_050219_1,9202,ELFLRRISL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9203 53.145 284.0 421630.0 25 0 56575.0 2666 ATDPNSEWKEH 11 115 657.2906001535164 1312.566647373833 2 657.2919799685478 MULTI CID FTMS 0 0 0 9201 159801.875 0.7164329745279515 -1 0.0040626525878906 2 Unmodified _ATDPNSEWKEH_ ENSG00000107021|ENST00000372648|TBC1D13;nc|ENSG00000107021|Q9NVG8-3|TBC1D13 13.042465956692816 0.7638483625850725 1 [TA]D{I|L} 4 8 30.247 0.0 0.0 2.3044 0.0 0.0 0.0 909.347475581117 909.347475581117 11.319006879220057 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.75 0.0 [TA]D{I|L} 2.3044 - 591 1 2.084 104151.4 1.0 5588 3613 9201 DOHH2_400M_050219_1,9203 DOHH2_400M_050219_1,9203,ATDPNSEWKEH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9206 53.165 800.0 100460.0 25 0 14336.0 -1 0 113 502.3584319462647 501.3511554796647 1 502.3582946658134 MULTI CID FTMS 0 0 0 9205 104836.9453125 0.4301949037637701 27 -1.1624908447265625 1 1 P 1 -1 10.713 0.0 0.0 2.1369 0.0 0.0 386.28740991257325 0.0 386.28740991257325 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.1369 - 7 + 1 2.084 73271.5 0.4399999976158142 5589 3615 9205 DOHH2_400M_050219_1,9206 DOHH2_400M_050219_1,9206, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9207 53.179 800.0 285170.0 25 0 33660.0 + 9167 FGGVLILIHR 10 168 375.569541503551 1123.6867951108532 3 375.5692932009697 MULTI CID FTMS 0 0 0 9205 102237.453125 0.0063283764639068 -10 0.3467216491699219 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 1 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 95.836 0.0 0.0 8.5287 8.5287 93.275 0.0 0.0 0.0 79.63789404319101 22.400834521225903 22.400834521225903 9.208187539523747 0 1.086696871556164 2.0 0.0 1.2115462839138678 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 8.5287;7.7092 -;- 214 + 1 2.084 183242.5 0.4399999976158142 5590 3615 9205 DOHH2_400M_050219_1,9207 DOHH2_400M_050219_1,9207,FGGVLILIHR False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9210 53.199 800.0 216010.0 25 0 22712.0 28768 PYACTDLAVY 10 164 558.2587344377769 1114.5029159423536 2 558.2592651247978 MULTI CID FTMS 0 0 0 9209 81997.1875 0.1260436546804198 -5 0.0625801086425781 1 Unmodified _PYACTDLAVY_ ENSG00000181240|ENST00000321510|SLC25A41 26.88365393820708 0.3646707531412818 1 [{I|L}A]DTPA{[YC]|[HE]}[YV] 10 7 + 30.435 0.0 0.0 2.7308 2.7308 68.555 0.0 0.0 0.0 1.1595182634468415 -0.5611356871814444 -0.5611356871814444 1.415502443196775 0 0.4247425010840047 1.6989700043360187 0.8494850021680094 0.0 [{I|L}A]DTPA{[YC]|[HE]}[YV];[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]DVEA{I|L}[YV];[{I|L}A]DTP[YC(Carbamidomethyl (C))]{I|L}Y;[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]DVEAV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}ATPA{[YC]|[HE]}[YV];[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]D{I|L}DA{I|L}[YV];[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]DD{I|L}A{I|L}[YV];[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]DVEVA{I|L}Y;[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]D{I|L}DAV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}ATP[YC(Carbamidomethyl (C))]{I|L}Y 2.7308;2.6038;2.5168;2.442;2.3027;2.2878;2.2468;2.1679;2.126;2.0887 -;-;-;-;-;-;-;-;-;- 1565 1 2.084 136516.0 0.4199999868869781 5591 3617 9209 DOHH2_400M_050219_1,9210 DOHH2_400M_050219_1,9210,PYACTDLAVY False True QEWDGLVRI 53.199191 558.259265124798 186087.71875 9209.0 ENST00000509182.1_1_5:61688751-61699599:-|nuORF;;ENSG00000086189|ENST00000199320|DIMT1 0.9687226712703704 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9211 53.213 800.0 130550.0 25 0 2504.8 -1 0 101 1164.86970567917 0 1164.868457019329 PEAK CID FTMS 0 0 0 9209 98084.671875 0.90739376092428 -4 0.0585174560546875 2 1 {I|L}VKY{M(Oxidation (M))|F}ADQQAE 11 -1 55.937 0.0 0.0 2.4031 0.0 0.0 583.9066954386152 448.1591280572876 1032.0658234959028 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VKY{M(Oxidation (M))|F}ADQQAE 2.4031 - 766 + 1 2.084 61207.9 0.5299999713897705 5592 3617 9209 DOHH2_400M_050219_1,9211 DOHH2_400M_050219_1,9211, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9214 53.233 800.0 231680.0 25 0 17358.0 + 19134 ELDPLTGEWHY 11 151 680.3182126317234 1358.6218723302468 2 680.3195678591728 MULTI CID FTMS 0 0 0 9213 157025.671875 0.9460037640050007 -2 0.0342864990234375 1 Unmodified _LEACLWEFVSY_ ENSG00000091039|ENST00000261183|OSBPL8;nc|ENSG00000091039|Q9BZF1-2|OSBPL8;nc|ENSG00000091039|Q9BZF1-3|OSBPL8 17.11289562659939 0.6791789249425932 1 {[QN]|[E{I|L}]|[KN]}DP{I|L}TWWHY 10 7 + 71.151 0.0 0.0 5.237 5.237 82.416 0.0 0.0 0.0 13.476277995878547 8.247490543075173 8.247490543075173 7.112496903393861 0 0.0 1.3979400086720375 0.3807196863200844 0.0 {[QN]|[E{I|L}]|[KN]}DP{I|L}TWWHY;{[QN]|[E{I|L}]|[KN]}DP{I|L}TPA{M(Oxidation (M))|F}GHY;{[QN]|[E{I|L}]|[KN]}DP{I|L}TP{I|L}DD[MT];{[QN]|[E{I|L}]|[KN]}DP{I|L}T{[DA]|[EG]}WHY;{[QN]|[E{I|L}]|[KN]}DP{I|L}TWWNW;{[QN]|[E{I|L}]|[KN]}DP[HS]{[{M(Oxidation (M))|F}H]|[RQ]}KSY;{[QN]|[E{I|L}]|[KN]}DP{I|L}TPA{M(Oxidation (M))|F}GNW;{[QN]|[E{I|L}]|[KN]}D[HT]AQQPASY;{[QN]|[E{I|L}]|[KN]}[HT]STWWHY;{[QN]|[E{I|L}]|[KN]}DP{I|L}TWWGGW 5.237;4.7135;4.63;4.5625;4.2211;3.7908;3.6976;3.5981;3.5767;3.5466 -;-;-;-;-;-;-;-;-;- 6136 + 1 2.105 136694.2 0.4799999892711639 5593 3619 9213 DOHH2_400M_050219_1,9214 DOHH2_400M_050219_1,9214,LEACLWEFVSY False True ELDPLTGEWHY 53.23348 680.319567859173 1136885.625 9213.0 ENSG00000091039|ENST00000261183|OSBPL8;;nc|ENSG00000091039|Q9BZF1-2|OSBPL8;;nc|ENSG00000091039|Q9BZF1-3|OSBPL8 8.097404797871908 2.0 False 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9215 53.239 287.0 198910.0 25 0 3305.1 -1 0 74 1156.573779284954 0 1156.573779284954 PEAK CID FTMS 0 0 0 -1 0 2 1 A 1 -1 3.9794 0.0 0.0 0.17218 0.0 0.0 1905.26573986698 331.8078707330688 2237.073610600049 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.17218 - 4 + 1 2.105 42010.8 1.0 5594 3619 9213 DOHH2_400M_050219_1,9215 DOHH2_400M_050219_1,9215, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9217 53.25 465.0 121090.0 25 0 11651.0 + 29053 QEIPEPLQL 9 80 1066.5790035910206 1065.5717271244207 1 1067.529345691204 MULTI CID FTMS 0 0 0 9216 43906.70703125 0.4865557475401054 3 -0.168975830078125 1 Unmodified _QEIPEPLQL_ ENSG00000155561|ENST00000285968|NUP205 8.155526934196011 0.6299788542272896 1 {M(Oxidation (M))|F} 1 9 7.7866 0.0 0.0 0.73074 0.0 0.0 223.1156857199269 692.3637789361936 915.4794646561206 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.73074 - 38 + 1 2.105 42907.7 1.0 5595 3620 9216 DOHH2_400M_050219_1,9217 DOHH2_400M_050219_1,9217,QEIPEPLQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9218 53.263 800.0 96932.0 25 0 5165.3 -1 0 114 914.9310627244804 1827.8475725157607 2 915.429736316204 MULTI CID FTMS 0 0 0 9216 80582.7109375 0.8339815444582113 3 -0.168975830078125 2 1 {M(Oxidation (M))|F}ANEQA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 11 -1 41.702 0.0 0.0 2.2815 0.0 0.0 521.2986966386107 0.0 521.2986966386107 0.0 35.17906434189573 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}ANEQA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 2.2815 - 941 + 1 2.105 54069.9 0.5199999809265137 5596 3620 9216 DOHH2_400M_050219_1,9218 DOHH2_400M_050219_1,9218, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9219 53.277 800.0 119890.0 25 0 17114.0 + -1 VASEYPVIL 9 103 990.5550015348404 0 990.5525390505792 PEAK CID FTMS 0 0 0 9216 104222.421875 0.9330542475693184 3 -0.168975830078125 3 ENSG00000124181|ENST00000685551|PLCG1;nc|ENSG00000124181|P19174|PLCG1 1 {I|L}VPYES 6 -1 40.526 0.0 0.0 2.0477 0.0 0.0 1120.6471472004134 167.0825594537719 1287.7297066541853 0.0 0.0 0.0 0.0 0 0.0 0.0 1.892159058960253 0.0 {I|L}VPYES 2.0477 - 854 + 1 2.105 68314.0 0.5799999833106995 5597 3620 9216 DOHH2_400M_050219_1,9219 DOHH2_400M_050219_1,9219, False False VASEYPVIL 53.277338 990.552539050579 1332349.125 9216.0 ENSG00000124181|ENST00000685551|PLCG1;;nc|ENSG00000124181|P19174|PLCG1 4.515412966410319 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9220 53.291 800.0 80218.0 25 0 2464.7 -1 0 95 1194.5511146906283 0 1194.886157214642 PEAK CID FTMS 0 0 0 9216 46548.35546875 0.5224099095149581 -1 0.021697998046875 4 1 PPPP 4 -1 23.928 0.0 0.0 1.0024 0.0 0.0 1544.6566785657549 451.19465051822505 1995.85132908398 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 PPPP 1.0024 - 39 + 1 2.105 42731.9 0.550000011920929 5598 3620 9216 DOHH2_400M_050219_1,9220 DOHH2_400M_050219_1,9220, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9222 53.308 757.0 116270.0 25 0 20716.0 + 23879 LVLGWPWLRR 10 81 648.3927634539767 1294.7709739747534 2 648.3934203982353 MULTI CID FTMS 0 0 0 9221 71046.9140625 0.2396664900574567 8 -0.6508255004882812 1 Unmodified _LVLGWPWLRR_ REV__ENST00000302188.7_1_2:28113810-28113921:-|nuORF 1.4819007175156935 0.719781833666733 1 Y 1 -1 11.783 0.0 0.0 0.91002 0.0 0.0 1113.6959445331502 0.0 1113.6959445331502 0.0 6.29818655252878 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.91002 - 7 + 1 2.126 78477.8 1.0 5599 3621 9221 DOHH2_400M_050219_1,9222 DOHH2_400M_050219_1,9222,LVLGWPWLRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9223 53.314 322.0 422820.0 25 0 30413.0 + -1 MNWRYCRLWCL 11 132 837.3814141995856 1672.7482754659711 2 837.3828613162041 MULTI CID FTMS 0 0 0 9221 164141.984375 0.4556691188590365 -2 0.0741004943847656 2 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))NWRYC(Carbamidomethyl (C))RLWC(Carbamidomethyl (C))L_ REV__ENST00000584052.5_1_18:21043977-21044085:+|nuORF 1.4819007175156935 0.86815623132643 1 DEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 12 -1 86.129 0.0 0.0 5.149 0.0 0.0 248.09126479316564 0.0 248.09126479316564 0.0 61.22969899176047 0.0 0.0 0 1.0941876774005248 0.0 0.3807196863200844 1.2302046884880935 DEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 5.149 - 1078 1 2.126 96471.7 1.0 5600 3621 9221 DOHH2_400M_050219_1,9223 DOHH2_400M_050219_1,9223,MNWRYCRLWCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9224 53.328 800.0 222290.0 25 0 33893.0 + 30432 RDEGISALW 9 114 523.766770519226 1045.518988105252 2 523.7673217654228 MULTI CID FTMS 0 0 0 9221 111279.953125 1.0 0 0.0 3 Unmodified _RDEGISALW_ ENSG00000100372|ENST00000435456|SLC25A17;ENST00000447566.5_1_22:41166840-41215302:-|nuORF 40.23920728925047 0.0741434193262949 1 [RD]EG{I|L}SA{I|L}W 9 0 + 62.858 0.0 0.0 6.0122 6.0122 90.998 0.0 0.0 0.0 7.816658315635081 42.61561899423568 7.816658315635081 16.250612633917 0 0.9247425010840048 0.0 0.8494850021680094 0.3054621874040891 + + [RD]EG{I|L}SA{I|L}W;[MT]{I|L}AS[QP]W{I|L};{[CP]|[EA]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}SA{I|L}W;[MT]{I|L}AS[QP]{I|L}W;[WE]AA{I|L}SA{I|L}W;{[TV]|[{I|L}S]}A[RD]DA{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[QP]DA{I|L}W;{[MS]|[{M(Oxidation (M))|F}A]}PAA{I|L}SA{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[QP]DA{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}AS{I|L}[YE]{M(Oxidation (M))|F} 6.0122;4.4579;4.1547;4.0761;3.9266;3.7588;3.6698;3.5949;3.4526;3.3684 +;-;-;-;-;-;-;-;-;- + 324 1 2.126 135629.2 0.8999999761581421 5601 3621 9221 DOHH2_400M_050219_1,9224 DOHH2_400M_050219_1,9224,RDEGISALW True True RDEGISALW 53.327897 523.767321765423 663428.25 9221.0 ENSG00000100372|ENST00000435456|SLC25A17;;ENST00000447566.5_1_22:41166840-41215302:-|nuORF 6.2870833079020185 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9225 53.339 640.0 192880.0 25 0 23165.0 + 15931 ISYGPDWKDFY 11 128 695.8194656871033 1389.6243784410065 2 695.8204223513603 MULTI CID FTMS 0 0 0 9221 103616.0390625 1.0 0 0.0 4 Unmodified _ISYGPDWKDFY_ ENSG00000213614|ENST00000268097|HEXA;ENST00000566672.5_1_15:72638574-72647950:-|nuORF 74.7717668357584 0.0185759530880285 1 {I|L}SYGP{[CA]|SS}DKHHY 12 5 + 88.404 0.0 0.0 6.3617 6.3617 83.487 0.0 0.0 0.0 31.210575561501507 0.7436204510705551 0.7436204510705551 3.807196863200844 0 1.0941876774005248 1.5228787452803376 0.7614393726401688 0.3807196863200844 {I|L}SYGP{[CA]|SS}DKHHY;{I|L}SYGPD{[CA]|SS}KHHY;{I|L}SYGAAEDKHHY;{I|L}SYGP{[CA]|SS}GDPW[QP];{I|L}SYG[RD]GDPW[QP];{I|L}SYGP{[C(Carbamidomethyl (C))E]|[WC]}KHHY;{I|L}SYGAAEGDPW[QP];{I|L}SYGP{[CA]|SS}DGPW[QP];{I|L}SYGPDWAAW[QP];{I|L}SYHT{M(Oxidation (M))|F}[VS]HHY 6.3617;6.0878;6.0184;5.9063;5.645;5.612;5.563;5.3115;5.2769;5.2221 -;-;-;-;-;-;-;-;-;- 16645 + 1 2.126 98081.9 1.0 5602 3621 9221 DOHH2_400M_050219_1,9225 DOHH2_400M_050219_1,9225,ISYGPDWKDFY True True ISYGPDWKDFY 53.339055 695.82042235136 744888.5 9221.0 ENST00000566672.5_1_15:72638574-72647950:-|nuORF;;ENSG00000213614|ENST00000268097|HEXA 7.874349912007649 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9227 53.346 229.0 521480.0 25 0 32083.0 + -1 TAEVLFDMW 9 110 564.2585902051512 1126.5026274771024 2 564.2594482302666 MULTI CID FTMS 0 0 0 9226 246376.0 0.0301046734177026 13 -0.8207054138183594 1 Oxidation (M) _TAEVLFDM(Oxidation (M))W_ REV__ENSG00000197442|ENST00000359015|MAP3K5 23.1484247019978 0.2366544122328345 1 [TA]D{I|L}{[ES]|[DT]|[{I|L}C]}{[ES]|[DT]|[{I|L}C]}{I|L}Y 10 -1 + 42.127 0.0 0.0 3.7396 3.7396 74.716 0.0 0.0 0.0 15.893170903024725 6.152340397648857 6.152340397648857 4.1072813928388285 0 1.218765315847925 1.6989700043360187 1.5044321917401078 0.0 [TA]D{I|L}{[ES]|[DT]|[{I|L}C]}{[ES]|[DT]|[{I|L}C]}{I|L}Y;[TA][{M(Oxidation (M))|F}E]PA{[ES]|[DT]|[{I|L}C]}{I|L}Y;[MT]{I|L}CPA{[ES]|[DT]|[{I|L}C]}{I|L}Y;[PG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PA{[ES]|[DT]|[{I|L}C]}{I|L}Y;{[ES]|[DT]|[{I|L}C]}A{I|L}{[ES]|[DT]|[{I|L}C]}{[ES]|[DT]|[{I|L}C]}{I|L}Y;[TA]EE{[C(Carbamidomethyl (C))E]|[WC]}{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}[WM]A{[ES]|[DT]|[{I|L}C]}{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[ES]|[DT]|[{I|L}C]}{I|L}A{[ES]|[DT]|[{I|L}C]}{I|L}Y;[PG]D{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ES]|[DT]|[{I|L}C]}{I|L}Y;[MT]{[CP]|[EA]}{I|L}A{[ES]|[DT]|[{I|L}C]}{I|L}Y 3.7396;3.375;2.3287;2.2216;2.1154;1.9832;1.9386;1.7859;1.6871;1.5011 -;-;-;-;-;-;-;-;-;- 403 1 2.126 92035.3 1.0 5603 3622 9226 DOHH2_400M_050219_1,9227 DOHH2_400M_050219_1,9227,TAEVLFDMW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9228 53.351 250.0 104370.0 25 0 8025.9 -1 0 45 966.9639424445278 1931.913331955856 2 967.4592162966728 MULTI CID FTMS 0 0 0 9226 139418.828125 0.0653029352492207 17 -0.9149818420410156 2 1 [MN]P 3 -1 17.932 0.0 0.0 0.92819 0.0 0.0 0.0 1586.7531811592337 1586.7531811592337 1.9458304218226663 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [MN]P 0.92819 - 66 1 2.126 29041.4 1.0 5604 3622 9226 DOHH2_400M_050219_1,9228 DOHH2_400M_050219_1,9228, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9229 53.352 56.0 1309300.0 25 0 116610.0 -1 0 71 902.4173484618756 1802.8201439905508 2 902.9192993044852 MULTI CID FTMS 0 0 0 9226 768154.1875 0.3714506054747261 -2 0.100250244140625 3 1 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F} 11 -1 87.371 0.0 0.0 4.8463 0.0 0.0 0.0 518.2622872662383 518.2622872662383 67.19328900902144 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 1.5669015600442575 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F} 4.8463 - 1282 1 2.126 54266.5 1.0 5605 3622 9226 DOHH2_400M_050219_1,9229 DOHH2_400M_050219_1,9229, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9230 53.365 769.0 284540.0 25 0 32936.0 + 2508 ARNDYLLTL 9 139 539.797976706468 1077.581400479736 2 539.7986328005791 MULTI CID FTMS 0 0 0 9226 136128.125 0.5820071852722428 -1 0.0478477478027343 4 Unmodified _ARNDYLLTL_ ENSG00000137478|ENST00000409418|FCHSD2;nc|ENSG00000137478|O94868-2|FCHSD2;nc|ENSG00000137478|O94868-3|FCHSD2 75.76082778847304 0.0188720312721366 1 {[QV]|[N{I|L}]|[RA]|[KV]}NDY{I|L}{I|L}T{I|L} 9 0 + 66.888 0.0 0.0 6.2072 6.2072 89.429 0.0 0.0 0.0 5.826053680547794 32.16080116514486 5.826053680547794 9.208187539523756 0 0.9247425010840048 0.0 0.7302046884880937 1.1956290139465235 + + {[QV]|[N{I|L}]|[RA]|[KV]}NDY{I|L}{I|L}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}GGDY{I|L}{I|L}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NDY{I|L}T{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}R[NG]Y{I|L}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}ND{I|L}Y{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[WY]{I|L}E{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NDYT{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[WY]{I|L}{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}GGDY{I|L}T{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[WY]E{I|L}{I|L}{I|L} 6.2072;5.3527;5.3413;5.0923;4.9222;4.6693;4.5967;4.5084;4.4867;4.2514 +;-;-;-;-;-;-;-;-;- + 1334 1 2.126 171662.0 1.0 5606 3622 9226 DOHH2_400M_050219_1,9230 DOHH2_400M_050219_1,9230,ARNDYLLTL True True ARNDYLLTL 53.365361 539.798632800579 1290306.0 9226.0 nc|ENSG00000137478|O94868-3|FCHSD2;;nc|ENSG00000137478|O94868-2|FCHSD2;;ENSG00000137478|ENST00000409418|FCHSD2 4.795062939325969 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9231 53.379 800.0 169700.0 25 0 14144.0 + 846 AETPDIKLF 9 134 517.2814513798171 1032.548349826434 2 517.2819091677666 MULTI CID FTMS 0 0 0 9226 114989.5 0.0015757624508933 35 -1.5354995727539062 5 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 43.9818466556824 0.0535980856389242 1 {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F} 9 0 + 61.586 0.0 0.0 5.9645 5.9645 85.447 0.0 0.0 0.0 12.997909235484322 7.323937598229691 7.323937598229691 7.323937598229691 0 0.8807196863200843 0.585026652029182 0.4247425010840047 0.3807196863200844 + + {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}TPD{I|L}K{M(Oxidation (M))|F}{I|L};[DP]{I|L}K{I|L}T{M(Oxidation (M))|F}{[CP]|[EA]};{[CP]|[EA]}TPR{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L};[DP]{I|L}{I|L}KT{M(Oxidation (M))|F}{[CP]|[EA]};[DP]{I|L}KT{I|L}{M(Oxidation (M))|F}{[CP]|[EA]};[DP]{I|L}TK{I|L}{M(Oxidation (M))|F}{[CP]|[EA]};[DP]T{I|L}K{I|L}{M(Oxidation (M))|F}{[CP]|[EA]};[TP][RV]{I|L}T{M(Oxidation (M))|F}{[CP]|[EA]};{[CP]|[EA]}T[{I|L}T]W{[TV]|[{I|L}S]}{I|L} 5.9645;5.2552;4.3835;3.5078;3.4009;3.1704;2.5194;2.47;2.3124;2.2997 +;-;-;-;-;-;-;-;-;- + 432 + 1 2.126 105634.7 0.9100000262260436 5607 3622 9226 DOHH2_400M_050219_1,9231 DOHH2_400M_050219_1,9231,AETPDIKLF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9232 53.39 640.0 152560.0 25 0 17861.0 + 439 AEFAATLPLM 10 132 532.2760915146836 1062.537630096167 2 532.2767822146416 MULTI CID FTMS 0 0 0 9226 90167.515625 1.0 0 0.0 6 Unmodified _AEFAATLPLM_ REV__ENSG00000130227|ENST00000252512|XPO7 43.85829265575387 0.1168243637355526 1 TP{I|L}{I|L}M 5 -1 51.696 0.0 0.0 4.8653 0.0 0.0 489.21666152168126 0.0 489.21666152168126 0.0 36.2113751626007 0.0 0.0 0 1.325257498915995 0.0 0.8494850021680094 0.0 TP{I|L}{I|L}M 4.8653 - 878 1 2.126 79483.9 1.0 5608 3622 9226 DOHH2_400M_050219_1,9232 DOHH2_400M_050219_1,9232,AEFAATLPLM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9233 53.394 183.0 302150.0 25 0 36637.0 + -1 MCIETAVLY 9 76 1115.512837208058 1114.505560741458 1 1115.509448230267 MULTI CID FTMS 0 0 0 9226 125218.0625 0.2213488644083545 -3 0.1219482421875 7 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))IETAVLY_ REV__ENSG00000138670|ENST00000264400|RASGEF1B;REV__ENSG00000146090|ENST00000361132|RASGEF1C;REV__nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;REV__nc|ENSG00000138670|Q0VAM2-3|RASGEF1B;REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C 15.847184025352805 0.4077185912009129 1 SEA{I|L}VY 6 -1 39.716 0.0 0.0 3.5636 0.0 0.0 434.1645985334 0.0 434.1645985334 0.0 23.91949716988933 0.0 0.0 0 0.0 0.0 0.785666875892183 0.0 SEA{I|L}VY 3.5636 - 112 1 2.126 40211.4 1.0 5609 3622 9226 DOHH2_400M_050219_1,9233 DOHH2_400M_050219_1,9233,MCIETAVLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9234 53.408 800.0 211110.0 25 0 15898.0 + 40982 VMAPRALLL 9 153 492.3067454172869 982.5989379013738 2 492.3069335818291 MULTI CID FTMS 0 0 0 9226 109292.5546875 1.0 0 0.0 8 Unmodified _VMAPRALLL_ ENSG00000204525|ENST00000376228|HLA-C;ENST00000484378.1_1_6:31239370-31239848:-|nuORF;nc|ENSG00000204525|P10321-2|HLA-C 54.773552608820026 0.0299037012502309 1 VMAP[{I|L}A]R{I|L}{I|L} 9 2 + 82.418 0.0 0.0 8.3878 8.3878 97.373 0.0 0.0 0.0 53.974856131339166 14.09256854528806 14.09256854528806 26.817496819840656 0 1.6861818737241734 2.0 0.0 0.3494850021680094 VMAP[{I|L}A]R{I|L}{I|L};VVCP[{I|L}A]R{I|L}{I|L};[TP]{[RE]|[WV]}VR{I|L}{I|L};[TP]{I|L}[RD]R{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[H{I|L}]{M(Oxidation (M))|F}V{I|L}{I|L};[VP][Q{I|L}]{I|L}AVM{I|L};[VP][Q{I|L}]A{I|L}VM{I|L};[VP][Q{I|L}]AMV{I|L}{I|L};[VP][Q{I|L}]{I|L}{[MG]|[TS]}{I|L}{I|L};[TP]{I|L}[K{I|L}]{[DA]|[EG]}{I|L}{I|L} 8.3878;5.6585;2.8885;2.455;2.1158;1.2695;0.89503;0.68455;0.24907;0.18554 -;-;-;-;-;-;-;-;-;- 351 + 1 2.126 131444.5 0.949999988079071 5610 3622 9226 DOHH2_400M_050219_1,9234 DOHH2_400M_050219_1,9234,VMAPRALLL True True VMAPRALLL 53.407763 492.306933581829 674665.75 9226.0 nc|ENSG00000204525|P10321-2|HLA-C;;ENST00000484378.1_1_6:31239370-31239848:-|nuORF;;ENSG00000204525|ENST00000376228|HLA-C 2.3938856025536857 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9236 53.425 800.0 159750.0 25 0 8900.9 -1 0 137 881.9098372136722 0 881.9098998904228 PEAK CID FTMS 0 0 0 9235 52837.42578125 0.4887175755897541 1 -0.0691261291503906 1 1 {M(Oxidation (M))|F}ANQQAE 7 -1 54.967 0.0 0.0 3.1199 0.0 0.0 521.2930343593799 449.1441134088501 970.43714776823 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 1.274227503252014 {M(Oxidation (M))|F}ANQQAE 3.1199 - 1178 + 1 2.13 88218.5 0.5600000023841858 5611 3623 9235 DOHH2_400M_050219_1,9236 DOHH2_400M_050219_1,9236, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9237 53.43 232.0 993390.0 25 0 94428.0 + 25198 MTKILLLHR 9 105 562.8501503909521 1123.685747848704 2 562.8505126833916 MULTI CID FTMS 0 0 0 9235 282870.90625 0.0349224095545885 -2 0.1165733337402343 2 Unmodified _MTKILLLHR_ REV__ENST00000507256.1_1_1:154407503-154427053:+|nuORF 66.45667989310934 0.0225072657982126 1 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 -1 + 125.3 0.0 0.0 11.151 11.151 94.445 0.0 0.0 0.0 99.49957664146795 23.4543872825298 23.4543872825298 9.208187539523747 0 1.9291746928241125 2.0 0.0 1.7416440611282624 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;{I|L}VN{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HR;{I|L}VGG{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HR;{I|L}VNH{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R;{I|L}VGGH{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R 11.151;10.332;10.077;9.2571;4.8078;3.9883 -;-;-;-;-;- 1107 + 1 2.13 176458.5 1.0 5612 3623 9235 DOHH2_400M_050219_1,9237 DOHH2_400M_050219_1,9237,MTKILLLHR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9238 53.44 583.0 506990.0 25 0 116100.0 + 31669 RRIYLILEY 9 103 619.866120448967 1237.7176879647338 2 619.8670532107353 MULTI CID FTMS 0 0 0 9235 186908.90625 0.4910612684028362 -1 0.0687255859375 3 Unmodified _RRIYLILEY_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;ENST00000584561.1_1_17:8109844-8110310:-|nuORF;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 81.89019881105858 0.0170587746866453 1 {I|L}{I|L}YRR{I|L}{I|L}EY 9 4 + 67.444 0.0 0.0 5.449 5.449 87.951 0.0 0.0 0.0 12.463877117009131 14.973024840566469 12.463877117009131 12.463877117009131 0 1.4802046884880935 1.3010299956639813 0.0 1.6989700043360187 {I|L}{I|L}YRR{I|L}{I|L}EY;RR{I|L}[Y{I|L}]{I|L}{I|L}EY;{[QD]|[EN]|[WG]|[KD]|[RS]}VQT{I|L}{I|L}{I|L}T[HA];RR{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L}T[HA];RR{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}T[HA] 5.449;4.442;0.80375;0.79526;0.64305 -;+;-;-;- + 203 1 2.13 213966.0 1.0 5613 3623 9235 DOHH2_400M_050219_1,9238 DOHH2_400M_050219_1,9238,RRIYLILEY True True RRIYLILEY 53.440083 619.867053210735 2061132.375 9235.0 ENST00000584561.1_1_17:8109844-8110310:-|nuORF;;nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;nc|ENSG00000178999|Q96GD4-2|AURKB;;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB 6.539280255635579 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9239 53.447 363.0 329740.0 25 0 10868.0 -1 0 115 1052.1851388197974 3153.5335870595927 3 1052.853076159954 MULTI CID FTMS 0 0 0 9235 243394.375 0.6291809270600016 -1 0.0687255859375 4 1 D[QP]NVM[EP] 8 -1 37.268 0.0 0.0 1.1818 0.0 0.0 2225.0855118277577 0.0 2225.0855118277577 0.0 5.880456295278407 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.7614393726401688 D[QP]NVM[EP] 1.1818 - 686 1 2.13 82503.6 1.0 5614 3623 9235 DOHH2_400M_050219_1,9239 DOHH2_400M_050219_1,9239, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9240 53.456 522.0 208530.0 25 0 50432.0 -1 0 89 951.9731052169778 1901.931657500756 2 952.4760619997978 MULTI CID FTMS 0 0 0 9235 121675.5703125 1.0 0 0.0 5 1 {M(Oxidation (M))|F}ANQQ 5 -1 19.966 0.0 0.0 1.0498 0.0 0.0 620.3844906079806 690.2483880726192 1310.6328786805998 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {M(Oxidation (M))|F}ANQQ 1.0498 - 290 + 1 2.13 76828.1 1.0 5615 3623 9235 DOHH2_400M_050219_1,9240 DOHH2_400M_050219_1,9240, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9241 53.463 399.0 217560.0 25 0 29032.0 + 32942 SELKFNEYW 9 100 608.2870565678801 1214.55956020256 2 608.2875854372978 MULTI CID FTMS 0 0 0 9235 112775.0 1.0 0 0.0 6 Unmodified _SELKFNEYW_ ENSG00000189171|ENST00000476133|S100A13 47.594388314883695 0.0456443387682827 1 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DK{I|L}SEYW 9 5 + 58.88 0.0 0.0 4.8479 4.8479 73.818 0.0 0.0 0.0 0.7255998297264199 0.7255998297264199 0.7255998297264199 0.7255998297264199 0 0.9247425010840048 0.0 0.0 0.7059771852360797 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DK{I|L}SEYW;{[CT]|[{M(Oxidation (M))|F}G]}ADK{I|L}SEYW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VAN{I|L}SEYW;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}EK{I|L}SEYW;[{M(Oxidation (M))|F}V]SAN{I|L}SEYW;{[CT]|[{M(Oxidation (M))|F}G]}YES{I|L}KEGW;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}K{I|L}SEYW;[MT]{[MG]|[TS]}{I|L}YKDAW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}N{I|L}SEYW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DKY{I|L}{[ES]|[DT]|[{I|L}C]}W 4.8479;4.7881;4.7627;4.6;4.5471;4.5403;4.3101;4.2756;4.2072;4.1715 -;-;-;-;-;-;-;-;-;- 1055 1 2.13 70145.9 1.0 5616 3623 9235 DOHH2_400M_050219_1,9241 DOHH2_400M_050219_1,9241,SELKFNEYW True True SELKFNEYW 53.463037 608.287585437298 657496.0 9235.0 ENSG00000189171|ENST00000476133|S100A13 6.275054931640625 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9242 53.477 800.0 296300.0 25 0 14480.0 + -1 ADEDPIMGF 9 156 994.4706498360848 1986.926746738969 2 994.4719726443292 MULTI CID FTMS 0 0 0 9235 105135.296875 1.0 0 0.0 7 ENSG00000102898|ENST00000219169|NUTF2 1 [{I|L}P]DG{I|L}VY{[WT]|[RM]}EE[YG]SN[MN] 17 -1 + 60.318 0.0 0.0 3.0357 3.0357 69.713 0.0 0.0 0.0 24.63517871772555 -4.28787954322415 -4.28787954322415 1.7609125905568137 0 0.0 1.6989700043360187 0.3054621874040891 0.3807196863200844 [{I|L}P]DG{I|L}VY{[WT]|[RM]}EE[YG]SN[MN];[{I|L}P]DGV{I|L}Y{[WT]|[RM]}EE[YG]SN[MN];[{I|L}P]DR{I|L}Y{[WT]|[RM]}EE[YG]SN[MN];[{I|L}P]ADVVY{[WT]|[RM]}EE[YG]SN[MN];[{I|L}P]DAVVY{[WT]|[RM]}EE[YG]SN[MN];[{I|L}P]DR{I|L}YS{[TV]|[{I|L}S]}EE[YG]SN[MN];[{I|L}P]DG{I|L}VY{[WT]|[RM]}E[WY]SN[MN];[{I|L}P]DG{I|L}VYS{[TV]|[{I|L}S]}EE[YG]SN[MN];[{I|L}P]MPRY{[WT]|[RM]}EE[YG]SN[MN];[{I|L}P]DGV{I|L}Y{[WT]|[RM]}E[WY]SN[MN] 3.0357;2.9471;2.936;2.7956;2.7327;2.7314;2.6571;2.6403;2.605;2.5685 -;-;-;-;-;-;-;-;-;- 21800 1 2.13 151811.2 0.6299999952316284 5617 3623 9235 DOHH2_400M_050219_1,9242 DOHH2_400M_050219_1,9242, False False ADEDPIMGF 53.476902 994.471972644329 897481.75 9235.0 ENSG00000102898|ENST00000219169|NUTF2 6.65604035059611 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9244 53.483 180.0 352480.0 25 0 52115.0 -1 LAPESCYLY 9 103 558.2587344377769 1114.5029159423536 2 558.2593871951103 MULTI CID FTMS 0 0 0 9243 331463.4375 0.5095158057151037 2 -0.2677040100097656 1 Carbamidomethyl (C) _LAPESC(Carbamidomethyl (C))YLY_ ENST00000428559.6_1_12:16109876-16111177:+|nuORF 23.1484247019978 0.2366544122328345 1 {I|L}VEA{I|L}VY 7 -1 40.023 0.0 0.0 3.5911 0.0 0.0 309.0455494611344 0.0 309.0455494611344 0.0 8.517513706999292 0.0 0.0 0 0.7429928190999391 0.0 0.3252574989159953 0.0 {I|L}VEA{I|L}VY 3.5911 - 557 1 2.13 52516.3 1.0 5618 3624 9243 DOHH2_400M_050219_1,9244 DOHH2_400M_050219_1,9244,LAPESCYLY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9245 53.484 14.0 8613200.0 25 0 1237900.0 + 9168 FGGVLILIHR 10 92 375.569541503551 1123.6867951108532 3 375.5694152712822 MULTI CID FTMS 0 0 0 9243 5767037.0 0.356972715005509 -1 0.0691261291503906 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 54.773552608820026 0.052133998764723 1 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 100.54 0.0 0.0 8.947 8.947 93.662 0.0 0.0 0.0 82.91190268982902 23.894615430169 23.894615430169 9.208187539523747 0 1.350576203518622 2.0 0.0 1.2416440611282626 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 8.947;8.1276 -;- 251 + 1 2.13 98958.7 1.0 5619 3624 9243 DOHH2_400M_050219_1,9245 DOHH2_400M_050219_1,9245,FGGVLILIHR True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9246 53.488 209.0 326670.0 25 0 92237.0 + 16513 KANPGAWIL 9 82 485.2795085654341 968.5444641976684 2 485.2793456912041 MULTI CID FTMS 0 0 0 9243 268887.3125 0.8266314944859172 -1 0.0691261291503906 3 Unmodified _KANPGAWIL_ ENSG00000102595|ENST00000376747|UGGT2;ENSG00000136731|ENST00000259253|UGGT1;nc|ENSG00000136731|Q9NYU2-2|UGGT1 28.486842064014134 0.1687311288560894 1 [QP]WN[KA]{I|L}{I|L} 8 6 + 38.109 0.0 0.0 3.9347 3.9347 72.76 0.0 0.0 0.0 2.6638000898875447 26.682437647924218 2.6638000898875447 2.218487496163561 0 0.9247425010840048 0.0 0.0 0.4247425010840047 [QP]WN[KA]{I|L}{I|L};[QP]N[KA]W{I|L}{I|L};[QP]NW[KA]{I|L}{I|L};[QP]WGG[KA]{I|L}{I|L};[QP]GG[KA]W{I|L}{I|L};[QP]GGW[KA]{I|L}{I|L} 3.9347;3.7056;3.213;2.9784;2.7493;2.2567 -;-;-;-;-;- 169 1 2.13 57493.9 1.0 5620 3624 9243 DOHH2_400M_050219_1,9246 DOHH2_400M_050219_1,9246,KANPGAWIL False True KANPGAWIL 53.488072 485.279345691204 2293269.0 9243.0 ENSG00000136731|ENST00000259253|UGGT1;;nc|ENSG00000136731|Q9NYU2-2|UGGT1;;ENSG00000102595|ENST00000376747|UGGT2 5.73486852645874 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9247 53.494 341.0 326660.0 25 0 44570.0 + 473 AEGDLVRLL 9 114 493.2872486199615 984.559944306723 2 493.2875854372978 MULTI CID FTMS 0 0 0 9243 163103.515625 0.6099516672338484 -1 0.0691261291503906 4 Unmodified _AEGDLVRLL_ ENSG00000100365|ENST00000248899|NCF4 72.96794272382148 0.0199516581995792 1 AEGD{I|L}VR{I|L}{I|L} 9 0 + 101.73 0.0 0.0 10.333 10.333 99.819 0.0 0.0 0.0 85.88676600919719 9.463728584247631 9.463728584247631 85.93721290870664 0 1.7302046884880935 2.0 0.4247425010840047 0.3252574989159953 + + AEGD{I|L}VR{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GVR{I|L}{[QN]|[E{I|L}]|[KN]}A;{[CP]|[EA]}[{I|L}A]R{I|L}{[QN]|[E{I|L}]|[KN]}A;{NN|[MP]|[D{I|L}]|[EV]}RR{I|L}{[QN]|[E{I|L}]|[KN]}A;{NN|[MP]|[D{I|L}]|[EV]}GV[VG]{I|L}{[QN]|[E{I|L}]|[KN]}A;{NN|[MP]|[D{I|L}]|[EV]}GVR{[CP]|[EA]}{I|L}{I|L};{[VA]|[{I|L}G]}DVR{I|L}{[QN]|[E{I|L}]|[KN]}A;{[CP]|[EA]}[{I|L}A]R{[CP]|[EA]}{I|L}{I|L} 10.333;1.6043;1.1464;0.67247;0.66903;0.48744;0.3478;0.029586 +;-;-;-;-;-;-;- + 190 + 1 2.13 89282.2 1.0 5621 3624 9243 DOHH2_400M_050219_1,9247 DOHH2_400M_050219_1,9247,AEGDLVRLL True True AEGDLVRLL 53.494233 493.287585437298 1501022.25 9243.0 ENSG00000100365|ENST00000248899|NCF4 4.470663229624431 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9248 53.503 515.0 219510.0 25 0 40588.0 + + -1 AEGLLSHYL 9 113 501.3025197696827 1500.885729909248 3 501.3027831912041 MULTI CID FTMS 0 0 0 9243 150678.515625 1.0 0 0.0 5 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RQILQRLTLRY_ ENST00000568816.5_1_15:45879846-45893495:+|nuORF;ENST00000563160.5_1_15:45879945-45897659:+|nuORF;ENSG00000104164|ENST00000220531|BLOC1S6;nc|ENSG00000104164|Q9UL45-2|BLOC1S6 0.3070304955306653 0.8736993455979228 1 G{I|L}{I|L}SHY{I|L} 7 -1 33.845 0.0 0.0 2.255 0.0 0.0 699.4461417258273 0.0 699.4461417258273 0.0 13.732232874949624 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 G{I|L}{I|L}SHY{I|L} 2.255 - 232 + 1 2.13 103992.8 1.0 5622 3624 9243 DOHH2_400M_050219_1,9248 DOHH2_400M_050219_1,9248,RQILQRLTLRY False False AEGLLSHYL 53.503322 501.302783191204 767804.875 9243.0 ENST00000568816.5_1_15:45879846-45893495:+|nuORF;;ENST00000563160.5_1_15:45879945-45897659:+|nuORF;;ENSG00000104164|ENST00000220531|BLOC1S6;;nc|ENSG00000104164|Q9UL45-2|BLOC1S6 5.337067286173503 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9249 53.517 800.0 232590.0 25 0 14416.0 + 25696 NIDIPEGNWY 10 135 610.7825475972536 1219.550542261307 2 610.7828857302666 MULTI CID FTMS 0 0 0 9243 128042.6953125 1.0 0 0.0 6 Unmodified _NIDIPEGNWY_ ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1 47.594388314883695 0.0942698883389255 1 {[QV]|[N{I|L}]|[RA]|[KV]}DWPN{I|L}{[DA]|[EG]}Y 10 5 + 57.959 0.0 0.0 4.7525 4.7525 55.745 0.0 0.0 0.0 9.839037919751007 7.269987279362624 7.269987279362624 0.0 0 0.6505149978319906 2.0 0.0 1.1610892374447828 {[QV]|[N{I|L}]|[RA]|[KV]}DWPN{I|L}{[DA]|[EG]}Y;{[QV]|[N{I|L}]|[RA]|[KV]}D{[DA]|[EG]}PN{I|L}WY;{[QV]|[N{I|L}]|[RA]|[KV]}D[PA]ND{I|L}WY;{[QV]|[N{I|L}]|[RA]|[KV]}DWPN{[DA]|[EG]}{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}D{[DA]|[EG]}PNW{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}D[PA]DN{I|L}WY;{[QV]|[N{I|L}]|[RA]|[KV]}D[PA]NDW{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}D[PA]DNW{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}DWPGG{I|L}{[DA]|[EG]}Y;{[QV]|[N{I|L}]|[RA]|[KV]}D{[DA]|[EG]}PN{I|L}{[DA]|[EG]}Y 4.7525;4.7525;4.5157;4.4858;4.4858;4.4782;4.249;4.2115;4.001;4.001 -;-;-;-;-;-;-;-;-;- 1851 1 2.13 138461.4 0.4900000095367431 5623 3624 9243 DOHH2_400M_050219_1,9249 DOHH2_400M_050219_1,9249,NIDIPEGNWY True True NIDIPEGNWY 53.51716 610.782885730267 898946.6875 9243.0 ENSG00000165671|ENST00000439151|NSD1;;nc|ENSG00000165671|Q96L73-2|NSD1;;nc|ENSG00000165671|Q96L73-3|NSD1 5.573697408040364 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9250 53.53 769.0 104490.0 25 0 38928.0 30920 RIYRRLQRQGR 11 87 751.4497495632727 1500.8849461933453 2 751.9506103396416 MULTI CID FTMS 0 0 0 9243 103205.3671875 0.9186427719961486 -1 0.0691261291503906 7 Unmodified _RIYRRLQRQGR_ ENSG00000264717|ENST00000576178|NPY4R2 0.3070304955306653 0.8736993455979228 1 [{I|L}V]N{M(Oxidation (M))|F} 4 10 11.604 0.0 0.0 0.77314 0.0 0.0 0.0 1024.594515855708 1024.594515855708 0.0101688921695632 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 [{I|L}V]N{M(Oxidation (M))|F} 0.77314 - 20 1 2.13 74431.6 1.0 5624 3624 9243 DOHH2_400M_050219_1,9250 DOHH2_400M_050219_1,9250,RIYRRLQRQGR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9251 53.543 706.0 191430.0 25 0 10010.0 + 7080 EELPGLDSQW 10 143 587.2737927481959 1172.5330325631917 2 587.2746459841728 MULTI CID FTMS 0 0 0 9243 98845.421875 1.0 0 0.0 8 Unmodified _EELPGLDSQW_ ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11 29.081581746732265 0.3152867722954398 1 {I|L}V{I|L}GW 5 7 37.345 0.0 0.0 3.185 0.0 0.0 586.1856518440911 0.0 586.1856518440911 0.0 10.087249439005504 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 {I|L}V{I|L}GW 3.185 - 869 + 1 2.13 99407.3 1.0 5625 3624 9243 DOHH2_400M_050219_1,9251 DOHH2_400M_050219_1,9251,EELPGLDSQW False True EELPGLDSQW 53.542751 587.274645984173 663044.9375 9243.0 nc|ENSG00000102226|P51784|USP11;;ENSG00000102226|ENST00000377107|USP11 5.346488396326701 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9252 53.554 633.0 119620.0 25 0 11655.0 + 45300 YSEIKDFLSY 10 109 632.8083242675707 0 632.8080322146416 PEAK CID FTMS 0 0 0 9243 90963.2890625 0.8662142401999168 1 -0.1287384033203125 9 Unmodified _YSEIKDFLSY_ ENSG00000152457|ENST00000378278|DCLRE1C;ENST00000492201.5_1_10:14962436-14970058:-|nuORF;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C;nc|ENSG00000152457|Q96SD1-4|DCLRE1C 32.61649475675321 0.1894487248183418 1 {I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ED 7 7 25.895 0.0 0.0 2.0493 0.0 0.0 268.10601513494754 132.0458925836547 400.1519077186023 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.8494850021680094 0.0 {I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ED 2.0493 - 96 + 1 2.13 62550.5 1.0 5626 3624 9243 DOHH2_400M_050219_1,9252 DOHH2_400M_050219_1,9252,YSEIKDFLSY False True YSEIKDFLSY 53.553801 632.808032214642 668329.3125 9243.0 ENSG00000152457|ENST00000378278|DCLRE1C;;nc|ENSG00000152457|Q96SD1-3|DCLRE1C;;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;;ENST00000492201.5_1_10:14962436-14970058:-|nuORF;;nc|ENSG00000152457|Q96SD1-4|DCLRE1C 9.79249064127604 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9253 53.559 176.0 564100.0 25 0 41858.0 -1 0 86 958.4582131075376 1914.901873281875 2 959.4562255740166 MULTI CID FTMS 0 0 0 9243 215500.421875 0.3206608753764363 -1 0.0691261291503906 10 1 {M(Oxidation (M))|F}ANQQA[EP]A{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 12 -1 67.979 0.0 0.0 3.55 0.0 0.0 520.281710738296 0.0 520.281710738296 0.0 41.38786323110581 0.0 0.0 0 0.0 0.0 0.0 1.4436726795685342 {M(Oxidation (M))|F}ANQQA[EP]A{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 3.55 - 7383 + 1 2.13 71143.8 1.0 5627 3624 9243 DOHH2_400M_050219_1,9253 DOHH2_400M_050219_1,9253, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9254 53.573 800.0 358820.0 25 0 88616.0 + 11143 GEIPWSQEL 9 121 1058.5122211901603 1057.5049447235606 1 1058.512011706829 MULTI CID FTMS 0 0 0 9243 190843.4375 0.9912087093417312 -1 0.0691261291503906 11 Unmodified _GEIPWSQEL_ ENSG00000140992|ENST00000342085|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;nc|ENSG00000140992|O15530-4|PDPK1 117.7605887643192 0.0024069341015653 1 [WP]SQEG{I|L}E{I|L} 9 6 + 93.011 0.0 0.0 8.7953 8.7953 83.462 0.0 0.0 0.0 24.13734275855268 40.13063838263436 24.13734275855268 0.6356056965476142 0 0.3252574989159953 1.6989700043360187 1.994084020450552 0.5994850021680094 [WP]SQEG{I|L}E{I|L};[WP]SQE{I|L}GE{I|L};[WP]SQEGE{I|L}{I|L};[WP]SQEW{I|L}{I|L};[WP]SQE{I|L}W{I|L};[WP]S[AG]EG{I|L}E{I|L};[WP]S[AG]E{I|L}GE{I|L};[WP]SQ{I|L}EGE{I|L};[WP]SQ{I|L}WE{I|L};[WP]S{[DA]|[EG]}AG{I|L}E{I|L} 8.7953;8.7352;8.2084;7.8204;7.7692;7.3577;7.2976;7.243;6.9151;6.8836 -;-;-;-;-;-;-;-;-;- 2890 1 2.13 180853.1 0.75 5628 3624 9243 DOHH2_400M_050219_1,9254 DOHH2_400M_050219_1,9254,GEIPWSQEL True True GEIPWSQEL 53.572582 1058.51201170683 2102446.0 9243.0 ENSG00000140992|ENST00000342085|PDPK1;;nc|ENSG00000140992|O15530-3|PDPK1;;nc|ENSG00000140992|O15530-4|PDPK1;;nc|ENSG00000140992|O15530-2|PDPK1 7.309250036875407 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9255 53.586 800.0 280490.0 25 0 9267.2 -1 0 155 1164.5378607332882 3490.591752800065 3 1164.880541980267 MULTI CID FTMS 0 0 0 9243 175512.421875 0.1729419744991457 -3 0.185699462890625 12 1 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQAED 14 -1 98.746 0.0 0.0 2.8289 0.0 0.0 1485.7194213777566 333.13254724674067 1818.8519686244967 0.0 0.0 0.0 0.0 0 1.774227503252014 0.0 0.6549471895720985 0.4247425010840047 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQAED 2.8289 - 143980 + 1 2.13 133127.1 0.6700000166893005 5629 3624 9243 DOHH2_400M_050219_1,9255 DOHH2_400M_050219_1,9255, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9256 53.601 800.0 190880.0 25 0 3729.4 -1 0 159 976.1135192096184 2925.3187282290546 3 976.7816650271416 MULTI CID FTMS 0 0 0 9243 104896.484375 0.3787006571525016 -1 0.0691261291503906 13 1 {[TV]|[{I|L}S]}EVV{I|L} 6 -1 34.843 0.0 0.0 1.1911 0.0 0.0 0.0 2281.915337646156 2281.915337646156 8.167994431830351 0.0 0.0 0.0 0 0.5 0.0 1.4436726795685342 0.0 {[TV]|[{I|L}S]}EVV{I|L} 1.1911 - 9960 1 2.13 110432.3 0.5699999928474426 5630 3624 9243 DOHH2_400M_050219_1,9256 DOHH2_400M_050219_1,9256, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9257 53.606 232.0 323650.0 25 0 31019.0 + 36872 TENPVIMGL 9 98 487.2540493083971 972.4935456835942 2 487.2549011111259 MULTI CID FTMS 0 0 0 9243 110746.8515625 0.4386737083390479 -1 0.0691261291503906 14 Unmodified _TENPVIMGL_ ENSG00000110367|ENST00000534980|DDX6;ENST00000525082.1_1_11:118639020-118656960:-|nuORF;ENST00000533239.1_1_11:118656759-118656960:-|nuORF 58.6788170122104 0.0268135626297836 1 [YR]{I|L}VPN[DP] 8 8 + 43.594 0.0 0.0 4.4827 4.4827 86.081 0.0 0.0 0.0 20.406075122407685 6.989700043360188 6.989700043360188 20.49926291259105 0 0.5 0.0 0.2742275032520141 1.1237125054200234 [YR]{I|L}VPN[DP];[YR]{I|L}VPGG[DP];[YR][VP]{I|L}N[DP];[YR][VP]{I|L}GG[DP] 4.4827;2.3748;1.4737;0.084521 -;-;-;- 160 + 1 2.13 62224.1 1.0 5631 3624 9243 DOHH2_400M_050219_1,9257 DOHH2_400M_050219_1,9257,TENPVIMGL True True TENPVIMGL 53.605813 487.254901111126 1573279.625 9243.0 ENST00000525082.1_1_11:118639020-118656960:-|nuORF;;ENSG00000110367|ENST00000534980|DDX6;;ENST00000533239.1_1_11:118656759-118656960:-|nuORF 6.415912628173828 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9259 53.612 95.0 814070.0 25 0 64561.0 -1 0 70 902.4173484618756 1802.8201439905508 2 902.9200927615166 MULTI CID FTMS 0 0 0 9258 685995.3125 0.3317216495431119 1 -0.1389656066894531 1 1 {M(Oxidation (M))|F}ANQQAECC(Carbamidomethyl (C))V{I|L} 11 -1 80.993 0.0 0.0 4.4926 0.0 0.0 521.2833179702669 0.0 521.2833179702669 0.0 63.245948527819394 0.0 0.0 0 0.0 0.0 0.0 1.2302046884880935 {M(Oxidation (M))|F}ANQQAECC(Carbamidomethyl (C))V{I|L} 4.4926 - 792 + 1 2.121 60075.8 1.0 5632 3625 9258 DOHH2_400M_050219_1,9259 DOHH2_400M_050219_1,9259, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9260 53.625 800.0 94837.0 25 0 6646.8 + -1 MNWRYCRLWCL 11 109 837.3814141995856 1672.7482754659711 2 837.3826171755791 MULTI CID FTMS 0 0 0 9258 43704.66796875 0.1213270792306824 2 -0.2366371154785156 2 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))NWRYC(Carbamidomethyl (C))RLWC(Carbamidomethyl (C))L_ REV__ENST00000584052.5_1_18:21043977-21044085:+|nuORF 0.3506318815782774 0.8734936314171269 1 Y{M(Oxidation (M))|F}ANQQAE 8 -1 46.619 0.0 0.0 2.787 0.0 0.0 358.2233253700711 360.09580408267817 718.3191294527493 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 Y{M(Oxidation (M))|F}ANQQAE 2.787 - 646 + 1 2.121 55678.3 0.7300000190734863 5633 3625 9258 DOHH2_400M_050219_1,9260 DOHH2_400M_050219_1,9260,MNWRYCRLWCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9261 53.629 210.0 477740.0 25 0 65657.0 + 36882 TEPPPLLVY 9 97 514.7867440831279 1027.5589352330558 2 514.7867309451103 MULTI CID FTMS 0 0 0 9258 258756.921875 0.658381577576823 -1 0.1287384033203125 3 Unmodified _TEPPPLLVY_ ENSG00000174231|ENST00000304992|PRPF8 67.34385681178166 0.0221257235307089 1 {[HG]|PP}{I|L}P{I|L}VMVY 9 5 + 49.051 0.0 0.0 4.7736 4.7736 76.692 0.0 0.0 0.0 3.2568864632742844 31.30387817565364 3.2568864632742844 3.0102999566398125 0 1.0 0.0 0.0 0.0 {[HG]|PP}{I|L}P{I|L}VMVY;{[HG]|PP}{I|L}{I|L}PVMVY;{[HG]|PP}{I|L}{I|L}TEPVY;[{I|L}P]{I|L}PTEPVY;{[ET]|[MV]}[YK]{I|L}{I|L}VY;{[HG]|PP}{I|L}PV{I|L}MVY;[{I|L}P]P{I|L}TEPVY;{[DS]|[MA]|[CV]|TT}[YR]{I|L}{I|L}VY;[{I|L}P]{I|L}[RH]MVY;{[ET]|[MV]}[Y{I|L}]K{I|L}VY 4.7736;4.4806;4.1658;4.1213;4.0227;3.9511;3.9499;3.7366;2.5668;2.5538 -;-;-;-;-;-;-;-;-;- 793 1 2.121 81915.2 1.0 5634 3625 9258 DOHH2_400M_050219_1,9261 DOHH2_400M_050219_1,9261,TEPPPLLVY True True TEPPPLLVY 53.629442 514.78673094511 5990933.0 9258.0 ENSG00000174231|ENST00000304992|PRPF8 6.763211886088054 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9262 53.634 248.0 771800.0 25 0 114860.0 2914 AVGFLLRH 8 99 456.7742524454016 911.5339519576032 2 456.7743713259697 MULTI CID FTMS 0 0 0 9258 225251.1875 1.0 0 0.0 4 Unmodified _AVGFLLRH_ ENST00000396437.3_1_22:42341142-42343146:-|nuORF;nc|ENSG00000100162|Q9NSP4-2|CENPM 42.96799951952854 0.1846367511955703 1 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 7 6 + 85.896 0.0 0.0 9.4232 9.4232 95.075 0.0 0.0 0.0 65.71835995200884 29.238959865288464 29.238959865288464 9.33053210369387 0 1.25 0.0 0.0 1.2918727718234408 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 9.4232;8.3996 -;- 125 + 1 2.121 150781.3 1.0 5635 3625 9258 DOHH2_400M_050219_1,9262 DOHH2_400M_050219_1,9262,AVGFLLRH False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_1 9263 53.647 748.0 195600.0 25 0 24384.0 + 30757 RHPLVQAIIHR 11 138 447.2727682830174 1338.7964754492525 3 447.2719299197197 MULTI CID FTMS 0 0 0 9258 124044.3984375 0.7994839756103677 -1 0.1287384033203125 5 Unmodified _RHPLVQAIIHR_ REV__ENSG00000145721|ENST00000274382|LIX1 4.897010918128616 0.8520435188433833 1 {I|L}{I|L}{I|L}HR 5 -1 20.477 0.0 0.0 1.5295 0.0 0.0 688.3658246697586 0.0 688.3658246697586 0.0 11.32822848035353 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L}HR 1.5295 - 33 + 1 2.121 127975.9 1.0 5636 3625 9258 DOHH2_400M_050219_1,9263 DOHH2_400M_050219_1,9263,RHPLVQAIIHR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9264 53.656 512.0 135840.0 25 0 8469.9 + 4358 DATIRIWSV 9 112 530.7930503585835 1059.571547783967 2 530.7929565310478 MULTI CID FTMS 0 0 0 9258 94933.609375 1.0 0 0.0 6 Unmodified _DATIRIWSV_ ENSG00000110107|ENST00000227524|PRPF19 65.47368725323818 0.0230515101691092 1 {[DA]|[EG]}T{I|L}R{I|L}WSV 9 0 + 75.301 0.0 0.0 7.1067 7.1067 88.725 0.0 0.0 0.0 18.67931555708239 14.09256854528806 14.09256854528806 7.742275032520141 0 1.8182503180159344 2.0 1.079689690656103 0.0 + + {[DA]|[EG]}T{I|L}R{I|L}WSV;{[DA]|[EG]}T{I|L}R{I|L}SWV;{[SA]|[TG]}E{I|L}R{I|L}WSV;{[DA]|[EG]}T{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EV;{[SA]|[TG]}E{I|L}R{I|L}SWV;{[CP]|[EA]}S{I|L}R{I|L}WSV;{[CP]|[EA]}S{I|L}R{I|L}SWV;{[SA]|[TG]}E{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EV;{[CP]|[EA]}S{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EV 7.1067;6.376;5.3438;4.799;4.6131;4.1791;3.4484;3.0361;1.8714 +;-;-;-;-;-;-;-;- + 191 1 2.121 61018.5 1.0 5637 3625 9258 DOHH2_400M_050219_1,9264 DOHH2_400M_050219_1,9264,DATIRIWSV True True DATIRIWSV 53.656049 530.792956531048 589819.4375 9258.0 ENSG00000110107|ENST00000227524|PRPF19 8.172639687856039 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9265 53.67 800.0 217610.0 25 0 23003.0 + 6370 DVVKRLLSL 9 118 521.8342452285791 1041.653937523958 2 521.8344604372978 MULTI CID FTMS 0 0 0 9258 96960.4375 0.5464674053033722 -1 0.1287384033203125 7 Unmodified _DVVKRLLSL_ ENSG00000116898|ENST00000373116|MRPS15 61.08992128646608 0.0254786290039527 1 DVVK 4 5 58.418 0.0 0.0 5.6082 0.0 0.0 0.0 597.3735894943976 597.3735894943976 17.461987796517704 0.0 0.0 0.0 0 0.75 2.0 0.0 0.3494850021680094 + DVVK 5.6082 + + 197 + 1 2.121 136803.2 0.4199999868869781 5638 3625 9258 DOHH2_400M_050219_1,9265 DOHH2_400M_050219_1,9265,DVVKRLLSL True True DVVKRLLSL 53.669882 521.834460437298 1240823.25 9258.0 ENSG00000116898|ENST00000373116|MRPS15 4.809882640838623 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9266 53.684 800.0 67940.0 25 0 3032.3 -1 0 82 966.9639424445278 1931.913331955856 2 967.9573852419852 MULTI CID FTMS 0 0 0 9258 100705.8671875 0.0782931206358088 20 -0.8363685607910156 8 1 [NP]{I|L}DW 5 -1 26.911 0.0 0.0 1.393 0.0 0.0 0.0 1303.617347418999 1303.617347418999 5.484550065040281 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [NP]{I|L}DW 1.393 - 199 1 2.121 46344.7 0.8700000047683716 5639 3625 9258 DOHH2_400M_050219_1,9266 DOHH2_400M_050219_1,9266, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9267 53.699 800.0 108660.0 25 0 38533.0 20103 LKEKRLLDVSR 11 81 678.9186942576345 0 678.9193603396416 PEAK CID FTMS 0 0 0 9258 93485.5 1.0 0 0.0 9 Unmodified _LKEKRLLDVSR_ ENST00000358825.9_1_11:129771457-129771502:-|nuORF 0.9622753412299312 0.4761840153648598 1 P 1 11 3.0989 0.0 0.0 0.22857 0.0 0.0 1157.704211780114 98.03814111881093 1255.742352898925 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.22857 - 4 + 1 2.121 79134.3 0.4399999976158142 5640 3625 9258 DOHH2_400M_050219_1,9267 DOHH2_400M_050219_1,9267,LKEKRLLDVSR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9268 53.71 631.0 129530.0 25 0 40490.0 31626 RREVEVKLTPL 11 68 670.4061757370941 1338.7977985409882 2 670.4067260622978 MULTI CID FTMS 0 0 0 9258 94171.5703125 0.7041794652798793 -1 0.1287384033203125 10 Unmodified _RREVEVKLTPL_ ENSG00000143815|ENST00000272163|LBR 1.1933415558491238 0.8695176722560516 1 {M(Oxidation (M))|F} 1 11 6.9897 0.0 0.0 0.52209 0.0 0.0 669.5512466485768 519.1659639947874 1188.717210643364 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.52209 - 3 + 1 2.121 76499.4 1.0 5641 3625 9258 DOHH2_400M_050219_1,9268 DOHH2_400M_050219_1,9268,RREVEVKLTPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9269 53.717 311.0 253020.0 25 0 61337.0 44480 YPAAGAVR 8 85 402.7206515059326 803.4267500786652 2 402.7207214236259 MULTI CID FTMS 0 0 0 9258 222001.125 1.0 0 0.0 11 Unmodified _YPAAGAVR_ ENST00000328257.12_1_11:73882344-73914840:+|nuORF 2.577480529830294 0.808687252328423 1 T 1 8 6.0392 0.0 0.0 0.75168 0.0 0.0 589.2857111155778 110.07318292789296 699.3588940434707 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2059771852360797 0.0 T 0.75168 - 10 + 1 2.121 68385.2 1.0 5642 3625 9258 DOHH2_400M_050219_1,9269 DOHH2_400M_050219_1,9269,YPAAGAVR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9270 53.731 800.0 60603.0 25 0 3049.7 + + -1 EEQGAVYIF 9 92 1054.5082274501667 1053.5009509835668 1 1055.511279284954 MULTI CID FTMS 0 0 0 9258 130650.3671875 1.0 0 0.0 12 Oxidation (M) _QLIM(Oxidation (M))ELYE_ ENSG00000005844|ENST00000356798|ITGAL;nc|ENSG00000005844|P20701-2|ITGAL;nc|ENSG00000005844|P20701-3|ITGAL 11.640296217721598 0.738950129755968 1 [PA]S{M(Oxidation (M))|F}EV{I|L}EY 9 -1 + 25.371 0.0 0.0 2.4083 2.4083 78.513 0.0 0.0 0.0 7.147642715192507 10.678732196748587 7.147642715192507 10.644490976677044 0 0.0 0.0 0.0 0.0 [PA]S{M(Oxidation (M))|F}EV{I|L}EY;QRR{M(Oxidation (M))|F}VWY;[PA]S{M(Oxidation (M))|F}[MN]Y[KP];[PA]S{M(Oxidation (M))|F}[MN][KP]Y;[PA]S[YN]DY[KP];[PA]S[YN]D[KP]Y;[PA]S[QT]T{[WT]|[RM]}Y;[PA]S[QT][DN]P[KP];[PA]D{I|L}{I|L}S{M(Oxidation (M))|F}EY;[PA]D{[ES]|[DT]|[{I|L}C]}[DV]P[KP] 2.4083;1.3979;1.2901;1.2901;1.123;1.123;0.99638;0.95416;0.82222;0.2531 -;-;-;-;-;-;-;-;-;- 386 1 2.121 37793.6 0.4199999868869781 5643 3625 9258 DOHH2_400M_050219_1,9270 DOHH2_400M_050219_1,9270,QLIMELYE False False EEQGAVYIF 53.730761 1055.51127928495 251338.5 9258.0 ENSG00000005844|ENST00000356798|ITGAL;;nc|ENSG00000005844|P20701-2|ITGAL;;nc|ENSG00000005844|P20701-3|ITGAL 1.9126253326733904 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9271 53.745 800.0 35498.0 25 0 1727.8 -1 0 73 983.2028686404228 0 983.2028686404228 PEAK CID FTMS 0 0 0 -1 0 13 1 M 1 -1 5.4846 0.0 0.0 0.2792 0.0 0.0 981.9797596423706 848.3604830377561 1830.3402426801267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.2792 - 15 + 1 2.121 26884.7 0.3600000143051147 5644 3625 9258 DOHH2_400M_050219_1,9271 DOHH2_400M_050219_1,9271, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9273 53.749 6.9 7131900.0 25 0 957070.0 + 9169 FGGVLILIHR 10 73 375.569541503551 1123.6867951108532 3 375.5695373415947 MULTI CID FTMS 0 0 0 9272 5716941.0 0.3538718323285093 1 -0.0976715087890625 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 1 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 86.493 0.0 0.0 7.6973 7.6973 92.18 0.0 0.0 0.0 68.58833010592525 20.597718523607966 20.597718523607966 9.208187539523747 0 0.7134679910804405 2.0 0.0 0.6505149978319906 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 7.6973;6.8778 -;- 97 + 1 2.121 45385.1 1.0 5645 3626 9272 DOHH2_400M_050219_1,9273 DOHH2_400M_050219_1,9273,FGGVLILIHR False True FGGVLILIHR 53.749394 375.569537341595 191678048.0 9272.0 ENST00000538954.5_1_9:124116937-124118409:-|nuORF 0.1564009388287862 3.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9274 53.751 17.0 3008200.0 25 0 317240.0 9172 FGGVLILIHR 10 56 562.8501503909521 1123.685747848704 2 562.8505737185478 MULTI CID FTMS 0 0 0 9272 2384925.5 0.294435883040488 1 -0.0976715087890625 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 30.63653989081413 0.2803493085145199 1 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 91.833 0.0 0.0 8.1725 8.1725 92.93 0.0 0.0 0.0 77.14001255353097 14.09256854528806 14.09256854528806 9.208187539523747 0 1.4731975075880328 2.0 0.0 0.4247425010840047 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 8.1725;7.353 -;- 126 + 1 2.121 46051.7 1.0 5646 3626 9272 DOHH2_400M_050219_1,9274 DOHH2_400M_050219_1,9274,FGGVLILIHR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9275 53.754 201.0 431600.0 25 0 52228.0 + 19231 LEHFFTLL 8 85 510.2795712835608 1018.5445896339216 2 510.2797729372978 MULTI CID FTMS 0 0 0 9272 235692.09375 1.0 0 0.0 3 Unmodified _LEHFFTLL_ REV__ENSG00000140525|ENST00000310775|FANCI;REV__nc|ENSG00000140525|Q9NVI1-1|FANCI;REV__nc|ENSG00000140525|Q9NVI1-2|FANCI 32.116972079565 0.368454113111938 1 [{I|L}T]{[DA]|[EG]}{I|L}C(Carbamidomethyl (C))T{I|L}{I|L} 9 -1 + 46.823 0.0 0.0 4.5971 4.5971 80.72 0.0 0.0 0.0 1.908774565059588 33.010840447343384 1.908774565059588 7.781512503836424 0 0.805462187404089 1.2218487496163564 0.5 0.0 [{I|L}T]{[DA]|[EG]}{I|L}C(Carbamidomethyl (C))T{I|L}{I|L};[{I|L}T]{[CP]|[EA]}VC(Carbamidomethyl (C))T{I|L}{I|L};[{I|L}T]{[DA]|[EG]}{I|L}[CG]T{I|L}{I|L};[{I|L}T]SWWT{I|L}{I|L};[{I|L}T]SA{[WS]|[C(Carbamidomethyl (C)){I|L}]}E{I|L}{I|L};[{I|L}T]{[CP]|[EA]}V[CG]T{I|L}{I|L};[MD]{[DS]|[MA]|[CV]|TT}VVK{I|L}{I|L};[{I|L}T]{[CP]|[EA]}[KC]E{I|L}{I|L};[MD]{[DS]|[MA]|[CV]|TT}VV{I|L}K{I|L} 4.5971;3.8331;3.693;3.5998;3.254;2.929;2.4813;2.4606;1.8915 -;-;-;-;-;-;-;-;- 354 1 2.121 71431.9 1.0 5647 3626 9272 DOHH2_400M_050219_1,9275 DOHH2_400M_050219_1,9275,LEHFFTLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9276 53.763 461.0 254000.0 25 0 15397.0 -1 0 103 880.8979479160886 1759.781342898977 2 880.8983032107353 MULTI CID FTMS 0 0 0 9272 201125.453125 1.0 0 0.0 4 1 AQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 10 -1 82.894 0.0 0.0 4.7105 0.0 0.0 579.1917224242694 0.0 579.1917224242694 0.0 48.69347700017573 0.0 0.0 0 1.174742501084005 0.0 0.0 1.6989700043360187 AQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 4.7105 - 898 1 2.121 84130.3 1.0 5648 3626 9272 DOHH2_400M_050219_1,9276 DOHH2_400M_050219_1,9276, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9277 53.768 320.0 216270.0 25 0 17639.0 + 32940 SELKDFFQSY 10 103 632.2985189408345 1262.5824849484688 2 632.2980834841728 MULTI CID FTMS 0 0 0 9272 202126.21875 0.7511855664535649 -1 0.1389656066894531 5 Unmodified _SELKDFFQSY_ ENSG00000145907|ENST00000356245|G3BP1 93.16586880292088 0.0091067182461363 1 {[ES]|[DT]|[{I|L}C]}{I|L}[HA]Q{I|L}SESY 11 6 + 47.533 0.0 0.0 3.7647 3.7647 75.395 0.0 0.0 0.0 7.997115584738673 30.54320326067733 7.997115584738673 4.771212547196626 0 1.8182503180159344 0.0 0.6382104921644451 0.6549471895720985 {[ES]|[DT]|[{I|L}C]}{I|L}[HA]Q{I|L}SESY;{[ES]|[DT]|[{I|L}C]}{I|L}[HA]QS{I|L}ESY;{[ES]|[DT]|[{I|L}C]}{I|L}[HA]{I|L}QSESY;{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}KQ{I|L}SESY;{[{M(Oxidation (M))|F}D]|MM}K{M(Oxidation (M))|F}Q{I|L}SESY;{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}KQS{I|L}ESY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YV]Q{I|L}SESY;{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}K{I|L}QSESY;{[ES]|[DT]|[{I|L}C]}{I|L}[HA][AG]{I|L}SESY;{[{M(Oxidation (M))|F}D]|MM}K{M(Oxidation (M))|F}QS{I|L}ESY 3.7647;3.3868;3.3091;3.0355;2.7643;2.6576;2.5808;2.5799;2.523;2.3864 -;-;-;-;-;-;-;-;-;- 1069 1 2.121 56580.3 1.0 5649 3626 9272 DOHH2_400M_050219_1,9277 DOHH2_400M_050219_1,9277,SELKDFFQSY True True SELKDFFQSY 53.768446 632.298083484173 1780540.25 9272.0 ENSG00000145907|ENST00000356245|G3BP1 8.146076520284018 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9278 53.775 359.0 77157.0 25 0 11543.0 + + 31070 RALLLGAL 8 58 413.7794052635355 825.5442575938711 2 413.7790710330009 MULTI CID FTMS 0 0 0 9272 192989.359375 1.0 0 0.0 6 Unmodified _RLLALGAI_ ENST00000281187.9_1_11:134094584-134094950:+|nuORF;ENST00000525095.2_1_11:134094621-134094950:+|nuORF 18.13498045792455 0.6430038125133779 1 {I|L}GA{I|L} 4 -1 33.404 0.0 0.0 4.0463 0.0 0.0 453.3070256244297 0.0 453.3070256244297 0.0 19.42471268044436 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}GA{I|L} 4.0463 + + 26 1 2.121 29758.7 1.0 5650 3626 9272 DOHH2_400M_050219_1,9278 DOHH2_400M_050219_1,9278,RLLALGAI False False RALLLGAL 53.77491 413.779071033001 941256.6875 9272.0 ENST00000281187.9_1_11:134094584-134094950:+|nuORF;;ENST00000525095.2_1_11:134094621-134094950:+|nuORF 0.1170048912366231 2.0 False 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_1 9279 53.78 279.0 294690.0 25 0 39416.0 + 12363 GTELGNELFY 10 90 571.7704372970418 1141.5263216608837 2 571.7711059451103 MULTI CID FTMS 0 0 0 9272 180722.828125 0.484169812764548 -1 0.1389656066894531 7 Unmodified _GTELGNELFY_ ENSG00000126821|ENST00000247225|SGPP1 46.020951573049366 0.1035046897853725 1 {[QN]|[E{I|L}]|[KN]}NG{M(Oxidation (M))|F} 5 6 30.691 0.0 0.0 2.6886 0.0 0.0 0.0 578.2462062646522 578.2462062646522 3.022562268522581 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3054621874040891 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}NG{M(Oxidation (M))|F} 2.6886 - 604 1 2.121 67789.9 1.0 5651 3626 9272 DOHH2_400M_050219_1,9279 DOHH2_400M_050219_1,9279,GTELGNELFY True True GTELGNELFY 53.780064 571.77110594511 4318610.25 9272.0 ENSG00000126821|ENST00000247225|SGPP1 5.649270693461101 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9280 53.792 692.0 74037.0 25 0 9094.8 + 20245 LLDLDEELRY 10 69 639.8319762009562 1277.6493994687123 2 639.8327514529228 MULTI CID FTMS 0 0 0 9272 147552.875 1.0 0 0.0 8 Unmodified _LLDLDEELRY_ ENSG00000119650|ENST00000314067|IFT43;ENST00000554026.5_1_14:76452129-76542971:+|nuORF;ENST00000555305.5_1_14:76452129-76548711:+|nuORF;nc|ENSG00000119650|Q96FT9-2|IFT43;nc|ENSG00000119650|Q96FT9-3|IFT43;nc|ENSG00000119650|Q96FT9-4|IFT43 29.43715596616401 0.3072975788498757 1 {I|L}{I|L}D{I|L}DEE{I|L}[YR] 10 0 + 90.394 0.0 0.0 7.075 7.075 87.634 0.0 0.0 0.0 78.17532531436136 3.177418734074564 3.177418734074564 6.53212513775344 0 0.9247425010840048 2.0 0.0 0.0 + + {I|L}{I|L}D{I|L}DEE{I|L}[YR];{I|L}{I|L}D{I|L}DEE[YR]{I|L};{I|L}{I|L}D{I|L}DEE[YG]V{I|L};{I|L}{I|L}D{I|L}DE[WY]V{I|L};{I|L}{I|L}DY{[HG]|PP}E{I|L}[YR];{I|L}{I|L}DY[WH]{I|L}[YR];{I|L}{I|L}DY{[HG]|PP}E[YR]{I|L};{I|L}{I|L}DY{[HG]|PP}E[YG]V{I|L};{I|L}{I|L}DY[WH][YR]{I|L};{I|L}{I|L}DY{[HG]|PP}[WY]V{I|L} 7.075;6.5637;6.4694;5.9547;5.4696;4.9583;4.9583;4.864;4.4471;4.3493 +;-;-;-;-;-;-;-;-;- + 307 + 1 2.121 46957.4 1.0 5652 3626 9272 DOHH2_400M_050219_1,9280 DOHH2_400M_050219_1,9280,LLDLDEELRY False True LLDLDEELRY 53.792104 639.832751452923 886231.5 9272.0 ENSG00000119650|ENST00000314067|IFT43;;nc|ENSG00000119650|Q96FT9-4|IFT43;;nc|ENSG00000119650|Q96FT9-3|IFT43;;ENST00000555305.5_1_14:76452129-76548711:+|nuORF;;ENST00000554026.5_1_14:76452129-76542971:+|nuORF;;nc|ENSG00000119650|Q96FT9-2|IFT43 8.379769802093506 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9281 53.8 464.0 212900.0 25 0 20649.0 -1 0 88 931.4214556491324 1860.8283583650648 2 931.422900378704 MULTI CID FTMS 0 0 0 9272 142014.734375 1.0 0 0.0 9 1 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 12 -1 83.938 0.0 0.0 4.5108 0.0 0.0 436.17234999824376 0.0 436.17234999824376 0.0 59.156687756324686 0.0 0.0 0 0.6677353201839438 0.0 0.0 1.2302046884880935 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 4.5108 - 650 1 2.121 72864.6 1.0 5653 3626 9272 DOHH2_400M_050219_1,9281 DOHH2_400M_050219_1,9281, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9282 53.813 738.0 177490.0 25 0 20293.0 + + 40797 VIIPKNWSL 9 120 535.3272078035952 0 535.3240844607353 PEAK CID FTMS 0 0 0 9272 98791.1171875 0.7896872179245341 -1 0.1389656066894531 10 Unmodified _VLLLLAPTTE_ ENSG00000143158|ENST00000271373|MPC2 32.30548876998284 0.1927752022612489 1 {I|L}{I|L}SWN 5 -1 31.604 0.0 0.0 2.9574 0.0 0.0 230.1705156054341 222.1249025934204 452.29541819885446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.9749073637206092 {I|L}{I|L}SWN 2.9574 - 312 + 1 2.121 104150.4 1.0 5654 3626 9272 DOHH2_400M_050219_1,9282 DOHH2_400M_050219_1,9282,VLLLLAPTTE False False VIIPKNWSL 53.813152 535.324084460735 796879.3125 9272.0 ENSG00000143158|ENST00000271373|MPC2 3.078741709391276 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9283 53.827 800.0 41824.0 25 0 7950.3 + 43303 WKRSRRRRR 9 66 452.9483789567044 1355.823307470313 3 452.9484130740166 MULTI CID FTMS 0 0 0 9272 78820.6015625 1.0 0 0.0 11 Unmodified _WKRSRRRRR_ REV__ENST00000403909.2_1_6:139660476-139660551:+|nuORF 0.5247636613948944 0.8963649302248013 1 {I|L} 1 -1 10.713 0.0 0.0 0.79017 0.0 0.0 1224.7284873792958 0.0 1224.7284873792958 0.0 7.201140738196015 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.79017 - 12 + 1 2.121 34861.4 0.3499999940395355 5655 3626 9272 DOHH2_400M_050219_1,9283 DOHH2_400M_050219_1,9283,WKRSRRRRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9284 53.842 800.0 88239.0 25 0 3028.2 -1 0 93 1076.8573645293657 3227.550264188297 3 1077.528857409954 MULTI CID FTMS 0 0 0 9272 85279.59375 0.664152298020099 -2 0.2677040100097656 12 1 Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}A 6 -1 12.484 0.0 0.0 0.38681 0.0 0.0 2168.0292203423974 353.14792810611567 2521.177148448513 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.5 Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}A 0.38681 - 175 + 1 2.121 51304.4 0.5 5656 3626 9272 DOHH2_400M_050219_1,9284 DOHH2_400M_050219_1,9284, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9286 53.854 427.0 603090.0 25 0 20105.0 -1 0 151 1164.5378607332882 3490.591752800065 3 1165.206713855267 MULTI CID FTMS 0 0 0 9285 1006056.625 1.0 0 0.0 1 1 [HD]QAEAGAQNA{M(Oxidation (M))|F}YQV{I|L}D{M(Oxidation (M))|F} 18 -1 92.793 0.0 0.0 2.6584 0.0 0.0 0.0 1482.6919474624276 1482.6919474624276 39.69232174854838 0.0 0.0 0.0 0 0.5 0.0 0.0 1.9916440611282624 [HD]QAEAGAQNA{M(Oxidation (M))|F}YQV{I|L}D{M(Oxidation (M))|F} 2.6584 - 76423 1 2.121 152100.8 1.0 5657 3627 9285 DOHH2_400M_050219_1,9286 DOHH2_400M_050219_1,9286, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9287 53.856 119.0 732920.0 25 0 116960.0 + 7854 ELLIRKLPF 9 79 564.8602241586261 1127.7058953840522 2 564.8607055544853 MULTI CID FTMS 0 0 0 9285 540063.1875 0.7511887866895185 -1 0.0976715087890625 2 Unmodified _ELLIRKLPF_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 75.76082778847304 0.0188720312721366 1 E{I|L}{I|L}{I|L}RK{I|L}{M(Oxidation (M))|F}P 9 2 + 84.951 0.0 0.0 7.5331 7.5331 95.701 0.0 0.0 0.0 73.71391389310872 10.747534640495177 10.747534640495177 22.193962872398032 0 2.110924374808178 1.6989700043360187 0.0 0.0 E{I|L}{I|L}{I|L}RK{I|L}{M(Oxidation (M))|F}P;E{I|L}{I|L}{I|L}{I|L}[RK]{M(Oxidation (M))|F}P 7.5331;5.565 -;- 147 + 1 2.121 70524.3 1.0 5658 3627 9285 DOHH2_400M_050219_1,9287 DOHH2_400M_050219_1,9287,ELLIRKLPF True True ELLIRKLPF 53.856281 564.8612 11132186.0 9285.0 ENSG00000275379|ENST00000616365|H3C11;;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000163041|ENST00000366815|H3-3A;;ENSG00000197153|ENST00000359303|H3C12;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000188375|ENST00000340398|H3-5 5.500789642333984 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9288 53.86 175.0 163080.0 25 0 10931.0 + 29015 QEDPEVQFNW 10 66 646.2827810290382 1290.5510091248764 2 646.2834350466728 MULTI CID FTMS 0 0 0 9285 326112.25 0.9482517446933172 -1 0.0976715087890625 3 Unmodified _QEDPEVQFNW_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4 31.26834338654808 0.266153677697784 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ][R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}NW 9 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ][R{M(Oxidation (M))|F}]{M(Oxidation (M))|F} + + 18.443 -0.14661 -0.015077 1.4291 1.4291 48.472 0.0 0.0 0.0 0.0 -3.9524249272868417 -3.9524249272868417 0.0 0 0.0 0.0 0.0 0.5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ][R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}NW 1.4291 - 113 + 1 2.121 26592.3 1.0 5659 3627 9285 DOHH2_400M_050219_1,9288 DOHH2_400M_050219_1,9288,QEDPEVQFNW False True QEDPEVQFNW 53.859703 646.283435046673 2191559.0 9285.0 nc|ENSG00000211892|P01861-1|IGHG4;;nc|ENSG00000211892|P01861|IGHG4 5.574200630187988 2.0 True 10.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 9289 53.874 800.0 108520.0 25 0 8778.0 + + 7341 FTDADDVAILTY 12 116 672.3223213864765 1342.6300898397528 2 672.3223144412041 MULTI CID FTMS 0 0 0 9285 99813.2734375 0.6529905827180247 -1 0.0976715087890625 4 Unmodified _EFSLIDDQLTY_ ENSG00000166848|ENST00000300086|TERF2IP 34.40172386719151 0.2986346176549658 1 [YE]AADDVA{I|L} 9 -1 53.008 0.0 0.0 3.9481 0.0 0.0 0.0 392.18473535938807 392.18473535938807 17.87790399581901 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 1.8684151806525389 0.0 [YE]AADDVA{I|L} 3.9481 - 3365 1 2.121 67515.7 0.4199999868869781 5660 3627 9285 DOHH2_400M_050219_1,9289 DOHH2_400M_050219_1,9289,EFSLIDDQLTY False False FTDADDVAILTY 53.873535 672.322314441204 1065947.875 9285.0 ENSG00000166848|ENST00000300086|TERF2IP 7.188289165496826 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9290 53.887 800.0 108500.0 25 0 5764.0 + 7007 EEIYPPEVAEF 11 96 661.8110139400337 1321.6074749468671 2 661.8114501833916 MULTI CID FTMS 0 0 0 9285 97322.265625 1.0 0 0.0 5 Unmodified _EEIYPPEVAEF_ ENSG00000145386|ENST00000274026|CCNA2 72.96794272382148 0.0238034416328542 1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L}EEAKE{M(Oxidation (M))|F} 10 7 + 54.562 0.0 0.0 4.1285 4.1285 75.284 0.0 0.0 0.0 3.549474203923729 3.549474203923729 3.549474203923729 3.549474203923729 0 0.0 0.0 0.7887254899964358 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L}EEAKE{M(Oxidation (M))|F};EE{I|L}YP[EP]VAE{M(Oxidation (M))|F};EE{I|L}Y[WH]VAE{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L}EEAV{[SA]|[TG]}{M(Oxidation (M))|F};{[HG]|PP}EVAEE{I|L}YE{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L}EAEKE{M(Oxidation (M))|F};[EP]PVAEE{I|L}YE{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A[NG]YEAKE{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AY[QA]TAKE{M(Oxidation (M))|F};EE{I|L}[PG]PE{I|L}YE{M(Oxidation (M))|F} 4.1285;3.8599;3.7557;3.6868;3.5666;3.519;3.516;3.435;3.3018;3.2911 -;+;-;-;-;-;-;-;-;- + 2259 + 1 2.121 69960.6 0.4099999964237213 5661 3627 9285 DOHH2_400M_050219_1,9290 DOHH2_400M_050219_1,9290,EEIYPPEVAEF True True EEIYPPEVAEF 53.887366 661.811450183392 652365.4375 9285.0 ENSG00000145386|ENST00000274026|CCNA2 6.794803778330485 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9291 53.901 800.0 265240.0 25 0 24027.0 + 29627 QMEPAAFQALY 11 126 634.802353455664 1267.590153978128 2 634.8024780154228 MULTI CID FTMS 0 0 0 9285 91463.921875 0.0982681630269937 -5 0.5032272338867188 6 Unmodified _QMEPAAFQALY_ ENSG00000215845|ENST00000423014|TSTD1;nc|ENSG00000215845|Q8NFU3-2|TSTD1;nc|ENSG00000215845|Q8NFU3-3|TSTD1;nc|ENSG00000215845|Q8NFU3-4|TSTD1 125.52916310638032 0.0506670691211381 1 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EAPA{M(Oxidation (M))|F}AGA{I|L}Y 12 4 + 95.07 0.0 0.0 7.5 7.5 83.504 0.0 0.0 0.0 13.251698630514554 11.382353118286233 11.382353118286233 1.8406018872695569 0 0.8182503180159344 0.744727494896694 2.3494850021680094 2.416386562212267 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EAPA{M(Oxidation (M))|F}AGA{I|L}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EAPA{M(Oxidation (M))|F}QA{I|L}Y;[AG]{M(Oxidation (M))|F}AAPEMQA{I|L}Y;[AG]MEAPA{M(Oxidation (M))|F}QA{I|L}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EAPA{M(Oxidation (M))|F}AQ{I|L}Y;[AG]{M(Oxidation (M))|F}AAPMEQA{I|L}Y;[QA]{M(Oxidation (M))|F}APEMAGA{I|L}Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAPEMAGA{I|L}Y;[QA]{M(Oxidation (M))|F}APMEAGA{I|L}Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAPMEAGA{I|L}Y 7.5;7.3548;6.4546;6.353;6.343;6.3393;6.219;6.2121;6.1037;6.0968 -;-;-;-;-;-;-;-;-;- 8450 1 2.121 169095.3 0.4000000059604645 5662 3627 9285 DOHH2_400M_050219_1,9291 DOHH2_400M_050219_1,9291,QMEPAAFQALY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9292 53.904 146.0 398770.0 25 0 19703.0 -1 0 70 958.4582131075376 1914.901873281875 2 958.4615966677666 MULTI CID FTMS 0 0 0 9285 485914.3125 0.97367105405203 -1 0.0976715087890625 7 1 [MN]PD{I|L}NAD{[QV]|[N{I|L}]|[RA]|[KV]}G 11 -1 45.895 0.0 0.0 2.3967 0.0 0.0 0.0 757.3342379205686 757.3342379205686 18.460023133071992 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 [MN]PD{I|L}NAD{[QV]|[N{I|L}]|[RA]|[KV]}G 2.3967 - 392 + 1 2.121 44537.8 1.0 5663 3627 9285 DOHH2_400M_050219_1,9292 DOHH2_400M_050219_1,9292, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9293 53.913 482.0 123910.0 25 0 11245.0 + 33055 SEQGSLQLW 9 74 1047.5124504786058 1046.505174012006 1 1047.513232409954 MULTI CID FTMS 0 0 0 9285 98200.015625 0.8365072367820351 -2 0.2366371154785156 8 Unmodified _SEQGSLQLW_ ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36 57.24910588100465 0.0276051374632116 1 {[ES]|[DT]|[{I|L}C]}QGS{I|L}Q{I|L}W 9 0 + 70.314 0.0 0.0 6.7189 6.7189 90.146 0.0 0.0 0.0 4.762036441594191 18.966160703645382 4.762036441594191 9.208187539523747 0 1.548455006504028 0.0 1.674742501084005 0.0 + + {[ES]|[DT]|[{I|L}C]}QGS{I|L}Q{I|L}W;{[ES]|[DT]|[{I|L}C]}[AG]GS{I|L}Q{I|L}W;{[ES]|[DT]|[{I|L}C]}QGS{I|L}[AG]{I|L}W;{[ES]|[DT]|[{I|L}C]}QGS{I|L}{I|L}QW;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q{I|L}SGYY;{[ES]|[DT]|[{I|L}C]}[AG]GS{I|L}[AG]{I|L}W;[Q{I|L}]W{[CA]|SS}Q{I|L}W;{[ES]|[DT]|[{I|L}C]}[AG]GS{I|L}{I|L}QW;{[ES]|[DT]|[{I|L}C]}QGS{I|L}{I|L}[AG]W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[AG]{I|L}SGYY 6.7189;5.839;5.839;5.4105;5.3368;4.9633;4.8129;4.5306;4.5306;4.4569 +;-;-;-;-;-;-;-;-;- + 764 1 2.121 47798.8 1.0 5664 3627 9285 DOHH2_400M_050219_1,9293 DOHH2_400M_050219_1,9293,SEQGSLQLW True False SEQGSLQLW 53.912728 1047.51323240995 1016899.25 9285.0 nc|ENSG00000134987|Q8NI36|WDR36;;ENSG00000134987|ENST00000513710|WDR36;;ENST00000505303.5_1_5:110428043-110447004:+|nuORF 7.53128703435262 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9295 53.923 368.0 162700.0 25 0 18047.0 + 36883 TEPPPLLVY 9 88 514.7867440831279 1027.5589352330558 2 514.7867309451103 MULTI CID FTMS 0 0 0 9294 97354.2578125 0.2477083487388911 2 -0.0857505798339843 1 Unmodified _TEPPPLLVY_ ENSG00000174231|ENST00000304992|PRPF8 38.15118350030904 0.0856056900103839 1 P{I|L}VMVY 6 6 30.45 0.0 0.0 2.9634 0.0 0.0 307.18977553535314 0.0 307.18977553535314 0.0 13.460696996448576 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.0 P{I|L}VMVY 2.9634 - 213 1 2.121 50401.9 1.0 5665 3628 9294 DOHH2_400M_050219_1,9295 DOHH2_400M_050219_1,9295,TEPPPLLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9296 53.928 267.0 439600.0 25 0 48912.0 + 5167 DILKRLYEL 9 102 581.8449772327551 1161.6754015323102 2 581.8452026247978 MULTI CID FTMS 0 0 0 9294 234065.4375 0.4657520174613152 -3 0.3070869445800781 2 Unmodified _DILKRLYEL_ ENSG00000106305|ENST00000223029|AIMP2 60.899326713953855 0.0255841537240836 1 {I|L}D{I|L}K 4 7 61.67 0.0 0.0 5.3087 0.0 0.0 0.0 689.3634002329666 689.3634002329666 42.69077524932108 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5 0.3494850021680094 {I|L}D{I|L}K 5.3087 - 359 + 1 2.121 92711.3 1.0 5666 3628 9294 DOHH2_400M_050219_1,9296 DOHH2_400M_050219_1,9296,DILKRLYEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9297 53.942 800.0 180370.0 25 0 26472.0 + 38706 TTSHLMGMFY 10 145 594.2641355221406 1186.513718111081 2 594.2651855349541 MULTI CID FTMS 0 0 0 9294 126443.5859375 1.0 0 0.0 3 Unmodified _TTSHLMGMFY_ ENSG00000168496|ENST00000305885|FEN1 58.6788170122104 0.0400518768368984 1 [HS]{I|L}TTMGM{M(Oxidation (M))|F}Y 10 4 + 67.061 0.0 0.0 5.652 5.652 80.843 0.0 0.0 0.0 3.755697080001788 3.755697080001788 3.755697080001788 3.755697080001788 0 0.5 0.7958800173440752 1.6758337024346173 0.0 [HS]{I|L}TTMGM{M(Oxidation (M))|F}Y;[QA]EMGMTTRY;[HS]{I|L}MTTGM{M(Oxidation (M))|F}Y;[H{I|L}]STTMGM{M(Oxidation (M))|F}Y;{[DS]|[MA]|[CV]|TT}[HS]{I|L}MGM{M(Oxidation (M))|F}Y;[HS]{I|L}MGTTM{M(Oxidation (M))|F}Y;[HS]{I|L}TMTGM{M(Oxidation (M))|F}Y;[QA]EMGTTMRY;[HS]{I|L}MTGTM{M(Oxidation (M))|F}Y;[HS]{M(Oxidation (M))|F}PTTGM{M(Oxidation (M))|F}Y 5.652;5.3354;4.9426;4.8759;4.8216;4.7555;4.6889;4.626;4.5835;4.5723 -;-;-;-;+;-;-;-;-;- + 4450 1 2.121 111251.1 0.4900000095367431 5667 3628 9294 DOHH2_400M_050219_1,9297 DOHH2_400M_050219_1,9297,TTSHLMGMFY True True TTSHLMGMFY 53.942028 594.265185534954 767174.9375 9294.0 ENSG00000168496|ENST00000305885|FEN1 7.71974515914917 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9299 53.958 800.0 35081.0 25 0 1991.6 -1 0 53 1052.8499610592105 3155.528053777831 3 1053.182666003704 MULTI CID FTMS 0 0 0 -1 0 1 1 H{[CT]|[{M(Oxidation (M))|F}G]}PM{NN|[MP]|[D{I|L}]|[EV]} 7 -1 18.996 0.0 0.0 0.602 0.0 0.0 2340.120017227512 0.0 2340.120017227512 0.0 7.569619513137056 0.0 0.0 0 0.0 0.0 0.0 0.0 H{[CT]|[{M(Oxidation (M))|F}G]}PM{NN|[MP]|[D{I|L}]|[EV]} 0.602 - 54 1 2.121 25802.9 0.5699999928474426 5668 3629 9298 DOHH2_400M_050219_1,9299 DOHH2_400M_050219_1,9299, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9300 53.971 710.0 222900.0 25 0 24828.0 + 5169 DILKRLYEL 9 137 388.2327410970216 1161.676393891265 3 388.2326843142509 MULTI CID FTMS 0 0 0 9298 142228.921875 0.7196350662843856 -1 0.0293006896972656 2 Unmodified _DILKRLYEL_ ENSG00000106305|ENST00000223029|AIMP2 32.037481411007896 0.1235546156350648 1 {NN|[MP]|[D{I|L}]|[EV]}[KP][HV]{I|L}{I|L}D{I|L} 10 5 + 50.436 0.0 0.0 4.3417 4.3417 84.039 0.0 0.0 0.0 7.503406882387225 21.668497772343898 7.503406882387225 12.608856984453348 0 0.8494850021680094 2.0 0.6747425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KP][HV]{I|L}{I|L}D{I|L};{[QN]|[E{I|L}]|[KN]}[YR]K{I|L}{I|L}D{I|L};[K{I|L}][YR]E{I|L}{I|L}D{I|L};[K{I|L}][YR]{I|L}E{I|L}D{I|L};{[QN]|[E{I|L}]|[KN]}[YR]{I|L}K{I|L}D{I|L};[K{I|L}][R{I|L}]YE{I|L}D{I|L};[C(Carbamidomethyl (C))K]V{I|L}HHKK{I|L};[K{I|L}][DP][HV]{I|L}{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}{I|L}K{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))R];[{M(Oxidation (M))|F}V]{I|L}K{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))R] 4.3417;3.2563;3.0748;2.5148;2.228;2.1041;2.0187;1.5546;0.87144;0.14396 -;-;-;-;-;-;-;-;-;- 441 1 2.121 126058.8 1.0 5669 3629 9298 DOHH2_400M_050219_1,9300 DOHH2_400M_050219_1,9300,DILKRLYEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9301 53.985 800.0 165800.0 25 0 6739.3 + 12365 GTELGNELFY 10 116 1142.5351584649436 1141.5278819983437 1 1142.534106433392 MULTI CID FTMS 0 0 0 9298 176798.75 0.4698613020688212 2 -0.0605087280273437 3 Unmodified _GTELGNELFY_ ENSG00000126821|ENST00000247225|SGPP1 74.19965305603844 0.0188013450058842 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}G{[SA]|[TG]}E{I|L}{M(Oxidation (M))|F}Y 10 4 + 70.864 0.0 0.0 6.2078 6.2078 78.842 0.0 0.0 0.0 3.0102999566398125 14.999999999999991 3.0102999566398125 0.7788762852168958 0 0.3494850021680094 0.0 1.7544321917401078 2.2614393726401687 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}G{[SA]|[TG]}E{I|L}{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GE{[SA]|[TG]}{I|L}{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}NG{[SA]|[TG]}E{I|L}{M(Oxidation (M))|F}Y;[NG]E{I|L}{[SA]|[TG]}E{I|L}{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}NGE{[SA]|[TG]}{I|L}{M(Oxidation (M))|F}Y;[NG]E{I|L}E{[SA]|[TG]}{I|L}{M(Oxidation (M))|F}Y;{[SA]|[TG]}E{I|L}[NG]E{I|L}{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}G{I|L}{[SA]|[TG]}E{I|L}{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}G{[SA]|[TG]}E{M(Oxidation (M))|F}{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}G{I|L}E{[SA]|[TG]}{I|L}{M(Oxidation (M))|F}Y 6.2078;6.1396;5.9441;5.9229;5.8759;5.8547;5.7402;5.6592;5.6055;5.591 -;-;-;-;-;-;+;-;-;- + 5603 1 2.121 83757.1 0.7099999785423279 5670 3629 9298 DOHH2_400M_050219_1,9301 DOHH2_400M_050219_1,9301,GTELGNELFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9302 53.998 800.0 39278.0 25 0 2474.0 -1 0 65 1052.1851388197974 3153.5335870595927 3 1052.845263659954 MULTI CID FTMS 0 0 0 9298 19895.578125 0.0810668491755268 4 -0.1432838439941406 4 1 [MN][YN]{[QC]|[C(Carbamidomethyl (C))A]}R 7 -1 7.4642 0.0 0.0 0.23669 0.0 0.0 0.0 2241.147514632112 2241.147514632112 0.4744693677107401 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MN][YN]{[QC]|[C(Carbamidomethyl (C))A]}R 0.23669 - 32 1 2.121 28397.5 0.5400000214576721 5671 3629 9298 DOHH2_400M_050219_1,9302 DOHH2_400M_050219_1,9302, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9305 54.007 80.0 984840.0 25 0 132690.0 + 9170 FGGVLILIHR 10 89 375.569541503551 1123.6867951108532 3 375.5694457888603 MULTI CID FTMS 0 0 0 9304 739243.75 0.0457583068200106 6 -0.2212753295898437 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 1 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 88.809 0.0 0.0 7.9033 7.9033 92.542 0.0 0.0 0.0 75.60886448696975 21.66747660373167 21.66747660373167 9.208187539523747 0 0.75 2.0 0.0 0.6694451763165201 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 7.9033;7.0839 -;- 117 + 1 2.121 70465.2 1.0 5672 3631 9304 DOHH2_400M_050219_1,9305 DOHH2_400M_050219_1,9305,FGGVLILIHR False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9306 54.01 118.0 677460.0 25 0 42908.0 + 23417 LTELPDWSY 9 97 562.2687214603412 1122.5228899874824 2 562.2691528201103 MULTI CID FTMS 0 0 0 9304 363665.96875 0.5467969979358812 -3 0.0898094177246093 2 Unmodified _LTELPDWSY_ chr14:22830254-22830419|27|46.37|0.79|5.87|+|2|MRPL52,None|1;ENSG00000172590|ENST00000397496|MRPL52;ENST00000311892.10_1_14:23299153-23300177:+|nuORF;ENST00000553482.5_1_14:23299112-23299471:+|nuORF;ENST00000557543.5_1_14:23299153-23299471:+|nuORF;nc|ENSG00000172590|Q86TS9-4|MRPL52;nc|ENSG00000172590|Q86TS9|MRPL52 50.855029805455786 0.0384952370514206 1 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 7 8 42.159 0.0 0.0 3.7558 0.0 0.0 210.98787070968768 0.0 210.98787070968768 0.0 14.03359860222922 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 3.7558 - 312 + 1 2.121 64585.8 1.0 5673 3631 9304 DOHH2_400M_050219_1,9306 DOHH2_400M_050219_1,9306,LTELPDWSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9307 54.022 672.0 261580.0 25 0 6567.1 + -1 VESPLSVSF 9 148 964.9651723394356 1927.915791745671 2 964.9674560427666 MULTI CID FTMS 0 0 0 9304 146639.1875 0.8542899338262442 -1 0.004058837890625 3 ENSG00000145916|ENST00000313386|RMND5B;ENSG00000153561|ENST00000283632|RMND5A;nc|ENSG00000145916|Q96G75-2|RMND5B;ENST00000515360.5_1_5:177569546-177575030:+|nuORF 1 [MN]PN{I|L}NEA{M(Oxidation (M))|F}WVESVD 15 -1 95.37 0.0 0.0 4.9468 0.0 0.0 0.0 179.11943994693596 179.11943994693596 34.209117153848624 0.0 0.0 0.0 0 0.9049471895720984 1.6989700043360187 2.40051499783199 0.4247425010840047 [MN]PN{I|L}NEA{M(Oxidation (M))|F}WVESVD 4.9468 - 240088 + 1 2.121 115818.8 1.0 5674 3631 9304 DOHH2_400M_050219_1,9307 DOHH2_400M_050219_1,9307, False False VESPLSVSF 54.021519 964.967456042767 1354406.625 9304.0 ENSG00000145916|ENST00000313386|RMND5B;;ENSG00000153561|ENST00000283632|RMND5A;;nc|ENSG00000145916|Q96G75-2|RMND5B;;ENST00000515360.5_1_5:177569546-177575030:+|nuORF 4.112576405207316 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9308 54.035 762.0 198230.0 25 0 15727.0 + 7249 EESLRTYLF 9 134 579.295008260319 1156.575463587438 2 579.2948486208916 MULTI CID FTMS 0 0 0 9304 109783.953125 0.6670748831508401 -2 0.0605087280273437 4 Unmodified _EESLRTYLF_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 74.19965305603844 0.0194755241623067 1 EE{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F} 9 5 + 49.179 0.0 0.0 4.2521 4.2521 84.755 0.0 0.0 0.0 10.566431890060102 4.047794332023429 4.047794332023429 17.02075594855752 0 1.079689690656103 1.6989700043360187 0.0 0.0 EE{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F};[DP]Q{I|L}[YV]Y{I|L}{M(Oxidation (M))|F};E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[WR]{I|L}{M(Oxidation (M))|F};E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}{[NV]|[RG]}E{I|L}{M(Oxidation (M))|F};[{I|L}T]{[DS]|[MA]|[CV]|TT}[TP]TY{I|L}{M(Oxidation (M))|F};E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F};[NP]{I|L}Y[YV]E{I|L}{M(Oxidation (M))|F};[AG][DP]{I|L}[YV]Y{I|L}{M(Oxidation (M))|F};[DP][AG]{I|L}[YV]Y{I|L}{M(Oxidation (M))|F};[NP]{I|L}[HV]{[CT]|[{M(Oxidation (M))|F}G]}RA{M(Oxidation (M))|F} 4.2521;2.7804;2.4993;2.3866;2.3523;2.3287;2.2343;1.9844;1.9843;1.9759 -;-;-;-;-;-;-;-;-;- 1259 + 1 2.121 115563.7 1.0 5675 3631 9304 DOHH2_400M_050219_1,9308 DOHH2_400M_050219_1,9308,EESLRTYLF True True EESLRTYLF 54.034715 579.294848620892 892067.375 9304.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 7.525593280792236 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9309 54.049 800.0 153670.0 25 0 8206.0 -1 0 114 903.4138324355038 1804.813111937808 2 903.4153930544852 MULTI CID FTMS 0 0 0 9304 91337.15625 0.7222875655879142 -2 0.0605087280273437 5 1 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}YE[{I|L}V] 15 -1 + 94.624 0.0 0.0 5.2429 5.2429 80.329 0.0 0.0 0.0 5.445312593723983 6.39783004572206 5.445312593723983 4.771212547196626 0 0.0 1.3979400086720375 0.4247425010840047 1.035666875892183 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}YE[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQENA{M(Oxidation (M))|F}YE[{I|L}V];[YQ]VCEAQQDA{M(Oxidation (M))|F}YE[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEA[AG]QDA{M(Oxidation (M))|F}YE[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQ[AG]DA{M(Oxidation (M))|F}YE[{I|L}V];[YQ]VCEAQENA{M(Oxidation (M))|F}YE[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQW{M(Oxidation (M))|F}YE[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEA[AG]ENA{M(Oxidation (M))|F}YE[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQEGGA{M(Oxidation (M))|F}YE[{I|L}V];[YQ]VCEAQ[AG]DA{M(Oxidation (M))|F}YE[{I|L}V] 5.2429;4.9785;4.9412;4.7425;4.7425;4.6768;4.6369;4.4782;4.4782;4.4408 -;-;-;-;-;-;-;-;-;- 3831 1 2.121 90593.6 0.4399999976158142 5676 3631 9304 DOHH2_400M_050219_1,9309 DOHH2_400M_050219_1,9309, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9311 54.065 800.0 95256.0 25 0 6269.6 12364 GTELGNELFY 10 124 571.7704372970418 1141.5263216608837 2 571.7701904177666 MULTI CID FTMS 0 0 0 9310 55014.90625 0.14738899968906 5 -0.1752548217773437 1 Unmodified _GTELGNELFY_ ENSG00000126821|ENST00000247225|SGPP1 17.11289562659939 0.5604042439455784 1 {I|L}KRR{M(Oxidation (M))|F}Y 6 7 20.891 0.0 0.0 1.8301 0.0 0.0 259.9844403157519 0.0 259.9844403157519 0.0 2.066081566279575 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}KRR{M(Oxidation (M))|F}Y 1.8301 - 255 + 1 2.121 61378.4 0.4199999868869781 5677 3632 9310 DOHH2_400M_050219_1,9311 DOHH2_400M_050219_1,9311,GTELGNELFY False True EMLKKFLSF 54.064934 571.770190417767 192928.515625 9310.0 nc|ENSG00000062650|Q7Z5K2-3|WAPL;;nc|ENSG00000062650|Q7Z5K2-2|WAPL;;ENSG00000062650|ENST00000298767|WAPL 3.3091150522232056 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9312 54.079 800.0 104290.0 25 0 33990.0 31176 RLPHWRRRGRR 11 90 515.9783106952756 1544.9131026860266 3 515.9780761599541 MULTI CID FTMS 0 0 0 9310 97120.03125 0.7019798516054319 -2 0.050079345703125 2 Unmodified _RLPHWRRRGRR_ ENST00000250894.8_2_16:1818305-1818896:+|nuORF 0.0833504608790944 0.8747546825782322 1 V 1 11 10.181 0.0 0.0 0.65901 0.0 0.0 1427.8336176780172 0.0 1427.8336176780172 0.0 0.1810608632722221 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.65901 - 62 + 1 2.121 81058.0 0.9900000095367432 5678 3632 9310 DOHH2_400M_050219_1,9312 DOHH2_400M_050219_1,9312,RLPHWRRRGRR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9313 54.085 362.0 89838.0 25 0 34994.0 + -1 KRLLLFQCRRR 11 48 773.4639891388435 1544.913425344487 2 773.4630615115166 MULTI CID FTMS 0 0 0 9310 92002.578125 1.0 0 0.0 3 Carbamidomethyl (C) _KRLLLFQC(Carbamidomethyl (C))RRR_ REV__ENST00000342992.10_3_2:179542611-179544107:-|nuORF 0.3070304955306653 0.8736993455979228 1 R 1 -1 0.088644 0.0 0.0 0.0057378 0.0 0.0 1262.7455003950713 123.04586969547108 1385.7913700905424 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.0057378 + + 1 + 1 2.121 37778.7 1.0 5679 3632 9310 DOHH2_400M_050219_1,9313 DOHH2_400M_050219_1,9313,KRLLLFQCRRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9315 54.094 278.0 97708.0 25 0 5393.5 -1 0 60 1187.8895378580837 0 1187.892626941204 PEAK CID FTMS 0 0 0 9314 73814.03125 0.5857835125945803 1 -0.0410346984863281 1 1 R{M(Oxidation (M))|F}M 3 -1 5.9518 0.0 0.0 0.25073 0.0 0.0 1212.244943780817 724.3002413385374 1936.5451851193543 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R{M(Oxidation (M))|F}M 0.25073 - 11 + 1 2.121 22001.6 1.0 5680 3633 9314 DOHH2_400M_050219_1,9315 DOHH2_400M_050219_1,9315, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9316 54.102 422.0 180040.0 25 0 15963.0 -1 0 89 1092.5258259840675 2183.037099034935 2 1092.525439441204 MULTI CID FTMS 0 0 0 9314 67449.171875 0.2760439061510816 -12 0.7941093444824219 2 1 [QP][QT]PPPP 8 -1 48.193 0.0 0.0 2.2076 0.0 0.0 0.0 1337.583142612339 1337.583142612339 29.80327215271494 0.0 0.0 0.0 0 1.0 0.0 0.0 1.579689690656103 [QP][QT]PPPP 2.2076 - 1381 1 2.121 53518.4 1.0 5681 3633 9314 DOHH2_400M_050219_1,9316 DOHH2_400M_050219_1,9316, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9317 54.112 603.0 37199.0 25 0 2381.0 -1 0 60 1074.5091753690572 0 1074.375415027142 PEAK CID FTMS 0 0 0 9314 17096.40234375 0.3540903304810399 -1 0.0367546081542968 3 1 VA 2 -1 7.9588 0.0 0.0 0.37069 0.0 0.0 1533.717983451202 440.1578768365844 1973.8758602877865 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA 0.37069 - 7 + 1 2.121 26981.3 1.0 5682 3633 9314 DOHH2_400M_050219_1,9317 DOHH2_400M_050219_1,9317, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9318 54.126 800.0 111360.0 25 0 25010.0 -1 0 87 1161.207690417767 0 1161.207690417767 PEAK CID FTMS 0 0 0 -1 0 4 1 A 1 -1 4.6041 0.0 0.0 0.19842 0.0 0.0 1088.8752674548716 1157.4533488695522 2246.328616324424 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.19842 - 1 + 1 2.121 58209.5 0.5099999904632568 5683 3633 9314 DOHH2_400M_050219_1,9318 DOHH2_400M_050219_1,9318, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9320 54.135 352.0 307770.0 25 0 45823.0 + 7855 ELLIRKLPF 9 98 564.8602241586261 1127.7058953840522 2 564.8607665896416 MULTI CID FTMS 0 0 0 9319 196855.15625 0.2738112676435904 6 -0.1317558288574218 1 Unmodified _ELLIRKLPF_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 72.96794272382148 0.0199516581995792 1 E{I|L}{I|L}{I|L}RK{I|L}P{M(Oxidation (M))|F} 9 0 + 75.249 0.0 0.0 6.6728 6.6728 81.568 0.0 0.0 0.0 1.7917469282411247 1.7917469282411247 1.7917469282411247 1.7917469282411247 0 2.397940008672037 1.6989700043360187 0.0 0.0 + + E{I|L}{I|L}{I|L}RK{I|L}P{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}RK{I|L}P{M(Oxidation (M))|F} 6.6728;6.5139 +;+ + 149 + 1 2.121 87618.3 1.0 5684 3634 9319 DOHH2_400M_050219_1,9320 DOHH2_400M_050219_1,9320,ELLIRKLPF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9321 54.148 729.0 156120.0 25 0 18206.0 + 7208 EEQPQGWVSW 10 111 623.2803527221785 1244.5461525111568 2 623.2805663943291 MULTI CID FTMS 0 0 0 9319 144150.5625 0.8640753747721246 -5 0.1843185424804687 2 Unmodified _EEQPQGWVSW_ ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-4|VPS13B;nc|ENSG00000132549|Q7Z7G8-5|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B 61.60191391372663 0.0323840705564037 1 [AG]PGWE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VSW 11 7 + 50.582 0.0 0.0 4.0643 4.0643 75.721 0.0 0.0 0.0 4.20057299726264 10.15373030631185 4.20057299726264 4.20057299726264 0 1.1237125054200234 2.0 1.079689690656103 0.0 [AG]PGWE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VSW;[QP]GWE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VSW;[QP]GWVE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SW;[AG]PGWVE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SW;[AG]YV{[YD]|[{M(Oxidation (M))|F}M]}WVSW;[YQ]VW{[YD]|[{M(Oxidation (M))|F}M]}VSW;[AG]EE[HV][MT]VSW;[AG]PGWEV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SW;[AG]PQ[WE]{[DA]|[EG]}VSW;EEQ[HV][MT]VSW 4.0643;3.7268;3.592;3.5883;3.2515;3.2484;3.1978;3.1296;2.9399;2.8436 -;-;-;-;-;-;-;-;-;- 2328 1 2.121 87593.6 1.0 5685 3634 9319 DOHH2_400M_050219_1,9321 DOHH2_400M_050219_1,9321,EEQPQGWVSW True True EEQPQGWVSW 54.147906 623.280566394329 1285008.125 9319.0 nc|ENSG00000132549|Q7Z7G8-3|VPS13B;;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;;nc|ENSG00000132549|Q7Z7G8-5|VPS13B;;ENSG00000132549|ENST00000357162|VPS13B;;nc|ENSG00000132549|Q7Z7G8|VPS13B;;nc|ENSG00000132549|Q7Z7G8-4|VPS13B 7.338062763214111 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9322 54.16 680.0 196830.0 25 0 22809.0 + 14316 IENPALLRW 9 106 556.3165013313196 1110.6184497294391 2 556.3167602419853 MULTI CID FTMS 0 0 0 9319 99010.75 0.8553018978324851 -1 0.0410346984863281 3 Unmodified _IENPALLRW_ ENSG00000065518|ENST00000184266|NDUFB4;nc|ENSG00000065518|O95168-2|NDUFB4 75.76082778847304 0.0188720312721366 1 {I|L}ENPA{I|L}{I|L}RW 9 0 + 100.91 0.0 0.0 9.0863 9.0863 93.77 0.0 0.0 0.0 85.79708675899667 12.587418566968154 12.587418566968154 9.208187539523747 0 1.25 1.6989700043360187 0.3807196863200844 0.805462187404089 + + {I|L}ENPA{I|L}{I|L}RW;{I|L}EGGPA{I|L}{I|L}RW;{I|L}{M(Oxidation (M))|F}[YT]{I|L}{I|L}RW;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HQ]{I|L}{I|L}RW;{I|L}{M(Oxidation (M))|F}WNKK{I|L}Y;[NP]A{I|L}[R{I|L}]WE{I|L};{I|L}{M(Oxidation (M))|F}WGGKK{I|L}Y;[PA]N{I|L}[R{I|L}]WE{I|L};[PA]{I|L}N[R{I|L}]WE{I|L};[PA]{I|L}[R{I|L}]NWE{I|L} 9.0863;8.2572;3.3883;2.1232;2.0595;1.3245;1.2255;0.91181;0.4811;0.34668 +;-;-;-;-;-;-;-;-;- + 381 + 1 2.121 105097.0 1.0 5686 3634 9319 DOHH2_400M_050219_1,9322 DOHH2_400M_050219_1,9322,IENPALLRW True True IENPALLRW 54.159741 556.316760241985 758358.9375 9319.0 ENSG00000065518|ENST00000184266|NDUFB4;;nc|ENSG00000065518|O95168-2|NDUFB4 7.345233917236328 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9324 54.165 63.0 845020.0 25 0 93615.0 + 29628 QMEPAAFQALY 11 68 634.802353455664 1267.590153978128 2 634.8029662966728 MULTI CID FTMS 0 0 0 9323 575283.875 0.6180807520211172 3 -0.0679512023925781 1 Unmodified _QMEPAAFQALY_ ENSG00000215845|ENST00000423014|TSTD1;nc|ENSG00000215845|Q8NFU3-2|TSTD1;nc|ENSG00000215845|Q8NFU3-3|TSTD1;nc|ENSG00000215845|Q8NFU3-4|TSTD1 114.20165948288296 0.0227281746564865 1 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[PA]A{M(Oxidation (M))|F}QA{I|L}Y 11 0 + 83.615 0.0 0.0 6.5964 6.5964 88.482 0.0 0.0 0.0 22.746437418586552 11.30266382157349 11.30266382157349 9.128498242811006 0 0.8182503180159344 1.0969100130080565 2.1883753548010496 1.8098943791441968 + + {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[PA]A{M(Oxidation (M))|F}QA{I|L}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[PA]A{M(Oxidation (M))|F}[AG]A{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQ{M(Oxidation (M))|F}A{[{M(Oxidation (M))|F}D]|MM}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQ{M(Oxidation (M))|F}E{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A[AG]{M(Oxidation (M))|F}A{[{M(Oxidation (M))|F}D]|MM}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A[AG]{M(Oxidation (M))|F}E{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[PA]A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[HC]KQA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[PA]{[TV]|[{I|L}S]}QA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[HC]K[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 6.5964;5.8762;4.8019;4.6366;3.7438;3.5785;3.0306;2.3838;2.2171;1.6608 +;-;-;-;-;-;-;-;-;- + 376 1 2.121 51961.0 1.0 5687 3635 9323 DOHH2_400M_050219_1,9324 DOHH2_400M_050219_1,9324,QMEPAAFQALY True True QMEPAAFQALY 54.164541 634.802966296673 13681633.0 9323.0 nc|ENSG00000215845|Q8NFU3-3|TSTD1;;nc|ENSG00000215845|Q8NFU3-2|TSTD1;;ENSG00000215845|ENST00000423014|TSTD1;;nc|ENSG00000215845|Q8NFU3-4|TSTD1 7.328197956085205 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9325 54.178 800.0 199450.0 25 0 6921.3 -1 0 147 1164.5378607332882 3490.591752800065 3 1164.873095691204 MULTI CID FTMS 0 0 0 9323 217162.875 0.2139824406112918 8 -0.1553115844726562 2 1 ED{I|L}VQY{M(Oxidation (M))|F}ANQQAED 14 -1 88.732 0.0 0.0 2.542 0.0 0.0 1503.732519783044 333.1311434381469 1836.8636632211908 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 1.0994850021680094 ED{I|L}VQY{M(Oxidation (M))|F}ANQQAED 2.542 - 17274 + 1 2.121 97041.9 0.9300000071525574 5688 3635 9323 DOHH2_400M_050219_1,9325 DOHH2_400M_050219_1,9325, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9326 54.192 800.0 85793.0 25 0 4281.0 -1 SVYMAGVL 8 101 855.4247916450303 854.4175151784302 1 855.4229614138603 MULTI CID FTMS 0 0 0 9323 72612.6875 0.2459207956315198 4 -0.0942764282226562 3 Oxidation (M) _SVYM(Oxidation (M))AGVL_ ENST00000525264.5_1_11:64981802-64993164:+|nuORF;nc|ENSG00000197847|A6NK97-2|SLC22A20P;nc|ENSG00000197847|A6NK97|SLC22A20P 19.438996006549623 0.6237395211498085 1 YQV{I|L} 4 -1 45.79 0.0 0.0 5.3592 0.0 0.0 333.1330144120606 0.0 333.1330144120606 0.0 29.23516269895728 0.0 0.0 0 0.5796896906561032 0.0 0.0 0.805462187404089 YQV{I|L} 5.3592 - 445 1 2.121 52045.7 0.4199999868869781 5689 3635 9323 DOHH2_400M_050219_1,9326 DOHH2_400M_050219_1,9326,SVYMAGVL False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_1 9328 54.21 800.0 177590.0 25 0 13555.0 + 5168 DILKRLYEL 9 131 581.8449772327551 1161.6754015323102 2 581.8459350466728 MULTI CID FTMS 0 0 0 9327 73705.0 0.1466609201838534 5 -0.0811500549316406 1 Unmodified _DILKRLYEL_ ENSG00000106305|ENST00000223029|AIMP2 51.76506608216692 0.0364999419761865 1 {I|L}D{I|L}E 4 6 66.208 0.0 0.0 5.6993 0.0 0.0 0.0 688.4266451471311 688.4266451471311 50.190775249321085 0.0 0.0 0.0 0 0.75 2.0 1.0994850021680094 0.0 {I|L}D{I|L}E 5.6993 - 218 + 1 2.121 109630.0 0.4000000059604645 5690 3636 9327 DOHH2_400M_050219_1,9328 DOHH2_400M_050219_1,9328,DILKRLYEL True True DILKRLYEL 54.209964 581.845935046673 5215435.0 9327.0 ENSG00000106305|ENST00000223029|AIMP2 5.60597292582194 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9329 54.224 800.0 110260.0 25 0 8533.6 -1 0 93 909.426790016155 1816.83902709911 2 909.9273559451104 MULTI CID FTMS 0 0 0 9327 98397.328125 1.0 0 0.0 2 1 {[QV]|[N{I|L}]|[RA]|[KV]}Y[MD]AQQNA{M(Oxidation (M))|F}Y 12 -1 65.06 0.0 0.0 3.5809 0.0 0.0 0.0 355.1947818489136 355.1947818489136 45.85138771613167 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}Y[MD]AQQNA{M(Oxidation (M))|F}Y 3.5809 - 1473 1 2.121 63986.3 0.4900000095367431 5691 3636 9327 DOHH2_400M_050219_1,9329 DOHH2_400M_050219_1,9329, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9332 54.243 732.0 191560.0 25 0 20794.0 + 6460 EAFLKHILSV 10 154 578.8396402506189 1155.6647275680375 2 578.8398315310478 MULTI CID FTMS 0 0 0 9331 95621.359375 0.4171972101533033 -6 0.1791496276855468 1 Unmodified _EAFLKHILSV_ ENSG00000196465|ENST00000695999|MYL6B;ENST00000548548.1_1_12:56551205-56551507:+|nuORF;ENST00000549178.5_1_12:56548807-56551507:+|nuORF 104.48436234954404 0.0061796757808163 1 [H{I|L}]K{I|L}S{M(Oxidation (M))|F}{I|L}{I|L}SV 10 5 + 69.229 0.0 0.0 5.9904 5.9904 77.145 0.0 0.0 0.0 0.128230215307056 14.14651886415512 0.128230215307056 0.128230215307056 0 1.1505149978319906 0.9208187539523752 1.8494850021680087 0.0 [H{I|L}]K{I|L}S{M(Oxidation (M))|F}{I|L}{I|L}SV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}KH{I|L}{I|L}SV;{[CP]|[EA]}{M(Oxidation (M))|F}{I|L}KH{I|L}{I|L}SV;[H{I|L}]{I|L}KS{M(Oxidation (M))|F}{I|L}{I|L}SV;[H{I|L}]K{I|L}{M(Oxidation (M))|F}{[CP]|[EA]}{I|L}SV;[H{I|L}]KS{I|L}{M(Oxidation (M))|F}{I|L}{I|L}SV;{I|L}{I|L}HKS{M(Oxidation (M))|F}{I|L}{I|L}SV;[H{I|L}]K{I|L}{M(Oxidation (M))|F}{I|L}{[CP]|[EA]}SV;[H{I|L}]{I|L}K{M(Oxidation (M))|F}{[CP]|[EA]}{I|L}SV;[{M(Oxidation (M))|F}T]V{I|L}KH{I|L}{I|L}SV 5.9904;5.9793;5.8718;5.5775;5.224;5.0892;4.9243;4.8283;4.8111;4.7924 -;-;+;-;-;-;-;-;-;- + 2797 1 2.121 107236.9 1.0 5692 3638 9331 DOHH2_400M_050219_1,9332 DOHH2_400M_050219_1,9332,EAFLKHILSV True True EAFLKHILSV 54.242945 578.839831531048 1097564.625 9331.0 ENST00000548548.1_1_12:56551205-56551507:+|nuORF;;ENST00000549178.5_1_12:56548807-56551507:+|nuORF;;ENSG00000196465|ENST00000695999|MYL6B 6.816226164499919 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9333 54.254 634.0 34733.0 25 0 2022.0 -1 0 60 873.7826662417332 0 873.7831298708916 PEAK CID FTMS 0 0 0 9331 68197.1484375 1.0 0 0.0 2 1 Y 1 -1 4.6041 0.0 0.0 0.26376 0.0 0.0 1000.6570550403038 578.8206270807249 1579.4776821210287 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.26376 - 1 + 1 2.121 25032.2 1.0 5693 3638 9331 DOHH2_400M_050219_1,9333 DOHH2_400M_050219_1,9333, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9336 54.263 112.0 524010.0 25 0 46520.0 + 23418 LTELPDWSY 9 85 562.2687214603412 1122.5228899874824 2 562.2690307497978 MULTI CID FTMS 0 0 0 9335 420060.40625 0.6315899446921418 6 -0.2848701477050781 1 Unmodified _LTELPDWSY_ chr14:22830254-22830419|27|46.37|0.79|5.87|+|2|MRPL52,None|1;ENSG00000172590|ENST00000397496|MRPL52;ENST00000311892.10_1_14:23299153-23300177:+|nuORF;ENST00000553482.5_1_14:23299112-23299471:+|nuORF;ENST00000557543.5_1_14:23299153-23299471:+|nuORF;nc|ENSG00000172590|Q86TS9-4|MRPL52;nc|ENSG00000172590|Q86TS9|MRPL52 60.38955033654506 0.025866396858536 1 [{I|L}T]E{I|L} 4 5 33.716 0.0 0.0 3.0036 0.0 0.0 0.0 663.2418285463292 663.2418285463292 -1.4735426686651465 0.0 -1.4735426686651465 0.0 0 0.5 1.154901959985743 1.1505149978319906 0.0 + [{I|L}T]E{I|L} 3.0036 + + 234 1 2.121 47706.6 1.0 5694 3640 9335 DOHH2_400M_050219_1,9336 DOHH2_400M_050219_1,9336,LTELPDWSY True True LTELPDWSY 54.263011 562.269030749798 5060460.0 9335.0 ENST00000311892.10_1_14:23299153-23300177:+|nuORF;;chr14:22830254-22830419|27|46.37|0.79|5.87|+|2|MRPL52,None|1;;ENST00000557543.5_1_14:23299153-23299471:+|nuORF;;nc|ENSG00000172590|Q86TS9-4|MRPL52;;ENST00000553482.5_1_14:23299112-23299471:+|nuORF;;ENSG00000172590|ENST00000397496|MRPL52;;nc|ENSG00000172590|Q86TS9|MRPL52 7.053542137145996 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9337 54.273 595.0 267120.0 25 0 30245.0 + 9171 FGGVLILIHR 10 116 375.569541503551 1123.6867951108532 3 375.5693847537041 MULTI CID FTMS 0 0 0 9335 137223.109375 0.0084939468768956 15 -0.5821914672851562 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 54.773552608820026 0.052133998764723 1 N{I|L}{I|L}{I|L}HR 6 5 58.693 0.0 0.0 5.2233 0.0 0.0 359.2213697487718 0.0 359.2213697487718 0.0 47.56683695013966 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.9932645930102426 N{I|L}{I|L}{I|L}HR 5.2233 - 162 + 1 2.121 130011.3 1.0 5695 3640 9335 DOHH2_400M_050219_1,9337 DOHH2_400M_050219_1,9337,FGGVLILIHR True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9339 54.284 442.0 257270.0 25 0 29997.0 + 45395 YTAVVPLVY 9 97 512.7894182974595 1023.5642836617192 2 512.7896606326103 MULTI CID FTMS 0 0 0 9338 173485.0 0.0715884656677321 -4 0.049591064453125 1 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 89.42679046578446 0.015225546354407 1 [YT]AVVP{I|L}VY 9 0 + 69.139 0.0 0.0 6.7547 6.7547 86.971 0.0 0.0 0.0 15.969470785641498 11.0827208845118 11.0827208845118 6.562656267622117 0 1.1989700043360187 1.3979400086720375 1.860924374808178 0.0 + + [YT]AVVP{I|L}VY;[YT]VAVP{I|L}VY;[YT]AVP{I|L}VVY;[YT]VAP{I|L}VVY;[YT]AP{I|L}VVVY;[YV]TAVP{I|L}VY;[YT]AVPV{I|L}VY;[YT]APV{I|L}VVY;[TA]YVVP{I|L}VY;[YT]VAPV{I|L}VY 6.7547;6.1135;6.0401;5.3989;5.2102;5.1945;5.159;4.6912;4.5396;4.5178 +;-;-;-;-;-;-;-;-;- + 1106 1 2.121 92659.6 1.0 5696 3641 9338 DOHH2_400M_050219_1,9339 DOHH2_400M_050219_1,9339,YTAVVPLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9340 54.298 800.0 93396.0 25 0 21765.0 31710 RRPRRLSQTTL 11 79 461.94853169855 1382.8237656958502 3 461.9479553103447 MULTI CID FTMS 0 0 0 9338 107461.1640625 0.7193116816179986 -3 0.0456962585449218 2 Unmodified _RRPRRLSQTTL_ ENST00000309295.8_1_11:65343513-65343774:+|nuORF 1.1933415558491238 0.8695176722560516 1 P 1 10 3.0989 0.0 0.0 0.2241 0.0 0.0 1162.692095629247 120.05087457828358 1282.7429702075306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.2241 + + 5 + 1 2.121 71328.1 0.4000000059604645 5697 3641 9338 DOHH2_400M_050219_1,9340 DOHH2_400M_050219_1,9340,RRPRRLSQTTL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9341 54.311 800.0 84872.0 25 0 3220.2 -1 0 88 729.0202961632716 2184.0390590900147 3 729.0202514529228 MULTI CID FTMS 0 0 0 9338 76870.234375 0.9473834516127604 -3 0.0456962585449218 3 1 {[HG]|PP}YPPPPP 8 -1 21.068 0.0 0.0 0.96463 0.0 0.0 0.0 1338.586663858313 1338.586663858313 1.906592950506365 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}YPPPPP 0.96463 - 3141 1 2.121 58595.1 0.3600000143051147 5698 3641 9338 DOHH2_400M_050219_1,9341 DOHH2_400M_050219_1,9341, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9344 54.32 136.0 696110.0 25 0 75107.0 + 45634 YVMSYISIS 9 79 531.7626023036057 1061.5106516740111 2 531.7631103396416 MULTI CID FTMS 0 0 0 9343 414414.0 0.6313421299040812 -2 0.0416641235351562 1 Unmodified _YVMSYISIS_ REV__Tigger1_dup3614|chr4:153370819-153372334:-|1.1451237488797577|0.4461990466272801|1.36|48.0|48|3|sense 7.910154910731844 0.6385446671287552 1 YV 2 -1 20.969 0.0 0.0 1.9754 0.0 0.0 0.0 796.3575824996815 796.3575824996815 9.859856381998782 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YV 1.9754 + + 19 + 1 2.121 77490.0 1.0 5699 3643 9343 DOHH2_400M_050219_1,9344 DOHH2_400M_050219_1,9344,YVMSYISIS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9345 54.334 800.0 129720.0 25 0 10709.0 + 33033 SEPFHLIVSY 10 113 596.3061059127984 1190.5976588923968 2 596.3066284060478 MULTI CID FTMS 0 0 0 9343 95231.9453125 0.2927241988373726 -3 0.0569648742675781 2 Unmodified _SEPFHLIVSY_ chr1:161710912-161711226|11|13.18|0.0|11.73|+|2|FCRLA,None|1;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-13|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-6|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 103.74828524460852 0.0066474208684803 1 [HM]V{I|L}DT{I|L}{I|L}SY 10 7 + 78.977 0.0 0.0 6.6334 6.6334 85.493 0.0 0.0 0.0 63.76078152608656 6.500065532235126 6.500065532235126 5.255762612236907 0 0.6549471895720984 0.0 1.4291746928241125 0.0 [HM]V{I|L}DT{I|L}{I|L}SY;[HM]VES{I|L}{I|L}{I|L}SY;[HM]ESV{I|L}{I|L}{I|L}SY;[HM]EVS{I|L}{I|L}{I|L}SY;[HM]VEVT{I|L}{I|L}SY;[H{I|L}]M{I|L}TD{I|L}VSY;[H{I|L}]{I|L}MTD{I|L}VSY;[HM]EVVT{I|L}{I|L}SY;[H{I|L}]M{I|L}{I|L}SEVSY;[H{I|L}]M{I|L}{I|L}VSESY 6.6334;6.192;6.1465;5.7458;5.6863;5.6268;5.374;5.2401;5.1854;5.1399 -;-;-;-;-;-;-;-;-;- 987 + 1 2.121 82798.2 0.5299999713897705 5700 3643 9343 DOHH2_400M_050219_1,9345 DOHH2_400M_050219_1,9345,SEPFHLIVSY True True SEPFHLIVSY 54.334197 596.306628406048 2335852.5 9343.0 ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-3|FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;nc|ENSG00000132185|Q7L513-6|FCRLA;;chr1:161710912-161711226|11|13.18|0.0|11.73|+|2|FCRLA,None|1;;nc|ENSG00000132185|Q7L513-13|FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-8|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA 6.969572067260742 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9346 54.343 496.0 301030.0 25 0 22634.0 -1 IPRCDFAGI 9 141 524.7680691652306 1047.521585397261 2 524.7674438357353 MULTI CID FTMS 0 0 0 9343 118294.375 0.2722741387759294 -2 0.0416641235351562 3 Carbamidomethyl (C) _IPRC(Carbamidomethyl (C))DFAGI_ ENST00000435523.5_1_7:130737210-130773109:-|nuORF 12.531546534597751 0.4974689918368763 1 [YG]{M(Oxidation (M))|F}R[TA]VV 8 -1 24.971 0.0 0.0 2.3838 0.0 0.0 0.0 151.01942410259235 151.01942410259235 5.3499431889874 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.3054621874040891 0.3807196863200844 [YG]{M(Oxidation (M))|F}R[TA]VV 2.3838 - 1287 1 2.121 122641.8 1.0 5701 3643 9343 DOHH2_400M_050219_1,9346 DOHH2_400M_050219_1,9346,IPRCDFAGI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9348 54.36 800.0 89726.0 25 0 6595.3 + -1 QEDDFGVAW 9 97 1066.4494361317957 0 1066.447070300579 PEAK CID FTMS 0 0 0 9347 39563.7890625 0.4554988359253826 1 -0.0994987487792968 1 ENSG00000132467|ENST00000254803|UTP3 1 WAR{M(Oxidation (M))|F}DD 6 -1 50.157 0.0 0.0 2.3538 0.0 0.0 1083.4557833761817 254.0789583795532 1337.5347417557348 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7544321917401078 0.7742275032520141 WAR{M(Oxidation (M))|F}DD 2.3538 - 1941 + 1 2.121 53202.7 0.4900000095367431 5702 3644 9347 DOHH2_400M_050219_1,9348 DOHH2_400M_050219_1,9348, False False QEDDFGVAW 54.36024 1066.44707030058 637810.0625 9347.0 ENSG00000132467|ENST00000254803|UTP3 10.292536735534668 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9349 54.372 668.0 293240.0 25 0 23205.0 + 24338 MEKSFSDLF 9 165 552.2577239402189 1102.5008949472376 2 552.2581054568291 MULTI CID FTMS 0 0 0 9347 148447.15625 0.498231289092224 -2 0.0312538146972656 2 Unmodified _MEKSFSDLF_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000404054.3_1_4:1742398-1742845:+|nuORF;ENST00000470808.1_1_4:1741140-1742845:+|nuORF 103.41943736471065 0.0091853052135676 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KS{M(Oxidation (M))|F}SD{I|L}{M(Oxidation (M))|F} 9 0 + 66.899 0.0 0.0 6.068 6.068 84.64 0.0 0.0 0.0 6.266485927408766 16.478174818886373 6.266485927408766 6.266485927408766 0 1.174742501084005 0.0 1.9110892374447828 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KS{M(Oxidation (M))|F}SD{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}SCK{M(Oxidation (M))|F}M{I|L}{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}HSD{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSKEM{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KSAYD{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}SCKYD{I|L}{M(Oxidation (M))|F};[MT][VG]S{M(Oxidation (M))|F}SD{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG]S{M(Oxidation (M))|F}SD{I|L}{M(Oxidation (M))|F};[YE]GSKEM{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG]SA{M(Oxidation (M))|F}M{I|L}{M(Oxidation (M))|F} 6.068;5.4996;5.3869;5.317;5.2448;5.2113;5.1877;5.0854;4.8742;4.5505 +;-;-;-;-;-;-;-;-;- + 3226 1 2.121 147665.7 1.0 5703 3644 9347 DOHH2_400M_050219_1,9349 DOHH2_400M_050219_1,9349,MEKSFSDLF True True MEKSFSDLF 54.37188 552.258105456829 2098395.25 9347.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENST00000404054.3_1_4:1742398-1742845:+|nuORF;;ENST00000470808.1_1_4:1741140-1742845:+|nuORF 5.691856861114502 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9350 54.386 800.0 165210.0 25 0 15601.0 + 36937 TEVQLTEL 8 134 466.75039696144944 931.4862409896988 2 466.7505065798759 MULTI CID FTMS 0 0 0 9347 121532.0390625 1.0 0 0.0 3 Unmodified _TEVQLTEL_ CON__P35900;ENSG00000171431|ENST00000167588|KRT20 50.855029805455786 0.1352255786796883 1 {[QN]|[E{I|L}]|[KN]}TN{I|L} 5 4 34.96 0.0 0.0 3.7532 0.0 0.0 0.0 358.1624854567489 358.1624854567489 13.969907629550882 0.0 0.0 0.0 0 0.3807196863200844 0.958607314841775 1.1109243748081783 0.0 {[QN]|[E{I|L}]|[KN]}TN{I|L} 3.7532 - 1220 1 2.121 104785.2 0.8299999833106995 5704 3644 9347 DOHH2_400M_050219_1,9350 DOHH2_400M_050219_1,9350,TEVQLTEL False True False False contaminant PXD020620_cell_line DOHH2_400M_050219_1 9351 54.4 800.0 160170.0 25 0 2768.7 -1 0 109 1180.4891879675777 7076.891469005866 6 1181.249560534954 MULTI CID FTMS 0 0 0 9347 100964.8359375 0.7763064652844984 8 -0.4429092407226562 4 1 E 1 -1 5.4846 0.0 0.0 0.077499 0.0 0.0 6554.70288365606 390.11521326236567 6944.818096918426 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.077499 - 10 + 1 2.121 74643.4 0.5400000214576721 5705 3644 9347 DOHH2_400M_050219_1,9351 DOHH2_400M_050219_1,9351, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9352 54.409 539.0 136310.0 25 0 7959.3 + 7160 EENSAIIIQSW 11 98 645.3219654725347 1288.6293780118692 2 645.3221313357353 MULTI CID FTMS 0 0 0 9347 138315.59375 1.0 0 0.0 5 Unmodified _EENSAIIIQSW_ ENSG00000066279|ENST00000367409|ASPM 80.6760300276096 0.0071538679453211 1 {[WS]|[C(Carbamidomethyl (C)){I|L}]}Q{I|L}E{I|L} 6 8 36.763 0.0 0.0 2.8529 0.0 0.0 0.0 529.2390331234504 529.2390331234504 17.46584697476848 0.0 0.0 0.0 0 0.6109243748081782 0.9208187539523752 1.0044321917401078 0.75 {[WS]|[C(Carbamidomethyl (C)){I|L}]}Q{I|L}E{I|L} 2.8529 - 562 1 2.121 59848.9 1.0 5706 3644 9347 DOHH2_400M_050219_1,9352 DOHH2_400M_050219_1,9352,EENSAIIIQSW True True EENSAIIIQSW 54.409065 645.322131335735 643509.625 9347.0 ENSG00000066279|ENST00000367409|ASPM 5.889417330423991 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9353 54.416 367.0 67533.0 25 0 11051.0 -1 0 49 1019.4614534070732 0 1019.459277331829 PEAK CID FTMS 0 0 0 9347 93385.3671875 0.6701208180262221 -1 0.0274429321289062 6 1 {M(Oxidation (M))|F}TVV 4 -1 16.887 0.0 0.0 0.82904 0.0 0.0 1380.56742478114 207.0784853570922 1587.6459101382322 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {M(Oxidation (M))|F}TVV 0.82904 - 44 + 1 2.121 25727.5 1.0 5707 3644 9347 DOHH2_400M_050219_1,9353 DOHH2_400M_050219_1,9353, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9354 54.429 665.0 206550.0 25 0 19074.0 + 45517 YTSQHLAEE 9 115 539.2465856185877 1076.4786183039753 2 539.7491332888603 MULTI CID FTMS 0 0 0 9347 95606.7890625 0.7184471189127308 -2 0.0312538146972656 7 Unmodified _YTSQHLAEE_ REV__ENSG00000013293|ENST00000231706|SLC7A14 11.640296217721598 0.521594087909532 1 [YT][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]VVV[CS] 9 -1 + 25.708 0.0 0.0 2.3881 2.3881 72.006 0.0 0.0 0.0 6.4381643755996265 4.655593552960937 4.655593552960937 4.655593552960937 0 0.0 1.6989700043360187 1.086696871556164 0.0 [YT][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]VVV[CS];[YT][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]VVTST;[YV][WR]TY[CS];[YT]EE[KG]YST;[YV][MT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[CS];[YT]EE[YK]GST;[YV][WR]CYST;[HS]{M(Oxidation (M))|F}T[WR]M{I|L};[YT]EE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[YV][MT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TST 2.3881;1.9556;1.79;1.3223;1.2306;1.1587;0.93402;0.83136;0.79934;0.79808 -;-;-;-;-;-;-;-;-;- 770 1 2.121 106592.0 1.0 5708 3644 9347 DOHH2_400M_050219_1,9354 DOHH2_400M_050219_1,9354,YTSQHLAEE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9355 54.443 800.0 32683.0 25 0 2592.2 -1 0 56 1130.499804675579 0 1130.499804675579 PEAK CID FTMS 0 0 0 -1 0 8 1 R 1 -1 1.9897 0.0 0.0 0.088079 0.0 0.0 1176.3971180408082 923.4661348932248 2099.863252934033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.088079 - 2 + 1 2.121 24965.1 0.4099999964237213 5709 3644 9347 DOHH2_400M_050219_1,9355 DOHH2_400M_050219_1,9355, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9357 54.46 800.0 42955.0 25 0 3163.8 + 7209 EEQPQGWVSW 10 76 623.2803527221785 1244.5461525111568 2 623.7814819216728 MULTI CID FTMS 0 0 0 9356 28903.435546875 0.2337994241654601 8 -0.3474769592285156 1 Unmodified _EEQPQGWVSW_ ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-4|VPS13B;nc|ENSG00000132549|Q7Z7G8-5|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B 9.38312468134398 0.6832340498775793 1 SW 2 8 20.969 0.0 0.0 1.6849 0.0 0.0 953.4233782496784 0.0 953.4233782496784 0.0 8.172914993126053 0.0 0.0 0 0.0 0.0 0.0 0.0 + SW 1.6849 + + 79 + 1 2.103 30145.5 0.3799999952316284 5710 3645 9356 DOHH2_400M_050219_1,9357 DOHH2_400M_050219_1,9357,EEQPQGWVSW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9358 54.474 800.0 142790.0 25 0 23465.0 + -1 IRDNFVIIY 9 91 576.8237028163709 1151.6328526995417 2 576.8242065310478 MULTI CID FTMS 0 0 0 9356 103055.3046875 1.0 0 0.0 2 Oxidation (M) _ILM(Oxidation (M))NTRLLY_ nc|ENSG00000072958|Q9BXS5-2|AP1M1;ENSG00000072958|ENST00000291439|AP1M1 32.30548876998284 0.1201446275138228 1 {M(Oxidation (M))|F}V{I|L}{I|L}Y 5 -1 46.454 0.0 0.0 4.0337 0.0 0.0 498.2563648908219 0.0 498.2563648908219 0.0 29.852138025497226 0.0 0.0 0 1.0 0.0 0.0 0.0 {M(Oxidation (M))|F}V{I|L}{I|L}Y 4.0337 - 111 1 2.103 88977.6 0.9800000190734864 5711 3645 9356 DOHH2_400M_050219_1,9358 DOHH2_400M_050219_1,9358,ILMNTRLLY False False IRDNFVIIY 54.473644 576.824206531048 715340.875 9356.0 nc|ENSG00000072958|Q9BXS5-2|AP1M1;;ENSG00000072958|ENST00000291439|AP1M1 5.959463596343994 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9359 54.478 250.0 847580.0 25 0 570500.0 43037 VYAYGVVLY 9 34 1046.5533349578416 1045.5460584912416 1 1048.559252917767 MULTI CID FTMS 0 0 0 9356 673252.1875 1.0 0 0.0 3 Unmodified _VYAYGVVLY_ ENSG00000078061|ENST00000377045|ARAF;ENST00000469505.1_1_X:47428924-47429504:+|nuORF 2.302733041254933 0.8342969208511092 1 A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3 7 10.458 0.0 0.0 1.0002 0.0 0.0 712.3751087873062 0.0 712.3751087873062 0.0 10.45757490560675 0.0 0.0 0 0.0 0.0 0.0 0.0 A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.0002 - 3 1 2.103 141114.9 1.0 5712 3645 9356 DOHH2_400M_050219_1,9359 DOHH2_400M_050219_1,9359,VYAYGVVLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9360 54.483 275.0 500190.0 25 0 134970.0 -1 0 63 1043.5441145390437 2085.0736761448875 2 1043.543872058392 MULTI CID FTMS 0 0 0 9356 321127.5625 1.0 0 0.0 4 1 [{I|L}P]VY[TA]VV 8 -1 43.461 0.0 0.0 2.0844 0.0 0.0 0.0 1239.5605692861766 1239.5605692861766 35.501896823007826 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.805462187404089 0.0 [{I|L}P]VY[TA]VV 2.0844 - 273 1 2.103 94512.9 1.0 5713 3645 9356 DOHH2_400M_050219_1,9360 DOHH2_400M_050219_1,9360, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9361 54.497 800.0 218530.0 25 0 18237.0 -1 0 114 1092.5258259840675 2183.037099034935 2 1093.030566394329 MULTI CID FTMS 0 0 0 9356 296006.0625 1.0 0 0.0 5 1 PPPPPP{[QN]|[E{I|L}]|[KN]} 8 -1 64.639 0.0 0.0 2.961 0.0 0.0 1340.6063567291628 0.0 1340.6063567291628 0.0 24.21401510694509 0.0 0.0 0 1.0 0.0 0.5010912013506126 2.190614065464281 PPPPPP{[QN]|[E{I|L}]|[KN]} 2.961 - 7005 + 1 2.103 112145.1 0.8100000023841858 5714 3645 9356 DOHH2_400M_050219_1,9361 DOHH2_400M_050219_1,9361, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9362 54.506 468.0 97174.0 25 0 19638.0 -1 0 82 1109.50327352452 2216.99199411584 2 1110.002612292767 MULTI CID FTMS 0 0 0 9356 188586.515625 1.0 0 0.0 6 1 [QT]M[YG]AQQNA{M(Oxidation (M))|F}[YE]V{I|L} 15 -1 51.577 0.0 0.0 2.3264 0.0 0.0 0.0 470.150416317265 470.150416317265 44.5872875024979 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3252574989159953 [QT]M[YG]AQQNA{M(Oxidation (M))|F}[YE]V{I|L} 2.3264 - 384 1 2.103 36261.9 1.0 5715 3645 9356 DOHH2_400M_050219_1,9362 DOHH2_400M_050219_1,9362, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9363 54.52 800.0 34839.0 25 0 1177.9 -1 0 64 1169.537678563753 0 1169.879565417767 PEAK CID FTMS 0 0 0 9356 132632.328125 1.0 0 0.0 7 1 V 1 -1 6.9897 0.0 0.0 0.29908 0.0 0.0 1436.6606709929372 798.3126031343367 2234.9732741272737 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.29908 - 23 + 1 2.103 21695.6 0.5600000023841858 5716 3645 9356 DOHH2_400M_050219_1,9363 DOHH2_400M_050219_1,9363, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9364 54.535 800.0 30434.0 25 0 896.98 -1 0 63 947.3096801638604 0 947.3096801638604 PEAK CID FTMS 0 0 0 -1 0 8 1 G 1 -1 5.4846 0.0 0.0 0.28979 0.0 0.0 824.5571522204956 1008.0070284479124 1832.564180668408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.28979 - 3 + 1 2.103 24215.0 0.5799999833106995 5717 3645 9356 DOHH2_400M_050219_1,9364 DOHH2_400M_050219_1,9364, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9365 54.544 490.0 46071.0 25 0 2662.6 -1 0 47 974.9739868044852 0 974.9739868044852 PEAK CID FTMS 0 0 0 -1 0 9 1 WD 2 -1 7.9588 0.0 0.0 0.40858 0.0 0.0 569.2627186267456 1074.5423067682252 1643.805025394971 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WD 0.40858 - 15 + 1 2.103 26742.1 1.0 5718 3645 9356 DOHH2_400M_050219_1,9365 DOHH2_400M_050219_1,9365, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9367 54.548 30.0 1905000.0 25 0 233310.0 + 45396 YTAVVPLVY 9 75 512.7894182974595 1023.5642836617192 2 512.7894775271416 MULTI CID FTMS 0 0 0 9366 2172111.25 0.8963202100880171 1 -0.1113777160644531 1 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 89.42679046578446 0.015225546354407 1 [YT]AVVP{I|L}VY 9 0 + 67.927 0.0 0.0 6.6363 6.6363 85.941 0.0 0.0 0.0 15.253312076568903 44.77429875347696 15.253312076568903 5.822646798160562 0 1.1989700043360187 1.3010299956639813 1.836696871556164 0.0 + + [YT]AVVP{I|L}VY;[YT]AVP{I|L}VVY;[YT]AVPV{I|L}VY;[YV][TA]VP{I|L}VY;[YT]A[{I|L}P]VVVY;[{I|L}P]VY[TA]VVY;{[VA]|[{I|L}G]}TYVP{I|L}VY;[YV][TA]P{I|L}VVY;[YT]{I|L}{I|L}[PG]VVY;[YT][{I|L}P]AVVVY 6.6363;6.0675;5.1864;4.5535;4.4132;4.0562;4.0426;3.9846;3.7521;3.6817 +;-;-;-;-;-;-;-;-;- + 627 1 2.103 51319.2 1.0 5719 3646 9366 DOHH2_400M_050219_1,9367 DOHH2_400M_050219_1,9367,YTAVVPLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9368 54.562 800.0 74946.0 25 0 7461.9 + 14282 IEISELPVRTW 11 66 671.8722183596044 1341.7298837860087 2 671.8720580935478 MULTI CID FTMS 0 0 0 9366 28776.1640625 0.2628027314053826 1 -0.1113777160644531 2 Unmodified _IEISELPVRTW_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 41.34703777101937 0.1916454788238683 1 {I|L}E{I|L}S[QT]V{I|L}EE 10 6 88.198 0.0 0.0 6.5734 0.0 0.0 0.0 197.09417139224848 197.09417139224848 74.70290649673359 0.0 0.0 0.0 0 2.1549471895720984 1.6989700043360187 1.1549471895720984 0.0 {I|L}E{I|L}S[QT]V{I|L}EE 6.5734 - 497 + 1 2.103 50552.5 0.4799999892711639 5720 3646 9366 DOHH2_400M_050219_1,9368 DOHH2_400M_050219_1,9368,IEISELPVRTW False True IEISELPVRTW 54.56168 671.872058093548 596888.4375 9366.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 6.60839859644572 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9369 54.576 800.0 140980.0 25 0 12578.0 + 9586 FLKEIVETF 9 149 563.3131104835377 1124.6116680338753 2 563.8149902224541 MULTI CID FTMS 0 0 0 9366 152814.3125 1.0 0 0.0 3 Unmodified _FLKEIVETF_ ENSG00000153201|ENST00000283195|RANBP2 47.74868867922204 0.0453060283459952 1 [{I|L}V]EK{M(Oxidation (M))|F}{I|L}ET{M(Oxidation (M))|F} 9 4 + 50.556 0.0 0.0 4.4955 4.4955 73.242 0.0 0.0 0.0 1.2775795865843378 10.330145895351848 1.2775795865843378 1.2775795865843378 0 0.8182503180159344 1.3979400086720375 1.048455006504028 0.3807196863200844 [{I|L}V]EK{M(Oxidation (M))|F}{I|L}ET{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}V{I|L}ET{M(Oxidation (M))|F};[{I|L}V]{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}VET{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}{I|L}VET{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{M(Oxidation (M))|F}{I|L}ET{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}KV{M(Oxidation (M))|F}{I|L}ET{M(Oxidation (M))|F};[{I|L}V]{[SA]|[TG]}{M(Oxidation (M))|F}V{I|L}ET{M(Oxidation (M))|F};[K{I|L}]E{M(Oxidation (M))|F}V{I|L}ET{M(Oxidation (M))|F};[{I|L}V]{[SA]|[TG]}V{M(Oxidation (M))|F}{I|L}ET{M(Oxidation (M))|F};[K{I|L}]E{M(Oxidation (M))|F}{I|L}VET{M(Oxidation (M))|F} 4.4955;4.3819;4.3005;4.2679;4.1574;4.0926;4.0759;3.8602;3.7867;3.7463 -;-;-;-;-;-;-;-;-;- 2032 1 2.103 87308.3 0.5899999737739563 5721 3646 9366 DOHH2_400M_050219_1,9369 DOHH2_400M_050219_1,9369,FLKEIVETF True True FLKEIVETF 54.575516 563.314 963467.4375 9366.0 ENSG00000153201|ENST00000283195|RANBP2 5.716624975204468 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9370 54.589 800.0 68531.0 25 0 2751.4 -1 0 100 1165.203354500995 0 1165.206469714642 PEAK CID FTMS 0 0 0 9366 166686.9375 1.0 0 0.0 4 1 QY{M(Oxidation (M))|F}DVVQE 8 -1 12.159 0.0 0.0 0.52222 0.0 0.0 797.747332926015 519.1870211236936 1316.9343540497086 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QY{M(Oxidation (M))|F}DVVQE 0.52222 - 303 + 1 2.103 40094.9 0.6399999856948853 5722 3646 9366 DOHH2_400M_050219_1,9370 DOHH2_400M_050219_1,9370, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9371 54.603 800.0 39047.0 25 0 3187.3 -1 0 57 1186.2933128551886 0 1186.295092761517 PEAK CID FTMS 0 0 0 9366 178155.59375 1.0 0 0.0 5 1 K 1 -1 4.6041 0.0 0.0 0.19422 0.0 0.0 1353.0847973866123 886.3700655572874 2239.4548629439 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.19422 - 6 + 1 2.103 27919.2 0.6299999952316284 5723 3646 9366 DOHH2_400M_050219_1,9371 DOHH2_400M_050219_1,9371, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9372 54.617 800.0 16907.0 25 0 1297.0 -1 0 37 1189.996997058392 0 1189.996997058392 PEAK CID FTMS 0 0 0 -1 0 6 1 V 1 -1 5.4846 0.0 0.0 0.23064 0.0 0.0 1844.6925281970591 431.1910799615844 2275.883608158644 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.23064 - 1 + 1 2.103 18382.6 0.6000000238418579 5724 3646 9366 DOHH2_400M_050219_1,9372 DOHH2_400M_050219_1,9372, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9373 54.632 800.0 33761.0 25 0 3508.0 -1 0 55 1040.030932605267 0 1040.030932605267 PEAK CID FTMS 0 0 0 -1 0 7 1 T 1 -1 2.2185 0.0 0.0 0.10676 0.0 0.0 874.3777088611217 1099.5947970026002 1973.9725058637216 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.10676 - 2 + 1 2.103 27086.7 0.5699999928474426 5725 3646 9366 DOHH2_400M_050219_1,9373 DOHH2_400M_050219_1,9373, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9374 54.646 800.0 79068.0 25 0 3852.9 + -1 YTGTPDWLY 9 90 1115.313525378704 0 1115.313525378704 PEAK CID FTMS 0 0 0 -1 0 8 ENST00000471817.2_1_20:60866739-60868940:+|nuORF;ENSG00000130703|ENST00000313733|OSBPL2;nc|ENSG00000130703|Q9H1P3-2|OSBPL2 1 {I|L}W{[MS]|[{M(Oxidation (M))|F}A]}W 5 -1 16.853 0.0 0.0 0.75622 0.0 0.0 1313.2021717517457 209.0572908990844 1522.25946265083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6139829889124311 0.0 {I|L}W{[MS]|[{M(Oxidation (M))|F}A]}W 0.75622 - 266 + 1 2.103 46337.6 0.5799999833106995 5726 3646 9366 DOHH2_400M_050219_1,9374 DOHH2_400M_050219_1,9374, False False YTGTPDWLY 54.646305 1115.3135253787 2364540.25 9366.0 ENST00000471817.2_1_20:60866739-60868940:+|nuORF;;ENSG00000130703|ENST00000313733|OSBPL2;;nc|ENSG00000130703|Q9H1P3-2|OSBPL2 5.907253265380859 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9375 54.655 398.0 14525.0 25 0 1340.9 -1 0 19 977.944873034954 0 977.944873034954 PEAK CID FTMS 0 0 0 -1 0 9 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 13717.1 1.0 5727 3646 9366 DOHH2_400M_050219_1,9375 DOHH2_400M_050219_1,9375, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9377 54.664 298.0 214130.0 25 0 16907.0 + 28227 PQPPRHPGY 9 93 524.7680691652306 1047.521585397261 2 524.7680541872978 MULTI CID FTMS 0 0 0 9376 139863.53125 0.3219191319727083 2 -0.0652313232421875 1 Unmodified _PQPPRHPGY_ REV__ENSG00000105419|ENST00000558555|MEIS3;REV__ENST00000495167.3_1_17:15689952-15690237:+|nuORF;REV__ENST00000561040.1_1_19:47919907-47920643:-|nuORF;REV__ENST00000561204.5_1_19:47909736-47921444:-|nuORF;REV__nc|ENSG00000105419|Q99687-2|MEIS3;REV__nc|ENSG00000105419|Q99687-3|MEIS3;REV__nc|ENSG00000188013|A8K0S8|MEIS3P2 7.910154910731844 0.6385446671287552 1 [YT]AV 4 -1 20.635 0.0 0.0 1.9699 0.0 0.0 0.0 610.2825411432249 610.2825411432249 5.150312510170778 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [YT]AV 1.9699 - 61 + 1 2.103 56589.3 1.0 5728 3647 9376 DOHH2_400M_050219_1,9377 DOHH2_400M_050219_1,9377,PQPPRHPGY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9378 54.667 145.0 528760.0 25 0 43437.0 43965 YHSGSLSSKP 10 86 531.7626023036057 1061.5106516740111 2 531.7631103396416 MULTI CID FTMS 0 0 0 9376 322444.0625 0.4912298358493552 2 -0.0652313232421875 2 Unmodified _YHSGSLSSKP_ ENST00000556154.5_1_14:92406940-92413135:-|nuORF 5.296884461304476 0.7021353017287152 1 YV 2 9 19.464 0.0 0.0 1.8336 0.0 0.0 0.0 796.3572265159245 796.3572265159245 8.20489028679166 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YV 1.8336 - 26 + 1 2.103 60332.9 1.0 5729 3647 9376 DOHH2_400M_050219_1,9378 DOHH2_400M_050219_1,9378,YHSGSLSSKP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9379 54.68 794.0 161750.0 25 0 17751.0 -1 MAALLLRH 8 110 470.771904145139 939.529255357078 2 470.7719909548759 MULTI CID FTMS 0 0 0 9376 115342.5390625 0.7208409593515449 -2 0.21234130859375 3 Oxidation (M) _M(Oxidation (M))AALLLRH_ ENSG00000143252|ENST00000367975|SDHC;nc|ENSG00000143252|Q99643-2|SDHC;nc|ENSG00000143252|Q99643-3|SDHC;nc|ENSG00000143252|Q99643-4|SDHC 49.66892048692302 0.1408045912742846 1 {I|L}{I|L}{I|L}HR 5 -1 58.779 0.0 0.0 6.2562 0.0 0.0 289.10585974074587 0.0 289.10585974074587 0.0 46.03238435722715 0.0 0.0 0 1.2302046884880935 0.0 0.0 1.1527971466316191 {I|L}{I|L}{I|L}HR 6.2562 - 89 + 1 2.103 103599.2 1.0 5730 3647 9376 DOHH2_400M_050219_1,9379 DOHH2_400M_050219_1,9379,MAALLLRH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9381 54.694 630.0 176330.0 25 0 22723.0 + 6469 EAFVRAFL 8 105 476.7661518848485 951.517750836497 2 476.7655212283134 MULTI CID FTMS 0 0 0 9380 132742.625 1.0 0 0.0 1 Unmodified _EAFVRAFL_ ENSG00000105171|ENST00000585603|POP4;ENST00000586136.5_1_19:30097284-30104129:+|nuORF;ENST00000588551.5_1_19:30097225-30101540:+|nuORF 46.92087301778293 0.1537303740847981 1 EA{M(Oxidation (M))|F}V{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L} 8 0 + 61.475 0.0 0.0 6.4607 6.4607 91.155 0.0 0.0 0.0 46.781993496232495 11.297443431192214 11.297443431192214 11.427418157023872 0 0.3494850021680094 1.6989700043360187 0.0 0.2396518287104437 + + EA{M(Oxidation (M))|F}V{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L};EA{M(Oxidation (M))|F}{I|L}{[NV]|[RG]}{M(Oxidation (M))|F}{I|L} 6.4607;5.2597 +;- + 238 + 1 2.103 87241.1 1.0 5731 3648 9380 DOHH2_400M_050219_1,9381 DOHH2_400M_050219_1,9381,EAFVRAFL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9382 54.706 691.0 212860.0 25 0 18345.0 + 42968 VVSVLPYS 8 106 432.24698012285154 862.4794073125031 2 432.2469970583916 MULTI CID FTMS 0 0 0 9380 90838.0703125 1.0 0 0.0 2 Unmodified _VVSVLPYS_ REV__ENSG00000134250|ENST00000256646|NOTCH2;REV__ENST00000493703.1_1_1:120465142-120466525:-|nuORF 9.347437153973935 0.7675937258251505 1 T 1 -1 19.292 0.0 0.0 2.2368 0.0 0.0 167.06001754564153 591.3492861701718 758.4093037158134 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.5 0.0 T 2.2368 - 13 + 1 2.103 117828.6 1.0 5732 3648 9380 DOHH2_400M_050219_1,9382 DOHH2_400M_050219_1,9382,VVSVLPYS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9383 54.72 800.0 114430.0 25 0 4730.7 + -1 STIGQAFEL 9 109 964.9936727242196 1927.9727925152392 2 965.4982787966728 MULTI CID FTMS 0 0 0 9380 86939.203125 0.4820822947915338 -3 0.2382049560546875 3 ENSG00000185634|ENST00000332408|SHC4;nc|ENSG00000160691|P29353-5|SHC1;nc|ENSG00000160691|P29353|SHC1;nc|ENSG00000160691|P29353-2|SHC1;nc|ENSG00000160691|P29353-7|SHC1;nc|ENSG00000160691|P29353-3|SHC1;ENSG00000160691|ENST00000448116|SHC1;nc|ENSG00000185634|Q6S5L8-2|SHC4 1 {[QV]|[N{I|L}]|[RA]|[KV]}A{[MG]|[TS]}AE{M(Oxidation (M))|F}{I|L} 9 -1 49.504 0.0 0.0 2.5677 0.0 0.0 0.0 978.4713026072892 978.4713026072892 7.397993616023712 0.0 0.0 0.0 0 0.0 2.0 1.6861818737241734 0.3054621874040891 {[QV]|[N{I|L}]|[RA]|[KV]}A{[MG]|[TS]}AE{M(Oxidation (M))|F}{I|L} 2.5677 - 7385 1 2.103 68119.8 0.4300000071525574 5733 3648 9380 DOHH2_400M_050219_1,9383 DOHH2_400M_050219_1,9383, False False STIGQAFEL 54.719586 965.498278796673 895609.5 9380.0 ENSG00000185634|ENST00000332408|SHC4;;nc|ENSG00000160691|P29353-5|SHC1;;nc|ENSG00000160691|P29353|SHC1;;nc|ENSG00000160691|P29353-2|SHC1;;nc|ENSG00000160691|P29353-7|SHC1;;nc|ENSG00000160691|P29353-3|SHC1;;ENSG00000160691|ENST00000448116|SHC1;;nc|ENSG00000185634|Q6S5L8-2|SHC4 6.0293294588724775 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9385 54.737 800.0 62307.0 25 0 14022.0 -1 LRRRPRVYYRI 11 88 795.4770473173086 1588.939541701417 2 795.9802123904228 MULTI CID FTMS 0 0 0 9384 44384.37890625 0.5388295964355229 3 -0.0658378601074218 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LRRRPRVYYRI_ ENST00000254190.3_1_15:101718013-101718115:-|nuORF 0.0 0.8751479354844584 1 Y 1 -1 11.109 0.0 0.0 0.69916 0.0 0.0 1407.8646495889154 0.0 1407.8646495889154 0.0 0.2717883116129638 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.69916 + + 106 + 1 2.103 41190.8 0.4000000059604645 5734 3649 9384 DOHH2_400M_050219_1,9385 DOHH2_400M_050219_1,9385,LRRRPRVYYRI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9386 54.746 520.0 142830.0 25 0 11156.0 + 35191 SSDGAISLLTY 11 116 563.7848392487559 1125.5551255643118 2 563.7852661013603 MULTI CID FTMS 0 0 0 9384 86633.2734375 0.2668226849615887 -9 0.4614791870117187 2 Unmodified _SSDGAISLLTY_ ENSG00000157020|ENST00000350697|SEC13;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;ENST00000482647.5_1_3:10353516-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 62.57269311338072 0.058704053366003 1 {I|L}S{I|L}SMY 6 7 39.052 0.0 0.0 3.4696 0.0 0.0 413.2139523238805 0.0 413.2139523238805 0.0 16.632515884361545 0.0 0.0 0 0.0 0.0 0.9947026752325154 0.0 {I|L}S{I|L}SMY 3.4696 - 716 + 1 2.103 59996.7 1.0 5735 3649 9384 DOHH2_400M_050219_1,9386 DOHH2_400M_050219_1,9386,SSDGAISLLTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9387 54.759 720.0 124570.0 25 0 6246.3 -1 0 110 957.9886204668728 1913.9626880005453 2 958.490771472454 MULTI CID FTMS 0 0 0 9384 101706.5546875 0.8504797522677443 -5 0.3770713806152344 3 1 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[PG]{[RE]|[WV]}NYQS{I|L} 17 -1 + 93.249 0.0 0.0 4.872 4.872 77.368 0.0 0.0 0.0 34.75959411269238 10.663254583993565 10.663254583993565 3.107346925073955 0 1.2302046884880935 2.0 0.9489700043360187 1.5044321917401078 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[PG]{[RE]|[WV]}NYQS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NA{M(Oxidation (M))|F}[DP]{[HG]|PP}DYQS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW[PG]{[RE]|[WV]}NYQS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQRKK{[QC]|[C(Carbamidomethyl (C))A]}C(Carbamidomethyl (C)){I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}NYQS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NA[PG]D{[RE]|[WV]}NYQS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQRKK{[QC]|[C(Carbamidomethyl (C))A]}C(Carbamidomethyl (C)){I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}N[KP]D{[RE]|[WV]}NYQS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}N[QP]D{[RE]|[WV]}NYQS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}GGYQS{I|L} 4.872;4.7097;4.5206;4.4966;4.3689;4.3459;4.1461;3.9944;3.9944;3.8979 -;-;-;-;-;-;-;-;-;- 3022 + 1 2.103 64643.4 1.0 5736 3649 9384 DOHH2_400M_050219_1,9387 DOHH2_400M_050219_1,9387, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9388 54.773 800.0 25284.0 25 0 1167.2 -1 0 47 1100.224780261517 0 1100.224780261517 PEAK CID FTMS 0 0 0 -1 0 4 1 PP 2 -1 10.969 0.0 0.0 0.49895 0.0 0.0 1550.1115345447154 451.1944674127563 2001.306001957472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.49895 - 14 + 1 2.103 20572.2 0.4799999892711639 5737 3649 9384 DOHH2_400M_050219_1,9388 DOHH2_400M_050219_1,9388, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9390 54.781 324.0 168790.0 25 0 17734.0 -1 0 59 1092.5258259840675 2183.037099034935 2 1093.024340808392 MULTI CID FTMS 0 0 0 9389 133793.015625 0.4519941736835204 5 -0.0674209594726562 1 1 [QP][QT]PPPP 8 -1 38.945 0.0 0.0 1.784 0.0 0.0 0.0 1337.5851924775118 1337.5851924775118 15.580371765640422 0.0 0.0 0.0 0 0.5 0.0 0.0 1.1549471895720984 [QP][QT]PPPP 1.784 - 497 1 2.103 43013.6 1.0 5738 3650 9389 DOHH2_400M_050219_1,9390 DOHH2_400M_050219_1,9390, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9394 54.803 611.0 70987.0 25 0 3483.3 -1 0 76 1086.8612187963988 3257.5618269893966 3 1087.532275378704 MULTI CID FTMS 0 0 0 9393 54446.39453125 0.2064439598583044 -18 0.629730224609375 1 1 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[H{I|L}]NTV 9 -1 20.608 0.0 0.0 0.63262 0.0 0.0 0.0 2168.1030342670497 2168.1030342670497 13.287268505095046 0.0 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.8494850021680094 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[H{I|L}]NTV 0.63262 - 95 1 2.103 36077.0 1.0 5739 3653 9393 DOHH2_400M_050219_1,9394 DOHH2_400M_050219_1,9394, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9395 54.817 800.0 92526.0 25 0 9227.9 + 8540 ETEYSFLDY 9 106 583.7481043535539 1165.4816557739075 2 583.7487060427666 MULTI CID FTMS 0 0 0 9393 95186.3359375 1.0 0 0.0 2 Unmodified _ETEYSFLDY_ ENSG00000214078|ENST00000397443|CPNE1;ENST00000483495.5_1_20:34218821-34220289:-|nuORF 50.855029805455786 0.0384952370514206 1 {[YD]|[{M(Oxidation (M))|F}M]}[PA]EY 6 7 28.746 0.0 0.0 2.4664 0.0 0.0 0.0 424.1749290495515 424.1749290495515 7.7765162525916764 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.3807196863200843 0.0 {[YD]|[{M(Oxidation (M))|F}M]}[PA]EY 2.4664 - 289 1 2.103 61894.9 0.3899999856948852 5740 3653 9393 DOHH2_400M_050219_1,9395 DOHH2_400M_050219_1,9395,ETEYSFLDY True True ETEYSFLDY 54.816581 583.748706042767 511304.0625 9393.0 ENST00000483495.5_1_20:34218821-34220289:-|nuORF;;ENSG00000214078|ENST00000397443|CPNE1 6.662663300832112 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9397 54.826 330.0 191140.0 25 0 20556.0 + 45397 YTAVVPLVY 9 101 512.7894182974595 1023.5642836617192 2 512.7896606326103 MULTI CID FTMS 0 0 0 9396 134251.59375 0.0553988276220433 9 -0.11114501953125 1 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 89.42679046578446 0.015225546354407 1 [YT]AVVP{I|L}VY 9 0 + 71.621 0.0 0.0 6.9972 6.9972 92.612 0.0 0.0 0.0 15.253312076568903 50.1059905927697 15.253312076568903 11.651051905782488 0 1.242992819099939 1.3010299956639813 1.8098943791441968 0.0 + + [YT]AVVP{I|L}VY;[YT]AVP{I|L}VVY;[YT]AVPV{I|L}VY;[YT]A[{I|L}P]VVVY;[{I|L}P]VY[TA]VVY;[YT]{I|L}{I|L}[PG]VVY;[{I|L}P]Y[TA]VVVY;[{I|L}P]VY{[SA]|[TG]}{I|L}VY;[{I|L}P]YV[TA]VVY;[{I|L}P]Y{[SA]|[TG]}{I|L}VVY 6.9972;5.859;5.1929;4.3143;4.0632;4.0158;3.5797;3.3971;3.3803;3.2452 +;-;-;-;-;-;-;-;-;- + 504 1 2.103 54857.6 1.0 5741 3654 9396 DOHH2_400M_050219_1,9397 DOHH2_400M_050219_1,9397,YTAVVPLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9398 54.84 800.0 170850.0 25 0 9258.1 + 19348 LEPEELYQTF 10 135 634.8059522517588 1267.5973515703174 2 634.8064453005791 MULTI CID FTMS 0 0 0 9396 93358.8359375 0.2971687635877782 -10 0.4740829467773437 2 Unmodified _LEPEELYQTF_ ENSG00000167658|ENST00000309311|EEF2 85.64151623876279 0.0124443716933876 1 [EP]E{I|L}E{I|L}Y 7 5 55.271 0.0 0.0 4.3603 0.0 0.0 0.0 391.16177963111744 391.16177963111744 15.421685972471543 0.0 0.0 0.0 0 0.5228787452803376 1.3010299956639813 1.584121882396211 0.0 [EP]E{I|L}E{I|L}Y 4.3603 - 3952 1 2.103 107634.6 0.3899999856948852 5742 3654 9396 DOHH2_400M_050219_1,9398 DOHH2_400M_050219_1,9398,LEPEELYQTF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9401 54.861 800.0 112050.0 25 0 15138.0 + -1 EAFVRAFL 8 90 476.6239220727194 1426.8499368183584 3 476.9582092165947 MULTI CID FTMS 0 0 0 9400 43640.15625 0.3854730711458023 -4 0.0589408874511718 1 Oxidation (M) _KKYGKIFRM(Oxidation (M))KL_ ENST00000586136.5_1_19:30097284-30104129:+|nuORF;ENST00000588551.5_1_19:30097225-30101540:+|nuORF;ENSG00000105171|ENST00000585603|POP4 1.214830529360525 0.8694162858786273 1 A{M(Oxidation (M))|F}V{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L} 7 -1 13.778 0.0 0.0 0.9656 0.0 0.0 604.3766834998022 0.0 604.3766834998022 0.0 2.8085758581099896 0.0 0.0 0 0.0 0.0 0.0 0.0 A{M(Oxidation (M))|F}V{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L} 0.9656 - 76 + 1 2.103 80228.2 0.8999999761581421 5743 3656 9400 DOHH2_400M_050219_1,9401 DOHH2_400M_050219_1,9401,KKYGKIFRMKL False False EAFVRAFL 54.860714 476.6242 1544821.5 9400.0 ENST00000586136.5_1_19:30097284-30104129:+|nuORF;;ENST00000588551.5_1_19:30097225-30101540:+|nuORF;;ENSG00000105171|ENST00000585603|POP4 4.821165402730306 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9402 54.875 800.0 107210.0 25 0 12642.0 + 7019 EEKYPYMVEW 10 102 687.3078479870782 1372.6011430409562 2 687.3076660037041 MULTI CID FTMS 0 0 0 9400 92077.7265625 0.9227474756648376 -5 0.0630111694335937 2 Unmodified _EEKYPYMVEW_ ENSG00000122643|ENST00000610140|NT5C3A;ENST00000441170.1_1_4:118496697-118497264:-|nuORF;nc|ENSG00000122643|Q9H0P0-1|NT5C3A;nc|ENSG00000122643|Q9H0P0-2|NT5C3A;nc|ENSG00000122643|Q9H0P0-3|NT5C3A;nc|ENSG00000122643|Q9H0P0|NT5C3A 63.960520009940105 0.0261970246776379 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MVYKEEEW 10 7 + 68.097 0.0 0.0 4.9612 4.9612 73.777 0.0 0.0 0.0 12.940902011015789 4.4858408651094095 4.4858408651094095 0.3840962142189141 0 0.8494850021680094 1.0 0.9247425010840048 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MVYKEEEW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MR{[{M(Oxidation (M))|F}D]|MM}MVEW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MVE[TA]{M(Oxidation (M))|F}TEW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MYVKEEEW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MVE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YEW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MVY[VG]MVE[VS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MVE[YK]EEW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MVY[VG]TEEW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MYV[VG]MVE{[DA]|[EG]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MV[WD]MV{M(Oxidation (M))|F}W 4.9612;4.9332;4.8604;4.8329;4.7065;4.6343;4.5429;4.5295;4.5061;4.4361 -;-;-;-;-;-;-;-;-;- 3472 1 2.103 69741.0 0.3700000047683716 5744 3656 9400 DOHH2_400M_050219_1,9402 DOHH2_400M_050219_1,9402,EEKYPYMVEW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9406 54.899 800.0 120320.0 25 0 16964.0 + 45490 YTMKEVLFY 9 120 597.2991887829814 1192.5838246327628 2 597.2994262576103 MULTI CID FTMS 0 0 0 9405 94186.4140625 0.8652822660665986 -3 0.0381393432617187 1 Unmodified _YTMKEVLFY_ ENSG00000135679|ENST00000258149|MDM2;ENST00000493419.1_1_12:69202221-69210726:+|nuORF;nc|ENSG00000135679|Q00987-10|MDM2;nc|ENSG00000135679|Q00987-7|MDM2;nc|ENSG00000135679|Q00987|MDM2 57.72198328787511 0.0273433238377839 1 [YT][QP]YV{I|L}{M(Oxidation (M))|F}Y 9 3 + 71.379 0.0 0.0 5.9852 5.9852 85.035 0.0 0.0 0.0 18.978627114749926 14.137342758552691 14.137342758552691 6.867355479190067 0 0.9247425010840048 2.0 1.4049471895720984 0.0 [YT][QP]YV{I|L}{M(Oxidation (M))|F}Y;[YT][MT][VG]V{I|L}{M(Oxidation (M))|F}Y;[YT][QP]Y{I|L}V{M(Oxidation (M))|F}Y;[YT][QP]YV{M(Oxidation (M))|F}{I|L}Y;[YT][MT][VG]{I|L}V{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}{I|L}KMTY{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}VKMTY{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}[HM]RV{I|L}{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}[WH]EV{I|L}{M(Oxidation (M))|F}Y;[YT][MT][VG]V{M(Oxidation (M))|F}{I|L}Y 5.9852;5.4094;5.1612;4.8098;4.5853;4.3939;4.3407;4.3007;4.2756;4.2339 -;-;-;-;-;-;-;-;-;- 1399 1 2.103 72460.0 0.9300000071525574 5745 3659 9405 DOHH2_400M_050219_1,9406 DOHH2_400M_050219_1,9406,YTMKEVLFY True True YTMKEVLFY 54.898889 597.29942625761 515089.3125 9405.0 nc|ENSG00000135679|Q00987-10|MDM2;;ENST00000493419.1_1_12:69202221-69210726:+|nuORF;;ENSG00000135679|ENST00000258149|MDM2;;nc|ENSG00000135679|Q00987|MDM2;;nc|ENSG00000135679|Q00987-7|MDM2 6.671824296315511 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9407 54.905 325.0 247060.0 25 0 12808.0 + 35289 SSMEGVTFL 9 87 970.454923861204 969.447647394604 1 970.4564086794852 MULTI CID FTMS 0 0 0 9405 178960.640625 0.3629123237099013 -9 0.1096267700195312 2 Unmodified _SSMEGVTFL_ ENSG00000102699|ENST00000381989|PARP4 81.61307344734483 0.0171259190214613 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSGVT{M(Oxidation (M))|F}{I|L} 9 4 + 65.24 0.0 0.0 6.7296 6.7296 82.614 0.0 0.0 0.0 1.271211393095243 34.8900168563065 1.271211393095243 2.5527250510330504 0 1.0994850021680094 0.0 2.004432191740108 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSGVT{M(Oxidation (M))|F}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}ESGVT{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{[CA]|SS}VT{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSGTV{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GV{[CA]|SS}T{M(Oxidation (M))|F}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}ESGTV{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSKE{M(Oxidation (M))|F}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}ESKE{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VG{[CA]|SS}T{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{[CA]|SS}TV{M(Oxidation (M))|F}{I|L} 6.7296;6.4662;5.6848;5.1369;4.9361;4.8736;4.8171;4.5538;4.1335;4.0921 -;-;-;-;-;-;-;-;-;- 1568 1 2.103 58814.4 1.0 5746 3659 9405 DOHH2_400M_050219_1,9407 DOHH2_400M_050219_1,9407,SSMEGVTFL True True SSMEGVTFL 54.904843 970.456408679485 2666913.0 9405.0 ENSG00000102699|ENST00000381989|PARP4 1.7452480792999268 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9410 54.924 703.0 155710.0 25 0 15163.0 + 29501 QLLEKVIEL 9 130 542.8340614147392 1083.6535698962782 2 542.8342773318291 MULTI CID FTMS 0 0 0 9409 79456.1796875 0.5783676850816332 -2 0.0264205932617187 1 Unmodified _QLLEKVIEL_ ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;nc|ENSG00000093144|Q9NTX5-4|ECHDC1;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1 126.56589448801844 0.0036077350702044 1 {[QN]|[E{I|L}]|[KN]}KV{I|L}{M(Oxidation (M))|F}{I|L} 7 3 46.801 0.0 0.0 4.3188 0.0 0.0 0.0 238.1177728509812 238.1177728509812 18.95992346919172 0.0 0.0 0.0 0 0.6307196863200843 1.154901959985743 1.0228787452803376 0.0 {[QN]|[E{I|L}]|[KN]}KV{I|L}{M(Oxidation (M))|F}{I|L} 4.3188 - 1432 1 2.103 83968.2 1.0 5747 3661 9409 DOHH2_400M_050219_1,9410 DOHH2_400M_050219_1,9410,QLLEKVIEL True True QLLEKVIEL 54.923674 542.834277331829 667946.0 9409.0 nc|ENSG00000093144|Q9NTX5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;;ENSG00000093144|ENST00000454859|ECHDC1;;nc|ENSG00000093144|Q9NTX5-4|ECHDC1 4.72446886698405 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9413 54.939 480.0 215060.0 25 0 17667.0 + 3845 DAKIRIFDL 9 110 545.816191524709 1089.617830116218 2 545.8165161013603 MULTI CID FTMS 0 0 0 9412 92755.671875 0.1188055100611466 -11 0.1423187255859375 1 Unmodified _DAKIRIFDL_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000482732.1_1_X:153627802-153628024:+|nuORF;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 59.05245873256422 0.0266066919017776 1 DAK{I|L}{I|L}Y 6 4 60.896 0.0 0.0 5.5887 0.0 0.0 0.0 383.20749841861567 383.20749841861567 10.300084529637983 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.0 0.0 DAK{I|L}{I|L}Y 5.5887 - 347 + 1 2.103 85260.1 1.0 5748 3663 9412 DOHH2_400M_050219_1,9413 DOHH2_400M_050219_1,9413,DAKIRIFDL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9414 54.953 800.0 132480.0 25 0 8557.7 + 5569 DMRIKVMIL 9 114 559.8244882517333 1117.6344235702666 2 559.8254272341728 MULTI CID FTMS 0 0 0 9412 97863.7734375 0.9977826102575504 -3 0.0228958129882812 2 Unmodified _DMRIKVMIL_ ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188 34.93206674587334 0.1032771302489716 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]KVM{I|L}{I|L} 9 2 + 55.058 0.0 0.0 4.9263 4.9263 76.433 0.0 0.0 0.0 14.34882755080853 31.836565238925765 14.34882755080853 2.430380486862944 0 0.75 1.6989700043360187 0.4247425010840047 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]KVM{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]DVM{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]KMV{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]KV{I|L}M{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]DMV{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]DV{I|L}M{I|L};{[ET]|[MV]}{[RE]|[WV]}KVM{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WK][{I|L}A]M{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]K{I|L}VM{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]D{I|L}VM{I|L} 4.9263;4.7089;3.9209;3.7827;3.7034;3.5652;3.2944;3.1619;2.864;2.6465 -;-;-;-;-;-;-;-;-;- 583 1 2.103 85272.0 0.4000000059604645 5749 3663 9412 DOHH2_400M_050219_1,9414 DOHH2_400M_050219_1,9414,DMRIKVMIL True True DMRIKVMIL 54.952616 559.825427234173 458485.8125 9412.0 ENST00000477069.5_1_9:131747266-131765892:+|nuORF;;ENSG00000095319|ENST00000372577|NUP188;;nc|ENSG00000095319|Q5SRE5-2|NUP188 4.689842383066813 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9415 54.966 800.0 197410.0 25 0 28863.0 -1 0 101 886.3914696123974 2656.152579437392 3 886.7275878787041 MULTI CID FTMS 0 0 0 9412 82417.2890625 0.4669761334030723 -7 0.0833778381347656 3 1 [Y{I|L}]SD{I|L}{I|L} 6 -1 38.884 0.0 0.0 1.4639 0.0 0.0 0.0 1948.7547272247543 1948.7547272247543 22.685734900656307 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8494850021680094 0.0 [Y{I|L}]SD{I|L}{I|L} 1.4639 - 160 1 2.103 111700.3 0.4099999964237213 5750 3663 9412 DOHH2_400M_050219_1,9415 DOHH2_400M_050219_1,9415, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9418 54.985 674.0 194460.0 25 0 16308.0 + 11074 GEDTFVHIW 9 139 552.2615897176496 1102.508626502099 2 552.2618286013603 MULTI CID FTMS 0 0 0 9417 112495.8203125 0.57047805063577 -5 0.0656776428222656 1 Unmodified _GEDTFVHIW_ ENSG00000005448|ENST00000348227|WDR54;ENST00000468778.5_1_2:74650926-74652825:+|nuORF;nc|ENSG00000005448|Q9H977-3|WDR54;nc|ENSG00000005448|Q9H977-4|WDR54 97.07464715276576 0.0121042244793311 1 {[DA]|[EG]}DT{M(Oxidation (M))|F}VH{I|L}W 9 0 + 81.877 0.0 0.0 7.4264 7.4264 96.352 0.0 0.0 0.0 33.284634594678266 11.478174818886371 11.478174818886371 33.82190971075161 0 1.947621246364342 2.0 0.3807196863200844 0.0 + + {[DA]|[EG]}DT{M(Oxidation (M))|F}VH{I|L}W;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}D[YR]{M(Oxidation (M))|F};{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}HVD{[ET]|[MV]};WDT{M(Oxidation (M))|F}V[EP][{I|L}P];[HV]{M(Oxidation (M))|F}TD{I|L}{[DA]|[EG]}W;[HV]{M(Oxidation (M))|F}TD{I|L}W{[DA]|[EG]};[HV]{M(Oxidation (M))|F}TD{[DA]|[EG]}{I|L}W;[HV]{M(Oxidation (M))|F}TDW{I|L}{[DA]|[EG]};{[DA]|[EG]}[Y{I|L}]H{I|L}{[DA]|[EG]}W;{[DA]|[EG]}[Y{I|L}]H{I|L}W{[DA]|[EG]} 7.4264;4.3587;4.018;3.9683;3.8793;3.8793;3.8717;3.8717;3.8497;3.8497 +;-;-;-;-;-;-;-;-;- + 722 + 1 2.103 102260.6 1.0 5751 3665 9417 DOHH2_400M_050219_1,9418 DOHH2_400M_050219_1,9418,GEDTFVHIW True True GEDTFVHIW 54.984818 552.26182860136 1209191.75 9417.0 ENSG00000005448|ENST00000348227|WDR54;;ENST00000468778.5_1_2:74650926-74652825:+|nuORF;;nc|ENSG00000005448|Q9H977-3|WDR54;;chr2:74425228-74425417|13|31.46|0.42|6.21|+|0|None,WDR54|1;;nc|ENSG00000005448|Q9H977-4|WDR54 5.555724541346232 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9421 55.005 800.0 160110.0 25 0 11237.0 + 35192 SSDGAISLLTY 11 154 563.7848392487559 1125.5551255643118 2 563.7853881716728 MULTI CID FTMS 0 0 0 9420 130519.6484375 0.4019887700706666 9 -0.167022705078125 1 Unmodified _SSDGAISLLTY_ ENSG00000157020|ENST00000350697|SEC13;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;ENST00000482647.5_1_3:10353516-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 78.7280429016045 0.0086025745061204 1 {I|L}S{I|L}SMY 6 7 39.857 0.0 0.0 3.5411 0.0 0.0 413.21486785122426 0.0 413.21486785122426 0.0 11.385404602398395 0.0 0.0 0 0.0 0.0 1.285666875892183 0.0 {I|L}S{I|L}SMY 3.5411 - 1881 + 1 2.103 99075.9 0.5199999809265137 5752 3667 9420 DOHH2_400M_050219_1,9421 DOHH2_400M_050219_1,9421,SSDGAISLLTY True True SSDGAISLLTY 55.005211 563.785388171673 3597564.5 9420.0 ENSG00000157020|ENST00000350697|SEC13;;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;;nc|ENSG00000157020|P55735-2|SEC13;;nc|ENSG00000157020|P55735-3|SEC13;;nc|ENSG00000157020|P55735-4|SEC13;;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;;ENST00000482647.5_1_3:10353516-10354476:-|nuORF 7.092779477437337 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9424 55.021 519.0 150390.0 25 0 16204.0 + 3847 DAKIRIFDL 9 96 364.2133784367253 1089.618305910376 3 364.2128173708916 MULTI CID FTMS 0 0 0 9423 76130.7109375 0.5061454874209116 -6 0.0815353393554687 1 Unmodified _DAKIRIFDL_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000482732.1_1_X:153627802-153628024:+|nuORF;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 23.78978130925829 0.2284941198415988 1 {[DA]|[EG]}[RK]{I|L}{I|L}{M(Oxidation (M))|F}D{I|L} 9 2 + 58.394 0.0 0.0 5.3592 5.3592 78.694 0.0 0.0 0.0 13.133637307377056 36.510234424404686 13.133637307377056 3.0102999566398125 0 0.7302046884880937 1.6989700043360187 0.0 0.0 {[DA]|[EG]}[RK]{I|L}{I|L}{M(Oxidation (M))|F}D{I|L};{[DA]|[EG]}[K{I|L}]R{I|L}{M(Oxidation (M))|F}D{I|L};[KA][RD]{I|L}{I|L}{M(Oxidation (M))|F}D{I|L};[KA]{NN|[MP]|[D{I|L}]|[EV]}R{I|L}{M(Oxidation (M))|F}D{I|L};[{M(Oxidation (M))|F}V]AK{I|L}{[RE]|[WV]}D{I|L};{[SA]|[TG]}[R{I|L}][VG]{I|L}{M(Oxidation (M))|F}D{I|L} 5.3592;5.0829;3.5963;3.3201;3.3124;2.9911 -;+;-;-;-;- + 163 1 2.103 67285.0 1.0 5753 3669 9423 DOHH2_400M_050219_1,9424 DOHH2_400M_050219_1,9424,DAKIRIFDL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9427 55.041 800.0 354980.0 25 0 21908.0 + 629 AELDPSIAVGF 11 124 1118.5731905334935 1117.5659140668938 1 1118.571337878704 MULTI CID FTMS 0 0 0 9426 173522.75 0.4466311199624853 -4 0.0361480712890625 1 Unmodified _AELDPSIAVGF_ ENSG00000168397|ENST00000404914|ATG4B;ENST00000460211.5_1_2:242607386-242610957:+|nuORF;ENST00000475693.1_1_2:242607884-242611676:+|nuORF;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;nc|ENSG00000168397|Q9Y4P1-6|ATG4B 118.0683919894846 0.0345178255955785 1 [PS]{I|L}ADE{I|L}AVG{M(Oxidation (M))|F} 11 5 + 112.62 0.0 0.0 10.078 10.078 88.676 0.0 0.0 0.0 25.683853478536 16.575773191777955 16.575773191777955 3.979400086720389 0 0.5649093276264391 1.154901959985743 3.071333751784365 0.0 [PS]{I|L}ADE{I|L}AVG{M(Oxidation (M))|F};[PS]{I|L}AVEEAVG{M(Oxidation (M))|F};[PS]{I|L}AED{I|L}AVG{M(Oxidation (M))|F};[PS]{I|L}ADE{I|L}G{I|L}G{M(Oxidation (M))|F};[PS]{I|L}ADEA{I|L}VG{M(Oxidation (M))|F};[PS]{I|L}DAE{I|L}AVG{M(Oxidation (M))|F};[PS]{I|L}AVAEEVG{M(Oxidation (M))|F};[PS]{I|L}AVEEG{I|L}G{M(Oxidation (M))|F};[PS]{I|L}AVEAEVG{M(Oxidation (M))|F};[PS]{I|L}AD{I|L}EAVG{M(Oxidation (M))|F} 10.078;9.7215;9.6506;9.5441;9.3259;9.3214;9.2466;9.188;9.1599;9.1394 -;-;-;-;-;-;-;-;-;- 25943 1 2.103 173417.2 0.7200000286102295 5754 3671 9426 DOHH2_400M_050219_1,9427 DOHH2_400M_050219_1,9427,AELDPSIAVGF True True AELDPSIAVGF 55.041394 1118.5713378787 2319940.0 9426.0 nc|ENSG00000168397|Q9Y4P1-6|ATG4B;;ENSG00000168397|ENST00000404914|ATG4B;;ENST00000475693.1_1_2:242607884-242611676:+|nuORF;;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;;ENST00000460211.5_1_2:242607386-242610957:+|nuORF 7.7478413581848145 1.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9428 55.055 800.0 183570.0 25 0 23622.0 + -1 MEVILLML 8 111 502.2837598494048 1002.5529667656097 2 502.2838317751884 MULTI CID FTMS 0 0 0 9426 87187.015625 0.1040834942284076 -12 0.142486572265625 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MEVILLML_ REV__ENST00000418596.7_1_2:201838679-201838826:-|nuORF 18.13498045792455 0.6430038125133779 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NG]V{I|L}{I|L}M{I|L} 9 -1 + 62.91 0.0 0.0 6.275 6.275 92.958 0.0 0.0 0.0 16.14393726401687 50.6914468044949 16.14393726401687 23.357921019231924 0 0.8807196863200843 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NG]V{I|L}{I|L}M{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[NP]V{I|L}{I|L}M{I|L};[{I|L}T]{[WN]|[YH]}{I|L}{I|L}M{I|L};[YV]{I|L}{I|L}V{[WN]|[YH]}P;[YV]{I|L}{I|L}{[WN]|[YH]}VP 6.275;3.9451;3.7129;2.3625;1.6653 -;-;-;-;- 70 1 2.103 115450.5 0.3700000047683716 5755 3671 9426 DOHH2_400M_050219_1,9428 DOHH2_400M_050219_1,9428,MEVILLML False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9429 55.069 800.0 29080.0 25 0 1057.5 -1 0 58 851.1880040464733 0 851.2427856326103 PEAK CID FTMS 0 0 0 -1 0 3 1 T 1 -1 6.9897 0.0 0.0 0.41107 0.0 0.0 1178.175494321659 418.1133211725219 1596.2888154941809 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.41107 - 7 + 1 2.103 26375.1 0.4000000059604645 5756 3671 9426 DOHH2_400M_050219_1,9429 DOHH2_400M_050219_1,9429, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9431 55.087 800.0 197420.0 25 0 10916.0 -1 0 141 1086.8612187963988 3257.5618269893966 3 1087.528979480267 MULTI CID FTMS 0 0 0 9430 258633.90625 0.9806601193624648 1 -0.02581787109375 1 1 {M(Oxidation (M))|F}N[{I|L}P]{I|L}VM{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 48.944 0.0 0.0 1.5025 0.0 0.0 2182.0633075805194 0.0 2182.0633075805194 0.0 17.485739448312785 0.0 0.0 0 1.0 0.0 0.0 0.7059771852360797 {M(Oxidation (M))|F}N[{I|L}P]{I|L}VM{[QD]|[EN]|[WG]|[KD]|[RS]} 1.5025 - 761 1 2.103 102735.5 0.8100000023841858 5757 3672 9430 DOHH2_400M_050219_1,9431 DOHH2_400M_050219_1,9431, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9432 55.095 453.0 155650.0 25 0 14947.0 -1 0 79 1092.5241712377394 0 1092.518725574017 PEAK CID FTMS 0 0 0 9430 117168.1171875 1.0 0 0.0 2 1 PPPPPY 6 -1 37.652 0.0 0.0 1.7247 0.0 0.0 1340.6033891982318 191.08297144107652 1531.6863606393083 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 PPPPPY 1.7247 - 711 + 1 2.103 52794.8 1.0 5758 3672 9430 DOHH2_400M_050219_1,9432 DOHH2_400M_050219_1,9432, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9434 55.108 591.0 235360.0 25 0 14126.0 + 19349 LEPEELYQTF 10 115 634.8059522517588 1267.5973515703174 2 634.8062621951103 MULTI CID FTMS 0 0 0 9433 171040.265625 0.544435068722725 9 -0.1580276489257812 1 Unmodified _LEPEELYQTF_ ENSG00000167658|ENST00000309311|EEF2 65.23502041540118 0.0228537820337083 1 [EP]E{I|L}YQT{M(Oxidation (M))|F} 8 2 68.646 0.0 0.0 5.4154 0.0 0.0 0.0 257.1156279515622 257.1156279515622 33.36289411280353 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.7009697768504046 0.7302046884880937 + [EP]E{I|L}YQT{M(Oxidation (M))|F} 5.4154 + + 3244 1 2.103 108519.7 1.0 5759 3673 9433 DOHH2_400M_050219_1,9434 DOHH2_400M_050219_1,9434,LEPEELYQTF True True LEPEELYQTF 55.107771 634.80626219511 4556576.0 9433.0 ENSG00000167658|ENST00000309311|EEF2 6.352041721343994 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9435 55.122 800.0 159850.0 25 0 33366.0 + 32904 SEIPGALW 8 110 872.451951019102 871.444674552502 1 872.4492065310478 MULTI CID FTMS 0 0 0 9433 83169.65625 0.70812206950637 -13 0.190032958984375 2 Unmodified _SEIPGALW_ ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C 74.39630413441286 0.1057069479668299 1 [QP]{I|L}SE{I|L}W 7 5 + 50.934 0.0 0.0 5.8448 5.8448 78.274 0.0 0.0 0.0 1.3324944589368215 6.082224491228239 1.3324944589368215 1.3324944589368215 0 0.7614393726401688 0.0 0.7302046884880937 0.2742275032520141 [QP]{I|L}SE{I|L}W;{[ES]|[DT]|[{I|L}C]}{I|L}PQ{I|L}W;{[ES]|[DT]|[{I|L}C]}{I|L}PGA{I|L}W;[PG]A{I|L}SE{I|L}W;{[ES]|[DT]|[{I|L}C]}[QP]{I|L}{I|L}W;[NP]{[ET]|[MV]}{I|L}{I|L}W;[QT][DP]{I|L}{I|L}W;[PG]G{[ET]|[MV]}{I|L}{I|L}W;{[QN]|[E{I|L}]|[KN]}SPQ{I|L}W;[QP]{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}W 5.8448;5.6919;5.3324;5.2959;5.2725;4.4396;4.384;4.2054;3.7911;3.4744 -;-;+;-;-;-;-;-;-;- + 478 1 2.103 87612.7 0.4000000059604645 5760 3673 9433 DOHH2_400M_050219_1,9435 DOHH2_400M_050219_1,9435,SEIPGALW True True SEIPGALW 55.121621 872.449206531048 4046906.5 9433.0 nc|ENSG00000171988|Q15652-3|JMJD1C;;ENSG00000171988|ENST00000399262|JMJD1C 6.035796165466309 1.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9438 55.142 800.0 172040.0 25 0 13302.0 + 302 ADTPAIMNW 9 136 509.73662303914847 1017.458693145097 2 509.7372314333916 MULTI CID FTMS 0 0 0 9437 102241.4296875 0.7223599636846803 -4 0.1006546020507812 1 Unmodified _ADTPAIMNW_ ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL 74.42276476219924 0.019389277360085 1 {[DA]|[EG]}T[PA]{I|L}MNW 9 0 {[DA]|[EG]}T[PA]{I|L} + + 25.498 17.425 3.0663 2.5061 2.5061 49.518 0.0 0.0 0.0 0.0 3.12928173584271 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.805462187404089 + + {[DA]|[EG]}T[PA]{I|L}MNW 2.5061 + + 635 + 1 2.103 111932.9 0.3899999856948852 5761 3675 9437 DOHH2_400M_050219_1,9438 DOHH2_400M_050219_1,9438,ADTPAIMNW True True ADTPAIMNW 55.141996 509.737231433392 993051.25 9437.0 ENSG00000138078|ENST00000409411|PREPL;;nc|ENSG00000138078|Q4J6C6|PREPL;;nc|ENSG00000138078|Q4J6C6-2|PREPL 4.805543263753255 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9439 55.156 800.0 93334.0 25 0 4082.3 -1 TCLLFMTLC 9 118 1158.5360262628956 1157.5287497962956 1 1159.200122058392 MULTI CID FTMS 0 0 0 9437 101191.1875 0.8025583776122627 1 -0.0302200317382812 2 2 Carbamidomethyl (C) _TC(Carbamidomethyl (C))LLFMTLC(Carbamidomethyl (C))_ ENSG00000214688|ENST00000441508|C10orf105 4.3292370932331545 0.7635526921153418 1 ANQQAE 6 -1 23.99 0.0 0.0 2.0725 0.0 0.0 65.06944189090002 448.15986047916255 513.2293023700626 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ANQQAE 2.0725 - 585 + 1 2.103 50339.1 0.5699999928474426 5762 3675 9437 DOHH2_400M_050219_1,9439 DOHH2_400M_050219_1,9439,TCLLFMTLC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9442 55.176 800.0 222340.0 25 0 15862.0 + 3867 DAKQKWLLL 9 156 557.8345065934508 1113.6544602537017 2 557.8340942263603 MULTI CID FTMS 0 0 0 9441 135053.046875 0.4815837592616922 -7 0.1389312744140625 1 Unmodified _DAKQKWLLL_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 125.52916310638032 0.0024920486013546 1 {[DA]|[EG]}KQ{I|L}KW{I|L}{I|L} 9 2 + 97.582 0.0 0.0 8.7623 8.7623 84.821 0.0 0.0 0.0 23.579634678231457 13.26606256887672 13.26606256887672 1.7339374311232802 0 1.9049471895720984 1.6989700043360187 1.0387254899964358 1.2104093769761874 {[DA]|[EG]}KQ{I|L}KW{I|L}{I|L};{[DA]|[EG]}KQK{I|L}W{I|L}{I|L};{[DA]|[EG]}KQKW{I|L}{I|L}{I|L};{[DA]|[EG]}K[AG]{I|L}KW{I|L}{I|L};{[DA]|[EG]}K[AG]K{I|L}W{I|L}{I|L};{[DA]|[EG]}K[AG]KW{I|L}{I|L}{I|L};{[DA]|[EG]}KQ{I|L}K{I|L}W{I|L};{[DA]|[EG]}KQK{I|L}{I|L}W{I|L};{[DA]|[EG]}KQ{I|L}{I|L}KW{I|L};{[DA]|[EG]}K[AG]{I|L}K{I|L}W{I|L} 8.7623;8.6066;8.3683;7.9355;7.7798;7.5415;7.5095;7.3538;7.2059;6.6826 -;-;+;-;-;-;-;-;-;- + 7130 1 2.103 133102.9 0.449999988079071 5763 3677 9441 DOHH2_400M_050219_1,9442 DOHH2_400M_050219_1,9442,DAKQKWLLL True True DAKQKWLLL 55.176268 557.83409422636 1374907.625 9441.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 6.1122439702351885 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9443 55.19 800.0 225960.0 25 0 16011.0 + 43919 YGGLIFNSY 9 98 1033.499303039686 1032.4920265730862 1 1033.501147449017 MULTI CID FTMS 0 0 0 9441 196879.171875 0.7788463268005789 5 -0.0930252075195312 2 Unmodified _YGGLIFNSY_ ENSG00000198712|ENST00000361739|MT-CO2 147.8311659463005 0.0308244065875608 1 [YN]{I|L}{I|L}{M(Oxidation (M))|F}NSY 8 2 + 63.568 0.0 0.0 6.1567 6.1567 80.065 0.0 0.0 0.0 1.7609125905568137 12.609309280316907 1.7609125905568137 1.7609125905568137 0 1.2971062485323517 0.0 0.3252574989159953 1.0 [YN]{I|L}{I|L}{M(Oxidation (M))|F}NSY;{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}{M(Oxidation (M))|F}NSY;[YG]G{I|L}{I|L}{M(Oxidation (M))|F}NSY;[YN]{I|L}{M(Oxidation (M))|F}{I|L}NSY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}Y{I|L}NSY;{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{I|L}NSY;[YG]G{I|L}{M(Oxidation (M))|F}{I|L}NSY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y{I|L}{I|L}NSY;[YN]{I|L}{I|L}{M(Oxidation (M))|F}GGSY;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Y{M(Oxidation (M))|F}NSY 6.1567;5.9862;5.9095;5.788;5.6768;5.6175;5.5408;5.4414;5.2597;5.2282 -;-;+;-;-;-;-;-;-;- + 4974 1 2.103 119845.8 0.699999988079071 5764 3677 9441 DOHH2_400M_050219_1,9443 DOHH2_400M_050219_1,9443,YGGLIFNSY True True YGGLIFNSY 55.190133 1033.50114744902 1626895.75 9441.0 ENSG00000198712|ENST00000361739|MT-CO2 5.42094357808431 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9445 55.195 93.0 941630.0 25 0 95409.0 + 3846 DAKIRIFDL 9 94 545.816191524709 1089.617830116218 2 545.8166992068291 MULTI CID FTMS 0 0 0 9444 526755.0625 0.674690858386968 4 -0.0627708435058593 1 Unmodified _DAKIRIFDL_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000482732.1_1_X:153627802-153628024:+|nuORF;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 79.42699986076722 0.0176555798755335 1 {[DA]|[EG]}K{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L} 9 0 + 92.762 0.0 0.0 8.5133 8.5133 97.101 0.0 0.0 0.0 22.60348171289557 16.478174818886373 16.478174818886373 22.60348171289557 0 2.305462187404089 1.6989700043360187 0.7134679910804405 0.0 + + {[DA]|[EG]}K{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};[KA]D{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{[TV]|[{I|L}S]}N{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{[SA]|[TG]}[VG]{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]R{I|L}{M(Oxidation (M))|F}D{I|L};{[TV]|[{I|L}S]}GG{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{[SA]|[TG]}R{I|L}[VG]{I|L}{M(Oxidation (M))|F}D{I|L};{[DA]|[EG]}K{I|L}[K{I|L}]{M(Oxidation (M))|F}A{[QG]|[NA]};{I|L}{[CT]|[{M(Oxidation (M))|F}G]}K{I|L}VWD{I|L};{[{M(Oxidation (M))|F}D]|MM}[R{I|L}]{I|L}KAD{I|L} 8.5133;6.4389;6.3499;5.821;5.5106;5.5048;4.4414;4.2435;4.2071;3.9421 +;-;-;-;-;-;-;-;-;- + 367 1 2.103 68463.6 1.0 5765 3678 9444 DOHH2_400M_050219_1,9445 DOHH2_400M_050219_1,9445,DAKIRIFDL True True DAKIRIFDL 55.194918 545.816699206829 8933127.0 9444.0 ENST00000489200.5_1_X:153627802-153628283:+|nuORF;;ENSG00000165496|ENST00000298283|RPL10L;;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;;ENSG00000147403|ENST00000369817|RPL10;;ENST00000482732.1_1_X:153627802-153628024:+|nuORF;;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 5.401290098826091 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9446 55.204 466.0 273930.0 25 0 67289.0 + 5309 DLDLSPLEY 9 93 1064.514942051717 1063.5076655851171 1 1064.517138659954 MULTI CID FTMS 0 0 0 9444 146295.96875 0.7077913394317813 2 -0.0314292907714843 2 Unmodified _DLDLSPLEY_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 115.6920309560759 0.0032017028976397 1 {NN|[MP]|[D{I|L}]|[EV]}DS{I|L}P{I|L}EY 9 2 + 85.703 0.0 0.0 8.0585 8.0585 81.782 0.0 0.0 0.0 8.591153868777681 16.478174818886373 8.591153868777681 0.0134875797167666 0 1.1549471895720984 1.3979400086720375 1.9361818737241727 0.0 {NN|[MP]|[D{I|L}]|[EV]}DS{I|L}P{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}D{I|L}SP{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}SD{I|L}P{I|L}EY;[{I|L}P]ES[DV]{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}DS{I|L}PE{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}D{I|L}SPE{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}S{I|L}DP{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}SD{I|L}PE{I|L}Y;[{I|L}P]SE[DV]{I|L}EY;{[TV]|[{I|L}S]}DD{I|L}P{I|L}EY 8.0585;8.0572;7.8814;7.2507;7.2105;7.2092;7.0639;7.0334;6.5935;6.4494 -;+;-;-;-;-;-;-;-;- + 2273 1 2.103 85751.4 1.0 5766 3678 9444 DOHH2_400M_050219_1,9446 DOHH2_400M_050219_1,9446,DLDLSPLEY True True DLDLSPLEY 55.203668 1064.51713865995 1350766.125 9444.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2 4.879965464274089 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9447 55.218 800.0 36462.0 25 0 2638.5 -1 0 78 935.6475707888604 0 935.6475707888604 PEAK CID FTMS 0 0 0 -1 0 3 1 {I|L} 1 -1 3.9794 0.0 0.0 0.21288 0.0 0.0 1354.017479368933 399.1527193658813 1753.1701987348142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.21288 - 12 + 1 2.103 23991.5 0.8899999856948853 5767 3678 9444 DOHH2_400M_050219_1,9447 DOHH2_400M_050219_1,9447, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9451 55.239 635.0 54846.0 25 0 1949.0 -1 0 74 1098.4364135190665 0 1098.534350574017 PEAK CID FTMS 0 0 0 9450 20034.84375 0.6408548129459439 -1 0.0038528442382812 1 1 N 1 -1 1.5938 0.0 0.0 0.072615 0.0 0.0 1096.813548618408 980.9694918268186 2077.7830404452266 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.072615 - 2 + 1 2.103 27351.7 1.0 5768 3681 9450 DOHH2_400M_050219_1,9451 DOHH2_400M_050219_1,9451, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9452 55.253 800.0 25655.0 25 0 1077.1 -1 0 56 1010.538134753704 0 1010.538134753704 PEAK CID FTMS 0 0 0 -1 0 2 1 T 1 -1 4.6041 0.0 0.0 0.22803 0.0 0.0 1133.561973997839 781.4473360650999 1915.0093100629388 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.22803 - 3 + 1 2.103 25371.0 0.5 5769 3681 9450 DOHH2_400M_050219_1,9452 DOHH2_400M_050219_1,9452, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9455 55.265 281.0 179800.0 25 0 12293.0 + 45349 YSQELSLLY 9 86 1115.5627699151444 1114.5554934485444 1 1115.562426745892 MULTI CID FTMS 0 0 0 9454 114069.4765625 0.6165595832920208 -6 0.0969161987304687 1 Unmodified _YSQELSLLY_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 41.95555342248728 0.0647214845423414 1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}YS{I|L}{I|L}Y 9 4 + 71.213 0.0 0.0 6.3894 6.3894 79.876 0.0 0.0 0.0 1.7609125905568137 16.478174818886373 1.7609125905568137 1.2371250542002343 0 0.2887254899964357 0.0 2.274227503252014 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}YS{I|L}{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SY{I|L}S{I|L}{I|L}Y;{[QS]|[NT]}E{I|L}YS{I|L}{I|L}Y;{[QS]|[NT]}EY{I|L}S{I|L}{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}SYS{I|L}{I|L}Y;{[QS]|[NT]}YE{I|L}S{I|L}{I|L}Y;{[{M(Oxidation (M))|F}C]|[YS]}QE{I|L}S{I|L}{I|L}Y;{[{M(Oxidation (M))|F}C]|[YS]}[AG]E{I|L}S{I|L}{I|L}Y;{[QS]|[NT]}Y[{I|L}T]D{I|L}{I|L}Y;{[{M(Oxidation (M))|F}C]|[YS]}Q[{I|L}T]D{I|L}{I|L}Y 6.3894;6.2784;6.2314;6.1204;5.8602;5.7073;5.5083;4.6821;3.7994;3.6004 -;-;-;-;-;-;+;-;-;- + 644 1 2.103 39242.9 1.0 5770 3683 9454 DOHH2_400M_050219_1,9455 DOHH2_400M_050219_1,9455,YSQELSLLY True True YSQELSLLY 55.264543 1115.56242674589 2026959.1875 9454.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 5.20399538675944 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9456 55.278 800.0 191790.0 25 0 18177.0 + 6796 EEAPKFLAF 9 142 526.2768098417775 1050.539066750355 2 526.2768432497978 MULTI CID FTMS 0 0 0 9454 87254.671875 0.5142922583727113 -3 0.0352325439453125 2 Unmodified _EEAPKFLAF_ ENSG00000007255|ENST00000585934|TRAPPC6A;nc|ENSG00000007255|O75865-2|TRAPPC6A 54.773552608820026 0.0299037012502309 1 EEAPV{[SA]|[TG]}{I|L}[HV] 10 5 + 31.589 0.0 0.0 3.007 3.007 76.396 0.0 0.0 0.0 0.3436334750686143 10.62014972766029 0.3436334750686143 8.455612550363792 0 1.048455006504028 1.5228787452803376 1.274227503252014 0.0 EEAPV{[SA]|[TG]}{I|L}[HV];[KP]{M(Oxidation (M))|F}{I|L}A[HC][HV];[KP]{M(Oxidation (M))|F}{I|L}[HV]A[HC];[KP]A{M(Oxidation (M))|F}{I|L}[HC][HV];[KP]{M(Oxidation (M))|F}{I|L}A[HV][HC];[KP]{M(Oxidation (M))|F}A{I|L}[HC][HV];[KP]A{M(Oxidation (M))|F}{I|L}[HV][HC];[KP]{M(Oxidation (M))|F}A{I|L}[HV][HC];[KP]A{M(Oxidation (M))|F}[HC]{I|L}[HV];[KP]{M(Oxidation (M))|F}A[HC]{I|L}[HV] 3.007;2.2021;2.0617;2.0617;2.0575;2.0387;1.9172;1.8941;1.7752;1.7521 -;-;-;-;-;-;-;-;-;- 1568 1 2.103 123179.8 0.7699999809265137 5771 3683 9454 DOHH2_400M_050219_1,9456 DOHH2_400M_050219_1,9456,EEAPKFLAF True True EEAPKFLAF 55.278376 526.276843249798 863946.5625 9454.0 nc|ENSG00000007255|O75865-2|TRAPPC6A;;ENSG00000007255|ENST00000585934|TRAPPC6A 5.114454825719197 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9459 55.299 800.0 172320.0 25 0 13226.0 + 7102 EEMEWFNNY 9 121 631.2449292070071 1260.475305480814 2 631.2452270388603 MULTI CID FTMS 0 0 0 9458 99097.765625 0.1404425892542699 -6 0.0649032592773437 1 Unmodified _EEMEWFNNY_ ENSG00000101003|ENST00000262460|GINS1 97.07464715276576 0.0121042244793311 1 EEMEW{M(Oxidation (M))|F} 6 3 52.923 0.0 0.0 4.1987 0.0 0.0 0.0 406.1384884244266 406.1384884244266 27.517346757967545 0.0 0.0 0.0 0 0.25 1.3010299956639813 2.305462187404089 0.0 + EEMEW{M(Oxidation (M))|F} 4.1987 + + 994 1 2.103 105313.3 0.4199999868869781 5772 3685 9458 DOHH2_400M_050219_1,9459 DOHH2_400M_050219_1,9459,EEMEWFNNY True True EEMEWFNNY 55.298797 631.24522703886 8313595.0 9458.0 ENSG00000101003|ENST00000262460|GINS1 8.444400787353516 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9460 55.306 402.0 115060.0 25 0 13215.0 + 32759 SEDNPQTLLF 10 79 582.2813982630335 1162.5482435928668 2 582.2817870974541 MULTI CID FTMS 0 0 0 9458 94040.1953125 0.9928895054402463 -1 0.0040359497070312 2 Unmodified _SEDNPQTLLF_ ENSG00000107625|ENST00000373585|DDX50;ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21 32.78568957990786 0.2337485590374503 1 {[MG]|[TS]}[WY]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}{M(Oxidation (M))|F} 9 5 {[MG]|[TS]}[WY]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} + + 25.217 -6.0307 -0.68191 2.1691 2.1691 49.032 0.0 0.0 0.0 0.0 3.72863372572823 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[MG]|[TS]}[WY]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}{M(Oxidation (M))|F} 2.1691 - 131 + 1 2.103 40426.1 1.0 5773 3685 9458 DOHH2_400M_050219_1,9460 DOHH2_400M_050219_1,9460,SEDNPQTLLF False True SEDNPQTLLF 55.305997 582.281787097454 628213.0 9458.0 ENSG00000107625|ENST00000373585|DDX50;;nc|ENSG00000165732|Q9NR30-2|DDX21;;ENSG00000165732|ENST00000354185|DDX21 6.137815475463867 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9462 55.312 77.0 906430.0 25 0 129060.0 + 14145 RGSDVIIML 9 61 502.2837598494048 1002.5529667656097 2 502.2840148806572 MULTI CID FTMS 0 0 0 9461 676600.1875 0.8077224711245041 3 -0.0836944580078125 1 Unmodified _ICAQVIPFL_ ENSG00000175582|ENST00000336083|RAB6A;nc|ENSG00000175582|P20340-2|RAB6A;nc|ENSG00000154917|Q9NRW1-2|RAB6B;nc|ENSG00000175582|P20340-4|RAB6A;ENSG00000154917|ENST00000285208|RAB6B 21.74664581756881 0.2544899275067181 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NG]V{I|L}{I|L}M{I|L} 9 5 + 66.163 0.0 0.0 6.5994 6.5994 93.848 0.0 0.0 0.0 19.396512253176823 55.193409159737854 19.396512253176823 24.71726222832956 0 0.8807196863200843 1.6989700043360187 0.0 0.3252574989159953 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NG]V{I|L}{I|L}M{I|L};[{I|L}T]{[WN]|[YH]}{I|L}{I|L}M{I|L} 6.5994;4.134 -;- 42 1 2.103 61027.4 1.0 5774 3686 9461 DOHH2_400M_050219_1,9462 DOHH2_400M_050219_1,9462,ICAQVIPFL False False RGSDVIIML 55.311655 502.284014880657 9564608.0 9461.0 ENSG00000175582|ENST00000336083|RAB6A;;nc|ENSG00000175582|P20340-2|RAB6A;;nc|ENSG00000154917|Q9NRW1-2|RAB6B;;nc|ENSG00000175582|P20340-4|RAB6A;;ENSG00000154917|ENST00000285208|RAB6B 5.434125741322835 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9463 55.32 477.0 190620.0 25 0 29929.0 + 35692 SVFPRAVAL 9 86 480.2873554689923 958.5601580047846 2 480.2874023318291 MULTI CID FTMS 0 0 0 9461 115539.8046875 0.0594139150809987 -18 0.3007926940917969 2 Unmodified _SVFPRAVAL_ REV__ENSG00000213903|ENST00000345363|LTB4R 37.97399986684836 0.0865783450051559 1 [VS]{M(Oxidation (M))|F}{I|L} 4 -1 43.5 0.0 0.0 4.538 0.0 0.0 0.0 509.2833010542155 509.2833010542155 30.400990676322905 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 [VS]{M(Oxidation (M))|F}{I|L} 4.538 - 65 + 1 2.103 71509.8 1.0 5775 3686 9461 DOHH2_400M_050219_1,9463 DOHH2_400M_050219_1,9463,SVFPRAVAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9464 55.33 590.0 175300.0 25 0 15270.0 + 40650 VLDSFLQGY 9 117 521.2663364900968 1040.5181200469935 2 521.2663452029228 MULTI CID FTMS 0 0 0 9461 98702.40625 0.5257491188831699 -4 0.0531044006347656 3 Unmodified _VLDSFLQGY_ ENSG00000186185|ENST00000593135|KIF18B;nc|ENSG00000186185|Q86Y91-6|KIF18B 50.855029805455786 0.0384952370514206 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}V{I|L} 6 7 37.819 0.0 0.0 3.6346 0.0 0.0 0.0 363.1354655882623 363.1354655882623 15.115911288297482 0.0 0.0 0.0 0 0.3054621874040891 0.9208187539523752 1.0941876774005248 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}V{I|L} 3.6346 - 370 1 2.103 84009.0 1.0 5776 3686 9461 DOHH2_400M_050219_1,9464 DOHH2_400M_050219_1,9464,VLDSFLQGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9465 55.344 800.0 86650.0 25 0 16744.0 -1 0 78 1029.4767448827656 3085.408405248497 3 1029.811938464642 MULTI CID FTMS 0 0 0 9461 70192.9296875 0.8527920800499487 -3 0.0492134094238281 4 1 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YQV 14 -1 44.351 0.0 0.0 1.4374 0.0 0.0 0.0 1452.6693614796204 1452.6693614796204 4.855440835890299 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YQV 1.4374 - 3034 1 2.103 49374.8 0.4199999868869781 5777 3686 9461 DOHH2_400M_050219_1,9465 DOHH2_400M_050219_1,9465, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9467 55.361 800.0 123190.0 25 0 12038.0 -1 0 97 1092.5261300733769 2183.037707213554 2 1093.026782214642 MULTI CID FTMS 0 0 0 9466 32594.177734375 0.2451041067793895 7 -0.1653861999511718 1 1 [QP][QT]PPPP 8 -1 47.638 0.0 0.0 2.1822 0.0 0.0 0.0 1337.5867035794656 1337.5867035794656 24.85422053145658 0.0 0.0 0.0 0 0.5 0.0 0.5242275032520141 1.5 [QP][QT]PPPP 2.1822 - 2260 1 2.103 65259.6 0.4699999988079071 5778 3687 9466 DOHH2_400M_050219_1,9467 DOHH2_400M_050219_1,9467, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9468 55.365 196.0 646050.0 25 0 122370.0 + 45398 YTAVVPLVY 9 66 1024.5713875816175 1023.5641111150176 1 1024.570727527142 MULTI CID FTMS 0 0 0 9466 399237.15625 0.003764382205924 42 -0.7888031005859375 2 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 85.35673624503755 0.0162188719545379 1 [{I|L}P]VYTAVVY 9 6 + 78.299 0.0 0.0 7.6496 7.6496 89.297 0.0 0.0 0.0 6.989700043360188 16.478174818886373 6.989700043360188 6.989700043360188 0 0.4247425010840047 1.6989700043360187 1.1989700043360187 0.0 [{I|L}P]VYTAVVY;[YT]AVVP{I|L}VY;[{I|L}P]VYTG{I|L}VY;[{I|L}P]YVTAVVY;[YT]VAVP{I|L}VY;[YV]TAVP{I|L}VY;[YT]AVP{I|L}VVY;[{I|L}P]YAS{I|L}VVY;[{I|L}P]YVTG{I|L}VY;[YT]VAP{I|L}VVY 7.6496;6.9667;6.842;6.6322;6.4646;6.3872;6.1841;5.9219;5.8246;5.682 -;+;-;-;-;-;-;-;-;- + 974 1 2.103 85603.3 1.0 5779 3687 9466 DOHH2_400M_050219_1,9468 DOHH2_400M_050219_1,9468,YTAVVPLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9469 55.377 700.0 177680.0 25 0 20942.0 + 23795 LVDPWTPHLY 10 100 620.8217342591471 1239.628915585094 2 620.8214599490166 MULTI CID FTMS 0 0 0 9466 95879.7265625 0.496258953207255 -4 0.0875015258789062 3 Unmodified _LVDPWTPHLY_ ENSG00000010292|ENST00000315579|NCAPD2 104.79918948944588 0.0059796167826964 1 {I|L}VDPWTPH{I|L}Y 10 0 + 110.19 0.0 0.0 8.8887 8.8887 86.79 0.0 0.0 0.0 36.53212513775344 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.9247425010840048 2.0 1.5356668758921828 0.0 + + {I|L}VDPWTPH{I|L}Y;{I|L}VDPWTPHY{I|L};{I|L}VDPWTP{[QV]|[N{I|L}]|[RA]|[KV]}W;{I|L}VDP{[DA]|[EG]}TP{[QV]|[N{I|L}]|[RA]|[KV]}W;{I|L}VD[QA]{[QG]|[NA]}PH{I|L}Y;{I|L}VD[QA]{[QG]|[NA]}PHY{I|L};{I|L}V[QA]D{[QG]|[NA]}PH{I|L}Y;{I|L}V[QA]D{[QG]|[NA]}PHY{I|L};{I|L}V{[ET]|[MV]}W{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}Y;{I|L}V{[ET]|[MV]}W{[VA]|[{I|L}G]}{M(Oxidation (M))|F}Y{I|L} 8.8887;8.6459;7.7241;6.9848;5.5986;5.3558;4.7096;4.4668;3.7942;3.5514 +;-;-;-;-;-;-;-;-;- + 1490 + 1 2.103 95759.8 1.0 5780 3687 9466 DOHH2_400M_050219_1,9469 DOHH2_400M_050219_1,9469,LVDPWTPHLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9470 55.386 506.0 34454.0 25 0 1298.1 -1 0 53 1177.062792956829 0 1177.062792956829 PEAK CID FTMS 0 0 0 -1 0 4 1 V 1 -1 3.9794 0.0 0.0 0.16918 0.0 0.0 1337.7897572009645 912.2191866510374 2250.0089438520017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.16918 - 2 + 1 2.103 19373.9 1.0 5781 3687 9466 DOHH2_400M_050219_1,9470 DOHH2_400M_050219_1,9470, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9473 55.4 410.0 195710.0 25 0 28125.0 + 45350 YSQELSLLY 9 116 558.2848987421964 1114.5552445511928 2 558.2853881716728 MULTI CID FTMS 0 0 0 9472 133207.109375 0.9835793881153936 1 -0.0237007141113281 1 Unmodified _YSQELSLLY_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 18.1463463914782 0.3454829746528889 1 {I|L}YYY 4 7 25.918 0.0 0.0 2.3254 0.0 0.0 494.2721157443553 0.0 494.2721157443553 0.0 6.299374434705136 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}YYY 2.3254 - 995 + 1 2.103 63863.2 1.0 5782 3689 9472 DOHH2_400M_050219_1,9473 DOHH2_400M_050219_1,9473,YSQELSLLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9474 55.413 800.0 120410.0 25 0 7791.2 + 9353 FLENVIRDAVTY 12 89 720.380262987023 1438.745973040846 2 720.3806030154228 MULTI CID FTMS 0 0 0 9472 96968.6484375 1.0 0 0.0 2 Unmodified _FILWRHLEYY_ ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000158406|ENST00000377727|H4C8;ENSG00000275126|ENST00000618305|H4C13;ENSG00000273542|ENST00000611927|H4C12;ENSG00000197061|ENST00000377803|H4C3;ENSG00000276966|ENST00000615164|H4C5;ENSG00000278637|ENST00000617569|H4C1;ENSG00000270882|ENST00000578186|H4C14;ENSG00000197238|ENST00000355057|H4C11;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276180|ENST00000615353|H4C9;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16 19.256988751693697 0.5244284437930726 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ENV{I|L}RDAVTY 12 8 + 75.429 0.0 0.0 5.2427 5.2427 76.099 0.0 0.0 0.0 1.4596027930848263 16.61181443446619 1.4596027930848263 1.4596027930848263 0 3.136500636031869 0.0 0.4247425010840047 0.3494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ENV{I|L}RDAVTY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V{M(Oxidation (M))|F}{I|L}RDAVTY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V{M(Oxidation (M))|F}{I|L}RWVTY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V{M(Oxidation (M))|F}[KG][QA]AVTY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V[RD]A{I|L}{M(Oxidation (M))|F}VTY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VAAEA{I|L}{M(Oxidation (M))|F}VTY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V[HM]{I|L}VN[HA]Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V[WR]{I|L}{M(Oxidation (M))|F}VTY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V[RD]AV{I|L}{M(Oxidation (M))|F}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VAAEAV{I|L}{M(Oxidation (M))|F}TY 5.2427;5.1412;4.6817;4.1485;3.772;3.7478;3.6532;3.5216;3.3938;3.3696 -;-;-;-;-;-;-;-;-;- 843 1 2.103 76857.7 0.9700000286102296 5783 3689 9472 DOHH2_400M_050219_1,9474 DOHH2_400M_050219_1,9474,FILWRHLEYY False False FLENVIRDAVTY 55.413402 720.380603015423 575670.5625 9472.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 8.59703540802002 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9476 55.43 800.0 192560.0 25 0 12860.0 + 11133 GEIDYEAIVKL 11 123 625.33742637182 1248.66029981044 2 625.3377563357353 MULTI CID FTMS 0 0 0 9475 117258.5078125 0.6980277496126199 -4 0.1073951721191406 1 Unmodified _GEIDYEAIVKL_ ENSG00000100519|ENST00000445930|PSMC6 73.1962812333195 0.0231417158388345 1 {[DA]|[EG]}{I|L}DYEA{I|L}VK{I|L} 11 0 + 92.8 0.0 0.0 7.432 7.432 84.904 0.0 0.0 0.0 17.20046687481944 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 2.004432191740108 1.5228787452803376 0.6643943297944485 0.3494850021680094 + + {[DA]|[EG]}{I|L}DYEA{I|L}VK{I|L};{[DA]|[EG]}{I|L}DYEA{I|L}V{I|L}K;{[DA]|[EG]}{I|L}DY{I|L}T[TP]K{I|L};{[DA]|[EG]}{I|L}DY{I|L}T[TP]{I|L}K;W{I|L}D[{I|L}P]{[YC]|[HE]}VK{I|L};W{I|L}D[{I|L}P]{[YC]|[HE]}V{I|L}K 7.432;7.1909;5.3476;5.1065;4.5162;4.2752 +;-;-;-;-;- + 3032 + 1 2.103 132559.8 0.4000000059604645 5784 3690 9475 DOHH2_400M_050219_1,9476 DOHH2_400M_050219_1,9476,GEIDYEAIVKL True True GEIDYEAIVKL 55.429781 625.337756335735 999097.4375 9475.0 ENSG00000100519|ENST00000445930|PSMC6 5.502831776936849 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9477 55.444 800.0 171990.0 25 0 31176.0 + 30717 RGGILIEL 8 89 435.7742069135034 869.5338608938068 2 435.7741882205009 MULTI CID FTMS 0 0 0 9475 109304.3828125 0.2311831494493262 -6 0.1350212097167968 2 Unmodified _RGGILIEL_ ENSG00000143457|ENST00000271732|GOLPH3L 28.486842064014134 0.4448922141344407 1 {I|L}{I|L}E{I|L} 4 4 36.983 0.0 0.0 4.2531 0.0 0.0 383.2281816334345 0.0 383.2281816334345 0.0 10.798122174395033 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {I|L}{I|L}E{I|L} 4.2531 + + 47 1 2.103 110021.6 0.4000000059604645 5785 3690 9475 DOHH2_400M_050219_1,9477 DOHH2_400M_050219_1,9477,RGGILIEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9478 55.457 800.0 136430.0 25 0 9829.7 + 2626 ASTPTLIEL 9 102 944.529847679248 943.522571212648 1 944.5304443240166 MULTI CID FTMS 0 0 0 9475 115168.7265625 0.8325446664912902 -5 0.1309852600097656 3 Unmodified _ASTPTLIEL_ ENSG00000172766|ENST00000379406|NAA16;nc|ENSG00000172766|Q6N069-2|NAA16;nc|ENSG00000172766|Q6N069-3|NAA16;nc|ENSG00000172766|Q6N069-4|NAA16 71.13359017698441 0.0206607516130725 1 [TP]{I|L}{I|L}A{[MG]|[TS]}E{I|L} 9 6 + 47.658 0.0 0.0 5.051 5.051 76.948 0.0 0.0 0.0 9.4341512294747 14.973024840566469 9.4341512294747 2.5262021874630847 0 0.3807196863200844 0.0 1.8778623208748888 0.0 [TP]{I|L}{I|L}A{[MG]|[TS]}E{I|L};[TP]{I|L}{I|L}AEST{I|L};[TP]{I|L}A{[MG]|[TS]}{I|L}E{I|L};[TP]{I|L}{I|L}TEGT{I|L};[TP]{I|L}{I|L}ETGT{I|L};[TP]{I|L}{I|L}T{[SA]|[TG]}E{I|L};[TP]{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{I|L};[TP]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}E{I|L};[TP]{I|L}{I|L}EAST{I|L};[TP]{I|L}T{[SA]|[TG]}{I|L}E{I|L} 5.051;4.7833;4.7802;4.6908;4.6301;4.6227;4.6161;4.5993;4.2942;4.2746 -;-;-;-;-;-;-;-;-;- 620 1 2.103 78027.2 0.4699999988079071 5786 3690 9475 DOHH2_400M_050219_1,9478 DOHH2_400M_050219_1,9478,ASTPTLIEL True True ASTPTLIEL 55.457446 944.530444324017 816456.9375 9475.0 nc|ENSG00000172766|Q6N069-4|NAA16;;ENSG00000172766|ENST00000379406|NAA16;;nc|ENSG00000172766|Q6N069-3|NAA16;;nc|ENSG00000172766|Q6N069-2|NAA16 4.730851491292317 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9479 55.471 800.0 44211.0 25 0 23471.0 + 20080 LIVWWISS 8 31 1003.5598953739676 1002.5526189073674 1 1003.560229480267 MULTI CID FTMS 0 0 0 9475 91235.6015625 0.4242831825097986 9 -0.2416458129882812 4 Unmodified _LIVWWISS_ REV__ENSG00000155760|ENST00000286201|FZD7;REV__ENSG00000157240|ENST00000287934|FZD1;REV__ENSG00000163251|ENST00000295417|FZD5;REV__ENSG00000174804|ENST00000531380|FZD4;REV__ENSG00000177283|ENST00000374694|FZD8;REV__ENSG00000180340|ENST00000315323|FZD2 2.577480529830294 0.808687252328423 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 33591.0 0.449999988079071 5787 3690 9475 DOHH2_400M_050219_1,9479 DOHH2_400M_050219_1,9479,LIVWWISS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9482 55.492 800.0 273230.0 25 0 155400.0 22512 LPVVSSRL 8 69 870.5406865123351 869.5334100457351 1 870.5427734255791 MULTI CID FTMS 0 0 0 9481 99771.90625 0.4023300531899141 -3 0.085662841796875 1 Unmodified _LPVVSSRL_ ENST00000513443.5_1_5:81268034-81268226:+|nuORF 7.910154910731844 0.7763180056447161 1 A 1 8 3.9794 0.0 0.0 0.45765 0.0 0.0 663.4281987193664 132.0458925836547 795.474091303021 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.45765 - 5 + 1 2.103 151823.0 0.4399999976158142 5788 3692 9481 DOHH2_400M_050219_1,9482 DOHH2_400M_050219_1,9482,LPVVSSRL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9483 55.506 800.0 29693.0 25 0 1734.6 -1 0 56 1086.8573837286335 3257.5503217861005 3 1087.856005847454 MULTI CID FTMS 0 0 0 9481 78231.5078125 1.0 0 0.0 2 1 M 1 -1 6.9897 0.0 0.0 0.21457 0.0 0.0 490.2424058638297 2633.2219942682245 3123.4644001320544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.21457 - 13 + 1 2.103 25261.2 0.4600000083446502 5789 3692 9481 DOHH2_400M_050219_1,9483 DOHH2_400M_050219_1,9483, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9486 55.524 706.0 153800.0 25 0 12669.0 + 30596 REVSVPTFSW 10 85 604.3089778985591 1206.603402863918 2 604.3083373904228 MULTI CID FTMS 0 0 0 9485 90458.5 0.5409902121071443 -3 0.0383758544921875 1 Unmodified _REVSVPTFSW_ ENSG00000134824|ENST00000278840|FADS2;nc|ENSG00000134824|O95864-3|FADS2 74.19965305603844 0.0188013450058842 1 {[WS]|[C(Carbamidomethyl (C)){I|L}]}VVV[TP]{M(Oxidation (M))|F}SW 10 3 + 65.705 0.0 0.0 5.4454 5.4454 75.408 0.0 0.0 0.0 0.3741755186911319 9.164539485499256 0.3741755186911319 0.3741755186911319 0 1.774227503252014 1.3010299956639813 1.1307196863200843 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}VVV[TP]{M(Oxidation (M))|F}SW;[TP]{M(Oxidation (M))|F}[KP][TP]{M(Oxidation (M))|F}SW;{[WS]|[C(Carbamidomethyl (C)){I|L}]}VVV{[VA]|[{I|L}G]}{M(Oxidation (M))|F}DW;[TP]{M(Oxidation (M))|F}[KP]{[VA]|[{I|L}G]}{M(Oxidation (M))|F}DW;{[WS]|[C(Carbamidomethyl (C)){I|L}]}VVV[TP]{M(Oxidation (M))|F}GDT;[TP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}[Y{I|L}]{M(Oxidation (M))|F}S[VS];{[WS]|[C(Carbamidomethyl (C)){I|L}]}VVT[VP]{M(Oxidation (M))|F}SW;{[WS]|[C(Carbamidomethyl (C)){I|L}]}VVV{[VA]|[{I|L}G]}MMW;{[VA]|[{I|L}G]}CVVV[TP]{M(Oxidation (M))|F}SW;[TP]{M(Oxidation (M))|F}SW[R{I|L}]D[VS] 5.4454;5.4144;4.2435;4.2125;4.1151;4.0958;3.9706;3.848;3.6927;3.3917 -;-;-;-;-;-;-;-;-;- 692 1 2.103 82049.5 1.0 5790 3694 9485 DOHH2_400M_050219_1,9486 DOHH2_400M_050219_1,9486,REVSVPTFSW True True REVSVPTFSW 55.524491 604.308337390423 896703.1875 9485.0 ENSG00000134824|ENST00000278840|FADS2;;nc|ENSG00000134824|O95864-3|FADS2 7.292308966318767 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9487 55.538 800.0 76855.0 25 0 15737.0 + -1 RIAKMKRRHFI 11 78 491.2993461396219 1470.8762090190658 3 491.2997619509697 MULTI CID FTMS 0 0 0 9485 89399.7578125 0.9394289492540177 3 -0.1066970825195312 2 Oxidation (M) _RIAKM(Oxidation (M))KRRHFI_ REV__ENSG00000205442|ENST00000543880|IZUMO3 0.5059551277355931 0.8727608062196215 1 {I|L} 1 -1 12.474 0.0 0.0 0.84808 0.0 0.0 1339.7814652219938 0.0 1339.7814652219938 0.0 10.255762612236904 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.84808 + + 40 + 1 2.103 60409.4 0.3600000143051147 5791 3694 9485 DOHH2_400M_050219_1,9487 DOHH2_400M_050219_1,9487,RIAKMKRRHFI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9488 55.552 800.0 38628.0 25 0 1474.1 -1 0 76 1187.5559930127044 0 1187.551074206829 PEAK CID FTMS 0 0 0 9485 85626.5546875 1.0 0 0.0 3 1 H 1 -1 3.9794 0.0 0.0 0.16769 0.0 0.0 1186.5318335822465 1046.4813936822875 2233.013227264534 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.16769 - 4 + 1 2.103 27674.8 0.4300000071525574 5792 3694 9485 DOHH2_400M_050219_1,9488 DOHH2_400M_050219_1,9488, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9490 55.559 128.0 722700.0 25 0 64161.0 + 7103 EEMEWFNNY 9 94 631.2449292070071 1260.475305480814 2 631.2454101443291 MULTI CID FTMS 0 0 0 9489 361797.15625 0.5127434416721407 4 -0.1028785705566406 1 Unmodified _EEMEWFNNY_ ENSG00000101003|ENST00000262460|GINS1 85.35673624503755 0.0162188719545379 1 EEMEW{M(Oxidation (M))|F} 6 3 40.193 0.0 0.0 3.1887 0.0 0.0 0.0 406.14001430333286 406.14001430333286 18.2681191528873 0.0 0.0 0.0 0 0.2396518287104437 1.154901959985743 1.6861818737241734 0.0 + EEMEW{M(Oxidation (M))|F} 3.1887 + + 466 1 2.103 72395.7 1.0 5793 3695 9489 DOHH2_400M_050219_1,9490 DOHH2_400M_050219_1,9490,EEMEWFNNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9491 55.573 800.0 226140.0 25 0 33576.0 + 5213 DIWKKFEL 8 132 539.8000708618631 1077.585588790526 2 539.8004638552666 MULTI CID FTMS 0 0 0 9489 99859.1875 0.0334354510742222 -11 0.2737884521484375 2 Unmodified _DIWKKFEL_ ENSG00000116990|ENST00000372816|MYCL;ENSG00000134323|ENST00000281043|MYCN;ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000116990|P12524-2|MYCL;nc|ENSG00000116990|P12524-3|MYCL;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC;nc|ENSG00000204053|P12525|MYCLP1 63.960520009940105 0.1161527639280749 1 {I|L}D{I|L}{M(Oxidation (M))|F}GK{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L} 9 5 + 86.763 0.0 0.0 8.0516 8.0516 89.767 0.0 0.0 0.0 47.03447425662482 8.524459091530403 8.524459091530403 6.817496819840656 0 0.805462187404089 2.0 1.586696871556164 0.4247425010840047 {I|L}D{I|L}{M(Oxidation (M))|F}GK{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};D{I|L}{I|L}{M(Oxidation (M))|F}GK{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};{I|L}D{I|L}{M(Oxidation (M))|F}WK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};D{I|L}{I|L}{M(Oxidation (M))|F}WK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}VEGK{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};[WK]K{M(Oxidation (M))|F}EVE{I|L};[WK]K{M(Oxidation (M))|F}E{I|L}D{I|L};[WK]KE{M(Oxidation (M))|F}VE{I|L};KKW{M(Oxidation (M))|F}EVE{I|L};[WK]KE{M(Oxidation (M))|F}{I|L}D{I|L} 8.0516;7.4189;7.0971;6.4644;5.2386;5.1594;4.9735;4.5107;4.3261;4.3249 -;-;-;-;-;-;-;-;-;- 1391 + 1 2.103 138899.2 0.3700000047683716 5794 3695 9489 DOHH2_400M_050219_1,9491 DOHH2_400M_050219_1,9491,DIWKKFEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9492 55.583 625.0 27311.0 25 0 1033.6 -1 0 49 976.9770775526642 0 976.9773437380792 PEAK CID FTMS 0 0 0 9489 70409.9921875 1.0 0 0.0 3 1 {I|L} 1 -1 3.9794 0.0 0.0 0.20387 0.0 0.0 1353.579446998103 482.2514132135376 1835.8308602116408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.20387 - 1 + 1 2.103 19038.6 1.0 5795 3695 9489 DOHH2_400M_050219_1,9492 DOHH2_400M_050219_1,9492, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9494 55.588 44.0 1665100.0 25 0 313130.0 + 35693 SVFPRAVAL 9 61 480.2873554689923 958.5601580047846 2 480.2874328494072 MULTI CID FTMS 0 0 0 9493 1201025.625 0.6176021734401764 -8 0.1978187561035156 1 Unmodified _SVFPRAVAL_ REV__ENSG00000213903|ENST00000345363|LTB4R 42.09456458481378 0.0639583784996157 1 [VS]{M(Oxidation (M))|F}PRRP 7 -1 43.746 0.0 0.0 4.5637 0.0 0.0 0.0 116.05106531314686 116.05106531314686 24.07985393754174 0.0 0.0 0.0 0 0.75 2.0 0.0 1.1307196863200843 [VS]{M(Oxidation (M))|F}PRRP 4.5637 - 69 + 1 2.103 61221.1 1.0 5796 3696 9493 DOHH2_400M_050219_1,9494 DOHH2_400M_050219_1,9494,SVFPRAVAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9495 55.603 800.0 89032.0 25 0 11881.0 + 10423 FTDESYLELY 10 102 640.2899560317362 1278.5653591302723 2 640.2905151247978 MULTI CID FTMS 0 0 0 9493 93356.203125 0.9346335009369336 -4 0.1080894470214843 2 Unmodified _FTDESYLELY_ ENSG00000171824|ENST00000376936|EXOSC10;ENST00000485606.1_1_1:11140819-11141291:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10 43.85829265575387 0.1168243637355526 1 {[QN]|[E{I|L}]|[KN]}YS[EC]{I|L}{M(Oxidation (M))|F}{I|L}Y 10 7 + 53.778 0.0 0.0 4.2061 4.2061 77.903 0.0 0.0 0.0 10.69599075987611 10.69599075987611 10.69599075987611 6.180993120779945 0 0.8935078169319297 1.5228787452803376 1.1989700043360187 0.0 {[QN]|[E{I|L}]|[KN]}YS[EC]{I|L}{M(Oxidation (M))|F}{I|L}Y;{[QN]|[E{I|L}]|[KN]}[EC]SY{I|L}{M(Oxidation (M))|F}{I|L}Y;{[QN]|[E{I|L}]|[KN]}YSD{[ET]|[MV]}{M(Oxidation (M))|F}{I|L}Y;{[QN]|[E{I|L}]|[KN]}[MT]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{M(Oxidation (M))|F}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}YN{[YC]|[HE]}Y;{[QN]|[E{I|L}]|[KN]}[MT]{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Y;[{I|L}T]ME{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{M(Oxidation (M))|F}{I|L}Y;[{M(Oxidation (M))|F}T]DESY{[QN]|[E{I|L}]|[KN]}{I|L}Y;[Y{I|L}]SED{[ET]|[MV]}{M(Oxidation (M))|F}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{M(Oxidation (M))|F}SY{[QN]|[E{I|L}]|[KN]}{I|L}Y 4.2061;3.7227;3.5596;3.5257;3.3696;3.2524;3.0339;2.9912;2.9775;2.8173 -;-;-;-;-;-;-;+;-;- + 1233 1 2.103 61004.8 0.8899999856948853 5797 3696 9493 DOHH2_400M_050219_1,9495 DOHH2_400M_050219_1,9495,FTDESYLELY True True FTDESYLELY 55.602516 640.290515124798 598194.4375 9493.0 ENSG00000171824|ENST00000376936|EXOSC10;;ENST00000485606.1_1_1:11140819-11141291:-|nuORF;;nc|ENSG00000171824|Q01780-2|EXOSC10 6.962759812672933 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9496 55.616 800.0 86451.0 25 0 5205.1 + 40651 VLDSFLQGY 9 96 1041.525891511735 1040.518615045135 1 1041.522509753704 MULTI CID FTMS 0 0 0 9493 94198.015625 0.1494073591415398 6 -0.1146087646484375 3 Unmodified _VLDSFLQGY_ ENSG00000186185|ENST00000593135|KIF18B;nc|ENSG00000186185|Q86Y91-6|KIF18B 111.28704002717404 0.0050101734347035 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}V{I|L}QGY 9 4 + 94.218 0.0 0.0 9.0549 9.0549 91.929 0.0 0.0 0.0 5.642492736872597 52.49204916223157 5.642492736872597 8.464015683995783 0 1.610924374808178 0.0 2.024227503252014 0.3252574989159953 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}V{I|L}QGY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}DV{I|L}QGY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DV{I|L}{I|L}QGY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}{I|L}VQGY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}VQ{I|L}GY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SDV{I|L}QGY;[{I|L}V]DS{M(Oxidation (M))|F}{I|L}QGY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}V{I|L}[AG]GY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VEV{I|L}QGY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VD{I|L}QGY 9.0549;8.2415;8.1501;8.0148;8.0012;7.9522;7.9237;7.8574;7.7813;7.5673 -;-;-;-;-;-;+;-;-;- + 2975 1 2.103 49905.9 0.4600000083446502 5798 3696 9493 DOHH2_400M_050219_1,9496 DOHH2_400M_050219_1,9496,VLDSFLQGY True True VLDSFLQGY 55.61638 1041.5225097537 4439918.8125 9493.0 ENSG00000186185|ENST00000593135|KIF18B;;nc|ENSG00000186185|Q86Y91-6|KIF18B 6.774251937866211 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9498 55.633 800.0 100800.0 25 0 12196.0 + 23796 LVDPWTPHLY 10 86 620.8217342591471 1239.628915585094 2 620.8216430544853 MULTI CID FTMS 0 0 0 9497 51531.30078125 0.2667182135364293 6 -0.0856056213378906 1 Unmodified _LVDPWTPHLY_ ENSG00000010292|ENST00000315579|NCAPD2 74.42276476219924 0.0187941584752634 1 [{I|L}V]DPWTPH{I|L}Y 10 0 + 88.281 0.0 0.0 7.1216 7.1216 95.882 0.0 0.0 0.0 60.15948861577321 10.668563304579024 10.668563304579024 39.46462401513724 0 0.8807196863200843 2.0 1.1549471895720984 0.0 + + [{I|L}V]DPWTPH{I|L}Y;[{I|L}V]D[QA]{[QG]|[NA]}PH{I|L}Y;[{I|L}V]{[ET]|[MV]}W{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}Y;[{I|L}V]{[ET]|[MV]}WT{[QV]|[N{I|L}]|[RA]|[KV]}[HQ];[{I|L}V]{[ET]|[MV]}W{[VA]|[{I|L}G]}GT[HQ];[{I|L}V]{[ET]|[MV]}W{[QV]|[N{I|L}]|[RA]|[KV]}T[HQ];[{I|L}V]{[ET]|[MV]}WT[Y{I|L}]{[ES]|[DT]|[{I|L}C]} 7.1216;3.938;1.9915;1.5456;1.4951;1.3495;1.1238 +;-;-;-;-;-;- + 440 + 1 2.103 65200.3 0.3799999952316284 5799 3697 9497 DOHH2_400M_050219_1,9498 DOHH2_400M_050219_1,9498,LVDPWTPHLY True True LVDPWTPHLY 55.632759 620.821643054485 2761288.5 9497.0 ENSG00000010292|ENST00000315579|NCAPD2 9.999804814656576 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9499 55.637 232.0 790870.0 25 0 467760.0 22812 LRDKLPFA 8 45 959.5686697251888 958.5613932585889 1 959.5687744021416 MULTI CID FTMS 0 0 0 9497 307332.84375 0.7764470731683054 -7 0.2029762268066406 2 Unmodified _LRDKLPFA_ ENST00000450295.5_3_9:91992741-91993038:-|nuORF 10.823927491677226 0.7510103885582552 1 [HV]{I|L}Q 4 7 7.5359 0.0 0.0 0.78617 0.0 0.0 0.0 478.2684604795451 478.2684604795451 2.0513687187288108 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [HV]{I|L}Q 0.78617 - 23 1 2.103 127194.3 1.0 5800 3697 9497 DOHH2_400M_050219_1,9499 DOHH2_400M_050219_1,9499,LRDKLPFA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9500 55.651 800.0 146030.0 25 0 15218.0 + 5215 DIWKKFEL 8 133 360.2026503882872 1077.5861217650615 3 360.2019225955009 MULTI CID FTMS 0 0 0 9497 79725.5546875 0.3022648796766196 -5 0.1410140991210937 3 Unmodified _DIWKKFEL_ ENSG00000116990|ENST00000372816|MYCL;ENSG00000134323|ENST00000281043|MYCN;ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000116990|P12524-2|MYCL;nc|ENSG00000116990|P12524-3|MYCL;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC;nc|ENSG00000204053|P12525|MYCLP1 42.09456458481378 0.1992492688217789 1 {NN|[MP]|[D{I|L}]|[EV]}WK 4 4 43.188 0.0 0.0 4.0078 0.0 0.0 0.0 532.2783986733102 532.2783986733102 29.47621246364342 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.4247425010840047 + {NN|[MP]|[D{I|L}]|[EV]}WK 4.0078 + + 151 + 1 2.103 94256.6 0.8700000047683716 5801 3697 9497 DOHH2_400M_050219_1,9500 DOHH2_400M_050219_1,9500,DIWKKFEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9503 55.667 506.0 66583.0 25 0 20209.0 -1 0 48 560.0043787525492 1676.9913068578476 3 560.0041992068291 MULTI CID FTMS 0 0 0 9502 52892.1640625 0.6538635159024252 -2 0.0386695861816406 1 1 Y 1 -1 13.495 0.0 0.0 0.80471 0.0 0.0 1495.9165673332366 0.0 1495.9165673332366 0.0 11.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.80471 - 7 + 1 2.103 34615.8 1.0 5802 3699 9502 DOHH2_400M_050219_1,9503 DOHH2_400M_050219_1,9503, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9504 55.674 388.0 245030.0 25 0 10208.0 + 1832 ALTPVVVTL 9 94 912.576788404504 911.569511937904 1 914.5828735232352 MULTI CID FTMS 0 0 0 9502 241115.609375 1.0 0 0.0 2 Unmodified _ALTPVVVTL_ ENSG00000135446|ENST00000257904|CDK4;nc|ENSG00000135446|P11802-2|CDK4 39.957323273325 0.0756908302845263 1 [VP][KA]SVVT 8 6 48.179 0.0 0.0 5.2853 0.0 0.0 0.0 127.06655718620392 127.06655718620392 24.88047773009351 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.086696871556164 0.8807196863200843 [VP][KA]SVVT 5.2853 - 1044 1 2.103 67485.1 1.0 5803 3699 9502 DOHH2_400M_050219_1,9504 DOHH2_400M_050219_1,9504,ALTPVVVTL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9507 55.684 218.0 302500.0 25 0 52216.0 + 30718 RGGILIEL 8 74 435.7742069135034 869.5338608938068 2 435.7739135622978 MULTI CID FTMS 0 0 0 9506 234197.21875 0.4953365018836745 5 -0.0554389953613281 1 Unmodified _RGGILIEL_ ENSG00000143457|ENST00000271732|GOLPH3L 28.486842064014134 0.4448922141344407 1 {I|L}{I|L}E{I|L} 4 4 39.993 0.0 0.0 4.5993 0.0 0.0 383.2274647443375 0.0 383.2274647443375 0.0 29.023722004121453 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {I|L}{I|L}E{I|L} 4.5993 + + 48 1 2.103 61423.2 1.0 5804 3701 9506 DOHH2_400M_050219_1,9507 DOHH2_400M_050219_1,9507,RGGILIEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9508 55.698 800.0 26735.0 25 0 883.91 -1 0 59 1169.122485339642 0 1169.122485339642 PEAK CID FTMS 0 0 0 -1 0 2 1 C 1 -1 6.9897 0.0 0.0 0.29919 0.0 0.0 1113.9781727283091 1116.1974581354127 2230.175630863722 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.29919 - 7 + 1 2.103 24619.5 0.4699999988079071 5805 3701 9506 DOHH2_400M_050219_1,9508 DOHH2_400M_050219_1,9508, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9512 55.722 800.0 133330.0 25 0 12729.0 + 6918 EEFNREMFW 9 89 644.2766420441095 1286.538731155019 2 644.2773925662041 MULTI CID FTMS 0 0 0 9511 59490.83984375 0.5355614154108176 1 -0.0230445861816406 1 Unmodified _EEFNREMFW_ ENSG00000166946|ENST00000300213|CCNDBP1;ENST00000564630.5_1_15:43477651-43478217:+|nuORF;ENST00000566833.1_1_15:43477651-43481519:+|nuORF;nc|ENSG00000166946|O95273-2|CCNDBP1 70.33199760932243 0.0209706178985989 1 MT[RH]C(Carbamidomethyl (C))M{M(Oxidation (M))|F}W 8 5 46.004 0.0 0.0 3.5758 0.0 0.0 119.07393843818517 0.0 119.07393843818517 0.0 16.27423925516944 0.0 0.0 0 0.7742275032520141 0.0 1.4896518287104437 0.0 MT[RH]C(Carbamidomethyl (C))M{M(Oxidation (M))|F}W 3.5758 - 500 1 2.103 83212.5 0.4900000095367431 5806 3704 9511 DOHH2_400M_050219_1,9512 DOHH2_400M_050219_1,9512,EEFNREMFW True True EEFNREMFW 55.722294 644.277392566204 417945.0625 9511.0 nc|ENSG00000166946|O95273-2|CCNDBP1;;ENST00000564630.5_1_15:43477651-43478217:+|nuORF;;ENST00000566833.1_1_15:43477651-43481519:+|nuORF;;ENSG00000166946|ENST00000300213|CCNDBP1 10.035826365152994 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9513 55.729 368.0 72594.0 25 0 8764.7 -1 0 36 1092.525471940807 0 1092.528369128704 PEAK CID FTMS 0 0 0 9511 86724.6796875 1.0 0 0.0 2 1 P[PA]PPPPP 8 -1 35.878 0.0 0.0 1.6435 0.0 0.0 1075.467559352044 354.14228235416255 1429.6098417062065 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 P[PA]PPPPP 1.6435 - 92 + 1 2.103 26922.2 1.0 5807 3704 9511 DOHH2_400M_050219_1,9513 DOHH2_400M_050219_1,9513, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9516 55.749 800.0 179440.0 25 0 22852.0 + 11507 GILSPSIVL 9 117 898.5610249657493 897.5537484991493 1 898.5617553591728 MULTI CID FTMS 0 0 0 9515 95638.03125 0.6224048643464297 -1 0.0040206909179687 1 Unmodified _GILSPSIVL_ ENSG00000168918|ENST00000445964|INPP5D;nc|ENSG00000168918|Q92835-2|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D 77.98433622928108 0.0180125044636492 1 [PS]S{I|L}VA{I|L}V{I|L} 9 6 + 78.452 0.0 0.0 8.7407 8.7407 89.446 0.0 0.0 0.0 5.642492736872597 47.27909090549994 5.642492736872597 5.76606256887672 0 0.3252574989159953 0.0 2.5356668758921828 0.0 [PS]S{I|L}VA{I|L}V{I|L};[PS]S{I|L}V{I|L}AV{I|L};[PS]{I|L}SVA{I|L}V{I|L};{[VA]|[{I|L}G]}[DV]VA{I|L}V{I|L};[PS]S{I|L}AV{I|L}V{I|L};[PS]S{I|L}{I|L}G{I|L}V{I|L};[PS]S{I|L}VAV{I|L}{I|L};{[TV]|[{I|L}S]}PSVA{I|L}V{I|L};[PS]{I|L}SV{I|L}AV{I|L};{[VA]|[{I|L}G]}[DV]V{I|L}AV{I|L} 8.7407;8.0983;7.9364;7.8903;7.7557;7.6314;7.605;7.4931;7.294;7.2479 -;-;-;-;-;-;-;-;-;- 1074 1 2.103 95734.0 0.5199999809265137 5808 3706 9515 DOHH2_400M_050219_1,9516 DOHH2_400M_050219_1,9516,GILSPSIVL True False AVIPSSIVL 55.749367 898.561755359173 1010188.875 9515.0 ENSG00000185019|ENST00000217173|UBOX5;;nc|ENSG00000185019|O94941-2|UBOX5;;ENST00000217173.6_1_20:3102175-3102238:-|nuORF 4.167668263117473 1.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9517 55.755 324.0 166720.0 25 0 15667.0 + 43318 WLEEGIHWQY 10 76 680.8199462654559 1359.6253395977117 2 680.8199340701103 MULTI CID FTMS 0 0 0 9515 87595.65625 0.5073534329369106 -5 0.0554389953613281 2 Unmodified _WLEEGIHWQY_ ENSG00000158615|ENST00000367188|PPP1R15B 41.95555342248728 0.1369168616057562 1 W{I|L}EE{[VA]|[{I|L}G]}HQWY 10 2 + 77.541 0.0 0.0 5.7031 5.7031 82.091 0.0 0.0 0.0 43.66537568150207 6.025684359364405 6.025684359364405 4.771212547196626 0 1.809894379144197 2.0 0.4247425010840047 0.0 W{I|L}EE{[VA]|[{I|L}G]}HQWY;W{I|L}E[TP]THQWY;W{I|L}EHAEVQWY;W{I|L}EE[HA]VQWY;W{I|L}[QA]QTHQWY;W{I|L}EHAE[R{M(Oxidation (M))|F}]{[WS]|[C(Carbamidomethyl (C)){I|L}]};W{I|L}EE[HA][R{M(Oxidation (M))|F}]{[WS]|[C(Carbamidomethyl (C)){I|L}]};W{I|L}E[TP]WQQ{[WS]|[C(Carbamidomethyl (C)){I|L}]};[W{I|L}]E[YN]PEE{I|L}[PA];W{I|L}EHAEG{[YC]|[HE]}[RP] 5.7031;5.3522;5.2926;5.2603;4.8507;3.9718;3.9394;3.8099;3.7827;3.4756 -;-;-;-;-;-;-;-;-;- 2291 + 1 2.103 44940.3 1.0 5809 3706 9515 DOHH2_400M_050219_1,9517 DOHH2_400M_050219_1,9517,WLEEGIHWQY False True WLEEGIHWQY 55.755269 680.81993407011 981849.875 9515.0 ENSG00000158615|ENST00000367188|PPP1R15B 8.543863932291666 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9518 55.769 800.0 38974.0 25 0 1850.5 -1 0 63 1186.7560638934012 0 1186.756152331829 PEAK CID FTMS 0 0 0 9515 53757.421875 1.0 0 0.0 3 1 C 1 -1 3.0989 0.0 0.0 0.13067 0.0 0.0 1293.90853784364 971.5539644830686 2265.4625023267085 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.13067 - 5 + 1 2.103 26557.7 0.4199999868869781 5810 3706 9515 DOHH2_400M_050219_1,9518 DOHH2_400M_050219_1,9518, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9521 55.787 625.0 51241.0 25 0 861.33 -1 0 69 953.2168827709716 6665.467244130601 7 953.583544909954 MULTI CID FTMS 0 0 0 -1 0 1 1 AT 2 -1 10.969 0.0 0.0 0.16457 0.0 0.0 6253.310397062045 237.0515078180297 6490.361904880075 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AT 0.16457 - 8 + 1 2.103 27524.3 1.0 5811 3708 9520 DOHH2_400M_050219_1,9521 DOHH2_400M_050219_1,9521, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9524 55.803 582.0 256570.0 25 0 43254.0 + 45399 YTAVVPLVY 9 98 1024.5720916114833 1023.5648151448833 1 1024.571459949017 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 97.07464715276576 0.0121042244793311 1 [{I|L}P]VYTAVVY 9 6 + 85.16 0.0 0.0 8.32 8.32 94.482 0.0 0.0 0.0 12.26280941356464 16.478174818886373 12.26280941356464 10.48455006504028 0 0.805462187404089 1.6989700043360187 1.5044321917401078 0.0 [{I|L}P]VYTAVVY;[{I|L}P]VYTG{I|L}VY;[TA]YVVP{I|L}VY;[YT]AVVP{I|L}VY;[TA]VYVP{I|L}VY;{[VA]|[{I|L}G]}TYVP{I|L}VY;[YV]TAVP{I|L}VY;[TA]YVP{I|L}VVY;[YT]VAVP{I|L}VY;[YT]AVP{I|L}VVY 8.32;7.2957;7.1219;6.9792;6.9569;6.8795;6.6323;6.593;6.4895;6.4502 -;-;-;+;-;-;-;-;-;- + 2280 1 2.103 103034.4 1.0 5812 3710 9523 DOHH2_400M_050219_1,9524 DOHH2_400M_050219_1,9524,YTAVVPLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9525 55.815 704.0 52619.0 25 0 5259.3 -1 0 70 1081.197733783573 0 1081.198657214642 PEAK CID FTMS 0 0 0 9523 79907.484375 1.0 0 0.0 2 1 C(Carbamidomethyl (C)) 1 -1 0.71334 0.0 0.0 0.033019 0.0 0.0 1050.8785475458587 946.4629000299436 1997.3414475758025 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.033019 - 3 + 1 2.103 30346.2 1.0 5813 3710 9523 DOHH2_400M_050219_1,9525 DOHH2_400M_050219_1,9525, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9527 55.82 25.0 3077100.0 25 0 522860.0 + 5214 DIWKKFEL 8 86 539.8000708618631 1077.585588790526 2 539.8005248904228 MULTI CID FTMS 0 0 0 9526 2047418.125 0.6855287957045844 5 -0.1039352416992187 1 Unmodified _DIWKKFEL_ ENSG00000116990|ENST00000372816|MYCL;ENSG00000134323|ENST00000281043|MYCN;ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000116990|P12524-2|MYCL;nc|ENSG00000116990|P12524-3|MYCL;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC;nc|ENSG00000204053|P12525|MYCLP1 51.629811660486645 0.1315812959312577 1 {I|L}D{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}KW 7 6 64.557 0.0 0.0 5.9909 0.0 0.0 0.0 125.07254968814688 125.07254968814688 44.86448853222001 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}D{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}KW 5.9909 - 287 + 1 2.103 66937.5 1.0 5814 3711 9526 DOHH2_400M_050219_1,9527 DOHH2_400M_050219_1,9527,DIWKKFEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9528 55.834 800.0 225180.0 25 0 53277.0 + 5216 DIWKKFEL 8 88 1078.593649205519 1077.586372738919 1 1078.591479480267 MULTI CID FTMS 0 0 0 9526 135093.28125 0.7156937042161591 8 -0.1283035278320312 2 Unmodified _DIWKKFEL_ ENSG00000116990|ENST00000372816|MYCL;ENSG00000134323|ENST00000281043|MYCN;ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000116990|P12524-2|MYCL;nc|ENSG00000116990|P12524-3|MYCL;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC;nc|ENSG00000204053|P12525|MYCLP1 59.36838082759317 0.115075853891744 1 {NN|[MP]|[D{I|L}]|[EV]}WKK{M(Oxidation (M))|F}E{I|L} 8 0 + 70.17 0.0 0.0 6.5118 6.5118 86.979 0.0 0.0 0.0 13.226825097560422 47.14964095499696 13.226825097560422 7.257724967479859 0 1.3494850021680094 0.0 1.1549471895720984 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}WKK{M(Oxidation (M))|F}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}WKKE{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}WKK{M(Oxidation (M))|F}NK;[WK]{NN|[MP]|[D{I|L}]|[EV]}K{M(Oxidation (M))|F}E{I|L};[WK]K{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L};KK{M(Oxidation (M))|F}EWVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}WKK{M(Oxidation (M))|F}GGK;[WK]{NN|[MP]|[D{I|L}]|[EV]}KE{M(Oxidation (M))|F}{I|L};KKW{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L};[WK]K{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}{I|L} 6.5118;5.8383;5.157;4.8954;4.4314;4.329;4.2975;4.2219;4.0781;3.7579 +;-;-;-;-;-;-;-;-;- + 513 1 2.103 121926.2 0.5600000023841858 5815 3711 9526 DOHH2_400M_050219_1,9528 DOHH2_400M_050219_1,9528,DIWKKFEL True True DIWKKFEL 55.834448 1078.59147948027 32118358.625 9526.0 nc|ENSG00000204053|P12525|MYCLP1;;nc|ENSG00000136997|P01106-1|MYC;;ENSG00000136997|ENST00000621592|MYC;;nc|ENSG00000136997|P01106-3|MYC;;ENSG00000116990|ENST00000372816|MYCL;;ENSG00000134323|ENST00000281043|MYCN;;nc|ENSG00000116990|P12524-2|MYCL;;nc|ENSG00000116990|P12524-3|MYCL 5.611560185750325 1.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9529 55.848 800.0 131090.0 25 0 5668.3 -1 0 118 942.4496870938466 1882.884821254493 2 942.9514037966728 MULTI CID FTMS 0 0 0 9526 91482.828125 0.7068236618382531 -1 0.0249977111816406 3 1 [YQ][HS]EAQQNA{M(Oxidation (M))|F}YQV 14 -1 84.479 0.0 0.0 4.4867 0.0 0.0 0.0 186.11442249060732 186.11442249060732 60.508979508897056 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 1.035666875892183 [YQ][HS]EAQQNA{M(Oxidation (M))|F}YQV 4.4867 - 1973 1 2.103 74009.6 0.4199999868869781 5816 3711 9526 DOHH2_400M_050219_1,9529 DOHH2_400M_050219_1,9529, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9530 55.862 800.0 50710.0 25 0 2651.7 -1 0 85 1137.7816583890751 3410.3231457674265 3 1138.392993152142 MULTI CID FTMS 0 0 0 -1 0 4 1 YSD{I|L}V{I|L} 6 -1 22.115 0.0 0.0 0.64849 0.0 0.0 2289.8234642262137 427.1262301080688 2716.9496943342824 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YSD{I|L}V{I|L} 0.64849 - 105 + 1 2.103 34933.4 0.4300000071525574 5817 3711 9526 DOHH2_400M_050219_1,9530 DOHH2_400M_050219_1,9530, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9532 55.867 50.0 1392900.0 25 0 265350.0 + 36183 SVVRAFAPL 9 60 480.2873554689923 958.5601580047846 2 480.2872497439384 MULTI CID FTMS 0 0 0 9531 846418.875 0.4352531086426978 8 -0.0853271484375 1 Unmodified _SVVRAFAPL_ REV__ENSG00000183878|ENST00000545955|UTY;REV__nc|ENSG00000183878|O14607-3|UTY;REV__nc|ENSG00000183878|O14607-4|UTY;REV__nc|ENSG00000183878|O14607-5|UTY;REV__nc|ENSG00000183878|O14607|UTY 32.30548876998284 0.1201446275138228 1 [VS]{M(Oxidation (M))|F}{I|L} 4 -1 40.445 0.0 0.0 4.2194 0.0 0.0 0.0 509.2828468960077 509.2828468960077 28.662575976154923 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [VS]{M(Oxidation (M))|F}{I|L} 4.2194 - 39 + 1 2.103 60347.4 1.0 5818 3712 9531 DOHH2_400M_050219_1,9532 DOHH2_400M_050219_1,9532,SVVRAFAPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9533 55.881 800.0 186740.0 25 0 26351.0 + 38571 TTDDWKDFLY 10 125 652.2957740697104 1302.5769952062208 2 652.2954589724541 MULTI CID FTMS 0 0 0 9531 91018.703125 0.1301908289395507 -13 0.207122802734375 2 Unmodified _TTDDWKDFLY_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 97.74103586103692 0.0087788759135915 1 {[DS]|[MA]|[CV]|TT}DDWKD{M(Oxidation (M))|F}{I|L}Y 10 0 + 82.028 0.0 0.0 6.2974 6.2974 88.408 0.0 0.0 0.0 6.874081049124499 43.49968627112309 6.874081049124499 9.164539485499262 0 2.610924374808178 0.0 2.061604235276773 0.0 + + {[DS]|[MA]|[CV]|TT}DDWKD{M(Oxidation (M))|F}{I|L}Y;{[DS]|[MA]|[CV]|TT}DDWAAT{M(Oxidation (M))|F}{I|L}Y;[WM]DWKD{M(Oxidation (M))|F}{I|L}Y;{[ES]|[DT]|[{I|L}C]}TDWKD{M(Oxidation (M))|F}{I|L}Y;{[MG]|[TS]}EDWKD{M(Oxidation (M))|F}{I|L}Y;[VG]SWDDTT{M(Oxidation (M))|F}{I|L}Y;{[DS]|[MA]|[CV]|TT}DDWKD{I|L}{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}DTWKD{M(Oxidation (M))|F}{I|L}Y;[VG]SWDD{M(Oxidation (M))|F}TT{I|L}Y;{[DS]|[MA]|[CV]|TT}DDWAA{M(Oxidation (M))|F}T{I|L}Y 6.2974;5.5938;5.3813;5.3755;5.1738;5.1601;5.0509;4.9501;4.836;4.8075 +;-;-;-;-;-;-;-;-;- + 10082 1 2.103 113147.6 0.3600000143051147 5819 3712 9531 DOHH2_400M_050219_1,9533 DOHH2_400M_050219_1,9533,TTDDWKDFLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9536 55.902 800.0 35624.0 25 0 2834.0 -1 0 66 1110.880419909954 0 1110.880419909954 PEAK CID FTMS 0 0 0 -1 0 1 1 C 1 -1 4.6041 0.0 0.0 0.20742 0.0 0.0 1951.4814075915888 162.22817407779533 2113.709581669385 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.20742 - 3 + 1 2.103 27845.7 0.5899999737739563 5820 3714 9535 DOHH2_400M_050219_1,9536 DOHH2_400M_050219_1,9536, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9537 55.915 800.0 94089.0 25 0 8433.0 15906 ISTFRNIEV 9 121 360.2026503882872 1077.5861217650615 3 360.2020751833916 MULTI CID FTMS 0 0 0 9535 97982.4609375 0.3714826053174648 12 -0.1769599914550781 2 Unmodified _ISTFRNIEV_ ENST00000520482.1_1_8:142168222-142185717:+|nuORF 10.823927491677226 0.5436922275383211 1 {NN|[MP]|[D{I|L}]|[EV]}WK 4 8 38.258 0.0 0.0 3.5503 0.0 0.0 0.0 532.2782076471311 532.2782076471311 26.998599570275736 0.0 0.0 0.0 0 0.2059771852360797 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}WK 3.5503 - 71 + 1 2.103 62567.5 0.4600000083446502 5821 3714 9535 DOHH2_400M_050219_1,9537 DOHH2_400M_050219_1,9537,ISTFRNIEV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9540 55.936 800.0 172850.0 25 0 16323.0 + 2622 ASSPGILVL 9 98 856.5140914057403 855.5068149391402 1 856.5140258669853 MULTI CID FTMS 0 0 0 9539 104606.3203125 0.5564535031495607 6 -0.0786895751953125 1 Unmodified _ASSPGILVL_ ENSG00000102606|ENST00000646102|ARHGEF7;ENST00000483189.1_1_13:111893629-111928079:+|nuORF;nc|ENSG00000102606|Q14155-1|ARHGEF7;nc|ENSG00000102606|Q14155-2|ARHGEF7;nc|ENSG00000102606|Q14155-3|ARHGEF7;nc|ENSG00000102606|Q14155-5|ARHGEF7;nc|ENSG00000102606|Q14155-6|ARHGEF7;nc|ENSG00000102606|Q14155|ARHGEF7 50.855029805455786 0.0384952370514206 1 [{I|L}V]N{[DA]|[EG]}{I|L}V{I|L} 8 5 + 39.971 0.0 0.0 4.6722 4.6722 84.018 0.0 0.0 0.0 2.218487496163561 20.5854562117252 2.218487496163561 9.262137858390812 0 0.3494850021680094 0.0 1.1861818737241734 0.0 [{I|L}V]N{[DA]|[EG]}{I|L}V{I|L};[{I|L}V]GG{[DA]|[EG]}{I|L}V{I|L};[{I|L}V][PA]VSSA{I|L};[{I|L}V][PA]S{[SA]|[TG]}V{I|L};[{I|L}V][PA]VSAS{I|L};[{I|L}V][PA]SVSA{I|L};[{I|L}V][PA]SVAS{I|L};[{I|L}V][PA]A{[CA]|SS}V{I|L};[{I|L}V][PA]VASS{I|L};[{I|L}V][PA]AVSS{I|L} 4.6722;3.5895;3.4621;3.4367;3.2265;3.1966;2.961;2.9387;2.8096;2.0461 -;-;-;-;-;-;-;-;-;- 362 1 2.103 96705.3 0.6700000166893005 5822 3716 9539 DOHH2_400M_050219_1,9540 DOHH2_400M_050219_1,9540,ASSPGILVL True True ASSPGILVL 55.93566 856.514025866985 1094813.0 9539.0 nc|ENSG00000102606|Q14155-2|ARHGEF7;;nc|ENSG00000102606|Q14155-6|ARHGEF7;;ENST00000483189.1_1_13:111893629-111928079:+|nuORF;;nc|ENSG00000102606|Q14155-1|ARHGEF7;;nc|ENSG00000102606|Q14155-5|ARHGEF7;;nc|ENSG00000102606|Q14155|ARHGEF7;;nc|ENSG00000102606|Q14155-3|ARHGEF7;;ENSG00000102606|ENST00000646102|ARHGEF7 5.938902537027995 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9545 55.963 737.0 173460.0 25 0 11111.0 + 23790 LVDEWLDSY 9 141 570.2664563655526 1138.518359797905 2 570.2679321169853 MULTI CID FTMS 0 0 0 9544 72637.03125 0.8381858050024444 1 -0.0291862487792968 1 Unmodified _LVDEWLDSY_ ENSG00000066923|ENST00000615138|STAG3;ENST00000416602.6_1_7:66767701-66771051:+|nuORF;ENST00000496157.5_1_7:99775584-99786236:+|nuORF;nc|ENSG00000292277|Q9UJ98-2|STAG3;nc|ENSG00000292277|Q9UJ98|STAG3 39.957323273325 0.0756908302845263 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W{I|L}V{I|L}DSY 9 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W{I|L}V{I|L} + + 30.604 24.447 3.2364 2.6881 2.6881 49.823 0.0 0.0 0.0 0.0 6.156884353030058 0.0 0.0 0 0.3807196863200844 0.0 0.5994850021680094 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W{I|L}V{I|L}DSY 2.6881 - 1223 + 1 2.103 97677.3 1.0 5823 3720 9544 DOHH2_400M_050219_1,9545 DOHH2_400M_050219_1,9545,LVDEWLDSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9546 55.977 800.0 38620.0 25 0 2827.7 -1 0 70 1154.719775378704 0 1154.719775378704 PEAK CID FTMS 0 0 0 -1 0 2 1 H 1 -1 1.5938 0.0 0.0 0.069072 0.0 0.0 1366.8083729236207 800.5316866510374 2167.340059574658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.069072 - 1 + 1 2.103 27361.1 0.5699999928474426 5824 3720 9544 DOHH2_400M_050219_1,9546 DOHH2_400M_050219_1,9546, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9548 55.985 257.0 308640.0 25 0 9339.3 + 44206 YLGEFSITY 9 86 1092.5249751764884 1091.5176987098885 1 1092.522998034954 MULTI CID FTMS 0 0 0 9547 282557.125 0.961725633666611 3 -0.0375518798828125 1 Unmodified _YLGEFSITY_ ENSG00000115268|ENST00000592588|RPS15;ENST00000586096.3_1_19:1440314-1440458:+|nuORF 64.23631603340823 0.0237365939569086 1 [Y{I|L}]GEAY{I|L}TY 9 2 + 73.219 0.0 0.0 6.708 6.708 80.234 0.0 0.0 0.0 19.20818753952375 14.973024840566469 14.973024840566469 0.822194502297009 0 0.5994850021680094 1.6989700043360187 1.9634679910804405 0.0 [Y{I|L}]GEAY{I|L}TY;[Y{I|L}]GE{M(Oxidation (M))|F}S{I|L}TY;[Y{I|L}]SA{M(Oxidation (M))|F}D{I|L}TY;[Y{I|L}]GT{M(Oxidation (M))|F}D{I|L}TY;[Y{I|L}]GEAYT{I|L}Y;[Y{I|L}]GE{M(Oxidation (M))|F}ST{I|L}Y;[Y{I|L}]SA{M(Oxidation (M))|F}DT{I|L}Y;[Y{I|L}]ST[MT]{I|L}TY;[Y{I|L}]GE{[TV]|[{I|L}S]}{M(Oxidation (M))|F}TY;[Y{I|L}]AAYD{I|L}TY 6.708;6.6327;6.3992;5.8943;5.7439;5.6686;5.4351;5.435;5.2398;5.1846 -;+;-;-;-;-;-;-;-;- + 4408 1 2.103 53883.4 1.0 5825 3721 9547 DOHH2_400M_050219_1,9548 DOHH2_400M_050219_1,9548,YLGEFSITY True True YLGEFSITY 55.985374 1092.52299803495 2527265.25 9547.0 ENSG00000115268|ENST00000592588|RPS15;;ENST00000586096.3_1_19:1440314-1440458:+|nuORF 6.436267852783203 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9549 55.998 731.0 192530.0 25 0 15050.0 + 32801 SEFDFIVRY 9 117 588.2899350238791 1174.5653171145582 2 588.2891723513603 MULTI CID FTMS 0 0 0 9547 98364.640625 0.8582727405219791 -3 0.0370903015136718 2 Unmodified _SEFDFIVRY_ ENSG00000185920|ENST00000331920|PTCH1;nc|ENSG00000185920|Q13635-2|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-4|PTCH1 78.7280429016045 0.0178249292250809 1 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}VRY 9 0 + 70.895 0.0 0.0 6.0358 6.0358 82.663 0.0 0.0 0.0 7.147642715192504 4.057653461839934 4.057653461839934 4.057653461839934 0 1.4049471895720984 0.0 0.0 0.9634679910804403 + + {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}VRY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}VYR;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}YVR;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}Y{I|L}VR;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}DY{M(Oxidation (M))|F}{I|L}VR;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}Y[KT]SKW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}YD{M(Oxidation (M))|F}{I|L}VR;{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}[KT]SKW;{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}VR;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}Y[KT]S{[SA]|[TG]}R 6.0358;5.6904;4.6446;3.5863;2.6469;2.4766;2.3532;1.8744;1.751;1.3472 +;-;-;-;-;-;-;-;-;- + 379 + 1 2.103 106628.4 1.0 5826 3721 9547 DOHH2_400M_050219_1,9549 DOHH2_400M_050219_1,9549,SEFDFIVRY True True SEFDFIVRY 55.998049 588.28917235136 581202.75 9547.0 nc|ENSG00000185920|Q13635-2|PTCH1;;nc|ENSG00000185920|Q13635-3|PTCH1;;nc|ENSG00000185920|Q13635-4|PTCH1;;ENSG00000185920|ENST00000331920|PTCH1 5.997491041819255 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9552 56.014 560.0 199670.0 25 0 22226.0 + 6764 EDWIRGVEW 9 108 595.285498848479 1188.556444763758 2 595.2857543826103 MULTI CID FTMS 0 0 0 9551 109125.609375 0.2914428451806998 -6 0.0662460327148437 1 Unmodified _EDWIRGVEW_ ENSG00000134759|ENST00000358232|ELP2;ENST00000536373.5_1_18:33718798-33725056:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2 100.0907132914201 0.0108732765679663 1 [WE]D{I|L}RGVEW 9 2 + 48.623 0.0 0.0 4.091 4.091 76.524 0.0 0.0 0.0 1.7464479396478223 12.04628427264403 1.7464479396478223 4.854771935914002 0 1.274227503252014 0.0 2.353917193908117 0.0 [WE]D{I|L}RGVEW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W{I|L}RGVEW;[MT]{M(Oxidation (M))|F}KS[{I|L}P]D[HN];[VG]{[RE]|[WV]}W{I|L}DEW;[VG]{[RE]|[WV]}{I|L}WDEW;[VG]{[RE]|[WV]}WEVEW;[WE]D{I|L}RGVM[PS];{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}VGS[{I|L}P]D[HN];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W{I|L}RGVM[PS];[VG]{[RE]|[WV]}EEREW 4.091;3.6825;2.5312;2.2617;2.2617;2.2472;2.1738;1.8466;1.7653;1.4665 -;+;-;-;-;-;-;-;-;- + 938 1 2.103 86714.8 1.0 5827 3723 9551 DOHH2_400M_050219_1,9552 DOHH2_400M_050219_1,9552,EDWIRGVEW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9555 56.034 800.0 255550.0 25 0 50779.0 + 24224 MALGHVIVL 9 105 476.7859083386904 951.5572637441808 2 476.7859680056572 MULTI CID FTMS 0 0 0 9554 69404.265625 0.7774039897436444 1 -0.0440826416015625 1 Unmodified _MALGHVIVL_ ENSG00000104613|ENST00000397977|INTS10 36.46614268402704 0.0948557732959553 1 [HV]G{I|L}CV{I|L}V{I|L} 9 5 + 42.534 0.0 0.0 4.4699 4.4699 72.171 0.0 0.0 0.0 0.5115252244738144 16.478174818886373 0.5115252244738144 0.5115252244738144 0 0.7742275032520141 0.0 0.0 0.0 [HV]G{I|L}CV{I|L}V{I|L};{[HG]|PP}V{I|L}CV{I|L}V{I|L};[HV]AVCV{I|L}V{I|L};[HV]G{I|L}AM{I|L}V{I|L};{[HG]|PP}{I|L}VCV{I|L}V{I|L};{[HG]|PP}V{I|L}AM{I|L}V{I|L};[HV]G{I|L}{I|L}VCV{I|L};[HV]G{I|L}VC{I|L}V{I|L};{[HG]|PP}V{I|L}VC{I|L}V{I|L};{[HG]|PP}V{I|L}{I|L}VCV{I|L} 4.4699;4.4162;4.0998;4.0832;4.046;4.0295;3.8372;3.8372;3.7835;3.7835 -;-;-;-;-;-;-;-;-;- 512 1 2.103 158891.6 0.4199999868869781 5828 3725 9554 DOHH2_400M_050219_1,9555 DOHH2_400M_050219_1,9555,MALGHVIVL True True MALGHVIVL 56.034373 476.785968005657 360708.875 9554.0 ENSG00000104613|ENST00000397977|INTS10 5.5765814781188965 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9556 56.048 800.0 74858.0 25 0 6743.8 + -1 LVDEWLDSY 9 94 1138.835995523101 0 1139.027514636517 PEAK CID FTMS 0 0 0 9554 17754.67578125 0.9154526954029146 -1 0.0037803649902343 2 ENST00000416602.6_1_7:66767701-66771051:+|nuORF;ENST00000496157.5_1_7:99775584-99786236:+|nuORF;ENSG00000066923|ENST00000615138|STAG3;nc|ENSG00000292277|Q9UJ98|STAG3;nc|ENSG00000292277|Q9UJ98-2|STAG3 1 SD{I|L}V{I|L}W 6 -1 31.771 0.0 0.0 1.3961 0.0 0.0 1318.2129323530396 241.04573999576408 1559.2586723488037 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SD{I|L}V{I|L}W 1.3961 - 746 + 1 2.103 45012.0 0.6299999952316284 5829 3725 9554 DOHH2_400M_050219_1,9556 DOHH2_400M_050219_1,9556, False False LVDEWLDSY 56.048238 1139.02751463652 1501461.46875 9554.0 ENST00000416602.6_1_7:66767701-66771051:+|nuORF;;ENST00000496157.5_1_7:99775584-99786236:+|nuORF;;ENSG00000066923|ENST00000615138|STAG3;;nc|ENSG00000292277|Q9UJ98|STAG3;;nc|ENSG00000292277|Q9UJ98-2|STAG3 6.392040570576985 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9557 56.062 800.0 39419.0 25 0 2377.2 -1 0 72 1145.586229347554 0 1145.841479480267 PEAK CID FTMS 0 0 0 9554 18046.2109375 0.3261106116133109 -1 0.0037803649902343 3 1 T{I|L}{M(Oxidation (M))|F} 3 -1 10.177 0.0 0.0 0.44459 0.0 0.0 1325.6935025410082 599.2508028619749 1924.944305402983 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L}{M(Oxidation (M))|F} 0.44459 - 61 + 1 2.103 28130.2 0.5600000023841858 5830 3725 9554 DOHH2_400M_050219_1,9557 DOHH2_400M_050219_1,9557, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9560 56.075 377.0 239220.0 25 0 25855.0 + 42746 VVEQLKDWLY 10 112 646.8478531486253 1291.6811533640505 2 646.8483154177666 MULTI CID FTMS 0 0 0 9559 195215.03125 0.6278787285469843 -2 0.0478782653808593 1 Unmodified _VVEQLKDWLY_ ENSG00000164109|ENST00000296509|MAD2L1 73.1962812333195 0.0188336640735478 1 VVEQ{I|L}S[VG]W{I|L}Y 11 3 + 87.03 0.0 0.0 6.7377 6.7377 82.07 0.0 0.0 0.0 14.333308547621158 13.634993639681312 13.634993639681312 2.085521743960328 0 2.6549471895720984 2.0 0.6307196863200843 0.3494850021680094 VVEQ{I|L}S[VG]W{I|L}Y;VVEQ{I|L}QCVV{I|L}Y;VVEQ{I|L}S{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}Y;VVEQ{[SA]|[TG]}WVV{I|L}Y;VVE[AG]{I|L}QCVV{I|L}Y;VVE[AG]{I|L}S[VG]W{I|L}Y;[AG]EVV{I|L}QCVV{I|L}Y;[AG]EVV{I|L}S[VG]W{I|L}Y;VVEQ{[SA]|[TG]}VVW{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}QV{I|L}S[VG]SV{I|L}Y 6.7377;6.5763;6.0351;5.9635;5.8696;5.7605;5.6281;5.519;5.4881;5.4559 -;-;-;-;-;-;-;-;-;- 6366 1 2.103 72115.2 1.0 5831 3727 9559 DOHH2_400M_050219_1,9560 DOHH2_400M_050219_1,9560,VVEQLKDWLY True True VVEQLKDWLY 56.07523 646.848315417767 1733857.25 9559.0 ENSG00000164109|ENST00000296509|MAD2L1 8.091131528218588 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9561 56.089 800.0 36226.0 25 0 3096.1 -1 0 69 839.1906616091728 0 839.1906616091728 PEAK CID FTMS 0 0 0 -1 0 2 1 V 1 -1 6.9897 0.0 0.0 0.41696 0.0 0.0 1294.1657642810424 280.10956751041255 1574.2753317914548 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.41696 - 12 + 1 2.103 27988.6 0.5 5832 3727 9559 DOHH2_400M_050219_1,9561 DOHH2_400M_050219_1,9561, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9562 56.103 800.0 120480.0 25 0 3788.6 -1 0 114 1178.5422052341828 3532.604786302749 3 1178.876879870892 MULTI CID FTMS 0 0 0 9559 82639.9765625 0.6586604977004299 -1 0.0037956237792968 3 1 EY{M(Oxidation (M))|F}ANQQAECV{[WS]|[C(Carbamidomethyl (C)){I|L}]} 13 -1 66.205 0.0 0.0 1.8741 0.0 0.0 1958.9388449959115 0.0 1958.9388449959115 0.0 39.7511916643796 0.0 0.0 0 0.0 0.0 0.0 0.0 EY{M(Oxidation (M))|F}ANQQAECV{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.8741 - 2769 + 1 2.103 62694.9 0.550000011920929 5833 3727 9559 DOHH2_400M_050219_1,9562 DOHH2_400M_050219_1,9562, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9564 56.119 800.0 17341.0 25 0 2949.5 -1 0 33 1017.082873523235 0 1017.082873523235 PEAK CID FTMS 0 0 0 -1 0 1 1 W 1 -1 3.0989 0.0 0.0 0.1525 0.0 0.0 1144.7097401111198 698.3375948541624 1843.047334965282 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.1525 - 11 + 1 2.103 21284.7 0.4600000083446502 5834 3728 9563 DOHH2_400M_050219_1,9564 DOHH2_400M_050219_1,9564, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9565 56.133 800.0 176540.0 25 0 10179.0 + 7076 EELNDLIQRF 10 119 638.8301160367099 1275.6456791402195 2 638.8303100466728 MULTI CID FTMS 0 0 0 9563 128214.1640625 0.5778419949120481 -12 0.1836700439453125 2 Unmodified _EELNDLIQRF_ ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-3|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1 72.96794272382148 0.0188410189619069 1 EE{I|L}ND{I|L}{I|L}QR{M(Oxidation (M))|F} 10 0 + 92.579 0.0 0.0 7.2574 7.2574 83.331 0.0 0.0 0.0 24.25968732272281 2.1670910996394497 2.1670910996394497 2.1670910996394497 0 0.7742275032520141 1.6989700043360187 0.0 1.5994850021680094 + + EE{I|L}ND{I|L}{I|L}QR{M(Oxidation (M))|F};EE{I|L}ND{I|L}{I|L}Q{M(Oxidation (M))|F}R;EE{I|L}ND{I|L}{I|L}[AG]R{M(Oxidation (M))|F};EE{I|L}GGD{I|L}{I|L}QR{M(Oxidation (M))|F};EE{I|L}ND{I|L}{I|L}{M(Oxidation (M))|F}QR;EE{I|L}GGD{I|L}{I|L}Q{M(Oxidation (M))|F}R;EE{I|L}ND{I|L}{I|L}[AG]{M(Oxidation (M))|F}R;EE{I|L}GGD{I|L}{I|L}[AG]R{M(Oxidation (M))|F};EE{I|L}ND{I|L}{I|L}{M(Oxidation (M))|F}[AG]R;EE{I|L}GGD{I|L}{I|L}{M(Oxidation (M))|F}QR 7.2574;7.0875;6.539;6.539;6.4251;6.3691;6.3691;5.8234;5.7066;5.7066 +;-;-;-;-;-;-;-;-;- + 863 + 1 2.103 110668.9 0.9399999976158142 5835 3728 9563 DOHH2_400M_050219_1,9565 DOHH2_400M_050219_1,9565,EELNDLIQRF True True EELNDLIQRF 56.133179 638.830310046673 973866.3125 9563.0 ENSG00000078674|ENST00000325083|PCM1;;nc|ENSG00000078674|Q15154-4|PCM1;;nc|ENSG00000078674|Q15154-5|PCM1;;nc|ENSG00000078674|Q15154-3|PCM1;;nc|ENSG00000078674|Q15154-2|PCM1 6.234508673350017 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9567 56.14 156.0 315180.0 25 0 25579.0 + 38572 TTDDWKDFLY 10 72 652.2957740697104 1302.5769952062208 2 652.2959472537041 MULTI CID FTMS 0 0 0 9566 306978.21875 0.4390938059242892 4 -0.0327835083007812 1 Unmodified _TTDDWKDFLY_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 55.50274090549119 0.048383292844968 1 {[DS]|[MA]|[CV]|TT}DDW{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}Y 10 0 + 39.869 0.0 0.0 3.0608 3.0608 71.916 0.0 0.0 0.0 3.253800256993948 10.93704052456225 3.253800256993948 3.253800256993948 0 1.548455006504028 0.0 0.9489700043360187 0.0 + + {[DS]|[MA]|[CV]|TT}DDW{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}Y;[WM]DW{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}Y;{[DS]|[MA]|[CV]|TT}DD{[SA]|[TG]}[RD]{M(Oxidation (M))|F}{I|L}Y;{[{M(Oxidation (M))|F}D]|MM}{I|L}K[C(Carbamidomethyl (C))D]ET{I|L}Y;{[{M(Oxidation (M))|F}D]|MM}{I|L}D[C(Carbamidomethyl (C))K]ET{I|L}Y;{[DS]|[MA]|[CV]|TT}D{[WS]|[C(Carbamidomethyl (C)){I|L}]}[RD]{M(Oxidation (M))|F}{I|L}Y;{[{M(Oxidation (M))|F}D]|MM}[Y{M(Oxidation (M))|F}]S{M(Oxidation (M))|F}TT{I|L}Y;{[DS]|[MA]|[CV]|TT}D{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[ES]|[DT]|[{I|L}C]}TT{I|L}Y;{[SA]|[TG]}[C(Carbamidomethyl (C))N]W{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q]H{M(Oxidation (M))|F}TT{I|L}Y 3.0608;2.811;2.5677;2.1379;1.7716;1.7706;1.5405;1.4891;1.4886;1.4661 +;-;-;-;-;-;-;-;-;- + 573 1 2.103 47649.1 1.0 5836 3729 9566 DOHH2_400M_050219_1,9567 DOHH2_400M_050219_1,9567,TTDDWKDFLY True True TTDDWKDFLY 56.140077 652.295947253704 7260938.5 9566.0 ENST00000548375.5_1_12:96405582-96408866:-|nuORF;;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;;nc|ENSG00000111144|P09960-4|LTA4H;;nc|ENSG00000111144|P09960-2|LTA4H;;nc|ENSG00000111144|P09960-3|LTA4H;;ENSG00000111144|ENST00000228740|LTA4H 8.950246810913086 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9568 56.154 800.0 33656.0 25 0 2205.2 -1 0 65 885.3324462771416 0 885.3324462771416 PEAK CID FTMS 0 0 0 -1 0 2 1 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.3101 0.0 0.0 1086.3066029040892 532.2538546197874 1618.5604575238767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.3101 - 6 + 1 2.103 24573.0 0.3899999856948852 5837 3729 9566 DOHH2_400M_050219_1,9568 DOHH2_400M_050219_1,9568, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9575 56.19 800.0 224090.0 25 0 65939.0 + 6741 EDMIPTVGF 9 83 1008.4708138483734 1007.4635373817732 1 1008.470080554485 MULTI CID FTMS 0 0 0 9574 148252.3125 0.430570422487914 -9 0.1116294860839843 1 Unmodified _EDMIPTVGF_ ENSG00000134108|ENST00000256496|ARL8B;ENSG00000143862|ENST00000272217|ARL8A;ENST00000399029.3_1_1:28447646-28447811:-|nuORF;ENST00000444332.1_1_3:5164021-5212295:+|nuORF;ENST00000455168.5_1_3:5164021-5220395:+|nuORF;nc|ENSG00000134108|Q9NVJ2-2|ARL8B 133.70201269244603 0.0112873236905593 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}PS{I|L}G{M(Oxidation (M))|F} 9 2 + 92.31 0.0 0.0 9.1626 9.1626 84.747 0.0 0.0 0.0 1.4093282777197658 16.478174818886373 1.4093282777197658 1.4093282777197658 0 1.916386562212267 1.0969100130080565 1.960409376976188 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}PS{I|L}G{M(Oxidation (M))|F};[TP]VEDM{I|L}G{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}PTVG{M(Oxidation (M))|F};[TP]VEMD{I|L}G{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}PSG{I|L}{M(Oxidation (M))|F};[TP]VEDMG{I|L}{M(Oxidation (M))|F};[TP]VEMEVG{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}PTR{M(Oxidation (M))|F};{[TV]|[{I|L}S]}PEDM{I|L}G{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MP{I|L}S{I|L}G{M(Oxidation (M))|F} 9.1626;9.0227;8.8682;8.1809;8.1054;7.9655;7.8865;7.6808;7.6661;7.6283 -;-;+;-;-;-;-;-;-;- + 1823 1 2.103 118941.1 0.6200000047683716 5838 3735 9574 DOHH2_400M_050219_1,9575 DOHH2_400M_050219_1,9575,EDMIPTVGF True True EDMIPTVGF 56.190135 1008.47008055448 1817181.75 9574.0 ENST00000455168.5_1_3:5164021-5220395:+|nuORF;;ENSG00000143862|ENST00000272217|ARL8A;;ENST00000444332.1_1_3:5164021-5212295:+|nuORF;;nc|ENSG00000134108|Q9NVJ2-2|ARL8B;;ENST00000399029.3_1_1:28447646-28447811:-|nuORF;;ENSG00000134108|ENST00000256496|ARL8B 6.749880790710449 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9578 56.211 800.0 50988.0 25 0 2846.5 -1 0 79 1137.5274459138818 4546.080677789128 4 1138.278002917767 MULTI CID FTMS 0 0 0 9577 66106.6796875 0.1179336967619566 -20 0.2584915161132812 1 1 Y 1 -1 5.4846 0.0 0.0 0.12064 0.0 0.0 3769.73016616979 610.2625088814721 4379.992675051262 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.12064 - 2 + 1 2.103 39169.9 0.4699999988079071 5839 3737 9577 DOHH2_400M_050219_1,9578 DOHH2_400M_050219_1,9578, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9583 56.239 800.0 122220.0 25 0 19513.0 + 23370 LTDLVDDNYFY 11 108 689.3146795571913 1376.6148061811823 2 689.3142578005791 MULTI CID FTMS 0 0 0 9582 73935.8359375 0.8006577148457329 1 -0.0163993835449218 1 Unmodified _LTDLVDDNYFY_ ENSG00000174231|ENST00000304992|PRPF8 72.96794272382148 0.0238034416328542 1 [{I|L}T]DV{I|L}DDNY[Y{M(Oxidation (M))|F}] 11 2 + 45.184 0.0 0.0 3.2822 3.2822 68.144 0.0 0.0 0.0 6.6610651992958765 7.367585652254178 6.6610651992958765 0.2422750325201406 0 0.4247425010840047 0.8860566476931632 1.863673220883544 0.3252574989159953 [{I|L}T]DV{I|L}DDNY[Y{M(Oxidation (M))|F}];[{I|L}T]D{I|L}VDDNY[Y{M(Oxidation (M))|F}];[{I|L}V]DT{I|L}DDNY[Y{M(Oxidation (M))|F}];{NN|[MP]|[D{I|L}]|[EV]}TV{I|L}DDNY[Y{M(Oxidation (M))|F}];{NN|[MP]|[D{I|L}]|[EV]}T{I|L}VDDNY[Y{M(Oxidation (M))|F}];[{I|L}T]DV{I|L}DDGGY[Y{M(Oxidation (M))|F}];[{I|L}T]D{I|L}VDDGGY[Y{M(Oxidation (M))|F}];[{I|L}V]{[ET]|[MV]}VDDNY[Y{M(Oxidation (M))|F}];{NN|[MP]|[D{I|L}]|[EV]}T{I|L}[WQ]EY[Y{M(Oxidation (M))|F}];{NN|[MP]|[D{I|L}]|[EV]}VT{I|L}DDNY[Y{M(Oxidation (M))|F}] 3.2822;3.2646;2.7984;2.6056;2.588;2.3828;2.3652;2.2512;2.1553;2.102 -;+;-;-;-;-;-;-;-;- + 718 1 2.103 74082.0 0.4399999976158142 5840 3741 9582 DOHH2_400M_050219_1,9583 DOHH2_400M_050219_1,9583,LTDLVDDNYFY True True LTDLVDDNYFY 56.238951 689.314257800579 496613.46875 9582.0 ENSG00000174231|ENST00000304992|PRPF8 6.45933469136556 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9588 56.267 800.0 35083.0 25 0 3188.1 -1 0 62 1106.2955618237638 0 1106.331103503704 PEAK CID FTMS 0 0 0 9587 16802.31640625 1.0 0 0.0 1 1 YW 2 -1 6.4537 0.0 0.0 0.29194 0.0 0.0 1123.0621186653027 735.3530977838499 1858.4152164491525 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YW 0.29194 - 20 + 1 2.103 26012.8 0.449999988079071 5841 3745 9587 DOHH2_400M_050219_1,9588 DOHH2_400M_050219_1,9588, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9590 56.284 800.0 124400.0 25 0 11989.0 + 6765 EDWIRGVEW 9 110 595.285498848479 1188.556444763758 2 595.2855712771416 MULTI CID FTMS 0 0 0 9589 65775.40625 0.1756670285756778 17 -0.1533660888671875 1 Unmodified _EDWIRGVEW_ ENSG00000134759|ENST00000358232|ELP2;ENST00000536373.5_1_18:33718798-33725056:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2 107.09958533191995 0.0072323465566536 1 EDAD{I|L}RREW 9 4 + 64.896 0.0 0.0 5.4601 5.4601 88.297 0.0 0.0 0.0 30.471354779385308 8.697114610913488 8.697114610913488 13.243923658886189 0 2.011922997584469 1.2218487496163564 0.9247425010840048 0.0 EDAD{I|L}RREW;[WE]D{I|L}RGVEW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W{I|L}RGVEW;ED[VS]{I|L}[DC]R[RP];EDAD{M(Oxidation (M))|F}[PS]R[RP];ED[VS]{M(Oxidation (M))|F}[PS]R[RP];[VG]{[RE]|[WV]}{I|L}WDEW;[MT]ESE[PS]R[RP];[MT]EDE[VG]R[RP];[MT]TDE[PS]R[RP] 5.4601;4.3458;3.9347;3.3547;2.9747;2.6437;2.3165;2.2882;2.0912;1.9753 -;-;+;-;-;-;-;-;-;- + 562 + 1 2.103 79009.4 0.4399999976158142 5842 3746 9589 DOHH2_400M_050219_1,9590 DOHH2_400M_050219_1,9590,EDWIRGVEW True True EDWIRGVEW 56.283826 595.285571277142 3788450.75 9589.0 nc|ENSG00000134759|Q6IA86-3|ELP2;;nc|ENSG00000134759|Q6IA86-4|ELP2;;nc|ENSG00000134759|Q6IA86-5|ELP2;;ENST00000536373.5_1_18:33718798-33725056:+|nuORF;;ENSG00000134759|ENST00000358232|ELP2;;nc|ENSG00000134759|Q6IA86-6|ELP2;;nc|ENSG00000134759|Q6IA86-2|ELP2 8.45633602142334 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9594 56.308 800.0 156190.0 25 0 24274.0 + 19941 LIDLAIDTY 9 94 1036.5561391342285 1035.5488626676283 1 1036.558032214642 MULTI CID FTMS 0 0 0 9593 123775.375 0.5792185924978199 16 -0.1736183166503906 1 Unmodified _LIDLAIDTY_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT 100.37149154755038 0.0107586824602606 1 {I|L}{I|L}DA{I|L}{I|L}DTY 9 2 + 91.322 0.0 0.0 8.8187 8.8187 87.325 0.0 0.0 0.0 9.146518864155126 16.478174818886373 9.146518864155126 3.450528104279016 0 0.6307196863200843 1.3979400086720375 1.341129063296272 0.0 {I|L}{I|L}DA{I|L}{I|L}DTY;{I|L}{I|L}D{I|L}A{I|L}DTY;{I|L}{I|L}DA{I|L}D{I|L}TY;{I|L}{I|L}AD{I|L}{I|L}DTY;[{I|L}A]D{I|L}{I|L}{I|L}DTY;{I|L}{I|L}DA{I|L}DT{I|L}Y;{I|L}{I|L}D{I|L}AD{I|L}TY;[{I|L}A]{I|L}D{I|L}{I|L}DTY;{I|L}{I|L}DA{I|L}TD{I|L}Y;{I|L}{I|L}DAD{I|L}{I|L}TY 8.8187;8.4855;8.1438;8.1055;7.9355;7.8531;7.8106;7.7654;7.6368;7.6104 -;+;-;-;-;-;-;-;-;- + 1838 1 2.103 86313.7 0.5600000023841858 5843 3749 9593 DOHH2_400M_050219_1,9594 DOHH2_400M_050219_1,9594,LIDLAIDTY True True LIDLAIDTY 56.308039 1036.55803221464 1264016.625 9593.0 nc|ENSG00000147162|O15294-3|OGT;;ENSG00000147162|ENST00000373719|OGT;;nc|ENSG00000147162|O15294-2|OGT 4.40570084253947 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9597 56.324 520.0 151850.0 25 0 8794.4 -1 0 95 926.9342187886924 1851.8538846441847 2 927.4362060427666 MULTI CID FTMS 0 0 0 9596 82714.828125 0.2484686350032963 -17 0.1423454284667968 1 1 [YQ][HS]EAQQNA{M(Oxidation (M))|F}YE 13 -1 75.72 0.0 0.0 4.0889 0.0 0.0 0.0 253.15720430654724 253.15720430654724 56.91543654761431 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.3494850021680094 [YQ][HS]EAQQNA{M(Oxidation (M))|F}YE 4.0889 - 1323 1 2.103 56475.2 1.0 5844 3751 9596 DOHH2_400M_050219_1,9597 DOHH2_400M_050219_1,9597, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9598 56.338 800.0 110120.0 25 0 9792.3 + 45454 YTELEAIMY 9 110 566.7648932907283 1131.5152336482563 2 566.7656127810478 MULTI CID FTMS 0 0 0 9596 113196.09375 1.0 0 0.0 2 Unmodified _YTELEAIMY_ ENSG00000133835|ENST00000510025|HSD17B4;ENST00000512029.1_1_5:118832263-118835290:+|nuORF;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4 70.71552829651908 0.0208223590022201 1 [YT]E{I|L}EA 6 3 48.623 0.0 0.0 4.2972 0.0 0.0 0.0 422.1732553652991 422.1732553652991 6.2287219205682405 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.9291746928241125 0.0 + [YT]E{I|L}EA 4.2972 + + 734 1 2.103 71485.1 0.4300000071525574 5845 3751 9596 DOHH2_400M_050219_1,9598 DOHH2_400M_050219_1,9598,YTELEAIMY True True YTELEAIMY 56.337628 566.765612781048 550392.6875 9596.0 ENST00000512029.1_1_5:118832263-118835290:+|nuORF;;nc|ENSG00000133835|P51659-2|HSD17B4;;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;;ENSG00000133835|ENST00000510025|HSD17B4;;nc|ENSG00000133835|P51659-3|HSD17B4 5.906002521514893 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9601 56.358 800.0 50627.0 25 0 1226.4 -1 0 84 1178.5422052341828 3532.604786302749 3 1179.213549792767 MULTI CID FTMS 0 0 0 9600 32528.845703125 0.2592627272133467 24 -0.2408981323242187 1 1 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.19786 0.0 0.0 2251.0758078865365 1131.442001458383 3382.5178093449194 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19786 - 66 + 1 2.103 30795.6 0.4699999988079071 5846 3753 9600 DOHH2_400M_050219_1,9601 DOHH2_400M_050219_1,9601, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9605 56.38 636.0 116680.0 25 0 11341.0 + -1 DLEMQIESL 9 100 547.2578298643841 1092.501106795568 2 547.2581054568291 MULTI CID FTMS 0 0 0 9604 65268.171875 0.6179293709289555 -2 0.0078659057617187 1 Oxidation (M) _QM(Oxidation (M))VEEIESL_ nc|ENSG00000171401|P13646-2|KRT13;ENST00000468313.5_1_17:39657932-39661743:-|nuORF;ENSG00000171401|ENST00000246635|KRT13;P02533;P13646-1;P19001;P08730-1;Q99456;ENSG00000186847|ENST00000167586|KRT14;Q6IFX2;ENSG00000186395|ENST00000269576|KRT10;P13645;nc|ENSG00000171401|P13646-3|KRT13;P02535-1;ENST00000417510.5_1_17:16723272-16723344:-|nuORF;ENSEMBL:ENSP00000377550;ENSG00000187242|ENST00000251643|KRT12 36.12702656103203 0.0967173616627612 1 {NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}Q{I|L} 6 -1 40.112 0.0 0.0 3.6716 0.0 0.0 0.0 344.1469328700195 344.1469328700195 13.82576888900239 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.25 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}Q{I|L} 3.6716 - 463 1 2.103 59619.1 1.0 5847 3756 9604 DOHH2_400M_050219_1,9605 DOHH2_400M_050219_1,9605,QMVEEIESL False False DLEMQIESL 56.379628 547.258105456829 454485.9375 9604.0 nc|ENSG00000171401|P13646-2|KRT13;;ENST00000468313.5_1_17:39657932-39661743:-|nuORF;;ENSG00000171401|ENST00000246635|KRT13;;P02533;;P13646-1;;P19001;;P08730-1;;Q99456;;ENSG00000186847|ENST00000167586|KRT14;;Q6IFX2;;ENSG00000186395|ENST00000269576|KRT10;;P13645;;nc|ENSG00000171401|P13646-3|KRT13;;P02535-1;;ENST00000417510.5_1_17:16723272-16723344:-|nuORF;;ENSEMBL:ENSP00000377550;;ENSG00000187242|ENST00000251643|KRT12 5.3769636154174805 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9606 56.387 393.0 76259.0 25 0 4751.4 -1 0 59 1092.5275422596094 0 1092.518725574017 PEAK CID FTMS 0 0 0 9604 98609.65625 1.0 0 0.0 2 1 E{I|L}DE{I|L} 5 -1 13.443 0.0 0.0 0.61581 0.0 0.0 1308.6685966268376 272.07090173892817 1580.7394983657657 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}DE{I|L} 0.61581 - 104 + 1 2.103 26976.4 1.0 5848 3756 9604 DOHH2_400M_050219_1,9606 DOHH2_400M_050219_1,9606, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9612 56.417 664.0 42922.0 25 0 1036.9 + 3479 CHALITRSCE 10 74 1132.5214627935811 1131.5141863269812 1 1134.996508777142 MULTI CID FTMS 0 0 0 9611 54849.74609375 0.5112350927000187 3 -0.0484123229980468 1 Unmodified _CHALITRSCE_ REV__AluSc8_dup7305|chr6:30493012-30493324:+|1.590752574301526|0.0449135051643763|5.15|48.0|21|3|anti-sense 5.731851221503515 0.7001233259664787 1 {I|L} 1 -1 5.4846 0.0 0.0 0.48471 0.0 0.0 311.1075286338965 704.2977999322874 1015.405328566184 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.48471 + + 4 + 1 2.103 25761.4 1.0 5849 3761 9611 DOHH2_400M_050219_1,9612 DOHH2_400M_050219_1,9612,CHALITRSCE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9615 56.437 800.0 172130.0 25 0 11473.0 + + 44993 AVSPYSIVL 9 105 948.5403760962788 947.5330996296788 1 948.5395385622978 MULTI CID FTMS 0 0 0 9614 114964.375 0.465024033265589 -8 0.0586738586425781 1 Unmodified _YPSIVAVSL_ ENST00000583043.5_1_18:67684852-67806940:-|nuORF;nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN 67.34385681178166 0.0221257235307089 1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}VSAV{I|L} 9 -1 + 92.01 0.0 0.0 9.7105 9.7105 85.752 0.0 0.0 0.0 24.13734275855269 65.56962701565345 24.13734275855269 1.866654986684736 0 0.3054621874040891 2.0 2.337180496500464 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}VSAV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}SG{I|L}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}VASV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}SAVV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}GS{I|L}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}GTVV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}SVAV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SS{I|L}G{I|L}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SS{I|L}AVV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}G{I|L}SV{I|L} 9.7105;9.5135;9.4837;9.467;9.2993;9.2529;9.1316;8.9346;8.8882;8.6908 -;-;-;-;-;-;-;-;-;- 2020 1 2.103 92036.2 0.5299999713897705 5850 3763 9614 DOHH2_400M_050219_1,9615 DOHH2_400M_050219_1,9615,YPSIVAVSL False False AVSPYSIVL 56.437211 948.539538562298 1340933.0 9614.0 ENST00000583043.5_1_18:67684852-67806940:-|nuORF;;nc|ENSG00000176225|Q86VV8-3|RTTN;;ENSG00000176225|ENST00000640769|RTTN 5.810235023498535 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9616 56.451 800.0 96818.0 25 0 6185.0 27034 PEPPVSFPY 9 97 1032.5015807704438 1031.4943043038438 1 1032.502978503704 MULTI CID FTMS 0 0 0 9614 89120.3984375 0.9999241778512372 -1 0.0040016174316406 2 Unmodified _PEPPVSFPY_ ENSG00000125459|ENST00000245564|MSTO1;ENST00000483734.5_1_1:155580745-155584061:+|nuORF;ENST00000494995.5_1_1:155580896-155583988:+|nuORF;nc|ENSG00000125459|Q9BUK6-2|MSTO1;nc|ENSG00000125459|Q9BUK6-3|MSTO1;nc|ENSG00000125459|Q9BUK6-5|MSTO1;nc|ENSG00000125459|Q9BUK6-7|MSTO1 30.22481116460888 0.1466181017706357 1 [WQ]{I|L}C{I|L}S[WP] 8 7 + 37.713 0.0 0.0 3.6562 3.6562 73.826 0.0 0.0 0.0 -2.6666664815711982 0.2287874528033739 -2.6666664815711982 3.534539788859938 0 0.0 0.0 1.309894379144197 0.0 [WQ]{I|L}C{I|L}S[WP];{[ET]|[MV]}AYAS{I|L}{[YD]|[{M(Oxidation (M))|F}M]};[WQ]{I|L}C{I|L}P{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[ET]|[MV]}AS{M(Oxidation (M))|F}S{I|L}{[YD]|[{M(Oxidation (M))|F}M]};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}TAS{I|L}{[YD]|[{M(Oxidation (M))|F}M]};{[ET]|[MV]}AS{I|L}S{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]};{[ET]|[MV]}ASS{M(Oxidation (M))|F}{I|L}{[YD]|[{M(Oxidation (M))|F}M]};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}SQ{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}SAG{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ET]|[MV]}{M(Oxidation (M))|F}SAS{I|L}{[YD]|[{M(Oxidation (M))|F}M]} 3.6562;3.3135;3.2704;3.2103;2.8715;2.684;2.6551;2.6202;2.6138;2.5591 -;-;-;-;-;-;-;-;-;- 1000 + 1 2.103 56329.9 0.5199999809265137 5851 3763 9614 DOHH2_400M_050219_1,9616 DOHH2_400M_050219_1,9616,PEPPVSFPY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9618 56.465 666.0 297100.0 25 0 11076.0 -1 0 152 1137.5274459138818 4546.080677789128 4 1138.028491199017 MULTI CID FTMS 0 0 0 9617 527647.8125 0.8316562848755726 3 -0.0220756530761718 1 1 PRSQME{I|L}N 8 -1 34.039 0.0 0.0 0.74875 0.0 0.0 3219.45487538744 368.15851770572505 3587.6133930931646 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6861818737241735 PRSQME{I|L}N 0.74875 - 4861 + 1 2.103 150955.6 1.0 5852 3764 9617 DOHH2_400M_050219_1,9618 DOHH2_400M_050219_1,9618, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9622 56.49 800.0 148620.0 25 0 19581.0 + 40082 VGHPFVIQL 9 111 505.2950236767053 1008.5754944202108 2 505.2959777712822 MULTI CID FTMS 0 0 0 9621 98032.6640625 0.8143823111548454 -3 0.0220756530761718 1 Unmodified _VGHPFVIQL_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 40.44857923139169 0.0729940656229577 1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}HGVQ{I|L} 9 6 + 56.811 0.0 0.0 5.6328 5.6328 82.771 0.0 0.0 0.0 5.949651745633616 16.478174818886373 5.949651745633616 5.949651745633616 0 0.7302046884880937 0.9208187539523752 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}HGVQ{I|L};[AG]{I|L}[KS]HGVQ{I|L};[AG][KS]{I|L}HGVQ{I|L};[VP]{M(Oxidation (M))|F}{I|L}HGVQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{[HG]|PP}V{I|L}Q{I|L};[AG][KS]{I|L}HRQ{I|L};[AG]{I|L}[KS]HRQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}HGV[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{[HG]|PP}{I|L}VQ{I|L};[AG][KS]{[HG]|PP}V{I|L}Q{I|L} 5.6328;5.0429;5.0429;5.0183;5.0183;4.8683;4.8683;4.7198;4.5452;4.4284 -;-;-;-;-;-;-;-;-;- 502 1 2.103 95082.2 0.3499999940395355 5853 3767 9621 DOHH2_400M_050219_1,9622 DOHH2_400M_050219_1,9622,VGHPFVIQL True True VGHPFVIQL 56.489523 505.295977771282 597794.0625 9621.0 ENSG00000082898|ENST00000401558|XPO1;;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 6.208080609639485 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9625 56.51 800.0 213240.0 25 0 23347.0 + 32927 SELDLISRL 9 116 523.2980154574491 1044.581477981698 2 523.2982665896416 MULTI CID FTMS 0 0 0 9624 107588.2734375 0.3873600501984773 -8 0.0909156799316406 1 Unmodified _SELDLISRL_ ENSG00000100714|ENST00000652337|MTHFD1 100.7086487251713 0.0106210784076588 1 {[ES]|[DT]|[{I|L}C]}{I|L}D{I|L}{I|L}SR{I|L} 9 0 {[ES]|[DT]|[{I|L}C]} + + 76.494 7.7288 3.5769 7.3229 7.3229 63.816 0.0 0.0 0.0 0.0 42.583559388717376 0.0 0.0 0 1.6549471895720984 0.0 1.1549471895720984 1.2689301784845295 + + {[ES]|[DT]|[{I|L}C]}{I|L}D{I|L}{I|L}SR{I|L} 7.3229 + + 403 + 1 2.103 130821.5 0.8500000238418579 5854 3769 9624 DOHH2_400M_050219_1,9625 DOHH2_400M_050219_1,9625,SELDLISRL True True SELDLISRL 56.509962 523.298266589642 1256108.375 9624.0 ENSG00000100714|ENST00000652337|MTHFD1 3.157591958840688 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9626 56.524 800.0 134780.0 25 0 15258.0 + 38001 TNTLRILAL 9 119 507.8190361515777 1013.6235193699556 2 507.8190185427666 MULTI CID FTMS 0 0 0 9624 90850.9921875 0.3541850196918239 -9 0.0949516296386718 2 Unmodified _TNTLRILAL_ ENSG00000189091|ENST00000302516|SF3B3 121.5340881639634 0.0009571029376058 1 {[QS]|[NT]}T{I|L}R{I|L}{I|L}A{I|L} 9 0 + 94.05 0.0 0.0 9.2786 9.2786 96.006 0.0 0.0 0.0 12.703037561203857 16.478174818886387 12.703037561203857 12.703037561203857 0 2.167735320183944 1.0969100130080565 1.1203715150305282 1.7346368802282015 + + {[QS]|[NT]}T{I|L}R{I|L}{I|L}A{I|L};[AG]ST{I|L}R{I|L}{I|L}A{I|L};{[QS]|[NT]}T{I|L}R{I|L}A{I|L}{I|L};{[QS]|[NT]}T{I|L}RA{I|L}{I|L}{I|L};[AG]ST{I|L}R{I|L}A{I|L}{I|L};[AG]ST{I|L}RA{I|L}{I|L}{I|L};[AG][RV]{[DS]|[MA]|[CV]|TT}{I|L}{I|L}A{I|L};[AG][RV]{[DS]|[MA]|[CV]|TT}{I|L}A{I|L}{I|L};[AG][RV]{[DS]|[MA]|[CV]|TT}A{I|L}{I|L}{I|L};[NG]{I|L}{I|L}[KQ][KT]{I|L} 9.2786;8.0254;7.6684;6.4309;6.4152;5.1776;4.9859;3.3757;2.1382;0.35003 +;-;-;-;-;-;-;-;-;- + 238 1 2.103 83294.6 0.3499999940395355 5855 3769 9624 DOHH2_400M_050219_1,9626 DOHH2_400M_050219_1,9626,TNTLRILAL True True TNTLRILAL 56.523777 507.819018542767 1192553.5 9624.0 ENSG00000189091|ENST00000302516|SF3B3 5.158648490905762 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9631 56.547 508.0 312180.0 25 0 80996.0 -1 0 67 611.3726014164918 610.3653249498917 1 611.3724853396416 MULTI CID FTMS 0 0 0 9630 151672.15625 0.6986632790401405 5 -0.0508918762207031 1 1 {I|L}W 2 -1 16.454 0.0 0.0 2.6957 0.0 0.0 293.1919373539917 0.0 293.1919373539917 0.0 13.354706403678875 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}W 2.6957 - 8 + 1 2.103 121876.0 1.0 5856 3773 9630 DOHH2_400M_050219_1,9631 DOHH2_400M_050219_1,9631, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9634 56.561 388.0 397650.0 25 0 27197.0 + 6966 EEIFGTIGM 9 101 996.4701483854458 995.4628719188456 1 996.470263659954 MULTI CID FTMS 0 0 0 9633 274799.25 0.1074623372418237 -15 0.1525650024414062 1 Unmodified _EEIFGTIGM_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 162.95088124538222 0.0007106222868585 1 EE{I|L}{M(Oxidation (M))|F}GT{I|L}GM 9 0 + 81.895 0.0 0.0 8.2268 8.2268 89.697 0.0 0.0 0.0 6.575773191777927 13.46787486224656 6.575773191777927 6.575773191777927 0 1.6976212463643423 0.958607314841775 2.753083433768432 0.0 + + EE{I|L}{M(Oxidation (M))|F}GT{I|L}GM;{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}GT{I|L}GM;EE{I|L}{M(Oxidation (M))|F}GTG{I|L}M;{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}GTG{I|L}M;[{I|L}T]G{M(Oxidation (M))|F}EE{I|L}GM;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}EGT{I|L}GM;EE{I|L}{M(Oxidation (M))|F}GGT{I|L}M;[{I|L}T]G{M(Oxidation (M))|F}EEG{I|L}M;EE{I|L}{M(Oxidation (M))|F}GG{I|L}TM;EE{I|L}{M(Oxidation (M))|F}NT{I|L}M 8.2268;7.5662;7.2465;6.5859;6.5436;5.8427;5.757;5.5633;5.5545;5.5457 +;-;-;-;-;-;-;-;-;- + 8571 1 2.103 104498.8 1.0 5857 3775 9633 DOHH2_400M_050219_1,9634 DOHH2_400M_050219_1,9634,EEIFGTIGM True True EEIFGTIGM 56.560747 996.470263659954 14854493.0 9633.0 ENSG00000126457|ENST00000454376|PRMT1;;nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;;nc|ENSG00000126457|Q99873-5|PRMT1 7.508285363515218 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9635 56.575 800.0 105500.0 25 0 3795.9 -1 0 100 828.3912170383197 3309.5357622868787 4 828.8928710818291 MULTI CID FTMS 0 0 0 9633 68571.6328125 0.3559690318988669 -5 0.0274276733398437 2 1 D{I|L}{I|L}Y 4 -1 40.745 0.0 0.0 1.2312 0.0 0.0 2787.2695736035403 0.0 2787.2695736035403 0.0 19.58674701179433 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 D{I|L}{I|L}Y 1.2312 - 114 1 2.103 64398.3 0.4099999964237213 5858 3775 9633 DOHH2_400M_050219_1,9635 DOHH2_400M_050219_1,9635, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9637 56.583 298.0 299020.0 25 0 21998.0 -1 0 97 926.9342187886924 1851.8538846441847 2 926.935107409954 MULTI CID FTMS 0 0 0 9636 186737.296875 0.542061716328044 9 -0.0971794128417968 1 1 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}YQV 13 -1 86.033 0.0 0.0 4.6458 0.0 0.0 0.0 155.08307295122555 155.08307295122555 62.32844133917818 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 1.079689690656103 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}YQV 4.6458 - 1696 1 2.103 64826.5 1.0 5859 3776 9636 DOHH2_400M_050219_1,9637 DOHH2_400M_050219_1,9637, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9640 56.598 488.0 165080.0 25 0 23493.0 + 8310 WIDFDNDYKTLY 12 104 796.8676505964752 1591.7207482597505 2 796.8688232302666 MULTI CID FTMS 0 0 0 9639 94818.796875 0.6042278604226765 -4 0.0394515991210937 1 Unmodified _EQYPRDWHLWY_ ENSG00000196305|ENST00000443024|IARS1 2.9952420565917617 0.861016188266951 1 [W{I|L}]D{M(Oxidation (M))|F}D[DN]Y[KT]{I|L}Y 12 10 + 53.157 0.0 0.0 3.3396 3.3396 84.179 0.0 0.0 0.0 18.045766444545343 7.477656990787693 7.477656990787693 53.15684148339983 0 0.805462187404089 2.0 0.3252574989159953 0.0 [W{I|L}]D{M(Oxidation (M))|F}D[DN]Y[KT]{I|L}Y 3.3396 - 482 + 1 2.103 57926.8 1.0 5860 3778 9639 DOHH2_400M_050219_1,9640 DOHH2_400M_050219_1,9640,EQYPRDWHLWY False False WIDFDNDYKTLY 56.597797 796.868823230267 888891.625 9639.0 ENSG00000196305|ENST00000443024|IARS1 7.216342449188232 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9641 56.612 800.0 100970.0 25 0 5421.1 -1 0 71 1104.1861198918248 3309.5365302756745 3 1104.515917956829 MULTI CID FTMS 0 0 0 9639 93094.53125 1.0 0 0.0 2 1 {[CP]|[EA]}S{M(Oxidation (M))|F}GSA 7 -1 43.984 0.0 0.0 1.329 0.0 0.0 0.0 2657.197766969125 2657.197766969125 33.01493210686104 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 {[CP]|[EA]}S{M(Oxidation (M))|F}GSA 1.329 - 67 + 1 2.103 57043.1 0.5099999904632568 5861 3778 9639 DOHH2_400M_050219_1,9641 DOHH2_400M_050219_1,9641, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9642 56.625 800.0 250430.0 25 0 27748.0 -1 0 87 751.6991269421113 2252.075551426534 3 751.6998168826103 MULTI CID FTMS 0 0 0 9639 91541.2421875 0.4213127544014754 -12 0.1173210144042968 3 1 A[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 8 -1 59.641 0.0 0.0 2.6483 0.0 0.0 1327.6889427186577 0.0 1327.6889427186577 0.0 40.76728783671072 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 A[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.6483 - 128 1 2.103 153769.7 0.4300000071525574 5862 3778 9639 DOHH2_400M_050219_1,9642 DOHH2_400M_050219_1,9642, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9647 56.654 800.0 165240.0 25 0 11830.0 + 11319 GEWERYIQW 9 101 633.7987070095255 1265.582861085851 2 633.7988769412041 MULTI CID FTMS 0 0 0 9646 60426.3828125 0.518655207391955 -8 0.0904655456542968 1 Unmodified _GEWERYIQW_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1 70.33199760932243 0.0209706178985989 1 ERWY{I|L}QW 7 4 53.835 0.0 0.0 4.2538 0.0 0.0 186.07954604316564 0.0 186.07954604316564 0.0 16.74652041911294 0.0 0.0 0 1.5228787452803376 0.0 0.6109243748081782 0.3252574989159953 ERWY{I|L}QW 4.2538 - 562 1 2.103 102811.5 0.959999978542328 5863 3782 9646 DOHH2_400M_050219_1,9647 DOHH2_400M_050219_1,9647,GEWERYIQW True True GEWERYIQW 56.653999 633.798876941204 460337.375 9646.0 ENST00000465029.5_1_2:111419157-111435602:-|nuORF;;nc|ENSG00000169679|O43683-2|BUB1;;ENSG00000169679|ENST00000302759|BUB1 7.018414497375488 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9648 56.664 554.0 74750.0 25 0 6160.6 + -1 TLLDIDNTRMTLDDF 15 85 899.930263570514 1797.8459742078278 2 899.9282714724541 MULTI CID FTMS 0 0 0 9646 78627.96875 1.0 0 0.0 2 ENSG00000171403|ENST00000246662|KRT9;P35527 1 [{I|L}T]{I|L}D 4 -1 45.49 0.0 0.0 2.5302 0.0 0.0 0.0 1352.5815448467529 1352.5815448467529 23.2711470149615 0.0 0.0 0.0 0 1.0 2.0 0.3807196863200844 0.0 [{I|L}T]{I|L}D 2.5302 - 64 1 2.103 35137.5 1.0 5864 3782 9646 DOHH2_400M_050219_1,9648 DOHH2_400M_050219_1,9648, False False TLLDIDNTRMTLDDF 56.663751 899.928271472454 886164.3125 9646.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 6.411623001098633 2.0 False 15.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9652 56.684 563.0 29891.0 25 0 4807.0 -1 0 36 1183.888372687574 0 1183.890673816204 PEAK CID FTMS 0 0 0 -1 0 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 21083.8 1.0 5865 3785 9651 DOHH2_400M_050219_1,9652 DOHH2_400M_050219_1,9652, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9656 56.708 800.0 157970.0 25 0 5730.7 + 32884 SEIEYYAML 9 115 1118.507823850891 1117.5005473842912 1 1118.507861316204 MULTI CID FTMS 0 0 0 9655 91284.1015625 0.5948161488048713 2 -0.0203742980957031 1 Unmodified _SEIEYYAML_ ENSG00000156482|ENST00000287038|RPL30 109.62928328672726 0.0058899017516516 1 {[QN]|[E{I|L}]|[KN]}SEYYAM{I|L} 9 2 + 97.405 0.0 0.0 8.7163 8.7163 85.118 0.0 0.0 0.0 1.8791654952092784 16.478174818886373 1.8791654952092784 1.8791654952092784 0 1.2614393726401687 1.0457574905606752 2.4489700043360187 0.0 {[QN]|[E{I|L}]|[KN]}SEYYAM{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}EYYAM{I|L};{[QN]|[E{I|L}]|[KN]}SEYAYM{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}EYAYM{I|L};{[QN]|[E{I|L}]|[KN]}ESYYAM{I|L};{[QN]|[E{I|L}]|[KN]}YC{I|L}YAM{I|L};{[QN]|[E{I|L}]|[KN]}SEYS{M(Oxidation (M))|F}M{I|L};{[QN]|[E{I|L}]|[KN]}SYEYAM{I|L};[{I|L}T]DEYYAM{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}EYS{M(Oxidation (M))|F}M{I|L} 8.7163;8.5481;8.3477;8.1795;7.6171;7.5411;7.4504;7.3612;7.3535;7.2822 -;+;-;-;-;-;-;-;-;- + 11298 1 2.103 82994.7 0.5899999737739563 5866 3788 9655 DOHH2_400M_050219_1,9656 DOHH2_400M_050219_1,9656,SEIEYYAML True True SEIEYYAML 56.708473 1118.5078613162 992905.8125 9655.0 ENSG00000156482|ENST00000287038|RPL30 8.145981788635254 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9661 56.737 800.0 113080.0 25 0 11286.0 24303 MCHLMEDR 8 116 517.7126893374755 1033.4108257417508 2 517.7128173708916 MULTI CID FTMS 0 0 0 9660 20628.953125 0.1504116330673114 1 -0.0163726806640625 1 Unmodified _MCHLMEDR_ ENSG00000103197|ENST00000219476|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-4|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-7|TSC2 9.347437153973935 0.7675937258251505 1 EE{I|L} 3 7 23.468 0.0 0.0 2.2709 0.0 0.0 0.0 659.2273653619749 659.2273653619749 -2.730012720637376 0.0 -2.730012720637376 0.0 0 0.0 1.3010299956639813 0.0 0.0 EE{I|L} 2.2709 - 91 + 1 2.103 72793.7 0.5400000214576721 5867 3792 9660 DOHH2_400M_050219_1,9661 DOHH2_400M_050219_1,9661,MCHLMEDR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9664 56.757 800.0 297380.0 25 0 56458.0 + 45556 YVDILPYDY 9 133 1160.5500627535116 1159.5427862869117 1 1160.550585925579 MULTI CID FTMS 0 0 0 9663 193278.828125 0.4728901342795434 -7 0.05267333984375 1 Unmodified _YVDILPYDY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 74.92900055777586 0.0191935851694334 1 [YV]D{I|L}{I|L}PYDY 9 0 + 64.444 0.0 0.0 5.5577 5.5577 78.401 0.0 0.0 0.0 2.218487496163561 14.09256854528806 2.218487496163561 2.218487496163561 0 1.91944517631652 1.0457574905606752 0.0 0.0 + + [YV]D{I|L}{I|L}PYDY;{NN|[MP]|[D{I|L}]|[EV]}VY{I|L}PYDY;{NN|[MP]|[D{I|L}]|[EV]}YV{I|L}PYDY;[YV]EV{I|L}PYDY;[Y{I|L}]DV{I|L}PYDY;[YV]D{I|L}{I|L}{M(Oxidation (M))|F}{I|L}DY;[YV]{I|L}D{I|L}PYDY;[YV]D{I|L}P{I|L}YDY;{NN|[MP]|[D{I|L}]|[EV]}{I|L}YVPYDY;{NN|[MP]|[D{I|L}]|[EV]}{I|L}VYPYDY 5.5577;5.3663;5.2828;4.9549;4.8971;4.7453;4.6596;4.6573;4.6314;4.6314 +;-;-;-;-;-;-;-;-;- + 2991 1 2.103 143456.5 0.5799999833106995 5868 3794 9663 DOHH2_400M_050219_1,9664 DOHH2_400M_050219_1,9664,YVDILPYDY True True YVDILPYDY 56.757234 1160.55058592558 5333305.5 9663.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 9.126840273539225 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9665 56.771 800.0 113570.0 25 0 35382.0 + 42863 VVLHGRGG 8 80 397.736641223081 793.458729512962 2 397.7364684939384 MULTI CID FTMS 0 0 0 9663 88904.53125 1.0 0 0.0 2 Unmodified _VVLHGRGG_ REV__ENST00000379026.6_1_19:36133589-36134644:+|nuORF 0.7936320650641473 0.8195151834710337 1 M{[QS]|[NT]} 3 -1 8.9524 0.0 0.0 1.1283 0.0 0.0 429.3243447144485 0.0 429.3243447144485 0.0 7.358631114164781 0.0 0.0 0 0.0 0.0 0.0 0.0 M{[QS]|[NT]} 1.1283 - 10 1 2.103 75058.9 0.3799999952316284 5869 3794 9663 DOHH2_400M_050219_1,9665 DOHH2_400M_050219_1,9665,VVLHGRGG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9666 56.785 800.0 234180.0 25 0 23533.0 + 20584 LLNWSVLY 8 90 1007.5561691736434 1006.5488927070434 1 1007.555163562298 MULTI CID FTMS 0 0 0 9663 80777.40625 0.0651095958730894 -13 0.1072120666503906 3 Unmodified _LLNWSVLY_ REV__ENST00000540651.5_1_1:228286768-228286816:+|nuORF 48.345845343767074 0.1470278396477103 1 [NP]A{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y 9 -1 + 71.094 0.0 0.0 7.0631 7.0631 83.598 0.0 0.0 0.0 6.020599913279625 16.478174818886373 6.020599913279625 2.768024924119672 0 0.0 0.0 0.0 1.9489700043360187 [NP]A{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y;[NP]A{M(Oxidation (M))|F}{I|L}{I|L}G{I|L}Y;[QP]G{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y;{I|L}{I|L}NPA{M(Oxidation (M))|F}G{I|L}Y;[NP]A{M(Oxidation (M))|F}G{I|L}{I|L}{I|L}Y;[QP]G{M(Oxidation (M))|F}{I|L}{I|L}G{I|L}Y;[NP]A{I|L}{I|L}{M(Oxidation (M))|F}G{I|L}Y;[NP]A{I|L}{M(Oxidation (M))|F}G{I|L}{I|L}Y;[QP]{M(Oxidation (M))|F}G{I|L}G{I|L}{I|L}Y;[NP]A{I|L}{M(Oxidation (M))|F}{I|L}G{I|L}Y 7.0631;6.7881;6.465;6.381;6.1994;6.19;6.1562;6.1203;5.8935;5.8453 -;-;-;-;-;-;-;-;-;- 1448 1 2.103 123163.7 1.0 5870 3794 9663 DOHH2_400M_050219_1,9666 DOHH2_400M_050219_1,9666,LLNWSVLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9667 56.796 638.0 67513.0 25 0 2558.4 -1 0 84 1096.2052885993771 3285.594036398332 3 1096.876391589642 MULTI CID FTMS 0 0 0 9663 72453.4609375 0.6497308435553606 -7 0.05267333984375 4 1 [MN]R 3 -1 12.447 0.0 0.0 0.37884 0.0 0.0 0.0 2881.3790455138187 2881.3790455138187 4.744237387763093 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [MN]R 0.37884 - 35 1 2.103 33875.2 1.0 5871 3794 9663 DOHH2_400M_050219_1,9667 DOHH2_400M_050219_1,9667, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9671 56.818 682.0 136510.0 25 0 8618.9 27966 PLVSDLSLV 9 102 942.5506907600015 941.5434142934016 1 944.5580932497978 MULTI CID FTMS 0 0 0 9670 150740.3125 0.1867976823206782 -12 0.1320419311523437 1 Unmodified _PLVSDLSLV_ ENSG00000198722|ENST00000635942|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B;nc|ENSG00000198722|O14795|UNC13B 30.22481116460888 0.1466181017706357 1 [{I|L}P]VVSMSV 8 4 43.682 0.0 0.0 4.6394 0.0 0.0 0.0 126.0649354695272 126.0649354695272 18.494850021680087 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.8494850021680094 0.0 [{I|L}P]VVSMSV 4.6394 - 890 1 2.103 65005.8 1.0 5872 3797 9670 DOHH2_400M_050219_1,9671 DOHH2_400M_050219_1,9671,PLVSDLSLV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9674 56.839 800.0 979610.0 25 0 172760.0 + 45400 YTAVVPLVY 9 124 1024.5714074049376 1023.5641309383376 1 1024.572680652142 MULTI CID FTMS 0 0 0 9673 110018.6015625 0.6113046099420392 3 -0.0794410705566406 1 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 123.09622228370866 0.00035690919455 1 {[VA]|[{I|L}G]}TYVP{I|L}VY 9 4 + 86.588 0.0 0.0 8.4594 8.4594 85.068 0.0 0.0 0.0 2.1261804213811217 6.643943297944489 2.1261804213811217 2.1261804213811217 0 1.904046158504892 1.3979400086720375 1.798455006504028 0.0 {[VA]|[{I|L}G]}TYVP{I|L}VY;[YT]AVVP{I|L}VY;[{I|L}P]VYTAVVY;{[VA]|[{I|L}G]}TYVP{I|L}YV;{[VA]|[{I|L}G]}TYP{I|L}VVY;[YT]VAVP{I|L}VY;{[VA]|[{I|L}G]}TVYP{I|L}VY;[YT]AVVP{I|L}YV;[YT]AVP{I|L}VVY;[YV]TAVP{I|L}VY 8.4594;8.2517;8.0364;7.8103;7.7673;7.7495;7.6338;7.6026;7.5596;7.5383 -;+;-;-;-;-;-;-;-;- + 5674 1 2.103 483776.2 0.6000000238418579 5873 3799 9673 DOHH2_400M_050219_1,9674 DOHH2_400M_050219_1,9674,YTAVVPLVY True True YTAVVPLVY 56.838635 1024.57268065214 706882221.0 9673.0 ENSG00000132465|ENST00000254801|JCHAIN 8.277693430582682 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9675 56.853 800.0 26752.0 25 0 2800.6 -1 0 43 1041.776904284954 0 1041.776904284954 PEAK CID FTMS 0 0 0 -1 0 2 1 Y 1 -1 5.4846 0.0 0.0 0.26349 0.0 0.0 975.9929432361208 939.4519137018186 1915.44485693794 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.26349 - 1 + 1 2.103 23393.9 0.5199999809265137 5874 3799 9673 DOHH2_400M_050219_1,9675 DOHH2_400M_050219_1,9675, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9676 56.866 800.0 82144.0 25 0 4393.4 -1 0 79 1186.5545562152215 2371.094559497244 2 1187.560839831829 MULTI CID FTMS 0 0 0 9673 88437.109375 0.5224994230325409 -29 0.2984542846679687 3 1 PPPPP 5 -1 27.959 0.0 0.0 1.1792 0.0 0.0 1528.6653188560915 354.1409700983032 1882.8062889543944 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPPP 1.1792 - 138 + 1 2.103 43132.8 0.4900000095367431 5875 3799 9673 DOHH2_400M_050219_1,9676 DOHH2_400M_050219_1,9676, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9677 56.88 800.0 32805.0 25 0 2236.7 -1 0 65 921.8259155154228 0 921.8259155154228 PEAK CID FTMS 0 0 0 -1 0 4 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 23820.0 0.4399999976158142 5876 3799 9673 DOHH2_400M_050219_1,9677 DOHH2_400M_050219_1,9677, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9679 56.898 800.0 96832.0 25 0 9324.5 -1 0 54 751.6991269421113 2252.075551426534 3 752.0333740115166 MULTI CID FTMS 0 0 0 9678 27201.126953125 0.1176063588166728 13 -0.1900253295898437 1 1 A[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 8 -1 55.394 0.0 0.0 2.4597 0.0 0.0 1327.6898534804552 0.0 1327.6898534804552 0.0 47.94653786155799 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 A[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.4597 - 49 1 2.103 69931.1 0.6200000047683716 5877 3800 9678 DOHH2_400M_050219_1,9679 DOHH2_400M_050219_1,9679, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9682 56.918 800.0 116620.0 25 0 7025.6 + 29453 QLIDKVWQL 9 128 571.8317244361989 1141.6488959391977 2 571.8321411013603 MULTI CID FTMS 0 0 0 9681 79399.5625 0.718471779934003 1 -0.0281829833984375 1 Unmodified _QLIDKVWQL_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 115.6920309560759 0.0032017028976397 1 [Q{I|L}]{I|L}TWQ{I|L}Q{I|L} 9 4 + 54.347 0.0 0.0 4.7604 4.7604 78.34 0.0 0.0 0.0 10.278646112152792 24.457932731903675 10.278646112152792 4.43697499232713 0 1.4322333069283657 1.5228787452803376 0.5994850021680094 0.9291746928241126 [Q{I|L}]{I|L}TWQ{I|L}Q{I|L};[Q{I|L}]T{I|L}WQ{I|L}Q{I|L};[Q{I|L}]{I|L}TW[AG]{I|L}Q{I|L};[AG]{I|L}{I|L}TWQ{I|L}Q{I|L};[Q{I|L}]{I|L}T{I|L}QWQ{I|L};[AG]{I|L}T{I|L}WQ{I|L}Q{I|L};[Q{I|L}]{I|L}PQG[{M(Oxidation (M))|F}V]Q{I|L};[Q{I|L}]TW{I|L}Q{I|L}Q{I|L};[Q{I|L}]T{I|L}W[AG]{I|L}Q{I|L};[Q{I|L}]T{I|L}{I|L}QWQ{I|L} 4.7604;4.3717;3.9538;3.836;3.752;3.6875;3.6568;3.6254;3.5651;3.3634 -;-;-;-;-;-;-;-;-;- 2029 1 2.103 75742.2 0.5400000214576721 5878 3802 9681 DOHH2_400M_050219_1,9682 DOHH2_400M_050219_1,9682,QLIDKVWQL True True QLIDKVWQL 56.918043 571.83214110136 487422.3125 9681.0 nc|ENSG00000129657|Q92503-3|SEC14L1;;nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;ENST00000587491.5_1_17:75207779-75210102:+|nuORF 3.393388350804647 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9683 56.924 320.0 327480.0 25 0 199910.0 -1 IVAVKKCM 8 25 964.5332736269654 963.5259971603654 1 964.5316650271416 MULTI CID FTMS 0 0 0 9681 120098.1015625 0.3233820251210682 -11 0.1852760314941406 2 Carbamidomethyl (C),Oxidation (M) _IVAVKKC(Carbamidomethyl (C))M(Oxidation (M))_ ENST00000340208.9_2_5:88119704-88183347:-|nuORF 5.230669730166228 0.792582437072536 1 {I|L}C 2 -1 20.969 0.0 0.0 2.1763 0.0 0.0 0.0 744.4282653075218 744.4282653075218 20.96910013008056 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}C 2.1763 - 1 + 1 2.103 76539.0 1.0 5879 3802 9681 DOHH2_400M_050219_1,9683 DOHH2_400M_050219_1,9683,IVAVKKCM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9684 56.93 333.0 65888.0 25 0 12732.0 -1 0 28 1182.880175769329 0 1182.880175769329 PEAK CID FTMS 0 0 0 -1 0 3 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 24276.2 1.0 5880 3802 9681 DOHH2_400M_050219_1,9684 DOHH2_400M_050219_1,9684, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9687 56.95 800.0 43043.0 25 0 3724.5 -1 0 72 1176.088305652142 0 1176.088305652142 PEAK CID FTMS 0 0 0 -1 0 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 29662.4 0.5600000023841858 5881 3804 9686 DOHH2_400M_050219_1,9687 DOHH2_400M_050219_1,9687, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9688 56.964 800.0 147870.0 25 0 7254.3 -1 0 92 791.3732727900846 2371.0979889704536 3 791.7061035037041 MULTI CID FTMS 0 0 0 9686 84548.359375 0.3181972463690221 -53 0.6217460632324219 2 1 {[HG]|PP}APPGDCNRQM 12 -1 43.313 0.0 0.0 1.8267 0.0 0.0 0.0 1104.5479987633412 1104.5479987633412 12.902215944156907 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.7742275032520141 0.0 {[HG]|PP}APPGDCNRQM 1.8267 - 7130 1 2.103 87490.2 0.4699999988079071 5882 3804 9686 DOHH2_400M_050219_1,9688 DOHH2_400M_050219_1,9688, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9689 56.971 405.0 76421.0 25 0 5667.4 -1 0 55 1081.5292108653512 3241.565803196254 3 1081.869189441204 MULTI CID FTMS 0 0 0 9686 86268.40625 0.168135579965609 -13 0.2174263000488281 3 1 VM{[QV]|[N{I|L}]|[RA]|[KV]} 4 -1 14.693 0.0 0.0 0.45326 0.0 0.0 2766.32110066769 0.0 2766.32110066769 0.0 7.703037561203843 0.0 0.0 0 0.0 0.0 0.0 0.0 VM{[QV]|[N{I|L}]|[RA]|[KV]} 0.45326 - 16 1 2.103 29869.2 1.0 5883 3804 9686 DOHH2_400M_050219_1,9689 DOHH2_400M_050219_1,9689, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9693 56.995 800.0 40380.0 25 0 4117.8 -1 0 52 1184.5272986401014 0 1184.852343738079 PEAK CID FTMS 0 0 0 9692 61738.15234375 1.0 0 0.0 1 1 V 1 -1 6.9897 0.0 0.0 0.29529 0.0 0.0 1183.467486829228 1081.4833468072875 2264.950833636516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.29529 - 2 + 1 2.103 28185.6 0.7599999904632568 5884 3807 9692 DOHH2_400M_050219_1,9693 DOHH2_400M_050219_1,9693, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9694 57.009 800.0 115460.0 25 0 63653.0 -1 0 46 728.4880374763301 727.48076100973 1 728.4871093630791 MULTI CID FTMS 0 0 0 9692 100725.7421875 1.0 0 0.0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.103 69902.7 0.5899999737739563 5885 3807 9692 DOHH2_400M_050219_1,9694 DOHH2_400M_050219_1,9694, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9695 57.014 245.0 69283.0 25 0 6977.7 -1 0 44 911.1923705935478 0 911.1923705935478 PEAK CID FTMS 0 0 0 -1 0 3 1 P 1 -1 2.4743 0.0 0.0 0.13592 0.0 0.0 1173.0600208728392 547.2272432916624 1720.2872641645015 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.13592 - 1 + 1 2.103 20118.1 1.0 5886 3807 9692 DOHH2_400M_050219_1,9695 DOHH2_400M_050219_1,9695, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9698 57.027 367.0 279080.0 25 0 52603.0 + 45557 YVDILPYDY 9 85 1160.5500627535116 1159.5427862869117 1 1160.548144519329 MULTI CID FTMS 0 0 0 9697 185811.171875 0.4546192196580407 8 -0.127197265625 1 Unmodified _YVDILPYDY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 71.13359017698441 0.0206607516130725 1 [YV]D{I|L}{I|L}PY{[YD]|[{M(Oxidation (M))|F}M]} 9 0 + 47.001 0.0 0.0 4.0534 4.0534 73.402 0.0 0.0 0.0 2.498774732165998 9.454321750294667 2.498774732165998 2.498774732165998 0 1.5044321917401078 0.9208187539523752 0.7396518287104438 0.0 + + [YV]D{I|L}{I|L}PY{[YD]|[{M(Oxidation (M))|F}M]};{NN|[MP]|[D{I|L}]|[EV]}VY{I|L}PY{[YD]|[{M(Oxidation (M))|F}M]};{NN|[MP]|[D{I|L}]|[EV]}YV{I|L}PY{[YD]|[{M(Oxidation (M))|F}M]};[YV]EV{I|L}PY{[YD]|[{M(Oxidation (M))|F}M]};[YV]{I|L}D{I|L}PY{[YD]|[{M(Oxidation (M))|F}M]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}YVPY{[YD]|[{M(Oxidation (M))|F}M]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}VYPY{[YD]|[{M(Oxidation (M))|F}M]};{[YD]|[{M(Oxidation (M))|F}M]}V{I|L}{I|L}PY{[YD]|[{M(Oxidation (M))|F}M]};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}YPY{[YD]|[{M(Oxidation (M))|F}M]};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}VPY{[YD]|[{M(Oxidation (M))|F}M]} 4.0534;3.8379;3.6283;3.3246;3.2746;2.8963;2.8963;2.8478;2.7886;2.579 +;-;-;-;-;-;-;-;-;- + 620 1 2.103 65661.7 1.0 5887 3809 9697 DOHH2_400M_050219_1,9698 DOHH2_400M_050219_1,9698,YVDILPYDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9701 57.039 310.0 150300.0 25 0 4845.1 -1 0 77 1046.8818701406074 5229.372968370037 5 1047.478930652142 MULTI CID FTMS 0 0 0 9700 184222.296875 0.5983201179363175 -4 0.0514907836914062 1 1 VPP 3 -1 16.198 0.0 0.0 0.30975 0.0 0.0 2365.022149517394 2568.220383603152 4933.242533120547 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VPP 0.30975 - 20 + 1 2.103 40354.3 1.0 5888 3811 9700 DOHH2_400M_050219_1,9701 DOHH2_400M_050219_1,9701, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9702 57.052 800.0 57714.0 25 0 7119.9 -1 0 83 1113.010668933392 0 1113.010668933392 PEAK CID FTMS 0 0 0 -1 0 2 1 {I|L}AE 3 -1 14.671 0.0 0.0 0.65965 0.0 0.0 1405.6300281970591 502.1946200006469 1907.824648197706 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7134679910804405 0.0 {I|L}AE 0.65965 - 20 + 1 2.103 34499.6 0.6000000238418579 5889 3811 9700 DOHH2_400M_050219_1,9702 DOHH2_400M_050219_1,9702, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9703 57.066 800.0 37011.0 25 0 1605.7 -1 0 71 867.29427753866 0 867.2936889529228 PEAK CID FTMS 0 0 0 9700 61839.12109375 1.0 0 0.0 3 1 {I|L} 1 -1 4.6041 0.0 0.0 0.26574 0.0 0.0 753.0936077122825 863.3750704400999 1616.4686781523824 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.26574 - 4 + 1 2.103 28799.3 0.449999988079071 5890 3811 9700 DOHH2_400M_050219_1,9703 DOHH2_400M_050219_1,9703, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9706 57.083 583.0 280430.0 25 0 32660.0 + 19947 LIDTLLDGY 9 97 1022.5413158246594 1021.5340393580592 1 1022.54356688261 MULTI CID FTMS 0 0 0 9705 219177.125 0.8817407598428154 1 -0.02667236328125 1 Unmodified _LIDTLLDGY_ ENSG00000143612|ENST00000368521|C1orf43;nc|nan|Q9BWL3-2|C1orf43;nc|nan|Q9BWL3-3|C1orf43;nc|nan|Q9BWL3-4|C1orf43;nc|nan|Q9BWL3-5|C1orf43 147.8311659463005 0.0308244065875608 1 [{I|L}T]D{I|L}{I|L}{I|L}DGY 9 2 + 109.92 0.0 0.0 10.761 10.761 89.157 0.0 0.0 0.0 4.361818737241734 16.478174818886373 4.361818737241734 4.361818737241734 0 1.6184151806525389 1.2218487496163564 2.690614065464281 0.0 [{I|L}T]D{I|L}{I|L}{I|L}DGY;{I|L}{I|L}DT{I|L}{I|L}DGY;{I|L}{I|L}TD{I|L}{I|L}DGY;[{I|L}T]D{I|L}{I|L}D{I|L}GY;[{I|L}T]{I|L}D{I|L}{I|L}DGY;{I|L}{I|L}DT{I|L}D{I|L}GY;{I|L}{I|L}TD{I|L}D{I|L}GY;[{I|L}T]D{I|L}{I|L}DG{I|L}Y;[{I|L}T]{I|L}D{I|L}D{I|L}GY;{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{I|L}{I|L}DGY 10.761;10.334;10.285;10.11;10.074;9.6826;9.634;9.4422;9.4228;9.1362 -;+;-;-;-;-;-;-;-;- + 2785 1 2.103 107049.4 1.0 5891 3813 9705 DOHH2_400M_050219_1,9706 DOHH2_400M_050219_1,9706,LIDTLLDGY True True LIDTLLDGY 57.082953 1022.54356688261 1265852.75 9705.0 nc|nan|Q9BWL3-5|C1orf43;;nc|nan|Q9BWL3-2|C1orf43;;nc|nan|Q9BWL3-4|C1orf43;;nc|nan|Q9BWL3-3|C1orf43;;ENSG00000143612|ENST00000368521|C1orf43 7.205887158711751 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9707 57.097 800.0 172470.0 25 0 21394.0 -1 0 91 1186.558460807186 0 1186.552783191204 PEAK CID FTMS 0 0 0 9705 97854.515625 0.7869184118084586 -9 0.1363372802734375 2 1 P[HQ]MGM[{I|L}P]CPPDGA 14 -1 40.013 0.0 0.0 1.6875 0.0 0.0 745.3806430080934 191.0833529108032 936.4639959188966 0.0 0.0 0.0 0.0 0 1.924742501084005 0.0 0.4247425010840047 0.0 P[HQ]MGM[{I|L}P]CPPDGA 1.6875 - 1523 + 1 2.103 87806.1 0.5400000214576721 5892 3813 9705 DOHH2_400M_050219_1,9707 DOHH2_400M_050219_1,9707, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9710 57.117 800.0 127630.0 25 0 9110.7 -1 0 91 1054.8715037063312 0 1054.865771472454 PEAK CID FTMS 0 0 0 9709 48902.34375 0.3557902266053219 -7 0.087188720703125 1 1 Y 1 -1 2.4743 0.0 0.0 0.11739 0.0 0.0 674.0582407116875 1267.5603731744752 1941.6186138861624 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.11739 - 2 + 1 2.103 68862.2 0.550000011920929 5893 3815 9709 DOHH2_400M_050219_1,9710 DOHH2_400M_050219_1,9710, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9711 57.128 651.0 160360.0 25 0 12989.0 + 33823 SLDTEPEEEPL 11 97 629.7879788923207 1257.5614048514412 2 629.7888671755791 MULTI CID FTMS 0 0 0 9709 93151.8828125 0.9559937621769842 -1 0.00384521484375 2 Unmodified _SLDTEPEEEPL_ REV__ENSG00000227507|ENST00000429299|LTB;REV__ENST00000482429.1_1_6:31548488-31549450:-|nuORF;REV__ENST00000483972.1_1_6:31548488-31550294:-|nuORF 18.1463463914782 0.6576820063886638 1 {[TV]|[{I|L}S]}DEV{[MS]|[{M(Oxidation (M))|F}A]}C{I|L}VY 11 -1 + 46.546 0.0 0.0 3.7013 3.7013 72.307 0.0 0.0 0.0 2.9262882720588834 10.3386481375777 2.9262882720588834 2.430380486862944 0 0.8182503180159344 1.6989700043360187 0.9604093769761876 0.0 {[TV]|[{I|L}S]}DEV{[MS]|[{M(Oxidation (M))|F}A]}C{I|L}VY;{[TV]|[{I|L}S]}DD{I|L}{[MS]|[{M(Oxidation (M))|F}A]}C{I|L}VY;{NN|[MP]|[D{I|L}]|[EV]}DTV{[MS]|[{M(Oxidation (M))|F}A]}C{I|L}VY;{NN|[MP]|[D{I|L}]|[EV]}DVT{[MS]|[{M(Oxidation (M))|F}A]}C{I|L}VY;{NN|[MP]|[D{I|L}]|[EV]}DTV{[MS]|[{M(Oxidation (M))|F}A]}DTVY;{[TV]|[{I|L}S]}DE[W{M(Oxidation (M))|F}]TVVY;{[TV]|[{I|L}S]}DEV[W{M(Oxidation (M))|F}]TVY;{NN|[MP]|[D{I|L}]|[EV]}DS{I|L}{[MS]|[{M(Oxidation (M))|F}A]}C{I|L}VY;{NN|[MP]|[D{I|L}]|[EV]}DVT{[MS]|[{M(Oxidation (M))|F}A]}DTVY;{NN|[MP]|[D{I|L}]|[EV]}DS{I|L}{[MS]|[{M(Oxidation (M))|F}A]}DTVY 3.7013;3.508;3.4686;3.3916;3.3286;3.3194;3.2778;3.2754;3.2515;3.1353 -;-;-;-;-;-;-;-;-;- 1228 1 2.103 81056.3 1.0 5894 3815 9709 DOHH2_400M_050219_1,9711 DOHH2_400M_050219_1,9711,SLDTEPEEEPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9712 57.141 705.0 42220.0 25 0 2687.8 7999 EMIPGVSLDQ 10 66 1088.52983650849 1087.52256004189 1 1089.530810534954 MULTI CID FTMS 0 0 0 9709 84315.265625 1.0 0 0.0 3 Unmodified _EMIPGVSLDQ_ ENSG00000184368|ENST00000379643|MAP7D2;nc|ENSG00000184368|Q96T17-4|MAP7D2;nc|ENSG00000184368|Q96T17-5|MAP7D2;nc|ENSG00000184368|Q96T17|MAP7D2 4.897010918128616 0.7039849508293987 1 {I|L}{[QN]|[E{I|L}]|[KN]} 3 8 10.458 0.0 0.0 0.9616 0.0 0.0 714.346971580275 0.0 714.346971580275 0.0 -2.245462655597093 -2.245462655597093 0.0 0 0.0 0.0 0.0 0.0 {I|L}{[QN]|[E{I|L}]|[KN]} 0.9616 - 14 1 2.103 27351.5 1.0 5895 3815 9709 DOHH2_400M_050219_1,9712 DOHH2_400M_050219_1,9712,EMIPGVSLDQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9715 57.156 488.0 63263.0 25 0 1825.8 42119 VRQARVLPL 9 66 1051.674260263415 1050.6669837968147 1 1051.879565417767 MULTI CID FTMS 0 0 0 9714 14451.4921875 0.3097031846023627 1 -0.0389060974121093 1 Unmodified _VRQARVLPL_ ENST00000311177.6_1_17:46699388-46699802:-|nuORF 0.5247636613948944 0.8963649302248013 1 Y 1 9 4.6041 0.0 0.0 0.43821 0.0 0.0 247.2147265720085 637.3724459283811 884.5871725003897 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.43821 - 1 + 1 2.103 30370.4 1.0 5896 3817 9714 DOHH2_400M_050219_1,9715 DOHH2_400M_050219_1,9715,VRQARVLPL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9716 57.17 800.0 163540.0 25 0 12824.0 -1 0 104 1054.6729768744574 5268.328502039287 5 1055.073413074017 MULTI CID FTMS 0 0 0 9714 83258.59375 0.7702463500372182 -3 0.0477218627929687 2 1 E 1 -1 8.9794 0.0 0.0 0.17044 0.0 0.0 2680.066926096201 2456.191809432172 5136.258735528372 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E 0.17044 - 24 + 1 2.103 86561.5 0.5899999737739563 5897 3817 9714 DOHH2_400M_050219_1,9716 DOHH2_400M_050219_1,9716, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9717 57.183 800.0 50377.0 25 0 1764.6 -1 0 78 1198.325976550579 0 1198.325976550579 PEAK CID FTMS 0 0 0 -1 0 3 1 T 1 -1 6.9897 0.0 0.0 0.29189 0.0 0.0 1060.8106922595582 1229.7682589166627 2290.578951176221 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.29189 - 1 + 1 2.103 28061.8 0.5699999928474426 5898 3817 9714 DOHH2_400M_050219_1,9717 DOHH2_400M_050219_1,9717, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9720 57.204 800.0 51778.0 25 0 2749.5 -1 0 93 1106.0151397355864 0 1105.928027331829 PEAK CID FTMS 0 0 0 -1 0 1 1 Q 1 -1 5.4846 0.0 0.0 0.24817 0.0 0.0 1855.860924147151 223.0730379693969 2078.933962116548 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.24817 - 69 + 1 2.103 34769.2 0.5099999904632568 5899 3819 9719 DOHH2_400M_050219_1,9720 DOHH2_400M_050219_1,9720, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9722 57.214 417.0 357840.0 25 0 16879.0 -1 0 109 791.3732727900846 2371.0979889704536 3 791.7079345583916 MULTI CID FTMS 0 0 0 9721 119164.2578125 0.448473973733399 -37 0.5401115417480469 1 1 {[HG]|PP}APPGDC[RN]AGM 13 -1 41.249 0.0 0.0 1.7397 0.0 0.0 0.0 1104.547661051448 1104.547661051448 4.824990919625648 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.7302046884880937 0.3494850021680094 {[HG]|PP}APPGDC[RN]AGM 1.7397 - 14065 1 2.103 110248.8 1.0 5900 3820 9721 DOHH2_400M_050219_1,9722 DOHH2_400M_050219_1,9722, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9723 57.223 516.0 255900.0 25 0 31203.0 + 32760 SEDNRILLW 9 98 573.3009072164474 1144.5872614996947 2 573.3016235232353 MULTI CID FTMS 0 0 0 9721 116967.890625 0.3059489567456274 -7 0.1337165832519531 2 Unmodified _SEDNRILLW_ ENSG00000116455|ENST00000235090|WDR77;nc|ENSG00000116455|Q9BQA1-2|WDR77 66.45667989310934 0.0225072657982126 1 {I|L}{I|L}[RN]{I|L}DC{I|L}{[DA]|[EG]} 10 7 + 44.364 0.0 0.0 3.8759 3.8759 73.728 0.0 0.0 0.0 3.177959224778135 23.99674684468792 3.177959224778135 3.0102999566398125 0 0.9247425010840048 1.0969100130080565 0.3054621874040891 0.6989700043360187 {I|L}{I|L}[RN]{I|L}DC{I|L}{[DA]|[EG]};{I|L}{I|L}[RN]D{I|L}C{I|L}{[DA]|[EG]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KA]EE{I|L}{I|L}W;{I|L}{I|L}[RN]{I|L}DESW;{I|L}{I|L}[RN]D{I|L}ESW;{[MG]|[TS]}[RP]{[VA]|[{I|L}G]}{I|L}C{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}A{[VA]|[{I|L}G]}{I|L}ESW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[Q{I|L}]{I|L}ESW;{[MG]|[TS]}[RP]{[VA]|[{I|L}G]}{I|L}ESW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[C(Carbamidomethyl (C))R]{I|L}{I|L}[DV] 3.8759;3.6129;3.4648;2.9915;2.7285;2.7101;2.187;2.0332;1.0212;0.96912 -;-;-;-;-;-;-;-;-;- 221 1 2.103 100791.6 1.0 5901 3820 9721 DOHH2_400M_050219_1,9723 DOHH2_400M_050219_1,9723,SEDNRILLW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9724 57.237 800.0 10638.0 25 0 754.45 -1 0 26 1036.367236316204 0 1036.367236316204 PEAK CID FTMS 0 0 0 -1 0 3 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 14937.2 0.4600000083446502 5902 3820 9721 DOHH2_400M_050219_1,9724 DOHH2_400M_050219_1,9724, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9726 57.254 781.0 304000.0 25 0 5838.3 -1 0 168 1081.5292108653512 3241.565803196254 3 1081.863574206829 MULTI CID FTMS 0 0 0 9725 327036.03125 0.6373873724353146 4 -0.0989646911621093 1 1 D[MN][PG]ANVMN{I|L} 11 -1 74.086 0.0 0.0 2.2855 0.0 0.0 2067.03243848706 0.0 2067.03243848706 0.0 38.34508891596672 0.0 0.0 0 0.5 0.0 2.1307196863200843 1.579689690656103 D[MN][PG]ANVMN{I|L} 2.2855 - 4057 1 2.103 152792.7 1.0 5903 3821 9725 DOHH2_400M_050219_1,9726 DOHH2_400M_050219_1,9726, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9727 57.265 600.0 161630.0 25 0 92234.0 24106 LYKEVLEA 8 50 964.5332736269654 963.5259971603654 1 964.535693347454 MULTI CID FTMS 0 0 0 9725 117139.6171875 0.3154158653231246 8 -0.1398544311523437 2 Unmodified _LYKEVLEA_ ENSG00000124574|ENST00000372530|ABCC10;ENST00000463024.1_1_6:43406347-43410920:+|nuORF;ENST00000469856.1_1_6:43406485-43409704:+|nuORF;nc|ENSG00000124574|Q5T3U5-2|ABCC10 7.289230182591677 0.7800870086367542 1 {I|L}C 2 7 20.969 0.0 0.0 2.1763 0.0 0.0 0.0 744.4271396741578 744.4271396741578 17.870156338638594 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}C 2.1763 - 4 + 1 2.103 72988.1 1.0 5904 3821 9725 DOHH2_400M_050219_1,9727 DOHH2_400M_050219_1,9727,LYKEVLEA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9728 57.279 800.0 167160.0 25 0 10981.0 + 20361 LLGGVCVALY 10 105 1007.5561691736434 1006.5488927070434 1 1007.552416980267 MULTI CID FTMS 0 0 0 9725 102357.578125 0.0825040175917623 14 -0.194183349609375 3 Unmodified _LLGGVCVALY_ REV__ENSG00000125510|ENST00000336866|OPRL1;REV__nc|ENSG00000125510|P41146-2|OPRL1 40.44857923139169 0.1528301697436547 1 [PA]N{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y 9 -1 + 69.809 0.0 0.0 6.9354 6.9354 81.568 0.0 0.0 0.0 3.732288804757232 16.478174818886373 3.732288804757232 1.3955925013612216 0 0.0 1.6989700043360187 0.0 1.8996498648046136 [PA]N{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y;[PA]N{M(Oxidation (M))|F}{I|L}{I|L}G{I|L}Y;{I|L}{I|L}N{[DS]|[MA]|[CV]|TT}G{I|L}{I|L}Y;[PA]N{I|L}{M(Oxidation (M))|F}G{I|L}{I|L}Y;{I|L}{I|L}N{[DS]|[MA]|[CV]|TT}{I|L}G{I|L}Y;[PA]N{I|L}{M(Oxidation (M))|F}{I|L}G{I|L}Y;[PA]N{I|L}{I|L}{M(Oxidation (M))|F}G{I|L}Y;[PA]N{M(Oxidation (M))|F}G{I|L}{I|L}{I|L}Y;[PA]{M(Oxidation (M))|F}N{I|L}G{I|L}{I|L}Y;{I|L}{I|L}NQM{I|L}{I|L}Y 6.9354;6.7968;6.5646;6.5419;6.426;6.4032;6.3595;6.2858;6.2804;6.2018 -;-;-;-;-;-;-;-;-;- 4811 1 2.103 90930.7 0.4300000071525574 5905 3821 9725 DOHH2_400M_050219_1,9728 DOHH2_400M_050219_1,9728,LLGGVCVALY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9730 57.295 800.0 111270.0 25 0 26515.0 -1 0 98 1160.5386909023994 0 1160.540576159954 PEAK CID FTMS 0 0 0 9729 98665.9921875 0.8352736802137 -7 0.1779823303222656 1 1 A[KS]{I|L}Q 5 -1 11.07 0.0 0.0 0.47735 0.0 0.0 1269.5713260413238 519.1593111627561 1788.7306372040798 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 A[KS]{I|L}Q 0.47735 - 173 + 1 2.103 58631.7 0.4799999892711639 5906 3822 9729 DOHH2_400M_050219_1,9730 DOHH2_400M_050219_1,9730, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9731 57.3 276.0 21557.0 25 0 2351.6 -1 0 19 1106.0151397355864 0 1106.014331042767 PEAK CID FTMS 0 0 0 9729 97771.421875 1.0 0 0.0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 15678.4 1.0 5907 3822 9729 DOHH2_400M_050219_1,9731 DOHH2_400M_050219_1,9731, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9733 57.318 800.0 95596.0 25 0 5686.2 -1 0 109 1046.8818701406074 5229.372968370037 5 1047.087084949017 MULTI CID FTMS 0 0 0 9732 35501.7734375 0.1623042320857438 9 -0.1189651489257812 1 1 YQQ 3 -1 13.984 0.0 0.0 0.26742 0.0 0.0 4422.019038781949 385.1526278131469 4807.171666595096 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 YQQ 0.26742 - 1194 + 1 2.103 53433.8 0.4699999988079071 5908 3823 9732 DOHH2_400M_050219_1,9733 DOHH2_400M_050219_1,9733, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9734 57.332 800.0 24133.0 25 0 2064.1 -1 0 50 1182.9388054311053 0 1183.055468738079 PEAK CID FTMS 0 0 0 9732 44563.2265625 0.7799133208294922 -1 0.0215415954589843 2 1 C 1 -1 3.9794 0.0 0.0 0.16834 0.0 0.0 1272.9633519737356 984.8461397760374 2257.809491749773 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.16834 - 7 + 1 2.103 20034.8 0.4600000083446502 5909 3823 9732 DOHH2_400M_050219_1,9734 DOHH2_400M_050219_1,9734, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9737 57.345 340.0 237500.0 25 0 30249.0 -1 0 61 1186.5545562152215 2371.094559497244 2 1187.060351550579 MULTI CID FTMS 0 0 0 9736 110417.90625 0.4732437568855356 8 -0.087188720703125 1 1 [QP][QT]PPPP{M(Oxidation (M))|F} 9 -1 58.234 0.0 0.0 2.456 0.0 0.0 0.0 1378.5812898041374 1378.5812898041374 30.354093192711183 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.2396518287104437 1.174742501084005 [QP][QT]PPPP{M(Oxidation (M))|F} 2.456 - 523 1 2.103 54713.4 1.0 5910 3825 9736 DOHH2_400M_050219_1,9737 DOHH2_400M_050219_1,9737, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9738 57.352 396.0 210170.0 25 0 11518.0 + -1 YNTIDDLKDQIVDL 14 143 832.9226711434045 1663.830789353609 2 833.4241210818291 MULTI CID FTMS 0 0 0 9736 140070.296875 0.6448905912362204 -7 0.1523513793945312 2 Carbamidomethyl (C),Oxidation (M) _QRC(Carbamidomethyl (C))M(Oxidation (M))RTLWRRW_ ENSG00000171403|ENST00000246662|KRT9;P35527 0.0 0.8751479354844584 1 N[EP]VM[KP]D{I|L} 9 -1 30.212 0.0 0.0 1.8158 0.0 0.0 622.3281993720899 0.0 622.3281993720899 0.0 2.668333131514906 0.0 0.0 0 0.0 0.0 1.610924374808178 0.0 N[EP]VM[KP]D{I|L} 1.8158 - 3928 + 1 2.103 56900.7 1.0 5911 3825 9736 DOHH2_400M_050219_1,9738 DOHH2_400M_050219_1,9738,QRCMRTLWRRW False False YNTIDDLKDQIVDL 57.351684 832.9231 1171432.375 9736.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 5.702104568481445 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9739 57.365 745.0 103310.0 25 0 7045.5 -1 0 125 858.9148912861614 1715.815229639123 2 859.4158813357353 MULTI CID FTMS 0 0 0 9736 86971.484375 0.771783853793848 -4 0.0989646911621093 3 1 {[QN]|[E{I|L}]|[KN]}Y 3 -1 12.932 0.0 0.0 0.75368 0.0 0.0 0.0 1307.6002692721884 1307.6002692721884 0.4575749056067497 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[QN]|[E{I|L}]|[KN]}Y 0.75368 - 259 1 2.103 52098.6 1.0 5912 3825 9736 DOHH2_400M_050219_1,9739 DOHH2_400M_050219_1,9739, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9744 57.393 800.0 84479.0 25 0 11823.0 -1 0 83 1089.4669652738737 0 1089.472582995892 PEAK CID FTMS 0 0 0 -1 0 1 1 Y{I|L}{I|L} 3 -1 9.2082 0.0 0.0 0.42299 0.0 0.0 1186.4282409952095 598.2364596002561 1784.6647005954655 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}{I|L} 0.42299 - 48 + 1 2.103 47833.7 0.4600000083446502 5913 3829 9743 DOHH2_400M_050219_1,9744 DOHH2_400M_050219_1,9744, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9745 57.399 330.0 17300.0 25 0 1313.4 -1 0 19 1074.881762683392 0 1074.881762683392 PEAK CID FTMS 0 0 0 -1 0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 12183.7 1.0 5914 3829 9743 DOHH2_400M_050219_1,9745 DOHH2_400M_050219_1,9745, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9748 57.419 781.0 86035.0 25 0 10875.0 + 45256 YSDEFGNLDF 10 97 603.7510910183759 1205.4876291035516 2 603.7515136599541 MULTI CID FTMS 0 0 0 9747 59044.8359375 0.5528511146428091 -3 0.0304107666015625 1 Unmodified _YSDEFGNLDF_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 62.57269311338072 0.0298375429882549 1 NG{M(Oxidation (M))|F}ED[MT] 7 9 35.327 0.0 0.0 2.9305 0.0 0.0 393.1887535168744 0.0 393.1887535168744 0.0 13.310428583697806 0.0 0.0 0 0.2742275032520141 0.0 0.9163865622122672 0.4247425010840047 NG{M(Oxidation (M))|F}ED[MT] 2.9305 - 434 + 1 2.103 51509.9 1.0 5915 3831 9747 DOHH2_400M_050219_1,9748 DOHH2_400M_050219_1,9748,YSDEFGNLDF True True YSDEFGNLDF 57.419167 603.751513659954 457617.0625 9747.0 ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;nc|ENSG00000125885|Q9UJA3-2|MCM8 7.152255058288574 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9753 57.447 800.0 38352.0 25 0 2036.3 -1 0 71 1018.0379314319088 0 1018.060534656048 PEAK CID FTMS 0 0 0 9752 38322.21484375 0.496556820185708 1 -0.0283279418945312 1 1 C(Carbamidomethyl (C)) 1 -1 5.4846 0.0 0.0 0.26964 0.0 0.0 1060.6130810261238 810.3999117486936 1871.0129927748176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.26964 - 7 + 1 2.103 25936.6 0.9900000095367432 5916 3835 9752 DOHH2_400M_050219_1,9753 DOHH2_400M_050219_1,9753, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9754 57.459 685.0 19858.0 25 0 1966.2 -1 0 38 1108.6948310279795 0 1108.206103503704 PEAK CID FTMS 0 0 0 9752 47812.0703125 1.0 0 0.0 2 1 E 1 -1 5.4846 0.0 0.0 0.24757 0.0 0.0 1475.7508548276408 607.5593966119749 2083.3102514396155 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.24757 - 3 + 1 2.103 18436.1 1.0 5917 3835 9752 DOHH2_400M_050219_1,9754 DOHH2_400M_050219_1,9754, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9757 57.471 212.0 411910.0 25 0 24053.0 -1 0 89 791.3732727900846 2371.0979889704536 3 791.7086669802666 MULTI CID FTMS 0 0 0 9756 187859.421875 0.7070078140721041 -20 0.3187980651855469 1 1 PPPPPP{[QN]|[E{I|L}]|[KN]} 8 -1 39.391 0.0 0.0 1.6613 0.0 0.0 1528.6691104516403 0.0 1528.6691104516403 0.0 0.9035613627073076 0.0 0.0 0 0.0 0.0 0.2614393726401688 1.642159058960253 PPPPPP{[QN]|[E{I|L}]|[KN]} 1.6613 - 4323 + 1 2.103 67652.1 1.0 5918 3837 9756 DOHH2_400M_050219_1,9757 DOHH2_400M_050219_1,9757, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9758 57.478 347.0 230410.0 25 0 30818.0 + 32761 SEDNRILLW 9 66 573.3009072164474 1144.5872614996947 2 573.3014404177666 MULTI CID FTMS 0 0 0 9756 156901.8125 0.4104027660016036 10 -0.1477851867675781 2 Unmodified _SEDNRILLW_ ENSG00000116455|ENST00000235090|WDR77;nc|ENSG00000116455|Q9BQA1-2|WDR77 29.84058131909904 0.1515068451768857 1 {I|L}{I|L}{I|L}W 4 5 41.186 0.0 0.0 3.5983 0.0 0.0 601.246271482919 0.0 601.246271482919 0.0 18.96713777483761 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {I|L}{I|L}{I|L}W 3.5983 + + 67 1 2.103 64886.0 1.0 5919 3837 9756 DOHH2_400M_050219_1,9758 DOHH2_400M_050219_1,9758,SEDNRILLW False True SEDNRILLW 57.477567 573.301440417767 4312325.0 9756.0 ENSG00000116455|ENST00000235090|WDR77;;nc|ENSG00000116455|Q9BQA1-2|WDR77 6.911643346150716 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9759 57.491 800.0 67676.0 25 0 2757.0 -1 0 97 1198.054786330434 2394.095019727668 2 1198.555834949017 MULTI CID FTMS 0 0 0 9756 87870.5 0.9483869134453968 1 -0.028076171875 3 1 C(Carbamidomethyl (C)) 1 -1 4.6041 0.0 0.0 0.19231 0.0 0.0 1391.6493542997366 839.4092501275999 2231.0586044273364 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.19231 - 104 + 1 2.103 36046.4 0.5099999904632568 5920 3837 9756 DOHH2_400M_050219_1,9759 DOHH2_400M_050219_1,9759, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9762 57.506 470.0 238210.0 25 0 19799.0 + 33111 SESPIVVVL 9 98 942.5506907600015 941.5434142934016 1 942.5502197146416 MULTI CID FTMS 0 0 0 9761 171585.0 0.0344356100151361 28 -0.6182632446289062 1 Unmodified _SESPIVVVL_ ENSG00000140612|ENST00000268220|SEC11A;ENSG00000166562|ENST00000587834|SEC11C;ENST00000585864.1_1_18:56807180-56819918:+|nuORF;nc|ENSG00000140612|P67812-2|SEC11A;nc|ENSG00000140612|P67812-3|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A 77.98433622928108 0.0180125044636492 1 [{I|L}P]VSESVV{I|L} 9 6 + 84.364 0.0 0.0 8.9601 8.9601 86.073 0.0 0.0 0.0 22.37643016799588 67.2678938596494 22.37643016799588 2.5004522958635533 0 0.3807196863200844 1.5228787452803376 1.8494850021680087 0.0 [{I|L}P]VSESVV{I|L};[{I|L}P]VSVESV{I|L};[{I|L}P]VVSESV{I|L};[{I|L}P]SVESVV{I|L};[{I|L}P]SVVESV{I|L};[{I|L}P]VSEVSV{I|L};[{I|L}P]S{[ES]|[DT]|[{I|L}C]}VVV{I|L};[{I|L}P]SVEVSV{I|L};[{I|L}P]VSVVES{I|L};[{I|L}P]VVSVES{I|L} 8.9601;8.6946;8.6688;8.6404;8.3748;7.8891;7.862;7.5694;6.8902;6.8644 -;-;-;-;-;-;-;-;-;- 961 1 2.103 77999.6 1.0 5921 3839 9761 DOHH2_400M_050219_1,9762 DOHH2_400M_050219_1,9762,SESPIVVVL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9763 57.51 189.0 33552.0 25 0 3681.4 -1 0 18 1116.353230026058 0 1116.558032214642 PEAK CID FTMS 0 0 0 -1 0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 16950.7 1.0 5922 3839 9761 DOHH2_400M_050219_1,9763 DOHH2_400M_050219_1,9763, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9766 57.526 528.0 50414.0 25 0 3516.8 -1 0 68 864.1963350369716 0 864.2448608279228 PEAK CID FTMS 0 0 0 9765 8841.53125 0.2806160920155846 1 -0.0206069946289062 1 1 R 1 -1 3.9794 0.0 0.0 0.23051 0.0 0.0 920.5534844276556 646.6834200494749 1567.2369044771306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.23051 - 4 + 1 2.103 25566.1 1.0 5923 3841 9765 DOHH2_400M_050219_1,9766 DOHH2_400M_050219_1,9766, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9767 57.534 494.0 156900.0 25 0 10487.0 + + 2832 GIYEALEL 8 97 907.4773723866854 906.4700959200852 1 907.4716064333916 MULTI CID FTMS 0 0 0 9765 77781.1015625 0.5826053580835361 4 -0.070404052734375 2 Unmodified _AVAELYEI_ ENSG00000108515|ENST00000519602|ENO3;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;ENST00000537838.5_1_12:7024996-7025840:+|nuORF;nc|ENSG00000111674|P09104-2|ENO2;nc|ENSG00000108515|P13929-2|ENO3;ENST00000539713.5_1_12:7024996-7026336:+|nuORF;ENST00000486051.5_1_1:8930279-8934967:-|nuORF;ENSG00000111674|ENST00000229277|ENO2;ENST00000492343.1_1_1:8931941-8934967:-|nuORF;ENSG00000074800|ENST00000234590|ENO1;nc|ENSG00000108515|P13929-3|ENO3;ENST00000519834.5_1_17:4855124-4857242:+|nuORF 63.562846038646086 0.116059504757595 1 [YE]AVA{I|L}E{I|L} 8 -1 + 64.696 0.0 0.0 7.1372 7.1372 87.564 0.0 0.0 0.0 10.082661386204292 16.409780573583326 10.082661386204292 6.375918373824817 0 0.6203715150305281 0.0 1.0356668758921828 0.0 [YE]AVA{I|L}E{I|L};[YE]A{I|L}G{I|L}E{I|L};[YE]AG{I|L}{I|L}E{I|L};[YE]AVAE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}QY{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}AGY{I|L}E{I|L};[YE]Q{I|L}{I|L}E{I|L};[Q{I|L}]EY{I|L}E{I|L};[Y{I|L}]GEA{I|L}E{I|L};[YE]A{I|L}GE{I|L}{I|L} 7.1372;6.4338;6.4338;6.1564;6.0249;5.9609;5.7267;5.6928;5.6146;5.453 -;-;-;-;-;-;-;-;-;- 956 1 2.103 58493.2 1.0 5924 3841 9765 DOHH2_400M_050219_1,9767 DOHH2_400M_050219_1,9767,AVAELYEI False False GIYEALEL 57.534471 907.471606433392 701185.5625 9765.0 ENSG00000108515|ENST00000519602|ENO3;;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;;ENST00000537838.5_1_12:7024996-7025840:+|nuORF;;nc|ENSG00000111674|P09104-2|ENO2;;nc|ENSG00000108515|P13929-2|ENO3;;ENST00000539713.5_1_12:7024996-7026336:+|nuORF;;ENST00000486051.5_1_1:8930279-8934967:-|nuORF;;ENSG00000111674|ENST00000229277|ENO2;;ENST00000492343.1_1_1:8931941-8934967:-|nuORF;;ENSG00000074800|ENST00000234590|ENO1;;nc|ENSG00000108515|P13929-3|ENO3;;ENST00000519834.5_1_17:4855124-4857242:+|nuORF 3.994388739267985 1.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9771 57.559 800.0 65089.0 25 0 6224.9 -1 0 98 1178.0485926861477 7062.247897317286 6 1178.270312488079 MULTI CID FTMS 0 0 0 -1 0 1 1 Q 1 -1 5.4846 0.0 0.0 0.07766 0.0 0.0 5452.024705033886 1479.1055391901002 6931.130244223986 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.07766 - 59 + 1 2.103 38952.1 0.5600000023841858 5925 3844 9770 DOHH2_400M_050219_1,9771 DOHH2_400M_050219_1,9771, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9772 57.571 699.0 175230.0 25 0 17830.0 + 25465 NEILGSLRW 9 107 544.2978678522306 1086.5811827712612 2 544.2977783083916 MULTI CID FTMS 0 0 0 9770 95087.40625 0.856280910957377 -2 0.0078506469726562 2 Unmodified _NEILGSLRW_ ENSG00000112159|ENST00000369393|MDN1 63.960520009940105 0.0238892913700936 1 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}GS{I|L}RW 9 0 + 58.525 0.0 0.0 5.3861 5.3861 90.998 0.0 0.0 0.0 41.403319064628974 7.999906789969572 7.999906789969572 58.52475959235839 0 1.2887254899964358 0.0 0.0 1.110924374808178 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}GS{I|L}RW 5.3861 + + 162 + 1 2.103 93990.2 1.0 5926 3844 9770 DOHH2_400M_050219_1,9772 DOHH2_400M_050219_1,9772,NEILGSLRW True True NEILGSLRW 57.570874 544.297778308392 451808.625 9770.0 ENSG00000112159|ENST00000369393|MDN1 5.158493200937907 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9773 57.578 402.0 332260.0 25 0 15323.0 + 2785 ATSLVMLV 8 123 833.4805021651937 832.4732256985936 1 833.4807006716728 MULTI CID FTMS 0 0 0 9770 272845.3125 1.0 0 0.0 3 Unmodified _ATSLVMLV_ REV__ENSG00000160318|ENST00000291715|CLDND2 59.79521254764295 0.1151759508933577 1 {[DS]|[MA]|[CV]|TT}G{I|L}VMV{I|L} 8 -1 + 68.376 0.0 0.0 8.2136 8.2136 91.723 0.0 0.0 0.0 9.157555908203896 16.409780573583326 9.157555908203896 9.157555908203896 0 0.9386218330464624 0.0 2.2614393726401687 0.0 {[DS]|[MA]|[CV]|TT}G{I|L}VMV{I|L};{[TV]|[{I|L}S]}ATVMV{I|L};{[DS]|[MA]|[CV]|TT}GV{I|L}MV{I|L};{[DS]|[MA]|[CV]|TT}G{I|L}VVM{I|L};{[DS]|[MA]|[CV]|TT}G{I|L}MVV{I|L};{[VA]|[{I|L}G]}TTVMV{I|L};{[TV]|[{I|L}S]}AVTMV{I|L};{[VA]|[{I|L}G]}TVTMV{I|L};{[TV]|[{I|L}S]}AS{I|L}MV{I|L};{[TV]|[{I|L}S]}ATVVM{I|L} 8.2136;7.1135;6.8339;6.7411;6.7157;6.6905;6.1759;5.7528;5.7338;5.6411 -;-;-;-;-;-;-;-;-;- 1185 1 2.103 92445.3 1.0 5927 3844 9770 DOHH2_400M_050219_1,9773 DOHH2_400M_050219_1,9773,ATSLVMLV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9774 57.584 339.0 38989.0 25 0 4190.4 -1 0 27 1194.864428699017 0 1194.864428699017 PEAK CID FTMS 0 0 0 -1 0 4 1 PPPP 4 -1 18.928 0.0 0.0 0.79272 0.0 0.0 1545.2851073031582 451.1951082818969 1996.480215585055 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPP 0.79272 - 32 + 1 2.103 13481.5 1.0 5928 3844 9770 DOHH2_400M_050219_1,9774 DOHH2_400M_050219_1,9774, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9777 57.605 800.0 221000.0 25 0 28168.0 -1 0 115 1186.5545562152215 2371.094559497244 2 1186.552661120892 MULTI CID FTMS 0 0 0 9776 136758.59375 0.6862346775119221 -5 0.0742568969726562 1 1 APPPPPP{[QN]|[E{I|L}]|[KN]} 9 -1 82.075 0.0 0.0 3.4615 0.0 0.0 1457.6274707294683 0.0 1457.6274707294683 0.0 15.609336272793016 0.0 0.0 0 1.305462187404089 0.0 1.135151878060192 2.1549471895720984 APPPPPP{[QN]|[E{I|L}]|[KN]} 3.4615 - 37444 + 1 2.103 108741.7 0.6499999761581421 5929 3846 9776 DOHH2_400M_050219_1,9777 DOHH2_400M_050219_1,9777, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9778 57.611 371.0 38627.0 25 0 1574.7 -1 0 43 1149.237475574017 0 1149.237475574017 PEAK CID FTMS 0 0 0 -1 0 2 1 V 1 -1 0.3786 0.0 0.0 0.016486 0.0 0.0 1419.7775501697154 774.5880831354124 2194.365633305128 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.016486 - 1 + 1 2.103 15783.3 1.0 5930 3846 9776 DOHH2_400M_050219_1,9778 DOHH2_400M_050219_1,9778, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9781 57.631 800.0 61600.0 25 0 1931.2 -1 0 89 1075.5242768639228 3223.5510011919687 3 1076.194750964642 MULTI CID FTMS 0 0 0 9780 62499.03515625 0.5678963184204061 1 -0.016357421875 1 1 E 1 -1 8.0989 0.0 0.0 0.25124 0.0 0.0 2280.0941663304434 811.3989962213499 3091.4931625517934 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 E 0.25124 - 55 + 1 2.103 37431.9 0.6299999952316284 5931 3848 9780 DOHH2_400M_050219_1,9781 DOHH2_400M_050219_1,9781, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9785 57.656 800.0 30491.0 25 0 1937.7 -1 0 57 1182.776416003704 0 1182.776416003704 PEAK CID FTMS 0 0 0 -1 0 1 1 V 1 -1 5.4846 0.0 0.0 0.23205 0.0 0.0 1574.1459583728397 687.3148897760374 2261.4608481488767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.23205 - 1 + 1 2.103 25215.8 0.6700000166893005 5932 3851 9784 DOHH2_400M_050219_1,9785 DOHH2_400M_050219_1,9785, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9786 57.669 800.0 61354.0 25 0 24376.0 -1 0 66 1088.3521573527855 0 1088.411547839642 PEAK CID FTMS 0 0 0 9784 15765.61328125 0.3384579221687084 1 -0.0301399230957031 2 1 E 1 -1 6.9897 0.0 0.0 0.32141 0.0 0.0 1817.5524459538149 225.0714815729125 2042.623927526728 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.32141 - 28 + 1 2.103 39173.8 0.699999988079071 5933 3851 9784 DOHH2_400M_050219_1,9786 DOHH2_400M_050219_1,9786, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9788 57.68 476.0 25331.0 25 0 1345.0 -1 0 38 997.9218627810478 0 997.9218627810478 PEAK CID FTMS 0 0 0 -1 0 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 21499.8 1.0 5934 3852 9787 DOHH2_400M_050219_1,9788 DOHH2_400M_050219_1,9788, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9789 57.688 452.0 60971.0 25 0 3813.3 -1 0 74 982.1745483279228 0 982.1745483279228 PEAK CID FTMS 0 0 0 -1 0 2 1 A 1 -1 4.6041 0.0 0.0 0.23462 0.0 0.0 1756.2283710925658 132.0459383600219 1888.274309452588 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.23462 - 7 + 1 2.103 28289.7 1.0 5935 3852 9787 DOHH2_400M_050219_1,9789 DOHH2_400M_050219_1,9789, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9790 57.697 484.0 96690.0 25 0 1407.8 -1 0 92 894.2922851443291 0 894.2922851443291 PEAK CID FTMS 0 0 0 -1 0 3 1 DG 2 -1 5.5732 0.0 0.0 0.31195 0.0 0.0 1389.4125904529174 222.0886629693969 1611.5012534223142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DG 0.31195 - 10 + 1 2.103 36747.2 1.0 5936 3852 9787 DOHH2_400M_050219_1,9790 DOHH2_400M_050219_1,9790, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9793 57.717 800.0 82444.0 25 0 1337.1 -1 0 104 1149.695361316204 0 1149.695361316204 PEAK CID FTMS 0 0 0 -1 0 1 1 E 1 -1 3.0989 0.0 0.0 0.13489 0.0 0.0 1235.8700184314332 929.4653414361936 2165.3353598676267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.13489 - 4 + 1 2.103 42772.6 0.7900000214576721 5937 3854 9792 DOHH2_400M_050219_1,9793 DOHH2_400M_050219_1,9793, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9794 57.731 800.0 188580.0 25 0 18896.0 + 30507 REFWPQEVW 9 83 638.808664606158 1275.602776279116 2 638.8082153201103 MULTI CID FTMS 0 0 0 9792 93623.765625 0.6611723826684925 -2 0.0311050415039062 2 Unmodified _REFWPQEVW_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 34.221707139014875 0.1071766711162635 1 [QP]E[R{M(Oxidation (M))|F}]WEVW 9 5 + 68.011 0.0 0.0 5.3317 5.3317 76.808 0.0 0.0 0.0 1.7584620548888097 2.8168798831481183 1.7584620548888097 1.7584620548888097 0 1.424742501084005 1.0 0.0 1.1421590589602533 [QP]E[R{M(Oxidation (M))|F}]WEVW;{[RE]|[WV]}{M(Oxidation (M))|F}WPQEVW;[QP]EV[YV]QEV{[DA]|[EG]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PV[YV]QEVW;{[TV]|[{I|L}S]}MTWPQEVW;[QP]TV[MT]WEVW;[QP]EVHPQEV[DV];[QP]EVHPQQQW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P[R{M(Oxidation (M))|F}]WEVW;[MT]VTQP[WE]VW 5.3317;5.1938;5.1108;5.0453;4.6982;4.6136;4.6134;4.6044;4.5477;4.5309 -;+;-;-;-;-;-;-;-;- + 732 1 2.103 112513.5 0.4600000083446502 5938 3854 9792 DOHH2_400M_050219_1,9794 DOHH2_400M_050219_1,9794,REFWPQEVW True True REFWPQEVW 57.730592 638.80821532011 844026.75 9792.0 nc|ENSG00000079459|P37268-4|FDFT1;;nc|ENSG00000079459|P37268-3|FDFT1;;nc|ENSG00000079459|P37268-5|FDFT1;;ENSG00000079459|ENST00000220584|FDFT1;;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;;nc|ENSG00000079459|P37268-2|FDFT1 8.631608486175537 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9795 57.735 207.0 59646.0 25 0 4663.0 -1 0 35 1093.565088767912 0 1093.326342761517 PEAK CID FTMS 0 0 0 -1 0 3 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 19188.9 1.0 5939 3854 9792 DOHH2_400M_050219_1,9795 DOHH2_400M_050219_1,9795, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9796 57.741 344.0 27362.0 25 0 2465.7 -1 0 29 1095.9069324200138 0 1095.625659167767 PEAK CID FTMS 0 0 0 -1 0 4 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.103 18632.9 1.0 5940 3854 9792 DOHH2_400M_050219_1,9796 DOHH2_400M_050219_1,9796, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9797 57.755 800.0 77446.0 25 0 8993.9 -1 0 94 1185.676318347454 0 1185.676318347454 PEAK CID FTMS 0 0 0 -1 0 5 1 APPPPP 6 -1 25.939 0.0 0.0 1.0948 0.0 0.0 1455.869469115027 354.1424959772094 1810.0119650922363 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 APPPPP 1.0948 - 299 + 1 2.103 42638.4 0.8399999737739563 5941 3854 9792 DOHH2_400M_050219_1,9797 DOHH2_400M_050219_1,9797, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9798 57.765 609.0 72111.0 25 0 4833.4 -1 0 106 789.0452026852347 0 788.7824584841728 PEAK CID FTMS 0 0 0 -1 0 6 1 A 1 -1 5.4846 0.0 0.0 0.34799 0.0 0.0 1369.9701528296505 132.04598413638908 1502.0161369660395 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.34799 - 12 + 1 2.103 38444.3 1.0 5942 3854 9792 DOHH2_400M_050219_1,9798 DOHH2_400M_050219_1,9798, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9800 57.776 380.0 379120.0 25 0 16288.0 -1 0 122 791.3732727900846 2371.0979889704536 3 791.7077514529228 MULTI CID FTMS 0 0 0 9799 90849.0625 0.3419099050105866 -2 0.06829833984375 1 1 PPPPPP{[QN]|[E{I|L}]|[KN]} 8 -1 46.064 0.0 0.0 1.9427 0.0 0.0 1528.6677250745158 0.0 1528.6677250745158 0.0 -4.070292222412263 -4.070292222412263 0.0 0 0.5 0.0 0.4698565171985375 1.9812958898387063 PPPPPP{[QN]|[E{I|L}]|[KN]} 1.9427 - 13803 + 1 2.113 103890.5 1.0 5943 3855 9799 DOHH2_400M_050219_1,9800 DOHH2_400M_050219_1,9800, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9801 57.784 453.0 31882.0 25 0 1786.7 -1 0 40 1031.860522449017 0 1031.860522449017 PEAK CID FTMS 0 0 0 -1 0 2 1 V 1 -1 6.9897 0.0 0.0 0.33902 0.0 0.0 931.1093983142468 1028.5303438776002 1959.6397421918468 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.33902 - 2 + 1 2.113 19312.1 1.0 5944 3855 9799 DOHH2_400M_050219_1,9801 DOHH2_400M_050219_1,9801, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9802 57.791 413.0 58395.0 25 0 1984.5 -1 0 66 1015.550707995892 0 1015.550707995892 PEAK CID FTMS 0 0 0 -1 0 3 1 M 1 -1 3.4949 0.0 0.0 0.17224 0.0 0.0 1014.6297230212778 880.4162691705686 1895.0459921918464 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.17224 - 5 + 1 2.113 22958.8 1.0 5945 3855 9799 DOHH2_400M_050219_1,9802 DOHH2_400M_050219_1,9802, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9803 57.802 598.0 371450.0 25 0 18900.0 -1 0 227 805.2542602419853 0 805.2542602419853 PEAK CID FTMS 0 0 0 -1 0 4 1 PW[DV]QGY{M(Oxidation (M))|F} 8 -1 10.126 0.0 0.0 0.62952 0.0 0.0 480.99929089237054 132.04598413638908 613.0452750287596 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 PW[DV]QGY{M(Oxidation (M))|F} 0.62952 - 1949 + 1 2.113 144281.6 1.0 5946 3855 9799 DOHH2_400M_050219_1,9803 DOHH2_400M_050219_1,9803, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9806 57.818 606.0 63766.0 25 0 1385.3 -1 0 86 1133.475857096253 0 1133.408984363079 PEAK CID FTMS 0 0 0 -1 0 1 1 S 1 -1 1.9897 0.0 0.0 0.087848 0.0 0.0 1467.8430583313757 707.0531099908811 2174.8961683222565 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.087848 - 12 + 1 2.113 30197.5 1.0 5947 3857 9805 DOHH2_400M_050219_1,9806 DOHH2_400M_050219_1,9806, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9807 57.82 89.0 226180.0 25 0 21762.0 -1 0 55 927.6489954517144 0 928.0663940310478 PEAK CID FTMS 0 0 0 9805 87207.921875 1.0 0 0.0 2 1 G 1 -1 3.0989 0.0 0.0 0.16721 0.0 0.0 839.1419107258913 954.086557256506 1793.2284679823974 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.16721 - 3 + 1 2.113 18884.8 1.0 5948 3857 9805 DOHH2_400M_050219_1,9807 DOHH2_400M_050219_1,9807, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9808 57.83 544.0 92411.0 25 0 10723.0 -1 0 92 1050.4778136952066 0 1050.234301745892 PEAK CID FTMS 0 0 0 9805 72638.5546875 0.5849233073102776 -3 0.1046104431152343 3 1 E 1 -1 6.9897 0.0 0.0 0.33301 0.0 0.0 1744.7863035669736 222.0891207330688 1966.8754243000424 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.33301 - 23 + 1 2.113 40355.3 1.0 5949 3857 9805 DOHH2_400M_050219_1,9808 DOHH2_400M_050219_1,9808, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9809 57.832 82.0 139320.0 25 0 9410.6 -1 0 35 1069.466479480267 0 1069.466479480267 PEAK CID FTMS 0 0 0 -1 0 4 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.113 18123.1 1.0 5950 3857 9805 DOHH2_400M_050219_1,9809 DOHH2_400M_050219_1,9809, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9810 57.834 98.0 176000.0 25 0 8529.1 -1 0 51 1080.4011153804036 0 1080.458056628704 PEAK CID FTMS 0 0 0 -1 0 5 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.113 20523.7 1.0 5951 3857 9805 DOHH2_400M_050219_1,9810 DOHH2_400M_050219_1,9810, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9811 57.837 192.0 254570.0 25 0 15431.0 -1 0 110 908.3996459841728 0 908.3996459841728 PEAK CID FTMS 0 0 0 -1 0 6 1 A 1 -1 5.4846 0.0 0.0 0.30221 0.0 0.0 1608.678841063269 132.0458925836547 1740.7247336469236 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.30221 - 33 + 1 2.113 35589.2 1.0 5952 3857 9805 DOHH2_400M_050219_1,9811 DOHH2_400M_050219_1,9811, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9812 57.851 800.0 120720.0 25 0 1890.2 -1 0 134 785.6014282107353 0 785.6014282107353 PEAK CID FTMS 0 0 0 -1 0 7 1 E 1 -1 2.4743 0.0 0.0 0.15768 0.0 0.0 557.8598255603393 879.2688082330686 1437.128633793408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15768 - 17 + 1 2.113 71952.4 0.9800000190734864 5953 3857 9805 DOHH2_400M_050219_1,9812 DOHH2_400M_050219_1,9812, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9814 57.863 452.0 163350.0 25 0 7271.6 + -1 SESPIVVVL 9 122 942.605769622068 0 942.6017333865166 PEAK CID FTMS 0 0 0 -1 0 1 ENSG00000140612|ENST00000268220|SEC11A;nc|ENSG00000140612|P67812-3|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A;ENSG00000166562|ENST00000587834|SEC11C;nc|ENSG00000140612|P67812-2|SEC11A;ENST00000585864.1_1_18:56807180-56819918:+|nuORF 1 VV{[ES]|[DT]|[{I|L}C]}SV 6 -1 23.391 0.0 0.0 1.2421 0.0 0.0 1072.7482668485225 207.11448084049064 1279.862747689013 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0994850021680094 0.0 VV{[ES]|[DT]|[{I|L}C]}SV 1.2421 - 445 + 1 2.122 51230.0 1.0 5954 3858 9813 DOHH2_400M_050219_1,9814 DOHH2_400M_050219_1,9814, False False SESPIVVVL 57.862727 942.601733386517 36242904.0 9813.0 ENSG00000140612|ENST00000268220|SEC11A;;nc|ENSG00000140612|P67812-3|SEC11A;;nc|ENSG00000140612|P67812-4|SEC11A;;ENSG00000166562|ENST00000587834|SEC11C;;nc|ENSG00000140612|P67812-2|SEC11A;;ENST00000585864.1_1_18:56807180-56819918:+|nuORF 6.069345474243164 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9815 57.865 108.0 191920.0 25 0 5206.4 -1 0 61 1079.8413516036155 0 1080.014208972454 PEAK CID FTMS 0 0 0 9813 68481.0859375 0.4284589703215102 -2 0.0496139526367187 2 1 R 1 -1 1.7827 0.0 0.0 0.082623 0.0 0.0 1185.942028303131 812.6096285455686 1998.5516568487 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.082623 - 5 + 1 2.122 23408.9 1.0 5955 3858 9813 DOHH2_400M_050219_1,9815 DOHH2_400M_050219_1,9815, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9816 57.869 219.0 260260.0 25 0 9592.3 -1 0 107 983.1087296968394 0 982.9485351443292 PEAK CID FTMS 0 0 0 -1 0 3 1 A 1 -1 4.6041 0.0 0.0 0.2344 0.0 0.0 1758.0965812425084 132.04587732486564 1890.142458567374 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.2344 - 29 + 1 2.122 40567.9 1.0 5956 3858 9813 DOHH2_400M_050219_1,9816 DOHH2_400M_050219_1,9816, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9819 57.883 448.0 243100.0 25 0 14881.0 -1 0 179 826.2050449638249 0 825.8244506716728 PEAK CID FTMS 0 0 0 9818 24188.1015625 0.7406551429397775 -2 0.021697998046875 1 1 G 1 -1 6.9897 0.0 0.0 0.42352 0.0 0.0 1245.2298703458152 345.12107263736567 1590.3509429831809 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.42352 - 60 + 1 2.122 76250.4 1.0 5957 3860 9818 DOHH2_400M_050219_1,9819 DOHH2_400M_050219_1,9819, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9820 57.885 67.0 421040.0 25 0 25209.0 -1 0 77 945.7711990480534 0 945.9422485232352 PEAK CID FTMS 0 0 0 9818 50869.49609375 1.0 0 0.0 2 1 A 1 -1 3.0989 0.0 0.0 0.16401 0.0 0.0 1683.4216420152488 132.04609094791252 1815.467732963161 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.16401 - 3 + 1 2.122 25268.6 1.0 5958 3860 9818 DOHH2_400M_050219_1,9820 DOHH2_400M_050219_1,9820, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9821 57.894 543.0 76384.0 25 0 1347.8 -1 0 88 1185.517000749027 0 1185.355639636517 PEAK CID FTMS 0 0 0 9818 64037.2421875 0.8873990943226929 -1 0.0037879943847656 3 1 S 1 -1 5.4846 0.0 0.0 0.23151 0.0 0.0 1057.3400795236414 1221.6292208307252 2278.9693003543666 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.23151 - 5 + 1 2.122 32025.0 1.0 5959 3860 9818 DOHH2_400M_050219_1,9821 DOHH2_400M_050219_1,9821, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9822 57.899 265.0 134520.0 25 0 3283.4 -1 0 72 958.0868522301142 0 958.1866332888604 PEAK CID FTMS 0 0 0 -1 0 4 1 {M(Oxidation (M))|F} 1 -1 3.4949 0.0 0.0 0.18258 0.0 0.0 1200.7410129545658 563.3593844049436 1764.100397359509 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.18258 - 3 + 1 2.122 32751.1 1.0 5960 3860 9818 DOHH2_400M_050219_1,9822 DOHH2_400M_050219_1,9822, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9823 57.901 59.0 625150.0 25 0 39030.0 -1 0 90 842.0721567498063 0 842.0914184451103 PEAK CID FTMS 0 0 0 -1 0 5 1 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.41553 0.0 0.0 1399.996076339653 132.04584680728752 1532.0419231469405 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.41553 - 14 + 1 2.122 32298.5 1.0 5961 3860 9818 DOHH2_400M_050219_1,9823 DOHH2_400M_050219_1,9823, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9825 57.916 800.0 261680.0 25 0 13949.0 -1 0 223 811.2693982826099 0 811.3868896365166 PEAK CID FTMS 0 0 0 -1 0 1 1 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.43132 0.0 0.0 1338.390223711901 132.04609094791252 1470.4363146598134 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.43132 - 442 + 1 2.122 134924.8 0.8999999761581421 5962 3861 9824 DOHH2_400M_050219_1,9825 DOHH2_400M_050219_1,9825, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9826 57.922 307.0 587080.0 25 0 31207.0 -1 0 195 821.0732208041276 0 820.9653198122978 PEAK CID FTMS 0 0 0 9824 29940.470703125 1.0 0 0.0 2 1 PQQ 3 -1 7.0077 0.0 0.0 0.42726 0.0 0.0 912.7877247119676 371.13837610416255 1283.9261008161302 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 PQQ 0.42726 - 497 + 1 2.122 117610.3 1.0 5963 3861 9824 DOHH2_400M_050219_1,9826 DOHH2_400M_050219_1,9826, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9827 57.924 112.0 342910.0 25 0 16526.0 -1 0 96 894.6327788558033 0 894.5836059451103 PEAK CID FTMS 0 0 0 9824 37237.70703125 0.5976885716772129 1 -0.0476303100585937 3 1 A 1 -1 3.0989 0.0 0.0 0.17339 0.0 0.0 1581.1448626659048 132.0460146539672 1713.190877319872 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.17339 - 13 + 1 2.122 28401.1 1.0 5964 3861 9824 DOHH2_400M_050219_1,9827 DOHH2_400M_050219_1,9827, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9828 57.934 552.0 631830.0 25 0 6092.1 -1 0 182 833.0072383582868 0 832.9117919802666 PEAK CID FTMS 0 0 0 -1 0 4 1 {I|L}VY 3 -1 11.972 0.0 0.0 0.7195 0.0 0.0 962.619138726536 323.1369722955688 1285.756111022105 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VY 0.7195 - 1274 + 1 2.122 222880.0 1.0 5965 3861 9824 DOHH2_400M_050219_1,9828 DOHH2_400M_050219_1,9828, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9829 57.94 294.0 87201.0 25 0 2682.9 -1 0 70 1151.622302700617 0 1151.809619128704 PEAK CID FTMS 0 0 0 -1 0 5 1 H 1 -1 5.4846 0.0 0.0 0.23833 0.0 0.0 925.1839842080716 1235.9894503229127 2161.173434530984 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.23833 - 2 + 1 2.122 24202.3 1.0 5966 3861 9824 DOHH2_400M_050219_1,9829 DOHH2_400M_050219_1,9829, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9830 57.944 238.0 72948.0 25 0 2870.6 -1 0 52 1008.931811511517 0 1008.931811511517 PEAK CID FTMS 0 0 0 -1 0 6 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.122 21816.0 1.0 5967 3861 9824 DOHH2_400M_050219_1,9830 DOHH2_400M_050219_1,9830, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9831 57.948 215.0 406350.0 25 0 20936.0 -1 0 143 920.1978637576104 0 920.1978637576104 PEAK CID FTMS 0 0 0 -1 0 7 1 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.29834 0.0 0.0 1556.2471546619015 132.04604517154533 1688.293199833447 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.29834 - 61 + 1 2.122 55685.6 1.0 5968 3861 9824 DOHH2_400M_050219_1,9831 DOHH2_400M_050219_1,9831, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9833 57.965 800.0 100590.0 25 0 8821.4 -1 0 89 1187.5583906663503 0 1187.609790027142 PEAK CID FTMS 0 0 0 9832 115180.296875 0.6343198116609763 3 -0.0753860473632812 1 1 PPPPPY 6 -1 32.652 0.0 0.0 1.3759 0.0 0.0 1530.6710985826314 191.0821932428344 1721.7532918254658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPPPY 1.3759 - 343 + 1 2.132 57013.3 0.6000000238418579 5969 3862 9832 DOHH2_400M_050219_1,9833 DOHH2_400M_050219_1,9833, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9834 57.969 188.0 73112.0 25 0 3882.0 -1 0 43 1056.673388659954 0 1056.673388659954 PEAK CID FTMS 0 0 0 -1 0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.132 16892.1 1.0 5970 3862 9832 DOHH2_400M_050219_1,9834 DOHH2_400M_050219_1,9834, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9835 57.974 244.0 237360.0 25 0 10302.0 + 6911 EEFGQAFSF 9 112 1061.4566057124157 1060.4493292458155 1 1061.458789050579 MULTI CID FTMS 0 0 0 9832 192464.9375 1.0 0 0.0 3 Unmodified _EEFGQAFSF_ ENSG00000231389|ENST00000419277|HLA-DPA1;ENST00000479107.1_1_6:33037343-33041347:-|nuORF 63.960520009940105 0.0238892913700936 1 {[QG]|[NA]}{M(Oxidation (M))|F}EEA{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 9 4 + 78.421 0.0 0.0 7.3951 7.3951 92.398 0.0 0.0 0.0 10.400217704352457 46.72955347754383 10.400217704352457 9.247425010840049 0 0.5994850021680094 0.0 2.1549471895720984 0.3252574989159953 {[QG]|[NA]}{M(Oxidation (M))|F}EEA{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[QG]|[NA]}{M(Oxidation (M))|F}EAE{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[QG]|[NA]}{M(Oxidation (M))|F}EA{M(Oxidation (M))|F}ES{M(Oxidation (M))|F};{[QG]|[NA]}A{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[QG]|[NA]}{M(Oxidation (M))|F}AEE{M(Oxidation (M))|F}S{M(Oxidation (M))|F};EE{M(Oxidation (M))|F}{[QG]|[NA]}A{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[QG]|[NA]}A{M(Oxidation (M))|F}E{M(Oxidation (M))|F}ES{M(Oxidation (M))|F};{[QG]|[NA]}{M(Oxidation (M))|F}AE{M(Oxidation (M))|F}ES{M(Oxidation (M))|F};{[QG]|[NA]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}EES{M(Oxidation (M))|F};{[QG]|[NA]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}EES{M(Oxidation (M))|F} 7.3951;6.5231;6.0275;5.8868;5.8868;5.5294;5.3912;5.3912;5.2949;5.2949 -;-;-;-;-;+;-;-;-;- + 2120 1 2.132 44300.9 1.0 5971 3862 9832 DOHH2_400M_050219_1,9835 DOHH2_400M_050219_1,9835,EEFGQAFSF True True EEFGQAFSF 57.973724 1061.45878905058 2251790.5 9832.0 ENSG00000231389|ENST00000419277|HLA-DPA1;;ENST00000479107.1_1_6:33037343-33041347:-|nuORF 7.073305606842041 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9836 57.98 325.0 52682.0 25 0 6838.3 -1 0 43 1098.127657007356 0 1098.059619128704 PEAK CID FTMS 0 0 0 9832 25968.84375 0.2164345787500948 1 -0.0433616638183593 4 1 V 1 -1 5.4846 0.0 0.0 0.24995 0.0 0.0 1110.8233549309246 981.32868372135 2092.1520386522743 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.24995 - 1 + 1 2.132 20188.3 1.0 5972 3862 9832 DOHH2_400M_050219_1,9836 DOHH2_400M_050219_1,9836, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9837 57.985 268.0 156520.0 25 0 7644.9 -1 0 97 926.1752605845423 0 926.2073242068292 PEAK CID FTMS 0 0 0 -1 0 5 1 A 1 -1 5.4846 0.0 0.0 0.29641 0.0 0.0 1644.229810864594 132.04621301822502 1776.2760238828191 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.29641 - 7 + 1 2.132 31053.3 1.0 5973 3862 9832 DOHH2_400M_050219_1,9837 DOHH2_400M_050219_1,9837, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9838 57.988 148.0 1091800.0 25 0 57357.0 -1 0 187 856.3726684451103 0 856.3726684451103 PEAK CID FTMS 0 0 0 -1 0 6 1 RY 2 -1 9.464 0.0 0.0 0.55321 0.0 0.0 1272.49230236698 116.05130182437732 1388.5436041913572 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 RY 0.55321 - 460 + 1 2.132 104624.0 1.0 5974 3862 9832 DOHH2_400M_050219_1,9838 DOHH2_400M_050219_1,9838, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9839 57.992 205.0 402250.0 25 0 17334.0 -1 0 143 930.0614681056276 0 929.8743774294852 PEAK CID FTMS 0 0 0 -1 0 7 1 H 1 -1 5.4846 0.0 0.0 0.29517 0.0 0.0 709.6085796665303 1008.444467412756 1718.0530470792864 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.29517 - 42 + 1 2.132 55714.8 1.0 5975 3862 9832 DOHH2_400M_050219_1,9839 DOHH2_400M_050219_1,9839, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9841 58.002 449.0 221090.0 25 0 12046.0 -1 0 150 908.1864712453488 0 908.6087524294852 PEAK CID FTMS 0 0 0 -1 0 1 1 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.30229 0.0 0.0 1532.225376717457 132.04602991275627 1664.2714066302133 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.30229 - 232 + 1 2.132 66696.6 1.0 5976 3863 9840 DOHH2_400M_050219_1,9841 DOHH2_400M_050219_1,9841, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9842 58.015 800.0 116280.0 25 0 4015.5 -1 0 114 940.4807195253572 0 940.1622802615166 PEAK CID FTMS 0 0 0 -1 0 2 1 A 1 -1 4.6041 0.0 0.0 0.24504 0.0 0.0 1582.797149644661 222.0889834039672 1804.886133048628 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.24504 - 53 + 1 2.132 60848.2 0.959999978542328 5977 3863 9840 DOHH2_400M_050219_1,9842 DOHH2_400M_050219_1,9842, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9843 58.02 229.0 555390.0 25 0 26469.0 + 32297 RWRKRWRWRRY 11 170 903.0175659060478 0 903.0175659060478 PEAK CID FTMS 0 0 0 -1 0 3 Unmodified _RWRKRWRWRRY_ ENST00000507209.5_1_4:187125362-187125452:+|nuORF 0.0 0.4761840153648598 1 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 2 11 9.464 0.0 0.0 0.5246 0.0 0.0 1374.8223499744015 132.04602991275627 1506.868379887158 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 0.5246 - 178 + 1 2.132 83872.4 1.0 5978 3863 9840 DOHH2_400M_050219_1,9843 DOHH2_400M_050219_1,9843,RWRKRWRWRRY False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9846 58.035 542.0 44830.0 25 0 3617.4 -1 0 62 1074.9762904360498 0 1075.369311511517 PEAK CID FTMS 0 0 0 -1 0 1 1 T 1 -1 6.9897 0.0 0.0 0.32541 0.0 0.0 775.7082431984571 1268.1281221979127 2043.8363653963693 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.32541 - 6 + 1 2.132 23890.7 1.0 5979 3865 9845 DOHH2_400M_050219_1,9846 DOHH2_400M_050219_1,9846, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9847 58.039 197.0 159440.0 25 0 3772.1 -1 0 87 1018.241616910686 0 1018.580249011517 PEAK CID FTMS 0 0 0 9845 174333.90625 1.0 0 0.0 2 1 P 1 -1 3.9794 0.0 0.0 0.1956 0.0 0.0 1752.334538897741 182.05719934635 1934.391738244091 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.1956 - 9 + 1 2.132 30401.7 1.0 5980 3865 9845 DOHH2_400M_050219_1,9847 DOHH2_400M_050219_1,9847, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9848 58.044 284.0 555740.0 25 0 22908.0 + -1 RWDWCHCRSWC 11 197 875.8389160037041 0 875.8389160037041 PEAK CID FTMS 0 0 0 -1 0 3 Acetyl (Protein N-term),3 Carbamidomethyl (C) _(Acetyl (Protein N-term))RWDWC(Carbamidomethyl (C))HC(Carbamidomethyl (C))RSWC(Carbamidomethyl (C))_ REV__ENST00000487010.1_1_2:189873708-189873756:+|nuORF 0.0 0.4761840153648598 1 QGPGY{M(Oxidation (M))|F} 6 -1 11.024 0.0 0.0 0.63004 0.0 0.0 965.2880482165892 132.04587732486564 1097.333925541455 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 QGPGY{M(Oxidation (M))|F} 0.63004 - 1762 + 1 2.132 101600.7 1.0 5981 3865 9845 DOHH2_400M_050219_1,9848 DOHH2_400M_050219_1,9848,RWDWCHCRSWC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9849 58.049 261.0 285810.0 25 0 4468.1 -1 0 122 821.6571097717485 0 821.6779052615166 PEAK CID FTMS 0 0 0 -1 0 4 1 T 1 -1 4.6041 0.0 0.0 0.28052 0.0 0.0 933.343564170647 603.8897799127561 1537.2333440834032 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.28052 - 43 + 1 2.132 54352.2 1.0 5982 3865 9845 DOHH2_400M_050219_1,9849 DOHH2_400M_050219_1,9849, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9850 58.051 69.0 156640.0 25 0 7583.0 -1 0 36 1020.7104860315444 0 1021.085742175579 PEAK CID FTMS 0 0 0 -1 0 5 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.132 18794.5 1.0 5983 3865 9845 DOHH2_400M_050219_1,9850 DOHH2_400M_050219_1,9850, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9852 58.055 107.0 667630.0 25 0 37992.0 -1 0 128 856.065024655836 0 855.7496215701103 PEAK CID FTMS 0 0 0 9851 48421.6796875 1.0 0 0.0 1 1 Y 1 -1 5.4846 0.0 0.0 0.32071 0.0 0.0 1427.9826056087438 116.05122553043202 1544.0338311391758 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.32071 - 119 + 1 2.132 50492.6 1.0 5984 3866 9851 DOHH2_400M_050219_1,9852 DOHH2_400M_050219_1,9852, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9853 58.069 800.0 72128.0 25 0 14977.0 19023 LDLGIKTSL 9 79 480.2922217781266 958.5698906230532 2 480.2914306521416 MULTI CID FTMS 0 0 0 9851 57763.640625 0.5355929458087941 -1 0.0271835327148437 2 Unmodified _LDLGIKTSL_ ENST00000425030.1_1_2:201987361-201987433:+|nuORF 27.628801355627647 0.1796483985696185 1 {NN|[MP]|[D{I|L}]|[EV]}{I|L}G[K{I|L}]TS{I|L} 9 0 + 51.365 0.0 0.0 5.3585 5.3585 90.669 0.0 0.0 0.0 22.987956947427502 13.930081918074537 13.930081918074537 51.36509455515871 0 0.4247425010840047 2.0 0.9247425010840048 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}{I|L}G[K{I|L}]TS{I|L} 5.3585 + + 153 + 1 2.132 53781.9 0.3499999940395355 5985 3866 9851 DOHH2_400M_050219_1,9853 DOHH2_400M_050219_1,9853,LDLGIKTSL False True DLIGKLTSL 58.068934 480.291430652142 670872.9375 9851.0 nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;;ENSG00000108465|ENST00000338399|CDK5RAP3;;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3;;nc|ENSG00000108465|Q96JB5-3|CDK5RAP3 2.735239466031393 2.0 False 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9854 58.072 144.0 255020.0 25 0 13507.0 -1 0 89 928.515673816204 0 928.515673816204 PEAK CID FTMS 0 0 0 -1 0 3 1 P 1 -1 3.0989 0.0 0.0 0.16706 0.0 0.0 728.9857410876831 1025.9704073541627 1754.956148441846 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.16706 - 4 + 1 2.132 28641.1 1.0 5986 3866 9851 DOHH2_400M_050219_1,9854 DOHH2_400M_050219_1,9854, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9855 58.079 369.0 950990.0 25 0 41976.0 -1 0 256 845.3321459201351 0 845.4511596560478 PEAK CID FTMS 0 0 0 -1 0 4 1 QGYY 4 -1 14.949 0.0 0.0 0.88523 0.0 0.0 1058.3726829919644 116.0512713067992 1174.4239542987636 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QGYY 0.88523 - 1473 + 1 2.132 219302.6 1.0 5987 3866 9851 DOHH2_400M_050219_1,9855 DOHH2_400M_050219_1,9855, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9856 58.083 255.0 106360.0 25 0 4148.1 -1 0 64 976.4499389529228 0 976.4499389529228 PEAK CID FTMS 0 0 0 -1 0 5 1 G 1 -1 5.4846 0.0 0.0 0.28113 0.0 0.0 1100.6528553454957 790.1737764947874 1890.826631840283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.28113 - 5 + 1 2.132 26261.9 1.0 5988 3866 9851 DOHH2_400M_050219_1,9856 DOHH2_400M_050219_1,9856, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9857 58.088 268.0 221480.0 25 0 14684.0 + -1 FSGGYCGG 8 125 804.2951145554192 803.2878380888192 1 804.2679931521416 MULTI CID FTMS 0 0 0 -1 0 6 Carbamidomethyl (C) _FSGGYC(Carbamidomethyl (C))GG_ REV__ENSG00000274749|ENST00000621162|KRTAP7-1 5.230669730166228 0.792582437072536 1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N 3 -1 18.416 0.0 0.0 2.2926 0.0 0.0 0.0 452.1209429074317 452.1209429074317 11.426675035687314 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N 2.2926 - 118 1 2.132 45362.0 1.0 5989 3866 9851 DOHH2_400M_050219_1,9857 DOHH2_400M_050219_1,9857,FSGGYCGG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 9858 58.102 800.0 63871.0 25 0 1136.3 -1 0 106 1151.909594714642 0 1151.909594714642 PEAK CID FTMS 0 0 0 -1 0 7 1 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.30366 0.0 0.0 1632.6010364978404 519.1501558893186 2151.751192387159 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.30366 - 11 + 1 2.132 35320.5 0.6399999856948853 5990 3866 9851 DOHH2_400M_050219_1,9858 DOHH2_400M_050219_1,9858, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9859 58.11 424.0 160950.0 25 0 2634.6 -1 0 91 953.0209069236528 0 952.9368163943292 PEAK CID FTMS 0 0 0 -1 0 8 1 P 1 -1 3.9794 0.0 0.0 0.209 0.0 0.0 1595.878897732268 208.07319055728752 1803.952088289556 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.209 - 7 + 1 2.132 46459.7 1.0 5991 3866 9851 DOHH2_400M_050219_1,9859 DOHH2_400M_050219_1,9859, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9860 58.114 235.0 177720.0 25 0 30655.0 -1 0 87 958.6206964398918 0 958.5374633669852 PEAK CID FTMS 0 0 0 -1 0 9 1 {I|L}ST{I|L}{NN|[MP]|[D{I|L}]|[EV]}{I|L} 7 -1 29.697 0.0 0.0 1.5506 0.0 0.0 974.66630635459 182.0938662164672 1156.7601725710572 0.0 0.0 0.0 0.0 0 0.0 0.0 1.035666875892183 0.0 {I|L}ST{I|L}{NN|[MP]|[D{I|L}]|[EV]}{I|L} 1.5506 - 73 + 1 2.132 34851.5 1.0 5992 3866 9851 DOHH2_400M_050219_1,9860 DOHH2_400M_050219_1,9860, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9862 58.128 659.0 224950.0 25 0 3174.5 -1 0 112 816.5685643206087 0 816.7282592654228 PEAK CID FTMS 0 0 0 9861 13498.5498046875 0.7384745208535682 1 -0.0424118041992187 1 1 G 1 -1 3.0989 0.0 0.0 0.18999 0.0 0.0 1348.988891481258 222.0890749567016 1571.0779664379595 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.18999 - 153 + 1 2.132 96503.2 1.0 5993 3867 9861 DOHH2_400M_050219_1,9862 DOHH2_400M_050219_1,9862, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9863 58.137 520.0 399650.0 25 0 29822.0 18437 KYEDLYAFSYN 11 129 706.8222352400663 1411.6299175469326 2 706.8229247927666 MULTI CID FTMS 0 0 0 9861 165410.171875 0.3032177844900763 -5 0.1660003662109375 2 Unmodified _KYEDLYAFSYN_ ENSG00000139505|ENST00000381801|MTMR6;nc|ENSG00000139505|Q9Y217-2|MTMR6 20.41453444215458 0.6105011870913812 1 [YT]D{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}E 8 8 50.266 0.0 0.0 3.5609 0.0 0.0 0.0 397.1396581077326 397.1396581077326 13.17813613461646 0.0 0.0 0.0 0 0.2887254899964357 1.3010299956639813 1.896256663007296 0.0 [YT]D{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}E 3.5609 - 8250 1 2.132 153123.7 1.0 5994 3867 9861 DOHH2_400M_050219_1,9863 DOHH2_400M_050219_1,9863,KYEDLYAFSYN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9864 58.146 535.0 127450.0 25 0 2830.7 -1 0 117 1059.4053956225698 3175.19435746791 3 1060.516406238079 MULTI CID FTMS 0 0 0 9861 72476.015625 1.0 0 0.0 3 1 [{I|L}T][C(Carbamidomethyl (C))S]{[CP]|[EA]}{M(Oxidation (M))|F} 7 -1 19.212 0.0 0.0 0.60505 0.0 0.0 0.0 2363.826107306053 2363.826107306053 11.252794248470224 0.0 0.0 0.0 0 0.0 2.0 0.8252574989159953 0.0 [{I|L}T][C(Carbamidomethyl (C))S]{[CP]|[EA]}{M(Oxidation (M))|F} 0.60505 - 544 1 2.132 48836.5 1.0 5995 3867 9861 DOHH2_400M_050219_1,9864 DOHH2_400M_050219_1,9864, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9865 58.153 394.0 50313.0 25 0 1306.4 -1 0 59 1089.963435676139 6533.7369552572345 6 1090.295336902142 MULTI CID FTMS 0 0 0 -1 0 4 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.132 21401.6 1.0 5996 3867 9861 DOHH2_400M_050219_1,9865 DOHH2_400M_050219_1,9865, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9866 58.157 158.0 801460.0 25 0 8406.3 -1 0 95 871.5685958866289 0 871.5060912966728 PEAK CID FTMS 0 0 0 9861 27844.318359375 0.6939319672394474 1 -0.0424118041992187 5 1 E 1 -1 4.5116 0.0 0.0 0.25912 0.0 0.0 1311.9731465078296 297.08478723697505 1609.0579337448046 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 E 0.25912 - 65 + 1 2.132 80949.4 1.0 5997 3867 9861 DOHH2_400M_050219_1,9866 DOHH2_400M_050219_1,9866, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9868 58.173 800.0 48353.0 25 0 1045.4 -1 0 94 1157.880175769329 0 1157.880175769329 PEAK CID FTMS 0 0 0 -1 0 1 1 Q 1 -1 3.4949 0.0 0.0 0.15105 0.0 0.0 1490.7033314197145 691.9768160455686 2182.680147465283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.15105 - 11 + 1 2.132 31351.4 0.5799999833106995 5998 3868 9867 DOHH2_400M_050219_1,9868 DOHH2_400M_050219_1,9868, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9869 58.179 328.0 57477.0 25 0 2303.1 -1 0 55 1077.4830652290975 0 1077.031542956829 PEAK CID FTMS 0 0 0 9867 86337.53125 1.0 0 0.0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.132 21922.1 1.0 5999 3868 9867 DOHH2_400M_050219_1,9869 DOHH2_400M_050219_1,9869, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9870 58.188 547.0 91297.0 25 0 5994.4 -1 0 109 971.7744018435478 0 971.7744018435478 PEAK CID FTMS 0 0 0 -1 0 3 1 Y 1 -1 5.4846 0.0 0.0 0.28249 0.0 0.0 1563.3778919665892 212.0684298151 1775.4463217816892 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.28249 - 26 + 1 2.132 41761.5 1.0 6000 3868 9867 DOHH2_400M_050219_1,9870 DOHH2_400M_050219_1,9870, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9871 58.199 598.0 279300.0 25 0 13265.0 -1 0 200 891.0995882946983 0 890.9628784060478 PEAK CID FTMS 0 0 0 -1 0 4 1 QP 2 -1 9.464 0.0 0.0 0.53163 0.0 0.0 1149.9055676616333 402.1426180475219 1552.0481857091552 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QP 0.53163 - 582 + 1 2.132 110974.5 1.0 6001 3868 9867 DOHH2_400M_050219_1,9871 DOHH2_400M_050219_1,9871, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9874 58.207 127.0 95775.0 25 0 4497.2 -1 0 34 1175.7000806542494 0 1175.649462878704 PEAK CID FTMS 0 0 0 9873 178894.375 1.0 0 0.0 1 1 P 1 -1 3.0989 0.0 0.0 0.1319 0.0 0.0 1586.1013199004926 663.2107637994749 2249.3120836999674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.1319 - 1 + 1 2.134 16742.0 1.0 6002 3870 9873 DOHH2_400M_050219_1,9874 DOHH2_400M_050219_1,9874, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9875 58.22 723.0 90857.0 25 0 997.8 -1 0 104 1198.267871081829 0 1198.267871081829 PEAK CID FTMS 0 0 0 -1 0 2 1 {M(Oxidation (M))|F}Q 2 -1 7.9588 0.0 0.0 0.33238 0.0 0.0 1130.8749012439332 985.5020235651 2116.376924809033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Q 0.33238 - 14 + 1 2.134 42916.1 1.0 6003 3870 9873 DOHH2_400M_050219_1,9875 DOHH2_400M_050219_1,9875, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9876 58.224 201.0 414810.0 25 0 5536.6 -1 WDLYRFTCKCW 11 130 817.8676960141628 0 818.1932250857353 PEAK CID FTMS 0 0 0 9873 84749.1015625 1.0 0 0.0 3 2 Carbamidomethyl (C) _WDLYRFTC(Carbamidomethyl (C))KC(Carbamidomethyl (C))W_ ENST00000303575.8_1_14:75598190-75598304:-|nuORF 0.3506318815782774 0.47618401536486 1 {M(Oxidation (M))|F}P 2 -1 5.0886 0.0 0.0 0.31148 0.0 0.0 1204.5249905617254 182.05770288638908 1386.5826934481145 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}P 0.31148 - 88 + 1 2.134 61489.6 1.0 6004 3870 9873 DOHH2_400M_050219_1,9876 DOHH2_400M_050219_1,9876,WDLYRFTCKCW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9878 58.236 611.0 196410.0 25 0 9669.9 -1 0 170 893.8640818273678 0 893.8653442263603 PEAK CID FTMS 0 0 0 9877 58340.22265625 0.3501535929909529 1 -0.0439872741699218 1 1 Y{M(Oxidation (M))|F} 2 -1 7.4743 0.0 0.0 0.41856 0.0 0.0 1340.517426494776 132.04604517154533 1472.5634716663214 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.41856 - 476 + 1 2.134 79822.0 1.0 6005 3871 9877 DOHH2_400M_050219_1,9878 DOHH2_400M_050219_1,9878, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9879 58.25 800.0 375120.0 25 0 4483.4 -1 LMYYRRERRFL 11 118 830.9408070890779 0 831.1980468630791 PEAK CID FTMS 0 0 0 9877 64867.1015625 1.0 0 0.0 2 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))LM(Oxidation (M))YYRRERRFL_ ENST00000477571.5_1_7:140045707-140045746:-|nuORF 0.0 0.4761840153648598 1 M[SG]GAPQGPN 10 -1 18.567 0.0 0.0 1.1186 0.0 0.0 529.3881316568683 231.0785311334594 760.4666627903276 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M[SG]GAPQGPN 1.1186 - 1111 + 1 2.134 187938.8 0.9399999976158142 6006 3871 9877 DOHH2_400M_050219_1,9879 DOHH2_400M_050219_1,9879,LMYYRRERRFL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_1 9880 58.258 410.0 134770.0 25 0 6741.8 -1 0 122 911.1491882186084 0 911.3472778201104 PEAK CID FTMS 0 0 0 9877 22888.36328125 0.5225291626391828 1 -0.0439872741699218 3 1 T 1 -1 3.9794 0.0 0.0 0.21861 0.0 0.0 1494.1235584667106 222.08913599185783 1716.2126944585684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.21861 - 34 + 1 2.134 38200.4 1.0 6007 3871 9877 DOHH2_400M_050219_1,9880 DOHH2_400M_050219_1,9880, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9881 58.268 565.0 77677.0 25 0 4851.8 -1 0 98 926.6371036134824 0 927.0345947146416 PEAK CID FTMS 0 0 0 -1 0 4 1 A 1 -1 5.4846 0.0 0.0 0.29626 0.0 0.0 1645.1534206285285 132.0459383600219 1777.1993589885503 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.29626 - 8 + 1 2.134 33380.3 1.0 6008 3871 9877 DOHH2_400M_050219_1,9881 DOHH2_400M_050219_1,9881, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9883 58.284 800.0 25101.0 25 0 893.81 -1 0 57 994.6422607302666 0 994.6422607302666 PEAK CID FTMS 0 0 0 -1 0 1 1 M 1 -1 0.9691 0.0 0.0 0.048765 0.0 0.0 848.8287586658081 1004.3584688776 1853.187227543408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.048765 - 2 + 1 2.134 22812.6 0.4799999892711639 6009 3872 9882 DOHH2_400M_050219_1,9883 DOHH2_400M_050219_1,9883, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9884 58.292 478.0 148150.0 25 0 11499.0 + + 18928 IVDEVNGLISMY 12 94 676.8419627861351 1351.6693726390702 2 676.8422729372978 MULTI CID FTMS 0 0 0 9882 94114.328125 1.0 0 0.0 2 Unmodified _LCRRDPVSPYF_ nc|ENSG00000108883|Q15029-3|EFTUD2;nc|ENSG00000108883|Q15029-2|EFTUD2;ENSG00000108883|ENST00000426333|EFTUD2 12.240655878213236 0.7805268987462184 1 [{I|L}V]DEVNG{I|L} 8 -1 45.404 0.0 0.0 3.3591 0.0 0.0 0.0 509.2066037725857 509.2066037725857 16.542746325786553 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3807196863200844 0.805462187404089 [{I|L}V]DEVNG{I|L} 3.3591 - 955 1 2.134 56262.3 1.0 6010 3872 9882 DOHH2_400M_050219_1,9884 DOHH2_400M_050219_1,9884,LCRRDPVSPYF False False IVDEVNGLISMY 58.292118 676.842272937298 527403.1875 9882.0 nc|ENSG00000108883|Q15029-3|EFTUD2;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 7.330176830291748 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9885 58.306 800.0 28150.0 25 0 2383.6 -1 0 62 989.1354858279228 0 989.1354858279228 PEAK CID FTMS 0 0 0 -1 0 3 1 A 1 -1 1.5938 0.0 0.0 0.080647 0.0 0.0 1751.1445240466674 151.05196558170158 1902.196489628369 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.080647 - 4 + 1 2.134 29262.3 0.5199999809265137 6011 3872 9882 DOHH2_400M_050219_1,9885 DOHH2_400M_050219_1,9885, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9886 58.313 395.0 118030.0 25 0 7276.9 -1 0 106 880.7302078166186 0 880.8464233279228 PEAK CID FTMS 0 0 0 -1 0 4 1 TS 2 -1 7.0783 0.0 0.0 0.40231 0.0 0.0 791.0086201236685 777.3496798150999 1568.3582999387684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TS 0.40231 - 15 + 1 2.134 37348.4 1.0 6012 3872 9882 DOHH2_400M_050219_1,9886 DOHH2_400M_050219_1,9886, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9889 58.324 265.0 16005.0 25 0 1881.7 -1 0 13 1091.414164285424 0 1091.163989245892 PEAK CID FTMS 0 0 0 9888 41275.76171875 0.529194824780068 1 -0.0304374694824218 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 14145.8 1.0 6013 3874 9888 DOHH2_400M_050219_1,9889 DOHH2_400M_050219_1,9889, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9890 58.338 800.0 60807.0 25 0 837.42 -1 0 94 984.220263659954 0 984.220263659954 PEAK CID FTMS 0 0 0 -1 0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 39119.5 0.6899999976158142 6014 3874 9888 DOHH2_400M_050219_1,9890 DOHH2_400M_050219_1,9890, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9891 58.341 120.0 406530.0 25 0 24034.0 -1 0 103 872.0377075076103 0 872.0377075076103 PEAK CID FTMS 0 0 0 -1 0 3 1 Y 1 -1 6.9897 0.0 0.0 0.40123 0.0 0.0 1459.9260792224486 116.05125604801016 1575.9773352704588 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.40123 - 50 + 1 2.134 38376.1 1.0 6015 3874 9888 DOHH2_400M_050219_1,9891 DOHH2_400M_050219_1,9891, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9892 58.347 380.0 96058.0 25 0 5343.2 -1 0 87 936.6006401694792 0 936.7083007693292 PEAK CID FTMS 0 0 0 -1 0 4 1 P 1 -1 3.0989 0.0 0.0 0.16561 0.0 0.0 1646.0380590481393 125.07251917056875 1771.110578218708 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.16561 - 3 + 1 2.134 27280.1 1.0 6016 3874 9888 DOHH2_400M_050219_1,9892 DOHH2_400M_050219_1,9892, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9894 58.362 677.0 11885.0 25 0 1119.8 -1 0 23 1189.962329089642 0 1189.962329089642 PEAK CID FTMS 0 0 0 -1 0 1 1 C 1 -1 3.9794 0.0 0.0 0.16735 0.0 0.0 1599.5436634509654 672.3443697565061 2271.8880332074714 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.16735 - 1 + 1 2.134 14907.6 1.0 6017 3875 9893 DOHH2_400M_050219_1,9894 DOHH2_400M_050219_1,9894, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9895 58.371 536.0 60543.0 25 0 3859.8 -1 0 82 936.6006401694792 0 936.8489257693292 PEAK CID FTMS 0 0 0 -1 0 2 1 A 1 -1 5.4846 0.0 0.0 0.29311 0.0 0.0 1665.0806463284127 132.04604517154533 1797.126691499958 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.29311 - 5 + 1 2.134 28501.2 1.0 6018 3875 9893 DOHH2_400M_050219_1,9895 DOHH2_400M_050219_1,9895, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9896 58.382 608.0 18329.0 25 0 1121.5 -1 0 36 1022.870065139762 0 1022.868579089642 PEAK CID FTMS 0 0 0 9893 76150.4921875 1.0 0 0.0 3 1 SM 2 -1 7.0783 0.0 0.0 0.34635 0.0 0.0 934.2044114301116 888.3980196588499 1822.602431088961 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SM 0.34635 - 6 + 1 2.134 15605.7 1.0 6019 3875 9893 DOHH2_400M_050219_1,9896 DOHH2_400M_050219_1,9896, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9899 58.393 277.0 330510.0 25 0 23053.0 + 18438 YTDYGGLIFNSY 12 104 706.8222352400663 1411.6299175469326 2 706.8224975466728 MULTI CID FTMS 0 0 0 9898 237447.484375 0.4352712975798031 5 -0.0493736267089843 1 Unmodified _KYEDLYAFSYN_ ENSG00000198712|ENST00000361739|MT-CO2 20.41453444215458 0.6105011870913812 1 [YT]D{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L} 7 7 51.195 0.0 0.0 3.6266 0.0 0.0 0.0 526.1952611350763 526.1952611350763 22.33825649412304 0.0 0.0 0.0 0 0.6237125054200234 1.3010299956639813 1.870371515030528 0.4247425010840047 [YT]D{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L} 3.6266 - 2280 1 2.134 69166.3 1.0 6020 3877 9898 DOHH2_400M_050219_1,9899 DOHH2_400M_050219_1,9899,KYEDLYAFSYN False False YTDYGGLIFNSY 58.393217 706.822497546673 6434519.0 9898.0 ENSG00000198712|ENST00000361739|MT-CO2 7.185876846313477 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9900 58.407 800.0 24392.0 25 0 615.81 -1 0 58 1153.488330066204 0 1153.488330066204 PEAK CID FTMS 0 0 0 -1 0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 22268.3 0.6000000238418579 6021 3877 9898 DOHH2_400M_050219_1,9900 DOHH2_400M_050219_1,9900, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9903 58.427 800.0 17151.0 25 0 693.93 -1 0 44 1198.858325183392 0 1198.858325183392 PEAK CID FTMS 0 0 0 -1 0 1 1 SS 2 -1 10.969 0.0 0.0 0.45787 0.0 0.0 1111.1509022204966 1107.4771212213502 2218.628023441847 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SS 0.45787 - 4 + 1 2.134 17747.8 0.6000000238418579 6022 3879 9902 DOHH2_400M_050219_1,9903 DOHH2_400M_050219_1,9903, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9907 58.453 800.0 15425.0 25 0 909.94 -1 0 36 1044.486621081829 0 1044.486621081829 PEAK CID FTMS 0 0 0 -1 0 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 20606.1 0.6000000238418579 6023 3882 9906 DOHH2_400M_050219_1,9907 DOHH2_400M_050219_1,9907, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9908 58.467 800.0 19773.0 25 0 575.09 -1 0 49 1127.410205066204 0 1127.410205066204 PEAK CID FTMS 0 0 0 -1 0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 21732.9 0.6200000047683716 6024 3882 9906 DOHH2_400M_050219_1,9908 DOHH2_400M_050219_1,9908, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9909 58.473 368.0 81197.0 25 0 4492.7 -1 0 78 930.219514269927 0 930.217333972454 PEAK CID FTMS 0 0 0 9906 76143.890625 1.0 0 0.0 3 1 {I|L} 1 -1 3.9794 0.0 0.0 0.21413 0.0 0.0 1617.2455948466911 125.072580205725 1742.3181750524163 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.21413 - 2 + 1 2.134 27171.5 1.0 6025 3882 9906 DOHH2_400M_050219_1,9909 DOHH2_400M_050219_1,9909, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9913 58.492 492.0 24587.0 25 0 1639.1 -1 0 37 1038.1258317999818 0 1037.748461902142 PEAK CID FTMS 0 0 0 -1 0 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 19764.5 1.0 6026 3885 9912 DOHH2_400M_050219_1,9913 DOHH2_400M_050219_1,9913, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9914 58.506 800.0 15800.0 25 0 1042.8 -1 0 36 1113.8310211689786 0 1113.999316394329 PEAK CID FTMS 0 0 0 -1 0 2 1 V 1 -1 3.9794 0.0 0.0 0.1788 0.0 0.0 1382.9727590354198 740.5757540338499 2123.5485130692696 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.1788 - 2 + 1 2.134 17823.2 0.6499999761581421 6027 3885 9912 DOHH2_400M_050219_1,9914 DOHH2_400M_050219_1,9914, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9915 58.513 411.0 29192.0 25 0 3608.7 -1 0 25 1187.641772449017 0 1187.641772449017 PEAK CID FTMS 0 0 0 -1 0 3 1 {M(Oxidation (M))|F}PP 3 -1 13.188 0.0 0.0 0.55567 0.0 0.0 1577.8759998767466 451.1942275598404 2029.070227436587 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}PP 0.55567 - 11 + 1 2.134 16978.1 1.0 6028 3885 9912 DOHH2_400M_050219_1,9915 DOHH2_400M_050219_1,9915, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9917 58.53 800.0 84878.0 25 0 3298.0 -1 0 132 931.487031786423 0 931.2947265505792 PEAK CID FTMS 0 0 0 9916 21751.015625 0.4768220336297975 1 -0.0289077758789062 1 1 KD 2 -1 4.6927 0.0 0.0 0.25217 0.0 0.0 1482.761739498824 132.04595361881096 1614.807693117635 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KD 0.25217 - 62 + 1 2.134 45736.5 0.3799999952316284 6029 3886 9916 DOHH2_400M_050219_1,9917 DOHH2_400M_050219_1,9917, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9918 58.542 719.0 29639.0 25 0 2372.5 + -1 NEFPNIGSW 9 62 1063.4815468719194 0 1063.481982409954 PEAK CID FTMS 0 0 0 9916 102554.3828125 1.0 0 0.0 2 ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4 1 Y{M(Oxidation (M))|F} 2 -1 7.9588 0.0 0.0 0.37454 0.0 0.0 1142.4953680584888 669.3019018775544 1811.7972699360432 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.37454 - 15 + 1 2.134 23281.6 1.0 6030 3886 9916 DOHH2_400M_050219_1,9918 DOHH2_400M_050219_1,9918, False False NEFPNIGSW 58.542314 1063.48198240995 433673.53125 9916.0 ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4 5.99921989440918 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 9921 58.554 263.0 38366.0 25 0 1708.1 -1 0 35 1127.9168006506525 0 1127.492968738079 PEAK CID FTMS 0 0 0 9920 13131.08984375 0.4110359409559038 -1 0.0040016174316406 1 1 Q 1 -1 3.9794 0.0 0.0 0.17656 0.0 0.0 1317.5791324518923 805.1805513971311 2122.7596838490235 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.17656 - 1 + 1 2.134 15734.9 1.0 6031 3888 9920 DOHH2_400M_050219_1,9921 DOHH2_400M_050219_1,9921, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9924 58.565 281.0 13257.0 25 0 1853.9 -1 0 12 1122.7536057836098 0 1122.432666003704 PEAK CID FTMS 0 0 0 9923 36850.9609375 0.63039150062823 1 -0.0403900146484375 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 14071.8 1.0 6032 3890 9923 DOHH2_400M_050219_1,9924 DOHH2_400M_050219_1,9924, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9925 58.579 800.0 44628.0 25 0 2842.2 -1 0 58 1155.5383867213247 4618.124441018899 4 1156.036669909954 MULTI CID FTMS 0 0 0 9923 29827.86328125 0.3271459674193003 2 -0.0440597534179687 2 1 VQY{M(Oxidation (M))|F} 4 -1 23.175 0.0 0.0 0.50183 0.0 0.0 2988.4023496425434 1089.4350376345155 4077.837387277059 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 VQY{M(Oxidation (M))|F} 0.50183 - 63 + 1 2.134 32122.3 0.5400000214576721 6033 3890 9923 DOHH2_400M_050219_1,9925 DOHH2_400M_050219_1,9925, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9926 58.584 262.0 36425.0 25 0 2568.7 -1 0 28 1039.807788074017 0 1039.807788074017 PEAK CID FTMS 0 0 0 -1 0 3 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 17701.3 1.0 6034 3890 9923 DOHH2_400M_050219_1,9926 DOHH2_400M_050219_1,9926, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9927 58.598 800.0 40813.0 25 0 1453.0 -1 0 73 939.3830444216728 0 939.3830444216728 PEAK CID FTMS 0 0 0 -1 0 4 1 C(Carbamidomethyl (C)) 1 -1 0.27759 0.0 0.0 0.014791 0.0 0.0 1108.7470936267457 604.9459322565061 1713.6930258832515 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.014791 - 1 + 1 2.134 27152.7 0.8999999761581421 6035 3890 9923 DOHH2_400M_050219_1,9927 DOHH2_400M_050219_1,9927, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9930 58.619 800.0 21479.0 25 0 878.39 -1 0 50 1127.370654284954 0 1127.370654284954 PEAK CID FTMS 0 0 0 -1 0 1 1 T 1 -1 4.6041 0.0 0.0 0.20438 0.0 0.0 1447.904137083777 700.7428072565061 2148.646944340283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.20438 - 3 + 1 2.134 19677.1 0.5099999904632568 6036 3892 9929 DOHH2_400M_050219_1,9930 DOHH2_400M_050219_1,9930, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9931 58.633 800.0 17372.0 25 0 686.28 -1 0 41 1126.496386706829 0 1126.496386706829 PEAK CID FTMS 0 0 0 -1 0 2 1 W 1 -1 3.0989 0.0 0.0 0.13767 0.0 0.0 1125.5207752673707 936.3548067682248 2061.8755820355955 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.13767 - 2 + 1 2.134 16417.4 0.5 6037 3892 9929 DOHH2_400M_050219_1,9931 DOHH2_400M_050219_1,9931, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9935 58.653 550.0 30491.0 25 0 1724.7 -1 0 44 1148.1031186892956 0 1148.374316394329 PEAK CID FTMS 0 0 0 -1 0 1 1 P 1 -1 5.4846 0.0 0.0 0.23906 0.0 0.0 1747.498704564335 446.6213167779906 2194.120021342326 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.23906 - 1 + 1 2.134 18789.7 1.0 6038 3895 9934 DOHH2_400M_050219_1,9935 DOHH2_400M_050219_1,9935, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9936 58.662 527.0 15975.0 25 0 854.54 -1 YMEDAVCQL 9 28 1144.464164945927 1143.456888479327 1 1145.152880847454 MULTI CID FTMS 0 0 0 -1 0 2 Carbamidomethyl (C),Oxidation (M) _YM(Oxidation (M))EDAVC(Carbamidomethyl (C))QL_ ENSG00000149179|ENST00000278460|CSTPP1;ENST00000522712.6_1_11:46958356-47074212:+|nuORF;ENST00000526424.5_1_11:46969642-47125317:+|nuORF;ENST00000532840.5_1_11:46958356-47159359:+|nuORF;nc|ENSG00000149179|Q9H6J7-2|CSTPP1;nc|ENSG00000149179|Q9H6J7-3|CSTPP1;nc|ENSG00000149179|Q9H6J7-4|CSTPP1 0.5247636613948944 0.8963649302248013 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 18195.4 1.0 6039 3895 9934 DOHH2_400M_050219_1,9936 DOHH2_400M_050219_1,9936,YMEDAVCQL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9940 58.682 520.0 12708.0 25 0 1071.9 -1 0 19 1092.514819324017 0 1092.514819324017 PEAK CID FTMS 0 0 0 -1 0 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 16569.9 1.0 6040 3898 9939 DOHH2_400M_050219_1,9940 DOHH2_400M_050219_1,9940, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9941 58.689 396.0 25069.0 25 0 1213.6 -1 0 32 1171.639331042767 0 1171.639331042767 PEAK CID FTMS 0 0 0 -1 0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 18788.7 1.0 6041 3898 9939 DOHH2_400M_050219_1,9941 DOHH2_400M_050219_1,9941, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9951 58.731 475.0 25273.0 25 0 1309.1 -1 0 32 1175.042163074017 0 1175.042163074017 PEAK CID FTMS 0 0 0 -1 0 1 1 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.13198 0.0 0.0 1381.8686756579966 816.0915621393186 2197.960237797315 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.13198 - 1 + 1 2.134 18907.2 1.0 6042 3907 9950 DOHH2_400M_050219_1,9951 DOHH2_400M_050219_1,9951, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9952 58.74 490.0 76419.0 25 0 5046.9 + 6023 DSDGSFFLY 9 65 1050.4412666185997 1049.4339901519998 1 1050.439135730267 MULTI CID FTMS 0 0 0 9950 135972.890625 0.0848272859097415 28 -0.1869850158691406 2 Unmodified _DSDGSFFLY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 60.38955033654506 0.025866396858536 1 DS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Y 6 3 51.961 0.0 0.0 4.9513 0.0 0.0 259.08052260566564 0.0 259.08052260566564 0.0 8.200302233990442 0.0 0.0 0 0.872363747448347 0.0 1.924742501084005 0.0 DS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Y 4.9513 - 410 1 2.134 31174.2 1.0 6043 3907 9950 DOHH2_400M_050219_1,9952 DOHH2_400M_050219_1,9952,DSDGSFFLY True True DSDGSFFLY 58.740194 1050.43913573027 9698456.0 9950.0 nc|ENSG00000211896|P01857|IGHG1;;nc|ENSG00000211892|P01861-1|IGHG4;;nc|ENSG00000211893|P01859|IGHG2;;nc|ENSG00000211897|P01860-1|IGHG3;;nc|ENSG00000211893|P01859-1|IGHG2;;nc|ENSG00000211892|P01861|IGHG4;;nc|ENSG00000211897|P01860|IGHG3;;nc|ENSG00000211896|P01857-1|IGHG1 7.163796742757161 1.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 9953 58.754 800.0 143800.0 25 0 31586.0 + 41737 VPTALEAGSW 10 62 1030.5177362868385 1029.5104598202386 1 1030.525683581829 MULTI CID FTMS 0 0 0 9950 106358.609375 0.5183195725488912 -23 0.2436180114746093 3 Unmodified _VPTALEAGSW_ ENSG00000107738|ENST00000394957|VSIR 26.88365393820708 0.3646707531412818 1 [VP]TA{[C(Carbamidomethyl (C))G]|[NC]}EA{I|L}{I|L} 10 5 + 67.184 0.0 0.0 6.5259 6.5259 87.103 0.0 0.0 0.0 10.043096649567076 19.291746928241125 10.043096649567076 7.3290220443144705 0 0.0 1.3010299956639813 1.6549471895720984 0.0 [VP]TA{[C(Carbamidomethyl (C))G]|[NC]}EA{I|L}{I|L};[VP]T[C(Carbamidomethyl (C))Q]EA{I|L}{I|L};[VP]T[{I|L}P]{[YD]|[{M(Oxidation (M))|F}M]}[EP] 6.5259;5.814;1.5005 -;-;- 116 1 2.134 82076.1 0.5799999833106995 6044 3907 9950 DOHH2_400M_050219_1,9953 DOHH2_400M_050219_1,9953,VPTALEAGSW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 9960 58.784 433.0 43486.0 25 0 2311.5 -1 0 55 945.9670264765416 0 945.8032104372978 PEAK CID FTMS 0 0 0 -1 0 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 20720.4 1.0 6045 3913 9959 DOHH2_400M_050219_1,9960 DOHH2_400M_050219_1,9960, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9961 58.798 800.0 10817.0 25 0 654.94 -1 0 27 1141.578784167767 0 1141.578784167767 PEAK CID FTMS 0 0 0 -1 0 2 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 19661.0 0.4799999892711639 6046 3913 9959 DOHH2_400M_050219_1,9961 DOHH2_400M_050219_1,9961, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9965 58.823 800.0 69627.0 25 0 1682.9 43278 WHKLHWHWWWT 11 72 851.9160040486977 0 852.3325073122978 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _WHKLHWHWWWT_ chr19:58306216-58312169|16|11.12|0.0|20.09|+|1|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,acceptor,+,58312169,58313278|ZNF8-ERVK3-1,None|11;chr19:58306216-58312266|18|11.0|0.0|20.07|+|0|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,acceptor,+,58312266,58313278|ZNF8-ERVK3-1,None|11 0.0 0.4761840153648598 1 R 1 11 1.9897 0.0 0.0 0.11692 0.0 0.0 945.2126598776574 597.4798067682249 1542.6924666458822 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.11692 - 2 + 1 2.134 43602.3 0.2899999916553497 6047 3916 9964 DOHH2_400M_050219_1,9965 DOHH2_400M_050219_1,9965,WHKLHWHWWWT False False False False TE_chimeric_transcript PXD020620_cell_line DOHH2_400M_050219_1 9971 58.855 800.0 31249.0 25 0 784.65 -1 0 61 966.4247189769696 0 966.5690185427666 PEAK CID FTMS 0 0 0 -1 0 1 1 S 1 -1 1.9897 0.0 0.0 0.10305 0.0 0.0 1161.690550159214 679.0821627252561 1840.77271288447 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.10305 - 2 + 1 2.134 26893.1 0.959999978542328 6048 3921 9970 DOHH2_400M_050219_1,9971 DOHH2_400M_050219_1,9971, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9989 58.936 798.0 13351.0 25 0 685.91 -1 0 35 1065.9685955614004 0 1066.192675769329 PEAK CID FTMS 0 0 0 -1 0 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 16824.8 1.0 6049 3938 9988 DOHH2_400M_050219_1,9989 DOHH2_400M_050219_1,9989, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 9997 58.975 737.0 56629.0 25 0 3395.7 + 34353 SLSTFQQMW 9 70 1127.5180667785598 1126.51079031196 1 1128.526538074017 MULTI CID FTMS 0 0 0 9996 33547.75 0.2792376425934635 -13 0.0648117065429687 1 Unmodified _SLSTFQQMW_ ENSG00000188219|ENST00000683005|POTEE;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;ENSG00000143632|ENST00000366684|ACTA1;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000163017|ENST00000345517|ACTG2;ENST00000428275.1_1_X:53172047-53172134:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI;ENSG00000184009|ENST00000573283|ACTG1;ENST00000574671.5_1_17:79477718-79478688:-|nuORF 30.63653989081413 0.1413794767160703 1 QQ{M(Oxidation (M))|F}TS{[TV]|[{I|L}S]}MW 9 6 + 54.152 0.0 0.0 4.8071 4.8071 76.281 0.0 0.0 0.0 9.559771852360797 12.690775249321078 9.559771852360797 2.728787452803374 0 1.2302046884880935 0.0 1.079689690656103 0.7742275032520141 QQ{M(Oxidation (M))|F}TS{[TV]|[{I|L}S]}MW;QQ{M(Oxidation (M))|F}TSM{[TV]|[{I|L}S]}W;QQ{M(Oxidation (M))|F}TS[{I|L}A]{M(Oxidation (M))|F}W;QQ{M(Oxidation (M))|F}TAAE{M(Oxidation (M))|F}W;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QTS{[TV]|[{I|L}S]}MW;QQ{M(Oxidation (M))|F}T{[WT]|[RM]}MW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QTSM{[TV]|[{I|L}S]}W;QQ{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}M{[QG]|[NA]};{[CT]|[{M(Oxidation (M))|F}G]}M{[TV]|[{I|L}S]}GMQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QTS[{I|L}A]{M(Oxidation (M))|F}W 4.8071;4.5648;4.0846;3.9963;3.9585;3.855;3.7162;3.6805;3.252;3.236 -;-;-;-;-;-;-;-;-;- 1292 1 2.134 37201.1 1.0 6050 3945 9996 DOHH2_400M_050219_1,9997 DOHH2_400M_050219_1,9997,SLSTFQQMW False False SLSTFQQMW 58.975458 1128.52653807402 2397152.78125 9996.0 ENSG00000188219|ENST00000683005|POTEE;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;;ENSG00000222038|ENST00000409602|POTEJ;;ENSG00000169067|ENST00000423391|ACTBL2;;ENSG00000163017|ENST00000345517|ACTG2;;ENST00000428275.1_1_X:53172047-53172134:-|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000075624|ENST00000646664|ACTB;;ENSG00000196604|ENST00000409914|POTEF;;ENSG00000107796|ENST00000224784|ACTA2;;ENSG00000159251|ENST00000290378|ACTC1;;ENSG00000196834|ENST00000451531|POTEI;;ENSG00000184009|ENST00000573283|ACTG1;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF 5.184136390686035 1.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_1 10002 58.998 446.0 134440.0 25 0 11838.0 + 23464 LTGSASLFI 9 82 908.5086940303006 907.5014175637006 1 908.5074951052666 MULTI CID FTMS 0 0 0 10001 108210.0625 0.7077352289542745 5 -0.0404129028320312 1 Unmodified _LTGSASLFI_ REV__ENST00000405409.6_2_22:36174106-36177783:-|nuORF 46.020951573049366 0.0490941689151868 1 [{I|L}T]GSAS{I|L}{M(Oxidation (M))|F}{I|L} 9 -1 + 38.245 0.0 0.0 4.2143 4.2143 72.953 0.0 0.0 0.0 0.6902215366609141 17.811662064390333 0.6902215366609141 1.746199743006052 0 0.6989700043360187 0.0 1.924742501084005 0.0 [{I|L}T]GSAS{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}T]NTS{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}T]GGTS{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}T]GS{I|L}{[SA]|[TG]}{M(Oxidation (M))|F}{I|L};[{I|L}T]N{I|L}{[MG]|[TS]}{M(Oxidation (M))|F}{I|L};[{I|L}T]GG{I|L}{[MG]|[TS]}{M(Oxidation (M))|F}{I|L};{[SA]|[TG]}R[HK]N[VP] 4.2143;4.0219;3.0012;2.5419;2.3494;1.3288;0.12038 +;-;-;-;-;-;- + 604 1 2.134 47090.7 1.0 6051 3949 10001 DOHH2_400M_050219_1,10002 DOHH2_400M_050219_1,10002,LTGSASLFI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 10003 59.012 800.0 63764.0 25 0 9191.4 + 34355 SLSTFQQMW 9 81 564.2628741773455 1126.5111954214908 2 564.2639648318291 MULTI CID FTMS 0 0 0 10001 96680.7890625 0.9038743667656156 -2 0.0081291198730468 2 Unmodified _SLSTFQQMW_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;ENST00000428275.1_1_X:53172047-53172134:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 16.942295170755138 0.3780752226737986 1 QAW 3 7 23.43 0.0 0.0 2.0799 0.0 0.0 723.3245631966846 0.0 723.3245631966846 0.0 9.383709450590484 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 QAW 2.0799 - 196 + 1 2.134 44258.5 0.7799999713897705 6052 3949 10001 DOHH2_400M_050219_1,10003 DOHH2_400M_050219_1,10003,SLSTFQQMW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 10013 59.053 322.0 105940.0 25 0 4255.1 + 34354 SLSTFQQMW 9 64 1127.5180667785598 1126.51079031196 1 1127.519091784954 MULTI CID FTMS 0 0 0 10012 151173.78125 0.7142380884675515 4 -0.03277587890625 1 Unmodified _SLSTFQQMW_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;ENST00000428275.1_1_X:53172047-53172134:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 61.357469665136826 0.0253304979873734 1 {[CT]|[{M(Oxidation (M))|F}G]}MQ{[WT]|[RM]}TAW 9 7 + 58.65 0.0 0.0 5.2064 5.2064 76.956 0.0 0.0 0.0 0.0 0.0 0.0 2.1611302949092703 0 0.7742275032520141 0.0 1.1307196863200843 0.6747425010840047 {[CT]|[{M(Oxidation (M))|F}G]}MQ{[WT]|[RM]}TAW;{[CT]|[{M(Oxidation (M))|F}G]}AQTS{[TV]|[{I|L}S]}MW;QQ{M(Oxidation (M))|F}TS{[TV]|[{I|L}S]}MW;{[CT]|[{M(Oxidation (M))|F}G]}M{[TV]|[{I|L}S]}SQTAW;{[CT]|[{M(Oxidation (M))|F}G]}AQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QM{[DA]|[EG]};QQ{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QM{[DA]|[EG]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{[WT]|[RM]}QMW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QTS{[TV]|[{I|L}S]}MW;{[CT]|[{M(Oxidation (M))|F}G]}M[AG]{[WT]|[RM]}TAW;{[CT]|[{M(Oxidation (M))|F}G]}{[TV]|[{I|L}S]}MSTQAW 5.2064;5.0145;4.9906;4.7473;4.6562;4.6323;4.6313;4.4347;4.389;4.3487 -;-;-;-;-;-;-;-;-;- 925 + 1 2.134 31038.0 1.0 6053 3958 10012 DOHH2_400M_050219_1,10013 DOHH2_400M_050219_1,10013,SLSTFQQMW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 10017 59.077 800.0 117320.0 25 0 19487.0 + 8515 ETEEDKFLLLY 11 105 700.3531470470036 1398.6917411608072 2 700.3530151247978 MULTI CID FTMS 0 0 0 10016 75456.5703125 0.7419496036573726 -13 0.0769691467285156 1 Unmodified _ETEEDKFLLLY_ ENSG00000136271|ENST00000258772|DDX56;ENST00000446987.5_1_7:44605603-44612175:-|nuORF;nc|ENSG00000136271|Q9NY93-2|DDX56 63.960520009940105 0.0530716371881472 1 [DP]E{[{M(Oxidation (M))|F}D]|MM}K{M(Oxidation (M))|F}{I|L}{I|L}{I|L}Y 11 3 + 62.233 0.0 0.0 4.4494 4.4494 76.421 0.0 0.0 0.0 3.728721920568248 8.64062949022351 3.728721920568248 3.728721920568248 0 0.8935078169319297 1.2218487496163564 2.642159058960253 0.0 [DP]E{[{M(Oxidation (M))|F}D]|MM}K{M(Oxidation (M))|F}{I|L}{I|L}{I|L}Y;{I|L}{I|L}{M(Oxidation (M))|F}KDEE{[ET]|[MV]}{I|L}Y;[DP]E{[{M(Oxidation (M))|F}D]|MM}K{I|L}{M(Oxidation (M))|F}{I|L}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}MDEDK{I|L}{[QN]|[E{I|L}]|[KN]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}MDED{I|L}K{[QN]|[E{I|L}]|[KN]};{I|L}{I|L}[YN]{I|L}EE{[ET]|[MV]}{I|L}Y;{I|L}{I|L}[YN]E{I|L}E{[ET]|[MV]}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}MDE{I|L}DK{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}KDEE{[ET]|[MV]}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}MD{I|L}EDK{[QN]|[E{I|L}]|[KN]} 4.4494;4.1828;4.0372;3.3843;3.2584;3.0574;3.0486;3.0432;3.0374;3.0344 -;-;-;-;-;-;-;-;-;- 1681 1 2.134 74201.4 0.3100000023841858 6054 3961 10016 DOHH2_400M_050219_1,10017 DOHH2_400M_050219_1,10017,ETEEDKFLLLY True True ETEEDKFLLLY 59.076928 700.353015124798 571880.625 10016.0 nc|ENSG00000136271|Q9NY93-2|DDX56;;ENSG00000136271|ENST00000258772|DDX56;;ENST00000446987.5_1_7:44605603-44612175:-|nuORF 7.134024779001872 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 10028 59.121 302.0 340850.0 25 0 67525.0 -1 0 39 938.5497439272028 1875.084934921205 2 939.0544921755792 MULTI CID FTMS 0 0 0 10027 65713.2265625 0.3970101190394153 -5 0.0200767517089843 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 74170.7 1.0 6055 3971 10027 DOHH2_400M_050219_1,10028 DOHH2_400M_050219_1,10028, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 10046 59.202 800.0 107510.0 25 0 24241.0 -1 THIIIIFLMF 10 39 632.361307701644 1262.708062470088 2 632.3614379763603 MULTI CID FTMS 0 0 0 10045 37153.9765625 0.4404359582582674 1 -0.0315666198730468 1 Oxidation (M) _THIIIIFLM(Oxidation (M))F_ ENSG00000184394|ENST00000641086|OR4N5 1.6526216038709556 0.7189921496796233 1 N 1 -1 8.9794 0.0 0.0 0.71112 0.0 0.0 703.3554146202817 442.29720620878834 1145.6526208290702 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 N 0.71112 - 6 + 1 2.134 70055.9 0.3199999928474426 6056 3988 10045 DOHH2_400M_050219_1,10046 DOHH2_400M_050219_1,10046,THIIIIFLMF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 10047 59.216 800.0 14065.0 25 0 2017.8 -1 0 27 1114.364428699017 0 1114.364428699017 PEAK CID FTMS 0 0 0 -1 0 2 1 C 1 -1 3.4949 0.0 0.0 0.15695 0.0 0.0 1067.3296131579966 1053.3502901666627 2120.67990332466 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.15695 - 1 + 1 2.134 19188.5 0.3700000047683716 6057 3988 10045 DOHH2_400M_050219_1,10047 DOHH2_400M_050219_1,10047, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 10051 59.231 210.0 363500.0 25 0 146210.0 + 20616 LLPPPIAPL 9 40 930.602446978034 929.5951705114338 1 930.6070434451104 MULTI CID FTMS 0 0 0 10050 151393.078125 0.1469284906422822 -52 0.2882156372070312 1 Unmodified _LLPPPIAPL_ ENSG00000136378|ENST00000388820|ADAMTS7 20.871210003555333 0.2717241269066626 1 PPP 3 6 13.288 0.0 0.0 1.4295 0.0 0.0 226.16717619984007 409.2440279596313 635.4112041594714 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + PPP 1.4295 + + 8 + 1 2.134 55639.5 1.0 6058 3991 10050 DOHH2_400M_050219_1,10051 DOHH2_400M_050219_1,10051,LLPPPIAPL False True LLPPPIAPL 59.230666 930.60704344511 11975707.0 10050.0 ENSG00000136378|ENST00000388820|ADAMTS7 1.0286286075909932 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_1 10078 59.347 800.0 50836.0 25 0 2360.6 -1 0 65 1188.2170937963288 3561.6294519891862 3 1188.553393542767 MULTI CID FTMS 0 0 0 10077 65077.33984375 0.4307981187393236 -13 0.0522880554199218 1 1 VQY{M(Oxidation (M))|F}ANQ[QA][CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 14 -1 35.371 0.0 0.0 0.99313 0.0 0.0 1931.913142712216 0.0 1931.913142712216 0.0 24.40236967123205 0.0 0.0 0 0.0 0.0 0.0 0.0 VQY{M(Oxidation (M))|F}ANQ[QA][CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 0.99313 - 279 + 1 2.134 33725.7 0.3499999940395355 6059 4017 10077 DOHH2_400M_050219_1,10078 DOHH2_400M_050219_1,10078, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 10079 59.357 560.0 73225.0 25 0 4943.9 7348 EGAALSLSSPD 11 55 1046.5040518784483 1045.4967754118484 1 1046.508959949017 MULTI CID FTMS 0 0 0 10077 69012.9609375 0.6255189284845083 -10 0.0401039123535156 2 Unmodified _EGAALSLSSPD_ ENSG00000007545|ENST00000397412|CRAMP1 31.26834338654808 0.3580123756476716 1 [{I|L}T]DST{I|L}S{M(Oxidation (M))|F}Y 9 9 + 59.892 0.0 0.0 5.7286 5.7286 84.582 0.0 0.0 0.0 0.3631035033832503 16.13212724799766 0.3631035033832503 7.390690719683093 0 0.7614393726401688 0.0 1.924742501084005 0.0 [{I|L}T]DST{I|L}S{M(Oxidation (M))|F}Y;[QA]ES{I|L}TSD[VP];[{I|L}T]DSTS{I|L}{M(Oxidation (M))|F}Y;[{I|L}T]{I|L}DTSS{M(Oxidation (M))|F}Y;[{I|L}T]D{I|L}TSS{M(Oxidation (M))|F}Y;[{I|L}T]VETSS{M(Oxidation (M))|F}Y;[QA]E{I|L}STSD[VP];[QA]ESSTD{I|L}[VP];[QA]ESST{I|L}D[VP];[QA]{I|L}ESTSD[VP] 5.7286;5.0217;4.9017;4.7124;4.4244;4.3318;4.1948;4.0055;3.7175;3.6691 -;-;-;-;-;-;-;-;-;- 712 1 2.134 35835.7 1.0 6060 4017 10077 DOHH2_400M_050219_1,10079 DOHH2_400M_050219_1,10079,EGAALSLSSPD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 10091 59.414 800.0 192500.0 25 0 36131.0 -1 0 66 938.5500847944394 1875.085616655679 2 939.0502807497978 MULTI CID FTMS 0 0 0 10090 89431.7734375 0.6500682138311663 15 -0.1214714050292968 1 1 N 1 -1 6.9897 0.0 0.0 0.37277 0.0 0.0 822.3560767160287 935.6396578424436 1757.9957345584723 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.37277 - 5 + 1 2.134 107109.6 0.8399999737739563 6061 4028 10090 DOHH2_400M_050219_1,10091 DOHH2_400M_050219_1,10091, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 10095 59.438 766.0 191700.0 25 0 111050.0 -1 0 30 730.5034737641283 729.4961972975283 1 730.5030395388603 MULTI CID FTMS 0 0 0 10094 143149.84375 0.3397228713288579 43 -0.2218017578125 1 1 C(Carbamidomethyl (C)) 1 -1 6.9897 0.0 0.0 0.95815 0.0 0.0 207.2975411469408 359.1424349420532 566.439976088994 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.95815 - 2 + 1 2.134 107869.2 1.0 6062 4031 10094 DOHH2_400M_050219_1,10095 DOHH2_400M_050219_1,10095, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 10098 59.458 800.0 21647.0 25 0 2196.1 -1 0 43 978.7775756716728 0 978.7775756716728 PEAK CID FTMS 0 0 0 -1 0 1 1 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.134 23316.8 0.9300000071525574 6063 4033 10097 DOHH2_400M_050219_1,10098 DOHH2_400M_050219_1,10098, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 10102 59.483 800.0 124990.0 25 0 11591.0 + 27229 PGLSSALLL 9 93 870.5294410632767 869.5221645966767 1 870.5290405154228 MULTI CID FTMS 0 0 0 10101 97822.9609375 0.1988825236344696 39 -0.1816444396972656 1 Unmodified _PGLSSALLL_ REV__ENSG00000164318|ENST00000322350|EGFLAM;REV__nc|ENSG00000164318|Q63HQ2|EGFLAM 60.38955033654506 0.025866396858536 1 SSA{I|L}{I|L}{I|L} 6 -1 49.73 0.0 0.0 5.7192 0.0 0.0 267.15831191230626 0.0 267.15831191230626 0.0 27.17584314246004 0.0 0.0 0 0.2742275032520141 0.0 1.885151878060192 0.0 SSA{I|L}{I|L}{I|L} 5.7192 + + 276 1 2.134 70727.0 0.3400000035762787 6064 4036 10101 DOHH2_400M_050219_1,10102 DOHH2_400M_050219_1,10102,PGLSSALLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 10107 59.511 800.0 39964.0 25 0 8997.2 -1 0 39 1039.9918809324374 0 1039.992724597454 PEAK CID FTMS 0 0 0 10106 23386.873046875 0.273780618801393 1 -0.0164070129394531 1 1 D 1 -1 6.9897 0.0 0.0 0.33637 0.0 0.0 1804.8575889139 155.06167017154533 1959.9192590854448 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.33637 - 2 + 1 2.134 28894.4 0.3700000047683716 6065 4040 10106 DOHH2_400M_050219_1,10107 DOHH2_400M_050219_1,10107, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 10146 59.676 800.0 68151.0 25 0 7697.0 + 22249 LPRKRRTL 8 66 520.3471742114331 1038.679795489666 2 520.3472778201103 MULTI CID FTMS 0 0 0 10145 72889.703125 0.6743826754465222 -7 0.028076171875 1 Unmodified _LPRKRRTL_ REV__ENST00000606584.5_1_13:79980478-79992024:+|nuORF 32.116972079565 0.368454113111938 1 [{I|L}T]{I|L}R[{I|L}P]{I|L}T{I|L} 9 -1 + 64.6 0.0 0.0 6.2194 6.2194 94.169 0.0 0.0 0.0 20.737862141609185 44.67802475701326 20.737862141609185 64.59954981438067 0 1.548455006504028 2.0 0.7742275032520141 0.0 [{I|L}T]{I|L}R[{I|L}P]{I|L}T{I|L} 6.2194 - 42 1 2.134 49032.5 0.9300000071525574 6066 4078 10145 DOHH2_400M_050219_1,10146 DOHH2_400M_050219_1,10146,LPRKRRTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_1 10150 59.699 610.0 178600.0 25 0 66058.0 + 20624 LLPPPPLLA 9 56 930.602446978034 929.5951705114338 1 932.607958972454 MULTI CID FTMS 0 0 0 10149 139878.21875 0.7262885666620936 27 -0.1193122863769531 1 Unmodified _LLPPPPLLA_ ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2 9.347437153973935 0.588369872918737 1 [KP]PP 4 6 10.177 0.0 0.0 1.0948 0.0 0.0 0.0 507.3017378493845 507.3017378493845 -3.807196863200844 0.0 -3.807196863200844 0.0 0 0.0 0.0 0.0 0.0 [KP]PP 1.0948 - 19 + 1 2.134 78859.9 1.0 6067 4081 10149 DOHH2_400M_050219_1,10150 DOHH2_400M_050219_1,10150,LLPPPPLLA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_1 10196 59.887 462.0 100750.0 25 0 7116.4 + 23960 LVSDSALYF 9 75 1014.5141532224133 1013.5068767558132 1 1014.515490710735 MULTI CID FTMS 0 0 0 10195 95841.40625 0.9709814449994578 5 -0.027099609375 1 Unmodified _LVSDSALYF_ nc|ENSG00000211777|A0A0B4J244|TRAV3 50.855029805455786 0.0384952370514206 1 [{I|L}V]SADS{I|L}{M(Oxidation (M))|F}Y 9 4 + 58.449 0.0 0.0 5.767 5.767 76.627 0.0 0.0 0.0 1.6736872090565953 16.478174818886373 1.6736872090565953 0.3357551167652985 0 0.5 0.0 2.217900182820548 0.0 [{I|L}V]SADS{I|L}{M(Oxidation (M))|F}Y;[{I|L}V]SDSA{I|L}{M(Oxidation (M))|F}Y;[{I|L}V]SDAS{I|L}{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}DASV{I|L}{M(Oxidation (M))|F}Y;[{I|L}V]SADTV{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}VADS{I|L}{M(Oxidation (M))|F}Y;[{I|L}V]SDATV{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}DAS{I|L}V{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}VDSA{I|L}{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}VDAS{I|L}{M(Oxidation (M))|F}Y 5.767;5.7339;5.6197;5.6018;5.4345;5.2962;5.2872;5.2694;5.2631;5.1489 -;-;-;-;-;-;-;-;-;- 1022 1 2.134 38981.6 1.0 6068 4126 10195 DOHH2_400M_050219_1,10196 DOHH2_400M_050219_1,10196,LVSDSALYF True True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_1 10203 59.92 562.0 7446.1 25 0 1135.0 -1 0 14 1123.2666303853207 0 1123.257983386517 PEAK CID FTMS 0 0 0 -1 0 1 1 H 1 -1 5.4846 0.0 0.0 0.24435 0.0 0.0 1378.6024613548227 725.8510836236936 2104.453544978516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.24435 - 1 + 1 2.134 15423.1 1.0 6069 4132 10202 DOHH2_400M_050219_1,10203 DOHH2_400M_050219_1,10203, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_1 10214 59.973 800.0 13023.0 25 0 866.47 -1 0 29 1159.547778308392 0 1159.547778308392 PEAK CID FTMS 0 0 0 -1 0 1 1 G 1 -1 6.9897 0.0 0.0 0.30166 0.0 0.0 774.3783192126842 1482.6905079606809 2257.068827173365 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.30166 - 2 + 1 2.134 18106.3 0.2899999916553497 6070 4142 10213 DOHH2_400M_050219_1,10214 DOHH2_400M_050219_1,10214, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 487 1.9612 301.0 152790.0 25 0 41987.0 10220 FQKFDYLFF 9 56 418.8796974437847 0 419.3152953982353 PEAK CID FTMS 0 0 0 486 14175.42578125 0.465592027489222 55 -0.2250862121582031 1 Unmodified _FQKFDYLFF_ chr2:88747705-88749981|15|13.6|0.05|8.2|+|0|TE_info:L1PB1,L1PB1_dup1209,L1,LINE,donor,-,88745221,88747705|None,RPIA|18 0.2690200627634905 0.3444685223463734 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.291 45077.0 1.0 0 485 486 DOHH2_400M_050219_2,487 DOHH2_400M_050219_2,487,FQKFDYLFF False False False False TE_chimeric_transcript PXD020620_cell_line DOHH2_400M_050219_2 1054 4.2503 800.0 37204.0 25 0 23948.0 -1 YAQRKWYTM 9 24 631.8033727475826 0 631.8024780154228 PEAK CID FTMS 0 0 0 1053 41677.8359375 0.5102417773538805 1 -0.0163769721984863 1 Oxidation (M) _YAQRKWYTM(Oxidation (M))_ ENSG00000176422|ENST00000338146|SPRYD4 0.6014990680409731 0.3444685223463735 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.291 30086.2 0.3499999940395355 1 1051 1053 DOHH2_400M_050219_2,1054 DOHH2_400M_050219_2,1054,YAQRKWYTM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 1287 5.1962 800.0 81290.0 25 0 33057.0 + -1 TEIFLTMSLTM 11 56 434.8820510555268 0 434.8820068240166 PEAK CID FTMS 0 0 0 1286 132686.46875 0.8804093707304945 -117 0.4712285995483398 1 Oxidation (M) _TEIFLTM(Oxidation (M))SLTM_ REV__ENST00000296315.7_1_3:56762359-56762437:-|nuORF 0.0 0.4761840153648598 2 {M(Oxidation (M))|F} 1 -1 0.59593 0.0 0.0 0.068676 0.0 0.0 657.8066913671099 59.8811853998168 717.6878767669267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.068676 + + 1 + 1 1.291 60384.3 0.3600000143051147 2 1283 1286 DOHH2_400M_050219_2,1287 DOHH2_400M_050219_2,1287,TEIFLTMSLTM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 1413 5.7123 800.0 69042.0 25 0 47061.0 3450 CERERERER 9 38 631.8033939073905 0 631.8035156130791 PEAK CID FTMS 0 0 0 1412 95778.6015625 0.3670993528272672 -292 1.188270092010498 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 2 D 1 9 1.5938 0.0 0.0 0.12633 0.0 0.0 627.980126582556 515.5754488580686 1143.5555754406246 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.12633 - 1 + 1 1.291 47645.4 0.4000000059604645 3 1408 1412 DOHH2_400M_050219_2,1413 DOHH2_400M_050219_2,1413,CERERERER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 1433 5.7995 714.0 97641.0 25 0 53112.0 37043 TGCCCGEG 8 57 365.10508629266303 0 365.1051818728447 PEAK CID FTMS 0 0 0 1432 100336.0078125 0.6605345126083674 -22 0.1007513999938964 1 Unmodified _TGCCCGEG_ ENST00000505490.2_1_17:79845733-79845814:-|nuORF 0.6903765706972694 0.5983587967854751 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.291 60846.0 1.0 4 1427 1432 DOHH2_400M_050219_2,1433 DOHH2_400M_050219_2,1433,TGCCCGEG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 1833 7.4111 386.0 325050.0 25 0 51607.0 + 11962 GPEAGRKPA 9 91 441.7432094212893 881.4718659093785 2 441.7428771853447 MULTI CID FTMS 0 0 0 1832 260681.59375 0.047385237874512 -3 0.0121769905090332 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 70.33199760932243 0.0209706178985989 2 GPEASV 6 5 80.482 0.0 0.0 9.1305 0.0 0.0 0.0 338.19455896549067 338.19455896549067 35.1498340313868 0.0 0.0 0.0 0 1.424742501084005 2.0 1.2614393726401687 0.0 GPEASV 9.1305 - 424 + 1 1.291 101041.3 1.0 5 1826 1832 DOHH2_400M_050219_2,1833 DOHH2_400M_050219_2,1833,GPEAGRKPA True True GPEAGRKPA 7.4111242 441.742877185345 91442768.0 1832.0 nc|ENSG00000204469|P48634-3|PRRC2A;;ENSG00000204469|ENST00000376033|PRRC2A;;nc|ENSG00000204469|P48634-2|PRRC2A 4.99522606531779 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 1834 7.4205 536.0 400250.0 25 0 36380.0 + -1 SRGEHRQDRRERPY 14 99 461.2356551780388 1840.913514845756 4 461.2350952029228 MULTI CID FTMS 0 0 0 1832 122286.6640625 0.1202676631506298 -5 0.020120620727539 2 ENSG00000089280|ENST00000254108|FUS;ENST00000483853.1_1_16:31202042-31202756:+|nuORF;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 2 RRVW{M(Oxidation (M))|F}{I|L} 6 -1 33.237 0.0 0.0 1.8055 0.0 0.0 965.4404846176208 0.0 965.4404846176208 0.0 12.078343878162343 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.3807196863200844 RRVW{M(Oxidation (M))|F}{I|L} 1.8055 - 116 + 1 1.291 166136.5 1.0 6 1826 1832 DOHH2_400M_050219_2,1834 DOHH2_400M_050219_2,1834, False False SRGEHRQDRRERPY 7.4205449 461.235095202923 8670777.0 1832.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000483853.1_1_16:31202042-31202756:+|nuORF;;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 7.854082425435384 4.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 1835 7.4344 800.0 354650.0 25 0 59834.0 + -1 KGEHRQERRDRPY 13 92 576.2994164518582 1725.8764199557745 3 576.2995483279228 MULTI CID FTMS 0 0 0 1832 80670.703125 0.1761493700120566 -6 0.0241789817810058 3 nc|ENSG00000182944|Q01844-6|EWSR1;ENST00000469669.5_1_22:29688055-29696148:+|nuORF;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;ENST00000479135.5_1_22:29687437-29696148:+|nuORF;nc|ENSG00000182944|Q01844-2|EWSR1;ENST00000483629.5_1_22:29695128-29696148:+|nuORF;ENSG00000182944|ENST00000397938|EWSR1 2 YDRDRR 6 -1 66.988 0.0 0.0 3.8814 0.0 0.0 0.0 861.3945920577147 861.3945920577147 37.29486901908295 0.0 0.0 0.0 0 1.805462187404089 0.0 0.0 1.2302046884880935 YDRDRR 3.8814 - 186 + 1 1.291 210323.5 0.3400000035762787 7 1826 1832 DOHH2_400M_050219_2,1835 DOHH2_400M_050219_2,1835, False False KGEHRQERRDRPY 7.434376 576.299548327923 13444392.0 1832.0 nc|ENSG00000182944|Q01844-6|EWSR1;;ENST00000469669.5_1_22:29688055-29696148:+|nuORF;;nc|ENSG00000182944|Q01844-5|EWSR1;;nc|ENSG00000182944|Q01844-3|EWSR1;;ENST00000479135.5_1_22:29687437-29696148:+|nuORF;;nc|ENSG00000182944|Q01844-2|EWSR1;;ENST00000483629.5_1_22:29695128-29696148:+|nuORF;;ENSG00000182944|ENST00000397938|EWSR1 8.210476875305176 3.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 1838 7.4432 100.0 775940.0 25 0 55246.0 -1 0 69 432.4765546941222 1725.877112910089 4 432.4764892458916 MULTI CID FTMS 0 0 0 1837 426266.65625 0.7467103602889985 -3 0.0408334732055664 1 2 QW 2 -1 27.959 0.0 0.0 1.62 0.0 0.0 0.0 1408.6967559079128 1408.6967559079128 16.365006360318688 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 QW 1.62 - 16 + 1 1.592 72965.2 1.0 8 1828 1837 DOHH2_400M_050219_2,1838 DOHH2_400M_050219_2,1838, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 1839 7.4479 251.0 241160.0 25 0 11840.0 + -1 EFIMDQQQG 9 97 556.2416793783163 1110.4688058234326 2 556.2418090701103 MULTI CID FTMS 0 0 0 1837 420119.3125 1.0 0 0.0 2 Oxidation (M) _EFIM(Oxidation (M))DQQQG_ REV__ENSG00000076382|ENST00000321765|SPAG5 19.256988751693697 0.3154191944385105 2 [AG]DAHEAGAQ{[QG]|[NA]} 12 -1 + 74.787 0.0 0.0 6.7347 6.7347 79.013 0.0 0.0 0.0 7.133985850288127 7.447274948966935 7.133985850288127 0.5681094537576712 0 0.5 2.0 1.7104093769761877 0.0 [AG]DAHEAGAQ{[QG]|[NA]};[AG]AHDEAGAQ{[QG]|[NA]};[AG]DAHEAQQ{[QG]|[NA]};[AG]AHDEAQQ{[QG]|[NA]};[AG]ADHEAGAQ{[QG]|[NA]};[AG]DAHEQAQ{[QG]|[NA]};[AG]ADHEAQQ{[QG]|[NA]};{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQ{[QG]|[NA]};[AG]AHDEQAQ{[QG]|[NA]};[AG]GEHEAGAQ{[QG]|[NA]} 6.7347;6.6836;6.569;6.5178;6.2614;6.1393;6.0957;6.0923;6.0882;6.0244 -;-;-;-;-;-;-;-;-;- 974 1 1.592 48051.8 1.0 9 1828 1837 DOHH2_400M_050219_2,1839 DOHH2_400M_050219_2,1839,EFIMDQQQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 1840 7.4507 139.0 223280.0 25 0 16547.0 + 11991 GPEVQQTR 8 63 457.73794203153807 913.4613311298762 2 457.7379943728447 MULTI CID FTMS 0 0 0 1837 317041.875 1.0 0 0.0 3 Unmodified _GPEVQQTR_ REV__ENST00000491547.1_1_1:14925349-15387014:+|nuORF 9.347437153973935 0.7675937258251505 2 [PG]E 3 -1 24.181 0.0 0.0 2.6472 0.0 0.0 0.0 627.3204979602074 627.3204979602074 13.212112250009652 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [PG]E 2.6472 + + 19 1 1.592 29537.6 1.0 10 1828 1837 DOHH2_400M_050219_2,1840 DOHH2_400M_050219_2,1840,GPEVQQTR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 1841 7.4556 268.0 201050.0 25 0 19611.0 -1 NEQRMKAAEK 10 83 407.5387353656845 1219.5943766972534 3 407.5381652712822 MULTI CID FTMS 0 0 0 1837 184190.96875 0.535397083385299 -2 0.0367751121520996 4 Oxidation (M) _NEQRM(Oxidation (M))KAAEK_ ENSG00000075856|ENST00000546815|SART3;nc|ENSG00000075856|Q15020-4|SART3 14.218169984304629 0.6089749286722269 2 HVDAAEK 7 -1 29.289 0.0 0.0 2.4015 0.0 0.0 451.2192207834434 0.0 451.2192207834434 0.0 2.4559987587058103 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3054621874040891 HVDAAEK 2.4015 - 333 + 1 1.592 52700.4 1.0 11 1828 1837 DOHH2_400M_050219_2,1841 DOHH2_400M_050219_2,1841,NEQRMKAAEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 1842 7.4695 800.0 166800.0 25 0 20736.0 -1 0 59 614.6453199520002 1840.9141304562008 3 614.6464111208916 MULTI CID FTMS 0 0 0 1837 162209.578125 0.5763583661631527 -1 0.0040645599365234 5 2 YP 2 -1 16.454 0.0 0.0 0.89378 0.0 0.0 1562.7920082938265 0.0 1562.7920082938265 0.0 13.68944035183194 0.0 0.0 0 0.0 0.0 0.0 0.0 YP 0.89378 - 14 1 1.592 102155.2 0.6299999952316284 12 1828 1837 DOHH2_400M_050219_2,1842 DOHH2_400M_050219_2,1842, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 1843 7.4833 800.0 105450.0 25 0 19914.0 + -1 GVPCTCAQWCG 11 88 591.231323207981 1180.4480934827618 2 591.2313110232353 MULTI CID FTMS 0 0 0 1837 86168.4375 0.4006545277910951 -3 0.0408334732055664 6 Carbamidomethyl (C) _GVPCTCAQWC(Carbamidomethyl (C))G_ REV__ENSG00000162591|ENST00000356575|MEGF6;REV__nc|ENSG00000162591|O75095-2|MEGF6 3.5964929083625545 0.858179447565866 2 KPESER 6 -1 36.107 0.0 0.0 3.0588 0.0 0.0 436.0739955410051 0.0 436.0739955410051 0.0 29.11745028500839 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 KPESER 3.0588 - 71 + 1 1.592 68368.1 0.4699999988079071 13 1828 1837 DOHH2_400M_050219_2,1843 DOHH2_400M_050219_2,1843,GVPCTCAQWCG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 1844 7.4877 234.0 368760.0 25 0 80480.0 -1 0 94 439.23136427133903 438.22408780473904 1 439.2304870486259 MULTI CID FTMS 0 0 0 1837 172702.84375 0.8704681713539035 1 -0.0492558479309082 7 2 [YT]R 3 -1 + 40.168 0.0 0.0 9.1661 9.1661 98.402 0.0 0.0 0.0 5.502287106951791 5.502287106951791 5.502287106951791 35.731074559755164 0 0.3807196863200844 1.3979400086720375 0.0 0.1923877696554315 [YT]R;[VP][HS] 9.1661;1.0125 -;- 25 + 1 1.592 76605.8 1.0 14 1828 1837 DOHH2_400M_050219_2,1844 DOHH2_400M_050219_2,1844, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 1846 7.5023 695.0 145090.0 25 0 26273.0 26958 PECERRPSICL 11 119 434.88207165043445 0 434.8822814822197 PEAK CID FTMS 0 0 0 1845 83340.9375 0.4248479607884118 34 -0.2091588973999023 1 Unmodified _PECERRPSICL_ ENST00000522621.1_2_8:62044343-62212351:+|nuORF 5.731851221503515 0.47618401536486 2 E 1 10 5.0886 0.0 0.0 0.58642 0.0 0.0 433.5631412483314 302.11310754947505 735.6762487978065 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 + E 0.58642 + + 2 + 1 1.592 87353.6 1.0 15 1829 1845 DOHH2_400M_050219_2,1846 DOHH2_400M_050219_2,1846,PECERRPSICL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 1847 7.5068 244.0 277980.0 25 0 16626.0 + 36762 TEDDKRRNY 9 113 399.52684824995833 1195.558715350075 3 399.5269348025322 MULTI CID FTMS 0 0 0 1845 121569.3984375 1.0 0 0.0 2 Unmodified _TEDDKRRNY_ ENSG00000235162|ENST00000443585|C12orf75 16.565877749689598 0.3882643987948875 2 TEDDY 5 4 63.443 0.0 0.0 5.3066 0.0 0.0 0.0 569.3251796705156 569.3251796705156 52.02336695665503 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 TEDDY 5.3066 - 75 + 1 1.592 58497.6 1.0 16 1829 1845 DOHH2_400M_050219_2,1847 DOHH2_400M_050219_2,1847,TEDDKRRNY False True TEDDKRRNY 7.5068379 399.526934802532 1118180.5 1845.0 ENSG00000235162|ENST00000443585|C12orf75 3.993848641713461 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 1848 7.5118 269.0 288420.0 25 0 12326.0 + 11432 GGYAGQSL 8 143 376.68125391738704 751.3479549015741 2 376.6817504763603 MULTI CID FTMS 0 0 0 1845 104778.9375 0.7971541468146415 -2 0.0533204078674316 3 Unmodified _GGYAGQSL_ REV__ENSG00000178188|ENST00000684370|SH2B1;REV__ENST00000569471.1_1_16:28880556-28883354:+|nuORF;REV__nc|ENSG00000178188|Q9NRF2-2|SH2B1;REV__nc|ENSG00000178188|Q9NRF2-3|SH2B1 18.13498045792455 0.6430038125133779 2 [YN]QEAK 6 -1 + 51.677 0.0 0.0 6.8779 6.8779 91.231 0.0 0.0 0.0 28.11854012831069 16.852522361103787 16.852522361103787 9.420080530223132 0 0.0 2.0 0.7059771852360797 0.9545391030138068 [YN]QEAK;[YN][AG]EAK;[YN]V[DN]K;[YN]VG[DG]K;[YN]V[QT]Q;[YN]VG[TA]Q;[YN]Q{[TV]|[{I|L}S]}Q;[YN]VG[NS]V;[YN]Q[QT]V;[YN]VSAAQ 6.8779;5.6241;5.1193;4.9248;4.1288;3.9343;3.8282;3.7741;3.668;3.6391 -;-;-;-;-;-;-;-;-;- 288 + 1 1.592 64581.1 1.0 17 1829 1845 DOHH2_400M_050219_2,1848 DOHH2_400M_050219_2,1848,GGYAGQSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 1851 7.522 185.0 339420.0 25 0 15611.0 36693 TDAVIHGG 8 114 385.1964182995442 0 385.1959411501884 PEAK CID FTMS 0 0 0 1850 67221.625 0.6898320822978411 1 -0.0199432373046875 1 Unmodified _TDAVIHGG_ ENSG00000181518|ENST00000641687|OR8D4 5.760428011301431 0.5786759180849727 2 {I|L} 1 7 6.9897 0.0 0.0 0.90967 0.0 0.0 216.06598005436348 436.2054537408813 652.2714337952448 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.90967 + + 10 + 1 1.96 59223.1 1.0 18 1831 1850 DOHH2_400M_050219_2,1851 DOHH2_400M_050219_2,1851,TDAVIHGG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 1852 7.5358 800.0 93408.0 25 0 6266.9 -1 RQQMKDAAVSA 11 97 610.8044873642928 1219.5944217953854 2 610.8046752810478 MULTI CID FTMS 0 0 0 1850 85907.28125 1.0 0 0.0 2 Oxidation (M) _RQQM(Oxidation (M))KDAAVSA_ ENSG00000141556|ENST00000355528|TBCD;ENST00000571796.5_1_17:80869637-80887508:+|nuORF;nc|ENSG00000141556|Q9BTW9-4|TBCD;nc|ENSG00000141556|Q9BTW9-5|TBCD 24.881564428377168 0.5079759154518888 2 [VS]AGHHVDAAEK 12 -1 + 93.808 0.0 0.0 7.6917 7.6917 88.968 0.0 0.0 0.0 18.83030193062976 16.611814434466197 16.611814434466197 7.096364499506478 0 2.9604093769761874 1.6989700043360187 0.3494850021680094 0.0 [VS]AGHHVDAAEK;[VS]QHHVDAAEK;[VS]AGSASKDAAEK;[VS]AGHHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHHVDAAEK;[VS]QSASKDAAEK;[VS]AG[MN]KDAAEK;[SG]{I|L}GHHVDAAEK;[VS]AGHHVD[RD]K;[VS]QHHVD[DV]GK 7.6917;7.1099;6.4474;6.2961;6.1478;5.8631;5.8234;5.7765;5.7539;5.7142 -;-;-;-;-;-;-;-;-;- 1616 1 1.96 62978.0 0.4799999892711639 19 1831 1850 DOHH2_400M_050219_2,1852 DOHH2_400M_050219_2,1852,RQQMKDAAVSA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 1856 7.5601 800.0 119510.0 25 0 12012.0 -1 0 67 485.7280631980871 1938.8831469259485 4 485.9785949587822 MULTI CID FTMS 0 0 0 1855 75123.96875 0.9497906846340504 1 -0.0163536071777343 1 2 QD 2 -1 14.693 0.0 0.0 0.75779 0.0 0.0 1677.844426026879 0.0 1677.844426026879 0.0 1.928527761275128 0.0 0.0 0 0.0 0.0 0.0 0.0 QD 0.75779 - 40 1 1.96 82689.7 0.449999988079071 20 1834 1855 DOHH2_400M_050219_2,1856 DOHH2_400M_050219_2,1856, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 1859 7.5806 800.0 125930.0 25 0 32037.0 -1 0 55 992.2977951111736 0 992.2957641482352 PEAK CID FTMS 0 0 0 1858 59199.82421875 0.5977488193250394 1 -0.0164041519165039 1 2 C(Carbamidomethyl (C)) 1 -1 6.9897 0.0 0.0 0.35256 0.0 0.0 1398.4561726424658 421.0811861627563 1819.537358805222 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.35256 - 6 + 1 1.96 74171.5 0.4000000059604645 21 1836 1858 DOHH2_400M_050219_2,1859 DOHH2_400M_050219_2,1859, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 1879 7.6578 33.0 1796600.0 25 0 257690.0 + 11963 GPEAGRKPA 9 78 441.7432094212893 881.4718659093785 2 441.7432433962822 MULTI CID FTMS 0 0 0 1878 1876377.375 0.3410773540919687 26 -0.1447658538818359 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 56.17704186161178 0.0281986971544335 2 GPEA 4 5 66.67 0.0 0.0 7.5635 0.0 0.0 0.0 524.2939284391696 524.2939284391696 52.44509333441371 0.0 0.0 0.0 0 1.274227503252014 2.0 0.5 0.0 + GPEA 7.5635 + + 66 + 1 2.191 51794.5 1.0 22 1855 1878 DOHH2_400M_050219_2,1879 DOHH2_400M_050219_2,1879,GPEAGRKPA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 1882 7.6664 78.0 797610.0 25 0 73125.0 -1 0 53 461.2356551780388 1840.913514845756 4 461.2354003787041 MULTI CID FTMS 0 0 0 1881 415995.3125 0.4091270663039802 26 -0.1440448760986328 1 2 G 1 -1 5.4846 0.0 0.0 0.29793 0.0 0.0 1238.625808402199 542.2353609674436 1780.8611693696423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.29793 - 4 + 1 2.191 55510.3 1.0 23 1857 1881 DOHH2_400M_050219_2,1882 DOHH2_400M_050219_2,1882, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 1884 7.6784 535.0 269190.0 25 0 43578.0 -1 0 71 576.2994164518582 1725.8764199557745 3 576.6340820193291 MULTI CID FTMS 0 0 0 1883 124809.0703125 0.2650170912188148 29 -0.1553277969360351 1 2 YDRD 4 -1 46.67 0.0 0.0 2.7041 0.0 0.0 0.0 1173.5962719125146 1173.5962719125146 40.24350030035414 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.4247425010840047 YDRD 2.7041 - 63 + 1 2.191 112973.4 1.0 24 1858 1883 DOHH2_400M_050219_2,1884 DOHH2_400M_050219_2,1884, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 1889 7.6969 195.0 415730.0 25 0 38548.0 -1 0 70 432.4765546941222 1725.877112910089 4 432.7272216677666 MULTI CID FTMS 0 0 0 1888 189953.171875 0.3653733449255765 31 -0.1555385589599609 1 2 KW 2 -1 20.969 0.0 0.0 1.215 0.0 0.0 0.0 1408.6924614675995 1408.6924614675995 13.979400086720377 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KW 1.215 - 18 + 1 2.292 79538.1 1.0 25 1862 1888 DOHH2_400M_050219_2,1889 DOHH2_400M_050219_2,1889, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 1891 7.7132 800.0 101640.0 25 0 4525.9 + -1 GADAMAEVFNA 11 128 556.2416793783163 1110.4688058234326 2 556.2414428591728 MULTI CID FTMS 0 0 0 1890 141425.9375 0.3366327928569101 35 -0.169405460357666 1 Oxidation (M) _GADAM(Oxidation (M))AEVFNA_ REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1 39.94969957227396 0.2131707853268865 2 {[DA]|[EG]}QHEAGAQNA 11 -1 + 78.564 0.0 0.0 7.0749 7.0749 82.74 0.0 0.0 0.0 2.879624178048118 7.325002304007228 2.879624178048118 2.879624178048118 0 0.9204841662593096 0.744727494896694 1.1889307197995391 0.9802046884880936 {[DA]|[EG]}QHEAGAQNA;[AG]DAHEAGAQNA;[AG]DAHEAQQNA;{[DA]|[EG]}QHEAQQNA;[AG]DAHEQAQNA;{[QG]|[NA]}EHEAGAQNA;{[DA]|[EG]}GAHEAGAQNA;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQNA;[AG]ADHEAGAQNA;[AG]GEHEAGAQNA 7.0749;6.8156;6.6498;6.5695;6.563;6.5551;6.4729;6.3769;6.317;6.317 -;-;-;-;-;-;-;-;-;- 1573 1 2.292 64770.0 0.4799999892711639 26 1863 1890 DOHH2_400M_050219_2,1891 DOHH2_400M_050219_2,1891,GADAMAEVFNA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 1893 7.7209 279.0 196290.0 25 0 19585.0 + 35649 SVDARMREEK 10 87 407.5387353656845 1219.5943766972534 3 407.5382873415947 MULTI CID FTMS 0 0 0 1892 103101.234375 0.2996895046071532 34 -0.1530284881591797 1 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 13.90604991867851 0.6142120002215601 2 [VS]A 3 -1 22.192 0.0 0.0 1.8196 0.0 0.0 0.0 959.4339512424284 959.4339512424284 1.002701750854655 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]A 1.8196 - 138 1 2.292 50203.4 1.0 27 1864 1892 DOHH2_400M_050219_2,1893 DOHH2_400M_050219_2,1893,SVDARMREEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 1905 7.7776 800.0 117970.0 25 0 30426.0 + 6009 DRYLYKQTTD 10 93 434.88207165043445 0 434.8822814822197 PEAK CID FTMS 0 0 0 1904 90994.796875 0.4638651190442812 80 -0.3743481636047363 1 Unmodified _DRYLYKQTTD_ REV__ENSG00000171466|ENST00000453372|ZNF562 3.2813086475875832 0.3961065659209837 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.351 81471.6 0.4399999976158142 28 1875 1904 DOHH2_400M_050219_2,1905 DOHH2_400M_050219_2,1905,DRYLYKQTTD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 1939 7.9123 174.0 293810.0 25 0 41461.0 + 11964 GPEAGRKPA 9 66 441.7432094212893 881.4718659093785 2 441.7430908083916 MULTI CID FTMS 0 0 0 1938 329187.28125 0.0598378174803342 79 -0.4200620651245117 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 39.94969957227396 0.0757326808254658 2 GPEAS 5 5 69.993 0.0 0.0 7.9404 0.0 0.0 0.0 437.2655123346313 437.2655123346313 51.71980528870879 0.0 0.0 0.0 0 1.6549471895720984 2.0 0.0 0.0 GPEAS 7.9404 - 77 + 1 2.351 46481.7 1.0 29 1908 1938 DOHH2_400M_050219_2,1939 DOHH2_400M_050219_2,1939,GPEAGRKPA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 1942 7.9239 272.0 223010.0 25 0 16901.0 -1 0 62 461.2356551780388 1840.913514845756 4 461.2354919314384 MULTI CID FTMS 0 0 0 1941 133577.375 0.1313719600105749 79 -0.4180207252502441 1 2 Y{[{M(Oxidation (M))|F}H]|[RQ]}Y 4 -1 13.188 0.0 0.0 0.71636 0.0 0.0 0.0 1227.6131262255956 1227.6131262255956 0.7133375178436552 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{[{M(Oxidation (M))|F}H]|[RQ]}Y 0.71636 - 17 + 1 2.351 53005.0 1.0 30 1910 1941 DOHH2_400M_050219_2,1942 DOHH2_400M_050219_2,1942, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 1944 7.9416 800.0 90096.0 25 0 15460.0 -1 0 65 576.2994164518582 1725.8764199557745 3 576.2998535037041 MULTI CID FTMS 0 0 0 1943 73823.8984375 0.1611989569676839 79 -0.4145374298095703 1 2 {I|L} 1 -1 12.218 0.0 0.0 0.70796 0.0 0.0 1594.7814777944443 0.0 1594.7814777944443 0.0 6.73393743112328 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.70796 - 26 + 1 2.351 62543.7 0.3799999952316284 31 1911 1943 DOHH2_400M_050219_2,1944 DOHH2_400M_050219_2,1944, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 1952 7.9735 297.0 164340.0 25 0 15746.0 + 35650 SVDARMREEK 10 65 407.5387821992339 1219.5945171979015 3 407.5383483767509 MULTI CID FTMS 0 0 0 1951 107367.3203125 0.5665987034911804 -32 0.1476783752441406 1 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 9.38312468134398 0.6832340498775793 2 DVH[{M(Oxidation (M))|F}T][KG] 7 -1 19.481 0.0 0.0 1.5973 0.0 0.0 417.221971580275 0.0 417.221971580275 0.0 3.098739692220196 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 DVH[{M(Oxidation (M))|F}T][KG] 1.5973 - 34 1 2.351 47695.6 1.0 32 1918 1951 DOHH2_400M_050219_2,1952 DOHH2_400M_050219_2,1952,SVDARMREEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 1966 8.0381 800.0 99272.0 25 0 26314.0 + 8460 ESSPNHLYVKE 11 81 434.8821210737669 0 434.8822814822197 PEAK CID FTMS 0 0 0 1965 104970.4453125 0.7964907195154266 -30 0.1435112953186035 1 Unmodified _ESSPNHLYVKE_ REV__ENSG00000075568|ENST00000186436|TMEM131 5.731851221503515 0.47618401536486 2 D 1 -1 0.088644 0.0 0.0 0.010215 0.0 0.0 582.6532669504651 167.04572473697502 749.6989916874401 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.010215 - 1 + 1 2.351 69394.6 0.8899999856948853 33 1931 1965 DOHH2_400M_050219_2,1966 DOHH2_400M_050219_2,1966,ESSPNHLYVKE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 1976 8.0794 370.0 150380.0 25 0 98967.0 -1 WYRYKTYYCL 10 36 505.9069250516775 0 505.9069702029228 PEAK CID FTMS 0 0 0 1975 211409.78125 0.1409722777905585 -589 2.603630542755127 1 Carbamidomethyl (C) _WYRYKTYYC(Carbamidomethyl (C))L_ nc|ENSG00000125107|A5YKK6-4|CNOT1 0.1398918051519055 0.3961065659209837 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.351 51545.2 1.0 34 1940 1975 DOHH2_400M_050219_2,1976 DOHH2_400M_050219_2,1976,WYRYKTYYCL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 1998 8.1738 663.0 87444.0 25 0 14797.0 + 11965 GPEAGRKPA 9 80 441.7432094212893 881.4718659093785 2 441.7432128787041 MULTI CID FTMS 0 0 0 1997 78662.15625 0.014298765524669 132 -0.7213954925537109 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 37.97399986684836 0.0865783450051559 2 [PG]EAS 5 5 47.703 0.0 0.0 5.4117 0.0 0.0 0.0 437.2651461236938 437.2651461236938 24.771212547196622 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.5 0.0 [PG]EAS 5.4117 - 96 + 1 2.351 48289.8 1.0 35 1961 1997 DOHH2_400M_050219_2,1998 DOHH2_400M_050219_2,1998,GPEAGRKPA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2001 8.1937 764.0 124120.0 25 0 10309.0 + 26490 NTTGSKSNL 9 57 461.2362146009203 0 461.2361633181572 PEAK CID FTMS 0 0 0 2000 62619.0 0.6189923759954368 -11 0.054351806640625 1 Unmodified _NTTGSKSNL_ REV__ENST00000346333.10_2_11:71510770-71510938:+|nuORF 9.38312468134398 0.3193474221348066 2 S 1 -1 4.732 0.0 0.0 0.51409 0.0 0.0 460.2595720342515 370.14109216861567 830.4006642028671 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 S 0.51409 + + 2 + 1 2.351 79766.7 1.0 36 1963 2000 DOHH2_400M_050219_2,2001 DOHH2_400M_050219_2,2001,NTTGSKSNL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2009 8.2342 800.0 193970.0 25 0 16845.0 + 37284 TIQESEVSAEK 11 140 407.5387821992339 1219.5945171979015 3 407.5386535525322 MULTI CID FTMS 0 0 0 2008 150076.09375 0.7919813952353161 20 -0.1205472946166992 1 Unmodified _TIQESEVSAEK_ REV__ENSG00000144395|ENST00000389175|CCDC150 14.40537977576856 0.7354982482299568 2 SVQHHVDA[QT]V 11 -1 + 60.142 0.0 0.0 4.9313 4.9313 72.741 0.0 0.0 0.0 35.73246094810262 1.0697847092524526 1.0697847092524526 0.6874087774748432 0 1.548455006504028 2.0 0.0 0.0 SVQHHVDA[QT]V;SVQHHVDAAASV;SVQHHVDA{[QS]|[NT]}{I|L};SVQHHVDA[KA]E;SVQHHVD{[NV]|[RG]}SV;SVQHVHDA[QT]V;SVQHVHDAAASV;SVQHVHDA{[QS]|[NT]}{I|L};SVQHVHDA[KA]E;SVQHHVWKCP 4.9313;4.875;4.8004;4.6711;4.5577;4.01;3.9536;3.879;3.7498;3.7171 -;-;-;-;-;-;-;-;-;- 922 + 1 2.351 127122.8 0.4399999976158142 37 1970 2008 DOHH2_400M_050219_2,2009 DOHH2_400M_050219_2,2009,TIQESEVSAEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2013 8.2585 800.0 37914.0 25 0 16258.0 -1 QHCISCVWHC 10 45 636.7586677443624 0 636.7585327029228 PEAK CID FTMS 0 0 0 2012 99374.5078125 0.750913675197529 33 -0.1728134155273437 1 Carbamidomethyl (C) _QHCISCVWHC(Carbamidomethyl (C))_ ENST00000470761.5_1_7:10973306-10978495:-|nuORF;ENST00000486007.1_1_7:10977712-10978495:-|nuORF 1.6526216038709556 0.3961065659209837 2 C(Carbamidomethyl (C)) 1 -1 4.6041 0.0 0.0 0.3621 0.0 0.0 889.5601078502497 218.888482915686 1108.4485907659357 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.3621 + + 4 + 1 2.351 29312.9 0.4000000059604645 38 1973 2012 DOHH2_400M_050219_2,2013 DOHH2_400M_050219_2,2013,QHCISCVWHC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2016 8.2697 246.0 324270.0 25 0 84917.0 8796 EWDKTHLYAK 10 64 430.8881131772836 0 430.8880798220634 PEAK CID FTMS 0 0 0 2015 285377.375 0.5961780162818178 -811 3.5620551109313965 1 Unmodified _EWDKTHLYAK_ ENST00000540725.5_1_11:62622615-62622948:-|nuORF 6.723162845929126 0.3961065659209837 2 T 1 9 6.5495 0.0 0.0 0.76178 0.0 0.0 430.528410337186 325.1637056940063 755.6921160311923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + T 0.76178 + + 6 + 1 2.351 67251.8 1.0 39 1975 2015 DOHH2_400M_050219_2,2016 DOHH2_400M_050219_2,2016,EWDKTHLYAK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2022 8.3022 800.0 109870.0 25 0 26100.0 8875 FADTYLKDSSR 11 76 434.8821210737669 0 434.8818847537041 PEAK CID FTMS 0 0 0 2021 101452.125 0.7697945435694609 19 -0.0887384414672851 1 Unmodified _FADTYLKDSSR_ ENSG00000073350|ENST00000392550|LLGL2;ENST00000545227.6_1_17:73554011-73570984:+|nuORF;nc|ENSG00000073350|Q6P1M3-2|LLGL2 1.3295316138638542 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.351 73927.4 0.4300000071525574 40 1980 2021 DOHH2_400M_050219_2,2022 DOHH2_400M_050219_2,2022,FADTYLKDSSR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2048 8.415 800.0 73141.0 25 0 38884.0 -1 0 65 496.04949744870015 495.04222098210016 1 496.0497924685478 MULTI CID FTMS 0 0 0 2047 90218.9453125 0.5584707664303117 -72 0.3564205169677734 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.351 47756.2 0.4300000071525574 41 2005 2047 DOHH2_400M_050219_2,2048 DOHH2_400M_050219_2,2048, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2054 8.4405 383.0 274000.0 25 0 178150.0 + 8291 EQNEIISSHDG 11 26 614.776917017761 0 614.7769042849541 PEAK CID FTMS 0 0 0 2053 284164.96875 0.4230038857666839 -245 1.274871826171875 1 Unmodified _EQNEIISSHDG_ REV__ENSG00000159917|ENST00000291182|ZNF235;REV__nc|ENSG00000159917|Q14590-2|ZNF235 1.1933415558491238 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.351 82368.6 1.0 42 2010 2053 DOHH2_400M_050219_2,2054 DOHH2_400M_050219_2,2054,EQNEIISSHDG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2057 8.4582 641.0 120130.0 25 0 21447.0 -1 0 94 541.268382697123 540.261106230523 1 541.2686645388603 MULTI CID FTMS 0 0 0 2056 118715.5703125 0.4565856979563246 31 -0.2186174392700195 1 2 N 1 -1 13.099 0.0 0.0 2.4246 0.0 0.0 408.2073322820839 0.0 408.2073322820839 0.0 5.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 2.4246 - 20 + 1 2.351 61042.2 1.0 43 2012 2056 DOHH2_400M_050219_2,2057 DOHH2_400M_050219_2,2057, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2058 8.472 800.0 126750.0 25 0 21784.0 + 11966 GPEAGRKPA 9 112 441.7428259629432 881.4710989926864 2 441.7427551150322 MULTI CID FTMS 0 0 0 2056 107039.765625 0.5893493515780229 -15 0.0780372619628906 2 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 53.832793166522166 0.0319663582346103 2 GPEAS 5 5 71.186 0.0 0.0 8.0758 0.0 0.0 0.0 437.2690828912719 437.2690828912719 50.384096214218914 0.0 0.0 0.0 0 1.924742501084005 1.6989700043360187 0.5 0.0 GPEAS 8.0758 - 246 + 1 2.351 84753.2 0.959999978542328 44 2012 2056 DOHH2_400M_050219_2,2058 DOHH2_400M_050219_2,2058,GPEAGRKPA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2065 8.5039 521.0 154710.0 25 0 90978.0 -1 WYRYKTYYCL 10 51 505.9069250516775 0 505.9068481326103 PEAK CID FTMS 0 0 0 2064 188535.40625 0.1257191862461699 -511 2.374758720397949 1 Carbamidomethyl (C) _WYRYKTYYC(Carbamidomethyl (C))L_ nc|ENSG00000125107|A5YKK6-4|CNOT1 0.1593219195374162 0.3961065659209837 2 S 1 -1 1.9897 0.0 0.0 0.19704 0.0 0.0 774.7316377236691 145.01506982974846 919.7467075534177 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.19704 - 1 + 1 2.351 68960.8 1.0 45 2018 2064 DOHH2_400M_050219_2,2065 DOHH2_400M_050219_2,2065,WYRYKTYYCL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 2068 8.5243 800.0 151380.0 25 0 20512.0 -1 FVKIALACFKR 11 121 451.60228185414337 0 451.6019164919853 PEAK CID FTMS 0 0 0 2067 81154.578125 0.9290080327581348 -4 0.0238914489746093 1 Carbamidomethyl (C) _FVKIALAC(Carbamidomethyl (C))FKR_ ENST00000439423.1_1_22:46453860-46453926:-|nuORF 0.5059551277355931 0.4761840153648598 2 V 1 -1 0.71334 0.0 0.0 0.079155 0.0 0.0 449.9652620952024 349.1433199518188 799.1085820470212 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.079155 + + 1 + 1 2.351 96838.4 0.4099999964237213 46 2020 2067 DOHH2_400M_050219_2,2068 DOHH2_400M_050219_2,2068,FVKIALACFKR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2072 8.5475 718.0 151280.0 25 0 21509.0 + 7692 EKRSVCQNEK 10 113 407.5391279084236 1219.5955543254709 3 407.8730956912041 MULTI CID FTMS 0 0 0 2071 42789.4609375 0.521837758845363 1 -0.0197353363037109 1 Unmodified _EKRSVCQNEK_ REV__ENSG00000197057|ENST00000639862|DTHD1 16.149105407346934 0.5765757077271437 2 [WK]HHVDA{[CP]|[EA]}K 10 -1 + 31.704 0.0 0.0 2.5996 2.5996 69.606 0.0 0.0 0.0 5.221157291141836 2.007046801327732 2.007046801327732 3.697844045718618 0 0.4247425010840047 0.0 0.0 0.3054621874040891 [WK]HHVDA{[CP]|[EA]}K;[VS]AN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H[{M(Oxidation (M))|F}T]GK;[WK]HH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NAAP;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H[{M(Oxidation (M))|F}T]GK;[WK]HH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGAAP;[WK]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{M(Oxidation (M))|F}{[CP]|[EA]}K;[WK]HH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QQP 2.5996;2.2964;1.1563;0.63937;0.4049;0.34464;0.11256 -;-;-;-;-;-;- 453 + 1 2.351 89647.3 1.0 47 2023 2071 DOHH2_400M_050219_2,2072 DOHH2_400M_050219_2,2072,EKRSVCQNEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2073 8.5522 255.0 304150.0 25 0 91762.0 -1 0 93 402.19540346150666 401.18812699490667 1 404.2104675173759 MULTI CID FTMS 0 0 0 2071 108250.546875 0.7543564189766719 -11 0.0879497528076171 2 2 K 1 -1 11.984 0.0 0.0 2.9872 0.0 0.0 255.08257997517853 0.0 255.08257997517853 0.0 1.8955330260879943 0.0 0.0 0 0.0 0.0 0.0 0.1803115997617927 K 2.9872 - 16 + 1 2.351 67072.0 1.0 48 2023 2071 DOHH2_400M_050219_2,2073 DOHH2_400M_050219_2,2073, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2076 8.567 463.0 229050.0 25 0 44421.0 45496 YTPPSLKA 8 81 438.7431923079995 875.471831682799 2 438.7435485720634 MULTI CID FTMS 0 0 0 2075 190768.296875 0.8821891829614796 -5 0.0482950210571289 1 Unmodified _YTPPSLKA_ ENSG00000131771|ENST00000254079|PPP1R1B;nc|ENSG00000131771|Q9UD71-2|PPP1R1B 4.75600775471527 0.7954636275367004 2 RRER{M(Oxidation (M))|F}{I|L} 6 7 + 16.342 0.0 0.0 1.8666 1.8666 78.31 0.0 0.0 0.0 5.745792252903272 10.628386773655658 5.745792252903272 16.341724291499315 0 1.0924778212679485 0.0 0.0 0.0 RRER{M(Oxidation (M))|F}{I|L} 1.8666 - 15 + 1 2.351 91269.2 1.0 49 2025 2075 DOHH2_400M_050219_2,2076 DOHH2_400M_050219_2,2076,YTPPSLKA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2081 8.5845 151.0 485520.0 25 0 64531.0 + 13812 HTKIRHVDA 9 110 359.53640742895186 1075.5873928870556 3 359.5365478396416 MULTI CID FTMS 0 0 0 2080 374749.0625 0.6188469931041116 -12 0.0908727645874023 1 Unmodified _HTKIRHVDA_ ENSG00000138757|ENST00000359707|G3BP2;ENSG00000145907|ENST00000356245|G3BP1;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000138757|Q9UN86-2|G3BP2;nc|ENSG00000145907|Q13283-2|G3BP1 33.4449034751529 0.1114409586740657 2 HDVA 4 6 36.983 0.0 0.0 3.4384 0.0 0.0 635.3884144513687 0.0 635.3884144513687 0.0 21.990373906736767 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 HDVA 3.4384 - 51 1 2.351 65235.4 1.0 50 2029 2080 DOHH2_400M_050219_2,2081 DOHH2_400M_050219_2,2081,HTKIRHVDA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2082 8.5984 800.0 112860.0 25 0 25826.0 26959 PECERRPSICL 11 81 434.8821210737669 0 434.8819457888603 PEAK CID FTMS 0 0 0 2080 91367.3671875 0.6932738049719994 68 -0.3182210922241211 2 Unmodified _PECERRPSICL_ ENST00000522621.1_2_8:62044343-62212351:+|nuORF 3.2813086475875832 0.4761840153648598 2 R 1 10 5.7969 0.0 0.0 0.66804 0.0 0.0 433.5252762278088 275.10358606510005 708.6288622929088 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2302046884880938 + R 0.66804 + + 6 + 1 2.351 75838.5 0.4199999868869781 51 2029 2080 DOHH2_400M_050219_2,2082 DOHH2_400M_050219_2,2082,PECERRPSICL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2086 8.623 800.0 91418.0 25 0 11902.0 + 13813 HTKIRHVDA 9 90 538.8014997503199 1075.5884465674396 2 538.8019286990166 MULTI CID FTMS 0 0 0 2085 77906.671875 0.6780526585408674 -3 0.0275726318359375 1 Unmodified _HTKIRHVDA_ ENSG00000138757|ENST00000359707|G3BP2;ENSG00000145907|ENST00000356245|G3BP1;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000138757|Q9UN86-2|G3BP2;nc|ENSG00000145907|Q13283-2|G3BP1 29.43715596616401 0.1566398223704148 2 HTK{I|L} 4 5 51.372 0.0 0.0 4.7762 0.0 0.0 0.0 593.2809542291624 593.2809542291624 24.68939172763337 0.0 0.0 0.0 0 0.7215141619232908 1.2218487496163564 0.0 0.0 + HTK{I|L} 4.7762 + + 32 + 1 2.351 59668.5 0.4199999868869781 52 2032 2085 DOHH2_400M_050219_2,2086 DOHH2_400M_050219_2,2086,HTKIRHVDA False True HTKIRHVDA 8.622973 538.801928699017 3748431.5 2085.0 ENSG00000145907|ENST00000356245|G3BP1;;nc|ENSG00000145907|Q13283-2|G3BP1;;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;;ENSG00000138757|ENST00000359707|G3BP2;;nc|ENSG00000138757|Q9UN86-2|G3BP2 2.844054619471232 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2100 8.6797 323.0 220610.0 25 0 52174.0 -1 WCRLRPRML 9 62 435.2351460411441 0 435.2357665896416 PEAK CID FTMS 0 0 0 2099 96616.234375 0.3466862833551826 -264 1.450681209564209 1 Carbamidomethyl (C),Oxidation (M) _WC(Carbamidomethyl (C))RLRPRM(Oxidation (M))L_ ENST00000586523.1_1_18:43667332-43667440:-|nuORF 5.296884461304476 0.3444685223463735 2 R 1 -1 7.034 0.0 0.0 0.80995 0.0 0.0 434.228482921218 275.1036776178344 709.3321605390524 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 R 0.80995 + + 7 + 1 2.351 60637.2 1.0 53 2045 2099 DOHH2_400M_050219_2,2100 DOHH2_400M_050219_2,2100,WCRLRPRML False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2128 8.8007 800.0 36081.0 25 0 16510.0 + -1 QPCKCPWHC 9 39 636.7587237177803 0 636.7588378787041 PEAK CID FTMS 0 0 0 2127 102670.5234375 0.3579995510645056 -186 0.96638822555542 1 3 Carbamidomethyl (C) _QPC(Carbamidomethyl (C))KC(Carbamidomethyl (C))PWHC(Carbamidomethyl (C))_ REV__ENSG00000112761|ENST00000368666|CCN6;REV__nc|ENSG00000112761|O95389-2|CCN6 0.5247636613948944 0.3444685223463735 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.351 33190.5 0.4199999868869781 54 2072 2127 DOHH2_400M_050219_2,2128 DOHH2_400M_050219_2,2128,QPCKCPWHC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2162 8.9459 800.0 13529.0 25 0 2096.7 6698 ECKRRFYKNC 10 27 673.8252484312121 0 673.8254882693291 PEAK CID FTMS 0 0 0 2161 89864.1328125 0.6638066551663723 49 -0.2365570068359375 1 Unmodified _ECKRRFYKNC_ ENST00000465618.5_1_22:39712851-39715803:-|nuORF 1.4819007175156935 0.3961065659209837 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.351 14816.4 0.4099999964237213 55 2105 2161 DOHH2_400M_050219_2,2162 DOHH2_400M_050219_2,2162,ECKRRFYKNC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2174 8.9997 629.0 166430.0 25 0 53373.0 + 26943 PDYHEPWMS 9 111 387.828738384218 1160.464385752854 3 387.8295165896416 MULTI CID FTMS 0 0 0 2173 42391.16796875 0.508147820236723 1 -0.0135211944580078 1 Unmodified _PDYHEPWMS_ REV__ENSG00000152818|ENST00000367545|UTRN;REV__nc|ENSG00000152818|P46939-2|UTRN;REV__nc|ENSG00000152818|P46939-3|UTRN;REV__nc|ENSG00000152818|P46939-4|UTRN 5.296884461304476 0.7297726132274777 2 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 1.2585 0.0 0.0 995.4182411989462 0.0 995.4182411989462 0.0 4.225490200071285 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2585 + + 92 + 1 2.351 88411.1 1.0 56 2116 2173 DOHH2_400M_050219_2,2174 DOHH2_400M_050219_2,2174,PDYHEPWMS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2193 9.0788 459.0 235480.0 25 0 36733.0 + 45424 YTDHGSDHHY 10 110 411.1634565143825 1230.4685401433476 3 411.1633483767509 MULTI CID FTMS 0 0 0 2192 170910.28125 0.4660203829048089 -23 0.1021432876586914 1 Unmodified _YTDHGSDHHY_ ENSG00000076053|ENST00000375490|RBM7;ENST00000265882.5_1_2:80389676-80390174:-|nuORF;ENST00000541475.5_1_11:114278100-114278526:+|nuORF;nc|ENSG00000076053|Q9Y580|RBM7 32.037481411007896 0.2488723560272515 2 [YT]SC(Carbamidomethyl (C))THHY 8 5 48.445 0.0 0.0 3.9372 0.0 0.0 0.0 178.04979658703124 178.04979658703124 31.79983331445132 0.0 0.0 0.0 0 1.0501648626366045 1.6989700043360187 1.1549471895720984 0.0 [YT]SC(Carbamidomethyl (C))THHY 3.9372 - 667 1 2.351 88484.9 1.0 57 2134 2192 DOHH2_400M_050219_2,2193 DOHH2_400M_050219_2,2193,YTDHGSDHHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2201 9.1107 276.0 270180.0 25 0 41630.0 + -1 SLLNELMKPV 10 96 387.2191704464734 1158.6356819396203 3 387.2196838259697 MULTI CID FTMS 0 0 0 2200 171922.875 0.5428381304887854 -25 0.1169347763061523 1 Oxidation (M) _SLLNELM(Oxidation (M))KPV_ REV__nc|ENSG00000284723|Q8NH09|OR8S1 42.312485326615175 0.1331477410672653 2 [{I|L}T]V{M(Oxidation (M))|F}KN 6 -1 52.224 0.0 0.0 4.5073 0.0 0.0 0.0 453.2323397272094 453.2323397272094 40.44083532467928 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.4247425010840047 [{I|L}T]V{M(Oxidation (M))|F}KN 4.5073 - 197 + 1 2.351 62182.9 1.0 58 2141 2200 DOHH2_400M_050219_2,2201 DOHH2_400M_050219_2,2201,SLLNELMKPV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2209 9.1461 496.0 81096.0 25 0 48839.0 + -1 QYHFNCMKE 9 39 636.7587237177803 0 636.7587768435478 PEAK CID FTMS 0 0 0 2208 248976.421875 0.8681503149358769 -110 0.4918279647827148 1 Carbamidomethyl (C),Oxidation (M) _QYHFNC(Carbamidomethyl (C))M(Oxidation (M))KE_ REV__ENSG00000144036|ENST00000272427|EXOC6B;REV__nc|ENSG00000144036|Q9Y2D4-2|EXOC6B 0.4583401331227399 0.3444685223463734 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.351 35250.1 1.0 59 2148 2208 DOHH2_400M_050219_2,2209 DOHH2_400M_050219_2,2209,QYHFNCMKE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2222 9.1991 345.0 318120.0 25 0 20546.0 + 7818 ELKEKKKEL 9 114 382.2356189148689 1143.6850273448067 3 382.2356445193291 MULTI CID FTMS 0 0 0 2221 230835.828125 0.769333353469097 -15 0.0675430297851562 1 Unmodified _ELKEKKKEL_ ENSG00000072501|ENST00000322213|SMC1A 35.61225514009592 0.0995432151795903 2 W{M(Oxidation (M))|F}{I|L} 3 8 26.242 0.0 0.0 2.2945 0.0 0.0 679.4382191388687 0.0 679.4382191388687 0.0 14.822226218459011 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 W{M(Oxidation (M))|F}{I|L} 2.2945 - 109 1 2.351 91219.4 1.0 60 2160 2221 DOHH2_400M_050219_2,2222 DOHH2_400M_050219_2,2222,ELKEKKKEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2228 9.2305 739.0 110650.0 25 0 5299.2 + + -1 VQHVDAAEK 9 112 499.1973551313518 1494.5702359942554 3 499.1972534060478 MULTI CID FTMS 0 0 0 2227 78849.6640625 0.3316995976192775 -57 0.2611255645751953 1 Carbamidomethyl (C) _DHRDEC(Carbamidomethyl (C))DEEYK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 0.4545168274142398 0.8730034954726786 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SQHSEDA[PA]G 12 -1 41.169 0.0 0.0 2.7546 0.0 0.0 0.0 255.0116090437802 255.0116090437802 21.35963108876089 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.7742275032520141 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SQHSEDA[PA]G 2.7546 - 1293 1 2.351 70370.0 1.0 61 2165 2227 DOHH2_400M_050219_2,2228 DOHH2_400M_050219_2,2228,DHRDECDEEYK False False VQHVDAAEK 9.2304796 499.197253406048 472766.21875 2227.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 6.346047242482503 2.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 2243 9.2991 800.0 59465.0 25 0 5315.8 + 7819 ELKEKKKEL 9 74 572.8503971880197 1143.6862414428392 2 572.8506957888603 MULTI CID FTMS 0 0 0 2242 33555.1640625 0.392504468273204 1 -0.0163831710815429 1 Unmodified _ELKEKKKEL_ ENSG00000072501|ENST00000322213|SMC1A 37.250883937326 0.0905479120972837 2 E{I|L}KEKK 6 3 64.435 0.0 0.0 5.634 0.0 0.0 0.0 385.2097567193969 385.2097567193969 40.83018177991335 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.4247425010840047 0.3807196863200844 + E{I|L}KEKK 5.634 + + 89 + 1 2.351 41708.7 0.3799999952316284 62 2179 2242 DOHH2_400M_050219_2,2243 DOHH2_400M_050219_2,2243,ELKEKKKEL True True ELKEKKKEL 9.2991044 572.85069578886 2402780.125 2242.0 ENSG00000072501|ENST00000322213|SMC1A 4.170325477917989 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2250 9.3297 444.0 206030.0 25 0 35993.0 + 45425 YTDHGSDHHY 10 87 411.1634565143825 1230.4685401433476 3 411.1632873415947 MULTI CID FTMS 0 0 0 2249 146621.84375 0.3997931971490689 28 -0.1698551177978515 1 Unmodified _YTDHGSDHHY_ ENSG00000076053|ENST00000375490|RBM7;ENST00000265882.5_1_2:80389676-80390174:-|nuORF;ENST00000541475.5_1_11:114278100-114278526:+|nuORF;nc|ENSG00000076053|Q9Y580|RBM7 38.61474834105838 0.1721950110283317 2 [YT]{M(Oxidation (M))|F}[MD]GH 7 6 32.184 0.0 0.0 2.6156 0.0 0.0 0.0 376.1157753135168 376.1157753135168 5.255310316373354 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.6747425010840047 0.0 [YT]{M(Oxidation (M))|F}[MD]GH 2.6156 - 332 1 2.351 77516.6 1.0 63 2185 2249 DOHH2_400M_050219_2,2250 DOHH2_400M_050219_2,2250,YTDHGSDHHY False True YTDHGSDHHY 9.3296663 411.163287341595 4309089.5 2249.0 ENSG00000076053|ENST00000375490|RBM7;;ENST00000541475.5_1_11:114278100-114278526:+|nuORF;;ENST00000265882.5_1_2:80389676-80390174:-|nuORF;;nc|ENSG00000076053|Q9Y580|RBM7 6.909600257873535 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2259 9.3649 235.0 233300.0 25 0 39181.0 + 37200 TIHHPIELTV 10 93 387.2191704464734 1158.6356819396203 3 387.2195007205009 MULTI CID FTMS 0 0 0 2258 135568.4375 0.4280507591894664 27 -0.185516357421875 1 Unmodified _TIHHPIELTV_ REV__ENSG00000172650|ENST00000374094|AGAP5;REV__ENSG00000188234|ENST00000616763|AGAP4;REV__ENSG00000204149|ENST00000412531|AGAP6;REV__ENSG00000204172|ENST00000452145|AGAP9;REV__ENST00000454844.1_1_10:46187592-46195676:+|nuORF;REV__nc|ENSG00000188234|Q96P64|AGAP4;REV__nc|ENSG00000204149|Q5VW22|AGAP6;REV__nc|ENSG00000264204|Q5VUJ5|AGAP7P 17.44264345198275 0.5548713957087773 2 [{I|L}T]V{M(Oxidation (M))|F}RRTG 8 -1 47.51 0.0 0.0 4.1005 0.0 0.0 0.0 225.08806787662343 225.08806787662343 35.9163750790475 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.4247425010840047 [{I|L}T]V{M(Oxidation (M))|F}RRTG 4.1005 - 167 + 1 2.351 49028.8 1.0 64 2193 2258 DOHH2_400M_050219_2,2259 DOHH2_400M_050219_2,2259,TIHHPIELTV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2269 9.4136 800.0 45803.0 25 0 4683.9 -1 0 57 677.3194280366171 2705.248606280068 4 677.3189575076103 MULTI CID FTMS 0 0 0 2268 25026.25390625 0.3317396330604151 1 -0.0163774490356445 1 2 T 1 -1 11.99 0.0 0.0 0.4432 0.0 0.0 356.16916269423047 2245.001955298093 2601.171117992324 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 T 0.4432 - 23 + 1 2.351 36079.8 0.3400000035762787 65 2202 2268 DOHH2_400M_050219_2,2269 DOHH2_400M_050219_2,2269, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2275 9.446 800.0 58144.0 25 0 19573.0 -1 GRWDHQFYMRF 11 46 779.8560930675965 0 779.8553344607353 PEAK CID FTMS 0 0 0 2274 95151.1484375 1.0 0 0.0 1 Oxidation (M) _GRWDHQFYM(Oxidation (M))RF_ ENSG00000143127|ENST00000369304|ITGA10;nc|ENSG00000143127|O75578-3|ITGA10 1.1933415558491238 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.351 40820.0 0.3600000143051147 66 2207 2274 DOHH2_400M_050219_2,2275 DOHH2_400M_050219_2,2275,GRWDHQFYMRF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2278 9.4592 363.0 204030.0 25 0 17602.0 + 11086 GEEENQKRY 9 107 384.8476598316236 1151.5211500950709 3 384.8470947146416 MULTI CID FTMS 0 0 0 2277 128002.3046875 0.5352359850340469 -24 0.1308574676513672 1 Unmodified _GEEENQKRY_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2 37.97399986684836 0.0865783450051559 2 KQN[HC]EG 7 8 39.737 0.0 0.0 3.4508 0.0 0.0 337.1750781756947 0.0 337.1750781756947 0.0 3.9912101027395854 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 KQN[HC]EG 3.4508 - 158 1 2.351 63112.4 1.0 67 2209 2277 DOHH2_400M_050219_2,2278 DOHH2_400M_050219_2,2278,GEEENQKRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2279 9.4679 492.0 160120.0 25 0 9034.2 28278 PRKKRPSYL 9 118 382.2356189148689 1143.6850273448067 3 382.2353698611259 MULTI CID FTMS 0 0 0 2277 89896.7109375 0.2996092012802179 34 -0.1861047744750976 2 Unmodified _PRKKRPSYL_ nc|ENSG00000177707|Q9NQS3-3|NECTIN3 7.608950283845883 0.6490595679007971 2 K{M(Oxidation (M))|F}{I|L} 3 7 28.698 0.0 0.0 2.5092 0.0 0.0 737.4503651349625 0.0 737.4503651349625 0.0 12.513487579716765 0.0 0.0 0 0.25 0.0 0.0 0.0 K{M(Oxidation (M))|F}{I|L} 2.5092 - 72 1 2.351 65821.1 1.0 68 2209 2277 DOHH2_400M_050219_2,2279 DOHH2_400M_050219_2,2279,PRKKRPSYL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 2282 9.485 606.0 157450.0 25 0 10070.0 + -1 DHRDECDEEYK 11 119 499.1973551313518 1494.5702359942554 3 499.1973144412041 MULTI CID FTMS 0 0 0 2281 191634.1875 0.8061541369848139 -11 0.0828619003295898 1 Carbamidomethyl (C) _DHRDEC(Carbamidomethyl (C))DEEYK_ REV__ENSG00000087510|ENST00000201031|TFAP2C 1.3296431237094175 0.8688745925763601 2 {[ES]|[DT]|[{I|L}C]}KGAHSEDAV 11 -1 55.341 0.0 0.0 3.7028 0.0 0.0 0.0 381.05230480518384 381.05230480518384 36.94408955051868 0.0 0.0 0.0 0 0.0 0.0 0.9604093769761876 0.4247425010840047 {[ES]|[DT]|[{I|L}C]}KGAHSEDAV 3.7028 - 1462 1 2.351 78401.5 1.0 69 2211 2281 DOHH2_400M_050219_2,2282 DOHH2_400M_050219_2,2282,DHRDECDEEYK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2285 9.5055 800.0 78795.0 25 0 6701.2 + -1 DMEMYMKWKCD 11 72 748.292627106819 1494.570701280438 2 748.2928344607353 MULTI CID FTMS 0 0 0 2284 83325.046875 1.0 0 0.0 1 Oxidation (M) _DMEMYM(Oxidation (M))KWKCD_ REV__ENSG00000091436|ENST00000375213|MAP3K20 2.735195868890462 0.8622431031272658 2 T[PA]ADESHQ 9 -1 46.916 0.0 0.0 3.1391 0.0 0.0 214.0078942179057 341.1458529108032 555.1537471287089 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.805462187404089 T[PA]ADESHQ 3.1391 - 370 + 1 2.351 52972.3 0.3700000047683716 70 2213 2284 DOHH2_400M_050219_2,2285 DOHH2_400M_050219_2,2285,DMEMYMKWKCD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2286 9.5193 800.0 126380.0 25 0 11642.0 + 11088 GEEENQKRY 9 108 576.7673175988178 1151.5200822644356 2 576.7677490115166 MULTI CID FTMS 0 0 0 2284 120349.15625 0.7350245709718226 -6 0.0594511032104492 2 Unmodified _GEEENQKRY_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2 82.5293158979368 0.0169039238599547 2 GEEENQKRY 9 0 + 109.93 0.0 0.0 9.5468 9.5468 93.72 0.0 0.0 0.0 85.94843468456581 11.478174818886371 11.478174818886371 9.208187539523747 0 1.1989700043360187 1.6989700043360187 1.305462187404089 1.055462187404089 + + GEEENQKRY;GEEEGGQKRY;GEEEN[AG]KRY;GEEENQY[RK];GEEEGG[AG]KRY;GEEEGGQY[RK];GEEEN[AG]Y[RK];GEEEGG[AG]Y[RK];WE{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[RK];W{M(Oxidation (M))|F}QD{[WS]|[C(Carbamidomethyl (C)){I|L}]}[RK] 9.5468;8.7471;8.7471;8.2219;7.9512;7.4223;7.4223;6.6264;2.1685;2.0096 +;-;-;-;-;-;-;-;-;- + 362 + 1 2.351 80306.5 0.4699999988079071 71 2213 2284 DOHH2_400M_050219_2,2286 DOHH2_400M_050219_2,2286,GEEENQKRY True True GEEENQKRY 9.5193175 576.767749011517 3916855.0 2284.0 ENST00000521903.5_1_8:124361561-124413087:-|nuORF;;nc|ENSG00000156802|Q6PL18-2|ATAD2;;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;;ENSG00000156802|ENST00000287394|ATAD2;;ENST00000517666.5_1_8:124333376-124408650:-|nuORF 7.594342549641927 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2320 9.6648 800.0 60770.0 25 0 3142.5 + 7259 EESQPAKKTY 10 100 590.7953933322764 1179.5762337313529 2 590.7955200076103 MULTI CID FTMS 0 0 0 2319 45426.89453125 0.5503158240433238 1 -0.0163707733154296 1 Unmodified _EESQPAKKTY_ ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A 37.77132515983256 0.1811013699114492 2 KTY 3 7 21.898 0.0 0.0 1.8564 0.0 0.0 769.362954937205 0.0 769.362954937205 0.0 3.987030248381913 0.0 0.0 0 0.4247425010840047 0.0 0.25 0.0 + KTY 1.8564 + + 241 + 1 2.351 38851.9 0.4000000059604645 72 2246 2319 DOHH2_400M_050219_2,2320 DOHH2_400M_050219_2,2320,EESQPAKKTY False True EESQPAKKTY 9.6647521 590.79552000761 457399.0 2319.0 nc|ENSG00000196504|O75400-3|PRPF40A;;ENSG00000196504|ENST00000545856|PRPF40A;;nc|ENSG00000196504|O75400|PRPF40A;;nc|ENSG00000196504|O75400-2|PRPF40A 4.685637791951497 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2323 9.6865 800.0 63351.0 25 0 6626.2 -1 0 50 578.7907747235408 2311.133993027763 4 579.0417968630791 MULTI CID FTMS 0 0 0 2322 62513.44140625 0.6339336609062145 -13 0.0647449493408203 1 2 GP 2 -1 17.959 0.0 0.0 0.77706 0.0 0.0 0.0 2154.037370443681 2154.037370443681 13.354706403678875 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GP 0.77706 - 6 + 1 2.351 50814.8 0.3799999952316284 73 2248 2322 DOHH2_400M_050219_2,2323 DOHH2_400M_050219_2,2323, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2326 9.697 203.0 308030.0 25 0 36157.0 + -1 IQRLETMK 8 95 517.7865266814281 1033.558500429656 2 517.7866699099541 MULTI CID FTMS 0 0 0 2325 315147.5625 0.3895751076701708 -35 0.1671733856201172 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 32.30548876998284 0.3644845974844379 2 T{M(Oxidation (M))|F}K 3 -1 34.539 0.0 0.0 3.3418 0.0 0.0 639.3707085368811 0.0 639.3707085368811 0.0 -0.782957030980711 -0.782957030980711 0.0 0 0.8494850021680094 0.0 0.2742275032520141 0.25 T{M(Oxidation (M))|F}K 3.3418 + + 153 + 1 2.351 53009.7 1.0 74 2250 2325 DOHH2_400M_050219_2,2326 DOHH2_400M_050219_2,2326,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2329 9.7165 743.0 175240.0 25 0 25766.0 + 11087 GEEENQKRY 9 143 384.8476598316236 1151.5211500950709 3 384.8470641970634 MULTI CID FTMS 0 0 0 2328 121224.5625 0.5068951553521917 19 -0.1421432495117187 1 Unmodified _GEEENQKRY_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2 49.93300154707207 0.0405168250806675 2 WEENQK 6 4 56.547 0.0 0.0 4.9107 0.0 0.0 0.0 334.1529365838862 334.1529365838862 12.36875590891433 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.0 0.8494850021680094 WEENQK 4.9107 - 370 + 1 2.351 103108.7 1.0 75 2252 2328 DOHH2_400M_050219_2,2329 DOHH2_400M_050219_2,2329,GEEENQKRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2335 9.7384 172.0 362500.0 25 0 33804.0 + 6945 EEHLESHKKY 10 84 433.8825348461697 1298.6257751387093 3 433.8820068240166 MULTI CID FTMS 0 0 0 2334 256202.921875 0.5621671204828943 -8 0.0460453033447265 1 Unmodified _EEHLESHKKY_ nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2 16.274544907608252 0.5744709547479872 2 EEH{[QN]|[E{I|L}]|[KN]}[HS]KKY 10 0 + 29.442 0.0 0.0 2.2672 2.2672 77.12 0.0 0.0 0.0 10.947209416731807 4.749321833847873 4.749321833847873 10.314789170422554 0 0.5 1.0 0.3807196863200844 0.0 + + EEH{[QN]|[E{I|L}]|[KN]}[HS]KKY;EEH{[QN]|[E{I|L}]|[KN]}[HS]KYK;[DP]H{I|L}[KA]{[QN]|[E{I|L}]|[KN]}H[HC];[DP]HRR{[QN]|[E{I|L}]|[KN]}H[HC];[WY]{I|L}[KA]{[QN]|[E{I|L}]|[KN]}H[HC] 2.2672;1.4729;0.20035;0.1576;0.0094975 +;-;-;-;- + 146 + 1 2.351 56081.2 1.0 76 2257 2334 DOHH2_400M_050219_2,2335 DOHH2_400M_050219_2,2335,EEHLESHKKY False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 2336 9.7523 800.0 69644.0 25 0 3916.3 -1 LVPVIEMWA 9 68 537.2870752983152 0 537.2862426638603 PEAK CID FTMS 0 0 0 2334 51205.984375 0.6940837377869686 1 -0.0197000503540039 2 Oxidation (M) _LVPVIEM(Oxidation (M))WA_ ENSG00000114107|ENST00000264982|CEP70;nc|ENSG00000114107|Q8NHQ1-2|CEP70;nc|ENSG00000114107|Q8NHQ1-4|CEP70;nc|ENSG00000114107|Q8NHQ1-5|CEP70 5.230669730166228 0.3444685223463734 2 R 1 -1 5.4846 0.0 0.0 0.51135 0.0 0.0 314.1911417081554 599.2451265924436 913.4362683005992 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.51135 - 6 + 1 2.351 53601.3 0.3799999952316284 77 2257 2334 DOHH2_400M_050219_2,2336 DOHH2_400M_050219_2,2336,LVPVIEMWA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2341 9.7808 800.0 97991.0 25 0 6785.9 + 7597 EINKKGKSL 9 97 508.8083832955229 1015.6022136578456 2 508.8081237673759 MULTI CID FTMS 0 0 0 2340 127171.578125 1.0 0 0.0 1 Unmodified _EINKKGKSL_ ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33 51.41523569358685 0.0372669606867193 2 {I|L}ENKK[KG]S{I|L} 9 2 + 74.523 0.0 0.0 7.3378 7.3378 86.136 0.0 0.0 0.0 62.04908810783039 12.25268461881508 12.25268461881508 4.999999999999986 0 1.113982988912431 2.0 1.1022338482433751 0.0 {I|L}ENKK[KG]S{I|L};E{I|L}NKK[KG]S{I|L};{I|L}EGGKK[KG]S{I|L};E{I|L}GGKK[KG]S{I|L};[KG]G{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KKE{I|L};[KT]T[KP]{[QN]|[E{I|L}]|[KN]}S{I|L} 7.3378;6.8455;6.4312;5.9389;1.2005;0.51919 -;+;-;-;-;- + 261 + 1 2.351 65849.7 0.4399999976158142 78 2261 2340 DOHH2_400M_050219_2,2341 DOHH2_400M_050219_2,2341,EINKKGKSL True True EINKKGKSL 9.7807993 508.808123767376 431028.5 2340.0 ENSG00000197323|ENST00000358465|TRIM33;;nc|ENSG00000197323|Q9UPN9-2|TRIM33 5.596015055974324 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2347 9.8133 800.0 68066.0 25 0 5619.3 + 26338 NSEEHSAKY 9 94 532.7358940315552 1063.4572351299105 2 532.7362548708916 MULTI CID FTMS 0 0 0 2346 55274.69921875 0.4885727344933316 -10 0.06842041015625 1 Unmodified _NSEEHSAKY_ ENSG00000168297|ENST00000356151|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-3|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;nc|ENSG00000168297|Q7Z7A4-5|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK;nc|ENSG00000168297|Q7Z7A4-7|PXK 55.23464941255904 0.0288927259679799 2 NSEEHSAKY 9 0 + 78.249 0.0 0.0 7.358 7.358 93.511 0.0 0.0 0.0 8.239087409443187 12.878137714293857 8.239087409443187 12.878137714293857 0 1.539597571957891 1.3010299956639813 0.0 0.0 + + NSEEHSAKY;NSEEHSAYK;GG[HM][WD]AKY;GG[HM][WD]AYK 7.358;6.147;3.8317;2.6207 +;-;-;- + 187 + 1 2.351 48635.4 0.4099999964237213 79 2266 2346 DOHH2_400M_050219_2,2347 DOHH2_400M_050219_2,2347,NSEEHSAKY True True NSEEHSAKY 9.8132824 532.736254870892 685679.4375 2346.0 nc|ENSG00000168297|Q7Z7A4-5|PXK;;nc|ENSG00000168297|Q7Z7A4-4|PXK;;nc|ENSG00000168297|Q7Z7A4-2|PXK;;nc|ENSG00000168297|Q7Z7A4-6|PXK;;nc|ENSG00000168297|Q7Z7A4-7|PXK;;nc|ENSG00000168297|Q7Z7A4-3|PXK;;ENSG00000168297|ENST00000356151|PXK 7.558046658833821 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2348 9.8271 800.0 10379.0 25 0 1816.6 + -1 PRCKKPRPRCE 11 20 713.8818306812917 0 713.8817626833916 PEAK CID FTMS 0 0 0 2346 121922.3515625 0.0626574540414229 176 -1.5898523330688477 2 Carbamidomethyl (C) _PRCKKPRPRC(Carbamidomethyl (C))E_ REV__ENSG00000150938|ENST00000280527|CRIM1 0.3070304955306653 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.351 18062.3 0.449999988079071 80 2266 2346 DOHH2_400M_050219_2,2348 DOHH2_400M_050219_2,2348,PRCKKPRPRCE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2355 9.8636 800.0 62888.0 25 0 3297.9 + 6946 EEHLESHKKY 10 85 650.3204932671973 1298.6264336011943 2 650.3193237185478 MULTI CID FTMS 0 0 0 2354 50322.93359375 0.4997804990856456 1 -0.0163764953613281 1 Unmodified _EEHLESHKKY_ nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2 76.41605946988834 0.0187299535364035 2 EEH{I|L}E[HS]KKY 10 0 + 72.765 0.0 0.0 5.6032 5.6032 90.966 0.0 0.0 0.0 31.53034846546202 14.57203416424356 14.57203416424356 39.6242078108192 0 1.9291746928241125 2.0 0.0 0.3807196863200844 + + EEH{I|L}E[HS]KKY;[QA]KKHSE{I|L}{M(Oxidation (M))|F}[DP];{[ET]|[MV]}{M(Oxidation (M))|F}{I|L}E[RK][DV]Y;{[ET]|[MV]}{M(Oxidation (M))|F}{I|L}E[RK]H[HC];[QA][HC]HK{I|L}[DG]KY;[QA][HC]H{[RE]|[WV]}KKY;[HK]SE{I|L}KHEEY;[HS]KE{I|L}KHEEY;[QA][HC]HK{[RE]|[WV]}KY;[QA]KKHS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[DP] 5.6032;2.552;2.1448;1.9916;1.5594;1.556;1.5456;1.5456;1.4204;1.2643 +;-;-;-;-;-;-;-;-;- + 235 + 1 2.351 42484.1 0.4300000071525574 81 2272 2354 DOHH2_400M_050219_2,2355 DOHH2_400M_050219_2,2355,EEHLESHKKY True True EEHLESHKKY 9.8636382 650.319323718548 2711562.0 2354.0 nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2;;nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2;;nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2;;nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2;;nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2 6.138211727142334 2.0 True 10.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 2358 9.879 497.0 245060.0 25 0 22466.0 + 22823 LRKRREQL 8 127 366.9000653849727 1097.678366755118 3 366.9001953005791 MULTI CID FTMS 0 0 0 2357 82445.6328125 0.4556370236780943 15 -0.1054697036743164 1 Unmodified _LRKRREQL_ ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC 14.838274106304384 0.6917062315640577 2 {I|L}Q{M(Oxidation (M))|F} 3 6 30.445 0.0 0.0 2.7736 0.0 0.0 0.0 706.4573502609655 706.4573502609655 15.841218823962109 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}Q{M(Oxidation (M))|F} 2.7736 - 28 + 1 2.351 102006.7 1.0 82 2274 2357 DOHH2_400M_050219_2,2358 DOHH2_400M_050219_2,2358,LRKRREQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2362 9.9035 800.0 27314.0 25 0 1526.1 + 26635 NWNFMSQYWPI 11 33 743.3349414986012 0 743.3351318240166 PEAK CID FTMS 0 0 0 2361 47387.33984375 0.7987684338701032 1 -0.0163679122924804 1 Unmodified _NWNFMSQYWPI_ REV__nc|ENSG807|P61550|ERVS71-1 1.0714618166137932 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.351 24938.5 0.3199999928474426 83 2277 2361 DOHH2_400M_050219_2,2362 DOHH2_400M_050219_2,2362,NWNFMSQYWPI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2365 9.9237 800.0 101900.0 25 0 5980.9 + -1 CKQCCHRCTW 10 101 499.1973761538635 1494.5702990617906 3 499.1976501345634 MULTI CID FTMS 0 0 0 2364 89869.9609375 0.327193977973468 -33 0.2590131759643554 1 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))KQC(Carbamidomethyl (C))C(Carbamidomethyl (C))HRC(Carbamidomethyl (C))TW_ REV__ENSG00000103528|ENST00000355377|SYT17 0.6976657623105312 0.723409379185497 2 {[QD]|[EN]|[WG]|[KD]|[RS]}TGAHSEDAV 11 -1 48.691 0.0 0.0 3.2579 0.0 0.0 0.0 381.05237565914985 381.05237565914985 34.610954888138075 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.4247425010840047 {[QD]|[EN]|[WG]|[KD]|[RS]}TGAHSEDAV 3.2579 - 674 1 2.351 68128.0 0.449999988079071 84 2279 2364 DOHH2_400M_050219_2,2365 DOHH2_400M_050219_2,2365,CKQCCHRCTW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2369 9.9482 800.0 91575.0 25 0 6621.1 + 26407 NTDPNGPTHA 10 119 512.2279517000684 1022.4413504669368 2 512.2282592654228 MULTI CID FTMS 0 0 0 2368 64688.16796875 0.1089754275583059 -29 0.2153902053833007 1 Unmodified _NTDPNGPTHA_ ENSG00000103365|ENST00000309859|GGA2 79.59630418116434 0.0173986606250113 2 {[QS]|[NT]}DPNGPT[HA] 10 0 + 66.732 0.0 0.0 6.5267 6.5267 92.382 0.0 0.0 0.0 53.76078152608656 5.98181473782688 5.98181473782688 17.65938950717935 0 0.805462187404089 1.6989700043360187 0.3807196863200844 0.8494850021680094 + + {[QS]|[NT]}DPNGPT[HA];{[QS]|[NT]}DPGGGPT[HA];{[QS]|[NT]}DP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[DA]|[EG]}{M(Oxidation (M))|F};{[QS]|[NT]}YYGPT[HA];{[QS]|[NT]}D[QA]AAW{M(Oxidation (M))|F};[H{I|L}][C(Carbamidomethyl (C))M]GPT[HA] 6.5267;4.7995;3.0335;2.8464;2.0581;0.40127 +;-;-;-;-;- + 504 + 1 2.351 62656.8 0.4600000083446502 85 2282 2368 DOHH2_400M_050219_2,2369 DOHH2_400M_050219_2,2369,NTDPNGPTHA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2371 9.953 75.0 763970.0 25 0 90422.0 + -1 IQRLETMK 8 82 517.7865266814281 1033.558500429656 2 517.7868530154228 MULTI CID FTMS 0 0 0 2370 754172.5 0.9322833740444428 -2 0.0204286575317382 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 2 T{M(Oxidation (M))|F}K 3 -1 29.838 0.0 0.0 2.8869 0.0 0.0 639.3691826579749 0.0 639.3691826579749 0.0 7.314761492627255 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.2302046884880938 T{M(Oxidation (M))|F}K 2.8869 + + 106 + 1 2.351 51928.3 1.0 86 2283 2370 DOHH2_400M_050219_2,2371 DOHH2_400M_050219_2,2371,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2387 10.02 474.0 59889.0 25 0 33674.0 + -1 HMFECYERT 9 30 636.7587237177803 0 636.7585327029228 PEAK CID FTMS 0 0 0 2386 232891.828125 0.8120653048593454 40 -0.5025949478149414 1 Carbamidomethyl (C) _HMFEC(Carbamidomethyl (C))YERT_ REV__ENSG00000129667|ENST00000675367|RHBDF2;REV__ENST00000590168.5_1_17:74469085-74473795:-|nuORF;REV__nc|ENSG00000129667|Q6PJF5|RHBDF2 0.6014990680409731 0.3444685223463735 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.351 26852.0 1.0 87 2298 2386 DOHH2_400M_050219_2,2387 DOHH2_400M_050219_2,2387,HMFECYERT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2399 10.077 800.0 92763.0 25 0 8050.8 -1 0 65 475.0381247707598 0 475.0378295779228 PEAK CID FTMS 0 0 0 2398 31009.341796875 0.4698717724100262 1 -0.0439987182617187 1 2 G 1 -1 4.6041 0.0 0.0 0.48563 0.0 0.0 288.72528411007585 599.2912081354124 888.0164922454883 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.48563 - 10 + 1 2.351 65307.1 0.3700000047683716 88 2309 2398 DOHH2_400M_050219_2,2399 DOHH2_400M_050219_2,2399, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2400 10.091 800.0 216100.0 25 0 8052.5 37142 THPDQAEK 8 167 463.22230521946943 924.4300575057388 2 463.2218200564384 MULTI CID FTMS 0 0 0 2398 132769.5 0.3442513365734229 -12 0.0549983978271484 2 Unmodified _THPDQAEK_ ENST00000546949.5_1_19:58514261-58515786:+|nuORF 49.93300154707207 0.1395624531867191 2 HVDAAEK 7 3 58.738 0.0 0.0 6.354 0.0 0.0 156.0524651018158 0.0 156.0524651018158 0.0 34.12752999567962 0.0 0.0 0 2.614605189013355 0.0 0.6643943297944485 0.3252574989159953 HVDAAEK 6.354 - 743 + 1 2.351 133721.7 0.5099999904632568 89 2309 2398 DOHH2_400M_050219_2,2400 DOHH2_400M_050219_2,2400,THPDQAEK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2401 10.104 800.0 108210.0 25 0 6306.7 + 38613 TTEQHGARY 9 108 531.751828977391 1061.489105021582 2 531.7518188357353 MULTI CID FTMS 0 0 0 2398 97714.5390625 0.8853538410920986 -7 0.0279674530029296 3 Unmodified _TTEQHGARY_ ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272047-33272452:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP 60.07390631473393 0.0260411565414776 2 TTEQHGARY 9 0 + 92.066 0.0 0.0 8.6733 8.6733 89.494 0.0 0.0 0.0 32.37787700334292 9.985739448312785 9.985739448312785 6.478174818886373 0 0.9749073637206092 2.0 0.4247425010840047 0.4247425010840047 + + TTEQHGARY;TTEQHQRY;TTE[AG]HGARY;TTEQHYRQ;TTE[AG]HQRY;TTEQYHRQ;TTE[AG]HYRQ;TTE[AG]YHRQ;TTEYQHRQ;TTE{[CP]|[EA]}{[TV]|[{I|L}S]}QSP 8.6733;8.063;7.8058;7.7326;7.1905;7.1654;6.86;6.2928;6.2664;6.015 +;-;-;-;-;-;-;-;-;- + 1098 + 1 2.351 71791.8 0.449999988079071 90 2309 2398 DOHH2_400M_050219_2,2401 DOHH2_400M_050219_2,2401,TTEQHGARY True True TTEQHGARY 10.104337 531.751818835735 645697.6875 2398.0 ENST00000480730.5_1_6:33272047-33272452:-|nuORF;;nc|ENSG00000231925|O15533-4|TAPBP;;nc|ENSG00000231925|O15533-3|TAPBP;;nc|ENSG00000231925|O15533-2|TAPBP;;ENSG00000231925|ENST00000434618|TAPBP 6.58571179707845 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2404 10.114 131.0 633570.0 25 0 90800.0 + 35991 SVQHVDAAEK 10 98 361.85250802122914 1082.5356946638874 3 361.8523132205009 MULTI CID FTMS 0 0 0 2403 435460.8125 0.009443167152898 -13 0.0991640090942382 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 37.07464296494664 0.1884581770199685 2 [VS]QHVDAAEK 10 0 [VS]Q + + 37.057 22.24 7.0793 3.4231 3.4231 49.922 0.0 0.0 0.0 0.0 8.85229175257237 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.3252574989159953 + + [VS]QHVDAAEK 3.4231 + + 428 + 1 2.351 73081.1 1.0 91 2311 2403 DOHH2_400M_050219_2,2404 DOHH2_400M_050219_2,2404,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2405 10.127 800.0 100640.0 25 0 7817.5 36289 SYHVTNGSQQG 11 97 589.2649974777794 1176.515442022359 2 589.2648193240166 MULTI CID FTMS 0 0 0 2403 80061.1640625 0.4587487642495169 -4 0.0561914443969726 2 Unmodified _SYHVTNGSQQG_ ENST00000546332.1_1_X:15288045-15288583:-|nuORF 23.78978130925829 0.5336113198261219 2 [AG]DAQ{M(Oxidation (M))|F}GAQQD 11 8 58.306 0.0 0.0 4.9558 0.0 0.0 0.0 85.04097327805098 85.04097327805098 46.377615977437095 0.0 0.0 0.0 0 1.492992819099939 1.5228787452803376 0.8851518780601922 0.8494850021680094 [AG]DAQ{M(Oxidation (M))|F}GAQQD 4.9558 - 1907 1 2.351 62156.6 0.4600000083446502 92 2311 2403 DOHH2_400M_050219_2,2405 DOHH2_400M_050219_2,2405,SYHVTNGSQQG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2406 10.134 354.0 218990.0 25 0 25856.0 + 42947 VVSPKSQS 8 100 416.2321119447296 830.4496709562592 2 416.2317077517509 MULTI CID FTMS 0 0 0 2403 105674.0859375 0.013382209913951 -37 0.2407007217407226 3 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 14.838274106304384 0.6917062315640577 2 VVSPAS[SG]K 9 3 + 40.639 0.0 0.0 4.8936 4.8936 88.221 0.0 0.0 0.0 27.52468307452657 0.1938055257937918 0.1938055257937918 40.639118119517775 0 0.7742275032520141 2.0 0.0 0.1694451763165201 VVSPAS[SG]K 4.8936 - 173 + 1 2.351 66844.5 1.0 93 2311 2403 DOHH2_400M_050219_2,2406 DOHH2_400M_050219_2,2406,VVSPKSQS False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2409 10.143 71.0 896730.0 25 0 75959.0 + 35994 SVQHVDAAEK 10 87 542.2750263710653 1082.5354998089306 2 542.2751953005791 MULTI CID FTMS 0 0 0 2408 852139.875 0.0305289568706678 -11 0.1055278778076171 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 66.61675797227278 0.0192292371508206 2 [VS]QHVDAAEK 10 0 + 113.75 0.0 0.0 10.508 10.508 93.333 0.0 0.0 0.0 15.664605017734374 15.664605017734374 15.664605017734374 9.164539485499262 0 3.309894379144197 2.0 0.3807196863200844 0.7742275032520141 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAEK;[VS]QHVD[DV]GK;[VS]AGHVD[DV]GK;[VS][AG]HVD[DV]GK;[VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;WQH{[RE]|[WV]}AEK;[VS]Q{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK 10.508;9.6615;9.061;8.4059;7.62;7.5593;7.1633;6.9521;6.6738;6.6545 +;-;-;-;-;-;-;-;-;- + 1178 + 1 2.351 51002.9 1.0 94 2313 2408 DOHH2_400M_050219_2,2409 DOHH2_400M_050219_2,2409,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2410 10.157 800.0 95402.0 25 0 7925.9 + -1 DMEMYMKWKCD 11 76 748.2923823320434 1494.5702117308867 2 748.2914306521416 MULTI CID FTMS 0 0 0 2408 80256.125 0.7452907776144273 -5 0.0816192626953125 2 Oxidation (M) _DMEMYM(Oxidation (M))KWKCD_ REV__ENSG00000091436|ENST00000375213|MAP3K20 2.735195868890462 0.8622431031272658 2 T[PA]ADESHAG 10 -1 41.86 0.0 0.0 2.8008 0.0 0.0 214.0072355836801 341.1467684381469 555.1540040218271 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 T[PA]ADESHAG 2.8008 - 448 + 1 2.351 56982.7 0.3700000047683716 95 2313 2408 DOHH2_400M_050219_2,2410 DOHH2_400M_050219_2,2410,DMEMYMKWKCD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2413 10.167 170.0 207050.0 25 0 17973.0 -1 PFQCQFCDKCY 11 64 499.1973761538635 1494.5702990617906 3 499.1977416872978 MULTI CID FTMS 0 0 0 2412 231924.734375 0.8443797642614969 3 -0.041757583618164 1 2 Carbamidomethyl (C) _PFQC(Carbamidomethyl (C))QFC(Carbamidomethyl (C))DKCY_ ENSG00000066422|ENST00000312938|ZBTB11 0.4545168274142398 0.8730034954726786 2 VADESHAG 8 -1 37.856 0.0 0.0 2.5329 0.0 0.0 384.0768976299626 341.14621912174067 725.2231167517033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VADESHAG 2.5329 - 179 + 1 2.351 35754.7 1.0 96 2315 2412 DOHH2_400M_050219_2,2413 DOHH2_400M_050219_2,2413,PFQCQFCDKCY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2414 10.181 800.0 113650.0 25 0 5385.7 10852 GADARHEQHS 10 117 554.2519498710744 1106.4893468089488 2 553.7459594607353 MULTI CID FTMS 0 0 0 2412 85812.984375 0.6456879235759999 -12 0.1246604919433593 2 Unmodified _GADARHEQHS_ ENST00000374884.2_2_X:62570747-62571134:-|nuORF 16.149105407346934 0.5765757077271437 2 [AG]NQ{M(Oxidation (M))|F}EAQ{[QD]|[EN]|[WG]|[KD]|[RS]} 10 6 + 54.174 0.0 0.0 4.896 4.896 76.451 0.0 0.0 0.0 3.66914666491283 0.7918124604762511 0.7918124604762511 3.66914666491283 0 0.3494850021680094 2.0 0.0 0.3054621874040891 [AG]NQ{M(Oxidation (M))|F}EAQ{[QD]|[EN]|[WG]|[KD]|[RS]};[C(Carbamidomethyl (C))R]TAT{M(Oxidation (M))|F}QSH;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QAE{M(Oxidation (M))|F}QSH;[AG]NQ{M(Oxidation (M))|F}EAN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[AG]NQ{M(Oxidation (M))|F}EA[AG]{[QD]|[EN]|[WG]|[KD]|[RS]};[AG]N[AG]{M(Oxidation (M))|F}EAQ{[QD]|[EN]|[WG]|[KD]|[RS]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NAE{M(Oxidation (M))|F}QSH;[AG]QN{M(Oxidation (M))|F}EAQ{[QD]|[EN]|[WG]|[KD]|[RS]};[C(Carbamidomethyl (C))R]TAT{M(Oxidation (M))|F}NTH;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QAE{M(Oxidation (M))|F}NTH 4.896;4.5644;4.5484;4.3519;4.0678;4.0678;4.0043;3.9741;3.8882;3.8722 -;-;-;-;-;-;-;-;-;- 2360 1 2.351 73309.0 0.4300000071525574 97 2315 2412 DOHH2_400M_050219_2,2414 DOHH2_400M_050219_2,2414,GADARHEQHS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2417 10.19 122.0 358260.0 25 0 37088.0 + 26408 NTDPNGPTHA 10 70 512.2279517000684 1022.4413504669368 2 512.2283813357353 MULTI CID FTMS 0 0 0 2416 485876.75 0.8185210407793421 6 -0.1204671859741211 1 Unmodified _NTDPNGPTHA_ ENSG00000103365|ENST00000309859|GGA2 72.96794272382148 0.0188410189619069 2 {[QS]|[NT]}DPNG[TP][HA] 10 0 + 60.749 0.0 0.0 5.9416 5.9416 90.375 0.0 0.0 0.0 52.790456128172 2.04628427264403 2.04628427264403 17.219161359540145 0 0.8252574989159953 1.6989700043360187 0.3807196863200844 0.805462187404089 + + {[QS]|[NT]}DPNG[TP][HA];{[QS]|[NT]}DPGGG[TP][HA];{[QS]|[NT]}YYG[TP][HA] 5.9416;4.2575;2.5794 +;-;- + 132 + 1 2.351 41937.4 1.0 98 2317 2416 DOHH2_400M_050219_2,2417 DOHH2_400M_050219_2,2417,NTDPNGPTHA True True NTDPNGPTHA 10.189694 512.228381335735 10640979.75 2416.0 ENSG00000103365|ENST00000309859|GGA2 9.073062896728516 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2418 10.203 750.0 295040.0 25 0 21655.0 + + 40352 QHVDAAEK 8 141 449.2250409878883 896.4355290425766 2 449.2257568240166 MULTI CID FTMS 0 0 0 2416 107524.28125 0.171083944961199 -6 0.07623291015625 2 Unmodified _VHQEAGEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 48.345845343767074 0.1470278396477103 2 QHVDAAEK 8 -1 + 71.697 0.0 0.0 7.998 7.998 85.007 0.0 0.0 0.0 55.49943017611021 20.21697743678417 20.21697743678417 3.0102999566398267 0 0.9921276860725624 0.0 0.9143943297944483 0.3807196863200844 QHVDAAEK;QHVADAEK;QHVT[C(Carbamidomethyl (C))R]P;QHV{[CT]|[{M(Oxidation (M))|F}G]}{[NV]|[RG]}P;QHVA{[CA]|SS}[TA]P;QHVT[SG][TA]P;[RH]AAN[MT]P;QH[R{M(Oxidation (M))|F}]{[NV]|[RG]}P;[RH]AT[C(Carbamidomethyl (C))R]P;QH[R{M(Oxidation (M))|F}]AAAP 7.998;7.6622;3.1375;2.0505;1.92;1.8119;1.1222;0.63969;0.63485;0.575 -;-;-;-;-;-;-;-;-;- 732 + 1 2.351 177643.4 1.0 99 2317 2416 DOHH2_400M_050219_2,2418 DOHH2_400M_050219_2,2418,VHQEAGEK False False QHVDAAEK 10.202676 449.225756824017 4345601.5 2416.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 6.245646317799886 2.0 False 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 2420 10.213 426.0 188500.0 25 0 21048.0 + -1 IQRLETMK 8 90 517.7865266814281 1033.558500429656 2 517.7866699099541 MULTI CID FTMS 0 0 0 2419 170641.875 0.2109419038459636 33 -0.4200286865234375 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 2 RVG[RH][TA]R 8 -1 33.268 0.0 0.0 3.2188 0.0 0.0 82.00788652203069 0.0 82.00788652203069 0.0 6.766449332505147 0.0 0.0 0 0.3807196863200844 0.0 1.555462187404089 0.2302046884880938 RVG[RH][TA]R 3.2188 - 490 + 1 2.351 66286.4 1.0 100 2318 2419 DOHH2_400M_050219_2,2420 DOHH2_400M_050219_2,2420,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2421 10.22 377.0 181340.0 25 0 8951.7 + 34585 SPHEAAVS 8 114 399.1926561719519 796.3707594107038 2 399.1923400759697 MULTI CID FTMS 0 0 0 2419 111259.0078125 0.4680653127001606 -15 0.1664180755615234 2 Unmodified _SPHEAAVS_ REV__ENST00000488290.5_1_10:30602540-30654262:-|nuORF;REV__nc|ENSG00000107951|Q9NVV4-2|MTPAP 12.531546534597751 0.7257836412119636 2 VDAAEQ 6 -1 34.059 0.0 0.0 4.2768 0.0 0.0 165.0542927472672 0.0 165.0542927472672 0.0 15.832363394466569 0.0 0.0 0 1.7104093769761874 0.0 0.0 0.0 VDAAEQ 4.2768 - 83 1 2.351 59176.4 1.0 101 2318 2419 DOHH2_400M_050219_2,2421 DOHH2_400M_050219_2,2421,SPHEAAVS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2424 10.24 800.0 90394.0 25 0 4162.7 + -1 MGYFCMAEK 9 110 568.7311804787682 1135.4478080243364 2 568.7304565310478 MULTI CID FTMS 0 0 0 2423 103413.828125 0.3859675447125038 -5 0.0623807907104492 1 Carbamidomethyl (C) _MGYFC(Carbamidomethyl (C))MAEK_ REV__ENST00000607690.1_1_2:190531048-190531108:+|nuORF 14.838274106304384 0.4350285940865338 2 AAEK 4 -1 37.423 0.0 0.0 3.2959 0.0 0.0 718.2254397155458 0.0 718.2254397155458 0.0 23.610469015915783 0.0 0.0 0 0.3252574989159953 0.0 0.5 0.3252574989159953 AAEK 3.2959 - 100 + 1 2.351 58722.1 0.5199999809265137 102 2320 2423 DOHH2_400M_050219_2,2424 DOHH2_400M_050219_2,2424,MGYFCMAEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2425 10.247 437.0 264330.0 25 0 32751.0 22688 LQDHSVAQEK 10 136 385.5315063960307 1153.572689788292 3 385.5316650271416 MULTI CID FTMS 0 0 0 2423 93544.890625 0.5256738329696767 -5 0.0623807907104492 2 Unmodified _LQDHSVAQEK_ ENSG00000205213|ENST00000379214|LGR4;nc|ENSG00000205213|Q9BXB1-2|LGR4 17.11289562659939 0.5604042439455784 2 [VS]AQ{M(Oxidation (M))|F}AVH 8 8 51.946 0.0 0.0 4.503 0.0 0.0 0.0 311.1320711815836 311.1320711815836 36.23220787163461 0.0 0.0 0.0 0 0.5 2.0 0.659097005026964 0.0 [VS]AQ{M(Oxidation (M))|F}AVH 4.503 - 866 1 2.351 96281.0 1.0 103 2320 2423 DOHH2_400M_050219_2,2425 DOHH2_400M_050219_2,2425,LQDHSVAQEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2428 10.269 800.0 152610.0 25 0 10143.0 -1 GQTDMCRCSK 10 112 572.731271190771 1143.447989448342 2 572.7325317263603 MULTI CID FTMS 0 0 0 2427 117496.0078125 0.7402347706779108 -1 0.003890037536621 1 Oxidation (M) _GQTDM(Oxidation (M))CRCSK_ ENSG00000118322|ENST00000327245|ATP10B 13.042465956692816 0.6287021003332052 2 HVDAAEK 7 -1 49.232 0.0 0.0 4.3055 0.0 0.0 375.066838180567 0.0 375.066838180567 0.0 14.3296100436755 0.0 0.0 0 0.2742275032520141 0.0 0.805462187404089 0.2887254899964357 HVDAAEK 4.3055 - 496 + 1 2.333 94911.3 0.6899999976158142 104 2322 2427 DOHH2_400M_050219_2,2428 DOHH2_400M_050219_2,2428,GQTDMCRCSK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2429 10.278 520.0 265500.0 25 0 21502.0 14409 IFIHQCVQL 9 135 367.5355438156415 1099.5848020471244 3 367.5356017947197 MULTI CID FTMS 0 0 0 2427 109124.28125 0.2222159505267163 -16 0.2027158737182617 2 Unmodified _IFIHQCVQL_ ENSG00000151490|ENST00000281171|PTPRO;nc|ENSG00000151490|Q16827-2|PTPRO;nc|ENSG00000151490|Q16827-3|PTPRO;nc|ENSG00000151490|Q16827-4|PTPRO 17.11289562659939 0.3734572693229295 2 {I|L}E 2 8 25.789 0.0 0.0 2.3454 0.0 0.0 0.0 854.4364570200412 854.4364570200412 10.511808472566091 0.0 0.0 0.0 0 0.0572869970894639 0.0 0.4247425010840047 0.0 {I|L}E 2.3454 - 51 + 1 2.333 112489.7 1.0 105 2322 2427 DOHH2_400M_050219_2,2429 DOHH2_400M_050219_2,2429,IFIHQCVQL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2430 10.292 800.0 84250.0 25 0 3475.6 -1 VLDEFKMEK 9 95 577.793031702582 1153.5715104719638 2 577.7941161990166 MULTI CID FTMS 0 0 0 2427 76942.0625 0.9559295810533724 1 -0.0540809631347656 3 Oxidation (M) _VLDEFKM(Oxidation (M))EK_ ENSG00000164604|ENST00000424100|GPR85 20.41453444215458 0.284085796332423 2 [VS]AGHVDAAAEK 12 -1 + 85.892 0.0 0.0 7.4458 7.4458 84.785 0.0 0.0 0.0 15.07438328311494 55.34592400893486 15.07438328311494 3.601514477826385 0 3.337180496500464 2.0 0.25 0.0 [VS]AGHVDAAAEK;[VS]QHVDAAAEK;[VS]AGHVD{[NV]|[RG]}EK;[VS]AGHVD{[RE]|[WV]}GK;[VS]AGHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AEK;[VS]QHVD{[NV]|[RG]}EK;[VS]QHVD{[RE]|[WV]}GK;[VS]QHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAAEK;[WQ]HVD{[NV]|[RG]}EK 7.4458;7.1336;6.6074;6.5654;6.5421;6.2983;6.2563;6.2331;5.5525;5.4638 -;-;-;-;-;-;-;-;-;- 865 1 2.333 54851.0 0.6100000143051147 106 2322 2427 DOHH2_400M_050219_2,2430 DOHH2_400M_050219_2,2430,VLDEFKMEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2431 10.306 800.0 77735.0 25 0 11516.0 -1 0 55 849.1601871441054 0 849.1598388552666 PEAK CID FTMS 0 0 0 2427 97220.2109375 1.0 0 0.0 4 2 SVQ{[MS]|[{M(Oxidation (M))|F}A]}VHGAG 10 -1 34.307 0.0 0.0 2.0225 0.0 0.0 613.7680013813405 126.05681787662344 739.8248192579639 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.4247425010840047 SVQ{[MS]|[{M(Oxidation (M))|F}A]}VHGAG 2.0225 - 824 + 1 2.333 49342.6 0.5600000023841858 107 2322 2427 DOHH2_400M_050219_2,2431 DOHH2_400M_050219_2,2431, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2434 10.328 800.0 31594.0 25 0 1794.9 + -1 DVVFNHPCK 9 62 558.2680541872978 0 558.2680541872978 PEAK CID FTMS 0 0 0 -1 0 1 Carbamidomethyl (C) _DVVFNHPC(Carbamidomethyl (C))K_ REV__ENSG00000178568|ENST00000342788|ERBB4;REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF;REV__nc|ENSG00000178568|Q15303-2|ERBB4;REV__nc|ENSG00000178568|Q15303-3|ERBB4;REV__nc|ENSG00000178568|Q15303-4|ERBB4 7.910154910731844 0.3362437653303669 2 P 1 -1 4.6041 0.0 0.0 0.4131 0.0 0.0 773.3624805896362 241.0847109430297 1014.447191532666 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.4131 + + 2 + 1 2.333 27558.5 0.75 108 2324 2433 DOHH2_400M_050219_2,2434 DOHH2_400M_050219_2,2434,DVVFNHPCK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2436 10.344 800.0 235360.0 25 0 20442.0 37143 THPDQAEK 8 151 463.22230521946943 924.4300575057388 2 463.2228271365166 MULTI CID FTMS 0 0 0 2435 157810.953125 0.4091800567088604 4 -0.0730466842651367 1 Unmodified _THPDQAEK_ ENST00000546949.5_1_19:58514261-58515786:+|nuORF 41.8396318013385 0.2035142800366642 2 HVDAAEK 7 3 52.088 0.0 0.0 5.6346 0.0 0.0 156.05326628792767 0.0 156.05326628792767 0.0 40.40517053068058 0.0 0.0 0 2.2856668758921828 0.0 0.3494850021680094 0.3252574989159953 HVDAAEK 5.6346 - 734 + 1 2.333 148407.0 0.7300000190734863 109 2325 2435 DOHH2_400M_050219_2,2436 DOHH2_400M_050219_2,2436,THPDQAEK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2437 10.358 800.0 109440.0 25 0 25282.0 8337 ERQRRNEL 8 76 550.7993197940625 1099.584086654925 2 550.7980834841728 MULTI CID FTMS 0 0 0 2435 88287.1953125 0.8026486046432013 -6 0.1079587936401367 2 Unmodified _ERQRRNEL_ ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC 5.731851221503515 0.7895402735786415 2 {I|L}{M(Oxidation (M))|F} 2 8 20.969 0.0 0.0 1.907 0.0 0.0 0.0 836.4230090069649 836.4230090069649 10.131644693611744 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.907 - 15 + 1 2.333 72616.5 0.550000011920929 110 2325 2435 DOHH2_400M_050219_2,2437 DOHH2_400M_050219_2,2437,ERQRRNEL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2440 10.366 1.4 35027000.0 25 0 5726500.0 + 35992 SVQHVDAAEK 10 76 361.85250802122914 1082.5356946638874 3 361.8527709841728 MULTI CID FTMS 0 0 0 2439 31746622.0 0.6884400374967591 3 -0.0439205169677734 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 2 [VS]AGHVDAAEK 11 2 [VS]AG + + 41.975 24.654 7.8475 3.8775 3.8775 51.277 0.0 0.0 0.0 0.0 15.830954751883796 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3054621874040891 [VS]AGHVDAAEK 3.8775 - 293 + 1 2.302 44620.2 1.0 111 2327 2439 DOHH2_400M_050219_2,2440 DOHH2_400M_050219_2,2440,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2441 10.38 800.0 106490.0 25 0 12446.0 + -1 KESESPCER 9 86 561.2493954381406 1120.484237943081 2 561.2490112185478 MULTI CID FTMS 0 0 0 2439 107783.859375 0.9768248325574715 2 -0.0393352508544921 2 Carbamidomethyl (C) _KESESPC(Carbamidomethyl (C))ER_ REV__ENSG00000171792|ENST00000489288|RHNO1;REV__ENST00000464682.2_1_12:2986445-2997622:+|nuORF;REV__nc|ENSG00000171792|Q9BSD3-2|RHNO1 15.248480904072842 0.4239247793462406 2 K{M(Oxidation (M))|F}AAC(Carbamidomethyl (C)) 5 -1 40.049 0.0 0.0 3.5743 0.0 0.0 0.0 540.1998995416624 540.1998995416624 16.861818737241734 0.0 0.0 0.0 0 1.1861818737241734 0.0 0.0 0.0 K{M(Oxidation (M))|F}AAC(Carbamidomethyl (C)) 3.5743 - 69 + 1 2.302 71632.9 0.6299999952316284 112 2327 2439 DOHH2_400M_050219_2,2441 DOHH2_400M_050219_2,2441,KESESPCER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2442 10.387 430.0 246140.0 25 0 12875.0 20111 LKESSRYGL 9 146 351.5297417316845 1051.5673957952536 3 351.8640930056572 MULTI CID FTMS 0 0 0 2439 88446.875 0.4535761530130009 -9 0.1584453582763672 3 Unmodified _LKESSRYGL_ ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH 25.399314129420983 0.2080152500878129 2 {I|L}E 2 7 18.513 0.0 0.0 1.7606 0.0 0.0 0.0 806.4181319668177 806.4181319668177 3.9093282777197658 0.0 0.0 0.0 0 0.2059771852360797 0.0 0.0 0.0 {I|L}E 1.7606 - 186 + 1 2.302 88729.6 1.0 113 2327 2439 DOHH2_400M_050219_2,2442 DOHH2_400M_050219_2,2442,LKESSRYGL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2444 10.392 19.0 2788900.0 25 0 524490.0 42822 VVLDNSGK 8 63 416.2321119447296 830.4496709562592 2 416.2321960330009 MULTI CID FTMS 0 0 0 2443 3460390.25 0.4382121529499464 -20 0.3308591842651367 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 23.1484247019978 0.5573009939494978 2 VVSPASS[KG] 9 4 + 71.589 0.0 0.0 8.6205 8.6205 98.81 0.0 0.0 0.0 49.72952454021232 5.629005157155831 5.629005157155831 71.58924985774085 0 0.8494850021680094 2.0 0.75 0.3252574989159953 VVSPASS[KG] 8.6205 - 79 + 1 2.302 47789.1 1.0 114 2328 2443 DOHH2_400M_050219_2,2444 DOHH2_400M_050219_2,2444,VVLDNSGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2445 10.401 473.0 204390.0 25 0 11280.0 8269 EQIQEMAEK 9 116 553.2657296205433 1104.5169063078863 2 553.2660400271416 MULTI CID FTMS 0 0 0 2443 104344.7421875 0.7009646411941184 4 -0.0256366729736328 2 Unmodified _EQIQEMAEK_ ENSG00000091656|ENST00000651372|ZFHX4;nc|ENSG00000091656|Q86UP3-2|ZFHX4;nc|ENSG00000091656|Q86UP3-4|ZFHX4;nc|ENSG00000091656|Q86UP3|ZFHX4;ZFHX4|p.S2155G|1|0.17|ENSG00000091656|chr8:76853384-76853384|A/G|missense_variant 28.49450938151212 0.1686335738423394 2 WQHC{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK 8 5 + 55.103 0.0 0.0 4.9889 4.9889 80.481 0.0 0.0 0.0 15.74469663085663 5.750029273583195 5.750029273583195 6.9338887860467935 0 1.66944517631652 0.0 0.3494850021680094 0.6989700043360187 WQHC{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]QHVD{[{M(Oxidation (M))|F}H]|[RQ]}H;[VS]AGHCYNVR;W[AG]HC{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]QHCV[YR]N;[VS]AG{[QS]|[NT]}{[MG]|[TS]}QQ{I|L};[VS]QHCYNVR;[VS]AGHVCHQ[PA];[VS]A{[DS]|[MA]|[CV]|TT}EEQQ{I|L};[VS]A[RH]CHQ[PA] 4.9889;4.3611;4.2782;4.1503;4.1411;4.0929;3.9952;3.9296;3.8706;3.863 -;-;-;-;-;-;-;-;-;- 2501 + 1 2.302 77838.0 1.0 115 2328 2443 DOHH2_400M_050219_2,2445 DOHH2_400M_050219_2,2445,EQIQEMAEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2447 10.405 4.8 11331000.0 25 0 887070.0 + 35995 SVQHVDAAEK 10 83 542.2750263710653 1082.5354998089306 2 542.2755615115166 MULTI CID FTMS 0 0 0 2446 12225945.0 0.4380094847787257 5 -0.0477714538574218 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 2 [VS]QHVDAAEK 10 0 + 106.75 0.0 0.0 9.8611 9.8611 92.786 0.0 0.0 0.0 77.58146596900417 17.39909385331508 17.39909385331508 9.164539485499247 0 2.916386562212267 2.0 0.5 0.8252574989159953 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVD[DV]GK;[VS]AGHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EQ;[VS]QHVD[DV]GK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]QHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EQ;[VS]AG{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T]GK;[VS][KC][TA]{M(Oxidation (M))|F}AEK;[VS][KC]D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK 9.8611;9.0146;6.2968;6.1342;5.6894;5.6015;5.5308;5.4303;5.1844;5.0913 +;-;-;-;-;-;-;-;-;- + 675 + 1 2.302 48788.2 1.0 116 2329 2446 DOHH2_400M_050219_2,2447 DOHH2_400M_050219_2,2447,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2452 10.434 800.0 62870.0 25 0 3688.8 -1 LFCCVFCCNEK 11 76 493.8658073239424 1478.575592572027 3 493.8660461306572 MULTI CID FTMS 0 0 0 2451 99208.0 1.0 0 0.0 1 3 Carbamidomethyl (C) _LFC(Carbamidomethyl (C))C(Carbamidomethyl (C))VFC(Carbamidomethyl (C))CNEK_ ENSG00000156284|ENST00000399899|CLDN8 6.234356020891411 0.8457338374961867 2 [PA]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HSEDAV 11 -1 39.72 0.0 0.0 2.6864 0.0 0.0 0.0 274.04670893401175 274.04670893401175 24.63159103297397 0.0 0.0 0.0 0 0.0 0.958607314841775 0.2302046884880938 0.0 [PA]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HSEDAV 2.6864 - 435 1 2.286 48181.2 0.5899999737739563 117 2333 2451 DOHH2_400M_050219_2,2452 DOHH2_400M_050219_2,2452,LFCCVFCCNEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2453 10.448 800.0 168070.0 25 0 12373.0 + 8055 ENQTVEEMK 9 135 554.2519498710744 1106.4893468089488 2 553.7467529177666 MULTI CID FTMS 0 0 0 2451 111890.2265625 0.8419025230712798 6 -0.0991735458374023 2 Unmodified _ENQTVEEMK_ ENSG00000185149|ENST00000329476|NPY2R 53.832793166522166 0.0319663582346103 2 {M(Oxidation (M))|F}GGQAE{M(Oxidation (M))|F}QSH 10 9 + 65.505 0.0 0.0 5.92 5.92 75.929 0.0 0.0 0.0 6.422264452979107 6.422264452979107 6.422264452979107 0.4139268515822607 0 0.0 0.0 0.0 0.5941876774005248 {M(Oxidation (M))|F}GGQAE{M(Oxidation (M))|F}QSH;{M(Oxidation (M))|F}GGAGAE{M(Oxidation (M))|F}QSH;{M(Oxidation (M))|F}NQAE{M(Oxidation (M))|F}QSH;{M(Oxidation (M))|F}NAGAE{M(Oxidation (M))|F}QSH;{M(Oxidation (M))|F}GGQAE{M(Oxidation (M))|F}NTH;{M(Oxidation (M))|F}GGAGAE{M(Oxidation (M))|F}NTH;{M(Oxidation (M))|F}GANAE{M(Oxidation (M))|F}QSH;[AG]NQ{M(Oxidation (M))|F}EAQDK;{M(Oxidation (M))|F}GAGGAE{M(Oxidation (M))|F}QSH;[AG]NQ{M(Oxidation (M))|F}EAQGW 5.92;5.8826;5.6018;5.5604;5.4283;5.3909;5.3759;5.3396;5.3385;5.3356 -;-;-;-;-;-;-;-;-;- 12752 + 1 2.286 106188.9 0.6299999952316284 118 2333 2451 DOHH2_400M_050219_2,2453 DOHH2_400M_050219_2,2453,ENQTVEEMK True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2455 10.457 339.0 357700.0 25 0 32618.0 + 29267 QHPSTASAV 9 121 449.2250409878883 896.4355290425766 2 449.2252685427666 MULTI CID FTMS 0 0 0 2454 139134.921875 0.2213802411838324 11 -0.1375837326049804 1 Unmodified _QHPSTASAV_ REV__ENSG00000170325|ENST00000360871|PRDM10;REV__nc|ENSG00000170325|Q9NQV6-1|PRDM10;REV__nc|ENSG00000170325|Q9NQV6-5|PRDM10;REV__nc|ENSG00000170325|Q9NQV6-6|PRDM10;REV__nc|ENSG00000170325|Q9NQV6-7|PRDM10;REV__nc|ENSG00000170325|Q9NQV6|PRDM10 24.020572477871973 0.2255576514309169 2 QHVDAAEK 8 -1 + 58.869 0.0 0.0 6.567 6.567 80.916 0.0 0.0 0.0 40.91042248108352 20.216977436784163 20.216977436784163 2.430380486862944 0 0.2742275032520141 0.0 0.3494850021680094 0.3807196863200844 QHVDAAEK;QHVADAEK;QHVT{[CA]|SS}A[PA];QHVA{[CA]|SS}T[PA];QHVT[SG]T[PA];[RH]AA{[CT]|[{M(Oxidation (M))|F}G]}A[PA] 6.567;6.2959;2.2768;2.0519;1.8329;0.098227 -;-;-;-;-;- 556 + 1 2.286 97359.2 1.0 119 2334 2454 DOHH2_400M_050219_2,2455 DOHH2_400M_050219_2,2455,QHPSTASAV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2456 10.471 800.0 75750.0 25 0 4921.2 + 26409 NTDPNGPTHA 10 113 512.2279517000684 1022.4413504669368 2 512.2281982302666 MULTI CID FTMS 0 0 0 2454 97972.7734375 0.1650475691255059 23 -0.2003450393676757 2 Unmodified _NTDPNGPTHA_ ENSG00000103365|ENST00000309859|GGA2 63.960520009940105 0.0261970246776379 2 {[QS]|[NT]}D[HK]PD 7 6 57.892 0.0 0.0 5.6621 0.0 0.0 0.0 212.06833956289293 212.06833956289293 47.29620320823132 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.110924374808178 1.079689690656103 {[QS]|[NT]}D[HK]PD 5.6621 - 153 1 2.286 50728.2 0.4399999976158142 120 2334 2454 DOHH2_400M_050219_2,2456 DOHH2_400M_050219_2,2456,NTDPNGPTHA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2458 10.478 247.0 233230.0 25 0 15754.0 + 34586 SPHEAAVS 8 97 399.1926561719519 796.3707594107038 2 399.1924926638603 MULTI CID FTMS 0 0 0 2457 171864.125 0.7230303145039068 2 -0.0247373580932617 1 Unmodified _SPHEAAVS_ REV__ENST00000488290.5_1_10:30602540-30654262:-|nuORF;REV__nc|ENSG00000107951|Q9NVV4-2|MTPAP 12.531546534597751 0.7257836412119636 2 DAAEK 5 -1 36.93 0.0 0.0 4.6373 0.0 0.0 264.1211389046476 0.0 264.1211389046476 0.0 28.20615965204567 0.0 0.0 0 1.6989700043360187 0.0 0.8807196863200843 0.3252574989159953 DAAEK 4.6373 - 51 + 1 2.286 49091.1 1.0 121 2335 2457 DOHH2_400M_050219_2,2458 DOHH2_400M_050219_2,2458,SPHEAAVS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2459 10.481 145.0 532070.0 25 0 105160.0 + 12578 GVIELQRYG 9 78 517.786440369765 1033.55832780633 2 517.7868530154228 MULTI CID FTMS 0 0 0 2457 416621.0625 0.2082068442415677 -26 0.4104013442993164 2 Unmodified _GVIELQRYG_ REV__ENSG00000130714|ENST00000402686|POMT1;REV__nc|ENSG00000130714|Q9Y6A1-3|POMT1;REV__nc|ENSG00000130714|Q9Y6A1-4|POMT1;REV__nc|ENSG00000130714|Q9Y6A1|POMT1 6.723162845929126 0.6799819581413107 2 KT[RH][WP]K 7 -1 21.485 0.0 0.0 2.0787 0.0 0.0 82.0076319004282 0.0 82.0076319004282 0.0 10.030895343140884 0.0 0.0 0 0.0 0.0 0.805462187404089 0.2215141619232908 KT[RH][WP]K 2.0787 - 70 + 1 2.286 65697.1 1.0 122 2335 2457 DOHH2_400M_050219_2,2459 DOHH2_400M_050219_2,2459,GVIELQRYG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2460 10.491 612.0 137090.0 25 0 11267.0 25404 NEADAWREY 9 116 577.2468365164551 1152.47912009971 2 577.2468139529228 MULTI CID FTMS 0 0 0 2457 95880.4140625 0.2208808956948871 -22 0.3328409194946289 3 Unmodified _NEADAWREY_ ENST00000541972.5_1_12:7651687-7653742:-|nuORF 13.90604991867851 0.4602628045680013 2 DEAQQ{[QG]|[NA]} 7 7 39.965 0.0 0.0 3.4678 0.0 0.0 378.16556805120285 0.0 378.16556805120285 0.0 23.49103494084932 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 DEAQQ{[QG]|[NA]} 3.4678 - 253 1 2.286 67138.3 1.0 123 2335 2457 DOHH2_400M_050219_2,2460 DOHH2_400M_050219_2,2460,NEADAWREY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2463 10.512 800.0 161560.0 25 0 49399.0 + 19770 LGRKREAA 8 121 450.7720661998047 899.5295794664095 2 450.7720519900322 MULTI CID FTMS 0 0 0 2462 123971.21875 0.5950455308763157 -4 0.0787229537963867 1 Unmodified _LGRKREAA_ REV__ENSG00000143079|ENST00000271277|CTTNBP2NL 13.50788311687929 0.7113601687236069 2 {[VA]|[{I|L}G]}R 3 -1 16.54 0.0 0.0 1.8387 0.0 0.0 0.0 570.3011913651001 570.3011913651001 3.1815261089671303 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.0 0.0 {[VA]|[{I|L}G]}R 1.8387 + + 74 1 2.286 104137.3 0.5199999809265137 124 2337 2462 DOHH2_400M_050219_2,2463 DOHH2_400M_050219_2,2463,LGRKREAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2466 10.521 149.0 592900.0 25 0 79298.0 19385 LERNYHRL 8 99 367.5355438156415 1099.5848020471244 3 367.5355102419853 MULTI CID FTMS 0 0 0 2465 439697.84375 0.89538160686354 1 -0.0253095626831054 1 Unmodified _LERNYHRL_ ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7 21.74664581756881 0.5868176546531598 2 {I|L}E 2 6 29.549 0.0 0.0 2.6873 0.0 0.0 0.0 854.4348899006206 854.4348899006206 11.784385976624172 0.0 0.0 0.0 0 0.4332070678992465 0.0 0.4247425010840047 0.0 + {I|L}E 2.6873 + + 32 + 1 2.285 75949.5 1.0 125 2339 2465 DOHH2_400M_050219_2,2466 DOHH2_400M_050219_2,2466,LERNYHRL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2467 10.527 328.0 189130.0 25 0 13671.0 32792 SEENEEVKE 9 99 364.8278161301077 1091.461618990523 3 364.8281432986259 MULTI CID FTMS 0 0 0 2465 100733.625 0.6781245000411801 -7 0.1031522750854492 2 Unmodified _SEENEEVKE_ ENSG00000008086|ENST00000623535|CDKL5;nc|ENSG00000008086|O76039-1|CDKL5 7.608950283845883 0.6490595679007971 2 GG{[ES]|[DT]|[{I|L}C]}EHS 7 7 40.035 0.0 0.0 3.6681 0.0 0.0 0.0 405.18927099313606 405.18927099313606 21.84787886166141 0.0 0.0 0.0 0 0.1307196863200844 1.6989700043360187 0.9247425010840048 0.0 GG{[ES]|[DT]|[{I|L}C]}EHS 3.6681 - 114 + 1 2.285 55006.3 1.0 126 2339 2465 DOHH2_400M_050219_2,2467 DOHH2_400M_050219_2,2467,SEENEEVKE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2468 10.541 800.0 103130.0 25 0 8156.4 + 26337 NSEEGSELDL 10 115 546.738383900209 1091.462214867218 2 546.7382079958916 MULTI CID FTMS 0 0 0 2465 99686.5390625 0.856752317433285 -4 0.0451879501342773 3 Unmodified _NSEEGSELDL_ REV__ENSG00000066422|ENST00000312938|ZBTB11 47.7319792270244 0.0934623409360514 2 NSEESPAS 8 -1 82.477 0.0 0.0 7.5566 0.0 0.0 0.0 287.13681970767817 287.13681970767817 62.30117873300173 0.0 0.0 0.0 0 1.0044321917401078 1.5228787452803376 1.048455006504028 0.0 NSEESPAS 7.5566 - 540 + 1 2.285 68390.5 0.5199999809265137 127 2339 2465 DOHH2_400M_050219_2,2468 DOHH2_400M_050219_2,2468,NSEEGSELDL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2472 10.566 800.0 164270.0 25 0 20610.0 + 19676 LGLLTTPP 8 142 406.2481584111351 810.4817638890702 2 406.2480651736259 MULTI CID FTMS 0 0 0 2471 99844.2109375 1.0 0 0.0 1 Unmodified _LGLLTTPP_ REV__ENSG00000196313|ENST00000434423|POM121;REV__ENSG00000272391|ENST00000615331|POM121C;REV__nc|ENSG00000196313|Q96HA1-2|POM121;REV__nc|ENSG00000196313|Q96HA1-3|POM121;REV__nc|ENSG00000205578|A6NF01|POM121B;REV__nc|ENSG00000272391|A8CG34|POM121C 2.889219685676258 0.8067950007271085 2 {M(Oxidation (M))|F} 1 -1 13.979 0.0 0.0 1.7248 0.0 0.0 645.4025993156312 0.0 645.4025993156312 0.0 2.8025138589025147 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.7248 - 70 + 1 2.285 106648.9 0.4600000083446502 128 2342 2471 DOHH2_400M_050219_2,2472 DOHH2_400M_050219_2,2472,LGLLTTPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2475 10.586 800.0 163510.0 25 0 21408.0 + 6891 EEESQPAKKTY 11 115 437.2142710631085 1308.6209837895256 3 437.2152587771416 MULTI CID FTMS 0 0 0 2474 103490.3046875 1.0 0 0.0 1 Unmodified _EEESQPAKKTY_ ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A 23.80106514851385 0.5333463718001408 2 EEE{[QS]|[NT]}PAKKTY 11 0 + 34.315 0.0 0.0 2.6222 2.6222 80.056 0.0 0.0 0.0 21.550618802055844 8.749486474676871 8.749486474676871 21.227606675081965 0 0.0 0.958607314841775 0.5 0.0 + + EEE{[QS]|[NT]}PAKKTY;[DP]VVKAP{[QS]|[NT]}E[HC];[DP]VVKAPYYEE;[PA]K{[QN]|[E{I|L}]|[KN]}AP{[QS]|[NT]}E[HC];[PA]K{[QN]|[E{I|L}]|[KN]}APYYEE 2.6222;1.0001;0.86375;0.44002;0.30369 +;-;-;-;- + 124 + 1 2.285 108780.9 0.4600000083446502 129 2344 2474 DOHH2_400M_050219_2,2475 DOHH2_400M_050219_2,2475,EEESQPAKKTY False True EEESQPAKKTY 10.585817 437.215258777142 633063.0625 2474.0 nc|ENSG00000196504|O75400-3|PRPF40A;;ENSG00000196504|ENST00000545856|PRPF40A;;nc|ENSG00000196504|O75400|PRPF40A;;nc|ENSG00000196504|O75400-2|PRPF40A 6.554798603057861 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2478 10.606 800.0 126500.0 25 0 6459.7 -1 STDKQMGY 8 141 473.2026124072849 944.3906718813698 2 473.2031127810478 MULTI CID FTMS 0 0 0 2477 100793.4296875 0.4630520169257004 -67 0.6822595596313477 1 Oxidation (M) _STDKQM(Oxidation (M))GY_ ENSG00000084623|ENST00000677711|EIF3I 36.04419817259434 0.3004715606373109 2 DSTQQP 6 -1 37.389 0.0 0.0 3.959 0.0 0.0 270.0996085042198 0.0 270.0996085042198 0.0 21.19070971708595 0.0 0.0 0 0.3054621874040891 0.0 0.6989700043360187 0.0 DSTQQP 3.959 - 608 + 1 2.285 79192.0 0.5400000214576721 130 2346 2477 DOHH2_400M_050219_2,2478 DOHH2_400M_050219_2,2478,STDKQMGY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2482 10.619 15.0 3363200.0 25 0 550800.0 + 35993 SVQHVDAAEK 10 74 361.85250802122914 1082.5356946638874 3 361.8524352908134 MULTI CID FTMS 0 0 0 2481 2993532.75 0.0649161286721395 25 -0.2206258773803711 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 2 [VS]QHVDAAEK 10 0 [VS]Q + + 41.419 21.461 6.8312 3.8261 3.8261 51.155 0.0 0.0 0.0 0.0 12.972287753157516 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3252574989159953 + + [VS]QHVDAAEK 3.8261 + + 313 + 1 2.285 47390.2 1.0 131 2349 2481 DOHH2_400M_050219_2,2482 DOHH2_400M_050219_2,2482,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2487 10.636 128.0 463070.0 25 0 34638.0 13163 HFRHKSQL 8 97 351.5297417316845 1051.5673957952536 3 351.5299255251884 MULTI CID FTMS 0 0 0 2486 247223.15625 0.7497466771394931 12 -0.1306304931640625 1 Unmodified _HFRHKSQL_ ENSG00000113916|ENST00000406870|BCL6;ENSG00000161940|ENST00000293805|BCL6B;nc|ENSG00000113916|P41182-2|BCL6 7.910154910731844 0.7763180056447161 2 K 1 7 14.534 0.0 0.0 1.3821 0.0 0.0 905.4619555870488 0.0 905.4619555870488 0.0 -1.17931555708239 -1.17931555708239 0.0 0 0.0 0.0 0.0 0.2059771852360797 + K 1.3821 + + 119 + 1 2.285 49636.9 1.0 132 2353 2486 DOHH2_400M_050219_2,2487 DOHH2_400M_050219_2,2487,HFRHKSQL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2490 10.645 7.5 5937100.0 25 0 1186900.0 + 42948 VVSPKSQS 8 58 416.2321119447296 830.4496709562592 2 416.2321349978447 MULTI CID FTMS 0 0 0 2489 7406782.5 0.9379699603988269 7 -0.090667724609375 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 20.453626601364224 0.6087503291685402 2 VVSPAS 6 3 61.159 0.0 0.0 7.3645 0.0 0.0 0.0 287.1359041803344 287.1359041803344 43.923268153300086 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.0 VVSPAS 7.3645 - 63 + 1 2.285 43128.0 1.0 133 2355 2489 DOHH2_400M_050219_2,2490 DOHH2_400M_050219_2,2490,VVSPKSQS False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2493 10.657 306.0 272530.0 25 0 88555.0 + -1 MGLRLFSFFY 10 70 432.8850761391121 0 432.8853027224541 PEAK CID FTMS 0 0 0 2492 289059.625 0.7573983819189439 -210 1.5176734924316406 1 Oxidation (M) _M(Oxidation (M))GLRLFSFFY_ REV__ENSG00000196187|ENST00000366835|TMEM63A 2.0860074813731053 0.3961065659209837 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.285 71321.5 1.0 134 2357 2492 DOHH2_400M_050219_2,2493 DOHH2_400M_050219_2,2493,MGLRLFSFFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2494 10.67 754.0 212710.0 25 0 22986.0 + 7787 ELHKKLHQV 9 160 377.892511524574 0 377.8925048708916 PEAK CID FTMS 0 0 0 2492 82371.9453125 0.4490543741366435 -6 0.0258684158325195 2 Unmodified _ELHKKLHQV_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;ENST00000468927.1_1_2:111423713-111425408:-|nuORF;ENST00000477481.1_1_2:111419560-111423971:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 20.41453444215458 0.197313647343139 2 H 1 8 6.9897 0.0 0.0 0.9273 0.0 0.0 110.3788369384676 503.30927454166255 613.6881114801301 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 0.9273 + + 25 + 1 2.285 129141.4 1.0 135 2357 2492 DOHH2_400M_050219_2,2494 DOHH2_400M_050219_2,2494,ELHKKLHQV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2496 10.675 54.0 923370.0 25 0 76483.0 + 35996 SVQHVDAAEK 10 84 542.2750263710653 1082.5354998089306 2 542.2751953005791 MULTI CID FTMS 0 0 0 2495 1090306.75 0.0390615774746464 34 -0.2965345382690429 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 62.89396527753397 0.0289947886078699 2 [VS]QHVDAAEK 10 0 + 105.29 0.0 0.0 9.7261 9.7261 92.742 0.0 0.0 0.0 68.69911285071794 17.201140738196017 17.201140738196017 9.164539485499247 0 2.841129063296272 2.0 0.5 0.805462187404089 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVD[DV]GK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]QHVD[DV]GK;[VS]AG{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T]GK;[VS][KC]D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS][KC][TA]{M(Oxidation (M))|F}AEK;[VS][KC][{M(Oxidation (M))|F}T]AAEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AWVHGA[PA] 9.7261;8.8795;6.4818;5.5885;5.5739;5.4527;5.3104;5.1255;5.0112;4.7974 +;-;-;-;-;-;-;-;-;- + 672 + 1 2.291 43679.2 1.0 136 2358 2495 DOHH2_400M_050219_2,2496 DOHH2_400M_050219_2,2496,SVQHVDAAEK True True SVQHVDAAEK 10.675025 542.275195300579 1537582000.0 2495.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 11.201173146565756 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2498 10.691 800.0 80844.0 25 0 5498.7 -1 MNCPYFLQCCK 11 96 493.8656343020441 1478.5750735063325 3 493.8655273318291 MULTI CID FTMS 0 0 0 2497 88870.5625 0.7598662125143844 -2 0.0264482498168945 1 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))NC(Carbamidomethyl (C))PYFLQC(Carbamidomethyl (C))CK_ ENST00000456517.2_1_11:33308393-33308447:+|nuORF 2.6312355333042263 0.8627335947654684 2 {[VA]|[{I|L}G]}{[CA]|SS}GAHSEDAVC(Carbamidomethyl (C))[CS] 15 -1 + 64.792 0.0 0.0 4.382 4.382 74.401 0.0 0.0 0.0 9.76770159281525 7.6176083419547425 7.6176083419547425 3.679767852945943 0 0.0 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}{[CA]|SS}GAHSEDAVC(Carbamidomethyl (C))[CS];{[VA]|[{I|L}G]}{[CA]|SS}QHSEDAVC(Carbamidomethyl (C))[CS];{[VA]|[{I|L}G]}{[CA]|SS}GAHSEWVC(Carbamidomethyl (C))[CS];{[VA]|[{I|L}G]}{[CA]|SS}GAHSEDAV[CG][CS];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[NV]|[RG]}HSEDAVC(Carbamidomethyl (C))[CS];{[VA]|[{I|L}G]}{[CA]|SS}QHSEWVC(Carbamidomethyl (C))[CS];{[VA]|[{I|L}G]}{[CA]|SS}QHSEDAV[CG][CS];{[VA]|[{I|L}G]}{[CA]|SS}GAHSEWV[CG][CS];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[NV]|[RG]}HSEWVC(Carbamidomethyl (C))[CS];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WY]GV{[CA]|SS}AVC(Carbamidomethyl (C))[CS] 4.382;4.1332;3.9296;3.7712;3.7214;3.6822;3.5211;3.3175;3.2722;3.115 -;-;-;-;-;-;-;-;-;- 820 1 2.291 58236.9 0.4300000071525574 137 2359 2497 DOHH2_400M_050219_2,2498 DOHH2_400M_050219_2,2498,MNCPYFLQCCK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2499 10.705 800.0 157150.0 25 0 14759.0 + -1 KTATKNMK 8 134 469.2602329631599 936.5059129931198 2 469.2604858279228 MULTI CID FTMS 0 0 0 2497 109035.609375 0.472659297188196 -14 0.0892095565795898 2 Oxidation (M) _KTATKNM(Oxidation (M))K_ REV__ENSG00000151914|ENST00000680361|DST;REV__nc|ENSG00000151914|Q03001-14|DST;REV__nc|ENSG00000151914|Q03001-8|DST;REV__nc|ENSG00000151914|Q03001|DST 32.30548876998284 0.3644845974844379 2 KTT[VP]AEK 8 -1 42.974 0.0 0.0 4.5887 0.0 0.0 63.99866460088328 0.0 63.99866460088328 0.0 17.768521317403234 0.0 0.0 0 1.2302046884880935 0.0 1.6307196863200843 0.3252574989159953 KTT[VP]AEK 4.5887 - 1006 + 1 2.291 97043.4 0.4699999988079071 138 2359 2497 DOHH2_400M_050219_2,2499 DOHH2_400M_050219_2,2499,KTATKNMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2500 10.719 800.0 109890.0 25 0 60170.0 392 AEDNIAFFSSQ 11 51 614.776917017761 0 614.7763549685478 PEAK CID FTMS 0 0 0 2497 98387.5078125 0.1464582291711053 104 -0.901386260986328 3 Unmodified _AEDNIAFFSSQ_ ENSG00000079435|ENST00000244289|LIPE;nc|ENSG00000079435|Q05469-2|LIPE 8.155526934196011 0.4672964927559179 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 68496.0 0.4399999976158142 139 2359 2497 DOHH2_400M_050219_2,2500 DOHH2_400M_050219_2,2500,AEDNIAFFSSQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2503 10.731 269.0 285010.0 25 0 25034.0 + 30439 RDSFSAEK 8 101 470.2302169692544 938.4458810053088 2 470.2300903201103 MULTI CID FTMS 0 0 0 2502 225670.0 0.1773752963811946 -17 0.1536130905151367 1 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 18.1463463914782 0.6428359029697936 2 HVDAAEK 7 -1 66.323 0.0 0.0 7.0673 0.0 0.0 170.06973231815192 0.0 170.06973231815192 0.0 38.24108564924764 0.0 0.0 0 2.5356668758921828 0.0 0.4247425010840047 0.3054621874040891 HVDAAEK 7.0673 - 283 + 1 2.291 63729.3 1.0 140 2361 2502 DOHH2_400M_050219_2,2503 DOHH2_400M_050219_2,2503,RDSFSAEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2505 10.735 27.0 2123000.0 25 0 412720.0 36965 TFEHLFIK 8 65 517.786440369765 1033.55832780633 2 517.7868530154228 MULTI CID FTMS 0 0 0 2504 1892321.875 0.9456899838880236 1 -0.0047845840454101 1 Unmodified _TFEHLFIK_ ENSG00000116678|ENST00000349533|LEPR 5.230669730166228 0.792582437072536 2 KT[RH][WP]K 7 6 16.347 0.0 0.0 1.5817 0.0 0.0 82.00808580199914 0.0 82.00808580199914 0.0 9.357799557189193 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.2134679910804404 KT[RH][WP]K 1.5817 - 27 + 1 2.291 50483.3 1.0 141 2362 2504 DOHH2_400M_050219_2,2505 DOHH2_400M_050219_2,2505,TFEHLFIK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2507 10.744 314.0 189530.0 25 0 13155.0 + 8020 ENACVKPDDY 10 87 577.2468365164551 1152.47912009971 2 577.2469970583916 MULTI CID FTMS 0 0 0 2506 263462.5 0.606941819672163 6 -0.0791645050048828 1 Unmodified _ENACVKPDDY_ REV__ENSG00000077235|ENST00000356183|GTF3C1;REV__ENST00000566779.1_1_16:27492398-27495608:-|nuORF;REV__nc|ENSG00000077235|Q12789-3|GTF3C1 12.240655878213236 0.6421556946785427 2 DEAQQ{[QG]|[NA]} 7 -1 40.846 0.0 0.0 3.5442 0.0 0.0 378.1646290509781 0.0 378.1646290509781 0.0 20.51132112525204 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 DEAQQ{[QG]|[NA]} 3.5442 - 181 1 2.291 49258.6 1.0 142 2363 2506 DOHH2_400M_050219_2,2507 DOHH2_400M_050219_2,2507,ENACVKPDDY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2508 10.758 800.0 79989.0 25 0 4679.9 + 6848 EEDSSGHTRAY 11 87 626.2647759127295 1250.514998892259 2 626.2635986208916 MULTI CID FTMS 0 0 0 2506 84841.71875 0.7420298719954159 -12 0.112680435180664 2 Unmodified _EEDSSGHTRAY_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 42.83518252547288 0.1687213420692654 2 EEDSSGHT{[QV]|[N{I|L}]|[RA]|[KV]}Y 11 0 + 91.05 0.0 0.0 7.281 7.281 95.149 0.0 0.0 0.0 68.30253275710322 6.064247967304112 6.064247967304112 22.316085869055115 0 0.7302046884880937 1.6989700043360187 0.3807196863200844 0.0 + + EEDSSGHT{[QV]|[N{I|L}]|[RA]|[KV]}Y;EED[KC]HT{[QV]|[N{I|L}]|[RA]|[KV]}Y;EED{[QC]|[C(Carbamidomethyl (C))A]}HT{[QV]|[N{I|L}]|[RA]|[KV]}Y;EE{[C(Carbamidomethyl (C))E]|[WC]}GHT{[QV]|[N{I|L}]|[RA]|[KV]}Y;EE[WC(Carbamidomethyl (C))]HT{[QV]|[N{I|L}]|[RA]|[KV]}Y;EEDS[R{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DP];[DP]{[WT]|[RM]}[YK]SD[HC];[DP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[R{M(Oxidation (M))|F}]SD[HC];[DP]{[WT]|[RM]}[YK]SC[HD];{[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[R{M(Oxidation (M))|F}]SC[HD] 7.281;5.4964;5.4964;5.4964;4.9741;2.6384;1.6046;1.1196;0.75496;0.53006 +;-;-;-;-;-;-;-;-;- + 157 + 1 2.291 54744.9 0.4199999868869781 143 2363 2506 DOHH2_400M_050219_2,2508 DOHH2_400M_050219_2,2508,EEDSSGHTRAY False True EEDSSGHTRAY 10.757512 626.263598620892 750045.5625 2506.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-2|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 10.123072942097982 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2511 10.778 800.0 66949.0 25 0 7421.5 + -1 ACLWPVGSAN 10 92 537.7567484333122 1073.4989439334242 2 537.7568237185478 MULTI CID FTMS 0 0 0 2510 67081.6484375 0.7582591017000236 1 -0.0163793563842773 1 Carbamidomethyl (C) _AC(Carbamidomethyl (C))LWPVGSAN_ REV__ENST00000530134.5_1_1:32205534-32221699:-|nuORF 29.081581746732265 0.3152867722954398 2 SAN 3 -1 43.616 0.0 0.0 4.063 0.0 0.0 783.3768869039305 0.0 783.3768869039305 0.0 28.572692626732632 0.0 0.0 0 1.5 0.0 0.0 0.6643943297944485 SAN 4.063 + + 109 + 1 2.291 46847.2 0.4399999976158142 144 2365 2510 DOHH2_400M_050219_2,2511 DOHH2_400M_050219_2,2511,ACLWPVGSAN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2515 10.802 800.0 149090.0 25 0 35896.0 -1 NILYSMMK 8 107 508.2517197296724 0 508.2514526247978 PEAK CID FTMS 0 0 0 2514 76231.578125 0.5366253944544842 -58 0.6813745498657227 1 Oxidation (M) _NILYSMM(Oxidation (M))K_ ENSG00000152127|ENST00000281923|MGAT5 16.942295170755138 0.4635191396245973 2 Q 1 -1 6.0302 0.0 0.0 0.5944 0.0 0.0 787.3618703902058 96.04602228336172 883.4078926735675 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Q 0.5944 - 41 + 1 2.291 97517.9 0.4300000071525574 145 2368 2514 DOHH2_400M_050219_2,2515 DOHH2_400M_050219_2,2515,NILYSMMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2516 10.815 719.0 101570.0 25 0 11392.0 11010 GASSHDSDE 9 99 452.6676388235352 903.3207247138704 2 452.6674682497978 MULTI CID FTMS 0 0 0 2514 105208.8671875 0.7631726232176562 -3 0.0243196487426757 2 Unmodified _GASSHDSDE_ ENSG00000268182|ENST00000598409|SMIM17 7.910154910731844 0.6385446671287552 2 VE 2 8 24.693 0.0 0.0 2.7336 0.0 0.0 657.1987287195329 0.0 657.1987287195329 0.0 6.73393743112328 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 VE 2.7336 - 31 + 1 2.291 61121.8 1.0 146 2368 2514 DOHH2_400M_050219_2,2516 DOHH2_400M_050219_2,2516,GASSHDSDE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2523 10.841 122.0 555050.0 25 0 181370.0 27674 PLIFYVPGRT 10 78 388.2253540601956 1161.6542327807867 3 388.2251769900322 MULTI CID FTMS 0 0 0 2522 154720.21875 0.1315466906344534 -38 0.3432083129882812 1 Unmodified _PLIFYVPGRT_ ENSG00000010404|ENST00000340855|IDS 10.823927491677226 0.6659270209832991 2 P{I|L} 2 8 19.024 0.0 0.0 1.6376 0.0 0.0 429.2344924140368 519.2596006687644 948.4940930828012 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + P{I|L} 1.6376 + + 53 + 1 2.291 61115.1 1.0 147 2374 2522 DOHH2_400M_050219_2,2523 DOHH2_400M_050219_2,2523,PLIFYVPGRT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2526 10.855 432.0 128940.0 25 0 6778.5 35351 STDKQMGY 8 101 473.2026124072849 944.3906718813698 2 473.2028686404228 MULTI CID FTMS 0 0 0 2525 163117.796875 0.749374488730317 -37 0.3287305831909179 1 Oxidation (M) _STDKQM(Oxidation (M))GY_ ENSG00000084623|ENST00000677711|EIF3I 44.40701690623563 0.1655546087385432 2 STQQP 5 5 35.464 0.0 0.0 3.7552 0.0 0.0 385.1317129964073 0.0 385.1317129964073 0.0 9.260912590556812 0.0 0.0 0 0.4247425010840047 0.0 0.7059771852360797 0.0 STQQP 3.7552 - 385 + 1 2.291 52383.6 1.0 148 2376 2525 DOHH2_400M_050219_2,2526 DOHH2_400M_050219_2,2526,STDKQMGY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2530 10.879 800.0 145260.0 25 0 30233.0 + 30576 RERHYTDRVC 10 73 667.8227016591565 1333.6308503851128 2 667.8221313357353 MULTI CID FTMS 0 0 0 2529 110777.2890625 0.0919609804298998 -29 0.244023323059082 1 Unmodified _RERHYTDRVC_ REV__ENSG00000140107|ENST00000361529|SLC25A47 8.155526934196011 0.6889124077178598 2 R 1 -1 19.292 0.0 0.0 1.4466 0.0 0.0 1159.5192456261268 0.0 1159.5192456261268 0.0 5.4794656189555 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 R 1.4466 + + 7 + 1 2.291 87427.8 0.4300000071525574 149 2379 2529 DOHH2_400M_050219_2,2530 DOHH2_400M_050219_2,2530,RERHYTDRVC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2532 10.885 156.0 445870.0 25 0 53130.0 + 35997 SVQHVDAAEK 10 105 361.85240982822967 1082.535400084889 3 361.8522827029228 MULTI CID FTMS 0 0 0 2531 293731.3125 0.5346342152628896 -38 0.3299980163574219 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 2 HVDAAEK 7 3 29.501 0.0 0.0 2.7251 0.0 0.0 314.1567512585203 0.0 314.1567512585203 0.0 3.030097250275361 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.3494850021680094 + HVDAAEK 2.7251 + + 621 + 1 2.291 65144.7 1.0 150 2380 2531 DOHH2_400M_050219_2,2532 DOHH2_400M_050219_2,2532,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2533 10.886 31.0 1755700.0 25 0 405290.0 + 28186 PQDESISFQQR 11 63 445.5507533003391 1333.6304305012172 3 445.5508300662041 MULTI CID FTMS 0 0 0 2531 982557.5625 0.134415529850367 -36 0.3098039627075195 2 Unmodified _PQDESISFQQR_ REV__ENSG00000169184|ENST00000302326|MN1 4.897010918128616 0.8520435188433833 2 {M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 6 -1 36.191 0.0 0.0 2.7137 0.0 0.0 522.265819760786 0.0 522.265819760786 0.0 29.01863755803668 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 2.7137 - 125 + 1 2.291 47906.0 1.0 151 2380 2531 DOHH2_400M_050219_2,2533 DOHH2_400M_050219_2,2533,PQDESISFQQR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2534 10.9 800.0 91170.0 25 0 10470.0 -1 VRLKEDMKK 9 87 581.8340765429574 1161.6536001527147 2 581.8343383669853 MULTI CID FTMS 0 0 0 2531 81964.3671875 0.4477571510538219 -21 0.2042398452758789 3 Oxidation (M) _VRLKEDM(Oxidation (M))KK_ ENSG00000138640|ENST00000264344|FAM13A 13.90604991867851 0.4602628045680013 2 T{M(Oxidation (M))|F}KK 4 -1 27.875 0.0 0.0 2.3996 0.0 0.0 639.3706108078048 0.0 639.3706108078048 0.0 10.390821784153342 0.0 0.0 0 0.7429928190999391 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}KK 2.3996 - 80 1 2.291 59157.6 0.4000000059604645 152 2380 2531 DOHH2_400M_050219_2,2534 DOHH2_400M_050219_2,2534,VRLKEDMKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2536 10.905 66.0 806770.0 25 0 119610.0 42823 VVLDNSGK 8 86 416.2321119447296 830.4496709562592 2 416.2320129275322 MULTI CID FTMS 0 0 0 2535 783040.125 0.099161561047181 33 -0.1616010665893554 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 28.486842064014134 0.4448922141344407 2 VVSPASSGK 9 4 + 60.388 0.0 0.0 7.2718 7.2718 93.963 0.0 0.0 0.0 49.27910304704358 8.974701250162653 8.974701250162653 15.563317301734678 0 0.805462187404089 2.0 0.6382104921644451 0.3054621874040891 VVSPASSGK;VVSE{[NV]|[RG]}GK 7.2718;5.3977 -;- 121 + 1 2.291 48761.3 1.0 153 2381 2535 DOHH2_400M_050219_2,2536 DOHH2_400M_050219_2,2536,VVLDNSGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2537 10.919 800.0 151340.0 25 0 32536.0 + 5290 DLATCPQM 8 108 439.69265559413645 877.3707582550729 2 439.6926147341728 MULTI CID FTMS 0 0 0 2535 106936.7734375 0.2321097734750582 -53 0.5127716064453125 2 Unmodified _DLATCPQM_ REV__ENSG00000086712|ENST00000380122|TXLNG;REV__nc|ENSG00000086712|Q9NUQ3-2|TXLNG 11.640296217721598 0.738950129755968 2 GM 2 -1 15.573 0.0 0.0 1.775 0.0 0.0 671.3014721576492 0.0 671.3014721576492 0.0 0.9285416001727764 0.0 0.0 0 0.0 0.0 0.0 0.0 GM 1.775 - 158 1 2.291 97094.6 0.9200000166893004 154 2381 2535 DOHH2_400M_050219_2,2537 DOHH2_400M_050219_2,2537,DLATCPQM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2540 10.933 445.0 160850.0 25 0 12544.0 + 35999 SVQHVDAAEK 10 96 542.2750983870591 1082.535643840918 2 542.2756835818291 MULTI CID FTMS 0 0 0 2539 202020.828125 0.6932158812424013 -40 0.3572626113891601 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 2 [VS]QHVDAAEK 10 0 + 96.978 0.0 0.0 8.9584 8.9584 82.774 0.0 0.0 0.0 0.6807265078679308 0.6807265078679308 0.6807265078679308 0.6807265078679308 0 3.2034021960761265 2.0 0.8807196863200843 0.805462187404089 + + [VS]QHVDAAEK;[VS]AGHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]QHVDAAA[VS];[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{M(Oxidation (M))|F}AEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]QHVD[DV]GK;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CT]|[{M(Oxidation (M))|F}G]}AAEK 8.9584;8.8955;8.1118;7.5379;7.2943;6.6267;6.5086;6.489;6.3864;6.213 +;-;-;-;-;-;-;-;-;- + 1528 + 1 2.291 59653.3 1.0 155 2383 2539 DOHH2_400M_050219_2,2540 DOHH2_400M_050219_2,2540,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2547 10.958 81.0 775740.0 25 0 171270.0 6002 DRWGSGGQ 8 66 431.6952105317559 861.3758681303118 2 431.6953307986259 MULTI CID FTMS 0 0 0 2546 689977.625 0.2305353756311528 -43 0.3637857437133789 1 Unmodified _DRWGSGGQ_ ENST00000577783.2_1_17:77079170-77080166:+|nuORF 4.3292370932331545 0.7980541185046766 2 DD 2 7 25.217 0.0 0.0 2.9275 0.0 0.0 0.0 628.2977133821871 628.2977133821871 8.957465275951613 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DD 2.9275 - 5 + 1 2.291 55931.2 1.0 156 2389 2546 DOHH2_400M_050219_2,2547 DOHH2_400M_050219_2,2547,DRWGSGGQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2553 10.979 85.0 629110.0 25 0 56345.0 31809 RSYAADEK 8 81 470.2302169692544 938.4458810053088 2 470.2302123904228 MULTI CID FTMS 0 0 0 2552 559139.75 0.4394805639861614 16 -0.0672788619995117 1 Unmodified _RSYAADEK_ ENSG00000185760|ENST00000370398|KCNQ5;nc|ENSG00000185760|Q9NR82-2|KCNQ5;nc|ENSG00000185760|Q9NR82-3|KCNQ5;nc|ENSG00000185760|Q9NR82-4|KCNQ5;nc|ENSG00000185760|Q9NR82-5|KCNQ5;nc|ENSG00000185760|Q9NR82-6|KCNQ5;nc|ENSG00000185760|Q9NR82-7|KCNQ5 18.1463463914782 0.6428359029697936 2 HVDAAEK 7 4 56.38 0.0 0.0 6.0078 0.0 0.0 170.0698831631001 0.0 170.0698831631001 0.0 32.911684343821136 0.0 0.0 0 2.397940008672037 0.0 0.3807196863200844 0.2887254899964357 HVDAAEK 6.0078 - 126 + 1 2.291 46483.6 1.0 157 2394 2552 DOHH2_400M_050219_2,2553 DOHH2_400M_050219_2,2553,RSYAADEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2556 10.99 218.0 333520.0 25 0 60230.0 -1 VEKLRDMK 8 78 517.786440369765 1033.55832780633 2 517.7866699099541 MULTI CID FTMS 0 0 0 2555 275701.03125 0.1377819002386811 35 -0.2516813278198242 1 Oxidation (M) _VEKLRDM(Oxidation (M))K_ ENSG00000111249|ENST00000261726|CUX2 15.847184025352805 0.6768015514314958 2 {M(Oxidation (M))|F}K 2 -1 20.119 0.0 0.0 1.9466 0.0 0.0 740.4171362553519 0.0 740.4171362553519 0.0 2.742275032520144 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.25 {M(Oxidation (M))|F}K 1.9466 + + 68 + 1 2.291 61628.2 1.0 158 2396 2555 DOHH2_400M_050219_2,2556 DOHH2_400M_050219_2,2556,VEKLRDMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2574 11.062 310.0 212650.0 25 0 29692.0 + 7924 ELQRRHEQM 9 95 409.5398668894454 1225.5977712685362 3 409.5397216677666 MULTI CID FTMS 0 0 0 2573 144200.375 0.6230791037941036 -12 0.0477018356323242 1 Unmodified _ELQRRHEQM_ ENSG00000122545|ENST00000350320|SEPTIN7;nc|ENSG00000122545|Q16181-2|SEPTIN7 32.78568957990786 0.1150597335874693 2 [VP][DP]KKH{M(Oxidation (M))|F}QM 10 7 + 34.939 0.0 0.0 2.8508 2.8508 65.471 0.0 0.0 0.0 0.4271928637859901 14.277034080690356 0.4271928637859901 0.4271928637859901 0 0.0 0.0 0.8807196863200843 0.4247425010840047 [VP][DP]KKH{M(Oxidation (M))|F}QM;[DP][VP]KKH{M(Oxidation (M))|F}QM;[VP]N[HT][RP]{M(Oxidation (M))|F}QM;[YN]{M(Oxidation (M))|F}HKK{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F};[YN]{M(Oxidation (M))|F}HKK[YV]Q;[YN]{M(Oxidation (M))|F}[RP]{[ES]|[DT]|[{I|L}C]}[WK] 2.8508;2.8159;2.5261;1.0065;0.47403;0.19528 -;-;-;-;-;- 179 1 2.297 58507.6 1.0 159 2413 2573 DOHH2_400M_050219_2,2574 DOHH2_400M_050219_2,2574,ELQRRHEQM True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2583 11.094 39.0 1304000.0 25 0 199350.0 36096 SVRSPTPYKK 10 68 388.2253540601956 1161.6542327807867 3 388.2254821658134 MULTI CID FTMS 0 0 0 2582 1039082.75 0.8834520669771682 9 -0.1265525817871093 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 10.799506525563784 0.666336781075408 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 27.912 18.5 4.31 2.4028 2.4028 47.941 0.0 0.0 0.0 0.0 14.640785525501414 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 2.4028 - 92 + 1 2.297 49008.4 1.0 160 2421 2582 DOHH2_400M_050219_2,2583 DOHH2_400M_050219_2,2583,SVRSPTPYKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2586 11.109 489.0 136130.0 25 0 6774.4 -1 STDKQMGY 8 117 473.2026124072849 944.3906718813698 2 473.2030822634697 MULTI CID FTMS 0 0 0 2585 156352.171875 0.7182927375514356 10 -0.1672306060791015 1 Oxidation (M) _STDKQM(Oxidation (M))GY_ ENSG00000084623|ENST00000677711|EIF3I 38.15118350030904 0.2652218139009398 2 AATQTS 6 -1 35.169 0.0 0.0 3.724 0.0 0.0 0.0 382.1067723054511 382.1067723054511 16.496746844687916 0.0 0.0 0.0 0 0.4247425010840047 0.6020599913279624 1.329689690656103 0.0 AATQTS 3.724 - 486 1 2.297 57185.0 1.0 161 2423 2585 DOHH2_400M_050219_2,2586 DOHH2_400M_050219_2,2586,STDKQMGY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2590 11.122 60.0 978920.0 25 0 243600.0 -1 CCKYSYKGLR 10 35 667.8227016591565 1333.6308503851128 2 667.8226196169853 MULTI CID FTMS 0 0 0 2589 872524.25 0.7243198146290896 18 -0.3067474365234375 1 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))KYSYKGLR_ ENSG00000080007|ENST00000370336|DDX43 3.5964929083625545 0.7100006075494749 2 R 1 -1 17.985 0.0 0.0 1.3485 0.0 0.0 1159.5191540733924 0.0 1159.5191540733924 0.0 6.747425010840047 0.0 0.0 0 0.0 0.0 0.0 0.25 R 1.3485 + + 3 + 1 2.297 47598.4 1.0 162 2426 2589 DOHH2_400M_050219_2,2590 DOHH2_400M_050219_2,2590,CCKYSYKGLR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2591 11.136 800.0 100510.0 25 0 7869.5 + 28865 QAKKHPSL 8 124 454.7694311415468 907.5243093498937 2 454.7696411013603 MULTI CID FTMS 0 0 0 2589 74163.921875 0.7813060024134689 1 -0.0186033248901367 2 Unmodified _QAKKHPSL_ ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF 32.30548876998284 0.3644845974844379 2 [QA]KKHPTV 8 2 + 34.907 0.0 0.0 3.8464 3.8464 72.768 0.0 0.0 0.0 13.603087050896026 3.873409493950668 3.873409493950668 3.873409493950668 0 0.2614393726401688 1.0969100130080565 0.7658715643802767 0.0 [QA]KKHPTV;[QA]KKH{I|L}SP 3.8464;3.4196 -;- 152 + 1 2.297 67164.2 0.4600000083446502 163 2426 2589 DOHH2_400M_050219_2,2591 DOHH2_400M_050219_2,2591,QAKKHPSL False True QAKKHPSL 11.13581 454.76964110136 465012.15625 2589.0 ENST00000486007.1_1_7:10977674-10979684:-|nuORF;;ENSG00000189043|ENST00000339600|NDUFA4 1.9444290399551392 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2593 11.141 117.0 632680.0 25 0 98054.0 + 35998 SVQHVDAAEK 10 105 361.85240982822967 1082.535400084889 3 361.8522827029228 MULTI CID FTMS 0 0 0 2592 435709.09375 0.7930546710777934 9 -0.1938591003417968 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 2 HVDAAEK 7 3 41.209 0.0 0.0 3.8067 0.0 0.0 314.15744128891805 0.0 314.15744128891805 0.0 11.64986740233621 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.3252574989159953 + HVDAAEK 3.8067 + + 590 + 1 2.297 64728.9 1.0 164 2427 2592 DOHH2_400M_050219_2,2593 DOHH2_400M_050219_2,2593,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2594 11.151 564.0 151070.0 25 0 21019.0 -1 IRAPTTMK 8 103 467.26279026708335 932.5110276009668 2 467.2626830935478 MULTI CID FTMS 0 0 0 2592 114791.6640625 0.3149648446921749 -7 0.0505189895629882 2 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 19.256988751693697 0.6264283240490721 2 KTTA 4 -1 39.412 0.0 0.0 4.2265 0.0 0.0 63.998154062577846 464.2673739068969 528.2655279694748 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.274227503252014 0.0 KTTA 4.2265 - 218 + 1 2.297 71335.5 1.0 165 2427 2592 DOHH2_400M_050219_2,2594 DOHH2_400M_050219_2,2594,IRAPTTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2595 11.155 220.0 287900.0 25 0 31965.0 -1 FWFRCMYMLIW 11 64 413.9449474323355 1651.750683862942 4 413.9449645876884 MULTI CID FTMS 0 0 0 2592 116766.125 0.7674272924032315 -3 0.0264997482299804 3 Carbamidomethyl (C) _FWFRC(Carbamidomethyl (C))MYMLIW_ ENSG00000111684|ENST00000261407|LPCAT3;nc|ENSG00000111684|Q6P1A2-2|LPCAT3 0.0 0.8751479354844584 2 D 1 -1 19.877 0.0 0.0 1.2034 0.0 0.0 1518.7128858666513 0.0 1518.7128858666513 0.0 7.314061000121921 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 D 1.2034 - 17 + 1 2.297 56541.8 1.0 166 2427 2592 DOHH2_400M_050219_2,2595 DOHH2_400M_050219_2,2595,FWFRCMYMLIW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2597 11.16 10.0 4241400.0 25 0 385590.0 + 28187 PQDESISFQQR 11 69 445.5507533003391 1333.6304305012172 3 445.5510436892509 MULTI CID FTMS 0 0 0 2596 3690627.5 0.5048840595462165 12 -0.2156410217285156 1 Unmodified _PQDESISFQQR_ REV__ENSG00000169184|ENST00000302326|MN1 10.799506525563784 0.8105043987015127 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F} + + 34.954 12.218 1.8256 2.6209 2.6209 48.271 0.0 0.0 0.0 0.0 17.53083433768431 0.0 0.0 0 0.4247425010840047 0.0 0.3054621874040891 0.3494850021680094 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 2.6209 - 165 + 1 2.297 40522.9 1.0 167 2428 2596 DOHH2_400M_050219_2,2597 DOHH2_400M_050219_2,2597,PQDESISFQQR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2598 11.162 144.0 413090.0 25 0 47939.0 + 42949 VVSPKSQS 8 83 416.2321119447296 830.4496709562592 2 416.2319518923759 MULTI CID FTMS 0 0 0 2596 376219.59375 0.0476431807537146 80 -0.9483051300048828 2 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 20.453626601364224 0.6087503291685402 2 VVSPAS[SG]K 9 3 + 55.78 0.0 0.0 6.7168 6.7168 81.489 0.0 0.0 0.0 17.887050800742585 2.530834337684311 2.530834337684311 2.530834337684311 0 0.805462187404089 2.0 0.7302046884880937 0.0 VVSPAS[SG]K;VVSE{I|L}{[RE]|[WV]};VVSN{[QS]|[NT]}VV;VVSGG{[QS]|[NT]}VV 6.7168;6.412;3.5936;2.4783 -;-;-;- 144 + 1 2.297 51983.1 1.0 168 2428 2596 DOHH2_400M_050219_2,2598 DOHH2_400M_050219_2,2598,VVSPKSQS False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2599 11.176 800.0 119300.0 25 0 15149.0 -1 VRLKEDMKK 9 94 581.8340765429574 1161.6536001527147 2 581.8341552615166 MULTI CID FTMS 0 0 0 2596 93549.3984375 0.5110441715648592 27 -0.389474868774414 3 Oxidation (M) _VRLKEDM(Oxidation (M))KK_ ENSG00000138640|ENST00000264344|FAM13A 21.53697664764585 0.2571576504437394 2 T{M(Oxidation (M))|F}KK 4 -1 43.998 0.0 0.0 3.7875 0.0 0.0 639.3694935529312 0.0 639.3694935529312 0.0 23.375371849193627 0.0 0.0 0 0.8252574989159953 0.0 0.3807196863200844 0.0 T{M(Oxidation (M))|F}KK 3.7875 - 207 1 2.297 80588.8 0.4399999976158142 169 2428 2596 DOHH2_400M_050219_2,2599 DOHH2_400M_050219_2,2599,VRLKEDMKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2600 11.19 800.0 105720.0 25 0 9783.6 + 7189 EEQENGKAY 9 108 534.2357220942883 1066.4568912553766 2 534.2364990115166 MULTI CID FTMS 0 0 0 2596 86456.71875 0.3173842112019522 -17 0.1093320846557617 4 Unmodified _EEQENGKAY_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 74.92900055777586 0.0191935851694334 2 EEQENGKAY 9 0 + 66.691 0.0 0.0 6.2535 6.2535 88.256 0.0 0.0 0.0 40.30394370788876 16.478174818886373 16.478174818886373 9.208187539523747 0 0.5114393726401688 1.3010299956639813 0.9247425010840048 0.4247425010840047 + + EEQENGKAY;EEQEGGGKAY;EE[AG]ENGKAY;EEQEN[KQ]Y;EEQE[W{I|L}]AY;EEQEN[KA]GY;EE[AG]EGGGKAY;EEQ[QA][QT]AY;EE[AG]EN[KQ]Y;EEQEGG[KQ]Y 6.2535;5.3901;5.3901;5.1821;4.8998;4.745;4.5308;4.4086;4.3136;4.3136 +;-;-;-;-;-;-;-;-;- + 585 + 1 2.297 67805.4 0.4300000071525574 170 2428 2596 DOHH2_400M_050219_2,2600 DOHH2_400M_050219_2,2600,EEQENGKAY True True EEQENGKAY 11.190134 534.236499011517 5566137.5 2596.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 6.473097801208496 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2601 11.204 800.0 140070.0 25 0 31257.0 -1 QWRLWLCMCQR 11 70 551.5909896473969 1651.7511395423903 3 551.5915405154228 MULTI CID FTMS 0 0 0 2596 85443.296875 0.8924966978393677 -1 0.0189933776855468 5 2 Carbamidomethyl (C),Oxidation (M) _QWRLWLC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))QR_ ENST00000256646.6_1_1:120512240-120512300:-|nuORF 0.0833504608790944 0.8747546825782322 2 D 1 -1 15.485 0.0 0.0 0.93746 0.0 0.0 1518.7134178400452 0.0 1518.7134178400452 0.0 3.0102999566398125 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 D 0.93746 - 25 + 1 2.297 90077.0 0.4199999868869781 171 2428 2596 DOHH2_400M_050219_2,2601 DOHH2_400M_050219_2,2601,QWRLWLCMCQR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2603 11.21 119.0 484110.0 25 0 144970.0 + -1 DAAGMPLGM 9 61 439.69265559413645 877.3707582550729 2 439.6928588747978 MULTI CID FTMS 0 0 0 2602 424343.15625 0.9210507359327093 -5 0.0946512222290039 1 Oxidation (M) _DAAGM(Oxidation (M))PLGM_ REV__chr19:54667449-54667635|30|13.73|0.58|4.57|+|0|TE_info:L2a,L2a_dup159786,L2,LINE,donor,-,54667055,54667449|None,LILRB4|3;REV__chr19:54667449-54667638|38|37.61|0.94|5.32|+|0|TE_info:L2a,L2a_dup159786,L2,LINE,donor,-,54667055,54667449|None,LILRB4|3 4.3292370932331545 0.7635526921153418 2 GM 2 -1 15.573 0.0 0.0 1.775 0.0 0.0 671.2970448224625 0.0 671.2970448224625 0.0 8.58349385648225 0.0 0.0 0 0.0 0.0 0.0 0.0 GM 1.775 + + 5 1 2.297 51003.2 1.0 172 2429 2602 DOHH2_400M_050219_2,2603 DOHH2_400M_050219_2,2603,DAAGMPLGM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2604 11.216 304.0 221670.0 25 0 16063.0 + 36000 SVQHVDAAEK 10 96 542.2750983870591 1082.535643840918 2 542.2750121951103 MULTI CID FTMS 0 0 0 2602 246470.90625 0.8457422339195108 6 -0.0954933166503906 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 74.30644344067612 0.018797905238503 2 [VS]QHVDAAEK 10 0 + 95.799 0.0 0.0 8.8495 8.8495 92.204 0.0 0.0 0.0 69.11622501717439 18.081597033474424 18.081597033474424 9.164539485499247 0 2.734636880228201 2.0 1.055462187404089 0.805462187404089 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAA[VS];[VS]QHVDAAA[VS];[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]AGHVD[DV]GK;[VS]A[RH]WAAW;[VS]QHVD[DV]GK;[VS]QH[WR][RD];[VS]AGHV{[CP]|[EA]}EGK 8.8495;8.0029;6.8191;6.464;6.0516;5.3418;5.119;4.9901;4.8075;4.7445 +;-;-;-;-;-;-;-;-;- + 1296 + 1 2.297 55297.2 1.0 173 2429 2602 DOHH2_400M_050219_2,2604 DOHH2_400M_050219_2,2604,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2606 11.221 22.0 3004600.0 25 0 757570.0 6003 DRWGSGGQ 8 61 431.6952105317559 861.3758681303118 2 431.6953613162041 MULTI CID FTMS 0 0 0 2605 2776911.75 0.9278219614452164 -2 0.0610618591308593 1 Unmodified _DRWGSGGQ_ ENST00000577783.2_1_17:77079170-77080166:+|nuORF 4.3292370932331545 0.7980541185046766 2 DD 2 7 25.217 0.0 0.0 2.9275 0.0 0.0 0.0 628.2989579853148 628.2989579853148 13.762874945799766 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DD 2.9275 - 7 + 1 2.297 57775.9 1.0 174 2430 2605 DOHH2_400M_050219_2,2606 DOHH2_400M_050219_2,2606,DRWGSGGQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2607 11.235 792.0 130290.0 25 0 30412.0 -1 0 82 399.6060831995349 1992.9940336646744 5 399.8071472048759 MULTI CID FTMS 0 0 0 2605 68949.78125 0.9207049524352398 -2 0.0610618591308593 2 2 S{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 0.82557 0.0 0.0 1740.916440746509 0.0 1740.916440746509 0.0 2.4742501084004687 0.0 0.0 0 0.0 0.0 0.0 0.0 S{M(Oxidation (M))|F} 0.82557 - 33 + 1 2.297 90373.8 1.0 175 2430 2605 DOHH2_400M_050219_2,2607 DOHH2_400M_050219_2,2607, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2609 11.24 157.0 350900.0 25 0 26602.0 9799 FPANYAEK 8 94 470.2302699541415 938.445986975083 2 470.2303649783134 MULTI CID FTMS 0 0 0 2608 335597.71875 0.8852862612929544 -1 0.0188188552856445 1 Unmodified _FPANYAEK_ CON__ENSEMBL:ENSBTAP00000001528;ENSG00000205726|ENST00000381318|ITSN1;nc|ENSG00000205726|Q15811-10|ITSN1;nc|ENSG00000205726|Q15811-11|ITSN1;nc|ENSG00000205726|Q15811-12|ITSN1;nc|ENSG00000205726|Q15811-13|ITSN1;nc|ENSG00000205726|Q15811-2|ITSN1;nc|ENSG00000205726|Q15811-3|ITSN1;nc|ENSG00000205726|Q15811-4|ITSN1;nc|ENSG00000205726|Q15811-5|ITSN1;nc|ENSG00000205726|Q15811-6|ITSN1;nc|ENSG00000205726|Q15811-7|ITSN1;nc|ENSG00000205726|Q15811-8|ITSN1;nc|ENSG00000205726|Q15811-9|ITSN1 15.847184025352805 0.6768015514314958 2 HVDAAEK 7 5 64.659 0.0 0.0 6.89 0.0 0.0 170.0700090496661 0.0 170.0700090496661 0.0 28.496075289514096 0.0 0.0 0 2.1989700043360187 0.0 0.3252574989159953 0.2742275032520141 HVDAAEK 6.89 - 292 + 1 2.297 49406.9 1.0 176 2431 2608 DOHH2_400M_050219_2,2609 DOHH2_400M_050219_2,2609,FPANYAEK False False False False contaminant PXD020620_cell_line DOHH2_400M_050219_2 2610 11.247 400.0 234660.0 25 0 30133.0 35638 SVAQVFLNNY 10 123 385.531957388766 1153.574042766498 3 385.5316955447197 MULTI CID FTMS 0 0 0 2608 99077.9296875 0.4487310496385553 -4 0.0988740921020507 2 Unmodified _SVAQVFLNNY_ ENSG00000196415|ENST00000234347|PRTN3 19.256988751693697 0.5244284437930726 2 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 8 5 41.609 0.0 0.0 3.6069 0.0 0.0 0.0 311.1388347488509 311.1388347488509 25.71743064595009 0.0 0.0 0.0 0 0.0 2.0 0.5941876774005248 0.2302046884880938 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 3.6069 - 393 1 2.297 78257.3 1.0 177 2431 2608 DOHH2_400M_050219_2,2610 DOHH2_400M_050219_2,2610,SVAQVFLNNY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2611 11.261 800.0 120670.0 25 0 13495.0 -1 0 64 499.2560867119764 1992.9952409815053 4 499.2557556033134 MULTI CID FTMS 0 0 0 2608 81765.0390625 1.0 0 0.0 3 2 Y 1 -1 11.109 0.0 0.0 0.55741 0.0 0.0 1811.921310172715 0.0 1811.921310172715 0.0 5.858632268266155 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.55741 - 32 + 1 2.297 85376.3 0.4300000071525574 178 2431 2608 DOHH2_400M_050219_2,2611 DOHH2_400M_050219_2,2611, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2614 11.282 800.0 92294.0 25 0 10293.0 + 19201 LEGEESRMSGE 11 80 620.2613600514405 1238.508167169681 2 620.2617675662041 MULTI CID FTMS 0 0 0 2613 106835.234375 0.6373520692615867 -2 0.0306692123413085 1 Oxidation (M) _LEGEESRM(Oxidation (M))SGE_ CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__Q7Z794;ENSG00000167768|ENST00000252244|KRT1;ENSG00000189182|ENST00000341809|KRT77 68.75988807550267 0.0359983986270074 2 {I|L}EGEES[R{M(Oxidation (M))|F}]SGE 11 0 + 83.755 0.0 0.0 6.7626 6.7626 92.538 0.0 0.0 0.0 61.84409040995942 8.472037248313 8.472037248313 15.00416238606644 0 1.2302046884880935 2.0 1.8556270500406933 0.0 + + {I|L}EGEES[R{M(Oxidation (M))|F}]SGE;{I|L}EGEE[YK][C(Carbamidomethyl (C))D]P;{[QN]|[E{I|L}]|[KN]}GT[WC(Carbamidomethyl (C))][EC]E{I|L};{[QN]|[E{I|L}]|[KN]}GT[WC(Carbamidomethyl (C))]{[DA]|[EG]}[C(Carbamidomethyl (C))K];{[DA]|[EG]}{I|L}T[WC(Carbamidomethyl (C))]{[DA]|[EG]}[C(Carbamidomethyl (C))K];{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H]S[R{M(Oxidation (M))|F}]SGE;[TP]TT[WC(Carbamidomethyl (C))]{[DA]|[EG]}[C(Carbamidomethyl (C))K];{[VA]|[{I|L}G]}ET[WC(Carbamidomethyl (C))]{[DA]|[EG]}[C(Carbamidomethyl (C))K];[VP]CT[WC(Carbamidomethyl (C))]W[C(Carbamidomethyl (C))K] 6.7626;5.5511;3.9508;3.4503;2.3174;1.9844;1.6784;0.90436;0.43313 +;-;-;-;-;-;-;-;- + 444 + 1 2.297 62137.4 0.4600000083446502 179 2433 2613 DOHH2_400M_050219_2,2614 DOHH2_400M_050219_2,2614,LEGEESRMSGE True False LEGEESRMSGE 11.281736 620.261767566204 836850.375 2613.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253 8.709958871205648 2.0 True 11.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 2615 11.296 800.0 89858.0 25 0 12697.0 -1 RYRCWERRFQS 11 88 548.6045043605494 1642.791683681848 3 548.6044189333916 MULTI CID FTMS 0 0 0 2613 85658.3515625 1.0 0 0.0 2 Carbamidomethyl (C) _RYRC(Carbamidomethyl (C))WERRFQS_ ENST00000328599.4_1_8:125463328-125463391:+|nuORF 0.0948413911109767 0.8747004676205551 2 QTA[KP]S[QA] 8 -1 44.887 0.0 0.0 2.7324 0.0 0.0 813.3636341779312 0.0 813.3636341779312 0.0 30.110826842212703 0.0 0.0 0 0.7134679910804405 0.0 1.3494850021680094 0.4247425010840047 QTA[KP]S[QA] 2.7324 - 356 1 2.297 60843.4 0.4300000071525574 180 2433 2613 DOHH2_400M_050219_2,2615 DOHH2_400M_050219_2,2615,RYRCWERRFQS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2618 11.316 800.0 196100.0 25 0 10106.0 + -1 YETPVCERQ 9 168 394.5146651556961 1180.5221660672885 3 394.5145751833916 MULTI CID FTMS 0 0 0 2617 106557.9609375 0.7285018181274355 -5 0.0835895538330078 1 Carbamidomethyl (C) _YETPVC(Carbamidomethyl (C))ERQ_ REV__ENSG00000122376|ENST00000298786|SHLD2;REV__ENST00000323387.5_10:47380223-47380502:+|nuORF;REV__nc|ENSG00000122376|Q86V20|SHLD2 10.150570793230772 0.5619192000662246 2 NQ 2 -1 18.756 0.0 0.0 1.5888 0.0 0.0 920.4287728472171 0.0 920.4287728472171 0.0 1.264348410275549 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 NQ 1.5888 - 201 1 2.297 125404.2 0.4300000071525574 181 2435 2617 DOHH2_400M_050219_2,2618 DOHH2_400M_050219_2,2618,YETPVCERQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2619 11.33 800.0 93459.0 25 0 4880.2 + 42274 VSQHTPEPIF 10 105 577.7937294171844 1153.5729059011687 2 577.7941161990166 MULTI CID FTMS 0 0 0 2617 85795.2421875 0.8831789094599735 1 -0.0302143096923828 2 Unmodified _VSQHTPEPIF_ REV__ENSG00000221843|ENST00000447166|C2orf16 19.361941925380144 0.5226674314761524 2 [VS]QHVDAAAEK 11 -1 + 99.232 0.0 0.0 8.6022 8.6022 91.848 0.0 0.0 0.0 68.53254547774061 15.823198202617988 15.823198202617988 9.128498242811006 0 2.353917193908117 2.0 0.5 0.7742275032520141 [VS]QHVDAAAEK;[VS][AG]HVDAAAEK;[VS]QHVD{[NV]|[RG]}EK;[VS]QHVAADAEK;[VS][AG]HVD{[NV]|[RG]}EK;[VS]QH[Q{I|L}]DAEK;[VS]AGHVD{NN|[MP]|[D{I|L}]|[EV]}GGK;[VS][AG]HVAADAEK;[VS]AGHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AEQ;[VS][AG]H[Q{I|L}]DAEK 8.6022;7.8109;7.319;6.5505;6.5245;5.8732;5.8077;5.7592;5.4513;5.0788 -;-;-;-;-;-;-;-;-;- 837 + 1 2.297 59703.1 0.4399999976158142 182 2435 2617 DOHH2_400M_050219_2,2619 DOHH2_400M_050219_2,2619,VSQHTPEPIF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2622 11.349 626.0 184330.0 25 0 26796.0 + 39989 VGAWVQMREL 10 129 396.8791103604342 1187.6155016815026 3 396.8785583376884 MULTI CID FTMS 0 0 0 2621 87342.71875 0.5490338167572599 -5 0.0724411010742187 1 Unmodified _VGAWVQMREL_ REV__ENST00000469616.1_1_3:52558942-52559071:-|nuORF 16.565877749689598 0.5695826726197942 2 [VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KEKEE{I|L} 10 -1 + 22.255 0.0 0.0 1.8739 1.8739 76.659 0.0 0.0 0.0 3.4992606043882937 1.335397290468375 1.335397290468375 10.09759837289156 0 0.3807196863200844 1.3979400086720375 0.4247425010840047 0.0 [VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KEKEE{I|L};{[QN]|[E{I|L}]|[KN]}[W{I|L}]EKEE{I|L};[AG]{[RE]|[WV]}KEKEE{I|L} 1.8739;1.0237;0.40068 -;-;- 133 1 2.297 94315.9 1.0 183 2437 2621 DOHH2_400M_050219_2,2622 DOHH2_400M_050219_2,2622,VGAWVQMREL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2623 11.362 800.0 266870.0 25 0 30507.0 + 1245 AIKKKDEL 8 141 472.79238122535503 943.57020951751 2 472.7924987673759 MULTI CID FTMS 0 0 0 2621 220716.015625 0.1607150284953573 -10 0.1979169845581054 2 Unmodified _AIKKKDEL_ ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF 75.76082778847304 0.1037447112370312 2 {I|L}AKK[C(Carbamidomethyl (C))S]K 7 5 74.652 0.0 0.0 7.9116 0.0 0.0 0.0 125.07224451236564 125.07224451236564 48.1980473438867 0.0 0.0 0.0 0 0.6643943297944485 2.0 1.1237125054200234 0.6549471895720985 {I|L}AKK[C(Carbamidomethyl (C))S]K 7.9116 - 796 + 1 2.297 168060.0 0.7300000190734863 184 2437 2621 DOHH2_400M_050219_2,2623 DOHH2_400M_050219_2,2623,AIKKKDEL True True AIKKKDEL 11.362325 472.792498767376 18221347.5 2621.0 ENST00000599232.1_1_19:58906030-58906114:+|nuORF;;ENSG00000083845|ENST00000196551|RPS5 1.2016380826632185 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2628 11.387 565.0 152290.0 25 0 18935.0 33053 SEQEQRNL 8 95 502.2441786013287 1002.4738042694572 2 502.2435180544853 MULTI CID FTMS 0 0 0 2627 100018.6328125 0.387875765692272 -31 0.3328733444213867 1 Unmodified _SEQEQRNL_ ENSG00000140835|ENST00000539698|CHST4 30.22481116460888 0.4082965392918993 2 {I|L} 1 7 11.42 0.0 0.0 1.1392 0.0 0.0 871.3792283190652 0.0 871.3792283190652 0.0 3.9727083328590655 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1392 + + 25 + 1 2.297 71432.8 1.0 185 2441 2627 DOHH2_400M_050219_2,2628 DOHH2_400M_050219_2,2628,SEQEQRNL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2631 11.398 269.0 216430.0 25 0 38108.0 -1 IRAPTTMK 8 60 467.26279026708335 932.5110276009668 2 467.2628967165947 MULTI CID FTMS 0 0 0 2630 285638.71875 0.7837342147090244 9 -0.1292810440063476 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 19.256988751693697 0.6264283240490721 2 T{M(Oxidation (M))|F}K 3 -1 33.729 0.0 0.0 3.617 0.0 0.0 538.3220455226449 0.0 538.3220455226449 0.0 14.299377089902665 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3054621874040891 T{M(Oxidation (M))|F}K 3.617 + + 107 + 1 2.297 50390.5 1.0 186 2443 2630 DOHH2_400M_050219_2,2631 DOHH2_400M_050219_2,2631,IRAPTTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2632 11.406 430.0 218000.0 25 0 20834.0 + + 8917 FAHKRSERL 9 104 381.8847517205261 1142.6324257617782 3 381.8842346072197 MULTI CID FTMS 0 0 0 2630 81875.7109375 0.5202391629861389 -1 0.003885269165039 2 Unmodified _FAIRFGAHPK_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 10.073929032068715 0.6785112666868882 2 {I|L}AE 3 -1 29.45 0.0 0.0 2.5774 0.0 0.0 811.4411833280438 0.0 811.4411833280438 0.0 8.481362441963327 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {I|L}AE 2.5774 - 70 1 2.297 78560.6 1.0 187 2443 2630 DOHH2_400M_050219_2,2632 DOHH2_400M_050219_2,2632,FAIRFGAHPK False False FAHKRSERL 11.405787 381.88423460722 540439.1875 2630.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 1.757021387418111 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 2633 11.41 230.0 410310.0 25 0 41880.0 7402 EGKALLGDIKL 11 102 386.2350295589754 1155.6832592771264 3 386.2348815798759 MULTI CID FTMS 0 0 0 2630 176806.734375 0.6108904326126362 -3 0.0202007293701171 3 Unmodified _EGKALLGDIKL_ ENST00000605862.4_1_7:128214806-128231910:+|nuORF 8.28643447893445 0.836051997600898 2 {I|L}E 2 10 24.776 0.0 0.0 2.1439 0.0 0.0 0.0 910.5326228078134 910.5326228078134 3.273692730538258 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}E 2.1439 - 41 + 1 2.297 79286.0 1.0 188 2443 2630 DOHH2_400M_050219_2,2633 DOHH2_400M_050219_2,2633,EGKALLGDIKL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2634 11.424 800.0 65415.0 25 0 6392.6 -1 LSCPWNLSQG 10 94 581.2727606823493 1160.5309684314984 2 581.2735473513603 MULTI CID FTMS 0 0 0 2630 97981.4921875 1.0 0 0.0 4 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 23.78978130925829 0.4341852049148378 2 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}P[PS]QS 9 -1 43.776 0.0 0.0 3.772 0.0 0.0 0.0 200.06829688292345 200.06829688292345 20.5045307334246 0.0 0.0 0.0 0 1.7302046884880935 1.5228787452803376 0.9247425010840048 0.0 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}P[PS]QS 3.772 - 119 1 2.297 46461.3 0.4600000083446502 189 2443 2630 DOHH2_400M_050219_2,2634 DOHH2_400M_050219_2,2634,LSCPWNLSQG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2636 11.433 256.0 258620.0 25 0 42573.0 + 42950 VVSPKSQS 8 90 416.2321119447296 830.4496709562592 2 416.2315856814384 MULTI CID FTMS 0 0 0 2635 114993.703125 0.0145624148091658 96 -0.9316234588623048 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 14.838274106304384 0.6917062315640577 2 VVSE{I|L}{[RE]|[WV]} 7 5 + 49.965 0.0 0.0 6.0167 6.0167 89.95 0.0 0.0 0.0 37.47404600917869 6.267507096020992 6.267507096020992 14.304489918032536 0 0.75 2.0 0.0 0.25 VVSE{I|L}{[RE]|[WV]};VVSPAS[SG]K 6.0167;4.2942 -;- 75 + 1 2.313 59373.9 1.0 190 2444 2635 DOHH2_400M_050219_2,2636 DOHH2_400M_050219_2,2636,VVSPKSQS False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2637 11.436 200.0 319580.0 25 0 32414.0 + 36001 SVQHVDAAEK 10 105 361.8526051208687 1082.535985962806 3 361.8521911501884 MULTI CID FTMS 0 0 0 2635 184054.625 0.1667329097400191 -20 0.3146438598632812 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 24.881564428377168 0.4096545554397951 2 [VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK 11 8 + 31.03 0.0 0.0 2.8664 2.8664 69.089 0.0 0.0 0.0 0.2436395776829059 13.309710622901214 0.2436395776829059 3.0102999566398125 0 0.7117581349478641 2.0 0.1861818737241735 0.0 [VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;[VS]AG{M(Oxidation (M))|F}AA[Y{I|L}]GK;[WK]HVDAK{[CP]|[EA]};[{I|L}T][C(Carbamidomethyl (C))S]AV[{M(Oxidation (M))|F}T]GK;[{I|L}T]{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}[Y{I|L}]GK;[WK]HVA[C(Carbamidomethyl (C))S][VP];[WK]HVADK{[CP]|[EA]};[{I|L}T][C(Carbamidomethyl (C))S]AA[Y{I|L}]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;[WK]HVA{[CT]|[{M(Oxidation (M))|F}G]}A[PA] 2.8664;2.5883;1.6703;1.6226;1.6201;1.4182;1.3923;1.3445;1.0571;1.036 -;-;-;-;-;-;-;-;-;- 295 1 2.313 57171.7 1.0 191 2444 2635 DOHH2_400M_050219_2,2637 DOHH2_400M_050219_2,2637,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2639 11.443 206.0 219330.0 25 0 13769.0 + 7190 EEQENGKAY 9 78 534.2357220942883 1066.4568912553766 2 534.2355834841728 MULTI CID FTMS 0 0 0 2638 272403.96875 1.0 0 0.0 1 Unmodified _EEQENGKAY_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 42.09456458481378 0.0639583784996157 2 EN[KQ]Y 5 5 24.309 0.0 0.0 2.2794 0.0 0.0 386.1384841282266 0.0 386.1384841282266 0.0 -3.180161563804358 -3.180161563804358 0.0 0 0.0 0.0 0.4247425010840047 0.2614393726401688 EN[KQ]Y 2.2794 - 216 + 1 2.313 44877.0 1.0 192 2445 2638 DOHH2_400M_050219_2,2639 DOHH2_400M_050219_2,2639,EEQENGKAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2640 11.455 683.0 130770.0 25 0 20119.0 + 16587 KDLQEVKH 8 115 498.7772006393556 995.5398483455112 2 498.7773010134697 MULTI CID FTMS 0 0 0 2638 122603.0859375 0.3196938889091698 -8 0.1026620864868164 2 Unmodified _KDLQEVKH_ REV__ENSG00000239900|ENST00000623063|ADSL;REV__nc|ENSG00000239900|P30566-2|ADSL 34.10243960390752 0.3329570729325616 2 [EP]{I|L}[QT]A{I|L}K 8 -1 48.083 0.0 0.0 4.8299 0.0 0.0 0.0 112.00386897638704 112.00386897638704 26.81056715068445 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 0.1989700043360188 1.174742501084005 [EP]{I|L}[QT]A{I|L}K 4.8299 - 271 1 2.313 72816.3 1.0 193 2445 2638 DOHH2_400M_050219_2,2640 DOHH2_400M_050219_2,2640,KDLQEVKH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2641 11.469 800.0 131280.0 25 0 11823.0 + + 2799 ATDPKAIGH 9 109 455.741114842288 909.467676751376 2 455.7408630251884 MULTI CID FTMS 0 0 0 2638 102425.21875 0.4968472640564151 -15 0.2205238342285156 3 Unmodified _ATVGAGGIAGH_ ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44442124-44442513:+|nuORF;nc|ENSG00000117410|Q99437-2|ATP6V0B 19.256988751693697 0.6345794173041263 2 [VS]K{[NV]|[RG]}AE 7 -1 34.951 0.0 0.0 3.8431 0.0 0.0 0.0 179.04992707780096 179.04992707780096 -11.369770130296573 0.0 -11.369770130296573 0.0 0 2.20597718523608 0.0 0.6861818737241735 0.0 [VS]K{[NV]|[RG]}AE 3.8431 - 318 1 2.313 83522.9 0.4600000083446502 194 2445 2638 DOHH2_400M_050219_2,2641 DOHH2_400M_050219_2,2641,ATVGAGGIAGH False False ATDPKAIGH 11.468533 455.740863025188 268972.6875 2638.0 ENSG00000117410|ENST00000472174|ATP6V0B;;ENST00000496131.1_1_1:44442124-44442513:+|nuORF;;nc|ENSG00000117410|Q99437-2|ATP6V0B 0.4573024710019429 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 2642 11.474 273.0 440230.0 25 0 175840.0 31823 RTATIMIQKT 10 104 388.22523043846405 1161.6538619155922 3 388.2274963259697 MULTI CID FTMS 0 0 0 2638 75393.21875 0.1293702723830219 -23 0.3422918319702148 4 Unmodified _RTATIMIQKT_ ENSG00000167306|ENST00000285039|MYO5B 7.101721422024254 0.6937868747866316 2 T 1 9 13.737 0.0 0.0 1.1825 0.0 0.0 732.4205328226085 325.16257654361567 1057.583109366224 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 + T 1.1825 + + 83 + 1 2.313 100773.6 1.0 195 2445 2638 DOHH2_400M_050219_2,2642 DOHH2_400M_050219_2,2642,RTATIMIQKT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2644 11.478 71.0 787000.0 25 0 155350.0 -1 DRCAQAAA 8 61 431.6952105317559 861.3758681303118 2 431.6953613162041 MULTI CID FTMS 0 0 0 2643 608108.125 0.2031811321725556 14 -0.0908527374267578 1 Carbamidomethyl (C) _DRC(Carbamidomethyl (C))AQAAA_ ENST00000379661.7_1_16:57770927-57771149:+|nuORF 5.230669730166228 0.792582437072536 2 DD 2 -1 23.711 0.0 0.0 2.7527 0.0 0.0 0.0 628.2980134695777 628.2980134695777 13.450528104279016 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DD 2.7527 - 5 + 1 2.313 52057.2 1.0 196 2446 2643 DOHH2_400M_050219_2,2644 DOHH2_400M_050219_2,2644,DRCAQAAA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2645 11.482 209.0 291280.0 25 0 75724.0 -1 VGPSCLDM 8 76 439.69265559413645 877.3707582550729 2 439.6927978396416 MULTI CID FTMS 0 0 0 2643 247184.578125 0.5365222326317357 12 -0.0827369689941406 2 Carbamidomethyl (C) _VGPSC(Carbamidomethyl (C))LDM_ ENSG00000110777|ENST00000393067|POU2AF1 5.230669730166228 0.792582437072536 2 Y 1 -1 12.474 0.0 0.0 1.4218 0.0 0.0 696.2964764941339 0.0 696.2964764941339 0.0 1.365006360318688 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4218 - 18 + 1 2.313 53444.6 1.0 197 2446 2643 DOHH2_400M_050219_2,2645 DOHH2_400M_050219_2,2645,VGPSCLDM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2646 11.496 800.0 137140.0 25 0 9908.7 + 36003 SVQHVDAAEK 10 111 542.2751843296418 1082.5358157260837 2 542.2755615115166 MULTI CID FTMS 0 0 0 2643 119749.625 0.2750382682640659 -15 0.2388668060302734 3 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 74.09353968926766 0.0188047629662086 2 [VS]QHVDAAEK 10 0 + 112.79 0.0 0.0 10.419 10.419 92.951 0.0 0.0 0.0 16.333620618176965 16.333620618176965 16.333620618176965 9.164539485499247 0 3.2658715643802765 2.0 0.805462187404089 0.7742275032520141 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]QHVADAEK;[VS]AGHVDAAEK;[VS][AG]HVADAEK;[VS]QHVD[DV]GK;[VS]QHVDAA[VS]A;[VS]AGHVD[DV]GK;[VS]AGHVDAAA[VS];[VS][AG]HVD[DV]GK 10.419;9.5724;9.4232;8.9102;8.5767;8.39;7.9528;7.6501;7.5526;7.5434 +;-;-;-;-;-;-;-;-;- + 3026 + 1 2.313 91203.2 0.5 198 2446 2643 DOHH2_400M_050219_2,2646 DOHH2_400M_050219_2,2646,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2652 11.52 282.0 337950.0 25 0 113970.0 -1 0 88 406.22549219240057 405.2182157258006 1 406.2240478396416 MULTI CID FTMS 0 0 0 2651 177864.296875 0.0623550803517441 -304 2.3813018798828125 1 2 EK 2 -1 18.711 0.0 0.0 4.6176 0.0 0.0 130.07015771974432 0.0 130.07015771974432 0.0 9.314244818629955 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.2742275032520141 EK 4.6176 - 25 + 1 2.327 81635.2 1.0 199 2451 2651 DOHH2_400M_050219_2,2652 DOHH2_400M_050219_2,2652, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2655 11.54 800.0 120330.0 25 0 17328.0 + 5635 DPDTLISLYE 10 85 583.2854742244638 1164.5563955157274 2 583.2880737185478 MULTI CID FTMS 0 0 0 2654 100034.6640625 0.7026118886609971 -9 0.0998620986938476 1 Unmodified _DPDTLISLYE_ REV__ENSG00000084674|ENST00000233242|APOB 19.256988751693697 0.5244284437930726 2 {M(Oxidation (M))|F} 1 -1 17.787 0.0 0.0 1.5273 0.0 0.0 999.5102204442416 0.0 999.5102204442416 0.0 5.31234684152075 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.5273 - 45 + 1 2.327 75876.9 0.4199999868869781 200 2453 2654 DOHH2_400M_050219_2,2655 DOHH2_400M_050219_2,2655,DPDTLISLYE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2669 11.605 800.0 76975.0 25 0 7218.7 -1 QCCQYDYCNSW 11 84 763.7572980518877 1525.5000431705753 2 763.7593871951103 MULTI CID FTMS 0 0 0 2668 80247.375 0.5956246597603182 -8 0.0322856903076171 1 2 Carbamidomethyl (C) _QC(Carbamidomethyl (C))CQYDYC(Carbamidomethyl (C))NSW_ ENSG00000240053|ENST00000375864|LY6G5B;nc|ENSG00000240053|Q8NDX9-2|LY6G5B 1.1933415558491238 0.8695176722560516 2 [DP][C(Carbamidomethyl (C))R]A{M(Oxidation (M))|F}DGV 9 -1 44.147 0.0 0.0 2.8939 0.0 0.0 0.0 505.0771055087191 505.0771055087191 23.91318745597054 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3054621874040891 0.0 [DP][C(Carbamidomethyl (C))R]A{M(Oxidation (M))|F}DGV 2.8939 - 1323 1 2.327 51634.5 0.4000000059604645 201 2466 2668 DOHH2_400M_050219_2,2669 DOHH2_400M_050219_2,2669,QCCQYDYCNSW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2671 11.611 185.0 392290.0 25 0 52826.0 + 18754 LALSSPTKK 9 79 472.79238122535503 943.57020951751 2 472.7923156619072 MULTI CID FTMS 0 0 0 2670 353641.625 0.2575052094796054 20 -0.1945180892944336 1 Unmodified _LALSSPTKK_ CON__Q32MB2;ENSG00000186049|ENST00000305748|KRT73 37.97399986684836 0.0865783450051559 2 {I|L}A{I|L}{M(Oxidation (M))|F}DKK 7 4 73.748 0.0 0.0 7.8159 0.0 0.0 0.0 125.07224451236564 125.07224451236564 55.649123126898274 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.2302046884880935 0.4247425010840047 {I|L}A{I|L}{M(Oxidation (M))|F}DKK 7.8159 - 219 + 1 2.327 60374.7 1.0 202 2467 2670 DOHH2_400M_050219_2,2671 DOHH2_400M_050219_2,2671,LALSSPTKK True False False False contaminant PXD020620_cell_line DOHH2_400M_050219_2 2672 11.617 337.0 345610.0 25 0 35602.0 + 42292 VSSGGAKK 8 123 367.2140304312291 732.4135079292582 2 367.2138854861259 MULTI CID FTMS 0 0 0 2670 246764.5625 0.1502436939806369 -32 0.3055143356323242 2 Unmodified _VSSGGAKK_ REV__ENSG00000103404|ENST00000219689|USP31 4.75600775471527 0.7954636275367004 2 V{I|L}TA{[CA]|SS}R 7 -1 + 67.527 0.0 0.0 9.2198 9.2198 89.107 0.0 0.0 0.0 49.98274143687247 10.003406882387225 10.003406882387225 5.98181473782688 0 0.4247425010840047 2.0 1.079689690656103 0.2059771852360797 V{I|L}TA{[CA]|SS}R;V{I|L}TS{[SA]|[TG]}R 9.2198;8.4031 -;- 90 + 1 2.327 93003.6 1.0 203 2467 2670 DOHH2_400M_050219_2,2672 DOHH2_400M_050219_2,2672,VSSGGAKK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2675 11.632 491.0 170690.0 25 0 20853.0 + 26494 NTVIDKDLSF 10 125 384.535373511902 1150.584291135906 3 384.5351135134697 MULTI CID FTMS 0 0 0 2674 61602.03125 0.7403143490700652 -4 0.0367059707641601 1 Unmodified _NTVIDKDLSF_ REV__ENSG00000188641|ENST00000370192|DPYD 17.11289562659939 0.5604042439455784 2 {M(Oxidation (M))|F} 1 -1 18.099 0.0 0.0 1.573 0.0 0.0 985.5052333739904 0.0 985.5052333739904 0.0 5.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.573 + + 41 + 1 2.327 71465.8 1.0 204 2469 2674 DOHH2_400M_050219_2,2675 DOHH2_400M_050219_2,2675,NTVIDKDLSF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2676 11.646 800.0 115450.0 25 0 13306.0 + 34848 SQGFSHSQM 9 117 512.7108457123446 1023.4071384914891 2 512.7110473513603 MULTI CID FTMS 0 0 0 2674 108167.2265625 0.016356015112048 -30 0.2548332214355469 2 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 110.79276546118962 0.005272472070827 2 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 86.335 0.0 0.0 8.436 8.436 92.999 0.0 0.0 0.0 16.758914350752363 59.37189943457126 16.758914350752363 9.208187539523747 0 1.3494850021680094 1.3010299956639813 1.0228787452803376 1.3737125054200234 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QT{[CA]|SS}S;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTGG{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}QS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QSQ{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]SWQS;{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}[AG]S;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}QS 8.436;7.5363;7.5363;7.5363;7.3075;7.2606;7.1629;7.0465;6.4077;6.4077 -;-;-;-;-;-;-;-;-;- 1251 1 2.327 73495.0 0.4900000095367431 205 2469 2674 DOHH2_400M_050219_2,2676 DOHH2_400M_050219_2,2676,SQGFSHSQM True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2678 11.653 235.0 225980.0 25 0 31927.0 + 32995 SENGNQKNL 9 82 502.2441786013287 1002.4738042694572 2 502.2444335818291 MULTI CID FTMS 0 0 0 2677 208229.875 0.8075227578549449 -2 0.0291414260864257 1 Unmodified _SENGNQKNL_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 36.04419817259434 0.0971720506436186 2 KN{I|L} 3 6 15.406 0.0 0.0 1.5368 0.0 0.0 629.2420670641824 0.0 629.2420670641824 0.0 6.371245818316444 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 + KN{I|L} 1.5368 + + 38 + 1 2.327 50152.0 1.0 206 2470 2677 DOHH2_400M_050219_2,2678 DOHH2_400M_050219_2,2678,SENGNQKNL True False SENGNQKNL 11.653261 502.244433581829 5461764.0 2677.0 nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;nc|ENSG00000072571|O75330-4|HMMR;;ENSG00000072571|ENST00000393915|HMMR 3.17893123626709 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2681 11.674 800.0 114330.0 25 0 5425.0 + 35626 SVAGWAQLPPE 11 107 577.7935656524606 1153.5725783717212 2 577.7933227419853 MULTI CID FTMS 0 0 0 2680 83813.9453125 0.2602360665249721 -5 0.0521812438964843 1 Unmodified _SVAGWAQLPPE_ REV__ENSG00000128815|ENST00000325239|WDFY4;REV__nc|ENSG00000128815|Q6ZS81-3|WDFY4;REV__nc|ENSG00000128815|Q6ZS81-4|WDFY4;REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4 29.84058131909904 0.3915366693542702 2 [VS]QHVDAAAEK 11 -1 + 105.52 0.0 0.0 9.147 9.147 91.739 0.0 0.0 0.0 8.845964570362327 8.845964570362327 8.845964570362327 8.845964570362327 0 3.499134866972623 2.0 0.8494850021680094 0.6861818737241735 [VS]QHVDAAAEK;[VS]AGHVDAAAEK;[VS][AG]HVDAAAEK;[VS]AGHVDNVEK;[VS]AGHVDA[DV]GK;[VS]QHVDNVEK;[VS]AGHVD[VG]GEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAAEK;[VS]QHVDA[DV]GK;[VS]AGHVDGGVEK 9.147;8.3802;8.3557;7.0695;6.9737;6.4441;6.4308;6.3453;6.3452;6.2781 -;-;-;-;-;-;-;-;-;- 2910 + 1 2.327 74938.9 0.4399999976158142 207 2472 2680 DOHH2_400M_050219_2,2681 DOHH2_400M_050219_2,2681,SVAGWAQLPPE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2682 11.687 800.0 118720.0 25 0 6715.4 + 33410 SHELSQDDPH 10 117 582.7493841729568 1163.4842154127134 2 582.7491332888603 MULTI CID FTMS 0 0 0 2680 84472.6953125 0.8244586673612577 1 -0.0440673828125 2 Unmodified _SHELSQDDPH_ REV__ENST00000382751.3_1_21:33687168-33687225:-|nuORF 26.268140514670165 0.3785003716575977 2 EQSEH 5 -1 49.795 0.0 0.0 4.2798 0.0 0.0 535.238573142775 0.0 535.238573142775 0.0 25.47228775315752 0.0 0.0 0 1.1307196863200843 0.0 0.4247425010840047 0.3807196863200844 EQSEH 4.2798 - 420 1 2.327 72997.2 0.4300000071525574 208 2472 2680 DOHH2_400M_050219_2,2682 DOHH2_400M_050219_2,2682,SHELSQDDPH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2683 11.701 800.0 46608.0 25 0 5232.7 -1 0 56 990.4253176853348 1978.8360824374697 2 990.9288207888604 MULTI CID FTMS 0 0 0 2680 82877.1171875 1.0 0 0.0 3 2 ASQG 4 -1 30.79 0.0 0.0 1.556 0.0 0.0 983.4441956458336 649.2246187799436 1632.668814425777 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 ASQG 1.556 - 29 + 1 2.327 35862.2 0.3600000143051147 209 2472 2680 DOHH2_400M_050219_2,2683 DOHH2_400M_050219_2,2683, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2685 11.708 145.0 407380.0 25 0 43751.0 + 36002 SVQHVDAAEK 10 95 361.8526051208687 1082.535985962806 3 361.8523437380791 MULTI CID FTMS 0 0 0 2684 270189.75 0.2447617015841266 9 -0.0781698226928711 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 2 HVDAAEK 7 3 31.366 0.0 0.0 2.8975 0.0 0.0 314.16063912064413 0.0 314.16063912064413 0.0 8.02767656524125 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.2742275032520141 + HVDAAEK 2.8975 + + 253 + 1 2.327 57712.1 1.0 210 2473 2684 DOHH2_400M_050219_2,2685 DOHH2_400M_050219_2,2685,SVQHVDAAEK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2688 11.728 800.0 81847.0 25 0 8493.3 16594 KDRKGGSY 8 93 455.741114842288 909.467676751376 2 455.7410156130791 MULTI CID FTMS 0 0 0 2687 67498.53125 0.3274238609267206 15 -0.0993776321411132 1 Unmodified _KDRKGGSY_ nc|ENSG00000206503|P04439-2|HLA-A 8.593279151180031 0.7721714526254883 2 [VS]K{[NV]|[RG]}A 6 6 22.197 0.0 0.0 2.4406 0.0 0.0 0.0 308.09022392291087 308.09022392291087 6.254471812167777 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.3807196863200844 0.0 [VS]K{[NV]|[RG]}A 2.4406 - 112 1 2.327 54797.5 0.449999988079071 211 2475 2687 DOHH2_400M_050219_2,2688 DOHH2_400M_050219_2,2688,KDRKGGSY False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 2690 11.733 118.0 482540.0 25 0 157580.0 36097 SVRSPTPYKK 10 70 388.22523043846405 1161.6538619155922 3 388.2251464724541 MULTI CID FTMS 0 0 0 2689 203285.546875 0.3488258892083755 8 -0.0590934753417968 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 10.799506525563784 0.666336781075408 2 P{I|L}T{M(Oxidation (M))|F}KK 6 7 28.682 0.0 0.0 2.4691 0.0 0.0 429.2355426660293 0.0 429.2355426660293 0.0 19.7029064967336 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.1861818737241735 P{I|L}T{M(Oxidation (M))|F}KK 2.4691 - 49 + 1 2.327 51117.2 1.0 212 2476 2689 DOHH2_400M_050219_2,2690 DOHH2_400M_050219_2,2690,SVRSPTPYKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2692 11.75 800.0 83925.0 25 0 4842.6 + 36004 SVQHVDAAEK 10 106 542.2751843296418 1082.5358157260837 2 542.2751342654228 MULTI CID FTMS 0 0 0 2691 106892.25 0.2455077360856003 16 -0.0901508331298828 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 62.89396527753397 0.0289947886078699 2 [VS]AGHVDAAEK 11 2 + 96.666 0.0 0.0 8.9296 8.9296 90.158 0.0 0.0 0.0 20.510851361097224 16.575773191777927 16.575773191777927 6.7737263068969895 0 3.079689690656103 2.0 0.3252574989159953 0.0 [VS]AGHVDAAEK;[VS]QHVDAAEK;[VS]AGHVDAAA[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]AGHVD[DV]GK;[VS]QHVDAAA[VS];[VS]QHVD[DV]GK;[VS]AG{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]A[RH]WAAW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVWAAW 8.9296;8.3039;7.3634;7.0349;6.9689;6.7344;6.3432;5.6576;5.5479;5.4748 -;+;-;-;-;-;-;-;-;- + 1283 1 2.327 58620.9 0.449999988079071 213 2477 2691 DOHH2_400M_050219_2,2692 DOHH2_400M_050219_2,2692,SVQHVDAAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2695 11.771 800.0 148350.0 25 0 46488.0 + 6859 EEEEEQDEWMD 11 92 734.7546382574741 1467.494723581748 2 734.7558471560478 MULTI CID FTMS 0 0 0 2694 96618.765625 0.6278072174466943 -11 0.1365680694580078 1 Unmodified _EEEEEQDEWMD_ REV__ENSG00000198700|ENST00000361565|IPO9 1.3295316138638542 0.8688751186870782 2 [DP]YGDQQGV 9 -1 40.342 0.0 0.0 2.749 0.0 0.0 0.0 505.0755310782311 505.0755310782311 24.438323277537293 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.5269763493273799 0.0 [DP]YGDQQGV 2.749 - 889 1 2.327 87095.4 0.4099999964237213 214 2479 2694 DOHH2_400M_050219_2,2695 DOHH2_400M_050219_2,2695,EEEEEQDEWMD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2714 11.856 800.0 80499.0 25 0 7426.5 + -1 WSNCYDYQCCQ 11 82 763.7574136078745 1525.5002742825488 2 763.7578002810478 MULTI CID FTMS 0 0 0 2713 88053.5390625 0.5358282212438907 -3 0.0121726989746093 1 2 Carbamidomethyl (C) _WSNCYDYQC(Carbamidomethyl (C))C(Carbamidomethyl (C))Q_ REV__ENSG00000240053|ENST00000375864|LY6G5B;REV__nc|ENSG00000240053|Q8NDX9-2|LY6G5B 0.3070304955306653 0.8736993455979228 2 [DP][C(Carbamidomethyl (C))R]A{M(Oxidation (M))|F}DGY 9 -1 46.176 0.0 0.0 3.0269 0.0 0.0 0.0 441.0774169200476 441.0774169200476 29.768334806291826 0.0 0.0 0.0 0 0.0 1.154901959985743 0.2742275032520141 0.0 [DP][C(Carbamidomethyl (C))R]A{M(Oxidation (M))|F}DGY 3.0269 - 757 1 2.342 50037.9 0.3899999856948852 215 2497 2713 DOHH2_400M_050219_2,2714 DOHH2_400M_050219_2,2714,WSNCYDYQCCQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2715 11.87 800.0 148920.0 25 0 13798.0 + -1 MHSCYEGY 8 92 531.6849061046942 1061.3552592761882 2 531.6845580935478 MULTI CID FTMS 0 0 0 2713 116226.09375 0.9797043581840448 1 -0.0302295684814453 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))HSC(Carbamidomethyl (C))YEGY_ REV__ENSG00000160293|ENST00000371850|VAV2;REV__nc|ENSG00000160293|P52735-2|VAV2;REV__nc|ENSG00000160293|P52735-3|VAV2 5.760428011301431 0.7893668129297577 2 Y 1 -1 16.99 0.0 0.0 1.6008 0.0 0.0 880.2813437261867 0.0 880.2813437261867 0.0 6.712113404111033 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.6008 + + 14 + 1 2.342 94524.4 0.5099999904632568 216 2497 2713 DOHH2_400M_050219_2,2715 DOHH2_400M_050219_2,2715,MHSCYEGY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2717 11.875 43.0 1420600.0 25 0 217400.0 42288 VSSAKGKG 8 68 367.2140304312291 732.4135079292582 2 367.2138549685478 MULTI CID FTMS 0 0 0 2716 1374864.25 0.8370921721870735 -1 0.0302295684814453 1 Unmodified _VSSAKGKG_ ENSG00000135632|ENST00000389501|SMYD5 2.302733041254933 0.8103549651115762 2 V{I|L}TSSAR 7 6 + 75.438 0.0 0.0 10.3 10.3 99.731 0.0 0.0 0.0 60.744944827498415 16.255244784138227 16.255244784138227 75.43768243206245 0 0.4247425010840047 2.0 0.8252574989159953 0.3252574989159953 V{I|L}TSSAR 10.3 - 99 + 1 2.342 55145.4 1.0 217 2498 2716 DOHH2_400M_050219_2,2717 DOHH2_400M_050219_2,2717,VSSAKGKG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2718 11.888 800.0 135880.0 25 0 13502.0 + 1246 AIKKKDEL 8 99 472.7924037393302 943.5702545454604 2 472.7923461794853 MULTI CID FTMS 0 0 0 2716 121685.578125 0.5781299087627112 5 -0.1786127090454101 2 Unmodified _AIKKKDEL_ ENSG00000083845|ENST00000196551|RPS5;ENST00000599232.1_1_19:58906030-58906114:+|nuORF 51.629811660486645 0.1315812959312577 2 {I|L}AKKK{I|L}DE 8 4 + 71.704 0.0 0.0 7.5992 7.5992 85.858 0.0 0.0 0.0 7.257724967479845 4.381211580444656 4.381211580444656 4.381211580444656 0 0.9826446478103829 2.0 1.1861818737241734 0.4247425010840047 {I|L}AKKK{I|L}DE;{I|L}AKKWW{I|L};A{I|L}KKK{I|L}DE;A{I|L}KKWW{I|L};[{I|L}A]KKKDE{I|L};[{I|L}A][C(Carbamidomethyl (C))R]K{I|L}A{I|L};[{I|L}A]KKWW{I|L};KK[{I|L}A]KDE{I|L};KKKDE{I|L}A{I|L};[WK]WK{I|L}A{I|L} 7.5992;7.1349;6.83;6.8159;5.4854;4.3057;3.4569;2.4188;2.3745;2.3261 -;-;-;-;+;-;-;-;-;- + 369 + 1 2.342 89091.2 0.6299999952316284 218 2498 2716 DOHH2_400M_050219_2,2718 DOHH2_400M_050219_2,2718,AIKKKDEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2719 11.892 203.0 454160.0 25 0 30030.0 + + 642 AEADKPRRL 9 105 352.5366807066206 1054.5882127200618 3 352.5368835330009 MULTI CID FTMS 0 0 0 2716 171157.578125 0.4767128825934998 -2 0.0342979431152343 3 Unmodified _AELHTKLML_ ENSG00000105373|ENST00000246802|NOP53;ENST00000600410.5_1_19:48257983-48259211:+|nuORF;ENST00000598681.5_1_19:48248882-48259836:+|nuORF 13.042465956692816 0.4836390050082244 2 AEAD{I|L}G 6 -1 66.146 0.0 0.0 6.2722 0.0 0.0 0.0 495.3061007135376 495.3061007135376 54.36365118211582 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 AEAD{I|L}G 6.2722 - 77 + 1 2.342 77482.9 1.0 219 2498 2716 DOHH2_400M_050219_2,2719 DOHH2_400M_050219_2,2719,AELHTKLML False False AEADKPRRL 11.892303 352.536883533001 1646493.0 2716.0 ENSG00000105373|ENST00000246802|NOP53;;ENST00000600410.5_1_19:48257983-48259211:+|nuORF;;ENST00000598681.5_1_19:48248882-48259836:+|nuORF 6.1619367599487305 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 2720 11.906 800.0 131580.0 25 0 10586.0 -1 QSENMMMK 8 132 523.7019971472749 1045.3894413613498 2 523.7021362185478 MULTI CID FTMS 0 0 0 2716 100586.7109375 1.0 0 0.0 4 3 Oxidation (M) _QSENM(Oxidation (M))M(Oxidation (M))M(Oxidation (M))K_ ENSG00000135968|ENST00000309863|GCC2 23.1484247019978 0.5573009939494978 2 {[QS]|[NT]}{[ES]|[DT]|[{I|L}C]}M{M(Oxidation (M))|F}GN{M(Oxidation (M))|F} 9 -1 + 48.029 0.0 0.0 4.5943 4.5943 81.819 0.0 0.0 0.0 11.771949634605576 12.385606273598311 11.771949634605576 9.208187539523747 0 0.9247425010840048 0.8239087409443188 0.2887254899964357 0.3252574989159953 {[QS]|[NT]}{[ES]|[DT]|[{I|L}C]}M{M(Oxidation (M))|F}GN{M(Oxidation (M))|F};{[QS]|[NT]}{[ES]|[DT]|[{I|L}C]}M{M(Oxidation (M))|F}GGG{M(Oxidation (M))|F};[AG]S{[ES]|[DT]|[{I|L}C]}M{M(Oxidation (M))|F}GN{M(Oxidation (M))|F};[AG]S{[ES]|[DT]|[{I|L}C]}M{M(Oxidation (M))|F}GGG{M(Oxidation (M))|F};{[QS]|[NT]}{[ES]|[DT]|[{I|L}C]}M{M(Oxidation (M))|F}C{[QS]|[NT]};{[QS]|[NT]}{[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}C]|[YS]}M{[QS]|[NT]};[AG]S{[ES]|[DT]|[{I|L}C]}M{M(Oxidation (M))|F}C{[QS]|[NT]};{[QS]|[NT]}{[ES]|[DT]|[{I|L}C]}M{[MG]|[TS]}[YN];{[ES]|[DT]|[{I|L}C]}[WC(Carbamidomethyl (C))]{M(Oxidation (M))|F}GN{M(Oxidation (M))|F};{[QS]|[NT]}{[ES]|[DT]|[{I|L}C]}M[HC][QP] 4.5943;3.7135;3.4683;2.5916;2.3944;1.4091;1.2683;1.1767;1.1247;0.94417 -;-;-;-;-;-;-;-;-;- 374 1 2.342 84659.2 0.4799999892711639 220 2498 2716 DOHH2_400M_050219_2,2720 DOHH2_400M_050219_2,2720,QSENMMMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2721 11.917 632.0 122930.0 25 0 11688.0 + 6230 DTNADKQLS 9 130 496.2382223873922 990.4618918415844 2 496.2387878298759 MULTI CID FTMS 0 0 0 2716 85685.46875 0.2349590911272134 -19 0.1160888671875 5 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 85.76441949171179 0.0161200949243637 2 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S 9 0 + 66.014 0.0 0.0 6.6649 6.6649 89.567 0.0 0.0 0.0 3.4755050239080987 3.4755050239080987 3.4755050239080987 9.208187539523747 0 2.580173315600403 0.0 1.2614393726401687 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NA[KQ]D{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S;{[QG]|[NA]}DTDKQ{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}QAN{I|L}C{I|L}S;{[ES]|[DT]|[{I|L}C]}GGA[KQ]D{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}QANTD{I|L}S;[AG]GDTDKQ{I|L}S 6.6649;5.7353;5.7353;5.0869;4.81;4.6567;4.5438;4.1573;3.9359;3.9096 +;-;-;-;-;-;-;-;-;- + 1032 1 2.342 64825.0 1.0 221 2498 2716 DOHH2_400M_050219_2,2721 DOHH2_400M_050219_2,2721,DTNADKQLS True True DTNADKQLS 11.917151 496.238787829876 6750241.0 2716.0 ENSG00000163220|ENST00000368738|S100A9 7.467113335927327 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2723 11.922 8.6 4319000.0 25 0 531730.0 + 34849 SQGFSHSQM 9 67 512.7108457123446 1023.4071384914891 2 512.7115356326103 MULTI CID FTMS 0 0 0 2722 6613299.5 1.0 0 0.0 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 51.41523569358685 0.0372669606867193 2 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 50.709 0.0 0.0 4.9549 4.9549 77.285 0.0 0.0 0.0 4.158781176037891 4.158781176037891 4.158781176037891 4.158781176037891 0 1.5356668758921828 0.0 0.6421590589602533 0.5796896906561032 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F};[HS][YQ]QTN{M(Oxidation (M))|F};[HS][YQ][AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G[KT][C(Carbamidomethyl (C))S]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.9549;4.5485;4.0551;3.6514;2.7464;2.6728;2.3551;1.9564;1.0514;0.96708 -;-;-;-;-;-;-;-;-;- 133 1 2.349 34059.5 1.0 222 2499 2722 DOHH2_400M_050219_2,2723 DOHH2_400M_050219_2,2723,SQGFSHSQM True False SQGFSHSQM 11.921963 512.71153563261 124728336.0 2722.0 ENSG00000181143|ENST00000397910|MUC16 10.106639862060549 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2724 11.936 800.0 85681.0 25 0 5181.1 + 6312 DVHLWIDEK 9 97 577.7935656524606 1153.5725783717212 2 577.7941161990166 MULTI CID FTMS 0 0 0 2722 91227.8671875 0.283255742535686 22 -0.3222980499267578 2 Unmodified _DVHLWIDEK_ REV__ENSG00000132437|ENST00000444124|DDC;REV__nc|ENSG00000132437|P20711-2|DDC;REV__nc|ENSG00000132437|P20711-3|DDC;REV__nc|ENSG00000132437|P20711-4|DDC 20.453626601364224 0.2830276176381075 2 [VS]QHVDAAA 9 -1 51.978 0.0 0.0 4.5058 0.0 0.0 0.0 272.12740575296783 272.12740575296783 32.36880000633434 0.0 0.0 0.0 0 2.441962823435958 2.0 0.0 0.2742275032520141 [VS]QHVDAAA 4.5058 - 501 1 2.349 56112.1 0.5099999904632568 223 2499 2722 DOHH2_400M_050219_2,2724 DOHH2_400M_050219_2,2724,DVHLWIDEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2725 11.946 567.0 287490.0 25 0 24023.0 + 35712 SVHEEVQEK 9 118 542.7669362806582 1083.5193196281164 2 542.7655517458916 MULTI CID FTMS 0 0 0 2722 152208.15625 0.183044839448619 -2 0.0775775909423828 3 Unmodified _SVHEEVQEK_ REV__ENSG00000141013|ENST00000268699|GAS8;REV__nc|ENSG00000141013|O95995-2|GAS8 70.33199760932243 0.0209706178985989 2 SVEHVDAAEK 10 -1 + 120.65 0.0 0.0 11.135 11.135 97.993 0.0 0.0 0.0 66.32313497858561 18.279550148593486 18.279550148593486 21.75582814447204 0 3.2034021960761265 2.0 1.325257498915995 0.3252574989159953 SVEHVDAAEK;[VS]EHVDAAEK;[VS]EHVWAAW;[HV]ESVDAAEK;{[YC]|[HE]}VSVDAAEK;[HV]DTVDAAEK;[HV]ESVWAAW;WEH{[RE]|[WV]}AEK;{[YC]|[HE]}VSVWAAW;[HV]DTVWAAW 11.135;9.1276;8.5783;8.0917;7.7692;7.6176;7.5424;7.3337;7.2199;7.0683 -;-;-;-;-;-;-;-;-;- 3312 + 1 2.349 127440.9 1.0 224 2499 2722 DOHH2_400M_050219_2,2725 DOHH2_400M_050219_2,2725,SVHEEVQEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2726 11.958 702.0 173290.0 25 0 12888.0 + 5372 DLKGVGAK 8 146 394.2369721194465 786.4593913056931 2 394.2368957400322 MULTI CID FTMS 0 0 0 2722 113885.515625 0.6516118707928628 -2 0.0775775909423828 4 Unmodified _DLKGVGAK_ REV__ENSG00000188687|ENST00000394019|SLC4A5;REV__ENST00000451608.2_1_2:74452054-74542150:-|nuORF;REV__nc|ENSG00000188687|Q9BY07-2|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-4|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-5|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-6|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-7|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5;REV__nc|ENSG00000188687|Q9BY07|SLC4A5 16.942295170755138 0.6606234159769251 2 D{I|L}K 3 -1 53.188 0.0 0.0 6.7629 0.0 0.0 0.0 427.2315019811378 427.2315019811378 34.778842708858164 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 D{I|L}K 6.7629 + + 249 + 1 2.349 96649.2 1.0 225 2499 2722 DOHH2_400M_050219_2,2726 DOHH2_400M_050219_2,2726,DLKGVGAK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2727 11.966 461.0 156390.0 25 0 18066.0 + 34579 SPHDPAEK 8 94 440.7113457692983 879.4081386053966 2 440.7119628787041 MULTI CID FTMS 0 0 0 2722 104124.1484375 0.7914853227205654 -1 0.0473480224609375 5 Unmodified _SPHDPAEK_ REV__ENSG00000115221|ENST00000283249|ITGB6;REV__nc|ENSG00000115221|P18564-2|ITGB6 20.453626601364224 0.6087503291685402 2 [{M(Oxidation (M))|F}T]VDAAEK 8 -1 + 66.988 0.0 0.0 7.6174 7.6174 96.178 0.0 0.0 0.0 46.19070971708595 16.651603310239906 16.651603310239906 26.12949333758088 0 2.4247425010840047 0.0 0.3807196863200844 0.3807196863200844 [{M(Oxidation (M))|F}T]VDAAEK;[{M(Oxidation (M))|F}T]{[RE]|[WV]}AEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}KV{[ET]|[MV]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{M(Oxidation (M))|F}AEQ;{[CP]|[EA]}G{M(Oxidation (M))|F}KV{[ET]|[MV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}WAEQ;[{M(Oxidation (M))|F}T]VK[PS]{[DS]|[MA]|[CV]|TT};{[MS]|[{M(Oxidation (M))|F}A]}[WQ]V{[ET]|[MV]};{[MS]|[{M(Oxidation (M))|F}A]}{[DA]|[EG]}KV{[ET]|[MV]} 7.6174;4.6461;2.1071;1.9339;1.6088;1.5606;1.1452;0.93295;0.86102 -;-;-;-;-;-;-;-;- 128 + 1 2.349 60382.9 1.0 226 2499 2722 DOHH2_400M_050219_2,2727 DOHH2_400M_050219_2,2727,SPHDPAEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2729 11.971 78.0 908600.0 25 0 117510.0 + 7517 EHTPSASVAVS 11 101 362.18048205240336 1083.5196167574102 3 362.1796447634697 MULTI CID FTMS 0 0 0 2728 597952.125 0.6084998228988905 -2 0.0963344573974609 1 Unmodified _EHTPSASVAVS_ REV__ENSG00000181143|ENST00000397910|MUC16 27.628801355627647 0.4434699450731472 2 HVDAAEK 7 -1 38.013 0.0 0.0 3.5083 0.0 0.0 315.1431715579732 0.0 315.1431715579732 0.0 1.4053650274748364 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.3054621874040891 HVDAAEK 3.5083 - 477 + 1 2.349 65050.9 1.0 227 2500 2728 DOHH2_400M_050219_2,2729 DOHH2_400M_050219_2,2729,EHTPSASVAVS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2730 11.983 684.0 115530.0 25 0 17318.0 + 31377 RNVSTGDVN 9 98 481.2385851383361 960.4626173434724 2 481.2384826540947 MULTI CID FTMS 0 0 0 2728 121848.5625 1.0 0 0.0 2 Unmodified _RNVSTGDVN_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 28.49450938151212 0.1686335738423394 2 {[NV]|[RG]}RSTGDVN 9 2 + 51.577 0.0 0.0 5.37 5.37 83.113 0.0 0.0 0.0 2.3764301679958777 46.09243748081781 2.3764301679958777 8.836614351536184 0 0.9247425010840048 0.0 0.0 0.4247425010840047 {[NV]|[RG]}RSTGDVN;{[DA]|[EG]}S[RK]GDVN;[VS][RN]TGDVN;{[SA]|[TG]}D[RK]GDVN;[KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TGDVN;{[NV]|[RG]}RSWWN;[KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}VN;{[NV]|[RG]}[H{I|L}]{[YC]|[HE]}VN;[VS][RN]WWN;[KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T[RD]N 5.37;4.45;4.228;3.8623;3.7844;1.8183;1.7846;1.3748;0.67624;0.58668 -;-;-;-;-;-;-;-;-;- 217 1 2.349 66184.2 1.0 228 2500 2728 DOHH2_400M_050219_2,2730 DOHH2_400M_050219_2,2730,RNVSTGDVN False True RNVSTGDVN 11.98284 481.238482654095 621611.25 2728.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 5.212699095408122 2.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 2731 11.995 700.0 275650.0 25 0 30937.0 + 45232 YRNDQRNRPY 10 104 461.2283323882043 1380.663167764813 3 461.5627929568291 MULTI CID FTMS 0 0 0 2728 148607.265625 0.755276408406804 -1 0.0489864349365234 3 Unmodified _YRNDQRNRPY_ ENSG00000270647|ENST00000605844|TAF15;nc|ENSG00000270647|Q92804-2|TAF15 22.774965066869 0.4569865297271528 2 YR[DN]Y 5 5 31.51 0.0 0.0 2.2823 0.0 0.0 0.0 666.343659848029 666.343659848029 16.791746928241125 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.4247425010840047 YR[DN]Y 2.2823 - 114 + 1 2.349 150765.8 1.0 229 2500 2728 DOHH2_400M_050219_2,2731 DOHH2_400M_050219_2,2731,YRNDQRNRPY False True YRNDQRNRPY 11.994988 461.2288 1389404.5 2728.0 ENSG00000270647|ENST00000605844|TAF15;;nc|ENSG00000270647|Q92804-2|TAF15 6.726266384124756 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2732 12.009 800.0 110820.0 25 0 9460.0 + 5199 DISKKKAL 8 109 451.7871969963322 901.5598410594644 2 451.7870361208916 MULTI CID FTMS 0 0 0 2728 98986.3671875 1.0 0 0.0 4 Unmodified _DISKKKAL_ ENSG00000189057|ENST00000343597|FAM111B;nc|ENSG00000189057|Q6SJ93-2|FAM111B 36.12702656103203 0.299085846329477 2 {I|L}DSKKKA{I|L} 8 2 + 68.414 0.0 0.0 7.5884 7.5884 81.341 0.0 0.0 0.0 0.796896906561031 7.153500133247732 0.796896906561031 0.796896906561031 0 0.805462187404089 2.0 0.3807196863200844 0.0 {I|L}DSKKKA{I|L};D{I|L}SKKKA{I|L};{I|L}DSKK[{I|L}A]K;D{I|L}SKK[{I|L}A]K;KKSKA{NN|[MP]|[D{I|L}]|[EV]}{I|L};[KS]KKA{NN|[MP]|[D{I|L}]|[EV]}{I|L} 7.5884;7.5;6.795;6.7066;1.6265;1.6265 -;+;-;-;-;- + 167 + 1 2.349 76473.0 0.449999988079071 230 2500 2728 DOHH2_400M_050219_2,2732 DOHH2_400M_050219_2,2732,DISKKKAL False True DISKKKAL 12.008802 451.787036120892 346009.0625 2728.0 ENSG00000189057|ENST00000343597|FAM111B;;nc|ENSG00000189057|Q6SJ93-2|FAM111B 2.8186627626419067 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2735 12.029 800.0 140460.0 25 0 11321.0 + 10311 FSDHHENKY 9 138 588.7574834014393 1175.5004138696786 2 588.7571288943291 MULTI CID FTMS 0 0 0 2734 157068.484375 0.9727234619275332 -2 0.0466871261596679 1 Unmodified _FSDHHENKY_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 96.0343551737317 0.0125287991338421 2 YADHHENKY 9 2 + 98.808 0.0 0.0 8.4056 8.4056 92.938 0.0 0.0 0.0 21.237125054200234 12.206225184280797 12.206225184280797 9.208187539523747 0 2.4604093769761874 2.0 0.7134679910804405 0.3807196863200844 YADHHENKY;YADHHEGGKY;YADHHENYK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DHHENKY;{M(Oxidation (M))|F}SDHHENKY;YADHHEGGYK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DHHEGGKY;{M(Oxidation (M))|F}SDHHEGGKY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}NKY;YADHHE[YK]N 8.4056;7.6223;7.3672;7.0623;6.599;6.5839;6.2789;5.8156;5.7027;5.5643 -;-;-;+;+;-;-;-;-;- + 2094 + 1 2.349 87408.2 0.5799999833106995 231 2502 2734 DOHH2_400M_050219_2,2735 DOHH2_400M_050219_2,2735,FSDHHENKY True True FSDHHENKY 12.029223 588.757128894329 3692112.8125 2734.0 nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;;ENSG00000100991|ENST00000252015|TRPC4AP;;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP 9.25445032119751 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2736 12.033 187.0 554300.0 25 0 33701.0 + 25708 NIHKRIHGV 9 127 358.54893284341324 1072.6249691304397 3 358.5485717654228 MULTI CID FTMS 0 0 0 2734 229580.3125 0.4141686556043845 -3 0.0956735610961914 2 Unmodified _NIHKRIHGV_ ENSG00000071082|ENST00000264258|RPL31;ENST00000480540.1_1_14:59261390-59261744:+|nuORF;nc|ENSG00000071082|P62899-2|RPL31;nc|ENSG00000071082|P62899-3|RPL31 15.248480904072842 0.4239247793462406 2 N{I|L}HK 4 5 48.928 0.0 0.0 4.5615 0.0 0.0 0.0 577.3222139947874 577.3222139947874 37.84079546543006 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + N{I|L}HK 4.5615 + + 96 + 1 2.349 87202.0 1.0 232 2502 2734 DOHH2_400M_050219_2,2736 DOHH2_400M_050219_2,2736,NIHKRIHGV False True NIHKRIHGV 12.032821 358.548571765423 2292016.75 2734.0 ENST00000480540.1_1_14:59261390-59261744:+|nuORF;;ENSG00000071082|ENST00000264258|RPL31;;nc|ENSG00000071082|P62899-3|RPL31;;nc|ENSG00000071082|P62899-2|RPL31 4.126156171162923 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2737 12.047 800.0 134690.0 25 0 26702.0 + 6860 EEEEEQDEWMD 11 97 734.7546382574741 1467.494723581748 2 734.7564575076103 MULTI CID FTMS 0 0 0 2734 128365.0078125 0.8340872277862824 12 -0.1513891220092773 3 Unmodified _EEEEEQDEWMD_ REV__ENSG00000198700|ENST00000361565|IPO9 3.2813086475875832 0.8596665074481906 2 [DP]YGD{M(Oxidation (M))|F}TDGY 10 -1 44.835 0.0 0.0 3.0552 0.0 0.0 0.0 334.0711771898206 334.0711771898206 10.193933935066523 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.142642683904553 0.0 [DP]YGD{M(Oxidation (M))|F}TDGY 3.0552 - 2631 1 2.349 79919.1 0.5099999904632568 233 2502 2734 DOHH2_400M_050219_2,2737 DOHH2_400M_050219_2,2737,EEEEEQDEWMD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2738 12.048 77.0 734410.0 25 0 186120.0 + 10312 FSDHHENKY 9 82 392.8410578158269 1175.5013440476805 3 392.8402587771416 MULTI CID FTMS 0 0 0 2734 587160.375 0.9750756250450844 -1 0.004037857055664 4 Unmodified _FSDHHENKY_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 32.037481411007896 0.1235546156350648 2 SH{[NV]|[RG]}HDSE 8 8 31.074 0.0 0.0 2.6434 0.0 0.0 252.0859699933609 0.0 252.0859699933609 0.0 17.578890402793526 0.0 0.0 0 0.1331596456423734 0.0 0.5 0.7742275032520141 SH{[NV]|[RG]}HDSE 2.6434 - 97 1 2.349 48483.1 1.0 234 2502 2734 DOHH2_400M_050219_2,2738 DOHH2_400M_050219_2,2738,FSDHHENKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2741 12.069 800.0 139540.0 25 0 8957.6 + 33479 SIHRHTVV 8 117 474.7724006223941 947.5302483115884 2 474.7722045779228 MULTI CID FTMS 0 0 0 2740 99465.28125 0.7381390964148101 1 -0.0386581420898437 1 Unmodified _SIHRHTVV_ ENSG00000100162|ENST00000215980|CENPM 85.64151623876279 0.067157859451692 2 {[TV]|[{I|L}S]}HRHTVV 8 0 + 74.269 0.0 0.0 7.8381 7.8381 93.763 0.0 0.0 0.0 10.881932483411669 13.399480616943508 10.881932483411669 10.881932483411669 0 1.7104093769761874 2.0 1.4291746928241125 0.0 + + {[TV]|[{I|L}S]}HRHTVV;VTHRHTVV;{[TV]|[{I|L}S]}HRHVTV;[TP][Y{I|L}]GVTVV;[RH][HT]VTVV;[TP][Y{I|L}]KEVV;[TP][Y{I|L}]GVVTV;[RH]{[TV]|[{I|L}S]}HTVV;[RH][HT]VVTV;[RH]{[TV]|[{I|L}S]}HVTV 7.8381;6.6897;6.6327;3.9247;3.3628;3.0027;2.7192;2.4709;2.1573;1.2655 +;-;-;-;-;-;-;-;-;- + 845 1 2.349 90476.3 0.5600000023841858 235 2504 2740 DOHH2_400M_050219_2,2741 DOHH2_400M_050219_2,2741,SIHRHTVV True True SIHRHTVV 12.068664 474.772204577923 557267.75 2740.0 ENSG00000100162|ENST00000215980|CENPM 4.582570552825928 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2742 12.077 477.0 91626.0 25 0 7907.1 + 33062 SEQPLTSQSQS 11 87 596.2781721152052 1190.5417912972102 2 596.2780029177666 MULTI CID FTMS 0 0 0 2740 145115.046875 0.7569631242878023 -3 0.0434961318969726 2 Unmodified _SEQPLTSQSQS_ REV__ENSG00000153820|ENST00000392056|SPHKAP;REV__nc|ENSG00000153820|Q2M3C7-2|SPHKAP 45.739877483867886 0.1412225664835785 2 SQ[PS]D[{I|L}P]TN 9 -1 63.592 0.0 0.0 5.3415 0.0 0.0 233.10576942396648 0.0 233.10576942396648 0.0 14.74301211992909 0.0 0.0 0 0.8807196863200843 0.0 1.9361818737241727 0.805462187404089 SQ[PS]D[{I|L}P]TN 5.3415 - 636 + 1 2.349 38339.3 1.0 236 2504 2740 DOHH2_400M_050219_2,2742 DOHH2_400M_050219_2,2742,SEQPLTSQSQS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2743 12.091 800.0 96282.0 25 0 20834.0 -1 0 45 1061.3635991240578 2120.712645314916 2 1061.364794909954 MULTI CID FTMS 0 0 0 2740 137291.1875 0.6771851667569155 -1 0.0038671493530273 3 2 {[{M(Oxidation (M))|F}D]|MM}{[YC]|[HE]}H 5 -1 10.285 0.0 0.0 0.485 0.0 0.0 0.0 1452.4546856804034 1452.4546856804034 10.285371682087217 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {[{M(Oxidation (M))|F}D]|MM}{[YC]|[HE]}H 0.485 - 18 1 2.349 73879.8 0.4600000083446502 237 2504 2740 DOHH2_400M_050219_2,2743 DOHH2_400M_050219_2,2743, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2749 12.124 800.0 201050.0 25 0 13853.0 + 8527 ETENMCESEY 10 152 412.14633367852446 1233.4171716357737 3 412.1464721560478 MULTI CID FTMS 0 0 0 2748 157943.40625 0.2295321642738508 -16 0.2835969924926758 1 Unmodified _ETENMCESEY_ REV__ENSG00000156136|ENST00000286648|DCK 14.838274106304384 0.5985701837916485 2 DTHY 4 -1 31.146 0.0 0.0 2.5252 0.0 0.0 699.2128163068375 0.0 699.2128163068375 0.0 4.812900554180921 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 DTHY 2.5252 - 305 1 2.357 126350.2 0.3899999856948852 238 2509 2748 DOHH2_400M_050219_2,2749 DOHH2_400M_050219_2,2749,ETENMCESEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2752 12.144 800.0 79912.0 25 0 8858.1 22888 LSCPWNLSQG 10 95 581.2724307699804 1160.5303086067606 2 581.2722656130791 MULTI CID FTMS 0 0 0 2751 87697.1796875 0.1380205779443459 -17 0.3001384735107422 1 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 40.23920728925047 0.1550410903091231 2 [AG]SPQ{[ET]|[MV]}S{I|L}SAN 12 9 + 58.15 0.0 0.0 5.0107 5.0107 71.855 0.0 0.0 0.0 0.0755820133723332 9.09823369650912 0.0755820133723332 0.0755820133723332 0 1.0356668758921828 1.3979400086720375 1.555462187404089 0.0 [AG]SPQ{[ET]|[MV]}S{I|L}SAN;{[SA]|[TG]}GPQ{[ET]|[MV]}S{I|L}SAN;{[SA]|[TG]}[TA]{I|L}D[PS]QSAN;{[QS]|[NT]}PQ{[ET]|[MV]}S{I|L}SAN;[AG]SPQ[WM]{I|L}SAN;{[SA]|[TG]}GPQ[WM]{I|L}SAN;[AG]SP[SG][DV]S{I|L}SAN;{[SA]|[TG]}GP[SG][DV]S{I|L}SAN;[AG]SP[AG]{[ET]|[MV]}S{I|L}SAN;{[SA]|[TG]}GP[AG]{[ET]|[MV]}S{I|L}SAN 5.0107;5.0041;4.5129;4.5092;4.4409;4.4344;4.3102;4.3037;4.2267;4.2202 -;-;-;-;-;-;-;-;-;- 722 1 2.357 54741.3 0.4600000083446502 239 2511 2751 DOHH2_400M_050219_2,2752 DOHH2_400M_050219_2,2752,LSCPWNLSQG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2755 12.164 800.0 115370.0 25 0 16063.0 + -1 GECEFDEEGY 10 109 617.7156269372031 1233.416700941206 2 617.7162963747978 MULTI CID FTMS 0 0 0 2754 124000.375 0.4416144208040719 -9 0.0955543518066406 1 Carbamidomethyl (C) _GEC(Carbamidomethyl (C))EFDEEGY_ REV__ENST00000494125.1_1_7:150759074-150761528:+|nuORF 25.399314129420983 0.3980215340001851 2 HTEH{[ES]|[DT]|[{I|L}C]}C(Carbamidomethyl (C))GD 9 -1 62.317 0.0 0.0 5.0524 0.0 0.0 0.0 178.05103479556877 178.05103479556877 40.18909768562352 0.0 0.0 0.0 0 2.3182503180159344 1.154901959985743 0.7742275032520141 0.0 HTEH{[ES]|[DT]|[{I|L}C]}C(Carbamidomethyl (C))GD 5.0524 - 794 + 1 2.357 70120.8 0.4699999988079071 240 2513 2754 DOHH2_400M_050219_2,2755 DOHH2_400M_050219_2,2755,GECEFDEEGY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2757 12.17 166.0 224650.0 25 0 21506.0 + 6231 DTNADKQLS 9 83 496.2382223873922 990.4618918415844 2 496.2383911013603 MULTI CID FTMS 0 0 0 2756 291271.0 0.7986974971379214 -3 0.0366744995117187 1 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 61.60191391372663 0.0251951588191061 2 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S 9 0 + 54.006 0.0 0.0 5.4527 5.4527 85.233 0.0 0.0 0.0 5.253312076568903 37.80857585810999 5.253312076568903 9.208187539523747 0 1.0924778212679485 0.0 1.1861818737241734 0.3807196863200844 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}[Q{I|L}][C(Carbamidomethyl (C))Q]{I|L}S 5.4527;4.523;4.523;3.5977;0.39236 +;-;-;-;- + 72 1 2.357 33740.8 1.0 241 2514 2756 DOHH2_400M_050219_2,2757 DOHH2_400M_050219_2,2757,DTNADKQLS True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2759 12.175 62.0 631540.0 25 0 75628.0 + 34850 SQGFSHSQM 9 72 512.7108457123446 1023.4071384914891 2 512.7113525271416 MULTI CID FTMS 0 0 0 2758 897319.5625 0.1356840957376873 16 -0.1370801925659179 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 67.83816525789305 0.0219346420158844 2 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 72.584 0.0 0.0 7.0924 7.0924 88.082 0.0 0.0 0.0 14.981427974198454 7.513487579716767 7.513487579716767 7.513487579716767 0 1.579689690656103 1.154901959985743 0.8539171939081173 1.055462187404089 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]SW{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}[AG]{M(Oxidation (M))|F}{[QS]|[NT]} 7.0924;6.3582;6.1926;5.7695;5.6285;5.4584;5.0354;4.8645;4.3734;4.1303 -;-;-;-;-;-;-;-;-;- 158 1 2.357 38134.4 1.0 242 2515 2758 DOHH2_400M_050219_2,2759 DOHH2_400M_050219_2,2759,SQGFSHSQM True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2760 12.186 615.0 175560.0 25 0 19473.0 37488 TLFPAIEKNI 10 154 382.55587576612703 1144.6457978985811 3 382.5554992556572 MULTI CID FTMS 0 0 0 2758 89916.7421875 0.6922721536727405 5 -0.0653829574584961 2 Unmodified _TLFPAIEKNI_ ENSG00000112159|ENST00000369393|MDN1 8.97624648632007 0.6851160995914376 2 {I|L} 1 9 13.979 0.0 0.0 1.2213 0.0 0.0 1013.5511151366655 0.0 1013.5511151366655 0.0 -7.764706236572465 -7.764706236572465 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2213 + + 207 + 1 2.357 90273.1 1.0 243 2515 2758 DOHH2_400M_050219_2,2760 DOHH2_400M_050219_2,2760,TLFPAIEKNI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2762 12.202 800.0 165640.0 25 0 14156.0 + + 35713 SVQHVDAAEK 10 124 542.7669362806582 1083.5193196281164 2 542.7669555544853 MULTI CID FTMS 0 0 0 2761 147005.828125 0.1767885432036557 15 -0.1212091445922851 1 Unmodified _SVHEEVQEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 53.40400417844725 0.0329064971918313 2 SVEHVDAAEK 10 -1 + 119.51 0.0 0.0 11.029 11.029 98.167 0.0 0.0 0.0 67.53328487335232 18.521825181113627 18.521825181113627 22.80848766326997 0 3.159379381312206 2.0 1.2302046884880935 0.3494850021680094 SVEHVDAAEK;[VS]EHVDAAEK;[VS]EHVWAAW;{[YC]|[HE]}VSVDAAEK;[HV]ESVDAAEK;[HV]DTVDAAEK;WEH{[RE]|[WV]}AEK;{[YC]|[HE]}VSVWAAW;[HV]ESVWAAW;[HV]DTVWAAW 11.029;8.9244;7.9043;7.8203;7.5279;7.296;7.2683;6.8003;6.5079;6.2759 -;-;-;-;-;-;-;-;-;- 3375 + 1 2.357 103897.1 0.6700000166893005 244 2516 2761 DOHH2_400M_050219_2,2762 DOHH2_400M_050219_2,2762,SVHEEVQEK False False SVQHVDAAEK 12.202276 542.766955554485 0.0 2761.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 1.55836017926534 2.0 False 10.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 2765 12.222 779.0 139060.0 25 0 29975.0 + 19391 LERTQAEDNLN 11 97 434.88190383349104 0 434.8815490603447 PEAK CID FTMS 0 0 0 2764 85962.1640625 0.5933554947342945 -50 0.5889921188354492 1 Unmodified _LERTQAEDNLN_ ENSG00000183137|ENST00000517392|CEP57L1;nc|ENSG00000183137|Q8IYX8-2|CEP57L1 8.745405648335112 0.4618489994582195 2 A 1 10 6.9897 0.0 0.0 0.8055 0.0 0.0 362.4878849601477 431.19257532291255 793.6804602830603 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.8055 + + 13 + 1 2.357 89785.9 1.0 245 2518 2764 DOHH2_400M_050219_2,2765 DOHH2_400M_050219_2,2765,LERTQAEDNLN False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2766 12.229 402.0 233830.0 25 0 29204.0 + 18534 KYSFIDIETGQ 11 94 434.2206584284031 1299.6401458854093 3 434.2211486697197 MULTI CID FTMS 0 0 0 2764 90606.46875 0.4172091074654766 -10 0.1030530929565429 2 Unmodified _KYSFIDIETGQ_ REV__ENSG00000137200|ENST00000373451|CMTR1 11.494710602746466 0.7960433852372589 2 SAN 3 -1 17.69 0.0 0.0 1.3611 0.0 0.0 1009.5184367084264 0.0 1009.5184367084264 0.0 2.2049999164467984 0.0 0.0 0 0.5242275032520141 0.0 0.5 0.0 SAN 1.3611 - 38 1 2.357 78319.6 1.0 246 2518 2764 DOHH2_400M_050219_2,2766 DOHH2_400M_050219_2,2766,KYSFIDIETGQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2768 12.235 182.0 351860.0 25 0 26229.0 13081 HEDIVQESK 9 101 362.18048205240336 1083.5196167574102 3 362.1807433962822 MULTI CID FTMS 0 0 0 2767 155788.53125 0.1585365946735338 17 -0.1101703643798828 1 Unmodified _HEDIVQESK_ ENSG00000100403|ENST00000352645|ZC3H7B 15.847184025352805 0.4077185912009129 2 {I|L}DV[{M(Oxidation (M))|F}T]W 6 7 23.209 0.0 0.0 2.142 0.0 0.0 304.1420155255875 0.0 304.1420155255875 0.0 2.338583759443953 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DV[{M(Oxidation (M))|F}T]W 2.142 - 157 1 2.357 56572.9 1.0 247 2519 2767 DOHH2_400M_050219_2,2768 DOHH2_400M_050219_2,2768,HEDIVQESK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2772 12.26 800.0 132110.0 25 0 54239.0 -1 0 92 472.27266063213307 471.2653841655331 1 472.2724792361259 MULTI CID FTMS 0 0 0 2771 85617.03125 0.7461850801113771 -8 0.0791206359863281 1 2 GD[{I|L}P] 4 -1 12.179 0.0 0.0 2.5844 0.0 0.0 71.07421309638828 0.0 71.07421309638828 0.0 0.3965134072782028 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 GD[{I|L}P] 2.5844 - 37 1 2.357 86854.6 0.4300000071525574 248 2522 2771 DOHH2_400M_050219_2,2772 DOHH2_400M_050219_2,2772, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2776 12.281 583.0 143500.0 25 0 7085.1 + 7154 EENPKREDY 9 121 393.8476015057672 1178.5209751175016 3 393.8470336794853 MULTI CID FTMS 0 0 0 2775 109610.359375 1.0 0 0.0 1 Unmodified _EENPKREDY_ ENSG00000117360|ENST00000324862|PRPF3;ENST00000467329.5_1_1:150300781-150316915:+|nuORF;ENST00000519029.1_1_8:67896909-67897419:-|nuORF 12.240655878213236 0.5053430591993562 2 KPN[HC] 5 8 20.713 0.0 0.0 1.7576 0.0 0.0 581.2446156232437 0.0 581.2446156232437 0.0 -1.549471895720984 -1.549471895720984 0.0 0 0.0 0.0 0.0 0.0 KPN[HC] 1.7576 - 67 1 2.357 71584.2 1.0 249 2525 2775 DOHH2_400M_050219_2,2776 DOHH2_400M_050219_2,2776,EENPKREDY False True EENPKREDY 12.280573 393.847033679485 342109.375 2775.0 ENSG00000117360|ENST00000324862|PRPF3;;ENST00000519029.1_1_8:67896909-67897419:-|nuORF;;ENST00000467329.5_1_1:150300781-150316915:+|nuORF 5.821898937225342 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2781 12.298 147.0 309280.0 25 0 29628.0 + 36495 TAEEGLAK 8 87 409.7163457407818 817.4181385483637 2 409.7163574099541 MULTI CID FTMS 0 0 0 2780 329679.75 0.2953006623287705 -42 0.4932842254638672 1 Unmodified _TAEEGLAK_ REV__ENST00000368068.7_1_6:131949238-131949355:-|nuORF 42.09456458481378 0.1992492688217789 2 [TA]EEQ{I|L}K 7 -1 + 62.341 0.0 0.0 7.6266 7.6266 92.768 0.0 0.0 0.0 49.66518987873143 14.232591892753767 14.232591892753767 9.33053210369387 0 0.4247425010840047 2.0 0.805462187404089 0.4545391030138068 [TA]EEQ{I|L}K;[TA]EE[AG]{I|L}K;[TA]VVQE[TA];[TA]VV[AG]E[TA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[K{I|L}][TA];{[QN]|[E{I|L}]|[KN]}KQE[TA] 7.6266;6.4851;3.3747;2.2416;0.50107;0.45667 -;-;-;-;-;- 104 + 1 2.357 40641.1 1.0 250 2529 2780 DOHH2_400M_050219_2,2781 DOHH2_400M_050219_2,2781,TAEEGLAK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2782 12.303 270.0 244830.0 25 0 105030.0 + 32754 SEDHINRKY 9 81 387.8605152779647 1160.559716434094 3 387.8598815798759 MULTI CID FTMS 0 0 0 2780 110551.5859375 0.9038708808718284 -6 0.0330429077148437 2 Unmodified _SEDHINRKY_ ENSG00000052126|ENST00000429027|PLEKHA5;ENST00000510738.2_1_12:19413894-19459437:+|nuORF;nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;nc|ENSG00000052126|Q9HAU0|PLEKHA5 19.256988751693697 0.3154191944385105 2 DH{I|L} 3 6 23.698 0.0 0.0 2.0419 0.0 0.0 216.0777946146404 576.2897887138766 792.367583328517 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 + DH{I|L} 2.0419 + + 28 + 1 2.357 56350.3 1.0 251 2529 2780 DOHH2_400M_050219_2,2782 DOHH2_400M_050219_2,2782,SEDHINRKY False True SEDHINRKY 12.303223 387.859881579876 345628.0625 2780.0 ENSG00000052126|ENST00000429027|PLEKHA5;;nc|ENSG00000052126|Q9HAU0-4|PLEKHA5;;nc|ENSG00000052126|Q9HAU0-8|PLEKHA5;;nc|ENSG00000052126|Q9HAU0-5|PLEKHA5;;nc|ENSG00000052126|Q9HAU0|PLEKHA5;;nc|ENSG00000052126|Q9HAU0-3|PLEKHA5;;nc|ENSG00000052126|Q9HAU0-2|PLEKHA5;;ENST00000510738.2_1_12:19413894-19459437:+|nuORF 3.3315656979878745 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2787 12.325 408.0 250720.0 25 0 10662.0 32961 SELQSQMQQ 9 148 360.1672319205508 1077.4798663618524 3 360.1672241091728 MULTI CID FTMS 0 0 0 2786 128710.46875 0.6390016039677432 -11 0.0718631744384765 1 Unmodified _SELQSQMQQ_ ENSG00000188021|ENST00000338222|UBQLN2 13.042465956692816 0.4836390050082244 2 SE 2 7 36.198 0.0 0.0 3.3595 0.0 0.0 0.0 858.387433666464 858.387433666464 12.64136888583522 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + SE 3.3595 + + 81 + 1 2.357 82211.0 1.0 252 2533 2786 DOHH2_400M_050219_2,2787 DOHH2_400M_050219_2,2787,SELQSQMQQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2790 12.34 444.0 160480.0 25 0 38497.0 38992 TVQSKTAP 8 100 416.2311518925913 830.4477508519826 2 416.2314025759697 MULTI CID FTMS 0 0 0 2789 35947.69140625 0.344929925612212 1 -0.0104179382324218 1 Unmodified _TVQSKTAP_ ENSG00000105929|ENST00000310018|ATP6V0A4 18.13498045792455 0.6430038125133779 2 VVS{M(Oxidation (M))|F} 4 6 32.769 0.0 0.0 3.946 0.0 0.0 0.0 395.1972139947876 395.1972139947876 21.931838852904868 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 VVS{M(Oxidation (M))|F} 3.946 - 74 + 1 2.357 59890.5 1.0 253 2535 2789 DOHH2_400M_050219_2,2790 DOHH2_400M_050219_2,2790,TVQSKTAP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2797 12.367 282.0 297730.0 25 0 22883.0 + 8528 ETENMCESEY 10 107 412.14633367852446 1233.4171716357737 3 412.1466857790947 MULTI CID FTMS 0 0 0 2796 181219.734375 0.2633586221028211 16 -0.1582632064819336 1 Unmodified _ETENMCESEY_ REV__ENSG00000156136|ENST00000286648|DCK 14.838274106304384 0.5985701837916485 2 WY 2 -1 21.766 0.0 0.0 1.7647 0.0 0.0 866.2775018538392 0.0 866.2775018538392 0.0 9.257053412306028 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 WY 1.7647 - 117 1 2.376 69674.2 1.0 254 2541 2796 DOHH2_400M_050219_2,2797 DOHH2_400M_050219_2,2797,ETENMCESEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2798 12.37 152.0 493590.0 25 0 194730.0 -1 KELRNKQMK 9 67 397.5605457113091 1189.6598077341273 3 397.5604736208916 MULTI CID FTMS 0 0 0 2796 293798.46875 1.0 0 0.0 2 Oxidation (M) _KELRNKQM(Oxidation (M))K_ ENSG00000154781|ENST00000383794|CCDC174 10.150570793230772 0.5619192000662246 2 KTT 3 -1 24.425 0.0 0.0 2.0531 0.0 0.0 63.99863665636333 792.4472954045482 856.4459320609116 0.0 0.0 0.0 0.0 0 0.0 0.0 1.424742501084005 0.0 KTT 2.0531 - 23 + 1 2.376 65248.8 1.0 255 2541 2796 DOHH2_400M_050219_2,2798 DOHH2_400M_050219_2,2798,KELRNKQMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2799 12.375 254.0 259890.0 25 0 43424.0 23460 LTGQAAHKEED 11 77 400.194701394776 1197.562274784528 3 400.1947509646416 MULTI CID FTMS 0 0 0 2796 144257.65625 0.8033334130939355 -6 0.0305337905883789 3 Unmodified _LTGQAAHKEED_ ENSG00000168505|ENST00000306318|GBX2 6.623454094837244 0.8438980474264925 2 {I|L}T 2 9 14.776 0.0 0.0 1.2339 0.0 0.0 97.97847124929427 882.4286069055778 980.407078154872 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + {I|L}T 1.2339 + + 18 + 1 2.376 58506.1 1.0 256 2541 2796 DOHH2_400M_050219_2,2799 DOHH2_400M_050219_2,2799,LTGQAAHKEED False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2802 12.386 239.0 229270.0 25 0 40132.0 -1 LSCPWNLSQG 10 86 581.2724307699804 1160.5303086067606 2 581.2722045779228 MULTI CID FTMS 0 0 0 2801 233703.296875 0.3678095945288898 15 -0.1426334381103515 1 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 15.248480904072842 0.5916873121453583 2 {[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}SP[HA]{M(Oxidation (M))|F}AN 11 -1 + 55.965 0.0 0.0 4.8224 4.8224 88.195 0.0 0.0 0.0 8.818785311707025 12.381073231970952 8.818785311707025 55.96510757915677 0 1.1237125054200234 1.5228787452803376 0.3807196863200844 0.3252574989159953 {[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}SP[HA]{M(Oxidation (M))|F}AN 4.8224 - 134 + 1 2.376 44038.2 1.0 257 2543 2801 DOHH2_400M_050219_2,2802 DOHH2_400M_050219_2,2802,LSCPWNLSQG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2803 12.4 800.0 113440.0 25 0 19423.0 + 12798 GVSDSLEATKG 11 103 532.2663083477312 1062.5180637622625 2 532.2662841677666 MULTI CID FTMS 0 0 0 2801 108185.015625 0.7622751242248539 -6 0.0355749130249023 2 Unmodified _GVSDSLEATKG_ REV__ENSG00000181418|ENST00000421952|DDN 11.494710602746466 0.7960433852372589 2 [PS]QRDSR{[MS]|[{M(Oxidation (M))|F}A]} 9 -1 + 37.558 0.0 0.0 3.5348 3.5348 76.32 0.0 0.0 0.0 8.51937464544563 1.2739119898485356 1.2739119898485356 8.51937464544563 0 0.0 1.3979400086720375 0.4247425010840047 0.0 [PS]QRDSR{[MS]|[{M(Oxidation (M))|F}A]};[AG]SPRDSR{[MS]|[{M(Oxidation (M))|F}A]};[AG]PSRDSR{[MS]|[{M(Oxidation (M))|F}A]};[PS][AG]RDSR{[MS]|[{M(Oxidation (M))|F}A]};{[QS]|[NT]}PRDSR{[MS]|[{M(Oxidation (M))|F}A]};[QP]SRDSR{[MS]|[{M(Oxidation (M))|F}A]};[HV]KDDR{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[TP]NRDSR{[MS]|[{M(Oxidation (M))|F}A]};[PS]QS[RD]R{[MS]|[{M(Oxidation (M))|F}A]};[VG]QD[RD]R{[MS]|[{M(Oxidation (M))|F}A]} 3.5348;2.733;2.6941;2.6682;2.3849;2.3459;2.3166;2.3104;1.9358;1.9346 -;-;-;-;-;-;-;-;-;- 1488 1 2.376 77258.9 0.4699999988079071 258 2543 2801 DOHH2_400M_050219_2,2803 DOHH2_400M_050219_2,2803,GVSDSLEATKG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2808 12.428 765.0 177230.0 25 0 21458.0 + 32599 SAVTRNYSEK 10 181 385.5316780248471 1153.5732046747412 3 385.5313903689384 MULTI CID FTMS 0 0 0 2807 57848.0078125 0.5045470970337417 -1 0.0040597915649414 1 Unmodified _SAVTRNYSEK_ ENSG00000166200|ENST00000388901|COPS2;ENST00000558545.1_1_15:49431640-49447775:-|nuORF;nc|ENSG00000166200|P61201-2|COPS2 10.150570793230772 0.6772252923741907 2 [KQ]EHVDAAEK 10 8 + 36.515 0.0 0.0 3.1654 3.1654 80.481 0.0 0.0 0.0 20.69603485729612 9.589067614746511 9.589067614746511 18.135095056477933 0 1.0 0.0 0.3494850021680094 0.3054621874040891 [KQ]EHVDAAEK;[VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}VQ{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KQ]EHV[PS]{[CA]|SS}R;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ADAAEK;{[VA]|[{I|L}G]}SQ{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KQ]EH[C(Carbamidomethyl (C))S][{I|L}P]R;[KQ]EH[C(Carbamidomethyl (C))S][R{I|L}]P;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AD{[QD]|[EN]|[WG]|[KD]|[RS]}R 3.1654;1.5933;1.3146;1.0413;0.99381;0.93402;0.83011;0.65575;0.55243;0.50767 -;-;-;-;-;-;-;-;-;- 392 + 1 2.376 105634.6 1.0 259 2547 2807 DOHH2_400M_050219_2,2808 DOHH2_400M_050219_2,2808,SAVTRNYSEK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2809 12.442 800.0 68498.0 25 0 5220.9 + 33016 SENSRVSHY 9 91 539.7492589019716 1077.4839648707432 2 539.7485839724541 MULTI CID FTMS 0 0 0 2807 89643.34375 1.0 0 0.0 2 Unmodified _SENSRVSHY_ ENSG00000099942|ENST00000354336|CRKL;ENSG00000167193|ENST00000300574|CRK;nc|ENSG00000167193|P46108-2|CRK 44.391923383255 0.0526658857881241 2 VSHY 4 5 38.902 0.0 0.0 3.6105 0.0 0.0 573.2514515607437 0.0 573.2514515607437 0.0 28.52354684223119 0.0 0.0 0 1.174742501084005 0.0 0.4247425010840047 0.0 + VSHY 3.6105 + + 275 1 2.376 46029.9 0.4399999976158142 260 2547 2807 DOHH2_400M_050219_2,2809 DOHH2_400M_050219_2,2809,SENSRVSHY True True SENSRVSHY 12.441618 539.748583972454 1116473.8125 2807.0 ENSG00000099942|ENST00000354336|CRKL;;ENSG00000167193|ENST00000300574|CRK;;nc|ENSG00000167193|P46108-2|CRK 6.514455318450928 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2811 12.459 800.0 57428.0 25 0 5649.3 + 6232 DTNADKQLS 9 85 496.2382223873922 990.4618918415844 2 496.2389404177666 MULTI CID FTMS 0 0 0 2810 44712.01171875 0.1226053120694028 31 -0.2340459823608398 1 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 17.11289562659939 0.3734572693229295 2 {[DA]|[EG]}[Y{M(Oxidation (M))|F}][Y{I|L}]{I|L}S 8 6 {[DA]|[EG]}[Y{M(Oxidation (M))|F}][Y{I|L}]{I|L} + + 15.401 -18.372 -2.075 1.5549 1.5549 47.151 0.0 0.0 0.0 0.0 -6.025684359364405 -6.025684359364405 0.0 0 0.0 0.0 0.2302046884880938 0.0 {[DA]|[EG]}[Y{M(Oxidation (M))|F}][Y{I|L}]{I|L}S 1.5549 - 33 + 1 2.376 40169.2 0.4300000071525574 261 2548 2810 DOHH2_400M_050219_2,2811 DOHH2_400M_050219_2,2811,DTNADKQLS False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2812 12.473 800.0 74178.0 25 0 6368.5 -1 LDHDVNQNQ 9 80 562.7517102891604 0 562.7523071169853 PEAK CID FTMS 0 0 0 2810 87720.453125 1.0 0 0.0 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LDHDVNQNQ_ ENST00000558248.5_1_15:99860885-99892677:+|nuORF 14.838274106304384 0.2567717476666951 2 QA 2 -1 18.469 0.0 0.0 1.6439 0.0 0.0 260.11096336502766 661.2588588368953 921.369822201923 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.4247425010840047 QA 1.6439 - 111 + 1 2.376 52142.6 0.4399999976158142 262 2548 2810 DOHH2_400M_050219_2,2812 DOHH2_400M_050219_2,2812,LDHDVNQNQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2817 12.502 800.0 75388.0 25 0 4401.4 + 6887 EEEQENGKAY 10 100 598.7568583963019 1195.4991638594038 2 598.7575561404228 MULTI CID FTMS 0 0 0 2816 77425.8359375 0.8406170644846688 -16 0.145883560180664 1 Unmodified _EEEQENGKAY_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 39.94969957227396 0.1580982266129622 2 EEQEENGKAY 10 2 + 58.911 0.0 0.0 4.9277 4.9277 82.57 0.0 0.0 0.0 38.18016156380436 16.53212513775344 16.53212513775344 9.164539485499262 0 0.6069758080123702 1.3979400086720375 0.4247425010840047 0.0 EEQEENGKAY;EEQEEGGGKAY;EEQEEN[KQ]Y;EEQEE[W{I|L}]AY;EEQEEN[KA]GY;EEQEEN[YK]Q;EEQ[Y{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HC];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[Y{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HC];[DP][KP]NEEQ[HC];[AG]EE[Y{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HC] 4.9277;4.1611;3.3165;3.0647;2.8557;2.3327;1.7583;1.1586;1.0338;0.74258 -;-;-;-;-;-;-;-;-;- 372 + 1 2.376 51376.5 0.4199999868869781 263 2552 2816 DOHH2_400M_050219_2,2817 DOHH2_400M_050219_2,2817,EEEQENGKAY False True EEEQENGKAY 12.501774 598.757556140423 617331.125 2816.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 5.359464168548584 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2825 12.533 259.0 259140.0 25 0 112980.0 -1 0 60 388.2162323356215 387.2089558690215 1 388.2145873904228 MULTI CID FTMS 0 0 0 2824 177827.90625 0.701934742007056 -44 0.3558149337768554 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.376 58365.8 1.0 264 2559 2824 DOHH2_400M_050219_2,2825 DOHH2_400M_050219_2,2825, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2826 12.547 800.0 61130.0 25 0 7085.5 30307 QYYAYLTDTQ 10 58 633.287851525673 0 633.2881957888603 PEAK CID FTMS 0 0 0 2824 70039.6171875 1.0 0 0.0 2 Unmodified _QYYAYLTDTQ_ ENSG00000156471|ENST00000517309|PTDSS1;nc|ENSG00000156471|P48651-2|PTDSS1;nc|ENSG00000156471|P48651-3|PTDSS1 3.2813086475875832 0.3961065659209837 2 DN 2 9 8.5835 0.0 0.0 0.67877 0.0 0.0 421.195792065397 611.2677706354124 1032.4635627008097 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DN 0.67877 - 16 + 1 2.376 43830.5 0.3700000047683716 265 2559 2824 DOHH2_400M_050219_2,2826 DOHH2_400M_050219_2,2826,QYYAYLTDTQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2829 12.556 65.0 648740.0 25 0 63175.0 + 36496 TAEEGLAK 8 70 409.7163457407818 817.4181385483637 2 409.7162048220634 MULTI CID FTMS 0 0 0 2828 1030797.625 0.923305788085024 -10 0.0697641372680664 1 Unmodified _TAEEGLAK_ REV__ENST00000368068.7_1_6:131949238-131949355:-|nuORF 42.09456458481378 0.1992492688217789 2 [TA]EEQ{I|L}K 7 -1 + 66.062 0.0 0.0 8.0818 8.0818 93.429 0.0 0.0 0.0 56.4852575047756 14.859404086135228 14.859404086135228 9.33053210369387 0 0.4247425010840047 2.0 0.8494850021680094 0.4604093769761875 [TA]EEQ{I|L}K;[TA]EE[AG]{I|L}K;[TA]VVQE[TA];[TA]VV[AG]E[TA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[K{I|L}][TA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[K{I|L}]E[TA] 8.0818;6.9404;3.7607;2.6276;0.70314;0.39895 -;-;-;-;-;- 75 + 1 2.376 39617.7 1.0 266 2561 2828 DOHH2_400M_050219_2,2829 DOHH2_400M_050219_2,2829,TAEEGLAK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2837 12.596 800.0 58296.0 25 0 7965.8 19055 LDPSNMTYI 9 90 527.251226105095 1052.48789927699 2 527.2509033083916 MULTI CID FTMS 0 0 0 2836 95103.796875 1.0 0 0.0 1 Unmodified _LDPSNMTYI_ ENST00000394563.4_1_X:85340081-85340624:-|nuORF 7.289230182591677 0.6602208344931196 2 [EP]AA 4 8 30.802 0.0 0.0 2.9266 0.0 0.0 0.0 681.296223822165 681.296223822165 26.645293596321125 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [EP]AA 2.9266 - 77 1 2.376 45281.9 0.449999988079071 267 2568 2836 DOHH2_400M_050219_2,2837 DOHH2_400M_050219_2,2837,LDPSNMTYI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2840 12.607 187.0 361280.0 25 0 28827.0 + 26934 PDTGKLKEGF 10 93 364.5291035611952 1090.5654812837856 3 364.5289794802666 MULTI CID FTMS 0 0 0 2839 189825.921875 0.7723193440555736 -1 0.0040712356567382 1 Unmodified _PDTGKLKEGF_ REV__ENSG00000106436|ENST00000223167|MYL10 18.1463463914782 0.5430639438673815 2 EEK[KP]D[KA]{M(Oxidation (M))|F} 9 -1 + 21.602 0.0 0.0 1.9808 1.9808 68.841 0.0 0.0 0.0 1.997418399861747 4.4788463740602005 1.997418399861747 3.679767852945943 0 0.5 0.0 0.0 0.0 EEK[KP]D[KA]{M(Oxidation (M))|F};EEK{M(Oxidation (M))|F}{[HG]|PP}VV{M(Oxidation (M))|F} 1.9808;1.6433 -;- 46 + 1 2.376 61154.9 1.0 268 2570 2839 DOHH2_400M_050219_2,2840 DOHH2_400M_050219_2,2840,PDTGKLKEGF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2841 12.614 398.0 118500.0 25 0 19571.0 -1 SQGFSHSQM 9 81 512.7107371721182 1023.4069214110364 2 512.7116577029228 MULTI CID FTMS 0 0 0 2839 93984.4453125 0.261922357127013 -17 0.0985660552978515 2 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 20.41453444215458 0.284085796332423 2 {[QS]|[NT]}G 3 -1 14.85 0.0 0.0 1.451 0.0 0.0 0.0 748.2715203702738 748.2715203702738 0.2458860141291392 0.0 0.0 0.0 0 0.5 0.0 0.0 0.2887254899964357 {[QS]|[NT]}G 1.451 + + 22 1 2.376 41918.7 1.0 269 2570 2839 DOHH2_400M_050219_2,2841 DOHH2_400M_050219_2,2841,SQGFSHSQM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2846 12.642 800.0 118030.0 25 0 33929.0 + 39141 TYLGNKRCFSN 11 77 434.88190383349104 0 434.8819457888603 PEAK CID FTMS 0 0 0 2845 102033.171875 0.7042859359983313 6 -0.0540685653686523 1 Unmodified _TYLGNKRCFSN_ REV__ENSG00000069188|ENST00000392650|SDK2;REV__nc|ENSG00000069188|Q58EX2-3|SDK2;REV__nc|ENSG00000069188|Q58EX2-4|SDK2 2.9952420565917617 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.376 80232.2 0.8600000143051147 270 2574 2845 DOHH2_400M_050219_2,2846 DOHH2_400M_050219_2,2846,TYLGNKRCFSN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2847 12.655 756.0 120010.0 25 0 15356.0 + -1 TPLTRAMK 8 108 467.26281159666087 932.5110702601218 2 467.2630493044853 MULTI CID FTMS 0 0 0 2845 100228.7890625 0.1798817582384548 -42 0.3145208358764648 2 Oxidation (M) _TPLTRAM(Oxidation (M))K_ REV__ENSG00000155719|ENST00000646100|OTOA;REV__ENST00000563506.1_1_16:21742071-21771858:+|nuORF;REV__nc|ENSG00000155719|Q7RTW8-2|OTOA;REV__nc|ENSG00000155719|Q7RTW8-3|OTOA;REV__nc|ENSG00000155719|Q7RTW8-4|OTOA;REV__nc|ENSG00000155719|Q7RTW8|OTOA 21.74664581756881 0.5868176546531598 2 {I|L}TT{[CA]|SS} 5 -1 32.804 0.0 0.0 3.5178 0.0 0.0 425.2506886212906 0.0 425.2506886212906 0.0 16.2101498947667 0.0 0.0 0 0.8494850021680094 0.0 0.9247425010840048 0.0 {I|L}TT{[CA]|SS} 3.5178 - 153 1 2.376 74491.0 1.0 271 2574 2845 DOHH2_400M_050219_2,2847 DOHH2_400M_050219_2,2847,TPLTRAMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2852 12.676 247.0 287860.0 25 0 17464.0 + 42029 VQSRVSNPTV 10 115 362.8684291923922 1085.5834581773768 3 362.8678466677666 MULTI CID FTMS 0 0 0 2851 178849.109375 0.0182532952924328 -44 0.3421144485473633 1 Unmodified _VQSRVSNPTV_ REV__ENSG00000175809|ENST00000323684|CBLL2 26.268140514670165 0.3785003716575977 2 [TP]K[SG]GSRPTV 11 -1 + 52.732 0.0 0.0 4.8575 4.8575 83.982 0.0 0.0 0.0 4.239120985801925 44.83465789485666 4.239120985801925 9.50781977329818 0 0.9247425010840048 1.154901959985743 1.2302046884880935 0.3494850021680094 [TP]K[SG]GSRPTV;[KP]T[SG]GSRPTV;[TP]K[NS]SRPTV;[TP]K[{M(Oxidation (M))|F}V][TP]PTV;[KP]T[NS]SRPTV;{[VA]|[{I|L}G]}[VG][SG]GSRPTV;[KP]T[{M(Oxidation (M))|F}V][TP]PTV;{[VA]|[{I|L}G]}[VG][NS]SRPTV;{[MS]|[{M(Oxidation (M))|F}A]}PR[HT]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V 4.8575;3.9816;3.9298;3.4457;3.054;2.6842;2.5698;2.0752;1.5845 -;-;-;-;-;-;-;-;- 393 1 2.376 65077.0 1.0 272 2578 2851 DOHH2_400M_050219_2,2852 DOHH2_400M_050219_2,2852,VQSRVSNPTV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2859 12.712 800.0 99527.0 25 0 17037.0 29967 QSSVSEKEPAN 11 103 588.2803687876909 1174.5461846421815 2 588.2809936404228 MULTI CID FTMS 0 0 0 2858 42339.62109375 0.4638482342562731 1 -0.0164136886596679 1 Unmodified _QSSVSEKEPAN_ ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-2|WDR47;nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47 37.07464296494664 0.257459615863268 2 DS[RN][PS]QSAN 10 7 47.929 0.0 0.0 4.0806 0.0 0.0 100.06414229560704 0.0 100.06414229560704 0.0 35.75790763188651 0.0 0.0 0 1.5114393726401687 0.0 1.774227503252014 0.0 DS[RN][PS]QSAN 4.0806 - 299 1 2.376 64829.4 0.449999988079071 273 2584 2858 DOHH2_400M_050219_2,2859 DOHH2_400M_050219_2,2859,QSSVSEKEPAN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2862 12.733 800.0 134010.0 25 0 12876.0 + 38093 TPKNLSAAER 10 97 543.7987181524367 1085.5828833716732 2 543.7991210818291 MULTI CID FTMS 0 0 0 2861 116620.0390625 0.0306289072395109 -37 0.2432804107666015 1 Unmodified _TPKNLSAAER_ REV__ENST00000361337.2_1_20:39751926-39752103:+|nuORF 34.93206674587334 0.2110832994570416 2 TPKV[YN]GTP 9 -1 87.075 0.0 0.0 8.021 0.0 0.0 0.0 125.07219873599844 125.07219873599844 67.68954998148708 0.0 0.0 0.0 0 1.0228787452803374 1.6989700043360187 0.75 0.7742275032520141 TPKV[YN]GTP 8.021 - 736 + 1 2.376 91246.3 0.4699999988079071 274 2586 2861 DOHH2_400M_050219_2,2862 DOHH2_400M_050219_2,2862,TPKNLSAAER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2865 12.753 800.0 114020.0 25 0 13160.0 + -1 TPTIRTMK 8 123 482.26799599096046 962.5214390487208 2 482.2683593630791 MULTI CID FTMS 0 0 0 2864 96271.6796875 0.3504583657074081 -24 0.1730852127075195 1 Oxidation (M) _TPTIRTM(Oxidation (M))K_ REV__ENSG00000135447|ENST00000257905|PPP1R1A 24.020572477871973 0.5389365498350341 2 KTE{I|L}PTTG 8 -1 44.996 0.0 0.0 4.6748 0.0 0.0 63.99833704658915 68.05123315982655 132.0495702064157 0.0 0.0 0.0 0.0 0 0.7887254899964358 0.0 1.805462187404089 0.0 KTE{I|L}PTTG 4.6748 - 294 + 1 2.376 72529.8 0.4300000071525574 275 2588 2864 DOHH2_400M_050219_2,2865 DOHH2_400M_050219_2,2865,TPTIRTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2866 12.757 215.0 384200.0 25 0 95902.0 + 42088 VRDHHQAHKY 10 62 430.8881131772836 0 430.8881103396416 PEAK CID FTMS 0 0 0 2864 317744.46875 0.663795674285304 -198 1.778707504272461 2 Unmodified _VRDHHQAHKY_ REV__ENSG00000130940|ENST00000377022|CASZ1 1.4819007175156935 0.3961065659209837 2 D 1 -1 3.9794 0.0 0.0 0.46285 0.0 0.0 314.56057586452977 427.1607149713501 741.7212908358798 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.46285 + + 3 + 1 2.376 67668.1 1.0 276 2588 2864 DOHH2_400M_050219_2,2866 DOHH2_400M_050219_2,2866,VRDHHQAHKY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2871 12.778 317.0 279800.0 25 0 12800.0 + 36615 TAPSSLGPYY 10 109 352.5066953726337 1054.4982567181012 3 352.5061218142509 MULTI CID FTMS 0 0 0 2870 125728.9765625 0.9437432950241 -11 0.0857267379760742 1 Unmodified _TAPSSLGPYY_ REV__ENSG00000079308|ENST00000682258|TNS1;REV__nc|ENSG00000079308|Q9HBL0-1|TNS1 10.073929032068715 0.6785112666868882 2 TA{M(Oxidation (M))|F}P 4 -1 51.947 0.0 0.0 4.9262 0.0 0.0 0.0 635.2986544244749 635.2986544244749 27.254183475211647 0.0 0.0 0.0 0 0.4524170754574271 2.0 0.0 0.0 TA{M(Oxidation (M))|F}P 4.9262 - 82 + 1 2.39 77253.3 1.0 277 2592 2870 DOHH2_400M_050219_2,2871 DOHH2_400M_050219_2,2871,TAPSSLGPYY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2878 12.814 800.0 86551.0 25 0 13392.0 + -1 TQMTITTQK 9 89 534.2738828749713 1066.5332128167424 2 534.2744628787041 MULTI CID FTMS 0 0 0 2877 50697.57421875 0.4836365385749077 -16 0.1101179122924804 1 Oxidation (M) _TQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 12.872603262515298 0.4882369880199512 2 [QT]{M(Oxidation (M))|F}T{I|L}T[QT]K 9 -1 + 34.286 0.0 0.0 3.2147 3.2147 72.368 0.0 0.0 0.0 5.626116283480599 5.39500822772504 5.39500822772504 5.39500822772504 0 0.5 0.0 0.0 0.1203715150305281 [QT]{M(Oxidation (M))|F}T{I|L}T[QT]K;[QT]{M(Oxidation (M))|F}T{I|L}T[KT]Q 3.2147;2.7089 +;- + 111 + 1 2.39 59087.7 0.4399999976158142 278 2598 2877 DOHH2_400M_050219_2,2878 DOHH2_400M_050219_2,2878,TQMTITTQK False False TQMTITTQK 12.814387 534.274462878704 3030318.5 2877.0 ENSG00000181143|ENST00000397910|MUC16 5.738027652104695 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 2879 12.828 800.0 127600.0 25 0 16146.0 + 35732 SVHNELEK 8 114 478.24637716753904 954.478201401878 2 478.2468749880791 MULTI CID FTMS 0 0 0 2877 107869.5546875 0.954173583357676 -2 0.0079584121704101 2 Unmodified _SVHNELEK_ ENSG00000213347|ENST00000439742|MXD3;ENST00000503473.5_1_5:176737667-176737736:-|nuORF;nc|ENSG00000213347|Q9BW11-3|MXD3;nc|ENSG00000213347|Q9BW11-4|MXD3 30.63653989081413 0.3996269429323407 2 [VS]HVDAAEK 9 4 + 62.705 0.0 0.0 6.5695 6.5695 93.407 0.0 0.0 0.0 43.03904087461092 10.3976719887757 10.3976719887757 23.40224293663301 0 1.7346368802282015 2.0 0.3252574989159953 0.3054621874040891 [VS]HVDAAEK;[VS]HVDAA{[SA]|[TG]}V;[VS]H[TA][PS]EK;[VS]H[DG]{I|L}AEK;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{M(Oxidation (M))|F}EK;[VS]A{[DS]|[MA]|[CV]|TT}[TA]H[PA];[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MG]|[TS]}{[WT]|[RM]};[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{M(Oxidation (M))|F}{[SA]|[TG]}V 6.5695;4.1177;3.9469;3.8653;2.987;2.2152;1.2357;0.52955 -;-;-;-;-;-;-;- 225 + 1 2.39 84806.6 0.4699999988079071 279 2598 2877 DOHH2_400M_050219_2,2879 DOHH2_400M_050219_2,2879,SVHNELEK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2881 12.833 93.0 501880.0 25 0 38682.0 + 36497 TAEEGLAK 8 91 409.7163457407818 817.4181385483637 2 409.7162048220634 MULTI CID FTMS 0 0 0 2880 623703.5 0.558663541351182 28 -0.3222579956054687 1 Unmodified _TAEEGLAK_ REV__ENST00000368068.7_1_6:131949238-131949355:-|nuORF 42.09456458481378 0.1992492688217789 2 [TA]EEQ{I|L}K 7 -1 + 63.931 0.0 0.0 7.8211 7.8211 93.09 0.0 0.0 0.0 49.83873864062048 14.246972714976494 14.246972714976494 9.33053210369387 0 0.4247425010840047 2.0 0.805462187404089 0.4674165578762485 [TA]EEQ{I|L}K;[TA]EE[AG]{I|L}K;[TA]VVQE[TA];[TA]VV[AG]E[TA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[K{I|L}][TA] 7.8211;6.6797;3.6421;2.509;0.2428 -;-;-;-;- 91 + 1 2.39 42360.4 1.0 280 2599 2880 DOHH2_400M_050219_2,2881 DOHH2_400M_050219_2,2881,TAEEGLAK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2887 12.866 800.0 109030.0 25 0 15007.0 + 395 AEDQRTSTY 9 103 535.7408359740442 1069.4671190148883 2 535.7408325076103 MULTI CID FTMS 0 0 0 2886 72010.5859375 0.6259414310614578 1 -0.0163707733154296 1 Unmodified _AEDQRTSTY_ ENSG00000101445|ENST00000299824|PPP1R16B;nc|ENSG00000101445|Q96T49-2|PPP1R16B 47.594388314883695 0.0456443387682827 2 TY 2 7 26.955 0.0 0.0 2.5204 0.0 0.0 787.3455197490665 0.0 787.3455197490665 0.0 2.702789364562061 0.0 0.0 0 0.8494850021680094 0.0 0.2887254899964357 0.0 + TY 2.5204 + + 98 + 1 2.403 72861.2 0.5099999904632568 281 2604 2886 DOHH2_400M_050219_2,2887 DOHH2_400M_050219_2,2887,AEDQRTSTY True True AEDQRTSTY 12.865653 535.74083250761 802273.0 2886.0 nc|ENSG00000101445|Q96T49-2|PPP1R16B;;ENSG00000101445|ENST00000299824|PPP1R16B 5.92295503616333 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2889 12.874 307.0 127040.0 25 0 10646.0 + 34851 SQGFSHSQM 9 82 512.7107371721182 1023.4069214110364 2 512.7112304568291 MULTI CID FTMS 0 0 0 2888 149957.359375 0.4179115480805917 18 -0.2392482757568359 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 47.594388314883695 0.0456443387682827 2 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 51.02 0.0 0.0 4.9853 4.9853 79.825 0.0 0.0 0.0 15.713337517843648 7.513487579716767 7.513487579716767 6.478174818886373 0 1.1989700043360187 1.2218487496163564 0.6203715150305281 0.3494850021680094 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G[MN]SW{[QS]|[NT]};[AG]SG{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F} 4.9853;4.3523;4.2511;4.0855;3.6181;3.5208;3.4499;3.4473;3.3514;3.1895 -;-;-;-;-;-;-;-;-;- 150 1 2.403 35385.1 1.0 282 2605 2888 DOHH2_400M_050219_2,2889 DOHH2_400M_050219_2,2889,SQGFSHSQM True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2893 12.889 240.0 249390.0 25 0 27627.0 + 28442 PTDKTIHYAV 10 119 382.2035580555488 1143.5888447668465 3 382.2031432986259 MULTI CID FTMS 0 0 0 2892 139897.046875 0.7863218250892333 1 -0.0208797454833984 1 Unmodified _PTDKTIHYAV_ REV__CON__P13717 17.11289562659939 0.5604042439455784 2 PTDGSDK[TP]V 10 -1 46.52 0.0 0.0 4.0679 0.0 0.0 128.09515578437657 0.0 128.09515578437657 0.0 25.6048012094972 0.0 0.0 0 0.9247425010840048 0.0 1.3494850021680094 0.0 PTDGSDK[TP]V 4.0679 - 313 1 2.403 59446.3 1.0 283 2608 2892 DOHH2_400M_050219_2,2893 DOHH2_400M_050219_2,2893,PTDKTIHYAV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2894 12.903 800.0 34574.0 25 0 11466.0 -1 0 24 1055.4097567969952 3163.2074409911856 3 1055.744311511517 MULTI CID FTMS 0 0 0 2892 50761.15625 0.5246280791810818 -3 0.016270637512207 2 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.22097 0.0 0.0 2743.049098561301 270.0616116471313 3013.110710208433 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.22097 - 3 + 1 2.403 34367.8 0.3700000047683716 284 2608 2892 DOHH2_400M_050219_2,2894 DOHH2_400M_050219_2,2894, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2896 12.908 159.0 413060.0 25 0 62920.0 -1 IRAPTTMK 8 82 467.26281159666087 932.5110702601218 2 467.2628051638603 MULTI CID FTMS 0 0 0 2895 456449.40625 0.8191949888963445 -7 0.0616464614868164 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 22.736283301280096 0.5659792798204337 2 AT{M(Oxidation (M))|F}K 4 -1 47.423 0.0 0.0 5.0855 0.0 0.0 467.29283339668126 0.0 467.29283339668126 0.0 25.781609752233567 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 AT{M(Oxidation (M))|F}K 5.0855 - 130 1 2.403 58532.5 1.0 285 2609 2895 DOHH2_400M_050219_2,2896 DOHH2_400M_050219_2,2896,IRAPTTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2897 12.922 800.0 119340.0 25 0 46229.0 -1 0 83 554.2837646791759 553.2764882125758 1 554.2831909060478 MULTI CID FTMS 0 0 0 2895 86303.6484375 0.824196605674737 8 -0.1069927215576171 2 2 Y 1 -1 11.99 0.0 0.0 2.167 0.0 0.0 372.2027252504649 0.0 372.2027252504649 0.0 1.6110964736695976 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.167 - 24 + 1 2.403 76542.4 0.4399999976158142 286 2609 2895 DOHH2_400M_050219_2,2897 DOHH2_400M_050219_2,2897, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2899 12.927 14.0 3311900.0 25 0 160520.0 38120 TPLYFFISV 9 86 362.8684291923922 1085.5834581773768 3 362.8682433962822 MULTI CID FTMS 0 0 0 2898 3871200.75 0.395093778621381 -12 0.1242914199829101 1 Unmodified _TPLYFFISV_ ENSG00000180433|ENST00000641861|OR6K6;nc|ENSG00000180433|Q8NGW6|OR6K6 26.88365393820708 0.1891292719743517 2 [KP]W{[CA]|SS}GKPTV 10 8 + 52.713 0.0 0.0 4.8557 4.8557 73.506 0.0 0.0 0.0 1.7172645365322978 13.561062652429918 1.7172645365322978 1.7172645365322978 0 0.5 0.0 1.610924374808178 0.0 [KP]W{[CA]|SS}GKPTV;[TP]{[NV]|[RG]}{[CA]|SS}GKPTV;[TP]K[{M(Oxidation (M))|F}V][TP]PTV;[TP]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}[TP]PTV;[KP]T[{M(Oxidation (M))|F}V][TP]PTV;{[VA]|[{I|L}G]}[NP]{[CT]|[{M(Oxidation (M))|F}G]}GKPTV;{[VA]|[{I|L}G]}{[QS]|[NT]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KPTV;{[VA]|[{I|L}G]}[NP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}KPTV;{[VA]|[{I|L}G]}{[QS]|[NT]}[QT]RPTV;{[MS]|[{M(Oxidation (M))|F}A]}PR[HT]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V 4.8557;4.6976;4.2762;4.2552;3.5902;3.5249;3.5209;3.3587;2.6901;2.2096 -;-;-;-;-;-;-;-;-;- 354 1 2.409 45714.3 1.0 287 2610 2898 DOHH2_400M_050219_2,2899 DOHH2_400M_050219_2,2899,TPLYFFISV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2900 12.941 800.0 153460.0 25 0 13298.0 + 43493 WWRVCDQNA 9 129 589.2651015472502 1176.5156501613003 2 589.2638427615166 MULTI CID FTMS 0 0 0 2898 105757.0390625 0.3140285078820641 -11 0.0940542221069336 2 Unmodified _WWRVCDQNA_ REV__ENST00000523376.5_1_11:14926604-14927012:+|nuORF 25.399314129420983 0.2080152500878129 2 DQQAEWQGQ 9 -1 64.006 0.0 0.0 5.4403 0.0 0.0 88.06374931024818 0.0 88.06374931024818 0.0 42.67570208699867 0.0 0.0 0 0.3494850021680094 0.0 0.0 2.024227503252014 DQQAEWQGQ 5.4403 - 2663 + 1 2.409 95891.0 0.4900000095367431 288 2610 2898 DOHH2_400M_050219_2,2900 DOHH2_400M_050219_2,2900,WWRVCDQNA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2906 12.974 800.0 89444.0 25 0 5458.7 43291 WKFPQEQNK 9 103 602.8117054083397 1203.6088578834792 2 602.8105346560478 MULTI CID FTMS 0 0 0 2905 87858.703125 0.5133697177659235 -3 0.0118436813354492 1 Unmodified _WKFPQEQNK_ ENSG00000223443|ENST00000333796|USP17L2;ENSG00000226430|ENST00000530447|USP17L7;ENSG00000236125|ENST00000526929|USP17L4;ENSG00000237038|ENST00000527080|USP17L8 24.020572477871973 0.2255576514309169 2 {[SA]|[TG]}TADK{I|L}AADNK 12 10 + 119.09 0.0 0.0 9.894 9.894 92.464 0.0 0.0 0.0 102.92690783144158 16.84060188726957 16.84060188726957 9.098233696509126 0 2.7198565171985374 1.2218487496163564 0.0 1.3116042352767734 {[SA]|[TG]}TADK{I|L}AADNK;{[SA]|[TG]}TADK{I|L}AADGGK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WK{I|L}AADNK;{[SA]|[TG]}TWRRADNK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WK{I|L}AADGGK;{[SA]|[TG]}TWRRADGGK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WQ]{I|L}AADNK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADRRADNK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK[RV]DNK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[TP]{I|L}AADNK 9.894;9.1381;7.513;7.1364;6.7516;6.375;5.8889;5.851;5.4369;5.2033 -;-;-;-;-;-;-;-;-;- 757 + 1 2.409 53005.3 0.5 289 2615 2905 DOHH2_400M_050219_2,2906 DOHH2_400M_050219_2,2906,WKFPQEQNK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2907 12.977 178.0 371670.0 25 0 72895.0 2592 ASMANLRAEKN 11 84 402.2100696382737 1203.6083795150212 3 402.2101928591728 MULTI CID FTMS 0 0 0 2905 128978.453125 0.5747387951598854 -4 0.0158557891845703 2 Unmodified _ASMANLRAEKN_ ENSG00000121931|ENST00000369763|LRIF1 8.155526934196011 0.8366696279279818 2 {I|L}AADNK 6 9 19.971 0.0 0.0 1.6592 0.0 0.0 573.2747135988087 0.0 573.2747135988087 0.0 8.113314800944197 0.0 0.0 0 0.0 0.0 0.0 0.6050541008457975 {I|L}AADNK 1.6592 - 111 + 1 2.409 53311.5 1.0 290 2615 2905 DOHH2_400M_050219_2,2907 DOHH2_400M_050219_2,2907,ASMANLRAEKN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2909 12.982 23.0 2807900.0 25 0 285880.0 + 28483 PTKGRADLTQ 10 67 543.7987181524367 1085.5828833716732 2 543.7989379763603 MULTI CID FTMS 0 0 0 2908 2504030.5 0.657654709481813 -7 0.0741691589355468 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 22.65808497894818 0.4596126414678359 2 TPKGP[WH]GP 9 -1 71.137 0.0 0.0 6.5529 0.0 0.0 0.0 125.07241235904532 125.07241235904532 67.15735931149851 0.0 0.0 0.0 0 1.305462187404089 1.5228787452803376 0.0 0.0 TPKGP[WH]GP 6.5529 - 131 + 1 2.409 55201.8 1.0 291 2616 2908 DOHH2_400M_050219_2,2909 DOHH2_400M_050219_2,2909,PTKGRADLTQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2910 12.996 800.0 254390.0 25 0 19770.0 + 19982 LIKHKPSV 8 133 461.2976405705755 920.580728207951 2 461.2975341677666 MULTI CID FTMS 0 0 0 2908 154856.671875 0.5289434971103202 -3 0.0276556015014648 2 Unmodified _LIKHKPSV_ ENSG00000146731|ENST00000275603|CCT6A;ENST00000492618.5_1_7:56127237-56129562:+|nuORF;nc|ENSG00000146731|P40227-2|CCT6A 41.8396318013385 0.2035142800366642 2 {I|L}{I|L}KHKPSV 8 0 + 72.253 0.0 0.0 7.8486 7.8486 85.016 0.0 0.0 0.0 36.40978057358331 3.296310119312764 3.296310119312764 3.296310119312764 0 0.8494850021680094 2.0 0.5176452685714268 0.4247425010840047 + + {I|L}{I|L}KHKPSV;{I|L}{I|L}KHKV[PS] 7.8486;7.4905 +;- + 163 + 1 2.409 157170.2 0.5899999737739563 292 2616 2908 DOHH2_400M_050219_2,2910 DOHH2_400M_050219_2,2910,LIKHKPSV False True LIKHKPSV 12.996003 461.297534167767 1094473.5 2908.0 nc|ENSG00000146731|P40227-2|CCT6A;;ENSG00000146731|ENST00000275603|CCT6A;;ENST00000492618.5_1_7:56127237-56129562:+|nuORF 4.151257991790772 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2911 13.01 800.0 214570.0 25 0 33704.0 + 41150 VPAKKITAA 9 136 449.78969692362006 897.5648409140401 2 449.7894164919853 MULTI CID FTMS 0 0 0 2908 128087.7890625 0.4984674968318356 -2 0.0238246917724609 3 Unmodified _VPAKKITAA_ ENSG00000188846|ENST00000396203|RPL14 34.40172386719151 0.1061884637610825 2 VPAK[K{I|L}]TAA 9 0 + 66.626 0.0 0.0 7.4229 7.4229 86.527 0.0 0.0 0.0 34.61845386551025 5.406075122407678 5.406075122407678 5.406075122407678 0 0.8110312860818771 2.0 0.8494850021680094 0.0 + + VPAK[K{I|L}]TAA;VPAK[K{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]};VAPK[K{I|L}]TAA;[PA]KK{I|L}TAAV;VAPK[K{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]};[KP]AK{I|L}TAAV;[KA]PK{I|L}TAAV;[KA]KP{I|L}TAAV;[PA]KK{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V;[KA]K[{I|L}T]PAAV 7.4229;6.8206;4.9431;4.4439;4.3408;3.5309;2.6203;2.1457;1.9685;1.7484 +;-;-;-;-;-;-;-;-;- + 296 + 1 2.409 136140.8 0.5199999809265137 293 2616 2908 DOHH2_400M_050219_2,2911 DOHH2_400M_050219_2,2911,VPAKKITAA True True VPAKKITAA 13.009817 449.789416491985 1691254.875 2908.0 ENSG00000188846|ENST00000396203|RPL14 4.584421316782634 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2913 13.02 442.0 214480.0 25 0 31849.0 + -1 GVGNKLTMK 9 95 482.26799599096046 962.5214390487208 2 482.2682067751884 MULTI CID FTMS 0 0 0 2912 221875.828125 0.8076958911184499 5 -0.0911331176757812 1 Oxidation (M) _GVGNKLTM(Oxidation (M))K_ REV__ENST00000604354.1_1_5:180743383-180748792:+|nuORF 34.40172386719151 0.1061884637610825 2 GTTP{I|L}E{M(Oxidation (M))|F}K 8 -1 52.817 0.0 0.0 5.4873 0.0 0.0 71.07429701972812 0.0 71.07429701972812 0.0 30.94457550631504 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 GTTP{I|L}E{M(Oxidation (M))|F}K 5.4873 - 376 1 2.409 76326.8 1.0 294 2617 2912 DOHH2_400M_050219_2,2913 DOHH2_400M_050219_2,2913,GVGNKLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2914 13.034 800.0 92558.0 25 0 12860.0 7700 EKWCFNWM 8 106 572.2413889552713 1142.4682249773423 2 572.2410766482353 MULTI CID FTMS 0 0 0 2912 94800.515625 0.8809707178147306 -5 0.0644855499267578 2 Unmodified _EKWCFNWM_ ENST00000206595.10_1_14:31061530-31061584:+|nuORF 9.347437153973935 0.7675937258251505 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WK]MD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 8 4 + 27.14 0.0 0.0 2.3756 2.3756 77.38 0.0 0.0 0.0 3.0495374279561105 -1.4141645271627643 -1.4141645271627643 10.550762695790109 0 0.0 0.0 0.7742275032520141 0.2742275032520141 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WK]MD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[KP]S[YN]{I|L}D[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[YN]K[PS]{I|L}D[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WQ][{M(Oxidation (M))|F}V][C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 2.3756;1.4521;1.2131;0.66845 -;-;-;- 738 1 2.409 60223.4 0.4799999892711639 295 2617 2912 DOHH2_400M_050219_2,2914 DOHH2_400M_050219_2,2914,EKWCFNWM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2917 13.054 800.0 233300.0 25 0 15920.0 + 32238 RWMGSKGF 8 155 484.7427814943727 967.4710100555452 2 484.7437011599541 MULTI CID FTMS 0 0 0 2916 81769.0390625 0.794232787301487 1 -0.0440177917480468 1 Unmodified _RWMGSKGF_ REV__ENST00000591935.5_1_19:1274361-1274472:+|nuORF 32.30548876998284 0.3644845974844379 2 [TP]KG{M(Oxidation (M))|F}SKG 8 -1 55.672 0.0 0.0 5.7544 0.0 0.0 0.0 162.05408979044742 162.05408979044742 24.178374370451657 0.0 0.0 0.0 0 0.9749073637206092 1.6989700043360187 1.3516784832448856 0.0 [TP]KG{M(Oxidation (M))|F}SKG 5.7544 - 3608 1 2.409 144819.8 0.5799999833106995 296 2619 2916 DOHH2_400M_050219_2,2917 DOHH2_400M_050219_2,2917,RWMGSKGF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2918 13.068 800.0 88534.0 25 0 12714.0 -1 STMSTNGIPR 10 106 540.2608740070067 1078.5071950808133 2 540.2615234255791 MULTI CID FTMS 0 0 0 2916 89499.59375 0.8257993101055559 -4 0.0806169509887695 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 36.506200033944 0.1944608063770638 2 R{I|L}GN{[MG]|[TS]}ETS 9 -1 45.2 0.0 0.0 4.191 0.0 0.0 115.06382186103671 0.0 115.06382186103671 0.0 31.52758118237223 0.0 0.0 0 0.0 0.0 0.75 0.3252574989159953 R{I|L}GN{[MG]|[TS]}ETS 4.191 - 659 1 2.409 56833.0 0.5600000023841858 297 2619 2916 DOHH2_400M_050219_2,2918 DOHH2_400M_050219_2,2918,STMSTNGIPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2919 13.082 800.0 107190.0 25 0 14973.0 + 43872 YFPDVDGK 8 114 470.7223236964984 939.4300944597968 2 470.7229186892509 MULTI CID FTMS 0 0 0 2916 90696.609375 1.0 0 0.0 3 Unmodified _YFPDVDGK_ REV__ENSG00000137731|ENST00000292079|FXYD2;REV__ENST00000317594.6_1_11:117693022-117695420:-|nuORF;REV__ENST00000534383.5_1_11:117691389-117694973:-|nuORF;REV__nc|ENSG00000137731|P54710-2|FXYD2 20.453626601364224 0.6087503291685402 2 HVDAAEK 7 -1 54.567 0.0 0.0 5.8085 0.0 0.0 171.05288893867345 0.0 171.05288893867345 0.0 45.27504092367239 0.0 0.0 0 2.610924374808178 0.0 0.0 0.0 HVDAAEK 5.8085 - 220 1 2.409 71030.7 0.5400000214576721 298 2619 2916 DOHH2_400M_050219_2,2919 DOHH2_400M_050219_2,2919,YFPDVDGK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2922 13.097 442.0 179090.0 25 0 34170.0 -1 RTRKTPPTM 9 73 552.30264099678 1102.59072906036 2 552.3023559451103 MULTI CID FTMS 0 0 0 2921 142182.390625 0.5366765552383873 -3 0.051736831665039 1 Oxidation (M) _RTRKTPPTM(Oxidation (M))_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 10.073929032068715 0.563993802247229 2 T{M(Oxidation (M))|F} 2 -1 25.701 0.0 0.0 2.331 0.0 0.0 836.4970228609444 0.0 836.4970228609444 0.0 15.24350030035414 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 T{M(Oxidation (M))|F} 2.331 + + 37 + 1 2.4 64576.0 1.0 299 2621 2921 DOHH2_400M_050219_2,2922 DOHH2_400M_050219_2,2922,RTRKTPPTM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2923 13.101 185.0 331490.0 25 0 21649.0 -1 HGRFKRRM 8 85 368.537200989183 1102.589773567749 3 368.5378600955009 MULTI CID FTMS 0 0 0 2921 125209.65625 0.4499460688062087 -7 0.132598876953125 2 Oxidation (M) _HGRFKRRM(Oxidation (M))_ ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8 3.944395688203298 0.8003900995685364 2 {M(Oxidation (M))|F} 1 -1 16.99 0.0 0.0 1.5409 0.0 0.0 937.54332383806 0.0 937.54332383806 0.0 -4.921525057367404 -4.921525057367404 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.5409 + + 27 + 1 2.4 59803.9 1.0 300 2621 2921 DOHH2_400M_050219_2,2923 DOHH2_400M_050219_2,2923,HGRFKRRM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2926 13.121 800.0 258620.0 25 0 26457.0 + 38086 TPKERTHT 8 162 485.2600264843348 968.5055000354696 2 485.2599670290947 MULTI CID FTMS 0 0 0 2925 27749.68359375 0.2810963849500609 1 -0.0301589965820312 1 Unmodified _TPKERTHT_ REV__ENSG00000142528|ENST00000270617|ZNF473 41.8396318013385 0.2035142800366642 2 TPRG[KC]TVG 9 -1 75.013 0.0 0.0 7.7452 0.0 0.0 0.0 66.03576074771718 66.03576074771718 45.71590443982387 0.0 0.0 0.0 0 1.0151201868453454 1.6989700043360187 1.4049471895720984 0.0 TPRG[KC]TVG 7.7452 - 5954 + 1 2.4 162096.6 0.5899999737739563 301 2623 2925 DOHH2_400M_050219_2,2926 DOHH2_400M_050219_2,2926,TPKERTHT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2927 13.135 800.0 112640.0 25 0 8215.0 18941 LDAKGKVW 8 115 458.7643996388481 915.5142463444962 2 458.7648498415947 MULTI CID FTMS 0 0 0 2925 93858.4921875 0.7557137630772923 -1 0.003972053527832 2 Unmodified _LDAKGKVW_ ENSG00000151491|ENST00000281172|EPS8 28.486842064014134 0.4448922141344407 2 {I|L}DAK 4 4 52.083 0.0 0.0 5.689 0.0 0.0 0.0 485.2497652643188 485.2497652643188 36.48749628565108 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.5 0.0 + {I|L}DAK 5.689 + + 138 + 1 2.4 76010.3 0.5600000023841858 302 2623 2925 DOHH2_400M_050219_2,2927 DOHH2_400M_050219_2,2927,LDAKGKVW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2929 13.143 280.0 194010.0 25 0 23060.0 + + -1 SQGFSHSQM 9 96 513.2029240215461 1024.391295109892 2 513.2033569216728 MULTI CID FTMS 0 0 0 2928 268473.9375 0.6904104001072362 -30 0.3531274795532226 1 Carbamidomethyl (C) _SQGGTWTC(Carbamidomethyl (C))E_ ENSG00000181143|ENST00000397910|MUC16 29.081581746732265 0.1611639662936252 2 {[QS]|[NT]}G{M(Oxidation (M))|F}SHSE{M(Oxidation (M))|F} 9 -1 + 70.038 0.0 0.0 6.837 6.837 91.652 0.0 0.0 0.0 10.830181779913346 10.830181779913346 10.830181779913346 10.830181779913346 0 1.0 1.0457574905606752 1.3539171939081172 0.0 {[QS]|[NT]}G{M(Oxidation (M))|F}SHSE{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}ETN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}TEN{M(Oxidation (M))|F};{[QS]|[NT]}G[MD]SW{[QS]|[NT]};{[QS]|[NT]}G[MD]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}[YQ]HSE{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}ETN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}TEN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}E{M(Oxidation (M))|F}{[QS]|[NT]} 6.837;5.7798;5.0751;4.8883;4.6175;4.4667;4.4265;4.2528;3.5482;2.9398 -;-;-;-;-;-;-;-;-;- 350 + 1 2.4 45536.9 1.0 303 2624 2928 DOHH2_400M_050219_2,2929 DOHH2_400M_050219_2,2929,SQGGTWTCE False False SQGFSHSQM 13.142768 513.203356921673 0.0 2928.0 ENSG00000181143|ENST00000397910|MUC16 5.173707405726115 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 2934 13.16 143.0 406830.0 25 0 55133.0 + -1 NKVANLMK 8 73 467.26281159666087 932.5110702601218 2 467.2626220583916 MULTI CID FTMS 0 0 0 2933 404142.09375 0.725318454726496 12 -0.0874595642089843 1 Oxidation (M) _NKVANLM(Oxidation (M))K_ REV__ENSG00000254685|ENST00000370898|FPGT;REV__nc|ENSG00000254685|O14772-2|FPGT;REV__nc|ENSG00000254685|O14772|FPGT 16.942295170755138 0.6606234159769251 2 {I|L}T{M(Oxidation (M))|F}K 4 -1 35.79 0.0 0.0 3.838 0.0 0.0 425.2516651837906 0.0 425.2516651837906 0.0 22.830918867322296 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}T{M(Oxidation (M))|F}K 3.838 - 75 1 2.4 50237.5 1.0 304 2628 2933 DOHH2_400M_050219_2,2934 DOHH2_400M_050219_2,2934,NKVANLMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2937 13.18 800.0 166550.0 25 0 71852.0 -1 MISRNFFFYFQ 11 72 505.9069250516775 0 505.9073058962822 PEAK CID FTMS 0 0 0 2936 129966.578125 0.0866643182098549 101 -0.7885017395019531 1 Oxidation (M) _M(Oxidation (M))ISRNFFFYFQ_ ENST00000514335.1_1_5:37051847-37064632:+|nuORF 1.3296431237094175 0.4761840153648598 2 G 1 -1 5.4846 0.0 0.0 0.54313 0.0 0.0 591.8107850625363 357.9463289850219 949.7571140475582 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.54313 - 2 + 1 2.4 105798.0 0.6499999761581421 305 2630 2936 DOHH2_400M_050219_2,2937 DOHH2_400M_050219_2,2937,MISRNFFFYFQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2939 13.198 800.0 107040.0 25 0 23479.0 29175 QGAGEGSTREW 11 99 589.2651015472502 1176.5156501613003 2 589.7669555544853 MULTI CID FTMS 0 0 0 2938 63230.47265625 0.2630737248019203 11 -0.1012830734252929 1 Unmodified _QGAGEGSTREW_ ENSG00000149115|ENST00000358252|TNKS1BP1;ENST00000528882.5_1_11:57067274-57087552:-|nuORF;nc|ENSG00000149115|Q9C0C2-2|TNKS1BP1 15.248480904072842 0.7179608125786238 2 NQEAEWQ{[QG]|[NA]} 9 9 54.391 0.0 0.0 4.623 0.0 0.0 88.0577898566299 0.0 88.0577898566299 0.0 41.69006780958576 0.0 0.0 0 0.4247425010840047 0.0 0.0 1.1549471895720984 NQEAEWQ{[QG]|[NA]} 4.623 - 1179 + 1 2.394 70386.3 0.4900000095367431 306 2631 2938 DOHH2_400M_050219_2,2939 DOHH2_400M_050219_2,2939,QGAGEGSTREW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2948 13.242 800.0 104790.0 25 0 19475.0 + 421 AEEKQTKSF 9 106 534.2728758072717 1066.5311986813433 2 534.2729369997978 MULTI CID FTMS 0 0 0 2947 91824.5234375 0.7571286679005115 -7 0.0275135040283203 1 Unmodified _AEEKQTKSF_ ENSG00000115677|ENST00000310931|HDLBP;ENST00000479169.5_1_2:242177863-242181895:-|nuORF;ENST00000487169.5_1_2:242174673-242189369:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP 38.558800761779466 0.0833680625411826 2 TKS{M(Oxidation (M))|F} 4 5 41.846 0.0 0.0 3.9236 0.0 0.0 585.2773304669937 0.0 585.2773304669937 0.0 29.526595898321503 0.0 0.0 0 1.5387254899964358 0.0 0.3807196863200844 0.0 + TKS{M(Oxidation (M))|F} 3.9236 + + 111 1 2.394 70743.8 0.5 307 2639 2947 DOHH2_400M_050219_2,2948 DOHH2_400M_050219_2,2948,AEEKQTKSF True True AEEKQTKSF 13.24188 534.272936999798 4583567.0 2947.0 ENSG00000115677|ENST00000310931|HDLBP;;nc|ENSG00000115677|Q00341-2|HDLBP;;ENST00000479169.5_1_2:242177863-242181895:-|nuORF;;ENST00000487169.5_1_2:242174673-242189369:-|nuORF 4.771128575007121 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2950 13.247 34.0 1821700.0 25 0 183030.0 + 28484 PTKGRADLTQ 10 65 543.7987181524367 1085.5828833716732 2 543.7988769412041 MULTI CID FTMS 0 0 0 2949 1638367.125 0.4302982154636008 17 -0.1630535125732422 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 17.44264345198275 0.5548713957087773 2 TPKV[YN]GTP 9 -1 71.648 0.0 0.0 6.6 0.0 0.0 0.0 125.0723360651 125.0723360651 58.37295775337353 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.4247425010840047 0.0 TPKV[YN]GTP 6.6 - 269 + 1 2.394 55423.9 1.0 308 2640 2949 DOHH2_400M_050219_2,2950 DOHH2_400M_050219_2,2950,PTKGRADLTQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2951 13.261 800.0 18646.0 25 0 5763.4 -1 0 21 1055.4100758809896 3163.2083982431686 3 1055.743701159954 MULTI CID FTMS 0 0 0 2949 81870.4921875 1.0 0 0.0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.394 28078.2 0.3600000143051147 309 2640 2949 DOHH2_400M_050219_2,2951 DOHH2_400M_050219_2,2951, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2953 13.277 800.0 164440.0 25 0 24233.0 + 41151 VPAKKITAA 9 129 449.78969692362006 897.5648409140401 2 449.7893249392509 MULTI CID FTMS 0 0 0 2952 88540.46875 0.3445648187790529 23 -0.19830322265625 1 Unmodified _VPAKKITAA_ ENSG00000188846|ENST00000396203|RPL14 17.11289562659939 0.3734572693229295 2 VPAK 4 5 41.588 0.0 0.0 4.6334 0.0 0.0 0.0 499.2886141412719 499.2886141412719 25.121789719755512 0.0 0.0 0.0 0 0.4332070678992465 1.5228787452803376 0.0 0.0 + VPAK 4.6334 + + 148 + 1 2.394 108456.2 0.4799999892711639 310 2641 2952 DOHH2_400M_050219_2,2953 DOHH2_400M_050219_2,2953,VPAKKITAA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2954 13.282 225.0 378160.0 25 0 21580.0 10374 FSPRVNRIL 9 113 367.8893750467364 1100.6462957404092 3 367.8892089724541 MULTI CID FTMS 0 0 0 2952 112341.8203125 0.1697168983810287 -16 0.1181545257568359 2 Unmodified _FSPRVNRIL_ nc|ENSG00000226746|Q8TEV8|SMCR5 11.640296217721598 0.521594087909532 2 KH{I|L} 3 8 26.484 0.0 0.0 2.4063 0.0 0.0 704.3961659162125 0.0 704.3961659162125 0.0 12.98963451112506 0.0 0.0 0 0.6307196863200843 0.0 0.0 0.0 KH{I|L} 2.4063 - 58 1 2.394 73653.4 1.0 311 2641 2952 DOHH2_400M_050219_2,2954 DOHH2_400M_050219_2,2954,FSPRVNRIL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 2957 13.294 298.0 255760.0 25 0 19335.0 -1 STMSTNGIPR 10 102 360.50908466706 1078.50542460138 3 360.5096008181572 MULTI CID FTMS 0 0 0 2956 98784.5 0.977334606207169 -5 0.0638751983642578 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 7.945399516374404 0.6898843699695153 2 PR 2 -1 19.508 0.0 0.0 1.8088 0.0 0.0 807.3407606009924 0.0 807.3407606009924 0.0 8.249212204192737 0.0 0.0 0 0.0 0.0 0.0 0.4559771852360797 PR 1.8088 + + 76 + 1 2.394 67402.3 1.0 312 2643 2956 DOHH2_400M_050219_2,2957 DOHH2_400M_050219_2,2957,STMSTNGIPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2961 13.318 800.0 176980.0 25 0 21469.0 13116 HETPAQES 8 142 449.6987210472499 897.3828891612998 2 449.6989318728447 MULTI CID FTMS 0 0 0 2960 72005.484375 0.7139110811536408 1 -0.0163936614990234 1 Unmodified _HETPAQES_ ENST00000290573.6_1_2:75061256-75061319:+|nuORF 8.593279151180031 0.7721714526254883 2 [PA]ETHEQS 8 5 [PA]ETHEQ + + 15.841 0.69155 0.087279 1.7653 1.7653 47.229 0.0 0.0 0.0 0.0 -1.3257688890023935 -1.3257688890023935 0.0 0 0.0 0.0 0.1237125054200235 0.0 [PA]ETHEQS 1.7653 - 208 + 1 2.394 111363.0 0.5 313 2646 2960 DOHH2_400M_050219_2,2961 DOHH2_400M_050219_2,2961,HETPAQES False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 2964 13.331 360.0 115210.0 25 0 6610.6 + 12554 GVGWPKSSV 9 80 458.7459397314354 915.4773265296708 2 458.7457763552666 MULTI CID FTMS 0 0 0 2963 117582.75 0.6394987682590961 -14 0.1158370971679687 1 Unmodified _GVGWPKSSV_ REV__ENST00000531905.1_1_11:65631029-65631326:+|nuORF 14.838274106304384 0.4350285940865338 2 [VG]GP{M(Oxidation (M))|F} 5 -1 45.317 0.0 0.0 4.9501 0.0 0.0 0.0 455.2536715143188 455.2536715143188 24.88438100576431 0.0 0.0 0.0 0 0.6109243748081782 2.0 0.0 0.0 [VG]GP{M(Oxidation (M))|F} 4.9501 - 107 + 1 2.394 36332.3 1.0 314 2648 2963 DOHH2_400M_050219_2,2964 DOHH2_400M_050219_2,2964,GVGWPKSSV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2967 13.353 800.0 111620.0 25 0 5169.7 + 35551 STQMTITTQK 10 128 577.789498246625 1153.56444356005 2 577.7900268435478 MULTI CID FTMS 0 0 0 2966 78403.015625 0.0783874753080201 -36 0.3817310333251953 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 85.76441949171179 0.012343647646002 2 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 75.003 0.0 0.0 6.5019 6.5019 88.347 0.0 0.0 0.0 50.426385717363374 18.218438871965013 18.218438871965013 9.164539485499262 0 1.2856668758921828 0.0 1.274227503252014 1.1022338482433751 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}[YV]VP;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}[YV]VP;{[MG]|[TS]}Q{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}A]TQK;[{I|L}T][YV]{I|L}TEQ{[MG]|[TS]} 6.5019;5.7074;5.7074;4.9161;4.6027;3.9746;3.8114;2.8501;2.4046;2.1703 +;-;-;-;-;-;-;-;-;- + 662 + 1 2.408 71789.2 0.5 315 2650 2966 DOHH2_400M_050219_2,2967 DOHH2_400M_050219_2,2967,STQMTITTQK True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2973 13.385 800.0 93029.0 25 0 12363.0 + 8198 EPSPSLIQSAN 11 110 571.7877059441247 1141.5608589550493 2 571.7880126833916 MULTI CID FTMS 0 0 0 2972 72462.3828125 0.2970170730014015 -15 0.1265830993652343 1 Unmodified _EPSPSLIQSAN_ REV__ENSG00000156509|ENST00000428847|FBXO43;REV__ENST00000520987.1_1_8:101149771-101157363:-|nuORF 45.739877483867886 0.1412225664835785 2 {[SA]|[TG]}N[KS][HV]QSAN 11 -1 {[SA]|[TG]}N[KS][HV]Q + + 45.49 9.9431 1.1678 3.9849 3.9849 51.65 0.0 0.0 0.0 0.0 28.819459175083608 0.0 0.0 0 1.305462187404089 0.0 0.3494850021680094 0.4247425010840047 {[SA]|[TG]}N[KS][HV]QSAN 3.9849 - 123 + 1 2.408 61394.1 0.4900000095367431 316 2655 2972 DOHH2_400M_050219_2,2973 DOHH2_400M_050219_2,2973,EPSPSLIQSAN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2974 13.399 800.0 114740.0 25 0 17053.0 + 13307 HKKRKYEL 8 86 551.3297922383329 1100.6450315434656 2 551.3292114138603 MULTI CID FTMS 0 0 0 2972 84374.53125 0.8070757018795254 -10 0.0709304809570312 2 Unmodified _HKKRKYEL_ ENSG00000142937|ENST00000396651|RPS8;ENST00000470475.1_1_1:45241268-45242451:+|nuORF 34.40172386719151 0.3279500639400574 2 HKK 3 5 30.49 0.0 0.0 2.7702 0.0 0.0 0.0 704.3740938775999 704.3740938775999 4.291746928241125 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 + HKK 2.7702 + + 26 + 1 2.408 72336.3 0.5099999904632568 317 2655 2972 DOHH2_400M_050219_2,2974 DOHH2_400M_050219_2,2974,HKKRKYEL False True HKKRKYEL 13.398721 551.32921141386 528354.125 2972.0 ENST00000470475.1_1_1:45241268-45242451:+|nuORF;;ENSG00000142937|ENST00000396651|RPS8 2.768630584081014 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2976 13.405 193.0 239060.0 25 0 27887.0 + -1 ESGCVECNK 9 77 513.2029240215461 1024.391295109892 2 513.2031127810478 MULTI CID FTMS 0 0 0 2975 258670.71875 0.6652003397097488 2 -0.0102834701538085 1 Carbamidomethyl (C) _ESGC(Carbamidomethyl (C))VECNK_ REV__ENSG00000204186|ENST00000374423|ZDBF2 21.74664581756881 0.2544899275067181 2 {[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}QTD{M(Oxidation (M))|F} 9 -1 + 32.712 0.0 0.0 3.1933 3.1933 77.897 0.0 0.0 0.0 10.999161495794432 17.883643918355364 10.999161495794432 9.208187539523756 0 0.7742275032520141 0.0 0.7856668758921829 0.0 {[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}QTD{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}[AG]TD{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{M(Oxidation (M))|F}SH{[QS]|[NT]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{M(Oxidation (M))|F}P{[QV]|[N{I|L}]|[RA]|[KV]}D{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}QTD{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}[YQ]H{[QS]|[NT]}{M(Oxidation (M))|F};[HS][YQ]QTD{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TD{M(Oxidation (M))|F};[HS][YQ][AG]TD{M(Oxidation (M))|F} 3.1933;2.2944;2.1087;1.7022;1.4849;1.4808;1.0922;1.0841;0.57661;0.17999 -;-;-;-;-;-;-;-;-;- 138 1 2.408 43487.6 1.0 318 2656 2975 DOHH2_400M_050219_2,2976 DOHH2_400M_050219_2,2976,ESGCVECNK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2980 13.429 800.0 72995.0 25 0 6739.2 -1 ICWCQCCPHSC 11 82 755.7600697274643 1509.5055865217284 2 755.7603637576103 MULTI CID FTMS 0 0 0 2979 104413.046875 0.9751086237067008 -11 0.0911664962768554 1 4 Carbamidomethyl (C) _IC(Carbamidomethyl (C))WC(Carbamidomethyl (C))QC(Carbamidomethyl (C))C(Carbamidomethyl (C))PHSC_ ENSG00000143195|ENST00000271417|ILDR2 0.3506318815782774 0.8734936314171269 2 [DP]YGEE{M(Oxidation (M))|F}DGV 10 -1 52.88 0.0 0.0 3.5032 0.0 0.0 0.0 398.0766063794035 398.0766063794035 24.03335040558744 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.6505149978319906 0.0 [DP]YGEE{M(Oxidation (M))|F}DGV 3.5032 - 1451 1 2.408 45570.0 0.449999988079071 319 2659 2979 DOHH2_400M_050219_2,2980 DOHH2_400M_050219_2,2980,ICWCQCCPHSC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2981 13.443 800.0 61905.0 25 0 17671.0 -1 0 31 1152.441141772459 3454.3015959175773 3 1152.774462878704 MULTI CID FTMS 0 0 0 2979 73923.3125 0.1927678149282425 -18 0.1521015167236328 2 2 GP 2 -1 9.464 0.0 0.0 0.27398 0.0 0.0 2147.7524758998024 1149.4325655572875 3297.18504145709 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GP 0.27398 - 7 + 1 2.408 51153.5 0.3499999940395355 320 2659 2979 DOHH2_400M_050219_2,2981 DOHH2_400M_050219_2,2981, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 2992 13.496 800.0 107210.0 25 0 4345.4 + -1 QDRDMMEK 8 112 542.7214783210633 1083.4284037089265 2 542.7220336794853 MULTI CID FTMS 0 0 0 2991 84362.7578125 0.2355069988878967 -42 0.3286943435668945 1 2 Oxidation (M) _QDRDM(Oxidation (M))M(Oxidation (M))EK_ REV__ENSG00000103335|ENST00000301015|PIEZO1 11.640296217721598 0.738950129755968 2 DQ{M(Oxidation (M))|F}EK 5 -1 30.495 0.0 0.0 2.8147 0.0 0.0 418.1240752376436 0.0 418.1240752376436 0.0 12.49663721503278 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.6861818737241735 DQ{M(Oxidation (M))|F}EK 2.8147 - 200 + 1 2.408 73749.8 0.550000011920929 321 2669 2991 DOHH2_400M_050219_2,2992 DOHH2_400M_050219_2,2992,QDRDMMEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 2995 13.511 504.0 149710.0 25 0 19450.0 + 9384 FIREKGKSV 9 96 532.3164999630295 1062.618446992859 2 532.3165771365166 MULTI CID FTMS 0 0 0 2994 82398.4453125 0.616896818036337 -9 0.0482645034790039 1 Unmodified _FIREKGKSV_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;ENST00000538136.1_1_2:48011218-48025765:+|nuORF;nc|ENSG00000116062|P52701-2|MSH6 21.53697664764585 0.2571576504437394 2 GKSV 4 5 28.404 0.0 0.0 2.673 0.0 0.0 673.3912220685562 0.0 673.3912220685562 0.0 11.977437731477425 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + GKSV 2.673 + + 83 1 2.408 65727.6 1.0 322 2671 2994 DOHH2_400M_050219_2,2995 DOHH2_400M_050219_2,2995,FIREKGKSV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 2999 13.529 415.0 278000.0 25 0 61822.0 32444 SAEQRNHTLIM 11 75 433.8864772420196 1298.6376023262587 3 434.2206603884697 MULTI CID FTMS 0 0 0 2998 90670.75 0.6644553757087764 -4 0.0233964920043945 1 Unmodified _SAEQRNHTLIM_ ENSG00000196782|ENST00000509479|MAML3 1.214830529360525 0.8694162858786273 2 M 1 10 12.218 0.0 0.0 0.94087 0.0 0.0 1149.5865597010618 0.0 1149.5865597010618 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 0.94087 + + 22 + 1 2.408 94372.9 1.0 323 2674 2998 DOHH2_400M_050219_2,2999 DOHH2_400M_050219_2,2999,SAEQRNHTLIM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3001 13.535 166.0 408620.0 25 0 25198.0 10375 FSPRVNRIL 9 92 367.8893750467364 1100.6462957404092 3 367.8892700076103 MULTI CID FTMS 0 0 0 3000 269740.65625 0.4075022767004202 18 -0.095956802368164 1 Unmodified _FSPRVNRIL_ nc|ENSG00000226746|Q8TEV8|SMCR5 16.942295170755138 0.3780752226737986 2 {I|L}E 2 8 23.711 0.0 0.0 2.1543 0.0 0.0 0.0 855.4939174319487 855.4939174319487 0.7795501485934864 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}E 2.1543 - 35 + 1 2.408 60456.1 1.0 324 2675 3000 DOHH2_400M_050219_2,3001 DOHH2_400M_050219_2,3001,FSPRVNRIL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 3009 13.565 202.0 348290.0 25 0 58782.0 5287 DLAQLFWDIY 10 77 428.5467025841672 0 428.5470458865166 PEAK CID FTMS 0 0 0 3008 109413.1171875 0.9628258691855868 1 -0.006387710571289 1 Unmodified _DLAQLFWDIY_ ENSG00000235118|ENST00000441223|FAM237A 7.945399516374404 0.3903999905773923 2 R 1 10 2.4743 0.0 0.0 0.28936 0.0 0.0 271.803291787672 424.1436352214418 695.9469270091138 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.28936 - 3 + 1 2.408 58672.8 1.0 325 2682 3008 DOHH2_400M_050219_2,3009 DOHH2_400M_050219_2,3009,DLAQLFWDIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3013 13.583 428.0 206950.0 25 0 13084.0 32913 SEKGEKEEK 9 112 532.2674647593769 1062.5203765855538 2 533.2706786990166 MULTI CID FTMS 0 0 0 3012 126392.125 0.0695797142677441 -32 0.2126493453979492 1 Unmodified _SEKGEKEEK_ ENSG00000126653|ENST00000247026|NSRP1 19.256988751693697 0.3154191944385105 2 [VS]AGH[NG]KQ 9 7 49.249 0.0 0.0 4.6351 0.0 0.0 0.0 181.0752831619788 181.0752831619788 32.867085847733165 0.0 0.0 0.0 0 0.0 2.0 0.9802046884880936 0.5 [VS]AGH[NG]KQ 4.6351 - 939 1 2.408 70962.5 1.0 326 2685 3012 DOHH2_400M_050219_2,3013 DOHH2_400M_050219_2,3013,SEKGEKEEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3016 13.592 54.0 656920.0 25 0 32540.0 + 35552 STQMTITTQK 10 74 577.789498246625 1153.56444356005 2 577.7897216677666 MULTI CID FTMS 0 0 0 3015 866190.1875 0.8660184993325073 1 -0.0047883987426757 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 53.31671820480216 0.0606844387689228 2 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 69.94 0.0 0.0 6.063 6.063 86.666 0.0 0.0 0.0 57.17588723988005 15.026975159433531 15.026975159433531 9.164539485499256 0 0.75 0.0 0.3807196863200844 0.6237125054200234 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA 6.063;5.2685;5.2685;4.4772;3.7769;2.9856 +;-;-;-;-;- + 135 + 1 2.408 32359.0 1.0 327 2687 3015 DOHH2_400M_050219_2,3016 DOHH2_400M_050219_2,3016,STQMTITTQK True False STQMTITTQK 13.592313 577.789721667767 21000394.5 3015.0 ENSG00000181143|ENST00000397910|MUC16 9.82720677057902 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3022 13.625 800.0 94143.0 25 0 7050.3 + 619 AEKREHEKEVL 11 113 456.58054758297817 1366.7198133491345 3 456.5799438357353 MULTI CID FTMS 0 0 0 3021 52543.4375 0.6837077520310529 1 -0.0163526535034179 1 Unmodified _AEKREHEKEVL_ ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1 12.928695527124582 0.7662149133114253 2 KEV{I|L} 4 7 33.532 0.0 0.0 2.4535 0.0 0.0 879.4235096662125 0.0 879.4235096662125 0.0 19.133866268328404 0.0 0.0 0 0.5 0.0 0.5 0.0 + KEV{I|L} 2.4535 + + 141 1 2.408 66913.1 0.4099999964237213 328 2692 3021 DOHH2_400M_050219_2,3022 DOHH2_400M_050219_2,3022,AEKREHEKEVL False True AEKREHEKEVL 13.624878 456.579943835735 318925.40625 3021.0 ENST00000465604.1_1_1:26227509-26228203:-|nuORF;;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;;ENSG00000117632|ENST00000455785|STMN1;;nc|ENSG00000117632|P16949-2|STMN1 4.638094266255696 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3024 13.641 800.0 76576.0 25 0 11379.0 + 8199 EPSPSLIQSAN 11 98 571.7877059441247 1141.5608589550493 2 571.7875854372978 MULTI CID FTMS 0 0 0 3023 101571.4296875 0.4163325518070703 23 -0.1933355331420898 1 Unmodified _EPSPSLIQSAN_ REV__ENSG00000156509|ENST00000428847|FBXO43;REV__ENST00000520987.1_1_8:101149771-101157363:-|nuORF 32.037481411007896 0.3399527776090619 2 ESAN 4 -1 45.037 0.0 0.0 3.9452 0.0 0.0 722.3900733278444 0.0 722.3900733278444 0.0 28.047444008242906 0.0 0.0 0 0.9247425010840048 0.0 0.9247425010840048 0.0 ESAN 3.9452 - 211 1 2.408 51257.0 0.5099999904632568 329 2693 3023 DOHH2_400M_050219_2,3024 DOHH2_400M_050219_2,3024,EPSPSLIQSAN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3027 13.662 800.0 155410.0 25 0 20544.0 + 17660 KPTGARPSAL 10 113 499.29299295026783 996.5714329673356 2 499.2926818728447 MULTI CID FTMS 0 0 0 3026 98353.6328125 0.3702249369845662 -10 0.0719871520996093 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 24.881564428377168 0.4096545554397951 2 KPTGNKKQP 9 6 + 44.333 0.0 0.0 4.4485 4.4485 81.28 0.0 0.0 0.0 23.980625354554373 0.227562184969372 0.227562184969372 9.208187539523747 0 0.8494850021680094 0.0 0.3494850021680094 0.25 KPTGNKKQP;KPTGGGKKQP;KPTGNKK[AG]P;{[TV]|[{I|L}S]}[QP][TA]K[RP];[EP][KA][TA]K[RP];{[TV]|[{I|L}S]}[VS][NP]K[RP] 4.4485;3.5245;3.2737;1.5121;1.2436;1.2101 -;-;-;-;-;- 271 + 1 2.408 100470.5 0.4799999892711639 330 2695 3026 DOHH2_400M_050219_2,3027 DOHH2_400M_050219_2,3027,KPTGARPSAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3028 13.675 800.0 97011.0 25 0 3962.7 + 26177 NQESAQKNYN 10 117 598.2703700293944 1194.5261871255886 2 598.2706176638603 MULTI CID FTMS 0 0 0 3026 88934.859375 0.3201368214959247 -12 0.0800704956054687 2 Unmodified _NQESAQKNYN_ REV__ENSG00000152661|ENST00000282561|GJA1 32.78568957990786 0.2337485590374503 2 [AG]D[KS][YN]AQQN 11 -1 + 55.586 0.0 0.0 4.6534 4.6534 77.245 0.0 0.0 0.0 7.077348420045126 -1.6912555345371487 -1.6912555345371487 5.5102999566398125 0 0.7302046884880937 2.0 0.25 1.586696871556164 [AG]D[KS][YN]AQQN;[AG]A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[YN]AQQN;{[QD]|[EN]|[WG]|[KD]|[RS]}[KS][YN]AQQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TP][YN]AQQN;{[QV]|[N{I|L}]|[RA]|[KV]}[YT]DEAQQN;[QA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[YN]AQQN;[WP][WH]EAQQN;{[DA]|[EG]}G[KS][YN]AQQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}CQAQVQQM;[AG]D[{M(Oxidation (M))|F}T]AQVQQM 4.6534;4.1921;3.6334;3.4658;3.3407;3.1091;3.0583;3.0398;2.9317;2.6159 -;-;-;-;-;-;-;-;-;- 1871 1 2.408 62197.5 0.4600000083446502 331 2695 3026 DOHH2_400M_050219_2,3028 DOHH2_400M_050219_2,3028,NQESAQKNYN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3031 13.684 71.0 833920.0 25 0 165880.0 + 31952 RVDPNGSRY 9 55 532.2674647593769 1062.5203765855538 2 532.2678100466728 MULTI CID FTMS 0 0 0 3030 679890.0 0.0677371397669186 -22 0.1506280899047851 1 Unmodified _RVDPNGSRY_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 6.723162845929126 0.6799819581413107 2 Y 1 8 13.979 0.0 0.0 1.3157 0.0 0.0 881.4469645755913 0.0 881.4469645755913 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.3157 + + 5 + 1 2.433 52587.5 1.0 332 2697 3030 DOHH2_400M_050219_2,3031 DOHH2_400M_050219_2,3031,RVDPNGSRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3032 13.698 800.0 136990.0 25 0 18865.0 + 15688 IQRLETMK 8 99 509.7890991093356 1017.5636452854712 2 509.7894470095634 MULTI CID FTMS 0 0 0 3030 67629.6640625 0.106227019069969 -22 0.1506280899047851 2 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 2 TMK 3 -1 45.445 0.0 0.0 4.4661 0.0 0.0 639.369743776216 0.0 639.369743776216 0.0 22.25772496747986 0.0 0.0 0 1.5 0.0 0.4247425010840047 0.0 TMK 4.4661 + + 157 1 2.433 87963.4 0.4600000083446502 333 2697 3030 DOHH2_400M_050219_2,3032 DOHH2_400M_050219_2,3032,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3033 13.712 800.0 41325.0 25 0 11523.0 -1 0 21 1152.441141772459 3454.3015959175773 3 1153.111499011517 MULTI CID FTMS 0 0 0 3030 135468.1875 0.3834640418923157 13 -0.1148033142089843 3 2 G 1 -1 6.9897 0.0 0.0 0.20235 0.0 0.0 2147.755130370253 1246.5036565785977 3394.2587869488507 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20235 - 2 + 1 2.433 37823.1 0.4600000083446502 334 2697 3030 DOHH2_400M_050219_2,3033 DOHH2_400M_050219_2,3033, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3040 13.738 187.0 258740.0 25 0 15729.0 + -1 QDRDMMEK 8 82 542.7214783210633 1083.4284037089265 2 542.7220336794853 MULTI CID FTMS 0 0 0 3039 323920.125 0.904255129825061 -8 0.0865430831909179 1 2 Oxidation (M) _QDRDM(Oxidation (M))M(Oxidation (M))EK_ REV__ENSG00000103335|ENST00000301015|PIEZO1 14.838274106304384 0.6917062315640577 2 DQ{M(Oxidation (M))|F}EK 5 -1 47.747 0.0 0.0 4.4071 0.0 0.0 418.12391259740144 0.0 418.12391259740144 0.0 28.361884269476857 0.0 0.0 0 0.0 0.0 0.6307196863200843 0.8252574989159953 DQ{M(Oxidation (M))|F}EK 4.4071 - 208 + 1 2.433 40698.8 1.0 335 2703 3039 DOHH2_400M_050219_2,3040 DOHH2_400M_050219_2,3040,QDRDMMEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3041 13.752 800.0 69334.0 25 0 15325.0 + 37952 GSDHQSPSSSSY 12 80 619.749405579382 1237.484258225564 2 619.7496215701103 MULTI CID FTMS 0 0 0 3039 65828.4765625 0.4621453631918815 -13 0.1314115524291992 2 Unmodified _TMFICCSPSSY_ ENSG00000169155|ENST00000373464|ZBTB43 29.081581746732265 0.4093582134107448 2 QS[PS]SSSY 8 7 60.513 0.0 0.0 4.89 0.0 0.0 396.1400318830094 0.0 396.1400318830094 0.0 20.29213369186955 0.0 0.0 0 1.305462187404089 0.0 2.25 0.0 QS[PS]SSSY 4.89 - 745 1 2.433 47958.4 0.4300000071525574 336 2703 3039 DOHH2_400M_050219_2,3041 DOHH2_400M_050219_2,3041,TMFICCSPSSY False False GSDHQSPSSSSY 13.751827 619.74962157011 690823.375 3039.0 ENSG00000169155|ENST00000373464|ZBTB43 7.961027304331462 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3046 13.774 432.0 221900.0 25 0 9772.8 + 31748 RRYQKSTEL 9 123 394.2191930982602 1179.6357498949806 3 394.2201110720634 MULTI CID FTMS 0 0 0 3045 128646.984375 0.1926373584104687 -16 0.1592512130737304 1 Unmodified _RRYQKSTEL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 20.453626601364224 0.2830276176381075 2 {M(Oxidation (M))|F}{I|L} 2 8 23.711 0.0 0.0 2.0101 0.0 0.0 901.4883767334396 0.0 901.4883767334396 0.0 11.237125054200234 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L} 2.0101 - 75 1 2.436 79448.5 1.0 337 2707 3045 DOHH2_400M_050219_2,3046 DOHH2_400M_050219_2,3046,RRYQKSTEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3049 13.794 800.0 76163.0 25 0 7461.5 + 45429 YTDHQNSSSY 10 94 601.2412278521334 1200.4679027710667 2 601.2422363162041 MULTI CID FTMS 0 0 0 3048 87489.59375 0.2531191834995123 -16 0.1531038284301757 1 Unmodified _YTDHQNSSSY_ ENSG00000125398|ENST00000245479|SOX9 41.95555342248728 0.1369168616057562 2 [YT][HD]QNSSSY 10 0 + 52.77 0.0 0.0 4.3958 4.3958 80.142 0.0 0.0 0.0 5.169752687851528 38.06479076621045 5.169752687851528 9.164539485499256 0 0.8182503180159344 1.5228787452803376 0.5 0.8494850021680094 + + [YT][HD]QNSSSY;[YT][HD][AG]NSSSY;[YT][HD]QGGSSSY;[HM]SSNQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[CT]|[{M(Oxidation (M))|F}G]};[HD][YT]QNSSSY;[HM]SSN[AG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[CT]|[{M(Oxidation (M))|F}G]};[HM]SSGGQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[CT]|[{M(Oxidation (M))|F}G]};[HD][YT][AG]NSSSY;[HD][YT]QGGSSSY;[HM][C(Carbamidomethyl (C))Q]Q[{M(Oxidation (M))|F}T]SY 4.3958;3.6324;3.6324;3.1129;3.0231;2.3494;2.3494;2.2597;2.2597;1.8824 +;-;-;-;-;-;-;-;-;- + 305 1 2.436 48525.0 0.4699999988079071 338 2709 3048 DOHH2_400M_050219_2,3049 DOHH2_400M_050219_2,3049,YTDHQNSSSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3059 13.839 618.0 248140.0 25 0 62388.0 + -1 MSHIRKPAENT 11 73 433.8865786750961 1298.6379066254883 3 434.2201415896416 MULTI CID FTMS 0 0 0 3058 87351.6640625 0.4342215167948501 -37 0.271249771118164 1 Oxidation (M) _M(Oxidation (M))SHIRKPAENT_ REV__ENSG00000182601|ENST00000331351|HS3ST4 2.6312355333042263 0.8627335947654684 2 P 1 -1 12.218 0.0 0.0 0.94087 0.0 0.0 1183.5741000232406 0.0 1183.5741000232406 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.94087 + + 20 + 1 2.436 126433.7 1.0 339 2718 3058 DOHH2_400M_050219_2,3059 DOHH2_400M_050219_2,3059,MSHIRKPAENT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3060 13.853 800.0 119140.0 25 0 27854.0 7792 ELHPLMKEAL 10 64 590.8250509623257 1179.6355489914513 2 590.8248779177666 MULTI CID FTMS 0 0 0 3058 88011.7578125 0.6926368106958742 -7 0.027688980102539 2 Unmodified _ELHPLMKEAL_ ENSG00000073910|ENST00000542859|FRY 9.38312468134398 0.6832340498775793 2 K 1 9 3.9794 0.0 0.0 0.33734 0.0 0.0 465.2413362002388 583.2757662408811 1048.51710244112 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.33734 + + 10 + 1 2.436 77130.1 0.4799999892711639 340 2718 3058 DOHH2_400M_050219_2,3060 DOHH2_400M_050219_2,3060,ELHPLMKEAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3063 13.864 229.0 250820.0 25 0 44063.0 + 26400 NTDPHSQEY 9 82 545.7252877157656 1089.436022498331 2 545.7254516482353 MULTI CID FTMS 0 0 0 3062 216211.078125 0.0513788168114661 -28 0.2486791610717773 1 Unmodified _NTDPHSQEY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 25.399314129420983 0.2080152500878129 2 Y 1 8 16.99 0.0 0.0 1.5595 0.0 0.0 908.3617712549702 0.0 908.3617712549702 0.0 4.918986326859383 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.5595 + + 109 + 1 2.436 52038.2 1.0 341 2720 3062 DOHH2_400M_050219_2,3063 DOHH2_400M_050219_2,3063,NTDPHSQEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3064 13.878 800.0 99263.0 25 0 15344.0 25889 NLIPVLMFK 9 87 537.8206668868355 1073.626780840471 2 537.8208495974541 MULTI CID FTMS 0 0 0 3062 87335.8203125 0.9330601283316212 -5 0.0429916381835937 2 Unmodified _NLIPVLMFK_ ENSG00000188352|ENST00000338382|FOCAD 10.823927491677226 0.5436922275383211 2 KMT[{I|L}P][WP]K 8 6 25.623 0.0 0.0 2.3865 0.0 0.0 74.07651436237832 0.0 74.07651436237832 0.0 8.627815773883327 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 KMT[{I|L}P][WP]K 2.3865 - 137 + 1 2.436 69159.5 0.5299999713897705 342 2720 3062 DOHH2_400M_050219_2,3064 DOHH2_400M_050219_2,3064,NLIPVLMFK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3065 13.884 353.0 206130.0 25 0 63843.0 33058 SEQLLRGP 8 78 450.2521213424216 0 450.2521240115166 PEAK CID FTMS 0 0 0 3062 81530.2890625 0.672319582079779 -25 0.2119092941284179 3 Unmodified _SEQLLRGP_ ENSG00000204291|ENST00000375001|COL15A1 5.760428011301431 0.5786759180849727 2 E 1 7 3.9794 0.0 0.0 0.4429 0.0 0.0 581.3600948803526 185.05718408756096 766.4172789679135 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.4429 + + 5 + 1 2.436 60744.4 1.0 343 2720 3062 DOHH2_400M_050219_2,3065 DOHH2_400M_050219_2,3065,SEQLLRGP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3071 13.916 800.0 160610.0 25 0 18308.0 + 17588 KPTAAFHLL 9 114 499.29299295026783 996.5714329673356 2 499.2932006716728 MULTI CID FTMS 0 0 0 3070 137436.828125 0.5173427719638841 20 -0.1504278182983398 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 26.88365393820708 0.1891292719743517 2 KPT 3 -1 45.802 0.0 0.0 4.596 0.0 0.0 0.0 667.3538464184844 667.3538464184844 29.666374742795814 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.805462187404089 0.0 KPT 4.596 + + 222 + 1 2.436 100439.1 0.6100000143051147 344 2725 3070 DOHH2_400M_050219_2,3071 DOHH2_400M_050219_2,3071,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3075 13.941 800.0 67765.0 25 0 4417.2 + 35553 STQMTITTQK 10 96 577.789498246625 1153.56444356005 2 577.7894164919853 MULTI CID FTMS 0 0 0 3074 48147.47265625 0.0481379293117639 42 -0.5154056549072266 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 69.33821966488729 0.0189579340102328 2 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 64.176 0.0 0.0 5.5633 5.5633 84.933 0.0 0.0 0.0 51.70169225173152 14.565246582389534 14.565246582389534 9.164539485499262 0 0.6139829889124311 0.0 0.8807196863200843 0.9666152729074456 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}Q{I|L}Y{[DA]|[EG]}TQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA;[NP][HK]{I|L}TE[C(Carbamidomethyl (C))R];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YR]{[QD]|[EN]|[WG]|[KD]|[RS]}Q{[MG]|[TS]} 5.5633;4.7688;4.7688;3.9775;3.283;2.6584;2.4916;0.69566;0.34595 +;-;-;-;-;-;-;-;- + 526 + 1 2.438 45505.0 0.5099999904632568 345 2728 3074 DOHH2_400M_050219_2,3075 DOHH2_400M_050219_2,3075,STQMTITTQK True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3077 13.946 12.0 5053600.0 25 0 1121600.0 + 31953 RVDPNGSRY 9 50 532.2674647593769 1062.5203765855538 2 532.2677490115166 MULTI CID FTMS 0 0 0 3076 4545055.5 0.4528218677314011 10 -0.0502214431762695 1 Unmodified _RVDPNGSRY_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 9.38312468134398 0.5871240394367778 2 [RV]DY 4 5 21.198 0.0 0.0 1.9951 0.0 0.0 0.0 526.2376803033811 526.2376803033811 7.2184874961635614 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [RV]DY 1.9951 - 4 + 1 2.438 53682.2 1.0 346 2729 3076 DOHH2_400M_050219_2,3077 DOHH2_400M_050219_2,3077,RVDPNGSRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3078 13.948 128.0 451960.0 25 0 67921.0 + 15689 IQRLETMK 8 69 509.7890991093356 1017.5636452854712 2 509.7893249392509 MULTI CID FTMS 0 0 0 3076 517529.28125 0.8128917035253256 10 -0.0502214431762695 2 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 2 TMK 3 -1 43.94 0.0 0.0 4.3182 0.0 0.0 639.3690784903525 0.0 639.3690784903525 0.0 20.75257498915996 0.0 0.0 0 1.424742501084005 0.0 0.0 0.3494850021680094 TMK 4.3182 + + 57 + 1 2.438 51154.4 1.0 347 2729 3076 DOHH2_400M_050219_2,3078 DOHH2_400M_050219_2,3078,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3086 13.983 476.0 273470.0 25 0 45231.0 + 43772 YEKNPDSHGY 10 130 403.844027462551 1208.5102529878532 3 403.8438293337822 MULTI CID FTMS 0 0 0 3085 119709.2734375 0.126253413989867 -12 0.0760335922241211 1 Unmodified _YEKNPDSHGY_ ENSG00000147123|ENST00000377811|NDUFB11;nc|ENSG00000147123|Q9NX14-2|NDUFB11 27.628801355627647 0.3479284626772844 2 NPDSHGY 7 3 36.278 0.0 0.0 3.0019 0.0 0.0 420.2007914578008 0.0 420.2007914578008 0.0 15.59764283365892 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 + NPDSHGY 3.0019 + + 709 + 1 2.438 105281.6 1.0 348 2736 3085 DOHH2_400M_050219_2,3086 DOHH2_400M_050219_2,3086,YEKNPDSHGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3091 14.007 530.0 184190.0 25 0 8478.7 + -1 QDRDMMEK 8 117 542.7214783210633 1083.4284037089265 2 542.7219726443291 MULTI CID FTMS 0 0 0 3090 150981.015625 0.4214784675237574 29 -0.4406700134277344 1 2 Oxidation (M) _QDRDM(Oxidation (M))M(Oxidation (M))EK_ REV__ENSG00000103335|ENST00000301015|PIEZO1 11.640296217721598 0.738950129755968 2 DQ{M(Oxidation (M))|F}EK 5 -1 37.008 0.0 0.0 3.4158 0.0 0.0 418.1245353804735 0.0 418.1245353804735 0.0 17.446734458263357 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.6747425010840047 DQ{M(Oxidation (M))|F}EK 3.4158 - 453 + 1 2.438 76619.1 1.0 349 2740 3090 DOHH2_400M_050219_2,3091 DOHH2_400M_050219_2,3091,QDRDMMEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3092 14.021 800.0 152140.0 25 0 11483.0 + 43773 YEKNPDSHGY 10 119 605.2620809376697 1208.5096089421393 2 605.2625610232353 MULTI CID FTMS 0 0 0 3090 108588.09375 0.2611684646891238 -8 0.0389909744262695 2 Unmodified _YEKNPDSHGY_ ENSG00000147123|ENST00000377811|NDUFB11;nc|ENSG00000147123|Q9NX14-2|NDUFB11 107.5634045930896 0.0042230779264997 2 YEKNPDSHGY 10 0 + 116.16 0.0 0.0 9.6116 9.6116 96.091 0.0 0.0 0.0 90.73899222953445 14.753909886649083 14.753909886649083 13.411964496339309 0 2.524227503252014 2.0 1.5044321917401078 0.4247425010840047 + + YEKNPDSHGY;YEKGGPDSHGY;YEKYYSHGY;YEKNY{[WS]|[C(Carbamidomethyl (C)){I|L}]}GY;YEKNPD[{M(Oxidation (M))|F}E][PA];YEKNPD{[QD]|[EN]|[WG]|[KD]|[RS]}[NS];[YE]KNPDSHGY;YEKGGPD{[QD]|[EN]|[WG]|[KD]|[RS]}[NS];YEKGGY{[WS]|[C(Carbamidomethyl (C)){I|L}]}GY;YEKN{[YC]|[HE]}{[{M(Oxidation (M))|F}D]|MM}K 9.6116;8.5018;7.2959;7.0183;6.8606;6.8209;6.2156;6.0626;5.9049;5.7738 +;-;-;-;-;-;+;-;-;- + 1958 + 1 2.438 92236.2 0.5199999809265137 350 2740 3090 DOHH2_400M_050219_2,3092 DOHH2_400M_050219_2,3092,YEKNPDSHGY True True YEKNPDSHGY 14.020927 605.262561023235 7937468.0 3090.0 nc|ENSG00000147123|Q9NX14-2|NDUFB11;;ENSG00000147123|ENST00000377811|NDUFB11 9.999253590901692 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3094 14.026 130.0 406360.0 25 0 28224.0 + 19468 LFFSFLFFL 9 86 394.2191930982602 1179.6357498949806 3 394.2193176150322 MULTI CID FTMS 0 0 0 3093 364491.90625 0.5457940450226446 18 -0.3027238845825195 1 Unmodified _LFFSFLFFL_ REV__ENST00000544777.1_1_12:442481-443474:-|nuORF 11.640296217721598 0.521594087909532 2 {M(Oxidation (M))|F}{I|L} 2 -1 25.217 0.0 0.0 2.1377 0.0 0.0 901.4841915913462 0.0 901.4841915913462 0.0 13.979400086720377 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L} 2.1377 + + 15 1 2.438 45884.7 1.0 351 2741 3093 DOHH2_400M_050219_2,3094 DOHH2_400M_050219_2,3094,LFFSFLFFL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3097 14.047 800.0 125870.0 25 0 12405.0 + 45430 YTDHQNSSSY 10 124 601.2412278521334 1200.4679027710667 2 601.2410766482353 MULTI CID FTMS 0 0 0 3096 168820.234375 0.4884196857205808 18 -0.309478759765625 1 Unmodified _YTDHQNSSSY_ ENSG00000125398|ENST00000245479|SOX9 86.33184430468982 0.0118786207050641 2 [YT][HD]QNSSSY 10 0 + 79.79 0.0 0.0 6.6466 6.6466 79.43 0.0 0.0 0.0 1.0720996964786875 14.146518864155126 1.0720996964786875 1.0720996964786875 0 1.1861818737241734 1.5228787452803376 1.9049471895720984 0.3807196863200844 + + [YT][HD]QNSSSY;[HD]TYQNSSSY;[HD]Q[YT]NSSSY;[YT][HD]QGGSSSY;[YT][HD][AG]NSSSY;[HD]TY[AG]NSSSY;[HD]TYQGGSSSY;{[QD]|[EN]|[WG]|[KD]|[RS]}H[YT]NSSSY;[HD]Q[YT]GGSSSY;[HS]EYQNSSSY 6.6466;6.5573;6.3937;5.8832;5.8832;5.7939;5.7939;5.7722;5.6303;5.5395 +;-;-;-;-;-;-;-;-;- + 2324 1 2.438 76407.2 0.6299999952316284 352 2743 3096 DOHH2_400M_050219_2,3097 DOHH2_400M_050219_2,3097,YTDHQNSSSY True True YTDHQNSSSY 14.046521 601.241076648235 4052415.5 3096.0 ENSG00000125398|ENST00000245479|SOX9 10.011404514312744 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3100 14.067 800.0 235980.0 25 0 20083.0 + 40761 VLKEKRSL 8 103 486.8136470912348 971.6127412492696 2 486.8132202029228 MULTI CID FTMS 0 0 0 3099 176232.21875 0.4580943529138065 -6 0.0593738555908203 1 Unmodified _VLKEKRSL_ ENSG00000137814|ENST00000260372|HAUS2;nc|ENSG00000137814|Q9NVX0-2|HAUS2;nc|ENSG00000137814|Q9NVX0-3|HAUS2 32.78568957990786 0.3549862272178655 2 V{I|L}KEK 5 3 68.232 0.0 0.0 7.0225 0.0 0.0 0.0 371.2041414850219 371.2041414850219 43.26606256887672 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.3807196863200844 0.4247425010840047 + V{I|L}KEK 7.0225 + + 249 + 1 2.438 148893.9 0.7200000286102295 353 2745 3099 DOHH2_400M_050219_2,3100 DOHH2_400M_050219_2,3100,VLKEKRSL False True VLKEKRSL 14.066911 486.813220202923 1478421.25 3099.0 ENSG00000137814|ENST00000260372|HAUS2;;nc|ENSG00000137814|Q9NVX0-2|HAUS2;;nc|ENSG00000137814|Q9NVX0-3|HAUS2 -0.1476558844248453 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3101 14.081 800.0 136180.0 25 0 20602.0 + 45290 YSDRSSGGSY 10 126 539.7253750827973 1077.4361972323943 2 539.7256347537041 MULTI CID FTMS 0 0 0 3099 82776.5234375 0.2958984336818446 -5 0.055333137512207 2 Unmodified _YSDRSSGGSY_ ENSG00000099622|ENST00000587896|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000591097.5_1_19:1271671-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-2|CIRBP;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011|CIRBP 48.07275321834293 0.0914622731454193 2 YSC(Carbamidomethyl (C))AG[RD]S 8 7 61.058 0.0 0.0 5.667 0.0 0.0 0.0 178.05132471256096 178.05132471256096 46.523170599664034 0.0 0.0 0.0 0 1.3807196863200843 1.5228787452803376 1.66944517631652 0.0 YSC(Carbamidomethyl (C))AG[RD]S 5.667 - 1999 + 1 2.438 85643.0 0.5 354 2745 3099 DOHH2_400M_050219_2,3101 DOHH2_400M_050219_2,3101,YSDRSSGGSY True True YSDRSSGGSY 14.080742 539.725634753704 1261043.125 3099.0 ENST00000591097.5_1_19:1271671-1272439:+|nuORF;;ENSG00000099622|ENST00000587896|CIRBP;;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;;ENST00000591055.5_1_19:1271297-1272439:+|nuORF;;nc|ENSG00000099622|Q14011-3|CIRBP;;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;;nc|ENSG00000099622|Q14011|CIRBP;;nc|ENSG00000099622|Q14011-2|CIRBP;;ENST00000593128.5_1_19:1271297-1272439:+|nuORF 9.937559445699057 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3104 14.092 227.0 230220.0 25 0 13240.0 10992 GASDTLTGQA 10 90 460.7196037433061 919.4246545534122 2 460.7193481326103 MULTI CID FTMS 0 0 0 3103 233022.046875 0.204291375993607 -8 0.0936050415039062 1 Unmodified _GASDTLTGQA_ ENST00000468892.5_1_3:183910449-183911483:+|nuORF 15.847184025352805 0.5816416552707754 2 SNS{I|L}[DP] 6 8 19.486 0.0 0.0 2.1194 0.0 0.0 288.14328473301674 0.0 288.14328473301674 0.0 2.8034914120252097 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 SNS{I|L}[DP] 2.1194 - 136 + 1 2.438 44875.7 1.0 355 2747 3103 DOHH2_400M_050219_2,3104 DOHH2_400M_050219_2,3104,GASDTLTGQA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3105 14.106 800.0 177830.0 25 0 24136.0 + 32834 SEGNGSHTI 9 148 451.2048570588464 900.3951611844927 2 451.2047302126884 MULTI CID FTMS 0 0 0 3103 77899.1640625 0.7267386756351597 -1 0.004012107849121 2 Unmodified _SEGNGSHTI_ ENSG00000197157|ENST00000354725|SND1 37.97399986684836 0.0865783450051559 2 {[MG]|[TS]}[YV]C{I|L}{[ES]|[DT]|[{I|L}C]} 8 7 + 21.246 0.0 0.0 2.3596 2.3596 73.645 0.0 0.0 0.0 6.239184657840315 -7.184859246260714 -7.184859246260714 8.044374238089596 0 0.25 0.0 0.6861818737241735 0.0 {[MG]|[TS]}[YV]C{I|L}{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}[WE]HT{I|L};{[ES]|[DT]|[{I|L}C]}GN[SG]HT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}C[{M(Oxidation (M))|F}V]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[YE]GW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}C[W{M(Oxidation (M))|F}]V;{[ES]|[DT]|[{I|L}C]}GN{[DS]|[MA]|[CV]|TT}[RH];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[YE]{I|L}{[ES]|[DT]|[{I|L}C]};{[CT]|[{M(Oxidation (M))|F}G]}[WY]{I|L}{[ES]|[DT]|[{I|L}C]} 2.3596;1.4662;1.3626;1.2965;0.77737;0.70978;0.482;0.36654;0.13984 -;-;+;-;-;-;-;-;- + 243 1 2.438 111824.0 0.5199999809265137 356 2747 3103 DOHH2_400M_050219_2,3105 DOHH2_400M_050219_2,3105,SEGNGSHTI True True SEGNGSHTI 14.106252 451.204730212688 762314.6875 3103.0 ENSG00000197157|ENST00000354725|SND1 2.290320853392283 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3108 14.115 14.0 2942300.0 25 0 211530.0 + 26401 NTDPHSQEY 9 77 545.7252877157656 1089.436022498331 2 545.7255737185478 MULTI CID FTMS 0 0 0 3107 4065865.5 0.9661824940523512 1 -0.0237970352172851 1 Unmodified _NTDPHSQEY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 25.399314129420983 0.2080152500878129 2 {[QS]|[NT]}EHPY 6 5 35.331 0.0 0.0 3.2431 0.0 0.0 0.0 345.11065568005034 345.11065568005034 15.867261009623434 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.2614393726401688 0.6139829889124311 {[QS]|[NT]}EHPY 3.2431 - 289 1 2.438 39928.9 1.0 357 2749 3107 DOHH2_400M_050219_2,3108 DOHH2_400M_050219_2,3108,NTDPHSQEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3109 14.12 281.0 253310.0 25 0 69676.0 + 35294 SSPHCLSVGH 10 88 512.2382791285235 1022.4620053238468 2 512.2379028201103 MULTI CID FTMS 0 0 0 3107 215787.234375 0.3266519449514255 -6 0.0801267623901367 2 Unmodified _SSPHCLSVGH_ REV__ENST00000431657.5_1_3:44409097-44442080:+|nuORF 6.2057823575117 0.6979311171683138 2 Y 1 -1 12.218 0.0 0.0 1.195 0.0 0.0 841.3877083041187 0.0 841.3877083041187 0.0 0.2287874528033739 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.195 - 28 + 1 2.438 59973.4 1.0 358 2749 3107 DOHH2_400M_050219_2,3109 DOHH2_400M_050219_2,3109,SSPHCLSVGH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3110 14.134 800.0 77079.0 25 0 3978.8 + 45440 YTDTHDNTRY 10 85 643.2739615903303 1284.5333702474604 2 643.2746459841728 MULTI CID FTMS 0 0 0 3107 107324.140625 1.0 0 0.0 3 Unmodified _YTDTHDNTRY_ ENSG00000185920|ENST00000331920|PTCH1;ENST00000375290.6_3_9:98215758-98232201:-|nuORF;nc|ENSG00000185920|Q13635-2|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-4|PTCH1 30.7034409873982 0.2788461460996952 2 YTDTHD 6 4 72.964 0.0 0.0 5.6802 0.0 0.0 0.0 549.2458758623748 549.2458758623748 53.2711470149615 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 + YTDTHD 5.6802 + + 118 + 1 2.438 51478.1 0.5299999713897705 359 2749 3107 DOHH2_400M_050219_2,3110 DOHH2_400M_050219_2,3110,YTDTHDNTRY False True YTDTHDNTRY 14.134075 643.274645984173 1350428.59375 3107.0 ENST00000375290.6_3_9:98215758-98232201:-|nuORF;;nc|ENSG00000185920|Q13635-2|PTCH1;;nc|ENSG00000185920|Q13635-3|PTCH1;;nc|ENSG00000185920|Q13635-4|PTCH1;;ENSG00000185920|ENST00000331920|PTCH1 6.77798064549764 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3113 14.144 181.0 610020.0 25 0 75668.0 + 45441 YTDTHDNTRY 10 93 429.1862524654717 1284.5369279966153 3 429.1862060427666 MULTI CID FTMS 0 0 0 3112 147250.5625 0.6712569908684041 -2 0.0276412963867187 1 Unmodified _YTDTHDNTRY_ ENSG00000185920|ENST00000331920|PTCH1;ENST00000375290.6_3_9:98215758-98232201:-|nuORF;nc|ENSG00000185920|Q13635-2|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-4|PTCH1 16.565877749689598 0.5695826726197942 2 YTDTHD 6 4 62.384 0.0 0.0 4.8565 0.0 0.0 0.0 549.2427879063949 549.2427879063949 55.39381281052492 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.4247425010840047 0.0 + YTDTHD 4.8565 + + 152 + 1 2.438 91801.8 1.0 360 2751 3112 DOHH2_400M_050219_2,3113 DOHH2_400M_050219_2,3113,YTDTHDNTRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3114 14.158 800.0 87142.0 25 0 18936.0 5236 DKAFLWEKRYY 11 93 506.9298872238704 1517.7678322718111 3 506.9297973513603 MULTI CID FTMS 0 0 0 3112 54271.84765625 0.6525849820268491 1 -0.0392074584960937 2 Unmodified _DKAFLWEKRYY_ ENSG00000011405|ENST00000691414|PIK3C2A 6.623454094837244 0.8438980474264925 2 GKD[TP]{[DA]|[EG]}NK 9 9 46.608 0.0 0.0 3.0708 0.0 0.0 573.2880481915362 0.0 573.2880481915362 0.0 32.35531242661757 0.0 0.0 0 1.2614393726401687 0.0 0.6307196863200843 0.9604093769761876 GKD[TP]{[DA]|[EG]}NK 3.0708 - 432 + 1 2.438 60299.9 0.5099999904632568 361 2751 3112 DOHH2_400M_050219_2,3114 DOHH2_400M_050219_2,3114,DKAFLWEKRYY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3115 14.163 302.0 571300.0 25 0 54203.0 + 34716 SPYERKRL 8 116 350.2013686964564 1047.5822766895692 3 350.5356628298759 MULTI CID FTMS 0 0 0 3112 147845.265625 0.5053949368300195 -3 0.031656265258789 3 Unmodified _SPYERKRL_ ENSG00000092470|ENST00000263795|WDR76 39.957323273325 0.2350051964751539 2 SPY{[RE]|[WV]}[K{I|L}]R 8 2 + 61.75 0.0 0.0 5.8946 5.8946 90.618 0.0 0.0 0.0 27.716977436784163 4.455547018128669 4.455547018128669 19.7847001269134 0 0.8851518780601922 2.0 0.3807196863200844 1.174742501084005 SPY{[RE]|[WV]}[K{I|L}]R;S{I|L}{M(Oxidation (M))|F}{I|L}[DG][K{I|L}]R;S{I|L}{M(Oxidation (M))|F}{I|L}KKA{[QN]|[E{I|L}]|[KN]};S{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}[K{I|L}]R;{I|L}S{M(Oxidation (M))|F}{I|L}[DG][K{I|L}]R;{I|L}S{M(Oxidation (M))|F}{I|L}KKA{[QN]|[E{I|L}]|[KN]};{I|L}S{M(Oxidation (M))|F}{[RE]|[WV]}[K{I|L}]R;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AKKQDKA 5.8946;4.006;3.5798;3.3876;2.9971;2.571;2.3788;1.7899 -;-;-;-;-;-;-;- 218 + 1 2.438 146567.8 1.0 362 2751 3112 DOHH2_400M_050219_2,3115 DOHH2_400M_050219_2,3115,SPYERKRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3116 14.177 800.0 22472.0 25 0 880.86 -1 0 47 916.6800814154168 2747.01841484645 3 917.3479492068292 MULTI CID FTMS 0 0 0 3112 100297.0390625 0.8283863495212976 -3 0.031656265258789 4 2 DDS 3 -1 27.447 0.0 0.0 0.99917 0.0 0.0 0.0 2426.909319958031 2426.909319958031 11.760912590556812 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 DDS 0.99917 - 18 1 2.438 22768.7 0.4600000083446502 363 2751 3112 DOHH2_400M_050219_2,3116 DOHH2_400M_050219_2,3116, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3119 14.198 800.0 155650.0 25 0 35684.0 19740 LGPQERVHI 9 87 524.7981648332287 1047.5817767332574 2 524.7981445193291 MULTI CID FTMS 0 0 0 3118 114091.96875 0.9474746105084776 -1 0.0040321350097656 1 Unmodified _LGPQERVHI_ ENSG00000179981|ENST00000580243|TSHZ1;nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1 8.745405648335112 0.6093864874670651 2 {I|L}[PG]N 4 6 20.005 0.0 0.0 1.9096 0.0 0.0 0.0 663.3585909479124 663.3585909479124 1.9229469219067816 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {I|L}[PG]N 1.9096 - 88 + 1 2.437 101405.8 0.5099999904632568 364 2753 3118 DOHH2_400M_050219_2,3119 DOHH2_400M_050219_2,3119,LGPQERVHI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3120 14.208 581.0 182420.0 25 0 15186.0 + 32795 SEERHLKEY 9 146 397.5315357819708 1189.5727779461124 3 397.5309631228447 MULTI CID FTMS 0 0 0 3118 97814.2109375 0.4802341461064585 -1 0.0040321350097656 2 Unmodified _SEERHLKEY_ ENSG00000126970|ENST00000374839|ZC4H2;ENST00000488608.5_1_X:64139959-64196305:-|nuORF;ENST00000492653.5_1_X:64139109-64196305:-|nuORF;nc|ENSG00000126970|Q9NQZ6-2|ZC4H2;nc|ENSG00000126970|Q9NQZ6-3|ZC4H2;nc|ENSG00000126970|Q9NQZ6-4|ZC4H2;nc|ENSG00000126970|Q9NQZ6-5|ZC4H2 30.43146612281011 0.143988730116972 2 Y{M(Oxidation (M))|F}SEKR[TP]Y 9 7 + 62.005 0.0 0.0 5.2124 5.2124 75.03 0.0 0.0 0.0 16.478174818886373 9.827796776480469 9.827796776480469 1.7609125905568137 0 0.8807196863200843 0.0 0.7614393726401688 0.0 Y{M(Oxidation (M))|F}SEKR[TP]Y;Y{M(Oxidation (M))|F}SKER[TP]Y;YAYEKR[TP]Y;YAYKER[TP]Y;Y{M(Oxidation (M))|F}SEK[VG][TP]Y;Y{M(Oxidation (M))|F}SERK[TP]Y;Y{M(Oxidation (M))|F}SEKRV{[{M(Oxidation (M))|F}D]|MM};Y{M(Oxidation (M))|F}KSER[TP]Y;Y{M(Oxidation (M))|F}SKE[VG][TP]Y;Y{M(Oxidation (M))|F}SKERV{[{M(Oxidation (M))|F}D]|MM} 5.2124;5.0643;4.8113;4.6633;4.4383;4.4102;4.3862;4.3647;4.2903;4.2382 -;-;-;-;-;-;-;-;-;- 1463 + 1 2.437 87395.5 1.0 365 2753 3118 DOHH2_400M_050219_2,3120 DOHH2_400M_050219_2,3120,SEERHLKEY False True SEERHLKEY 14.207693 397.530963122845 562131.6875 3118.0 nc|ENSG00000126970|Q9NQZ6-5|ZC4H2;;ENSG00000126970|ENST00000374839|ZC4H2;;nc|ENSG00000126970|Q9NQZ6-4|ZC4H2;;ENST00000492653.5_1_X:64139109-64196305:-|nuORF;;ENST00000488608.5_1_X:64139959-64196305:-|nuORF;;nc|ENSG00000126970|Q9NQZ6-3|ZC4H2;;nc|ENSG00000126970|Q9NQZ6-2|ZC4H2 5.535167853037517 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3121 14.216 453.0 198330.0 25 0 9440.4 + 7087 EELRDKRAY 9 132 393.8752807679414 0 393.8752319216728 PEAK CID FTMS 0 0 0 3118 85696.4140625 0.9116501136992348 -1 0.0040321350097656 3 Unmodified _EELRDKRAY_ ENSG00000129347|ENST00000312962|KRI1;ENST00000536689.5_1_19:10664629-10668377:-|nuORF;ENST00000537363.5_1_19:10664629-10670250:-|nuORF 13.51866281300042 0.2719089254562534 2 C 1 9 5.4846 0.0 0.0 0.69801 0.0 0.0 392.5474232528765 287.15647302799067 679.7038962808672 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.69801 - 11 + 1 2.437 71837.6 1.0 366 2753 3118 DOHH2_400M_050219_2,3121 DOHH2_400M_050219_2,3121,EELRDKRAY False True EELRDKRAY 14.21572 393.875231921673 393372.09375 3118.0 ENST00000537363.5_1_19:10664629-10670250:-|nuORF;;ENST00000536689.5_1_19:10664629-10668377:-|nuORF;;ENSG00000129347|ENST00000312962|KRI1 3.3401248455047607 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3123 14.223 265.0 301800.0 25 0 53108.0 39625 VDRHNLYF 8 70 532.2674647593769 1062.5203765855538 2 532.2684814333916 MULTI CID FTMS 0 0 0 3122 232652.640625 0.0231790796086989 35 -0.494546890258789 1 Unmodified _VDRHNLYF_ ENSG00000196187|ENST00000366835|TMEM63A 19.438996006549623 0.6237395211498085 2 {M(Oxidation (M))|F} 1 7 13.099 0.0 0.0 1.2328 0.0 0.0 897.4411204593804 0.0 897.4411204593804 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.2328 + + 19 + 1 2.437 72164.7 1.0 367 2754 3122 DOHH2_400M_050219_2,3123 DOHH2_400M_050219_2,3123,VDRHNLYF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3124 14.229 313.0 286020.0 25 0 25253.0 + 12428 GTSPPSVEK 9 117 451.23485401698576 900.4551551007715 2 451.2344543337822 MULTI CID FTMS 0 0 0 3122 122904.1328125 0.0972261288313638 -17 0.2326068878173828 2 Unmodified _GTSPPSVEK_ ENSG00000181143|ENST00000397910|MUC16 29.84058131909904 0.1515068451768857 2 {[SA]|[TG]}SPP[VS]EK 9 0 + 41.453 0.0 0.0 4.6036 4.6036 84.147 0.0 0.0 0.0 28.23121868067991 1.0912502245689524 1.0912502245689524 13.3610459224166 0 0.3054621874040891 1.6989700043360187 0.7887254899964358 0.1237125054200235 + + {[SA]|[TG]}SPP[VS]EK;{[SA]|[TG]}SPP[QT][{I|L}T];{[SA]|[TG]}HH{I|L}S[H{I|L}];[PS]{NN|[MP]|[D{I|L}]|[EV]}P[KS]{[SA]|[TG]};{[SA]|[TG]}V[PS]{[QD]|[EN]|[WG]|[KD]|[RS]}VV;[PS]TGV{[QD]|[EN]|[WG]|[KD]|[RS]}VV 4.6036;3.1198;2.2441;0.73449;0.34403;0.21939 +;-;-;-;-;- + 410 + 1 2.437 76708.0 1.0 368 2754 3122 DOHH2_400M_050219_2,3124 DOHH2_400M_050219_2,3124,GTSPPSVEK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3125 14.237 430.0 216500.0 25 0 47363.0 + -1 SGHTRPSSL 9 100 471.2407891681455 470.2335127015455 1 471.2433044314384 MULTI CID FTMS 0 0 0 3122 116635.1484375 0.9316975002499414 -1 0.0345621109008789 3 ENSG00000086015|ENST00000361297|MAST2 2 SP 2 -1 13.9 0.0 0.0 2.956 0.0 0.0 268.13792967107514 0.0 268.13792967107514 0.0 1.425974543181976 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 SP 2.956 - 64 + 1 2.437 80898.4 1.0 369 2754 3122 DOHH2_400M_050219_2,3125 DOHH2_400M_050219_2,3125, False False SGHTRPSSL 14.236522 471.243304431438 454114.8125 3122.0 ENSG00000086015|ENST00000361297|MAST2 5.238874276479085 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3127 14.244 266.0 472550.0 25 0 107540.0 16557 KCHQQQLQRM 10 59 433.8865786750961 1298.6379066254883 3 434.2199584841728 MULTI CID FTMS 0 0 0 3126 201168.4375 1.0 0 0.0 1 Unmodified _KCHQQQLQRM_ ENSG00000068745|ENST00000328631|IP6K2 1.7422754331352035 0.7185774482633845 2 T 1 10 12.811 0.0 0.0 0.9865 0.0 0.0 1179.578731065721 0.0 1179.578731065721 0.0 0.8213736144687633 0.0 0.0 0 0.0 0.0 0.2215141619232908 0.0 T 0.9865 - 14 + 1 2.437 104155.7 1.0 370 2755 3126 DOHH2_400M_050219_2,3127 DOHH2_400M_050219_2,3127,KCHQQQLQRM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3128 14.253 514.0 165100.0 25 0 18899.0 + -1 RILANEMK 8 109 495.7737913718597 989.5330298105196 2 495.7740661501884 MULTI CID FTMS 0 0 0 3126 123755.84375 0.8742669253726993 -2 0.0553741455078125 2 Oxidation (M) _RILANEM(Oxidation (M))K_ REV__CON__P07224 20.453626601364224 0.6087503291685402 2 KTT[HK]TTG 8 -1 47.428 0.0 0.0 4.793 0.0 0.0 63.99805341016856 68.05133997134999 132.04939338151854 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 1.6989700043360187 0.0 KTT[HK]TTG 4.793 - 499 + 1 2.437 70168.6 1.0 371 2755 3126 DOHH2_400M_050219_2,3128 DOHH2_400M_050219_2,3128,RILANEMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3129 14.264 622.0 176510.0 25 0 15552.0 + 2708 ATESSNQEY 9 122 514.7118377988918 1027.4091226645835 2 514.7122680544853 MULTI CID FTMS 0 0 0 3126 165629.453125 0.2950925151406228 -24 0.2841482162475586 3 Unmodified _ATESSNQEY_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 64.23631603340823 0.0237365939569086 2 [TA]ES[NS]QEY 9 0 + 36.734 0.0 0.0 3.5754 3.5754 78.974 0.0 0.0 0.0 9.004377006349461 19.656134043664515 9.004377006349461 9.208187539523756 0 0.3935078169319297 1.2218487496163564 1.841129063296272 0.3807196863200844 + + [TA]ES[NS]QEY;[TA]ES[NS][AG]EY;[PG]ESS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EY;GGQSSE[TA]EY;{[QN]|[E{I|L}]|[KN]}E{[MS]|[{M(Oxidation (M))|F}A]}QEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{[MS]|[{M(Oxidation (M))|F}A]}QEY;{[QN]|[E{I|L}]|[KN]}SSE[TA]EY;[Y{M(Oxidation (M))|F}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{M(Oxidation (M))|F}Y;{[ET]|[MV]}AS[NS]QEY;GGQE{[CA]|SS}[TA]EY 3.5754;2.6792;2.6021;2.1704;2.1442;1.9686;1.9253;1.9141;1.8853;1.7007 +;-;-;-;-;-;-;-;-;- + 906 1 2.437 87544.0 1.0 372 2755 3126 DOHH2_400M_050219_2,3129 DOHH2_400M_050219_2,3129,ATESSNQEY True True ATESSNQEY 14.263899 514.712268054485 4285751.0 3126.0 nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;nc|ENSG00000072571|O75330-4|HMMR;;ENSG00000072571|ENST00000393915|HMMR 6.721128940582275 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3130 14.278 800.0 183980.0 25 0 28649.0 + 7613 EIRDKKTGL 9 114 530.3114749645216 1058.6083969958431 2 530.3116943240166 MULTI CID FTMS 0 0 0 3126 129844.828125 0.8758364115583308 1 -0.0412187576293945 4 Unmodified _EIRDKKTGL_ ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-2|RAD50;nc|ENSG00000113522|Q92878-3|RAD50 46.0223103267499 0.0490911897871712 2 DKKTG{I|L} 6 3 53.624 0.0 0.0 5.0656 0.0 0.0 398.2274952619157 0.0 398.2274952619157 0.0 39.43869665344469 0.0 0.0 0 1.5911290632962718 0.0 0.8494850021680094 0.0 + DKKTG{I|L} 5.0656 + + 466 1 2.437 119050.4 0.5699999928474426 373 2755 3126 DOHH2_400M_050219_2,3130 DOHH2_400M_050219_2,3130,EIRDKKTGL True True EIRDKKTGL 14.27773 530.311694324017 558754.3125 3126.0 nc|ENSG00000113522|Q92878-2|RAD50;;nc|ENSG00000113522|Q92878-3|RAD50;;ENSG00000113522|ENST00000378823|RAD50 6.050866762797038 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3132 14.294 800.0 65218.0 25 0 11466.0 + 43775 YEKNPDSHGY 10 68 605.2619753647775 0 605.2607910037041 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _YEKNPDSHGY_ ENSG00000147123|ENST00000377811|NDUFB11;nc|ENSG00000147123|Q9NX14-2|NDUFB11 14.40537977576856 0.3413947114044073 2 KN 2 8 19.024 0.0 0.0 1.5741 0.0 0.0 292.1058466262362 671.244131887584 963.34997851382 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + KN 1.5741 + + 51 + 1 2.437 43829.0 0.449999988079071 374 2756 3131 DOHH2_400M_050219_2,3132 DOHH2_400M_050219_2,3132,YEKNPDSHGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3133 14.297 146.0 547220.0 25 0 44002.0 + 6661 EAYDRRLAH 9 97 377.52767853895926 1129.5612062170778 3 377.5277587771416 MULTI CID FTMS 0 0 0 3131 195375.25 0.2241816859000585 -8 0.1714887619018554 2 Unmodified _EAYDRRLAH_ ENSG00000104738|ENST00000649973|MCM4 24.020572477871973 0.2255576514309169 2 EA{[YD]|[{M(Oxidation (M))|F}M]}H 5 4 33.768 0.0 0.0 2.9894 0.0 0.0 0.0 511.31097743300273 511.31097743300273 14.91598831541907 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 EA{[YD]|[{M(Oxidation (M))|F}M]}H 2.9894 - 50 + 1 2.437 66915.9 1.0 375 2756 3131 DOHH2_400M_050219_2,3133 DOHH2_400M_050219_2,3133,EAYDRRLAH False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3136 14.31 342.0 149980.0 25 0 22049.0 + 32538 SAMVRSEA 8 92 425.7079226380562 849.4012923429124 2 425.7080261111259 MULTI CID FTMS 0 0 0 3135 124916.4296875 0.1090533400067702 -13 0.2505140304565429 1 Unmodified _SAMVRSEA_ ENSG00000198843|ENST00000471696|SELENOT;ENST00000471696.5_2_3:150321089-150340178:+|nuORF;ENST00000485923.1_1_3:150321131-150321287:+|nuORF 29.081581746732265 0.4323690340403521 2 {[SA]|[TG]}MV 4 4 41.312 0.0 0.0 4.8637 0.0 0.0 0.0 458.200306012667 458.200306012667 29.529544691716563 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 + {[SA]|[TG]}MV 4.8637 + + 61 + 1 2.437 47644.0 1.0 376 2758 3135 DOHH2_400M_050219_2,3136 DOHH2_400M_050219_2,3136,SAMVRSEA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3137 14.324 800.0 135050.0 25 0 26047.0 + 6662 EAYDRRLAH 9 75 565.7881212970536 0 565.7881347537041 PEAK CID FTMS 0 0 0 3135 95188.1015625 0.4401978204131417 -8 0.1669960021972656 2 Unmodified _EAYDRRLAH_ ENSG00000104738|ENST00000649973|MCM4 19.256988751693697 0.2078072434435185 2 H 1 8 6.9897 0.0 0.0 0.6188 0.0 0.0 478.16868599285743 511.310927848767 989.4796138416244 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 0.6188 + + 4 + 1 2.437 85342.9 0.5299999713897705 377 2758 3135 DOHH2_400M_050219_2,3137 DOHH2_400M_050219_2,3137,EAYDRRLAH False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3140 14.333 120.0 616210.0 25 0 86184.0 + -1 IQRLETMK 8 80 517.7862136552536 1033.5578743773071 2 517.7868530154228 MULTI CID FTMS 0 0 0 3139 519095.8125 0.0031803749499321 -31 0.3867082595825195 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 2 KTT[{I|L}P][WP]K 8 -1 53.126 0.0 0.0 5.1401 0.0 0.0 63.99693786141104 0.0 63.99693786141104 0.0 34.542717388455046 0.0 0.0 0 1.6861818737241734 0.0 1.274227503252014 0.2887254899964357 KTT[{I|L}P][WP]K 5.1401 - 128 + 1 2.437 61270.7 1.0 378 2760 3139 DOHH2_400M_050219_2,3140 DOHH2_400M_050219_2,3140,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3141 14.34 386.0 239240.0 25 0 40497.0 25653 NFVSFCQPHRQ 11 92 454.8824650012196 1361.6255656038588 3 454.8824035525322 MULTI CID FTMS 0 0 0 3139 180222.40625 1.0 0 0.0 2 Unmodified _NFVSFCQPHRQ_ ENST00000448183.6_1_6:11200558-11306280:-|nuORF 6.623454094837244 0.8438980474264925 2 {[RE]|[WV]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 9 {[RE]|[WV]}HQ + + 51.675 9.052 1.645 3.7951 3.7951 51.06 0.0 0.0 0.0 0.0 40.24858474643892 0.0 0.0 0 1.424742501084005 0.0 0.3494850021680094 0.7302046884880937 {[RE]|[WV]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 3.7951 - 349 + 1 2.437 77435.4 1.0 379 2760 3139 DOHH2_400M_050219_2,3141 DOHH2_400M_050219_2,3141,NFVSFCQPHRQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3143 14.346 107.0 294640.0 25 0 20536.0 10993 GASDTLTGQA 10 53 460.7196037433061 919.4246545534122 2 460.7195312380791 MULTI CID FTMS 0 0 0 3142 399453.125 0.3502021789164508 6 -0.0826168060302734 1 Unmodified _GASDTLTGQA_ ENST00000468892.5_1_3:183910449-183911483:+|nuORF 10.823927491677226 0.6659270209832991 2 SNS{I|L}[DP] 6 8 20.903 0.0 0.0 2.2735 0.0 0.0 288.1423802387622 0.0 288.1423802387622 0.0 2.971062485323511 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SNS{I|L}[DP] 2.2735 - 114 + 1 2.44 31620.7 1.0 380 2761 3142 DOHH2_400M_050219_2,3143 DOHH2_400M_050219_2,3143,GASDTLTGQA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3144 14.348 125.0 417490.0 25 0 54397.0 + 839 AETGSGKTL 9 78 432.22687298897495 862.4391930447499 2 432.2266418337822 MULTI CID FTMS 0 0 0 3142 247044.296875 0.995938411044972 -4 0.0425872802734375 2 Unmodified _AETGSGKTL_ ENSG00000089737|ENST00000621632|DDX24;ENSG00000182810|ENST00000332395|DDX28;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 20.41453444215458 0.284085796332423 2 {[CP]|[EA]}TG 4 5 13.288 0.0 0.0 1.5408 0.0 0.0 0.0 501.2687777154906 501.2687777154906 2.179250024847267 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {[CP]|[EA]}TG 1.5408 + + 42 + 1 2.44 46719.9 1.0 381 2761 3142 DOHH2_400M_050219_2,3144 DOHH2_400M_050219_2,3144,AETGSGKTL False True AETGSGKTL 14.348325 432.226641833782 1689169.25 3142.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;;ENSG00000089737|ENST00000621632|DDX24;;ENSG00000182810|ENST00000332395|DDX28 4.303895791371663 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3145 14.356 452.0 267950.0 25 0 62279.0 + 28305 PRRPPPPPP 9 99 505.7985236524376 1009.5824943716752 2 505.7983276247978 MULTI CID FTMS 0 0 0 3142 191936.390625 0.3095585967267845 -30 0.3872451782226562 3 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 57.47134341890925 0.0274820932774257 2 PR[YK]PPP 7 4 47.484 0.0 0.0 4.7033 0.0 0.0 156.10150344062657 0.0 156.10150344062657 0.0 27.333654194535697 0.0 0.0 0 1.6989700043360187 0.0 0.0 0.805462187404089 PR[YK]PPP 4.7033 - 180 1 2.44 98609.3 1.0 382 2761 3142 DOHH2_400M_050219_2,3145 DOHH2_400M_050219_2,3145,PRRPPPPPP True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3149 14.381 800.0 161570.0 25 0 12882.0 + 26402 NTDPHSQEY 9 136 545.7252877157656 1089.436022498331 2 545.7254516482353 MULTI CID FTMS 0 0 0 3148 180413.203125 0.0428720720238497 16 -0.1558303833007812 1 Unmodified _NTDPHSQEY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 110.6747026088012 0.0053351249510064 2 {[QS]|[NT]}DPT[HN]EY 9 3 + 65.083 0.0 0.0 5.974 5.974 84.885 0.0 0.0 0.0 7.80052444315892 7.80052444315892 7.80052444315892 7.80052444315892 0 1.394599018282542 1.3979400086720375 0.9247425010840048 0.3807196863200844 {[QS]|[NT]}DPT[HN]EY;{[QS]|[NT]}EHPDTNY;{[QS]|[NT]}EHP[NS]EY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQEDTNY;{[QS]|[NT]}EHPDTGGY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQE[NS]EY;{[QS]|[NT]}DPT[HC][R{M(Oxidation (M))|F}];[HS]PQEDTNY;[AG]SEHPDTNY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQEDTGGY 5.974;5.258;4.9048;4.5603;4.4127;4.207;3.8799;3.846;3.8036;3.715 -;-;-;-;-;-;-;-;-;- 1985 + 1 2.44 100870.1 0.8600000143051147 383 2764 3148 DOHH2_400M_050219_2,3149 DOHH2_400M_050219_2,3149,NTDPHSQEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3150 14.387 342.0 190670.0 25 0 44070.0 + + 35198 SSDPQAQKY 9 88 512.2382791285235 1022.4620053238468 2 512.2381469607353 MULTI CID FTMS 0 0 0 3148 202366.609375 0.3063362239060585 9 -0.0872259140014648 2 Unmodified _SSDKRNMW_ ENSG00000187522|ENST00000378372|HSPA14 19.438996006549623 0.6237395211498085 2 Q 1 -1 13.495 0.0 0.0 1.3198 0.0 0.0 876.3927742220875 0.0 876.3927742220875 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 1.3198 - 65 + 1 2.44 54722.7 1.0 384 2764 3148 DOHH2_400M_050219_2,3150 DOHH2_400M_050219_2,3150,SSDKRNMW False False SSDPQAQKY 14.386957 512.238146960735 2379559.5 3148.0 ENSG00000187522|ENST00000378372|HSPA14 4.792129198710124 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3151 14.396 512.0 184120.0 25 0 26651.0 29265 QHPLTLNE 8 113 476.2484726422496 950.4823923512992 2 476.2484008669853 MULTI CID FTMS 0 0 0 3148 112275.6796875 0.5435014469382846 -6 0.0633258819580078 3 Unmodified _QHPLTLNE_ ENSG00000183454|ENST00000330684|GRIN2A;nc|ENSG00000183454|Q12879-2|GRIN2A 19.256988751693697 0.6264283240490721 2 [R{I|L}]KYEDQ 7 8 + 35.737 0.0 0.0 3.7599 3.7599 83.904 0.0 0.0 0.0 8.812380417879488 12.126535887568046 8.812380417879488 35.73709309832385 0 0.4247425010840047 0.6575773191777937 0.0 0.0 [R{I|L}]KYEDQ 3.7599 - 71 1 2.44 79436.9 1.0 385 2764 3148 DOHH2_400M_050219_2,3151 DOHH2_400M_050219_2,3151,QHPLTLNE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3154 14.405 29.0 2115400.0 25 0 121000.0 + 11289 GEVDYKKKY 9 85 377.2014107535692 0 377.2007934451103 PEAK CID FTMS 0 0 0 3153 983648.625 0.5110823423570637 -9 0.10296630859375 1 Unmodified _GEVDYKKKY_ ENSG00000169592|ENST00000563197|INO80E;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;ENST00000563040.5_1_16:30007580-30010601:+|nuORF;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;nc|ENSG00000169592|Q8NBZ0-2|INO80E 27.628801355627647 0.1319135480000405 2 KK 2 7 6.4537 0.0 0.0 0.85776 0.0 0.0 187.02835754053848 306.1463717096313 493.1747292501698 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + KK 0.85776 + + 23 + 1 2.44 55551.0 1.0 386 2766 3153 DOHH2_400M_050219_2,3154 DOHH2_400M_050219_2,3154,GEVDYKKKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3155 14.408 190.0 379660.0 25 0 40448.0 + 11288 GEVDYKKKY 9 83 565.2972846142968 1128.5800162953935 2 565.2980224490166 MULTI CID FTMS 0 0 0 3153 256676.796875 0.5575793597698339 -9 0.10296630859375 2 Unmodified _GEVDYKKKY_ ENSG00000169592|ENST00000563197|INO80E;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;ENST00000563040.5_1_16:30007580-30010601:+|nuORF;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;nc|ENSG00000169592|Q8NBZ0-2|INO80E 36.506200033944 0.094635877243972 2 {[DA]|[EG]}VD[YK]KKY 9 0 + 62.425 0.0 0.0 5.5313 5.5313 86.649 0.0 0.0 0.0 5.966649594412559 9.605032829368945 5.966649594412559 9.605032829368945 0 1.531234684152075 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}VD[YK]KKY;{[DA]|[EG]}VD[YK]KYK;Y{[CT]|[{M(Oxidation (M))|F}G]}VPQKKY;{[DA]|[EG]}[YQ][{I|L}T]KKY;[PG]MD[YK]KKY;Y[R{M(Oxidation (M))|F}]PQKKY;KKYKDVWY;KKYDKVWY;Y{[CT]|[{M(Oxidation (M))|F}G]}VP[AG]KKY;Y{[CT]|[{M(Oxidation (M))|F}G]}VPQKYK 5.5313;4.6802;3.5857;3.5602;3.4722;2.9411;2.9077;2.8218;2.7698;2.7346 +;-;-;-;-;-;-;-;-;- + 568 + 1 2.44 57219.6 1.0 387 2766 3153 DOHH2_400M_050219_2,3155 DOHH2_400M_050219_2,3155,GEVDYKKKY True True GEVDYKKKY 14.408462 565.298022449017 19584460.0 3153.0 ENSG00000169592|ENST00000563197|INO80E;;nc|ENSG00000169592|Q8NBZ0-2|INO80E;;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;;ENST00000563040.5_1_16:30007580-30010601:+|nuORF 7.414613087972005 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3156 14.422 800.0 206510.0 25 0 13904.0 + 30487 REEGAVDKSY 10 115 577.2778763783031 0 577.2780029177666 PEAK CID FTMS 0 0 0 3153 137164.140625 0.5315281347971778 -8 0.09893798828125 3 Unmodified _REEGAVDKSY_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 49.74193281347159 0.0502959109240587 2 SKDVQ 5 9 52.0 0.0 0.0 4.5117 0.0 0.0 181.07360659287275 411.1632174127563 592.236824005629 0.0 0.0 0.0 0.0 0 1.4436726795685342 0.0 0.8494850021680094 0.7614393726401688 SKDVQ 4.5117 - 280 + 1 2.44 126232.6 0.6299999952316284 388 2766 3153 DOHH2_400M_050219_2,3156 DOHH2_400M_050219_2,3156,REEGAVDKSY True True REEGAVDKSY 14.422294 577.278002917767 1201096.5 3153.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 5.148975054423015 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3159 14.436 407.0 240780.0 25 0 111680.0 -1 0 84 472.2728119118361 471.2655354452361 1 472.2724792361259 MULTI CID FTMS 0 0 0 3158 225327.421875 0.3929260930441864 -59 0.6482019424438477 1 2 Y 1 -1 11.99 0.0 0.0 2.5441 0.0 0.0 290.1911316139845 0.0 290.1911316139845 0.0 0.7306401783911909 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5441 - 23 + 1 2.44 82261.4 1.0 389 2768 3158 DOHH2_400M_050219_2,3159 DOHH2_400M_050219_2,3159, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3166 14.472 800.0 65181.0 25 0 4220.7 -1 0 60 753.9921531413996 2258.9546300243987 3 754.3278686404228 MULTI CID FTMS 0 0 0 3165 110433.1640625 0.6801652073367955 -9 0.0595560073852539 1 2 VS{[SA]|[TG]}Q[SG]H[HD] 10 -1 37.893 0.0 0.0 1.6774 0.0 0.0 1235.5262065785082 0.0 1235.5262065785082 0.0 24.704999916446795 0.0 0.0 0 0.4247425010840047 0.0 1.3494850021680094 0.5 VS{[SA]|[TG]}Q[SG]H[HD] 1.6774 - 305 + 1 2.44 42923.1 0.4900000095367431 390 2774 3165 DOHH2_400M_050219_2,3166 DOHH2_400M_050219_2,3166, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3169 14.48 53.0 844310.0 25 0 49784.0 + 12429 GTSPPSVEK 9 77 451.23485401698576 900.4551551007715 2 451.2347900271416 MULTI CID FTMS 0 0 0 3168 1046692.5625 0.8280101213822258 5 -0.0605621337890625 1 Unmodified _GTSPPSVEK_ ENSG00000181143|ENST00000397910|MUC16 15.248480904072842 0.4239247793462406 2 K 1 8 11.259 0.0 0.0 1.2504 0.0 0.0 754.34901298827 0.0 754.34901298827 0.0 1.3821049216444514 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 1.2504 + + 30 + 1 2.44 41311.5 1.0 391 2776 3168 DOHH2_400M_050219_2,3169 DOHH2_400M_050219_2,3169,GTSPPSVEK False True GTSPPSVEK 14.480406 451.234790027142 13639662.0 3168.0 ENSG00000181143|ENST00000397910|MUC16 4.209450085957845 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3170 14.495 800.0 160030.0 25 0 36033.0 + 6353 DVQQKRTL 8 110 494.2821038929415 986.5496548526828 2 494.2833740115166 MULTI CID FTMS 0 0 0 3168 91108.34375 0.6539276250596067 -6 0.0356369018554687 2 Unmodified _DVQQKRTL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 29.84058131909904 0.4163871034372953 2 DVQQKR[{I|L}T] 8 0 + 66.081 0.0 0.0 6.6982 6.6982 90.532 0.0 0.0 0.0 54.82234057180005 3.098943791441968 3.098943791441968 9.262137858390815 0 0.75 2.0 0.0 0.4247425010840047 + + DVQQKR[{I|L}T];DVQ[AG]KR[{I|L}T];DV[AG]QKR[{I|L}T];DV[AG][AG]KR[{I|L}T];{I|L}NDQKR[{I|L}T];{I|L}ND[AG]KR[{I|L}T] 6.6982;5.7594;5.7594;4.826;2.131;1.1922 +;-;-;-;-;- + 113 + 1 2.44 101662.3 0.6600000262260437 392 2776 3168 DOHH2_400M_050219_2,3170 DOHH2_400M_050219_2,3170,DVQQKRTL False True DVQQKRTL 14.494556 494.283374011517 717210.5625 3168.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 3.528763930002848 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3173 14.503 63.0 469880.0 25 0 35443.0 + 36745 TDTQNFSSE 9 57 514.7118377988918 1027.4091226645835 2 514.7112304568291 MULTI CID FTMS 0 0 0 3172 463196.4375 0.8252505769181946 -1 0.0037746429443359 1 Unmodified _TDTQNFSSE_ ENSG00000146674|ENST00000613132|IGFBP3;ENST00000460477.1_1_7:45956706-45960430:-|nuORF;nc|ENSG00000146674|P17936-2|IGFBP3 11.640296217721598 0.521594087909532 2 SE 2 7 17.969 0.0 0.0 1.749 0.0 0.0 793.323244223957 0.0 793.323244223957 0.0 0.9795598477231308 0.0 0.0 0 0.0 0.0 0.5451140161145328 0.0 + SE 1.749 + + 22 + 1 2.44 30482.4 1.0 393 2778 3172 DOHH2_400M_050219_2,3173 DOHH2_400M_050219_2,3173,TDTQNFSSE False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3174 14.517 800.0 54096.0 25 0 14220.0 28581 PTVDPTVKY 9 63 510.27485612015937 1018.5351593071188 2 510.2756225466728 MULTI CID FTMS 0 0 0 3172 125023.7734375 0.1634831549975919 -11 0.0758619308471679 2 Unmodified _PTVDPTVKY_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 3.944395688203298 0.7769873103969335 2 K 1 8 13.378 0.0 0.0 1.3135 0.0 0.0 872.4291850412969 0.0 872.4291850412969 0.0 11.784623214403016 0.0 0.0 0 0.0 0.0 0.0 0.1595680409956017 + K 1.3135 + + 26 + 1 2.44 45189.9 0.7799999713897705 394 2778 3172 DOHH2_400M_050219_2,3174 DOHH2_400M_050219_2,3174,PTVDPTVKY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3177 14.537 800.0 132950.0 25 0 36411.0 -1 0 109 455.2519345652794 454.24465809867945 1 455.2509643435478 MULTI CID FTMS 0 0 0 3176 97493.3125 0.619995552419152 18 -0.3809661865234375 1 2 R 1 -1 11.42 0.0 0.0 2.5141 0.0 0.0 280.1324124705529 0.0 280.1324124705529 0.0 0.5825278453571858 0.0 0.0 0 0.0 0.0 0.0 0.0 R 2.5141 - 18 + 1 2.44 88287.4 0.800000011920929 395 2780 3176 DOHH2_400M_050219_2,3177 DOHH2_400M_050219_2,3177, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3180 14.547 228.0 655980.0 25 0 176780.0 + 40007 VGEIDIVA 8 80 408.2285337992219 814.4425146652438 2 408.2282897830009 MULTI CID FTMS 0 0 0 3179 116164.328125 0.6505335246472409 -2 0.0198221206665039 1 Unmodified _VGEIDIVA_ REV__ENSG00000165164|ENST00000378653|CFAP47 9.347437153973935 0.7675937258251505 2 P 1 -1 11.783 0.0 0.0 1.4467 0.0 0.0 699.3785936220783 0.0 699.3785936220783 0.0 5.67349286948728 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.4467 - 16 + 1 2.44 121392.2 1.0 396 2782 3179 DOHH2_400M_050219_2,3180 DOHH2_400M_050219_2,3180,VGEIDIVA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3181 14.561 800.0 206080.0 25 0 38812.0 + -1 HRELVCCR 8 97 536.7607794182536 1071.5070059033071 2 536.7615844607353 MULTI CID FTMS 0 0 0 3179 74897.359375 0.3919466738796468 -9 0.0884265899658203 2 Carbamidomethyl (C) _HRELVC(Carbamidomethyl (C))CR_ REV__ENST00000339094.5_1_15:85081807-85112930:-|nuORF 4.75600775471527 0.7954636275367004 2 Y 1 -1 12.474 0.0 0.0 1.1642 0.0 0.0 890.4320680144384 0.0 890.4320680144384 0.0 2.64136888583522 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1642 - 16 + 1 2.44 129534.5 0.8500000238418579 397 2782 3179 DOHH2_400M_050219_2,3181 DOHH2_400M_050219_2,3181,HRELVCCR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3182 14.575 800.0 188170.0 25 0 7051.5 + -1 LTTLDCCYV 9 135 544.2431656417507 1086.4717783503013 2 544.2436401247978 MULTI CID FTMS 0 0 0 3179 138213.234375 0.5412950035975586 -9 0.0884265899658203 3 Carbamidomethyl (C) _LTTLDC(Carbamidomethyl (C))CYV_ REV__ENSG00000106069|ENST00000222792|CHN2;REV__nc|ENSG00000106069|P52757-3|CHN2;REV__nc|ENSG00000106069|P52757-4|CHN2;REV__nc|ENSG00000106069|P52757-6|CHN2;REV__nc|ENSG00000106069|P52757-7|CHN2;REV__nc|ENSG00000106069|P52757-8|CHN2;REV__nc|ENSG00000106069|P52757-9|CHN2 7.289230182591677 0.6602208344931196 2 G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N 4 -1 18.5 0.0 0.0 1.7028 0.0 0.0 622.2651386305488 0.0 622.2651386305488 0.0 3.1478096642242512 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N 1.7028 - 518 1 2.44 117844.2 0.9200000166893004 398 2782 3179 DOHH2_400M_050219_2,3182 DOHH2_400M_050219_2,3182,LTTLDCCYV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3184 14.579 106.0 361060.0 25 0 74654.0 + + 37087 SAMVRSEA 8 61 425.7079226380562 849.4012923429124 2 425.7079650759697 MULTI CID FTMS 0 0 0 3183 517521.84375 0.4518019425354011 12 -0.2508630752563476 1 Unmodified _TGMVERSA_ ENSG00000198843|ENST00000471696|SELENOT;ENST00000485923.1_1_3:150321131-150321287:+|nuORF;ENST00000471696.5_2_3:150321089-150340178:+|nuORF 14.838274106304384 0.6917062315640577 2 {[SA]|[TG]}MV 4 -1 40.445 0.0 0.0 4.7616 0.0 0.0 0.0 458.20050989322505 458.20050989322505 28.662575976154923 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[SA]|[TG]}MV 4.7616 + + 30 + 1 2.44 38279.4 1.0 399 2783 3183 DOHH2_400M_050219_2,3184 DOHH2_400M_050219_2,3184,TGMVERSA False False SAMVRSEA 14.578838 425.70796507597 5393244.5 3183.0 ENSG00000198843|ENST00000471696|SELENOT;;ENST00000485923.1_1_3:150321131-150321287:+|nuORF;;ENST00000471696.5_2_3:150321089-150340178:+|nuORF 1.2474460378289225 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3185 14.582 135.0 444990.0 25 0 76892.0 + 772 AESASEAAKKY 11 90 385.52768124746586 1153.5612143425976 3 385.5273620486259 MULTI CID FTMS 0 0 0 3183 201396.515625 0.3179340804216251 -6 0.0797138214111328 2 Unmodified _AESASEAAKKY_ ENSG00000185825|ENST00000345046|BCAP31;nc|ENSG00000185825|P51572-2|BCAP31 22.65808497894818 0.560183898709508 2 SEA[KA]KY 7 4 17.414 0.0 0.0 1.5096 0.0 0.0 358.1473902631636 0.0 358.1473902631636 0.0 12.809801125943991 0.0 0.0 0 0.25 0.0 0.0 0.0 + SEA[KA]KY 1.5096 + + 76 + 1 2.44 52733.5 1.0 400 2783 3183 DOHH2_400M_050219_2,3185 DOHH2_400M_050219_2,3185,AESASEAAKKY False True AESASEAAKKY 14.581897 385.527362048626 5863830.25 3183.0 nc|ENSG00000185825|P51572-2|BCAP31;;ENSG00000185825|ENST00000345046|BCAP31 6.871993223826091 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3187 14.586 0.61 84502000.0 25 0 14307000.0 + -1 IQRLETMK 8 66 517.7862136552536 1033.5578743773071 2 517.7872192263603 MULTI CID FTMS 0 0 0 3186 93375256.0 0.5720876916646277 -7 0.0870141983032226 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 2 T{M(Oxidation (M))|F}K 3 -1 32.976 0.0 0.0 3.1905 0.0 0.0 639.3679767716416 0.0 639.3679767716416 0.0 13.10612165723995 0.0 0.0 0 1.0 0.0 0.0 0.3054621874040891 T{M(Oxidation (M))|F}K 3.1905 + + 96 + 1 2.44 46307.8 1.0 401 2784 3186 DOHH2_400M_050219_2,3187 DOHH2_400M_050219_2,3187,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3188 14.6 800.0 296690.0 25 0 47386.0 -1 VGIRCIHVC 9 95 528.7766583889445 1055.538763844689 2 528.7764770388603 MULTI CID FTMS 0 0 0 3186 155006.640625 0.7327821304550411 -4 0.0611209869384765 2 Carbamidomethyl (C) _VGIRCIHVC(Carbamidomethyl (C))_ ENST00000602029.1_1_19:50519188-50519419:-|nuORF 4.75600775471527 0.7486543447549536 2 KE 2 -1 13.271 0.0 0.0 1.2573 0.0 0.0 63.99430124541261 731.3770846002561 795.3713858456688 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 KE 1.2573 - 41 + 1 2.44 184627.0 0.7200000286102295 402 2784 3186 DOHH2_400M_050219_2,3188 DOHH2_400M_050219_2,3188,VGIRCIHVC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3190 14.609 282.0 406230.0 25 0 105650.0 + 28306 PRRPPPPPP 9 89 505.7985236524376 1009.5824943716752 2 505.7988159060478 MULTI CID FTMS 0 0 0 3189 415961.03125 0.6708697225548661 -6 0.0833950042724609 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 74.42276476219924 0.019389277360085 2 PRRPPPPPP 9 0 + 59.49 0.0 0.0 5.8925 5.8925 76.981 0.0 0.0 0.0 1.1593932329042005 1.974987195809419 1.1593932329042005 1.1593932329042005 0 2.168826521534556 0.0 0.0 0.0 + + PRRPPPPPP;RPRPPPPPP;PRRPPPKY;RPRPPPKY;PRR[YK]PPP;RPR[YK]PPP;[RP]R[YK]PPP;PRR[YK]KY;RPR[YK]KY;PRRP[YK]PP 5.8925;5.7777;5.6969;5.5821;4.5863;4.4715;4.2984;4.0513;3.9364;3.6172 +;-;-;-;-;-;-;-;-;- + 325 + 1 2.405 93716.6 1.0 403 2785 3189 DOHH2_400M_050219_2,3190 DOHH2_400M_050219_2,3190,PRRPPPPPP True True RPPRPPPPP 14.608795 505.798815906048 15958735.0 3189.0 ENSG00000142235|ENST00000600059|LMTK3 -0.3773306210835774 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3191 14.623 800.0 128730.0 25 0 15771.0 -1 VGRSWCCLCS 10 76 585.7453405602781 0 585.7467529177666 PEAK CID FTMS 0 0 0 3189 101162.546875 0.5554038789037555 -4 0.0635519027709961 2 Carbamidomethyl (C) _VGRSWC(Carbamidomethyl (C))CLCS_ ENST00000540987.1_1_12:133225370-133225942:-|nuORF 3.5964929083625545 0.3961065659209837 2 V 1 -1 2.4743 0.0 0.0 0.21157 0.0 0.0 673.7533326324718 393.6382235162719 1067.3915561487438 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.21157 + + 1 + 1 2.405 82975.9 0.6200000047683716 404 2785 3189 DOHH2_400M_050219_2,3191 DOHH2_400M_050219_2,3191,VGRSWCCLCS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3192 14.636 800.0 118650.0 25 0 16441.0 + 43450 WTAIYSSK 8 108 478.2482865946179 0 478.2465392947197 PEAK CID FTMS 0 0 0 -1 0 3 Unmodified _WTAIYSSK_ REV__ENST00000523444.1_1_8:90992965-90993727:-|nuORF 15.847184025352805 0.4758297917908462 2 SSR 3 -1 20.177 0.0 0.0 2.114 0.0 0.0 146.10770492576086 475.18406091861567 621.2917658443765 0.0 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 SSR 2.114 - 21 + 1 2.405 77083.1 0.5899999737739563 405 2785 3189 DOHH2_400M_050219_2,3192 DOHH2_400M_050219_2,3192,WTAIYSSK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3194 14.646 285.0 256150.0 25 0 13474.0 + 770 AESARPGRSSH 11 102 577.7854236422467 1153.5562943512932 2 578.2899047732353 MULTI CID FTMS 0 0 0 3193 197711.53125 0.8917238326159019 -3 0.0618009567260742 1 Unmodified _AESARPGRSSH_ REV__ENST00000508478.1_1_5:175956522-175957037:-|nuORF 19.361941925380144 0.6323962752489956 2 {[CP]|[EA]}SA 4 -1 28.857 0.0 0.0 2.5015 0.0 0.0 0.0 792.3842722167807 792.3842722167807 2.565340550185514 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.7742275032520141 0.0 {[CP]|[EA]}SA 2.5015 + + 500 1 2.405 58753.6 1.0 406 2786 3193 DOHH2_400M_050219_2,3194 DOHH2_400M_050219_2,3194,AESARPGRSSH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3195 14.66 800.0 138720.0 25 0 12025.0 -1 CSQAPHYYC 9 107 593.2277427481301 1184.4409325630602 2 593.2269164919853 MULTI CID FTMS 0 0 0 3193 124882.9453125 0.670203894381513 -3 0.0618009567260742 2 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))SQAPHYYC(Carbamidomethyl (C))_ ENST00000398425.7_1_20:23375586-23402039:-|nuORF;ENST00000432543.6_1_20:23375586-23375812:-|nuORF;ENST00000472855.5_1_20:23375586-23402039:-|nuORF 2.059750862983233 0.8427793054688888 2 DDQ{M(Oxidation (M))|F} 4 -1 14.679 0.0 0.0 1.2393 0.0 0.0 0.0 676.2650653459136 676.2650653459136 3.841794588378447 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 DDQ{M(Oxidation (M))|F} 1.2393 - 105 + 1 2.405 85542.9 0.6700000166893005 407 2786 3193 DOHH2_400M_050219_2,3195 DOHH2_400M_050219_2,3195,CSQAPHYYC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3197 14.665 148.0 434320.0 25 0 36563.0 + 11290 GEVDYKKKY 9 85 377.2014107535692 0 377.2010986208916 PEAK CID FTMS 0 0 0 3196 241248.46875 0.1253474354206563 12 -0.2740697860717773 1 Unmodified _GEVDYKKKY_ ENSG00000169592|ENST00000563197|INO80E;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;ENST00000563040.5_1_16:30007580-30010601:+|nuORF;ENST00000568043.5_1_16:30007580-30007859:+|nuORF;nc|ENSG00000169592|Q8NBZ0-2|INO80E 27.628801355627647 0.1319135480000405 2 KK 2 7 7.9588 0.0 0.0 1.0578 0.0 0.0 187.02756408350723 306.1471041315063 493.1746682150135 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + KK 1.0578 + + 27 + 1 2.405 59021.4 1.0 408 2787 3196 DOHH2_400M_050219_2,3197 DOHH2_400M_050219_2,3197,GEVDYKKKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3199 14.683 800.0 231260.0 25 0 65086.0 -1 0 117 502.2860864342268 501.2788099676269 1 502.2841369509697 MULTI CID FTMS 0 0 0 3198 159414.84375 0.2559827536840009 -202 1.9477462768554688 1 2 K 1 -1 14.408 0.0 0.0 2.8743 0.0 0.0 355.1727288902815 0.0 355.1727288902815 0.0 2.8143593281113244 0.0 0.0 0 0.0 0.0 0.0 0.1643943297944484 K 2.8743 - 15 + 1 2.405 146530.3 0.8500000238418579 409 2788 3198 DOHH2_400M_050219_2,3199 DOHH2_400M_050219_2,3199, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3200 14.697 800.0 47410.0 25 0 9672.3 -1 0 28 1104.886157214642 0 1104.886157214642 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.405 36331.3 0.6100000143051147 410 2788 3198 DOHH2_400M_050219_2,3200 DOHH2_400M_050219_2,3200, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3201 14.711 800.0 74004.0 25 0 10378.0 36587 TALTHKQSY 9 96 524.7758666872978 0 524.7758666872978 PEAK CID FTMS 0 0 0 -1 0 3 Unmodified _TALTHKQSY_ ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1 10.823927491677226 0.3028200641087142 2 ES 2 8 9.464 0.0 0.0 0.90345 0.0 0.0 170.22609753299554 658.2091158502561 828.4352133832517 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ES 0.90345 - 19 + 1 2.405 48845.3 0.6899999976158142 411 2788 3198 DOHH2_400M_050219_2,3201 DOHH2_400M_050219_2,3201,TALTHKQSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3203 14.721 297.0 425580.0 25 0 21554.0 + 30594 REVSPAHQY 9 118 543.7697265539199 1085.5249001746397 2 543.7701904177666 MULTI CID FTMS 0 0 0 3202 269440.09375 0.4351919075879738 -9 0.1900405883789062 1 Unmodified _REVSPAHQY_ ENSG00000105404|ENST00000222008|RABAC1;ENST00000595226.1_1_19:42461000-42461518:-|nuORF;ENST00000598057.1_1_19:42461155-42461461:-|nuORF 21.53697664764585 0.2571576504437394 2 HQY 3 6 33.812 0.0 0.0 3.1148 0.0 0.0 639.3358026925874 0.0 639.3358026925874 0.0 21.05078968826621 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 + HQY 3.1148 + + 115 1 2.367 98474.7 1.0 412 2789 3202 DOHH2_400M_050219_2,3203 DOHH2_400M_050219_2,3203,REVSPAHQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3206 14.742 748.0 99400.0 25 0 22433.0 -1 0 65 660.320029665993 659.312753199393 1 660.3210327029228 MULTI CID FTMS 0 0 0 3205 94192.0625 0.480190856264363 11 -0.2599363327026367 1 2 AAEK 4 -1 36.389 0.0 0.0 5.5192 0.0 0.0 242.0891105032073 0.0 242.0891105032073 0.0 21.81897028431644 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.25 AAEK 5.5192 - 29 + 1 2.367 60374.6 1.0 413 2791 3205 DOHH2_400M_050219_2,3206 DOHH2_400M_050219_2,3206, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3208 14.76 800.0 77983.0 25 0 6333.0 22858 LSAIKTPYP 9 101 495.2873027692886 0 495.2885314822197 PEAK CID FTMS 0 0 0 3207 76756.953125 0.6178226829676421 1 -0.031473159790039 1 Unmodified _LSAIKTPYP_ ENST00000515766.1_1_4:1326530-1330951:+|nuORF 7.910154910731844 0.3362437653303669 2 E 1 9 3.4949 0.0 0.0 0.35353 0.0 0.0 790.458366059282 66.03592096500233 856.4942870242843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.35353 - 5 + 1 2.367 50897.4 0.8100000023841858 414 2792 3207 DOHH2_400M_050219_2,3208 DOHH2_400M_050219_2,3208,LSAIKTPYP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3209 14.773 758.0 238440.0 25 0 59728.0 -1 0 116 486.2524590380824 485.2451825714824 1 486.2518798708916 MULTI CID FTMS 0 0 0 3207 205892.78125 0.6499530629993592 -37 0.5045814514160156 2 2 [KT]T 3 -1 19.507 0.0 0.0 4.02 0.0 0.0 0.0 152.03092498941547 152.03092498941547 0.7699217471275013 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.25 [KT]T 4.02 - 45 1 2.367 144719.8 1.0 415 2792 3207 DOHH2_400M_050219_2,3209 DOHH2_400M_050219_2,3209, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3211 14.777 95.0 143590.0 25 0 18467.0 13900 HVVACHQLL 9 40 510.27485612015937 1018.5351593071188 2 510.2747070193291 MULTI CID FTMS 0 0 0 3210 543405.0625 0.7105654518064437 4 -0.0957450866699218 1 Unmodified _HVVACHQLL_ ENSG00000136011|ENST00000388887|STAB2 2.059750862983233 0.8427793054688888 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.367 16155.4 1.0 416 2793 3210 DOHH2_400M_050219_2,3211 DOHH2_400M_050219_2,3211,HVVACHQLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3212 14.779 94.0 366230.0 25 0 22353.0 + 44947 YPQFEQSE 8 63 514.2209360612972 0 514.2212402224541 PEAK CID FTMS 0 0 0 3210 318673.9375 0.2886759914282398 7 -0.1793375015258789 2 Unmodified _YPQFEQSE_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3 14.838274106304384 0.487171416001894 2 S 1 7 13.737 0.0 0.0 1.3383 0.0 0.0 792.3417306657599 144.0307558649047 936.3724865306646 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 + S 1.3383 + + 25 + 1 2.367 33157.6 1.0 417 2793 3210 DOHH2_400M_050219_2,3212 DOHH2_400M_050219_2,3212,YPQFEQSE False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3213 14.793 800.0 47630.0 25 0 9234.5 -1 0 36 633.5319702029228 0 633.5319702029228 PEAK CID FTMS 0 0 0 -1 0 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.367 39215.2 0.7300000190734863 418 2793 3210 DOHH2_400M_050219_2,3213 DOHH2_400M_050219_2,3213, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3215 14.812 800.0 120670.0 25 0 35210.0 -1 ETDRGMSAEY 10 104 587.7376045633664 1173.4606561935327 2 587.7393066287041 MULTI CID FTMS 0 0 0 3214 87478.578125 0.3862228045496874 -9 0.1929483413696289 1 Oxidation (M) _ETDRGM(Oxidation (M))SAEY_ ENSG00000100347|ENST00000350028|SAMM50 20.41453444215458 0.5050059513928961 2 SAEY 4 -1 31.899 0.0 0.0 2.7184 0.0 0.0 705.2740345685562 0.0 705.2740345685562 0.0 14.90926274548464 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 SAEY 2.7184 + + 212 1 2.367 76798.1 0.6800000071525574 419 2794 3214 DOHH2_400M_050219_2,3215 DOHH2_400M_050219_2,3215,ETDRGMSAEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3216 14.825 800.0 214820.0 25 0 27077.0 + 31954 RVDPNGSRY 9 121 532.2672606602954 1062.5199683873907 2 532.2655517458916 MULTI CID FTMS 0 0 0 3214 84162.375 0.35129684386083 -2 0.0515689849853515 2 Unmodified _RVDPNGSRY_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 38.61474834105838 0.0830609365873449 2 [RV]D[NP]GS 7 2 28.971 0.0 0.0 2.7266 0.0 0.0 0.0 334.1500702763157 334.1500702763157 12.600453850821363 0.0 0.0 0.0 0 1.325257498915995 0.0 0.0 0.4247425010840047 + [RV]D[NP]GS 2.7266 + + 103 1 2.367 134896.5 0.7099999785423279 420 2794 3214 DOHH2_400M_050219_2,3216 DOHH2_400M_050219_2,3216,RVDPNGSRY True True RVDPNGSRY 14.825475 532.265551745892 141443928.0 3214.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;;ENST00000545930.5_1_11:61082914-61091715:-|nuORF;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 6.994740168253581 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3218 14.831 95.0 555300.0 25 0 26039.0 + 26403 NTDPHSQEY 9 93 545.7253492305368 1089.4361455278736 2 545.7259399294853 MULTI CID FTMS 0 0 0 3217 752156.5625 0.8889945482853961 -1 0.0322275161743164 1 Unmodified _NTDPHSQEY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 46.020951573049366 0.0490941689151868 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQEY 6 3 23.918 0.0 0.0 2.1955 0.0 0.0 0.0 345.1009153855486 345.1009153855486 4.850227980532793 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6549471895720985 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQEY 2.1955 + + 357 1 2.337 46733.7 1.0 421 2795 3217 DOHH2_400M_050219_2,3218 DOHH2_400M_050219_2,3218,NTDPHSQEY True True NTDPHSQEY 14.830856 545.725939929485 70244958.0 3217.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 7.724451382954915 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3219 14.837 341.0 307150.0 25 0 41094.0 + 43774 YEKNPDSHGY 10 102 403.8439039993178 1208.5098825981534 3 403.8434631228447 MULTI CID FTMS 0 0 0 3217 220679.5625 1.0 0 0.0 2 Unmodified _YEKNPDSHGY_ ENSG00000147123|ENST00000377811|NDUFB11;nc|ENSG00000147123|Q9NX14-2|NDUFB11 47.594388314883695 0.0942698883389255 2 [YE]KNPDSHGY 10 0 [YE] + + 51.121 17.218 5.8947 4.2301 4.2301 52.467 0.0 0.0 0.0 0.0 39.861578043116346 0.0 0.0 0 1.174742501084005 0.0 0.4247425010840047 0.0 + + [YE]KNPDSHGY 4.2301 + + 304 + 1 2.337 84470.8 1.0 422 2795 3217 DOHH2_400M_050219_2,3219 DOHH2_400M_050219_2,3219,YEKNPDSHGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3220 14.851 800.0 281820.0 25 0 60739.0 + -1 HRELVCCR 8 115 536.7607794182536 1071.5070059033071 2 536.7620117068291 MULTI CID FTMS 0 0 0 3217 185519.984375 0.970847856596884 4 -0.1085453033447265 3 Carbamidomethyl (C) _HRELVC(Carbamidomethyl (C))CR_ REV__ENST00000339094.5_1_15:85081807-85112930:-|nuORF 7.910154910731844 0.7763180056447161 2 Y 1 -1 16.99 0.0 0.0 1.5856 0.0 0.0 890.432953024204 0.0 890.432953024204 0.0 5.206963425791127 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5856 - 125 + 1 2.337 175863.3 0.8899999856948853 423 2795 3217 DOHH2_400M_050219_2,3220 DOHH2_400M_050219_2,3220,HRELVCCR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3222 14.855 0.51 96239000.0 25 0 18678000.0 + -1 IQRLETMK 8 62 517.7862136552536 1033.5578743773071 2 517.7872192263603 MULTI CID FTMS 0 0 0 3221 118128960.0 0.7237476708512921 5 -0.1272640228271484 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 2 T{M(Oxidation (M))|F}K 3 -1 42.747 0.0 0.0 4.1359 0.0 0.0 639.3716297834 0.0 639.3716297834 0.0 33.79493455131808 0.0 0.0 0 1.2302046884880935 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 4.1359 + + 35 1 2.337 45451.6 1.0 424 2796 3221 DOHH2_400M_050219_2,3222 DOHH2_400M_050219_2,3222,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3223 14.869 800.0 310870.0 25 0 47284.0 + 12792 GVRSIGGGEQP 11 106 528.7766583889445 1055.538763844689 2 528.7765991091728 MULTI CID FTMS 0 0 0 3221 108735.71875 0.5140398586854747 8 -0.1802930831909179 2 Unmodified _GVRSIGGGEQP_ REV__ENSG00000198369|ENST00000356388|SPRED2;REV__nc|ENSG00000198369|Q7Z698-2|SPRED2 7.608950283845883 0.8392484121837455 2 R 1 -1 12.218 0.0 0.0 1.1576 0.0 0.0 881.4268844274999 0.0 881.4268844274999 0.0 1.4215905896025305 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.1576 + + 86 + 1 2.337 191952.5 0.7799999713897705 425 2796 3221 DOHH2_400M_050219_2,3223 DOHH2_400M_050219_2,3223,GVRSIGGGEQP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3225 14.874 166.0 447920.0 25 0 121420.0 + 28307 PRRPPPPPP 9 70 505.7985236524376 1009.5824943716752 2 505.7991821169853 MULTI CID FTMS 0 0 0 3224 372823.375 0.6012965046187095 6 -0.1191730499267578 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 39.957323273325 0.0756908302845263 2 PR[YK]PPP 7 4 33.192 0.0 0.0 3.2877 0.0 0.0 156.10159499336095 0.0 156.10159499336095 0.0 28.58812600670348 0.0 0.0 0 1.774227503252014 0.0 0.0 0.0 PR[YK]PPP 3.2877 - 72 1 2.337 64772.1 1.0 426 2797 3224 DOHH2_400M_050219_2,3225 DOHH2_400M_050219_2,3225,PRRPPPPPP True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3226 14.888 800.0 147120.0 25 0 15514.0 10994 GASDTLTGQA 10 125 460.7201740892461 919.4257952452924 2 460.7196838259697 MULTI CID FTMS 0 0 0 3224 240594.59375 1.0 0 0.0 2 Unmodified _GASDTLTGQA_ ENST00000468892.5_1_3:183910449-183911483:+|nuORF 15.847184025352805 0.5816416552707754 2 SNS{I|L}DP 6 8 22.853 0.0 0.0 2.4856 0.0 0.0 288.1412015947048 0.0 288.1412015947048 0.0 -0.3430920889380644 -0.3430920889380644 0.0 0 0.0 0.0 1.4545391030138068 0.0 SNS{I|L}DP 2.4856 - 652 + 1 2.337 94587.2 0.9700000286102296 427 2797 3224 DOHH2_400M_050219_2,3226 DOHH2_400M_050219_2,3226,GASDTLTGQA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3227 14.902 800.0 29467.0 25 0 5693.0 -1 0 38 767.1241332888603 0 767.1241332888603 PEAK CID FTMS 0 0 0 -1 0 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.337 27379.7 0.5600000023841858 428 2797 3224 DOHH2_400M_050219_2,3227 DOHH2_400M_050219_2,3227, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3229 14.92 800.0 171130.0 25 0 17033.0 + -1 EESYIMRNP 9 124 577.7614975362569 0 577.7605468630791 PEAK CID FTMS 0 0 0 3228 95361.109375 0.7875616557747137 9 -0.1849136352539062 1 Oxidation (M) _EESYIM(Oxidation (M))RNP_ REV__ENST00000332981.9_1_14:62016967-62017273:+|nuORF 7.910154910731844 0.3362437653303669 2 S{M(Oxidation (M))|F}N 3 -1 11.427 0.0 0.0 0.9906 0.0 0.0 228.067340260882 574.3100069635374 802.3773472244193 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S{M(Oxidation (M))|F}N 0.9906 - 71 + 1 2.306 110257.9 0.6499999761581421 429 2798 3228 DOHH2_400M_050219_2,3229 DOHH2_400M_050219_2,3229,EESYIMRNP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3230 14.934 800.0 77970.0 25 0 4356.8 + -1 EESWDHCCFMK 11 87 772.7823403891667 1543.5501278451334 2 772.7814819216728 MULTI CID FTMS 0 0 0 3228 72802.921875 0.4712253775102879 -4 0.1085100173950195 2 2 Carbamidomethyl (C),Oxidation (M) _EESWDHC(Carbamidomethyl (C))C(Carbamidomethyl (C))FM(Oxidation (M))K_ REV__ENST00000475996.1_1_6:29695742-29695880:+|nuORF 0.3070304955306653 0.8736993455979228 2 AEDVRK 6 -1 18.938 0.0 0.0 1.2269 0.0 0.0 827.1675727687647 0.0 827.1675727687647 0.0 8.453519130650594 0.0 0.0 0 0.0 0.0 0.0 0.0 AEDVRK 1.2269 - 60 + 1 2.306 49614.6 0.5600000023841858 430 2798 3228 DOHH2_400M_050219_2,3230 DOHH2_400M_050219_2,3230,EESWDHCCFMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3232 14.952 800.0 109060.0 25 0 10557.0 4695 DDDDDVSIEY 10 99 593.2277427481301 1184.4409325630602 2 593.2287475466728 MULTI CID FTMS 0 0 0 3231 93987.875 0.5044006584887764 10 -0.1946668624877929 1 Unmodified _DDDDDVSIEY_ ENSG00000130528|ENST00000252825|HRC 1.4819007175156935 0.719781833666733 2 D 1 9 4.6041 0.0 0.0 0.38871 0.0 0.0 63.82734465334472 1002.5614685779336 1066.3888132312782 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.38871 + + 4 + 1 2.306 71469.7 0.6600000262260437 431 2799 3231 DOHH2_400M_050219_2,3232 DOHH2_400M_050219_2,3232,DDDDDVSIEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3234 14.971 800.0 187070.0 25 0 24238.0 + 17589 KPTAAFHLL 9 128 499.2933288769058 996.5721048206116 2 499.2941772341728 MULTI CID FTMS 0 0 0 3233 118131.375 0.4105369370449517 -4 0.1016521453857421 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 26.88365393820708 0.1891292719743517 2 KPT 3 -1 35.903 0.0 0.0 3.6026 0.0 0.0 0.0 667.3546107656161 667.3546107656161 20.497060573564827 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.0 0.0 KPT 3.6026 + + 157 + 1 2.306 116374.7 0.7300000190734863 432 2800 3233 DOHH2_400M_050219_2,3234 DOHH2_400M_050219_2,3234,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3235 14.978 405.0 209790.0 25 0 76742.0 -1 0 70 436.2369995959689 435.2297231293689 1 436.2369872927666 MULTI CID FTMS 0 0 0 3233 148280.203125 0.6817257279502913 9 -0.1761980056762695 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.306 72572.6 1.0 433 2800 3233 DOHH2_400M_050219_2,3235 DOHH2_400M_050219_2,3235, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3237 14.984 128.0 453780.0 25 0 32275.0 + 30595 REVSPAHQY 9 68 543.7697265539199 1085.5249001746397 2 543.7700683474541 MULTI CID FTMS 0 0 0 3236 434632.46875 0.7020058913373316 3 -0.0530290603637695 1 Unmodified _REVSPAHQY_ ENSG00000105404|ENST00000222008|RABAC1;ENST00000595226.1_1_19:42461000-42461518:-|nuORF;ENST00000598057.1_1_19:42461155-42461461:-|nuORF 32.78568957990786 0.1150597335874693 2 PAPHQY 6 5 40.648 0.0 0.0 3.7446 0.0 0.0 374.1989613263688 0.0 374.1989613263688 0.0 29.41122510072759 0.0 0.0 0 1.3737125054200234 0.0 0.0 0.0 PAPHQY 3.7446 - 43 1 2.278 49436.2 1.0 434 2801 3236 DOHH2_400M_050219_2,3237 DOHH2_400M_050219_2,3237,REVSPAHQY True True REVSPAHQY 14.984117 543.770068347454 9232941.0 3236.0 ENST00000595226.1_1_19:42461000-42461518:-|nuORF;;ENST00000598057.1_1_19:42461155-42461461:-|nuORF;;ENSG00000105404|ENST00000222008|RABAC1 7.0432149569193525 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3240 15.004 800.0 206170.0 25 0 60828.0 + 19130 LDYDEDEDDYE 11 121 474.1677506162532 1419.4814224489596 3 474.1676208376884 MULTI CID FTMS 0 0 0 3239 135993.0 0.7949421394999808 4 -0.0986013412475586 1 Unmodified _LDYDEDEDDYE_ REV__ENSG00000116962|ENST00000264187|NID1;REV__nc|ENSG00000116962|P14543-2|NID1 4.11662792887243 0.8557254166428417 2 [YC(Carbamidomethyl (C))]Y[C(Carbamidomethyl (C))D]PNHEY 10 -1 + 19.275 0.0 0.0 1.3579 1.3579 67.121 0.0 0.0 0.0 3.7903905959368736 4.52561882712928 3.7903905959368736 2.9537157273559664 0 0.8182503180159344 0.0 0.0 0.0 [YC(Carbamidomethyl (C))]Y[C(Carbamidomethyl (C))D]PNHEY;[YC(Carbamidomethyl (C))]YW[YQ]C(Carbamidomethyl (C))DY;[YC(Carbamidomethyl (C))]Y[C(Carbamidomethyl (C))D]P[HQ]DY;[YC(Carbamidomethyl (C))]Y[C(Carbamidomethyl (C))D]PNHYE;[YC(Carbamidomethyl (C))]YW[YQ][CG]DY;[YC(Carbamidomethyl (C))]Y{[DA]|[EG]}[YQ]C(Carbamidomethyl (C))DY 1.3579;1.1498;0.96128;0.71729;0.5011;0.5011 -;-;-;-;-;- 332 + 1 2.278 129312.0 0.8399999737739563 435 2803 3239 DOHH2_400M_050219_2,3240 DOHH2_400M_050219_2,3240,LDYDEDEDDYE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3241 15.017 765.0 397780.0 25 0 111530.0 + 7266 EESRPQNANY 10 128 604.2710887018901 1206.52762447058 2 604.2714111208916 MULTI CID FTMS 0 0 0 3239 188183.359375 1.0 0 0.0 2 Unmodified _EESRPQNANY_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 61.60191391372663 0.0323840705564037 2 [{I|L}P]TCS[QP]NANY 11 5 + 56.626 0.0 0.0 4.6933 4.6933 80.976 0.0 0.0 0.0 5.558580160885555 11.929344830665606 5.558580160885555 9.128498242811013 0 0.75 1.0969100130080565 1.8494850021680087 0.4247425010840047 [{I|L}P]TCS[QP]NANY;[{I|L}P]TCS[QP]NAGGY;[{I|L}P]TCS[QP]GGANY;[TP]DAN[WQ]VNY;[{I|L}P]CYKY[SG]NY;[TP]DA[DC]P{I|L}VNY;[TP]DA[DC]P{I|L}T{M(Oxidation (M))|F}K;[QP]WSVENANY;[TP]D{[C(Carbamidomethyl (C))E]|[WC]}P{I|L}VNY;[TP]W[DC]P{I|L}VNY 4.6933;3.9368;3.9368;3.8717;3.7922;3.7718;3.5925;3.4909;3.2268;3.2268 -;-;-;-;-;-;-;-;-;- 2551 1 2.278 220730.7 1.0 436 2803 3239 DOHH2_400M_050219_2,3241 DOHH2_400M_050219_2,3241,EESRPQNANY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3242 15.031 800.0 53881.0 25 0 2603.5 + -1 EMRECRCSPCC 11 73 772.7823403891667 1543.5501278451334 2 773.7853881716728 MULTI CID FTMS 0 0 0 3239 86609.3515625 0.964280554397972 2 -0.0633468627929687 3 4 Carbamidomethyl (C) _EMREC(Carbamidomethyl (C))RC(Carbamidomethyl (C))SPC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ REV__ENSG00000110799|ENST00000261405|VWF 0.3070304955306653 0.8736993455979228 2 Q 1 -1 11.259 0.0 0.0 0.72943 0.0 0.0 1397.4804847560692 0.0 1397.4804847560692 0.0 0.8014849593622468 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.72943 - 63 + 1 2.278 40328.0 0.7400000095367432 437 2803 3239 DOHH2_400M_050219_2,3242 DOHH2_400M_050219_2,3242,EMRECRCSPCC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3244 15.037 225.0 135810.0 25 0 35207.0 + -1 VGRQEMRK 8 59 510.27485612015937 1018.5351593071188 2 510.2756835818291 MULTI CID FTMS 0 0 0 3243 245557.5625 0.3210951321277054 15 -0.1746110916137695 1 Oxidation (M) _VGRQEM(Oxidation (M))RK_ REV__nc|ENSG00000112200|Q9Y4E5-4|ZNF451 2.577480529830294 0.808687252328423 2 K 1 -1 12.764 0.0 0.0 1.2532 0.0 0.0 872.4293376291876 0.0 872.4293376291876 0.0 12.764209843288905 0.0 0.0 0 0.0 0.0 0.0 0.0 K 1.2532 + + 5 + 1 2.278 30830.4 1.0 438 2804 3243 DOHH2_400M_050219_2,3244 DOHH2_400M_050219_2,3244,VGRQEMRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3245 15.051 800.0 169300.0 25 0 15182.0 + 26202 NQHVKSAL 8 138 448.75097895366383 895.4874049741277 2 448.7510253787041 MULTI CID FTMS 0 0 0 3243 177531.421875 1.0 0 0.0 2 Unmodified _NQHVKSAL_ ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 30.63653989081413 0.3996269429323407 2 {[QN]|[E{I|L}]|[KN]}HV[KS]A{I|L} 8 0 + 26.38 0.0 0.0 2.9459 2.9459 80.629 0.0 0.0 0.0 13.28131590713106 2.390690719683093 2.390690719683093 21.816529559367584 0 1.079689690656103 0.0 0.0 0.0 + + {[QN]|[E{I|L}]|[KN]}HV[KS]A{I|L};{NN|[MP]|[D{I|L}]|[EV]}RR{I|L}[HS] 2.9459;0.50964 +;- + 101 + 1 2.278 108364.2 0.7799999713897705 439 2804 3243 DOHH2_400M_050219_2,3245 DOHH2_400M_050219_2,3245,NQHVKSAL False True NQHVKSAL 15.051152 448.751025378704 579747.6875 3243.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B 5.568138122558594 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3247 15.069 800.0 151100.0 25 0 40554.0 + 8503 ETDRGMSAEY 10 114 587.7376045633664 1173.4606561935327 2 587.7376586794853 MULTI CID FTMS 0 0 0 3246 184058.09375 0.812626756079825 2 -0.0352544784545898 1 Oxidation (M) _ETDRGM(Oxidation (M))SAEY_ ENSG00000100347|ENST00000350028|SAMM50 63.960520009940105 0.0261970246776379 2 SAEY 4 6 43.488 0.0 0.0 3.7059 0.0 0.0 705.276601780884 0.0 705.276601780884 0.0 25.378559472270577 0.0 0.0 0 0.8494850021680094 0.0 1.1549471895720984 0.0 + SAEY 3.7059 + + 1384 1 2.264 94406.4 0.8100000023841858 440 2805 3246 DOHH2_400M_050219_2,3247 DOHH2_400M_050219_2,3247,ETDRGMSAEY True False ETDRGMSAEY 15.06855 587.737658679485 1546804.0 3246.0 ENSG00000100347|ENST00000350028|SAMM50 6.073598225911458 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3248 15.082 800.0 125840.0 25 0 45909.0 + -1 TMTTMLSCEM 10 95 590.2227893653057 1178.4310257974114 2 590.2227050662041 MULTI CID FTMS 0 0 0 3246 79213.96875 1.0 0 0.0 2 2 Oxidation (M) _TM(Oxidation (M))TTM(Oxidation (M))LSCEM_ REV__ENST00000367576.5_1_6:144167194-144167269:+|nuORF 6.723162845929126 0.6955379296933136 2 [{M(Oxidation (M))|F}T]A[{I|L}P]Y[CS]{M(Oxidation (M))|F}M 10 -1 [{M(Oxidation (M))|F}T]A[{I|L}P]Y[CS]{M(Oxidation (M))|F} + + 12.764 3.8605 0.37503 1.0832 1.0832 46.942 0.0 0.0 0.0 0.0 -5.194590330151847 -5.194590330151847 0.0 0 0.0 0.0 0.0 0.0 [{M(Oxidation (M))|F}T]A[{I|L}P]Y[CS]{M(Oxidation (M))|F}M 1.0832 - 193 + 1 2.264 79367.6 0.5099999904632568 441 2805 3246 DOHH2_400M_050219_2,3248 DOHH2_400M_050219_2,3248,TMTTMLSCEM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3251 15.096 384.0 248850.0 25 0 102250.0 -1 0 90 508.2945994780691 507.2873230114691 1 508.2955200076103 MULTI CID FTMS 0 0 0 3250 120226.71875 0.5914318019180674 3 -0.0554094314575195 1 2 W 1 -1 13.099 0.0 0.0 2.5822 0.0 0.0 303.1967296050222 0.0 303.1967296050222 0.0 5.026975159433532 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.5822 - 35 + 1 2.264 77748.3 1.0 442 2807 3250 DOHH2_400M_050219_2,3251 DOHH2_400M_050219_2,3251, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3252 15.109 800.0 136350.0 25 0 11123.0 + 26404 NTDPHSQEY 9 133 545.7253492305368 1089.4361455278736 2 545.7256347537041 MULTI CID FTMS 0 0 0 3250 116694.5546875 0.1379245068167301 11 -0.1150407791137695 2 Unmodified _NTDPHSQEY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 36.12702656103203 0.0967173616627612 2 {[QS]|[NT]}EHY[YT]Y 8 5 + 27.042 0.0 0.0 2.4822 2.4822 77.397 0.0 0.0 0.0 7.438294488928754 7.518862851274548 7.438294488928754 10.25099618100858 0 0.3252574989159953 1.154901959985743 0.2396518287104437 0.25 {[QS]|[NT]}EHY[YT]Y;[QT]DHY[YT]Y;[AG]TDHY[YT]Y;[AG]SEHY[YT]Y;AASDHY[YT]Y;{[ES]|[DT]|[{I|L}C]}QHY[YT]Y 2.4822;1.5413;1.2124;1.0671;1.0567;0.59382 -;-;-;-;-;- 1021 1 2.264 84703.4 0.6899999976158142 443 2807 3250 DOHH2_400M_050219_2,3252 DOHH2_400M_050219_2,3252,NTDPHSQEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3254 15.114 2.7 18230000.0 25 0 2792800.0 + -1 IQRLETMK 8 66 517.7862136552536 1033.5578743773071 2 517.7873412966728 MULTI CID FTMS 0 0 0 3253 19964660.0 0.1223186606767549 17 -0.2066612243652343 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 2 KTT[{I|L}P][WP]K 8 -1 50.378 0.0 0.0 4.8742 0.0 0.0 63.99659073009588 0.0 63.99659073009588 0.0 39.40864953451695 0.0 0.0 0 1.6861818737241734 0.0 1.3494850021680094 0.2396518287104437 KTT[{I|L}P][WP]K 4.8742 - 62 + 1 2.264 45269.8 1.0 444 2808 3253 DOHH2_400M_050219_2,3254 DOHH2_400M_050219_2,3254,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3255 15.128 800.0 102580.0 25 0 5142.7 + 2601 ASNVTNKTD 9 127 496.2382146678257 990.4618764024516 2 496.2392150759697 MULTI CID FTMS 0 0 0 3253 86954.140625 0.1625691633882511 -12 0.2589836120605469 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNVTNKTD_ ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 53.40400417844725 0.0329064971918313 2 {[CP]|[EA]}NVTNKTD 9 1 {[CP]|[EA]}N + + 41.648 10.859 3.4568 4.2049 4.2049 52.371 0.0 0.0 0.0 0.0 22.204999916446795 0.0 0.0 0 1.0 0.0 0.5796896906561032 0.4247425010840047 {[CP]|[EA]}NVTNKTD 4.2049 - 497 + 1 2.264 62895.3 0.449999988079071 445 2808 3253 DOHH2_400M_050219_2,3255 DOHH2_400M_050219_2,3255,ASNVTNKTD True False ASNVTNKTD 15.128183 496.23921507597 4076005.5 3253.0 nc|ENSG00000092199|P07910-3|HNRNPC;;nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;nc|ENSG00000092199|P07910|HNRNPC 8.010248184204102 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3257 15.136 187.0 414310.0 25 0 104780.0 + 28308 PRRPPPPPP 9 80 505.7985236524376 1009.5824943716752 2 505.7986022830009 MULTI CID FTMS 0 0 0 3256 287111.375 0.4630585896707027 18 -0.2107982635498047 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 42.09456458481378 0.0639583784996157 2 P[KT]PVHPP 8 5 33.938 0.0 0.0 3.3616 0.0 0.0 0.0 153.0783632867797 153.0783632867797 7.093056725713108 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 P[KT]PVHPP 3.3616 - 186 + 1 2.262 64429.6 1.0 446 2809 3256 DOHH2_400M_050219_2,3257 DOHH2_400M_050219_2,3257,PRRPPPPPP True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3258 15.142 327.0 160620.0 25 0 10265.0 + -1 HSQMLEAEK 9 105 544.755847681216 1087.497142429232 2 544.7556640505791 MULTI CID FTMS 0 0 0 3256 115972.0 1.0 0 0.0 2 Oxidation (M) _HSQM(Oxidation (M))LEAEK_ REV__ENSG00000030419|ENST00000434687|IKZF2;REV__ENST00000412444.5_1_2:213872086-213945912:-|nuORF;REV__ENST00000484040.1_1_2:213872086-213878776:-|nuORF;REV__nc|ENSG00000030419|Q9UKS7-2|IKZF2;REV__nc|ENSG00000030419|Q9UKS7-4|IKZF2;REV__nc|ENSG00000030419|Q9UKS7-7|IKZF2 15.847184025352805 0.4077185912009129 2 K 1 -1 16.195 0.0 0.0 1.4892 0.0 0.0 941.3910460930975 0.0 941.3910460930975 0.0 3.095597914511316 0.0 0.0 0 0.0 0.0 0.0 0.2215141619232908 K 1.4892 + + 290 + 1 2.262 47865.0 1.0 447 2809 3256 DOHH2_400M_050219_2,3258 DOHH2_400M_050219_2,3258,HSQMLEAEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3261 15.162 800.0 105580.0 25 0 19794.0 + -1 AAMTRAETNL 10 96 547.2675249647751 1092.5204969963502 2 547.2668945193291 MULTI CID FTMS 0 0 0 3260 78707.6875 0.7051646219664596 -3 0.0362415313720703 1 Oxidation (M) _AAM(Oxidation (M))TRAETNL_ REV__ENSG00000125912|ENST00000246117|NCLN;REV__nc|ENSG00000125912|Q969V3-2|NCLN 16.149105407346934 0.5765757077271437 2 VQ 2 -1 23.271 0.0 0.0 2.13 0.0 0.0 847.3829218080058 0.0 847.3829218080058 0.0 3.841349888432358 0.0 0.0 0 0.2302046884880938 0.0 0.0 0.0 VQ 2.13 - 175 1 2.262 72711.4 0.5699999928474426 448 2811 3260 DOHH2_400M_050219_2,3261 DOHH2_400M_050219_2,3261,AAMTRAETNL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3262 15.167 297.0 340730.0 25 0 88810.0 -1 0 64 434.2203913252011 433.2131148586011 1 434.2200805544853 MULTI CID FTMS 0 0 0 3260 153198.734375 0.7776817424123689 7 -0.0556497573852539 2 2 {[{M(Oxidation (M))|F}H]|[RQ]}M 3 -1 {[{M(Oxidation (M))|F}H]|[RQ]} + + 11.109 1.338 0.47087 2.5644 2.5644 48.115 0.0 0.0 0.0 0.0 -1.5668186536885305 -1.5668186536885305 0.0 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}M 2.5644 - 5 + 1 2.262 84681.1 1.0 449 2811 3260 DOHH2_400M_050219_2,3262 DOHH2_400M_050219_2,3262, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3263 15.176 510.0 210750.0 25 0 13113.0 24077 LYEELGLDSTS 11 115 409.532450467885 1225.5755220038552 3 409.5323058962822 MULTI CID FTMS 0 0 0 3260 103443.8828125 0.7974398340463876 5 -0.047616958618164 3 Unmodified _LYEELGLDSTS_ ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL 6.2057823575117 0.8458686499021061 2 Y 1 10 10.713 0.0 0.0 0.87415 0.0 0.0 1044.5018811120567 0.0 1044.5018811120567 0.0 0.7133375178436552 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.87415 + + 107 + 1 2.262 88697.6 1.0 450 2811 3260 DOHH2_400M_050219_2,3263 DOHH2_400M_050219_2,3263,LYEELGLDSTS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3266 15.185 83.0 910730.0 25 0 152500.0 + 17334 KLVMKLYMK 9 77 385.23193344196494 1152.6739709260949 3 385.2315551638603 MULTI CID FTMS 0 0 0 3265 363692.4375 0.7988600851044201 -6 0.0941791534423828 1 Unmodified _KLVMKLYMK_ REV__ENST00000302764.8_1_5:162880677-162880902:-|nuORF 3.944395688203298 0.7769873103969335 2 K{I|L} 2 -1 23.583 0.0 0.0 2.046 0.0 0.0 0.0 908.4702286064204 908.4702286064204 14.050602282293427 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.0 K{I|L} 2.046 + + 8 + 1 2.262 67538.8 1.0 451 2813 3265 DOHH2_400M_050219_2,3266 DOHH2_400M_050219_2,3266,KLVMKLYMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3274 15.225 800.0 124860.0 25 0 27428.0 + 17014 KKERPKRDP 9 108 577.3432447696657 1152.671936606131 2 577.3428222537041 MULTI CID FTMS 0 0 0 3273 64238.09375 0.7471385803680394 1 -0.0259313583374023 1 Unmodified _KKERPKRDP_ REV__ENSG00000128604|ENST00000357234|IRF5;REV__nc|ENSG00000128604|Q13568-3|IRF5;REV__nc|ENSG00000128604|Q13568-4|IRF5;REV__nc|ENSG00000128604|Q13568-5|IRF5;REV__nc|ENSG00000128604|Q13568|IRF5 7.289230182591677 0.6602208344931196 2 Q 1 -1 13.161 0.0 0.0 1.1418 0.0 0.0 1006.6023545522236 0.0 1006.6023545522236 0.0 1.1544082452903677 0.0 0.0 0 0.0 0.0 0.0 0.1171302707394362 Q 1.1418 - 106 + 1 2.262 77914.5 0.5299999713897705 452 2820 3273 DOHH2_400M_050219_2,3274 DOHH2_400M_050219_2,3274,KKERPKRDP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3275 15.235 541.0 120490.0 25 0 8417.1 + 5126 DIGSESTEDQ 10 115 540.7197913027163 1079.4250296722323 2 540.7191039919853 MULTI CID FTMS 0 0 0 3273 89037.78125 1.0 0 0.0 2 Unmodified _DIGSESTEDQ_ CON__P02662 41.8396318013385 0.1381409678234242 2 DQ 2 8 31.524 0.0 0.0 2.9204 0.0 0.0 818.328637925942 0.0 818.328637925942 0.0 7.967203307072737 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.75 + DQ 2.9204 + + 179 + 1 2.262 53549.2 1.0 453 2820 3273 DOHH2_400M_050219_2,3275 DOHH2_400M_050219_2,3275,DIGSESTEDQ False True DIGSESTEDQ 15.234895 540.719103991985 474423.875 3273.0 P02662 3.872888644536336 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 3278 15.244 86.0 1018300.0 25 0 125770.0 + 7571 EIKKRGIRV 9 72 366.9085547749845 1097.7038349251536 3 366.9085265994072 MULTI CID FTMS 0 0 0 3277 659008.5625 0.8139819186271058 -2 0.0299720764160156 1 Unmodified _EIKKRGIRV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 20.453626601364224 0.2830276176381075 2 {[QN]|[E{I|L}]|[KN]}KV 4 5 37.435 0.0 0.0 3.4103 0.0 0.0 0.0 625.3898804043453 625.3898804043453 26.839080598488128 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}KV 3.4103 - 55 + 1 2.262 74093.3 1.0 454 2822 3277 DOHH2_400M_050219_2,3278 DOHH2_400M_050219_2,3278,EIKKRGIRV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3279 15.254 593.0 229780.0 25 0 42961.0 + 38085 TPKEKAQAL 9 120 493.2867307987128 984.5589086642256 2 493.2873107790947 MULTI CID FTMS 0 0 0 3277 92787.171875 0.4019120126053437 -4 0.0378408432006835 2 Unmodified _TPKEKAQAL_ chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;ENSG00000148773|ENST00000368654|MKI67;ENSG00000148773|ENST00000368654|MKI67;nc|ENSG00000148773|P46013-2|MKI67;nc|ENSG00000148773|P46013-2|MKI67;nc|ENSG00000148773|P46013-2|MKI67 43.77239144664712 0.0547478964384323 2 TPKE 4 5 52.339 0.0 0.0 5.316 0.0 0.0 0.0 526.3016451471311 526.3016451471311 14.89731718102366 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.3494850021680094 + TPKE 5.316 + + 427 + 1 2.262 107535.9 1.0 455 2822 3277 DOHH2_400M_050219_2,3279 DOHH2_400M_050219_2,3279,TPKEKAQAL True True TPKEKAQAL 15.254139 493.287310779095 910112.3125 3277.0 nc|ENSG00000148773|P46013-2|MKI67;;ENSG00000148773|ENST00000368654|MKI67;;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67 5.518703142801921 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3280 15.259 241.0 344930.0 25 0 125260.0 -1 0 61 486.2524590380824 485.2451825714824 1 486.2520934939384 MULTI CID FTMS 0 0 0 3277 236405.28125 0.7462735493921668 -7 0.0499143600463867 3 2 {I|L} 1 -1 10.969 0.0 0.0 2.2605 0.0 0.0 354.1500420458949 0.0 354.1500420458949 0.0 -1.5051499783199065 -1.5051499783199065 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.2605 - 7 + 1 2.262 69989.8 1.0 456 2822 3277 DOHH2_400M_050219_2,3280 DOHH2_400M_050219_2,3280, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3281 15.268 524.0 135930.0 25 0 21905.0 + 45413 YTDENQHQY 9 93 599.2436607832036 1196.4727686332071 2 599.2446777224541 MULTI CID FTMS 0 0 0 3277 104380.03125 0.4042940739337121 -3 0.0338115692138671 4 Unmodified _YTDENQHQY_ ENSG00000164953|ENST00000453321|TMEM67 88.95385435242217 0.0153473310052057 2 YTDENQHQY 9 0 + 100.25 0.0 0.0 8.3787 8.3787 92.886 0.0 0.0 0.0 75.27909181880233 12.25268461881508 12.25268461881508 9.208187539523747 0 0.805462187404089 2.0 0.3807196863200844 1.7786596949921218 + + YTDENQHQY;YTDEGGQHQY;YTDEN[AG]HQY;YTDENQH[AG]Y;YTDEGG[AG]HQY;YTDEGGQH[AG]Y;YTDEN{[NV]|[RG]}D{NN|[MP]|[D{I|L}]|[EV]};YTDEN[AG]H[AG]Y;YTD{[HG]|PP}D{M(Oxidation (M))|F}D{NN|[MP]|[D{I|L}]|[EV]};YTDEV{NN|[MP]|[D{I|L}]|[EV]}D{NN|[MP]|[D{I|L}]|[EV]} 8.3787;7.6091;7.6091;7.317;6.8431;6.551;6.4002;6.3586;6.2553;6.1695 +;-;-;-;-;-;-;-;-;- + 919 + 1 2.262 58865.9 1.0 457 2822 3277 DOHH2_400M_050219_2,3281 DOHH2_400M_050219_2,3281,YTDENQHQY True True YTDENQHQY 15.267859 599.244677722454 1007303.5625 3277.0 ENSG00000164953|ENST00000453321|TMEM67 10.14104175567627 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3282 15.282 800.0 103940.0 25 0 8584.1 + 27286 PHIFDCLLSAN 11 95 615.3042946501993 1228.5940363671984 2 615.3049194216728 MULTI CID FTMS 0 0 0 3277 92976.5859375 0.5768123248686069 -3 0.0338115692138671 5 Unmodified _PHIFDCLLSAN_ REV__ENST00000424710.5_1_7:120496852-120497216:-|nuORF 38.17557092003332 0.2405003631267018 2 TPSQSAN 7 -1 80.883 0.0 0.0 6.5834 0.0 0.0 525.2660389630875 0.0 525.2660389630875 0.0 31.153991332217664 0.0 0.0 0 1.805462187404089 0.0 2.138210492164445 0.3494850021680094 TPSQSAN 6.5834 - 800 1 2.262 68689.0 0.4799999892711639 458 2822 3277 DOHH2_400M_050219_2,3282 DOHH2_400M_050219_2,3282,PHIFDCLLSAN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3284 15.298 800.0 170530.0 25 0 40379.0 + 7572 EIKKRGIRV 9 82 549.858746696721 1097.702940460242 2 549.8585082888603 MULTI CID FTMS 0 0 0 3283 63953.40234375 0.6688174099622969 -2 0.0467472076416015 1 Unmodified _EIKKRGIRV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 10.823927491677226 0.5436922275383211 2 KAAV 4 7 16.682 0.0 0.0 1.5198 0.0 0.0 710.4548207013687 0.0 710.4548207013687 0.0 1.987813446526232 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 KAAV 1.5198 - 28 1 2.262 108207.1 0.4799999892711639 459 2823 3283 DOHH2_400M_050219_2,3284 DOHH2_400M_050219_2,3284,EIKKRGIRV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3285 15.312 800.0 146220.0 25 0 26885.0 + 39617 VDNLDHEPEL 10 106 590.7757295948257 1179.5369062564514 2 590.7761108279228 MULTI CID FTMS 0 0 0 3283 125418.1015625 1.0 0 0.0 2 Unmodified _VDNLDHEPEL_ REV__ENSG00000115761|ENST00000381685|NOL10;REV__nc|ENSG00000115761|Q9BSC4-2|NOL10;REV__nc|ENSG00000115761|Q9BSC4-3|NOL10;REV__nc|ENSG00000115761|Q9BSC4-4|NOL10 32.78568957990786 0.2337485590374503 2 [DV]A[WY]A[DV]E{I|L} 10 -1 + 55.512 0.0 0.0 4.7062 4.7062 70.791 0.0 0.0 0.0 6.986133159171203 33.43093490986524 6.986133159171203 0.2422750325201406 0 1.7887254899964358 2.0 0.0 0.0 [DV]A[WY]A[DV]E{I|L};[DV]A[WY]AE[DV]{I|L};[DV][YE]QAE[DV]{I|L};[DV]{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}RE{I|L};[DV][YE]QERE{I|L};[DV][YE]QA[DV]E{I|L};[DV]A[WY]AE{I|L}[DV];[DV]A[WY]E[VG]E{I|L};[DV]A[WY]EA[DV]{I|L};[DV][YE]QEA[DV]{I|L} 4.7062;4.6857;4.3703;4.2173;4.2155;4.1151;4.1002;4.026;4.0054;3.6901 -;-;-;-;-;-;-;-;-;- 760 1 2.262 90527.9 0.550000011920929 460 2823 3283 DOHH2_400M_050219_2,3285 DOHH2_400M_050219_2,3285,VDNLDHEPEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3288 15.321 70.0 677950.0 25 0 104170.0 + 33425 SHVVVKND 8 76 470.248535071801 938.482517210402 2 470.2475158572197 MULTI CID FTMS 0 0 0 3287 581808.125 0.9888990493155098 1 -0.0189790725708007 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SHVVVKND_ ENSG00000067048|ENST00000336079|DDX3Y;ENST00000493363.1_1_Y:15016814-15021353:+|nuORF;nc|ENSG00000067048|O15523-3|DDX3Y 55.50274090549119 0.1141693163797808 2 EHVVVK[DN] 8 1 + 71.583 0.0 0.0 7.6276 7.6276 95.057 0.0 0.0 0.0 63.62449708633612 7.856668758921828 7.856668758921828 17.677739965467865 0 1.924742501084005 0.9208187539523752 0.0 1.055462187404089 EHVVVK[DN];EHVVH[YR];VV[{M(Oxidation (M))|F}E]VV[{M(Oxidation (M))|F}T];VVV[{M(Oxidation (M))|F}E]V[{M(Oxidation (M))|F}T];[PG][YK]KV[{M(Oxidation (M))|F}T] 7.6276;5.7439;1.5014;1.1332;0.96015 -;-;-;-;- 162 + 1 2.265 42515.4 1.0 461 2825 3287 DOHH2_400M_050219_2,3288 DOHH2_400M_050219_2,3288,SHVVVKND True False SHVVVKND 15.320703 470.24751585722 2118107.75 3287.0 ENSG00000067048|ENST00000336079|DDX3Y;;ENST00000493363.1_1_Y:15016814-15021353:+|nuORF;;nc|ENSG00000067048|O15523-3|DDX3Y 11.23465061187744 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3289 15.335 800.0 150380.0 25 0 36078.0 -1 TYIHLLAMK 9 100 553.3053003367096 1104.596047740219 2 553.3048583865166 MULTI CID FTMS 0 0 0 3287 111065.8125 1.0 0 0.0 2 Oxidation (M) _TYIHLLAM(Oxidation (M))K_ ENSG00000146005|ENST00000274710|PSD2 32.30548876998284 0.1201446275138228 2 KTAT[{I|L}P][WP]K 9 -1 54.865 0.0 0.0 4.967 0.0 0.0 63.99854815412329 0.0 63.99854815412329 0.0 40.172495517581325 0.0 0.0 0 1.5189301784845295 0.0 1.805462187404089 0.6549471895720985 KTAT[{I|L}P][WP]K 4.967 - 585 + 1 2.265 95752.3 0.5699999928474426 462 2825 3287 DOHH2_400M_050219_2,3289 DOHH2_400M_050219_2,3289,TYIHLLAMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3292 15.355 800.0 139900.0 25 0 43844.0 -1 0 111 532.2916108289916 531.2843343623915 1 532.2928954958916 MULTI CID FTMS 0 0 0 3291 55450.4609375 0.2990409164759406 -49 0.8408126831054688 1 2 P 1 -1 13.099 0.0 0.0 2.4655 0.0 0.0 416.2206269422728 0.0 416.2206269422728 0.0 1.148481219398079 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.4655 - 40 + 1 2.265 90047.1 0.5199999809265137 463 2827 3291 DOHH2_400M_050219_2,3292 DOHH2_400M_050219_2,3292, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3293 15.359 213.0 341690.0 25 0 82536.0 + 2005 APARPAPAA 9 77 411.2351999287444 820.4558469242888 2 411.2354919314384 MULTI CID FTMS 0 0 0 3291 147243.90625 0.380944315310763 -13 0.1538505554199218 2 Unmodified _APARPAPAA_ REV__ENSG00000125533|ENST00000612929|BHLHE23;REV__nc|ENSG00000125533|Q8NDY6|BHLHE23 21.74664581756881 0.2544899275067181 2 [PA]{[QV]|[N{I|L}]|[RA]|[KV]}PAPAA 9 -1 + 32.769 0.0 0.0 3.994 3.994 77.402 0.0 0.0 0.0 9.687586472142748 21.509808757669887 9.687586472142748 8.010299956639805 0 0.6069758080123702 1.3979400086720375 0.0 0.0 [PA]{[QV]|[N{I|L}]|[RA]|[KV]}PAPAA;[PA]{[QV]|[N{I|L}]|[RA]|[KV]}PPAAA;[PA]{[QV]|[N{I|L}]|[RA]|[KV]}[HK]AA 3.994;3.0177;0.6765 +;-;- + 37 1 2.265 60464.9 1.0 464 2827 3291 DOHH2_400M_050219_2,3293 DOHH2_400M_050219_2,3293,APARPAPAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3294 15.37 615.0 177290.0 25 0 10543.0 + 490 AEGPDHHSL 9 131 481.720559123548 961.426565313896 2 481.7210571169853 MULTI CID FTMS 0 0 0 3291 82573.2578125 0.1432363184583925 -14 0.158635139465332 3 Unmodified _AEGPDHHSL_ ENST00000345523.8_1_19:51302184-51307950:-|nuORF;ENST00000593287.5_1_19:51302549-51307836:-|nuORF;ENST00000595794.5_1_19:51302184-51305576:-|nuORF 88.90359156742426 0.0153595091083554 2 AEGPDHHS{I|L} 9 0 + 80.875 0.0 0.0 8.412 8.412 94.884 0.0 0.0 0.0 43.53076880544919 15.164252385751098 15.164252385751098 12.165762445130497 0 0.7302046884880937 2.0 2.1791746928241125 0.0 + + AEGPDHHS{I|L};AEG[WY]HS{I|L};AEG[W{I|L}]HSY;AEG{[ET]|[MV]}HRY;AET{[DA]|[EG]}HRY;AEG[HS][W{I|L}]Y;AEG[HS][WY]{I|L};[PG][HD]HS{I|L}EA;AEG[W{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}N;AEG{[ET]|[MV]}[WR]N 8.412;7.1466;5.5803;5.4503;5.4178;4.7233;4.5934;4.1556;4.0592;4.0116 +;-;-;-;-;-;-;-;-;- + 1035 + 1 2.265 89234.0 1.0 465 2827 3291 DOHH2_400M_050219_2,3294 DOHH2_400M_050219_2,3294,AEGPDHHSL True True AEGPDHHSL 15.370071 481.721057116985 6233014.0 3291.0 ENST00000595794.5_1_19:51302184-51305576:-|nuORF;;ENST00000345523.8_1_19:51302184-51307950:-|nuORF;;ENST00000593287.5_1_19:51302549-51307836:-|nuORF 7.719232082366943 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3296 15.375 11.0 5229800.0 25 0 882470.0 + -1 IQRLETMK 8 73 517.7862136552536 1033.5578743773071 2 517.7869140505791 MULTI CID FTMS 0 0 0 3295 4978081.5 0.0304995057175895 37 -0.8276033401489258 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 2 KTT[{I|L}P][WP]K 8 -1 48.294 0.0 0.0 4.6726 0.0 0.0 63.997319978121205 0.0 63.997319978121205 0.0 29.872118693881543 0.0 0.0 0 1.2302046884880935 0.0 1.274227503252014 0.2614393726401688 KTT[{I|L}P][WP]K 4.6726 - 133 + 1 2.265 49643.5 1.0 466 2828 3295 DOHH2_400M_050219_2,3296 DOHH2_400M_050219_2,3296,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3297 15.384 499.0 112600.0 25 0 6017.6 -1 ASNVTNKTD 9 110 496.2382146678257 990.4618764024516 2 496.2387267947197 MULTI CID FTMS 0 0 0 3295 107389.09375 0.2007742817360513 8 -0.0713558197021484 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNVTNKTD_ ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 33.4449034751529 0.1114409586740657 2 VTNKTD 6 -1 36.482 0.0 0.0 3.6834 0.0 0.0 314.1238769901452 0.0 314.1238769901452 0.0 22.55571607740464 0.0 0.0 0 1.0 0.0 0.4361818737241735 0.3807196863200844 VTNKTD 3.6834 + + 297 + 1 2.265 48150.1 1.0 467 2828 3295 DOHH2_400M_050219_2,3297 DOHH2_400M_050219_2,3297,ASNVTNKTD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3299 15.39 228.0 313450.0 25 0 64981.0 28290 PRPPRPPPP 9 72 505.7985236524376 1009.5824943716752 2 505.7984802126884 MULTI CID FTMS 0 0 0 3298 203135.65625 0.3276209815614504 38 -0.8418169021606445 1 Unmodified _PRPPRPPPP_ ENST00000604081.1_1_12:54388338-54389007:-|nuORF;REV__ENST00000230859.7_2_5:6713731-6713803:+|nuORF 34.10243960390752 0.1078313939113124 2 RPR{[HG]|PP}PP{[HG]|PP} 9 2 + 33.407 0.0 0.0 3.309 3.309 71.525 0.0 0.0 0.0 19.761584145730644 5.6424927368726046 5.6424927368726046 4.24742501084005 0 1.5044321917401078 0.0 0.0 0.0 RPR{[HG]|PP}PP{[HG]|PP};PRR{[HG]|PP}PP{[HG]|PP};RPR[YK]P{[HG]|PP};RPR{[HG]|PP}P[YK];PRR[YK]P{[HG]|PP};PRR{[HG]|PP}P[YK];RPR[YK][YK];PRR[YK][YK];R{[VA]|[{I|L}G]}[VP]GH{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};P[KT][RH]P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.309;2.8883;2.6673;2.4702;2.2466;2.0495;1.8353;1.4146;1.4024;1.1771 -;-;-;-;-;-;-;-;-;- 202 + 1 2.265 62533.8 1.0 468 2829 3298 DOHH2_400M_050219_2,3299 DOHH2_400M_050219_2,3299,PRPPRPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3300 15.404 800.0 24465.0 25 0 9875.8 -1 0 27 1047.4130708070056 3139.217383021217 3 1047.748706042767 MULTI CID FTMS 0 0 0 3298 73336.0625 0.6311403032520781 -7 0.144658088684082 2 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.22266 0.0 0.0 1621.5735364409422 1367.549815080529 2989.1233515214712 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.22266 - 1 + 1 2.265 29401.7 0.3499999940395355 469 2829 3298 DOHH2_400M_050219_2,3300 DOHH2_400M_050219_2,3300, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3304 15.429 800.0 130210.0 25 0 10445.0 -1 0 58 628.7851131392588 2511.111346690635 4 629.0352050662041 MULTI CID FTMS 0 0 0 3303 43205.578125 0.2044889770429969 -8 0.1003055572509765 1 2 D 1 -1 20.797 0.0 0.0 0.82819 0.0 0.0 1667.746485619028 725.3161338098678 2393.062619428896 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 D 0.82819 - 9 + 1 2.265 84518.1 0.4699999988079071 470 2832 3303 DOHH2_400M_050219_2,3304 DOHH2_400M_050219_2,3304, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3307 15.437 96.0 842760.0 25 0 230080.0 7008 EEKEDGRRW 9 81 402.1948161012434 1203.5626189039303 3 402.1947204470634 MULTI CID FTMS 0 0 0 3306 349184.34375 0.8541134449326896 -2 0.0204057693481445 1 Unmodified _EEKEDGRRW_ ENSG00000140299|ENST00000607373|BNIP2;ENST00000560458.5_1_15:59970098-59981480:-|nuORF;nc|ENSG00000140299|Q12982-2|BNIP2 5.296884461304476 0.7297726132274777 2 ED 2 7 10.969 0.0 0.0 0.91139 0.0 0.0 386.1813360283712 570.290018925648 956.4713549540191 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + ED 0.91139 + + 9 + 1 2.265 67007.0 1.0 471 2834 3306 DOHH2_400M_050219_2,3307 DOHH2_400M_050219_2,3307,EEKEDGRRW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3310 15.458 800.0 104290.0 25 0 6737.9 + -1 HSQMLEAEK 9 122 544.7564844618784 1087.4984159905566 2 544.7565185427666 MULTI CID FTMS 0 0 0 3309 66469.5078125 0.4856049565386235 -1 0.004033088684082 1 Oxidation (M) _HSQM(Oxidation (M))LEAEK_ REV__ENSG00000030419|ENST00000434687|IKZF2;REV__ENST00000412444.5_1_2:213872086-213945912:-|nuORF;REV__ENST00000484040.1_1_2:213872086-213878776:-|nuORF;REV__nc|ENSG00000030419|Q9UKS7-2|IKZF2;REV__nc|ENSG00000030419|Q9UKS7-4|IKZF2;REV__nc|ENSG00000030419|Q9UKS7-7|IKZF2 15.847184025352805 0.4077185912009129 2 VEK 3 -1 24.961 0.0 0.0 2.2952 0.0 0.0 713.281907056766 0.0 713.281907056766 0.0 4.224993806787722 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.25 VEK 2.2952 - 398 + 1 2.265 68215.8 0.5099999904632568 472 2836 3309 DOHH2_400M_050219_2,3310 DOHH2_400M_050219_2,3310,HSQMLEAEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3311 15.472 800.0 107730.0 25 0 18102.0 -1 ESTCCQEKC 9 102 601.2157695280979 1200.4169861229957 2 601.7172119021416 MULTI CID FTMS 0 0 0 3309 91791.5859375 0.3800069692442477 -6 0.0370960235595703 2 3 Carbamidomethyl (C) _ESTC(Carbamidomethyl (C))C(Carbamidomethyl (C))QEKC(Carbamidomethyl (C))_ ENSG00000212658|ENST00000391353|KRTAP29-1 15.847184025352805 0.4077185912009129 2 PNNGY 5 -1 24.602 0.0 0.0 2.0495 0.0 0.0 637.1813264295495 0.0 637.1813264295495 0.0 12.238284789799106 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.6989700043360187 PNNGY 2.0495 - 148 + 1 2.265 65135.7 0.5199999809265137 473 2836 3309 DOHH2_400M_050219_2,3311 DOHH2_400M_050219_2,3311,ESTCCQEKC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3314 15.492 800.0 189830.0 25 0 24577.0 + -1 KTGKYFYMK 9 109 591.3043330368552 1180.5941131405102 2 591.3047363162041 MULTI CID FTMS 0 0 0 3313 158847.59375 0.3793371692997611 -9 0.0920219421386718 1 Oxidation (M) _KTGKYFYM(Oxidation (M))K_ REV__ENST00000371432.7_1_6:45515222-45515519:+|nuORF 17.11289562659939 0.3734572693229295 2 KT{M(Oxidation (M))|F}T[{I|L}P][WP]K 9 -1 45.509 0.0 0.0 3.8548 0.0 0.0 63.9986974668496 0.0 63.9986974668496 0.0 25.81650434776093 0.0 0.0 0 1.3703715150305282 0.0 1.305462187404089 0.2887254899964357 KT{M(Oxidation (M))|F}T[{I|L}P][WP]K 3.8548 - 669 + 1 2.265 116494.0 0.6000000238418579 474 2838 3313 DOHH2_400M_050219_2,3314 DOHH2_400M_050219_2,3314,KTGKYFYMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3315 15.496 201.0 254440.0 25 0 19249.0 + 34609 SPKMKSQQFT 10 80 394.5385384355296 1180.5937859067888 3 394.5388366580009 MULTI CID FTMS 0 0 0 3313 109568.140625 0.2888053808937646 -11 0.1367473602294922 2 Unmodified _SPKMKSQQFT_ REV__ENSG00000125107|ENST00000317147|CNOT1;REV__nc|ENSG00000125107|A5YKK6-4|CNOT1 5.731851221503515 0.7001233259664787 2 {M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 4 -1 12.706 0.0 0.0 1.0762 0.0 0.0 639.3706050979259 0.0 639.3706050979259 0.0 1.908782771825792 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 {M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 1.0762 - 79 + 1 2.265 49306.8 1.0 475 2838 3313 DOHH2_400M_050219_2,3315 DOHH2_400M_050219_2,3315,SPKMKSQQFT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3317 15.505 384.0 298070.0 25 0 37254.0 + 5551 DMKYKNRV 8 131 351.85508346984244 0 351.8548156619072 PEAK CID FTMS 0 0 0 3316 94155.828125 0.9598717340560384 1 -0.0310544967651367 1 Unmodified _DMKYKNRV_ ENSG00000171703|ENST00000343484|TCEA2;ENSG00000187735|ENST00000521604|TCEA1;ENST00000395053.7_1_20:62701563-62701860:+|nuORF;ENST00000465111.5_1_20:62701563-62703530:+|nuORF;ENST00000477783.5_1_20:62701125-62703530:+|nuORF;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;nc|ENSG00000171703|Q15560-2|TCEA2;nc|ENSG00000187735|P23193-2|TCEA1 24.020572477871973 0.3419822013253964 2 K 1 7 6.1092 0.0 0.0 0.87064 0.0 0.0 186.3779574369059 384.2011761516492 570.5791335885551 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 + K 0.87064 + + 13 + 1 2.265 95252.3 1.0 476 2839 3316 DOHH2_400M_050219_2,3317 DOHH2_400M_050219_2,3317,DMKYKNRV False True DMKYKNRV 15.505291 351.854815661907 364932.40625 3316.0 ENST00000395053.7_1_20:62701563-62701860:+|nuORF;;ENST00000477783.5_1_20:62701125-62703530:+|nuORF;;ENSG00000187735|ENST00000521604|TCEA1;;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;;ENSG00000171703|ENST00000343484|TCEA2;;nc|ENSG00000171703|Q15560-2|TCEA2;;nc|ENSG00000187735|P23193-2|TCEA1;;ENST00000465111.5_1_20:62701563-62703530:+|nuORF 5.316410541534424 3.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3318 15.513 439.0 230130.0 25 0 70216.0 -1 0 80 475.247332086884 474.240055620284 1 475.2473937869072 MULTI CID FTMS 0 0 0 3316 99876.9609375 0.593859389641222 12 -0.1961421966552734 2 2 QQS{I|L} 4 -1 + 21.427 0.0 0.0 4.5181 4.5181 77.293 0.0 0.0 0.0 5.228787452803374 10.006691753861308 5.228787452803374 6.020599913279625 0 0.0 0.0 0.0 0.0 QQS{I|L};[{I|L}T]{[QN]|[E{I|L}]|[KN]} 4.5181;3.2486 -;- 36 + 1 2.265 85120.4 1.0 477 2839 3316 DOHH2_400M_050219_2,3318 DOHH2_400M_050219_2,3318, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3319 15.527 800.0 145720.0 25 0 10798.0 -1 0 71 632.7837364170385 2527.105839801754 4 632.7839843630791 MULTI CID FTMS 0 0 0 3316 77327.7578125 0.9002138495529787 -1 0.0201959609985351 3 2 DD 2 -1 22.206 0.0 0.0 0.87872 0.0 0.0 1683.7399017141645 610.3067622297006 2294.0466639438646 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 DD 0.87872 - 33 + 1 2.265 93012.1 0.4600000083446502 478 2839 3316 DOHH2_400M_050219_2,3319 DOHH2_400M_050219_2,3319, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3322 15.54 380.0 187010.0 25 0 10801.0 + 35238 SSDVSHQEY 9 89 526.2197402007997 1050.4249274683991 2 526.2199584841728 MULTI CID FTMS 0 0 0 3321 172742.421875 0.139394036517998 -10 0.1225957870483398 1 Unmodified _SSDVSHQEY_ ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1 93.16586880292088 0.0136995152735431 2 {[CA]|SS}DVSHQEY 9 0 + 65.657 0.0 0.0 6.2505 6.2505 79.578 0.0 0.0 0.0 7.147642715192504 2.218487496163561 2.218487496163561 2.218487496163561 0 1.9291746928241125 0.0 0.8494850021680094 1.1549471895720984 + + {[CA]|SS}DVSHQEY;{[CA]|SS}DVSH[YE]Q;{[CA]|SS}DVHM[{M(Oxidation (M))|F}T]Q;[AG]HSEVD{[CA]|SS}Y;[AG]HESVD{[CA]|SS}Y;{[CA]|SS}[Y{M(Oxidation (M))|F}]QQEY;[HS]QEVD{[CA]|SS}Y;[HQ]SEVD{[CA]|SS}Y;[AG]HS[DV]E{[CA]|SS}Y;{[CA]|SS}[Y{M(Oxidation (M))|F}]Q[YE]Q 6.2505;6.0393;5.5416;3.2957;2.436;2.4177;2.414;2.2951;2.2515;2.2065 +;-;-;-;-;-;-;-;-;- + 975 + 1 2.265 59129.1 1.0 479 2841 3321 DOHH2_400M_050219_2,3322 DOHH2_400M_050219_2,3322,SSDVSHQEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3323 15.544 164.0 484060.0 25 0 86070.0 -1 0 46 503.2291867390598 2511.109551362299 5 503.4298583865166 MULTI CID FTMS 0 0 0 3321 196019.125 0.9859320345407204 1 -0.0264244079589843 2 2 {I|L}D 2 -1 14.068 0.0 0.0 0.56023 0.0 0.0 1705.6857975554617 574.2846163385374 2279.9704138939987 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 {I|L}D 0.56023 - 8 + 1 2.265 68847.9 1.0 480 2841 3321 DOHH2_400M_050219_2,3323 DOHH2_400M_050219_2,3323, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3324 15.557 800.0 186830.0 25 0 14106.0 + 29263 QHLNSYYDPN 10 119 625.7734650167762 1249.5323771003525 2 625.7738525271416 MULTI CID FTMS 0 0 0 3321 181306.921875 0.5482858923551834 -4 0.0593204498291015 3 Unmodified _QHLNSYYDPN_ REV__ENSG00000171806|ENST00000310392|METTL18 41.95555342248728 0.1369168616057562 2 [AG]ANGGGGGA{[VA]|[{I|L}G]}GGDY 16 -1 + 77.185 0.0 0.0 6.1771 6.1771 77.458 0.0 0.0 0.0 0.793972170671239 0.793972170671239 0.793972170671239 0.6888128940781257 0 1.3411290632962718 1.5228787452803376 0.2887254899964357 0.0 [AG]ANGGGGGA{[VA]|[{I|L}G]}GGDY;[AG]ANGGGGG[Q{I|L}]GGDY;[AG]ANGGGGQ{[VA]|[{I|L}G]}GGDY;[AG]ANGGGGGA{[VA]|[{I|L}G]}NDY;[DP]N{I|L}{I|L}[CS]PGGDY;[AG]ANGGGGG[Q{I|L}]NDY;[AG]ANGGGGQ{[VA]|[{I|L}G]}NDY;[AG]ANGGGNA{[VA]|[{I|L}G]}GGDY;[AG]ANGGGN[Q{I|L}]GGDY;[AG]ANGGGNA{[VA]|[{I|L}G]}NDY 6.1771;6.122;6.122;6.1184;6.1136;6.0649;6.0649;6.022;5.9684;5.9649 -;-;-;-;-;-;-;-;-;- 11583 + 1 2.265 116337.5 0.7200000286102295 481 2841 3321 DOHH2_400M_050219_2,3324 DOHH2_400M_050219_2,3324,QHLNSYYDPN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3326 15.565 169.0 194830.0 25 0 16937.0 -1 0 46 575.6159957498319 1723.8261578496954 3 575.6159545779228 MULTI CID FTMS 0 0 0 3325 268286.5 0.8276294216935695 -7 0.1199817657470703 1 2 SYED 4 -1 25.93 0.0 0.0 1.5042 0.0 0.0 1211.6499207957563 0.0 1211.6499207957563 0.0 11.95046257204389 0.0 0.0 0 0.5484550065040281 0.0 0.4247425010840047 0.0 SYED 1.5042 - 23 1 2.271 33657.5 1.0 482 2842 3325 DOHH2_400M_050219_2,3326 DOHH2_400M_050219_2,3326, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3327 15.569 245.0 287150.0 25 0 21473.0 -1 0 102 351.1928136006439 350.1855371340439 1 351.1910278201103 MULTI CID FTMS 0 0 0 3325 75266.265625 0.7462834486522781 12 -0.2255029678344726 2 2 Y 1 -1 11.42 0.0 0.0 3.2611 0.0 0.0 169.11148425494076 0.0 169.11148425494076 0.0 1.331339447023847 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.2611 - 18 + 1 2.271 61853.0 1.0 483 2842 3325 DOHH2_400M_050219_2,3327 DOHH2_400M_050219_2,3327, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3330 15.59 800.0 197930.0 25 0 23644.0 + -1 VQIAWLTMK 9 133 553.3051677563222 1104.5957825794444 2 553.3046142458916 MULTI CID FTMS 0 0 0 3329 154908.3125 0.4844235992946683 -6 0.0974931716918945 1 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 34.40172386719151 0.1061884637610825 2 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 55.48 0.0 0.0 5.0227 5.0227 86.51 0.0 0.0 0.0 2.797633993969981 37.81620601977153 2.797633993969981 15.580371765640416 0 1.8807196863200843 0.0 1.174742501084005 0.4802046884880938 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[{I|L}P][RD]{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]TT{[CA]|SS};[KT][RD][{I|L}P]GVGY;{[DS]|[MA]|[CV]|TT}KAAP{I|L}E{M(Oxidation (M))|F}K;{[DS]|[MA]|[CV]|TT}K[{I|L}P]AAE{M(Oxidation (M))|F}K;{[DS]|[MA]|[CV]|TT}K[{I|L}P][RD]{M(Oxidation (M))|F}K;[KG][RD]{I|L}{I|L}E{M(Oxidation (M))|F}K;[KT]T[{I|L}P]T[WM]K 5.0227;3.6121;2.7558;2.614;2.3541;2.2881;2.09;1.7712;1.5644;1.2384 -;-;-;-;-;-;-;-;-;- 536 1 2.271 123267.2 0.6200000047683716 484 2844 3329 DOHH2_400M_050219_2,3330 DOHH2_400M_050219_2,3330,VQIAWLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3331 15.597 418.0 138010.0 25 0 7923.4 + 6219 DTNADKQL 8 104 452.72204862282126 903.4295443124424 2 452.7219421267509 MULTI CID FTMS 0 0 0 3329 119415.8515625 0.394306678652791 -8 0.1317338943481445 2 Unmodified _DTNADKQL_ ENSG00000163220|ENST00000368738|S100A9 65.23502041540118 0.1164516490932339 2 {[ES]|[DT]|[{I|L}C]}NA 4 4 22.039 0.0 0.0 2.4395 0.0 0.0 0.0 499.2532747858032 499.2532747858032 8.36696871556164 0.0 0.0 0.0 0 1.0356668758921828 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}NA 2.4395 + + 196 + 1 2.271 48930.8 1.0 485 2844 3329 DOHH2_400M_050219_2,3331 DOHH2_400M_050219_2,3331,DTNADKQL True True DTNADKQL 15.596987 452.721942126751 4371315.5 3329.0 ENSG00000163220|ENST00000368738|S100A9 4.515862147013347 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3334 15.609 281.0 354080.0 25 0 195690.0 -1 0 64 472.2728119118361 471.2655354452361 1 472.2729980349541 MULTI CID FTMS 0 0 0 3333 329787.65625 0.5750839122297204 19 -0.5966529846191406 1 2 {[QN]|[E{I|L}]|[KN]}V 3 -1 7.2358 0.0 0.0 1.5354 0.0 0.0 0.0 127.03806287127044 127.03806287127044 7.235834254131108 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}V 1.5354 - 6 1 2.271 82590.1 1.0 486 2846 3333 DOHH2_400M_050219_2,3334 DOHH2_400M_050219_2,3334, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3335 15.612 177.0 246330.0 25 0 65149.0 6205 DTGSLNAASL 10 47 474.7349487163996 0 474.7347900271416 PEAK CID FTMS 0 0 0 3333 130022.75 0.8874590595155812 4 -0.0869417190551757 2 Unmodified _DTGSLNAASL_ nc|ENSG00000172478|Q08AI8-3|MAB21L4 9.38312468134398 0.3794934366477728 2 S 1 9 6.9897 0.0 0.0 0.73773 0.0 0.0 729.3286640570196 128.07195459537346 857.4006186523931 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + S 0.73773 + + 15 + 1 2.271 42555.3 1.0 487 2846 3333 DOHH2_400M_050219_2,3335 DOHH2_400M_050219_2,3335,DTGSLNAASL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 3337 15.617 114.0 436630.0 25 0 34880.0 + 491 AEGPDHHSL 9 75 481.720559123548 961.426565313896 2 481.7207824587822 MULTI CID FTMS 0 0 0 3336 433767.59375 0.7524381965937181 6 -0.1266107559204101 1 Unmodified _AEGPDHHSL_ ENST00000345523.8_1_19:51302184-51307950:-|nuORF;ENST00000593287.5_1_19:51302549-51307836:-|nuORF;ENST00000595794.5_1_19:51302184-51305576:-|nuORF 39.957323273325 0.0756908302845263 2 [PG]DHHS{I|L}EA 9 4 + 47.066 0.0 0.0 4.8955 4.8955 85.893 0.0 0.0 0.0 4.778930903698182 32.65616992822601 4.778930903698182 15.55152475400671 0 0.0 0.8538719643217619 0.4247425010840047 0.0 [PG]DHHS{I|L}EA;[TA]E[DV]D{I|L}EA;{[DA]|[EG]}[HT][YV]WA;{[DA]|[EG]}[HT][YR]EA;{[CP]|[EA]}T[DV]D{I|L}EA;[TA][HD][YR]EA;[TA][HD][YV]WA;[WE]{NN|[MP]|[D{I|L}]|[EV]}S{I|L}EA;{[CP]|[EA]}[HS][YV]WA;{[CP]|[EA]}[HS][YR]EA 4.8955;3.2779;3.1452;3.1452;3.0889;2.9661;2.9661;2.872;2.7771;2.7771 -;-;-;-;-;-;-;-;-;- 526 1 2.271 43119.2 1.0 488 2847 3336 DOHH2_400M_050219_2,3337 DOHH2_400M_050219_2,3337,AEGPDHHSL True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3338 15.631 800.0 122530.0 25 0 15712.0 + 32846 SEGYPGKRY 9 101 528.7589565076353 1055.5033600820705 2 528.7596313357353 MULTI CID FTMS 0 0 0 3336 114683.984375 0.3852234159615655 -8 0.1162834167480468 2 Unmodified _SEGYPGKRY_ ENSG00000182199|ENST00000328923|SHMT2;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 46.020951573049366 0.0490941689151868 2 {[ES]|[DT]|[{I|L}C]}GYP 5 4 29.08 0.0 0.0 2.7551 0.0 0.0 0.0 519.2677150955792 519.2677150955792 18.701702663714705 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}GYP 2.7551 + + 72 + 1 2.271 77658.1 0.5199999809265137 489 2847 3336 DOHH2_400M_050219_2,3338 DOHH2_400M_050219_2,3338,SEGYPGKRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3340 15.636 37.0 1658500.0 25 0 245670.0 + -1 IQRLETMK 8 66 517.7862136552536 1033.5578743773071 2 517.7868530154228 MULTI CID FTMS 0 0 0 3339 1486060.5 0.0091047345682134 57 -1.0640153884887695 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 2 T{M(Oxidation (M))|F}K 3 -1 40.49 0.0 0.0 3.9175 0.0 0.0 639.3685802935518 0.0 639.3685802935518 0.0 23.578409410397462 0.0 0.0 0 1.305462187404089 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.9175 + + 89 1 2.271 52253.5 1.0 490 2848 3339 DOHH2_400M_050219_2,3340 DOHH2_400M_050219_2,3340,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3341 15.639 181.0 375880.0 25 0 93369.0 + 2148 APYERRAM 8 79 497.2501883561667 992.4858237791334 2 497.2499572634697 MULTI CID FTMS 0 0 0 3339 285752.0 0.4378312679818877 -4 0.0579328536987304 2 Unmodified _APYERRAM_ ENSG00000130255|ENST00000347512|RPL36 19.438996006549623 0.6237395211498085 2 M{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VT 5 8 22.218 0.0 0.0 2.2387 0.0 0.0 0.0 383.1766756647094 383.1766756647094 9.097112500669269 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VT 2.2387 - 60 + 1 2.271 59176.9 1.0 491 2848 3339 DOHH2_400M_050219_2,3341 DOHH2_400M_050219_2,3341,APYERRAM False True APYERRAM 15.639378 497.24995726347 2319645.0 3339.0 ENSG00000130255|ENST00000347512|RPL36 4.630466461181641 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3342 15.643 167.0 482810.0 25 0 65482.0 + 16680 KENRELEKI 9 95 386.88751243816097 1157.640707914683 3 386.8873779177666 MULTI CID FTMS 0 0 0 3339 307482.8125 0.2147378737684509 -5 0.0619697570800781 3 Unmodified _KENRELEKI_ ENSG00000204681|ENST00000377034|GABBR1;nc|ENSG00000204681|Q9UBS5-2|GABBR1;nc|ENSG00000204681|Q9UBS5-3|GABBR1;nc|ENSG00000204681|Q9UBS5-4|GABBR1 26.268140514670165 0.1969607489560049 2 {[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}E{I|L}E{I|L}K 9 4 + 51.536 0.0 0.0 4.4518 4.4518 83.079 0.0 0.0 0.0 4.646942222687173 32.54670763117608 4.646942222687173 11.506375246153908 0 0.0 2.0 0.2887254899964357 0.6307196863200843 {[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}E{I|L}E{I|L}K;{[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}{M(Oxidation (M))|F}{I|L}[HS]K;{[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}{M(Oxidation (M))|F}[HS]{I|L}K;K{I|L}{M(Oxidation (M))|F}{I|L}[RN]{[CA]|SS}{[HG]|PP};K{I|L}{M(Oxidation (M))|F}[YR][YR]{I|L};{I|L}K{M(Oxidation (M))|F}{I|L}[RN]{[CA]|SS}{[HG]|PP};K{I|L}{M(Oxidation (M))|F}[YR][HV][VP];{I|L}K{M(Oxidation (M))|F}[YR][YR]{I|L};{I|L}K{M(Oxidation (M))|F}[YR][HV][VP] 4.4518;3.4579;3.091;2.725;2.0034;1.8121;1.8071;1.5225;1.3262 -;-;-;-;-;-;-;-;- 223 1 2.271 71526.2 1.0 492 2848 3339 DOHH2_400M_050219_2,3342 DOHH2_400M_050219_2,3342,KENRELEKI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3343 15.656 800.0 132680.0 25 0 13715.0 + 16633 KEIEDRQKL 9 102 579.8276396953415 1157.640726457483 2 579.8271972537041 MULTI CID FTMS 0 0 0 3339 84827.2578125 0.2184024468082624 -5 0.0619697570800781 4 Unmodified _KEIEDRQKL_ ENSG00000132467|ENST00000254803|UTP3 67.08073823543168 0.0222274355215578 2 {I|L}SG{I|L}ED 6 7 61.621 0.0 0.0 5.323 0.0 0.0 0.0 540.3261125722325 540.3261125722325 31.399451679612 0.0 0.0 0.0 0 1.4124379954164592 1.6989700043360187 0.9247425010840048 0.0 {I|L}SG{I|L}ED 5.323 - 193 + 1 2.271 83704.5 0.4799999892711639 493 2848 3339 DOHH2_400M_050219_2,3343 DOHH2_400M_050219_2,3343,KEIEDRQKL True True KEIEDRQKL 15.656478 579.827197253704 1628978.75 3339.0 ENSG00000132467|ENST00000254803|UTP3 4.833178997039795 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3345 15.669 564.0 129920.0 25 0 16186.0 -1 EKKLQNTMK 9 105 568.310410964533 1134.606268995866 2 568.3106567263603 MULTI CID FTMS 0 0 0 3344 82047.5703125 0.1434072626874342 -31 0.4553365707397461 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 2 TT{M(Oxidation (M))|F}K 4 -1 41.587 0.0 0.0 3.6653 0.0 0.0 639.371746160361 0.0 639.371746160361 0.0 16.086812544029456 0.0 0.0 0 0.805462187404089 0.0 0.7614393726401688 0.0 TT{M(Oxidation (M))|F}K 3.6653 - 263 1 2.271 61252.8 1.0 494 2849 3344 DOHH2_400M_050219_2,3345 DOHH2_400M_050219_2,3345,EKKLQNTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3346 15.674 283.0 269040.0 25 0 22775.0 + 416 AEEKEDGRRW 10 84 425.87418630279217 1274.6007295085765 3 425.8738586306572 MULTI CID FTMS 0 0 0 3344 198461.21875 0.3724017381518275 -5 0.083322525024414 2 Unmodified _AEEKEDGRRW_ ENSG00000140299|ENST00000607373|BNIP2;ENST00000560458.5_1_15:59970098-59981480:-|nuORF;nc|ENSG00000140299|Q12982-2|BNIP2 43.9818466556824 0.1155196613165264 2 AEEKED 6 4 78.448 0.0 0.0 6.1547 0.0 0.0 0.0 570.2910339523985 570.2910339523985 68.9719299268606 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.8494850021680094 0.0 + AEEKED 6.1547 + + 254 + 1 2.271 68035.3 1.0 495 2849 3344 DOHH2_400M_050219_2,3346 DOHH2_400M_050219_2,3346,AEEKEDGRRW True True AEEKEDGRRW 15.674115 425.873858630657 5213522.0 3344.0 ENST00000560458.5_1_15:59970098-59981480:-|nuORF;;nc|ENSG00000140299|Q12982-2|BNIP2;;ENSG00000140299|ENST00000607373|BNIP2 6.464567502339681 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3347 15.688 800.0 64492.0 25 0 5107.1 + -1 EWMKEEQEQMM 11 87 757.798338570408 1513.5821242076158 2 757.7988769412041 MULTI CID FTMS 0 0 0 3344 84361.3359375 0.8393210844634459 -2 0.0443363189697265 3 Oxidation (M) _EWM(Oxidation (M))KEEQEQMM_ REV__ENSG00000273976|ENST00000614055|GOLGA6L1;REV__ENSG00000277322|ENST00000619213|GOLGA6L6;REV__ENSG00000277865|ENST00000622895|GOLGA6L22;REV__ENST00000567652.1_3_15:28798864-28806522:+|nuORF;REV__nc|ENSG00000227717|P0DX01|GOLGA6L25;REV__nc|ENSG00000237850|P0DX00|GOLGA6L24;REV__nc|ENSG00000273756|P0DX02|GOLGA6L26 8.155526934196011 0.8366696279279818 2 GGSY{[CP]|[EA]}GSGYSG[HC] 14 -1 92.221 0.0 0.0 6.0929 0.0 0.0 183.0648670880875 0.0 183.0648670880875 0.0 50.528419686577806 0.0 0.0 0 0.7302046884880937 0.0 2.841129063296272 0.0 GGSY{[CP]|[EA]}GSGYSG[HC] 6.0929 - 6625 1 2.271 43025.5 0.4399999976158142 496 2849 3344 DOHH2_400M_050219_2,3347 DOHH2_400M_050219_2,3347,EWMKEEQEQMM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3350 15.697 83.0 719190.0 25 0 68041.0 + 30484 REEDGHTHQW 10 83 432.1901492447768 1293.5486183345304 3 432.1898071169853 MULTI CID FTMS 0 0 0 3349 434941.34375 0.7541932187151843 -2 0.0355224609375 1 Unmodified _REEDGHTHQW_ ENSG00000127337|ENST00000247843|YEATS4;ENST00000552949.1_1_12:69753653-69756720:+|nuORF 19.62595529434964 0.5182375435722777 2 [WE]VDGHTHQW 10 2 + 45.812 0.0 0.0 3.5416 3.5416 76.755 0.0 0.0 0.0 3.177418734074564 31.832750158095 3.177418734074564 9.084850188786504 0 0.0 0.0 0.5 0.0 [WE]VDGHTHQW;[HT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGHTHQ{[DA]|[EG]};[WE]VDGHTH[AG]W;{[CT]|[{M(Oxidation (M))|F}G]}QHTHGG[HM]W;[HT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NHTHQ{[DA]|[EG]};{[CT]|[{M(Oxidation (M))|F}G]}QHTHN[HM]W;[HT]{[CA]|SS}{[CA]|SS}HTHQW;[WE]P{[CA]|SS}HTHQW;[HT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGHTH[AG][VS];{[CT]|[{M(Oxidation (M))|F}G]}[AG]HTHGG[HM]W 3.5416;2.8393;2.8331;2.6616;2.3281;2.1533;2.1402;2.1369;2.1359;1.9559 -;-;-;-;-;-;-;-;-;- 364 1 2.271 51543.0 1.0 497 2851 3349 DOHH2_400M_050219_2,3350 DOHH2_400M_050219_2,3350,REEDGHTHQW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3351 15.711 800.0 117540.0 25 0 7187.1 + 30485 REEDGHTHQW 10 92 647.7818634282507 1293.5491739233014 2 647.7822753787041 MULTI CID FTMS 0 0 0 3349 109448.3828125 0.8110883065062406 -2 0.0355224609375 2 Unmodified _REEDGHTHQW_ ENSG00000127337|ENST00000247843|YEATS4;ENST00000552949.1_1_12:69753653-69756720:+|nuORF 44.391923383255 0.1130657680819667 2 [WE][DV]GHTHQW 10 2 + 62.483 0.0 0.0 4.8304 4.8304 81.915 0.0 0.0 0.0 2.2526405213950795 48.05848105229167 2.2526405213950795 9.164539485499256 0 1.95597718523608 0.0 0.7059771852360797 0.0 [WE][DV]GHTHQW;[WE][DV]GHTH[AG]W;WE[DV]GHTHQW;[WE]P{[CA]|SS}HTHQW;WE[PG]E[EP]HQW;[WE]P[WP]EHQW;WEPW[EP]HQW;[WE]PD[PA]EHQW;[WE]P{[CA]|SS}HTH[AG]W;{[CT]|[{M(Oxidation (M))|F}G]}QHTH[WM][HN] 4.8304;4.1219;4.0351;3.9774;3.5904;3.4183;3.3315;3.3217;3.2689;3.0372 -;-;-;-;-;-;-;-;-;- 549 1 2.271 72069.9 0.5299999713897705 498 2851 3349 DOHH2_400M_050219_2,3351 DOHH2_400M_050219_2,3351,REEDGHTHQW True True REEDGHTHQW 15.710959 647.782275378704 3521635.625 3349.0 ENST00000552949.1_1_12:69753653-69756720:+|nuORF;;ENSG00000127337|ENST00000247843|YEATS4 8.026264667510986 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3353 15.725 575.0 69892.0 25 0 7491.9 + 26111 NPNGDDDDPQD 11 85 601.2157695280979 1200.4169861229957 2 601.2158080935478 MULTI CID FTMS 0 0 0 3352 89197.71875 0.2023826371903489 9 -0.3402729034423828 1 Unmodified _NPNGDDDDPQD_ REV__ENSG00000136044|ENST00000258530|APPL2;REV__nc|ENSG00000136044|Q8NEU8-2|APPL2;REV__nc|ENSG00000136044|Q8NEU8-3|APPL2 8.745405648335112 0.8338865417133445 2 GY 2 -1 20.969 0.0 0.0 1.7468 0.0 0.0 962.320823258541 0.0 962.320823258541 0.0 -0.5854562117252016 -0.5854562117252016 0.0 0 0.0 0.0 0.0 0.0 GY 1.7468 - 100 + 1 2.275 34483.5 1.0 499 2852 3352 DOHH2_400M_050219_2,3353 DOHH2_400M_050219_2,3353,NPNGDDDDPQD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3354 15.739 800.0 68942.0 25 0 5999.2 + + 29918 QSESETAGSTKY 12 93 644.2873385524098 1286.5601241716197 2 644.2863036990166 MULTI CID FTMS 0 0 0 3352 90152.7578125 1.0 0 0.0 2 Unmodified _QSFYWHWPH_ nc|ENSG00000124486|Q93008-3|USP9X;ENSG00000124486|ENST00000378308|USP9X 16.942295170755138 0.3780752226737986 2 QSESETAGSTKY 12 -1 + 89.472 0.0 0.0 6.9544 6.9544 87.057 0.0 0.0 0.0 57.39577516576787 12.096364499506464 12.096364499506464 6.611814434466183 0 0.2742275032520141 1.0457574905606752 0.0 0.0 QSESETAGSTKY;QSESETQSTKY;QSE[WM]AGSTKY;QSESE[C(Carbamidomethyl (C))R]TKY;QSESETAG[WR]H;QSESET[C(Carbamidomethyl (C))R]KY;QSE[WM]QSTKY;QSESETQ[WR]H;QS{[NV]|[RG]}S{[C(Carbamidomethyl (C))G]|[NC]}GSTKY;[AG][QA]TS{[C(Carbamidomethyl (C))G]|[NC]}GSTKY 6.9544;6.4404;5.217;5.0767;5.0048;4.9399;4.7059;4.4937;4.4104;3.9228 -;-;-;-;-;-;-;-;-;- 743 + 1 2.275 50352.8 0.4799999892711639 500 2852 3352 DOHH2_400M_050219_2,3354 DOHH2_400M_050219_2,3354,QSFYWHWPH False False QSESETAGSTKY 15.738761 644.286303699017 312064.09375 3352.0 nc|ENSG00000124486|Q93008-3|USP9X;;ENSG00000124486|ENST00000378308|USP9X 7.323642094930013 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3356 15.747 302.0 299240.0 25 0 39419.0 + -1 HYLLLMTMK 9 82 591.3043330368552 1180.5941131405102 2 591.3044311404228 MULTI CID FTMS 0 0 0 3355 248726.75 0.5939737521150166 6 -0.1938257217407226 1 2 Oxidation (M) _HYLLLM(Oxidation (M))TM(Oxidation (M))K_ REV__ENSG00000137497|ENST00000393695|NUMA1;REV__ENST00000534971.1_1_11:71733276-71735881:-|nuORF;REV__ENST00000534987.5_1_11:71728600-71747007:-|nuORF;REV__nc|ENSG00000137497|Q14980-2|NUMA1;REV__nc|ENSG00000137497|Q14980-3|NUMA1;REV__nc|ENSG00000137497|Q14980-4|NUMA1;REV__nc|ENSG00000137497|Q14980-5|NUMA1 14.838274106304384 0.4350285940865338 2 T{M(Oxidation (M))|F}K[HV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 8 -1 33.237 0.0 0.0 2.8153 0.0 0.0 128.09533888984532 0.0 128.09533888984532 0.0 6.989700043360188 0.0 0.0 0 0.7742275032520141 0.0 0.7614393726401688 0.0 T{M(Oxidation (M))|F}K[HV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 2.8153 - 522 1 2.275 73984.1 1.0 501 2853 3355 DOHH2_400M_050219_2,3356 DOHH2_400M_050219_2,3356,HYLLLMTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3357 15.755 473.0 176440.0 25 0 18522.0 + 14593 IIDHHDNTY 9 127 564.2595724610122 1126.5045919888244 2 564.2603637576103 MULTI CID FTMS 0 0 0 3355 151086.796875 0.1949858345447075 -4 0.0822744369506836 2 Unmodified _IIDHHDNTY_ ENSG00000196924|ENST00000369850|FLNA;nc|ENSG00000196924|P21333-2|FLNA 125.52916310638032 0.0024920486013546 2 {I|L}{I|L}DH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D 7 5 80.956 0.0 0.0 7.1865 0.0 0.0 0.0 271.0950106256469 271.0950106256469 30.90065519814349 0.0 0.0 0.0 0 0.930884548956689 2.0 1.1382104921644451 1.5044321917401078 {I|L}{I|L}DH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D 7.1865 - 1376 + 1 2.275 64294.4 1.0 502 2853 3355 DOHH2_400M_050219_2,3357 DOHH2_400M_050219_2,3357,IIDHHDNTY True True IIDHHDNTY 15.755225 564.26036375761 7102243.5 3355.0 ENSG00000196924|ENST00000369850|FLNA;;nc|ENSG00000196924|P21333-2|FLNA 8.740254402160645 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3358 15.769 800.0 235480.0 25 0 29670.0 + + 14982 IIGKKGESV 9 146 465.7844009682991 929.554249003398 2 465.7848388552666 MULTI CID FTMS 0 0 0 3355 131116.953125 0.2566816574039033 -4 0.0822744369506836 3 Unmodified _ILQIKTTN_ nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000197111|Q15366-7|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 28.486842064014134 0.4448922141344407 2 {I|L}{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GKGG 9 -1 54.319 0.0 0.0 5.8435 0.0 0.0 0.0 68.05134760074452 68.05134760074452 40.538493697485805 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.0 {I|L}{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GKGG 5.8435 - 842 + 1 2.275 148483.6 0.5400000214576721 503 2853 3355 DOHH2_400M_050219_2,3358 DOHH2_400M_050219_2,3358,ILQIKTTN False False IIGKKGESV 15.76904 465.784838855267 2370092.75 3355.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000197111|Q15366-7|PCBP2;;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 3.8232250213623047 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3359 15.783 800.0 137140.0 25 0 37882.0 + 418 AEEKEDGRRW 10 68 638.3075620269492 1274.6005711206983 2 638.3074828982353 MULTI CID FTMS 0 0 0 3355 114468.0390625 1.0 0 0.0 4 Unmodified _AEEKEDGRRW_ ENSG00000140299|ENST00000607373|BNIP2;ENST00000560458.5_1_15:59970098-59981480:-|nuORF;nc|ENSG00000140299|Q12982-2|BNIP2 17.44264345198275 0.5548713957087773 2 V[RN]W 4 8 16.427 0.0 0.0 1.2888 0.0 0.0 701.2876134475162 0.0 701.2876134475162 0.0 3.979400086720373 0.0 0.0 0 0.5 0.0 0.0 0.0 V[RN]W 1.2888 - 34 1 2.275 84905.8 0.5400000214576721 504 2853 3355 DOHH2_400M_050219_2,3359 DOHH2_400M_050219_2,3359,AEEKEDGRRW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3361 15.789 205.0 251930.0 25 0 14611.0 + 24312 MDTPLPPPGRT 11 90 394.5385384355296 1180.5937859067888 3 394.5385619997978 MULTI CID FTMS 0 0 0 3360 107568.3828125 0.2835343156603863 5 -0.1497049331665039 1 Unmodified _MDTPLPPPGRT_ REV__ENSG00000164077|ENST00000296473|MON1A;REV__nc|ENSG00000164077|Q86VX9|MON1A 4.897010918128616 0.8520435188433833 2 P{I|L} 2 -1 15.969 0.0 0.0 1.3526 0.0 0.0 429.2352786819825 538.1995627550397 967.4348414370222 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 P{I|L} 1.3526 + + 36 + 1 2.275 49139.8 1.0 505 2854 3360 DOHH2_400M_050219_2,3361 DOHH2_400M_050219_2,3361,MDTPLPPPGRT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3362 15.793 200.0 315540.0 25 0 50817.0 -1 MMMLQNIL 8 74 505.2478112511369 1008.4810695690738 2 505.2476074099541 MULTI CID FTMS 0 0 0 3360 165429.90625 1.0 0 0.0 2 Oxidation (M) _M(Oxidation (M))MMLQNIL_ ENSG00000173226|ENST00000310864|IQCB1;nc|ENSG00000173226|Q15051-2|IQCB1;nc|ENSG00000173226|Q15051-3|IQCB1 5.230669730166228 0.792582437072536 2 N 1 -1 4.6041 0.0 0.0 0.45654 0.0 0.0 522.2304192788748 369.1786593072876 891.4090785861624 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.45654 + + 31 + 1 2.275 54524.7 1.0 506 2854 3360 DOHH2_400M_050219_2,3362 DOHH2_400M_050219_2,3362,MMMLQNIL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3363 15.802 507.0 224070.0 25 0 40733.0 + 35478 STMSTNGIPR 10 98 532.263110102333 1062.511667271466 2 532.2623168826103 MULTI CID FTMS 0 0 0 3360 100696.09375 0.2973862880627961 -3 0.0908727645874023 3 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 70.33199760932243 0.018925923965799 2 {[MG]|[TS]}MSTNG{I|L}RP 10 2 + 69.774 0.0 0.0 6.5669 6.5669 80.907 0.0 0.0 0.0 7.269987279362624 2.430380486862944 2.430380486862944 2.430380486862944 0 0.8807196863200843 0.0 0.805462187404089 0.3807196863200844 {[MG]|[TS]}MSTNG{I|L}RP;{[MG]|[TS]}MSTNG{I|L}PR;{[MG]|[TS]}MSTGGG{I|L}RP;{[MG]|[TS]}MSTGGG{I|L}PR;{[MG]|[TS]}MS[KA]{[DA]|[EG]}RP;{[MG]|[TS]}MS[KA]{[DA]|[EG]}PR;{[MG]|[TS]}MST[KG][HS]K;{[MG]|[TS]}MS[KA]S[HS]K;{[MG]|[TS]}M[{I|L}V]{[HG]|PP}M{[MG]|[TS]};{[MS]|[{M(Oxidation (M))|F}A]}T[{I|L}V]{[HG]|PP}M{[MG]|[TS]} 6.5669;6.3382;5.7044;5.4756;3.7962;3.5674;2.9058;2.8146;2.7654;2.3151 -;+;-;-;-;-;-;-;-;- + 470 + 1 2.275 90233.6 1.0 507 2854 3360 DOHH2_400M_050219_2,3363 DOHH2_400M_050219_2,3363,STMSTNGIPR True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3365 15.807 82.0 501270.0 25 0 36712.0 + 35239 SSDVSHQEY 9 82 526.2197402007997 1050.4249274683991 2 526.2199584841728 MULTI CID FTMS 0 0 0 3364 628454.8125 0.5071299344577203 4 -0.1305179595947265 1 Unmodified _SSDVSHQEY_ ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1 72.96794272382148 0.0199516581995792 2 {[CA]|SS}DVSH[YE]Q 9 2 + 53.126 0.0 0.0 5.0576 5.0576 88.412 0.0 0.0 0.0 32.26280941356464 19.48174920559176 19.48174920559176 29.50827206916173 0 0.8494850021680094 0.0 0.5 1.1549471895720984 {[CA]|SS}DVSH[YE]Q;{[CA]|SS}[Y{M(Oxidation (M))|F}]Q[YE]Q;{[CA]|SS}D[Y{M(Oxidation (M))|F}][RN]Y;[AG]HSVD{[CA]|SS}EY;{[CA]|SS}[Y{M(Oxidation (M))|F}]D[RN]Y;[Y{M(Oxidation (M))|F}]{[CA]|SS}Q[YE]Q;[AG]HSV{[C(Carbamidomethyl (C))E]|[WC]}EY;[HS]QVD{[CA]|SS}EY;[HS]QV{[C(Carbamidomethyl (C))E]|[WC]}EY;{[CA]|SS}D[Y{M(Oxidation (M))|F}][HQ][PA] 5.0576;2.2484;2.0621;1.2451;1.1993;1.1532;1.0775;0.98178;0.81928;0.7748 -;-;-;-;-;-;-;-;-;- 362 + 1 2.275 38193.4 1.0 508 2855 3364 DOHH2_400M_050219_2,3365 DOHH2_400M_050219_2,3365,SSDVSHQEY True True SSDVSHQEY 15.806852 526.219958484173 13017687.0 3364.0 nc|ENSG00000105856|O60381-3|HBP1;;ENSG00000105856|ENST00000222574|HBP1;;nc|ENSG00000105856|O60381-2|HBP1 8.98710028330485 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3366 15.818 664.0 163030.0 25 0 26662.0 + 29644 QNCDQFEK 8 106 534.7244904508569 1067.4344279685138 2 534.7248412966728 MULTI CID FTMS 0 0 0 3364 119327.984375 0.9002820619913952 -2 0.0633077621459961 2 Carbamidomethyl (C) _QNC(Carbamidomethyl (C))DQFEK_ CON__P02769 60.07390631473393 0.1152413078224327 2 {[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))DQ{M(Oxidation (M))|F}EK 8 0 + 57.331 0.0 0.0 5.3709 5.3709 85.719 0.0 0.0 0.0 23.240064480635404 19.662355562743272 19.662355562743272 9.262137858390815 0 0.5189301784845296 0.0 0.7742275032520141 0.3252574989159953 + + {[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))DQ{M(Oxidation (M))|F}EK;{[QN]|[E{I|L}]|[KN]}[CG]DQ{M(Oxidation (M))|F}EK;{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))D[AG]{M(Oxidation (M))|F}EK;{[QN]|[E{I|L}]|[KN]}[CG]D[AG]{M(Oxidation (M))|F}EK;{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))DQ{M(Oxidation (M))|F}[SG]{I|L};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))DQ[Q{I|L}]Y;{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))D[AG]{M(Oxidation (M))|F}[SG]{I|L};{[QN]|[E{I|L}]|[KN]}[CG]DQ{M(Oxidation (M))|F}[SG]{I|L};[AG]DCGNQE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))DQ[YQ]{I|L} 5.3709;4.5032;4.5032;3.6405;2.8888;2.3022;2.0262;2.0262;1.9295;1.8386 +;-;-;-;-;-;-;-;-;- + 346 + 1 2.275 86329.4 1.0 509 2855 3364 DOHH2_400M_050219_2,3366 DOHH2_400M_050219_2,3366,QNCDQFEK True False False False contaminant PXD020620_cell_line DOHH2_400M_050219_2 3367 15.823 251.0 386520.0 25 0 27183.0 + 19252 LEKEARRQL 9 107 381.5594977999896 1141.6566640001688 3 381.5591003298759 MULTI CID FTMS 0 0 0 3364 232251.03125 0.8966995161439583 -1 0.0191869735717773 3 Unmodified _LEKEARRQL_ ENSG00000172361|ENST00000398545|CFAP53 19.361941925380144 0.3125782356748823 2 E{I|L} 2 7 28.583 0.0 0.0 2.5037 0.0 0.0 881.5190330287733 0.0 881.5190330287733 0.0 17.78659694992122 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 E{I|L} 2.5037 - 39 1 2.275 82433.6 1.0 510 2855 3364 DOHH2_400M_050219_2,3367 DOHH2_400M_050219_2,3367,LEKEARRQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3368 15.832 521.0 148200.0 25 0 24456.0 + 8514 ETEDPNDNRY 10 84 626.7571219203815 1251.4996909075628 2 626.7573730349541 MULTI CID FTMS 0 0 0 3364 141979.0 0.7413133662546472 -2 0.0633077621459961 4 Unmodified _ETEDPNDNRY_ ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3 53.40400417844725 0.0601721406801337 2 [DP]E[QP]NPDE 9 7 70.155 0.0 0.0 5.6057 0.0 0.0 0.0 227.06980918980108 227.06980918980108 47.715973736463184 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 1.274227503252014 0.7742275032520141 [DP]E[QP]NPDE 5.6057 - 807 1 2.275 63734.5 1.0 511 2855 3364 DOHH2_400M_050219_2,3368 DOHH2_400M_050219_2,3368,ETEDPNDNRY True True ETEDPNDNRY 15.832277 626.757373034954 957471.1875 3364.0 nc|ENSG00000105409|P13637-2|ATP1A3;;nc|ENSG00000105409|P13637-3|ATP1A3;;ENSG00000105409|ENST00000648268|ATP1A3 9.307725588480633 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3370 15.84 286.0 340130.0 25 0 43685.0 + -1 VQIAWLTMK 9 93 553.3051677563222 1104.5957825794444 2 553.3050414919853 MULTI CID FTMS 0 0 0 3369 285710.75 0.8934641894842096 6 -0.2453994750976562 1 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 18.1463463914782 0.3454829746528889 2 [KT][RD][{I|L}P]TTK 9 -1 44.159 0.0 0.0 3.9978 0.0 0.0 0.0 60.97508852275783 60.97508852275783 27.60984977102048 0.0 0.0 0.0 0 1.5 0.0 2.079689690656103 0.0 [KT][RD][{I|L}P]TTK 3.9978 - 257 1 2.275 77560.7 1.0 512 2856 3369 DOHH2_400M_050219_2,3370 DOHH2_400M_050219_2,3370,VQIAWLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3371 15.844 178.0 459720.0 25 0 41285.0 + 32848 SEGYPGKRY 9 103 352.84175568946125 1055.5034376685835 3 352.8418762087822 MULTI CID FTMS 0 0 0 3369 253343.3125 0.8877274182647685 1 -0.0420475006103515 2 Unmodified _SEGYPGKRY_ ENSG00000182199|ENST00000328923|SHMT2;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 15.847184025352805 0.4077185912009129 2 {I|L} 1 9 11.99 0.0 0.0 1.1359 0.0 0.0 924.408464989676 0.0 924.408464989676 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1359 - 86 + 1 2.275 72357.0 1.0 513 2856 3369 DOHH2_400M_050219_2,3371 DOHH2_400M_050219_2,3371,SEGYPGKRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3372 15.847 157.0 597720.0 25 0 66240.0 + 31119 RLLQRKQM 8 88 358.2187539111452 1071.6344323336357 3 358.2182189822197 MULTI CID FTMS 0 0 0 3369 281243.25 1.0 0 0.0 3 Unmodified _RLLQRKQM_ ENSG00000138326|ENST00000372360|RPS24;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;ENST00000473603.1_1_11:33258589-33258820:+|nuORF;ENST00000478655.5_1_10:79793659-79797065:+|nuORF;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;nc|ENSG00000138326|P62847-3|RPS24;nc|ENSG00000138326|P62847-4|RPS24;nc|ENSG00000138326|P62847|RPS24 12.531546534597751 0.7257836412119636 2 M 1 7 15.485 0.0 0.0 1.4449 0.0 0.0 922.5831150502356 0.0 922.5831150502356 0.0 -3.7236374744834713 -3.7236374744834713 0.0 0 0.0 0.0 0.0 0.0 + M 1.4449 + + 15 + 1 2.275 80000.0 1.0 514 2856 3369 DOHH2_400M_050219_2,3372 DOHH2_400M_050219_2,3372,RLLQRKQM False True RLLQRKQM 15.846626 358.21821898222 1498856.375 3369.0 ENST00000478655.5_1_10:79793659-79797065:+|nuORF;;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;;ENSG00000138326|ENST00000372360|RPS24;;nc|ENSG00000138326|P62847|RPS24;;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;;ENST00000473603.1_1_11:33258589-33258820:+|nuORF;;nc|ENSG00000138326|P62847-4|RPS24;;nc|ENSG00000138326|P62847-3|RPS24 2.0207459529240928 3.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3373 15.86 800.0 85524.0 25 0 29103.0 -1 0 30 1144.445143640308 3430.3136015211244 3 1144.780566394329 MULTI CID FTMS 0 0 0 3369 139707.109375 0.193706501229582 -4 0.1213188171386718 4 2 E 1 -1 6.9897 0.0 0.0 0.20376 0.0 0.0 2774.0828969790264 524.1635836236936 3298.24648060272 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20376 - 4 + 1 2.275 66628.3 0.4399999976158142 515 2856 3369 DOHH2_400M_050219_2,3373 DOHH2_400M_050219_2,3373, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3374 15.874 800.0 81754.0 25 0 3891.8 -1 MKPKMKYSTN 10 94 630.3113459556301 1258.6081389780602 2 630.8119994997978 MULTI CID FTMS 0 0 0 3369 88545.1875 1.0 0 0.0 5 2 Oxidation (M) _M(Oxidation (M))KPKM(Oxidation (M))KYSTN_ ENSG00000137033|ENST00000682010|IL33;ENST00000463336.1_1_9:6241694-6242202:+|nuORF;nc|ENSG00000137033|O95760-2|IL33;nc|ENSG00000137033|O95760-3|IL33;nc|ENSG00000137033|O95760-4|IL33 32.78568957990786 0.2337485590374503 2 STN 3 -1 43.857 0.0 0.0 3.4845 0.0 0.0 938.4746378567696 0.0 938.4746378567696 0.0 14.648415687162952 0.0 0.0 0 0.8494850021680094 0.0 0.7302046884880937 0.4247425010840047 STN 3.4845 + + 251 + 1 2.275 56317.3 0.4699999988079071 516 2856 3369 DOHH2_400M_050219_2,3374 DOHH2_400M_050219_2,3374,MKPKMKYSTN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3376 15.882 276.0 192080.0 25 0 13164.0 + 6220 DTNADKQL 8 97 452.72204862282126 903.4295443124424 2 452.7220947146416 MULTI CID FTMS 0 0 0 3375 212288.625 0.7009691053930749 5 -0.2033519744873047 1 Unmodified _DTNADKQL_ ENSG00000163220|ENST00000368738|S100A9 49.93300154707207 0.1395624531867191 2 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L} 8 0 {[ES]|[DT]|[{I|L}C]} + + 39.36 7.5308 3.4853 4.3567 4.3567 52.953 0.0 0.0 0.0 0.0 29.310771249906225 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.8252574989159953 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L} 4.3567 + + 342 + 1 2.275 47498.4 1.0 517 2857 3375 DOHH2_400M_050219_2,3376 DOHH2_400M_050219_2,3376,DTNADKQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3377 15.896 800.0 172280.0 25 0 78301.0 -1 0 111 472.2729188987773 471.2656424321773 1 472.2732116580009 MULTI CID FTMS 0 0 0 -1 0 2 2 {[QN]|[E{I|L}]|[KN]}V 3 -1 26.483 0.0 0.0 5.6196 0.0 0.0 0.0 127.03591155743044 127.03591155743044 14.16386562212267 0.0 0.0 0.0 0 0.0 2.0 0.0 0.2302046884880938 {[QN]|[E{I|L}]|[KN]}V 5.6196 - 49 1 2.275 110975.3 0.6200000047683716 518 2857 3375 DOHH2_400M_050219_2,3377 DOHH2_400M_050219_2,3377, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3379 15.901 102.0 522270.0 25 0 75457.0 + -1 IQRLETMK 8 58 517.7863733372224 1033.5581937412446 2 517.7868530154228 MULTI CID FTMS 0 0 0 3378 447971.59375 0.159607040274741 -6 0.1848354339599609 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 2 T{M(Oxidation (M))|F}K 3 -1 32.536 0.0 0.0 3.148 0.0 0.0 639.3700966726884 0.0 639.3700966726884 0.0 21.10924374808178 0.0 0.0 0 1.0 0.0 0.0 0.2614393726401688 T{M(Oxidation (M))|F}K 3.148 + + 71 + 1 2.275 46693.2 1.0 519 2858 3378 DOHH2_400M_050219_2,3379 DOHH2_400M_050219_2,3379,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3380 15.91 512.0 196210.0 25 0 28804.0 + 32847 SEGYPGKRY 9 90 528.7589565076353 1055.5033600820705 2 528.7590820193291 MULTI CID FTMS 0 0 0 3378 202565.734375 0.680418147119338 3 -0.1554374694824218 2 Unmodified _SEGYPGKRY_ ENSG00000182199|ENST00000328923|SHMT2;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 43.85829265575387 0.0542763391141878 2 {[ES]|[DT]|[{I|L}C]}GY 4 5 29.935 0.0 0.0 2.8361 0.0 0.0 0.0 616.321358699511 616.321358699511 5.386962605902561 0.0 0.0 0.0 0 1.5 0.0 0.3252574989159953 0.0 + {[ES]|[DT]|[{I|L}C]}GY 2.8361 + + 69 1 2.275 81390.3 1.0 520 2858 3378 DOHH2_400M_050219_2,3380 DOHH2_400M_050219_2,3380,SEGYPGKRY True True SEGYPGKRY 15.910409 528.759082019329 6239237.25 3378.0 nc|ENSG00000182199|P34897-3|SHMT2;;ENSG00000182199|ENST00000328923|SHMT2;;nc|ENSG00000182199|P34897-2|SHMT2 7.010725180308024 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3381 15.913 120.0 653950.0 25 0 125420.0 + 31757 RSDRREDYY 9 63 420.5303782780372 1258.5693054343117 3 420.5301086306572 MULTI CID FTMS 0 0 0 3378 260815.421875 0.570016050559707 -2 0.063516616821289 3 Unmodified _RSDRREDYY_ ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7 13.614867670302877 0.4681447649821485 2 YY 2 7 18.583 0.0 0.0 1.4766 0.0 0.0 0.0 929.4187771098344 929.4187771098344 3.979400086720375 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + YY 1.4766 + + 16 + 1 2.275 68742.1 1.0 521 2858 3378 DOHH2_400M_050219_2,3381 DOHH2_400M_050219_2,3381,RSDRREDYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3382 15.92 397.0 179150.0 25 0 12985.0 19893 LHREEMVYEL 10 88 440.2190725452499 1317.6353882359497 3 440.2190734744072 MULTI CID FTMS 0 0 0 3378 108495.25 0.8625174127394207 -1 0.0214691162109375 4 Unmodified _LHREEMVYEL_ CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 11.517880264261096 0.6542831674726655 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQMNT{M(Oxidation (M))|F}QR 10 9 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ + + 52.428 5.4061 1.0351 3.9789 3.9789 51.616 0.0 0.0 0.0 0.0 41.45873464120562 0.0 0.0 0 0.5 0.0 0.7302046884880937 1.1989700043360187 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQMNT{M(Oxidation (M))|F}QR 3.9789 - 211 + 1 2.275 62122.6 1.0 522 2858 3378 DOHH2_400M_050219_2,3382 DOHH2_400M_050219_2,3382,LHREEMVYEL False False False False contaminant PXD020620_cell_line DOHH2_400M_050219_2 3383 15.933 727.0 154250.0 25 0 22280.0 44220 YLGSAWGR 8 129 455.23088668150285 908.4472204298056 2 455.2304260134697 MULTI CID FTMS 0 0 0 3378 107594.0859375 0.819115705144485 2 -0.1014366149902343 5 Unmodified _YLGSAWGR_ ENST00000505932.5_1_1:205492708-205498898:+|nuORF 9.347437153973935 0.7675937258251505 2 R 1 7 21.109 0.0 0.0 2.3237 0.0 0.0 734.3354783417183 0.0 734.3354783417183 0.0 5.6246936830415 0.0 0.0 0 0.5 0.0 0.0 0.2614393726401688 + R 2.3237 + + 146 + 1 2.275 89761.3 1.0 523 2858 3378 DOHH2_400M_050219_2,3383 DOHH2_400M_050219_2,3383,YLGSAWGR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3385 15.949 800.0 116210.0 25 0 9343.0 + 417 AEEKEDGRRW 10 102 425.87418630279217 1274.6007295085765 3 425.8742858767509 MULTI CID FTMS 0 0 0 3384 70288.7421875 0.1318930213570034 5 -0.2336921691894531 1 Unmodified _AEEKEDGRRW_ ENSG00000140299|ENST00000607373|BNIP2;ENST00000560458.5_1_15:59970098-59981480:-|nuORF;nc|ENSG00000140299|Q12982-2|BNIP2 43.9818466556824 0.1155196613165264 2 AEEGAED 7 6 84.456 0.0 0.0 6.6261 0.0 0.0 0.0 570.2912158943974 570.2912158943974 74.36767615529696 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.8494850021680094 0.0 AEEGAED 6.6261 - 489 + 1 2.275 80230.1 0.5099999904632568 524 2859 3384 DOHH2_400M_050219_2,3385 DOHH2_400M_050219_2,3385,AEEKEDGRRW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3386 15.952 147.0 518560.0 25 0 43732.0 + 26505 NVEKKIDKY 9 107 379.54842426332834 1135.623443390185 3 379.5482971072197 MULTI CID FTMS 0 0 0 3384 324875.28125 0.3920915031249997 -2 0.0582618713378906 2 Unmodified _NVEKKIDKY_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000480739.2_1_12:58068877-58069030:+|nuORF 28.23362336080872 0.1719529537093671 2 NV{[TV]|[{I|L}S]}GK{I|L}DKY 10 3 + 65.373 0.0 0.0 5.7566 5.7566 83.374 0.0 0.0 0.0 13.93575203269588 6.766936096248664 6.766936096248664 6.766936096248664 0 0.2059771852360797 1.6989700043360187 0.5 0.0 NV{[TV]|[{I|L}S]}GK{I|L}DKY;NV{[TV]|[{I|L}S]}GK{I|L}DYK;NV{[TV]|[{I|L}S]}D{I|L}KGKY;NV{[TV]|[{I|L}S]}GKASVVY;NV{[TV]|[{I|L}S]}D{I|L}KGYK;{[RE]|[WV]}KG[HV][WP]K 5.7566;5.1607;4.9946;4.4194;4.3987;0.56063 -;-;-;-;-;- 534 + 1 2.275 67802.1 1.0 525 2859 3384 DOHH2_400M_050219_2,3386 DOHH2_400M_050219_2,3386,NVEKKIDKY False True NVEKKIDKY 15.951872 379.54829710722 3830504.25 3384.0 ENST00000480739.2_1_12:58068877-58069030:+|nuORF;;ENSG00000142541|ENST00000391857|RPL13A 4.449649810791016 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3387 15.957 290.0 328470.0 25 0 26850.0 + 8408 ESEPGRGAQY 10 108 547.2494351416589 1092.4843173501176 2 547.2495605349541 MULTI CID FTMS 0 0 0 3384 232960.9375 0.314453032892595 -7 0.221628189086914 3 Unmodified _ESEPGRGAQY_ ENSG00000112651|ENST00000388752|MRPL2;ENST00000491898.5_1_6:43023605-43023818:-|nuORF 62.57269311338072 0.0298375429882549 2 {[ES]|[DT]|[{I|L}C]}EPTQ 6 5 31.036 0.0 0.0 2.8409 0.0 0.0 0.0 418.1836641901001 418.1836641901001 7.280156171532184 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.3807196863200844 0.8494850021680094 {[ES]|[DT]|[{I|L}C]}EPTQ 2.8409 - 631 + 1 2.275 79055.7 1.0 526 2859 3384 DOHH2_400M_050219_2,3387 DOHH2_400M_050219_2,3387,ESEPGRGAQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3388 15.971 800.0 242130.0 25 0 50829.0 -1 YSSCSDGGMGW 11 139 603.7129030210621 1205.411253108924 2 603.7136718630791 MULTI CID FTMS 0 0 0 3384 208567.984375 0.2967112024072008 -2 0.0582618713378906 4 Carbamidomethyl (C) _YSSC(Carbamidomethyl (C))SDGGMGW_ ENST00000515051.1_1_5:175956111-175956726:-|nuORF 36.12702656103203 0.2720571796884491 2 YSDVHMH 7 -1 70.737 0.0 0.0 5.8683 0.0 0.0 0.0 333.0343111627563 333.0343111627563 31.580157145357376 0.0 0.0 0.0 0 1.2134679910804405 1.6989700043360187 0.805462187404089 0.0 YSDVHMH 5.8683 - 1412 + 1 2.275 138335.4 0.7400000095367432 527 2859 3384 DOHH2_400M_050219_2,3388 DOHH2_400M_050219_2,3388,YSSCSDGGMGW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3389 15.98 497.0 132500.0 25 0 6137.9 + 18016 KSDVTNQQY 9 102 541.7593155133934 1081.5040780935867 2 541.7589599490166 MULTI CID FTMS 0 0 0 3384 168204.0 0.9257483989752754 1 -0.0646438598632812 5 Unmodified _KSDVTNQQY_ ENST00000497707.5_1_13:76104538-76111947:-|nuORF 57.72198328787511 0.0273433238377839 2 QTNQQY 6 4 50.028 0.0 0.0 4.6258 0.0 0.0 301.16411025215 0.0 301.16411025215 0.0 30.627348317931272 0.0 0.0 0 0.2887254899964357 0.0 0.3252574989159953 0.9247425010840048 QTNQQY 4.6258 - 582 1 2.275 53587.3 1.0 528 2859 3384 DOHH2_400M_050219_2,3389 DOHH2_400M_050219_2,3389,KSDVTNQQY True True KSDVTNQQY 15.979813 541.758959949017 899835.75 3384.0 ENST00000497707.5_1_13:76104538-76111947:-|nuORF 12.022186915079752 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3390 15.987 375.0 334640.0 25 0 20368.0 -1 SWWLRCQWCCR 11 123 820.855702426205 1639.6968519192098 2 821.3574706912041 MULTI CID FTMS 0 0 0 3384 155760.578125 0.161154301813102 -4 0.1305179595947265 6 2 Carbamidomethyl (C) _SWWLRC(Carbamidomethyl (C))QWC(Carbamidomethyl (C))CR_ ENST00000298292.12_1_14:50100549-50100927:-|nuORF 0.3070304955306653 0.8736993455979228 2 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE 14 -1 + 94.266 0.0 0.0 5.749 5.749 76.694 0.0 0.0 0.0 1.514574280564105 3.265131794229177 1.514574280564105 1.3120207303012137 0 0.8633643341304672 0.0 2.7390690719683093 1.110924374808178 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ASS{[QS]|[NT]}GAE;[EP]AEQGAA[EP]AEQGQE;{[CP]|[EA]}PEQGAA[EP]AEQGQE;{[QG]|[NA]}EPPS{[SA]|[TG]}[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGGAE;[EP]APNS{[SA]|[TG]}[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEEWQ{M(Oxidation (M))|F}QNAE;{[CP]|[EA]}PPNS{[SA]|[TG]}[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA[YV]AWQNAE 5.749;5.669;5.6566;5.5804;5.5499;5.543;5.4486;5.4419;5.3724;5.2927 -;-;-;-;-;-;-;-;-;- 30775 + 1 2.275 90223.6 1.0 529 2859 3384 DOHH2_400M_050219_2,3390 DOHH2_400M_050219_2,3390,SWWLRCQWCCR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3391 15.997 609.0 230200.0 25 0 21898.0 -1 EKKLQNTMK 9 133 568.310410964533 1134.606268995866 2 568.3107177615166 MULTI CID FTMS 0 0 0 3384 105881.296875 0.1850651627684582 -21 0.4569158554077148 7 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 36.506200033944 0.094635877243972 2 KTT[{I|L}P]T[WP]K 9 -1 39.704 0.0 0.0 3.4994 0.0 0.0 63.99778588614601 0.0 63.99778588614601 0.0 7.544805928342008 0.0 0.0 0 1.610924374808178 0.0 1.4386218330464624 0.2887254899964357 KTT[{I|L}P]T[WP]K 3.4994 - 4408 + 1 2.275 109645.4 1.0 530 2859 3384 DOHH2_400M_050219_2,3391 DOHH2_400M_050219_2,3391,EKKLQNTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3393 16.015 800.0 81192.0 25 0 11287.0 + 38519 TSPHHELSVI 10 91 560.2936753576668 1118.5727977821334 2 560.2941772341728 MULTI CID FTMS 0 0 0 3392 54987.265625 0.5554707600031568 1 -0.0540008544921875 1 Unmodified _TSPHHELSVI_ REV__ENST00000486076.5_1_1:151060979-151062981:+|nuORF 14.838274106304384 0.5985701837916485 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}RP 10 -1 + 29.283 0.0 0.0 2.6179 2.6179 67.486 0.0 0.0 0.0 7.269987279362624 2.138798199450811 2.138798199450811 2.138798199450811 0 0.0 0.0 0.0 0.2742275032520141 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTGG{[VA]|[{I|L}G]}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTRRQP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSP[H{I|L}][YK];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M[{I|L}A][C(Carbamidomethyl (C))K]RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MS[H{I|L}]P[YK];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTRRPQ;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTGG{[VA]|[{I|L}G]}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[QV]|[N{I|L}]|[RA]|[KV]}VP 2.6179;2.4267;1.7986;1.7888;1.7128;1.6514;1.6416;1.6198;1.6074;1.5654 -;-;-;-;-;-;-;-;-;- 356 + 1 2.281 56712.9 0.5 531 2860 3392 DOHH2_400M_050219_2,3393 DOHH2_400M_050219_2,3393,TSPHHELSVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3394 16.017 96.0 591010.0 25 0 174960.0 3443 CCTSSPCQQSY 11 75 402.8110940669984 0 402.8110229372978 PEAK CID FTMS 0 0 0 3392 452156.0 0.8129873979860107 -2 0.1014366149902343 2 Unmodified _CCTSSPCQQSY_ ENSG00000221837|ENST00000397911|KRTAP10-9 3.2813086475875832 0.4761840153648598 2 NSD 3 10 4.7814 0.0 0.0 0.59499 0.0 0.0 251.3777290502092 233.1043642633422 484.48209331355145 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NSD 0.59499 - 25 + 1 2.281 48590.1 1.0 532 2860 3392 DOHH2_400M_050219_2,3394 DOHH2_400M_050219_2,3394,CCTSSPCQQSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3395 16.023 336.0 278340.0 25 0 23275.0 + 31467 RPSQERGQSQG 11 113 615.3041317032097 1228.5937104732193 2 615.3041259646416 MULTI CID FTMS 0 0 0 3392 300167.6875 0.5499094358573549 -2 0.1014366149902343 3 Unmodified _RPSQERGQSQG_ ENST00000338779.10_1_16:70697408-70697537:-|nuORF 49.52724829834842 0.1202481389936634 2 DP[WK]PSQSAN 10 8 89.691 0.0 0.0 7.3003 0.0 0.0 100.06415755439608 0.0 100.06415755439608 0.0 58.787756685520094 0.0 0.0 0 1.805462187404089 0.0 2.897940008672037 0.3807196863200844 DP[WK]PSQSAN 7.3003 - 3338 1 2.281 72749.5 1.0 533 2860 3392 DOHH2_400M_050219_2,3395 DOHH2_400M_050219_2,3395,RPSQERGQSQG True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3396 16.027 230.0 341110.0 25 0 61788.0 + 38870 TVKAKTDL 8 89 438.263592314146 874.512631695092 2 438.2634460330009 MULTI CID FTMS 0 0 0 3392 270081.90625 0.7205755218857212 -2 0.1014366149902343 4 Unmodified _TVKAKTDL_ ENSG00000188191|ENST00000537384|PRKAR1B 49.55428908609986 0.1413437743149504 2 {I|L}SKAKTD{I|L} 8 2 + 85.872 0.0 0.0 9.8194 9.8194 91.539 0.0 0.0 0.0 67.86030379803611 17.4459246505903 17.4459246505903 7.909393809954892 0 1.1549471895720984 2.0 0.9531198197908842 0.0 {I|L}SKAKTD{I|L};TVKAKTD{I|L};{[TV]|[{I|L}S]}QSK{[TV]|[{I|L}S]}{I|L};{[TV]|[{I|L}S]}QS{I|L}[KS]{I|L};{[TV]|[{I|L}S]}[AG]SK{[TV]|[{I|L}S]}{I|L};{[TV]|[{I|L}S]}KAE[KS]{I|L};{[TV]|[{I|L}S]}[AG]S{I|L}[KS]{I|L};{[TV]|[{I|L}S]}{I|L}TN[KS]{I|L};[KA]ESK{[TV]|[{I|L}S]}{I|L};[KA]KSE{[TV]|[{I|L}S]}{I|L} 9.8194;8.915;5.2532;4.6311;4.1941;4.1111;3.572;3.1448;2.0503;1.706 -;+;-;-;-;-;-;-;-;- + 348 + 1 2.281 65535.7 1.0 534 2860 3392 DOHH2_400M_050219_2,3396 DOHH2_400M_050219_2,3396,TVKAKTDL False True TVKAKTDL 16.027434 438.263446033001 1808242.875 3392.0 ENSG00000188191|ENST00000537384|PRKAR1B 2.6789042552312217 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3397 16.033 297.0 270830.0 25 0 29009.0 + 39083 TVYFGLVFSL 10 97 382.5477107411952 1144.6213028237855 3 382.5468627810478 MULTI CID FTMS 0 0 0 3392 164109.9375 1.0 0 0.0 5 Unmodified _TVYFGLVFSL_ REV__ENSG00000142959|ENST00000372207|BEST4 20.580933911654288 0.5022139299129796 2 S{I|L} 2 -1 32.519 0.0 0.0 2.841 0.0 0.0 926.4928690037286 0.0 926.4928690037286 0.0 14.357959558990952 0.0 0.0 0 0.7302046884880937 0.0 0.4247425010840047 0.0 S{I|L} 2.841 + + 53 1 2.281 67722.0 1.0 535 2860 3392 DOHH2_400M_050219_2,3397 DOHH2_400M_050219_2,3397,TVYFGLVFSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3398 16.047 800.0 152120.0 25 0 9898.1 + 6039 DSDSEEPSKY 10 133 578.7356104640289 1155.4566679948578 2 578.7356445193291 MULTI CID FTMS 0 0 0 3392 96507.7265625 0.3291322506942877 -4 0.1649532318115234 6 Unmodified _DSDSEEPSKY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 117.7605887643192 0.0007874417321281 2 {[DS]|[MA]|[CV]|TT}DSEEPSKY 10 0 + 82.146 0.0 0.0 7.1094 7.1094 95.17 0.0 0.0 0.0 49.81811003080835 13.037275116073346 13.037275116073346 25.159940911636767 0 1.5356668758921828 0.0 1.916386562212267 0.25 + + {[DS]|[MA]|[CV]|TT}DSEEPSKY;{[DS]|[MA]|[CV]|TT}DS{M(Oxidation (M))|F}[HA]SKY;{[DS]|[MA]|[CV]|TT}DS{[CA]|SS}[PG]NKY;{[DS]|[MA]|[CV]|TT}D{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[PG]NKY;{[DS]|[MA]|[CV]|TT}DS{M(Oxidation (M))|F}[TP][QP]Y;{[DS]|[MA]|[CV]|TT}[YG][HC]PSKY;[YG]DS[HC]PSKY;[KS]PEYESD{[DS]|[MA]|[CV]|TT};[PS]KEYESD{[DS]|[MA]|[CV]|TT};[KS]PYEESD{[DS]|[MA]|[CV]|TT} 7.1094;4.9319;4.4446;3.1784;3.0928;2.9488;2.9405;2.3166;2.3007;2.1433 +;-;-;-;-;-;-;-;-;- + 780 + 1 2.281 95582.8 0.5 536 2860 3392 DOHH2_400M_050219_2,3398 DOHH2_400M_050219_2,3398,DSDSEEPSKY True True DSDSEEPSKY 16.04669 578.735644519329 3754382.25 3392.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 9.897435506184896 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3399 16.051 243.0 167970.0 25 0 12151.0 1122 AGSHLWFGG 9 73 466.2227768377833 930.4310007423668 2 466.2215453982353 MULTI CID FTMS 0 0 0 3392 154379.171875 0.4702629993743957 2 -0.0804462432861328 7 Unmodified _AGSHLWFGG_ ENST00000355387.6_1_1:45116487-45116814:+|nuORF 12.531546534597751 0.4974689918368763 2 {[QS]|[NT]}[H{I|L}][MT]QS 8 6 {[QS]|[NT]}[H{I|L}][MT]Q + + 11.109 -4.0802 -0.49434 1.194 1.194 46.96 0.0 0.0 0.0 0.0 -4.463950151760656 -4.463950151760656 0.0 0 0.0 0.0 0.0 0.0 {[QS]|[NT]}[H{I|L}][MT]QS 1.194 - 29 + 1 2.281 36771.3 1.0 537 2860 3392 DOHH2_400M_050219_2,3399 DOHH2_400M_050219_2,3399,AGSHLWFGG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3401 16.064 574.0 108830.0 25 0 14104.0 + 14594 IIDHHDNTY 9 95 564.2595724610122 1126.5045919888244 2 564.2607299685478 MULTI CID FTMS 0 0 0 3400 100903.765625 0.1302218681978672 4 -0.1464462280273437 1 Unmodified _IIDHHDNTY_ ENSG00000196924|ENST00000369850|FLNA;nc|ENSG00000196924|P21333-2|FLNA 53.40400417844725 0.0329064971918313 2 {I|L}{I|L}DH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D 7 5 58.298 0.0 0.0 5.1751 0.0 0.0 0.0 271.0938814752563 271.0938814752563 19.3254917550291 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3494850021680094 0.3494850021680094 {I|L}{I|L}DH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D 5.1751 - 514 + 1 2.281 51199.1 1.0 538 2861 3400 DOHH2_400M_050219_2,3401 DOHH2_400M_050219_2,3401,IIDHHDNTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3402 16.078 800.0 133260.0 25 0 8619.4 + -1 STCLRMWQGQ 10 122 633.7890108714728 1265.5634688097457 2 633.7893554568291 MULTI CID FTMS 0 0 0 3400 148145.96875 0.9789594803245638 -1 0.0540008544921875 2 Carbamidomethyl (C) _STC(Carbamidomethyl (C))LRMWQGQ_ REV__ENSG00000010256|ENST00000203407|UQCRC1;REV__ENST00000415995.5_1_3:48636563-48647036:-|nuORF;REV__ENST00000471189.5_1_3:48636563-48638429:-|nuORF;REV__ENST00000480561.5_1_3:48636882-48638270:-|nuORF 29.081581746732265 0.3152867722954398 2 [AG]DH[NS][PG]AQQD 12 -1 69.229 0.0 0.0 5.4702 0.0 0.0 0.0 85.04068744487373 85.04068744487373 36.45254738620599 0.0 0.0 0.0 0 0.7614393726401688 2.0 1.2302046884880935 1.9291746928241125 [AG]DH[NS][PG]AQQD 5.4702 - 10660 1 2.281 85101.7 0.6000000238418579 539 2861 3400 DOHH2_400M_050219_2,3402 DOHH2_400M_050219_2,3402,STCLRMWQGQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3404 16.09 536.0 164750.0 25 0 42815.0 + 35479 STMSTNGIPR 10 95 532.263110102333 1062.511667271466 2 532.2631713747978 MULTI CID FTMS 0 0 0 3403 74683.8984375 0.220564338766984 5 -0.1477890014648437 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 28.49450938151212 0.328477364964909 2 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 10 2 + 45.15 0.0 0.0 4.2494 4.2494 76.65 0.0 0.0 0.0 7.269987279362624 6.368220975871743 6.368220975871743 6.368220975871743 0 0.5 0.0 0.0 0.3494850021680094 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTN{[QV]|[N{I|L}]|[RA]|[KV]}VP;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}RP;[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}NTSDW;{[MG]|[TS]}MSTGG{[QV]|[N{I|L}]|[RA]|[KV]}VP;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}PR;[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}GGTSDW 4.2494;3.65;3.3869;3.0705;2.7875;2.6681;2.3692;2.208;2.0688;1.5025 -;+;-;-;-;-;-;-;-;- + 190 + 1 2.281 71262.8 1.0 540 2862 3403 DOHH2_400M_050219_2,3404 DOHH2_400M_050219_2,3404,STMSTNGIPR False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3405 16.104 800.0 123080.0 25 0 10234.0 + -1 LYCWDKWLWCQ 11 97 829.3688208066446 1656.7230886800892 2 829.3682128787041 MULTI CID FTMS 0 0 0 3403 121554.03125 0.7894910807170824 -1 0.0264453887939453 2 2 Carbamidomethyl (C) _LYC(Carbamidomethyl (C))WDKWLWC(Carbamidomethyl (C))Q_ REV__ENST00000359785.9_1_1:114397123-114397534:-|nuORF 0.3070304955306653 0.8736993455979228 2 GGQEA[YR]AEQNAE 13 -1 104.61 0.0 0.0 6.3141 0.0 0.0 235.11773328336287 0.0 235.11773328336287 0.0 55.71308932120187 0.0 0.0 0 0.0 0.0 2.530369551124698 1.610924374808178 GGQEA[YR]AEQNAE 6.3141 - 24019 + 1 2.281 71405.9 0.4799999892711639 541 2862 3403 DOHH2_400M_050219_2,3405 DOHH2_400M_050219_2,3405,LYCWDKWLWCQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3406 16.117 800.0 98375.0 25 0 10442.0 23391 LTDSEKGNSY 10 110 557.2564595190452 1112.4983661048902 2 557.2562133669853 MULTI CID FTMS 0 0 0 3403 103808.140625 0.9291042305315717 -1 0.0264453887939453 3 Unmodified _LTDSEKGNSY_ ENSG00000116191|ENST00000367635|RALGPS2;ENST00000478871.1_1_1:178863027-178885491:+|nuORF;nc|ENSG00000116191|Q86X27-3|RALGPS2 40.23920728925047 0.1550410903091231 2 {I|L}T[HM]D[NS]APQ 10 8 + 63.769 0.0 0.0 5.7321 5.7321 58.452 0.0 0.0 0.0 26.52424677945012 3.3730302328386443 3.3730302328386443 0.0 0 0.3807196863200844 2.0 0.3494850021680094 1.0303695511246984 {I|L}T[HM]D[NS]APQ;{I|L}TD[HM][NS]APQ;{I|L}TD{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))Q]SY;{I|L}T[HM]D[NS]AQP;{I|L}TD[HM][NS]AQP;{I|L}TD{[RE]|[WV]}{[ET]|[MV]}SY;{I|L}T[WR][C(Carbamidomethyl (C))Q]SY;{I|L}TD{[ES]|[DT]|[{I|L}C]}[W{I|L}]SY;{I|L}T[HM]DWDVP;[{I|L}T]DWDS[{I|L}T]Y 5.7321;5.7321;5.4289;5.3729;5.3729;5.0866;4.8466;4.8046;3.5597;3.3479 -;-;-;-;-;-;-;-;-;- 907 + 1 2.281 64524.2 0.5199999809265137 542 2862 3403 DOHH2_400M_050219_2,3406 DOHH2_400M_050219_2,3406,LTDSEKGNSY False True LTDDTHTDPV 16.11735 557.256213366985 537373.125 3403.0 ENST00000473486.1_1_9:131397903-131399306:-|nuORF;;ENSG00000119333|ENST00000372715|DYNC2I2 -0.1275369922320048 2.0 False 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3408 16.134 800.0 84066.0 25 0 21184.0 -1 0 38 1144.445143640308 3430.3136015211244 3 1145.114428699017 MULTI CID FTMS 0 0 0 3407 150034.578125 0.2404413776759965 3 -0.0841751098632812 1 2 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.31977 0.0 0.0 1709.5834296504463 1513.6141639446446 3223.197593595091 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.31977 - 5 + 1 2.281 63878.1 0.7400000095367432 543 2863 3407 DOHH2_400M_050219_2,3408 DOHH2_400M_050219_2,3408, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3409 16.139 258.0 257710.0 25 0 31411.0 + 37366 TKRDPLASAF 10 81 553.3050687010377 1104.5955844688754 2 553.3048583865166 MULTI CID FTMS 0 0 0 3407 187412.609375 0.5448858695000376 -6 0.2430381774902343 2 Unmodified _TKRDPLASAF_ REV__ENSG00000072609|ENST00000450056|CHFR;REV__nc|ENSG00000072609|Q96EP1-3|CHFR;REV__nc|ENSG00000072609|Q96EP1-4|CHFR;REV__nc|ENSG00000072609|Q96EP1-5|CHFR;REV__nc|ENSG00000072609|Q96EP1|CHFR 15.248480904072842 0.5916873121453583 2 [KT][RD][{I|L}P]TTK 9 -1 45.48 0.0 0.0 4.1173 0.0 0.0 0.0 60.97485743489565 60.97485743489565 29.85047617717457 0.0 0.0 0.0 0 1.5 0.0 2.0356668758921828 0.0 [KT][RD][{I|L}P]TTK 4.1173 - 121 1 2.281 56315.5 1.0 544 2863 3407 DOHH2_400M_050219_2,3409 DOHH2_400M_050219_2,3409,TKRDPLASAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3410 16.152 800.0 34480.0 25 0 10472.0 -1 0 22 1171.117470025776 3510.330580677529 3 1171.787158191204 MULTI CID FTMS 0 0 0 3407 93827.9453125 0.7908012062869145 -4 0.1847763061523437 3 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.19912 0.0 0.0 2203.779995816004 1156.4729383375611 3360.252934153565 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19912 - 2 + 1 2.281 31777.0 0.3499999940395355 545 2863 3407 DOHH2_400M_050219_2,3410 DOHH2_400M_050219_2,3410, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3411 16.166 800.0 69994.0 25 0 17796.0 -1 RFHCSWCWHTW 11 54 831.845966534983 1661.6773801367658 2 831.8452026247978 MULTI CID FTMS 0 0 0 3407 94422.1484375 0.8713651467928073 -2 0.066131591796875 4 2 Carbamidomethyl (C) _RFHC(Carbamidomethyl (C))SWC(Carbamidomethyl (C))WHTW_ ENSG00000175077|ENST00000312295|RTP1;ENSG00000198471|ENST00000358241|RTP2 0.0 0.8751479354844584 2 PP{[CP]|[EA]}NSSA 8 -1 35.891 0.0 0.0 2.1599 0.0 0.0 0.0 905.323214164409 905.323214164409 35.89062518744797 0.0 0.0 0.0 0 1.048455006504028 0.0 0.0 0.0 PP{[CP]|[EA]}NSSA 2.1599 - 31 + 1 2.281 43406.0 0.4199999868869781 546 2863 3407 DOHH2_400M_050219_2,3411 DOHH2_400M_050219_2,3411,RFHCSWCWHTW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3413 16.171 20.0 3162700.0 25 0 538390.0 + -1 IQRLETMK 8 73 517.7863733372224 1033.5581937412446 2 517.7869140505791 MULTI CID FTMS 0 0 0 3412 2806715.75 1.0 0 0.0 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 2 KTT[{I|L}P][WP]K 8 -1 45.979 0.0 0.0 4.4486 0.0 0.0 63.99808776126503 0.0 63.99808776126503 0.0 25.356668758921828 0.0 0.0 0 1.3807196863200843 0.0 1.274227503252014 0.3054621874040891 KTT[{I|L}P][WP]K 4.4486 - 151 + 1 2.287 53966.5 1.0 547 2864 3412 DOHH2_400M_050219_2,3413 DOHH2_400M_050219_2,3413,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3414 16.184 726.0 166970.0 25 0 28990.0 + 38465 TSDKPGSPY 9 142 476.2266423718932 950.4387318105864 2 476.2239868044853 MULTI CID FTMS 0 0 0 3412 92636.3515625 0.8010101786622877 -3 0.1150474548339843 2 Unmodified _TSDKPGSPY_ ENSG00000068366|ENST00000672401|ACSL4;nc|ENSG00000068366|O60488|ACSL4 32.30548876998284 0.1201446275138228 2 KDSTPY 6 6 22.417 0.0 0.0 2.3586 0.0 0.0 241.10620314765785 0.0 241.10620314765785 0.0 8.922407658992988 0.0 0.0 0 0.5440228147639203 0.0 0.4247425010840047 0.0 KDSTPY 2.3586 - 274 1 2.287 98474.9 1.0 548 2864 3412 DOHH2_400M_050219_2,3414 DOHH2_400M_050219_2,3414,TSDKPGSPY True True TSDKPGSPY 16.18407 476.223986804485 708627.5 3412.0 ENSG00000068366|ENST00000672401|ACSL4;;nc|ENSG00000068366|O60488|ACSL4 2.689415256182353 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3415 16.19 304.0 289010.0 25 0 42021.0 + + 19352 ELPKKREL 8 69 506.8116591333975 1011.608765333595 2 506.8113891482353 MULTI CID FTMS 0 0 0 3412 216415.53125 1.0 0 0.0 3 Unmodified _LEPKLKER_ ENSG00000130749|ENST00000253048|ZC3H4 27.628801355627647 0.4629596117395134 2 E{I|L}PKK 5 -1 53.984 0.0 0.0 5.3365 0.0 0.0 0.0 413.21613489322505 413.21613489322505 46.197887582883936 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 E{I|L}PKK 5.3365 - 67 + 1 2.287 71519.6 1.0 549 2864 3412 DOHH2_400M_050219_2,3415 DOHH2_400M_050219_2,3415,LEPKLKER False False ELPKKREL 16.189625 506.811389148235 936890.3125 3412.0 ENSG00000130749|ENST00000253048|ZC3H4 4.645733912785848 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3416 16.198 453.0 219100.0 25 0 37157.0 36235 SWRTPCALK 9 103 531.2801430260728 1060.5457331189457 2 531.7848388552666 MULTI CID FTMS 0 0 0 3412 103727.328125 0.3613458830496638 -9 0.3642101287841797 4 Unmodified _SWRTPCALK_ ENST00000473929.1_1_10:99186064-99186940:+|nuORF 11.640296217721598 0.521594087909532 2 KET[{I|L}P][WP]K 8 6 25.621 0.0 0.0 2.4159 0.0 0.0 62.9900582175547 0.0 62.9900582175547 0.0 13.402887499330731 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.3252574989159953 KET[{I|L}P][WP]K 2.4159 - 278 + 1 2.287 80702.1 1.0 550 2864 3412 DOHH2_400M_050219_2,3416 DOHH2_400M_050219_2,3416,SWRTPCALK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3419 16.206 72.0 667000.0 25 0 64523.0 + 8409 ESEPGRGAQY 10 73 547.2494351416589 1092.4843173501176 2 547.2491332888603 MULTI CID FTMS 0 0 0 3418 740844.9375 1.0 0 0.0 1 Unmodified _ESEPGRGAQY_ ENSG00000112651|ENST00000388752|MRPL2;ENST00000491898.5_1_6:43023605-43023818:-|nuORF 34.40172386719151 0.2166836008404837 2 {[ES]|[DT]|[{I|L}C]}EPT 5 6 21.778 0.0 0.0 1.9935 0.0 0.0 0.0 546.2444552057249 546.2444552057249 6.293709283484077 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}EPT 1.9935 - 135 + 1 2.287 45657.1 1.0 551 2866 3418 DOHH2_400M_050219_2,3419 DOHH2_400M_050219_2,3419,ESEPGRGAQY False True ESEPGRGAQY 16.20632 547.24913328886 35892992.0 3418.0 ENSG00000112651|ENST00000388752|MRPL2;;ENST00000491898.5_1_6:43023605-43023818:-|nuORF 8.23447291056315 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3420 16.212 290.0 271150.0 25 0 20783.0 + 26506 NVEKKIDKY 9 116 379.54842426332834 1135.623443390185 3 379.5483276247978 MULTI CID FTMS 0 0 0 3418 112874.515625 0.1362280882855334 5 -0.159881591796875 2 Unmodified _NVEKKIDKY_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000480739.2_1_12:58068877-58069030:+|nuORF 10.150570793230772 0.5619192000662246 2 Y 1 8 13.979 0.0 0.0 1.231 0.0 0.0 954.5489632649882 0.0 954.5489632649882 0.0 0.4929531986722679 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.231 + + 117 + 1 2.287 70363.9 1.0 552 2866 3418 DOHH2_400M_050219_2,3420 DOHH2_400M_050219_2,3420,NVEKKIDKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3421 16.225 800.0 200320.0 25 0 23812.0 + 29493 QLKQRNTL 8 115 500.7986608880661 999.5827688429322 2 500.7984191775322 MULTI CID FTMS 0 0 0 3418 188437.515625 0.6435307079915088 -3 0.0841751098632812 3 Unmodified _QLKQRNTL_ ENSG00000007312|ENST00000006750|CD79B;ENST00000559358.1_1_17:62006588-62007812:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B;nc|ENSG00000007312|P40259-3|CD79B 52.268347100219714 0.1285778651304833 2 Q{I|L}KQ[RN]T{I|L} 8 0 + 54.407 0.0 0.0 5.4429 5.4429 86.006 0.0 0.0 0.0 41.43830099163854 1.3406733180681272 1.3406733180681272 9.262137858390815 0 0.5994850021680094 1.6989700043360187 0.6109243748081782 0.805462187404089 + + Q{I|L}KQ[RN]T{I|L};Q{I|L}K[AG][RN]T{I|L};Q{I|L}{I|L}[NP][R{M(Oxidation (M))|F}]{I|L};Q{I|L}{I|L}Y[H{I|L}]T{I|L};Q{I|L}{I|L}[QT]{[RE]|[WV]}{I|L} 5.4429;4.5163;3.7868;3.654;3.0875 +;-;-;-;- + 495 + 1 2.287 124297.4 0.699999988079071 553 2866 3418 DOHH2_400M_050219_2,3421 DOHH2_400M_050219_2,3421,QLKQRNTL False True QLKQRNTL 16.225449 500.798419177532 1192660.125 3418.0 chr17:63929888-63930063|14|200.36|0.08|11.36|-|2|CD79B,None|1;;nc|ENSG00000007312|P40259-3|CD79B;;ENSG00000007312|ENST00000006750|CD79B;;ENST00000559358.1_1_17:62006588-62007812:-|nuORF;;nc|ENSG00000007312|P40259-2|CD79B 3.893631935119629 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3423 16.242 800.0 128300.0 25 0 20773.0 -1 YSSCSDGGMGW 11 90 603.7129030210621 1205.411253108924 2 603.7136718630791 MULTI CID FTMS 0 0 0 3422 92690.875 0.131863099966373 6 -0.1538295745849609 1 Carbamidomethyl (C) _YSSC(Carbamidomethyl (C))SDGGMGW_ ENST00000515051.1_1_5:175956111-175956726:-|nuORF 17.11289562659939 0.6791789249425932 2 YSDVR 5 -1 64.865 0.0 0.0 5.3811 0.0 0.0 0.0 582.1056612604124 582.1056612604124 43.43318134631147 0.0 0.0 0.0 0 0.805462187404089 2.0 0.4247425010840047 0.0 YSDVR 5.3811 - 251 + 1 2.287 78540.6 0.6299999952316284 554 2867 3422 DOHH2_400M_050219_2,3423 DOHH2_400M_050219_2,3423,YSSCSDGGMGW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3424 16.248 359.0 283830.0 25 0 51597.0 + 10453 FTESQKTKY 9 119 377.8605994525632 1130.5599689578896 3 377.8608886599541 MULTI CID FTMS 0 0 0 3422 143623.796875 0.6584766868144168 -1 0.0239276885986328 2 Unmodified _FTESQKTKY_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 53.40400417844725 0.0329064971918313 2 {M(Oxidation (M))|F}TESQKTKY 9 0 + 66.112 0.0 0.0 5.8477 5.8477 86.909 0.0 0.0 0.0 46.11194248039156 13.46787486224656 13.46787486224656 9.208187539523747 0 0.6549471895720984 0.0 0.5 0.5 + + {M(Oxidation (M))|F}TESQKTKY;{M(Oxidation (M))|F}TES[AG]KTKY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VTK[Y{M(Oxidation (M))|F}]TE;{M(Oxidation (M))|F}[WM]QKTKY;{[DS]|[MA]|[CV]|TT}E{I|L}K[Y{M(Oxidation (M))|F}]TE;{M(Oxidation (M))|F}T[Y{M(Oxidation (M))|F}]K{I|L}EPS;{[ET]|[MV]}T{I|L}K[Y{M(Oxidation (M))|F}]TE;[KT]NTK[Y{M(Oxidation (M))|F}]TE;{M(Oxidation (M))|F}[WM][AG]KTKY;{[QS]|[NT]}KTK[Y{M(Oxidation (M))|F}]TE 5.8477;5.0333;3.1948;3.1272;3.1263;3.092;2.8247;2.3405;2.3079;2.2708 +;-;-;-;-;-;-;-;-;- + 410 + 1 2.287 87967.2 1.0 555 2867 3422 DOHH2_400M_050219_2,3424 DOHH2_400M_050219_2,3424,FTESQKTKY True True FTESQKTKY 16.248303 377.860888659954 807410.9375 3422.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94517539-94521656:-|nuORF 7.03073263168335 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3425 16.262 800.0 83315.0 25 0 4557.1 + 7156 EENPNNNENTY 11 100 669.2660450736779 1336.5175372141557 2 669.2661010622978 MULTI CID FTMS 0 0 0 3422 90062.0703125 0.4423480181194716 -2 0.0277881622314453 3 Unmodified _EENPNNNENTY_ ENSG00000184205|ENST00000375442|TSPYL2;ENST00000556808.1_1_X:53114705-53115656:+|nuORF 36.506200033944 0.2662161991516171 2 EEN 3 8 25.15 0.0 0.0 1.8818 0.0 0.0 0.0 961.3668468667526 961.3668468667526 0.7918124604762511 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.0 0.0 + EEN 1.8818 + + 1290 1 2.287 55565.9 0.4699999988079071 556 2867 3422 DOHH2_400M_050219_2,3425 DOHH2_400M_050219_2,3425,EENPNNNENTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3426 16.272 549.0 170960.0 25 0 39449.0 -1 0 82 464.2312297667368 463.2239533001368 1 464.2320739626884 MULTI CID FTMS 0 0 0 3422 108876.4375 0.8758517854105985 -1 0.0239276885986328 4 2 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}W 3 -1 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} + + 12.218 -0.42288 -0.16319 2.6377 2.6377 48.297 0.0 0.0 0.0 0.0 2.552725051033063 0.0 0.0 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}W 2.6377 - 34 + 1 2.287 76484.3 1.0 557 2867 3422 DOHH2_400M_050219_2,3426 DOHH2_400M_050219_2,3426, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3428 16.277 72.0 659360.0 25 0 43720.0 + 31478 RPWYWEWCTWQ 11 66 820.855702426205 1639.6968519192098 2 820.8558227419853 MULTI CID FTMS 0 0 0 3427 726458.125 0.5858093318596537 5 -0.1075191497802734 1 Unmodified _RPWYWEWCTWQ_ REV__ENST00000409198.5_2_2:152506865-152507290:-|nuORF 0.2690200627634905 0.8738786812967896 2 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE 14 -1 + 82.674 0.0 0.0 5.042 5.042 81.385 0.0 0.0 0.0 51.43175948177209 12.42042819880612 12.42042819880612 7.813119813491198 0 0.3182503180159344 0.0 2.128144697160131 0.3807196863200844 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE;{[CP]|[EA]}PEV{NN|[MP]|[D{I|L}]|[EV]}[EP]AEQGQE;[EP]AEV{NN|[MP]|[D{I|L}]|[EV]}[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA[YV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]Q{M(Oxidation (M))|F}QNAE;{[CP]|[EA]}PEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA[YV]YQ[HA]AE;[EP]AEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQ[RH]{M(Oxidation (M))|F}A[HA]QNAE;{[CP]|[EA]}PPNS{[SA]|[TG]}[EP]AEQGQE 5.042;4.5655;4.5064;4.478;4.4032;4.3819;4.3403;4.3228;4.2917;4.2574 -;-;-;-;-;-;-;-;-;- 3481 + 1 2.287 38943.7 1.0 558 2868 3427 DOHH2_400M_050219_2,3428 DOHH2_400M_050219_2,3428,RPWYWEWCTWQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3429 16.285 488.0 213370.0 25 0 25716.0 -1 EKKLQNTMK 9 117 568.310410964533 1134.606268995866 2 568.3115112185478 MULTI CID FTMS 0 0 0 3427 123555.21875 0.2159566169259882 -12 0.4394989013671875 2 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 2 KTT{I|L}P 5 -1 50.943 0.0 0.0 4.49 0.0 0.0 63.99724791263595 527.259598631329 591.256846543965 0.0 0.0 0.0 0.0 0 1.325257498915995 0.0 1.274227503252014 0.0 KTT{I|L}P 4.49 - 403 + 1 2.287 85365.1 1.0 559 2868 3427 DOHH2_400M_050219_2,3429 DOHH2_400M_050219_2,3429,EKKLQNTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3430 16.292 387.0 226900.0 25 0 14872.0 + 40198 VGQFSLTRSH 10 126 566.2980323795689 1130.5815118259377 2 566.3005248904228 MULTI CID FTMS 0 0 0 3427 161155.265625 0.6327799695755766 -2 0.0702381134033203 3 Unmodified _VGQFSLTRSH_ REV__ENST00000380599.8_1_17:7365719-7365791:-|nuORF 10.823927491677226 0.6659270209832991 2 [VG]Q[WR]PSQ 8 -1 31.098 0.0 0.0 2.7506 0.0 0.0 0.0 189.08825209284944 189.08825209284944 6.404784322338564 0.0 0.0 0.0 0 0.3252574989159953 1.0457574905606752 0.75 0.3054621874040891 [VG]Q[WR]PSQ 2.7506 - 566 1 2.287 70038.6 1.0 560 2868 3427 DOHH2_400M_050219_2,3430 DOHH2_400M_050219_2,3430,VGQFSLTRSH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3431 16.298 300.0 234840.0 25 0 39895.0 6737 EDLSHPGA 8 108 413.191544560832 824.368536188464 2 413.1916381716728 MULTI CID FTMS 0 0 0 3427 113436.0390625 0.8579440795246409 -2 0.0702381134033203 4 Unmodified _EDLSHPGA_ ENST00000425673.5_1_19:39903285-39903747:+|nuORF 9.347437153973935 0.7675937258251505 2 EA 2 6 22.717 0.0 0.0 2.7556 0.0 0.0 606.2768392584316 0.0 606.2768392584316 0.0 19.61758134947864 0.0 0.0 0 0.1747425010840047 0.0 0.0 0.0 EA 2.7556 - 83 1 2.287 60849.8 1.0 561 2868 3427 DOHH2_400M_050219_2,3431 DOHH2_400M_050219_2,3431,EDLSHPGA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3433 16.315 800.0 85136.0 25 0 5515.3 + 27287 PHIFDCLLSAN 11 95 615.3041317032097 1228.5937104732193 2 615.3035766482353 MULTI CID FTMS 0 0 0 3432 77983.3125 0.1428660084645613 7 -0.1430301666259765 1 Unmodified _PHIFDCLLSAN_ REV__ENST00000424710.5_1_7:120496852-120497216:-|nuORF 38.17557092003332 0.2405003631267018 2 [AG]SG[WR][VP]QSAN 12 -1 + 63.417 0.0 0.0 5.1617 5.1617 75.243 0.0 0.0 0.0 1.9836765376683303 9.098233696509112 1.9836765376683303 1.9836765376683303 0 1.424742501084005 1.5228787452803376 2.388210492164445 0.3494850021680094 [AG]SG[WR][VP]QSAN;{[SA]|[TG]}GG[WR][VP]QSAN;{[SA]|[TG]}N[WR][VP]QSAN;[AG]SP{[RE]|[WV]}{[NV]|[RG]}QSAN;{[SA]|[TG]}GP{[RE]|[WV]}{[NV]|[RG]}QSAN;[AG]SP[HV]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}SAN;[AG]S[H{I|L}]M[{I|L}T]QSAN;{[SA]|[TG]}GP[HV]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}SAN;{[SA]|[TG]}G[H{I|L}]M[{I|L}T]QSAN;[AG]S[H{I|L}]MV{[QD]|[EN]|[WG]|[KD]|[RS]}SAN 5.1617;5.0003;4.9149;4.8772;4.7157;4.6508;4.6343;4.4893;4.4729;4.4724 -;-;-;-;-;-;-;-;-;- 1552 1 2.287 55087.5 0.5699999928474426 562 2869 3432 DOHH2_400M_050219_2,3433 DOHH2_400M_050219_2,3433,PHIFDCLLSAN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3434 16.329 800.0 110970.0 25 0 25150.0 + 39672 VEEKDPQSTN 10 106 573.7671166478121 0 573.7676269412041 PEAK CID FTMS 0 0 0 3432 126288.875 0.9779930367276408 -3 0.0960960388183593 2 Unmodified _VEEKDPQSTN_ REV__nc|ENSG00000105429|Q7Z7M0-2|MEGF8 43.9818466556824 0.0820936144366115 2 TSQSPD 6 -1 36.49 0.0 0.0 3.1854 0.0 0.0 132.0588171805867 395.1916292779906 527.2504464585774 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.9247425010840048 0.0 TSQSPD 3.1854 - 519 + 1 2.287 72374.6 0.5699999928474426 563 2869 3432 DOHH2_400M_050219_2,3434 DOHH2_400M_050219_2,3434,VEEKDPQSTN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3435 16.343 800.0 86961.0 25 0 13261.0 + 6040 DSDSEEPSKY 10 98 578.7356104640289 1155.4566679948578 2 578.7354614138603 MULTI CID FTMS 0 0 0 3432 85072.53125 0.2901333880706358 5 -0.1132411956787109 3 Unmodified _DSDSEEPSKY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 38.61474834105838 0.1721950110283317 2 {[DS]|[MA]|[CV]|TT}DSEE[PS]KY 10 0 + 40.935 0.0 0.0 3.5428 3.5428 76.564 0.0 0.0 0.0 26.33085333508717 6.989700043360188 6.989700043360188 8.893017025063102 0 0.7742275032520141 0.0 0.3807196863200844 0.0 + + {[DS]|[MA]|[CV]|TT}DSEE[PS]KY;{[DS]|[MA]|[CV]|TT}DSEE[PS]YK;{[DS]|[MA]|[CV]|TT}D{[YD]|[{M(Oxidation (M))|F}M]}[HN]KY;{[DS]|[MA]|[CV]|TT}D[YN][HD]KY 3.5428;2.7731;0.72267;0.6784 +;-;-;- + 191 + 1 2.287 58253.2 0.4799999892711639 564 2869 3432 DOHH2_400M_050219_2,3435 DOHH2_400M_050219_2,3435,DSDSEEPSKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3437 16.357 718.0 228390.0 25 0 49070.0 + 6510 EAKKIERL 8 93 493.8033256795125 0 493.8035156130791 PEAK CID FTMS 0 0 0 3436 161304.796875 1.0 0 0.0 1 Unmodified _EAKKIERL_ ENSG00000183520|ENST00000373014|UTP11;ENST00000488453.1_1_1:38483328-38489297:+|nuORF;nc|ENSG00000183520|Q9Y3A2-2|UTP11 47.594388314883695 0.1132727409746445 2 AKK{I|L}ER 6 2 33.827 0.0 0.0 3.4322 0.0 0.0 129.04198731306423 128.07184778385002 257.1138350969143 0.0 0.0 0.0 0.0 0 1.0994850021680094 0.0 0.0 0.0 + AKK{I|L}ER 3.4322 + + 174 + 1 2.287 129492.0 1.0 565 2870 3436 DOHH2_400M_050219_2,3437 DOHH2_400M_050219_2,3437,EAKKIERL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3438 16.361 205.0 289010.0 25 0 29065.0 + 26973 PEEVAYPDY 9 100 541.7355552410199 1081.4565575488398 2 541.7358276247978 MULTI CID FTMS 0 0 0 3436 284495.46875 0.2497329263514239 -7 0.2251491546630859 2 Unmodified _PEEVAYPDY_ REV__ENSG00000129518|ENST00000250454|EAPP;REV__ENST00000555683.1_1_14:35005207-35008876:-|nuORF 50.855029805455786 0.0384952370514206 2 [EP]NTDKTDY 9 -1 + 90.248 0.0 0.0 8.345 8.345 94.076 0.0 0.0 0.0 12.12144052772942 16.478174818886373 12.12144052772942 9.827796776480469 0 0.9247425010840048 1.0457574905606752 1.4361818737241734 1.110924374808178 [EP]NTDKTDY;[EP]NDTKTDY;[EP]GGTDKTDY;{[QS]|[NT]}PEDKTDY;{[ES]|[DT]|[{I|L}C]}[QP]DKTDY;[EP]DNTKTDY;[EP]GGDTKTDY;{[ES]|[DT]|[{I|L}C]}N[EP]KTDY;{[QS]|[NT]}D[EP]KTDY;{[ES]|[DT]|[{I|L}C]}K[EP]NTDY 8.345;7.4363;7.2518;7.2242;6.9954;6.9145;6.3431;5.9462;5.9214;5.8921 -;-;-;-;-;-;-;-;-;- 600 1 2.287 51973.5 1.0 566 2870 3436 DOHH2_400M_050219_2,3438 DOHH2_400M_050219_2,3438,PEEVAYPDY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3441 16.371 175.0 340150.0 25 0 28894.0 5368 DLKEKKEVV 9 96 363.2166597592583 1086.628149877975 3 363.2165405154228 MULTI CID FTMS 0 0 0 3440 161075.515625 0.3620374430534218 -4 0.0936870574951171 1 Unmodified _DLKEKKEVV_ ENSG00000187514|ENST00000409115|PTMA;ENST00000466801.5_1_2:232571605-232577558:+|nuORF;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;ENST00000607242.1_1_13:82264202-82264532:+|nuORF;nc|ENSG00000187514|P06454|PTMA 24.881564428377168 0.2146028316269493 2 K{I|L}DV 4 7 27.155 0.0 0.0 2.499 0.0 0.0 613.343553611525 0.0 613.343553611525 0.0 21.670175336041453 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 K{I|L}DV 2.499 - 32 1 2.287 59148.5 1.0 567 2872 3440 DOHH2_400M_050219_2,3441 DOHH2_400M_050219_2,3441,DLKEKKEVV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3442 16.379 444.0 200850.0 25 0 13167.0 + 11296 GEVEQQRTY 9 103 555.2648750419579 1108.5151971507155 2 555.2636596560478 MULTI CID FTMS 0 0 0 3440 168865.703125 0.0763629228723671 -9 0.2481002807617187 2 Unmodified _GEVEQQRTY_ ENSG00000178691|ENST00000322652|SUZ12;ENST00000578106.1_1_17:30321573-30326019:+|nuORF 72.96794272382148 0.0199516581995792 2 {[DA]|[EG]}VEQQRTY 9 0 + 96.794 0.0 0.0 8.7318 8.7318 93.207 0.0 0.0 0.0 68.13363730737706 12.587418566968154 12.587418566968154 9.208187539523747 0 1.424742501084005 1.6989700043360187 1.1861818737241734 0.6861818737241735 + + {[DA]|[EG]}VEQQRTY;{[DA]|[EG]}VE[AG]QRTY;{[DA]|[EG]}VEQ[AG]RTY;{[DA]|[EG]}VE[AG][AG]RTY;{[DA]|[EG]}VEQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[HG]|PP};{[DA]|[EG]}V[QA]GERTY;{[DA]|[EG]}VE[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[HG]|PP};WV{M(Oxidation (M))|F}[HT]RTY;{[DA]|[EG]}V[RN]{[{M(Oxidation (M))|F}C]|[YS]}VW;{[DA]|[EG]}V[RN]{[{M(Oxidation (M))|F}C]|[YS]}P{[MG]|[TS]} 8.7318;7.9011;7.9011;7.0744;5.8254;5.0153;4.9986;4.8387;4.0043;3.3325 +;-;-;-;-;-;-;-;-;- + 734 + 1 2.287 76427.1 1.0 568 2872 3440 DOHH2_400M_050219_2,3442 DOHH2_400M_050219_2,3442,GEVEQQRTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3444 16.397 800.0 68306.0 25 0 23811.0 -1 0 32 1144.4452604669525 3430.3139520010573 3 1144.779711902142 MULTI CID FTMS 0 0 0 3443 145142.65625 0.5957588260412422 -2 0.0178756713867187 1 2 {M(Oxidation (M))|F}G 2 -1 7.9588 0.0 0.0 0.23201 0.0 0.0 1709.6040653817197 1513.607062444566 3223.211127826285 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.23201 - 5 + 1 2.292 58593.4 0.4099999964237213 569 2873 3443 DOHH2_400M_050219_2,3444 DOHH2_400M_050219_2,3444, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3445 16.411 800.0 149950.0 25 0 10239.0 + 5369 DLKEKKEVV 9 121 544.3218167039637 1086.6290804747273 2 544.3221923708916 MULTI CID FTMS 0 0 0 3443 92172.7890625 0.7780498089385021 -1 0.0138320922851562 2 Unmodified _DLKEKKEVV_ ENSG00000187514|ENST00000409115|PTMA;ENST00000466801.5_1_2:232571605-232577558:+|nuORF;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;ENST00000607242.1_1_13:82264202-82264532:+|nuORF;nc|ENSG00000187514|P06454|PTMA 68.4839486629058 0.0216850058378077 2 D{I|L}KEK 5 4 59.641 0.0 0.0 5.4886 0.0 0.0 0.0 470.26230798892817 470.26230798892817 26.448565749036064 0.0 0.0 0.0 0 1.1989700043360187 2.0 0.3494850021680094 0.0 + D{I|L}KEK 5.4886 + + 290 + 1 2.292 95261.4 0.4799999892711639 570 2873 3443 DOHH2_400M_050219_2,3445 DOHH2_400M_050219_2,3445,DLKEKKEVV True True DLKEKKEVV 16.410861 544.322192370892 2421646.1875 3443.0 ENST00000607242.1_1_13:82264202-82264532:+|nuORF;;nc|ENSG00000187514|P06454|PTMA;;ENST00000466801.5_1_2:232571605-232577558:+|nuORF;;ENST00000468027.5_1_2:232573416-232577283:+|nuORF;;ENSG00000187514|ENST00000409115|PTMA 6.211076736450195 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3447 16.417 196.0 396300.0 25 0 45912.0 + -1 VQIAWLTMK 9 81 553.3050687010377 1104.5955844688754 2 553.3052245974541 MULTI CID FTMS 0 0 0 3446 290352.5625 0.8441748343773975 5 -0.1094512939453125 1 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 18.1463463914782 0.3454829746528889 2 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}Q 9 -1 + 31.883 0.0 0.0 2.8864 2.8864 73.132 0.0 0.0 0.0 0.060443407534624 12.47302484056647 0.060443407534624 6.505149978319906 0 1.718765315847925 0.0 0.7302046884880937 0.0 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}Q;[C(Carbamidomethyl (C))K][{I|L}V][{I|L}P]T{M(Oxidation (M))|F}Q;[KT][RD][{I|L}P]GV[YG];[KT][WP]VVT{M(Oxidation (M))|F}Q;[C(Carbamidomethyl (C))K][{I|L}V][{I|L}P]GV[YG];[KT]T[{I|L}P][RD]{M(Oxidation (M))|F}Q;{[MG]|[TS]}RR[{I|L}P]G[YR];{[MG]|[TS]}RR[{I|L}P]R[YG];[KT][WP]VVGV[YG];[KT][RD][RH][RH] 2.8864;2.2975;1.9373;1.7293;1.3484;1.0758;0.80956;0.80956;0.78021;0.41995 -;-;-;-;-;-;-;-;-;- 195 1 2.292 65284.6 1.0 571 2874 3446 DOHH2_400M_050219_2,3447 DOHH2_400M_050219_2,3447,VQIAWLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3448 16.419 106.0 413910.0 25 0 61186.0 13787 HSLWHCHI 8 72 516.7467526165798 1031.4789522999597 2 516.7464477419853 MULTI CID FTMS 0 0 0 3446 261466.90625 0.6237853638359843 -3 0.0494556427001953 2 Unmodified _HSLWHCHI_ ENST00000434365.1_1_X:114937583-114938135:+|nuORF 13.50788311687929 0.7113601687236069 2 HSYE 4 6 50.31 0.0 0.0 4.8775 0.0 0.0 0.0 512.2686811717494 512.2686811717494 38.091517729002206 0.0 0.0 0.0 0 0.7887254899964358 1.3979400086720375 0.0 0.0 HSYE 4.8775 - 50 + 1 2.292 40517.7 1.0 572 2874 3446 DOHH2_400M_050219_2,3448 DOHH2_400M_050219_2,3448,HSLWHCHI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3449 16.423 181.0 423420.0 25 0 73313.0 + 12302 GSDRIKDGY 9 84 505.748693706468 1009.482834479736 2 505.7489807009697 MULTI CID FTMS 0 0 0 3446 244101.4375 0.1741410996524778 -9 0.2131977081298828 3 Unmodified _GSDRIKDGY_ ENSG00000204856|ENST00000377673|FAM216A;ENST00000538285.6_1_12:110906680-110924532:+|nuORF;ENST00000548869.1_1_12:110906313-110924532:+|nuORF 43.9818466556824 0.0535980856389242 2 [SG]DR{I|L}KDGY 9 0 + 53.609 0.0 0.0 5.3105 5.3105 87.83 0.0 0.0 0.0 5.332335716671267 48.12401711267727 5.332335716671267 17.21848749616356 0 1.960409376976188 0.7695510786217261 0.4247425010840047 0.0 + + [SG]DR{I|L}KDGY;[SG]DR{I|L}[VG]SGY 5.3105;3.6048 +;- + 86 1 2.292 64241.7 1.0 573 2874 3446 DOHH2_400M_050219_2,3449 DOHH2_400M_050219_2,3449,GSDRIKDGY True True GSDRIKDGY 16.422938 505.74898070097 12753578.0 3446.0 ENST00000548869.1_1_12:110906313-110924532:+|nuORF;;ENST00000538285.6_1_12:110906680-110924532:+|nuORF;;ENSG00000204856|ENST00000377673|FAM216A 5.934802691141765 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3450 16.437 800.0 181870.0 25 0 18999.0 + 18060 KTDLHNEGY 9 151 538.7539106548572 1075.4932683765144 2 538.7541992068291 MULTI CID FTMS 0 0 0 3446 83586.328125 0.0153485551498051 -19 0.6088066101074219 4 Unmodified _KTDLHNEGY_ ENSG00000131378|ENST00000334133|RFTN1 143.21322497773306 0.029992591041815 2 [KT]D{I|L}HNEGY 9 0 + 83.171 0.0 0.0 7.7333 7.7333 87.396 0.0 0.0 0.0 5.8234873648015935 16.478174818886373 5.8234873648015935 5.8234873648015935 0 2.193672679568534 0.0 0.2215141619232908 2.343569022618561 + + [KT]D{I|L}HNEGY;[H{I|L}]DTKNEGY;[KT]D{I|L}HGGEGY;[H{I|L}]DTKGGEGY;{[QD]|[EN]|[WG]|[KD]|[RS]}HTVKEGY;[H{I|L}]DTNKEGY;{[QD]|[EN]|[WG]|[KD]|[RS]}H{I|L}SKEGY;{[CT]|[{M(Oxidation (M))|F}G]}[YV]KNEGY;[HN]ETVKEGY;{[QD]|[EN]|[WG]|[KD]|[RS]}HTVEKGY 7.7333;7.1918;6.8771;6.3356;6.0633;5.8974;5.5445;5.5278;5.2604;5.2247 +;-;-;-;-;-;-;-;-;- + 4333 1 2.292 113437.6 0.4699999988079071 574 2874 3446 DOHH2_400M_050219_2,3450 DOHH2_400M_050219_2,3450,KTDLHNEGY True True KTDLHNEGY 16.436771 538.754199206829 73510110.0 3446.0 ENSG00000131378|ENST00000334133|RFTN1 8.194539864857992 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3453 16.454 617.0 101990.0 25 0 7844.3 + 25169 MSEDKPQDY 9 110 564.7289694276812 1127.4433859221624 2 564.7293578982353 MULTI CID FTMS 0 0 0 3452 107445.7421875 0.602606159343802 3 -0.0796623229980468 1 Oxidation (M) _M(Oxidation (M))SEDKPQDY_ ENSG00000168036|ENST00000349496|CTNNB1;ENST00000465552.1_1_3:41277978-41278230:+|nuORF;ENST00000485265.1_1_3:41277322-41278230:+|nuORF 49.55428908609986 0.0413471690215031 2 {M(Oxidation (M))|F}SEDK[QP]DY 9 0 + 73.859 0.0 0.0 6.551 6.551 93.416 0.0 0.0 0.0 39.12250488045929 16.47817481888638 16.47817481888638 23.94856574903607 0 0.9698565171985376 0.0 0.75 0.3807196863200844 + + {M(Oxidation (M))|F}SEDK[QP]DY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WT]|[RM]}KDESE;{[QD]|[EN]|[WG]|[KD]|[RS]}{[YD]|[{M(Oxidation (M))|F}M]}KDESE;{M(Oxidation (M))|F}SEDK[WM]W;{M(Oxidation (M))|F}SWW[QP]DY;AAT{[YD]|[{M(Oxidation (M))|F}M]}KDESE;{M(Oxidation (M))|F}SE[YK][YE]Y;{[QD]|[EN]|[WG]|[KD]|[RS]}DD[YK]ESE;[QP]DTAA[Y{M(Oxidation (M))|F}]SE;AAT[CS]M{[TV]|[{I|L}S]}ESE 6.551;4.4269;4.3562;4.3071;4.2036;4.1696;3.7574;2.4256;2.4235;2.1661 +;-;-;-;-;-;-;-;-;- + 357 + 1 2.292 53224.9 1.0 575 2876 3452 DOHH2_400M_050219_2,3453 DOHH2_400M_050219_2,3453,MSEDKPQDY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3454 16.458 182.0 380420.0 25 0 50876.0 + -1 EKPWRAMK 8 98 531.2801430260728 1060.5457331189457 2 531.7842895388603 MULTI CID FTMS 0 0 0 3452 280081.25 0.975694722271664 3 -0.0796623229980468 2 Oxidation (M) _EKPWRAM(Oxidation (M))K_ REV__nc|ENSG00000130635|P20908-2|COL5A1 9.347437153973935 0.7675937258251505 2 KT[RH][WP]K 7 -1 18.715 0.0 0.0 1.7646 0.0 0.0 108.9952225908408 0.0 108.9952225908408 0.0 7.03234439706371 0.0 0.0 0 0.0 0.0 0.0 0.5994850021680094 KT[RH][WP]K 1.7646 - 116 + 1 2.292 60034.7 1.0 576 2876 3452 DOHH2_400M_050219_2,3454 DOHH2_400M_050219_2,3454,EKPWRAMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3455 16.467 555.0 163100.0 25 0 16222.0 7456 EGPKETPSSAN 11 97 558.7619247807563 1115.5092966283123 2 558.7615844607353 MULTI CID FTMS 0 0 0 3452 145030.328125 0.3769747845235475 -3 0.0613689422607421 3 Unmodified _EGPKETPSSAN_ ENSG00000151929|ENST00000369085|BAG3 42.312485326615175 0.1767732348921932 2 {[DA]|[EG]}[{I|L}V]DPSQSAN 11 5 + 88.492 0.0 0.0 7.9328 7.9328 94.336 0.0 0.0 0.0 11.293035420107486 62.34524264304187 11.293035420107486 12.623348264491083 0 1.5 1.154901959985743 1.424742501084005 0.3494850021680094 {[DA]|[EG]}[{I|L}V]DPSQSAN;{[DA]|[EG]}[{I|L}V]DPS[AG]SAN;[PS][{I|L}T]DPSQSAN;[DP]EVVASQSAN;[PS][{I|L}T]DPS[AG]SAN;[DP]EVVAS[AG]SAN;{[DA]|[EG]}[{I|L}V]D[VG]QDAN;C(Carbamidomethyl (C))AS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[H{I|L}]SAN;[PS][{I|L}T]D[VG]QDAN;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}V]{[RE]|[WV]}SAN 7.9328;6.8012;6.5727;6.0438;5.441;4.9122;4.659;4.4315;3.2988;3.2366 -;-;-;-;-;-;-;-;-;- 643 1 2.292 76022.0 1.0 577 2876 3452 DOHH2_400M_050219_2,3455 DOHH2_400M_050219_2,3455,EGPKETPSSAN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3457 16.473 179.0 355900.0 25 0 30443.0 + 8410 ESEPGRGAQY 10 87 547.2494351416589 1092.4843173501176 2 547.2491332888603 MULTI CID FTMS 0 0 0 3456 293089.6875 0.3956154286334716 11 -0.1186447143554687 1 Unmodified _ESEPGRGAQY_ ENSG00000112651|ENST00000388752|MRPL2;ENST00000491898.5_1_6:43023605-43023818:-|nuORF 24.020572477871973 0.4289996903560794 2 {[ES]|[DT]|[{I|L}C]}E{[CP]|[EA]}T[HK]Y 9 5 + 23.618 0.0 0.0 2.1619 2.1619 72.941 0.0 0.0 0.0 5.430599746173215 5.241049764686139 5.241049764686139 7.513487579716767 0 0.3494850021680094 0.0 0.2742275032520141 0.4247425010840047 {[ES]|[DT]|[{I|L}C]}E{[CP]|[EA]}T[HK]Y;{[ES]|[DT]|[{I|L}C]}EPCKK{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[ES]|[DT]|[{I|L}C]}E{[CP]|[EA]}[KQ]{[WS]|[C(Carbamidomethyl (C)){I|L}]};[QA][WC(Carbamidomethyl (C))]T[HK]Y;{[ES]|[DT]|[{I|L}C]}EPT[R{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]};{[ES]|[DT]|[{I|L}C]}[TP]MT[HK]Y;[QA]QA{M(Oxidation (M))|F}T{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]};{[ES]|[DT]|[{I|L}C]}[RP]P{[ES]|[DT]|[{I|L}C]}EY;{[ES]|[DT]|[{I|L}C]}E[NS][RV]{[WS]|[C(Carbamidomethyl (C)){I|L}]};[QA]Y{[{M(Oxidation (M))|F}H]|[RQ]}[HK]Y 2.1619;1.4741;1.1997;1.1358;1.0648;1.0608;0.9021;0.66591;0.64862;0.6092 -;-;-;-;-;-;-;-;-;- 417 + 1 2.292 53422.4 1.0 578 2877 3456 DOHH2_400M_050219_2,3457 DOHH2_400M_050219_2,3457,ESEPGRGAQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3458 16.479 329.0 260480.0 25 0 25962.0 + 7786 ELHEKLNEK 9 117 380.53998669376415 1138.5981306814924 3 380.5400573611259 MULTI CID FTMS 0 0 0 3456 158706.40625 1.0 0 0.0 2 Unmodified _ELHEKLNEK_ REV__ENST00000382952.7_2_4:1205601-1205772:-|nuORF 10.799506525563784 0.5443532743200366 2 [VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]{I|L}K 11 -1 + 31.901 0.0 0.0 2.8018 2.8018 71.091 0.0 0.0 0.0 7.978657264194219 -5.3806197239946165 -5.3806197239946165 4.77121254719663 0 0.6677353201839438 2.0 0.1923877696554315 0.0 [VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]{I|L}K;[VS]AG{M(Oxidation (M))|F}AA[Y{I|L}]{I|L}K;[VS]AS{[MG]|[TS]}V[{M(Oxidation (M))|F}T]{I|L}K;[VS]AS{[MG]|[TS]}V[R{M(Oxidation (M))|F}][VS];[VS]AS{[MG]|[TS]}A[Y{I|L}]{I|L}K;[VS]AS{[WT]|[RM]}[{M(Oxidation (M))|F}T]{I|L}K;[WK]HVD[WR]{I|L};[VS]AS{[WT]|[RM]}[R{M(Oxidation (M))|F}][VS];[VS]AS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[Y{I|L}]{I|L}K;[WK]H[RN]AAEK 2.8018;2.3827;2.1222;1.8814;1.7032;1.5447;1.3441;1.3039;1.1257;0.95318 -;-;-;-;-;-;-;-;-;- 571 1 2.292 72793.3 1.0 579 2877 3456 DOHH2_400M_050219_2,3458 DOHH2_400M_050219_2,3458,ELHEKLNEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3459 16.481 85.0 1150900.0 25 0 252400.0 + 27313 PHPHGREALPV 11 64 403.8878185392703 1208.641626218011 3 403.8876220583916 MULTI CID FTMS 0 0 0 3456 410076.28125 0.1142358167967702 -17 0.4700222015380859 3 Unmodified _PHPHGREALPV_ ENST00000400451.6_1_22:20760237-20760540:+|nuORF 9.38312468134398 0.8308777417566128 2 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 7 9 34.537 0.0 0.0 2.8575 0.0 0.0 0.0 266.1629732721313 266.1629732721313 18.691577868965155 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 2.8575 - 116 + 1 2.292 81930.2 1.0 580 2877 3456 DOHH2_400M_050219_2,3459 DOHH2_400M_050219_2,3459,PHPHGREALPV False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3460 16.495 800.0 88962.0 25 0 5642.8 17396 KMLEMQHLSGQ 11 107 651.3206371151645 1300.6267212971288 2 651.3208495974541 MULTI CID FTMS 0 0 0 3456 92546.25 0.9638190338214404 -1 0.0265884399414062 4 Unmodified _KMLEMQHLSGQ_ ENST00000504225.1_1_5:180278346-180278472:-|nuORF;ENST00000506377.5_1_5:180275075-180278472:-|nuORF 22.65808497894818 0.560183898709508 2 PSQSAN 6 9 66.363 0.0 0.0 5.1024 0.0 0.0 698.3600499677647 0.0 698.3600499677647 0.0 49.373212897245295 0.0 0.0 0 1.274227503252014 0.0 1.1989700043360187 0.3494850021680094 PSQSAN 5.1024 - 261 1 2.292 56867.7 0.4699999988079071 581 2877 3456 DOHH2_400M_050219_2,3460 DOHH2_400M_050219_2,3460,KMLEMQHLSGQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3462 16.503 315.0 246380.0 25 0 18815.0 + 32777 SEEDARKNF 9 102 365.8409166450347 1094.5009205353042 3 366.1758911013603 MULTI CID FTMS 0 0 0 3461 91035.796875 1.0 0 0.0 1 Unmodified _SEEDARKNF_ ENSG00000013374|ENST00000568733|NUB1;ENST00000470316.5_1_7:151049232-151057334:+|nuORF;nc|ENSG00000013374|Q9Y5A7-2|NUB1 10.799506525563784 0.5443532743200366 2 {M(Oxidation (M))|F}ES 3 8 23.812 0.0 0.0 2.1756 0.0 0.0 713.3494740216812 0.0 713.3494740216812 0.0 10.713337517843655 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}ES 2.1756 - 59 1 2.292 67007.3 1.0 582 2878 3461 DOHH2_400M_050219_2,3462 DOHH2_400M_050219_2,3462,SEEDARKNF False True SEEDARKNF 16.503243 365.8419 546034.125 3461.0 ENST00000470316.5_1_7:151049232-151057334:+|nuORF;;nc|ENSG00000013374|Q9Y5A7-2|NUB1;;ENSG00000013374|ENST00000568733|NUB1 2.9087745745976767 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3463 16.506 166.0 476330.0 25 0 68700.0 + 18063 KTDLHNEGY 9 93 359.50505482875553 1075.4933350864667 3 359.5049011111259 MULTI CID FTMS 0 0 0 3461 285295.3125 0.3073111608942546 -16 0.4172897338867187 2 Unmodified _KTDLHNEGY_ ENSG00000131378|ENST00000334133|RFTN1 9.38312468134398 0.5871240394367778 2 NK{[RE]|[WV]}Y 5 7 23.456 0.0 0.0 2.1809 0.0 0.0 367.13793283878914 0.0 367.13793283878914 0.0 9.643331241078172 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 NK{[RE]|[WV]}Y 2.1809 - 208 + 1 2.292 68290.7 1.0 583 2878 3461 DOHH2_400M_050219_2,3463 DOHH2_400M_050219_2,3463,KTDLHNEGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3464 16.52 800.0 189810.0 25 0 20609.0 + 37199 TIHFSRHGGVV 11 95 605.3280951101373 1208.6416372870744 2 605.3289672732353 MULTI CID FTMS 0 0 0 3461 95564.125 0.175353393007521 -24 0.7120847702026367 3 Unmodified _TIHFSRHGGVV_ REV__ENSG00000196208|ENST00000381486|GREB1;REV__nc|ENSG00000196208|Q4ZG55-4|GREB1 20.41453444215458 0.6105011870913812 2 [{I|L}T]HPPEH 7 -1 36.445 0.0 0.0 3.0154 0.0 0.0 0.0 394.2199801080688 394.2199801080688 23.6805849223364 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3252574989159953 0.0 [{I|L}T]HPPEH 3.0154 - 237 + 1 2.292 114828.8 0.4799999892711639 584 2878 3461 DOHH2_400M_050219_2,3464 DOHH2_400M_050219_2,3464,TIHFSRHGGVV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3467 16.541 800.0 112530.0 25 0 8908.9 + 31479 RPWYWEWCTWQ 11 94 820.855702426205 1639.6968519192098 2 820.8551513552666 MULTI CID FTMS 0 0 0 3466 140929.375 0.113644187004101 17 -0.1208343505859375 1 Unmodified _RPWYWEWCTWQ_ REV__ENST00000409198.5_2_2:152506865-152507290:-|nuORF 0.2690200627634905 0.8738786812967896 2 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE 14 -1 + 92.817 0.0 0.0 5.6606 5.6606 74.514 0.0 0.0 0.0 66.79336373409495 5.473279071135877 5.473279071135877 0.199717405067858 0 1.337180496500464 0.0 2.930265894174725 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE;[EP]AEQGAA[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGGAE;{[CP]|[EA]}PEQGAA[EP]AEQGQE;[EP]AEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQ[RH][EP]AEQNAE;{[CP]|[EA]}PEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA[YV]YQ[HA]AE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQ[RH]{M(Oxidation (M))|F}AGGQ[HA]AE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQ[RH][EP]AEQGGAE 5.6606;5.6484;5.5755;5.5723;5.3171;5.2483;5.2409;5.2408;5.2201;5.1632 -;-;-;-;-;-;-;-;-;- 12291 + 1 2.292 68223.3 0.5299999713897705 585 2880 3466 DOHH2_400M_050219_2,3467 DOHH2_400M_050219_2,3467,RPWYWEWCTWQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3469 16.546 111.0 523120.0 25 0 85888.0 -1 EKKLQNTMK 9 68 568.310410964533 1134.606268995866 2 568.3107177615166 MULTI CID FTMS 0 0 0 3468 539790.25 0.9434751313540404 1 -0.0214519500732421 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 2 T[{I|L}P]T{M(Oxidation (M))|F}K 6 -1 48.333 0.0 0.0 4.2599 0.0 0.0 429.2350941388688 0.0 429.2350941388688 0.0 31.42667503568731 0.0 0.0 0 1.5 0.0 0.7302046884880937 0.0 T[{I|L}P]T{M(Oxidation (M))|F}K 4.2599 - 139 1 2.292 49375.4 1.0 586 2881 3468 DOHH2_400M_050219_2,3469 DOHH2_400M_050219_2,3469,EKKLQNTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3470 16.549 186.0 397880.0 25 0 64261.0 + -1 IQRLETMK 8 83 517.7865386590043 1033.5585243848086 2 517.7867309451103 MULTI CID FTMS 0 0 0 3468 284460.15625 0.1456046012635975 -29 0.8297653198242188 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 2 T{M(Oxidation (M))|F}K 3 -1 38.729 0.0 0.0 3.7471 0.0 0.0 639.3701770991958 0.0 639.3701770991958 0.0 19.892041018059736 0.0 0.0 0 1.305462187404089 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.7471 + + 154 1 2.292 62688.4 1.0 587 2881 3468 DOHH2_400M_050219_2,3470 DOHH2_400M_050219_2,3470,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3471 16.558 473.0 211630.0 25 0 24746.0 + + 14428 RTKVHAEL 8 98 477.28078971840085 952.5470265036016 2 477.2813598513603 MULTI CID FTMS 0 0 0 3468 108446.359375 0.7726546891966539 -1 0.016387939453125 3 Unmodified _IFPKQHAL_ ENST00000493855.1_1_7:56123379-56123520:+|nuORF;ENSG00000146731|ENST00000275603|CCT6A;nc|ENSG00000146731|P40227-2|CCT6A 7.910154910731844 0.7763180056447161 2 {I|L}{M(Oxidation (M))|F}A[RV]KGY 8 -1 + 31.324 0.0 0.0 3.2884 3.2884 82.158 0.0 0.0 0.0 17.34427538256881 3.663221256332292 3.663221256332292 30.98715885456198 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}A[RV]KGY;{[CT]|[{M(Oxidation (M))|F}G]}[RV][YK]A{I|L} 3.2884;0.035328 -;- 78 + 1 2.292 80703.5 1.0 588 2881 3468 DOHH2_400M_050219_2,3471 DOHH2_400M_050219_2,3471,IFPKQHAL False False RTKVHAEL 16.55786 477.28135985136 525248.5625 3468.0 ENST00000493855.1_1_7:56123379-56123520:+|nuORF;;ENSG00000146731|ENST00000275603|CCT6A;;nc|ENSG00000146731|P40227-2|CCT6A 3.347846746444702 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3472 16.562 228.0 267020.0 25 0 19607.0 + -1 KQQDKMTEI 9 112 379.52502117896586 1135.5532341370977 3 379.5248901247978 MULTI CID FTMS 0 0 0 3468 98056.8515625 0.6030735748899371 -2 0.0203971862792968 4 Oxidation (M) _KQQDKM(Oxidation (M))TEI_ REV__ENSG00000147010|ENST00000397821|SH3KBP1;REV__nc|ENSG00000147010|Q96B97-2|SH3KBP1;REV__nc|ENSG00000147010|Q96B97-3|SH3KBP1 5.296884461304476 0.7297726132274777 2 {I|L} 1 -1 13.495 0.0 0.0 1.1884 0.0 0.0 1004.4583530109244 0.0 1004.4583530109244 0.0 -5.445312593723983 -5.445312593723983 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1884 + + 75 + 1 2.292 54921.9 1.0 589 2881 3468 DOHH2_400M_050219_2,3472 DOHH2_400M_050219_2,3472,KQQDKMTEI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3482 16.603 370.0 262440.0 25 0 86365.0 + 22516 LPWAGEVK 8 71 450.2518239359176 0 450.2520019412041 PEAK CID FTMS 0 0 0 3481 143166.234375 1.0 0 0.0 1 Unmodified _LPWAGEVK_ REV__ENSG00000174136|ENST00000513185|RGMB;REV__ENST00000434027.2_1_5:98106159-98115843:+|nuORF;REV__ENST00000508978.1_1_5:98115639-98134278:+|nuORF 5.230669730166228 0.5807325378471833 2 Y 1 -1 6.9897 0.0 0.0 0.77794 0.0 0.0 632.3255711774646 100.07736383609608 732.4029350135606 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.77794 - 13 + 1 2.29 79658.9 1.0 590 2890 3481 DOHH2_400M_050219_2,3482 DOHH2_400M_050219_2,3482,LPWAGEVK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3485 16.613 188.0 240950.0 25 0 26449.0 + 18066 KTDPENTDY 9 85 541.7355552410199 1081.4565575488398 2 541.7355224490166 MULTI CID FTMS 0 0 0 3484 269493.78125 0.236564297212811 15 -0.0960502624511718 1 Unmodified _KTDPENTDY_ ENSG00000105248|ENST00000262962|YJU2 49.55428908609986 0.0413471690215031 2 [EP]NTDKTDY 9 6 + 80.159 0.0 0.0 7.4121 7.4121 93.242 0.0 0.0 0.0 13.31501663649901 16.478174818886366 13.31501663649901 11.604705826628177 0 0.9247425010840048 1.0969100130080565 0.6421590589602533 1.5138793319624575 [EP]NTDKTDY;[EP]GGTDKTDY;{[ES]|[DT]|[{I|L}C]}PQDKTDY;{[ES]|[DT]|[{I|L}C]}K[EP]NTDY;[EP]NTV[SG]TDY;[KT]D[EP]NTDY;{[QS]|[NT]}[EP]DKTDY;{[ES]|[DT]|[{I|L}C]}K[EP]GGTDY;[KT]D[EP]GGTDY;{[ES]|[DT]|[{I|L}C]}PQV[SG]TDY 7.4121;6.339;6.1809;5.98;5.8071;5.612;5.6083;5.1285;4.7605;4.5759 -;-;-;-;-;+;-;-;-;- + 307 1 2.29 45173.0 1.0 591 2892 3484 DOHH2_400M_050219_2,3485 DOHH2_400M_050219_2,3485,KTDPENTDY True True KTDPENTDY 16.613109 541.735522449017 10664495.0 3484.0 ENSG00000105248|ENST00000262962|YJU2 7.510527928670247 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3489 16.626 46.0 942840.0 25 0 73744.0 + 11297 GEVEQQRTY 9 64 555.2648750419579 1108.5151971507155 2 555.2648193240166 MULTI CID FTMS 0 0 0 3488 1052006.875 0.4757290460417465 14 -0.1361579895019531 1 Unmodified _GEVEQQRTY_ ENSG00000178691|ENST00000322652|SUZ12;ENST00000578106.1_1_17:30321573-30326019:+|nuORF 66.45667989310934 0.0225072657982126 2 {[DA]|[EG]}VEQQRTY 9 0 + 93.427 0.0 0.0 8.4281 8.4281 92.981 0.0 0.0 0.0 79.61426266193143 12.587418566968154 12.587418566968154 9.208187539523747 0 1.0 1.6989700043360187 0.805462187404089 1.1549471895720984 + + {[DA]|[EG]}VEQQRTY;{[DA]|[EG]}VEQ[AG]RTY;{[DA]|[EG]}VE[AG]QRTY;{[DA]|[EG]}VE[AG][AG]RTY;WV{M(Oxidation (M))|F}[HT]RTY;{[DA]|[EG]}V[YT]QE{[{M(Oxidation (M))|F}H]|[RQ]};{[DA]|[EG]}V[YT][AG]E{[{M(Oxidation (M))|F}H]|[RQ]};{NN|[MP]|[D{I|L}]|[EV]}G[YT]QE{[{M(Oxidation (M))|F}H]|[RQ]};{NN|[MP]|[D{I|L}]|[EV]}G[YT][AG]E{[{M(Oxidation (M))|F}H]|[RQ]} 8.4281;7.5974;7.5974;6.7707;4.8387;3.5481;2.7174;2.554;1.7233 +;-;-;-;-;-;-;-;- + 166 + 1 2.29 44025.7 1.0 592 2895 3488 DOHH2_400M_050219_2,3489 DOHH2_400M_050219_2,3489,GEVEQQRTY True True GEVEQQRTY 16.625761 555.264819324017 20136658.0 3488.0 ENST00000578106.1_1_17:30321573-30326019:+|nuORF;;ENSG00000178691|ENST00000322652|SUZ12 7.515939076741536 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3490 16.633 421.0 256850.0 25 0 123010.0 -1 0 72 472.2729188987773 471.2656424321773 1 472.2727538943291 MULTI CID FTMS 0 0 0 3488 205297.6875 0.7411386086730304 17 -0.1505012512207031 2 2 M 1 -1 12.764 0.0 0.0 2.7085 0.0 0.0 322.2145387718242 0.0 322.2145387718242 0.0 1.170416030166841 0.0 0.0 0 0.0 0.0 0.0 0.0 M 2.7085 - 4 + 1 2.29 93117.6 1.0 593 2895 3488 DOHH2_400M_050219_2,3490 DOHH2_400M_050219_2,3490, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3491 16.641 442.0 200020.0 25 0 14103.0 + -1 AESDIMKRQ 9 133 365.1817116509792 1092.5233055531376 3 365.1816589236259 MULTI CID FTMS 0 0 0 3488 76943.421875 0.9097842126159474 -5 0.0270729064941406 3 Oxidation (M) _AESDIM(Oxidation (M))KRQ_ ENSG00000105409|ENST00000648268|ATP1A3;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000163399|ENST00000295598|ATP1A1;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000018625|ENST00000361216|ATP1A2;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000105409|P13637-2|ATP1A3 8.444304893310646 0.6198977621250997 2 {[CP]|[EA]}{[DS]|[MA]|[CV]|TT}{I|L}{M(Oxidation (M))|F}KRQ 9 -1 + 21.059 0.0 0.0 1.9275 1.9275 76.911 0.0 0.0 0.0 9.275838663490244 3.8912526452017886 3.8912526452017886 10.579919469776865 0 0.2396518287104437 0.0 0.0 0.0 {[CP]|[EA]}{[DS]|[MA]|[CV]|TT}{I|L}{M(Oxidation (M))|F}KRQ;{[CP]|[EA]}{[DS]|[MA]|[CV]|TT}{I|L}{M(Oxidation (M))|F}[W{I|L}]{I|L} 1.9275;0.95912 +;- + 103 + 1 2.29 72660.2 1.0 594 2895 3488 DOHH2_400M_050219_2,3491 DOHH2_400M_050219_2,3491,AESDIMKRQ False False AESDIMKRQ 16.641118 365.181658923626 635684.5625 3488.0 ENSG00000105409|ENST00000648268|ATP1A3;;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;;ENSG00000163399|ENST00000295598|ATP1A1;;nc|ENSG00000105409|P13637-3|ATP1A3;;nc|ENSG00000163399|P05023-4|ATP1A1;;ENSG00000018625|ENST00000361216|ATP1A2;;nc|ENSG00000163399|P05023-3|ATP1A1;;nc|ENSG00000105409|P13637-2|ATP1A3 0.9842038154602052 3.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3494 16.653 281.0 241670.0 25 0 26965.0 + 32804 SEFEGHKRI 9 115 368.1928658432826 1101.556768130048 3 368.1932556033134 MULTI CID FTMS 0 0 0 3493 47326.484375 0.4958982196243829 1 -0.0077152252197265 1 Unmodified _SEFEGHKRI_ ENSG00000106948|ENST00000374088|AKNA;nc|ENSG00000106948|Q7Z591-2|AKNA;nc|ENSG00000106948|Q7Z591-5|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA;nc|ENSG00000106948|Q7Z591-8|AKNA 22.736283301280096 0.2418982879461534 2 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}EGH 6 3 28.249 0.0 0.0 2.5645 0.0 0.0 0.0 412.2682283990844 412.2682283990844 14.269856214892371 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.5 0.0 + {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}EGH 2.5645 + + 52 + 1 2.29 60596.4 1.0 595 2897 3493 DOHH2_400M_050219_2,3494 DOHH2_400M_050219_2,3494,SEFEGHKRI False True SEFEGHKRI 16.652878 368.193255603313 753272.5 3493.0 nc|ENSG00000106948|Q7Z591-7|AKNA;;nc|ENSG00000106948|Q7Z591-2|AKNA;;ENSG00000106948|ENST00000374088|AKNA;;nc|ENSG00000106948|Q7Z591-8|AKNA;;nc|ENSG00000106948|Q7Z591-5|AKNA 2.360015630722046 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3500 16.674 99.0 557590.0 25 0 69416.0 + 12303 GSDRIKDGY 9 70 505.748693706468 1009.482834479736 2 505.7488891482353 MULTI CID FTMS 0 0 0 3499 415902.34375 0.2967032567707343 19 -0.186431884765625 1 Unmodified _GSDRIKDGY_ ENSG00000204856|ENST00000377673|FAM216A;ENST00000538285.6_1_12:110906680-110924532:+|nuORF;ENST00000548869.1_1_12:110906313-110924532:+|nuORF 28.49450938151212 0.1686335738423394 2 [SG][RD]{I|L}KDGY 9 0 + 40.534 0.0 0.0 4.0154 4.0154 84.851 0.0 0.0 0.0 1.2056059393855063 31.582071991942883 1.2056059393855063 40.53449691922973 0 1.1549471895720984 1.0457574905606752 0.4247425010840047 0.0 + + [SG][RD]{I|L}KDGY 4.0154 + + 36 1 2.29 47859.8 1.0 596 2902 3499 DOHH2_400M_050219_2,3500 DOHH2_400M_050219_2,3500,GSDRIKDGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3501 16.68 338.0 227490.0 25 0 24211.0 + 6786 EEAGGRPAM 9 117 459.2110555713279 916.4075582094556 2 459.2098876833916 MULTI CID FTMS 0 0 0 3499 111504.953125 0.5184597923811882 -10 0.0617866516113281 2 Unmodified _EEAGGRPAM_ ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU 28.486842064014134 0.1687311288560894 2 EEAGA 5 4 45.106 0.0 0.0 4.922 0.0 0.0 0.0 456.2058199518188 456.2058199518188 30.50164862636605 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 EEAGA 4.922 - 220 + 1 2.29 63565.1 1.0 597 2902 3499 DOHH2_400M_050219_2,3501 DOHH2_400M_050219_2,3501,EEAGGRPAM False True EEAGGRPAM 16.679632 459.209887683392 1112730.625 3499.0 ENSG00000153187|ENST00000640218|HNRNPU;;nc|ENSG00000153187|Q00839-2|HNRNPU;;ENST00000476241.2_2_1:245025757-245027609:-|nuORF 7.34818172454834 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3503 16.684 17.0 2406000.0 25 0 318370.0 + 18061 KTDLHNEGY 9 83 538.7539106548572 1075.4932683765144 2 538.7541381716728 MULTI CID FTMS 0 0 0 3502 3191426.75 0.586026334422598 10 -0.0958614349365234 1 Unmodified _KTDLHNEGY_ ENSG00000131378|ENST00000334133|RFTN1 37.07464296494664 0.0915153923251136 2 STKGY 5 6 46.186 0.0 0.0 4.2944 0.0 0.0 521.2269154279312 0.0 521.2269154279312 0.0 12.028937514676484 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 STKGY 4.2944 - 239 1 2.29 34546.7 1.0 598 2903 3502 DOHH2_400M_050219_2,3503 DOHH2_400M_050219_2,3503,KTDLHNEGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3504 16.691 340.0 210750.0 25 0 34380.0 + 7204 EEGAVDKSY 9 98 499.2273583957796 996.4401638583593 2 499.2274963259697 MULTI CID FTMS 0 0 0 3502 115183.7578125 0.3157197165830959 -13 0.085733413696289 2 Unmodified _EEQLSQTY_ nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 26.88365393820708 0.4786498634179528 2 EEQVDKSY 8 4 + 42.16 0.0 0.0 4.2311 4.2311 81.185 0.0 0.0 0.0 18.928904003842284 7.571848481292029 7.571848481292029 9.262137858390808 0 0.25 2.0 0.0 0.0 EEQVDKSY;EE[AG]VDKSY;EEQV[HM][QP];EEQ[HM]V[QP];EE[RP]VQ[HC];EE[AG]V[HM][QP];EE[AG][HM]V[QP];EE[RP]V[AG][HC];[AG]PS[QA]VQ[HC];[DP][{I|L}A]DVQ[HC] 4.2311;3.3016;2.8465;2.7492;2.4216;1.917;1.8197;1.4921;1.0449;0.79119 -;-;-;-;-;-;-;-;-;- 398 + 1 2.29 62584.8 1.0 599 2903 3502 DOHH2_400M_050219_2,3504 DOHH2_400M_050219_2,3504,EEQLSQTY False False EEGAVDKSY 16.690953 499.22749632597 1537631.125 3502.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 5.157514254252116 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3509 16.719 800.0 85632.0 25 0 17524.0 -1 ICMHNMECS 9 89 570.7002695582423 1139.3859861832846 2 570.7007324099541 MULTI CID FTMS 0 0 0 3508 68043.7265625 0.6844722294174157 -11 0.0618476867675781 1 Carbamidomethyl (C),Oxidation (M) _IC(Carbamidomethyl (C))M(Oxidation (M))HNMECS_ ENST00000502840.5_1_5:130651700-130651793:+|nuORF 2.059750862983233 0.8427793054688888 2 Y 1 -1 12.218 0.0 0.0 1.0724 0.0 0.0 958.31179597508 0.0 958.31179597508 0.0 2.540777442298152 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0724 - 37 + 1 2.29 58753.2 0.5 600 2907 3508 DOHH2_400M_050219_2,3509 DOHH2_400M_050219_2,3509,ICMHNMECS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3510 16.733 800.0 172330.0 25 0 29592.0 + 8586 ETTYPQLLP 9 120 531.2801430260728 1060.5457331189457 2 531.2775756716728 MULTI CID FTMS 0 0 0 3508 124723.7890625 0.6484926404908392 13 -0.1481037139892578 2 Unmodified _ETTYPQLLP_ REV__ENSG00000154114|ENST00000683345|TBCEL 36.04419817259434 0.0971720506436186 2 H{[YC]|[HE]}[WP]K 6 -1 29.13 0.0 0.0 2.7467 0.0 0.0 228.1519396470761 0.0 228.1519396470761 0.0 3.84765960235114 0.0 0.0 0 0.8494850021680094 0.0 0.6747425010840047 1.024227503252014 H{[YC]|[HE]}[WP]K 2.7467 - 703 + 1 2.29 109275.2 0.5799999833106995 601 2907 3508 DOHH2_400M_050219_2,3510 DOHH2_400M_050219_2,3510,ETTYPQLLP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3512 16.738 14.0 4244500.0 25 0 369730.0 28126 PPPLCRPLVSM 11 70 403.8878185392703 1208.641626218011 3 403.8877136111259 MULTI CID FTMS 0 0 0 3511 2971059.5 0.8276543273844955 14 -0.1259765625 1 Unmodified _PPPLCRPLVSM_ ENSG00000132518|ENST00000254854|GUCY2D 12.240655878213236 0.7805268987462184 2 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 9 39.226 0.0 0.0 3.2454 0.0 0.0 0.0 394.2208350369432 394.2208350369432 28.11629054940952 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 3.2454 - 173 + 1 2.29 54827.5 1.0 602 2908 3511 DOHH2_400M_050219_2,3512 DOHH2_400M_050219_2,3512,PPPLCRPLVSM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3513 16.743 287.0 207220.0 25 0 19158.0 + 8411 ESEPGRGAQY 10 89 547.2494351416589 1092.4843173501176 2 547.2487060427666 MULTI CID FTMS 0 0 0 3511 147816.140625 0.1995237237144513 42 -0.5193309783935547 2 Unmodified _ESEPGRGAQY_ ENSG00000112651|ENST00000388752|MRPL2;ENST00000491898.5_1_6:43023605-43023818:-|nuORF 34.40172386719151 0.2166836008404837 2 {[ES]|[DT]|[{I|L}C]}E{[CP]|[EA]}T[HK]Y 9 5 + 40.193 0.0 0.0 3.6791 3.6791 81.68 0.0 0.0 0.0 24.875977872132324 14.515449934959715 14.515449934959715 16.478174818886373 0 0.6549471895720985 0.0 0.3252574989159953 0.4247425010840047 {[ES]|[DT]|[{I|L}C]}E{[CP]|[EA]}T[HK]Y;[QA][WC(Carbamidomethyl (C))]T[HK]Y;[QA]Y{[{M(Oxidation (M))|F}H]|[RQ]}[HK]Y;{[ES]|[DT]|[{I|L}C]}E{[CP]|[EA]}T{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]};{[ES]|[DT]|[{I|L}C]}E{[CP]|[EA]}[KQ]{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[ES]|[DT]|[{I|L}C]}EPT[R{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]};{[ES]|[DT]|[{I|L}C]}E{[TV]|[{I|L}S]}QQ{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{M(Oxidation (M))|F}V][R{M(Oxidation (M))|F}]Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y;[QA][WC(Carbamidomethyl (C))]T{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]} 3.6791;2.1708;1.5975;1.5724;1.4531;1.344;0.94746;0.24538;0.059122 -;-;-;-;-;-;-;-;- 218 + 1 2.29 51678.6 1.0 603 2908 3511 DOHH2_400M_050219_2,3513 DOHH2_400M_050219_2,3513,ESEPGRGAQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3514 16.757 800.0 98173.0 25 0 7780.8 + 7457 EGPKETPSSAN 11 115 558.7619247807563 1115.5092966283123 2 558.7621337771416 MULTI CID FTMS 0 0 0 3511 96344.109375 0.2504255512712521 29 -0.3537120819091797 3 Unmodified _EGPKETPSSAN_ ENSG00000151929|ENST00000369085|BAG3 32.89776655970281 0.3218023389984559 2 {[DA]|[EG]}[{I|L}V]DPSQSAN 11 5 + 69.985 0.0 0.0 6.2738 6.2738 85.563 0.0 0.0 0.0 7.3239375982296835 9.128498242810991 7.3239375982296835 7.3239375982296835 0 0.9247425010840048 1.0 1.0 0.3807196863200844 {[DA]|[EG]}[{I|L}V]DPSQSAN;[VG]{[QN]|[E{I|L}]|[KN]}DPSQSAN;{[DA]|[EG]}[{I|L}V]DPS[AG]SAN;[VG]{[QN]|[E{I|L}]|[KN]}DPS[AG]SAN;[HT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PSQSAN;[HT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PS[AG]SAN;[EP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DV]QSAN;[EP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WR]SAN;[EP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{[RE]|[WV]}SAN;[EP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WK]DAN 6.2738;5.6173;5.1142;4.7989;4.7879;3.9663;2.6192;1.8553;1.6833;0.86339 -;-;-;-;-;-;-;-;-;- 476 1 2.29 63590.7 0.5 604 2908 3511 DOHH2_400M_050219_2,3514 DOHH2_400M_050219_2,3514,EGPKETPSSAN False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3516 16.763 148.0 440360.0 25 0 46861.0 + -1 AESDIMKRQ 9 88 359.50505482875553 1075.4933350864667 3 359.5049621462822 MULTI CID FTMS 0 0 0 3515 213909.578125 0.2304166872001936 15 -0.1099472045898437 1 Carbamidomethyl (C) _HLAWVAC(Carbamidomethyl (C))GY_ ENSG00000105409|ENST00000648268|ATP1A3;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000163399|ENST00000295598|ATP1A1;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000018625|ENST00000361216|ATP1A2;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000105409|P13637-2|ATP1A3 9.38312468134398 0.5871240394367778 2 KM{M(Oxidation (M))|F}[WY] 5 -1 18.188 0.0 0.0 1.6911 0.0 0.0 302.1688709943375 0.0 302.1688709943375 0.0 3.5834938564822494 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 KM{M(Oxidation (M))|F}[WY] 1.6911 - 82 1 2.29 57237.8 1.0 605 2909 3515 DOHH2_400M_050219_2,3516 DOHH2_400M_050219_2,3516,HLAWVACGY False False AESDIMKRQ 16.762621 359.504962146282 852929.75 3515.0 ENSG00000105409|ENST00000648268|ATP1A3;;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;;ENSG00000163399|ENST00000295598|ATP1A1;;nc|ENSG00000105409|P13637-3|ATP1A3;;nc|ENSG00000163399|P05023-4|ATP1A1;;ENSG00000018625|ENST00000361216|ATP1A2;;nc|ENSG00000163399|P05023-3|ATP1A1;;nc|ENSG00000105409|P13637-2|ATP1A3 1.9495599269866943 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3518 16.767 106.0 488160.0 25 0 48013.0 19234 LEHQRDRQK 9 51 605.3280951101373 1208.6416372870744 2 605.3279296755791 MULTI CID FTMS 0 0 0 3517 356342.25 0.6538627608366038 8 -0.0805873870849609 1 Unmodified _LEHQRDRQK_ ENSG00000185352|ENST00000376705|HS6ST3 12.240655878213236 0.5053430591993562 2 {[QN]|[E{I|L}]|[KN]}H 3 6 27.447 0.0 0.0 2.2709 0.0 0.0 0.0 826.4338753330344 826.4338753330344 7.781512503836435 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {[QN]|[E{I|L}]|[KN]}H 2.2709 + + 54 + 1 2.29 44044.6 1.0 606 2910 3517 DOHH2_400M_050219_2,3518 DOHH2_400M_050219_2,3518,LEHQRDRQK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3522 16.792 800.0 85369.0 25 0 5118.6 + -1 RCCWQCRLWWS 11 85 820.8554518032049 1639.6963506732095 2 821.3566772341728 MULTI CID FTMS 0 0 0 3521 131117.90625 1.0 0 0.0 1 2 Carbamidomethyl (C) _RC(Carbamidomethyl (C))C(Carbamidomethyl (C))WQCRLWWS_ REV__ENST00000298292.12_1_14:50100549-50100927:-|nuORF 0.3070304955306653 0.8736993455979228 2 [EP]APNS{[SA]|[TG]}[EP]AEEGQQ 16 -1 + 90.364 0.0 0.0 5.511 5.511 87.153 0.0 0.0 0.0 11.42667503568731 7.659167939666318 7.659167939666318 11.42667503568731 0 0.8807196863200843 0.9208187539523752 0.3494850021680094 1.9802046884880933 [EP]APNS{[SA]|[TG]}[EP]AEEGQQ;{[CP]|[EA]}PPNS{[SA]|[TG]}[EP]AEEGQQ;[EP]APN[MN][EP]AEWQQ;[EP]AEQ[QA][EP]AEEGQQ;{[CP]|[EA]}PPNS{[SA]|[TG]}[EP]AEWQQ;HHGEEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;[EP]APNS[QP]TEEEGQQ;{[CP]|[EA]}PPN[MN][EP]AEWQQ;HHWEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;{[CP]|[EA]}PEQ[QA][EP]AEEGQQ 5.511;4.8141;4.6938;4.5051;4.4049;4.2686;4.0201;3.9969;3.862;3.8082 -;-;-;-;-;-;-;-;-;- 2405 1 2.29 53832.3 0.5199999809265137 607 2913 3521 DOHH2_400M_050219_2,3522 DOHH2_400M_050219_2,3522,RCCWQCRLWWS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3523 16.806 800.0 143230.0 25 0 22372.0 + -1 EEAGGRPAM 9 145 467.2080131535424 932.4014733738848 2 467.2087890505791 MULTI CID FTMS 0 0 0 3521 112201.1875 0.8882573712347832 -2 0.0080680847167968 2 Oxidation (M) _EEAGGRPAM(Oxidation (M))_ ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF 36.04419817259434 0.0971720506436186 2 EEAG{[NV]|[RG]}PA{M(Oxidation (M))|F} 9 -1 + 49.671 0.0 0.0 5.3272 5.3272 76.233 0.0 0.0 0.0 24.13734275855269 2.314761492627256 2.314761492627256 2.314761492627256 0 0.3807196863200844 1.6989700043360187 0.0 0.0 EEAG{[NV]|[RG]}PA{M(Oxidation (M))|F};EEAG{[NV]|[RG]}EW;EEQ{[NV]|[RG]}PA{M(Oxidation (M))|F};EEA[RN]PA{M(Oxidation (M))|F};EEA[RN]EW;EEQ{[NV]|[RG]}EW;EE[QP]{[NV]|[RG]}A{M(Oxidation (M))|F};EE[QP]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}[WR]GA[HC];[RN][W{M(Oxidation (M))|F}]A[HC] 5.3272;5.0789;4.6324;4.6324;4.3915;4.1111;2.3608;2.0379;1.8915;0.99546 +;-;-;-;-;-;-;-;-;- + 279 + 1 2.29 94221.5 0.550000011920929 608 2913 3521 DOHH2_400M_050219_2,3523 DOHH2_400M_050219_2,3523,EEAGGRPAM False False EEAGGRPAM 16.8057 467.208789050579 581770.8125 3521.0 ENSG00000153187|ENST00000640218|HNRNPU;;nc|ENSG00000153187|Q00839-2|HNRNPU;;ENST00000476241.2_2_1:245025757-245027609:-|nuORF 7.6802872021993 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3525 16.811 31.0 1936800.0 25 0 296260.0 + -1 IQRLETMK 8 81 517.7865386590043 1033.5585243848086 2 517.7869750857353 MULTI CID FTMS 0 0 0 3524 1756321.25 0.8989956929935886 4 -0.0375003814697265 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 2 KTT[{I|L}P][WP]K 8 -1 40.169 0.0 0.0 3.8865 0.0 0.0 63.99756919766964 0.0 63.99756919766964 0.0 29.19978440589176 0.0 0.0 0 0.8807196863200843 0.0 1.424742501084005 0.25 KTT[{I|L}P][WP]K 3.8865 - 81 + 1 2.297 54175.2 1.0 609 2914 3524 DOHH2_400M_050219_2,3525 DOHH2_400M_050219_2,3525,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3526 16.819 460.0 219460.0 25 0 30724.0 -1 EKKLQNTMK 9 91 568.310410964533 1134.606268995866 2 568.3107177615166 MULTI CID FTMS 0 0 0 3524 197806.546875 0.3457371780901559 34 -0.4165534973144531 2 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 2 [W{I|L}]W[RV]T{M(Oxidation (M))|F}K 8 -1 + 42.871 0.0 0.0 3.7785 3.7785 80.446 0.0 0.0 0.0 1.655010192627131 4.885402174376537 1.655010192627131 10.28228547580688 0 1.424742501084005 1.2218487496163564 0.3252574989159953 0.0 [W{I|L}]W[RV]T{M(Oxidation (M))|F}K;[W{I|L}][K{I|L}]ATE{M(Oxidation (M))|F}K;[RH]T[{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RP;[W{I|L}][VS][RV]TT{[CA]|SS};[W{I|L}]W[RV]R[YG];[RH]T[RV]WSPP;[HT]VG[{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RP;[HT]R[{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RP;[W{I|L}]W[RV]G[YR];[KT]T[{I|L}P]ATT[R{M(Oxidation (M))|F}] 3.7785;2.8723;2.1799;2.1068;1.4447;1.285;1.2323;1.1872;1.1794;1.0416 -;-;-;-;-;-;-;-;-;- 411 1 2.297 80822.8 1.0 610 2914 3524 DOHH2_400M_050219_2,3526 DOHH2_400M_050219_2,3526,EKKLQNTMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3530 16.843 800.0 125120.0 25 0 11031.0 + 14096 IAQERKTQL 9 109 543.8170259377566 1085.6194989423132 2 543.8169433474541 MULTI CID FTMS 0 0 0 3529 102656.9453125 0.5738783941576256 -8 0.0696983337402343 1 Unmodified _IAQERKTQL_ ENSG00000100023|ENST00000398831|PPIL2;ENST00000462188.1_1_22:22049070-22049360:+|nuORF;nc|ENSG00000100023|Q13356-2|PPIL2 62.86856922530385 0.024493861581232 2 {I|L}AQEKKESS 9 4 69.14 0.0 0.0 6.3687 0.0 0.0 0.0 82.06681238345936 82.06681238345936 53.543949450464666 0.0 0.0 0.0 0 1.305462187404089 2.0 0.8494850021680094 1.1549471895720984 {I|L}AQEKKESS 6.3687 - 915 + 1 2.297 81621.8 0.5199999809265137 611 2917 3529 DOHH2_400M_050219_2,3530 DOHH2_400M_050219_2,3530,IAQERKTQL True True IAQERKTQL 16.843204 543.816943347454 590205.5 3529.0 nc|ENSG00000100023|Q13356-2|PPIL2;;ENST00000462188.1_1_22:22049070-22049360:+|nuORF;;ENSG00000100023|ENST00000398831|PPIL2 5.957772254943848 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3539 16.888 800.0 151240.0 25 0 27293.0 + 6036 DSDRYRDGY 9 115 573.7441209472249 1145.4736889612498 2 573.7449218630791 MULTI CID FTMS 0 0 0 3538 99987.9375 0.9061315050302384 -3 0.0119457244873046 1 Unmodified _DSDRYRDGY_ ENSG00000063046|ENST00000262056|EIF4B;nc|ENSG00000063046|P23588-2|EIF4B 66.45667989310934 0.0225072657982126 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[QA][YG]DGY 10 6 + 38.492 0.0 0.0 3.3603 3.3603 82.818 0.0 0.0 0.0 0.7698776497074817 3.99674684468792 0.7698776497074817 38.49153133413289 0 0.6747425010840047 0.0 0.0 1.110924374808178 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[QA][YG]DGY 3.3603 - 173 1 2.297 94356.7 0.5199999809265137 612 2925 3538 DOHH2_400M_050219_2,3539 DOHH2_400M_050219_2,3539,DSDRYRDGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3541 16.894 210.0 395180.0 25 0 203040.0 -1 0 61 472.2727956116005 471.2655191450005 1 472.2726318240166 MULTI CID FTMS 0 0 0 3540 282994.28125 0.7489083505712816 -1 0.0163860321044921 1 2 D 1 -1 1.1092 0.0 0.0 0.23538 0.0 0.0 287.18084614870986 66.03561578922108 353.21646193793094 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.23538 - 3 + 1 2.297 73140.0 1.0 613 2926 3540 DOHH2_400M_050219_2,3541 DOHH2_400M_050219_2,3541, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3542 16.899 239.0 317910.0 25 0 28875.0 + 16561 KDAEWAQKY 9 105 380.1877940685536 1137.5415528058606 3 380.1875488162041 MULTI CID FTMS 0 0 0 3540 177429.75 0.1922228219150089 -6 0.0364284515380859 2 Unmodified _KDAEWAQKY_ REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-1|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-4|NEB 7.289230182591677 0.6602208344931196 2 KY 2 -1 17.307 0.0 0.0 1.5215 0.0 0.0 828.3726512939451 0.0 828.3726512939451 0.0 3.534335689638173 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 KY 1.5215 + + 160 + 1 2.297 64726.5 1.0 614 2926 3540 DOHH2_400M_050219_2,3542 DOHH2_400M_050219_2,3542,KDAEWAQKY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3543 16.903 239.0 238650.0 25 0 26061.0 + 30479 REDDSVHAY 9 63 546.2411732570637 1090.4677935809273 2 546.2418090701103 MULTI CID FTMS 0 0 0 3540 103458.546875 0.4723722380674118 -3 0.0244731903076171 3 Unmodified _REDDSVHAY_ ENSG00000167136|ENST00000372642|ENDOG 36.506200033944 0.094635877243972 2 SVHAY 5 4 51.348 0.0 0.0 4.7088 0.0 0.0 515.196092674025 0.0 515.196092674025 0.0 38.16011607352703 0.0 0.0 0 1.3807196863200843 0.0 0.3807196863200844 0.0 + SVHAY 4.7088 + + 49 1 2.297 49230.5 1.0 615 2926 3540 DOHH2_400M_050219_2,3543 DOHH2_400M_050219_2,3543,REDDSVHAY True True REDDSVHAY 16.902995 546.24180907011 898750.0625 3540.0 ENSG00000167136|ENST00000372642|ENDOG 7.8453192710876465 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3544 16.914 644.0 117260.0 25 0 10993.0 + 4098 DANSRTSQL 9 121 496.243745727444 990.472938521688 2 496.2435485720634 MULTI CID FTMS 0 0 0 3540 107329.7734375 0.1865608277274508 -7 0.0404529571533203 4 Unmodified _DANSRTSQL_ ENSG00000095015|ENST00000399503|MAP3K1 59.36838082759317 0.0264317782606298 2 {[DA]|[EG]}NSR{[MG]|[TS]}Q{I|L} 9 0 + 53.268 0.0 0.0 5.3781 5.3781 86.553 0.0 0.0 0.0 4.328327041010169 24.456208347128623 4.328327041010169 11.082268588648247 0 1.774227503252014 2.0 0.5402877273156862 0.0 + + {[DA]|[EG]}NSR{[MG]|[TS]}Q{I|L};{[DA]|[EG]}NSR[C(Carbamidomethyl (C))R]{I|L};{[SA]|[TG]}[DN]R{[MG]|[TS]}Q{I|L};{[SA]|[TG]}G[DG]R{[MG]|[TS]}Q{I|L};{[SA]|[TG]}G{[MG]|[TS]}{[NV]|[RG]}DQ{I|L};{[SA]|[TG]}[DN]R[C(Carbamidomethyl (C))R]{I|L};{[DA]|[EG]}[YK][VP]N{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}[WD]{[MG]|[TS]}Q{I|L};[NS]{[DA]|[EG]}R{[MG]|[TS]}Q{I|L};{[SA]|[TG]}G[DG]R[C(Carbamidomethyl (C))R]{I|L} 5.3781;4.2592;3.1283;2.6306;2.0458;2.0094;1.9403;1.7446;1.6857;1.5063 +;-;-;-;-;-;-;-;-;- + 286 1 2.297 62379.2 1.0 616 2926 3540 DOHH2_400M_050219_2,3544 DOHH2_400M_050219_2,3544,DANSRTSQL True True DANSRTSQL 16.914208 496.243548572063 5942582.5 3540.0 ENSG00000095015|ENST00000399503|MAP3K1 6.023038705190023 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3547 16.924 182.0 313350.0 25 0 33033.0 + 26423 NTDRNIDKY 9 83 569.7777914043177 1137.5410298754352 2 569.7778808474541 MULTI CID FTMS 0 0 0 3546 308718.28125 0.4698370705863855 -5 0.0552043914794921 1 Unmodified _NTDRNIDKY_ ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR 42.312485326615175 0.0627620958981271 2 {[QS]|[NT]}[RD]N{I|L}DKY 9 0 + 58.672 0.0 0.0 5.1578 5.1578 84.182 0.0 0.0 0.0 9.704999916446797 16.478174818886373 9.704999916446797 9.208187539523747 0 1.424742501084005 1.5228787452803376 0.0 0.7134679910804405 + + {[QS]|[NT]}[RD]N{I|L}DKY;{[QS]|[NT]}[RD]GG{I|L}DKY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}DKY;AAT{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}DKY;{[QD]|[EN]|[WG]|[KD]|[RS]}[EP]M{I|L}DKY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP]DKY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}GG{I|L}DKY;AAT{[QD]|[EN]|[WG]|[KD]|[RS]}GG{I|L}DKY;[HS][YV]N{I|L}DKY;AAT{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP]DKY 5.1578;4.3483;4.3047;4.04;3.8264;3.7149;3.4952;3.2344;3.1222;3.0768 +;-;-;-;-;-;-;-;-;- + 240 1 2.297 45567.5 1.0 617 2928 3546 DOHH2_400M_050219_2,3547 DOHH2_400M_050219_2,3547,NTDRNIDKY True True NTDRNIDKY 16.924326 569.777880847454 2633059.75 3546.0 ENSG00000163946|ENST00000683822|TASOR;;nc|ENSG00000163946|Q9UK61-4|TASOR;;nc|ENSG00000163946|Q9UK61-3|TASOR 6.296279748280843 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3548 16.932 408.0 244090.0 25 0 25871.0 22784 LQRTQSQLL 9 122 362.8795747494703 1085.6168948486109 3 362.8802978396416 MULTI CID FTMS 0 0 0 3546 121466.609375 0.8611799725046776 9 -0.1686725616455078 2 Unmodified _LQRTQSQLL_ ENSG00000152672|ENST00000272367|CLEC4F;nc|ENSG00000152672|Q8N1N0-2|CLEC4F 24.99096001346401 0.2132109383330889 2 {I|L}AQ 3 7 38.755 0.0 0.0 3.5699 0.0 0.0 0.0 770.4184054010374 770.4184054010374 25.65607942518323 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.7742275032520141 {I|L}AQ 3.5699 - 78 + 1 2.297 83580.3 1.0 618 2928 3546 DOHH2_400M_050219_2,3548 DOHH2_400M_050219_2,3548,LQRTQSQLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3549 16.945 800.0 83422.0 25 0 2654.9 -1 0 97 733.0683301915369 2928.2442148997475 4 733.3192626833916 MULTI CID FTMS 0 0 0 3546 133364.1875 0.6942387018050206 -5 0.0552043914794921 3 2 HW 2 -1 16.454 0.0 0.0 0.56189 0.0 0.0 2587.090264817356 0.0 2587.090264817356 0.0 4.569400253826782 0.0 0.0 0 0.0 0.0 0.0 0.0 HW 0.56189 - 186 1 2.297 52532.7 0.5600000023841858 619 2928 3546 DOHH2_400M_050219_2,3549 DOHH2_400M_050219_2,3549, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3551 16.956 478.0 133920.0 25 0 11452.0 + 18062 KTDLHNEGY 9 105 538.7539106548572 1075.4932683765144 2 538.7536498904228 MULTI CID FTMS 0 0 0 3550 129763.703125 0.0238278842788561 36 -0.5991096496582031 1 Unmodified _KTDLHNEGY_ ENSG00000131378|ENST00000334133|RFTN1 27.22323531849824 0.1848086127304535 2 KTD{I|L} 4 5 28.906 0.0 0.0 2.6877 0.0 0.0 0.0 615.2170504205686 615.2170504205686 2.919766801346224 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 + KTD{I|L} 2.6877 + + 291 + 1 2.297 55917.3 1.0 620 2929 3550 DOHH2_400M_050219_2,3551 DOHH2_400M_050219_2,3551,KTDLHNEGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3552 16.963 360.0 285310.0 25 0 50721.0 + 45411 YTDATSKY 8 105 474.7192020093125 947.4238510854252 2 474.7192565798759 MULTI CID FTMS 0 0 0 3550 145963.125 0.41027982496161 -4 0.0742950439453125 2 Unmodified _YTDATSKY_ ENSG00000102580|ENST00000602402|DNAJC3 45.69961567697781 0.159474709770503 2 YTDATSKY 8 0 + 79.105 0.0 0.0 8.3495 8.3495 95.37 0.0 0.0 0.0 65.84244409179611 12.914930551903224 12.914930551903224 14.368580747024067 0 0.6989700043360187 2.0 0.0 0.0 + + YTDATSKY;YTD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KY;YTDA[RH]W;YTY{[{M(Oxidation (M))|F}H]|[RQ]}{[MS]|[{M(Oxidation (M))|F}A]};{[DA]|[EG]}[{I|L}P]TAD[{M(Oxidation (M))|F}V];{[DA]|[EG]}T[{I|L}P]AD[{M(Oxidation (M))|F}V];{[ES]|[DT]|[{I|L}C]}A[{I|L}P]AD[{M(Oxidation (M))|F}V];{[SA]|[TG]}E[{I|L}P]AD[{M(Oxidation (M))|F}V] 8.3495;6.8329;5.7421;2.4222;1.7697;0.94839;0.7155;0.18712 +;-;-;-;-;-;-;- + 225 + 1 2.297 82576.0 1.0 621 2929 3550 DOHH2_400M_050219_2,3552 DOHH2_400M_050219_2,3552,YTDATSKY False True YTDATSKY 16.962912 474.719256579876 1556853.625 3550.0 ENSG00000102580|ENST00000602402|DNAJC3 8.670632044474283 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3553 16.968 250.0 311000.0 25 0 96030.0 -1 0 75 437.2312650702403 436.2239886036403 1 437.2311889529228 MULTI CID FTMS 0 0 0 3550 172371.5 0.6766535612468858 -15 0.1397228240966797 3 2 Y 1 -1 12.218 0.0 0.0 2.801 0.0 0.0 255.1499967596934 0.0 255.1499967596934 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.801 - 8 + 1 2.297 66112.4 1.0 622 2929 3550 DOHH2_400M_050219_2,3553 DOHH2_400M_050219_2,3553, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3556 16.988 800.0 55779.0 25 0 2412.9 + 8804 EWWLHYYSEDY 11 87 795.8303599155461 1589.646166897892 2 795.8306152224541 MULTI CID FTMS 0 0 0 3555 45640.265625 0.4179948709722242 -4 0.0573348999023437 1 Unmodified _EWWLHYYSEDY_ REV__ENST00000547733.1_1_12:39687284-39687350:-|nuORF 5.731851221503515 0.8481046878870278 2 [NS]GYS[HT]PYGSGGGSY 16 -1 + 78.392 0.0 0.0 4.9314 4.9314 71.908 0.0 0.0 0.0 0.2632893872234945 8.899699876253777 0.2632893872234945 0.2632893872234945 0 2.079689690656103 0.0 1.3807196863200843 0.0 [NS]GYS[HT]PYGSGGGSY;[SG]GGYS[HT]PYGSGGGSY;[NS]GYS{[WT]|[RM]}[PG]GGSGGGSY;[SG]GGYS{[WT]|[RM]}[PG]GGSGGGSY;[SG]NYS[HT]PYGSGGGSY;[NS]GYS[HT]PYSGGGGSY;[SG]NYS{[WT]|[RM]}[PG]GGSGGGSY;[SG]GGYS[HT]PYSGGGGSY;[NS]GYSG[PA]{[ES]|[DT]|[{I|L}C]}GGSGGGSY;[SG]GGYSG[PA]{[ES]|[DT]|[{I|L}C]}GGSGGGSY 4.9314;4.9148;4.896;4.8804;4.7766;4.742;4.7412;4.7255;4.7215;4.7067 -;-;-;-;-;-;-;-;-;- 10005 1 2.296 36547.3 0.4600000083446502 623 2931 3555 DOHH2_400M_050219_2,3556 DOHH2_400M_050219_2,3556,EWWLHYYSEDY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3557 17.002 800.0 110830.0 25 0 8969.8 + 6883 EEEKPQTTY 9 132 562.7587726940347 1123.5029924548694 2 562.7587768435478 MULTI CID FTMS 0 0 0 3555 92664.140625 0.6202884189671602 -4 0.0573348999023437 2 Unmodified _EEEKPQTTY_ ENSG00000170464|ENST00000302060|DNAJC18 56.17704186161178 0.0281986971544335 2 {[WN]|[YH]}TN[DG][RV]Y 9 8 + 28.317 0.0 0.0 2.5204 2.5204 74.349 0.0 0.0 0.0 0.7367600398743299 1.2279048511777972 0.7367600398743299 8.8843215074568 0 0.0 0.0 0.7396518287104438 0.3807196863200844 {[WN]|[YH]}TN[DG][RV]Y;{[WN]|[YH]}PD{[ET]|[MV]}VTY;EEEKWW{[MS]|[{M(Oxidation (M))|F}A]};EEEK[DG][YV][VG];[QP]TA[NP]KE[HC];EEEK[DG]{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]};[DP]K[HM]N[PS][QA];[DP]KG[NP]KE[HC];[QP]TTY[C(Carbamidomethyl (C))R][QA];{[HG]|PP}NK[DG]KE[HC] 2.5204;1.7296;1.5579;1.4348;1.4199;1.3149;1.1319;1.0548;0.99524;0.96239 -;-;-;-;-;-;-;-;-;- 1461 + 1 2.296 70118.2 0.5600000023841858 624 2931 3555 DOHH2_400M_050219_2,3557 DOHH2_400M_050219_2,3557,EEEKPQTTY True True EEEKPQTTY 17.001782 562.758776843548 663328.5 3555.0 ENSG00000170464|ENST00000302060|DNAJC18 6.873698870340983 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3559 17.009 226.0 367410.0 25 0 152190.0 -1 0 69 502.2860864342268 501.2788099676269 1 502.2823058962822 MULTI CID FTMS 0 0 0 3558 214445.890625 0.3443496747673824 -58 0.5909214019775391 1 2 {[WT]|[RM]}[VP] 4 -1 + 4.437 0.0 0.0 0.88513 0.88513 69.084 0.0 0.0 0.0 0.94212497064703 0.94212497064703 0.94212497064703 4.436974992327124 0 0.0 0.0 0.0 0.0 {[WT]|[RM]}[VP] 0.88513 - 7 + 1 2.296 71830.1 1.0 625 2932 3558 DOHH2_400M_050219_2,3559 DOHH2_400M_050219_2,3559, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3563 17.033 800.0 207040.0 25 0 44615.0 27528 PKTHLLAF 8 100 463.7747436761584 925.5349344191168 2 463.7744933962822 MULTI CID FTMS 0 0 0 3562 153028.375 0.7409674641534935 1 -0.0440521240234375 1 Unmodified _PKTHLLAF_ ENSG00000064205|ENST00000190983|CCN5;ENST00000497421.1_1_20:43344031-43348789:+|nuORF;nc|ENSG00000064205|O76076-2|CCN5 24.67388899826682 0.525179942228231 2 KPTH 4 6 45.165 0.0 0.0 4.8799 0.0 0.0 0.0 459.2602022760376 459.2602022760376 33.38228874015249 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 KPTH 4.8799 - 86 + 1 2.296 133267.8 0.7900000214576721 626 2935 3562 DOHH2_400M_050219_2,3563 DOHH2_400M_050219_2,3563,PKTHLLAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3564 17.047 800.0 139290.0 25 0 28672.0 + 27304 PHLRTDCRLV 10 87 605.3280951101373 1208.6416372870744 2 605.3288452029228 MULTI CID FTMS 0 0 0 3562 107494.1328125 0.1972441113971689 33 -0.6095180511474609 2 Unmodified _PHLRTDCRLV_ REV__ENSG00000162746|ENST00000367948|FCRLB;REV__ENST00000495397.1_1_1:161696362-161697449:+|nuORF 13.90604991867851 0.6142120002215601 2 HEPPH[VP] 7 -1 37.963 0.0 0.0 3.141 0.0 0.0 397.2429371564469 0.0 397.2429371564469 0.0 24.468582301981883 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 HEPPH[VP] 3.141 - 172 1 2.296 85186.8 0.5799999833106995 627 2935 3562 DOHH2_400M_050219_2,3564 DOHH2_400M_050219_2,3564,PHLRTDCRLV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3565 17.06 800.0 237740.0 25 0 53952.0 31224 RLRIHVSY 8 123 522.309606736253 0 522.3097411990166 PEAK CID FTMS 0 0 0 3562 92342.3125 0.8579939165687375 -8 0.1022167205810546 3 Unmodified _RLRIHVSY_ ENSG00000133131|ENST00000355610|MORC4 5.760428011301431 0.5786759180849727 2 TK 2 8 9.464 0.0 0.0 0.90772 0.0 0.0 129.1049139211105 681.3296451818653 810.4345591029758 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TK 0.90772 - 17 + 1 2.296 151214.3 0.5699999928474426 628 2935 3562 DOHH2_400M_050219_2,3565 DOHH2_400M_050219_2,3565,RLRIHVSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3567 17.071 464.0 191420.0 25 0 57510.0 + -1 LTGWPLTMK 9 100 531.7855341183447 1061.5565153034893 2 532.2949706912041 MULTI CID FTMS 0 0 0 3566 73009.6640625 0.2878197937137439 -15 0.2053337097167968 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 18.1463463914782 0.3454829746528889 2 HT{M(Oxidation (M))|F}K 4 -1 33.25 0.0 0.0 3.1322 0.0 0.0 530.3067815323236 0.0 530.3067815323236 0.0 22.141237821364967 0.0 0.0 0 0.8807196863200843 0.0 0.3252574989159953 0.1549471895720985 HT{M(Oxidation (M))|F}K 3.1322 - 257 + 1 2.296 73405.2 1.0 629 2936 3566 DOHH2_400M_050219_2,3567 DOHH2_400M_050219_2,3567,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3568 17.081 551.0 210080.0 25 0 24023.0 17693 KPTGPQRI 8 100 448.7693049727962 895.5240570123924 2 448.7689086794853 MULTI CID FTMS 0 0 0 3566 126193.6328125 0.5830230368812007 -7 0.115060806274414 2 Unmodified _KPTGPQRI_ ENST00000471433.5_3_6:7108236-7176922:+|nuORF;ENST00000491191.5_3_6:7108236-7176929:+|nuORF 11.640296217721598 0.738950129755968 2 KP 2 6 30.217 0.0 0.0 3.3742 0.0 0.0 0.0 667.3533096801427 667.3533096801427 17.998037644757048 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + KP 3.3742 + + 39 + 1 2.296 93122.6 1.0 630 2936 3566 DOHH2_400M_050219_2,3568 DOHH2_400M_050219_2,3568,KPTGPQRI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3569 17.087 331.0 354370.0 25 0 57325.0 + 4767 DEITGKKGY 9 98 505.76093737539696 1009.507321817594 2 505.7615539431572 MULTI CID FTMS 0 0 0 3566 220918.6875 0.48961064397524 -7 0.115060806274414 3 Unmodified _DEITGKKGY_ ENSG00000159256|ENST00000400485|MORC3 53.832793166522166 0.0319663582346103 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TKGKGY 9 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} + + 45.487 5.2288 2.1423 4.5059 4.5059 53.544 0.0 0.0 0.0 0.0 19.165863861927114 0.0 0.0 0 1.5356668758921828 0.0 0.4247425010840047 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TKGKGY 4.5059 - 441 + 1 2.296 96682.5 1.0 631 2936 3566 DOHH2_400M_050219_2,3569 DOHH2_400M_050219_2,3569,DEITGKKGY True True DEITGKKGY 17.086929 505.761553943157 2079529.375 3566.0 ENSG00000159256|ENST00000400485|MORC3 6.481027444203694 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3572 17.098 256.0 307480.0 25 0 15622.0 + 30070 QVDHADGLEK 10 99 556.2725395243507 1110.5305261155013 2 556.2723876833916 MULTI CID FTMS 0 0 0 3571 300228.65625 0.3346624991117297 -7 0.1193733215332031 1 Unmodified _QVDHADGLEK_ REV__ENSG00000163492|ENST00000443758|CCDC141;REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141 32.037481411007896 0.2488723560272515 2 [DV]QHVDAAEK 10 -1 + 110.98 0.0 0.0 9.9938 9.9938 85.771 0.0 0.0 0.0 2.641617082476998 2.641617082476998 2.641617082476998 2.641617082476998 0 3.305462187404089 1.5228787452803376 0.7614393726401688 0.7742275032520141 [DV]QHVDAAEK;[DV]HQVDAAEK;[DV]HAGVDAAEK;[DV][AG]HVDAAEK;[DV]AHGVDAAEK;[DV]HAAEAAAEK;[DV]AHAEAAAEK;[DV]QHVD[VS]{[NV]|[RG]};[DV]HQVD[VS]{[NV]|[RG]};[DV]HAGVD[VS]{[NV]|[RG]} 9.9938;9.7559;9.5459;9.1686;8.8452;8.464;7.7633;6.3937;6.1063;5.8963 -;-;-;-;-;-;-;-;-;- 959 + 1 2.296 65889.6 1.0 632 2938 3571 DOHH2_400M_050219_2,3572 DOHH2_400M_050219_2,3572,QVDHADGLEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3573 17.103 286.0 308870.0 25 0 24804.0 + 6982 EEIKKNYRY 9 87 414.8872238131677 1241.6398420397031 3 414.8872558474541 MULTI CID FTMS 0 0 0 3571 200249.625 0.5421313772573938 -5 0.0823116302490234 2 Unmodified _EEIKKNYRY_ ENSG00000106477|ENST00000223208|CEP41;ENST00000482730.1_1_7:130051992-130056799:-|nuORF;ENST00000498527.5_1_7:130050951-130080846:-|nuORF;nc|ENSG00000106477|Q9BYV8-2|CEP41 41.8396318013385 0.0653578398400075 2 {M(Oxidation (M))|F}[HS]KKNYRY 9 3 + 48.299 0.0 0.0 3.8899 3.8899 79.3 0.0 0.0 0.0 31.704868851976546 8.517733521595972 8.517733521595972 9.208187539523747 0 0.5 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}[HS]KKNYRY;{M(Oxidation (M))|F}[HS]KKGGYRY;{M(Oxidation (M))|F}[HS]KKYNRY;{[ET]|[MV]}[RN]NKK{I|L}[HC];[DP]{[DS]|[MA]|[CV]|TT}{[TV]|[{I|L}S]}KK{I|L}[HC];{M(Oxidation (M))|F}[HS]KKYGGRY;{[ET]|[MV]}[RN]GGKK{I|L}[HC] 3.8899;3.1483;3.1214;2.9352;2.3932;2.3798;2.1971 -;-;-;-;-;-;- 131 + 1 2.296 81079.9 1.0 633 2938 3571 DOHH2_400M_050219_2,3573 DOHH2_400M_050219_2,3573,EEIKKNYRY True True EEIKKNYRY 17.103496 414.887255847454 1630036.5 3571.0 ENST00000498527.5_1_7:130050951-130080846:-|nuORF;;ENST00000482730.1_1_7:130051992-130056799:-|nuORF;;nc|ENSG00000106477|Q9BYV8-2|CEP41;;ENSG00000106477|ENST00000223208|CEP41 6.113137880961101 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3576 17.112 82.0 770170.0 25 0 239800.0 + 36595 TAMKKGETL 9 70 489.767744056589 977.520935179978 2 489.7679321169853 MULTI CID FTMS 0 0 0 3575 489363.34375 0.5733489700964662 -5 0.0910491943359375 1 Unmodified _TAMKKGETL_ ENSG00000165732|ENST00000354185|DDX21 29.84058131909904 0.1515068451768857 2 TAMKG 5 4 62.206 0.0 0.0 6.3637 0.0 0.0 0.0 486.2532137506469 486.2532137506469 45.62083450479072 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 TAMKG 6.3637 - 94 + 1 2.296 56170.7 1.0 634 2940 3575 DOHH2_400M_050219_2,3576 DOHH2_400M_050219_2,3576,TAMKKGETL False True TAMKKGETL 17.112277 489.767932116985 3762670.25 3575.0 ENSG00000165732|ENST00000354185|DDX21 6.770194848378499 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3577 17.126 800.0 122560.0 25 0 18832.0 + 38040 TPDPPLAPSR 10 111 525.7838086882215 1049.5530644432429 2 525.7839843630791 MULTI CID FTMS 0 0 0 3575 78915.8046875 0.4561917048556766 -6 0.0950450897216796 2 Unmodified _TPDPPLAPSR_ REV__ENSG00000187902|ENST00000376325|SHISA7;REV__ENST00000416792.1_3_19:55944525-55949973:-|nuORF 20.41453444215458 0.5050059513928961 2 TP{I|L}[WP]K 6 -1 39.372 0.0 0.0 3.7513 0.0 0.0 309.136274570204 0.0 309.136274570204 0.0 24.6669877129645 0.0 0.0 0 1.8494850021680087 0.0 0.3252574989159953 0.0 TP{I|L}[WP]K 3.7513 - 119 1 2.296 79313.6 0.5799999833106995 635 2940 3575 DOHH2_400M_050219_2,3577 DOHH2_400M_050219_2,3577,TPDPPLAPSR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3580 17.142 487.0 133180.0 25 0 8170.8 + 7112 EEMKKGSQF 9 100 542.2599241683653 1082.5052954035305 2 542.2603027224541 MULTI CID FTMS 0 0 0 3579 135243.15625 0.3450881063767184 -9 0.1213283538818359 1 Unmodified _EEMKKGSQF_ ENSG00000136628|ENST00000366923|EPRS1 27.628801355627647 0.1796483985696185 2 EEMK 4 5 41.682 0.0 0.0 3.8506 0.0 0.0 0.0 562.2627047174436 562.2627047174436 16.48780322035236 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + EEMK 3.8506 + + 96 + 1 2.296 55369.7 1.0 636 2942 3579 DOHH2_400M_050219_2,3580 DOHH2_400M_050219_2,3580,EEMKKGSQF False True EEMKKGSQF 17.141939 542.260302722454 1700157.375 3579.0 ENSG00000136628|ENST00000366923|EPRS1 6.384044329325358 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3583 17.154 315.0 281610.0 25 0 37273.0 + 16562 KDAEWAQKY 9 110 380.1877940685536 1137.5415528058606 3 380.1831542849541 MULTI CID FTMS 0 0 0 3582 189557.15625 0.205361341536914 12 -0.1535186767578125 1 Unmodified _KDAEWAQKY_ REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-1|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-4|NEB 7.289230182591677 0.6602208344931196 2 DKY 3 -1 20.15 0.0 0.0 1.7714 0.0 0.0 713.3448477251549 0.0 713.3448477251549 0.0 10.546218740408904 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 DKY 1.7714 - 137 + 1 2.296 76084.3 1.0 637 2944 3582 DOHH2_400M_050219_2,3583 DOHH2_400M_050219_2,3583,KDAEWAQKY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3584 17.16 319.0 229520.0 25 0 17787.0 + 374 AEDKENYKKF 10 89 424.5470468249914 1270.6193110751742 3 424.5467712283134 MULTI CID FTMS 0 0 0 3582 107457.71875 0.0339294966812578 -13 0.1742191314697265 2 Unmodified _AEDKENYKKF_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 49.55428908609986 0.0827668555218455 2 AEDK[YR]VVYE 10 6 + 65.093 0.0 0.0 5.1229 5.1229 89.533 0.0 0.0 0.0 50.6683118406949 5.20565248900337 5.20565248900337 57.18817466656557 0 0.3494850021680094 1.6989700043360187 1.4517188504113845 0.0 AEDK[YR]VVYE;[WE]K[YR][HQ]A[PG];[WE]K[YR][HQ][QP] 5.1229;0.62213;0.34495 -;-;- 179 + 1 2.296 65308.6 1.0 638 2944 3582 DOHH2_400M_050219_2,3584 DOHH2_400M_050219_2,3584,AEDKENYKKF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3585 17.162 120.0 496240.0 25 0 84146.0 + 8555 ETKESCWKGLD 11 57 432.53745002703386 1294.5905206813015 3 432.5368835330009 MULTI CID FTMS 0 0 0 3582 138920.953125 0.4065197680750697 -7 0.0588512420654296 3 Unmodified _ETKESCWKGLD_ REV__ENSG00000090863|ENST00000422840|GLG1;REV__ENST00000567911.1_1_16:74508380-74511380:-|nuORF;REV__nc|ENSG00000090863|Q92896-2|GLG1;REV__nc|ENSG00000090863|Q92896-3|GLG1 11.494710602746466 0.7960433852372589 2 TE{M(Oxidation (M))|F} 3 -1 47.096 0.0 0.0 3.6379 0.0 0.0 0.0 914.4081501434124 914.4081501434124 44.877203139966326 0.0 0.0 0.0 0 0.566901560044258 1.5228787452803376 0.0 0.0 TE{M(Oxidation (M))|F} 3.6379 - 26 + 1 2.296 54295.2 1.0 639 2944 3582 DOHH2_400M_050219_2,3585 DOHH2_400M_050219_2,3585,ETKESCWKGLD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3586 17.176 800.0 109420.0 25 0 29974.0 + 29123 QESGPSAEKY 10 104 548.251523228638 1094.488493524076 2 548.2520019412041 MULTI CID FTMS 0 0 0 3582 91513.6640625 0.468068111962821 12 -0.1535186767578125 4 Unmodified _QESGPSAEKY_ ENSG00000165775|ENST00000369498|FUNDC2;ENST00000484175.5_1_X:154255538-154282944:+|nuORF 28.49450938151212 0.328477364964909 2 KY 2 8 16.454 0.0 0.0 1.5033 0.0 0.0 785.3191037309103 0.0 785.3191037309103 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 + KY 1.5033 + + 114 + 1 2.296 72032.2 0.5899999737739563 640 2944 3582 DOHH2_400M_050219_2,3586 DOHH2_400M_050219_2,3586,QESGPSAEKY False True QESGPSAEKY 17.176177 548.252001941204 1089016.875 3582.0 ENST00000484175.5_1_X:154255538-154282944:+|nuORF;;ENSG00000165775|ENST00000369498|FUNDC2 5.165374755859375 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3588 17.182 193.0 164820.0 25 0 15534.0 + 4099 DANSRTSQL 9 64 496.243745727444 990.472938521688 2 496.2439147830009 MULTI CID FTMS 0 0 0 3587 184869.59375 0.3213406991091932 12 -0.1701946258544922 1 Unmodified _DANSRTSQL_ ENSG00000095015|ENST00000399503|MAP3K1 21.53697664764585 0.2571576504437394 2 {[DA]|[EG]}N 3 6 38.512 0.0 0.0 3.8883 0.0 0.0 0.0 687.3455904596311 687.3455904596311 17.300821617046935 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + {[DA]|[EG]}N 3.8883 + + 23 + 1 2.296 28172.9 1.0 641 2945 3587 DOHH2_400M_050219_2,3588 DOHH2_400M_050219_2,3588,DANSRTSQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3589 17.194 662.0 94209.0 25 0 17617.0 + 26424 NTDRNIDKY 9 85 569.7777914043177 1137.5410298754352 2 569.7769653201103 MULTI CID FTMS 0 0 0 3587 40085.14453125 0.0610054150481066 12 -0.1701946258544922 2 Unmodified _NTDRNIDKY_ ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR 24.020572477871973 0.2255576514309169 2 E{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KY 6 6 23.65 0.0 0.0 2.0791 0.0 0.0 292.13595282641023 0.0 292.13595282641023 0.0 10.674348243169138 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.5 E{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KY 2.0791 - 133 + 1 2.296 55407.6 1.0 642 2945 3587 DOHH2_400M_050219_2,3589 DOHH2_400M_050219_2,3589,NTDRNIDKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3590 17.198 220.0 265940.0 25 0 46930.0 + 2869 AVDPQHNGY 9 76 500.7277107199521 999.4408685067042 2 500.7279540896416 MULTI CID FTMS 0 0 0 3587 183395.90625 0.2269902840822372 -12 0.1675643920898437 3 Unmodified _AVDPQHNGY_ ENSG00000170145|ENST00000304987|SIK2 34.10243960390752 0.1078313939113124 2 {[VA]|[{I|L}G]}D{[QS]|[NT]}HH 7 4 42.051 0.0 0.0 4.2074 0.0 0.0 0.0 222.08815942935783 222.08815942935783 28.556066401185163 0.0 0.0 0.0 0 1.274227503252014 2.0 0.0 0.3807196863200844 {[VA]|[{I|L}G]}D{[QS]|[NT]}HH 4.2074 - 212 + 1 2.296 52344.6 1.0 643 2945 3587 DOHH2_400M_050219_2,3590 DOHH2_400M_050219_2,3590,AVDPQHNGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3591 17.202 197.0 374910.0 25 0 106990.0 18041 KSTNPYGWPQI 11 46 430.8881131772836 0 430.8880798220634 PEAK CID FTMS 0 0 0 3587 296623.9375 0.6196730579656214 159 -3.362497329711914 4 Unmodified _KSTNPYGWPQI_ ENSG00000108641|ENST00000261499|B9D1;ENST00000477478.6_2_17:19247025-19261261:-|nuORF;ENST00000477683.5_1_17:19250580-19265912:-|nuORF;ENST00000575403.5_2_17:19241035-19261261:-|nuORF;nc|ENSG00000108641|Q9UPM9-2|B9D1 2.9952420565917617 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.296 66431.5 1.0 644 2945 3587 DOHH2_400M_050219_2,3591 DOHH2_400M_050219_2,3591,KSTNPYGWPQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3594 17.222 800.0 135100.0 25 0 16625.0 + 377 AEDKENYKKF 10 104 636.3169529306037 1270.6193529280074 2 636.3171874880791 MULTI CID FTMS 0 0 0 3593 104256.609375 0.1773825954256269 -10 0.1189594268798828 1 Unmodified _AEDKENYKKF_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 139.3213623244945 0.0001524790619354 2 [TA]AEAENYKK{M(Oxidation (M))|F} 11 4 + 112.87 0.0 0.0 8.883 8.883 85.215 0.0 0.0 0.0 2.7293388572607995 4.23252929640347 2.7293388572607995 2.7293388572607995 0 2.2478499570595205 0.0 2.4520534381044503 1.0189301784845295 [TA]AEAENYKK{M(Oxidation (M))|F};{[CP]|[EA]}DKENYKK{M(Oxidation (M))|F};AEDKENYKK{M(Oxidation (M))|F};AEDKENYK{M(Oxidation (M))|F}K;{[CP]|[EA]}DKEGGYKK{M(Oxidation (M))|F};AEDKEGGYKK{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AKENYKK{M(Oxidation (M))|F};{[CP]|[EA]}[TA]AENYKK{M(Oxidation (M))|F};[TA]AEAEGGYKK{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KAENYKK{M(Oxidation (M))|F} 8.883;8.6682;8.5499;8.2481;7.9469;7.8286;7.7838;7.71;7.6623;7.5469 -;+;+;-;-;-;-;-;-;- + 1850 1 2.296 86692.8 0.5400000214576721 645 2947 3593 DOHH2_400M_050219_2,3594 DOHH2_400M_050219_2,3594,AEDKENYKKF True True AEDKENYKKF 17.222264 636.317187488079 48897185.5 3593.0 ENSG00000096384|ENST00000371646|HSP90AB1;;nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1 9.44806957244873 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3597 17.243 800.0 121920.0 25 0 33020.0 + -1 ETVLCCKGLSE 11 69 648.3024177286752 1294.5902825241503 2 648.3026611208916 MULTI CID FTMS 0 0 0 3596 94053.53125 0.7076557549537688 -3 0.024393081665039 1 2 Carbamidomethyl (C) _ETVLC(Carbamidomethyl (C))C(Carbamidomethyl (C))KGLSE_ REV__ENSG00000204634|ENST00000409318|TBC1D8;REV__nc|ENSG00000204634|O95759-2|TBC1D8;REV__nc|ENSG00000204634|O95759|TBC1D8 15.248480904072842 0.7179608125786238 2 VET[DV]E 6 -1 28.438 0.0 0.0 2.1967 0.0 0.0 604.2711048810562 0.0 604.2711048810562 0.0 15.674100046527355 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 VET[DV]E 2.1967 - 51 1 2.299 73806.6 0.6100000143051147 646 2949 3596 DOHH2_400M_050219_2,3597 DOHH2_400M_050219_2,3597,ETVLCCKGLSE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3598 17.253 565.0 203200.0 25 0 13526.0 8573 ETMYSPRSL 9 154 361.8437502234043 1082.509421270413 3 361.8430053591728 MULTI CID FTMS 0 0 0 3596 85416.4140625 0.8874246789312367 -1 0.0040054321289062 2 Unmodified _ETMYSPRSL_ nc|ENSG00000124232|Q9UBG7-2|RBPJL 12.531546534597751 0.4974689918368763 2 {M(Oxidation (M))|F} 1 8 13.099 0.0 0.0 1.2101 0.0 0.0 917.4302261793958 0.0 917.4302261793958 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.2101 + + 77 + 1 2.299 96089.1 1.0 647 2949 3596 DOHH2_400M_050219_2,3598 DOHH2_400M_050219_2,3598,ETMYSPRSL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 3602 17.266 169.0 400110.0 25 0 73802.0 + -1 IQRLETMK 8 72 517.78633177312 1033.5581106130398 2 517.7872802615166 MULTI CID FTMS 0 0 0 3601 262204.53125 0.324968299251963 -13 0.1570758819580078 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 2 KTT[{I|L}P][WP]K 8 -1 42.669 0.0 0.0 4.1283 0.0 0.0 63.99675206062995 0.0 63.99675206062995 0.0 21.56681865368853 0.0 0.0 0 0.8807196863200843 0.0 1.3494850021680094 0.2742275032520141 KTT[{I|L}P][WP]K 4.1283 - 214 + 1 2.299 54136.1 1.0 648 2952 3601 DOHH2_400M_050219_2,3602 DOHH2_400M_050219_2,3602,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3603 17.28 800.0 149490.0 25 0 65314.0 -1 0 84 508.2936022188833 507.2863257522833 1 508.2939330935478 MULTI CID FTMS 0 0 0 3601 115375.734375 0.3874815601092162 24 -0.5962505340576172 2 2 W 1 -1 15.485 0.0 0.0 3.0524 0.0 0.0 303.1963884737661 0.0 303.1963884737661 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 W 3.0524 - 16 + 1 2.299 98697.9 0.5600000023841858 649 2952 3601 DOHH2_400M_050219_2,3603 DOHH2_400M_050219_2,3603, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3606 17.295 489.0 197360.0 25 0 60369.0 + 2775 ATRPVSKG 8 112 408.24052884836783 0 408.2401306033134 PEAK CID FTMS 0 0 0 3605 99606.546875 0.7372298337340508 4 -0.0837421417236328 1 Unmodified _ATRPVSKG_ REV__ENST00000568299.2_1_16:34480765-34481439:-|nuORF;REV__ENST00000569028.2_1_16:34712954-34714591:-|nuORF 8.593279151180031 0.5573742999696857 2 Y 1 -1 2.7642 0.0 0.0 0.33939 0.0 0.0 424.2842670699794 224.10447107486564 648.3887381448451 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.33939 - 5 + 1 2.299 79865.0 1.0 650 2954 3605 DOHH2_400M_050219_2,3606 DOHH2_400M_050219_2,3606,ATRPVSKG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3609 17.305 155.0 411250.0 25 0 44622.0 18168 KTTANLAALK 10 73 515.8162418996212 1029.6179308660423 2 515.8163940310478 MULTI CID FTMS 0 0 0 3608 379402.9375 0.1082656232555269 -4 0.0387287139892578 1 Unmodified _KTTANLAALK_ ENSG00000047188|ENST00000161863|YTHDC2 33.4449034751529 0.2267874087365337 2 KT{I|L}QTQ{I|L}AK 9 6 + 84.796 0.0 0.0 8.2357 8.2357 90.41 0.0 0.0 0.0 72.4655987781267 16.97982344525242 16.97982344525242 7.95880017344075 0 2.110924374808178 0.0 0.4247425010840047 0.2887254899964357 KT{I|L}QTQ{I|L}AK;KT{I|L}[TA]GQ{I|L}AK;KT{I|L}[AG]TQ{I|L}AK;KT{I|L}QT[AG]{I|L}AK;KT{I|L}[TA]G[AG]{I|L}AK;KT{I|L}[AG]T[AG]{I|L}AK;[KT][KT]G[PS]{I|L}AK;[Q{I|L}]TQ[KT]{I|L}AK;[QT]{I|L}Q[KT]{I|L}AK;[{I|L}A]GTQ[KT]{I|L}AK 8.2357;7.4627;7.3414;7.3414;6.5726;6.4513;3.297;3.2966;3.2966;3.1102 -;-;-;-;-;-;-;-;-;- 583 + 1 2.299 53965.2 1.0 651 2956 3608 DOHH2_400M_050219_2,3609 DOHH2_400M_050219_2,3609,KTTANLAALK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3610 17.319 800.0 169930.0 25 0 16420.0 + 45264 YSDHPSGGSY 10 136 535.2145347949951 1068.41451665679 2 535.2148925662041 MULTI CID FTMS 0 0 0 3608 64026.43359375 0.1003088155217856 -6 0.0467510223388671 2 Unmodified _YSDHPSGGSY_ ENSG00000147274|ENST00000320676|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;nc|ENSG00000147274|P38159-2|RBMX 62.57269311338072 0.0298375429882549 2 S[HD]YYSY 7 5 43.861 0.0 0.0 4.1053 0.0 0.0 135.06868178535314 0.0 135.06868178535314 0.0 31.097025533619025 0.0 0.0 0 0.8494850021680094 0.0 1.1421590589602533 0.0 S[HD]YYSY 4.1053 - 909 1 2.299 105885.5 0.5699999928474426 652 2956 3608 DOHH2_400M_050219_2,3610 DOHH2_400M_050219_2,3610,YSDHPSGGSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3611 17.333 800.0 147290.0 25 0 14836.0 + 43743 YDTCCSQYY 9 133 573.1969597463074 1144.3793665594146 2 573.1979858279228 MULTI CID FTMS 0 0 0 3608 114433.40625 0.2089613382586518 -8 0.0770339965820312 3 Unmodified _YDTCCSQYY_ REV__ENSG00000109072|ENST00000226218|VTN 16.942295170755138 0.3780752226737986 2 [DP]NPAN 6 -1 35.648 0.0 0.0 3.1151 0.0 0.0 0.0 533.1012911091796 533.1012911091796 7.35863111416478 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.4247425010840047 0.25 [DP]NPAN 3.1151 - 527 1 2.299 91568.4 0.6100000143051147 653 2956 3608 DOHH2_400M_050219_2,3611 DOHH2_400M_050219_2,3611,YDTCCSQYY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3612 17.338 293.0 273650.0 25 0 60377.0 -1 0 71 504.2622979850544 503.2550215184544 1 504.2636291384697 MULTI CID FTMS 0 0 0 3608 106359.6640625 0.2745193243011734 -16 0.1918067932128906 4 2 WW{I|L} 3 -1 WW + + 9.8329 1.338 0.35953 1.9539 1.9539 47.429 0.0 0.0 0.0 0.0 -2.8431811792050627 -2.8431811792050627 0.0 0 0.0 0.0 0.0 0.0 WW{I|L} 1.9539 - 3 + 1 2.299 65470.3 1.0 654 2956 3608 DOHH2_400M_050219_2,3612 DOHH2_400M_050219_2,3612, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3613 17.346 477.0 278290.0 25 0 22123.0 -1 0 51 575.2899227974052 2871.413231654026 5 575.6923095583916 MULTI CID FTMS 0 0 0 3608 80456.7890625 0.1244667920124819 -11 0.1231117248535156 5 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.299 104811.7 1.0 655 2956 3608 DOHH2_400M_050219_2,3613 DOHH2_400M_050219_2,3613, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3615 17.352 137.0 451640.0 25 0 69543.0 + -1 LTGWPLTMK 9 74 531.7855341183447 1061.5565153034893 2 531.7844116091728 MULTI CID FTMS 0 0 0 3614 354048.59375 0.8641782592889845 3 -0.0813007354736328 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 24.020572477871973 0.2255576514309169 2 [KT]T{[TV]|[{I|L}S]}HTTK 9 -1 43.724 0.0 0.0 4.1189 0.0 0.0 0.0 60.97754821159746 60.97754821159746 25.497352867626624 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.610924374808178 0.3807196863200844 [KT]T{[TV]|[{I|L}S]}HTTK 4.1189 - 271 1 2.299 55166.5 1.0 656 2957 3614 DOHH2_400M_050219_2,3615 DOHH2_400M_050219_2,3615,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3616 17.354 83.0 770980.0 25 0 118340.0 + + -1 ELPKKTEV 8 70 472.27466415910754 942.5347753850152 2 472.2759887576103 MULTI CID FTMS 0 0 0 3614 636368.6875 0.8947325547389836 -2 0.05108642578125 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SLVEKQVV_ ENSG00000131778|ENST00000369258|CHD1L;nc|ENSG00000131778|Q86WJ1-2|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L 30.22481116460888 0.4082965392918993 2 {[QN]|[E{I|L}]|[KN]}V{I|L}EV{[QN]|[E{I|L}]|[KN]} 8 -1 + 40.965 0.0 0.0 4.3462 4.3462 83.643 0.0 0.0 0.0 4.924639645692835 28.49062674240578 4.924639645692835 15.19974725570174 0 1.0 2.0 0.3252574989159953 0.0 {[QN]|[E{I|L}]|[KN]}V{I|L}EV{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}[KT][K{I|L}][DP];[KP]KTEV{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}EV{[QN]|[E{I|L}]|[KN]} 4.3462;2.7336;1.7149;1.2872 -;-;-;- 91 1 2.299 56516.4 1.0 657 2957 3614 DOHH2_400M_050219_2,3616 DOHH2_400M_050219_2,3616,SLVEKQVV False False ELPKKTEV 17.353573 472.27598875761 3978217.5 3614.0 ENSG00000131778|ENST00000369258|CHD1L;;nc|ENSG00000131778|Q86WJ1-2|CHD1L;;nc|ENSG00000131778|Q86WJ1-3|CHD1L;;nc|ENSG00000131778|Q86WJ1-4|CHD1L 4.249198357264201 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3617 17.357 193.0 564650.0 25 0 186780.0 23144 LSPVAIEQTSL 11 73 579.3227301614392 1156.6309073896782 2 579.3229858279228 MULTI CID FTMS 0 0 0 3614 459878.3125 0.209061444187645 -5 0.0858116149902343 3 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 30.7034409873982 0.3712764582118616 2 TS{I|L} 3 8 34.737 0.0 0.0 3.0033 0.0 0.0 837.4500599591812 0.0 837.4500599591812 0.0 12.544321917401078 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + TS{I|L} 3.0033 + + 76 1 2.299 88088.7 1.0 658 2957 3614 DOHH2_400M_050219_2,3617 DOHH2_400M_050219_2,3617,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3618 17.361 188.0 436580.0 25 0 112620.0 + 28446 PTDMEHTGHY 10 96 396.4976483160677 1186.471115548403 3 396.4975158572197 MULTI CID FTMS 0 0 0 3614 282545.15625 0.9424359556071032 -1 0.0470829010009765 4 Unmodified _PTDMEHTGHY_ ENSG00000126860|ENST00000462804|EVI2A;nc|ENSG00000126860|P22794-2|EVI2A 41.8396318013385 0.1381409678234242 2 PTDMEHTGHY 10 0 + 69.162 0.0 0.0 5.8292 5.8292 91.148 0.0 0.0 0.0 58.78316863271888 15.026975159433531 15.026975159433531 24.904852162776443 0 0.5796896906561032 1.3010299956639813 0.0 0.0 + + PTDMEHTGHY;PTDM[Y{M(Oxidation (M))|F}]NHY;PTDM[Y{M(Oxidation (M))|F}]GGHY;{[ES]|[DT]|[{I|L}C]}P[DG]KE{[YC]|[HE]}C(Carbamidomethyl (C));{[HG]|PP}T[CS]KE{[YC]|[HE]}C(Carbamidomethyl (C)) 5.8292;3.7301;3.6248;1.4483;0.23294 +;-;-;-;- + 296 + 1 2.299 72542.6 1.0 659 2957 3614 DOHH2_400M_050219_2,3618 DOHH2_400M_050219_2,3618,PTDMEHTGHY False True PTDMEHTGHY 17.360907 396.49751585722 1698170.5625 3614.0 ENSG00000126860|ENST00000462804|EVI2A;;nc|ENSG00000126860|P22794-2|EVI2A 9.246878623962402 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3619 17.364 157.0 279650.0 25 0 45138.0 + 26503 NVDSNEQGSY 10 79 556.7288400261098 1111.4431271190194 2 556.7283203005791 MULTI CID FTMS 0 0 0 3614 209047.5625 1.0 0 0.0 5 Unmodified _NVDSNEQGSY_ ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 9.38312468134398 0.6832340498775793 2 WDV[NP]SY 7 6 20.934 0.0 0.0 1.8835 0.0 0.0 232.03090144282788 0.0 232.03090144282788 0.0 6.035605054892184 0.0 0.0 0 0.0 0.0 0.0 0.0 WDV[NP]SY 1.8835 - 92 + 1 2.299 42629.9 1.0 660 2957 3614 DOHH2_400M_050219_2,3619 DOHH2_400M_050219_2,3619,NVDSNEQGSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3620 17.368 200.0 401750.0 25 0 25642.0 + 24580 MLHEKTSKL 9 101 362.870516545026 1085.589720235278 3 362.8707153201103 MULTI CID FTMS 0 0 0 3614 185874.859375 0.4511886417497273 -4 0.0661392211914062 6 Unmodified _MLHEKTSKL_ ENSG00000104164|ENST00000220531|BLOC1S6;ENST00000564310.1_2_15:45895313-45908032:+|nuORF;ENST00000566184.1_1_15:45879720-45897718:+|nuORF 32.89776655970281 0.1144444835665315 2 M{I|L}HEKTSK{I|L} 9 0 + 68.975 0.0 0.0 6.3537 6.3537 82.662 0.0 0.0 0.0 36.47817481888637 4.393326938302636 4.393326938302636 4.393326938302636 0 0.2742275032520141 2.0 0.7742275032520141 0.0 + + M{I|L}HEKTSK{I|L};M{I|L}HEKTS{I|L}K;M{I|L}H{I|L}[SG]TSK{I|L};M{I|L}{I|L}H[SG]TSK{I|L};M{I|L}H{I|L}[SG]TS{I|L}K;M{I|L}HEKT[K{I|L}]S;M{I|L}{I|L}H[SG]TS{I|L}K;M{I|L}H{I|L}[SG]T[K{I|L}]S;M{I|L}{I|L}H[SG]T[K{I|L}]S;M{I|L}H{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{[MS]|[{M(Oxidation (M))|F}A]}K 6.3537;5.949;5.851;5.5748;5.4463;5.3691;5.1701;4.8664;4.5902;4.4146 +;-;-;-;-;-;-;-;-;- + 267 + 1 2.299 67901.0 1.0 661 2957 3614 DOHH2_400M_050219_2,3620 DOHH2_400M_050219_2,3620,MLHEKTSKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3622 17.38 523.0 224880.0 25 0 19764.0 + 5308 DLDKSTGRY 9 93 527.7612517320911 1053.507950530982 2 527.7615234255791 MULTI CID FTMS 0 0 0 3621 155559.875 0.532743574033396 -3 0.0725288391113281 1 Unmodified _DLDKSTGRY_ ENSG00000100592|ENST00000360909|DAAM1;nc|ENSG00000100592|Q9Y4D1-3|DAAM1;nc|ENSG00000100592|Q9Y4D1|DAAM1 57.24910588100465 0.0276051374632116 2 D{I|L}DKST{[NV]|[RG]}Y 9 0 + 94.26 0.0 0.0 8.9472 8.9472 89.685 0.0 0.0 0.0 66.45526631565548 3.4678748622465605 3.4678748622465605 6.478174818886373 0 1.4896518287104437 2.0 0.6694451763165201 0.805462187404089 + + D{I|L}DKST{[NV]|[RG]}Y;D{I|L}DKS[WK]Y;[QP]PPY[EP]{[QV]|[N{I|L}]|[RA]|[KV]};[{M(Oxidation (M))|F}V][QP]ST{[NV]|[RG]}Y;[QP]PPHHD{[QV]|[N{I|L}]|[RA]|[KV]};{[VA]|[{I|L}G]}[HS]TS[EP]{[QV]|[N{I|L}]|[RA]|[KV]};[{M(Oxidation (M))|F}V]N[TP]T{[NV]|[RG]}Y;[{M(Oxidation (M))|F}V]N[W{I|L}]{[NV]|[RG]}Y 8.9472;8.3323;2.1764;1.8898;1.4147;1.0157;0.8541;0.011707 +;-;-;-;-;-;-;- + 268 + 1 2.299 94127.3 1.0 662 2958 3621 DOHH2_400M_050219_2,3622 DOHH2_400M_050219_2,3622,DLDKSTGRY True True DLDKSTGRY 17.379569 527.761523425579 3216415.5 3621.0 nc|ENSG00000100592|Q9Y4D1-3|DAAM1;;nc|ENSG00000100592|Q9Y4D1|DAAM1;;ENSG00000100592|ENST00000360909|DAAM1 6.896815935770671 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3623 17.381 60.0 1062200.0 25 0 88627.0 23146 LSPVAIEQTSL 11 92 386.55096273173024 1156.6310587953908 3 386.5508605837822 MULTI CID FTMS 0 0 0 3621 608289.0 0.3262539338532725 -6 0.1072540283203125 2 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 29.84058131909904 0.3915366693542702 2 QTS{I|L} 4 7 41.643 0.0 0.0 3.6004 0.0 0.0 709.3988588518334 0.0 709.3988588518334 0.0 34.195925227640984 0.0 0.0 0 0.9247425010840048 0.0 1.0 0.0 + QTS{I|L} 3.6004 + + 95 1 2.299 55983.3 1.0 663 2958 3621 DOHH2_400M_050219_2,3623 DOHH2_400M_050219_2,3623,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3624 17.383 110.0 734320.0 25 0 128420.0 + 16615 KEFLDKKKY 9 85 400.23260334647296 1197.675980639619 3 400.2325012087822 MULTI CID FTMS 0 0 0 3621 296218.90625 1.0 0 0.0 3 Unmodified _KEFLDKKKY_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 18.1463463914782 0.3454829746528889 2 DKKKY 5 4 23.188 0.0 0.0 1.936 0.0 0.0 517.2871389421565 0.0 517.2871389421565 0.0 20.51348269989053 0.0 0.0 0 0.0 0.0 0.0 0.0 + DKKKY 1.936 + + 62 + 1 2.299 66753.4 1.0 664 2958 3621 DOHH2_400M_050219_2,3624 DOHH2_400M_050219_2,3624,KEFLDKKKY False True KEFLDKKKY 17.383371 400.232501208782 1551581.875 3621.0 ENST00000465029.5_1_2:111419157-111435602:-|nuORF;;nc|ENSG00000169679|O43683-2|BUB1;;ENSG00000169679|ENST00000302759|BUB1;;nc|ENSG00000169679|O43683-3|BUB1 5.34497594833374 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3626 17.391 217.0 408240.0 25 0 141330.0 + 25287 NAAERRGPL 9 76 492.2724680773028 982.5303832214056 2 492.2727233767509 MULTI CID FTMS 0 0 0 3625 93495.515625 0.2437998766600292 -5 0.0992603302001953 1 Unmodified _NAAERRGPL_ ENSG00000204287|ENST00000395388|HLA-DRA 7.910154910731844 0.6385446671287552 2 M 1 9 11.42 0.0 0.0 1.1623 0.0 0.0 833.4793100786306 0.0 833.4793100786306 0.0 8.945733173425534 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.1623 - 15 + 1 2.297 73390.5 1.0 665 2959 3625 DOHH2_400M_050219_2,3626 DOHH2_400M_050219_2,3626,NAAERRGPL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3627 17.4 494.0 143860.0 25 0 10602.0 + 7113 EEMKKGSQF 9 108 542.2599241683653 1082.5052954035305 2 542.2575561404228 MULTI CID FTMS 0 0 0 3625 32726.091796875 0.0835042996661374 8 -0.2234992980957031 2 Unmodified _EEMKKGSQF_ ENSG00000136628|ENST00000366923|EPRS1 24.020572477871973 0.2255576514309169 2 EE[RK][HQ]EQ 8 5 + 42.668 0.0 0.0 3.9416 3.9416 82.497 0.0 0.0 0.0 1.865677915492512 22.78659694992122 1.865677915492512 16.571362609069734 0 0.805462187404089 2.0 0.75 0.0 EE[RK][HQ]EQ;[VS]A{[RE]|[WV]}[HQ]EQ;[VS]AHR{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EQ;[VS]A[DV]A[HQ]EQ;[VS]AHGV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EQ;EEHHRHAAP;EEHHR{[NV]|[RG]}Y;{[ET]|[MV]}[Q{I|L}]A[HQ]EQ;[VS][HQ]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EQ;{[ET]|[MV]}[RH]{M(Oxidation (M))|F}HEQ 3.9416;2.4107;2.2347;2.1326;2.0039;1.9484;1.7012;1.6641;1.3109;1.2219 -;-;-;-;-;-;-;-;-;- 385 1 2.297 59482.9 1.0 666 2959 3625 DOHH2_400M_050219_2,3627 DOHH2_400M_050219_2,3627,EEMKKGSQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3628 17.414 800.0 175310.0 25 0 12227.0 + 24581 MLHEKTSKL 9 136 543.8014296239371 1085.588306314674 2 543.8022338747978 MULTI CID FTMS 0 0 0 3625 123711.2109375 0.8769560063129617 -1 0.0155181884765625 3 Unmodified _MLHEKTSKL_ ENSG00000104164|ENST00000220531|BLOC1S6;ENST00000564310.1_2_15:45895313-45908032:+|nuORF;ENST00000566184.1_1_15:45879720-45897718:+|nuORF 52.19289622718417 0.0355619053250821 2 {I|L}MHEKTSK{I|L} 9 2 + 91.369 0.0 0.0 8.4166 8.4166 85.915 0.0 0.0 0.0 6.7609125905568135 3.450528104279016 3.450528104279016 3.450528104279016 0 2.613982988912431 2.0 1.274227503252014 0.0 {I|L}MHEKTSK{I|L};{I|L}MHEKTS{I|L}K;M{I|L}HEKTSK{I|L};M{I|L}HEKTS{I|L}K;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HEKTSK{I|L};{I|L}M{I|L}{[DA]|[EG]}[WP]K{I|L};{I|L}M{I|L}W[VP]{[QS]|[NT]}{I|L};{I|L}M{I|L}{[DA]|[EG]}[WP]{I|L}K;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H[SG]{I|L}TSK{I|L};{I|L}M{I|L}W[VP]{[CP]|[EA]}K 8.4166;8.0987;7.7938;7.4759;6.3602;5.5739;5.2743;5.2561;5.2124;4.9564 -;-;+;-;+;-;-;-;-;- + 1324 + 1 2.297 109069.8 0.5699999928474426 667 2959 3625 DOHH2_400M_050219_2,3628 DOHH2_400M_050219_2,3628,MLHEKTSKL True True MLHEKTSKL 17.413871 543.802233874798 2453733.0 3625.0 ENSG00000104164|ENST00000220531|BLOC1S6;;ENST00000566184.1_1_15:45879720-45897718:+|nuORF;;ENST00000564310.1_2_15:45895313-45908032:+|nuORF 5.944414138793945 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3629 17.428 800.0 157730.0 25 0 15061.0 -1 0 53 718.8613572924835 2871.4163233035338 4 719.1128417849541 MULTI CID FTMS 0 0 0 3625 66231.5390625 0.375472549646612 -5 0.0992603302001953 4 2 G 1 -1 11.99 0.0 0.0 0.41755 0.0 0.0 973.472847033016 1837.8944571935072 2811.367304226523 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 G 0.41755 - 8 + 1 2.297 95316.5 0.4099999964237213 668 2959 3625 DOHH2_400M_050219_2,3629 DOHH2_400M_050219_2,3629, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3631 17.432 32.0 1156600.0 25 0 155930.0 + 375 AEDKENYKKF 10 61 424.5470468249914 1270.6193110751742 3 424.5469238162041 MULTI CID FTMS 0 0 0 3630 1394036.875 0.4401635366362512 3 -0.0683956146240234 1 Unmodified _AEDKENYKKF_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 38.17557092003332 0.1768326257063233 2 AE{[QD]|[EN]|[WG]|[KD]|[RS]}E 5 5 49.253 0.0 0.0 3.8763 0.0 0.0 0.0 695.3534029596311 695.3534029596311 32.57007180900061 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.8807196863200843 0.0 + AE{[QD]|[EN]|[WG]|[KD]|[RS]}E 3.8763 + + 61 + 1 2.297 37584.5 1.0 669 2960 3630 DOHH2_400M_050219_2,3631 DOHH2_400M_050219_2,3631,AEDKENYKKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3632 17.435 87.0 986850.0 25 0 273850.0 + 13661 HPVSWKRQAT 10 75 403.8878185392703 1208.641626218011 3 403.8874389529228 MULTI CID FTMS 0 0 0 3630 398343.03125 0.1109672605336647 66 -1.436655044555664 2 Unmodified _HPVSWKRQAT_ REV__ENST00000465617.1_1_10:12123569-12136179:+|nuORF 9.38312468134398 0.6832340498775793 2 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 -1 33.473 0.0 0.0 2.7695 0.0 0.0 0.0 394.2207735651001 394.2207735651001 14.304461535987445 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 2.7695 - 157 + 1 2.297 70065.6 1.0 670 2960 3630 DOHH2_400M_050219_2,3632 DOHH2_400M_050219_2,3632,HPVSWKRQAT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3634 17.439 103.0 453220.0 25 0 34664.0 + 29903 QSDPAPLQH 9 80 496.74363205747886 0 496.7434875369072 PEAK CID FTMS 0 0 0 3633 480856.75 0.6466401215332861 -6 0.1394195556640625 1 Unmodified _QSDPAPLQH_ ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53268946-53269411:-|nuORF;ENST00000466765.1_1_3:53267112-53269174:-|nuORF;ENST00000487660.1_1_3:53268946-53276200:-|nuORF;nc|ENSG00000163931|P29401-2|TKT 68.08070601005525 0.0150358085444205 2 PAP{I|L}Q 5 4 23.148 0.0 0.0 2.3347 0.0 0.0 330.1178850029892 152.04689966373283 482.1647846667221 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.4247425010840047 + PAP{I|L}Q 2.3347 + + 70 + 1 2.297 41476.3 1.0 671 2961 3633 DOHH2_400M_050219_2,3634 DOHH2_400M_050219_2,3634,QSDPAPLQH True True QSDPAPLQH 17.439498 496.743487536907 5895181.5 3633.0 nc|ENSG00000163931|P29401-2|TKT;;ENSG00000163931|ENST00000462138|TKT;;ENST00000487660.1_1_3:53268946-53276200:-|nuORF;;ENST00000460343.5_1_3:53268946-53269411:-|nuORF;;ENST00000466765.1_1_3:53267112-53269174:-|nuORF 8.008676528930664 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3635 17.451 631.0 199820.0 25 0 49848.0 + 13801 HTDMSSSSY 9 105 507.69523264053066 1013.3759123478612 2 507.6953613162041 MULTI CID FTMS 0 0 0 3633 129931.5859375 1.0 0 0.0 2 Unmodified _HTDMSSSSY_ ENSG00000120071|ENST00000432791|KANSL1;ENST00000572218.5_2_17:44108844-44117263:-|nuORF;ENST00000576870.5_2_17:44108844-44117263:-|nuORF;nc|ENSG00000120071|Q7Z3B3-2|KANSL1;nc|ENSG00000120071|Q7Z3B3-4|KANSL1 54.773552608820026 0.0299037012502309 2 [HM]SSD{[MG]|[TS]}SY 9 4 + 31.708 0.0 0.0 3.129 3.129 67.095 0.0 0.0 0.0 1.2221640100076847 1.2221640100076847 1.2221640100076847 1.2221640100076847 0 0.0 0.0 1.5387254899964358 0.0 [HM]SSD{[MG]|[TS]}SY;[HT]DMSSSSY;{[CT]|[{M(Oxidation (M))|F}G]}DHDSSSY;[QA]SSS{[CP]|[EA]}M{[CT]|[{M(Oxidation (M))|F}G]};[HM]SSSMM{[CT]|[{M(Oxidation (M))|F}G]};[TA]{M(Oxidation (M))|F}HDSSSY;[HT]{[MS]|[{M(Oxidation (M))|F}A]}DSSSY;[HT]D{[CP]|[EA]}SS[HM];{[CA]|SS}[Y{M(Oxidation (M))|F}]SSSSY;{[{M(Oxidation (M))|F}C]|[YS]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSSSY 3.129;3.0084;2.6609;2.5044;2.4841;2.4011;1.7017;1.62;1.5281;1.3891 -;+;-;-;-;-;-;-;-;- + 336 + 1 2.297 98959.6 1.0 672 2961 3633 DOHH2_400M_050219_2,3635 DOHH2_400M_050219_2,3635,HTDMSSSSY True True HTDMSSSSY 17.450961 507.695361316204 570092.0 3633.0 ENST00000576870.5_2_17:44108844-44117263:-|nuORF;;nc|ENSG00000120071|Q7Z3B3-2|KANSL1;;nc|ENSG00000120071|Q7Z3B3-4|KANSL1;;ENST00000572218.5_2_17:44108844-44117263:-|nuORF;;ENSG00000120071|ENST00000432791|KANSL1 8.15568749109904 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3636 17.465 800.0 138370.0 25 0 61433.0 -1 0 64 606.330197947205 605.3229214806049 1 606.3305541872978 MULTI CID FTMS 0 0 0 3633 106061.640625 0.7225165023659201 1 -0.0299606323242187 3 2 Y 1 -1 12.474 0.0 0.0 2.0608 0.0 0.0 424.2489906718143 0.0 424.2489906718143 0.0 2.095646538709879 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.0608 - 11 + 1 2.297 83869.1 0.550000011920929 673 2961 3633 DOHH2_400M_050219_2,3636 DOHH2_400M_050219_2,3636, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3638 17.47 127.0 409390.0 25 0 58538.0 + 2870 AVDPQHNGY 9 78 500.7277107199521 999.4408685067042 2 500.7277099490166 MULTI CID FTMS 0 0 0 3637 335926.78125 0.4157787219242745 5 -0.1421661376953125 1 Unmodified _AVDPQHNGY_ ENSG00000170145|ENST00000304987|SIK2 34.10243960390752 0.1078313939113124 2 {[VA]|[{I|L}G]}D{[QS]|[NT]}HP 7 4 44.71 0.0 0.0 4.4735 0.0 0.0 0.0 262.0931490533813 262.0931490533813 30.730231979947646 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}D{[QS]|[NT]}HP 4.4735 - 250 + 1 2.297 46860.7 1.0 674 2962 3637 DOHH2_400M_050219_2,3638 DOHH2_400M_050219_2,3638,AVDPQHNGY True True AVDPQHNGY 17.469814 500.727709949017 9427828.0 3637.0 ENSG00000170145|ENST00000304987|SIK2 7.536829153696696 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3639 17.476 363.0 149190.0 25 0 20075.0 + 378 AEDKENYKKF 10 74 636.3169529306037 1270.6193529280074 2 636.3171874880791 MULTI CID FTMS 0 0 0 3637 174447.40625 0.2968054866870998 5 -0.1421661376953125 2 Unmodified _AEDKENYKKF_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 66.68293810318366 0.0190556348240626 2 [TA]AEAENYKK{M(Oxidation (M))|F} 11 4 + 80.473 0.0 0.0 6.3334 6.3334 80.073 0.0 0.0 0.0 2.4022791681892954 15.070623213458036 2.4022791681892954 2.4022791681892954 0 2.0994850021680094 0.0 0.9604093769761876 0.4247425010840047 [TA]AEAENYKK{M(Oxidation (M))|F};{[CP]|[EA]}DKENYKK{M(Oxidation (M))|F};[TA]AEAEGGYKK{M(Oxidation (M))|F};WWAENYKK{M(Oxidation (M))|F};{[CP]|[EA]}[TA]AENYKK{M(Oxidation (M))|F};{[CP]|[EA]}DKEGGYKK{M(Oxidation (M))|F};{[CP]|[EA]}WWNYKK{M(Oxidation (M))|F};WWAEGGYKK{M(Oxidation (M))|F};{[CP]|[EA]}[TA]AEGGYKK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{[TV]|[{I|L}S]}ENYKK{M(Oxidation (M))|F} 6.3334;6.1443;5.615;5.572;5.5214;5.4231;4.9065;4.8473;4.803;4.4358 -;+;-;-;-;-;-;-;-;- + 704 1 2.297 48839.5 1.0 675 2962 3637 DOHH2_400M_050219_2,3639 DOHH2_400M_050219_2,3639,AEDKENYKKF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3640 17.479 130.0 631410.0 25 0 129930.0 + 1019 AGASSLVFVP 10 85 474.2615684201202 946.5085839070404 2 474.2614013552666 MULTI CID FTMS 0 0 0 3637 331540.84375 0.0406716838689353 -8 0.1805934906005859 3 Unmodified _AGASSLVFVP_ REV__ENST00000399231.7_1_15:52603151-52603319:-|nuORF 21.74664581756881 0.480091245866545 2 [{I|L}T]AQSVSNK 9 -1 + 70.824 0.0 0.0 7.4827 7.4827 91.583 0.0 0.0 0.0 49.85531242661757 11.706962271689749 11.706962271689749 9.208187539523747 0 0.8494850021680094 2.0 0.0 0.4247425010840047 [{I|L}T]AQSVSNK;[{I|L}T]A[AG]SVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSGGK;[{I|L}T]AQ[{M(Oxidation (M))|F}T]AVP;[{I|L}T]AQ[{M(Oxidation (M))|F}T]VAP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVSQAVP;[{I|L}T]A[{M(Oxidation (M))|F}T]QAVP;[{I|L}T]A[AG][{M(Oxidation (M))|F}T]AVP;[{I|L}T]A[AG][{M(Oxidation (M))|F}T]VAP 7.4827;6.5098;6.5098;5.5416;5.2107;5.0233;4.8456;4.8185;3.789;3.6017 -;-;-;-;-;-;-;-;-;- 220 + 1 2.297 71451.2 1.0 676 2962 3637 DOHH2_400M_050219_2,3640 DOHH2_400M_050219_2,3640,AGASSLVFVP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3641 17.482 165.0 298150.0 25 0 25090.0 + 11090 GEEENQKRYY 10 82 439.20205451587736 1314.584334147832 3 439.2021667361259 MULTI CID FTMS 0 0 0 3637 127165.078125 0.4764327905842154 -4 0.0968513488769531 4 Unmodified _GEEENQKRYY_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2 17.86316937532769 0.5478153791579383 2 WEENDT 6 7 45.182 0.0 0.0 3.437 0.0 0.0 0.0 537.3050020807249 537.3050020807249 24.21327198560853 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.0 WEENDT 3.437 - 516 + 1 2.297 45026.0 1.0 677 2962 3637 DOHH2_400M_050219_2,3641 DOHH2_400M_050219_2,3641,GEEENQKRYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3642 17.496 800.0 121330.0 25 0 14768.0 + 28447 PTDMEHTGHY 10 120 594.2423705638743 1186.4701881945484 2 594.2415649294853 MULTI CID FTMS 0 0 0 3637 82846.1875 0.90843020528942 3 -0.0798683166503906 5 Unmodified _PTDMEHTGHY_ ENSG00000126860|ENST00000462804|EVI2A;nc|ENSG00000126860|P22794-2|EVI2A 32.78568957990786 0.2337485590374503 2 PTDMEH{[SA]|[TG]}NW 10 2 + 48.379 0.0 0.0 4.0775 4.0775 78.987 0.0 0.0 0.0 35.6144453263381 3.187587626244131 3.187587626244131 9.164539485499256 0 0.6139829889124311 1.6989700043360187 0.0 0.0 PTDMEH{[SA]|[TG]}NW;PTDMEH{[SA]|[TG]}GGW 4.0775;3.3051 -;- 139 + 1 2.297 75520.6 0.4900000095367431 678 2962 3637 DOHH2_400M_050219_2,3642 DOHH2_400M_050219_2,3642,PTDMEHTGHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3645 17.505 130.0 534150.0 25 0 41805.0 + 32724 SEAPSGESRKF 11 84 398.8631985001984 1193.567766100795 3 398.8628723025322 MULTI CID FTMS 0 0 0 3644 377271.5625 0.0722860995021405 -6 0.1321468353271484 1 Unmodified _SEAPSGESRKF_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 19.62595529434964 0.626904505265593 2 {[ES]|[DT]|[{I|L}C]}APSW 6 6 37.664 0.0 0.0 3.1556 0.0 0.0 0.0 533.2834322576024 533.2834322576024 27.0678680512915 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}APSW 3.1556 - 51 + 1 2.297 61818.9 1.0 679 2964 3644 DOHH2_400M_050219_2,3645 DOHH2_400M_050219_2,3645,SEAPSGESRKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3646 17.512 377.0 164740.0 25 0 19914.0 + 42730 VVDEHTGQY 9 95 524.24020368244 1046.46585443168 2 524.2405273318291 MULTI CID FTMS 0 0 0 3644 119894.0625 0.6807611743924737 1 -0.0445728302001953 2 Unmodified _VVDEHTGQY_ ENSG00000135541|ENST00000265602|AHI1;nc|ENSG00000135541|Q8N157-2|AHI1;nc|ENSG00000135541|Q8N157-3|AHI1 22.736283301280096 0.2418982879461534 2 VVDE 4 5 55.745 0.0 0.0 5.327 0.0 0.0 0.0 601.2386568658811 601.2386568658811 40.314797377188754 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + VVDE 5.327 + + 171 + 1 2.297 57817.1 1.0 680 2964 3644 DOHH2_400M_050219_2,3646 DOHH2_400M_050219_2,3646,VVDEHTGQY False True VVDEHTGQY 17.511933 524.240527331829 861182.4375 3644.0 ENSG00000135541|ENST00000265602|AHI1;;nc|ENSG00000135541|Q8N157-2|AHI1;;nc|ENSG00000135541|Q8N157-3|AHI1 5.043231964111328 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3647 17.526 800.0 257340.0 25 0 32150.0 + 32726 SEAPSGESRKF 11 114 597.7908902384897 1193.5672275437794 2 597.7911254763603 MULTI CID FTMS 0 0 0 3644 188497.90625 0.0778839727671635 -6 0.1321468353271484 3 Unmodified _SEAPSGESRKF_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 61.08992128646608 0.0647217981198246 2 {[ES]|[DT]|[{I|L}C]}APSG[H{I|L}]KAD 11 5 58.065 0.0 0.0 4.8649 0.0 0.0 0.0 98.02481256656483 98.02481256656483 36.5500233001784 0.0 0.0 0.0 0 0.0 0.0 1.829689690656103 0.3807196863200844 {[ES]|[DT]|[{I|L}C]}APSG[H{I|L}]KAD 4.8649 - 1176 + 1 2.297 158252.1 0.8399999737739563 681 2964 3644 DOHH2_400M_050219_2,3647 DOHH2_400M_050219_2,3647,SEAPSGESRKF True True SEAPSGESRKF 17.525764 597.79112547636 71116918.0 3644.0 nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 8.76233164469401 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3648 17.54 800.0 152850.0 25 0 17314.0 + 11091 GEEENQKRYY 10 107 658.2997625369269 1314.5849721406537 2 658.2993041872978 MULTI CID FTMS 0 0 0 3644 153994.359375 0.8335594214906019 -2 0.0352954864501953 4 Unmodified _GEEENQKRYY_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2 83.27773906761396 0.014381580010361 2 {[DA]|[EG]}AS[RK]QNEE 10 8 70.25 0.0 0.0 5.3439 0.0 0.0 0.0 183.04196136536044 183.04196136536044 41.321968054957736 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.6203715150305281 1.110924374808178 {[DA]|[EG]}AS[RK]QNEE 5.3439 - 1696 1 2.297 92015.3 0.7200000286102295 682 2964 3644 DOHH2_400M_050219_2,3648 DOHH2_400M_050219_2,3648,GEEENQKRYY True True GEEENQKRYY 17.539602 658.299304187298 2210534.0 3644.0 ENST00000521903.5_1_8:124361561-124413087:-|nuORF;;nc|ENSG00000156802|Q6PL18-2|ATAD2;;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;;ENSG00000156802|ENST00000287394|ATAD2;;ENST00000517666.5_1_8:124333376-124408650:-|nuORF 7.812339782714844 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3649 17.545 269.0 362790.0 25 0 15736.0 -1 0 137 352.1743287399672 351.16705227336723 1 352.1761962771416 MULTI CID FTMS 0 0 0 3644 267482.0 0.848600730777677 4 -0.1259899139404297 5 2 Y 1 -1 13.495 0.0 0.0 3.8429 0.0 0.0 170.09306042942035 0.0 170.09306042942035 0.0 4.370470067515502 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.8429 - 32 + 1 2.297 82230.4 1.0 683 2964 3644 DOHH2_400M_050219_2,3649 DOHH2_400M_050219_2,3649, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3651 17.552 199.0 615450.0 25 0 41050.0 + 6480 EAHAKVRL 8 89 462.2744711727637 922.5343894123272 2 462.2741882205009 MULTI CID FTMS 0 0 0 3650 363120.15625 0.5684102058875756 -2 0.0484657287597656 1 Unmodified _EAHAKVRL_ ENSG00000104738|ENST00000649973|MCM4 61.357469665136826 0.1155423183535659 2 EAHAKV{I|L}R 8 2 + 62.794 0.0 0.0 6.8067 6.8067 93.502 0.0 0.0 0.0 45.69155572380792 7.371250542002343 7.371250542002343 19.4193800377178 0 0.6694451763165201 1.5228787452803376 0.0 0.3807196863200844 EAHAKV{I|L}R;EAH{I|L}[KG]{I|L}R;EA{I|L}H[KG]{I|L}R;{I|L}{[CP]|[EA]}H[KG]{I|L}R 6.8067;4.7017;3.55;0.92595 -;-;-;- 108 + 1 2.297 99477.2 1.0 684 2965 3650 DOHH2_400M_050219_2,3651 DOHH2_400M_050219_2,3651,EAHAKVRL True True EAHAKVRL 17.551724 462.274188220501 2398021.75 3650.0 ENSG00000104738|ENST00000649973|MCM4 5.072851022084554 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3652 17.562 609.0 292970.0 25 0 25626.0 -1 0 70 543.8662020480472 2714.294627907236 5 544.2671996951103 MULTI CID FTMS 0 0 0 3650 106885.0390625 0.5478848864210755 -3 0.0798683166503906 2 2 Y 1 -1 11.99 0.0 0.0 0.44172 0.0 0.0 1881.863575761452 666.3447393029494 2548.208315064401 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 Y 0.44172 - 61 + 1 2.297 139851.7 1.0 685 2965 3650 DOHH2_400M_050219_2,3652 DOHH2_400M_050219_2,3652, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3653 17.569 374.0 238090.0 25 0 22190.0 + 35502 STMSTNGIPR 10 116 540.2609248184638 1078.5072967037274 2 540.2605468630791 MULTI CID FTMS 0 0 0 3650 225878.265625 0.0201150833849987 -9 0.2452449798583984 3 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 79.59630418116434 0.0173986606250113 2 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 79.148 0.0 0.0 7.3387 7.3387 82.705 0.0 0.0 0.0 7.269987279362624 2.218487496163561 2.218487496163561 2.218487496163561 0 0.9247425010840048 0.0 0.8494850021680094 0.9802046884880936 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STN[R{I|L}]GP;{[MG]|[TS]}{M(Oxidation (M))|F}STK[{M(Oxidation (M))|F}V]Y;{[MG]|[TS]}{M(Oxidation (M))|F}STGG[R{I|L}]GP;AAE[VG]KTS[WM];{[TV]|[{I|L}S]}[Q{I|L}]NTS[WM];{[TV]|[{I|L}S]}[Q{I|L}]GGTS[WM] 7.3387;7.133;6.4889;6.2832;4.968;4.4934;4.1183;3.8882;3.0205;2.1667 -;+;-;-;-;-;-;-;-;- + 353 + 1 2.297 72356.0 1.0 686 2965 3650 DOHH2_400M_050219_2,3653 DOHH2_400M_050219_2,3653,STMSTNGIPR True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3654 17.583 800.0 217680.0 25 0 31088.0 -1 0 65 679.5814258549647 2714.2965975534585 4 679.8310424685478 MULTI CID FTMS 0 0 0 3650 83607.3359375 0.4582021425475855 -1 0.0445728302001953 4 2 YD 2 -1 25.217 0.0 0.0 0.92903 0.0 0.0 0.0 2433.1523614519137 2433.1523614519137 17.11758134947864 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YD 0.92903 - 54 + 1 2.297 133242.8 0.4699999988079071 687 2965 3650 DOHH2_400M_050219_2,3654 DOHH2_400M_050219_2,3654, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3656 17.587 58.0 868530.0 25 0 109300.0 18169 KTTANLAALK 10 67 515.8162418996212 1029.6179308660423 2 515.8165161013603 MULTI CID FTMS 0 0 0 3655 988302.9375 0.2820200449652701 6 -0.1350879669189453 1 Unmodified _KTTANLAALK_ ENSG00000047188|ENST00000161863|YTHDC2 33.4449034751529 0.2267874087365337 2 KT{I|L}Q[QT]{I|L}AK 9 6 + 70.834 0.0 0.0 6.8796 6.8796 87.917 0.0 0.0 0.0 63.29816627181504 16.979823445252407 16.979823445252407 7.958800173440743 0 1.6382104921644451 0.0 0.4247425010840047 0.6382104921644451 KT{I|L}Q[QT]{I|L}AK;KT{I|L}[TA]{[QG]|[NA]}{I|L}AK;KT{I|L}[AG][QT]{I|L}AK;KT{I|L}[KG][DG]{I|L}AK;[QT]{I|L}Q[KT]{I|L}AK 6.8796;6.1067;5.9853;5.6433;2.1482 -;-;-;-;- 176 + 1 2.297 44506.8 1.0 688 2966 3655 DOHH2_400M_050219_2,3656 DOHH2_400M_050219_2,3656,KTTANLAALK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3657 17.591 195.0 298490.0 25 0 16488.0 5630 DPDDYDDGFS 10 93 573.1969597463074 1144.3793665594146 2 573.1974365115166 MULTI CID FTMS 0 0 0 3655 390013.625 0.7121851187498666 2 -0.0432491302490234 2 Unmodified _DPDDYDDGFS_ chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1;ENSG00000073584|ENST00000348513|SMARCE1;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;nc|ENSG00000073584|Q969G3-2|SMARCE1;nc|ENSG00000073584|Q969G3-3|SMARCE1;nc|ENSG00000073584|Q969G3-4|SMARCE1;nc|ENSG00000073584|Q969G3-5|SMARCE1;nc|ENSG00000073584|Q969G3-6|SMARCE1 14.838274106304384 0.5985701837916485 2 [DP]NAPN 6 8 35.718 0.0 0.0 3.1212 0.0 0.0 0.0 533.1038206017541 533.1038206017541 9.5205343810445 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.4247425010840047 0.3054621874040891 [DP]NAPN 3.1212 - 341 1 2.297 48310.6 1.0 689 2966 3655 DOHH2_400M_050219_2,3657 DOHH2_400M_050219_2,3657,DPDDYDDGFS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3658 17.593 71.0 836420.0 25 0 129840.0 -1 SERALALMK 9 77 517.78633177312 1033.5581106130398 2 517.7866699099541 MULTI CID FTMS 0 0 0 3655 648474.1875 0.8036991306597551 1 -0.0241298675537109 3 Oxidation (M) _SERALALM(Oxidation (M))K_ ENSG00000111271|ENST00000313698|ACAD10;ENST00000547491.1_1_12:112186933-112194274:+|nuORF;nc|ENSG00000111271|Q6JQN1-5|ACAD10 20.453626601364224 0.2830276176381075 2 KTT[{I|L}P][WP]K 8 -1 45.367 0.0 0.0 4.3894 0.0 0.0 63.99668887571051 0.0 63.99668887571051 0.0 24.912581433031843 0.0 0.0 0 0.9247425010840048 0.0 1.274227503252014 0.2742275032520141 KTT[{I|L}P][WP]K 4.3894 - 190 + 1 2.297 49553.9 1.0 690 2966 3655 DOHH2_400M_050219_2,3658 DOHH2_400M_050219_2,3658,SERALALMK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3659 17.595 108.0 521140.0 25 0 47691.0 + + 2793 TATPTIMK 8 100 439.7358721219064 877.4571913106129 2 439.7362548708916 MULTI CID FTMS 0 0 0 3655 448199.125 0.4238455929949024 -5 0.1479969024658203 4 Unmodified _ATTWVTVT_ ENSG00000020577|ENST00000554335|SAMD4A;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 23.1484247019978 0.5573009939494978 2 [TA]TP{I|L}T{M(Oxidation (M))|F}K 8 -1 [TA] + + 39.326 22.218 12.912 4.4819 4.4819 53.475 0.0 0.0 0.0 0.0 3.462798622927977 0.0 0.0 0 1.0 0.0 0.5 0.0 [TA]TP{I|L}T{M(Oxidation (M))|F}K 4.4819 - 145 + 1 2.297 49088.9 1.0 691 2966 3655 DOHH2_400M_050219_2,3659 DOHH2_400M_050219_2,3659,ATTWVTVT False False TATPTIMK 17.595201 439.736254870892 8135923.0 3655.0 ENSG00000020577|ENST00000554335|SAMD4A;;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 2.9318382839361825 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3660 17.601 299.0 277520.0 25 0 36104.0 + 45265 YSDHPSGGSY 10 101 535.2145347949951 1068.41451665679 2 535.2140991091728 MULTI CID FTMS 0 0 0 3655 278686.5 0.4366120545505587 4 -0.0718193054199218 5 Unmodified _YSDHPSGGSY_ ENSG00000147274|ENST00000320676|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;nc|ENSG00000147274|P38159-2|RBMX 47.74868867922204 0.0933642699623533 2 YYSY 4 7 43.175 0.0 0.0 4.0411 0.0 0.0 474.1871510236344 0.0 474.1871510236344 0.0 29.680475292681265 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 YYSY 4.0411 - 338 1 2.297 70443.7 1.0 692 2966 3655 DOHH2_400M_050219_2,3660 DOHH2_400M_050219_2,3660,YSDHPSGGSY True True YSDHPSGGSY 17.600681 535.214099109173 6909919.5 3655.0 ENSG00000147274|ENST00000320676|RBMX;;nc|ENSG00000147274|P38159-2|RBMX;;ENSG00000213516|ENST00000652648|RBMXL1 9.16507069269816 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3661 17.607 355.0 409600.0 25 0 22492.0 + 7185 EEQAVRPKY 9 131 560.2930780081784 1118.5716030831568 2 560.2931396365166 MULTI CID FTMS 0 0 0 3655 279142.0 0.1881104900295719 -5 0.1479969024658203 6 Unmodified _EEQAVRPKY_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 110.6747026088012 0.0053351249510064 2 EEQAVRPKY 9 0 + 69.569 0.0 0.0 6.2194 6.2194 86.223 0.0 0.0 0.0 7.971639811729709 37.04960296019123 7.971639811729709 8.507112333562858 0 2.8424778212679485 1.6989700043360187 2.1989700043360187 0.0 + + EEQAVRPKY;[AG]EEAVRPKY;[AG]EAEVRPKY;[AG]AEEVRPKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EAVRPKY;Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}V[VG]PKY;[QA]EEVRPKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AEVRPKY;Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}V[VG]PYK;[QA]EEVRPYK 6.2194;5.4589;4.5319;4.509;4.4279;4.0863;4.0022;3.5009;2.6536;2.5695 +;-;-;-;-;-;-;-;-;- + 544 1 2.297 110712.4 1.0 693 2966 3655 DOHH2_400M_050219_2,3661 DOHH2_400M_050219_2,3661,EEQAVRPKY True True EEQAVRPKY 17.607095 560.293139636517 13433818.0 3655.0 ENSG00000134057|ENST00000256442|CCNB1;;nc|ENSG00000134057|P14635-2|CCNB1 7.071638902028401 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3663 17.612 153.0 997620.0 25 0 92913.0 -1 0 53 575.2899227974052 2871.413231654026 5 575.4911987185478 MULTI CID FTMS 0 0 0 3662 798710.6875 1.0 0 0.0 1 2 G 1 -1 4.6041 0.0 0.0 0.16034 0.0 0.0 2369.1468493126417 442.22101770572505 2811.3678670183667 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.16034 - 5 + 1 2.297 120611.7 1.0 694 2967 3662 DOHH2_400M_050219_2,3663 DOHH2_400M_050219_2,3663, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3664 17.626 800.0 130560.0 25 0 7260.2 + 11063 GEAESRNSNF 10 150 555.7440890580739 1109.4736251829477 2 555.7443115115166 MULTI CID FTMS 0 0 0 3662 107365.7265625 0.7866339553452799 -1 0.0241298675537109 2 Unmodified _GEAESRNSNF_ ENSG00000133606|ENST00000255977|MKRN1;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;nc|ENSG00000133606|Q9UHC7-3|MKRN1;nc|ENSG00000133606|Q9UHC7-4|MKRN1 47.7319792270244 0.0934623409360514 2 {[DA]|[EG]}AE{M(Oxidation (M))|F}PQW{M(Oxidation (M))|F} 9 5 + 65.481 0.0 0.0 5.9019 5.9019 84.182 0.0 0.0 0.0 5.966649594412566 7.1621100897589685 5.966649594412566 7.1621100897589685 0 1.5682503180159344 1.5228787452803376 0.0 1.3098943791441968 {[DA]|[EG]}AE{M(Oxidation (M))|F}PQW{M(Oxidation (M))|F};{[DA]|[EG]}AE{M(Oxidation (M))|F}P{[CT]|[{M(Oxidation (M))|F}G]}EK;{[DA]|[EG]}AE{M(Oxidation (M))|F}PQ{M(Oxidation (M))|F}W;{[DA]|[EG]}AE{M(Oxidation (M))|F}[WD]EK;{[DA]|[EG]}AE[PA]K{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F};{[DA]|[EG]}AE{M(Oxidation (M))|F}{[NV]|[RG]}T{M(Oxidation (M))|F}P;{[DA]|[EG]}AE{M(Oxidation (M))|F}{[NV]|[RG]}{[C(Carbamidomethyl (C))G]|[NC]}K;WAE{M(Oxidation (M))|F}[WK]{M(Oxidation (M))|F}P;{[DA]|[EG]}V{[HG]|PP}VDHN{M(Oxidation (M))|F};{[DA]|[EG]}{M(Oxidation (M))|F}{[CP]|[EA]}PQW{M(Oxidation (M))|F} 5.9019;5.2564;5.1569;4.939;4.6649;4.3465;3.8435;3.6246;3.5623;3.4204 -;-;-;-;-;-;-;-;-;- 1803 + 1 2.297 79799.3 0.5299999713897705 695 2967 3662 DOHH2_400M_050219_2,3664 DOHH2_400M_050219_2,3664,GEAESRNSNF True True GEAESRNSNF 17.626241 555.744311511517 617698.0 3662.0 ENSG00000133606|ENST00000255977|MKRN1;;nc|ENSG00000133606|Q9UHC7-3|MKRN1;;nc|ENSG00000133606|Q9UHC7-2|MKRN1;;ENST00000475010.5_1_7:140155450-140179030:-|nuORF;;nc|ENSG00000133606|Q9UHC7-4|MKRN1 5.627919514973958 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3666 17.631 75.0 906710.0 25 0 297410.0 23145 LSPVAIEQTSL 11 57 579.3227301614392 1156.6309073896782 2 579.3226806521416 MULTI CID FTMS 0 0 0 3665 837561.9375 0.38075704700763 6 -0.1764087677001953 1 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 20.580933911654288 0.6070398941446662 2 TS{I|L} 3 8 30.49 0.0 0.0 2.6361 0.0 0.0 837.4571565669241 0.0 837.4571565669241 0.0 20.00508444608478 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 + TS{I|L} 2.6361 + + 14 1 2.297 54199.7 1.0 696 2968 3665 DOHH2_400M_050219_2,3666 DOHH2_400M_050219_2,3666,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3667 17.645 800.0 91476.0 25 0 9354.7 + 16617 KEFYQFPRYWW 11 69 550.6028454294928 1648.7867068886785 3 550.9373657107353 MULTI CID FTMS 0 0 0 3665 70257.15625 0.6008915167196803 1 -0.0183353424072265 2 Unmodified _KEFYQFPRYWW_ REV__ENSG00000198964|ENST00000361781|SGMS1;REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1 1.1097533296519684 0.8699120469545434 2 {I|L}GSGGS{I|L} 7 -1 52.497 0.0 0.0 3.184 0.0 0.0 729.3167494685598 345.15339075260005 1074.47014022116 0.0 0.0 0.0 0.0 0 1.3807196863200843 0.0 0.75 0.0 {I|L}GSGGS{I|L} 3.184 - 303 + 1 2.297 60966.3 0.5799999833106995 697 2968 3665 DOHH2_400M_050219_2,3667 DOHH2_400M_050219_2,3667,KEFYQFPRYWW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3669 17.649 38.0 1390900.0 25 0 201370.0 + 35366 STDPRPASY 9 83 497.235353926595 992.45615491999 2 497.2336608767509 MULTI CID FTMS 0 0 0 3668 1202499.5 0.2239975314623524 -4 0.0997524261474609 1 Unmodified _STDPRPASY_ ENSG00000103126|ENST00000262320|AXIN1;nc|ENSG00000103126|O15169-2|AXIN1 37.97399986684836 0.0865783450051559 2 P 1 8 14.604 0.0 0.0 1.4715 0.0 0.0 877.3923178001643 0.0 877.3923178001643 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 1.4715 + + 62 + 1 2.284 46319.5 1.0 698 2969 3668 DOHH2_400M_050219_2,3669 DOHH2_400M_050219_2,3669,STDPRPASY True True STDPRPASY 17.649272 497.233660876751 24976580.0 3668.0 nc|ENSG00000103126|O15169-2|AXIN1;;ENSG00000103126|ENST00000262320|AXIN1 3.173910220464071 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3670 17.652 121.0 499390.0 25 0 128120.0 + 23289 LSYKTCRL 8 60 492.2724680773028 982.5303832214056 2 492.2722045779228 MULTI CID FTMS 0 0 0 3668 195444.265625 0.5096424949876839 5 -0.1580734252929687 2 Unmodified _LSYKTCRL_ REV__ENST00000433197.3_1_17:62120886-62120964:-|nuORF 4.3292370932331545 0.7980541185046766 2 W 1 -1 13.495 0.0 0.0 1.3735 0.0 0.0 778.4407816362478 0.0 778.4407816362478 0.0 13.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.3735 - 6 + 1 2.284 49954.8 1.0 699 2969 3668 DOHH2_400M_050219_2,3670 DOHH2_400M_050219_2,3670,LSYKTCRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3671 17.655 153.0 467020.0 25 0 74389.0 + -1 EKMPFVAPK 9 87 531.7864961422808 1061.5584393513616 2 531.7842895388603 MULTI CID FTMS 0 0 0 3668 296325.9375 0.5764955861968337 -3 0.06158447265625 3 Oxidation (M) _EKM(Oxidation (M))PFVAPK_ REV__ENST00000480881.1_1_9:115179142-115201087:+|nuORF 19.256988751693697 0.3154191944385105 2 Q{M(Oxidation (M))|F}K 3 -1 27.619 0.0 0.0 2.6018 0.0 0.0 640.3580478796761 0.0 640.3580478796761 0.0 1.6602546405136742 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 Q{M(Oxidation (M))|F}K 2.6018 - 135 1 2.284 61166.0 1.0 700 2969 3668 DOHH2_400M_050219_2,3671 DOHH2_400M_050219_2,3671,EKMPFVAPK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3673 17.667 583.0 164900.0 25 0 8318.9 + 7823 ELKHHHVTL 9 117 557.3117750077362 1112.6089970822725 2 557.3116332888603 MULTI CID FTMS 0 0 0 3672 153219.234375 1.0 0 0.0 1 Unmodified _ELKHHHVTL_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 72.96794272382148 0.0199516581995792 2 SHVT{I|L} 5 5 47.222 0.0 0.0 4.2443 0.0 0.0 557.3040638654312 0.0 557.3040638654312 0.0 9.658829374917469 0.0 0.0 0 1.134400500525261 0.0 1.924742501084005 0.0 SHVT{I|L} 4.2443 - 656 1 2.284 74724.2 1.0 701 2970 3672 DOHH2_400M_050219_2,3673 DOHH2_400M_050219_2,3673,ELKHHHVTL True True ELKHHHVTL 17.667286 557.31163328886 577769.8125 3672.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 5.336193720499675 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3674 17.676 467.0 215290.0 25 0 12506.0 + 25486 NELHVQEEK 9 113 563.280200639064 1124.545848344928 2 563.2805053591728 MULTI CID FTMS 0 0 0 3672 130607.046875 0.3677167772813408 -2 0.0285701751708984 2 Unmodified _NELHVQEEK_ REV__ENSG00000204186|ENST00000374423|ZDBF2 46.0223103267499 0.0490911897871712 2 EVQHVDAAEK 10 -1 + 113.2 0.0 0.0 10.066 10.066 91.956 0.0 0.0 0.0 93.48934971957966 18.279550148593486 18.279550148593486 8.363109537310862 0 3.4604093769761874 0.0 1.1237125054200234 0.8252574989159953 EVQHVDAAEK;EVQK{M(Oxidation (M))|F}{M(Oxidation (M))|F}AEK;EV[AG]HVDAAEK;EVQHVGEAEK;EV[AG]K{M(Oxidation (M))|F}{M(Oxidation (M))|F}AEK;EVQK{M(Oxidation (M))|F}A{M(Oxidation (M))|F}EK;EV[AG]HVGEAEK;EVQHS[TP]AEK;EV[AG]K{M(Oxidation (M))|F}A{M(Oxidation (M))|F}EK;{NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK 10.066;9.3225;9.2512;8.773;8.5037;8.2528;7.9581;7.5945;7.434;7.0735 -;-;-;-;-;-;-;-;-;- 2334 + 1 2.284 83711.6 1.0 702 2970 3672 DOHH2_400M_050219_2,3674 DOHH2_400M_050219_2,3674,NELHVQEEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3675 17.689 800.0 104430.0 25 0 7124.8 + 29905 QSDPTQSGMY 10 144 565.226316530667 1128.4380801281338 2 565.2267333865166 MULTI CID FTMS 0 0 0 3672 89772.5390625 0.4688582161992115 -3 0.0476894378662109 3 Oxidation (M) _QSDPTQSGM(Oxidation (M))Y_ ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1 83.42873516780209 0.014257832770272 2 {[QS]|[NT]}D[TP]QSG{M(Oxidation (M))|F}Y 10 0 + 55.371 0.0 0.0 4.9068 4.9068 73.436 0.0 0.0 0.0 1.3422882013526305 2.7547017667189664 1.3422882013526305 1.3422882013526305 0 1.9049471895720984 0.638272163982407 2.2302046884880937 0.6421590589602533 + + {[QS]|[NT]}D[TP]QSG{M(Oxidation (M))|F}Y;[AG]SD[TP]QSG{M(Oxidation (M))|F}Y;[WC(Carbamidomethyl (C))]GSQQ[NS]Y;[WC(Carbamidomethyl (C))]GSQ[TP]MY;[YT][YT]QSG{M(Oxidation (M))|F}Y;[WC(Carbamidomethyl (C))]GSQ[AG][NS]Y;[WC(Carbamidomethyl (C))]GS[AG]Q[NS]Y;[YT]GS[{M(Oxidation (M))|F}T]SG{M(Oxidation (M))|F}Y;[WC(Carbamidomethyl (C))]GS[AG][TP]MY;[DP][C(Carbamidomethyl (C))R]QSG{M(Oxidation (M))|F}Y 4.9068;4.7879;4.4208;4.28;3.6969;3.6048;3.6048;3.2691;3.1933;2.8305 +;-;-;-;-;-;-;-;-;- + 1264 1 2.284 65701.2 0.5400000214576721 703 2970 3672 DOHH2_400M_050219_2,3675 DOHH2_400M_050219_2,3675,QSDPTQSGMY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3677 17.705 800.0 124550.0 25 0 17965.0 + 376 AEDKENYKKF 10 157 424.5470468249914 1270.6193110751742 3 424.5456420779228 MULTI CID FTMS 0 0 0 3676 56925.265625 0.0179740053443407 14 -0.3818111419677734 1 Unmodified _AEDKENYKKF_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 29.84058131909904 0.2982332456971691 2 AEDK 4 6 52.3 0.0 0.0 4.1161 0.0 0.0 0.0 824.3928316705686 824.3928316705686 28.11849288843574 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.5 0.0 + AEDK 4.1161 + + 266 + 1 2.284 86314.7 0.4399999976158142 704 2971 3676 DOHH2_400M_050219_2,3677 DOHH2_400M_050219_2,3677,AEDKENYKKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3678 17.707 45.0 1112400.0 25 0 208000.0 + 34631 SPMSRTSFG 9 73 485.2264838932184 968.4384148532368 2 485.2264892458916 MULTI CID FTMS 0 0 0 3676 1082312.875 0.4642622482134877 -3 0.0631046295166015 2 Unmodified _SPMSRTSFG_ REV__ENSG00000085511|ENST00000392142|MAP3K4 27.628801355627647 0.1796483985696185 2 SPA{M(Oxidation (M))|F}P[HN]{[TV]|[{I|L}S]} 9 -1 + 55.053 0.0 0.0 5.6847 5.6847 90.097 0.0 0.0 0.0 38.79461387521118 5.672874778693355 5.672874778693355 22.16067799904572 0 1.8182503180159344 2.0 0.3494850021680094 0.3252574989159953 SPA{M(Oxidation (M))|F}P[HN]{[TV]|[{I|L}S]};SP[WE][HN]{[TV]|[{I|L}S]};[PS]M[HN]P{[WT]|[RM]};S[WE]P[HN]{[TV]|[{I|L}S]};[PS][{M(Oxidation (M))|F}T][KC]{[WT]|[RM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NA{M(Oxidation (M))|F}P{[WT]|[RM]};[PA]{M(Oxidation (M))|F}[HN]P{[WT]|[RM]};[HN]PA{M(Oxidation (M))|F}P{[WT]|[RM]};[VG]{[SA]|[TG]}[HD]P{[WT]|[RM]};[VG][{M(Oxidation (M))|F}E][KC]{[WT]|[RM]} 5.6847;3.3965;3.2383;2.4166;1.8765;1.1422;1.1027;0.64954;0.54708;0.45259 -;-;-;-;-;-;-;-;-;- 233 + 1 2.284 45031.2 1.0 705 2971 3676 DOHH2_400M_050219_2,3678 DOHH2_400M_050219_2,3678,SPMSRTSFG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3679 17.708 61.0 1117800.0 25 0 94721.0 + 26330 NSDINSNHY 9 92 532.2256017434369 1062.4366505536736 2 532.2255737185478 MULTI CID FTMS 0 0 0 3676 712683.875 0.4956245901285927 -2 0.044769287109375 3 Unmodified _NSDINSNHY_ ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1 103.41943736471065 0.0091853052135676 2 NSD{I|L}NSNYH 9 2 + 94.45 0.0 0.0 8.8899 8.8899 93.329 0.0 0.0 0.0 71.40688594881794 10.325930211995 10.325930211995 9.208187539523747 0 1.2302046884880935 1.6989700043360187 0.3054621874040891 1.5356668758921828 NSD{I|L}NSNYH;NSD{I|L}GGSNYH;NSD{I|L}NSGGYH;NSD{[QS]|[NT]}VNYH;NSD{I|L}[WE]YH;NSD{I|L}Y[WE]H;NSD{I|L}GGSGGYH;NSD{[QS]|[NT]}VGGYH;[NS]D{I|L}NW[WE];[NS]D{[WN]|[YH]}{I|L}[WE] 8.8899;8.0232;7.7357;6.3574;6.2514;5.9266;5.7152;5.2032;5.1019;5.0149 -;-;-;-;-;-;-;-;-;- 1137 + 1 2.284 57317.1 1.0 706 2971 3676 DOHH2_400M_050219_2,3679 DOHH2_400M_050219_2,3679,NSDINSNHY True True NSDINSNHY 17.708148 532.225573718548 18034255.5 3676.0 nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1;;ENSG00000135049|ENST00000357081|AGTPBP1 8.036628405253092 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3680 17.718 570.0 251710.0 25 0 52748.0 + 34946 SQKIKPQV 8 129 464.2846695617845 926.5547861903692 2 464.2849304080009 MULTI CID FTMS 0 0 0 3676 120588.8125 1.0 0 0.0 4 Unmodified _SQKIKPQV_ ENSG00000171320|ENST00000305188|ESCO2;ENST00000524293.1_1_8:27633031-27634707:+|nuORF 21.74664581756881 0.5868176546531598 2 {[QS]|[NT]}K{I|L}KVDG 8 3 25.61 0.0 0.0 2.764 0.0 0.0 0.0 68.05143152408436 68.05143152408436 9.156687756324686 0.0 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 {[QS]|[NT]}K{I|L}KVDG 2.764 - 229 + 1 2.284 118030.8 1.0 707 2971 3676 DOHH2_400M_050219_2,3680 DOHH2_400M_050219_2,3680,SQKIKPQV False True SQKIKPQV 17.718134 464.284930408001 343261.6875 3676.0 ENSG00000171320|ENST00000305188|ESCO2;;ENST00000524293.1_1_8:27633031-27634707:+|nuORF 2.4997453689575195 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3682 17.736 800.0 16894.0 25 0 3989.5 -1 0 23 881.3672963289259 2641.0800595869778 3 882.0368530154228 MULTI CID FTMS 0 0 0 3681 22431.32421875 0.2963810804784693 1 -0.0527725219726562 1 2 [EP]AA 4 -1 26.911 0.0 0.0 1.0189 0.0 0.0 0.0 2269.8866751477776 2269.8866751477776 19.921525057367404 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [EP]AA 1.0189 - 18 1 2.264 18942.6 0.4199999868869781 708 2972 3681 DOHH2_400M_050219_2,3682 DOHH2_400M_050219_2,3682, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3683 17.74 238.0 380330.0 25 0 43199.0 + 38228 TPSAKQSL 8 104 416.2319172957141 830.4492816582283 2 416.2312194705009 MULTI CID FTMS 0 0 0 3681 271868.875 0.5629645370942455 -2 0.0632686614990234 2 Unmodified _TPSAKQSL_ ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF 56.17704186161178 0.1143274477948619 2 TPSAKQS{I|L} 8 0 + 86.111 0.0 0.0 10.369 10.369 95.83 0.0 0.0 0.0 68.39025196026356 13.399480616943508 13.399480616943508 11.658656145495256 0 0.4247425010840047 2.0 0.6382104921644451 0.2396518287104437 + + TPSAKQS{I|L};TPSAK[AG]S{I|L} 10.369;8.9653 +;- + 258 + 1 2.264 76739.3 1.0 709 2972 3681 DOHH2_400M_050219_2,3683 DOHH2_400M_050219_2,3683,TPSAKQSL True True TPSAKQSL 17.740042 416.231219470501 1848464.375 3681.0 ENST00000586817.5_1_19:1089487-1094188:-|nuORF;;ENSG00000099817|ENST00000615234|POLR2E 4.306068340937297 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3684 17.744 224.0 353240.0 25 0 38801.0 28164 PPSAKAAID 9 83 435.2397526376213 868.4649523420426 2 435.2393371462822 MULTI CID FTMS 0 0 0 3681 246666.09375 1.0 0 0.0 3 Unmodified _PPSAKAAID_ ENSG00000089280|ENST00000254108|FUS;ENSG00000270647|ENST00000605844|TAF15;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;nc|ENSG00000089280|P35637-2|FUS;nc|ENSG00000270647|Q92804-2|TAF15 13.614867670302877 0.4681447649821485 2 PP 2 7 26.454 0.0 0.0 3.046 0.0 0.0 0.0 671.3388765924436 671.3388765924436 2.7815125038364386 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.0 0.0 + PP 3.046 + + 37 + 1 2.264 65615.3 1.0 710 2972 3681 DOHH2_400M_050219_2,3684 DOHH2_400M_050219_2,3684,PPSAKAAID False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3685 17.752 459.0 434480.0 25 0 31421.0 + 7891 ELNKRGRVL 9 158 362.22469824872 1083.65226534636 3 362.2254211306572 MULTI CID FTMS 0 0 0 3681 156851.390625 0.5073585133573135 -3 0.0735034942626953 4 Unmodified _ELNKRGRVL_ ENSG00000130726|ENST00000253024|TRIM28;ENST00000601150.5_1_19:59059168-59060232:+|nuORF;nc|ENSG00000130726|Q13263-2|TRIM28 58.6788170122104 0.0268135626297836 2 E{I|L}N[RK]RR{I|L} 8 2 + 55.227 0.0 0.0 5.0963 5.0963 72.798 0.0 0.0 0.0 27.1229139922052 11.197887582883936 11.197887582883936 0.4406804435027567 0 0.7614393726401688 1.3979400086720375 0.0 0.4247425010840047 E{I|L}N[RK]RR{I|L};{I|L}EN[RK]RR{I|L};E{I|L}{I|L}{[RE]|[WV]}RR{I|L};{I|L}E{I|L}{[RE]|[WV]}RR{I|L} 5.0963;5.0557;4.8186;4.7779 -;-;-;- 134 + 1 2.264 160483.5 1.0 711 2972 3681 DOHH2_400M_050219_2,3685 DOHH2_400M_050219_2,3685,ELNKRGRVL True True ELNKRGRVL 17.752386 362.225421130657 1140720.75 3681.0 ENST00000601150.5_1_19:59059168-59060232:+|nuORF;;ENSG00000130726|ENST00000253024|TRIM28;;nc|ENSG00000130726|Q13263-2|TRIM28 2.8585044542948403 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3686 17.761 501.0 353840.0 25 0 20131.0 + 35356 STDKQMGY 8 156 465.20532665620766 928.3961003792152 2 465.2057678103447 MULTI CID FTMS 0 0 0 3681 150086.234375 0.0231014278599835 -10 0.2531242370605469 5 Unmodified _STDKQMGY_ ENSG00000084623|ENST00000677711|EIF3I 123.45060196383646 0.0001310626035929 2 {[MG]|[TS]}DKQMGY 8 0 + 63.202 0.0 0.0 6.8077 6.8077 90.862 0.0 0.0 0.0 6.989700043360188 13.448005182016288 6.989700043360188 9.262137858390815 0 2.234636880228201 0.0 0.3054621874040891 0.2887254899964357 + + {[MG]|[TS]}DKQMGY;{[MG]|[TS]}DK[AG]MGY;AAT[C(Carbamidomethyl (C))R]MGY;AAT{[MG]|[TS]}QMGY;{[ES]|[DT]|[{I|L}C]}SKQMGY;{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))R]MGY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}QMGY;AATQM{[MG]|[TS]}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}QM{[MG]|[TS]}GY;AAT[C(Carbamidomethyl (C))R]GMY 6.8077;5.81;5.3591;5.3581;5.2383;5.0045;4.9961;4.9064;4.5445;4.4441 +;-;-;-;-;-;-;-;-;- + 1007 + 1 2.264 138744.3 1.0 712 2972 3681 DOHH2_400M_050219_2,3686 DOHH2_400M_050219_2,3686,STDKQMGY True True STDKQMGY 17.761229 465.205767810345 102776136.0 3681.0 ENSG00000084623|ENST00000677711|EIF3I 7.641326109568278 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3687 17.771 550.0 203850.0 25 0 16240.0 + 39280 VADKSGDVY 9 125 477.2323728740355 952.450192814871 2 477.2319213747978 MULTI CID FTMS 0 0 0 3681 129266.765625 1.0 0 0.0 6 Unmodified _VADKSGDVY_ ENSG00000160193|ENST00000398208|WDR4;nc|ENSG00000160193|P57081-2|WDR4 22.736283301280096 0.2418982879461534 2 VAQA[QP]DDG 9 6 31.084 0.0 0.0 3.2636 0.0 0.0 0.0 68.05139337711171 68.05139337711171 8.125234173745085 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.25 0.0 VAQA[QP]DDG 3.2636 - 429 + 1 2.264 89308.8 1.0 713 2972 3681 DOHH2_400M_050219_2,3687 DOHH2_400M_050219_2,3687,VADKSGDVY False True VADKSGDVY 17.770884 477.231921374798 624770.0 3681.0 ENSG00000160193|ENST00000398208|WDR4;;nc|ENSG00000160193|P57081-2|WDR4 3.642630179723104 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3689 17.775 21.0 2508500.0 25 0 229310.0 + 32725 SEAPSGESRKF 11 70 398.8631985001984 1193.567766100795 3 398.8629943728447 MULTI CID FTMS 0 0 0 3688 2406320.0 0.4610564491035311 3 -0.0862483978271484 1 Unmodified _SEAPSGESRKF_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 17.86316937532769 0.6635724014218961 2 {[ES]|[DT]|[{I|L}C]}APSGE 7 4 43.984 0.0 0.0 3.6851 0.0 0.0 0.0 533.2858370416624 533.2858370416624 43.9840322369416 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}APSGE 3.6851 + + 98 + 1 2.264 48480.1 1.0 714 2973 3688 DOHH2_400M_050219_2,3689 DOHH2_400M_050219_2,3689,SEAPSGESRKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3690 17.777 28.0 1673900.0 25 0 320480.0 + 15945 ITAKDSAKN 9 66 474.2615684201202 946.5085839070404 2 474.2614929080009 MULTI CID FTMS 0 0 0 3688 1405184.375 0.1723806154051492 3 -0.0862483978271484 2 Unmodified _ITAKDSAKN_ REV__ENSG00000108469|ENST00000317905|RECQL5;REV__nc|ENSG00000108469|O94762-2|RECQL5;REV__nc|ENSG00000108469|O94762-3|RECQL5;REV__nc|ENSG00000108469|O94762-4|RECQL5 24.020572477871973 0.2255576514309169 2 [{I|L}T]AGASVSNK 10 -1 + 79.25 0.0 0.0 8.3729 8.3729 89.433 0.0 0.0 0.0 58.28131590713106 11.136218907515314 11.136218907515314 6.53212513775344 0 0.805462187404089 2.0 0.0 0.6861818737241735 [{I|L}T]AGASVSNK;[{I|L}T]AQSVSNK;[{I|L}T]AGASVSGGK;[{I|L}T]QASVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A{[TV]|[{I|L}S]}NSNK;[{I|L}T]QASVSGGK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVSAGA[VP];[{I|L}T]A{[TV]|[{I|L}S]}NSGGK;[{I|L}T]A{[TV]|[{I|L}S]}GGSNK 8.3729;7.6828;7.4047;6.8783;6.7099;5.9174;5.9055;5.0121;4.9446;4.9446 -;-;-;-;-;-;-;-;-;- 215 + 1 2.264 42579.2 1.0 715 2973 3688 DOHH2_400M_050219_2,3690 DOHH2_400M_050219_2,3690,ITAKDSAKN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3691 17.778 61.0 931660.0 25 0 118640.0 + 32727 SEAPSGESRKF 11 57 597.7908902384897 1193.5672275437794 2 597.7911254763603 MULTI CID FTMS 0 0 0 3688 926512.8125 0.3828185686130301 3 -0.0862483978271484 3 Unmodified _SEAPSGESRKF_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 34.221707139014875 0.3014076866608453 2 {[ES]|[DT]|[{I|L}C]}APSGE 7 4 53.231 0.0 0.0 4.4599 0.0 0.0 0.0 533.2840059869749 533.2840059869749 37.03356966489771 0.0 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.0 + {[ES]|[DT]|[{I|L}C]}APSGE 4.4599 + + 51 + 1 2.264 51634.4 1.0 716 2973 3688 DOHH2_400M_050219_2,3691 DOHH2_400M_050219_2,3691,SEAPSGESRKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3692 17.781 127.0 709950.0 25 0 263530.0 + 12358 GTDPTPQHY 9 82 508.2274347197442 1014.4403165062884 2 508.2277099490166 MULTI CID FTMS 0 0 0 3688 541521.3125 1.0 0 0.0 4 Unmodified _GTDPTPQHY_ ENSG00000010810|ENST00000354650|FYN;ENST00000521361.5_1_6:112040873-112041254:-|nuORF;nc|ENSG00000010810|P06241-2|FYN;nc|ENSG00000010810|P06241-3|FYN 56.17704186161178 0.0281986971544335 2 {[SA]|[TG]}DPTPQHY 9 0 + 65.05 0.0 0.0 6.4124 6.4124 90.901 0.0 0.0 0.0 55.24700720996899 11.706962271689749 11.706962271689749 13.015384402724592 0 0.6694451763165201 1.2218487496163564 0.4247425010840047 0.3807196863200844 + + {[SA]|[TG]}DPTPQHY;{[SA]|[TG]}DPTP[AG]HY;{[SA]|[TG]}DP[KS][{M(Oxidation (M))|F}T]Y;{[SA]|[TG]}{[DS]|[MA]|[CV]|TT}[HA]QHY;{[SA]|[TG]}D[RH][W{M(Oxidation (M))|F}]P 6.4124;5.1294;3.4493;2.6058;1.4566 +;-;-;-;- + 280 + 1 2.264 74107.8 1.0 717 2973 3688 DOHH2_400M_050219_2,3692 DOHH2_400M_050219_2,3692,GTDPTPQHY True True GTDPTPQHY 17.78064 508.227709949017 2697802.25 3688.0 ENST00000521361.5_1_6:112040873-112041254:-|nuORF;;nc|ENSG00000010810|P06241-3|FYN;;nc|ENSG00000010810|P06241-2|FYN;;ENSG00000010810|ENST00000354650|FYN 9.752171516418455 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3693 17.785 261.0 293080.0 25 0 16215.0 + 714 AEPDNKNVY 9 99 525.2488377174242 1048.4831225016485 2 525.2477905154228 MULTI CID FTMS 0 0 0 3688 250669.59375 0.8425435035381582 2 -0.0641250610351562 5 Unmodified _AEPDNKNVY_ ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2 36.12702656103203 0.0967173616627612 2 [DP]NKNV{[CP]|[EA]}Y 9 4 + 40.869 0.0 0.0 3.8979 3.8979 79.343 0.0 0.0 0.0 10.501896823007826 7.447274948966935 7.447274948966935 9.208187539523747 0 0.0 1.0 0.3054621874040891 0.5752574989159953 [DP]NKNV{[CP]|[EA]}Y;[DP]NKGGV{[CP]|[EA]}Y;[DP]GGKNV{[CP]|[EA]}Y;YYKNV{[CP]|[EA]}Y;[Y{I|L}][YE]V{[CP]|[EA]}Y;[Y{I|L}]D[Y{I|L}]{[CP]|[EA]}Y;{[CP]|[EA]}PD[KP]MVY;[PG][DG]KNV{[CP]|[EA]}Y;[DP]NK[RP]C(Carbamidomethyl (C))Y;{[QN]|[E{I|L}]|[KN]}[DP]NV{[CP]|[EA]}Y 3.8979;3.0197;3.0197;2.8963;2.7539;2.4668;2.4379;2.1851;2.1572;2.1265 -;-;-;-;-;-;-;-;-;- 504 1 2.264 64237.0 1.0 718 2973 3688 DOHH2_400M_050219_2,3693 DOHH2_400M_050219_2,3693,AEPDNKNVY True True AEPDNKNVY 17.785485 525.247790515423 2716617.25 3688.0 ENSG00000118705|ENST00000237530|RPN2;;nc|ENSG00000118705|P04844-2|RPN2 3.123106002807617 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3694 17.799 800.0 154330.0 25 0 16398.0 + 17512 KPIEPMEKL 9 119 542.8092489135367 1083.6039448938734 2 542.8090698122978 MULTI CID FTMS 0 0 0 3688 161907.328125 1.0 0 0.0 6 Unmodified _KPIEPMEKL_ REV__ENSG00000115008|ENST00000263339|IL1A 24.020572477871973 0.2255576514309169 2 KPTG 4 -1 45.037 0.0 0.0 4.1562 0.0 0.0 0.0 697.3657320611936 697.3657320611936 33.047444008242906 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.0 KPTG 4.1562 - 455 + 1 2.264 98209.3 0.7300000190734863 719 2973 3688 DOHH2_400M_050219_2,3694 DOHH2_400M_050219_2,3694,KPIEPMEKL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3695 17.803 174.0 306650.0 25 0 24808.0 + 32832 SEGKEQRW 8 77 510.2489009089115 1018.483248884623 2 510.2491638064384 MULTI CID FTMS 0 0 0 3688 211920.734375 0.7030051754065146 -2 0.0815067291259765 7 Unmodified _SEGKEQRW_ ENSG00000084090|ENST00000337288|STARD7;ENST00000462501.1_1_2:96858901-96861247:-|nuORF;ENST00000488084.1_1_2:96861046-96873890:-|nuORF 36.12702656103203 0.299085846329477 2 {[ES]|[DT]|[{I|L}C]}GKEQRW 8 0 {[ES]|[DT]|[{I|L}C]} + + 32.243 3.7236 1.7233 3.1658 3.1658 49.201 0.0 0.0 0.0 0.0 12.77874522074665 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.3807196863200844 + + {[ES]|[DT]|[{I|L}C]}GKEQRW 3.1658 + + 138 + 1 2.264 44060.4 1.0 720 2973 3688 DOHH2_400M_050219_2,3695 DOHH2_400M_050219_2,3695,SEGKEQRW False True SEGKEQRW 17.802696 510.249163806438 1536560.625 3688.0 ENST00000488084.1_1_2:96861046-96873890:-|nuORF;;ENST00000462501.1_1_2:96858901-96861247:-|nuORF;;ENSG00000084090|ENST00000337288|STARD7 5.750193436940511 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3697 17.812 328.0 308340.0 25 0 47077.0 -1 0 87 516.2613179358382 515.2540414692381 1 516.2615844607353 MULTI CID FTMS 0 0 0 3696 197351.671875 0.6416992346862568 -11 0.3062915802001953 1 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PR 4 -1 + 18.188 0.0 0.0 3.5298 3.5298 69.814 0.0 0.0 0.0 2.703037561203842 2.403626894942441 2.403626894942441 2.403626894942441 0 0.5 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RP;[HM]TK 3.5298;3.0633;1.5662 -;-;- 31 + 1 2.246 80936.5 1.0 721 2974 3696 DOHH2_400M_050219_2,3697 DOHH2_400M_050219_2,3697, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3698 17.813 25.0 1711900.0 25 0 404340.0 31390 RPATPAPAP 9 65 439.2482764748561 876.4820000165122 2 439.2478820681572 MULTI CID FTMS 0 0 0 3696 1567821.125 0.5596560881501791 -3 0.1133041381835937 2 Unmodified _RPATPAPAP_ ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000095539|Q9NTN9|SEMA4G 18.1463463914782 0.3454829746528889 2 WAP 3 7 31.995 0.0 0.0 3.6504 0.0 0.0 504.2843189923844 0.0 504.2843189923844 0.0 6.052659518797938 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 WAP 3.6504 - 57 1 2.246 41306.6 1.0 722 2974 3696 DOHH2_400M_050219_2,3698 DOHH2_400M_050219_2,3698,RPATPAPAP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3699 17.827 800.0 206890.0 25 0 11740.0 -1 0 77 628.7849393603208 2511.110651574883 4 629.0360595583916 MULTI CID FTMS 0 0 0 3696 147831.8125 0.4789274641167701 -10 0.302398681640625 3 2 DD 2 -1 24.024 0.0 0.0 0.9567 0.0 0.0 744.3299075339961 1533.7027357229608 2278.032643256957 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3054621874040891 0.0 DD 0.9567 - 15 + 1 2.246 126651.8 0.6399999856948853 723 2974 3696 DOHH2_400M_050219_2,3699 DOHH2_400M_050219_2,3699, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3700 17.835 438.0 118530.0 25 0 41094.0 + 42543 VTNAEVDR 8 76 452.2303427953388 0 452.2303649783134 PEAK CID FTMS 0 0 0 3696 85051.40625 0.952869186065849 -3 0.1133041381835937 4 Unmodified _VTNAEVDR_ REV__ENSG00000091428|ENST00000397081|RAPGEF4;REV__nc|ENSG00000091428|Q8WZA2-2|RAPGEF4;REV__nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;REV__nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;REV__nc|ENSG00000091428|Q8WZA2-5|RAPGEF4 5.230669730166228 0.5807325378471833 2 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.51018 0.0 0.0 469.23064798472006 283.1195467584594 752.3501947431795 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.51018 - 9 + 1 2.246 44578.9 1.0 724 2974 3696 DOHH2_400M_050219_2,3700 DOHH2_400M_050219_2,3700,VTNAEVDR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3702 17.839 5.6 6933800.0 25 0 718490.0 + 35503 STMSTNGIPR 10 66 540.2609248184638 1078.5072967037274 2 540.2612182497978 MULTI CID FTMS 0 0 0 3701 9730386.0 0.8665177467015303 1 -0.0221233367919921 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 61.60191391372663 0.0323840705564037 2 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 76.503 0.0 0.0 7.0934 7.0934 80.043 0.0 0.0 0.0 7.269987279362624 0.5799194697768684 0.5799194697768684 0.5799194697768684 0 0.8807196863200843 0.0 0.8494850021680094 0.3494850021680094 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;[HD]T{[QV]|[N{I|L}]|[RA]|[KV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HV] 7.0934;7.0396;6.2436;6.1899;0.20117 -;+;-;-;- + 130 + 1 2.246 33613.0 1.0 725 2975 3701 DOHH2_400M_050219_2,3702 DOHH2_400M_050219_2,3702,STMSTNGIPR True False STMSTNGIPR 17.839481 540.261218249798 332960291.5 3701.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 11.00013542175293 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3703 17.842 126.0 596010.0 25 0 71470.0 + 17590 KPTAAFHLL 9 79 499.29295336604406 996.571353798888 2 499.2930175662041 MULTI CID FTMS 0 0 0 3701 454794.46875 0.0029495622658221 -10 0.2901535034179687 2 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 2 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3538604590931 667.3538604590931 18.723637474483468 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 68 + 1 2.246 61334.8 1.0 726 2975 3701 DOHH2_400M_050219_2,3703 DOHH2_400M_050219_2,3703,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3704 17.846 214.0 304110.0 25 0 22094.0 -1 0 98 367.1938114623647 366.1865349957647 1 367.1969482302666 MULTI CID FTMS 0 0 0 3701 122103.6328125 1.0 0 0.0 3 2 A{I|L} 2 -1 16.198 0.0 0.0 4.4234 0.0 0.0 164.05407147213032 0.0 164.05407147213032 0.0 1.7609125905568117 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L} 4.4234 - 12 + 1 2.246 56047.6 1.0 727 2975 3701 DOHH2_400M_050219_2,3704 DOHH2_400M_050219_2,3704, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3705 17.857 613.0 125250.0 25 0 6550.1 + + 1981 ANKDRPAL 8 125 442.7510361837639 883.4875194343279 2 442.7505370974541 MULTI CID FTMS 0 0 0 3701 92427.3515625 1.0 0 0.0 4 Unmodified _ANKEPRLG_ nc|ENSG00000169062|Q9H1J1-3|UPF3A;nc|ENSG00000169062|Q9H1J1-2|UPF3A;ENSG00000169062|ENST00000375299|UPF3A 36.12702656103203 0.299085846329477 2 ANKKG 5 -1 53.43 0.0 0.0 6.0476 0.0 0.0 0.0 382.1799410455688 382.1799410455688 38.7146938501479 0.0 0.0 0.0 0 0.8252574989159953 0.5228787452803376 0.0 0.8494850021680094 ANKKG 6.0476 - 188 + 1 2.246 63873.1 1.0 728 2975 3701 DOHH2_400M_050219_2,3705 DOHH2_400M_050219_2,3705,ANKEPRLG False False ANKDRPAL 17.857125 442.750537097454 587444.0625 3701.0 nc|ENSG00000169062|Q9H1J1-3|UPF3A;;nc|ENSG00000169062|Q9H1J1-2|UPF3A;;ENSG00000169062|ENST00000375299|UPF3A 1.1541707168022792 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3707 17.862 23.0 1657400.0 25 0 405320.0 36649 TATVLYNP 8 61 439.7358721219064 877.4571913106129 2 439.7360412478447 MULTI CID FTMS 0 0 0 3706 511766.1875 0.4839586494410892 5 -0.0752716064453125 1 Unmodified _TATVLYNP_ ENSG00000123191|ENST00000242839|ATP7B;nc|ENSG00000123191|P35670-2|ATP7B;nc|ENSG00000123191|P35670-3|ATP7B;nc|ENSG00000123191|P35670-4|ATP7B 9.347437153973935 0.7675937258251505 2 [VS][HA][{I|L}P]TGP 9 6 [VS][HA][{I|L}P]T + + 20.969 -3.2492 -0.46063 2.3898 2.3898 47.907 0.0 0.0 0.0 0.0 -2.498774732165998 -2.498774732165998 0.0 0 0.0 0.0 0.0 0.0 [VS][HA][{I|L}P]TGP 2.3898 - 29 + 1 2.246 37119.3 1.0 729 2976 3706 DOHH2_400M_050219_2,3707 DOHH2_400M_050219_2,3707,TATVLYNP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3708 17.866 257.0 263420.0 25 0 19206.0 + 7186 EEQAVRPKY 9 83 560.2930780081784 1118.5716030831568 2 560.2932006716728 MULTI CID FTMS 0 0 0 3706 323304.3125 0.2178709497426 5 -0.0752716064453125 2 Unmodified _EEQAVRPKY_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 92.65332237495696 0.0139087009896299 2 EEQAVR[KP]Y 9 0 + 67.528 0.0 0.0 6.0369 6.0369 87.543 0.0 0.0 0.0 5.990990843429316 5.990990843429316 5.990990843429316 9.208187539523747 0 1.7416440611282624 1.6989700043360187 0.0 0.4247425010840047 + + EEQAVR[KP]Y;EE[AG]AVR[KP]Y;[AG]EEAVR[KP]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EAVR[KP]Y;[QA]EEVR[KP]Y;[KP]RVAQEEY;[KP]RVA[AG]EEY;[KP]RVA[YE]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RK][YR][HC] 6.0369;5.2137;4.3052;3.4048;2.1673;1.857;1.0338;0.25027;0.088038 +;-;-;-;-;-;-;-;- + 155 + 1 2.246 56671.6 1.0 730 2976 3706 DOHH2_400M_050219_2,3708 DOHH2_400M_050219_2,3708,EEQAVRPKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3709 17.868 76.0 817560.0 25 0 168270.0 -1 STDKQMGY 8 83 473.2026409631485 944.390728993097 2 473.2026855349541 MULTI CID FTMS 0 0 0 3706 391971.21875 0.4300158202862654 -7 0.2125244140625 3 Oxidation (M) _STDKQM(Oxidation (M))GY_ ENSG00000084623|ENST00000677711|EIF3I 13.50788311687929 0.7113601687236069 2 AGTRS{[QN]|[E{I|L}]|[KN]} 7 -1 20.17 0.0 0.0 2.1357 0.0 0.0 212.0167798737595 0.0 212.0167798737595 0.0 6.190257421222398 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 AGTRS{[QN]|[E{I|L}]|[KN]} 2.1357 - 211 + 1 2.246 56977.3 1.0 731 2976 3706 DOHH2_400M_050219_2,3709 DOHH2_400M_050219_2,3709,STDKQMGY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3710 17.882 800.0 109580.0 25 0 27225.0 -1 0 45 578.4894670001481 2887.4109526677403 5 578.6906616091728 MULTI CID FTMS 0 0 0 3706 66696.203125 0.2587289628310517 9 -0.2140560150146484 4 2 W 1 -1 15.485 0.0 0.0 0.53628 0.0 0.0 2683.32042029645 0.0 2683.32042029645 0.0 13.89075625191822 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.53628 - 4 + 1 2.246 71319.2 0.4799999892711639 732 2976 3706 DOHH2_400M_050219_2,3710 DOHH2_400M_050219_2,3710, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3712 17.891 287.0 272280.0 25 0 36381.0 -1 0 56 575.2899227974052 2871.413231654026 5 575.2877075076103 MULTI CID FTMS 0 0 0 3711 174298.375 0.3255500069691324 13 -0.3172740936279297 1 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Q 4 -1 25.662 0.0 0.0 0.8937 0.0 0.0 0.0 2383.15841533006 2383.15841533006 13.922815857436532 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Q 0.8937 - 48 1 2.23 70349.5 1.0 733 2977 3711 DOHH2_400M_050219_2,3712 DOHH2_400M_050219_2,3712, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3716 17.905 201.0 639320.0 25 0 66453.0 + 1343 AKPSRNPP 8 94 433.7457279058736 865.4769028785472 2 433.7455016970634 MULTI CID FTMS 0 0 0 3715 281444.5 0.0356109249797458 -6 0.0959701538085937 1 Unmodified _AKPSRNPP_ REV__ENST00000508652.5_1_4:164415907-164436651:+|nuORF 11.640296217721598 0.738950129755968 2 [VG]PTP 5 -1 32.676 0.0 0.0 3.7755 0.0 0.0 0.0 411.2004488580688 411.2004488580688 2.0977840558430927 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [VG]PTP 3.7755 - 222 + 1 2.23 106331.2 1.0 734 2980 3715 DOHH2_400M_050219_2,3716 DOHH2_400M_050219_2,3716,AKPSRNPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3717 17.919 800.0 114650.0 25 0 40238.0 + 35352 STDKQMGY 8 47 945.3981810388226 944.3909045722226 1 945.3983032107352 MULTI CID FTMS 0 0 0 3715 117344.484375 0.6662478469062518 -4 0.0415191650390625 2 Oxidation (M) _STDKQM(Oxidation (M))GY_ ENSG00000084623|ENST00000677711|EIF3I 47.74868867922204 0.1498366402366518 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}Q{M(Oxidation (M))|F}GY 8 3 + 58.549 0.0 0.0 6.1997 6.1997 82.271 0.0 0.0 0.0 4.490152339223741 7.940680443502757 4.490152339223741 4.490152339223741 0 0.7742275032520141 0.0 1.2302046884880935 0.6109243748081782 {[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}Q{M(Oxidation (M))|F}GY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RQ{M(Oxidation (M))|F}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}[AG]{M(Oxidation (M))|F}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}C(Carbamidomethyl (C))R{M(Oxidation (M))|F}GY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R[AG]{M(Oxidation (M))|F}GY;[MN]G[NP]R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[MG]|[TS]}DK[HT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[MN]GTR{M(Oxidation (M))|F}GY;[MN][HM]R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}[NP]{[{M(Oxidation (M))|F}H]|[RQ]} 6.1997;5.7242;5.2189;4.9118;4.7362;2.5023;2.2166;1.9371;1.8236;1.7649 -;-;-;-;-;-;-;-;-;- 199 1 2.23 64639.5 0.6000000238418579 735 2980 3715 DOHH2_400M_050219_2,3717 DOHH2_400M_050219_2,3717,STDKQMGY False False STDKQMGY 17.918554 945.398303210735 9495737.0 3715.0 ENSG00000084623|ENST00000677711|EIF3I 8.282934188842773 1.0 True 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3718 17.932 800.0 69121.0 25 0 4188.0 -1 0 48 838.0445517413809 2511.1118258243428 3 838.3785278201103 MULTI CID FTMS 0 0 0 3715 82295.90625 1.0 0 0.0 3 2 DD 2 -1 23.711 0.0 0.0 0.94426 0.0 0.0 744.3320475840591 1533.6992833515246 2278.031330935584 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 DD 0.94426 - 9 + 1 2.23 46756.4 0.5899999737739563 736 2980 3715 DOHH2_400M_050219_2,3718 DOHH2_400M_050219_2,3718, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3720 17.948 800.0 68333.0 25 0 8412.7 -1 QSDPTQSGMY 10 108 565.226316530667 1128.4380801281338 2 565.2268554568291 MULTI CID FTMS 0 0 0 3719 126132.125 0.6587547121925982 8 -0.2397632598876953 1 Oxidation (M) _QSDPTQSGM(Oxidation (M))Y_ ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1 31.26834338654808 0.266153677697784 2 [WC(Carbamidomethyl (C))]GSQ[TP]MY 9 -1 + 26.449 0.0 0.0 2.3438 2.3438 76.372 0.0 0.0 0.0 3.489853770435335 9.41967233177959 3.489853770435335 9.208187539523752 0 0.0 0.0 0.3807196863200844 0.0 [WC(Carbamidomethyl (C))]GSQ[TP]MY;[WC(Carbamidomethyl (C))]GS[AG][TP]MY;[WC(Carbamidomethyl (C))]GS{[ET]|[MV]}SG[{M(Oxidation (M))|F}V];[WC(Carbamidomethyl (C))]GS{[ET]|[MV]}{[CT]|[{M(Oxidation (M))|F}G]}W;[WC(Carbamidomethyl (C))]G[WM]{[CT]|[{M(Oxidation (M))|F}G]}W;[WC(Carbamidomethyl (C))]GS[RH][CS]H 2.3438;1.5278;1.4311;1.3452;0.77113;0.35218 -;-;-;-;-;- 288 + 1 2.23 46340.3 0.6499999761581421 737 2981 3719 DOHH2_400M_050219_2,3720 DOHH2_400M_050219_2,3720,QSDPTQSGMY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3721 17.962 800.0 109970.0 25 0 6509.7 -1 NTKDYMCTE 9 133 581.2314244487063 1160.4482959642123 2 581.2303344607353 MULTI CID FTMS 0 0 0 3719 101858.4453125 0.3020985498117741 -3 0.0415859222412109 2 Carbamidomethyl (C) _NTKDYMC(Carbamidomethyl (C))TE_ ENSG00000115568|ENST00000411696|ZNF142;ENST00000433921.5_1_2:219503064-219516433:-|nuORF;nc|ENSG00000115568|P52746|ZNF142 18.1463463914782 0.3454829746528889 2 {[QS]|[NT]}V[SG]AVE 8 -1 66.019 0.0 0.0 5.6891 0.0 0.0 0.0 400.0637494156376 400.0637494156376 49.02885054762624 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 1.1883753548010496 1.7034021960761263 {[QS]|[NT]}V[SG]AVE 5.6891 - 2000 1 2.23 71534.6 0.550000011920929 738 2981 3719 DOHH2_400M_050219_2,3721 DOHH2_400M_050219_2,3721,NTKDYMCTE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3722 17.965 131.0 504850.0 25 0 80593.0 + -1 LTGWPLTMK 9 90 531.7864961422808 1061.5584393513616 2 531.7844726443291 MULTI CID FTMS 0 0 0 3719 329701.1875 0.6414264001361835 9 -0.2668323516845703 3 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 24.020572477871973 0.2255576514309169 2 [NS][KQ][{I|L}P]T{M(Oxidation (M))|F}Q 9 -1 + 33.847 0.0 0.0 3.1884 3.1884 66.205 0.0 0.0 0.0 0.4845500650402812 4.720608105260219 0.4845500650402812 0.4845500650402812 0 1.1237125054200234 1.0969100130080565 0.4247425010840047 0.0 [NS][KQ][{I|L}P]T{M(Oxidation (M))|F}Q;[KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}Q;[RH]TH{[TV]|[{I|L}S]}[PS]K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]HT{M(Oxidation (M))|F}Q;[NS][KQ][{I|L}P]R[YG];[NS][KQ][{I|L}P]GV[YG];[KT]T{[TV]|[{I|L}S]}HR[YG];[KP][MT][{I|L}P]T{M(Oxidation (M))|F}Q;[KT]T{[TV]|[{I|L}S]}HGV[YG];{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}P]T{M(Oxidation (M))|F}Q 3.1884;3.1428;2.6437;2.0831;1.8463;1.8032;1.8007;1.7803;1.7576;1.588 -;-;-;-;-;-;-;-;-;- 368 1 2.23 54462.7 1.0 739 2981 3719 DOHH2_400M_050219_2,3722 DOHH2_400M_050219_2,3722,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3723 17.979 800.0 206700.0 25 0 12658.0 + 4742 DEGSGEGHKW 10 139 551.2329602269436 1100.4513675206872 2 551.2333862185478 MULTI CID FTMS 0 0 0 3719 162722.796875 0.4271346295361624 -4 0.0504417419433593 4 Unmodified _DEGSGEGHKW_ ENSG00000170242|ENST00000527733|USP47;ENST00000531513.5_1_11:11964592-11970195:+|nuORF;nc|ENSG00000170242|Q96K76-2|USP47;nc|ENSG00000170242|Q96K76|USP47 103.82355648334676 0.0065995892596364 2 DEGSGEGHKW 10 0 + 101.97 0.0 0.0 9.2659 9.2659 95.509 0.0 0.0 0.0 35.02697515943353 12.263748473171717 12.263748473171717 12.263748473171717 0 1.6549471895720984 2.0 1.4361818737241734 0.2742275032520141 + + DEGSGEGHKW;DEGSGEGHWK;DEGSG[HV]QSW;DEGE[SG]GHKW;DADSGEGHKW;DEG{M(Oxidation (M))|F}GVEYW;DEG{M(Oxidation (M))|F}REYW;DEGSG[HV][AG]SW;DE[NS]EGHKW;DEGE[SG]GHWK 9.2659;8.1515;7.602;7.5053;7.2605;7.1185;7.0769;6.7692;6.5964;6.3908 +;-;-;-;-;-;-;-;-;- + 4983 + 1 2.23 124447.7 0.699999988079071 740 2981 3719 DOHH2_400M_050219_2,3723 DOHH2_400M_050219_2,3723,DEGSGEGHKW True True DEGSGEGHKW 17.978805 551.233386218548 1678703.5 3719.0 ENSG00000170242|ENST00000527733|USP47;;ENST00000531513.5_1_11:11964592-11970195:+|nuORF;;nc|ENSG00000170242|Q96K76|USP47;;nc|ENSG00000170242|Q96K76-2|USP47 8.026372591654459 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3725 17.984 64.0 776620.0 25 0 60648.0 + 28332 PSAHCPASTV 10 87 485.2264838932184 968.4384148532368 2 485.2267028689384 MULTI CID FTMS 0 0 0 3724 850852.3125 0.3649763544565568 8 -0.2205772399902343 1 Unmodified _PSAHCPASTV_ REV__ENST00000295404.9_1_19:50194996-50204826:+|nuORF 27.628801355627647 0.3479284626772844 2 SPA{M(Oxidation (M))|F}PHNS{I|L} 9 -1 + 65.704 0.0 0.0 6.7845 6.7845 94.684 0.0 0.0 0.0 28.721544054770263 4.59183145787911 4.59183145787911 31.95046257204389 0 2.0924778212679485 2.0 0.4247425010840047 0.0 SPA{M(Oxidation (M))|F}PHNS{I|L};SP[WE]HNS{I|L};[PS][PG]{M(Oxidation (M))|F}[HQ]S{I|L};[PS]A[RH][TA]DD;S[WE]PHNS{I|L};[PS][{M(Oxidation (M))|F}T][KC]{[WT]|[RM]};[PS][{M(Oxidation (M))|F}T]{[CT]|[{M(Oxidation (M))|F}G]}[WK];[{M(Oxidation (M))|F}T][PG]PHNS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[MT]{[{M(Oxidation (M))|F}H]|[RQ]}S{I|L};[PA]S[RH][TA]DD 6.7845;3.4854;3.4383;3.2954;2.5305;2.2874;1.9766;1.0814;0.79726;0.70987 -;-;-;-;-;-;-;-;-;- 473 + 1 2.204 43382.6 1.0 741 2982 3724 DOHH2_400M_050219_2,3725 DOHH2_400M_050219_2,3725,PSAHCPASTV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3726 17.988 218.0 390440.0 25 0 37632.0 -1 ALDAWMFPL 9 94 360.512375022435 1078.515295667505 3 360.5124694705009 MULTI CID FTMS 0 0 0 3724 296961.09375 0.4877482868573829 -3 0.08392333984375 2 Oxidation (M) _ALDAWM(Oxidation (M))FPL_ ENSG00000146070|ENST00000274793|PLA2G7;ENSG00000158006|ENST00000374282|PAFAH2 13.042465956692816 0.4836390050082244 2 VMP{I|L} 4 -1 25.394 0.0 0.0 2.3545 0.0 0.0 620.2446485501206 0.0 620.2446485501206 0.0 15.01520924083433 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 VMP{I|L} 2.3545 - 61 + 1 2.204 77448.6 1.0 742 2982 3724 DOHH2_400M_050219_2,3726 DOHH2_400M_050219_2,3726,ALDAWMFPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3727 17.993 276.0 187810.0 25 0 21475.0 + 32528 SALRKQSL 8 78 451.77485911110057 901.5351652890012 2 451.7751342654228 MULTI CID FTMS 0 0 0 3724 143756.25 0.7012635762917971 -1 0.0462551116943359 3 Unmodified _SALRKQSL_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 36.506200033944 0.2927422953263032 2 {[SA]|[TG]}{I|L}RKQS{I|L} 8 0 + 61.978 0.0 0.0 6.8747 6.8747 91.053 0.0 0.0 0.0 27.548181095651856 32.228408191691344 27.548181095651856 9.262137858390815 0 1.4876954943324543 2.0 0.4247425010840047 0.0 + + {[SA]|[TG]}{I|L}RKQS{I|L};{[SA]|[TG]}{I|L}RK[AG]S{I|L} 6.8747;5.8473 +;- + 37 1 2.204 45511.1 1.0 743 2982 3724 DOHH2_400M_050219_2,3727 DOHH2_400M_050219_2,3727,SALRKQSL False True SALRKQSL 17.992951 451.775134265423 847941.6875 3724.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 3.743366877237956 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3728 18.002 527.0 186150.0 25 0 13937.0 + 32970 SEMAGPPQM 9 116 482.1992011745734 962.3838494159468 2 482.2002136111259 MULTI CID FTMS 0 0 0 3724 86990.671875 0.733984779520578 -3 0.08392333984375 4 Oxidation (M) _SEMAGPPQM(Oxidation (M))_ ENSG00000174231|ENST00000304992|PRPF8 46.020951573049366 0.0490941689151868 2 [{M(Oxidation (M))|F}E]AAGPPQ{M(Oxidation (M))|F} 9 2 [{M(Oxidation (M))|F}E]AA + + 33.391 14.587 3.4884 3.4696 3.4696 50.069 0.0 0.0 0.0 0.0 19.032125137753432 0.0 0.0 0 0.25 0.0 0.0 0.8494850021680094 [{M(Oxidation (M))|F}E]AAGPPQ{M(Oxidation (M))|F} 3.4696 - 258 + 1 2.204 80858.7 1.0 744 2982 3724 DOHH2_400M_050219_2,3728 DOHH2_400M_050219_2,3728,SEMAGPPQM True False SEMAGPPQM 18.00222 482.200213611126 616215.5625 3724.0 ENSG00000174231|ENST00000304992|PRPF8 7.738476435343425 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3729 18.015 712.0 343800.0 25 0 36233.0 -1 0 220 358.06385976158106 357.05658329498107 1 358.0668517947197 MULTI CID FTMS 0 0 0 3724 108536.75 0.844291735779978 -2 0.0800075531005859 5 2 V 1 -1 10.713 0.0 0.0 3.0005 0.0 0.0 239.9769533284756 0.0 239.9769533284756 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 V 3.0005 - 29 + 1 2.204 187423.9 1.0 745 2982 3724 DOHH2_400M_050219_2,3729 DOHH2_400M_050219_2,3729, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3731 18.019 11.0 3282400.0 25 0 277300.0 + 35357 STDKQMGY 8 58 465.20532665620766 928.3961003792152 2 465.2053710818291 MULTI CID FTMS 0 0 0 3730 5810868.0 0.8944147907028004 1 -0.024911880493164 1 Unmodified _STDKQMGY_ ENSG00000084623|ENST00000677711|EIF3I 54.773552608820026 0.1167943196628344 2 {[MG]|[TS]}DKQMGY 8 0 + 54.641 0.0 0.0 5.8856 5.8856 87.874 0.0 0.0 0.0 24.407818218340367 16.40978057358332 16.40978057358332 9.262137858390815 0 1.3494850021680094 0.0 0.0 0.0 + + {[MG]|[TS]}DKQMGY;{[MG]|[TS]}DK[AG]MGY;{[MG]|[TS]}DK[C(Carbamidomethyl (C))R]Y;{[MG]|[TS]}[HT]MQQP;{[MG]|[TS]}D{[HG]|PP}{[MG]|[TS]}QP;{[MG]|[TS]}D{[HG]|PP}[C(Carbamidomethyl (C))R]P;{[MG]|[TS]}[HT]MQ[AG]P;{[MG]|[TS]}[HT]M[AG]QP;{[MG]|[TS]}D{[VA]|[{I|L}G]}[DP]QP;{[MG]|[TS]}[HT]M[NP]AA 5.8856;4.8879;3.2854;3.2174;2.8943;2.5208;2.2197;2.2197;2.0301;0.41992 +;-;-;-;-;-;-;-;-;- + 177 + 1 2.204 34084.9 1.0 746 2983 3730 DOHH2_400M_050219_2,3731 DOHH2_400M_050219_2,3731,STDKQMGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3732 18.023 203.0 345510.0 25 0 34163.0 + 1992 ANYKKHVDL 9 104 363.2014862396325 1086.5826293190976 3 363.2014037966728 MULTI CID FTMS 0 0 0 3730 221483.34375 0.1348700708494096 -6 0.1323585510253906 2 Unmodified _ANYKKHVDL_ REV__ENSG00000055130|ENST00000325222|CUL1 21.74664581756881 0.2544899275067181 2 AH[KC]{I|L} 5 -1 25.744 0.0 0.0 2.3693 0.0 0.0 516.2702503888687 0.0 516.2702503888687 0.0 14.775071725447404 0.0 0.0 0 0.75 0.0 0.0 0.3807196863200844 AH[KC]{I|L} 2.3693 - 164 1 2.204 61794.1 1.0 747 2983 3730 DOHH2_400M_050219_2,3732 DOHH2_400M_050219_2,3732,ANYKKHVDL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3733 18.037 800.0 162290.0 25 0 18604.0 + 6308 DVHKKYNAL 9 121 544.2978464439357 1086.5811399546712 2 544.2977172732353 MULTI CID FTMS 0 0 0 3730 107498.6796875 0.1887595464666961 -4 0.1195850372314453 3 Unmodified _DVHKKYNAL_ ENSG00000055130|ENST00000325222|CUL1 86.33184430468982 0.0159826143231117 2 [DV]HKKYNA{I|L} 9 0 + 72.991 0.0 0.0 6.7175 6.7175 78.149 0.0 0.0 0.0 0.1722032235195314 0.1722032235195314 0.1722032235195314 0.1722032235195314 0 1.5994850021680094 2.0 0.4247425010840047 0.75 + + [DV]HKKYNA{I|L};DVHKKYNA{I|L};[DV]HKKYGGA{I|L};DVHKKK[MT]T;DVH[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H{I|L};[HV]DKKYNA{I|L};{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}KKYNA{I|L};[HV]DKKYGGA{I|L};{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}KKYGGA{I|L};[HK][DV]KYNA{I|L} 6.7175;6.7017;5.8701;5.7591;4.9468;4.8088;4.1397;3.9613;3.2922;3.0175 +;+;-;-;-;-;-;-;-;- + 653 1 2.204 102490.9 0.6399999856948853 748 2983 3730 DOHH2_400M_050219_2,3733 DOHH2_400M_050219_2,3733,DVHKKYNAL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3734 18.04 133.0 576770.0 25 0 301830.0 -1 0 66 488.2678344109858 487.2605579443859 1 488.2677184939384 MULTI CID FTMS 0 0 0 3730 499243.875 0.4186643792537829 -145 2.5383405685424805 4 2 P 1 -1 10.837 0.0 0.0 2.2242 0.0 0.0 372.19634698422806 0.0 372.19634698422806 0.0 1.3735052847081608 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.2242 - 8 + 1 2.204 69474.3 1.0 749 2983 3730 DOHH2_400M_050219_2,3734 DOHH2_400M_050219_2,3734, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3736 18.055 800.0 201930.0 25 0 15752.0 17483 KPGDRVQVVG 10 127 527.803488292991 1053.592423652782 2 527.8052245974541 MULTI CID FTMS 0 0 0 3735 139941.21875 0.4801782681465943 -4 0.1405811309814453 1 Unmodified _KPGDRVQVVG_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 19.361941925380144 0.5226674314761524 2 KPTGG 5 7 47.206 0.0 0.0 4.4805 0.0 0.0 0.0 610.3344820611936 610.3344820611936 21.90314962827124 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 KPTGG 4.4805 - 1241 + 1 2.204 125661.0 0.8100000023841858 750 2984 3735 DOHH2_400M_050219_2,3736 DOHH2_400M_050219_2,3736,KPGDRVQVVG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3737 18.058 134.0 559050.0 25 0 245630.0 + 13573 HPKYKTEL 8 62 508.2807969839682 1014.5470410347364 2 508.2801391482353 MULTI CID FTMS 0 0 0 3735 99759.359375 1.0 0 0.0 2 Unmodified _HPKYKTEL_ ENSG00000128016|ENST00000597629|ZFP36;ENSG00000152518|ENST00000282388|ZFP36L2;ENSG00000185650|ENST00000439696|ZFP36L1;ENST00000555997.1_1_14:69256252-69257717:-|nuORF 17.11289562659939 0.6581031263288403 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]YKC{I|L} 8 4 + 32.44 0.0 0.0 3.1975 3.1975 79.656 0.0 0.0 0.0 2.007046801327732 16.33085333508717 2.007046801327732 13.750612633916996 0 0.0 0.0 0.3054621874040891 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]YKC{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H{I|L};[KP][{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{I|L} 3.1975;1.8422;0.10768 -;-;- 67 1 2.204 64087.7 1.0 751 2984 3735 DOHH2_400M_050219_2,3737 DOHH2_400M_050219_2,3737,HPKYKTEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3738 18.064 314.0 183210.0 25 0 38487.0 -1 KPFRQPCY 8 66 548.2760431871183 1094.5375334410364 2 548.2772094607353 MULTI CID FTMS 0 0 0 3735 138036.875 0.4865378148502208 -3 0.1068286895751953 3 Carbamidomethyl (C) _KPFRQPC(Carbamidomethyl (C))Y_ ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3 9.347437153973935 0.7675937258251505 2 KPT 3 -1 24.693 0.0 0.0 2.256 0.0 0.0 97.964192109541 667.3573092096311 765.3215013191722 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 KPT 2.256 - 14 + 1 2.204 50251.3 1.0 752 2984 3735 DOHH2_400M_050219_2,3738 DOHH2_400M_050219_2,3738,KPFRQPCY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3739 18.071 436.0 296650.0 25 0 30737.0 + 623 AEKVEQKVY 9 153 365.2011675162337 1092.581673148901 3 365.2003661990166 MULTI CID FTMS 0 0 0 3735 132086.15625 0.8517191075638798 -2 0.0605735778808593 4 Unmodified _AEKVEQKVY_ REV__ENSG00000250298|ENST00000638719|GIMD1 14.40537977576856 0.4467465336100671 2 [KQ][NS]V[KQ]VY 9 -1 [KQ][NS]V[KQ]V + + 14.604 4.7101 0.51674 1.3367 1.3367 46.986 0.0 0.0 0.0 0.0 -3.5738654550162643 -3.5738654550162643 0.0 0 0.0 0.0 0.0 0.0 [KQ][NS]V[KQ]VY 1.3367 - 146 + 1 2.204 107072.5 1.0 753 2984 3735 DOHH2_400M_050219_2,3739 DOHH2_400M_050219_2,3739,AEKVEQKVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3741 18.077 105.0 466890.0 25 0 132560.0 2715 ATFKSRAP 8 79 439.2482764748561 876.4820000165122 2 439.2480041384697 MULTI CID FTMS 0 0 0 3740 620402.0625 0.2214613554075264 8 -0.2047843933105468 1 Unmodified _ATFKSRAP_ ENSG00000079432|ENST00000681038|CIC 16.942295170755138 0.6606234159769251 2 AP 2 6 30.217 0.0 0.0 3.4475 0.0 0.0 690.3809695983466 0.0 690.3809695983466 0.0 22.76925019195368 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + AP 3.4475 + + 31 + 1 2.173 45733.2 1.0 754 2985 3740 DOHH2_400M_050219_2,3741 DOHH2_400M_050219_2,3741,ATFKSRAP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3742 18.088 653.0 296210.0 25 0 16516.0 -1 0 76 628.7849393603208 2511.110651574883 4 629.0350829958916 MULTI CID FTMS 0 0 0 3740 188186.921875 0.6096650223613709 1 -0.0169010162353515 2 2 DD 2 -1 24.776 0.0 0.0 0.98667 0.0 0.0 744.3276921502662 1533.7036909560566 2278.0313831063227 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 DD 0.98667 - 25 + 1 2.173 145285.9 1.0 755 2985 3740 DOHH2_400M_050219_2,3742 DOHH2_400M_050219_2,3742, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3744 18.093 145.0 1204600.0 25 0 243640.0 + 17556 KPPPGGSR 8 132 398.2277206232517 794.4408883133035 2 398.2270690798759 MULTI CID FTMS 0 0 0 3743 408921.40625 0.8638430487373604 1 -0.0425376892089843 1 Unmodified _KPPPGGSR_ REV__ENSG00000147274|ENST00000320676|RBMX;REV__ENSG00000169800|ENST00000303766|RBMY1F;REV__ENSG00000226941|ENST00000250831|RBMY1J;REV__ENSG00000234414|ENST00000382707|RBMY1A1;REV__ENSG00000242389|ENST00000382659|RBMY1E;REV__ENSG00000242875|ENST00000383020|RBMY1B;REV__ENSG00000244395|ENST00000382680|RBMY1D;REV__nc|ENSG00000147274|P38159-2|RBMX;REV__nc|ENSG00000226941|Q15415-2|RBMY1F;REV__nc|ENSG00000234414|P0DJD3-2|RBMY1A1;REV__nc|ENSG00000234414|P0DJD3-3|RBMY1A1;REV__nc|ENSG00000244395|P0C7P1-2|RBMY1D;REV__nc|ENSG700|P0DJD4|RBMY1C 20.453626601364224 0.6087503291685402 2 KPSRQD 6 -1 42.445 0.0 0.0 5.3428 0.0 0.0 0.0 80.05146967105702 80.05146967105702 10.87205316164642 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7614393726401688 0.0 KPSRQD 5.3428 - 585 + 1 2.173 141224.9 1.0 756 2986 3743 DOHH2_400M_050219_2,3744 DOHH2_400M_050219_2,3744,KPPPGGSR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3745 18.098 277.0 477630.0 25 0 61767.0 16527 KATDFVADR 9 113 511.7668174937626 1021.5190820543252 2 511.7660400271416 MULTI CID FTMS 0 0 0 3743 465925.0625 0.2935988850900087 -4 0.1094303131103515 2 Unmodified _KATDFVADR_ ENSG00000182054|ENST00000330062|IDH2;nc|ENSG00000182054|P48735-2|IDH2 16.149105407346934 0.3995459350917656 2 KAYW 4 7 36.498 0.0 0.0 3.5729 0.0 0.0 0.0 470.2263277643188 470.2263277643188 15.69599075987611 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 KAYW 3.5729 - 314 + 1 2.173 103191.8 1.0 757 2986 3743 DOHH2_400M_050219_2,3745 DOHH2_400M_050219_2,3745,KATDFVADR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3746 18.103 264.0 291940.0 25 0 49958.0 + -1 AEQESARQL 9 92 516.2613179358382 515.2540414692381 1 516.2589599490166 MULTI CID FTMS 0 0 0 3743 266636.21875 0.866981545613077 1 -0.0425376892089843 3 nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;ENSG00000178209|ENST00000345136|PLEC 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AE 4 -1 13.958 0.0 0.0 2.7089 0.0 0.0 0.0 55.04820585816313 55.04820585816313 0.8585655819296569 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3054621874040891 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AE 2.7089 - 42 1 2.173 63510.0 1.0 758 2986 3743 DOHH2_400M_050219_2,3746 DOHH2_400M_050219_2,3746, False False AEQESARQL 18.103225 516.258959949017 3298362.5 3743.0 nc|ENSG00000178209|Q15149-5|PLEC;;nc|ENSG00000178209|Q15149-8|PLEC;;nc|ENSG00000178209|Q15149-6|PLEC;;nc|ENSG00000178209|Q15149|PLEC;;nc|ENSG00000178209|Q15149-9|PLEC;;nc|ENSG00000178209|Q15149-3|PLEC;;nc|ENSG00000178209|Q15149-7|PLEC;;nc|ENSG00000178209|Q15149-2|PLEC;;ENSG00000178209|ENST00000345136|PLEC 6.305098533630371 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3747 18.117 800.0 140640.0 25 0 12357.0 + + 8298 KTDYDTREY 9 131 595.7690301597562 1189.5235073863123 2 596.2682372927666 MULTI CID FTMS 0 0 0 3743 138322.8125 1.0 0 0.0 4 Unmodified _EQSDDKMQLP_ nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;ENSG00000122257|ENST00000319715|RBBP6 22.736283301280096 0.4578556481593033 2 KTDYDY 6 -1 39.919 0.0 0.0 3.3559 0.0 0.0 0.0 401.18076502017817 401.18076502017817 2.959777244632967 0.0 0.0 0.0 0 0.8684151806525389 0.0 0.0 0.0 KTDYDY 3.3559 - 996 + 1 2.173 84387.8 0.8700000047683716 759 2986 3743 DOHH2_400M_050219_2,3747 DOHH2_400M_050219_2,3747,EQSDDKMQLP False False KTDYDTREY 18.117059 596.268237292767 981673.1875 3743.0 nc|ENSG00000122257|Q7Z6E9-2|RBBP6;;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;;ENSG00000122257|ENST00000319715|RBBP6 6.851058642069499 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3748 18.131 800.0 203970.0 25 0 35743.0 7216 EEQWAREIG 9 118 559.267488666432 0 559.2667114138603 PEAK CID FTMS 0 0 0 3743 118313.8203125 1.0 0 0.0 5 Unmodified _EEQWAREIG_ ENSG00000105327|ENST00000439096|BBC3;ENST00000598636.1_1_19:47725061-47730093:-|nuORF;nc|ENSG00000105327|Q9BXH1-2|BBC3 11.640296217721598 0.2934555500198502 2 QAV 3 7 9.0411 0.0 0.0 0.80975 0.0 0.0 256.0309357295451 559.3021944635374 815.3331301930825 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QAV 0.80975 - 137 + 1 2.173 129474.3 0.8399999737739563 760 2986 3743 DOHH2_400M_050219_2,3748 DOHH2_400M_050219_2,3748,EEQWAREIG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3750 18.135 0.43 125670000.0 25 0 17944000.0 + 17591 KPTAAFHLL 9 60 499.29295336604406 996.571353798888 2 499.2934448122978 MULTI CID FTMS 0 0 0 3749 141207328.0 0.9157978712254742 2 -0.0415401458740234 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 2 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3540844739555 667.3540844739555 26.047575072713155 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 17 + 1 2.142 48418.5 1.0 761 2987 3749 DOHH2_400M_050219_2,3750 DOHH2_400M_050219_2,3750,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3751 18.137 78.0 540570.0 25 0 42692.0 + 35504 STMSTNGIPR 10 82 540.2609248184638 1078.5072967037274 2 540.2621948122978 MULTI CID FTMS 0 0 0 3749 842864.6875 0.0750594282474291 13 -0.2152233123779297 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 55.50274090549119 0.048383292844968 2 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 10 2 + 59.358 0.0 0.0 5.5037 5.5037 77.35 0.0 0.0 0.0 7.269987279362624 3.0102999566398125 3.0102999566398125 2.768024924119672 0 0.6694451763165201 0.0 0.7742275032520141 0.6505149978319906 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[NV]|[RG]}{I|L}P;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[NV]|[RG]}{I|L}P;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HEN{[NV]|[RG]}{I|L}P;[HD]AAEN{[NV]|[RG]}{I|L}P;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HEGG{[NV]|[RG]}{I|L}P;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{[YC]|[HE]}{[VA]|[{I|L}G]}RP 5.5037;5.2471;5.2246;4.654;4.3973;4.3749;2.5813;2.0067;1.7275;0.96111 -;-;+;-;-;-;-;-;-;- + 195 + 1 2.142 37562.7 1.0 762 2987 3749 DOHH2_400M_050219_2,3751 DOHH2_400M_050219_2,3751,STMSTNGIPR True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3752 18.139 116.0 533120.0 25 0 95084.0 + -1 SSDMECFPF 9 82 568.2047394111597 1134.3949258891191 2 568.2050659060478 MULTI CID FTMS 0 0 0 3749 556380.875 0.7389787325461492 -3 0.0913944244384765 3 Carbamidomethyl (C),Oxidation (M) _SSDM(Oxidation (M))EC(Carbamidomethyl (C))FPF_ REV__ENST00000263257.5_1_19:46437619-46437739:-|nuORF 7.910154910731844 0.6385446671287552 2 VY 2 -1 17.474 0.0 0.0 1.5404 0.0 0.0 854.2520558713444 0.0 854.2520558713444 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 VY 1.5404 - 44 + 1 2.142 53877.0 1.0 763 2987 3749 DOHH2_400M_050219_2,3752 DOHH2_400M_050219_2,3752,SSDMECFPF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3754 18.144 143.0 456580.0 25 0 75400.0 -1 STDKQMGY 8 81 473.2026409631485 944.390728993097 2 473.2030822634697 MULTI CID FTMS 0 0 0 3753 319695.65625 0.3507252147305769 5 -0.136932373046875 1 Oxidation (M) _STDKQM(Oxidation (M))GY_ ENSG00000084623|ENST00000677711|EIF3I 28.486842064014134 0.4448922141344407 2 TQQP 4 -1 19.387 0.0 0.0 2.0528 0.0 0.0 472.15990731516575 0.0 472.15990731516575 0.0 5.121928708154469 0.0 0.0 0 0.0 0.0 0.25 0.0 TQQP 2.0528 - 148 + 1 2.142 57094.8 1.0 764 2988 3753 DOHH2_400M_050219_2,3754 DOHH2_400M_050219_2,3754,STDKQMGY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3755 18.156 678.0 309690.0 25 0 31027.0 + 880 AEVGAAGKGY 10 147 461.73447725906186 921.4544015849236 2 461.7346374392509 MULTI CID FTMS 0 0 0 3753 252000.484375 0.9018115933114874 1 -0.0331268310546875 2 Unmodified _AEVGAAGKGY_ ENSG00000145191|ENST00000648915|EIF2B5;ENST00000491144.5_1_3:183857994-183862728:+|nuORF 26.268140514670165 0.3785003716575977 2 {[CP]|[EA]}VG[HT]AQG 9 5 35.111 0.0 0.0 3.8104 0.0 0.0 0.0 68.05147730045155 68.05147730045155 21.59237627845389 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.3494850021680094 0.1989700043360188 {[CP]|[EA]}VG[HT]AQG 3.8104 - 1892 + 1 2.142 163474.7 1.0 765 2988 3753 DOHH2_400M_050219_2,3755 DOHH2_400M_050219_2,3755,AEVGAAGKGY False True AEVGAAGKGY 18.155914 461.734637439251 1067415.625 3753.0 ENST00000491144.5_1_3:183857994-183862728:+|nuORF;;ENSG00000145191|ENST00000648915|EIF2B5 7.085223356882731 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3756 18.17 800.0 232790.0 25 0 36642.0 + 29729 QPLQDVQL 8 124 470.7585682072424 0 470.7572204470634 PEAK CID FTMS 0 0 0 3753 159502.640625 1.0 0 0.0 3 Unmodified _QPLQDVQL_ REV__ENSG00000106714|ENST00000297668|CNTNAP3;REV__ENSG00000154529|ENST00000377561|CNTNAP3B;REV__ENST00000333554.4_9:40307429-40337427:+|nuORF;REV__ENST00000435173.1_9:65632066-65661969:+|nuORF;REV__ENST00000451450.1_9:40307429-40322734:+|nuORF;REV__ENST00000483502.2_1_9:39100150-39103828:-|nuORF;REV__nc|ENSG00000283378|Q9BZ76-2|CNTNAP3 15.847184025352805 0.4758297917908462 2 PTAR 4 -1 26.855 0.0 0.0 2.8584 0.0 0.0 128.04588387656594 383.1954439752563 511.24132785182223 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 PTAR 2.8584 - 184 + 1 2.142 144488.9 0.8799999952316284 766 2988 3753 DOHH2_400M_050219_2,3756 DOHH2_400M_050219_2,3756,QPLQDVQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3757 18.172 132.0 504380.0 25 0 234940.0 + 38560 TSVLALATAP 10 67 472.27466415910754 942.5347753850152 2 472.2732726931572 MULTI CID FTMS 0 0 0 3753 364839.84375 0.5129637769441777 29 -0.5003757476806641 4 Unmodified _TSVLALATAP_ REV__ENSG00000108963|ENST00000263083|DPH1;REV__ENST00000572819.6_1_17:1939773-1940251:+|nuORF;REV__ENST00000576129.5_1_17:1936818-1940251:+|nuORF;REV__nc|ENSG00000108963|Q9BZG8-1|DPH1;REV__nc|ENSG00000108963|Q9BZG8-2|DPH1 10.073929032068715 0.6785112666868882 2 Y 1 -1 13.099 0.0 0.0 1.3898 0.0 0.0 761.4602800010292 0.0 761.4602800010292 0.0 1.3162071738729075 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3898 - 29 + 1 2.142 58001.0 1.0 767 2988 3753 DOHH2_400M_050219_2,3757 DOHH2_400M_050219_2,3757,TSVLALATAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3759 18.177 9.1 8760100.0 25 0 1307900.0 + -1 KPPPLMPA 8 85 433.7457279058736 865.4769028785472 2 433.7457458376884 MULTI CID FTMS 0 0 0 3758 6632500.0 0.8392043899531324 3 -0.1000652313232421 1 Oxidation (M) _KPPPLM(Oxidation (M))PA_ REV__ENSG00000163714|ENST00000473835|U2SURP;REV__ENST00000461591.5_1_3:142720470-142741912:+|nuORF;REV__nc|ENSG00000163714|O15042-2|U2SURP 10.183394434864962 0.7604730176254005 2 [VG]PTQGTAA 9 -1 43.746 0.0 0.0 5.0546 0.0 0.0 0.0 80.0514162652953 80.0514162652953 17.777067657049095 0.0 0.0 0.0 0 1.048455006504028 1.6989700043360187 0.3252574989159953 0.0 [VG]PTQGTAA 5.0546 - 289 + 1 2.142 70718.8 1.0 768 2989 3758 DOHH2_400M_050219_2,3759 DOHH2_400M_050219_2,3759,KPPPLMPA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3760 18.19 800.0 202150.0 25 0 16449.0 -1 0 150 575.2899227974052 2871.413231654026 5 575.2820312380791 MULTI CID FTMS 0 0 0 3758 166222.5625 0.3104662127819726 25 -0.4091148376464844 2 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]PS 8 -1 32.145 0.0 0.0 1.1195 0.0 0.0 0.0 1891.934236524519 1891.934236524519 16.15401796134642 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.3807196863200844 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]PS 1.1195 - 4104 1 2.142 126155.7 0.8399999737739563 769 2989 3758 DOHH2_400M_050219_2,3760 DOHH2_400M_050219_2,3760, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3761 18.195 217.0 593130.0 25 0 257350.0 -1 0 77 490.283669672053 489.276393205453 1 490.2844116091728 MULTI CID FTMS 0 0 0 3758 402372.15625 0.6578241418670424 -11 0.2813491821289062 3 2 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 2.5495 0.0 0.0 324.22982140545145 0.0 324.22982140545145 0.0 1.7609125905568137 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.5495 - 23 + 1 2.142 104289.9 1.0 770 2989 3758 DOHH2_400M_050219_2,3761 DOHH2_400M_050219_2,3761, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3762 18.199 265.0 394670.0 25 0 225790.0 -1 0 80 508.2939210783687 507.2866446117687 1 508.2943298220634 MULTI CID FTMS 0 0 0 3758 318563.59375 0.8611014509011251 -10 0.2774314880371094 4 2 Y 1 -1 11.99 0.0 0.0 2.3635 0.0 0.0 326.21237810961867 0.0 326.21237810961867 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.3635 - 21 + 1 2.142 87631.5 1.0 771 2989 3758 DOHH2_400M_050219_2,3762 DOHH2_400M_050219_2,3762, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3764 18.208 359.0 271930.0 25 0 24089.0 + 30587 REVDPDGRRTL 11 99 438.5684397764869 1312.6834899296607 3 438.5681030154228 MULTI CID FTMS 0 0 0 3763 109321.828125 0.590627002249695 2 -0.0729961395263671 1 Unmodified _REVDPDGRRTL_ ENSG00000087470|ENST00000549701|DNM1L;ENST00000547548.1_1_12:32866256-32875568:+|nuORF;nc|ENSG00000087470|O00429-2|DNM1L;nc|ENSG00000087470|O00429-3|DNM1L;nc|ENSG00000087470|O00429-4|DNM1L;nc|ENSG00000087470|O00429-5|DNM1L;nc|ENSG00000087470|O00429-6|DNM1L;nc|ENSG00000087470|O00429-8|DNM1L;nc|ENSG00000087470|O00429-9|DNM1L 10.016264844850085 0.8267966916588064 2 AP 2 10 20.969 0.0 0.0 1.5974 0.0 0.0 1126.5823984763388 0.0 1126.5823984763388 0.0 8.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 AP 1.5974 - 140 + 1 2.142 80115.1 1.0 772 2990 3763 DOHH2_400M_050219_2,3764 DOHH2_400M_050219_2,3764,REVDPDGRRTL False True REVDPDGRRTL 18.207922 438.568103015423 726472.625 3763.0 nc|ENSG00000087470|O00429-5|DNM1L;;nc|ENSG00000087470|O00429-6|DNM1L;;nc|ENSG00000087470|O00429-9|DNM1L;;nc|ENSG00000087470|O00429-4|DNM1L;;ENSG00000087470|ENST00000549701|DNM1L;;nc|ENSG00000087470|O00429-3|DNM1L;;nc|ENSG00000087470|O00429-8|DNM1L;;nc|ENSG00000087470|O00429-2|DNM1L;;ENST00000547548.1_1_12:32866256-32875568:+|nuORF 0.0236062705516815 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3765 18.214 326.0 309140.0 25 0 83141.0 31317 RMFGLGAPV 9 98 474.2615684201202 946.5085839070404 2 474.2621032595634 MULTI CID FTMS 0 0 0 3763 167811.796875 0.0205862670637484 20 -0.2712116241455078 2 Unmodified _RMFGLGAPV_ ENST00000299413.6_1_11:35832336-35832669:+|nuORF 18.13498045792455 0.3457906370836843 2 [{I|L}T]AQSV 6 7 45.623 0.0 0.0 4.8201 0.0 0.0 0.0 344.15815149478755 344.15815149478755 32.461987796517704 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.5 [{I|L}T]AQSV 4.8201 - 270 + 1 2.142 85000.5 1.0 773 2990 3763 DOHH2_400M_050219_2,3765 DOHH2_400M_050219_2,3765,RMFGLGAPV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3766 18.227 783.0 215060.0 25 0 30410.0 + -1 DGCTPLQSCS 10 132 534.2082666534162 1066.4019803736323 2 534.2081786990166 MULTI CID FTMS 0 0 0 3763 232198.421875 1.0 0 0.0 3 Carbamidomethyl (C) _DGC(Carbamidomethyl (C))TPLQSCS_ REV__ENSG00000111266|ENST00000298573|DUSP16 13.90604991867851 0.6142120002215601 2 DQ{M(Oxidation (M))|F}EK 5 -1 38.951 0.0 0.0 3.6526 0.0 0.0 401.09831331419633 0.0 401.09831331419633 0.0 15.661355588147153 0.0 0.0 0 0.2302046884880938 0.0 0.6643943297944485 0.3807196863200844 DQ{M(Oxidation (M))|F}EK 3.6526 - 407 + 1 2.142 131056.0 1.0 774 2990 3763 DOHH2_400M_050219_2,3766 DOHH2_400M_050219_2,3766,DGCTPLQSCS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3768 18.245 800.0 174890.0 25 0 40734.0 + 13782 HSIGHATLNL 10 135 531.7864961422808 1061.5584393513616 2 531.7842285037041 MULTI CID FTMS 0 0 0 3767 65325.26953125 0.1270888733858612 19 -0.2432308197021484 1 Unmodified _HSIGHATLNL_ REV__ENSG00000142798|ENST00000374695|HSPG2 26.268140514670165 0.3785003716575977 2 KTTHR{NN|[MP]|[D{I|L}]|[EV]}K 8 -1 58.509 0.0 0.0 5.5116 0.0 0.0 64.00421766741688 0.0 64.00421766741688 0.0 46.32462268984752 0.0 0.0 0 1.2302046884880935 0.0 1.5138793319624575 0.5941876774005249 KTTHR{NN|[MP]|[D{I|L}]|[EV]}K 5.5116 - 1814 + 1 2.12 111675.2 0.7799999713897705 775 2991 3767 DOHH2_400M_050219_2,3768 DOHH2_400M_050219_2,3768,HSIGHATLNL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3769 18.258 800.0 94144.0 25 0 8875.8 + 38023 TPAGRAPAAP 10 108 454.7508050685349 907.4870572038698 2 454.7506591677666 MULTI CID FTMS 0 0 0 3767 94343.296875 1.0 0 0.0 2 Unmodified _TPAGRAPAAP_ REV__ENST00000462770.5_1_3:133661447-133748739:-|nuORF;REV__ENST00000464676.5_1_3:133698382-133748739:-|nuORF 17.11289562659939 0.5604042439455784 2 TPNP[RV]GAP 9 -1 + 43.358 0.0 0.0 4.7778 4.7778 75.434 0.0 0.0 0.0 6.636713087174861 2.361860322061468 2.361860322061468 3.336685782334761 0 0.8807196863200843 1.5228787452803376 0.0 0.0 TPNP[RV]GAP;TP[RV][NP]GAP;TPNP[RV]QP;TPGGP[RV]GAP;[NP]V{[NV]|[RG]}PTAP;TP[RV][NP]QP;TP[RV]Q[NP]P;TPGGP[RV]QP;TPN[R{I|L}][NP]P;TPNP[RV]AGP 4.7778;4.4101;3.8151;3.7631;3.4903;3.4475;2.9843;2.7945;2.765;2.7263 -;-;-;-;-;-;-;-;-;- 383 + 1 2.12 61147.8 0.6399999856948853 776 2991 3767 DOHH2_400M_050219_2,3769 DOHH2_400M_050219_2,3769,TPAGRAPAAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3770 18.272 800.0 75737.0 25 0 4499.7 + -1 STGDVNVE 8 80 820.3686628260178 0 820.3663818240166 PEAK CID FTMS 0 0 0 3767 79541.7734375 0.6624495209327825 2 -0.0487556457519531 3 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))FC(Carbamidomethyl (C))IFFFFFFFE_ ENSG00000186395|ENST00000269576|KRT10;P13645;P02535-1 1.3295316138638542 0.4761840153648598 2 {M(Oxidation (M))|F}VNV 4 -1 31.983 0.0 0.0 1.9517 0.0 0.0 819.3628549374009 357.1058138483032 1176.468668785704 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.305462187404089 {M(Oxidation (M))|F}VNV 1.9517 - 233 + 1 2.12 47348.7 0.5600000023841858 777 2991 3767 DOHH2_400M_050219_2,3770 DOHH2_400M_050219_2,3770,FCIFFFFFFFE False False STGDVNVE 18.272276 820.366381824017 687834.6875 3767.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 5.178715864817302 1.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3773 18.28 64.0 717870.0 25 0 85986.0 + 1993 ANYKKHVDL 9 80 363.2014862396325 1086.5826293190976 3 363.2013122439384 MULTI CID FTMS 0 0 0 3772 888412.3125 0.5409898076381325 4 -0.045969009399414 1 Unmodified _ANYKKHVDL_ REV__ENSG00000055130|ENST00000325222|CUL1 26.88365393820708 0.1891292719743517 2 [DV]H 3 -1 22.676 0.0 0.0 2.0869 0.0 0.0 0.0 732.4048698798975 732.4048698798975 3.3843154735291847 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [DV]H 2.0869 - 53 1 2.12 43745.4 1.0 778 2993 3772 DOHH2_400M_050219_2,3773 DOHH2_400M_050219_2,3773,ANYKKHVDL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3774 18.284 183.0 284530.0 25 0 29993.0 + 6309 DVHKKYNAL 9 80 544.2978464439357 1086.5811399546712 2 544.2979614138603 MULTI CID FTMS 0 0 0 3772 314975.65625 0.5530734162934413 6 -0.0537090301513671 2 Unmodified _DVHKKYNAL_ ENSG00000055130|ENST00000325222|CUL1 38.17557092003332 0.0854718145212029 2 DVHKKKD 7 4 63.492 0.0 0.0 5.8433 0.0 0.0 0.0 233.10494409732652 233.10494409732652 51.70956768853428 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.3807196863200844 0.0 DVHKKKD 5.8433 - 202 + 1 2.12 43390.8 1.0 779 2993 3772 DOHH2_400M_050219_2,3774 DOHH2_400M_050219_2,3774,DVHKKYNAL True True DVHKKYNAL 18.284001 544.29796141386 6785903.5 3772.0 ENSG00000055130|ENST00000325222|CUL1 7.170784791310628 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3775 18.298 800.0 153040.0 25 0 12516.0 + 750 AEQPAPAHAY 10 120 527.751499325142 1053.488445717084 2 527.7518188357353 MULTI CID FTMS 0 0 0 3772 105965.84375 0.843396279092731 2 -0.0258235931396484 3 Unmodified _AEQPAPAHAY_ ENST00000276282.6_1_8:8750374-8750710:-|nuORF 26.88365393820708 0.3646707531412818 2 TP{M(Oxidation (M))|F}Y 4 8 20.93 0.0 0.0 1.9867 0.0 0.0 527.2547474591812 0.0 527.2547474591812 0.0 5.713337517843655 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 TP{M(Oxidation (M))|F}Y 1.9867 - 244 1 2.12 96780.4 0.800000011920929 780 2993 3772 DOHH2_400M_050219_2,3775 DOHH2_400M_050219_2,3775,AEQPAPAHAY False True AEQPAPAHAY 18.297833 527.751818835735 693055.6875 3772.0 ENST00000276282.6_1_8:8750374-8750710:-|nuORF 3.215382138888041 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3778 18.318 800.0 91736.0 25 0 6802.5 + 35230 SSDRHLTQY 9 110 553.7647084017956 1105.514863870391 2 553.7668334841728 MULTI CID FTMS 0 0 0 3777 78781.1796875 0.6288303246648127 -10 0.2306079864501953 1 Unmodified _SSDRHLTQY_ ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1 29.84058131909904 0.1515068451768857 2 [AG]T{[ES]|[DT]|[{I|L}C]}H{I|L}TQY 10 4 + 65.954 0.0 0.0 5.9659 5.9659 78.996 0.0 0.0 0.0 8.86623162815269 16.53212513775344 8.86623162815269 2.5 0 0.6861818737241735 1.6989700043360187 1.174742501084005 0.0 [AG]T{[ES]|[DT]|[{I|L}C]}H{I|L}TQY;[AG]Y[PG]H{I|L}TQY;[AG]Y[YQ]{I|L}TQY;[QT]{[ES]|[DT]|[{I|L}C]}H{I|L}TQY;[AG]T{[ES]|[DT]|[{I|L}C]}H{I|L}T[AG]Y;[AG]Y[PG]H{I|L}T[AG]Y;[AG]T{M(Oxidation (M))|F}[YR]TQY;[YQ][PG]H{I|L}TQY;[AG]Y[YQ]{I|L}T[AG]Y;[AG]T{M(Oxidation (M))|F}[YK]EQY 5.9659;5.7397;5.4212;5.1639;5.1369;4.9107;4.8304;4.7012;4.5882;4.5581 -;-;-;-;-;-;-;-;-;- 774 1 2.107 60660.5 0.75 781 2995 3777 DOHH2_400M_050219_2,3778 DOHH2_400M_050219_2,3778,SSDRHLTQY False True SSDRHLTQY 18.317855 553.766833484173 614200.25 3777.0 ENSG00000153922|ENST00000614616|CHD1;;nc|ENSG00000153922|O14646-2|CHD1 5.371200720469157 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3783 18.346 800.0 96914.0 25 0 31844.0 + -1 CNMGCDKCRY 10 52 625.2324881154557 1248.4504232977113 2 625.2339355349541 MULTI CID FTMS 0 0 0 3782 59617.6484375 0.6153290331861452 -2 0.0077400207519531 1 Carbamidomethyl (C) _CNMGCDKC(Carbamidomethyl (C))RY_ REV__ENSG00000172575|ENST00000310803|RASGRP1;REV__nc|ENSG00000172575|O95267-2|RASGRP1;REV__nc|ENSG00000172575|O95267-3|RASGRP1 1.6526216038709556 0.7189921496796233 2 Y 1 -1 15.485 0.0 0.0 1.2403 0.0 0.0 1067.3761720543505 0.0 1067.3761720543505 0.0 2.525749891599532 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2403 + + 9 + 1 2.107 66692.4 0.6299999952316284 782 2999 3782 DOHH2_400M_050219_2,3783 DOHH2_400M_050219_2,3783,CNMGCDKCRY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3785 18.35 76.0 635850.0 25 0 92025.0 + 16552 KAYERNEL 8 69 511.7668174937626 1021.5190820543252 2 511.7668334841728 MULTI CID FTMS 0 0 0 3784 603798.8125 0.3804789062375694 10 -0.1245975494384765 1 Unmodified _KAYERNEL_ ENSG00000113141|ENST00000417647|IK 13.042465956692816 0.7182358012947757 2 KAYE 4 4 40.433 0.0 0.0 3.9581 0.0 0.0 0.0 527.2589205377561 527.2589205377561 15.21652514092061 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + KAYE 3.9581 + + 16 + 1 2.107 40930.2 1.0 783 3000 3784 DOHH2_400M_050219_2,3785 DOHH2_400M_050219_2,3785,KAYERNEL False True KAYERNEL 18.350324 511.766833484173 16108655.0 3784.0 ENSG00000113141|ENST00000417647|IK 3.6023683547973637 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3788 18.363 366.0 232950.0 25 0 34300.0 + 37227 TIKSTTIPNS 10 93 531.2967726383898 1060.5789923435796 2 531.2962524294853 MULTI CID FTMS 0 0 0 3787 114089.96875 0.6203461241695098 -8 0.0565776824951171 1 Unmodified _TIKSTTIPNS_ REV__ENSG00000082497|ENST00000367012|SERTAD4;REV__ENST00000482421.1_1_1:210411290-210419944:+|nuORF 27.628801355627647 0.3479284626772844 2 [{I|L}T][C(Carbamidomethyl (C))R]{[QG]|[NA]}{I|L}T{I|L} 9 -1 + 50.68 0.0 0.0 4.7785 4.7785 79.204 0.0 0.0 0.0 22.24301211992909 37.49211016768814 22.24301211992909 6.576447055154517 0 0.5 2.0 0.8522338482433751 0.3054621874040891 [{I|L}T][C(Carbamidomethyl (C))R]{[QG]|[NA]}{I|L}T{I|L};[{I|L}T][C(Carbamidomethyl (C))R][DG]KV{I|L};[{I|L}T][C(Carbamidomethyl (C))R]{[MG]|[TS]}K[VP];[{I|L}T]KC(Carbamidomethyl (C)){[CP]|[EA]}KV{I|L};[{I|L}T][WM][W{I|L}]V{I|L};{[QN]|[E{I|L}]|[KN]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[NV]|[RG]}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}[YK]K[VP];{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KV{I|L};[{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}H]|[RQ]}ATKV{I|L};{[QN]|[E{I|L}]|[KN]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CP]|[EA]}KV{I|L} 4.7785;4.1584;3.5031;3.3671;3.2409;2.3682;2.1775;2.0319;1.9141;1.7481 -;-;-;-;-;-;-;-;-;- 329 1 2.107 73785.9 1.0 784 3002 3787 DOHH2_400M_050219_2,3788 DOHH2_400M_050219_2,3788,TIKSTTIPNS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3789 18.377 800.0 156960.0 25 0 36580.0 + 23584 LTNLKKRGDE 10 84 587.3329814596109 1172.6514099860217 2 587.3321411013603 MULTI CID FTMS 0 0 0 3787 84398.6171875 0.5591180558984371 -4 0.0285873413085937 2 Unmodified _LTNLKKRGDE_ REV__ENSG00000004399|ENST00000324093|PLXND1;REV__nc|ENSG00000004399|Q9Y4D7-2|PLXND1 15.248480904072842 0.5916873121453583 2 {I|L}{M(Oxidation (M))|F}R 3 -1 23.188 0.0 0.0 1.9774 0.0 0.0 0.0 753.3929537408811 753.3929537408811 4.291702830821112 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}R 1.9774 - 76 + 1 2.107 99799.3 0.6200000047683716 785 3002 3787 DOHH2_400M_050219_2,3789 DOHH2_400M_050219_2,3789,LTNLKKRGDE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3793 18.39 3.4 10922000.0 25 0 1746100.0 + 17592 KPTAAFHLL 9 50 499.29295336604406 996.571353798888 2 499.2933227419853 MULTI CID FTMS 0 0 0 3792 15964991.0 0.1035406942331906 20 -0.46502685546875 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 2 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3542574518186 667.3542574518186 25.51152522447381 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 24 + 1 2.099 36022.1 1.0 786 3005 3792 DOHH2_400M_050219_2,3793 DOHH2_400M_050219_2,3793,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3794 18.395 268.0 177600.0 25 0 16076.0 + 35505 STMSTNGIPR 10 89 540.2614564863895 1078.508360039579 2 540.2610961794853 MULTI CID FTMS 0 0 0 3792 202516.234375 0.4022893831616529 -5 0.0394229888916015 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 53.40400417844725 0.0601721406801337 2 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 75.425 0.0 0.0 6.9934 6.9934 84.99 0.0 0.0 0.0 7.269987279362624 4.771212547196626 4.771212547196626 4.771212547196626 0 0.805462187404089 0.0 0.4247425010840047 0.6747425010840047 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNGR{I|L}P;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGGR{I|L}P;{[{M(Oxidation (M))|F}C]|[YS]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}NG{I|L}RP;{[{M(Oxidation (M))|F}C]|[YS]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}NG{I|L}PR;{[{M(Oxidation (M))|F}C]|[YS]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}GGG{I|L}RP;{[{M(Oxidation (M))|F}C]|[YS]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}NGR{I|L}P 6.9934;6.551;6.1437;5.9515;5.7013;5.1018;3.5085;3.0661;2.6547;2.4666 -;+;-;-;-;-;-;-;-;- + 269 + 1 2.099 41964.6 1.0 787 3005 3792 DOHH2_400M_050219_2,3794 DOHH2_400M_050219_2,3794,STMSTNGIPR True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3797 18.409 433.0 148510.0 25 0 7059.6 + 35358 STDKQMGY 8 106 465.2056813831227 928.3968098330454 2 465.2050659060478 MULTI CID FTMS 0 0 0 3796 84054.625 0.533064965798895 -3 0.0174827575683593 1 Unmodified _STDKQMGY_ ENSG00000084623|ENST00000677711|EIF3I 36.04419817259434 0.3004715606373109 2 {[MG]|[TS]}[Y{I|L}][EP]GY 8 4 + 26.215 0.0 0.0 2.8237 2.8237 78.101 0.0 0.0 0.0 5.246134210770919 9.04824662788698 5.246134210770919 10.523787536356576 0 0.3807196863200844 0.0 0.2742275032520141 0.0 {[MG]|[TS]}[Y{I|L}][EP]GY;{[MG]|[TS]}[CS]RRGY;{[MG]|[TS]}D[VP]{[DA]|[EG]}QP;{[MG]|[TS]}[Y{I|L}][YE]GP;{[MG]|[TS]}D[VP]{[DA]|[EG]}AGP 2.8237;1.6902;1.4152;1.2649;0.88427 -;-;-;-;- 222 + 1 2.099 56297.2 1.0 788 3007 3796 DOHH2_400M_050219_2,3797 DOHH2_400M_050219_2,3797,STDKQMGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3798 18.414 279.0 319580.0 25 0 34193.0 + -1 AEDGLKHEY 9 102 531.2492539231154 1060.4839549130306 2 531.2477905154228 MULTI CID FTMS 0 0 0 3796 123564.359375 0.689472476922244 -3 0.0174827575683593 2 Carbamidomethyl (C) _LTRC(Carbamidomethyl (C))MFAY_ nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000248333|P21127-4|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;ENSG00000008128|ENST00000404249|CDK11A;nc|ENSG00000248333|P21127-12|CDK11B;nc|ENSG00000008128|Q9UQ88-5|CDK11A;ENST00000356937.7_1_1:1634348-1635645:-|nuORF;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;nc|ENSG00000248333|P21127-3|CDK11B;nc|ENSG00000008128|Q9UQ88-10|CDK11A;nc|ENSG00000008128|Q9UQ88-8|CDK11A;nc|ENSG00000248333|P21127-5|CDK11B;nc|ENSG00000248333|P21127-6|CDK11B;ENSG00000248333|ENST00000341832|CDK11B;nc|ENSG00000248333|P21127|CDK11B;nc|ENSG00000248333|P21127-10|CDK11B 26.34127834903884 0.4900704351052977 2 [{I|L}T][C(Carbamidomethyl (C))R]TSK 7 -1 43.02 0.0 0.0 4.0566 0.0 0.0 0.0 211.01557441889057 211.01557441889057 28.28295703098071 0.0 0.0 0.0 0 0.0 2.0 0.9559771852360796 0.3494850021680094 [{I|L}T][C(Carbamidomethyl (C))R]TSK 4.0566 - 931 1 2.099 72324.2 1.0 789 3007 3796 DOHH2_400M_050219_2,3798 DOHH2_400M_050219_2,3798,LTRCMFAY False False AEDGLKHEY 18.413788 531.247790515423 1011179.4375 3796.0 nc|ENSG00000008128|Q9UQ88|CDK11A;;nc|ENSG00000248333|P21127-8|CDK11B;;nc|ENSG00000248333|P21127-4|CDK11B;;nc|ENSG00000248333|P21127-9|CDK11B;;ENSG00000008128|ENST00000404249|CDK11A;;nc|ENSG00000248333|P21127-12|CDK11B;;nc|ENSG00000008128|Q9UQ88-5|CDK11A;;ENST00000356937.7_1_1:1634348-1635645:-|nuORF;;nc|ENSG00000008128|Q9UQ88-4|CDK11A;;nc|ENSG00000008128|Q9UQ88-3|CDK11A;;nc|ENSG00000248333|P21127-3|CDK11B;;nc|ENSG00000008128|Q9UQ88-10|CDK11A;;nc|ENSG00000008128|Q9UQ88-8|CDK11A;;nc|ENSG00000248333|P21127-5|CDK11B;;nc|ENSG00000248333|P21127-6|CDK11B;;ENSG00000248333|ENST00000341832|CDK11B;;nc|ENSG00000248333|P21127|CDK11B;;nc|ENSG00000248333|P21127-10|CDK11B 0.4297556579113006 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3801 18.424 181.0 361170.0 25 0 87045.0 + -1 IQRLETMK 8 67 517.7869263296644 0 517.7863036990166 PEAK CID FTMS 0 0 0 3800 164061.734375 0.3400077379645927 -2 0.0193099975585937 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.4320151646958274 2 T 1 -1 20.485 0.0 0.0 1.9819 0.0 0.0 293.14157497573336 636.3472125698684 929.4887875456018 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 T 1.9819 + + 24 + 1 2.099 58216.1 1.0 790 3009 3800 DOHH2_400M_050219_2,3801 DOHH2_400M_050219_2,3801,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3802 18.429 267.0 375120.0 25 0 171310.0 -1 VMEVWCRNRIP 11 63 492.581884125872 1474.723822977816 3 492.5819274783134 MULTI CID FTMS 0 0 0 3800 55230.453125 0.3295893305057192 -3 0.0231227874755859 2 Carbamidomethyl (C),Oxidation (M) _VM(Oxidation (M))EVWC(Carbamidomethyl (C))RNRIP_ ENSG00000163357|ENST00000295542|DCST1;nc|ENSG00000163357|Q5T197-2|DCST1;nc|ENSG00000163357|Q5T197-3|DCST1 1.4551175022131473 0.8682825962816412 2 GS 2 -1 12.391 0.0 0.0 0.8402 0.0 0.0 842.3991770322897 485.2472147335743 1327.646391765864 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 GS 0.8402 - 36 + 1 2.099 80263.1 1.0 791 3009 3800 DOHH2_400M_050219_2,3802 DOHH2_400M_050219_2,3802,VMEVWCRNRIP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3803 18.443 800.0 138440.0 25 0 15380.0 + 32728 SEAPSGESRKF 11 94 597.7909183795017 1193.567283825803 2 597.7908203005791 MULTI CID FTMS 0 0 0 3800 138291.65625 0.6164931908749156 -2 0.0193099975585937 3 Unmodified _SEAPSGESRKF_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 44.391923383255 0.1486875248750151 2 {[ES]|[DT]|[{I|L}C]}APSG[VS]W{M(Oxidation (M))|F}K 11 4 + 51.661 0.0 0.0 4.3283 4.3283 79.513 0.0 0.0 0.0 34.84336423630429 2.4350942773867814 2.4350942773867814 9.128498242811006 0 1.325257498915995 0.0 0.4247425010840047 0.4634679910804405 {[ES]|[DT]|[{I|L}C]}APSG[VS]W{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}APSG[VS]{[DA]|[EG]}{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}APS[KT]{[CP]|[EA]}{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}AP[QT]K{M(Oxidation (M))|F}{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}AP[{I|L}V]YE{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}A{M(Oxidation (M))|F}Y[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}A{M(Oxidation (M))|F}Y[{I|L}V]P[DG]P;{[DA]|[EG]}TP[QT]K{M(Oxidation (M))|F}{[WT]|[RM]};{[DA]|[EG]}TP[{I|L}V]YE{[WT]|[RM]};[PS]CP[QT]K{M(Oxidation (M))|F}{[WT]|[RM]} 4.3283;3.5635;3.0581;3.0154;2.994;2.4745;2.3842;1.6111;1.5898;1.3888 -;-;-;-;-;-;-;-;-;- 376 + 1 2.099 87108.5 0.6800000071525574 792 3009 3800 DOHH2_400M_050219_2,3803 DOHH2_400M_050219_2,3803,SEAPSGESRKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3804 18.456 800.0 174520.0 25 0 34182.0 28074 PPHPPPPPP 9 133 466.7537567423312 931.4929605514624 2 467.2603332400322 MULTI CID FTMS 0 0 0 3800 126720.59375 0.5095417690316579 -11 0.0921821594238281 4 Unmodified _PPHPPPPPP_ ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000066855|ENST00000262146|MTFR1;ENSG00000163064|ENST00000295206|EN1;ENSG00000175879|ENST00000313173|HOXD8;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000066855|Q15390-2|MTFR1;nc|ENSG00000175879|P13378-2|HOXD8;REV__nc|ENSG00000182095|O15417-2|TNRC18 14.581692164780916 0.4419739649577144 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPPPP 9 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPP + + 14.157 -0.33424 -0.063631 1.5198 1.5198 47.125 0.0 0.0 0.0 0.0 1.9382002601611248 0.0 0.0 0 0.5 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPPPP 1.5198 - 79 + 1 2.099 112047.6 0.6100000143051147 793 3009 3800 DOHH2_400M_050219_2,3804 DOHH2_400M_050219_2,3804,PPHPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3805 18.47 800.0 95012.0 25 0 5430.8 + 6864 EEEEKQKSTW 10 101 647.3017194202472 1292.5888859072943 2 647.3029052615166 MULTI CID FTMS 0 0 0 3800 96991.78125 0.7145455845157007 -2 0.0193099975585937 5 Unmodified _EEEEKQKSTW_ ENSG00000115761|ENST00000381685|NOL10;nc|ENSG00000115761|Q9BSC4-2|NOL10;nc|ENSG00000115761|Q9BSC4-4|NOL10 104.48436234954404 0.0061796757808163 2 EEEEKQKSTW 10 0 + 85.135 0.0 0.0 6.5864 6.5864 88.26 0.0 0.0 0.0 58.25840255658129 16.532125137753425 16.532125137753425 9.164539485499247 0 2.385151878060192 1.3010299956639813 1.064909327626439 0.0 + + EEEEKQKSTW;EEEEK[AG]KSTW;EEEEK{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VTW;EEE[Y{I|L}][QP]VTW;EEE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[EP]VTW;[YT]QKQKEE[HC];[{M(Oxidation (M))|F}E][HC]KQKSTW;[YT]QK[AG]KEE[HC];EEEPAAQKST{[CT]|[{M(Oxidation (M))|F}G]};{[CT]|[{M(Oxidation (M))|F}G]}TV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]STW 6.5864;5.8774;5.5049;4.1322;3.9606;3.8836;3.7213;3.1746;2.9414;2.7829 +;-;-;-;-;-;-;-;-;- + 718 + 1 2.099 60121.0 0.5600000023841858 794 3009 3800 DOHH2_400M_050219_2,3805 DOHH2_400M_050219_2,3805,EEEEKQKSTW True True EEEEKQKSTW 18.47019 647.302905261517 829756.1875 3800.0 nc|ENSG00000115761|Q9BSC4-2|NOL10;;nc|ENSG00000115761|Q9BSC4-4|NOL10;;ENSG00000115761|ENST00000381685|NOL10 8.04638703664144 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3807 18.477 122.0 787070.0 25 0 93464.0 + -1 KPPPLMPA 8 92 433.7457279058736 865.4769028785472 2 433.7455932497978 MULTI CID FTMS 0 0 0 3806 390286.0625 0.0493825521277832 24 -0.5423412322998047 1 Oxidation (M) _KPPPLM(Oxidation (M))PA_ REV__ENSG00000163714|ENST00000473835|U2SURP;REV__ENST00000461591.5_1_3:142720470-142741912:+|nuORF;REV__nc|ENSG00000163714|O15042-2|U2SURP 10.183394434864962 0.7604730176254005 2 [VG]PT 4 -1 31.682 0.0 0.0 3.6607 0.0 0.0 0.0 508.2629488580688 508.2629488580688 2.9710624853235146 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VG]PT 3.6607 - 58 + 1 2.099 84090.1 1.0 795 3010 3806 DOHH2_400M_050219_2,3807 DOHH2_400M_050219_2,3807,KPPPLMPA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3808 18.478 75.0 1022200.0 25 0 205590.0 1842 ALTTNVSNK 9 75 474.26165260083184 946.5087522684636 2 474.2613708376884 MULTI CID FTMS 0 0 0 3806 832960.75 0.9999953479416968 -1 0.0524272918701171 2 Unmodified _ALTTNVSNK_ ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-5|OTOF 27.628801355627647 0.1796483985696185 2 [{I|L}T]AQSVSNK 9 4 + 78.677 0.0 0.0 8.3124 8.3124 92.808 0.0 0.0 0.0 59.38043486046328 13.256434167410733 13.256434167410733 9.208187539523747 0 0.805462187404089 2.0 0.0 1.1571406706489746 [{I|L}T]AQSVSNK;[{I|L}T]A[AG]SVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSGGK;[{I|L}T]A[{M(Oxidation (M))|F}T]QA[VP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVSQA[VP];[{I|L}A]YVSQA[VP];[{I|L}T]A[{M(Oxidation (M))|F}T][AG]A[VP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVS[AG]A[VP];[{I|L}A]YVS[AG]A[VP] 8.3124;7.3395;7.3395;6.3713;4.8068;4.7707;4.7046;3.3852;3.3491;3.283 -;-;-;-;-;-;-;-;-;- 209 + 1 2.099 62901.3 1.0 796 3010 3806 DOHH2_400M_050219_2,3808 DOHH2_400M_050219_2,3808,ALTTNVSNK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3809 18.481 124.0 623910.0 25 0 52604.0 + 32729 SEAPSGESRKF 11 81 398.8634023839561 1193.5683777520685 3 398.8629638552666 MULTI CID FTMS 0 0 0 3806 528413.375 1.0 0 0.0 3 Unmodified _SEAPSGESRKF_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 24.881564428377168 0.5079759154518888 2 {[ES]|[DT]|[{I|L}C]}APSW 6 6 41.159 0.0 0.0 3.4484 0.0 0.0 0.0 533.2831099577909 533.2831099577909 34.75985482704097 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 {[ES]|[DT]|[{I|L}C]}APSW 3.4484 - 111 + 1 2.099 69141.6 1.0 797 3010 3806 DOHH2_400M_050219_2,3809 DOHH2_400M_050219_2,3809,SEAPSGESRKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3810 18.484 169.0 323130.0 25 0 18737.0 -1 LVYAEMEK 8 73 512.7561193974625 1023.497685861725 2 512.7566406130791 MULTI CID FTMS 0 0 0 3806 286539.125 0.7513620469919016 -1 0.0524272918701171 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LVYAEMEK_ ENST00000418814.6_2_6:71247997-71248084:+|nuORF 21.74664581756881 0.5868176546531598 2 HVDAAEK 7 -1 65.385 0.0 0.0 6.3884 0.0 0.0 255.1203595375297 0.0 255.1203595375297 0.0 54.98465756767177 0.0 0.0 0 2.443672679568534 0.0 0.5 0.3252574989159953 HVDAAEK 6.3884 - 136 + 1 2.099 47269.4 1.0 798 3010 3806 DOHH2_400M_050219_2,3810 DOHH2_400M_050219_2,3810,LVYAEMEK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3811 18.498 800.0 160080.0 25 0 45689.0 23877 LVLEDAGQITV 11 105 579.32281044974 1156.63106796628 2 579.3232910037041 MULTI CID FTMS 0 0 0 3806 128978.7734375 0.7116203994178512 -1 0.0524272918701171 5 Unmodified _LVLEDAGQITV_ ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN 10.799506525563784 0.8105043987015127 2 [VG]P 3 9 25.589 0.0 0.0 2.2124 0.0 0.0 0.0 900.4527071588499 900.4527071588499 2.637693082333218 0.0 0.0 0.0 0 0.7059771852360797 1.5228787452803376 0.0 0.0 [VG]P 2.2124 - 177 + 1 2.099 97505.7 0.5899999737739563 799 3010 3806 DOHH2_400M_050219_2,3811 DOHH2_400M_050219_2,3811,LVLEDAGQITV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3812 18.507 521.0 208190.0 25 0 14127.0 -1 0 59 575.2903582449574 2871.4154088917867 5 575.6913940310478 MULTI CID FTMS 0 0 0 3806 95766.6015625 1.0 0 0.0 6 2 {M(Oxidation (M))|F}P[TP] 4 -1 7.5359 0.0 0.0 0.26245 0.0 0.0 2411.185411188465 0.0 2411.185411188465 0.0 3.556518697048717 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}P[TP] 0.26245 - 27 + 1 2.099 88374.5 1.0 800 3010 3806 DOHH2_400M_050219_2,3812 DOHH2_400M_050219_2,3812, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3814 18.514 260.0 174610.0 25 0 11250.0 -1 0 90 439.5351355936559 2192.63929563528 5 439.7352172732353 MULTI CID FTMS 0 0 0 3813 131019.9375 1.0 0 0.0 1 2 TGP 3 -1 26.198 0.0 0.0 1.1948 0.0 0.0 1919.50594710188 0.0 1919.50594710188 0.0 20.71333751784365 0.0 0.0 0 0.0 0.0 0.0 0.0 TGP 1.1948 - 66 + 1 2.099 40877.2 1.0 801 3011 3813 DOHH2_400M_050219_2,3814 DOHH2_400M_050219_2,3814, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3815 18.528 800.0 271760.0 25 0 31777.0 -1 YDCHESEK 8 161 534.2090835285655 1066.403614123931 2 534.2089721560478 MULTI CID FTMS 0 0 0 3813 134333.5 0.6824893280467996 -5 0.1124801635742187 2 Carbamidomethyl (C) _YDC(Carbamidomethyl (C))HESEK_ ENSG00000185219|ENST00000396077|ZNF445 8.593279151180031 0.7721714526254883 2 DQ{M(Oxidation (M))|F}EK 5 -1 33.104 0.0 0.0 3.1043 0.0 0.0 401.1021374140534 0.0 401.1021374140534 0.0 16.14770824742763 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.3054621874040891 DQ{M(Oxidation (M))|F}EK 3.1043 - 528 + 1 2.099 164805.0 0.5 802 3011 3813 DOHH2_400M_050219_2,3815 DOHH2_400M_050219_2,3815,YDCHESEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3816 18.542 800.0 106600.0 25 0 11607.0 + -1 FWYNCWCYLPN 11 113 811.8322025176512 1621.6498521021024 2 811.8317138552666 MULTI CID FTMS 0 0 0 3813 117316.8046875 0.2014078368701447 -8 0.1301193237304687 3 2 Carbamidomethyl (C) _FWYNC(Carbamidomethyl (C))WC(Carbamidomethyl (C))YLPN_ REV__ENST00000272542.7_1_2:113404910-113405027:+|nuORF 0.3070304955306653 0.8736993455979228 2 {[YD]|[{M(Oxidation (M))|F}M]}GSYSGSQE 10 -1 61.992 0.0 0.0 3.8228 0.0 0.0 0.0 545.2186746941524 545.2186746941524 17.144229243591262 0.0 0.0 0.0 0 0.8494850021680094 2.0 1.6989700043360187 0.0 {[YD]|[{M(Oxidation (M))|F}M]}GSYSGSQE 3.8228 - 10958 1 2.099 61670.6 0.5 803 3011 3813 DOHH2_400M_050219_2,3816 DOHH2_400M_050219_2,3816,FWYNCWCYLPN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3817 18.556 800.0 120130.0 25 0 15354.0 + 7164 EEPIPFYPK 9 114 560.2907238648875 0 560.2925903201103 PEAK CID FTMS 0 0 0 3813 107299.3984375 0.945856140138232 1 -0.0592842102050781 4 Unmodified _EEPIPFYPK_ REV__ENSG00000153187|ENST00000640218|HNRNPU;REV__ENST00000468690.2_2_1:245021279-245021477:-|nuORF;REV__nc|ENSG00000153187|Q00839-2|HNRNPU 26.88365393820708 0.1386685954232994 2 QAVR 4 -1 31.208 0.0 0.0 2.79 0.0 0.0 258.0805703425028 403.2006747996674 661.2812451421702 0.0 0.0 0.0 0.0 0 1.3684151806525389 0.0 0.0 0.4247425010840047 QAVR 2.79 - 73 + 1 2.099 77663.7 0.550000011920929 804 3011 3813 DOHH2_400M_050219_2,3817 DOHH2_400M_050219_2,3817,EEPIPFYPK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3818 18.566 596.0 186390.0 25 0 15636.0 + 13222 HGTIKNQL 8 136 455.75873446992426 909.5029160066484 2 455.7589904665947 MULTI CID FTMS 0 0 0 3813 112361.671875 0.5047309399005551 -5 0.1124801635742187 5 Unmodified _HGTIKNQL_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 64.23631603340823 0.116217441302575 2 {[HG]|PP}T{I|L}KN 6 2 39.765 0.0 0.0 4.3722 0.0 0.0 0.0 256.12916379212203 256.12916379212203 1.9251525939652725 0.0 0.0 0.0 0 0.7971062485323517 0.0 0.850576203518622 0.4247425010840047 + {[HG]|PP}T{I|L}KN 4.3722 + + 500 1 2.099 86350.3 1.0 805 3011 3813 DOHH2_400M_050219_2,3818 DOHH2_400M_050219_2,3818,HGTIKNQL True True HGTIKNQL 18.566356 455.758990466595 862949.5 3813.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF 5.514273961385091 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3821 18.575 60.0 857670.0 25 0 67330.0 + 42509 VTLDSPVLY 9 65 503.774433802364 1005.534314671528 2 503.7743408083916 MULTI CID FTMS 0 0 0 3820 818386.6875 0.0993616465818473 -8 0.1851940155029297 1 Unmodified _VTLDSPVLY_ REV__ENSG00000139112|ENST00000266458|GABARAPL1;REV__ENSG00000170296|ENST00000302386|GABARAP;REV__nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 34.10243960390752 0.1078313939113124 2 VT{I|L}DTTQ[KT] 9 -1 + 84.442 0.0 0.0 8.3977 8.3977 92.92 0.0 0.0 0.0 75.05584110794727 7.459989556713253 7.459989556713253 9.208187539523747 0 0.4247425010840047 2.0 1.2302046884880935 0.4247425010840047 VT{I|L}DTTQ[KT];VT{I|L}DTT[AG][KT];VT{I|L}[WM]Q[KT];VT{I|L}DT[YV]PV;VT{I|L}[WM][AG][KT];{[TV]|[{I|L}S]}[Y{I|L}]TDVPV;[{I|L}T][YV]TD[VP]V 8.3977;7.482;6.8832;6.1759;5.9621;4.7292;2.6443 -;-;-;-;-;-;- 134 + 1 2.099 45014.7 1.0 806 3013 3820 DOHH2_400M_050219_2,3821 DOHH2_400M_050219_2,3821,VTLDSPVLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3822 18.581 331.0 374730.0 25 0 36840.0 + 17533 KPLRNSPEK 9 124 534.8114682784479 1067.6083836236958 2 534.8115112185478 MULTI CID FTMS 0 0 0 3820 260427.4375 0.429755958904378 -8 0.1851940155029297 2 Unmodified _KPLRNSPEK_ REV__ENSG00000054267|ENST00000264183|ARID4B;REV__nc|ENSG00000054267|Q4LE39-2|ARID4B 32.78568957990786 0.1150597335874693 2 KPTMKRQD 8 -1 60.399 0.0 0.0 5.6574 0.0 0.0 0.0 80.0511721246703 80.0511721246703 30.44113273936631 0.0 0.0 0.0 0 1.274227503252014 0.0 0.7302046884880937 0.0 KPTMKRQD 5.6574 - 900 + 1 2.099 96894.9 1.0 807 3013 3820 DOHH2_400M_050219_2,3822 DOHH2_400M_050219_2,3822,KPLRNSPEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3824 18.591 443.0 200950.0 25 0 24118.0 + 6842 EEDGHTHQW 9 124 569.731038539504 1137.4475241458078 2 569.7310668826103 MULTI CID FTMS 0 0 0 3823 187350.125 0.8193159006517269 3 -0.0581340789794921 1 Unmodified _EEDGHTHQW_ ENSG00000127337|ENST00000247843|YEATS4;ENST00000552949.1_1_12:69753653-69756720:+|nuORF 103.82355648334676 0.0089708497247674 2 EED{[HG]|PP}THQW 9 0 + 48.349 0.0 0.0 4.2506 4.2506 75.643 0.0 0.0 0.0 5.449270330613601 5.449270330613601 5.449270330613601 5.449270330613601 0 1.700061205686631 1.6989700043360187 0.0 0.8494850021680094 + + EED{[HG]|PP}THQW;[HT][DG]EEHGAW;[AG]H[C(Carbamidomethyl (C))N]EHGAW;EEDR[{M(Oxidation (M))|F}E]GAW;[HT][DG]EEHQW;[AG]H[C(Carbamidomethyl (C))N]EHQW;EEDRC[TA]EW;EEDR[{M(Oxidation (M))|F}E]QW;EED{[HG]|PP}THWQ;EEDRC{[ET]|[MV]}AW 4.2506;3.7716;3.7203;3.5347;3.4619;3.4106;3.3585;3.2298;3.1685;3.1399 +;-;-;-;-;-;-;-;-;- + 952 + 1 2.099 68654.9 1.0 808 3014 3823 DOHH2_400M_050219_2,3824 DOHH2_400M_050219_2,3824,EEDGHTHQW True True EEDGHTHQW 18.591385 569.73106688261 1646589.25 3823.0 ENST00000552949.1_1_12:69753653-69756720:+|nuORF;;ENSG00000127337|ENST00000247843|YEATS4 8.669573783874512 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3825 18.597 279.0 255400.0 25 0 33595.0 -1 KFAMFITL 8 97 493.7727283181641 985.5309037031284 2 493.7722045779228 MULTI CID FTMS 0 0 0 3823 169481.71875 0.3501026988315611 -6 0.1671581268310547 2 Oxidation (M) _KFAM(Oxidation (M))FITL_ ENSG00000170522|ENST00000302274|ELOVL6 13.50788311687929 0.7113601687236069 2 {[NV]|[RG]}RNVGNT{I|L} 9 -1 + 21.978 0.0 0.0 2.2301 2.2301 76.225 0.0 0.0 0.0 0.7378621416091846 8.790390595936877 0.7378621416091846 9.208187539523752 0 0.1677353201839438 0.0 0.0 0.0 {[NV]|[RG]}RNVGNT{I|L};{[NV]|[RG]}RGGVGNT{I|L};{[NV]|[RG]}RNVGGGT{I|L};{[NV]|[RG]}RGGVGGGT{I|L} 2.2301;1.2957;1.2957;0.36582 -;-;-;- 254 1 2.099 58012.9 1.0 809 3014 3823 DOHH2_400M_050219_2,3825 DOHH2_400M_050219_2,3825,KFAMFITL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3826 18.602 296.0 247180.0 25 0 11558.0 + 29048 QEIDEQRTKY 10 106 437.2172723705695 1308.6299877119084 3 437.2167541384697 MULTI CID FTMS 0 0 0 3823 133490.109375 0.6503254951277923 -3 0.0739040374755859 3 Unmodified _QEIDEQRTKY_ ENSG00000140743|ENST00000268383|CDR2 23.015651743759182 0.4515786786615758 2 QED{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y 7 4 37.127 0.0 0.0 2.8371 0.0 0.0 385.242967674025 0.0 385.242967674025 0.0 9.431890546242345 0.0 0.0 0 0.4247425010840047 0.0 0.805462187404089 0.0 QED{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y 2.8371 - 304 1 2.099 65925.3 1.0 810 3014 3823 DOHH2_400M_050219_2,3826 DOHH2_400M_050219_2,3826,QEIDEQRTKY False True QEIDEQRTKY 18.60193 437.21675413847 779247.5625 3823.0 ENSG00000140743|ENST00000268383|CDR2 6.360174338022868 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3829 18.611 150.0 351390.0 25 0 54733.0 + 15779 ISEDKNPDY 9 91 540.7446609299221 1079.4747689266442 2 540.7437621951103 MULTI CID FTMS 0 0 0 3828 275388.53125 0.7663664951152189 -1 0.003997802734375 1 Unmodified _ISEDKNPDY_ ENSG00000173801|ENST00000393931|JUP 20.41453444215458 0.284085796332423 2 {I|L}SGA[HQ]EN 8 7 50.131 0.0 0.0 4.644 0.0 0.0 0.0 240.0992830865844 240.0992830865844 26.760912590556813 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.5 {I|L}SGA[HQ]EN 4.644 - 768 + 1 2.099 45141.8 1.0 811 3016 3828 DOHH2_400M_050219_2,3829 DOHH2_400M_050219_2,3829,ISEDKNPDY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3830 18.625 800.0 120960.0 25 0 15083.0 -1 0 76 527.0595369676277 2630.261302505138 5 527.2605468630791 MULTI CID FTMS 0 0 0 3828 81123.8828125 1.0 0 0.0 2 2 GW 2 -1 22.206 0.0 0.0 0.84426 0.0 0.0 2369.1509337080665 0.0 2369.1509337080665 0.0 6.721675119240516 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 GW 0.84426 - 105 + 1 2.099 82299.1 0.550000011920929 812 3016 3828 DOHH2_400M_050219_2,3830 DOHH2_400M_050219_2,3830, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3831 18.639 800.0 100060.0 25 0 7446.6 -1 0 69 628.784944611671 2511.110672580284 4 629.0368530154228 MULTI CID FTMS 0 0 0 3828 70846.2109375 0.2152536472452335 -7 0.1882171630859375 3 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PHHD 7 -1 21.03 0.0 0.0 0.83747 0.0 0.0 0.0 1664.7221113062603 1664.7221113062603 14.04016417036189 0.0 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PHHD 0.83747 - 122 1 2.099 64046.1 0.550000011920929 813 3016 3828 DOHH2_400M_050219_2,3831 DOHH2_400M_050219_2,3831, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3834 18.648 28.0 1792200.0 25 0 243510.0 + + 17593 KPTGARPSAL 10 57 499.29295336604406 996.571353798888 2 499.2931396365166 MULTI CID FTMS 0 0 0 3833 1874858.375 0.0121593640570427 33 -0.7453098297119141 1 Unmodified _KPTAAFHLL_ ENST00000473611.5_1_6:33247055-33247262:-|nuORF;ENSG00000227057|ENST00000374617|WDR46 16.942295170755138 0.3780752226737986 2 KPTG 4 -1 45.433 0.0 0.0 4.5589 0.0 0.0 0.0 610.3291720025999 610.3291720025999 42.33410649039925 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTG 4.5589 - 21 + 1 2.1 45107.3 1.0 814 3018 3833 DOHH2_400M_050219_2,3834 DOHH2_400M_050219_2,3834,KPTAAFHLL False False KPTGARPSAL 18.647897 499.293139636517 2710582656.0 3833.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 7.215451558430989 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3835 18.652 204.0 283320.0 25 0 21638.0 + 7213 EEQTPQNKI 9 86 543.7747901090955 1085.535027284991 2 543.7748901247978 MULTI CID FTMS 0 0 0 3833 236348.625 0.2996755820195507 -3 0.0411834716796875 2 Unmodified _EEQTPQNKI_ ENSG00000134333|ENST00000422447|LDHA;ENST00000469976.2_1_11:18418389-18418551:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA 36.12702656103203 0.0967173616627612 2 [AG]PNK 5 6 27.105 0.0 0.0 2.4969 0.0 0.0 0.0 615.2633652579003 615.2633652579003 -2.7450373522096427 0.0 -2.7450373522096427 0.0 0 0.0 2.0 0.0 0.3807196863200844 [AG]PNK 2.4969 - 269 1 2.1 50736.0 1.0 815 3018 3833 DOHH2_400M_050219_2,3835 DOHH2_400M_050219_2,3835,EEQTPQNKI True True EEQTPQNKI 18.651786 543.774890124798 3158719.0 3833.0 nc|ENSG00000134333|P00338-4|LDHA;;nc|ENSG00000134333|P00338-3|LDHA;;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;;ENST00000469976.2_1_11:18418389-18418551:+|nuORF;;nc|ENSG00000134333|P00338-2|LDHA;;nc|ENSG00000134333|P00338-5|LDHA;;ENSG00000134333|ENST00000422447|LDHA 6.740885575612386 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3836 18.666 800.0 134140.0 25 0 10998.0 -1 0 65 609.7004647629508 3043.465941481754 5 609.9008666872978 MULTI CID FTMS 0 0 0 3833 86181.6796875 1.0 0 0.0 3 2 YTH 3 -1 14.693 0.0 0.0 0.48276 0.0 0.0 1843.9372707041907 795.3393038385374 2639.276574542728 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YTH 0.48276 - 22 + 1 2.1 86349.7 0.6200000047683716 816 3018 3833 DOHH2_400M_050219_2,3836 DOHH2_400M_050219_2,3836, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3839 18.686 800.0 162770.0 25 0 25257.0 + 30603 REYEAQQQY 9 101 607.7755241215291 1213.536495309858 2 607.7756835818291 MULTI CID FTMS 0 0 0 3838 115745.09375 0.6342237099789845 -1 0.0039520263671875 1 Unmodified _REYEAQQQY_ ENSG00000161204|ENST00000429586|ABCF3;ENST00000468892.5_1_3:183907488-183910505:+|nuORF;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;nc|ENSG00000161204|Q9NUQ8-2|ABCF3 53.40400417844725 0.0329064971918313 2 [AG]QY{[SA]|[TG]}AQQQY 11 5 + 77.451 0.0 0.0 6.3822 6.3822 79.647 0.0 0.0 0.0 8.953953402936477 16.575773191777927 8.953953402936477 1.989700043360188 0 0.8807196863200843 1.6989700043360187 0.555462187404089 1.5189301784845295 [AG]QY{[SA]|[TG]}AQQQY;[AG]YQ{[SA]|[TG]}AQQQY;[AG]QY[QT]QQQY;[AG]YQ[QT]QQQY;[AG]AGY{[SA]|[TG]}AQQQY;[YE]REAQQQY;[AG]QYP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QQY;[AG]QY{[SA]|[TG]}AQQ[AG]Y;[AG]QY{[SA]|[TG]}A[AG]QQY;[AG]QY{[SA]|[TG]}AQ[AG]QY 6.3822;6.2183;6.0884;5.9245;5.781;5.6444;5.6343;5.63;5.63;5.63 -;-;-;-;-;-;-;-;-;- 2633 1 2.1 98362.4 0.6700000166893005 817 3020 3838 DOHH2_400M_050219_2,3839 DOHH2_400M_050219_2,3839,REYEAQQQY True True REYEAQQQY 18.685943 607.775683581829 787943.1875 3838.0 ENST00000468892.5_1_3:183907488-183910505:+|nuORF;;ENSG00000161204|ENST00000429586|ABCF3;;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;;nc|ENSG00000161204|Q9NUQ8-2|ABCF3 7.825995604197184 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3840 18.692 326.0 177180.0 25 0 18030.0 + 31937 RVDENNPEY 9 68 568.2541873825722 1134.4938218319444 2 568.2552978396416 MULTI CID FTMS 0 0 0 3838 132943.375 0.8327299700737435 3 -0.1109962463378906 2 Unmodified _RVDENNPEY_ ENSG00000087274|ENST00000683351|ADD1;ENST00000503169.5_1_4:2877642-2906862:+|nuORF;ENST00000508684.5_1_4:2877642-2900342:+|nuORF;ENST00000509039.5_1_4:2877642-2901297:+|nuORF;ENST00000540541.1_1_4:2877642-2877930:+|nuORF;nc|ENSG00000087274|P35611-2|ADD1;nc|ENSG00000087274|P35611-3|ADD1;nc|ENSG00000087274|P35611-4|ADD1;nc|ENSG00000087274|P35611-5|ADD1;nc|ENSG00000087274|P35611-6|ADD1;nc|ENSG00000087274|P35611|ADD1 40.23920728925047 0.0741434193262949 2 ENNPEY 6 3 44.914 0.0 0.0 3.959 0.0 0.0 370.1964283673844 0.0 370.1964283673844 0.0 21.982522177562203 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.4247425010840047 + ENNPEY 3.959 + + 77 1 2.1 52616.4 1.0 818 3020 3838 DOHH2_400M_050219_2,3840 DOHH2_400M_050219_2,3840,RVDENNPEY True True RVDENNPEY 18.691876 568.255297839642 720164.6875 3838.0 nc|ENSG00000087274|P35611-3|ADD1;;ENST00000508684.5_1_4:2877642-2900342:+|nuORF;;nc|ENSG00000087274|P35611|ADD1;;ENST00000540541.1_1_4:2877642-2877930:+|nuORF;;nc|ENSG00000087274|P35611-6|ADD1;;ENSG00000087274|ENST00000683351|ADD1;;ENST00000503169.5_1_4:2877642-2906862:+|nuORF;;nc|ENSG00000087274|P35611-4|ADD1;;nc|ENSG00000087274|P35611-5|ADD1;;ENST00000509039.5_1_4:2877642-2901297:+|nuORF;;nc|ENSG00000087274|P35611-2|ADD1 7.889115651448567 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3841 18.694 117.0 489720.0 25 0 98203.0 -1 0 64 422.2051989566549 421.1979224900549 1 422.2039977908134 MULTI CID FTMS 0 0 0 3838 452552.9375 0.1917865978462871 10 -0.2994403839111328 3 2 {I|L} 1 -1 10.837 0.0 0.0 2.573 0.0 0.0 290.1030413638814 0.0 290.1030413638814 0.0 10.837455436468815 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.573 - 5 + 1 2.1 48774.2 1.0 819 3020 3838 DOHH2_400M_050219_2,3841 DOHH2_400M_050219_2,3841, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3842 18.708 800.0 86052.0 25 0 9144.9 + 19207 LEGEESRMSGE 11 86 612.263735878014 1222.512918822828 2 612.2637817263603 MULTI CID FTMS 0 0 0 3838 85378.734375 1.0 0 0.0 4 Unmodified _LEGEESRMSGE_ CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__Q7Z794;ENSG00000167768|ENST00000252244|KRT1;ENSG00000189182|ENST00000341809|KRT77 51.487983226225225 0.1093896055713593 2 {I|L}EGEES 6 5 72.484 0.0 0.0 5.9291 0.0 0.0 0.0 575.2262056940061 575.2262056940061 58.098200670105406 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.8494850021680094 0.0 + {I|L}EGEES 5.9291 + + 147 + 1 2.1 56891.1 0.6000000238418579 820 3020 3838 DOHH2_400M_050219_2,3842 DOHH2_400M_050219_2,3842,LEGEESRMSGE True True LEGEESRMSGE 18.708151 612.26378172636 293135.75 3838.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253 6.98585319519043 2.0 True 11.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 3844 18.714 165.0 423820.0 25 0 61689.0 28075 PPHPPPPPP 9 85 466.7537567423312 931.4929605514624 2 466.7531616091728 MULTI CID FTMS 0 0 0 3843 298832.90625 0.778259461245537 4 -0.1418914794921875 1 Unmodified _PPHPPPPPP_ ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000066855|ENST00000262146|MTFR1;ENSG00000163064|ENST00000295206|EN1;ENSG00000175879|ENST00000313173|HOXD8;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000066855|Q15390-2|MTFR1;nc|ENSG00000175879|P13378-2|HOXD8;REV__nc|ENSG00000182095|O15417-2|TNRC18 45.7499826716795 0.0496882803020414 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK] 8 3 + 36.419 0.0 0.0 3.9098 3.9098 68.98 0.0 0.0 0.0 0.796896906561031 2.9761469314082944 0.796896906561031 0.796896906561031 0 0.9247425010840048 0.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK];{[HG]|PP}HPPP[YK];{[TV]|[{I|L}S]}VEPP[YK];{[NV]|[RG]}{[QS]|[NT]}PP[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]P[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YK][YK];{[HG]|PP}H[YK][YK];{[TV]|[{I|L}S]}V[WH][YK] 3.9098;3.8242;3.4462;1.986;1.4463;1.0759;0.99035;0.61227 -;-;-;-;-;-;-;- 97 1 2.1 61030.2 1.0 821 3021 3843 DOHH2_400M_050219_2,3844 DOHH2_400M_050219_2,3844,PPHPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3845 18.719 288.0 243320.0 25 0 19097.0 + 42403 VTEDGNQHVY 10 96 581.2622787175308 1160.5100045018614 2 581.2620117068291 MULTI CID FTMS 0 0 0 3843 323457.09375 0.2023944650129074 -4 0.0689926147460937 2 Unmodified _VTEDGNQHVY_ ENSG00000121350|ENST00000240651|PYROXD1;nc|ENSG00000121350|Q8WU10-2|PYROXD1 66.45667989310934 0.0196491505995134 2 VTED[NG]QHVY 10 0 + 70.155 0.0 0.0 6.0452 6.0452 90.271 0.0 0.0 0.0 36.945830421822656 5.914697515349943 5.914697515349943 15.158263347939211 0 0.7429928190999391 2.0 0.805462187404089 0.4247425010840047 + + VTED[NG]QHVY;VT[Y{M(Oxidation (M))|F}]DV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS];VT[Y{M(Oxidation (M))|F}]VD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS];VT[QA]Q[C(Carbamidomethyl (C))K]D[DP];VTPTYY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS];{[DS]|[MA]|[CV]|TT}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VDETYV;{[DS]|[MA]|[CV]|TT}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVETYV;{[DS]|[MA]|[CV]|TT}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VDEYTV;{[DS]|[MA]|[CV]|TT}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DEVTYV;{[DS]|[MA]|[CV]|TT}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVEYTV 6.0452;4.739;4.5873;4.5592;3.8591;3.1212;2.9694;2.9694;2.8864;2.8177 +;-;-;-;-;-;-;-;-;- + 1100 + 1 2.1 61504.2 1.0 822 3021 3843 DOHH2_400M_050219_2,3845 DOHH2_400M_050219_2,3845,VTEDGNQHVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3846 18.731 671.0 158080.0 25 0 8728.8 + 11034 GAYREHPYGRY 11 99 456.88633621166593 1367.637179235198 3 456.8866760134697 MULTI CID FTMS 0 0 0 3843 129916.3046875 1.0 0 0.0 3 Unmodified _GAYREHPYGRY_ ENSG00000121774|ENST00000327300|KHDRBS1;ENST00000307714.12_1_1:32503693-32508222:+|nuORF;nc|ENSG00000121774|Q07666-2|KHDRBS1;nc|ENSG00000121774|Q07666-3|KHDRBS1 22.10888232116614 0.5730793465041294 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VP]EQPTY{M(Oxidation (M))|F}Q 11 9 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VP]EQ + + 26.755 17.826 2.499 1.9563 1.9563 47.437 0.0 0.0 0.0 0.0 8.929228958030265 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4634679910804404 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VP]EQPTY{M(Oxidation (M))|F}Q 1.9563 - 386 + 1 2.1 85487.8 1.0 823 3021 3843 DOHH2_400M_050219_2,3846 DOHH2_400M_050219_2,3846,GAYREHPYGRY False True GAYREHPYGRY 18.730826 456.88667601347 578040.75 3843.0 nc|ENSG00000121774|Q07666-3|KHDRBS1;;ENST00000307714.12_1_1:32503693-32508222:+|nuORF;;ENSG00000121774|ENST00000327300|KHDRBS1;;nc|ENSG00000121774|Q07666-2|KHDRBS1 7.193957646687825 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3847 18.745 800.0 156700.0 25 0 30383.0 + 8500 ETDPDAQAKAY 11 108 604.775136987943 1207.535721042686 2 604.7744628787041 MULTI CID FTMS 0 0 0 3843 103924.6328125 0.6631212571432445 -1 0.0385341644287109 4 Unmodified _ETDPDAQAKAY_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 38.61474834105838 0.2337350513322792 2 [DP]AQAKAD 8 4 48.781 0.0 0.0 4.0397 0.0 0.0 0.0 408.1403102362985 408.1403102362985 -5.807405842248848 0.0 -5.807405842248848 0.0 0 0.5138793319624578 1.3979400086720375 1.1861818737241734 0.3054621874040891 [DP]AQAKAD 4.0397 - 1592 1 2.1 93499.5 0.5400000214576721 824 3021 3843 DOHH2_400M_050219_2,3847 DOHH2_400M_050219_2,3847,ETDPDAQAKAY False True ETDPDAQAKAY 18.744657 604.774462878704 617051.125 3843.0 ENSG00000132004|ENST00000393261|FBXW9;;nc|ENSG00000132004|Q5XUX1-2|FBXW9 8.398360252380371 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3849 18.761 800.0 133050.0 25 0 22159.0 + 38586 TTDKKSLAY 9 115 513.7785735461415 1025.542594159083 2 513.7764770388603 MULTI CID FTMS 0 0 0 3848 63770.76171875 0.595990603061489 1 -0.0359020233154296 1 Unmodified _TTDKKSLAY_ ENSG00000065243|ENST00000370521|PKN2;nc|ENSG00000065243|Q16513-2|PKN2;nc|ENSG00000065243|Q16513-3|PKN2 32.037481411007896 0.1235546156350648 2 TTDK 4 5 44.031 0.0 0.0 4.2934 0.0 0.0 0.0 577.2976168268186 577.2976168268186 10.833395677986758 0.0 0.0 0.0 0 0.5269763493273799 1.5228787452803376 0.0 0.0 + TTDK 4.2934 + + 197 + 1 2.1 88542.2 0.5299999713897705 825 3022 3848 DOHH2_400M_050219_2,3849 DOHH2_400M_050219_2,3849,TTDKKSLAY True True TTDKKSLAY 18.761036 513.77647703886 324903.0 3848.0 nc|ENSG00000065243|Q16513-2|PKN2;;nc|ENSG00000065243|Q16513-3|PKN2;;ENSG00000065243|ENST00000370521|PKN2 5.136133193969727 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3850 18.767 313.0 570650.0 25 0 83803.0 + 2700 ATELKNNSY 9 152 520.2566114745786 1038.498670015957 2 520.2570068240166 MULTI CID FTMS 0 0 0 3848 229538.1875 0.2657486308841734 -4 0.1015453338623046 2 Unmodified _ATELKNNSY_ ENSG00000100353|ENST00000216190|EIF3D;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 92.65332237495696 0.0139087009896299 2 [TA]E{I|L}K[WE]Y 8 3 + 61.665 0.0 0.0 5.9379 5.9379 89.576 0.0 0.0 0.0 35.29590467528031 4.054556341805764 4.054556341805764 13.73371817181301 0 0.9436726795685342 1.6989700043360187 0.6505149978319906 1.110924374808178 [TA]E{I|L}K[WE]Y;[TA]E{I|L}K{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[PS];[TA]E{I|L}S[HV]E[PG];[TA]E[HV]S{I|L}A[DP];{NN|[MP]|[D{I|L}]|[EV]}[HM]K{I|L}E[PG];{[DS]|[MA]|[CV]|TT}H{[RE]|[WV]}{I|L}E[PG];[TA]E{I|L}[RD]Y[TA];[TA]E[VG]{[QN]|[E{I|L}]|[KN]}H[PS];[TA]E[YV]RE[TA];[DP]{[NV]|[RG]}[QA]{I|L}E[PG] 5.9379;4.6155;4.0625;3.99;3.2694;3.0998;2.9414;2.781;2.592;2.4471 -;-;-;-;-;-;-;-;-;- 792 + 1 2.1 140975.8 1.0 826 3022 3848 DOHH2_400M_050219_2,3850 DOHH2_400M_050219_2,3850,ATELKNNSY True True ATELKNNSY 18.766744 520.257006824017 4313334.5 3848.0 nc|ENSG00000100353|O15371-2|EIF3D;;ENSG00000100353|ENST00000216190|EIF3D;;nc|ENSG00000100353|O15371-3|EIF3D;;ENST00000462641.1_1_22:36907036-36908721:-|nuORF 6.417841116587321 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3851 18.781 800.0 172590.0 25 0 6893.3 + 26145 NPTIKPHSV 9 161 496.7801790804266 991.5458052276532 2 496.7803222537041 MULTI CID FTMS 0 0 0 3848 136661.78125 0.582688405896067 -3 0.0790462493896484 3 Unmodified _NPTIKPHSV_ ENSG00000102606|ENST00000646102|ARHGEF7;nc|ENSG00000102606|Q14155-1|ARHGEF7;nc|ENSG00000102606|Q14155-2|ARHGEF7;nc|ENSG00000102606|Q14155-3|ARHGEF7;nc|ENSG00000102606|Q14155-5|ARHGEF7;nc|ENSG00000102606|Q14155-6|ARHGEF7;nc|ENSG00000102606|Q14155|ARHGEF7 92.65332237495696 0.0139087009896299 2 NPT{I|L}KPHSV 9 0 + 100.3 0.0 0.0 10.115 10.115 96.751 0.0 0.0 0.0 14.648867983026506 15.327864138797594 14.648867983026506 15.327864138797594 0 0.6861818737241735 1.3979400086720375 2.0563342693655446 0.0 + + NPT{I|L}KPHSV;NPT{I|L}KP[VS]H;NPT{I|L}K[HS]VP;NPT{I|L}K[HS]PV;[NP]{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};[NP]{[QV]|[N{I|L}]|[RA]|[KV]}K[VP]PN;[NP]{[QV]|[N{I|L}]|[RA]|[KV]}K{[HG]|PP}VN;[QT][VP]KPHSV;[NP]{[QV]|[N{I|L}]|[RA]|[KV]}K[RH]N;[{I|L}T][HS]K{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 10.115;8.5694;6.825;6.6552;4.1257;3.8908;3.7132;3.6782;3.541;3.0069 +;-;-;-;-;-;-;-;-;- + 1234 + 1 2.1 108921.0 0.5799999833106995 827 3022 3848 DOHH2_400M_050219_2,3851 DOHH2_400M_050219_2,3851,NPTIKPHSV True True NPTIKPHSV 18.780559 496.780322253704 2777382.0 3848.0 nc|ENSG00000102606|Q14155-2|ARHGEF7;;nc|ENSG00000102606|Q14155-6|ARHGEF7;;nc|ENSG00000102606|Q14155-1|ARHGEF7;;nc|ENSG00000102606|Q14155-5|ARHGEF7;;nc|ENSG00000102606|Q14155|ARHGEF7;;nc|ENSG00000102606|Q14155-3|ARHGEF7;;ENSG00000102606|ENST00000646102|ARHGEF7 7.379268805185954 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3853 18.797 800.0 63614.0 25 0 8540.9 + -1 FWYNCWCYLPN 11 71 811.8322025176512 1621.6498521021024 2 811.8322631716728 MULTI CID FTMS 0 0 0 3852 136436.96875 0.2342330650604989 4 -0.1032066345214843 1 2 Carbamidomethyl (C) _FWYNC(Carbamidomethyl (C))WC(Carbamidomethyl (C))YLPN_ REV__ENST00000272542.7_1_2:113404910-113405027:+|nuORF 1.3295316138638542 0.8688751186870782 2 Q{[QS]|[NT]}STQ 6 -1 49.64 0.0 0.0 3.0611 0.0 0.0 944.3515865765148 0.0 944.3515865765148 0.0 4.769987279362624 0.0 0.0 0 0.5 0.0 1.5 0.75 Q{[QS]|[NT]}STQ 3.0611 - 527 + 1 2.1 40534.2 0.6299999952316284 828 3023 3852 DOHH2_400M_050219_2,3853 DOHH2_400M_050219_2,3853,FWYNCWCYLPN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3854 18.811 800.0 134370.0 25 0 6292.9 -1 0 71 632.7836611903622 2527.1055388950485 4 633.0347778201103 MULTI CID FTMS 0 0 0 3852 94028.9921875 0.9133926491223676 1 -0.039438247680664 2 2 DD 2 -1 17.959 0.0 0.0 0.71065 0.0 0.0 744.3319858352826 1549.697642610962 2294.0296284462447 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 DD 0.71065 - 75 + 1 2.1 83016.2 0.5099999904632568 829 3023 3852 DOHH2_400M_050219_2,3854 DOHH2_400M_050219_2,3854, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3855 18.82 522.0 194450.0 25 0 57904.0 + 7058 EELKQQQKL 9 103 572.3249908350288 0 572.3244506716728 PEAK CID FTMS 0 0 0 3852 135036.953125 0.5898943797835174 -2 0.0724620819091796 3 Unmodified _EELHLIVYK_ nc|ENSG00000163938|Q9BVP2-2|GNL3;ENST00000496254.5_1_3:52720087-52724795:+|nuORF;ENST00000462550.5_1_3:52720108-52721634:+|nuORF;ENSG00000163938|ENST00000418458|GNL3;ENST00000468146.5_1_3:52720039-52723083:+|nuORF;ENST00000492349.5_1_3:52720087-52722217:+|nuORF 15.248480904072842 0.2520662914010398 2 {I|L}KA 3 8 23.188 0.0 0.0 2.0293 0.0 0.0 258.0874796006555 569.2997530572874 827.3872326579428 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}KA 2.0293 - 123 + 1 2.1 83101.8 1.0 830 3023 3852 DOHH2_400M_050219_2,3855 DOHH2_400M_050219_2,3855,EELHLIVYK False False EELKQQQKL 18.819986 572.324450671673 1812920.125 3852.0 nc|ENSG00000163938|Q9BVP2-2|GNL3;;ENST00000496254.5_1_3:52720087-52724795:+|nuORF;;ENST00000462550.5_1_3:52720108-52721634:+|nuORF;;ENSG00000163938|ENST00000418458|GNL3;;ENST00000468146.5_1_3:52720039-52723083:+|nuORF;;ENST00000492349.5_1_3:52720087-52722217:+|nuORF 1.3015674849351246 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3857 18.837 800.0 104990.0 25 0 13977.0 6735 EDLLSPPQDT 10 92 557.7651846066451 0 557.7657348513603 PEAK CID FTMS 0 0 0 3856 58966.15625 0.6119883807906008 1 -0.0299911499023437 1 Unmodified _EDLLSPPQDT_ ENSG00000198947|ENST00000357033|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532-12|DMD;nc|ENSG00000198947|P11532-13|DMD;nc|ENSG00000198947|P11532-14|DMD;nc|ENSG00000198947|P11532-15|DMD;nc|ENSG00000198947|P11532-16|DMD;nc|ENSG00000198947|P11532-17|DMD;nc|ENSG00000198947|P11532-2|DMD;nc|ENSG00000198947|P11532-3|DMD;nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532-5|DMD;nc|ENSG00000198947|P11532-6|DMD;nc|ENSG00000198947|P11532-7|DMD;nc|ENSG00000198947|P11532-8|DMD;nc|ENSG00000198947|P11532-9|DMD;nc|ENSG00000198947|P11532|DMD 18.1463463914782 0.3130158145628772 2 K{M(Oxidation (M))|F}TT 4 9 18.36 0.0 0.0 1.6488 0.0 0.0 97.9683646931498 535.2920626275999 633.2604273207497 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 K{M(Oxidation (M))|F}TT 1.6488 - 73 + 1 2.1 69025.9 0.5199999809265137 831 3024 3856 DOHH2_400M_050219_2,3857 DOHH2_400M_050219_2,3857,EDLLSPPQDT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3858 18.84 133.0 492690.0 25 0 36410.0 + 32742 SEDEIKKAY 9 84 541.7725969134968 1081.5306408937936 2 541.7722656130791 MULTI CID FTMS 0 0 0 3856 367551.78125 0.640537210840371 -3 0.1119003295898437 2 Unmodified _SEDEIKKAY_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 55.50274090549119 0.0285720310785888 2 {[ES]|[DT]|[{I|L}C]}DE{I|L}KKAY 9 0 + 64.051 0.0 0.0 5.9223 5.9223 90.532 0.0 0.0 0.0 38.431087926598266 14.09256854528806 14.09256854528806 18.735899786366232 0 2.1989700043360187 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}DE{I|L}KKAY;Y[C(Carbamidomethyl (C))H]{I|L}KKAY;Y[HD]{[SA]|[TG]}KKAY;{[ES]|[DT]|[{I|L}C]}[QA]{[SA]|[TG]}KKAY;[K{I|L}]K[C(Carbamidomethyl (C))H]YAY;KK{I|L}[C(Carbamidomethyl (C))H]YAY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KKA{[ES]|[DT]|[{I|L}C]}Y;[K{I|L}]K[DG][C(Carbamidomethyl (C))Q]AY;KKA[DV][C(Carbamidomethyl (C))Q]AY;KK{I|L}[DG][C(Carbamidomethyl (C))Q]AY 5.9223;4.1899;2.8924;2.3193;2.0018;1.7074;1.6401;1.6314;1.4525;1.3369 +;-;-;-;-;-;-;-;-;- + 200 + 1 2.1 57732.1 1.0 832 3024 3856 DOHH2_400M_050219_2,3858 DOHH2_400M_050219_2,3858,SEDEIKKAY True True SEDEIKKAY 18.839927 541.772265613079 4632717.0 3856.0 ENSG00000168259|ENST00000457167|DNAJC7;;nc|ENSG00000168259|Q99615-2|DNAJC7 6.9015272458394366 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3859 18.842 123.0 598470.0 25 0 31163.0 + 32743 SEDEIKKAY 9 109 361.5173419937163 1081.530196581349 3 361.5168945193291 MULTI CID FTMS 0 0 0 3856 340006.03125 0.6425605797494484 -3 0.1119003295898437 3 Unmodified _SEDEIKKAY_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 49.93300154707207 0.0405168250806675 2 SEDKNKKAY 9 2 + 66.99 0.0 0.0 6.194 6.194 78.284 0.0 0.0 0.0 46.02101537344056 14.092568545288067 14.092568545288067 1.331596456423739 0 0.7198565171985376 2.0 0.5 0.0 SEDKNKKAY;SEY{[HG]|PP}KKAY;SEDK{I|L}EKAY;SEDKGGKKAY;SEDKN{M(Oxidation (M))|F}[KS]K;SEY{[HG]|PP}{M(Oxidation (M))|F}[KS]K;SEY[WR][DV]K;SWW{I|L}EKAY;SWWNKKAY;SWWGGKKAY 6.194;6.0709;5.9157;5.3426;4.2356;4.1125;3.8284;2.9923;2.8083;1.952 -;-;-;-;-;-;-;-;-;- 233 + 1 2.1 65347.9 1.0 833 3024 3856 DOHH2_400M_050219_2,3859 DOHH2_400M_050219_2,3859,SEDEIKKAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3860 18.85 423.0 325000.0 25 0 29081.0 -1 CRCCCYLFHCC 11 141 381.8839323094557 1523.5066233714228 4 381.8838073611259 MULTI CID FTMS 0 0 0 3856 143684.625 1.0 0 0.0 4 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))RC(Carbamidomethyl (C))C(Carbamidomethyl (C))CYLFHCC_ nc|ENSG00000214447|A6NFU0|FAM187A 0.0 0.8751479354844584 2 [AG]K{I|L}EQK{I|L} 8 -1 31.181 0.0 0.0 2.0467 0.0 0.0 0.0 652.964823376747 652.964823376747 17.943178116916805 0.0 0.0 0.0 0 0.0 1.0 0.9476212463643424 1.0114393726401687 [AG]K{I|L}EQK{I|L} 2.0467 - 571 1 2.1 111786.6 1.0 834 3024 3856 DOHH2_400M_050219_2,3860 DOHH2_400M_050219_2,3860,CRCCCYLFHCC False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 3862 18.855 36.0 1246900.0 25 0 91271.0 + 42510 VTLDSPVLY 9 74 503.774433802364 1005.534314671528 2 503.7743713259697 MULTI CID FTMS 0 0 0 3861 1216611.875 0.1477108083469754 4 -0.1150054931640625 1 Unmodified _VTLDSPVLY_ REV__ENSG00000139112|ENST00000266458|GABARAPL1;REV__ENSG00000170296|ENST00000302386|GABARAP;REV__nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 26.88365393820708 0.1891292719743517 2 VT{I|L}DTTQTK 9 -1 + 79.541 0.0 0.0 7.9103 7.9103 91.674 0.0 0.0 0.0 67.94707835226156 14.710536658395128 14.710536658395128 9.208187539523736 0 0.4247425010840047 2.0 0.9247425010840048 0.3807196863200844 VT{I|L}DTTQTK;VT{I|L}DTT[AG]TK;VT{I|L}[WM]QTK;VT{I|L}[WM][AG]TK;VT{I|L}[RN][{I|L}T][CS] 7.9103;6.9946;6.4746;5.5534;4.5357 -;-;-;-;- 160 + 1 2.1 40891.4 1.0 835 3025 3861 DOHH2_400M_050219_2,3862 DOHH2_400M_050219_2,3862,VTLDSPVLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3863 18.864 544.0 268000.0 25 0 22993.0 17718 KPVGFTVHAI 10 98 534.8114682784479 1067.6083836236958 2 534.8114501833916 MULTI CID FTMS 0 0 0 3861 184148.46875 0.3038808142802893 4 -0.1150054931640625 2 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 18.1463463914782 0.5430639438673815 2 KPTGAP 6 6 48.136 0.0 0.0 4.5088 0.0 0.0 0.0 513.2718599908811 513.2718599908811 32.955393291053525 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTGAP 4.5088 - 222 + 1 2.1 115579.8 1.0 836 3025 3861 DOHH2_400M_050219_2,3863 DOHH2_400M_050219_2,3863,KPVGFTVHAI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3865 18.875 451.0 173150.0 25 0 19243.0 + 31752 RSDDSGHLY 9 75 525.2354254018726 1048.456297870545 2 525.2357055544853 MULTI CID FTMS 0 0 0 3864 117488.6640625 0.7648952546792557 1 -0.0194282531738281 1 Unmodified _RSDDSGHLY_ ENST00000555806.5_1_12:97313883-97318704:+|nuORF 15.248480904072842 0.4239247793462406 2 SGH{I|L}Y 5 4 36.67 0.0 0.0 3.4975 0.0 0.0 473.18660170722814 0.0 473.18660170722814 0.0 26.75534203253536 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + SGH{I|L}Y 3.4975 + + 142 1 2.1 63590.1 1.0 837 3026 3864 DOHH2_400M_050219_2,3865 DOHH2_400M_050219_2,3865,RSDDSGHLY False True RSDDSGHLY 18.874894 525.235705554485 697801.6875 3864.0 ENST00000555806.5_1_12:97313883-97318704:+|nuORF 4.711962540944417 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3866 18.879 216.0 391780.0 25 0 86984.0 35254 SSFHCLYQY 9 92 383.1668993344252 1146.4788686034756 3 383.1673156619072 MULTI CID FTMS 0 0 0 3864 236512.9375 0.3927990299308113 -4 0.1196804046630859 2 Unmodified _SSFHCLYQY_ ENSG00000186103|ENST00000334384|ARGFX 7.101721422024254 0.6667666702315642 2 SSDK 4 7 40.398 0.0 0.0 3.5237 0.0 0.0 0.0 726.2724636652913 726.2724636652913 25.79410299434249 0.0 0.0 0.0 0 0.5941876774005248 1.154901959985743 0.0 0.0 SSDK 3.5237 - 69 + 1 2.1 72285.6 1.0 838 3026 3864 DOHH2_400M_050219_2,3866 DOHH2_400M_050219_2,3866,SSFHCLYQY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3867 18.884 259.0 248830.0 25 0 26003.0 26872 PDCFGKKSQM 10 103 380.8445751641975 1139.5118960927923 3 380.8450195193291 MULTI CID FTMS 0 0 0 3864 157886.875 0.7051200819061262 -2 0.0443401336669921 3 Unmodified _PDCFGKKSQM_ ENST00000565541.5_1_16:71512220-71516155:-|nuORF 5.296884461304476 0.7021353017287152 2 [{M(Oxidation (M))|F}E]{[{M(Oxidation (M))|F}H]|[RQ]}SKQSM 9 6 [{M(Oxidation (M))|F}E]{[{M(Oxidation (M))|F}H]|[RQ]}SKQ + + 16.752 9.9654 1.1031 1.4701 1.4701 47.081 0.0 0.0 0.0 0.0 -5.466871281744695 -5.466871281744695 0.0 0 0.0 0.0 0.1803115997617927 0.0 [{M(Oxidation (M))|F}E]{[{M(Oxidation (M))|F}H]|[RQ]}SKQSM 1.4701 - 117 + 1 2.1 54788.8 1.0 839 3026 3864 DOHH2_400M_050219_2,3867 DOHH2_400M_050219_2,3867,PDCFGKKSQM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3869 18.896 492.0 257250.0 25 0 17928.0 -1 0 74 628.784944611671 2511.110672580284 4 629.0356323122978 MULTI CID FTMS 0 0 0 3868 150249.59375 0.4565067436045919 4 -0.1011009216308593 1 2 [R{M(Oxidation (M))|F}]PGRDD 7 -1 31.999 0.0 0.0 1.2743 0.0 0.0 0.0 1664.7226203729251 1664.7226203729251 19.040616466225444 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.4247425010840047 [R{M(Oxidation (M))|F}]PGRDD 1.2743 - 189 1 2.102 98565.5 1.0 840 3027 3868 DOHH2_400M_050219_2,3869 DOHH2_400M_050219_2,3869, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3870 18.91 800.0 198700.0 25 0 11329.0 + 34528 SPAIKKQL 8 155 442.7818387022057 883.5491244712114 2 442.7816039919853 MULTI CID FTMS 0 0 0 3868 142424.890625 0.6412224797219004 -3 0.0637683868408203 2 Unmodified _SPAIKKQL_ ENSG00000145041|ENST00000684031|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;nc|ENSG00000145041|Q9Y4B6-3|DCAF1 92.4914307365334 0.0626417082128876 2 SPA{I|L}KKQ{I|L} 8 0 + 97.006 0.0 0.0 10.979 10.979 90.167 0.0 0.0 0.0 34.02320021891711 6.274216801617115 6.274216801617115 6.274216801617115 0 1.9731975075880328 2.0 0.0 1.360924374808178 + + SPA{I|L}KKQ{I|L};SPA{I|L}KK{I|L}Q;SPA{I|L}KK[AG]{I|L};[PS]A{I|L}KKQ{I|L};[PS]A{I|L}KK[AG]{I|L};[PA]S{I|L}KKQ{I|L};[PA]S{I|L}KK[AG]{I|L};KK{I|L}QAPS{I|L};KK{I|L}AGAPS{I|L};[VG]RRRQ{I|L} 10.979;10.269;9.5851;7.1284;6.0801;5.0117;3.9634;3.4173;3.3594;3.246 +;-;-;+;-;-;-;-;-;- + 620 + 1 2.102 123731.1 0.550000011920929 841 3027 3868 DOHH2_400M_050219_2,3870 DOHH2_400M_050219_2,3870,SPAIKKQL True True SPAIKKQL 18.910156 442.781603991985 918012.625 3868.0 nc|ENSG00000145041|Q9Y4B6-2|DCAF1;;nc|ENSG00000145041|Q9Y4B6-3|DCAF1;;ENSG00000145041|ENST00000684031|DCAF1 3.771815220514933 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3871 18.915 259.0 340140.0 25 0 73065.0 + 23395 LTDVREQNKY 10 100 422.5543610491664 1264.6412537476992 3 422.5539428591728 MULTI CID FTMS 0 0 0 3868 130077.578125 0.3999297946115274 -2 0.0337772369384765 3 Unmodified _LTDVREQNKY_ ENSG00000176208|ENST00000321990|ATAD5 29.84058131909904 0.2982332456971691 2 {I|L}T[HA]TC 6 8 47.279 0.0 0.0 3.7385 0.0 0.0 0.0 635.291224232352 635.291224232352 32.67471210339367 0.0 0.0 0.0 0 0.6643943297944485 1.5228787452803376 0.0 0.0 {I|L}T[HA]TC 3.7385 - 195 + 1 2.102 79860.4 1.0 842 3027 3868 DOHH2_400M_050219_2,3871 DOHH2_400M_050219_2,3871,LTDVREQNKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3872 18.925 594.0 259290.0 25 0 49652.0 35196 SSDKDGDSVHT 11 116 574.2478694567986 1146.4811859803972 2 574.2476684451103 MULTI CID FTMS 0 0 0 3868 187936.84375 0.6214899234368038 -2 0.0337772369384765 4 Unmodified _SSDKDGDSVHT_ ENSG00000103528|ENST00000355377|SYT17 18.3397198061782 0.6536596255577894 2 SSDKSSPQSD 10 7 78.964 0.0 0.0 6.8875 0.0 0.0 0.0 125.07235132388908 125.07235132388908 61.97442225174585 0.0 0.0 0.0 0 0.6694451763165201 1.6989700043360187 0.5 0.3807196863200844 SSDKSSPQSD 6.8875 - 1084 + 1 2.102 117075.6 1.0 843 3027 3868 DOHH2_400M_050219_2,3872 DOHH2_400M_050219_2,3872,SSDKDGDSVHT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3874 18.931 148.0 425150.0 25 0 73249.0 + 17594 KPTAAFHLL 9 57 499.2940560666904 996.5735592001809 2 499.2928039431572 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 2 KPT 3 -1 43.94 0.0 0.0 4.4091 0.0 0.0 0.0 667.3529616262683 667.3529616262683 32.346368802282015 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 KPT 4.4091 + + 29 + 1 2.102 52506.5 1.0 844 3028 3873 DOHH2_400M_050219_2,3874 DOHH2_400M_050219_2,3874,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3875 18.94 538.0 157870.0 25 0 72424.0 -1 0 90 508.2943887166263 507.2871122500263 1 508.2966491580009 MULTI CID FTMS 0 0 0 3873 105033.6796875 0.4496532158223968 -18 0.4552116394042969 2 2 P 1 -1 9.1487 0.0 0.0 1.8035 0.0 0.0 392.2233743123294 0.0 392.2233743123294 0.0 2.7971726424232912 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.8035 - 44 + 1 2.102 71021.5 1.0 845 3028 3873 DOHH2_400M_050219_2,3875 DOHH2_400M_050219_2,3875, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3876 18.954 800.0 93186.0 25 0 27779.0 + 25406 NEAESLEEPQG 11 96 601.7627129519028 1201.5108729706055 2 601.7634155154228 MULTI CID FTMS 0 0 0 3873 86194.234375 1.0 0 0.0 3 Unmodified _NEAESLEEPQG_ REV__ENSG00000182670|ENST00000418766|TTC3;REV__ENST00000399586.2_1_X:74960734-74966719:-|nuORF;REV__nc|ENSG00000182670|P53804-2|TTC3;REV__nc|ENSG00000182670|P53804-3|TTC3 16.149105407346934 0.6992268271266642 2 [AG]DAY[HT]QQDP 11 -1 + 55.117 0.0 0.0 4.5873 4.5873 74.205 0.0 0.0 0.0 8.187282284405377 12.565030930265683 8.187282284405377 3.0102999566398125 0 0.0 1.5228787452803376 0.6307196863200843 0.4247425010840047 [AG]DAY[HT]QQDP;[AG]DAY[HT]QENP;[AG]TH{M(Oxidation (M))|F}MAQQDP;{[QD]|[EN]|[WG]|[KD]|[RS]}AY[HT]QQDP;{[DA]|[EG]}GAY[HT]QQDP;[AG]DAY[HT][AG]QDP;[AG]DAY[HT]Q[AG]DP;{[QD]|[EN]|[WG]|[KD]|[RS]}AY[HT]QENP;{[DA]|[EG]}GAY[HT]QENP;[AG]DAY[HT][AG]ENP 4.5873;4.3368;3.9971;3.9059;3.8714;3.8276;3.8276;3.6554;3.6209;3.577 -;-;-;-;-;-;-;-;-;- 447 1 2.102 58103.1 0.5 846 3028 3873 DOHH2_400M_050219_2,3876 DOHH2_400M_050219_2,3876,NEAESLEEPQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3877 18.965 623.0 154940.0 25 0 40643.0 -1 0 103 530.2765487733641 529.269272306764 1 530.2793456912041 MULTI CID FTMS 0 0 0 3873 126483.8125 0.989668765743689 1 -0.0396461486816406 4 2 HY 2 -1 14.949 0.0 0.0 2.8244 0.0 0.0 211.13567963273903 0.0 211.13567963273903 0.0 4.463950151760656 0.0 0.0 0 0.0 0.0 0.0 0.0 HY 2.8244 - 47 + 1 2.102 77265.3 1.0 847 3028 3873 DOHH2_400M_050219_2,3877 DOHH2_400M_050219_2,3877, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3880 18.975 154.0 291020.0 25 0 22812.0 + 42404 VTEDGNQHVY 10 83 581.2622787175308 1160.5100045018614 2 581.2621948122978 MULTI CID FTMS 0 0 0 3879 408417.03125 0.2555558314819109 5 -0.086679458618164 1 Unmodified _VTEDGNQHVY_ ENSG00000121350|ENST00000240651|PYROXD1;nc|ENSG00000121350|Q8WU10-2|PYROXD1 34.93206674587334 0.2110832994570416 2 VTEDG 5 5 62.563 0.0 0.0 5.391 0.0 0.0 0.0 656.2787569635374 656.2787569635374 37.245462655597095 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + VTEDG 5.391 + + 358 + 1 2.102 40913.5 1.0 848 3030 3879 DOHH2_400M_050219_2,3880 DOHH2_400M_050219_2,3880,VTEDGNQHVY False True VTEDGNQHVY 18.974614 581.262194812298 14645236.0 3879.0 nc|ENSG00000121350|Q8WU10-2|PYROXD1;;ENSG00000121350|ENST00000240651|PYROXD1 8.411150296529135 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3881 18.979 252.0 165580.0 25 0 27004.0 28233 PQQPAAYAL 9 70 479.7512335921705 957.487914251141 2 479.7508422732353 MULTI CID FTMS 0 0 0 3879 161528.625 0.3041566157227929 -8 0.2243461608886718 2 Unmodified _PQQPAAYAL_ ENSG00000157303|ENST00000375472|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;nc|ENSG00000157303|Q96L08-3|SUSD3 23.1484247019978 0.2366544122328345 2 PQD 3 7 52.435 0.0 0.0 5.4763 0.0 0.0 0.0 614.3256929986936 614.3256929986936 40.44531259372398 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.4247425010840047 PQD 5.4763 - 17 + 1 2.102 40141.0 1.0 849 3030 3879 DOHH2_400M_050219_2,3881 DOHH2_400M_050219_2,3881,PQQPAAYAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3882 18.985 305.0 230440.0 25 0 24576.0 28076 PPHPPPPPP 9 86 466.7537567423312 931.4929605514624 2 466.7527648806572 MULTI CID FTMS 0 0 0 3879 125758.8671875 0.3275175731226648 13 -0.2587623596191406 3 Unmodified _PPHPPPPPP_ ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000066855|ENST00000262146|MTFR1;ENSG00000163064|ENST00000295206|EN1;ENSG00000175879|ENST00000313173|HOXD8;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000066855|Q15390-2|MTFR1;nc|ENSG00000175879|P13378-2|HOXD8;REV__nc|ENSG00000182095|O15417-2|TNRC18 36.46614268402704 0.0948557732959553 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK] 8 3 + 30.239 0.0 0.0 3.2463 3.2463 67.399 0.0 0.0 0.0 1.1586501115676384 16.65357589165673 1.1586501115676384 1.1932554326627098 0 0.6861818737241735 0.0 0.2742275032520141 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK];{[HG]|PP}HPPP[YK];{[TV]|[{I|L}S]}VEPP[YK];{[NV]|[RG]}{[QS]|[NT]}PP[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]P[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YK][YK];{[HG]|PP}H[YK][YK];{[TV]|[{I|L}S]}V[WH][YK] 3.2463;3.1182;2.9519;1.6893;1.0862;0.54045;0.41235;0.24605 -;-;-;-;-;-;-;- 100 1 2.102 61506.7 1.0 850 3030 3879 DOHH2_400M_050219_2,3882 DOHH2_400M_050219_2,3882,PPHPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3884 19.001 800.0 94680.0 25 0 9124.2 + 23396 LTDVREQNKY 10 106 633.3271791752995 1264.639805417399 2 633.3276855349541 MULTI CID FTMS 0 0 0 3883 70865.2265625 0.802812372662522 1 -0.0197124481201171 1 Unmodified _LTDVREQNKY_ ENSG00000176208|ENST00000321990|ATAD5 53.40400417844725 0.0601721406801337 2 [{I|L}T]D 3 7 40.616 0.0 0.0 3.2117 0.0 0.0 0.0 932.4586585270272 932.4586585270272 20.5174778224378 0.0 0.0 0.0 0 0.8252574989159953 2.0 0.7302046884880937 0.0 + [{I|L}T]D 3.2117 + + 280 1 2.102 61497.9 0.5099999904632568 851 3031 3883 DOHH2_400M_050219_2,3884 DOHH2_400M_050219_2,3884,LTDVREQNKY True True LTDVREQNKY 19.001243 633.327685534954 1764312.21875 3883.0 ENSG00000176208|ENST00000321990|ATAD5 4.426501989364624 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3885 19.005 170.0 404360.0 25 0 35434.0 + 19297 LEKSLGTGL 9 92 459.2689063567093 916.5232597802186 2 459.2691833376884 MULTI CID FTMS 0 0 0 3883 180600.078125 0.1904447254129777 -8 0.2043075561523437 2 Unmodified _LEKSLGTGL_ ENSG00000116668|ENST00000367500|SWT1 46.020951573049366 0.0490941689151868 2 E{I|L}KSAVTG{I|L} 9 4 + 78.695 0.0 0.0 8.5862 8.5862 86.267 0.0 0.0 0.0 49.99668131245279 15.50234911887138 15.50234911887138 3.524459091530403 0 0.7742275032520141 2.0 0.6861818737241735 0.4247425010840047 E{I|L}KSAVTG{I|L};E{I|L}KEKTG{I|L} 8.5862;8.2017 -;- 93 + 1 2.102 58081.6 1.0 852 3031 3883 DOHH2_400M_050219_2,3885 DOHH2_400M_050219_2,3885,LEKSLGTGL True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3889 19.029 800.0 118930.0 25 0 7874.5 + 44920 MPPAPPPPPPQN 12 106 628.3107259277723 1254.6068989223445 2 628.3126708865166 MULTI CID FTMS 0 0 0 3888 88153.953125 0.7512812195308378 -8 0.1481399536132812 1 Unmodified _YPPPPVFTNHS_ ENST00000413725.5_1_11:64533292-64535069:-|nuORF;ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-7|SF1 11.494710602746466 0.7960433852372589 2 {[HG]|PP}{M(Oxidation (M))|F}APPPPP[QP]N 12 9 {[HG]|PP}{M(Oxidation (M))|F}A + + 52.331 5.1503 1.2495 4.1711 4.1711 52.206 0.0 0.0 0.0 0.0 30.11230030668848 0.0 0.0 0 2.305462187404089 0.0 0.0 1.1307196863200843 {[HG]|PP}{M(Oxidation (M))|F}APPPPP[QP]N 4.1711 - 1476 + 1 2.102 71678.8 0.5199999809265137 853 3034 3888 DOHH2_400M_050219_2,3889 DOHH2_400M_050219_2,3889,YPPPPVFTNHS False False MPPAPPPPPPQN 19.028853 628.312670886517 8095734.5 3888.0 ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;ENSG00000168066|ENST00000377390|SF1;;nc|ENSG00000168066|Q15637-7|SF1 7.65512752532959 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3890 19.042 750.0 91587.0 25 0 3911.9 + 26146 NPTIKPHSV 9 122 496.7801790804266 991.5458052276532 2 496.7797729372978 MULTI CID FTMS 0 0 0 3888 85653.140625 0.3652015326762975 9 -0.2152881622314453 2 Unmodified _NPTIKPHSV_ ENSG00000102606|ENST00000646102|ARHGEF7;nc|ENSG00000102606|Q14155-1|ARHGEF7;nc|ENSG00000102606|Q14155-2|ARHGEF7;nc|ENSG00000102606|Q14155-3|ARHGEF7;nc|ENSG00000102606|Q14155-5|ARHGEF7;nc|ENSG00000102606|Q14155-6|ARHGEF7;nc|ENSG00000102606|Q14155|ARHGEF7 47.74868867922204 0.0453060283459952 2 NPT{I|L}KPHSV 9 0 + 58.225 0.0 0.0 5.8722 5.8722 84.599 0.0 0.0 0.0 13.979400086720377 7.841478043435814 7.841478043435814 7.841478043435814 0 0.3182503180159344 1.154901959985743 1.34733495922753 0.0 + + NPT{I|L}KPHSV;NPT{I|L}KP[VS]H;[NP]{[QV]|[N{I|L}]|[RA]|[KV]}K[RH]N;[NP]{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[MG]|[TS]}[H{I|L}]K{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};AA[QA]PK{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[TV]|[{I|L}S]}[HT]K{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[VA]|[{I|L}G]}[NG]PK{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 5.8722;5.0813;2.8046;2.8046;1.461;1.0613;0.89372;0.67562 +;-;-;-;-;-;-;- + 217 + 1 2.102 58528.4 1.0 854 3034 3888 DOHH2_400M_050219_2,3890 DOHH2_400M_050219_2,3890,NPTIKPHSV True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3891 19.056 800.0 136510.0 25 0 30254.0 -1 LFWKRHFCRYK 11 91 547.6248576922809 1639.8527436770426 3 547.9592773318291 MULTI CID FTMS 0 0 0 3888 77435.3515625 0.6196279603497119 -3 0.0276107788085937 3 Carbamidomethyl (C) _LFWKRHFC(Carbamidomethyl (C))RYK_ ENST00000489708.1_1_7:33545204-33545258:+|nuORF 10.898955630103616 0.8084357473702567 2 KAD 3 -1 34.693 0.0 0.0 2.1156 0.0 0.0 0.0 1322.669614569542 1322.669614569542 7.129843661361406 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 KAD 2.1156 - 136 + 1 2.102 85276.5 0.5 855 3034 3888 DOHH2_400M_050219_2,3891 DOHH2_400M_050219_2,3891,LFWKRHFCRYK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3894 19.064 105.0 564260.0 25 0 121540.0 + 28349 PSDPKQYRY 9 67 385.1930254731193 1152.557247019558 3 385.1933471560478 MULTI CID FTMS 0 0 0 3893 333313.90625 0.6296664694515053 -3 0.0511016845703125 1 Unmodified _PSDPKQYRY_ ENSG00000078618|ENST00000352171|NRDC;ENST00000491410.1_1_1:52305873-52344287:-|nuORF;nc|ENSG00000078618|O43847-2|NRDC 32.30548876998284 0.1201446275138228 2 [VG]A{[WS]|[C(Carbamidomethyl (C)){I|L}]}QKP 8 8 39.887 0.0 0.0 3.4608 0.0 0.0 0.0 296.0901685244225 296.0901685244225 28.315717129004355 0.0 0.0 0.0 0 0.5 2.0 0.3807196863200844 0.4247425010840047 [VG]A{[WS]|[C(Carbamidomethyl (C)){I|L}]}QKP 3.4608 - 102 1 2.11 55653.4 1.0 856 3036 3893 DOHH2_400M_050219_2,3894 DOHH2_400M_050219_2,3894,PSDPKQYRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3895 19.068 176.0 492200.0 25 0 34892.0 + 33036 SEPIHVRKY 9 97 376.8765553418466 1127.6078366257398 3 376.8764221072197 MULTI CID FTMS 0 0 0 3893 272322.21875 0.874002853396118 -2 0.0472259521484375 2 Unmodified _SEPIHVRKY_ chr1:241849027-241849109|30|10.2|0.38|4.75|+|ENST00000450748|EXO1,EXO1;ENSG00000174371|ENST00000366548|EXO1;ENST00000493702.5_1_1:242013727-242017913:+|nuORF;nc|ENSG00000174371|Q9UQ84-4|EXO1 13.614867670302877 0.4681447649821485 2 [HV][KT]VH{I|L}[HA]S 10 9 + 29.454 0.0 0.0 2.6121 2.6121 73.019 0.0 0.0 0.0 1.0374943753836163 13.498256904067318 1.0374943753836163 6.777807052660805 0 0.0 0.8239087409443188 0.0 0.0 [HV][KT]VH{I|L}[HA]S;[H{I|L}][KS]VH{I|L}[HA]S;[HV][KT]V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[RE]|[WV]} 2.6121;2.011;0.36991 -;-;- 118 1 2.11 75775.8 1.0 857 3036 3893 DOHH2_400M_050219_2,3895 DOHH2_400M_050219_2,3895,SEPIHVRKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3896 19.08 692.0 184340.0 25 0 13989.0 + 5157 DIKKGHVL 8 122 455.27922884706027 0 455.2791015505791 PEAK CID FTMS 0 0 0 3893 105414.9453125 0.7088387613092536 -3 0.0511016845703125 3 Unmodified _DIKKGHVL_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-8|SYNE2;nc|ENSG00000054654|Q8WXH0-9|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 32.30548876998284 0.2094692153732555 2 D{I|L}{I|L}[HS]V 6 4 18.993 0.0 0.0 2.0905 0.0 0.0 113.08322785702168 128.07187830142814 241.15510615844985 0.0 0.0 0.0 0.0 0 1.0387254899964358 0.0 1.274227503252014 0.0 D{I|L}{I|L}[HS]V 2.0905 - 137 + 1 2.11 104098.9 1.0 858 3036 3893 DOHH2_400M_050219_2,3896 DOHH2_400M_050219_2,3896,DIKKGHVL False True DIKKGHVL 19.07993 455.279101550579 649227.4375 3893.0 nc|ENSG00000054654|Q8WXH0|SYNE2;;nc|ENSG00000054654|Q8WXH0-9|SYNE2;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0-8|SYNE2 4.3104933102925616 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3898 19.087 265.0 256950.0 25 0 72232.0 + 45493 YTNNYAVSI 9 86 522.7522215223236 1043.489890111447 2 523.2519409060478 MULTI CID FTMS 0 0 0 3897 121511.15625 0.293135204793587 -7 0.1109256744384765 1 Unmodified _YTNNYAVSI_ REV__ENST00000609796.1_1_20:1460117-1472086:-|nuORF 21.74664581756881 0.2544899275067181 2 [YT]S 3 -1 31.254 0.0 0.0 2.9952 0.0 0.0 0.0 689.3248631898068 689.3248631898068 16.359921914233905 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [YT]S 2.9952 - 99 + 1 2.11 58259.7 1.0 859 3037 3897 DOHH2_400M_050219_2,3898 DOHH2_400M_050219_2,3898,YTNNYAVSI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3899 19.095 443.0 198990.0 25 0 19059.0 5328 DLFPKDSII 9 113 524.2875267618764 1046.5605005905527 2 524.2876464724541 MULTI CID FTMS 0 0 0 3897 137136.390625 0.1550595495109811 -4 0.0713272094726562 2 Unmodified _DLFPKDSII_ ENSG00000174173|ENST00000309922|TRMT10C 24.020572477871973 0.2255576514309169 2 D{I|L}K{[QG]|[NA]}{[WT]|[RM]}S{I|L} 9 6 + 57.157 0.0 0.0 5.4614 5.4614 77.697 0.0 0.0 0.0 23.969771685254383 8.657424843733637 8.657424843733637 3.0102999566398125 0 0.3807196863200844 2.0 0.9247425010840048 0.0 D{I|L}K{[QG]|[NA]}{[WT]|[RM]}S{I|L};{I|L}DK{[QG]|[NA]}{[WT]|[RM]}S{I|L};D{I|L}RR[C(Carbamidomethyl (C))K]S{I|L};D{I|L}K[{I|L}A]D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L};D{I|L}RRG[KC]S{I|L};{I|L}DRR[C(Carbamidomethyl (C))K]S{I|L};{I|L}DK[{I|L}A]D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L};{I|L}DRRG[KC]S{I|L};D{I|L}RRD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L};D{I|L}K[{I|L}A]D[{I|L}P]Y 5.4614;5.1738;5.0544;4.908;4.8659;4.7668;4.6204;4.5783;4.5767;4.4084 -;-;-;-;-;-;-;-;-;- 295 + 1 2.11 70542.2 1.0 860 3037 3897 DOHH2_400M_050219_2,3899 DOHH2_400M_050219_2,3899,DLFPKDSII False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3900 19.102 394.0 289640.0 25 0 27154.0 + 33703 SKKGGKAG 8 150 366.7216840904228 731.4288152476456 2 366.7215148806572 MULTI CID FTMS 0 0 0 3897 115967.1015625 0.678531956685605 -2 0.0242462158203125 3 Unmodified _SKKGGKAG_ REV__ENSG00000112761|ENST00000368666|CCN6;REV__nc|ENSG00000112761|O95389-2|CCN6 0.0 0.8243325171867699 2 VQ 2 -1 19.038 0.0 0.0 2.6029 0.0 0.0 0.0 501.2934969537719 501.2934969537719 7.255559245704202 0.0 0.0 0.0 0 0.1079495689832512 0.0 0.0 0.0 VQ 2.6029 - 54 + 1 2.11 94011.5 1.0 861 3037 3897 DOHH2_400M_050219_2,3900 DOHH2_400M_050219_2,3900,SKKGGKAG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3902 19.107 70.0 829680.0 25 0 82375.0 + 8557 ETKLRKEEL 9 88 382.5555038378612 1144.6446821137836 3 382.5555297732353 MULTI CID FTMS 0 0 0 3901 454938.84375 0.9432936284649642 3 -0.0977783203125 1 Unmodified _ETKLRKEEL_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358|DNMT1 17.11289562659939 0.3734572693229295 2 {I|L} 1 8 18.099 0.0 0.0 1.5812 0.0 0.0 1013.5498467639774 0.0 1013.5498467639774 0.0 5.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L} 1.5812 + + 41 + 1 2.11 48623.4 1.0 862 3038 3901 DOHH2_400M_050219_2,3902 DOHH2_400M_050219_2,3902,ETKLRKEEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3903 19.113 311.0 175560.0 25 0 38423.0 21837 LPNVHGRS 8 85 440.2426614639711 878.4707699947422 2 440.2430908083916 MULTI CID FTMS 0 0 0 3901 100327.515625 0.8472231962438004 -2 0.0426788330078125 2 Unmodified _LPNVHGRS_ ENSG00000106305|ENST00000223029|AIMP2;nc|ENSG00000106305|Q13155-2|AIMP2 4.3292370932331545 0.7980541185046766 2 {I|L} 1 7 11.783 0.0 0.0 1.3413 0.0 0.0 747.3761940443501 0.0 747.3761940443501 0.0 0.8136364874884983 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3413 + + 26 + 1 2.11 49647.4 1.0 863 3038 3901 DOHH2_400M_050219_2,3903 DOHH2_400M_050219_2,3903,LPNVHGRS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3904 19.122 493.0 157040.0 25 0 26242.0 + 39719 VEKAPQETY 9 104 532.7663968975961 1063.518240861992 2 532.7673217654228 MULTI CID FTMS 0 0 0 3901 111270.96875 1.0 0 0.0 3 Unmodified _VEKAPQETY_ ENSG00000100764|ENST00000261303|PSMC1;ENST00000396338.3_1_12:18845807-18846413:+|nuORF;nc|ENSG00000100764|P62191-2|PSMC1 51.41523569358685 0.0372669606867193 2 VEKA 4 5 57.907 0.0 0.0 5.4449 0.0 0.0 0.0 633.2495542229917 633.2495542229917 30.354034848505048 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.3494850021680094 + VEKA 5.4449 + + 300 + 1 2.11 70756.0 1.0 864 3038 3901 DOHH2_400M_050219_2,3904 DOHH2_400M_050219_2,3904,VEKAPQETY True True VEKAPQETY 19.121575 532.767321765423 525346.3125 3901.0 ENSG00000100764|ENST00000261303|PSMC1;;ENST00000396338.3_1_12:18845807-18846413:+|nuORF;;nc|ENSG00000100764|P62191-2|PSMC1 7.383374532063802 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3905 19.135 800.0 175980.0 25 0 12791.0 + 28350 PSDPKQYRY 9 104 577.2850527642157 1152.5555525952311 2 577.2845947146416 MULTI CID FTMS 0 0 0 3901 102947.2890625 0.6614260064881448 -1 0.0224533081054687 4 Unmodified _PSDPKQYRY_ ENSG00000078618|ENST00000352171|NRDC;ENST00000491410.1_1_1:52305873-52344287:-|nuORF;nc|ENSG00000078618|O43847-2|NRDC 45.69961567697781 0.0497987121815769 2 PSDPKQY[YR] 9 0 + 73.81 0.0 0.0 6.404 6.404 85.919 0.0 0.0 0.0 62.70094414149064 2.632192780232785 2.632192780232785 7.337321105952313 0 1.0 1.3979400086720375 0.0 0.4247425010840047 + + PSDPKQY[YR];PSDPKQ[RN]DP;PSDPK[AG]Y[YR];PSDPK[AG][RN]DP;PSDY{I|L}[QA][MT]K;PSDYNVV[MT]K 6.404;5.7674;5.6051;4.9723;4.48;4.0424 +;-;-;-;-;- + 144 + 1 2.11 111664.5 0.5299999713897705 865 3038 3901 DOHH2_400M_050219_2,3905 DOHH2_400M_050219_2,3905,PSDPKQYRY True True PSDPKQYRY 19.135407 577.284594714642 3166634.875 3901.0 nc|ENSG00000078618|O43847-2|NRDC;;ENST00000491410.1_1_1:52305873-52344287:-|nuORF;;ENSG00000078618|ENST00000352171|NRDC 6.592726866404216 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3906 19.149 800.0 170810.0 25 0 53420.0 -1 0 108 516.2620374600389 515.2547609934388 1 516.2615844607353 MULTI CID FTMS 0 0 0 3901 113446.890625 0.6488437952968974 -8 0.1333789825439453 5 2 Y 1 -1 15.485 0.0 0.0 3.0052 0.0 0.0 334.1806165616013 0.0 334.1806165616013 0.0 1.5490375143570176 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.0052 - 49 + 1 2.11 109773.5 0.5400000214576721 866 3038 3901 DOHH2_400M_050219_2,3906 DOHH2_400M_050219_2,3906, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3908 19.156 120.0 372780.0 25 0 65292.0 + 42511 VTLDSPVLY 9 51 503.774433802364 1005.534314671528 2 503.7743713259697 MULTI CID FTMS 0 0 0 3907 219599.171875 0.0266618893473998 18 -0.3800106048583984 1 Unmodified _VTLDSPVLY_ REV__ENSG00000139112|ENST00000266458|GABARAPL1;REV__ENSG00000170296|ENST00000302386|GABARAP;REV__nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 26.88365393820708 0.1891292719743517 2 VT{I|L}DT 5 -1 61.682 0.0 0.0 6.1343 0.0 0.0 0.0 473.2366121881469 473.2366121881469 52.47759598533112 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 VT{I|L}DT 6.1343 - 66 + 1 2.117 42764.8 1.0 867 3039 3907 DOHH2_400M_050219_2,3908 DOHH2_400M_050219_2,3908,VTLDSPVLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3909 19.169 800.0 126610.0 25 0 10255.0 + 33037 SEPIHVRKY 9 114 564.8129299996218 1127.6113070660435 2 564.8121826052666 MULTI CID FTMS 0 0 0 3907 91134.21875 0.8607142364365077 1 -0.0381050109863281 2 Unmodified _SEPIHVRKY_ chr1:241849027-241849109|30|10.2|0.38|4.75|+|ENST00000450748|EXO1,EXO1;ENSG00000174371|ENST00000366548|EXO1;ENST00000493702.5_1_1:242013727-242017913:+|nuORF;nc|ENSG00000174371|Q9UQ84-4|EXO1 33.4449034751529 0.1114409586740657 2 {[ES]|[DT]|[{I|L}C]}P{I|L}[HV]RKY 9 0 + 42.145 0.0 0.0 3.7376 3.7376 80.099 0.0 0.0 0.0 28.701746761134714 13.46787486224656 13.46787486224656 9.82779677648046 0 1.2302046884880935 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}P{I|L}[HV]RKY;{[ES]|[DT]|[{I|L}C]}P{I|L}R[HV]KY;{[ES]|[DT]|[{I|L}C]}PAAKH{I|L}{I|L}Y;{[ES]|[DT]|[{I|L}C]}P{I|L}[VG][HV]KY 3.7376;2.866;2.2304;2.0494 +;-;-;- + 166 + 1 2.117 82870.3 0.5299999713897705 868 3039 3907 DOHH2_400M_050219_2,3909 DOHH2_400M_050219_2,3909,SEPIHVRKY True True SEPIHVRKY 19.169437 564.812182605267 502486.875 3907.0 nc|ENSG00000174371|Q9UQ84-4|EXO1;;ENST00000493702.5_1_1:242013727-242017913:+|nuORF;;ENSG00000174371|ENST00000366548|EXO1;;chr1:241849027-241849109|30|10.2|0.38|4.75|+|ENST00000450748|EXO1,EXO1 6.679690043131511 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3910 19.172 151.0 405440.0 25 0 55612.0 + 2714 ATEYKNEEY 9 94 573.7513750723745 0 573.7514526247978 PEAK CID FTMS 0 0 0 3907 260261.109375 0.9350421037279844 -2 0.0693244934082031 3 Unmodified _ATEYKNEEY_ ENSG00000083896|ENST00000344157|YTHDC1;nc|ENSG00000083896|Q96MU7-2|YTHDC1 29.081581746732265 0.1187435359889091 2 EY{M(Oxidation (M))|F} 3 7 17.373 0.0 0.0 1.5166 0.0 0.0 172.08562260393006 531.2206514947874 703.3062740987175 0.0 0.0 0.0 0.0 0 0.6382104921644451 0.0 0.0 0.0 EY{M(Oxidation (M))|F} 1.5166 - 64 + 1 2.117 49517.9 1.0 869 3039 3907 DOHH2_400M_050219_2,3910 DOHH2_400M_050219_2,3910,ATEYKNEEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3911 19.182 571.0 280110.0 25 0 26368.0 17695 KPTGVRTNVP 10 102 534.8116311650452 1067.6087093968904 2 534.8120605349541 MULTI CID FTMS 0 0 0 3907 166589.4375 0.1829469407191953 -8 0.1643867492675781 4 Unmodified _KPTGVRTNVP_ ENSG00000165458|ENST00000298229|INPPL1;nc|ENSG00000165458|O15357-2|INPPL1 28.49450938151212 0.328477364964909 2 KPTGAAR 7 6 72.779 0.0 0.0 6.817 0.0 0.0 0.0 383.1938875787719 383.1938875787719 60.56047929209612 0.0 0.0 0.0 0 1.6989700043360187 0.0 0.8494850021680094 0.3807196863200844 KPTGAAR 6.817 - 181 + 1 2.117 128012.2 1.0 870 3039 3907 DOHH2_400M_050219_2,3911 DOHH2_400M_050219_2,3911,KPTGVRTNVP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3912 19.187 264.0 201770.0 25 0 18044.0 -1 PMARICSTW 9 61 561.2667733041434 1120.518993675087 2 561.2671386599541 MULTI CID FTMS 0 0 0 3907 149403.078125 0.6528430374846507 -1 0.0468711853027343 5 Carbamidomethyl (C) _PMARIC(Carbamidomethyl (C))STW_ ENST00000296440.10_1_3:48465848-48465944:-|nuORF 10.823927491677226 0.5436922275383211 2 MPA 3 -1 51.995 0.0 0.0 4.6402 0.0 0.0 0.0 818.3647682505559 818.3647682505559 34.759402531177415 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 MPA 4.6402 - 28 + 1 2.117 48363.2 1.0 871 3039 3907 DOHH2_400M_050219_2,3912 DOHH2_400M_050219_2,3912,PMARICSTW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3914 19.193 147.0 359060.0 25 0 55773.0 + 17595 KPTAAFHLL 9 59 499.2940560666904 996.5735592001809 2 499.2933837771416 MULTI CID FTMS 0 0 0 3913 185355.46875 0.3299691881335205 5 -0.0744438171386718 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 2 KPT 3 -1 38.812 0.0 0.0 3.8946 0.0 0.0 0.0 667.3542886046026 667.3542886046026 27.64136888583522 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.0 KPT 3.8946 + + 21 + 1 2.117 46430.3 1.0 872 3040 3913 DOHH2_400M_050219_2,3914 DOHH2_400M_050219_2,3914,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3915 19.198 269.0 165080.0 25 0 15200.0 + 45499 YTQQATQSY 9 77 545.245888331963 1088.477223730726 2 545.2457763552666 MULTI CID FTMS 0 0 0 3913 104711.46875 0.7428414786654881 -3 0.1074295043945312 2 Unmodified _YTQQATQSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 10.823927491677226 0.5436922275383211 2 SY 2 7 23.271 0.0 0.0 2.138 0.0 0.0 820.371537212008 0.0 820.371537212008 0.0 6.545061313012781 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 + SY 2.138 + + 140 + 1 2.117 39651.1 1.0 873 3040 3913 DOHH2_400M_050219_2,3915 DOHH2_400M_050219_2,3915,YTQQATQSY False True YTQQATQSY 19.197819 545.245776355267 600630.4375 3913.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 3.776733636856079 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3916 19.2 111.0 464760.0 25 0 40354.0 18014 KSDVNKEYY 9 87 573.277072775997 1144.539592618794 2 573.2774536013603 MULTI CID FTMS 0 0 0 3913 301490.90625 0.7684782047654732 -2 0.0849761962890625 3 Unmodified _KSDVNKEYY_ ENSG00000086589|ENST00000199814|RBM22;ENST00000521248.5_1_5:150076301-150080613:-|nuORF;ENST00000521594.1_1_5:150076301-150080167:-|nuORF;ENST00000522469.5_1_5:150075051-150080604:-|nuORF;nc|ENSG00000086589|Q9NW64-2|RBM22 29.84058131909904 0.1515068451768857 2 [TA]{[SA]|[TG]}V{[QD]|[EN]|[WG]|[KD]|[RS]}KYY 10 5 + 37.048 0.0 0.0 3.2369 3.2369 68.055 0.0 0.0 0.0 1.7609125905568137 10.594399836060768 1.7609125905568137 1.7609125905568137 0 0.9247425010840048 1.2218487496163564 0.75 0.0 [TA]{[SA]|[TG]}V{[QD]|[EN]|[WG]|[KD]|[RS]}KYY;[KS]DV{[QD]|[EN]|[WG]|[KD]|[RS]}KYY;[TA]{[SA]|[TG]}V{[QD]|[EN]|[WG]|[KD]|[RS]}YKY;[TA]{[SA]|[TG]}V{[QN]|[E{I|L}]|[KN]}EYY;[KS]DV{[QD]|[EN]|[WG]|[KD]|[RS]}YKY;[KS]DV{[QN]|[E{I|L}]|[KN]}EYY;[PG]WWH[TA]KY;{[QD]|[EN]|[WG]|[KD]|[RS]}E[YK][TA]KY 3.2369;3.0831;2.8893;2.8201;2.7354;2.6662;1.6763;1.2556 -;-;-;-;-;+;-;- + 186 1 2.117 43540.3 1.0 874 3040 3913 DOHH2_400M_050219_2,3916 DOHH2_400M_050219_2,3916,KSDVNKEYY False True ATEYKNEEY 19.200162 573.27745360136 1337689.25 3913.0 ENSG00000083896|ENST00000344157|YTHDC1;;nc|ENSG00000083896|Q96MU7-2|YTHDC1 2.7730493545532227 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3919 19.214 414.0 164860.0 25 0 16716.0 + 6042 DSDYHQEAY 9 89 564.2173194702718 1126.4200860073436 2 564.2164794802666 MULTI CID FTMS 0 0 0 3918 126079.4296875 0.3205504647437069 -6 0.1442928314208984 1 Unmodified _DSDYHQEAY_ ENSG00000108788|ENST00000435881|MLX;ENST00000585403.5_1_17:40719142-40721608:+|nuORF;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;ENST00000590050.5_1_17:40719112-40721521:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 43.85829265575387 0.0542763391141878 2 QEAY 4 5 40.65 0.0 0.0 3.6087 0.0 0.0 617.206834861525 0.0 617.206834861525 0.0 32.06608156627958 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.4247425010840047 + QEAY 3.6087 + + 52 1 2.117 57927.6 1.0 875 3042 3918 DOHH2_400M_050219_2,3919 DOHH2_400M_050219_2,3919,DSDYHQEAY True True DSDYHQEAY 19.213937 564.216479480267 1936330.0 3918.0 ENST00000585403.5_1_17:40719142-40721608:+|nuORF;;ENST00000590050.5_1_17:40719112-40721521:+|nuORF;;nc|ENSG00000108788|Q9UH92|MLX;;nc|ENSG00000108788|Q9UH92-2|MLX;;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;;ENSG00000108788|ENST00000435881|MLX 4.408182621002197 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3920 19.228 800.0 132700.0 25 0 39460.0 + 11298 GEVERAQSEY 10 112 584.26749367392 1166.5204344146398 2 584.2678710818291 MULTI CID FTMS 0 0 0 3918 125621.3125 1.0 0 0.0 2 Unmodified _GEVERAQSEY_ ENSG00000173898|ENST00000533211|SPTBN2;nc|ENSG00000173898|O15020-2|SPTBN2 51.487983226225225 0.0714176344394665 2 {[DA]|[EG]}VERAQSEY 10 0 + 70.952 0.0 0.0 6.0824 6.0824 86.744 0.0 0.0 0.0 16.972805581256196 16.53212513775344 16.53212513775344 9.164539485499256 0 1.6989700043360187 1.3010299956639813 0.3807196863200844 0.7302046884880937 + + {[DA]|[EG]}VERAQSEY;{[DA]|[EG]}VERA[AG]SEY;{NN|[MP]|[D{I|L}]|[EV]}R{[DA]|[EG]}AQSEY;{NN|[MP]|[D{I|L}]|[EV]}GERAQSEY;{[DA]|[EG]}VERA{[SA]|[TG]}GEY;{[MG]|[TS]}PERAQSEY;{NN|[MP]|[D{I|L}]|[EV]}R[QA]{[DA]|[EG]}SEY;{NN|[MP]|[D{I|L}]|[EV]}R{[DA]|[EG]}A[AG]SEY;{NN|[MP]|[D{I|L}]|[EV]}GERA[AG]SEY;{[DA]|[EG]}VER[QT]GEY 6.0824;5.2968;4.6274;4.624;4.3712;4.1366;3.9867;3.8418;3.8384;3.8075 +;-;-;-;-;-;-;-;-;- + 610 1 2.117 83353.2 0.6499999761581421 876 3042 3918 DOHH2_400M_050219_2,3920 DOHH2_400M_050219_2,3920,GEVERAQSEY True True GEVERAQSEY 19.227768 584.267871081829 481650.46875 3918.0 ENSG00000173898|ENST00000533211|SPTBN2;;nc|ENSG00000173898|O15020-2|SPTBN2 7.676379203796387 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3923 19.248 800.0 149770.0 25 0 22786.0 + 24679 MMDPNSTQRY 10 90 629.762714009465 1257.5108750857298 2 629.7631103396416 MULTI CID FTMS 0 0 0 3922 129742.0 0.4237150981182399 -3 0.0314388275146484 1 Oxidation (M) _MM(Oxidation (M))DPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 61.08992128646608 0.0337271188422265 2 M{M(Oxidation (M))|F}DPNSTQ[YR] 10 0 + 86.745 0.0 0.0 6.8982 6.8982 81.163 0.0 0.0 0.0 64.6298436613614 5.764837301042718 5.764837301042718 1.8839576472322648 0 1.25 0.0 0.7614393726401688 0.8494850021680094 + + M{M(Oxidation (M))|F}DPNSTQ[YR];M{M(Oxidation (M))|F}DPNTSQ[YR];M{M(Oxidation (M))|F}DPNST[AG][YR];M{M(Oxidation (M))|F}DPGGSTQ[YR];M{M(Oxidation (M))|F}DPNTS[AG][YR];M{M(Oxidation (M))|F}DPGGTSQ[YR];M{M(Oxidation (M))|F}DPGGST[AG][YR];M{M(Oxidation (M))|F}DPGGTS[AG][YR];M{M(Oxidation (M))|F}DPN[C(Carbamidomethyl (C))R][YR];M{M(Oxidation (M))|F}DPN[QA]P[QP]N 6.8982;6.7484;6.1694;6.1694;6.0196;6.0196;5.4435;5.2937;4.8243;4.2849 +;-;-;-;-;-;-;-;-;- + 449 + 1 2.117 92765.8 0.6200000047683716 877 3044 3922 DOHH2_400M_050219_2,3923 DOHH2_400M_050219_2,3923,MMDPNSTQRY True False MMDPNSTQRY 19.247977 629.763110339642 1401881.875 3922.0 ENSG00000124571|ENST00000265351|XPO5 6.851088047027588 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3924 19.262 800.0 183770.0 25 0 30176.0 + 4793 DENPDKSTL 9 148 509.7377828639908 1017.4610127947816 2 509.7379943728447 MULTI CID FTMS 0 0 0 3922 107548.421875 0.2828308565957648 -7 0.1516704559326172 2 Unmodified _DENPDKSTL_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 43.77239144664712 0.0547478964384323 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NPD[KS]T{I|L} 9 0 + 35.011 0.0 0.0 3.4411 3.4411 69.606 0.0 0.0 0.0 2.43575575842074 2.43575575842074 2.43575575842074 2.43575575842074 0 0.8494850021680094 0.0 0.5451140161145328 0.3494850021680094 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NPD[KS]T{I|L};[DP]KST{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]};[TA]APST{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]};{[QD]|[EN]|[WG]|[KD]|[RS]}PST{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGPD[KS]T{I|L};[VS]GPST{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]};[PG][VS]ST{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]};[PS][VG]ST{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]};{[QD]|[EN]|[WG]|[KD]|[RS]}PSVPD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YY[KS]T{I|L} 3.4411;3.2017;2.8649;2.5969;2.536;2.3214;1.4527;1.2688;1.2421;0.93464 +;-;-;-;-;-;-;-;-;- + 756 + 1 2.117 115627.5 0.5899999737739563 878 3044 3922 DOHH2_400M_050219_2,3924 DOHH2_400M_050219_2,3924,DENPDKSTL True True DENPDKSTL 19.261791 509.737994372845 3947786.75 3922.0 ENSG00000114346|ENST00000392692|ECT2;;nc|ENSG00000114346|Q9H8V3-3|ECT2;;nc|ENSG00000114346|Q9H8V3-4|ECT2;;nc|ENSG00000114346|Q9H8V3-2|ECT2 6.607225100199382 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3926 19.267 156.0 375590.0 25 0 34358.0 + 19298 EIKEKTGL 8 81 459.2689063567093 916.5232597802186 2 459.2691528201103 MULTI CID FTMS 0 0 0 3925 195693.65625 0.2063610659337465 6 -0.1266193389892578 1 Unmodified _LEKSLGTGL_ ENSG00000204304|ENST00000375050|PBX2;nc|ENSG00000167081|P40426-5|PBX3;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;ENSG00000167081|ENST00000373489|PBX3;nc|ENSG00000167081|P40426-2|PBX3 25.399314129420983 0.2080152500878129 2 {[QN]|[E{I|L}]|[KN]}KEKTG{I|L} 8 3 + 46.834 0.0 0.0 5.11 5.11 78.223 0.0 0.0 0.0 34.84427538256881 9.641237821364967 9.641237821364967 4.490925311194189 0 0.25 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}KEKTG{I|L};{[QN]|[E{I|L}]|[KN]}KS{[VA]|[{I|L}G]}TG{I|L} 5.11;4.62 -;+ + 84 + 1 2.117 51081.0 1.0 879 3045 3925 DOHH2_400M_050219_2,3926 DOHH2_400M_050219_2,3926,LEKSLGTGL False False EIKEKTGL 19.267418 459.26915282011 4264748.0 3925.0 ENSG00000204304|ENST00000375050|PBX2;;nc|ENSG00000167081|P40426-5|PBX3;;ENST00000478678.5_1_6:32154995-32157692:-|nuORF;;ENSG00000167081|ENST00000373489|PBX3;;nc|ENSG00000167081|P40426-2|PBX3 3.342528263727824 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3927 19.274 384.0 225010.0 25 0 12338.0 + 679 AEMNRGSNEWK 11 97 441.2031422593566 1320.5875973782695 3 441.2028076052666 MULTI CID FTMS 0 0 0 3925 149743.484375 0.4722544825227686 -3 0.0578060150146484 2 Unmodified _AEMNRGSNEWK_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENST00000568339.5_1_16:85839106-85839475:+|nuORF 38.61474834105838 0.2337350513322792 2 AEM[KT]T 6 8 54.698 0.0 0.0 4.1419 0.0 0.0 0.0 656.2607515924436 656.2607515924436 22.491596866368013 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.8494850021680094 0.0 AEM[KT]T 4.1419 - 581 + 1 2.117 73913.9 1.0 880 3045 3925 DOHH2_400M_050219_2,3927 DOHH2_400M_050219_2,3927,AEMNRGSNEWK False True AEMNRGSNEWK 19.274299 441.202807605267 2252050.3125 3925.0 ENST00000568339.5_1_16:85839106-85839475:+|nuORF;;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;;ENSG00000131143|ENST00000253452|COX4I1;;ENST00000564648.1_1_16:85839106-85840477:+|nuORF 4.204081614812215 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3928 19.284 542.0 154180.0 25 0 15013.0 + + 28197 QEQDLEKTRQY 11 108 479.7512335921705 957.487914251141 2 479.7508117556572 MULTI CID FTMS 0 0 0 3925 89673.6953125 0.1688545772342634 7 -0.1541461944580078 3 Unmodified _PQDRVGSSL_ ENSG00000258472|ENST00000531839|unknown;ENSG00000076382|ENST00000321765|SPAG5 21.53697664764585 0.2571576504437394 2 PQD 3 -1 54.425 0.0 0.0 5.6841 0.0 0.0 0.0 614.3266695611936 614.3266695611936 41.660502837155455 0.0 0.0 0.0 0 1.0 1.3979400086720375 0.0 0.4247425010840047 PQD 5.6841 + + 102 + 1 2.117 69347.8 1.0 881 3045 3925 DOHH2_400M_050219_2,3928 DOHH2_400M_050219_2,3928,PQDRVGSSL False False QEQDLEKTRQY 19.28382 479.750811755657 295301.90625 3925.0 ENSG00000258472|ENST00000531839|unknown;;ENSG00000076382|ENST00000321765|SPAG5 0.5562227567036947 3.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3929 19.298 800.0 116160.0 25 0 19782.0 + 17713 KPTPTMLPLT 10 105 549.8170107019359 0 549.8180419802666 PEAK CID FTMS 0 0 0 3925 82084.6640625 1.0 0 0.0 4 Unmodified _KPTPTMLPLT_ REV__ENST00000524459.5_1_6:26365525-26368786:+|nuORF 13.90604991867851 0.345182617568752 2 PTT 3 -1 29.693 0.0 0.0 2.7052 0.0 0.0 128.09570908113363 667.3523653619749 795.4480744431085 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 PTT 2.7052 - 18 + 1 2.117 78542.6 0.5 882 3045 3925 DOHH2_400M_050219_2,3929 DOHH2_400M_050219_2,3929,KPTPTMLPLT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3932 19.307 150.0 380310.0 25 0 55787.0 + 17596 KPTAAFHLL 9 84 499.2940560666904 996.5735592001809 2 499.8040344119072 MULTI CID FTMS 0 0 0 3931 257835.765625 0.7280323273658011 12 -0.2516460418701172 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 14.838274106304384 0.4350285940865338 2 KPT 3 -1 25.177 0.0 0.0 2.5264 0.0 0.0 0.0 667.3561495416624 667.3561495416624 4.731975075880328 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 KPT 2.5264 + + 62 + 1 2.125 49416.5 1.0 883 3047 3931 DOHH2_400M_050219_2,3932 DOHH2_400M_050219_2,3932,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3933 19.321 800.0 205310.0 25 0 24871.0 + 38145 TPNVKNKL 8 159 457.2769482687762 912.5393436043524 2 457.2769653201103 MULTI CID FTMS 0 0 0 3931 137495.5 0.7428017203175581 1 -0.0331401824951171 2 Unmodified _TPNVKNKL_ ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047-2|SETDB1;nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1 58.6788170122104 0.1149141431586871 2 TPNVKNK{I|L} 8 0 + 75.544 0.0 0.0 8.2784 8.2784 87.708 0.0 0.0 0.0 33.39948061694352 5.232267260864049 5.232267260864049 5.232267260864049 0 1.260001290417896 1.6989700043360187 0.0 0.805462187404089 + + TPNVKNK{I|L};TPNVKN{I|L}K;TPGGVKNK{I|L};TPNVKGGK{I|L};TPGGVKN{I|L}K;TPNVKGG{I|L}K;TPGGVKGGK{I|L};TPGGVKGG{I|L}K;[KG]GK{[NV]|[RG]}PT{I|L};{[NV]|[RG]}PE[K{I|L}]T{I|L} 8.2784;7.705;7.2634;7.2634;6.6901;6.6901;6.2544;5.681;1.7224;0.71222 +;-;-;-;-;-;-;-;-;- + 430 + 1 2.125 129562.5 0.6899999976158142 884 3047 3931 DOHH2_400M_050219_2,3933 DOHH2_400M_050219_2,3933,TPNVKNKL True True TPNVKNKL 19.321076 457.27696532011 651761.0625 3931.0 nc|ENSG00000143379|Q15047-2|SETDB1;;nc|ENSG00000143379|Q15047-3|SETDB1;;ENSG00000143379|ENST00000692827|SETDB1;;nc|ENSG00000143379|Q15047|SETDB1 5.881616910298665 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3934 19.335 800.0 208340.0 25 0 15393.0 + 5374 DLKKAQGI 8 149 436.7637501271871 871.5129473211742 2 436.7636291384697 MULTI CID FTMS 0 0 0 3931 111490.3125 0.9095452229270946 -1 0.0040321350097656 3 Unmodified _DLKKAQGI_ ENSG00000171497|ENST00000307720|PPID 54.773552608820026 0.1167943196628344 2 D{I|L}K[KA]QG{I|L} 8 0 + 61.164 0.0 0.0 7.0181 7.0181 83.322 0.0 0.0 0.0 5.894837117501133 3.203351508593677 3.203351508593677 3.203351508593677 0 1.0114393726401687 1.6989700043360187 0.0 0.6549471895720984 + + D{I|L}K[KA]QG{I|L};D{I|L}K[KA]QVA;{I|L}DK[KA]QG{I|L};{I|L}DK[KA]QVA;D{I|L}K[KA][AG]G{I|L};D{I|L}K[KA][AG]VA;{I|L}DK[KA][AG]G{I|L};{I|L}DK[KA][AG]VA;D{I|L}K[KA][VG]AA;{I|L}DK[KA][VG]AA 7.0181;6.6506;6.3417;5.9742;5.9554;5.5878;5.279;4.9114;4.8964;4.22 +;-;-;-;-;-;-;-;-;- + 632 + 1 2.125 134164.1 0.5199999809265137 885 3047 3931 DOHH2_400M_050219_2,3934 DOHH2_400M_050219_2,3934,DLKKAQGI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3936 19.345 427.0 152960.0 25 0 17540.0 + 680 AEMNRGSNEWK 11 74 661.3012657112779 1320.5879784893557 2 661.3002807497978 MULTI CID FTMS 0 0 0 3935 121315.6484375 0.8290332531513978 -4 0.1032905578613281 1 Unmodified _AEMNRGSNEWK_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENST00000568339.5_1_16:85839106-85839475:+|nuORF 35.61225514009592 0.279986979807413 2 [TA][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EWK 10 6 [TA][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}E + + 35.701 -1.1925 -0.12065 2.7034 2.7034 48.445 0.0 0.0 0.0 0.0 13.261430418655491 0.0 0.0 0 1.0 0.0 0.0 0.7742275032520141 [TA][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EWK 2.7034 - 356 + 1 2.125 56593.7 1.0 886 3048 3935 DOHH2_400M_050219_2,3936 DOHH2_400M_050219_2,3936,AEMNRGSNEWK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3937 19.348 151.0 371250.0 25 0 25347.0 -1 ESATITCLV 9 94 497.2496145739215 992.484676214643 2 497.2497131228447 MULTI CID FTMS 0 0 0 3935 304664.40625 0.2682061103688804 -11 0.2549610137939453 2 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 48.345845343767074 0.0439967357579942 2 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 44.167 0.0 0.0 4.4502 4.4502 86.275 0.0 0.0 0.0 25.22700268623656 11.58737689633402 11.58737689633402 36.95113643542046 0 1.1549471895720984 0.0 0.6549471895720985 0.1344005005252609 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}A{I|L}{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}K 4.4502;0.72707 -;- 124 + 1 2.125 49237.5 1.0 887 3048 3935 DOHH2_400M_050219_2,3937 DOHH2_400M_050219_2,3937,ESATITCLV False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 3938 19.353 285.0 331920.0 25 0 27276.0 + 43656 YARLHPRAV 9 111 361.5455804540293 1081.6149119622878 3 361.5453063845634 MULTI CID FTMS 0 0 0 3935 117298.8125 0.083405816423575 -12 0.275186538696289 3 Unmodified _YARLHPRAV_ ENSG00000221983|ENST00000442744|UBA52 24.020572477871973 0.2255576514309169 2 YVQ{I|L}HV 6 5 49.003 0.0 0.0 4.5305 0.0 0.0 0.0 339.17682713571423 339.17682713571423 39.17017533604145 0.0 0.0 0.0 0 1.174742501084005 0.0 0.0 0.0 YVQ{I|L}HV 4.5305 - 116 + 1 2.125 80008.7 1.0 888 3048 3935 DOHH2_400M_050219_2,3938 DOHH2_400M_050219_2,3938,YARLHPRAV False True YARLHPRAV 19.353287 361.545306384563 17144023.625 3935.0 ENSG00000221983|ENST00000442744|UBA52 3.667359193166097 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3940 19.358 114.0 437400.0 25 0 63924.0 + 45516 YTSPGTQKY 9 67 522.7522215223236 1043.489890111447 2 522.7536498904228 MULTI CID FTMS 0 0 0 3939 318300.28125 0.5540857641928049 6 -0.09588623046875 1 Unmodified _YTSPGTQKY_ ENSG00000064313|ENST00000378164|TAF2 29.081581746732265 0.1611639662936252 2 [YT]SP 4 5 44.253 0.0 0.0 4.2408 0.0 0.0 0.0 592.2719210260374 592.2719210260374 21.614459258636813 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 + [YT]SP 4.2408 + + 64 + 1 2.125 45635.3 1.0 889 3049 3939 DOHH2_400M_050219_2,3940 DOHH2_400M_050219_2,3940,YTSPGTQKY False True YTSPGTQKY 19.358245 522.753649890423 7255818.5 3939.0 ENSG00000064313|ENST00000378164|TAF2 6.846154530843099 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3941 19.363 239.0 289340.0 25 0 30890.0 27529 PKTHLLAF 8 83 463.7747753045708 925.5349976759416 2 463.7746765017509 MULTI CID FTMS 0 0 0 3939 170893.109375 1.0 0 0.0 2 Unmodified _PKTHLLAF_ ENSG00000064205|ENST00000190983|CCN5;ENST00000497421.1_1_20:43344031-43348789:+|nuORF;nc|ENSG00000064205|O76076-2|CCN5 32.116972079565 0.368454113111938 2 KPTH 4 6 41.67 0.0 0.0 4.5023 0.0 0.0 0.0 459.263080692644 459.263080692644 30.25019205421545 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 KPTH 4.5023 - 46 + 1 2.125 60192.9 1.0 890 3049 3939 DOHH2_400M_050219_2,3941 DOHH2_400M_050219_2,3941,PKTHLLAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3942 19.371 430.0 169900.0 25 0 17395.0 + 27516 PKLSRNVP 8 97 455.77808727208753 909.5416216109752 2 455.7764770388603 MULTI CID FTMS 0 0 0 3939 123890.65625 0.934615477553734 3 -0.0626430511474609 3 Unmodified _PKLSRNVP_ REV__nc|ENSG00000215568|Q2WGN9|GAB4 11.640296217721598 0.738950129755968 2 KPTKP[SG]VP 9 -1 + 44.248 0.0 0.0 4.8649 4.8649 87.17 0.0 0.0 0.0 32.82830289582451 1.7077793410802045 1.7077793410802045 24.26091259055681 0 0.8807196863200843 0.0 0.25 0.0 KPTKP[SG]VP;KP{I|L}{[NV]|[RG]}[SG]VP 4.8649;2.1975 -;- 119 + 1 2.125 62180.7 1.0 891 3049 3939 DOHH2_400M_050219_2,3942 DOHH2_400M_050219_2,3942,PKLSRNVP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3943 19.384 800.0 139360.0 25 0 10629.0 + 7215 EEQVARESY 9 117 555.7566791488376 1109.4988053644752 2 555.7565185427666 MULTI CID FTMS 0 0 0 3939 89463.828125 0.4514603369170659 -3 0.0555877685546875 4 Unmodified _EEQVARESY_ ENSG00000068308|ENST00000376488|OTUD5;nc|ENSG00000068308|Q96G74-2|OTUD5;nc|ENSG00000068308|Q96G74-3|OTUD5;nc|ENSG00000068308|Q96G74-4|OTUD5;nc|ENSG00000068308|Q96G74|OTUD5 106.94017166704064 0.0073169432358171 2 EEQVA{[RE]|[WV]}SY 9 0 + 80.752 0.0 0.0 7.2782 7.2782 91.174 0.0 0.0 0.0 30.935690226185613 8.360659001642858 8.360659001642858 9.208187539523747 0 1.416386562212267 1.5228787452803376 1.4698565171985376 0.3807196863200844 + + EEQVA{[RE]|[WV]}SY;EE[AG]VA{[RE]|[WV]}SY;EEQ[KQ][QA]SY;[AG][DP]VNAVQ[HC];[DP]QVNAVQ[HC];[AG][DP]VGGAVQ[HC];[AG][DP]VNAV[AG][HC];[DP]QVGGAVQ[HC];[DP]QVNAV[AG][HC];{[QV]|[N{I|L}]|[RA]|[KV]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVQ[HC] 7.2782;6.4483;5.5079;5.4086;5.3591;4.5858;4.5858;4.5331;4.5331;4.3114 +;-;-;-;-;-;-;-;-;- + 1333 + 1 2.125 90125.8 0.5 892 3049 3939 DOHH2_400M_050219_2,3943 DOHH2_400M_050219_2,3943,EEQVARESY True True EEQVARESY 19.384376 555.756518542767 814805.5625 3939.0 ENSG00000068308|ENST00000376488|OTUD5;;nc|ENSG00000068308|Q96G74-3|OTUD5;;nc|ENSG00000068308|Q96G74|OTUD5;;nc|ENSG00000068308|Q96G74-2|OTUD5;;nc|ENSG00000068308|Q96G74-4|OTUD5 7.229921181996663 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3946 19.394 137.0 477250.0 25 0 36619.0 + 30539 RELPGHTGY 9 86 515.259402282545 1028.50425163189 2 515.2596923708916 MULTI CID FTMS 0 0 0 3945 328640.65625 0.7669876274802747 4 -0.060770034790039 1 Unmodified _RELPGHTGY_ ENSG00000114450|ENST00000232564|GNB4;ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000172354|P62879-2|GNB2 47.594388314883695 0.0456443387682827 2 {[RE]|[WV]}{I|L}[PG]HTGY 9 0 + 66.106 0.0 0.0 6.4274 6.4274 85.081 0.0 0.0 0.0 12.389917747712644 60.62137499549429 12.389917747712644 6.478174818886373 0 1.924742501084005 0.0 0.4247425010840047 0.6747425010840047 + + {[RE]|[WV]}{I|L}[PG]HTGY;{[RE]|[WV]}{I|L}[YQ]TGY;{[RE]|[WV]}{I|L}[PG]HGTY;{[RE]|[WV]}{I|L}[YQ]GTY;{[RE]|[WV]}T[R{M(Oxidation (M))|F}]TGY;{[RE]|[WV]}T[R{M(Oxidation (M))|F}]GTY;[{I|L}T]R[PG]HEGY;[HT]TH[PG][PS][VP];[{I|L}T]R[YQ]WY;[{I|L}T]R[SG][W{M(Oxidation (M))|F}]Y 6.4274;5.7975;5.4773;4.8475;4.5809;3.6308;2.5852;2.3523;1.7738;0.91373 +;-;-;-;-;-;-;-;-;- + 170 1 2.131 54269.2 1.0 893 3051 3945 DOHH2_400M_050219_2,3946 DOHH2_400M_050219_2,3946,RELPGHTGY True True RELPGHTGY 19.393738 515.259692370892 3086804.25 3945.0 ENSG00000172354|ENST00000303210|GNB2;;ENSG00000114450|ENST00000232564|GNB4;;nc|ENSG00000172354|P62879-2|GNB2 7.706657886505127 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3947 19.403 524.0 315750.0 25 0 78227.0 + 32764 SEDPSHPSM 9 114 493.6978290504961 985.3811051677924 2 493.6975585818291 MULTI CID FTMS 0 0 0 3945 172985.59375 0.7436973421017931 -5 0.0907039642333984 2 Unmodified _SEDPSHPSM_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 71.13359017698441 0.0206607516130725 2 {[ES]|[DT]|[{I|L}C]}DPSHPSM 9 0 + 44.241 0.0 0.0 4.4897 4.4897 72.394 0.0 0.0 0.0 0.7378621416091846 1.8842499412940648 0.7378621416091846 1.8842499412940648 0 0.7742275032520141 0.0 0.6989700043360187 0.0 + + {[ES]|[DT]|[{I|L}C]}DPSHPSM;{[ES]|[DT]|[{I|L}C]}DPSH[WE];{[ES]|[DT]|[{I|L}C]}D[YT]GPSM;{[ES]|[DT]|[{I|L}C]}D[YT]G[WE];{[ES]|[DT]|[{I|L}C]}D[W{M(Oxidation (M))|F}][TA]M;{[ES]|[DT]|[{I|L}C]}D[YT]WW;{[ES]|[DT]|[{I|L}C]}D[W{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}];{[ES]|[DT]|[{I|L}C]}[W{M(Oxidation (M))|F}]D[R{M(Oxidation (M))|F}];{[ES]|[DT]|[{I|L}C]}[W{M(Oxidation (M))|F}]D[TA]M;{[ES]|[DT]|[{I|L}C]}D[YT]S{[MG]|[TS]}P 4.4897;4.2985;2.7927;2.6015;2.1982;1.951;1.8255;1.7808;1.7225;1.2613 +;-;-;-;-;-;-;-;-;- + 445 + 1 2.131 132467.5 1.0 894 3051 3945 DOHH2_400M_050219_2,3947 DOHH2_400M_050219_2,3947,SEDPSHPSM True True SEDPSHPSM 19.402957 493.6995 1348471.875 3945.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 8.12997833887736 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3948 19.408 249.0 339020.0 25 0 37249.0 33506 SIKAAIKAA 9 104 436.78181928277456 871.5490856323491 2 436.7818481326103 MULTI CID FTMS 0 0 0 3945 185903.03125 0.7672908154769713 -1 0.0040454864501953 3 Unmodified _SIKAAIKAA_ ENSG00000086712|ENST00000380122|TXLNG;nc|ENSG00000086712|Q9NUQ3-2|TXLNG 20.453626601364224 0.2830276176381075 2 {[TV]|[{I|L}S]}AK 4 5 32.664 0.0 0.0 3.7478 0.0 0.0 0.0 469.2775163987053 469.2775163987053 19.578343878162343 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}AK 3.7478 - 208 + 1 2.131 71183.2 1.0 895 3051 3945 DOHH2_400M_050219_2,3948 DOHH2_400M_050219_2,3948,SIKAAIKAA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3949 19.416 473.0 277980.0 25 0 71409.0 -1 PIYQCVFIYP 10 91 433.8862539067973 1298.636932320592 3 434.2196838259697 MULTI CID FTMS 0 0 0 3945 106815.5078125 0.5571548948053371 -6 0.1266193389892578 4 Carbamidomethyl (C) _PIYQC(Carbamidomethyl (C))VFIYP_ ENST00000319863.12_1_11:767252-767450:-|nuORF;ENST00000465313.6_1_11:767249-771035:-|nuORF;nc|ENSG00000177225|Q8NB37-2|GATD1 1.9063754702782607 0.7178183895776981 2 Y 1 -1 11.259 0.0 0.0 0.86699 0.0 0.0 1117.5627878887544 0.0 1117.5627878887544 0.0 0.4216044285001796 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.86699 + + 45 + 1 2.131 106798.8 1.0 896 3051 3945 DOHH2_400M_050219_2,3949 DOHH2_400M_050219_2,3949,PIYQCVFIYP False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_2 3952 19.426 156.0 418280.0 25 0 39601.0 + 17516 KPIRTKYY 8 75 534.8116311650452 1067.6087093968904 2 534.8115112185478 MULTI CID FTMS 0 0 0 3951 409091.84375 0.4492607839391833 6 -0.1334209442138672 1 Unmodified _KPIRTKYY_ REV__ENSG00000115761|ENST00000381685|NOL10;REV__nc|ENSG00000115761|Q9BSC4-2|NOL10;REV__nc|ENSG00000115761|Q9BSC4-4|NOL10 16.942295170755138 0.6606234159769251 2 KPTG 4 -1 45.433 0.0 0.0 4.2556 0.0 0.0 0.0 681.3689058893186 681.3689058893186 33.44335023848103 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTG 4.2556 - 44 + 1 2.131 55484.7 1.0 897 3053 3951 DOHH2_400M_050219_2,3952 DOHH2_400M_050219_2,3952,KPIRTKYY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3953 19.438 718.0 188890.0 25 0 29850.0 + 29085 QELVRRGNSQY 11 136 450.5687183248631 1348.6843255747892 3 450.5685302615166 MULTI CID FTMS 0 0 0 3951 42122.7265625 0.5300653317186703 1 -0.0253734588623046 2 Unmodified _QELVRRGNSQY_ ENSG00000181222|ENST00000674977|POLR2A;ENST00000576952.1_1_17:7401124-7401562:+|nuORF;nc|ENSG00000181222|P24928-2|POLR2A;nc|ENSG00000181222|P24928|POLR2A 7.846045518447754 0.8381297814158264 2 QY 2 9 25.005 0.0 0.0 1.854 0.0 0.0 1039.550389297539 0.0 1039.550389297539 0.0 4.413053415762455 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.5 + QY 1.854 + + 70 1 2.131 108591.1 1.0 898 3053 3951 DOHH2_400M_050219_2,3953 DOHH2_400M_050219_2,3953,QELVRRGNSQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3954 19.445 408.0 226380.0 25 0 27991.0 + 16015 ITESNMKSRY 10 112 410.2044470760452 1227.5915118283356 3 410.2044555544853 MULTI CID FTMS 0 0 0 3951 131029.1796875 0.7230076818840088 -1 0.0040264129638671 3 Unmodified _ITESNMKSRY_ ENSG00000166483|ENST00000450114|WEE1;ENST00000524549.1_1_11:9597437-9598815:+|nuORF;nc|ENSG00000166483|P30291-2|WEE1 55.23464941255904 0.0494277333541689 2 {I|L}TESNMKSRY 10 0 + 93.953 0.0 0.0 7.6534 7.6534 91.135 0.0 0.0 0.0 77.7548378452309 2.9242982390206294 2.9242982390206294 9.164539485499262 0 0.2887254899964357 1.5228787452803376 1.2302046884880935 0.8494850021680094 + + {I|L}TESNMKSRY;{I|L}TESGGMKSRY;{I|L}TEYRR{NN|[MP]|[D{I|L}]|[EV]}Y;[RH]MKMNSE[VP];[RH]MKMGGSE[VP];{I|L}T[SG]{[DA]|[EG]}MKSRY;[RH]MKMNS[DP]{I|L};{I|L}T[SG]WMK[DP]{[HG]|PP};{I|L}[WM]NMKSRY;[RH]MKMGGS[DP]{I|L} 7.6534;6.9069;4.9882;4.75;4.0035;3.9886;3.9236;3.7088;3.3612;3.177 +;-;-;-;-;-;-;-;-;- + 420 + 1 2.131 75815.8 1.0 899 3053 3951 DOHH2_400M_050219_2,3954 DOHH2_400M_050219_2,3954,ITESNMKSRY True True ITESNMKSRY 19.44535 410.204455554485 886996.9375 3951.0 nc|ENSG00000166483|P30291-2|WEE1;;ENSG00000166483|ENST00000450114|WEE1;;ENST00000524549.1_1_11:9597437-9598815:+|nuORF 5.569531440734863 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3957 19.466 800.0 189680.0 25 0 50623.0 + 43658 YARLHPRAV 9 99 541.814539929941 1081.614526926682 2 541.8145629763603 MULTI CID FTMS 0 0 0 3956 116264.9765625 0.5067012136995176 -2 0.0292167663574218 1 Unmodified _YARLHPRAV_ ENSG00000221983|ENST00000442744|UBA52 57.47134341890925 0.0274820932774257 2 V[YQ]{I|L}H 5 7 31.964 0.0 0.0 2.9553 0.0 0.0 0.0 438.2464388483032 438.2464388483032 18.46961343140069 0.0 0.0 0.0 0 1.0269763493273798 0.0 0.0 0.4247425010840047 V[YQ]{I|L}H 2.9553 - 97 + 1 2.131 120332.2 0.6100000143051147 900 3055 3956 DOHH2_400M_050219_2,3957 DOHH2_400M_050219_2,3957,YARLHPRAV True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3958 19.479 800.0 116130.0 25 0 9973.6 -1 DSPEEAYCC 9 113 565.6914249180169 1129.3682969028337 2 565.6921874880791 MULTI CID FTMS 0 0 0 3956 114333.171875 0.530369238695342 -9 0.1514739990234375 2 2 Carbamidomethyl (C) _DSPEEAYC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000394275.6_1_15:91477270-91478348:+|nuORF 16.942295170755138 0.3780752226737986 2 NY 2 -1 18.315 0.0 0.0 1.6217 0.0 0.0 834.2520194136912 0.0 834.2520194136912 0.0 8.637758878497168 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 NY 1.6217 - 142 + 1 2.131 70187.6 0.6299999952316284 901 3055 3956 DOHH2_400M_050219_2,3958 DOHH2_400M_050219_2,3958,DSPEEAYCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 3959 19.493 800.0 116410.0 25 0 24516.0 + 22993 LSGWIPQTTR 10 107 579.8146292346736 1157.614705536147 2 579.8151733279228 MULTI CID FTMS 0 0 0 3956 87695.7265625 1.0 0 0.0 3 Unmodified _LSGWIPQTTR_ REV__ENSG00000117593|ENST00000649689|DARS2 12.240655878213236 0.6421556946785427 2 {I|L} 1 -1 15.217 0.0 0.0 1.3145 0.0 0.0 1026.5199617390751 0.0 1026.5199617390751 0.0 7.117581349478641 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.3145 + + 44 + 1 2.131 73464.0 0.5600000023841858 902 3055 3956 DOHH2_400M_050219_2,3959 DOHH2_400M_050219_2,3959,LSGWIPQTTR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3960 19.507 800.0 141460.0 25 0 22002.0 + 10489 FTSGEHTNY 9 111 528.2252948172836 1054.4360367013671 2 528.2255737185478 MULTI CID FTMS 0 0 0 3956 86848.1875 0.8218669918085133 -1 0.0038433074951171 4 Unmodified _FTSGEHTNY_ ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 49.93300154707207 0.0405168250806675 2 {M(Oxidation (M))|F}T[C(Carbamidomethyl (C))H]{[CP]|[EA]}KY 8 5 + 37.758 0.0 0.0 3.5808 3.5808 79.621 0.0 0.0 0.0 23.39927651772173 4.2255342974912935 4.2255342974912935 9.835331758233249 0 0.4247425010840047 0.0 0.6861818737241735 0.805462187404089 {M(Oxidation (M))|F}T[C(Carbamidomethyl (C))H]{[CP]|[EA]}KY;YY{[QG]|[NA]}[HA]STE;{M(Oxidation (M))|F}TS[MD][RD]SP;{[CP]|[EA]}[W{M(Oxidation (M))|F}]WSTE;[HT][DG]T[HA]STE;[HT][YN]{[CT]|[{M(Oxidation (M))|F}G]}STE;[HT][SG]E[HA]STE;{[QS]|[NT]}{[WN]|[YH]}{[CT]|[{M(Oxidation (M))|F}G]}STE;[TP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[MD]STE;[HT][YN][YQ]TE 3.5808;2.6481;2.4152;2.2847;2.2182;2.169;1.9327;1.765;1.6246;1.5546 -;-;-;-;-;-;-;-;-;- 254 + 1 2.131 88852.7 0.5600000023841858 903 3055 3956 DOHH2_400M_050219_2,3960 DOHH2_400M_050219_2,3960,FTSGEHTNY True True FTSGEHTNY 19.507063 528.225573718548 535248.375 3956.0 ENSG00000119912|ENST00000265986|IDE;;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 6.367664972941081 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3962 19.516 350.0 150100.0 25 0 13527.0 + 4794 DENPDKSTL 9 91 509.7377828639908 1017.4610127947816 2 509.7380859255791 MULTI CID FTMS 0 0 0 3961 120852.6640625 0.3178183547723682 5 -0.0966987609863281 1 Unmodified _DENPDKSTL_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 26.268140514670165 0.1969607489560049 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NPD[KS]T{I|L} 9 0 + 24.9 0.0 0.0 2.4472 2.4472 76.546 0.0 0.0 0.0 5.0565842292838425 6.655462488490688 5.0565842292838425 9.208187539523752 0 0.0 0.0 0.3807196863200844 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NPD[KS]T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGPD[KS]T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N[W{I|L}][DN]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YY[KS]T{I|L} 2.4472;1.5422;1.2464;0.35826 +;-;-;- + 164 + 1 2.131 47381.0 1.0 904 3056 3961 DOHH2_400M_050219_2,3962 DOHH2_400M_050219_2,3962,DENPDKSTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3963 19.52 197.0 333980.0 25 0 20632.0 + 6889 EEERTRQGW 9 102 397.5231443032447 1189.547603509934 3 397.5228759646416 MULTI CID FTMS 0 0 0 3961 215659.84375 0.599253051897784 -8 0.1722087860107422 2 Unmodified _EEERTRQGW_ ENSG00000100591|ENST00000216479|AHSA1;ENST00000556369.1_3_14:77935388-77935589:+|nuORF 9.5439744041441 0.5815088571869578 2 EEE 3 6 27.846 0.0 0.0 2.3409 0.0 0.0 0.0 799.395483488882 799.395483488882 9.262329439905791 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.5 0.0 + EEE 2.3409 + + 68 + 1 2.131 55114.3 1.0 905 3056 3961 DOHH2_400M_050219_2,3963 DOHH2_400M_050219_2,3963,EEERTRQGW False True EEERTRQGW 19.519708 397.522875964642 1849545.875 3961.0 ENST00000556369.1_3_14:77935388-77935589:+|nuORF;;ENSG00000100591|ENST00000216479|AHSA1 4.039671500523885 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3964 19.529 544.0 260290.0 25 0 92284.0 -1 0 156 380.192815871848 379.185539405248 1 380.1901733279228 MULTI CID FTMS 0 0 0 3961 119520.625 0.8107044545757949 2 -0.0261993408203125 3 2 Y 1 -1 15.485 0.0 0.0 4.0836 0.0 0.0 198.11151704372296 0.0 198.11151704372296 0.0 4.0645667832142784 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 4.0836 - 21 + 1 2.131 113496.6 1.0 906 3056 3961 DOHH2_400M_050219_2,3964 DOHH2_400M_050219_2,3964, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3967 19.55 800.0 139980.0 25 0 35812.0 + 6890 EEERTRQGW 9 96 595.7814616676584 1189.5483704021167 2 595.7816650271416 MULTI CID FTMS 0 0 0 3966 125156.75 0.7043133082589418 -7 0.144876480102539 1 Unmodified _EEERTRQGW_ ENSG00000100591|ENST00000216479|AHSA1;ENST00000556369.1_3_14:77935388-77935589:+|nuORF 37.07464296494664 0.0915153923251136 2 EEERTRQGW 9 0 + 76.407 0.0 0.0 6.4232 6.4232 88.742 0.0 0.0 0.0 62.42716090790961 16.47817481888638 16.47817481888638 9.208187539523747 0 0.0 1.2218487496163564 0.0 0.4247425010840047 + + EEERTRQGW;EEERTR[AG]GW;EEERTR[HA]Y;EEE[VG]TREE{I|L};EEERT[VG]EE{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QRTRE[HC];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HM]TRQGW;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[AG]RTRE[HC];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HM]TR[AG]GW;{[ET]|[MV]}{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]RE[HC] 6.4232;5.6491;4.2593;3.0721;3.0721;2.7496;2.1394;1.9755;1.3654;0.86321 +;-;-;-;-;-;-;-;-;- + 265 + 1 2.131 89321.1 0.5899999737739563 907 3058 3966 DOHH2_400M_050219_2,3967 DOHH2_400M_050219_2,3967,EEERTRQGW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3968 19.553 194.0 248130.0 25 0 29575.0 17511 KPHVFELGV 9 66 513.2903035676047 1024.5660542020094 2 513.2901489138603 MULTI CID FTMS 0 0 0 3966 189317.046875 0.9990372665097126 -6 0.117349624633789 2 Unmodified _KPHVFELGV_ ENSG00000167178|ENST00000453268|ISLR2 10.073929032068715 0.563993802247229 2 KP 2 7 29.464 0.0 0.0 2.8757 0.0 0.0 0.0 796.3952730768186 796.3952730768186 27.47425010840047 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + KP 2.8757 + + 28 + 1 2.131 45148.6 1.0 908 3058 3966 DOHH2_400M_050219_2,3968 DOHH2_400M_050219_2,3968,KPHVFELGV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3971 19.562 111.0 1048900.0 25 0 93683.0 + 144 AALKKALAA 9 121 428.7844675546722 855.5543821761444 2 428.7842895388603 MULTI CID FTMS 0 0 0 3970 758731.3125 0.1284820009005391 -7 0.1374282836914062 1 Unmodified _AALKKALAA_ ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2 52.268347100219714 0.0353964759249114 2 AA{I|L}KK{I|L}AAA 9 2 + 52.97 0.0 0.0 6.1913 6.1913 85.589 0.0 0.0 0.0 6.907424266682945 29.67802475701326 6.907424266682945 7.7815125038364386 0 1.7440840204505514 1.5228787452803376 0.0 0.0 AA{I|L}KK{I|L}AAA;AA{I|L}KKA{I|L}AA;[{I|L}A]AKK{I|L}AAA;AA{I|L}AKK{I|L}AA;[{I|L}A]KKA{I|L}AAA;[{I|L}A]AKKA{I|L}AA;[K{I|L}][KA]A{I|L}AAA;[{I|L}A]KK{I|L}AAAA;[{I|L}A]KKAA{I|L}AA;[K{I|L}][KA]{I|L}AAAA 6.1913;5.2818;4.6237;3.8459;3.8067;3.7142;3.2439;3.103;2.8972;2.5402 -;+;-;-;-;-;-;-;-;- + 172 1 2.134 96706.9 1.0 909 3060 3970 DOHH2_400M_050219_2,3971 DOHH2_400M_050219_2,3971,AALKKALAA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3972 19.576 800.0 72390.0 25 0 5809.8 -1 EDQMPICVVCD 11 87 654.7656401061571 1307.516727279114 2 654.7657958865166 MULTI CID FTMS 0 0 0 3970 96224.359375 1.0 0 0.0 2 Carbamidomethyl (C) _EDQMPIC(Carbamidomethyl (C))VVCD_ ENSG00000204713|ENST00000377199|TRIM27;ENST00000481474.5_1_6:28876558-28891553:-|nuORF;nc|ENSG00000204713|P14373-2|TRIM27 8.155526934196011 0.8366696279279818 2 [YT]DEQN 6 -1 31.889 0.0 0.0 2.4389 0.0 0.0 0.0 554.2106109063203 554.2106109063203 13.930534213938088 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.3807196863200844 [YT]DEQN 2.4389 - 236 1 2.134 48486.5 0.5600000023841858 910 3060 3970 DOHH2_400M_050219_2,3972 DOHH2_400M_050219_2,3972,EDQMPICVVCD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3973 19.59 800.0 117670.0 25 0 53776.0 -1 ITTIINMKPP 10 83 572.3249908350288 0 572.3245117068291 PEAK CID FTMS 0 0 0 3970 84909.828125 0.3709194353115848 35 -0.7698268890380859 3 Oxidation (M) _ITTIINM(Oxidation (M))KPP_ ENSG00000198804|ENST00000361624|MT-CO1 3.944395688203298 0.3961065659209837 2 D 1 -1 5.6295 0.0 0.0 0.49268 0.0 0.0 928.5028736604888 96.0825441949828 1024.5854178554714 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 D 0.49268 - 18 + 1 2.134 79876.6 0.5899999737739563 911 3060 3970 DOHH2_400M_050219_2,3973 DOHH2_400M_050219_2,3973,ITTIINMKPP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3974 19.604 800.0 23506.0 25 0 1053.1 -1 0 49 977.4161084503972 2929.226495951392 3 977.7503539919852 MULTI CID FTMS 0 0 0 3970 76765.1953125 0.813871728591724 -2 0.0241050720214843 4 2 [KQ]E 3 -1 15.942 0.0 0.0 0.54424 0.0 0.0 0.0 2541.00692743016 2541.00692743016 8.952424927286843 0.0 0.0 0.0 0 0.5 0.0 0.0 0.5 [KQ]E 0.54424 - 9 1 2.134 23941.6 0.4300000071525574 912 3060 3970 DOHH2_400M_050219_2,3974 DOHH2_400M_050219_2,3974, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3976 19.609 46.0 1662100.0 25 0 187070.0 + 43657 YARLHPRAV 9 90 361.5455804540293 1081.6149119622878 3 361.5453063845634 MULTI CID FTMS 0 0 0 3975 1115767.5 0.793371196970909 1 -0.0116634368896484 1 Unmodified _YARLHPRAV_ ENSG00000221983|ENST00000442744|UBA52 30.63653989081413 0.1413794767160703 2 VYQ{I|L}HV 6 6 39.882 0.0 0.0 3.6873 0.0 0.0 0.0 339.1777437799438 339.1777437799438 32.89258754269092 0.0 0.0 0.0 0 1.242992819099939 0.0 0.0 0.3807196863200844 VYQ{I|L}HV 3.6873 - 56 + 1 2.134 67891.0 1.0 913 3061 3975 DOHH2_400M_050219_2,3976 DOHH2_400M_050219_2,3976,YARLHPRAV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3977 19.61 60.0 948230.0 25 0 84190.0 -1 ESATITCLV 9 87 497.2496145739215 992.484676214643 2 497.2497131228447 MULTI CID FTMS 0 0 0 3975 906521.0 0.7980402908575994 2 -0.0154914855957031 2 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 57.47134341890925 0.0274820932774257 2 {[ES]|[DT]|[{I|L}C]}ATP{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 9 -1 + 51.449 0.0 0.0 5.1839 5.1839 87.761 0.0 0.0 0.0 21.795606106491903 4.762036441594191 4.762036441594191 19.38879389667526 0 1.2302046884880935 0.0 0.805462187404089 0.0 {[ES]|[DT]|[{I|L}C]}ATP{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}ATVV[TA]{[ES]|[DT]|[{I|L}C]};[TA]DTVV[TA]{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}ATP{I|L}[YG][VG];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG]P{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[MG]|[TS]}{[CP]|[EA]}VV[TA]{[ES]|[DT]|[{I|L}C]} 5.1839;3.2303;3.1287;3.021;2.0551;0.7525 -;-;-;-;-;- 182 + 1 2.134 47826.9 1.0 914 3061 3975 DOHH2_400M_050219_2,3977 DOHH2_400M_050219_2,3977,ESATITCLV False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 3978 19.615 295.0 254710.0 25 0 32800.0 + 5840 DPSVKRTL 8 99 458.2672293375172 914.5199057418344 2 458.2686645388603 MULTI CID FTMS 0 0 0 3975 111651.984375 0.7223995377922097 -4 0.074533462524414 3 Unmodified _DPSVKRTL_ ENSG00000241370|ENST00000442966|RPP21;ENST00000466327.5_1_6:30312945-30313451:+|nuORF;ENST00000473266.1_1_6:30313175-30314584:+|nuORF;ENST00000498414.5_1_6:30313175-30313451:+|nuORF;nc|ENSG00000241370|Q9H633-2|RPP21;nc|ENSG00000241370|Q9H633-3|RPP21;nc|ENSG00000241370|Q9H633-4|RPP21 32.78568957990786 0.3549862272178655 2 DPSVK 5 3 65.093 0.0 0.0 7.1178 0.0 0.0 0.0 385.2205294244751 385.2205294244751 55.76117462609625 0.0 0.0 0.0 0 0.6382104921644451 2.0 0.4247425010840047 0.0 + DPSVK 7.1178 + + 99 + 1 2.134 65297.1 1.0 915 3061 3975 DOHH2_400M_050219_2,3978 DOHH2_400M_050219_2,3978,DPSVKRTL False True DPSVKRTL 19.615474 458.26866453886 781177.75 3975.0 nc|ENSG00000241370|Q9H633-2|RPP21;;nc|ENSG00000241370|Q9H633-4|RPP21;;ENST00000473266.1_1_6:30313175-30314584:+|nuORF;;ENSG00000241370|ENST00000442966|RPP21;;ENST00000466327.5_1_6:30312945-30313451:+|nuORF;;nc|ENSG00000241370|Q9H633-3|RPP21;;ENST00000498414.5_1_6:30313175-30313451:+|nuORF 5.32287089029948 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3981 19.636 800.0 79451.0 25 0 6105.6 + -1 TGDVHKMCVY 10 88 613.2702015907893 1224.5258502483784 2 613.2701293826103 MULTI CID FTMS 0 0 0 3980 40522.6953125 0.4074316357332651 1 -0.0163764953613281 1 Carbamidomethyl (C),Oxidation (M) _TGDVHKM(Oxidation (M))C(Carbamidomethyl (C))VY_ REV__ENSG00000157150|ENST00000287814|TIMP4 24.020572477871973 0.4289996903560794 2 {[SA]|[TG]}DPDAET 8 -1 56.503 0.0 0.0 4.6142 0.0 0.0 0.0 435.2010897272094 435.2010897272094 31.096529140335463 0.0 0.0 0.0 0 0.3807196863200844 1.154901959985743 0.0 0.0 {[SA]|[TG]}DPDAET 4.6142 - 230 + 1 2.134 52514.7 0.6200000047683716 916 3063 3980 DOHH2_400M_050219_2,3981 DOHH2_400M_050219_2,3981,TGDVHKMCVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3984 19.647 261.0 382230.0 25 0 58717.0 42533 VTLPIMWF 8 95 503.7749147667744 1005.5352766003488 2 503.7746154665947 MULTI CID FTMS 0 0 0 3983 221856.65625 0.97113241213124 1 -0.02838134765625 1 Unmodified _VTLPIMWF_ ENSG00000205060|ENST00000378509|SLC35B4;nc|ENSG00000205060|Q969S0-3|SLC35B4 36.46614268402704 0.2934124525509074 2 VT{I|L}DTTQ[KT] 9 6 + 73.326 0.0 0.0 7.2922 7.2922 91.227 0.0 0.0 0.0 61.54290120696308 7.624562618571247 7.624562618571247 9.208187539523747 0 0.4247425010840047 2.0 1.3494850021680094 0.0 VT{I|L}DTTQ[KT];VT{I|L}DTT[AG][KT];VT{I|L}DTT[{I|L}P]{M(Oxidation (M))|F};VT{I|L}[WM]Q[KT];VT{I|L}DT[YV]PV;VT{I|L}DT{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L};VT{I|L}[HQ][YV]{M(Oxidation (M))|F};VT{I|L}[WM][AG][KT];VT{I|L}[HA]G[YV]{M(Oxidation (M))|F};VT{I|L}[WM][{I|L}P]{M(Oxidation (M))|F} 7.2922;6.3764;6.3205;6.0771;6.0008;5.9746;5.2817;5.156;4.8527;4.6829 -;-;-;-;-;-;-;-;-;- 249 + 1 2.134 80143.7 1.0 917 3065 3983 DOHH2_400M_050219_2,3984 DOHH2_400M_050219_2,3984,VTLPIMWF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3985 19.655 426.0 176770.0 25 0 66643.0 -1 0 75 508.2937355726838 507.2864591060838 1 508.2942077517509 MULTI CID FTMS 0 0 0 3983 98283.0234375 0.082163371117178 -12 0.219644546508789 2 2 {I|L} 1 -1 10.278 0.0 0.0 2.026 0.0 0.0 376.1913796156525 0.0 376.1913796156525 0.0 4.748714656807795 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.026 - 30 + 1 2.134 63428.1 1.0 918 3065 3983 DOHH2_400M_050219_2,3985 DOHH2_400M_050219_2,3985, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3986 19.66 303.0 353460.0 25 0 100250.0 -1 0 88 474.2903566396579 473.2830801730579 1 474.2883178591728 MULTI CID FTMS 0 0 0 3983 150212.484375 0.4687098046538477 42 -0.9497833251953124 3 2 [{I|L}T][Q{I|L}] 4 -1 + 26.652 0.0 0.0 5.6313 5.6313 90.436 0.0 0.0 0.0 8.580147979551594 15.23213332973403 8.580147979551594 26.652116611560032 0 0.0 2.0 0.2215141619232908 0.0 [{I|L}T][Q{I|L}] 5.6313 - 42 1 2.134 87422.1 1.0 919 3065 3983 DOHH2_400M_050219_2,3986 DOHH2_400M_050219_2,3986, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3987 19.668 450.0 288170.0 25 0 42167.0 + 13225 HGYVKQSL 8 128 466.2536065328593 0 466.2537109255791 PEAK CID FTMS 0 0 0 3983 114547.5234375 0.9200291380652088 -1 0.0039539337158203 4 Unmodified _HGYVKQSL_ ENSG00000115365|ENST00000450366|LANCL1 42.09456458481378 0.1274309217205264 2 SQKVY 5 7 25.296 0.0 0.0 2.7186 0.0 0.0 131.09601644371963 191.05793176822505 322.1539482119447 0.0 0.0 0.0 0.0 0 0.8045611563368829 0.0 0.3807196863200844 0.0 SQKVY 2.7186 - 80 + 1 2.134 100228.5 1.0 920 3065 3983 DOHH2_400M_050219_2,3987 DOHH2_400M_050219_2,3987,HGYVKQSL True True HGYVKQSL 19.668068 466.253710925579 673276.375 3983.0 ENSG00000115365|ENST00000450366|LANCL1 3.9693193435668954 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3989 19.678 399.0 198960.0 25 0 23082.0 -1 0 91 547.0410205555311 2184.134976355724 4 547.2919189333916 MULTI CID FTMS 0 0 0 3988 94326.40625 0.8848100540407917 1 -0.0511512756347656 1 2 APY 3 -1 49.693 0.0 0.0 2.2752 0.0 0.0 0.0 1849.9582002226364 1849.9582002226364 35.08864383480216 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 APY 2.2752 - 61 + 1 2.134 67515.9 1.0 921 3066 3988 DOHH2_400M_050219_2,3989 DOHH2_400M_050219_2,3989, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3990 19.692 800.0 71804.0 25 0 8585.4 + -1 QEADSGKGTVSY 12 89 621.2858282531696 1240.557103573139 2 621.2863036990166 MULTI CID FTMS 0 0 0 3988 126076.46875 1.0 0 0.0 2 Carbamidomethyl (C) _QEKQAAC(Carbamidomethyl (C))PFY_ nc|ENSG00000101868|P09884|POLA1;ENSG00000101868|ENST00000379068|POLA1 24.020572477871973 0.4289996903560794 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A 3 -1 25.176 0.0 0.0 2.0294 0.0 0.0 0.0 909.3968307062048 909.3968307062048 1.4646872391696064 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3252574989159953 0.8494850021680094 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A 2.0294 - 210 1 2.134 50114.1 0.5699999928474426 922 3066 3988 DOHH2_400M_050219_2,3990 DOHH2_400M_050219_2,3990,QEKQAACPFY False False QEADSGKGTVSY 19.69152 621.286303699017 436617.8125 3988.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1 7.139280319213867 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3991 19.705 800.0 79340.0 25 0 4723.2 -1 0 70 874.6424522748729 4368.175879041364 5 875.0407592654228 MULTI CID FTMS 0 0 0 3988 66961.34375 0.7413594864159737 -3 0.0487117767333984 3 2 PPGQN 5 -1 27.959 0.0 0.0 0.64006 0.0 0.0 2664.3537558613816 1207.5802706354127 3871.934026496794 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPGQN 0.64006 - 178 + 1 2.134 55788.7 0.3899999856948852 923 3066 3988 DOHH2_400M_050219_2,3991 DOHH2_400M_050219_2,3991, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 3992 19.719 800.0 117650.0 25 0 9265.0 + -1 SSYGGAGGY 9 57 818.0196586814069 4085.0619110740345 5 818.4203979372978 MULTI CID FTMS 0 0 0 3988 58894.3203125 1.0 0 0.0 4 nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2;ENSG00000117748|ENST00000373912|RPA2 2 YGQ[YN] 5 -1 26.51 0.0 0.0 0.64896 0.0 0.0 3441.800716909979 0.0 3441.800716909979 0.0 11.263327241663315 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 YGQ[YN] 0.64896 - 58 + 1 2.134 72505.0 0.3899999856948852 924 3066 3988 DOHH2_400M_050219_2,3992 DOHH2_400M_050219_2,3992, False False SSYGGAGGY 19.719182 818.420397937298 240471.578125 3988.0 nc|ENSG00000117748|P15927-2|RPA2;;nc|ENSG00000117748|P15927-3|RPA2;;ENSG00000117748|ENST00000373912|RPA2 0.6970878796031078 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 3994 19.736 800.0 98051.0 25 0 16878.0 + 43659 YARLHPRAV 9 90 541.814539929941 1081.614526926682 2 541.8144409060478 MULTI CID FTMS 0 0 0 3993 48945.12890625 0.2133106370872083 10 -0.2839889526367187 1 Unmodified _YARLHPRAV_ ENSG00000221983|ENST00000442744|UBA52 20.453626601364224 0.2830276176381075 2 V[YQ]{I|L}H{[VA]|[{I|L}G]}W 8 6 23.148 0.0 0.0 2.1402 0.0 0.0 0.0 82.06685815982655 82.06685815982655 7.663800089887545 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 V[YQ]{I|L}H{[VA]|[{I|L}G]}W 2.1402 - 119 + 1 2.134 66546.1 0.5199999809265137 925 3067 3993 DOHH2_400M_050219_2,3994 DOHH2_400M_050219_2,3994,YARLHPRAV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3995 19.741 236.0 311960.0 25 0 42620.0 + 6989 EEIPKRETY 9 74 582.7985855558079 1163.5826181784155 2 582.7985107302666 MULTI CID FTMS 0 0 0 3993 228819.09375 0.9734580135541016 -2 0.0795326232910156 2 Unmodified _EEIPKRETY_ ENSG00000116221|ENST00000360840|MRPL37;ENST00000490670.1_1_1:54670749-54673061:+|nuORF 49.55428908609986 0.0413471690215031 2 EE{I|L}PK{[RE]|[WV]}TY 9 0 + 61.634 0.0 0.0 5.2969 5.2969 87.839 0.0 0.0 0.0 42.65417168842156 10.691446804494902 10.691446804494902 17.513735776358544 0 1.424742501084005 1.5228787452803376 0.3807196863200844 0.4247425010840047 + + EE{I|L}PK{[RE]|[WV]}TY;[DP]{I|L}[KQ]NP{I|L}[HC];[DP]{I|L}[KQ]GGP{I|L}[HC];[DP]{I|L}[KQ]N{[WT]|[RM]}Y 5.2969;3.7917;3.0041;2.0437 +;-;-;- + 83 + 1 2.134 59562.4 1.0 926 3067 3993 DOHH2_400M_050219_2,3995 DOHH2_400M_050219_2,3995,EEIPKRETY True True EEIPKRETY 19.740794 582.798510730267 1563366.625 3993.0 ENSG00000116221|ENST00000360840|MRPL37;;ENST00000490670.1_1_1:54670749-54673061:+|nuORF 6.281280835469564 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3996 19.746 313.0 356020.0 25 0 27254.0 + 139 AALGAKKY 8 118 411.2479338534336 820.4813147736671 2 411.2473632693291 MULTI CID FTMS 0 0 0 3993 147368.640625 0.2509449154269563 -3 0.0834865570068359 3 Unmodified _AALGAKKY_ REV__ENST00000555004.2_3_14:96554171-96554918:+|nuORF 13.50788311687929 0.7113601687236069 2 E{I|L}{I|L}RKY 6 -1 + 84.341 0.0 0.0 10.279 10.279 96.412 0.0 0.0 0.0 60.912311801574944 12.703037561203844 12.703037561203844 13.808135922807908 0 1.263632853717045 2.0 0.0 0.930884548956689 E{I|L}{I|L}RKY;E{I|L}{I|L}RYK;E{I|L}{I|L}RP{[HG]|PP};E{I|L}{I|L}YRK;{[QN]|[E{I|L}]|[KN]}{I|L}RKY 10.279;8.5965;8.1068;7.5868;6.9545 -;-;-;-;- 128 + 1 2.134 90427.0 1.0 927 3067 3993 DOHH2_400M_050219_2,3996 DOHH2_400M_050219_2,3996,AALGAKKY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 3997 19.754 405.0 189040.0 25 0 14021.0 + 7996 EMGGHHIV 8 110 440.2109680243795 878.407383115559 2 440.2108642458916 MULTI CID FTMS 0 0 0 3993 129668.421875 0.8211277979593852 -2 0.0795326232910156 4 Unmodified _EMGGHHIV_ ENSG00000165704|ENST00000298556|HPRT1 11.114462752807354 0.7467182956244686 2 Y 1 8 10.837 0.0 0.0 1.2338 0.0 0.0 697.3326893673153 0.0 697.3326893673153 0.0 0.1241179186251617 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2338 - 81 + 1 2.134 65047.2 1.0 928 3067 3993 DOHH2_400M_050219_2,3997 DOHH2_400M_050219_2,3997,EMGGHHIV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 3999 19.767 603.0 164340.0 25 0 15301.0 -1 SEDDRDSCM 9 126 565.6914249180169 1129.3682969028337 2 565.6924316287041 MULTI CID FTMS 0 0 0 3998 171308.578125 0.7946670128374568 4 -0.1394157409667968 1 Carbamidomethyl (C),Oxidation (M) _SEDDRDSC(Carbamidomethyl (C))M(Oxidation (M))_ ENSG00000167522|ENST00000301030|ANKRD11;ENST00000330736.9_1_16:89334888-89371640:-|nuORF 21.74664581756881 0.2544899275067181 2 PSNY 4 -1 33.791 0.0 0.0 2.9921 0.0 0.0 650.1668563396337 0.0 650.1668563396337 0.0 16.32429542452661 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.6747425010840047 PSNY 2.9921 - 176 + 1 2.134 79175.4 1.0 929 3068 3998 DOHH2_400M_050219_2,3999 DOHH2_400M_050219_2,3999,SEDDRDSCM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4000 19.772 271.0 299600.0 25 0 28137.0 + + 8284 EQIKKTEL 8 107 494.7873823980261 987.5602118628524 2 494.7864257693291 MULTI CID FTMS 0 0 0 3998 133116.09375 0.1144875768367858 -4 0.1179866790771484 2 Unmodified _EQLKTKEL_ ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A 36.12702656103203 0.299085846329477 2 {I|L} 1 -1 19.604 0.0 0.0 1.9851 0.0 0.0 856.4651476312101 0.0 856.4651476312101 0.0 2.169081132677704 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 1.9851 + + 144 + 1 2.134 65402.5 1.0 930 3068 3998 DOHH2_400M_050219_2,4000 DOHH2_400M_050219_2,4000,EQLKTKEL False False EQIKKTEL 19.771736 494.786425769329 4451799.5 3998.0 ENSG00000107581|ENST00000369144|EIF3A;;nc|ENSG00000107581|Q14152-2|EIF3A 1.8790884812672928 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4001 19.783 623.0 165320.0 25 0 15227.0 + 25173 MSEDKPQDY 9 123 556.7317095785213 1111.4488662238423 2 556.7311279177666 MULTI CID FTMS 0 0 0 3998 89665.28125 0.0457785659953217 -5 0.1343631744384765 3 Unmodified _MSEDKPQDY_ ENSG00000168036|ENST00000349496|CTNNB1;ENST00000465552.1_1_3:41277978-41278230:+|nuORF;ENST00000485265.1_1_3:41277322-41278230:+|nuORF 57.24910588100465 0.0276051374632116 2 MSEDK[QP]DY 9 0 + 91.001 0.0 0.0 8.1876 8.1876 94.623 0.0 0.0 0.0 36.47817481888637 12.5404627391503 12.5404627391503 12.5404627391503 0 1.4436726795685342 2.0 0.4247425010840047 0.8494850021680094 + + MSEDK[QP]DY;MSEDK{[YD]|[{M(Oxidation (M))|F}M]}PQ;MSEDK{[YD]|[{M(Oxidation (M))|F}M]}QP;MSEDK{[YD]|[{M(Oxidation (M))|F}M]}AGP;MSWW[QP]DY;MSWW{[YD]|[{M(Oxidation (M))|F}M]}PQ;MSWW{[YD]|[{M(Oxidation (M))|F}M]}QP;MS[R{M(Oxidation (M))|F}]M{[ES]|[DT]|[{I|L}C]}PQ;MS[R{M(Oxidation (M))|F}]M{[ES]|[DT]|[{I|L}C]}QP;{[QD]|[EN]|[WG]|[KD]|[RS]}{[YD]|[{M(Oxidation (M))|F}M]}KDE{[CP]|[EA]} 8.1876;7.0593;6.9809;5.9287;5.8741;4.7458;4.6674;3.9505;3.8721;3.7153 +;-;-;-;-;-;-;-;-;- + 628 + 1 2.134 83890.7 1.0 931 3068 3998 DOHH2_400M_050219_2,4001 DOHH2_400M_050219_2,4001,MSEDKPQDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4003 19.79 261.0 288460.0 25 0 33314.0 -1 EEKLMMLQH 9 97 397.5231443032447 1189.547603509934 3 397.5228149294853 MULTI CID FTMS 0 0 0 4002 97775.09375 0.2716872196068232 5 -0.1808662414550781 1 2 Oxidation (M) _EEKLM(Oxidation (M))M(Oxidation (M))LQH_ ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A 7.101721422024254 0.6667666702315642 2 EE 2 -1 21.454 0.0 0.0 1.8035 0.0 0.0 0.0 928.4427129130426 928.4427129130426 2.870156338638594 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 EE 1.8035 + + 23 + 1 2.134 63786.8 1.0 932 3069 4002 DOHH2_400M_050219_2,4003 DOHH2_400M_050219_2,4003,EEKLMMLQH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4004 19.794 185.0 374870.0 25 0 86792.0 + -1 IQRLETMK 8 75 517.7870708753914 0 517.7866088747978 PEAK CID FTMS 0 0 0 4002 190075.8125 0.7496569499714215 1 -0.0408763885498046 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 13.90604991867851 0.4976509803484061 2 T 1 -1 19.604 0.0 0.0 1.8968 0.0 0.0 293.1412061044951 636.3480856298936 929.4892917343886 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.0 T 1.8968 + + 82 + 1 2.134 60539.9 1.0 933 3069 4002 DOHH2_400M_050219_2,4004 DOHH2_400M_050219_2,4004,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4005 19.796 112.0 739810.0 25 0 293290.0 + 5505 DLVEPSLSL 9 57 486.7650639620064 971.5155749908128 2 486.7646972537041 MULTI CID FTMS 0 0 0 4002 434005.78125 0.9085503404957695 -1 0.0289268493652343 3 Unmodified _DLVEPSLSL_ REV__ENSG00000053747|ENST00000313654|LAMA3;REV__nc|ENSG00000053747|Q16787-1|LAMA3;REV__nc|ENSG00000053747|Q16787-3|LAMA3;REV__nc|ENSG00000053747|Q16787-4|LAMA3 10.823927491677226 0.5436922275383211 2 D{I|L} 2 -1 25.217 0.0 0.0 2.5956 0.0 0.0 0.0 740.3813670556394 740.3813670556394 13.622731327798547 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 D{I|L} 2.5956 + + 20 + 1 2.134 68229.7 1.0 934 3069 4002 DOHH2_400M_050219_2,4005 DOHH2_400M_050219_2,4005,DLVEPSLSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4006 19.81 800.0 136350.0 25 0 16537.0 -1 VTDSMQCFND 10 126 616.7315584278997 1231.4485639225993 2 616.7314941287041 MULTI CID FTMS 0 0 0 4002 139565.40625 0.4639763524509565 -3 0.1145782470703125 4 Carbamidomethyl (C),Oxidation (M) _VTDSM(Oxidation (M))QC(Carbamidomethyl (C))FND_ nc|ENSG00000172728|Q6P4F1-2|FUT10 19.256988751693697 0.5244284437930726 2 {[TV]|[{I|L}S]}D 3 -1 37.068 0.0 0.0 3.0102 0.0 0.0 0.0 913.2827825739568 913.2827825739568 15.25351617579068 0.0 0.0 0.0 0 0.5 2.0 0.7887254899964358 0.0 {[TV]|[{I|L}S]}D 3.0102 + + 304 1 2.134 86705.7 0.6299999952316284 935 3069 4002 DOHH2_400M_050219_2,4006 DOHH2_400M_050219_2,4006,VTDSMQCFND False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 4007 19.824 800.0 179200.0 25 0 12240.0 + 40605 VLAEKRQL 8 134 478.7982538158794 955.5819546985588 2 478.7978393435478 MULTI CID FTMS 0 0 0 4002 103695.5390625 0.6444113880687101 -1 0.0289268493652343 5 Unmodified _VLAEKRQL_ ENSG00000167721|ENST00000301364|TSR1 32.30548876998284 0.3644845974844379 2 V{I|L}AEK 5 3 72.153 0.0 0.0 7.5507 0.0 0.0 0.0 412.2314852350219 412.2314852350219 61.4399144187623 0.0 0.0 0.0 0 1.0387254899964358 2.0 0.0 0.3807196863200844 + V{I|L}AEK 7.5507 + + 216 + 1 2.134 113195.2 0.4900000095367431 936 3069 4002 DOHH2_400M_050219_2,4007 DOHH2_400M_050219_2,4007,VLAEKRQL False True VLAEKRQL 19.823548 478.797839343548 545832.25 4002.0 ENSG00000167721|ENST00000301364|TSR1 0.5931890116383632 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4009 19.828 20.0 2517400.0 25 0 219290.0 + 145 AALKKALAA 9 72 428.7844675546722 855.5543821761444 2 428.7844421267509 MULTI CID FTMS 0 0 0 4008 2716576.0 0.4600193959681651 3 -0.1046085357666015 1 Unmodified _AALKKALAA_ ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2 61.357469665136826 0.0253304979873734 2 AA{I|L}K 4 5 49.941 0.0 0.0 5.8373 0.0 0.0 0.0 469.2771395318969 469.2771395318969 15.595989204918297 0.0 0.0 0.0 0 1.1549471895720984 1.6989700043360187 0.0 0.0 + AA{I|L}K 5.8373 + + 192 + 1 2.131 47271.3 1.0 937 3070 4008 DOHH2_400M_050219_2,4009 DOHH2_400M_050219_2,4009,AALKKALAA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4010 19.842 800.0 42842.0 25 0 3624.8 -1 0 32 1187.8765011594312 0 1187.877856433392 PEAK CID FTMS 0 0 0 4008 62371.51171875 0.7137197499194964 1 -0.0510807037353515 2 2 A 1 -1 1.5938 0.0 0.0 0.067143 0.0 0.0 1190.272703391325 1109.4050997369752 2299.6778031283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.067143 - 1 + 1 2.131 30414.0 0.3600000143051147 938 3070 4008 DOHH2_400M_050219_2,4010 DOHH2_400M_050219_2,4010, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4011 19.848 339.0 517280.0 25 0 82819.0 -1 0 44 687.7259101551954 3433.5931684429765 5 687.9268676638603 MULTI CID FTMS 0 0 0 4008 276789.9375 1.0 0 0.0 3 2 Q 1 -1 0.9691 0.0 0.0 0.028224 0.0 0.0 2618.227703210358 684.2922457330686 3302.5199489434267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.028224 - 2 + 1 2.131 131465.0 1.0 939 3070 4008 DOHH2_400M_050219_2,4011 DOHH2_400M_050219_2,4011, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4012 19.851 163.0 471020.0 25 0 60205.0 + 6970 EEIGGGQKV 9 96 458.7402768179083 915.4660007026166 2 458.7401000857353 MULTI CID FTMS 0 0 0 4008 217257.25 0.4651437197289491 -1 0.0408763885498046 4 Unmodified _EEIGGGQKV_ ENSG00000136167|ENST00000323076|LCP1;nc|ENSG00000136167|P13796-2|LCP1 39.957323273325 0.0756908302845263 2 EE{I|L}GS 5 5 41.242 0.0 0.0 4.5051 0.0 0.0 0.0 397.2241304986938 397.2241304986938 21.928279564633343 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3054621874040891 0.0 EE{I|L}GS 4.5051 - 225 + 1 2.131 63613.9 1.0 940 3070 4008 DOHH2_400M_050219_2,4012 DOHH2_400M_050219_2,4012,EEIGGGQKV True True EEIGGGQKV 19.851458 458.740100085735 1757291.5 4008.0 ENSG00000136167|ENST00000323076|LCP1;;nc|ENSG00000136167|P13796-2|LCP1 5.876072565714519 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4013 19.86 494.0 297170.0 25 0 31089.0 + 670 AEMETQKEKI 10 134 603.8066671124801 1205.59878129176 2 603.8052245974541 MULTI CID FTMS 0 0 0 4008 143614.78125 0.4597155122811594 -2 0.069803237915039 5 Unmodified _AEMETQKEKI_ ENSG00000113810|ENST00000357388|SMC4;ENST00000467263.1_1_3:160130128-160131402:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 128.57297698046145 0.0002163614560519 2 AEMETQKEK{I|L} 10 0 + 116.1 0.0 0.0 9.6298 9.6298 82.375 0.0 0.0 0.0 31.13621890751532 0.2632893872234945 0.2632893872234945 0.2632893872234945 0 1.8807196863200843 1.6989700043360187 2.08889035263304 0.8366968715561641 + + AEMETQKEK{I|L};AEMETQKE{I|L}K;AEMEAASKEK{I|L};AEMEAASKE{I|L}K;AEMET[AG]KEK{I|L};AEMET[AG]KE{I|L}K;AEM[RD]SKEK{I|L};AEM[RD]SKE{I|L}K;AEM{M(Oxidation (M))|F}[NP]KEK{I|L};AEM{M(Oxidation (M))|F}[NP]KE{I|L}K 9.6298;9.6079;9.2379;9.2161;8.8696;8.8477;8.1372;8.1154;7.1204;7.0986 +;-;-;-;-;-;-;-;-;- + 3286 + 1 2.131 108353.9 1.0 941 3070 4008 DOHH2_400M_050219_2,4013 DOHH2_400M_050219_2,4013,AEMETQKEKI True True AEMETQKEKI 19.860183 603.805224597454 1154639.875 4008.0 ENST00000467263.1_1_3:160130128-160131402:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 6.6318182945251465 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4014 19.866 304.0 279010.0 25 0 31537.0 + 35200 SSDKYGDTSY 10 112 561.7326289155693 1121.4507048979383 2 561.7330810427666 MULTI CID FTMS 0 0 0 4008 136541.0625 0.3288824115728181 -1 0.0408763885498046 6 Unmodified _SSDKYGDTSY_ ENSG00000109445|ENST00000262990|ZNF330 81.9152076656658 0.0154982280583276 2 {[CA]|SS}DKYGDTSY 10 0 + 67.341 0.0 0.0 6.0048 6.0048 82.853 0.0 0.0 0.0 5.4390028798052015 42.69947067701486 5.4390028798052015 5.810384486277798 0 1.8807196863200843 0.0 1.8001648626366045 0.0 + + {[CA]|SS}DKYGDTSY;{[C(Carbamidomethyl (C))E]|[WC]}KYGDTSY;{[CA]|SS}DKYGESSY;{[CA]|SS}D{M(Oxidation (M))|F}SRSSSY;{[CA]|SS}DKYWSSY;{[DS]|[MA]|[CV]|TT}SKYGDTSY;{[C(Carbamidomethyl (C))E]|[WC]}KYGESSY;{[CA]|SS}D{M(Oxidation (M))|F}S[QT]TSY;{[CA]|SS}D{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]TSY;{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}SRSSSY 6.0048;5.4867;5.4287;5.1362;5.1146;4.9498;4.9106;4.7342;4.7126;4.6181 +;-;-;-;-;-;-;-;-;- + 2267 1 2.131 65650.0 1.0 942 3070 4008 DOHH2_400M_050219_2,4014 DOHH2_400M_050219_2,4014,SSDKYGDTSY True True SSDKYGDTSY 19.865742 561.733081042767 1835049.25 4008.0 ENSG00000109445|ENST00000262990|ZNF330 9.003389676411947 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4015 19.875 498.0 116170.0 25 0 7584.4 + + -1 STMSTNGIPR 10 97 540.7527564760093 1079.4909600188184 2 540.7521850466728 MULTI CID FTMS 0 0 0 4008 108079.96875 1.0 0 0.0 7 Oxidation (M) _M(Oxidation (M))SCTAWLRP_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 16.942295170755138 0.3780752226737986 2 {[MG]|[TS]}{M(Oxidation (M))|F}STDG{I|L}RP 10 -1 {[MG]|[TS]} + + 53.542 5.2288 2.7801 4.9599 4.9599 55.446 0.0 0.0 0.0 0.0 37.11548792976544 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.4247425010840047 {[MG]|[TS]}{M(Oxidation (M))|F}STDG{I|L}RP 4.9599 - 213 + 1 2.131 52153.3 1.0 943 3070 4008 DOHH2_400M_050219_2,4015 DOHH2_400M_050219_2,4015,MSCTAWLRP False False STMSTNGIPR 19.874542 540.752185046673 0.0 4008.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 8.642284075419107 2.0 False 10.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 4017 19.879 82.0 547740.0 25 0 38298.0 -1 ESATITCLV 9 79 497.2496145739215 992.484676214643 2 497.2497741580009 MULTI CID FTMS 0 0 0 4016 468591.53125 0.4125165571367435 12 -0.2432441711425781 1 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 42.09456458481378 0.0639583784996157 2 {[ES]|[DT]|[{I|L}C]}AT 4 -1 23.193 0.0 0.0 2.3368 0.0 0.0 0.0 601.3018508574742 601.3018508574742 11.510234424404686 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.305462187404089 0.0 {[ES]|[DT]|[{I|L}C]}AT 2.3368 + + 96 1 2.131 41408.0 1.0 944 3071 4016 DOHH2_400M_050219_2,4017 DOHH2_400M_050219_2,4017,ESATITCLV False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 4018 19.893 800.0 225830.0 25 0 13105.0 + 10046 FPPLSAQLLP 10 230 361.5455804540293 1081.6149119622878 3 361.5454284548759 MULTI CID FTMS 0 0 0 4016 36427.80078125 0.0259021417175514 11 -0.2252216339111328 2 Unmodified _FPPLSAQLLP_ REV__nc|ENSG00000134824|O95864-2|FADS2 9.38312468134398 0.6832340498775793 2 [{I|L}T]QV[VS]{I|L}K 8 -1 27.767 0.0 0.0 2.5671 0.0 0.0 0.0 210.0432561024369 210.0432561024369 -0.2931302530214807 0.0 -0.2931302530214807 0.0 0 0.3494850021680094 1.6989700043360187 0.3807196863200844 0.0 [{I|L}T]QV[VS]{I|L}K 2.5671 - 353 1 2.131 145911.1 0.3899999856948852 945 3071 4016 DOHH2_400M_050219_2,4018 DOHH2_400M_050219_2,4018,FPPLSAQLLP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4020 19.898 94.0 808790.0 25 0 71305.0 + 3079 AVMRRDQSL 9 92 359.1942278765596 1074.5608542298787 3 359.1939880251884 MULTI CID FTMS 0 0 0 4019 398921.15625 0.7980242121438555 1 -0.0349960327148437 1 Unmodified _AVMRRDQSL_ ENSG00000101182|ENST00000370873|PSMA7;ENST00000484488.5_1_20:60711915-60714832:-|nuORF;nc|ENSG00000101182|O14818-2|PSMA7 31.26834338654808 0.1333407332142048 2 {[VA]|[{I|L}G]}{I|L}M{[QD]|[EN]|[WG]|[KD]|[RS]}AQS{I|L} 10 3 + 48.79 0.0 0.0 4.5405 4.5405 74.792 0.0 0.0 0.0 2.350227980532793 8.093859345357188 2.350227980532793 3.521825181113627 0 1.5172203223519531 2.0 0.3494850021680094 0.0 {[VA]|[{I|L}G]}{I|L}M{[QD]|[EN]|[WG]|[KD]|[RS]}AQS{I|L};{[VA]|[{I|L}G]}{I|L}C(Carbamidomethyl (C)){[RE]|[WV]}QS{I|L};{[VA]|[{I|L}G]}{I|L}M[WQ]QS{I|L};{I|L}{I|L}GC(Carbamidomethyl (C)){[RE]|[WV]}QS{I|L};A{M(Oxidation (M))|F}QA{[QD]|[EN]|[WG]|[KD]|[RS]}[WP]{I|L};{[ET]|[MV]}{[NV]|[RG]}[{I|L}T]AQS{I|L};{[ET]|[MV]}[{I|L}A]{[QD]|[EN]|[WG]|[KD]|[RS]}AQS{I|L};{[ET]|[MV]}{[NV]|[RG]}{[RE]|[WV]}QS{I|L};{[ET]|[MV]}[{I|L}A][WQ]QS{I|L} 4.5405;4.2128;3.9326;3.5373;3.0128;2.1979;1.9178;1.5901;1.3099 -;-;-;-;-;-;-;-;- 198 1 2.131 64123.8 1.0 946 3072 4019 DOHH2_400M_050219_2,4020 DOHH2_400M_050219_2,4020,AVMRRDQSL False True AVMRRDQSL 19.897854 359.193988025188 1766523.125 4019.0 ENSG00000101182|ENST00000370873|PSMA7;;ENST00000484488.5_1_20:60711915-60714832:-|nuORF;;nc|ENSG00000101182|O14818-2|PSMA7 3.699661095937093 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4021 19.901 177.0 387320.0 25 0 77510.0 + 45452 YTEDSPGLK 9 83 505.2452001225658 1008.4758473119316 2 505.2454406619072 MULTI CID FTMS 0 0 0 4019 141896.46875 0.6780199407748103 1 -0.0349960327148437 2 Unmodified _YTEDSPGLK_ ENSG00000106803|ENST00000223641|SEC61B 32.78568957990786 0.1150597335874693 2 YTEDS 5 4 62.25 0.0 0.0 6.1727 0.0 0.0 0.0 410.241175040784 410.241175040784 50.83011152399232 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8494850021680094 0.0 + YTEDS 6.1727 + + 72 + 1 2.131 60714.8 1.0 947 3072 4019 DOHH2_400M_050219_2,4021 DOHH2_400M_050219_2,4021,YTEDSPGLK True True YTEDSPGLK 19.901281 505.245440661907 691975.8125 4019.0 ENSG00000106803|ENST00000223641|SEC61B 6.080931981404622 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4022 19.906 254.0 303430.0 25 0 84516.0 + 3080 AVMRRDQSL 9 77 538.2869477215733 1074.5593425099464 2 538.2872802615166 MULTI CID FTMS 0 0 0 4019 247594.578125 1.0 0 0.0 3 Unmodified _AVMRRDQSL_ ENSG00000101182|ENST00000370873|PSMA7;ENST00000484488.5_1_20:60711915-60714832:-|nuORF;nc|ENSG00000101182|O14818-2|PSMA7 16.942295170755138 0.3780752226737986 2 {[VA]|[{I|L}G]}E 3 7 17.447 0.0 0.0 1.6237 0.0 0.0 0.0 772.3871372699651 772.3871372699651 -2.016675202793717 0.0 -2.016675202793717 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}E 1.6237 - 34 1 2.131 65651.2 1.0 948 3072 4019 DOHH2_400M_050219_2,4022 DOHH2_400M_050219_2,4022,AVMRRDQSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4023 19.91 237.0 249830.0 25 0 19381.0 + 13337 HLDQTTDTY 9 81 547.243860910695 0 547.2439453005791 PEAK CID FTMS 0 0 0 4019 146740.0 1.0 0 0.0 4 Unmodified _HLDQTTDTY_ ENSG00000135476|ENST00000257934|ESPL1;ENST00000535123.6_1_12:53673494-53681766:+|nuORF;nc|ENSG00000135476|Q14674-2|ESPL1 47.74868867922204 0.0378261468855112 2 DTTQD 5 6 20.182 0.0 0.0 1.8474 0.0 0.0 282.12316995037594 247.1202791803344 529.2434491307104 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.6549471895720985 0.0 DTTQD 1.8474 - 67 + 1 2.131 52745.7 1.0 949 3072 4019 DOHH2_400M_050219_2,4023 DOHH2_400M_050219_2,4023,HLDQTTDTY True True HLDQTTDTY 19.910468 547.243945300579 697103.0 4019.0 ENST00000535123.6_1_12:53673494-53681766:+|nuORF;;nc|ENSG00000135476|Q14674-2|ESPL1;;ENSG00000135476|ENST00000257934|ESPL1 8.154722054799398 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4024 19.924 800.0 132980.0 25 0 6254.4 + 2655 ATDISRQNEY 10 117 598.780276434515 1195.54599993583 2 598.7789794802666 MULTI CID FTMS 0 0 0 4019 100898.296875 0.4207133001162102 -3 0.1104888916015625 5 Unmodified _ATDISRQNEY_ ENSG00000205268|ENST00000401827|PDE7A;nc|ENSG00000205268|Q13946-2|PDE7A;nc|ENSG00000205268|Q13946-3|PDE7A 100.7086487251713 0.0085662259466921 2 [TA]D{I|L}W{NN|[MP]|[D{I|L}]|[EV]}AEY 10 4 + 68.153 0.0 0.0 5.7006 5.7006 76.108 0.0 0.0 0.0 3.80810145492795 48.41174292882627 3.80810145492795 0.9691001300805624 0 1.8252574989159955 2.0 0.805462187404089 0.3252574989159953 [TA]D{I|L}W{NN|[MP]|[D{I|L}]|[EV]}AEY;[TA]D{I|L}W[KG]NEY;[TA]D{I|L}W[KG]GGEY;[TA]D{I|L}WQQ[TA]Y;[TA]D{I|L}[QA]Q{[WT]|[RM]}Y;[TA]DHR{M(Oxidation (M))|F}{[WT]|[RM]}Y;[TA]D{I|L}WQQY[TA];[TA]{[TV]|[{I|L}S]}G[DV]QHD[PG];[TA]{[TV]|[{I|L}S]}G{[{M(Oxidation (M))|F}H]|[RQ]}TAEY;{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Y{M(Oxidation (M))|F}]{I|L}D[PG] 5.7006;5.6196;4.853;4.7238;4.5809;4.4186;4.2662;4.1311;4.1168;4.0902 -;-;-;-;-;-;-;-;-;- 3259 1 2.131 82420.2 0.5600000023841858 950 3072 4019 DOHH2_400M_050219_2,4024 DOHH2_400M_050219_2,4024,ATDISRQNEY True True ATDISRQNEY 19.9243 598.778979480267 1073865.625 4019.0 nc|ENSG00000205268|Q13946-2|PDE7A;;ENSG00000205268|ENST00000401827|PDE7A;;nc|ENSG00000205268|Q13946-3|PDE7A 7.587017854054769 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4025 19.928 200.0 271860.0 25 0 37309.0 28623 PVGETLSTY 9 95 483.7434371994996 0 483.7433044314384 PEAK CID FTMS 0 0 0 4019 145579.09375 0.6717934711367229 -1 0.0185317993164062 6 Unmodified _PVGETLSTY_ ENSG00000132122|ENST00000371847|SPATA6;ENST00000463938.5_1_1:48864995-48878812:-|nuORF;nc|ENSG00000132122|Q9NWH7-2|SPATA6 12.531546534597751 0.2832320739326029 2 {I|L} 1 8 8.9794 0.0 0.0 0.93005 0.0 0.0 369.1464070144305 480.2063082330688 849.3527152474993 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + {I|L} 0.93005 + + 32 + 1 2.131 47164.7 1.0 951 3072 4019 DOHH2_400M_050219_2,4025 DOHH2_400M_050219_2,4025,PVGETLSTY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4027 19.939 498.0 175530.0 25 0 15985.0 + 26875 PDEAGDVPTSL 11 113 550.7564896545633 1099.4984263759266 2 550.7572509646416 MULTI CID FTMS 0 0 0 4026 168777.40625 0.7389576942900297 -3 0.1046085357666015 1 Unmodified _PDEAGDVPTSL_ REV__ENSG00000215018|ENST00000399429|COL28A1 16.149105407346934 0.6992268271266642 2 S[WY]PTS{I|L} 7 -1 32.668 0.0 0.0 2.9712 0.0 0.0 247.0784314246069 0.0 247.0784314246069 0.0 22.8179560629342 0.0 0.0 0 0.3807196863200844 0.0 0.7134679910804405 0.0 S[WY]PTS{I|L} 2.9712 - 391 + 1 2.131 71989.4 1.0 952 3073 4026 DOHH2_400M_050219_2,4027 DOHH2_400M_050219_2,4027,PDEAGDVPTSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4028 19.95 584.0 195510.0 25 0 16850.0 17719 KPVGFTVHAI 10 110 534.8116373374436 1067.608721741687 2 534.8117553591728 MULTI CID FTMS 0 0 0 4026 117143.5078125 0.2849268728492769 -9 0.292398452758789 2 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 30.63653989081413 0.2803493085145199 2 KPTQP[WK]A{I|L} 9 6 + 57.647 0.0 0.0 5.3996 5.3996 84.964 0.0 0.0 0.0 36.43561866002288 4.643871731781751 4.643871731781751 9.208187539523747 0 1.6307196863200843 0.0 0.7059771852360797 0.0 KPTQP[WK]A{I|L};KPT[AG]P[WK]A{I|L};KPT[KP][WQ]A{I|L};KPT[KP][WK]SP;{I|L}{[NV]|[RG]}QP[WK]A{I|L};[KP][YK]P[NP]PK;[KP][YK][YT]R{I|L};[K{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YE]K{I|L};[K{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[NP]PK 5.3996;4.5371;3.7377;2.6544;2.1159;1.8836;1.4661;0.42799;0.39862 -;-;-;-;-;-;-;-;- 239 + 1 2.131 90866.1 1.0 953 3073 4026 DOHH2_400M_050219_2,4028 DOHH2_400M_050219_2,4028,KPVGFTVHAI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4029 19.963 800.0 140720.0 25 0 20721.0 -1 0 39 690.9262254896927 3449.5947451154634 5 691.1249877810478 MULTI CID FTMS 0 0 0 4026 68814.515625 0.8844570267691032 1 -0.0353813171386718 3 2 W 1 -1 3.9794 0.0 0.0 0.11536 0.0 0.0 2577.198090918001 683.2944195394111 3260.492510457412 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.11536 - 3 + 1 2.131 89194.4 0.4600000083446502 954 3073 4026 DOHH2_400M_050219_2,4029 DOHH2_400M_050219_2,4029, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4032 19.976 336.0 167880.0 25 0 13089.0 + 25170 MSEDKPQDY 9 102 564.7290360977272 1127.4435192622543 2 564.7291747927666 MULTI CID FTMS 0 0 0 4031 167638.40625 1.0 0 0.0 1 Oxidation (M) _M(Oxidation (M))SEDKPQDY_ ENSG00000168036|ENST00000349496|CTNNB1;ENST00000465552.1_1_3:41277978-41278230:+|nuORF;ENST00000485265.1_1_3:41277322-41278230:+|nuORF 70.33199760932243 0.0209706178985989 2 {M(Oxidation (M))|F}SEDK[QP]DY 9 0 + 77.828 0.0 0.0 6.903 6.903 87.183 0.0 0.0 0.0 59.86880000633434 14.973024840566469 14.973024840566469 6.817496819840656 0 1.305462187404089 0.0 0.9361818737241734 0.3807196863200844 + + {M(Oxidation (M))|F}SEDK[QP]DY;{M(Oxidation (M))|F}SEDKG[PA]DY;{[YD]|[{M(Oxidation (M))|F}M]}WGKDESE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WT]|[RM]}KDESE;{M(Oxidation (M))|F}SWW[QP]DY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[YD]|[{M(Oxidation (M))|F}M]}KDESE;{M(Oxidation (M))|F}SWWG[PA]DY;AAT{[YD]|[{M(Oxidation (M))|F}M]}KDESE;{[{M(Oxidation (M))|F}C]|[YS]}[DV]GKDESE;{M(Oxidation (M))|F}SE[WP]{[WN]|[YH]}Y 6.903;6.2983;5.7318;4.6828;4.5946;4.5403;3.9852;3.895;3.8314;3.2669 +;-;-;-;-;-;-;-;-;- + 460 + 1 2.136 47484.8 1.0 955 3075 4031 DOHH2_400M_050219_2,4032 DOHH2_400M_050219_2,4032,MSEDKPQDY True False MSEDKPQDY 19.976091 564.729174792767 954019.0 4031.0 ENSG00000168036|ENST00000349496|CTNNB1;;ENST00000485265.1_1_3:41277322-41278230:+|nuORF;;ENST00000465552.1_1_3:41277978-41278230:+|nuORF 9.398746331532797 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4033 19.99 800.0 140540.0 25 0 11884.0 + 38473 TSDLQDKNEY 10 134 606.7726018112373 1211.5306506892746 2 606.7720825076103 MULTI CID FTMS 0 0 0 4031 119605.7265625 0.0774344755882266 -10 0.3278446197509765 2 Unmodified _TSDLQDKNEY_ ENSG00000075188|ENST00000552283|NUP37;ENST00000551200.5_1_12:102471044-102512308:-|nuORF 128.5786326129116 0.0002163543161949 2 {[MG]|[TS]}D{I|L}QDK[YE]N 10 2 + 71.479 0.0 0.0 5.8999 5.8999 76.737 0.0 0.0 0.0 10.161357760985736 0.0989161136466663 0.0989161136466663 0.8830984124613792 0 2.0669015600442577 0.7958800173440752 0.6421590589602533 1.110924374808178 {[MG]|[TS]}D{I|L}QDK[YE]N;{[MG]|[TS]}D{I|L}Q[QA]{[WT]|[RM]}Y;{[MG]|[TS]}D{I|L}QDT[YQ]AA;{[MG]|[TS]}D{I|L}[TP]E{[WT]|[RM]}Y;{[MG]|[TS]}D{I|L}[AG]DK[YE]N;{[MG]|[TS]}D{I|L}[AG]DT[YQ]AA;{[MG]|[TS]}D{[RE]|[WV]}AKNEY;{[MG]|[TS]}D[PA]{[MG]|[TS]}KNEY;{[MG]|[TS]}D{[RE]|[WV]}AKGGEY;{[QD]|[EN]|[WG]|[KD]|[RS]}KDQV{[MG]|[TS]}EY 5.8999;5.827;5.8263;5.1847;5.1434;5.0728;4.9214;4.614;4.1649;4.0198 -;-;-;-;-;-;-;-;-;- 5217 + 1 2.136 88533.9 0.6800000071525574 956 3075 4031 DOHH2_400M_050219_2,4033 DOHH2_400M_050219_2,4033,TSDLQDKNEY True True TSDLQDKNEY 19.989924 606.77208250761 14703609.0 4031.0 ENST00000551200.5_1_12:102471044-102512308:-|nuORF;;ENSG00000075188|ENST00000552283|NUP37 7.640756924947103 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4034 19.999 524.0 171450.0 25 0 12249.0 + 16758 KFPLNEPI 8 109 479.2720968059838 956.5296406787676 2 479.2718383669853 MULTI CID FTMS 0 0 0 4031 86268.4921875 1.0 0 0.0 3 Unmodified _KFPLNEPI_ REV__ENSG00000253537|ENST00000518325|PCDHGA7;REV__nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7 16.942295170755138 0.6606234159769251 2 PE{I|L} 3 -1 32.293 0.0 0.0 3.376 0.0 0.0 599.3407651228493 0.0 599.3407651228493 0.0 27.68865673898112 0.0 0.0 0 0.5297966019298022 0.0 0.3807196863200844 0.0 PE{I|L} 3.376 - 68 1 2.136 72462.5 1.0 957 3075 4031 DOHH2_400M_050219_2,4034 DOHH2_400M_050219_2,4034,KFPLNEPI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4037 20.01 223.0 336710.0 25 0 38234.0 + 41201 VPENKAKE 8 106 457.7516378449352 913.4887227566704 2 457.7505370974541 MULTI CID FTMS 0 0 0 4036 186515.46875 0.5362038282389061 -7 0.1796855926513672 1 Unmodified _VPENKAKE_ REV__ENSG00000160633|ENST00000588852|SAFB;REV__nc|ENSG00000160633|Q15424-2|SAFB;REV__nc|ENSG00000160633|Q15424-4|SAFB;REV__nc|ENSG00000160633|Q15424|SAFB 46.020951573049366 0.1579632664462935 2 VPN{M(Oxidation (M))|F} 4 -1 49.918 0.0 0.0 5.4645 0.0 0.0 0.0 453.24472986392817 453.24472986392817 34.433159911496354 0.0 0.0 0.0 0 0.8274509799928715 1.0457574905606752 0.0 0.4247425010840047 VPN{M(Oxidation (M))|F} 5.4645 - 184 + 1 2.136 62353.5 1.0 958 3077 4036 DOHH2_400M_050219_2,4037 DOHH2_400M_050219_2,4037,VPENKAKE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4038 20.015 293.0 242480.0 25 0 57239.0 + 391 AEDMTSKDY 9 82 530.217739627835 1058.42092632247 2 530.2174560427666 MULTI CID FTMS 0 0 0 4036 169103.65625 1.0 0 0.0 2 Unmodified _AEDMTSKDY_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 23.78978130925829 0.2284941198415988 2 {[CP]|[EA]}DMTS 6 3 30.138 0.0 0.0 2.8475 0.0 0.0 0.0 421.17246423892817 421.17246423892817 7.914478256039672 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {[CP]|[EA]}DMTS 2.8475 + + 246 + 1 2.136 59935.2 1.0 959 3077 4036 DOHH2_400M_050219_2,4038 DOHH2_400M_050219_2,4038,AEDMTSKDY False True AEDMTSKDY 20.015255 530.217456042767 665372.4375 4036.0 ENSG00000126457|ENST00000454376|PRMT1;;nc|ENSG00000126457|Q99873-5|PRMT1;;nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENST00000525616.1_1_19:50180537-50188241:+|nuORF 7.134522914886475 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4039 20.017 51.0 1332500.0 25 0 106140.0 + 35226 SSDPYHSGY 9 87 506.703922326974 1011.393291720748 2 506.7041503787041 MULTI CID FTMS 0 0 0 4036 1195622.0 0.1910528325825694 -10 0.2839889526367187 3 Unmodified _SSDPYHSGY_ ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT 67.34385681178166 0.0221257235307089 2 {[CA]|SS}DPY[HS]GY 9 0 + 40.626 0.0 0.0 4.0169 4.0169 83.252 0.0 0.0 0.0 16.52249673628745 9.832881222565248 9.832881222565248 19.43820026016112 0 0.805462187404089 0.0 0.75 0.0 + + {[CA]|SS}DPY[HS]GY;{[CA]|SS}DP[MN][QA]Y;{[CA]|SS}DP[MN]AAGY;{[WN]|[YH]}PSGY{[C(Carbamidomethyl (C))E]|[WC]};{[CA]|SS}M{[HG]|PP}D[HN]Q;{[CA]|SS}D[HT][{M(Oxidation (M))|F}V]GY;{[CA]|SS}D[H{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GY;{[CA]|SS}M{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HS]GY;{[CA]|SS}D[H{I|L}]A[MD]H;{[CA]|SS}[HT]D[{M(Oxidation (M))|F}V]GY 4.0169;2.095;1.9714;1.9621;1.8421;1.8413;1.3696;1.1924;0.74829;0.74732 +;-;-;-;-;-;-;-;-;- + 509 + 1 2.136 58161.2 1.0 960 3077 4036 DOHH2_400M_050219_2,4039 DOHH2_400M_050219_2,4039,SSDPYHSGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4040 20.024 413.0 238630.0 25 0 59561.0 + 30556 RENLPGRNY 9 79 559.7883984210714 1117.5622439089427 2 559.7886230349541 MULTI CID FTMS 0 0 0 4036 207116.375 0.8595442565708981 4 -0.0927257537841796 4 Unmodified _RENLPGRNY_ ENSG00000173757|ENST00000293328|STAT5B;ENST00000468496.5_1_17:40362419-40369297:-|nuORF 29.081581746732265 0.1611639662936252 2 Y 1 8 14.604 0.0 0.0 1.3068 0.0 0.0 936.4882215474178 0.0 936.4882215474178 0.0 -3.182503180159344 -3.182503180159344 0.0 0 0.0 0.0 0.0 0.0 + Y 1.3068 + + 29 + 1 2.136 81100.0 1.0 961 3077 4036 DOHH2_400M_050219_2,4040 DOHH2_400M_050219_2,4040,RENLPGRNY False True RENLPGRNY 20.023995 559.788623034954 1849980.0 4036.0 ENSG00000173757|ENST00000293328|STAT5B;;ENST00000468496.5_1_17:40362419-40369297:-|nuORF 7.0660271644592285 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4041 20.038 800.0 262810.0 25 0 38327.0 + 29757 QPQGSFAAPAI 11 152 543.7803756793202 1085.5461984254405 2 543.7805663943291 MULTI CID FTMS 0 0 0 4036 124233.59375 0.0571792276217894 -12 0.3635215759277344 5 Unmodified _QPQGSFAAPAI_ REV__ENSG00000175727|ENST00000319080|MLXIP;REV__ENST00000541750.1_12:122618368-122620257:+|nuORF;REV__nc|ENSG00000175727|Q9HAP2-2|MLXIP;REV__nc|ENSG00000175727|Q9HAP2-4|MLXIP 49.55428908609986 0.1200983873401432 2 QPQDT[WK]A{I|L} 9 -1 + 71.724 0.0 0.0 6.6072 6.6072 88.508 0.0 0.0 0.0 43.78181747512826 16.478174818886373 16.478174818886373 9.164539485499256 0 0.9095680409956016 0.6020599913279624 0.9802046884880936 0.3494850021680094 QPQDT[WK]A{I|L};[AG]P[AG]DT[WK]A{I|L};[AG]TWPEA{[QN]|[E{I|L}]|[KN]}{I|L};QPQ[{M(Oxidation (M))|F}V][KQ][DP];{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}H]|[RQ]}EA{[QN]|[E{I|L}]|[KN]}{I|L};[QT]WPEA{[QN]|[E{I|L}]|[KN]}{I|L};[{I|L}A]{[QC]|[C(Carbamidomethyl (C))A]}PEA{[QN]|[E{I|L}]|[KN]}{I|L};[TA]GWPEA{[QN]|[E{I|L}]|[KN]}{I|L};QP{M(Oxidation (M))|F}N{I|L}[KQ][DP];[AG]TWP{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HA]{I|L} 6.6072;5.763;2.6984;2.01;1.6661;1.5975;1.3034;1.2699;1.2238;0.69493 -;-;-;-;-;-;-;-;-;- 2090 + 1 2.136 162449.0 0.6700000166893005 962 3077 4036 DOHH2_400M_050219_2,4041 DOHH2_400M_050219_2,4041,QPQGSFAAPAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4043 20.043 53.0 780950.0 25 0 114810.0 + 25174 MSEDKPQDY 9 66 556.7317095785213 1111.4488662238423 2 556.7317993044853 MULTI CID FTMS 0 0 0 4042 1077314.625 0.5500224609877946 5 -0.0799541473388671 1 Unmodified _MSEDKPQDY_ ENSG00000168036|ENST00000349496|CTNNB1;ENST00000465552.1_1_3:41277978-41278230:+|nuORF;ENST00000485265.1_1_3:41277322-41278230:+|nuORF 55.50274090549119 0.0285720310785888 2 MSEDK[QP]DY 9 0 + 87.63 0.0 0.0 7.8843 7.8843 94.649 0.0 0.0 0.0 71.43175948177209 12.587418566968154 12.587418566968154 13.96713777483761 0 0.805462187404089 2.0 0.8494850021680094 0.4247425010840047 + + MSEDK[QP]DY;MSEDK{[YD]|[{M(Oxidation (M))|F}M]}[QP];MSEDK[R{M(Oxidation (M))|F}]{[CP]|[EA]};MSWW[QP]DY;MSWW{[YD]|[{M(Oxidation (M))|F}M]}[QP];{[{M(Oxidation (M))|F}C]|[YS]}[RD]KDE{[CP]|[EA]};{[MG]|[TS]}[W{M(Oxidation (M))|F}]KDE{[CP]|[EA]};{[QD]|[EN]|[WG]|[KD]|[RS]}RRC(Carbamidomethyl (C))C(Carbamidomethyl (C))SM;{[{M(Oxidation (M))|F}C]|[YS]}[RD]WW{[CP]|[EA]};{[MG]|[TS]}[W{M(Oxidation (M))|F}]WW{[CP]|[EA]} 7.8843;6.6276;6.5599;5.8852;4.6286;2.6987;2.1772;0.90972;0.69967;0.17815 +;-;-;-;-;-;-;-;-;- + 125 + 1 2.136 38776.5 1.0 963 3078 4042 DOHH2_400M_050219_2,4043 DOHH2_400M_050219_2,4043,MSEDKPQDY True True MSEDKPQDY 20.042611 556.731799304485 19276240.0 4042.0 ENSG00000168036|ENST00000349496|CTNNB1;;ENST00000485265.1_1_3:41277322-41278230:+|nuORF;;ENST00000465552.1_1_3:41277978-41278230:+|nuORF 9.460165659586588 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4044 20.046 167.0 247330.0 25 0 21363.0 + 6338 DVKSKTEAL 9 71 495.7763630321344 989.5381731310688 2 495.7760497927666 MULTI CID FTMS 0 0 0 4042 241355.296875 0.3063176024050512 6 -0.0836772918701171 2 Unmodified _DVKSKTEAL_ ENSG00000129083|ENST00000439561|COPB1 21.53697664764585 0.2571576504437394 2 DVK 3 6 50.005 0.0 0.0 5.0534 0.0 0.0 0.0 644.3275798145108 644.3275798145108 36.025684359364405 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + DVK 5.0534 + + 66 + 1 2.136 38217.0 1.0 964 3078 4042 DOHH2_400M_050219_2,4044 DOHH2_400M_050219_2,4044,DVKSKTEAL False True DVKSKTEAL 20.045872 495.776049792767 3466111.75 4042.0 ENSG00000129083|ENST00000439561|COPB1 3.534426291783651 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4045 20.048 100.0 942020.0 25 0 174380.0 + 7566 EIKKRFRQL 9 66 406.5873334981831 1216.7401710947493 3 406.5872680544853 MULTI CID FTMS 0 0 0 4042 310581.8125 0.1723804928339408 -9 0.2552471160888672 3 Unmodified _EIKKRFRQL_ ENSG00000126698|ENST00000263697|DNAJC8;ENST00000482674.5_1_1:28537058-28559509:-|nuORF;ENST00000488868.1_1_1:28537058-28556683:-|nuORF;ENST00000489277.5_1_1:28527761-28556683:-|nuORF 27.628801355627647 0.1796483985696185 2 E{I|L}KKR 5 4 47.92 0.0 0.0 3.9384 0.0 0.0 0.0 559.2990206354124 559.2990206354124 22.703037561203843 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.4247425010840047 + E{I|L}KKR 3.9384 + + 30 + 1 2.136 80394.3 1.0 965 3078 4042 DOHH2_400M_050219_2,4045 DOHH2_400M_050219_2,4045,EIKKRFRQL False True EIKKRFRQL 20.048015 406.587268054485 18936746.0 4042.0 ENSG00000126698|ENST00000263697|DNAJC8;;ENST00000488868.1_1_1:28537058-28556683:-|nuORF;;ENST00000489277.5_1_1:28527761-28556683:-|nuORF;;ENST00000482674.5_1_1:28537058-28559509:-|nuORF 2.854313651720682 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4046 20.05 114.0 677910.0 25 0 354930.0 -1 0 66 472.2728565094546 471.2655800428546 1 472.2725097537041 MULTI CID FTMS 0 0 0 4042 523853.6875 0.9244501988718644 3 -0.0580406188964843 4 2 Y 1 -1 1.1092 0.0 0.0 0.23538 0.0 0.0 239.1436145660952 66.0356691949828 305.179283761078 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.23538 - 3 + 1 2.136 65947.1 1.0 966 3078 4042 DOHH2_400M_050219_2,4046 DOHH2_400M_050219_2,4046, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4047 20.06 525.0 219840.0 25 0 45080.0 + 14261 IEEYTLLTI 9 114 547.80139732125 1093.5882417092998 2 547.8014404177666 MULTI CID FTMS 0 0 0 4042 104934.7265625 0.6826708729899762 -1 0.0346851348876953 5 Unmodified _IEEYTLLTI_ REV__ENSG00000162779|ENST00000367618|AXDND1;REV__nc|ENSG00000162779|Q5T1B0-3|AXDND1 16.149105407346934 0.3995459350917656 2 EE 2 -1 26.819 0.0 0.0 2.4524 0.0 0.0 0.0 832.4799392204048 832.4799392204048 8.235872793890131 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 EE 2.4524 + + 112 + 1 2.136 90424.3 1.0 967 3078 4042 DOHH2_400M_050219_2,4047 DOHH2_400M_050219_2,4047,IEEYTLLTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4050 20.068 83.0 862110.0 25 0 107460.0 16058 ITLLTYEEI 9 86 365.5365408347641 1093.5877931044922 3 365.5366699099541 MULTI CID FTMS 0 0 0 4049 696484.875 1.0 0 0.0 1 Unmodified _ITLLTYEEI_ ENSG00000162779|ENST00000367618|AXDND1;nc|ENSG00000162779|Q5T1B0-3|AXDND1 11.494710602746466 0.5255349189887087 2 {I|L}{M(Oxidation (M))|F} 2 8 31.682 0.0 0.0 2.8971 0.0 0.0 0.0 830.4288406150334 830.4288406150334 15.228787452803374 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{M(Oxidation (M))|F} 2.8971 - 36 + 1 2.136 59007.4 1.0 968 3080 4049 DOHH2_400M_050219_2,4050 DOHH2_400M_050219_2,4050,ITLLTYEEI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4051 20.082 800.0 139510.0 25 0 21775.0 + 24680 MMDPNSTQRY 10 93 629.762910775625 1257.5112686180498 2 629.7630493044853 MULTI CID FTMS 0 0 0 4049 127251.28125 0.4787028740457485 -7 0.1353988647460937 2 Oxidation (M) _M(Oxidation (M))MDPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 74.19965305603844 0.0188013450058842 2 {M(Oxidation (M))|F}MDPNSTQRY 10 0 + 89.479 0.0 0.0 7.1156 7.1156 89.728 0.0 0.0 0.0 68.76586597217134 11.082268588648247 11.082268588648247 9.164539485499247 0 1.0 0.0 0.7614393726401688 1.2302046884880935 + + {M(Oxidation (M))|F}MDPNSTQRY;{M(Oxidation (M))|F}MDPGGSTQRY;{M(Oxidation (M))|F}MDPNST[AG]RY;{M(Oxidation (M))|F}MDPNST[YR]Q;{M(Oxidation (M))|F}MDPNST{[QV]|[N{I|L}]|[RA]|[KV]}GY;{M(Oxidation (M))|F}MDPGGST[AG]RY;{M(Oxidation (M))|F}MDPGGST[YR]Q;{M(Oxidation (M))|F}MDPGGST{[QV]|[N{I|L}]|[RA]|[KV]}GY;{M(Oxidation (M))|F}MDPN[C(Carbamidomethyl (C))R]RY;{M(Oxidation (M))|F}MYYSTQRY 7.1156;6.3868;6.3868;5.9507;5.9381;5.6609;5.2219;5.2122;5.0417;4.6994 +;-;-;-;-;-;-;-;-;- + 612 + 1 2.136 84620.1 0.6899999976158142 969 3080 4049 DOHH2_400M_050219_2,4051 DOHH2_400M_050219_2,4051,MMDPNSTQRY True False MMDPNSTQRY 20.082086 629.763049304485 3805295.75 4049.0 ENSG00000124571|ENST00000265351|XPO5 7.596555074055989 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4052 20.096 800.0 189920.0 25 0 56811.0 + -1 LTGWPLTMK 9 141 531.7848194303747 1061.5550859275493 2 532.2946044802666 MULTI CID FTMS 0 0 0 4049 101905.9609375 0.0917341978745736 -23 0.5341987609863281 3 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 27.628801355627647 0.1796483985696185 2 KTTHRVEK 8 -1 47.727 0.0 0.0 4.496 0.0 0.0 63.99983861014875 0.0 63.99983861014875 0.0 33.12315166778571 0.0 0.0 0 1.242992819099939 0.0 0.8494850021680094 0.6861818737241735 KTTHRVEK 4.496 - 523 + 1 2.136 119899.8 0.6600000262260437 970 3080 4049 DOHH2_400M_050219_2,4052 DOHH2_400M_050219_2,4052,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4055 20.116 800.0 227160.0 25 0 57539.0 7568 EIKKRFRQL 9 118 609.3773352555038 1216.7401175778075 2 609.3770019412041 MULTI CID FTMS 0 0 0 4054 149581.953125 0.5820617335668898 -6 0.1005897521972656 1 Unmodified _EIKKRFRQL_ ENSG00000126698|ENST00000263697|DNAJC8;ENST00000482674.5_1_1:28537058-28559509:-|nuORF;ENST00000488868.1_1_1:28537058-28556683:-|nuORF;ENST00000489277.5_1_1:28527761-28556683:-|nuORF 22.736283301280096 0.2418982879461534 2 {I|L}E 2 8 39.257 0.0 0.0 3.2264 0.0 0.0 0.0 971.5891013395956 971.5891013395956 21.35249585179414 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 0.3807196863200844 0.0 {I|L}E 3.2264 - 99 + 1 2.136 138458.7 0.699999988079071 971 3082 4054 DOHH2_400M_050219_2,4055 DOHH2_400M_050219_2,4055,EIKKRFRQL False True ASAPVSGAGNHSY 20.116134 609.377001941204 0.0 4054.0 nc|ENSG00000100100|Q96FE7-2|PIK3IP1;;nc|ENSG00000100100|Q96FE7-4|PIK3IP1;;ENSG00000100100|ENST00000215912|PIK3IP1 3.6755146185557046 2.0 False 13.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4056 20.118 68.0 915250.0 25 0 86772.0 + 16637 KEIGTKQSF 9 94 519.2851591243501 1036.5557653155 2 519.2850219607353 MULTI CID FTMS 0 0 0 4054 717208.8125 0.6325452412127883 -3 0.0401515960693359 2 Unmodified _KEIGTKQSF_ ENSG00000102699|ENST00000381989|PARP4 57.24910588100465 0.0276051374632116 2 KE{I|L}{[SA]|[TG]}KQS{M(Oxidation (M))|F} 9 0 + 59.139 0.0 0.0 5.7053 5.7053 91.105 0.0 0.0 0.0 40.55516236474446 3.872724716820244 3.872724716820244 33.38431547352918 0 1.6791746928241125 1.2218487496163564 0.3807196863200844 0.0 + + KE{I|L}{[SA]|[TG]}KQS{M(Oxidation (M))|F};K{M(Oxidation (M))|F}[RP]KQS{M(Oxidation (M))|F} 5.7053;2.4846 +;- + 95 + 1 2.136 54676.0 1.0 972 3082 4054 DOHH2_400M_050219_2,4056 DOHH2_400M_050219_2,4056,KEIGTKQSF True True KEIGTKQSF 20.117765 519.285021960735 5378338.5 4054.0 ENSG00000102699|ENST00000381989|PARP4 5.280577977498372 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4059 20.134 558.0 282300.0 25 0 40333.0 + 4770 DEKRDFRTY 9 120 410.5349488073888 1228.5830170223664 3 410.5350219607353 MULTI CID FTMS 0 0 0 4058 107139.328125 0.1086939574178302 -8 0.1223354339599609 1 Unmodified _DEKRDFRTY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF 51.41523569358685 0.0372669606867193 2 DEKRDY 6 3 73.074 0.0 0.0 5.9479 0.0 0.0 0.0 419.2052401178344 419.2052401178344 56.62081306997561 0.0 0.0 0.0 0 1.066901560044258 1.6989700043360187 0.5 0.3494850021680094 DEKRDY 5.9479 - 396 + 1 2.136 128090.3 1.0 973 3084 4058 DOHH2_400M_050219_2,4059 DOHH2_400M_050219_2,4059,DEKRDFRTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4060 20.139 276.0 219430.0 25 0 11972.0 + -1 QQIQKVVM 8 103 495.27490927776586 0 495.2747375369072 PEAK CID FTMS 0 0 0 4058 113598.5703125 0.6049398859216658 -1 0.00372314453125 2 Oxidation (M) _QQIQKVVM(Oxidation (M))_ ENST00000550578.1_1_12:53547103-53547616:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENSG00000161960|ENST00000293831|EIF4A1;nc|ENSG00000161960|P60842-2|EIF4A1;ENST00000578324.5_1_17:7477602-7481249:+|nuORF 32.116972079565 0.2111542247894177 2 {I|L}QKVV 5 -1 12.76 0.0 0.0 1.2908 0.0 0.0 256.1146741743091 162.0234774225219 418.138151596831 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {I|L}QKVV 1.2908 + + 156 + 1 2.136 55924.4 1.0 974 3084 4058 DOHH2_400M_050219_2,4060 DOHH2_400M_050219_2,4060,QQIQKVVM False False QQIQKVVM 20.1389 495.274737536907 6915079.5 4058.0 ENST00000550578.1_1_12:53547103-53547616:+|nuORF;;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF 6.419384956359863 2.0 True 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4061 20.153 800.0 77393.0 25 0 10228.0 + -1 MMDPNSTQRY 10 82 637.7599808491484 1273.5054087650967 2 637.7607299685478 MULTI CID FTMS 0 0 0 4058 88141.96875 1.0 0 0.0 3 2 Oxidation (M) _M(Oxidation (M))M(Oxidation (M))DPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 26.020703789607367 0.3840598856887971 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DPNSTQ[YR] 10 -1 + 54.882 0.0 0.0 4.3095 4.3095 74.679 0.0 0.0 0.0 4.884381005764311 4.259687322722812 4.259687322722812 4.259687322722812 0 1.0 0.0 0.0 0.4247425010840047 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DPNSTQ[YR];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DPNSTY{[{M(Oxidation (M))|F}H]|[RQ]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DPGGSTQ[YR];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DPNST[AG][YR];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DPNST{[QV]|[N{I|L}]|[RA]|[KV]}[YG];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DPGGSTY{[{M(Oxidation (M))|F}H]|[RQ]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DPGGST[AG][YR];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DPGGST{[QV]|[N{I|L}]|[RA]|[KV]}[YG];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DPN[C(Carbamidomethyl (C))R][YR];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DPNSAA[VS][YG] 4.3095;3.9751;3.5899;3.5899;3.301;3.2554;2.8731;2.5842;2.5606;2.1114 +;-;-;-;-;-;-;-;-;- + 180 + 1 2.136 51408.0 0.5699999928474426 975 3084 4058 DOHH2_400M_050219_2,4061 DOHH2_400M_050219_2,4061,MMDPNSTQRY False False MMDPNSTQRY 20.15274 637.760729968548 409196.4375 4058.0 ENSG00000124571|ENST00000265351|XPO5 9.59383233388265 2.0 True 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4064 20.162 99.0 695610.0 25 0 398730.0 -1 0 49 488.2678344109858 487.2605579443859 1 488.2675964236259 MULTI CID FTMS 0 0 0 4063 567712.625 0.476082062579457 -42 0.9251155853271484 1 2 M 1 -1 10.969 0.0 0.0 2.2512 0.0 0.0 338.2106139520015 0.0 338.2106139520015 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 M 2.2512 - 3 + 1 2.136 57564.8 1.0 976 3086 4063 DOHH2_400M_050219_2,4064 DOHH2_400M_050219_2,4064, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4067 20.182 800.0 217380.0 25 0 60448.0 + 27518 PKNRLQEI 8 131 499.29343876068185 996.5723245881636 2 499.2938720583916 MULTI CID FTMS 0 0 0 4066 112237.3515625 0.424045530290204 -4 0.0439281463623046 1 Unmodified _PKNRLQEI_ REV__ENSG00000168439|ENST00000305218|STIP1;REV__nc|ENSG00000168439|P31948-2|STIP1;REV__nc|ENSG00000168439|P31948-3|STIP1 34.10243960390752 0.3329570729325616 2 KPT 3 -1 42.435 0.0 0.0 4.2581 0.0 0.0 0.0 667.3539636807345 667.3539636807345 8.57637447025457 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.6989700043360187 0.0 KPT 4.2581 - 230 + 1 2.136 137724.1 0.75 977 3088 4066 DOHH2_400M_050219_2,4067 DOHH2_400M_050219_2,4067,PKNRLQEI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4068 20.188 340.0 257050.0 25 0 21865.0 2576 ASIKIRTD 8 117 452.2669674316792 902.5193819301584 2 452.2685119509697 MULTI CID FTMS 0 0 0 4066 107429.4453125 0.0868993886960848 -9 0.1058254241943359 2 Unmodified _ASIKIRTD_ ENSG00000035403|ENST00000211998|VCL;nc|ENSG00000035403|P18206-2|VCL 13.042465956692816 0.7182358012947757 2 {[SA]|[TG]}{I|L}K[R{M(Oxidation (M))|F}]D 7 2 24.63 0.0 0.0 2.7291 0.0 0.0 0.0 82.06695734195546 82.06695734195546 11.359309616568591 0.0 0.0 0.0 0 0.2742275032520141 1.154901959985743 0.2134679910804404 0.0 {[SA]|[TG]}{I|L}K[R{M(Oxidation (M))|F}]D 2.7291 - 81 + 1 2.136 73993.0 1.0 978 3088 4066 DOHH2_400M_050219_2,4068 DOHH2_400M_050219_2,4068,ASIKIRTD False True SALKRSEL 20.187935 452.26851195097 5028161.5 4066.0 ENSG00000076003|ENST00000264156|MCM6;;chr2:135844681-135846237|13|65.38|0.67|6.61|-|2|None,MCM6|1 0.7915540983279546 2.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4071 20.208 762.0 231520.0 25 0 21578.0 + 17546 KPNRKSEPL 9 135 534.8116373374436 1067.608721741687 2 534.8115112185478 MULTI CID FTMS 0 0 0 4070 209815.703125 0.5103324399484932 8 -0.2101593017578125 1 Unmodified _KPNRKSEPL_ REV__ENST00000548422.1_1_12:96676203-96677401:-|nuORF 30.63653989081413 0.1413794767160703 2 KPTGAPWKA{I|L} 10 -1 + 80.385 0.0 0.0 7.5295 7.5295 88.243 0.0 0.0 0.0 40.18614309909985 13.37205316164642 13.37205316164642 6.53212513775344 0 2.167735320183944 0.0 0.7059771852360797 0.3054621874040891 KPTGAPWKA{I|L};KPTQPWKA{I|L};[TP]QKPWAK{I|L};KPT[KP][WQ]A{I|L};[KP]TQPWAK{I|L};[TP]QKPWA{I|L}K;{I|L}{[NV]|[RG]}GAPWKA{I|L};[TP][AG]KPWAK{I|L};[KP]TQPWA{I|L}K;{I|L}{[NV]|[RG]}QPWKA{I|L} 7.5295;6.9176;4.618;4.5119;3.9607;3.8887;3.7947;3.7555;3.2314;3.1828 -;-;-;-;-;-;-;-;-;- 602 + 1 2.136 138977.9 1.0 979 3090 4070 DOHH2_400M_050219_2,4071 DOHH2_400M_050219_2,4071,KPNRKSEPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4072 20.221 800.0 101380.0 25 0 16650.0 + -1 FPCRIDTWSYD 11 68 730.3222405654009 1458.6299281976017 2 730.3229858279228 MULTI CID FTMS 0 0 0 4070 110741.203125 0.1132532160843591 -5 0.0391407012939453 2 Carbamidomethyl (C) _FPC(Carbamidomethyl (C))RIDTWSYD_ REV__ENSG00000122550|ENST00000339077|KLHL7;REV__nc|ENSG00000122550|Q8IXQ5-2|KLHL7;REV__nc|ENSG00000122550|Q8IXQ5-5|KLHL7 5.296884461304476 0.8501568894076437 2 DNQDT{I|L}SSK 9 -1 46.125 0.0 0.0 3.1622 0.0 0.0 452.1749775826365 0.0 452.1749775826365 0.0 38.0263262668646 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 DNQDT{I|L}SSK 3.1622 - 125 + 1 2.136 62740.8 0.6200000047683716 980 3090 4070 DOHH2_400M_050219_2,4072 DOHH2_400M_050219_2,4072,FPCRIDTWSYD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4073 20.235 800.0 156270.0 25 0 35721.0 + 4772 DEKRDFRTY 9 76 615.299532164356 1228.584511395512 2 615.3005248904228 MULTI CID FTMS 0 0 0 4070 81633.6328125 0.4056601700610973 -2 0.0263309478759765 3 Unmodified _DEKRDFRTY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF 32.037481411007896 0.1235546156350648 2 DE[RK]D{M(Oxidation (M))|F}RTY 9 0 + 71.82 0.0 0.0 5.8458 5.8458 90.514 0.0 0.0 0.0 47.044190852930825 14.973024840566469 14.973024840566469 19.897000433601875 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + + DE[RK]D{M(Oxidation (M))|F}RTY;DE[RK]DY[HA][VP];DE[RK]DY[H{I|L}][PG];DE[RK]DGE{[QV]|[N{I|L}]|[RA]|[KV]}[PG];DE[RK]GDE{[QV]|[N{I|L}]|[RA]|[KV]}[PG];DE[RK]DW{[QG]|[NA]}[VP];DE[RK]DW{[QV]|[N{I|L}]|[RA]|[KV]}[PG];DE[RK]DG[WQ][VP];DE[RK]GD[WQ][VP];DE[RK]D{M(Oxidation (M))|F}[HS][VP] 5.8458;4.2263;4.0601;3.9007;3.9007;3.8379;3.6718;3.6355;3.6355;3.4912 +;-;-;-;-;-;-;-;-;- + 365 + 1 2.136 95195.5 0.6600000262260437 981 3090 4070 DOHH2_400M_050219_2,4073 DOHH2_400M_050219_2,4073,DEKRDFRTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4075 20.241 83.0 440760.0 25 0 27328.0 + 38474 TSDLQDKNEY 10 68 606.7726018112373 1211.5306506892746 2 606.7726928591728 MULTI CID FTMS 0 0 0 4074 687134.375 0.4448607229434374 6 -0.1463603973388672 1 Unmodified _TSDLQDKNEY_ ENSG00000075188|ENST00000552283|NUP37;ENST00000551200.5_1_12:102471044-102512308:-|nuORF 57.24910588100465 0.0438022649904578 2 {[MG]|[TS]}D{I|L}Q[HN]{I|L}DS 10 5 48.722 0.0 0.0 4.0215 0.0 0.0 0.0 98.02527033023672 98.02527033023672 23.505018913849653 0.0 0.0 0.0 0 0.0 0.6989700043360187 1.0044321917401078 0.8807196863200843 {[MG]|[TS]}D{I|L}Q[HN]{I|L}DS 4.0215 - 202 + 1 2.13 32106.3 1.0 982 3091 4074 DOHH2_400M_050219_2,4075 DOHH2_400M_050219_2,4075,TSDLQDKNEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4076 20.255 800.0 162690.0 25 0 27499.0 + 8538 ETERTRNLY 9 99 591.2998061803535 1180.5850594275068 2 591.2986938357353 MULTI CID FTMS 0 0 0 4074 94084.328125 0.803969647173257 -2 0.0472335815429687 2 Unmodified _ETERTRNLY_ ENSG00000101343|ENST00000536226|CRNKL1;ENST00000521379.1_1_20:20018163-20019094:-|nuORF;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 21.59015148037692 0.2564810811560323 2 Y 1 8 19.732 0.0 0.0 1.6714 0.0 0.0 999.5106555962552 0.0 999.5106555962552 0.0 9.018637558036673 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + Y 1.6714 + + 47 + 1 2.13 102230.0 0.5099999904632568 983 3091 4074 DOHH2_400M_050219_2,4076 DOHH2_400M_050219_2,4076,ETERTRNLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4077 20.257 126.0 851580.0 25 0 96562.0 + 146 AALKKALAA 9 98 428.7844255853131 855.5542982374262 2 428.7842590212822 MULTI CID FTMS 0 0 0 4074 660966.875 1.0 0 0.0 3 Unmodified _AALKKALAA_ ENSG00000124575|ENST00000244534|H1-3;ENSG00000124610|ENST00000244573|H1-1;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2 52.268347100219714 0.0353964759249114 2 AA{I|L}K 4 5 47.058 0.0 0.0 5.5003 0.0 0.0 0.0 469.2784517877563 469.2784517877563 29.76735336894584 0.0 0.0 0.0 0 0.9802046884880936 1.5228787452803376 0.0 0.0 + AA{I|L}K 5.5003 + + 156 + 1 2.13 88394.4 1.0 984 3091 4074 DOHH2_400M_050219_2,4077 DOHH2_400M_050219_2,4077,AALKKALAA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4078 20.26 147.0 514710.0 25 0 92658.0 + 5133 DIHKKMVV 8 92 485.2815644995688 968.5485760659376 2 485.2812072634697 MULTI CID FTMS 0 0 0 4074 227253.03125 0.3888621463578027 -3 0.0695915222167968 4 Unmodified _DIHKKMVV_ ENSG00000221823|ENST00000234310|PPP3R1 46.020951573049366 0.1579632664462935 2 VEH 3 7 51.172 0.0 0.0 5.2834 0.0 0.0 0.0 600.3543795221311 600.3543795221311 33.429862658764264 0.0 0.0 0.0 0 0.8252574989159953 2.0 0.4247425010840047 0.0 VEH 5.2834 - 160 + 1 2.13 63255.4 1.0 985 3091 4074 DOHH2_400M_050219_2,4078 DOHH2_400M_050219_2,4078,DIHKKMVV False True DIHKKMVV 20.260135 485.28120726347 2185195.5 4074.0 ENSG00000221823|ENST00000234310|PPP3R1 4.941642602284749 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4079 20.269 522.0 283150.0 25 0 32842.0 + -1 DSDRYRDGYRDGY 13 98 546.5692011069838 1636.6857739211512 3 546.9037963747978 MULTI CID FTMS 0 0 0 4074 136630.546875 0.7944021090410719 -2 0.0472335815429687 5 Acetyl (Protein N-term),3 Carbamidomethyl (C) _(Acetyl (Protein N-term))WC(Carbamidomethyl (C))HRIAC(Carbamidomethyl (C))C(Carbamidomethyl (C))RYN_ ENSG00000063046|ENST00000262056|EIF4B;nc|ENSG00000063046|P23588-2|EIF4B 0.4545168274142398 0.8730034954726786 2 DSDRQQD 7 -1 46.832 0.0 0.0 2.8614 0.0 0.0 0.0 789.3262665409948 789.3262665409948 25.37839947046882 0.0 0.0 0.0 0 1.4564608101803795 1.3979400086720375 0.0 0.3807196863200844 DSDRQQD 2.8614 - 113 + 1 2.13 114044.5 1.0 986 3091 4074 DOHH2_400M_050219_2,4079 DOHH2_400M_050219_2,4079,WCHRIACCRYN False False DSDRYRDGYRDGY 20.269331 546.5698 1150062.75 4074.0 ENSG00000063046|ENST00000262056|EIF4B;;nc|ENSG00000063046|P23588-2|EIF4B 8.008715311686197 3.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4081 20.274 13.0 4102700.0 25 0 311150.0 + 35227 SSDPYHSGY 9 81 506.703922326974 1011.393291720748 2 506.7041808962822 MULTI CID FTMS 0 0 0 4080 4308019.5 0.6883942653246129 5 -0.1122283935546875 1 Unmodified _SSDPYHSGY_ ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT 67.34385681178166 0.0221257235307089 2 {[CA]|SS}DPY[HS]GY 9 0 + 41.181 0.0 0.0 4.0717 4.0717 83.991 0.0 0.0 0.0 19.57711861032834 8.071968632008435 8.071968632008435 23.526909627198403 0 0.805462187404089 0.0 0.805462187404089 0.0 + + {[CA]|SS}DPY[HS]GY;{[CA]|SS}D[HT][{M(Oxidation (M))|F}V]GY;{[WN]|[YH]}PSGY{[C(Carbamidomethyl (C))E]|[WC]};{[CA]|SS}[C(Carbamidomethyl (C))K]{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))E]|[WC]};{[CA]|SS}[HT]D[{M(Oxidation (M))|F}V]GY;[HS][YG]PY{[C(Carbamidomethyl (C))E]|[WC]};[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}[HS]GY;{[WN]|[YH]}[SG]PY{[C(Carbamidomethyl (C))E]|[WC]};[HS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GY{[C(Carbamidomethyl (C))E]|[WC]} 4.0717;1.7455;1.5685;0.61185;0.60798;0.40565;0.36091;0.23154;0.1863 +;-;-;-;-;-;-;-;- + 237 + 1 2.13 48126.5 1.0 987 3092 4080 DOHH2_400M_050219_2,4081 DOHH2_400M_050219_2,4081,SSDPYHSGY True True SSDPYHSGY 20.273939 506.704180896282 110298276.0 4080.0 nc|ENSG00000087087|Q9BXP5-5|SRRT;;nc|ENSG00000087087|Q9BXP5-3|SRRT;;nc|ENSG00000087087|Q9BXP5-4|SRRT;;nc|ENSG00000087087|Q9BXP5-2|SRRT;;ENSG00000087087|ENST00000611405|SRRT 7.828544934590657 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4082 20.277 129.0 420640.0 25 0 34318.0 18614 LAERKTIS 8 81 459.2739621159917 916.5333712987834 2 459.2743102908134 MULTI CID FTMS 0 0 0 4080 360162.40625 0.3142348603277867 6 -0.1327667236328125 2 Unmodified _LAERKTIS_ ENSG00000181927|ENST00000641760|OR4P4 26.88365393820708 0.4786498634179528 2 {[TV]|[{I|L}S]}[Q{I|L}]RTS{I|L} 8 6 + 33.575 0.0 0.0 3.6632 3.6632 82.192 0.0 0.0 0.0 0.377477410450453 22.02593950323617 0.377477410450453 19.77926249355892 0 0.8494850021680094 0.958607314841775 0.0 0.0 {[TV]|[{I|L}S]}[Q{I|L}]RTS{I|L};[{I|L}A]{M(Oxidation (M))|F}{[NV]|[RG]}[Q{I|L}]{I|L} 3.6632;1.5052 -;- 51 1 2.13 48470.2 1.0 988 3092 4080 DOHH2_400M_050219_2,4082 DOHH2_400M_050219_2,4082,LAERKTIS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4084 20.281 38.0 1387700.0 25 0 223860.0 + 29758 QPQGSFAAPAI 11 72 543.7803756793202 1085.5461984254405 2 543.7806274294853 MULTI CID FTMS 0 0 0 4083 1596300.0 0.7347062762777276 4 -0.1048965454101562 1 Unmodified _QPQGSFAAPAI_ REV__ENSG00000175727|ENST00000319080|MLXIP;REV__ENST00000541750.1_12:122618368-122620257:+|nuORF;REV__nc|ENSG00000175727|Q9HAP2-2|MLXIP;REV__nc|ENSG00000175727|Q9HAP2-4|MLXIP 20.41453444215458 0.6105011870913812 2 [QP]QDT[WK]A{I|L} 9 -1 + 45.366 0.0 0.0 4.1791 4.1791 80.247 0.0 0.0 0.0 22.12189282359297 16.478174818886373 16.478174818886373 9.208187539523747 0 0.5 0.0 0.0 0.3252574989159953 [QP]QDT[WK]A{I|L};[QP][AG]DT[WK]A{I|L} 4.1791;3.3308 -;- 58 + 1 2.13 46284.5 1.0 989 3093 4083 DOHH2_400M_050219_2,4084 DOHH2_400M_050219_2,4084,QPQGSFAAPAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4085 20.286 227.0 331060.0 25 0 53012.0 + 37208 TIIDKSKSV 9 103 495.79505445245417 989.5755559717084 2 495.7953674197197 MULTI CID FTMS 0 0 0 4083 229821.828125 0.6566277560126009 -3 0.0847244262695312 2 Unmodified _TIIDKSKSV_ ENSG00000112972|ENST00000325110|HMGCS1;ENST00000507004.1_1_5:43298575-43313480:-|nuORF;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 32.78568957990786 0.1150597335874693 2 [{I|L}T]{I|L}DK 5 4 47.263 0.0 0.0 4.7761 0.0 0.0 0.0 416.21601282291255 416.21601282291255 23.85406449617868 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + [{I|L}T]{I|L}DK 4.7761 + + 333 + 1 2.13 61448.4 1.0 990 3093 4083 DOHH2_400M_050219_2,4085 DOHH2_400M_050219_2,4085,TIIDKSKSV True True TIIDKSKSV 20.285543 495.79536741972 1319993.75 4083.0 ENST00000507004.1_1_5:43298575-43313480:-|nuORF;;ENSG00000112972|ENST00000325110|HMGCS1;;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 1.2109880844751997 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4086 20.287 87.0 757220.0 25 0 102290.0 39466 VAPYRPDQ 8 69 473.24367902150607 944.4728051098122 2 473.2430602908134 MULTI CID FTMS 0 0 0 4083 475370.0 0.8404116049179734 -1 0.0073318481445312 3 Unmodified _VAPYRPDQ_ ENSG00000109111|ENST00000314616|SUPT6H 15.847184025352805 0.6768015514314958 2 {[VA]|[{I|L}G]}PY 4 4 39.45 0.0 0.0 4.177 0.0 0.0 0.0 511.22752782539175 511.22752782539175 32.4607625286837 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {[VA]|[{I|L}G]}PY 4.177 + + 32 + 1 2.13 57797.1 1.0 991 3093 4083 DOHH2_400M_050219_2,4086 DOHH2_400M_050219_2,4086,VAPYRPDQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4087 20.301 800.0 154800.0 25 0 8319.4 + 11156 GEKQINQEY 9 148 554.7669818904966 1107.519410847793 2 554.7671386599541 MULTI CID FTMS 0 0 0 4083 167728.1875 0.6719790126983992 -3 0.0847244262695312 4 Unmodified _GEKQINQEY_ ENSG00000144034|ENST00000272424|TPRKB;ENST00000463231.5_1_2:73956300-73964442:-|nuORF;ENST00000489476.5_1_2:73956300-73964431:-|nuORF;ENST00000497464.5_1_2:73957656-73964442:-|nuORF;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB 82.5293158979368 0.0169039238599547 2 {[DA]|[EG]}KQ{I|L}NAGEY 10 2 + 82.819 0.0 0.0 7.4779 7.4779 89.046 0.0 0.0 0.0 16.760912590556813 11.20506544868192 11.20506544868192 7.769250191953688 0 1.1822333069283657 1.3010299956639813 0.75 1.8882104921644447 {[DA]|[EG]}KQ{I|L}NAGEY;{[DA]|[EG]}KQ{I|L}NQEY;{[DA]|[EG]}K[AG]{I|L}NAGEY;{[DA]|[EG]}KQ{I|L}GGAGEY;{[DA]|[EG]}A[KG]{I|L}NAGEY;{[DA]|[EG]}G[KA]{I|L}NAGEY;{[QN]|[E{I|L}]|[KN]}{[TV]|[{I|L}S]}{I|L}NAGEY;{[DA]|[EG]}K[AG]{I|L}NQEY;{[DA]|[EG]}KQ{I|L}GGQEY;{[DA]|[EG]}K[AG]{I|L}GGAGEY 7.4779;6.7764;6.6504;6.6504;6.4501;5.994;5.9645;5.9449;5.9449;5.8261 -;+;-;-;-;-;-;-;-;- + 2768 1 2.13 94850.6 0.6899999976158142 992 3093 4083 DOHH2_400M_050219_2,4087 DOHH2_400M_050219_2,4087,GEKQINQEY True True GEKQINQEY 20.301306 554.767138659954 1069567.75 4083.0 ENST00000463231.5_1_2:73956300-73964442:-|nuORF;;nc|ENSG00000144034|Q9Y3C4-3|TPRKB;;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;;ENST00000489476.5_1_2:73956300-73964431:-|nuORF;;ENSG00000144034|ENST00000272424|TPRKB;;ENST00000497464.5_1_2:73957656-73964442:-|nuORF 6.916312217712402 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4088 20.311 580.0 252870.0 25 0 32570.0 + 7109 EEMGHAETY 9 129 533.7108104685776 1065.4070680039551 2 534.2123901247978 MULTI CID FTMS 0 0 0 4083 110582.765625 0.7610969014106318 -2 0.0414638519287109 5 Unmodified _EEMGHAETY_ ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1 16.942295170755138 0.3780752226737986 2 TEC[HN]TY 7 5 31.246 0.0 0.0 2.9328 0.0 0.0 199.08361332553235 0.0 199.08361332553235 0.0 20.867785784952098 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.4247425010840047 TEC[HN]TY 2.9328 - 408 + 1 2.13 115254.7 1.0 993 3093 4083 DOHH2_400M_050219_2,4088 DOHH2_400M_050219_2,4088,EEMGHAETY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4090 20.316 60.0 1523700.0 25 0 205530.0 + 7567 EIKKRFRQL 9 81 406.5873334981831 1216.7401710947493 3 406.5873290896416 MULTI CID FTMS 0 0 0 4089 753351.5625 0.4181285200689895 7 -0.157419204711914 1 Unmodified _EIKKRFRQL_ ENSG00000126698|ENST00000263697|DNAJC8;ENST00000482674.5_1_1:28537058-28559509:-|nuORF;ENST00000488868.1_1_1:28537058-28556683:-|nuORF;ENST00000489277.5_1_1:28527761-28556683:-|nuORF 29.081581746732265 0.1611639662936252 2 E{I|L}K 3 6 40.445 0.0 0.0 3.3241 0.0 0.0 0.0 843.4969501009982 843.4969501009982 12.728787452803374 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.4247425010840047 + E{I|L}K 3.3241 + + 36 + 1 2.13 82257.2 1.0 994 3094 4089 DOHH2_400M_050219_2,4090 DOHH2_400M_050219_2,4090,EIKKRFRQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4091 20.32 212.0 327330.0 25 0 86065.0 -1 0 73 541.215979670621 540.2087032040209 1 541.2160522341728 MULTI CID FTMS 0 0 0 4089 201068.75 0.6426587064962845 5 -0.1168937683105468 2 2 Y 1 -1 14.604 0.0 0.0 2.7034 0.0 0.0 359.1338873854647 0.0 359.1338873854647 0.0 12.821357152192812 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.7034 - 7 + 1 2.13 57185.2 1.0 995 3094 4089 DOHH2_400M_050219_2,4091 DOHH2_400M_050219_2,4091, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4092 20.323 145.0 590760.0 25 0 269760.0 -1 0 59 434.2201181369816 433.2128416703816 1 434.2200195193291 MULTI CID FTMS 0 0 0 4089 294207.09375 0.2815730348638613 -7 0.1499366760253906 3 2 W 1 -1 12.764 0.0 0.0 2.9464 0.0 0.0 229.1234384494816 0.0 229.1234384494816 0.0 2.16827780469286 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.9464 - 4 + 1 2.13 73990.9 1.0 996 3094 4089 DOHH2_400M_050219_2,4092 DOHH2_400M_050219_2,4092, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4093 20.327 233.0 480370.0 25 0 63289.0 -1 0 85 422.2054424693021 421.1981660027021 1 422.2054015994072 MULTI CID FTMS 0 0 0 4089 105510.4921875 0.6371496709362394 3 -0.0700435638427734 4 2 {[DA]|[EG]}A 3 -1 21.783 0.0 0.0 5.1718 0.0 0.0 0.0 161.073598702174 161.073598702174 7.346368802282013 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 {[DA]|[EG]}A 5.1718 - 33 1 2.13 92160.9 1.0 997 3094 4089 DOHH2_400M_050219_2,4093 DOHH2_400M_050219_2,4093, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4095 20.344 800.0 108130.0 25 0 6253.0 29957 QSQRDIFHSNA 11 99 651.8123792439854 1301.6102055547708 2 651.8119994997978 MULTI CID FTMS 0 0 0 4094 143663.171875 0.7926692233629764 -1 0.0158901214599609 1 Unmodified _QSQRDIFHSNA_ nc|ENSG808|P60509|ERVPABLB-1 22.65808497894818 0.560183898709508 2 [AG]SP[WR]AASQSAN 13 10 + 72.95 0.0 0.0 5.6046 5.6046 78.831 0.0 0.0 0.0 3.4449568944507263 9.072459467631012 3.4449568944507263 3.4449568944507263 0 1.0 1.5228787452803376 2.004432191740108 0.0 [AG]SP[WR]AASQSAN;{[SA]|[TG]}GP[WR]AASQSAN;[AG]SP[WR]AAS[AG]SAN;{[QS]|[NT]}P[WR]AASQSAN;{[TV]|[{I|L}S]}[HS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PSQSAN;[AG][RN]QQAASQSAN;{[DA]|[EG]}[RV]{[{M(Oxidation (M))|F}H]|[RQ]}ASQSAN;{[SA]|[TG]}GP[WR]AAS[AG]SAN;[PS]Q[WR]AASQSAN;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ASQSAN 5.6046;5.3399;4.9076;4.9068;4.7487;4.702;4.6747;4.6429;4.6077;4.5114 -;-;-;-;-;-;-;-;-;- 830 1 2.13 67245.7 0.5099999904632568 998 3095 4094 DOHH2_400M_050219_2,4095 DOHH2_400M_050219_2,4095,QSQRDIFHSNA False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 4096 20.347 185.0 488750.0 25 0 93261.0 + 26312 NRIIKNEV 8 103 493.2937278230224 984.5729027128448 2 493.2948791384697 MULTI CID FTMS 0 0 0 4094 252883.9375 0.4964001221449567 -4 0.0922069549560546 2 Unmodified _NRIIKNEV_ ENSG00000188846|ENST00000396203|RPL14 58.6788170122104 0.1149141431586871 2 [RN]{I|L}{I|L}KNEV 8 0 + 55.594 0.0 0.0 5.6465 5.6465 86.892 0.0 0.0 0.0 10.253187046026262 32.0377561084694 10.253187046026262 9.262137858390815 0 0.6307196863200845 0.0 0.0 1.3703715150305282 + + [RN]{I|L}{I|L}KNEV;[RN]{I|L}{I|L}KGGEV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}][R{I|L}]EV;[RN][KA][R{I|L}]EV;[RN]{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}P];{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]{[WT]|[RM]}[{I|L}P] 5.6465;4.7058;3.6362;1.7564;0.75978;0.58198 +;-;-;-;-;- + 144 1 2.13 72812.9 1.0 999 3095 4094 DOHH2_400M_050219_2,4096 DOHH2_400M_050219_2,4096,NRIIKNEV True True NRIIKNEV 20.347166 493.29487913847 1836191.875 4094.0 ENSG00000188846|ENST00000396203|RPL14 5.143041928609212 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4097 20.351 197.0 354020.0 25 0 43187.0 + 41750 VPTNSNVAL 9 94 457.7516378449352 913.4887227566704 2 457.7507812380791 MULTI CID FTMS 0 0 0 4094 158760.875 0.4564135592617351 11 -0.2320003509521484 3 Unmodified _VPTNSNVAL_ REV__ENSG00000169018|ENST00000306917|FEM1B 26.88365393820708 0.1891292719743517 2 VPNE 4 -1 45.918 0.0 0.0 5.0266 0.0 0.0 0.0 471.25779138736567 471.25779138736567 25.138210200089777 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.4247425010840047 VPNE 5.0266 - 202 + 1 2.13 58113.0 1.0 1000 3095 4094 DOHH2_400M_050219_2,4097 DOHH2_400M_050219_2,4097,VPTNSNVAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4099 20.356 31.0 1933200.0 25 0 297310.0 + -1 LTGWPLTMK 9 80 531.7848194303747 1061.5550859275493 2 531.7844726443291 MULTI CID FTMS 0 0 0 4098 1711564.625 0.8396303435805411 -5 0.1157493591308593 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 39.94969957227396 0.0757326808254658 2 K[HQ][{I|L}P]T{M(Oxidation (M))|F}K 8 -1 45.724 0.0 0.0 4.3072 0.0 0.0 63.99885115418869 0.0 63.99885115418869 0.0 25.27819381628923 0.0 0.0 0 1.924742501084005 0.0 0.9247425010840048 0.2614393726401688 K[HQ][{I|L}P]T{M(Oxidation (M))|F}K 4.3072 - 160 + 1 2.13 54038.1 1.0 1001 3096 4098 DOHH2_400M_050219_2,4099 DOHH2_400M_050219_2,4099,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4100 20.36 236.0 423250.0 25 0 35184.0 + 609 AEKELHEKF 9 122 377.5328442233503 1129.5767032702508 3 377.5325805544853 MULTI CID FTMS 0 0 0 4098 173128.953125 0.9417593771338904 -1 0.0235424041748046 2 Unmodified _AEKELHEKF_ ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;ENST00000467310.1_1_X:118753883-118767379:-|nuORF;ENST00000481072.1_1_X:118763279-118767388:-|nuORF;ENST00000512575.5_1_4:77871042-77955662:+|nuORF;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11 17.86316937532769 0.3531482428618743 2 EKDQQ[RH]A 8 7 25.252 0.0 0.0 2.2355 0.0 0.0 119.0739994733414 0.0 119.0739994733414 0.0 1.8677713352057168 0.0 0.0 0 0.0 0.0 0.7302046884880938 0.25 EKDQQ[RH]A 2.2355 - 280 1 2.13 84636.2 1.0 1002 3096 4098 DOHH2_400M_050219_2,4100 DOHH2_400M_050219_2,4100,AEKELHEKF False True AEKELHEKF 20.359964 377.532580554485 719351.3125 4098.0 ENST00000481072.1_1_X:118763279-118767388:-|nuORF;;nc|ENSG00000125354|Q14141-4|SEPTIN6;;ENST00000512575.5_1_4:77871042-77955662:+|nuORF;;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;;nc|ENSG00000125354|Q14141|SEPTIN6;;ENSG00000125354|ENST00000394610|SEPTIN6;;ENST00000467310.1_1_X:118753883-118767379:-|nuORF;;ENSG00000138758|ENST00000264893|SEPTIN11 4.848176002502441 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4101 20.374 800.0 190730.0 25 0 45200.0 3947 DALLKEDDPSY 11 98 633.2989593557088 1264.5833657782175 2 633.2990600466728 MULTI CID FTMS 0 0 0 4098 131917.4375 0.6202860112093119 -3 0.0742855072021484 3 Unmodified _DALLKEDDPSY_ ENSG00000116497|ENST00000373475|S100PBP;ENST00000356689.7_1_1:33290993-33299636:+|nuORF;ENST00000531123.5_1_1:33290993-33299636:+|nuORF;nc|ENSG00000116497|Q96BU1-2|S100PBP 15.248480904072842 0.7179608125786238 2 {[DA]|[EG]}Y 3 8 24.169 0.0 0.0 1.9112 0.0 0.0 0.0 912.4334688878456 912.4334688878456 6.694699959806982 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 {[DA]|[EG]}Y 1.9112 - 200 1 2.13 114350.7 0.6299999952316284 1003 3096 4098 DOHH2_400M_050219_2,4101 DOHH2_400M_050219_2,4101,DALLKEDDPSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4102 20.379 263.0 277910.0 25 0 36469.0 + -1 MYFYRREAREK 11 83 522.2607330566723 1563.7603697702166 3 522.5963622927666 MULTI CID FTMS 0 0 0 4098 120221.2890625 0.5833024150666243 -10 0.1940574645996093 4 Oxidation (M) _M(Oxidation (M))YFYRREAREK_ REV__ENST00000531768.1_1_11:77402049-77404650:-|nuORF 2.434785330301024 0.8636604596255422 2 {I|L}K{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[ES]|[DT]|[{I|L}C]}P{I|L}{I|L}EK 11 -1 24.283 0.0 0.0 1.5528 0.0 0.0 214.0047848374009 0.0 214.0047848374009 0.0 15.699275183344184 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.3494850021680094 {I|L}K{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[ES]|[DT]|[{I|L}C]}P{I|L}{I|L}EK 1.5528 - 75 + 1 2.13 59940.1 1.0 1004 3096 4098 DOHH2_400M_050219_2,4102 DOHH2_400M_050219_2,4102,MYFYRREAREK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4103 20.382 143.0 422640.0 25 0 128860.0 + -1 MVYPLSRCR 9 83 394.5350621507851 1180.5833570525554 3 394.5347473025322 MULTI CID FTMS 0 0 0 4098 94913.7421875 0.418573198394443 4 -0.0814628601074218 5 Carbamidomethyl (C) _MVYPLSRC(Carbamidomethyl (C))R_ REV__ENST00000511810.5_1_5:235190-235547:+|nuORF 2.9952420565917617 0.8101217823238775 2 Y 1 -1 15.485 0.0 0.0 1.3116 0.0 0.0 999.5090905504054 0.0 999.5090905504054 0.0 5.730640178391191 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3116 + + 8 + 1 2.13 51330.2 1.0 1005 3096 4098 DOHH2_400M_050219_2,4103 DOHH2_400M_050219_2,4103,MVYPLSRCR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4105 20.387 104.0 415720.0 25 0 25545.0 + 4771 DEKRDFRTY 9 70 410.5349488073888 1228.5830170223664 3 410.5350219607353 MULTI CID FTMS 0 0 0 4104 360613.0 0.3658456213257685 5 -0.1095485687255859 1 Unmodified _DEKRDFRTY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF 29.84058131909904 0.1515068451768857 2 DE[RK]D{M(Oxidation (M))|F}RTY 9 0 + 59.253 0.0 0.0 4.8229 4.8229 88.29 0.0 0.0 0.0 46.15410615618644 8.618187372417346 8.618187372417346 59.253049947628405 0 0.3494850021680094 2.0 0.5 0.0 + + DE[RK]D{M(Oxidation (M))|F}RTY 4.8229 + + 41 + 1 2.128 41099.0 1.0 1006 3097 4104 DOHH2_400M_050219_2,4105 DOHH2_400M_050219_2,4105,DEKRDFRTY False True DEKRDFRTY 20.387465 410.535021960735 9681167.0 4104.0 ENST00000562272.5_1_16:23691188-23701381:+|nuORF;;ENSG00000166851|ENST00000300093|PLK1 7.32200272878011 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4106 20.39 107.0 959950.0 25 0 107100.0 + 4760 DEIEWHIVQN 10 88 428.2056964189842 1281.5952598571523 3 428.2054626345634 MULTI CID FTMS 0 0 0 4104 374005.34375 0.1241819444522841 -6 0.1463603973388672 2 Unmodified _DEIEWHIVQN_ REV__ENSG00000134759|ENST00000358232|ELP2;REV__ENST00000535488.5_1_18:33709896-33718439:+|nuORF;REV__ENST00000540135.5_1_18:33709896-33719635:+|nuORF;REV__ENST00000541190.5_1_18:33709896-33716400:+|nuORF;REV__nc|ENSG00000134759|Q6IA86-2|ELP2;REV__nc|ENSG00000134759|Q6IA86-3|ELP2;REV__nc|ENSG00000134759|Q6IA86-4|ELP2;REV__nc|ENSG00000134759|Q6IA86-5|ELP2;REV__nc|ENSG00000134759|Q6IA86-6|ELP2;REV__nc|ENSG00000134759|Q6IA86-7|ELP2 20.41453444215458 0.5050059513928961 2 DE{I|L}E 4 -1 59.553 0.0 0.0 4.6468 0.0 0.0 0.0 792.3765619381828 792.3765619381828 52.32061891068248 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.0 DE{I|L}E 4.6468 + + 53 + 1 2.128 87147.2 1.0 1007 3097 4104 DOHH2_400M_050219_2,4106 DOHH2_400M_050219_2,4106,DEIEWHIVQN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4107 20.392 111.0 479060.0 25 0 83376.0 + -1 AETEPIVKM 9 74 517.2650363875157 1032.5155198418313 2 517.2656127810478 MULTI CID FTMS 0 0 0 4104 310944.71875 1.0 0 0.0 3 Oxidation (M) _AETEPIVKM(Oxidation (M))_ ENST00000518442.5_1_8:109247181-109261015:-|nuORF;ENSG00000104408|ENST00000220849|EIF3E 20.453626601364224 0.2830276176381075 2 [{I|L}P]VKT{[DS]|[MA]|[CV]|TT}[C(Carbamidomethyl (C))N] 9 -1 + 15.286 0.0 0.0 1.4805 1.4805 72.186 0.0 0.0 0.0 0.2274581129752331 1.2718185701353342 0.2274581129752331 7.134928107446196 0 0.0 1.0457574905606752 0.4247425010840047 0.0 [{I|L}P]VKT{[DS]|[MA]|[CV]|TT}[C(Carbamidomethyl (C))N];{[ET]|[MV]}AVV[Q{I|L}][C(Carbamidomethyl (C))N];{[CP]|[EA]}TVV[K{I|L}][C(Carbamidomethyl (C))N];[YE][K{I|L}][TP]A[DP];[YE][Q{I|L}]VVE[PG];[{I|L}P]VKT{[ET]|[MV]}[MD];[YE][K{I|L}][TP]E[PG];{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]T{[DS]|[MA]|[CV]|TT}[C(Carbamidomethyl (C))N] 1.4805;0.78943;0.78514;0.55405;0.49359;0.48599;0.2582;0.056143 -;-;-;-;-;-;-;- 207 1 2.128 47172.9 1.0 1008 3097 4104 DOHH2_400M_050219_2,4107 DOHH2_400M_050219_2,4107,AETEPIVKM False False AETEPIVKM 20.392076 517.265612781048 1657309.5 4104.0 ENST00000518442.5_1_8:109247181-109261015:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 6.1981401443481445 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4108 20.399 408.0 404770.0 25 0 92424.0 + 4762 DEIEWHIVQN 10 81 641.8044549581358 1281.5943569830715 2 641.8049194216728 MULTI CID FTMS 0 0 0 4104 186786.15625 0.0996600044111357 -5 0.1122283935546875 4 Unmodified _DEIEWHIVQN_ REV__ENSG00000134759|ENST00000358232|ELP2;REV__ENST00000535488.5_1_18:33709896-33718439:+|nuORF;REV__ENST00000540135.5_1_18:33709896-33719635:+|nuORF;REV__ENST00000541190.5_1_18:33709896-33716400:+|nuORF;REV__nc|ENSG00000134759|Q6IA86-2|ELP2;REV__nc|ENSG00000134759|Q6IA86-3|ELP2;REV__nc|ENSG00000134759|Q6IA86-4|ELP2;REV__nc|ENSG00000134759|Q6IA86-5|ELP2;REV__nc|ENSG00000134759|Q6IA86-6|ELP2;REV__nc|ENSG00000134759|Q6IA86-7|ELP2 26.268140514670165 0.3785003716575977 2 DE 2 -1 39.949 0.0 0.0 3.1171 0.0 0.0 0.0 1034.5029458695694 1034.5029458695694 8.873409493950675 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 DE 3.1171 + + 263 + 1 2.128 123462.3 1.0 1009 3097 4104 DOHH2_400M_050219_2,4108 DOHH2_400M_050219_2,4108,DEIEWHIVQN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4109 20.402 131.0 394420.0 25 0 58952.0 + 37082 TGLKPQLF 8 78 452.2669674316792 902.5193819301584 2 453.2694885134697 MULTI CID FTMS 0 0 0 4104 169210.21875 1.0 0 0.0 5 Unmodified _TGLKPQLF_ REV__ENST00000375204.2_1_9:100053158-100058044:+|nuORF 8.593279151180031 0.7721714526254883 2 {I|L} 1 -1 11.42 0.0 0.0 1.2653 0.0 0.0 771.4245618391413 0.0 771.4245618391413 0.0 0.4508831517454403 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2653 + + 11 + 1 2.128 45456.1 1.0 1010 3097 4104 DOHH2_400M_050219_2,4109 DOHH2_400M_050219_2,4109,TGLKPQLF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4111 20.407 83.0 839240.0 25 0 352100.0 -1 0 72 472.2728565094546 471.2655800428546 1 472.2730285525322 MULTI CID FTMS 0 0 0 4110 477199.1875 0.8421185042929896 23 -0.4641685485839844 1 2 Y 1 -1 6.9897 0.0 0.0 1.4832 0.0 0.0 239.14396551824365 66.03568445377186 305.1796499720155 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4832 - 9 + 1 2.128 59782.9 1.0 1011 3098 4110 DOHH2_400M_050219_2,4111 DOHH2_400M_050219_2,4111, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4112 20.41 139.0 557490.0 25 0 260240.0 -1 0 65 490.2840509070462 489.2767744404462 1 490.2840148806572 MULTI CID FTMS 0 0 0 4110 447568.0625 0.5325510237926353 -57 1.201761245727539 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.128 65115.2 1.0 1012 3098 4110 DOHH2_400M_050219_2,4112 DOHH2_400M_050219_2,4112, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4113 20.421 650.0 237590.0 25 0 23284.0 + 40803 VLLPKKTSA 9 120 478.81082070239694 955.607088471594 2 478.8112060427666 MULTI CID FTMS 0 0 0 4110 113675.9375 0.2790110284995266 -4 0.0905818939208984 3 Unmodified _VLLPKKTSA_ ENSG00000188486|ENST00000530167|H2AX 36.506200033944 0.094635877243972 2 V{I|L}{I|L}PKKT{[SA]|[TG]} 9 0 + 67.229 0.0 0.0 7.0352 7.0352 96.23 0.0 0.0 0.0 51.13376837184731 3.7802217037673103 3.7802217037673103 67.22865638833312 0 0.8807196863200843 1.6989700043360187 0.3807196863200844 0.0 + + V{I|L}{I|L}PKKT{[SA]|[TG]} 7.0352 + + 290 + 1 2.128 119188.7 1.0 1013 3098 4110 DOHH2_400M_050219_2,4113 DOHH2_400M_050219_2,4113,VLLPKKTSA True True VLLPKKTSA 20.420826 478.811206042767 1662153.375 4110.0 ENSG00000188486|ENST00000530167|H2AX 5.42636251449585 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4114 20.428 425.0 278490.0 25 0 22947.0 + 6197 DTERESAVY 9 122 535.2434583503513 1068.4723637675024 2 535.2430908083916 MULTI CID FTMS 0 0 0 4110 157209.328125 0.1855097986461951 -8 0.2101593017578125 4 Unmodified _DTERESAVY_ ENST00000397532.7_1_14:23284899-23285010:-|nuORF 34.40172386719151 0.1061884637610825 2 AVY 3 6 30.93 0.0 0.0 2.8948 0.0 0.0 717.2933827130875 0.0 717.2933827130875 0.0 20.65227601951511 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + AVY 2.8948 + + 40 1 2.128 99259.7 1.0 1014 3098 4110 DOHH2_400M_050219_2,4114 DOHH2_400M_050219_2,4114,DTERESAVY True True DTERESAVY 20.428403 535.243090808392 4340519.5 4110.0 ENST00000397532.7_1_14:23284899-23285010:-|nuORF 1.23618487517039 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4117 20.449 800.0 138380.0 25 0 12434.0 + 7522 EHYRNRLK 8 128 558.3067744120175 1114.5989958908349 2 558.3062011599541 MULTI CID FTMS 0 0 0 4116 85874.0234375 0.7495658510499156 1 -0.0365238189697265 1 Unmodified _EHYRNRLK_ REV__ENSG00000159648|ENST00000441824|TEPP;REV__nc|ENSG00000159648|Q6URK8-2|SPMIP8 24.67388899826682 0.525179942228231 2 HTS 3 -1 35.635 0.0 0.0 3.1971 0.0 0.0 0.0 786.4358004205686 786.4358004205686 12.995587109089044 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.0 0.0 HTS 3.1971 - 233 + 1 2.128 85992.9 0.7799999713897705 1015 3100 4116 DOHH2_400M_050219_2,4117 DOHH2_400M_050219_2,4117,EHYRNRLK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4118 20.455 359.0 238520.0 25 0 64777.0 + 17597 KPTAAFHLL 9 95 499.29343876068185 996.5723245881636 2 499.2935363650322 MULTI CID FTMS 0 0 0 4116 126399.625 0.477552216489721 8 -0.1611080169677734 2 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 20.453626601364224 0.2830276176381075 2 KPT 3 -1 36.555 0.0 0.0 3.668 0.0 0.0 0.0 667.3537691705686 667.3537691705686 18.79034649851686 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 KPT 3.668 + + 36 + 1 2.128 69416.1 1.0 1016 3100 4116 DOHH2_400M_050219_2,4118 DOHH2_400M_050219_2,4118,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4119 20.469 800.0 277540.0 25 0 75033.0 + 31830 RTDIARTEY 9 115 562.7881827474985 1123.5618125617968 2 562.7880126833916 MULTI CID FTMS 0 0 0 4116 115715.0703125 0.1487285274644413 -8 0.1630802154541015 3 Unmodified _RTDIARTEY_ ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000556791.1_1_14:102499420-102503925:+|nuORF 40.72490554402381 0.0714771638475563 2 [VG]TD{I|L} 5 7 42.224 0.0 0.0 3.758 0.0 0.0 0.0 635.2806490533811 635.2806490533811 18.37221316344818 0.0 0.0 0.0 0 1.2302046884880935 1.3979400086720375 0.0 0.0 [VG]TD{I|L} 3.758 - 353 + 1 2.128 170381.6 0.7599999904632568 1017 3100 4116 DOHH2_400M_050219_2,4119 DOHH2_400M_050219_2,4119,RTDIARTEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4121 20.483 676.0 178340.0 25 0 30366.0 + -1 YLFDCIQDKEE 11 80 730.3222405654009 1458.6299281976017 2 730.3224365115166 MULTI CID FTMS 0 0 0 4120 231240.484375 0.2364858589698814 6 -0.1206436157226562 1 Carbamidomethyl (C) _YLFDC(Carbamidomethyl (C))IQDKEE_ REV__ENSG00000160957|ENST00000617875|RECQL4 8.155526934196011 0.8366696279279818 2 [Y{I|L}][C(Carbamidomethyl (C))M]NQDT{I|L}SS 11 -1 67.693 0.0 0.0 4.6408 0.0 0.0 0.0 143.08277307681877 143.08277307681877 53.7794228098481 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.064909327626439 0.7302046884880937 [Y{I|L}][C(Carbamidomethyl (C))M]NQDT{I|L}SS 4.6408 - 263 + 1 2.128 93012.6 1.0 1018 3101 4120 DOHH2_400M_050219_2,4121 DOHH2_400M_050219_2,4121,YLFDCIQDKEE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4122 20.491 451.0 236880.0 25 0 63442.0 -1 0 122 408.2409281619105 407.2336516953105 1 408.2410461306572 MULTI CID FTMS 0 0 0 4120 103700.65625 0.4678573898378279 -10 0.2337360382080078 2 2 VA 2 -1 14.693 0.0 0.0 3.6079 0.0 0.0 219.12579543281407 0.0 219.12579543281407 0.0 0.713337517843657 0.0 0.0 0 0.0 0.0 0.0 0.0 VA 3.6079 - 19 1 2.128 88333.0 1.0 1019 3101 4120 DOHH2_400M_050219_2,4122 DOHH2_400M_050219_2,4122, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4125 20.511 800.0 160550.0 25 0 12208.0 + 33045 SEPSEVRSY 9 149 527.245521297879 1052.476489662558 2 527.2463867068291 MULTI CID FTMS 0 0 0 4124 114916.015625 0.7679854552532466 -2 0.0259437561035156 1 Unmodified _SEPSEVRSY_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 57.72198328787511 0.0273433238377839 2 {[ES]|[DT]|[{I|L}C]}PSEVRSY 9 0 + 42.871 0.0 0.0 4.0734 4.0734 83.53 0.0 0.0 0.0 27.074732896553343 9.944313773229249 9.944313773229249 19.9619877965177 0 0.7742275032520141 0.0 0.6747425010840047 0.0 + + {[ES]|[DT]|[{I|L}C]}PSEVRSY;{[ES]|[DT]|[{I|L}C]}P{[ET]|[MV]}[{I|L}T]NY;{[ES]|[DT]|[{I|L}C]}PSEH[{I|L}A]SP;{[ES]|[DT]|[{I|L}C]}PSEH[PA]S{I|L};{[ES]|[DT]|[{I|L}C]}P{[ET]|[MV]}[Q{I|L}]SY;[PS]E[{I|L}T][YQ]{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}P{[NV]|[RG]}[KC]NY;{[ES]|[DT]|[{I|L}C]}PS{[{M(Oxidation (M))|F}H]|[RQ]}[HV]N;{[ES]|[DT]|[{I|L}C]}PS[DV][HV]SP;{[ES]|[DT]|[{I|L}C]}P[{I|L}T][YQ]{[ES]|[DT]|[{I|L}C]} 4.0734;2.1767;2.1054;1.8451;1.7986;1.7044;1.6943;1.6718;1.6411;1.5434 +;-;-;-;-;-;-;-;-;- + 436 + 1 2.128 104991.6 0.6700000166893005 1020 3103 4124 DOHH2_400M_050219_2,4125 DOHH2_400M_050219_2,4125,SEPSEVRSY True True SEPSEVRSY 20.511073 527.246386706829 927764.4375 4124.0 nc|ENSG00000178209|Q15149-5|PLEC;;nc|ENSG00000178209|Q15149-8|PLEC;;nc|ENSG00000178209|Q15149-6|PLEC;;nc|ENSG00000178209|Q15149|PLEC;;nc|ENSG00000178209|Q15149-9|PLEC;;nc|ENSG00000178209|Q15149-3|PLEC;;nc|ENSG00000178209|Q15149-7|PLEC;;nc|ENSG00000178209|Q15149-2|PLEC;;ENSG00000178209|ENST00000345136|PLEC 6.215073426564534 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4126 20.525 800.0 245590.0 25 0 34256.0 26831 PARRPAPL 8 159 439.2716056335117 876.5286583338235 2 439.2709228396416 MULTI CID FTMS 0 0 0 4124 102251.515625 0.82643750035913 -2 0.0259437561035156 2 Unmodified _PARRPAPL_ ENST00000298556.7_1_X:133594306-133607389:+|nuORF;ENST00000521478.1_1_7:27187126-27190080:-|nuORF 26.34127834903884 0.4900704351052977 2 {I|L}A 2 7 19.464 0.0 0.0 2.2206 0.0 0.0 0.0 689.384585858511 689.384585858511 3.979400086720375 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A 2.2206 - 146 + 1 2.128 154618.3 0.6000000238418579 1021 3103 4124 DOHH2_400M_050219_2,4126 DOHH2_400M_050219_2,4126,PARRPAPL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4127 20.539 800.0 127020.0 25 0 12423.0 + 19111 LDTNADKQLS 10 138 552.7806477365573 1103.5467425399145 2 552.7822753787041 MULTI CID FTMS 0 0 0 4124 107693.7421875 0.6372957572543206 -2 0.0259437561035156 3 Unmodified _LDTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 42.86227185956083 0.1273421190728565 2 {I|L}DTN[WK]Q{I|L}S 9 2 + 75.216 0.0 0.0 6.8158 6.8158 88.264 0.0 0.0 0.0 28.62629103634589 8.747631900195032 8.747631900195032 8.747631900195032 0 1.805462187404089 1.6989700043360187 0.908628003777275 0.805462187404089 {I|L}DTN[WK]Q{I|L}S;{I|L}DTN[WK]QS{I|L};{I|L}DTGG[WK]Q{I|L}S;{I|L}DTN[WK][AG]{I|L}S;{I|L}DTGG[WK]QS{I|L};{I|L}D[RP][{M(Oxidation (M))|F}E]Q{I|L}S;{I|L}DTN[WK][AG]S{I|L};{I|L}D[YR]S[HN]{I|L}S;{I|L}D[RP][{M(Oxidation (M))|F}E]QS{I|L};{I|L}EEKEEQ{I|L}S 6.8158;6.0231;5.9814;5.6364;5.1887;4.8914;4.8437;4.2743;4.0987;3.7119 -;-;-;-;-;-;-;-;-;- 3175 + 1 2.128 79633.1 0.699999988079071 1022 3103 4124 DOHH2_400M_050219_2,4127 DOHH2_400M_050219_2,4127,LDTNADKQLS True True LDTNADKQLS 20.538719 552.782275378704 682754.9375 4124.0 ENSG00000163220|ENST00000368738|S100A9 2.870413859685262 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4129 20.545 198.0 283280.0 25 0 40305.0 + 29759 QPQGSFAAPAI 11 62 543.7803756793202 1085.5461984254405 2 543.7804443240166 MULTI CID FTMS 0 0 0 4128 246732.15625 0.1135598971098239 15 -0.262176513671875 1 Unmodified _QPQGSFAAPAI_ REV__ENSG00000175727|ENST00000319080|MLXIP;REV__ENST00000541750.1_12:122618368-122620257:+|nuORF;REV__nc|ENSG00000175727|Q9HAP2-2|MLXIP;REV__nc|ENSG00000175727|Q9HAP2-4|MLXIP 26.268140514670165 0.4754186812857754 2 [QP]QD 4 -1 23.698 0.0 0.0 2.183 0.0 0.0 0.0 614.3272807128826 614.3272807128826 2.244237387763093 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3252574989159953 [QP]QD 2.183 - 38 + 1 2.128 46921.9 1.0 1023 3104 4128 DOHH2_400M_050219_2,4129 DOHH2_400M_050219_2,4129,QPQGSFAAPAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4130 20.547 86.0 673120.0 25 0 142480.0 + 35228 SSDPYHSGY 9 76 506.703922326974 1011.393291720748 2 506.7039672732353 MULTI CID FTMS 0 0 0 4128 493173.78125 0.0788060506274298 17 -0.3274059295654297 2 Unmodified _SSDPYHSGY_ ENSG00000087087|ENST00000611405|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-5|SRRT 44.40701690623563 0.0526327925666318 2 {[C(Carbamidomethyl (C))E]|[WC]}PY[HS]GY 8 3 + 21.476 0.0 0.0 2.1234 2.1234 65.419 0.0 0.0 0.0 4.486381355812981 1.0134220474816402 1.0134220474816402 1.0134220474816402 0 0.0 0.0 0.6861818737241735 0.0 {[C(Carbamidomethyl (C))E]|[WC]}PY[HS]GY;{[C(Carbamidomethyl (C))E]|[WC]}P[YT]{[QS]|[NT]}Q;{[C(Carbamidomethyl (C))E]|[WC]}[HT][{M(Oxidation (M))|F}V]GY;{[CA]|SS}[C(Carbamidomethyl (C))K]{[QD]|[EN]|[WG]|[KD]|[RS]}C(Carbamidomethyl (C))Q 2.1234;2.0232;0.26509;0.25804 -;-;-;- 150 + 1 2.128 49201.2 1.0 1024 3104 4128 DOHH2_400M_050219_2,4130 DOHH2_400M_050219_2,4130,SSDPYHSGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4131 20.555 480.0 303540.0 25 0 93093.0 -1 0 155 362.1958949266472 361.1886184600472 1 362.1981994509697 MULTI CID FTMS 0 0 0 4128 87623.75 0.7879930515669981 -1 0.0439815521240234 3 2 ED 2 -1 20.969 0.0 0.0 5.8056 0.0 0.0 99.10535628486484 0.0 99.10535628486484 0.0 6.365006360318688 0.0 0.0 0 0.0 0.0 0.0 0.0 ED 5.8056 - 23 1 2.128 120183.2 1.0 1025 3104 4128 DOHH2_400M_050219_2,4131 DOHH2_400M_050219_2,4131, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4134 20.576 800.0 147460.0 25 0 19366.0 + -1 LDTSAKAT 8 152 424.7227301017743 847.4309072703486 2 424.7216979861259 MULTI CID FTMS 0 0 0 4133 101413.1171875 0.6103389973157246 4 -0.0781364440917968 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LDTSAKAT_ REV__ENSG00000145012|ENST00000617246|LPP 10.073929032068715 0.7620901558688216 2 DT[QT]TK 6 -1 27.867 0.0 0.0 3.2884 0.0 0.0 155.0948278977292 0.0 155.0948278977292 0.0 14.76789385964942 0.0 0.0 0 0.6747425010840047 0.0 0.7302046884880937 0.1421590589602531 DT[QT]TK 3.2884 - 149 + 1 2.128 96552.1 0.6200000047683716 1026 3106 4133 DOHH2_400M_050219_2,4134 DOHH2_400M_050219_2,4134,LDTSAKAT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4135 20.589 800.0 182470.0 25 0 15091.0 + + 20052 LLQPRGASA 9 149 456.7666914248385 911.518829916477 2 456.7671691775322 MULTI CID FTMS 0 0 0 4133 84818.828125 0.1871646682088326 -10 0.2084579467773437 2 Oxidation (M) _LIQPVVPM(Oxidation (M))_ ENSG00000131650|ENST00000303746|KREMEN2;nc|ENSG00000131650|Q8NCW0-5|KREMEN2;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;nc|ENSG00000131650|Q8NCW0-4|KREMEN2;nc|ENSG00000131650|Q8NCW0-6|KREMEN2;nc|ENSG00000131650|Q8NCW0-3|KREMEN2 42.96799951952854 0.1846367511955703 2 {I|L}{I|L}QP[VP]V{M(Oxidation (M))|F} 8 -1 + 56.79 0.0 0.0 6.2303 6.2303 85.632 0.0 0.0 0.0 41.30565484794506 1.268510796341964 1.268510796341964 7.749588446759894 0 0.7302046884880937 2.0 0.0 0.3807196863200844 {I|L}{I|L}QP[VP]V{M(Oxidation (M))|F};{I|L}{I|L}[KT][YK]{M(Oxidation (M))|F};{I|L}{I|L}QP[WQ]K;{I|L}{I|L}QP{[SA]|[TG]}{[NV]|[RG]}A;{I|L}{I|L}QK[WQ]P;{I|L}{I|L}QK{[QD]|[EN]|[WG]|[KD]|[RS]}PA;{I|L}{I|L}[AG]P[VP]V{M(Oxidation (M))|F};{I|L}{I|L}QK{[QD]|[EN]|[WG]|[KD]|[RS]}AP;{I|L}{I|L}{[HG]|PP}{[NV]|[RG]}{I|L}{M(Oxidation (M))|F};{I|L}{I|L}[AG]P[WQ]K 6.2303;5.3801;5.3197;5.1476;5.0905;5.0714;4.7965;4.6349;4.401;4.2961 -;-;-;-;-;-;-;-;-;- 388 + 1 2.128 117868.4 0.5899999737739563 1027 3106 4133 DOHH2_400M_050219_2,4135 DOHH2_400M_050219_2,4135,LIQPVVPM False False LLQPRGASA 20.589398 456.767169177532 4902030.0 4133.0 ENSG00000131650|ENST00000303746|KREMEN2;;nc|ENSG00000131650|Q8NCW0-5|KREMEN2;;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;;nc|ENSG00000131650|Q8NCW0-4|KREMEN2;;nc|ENSG00000131650|Q8NCW0-6|KREMEN2;;nc|ENSG00000131650|Q8NCW0-3|KREMEN2 4.249406337738037 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4138 20.61 800.0 170060.0 25 0 27202.0 -1 MTFNLCLSL 9 114 557.7650789822687 1113.5156050313374 2 557.7637206912041 MULTI CID FTMS 0 0 0 4137 67213.5546875 0.5433885115732572 -8 0.1611080169677734 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))TFNLC(Carbamidomethyl (C))LSL_ ENST00000466808.2_1_6:26428955-26431840:+|nuORF;nc|ENSG00000291104|Q96KV6|BTN2A3P 7.289230182591677 0.6602208344931196 2 K[RK]YT{M(Oxidation (M))|F}K 7 -1 33.808 0.0 0.0 3.0362 0.0 0.0 143.9544783278347 0.0 143.9544783278347 0.0 17.406111717311305 0.0 0.0 0 0.0 0.0 1.25 0.2134679910804404 K[RK]YT{M(Oxidation (M))|F}K 3.0362 - 609 + 1 2.128 107279.0 0.6499999761581421 1028 3108 4137 DOHH2_400M_050219_2,4138 DOHH2_400M_050219_2,4138,MTFNLCLSL False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_2 4139 20.615 295.0 298650.0 25 0 21633.0 + 29963 QSRQEEAQL 9 119 363.517459470326 1087.530549011178 3 363.5174438357353 MULTI CID FTMS 0 0 0 4137 114920.015625 0.3768964526987555 -3 0.0380668640136718 2 Unmodified _QSRQEEAQL_ REV__MLT2A2_dup484|chr2:159905847-159906376:+|1.770550606871378|0.1336351241991038|3.73|48.0|23|2|anti-sense 13.90604991867851 0.4602628045680013 2 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EAEHG 7 -1 41.291 0.0 0.0 3.7968 0.0 0.0 0.0 302.1399935358032 302.1399935358032 28.57463842698671 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EAEHG 3.7968 - 310 + 1 2.128 72718.3 1.0 1029 3108 4137 DOHH2_400M_050219_2,4139 DOHH2_400M_050219_2,4139,QSRQEEAQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4140 20.629 800.0 217700.0 25 0 23979.0 + 17569 KPQRLESPA 9 127 513.2899443705112 1024.5653358078223 2 513.2891723513603 MULTI CID FTMS 0 0 0 4137 101670.734375 0.2025247119024862 -6 0.1024112701416015 3 Unmodified _KPQRLESPA_ REV__ENSG00000147804|ENST00000301305|SLC39A4;REV__nc|ENSG00000147804|Q6P5W5-2|SLC39A4 25.399314129420983 0.2080152500878129 2 KPTW 4 -1 49.742 0.0 0.0 4.8549 0.0 0.0 0.0 509.2716158502562 509.2716158502562 28.19188338498354 0.0 0.0 0.0 0 1.2134679910804405 0.0 0.805462187404089 0.0 KPTW 4.8549 - 809 + 1 2.128 138706.3 0.6200000047683716 1030 3108 4137 DOHH2_400M_050219_2,4140 DOHH2_400M_050219_2,4140,KPQRLESPA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4142 20.634 73.0 726940.0 25 0 101960.0 + -1 LTGWPLTMK 9 66 531.7848194303747 1061.5550859275493 2 531.7842895388603 MULTI CID FTMS 0 0 0 4141 682789.875 0.3349514759570149 8 -0.1241340637207031 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 27.628801355627647 0.1796483985696185 2 [KT]T{[TV]|[{I|L}S]}HTTK 9 -1 50.995 0.0 0.0 4.8038 0.0 0.0 0.0 60.976747871584536 60.976747871584536 34.51574222902151 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.174742501084005 0.2887254899964357 [KT]T{[TV]|[{I|L}S]}HTTK 4.8038 - 211 1 2.13 47275.8 1.0 1031 3109 4141 DOHH2_400M_050219_2,4142 DOHH2_400M_050219_2,4142,LTGWPLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4143 20.637 152.0 359860.0 25 0 37109.0 + -1 MYFYRREAREK 11 74 522.2607330566723 1563.7603697702166 3 522.2606689333916 MULTI CID FTMS 0 0 0 4141 161796.421875 0.6936370893981813 9 -0.168069839477539 2 Oxidation (M) _M(Oxidation (M))YFYRREAREK_ REV__ENST00000531768.1_1_11:77402049-77404650:-|nuORF 2.434785330301024 0.8636604596255422 2 {I|L}EK 3 -1 28.773 0.0 0.0 1.84 0.0 0.0 1175.5274118618167 0.0 1175.5274118618167 0.0 8.767959391884546 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.3054621874040891 {I|L}EK 1.84 - 128 + 1 2.13 48464.7 1.0 1032 3109 4141 DOHH2_400M_050219_2,4143 DOHH2_400M_050219_2,4143,MYFYRREAREK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4145 20.645 266.0 182660.0 25 0 13210.0 + 608 AEKAYHEQL 9 91 544.7719751823563 1087.5293974315125 2 544.7715942263603 MULTI CID FTMS 0 0 0 4144 157895.921875 0.9362352099718444 -1 0.0085086822509765 1 Unmodified _AEKAYHEQL_ ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000437364.2_1_1:47358067-47358181:+|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C 51.487983226225225 0.0371074584807926 2 {[CP]|[EA]}KA 4 5 25.802 0.0 0.0 2.3725 0.0 0.0 0.0 685.2980440729124 685.2980440729124 7.5 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.3807196863200844 + {[CP]|[EA]}KA 2.3725 + + 222 + 1 2.13 41416.4 1.0 1033 3110 4144 DOHH2_400M_050219_2,4145 DOHH2_400M_050219_2,4145,AEKAYHEQL True True AEKAYHEQL 20.64483 544.77159422636 2997766.0 4144.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000127824|ENST00000248437|TUBA4A;;ENST00000437364.2_1_1:47358067-47358181:+|nuORF;;ENSG00000152086|ENST00000312988|TUBA3E;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000167553|ENST00000301072|TUBA1C;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;ENSG00000167552|ENST00000301071|TUBA1A;;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;;ENSG00000075886|ENST00000321253|TUBA3D;;ENSG00000198033|ENST00000400113|TUBA3C;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000198033|P0DPH7-2|TUBA3C;;nc|ENSG00000123416|P68363-2|TUBA1B;;nc|ENSG00000127824|P68366-2|TUBA4A 8.008461634318033 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4146 20.65 280.0 183750.0 25 0 12227.0 + 30041 QTSRDTTMY 9 85 551.7449899674252 1101.4754270016504 2 551.7456542849541 MULTI CID FTMS 0 0 0 4144 131652.34375 0.3533987220058678 -6 0.0986824035644531 2 Unmodified _QTSRDTTMY_ ENSG00000165688|ENST00000371717|PMPCA 47.74868867922204 0.0453060283459952 2 MT[HN]QQY 7 7 31.343 0.0 0.0 2.8455 0.0 0.0 181.0829842299691 0.0 181.0829842299691 0.0 5.936588228698692 0.0 0.0 0 0.5 0.0 0.3807196863200844 1.305462187404089 MT[HN]QQY 2.8455 - 76 + 1 2.13 42666.7 1.0 1034 3110 4144 DOHH2_400M_050219_2,4146 DOHH2_400M_050219_2,4146,QTSRDTTMY True True QTSRDTTMY 20.650003 551.745654284954 1889044.875 4144.0 ENSG00000165688|ENST00000371717|PMPCA 5.289810657501221 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4147 20.655 244.0 369940.0 25 0 58375.0 + 8352 ESALRKQSL 9 94 516.2972590916767 0 516.2963744997978 PEAK CID FTMS 0 0 0 4144 252585.1875 0.9726562182703472 -3 0.0479640960693359 3 Unmodified _ESALRKQSL_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 53.40400417844725 0.023745606374537 2 SA{I|L} 3 6 14.667 0.0 0.0 1.4232 0.0 0.0 129.0432521648308 627.3604830377561 756.4037352025869 0.0 0.0 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.0 + SA{I|L} 1.4232 + + 25 + 1 2.13 76614.0 1.0 1035 3110 4144 DOHH2_400M_050219_2,4147 DOHH2_400M_050219_2,4147,ESALRKQSL True True ESALRKQSL 20.654589 516.296374499798 1357681.0 4144.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 2.505565047264099 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4148 20.661 357.0 239660.0 25 0 57721.0 -1 LSELHAFLAC 10 77 580.7942264048804 1159.5738998765607 2 580.7936889529228 MULTI CID FTMS 0 0 0 4144 85078.09375 0.1788040099137254 -8 0.1464347839355468 4 Carbamidomethyl (C) _LSELHAFLAC(Carbamidomethyl (C))_ ENST00000519067.5_1_8:142220968-142221217:-|nuORF 10.823927491677226 0.6659270209832991 2 [EP][YR]ER 6 -1 25.379 0.0 0.0 2.1887 0.0 0.0 0.0 326.1366107306156 326.1366107306156 14.921525057367402 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 [EP][YR]ER 2.1887 - 34 1 2.13 70977.8 1.0 1036 3110 4144 DOHH2_400M_050219_2,4148 DOHH2_400M_050219_2,4148,LSELHAFLAC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4150 20.666 56.0 1127000.0 25 0 137520.0 + + 4761 DELESTNRRY 10 63 428.2056964189842 1281.5952598571523 3 428.2055847048759 MULTI CID FTMS 0 0 0 4149 628626.875 0.208724578343576 8 -0.139902114868164 1 Unmodified _DEIEWHIVQN_ ENSG00000047315|ENST00000314595|POLR2B 17.11289562659939 0.5604042439455784 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E 4 -1 23.812 0.0 0.0 1.858 0.0 0.0 0.0 792.3758269948246 792.3758269948246 11.606056125004828 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E 1.858 + + 34 + 1 2.13 59027.5 1.0 1037 3111 4149 DOHH2_400M_050219_2,4150 DOHH2_400M_050219_2,4150,DEIEWHIVQN False False DELESTNRRY 20.665745 428.205584704876 13188936.0 4149.0 ENSG00000047315|ENST00000314595|POLR2B 3.9142799774805694 3.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4151 20.669 143.0 421710.0 25 0 107350.0 + 4776 DELESTNRRY 10 38 641.8044549581358 1281.5943569830715 2 641.8046752810478 MULTI CID FTMS 0 0 0 4149 363414.6875 0.1939003943678053 9 -0.183837890625 2 Unmodified _DELESTNRRY_ ENSG00000047315|ENST00000314595|POLR2B 14.218169984304629 0.6089749286722269 2 DE 2 8 39.949 0.0 0.0 3.1171 0.0 0.0 0.0 1034.5047385283076 1034.5047385283076 23.750612633917 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + DE 3.1171 + + 14 + 1 2.13 50073.9 1.0 1038 3111 4149 DOHH2_400M_050219_2,4151 DOHH2_400M_050219_2,4151,DELESTNRRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4152 20.671 84.0 1029600.0 25 0 156600.0 + 33837 SLEDSQLQQL 10 88 387.5314258041632 1159.5724480126896 3 387.5316650271416 MULTI CID FTMS 0 0 0 4149 322034.09375 0.2707527738186245 -8 0.1662559509277343 3 Unmodified _SLEDSQLQQL_ REV__ENSG00000101751|ENST00000579534|POLI 17.11289562659939 0.5604042439455784 2 VTERQ{[RE]|[WV]}{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 + 54.447 0.0 0.0 4.6954 4.6954 79.07 0.0 0.0 0.0 40.95229386281659 0.915149811213496 0.915149811213496 6.778259348524358 0 0.3807196863200844 1.3979400086720375 0.0 0.3807196863200844 VTERQ{[RE]|[WV]}{[QD]|[EN]|[WG]|[KD]|[RS]};VTEGVQ{[RE]|[WV]}{[QD]|[EN]|[WG]|[KD]|[RS]};VTEGVQA[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]};VTER[AG]{[RE]|[WV]}{[QD]|[EN]|[WG]|[KD]|[RS]};VTER[C(Carbamidomethyl (C))Q][{I|L}A][PS];VWTVQ{[RE]|[WV]}{[QD]|[EN]|[WG]|[KD]|[RS]} 4.6954;4.1109;4.0069;3.9013;3.1225;2.3113 -;-;-;-;-;- 273 + 1 2.13 78504.4 1.0 1039 3111 4149 DOHH2_400M_050219_2,4152 DOHH2_400M_050219_2,4152,SLEDSQLQQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4153 20.684 800.0 100610.0 25 0 13613.0 -1 LSDTTNCMEM 10 95 617.2230049828319 1232.4314570324636 2 617.2233764529228 MULTI CID FTMS 0 0 0 4149 102493.078125 0.3090893095656502 -8 0.1662559509277343 4 Carbamidomethyl (C),2 Oxidation (M) _LSDTTNC(Carbamidomethyl (C))M(Oxidation (M))EM(Oxidation (M))_ ENSG00000174672|ENST00000528841|BRSK2;ENST00000531932.1_1_11:1475661-1480576:+|nuORF;nc|ENSG00000174672|Q8IWQ3-3|BRSK2;nc|ENSG00000174672|Q8IWQ3-5|BRSK2 22.736283301280096 0.4578556481593033 2 {[TV]|[{I|L}S]}D 3 -1 36.8 0.0 0.0 2.986 0.0 0.0 0.0 914.2654468608416 914.2654468608416 13.767390519135873 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.7887254899964358 0.0 {[TV]|[{I|L}S]}D 2.986 + + 109 1 2.13 69577.5 0.550000011920929 1040 3111 4149 DOHH2_400M_050219_2,4153 DOHH2_400M_050219_2,4153,LSDTTNCMEM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4155 20.69 133.0 450700.0 25 0 33540.0 + 6198 DTERESAVY 9 90 535.2434583503513 1068.4723637675024 2 535.2432739138603 MULTI CID FTMS 0 0 0 4154 268583.71875 0.3169335571827017 6 -0.1126594543457031 1 Unmodified _DTERESAVY_ ENST00000397532.7_1_14:23284899-23285010:-|nuORF 13.90604991867851 0.4602628045680013 2 PHKG[RV]VY 8 7 39.602 0.0 0.0 3.7064 0.0 0.0 113.93343296280143 0.0 113.93343296280143 0.0 27.61230030668848 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 PHKG[RV]VY 3.7064 - 38 + 1 2.13 52642.7 1.0 1041 3112 4154 DOHH2_400M_050219_2,4155 DOHH2_400M_050219_2,4155,DTERESAVY False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4156 20.698 468.0 122560.0 25 0 8950.8 + 7078 EELNSTQRV 9 98 538.2719828420992 1074.5294127509983 2 538.2726928591728 MULTI CID FTMS 0 0 0 4154 87008.953125 0.72876493074959 -4 0.0909252166748046 2 Unmodified _EELNSTQRV_ ENSG00000119285|ENST00000366582|HEATR1 38.17557092003332 0.0854718145212029 2 EE{I|L}NSTQRV 9 0 + 60.155 0.0 0.0 5.5983 5.5983 83.122 0.0 0.0 0.0 46.96735703414788 4.683065105678033 4.683065105678033 7.459665670122426 0 0.4247425010840047 1.5228787452803376 0.0 0.8494850021680094 + + EE{I|L}NSTQRV;EE{I|L}NST[R{I|L}]N;EE{I|L}GGSTQRV;EE{I|L}NST[AG]RV;EE{I|L}GGST[R{I|L}]N;EE{I|L}GGST[AG]RV;EE{I|L}N[C(Carbamidomethyl (C))R]RV;EE{I|L}GG[C(Carbamidomethyl (C))R]RV;EE{I|L}[{I|L}P]A{M(Oxidation (M))|F}AW 5.5983;4.904;4.7413;4.7413;4.0471;3.8884;3.8107;2.9487;2.1005 +;-;-;-;-;-;-;-;- + 123 + 1 2.13 50125.3 1.0 1042 3112 4154 DOHH2_400M_050219_2,4156 DOHH2_400M_050219_2,4156,EELNSTQRV True True EELNSTQRV 20.697816 538.272692859173 561395.3125 4154.0 ENSG00000119285|ENST00000366582|HEATR1 6.431985696156819 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4157 20.701 163.0 449340.0 25 0 152190.0 -1 0 61 434.2201181369816 433.2128416703816 1 434.2204467654228 MULTI CID FTMS 0 0 0 4154 209849.53125 0.200838017281224 11 -0.2597026824951172 3 2 {I|L} 1 -1 13.979 0.0 0.0 3.2269 0.0 0.0 302.1179758029972 0.0 302.1179758029972 0.0 12.559416804894372 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.2269 - 7 + 1 2.13 62939.1 1.0 1043 3112 4154 DOHH2_400M_050219_2,4157 DOHH2_400M_050219_2,4157, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4158 20.713 682.0 269270.0 25 0 79723.0 33570 SILWQLVK 8 133 493.8031252810785 985.591697628957 2 494.3135864138603 MULTI CID FTMS 0 0 0 -1 0 4 Unmodified _SILWQLVK_ ENSG00000118007|ENST00000383202|STAG1;nc|ENSG00000118007|Q8WVM7-2|STAG1 34.10243960390752 0.3329570729325616 2 VT[HK]TVK 7 6 44.569 0.0 0.0 4.5221 0.0 0.0 174.0968291801591 0.0 174.0968291801591 0.0 32.42947589513584 0.0 0.0 0 1.3494850021680094 0.0 0.3054621874040891 0.805462187404089 VT[HK]TVK 4.5221 - 402 + 1 2.13 142407.7 1.0 1044 3112 4154 DOHH2_400M_050219_2,4158 DOHH2_400M_050219_2,4158,SILWQLVK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4160 20.725 551.0 175510.0 25 0 38473.0 + 31831 RTDIARTEY 9 95 562.7881827474985 1123.5618125617968 2 562.7883788943291 MULTI CID FTMS 0 0 0 4159 155189.65625 0.1994651948915769 5 -0.0840530395507812 1 Unmodified _RTDIARTEY_ ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000556791.1_1_14:102499420-102503925:+|nuORF 30.7034409873982 0.1405282614900322 2 [VG]TD{I|L} 5 7 45.304 0.0 0.0 4.0322 0.0 0.0 0.0 635.2746676080686 635.2746676080686 25.611206103324733 0.0 0.0 0.0 0 1.086696871556164 1.6989700043360187 0.0 0.0 [VG]TD{I|L} 4.0322 - 148 + 1 2.13 77206.7 1.0 1045 3113 4159 DOHH2_400M_050219_2,4160 DOHH2_400M_050219_2,4160,RTDIARTEY False True RTDIARTEY 20.72509 562.788378894329 6609876.5 4159.0 ENSG00000197102|ENST00000360184|DYNC1H1;;ENST00000556791.1_1_14:102499420-102503925:+|nuORF 8.546162128448486 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4161 20.728 172.0 616020.0 25 0 53024.0 + 5190 DIRAKEKEL 9 117 367.8807683770406 1100.620475731322 3 367.8804504275322 MULTI CID FTMS 0 0 0 4159 354582.15625 0.2593369141449954 -8 0.1575984954833984 2 Unmodified _DIRAKEKEL_ ENSG00000124541|ENST00000244496|RRP36;nc|ENSG00000124541|Q96EU6-2|RRP36 61.08992128646608 0.0254786290039527 2 {NN|[MP]|[D{I|L}]|[EV]}RAKEKE{I|L} 9 0 + 59.567 0.0 0.0 5.4121 5.4121 86.831 0.0 0.0 0.0 8.126459441579073 27.39963434401865 8.126459441579073 11.63811573052314 0 0.9247425010840048 2.0 0.7059771852360797 0.5 + + {NN|[MP]|[D{I|L}]|[EV]}RAKEKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}RAKE{I|L}GS{I|L};{NN|[MP]|[D{I|L}]|[EV]}RAK[W{I|L}]S{I|L};{[TV]|[{I|L}S]}{I|L}[RN]EKE{I|L};{[QN]|[E{I|L}]|[KN]}VNKEKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}RAK[RP][{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}{I|L}W{[NV]|[RG]}KE{I|L};{[TV]|[{I|L}S]}{I|L}[RN]E{I|L}GS{I|L};{[TV]|[{I|L}S]}G{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}KE{I|L};{[QN]|[E{I|L}]|[KN]}VNKE{I|L}GS{I|L} 5.4121;4.3547;3.7584;3.0318;2.9326;2.6174;2.2124;1.9744;1.8752;1.8752 +;-;-;-;-;-;-;-;-;- + 451 1 2.13 90332.0 1.0 1046 3113 4159 DOHH2_400M_050219_2,4161 DOHH2_400M_050219_2,4161,DIRAKEKEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4162 20.734 308.0 283430.0 25 0 55866.0 -1 KPPLLMSPV 9 90 499.2931132986277 996.5716736640552 2 499.2937499880791 MULTI CID FTMS 0 0 0 4159 158572.96875 0.0736912462205595 -10 0.2181720733642578 3 Oxidation (M) _KPPLLM(Oxidation (M))SPV_ ENST00000564508.2_1_16:72461754-72462081:+|nuORF 16.942295170755138 0.3780752226737986 2 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3522354682673 667.3522354682673 28.272754322738027 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 - 45 + 1 2.13 74321.6 1.0 1047 3113 4159 DOHH2_400M_050219_2,4162 DOHH2_400M_050219_2,4162,KPPLLMSPV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4164 20.741 269.0 278290.0 25 0 29422.0 + -1 NEGTGKSSW 9 95 483.21967917912497 964.42480542505 2 483.2199279665947 MULTI CID FTMS 0 0 0 4163 233255.4375 0.2757415590472154 -8 0.1747283935546875 1 Carbamidomethyl (C) _NEKQSC(Carbamidomethyl (C))TV_ ENSG00000204060|ENST00000641094|FOXO6;nc|ENSG00000118689|O43524-2|FOXO3;ENSG00000150907|ENST00000379561|FOXO1;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;ENSG00000118689|ENST00000406360|FOXO3 20.453626601364224 0.6087503291685402 2 {[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F}S[KS]Q 8 -1 24.461 0.0 0.0 2.5363 0.0 0.0 0.0 84.00985895328358 84.00985895328358 10.965781442533356 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.5554621874040891 0.3054621874040891 {[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F}S[KS]Q 2.5363 - 226 + 1 2.13 62523.9 1.0 1048 3114 4163 DOHH2_400M_050219_2,4164 DOHH2_400M_050219_2,4164,NEKQSCTV False False NEGTGKSSW 20.741461 483.219927966595 9616300.0 4163.0 ENSG00000204060|ENST00000641094|FOXO6;;nc|ENSG00000118689|O43524-2|FOXO3;;ENSG00000150907|ENST00000379561|FOXO1;;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;;ENSG00000118689|ENST00000406360|FOXO3 4.474461555480957 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4165 20.745 191.0 483020.0 25 0 86596.0 + 18383 KVRDLEVK 8 82 493.8031252810785 985.591697628957 2 493.8036376833916 MULTI CID FTMS 0 0 0 4163 374062.3125 0.6166175261230635 -7 0.1445560455322265 2 Unmodified _KVRDLEVK_ REV__ENSG00000155363|ENST00000369645|MOV10;REV__ENST00000468624.5_1_1:113217534-113241292:+|nuORF;REV__ENST00000496577.5_1_1:113231344-113241292:+|nuORF;REV__nc|ENSG00000155363|Q9HCE1-2|MOV10 30.63653989081413 0.3996269429323407 2 {M(Oxidation (M))|F}TVK 4 -1 53.047 0.0 0.0 5.3823 0.0 0.0 492.2954884259781 0.0 492.2954884259781 0.0 28.622731327798547 0.0 0.0 0 1.924742501084005 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}TVK 5.3823 - 125 1 2.13 72933.9 1.0 1049 3114 4163 DOHH2_400M_050219_2,4165 DOHH2_400M_050219_2,4165,KVRDLEVK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4169 20.769 800.0 144870.0 25 0 11918.0 + 6026 DSDLRNDSY 9 138 542.73049474892 1083.44643656464 2 542.7308227419853 MULTI CID FTMS 0 0 0 4168 77682.0234375 0.5739566142715392 3 -0.0918045043945312 1 Unmodified _DSDLRNDSY_ ENSG00000078403|ENST00000307729|MLLT10;nc|ENSG00000078403|P55197-1|MLLT10 125.52916310638032 0.0024920486013546 2 {[DS]|[MA]|[CV]|TT}D{I|L}RNDSY 9 0 + 57.537 0.0 0.0 5.3106 5.3106 80.803 0.0 0.0 0.0 3.1234684152074976 42.8442464452373 3.1234684152074976 6.298545532927079 0 2.167735320183944 0.0 1.8996498648046136 0.3252574989159953 + + {[DS]|[MA]|[CV]|TT}D{I|L}RNDSY;{[DS]|[MA]|[CV]|TT}D{I|L}[HT]{M(Oxidation (M))|F}SY;{[DS]|[MA]|[CV]|TT}D{I|L}RGGDSY;[VS]GE{[NV]|[RG]}DDSY;{[DS]|[MA]|[CV]|TT}{[VA]|[{I|L}G]}{[NV]|[RG]}DDSY;WW{[NV]|[RG]}DDSY;[AG]D[RV]SDDSY;{[DS]|[MA]|[CV]|TT}{[NV]|[RG]}{[VA]|[{I|L}G]}DDSY;[HM]D{[RE]|[WV]}{M(Oxidation (M))|F}SY;[AG]D[RV]DSDSY 5.3106;4.7292;4.4607;3.9778;3.8233;3.6905;3.6714;3.599;3.558;3.5483 +;-;-;-;-;-;-;-;-;- + 1271 1 2.13 92422.7 0.7799999713897705 1050 3117 4168 DOHH2_400M_050219_2,4169 DOHH2_400M_050219_2,4169,DSDLRNDSY True True DSDLRNDSY 20.769361 542.730822741985 651060.5625 4168.0 ENSG00000078403|ENST00000307729|MLLT10;;nc|ENSG00000078403|P55197-1|MLLT10 7.340733846028645 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4170 20.783 800.0 122650.0 25 0 15412.0 -1 QTSRDTTMY 9 128 559.7434150505396 1117.4722771678792 2 559.7429687380791 MULTI CID FTMS 0 0 0 4168 98024.375 0.7302208194108495 1 -0.0439357757568359 2 Oxidation (M) _QTSRDTTM(Oxidation (M))Y_ ENSG00000165688|ENST00000371717|PMPCA 25.399314129420983 0.2080152500878129 2 V{M(Oxidation (M))|F}TM[{I|L}V]{M(Oxidation (M))|F}Y 8 -1 29.123 0.0 0.0 2.6061 0.0 0.0 99.03824688682715 0.0 99.03824688682715 0.0 11.842378559560988 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 V{M(Oxidation (M))|F}TM[{I|L}V]{M(Oxidation (M))|F}Y 2.6061 - 939 + 1 2.13 79964.6 0.7099999785423279 1051 3117 4168 DOHH2_400M_050219_2,4170 DOHH2_400M_050219_2,4170,QTSRDTTMY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4171 20.797 800.0 174340.0 25 0 16096.0 + 16614 KEFKERDE 8 125 540.7699808593555 1079.525408785511 2 540.7701293826103 MULTI CID FTMS 0 0 0 4168 97255.046875 0.3976338309545962 -3 0.0190334320068359 3 Unmodified _KEFKERDE_ REV__ENSG00000129484|ENST00000429687|PARP2;REV__nc|ENSG00000129484|Q9UGN5|PARP2 36.12702656103203 0.299085846329477 2 KEAEH 5 -1 52.123 0.0 0.0 4.8283 0.0 0.0 0.0 482.2309664361938 482.2309664361938 27.271212547196622 0.0 0.0 0.0 0 1.075257498915995 0.0 0.7302046884880937 0.0 KEAEH 4.8283 - 332 + 1 2.13 107255.0 0.699999988079071 1052 3117 4168 DOHH2_400M_050219_2,4171 DOHH2_400M_050219_2,4171,KEFKERDE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4174 20.814 628.0 505070.0 25 0 51715.0 + 5191 DIRAKEKEL 9 165 551.3167232931075 1100.618893653015 2 551.3172485232353 MULTI CID FTMS 0 0 0 4173 389690.84375 0.9801589085698008 -1 0.0039329528808593 1 Unmodified _DIRAKEKEL_ ENSG00000124541|ENST00000244496|RRP36;nc|ENSG00000124541|Q96EU6-2|RRP36 88.36371040165146 0.0154903161960565 2 {NN|[MP]|[D{I|L}]|[EV]}RAKEKE{I|L} 9 0 + 69.969 0.0 0.0 6.3573 6.3573 90.445 0.0 0.0 0.0 12.081703939472078 14.09256854528806 12.081703939472078 12.081703939472078 0 1.6549471895720984 1.3010299956639813 0.9650302283996908 0.25 + + {NN|[MP]|[D{I|L}]|[EV]}RAKEKE{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}KEKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}RAKTRE{I|L};[VG][W{I|L}]KEKE{I|L};[QT][RV]VEKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}RAKT[VG]E{I|L};[QT][RV]{I|L}DKE{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}KTRE{I|L};{NN|[MP]|[D{I|L}]|[EV]}RAKT{[VA]|[{I|L}G]}D{I|L};[QT][RV]{I|L}KDE{I|L} 6.3573;5.2596;5.0628;4.5895;4.4487;4.2261;4.1437;3.965;3.883;3.617 +;-;-;-;-;-;-;-;-;- + 1705 1 2.128 236814.9 1.0 1053 3119 4173 DOHH2_400M_050219_2,4174 DOHH2_400M_050219_2,4174,DIRAKEKEL True True DIRAKEKEL 20.814359 551.317248523235 8369112.75 4173.0 nc|ENSG00000124541|Q96EU6-2|RRP36;;ENSG00000124541|ENST00000244496|RRP36 5.254021326700847 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4175 20.817 143.0 453990.0 25 0 47469.0 + 531 AEIDDRKQL 9 90 544.2918770407654 1086.5692011483306 2 544.2923461794853 MULTI CID FTMS 0 0 0 4173 295742.25 0.5521360418579562 -3 0.0518913269042968 2 Unmodified _AEIDDRKQL_ ENSG00000141425|ENST00000399022|RPRD1A;nc|ENSG00000141425|Q96P16-3|RPRD1A 76.82478488871298 0.0184607444814265 2 AE{I|L}DD[RK]Q{I|L} 9 0 + 84.562 0.0 0.0 7.7825 7.7825 94.236 0.0 0.0 0.0 47.12842667664825 19.084716816113485 19.084716816113485 13.015384402724578 0 1.805462187404089 2.0 0.8494850021680094 0.7614393726401688 + + AE{I|L}DD[RK]Q{I|L};AE{I|L}DD[RK][AG]{I|L};AE{I|L}[QT]{[RE]|[WV]}Q{I|L};{I|L}EADD[RK]Q{I|L};AE[WR]{[RE]|[WV]}Q{I|L};[Q{I|L}][R{M(Oxidation (M))|F}][WP]Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WP]{[RE]|[WV]}Q{I|L} 7.7825;6.5846;6.5376;5.4593;5.2001;2.1038;1.2229 +;-;-;-;-;-;- + 132 + 1 2.128 52873.2 1.0 1054 3119 4173 DOHH2_400M_050219_2,4175 DOHH2_400M_050219_2,4175,AEIDDRKQL True True AEIDDRKQL 20.81724 544.292346179485 2453341.75 4173.0 ENSG00000141425|ENST00000399022|RPRD1A;;nc|ENSG00000141425|Q96P16-3|RPRD1A 5.07113782564799 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4176 20.831 800.0 205310.0 25 0 15947.0 + 2595 ASNDYTQQATQ 11 132 634.7730450207366 1267.5315371082731 2 634.7730590701103 MULTI CID FTMS 0 0 0 4173 196324.265625 0.5861551673031229 -1 0.0039329528808593 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNDYTQQATQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 101.5434397834973 0.0014376440060606 2 [DN]{[CP]|[EA]}YTQQATQ 11 4 + 48.799 0.0 0.0 3.85 3.85 70.718 0.0 0.0 0.0 0.9376360264396766 4.002754453825759 0.9376360264396766 2.341984848702566 0 1.3812033112643842 1.6989700043360187 0.8639829889124311 0.566901560044258 [DN]{[CP]|[EA]}YTQQATQ;[DN]SY[DV]QQATQ;{[CP]|[EA]}NDYTQQATQ;[QA]DDYTQQATQ;[AG]ADDYTQQATQ;[AG]TQA[C(Carbamidomethyl (C))S]HHATQ;[DN]KA[C(Carbamidomethyl (C))S]HHATQ;[NS]VGA[C(Carbamidomethyl (C))S]HHATQ;[NS]DY[DV]QQATQ;[QT]AGA[C(Carbamidomethyl (C))S]HHATQ 3.85;3.6652;3.5461;3.5222;3.3928;3.2194;3.199;3.1477;3.1406;3.0848 -;-;-;-;-;-;-;-;-;- 3471 1 2.128 122919.9 0.8899999856948853 1055 3119 4173 DOHH2_400M_050219_2,4176 DOHH2_400M_050219_2,4176,ASNDYTQQATQ True False ASNDYTQQATQ 20.831077 634.77305907011 1913637.5 4173.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 9.037296613057457 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4177 20.845 800.0 169340.0 25 0 15522.0 + 16677 KENPNQYNY 9 126 585.264396475311 1168.5142400174218 2 585.2642700076103 MULTI CID FTMS 0 0 0 4173 147414.328125 0.8193185491231584 5 -0.1550865173339843 4 Unmodified _KENPNQYNY_ ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620-3|CUL4B;nc|ENSG00000158290|Q13620|CUL4B 62.57269311338072 0.0246576765497938 2 {[QD]|[EN]|[WG]|[KD]|[RS]}Q[NP]QYNY 9 2 + 50.499 0.0 0.0 4.3216 4.3216 80.733 0.0 0.0 0.0 6.411962188136542 41.10144779148988 6.411962188136542 9.208187539523747 0 0.75 0.0 0.6861818737241735 1.5044321917401078 {[QD]|[EN]|[WG]|[KD]|[RS]}Q[NP]QYNY;{[QD]|[EN]|[WG]|[KD]|[RS]}[AG][NP]QYNY;{[QD]|[EN]|[WG]|[KD]|[RS]}Q[NP]QYGGY;{[QD]|[EN]|[WG]|[KD]|[RS]}Q[NP][AG]YNY;{[QD]|[EN]|[WG]|[KD]|[RS]}QMD[KQ]NY;{[QD]|[EN]|[WG]|[KD]|[RS]}QMN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NY;[NP]AA[QT]QYNY;{[QD]|[EN]|[WG]|[KD]|[RS]}[KC][HV]YNY;{[QD]|[EN]|[WG]|[KD]|[RS]}NG[PA]QYNY;{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}K[C(Carbamidomethyl (C))Q]NY 4.3216;3.5336;3.5336;3.5336;2.9664;2.7765;2.6617;2.5417;2.537;2.3553 -;-;-;-;-;-;-;-;-;- 763 1 2.128 102678.7 0.8100000023841858 1056 3119 4173 DOHH2_400M_050219_2,4177 DOHH2_400M_050219_2,4177,KENPNQYNY True True KENPNQYNY 20.844909 585.26427000761 834786.3125 4173.0 nc|ENSG00000158290|Q13620-3|CUL4B;;nc|ENSG00000158290|Q13620|CUL4B;;ENSG00000158290|ENST00000371322|CUL4B 7.03673267364502 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4179 20.852 277.0 234780.0 25 0 28196.0 + 20663 LLQPRGASA 9 76 456.7666914248385 911.518829916477 2 456.7665283083916 MULTI CID FTMS 0 0 0 4178 201089.171875 0.4437315271428514 4 -0.1111507415771484 1 Unmodified _LLQPRGASA_ ENSG00000131650|ENST00000303746|KREMEN2;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;nc|ENSG00000131650|Q8NCW0-3|KREMEN2;nc|ENSG00000131650|Q8NCW0-4|KREMEN2;nc|ENSG00000131650|Q8NCW0-5|KREMEN2;nc|ENSG00000131650|Q8NCW0-6|KREMEN2 32.30548876998284 0.1201446275138228 2 {I|L}{I|L}QT 4 6 40.93 0.0 0.0 4.4903 0.0 0.0 0.0 453.2224667984169 453.2224667984169 29.670802793795268 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {I|L}{I|L}QT 4.4903 - 67 1 2.128 53966.1 1.0 1057 3120 4178 DOHH2_400M_050219_2,4179 DOHH2_400M_050219_2,4179,LLQPRGASA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4180 20.866 800.0 200540.0 25 0 52687.0 + -1 EAVMCPWCM 9 134 571.7103198852521 1141.4060868373042 2 571.7106201052666 MULTI CID FTMS 0 0 0 4178 140897.25 1.0 0 0.0 2 Carbamidomethyl (C),Oxidation (M) _EAVM(Oxidation (M))C(Carbamidomethyl (C))PWCM_ REV__ENSG00000204480|ENST00000376101|PRAMEF19 4.3292370932331545 0.7635526921153418 2 C{M(Oxidation (M))|F}NRY 5 -1 34.513 0.0 0.0 3.0238 0.0 0.0 440.1089199445292 0.0 440.1089199445292 0.0 15.332144135156296 0.0 0.0 0 1.1861818737241734 0.0 0.0 0.5 C{M(Oxidation (M))|F}NRY 3.0238 - 664 + 1 2.128 123014.6 0.6399999856948853 1058 3120 4178 DOHH2_400M_050219_2,4180 DOHH2_400M_050219_2,4180,EAVMCPWCM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4182 20.874 284.0 250920.0 25 0 31229.0 17463 KPEGTPQRI 9 82 513.2899443705112 1024.5653358078223 2 513.2900878787041 MULTI CID FTMS 0 0 0 4181 186096.375 0.3706977722218508 7 -0.1730995178222656 1 Unmodified _KPEGTPQRI_ ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 18.1463463914782 0.3454829746528889 2 KPT 3 6 43.94 0.0 0.0 4.2887 0.0 0.0 0.0 695.3492142820363 695.3492142820363 27.998037644757048 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 KPT 4.2887 - 122 + 1 2.128 61951.3 1.0 1059 3121 4181 DOHH2_400M_050219_2,4182 DOHH2_400M_050219_2,4182,KPEGTPQRI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4183 20.886 675.0 159680.0 25 0 8603.7 + 42171 VSDNDIRKY 9 133 555.2833266938974 0 555.2820312380791 PEAK CID FTMS 0 0 0 4181 132702.09375 1.0 0 0.0 2 Unmodified _VSDNDIRKY_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35057116-35062147:-|nuORF 47.594388314883695 0.0382481814706656 2 SDND{I|L}RK 7 2 34.506 0.0 0.0 3.1127 0.0 0.0 99.06806714718772 178.0513094537719 277.11937660095964 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.805462187404089 + SDND{I|L}RK 3.1127 + + 695 + 1 2.128 87366.2 1.0 1060 3121 4181 DOHH2_400M_050219_2,4183 DOHH2_400M_050219_2,4183,VSDNDIRKY True True VSDNDIRKY 20.885615 555.282031238079 646636.25 4181.0 ENSG00000165280|ENST00000358901|VCP;;ENST00000493886.5_1_9:35057116-35062147:-|nuORF 6.980526606241862 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4184 20.892 365.0 293950.0 25 0 23391.0 + -1 LTEQCALTLM 10 124 380.189203671132 1137.545781613596 3 380.1891357302666 MULTI CID FTMS 0 0 0 4181 125666.71875 0.2188843044886976 -7 0.1321315765380859 3 Oxidation (M) _LTEQCALTLM(Oxidation (M))_ REV__ENST00000381341.6_1_2:15771139-15771202:+|nuORF 8.97624648632007 0.6851160995914376 2 Y 1 -1 14.604 0.0 0.0 1.2838 0.0 0.0 956.471515111446 0.0 956.471515111446 0.0 -3.979400086720375 -3.979400086720375 0.0 0 0.0 0.0 0.0 0.0 Y 1.2838 - 164 + 1 2.128 87655.9 1.0 1061 3121 4181 DOHH2_400M_050219_2,4184 DOHH2_400M_050219_2,4184,LTEQCALTLM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4186 20.908 800.0 196800.0 25 0 35613.0 + -1 MYFYRREAREK 11 114 522.2607330566723 1563.7603697702166 3 522.2580444216728 MULTI CID FTMS 0 0 0 4185 91451.1640625 0.3920600871593783 22 -0.5673675537109375 1 Oxidation (M) _M(Oxidation (M))YFYRREAREK_ REV__ENST00000531768.1_1_11:77402049-77404650:-|nuORF 2.434785330301024 0.8636604596255422 2 {I|L}EK 3 -1 22.51 0.0 0.0 1.4395 0.0 0.0 1175.527961178223 0.0 1175.527961178223 0.0 10.158963840444546 0.0 0.0 0 0.0 0.0 0.75 0.3494850021680094 {I|L}EK 1.4395 - 250 + 1 2.128 121467.4 0.5199999809265137 1062 3122 4185 DOHH2_400M_050219_2,4186 DOHH2_400M_050219_2,4186,MYFYRREAREK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4187 20.917 466.0 133420.0 25 0 12572.0 + 6825 EEAQYQREY 9 87 608.2677890588866 1214.521025184573 2 608.2670165896416 MULTI CID FTMS 0 0 0 4185 172243.09375 1.0 0 0.0 2 Unmodified _EEAQYQREY_ ENSG00000126581|ENST00000590099|BECN1;ENST00000589493.1_1_17:40967924-40970674:-|nuORF 92.65332237495696 0.0139087009896299 2 EEAQYQ{[RE]|[WV]}Y 9 0 + 78.522 0.0 0.0 6.4653 6.4653 88.916 0.0 0.0 0.0 46.412995189136375 11.7074145675533 11.7074145675533 9.208187539523747 0 0.9604093769761876 1.6989700043360187 0.805462187404089 1.1989700043360187 + + EEAQYQ{[RE]|[WV]}Y;EEAQY[AG]{[RE]|[WV]}Y;EEA[AG]YQ{[RE]|[WV]}Y;EEA[HK]YQA[HC];EEAQY{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{[ET]|[MV]}[HV]QYQA[HC];EEA{[NV]|[RG]}[KS]E{M(Oxidation (M))|F}Y;EEA[HK]Y[AG]A[HC];[Y{M(Oxidation (M))|F}]RQYQA[HC];EEAQY{[VA]|[{I|L}G]}[YE]N 6.4653;5.7071;5.7071;5.3321;4.8838;4.8736;4.6254;4.5775;4.4032;4.3228 +;-;-;-;-;-;-;-;-;- + 458 + 1 2.128 50793.8 1.0 1063 3122 4185 DOHH2_400M_050219_2,4187 DOHH2_400M_050219_2,4187,EEAQYQREY True True EEAQYQREY 20.916606 608.267016589642 693580.875 4185.0 ENSG00000126581|ENST00000590099|BECN1;;ENST00000589493.1_1_17:40967924-40970674:-|nuORF 8.458410580952963 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4188 20.93 800.0 129180.0 25 0 16524.0 + + 44059 YLDEADRDKERY 12 80 524.9140626930792 1571.7203586794376 3 524.9142944216728 MULTI CID FTMS 0 0 0 4185 76712.5234375 0.5055608484143769 -4 0.0950450897216796 3 Unmodified _YIQFWFDFYLM_ ENSG00000140382|ENST00000336216|HMG20A 6.234356020891411 0.8457338374961867 2 Y{I|L}DEW[RD]Y 8 -1 68.053 0.0 0.0 4.3298 0.0 0.0 0.0 428.22785364322505 428.22785364322505 54.07312836760731 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.4247425010840047 Y{I|L}DEW[RD]Y 4.3298 - 107 + 1 2.128 83526.2 0.4699999988079071 1064 3122 4185 DOHH2_400M_050219_2,4188 DOHH2_400M_050219_2,4188,YIQFWFDFYLM False False YLDEADRDKERY 20.93042 524.914294421673 833164.4375 4185.0 ENSG00000140382|ENST00000336216|HMG20A 7.304818789164226 3.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4189 20.944 800.0 225100.0 25 0 42821.0 -1 0 38 848.992258884438 4239.92491208919 5 849.7928344607353 MULTI CID FTMS 0 0 0 4185 74253.96875 0.5740379715727479 -4 0.0950450897216796 4 2 V 1 -1 1.5938 0.0 0.0 0.03759 0.0 0.0 3394.7409043761027 743.1060274713499 4137.846931847453 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.03759 - 1 + 1 2.128 130318.9 0.4199999868869781 1065 3122 4185 DOHH2_400M_050219_2,4189 DOHH2_400M_050219_2,4189, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4191 20.949 73.0 1105800.0 25 0 293860.0 42686 VTWEVLEGEV 10 74 387.5314258041632 1159.5724480126896 3 387.5315429568291 MULTI CID FTMS 0 0 0 4190 331044.53125 0.2783283721598928 4 -0.0697803497314453 1 Unmodified _VTWEVLEGEV_ ENSG00000138385|ENST00000260956|SSB;ENST00000438469.2_1_1:146553889-146554591:-|nuORF 9.38312468134398 0.6832340498775793 2 VTE 3 7 33.553 0.0 0.0 2.8936 0.0 0.0 0.0 827.3919734640582 827.3919734640582 20.239060416967085 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 VTE 2.8936 - 35 + 1 2.128 74153.2 1.0 1066 3123 4190 DOHH2_400M_050219_2,4191 DOHH2_400M_050219_2,4191,VTWEVLEGEV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4192 20.956 419.0 234570.0 25 0 50150.0 + 38994 TVREEGAGRW 10 93 580.7942264048804 1159.5738998765607 2 580.7939941287041 MULTI CID FTMS 0 0 0 4190 154529.78125 0.324766850322041 5 -0.0952186584472656 2 Unmodified _TVREEGAGRW_ REV__ENST00000529313.5_1_11:17298611-17304373:+|nuORF 12.240655878213236 0.6421556946785427 2 [EP][YR]ERM 7 -1 25.334 0.0 0.0 2.1848 0.0 0.0 0.0 195.0950540115795 195.0950540115795 9.77915247121121 0.0 0.0 0.0 0 0.6237125054200234 1.6989700043360187 0.0 0.4247425010840047 [EP][YR]ERM 2.1848 - 83 1 2.128 79833.9 1.0 1067 3123 4190 DOHH2_400M_050219_2,4192 DOHH2_400M_050219_2,4192,TVREEGAGRW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4194 20.961 19.0 3593800.0 25 0 390260.0 + 17433 KNDIEIKKL 9 95 367.5608269490381 1099.6606514473142 3 367.5607177615166 MULTI CID FTMS 0 0 0 4193 2494702.75 0.5610512834986964 -3 0.0898571014404296 1 Unmodified _KNDIEIKKL_ REV__ENSG00000145241|ENST00000273853|CENPC;REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF;REV__nc|ENSG00000145241|Q03188-2|CENPC 20.453626601364224 0.2830276176381075 2 {I|L}VKK{I|L} 5 -1 29.763 0.0 0.0 2.7066 0.0 0.0 500.2237750818829 0.0 500.2237750818829 0.0 -6.197336178426518 -6.197336178426518 0.0 0 0.5 0.0 0.0 0.2614393726401688 {I|L}VKK{I|L} 2.7066 - 138 + 1 2.128 60526.2 1.0 1068 3124 4193 DOHH2_400M_050219_2,4194 DOHH2_400M_050219_2,4194,KNDIEIKKL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4195 20.962 66.0 889700.0 25 0 92998.0 + 7149 EENKLVKKI 9 85 550.8372894699737 1099.660026006747 2 550.8373290896416 MULTI CID FTMS 0 0 0 4193 805083.5 0.5533422918521151 -3 0.0898571014404296 2 Unmodified _EENKLVKKI_ ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7 89.40071534611396 0.0152361884002446 2 EENK{I|L}VK{I|L}K 9 2 + 66.046 0.0 0.0 6.006 6.006 87.431 0.0 0.0 0.0 40.308779957331765 15.017346757967545 15.017346757967545 9.208187539523747 0 1.5189301784845295 1.3010299956639813 0.0 0.3054621874040891 EENK{I|L}VK{I|L}K;EEGGK{I|L}VK{I|L}K;KK[TP]EEKK{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}V]EEKK{I|L};KK[RH][YQ]K{I|L} 6.006;5.1687;2.6649;2.1174;0.7669 -;-;-;-;- 171 + 1 2.128 50042.6 1.0 1069 3124 4193 DOHH2_400M_050219_2,4195 DOHH2_400M_050219_2,4195,EENKLVKKI True True EENKLVKKI 20.962347 550.837329089642 5775088.5 4193.0 nc|ENSG00000122545|Q16181-2|SEPTIN7;;ENSG00000122545|ENST00000350320|SEPTIN7;;ENST00000425198.1_1_7:35872473-35938044:+|nuORF 4.517176071802775 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4196 20.966 189.0 318280.0 25 0 40013.0 + -1 EKLNGQLMK 9 90 538.7922145327504 1075.5698761323008 2 538.7924682497978 MULTI CID FTMS 0 0 0 4193 264718.46875 0.6795386063531592 -4 0.1111507415771484 3 Oxidation (M) _EKLNGQLM(Oxidation (M))K_ REV__ENSG00000129596|ENST00000250535|CDO1;REV__ENST00000502631.1_1_5:115145323-115152339:-|nuORF 15.847184025352805 0.4077185912009129 2 KTT 3 -1 34.425 0.0 0.0 3.2006 0.0 0.0 63.99694388673374 678.3580946859116 742.3550385726454 0.0 0.0 0.0 0.0 0 1.0 0.0 1.424742501084005 0.0 KTT 3.2006 - 153 + 1 2.128 48961.2 1.0 1070 3124 4193 DOHH2_400M_050219_2,4196 DOHH2_400M_050219_2,4196,EKLNGQLMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4197 20.969 167.0 301120.0 25 0 41021.0 + 23409 LTEKANHYY 9 80 569.7798641123251 1137.54517529145 2 569.7800170779228 MULTI CID FTMS 0 0 0 4193 231888.640625 0.6841571794614819 -1 0.0119762420654296 4 Unmodified _LTEKANHYY_ ENSG00000127054|ENST00000435064|INTS11;ENST00000470030.6_1_1:1248876-1250311:-|nuORF;ENST00000478641.5_1_1:1248876-1249468:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 43.85829265575387 0.0542763391141878 2 {I|L}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QG]|[NA]}HYY 9 0 + 48.879 0.0 0.0 4.2968 4.2968 73.015 0.0 0.0 0.0 29.35296330774619 7.464169411070927 7.464169411070927 3.0102999566398125 0 0.9247425010840048 2.0 0.0 0.0 + + {I|L}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QG]|[NA]}HYY;{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]}[KA]HYY;{I|L}T{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[R{M(Oxidation (M))|F}][VP];{I|L}{[QC]|[C(Carbamidomethyl (C))A]}RRHYY;{I|L}[PS]C(Carbamidomethyl (C))TT[YT][VP];{I|L}[PS]C(Carbamidomethyl (C))TT[Y{I|L}][PS];[VP]E{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]{M(Oxidation (M))|F}[VP];[VP]WW[HA]{M(Oxidation (M))|F}[VP] 4.2968;4.0322;1.8542;1.7281;1.5381;0.63546;0.12227;0.0050218 +;-;-;-;-;-;-;- + 244 + 1 2.128 42780.9 1.0 1071 3124 4193 DOHH2_400M_050219_2,4197 DOHH2_400M_050219_2,4197,LTEKANHYY True True LTEKANHYY 20.969285 569.780017077923 1465319.125 4193.0 nc|ENSG00000127054|Q5TA45-4|INTS11;;ENSG00000127054|ENST00000435064|INTS11;;nc|ENSG00000127054|Q5TA45-2|INTS11;;nc|ENSG00000127054|Q5TA45-3|INTS11;;nc|ENSG00000127054|Q5TA45-5|INTS11;;ENST00000470030.6_1_1:1248876-1250311:-|nuORF;;ENST00000478641.5_1_1:1248876-1249468:-|nuORF 8.056049346923828 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4198 20.971 57.0 1216000.0 25 0 657040.0 -1 0 52 488.2678344109858 487.2605579443859 1 488.2679015994072 MULTI CID FTMS 0 0 0 4193 1000790.125 0.8392595231066997 -4 0.1111507415771484 5 2 {I|L} 1 -1 10.596 0.0 0.0 2.1746 0.0 0.0 356.16531060727493 0.0 356.16531060727493 0.0 4.653807067949012 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.1746 - 15 + 1 2.128 59753.2 1.0 1072 3124 4193 DOHH2_400M_050219_2,4198 DOHH2_400M_050219_2,4198, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4199 20.975 200.0 353240.0 25 0 29862.0 5934 DQDESYDYLNE 11 92 464.179650735298 1389.517122806094 3 464.1796752810478 MULTI CID FTMS 0 0 0 4193 336686.5 1.0 0 0.0 6 Unmodified _DQDESYDYLNE_ ENSG00000071991|ENST00000262150|CDH19 6.623454094837244 0.8438980474264925 2 {[QD]|[EN]|[WG]|[KD]|[RS]}[YG]MEE{I|L} 8 8 22.159 0.0 0.0 1.5947 0.0 0.0 0.0 421.13517140629045 421.13517140629045 6.674034514292231 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.3807196863200844 {[QD]|[EN]|[WG]|[KD]|[RS]}[YG]MEE{I|L} 1.5947 - 121 1 2.128 59902.1 1.0 1073 3124 4193 DOHH2_400M_050219_2,4199 DOHH2_400M_050219_2,4199,DQDESYDYLNE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4200 20.978 178.0 392300.0 25 0 121180.0 -1 0 76 502.2827975621848 501.2755210955849 1 502.2825195193291 MULTI CID FTMS 0 0 0 4193 271877.75 0.5606353906596769 9 -0.2064056396484375 7 2 T 1 -1 10.713 0.0 0.0 2.1372 0.0 0.0 382.2170245519309 0.0 382.2170245519309 0.0 0.2557626122369054 0.0 0.0 0 0.0 0.0 0.0 0.0 T 2.1372 - 8 + 1 2.128 57803.7 1.0 1074 3124 4193 DOHH2_400M_050219_2,4200 DOHH2_400M_050219_2,4200, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4201 20.992 800.0 223290.0 25 0 42748.0 + -1 GVAVCAPVSLS 11 136 530.2781967236388 0 530.2777587771416 PEAK CID FTMS 0 0 0 4193 125528.03125 0.5114275541492741 1 -0.0356006622314453 8 Carbamidomethyl (C) _GVAVC(Carbamidomethyl (C))APVSLS_ REV__ENST00000464675.2_1_2:73151292-73161080:+|nuORF 9.38312468134398 0.4559597037863106 2 C(Carbamidomethyl (C)) 1 -1 6.9897 0.0 0.0 0.66031 0.0 0.0 695.361494910365 200.1300905817016 895.4915854920665 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.66031 + + 130 + 1 2.128 136987.9 0.6000000238418579 1075 3124 4193 DOHH2_400M_050219_2,4201 DOHH2_400M_050219_2,4201,GVAVCAPVSLS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4203 20.996 30.0 1749000.0 25 0 229400.0 + 17598 KPTAAFHLL 9 63 499.2931132986277 996.5716736640552 2 499.2930480837822 MULTI CID FTMS 0 0 0 4202 1729288.0 0.8036261715902259 2 -0.0222034454345703 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 2 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3521255139108 667.3521255139108 29.096805565967987 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 27 + 1 2.128 45909.0 1.0 1076 3125 4202 DOHH2_400M_050219_2,4203 DOHH2_400M_050219_2,4203,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4204 20.998 80.0 515250.0 25 0 32320.0 + 25445 NEGTGKSSW 9 84 483.21967917912497 964.42480542505 2 483.2195617556572 MULTI CID FTMS 0 0 0 4202 482054.125 0.5698574806970631 3 -0.0476417541503906 2 Unmodified _NEGTGKSSW_ ENSG00000118689|ENST00000406360|FOXO3;ENSG00000150907|ENST00000379561|FOXO1;ENSG00000204060|ENST00000641094|FOXO6;ENST00000395675.4_1_17:18575090-18575600:-|nuORF;nc|ENSG00000118689|O43524-2|FOXO3 20.41453444215458 0.284085796332423 2 {[QD]|[EN]|[WG]|[KD]|[RS]}GTGYKQ 8 4 23.192 0.0 0.0 2.4048 0.0 0.0 0.0 84.00985132388905 84.00985132388905 9.212819689744975 0.0 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.3252574989159953 {[QD]|[EN]|[WG]|[KD]|[RS]}GTGYKQ 2.4048 - 179 + 1 2.128 38481.9 1.0 1077 3125 4202 DOHH2_400M_050219_2,4204 DOHH2_400M_050219_2,4204,NEGTGKSSW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4206 21.003 86.0 457310.0 25 0 33314.0 + 8187 EPSETQRQL 9 68 544.2720145266449 1086.5294761200896 2 544.2725097537041 MULTI CID FTMS 0 0 0 4205 208678.921875 0.6329034316282182 -1 0.006378173828125 1 Unmodified _EPSETQRQL_ REV__ENST00000216968.4_1_20:33764858-33765056:+|nuORF 14.838274106304384 0.4350285940865338 2 [EP]QDT[WK]A{I|L} 9 -1 + 34.447 0.0 0.0 3.1703 3.1703 71.3 0.0 0.0 0.0 15.30471667985922 6.655462488490691 6.655462488490691 4.380843058906841 0 0.0 1.154901959985743 0.0 0.3054621874040891 [EP]QDT[WK]A{I|L};[EP]S{[ET]|[MV]}G{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L};[EP]SD{I|L}{I|L}[WD]{I|L};[EP][AG]DT[WK]A{I|L};[EP]SDAA[WK]A{I|L};[EP]S{[WT]|[RM]}{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L};{[CP]|[EA]}{I|L}{[ET]|[MV]}G{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L};[EP]SD{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PG];{[CP]|[EA]}{I|L}{[WT]|[RM]}{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L};[TA][WK]G{[ET]|[MV]}S[HA] 3.1703;2.7671;2.3609;2.3229;2.3229;1.775;1.7001;1.0743;0.70803;0.64929 -;-;-;-;-;-;-;-;-;- 166 + 1 2.128 37112.2 1.0 1078 3126 4205 DOHH2_400M_050219_2,4206 DOHH2_400M_050219_2,4206,EPSETQRQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4207 21.009 371.0 209220.0 25 0 17323.0 + 29901 QSDMGREAAY 10 98 564.2429962545693 1126.4714395759386 2 564.2412597537041 MULTI CID FTMS 0 0 0 4205 105312.2734375 0.472114966826147 -3 0.053955078125 2 Unmodified _QSDMGREAAY_ ENSG00000130748|ENST00000253047|TMEM160 20.41453444215458 0.5050059513928961 2 {[QS]|[NT]}DM 4 6 29.781 0.0 0.0 2.6438 0.0 0.0 0.0 662.2925509088499 662.2925509088499 8.812281309285623 0.0 0.0 0.0 0 0.2614393726401688 1.3979400086720375 0.0 0.0 + {[QS]|[NT]}DM 2.6438 + + 49 + 1 2.128 63428.4 1.0 1079 3126 4205 DOHH2_400M_050219_2,4207 DOHH2_400M_050219_2,4207,QSDMGREAAY False True QSDMGREAAY 21.009397 564.241259753704 1121792.875 4205.0 ENSG00000130748|ENST00000253047|TMEM160 7.782750129699707 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4208 21.014 248.0 361070.0 25 0 46010.0 + 30019 QTLQGSPL 8 110 422.23265385012536 842.4507547670507 2 422.2328369021416 MULTI CID FTMS 0 0 0 4205 99485.75 0.8096931919439756 -1 0.006378173828125 3 Unmodified _QTLQGSPL_ REV__ENST00000408914.2_1_21:37422526-37423618:+|nuORF 13.50788311687929 0.7113601687236069 2 {NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}NG 7 -1 17.056 0.0 0.0 2.0246 0.0 0.0 0.0 68.05135523013905 68.05135523013905 1.5714508039097588 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.25 {NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}NG 2.0246 - 148 + 1 2.128 74607.5 1.0 1080 3126 4205 DOHH2_400M_050219_2,4208 DOHH2_400M_050219_2,4208,QTLQGSPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4210 21.02 207.0 332820.0 25 0 68277.0 + 19011 LDKINVRK 8 88 493.3117301023464 0 493.3101989626884 PEAK CID FTMS 0 0 0 4209 99211.953125 0.3925125360711279 3 -0.0696334838867187 1 Unmodified _LDKINVRK_ ENST00000522406.5_1_17:67144970-67178294:-|nuORF 44.40701690623563 0.1214779822192256 2 DK[RV]QV 6 5 21.476 0.0 0.0 2.1811 0.0 0.0 113.08492755246978 143.0829256647094 256.1678532171792 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 1.3807196863200843 DK[RV]QV 2.1811 - 116 + 1 2.128 55407.1 1.0 1081 3127 4209 DOHH2_400M_050219_2,4210 DOHH2_400M_050219_2,4210,LDKINVRK True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4211 21.034 800.0 140450.0 25 0 19544.0 + -1 YLFDCIQDKEE 11 107 730.3220190329226 1458.6294851326452 2 730.3211547732353 MULTI CID FTMS 0 0 0 4209 108629.796875 0.1193810448580911 -7 0.168954849243164 2 Carbamidomethyl (C) _YLFDC(Carbamidomethyl (C))IQDKEE_ REV__ENSG00000160957|ENST00000617875|RECQL4 17.11289562659939 0.6791789249425932 2 [Y{I|L}][C(Carbamidomethyl (C))M]NQDT{I|L}S 10 -1 66.921 0.0 0.0 4.5879 0.0 0.0 0.0 230.1150301568969 230.1150301568969 37.47390280316482 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.0189301784845295 0.6549471895720985 [Y{I|L}][C(Carbamidomethyl (C))M]NQDT{I|L}S 4.5879 - 1219 + 1 2.128 84153.2 0.5400000214576721 1082 3127 4209 DOHH2_400M_050219_2,4211 DOHH2_400M_050219_2,4211,YLFDCIQDKEE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4212 21.039 289.0 180800.0 25 0 8422.2 -1 0 76 696.3203803262073 695.3131038596073 1 696.3193847537041 MULTI CID FTMS 0 0 0 4209 258739.359375 0.6626522402088305 4 -0.1018657684326171 3 2 {I|L}TENGY 6 -1 + 64.971 0.0 0.0 9.3441 9.3441 85.693 0.0 0.0 0.0 2.938066573000704 2.938066573000704 2.938066573000704 2.938066573000704 0 1.4604093769761874 1.3010299956639813 0.3252574989159953 1.2614393726401687 {I|L}TENGY;[{I|L}T]ENGY;[{I|L}T]EGGGY;{I|L}TEGGGY;{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}GY;{[ET]|[MV]}{I|L}NGY;{[QS]|[NT]}E{I|L}GY;[AG]DT{I|L}GY;{[ET]|[MV]}N{I|L}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}G[{I|L}T]Y 9.3441;8.9216;6.4084;6.1751;6.141;5.3429;5.1669;4.5928;4.2351;3.9367 -;-;-;-;-;-;-;-;-;- 231 + 1 2.128 43565.4 1.0 1083 3127 4209 DOHH2_400M_050219_2,4212 DOHH2_400M_050219_2,4212, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4214 21.047 290.0 201420.0 25 0 23226.0 + + 39576 MAPNHQTL 8 97 456.2232991186343 910.4320453040684 2 456.2231017947197 MULTI CID FTMS 0 0 0 4213 64444.7734375 0.6576016162036179 -1 0.0254383087158203 1 Unmodified _VCRPGPGEP_ ENST00000566349.5_1_16:87741959-87776602:-|nuORF;ENSG00000104731|ENST00000270583|KLHDC4;nc|ENSG00000104731|Q8TBB5-2|KLHDC4;ENST00000562913.5_1_16:87744798-87760508:-|nuORF;nc|ENSG00000104731|Q8TBB5-3|KLHDC4 21.74664581756881 0.2544899275067181 2 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F} 3 -1 25.942 0.0 0.0 2.8494 0.0 0.0 0.0 558.2913342047123 558.2913342047123 15.104669534178212 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F} 2.8494 - 78 1 2.128 52065.2 1.0 1084 3128 4213 DOHH2_400M_050219_2,4214 DOHH2_400M_050219_2,4214,VCRPGPGEP False False MAPNHQTL 21.047051 456.22310179472 579494.0625 4213.0 ENST00000566349.5_1_16:87741959-87776602:-|nuORF;;ENSG00000104731|ENST00000270583|KLHDC4;;nc|ENSG00000104731|Q8TBB5-2|KLHDC4;;ENST00000562913.5_1_16:87744798-87760508:-|nuORF;;nc|ENSG00000104731|Q8TBB5-3|KLHDC4 4.211994647979736 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4215 21.061 800.0 327790.0 25 0 54647.0 + 12306 GSDRSSFSHY 10 165 571.7462749177067 1141.4779969022134 2 571.7470580935478 MULTI CID FTMS 0 0 0 4213 152475.484375 0.3727458998234061 -5 0.0952186584472656 2 Unmodified _GSDRSSFSHY_ ENSG00000142864|ENST00000361219|SERBP1;ENST00000510079.2_1_4:79102321-79102666:-|nuORF;nc|ENSG00000142864|Q8NC51|SERBP1 35.61225514009592 0.2039006631696762 2 [QT]W{[CA]|SS}{M(Oxidation (M))|F}SHY 9 4 + 53.651 0.0 0.0 4.7001 4.7001 75.66 0.0 0.0 0.0 3.682445481707141 6.517925591522797 3.682445481707141 3.682445481707141 0 1.7614393726401687 0.0 0.75 0.2215141619232908 [QT]W{[CA]|SS}{M(Oxidation (M))|F}SHY;{[QN]|[E{I|L}]|[KN]}Y[PS]{M(Oxidation (M))|F}SHY;Y{[QG]|[NA]}G{M(Oxidation (M))|F}{[CA]|SS}PHY;Y{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[CA]|SS}PHY;[QT]W{[CA]|SS}HPHY;[WC(Carbamidomethyl (C))]SR{M(Oxidation (M))|F}SHY;Y{[QG]|[NA]}G{M(Oxidation (M))|F}[PS]SHY;Y{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[PS]SHY;Y{[QG]|[NA]}G{M(Oxidation (M))|F}{[CA]|SS}PYH;Y{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[CA]|SS}PYH 4.7001;4.3775;3.7322;3.6874;3.5106;3.4245;3.3787;3.3338;3.2507;3.2059 -;-;-;-;-;-;-;-;-;- 1234 1 2.128 194530.0 0.6600000262260437 1085 3128 4213 DOHH2_400M_050219_2,4215 DOHH2_400M_050219_2,4215,GSDRSSFSHY False True GSDRSSFSHY 21.060882 571.7454 6746508.75 4213.0 nc|ENSG00000142864|Q8NC51|SERBP1;;ENST00000510079.2_1_4:79102321-79102666:-|nuORF;;ENSG00000142864|ENST00000361219|SERBP1 4.244930108388265 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4216 21.066 268.0 233740.0 25 0 22607.0 + 36903 TEQSQIKGY 9 98 527.2632145425291 1052.511876151858 2 527.2635986208916 MULTI CID FTMS 0 0 0 4213 127805.4453125 0.4017353025278011 -4 0.0832424163818359 3 Unmodified _TEQSQIKGY_ ENSG00000205155|ENST00000587708|PSENEN 41.8396318013385 0.0653578398400075 2 {[ET]|[MV]}Q{[QS]|[NT]}{I|L}KGY 9 0 + 35.11 0.0 0.0 3.3358 3.3358 76.242 0.0 0.0 0.0 4.762036441594198 9.109517636283332 4.762036441594198 9.109517636283332 0 0.75 0.0 0.5 0.4247425010840047 + + {[ET]|[MV]}Q{[QS]|[NT]}{I|L}KGY;[AG]SQ{I|L}[PA][TP][DP];{[ET]|[MV]}[AG]{[QS]|[NT]}{I|L}KGY;[AG]S{I|L}[TP][PA]Q[DP];{[TV]|[{I|L}S]}Q[TP][PA]Q[DP];[PS][WR][PA]Q[DP];{[QS]|[NT]}{I|L}[TP][PA]Q[DP];YY{I|L}[RV]Q[DP];[AG]S{I|L}Q[PA][TP][DP];{[QS]|[NT]}Q{I|L}[PA][TP][DP] 3.3358;2.4703;2.4609;2.4064;2.0947;1.8747;1.8312;1.7919;1.6737;1.6208 +;-;-;-;-;-;-;-;-;- + 294 + 1 2.128 54505.1 1.0 1086 3128 4213 DOHH2_400M_050219_2,4216 DOHH2_400M_050219_2,4216,TEQSQIKGY True True TEQSQIKGY 21.065855 527.263598620892 1534089.125 4213.0 ENSG00000205155|ENST00000587708|PSENEN 6.871144930521647 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4217 21.08 800.0 201880.0 25 0 14790.0 + 23869 LVKTKEEL 8 151 480.2924915388341 958.5704301444682 2 480.2916442751884 MULTI CID FTMS 0 0 0 4213 89438.7109375 0.4085386490600597 -5 0.0952186584472656 4 Unmodified _LVKTKEEL_ ENSG00000092820|ENST00000367075|EZR;ENST00000486888.1_1_3:104221713-104221830:+|nuORF 43.85829265575387 0.1697421968005898 2 {I|L}VKTC(Carbamidomethyl (C))KTG 8 4 68.107 0.0 0.0 7.105 0.0 0.0 0.0 68.05136285953358 68.05136285953358 45.27987137998679 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.3684151806525389 0.4247425010840047 {I|L}VKTC(Carbamidomethyl (C))KTG 7.105 - 977 + 1 2.128 123974.5 0.4600000083446502 1087 3128 4213 DOHH2_400M_050219_2,4217 DOHH2_400M_050219_2,4217,LVKTKEEL False True LVKTKEEL 21.079672 480.291644275188 984635.4375 4213.0 ENST00000486888.1_1_3:104221713-104221830:+|nuORF;;ENSG00000092820|ENST00000367075|EZR 2.3662993907928467 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4220 21.088 82.0 866730.0 25 0 67891.0 + 12307 GSDRSSFSHY 10 114 381.5002350078203 1141.478875623661 3 381.5001708865166 MULTI CID FTMS 0 0 0 4219 638160.25 0.6477876703568434 -4 0.085458755493164 1 Unmodified _GSDRSSFSHY_ ENSG00000142864|ENST00000361219|SERBP1;ENST00000510079.2_1_4:79102321-79102666:-|nuORF;nc|ENSG00000142864|Q8NC51|SERBP1 21.53697664764585 0.484802182336468 2 GS[KC]DV{M(Oxidation (M))|F}SHY 10 4 + 67.701 0.0 0.0 5.931 5.931 82.618 0.0 0.0 0.0 24.09018283151306 5.797835966168101 5.797835966168101 5.797835966168101 0 0.2742275032520141 1.3979400086720375 0.7614393726401688 0.0 GS[KC]DV{M(Oxidation (M))|F}SHY;GS[KC]DV{M(Oxidation (M))|F}SYH;GS[KC]SD[{M(Oxidation (M))|F}V]HY;GS[KC]SHHSHY;GS[KC]SSHHHY;GS[KC]S{M(Oxidation (M))|F}[DV]HY;GS[KC]SD[{M(Oxidation (M))|F}V]YH;GS[KC]SHHSYH;GS[KC]SSHHYH;GS[KC]DS[{M(Oxidation (M))|F}V]HY 5.931;5.4231;5.3421;5.3421;5.1879;4.9935;4.8342;4.8342;4.6799;4.552 -;-;-;-;-;-;-;-;-;- 897 + 1 2.122 63302.4 1.0 1088 3130 4219 DOHH2_400M_050219_2,4220 DOHH2_400M_050219_2,4220,GSDRSSFSHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4221 21.102 800.0 117390.0 25 0 10619.0 -1 CVCLCCRY 8 133 567.2199895836864 1132.4254262341726 2 567.2203857302666 MULTI CID FTMS 0 0 0 4219 111289.703125 0.9301650225357216 5 -0.1555862426757812 2 3 Carbamidomethyl (C) _CVC(Carbamidomethyl (C))LC(Carbamidomethyl (C))C(Carbamidomethyl (C))RY_ ENST00000471187.1_1_1:43778861-43779798:+|nuORF 6.354104778181461 0.7857632046190106 2 [PG]KD 4 -1 21.161 0.0 0.0 1.8687 0.0 0.0 0.0 732.2051558086445 732.2051558086445 7.181825501145376 0.0 0.0 0.0 0 0.0 2.0 0.2887254899964357 0.0 [PG]KD 1.8687 - 291 1 2.122 74021.1 0.75 1089 3130 4219 DOHH2_400M_050219_2,4221 DOHH2_400M_050219_2,4221,CVCLCCRY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4222 21.116 800.0 137410.0 25 0 28429.0 + 7956 ELSSNPKVEYH 11 86 434.8820306605956 0 434.8817016482353 PEAK CID FTMS 0 0 0 4219 102265.1484375 0.730307710366981 11 -0.3432292938232422 3 Unmodified _ELSSNPKVEYH_ REV__ENSG00000137809|ENST00000315757|ITGA11;REV__nc|ENSG00000137809|Q9UKX5-2|ITGA11 3.2813086475875832 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.122 90493.4 0.6200000047683716 1090 3130 4219 DOHH2_400M_050219_2,4222 DOHH2_400M_050219_2,4222,ELSSNPKVEYH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4225 21.129 394.0 171510.0 25 0 19106.0 + 20979 LNNMRSQY 8 91 513.2452645071979 1024.4759760811958 2 513.2465698122978 MULTI CID FTMS 0 0 0 4224 167297.90625 0.9287644568275086 -2 0.0360260009765625 1 Unmodified _LNNMRSQY_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 52.268347100219714 0.1285778651304833 2 {I|L}NNM 4 4 50.566 0.0 0.0 4.9358 0.0 0.0 0.0 549.2415255182249 549.2415255182249 35.08146596900417 0.0 0.0 0.0 0 0.7742275032520141 1.0969100130080565 0.0 0.3807196863200844 + {I|L}NNM 4.9358 + + 133 + 1 2.122 59241.3 1.0 1091 3132 4224 DOHH2_400M_050219_2,4225 DOHH2_400M_050219_2,4225,LNNMRSQY False True LNNMRSQY 21.129013 513.246569812298 866419.625 4224.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 6.169742107391357 2.0 True 8.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 4226 21.143 800.0 159090.0 25 0 15365.0 + 7263 EESRGNNQW 9 147 560.2440644261657 1118.4735759191312 2 560.2437011599541 MULTI CID FTMS 0 0 0 4224 121189.5078125 0.2219548420380771 -5 0.1056594848632812 2 Unmodified _EESRGNNQW_ ENSG00000099860|ENST00000215631|GADD45B;ENST00000592937.1_1_19:2477233-2477596:+|nuORF 58.6788170122104 0.0268135626297836 2 {[ET]|[MV]}[PG][C(Carbamidomethyl (C))K]NQW 9 5 + 35.837 0.0 0.0 3.2041 3.2041 65.992 0.0 0.0 0.0 0.3701563386385942 5.976526192520336 0.3701563386385942 0.3701563386385942 0 0.4247425010840047 0.0 1.5994850021680094 0.3252574989159953 {[ET]|[MV]}[PG][C(Carbamidomethyl (C))K]NQW;[WE][PA]GN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W;{[ET]|[MV]}[PG][C(Carbamidomethyl (C))K]NGAW;[DP]DRGN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W;[DP][TA][C(Carbamidomethyl (C))K]NQW;[DP][TA][C(Carbamidomethyl (C))K]NGAW;{[ET]|[MV]}[PG]{[WT]|[RM]}DQW;{[ET]|[MV]}[PG]{[WT]|[RM]}DGAW;[DP][TA]{[WT]|[RM]}DQW;{[ET]|[MV]}[PG]{[WT]|[RM]}NEW 3.2041;3.171;3.1632;3.136;3.0175;2.9766;2.9349;2.894;2.7483;2.7366 -;-;-;-;-;-;-;-;-;- 1454 1 2.122 102740.6 0.7799999713897705 1092 3132 4224 DOHH2_400M_050219_2,4226 DOHH2_400M_050219_2,4226,EESRGNNQW True True EESRGNNQW 21.142846 560.243701159954 3447417.0 4224.0 ENST00000592937.1_1_19:2477233-2477596:+|nuORF;;ENSG00000099860|ENST00000215631|GADD45B 7.386572519938151 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4227 21.157 800.0 129010.0 25 0 11890.0 + 28426 PSYGGQQQSY 10 131 557.7439080302436 1113.473263127287 2 557.7435180544853 MULTI CID FTMS 0 0 0 4224 83877.1015625 0.7005225600326137 -1 0.003793716430664 3 Unmodified _PSYGGQQQSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 66.45667989310934 0.0196491505995134 2 [PS]YGGQQQSY 10 0 + 66.777 0.0 0.0 5.9972 5.9972 83.917 0.0 0.0 0.0 10.951041405599142 11.20506544868192 10.951041405599142 6.53212513775344 0 0.8935078169319297 1.0457574905606752 1.5952266673433142 0.3807196863200844 + + [PS]YGGQQQSY;[PS]YNQQQSY;[PS]YGGQ[AG]QSY;[PS]YGGQQ[AG]SY;[PS]YGG[AG]QQSY;{[{M(Oxidation (M))|F}C]|[YS]}PGGQQQSY;[PS]YN[AG]QQSY;[PS]YNQ[AG]QSY;[PS]YNQQ[AG]SY;[HM]QQQGGPTM 5.9972;5.4105;5.1741;5.1741;5.1741;5.0136;4.5835;4.5835;4.5835;4.5722 +;-;-;-;-;-;-;-;-;- + 1797 1 2.122 81279.8 0.699999988079071 1093 3132 4224 DOHH2_400M_050219_2,4227 DOHH2_400M_050219_2,4227,PSYGGQQQSY True True PSYGGQQQSY 21.156678 557.743518054485 743046.0 4224.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 6.313457012176514 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4228 21.163 320.0 271580.0 25 0 22835.0 + 2472 AQYEDIAQK 9 109 533.2639139560051 1064.5132749788102 2 533.2642089724541 MULTI CID FTMS 0 0 0 4224 180855.375 0.718353471362446 -2 0.0360260009765625 4 Unmodified _AQYEDIAQK_ ENSG00000167768|ENST00000252244|KRT1 43.77239144664712 0.0547478964384323 2 [QA]YED{I|L}AQK 9 0 [QA] + + 52.1 19.062 9.5745 4.8943 4.8943 55.108 0.0 0.0 0.0 0.0 33.32819167884611 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.6803115997617928 + + [QA]YED{I|L}AQK 4.8943 + + 248 + 1 2.122 72902.7 1.0 1094 3132 4224 DOHH2_400M_050219_2,4228 DOHH2_400M_050219_2,4228,AQYEDIAQK True True AQYEDIAQK 21.1625 533.264208972454 1088829.125 4224.0 ENSG00000167768|ENST00000252244|KRT1 6.048784732818604 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4230 21.171 312.0 218170.0 25 0 29612.0 -1 0 73 437.20525999394346 436.19798352734347 1 437.2033874392509 MULTI CID FTMS 0 0 0 4229 102115.0546875 0.4428194068108409 -6 0.1486015319824218 1 2 Y 1 -1 12.218 0.0 0.0 2.8011 0.0 0.0 255.1237475427716 0.0 255.1237475427716 0.0 11.839883926472972 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.8011 - 8 + 1 2.122 59853.0 1.0 1095 3133 4229 DOHH2_400M_050219_2,4230 DOHH2_400M_050219_2,4230, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4231 21.173 110.0 479960.0 25 0 47124.0 + 32827 SEGDITQKGY 10 87 549.258389923493 1096.502226913786 2 549.2594482302666 MULTI CID FTMS 0 0 0 4229 493746.0625 0.9525001852265924 -1 0.0429420471191406 2 Unmodified _SEGDITQKGY_ ENSG00000066084|ENST00000301180|DIP2B;ENSG00000151240|ENST00000280886|DIP2C;ENSG00000160305|ENST00000417564|DIP2A;ENST00000549620.5_1_12:50898851-51072694:+|nuORF;nc|ENSG00000160305|Q14689-2|DIP2A;nc|ENSG00000160305|Q14689-3|DIP2A;nc|ENSG00000160305|Q14689-4|DIP2A;nc|ENSG00000160305|Q14689-6|DIP2A 57.24910588100465 0.0438022649904578 2 {[ES]|[DT]|[{I|L}C]}GD{I|L}TQKGY 10 0 + 62.121 0.0 0.0 5.6653 5.6653 85.172 0.0 0.0 0.0 17.97804606261888 11.7883400458539 11.7883400458539 9.164539485499256 0 1.6549471895720984 0.0 0.0 0.4247425010840047 + + {[ES]|[DT]|[{I|L}C]}GD{I|L}TQKGY;{[ES]|[DT]|[{I|L}C]}GD{I|L}T[AG]KGY;{[ES]|[DT]|[{I|L}C]}GD[WR]KGY;{[ES]|[DT]|[{I|L}C]}G{I|L}QKG{[ES]|[DT]|[{I|L}C]}Y;{[MG]|[TS]}PTQKG{[ES]|[DT]|[{I|L}C]}Y;{[MG]|[TS]}PTQK{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y;{[ES]|[DT]|[{I|L}C]}G{I|L}[AG]KG{[ES]|[DT]|[{I|L}C]}Y;{[MG]|[TS]}PT[AG]KG{[ES]|[DT]|[{I|L}C]}Y;{[MG]|[TS]}PT[AG]K{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y;[KQ]TG{NN|[MP]|[D{I|L}]|[EV]}G{[ES]|[DT]|[{I|L}C]}Y 5.6653;4.8295;3.7958;3.2002;2.7076;2.3865;2.3644;1.8719;1.5467;0.87073 +;-;-;-;-;-;-;-;-;- + 380 + 1 2.122 46200.3 1.0 1096 3133 4229 DOHH2_400M_050219_2,4231 DOHH2_400M_050219_2,4231,SEGDITQKGY True True SEGDITQKGY 21.172894 549.259448230267 2484522.75 4229.0 ENSG00000160305|ENST00000417564|DIP2A;;ENSG00000151240|ENST00000280886|DIP2C;;nc|ENSG00000160305|Q14689-4|DIP2A;;ENST00000549620.5_1_12:50898851-51072694:+|nuORF;;nc|ENSG00000160305|Q14689-6|DIP2A;;ENSG00000066084|ENST00000301180|DIP2B;;nc|ENSG00000160305|Q14689-3|DIP2A;;nc|ENSG00000160305|Q14689-2|DIP2A 7.122003237406413 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4232 21.175 74.0 1122600.0 25 0 142140.0 -1 0 91 361.1853361393804 360.1780596727804 1 361.1848937869072 MULTI CID FTMS 0 0 0 4229 415143.3125 0.3119770317629523 -2 0.0467357635498046 3 2 DAR 3 -1 + 33.729 0.0 0.0 9.3645 9.3645 96.082 0.0 0.0 0.0 12.84318117920506 14.299598657415682 12.84318117920506 14.299598657415682 0 0.0 0.0 0.0 0.531234684152075 DAR;VGW 9.3645;5.3943 -;- 22 + 1 2.122 73259.8 1.0 1097 3133 4229 DOHH2_400M_050219_2,4232 DOHH2_400M_050219_2,4232, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4233 21.188 800.0 171160.0 25 0 12971.0 -1 SCISMMFESP 10 161 582.225342227793 1162.436131522386 2 582.2247192263603 MULTI CID FTMS 0 0 0 4229 156200.421875 0.2355468301214497 -5 0.1231632232666015 4 2 Oxidation (M) _SCISM(Oxidation (M))M(Oxidation (M))FESP_ ENSG00000102452|ENST00000251127|NALCN 10.073929032068715 0.6785112666868882 2 [MT]ASS{[{M(Oxidation (M))|F}H]|[RQ]}A 8 -1 47.378 0.0 0.0 4.0757 0.0 0.0 0.0 327.0407234698982 327.0407234698982 29.14460548615841 0.0 0.0 0.0 0 0.7134679910804405 2.0 1.3754223615525998 0.7059771852360797 [MT]ASS{[{M(Oxidation (M))|F}H]|[RQ]}A 4.0757 - 2137 1 2.122 104974.1 0.6600000262260437 1098 3133 4229 DOHH2_400M_050219_2,4233 DOHH2_400M_050219_2,4233,SCISMMFESP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4235 21.205 800.0 87041.0 25 0 5321.8 -1 DSEMDPSCCSL 11 99 658.7236291868355 1315.432705440471 2 658.7228271365166 MULTI CID FTMS 0 0 0 4234 119915.2421875 0.94278293221587 -1 0.0259208679199218 1 2 Carbamidomethyl (C),Oxidation (M) _DSEM(Oxidation (M))DPSC(Carbamidomethyl (C))C(Carbamidomethyl (C))SL_ ENSG00000166510|ENST00000591504|CCDC68;ENST00000587148.2_1_18:52605184-52610022:-|nuORF 18.1463463914782 0.6576820063886638 2 E[SG][WD]DNY 8 -1 16.393 0.0 0.0 1.2462 0.0 0.0 331.10238026197914 0.0 331.10238026197914 0.0 4.953584662885719 0.0 0.0 0 0.2742275032520141 0.0 0.4247425010840047 0.6549471895720984 E[SG][WD]DNY 1.2462 - 228 + 1 2.122 56786.9 0.5400000214576721 1099 3134 4234 DOHH2_400M_050219_2,4235 DOHH2_400M_050219_2,4235,DSEMDPSCCSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4236 21.207 125.0 363860.0 25 0 42497.0 + 5341 DLGRKITSA 9 78 480.7775562008986 959.5405594685972 2 480.7770873904228 MULTI CID FTMS 0 0 0 4234 241232.390625 1.0 0 0.0 2 Unmodified _DLGRKITSA_ ENSG00000100883|ENST00000216774|SRP54;ENST00000546080.5_1_14:35465915-35470150:+|nuORF;ENST00000553544.1_1_14:35465915-35466038:+|nuORF;ENST00000555317.5_1_14:35465915-35468856:+|nuORF;ENST00000555535.1_1_14:35465915-35473764:+|nuORF 19.361941925380144 0.3125782356748823 2 D{I|L} 2 7 39.464 0.0 0.0 4.1128 0.0 0.0 0.0 728.3998507135374 728.3998507135374 26.047575072713155 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + D{I|L} 4.1128 + + 84 + 1 2.122 38857.6 1.0 1100 3134 4234 DOHH2_400M_050219_2,4236 DOHH2_400M_050219_2,4236,DLGRKITSA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4237 21.221 800.0 203870.0 25 0 17622.0 + 33447 SIDDQSQQSY 10 151 585.7488011095982 1169.4830492859962 2 585.7488891482353 MULTI CID FTMS 0 0 0 4234 186065.90625 0.4734901653980453 -2 0.0688629150390625 3 Unmodified _SIDDQSQQSY_ ENSG00000145817|ENST00000274496|YIPF5;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;ENST00000522203.5_1_5:143545115-143549519:-|nuORF;nc|ENSG00000145817|Q969M3-3|YIPF5 60.07390631473393 0.0363923079357811 2 [AG]SDDQQSQSY 11 5 QSY + + 32.54 31.744 8.3942 2.7825 2.7825 48.523 0.0 0.0 0.0 0.7965801591392427 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.2931576817365436 0.3494850021680094 [AG]SDDQQSQSY 2.7825 - 1302 1 2.122 122764.3 0.7300000190734863 1101 3134 4234 DOHH2_400M_050219_2,4237 DOHH2_400M_050219_2,4237,SIDDQSQQSY True True SIDDQSQQSY 21.221052 585.748889148235 4212977.5 4234.0 ENST00000522203.5_1_5:143545115-143549519:-|nuORF;;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;;ENSG00000145817|ENST00000274496|YIPF5;;nc|ENSG00000145817|Q969M3-3|YIPF5 6.6374382972717285 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4238 21.225 225.0 275780.0 25 0 27565.0 + -1 AEDEGVSQRKF 11 82 422.5420855223141 1264.6044271671424 3 422.5418273806572 MULTI CID FTMS 0 0 0 4234 114381.015625 1.0 0 0.0 4 Carbamidomethyl (C) _QEKKTC(Carbamidomethyl (C))GQRM_ ENSG00000213719|ENST00000375784|CLIC1 10.898955630103616 0.6646681216928481 2 {M(Oxidation (M))|F} 1 -1 15.485 0.0 0.0 1.2245 0.0 0.0 1099.5250489706564 0.0 1099.5250489706564 0.0 4.647094628571464 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2245 + + 142 + 1 2.122 54521.9 1.0 1102 3134 4234 DOHH2_400M_050219_2,4238 DOHH2_400M_050219_2,4238,QEKKTCGQRM False False AEDEGVSQRKF 21.225281 422.541827380657 518521.34375 4234.0 ENSG00000213719|ENST00000375784|CLIC1 0.4287595351537068 3.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4239 21.239 800.0 166300.0 25 0 18683.0 + 4300 DARIKQGL 8 150 450.7669019998899 899.5192510665798 2 450.7678405642509 MULTI CID FTMS 0 0 0 4234 88932.1171875 1.0 0 0.0 5 Unmodified _DARIKQGL_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA;nc|ENSG00000115970|Q6YHU6-6|THADA 49.93300154707207 0.1395624531867191 2 {I|L}SVAGRQG{I|L} 9 6 + 36.969 0.0 0.0 4.1099 4.1099 74.653 0.0 0.0 0.0 4.832633025923464 6.409780573583316 4.832633025923464 4.832633025923464 0 1.1822333069283657 0.0 0.0 0.2396518287104437 {I|L}SVAGRQG{I|L};[VS]{I|L}AGRQG{I|L};{I|L}SVAGRQVA;{I|L}SVQRQG{I|L};{I|L}SVAGR[AG]G{I|L};{I|L}SVAG[VG]QG{I|L};{I|L}SVAGRQAV;[VS]{I|L}AGRQVA;[VS]{I|L}QRQG{I|L};{I|L}SVQRQVA 4.1099;3.5726;3.3973;3.3897;3.0862;3.0862;3.0043;2.8601;2.8525;2.6771 -;-;-;-;-;-;-;-;-;- 574 + 1 2.122 109476.4 0.4099999964237213 1103 3134 4234 DOHH2_400M_050219_2,4239 DOHH2_400M_050219_2,4239,DARIKQGL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4241 21.244 52.0 1027200.0 25 0 230620.0 + 838 AETGQVQKI 9 76 487.26945628357527 972.5243596339506 2 487.2697936892509 MULTI CID FTMS 0 0 0 4240 563854.0 0.1790689323164094 5 -0.1671466827392578 1 Unmodified _AETGQVQKI_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 22.736283301280096 0.2418982879461534 2 [TA][WQ]VQK{I|L} 8 2 [TA][WQ]V + + 18.141 -1.1058 -0.18894 1.8653 1.8653 47.307 0.0 0.0 0.0 0.0 -0.2042546222716446 -0.2042546222716446 0.0 0 0.0 0.0 0.0 0.4247425010840047 [TA][WQ]VQK{I|L} 1.8653 - 103 + 1 2.124 49431.5 1.0 1104 3135 4240 DOHH2_400M_050219_2,4241 DOHH2_400M_050219_2,4241,AETGQVQKI False True AETGQVQKI 21.244179 487.269793689251 13349221.0 4240.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 4.787129084269206 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4242 21.246 107.0 580200.0 25 0 73840.0 + 17434 KNDIEIKKL 9 100 367.5608269490381 1099.6606514473142 3 367.5608093142509 MULTI CID FTMS 0 0 0 4240 317158.96875 0.0713281157405668 8 -0.2164020538330078 2 Unmodified _KNDIEIKKL_ REV__ENSG00000145241|ENST00000273853|CENPC;REV__ENST00000510189.5_1_4:68359569-68411187:-|nuORF;REV__nc|ENSG00000145241|Q03188-2|CENPC 14.838274106304384 0.4350285940865338 2 {I|L} 1 -1 15.379 0.0 0.0 1.3985 0.0 0.0 968.5655261805158 0.0 968.5655261805158 0.0 2.843137081785052 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 1.3985 + + 57 + 1 2.124 58036.6 1.0 1105 3135 4240 DOHH2_400M_050219_2,4242 DOHH2_400M_050219_2,4242,KNDIEIKKL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4243 21.251 272.0 299170.0 25 0 45967.0 + 7015 EEKPTKENW 9 97 580.7829127516582 0 580.7826415896416 PEAK CID FTMS 0 0 0 4240 286383.375 0.7621358940705333 -1 0.0506973266601562 3 Unmodified _EEKPTKENW_ ENSG00000134900|ENST00000376052|TPP2;ENST00000466153.5_1_13:103307300-103330663:+|nuORF;nc|ENSG00000134900|P29144|TPP2 51.629811660486645 0.0272106947810716 2 KPTPQ 5 6 21.216 0.0 0.0 1.8297 0.0 0.0 258.0845944376824 347.1359041803344 605.2204986180168 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.3807196863200844 KPTPQ 1.8297 - 233 + 1 2.124 67406.7 1.0 1106 3135 4240 DOHH2_400M_050219_2,4243 DOHH2_400M_050219_2,4243,EEKPTKENW True True EEKPTKENW 21.251477 580.782641589642 1933871.875 4240.0 ENST00000466153.5_1_13:103307300-103330663:+|nuORF;;nc|ENSG00000134900|P29144|TPP2;;ENSG00000134900|ENST00000376052|TPP2 6.936209042867024 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4244 21.256 238.0 270120.0 25 0 40465.0 + 3539 CVSVLHKE 8 88 457.7416032413503 913.4686535495006 2 457.7419006228447 MULTI CID FTMS 0 0 0 4240 183457.03125 0.7913502360958424 -2 0.0766181945800781 4 Unmodified _CVSVLHKE_ REV__ENSG00000136636|ENST00000259154|KCTD3;REV__nc|ENSG00000136636|Q9Y597-2|KCTD3 9.38312468134398 0.7673771031149565 2 V{I|L}HEK 5 -1 17.523 0.0 0.0 1.9183 0.0 0.0 289.1093362446007 0.0 289.1093362446007 0.0 12.038654110982495 0.0 0.0 0 0.0 0.0 0.5796896906561032 0.0 V{I|L}HEK 1.9183 - 111 + 1 2.124 55048.0 1.0 1107 3135 4240 DOHH2_400M_050219_2,4244 DOHH2_400M_050219_2,4244,CVSVLHKE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4245 21.261 250.0 181180.0 25 0 23373.0 + -1 LEGDLRVMK 9 81 538.7922145327504 1075.5698761323008 2 538.7921630740166 MULTI CID FTMS 0 0 0 4240 177028.34375 0.4544359695223683 7 -0.2097034454345703 5 Oxidation (M) _LEGDLRVM(Oxidation (M))K_ REV__ENST00000552266.1_1_12:56504682-56504898:+|nuORF 19.256988751693697 0.3154191944385105 2 T{M(Oxidation (M))|F}K 3 -1 43.94 0.0 0.0 4.0853 0.0 0.0 681.3807366502455 0.0 681.3807366502455 0.0 29.47621246364342 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 4.0853 - 197 1 2.124 40596.1 1.0 1108 3135 4240 DOHH2_400M_050219_2,4245 DOHH2_400M_050219_2,4245,LEGDLRVMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4246 21.265 239.0 275340.0 25 0 43519.0 34646 SPPPPPPPP 9 78 441.73977874298777 881.4650045527756 2 441.7397338747978 MULTI CID FTMS 0 0 0 4240 152779.875 0.227734692518133 -18 0.4859790802001953 6 Unmodified _SPPPPPPPP_ ENSG00000099999|ENST00000382363|RNF215;ENSG00000100312|ENST00000216139|ACR;ENSG00000103479|ENST00000262133|RBL2;ENSG00000107816|ENST00000454422|LZTS2;ENSG00000109920|ENST00000263773|FNBP4;ENSG00000120549|ENST00000376454|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;ENSG00000136754|ENST00000376140|ABI1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000164944|ENST00000297591|VIRMA;ENSG00000184863|ENST00000401878|RBM33;ENSG00000260428|ENST00000567180|SCX;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;nc|ENSG00000109920|Q8N3X1-2|FNBP4;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000015285|ENST00000376701|WAS;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000100201|ENST00000403230|DDX17;REV__ENSG00000107816|ENST00000454422|LZTS2;REV__ENSG00000112541|ENST00000539869|PDE10A;REV__ENSG00000127666|ENST00000248244|TICAM1;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENSG00000141867|ENST00000679869|BRD4;REV__ENSG00000143006|ENST00000371445|DMRTB1;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000204334|ENST00000697325|ERICH2;REV__ENSG00000242265|ENST00000612748|PEG10;REV__ENST00000216019.11_1_22:38881942-38884127:-|nuORF;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF;REV__ENST00000361272.8_2_8:17102747-17104366:-|nuORF;REV__ENST00000431312.2_1_22:38881942-38884127:-|nuORF;REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF;REV__ENST00000482108.1_2_7:94293788-94294991:+|nuORF;REV__ENST00000508096.1_1_10:126605730-126631034:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100201|Q92841-1|DDX17;REV__nc|ENSG00000100201|Q92841-2|DDX17;REV__nc|ENSG00000100201|Q92841-3|DDX17;REV__nc|ENSG00000139218|Q99590-2|SCAF11;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000168066|Q15637-5|SF1;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 93.88341677533236 0.0134066622201488 2 [PS]PPPP[YK] 8 3 + 68.976 0.0 0.0 7.8251 7.8251 95.683 0.0 0.0 0.0 19.69273760456403 6.989700043360188 6.989700043360188 19.69273760456403 0 1.25 2.0 1.4291746928241125 0.0 [PS]PPPP[YK];[YK]SPP[YK];{[HG]|PP}PSPP[YK];{[HG]|PP}SPPP[YK];[PS][YK]P[YK];[YK]PSP[YK];[PS]P[YK][YK];{[HG]|PP}PPSP[YK];{[NV]|[RG]}[YV]P[YK];{[HG]|PP}S[YK][YK] 7.8251;5.591;5.2937;5.0729;4.9607;3.9942;3.7184;3.6969;1.6471;0.96616 -;-;-;-;-;-;-;-;-;- 159 1 2.124 55961.2 1.0 1109 3135 4240 DOHH2_400M_050219_2,4246 DOHH2_400M_050219_2,4246,SPPPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4247 21.267 108.0 302580.0 25 0 81693.0 33654 SITKSKFHS 9 58 517.7870940122954 0 517.7869140505791 PEAK CID FTMS 0 0 0 4240 534228.375 1.0 0 0.0 7 Unmodified _SITKSKFHS_ ENST00000420053.1_1_2:105012170-105012470:-|nuORF 6.2057823575117 0.3444685223463735 2 T 1 8 1.5938 0.0 0.0 0.1542 0.0 0.0 804.4164446390454 125.07253442935782 929.4889790684032 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + T 0.1542 + + 6 + 1 2.124 30478.4 1.0 1110 3135 4240 DOHH2_400M_050219_2,4247 DOHH2_400M_050219_2,4247,SITKSKFHS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4248 21.272 245.0 390160.0 25 0 55435.0 + 32850 SEGYPGQRY 9 100 528.7406681788038 1055.4667834244076 2 528.7396728396416 MULTI CID FTMS 0 0 0 4240 214866.765625 0.1239147938884236 -5 0.1555862426757812 8 Unmodified _SEGYPGQRY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 46.020951573049366 0.0490941689151868 2 {[ES]|[DT]|[{I|L}C]}THYTRY 8 5 + 34.7 0.0 0.0 3.2876 3.2876 71.117 0.0 0.0 0.0 4.787795225279119 4.787795225279119 4.787795225279119 3.949791016870062 0 0.8252574989159953 0.0 0.0 0.3252574989159953 {[ES]|[DT]|[{I|L}C]}THYTRY;{[ES]|[DT]|[{I|L}C]}GYP{[QG]|[NA]}RY;{[ES]|[DT]|[{I|L}C]}G[H{I|L}]DVE[NG];{[MG]|[TS]}EHYTRY;{[ES]|[DT]|[{I|L}C]}YGP{[QG]|[NA]}RY;{[ES]|[DT]|[{I|L}C]}G[H{I|L}]{[QS]|[NT]}Q[NG];{[MG]|[TS]}E[{I|L}P][NP]Q[NG];{[ES]|[DT]|[{I|L}C]}Y[HT]TRY;{[ES]|[DT]|[{I|L}C]}GK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[CS][NG];{[ES]|[DT]|[{I|L}C]}THY[HV]SP 3.2876;2.9134;2.834;2.5287;2.4397;2.3881;1.909;1.7733;1.5845;1.4636 -;+;-;-;-;-;-;-;-;- + 476 + 1 2.124 77539.2 1.0 1111 3135 4240 DOHH2_400M_050219_2,4248 DOHH2_400M_050219_2,4248,SEGYPGQRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4250 21.277 131.0 363420.0 25 0 64740.0 + -1 YLFDCIQDKEE 11 54 730.3220190329226 1458.6294851326452 2 730.3222534060478 MULTI CID FTMS 0 0 0 4249 364912.34375 0.4010282457640832 2 -0.0885868072509765 1 Carbamidomethyl (C) _YLFDC(Carbamidomethyl (C))IQDKEE_ REV__ENSG00000160957|ENST00000617875|RECQL4 8.155526934196011 0.8366696279279818 2 [Y{I|L}][C(Carbamidomethyl (C))M]NQDT{I|L}S 10 -1 59.966 0.0 0.0 4.1111 0.0 0.0 0.0 230.1151064508422 230.1151064508422 47.20163713147958 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.3494850021680094 [Y{I|L}][C(Carbamidomethyl (C))M]NQDT{I|L}S 4.1111 - 107 + 1 2.124 40766.8 1.0 1112 3136 4249 DOHH2_400M_050219_2,4250 DOHH2_400M_050219_2,4250,YLFDCIQDKEE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4251 21.281 209.0 322040.0 25 0 72977.0 + 17599 KPTAAFHLL 9 75 499.2931132986277 996.5716736640552 2 499.2928344607353 MULTI CID FTMS 0 0 0 4249 175261.140625 0.0814464909656488 13 -0.2480850219726562 2 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 2 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3533452890945 667.3533452890945 25.04499578077765 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 19 + 1 2.124 56827.8 1.0 1113 3136 4249 DOHH2_400M_050219_2,4251 DOHH2_400M_050219_2,4251,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4252 21.283 80.0 490850.0 25 0 46351.0 + 36862 TEMESQKQL 9 70 547.2621004501274 1092.509647967055 2 547.2625610232353 MULTI CID FTMS 0 0 0 4249 520129.78125 1.0 0 0.0 3 Unmodified _TEMESQKQL_ ENSG00000087269|ENST00000416614|NOP14;ENST00000507120.1_1_4:2939942-2943434:-|nuORF;nc|ENSG00000087269|P78316-2|NOP14 18.1463463914782 0.3454829746528889 2 {[ET]|[MV]}[WE]C(Carbamidomethyl (C))KQ{I|L} 8 3 + 25.494 0.0 0.0 2.3336 2.3336 76.542 0.0 0.0 0.0 15.009716596306006 7.796269448807212 7.796269448807212 9.262137858390812 0 0.5 0.0 0.0 0.6549471895720985 {[ET]|[MV]}[WE]C(Carbamidomethyl (C))KQ{I|L};{[ET]|[MV]}[WE][CG]KQ{I|L};{[ET]|[MV]}[WE]C(Carbamidomethyl (C))K[AG]{I|L};{[ET]|[MV]}[WE][HK][YT] 2.3336;1.4858;1.2751;0.49348 -;-;-;- 82 + 1 2.124 36063.8 1.0 1114 3136 4249 DOHH2_400M_050219_2,4252 DOHH2_400M_050219_2,4252,TEMESQKQL False True TEMESQKQL 21.282835 547.262561023235 2297612.0 4249.0 ENST00000507120.1_1_4:2939942-2943434:-|nuORF;;nc|ENSG00000087269|P78316-2|NOP14;;ENSG00000087269|ENST00000416614|NOP14 4.49503755569458 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4253 21.291 484.0 123130.0 25 0 8955.0 + 36863 TEMESQKQL 9 106 555.2602748140025 1108.505996694805 2 555.2607299685478 MULTI CID FTMS 0 0 0 4249 118452.71875 0.7885456717317109 -2 0.0835418701171875 4 Oxidation (M) _TEM(Oxidation (M))ESQKQL_ ENSG00000087269|ENST00000416614|NOP14;ENST00000507120.1_1_4:2939942-2943434:-|nuORF;nc|ENSG00000087269|P78316-2|NOP14 62.57269311338072 0.0246576765497938 2 {[ET]|[MV]}{M(Oxidation (M))|F}E{[QS]|[NT]}KQ{I|L} 9 0 + 23.718 0.0 0.0 2.1397 2.1397 77.241 0.0 0.0 0.0 5.5884173874628935 10.176156750357052 5.5884173874628935 11.050083952587295 0 1.3424778212679485 0.0 0.0 1.4386218330464624 + + {[ET]|[MV]}{M(Oxidation (M))|F}E{[QS]|[NT]}KQ{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PA]KQ{I|L};{[QN]|[E{I|L}]|[KN]}K[KG][YC(Carbamidomethyl (C))][DP];[Q{I|L}][WK][YC(Carbamidomethyl (C))][DP];[KQ][W{I|L}][YC(Carbamidomethyl (C))][DP];[Q{I|L}][WQ][WH][DP];[KQ]A{NN|[MP]|[D{I|L}]|[EV]}[WH][DP] 2.1397;1.1428;0.89017;0.69004;0.44146;0.25962;0.16503 +;-;-;-;-;-;- + 335 + 1 2.124 50458.4 1.0 1115 3136 4249 DOHH2_400M_050219_2,4253 DOHH2_400M_050219_2,4253,TEMESQKQL True False TEMESQKQL 21.291397 555.260729968548 857009.625 4249.0 ENST00000507120.1_1_4:2939942-2943434:-|nuORF;;nc|ENSG00000087269|P78316-2|NOP14;;ENSG00000087269|ENST00000416614|NOP14 4.972073992093404 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4254 21.305 800.0 189700.0 25 0 14365.0 + 18071 KTDSTGTHSLY 11 135 605.2909772703501 1208.5674016075002 2 605.2905151247978 MULTI CID FTMS 0 0 0 4249 112781.734375 0.1319578200413122 -5 0.156198501586914 5 Unmodified _KTDSTGTHSLY_ ENSG00000105738|ENST00000222345|SIPA1L3;ENSG00000116991|ENST00000674635|SIPA1L2;ENSG00000197555|ENST00000381232|SIPA1L1;ENSG00000213445|ENST00000534313|SIPA1;nc|ENSG00000197555|O43166-3|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1 110.79276546118962 0.0144472785759772 2 KTDSSC[RH]{I|L}Y 10 4 + 68.827 0.0 0.0 5.6949 5.6949 75.174 0.0 0.0 0.0 30.33520371230788 15.026975159433531 15.026975159433531 0.4582487689833385 0 2.6549471895720984 0.0 0.6694451763165201 0.0 KTDSSC[RH]{I|L}Y;KTDSS[TA]HS{I|L}Y;KTDSRCHS{I|L}Y;K[PS]KC{M(Oxidation (M))|F}HS{I|L}Y;[QA]{I|L}KC{M(Oxidation (M))|F}HS{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[TA]HS{I|L}Y;K[QA]{I|L}C{M(Oxidation (M))|F}HS{I|L}Y;K{[WN]|[YH]}D{M(Oxidation (M))|F}HS{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH[TA]HS{I|L}Y;[{I|L}A]{[{M(Oxidation (M))|F}C]|[YS]}QQHS{I|L}Y 5.6949;5.657;5.3398;4.7965;4.0677;3.8207;3.7822;3.7399;3.6372;3.6317 -;-;-;-;-;-;-;-;-;- 1702 + 1 2.124 111834.6 0.550000011920929 1116 3136 4249 DOHH2_400M_050219_2,4254 DOHH2_400M_050219_2,4254,KTDSTGTHSLY True True KTDSTGTHSLY 21.305245 605.290515124798 9449819.0 4249.0 nc|ENSG00000197555|O43166-3|SIPA1L1;;ENSG00000105738|ENST00000222345|SIPA1L3;;ENSG00000116991|ENST00000674635|SIPA1L2;;nc|ENSG00000197555|O43166|SIPA1L1;;ENSG00000213445|ENST00000534313|SIPA1;;ENSG00000197555|ENST00000381232|SIPA1L1 8.542960484822592 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4256 21.313 315.0 275130.0 25 0 59617.0 24417 MFVHHGDHY 9 91 571.7462749177067 1141.4779969022134 2 571.7461425662041 MULTI CID FTMS 0 0 0 4255 89979.7578125 0.2199670716193615 4 -0.1214504241943359 1 Unmodified _MFVHHGDHY_ ENST00000545606.5_1_12:67706610-67706640:+|nuORF 12.531546534597751 0.4974689918368763 2 {[QN]|[E{I|L}]|[KN]}[DN][HQ]SHY 9 6 + 39.816 0.0 0.0 3.4881 3.4881 79.804 0.0 0.0 0.0 6.399699876253784 23.15314839278568 6.399699876253784 11.178090289248397 0 0.9247425010840048 1.3979400086720375 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[DN][HQ]SHY;[WC(Carbamidomethyl (C))]S[R{M(Oxidation (M))|F}]SHY;[DP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HQ]SHY;[WC(Carbamidomethyl (C))]S[R{M(Oxidation (M))|F}]SYH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NG][R{M(Oxidation (M))|F}]DHY;[WC(Carbamidomethyl (C))]S[R{M(Oxidation (M))|F}]SWN 3.4881;2.5089;1.9148;1.9116;1.8455;1.7368 -;-;-;-;-;- 231 1 2.124 73312.1 1.0 1117 3137 4255 DOHH2_400M_050219_2,4256 DOHH2_400M_050219_2,4256,MFVHHGDHY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4257 21.317 195.0 299670.0 25 0 33683.0 + 7358 EGANCRQV 8 88 438.7017402775497 875.3889276218994 2 438.7015563845634 MULTI CID FTMS 0 0 0 4255 232353.96875 0.1925938775505975 -3 0.1168899536132812 2 Unmodified _EGANCRQV_ REV__ENST00000591278.5_1_19:9266676-9268567:+|nuORF 16.942295170755138 0.6606234159769251 2 {[DA]|[EG]}AGGK 6 -1 51.643 0.0 0.0 5.8995 0.0 0.0 0.0 373.1243685358032 373.1243685358032 37.663800089887545 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[DA]|[EG]}AGGK 5.8995 - 141 + 1 2.124 50025.0 1.0 1118 3137 4255 DOHH2_400M_050219_2,4257 DOHH2_400M_050219_2,4257,EGANCRQV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4258 21.331 800.0 176250.0 25 0 56834.0 + -1 SPTCHMMFHG 10 132 590.2230697009621 1178.4315864687242 2 590.2238647341728 MULTI CID FTMS 0 0 0 4255 154192.3125 0.6608459394400611 -1 0.0333480834960937 3 2 Oxidation (M) _SPTCHM(Oxidation (M))M(Oxidation (M))FHG_ REV__ENST00000262291.8_1_17:57917713-57917824:+|nuORF 6.723162845929126 0.6955379296933136 2 [PS]AAANYSA 9 -1 30.731 0.0 0.0 2.6078 0.0 0.0 0.0 343.0370008046934 343.0370008046934 14.87227936818668 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.1184151806525389 1.079689690656103 [PS]AAANYSA 2.6078 - 816 1 2.124 108629.8 0.6499999761581421 1119 3137 4255 DOHH2_400M_050219_2,4258 DOHH2_400M_050219_2,4258,SPTCHMMFHG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4259 21.337 308.0 198810.0 25 0 9108.8 + 34640 SPNSKVNTL 9 100 480.26185924127896 958.509165549358 2 480.2625915408134 MULTI CID FTMS 0 0 0 4255 101167.3359375 0.6763345410407244 1 -0.0552387237548828 4 Unmodified _SPNSKVNTL_ ENSG00000084754|ENST00000380649|HADHA 22.736283301280096 0.2418982879461534 2 SPN 3 6 46.682 0.0 0.0 4.8703 0.0 0.0 0.0 657.3568209283811 657.3568209283811 28.69911285071794 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + SPN 4.8703 + + 82 + 1 2.124 52077.8 1.0 1120 3137 4255 DOHH2_400M_050219_2,4259 DOHH2_400M_050219_2,4259,SPNSKVNTL False True SPNSKVNTL 21.33663 480.262591540813 705333.25 4255.0 ENSG00000084754|ENST00000380649|HADHA 0.3845824996630351 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4260 21.35 800.0 57842.0 25 0 3331.5 + + -1 EENRNENSGNSW 12 82 718.2954995562942 1434.5764461793883 2 718.2948486208916 MULTI CID FTMS 0 0 0 4255 97878.1015625 1.0 0 0.0 5 2 Carbamidomethyl (C) _FGSYYC(Carbamidomethyl (C))FFKGC(Carbamidomethyl (C))_ ENSG00000139218|ENST00000369367|SCAF11;nc|ENSG00000139218|Q99590-2|SCAF11 11.494710602746466 0.7960433852372589 2 [NS]W{NN|[MP]|[D{I|L}]|[EV]}[VG]NSGNSW 13 -1 + 81.847 0.0 0.0 5.7053 5.7053 74.974 0.0 0.0 0.0 1.8708664335714504 56.625725009367656 1.8708664335714504 0.3218468337140194 0 0.9247425010840048 0.0 2.385151878060192 1.305462187404089 [NS]W{NN|[MP]|[D{I|L}]|[EV]}[VG]NSGNSW;[NS]G{NN|[MP]|[D{I|L}]|[EV]}E[VG]NSGNSW;{[ET]|[MV]}[WP]EENSGNSW;{[CT]|[{M(Oxidation (M))|F}G]}SNGSN{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SQ[YN];[NS]W{NN|[MP]|[D{I|L}]|[EV]}[HD]SGNS{[CT]|[{M(Oxidation (M))|F}G]};[NS]G{NN|[MP]|[D{I|L}]|[EV]}E[HD]SGNS{[CT]|[{M(Oxidation (M))|F}G]} 5.7053;5.6829;4.771;4.3823;0.7773;0.75486 -;-;-;-;-;- 272 1 2.124 39354.7 0.5 1121 3137 4255 DOHH2_400M_050219_2,4260 DOHH2_400M_050219_2,4260,FGSYYCFFKGC False False EENRNENSGNSW 21.350462 718.294848620892 597434.75 4255.0 ENSG00000139218|ENST00000369367|SCAF11;;nc|ENSG00000139218|Q99590-2|SCAF11 7.342333634694417 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4261 21.36 572.0 100440.0 25 0 8399.6 + 33170 SEYESEAKY 9 84 553.237341171943 1104.4601294106858 2 553.2371703982353 MULTI CID FTMS 0 0 0 4255 123548.828125 1.0 0 0.0 6 Unmodified _SEYESEAKY_ ENSG00000152240|ENST00000282058|HAUS1;ENST00000591098.1_1_18:43684359-43698283:+|nuORF 53.832793166522166 0.0319663582346103 2 {[ES]|[DT]|[{I|L}C]}YE{[ES]|[DT]|[{I|L}C]}AKY 9 0 + 55.116 0.0 0.0 4.9903 4.9903 87.934 0.0 0.0 0.0 45.02706335427355 12.252684618815088 12.252684618815088 26.2101498947667 0 1.1237125054200234 1.0969100130080565 0.4247425010840047 0.0 + + {[ES]|[DT]|[{I|L}C]}YE{[ES]|[DT]|[{I|L}C]}AKY;{[ES]|[DT]|[{I|L}C]}Y[TA]WWY;{[ES]|[DT]|[{I|L}C]}Y[TA][WP][HD] 4.9903;2.6172;1.9149 +;-;- + 135 + 1 2.124 50991.8 1.0 1122 3137 4255 DOHH2_400M_050219_2,4261 DOHH2_400M_050219_2,4261,SEYESEAKY True True SEYESEAKY 21.360493 553.237170398235 478129.09375 4255.0 ENST00000591098.1_1_18:43684359-43698283:+|nuORF;;ENSG00000152240|ENST00000282058|HAUS1 6.563954830169678 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4263 21.365 88.0 438860.0 25 0 47588.0 + 38601 TTDSSYGQNY 10 76 568.2303469135617 1134.4461408939233 2 568.2298461794853 MULTI CID FTMS 0 0 0 4262 581199.25 0.5882535870154898 -2 0.0885868072509765 1 Unmodified _TTDSSYGQNY_ ENSG00000270647|ENST00000605844|TAF15;nc|ENSG00000270647|Q92804-2|TAF15 26.88365393820708 0.3646707531412818 2 Y[YE]Y 4 8 20.49 0.0 0.0 1.8061 0.0 0.0 498.2008538839608 0.0 498.2008538839608 0.0 11.56286036684388 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 Y[YE]Y 1.8061 - 88 + 1 2.124 37558.2 1.0 1123 3138 4262 DOHH2_400M_050219_2,4263 DOHH2_400M_050219_2,4263,TTDSSYGQNY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4264 21.372 361.0 263400.0 25 0 14991.0 + 12308 GSDRSSFSHY 10 150 381.5002350078203 1141.478875623661 3 381.5001098513603 MULTI CID FTMS 0 0 0 4262 82249.8359375 0.0834906743395341 4 -0.0882720947265625 2 Unmodified _GSDRSSFSHY_ ENSG00000142864|ENST00000361219|SERBP1;ENST00000510079.2_1_4:79102321-79102666:-|nuORF;nc|ENSG00000142864|Q8NC51|SERBP1 13.042465956692816 0.6287021003332052 2 {M(Oxidation (M))|F} 1 9 11.783 0.0 0.0 1.0322 0.0 0.0 976.399466909597 0.0 976.399466909597 0.0 0.1889428044469987 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0322 + + 129 + 1 2.124 79893.7 1.0 1124 3138 4262 DOHH2_400M_050219_2,4264 DOHH2_400M_050219_2,4264,GSDRSSFSHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4266 21.38 317.0 242430.0 25 0 22112.0 + 5853 DPVRKEVSV 9 96 514.7904980881982 1027.5664432431963 2 514.7904540896416 MULTI CID FTMS 0 0 0 4265 191618.859375 0.5350383705133802 -8 0.2559795379638672 1 Unmodified _DPVRKEVSV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 34.221707139014875 0.1071766711162635 2 VDP 3 8 38.276 0.0 0.0 3.7249 0.0 0.0 0.0 713.3942965143186 713.3942965143186 14.035984316004216 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.0 VDP 3.7249 - 130 + 1 2.124 65841.1 1.0 1125 3139 4265 DOHH2_400M_050219_2,4266 DOHH2_400M_050219_2,4266,DPVRKEVSV True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4267 21.392 721.0 272850.0 25 0 15267.0 + 41269 VPHEKPSVHL 10 242 381.54974387256175 1141.6274022178852 3 381.5522643923759 MULTI CID FTMS 0 0 0 4265 93535.796875 0.6349919791873622 2 -0.0550174713134765 2 Unmodified _VPHEKPSVHL_ REV__ENST00000567299.1_1_19:9629420-9629708:+|nuORF 14.95716135407024 0.5965753712453801 2 VPH{I|L}[WK]YS{I|L} 9 -1 + 39.467 0.0 0.0 3.457 3.457 72.837 0.0 0.0 0.0 20.50144452714428 5.00093905960707 5.00093905960707 5.00093905960707 0 0.0 0.5528419686577808 1.1576960356474644 0.0 VPH{I|L}[WK]YS{I|L};VPH{I|L}[WK]YTV;VPH{I|L}[WK]{[TV]|[{I|L}S]}Y;VPHH[{I|L}V]{[ES]|[DT]|[{I|L}C]}KP;VPH{I|L}[HV]{[ES]|[DT]|[{I|L}C]}KP;VPHH[{I|L}V][WR]V;VPHH[{I|L}V][KP]C{I|L};VPH{I|L}[HV][WR]V;VPH{I|L}[HV][KP]C{I|L};[HS]R[PS][H{I|L}]{I|L}PV 3.457;3.019;2.6445;1.859;1.3825;1.257;1.0278;0.7804;0.55119;0.17579 -;-;-;-;-;-;-;-;-;- 670 + 1 2.124 157946.0 1.0 1126 3139 4265 DOHH2_400M_050219_2,4267 DOHH2_400M_050219_2,4267,VPHEKPSVHL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4268 21.406 800.0 74686.0 25 0 4025.3 + + -1 ASNDYTQQATQS 12 103 678.2892402611731 1354.563927589146 2 678.2882568240166 MULTI CID FTMS 0 0 0 4265 101390.609375 1.0 0 0.0 3 2 Carbamidomethyl (C) _YNLC(Carbamidomethyl (C))C(Carbamidomethyl (C))NPVTSQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 11.494710602746466 0.7960433852372589 2 [AG]TQHP 6 -1 34.051 0.0 0.0 2.5138 0.0 0.0 0.0 760.2738024272898 760.2738024272898 7.509468399664229 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2887254899964357 0.2614393726401688 [AG]TQHP 2.5138 - 1327 1 2.124 49021.1 0.5099999904632568 1127 3139 4265 DOHH2_400M_050219_2,4268 DOHH2_400M_050219_2,4268,YNLCCNPVTSQ False False ASNDYTQQATQS 21.406255 678.288256824017 653811.0625 4265.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 6.53595765431722 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4270 21.413 170.0 325710.0 25 0 23369.0 + 7264 EESRGNNQW 9 96 560.2440644261657 1118.4735759191312 2 560.2443725466728 MULTI CID FTMS 0 0 0 4269 287163.875 0.5259317713648887 3 -0.04925537109375 1 Unmodified _EESRGNNQW_ ENSG00000099860|ENST00000215631|GADD45B;ENST00000592937.1_1_19:2477233-2477596:+|nuORF 32.30548876998284 0.1201446275138228 2 {[ET]|[MV]}[PG][C(Carbamidomethyl (C))K]NQW 9 5 + 38.763 0.0 0.0 3.4657 3.4657 71.009 0.0 0.0 0.0 3.450528104279016 9.208187539523756 3.450528104279016 3.450528104279016 0 0.4247425010840047 0.0 1.5669015600442575 0.3494850021680094 {[ET]|[MV]}[PG][C(Carbamidomethyl (C))K]NQW;[DP][TA][C(Carbamidomethyl (C))K]NQW;[WE][PA]GN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W;[WE][PA]GNNQ{[CT]|[{M(Oxidation (M))|F}G]};[DP][RD]GN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W;[WE][PA]GNNT[KC];[DP][RD]GNNQ{[CT]|[{M(Oxidation (M))|F}G]};[WE]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PEEW;[MT]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[DV][HN];[MT]Q{[MS]|[{M(Oxidation (M))|F}A]}G[DV][HN] 3.4657;3.1572;2.6299;2.3785;2.168;1.976;1.9165;1.9161;1.8955;1.6721 -;-;-;-;-;-;-;-;-;- 487 1 2.124 47534.4 1.0 1128 3140 4269 DOHH2_400M_050219_2,4270 DOHH2_400M_050219_2,4270,EESRGNNQW True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4271 21.427 800.0 166000.0 25 0 19380.0 + 18051 KTDESLTKY 9 150 542.7792171339379 1083.5438813346757 2 542.7794677615166 MULTI CID FTMS 0 0 0 4269 96032.3984375 0.6290446802657145 -9 0.2905006408691406 2 Unmodified _KTDESLTKY_ ENSG00000100888|ENST00000646647|CHD8;ENST00000555301.1_1_14:21862382-21863168:-|nuORF;nc|ENSG00000100888|Q9HCK8-2|CHD8 77.04852534044906 0.0183742546292268 2 KTDES{I|L}TKY 9 0 + 60.816 0.0 0.0 5.6127 5.6127 81.48 0.0 0.0 0.0 14.953913792650129 5.98007616867276 5.98007616867276 5.98007616867276 0 2.193672679568534 0.0 0.0 0.3807196863200844 + + KTDES{I|L}TKY;KTDES{I|L}TYK;K[QA][MT]NTKY;KTDES{I|L}TP{[HG]|PP};K[QA][MT]NTYK;[QA]K[MT]NTKY;[QA]K[MT]NTYK;[QA]K[MT]GGTKY;K[QA][MT]NTP{[HG]|PP};[QA]K[MT]GGTYK 5.6127;5.0608;4.2827;4.0184;3.7308;3.5434;2.9915;2.6936;2.6884;2.1417 +;-;-;-;-;-;-;-;-;- + 943 + 1 2.124 101888.5 0.5199999809265137 1129 3140 4269 DOHH2_400M_050219_2,4271 DOHH2_400M_050219_2,4271,KTDESLTKY True True KTDESLTKY 21.426653 542.779467761517 846023.9375 4269.0 nc|ENSG00000100888|Q9HCK8-2|CHD8;;ENST00000555301.1_1_14:21862382-21863168:-|nuORF;;ENSG00000100888|ENST00000646647|CHD8 4.355342944463094 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4273 21.431 106.0 619490.0 25 0 61914.0 -1 0 83 361.1853361393804 360.1780596727804 1 361.1850158572197 MULTI CID FTMS 0 0 0 4272 263529.3125 0.198040267591403 6 -0.0773563385009765 1 2 DAR 3 -1 + 33.115 0.0 0.0 9.194 9.194 98.289 0.0 0.0 0.0 23.48304000566088 17.541746351190433 17.541746351190433 33.11494025103287 0 0.0 0.0 0.0 0.4698565171985375 DAR 9.194 - 15 + 1 2.124 59923.8 1.0 1130 3141 4272 DOHH2_400M_050219_2,4273 DOHH2_400M_050219_2,4273, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4274 21.435 162.0 467860.0 25 0 214530.0 + 18738 LALGESGTRV 10 54 501.7814173628017 1001.5482817924036 2 502.2833740115166 MULTI CID FTMS 0 0 0 4272 301608.59375 0.7219312996981218 -10 0.3109970092773437 2 Unmodified _LALGESGTRV_ REV__ENSG00000106571|ENST00000395925|GLI3 7.289230182591677 0.6929195370588109 2 {I|L} 1 -1 10.837 0.0 0.0 1.0821 0.0 0.0 870.4536905832223 0.0 870.4536905832223 0.0 3.8477553931086295 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0821 + + 7 + 1 2.124 64353.9 1.0 1131 3141 4272 DOHH2_400M_050219_2,4274 DOHH2_400M_050219_2,4274,LALGESGTRV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4275 21.449 800.0 146440.0 25 0 61483.0 -1 0 97 572.3252471286864 571.3179706620864 1 572.3257934451103 MULTI CID FTMS 0 0 0 4272 96048.140625 0.6619325526860464 12 -0.1972694396972656 3 2 HY 2 -1 14.949 0.0 0.0 2.6165 0.0 0.0 253.18495782204576 0.0 253.18495782204576 0.0 4.11104478033212 0.0 0.0 0 0.0 0.0 0.0 0.0 HY 2.6165 - 25 + 1 2.124 94005.8 0.5299999713897705 1132 3141 4272 DOHH2_400M_050219_2,4275 DOHH2_400M_050219_2,4275, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4277 21.455 226.0 282640.0 25 0 26643.0 + -1 TMQMHQNEE 9 106 582.225342227793 1162.436131522386 2 582.2256347537041 MULTI CID FTMS 0 0 0 4276 322743.28125 0.486689830468379 4 -0.0444869995117187 1 Oxidation (M) _TMQM(Oxidation (M))HQNEE_ REV__ENSG00000082805|ENST00000360905|ERC1;REV__nc|ENSG00000082805|Q8IUD2-2|ERC1;REV__nc|ENSG00000082805|Q8IUD2-3|ERC1;REV__nc|ENSG00000082805|Q8IUD2-4|ERC1 6.2057823575117 0.6980434486082533 2 [MT]A[QT][QT]A 8 -1 30.225 0.0 0.0 2.6002 0.0 0.0 0.0 327.0414877289374 327.0414877289374 13.23576872189598 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3054621874040891 0.7059771852360797 [MT]A[QT][QT]A 2.6002 - 153 1 2.124 53637.1 1.0 1133 3142 4276 DOHH2_400M_050219_2,4277 DOHH2_400M_050219_2,4277,TMQMHQNEE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4280 21.476 800.0 117760.0 25 0 21113.0 + -1 NTQKLCEMM 9 117 585.7488011095982 1169.4830492859962 2 585.7476074099541 MULTI CID FTMS 0 0 0 4279 82504.421875 0.2099526621882877 8 -0.1377162933349609 1 Carbamidomethyl (C),Oxidation (M) _NTQKLC(Carbamidomethyl (C))EM(Oxidation (M))M_ REV__ENSG00000144229|ENST00000409968|THSD7B 19.256988751693697 0.3154191944385105 2 {[TV]|[{I|L}S]}D 3 -1 21.461 0.0 0.0 1.8351 0.0 0.0 0.0 851.3163066924993 851.3163066924993 4.69854271843305 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}D 1.8351 - 132 1 2.124 77550.1 0.6899999976158142 1134 3144 4279 DOHH2_400M_050219_2,4280 DOHH2_400M_050219_2,4280,NTQKLCEMM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4281 21.482 342.0 337280.0 25 0 151850.0 16306 IWRRAPGK 8 85 492.2990351966977 0 492.2993347048759 PEAK CID FTMS 0 0 0 4279 244497.671875 0.5367602642142489 43 -1.5876483917236328 2 Unmodified _IWRRAPGK_ ENSG00000275342|ENST00000615670|PRAG1 4.75600775471527 0.5825752635465162 2 Q 1 8 6.9897 0.0 0.0 0.71136 0.0 0.0 227.1520732236704 624.3478524856534 851.4999257093239 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.71136 - 16 + 1 2.124 94283.1 1.0 1135 3144 4279 DOHH2_400M_050219_2,4281 DOHH2_400M_050219_2,4281,IWRRAPGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4282 21.489 411.0 209810.0 25 0 46145.0 35411 STIQTVNNGK 10 94 531.2812353168115 1060.5479177004229 2 531.7845336794853 MULTI CID FTMS 0 0 0 4279 107412.0234375 1.0 0 0.0 3 Unmodified _STIQTVNNGK_ ENSG00000143341|ENST00000271588|HMCN1;nc|ENSG00000143341|Q96RW7-2|HMCN1 13.042465956692816 0.6287021003332052 2 [KT]T{[TV]|[{I|L}S]}HTTK 9 6 30.423 0.0 0.0 2.8687 0.0 0.0 0.0 59.96937979897646 59.96937979897646 4.840307285005018 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.3054621874040891 [KT]T{[TV]|[{I|L}S]}HTTK 2.8687 - 353 1 2.124 71783.8 1.0 1136 3144 4279 DOHH2_400M_050219_2,4282 DOHH2_400M_050219_2,4282,STIQTVNNGK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4285 21.504 468.0 288000.0 25 0 59334.0 + -1 VGMSMVYERVI 11 92 433.8868614019647 1298.638754806094 3 434.2205078005791 MULTI CID FTMS 0 0 0 4284 113102.5859375 0.9412402739005868 3 -0.0267391204833984 1 Oxidation (M) _VGM(Oxidation (M))SMVYERVI_ REV__ENSG00000184210|ENST00000333026|DGAT2L6 2.843284757254958 0.8617331327080043 2 {I|L} 1 -1 11.783 0.0 0.0 0.90731 0.0 0.0 1167.5438431623425 0.0 1167.5438431623425 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.90731 + + 125 + 1 2.128 109833.4 1.0 1137 3146 4284 DOHH2_400M_050219_2,4285 DOHH2_400M_050219_2,4285,VGMSMVYERVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4288 21.513 96.0 582830.0 25 0 111650.0 34647 SPPPPPPPP 9 70 441.73977874298777 881.4650045527756 2 441.7397033572197 MULTI CID FTMS 0 0 0 4287 503338.125 0.7502791393796375 -5 0.0525226593017578 1 Unmodified _SPPPPPPPP_ ENSG00000099999|ENST00000382363|RNF215;ENSG00000100312|ENST00000216139|ACR;ENSG00000103479|ENST00000262133|RBL2;ENSG00000107816|ENST00000454422|LZTS2;ENSG00000109920|ENST00000263773|FNBP4;ENSG00000120549|ENST00000376454|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;ENSG00000136754|ENST00000376140|ABI1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000164944|ENST00000297591|VIRMA;ENSG00000184863|ENST00000401878|RBM33;ENSG00000260428|ENST00000567180|SCX;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;nc|ENSG00000109920|Q8N3X1-2|FNBP4;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000015285|ENST00000376701|WAS;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000100201|ENST00000403230|DDX17;REV__ENSG00000107816|ENST00000454422|LZTS2;REV__ENSG00000112541|ENST00000539869|PDE10A;REV__ENSG00000127666|ENST00000248244|TICAM1;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENSG00000141867|ENST00000679869|BRD4;REV__ENSG00000143006|ENST00000371445|DMRTB1;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000204334|ENST00000697325|ERICH2;REV__ENSG00000242265|ENST00000612748|PEG10;REV__ENST00000216019.11_1_22:38881942-38884127:-|nuORF;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF;REV__ENST00000361272.8_2_8:17102747-17104366:-|nuORF;REV__ENST00000431312.2_1_22:38881942-38884127:-|nuORF;REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF;REV__ENST00000482108.1_2_7:94293788-94294991:+|nuORF;REV__ENST00000508096.1_1_10:126605730-126631034:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100201|Q92841-1|DDX17;REV__nc|ENSG00000100201|Q92841-2|DDX17;REV__nc|ENSG00000100201|Q92841-3|DDX17;REV__nc|ENSG00000139218|Q99590-2|SCAF11;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000168066|Q15637-5|SF1;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 93.88341677533236 0.0134066622201488 2 [PS]PPPP[YK] 8 3 + 68.198 0.0 0.0 7.7369 7.7369 95.44 0.0 0.0 0.0 17.659167939666318 56.208056475053496 17.659167939666318 19.20818753952375 0 1.274227503252014 1.6989700043360187 1.385151878060192 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[PS][YK]P[YK];[PS]P[YK][YK];{[HG]|PP}S[YK][YK];{[NV]|[RG]}[YV]P[YK] 7.7369;5.5577;4.6322;3.6526;1.4735;1.443 -;-;-;-;-;- 147 1 2.128 49370.8 1.0 1138 3148 4287 DOHH2_400M_050219_2,4288 DOHH2_400M_050219_2,4288,SPPPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4289 21.52 408.0 497640.0 25 0 21741.0 + 594 AEITKEQRL 9 162 363.20865639075816 1086.6041397724746 3 363.2082092165947 MULTI CID FTMS 0 0 0 4287 138145.375 0.3483488140511696 -5 0.0525226593017578 2 Unmodified _AEITKEQRL_ ENSG00000186001|ENST00000425562|LRCH3;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3 36.506200033944 0.094635877243972 2 AE{I|L}TK{I|L}SDT 9 4 70.254 0.0 0.0 6.4655 0.0 0.0 0.0 125.0723818414672 125.0723818414672 40.55105498985191 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 1.4749073637206094 0.4247425010840047 AE{I|L}TK{I|L}SDT 6.4655 - 954 + 1 2.128 163026.0 1.0 1139 3148 4287 DOHH2_400M_050219_2,4289 DOHH2_400M_050219_2,4289,AEITKEQRL True True AEITKEQRL 21.519967 363.208209216595 2221211.3125 4287.0 nc|ENSG00000186001|Q96II8-4|LRCH3;;nc|ENSG00000186001|Q96II8-2|LRCH3;;ENSG00000186001|ENST00000425562|LRCH3;;nc|ENSG00000186001|Q96II8-3|LRCH3 4.154847304026286 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4291 21.525 65.0 890290.0 25 0 174750.0 + 32851 SEGYPGQRY 9 50 528.7406681788038 1055.4667834244076 2 528.7410766482353 MULTI CID FTMS 0 0 0 4290 798522.125 0.4605119095403198 9 -0.3037738800048828 1 Unmodified _SEGYPGQRY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 43.85829265575387 0.0542763391141878 2 {[ES]|[DT]|[{I|L}C]}GYPG 6 3 36.956 0.0 0.0 3.5013 0.0 0.0 0.0 462.2097872369751 462.2097872369751 31.470996953088388 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}GYPG 3.5013 + + 37 + 1 2.128 51651.2 1.0 1140 3149 4290 DOHH2_400M_050219_2,4291 DOHH2_400M_050219_2,4291,SEGYPGQRY True True SEGYPGQRY 21.524686 528.741076648235 16425083.0 4290.0 nc|ENSG00000176974|P34896-2|SHMT1;;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;;ENSG00000176974|ENST00000316694|SHMT1;;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;;nc|ENSG00000176974|P34896-3|SHMT1 7.8457255363464355 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4292 21.529 257.0 255330.0 25 0 35169.0 + 45288 YSDLRKESM 9 89 376.8492642164911 1127.5259632496732 3 376.8493835330009 MULTI CID FTMS 0 0 0 4290 123155.5390625 0.8481852153640997 -3 0.0267391204833984 2 Unmodified _YSDLRKESM_ ENSG00000073111|ENST00000265056|MCM2;ENST00000468414.1_1_3:127336783-127340613:+|nuORF;ENST00000474964.5_1_3:127323572-127340613:+|nuORF 8.97624648632007 0.6013279508813512 2 YMAM 4 7 31.938 0.0 0.0 2.8326 0.0 0.0 0.0 628.3398531549436 628.3398531549436 18.226825097560425 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YMAM 2.8326 - 103 + 1 2.128 60028.6 1.0 1141 3149 4290 DOHH2_400M_050219_2,4292 DOHH2_400M_050219_2,4292,YSDLRKESM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4293 21.532 132.0 609870.0 25 0 230260.0 -1 IMPIVQRA 8 83 472.2725124637117 0 472.2719909548759 PEAK CID FTMS 0 0 0 4290 374975.21875 0.8488750459660843 -3 0.0267391204833984 3 Oxidation (M) _IM(Oxidation (M))PIVQRA_ ENSG00000089154|ENST00000300648|GCN1 5.230669730166228 0.5807325378471833 2 Y 1 -1 3.4949 0.0 0.0 0.37079 0.0 0.0 644.3994122791828 132.04583154849846 776.4452438276812 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.37079 - 2 + 1 2.128 68396.8 1.0 1142 3149 4290 DOHH2_400M_050219_2,4293 DOHH2_400M_050219_2,4293,IMPIVQRA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4294 21.537 260.0 281990.0 25 0 70163.0 + 19066 LDQIFIHV 8 72 492.7775371650183 983.5405213968368 2 492.7780944705009 MULTI CID FTMS 0 0 0 4290 89726.265625 0.3005579693320467 -4 0.0306568145751953 4 Unmodified _LDQIFIHV_ REV__ENSG00000142303|ENST00000597188|ADAMTS10;REV__nc|ENSG00000142303|Q9H324-2|ADAMTS10;REV__nc|ENSG00000142303|Q9H324|ADAMTS10 24.67388899826682 0.525179942228231 2 {I|L}DQ{I|L} 4 -1 54.68 0.0 0.0 5.5596 0.0 0.0 0.0 511.26313196353743 511.26313196353743 41.09509483936506 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.5 {I|L}DQ{I|L} 5.5596 + + 69 + 1 2.128 65261.8 1.0 1143 3149 4290 DOHH2_400M_050219_2,4294 DOHH2_400M_050219_2,4294,LDQIFIHV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4296 21.544 237.0 319040.0 25 0 62516.0 + 17600 KPTAAFHLL 9 77 499.2932215977582 996.5718902623164 2 499.2931396365166 MULTI CID FTMS 0 0 0 4295 188839.515625 0.714940932345053 8 -0.2868175506591797 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 2 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3553752230155 667.3553752230155 19.64908955053953 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 53 + 1 2.128 65355.6 1.0 1144 3150 4295 DOHH2_400M_050219_2,4296 DOHH2_400M_050219_2,4296,KPTAAFHLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4297 21.548 238.0 541990.0 25 0 116480.0 -1 0 78 360.219924061012 359.21264759441203 1 360.2197448611259 MULTI CID FTMS 0 0 0 4295 141670.5 0.1605849137767359 -10 0.1307392120361328 2 2 M 1 -1 11.259 0.0 0.0 3.1344 0.0 0.0 210.1614981576917 0.0 210.1614981576917 0.0 -0.1609234168570061 -0.1609234168570061 0.0 0 0.0 0.0 0.0 0.0 M 3.1344 - 8 + 1 2.128 110424.6 1.0 1145 3150 4295 DOHH2_400M_050219_2,4297 DOHH2_400M_050219_2,4297, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4298 21.562 800.0 126630.0 25 0 12217.0 + 45289 YSDLRKESM 9 110 564.7709004347619 1127.5272479363236 2 564.7716552615166 MULTI CID FTMS 0 0 0 4295 82945.171875 0.8715511099468884 -2 0.028961181640625 3 Unmodified _YSDLRKESM_ ENSG00000073111|ENST00000265056|MCM2;ENST00000468414.1_1_3:127336783-127340613:+|nuORF;ENST00000474964.5_1_3:127323572-127340613:+|nuORF 55.24861242081279 0.0288621114503864 2 YSD{I|L}[RK]ESM 9 0 + 79.734 0.0 0.0 7.0716 7.0716 86.262 0.0 0.0 0.0 59.55645316481359 13.46787486224656 13.46787486224656 5.981362441963327 0 0.8807196863200843 2.0 1.0114393726401687 0.0 + + YSD{I|L}[RK]ESM;YSD[KA]VVESM;YS[WK]VVESM;YSD{I|L}[RK]DTM;YSD[KA]VVDTM;YS[WK]VVDTM;Y{[QN]|[E{I|L}]|[KN]}NQ[W{I|L}]Y;{[ES]|[DT]|[{I|L}C]}MVV[RN]MY;{[CA]|SS}WW[R{I|L}]MY 7.0716;6.5411;6.4052;5.9516;5.4211;5.2852;1.403;0.63011;0.10197 +;-;-;-;-;-;-;-;- + 232 + 1 2.128 83526.7 0.5 1146 3150 4295 DOHH2_400M_050219_2,4298 DOHH2_400M_050219_2,4298,YSDLRKESM True True YSDLRKESM 21.562092 564.771655261517 1094375.78125 4295.0 ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2;;ENST00000468414.1_1_3:127336783-127340613:+|nuORF 8.302630424499512 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4300 21.568 161.0 419080.0 25 0 26746.0 + 18072 KTDSTGTHSLY 11 95 605.2909772703501 1208.5674016075002 2 605.2915527224541 MULTI CID FTMS 0 0 0 4299 403665.1875 0.4722996898766885 10 -0.3705329895019531 1 Unmodified _KTDSTGTHSLY_ ENSG00000105738|ENST00000222345|SIPA1L3;ENSG00000116991|ENST00000674635|SIPA1L2;ENSG00000197555|ENST00000381232|SIPA1L1;ENSG00000213445|ENST00000534313|SIPA1;nc|ENSG00000197555|O43166-3|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1 47.7319792270244 0.130190323903946 2 CHS{I|L}Y 5 7 52.167 0.0 0.0 4.3164 0.0 0.0 587.3140125959 0.0 587.3140125959 0.0 25.74031267727719 0.0 0.0 0 1.274227503252014 0.0 0.9247425010840048 0.0 CHS{I|L}Y 4.3164 - 136 1 2.128 51206.7 1.0 1147 3151 4299 DOHH2_400M_050219_2,4300 DOHH2_400M_050219_2,4300,KTDSTGTHSLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4301 21.572 254.0 298540.0 25 0 33995.0 + 595 AEITKEQRL 9 90 544.3101966901556 1086.6058404471112 2 544.3108398318291 MULTI CID FTMS 0 0 0 4299 148256.09375 1.0 0 0.0 2 Unmodified _AEITKEQRL_ ENSG00000186001|ENST00000425562|LRCH3;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3 36.506200033944 0.094635877243972 2 {[CP]|[EA]}{I|L}TKE{[NV]|[RG]}A{I|L} 10 2 + 48.037 0.0 0.0 4.4209 4.4209 71.091 0.0 0.0 0.0 5.0 1.0914446942506828 1.0914446942506828 1.0914446942506828 0 1.3807196863200843 0.0 0.0 0.3807196863200844 {[CP]|[EA]}{I|L}TKE{[NV]|[RG]}A{I|L};{[CP]|[EA]}{I|L}TK{I|L}[H{I|L}]Y;{[CP]|[EA]}{I|L}TK{I|L}{[WN]|[YH]}{I|L};{I|L}{[CP]|[EA]}TKE{[NV]|[RG]}A{I|L};{I|L}{[CP]|[EA]}TK{I|L}[H{I|L}]Y;{I|L}{[CP]|[EA]}TK{I|L}{[WN]|[YH]}{I|L};{[CP]|[EA]}{I|L}{I|L}[KT][H{I|L}]Y;{[CP]|[EA]}{I|L}{I|L}[KT]{[WN]|[YH]}{I|L} 4.4209;4.3204;4.3204;3.9607;3.8603;3.8603;1.9674;1.9674 -;-;-;-;-;-;-;- 168 + 1 2.128 63974.8 1.0 1148 3151 4299 DOHH2_400M_050219_2,4301 DOHH2_400M_050219_2,4301,AEITKEQRL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4302 21.586 800.0 228910.0 25 0 30196.0 -1 0 35 998.8540492577714 4989.233863955857 5 999.2550536990166 MULTI CID FTMS 0 0 0 4299 87751.03125 0.5250951583541602 -1 0.0251293182373046 3 2 Q 1 -1 3.0989 0.0 0.0 0.062113 0.0 0.0 3862.918752727144 995.226205694006 4858.144958421151 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.062113 - 1 + 1 2.128 127053.5 0.4300000071525574 1149 3151 4299 DOHH2_400M_050219_2,4302 DOHH2_400M_050219_2,4302, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4303 21.597 623.0 155310.0 25 0 56022.0 8552 ETIVIINKFA 10 91 574.3414588904974 0 574.3411132693291 PEAK CID FTMS 0 0 0 4299 81870.0234375 0.7074221260123654 18 -0.7058010101318359 4 Unmodified _ETIVIINKFA_ ENSG00000145860|ENST00000424310|RNF145;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145 6.723162845929126 0.3961065659209837 2 {M(Oxidation (M))|F}P 2 9 9.464 0.0 0.0 0.82534 0.0 0.0 572.392743365176 327.13166223697505 899.5244056021511 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}P 0.82534 - 43 + 1 2.128 78643.6 1.0 1150 3151 4299 DOHH2_400M_050219_2,4303 DOHH2_400M_050219_2,4303,ETIVIINKFA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4305 21.602 80.0 704100.0 25 0 120670.0 + 7359 EGANCRQV 8 68 438.7017402775497 875.3889276218994 2 438.7016174197197 MULTI CID FTMS 0 0 0 4304 666238.8125 0.5522329442633224 12 -0.4111919403076172 1 Unmodified _EGANCRQV_ REV__ENST00000591278.5_1_19:9266676-9268567:+|nuORF 16.942295170755138 0.6606234159769251 2 {[DA]|[EG]}AGG 5 -1 49.208 0.0 0.0 5.6213 0.0 0.0 0.0 501.2220314181846 501.2220314181846 40.79689690656103 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}AGG 5.6213 - 74 + 1 2.128 48379.7 1.0 1151 3152 4304 DOHH2_400M_050219_2,4305 DOHH2_400M_050219_2,4305,EGANCRQV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4306 21.608 349.0 197280.0 25 0 25655.0 + + -1 SEAPARQGF 9 89 481.7382305680128 961.4619082028256 2 481.7386047244072 MULTI CID FTMS 0 0 0 4304 124474.515625 0.6298559059855124 5 -0.2113361358642578 2 Oxidation (M) _ESAPM(Oxidation (M))LWI_ ENSG00000164306|ENST00000314970|PRIMPOL;nc|ENSG00000164306|Q96LW4-2|PRIMPOL 20.871210003555333 0.6025813472596342 2 {[ES]|[DT]|[{I|L}C]}APP[W{I|L}]Y 8 -1 + 34.468 0.0 0.0 3.585 3.585 67.121 0.0 0.0 0.0 6.408654414343182 0.3778856088939974 0.3778856088939974 0.3778856088939974 0 1.424742501084005 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}APP[W{I|L}]Y;{[ES]|[DT]|[{I|L}C]}APP[WY]{I|L};{[ES]|[DT]|[{I|L}C]}AP[{I|L}T][EC]{I|L};{[ES]|[DT]|[{I|L}C]}A{NN|[MP]|[D{I|L}]|[EV]}[HK]Y;{[ES]|[DT]|[{I|L}C]}[HK][W{I|L}]Y;{[ES]|[DT]|[{I|L}C]}[HK][WY]{I|L} 3.585;3.5457;2.3237;0.91922;0.76116;0.72186 -;-;-;-;-;- 84 + 1 2.128 57359.4 1.0 1152 3152 4304 DOHH2_400M_050219_2,4306 DOHH2_400M_050219_2,4306,ESAPMLWI False False SEAPARQGF 21.608135 481.738604724407 1393831.375 4304.0 ENSG00000164306|ENST00000314970|PRIMPOL;;nc|ENSG00000164306|Q96LW4-2|PRIMPOL 5.757824579874675 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4307 21.61 62.0 1059300.0 25 0 333510.0 + 28466 PTGARSPAL 9 68 435.24580476917606 868.4770566051521 2 435.2456542849541 MULTI CID FTMS 0 0 0 4304 970885.375 0.3196609070700071 -3 0.0771560668945312 3 Unmodified _PTGARSPAL_ ENST00000546571.5_1_12:109124172-109124316:-|nuORF 34.40172386719151 0.1061884637610825 2 PT{I|L} 3 6 48.94 0.0 0.0 5.6352 0.0 0.0 0.0 554.2747286432249 554.2747286432249 35.84121882396211 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 PT{I|L} 5.6352 - 47 + 1 2.128 56607.5 1.0 1153 3152 4304 DOHH2_400M_050219_2,4307 DOHH2_400M_050219_2,4307,PTGARSPAL True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4308 21.619 502.0 168770.0 25 0 34905.0 -1 PLEEVMQKYI 10 77 633.3276777093869 0 633.3276244997978 PEAK CID FTMS 0 0 0 4304 118994.953125 0.5937648306189817 -4 0.0891609191894531 4 Oxidation (M) _PLEEVM(Oxidation (M))QKYI_ ENSG00000167264|ENST00000565263|DUS2 6.723162845929126 0.3961065659209837 2 T 1 -1 8.0989 0.0 0.0 0.64041 0.0 0.0 925.4612503388925 235.10901819400627 1160.5702685328988 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 T 0.64041 - 36 + 1 2.128 65943.1 1.0 1154 3152 4304 DOHH2_400M_050219_2,4308 DOHH2_400M_050219_2,4308,PLEEVMQKYI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4309 21.624 306.0 261260.0 25 0 99097.0 + -1 LSCCKLRQEK 10 75 422.2200537237552 1263.6383317714656 3 422.2204772830009 MULTI CID FTMS 0 0 0 4304 110713.0234375 0.8676057684931513 -3 0.0771560668945312 5 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))CKLRQEK_ REV__ENSG00000103494|ENST00000647211|RPGRIP1L;REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L 5.047519993296601 0.7032887582948335 2 Y 1 -1 13.495 0.0 0.0 1.0679 0.0 0.0 1082.564172080839 0.0 1082.564172080839 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0679 - 76 + 1 2.128 68661.5 1.0 1155 3152 4304 DOHH2_400M_050219_2,4309 DOHH2_400M_050219_2,4309,LSCCKLRQEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4311 21.632 299.0 202590.0 25 0 20102.0 + 38602 TTDSSYGQNY 10 109 568.2303469135617 1134.4461408939233 2 568.2308837771416 MULTI CID FTMS 0 0 0 4310 201509.0625 0.2039548895353074 13 -0.5167350769042969 1 Unmodified _TTDSSYGQNY_ ENSG00000270647|ENST00000605844|TAF15;nc|ENSG00000270647|Q92804-2|TAF15 32.30548876998284 0.2428506522065767 2 NY 2 8 20.261 0.0 0.0 1.786 0.0 0.0 839.3290582296639 0.0 839.3290582296639 0.0 10.122796860033674 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + NY 1.786 + + 145 + 1 2.128 51299.1 1.0 1156 3153 4310 DOHH2_400M_050219_2,4311 DOHH2_400M_050219_2,4311,TTDSSYGQNY False True TTDSSYGQNY 21.631906 568.230883777142 10017489.0 4310.0 ENSG00000270647|ENST00000605844|TAF15;;nc|ENSG00000270647|Q92804-2|TAF15 6.991397221883138 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4312 21.637 267.0 723870.0 25 0 57465.0 -1 0 82 624.7864419211343 2495.116661818137 4 625.0375854372978 MULTI CID FTMS 0 0 0 4310 343411.21875 0.0783771437325724 -5 0.1159877777099609 2 2 [RD]WRDD 6 -1 42.268 0.0 0.0 1.694 0.0 0.0 0.0 1648.7279855080471 1648.7279855080471 31.470996953088388 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.3054621874040891 [RD]WRDD 1.694 - 76 1 2.128 144490.3 1.0 1157 3153 4310 DOHH2_400M_050219_2,4312 DOHH2_400M_050219_2,4312, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4313 21.645 445.0 221380.0 25 0 12023.0 -1 0 76 628.7850476617209 2511.1110847804835 4 629.0365478396416 MULTI CID FTMS 0 0 0 4310 132149.671875 0.2422071733319434 -5 0.1159877777099609 3 2 D 1 -1 20.485 0.0 0.0 0.81576 0.0 0.0 1667.744141121657 725.3122204648288 2393.0563615864858 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.0 D 0.81576 - 58 + 1 2.128 80509.0 1.0 1158 3153 4310 DOHH2_400M_050219_2,4313 DOHH2_400M_050219_2,4313, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4314 21.659 800.0 159480.0 25 0 16551.0 + 37228 TIKYKPKQL 9 152 559.850080580542 1117.685608227884 2 559.8499633669853 MULTI CID FTMS 0 0 0 4310 120123.6640625 1.0 0 0.0 4 Unmodified _TIKYKPKQL_ ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14 29.081581746732265 0.1611639662936252 2 {I|L}TKYK 5 6 61.454 0.0 0.0 5.4983 0.0 0.0 0.0 481.27829919986567 481.27829919986567 40.536049848239344 0.0 0.0 0.0 0 0.6505149978319906 2.0 0.0 0.0 {I|L}TKYK 5.4983 - 775 + 1 2.128 101748.7 0.5899999737739563 1159 3153 4310 DOHH2_400M_050219_2,4314 DOHH2_400M_050219_2,4314,TIKYKPKQL False True TIKYKPKQL 21.658614 559.849963366985 163447.8125 4310.0 nc|ENSG00000135317|Q9Y5W7-4|SNX14;;nc|ENSG00000135317|Q9Y5W7-2|SNX14;;nc|ENSG00000135317|Q9Y5W7-3|SNX14;;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;;ENSG00000135317|ENST00000314673|SNX14 3.485235452651977 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4316 21.676 800.0 120760.0 25 0 11854.0 20125 LKKYGFSSV 9 126 514.7904980881982 1027.5664432431963 2 514.7902709841728 MULTI CID FTMS 0 0 0 4315 62526.1171875 0.1745854868547103 7 -0.2741031646728515 1 Unmodified _LKKYGFSSV_ ENSG00000112077|ENST00000371175|RHAG;nc|ENSG00000112077|Q02094-2|RHAG 14.838274106304384 0.4350285940865338 2 SW 2 8 17.563 0.0 0.0 1.7092 0.0 0.0 736.4342518537125 0.0 736.4342518537125 0.0 0.9074314547119364 0.0 0.0 0 0.5 0.0 0.0 0.0 SW 1.7092 - 284 1 2.121 80171.9 0.5400000214576721 1160 3154 4315 DOHH2_400M_050219_2,4316 DOHH2_400M_050219_2,4316,LKKYGFSSV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4317 21.679 165.0 1128400.0 25 0 112190.0 -1 0 73 500.0305046118869 2495.1161407264344 5 500.2315246462822 MULTI CID FTMS 0 0 0 4315 541928.3125 0.1892321605236208 -3 0.0964298248291015 2 2 SCC(Carbamidomethyl (C)) 3 -1 23.188 0.0 0.0 0.92932 0.0 0.0 2126.987588660162 0.0 2126.987588660162 0.0 6.9504625720438895 0.0 0.0 0 0.0 0.0 0.0 0.0 SCC(Carbamidomethyl (C)) 0.92932 - 14 1 2.121 146190.9 1.0 1161 3154 4315 DOHH2_400M_050219_2,4317 DOHH2_400M_050219_2,4317, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4318 21.684 230.0 273150.0 25 0 13585.0 + 44471 YNMTLGDNPY 10 122 594.2564945983788 1186.4984362635576 2 594.2523681521416 MULTI CID FTMS 0 0 0 4315 172733.4375 0.3932409849326169 -3 0.0964298248291015 3 Unmodified _YNMTLGDNPY_ REV__ENSG00000198670|ENST00000316300|LPA 13.90604991867851 0.6142120002215601 2 {[QS]|[NT]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQ 7 -1 33.627 0.0 0.0 2.8342 0.0 0.0 0.0 347.13248446448966 347.13248446448966 19.02320302192139 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.8600233437409719 1.4604093769761874 {[QS]|[NT]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQ 2.8342 - 1095 1 2.121 48982.5 1.0 1162 3154 4315 DOHH2_400M_050219_2,4318 DOHH2_400M_050219_2,4318,YNMTLGDNPY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4319 21.697 800.0 183800.0 25 0 23071.0 + 16715 KETTHVKL 8 133 478.2831888897121 0 478.2832214236259 PEAK CID FTMS 0 0 0 4315 90688.578125 1.0 0 0.0 4 Unmodified _KETTHVKL_ REV__ENSG00000204947|ENST00000378061|ZNF425 9.347437153973935 0.5488964601725408 2 T 1 -1 4.7539 0.0 0.0 0.49803 0.0 0.0 600.3366892034493 250.1457025775676 850.4823917810169 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 T 0.49803 + + 44 + 1 2.121 116192.8 0.4699999988079071 1163 3154 4315 DOHH2_400M_050219_2,4319 DOHH2_400M_050219_2,4319,KETTHVKL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4320 21.701 181.0 496950.0 25 0 105890.0 + -1 TTCCQLSGKR 10 92 577.2783831795753 1152.5422134259504 2 578.2838622927666 MULTI CID FTMS 0 0 0 4315 267489.03125 0.5363012181616833 -4 0.1215591430664062 5 Carbamidomethyl (C) _TTCC(Carbamidomethyl (C))QLSGKR_ REV__ENST00000378163.5_1_X:41712411-41782395:-|nuORF 9.38312468134398 0.6832340498775793 2 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F} 3 -1 15.187 0.0 0.0 1.3177 0.0 0.0 0.0 774.3358405003099 774.3358405003099 2.497557671098196 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F} 1.3177 - 71 1 2.121 71610.6 1.0 1164 3154 4315 DOHH2_400M_050219_2,4320 DOHH2_400M_050219_2,4320,TTCCQLSGKR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4322 21.717 800.0 57250.0 25 0 2419.3 -1 CSWNHYNMQY 10 81 709.7638877053297 1417.5132224774593 2 709.7628661990166 MULTI CID FTMS 0 0 0 4321 59366.9453125 0.5866798955197515 1 -0.06268310546875 1 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))SWNHYNM(Oxidation (M))QY_ ENSG00000241945|ENST00000291576|PWP2 3.944395688203298 0.708391353636983 2 {[TV]|[{I|L}S]}D 3 -1 32.932 0.0 0.0 2.3232 0.0 0.0 0.0 1099.3468460949 1099.3468460949 15.993624753846092 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.5 0.0 {[TV]|[{I|L}S]}D 2.3232 - 31 1 2.121 41053.6 0.550000011920929 1165 3155 4321 DOHH2_400M_050219_2,4322 DOHH2_400M_050219_2,4322,CSWNHYNMQY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4323 21.718 32.0 2610700.0 25 0 245030.0 + 11071 GEASRLAHY 9 80 502.25107931809913 1002.4876057029984 2 502.2513305544853 MULTI CID FTMS 0 0 0 4321 1512669.0 0.1399021192271274 -3 0.103729248046875 2 Unmodified _GEASRLAHY_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814728-149815097:+|nuORF;ENST00000465850.1_1_3:113822098-113822344:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000220323|Q6DRA6|H2BC19P;nc|ENSG00000261716|Q6DN03|H2BC20P 28.49450938151212 0.1686335738423394 2 {[DA]|[EG]}[WK]{I|L}AHY 8 3 + 50.653 0.0 0.0 5.0528 5.0528 81.984 0.0 0.0 0.0 8.57840941039747 14.904630595263413 8.57840941039747 8.57840941039747 0 1.2059771852360797 1.3979400086720375 0.0 0.0 {[DA]|[EG]}[WK]{I|L}AHY;{[WN]|[YH]}{[TV]|[{I|L}S]}{I|L}AHY;Y[EP]{I|L}[YR]Y 5.0528;4.1971;1.6658 -;-;- 64 1 2.121 70114.5 1.0 1166 3155 4321 DOHH2_400M_050219_2,4323 DOHH2_400M_050219_2,4323,GEASRLAHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4324 21.727 498.0 342540.0 25 0 34241.0 + 13287 HIRDRAHIL 9 133 377.55631475601945 1129.6471148682583 3 377.5561401247978 MULTI CID FTMS 0 0 0 4321 157802.28125 0.5277352223785093 -2 0.0769023895263671 3 Unmodified _HIRDRAHIL_ ENSG00000089693|ENST00000203630|MLF2 43.9818466556824 0.0535980856389242 2 [H{I|L}][RD]{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}{I|L} 9 0 + 38.139 0.0 0.0 3.3762 3.3762 75.404 0.0 0.0 0.0 5.932452471761039 27.42538423561819 5.932452471761039 7.781512503836442 0 0.7302046884880937 1.3010299956639813 0.0 0.8494850021680094 + + [H{I|L}][RD]{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}{I|L};[H{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}[RD]H{I|L}{I|L} 3.3762;2.6873 +;- + 70 1 2.121 135861.0 1.0 1167 3155 4321 DOHH2_400M_050219_2,4324 DOHH2_400M_050219_2,4324,HIRDRAHIL True True HIRDRAHIL 21.727109 377.556140124798 1852781.625 4321.0 ENSG00000089693|ENST00000203630|MLF2 4.124930381774902 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4325 21.741 800.0 105210.0 25 0 25036.0 + + 30942 AELEENQRSY 10 88 619.4575158264627 0 619.7868530154228 PEAK CID FTMS 0 0 0 -1 0 4 Unmodified _RKLLLLKLIK_ nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-4|ATRX;ENSG00000085224|ENST00000373344|ATRX 0.0 0.3961065659209837 2 {I|L}EENQR 6 -1 30.583 0.0 0.0 2.4726 0.0 0.0 199.4223123741088 265.0839022272094 464.5062146013182 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.3807196863200844 {I|L}EENQR 2.4726 - 97 + 1 2.121 70760.6 0.5699999928474426 1168 3155 4321 DOHH2_400M_050219_2,4325 DOHH2_400M_050219_2,4325,RKLLLLKLIK False False AELEENQRSY 21.740947 619.786853015423 646890.5 4321.0 nc|ENSG00000085224|P46100-5|ATRX;;nc|ENSG00000085224|P46100-3|ATRX;;nc|ENSG00000085224|P46100-2|ATRX;;nc|ENSG00000085224|P46100-4|ATRX;;ENSG00000085224|ENST00000373344|ATRX 7.867525100708008 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4326 21.745 239.0 460530.0 25 0 128000.0 + 8755 EVRKLRENL 9 82 578.8436053810059 1155.6726578288117 2 578.8437988162041 MULTI CID FTMS 0 0 0 4321 326900.9375 1.0 0 0.0 5 Unmodified _EVRKLRENL_ REV__ENSG00000126062|ENST00000266025|TMEM115 13.51866281300042 0.4707489171278811 2 {I|L}EAAK 5 -1 29.253 0.0 0.0 2.5312 0.0 0.0 0.0 640.3418062799436 640.3418062799436 13.05462187404089 0.0 0.0 0.0 0 0.6237125054200234 0.0 0.3807196863200844 0.0 {I|L}EAAK 2.5312 - 46 + 1 2.121 85736.8 1.0 1169 3155 4321 DOHH2_400M_050219_2,4326 DOHH2_400M_050219_2,4326,EVRKLRENL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4327 21.75 242.0 164820.0 25 0 9567.0 + 39742 VEKQDNETF 9 82 555.2596807620688 1108.5048085909375 2 555.2582275271416 MULTI CID FTMS 0 0 0 4321 130178.1875 0.9290496308793048 -2 0.0769023895263671 6 Unmodified _VEKQDNETF_ ENSG00000115165|ENST00000264192|CYTIP;ENST00000462109.1_1_2:158290860-158300532:-|nuORF 15.847184025352805 0.4077185912009129 2 {NN|[MP]|[D{I|L}]|[EV]}[HQ][WY]T{M(Oxidation (M))|F} 8 4 + 34.372 0.0 0.0 3.1008 3.1008 81.88 0.0 0.0 0.0 19.76789385964942 14.904630595263413 14.904630595263413 34.371987629411294 0 0.4247425010840047 1.6989700043360187 0.25 0.0 {NN|[MP]|[D{I|L}]|[EV]}[HQ][WY]T{M(Oxidation (M))|F} 3.1008 - 36 + 1 2.121 39568.6 1.0 1170 3155 4321 DOHH2_400M_050219_2,4327 DOHH2_400M_050219_2,4327,VEKQDNETF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4328 21.764 800.0 102180.0 25 0 8415.7 19331 LEMPIHPSP 9 115 510.7606114681965 1019.506670003193 2 510.7606384158134 MULTI CID FTMS 0 0 0 4321 103241.5234375 1.0 0 0.0 7 Unmodified _LEMPIHPSP_ ENST00000437099.6_1_17:9819253-9819832:-|nuORF 11.640296217721598 0.521594087909532 2 {I|L}{M(Oxidation (M))|F}TD 4 7 23.633 0.0 0.0 2.3181 0.0 0.0 0.0 540.2716768854124 540.2716768854124 7.791681396005998 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}{M(Oxidation (M))|F}TD 2.3181 - 200 + 1 2.121 66486.2 0.5199999809265137 1171 3155 4321 DOHH2_400M_050219_2,4328 DOHH2_400M_050219_2,4328,LEMPIHPSP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4330 21.78 800.0 192310.0 25 0 58207.0 11231 GEQGDIEPRRM 11 69 644.3098071679108 1286.6050614026217 2 644.3089477419853 MULTI CID FTMS 0 0 0 4329 119414.203125 0.8423868271026358 -2 0.1050529479980468 1 Unmodified _GEQGDIEPRRM_ ENSG00000145907|ENST00000356245|G3BP1 12.174745833636583 0.7818979005474666 2 {[DA]|[EG]}{I|L}M 4 7 19.693 0.0 0.0 1.5306 0.0 0.0 0.0 853.3924814067808 853.3924814067808 0.6124313711587348 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[DA]|[EG]}{I|L}M 1.5306 - 91 1 2.121 115807.9 0.5600000023841858 1172 3156 4329 DOHH2_400M_050219_2,4330 DOHH2_400M_050219_2,4330,GEQGDIEPRRM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4331 21.782 116.0 949170.0 25 0 81323.0 -1 0 49 832.7128375683322 2495.1166833051966 3 833.0475341677666 MULTI CID FTMS 0 0 0 4329 480390.21875 0.6653695718284212 -2 0.1050529479980468 2 2 DDR 3 -1 19.693 0.0 0.0 0.78925 0.0 0.0 1651.7492219209034 454.1885470026001 2105.9377689235034 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 DDR 0.78925 - 22 + 1 2.121 83481.0 1.0 1173 3156 4329 DOHH2_400M_050219_2,4331 DOHH2_400M_050219_2,4331, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4332 21.791 467.0 250130.0 25 0 25338.0 + 44348 YLQEKRNTL 9 101 582.822614893097 1163.630676852994 2 582.8221313357353 MULTI CID FTMS 0 0 0 4329 242113.765625 1.0 0 0.0 3 Unmodified _YLQEKRNTL_ ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-3|HEATR5B 51.629811660486645 0.0367964933207742 2 Y{I|L}QEK 5 4 78.756 0.0 0.0 6.7681 0.0 0.0 0.0 499.2644747369751 499.2644747369751 64.1516033102399 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.805462187404089 0.4247425010840047 + Y{I|L}QEK 6.7681 + + 199 + 1 2.121 90503.8 1.0 1174 3156 4329 DOHH2_400M_050219_2,4332 DOHH2_400M_050219_2,4332,YLQEKRNTL True True YLQEKRNTL 21.790582 582.822131335735 1108119.25 4329.0 ENSG00000008869|ENST00000233099|HEATR5B;;nc|ENSG00000008869|Q9P2D3-3|HEATR5B 2.791306853294373 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4333 21.797 368.0 284370.0 25 0 20856.0 + 45420 YTDGPGGSGQY 11 119 551.2277449694994 1100.4409370057988 2 551.2278320193291 MULTI CID FTMS 0 0 0 4329 88259.2421875 0.3140442529192549 -5 0.2014827728271484 4 Unmodified _YTDGPGGSGQY_ ENSG00000090975|ENST00000320201|PITPNM2;ENSG00000110697|ENST00000356404|PITPNM1;ENST00000451868.2_1_12:123484929-123519149:-|nuORF;nc|ENSG00000090975|Q9BZ72-2|PITPNM2;nc|ENSG00000110697|O00562-2|PITPNM1 26.268140514670165 0.4754186812857754 2 [YE]GSPN 6 8 36.247 0.0 0.0 3.2939 0.0 0.0 0.0 450.1613709259738 450.1613709259738 20.76274388132952 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.4247425010840047 0.0 [YE]GSPN 3.2939 - 316 1 2.121 86176.9 1.0 1175 3156 4329 DOHH2_400M_050219_2,4333 DOHH2_400M_050219_2,4333,YTDGPGGSGQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4334 21.803 330.0 568280.0 25 0 81624.0 -1 0 120 409.2183069037973 408.2110304371973 1 409.2193176150322 MULTI CID FTMS 0 0 0 4329 150970.0 0.6384727319488066 -1 0.06268310546875 5 2 HY 2 -1 16.198 0.0 0.0 3.968 0.0 0.0 90.0777904983474 0.0 90.0777904983474 0.0 3.723637474483468 0.0 0.0 0 0.0 0.0 0.0 0.0 HY 3.968 - 18 + 1 2.121 149238.6 1.0 1176 3156 4329 DOHH2_400M_050219_2,4334 DOHH2_400M_050219_2,4334, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4335 21.809 300.0 210960.0 25 0 40825.0 + 15765 ISDNVNKY 8 82 476.7405747843143 951.4665966354286 2 476.7403442263603 MULTI CID FTMS 0 0 0 4329 116594.59375 1.0 0 0.0 6 Unmodified _ISDNVNKY_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 20.453626601364224 0.6087503291685402 2 {I|L}S 2 6 39.693 0.0 0.0 4.1717 0.0 0.0 0.0 748.3263033502561 748.3263033502561 20.65166884247503 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + {I|L}S 4.1717 + + 45 + 1 2.121 56521.6 1.0 1177 3156 4329 DOHH2_400M_050219_2,4335 DOHH2_400M_050219_2,4335,ISDNVNKY False True ISDNVNKY 21.808684 476.74034422636 801770.3125 4329.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 4.494724909464519 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4337 21.815 188.0 386610.0 25 0 64962.0 + 34648 SPPPPPPPP 9 102 441.73977874298777 881.4650045527756 2 441.7396118044853 MULTI CID FTMS 0 0 0 4336 302810.09375 0.4513707292373637 4 -0.1241264343261718 1 Unmodified _SPPPPPPPP_ ENSG00000103479|ENST00000262133|RBL2;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENSG00000099999|ENST00000382363|RNF215;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000136754|Q8IZP0-8|ABI1;ENSG00000100312|ENST00000216139|ACR;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;ENSG00000139800|ENST00000267294|ZIC5;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000164944|Q69YN4-4|VIRMA;ENSG00000109920|ENST00000263773|FNBP4;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000260428|ENST00000567180|SCX;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000109920|Q8N3X1-2|FNBP4;ENSG00000274209|ENST00000620264|ANTXRL;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000136754|ENST00000376140|ABI1;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;ENSG00000107816|ENST00000454422|LZTS2;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;ENSG00000184863|ENST00000401878|RBM33;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217;nc|ENSG00000136754|Q8IZP0-12|ABI1 93.88341677533236 0.0134066622201488 2 [PS]PPPP[YK] 8 3 + 68.733 0.0 0.0 7.7976 7.7976 96.3 0.0 0.0 0.0 20.66946789630613 53.78485385398854 20.66946789630613 24.25968732272281 0 1.25 2.0 1.4049471895720984 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[PS][YK]P[YK];[YK]SPP[YK];{[HG]|PP}PSPP[YK];[PS]P[YK][YK];[YK]PSP[YK];{[HG]|PP}PPSP[YK];{[NV]|[RG]}[YV]P[YK];{[HG]|PP}S[YK][YK] 7.7976;5.0454;4.9962;4.8805;4.5832;3.7184;3.2367;2.9393;1.7571;0.96616 -;-;-;-;-;-;-;-;-;- 165 1 2.121 59116.9 1.0 1178 3157 4336 DOHH2_400M_050219_2,4337 DOHH2_400M_050219_2,4337,SPPPPPPPP False False SPPPPPPPP 21.81539 441.739611804485 23626264.5 4336.0 ENSG00000103479|ENST00000262133|RBL2;;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;;ENSG00000099999|ENST00000382363|RNF215;;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;;nc|ENSG00000136754|Q8IZP0-8|ABI1;;ENSG00000100312|ENST00000216139|ACR;;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;;nc|ENSG00000136754|Q8IZP0-7|ABI1;;nc|ENSG00000136754|Q8IZP0-10|ABI1;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000136754|Q8IZP0-11|ABI1;;nc|ENSG00000136754|Q8IZP0-3|ABI1;;ENSG00000139800|ENST00000267294|ZIC5;;nc|ENSG00000136754|Q8IZP0-5|ABI1;;nc|ENSG00000164944|Q69YN4-4|VIRMA;;ENSG00000109920|ENST00000263773|FNBP4;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000260428|ENST00000567180|SCX;;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;;nc|ENSG00000109920|Q8N3X1-2|FNBP4;;ENSG00000274209|ENST00000620264|ANTXRL;;nc|ENSG00000136754|Q8IZP0-4|ABI1;;nc|ENSG00000136754|Q8IZP0-6|ABI1;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA;;ENSG00000136754|ENST00000376140|ABI1;;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;;ENSG00000107816|ENST00000454422|LZTS2;;nc|ENSG00000136754|Q8IZP0-2|ABI1;;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;;ENSG00000184863|ENST00000401878|RBM33;;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;;ENSG00000126461|ENST00000360565|SCAF1;;ENSG00000127666|ENST00000248244|TICAM1;;nc|ENSG00000136754|Q8IZP0|ABI1;;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;;ENSG00000120549|ENST00000376454|KIAA1217;;nc|ENSG00000136754|Q8IZP0-12|ABI1 5.740121682484944 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4338 21.824 486.0 207510.0 25 0 49187.0 -1 MSSSVVCTF 9 110 530.2276873324553 1058.4408217317105 2 530.2276489138603 MULTI CID FTMS 0 0 0 4336 96460.2734375 0.0967745487846782 5 -0.1587905883789062 2 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))MSSSVVC(Carbamidomethyl (C))TF_ ENST00000440928.5_1_1:240938871-240938988:-|nuORF 11.640296217721598 0.521594087909532 2 [HD]EAQQNA{M(Oxidation (M))|F} 9 -1 + 81.973 0.0 0.0 7.7447 7.7447 91.974 0.0 0.0 0.0 15.38673012463569 67.99349368937584 15.38673012463569 9.208187539523747 0 0.8807196863200843 0.8239087409443188 0.7302046884880937 0.0 [HD]EAQQNA{M(Oxidation (M))|F};[HD]EAQQGGA{M(Oxidation (M))|F};[HD]EAQ[AG]NA{M(Oxidation (M))|F};[HD]EA[AG]QNA{M(Oxidation (M))|F};[HD]EA[AG][AG]NA{M(Oxidation (M))|F};[HD]EA[AG]QGGA{M(Oxidation (M))|F};[HD]EAQ[AG]GGA{M(Oxidation (M))|F};[C(Carbamidomethyl (C))H][WP]QNA{M(Oxidation (M))|F};[HD]{I|L}{I|L}DDNA{M(Oxidation (M))|F};[MT]{[DS]|[MA]|[CV]|TT}HHNA{M(Oxidation (M))|F} 7.7447;6.8747;6.8747;6.8747;6.0089;6.0089;6.0089;3.324;3.1358;3.1197 -;-;-;-;-;-;-;-;-;- 275 1 2.121 82343.1 1.0 1179 3157 4336 DOHH2_400M_050219_2,4338 DOHH2_400M_050219_2,4338,MSSSVVCTF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4340 21.828 101.0 816830.0 25 0 69392.0 + 11232 GEQGDIEPRRM 11 82 429.8752177040509 0 429.8751098513603 PEAK CID FTMS 0 0 0 4339 317224.34375 0.8715747655607395 2 -0.0956592559814453 1 Unmodified _GEQGDIEPRRM_ ENSG00000145907|ENST00000356245|G3BP1 22.65808497894818 0.3196792570773988 2 E 1 10 5.4846 0.0 0.0 0.63942 0.0 0.0 187.4101511290017 538.2514742486936 725.6616253776954 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.63942 + + 8 + 1 2.121 73284.5 1.0 1180 3158 4339 DOHH2_400M_050219_2,4340 DOHH2_400M_050219_2,4340,GEQGDIEPRRM False True GEQGDIEPRRM 21.828461 429.87510985136 2506204.25 4339.0 ENSG00000145907|ENST00000356245|G3BP1 5.702300548553467 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4341 21.842 800.0 193660.0 25 0 33535.0 42252 VSNIPIELLG 10 142 527.809481070898 1053.6044092085958 2 527.8098632693291 MULTI CID FTMS 0 0 0 4339 86496.2109375 0.9112945303388688 1 -0.089029312133789 2 Unmodified _VSNIPIELLG_ ENSG00000172817|ENST00000310193|CYP7B1 12.240655878213236 0.6421556946785427 2 Y 1 10 14.604 0.0 0.0 1.3861 0.0 0.0 872.5298680482427 0.0 872.5298680482427 0.0 3.634993639681312 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3861 - 229 + 1 2.121 122864.4 0.550000011920929 1181 3158 4339 DOHH2_400M_050219_2,4341 DOHH2_400M_050219_2,4341,VSNIPIELLG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4342 21.856 800.0 169940.0 25 0 19286.0 + 10342 FSETGGGEKY 10 148 537.7401400583703 1073.4657271835406 2 537.7399169802666 MULTI CID FTMS 0 0 0 4339 108649.4296875 0.9183570414368264 1 -0.089029312133789 3 Unmodified _FSETGGGEKY_ ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 53.31671820480216 0.0606844387689228 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}{M(Oxidation (M))|F}TESE 9 7 + 86.905 0.0 0.0 8.0957 8.0957 94.953 0.0 0.0 0.0 14.277034080690356 14.277034080690356 14.277034080690356 14.277034080690356 0 0.2396518287104437 2.0 1.9436726795685344 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}{M(Oxidation (M))|F}TESE;{M(Oxidation (M))|F}SETGNEKY;{M(Oxidation (M))|F}SETNGEKY;{M(Oxidation (M))|F}SETGGGEKY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}ET{M(Oxidation (M))|F}SE;{M(Oxidation (M))|F}SET{M(Oxidation (M))|F}{I|L}DC{I|L};{[DA]|[EG]}Y{I|L}{M(Oxidation (M))|F}TESE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}{M(Oxidation (M))|F}[DP]S{M(Oxidation (M))|F};[YG]E{I|L}{M(Oxidation (M))|F}TESE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}ETES{M(Oxidation (M))|F} 8.0957;6.7658;6.692;6.6494;6.1402;5.8945;5.8292;5.8053;5.7128;5.7117 -;-;-;+;-;-;-;-;-;- + 1960 1 2.121 109949.9 0.5899999737739563 1182 3158 4339 DOHH2_400M_050219_2,4342 DOHH2_400M_050219_2,4342,FSETGGGEKY True True FSETGGGEKY 21.856125 537.739916980267 528510.8125 4339.0 ENSG00000187240|ENST00000375735|DYNC2H1;;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 7.568704922993978 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4343 21.87 800.0 129230.0 25 0 30041.0 -1 0 62 1149.9480620444351 2297.8815711556704 2 1149.946704089642 MULTI CID FTMS 0 0 0 4339 104631.96875 0.5344524055380777 -1 0.0152816772460937 4 2 {[QG]|[NA]}{[QN]|[E{I|L}]|[KN]}GTMWMA 10 -1 34.078 0.0 0.0 1.483 0.0 0.0 0.0 1190.3830109352205 1190.3830109352205 23.033504132662586 0.0 0.0 0.0 0 0.0 0.0 1.0 1.1549471895720984 {[QG]|[NA]}{[QN]|[E{I|L}]|[KN]}GTMWMA 1.483 - 547 1 2.121 76120.7 0.4399999976158142 1183 3158 4339 DOHH2_400M_050219_2,4343 DOHH2_400M_050219_2,4343, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4344 21.884 800.0 85259.0 25 0 1756.9 -1 0 64 976.1050609150138 3900.391137793655 4 976.3551513552666 MULTI CID FTMS 0 0 0 4339 98335.3984375 0.4251368335410785 -7 0.261688232421875 5 2 K 1 -1 1.5938 0.0 0.0 0.040862 0.0 0.0 2892.276710158693 876.9790133111936 3769.255723469887 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.040862 - 7 + 1 2.121 50726.4 0.4799999892711639 1184 3158 4339 DOHH2_400M_050219_2,4344 DOHH2_400M_050219_2,4344, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4345 21.898 800.0 233650.0 25 0 8304.6 -1 0 91 636.7825287180669 2543.101009005868 4 637.0338622927666 MULTI CID FTMS 0 0 0 4339 93983.296875 0.6341675024805564 -3 0.1228885650634765 6 2 DTSGY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SY 9 -1 36.348 0.0 0.0 1.4293 0.0 0.0 1457.708749339655 0.0 1457.708749339655 0.0 14.82061891068249 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 DTSGY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SY 1.4293 - 218 + 1 2.121 140417.3 0.6000000238418579 1185 3158 4339 DOHH2_400M_050219_2,4345 DOHH2_400M_050219_2,4345, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4346 21.913 800.0 96890.0 25 0 6613.3 -1 0 69 838.3774446080333 2512.1105044243 3 838.7115356326103 MULTI CID FTMS 0 0 0 4339 77905.3828125 1.0 0 0.0 7 2 {M(Oxidation (M))|F}S{I|L}EA{[WS]|[C(Carbamidomethyl (C)){I|L}]} 7 -1 39.789 0.0 0.0 1.5839 0.0 0.0 1673.7291090159 0.0 1673.7291090159 0.0 28.5522513203544 0.0 0.0 0 0.0 0.0 1.2834281652289512 0.0 {M(Oxidation (M))|F}S{I|L}EA{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.5839 - 176 + 1 2.121 61760.4 0.5099999904632568 1186 3158 4339 DOHH2_400M_050219_2,4346 DOHH2_400M_050219_2,4346, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4348 21.918 26.0 6834700.0 25 0 660930.0 -1 0 58 624.7864419211343 2495.116661818137 4 625.0375854372978 MULTI CID FTMS 0 0 0 4347 3301166.0 0.7534289736044948 1 -0.0066299438476562 1 2 DD 2 -1 24.776 0.0 0.0 0.99299 0.0 0.0 728.3377833429314 1533.7037950636268 2262.041578406558 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 DD 0.99299 - 18 + 1 2.11 135181.1 1.0 1187 3159 4347 DOHH2_400M_050219_2,4348 DOHH2_400M_050219_2,4348, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4349 21.92 99.0 583470.0 25 0 94479.0 + 38239 TPVHAFVV 8 91 435.24580476917606 868.4770566051521 2 435.2455016970634 MULTI CID FTMS 0 0 0 4347 338784.8125 0.111543816864367 4 -0.0777587890625 2 Unmodified _TPVHAFVV_ REV__ENST00000391834.6_1_19:50372434-50372704:-|nuORF 15.768221252438446 0.6779680726941459 2 PT 2 -1 44.464 0.0 0.0 5.1198 0.0 0.0 0.0 667.3548219821058 667.3548219821058 32.47425010840047 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 PT 5.1198 - 83 + 1 2.11 49076.5 1.0 1188 3159 4347 DOHH2_400M_050219_2,4349 DOHH2_400M_050219_2,4349,TPVHAFVV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4351 21.924 14.0 2995300.0 25 0 131440.0 + -1 CLCFAPCIAF 10 77 629.7757253405404 1257.5368977478806 2 629.7759887576103 MULTI CID FTMS 0 0 0 4350 3795096.75 0.4117022820742887 -4 0.1558647155761718 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 18.13498045792455 0.5432546531930572 2 [QA]HDEAGANQA{M(Oxidation (M))|F} 12 -1 + 93.868 0.0 0.0 7.4644 7.4644 83.952 0.0 0.0 0.0 7.491596866368013 58.39185045528197 7.491596866368013 3.0102999566398125 0 1.0 0.0 0.75 0.805462187404089 [QA]HDEAGANQA{M(Oxidation (M))|F};[QA]HDEAGAQNA{M(Oxidation (M))|F};[QA]HDEAQNQA{M(Oxidation (M))|F};[QA]HDEAGAN[AG]A{M(Oxidation (M))|F};[QA]HDEAGAGGQA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEQANQA{M(Oxidation (M))|F};[QA]HDEAGA[AG]NA{M(Oxidation (M))|F};[QA]HDEAGAQGGA{M(Oxidation (M))|F};[QA]HDEQAQNA{M(Oxidation (M))|F} 7.4644;7.2251;6.9387;6.7409;6.7409;6.6993;6.68;6.5016;6.5016;6.4406 -;-;-;-;-;-;-;-;-;- 3614 1 2.11 37779.2 1.0 1189 3160 4350 DOHH2_400M_050219_2,4351 DOHH2_400M_050219_2,4351,CLCFAPCIAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4352 21.925 28.0 1368800.0 25 0 125600.0 + + -1 STDTSGYGQSSY 12 69 626.7518843709418 1251.4892158086834 2 626.7520019412041 MULTI CID FTMS 0 0 0 4350 2135480.25 0.8227625698324023 -1 0.0066299438476562 2 Carbamidomethyl (C) _TSHYTC(Carbamidomethyl (C))SFSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 10.823927491677226 0.6659270209832991 2 HSSY 4 -1 33.047 0.0 0.0 2.6406 0.0 0.0 759.2920550194241 0.0 759.2920550194241 0.0 14.244018128452822 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 HSSY 2.6406 - 350 + 1 2.11 34970.8 1.0 1190 3160 4350 DOHH2_400M_050219_2,4352 DOHH2_400M_050219_2,4352,TSHYTCSFSY False False STDTSGYGQSSY 21.925298 626.7523 38872152.0 4350.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 6.575143814086914 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4353 21.929 196.0 361640.0 25 0 43937.0 + 35567 STQMTITTQK 10 99 569.7914425611614 1137.5683321891229 2 569.7926513552666 MULTI CID FTMS 0 0 0 4350 300069.84375 0.3074568992926871 -4 0.1558647155761718 3 Unmodified _STQMTITTQK_ ENSG00000181143|ENST00000397910|MUC16 61.08992128646608 0.0337271188422265 2 {[MG]|[TS]}QMT{I|L}TTQK 10 0 + 64.662 0.0 0.0 5.6842 5.6842 85.081 0.0 0.0 0.0 43.74517333727314 15.684241749313472 15.684241749313472 9.164539485499247 0 0.805462187404089 0.0 0.5 0.8522338482433752 + + {[MG]|[TS]}QMT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}TT[AG]K;{[MG]|[TS]}[AG]MT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}T[KS]AA;{[MG]|[TS]}[AG]MT{I|L}TT[AG]K;{[MG]|[TS]}QMT{I|L}[YV]VP;{[MG]|[TS]}[AG]MT{I|L}T[KS]AA;{[MG]|[TS]}[AG]MT{I|L}[YV]VP;{[MG]|[TS]}Q[RH]A{[QV]|[N{I|L}]|[RA]|[KV]}DP;{[MG]|[TS]}Q[RH][W{I|L}]NP 5.6842;4.8786;4.8786;4.1389;4.0761;3.6656;3.3364;2.5253;1.5195;1.5132 +;-;-;-;-;-;-;-;-;- + 323 + 1 2.11 59048.1 1.0 1191 3160 4350 DOHH2_400M_050219_2,4353 DOHH2_400M_050219_2,4353,STQMTITTQK True True STQMTITTQK 21.929058 569.792651355267 9502864.0 4350.0 ENSG00000181143|ENST00000397910|MUC16 9.360153198242188 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4354 21.933 199.0 575380.0 25 0 54123.0 + + 44034 YLKSKGAEI 9 126 504.7894895732505 1007.564426213301 2 504.7896606326103 MULTI CID FTMS 0 0 0 4350 277522.96875 0.7837076948696016 1 -0.0131855010986328 4 Unmodified _YIIKGSSQI_ ENST00000531186.5_1_11:32605433-32610279:+|nuORF;ENSG00000149100|ENST00000531120|EIF3M 36.12702656103203 0.0967173616627612 2 Y{I|L}KS 4 -1 59.725 0.0 0.0 5.9276 0.0 0.0 0.0 513.2684420221311 513.2684420221311 46.96058736679344 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.3807196863200844 Y{I|L}KS 5.9276 - 282 + 1 2.11 89184.9 1.0 1192 3160 4350 DOHH2_400M_050219_2,4354 DOHH2_400M_050219_2,4354,YIIKGSSQI False False YLKSKGAEI 21.932848 504.78966063261 1526862.0 4350.0 ENST00000531186.5_1_11:32605433-32610279:+|nuORF;;ENSG00000149100|ENST00000531120|EIF3M 3.037403424580892 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4356 21.938 126.0 373880.0 25 0 48479.0 32909 SEIPSSDPPT 10 71 515.2401584812715 1028.4657640293428 2 515.2397949099541 MULTI CID FTMS 0 0 0 4355 298426.65625 0.7562022917008653 -2 0.019815444946289 1 Unmodified _SEIPSSDPPT_ ENSG00000113273|ENST00000264914|ARSB;ENST00000521011.1_1_5:78076222-78079308:-|nuORF 13.042465956692816 0.6287021003332052 2 TY 2 10 20.969 0.0 0.0 2.0389 0.0 0.0 746.343432341646 0.0 746.343432341646 0.0 3.0642502755068755 0.0 0.0 0 0.0 0.0 0.0 0.0 TY 2.0389 - 56 + 1 2.11 43730.8 1.0 1193 3161 4355 DOHH2_400M_050219_2,4356 DOHH2_400M_050219_2,4356,SEIPSSDPPT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4357 21.942 212.0 255520.0 25 0 12453.0 + 24069 LYDSQCGSPFA 11 117 594.2564945983788 1186.4984362635576 2 594.2580444216728 MULTI CID FTMS 0 0 0 4355 142665.171875 0.3247882605457097 4 -0.1252174377441406 2 Unmodified _LYDSQCGSPFA_ REV__ENST00000522969.1_1_8:1808097-1817553:+|nuORF 13.042465956692816 0.7638483625850725 2 {[QG]|[NA]}G[HS]NQQ 8 -1 29.539 0.0 0.0 2.4896 0.0 0.0 0.0 347.1355571954513 347.1355571954513 13.34151111802391 0.0 0.0 0.0 0 0.0 1.0 1.0189301784845295 1.055462187404089 {[QG]|[NA]}G[HS]NQQ 2.4896 - 289 1 2.11 46264.5 1.0 1194 3161 4355 DOHH2_400M_050219_2,4357 DOHH2_400M_050219_2,4357,LYDSQCGSPFA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4358 21.949 417.0 243720.0 25 0 20376.0 + 31382 RNVSTGDVNVE 11 115 595.2940101530239 1188.5734673728475 2 595.2940551638603 MULTI CID FTMS 0 0 0 4355 225484.6875 1.0 0 0.0 3 Unmodified _RNVSTGDVNVE_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 32.89776655970281 0.3218023389984559 2 {[NV]|[RG]}RST[DG]NVVE 11 4 + 56.917 0.0 0.0 4.7887 4.7887 71.564 0.0 0.0 0.0 4.259687322722812 4.259687322722812 4.259687322722812 0.4845500650402812 0 0.9247425010840048 0.0 0.2742275032520141 0.6747425010840047 {[NV]|[RG]}RST[DG]NVVE;{[NV]|[RG]}RST[DG]VNVE;{M(Oxidation (M))|F}VVN[DG]{M(Oxidation (M))|F}KTY;{M(Oxidation (M))|F}VNV[DG]{M(Oxidation (M))|F}KTY;[KG]RDT[DG]NVVE;[KG]RDT[DG]VNVE;{[NV]|[RG]}RST[RD]NVE;{M(Oxidation (M))|F}VVNR[YQ]TY;{M(Oxidation (M))|F}VNVR[YQ]TY;{[NV]|[RG]}RST[DG]GGVVE 4.7887;4.7479;4.4303;4.3895;4.3625;4.3217;4.1947;4.1247;4.084;4.0206 -;-;-;-;-;-;-;-;-;- 847 1 2.11 81297.1 1.0 1195 3161 4355 DOHH2_400M_050219_2,4358 DOHH2_400M_050219_2,4358,RNVSTGDVNVE False True RNVSTGDVNVE 21.949129 595.29405516386 972618.625 4355.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 8.468586126963297 2.0 True 11.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 4359 21.956 362.0 315760.0 25 0 17722.0 + 24330 MEGKINKQL 9 132 530.7950323174872 1059.5755117017743 2 530.7953369021416 MULTI CID FTMS 0 0 0 4355 213084.046875 1.0 0 0.0 4 Unmodified _MEGKINKQL_ ENSG00000055044|ENST00000264279|NOP58;ENST00000472050.5_1_2:203130664-203149064:+|nuORF;ENST00000478941.1_1_2:203147084-203155055:+|nuORF;ENST00000488403.5_1_2:203130664-203149205:+|nuORF 71.70789743142352 0.0204387454931768 2 MEGK{I|L}NKQ{I|L} 9 0 + 59.088 0.0 0.0 5.5765 5.5765 77.658 0.0 0.0 0.0 20.658103586936456 5.428418131619992 5.428418131619992 2.759373593845908 0 2.298938631448328 2.0 0.3494850021680094 1.024227503252014 + + MEGK{I|L}NKQ{I|L};ME{I|L}[W{I|L}]KQ{I|L};MEGK{I|L}NK{I|L}Q;ME{I|L}[W{I|L}]K{I|L}Q;ME{I|L}[W{I|L}]K[AG]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GK{I|L}NKQ{I|L};{I|L}EM[W{I|L}]KQ{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NP]{I|L}NKQ{I|L};[WR]C{I|L}NKQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GK{I|L}GGKQ{I|L} 5.5765;5.3161;5.0642;4.8038;4.1121;3.6269;3.2105;2.9888;2.8856;2.7578 +;-;-;-;-;+;-;-;-;- + 869 + 1 2.11 87187.8 1.0 1196 3161 4355 DOHH2_400M_050219_2,4359 DOHH2_400M_050219_2,4359,MEGKINKQL True True MEGKINKQL 21.955654 530.795336902142 827639.875 4355.0 ENST00000472050.5_1_2:203130664-203149064:+|nuORF;;ENSG00000055044|ENST00000264279|NOP58;;ENST00000488403.5_1_2:203130664-203149205:+|nuORF;;ENST00000478941.1_1_2:203147084-203155055:+|nuORF 1.206813891728719 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4360 21.967 681.0 189230.0 25 0 22528.0 + + 16060 AALREKTSL 9 126 494.7932730359457 987.5719931386914 2 494.7934753298759 MULTI CID FTMS 0 0 0 4355 119634.671875 1.0 0 0.0 5 Unmodified _ITLRQGTVT_ nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR;nc|ENSG00000072571|O75330-2|HMMR;ENST00000517936.1_1_5:162887680-162896865:+|nuORF;ENSG00000072571|ENST00000393915|HMMR 18.1463463914782 0.3454829746528889 2 EKTS{I|L} 5 -1 33.22 0.0 0.0 3.3638 0.0 0.0 411.2488173794962 0.0 411.2488173794962 0.0 20.841930790475978 0.0 0.0 0 0.7302046884880938 0.0 0.0 0.0 EKTS{I|L} 3.3638 - 84 1 2.11 104553.6 1.0 1197 3161 4355 DOHH2_400M_050219_2,4360 DOHH2_400M_050219_2,4360,ITLRQGTVT False False AALREKTSL 21.967479 494.793475329876 567847.3125 4355.0 nc|ENSG00000072571|O75330-4|HMMR;;nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;ENST00000517936.1_1_5:162887680-162896865:+|nuORF;;ENSG00000072571|ENST00000393915|HMMR 3.140383720397949 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4362 21.974 117.0 505690.0 25 0 39210.0 + 36764 TEDIQTRQY 9 82 577.2783831795753 1152.5422134259504 2 577.2779418826103 MULTI CID FTMS 0 0 0 4361 542477.8125 0.3089164625112761 4 -0.1734352111816406 1 Unmodified _TEDIQTRQY_ ENSG00000096063|ENST00000373825|SRPK1;ENSG00000135250|ENST00000393651|SRPK2;ENSG00000184343|ENST00000370101|SRPK3;ENST00000507292.1_1_6:35824956-35836900:-|nuORF;nc|ENSG00000096063|Q96SB4-3|SRPK1;nc|ENSG00000096063|Q96SB4-4|SRPK1;nc|ENSG00000135250|P78362|SRPK2;nc|ENSG00000184343|Q9UPE1-2|SRPK3;nc|ENSG00000184343|Q9UPE1-3|SRPK3;nc|ENSG00000184343|Q9UPE1-4|SRPK3 61.60191391372663 0.0251951588191061 2 TED{I|L}QT 6 3 85.706 0.0 0.0 7.4363 0.0 0.0 0.0 462.2097567193969 462.2097567193969 68.79152766893085 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.8494850021680094 + TED{I|L}QT 7.4363 + + 123 + 1 2.098 51523.0 1.0 1198 3162 4361 DOHH2_400M_050219_2,4362 DOHH2_400M_050219_2,4362,TEDIQTRQY True True TEDIQTRQY 21.973508 577.27794188261 8223226.0 4361.0 nc|ENSG00000184343|Q9UPE1-2|SRPK3;;ENSG00000135250|ENST00000393651|SRPK2;;nc|ENSG00000096063|Q96SB4-3|SRPK1;;nc|ENSG00000096063|Q96SB4-4|SRPK1;;nc|ENSG00000135250|P78362|SRPK2;;ENSG00000096063|ENST00000373825|SRPK1;;ENSG00000184343|ENST00000370101|SRPK3;;nc|ENSG00000184343|Q9UPE1-4|SRPK3;;ENST00000507292.1_1_6:35824956-35836900:-|nuORF;;nc|ENSG00000184343|Q9UPE1-3|SRPK3 7.152054627736409 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4363 21.977 176.0 410680.0 25 0 49926.0 + 10379 FSQQIFEY 8 96 531.2485387594572 1060.4825245857144 2 531.2485839724541 MULTI CID FTMS 0 0 0 4361 104994.90625 0.6796472783155096 -2 0.0478496551513671 2 Unmodified _FSQQIFEY_ REV__ENSG00000144285|ENST00000674923|SCN1A;REV__nc|ENSG00000144285|P35498-2|SCN1A;REV__nc|ENSG00000144285|P35498-3|SCN1A 23.1484247019978 0.5573009939494978 2 ESE 3 -1 33.06 0.0 0.0 3.1174 0.0 0.0 697.339879680072 0.0 697.339879680072 0.0 17.222250883656855 0.0 0.0 0 0.2614393726401688 0.0 0.4247425010840047 0.0 ESE 3.1174 - 126 1 2.098 58717.3 1.0 1199 3162 4361 DOHH2_400M_050219_2,4363 DOHH2_400M_050219_2,4363,FSQQIFEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4364 21.991 800.0 267630.0 25 0 40374.0 + 20167 LKQRLPELG 9 157 527.3245740719254 1052.6345952106508 2 527.3235961794853 MULTI CID FTMS 0 0 0 4361 95592.5546875 0.5586439173938123 -2 0.0478496551513671 3 Unmodified _LKQRLPELG_ REV__ENSG00000237412|ENST00000617714|PRSS56 7.289230182591677 0.6602208344931196 2 {NN|[MP]|[D{I|L}]|[EV]}[KG]{I|L}[SG]TPK 10 -1 33.303 0.0 0.0 3.1637 0.0 0.0 0.0 53.03882258615957 53.03882258615957 19.32322582862316 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.6549471895720985 {NN|[MP]|[D{I|L}]|[EV]}[KG]{I|L}[SG]TPK 3.1637 - 365 1 2.098 166543.7 0.5199999809265137 1200 3162 4361 DOHH2_400M_050219_2,4364 DOHH2_400M_050219_2,4364,LKQRLPELG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4366 21.995 24.0 2706400.0 25 0 248700.0 + 11072 GEASRLAHY 9 71 502.25107931809913 1002.4876057029984 2 502.2513610720634 MULTI CID FTMS 0 0 0 4365 2299038.0 0.2126309776849373 5 -0.2488994598388672 1 Unmodified _GEASRLAHY_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000369385.5_1_1:149814728-149815097:+|nuORF;ENST00000465850.1_1_3:113822098-113822344:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;nc|ENSG00000220323|Q6DRA6|H2BC19P;nc|ENSG00000261716|Q6DN03|H2BC20P 40.23920728925047 0.0741434193262949 2 {[DA]|[EG]}[WK]{I|L}AHY 8 3 + 50.653 0.0 0.0 5.0528 5.0528 79.304 0.0 0.0 0.0 19.74932183384788 16.30810145492795 16.30810145492795 5.893170903024725 0 1.2059771852360797 1.3979400086720375 0.0 0.0 {[DA]|[EG]}[WK]{I|L}AHY;{[DA]|[EG]}A[K{I|L}]WHY;{[WN]|[YH]}{[TV]|[{I|L}S]}{I|L}AHY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[K{I|L}]DAHY;{[DA]|[EG]}[WK]{I|L}W{[QG]|[NA]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[K{I|L}]WHY;Y[EP]{I|L}[YR]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}[NS]HY;{[DA]|[EG]}A{I|L}{I|L}[C(Carbamidomethyl (C))R]{[QG]|[NA]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[K{I|L}]WD{[QG]|[NA]} 5.0528;4.4649;2.9782;2.2147;2.1835;2.0513;1.6658;1.3242;0.87535;0.32016 -;-;-;-;-;-;-;-;-;- 132 1 2.098 53237.0 1.0 1201 3163 4365 DOHH2_400M_050219_2,4366 DOHH2_400M_050219_2,4366,GEASRLAHY True True GEASRLAHY 21.995247 502.251361072063 95704776.0 4365.0 ENSG00000277224|ENST00000356530|H2BC7;;ENSG00000274641|ENST00000616182|H2BC17;;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;;ENST00000465850.1_1_3:113822098-113822344:-|nuORF;;ENSG00000273802|ENST00000541790|H2BC8;;ENSG00000274290|ENST00000614097|H2BC6;;nc|ENSG00000203814|Q5QNW6-2|H2BC18;;ENSG00000203814|ENST00000369167|H2BC18;;ENSG00000233822|ENST00000612898|H2BC15;;ENSG00000276410|ENST00000615966|H2BC3;;ENSG00000124635|ENST00000339812|H2BC11;;nc|ENSG00000220323|Q6DRA6|H2BC19P;;ENSG00000275713|ENST00000619466|H2BC9;;nc|ENSG00000261716|Q6DN03|H2BC20P;;ENST00000369385.5_1_1:149814728-149815097:+|nuORF;;ENSG00000158373|ENST00000377777|H2BC5;;ENSG00000273703|ENST00000621112|H2BC14;;ENSG00000278588|ENST00000377733|H2BC10;;ENSG00000180596|ENST00000396984|H2BC4;;ENSG00000197903|ENST00000356950|H2BC12;;ENSG00000184678|ENST00000369155|H2BC21 5.815556526184082 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4367 22.009 773.0 244420.0 25 0 59977.0 23063 LSLLARGKK 9 139 493.3294324364758 0 493.3292114138603 PEAK CID FTMS 0 0 0 4365 109353.4609375 1.0 0 0.0 2 Unmodified _LSLLARGKK_ ENST00000370355.2_1_10:102121227-102121431:+|nuORF 25.399314129420983 0.152124705672316 2 T 1 9 13.539 0.0 0.0 1.375 0.0 0.0 230.1629811080637 650.410956197386 880.5739373054496 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 T 1.375 - 47 + 1 2.098 146735.6 1.0 1202 3163 4365 DOHH2_400M_050219_2,4367 DOHH2_400M_050219_2,4367,LSLLARGKK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4369 22.013 44.0 1428300.0 25 0 197890.0 + 26882 PDFALASPQY 10 72 554.7676000574122 1107.5206471816243 2 554.7675048708916 MULTI CID FTMS 0 0 0 4368 1431169.125 0.5419088157785502 -2 0.0410652160644531 1 Unmodified _PDFALASPQY_ REV__ENSG00000164506|ENST00000321680|STXBP5;REV__nc|ENSG00000164506|Q5T5C0-2|STXBP5;REV__nc|ENSG00000164506|Q5T5C0-3|STXBP5 43.85829265575387 0.1168243637355526 2 ESSPQY 6 -1 45.208 0.0 0.0 4.0819 0.0 0.0 398.2286854474625 0.0 398.2286854474625 0.0 34.50486518677451 0.0 0.0 0 1.0682503180159344 0.0 0.8494850021680094 0.0 ESSPQY 4.0819 - 109 1 2.098 55694.4 1.0 1203 3164 4368 DOHH2_400M_050219_2,4369 DOHH2_400M_050219_2,4369,PDFALASPQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4370 22.015 114.0 773910.0 25 0 78068.0 + 34874 SQGFSHSQM 9 109 504.7137858942458 1007.4130188552916 2 504.7137023806572 MULTI CID FTMS 0 0 0 4368 481444.8125 0.6570758479032834 -1 0.0177860260009765 2 Unmodified _SQGFSHSQM_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 43.77239144664712 0.0547478964384323 2 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QMQS 9 4 + 48.301 0.0 0.0 4.7946 4.7946 71.538 0.0 0.0 0.0 18.59453090053101 35.53671350504206 18.59453090053101 0.4575749056067479 0 0.5 0.9208187539523752 0.8778623208748889 0.3252574989159953 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QMQS;{[QS]|[NT]}{[WN]|[YH]}QMQS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]MQS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QM[AG]S;{[QS]|[NT]}{[WN]|[YH]}[AG]MQS;{[QS]|[NT]}{[WN]|[YH]}QM[AG]S;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PA]SQMQS;{[QS]|[NT]}[RN]{[C(Carbamidomethyl (C))E]|[WC]}QS;{[ES]|[DT]|[{I|L}C]}[DP]SQMQS;{[QS]|[NT]}[HS]W[YN]S 4.7946;4.7491;3.8805;3.8805;3.8297;3.8297;2.4942;2.4271;2.2993;2.179 -;-;-;-;-;-;-;-;-;- 398 1 2.098 74271.0 1.0 1204 3164 4368 DOHH2_400M_050219_2,4370 DOHH2_400M_050219_2,4370,SQGFSHSQM True True SQGFSHSQM 22.015412 504.713702380657 3321016.0 4368.0 ENSG00000181143|ENST00000397910|MUC16 0.9932601849238076 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4371 22.029 800.0 215820.0 25 0 28201.0 + 24063 LYCDVCPKTCK 11 106 722.3249977257143 1442.6354425182285 2 722.3244506716728 MULTI CID FTMS 0 0 0 4368 203419.171875 0.3512197163054443 -2 0.0410652160644531 3 3 Carbamidomethyl (C) _LYC(Carbamidomethyl (C))DVC(Carbamidomethyl (C))PKTC(Carbamidomethyl (C))K_ ENSG00000185250|ENST00000521072|PPIL6;ENST00000524031.1_1_6:109739377-109752485:-|nuORF;nc|ENSG00000185250|Q8IXY8-2|PPIL6;nc|ENSG00000185250|Q8IXY8-3|PPIL6 57.72198328787511 0.0783903820882629 2 Y{I|L}C(Carbamidomethyl (C))DNQDT{I|L}SSK 12 9 + 140.98 0.0 0.0 9.7722 9.7722 92.395 0.0 0.0 0.0 83.51985422031959 15.859239445306244 15.859239445306244 9.098233696509112 0 1.0501648626366045 2.0 1.610924374808178 1.4291746928241125 Y{I|L}C(Carbamidomethyl (C))DNQDT{I|L}SSK;Y{I|L}C(Carbamidomethyl (C))DN[AG]DT{I|L}SSK;Y{I|L}[CG]DNQDT{I|L}SSK;Y{I|L}C(Carbamidomethyl (C))DGGQDT{I|L}SSK;Y{I|L}[CG]DGGQDT{I|L}SSK;Y{I|L}C(Carbamidomethyl (C))DGG[AG]DT{I|L}SSK;Y{I|L}[CG]DN[AG]DT{I|L}SSK;Y{I|L}C(Carbamidomethyl (C))DD{[QN]|[E{I|L}]|[KN]}T{I|L}SSK;[C(Carbamidomethyl (C))D]NQDT{I|L}[R{M(Oxidation (M))|F}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[DN]C(Carbamidomethyl (C))QDT{I|L}[R{M(Oxidation (M))|F}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 9.7722;9.1415;9.1415;9.1415;8.5126;8.5126;8.5126;5.7851;1.6529;1.4442 -;-;-;-;-;-;-;-;-;- 1108 + 1 2.098 125988.8 0.8299999833106995 1205 3164 4368 DOHH2_400M_050219_2,4371 DOHH2_400M_050219_2,4371,LYCDVCPKTCK True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4372 22.043 800.0 223390.0 25 0 11686.0 + 44359 YLREQGKAL 9 173 539.3064083946397 1076.5982638560793 2 539.3065673708916 MULTI CID FTMS 0 0 0 4368 124280.8046875 0.863706017915503 -1 0.0177860260009765 4 Unmodified _YLREQGKAL_ ENSG00000036257|ENST00000264414|CUL3;ENST00000484081.1_1_2:225370642-225376119:-|nuORF;nc|ENSG00000036257|Q13618-2|CUL3;nc|ENSG00000036257|Q13618-3|CUL3 89.40071534611396 0.0152361884002446 2 [Y{I|L}]REQGKA{I|L} 9 0 + 87.486 0.0 0.0 8.1262 8.1262 84.212 0.0 0.0 0.0 26.321457414888062 16.478174818886373 16.478174818886373 2.498774732165998 0 1.7544321917401078 2.0 0.4247425010840047 0.9531198197908842 + + [Y{I|L}]REQGKA{I|L};[Y{I|L}]REGAGKA{I|L};[Y{I|L}]REGQKA{I|L};[Y{I|L}]AA[RD]GKA{I|L};[Y{I|L}]Y[H{I|L}]GKA{I|L};{[QN]|[E{I|L}]|[KN]}[YR]QGKA{I|L};{[QN]|[E{I|L}]|[KN]}[YR]GAGKA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VVYAGKA{I|L};{[ET]|[MV]}[KP]YAGKA{I|L};[HD]P[{I|L}V]QGKA{I|L} 8.1262;7.8941;6.7626;6.5202;6.4281;5.6813;5.4492;5.2075;5.0073;4.8748 +;-;-;-;-;-;-;-;-;- + 1950 1 2.098 135787.2 0.6100000143051147 1206 3164 4368 DOHH2_400M_050219_2,4372 DOHH2_400M_050219_2,4372,YLREQGKAL True True YLREQGKAL 22.043074 539.306567370892 897426.1875 4368.0 ENST00000484081.1_1_2:225370642-225376119:-|nuORF;;nc|ENSG00000036257|Q13618-2|CUL3;;nc|ENSG00000036257|Q13618-3|CUL3;;ENSG00000036257|ENST00000264414|CUL3 4.297747850418091 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4373 22.057 800.0 150890.0 25 0 7107.5 + -1 MMHIAEPDSAF 11 136 640.7661299094318 1279.5177068856635 2 640.7657958865166 MULTI CID FTMS 0 0 0 4368 98602.515625 1.0 0 0.0 5 2 Oxidation (M) _M(Oxidation (M))M(Oxidation (M))HIAEPDSAF_ REV__ENSG00000132622|ENST00000254963|HSPA12B 13.042465956692816 0.7638483625850725 2 [QA]HD[{M(Oxidation (M))|F}T]E{[QS]|[NT]}A{M(Oxidation (M))|F} 11 -1 + 65.264 0.0 0.0 5.1007 5.1007 78.866 0.0 0.0 0.0 6.180771553266915 6.180771553266915 6.180771553266915 5.044321917401078 0 1.8979400086720373 0.721246399047171 0.3054621874040891 0.8807196863200843 [QA]HD[{M(Oxidation (M))|F}T]E{[QS]|[NT]}A{M(Oxidation (M))|F};[QA]HD[{M(Oxidation (M))|F}T]ED[NG]{M(Oxidation (M))|F};[QA]HDE[{M(Oxidation (M))|F}E]KNY;[QA]HDE[{M(Oxidation (M))|F}E]NKY;[QA]HDE[{M(Oxidation (M))|F}T]{[QS]|[NT]}A{M(Oxidation (M))|F};[QA]HDE[{M(Oxidation (M))|F}T]D[NG]{M(Oxidation (M))|F};[QA]HDE[{M(Oxidation (M))|F}E]KGGY;[QA]HDE[{M(Oxidation (M))|F}E]GGKY;[QA]HDE[VS]C(Carbamidomethyl (C))H[TP];[TP]DS[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]HAQA{M(Oxidation (M))|F} 5.1007;4.7065;4.6176;4.6176;4.5713;4.1771;3.9014;3.9014;3.8197;3.6461 -;-;-;-;-;-;-;-;-;- 2363 1 2.098 91469.7 0.6100000143051147 1207 3164 4368 DOHH2_400M_050219_2,4373 DOHH2_400M_050219_2,4373,MMHIAEPDSAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4374 22.058 35.0 3660000.0 25 0 1445900.0 -1 0 65 388.21498969624207 387.2077132296421 1 388.2148010134697 MULTI CID FTMS 0 0 0 4368 1319323.125 0.8136159570893404 -2 0.0410652160644531 6 2 Y 1 -1 15.485 0.0 0.0 3.999 0.0 0.0 206.1332331044452 0.0 206.1332331044452 0.0 2.8996696177314174 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.999 - 6 + 1 2.098 109479.9 1.0 1208 3164 4368 DOHH2_400M_050219_2,4374 DOHH2_400M_050219_2,4374, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4376 22.071 554.0 160280.0 25 0 12303.0 + 45421 YTDGPGGSGQY 11 126 551.2277449694994 1100.4409370057988 2 551.2263671755791 MULTI CID FTMS 0 0 0 4375 97986.6328125 0.3486562781980595 4 -0.2100505828857422 1 Unmodified _YTDGPGGSGQY_ ENSG00000090975|ENST00000320201|PITPNM2;ENSG00000110697|ENST00000356404|PITPNM1;ENST00000451868.2_1_12:123484929-123519149:-|nuORF;nc|ENSG00000090975|Q9BZ72-2|PITPNM2;nc|ENSG00000110697|O00562-2|PITPNM1 18.1463463914782 0.6576820063886638 2 [YE]GS 4 8 32.664 0.0 0.0 2.9682 0.0 0.0 0.0 661.2590576935519 661.2590576935519 17.179250024847263 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.0 0.0 [YE]GS 2.9682 - 483 1 2.092 71436.0 1.0 1209 3165 4375 DOHH2_400M_050219_2,4376 DOHH2_400M_050219_2,4376,YTDGPGGSGQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4377 22.085 800.0 229300.0 25 0 30397.0 -1 MPENMQVSQFK 11 130 685.8091917578913 1369.6038305825823 2 685.8096191287041 MULTI CID FTMS 0 0 0 4375 191157.96875 0.8012331046056278 -1 0.0494880676269531 2 2 Oxidation (M) _M(Oxidation (M))PENM(Oxidation (M))QVSQFK_ ENSG00000116833|ENST00000367362|NR5A2;nc|ENSG00000116833|O00482-3|NR5A2 10.799506525563784 0.8105043987015127 2 {[CP]|[EA]}VD{I|L}[EP]PQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E 12 -1 + 28.524 0.0 0.0 2.0826 2.0826 72.181 0.0 0.0 0.0 0.629778129126283 6.457162068135972 0.629778129126283 6.61181443446619 0 1.0387254899964358 0.0 0.0 0.2887254899964357 {[CP]|[EA]}VD{I|L}[EP]PQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E;{[CP]|[EA]}VD{I|L}[WH]Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E;{[CP]|[EA]}VD{I|L}[EP]PWWE;[C(Carbamidomethyl (C))C]KQP[EP]{I|L}C(Carbamidomethyl (C))[HV];{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QP[EP]{I|L}C(Carbamidomethyl (C))[HV];[PG]AK[Y{M(Oxidation (M))|F}]PPD[YT]D;{[CP]|[EA]}VD{I|L}S{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{[MS]|[{M(Oxidation (M))|F}A]}E;[PG]AK[Y{M(Oxidation (M))|F}]PPD{[{M(Oxidation (M))|F}C]|[YS]}E;[C(Carbamidomethyl (C))C]KQP[EP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{M(Oxidation (M))|F};{[CP]|[EA]}VD{I|L}S[C(Carbamidomethyl (C))M]V{[MS]|[{M(Oxidation (M))|F}A]}E 2.0826;1.5999;1.3891;1.3633;1.2721;1.2474;1.2124;1.1562;1.0583;1.0504 -;-;-;-;-;-;-;-;-;- 2613 1 2.092 131130.6 0.800000011920929 1210 3165 4375 DOHH2_400M_050219_2,4377 DOHH2_400M_050219_2,4377,MPENMQVSQFK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4378 22.09 235.0 762590.0 25 0 92973.0 28328 PSAACDEY 8 128 428.1615341115641 854.3085152899282 2 428.1605407595634 MULTI CID FTMS 0 0 0 4375 167754.953125 0.1013531319798583 -2 0.0672740936279296 3 Unmodified _PSAACDEY_ ENSG00000113504|ENST00000264930|SLC12A7 13.50788311687929 0.7113601687236069 2 {[WN]|[YH]}EDEY 6 5 + 40.957 0.0 0.0 4.7942 4.7942 76.286 0.0 0.0 0.0 3.952424927286849 16.197887582883936 3.952424927286849 3.952424927286849 0 0.4247425010840047 1.0969100130080565 0.2887254899964357 0.0 {[WN]|[YH]}EDEY;{[YC]|[HE]}DYEY;[YE]HDEY;{[YC]|[HE]}YDEY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HYEY;{[ES]|[DT]|[{I|L}C]}[NP][MD]Y;[HM]{[SA]|[TG]}[C(Carbamidomethyl (C))S]Y 4.7942;4.3315;3.8626;3.8482;3.4793;0.83196;0.16898 -;-;-;-;-;-;- 91 1 2.092 142598.3 1.0 1211 3165 4375 DOHH2_400M_050219_2,4378 DOHH2_400M_050219_2,4378,PSAACDEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4379 22.103 800.0 124250.0 25 0 7247.3 27242 PGRLIDHVKKK 11 108 645.9012270714092 0 645.7252075076103 PEAK CID FTMS 0 0 0 4375 20130.08984375 0.7265461725512671 1 -0.0828819274902343 4 Unmodified _PGRLIDHVKKK_ ENSG00000198231|ENST00000389924|DDX42;nc|ENSG00000198231|Q86XP3-2|DDX42 1.4819007175156935 0.4761840153648598 2 Y 1 11 6.9897 0.0 0.0 0.54193 0.0 0.0 303.4547990440696 820.2411338416724 1123.695932885742 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.54193 - 18 + 1 2.092 72748.0 0.7300000190734863 1212 3165 4375 DOHH2_400M_050219_2,4379 DOHH2_400M_050219_2,4379,PGRLIDHVKKK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4380 22.113 566.0 286490.0 25 0 16600.0 -1 0 166 352.13595325491656 351.12867678831657 1 351.8847228884697 MULTI CID FTMS 0 0 0 4375 31215.359375 0.8003689789279379 10 -0.4084720611572265 5 2 {M(Oxidation (M))|F} 1 -1 16.99 0.0 0.0 4.8386 0.0 0.0 186.0492375566744 0.0 186.0492375566744 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 4.8386 - 28 + 1 2.092 131466.6 1.0 1213 3165 4375 DOHH2_400M_050219_2,4380 DOHH2_400M_050219_2,4380, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4381 22.127 800.0 165080.0 25 0 14919.0 + 34852 SQGFSHSQM 9 164 512.7111434376546 1023.4077339421092 2 512.7117187380791 MULTI CID FTMS 0 0 0 4375 93715.1640625 0.7188766086423469 -1 0.0494880676269531 6 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 51.41523569358685 0.0372669606867193 2 {[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F} 9 2 + 50.16 0.0 0.0 4.9013 4.9013 79.065 0.0 0.0 0.0 6.083493856482249 6.083493856482249 6.083493856482249 6.083493856482249 0 1.742992819099939 0.6575773191777937 0.3807196863200844 0.3807196863200844 {[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}GMNSWQS;{[QS]|[NT]}G{M(Oxidation (M))|F}SN[HT]{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}QS;{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};[AG]SG{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};[AG]SGMNSWQS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}GMGGSWQS 4.9013;4.3068;4.1777;3.8076;3.5999;3.596;3.5722;3.4431;3.4071;3.2779 -;-;-;-;-;-;-;-;-;- 876 + 1 2.092 103558.3 0.9900000095367432 1214 3165 4375 DOHH2_400M_050219_2,4381 DOHH2_400M_050219_2,4381,SQGFSHSQM True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4382 22.136 487.0 337840.0 25 0 115130.0 + 30469 REAERLVKY 9 87 582.3304583764077 1162.646363819615 2 582.3307372927666 MULTI CID FTMS 0 0 0 4375 214550.609375 1.0 0 0.0 7 Unmodified _REAERLVKY_ ENSG00000147123|ENST00000377811|NDUFB11;nc|ENSG00000147123|Q9NX14-2|NDUFB11 37.07464296494664 0.0915153923251136 2 [VG]{[VA]|[{I|L}G]}V{I|L}[WE]KY 10 6 + 52.4 0.0 0.0 4.5069 4.5069 76.842 0.0 0.0 0.0 5.625918950875501 5.625918950875501 5.625918950875501 5.625918950875501 0 1.1549471895720984 2.0 0.0 0.6747425010840047 [VG]{[VA]|[{I|L}G]}V{I|L}[WE]KY;{[RE]|[WV]}{[CP]|[EA]}R[{I|L}V]KY;[VG][R{I|L}]{I|L}[WE]KY;[TP]KV{I|L}[WE]KY;{[RE]|[WV]}[HK][R{M(Oxidation (M))|F}]KY;[TP]K[YK][HV]KY 4.5069;4.023;3.6445;3.4503;1.807;1.2989 -;+;-;-;-;- + 102 + 1 2.092 131951.6 1.0 1215 3165 4375 DOHH2_400M_050219_2,4382 DOHH2_400M_050219_2,4382,REAERLVKY True True REAERLVKY 22.135782 582.330737292767 8705023.875 4375.0 nc|ENSG00000147123|Q9NX14-2|NDUFB11;;ENSG00000147123|ENST00000377811|NDUFB11 6.305999279022217 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4383 22.141 195.0 451260.0 25 0 50156.0 -1 KTGVCITALK 10 77 545.8180438245604 1089.6215347159207 2 545.8177368044853 MULTI CID FTMS 0 0 0 4375 139944.28125 0.3086845478128368 -3 0.0905532836914062 8 Carbamidomethyl (C) _KTGVC(Carbamidomethyl (C))ITALK_ ENSG00000073331|ENST00000650871|ALPK1;ENST00000504745.1_1_4:113347516-113362363:+|nuORF;nc|ENSG00000073331|Q96QP1-2|ALPK1 5.296884461304476 0.7021353017287152 2 KTT[{I|L}P][WP]K 8 -1 26.973 0.0 0.0 2.4754 0.0 0.0 120.0597260884477 0.0 120.0597260884477 0.0 17.508943624335558 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.1861818737241735 KTT[{I|L}P][WP]K 2.4754 - 86 + 1 2.092 71175.0 1.0 1216 3165 4375 DOHH2_400M_050219_2,4383 DOHH2_400M_050219_2,4383,KTGVCITALK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4385 22.157 800.0 28417.0 25 0 2356.7 -1 0 31 879.0934936404228 0 879.0934936404228 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.092 26771.6 0.5 1217 3166 4384 DOHH2_400M_050219_2,4385 DOHH2_400M_050219_2,4385, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4386 22.158 41.0 1942000.0 25 0 465980.0 -1 IICIGPNVL 9 63 499.7907319059802 997.5669108787604 2 499.7907897830009 MULTI CID FTMS 0 0 0 4384 1599515.0 1.0 0 0.0 2 Carbamidomethyl (C) _IIC(Carbamidomethyl (C))IGPNVL_ ENSG00000185811|ENST00000331340|IKZF1;ENST00000462201.1_1_7:50348444-50444544:+|nuORF;nc|ENSG00000185811|Q13422-3|IKZF1;nc|ENSG00000185811|Q13422-4|IKZF1;nc|ENSG00000185811|Q13422-5|IKZF1;nc|ENSG00000185811|Q13422-7|IKZF1;nc|ENSG00000185811|Q13422-8|IKZF1 16.942295170755138 0.3780752226737986 2 S{I|L} 2 -1 20.005 0.0 0.0 2.0054 0.0 0.0 779.4399252603995 0.0 779.4399252603995 0.0 9.54750954047803 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 S{I|L} 2.0054 - 9 + 1 2.092 65961.1 1.0 1218 3166 4384 DOHH2_400M_050219_2,4386 DOHH2_400M_050219_2,4386,IICIGPNVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4387 22.162 221.0 574290.0 25 0 122120.0 + 7210 EEQSHPARLY 10 93 410.5349928551485 1228.5831491656456 3 410.5348083376884 MULTI CID FTMS 0 0 0 4384 147666.375 0.3963011410425855 -2 0.1323699951171875 3 Unmodified _EEQSHPARLY_ ENSG00000114388|ENST00000232501|NPRL2;ENST00000461020.5_1_3:50385039-50386041:-|nuORF;ENST00000467294.1_1_3:50385039-50385481:-|nuORF;ENST00000487632.5_1_3:50385039-50386411:-|nuORF 8.745405648335112 0.6861838735306406 2 SHP 3 7 12.307 0.0 0.0 1.0017 0.0 0.0 386.1435706424752 518.2726534479124 904.4162240903876 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + SHP 1.0017 + + 47 + 1 2.092 106050.9 1.0 1219 3166 4384 DOHH2_400M_050219_2,4387 DOHH2_400M_050219_2,4387,EEQSHPARLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4388 22.166 186.0 271490.0 25 0 32346.0 + 35629 SVYPKKEL 8 72 482.2791152831777 962.5436776331552 2 482.2792846560478 MULTI CID FTMS 0 0 0 4384 105108.046875 0.7961656452609378 -1 0.0828819274902343 4 Unmodified _SVALVAAAVY_ nc|ENSG00000007341|Q8TDW4-2|ST7L;nc|ENSG00000007341|Q8TDW4-4|ST7L;nc|ENSG00000004866|Q9NRC1-6|ST7;nc|ENSG00000007341|Q8TDW4-6|ST7L;nc|ENSG00000007341|Q8TDW4-3|ST7L;nc|ENSG00000004866|Q9NRC1|ST7;nc|ENSG00000007341|Q8TDW4-5|ST7L;nc|ENSG00000004866|Q9NRC1-3|ST7;ENSG00000004866|ENST00000323984|ST7;nc|ENSG00000004866|Q9NRC1-2|ST7;ENST00000464020.1_1_7:116859112-116863031:+|nuORF;ENSG00000007341|ENST00000358039|ST7L;nc|ENSG00000004866|Q9NRC1-5|ST7;nc|ENSG00000004866|Q9NRC1-4|ST7;nc|ENSG00000007341|Q8TDW4-7|ST7L 10.823927491677226 0.6659270209832991 2 [VS]YP 4 8 36.555 0.0 0.0 3.7977 0.0 0.0 0.0 513.3071993463499 513.3071993463499 23.79034649851686 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [VS]YP 3.7977 - 27 + 1 2.092 45428.3 1.0 1220 3166 4384 DOHH2_400M_050219_2,4388 DOHH2_400M_050219_2,4388,SVALVAAAVY False False SVYPKKEL 22.165948 482.279284656048 697552.9375 4384.0 nc|ENSG00000007341|Q8TDW4-2|ST7L;;nc|ENSG00000007341|Q8TDW4-4|ST7L;;nc|ENSG00000004866|Q9NRC1-6|ST7;;nc|ENSG00000007341|Q8TDW4-6|ST7L;;nc|ENSG00000007341|Q8TDW4-3|ST7L;;nc|ENSG00000004866|Q9NRC1|ST7;;nc|ENSG00000007341|Q8TDW4-5|ST7L;;nc|ENSG00000004866|Q9NRC1-3|ST7;;ENSG00000004866|ENST00000323984|ST7;;nc|ENSG00000004866|Q9NRC1-2|ST7;;ENST00000464020.1_1_7:116859112-116863031:+|nuORF;;ENSG00000007341|ENST00000358039|ST7L;;nc|ENSG00000004866|Q9NRC1-5|ST7;;nc|ENSG00000004866|Q9NRC1-4|ST7;;nc|ENSG00000007341|Q8TDW4-7|ST7L 2.662591457366944 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4389 22.168 111.0 818520.0 25 0 264170.0 -1 0 95 490.2840509070462 489.2767744404462 1 490.2838622927666 MULTI CID FTMS 0 0 0 4384 583707.3125 0.6945400105869322 11 -0.4574298858642578 5 2 Y 1 -1 15.485 0.0 0.0 3.1648 0.0 0.0 308.2024316443509 0.0 308.2024316443509 0.0 6.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.1648 - 31 + 1 2.092 74987.8 1.0 1221 3166 4384 DOHH2_400M_050219_2,4389 DOHH2_400M_050219_2,4389, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4390 22.182 800.0 222310.0 25 0 69445.0 -1 0 64 1124.4392808739008 3370.2960132219023 3 1124.772509753704 MULTI CID FTMS 0 0 0 4384 332081.625 0.6562627893934625 -1 0.0828819274902343 6 2 WYW 3 -1 9.0411 0.0 0.0 0.26826 0.0 0.0 1710.5951241593475 1121.4424532526002 2832.037577411948 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WYW 0.26826 - 50 + 1 2.092 159812.0 0.8799999952316284 1222 3166 4384 DOHH2_400M_050219_2,4390 DOHH2_400M_050219_2,4390, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4391 22.196 800.0 141380.0 25 0 63066.0 + -1 NVMRIKQFK 9 92 590.33611060841 0 590.3361083865166 PEAK CID FTMS 0 0 0 4384 100771.1015625 0.6230446262737233 192 -8.92422103881836 7 Oxidation (M) _NVM(Oxidation (M))RIKQFK_ REV__ENST00000265882.5_1_2:80390209-80390257:-|nuORF 7.289230182591677 0.3433663536648894 2 G 1 -1 5.4846 0.0 0.0 0.46532 0.0 0.0 993.5408297599856 125.07254968814688 1118.6133794481325 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.46532 - 11 + 1 2.092 90120.7 0.5799999833106995 1223 3166 4384 DOHH2_400M_050219_2,4391 DOHH2_400M_050219_2,4391,NVMRIKQFK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4393 22.2 15.0 2377400.0 25 0 115750.0 + -1 CLCFAPCIAF 10 77 629.7757253405404 1257.5368977478806 2 629.7761718630791 MULTI CID FTMS 0 0 0 4392 3465847.25 0.3759844125570443 3 -0.0792179107666015 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 18.13498045792455 0.5432546531930572 2 [AG]AHDEAQQNA{M(Oxidation (M))|F} 12 -1 + 74.357 0.0 0.0 5.9129 5.9129 76.72 0.0 0.0 0.0 7.126746541327236 16.61181443446619 7.126746541327236 0.796896906561031 0 0.4247425010840047 1.5228787452803376 0.3252574989159953 0.3807196863200844 [AG]AHDEAQQNA{M(Oxidation (M))|F};[AG]AHDEAQNQA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEAQNQA{M(Oxidation (M))|F};[AG]AHDEAQ[AG]NA{M(Oxidation (M))|F};[AG]AHDEA[AG]QNA{M(Oxidation (M))|F};[AG]AHDEAQQGGA{M(Oxidation (M))|F};[AG]AHDEAQGGQA{M(Oxidation (M))|F};[AG]AHDEAQN[AG]A{M(Oxidation (M))|F};[AG]AHDEA[AG]NQA{M(Oxidation (M))|F} 5.9129;5.8496;5.3462;5.2828;5.1894;5.1894;5.1894;5.1261;5.1261;5.1261 -;-;-;-;-;-;-;-;-;- 1209 1 2.092 32064.6 1.0 1224 3167 4392 DOHH2_400M_050219_2,4393 DOHH2_400M_050219_2,4393,CLCFAPCIAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4394 22.202 77.0 643210.0 25 0 97749.0 + 6557 EALPKQSV 8 75 436.2479791575193 870.4814053818386 2 436.2479125857353 MULTI CID FTMS 0 0 0 4392 646894.6875 0.3425582850975199 2 -0.0721263885498046 2 Unmodified _EALPKQSV_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 48.345845343767074 0.1470278396477103 2 {[CP]|[EA]}{I|L}PKQSV 8 0 {[CP]|[EA]}{I|L} + + 26.587 9.1812 2.9318 3.0542 3.0542 48.958 0.0 0.0 0.0 0.0 10.60016905927597 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.3054621874040891 + + {[CP]|[EA]}{I|L}PKQSV 3.0542 + + 89 + 1 2.092 43504.2 1.0 1225 3167 4392 DOHH2_400M_050219_2,4394 DOHH2_400M_050219_2,4394,EALPKQSV False True EALPKQSV 22.202204 436.247912585735 9857966.0 4392.0 nc|ENSG00000145741|P20290-2|BTF3;;ENSG00000145741|ENST00000380591|BTF3 5.340343952178955 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4395 22.204 91.0 922710.0 25 0 109190.0 + + -1 FNHKREIHL 9 85 398.5560789216029 1192.6464073650088 3 398.5560790896416 MULTI CID FTMS 0 0 0 4392 329694.78125 0.6368060325627044 -2 0.1379241943359375 3 Carbamidomethyl (C),Oxidation (M) _PM(Oxidation (M))LKRLC(Carbamidomethyl (C))FL_ ENSG00000165934|ENST00000298875|CPSF2 8.745405648335112 0.6093864874670651 2 {M(Oxidation (M))|F}N[HK][R{I|L}]EH{I|L} 9 -1 + 37.386 0.0 0.0 3.1347 3.1347 82.088 0.0 0.0 0.0 24.198559138057767 12.58741856696816 12.58741856696816 37.38614676430189 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}N[HK][R{I|L}]EH{I|L} 3.1347 - 48 + 1 2.092 72198.6 1.0 1226 3167 4392 DOHH2_400M_050219_2,4395 DOHH2_400M_050219_2,4395,PMLKRLCFL False False FNHKREIHL 22.204194 398.556079089642 2375837.25 4392.0 ENSG00000165934|ENST00000298875|CPSF2 1.0442244211832683 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4396 22.218 800.0 158380.0 25 0 13122.0 -1 ECGKAFTCSSY 11 147 626.7518843709418 1251.4892158086834 2 626.7523071169853 MULTI CID FTMS 0 0 0 4392 265513.6875 0.1022977027547678 6 -0.1845760345458984 4 Carbamidomethyl (C) _EC(Carbamidomethyl (C))GKAFTCSSY_ ENSG00000169981|ENST00000396056|ZNF35 24.99096001346401 0.505407273373304 2 HSSY 4 -1 39.597 0.0 0.0 3.164 0.0 0.0 759.2937029686428 0.0 759.2937029686428 0.0 16.057903966684478 0.0 0.0 0 0.4247425010840047 0.0 0.8807196863200843 0.0 HSSY 3.164 - 2409 + 1 2.092 98129.2 0.9300000071525574 1227 3167 4392 DOHH2_400M_050219_2,4396 DOHH2_400M_050219_2,4396,ECGKAFTCSSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4397 22.224 305.0 339330.0 25 0 53188.0 22753 LQLRETVK 8 88 493.8031186745546 985.5916844159092 2 493.8035461306572 MULTI CID FTMS 0 0 0 4392 257826.8125 0.8168534137428898 -3 0.1874122619628906 5 Unmodified _LQLRETVK_ nc|ENSG00000138311|Q70YC4|ZNF365 27.628801355627647 0.4629596117395134 2 QTVK 4 4 46.983 0.0 0.0 4.7669 0.0 0.0 511.3049402223059 0.0 511.3049402223059 0.0 25.55584714187489 0.0 0.0 0 1.424742501084005 0.0 0.0 0.3807196863200844 QTVK 4.7669 - 158 + 1 2.092 84485.5 1.0 1228 3167 4392 DOHH2_400M_050219_2,4397 DOHH2_400M_050219_2,4397,LQLRETVK False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 4398 22.229 300.0 284130.0 25 0 27291.0 + 802 AESPAGHSF 9 105 451.70378265263696 901.393012372074 2 451.7041503787041 MULTI CID FTMS 0 0 0 4392 132013.59375 0.053257003633811 -8 0.2829570770263672 6 Unmodified _AESPAGHSF_ ENSG00000136699|ENST00000680298|SMPD4;ENST00000438378.2_1_2:132275414-132277996:+|nuORF;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;nc|ENSG00000136699|Q9NXE4-10|SMPD4;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4-5|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;nc|ENSG00000136699|Q9NXE4-7|SMPD4;nc|ENSG00000136699|Q9NXE4-8|SMPD4;nc|ENSG00000136699|Q9NXE4-9|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4 61.357469665136826 0.0253304979873734 2 {[CP]|[EA]}SPAGHS{M(Oxidation (M))|F} 9 0 + 51.864 0.0 0.0 5.7537 5.7537 75.439 0.0 0.0 0.0 7.147642715192504 9.802046884880935 7.147642715192504 0.4575749056067479 0 1.0 0.0 0.9802046884880936 0.0 + + {[CP]|[EA]}SPAGHS{M(Oxidation (M))|F};{[CP]|[EA]}SPQHS{M(Oxidation (M))|F};{[CP]|[EA]}SPAGHAY;{[CP]|[EA]}SPQHAY;{[CP]|[EA]}SPA[HQ]Y 5.7537;5.703;4.6663;4.6155;3.0647 +;-;-;-;- + 311 + 1 2.092 70534.3 1.0 1229 3167 4392 DOHH2_400M_050219_2,4398 DOHH2_400M_050219_2,4398,AESPAGHSF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4399 22.237 432.0 196410.0 25 0 48854.0 + 35568 STQMTITTQK 10 110 569.7914425611614 1137.5683321891229 2 569.7922241091728 MULTI CID FTMS 0 0 0 4392 229869.53125 0.2355284104419054 3 -0.0792179107666015 7 Unmodified _STQMTITTQK_ ENSG00000181143|ENST00000397910|MUC16 61.08992128646608 0.0337271188422265 2 {[MG]|[TS]}QMT{I|L}TTQK 10 0 + 54.475 0.0 0.0 4.7887 4.7887 81.502 0.0 0.0 0.0 35.01438033905627 10.867365081617578 10.867365081617578 9.164539485499247 0 0.7302046884880937 0.0 0.8252574989159953 0.6694451763165201 + + {[MG]|[TS]}QMT{I|L}TTQK;{[MG]|[TS]}[AG]MT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}TT[AG]K;{[MG]|[TS]}QMT{I|L}T[KS]AA;{[MG]|[TS]}[AG]MT{I|L}TT[AG]K;{[MG]|[TS]}QMT{I|L}[YV]VP;{[MG]|[TS]}[AG]MT{I|L}T[KS]AA;{[MG]|[TS]}[AG]MT{I|L}[YV]VP 4.7887;3.9831;3.9831;3.3248;3.1806;3.027;2.5223;1.8866 +;-;-;-;-;-;-;- + 360 + 1 2.092 66662.7 1.0 1230 3167 4392 DOHH2_400M_050219_2,4399 DOHH2_400M_050219_2,4399,STQMTITTQK True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4400 22.24 142.0 526040.0 25 0 121460.0 + 33915 SLGELTRPY 9 88 518.2784525188707 0 518.2781249880791 PEAK CID FTMS 0 0 0 4392 197633.71875 0.919047531509304 -24 0.7402877807617188 8 Unmodified _SLGELTRPY_ REV__ENSG00000078043|ENST00000585916|PIAS2;REV__ENST00000590127.5_1_18:44407908-44497416:-|nuORF;REV__ENST00000592011.5_1_18:44416318-44500057:-|nuORF;REV__nc|ENSG00000078043|O75928-2|PIAS2;REV__nc|ENSG00000078043|O75928-3|PIAS2 18.13498045792455 0.2189554373504223 2 E 1 -1 7.6192 0.0 0.0 0.73648 0.0 0.0 834.4256661687976 68.05137048892811 902.4770366577258 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 E 0.73648 + + 25 + 1 2.092 63572.4 1.0 1231 3167 4392 DOHH2_400M_050219_2,4400 DOHH2_400M_050219_2,4400,SLGELTRPY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4402 22.257 800.0 90487.0 25 0 8011.2 -1 0 106 636.7825287180669 2543.101009005868 4 636.7831909060478 MULTI CID FTMS 0 0 0 4401 71781.625 0.5604479754136149 1 -0.0284252166748046 1 2 ANQQAE[CS]EK 10 -1 37.09 0.0 0.0 1.4584 0.0 0.0 1436.6257437250888 0.0 1436.6257437250888 0.0 18.700338118551933 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.6747425010840047 ANQQAE[CS]EK 1.4584 - 1312 + 1 2.084 60477.9 0.6399999856948853 1232 3168 4401 DOHH2_400M_050219_2,4402 DOHH2_400M_050219_2,4402, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4403 22.262 249.0 361560.0 25 0 72080.0 + 30598 REWKEQGSKTF 11 96 465.9058664673249 1394.6957700021749 3 465.9053832888603 MULTI CID FTMS 0 0 0 4401 193613.21875 0.8479220335053596 -2 0.0987434387207031 2 Unmodified _REWKEQGSKTF_ ENSG00000116133|ENST00000371269|DHCR24;nc|ENSG00000116133|Q15392-2|DHCR24 27.289341220302404 0.4514405737498551 2 T{M(Oxidation (M))|F} 2 9 32.078 0.0 0.0 2.3 0.0 0.0 1128.567513647775 0.0 1128.567513647775 0.0 11.161968799114844 0.0 0.0 0 0.7614393726401688 0.0 0.3494850021680094 0.0 + T{M(Oxidation (M))|F} 2.3 + + 109 1 2.084 73756.9 1.0 1233 3168 4401 DOHH2_400M_050219_2,4403 DOHH2_400M_050219_2,4403,REWKEQGSKTF False True REWKEQGSKTF 22.261704 465.90538328886 1011427.25 4401.0 ENSG00000116133|ENST00000371269|DHCR24;;nc|ENSG00000116133|Q15392-2|DHCR24 5.90628449122111 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4404 22.268 352.0 187490.0 25 0 16173.0 + -1 ALLKKHEAL 9 102 511.74470298473983 1021.4748530362796 2 511.7438232302666 MULTI CID FTMS 0 0 0 4401 84629.7734375 0.6827407368331024 -3 0.1816253662109375 3 Oxidation (M) _AIGFHSM(Oxidation (M))IM_ nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1 19.438996006549623 0.310492472477042 2 {I|L}M 2 -1 20.727 0.0 0.0 2.0291 0.0 0.0 759.3409246688954 0.0 759.3409246688954 0.0 7.170306400511706 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {I|L}M 2.0291 + + 116 + 1 2.084 54758.9 1.0 1234 3168 4401 DOHH2_400M_050219_2,4404 DOHH2_400M_050219_2,4404,AIGFHSMIM False False ALLKKHEAL 22.268062 511.743823230267 265938.34375 4401.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 3.0417816638946533 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4406 22.273 70.0 688880.0 25 0 74843.0 + 30515 REIESSPQY 9 75 554.7676000574122 1107.5206471816243 2 554.7671386599541 MULTI CID FTMS 0 0 0 4405 785993.1875 0.2976144677856525 3 -0.0546684265136718 1 Unmodified _REIESSPQY_ ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ENST00000564284.1_1_16:28841101-28842119:+|nuORF;ENST00000570284.1_1_16:28840745-28842349:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 31.26834338654808 0.1333407332142048 2 ESS[QP]Y 6 3 37.497 0.0 0.0 3.3856 0.0 0.0 398.22801406074376 0.0 398.22801406074376 0.0 30.77282457865905 0.0 0.0 0 0.8494850021680094 0.0 0.7742275032520141 0.0 + ESS[QP]Y 3.3856 + + 73 1 2.084 43345.6 1.0 1235 3169 4405 DOHH2_400M_050219_2,4406 DOHH2_400M_050219_2,4406,REIESSPQY False True REIESSPQY 22.272573 554.767138659954 30225556.0 4405.0 ENST00000564284.1_1_16:28841101-28842119:+|nuORF;;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;;ENST00000570284.1_1_16:28840745-28842349:+|nuORF;;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;;ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;;ENSG00000168488|ENST00000336783|ATXN2L;;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;;nc|ENSG00000168488|Q8WWM7-5|ATXN2L 8.057317097981771 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4407 22.275 126.0 546030.0 25 0 117470.0 + 6620 EARSIAGHY 9 87 502.25107931809913 1002.4876057029984 2 502.2502319216728 MULTI CID FTMS 0 0 0 4405 235548.1875 0.0217851298673792 11 -0.4436988830566406 2 Unmodified _EARSIAGHY_ REV__ENSG00000169291|ENST00000304760|SHE 11.640296217721598 0.521594087909532 2 HY 2 -1 18.443 0.0 0.0 1.8398 0.0 0.0 684.3544402750671 0.0 684.3544402750671 0.0 8.839256468719157 0.0 0.0 0 0.5 0.0 0.0 0.0 HY 1.8398 + + 23 + 1 2.084 57391.3 1.0 1236 3169 4405 DOHH2_400M_050219_2,4407 DOHH2_400M_050219_2,4407,EARSIAGHY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4409 22.282 256.0 200290.0 25 0 41216.0 + 38484 TSDTVQHGAVY 11 62 589.2795844528888 1176.5446159725775 2 589.2797119021416 MULTI CID FTMS 0 0 0 4408 134169.3125 0.9887946366625616 1 -0.0209064483642578 1 Unmodified _TSDTVQHGAVY_ ENSG00000143751|ENST00000272091|SDE2 16.149105407346934 0.6992268271266642 2 VY 2 9 22.959 0.0 0.0 1.9514 0.0 0.0 896.40211216574 0.0 896.40211216574 0.0 10.48455006504028 0.0 0.0 0 0.5 0.0 0.0 0.0 + VY 1.9514 + + 66 + 1 2.084 45058.9 1.0 1237 3170 4408 DOHH2_400M_050219_2,4409 DOHH2_400M_050219_2,4409,TSDTVQHGAVY False True TSDTVQHGAVY 22.282181 589.279711902142 690375.6875 4408.0 ENSG00000143751|ENST00000272091|SDE2 5.80620543162028 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4410 22.296 800.0 105630.0 25 0 11108.0 + -1 RNMGVPNVLYE 11 52 654.3218159444524 0 654.4077636599541 PEAK CID FTMS 0 0 0 4408 48345.34765625 0.9540238302282203 -1 0.0070915222167968 2 Oxidation (M) _RNM(Oxidation (M))GVPNVLYE_ REV__ENSG00000146285|ENST00000369020|SCML4;REV__ENST00000476798.1_1_6:108041877-108053271:-|nuORF;REV__nc|ENSG00000146285|Q8N228-2|SCML4;REV__nc|ENSG00000146285|Q8N228-3|SCML4 2.282774691075616 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.084 65226.7 0.550000011920929 1238 3170 4408 DOHH2_400M_050219_2,4410 DOHH2_400M_050219_2,4410,RNMGVPNVLYE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4412 22.309 526.0 197510.0 25 0 16132.0 + 11259 GESSSRLGY 9 121 478.2279615086837 954.4413700841674 2 478.2285949587822 MULTI CID FTMS 0 0 0 4411 125375.6015625 0.5435667985789834 -2 0.0279979705810546 1 Unmodified _GESSSRLGY_ ENSG00000106948|ENST00000374088|AKNA;nc|ENSG00000106948|Q7Z591-2|AKNA;nc|ENSG00000106948|Q7Z591-3|AKNA;nc|ENSG00000106948|Q7Z591-6|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA 22.736283301280096 0.2418982879461534 2 {[DA]|[EG]}SS 4 5 44.253 0.0 0.0 4.6365 0.0 0.0 0.0 591.2898553647045 591.2898553647045 25.836134377877325 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + {[DA]|[EG]}SS 4.6365 + + 114 + 1 2.081 83998.9 1.0 1239 3171 4411 DOHH2_400M_050219_2,4412 DOHH2_400M_050219_2,4412,GESSSRLGY False True GESSSRLGY 22.308906 478.228594958782 1292574.875 4411.0 nc|ENSG00000106948|Q7Z591-6|AKNA;;nc|ENSG00000106948|Q7Z591-7|AKNA;;nc|ENSG00000106948|Q7Z591-2|AKNA;;ENSG00000106948|ENST00000374088|AKNA;;nc|ENSG00000106948|Q7Z591-3|AKNA 1.1439555883407593 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4413 22.312 162.0 492550.0 25 0 27856.0 + 7227 EERGFDKAY 9 98 557.7617759312755 1113.5089989293508 2 557.7614623904228 MULTI CID FTMS 0 0 0 4411 347278.6875 0.897427329088618 -1 0.0209064483642578 2 Unmodified _EERGFDKAY_ ENSG00000175334|ENST00000312175|BANF1 38.17557092003332 0.0854718145212029 2 DKAY 4 5 49.412 0.0 0.0 4.4375 0.0 0.0 618.27641493965 0.0 618.27641493965 0.0 33.72608801015147 0.0 0.0 0 1.424742501084005 0.0 0.9247425010840048 0.0 + DKAY 4.4375 + + 67 1 2.081 64822.2 1.0 1240 3171 4411 DOHH2_400M_050219_2,4413 DOHH2_400M_050219_2,4413,EERGFDKAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4414 22.323 603.0 188670.0 25 0 38301.0 + 30592 REVIQERGY 9 86 575.3046034422798 1148.5946539513595 2 575.3045532107353 MULTI CID FTMS 0 0 0 4411 102975.484375 0.6541005202389186 -2 0.0279979705810546 3 Unmodified _REVIQERGY_ ENST00000512692.6_1_4:141290499-141294498:-|nuORF 34.93206674587334 0.1032771302489716 2 [HT]REQ 5 8 31.382 0.0 0.0 2.7322 0.0 0.0 0.0 494.2735994928344 494.2735994928344 14.441518947708325 0.0 0.0 0.0 0 1.075257498915995 0.0 0.0 0.3807196863200844 [HT]REQ 2.7322 - 202 + 1 2.081 90985.7 1.0 1241 3171 4411 DOHH2_400M_050219_2,4414 DOHH2_400M_050219_2,4414,REVIQERGY True True REVIQERGY 22.322658 575.304553210735 772648.8125 4411.0 ENST00000512692.6_1_4:141290499-141294498:-|nuORF 2.779845913251241 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4416 22.339 800.0 129370.0 25 0 11014.0 + + 8245 EEQSHPARLY 10 109 615.3028238436586 1228.5910947541172 2 615.2995483279228 MULTI CID FTMS 0 0 0 4415 120367.34375 0.624187356274434 -4 0.0830936431884765 1 Unmodified _EQEAQRQRGQ_ ENST00000461020.5_1_3:50385039-50386041:-|nuORF;ENST00000467294.1_1_3:50385039-50385481:-|nuORF;ENST00000487632.5_1_3:50385039-50386411:-|nuORF;ENSG00000114388|ENST00000232501|NPRL2 26.268140514670165 0.3785003716575977 2 EEQ[{I|L}P][{I|L}T]QSAN 11 -1 + 51.412 0.0 0.0 4.1846 4.1846 69.276 0.0 0.0 0.0 10.481782781950493 12.805720380180183 10.481782781950493 0.4968123769230459 0 1.805462187404089 1.3979400086720375 0.8494850021680094 0.3494850021680094 EEQ[{I|L}P][{I|L}T]QSAN;EE[RV]{I|L}PSQSAN;EEQ[{I|L}P][WR]SAN;EE[RV]{I|L}PS[AG]SAN;{[DA]|[EG]}AE[{I|L}P][{I|L}T]QSAN;{[DA]|[EG]}A[KQ]{I|L}PSQSAN;EE[RV]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}DAN;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[{I|L}P][{I|L}T]QSAN;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KQ]{I|L}PSQSAN;{[DA]|[EG]}AE[{I|L}P][WR]SAN 4.1846;4.1442;3.8944;3.4012;2.553;2.5125;2.4721;2.413;2.3725;2.2598 -;-;-;-;-;-;-;-;-;- 463 1 2.081 80901.9 0.6100000143051147 1242 3172 4415 DOHH2_400M_050219_2,4416 DOHH2_400M_050219_2,4416,EQEAQRQRGQ False False EEQSHPARLY 22.338833 615.299548327923 3351193.25 4415.0 ENST00000461020.5_1_3:50385039-50386041:-|nuORF;;ENST00000467294.1_1_3:50385039-50385481:-|nuORF;;ENST00000487632.5_1_3:50385039-50386411:-|nuORF;;ENSG00000114388|ENST00000232501|NPRL2 5.617419560750325 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4417 22.353 800.0 226010.0 25 0 21286.0 -1 0 81 644.7781181534184 2575.083366747273 4 644.7780639529228 MULTI CID FTMS 0 0 0 4415 125059.5234375 0.3341194274115364 -3 0.0546684265136718 2 2 DP 2 -1 17.959 0.0 0.0 0.69741 0.0 0.0 0.0 2360.0547151532883 2360.0547151532883 0.8753718491936233 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DP 0.69741 - 155 + 1 2.081 134296.9 0.6000000238418579 1243 3172 4415 DOHH2_400M_050219_2,4417 DOHH2_400M_050219_2,4417, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4418 22.367 800.0 143860.0 25 0 67190.0 -1 0 82 579.2882927098156 578.2810162432155 1 579.2869750857353 MULTI CID FTMS 0 0 0 4415 122960.1953125 0.5719148678559447 2 -0.1065235137939453 3 2 {[RE]|[WV]}Q{M(Oxidation (M))|F} 4 -1 + 37.792 0.0 0.0 6.5352 6.5352 90.319 0.0 0.0 0.0 11.056064190928012 27.41307782631541 11.056064190928012 9.719712763997563 0 0.3807196863200844 0.0 0.4247425010840047 0.6549471895720984 {[RE]|[WV]}Q{M(Oxidation (M))|F};{[RE]|[WV]}[AG]{M(Oxidation (M))|F};{[RE]|[WV]}{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[RE]|[WV]} 6.5352;4.8544;2.8109;0.46276 -;-;-;- 23 1 2.081 95626.3 0.5799999833106995 1244 3172 4415 DOHH2_400M_050219_2,4418 DOHH2_400M_050219_2,4418, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4419 22.38 800.0 146040.0 25 0 68298.0 + 20959 LNKLCLIETP 10 79 572.3253288665255 0 572.3252441287041 PEAK CID FTMS 0 0 0 4415 105089.1171875 0.6819527237688847 -64 1.7291126251220703 4 Unmodified _LNKLCLIETP_ REV__ENSG00000173988|ENST00000595396|LRRC63 3.2813086475875832 0.3961065659209837 2 KH 2 -1 7.0783 0.0 0.0 0.61947 0.0 0.0 696.4069310711385 178.05181299381096 874.4587440649494 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KH 0.61947 - 22 + 1 2.081 96475.0 0.550000011920929 1245 3172 4415 DOHH2_400M_050219_2,4419 DOHH2_400M_050219_2,4419,LNKLCLIETP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4421 22.385 105.0 829670.0 25 0 77932.0 28329 PSAACDEY 8 101 428.1615341115641 854.3085152899282 2 428.1614257693291 MULTI CID FTMS 0 0 0 4420 427263.28125 0.2581412407084691 6 -0.293853759765625 1 Unmodified _PSAACDEY_ ENSG00000113504|ENST00000264930|SLC12A7 13.50788311687929 0.7113601687236069 2 {[YC]|[HE]}DYEY 6 5 + 40.992 0.0 0.0 4.7982 4.7982 74.183 0.0 0.0 0.0 2.365739722002772 16.197887582883936 2.365739722002772 2.365739722002772 0 0.4247425010840047 0.0 0.6109243748081782 0.0 {[YC]|[HE]}DYEY;{[WN]|[YH]}EDEY;{[YC]|[HE]}YDEY;[YE]HDEY;{[ES]|[DT]|[{I|L}C]}[NP][MD]Y 4.7982;4.5213;4.0607;3.497;0.67218 -;-;-;-;- 68 1 2.081 71196.9 1.0 1246 3173 4420 DOHH2_400M_050219_2,4421 DOHH2_400M_050219_2,4421,PSAACDEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4422 22.399 800.0 134310.0 25 0 20786.0 + 33127 SETPEIRKY 9 112 561.7931633949207 0 561.7919799685478 PEAK CID FTMS 0 0 0 4420 79445.5390625 0.6890186834041695 5 -0.2367610931396484 2 Unmodified _SETPEIRKY_ ENSG00000141503|ENST00000355280|MINK1;ENST00000574871.1_1_17:4798302-4798913:+|nuORF;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1 47.74868867922204 0.0378261468855112 2 TP{M(Oxidation (M))|F} 3 7 31.682 0.0 0.0 2.8248 0.0 0.0 216.0745661310524 557.2974947565061 773.3720608875585 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 TP{M(Oxidation (M))|F} 2.8248 - 40 + 1 2.081 88456.9 0.5199999809265137 1247 3173 4420 DOHH2_400M_050219_2,4422 DOHH2_400M_050219_2,4422,SETPEIRKY True True SETPEIRKY 22.398855 561.791979968548 633919.625 4420.0 nc|ENSG00000141503|Q8N4C8-5|MINK1;;nc|ENSG00000141503|Q8N4C8-3|MINK1;;nc|ENSG00000141503|Q8N4C8-2|MINK1;;nc|ENSG00000141503|Q8N4C8-4|MINK1;;ENSG00000141503|ENST00000355280|MINK1;;ENST00000574871.1_1_17:4798302-4798913:+|nuORF 6.4890720049540205 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4423 22.401 125.0 538240.0 25 0 37703.0 + 32712 SEAKAFHDY 9 109 534.2433122886938 1066.4720716441875 2 534.2427245974541 MULTI CID FTMS 0 0 0 4420 323607.1875 0.7171932017478703 -2 0.084451675415039 3 Unmodified _SEAKAFHDY_ ENSG00000145687|ENST00000615665|SSBP2;ENSG00000157216|ENST00000610401|SSBP3;ENST00000506960.5_1_5:80911285-80946133:-|nuORF;nc|ENSG00000145687|P81877-2|SSBP2;nc|ENSG00000145687|P81877-3|SSBP2;nc|ENSG00000145687|P81877-4|SSBP2;nc|ENSG00000145687|P81877-5|SSBP2;nc|ENSG00000145687|P81877|SSBP2;nc|ENSG00000157216|Q9BWW4-2|SSBP3;nc|ENSG00000157216|Q9BWW4-3|SSBP3 42.312485326615175 0.0627620958981271 2 {[ES]|[DT]|[{I|L}C]}AKA{M(Oxidation (M))|F}HDY 9 0 + 61.094 0.0 0.0 5.7286 5.7286 80.872 0.0 0.0 0.0 41.762137858390815 12.98332479720628 12.98332479720628 4.771212547196626 0 1.9489700043360187 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}AKA{M(Oxidation (M))|F}HDY;{[ES]|[DT]|[{I|L}C]}AAK{M(Oxidation (M))|F}HDY;{[{M(Oxidation (M))|F}H]|[RQ]}ADKATDY;{[{M(Oxidation (M))|F}H]|[RQ]}DAKATDY;[HD]{M(Oxidation (M))|F}AKATDY;{[{M(Oxidation (M))|F}H]|[RQ]}A[KA]DTDY;[KA]M[R{M(Oxidation (M))|F}]HDY;[KA][DG][YV]HDY;[KA]M{[QG]|[NA]}[PG]TDY;Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AKA{[MS]|[{M(Oxidation (M))|F}A]}Y 5.7286;5.2812;3.1893;2.8162;2.8162;2.443;2.3851;2.309;1.586;1.4132 +;-;-;-;-;-;-;-;-;- + 359 + 1 2.081 55626.1 1.0 1248 3173 4420 DOHH2_400M_050219_2,4423 DOHH2_400M_050219_2,4423,SEAKAFHDY True True SEAKAFHDY 22.401443 534.242724597454 2230066.0 4420.0 nc|ENSG00000145687|P81877-3|SSBP2;;nc|ENSG00000145687|P81877-5|SSBP2;;nc|ENSG00000145687|P81877-4|SSBP2;;nc|ENSG00000145687|P81877-2|SSBP2;;nc|ENSG00000157216|Q9BWW4-3|SSBP3;;ENSG00000145687|ENST00000615665|SSBP2;;nc|ENSG00000145687|P81877|SSBP2;;nc|ENSG00000157216|Q9BWW4-2|SSBP3;;ENSG00000157216|ENST00000610401|SSBP3;;ENST00000506960.5_1_5:80911285-80946133:-|nuORF 8.884136199951172 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4424 22.406 244.0 348350.0 25 0 24904.0 + 7238 EESDLSRQY 9 111 563.7547268548255 1125.494900776451 2 563.7548705935478 MULTI CID FTMS 0 0 0 4420 167504.59375 0.1264474414392192 -3 0.1053581237792968 4 Unmodified _EESDLSRQY_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 81.89019881105858 0.0170587746866453 2 EESD{I|L}SRQY 9 0 + 80.294 0.0 0.0 7.1341 7.1341 92.929 0.0 0.0 0.0 64.59311506991924 3.534087492996392 3.534087492996392 12.703037561203828 0 0.3494850021680094 1.6989700043360187 0.2396518287104437 1.8539171939081167 + + EESD{I|L}SRQY;EESD{I|L}SR[AG]Y;[DP]PRS{I|L}DS[HC];{[TV]|[{I|L}S]}[HQ]S{I|L}DS[HC];EES{[MS]|[{M(Oxidation (M))|F}A]}P[VG]QY;[DP]PRS{I|L}[HS][DC];EES[{M(Oxidation (M))|F}V][QP]QY;[DP]PRP{[MS]|[{M(Oxidation (M))|F}A]}S[HC];EEY{[VA]|[{I|L}G]}[QP]QY;EES[{M(Oxidation (M))|F}V][KP]S{[CT]|[{M(Oxidation (M))|F}G]} 7.1341;6.0055;5.3809;3.4142;3.3956;2.9097;2.6244;2.4606;2.2005;1.1096 +;-;-;-;-;-;-;-;-;- + 481 + 1 2.081 70670.0 1.0 1249 3173 4420 DOHH2_400M_050219_2,4424 DOHH2_400M_050219_2,4424,EESDLSRQY True True EESDLSRQY 22.406009 563.754870593548 19747560.0 4420.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 7.128007253011067 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4425 22.412 349.0 342350.0 25 0 47318.0 9990 FPIPLTRCSV 10 133 378.2116861124 0 378.2098876833916 PEAK CID FTMS 0 0 0 4420 114335.9375 0.7948738754856551 4 -0.2178115844726562 5 Unmodified _FPIPLTRCSV_ ENST00000541264.2_2_14:59108324-59108435:+|nuORF 13.90604991867851 0.345182617568752 2 D 1 10 4.1858 0.0 0.0 0.55485 0.0 0.0 540.2772712953093 96.08248315982657 636.3597544551359 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1421590589602531 0.0 D 0.55485 - 14 + 1 2.081 102162.4 1.0 1250 3173 4420 DOHH2_400M_050219_2,4425 DOHH2_400M_050219_2,4425,FPIPLTRCSV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4426 22.426 800.0 145950.0 25 0 17090.0 + 40657 VLEENQEHY 9 118 580.7644633062447 1159.5143736792893 2 580.7656127810478 MULTI CID FTMS 0 0 0 4420 85669.34375 0.4533356418332598 -2 0.084451675415039 6 Unmodified _VLEENQEHY_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107 69.10491478415734 0.0214449631113747 2 V{I|L}EENQEHY 9 0 + 102.41 0.0 0.0 8.8325 8.8325 84.746 0.0 0.0 0.0 36.47817481888637 2.3044892137827446 2.3044892137827446 2.3044892137827446 0 0.8494850021680094 2.0 1.2302046884880935 0.5242275032520141 + + V{I|L}EENQEHY;V{I|L}EENQENW;V{I|L}EEGGQEHY;V{I|L}EEGGQENW;V{I|L}EEN[AG]ENW;V{I|L}EENQEGGW;V{I|L}EEN[AG]EHY;V{I|L}EEGG[AG]ENW;V{I|L}EEGGQEGGW;V{I|L}EEN[AG]EGGW 8.8325;8.6338;8.0384;7.8396;7.8396;7.8396;7.8228;7.0493;7.0493;6.8336 +;-;-;-;-;-;-;-;-;- + 1348 + 1 2.081 90435.3 0.5400000214576721 1251 3173 4420 DOHH2_400M_050219_2,4426 DOHH2_400M_050219_2,4426,VLEENQEHY True True VLEENQEHY 22.426145 580.765612781048 885457.9375 4420.0 ENSG00000111581|ENST00000229179|NUP107;;nc|ENSG00000111581|P57740-3|NUP107;;nc|ENSG00000111581|P57740-2|NUP107 8.807741006215414 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4427 22.429 152.0 578320.0 25 0 201480.0 -1 0 88 488.2681072582263 487.2608307916263 1 488.2678100466728 MULTI CID FTMS 0 0 0 4420 328060.1875 0.5255804480692517 -24 0.8603363037109375 7 2 QH 2 -1 20.573 0.0 0.0 4.2222 0.0 0.0 204.13236507072628 0.0 204.13236507072628 0.0 14.886831541432311 0.0 0.0 0 0.0 0.0 0.0 0.5 QH 4.2222 - 34 + 1 2.081 71597.4 1.0 1252 3173 4420 DOHH2_400M_050219_2,4427 DOHH2_400M_050219_2,4427, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4429 22.435 175.0 378200.0 25 0 76644.0 7815 ELKEARPR 8 67 499.7907319059802 997.5669108787604 2 499.7908203005791 MULTI CID FTMS 0 0 0 4428 191028.25 0.1194288581226184 8 -0.3756141662597656 1 Unmodified _ELKEARPR_ ENSG00000070366|ENST00000263073|SMG6 10.823927491677226 0.7510103885582552 2 E{I|L} 2 6 20.969 0.0 0.0 2.102 0.0 0.0 0.0 752.4164933738103 752.4164933738103 9.710040265111566 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E{I|L} 2.102 + + 9 + 1 2.081 55956.4 1.0 1253 3174 4428 DOHH2_400M_050219_2,4429 DOHH2_400M_050219_2,4429,ELKEARPR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4430 22.449 800.0 186550.0 25 0 19894.0 19300 LEKSSRRSK 9 117 545.8180438245604 1089.6215347159207 2 545.8180419802666 MULTI CID FTMS 0 0 0 4428 155114.96875 0.3421475572986021 6 -0.2825069427490234 2 Unmodified _LEKSSRRSK_ ENST00000566735.1_1_16:19127638-19127719:+|nuORF 10.823927491677226 0.5436922275383211 2 [{I|L}T]{[QS]|[NT]}[{I|L}P]TTK 9 6 30.096 0.0 0.0 2.7621 0.0 0.0 0.0 117.03773600850435 117.03773600850435 10.969995471343214 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9247425010840048 0.4247425010840047 [{I|L}T]{[QS]|[NT]}[{I|L}P]TTK 2.7621 - 226 1 2.081 116849.3 0.8399999737739563 1254 3174 4428 DOHH2_400M_050219_2,4430 DOHH2_400M_050219_2,4430,LEKSSRRSK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4431 22.452 164.0 453560.0 25 0 111510.0 + 45433 YTDHQNSSSYY 11 88 682.7733904702724 1363.5322280073449 2 682.7727538943291 MULTI CID FTMS 0 0 0 4428 409385.53125 0.4060401159794309 -2 0.1065235137939453 3 Unmodified _YTDHQNSSSYY_ ENSG00000125398|ENST00000245479|SOX9 55.23464941255904 0.0886405999673349 2 S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QNSSSYY 10 4 71.296 0.0 0.0 5.2288 0.0 0.0 135.06868178535314 0.0 135.06868178535314 0.0 25.85899124866446 0.0 0.0 0 0.5 0.0 2.2134679910804405 0.3807196863200844 S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QNSSSYY 5.2288 - 1052 1 2.081 59999.2 1.0 1255 3174 4428 DOHH2_400M_050219_2,4431 DOHH2_400M_050219_2,4431,YTDHQNSSSYY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4432 22.455 163.0 492880.0 25 0 58849.0 26799 PAPPPPPPP 9 82 433.7421379010297 865.4697228688593 2 433.7421752810478 MULTI CID FTMS 0 0 0 4428 325014.0625 0.4604647056677565 13 -0.6180095672607422 4 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;ENSG00000103495|ENST00000322945|MAZ;ENSG00000105429|ENST00000251268|MEGF8;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139687|ENST00000267163|RB1;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000158195|ENST00000618852|WASF2;ENSG00000165821|ENST00000537235|SALL2;ENSG00000167771|ENST00000301459|RCOR2;ENSG00000169862|ENST00000304623|CTNND2;ENSG00000171634|ENST00000306378|BPTF;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000182601|ENST00000331351|HS3ST4;ENSG00000184937|ENST00000452863|WT1;ENSG00000196367|ENST00000456197|TRRAP;ENSG00000197483|ENST00000598519|ZNF628;ENSG00000205177|ENST00000379011|C11orf91;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000272333|ENST00000420124|KMT2B;ENST00000263228.3_1_9:33817570-33817774:+|nuORF;ENST00000378204.6_1_8:119123785-119123992:-|nuORF;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;ENST00000592092.1_1_19:36224173-36224410:+|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000103495|P56270-2|MAZ;nc|ENSG00000103495|P56270-3|MAZ;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000169862|Q9UQB3-2|CTNND2;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;nc|nan|Q3C1V1-2|C11orf91;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000060749|ENST00000650167|QSER1;REV__ENSG00000077420|ENST00000376236|APBB1IP;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000108819|ENST00000612501|PPP1R9B;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000112320|ENST00000317357|SOBP;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__ENSG00000126464|ENST00000418929|PRR12;REV__ENSG00000136848|ENST00000408936|DAB2IP;REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000168874|ENST00000306279|ATOH8;REV__ENSG00000171450|ENST00000302625|CDK5R2;REV__ENSG00000176058|ENST00000409012|TPRN;REV__ENSG00000176165|ENST00000313071|FOXG1;REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENSG00000182484|ENST00000359512|WASH6P;REV__ENSG00000188620|ENST00000357878|HMX3;REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENSG00000247746|ENST00000500968|USP51;REV__ENSG00000274588|ENST00000611977|DGKK;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000400706.3_1_12:88275-90926:+|nuORF;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;REV__ENST00000557932.5_1_15:102513813-102516466:+|nuORF;REV__ENST00000602719.5_1_16:85784553-85784670:-|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000168874|Q96SQ7-2|ATOH8;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6;REV__nc|ENSG00000234769|A8MWX3|WASH4P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P;REV__nc|ENSG00000292372|Q9NQA3|WASH6P 67.41302359171755 0.0220989861905124 2 [PA]PPPP[YK] 8 3 + 46.916 0.0 0.0 5.4209 5.4209 87.665 0.0 0.0 0.0 13.027646714607355 26.73902187720806 13.027646714607355 14.648867983026506 0 1.2302046884880935 1.6989700043360187 0.0 0.0 [PA]PPPP[YK];[YK]APP[YK];{[HG]|PP}PAPP[YK];{[HG]|PP}APPP[YK];[PA][YK]P[YK];[PA]P[YK][YK];[YK]PAP[YK];{[HG]|PP}PPAP[YK];{[NV]|[RG]}[{M(Oxidation (M))|F}V]P[YK];{[HG]|PP}A[YK][YK] 5.4209;3.7283;3.6613;3.4578;3.2699;2.3657;2.1941;2.1271;0.86756;0.40264 -;-;-;-;-;-;-;-;-;- 114 1 2.081 67566.0 1.0 1256 3174 4428 DOHH2_400M_050219_2,4432 DOHH2_400M_050219_2,4432,PAPPPPPPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4433 22.466 641.0 249700.0 25 0 20674.0 25804 NKQDAVKEL 9 136 522.7876719755977 1043.5607910179954 2 522.7878295779228 MULTI CID FTMS 0 0 0 4428 99745.1484375 0.4346421983343488 -2 0.1065235137939453 5 Unmodified _NKQDAVKEL_ ENSG00000162753|ENST00000367714|SLC9C2 57.72198328787511 0.0273433238377839 2 {[QN]|[E{I|L}]|[KN]}[WQ]VKE{I|L} 8 2 + 79.154 0.0 0.0 7.585 7.585 80.785 0.0 0.0 0.0 13.960287570215243 16.409780573583312 13.960287570215243 0.5115252244738144 0 1.411954370472159 1.3010299956639813 1.2638793319624575 0.6989700043360187 {[QN]|[E{I|L}]|[KN]}[WQ]VKE{I|L};{[QN]|[E{I|L}]|[KN]}A{[QD]|[EN]|[WG]|[KD]|[RS]}VKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}GRDVKE{I|L};[TP]SRDVKE{I|L};{[QN]|[E{I|L}]|[KN]}[PG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]DVKE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]DVKE{I|L};{I|L}{M(Oxidation (M))|F}KV{[QD]|[EN]|[WG]|[KD]|[RS]}PTP;{I|L}{M(Oxidation (M))|F}KV{[QD]|[EN]|[WG]|[KD]|[RS]}TPP;{[QN]|[E{I|L}]|[KN]}A[WK][VG]E{I|L} 7.585;7.536;6.2472;5.2199;5.1477;4.9397;4.7709;4.6665;4.3531;4.2408 -;-;-;-;-;-;-;-;-;- 634 1 2.081 128524.9 1.0 1257 3174 4428 DOHH2_400M_050219_2,4433 DOHH2_400M_050219_2,4433,NKQDAVKEL True False RTPSDVKEL 22.466388 522.787829577923 1153716.875 4428.0 ENST00000495420.5_1_15:69079601-69113141:-|nuORF;;ENSG00000139223|ENST00000266594|ANP32D;;ENSG00000140350|ENST00000465139|ANP32A;;ENST00000560832.1_1_15:35529508-35529652:+|nuORF 3.475729862848917 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4435 22.475 250.0 245860.0 25 0 17941.0 + 12185 GQQFSSFYAHS 11 102 629.7757253405404 1257.5368977478806 2 629.7759277224541 MULTI CID FTMS 0 0 0 4434 203005.40625 0.022022571368317 11 -0.5664558410644531 1 Unmodified _GQQFSSFYAHS_ ENST00000335154.9_1_12:50036614-50037331:-|nuORF 16.149105407346934 0.6992268271266642 2 [AG]AHDEQAQNA{M(Oxidation (M))|F} 12 11 + 70.276 0.0 0.0 5.5884 5.5884 74.227 0.0 0.0 0.0 5.184465535402296 9.124628150806371 5.184465535402296 0.1979531151190627 0 0.8182503180159344 1.5228787452803376 0.3252574989159953 1.25 [AG]AHDEQAQNA{M(Oxidation (M))|F};[AG]AHDEAQQNA{M(Oxidation (M))|F};[AG]AHDEAGAQNA{M(Oxidation (M))|F};[AG]AHDEQANQA{M(Oxidation (M))|F};[AG]AHDEAQNQA{M(Oxidation (M))|F};[QA]HDEAGAQNA{M(Oxidation (M))|F};[AG]AHDEAGANQA{M(Oxidation (M))|F};[HD][QA]EAGAQNA{M(Oxidation (M))|F};[AG]AHDEQAQGGA{M(Oxidation (M))|F};[AG]AHDEQA[AG]NA{M(Oxidation (M))|F} 5.5884;5.5726;5.5237;5.2089;5.1932;5.1761;5.1442;4.88;4.8649;4.8649 -;-;-;-;-;-;-;-;-;- 6619 1 2.079 53130.6 1.0 1258 3175 4434 DOHH2_400M_050219_2,4435 DOHH2_400M_050219_2,4435,GQQFSSFYAHS False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4436 22.489 800.0 158680.0 25 0 15904.0 -1 0 56 859.3686867516051 2575.084230855015 3 859.7037841677666 MULTI CID FTMS 0 0 0 4434 102740.2578125 0.5896908304694235 -1 0.0372295379638671 2 2 DDR 3 -1 11.682 0.0 0.0 0.45367 0.0 0.0 1731.7191141028443 454.18671594791255 2185.905830050757 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DDR 0.45367 - 28 + 1 2.079 92641.0 0.4699999988079071 1259 3175 4434 DOHH2_400M_050219_2,4436 DOHH2_400M_050219_2,4436, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4437 22.49 77.0 804070.0 25 0 43621.0 27042 PEQNDRTPL 9 92 535.2674075957788 1068.5202622583574 2 535.2673217654228 MULTI CID FTMS 0 0 0 4434 697619.6875 0.4619961597984122 -3 0.1437530517578125 3 Unmodified _PEQNDRTPL_ ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;ENST00000544562.5_1_14:23067206-23078652:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4 21.74664581756881 0.2544899275067181 2 [EP]QDTRNP{I|L} 9 3 + 41.257 0.0 0.0 3.8612 3.8612 79.222 0.0 0.0 0.0 20.04608767593865 13.020468848809372 13.020468848809372 9.208187539523747 0 0.0 0.0 0.7742275032520141 0.3494850021680094 [EP]QDTRNP{I|L};[EP]QDTRGGP{I|L};[EP][AG]DTRNP{I|L};[EP][AG]DTRGGP{I|L};[EP]Q{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[QP]P{I|L};[R{M(Oxidation (M))|F}][WK]DK[CS];[R{M(Oxidation (M))|F}]AC(Carbamidomethyl (C))VVK[CS] 3.8612;2.9994;2.9994;2.1417;0.98909;0.97261;0.59526 -;-;-;-;-;-;- 293 + 1 2.079 56307.7 1.0 1260 3175 4434 DOHH2_400M_050219_2,4437 DOHH2_400M_050219_2,4437,PEQNDRTPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4438 22.492 96.0 903880.0 25 0 75661.0 + 4786 DENGKISRL 9 91 516.2776878737973 1030.5408228143945 2 516.2792236208916 MULTI CID FTMS 0 0 0 4434 427756.125 0.0476424030807013 -4 0.1704235076904297 4 Unmodified _DENGKISRL_ ENSG00000143947|ENST00000272317|RPS27A;ENST00000591758.1_1_16:61089351-61089522:-|nuORF 40.72490554402381 0.0714771638475563 2 DENGK{I|L}S[R{I|L}] 9 0 + 82.863 0.0 0.0 8.0407 8.0407 92.408 0.0 0.0 0.0 69.6754349440165 4.137342758552705 4.137342758552705 9.208187539523747 0 1.0021934810768762 2.0 0.0 0.4247425010840047 + + DENGK{I|L}S[R{I|L}];DEGGGK{I|L}S[R{I|L}];DE{I|L}W{I|L}S[R{I|L}];DEN{I|L}[KG]S[R{I|L}];DE{I|L}N[KG]S[R{I|L}];DE{I|L}T{[RE]|[WV]}[R{I|L}];DEGG{I|L}[KG]S[R{I|L}];DE{I|L}GG[KG]S[R{I|L}] 8.0407;7.1472;6.5597;5.5549;4.9826;4.7402;4.6614;4.0891 +;-;-;-;-;-;-;- + 163 + 1 2.079 72709.8 1.0 1261 3175 4434 DOHH2_400M_050219_2,4438 DOHH2_400M_050219_2,4438,DENGKISRL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4439 22.506 800.0 190890.0 25 0 32311.0 + 9593 FLKRKEEEL 9 115 596.3405751748675 1190.6665974165348 2 596.3412963747978 MULTI CID FTMS 0 0 0 4434 142214.4375 1.0 0 0.0 5 Unmodified _FLKRKEEEL_ ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1;nc|ENSG00000179119|Q68D10-3|SPTY2D1 53.40400417844725 0.0329064971918313 2 {I|L}RRKEEE{I|L} 8 2 45.214 0.0 0.0 3.7974 0.0 0.0 119.07394606757968 0.0 119.07394606757968 0.0 33.43169510363835 0.0 0.0 0 0.5796896906561032 0.0 0.7302046884880937 0.0 {I|L}RRKEEE{I|L} 3.7974 - 154 1 2.079 115985.6 0.6499999761581421 1262 3175 4434 DOHH2_400M_050219_2,4439 DOHH2_400M_050219_2,4439,FLKRKEEEL True True FLKRKEEEL 22.506298 596.341296374798 785772.125 4434.0 nc|ENSG00000179119|Q68D10-3|SPTY2D1;;ENSG00000179119|ENST00000336349|SPTY2D1;;nc|ENSG00000179119|Q68D10-2|SPTY2D1;;ENST00000536336.5_1_11:18633859-18655855:-|nuORF 1.8902464310328169 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4440 22.511 254.0 243670.0 25 0 72298.0 + 43342 WNAGTRAQR 9 82 530.2781967236388 0 530.2768432497978 PEAK CID FTMS 0 0 0 4434 116080.578125 0.4729366466081852 52 -1.7100334167480469 6 Unmodified _WNAGTRAQR_ REV__ENST00000491735.1_1_10:1088669-1094992:-|nuORF 13.042465956692816 0.2773713495150148 2 A 1 -1 6.9897 0.0 0.0 0.66031 0.0 0.0 757.4138020392712 227.0677431695922 984.4815452088634 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.66031 + + 16 + 1 2.079 53101.1 1.0 1263 3175 4434 DOHH2_400M_050219_2,4440 DOHH2_400M_050219_2,4440,WNAGTRAQR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4441 22.525 800.0 111930.0 25 0 18916.0 -1 DCRAETSCDTM 11 86 673.2447246339856 1344.474896334771 2 673.2451660037041 MULTI CID FTMS 0 0 0 4434 81491.234375 0.8589685027199341 -1 0.0372295379638671 7 2 Carbamidomethyl (C) _DC(Carbamidomethyl (C))RAETSC(Carbamidomethyl (C))DTM_ ENSG00000198932|ENST00000537097|GPRASP1 19.361941925380144 0.6323962752489956 2 YSDE 4 -1 58.805 0.0 0.0 4.3738 0.0 0.0 0.0 847.2888277643186 847.2888277643186 43.62756757724155 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.2887254899964357 0.0 YSDE 4.3738 - 188 + 1 2.079 68540.7 0.5199999809265137 1264 3175 4434 DOHH2_400M_050219_2,4441 DOHH2_400M_050219_2,4441,DCRAETSCDTM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4442 22.529 245.0 245020.0 25 0 44883.0 41396 VPLCPLAL 8 91 413.24815534646746 824.4817577597349 2 413.2486450076103 MULTI CID FTMS 0 0 0 4434 92266.0 1.0 0 0.0 8 Unmodified _VPLCPLAL_ ENSG00000174485|ENST00000443035|DENND4A;ENST00000568515.1_1_15:66007788-66048788:-|nuORF;nc|ENSG00000174485|Q7Z401-2|DENND4A;nc|ENSG00000174485|Q7Z401|DENND4A 6.354104778181461 0.7857632046190106 2 {I|L} 1 7 13.979 0.0 0.0 1.6955 0.0 0.0 693.3867240456709 0.0 693.3867240456709 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.6955 + + 32 + 1 2.079 50930.8 1.0 1265 3175 4434 DOHH2_400M_050219_2,4442 DOHH2_400M_050219_2,4442,VPLCPLAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4443 22.539 499.0 301400.0 25 0 107130.0 + 40277 VGVAAFIVIV 10 99 494.3147980911802 0 494.3152953982353 PEAK CID FTMS 0 0 0 4434 121588.1640625 0.8801828063738478 1 -0.0768241882324218 9 Unmodified _VGVAAFIVIV_ REV__ENSG00000136040|ENST00000258526|PLXNC1;REV__ENST00000549810.1_1_12:94645207-94649700:+|nuORF 1.844237919475145 0.3961065659209837 2 T 1 -1 5.4846 0.0 0.0 0.5559 0.0 0.0 800.4782920057995 82.06702600650624 882.5453180123058 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.5559 - 27 + 1 2.079 119830.0 1.0 1266 3175 4434 DOHH2_400M_050219_2,4443 DOHH2_400M_050219_2,4443,VGVAAFIVIV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4444 22.543 195.0 187940.0 25 0 9690.8 + -1 ANGMMNRFWQ 10 74 635.7760082791685 1269.537463625137 2 636.2781249880791 MULTI CID FTMS 0 0 0 4434 102696.5625 0.356284478133208 -2 0.0859718322753906 10 Oxidation (M) _ANGM(Oxidation (M))MNRFWQ_ REV__ENSG00000198885|ENST00000439118|ITPRIPL1;REV__nc|ENSG00000198885|Q6GPH6-2|ITPRIPL1;REV__nc|ENSG00000198885|Q6GPH6-3|ITPRIPL1 10.073929032068715 0.6785112666868882 2 {[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F} 11 -1 + 68.817 0.0 0.0 5.4207 5.4207 83.687 0.0 0.0 0.0 9.029773710679294 20.677517842668426 9.029773710679294 9.128498242810991 0 0.805462187404089 1.154901959985743 0.3252574989159953 0.0 {[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAEQ[PS]{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQE[PS]{M(Oxidation (M))|F};{[QG]|[NA]}GA{[QC]|[C(Carbamidomethyl (C))A]}T{M(Oxidation (M))|F}Q[PS]{M(Oxidation (M))|F};{[QG]|[NA]}GA{[QC]|[C(Carbamidomethyl (C))A]}THHNA{M(Oxidation (M))|F};{[QG]|[NA]}G{[YC]|[HE]}HHHNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{[QC]|[C(Carbamidomethyl (C))A]}T{M(Oxidation (M))|F}Q[PS]{M(Oxidation (M))|F} 5.4207;4.7016;4.7016;4.7016;4.6551;4.4179;4.0505;3.8134;3.3359;3.2544 -;-;-;-;-;-;-;-;-;- 671 1 2.079 31267.1 1.0 1267 3175 4434 DOHH2_400M_050219_2,4444 DOHH2_400M_050219_2,4444,ANGMMNRFWQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4446 22.548 28.0 1869900.0 25 0 208020.0 + 803 AESPAGHSF 9 75 451.70378265263696 901.393012372074 2 451.7036620974541 MULTI CID FTMS 0 0 0 4445 2311848.5 0.9326473165974296 1 -0.0550155639648437 1 Unmodified _AESPAGHSF_ ENSG00000136699|ENST00000680298|SMPD4;ENST00000438378.2_1_2:132275414-132277996:+|nuORF;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;nc|ENSG00000136699|Q9NXE4-10|SMPD4;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4-5|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;nc|ENSG00000136699|Q9NXE4-7|SMPD4;nc|ENSG00000136699|Q9NXE4-8|SMPD4;nc|ENSG00000136699|Q9NXE4-9|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4 92.8221339359638 0.0138398038803217 2 {[CP]|[EA]}SPAGHS{M(Oxidation (M))|F} 9 0 + 62.264 0.0 0.0 6.9076 6.9076 86.449 0.0 0.0 0.0 31.54635730739556 16.867355479190067 16.867355479190067 6.355129762210922 0 1.0 0.0 1.8441876774005248 0.0 + + {[CP]|[EA]}SPAGHS{M(Oxidation (M))|F};{[CP]|[EA]}SPQHS{M(Oxidation (M))|F};[HQ]PSYA{[CP]|[EA]};{[HG]|PP}APSYA{[CP]|[EA]};[HQ]PS{M(Oxidation (M))|F}S{[CP]|[EA]};{[HG]|PP}APS{M(Oxidation (M))|F}S{[CP]|[EA]};[HQ]PSS{M(Oxidation (M))|F}{[CP]|[EA]};{[HG]|PP}APSS{M(Oxidation (M))|F}{[CP]|[EA]};[PS][HQ]YA{[CP]|[EA]};[HQ]SPYA{[CP]|[EA]} 6.9076;6.2025;2.9798;2.9231;2.7844;2.7277;2.6458;2.5891;2.2769;2.1165 +;-;-;-;-;-;-;-;-;- + 315 + 1 2.079 46619.2 1.0 1268 3176 4445 DOHH2_400M_050219_2,4446 DOHH2_400M_050219_2,4446,AESPAGHSF True True AESPAGHSF 22.547819 451.703662097454 50408436.0 4445.0 ENST00000438378.2_1_2:132275414-132277996:+|nuORF;;nc|ENSG00000136699|Q9NXE4-9|SMPD4;;nc|ENSG00000136699|Q9NXE4-4|SMPD4;;nc|ENSG00000136699|Q9NXE4-5|SMPD4;;nc|ENSG00000136699|Q9NXE4-3|SMPD4;;nc|ENSG00000136699|Q9NXE4-8|SMPD4;;ENSG00000136699|ENST00000680298|SMPD4;;nc|ENSG00000136699|Q9NXE4-7|SMPD4;;nc|ENSG00000136699|Q9NXE4-6|SMPD4;;nc|ENSG00000136699|Q9NXE4-2|SMPD4;;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;;nc|ENSG00000136699|Q9NXE4|SMPD4;;nc|ENSG00000136699|Q9NXE4-10|SMPD4 9.479369481404625 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4447 22.557 545.0 172560.0 25 0 21844.0 + 26883 PDFALASPQY 10 116 554.7676000574122 1107.5206471816243 2 554.7681152224541 MULTI CID FTMS 0 0 0 4445 85966.6015625 0.0325510510501271 10 -0.4896316528320312 2 Unmodified _PDFALASPQY_ REV__ENSG00000164506|ENST00000321680|STXBP5;REV__nc|ENSG00000164506|Q5T5C0-2|STXBP5;REV__nc|ENSG00000164506|Q5T5C0-3|STXBP5 43.85829265575387 0.1168243637355526 2 [DP][WR]{M(Oxidation (M))|F}[QP]Y 8 -1 + 31.137 0.0 0.0 2.8114 2.8114 78.127 0.0 0.0 0.0 1.4709969530883882 17.426609503452184 1.4709969530883882 10.740312677277185 0 0.8494850021680094 1.0 1.1549471895720984 0.0 [DP][WR]{M(Oxidation (M))|F}[QP]Y;[NP]V[EP]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}Y;[NP]V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WWY;[NP]V[QT]GS{[QD]|[EN]|[WG]|[KD]|[RS]}Y;[VP]N[EP]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}Y;[VP]N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WWY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P[C(Carbamidomethyl (C))K][HV][NP] 2.8114;1.8416;1.753;1.1248;0.64377;0.55517;0.016245 -;-;-;-;-;-;- 339 1 2.079 76727.6 1.0 1269 3176 4445 DOHH2_400M_050219_2,4447 DOHH2_400M_050219_2,4447,PDFALASPQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4448 22.559 51.0 1896100.0 25 0 140940.0 + 7293 EEVHDLERKY 10 98 439.8861757564299 1316.6366978694898 3 439.8858520388603 MULTI CID FTMS 0 0 0 4445 1012848.0 0.0993638484007917 -3 0.1627960205078125 3 Unmodified _EEVHDLERKY_ ENSG00000187109|ENST00000618691|NAP1L1;ENSG00000205531|ENST00000380542|NAP1L4;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000205531|Q99733-2|NAP1L4 65.47368725323818 0.0222277162070287 2 EEVHD{I|L}ERKY 10 0 + 73.523 0.0 0.0 5.5842 5.5842 88.412 0.0 0.0 0.0 38.34121882396211 14.146518864155126 14.146518864155126 15.0 0 0.7614393726401688 1.154901959985743 0.4247425010840047 0.6747425010840047 + + EEVHD{I|L}ERKY;EEVHD{I|L}EY[RK];[HV]E[KT]{I|L}DHV[HC];[HV][KT]E{I|L}DHV[HC];EEVHY{[HG]|PP}RKY;EEVHDY{[QN]|[E{I|L}]|[KN]}[RK];EEVHYD{[QN]|[E{I|L}]|[KN]}[RK];EEV[RV]{I|L}DTHGY;EEVYHD{[QN]|[E{I|L}]|[KN]}[RK];EEVYH{[HG]|PP}RKY 5.5842;4.4449;3.7733;3.7733;3.6853;3.48;3.4402;3.1544;3.135;3.0575 +;-;-;-;-;-;-;-;-;- + 536 + 1 2.079 81784.8 1.0 1270 3176 4445 DOHH2_400M_050219_2,4448 DOHH2_400M_050219_2,4448,EEVHDLERKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4449 22.561 90.0 758020.0 25 0 141580.0 -1 AGADHIITM 9 92 472.728958385174 943.443363837148 2 472.7289916872978 MULTI CID FTMS 0 0 0 4445 380811.96875 0.3518208326957666 -4 0.2205772399902343 4 Oxidation (M) _AGADHIITM(Oxidation (M))_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 21.74664581756881 0.2544899275067181 2 {[YC]|[HE]}{I|L}AQVT{M(Oxidation (M))|F} 8 -1 + 40.182 0.0 0.0 4.2591 4.2591 70.083 0.0 0.0 0.0 6.989700043360188 9.363044005075736 6.989700043360188 0.7918124604762511 0 0.0 0.0 0.3807196863200844 0.0 {[YC]|[HE]}{I|L}AQVT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}QAVT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}AGAVT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}{I|L}{[QG]|[NA]}T{M(Oxidation (M))|F};[H{I|L}]DQA{I|L}T{M(Oxidation (M))|F};[H{I|L}]DAQ{I|L}T{M(Oxidation (M))|F};[H{I|L}]DAGA{I|L}T{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}YQA{I|L}T{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}YAQ{I|L}T{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}YAGA{I|L}T{M(Oxidation (M))|F} 4.2591;4.1752;4.121;3.6507;3.2667;3.1828;3.1285;3.0787;2.9948;2.9406 -;-;-;-;-;-;-;-;-;- 244 + 1 2.079 57054.6 1.0 1271 3176 4445 DOHH2_400M_050219_2,4449 DOHH2_400M_050219_2,4449,AGADHIITM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4450 22.565 256.0 350920.0 25 0 22566.0 + 23436 LTEVNKAGTQY 11 108 612.3170950897488 1222.6196372462975 2 612.3175536990166 MULTI CID FTMS 0 0 0 4445 305757.6875 0.1452755741834096 -3 0.1627960205078125 5 Unmodified _LTEVNKAGTQY_ ENSG00000170542|ENST00000380698|SERPINB9 101.5434397834973 0.0014376440060606 2 {I|L}TEVNKQTQY 10 2 + 109.73 0.0 0.0 8.975 8.975 90.705 0.0 0.0 0.0 69.3474998413484 19.035984316004217 19.035984316004217 7.513487579716767 0 1.1307196863200843 2.0 0.75 1.579689690656103 {I|L}TEVNKQTQY;{I|L}TEV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TQY;{I|L}TEVNK[AG]TQY;{I|L}TEVGGKQTQY;{I|L}TEVNKQT[AG]Y;{I|L}TEVGGK[AG]TQY;{I|L}TEVN[HS]V{I|L}[DP];{I|L}TEV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}T[AG]Y;{I|L}TEVGGKQT[AG]Y;{I|L}TEVNK[AG]T[AG]Y 8.975;8.3604;8.2254;8.2254;7.6282;7.4788;7.0332;7.0136;6.8815;6.8815 -;-;+;-;-;-;-;-;-;- + 5162 + 1 2.079 71614.3 1.0 1272 3176 4445 DOHH2_400M_050219_2,4450 DOHH2_400M_050219_2,4450,LTEVNKAGTQY True True LTEVNKAGTQY 22.565467 612.317553699017 19118918.0 4445.0 ENSG00000170542|ENST00000380698|SERPINB9 8.253133455912272 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4451 22.579 800.0 313510.0 25 0 29292.0 + 7295 EEVHDLERKY 10 115 659.3256261918211 1316.6366994504422 2 659.3244506716728 MULTI CID FTMS 0 0 0 4445 190128.3125 0.0837034067408409 -3 0.1627960205078125 6 Unmodified _EEVHDLERKY_ ENSG00000187109|ENST00000618691|NAP1L1;ENSG00000205531|ENST00000380542|NAP1L4;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000205531|Q99733-2|NAP1L4 143.21322497773306 0.00010449669748 2 EEVHD{I|L}ERKY 10 0 + 124.54 0.0 0.0 9.4591 9.4591 98.549 0.0 0.0 0.0 32.79885926180398 90.25264802391148 32.79885926180398 34.785925394747395 0 3.788725489996436 1.3979400086720375 2.754432191740108 0.3807196863200844 + + EEVHD{I|L}ERKY;[HV]EED{I|L}ERKY;[HD]{I|L}ED{I|L}ERKY;Y{[HG]|PP}HD{I|L}E[VG]KY;{[ET]|[MV]}[YT]D{I|L}ERKY;[HV]DEE{I|L}ERKY;[HV][KT]E{I|L}DHV[HC];[QA]{[SA]|[TG]}HD{I|L}E[VG]KY;[HV]ETK{I|L}DHV[HC];EEVH[RK]VEEY 9.4591;6.8171;6.1913;6.1838;5.6257;5.5437;5.355;5.2445;5.2377;5.1873 +;-;-;-;-;-;-;-;-;- + 1651 1 2.079 181320.9 0.75 1273 3176 4445 DOHH2_400M_050219_2,4451 DOHH2_400M_050219_2,4451,EEVHDLERKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4452 22.584 280.0 226040.0 25 0 21236.0 23581 LTNIHSLS 8 111 442.74528373645256 883.4760145397051 2 442.7444335818291 MULTI CID FTMS 0 0 0 4445 146816.03125 0.5749362696393592 -3 0.1627960205078125 7 Unmodified _LTNIHSLS_ ENSG00000275410|ENST00000617811|HNF1B;nc|ENSG00000275410|P35680-2|HNF1B;nc|ENSG00000275410|P35680-4|HNF1B 30.22481116460888 0.4082965392918993 2 EV 2 8 22.528 0.0 0.0 2.55 0.0 0.0 0.0 652.3336275690061 652.3336275690061 5.762495684687735 0.0 0.0 0.0 0 0.1382104921644452 0.9208187539523752 0.0 0.0 EV 2.55 - 199 + 1 2.079 51793.7 1.0 1274 3176 4445 DOHH2_400M_050219_2,4452 DOHH2_400M_050219_2,4452,LTNIHSLS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4453 22.598 800.0 142840.0 25 0 21361.0 5406 DLLAWWPNPQ 10 106 620.3132283273969 1238.6119037215938 2 620.3123657107353 MULTI CID FTMS 0 0 0 4445 88481.4453125 0.1181878310798497 -33 1.0876598358154297 8 Unmodified _DLLAWWPNPQ_ ENSG00000160161|ENST00000291495|CILP2 10.073929032068715 0.6785112666868882 2 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP[QP]N 12 6 {NN|[MP]|[D{I|L}]|[EV]}PA + + 45.594 8.18 2.0647 3.681 3.681 50.686 0.0 0.0 0.0 0.0 29.73017248164013 0.0 0.0 0 2.1861818737241734 0.0 0.0 0.8818108876706969 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP[QP]N 3.681 - 1474 + 1 2.079 87506.7 0.5299999713897705 1275 3176 4445 DOHH2_400M_050219_2,4453 DOHH2_400M_050219_2,4453,DLLAWWPNPQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4455 22.603 139.0 706930.0 25 0 87355.0 -1 0 59 644.7781181534184 2575.083366747273 4 645.0289794802666 MULTI CID FTMS 0 0 0 4454 354162.375 0.6683226329651853 1 -0.0189495086669921 1 2 D 1 -1 11.99 0.0 0.0 0.4656 0.0 0.0 1731.717644714263 725.3163199813775 2457.033964695641 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 D 0.4656 - 11 + 1 2.079 81573.4 1.0 1276 3177 4454 DOHH2_400M_050219_2,4455 DOHH2_400M_050219_2,4455, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4456 22.617 800.0 131570.0 25 0 8990.5 31468 RPSQERGQSQG 11 130 615.3028238436586 1228.5910947541172 2 615.3035766482353 MULTI CID FTMS 0 0 0 4454 122713.5390625 0.636353990544062 1 -0.0189495086669921 2 Unmodified _RPSQERGQSQG_ ENST00000338779.10_1_16:70697408-70697537:-|nuORF 32.037481411007896 0.3399527776090619 2 {[QN]|[E{I|L}]|[KN]}[RD]T[VP]QSAN 11 9 + 68.187 0.0 0.0 5.55 5.55 79.847 0.0 0.0 0.0 12.319172075335445 51.98931847404539 12.319172075335445 4.546835677101441 0 1.2302046884880935 1.0457574905606752 1.7491348669726234 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}[RD]T[VP]QSAN;{[QN]|[E{I|L}]|[KN]}WW[VP]QSAN;{[QN]|[E{I|L}]|[KN]}[RD]{I|L}[PS]QSAN;{[QN]|[E{I|L}]|[KN]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[VP]QSAN;[PS]QH{M(Oxidation (M))|F}[{I|L}T]QSAN;[HV][YN]T[VP]QSAN;[PS]QH{M(Oxidation (M))|F}[WR]SAN;[PS]Q[WK][PS]QSAN;{[ET]|[MV]}[HK]T[{I|L}T]QSAN;[PS]Q{[RE]|[WV]}{[NV]|[RG]}QSAN 5.55;5.1799;4.9489;4.8368;4.0427;3.944;3.6608;3.6399;3.6195;3.5382 -;-;-;-;-;-;-;-;-;- 1161 1 2.079 81198.2 0.7799999713897705 1277 3177 4454 DOHH2_400M_050219_2,4456 DOHH2_400M_050219_2,4456,RPSQERGQSQG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4458 22.622 89.0 865940.0 25 0 61509.0 + 29335 QIRPDRQTL 9 99 376.215429939381 1125.624460418343 3 376.2154113650322 MULTI CID FTMS 0 0 0 4457 575603.1875 0.675009914812866 -1 0.0189495086669921 1 Unmodified _QIRPDRQTL_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000581551.1_1_17:62499042-62499524:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5 42.83518252547288 0.0598927335801051 2 T{I|L} 2 7 25.701 0.0 0.0 2.2833 0.0 0.0 893.482456866083 0.0 893.482456866083 0.0 7.201140738196013 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + T{I|L} 2.2833 + + 100 1 2.079 70117.1 1.0 1278 3178 4457 DOHH2_400M_050219_2,4458 DOHH2_400M_050219_2,4458,QIRPDRQTL True True QIRPDRQTL 22.621783 376.2157 5203265.5 4457.0 ENST00000432525.5_1_22:38886367-38903636:-|nuORF;;ENST00000581551.1_1_17:62499042-62499524:-|nuORF;;nc|ENSG00000100201|Q92841-1|DDX17;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5;;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;;ENSG00000100201|ENST00000403230|DDX17;;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;;nc|ENSG00000100201|Q92841-3|DDX17;;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;;nc|ENSG00000100201|Q92841-2|DDX17 5.461090564727783 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4459 22.636 800.0 161560.0 25 0 12601.0 + 23393 LTDTPKATSY 10 141 548.7797492683824 1095.5449456035649 2 548.7791015505791 MULTI CID FTMS 0 0 0 4457 129625.3984375 0.6621214990812454 -3 0.1507892608642578 2 Unmodified _LTDTPKATSY_ ENST00000460810.1_1_3:122081873-122084409:-|nuORF;ENST00000466854.5_1_3:122081873-122084420:-|nuORF 107.5634045930896 0.0042230779264997 2 {I|L}TDT[HM]TAP 9 5 84.72 0.0 0.0 7.7332 0.0 0.0 0.0 125.07250391177968 125.07250391177968 34.71751042497134 0.0 0.0 0.0 0 1.1549471895720984 2.0 1.8979400086720373 0.0 {I|L}TDT[HM]TAP 7.7332 - 2639 + 1 2.079 99941.3 0.5799999833106995 1279 3178 4457 DOHH2_400M_050219_2,4459 DOHH2_400M_050219_2,4459,LTDTPKATSY True True LTDTPKATSY 22.635614 548.779101550579 1221265.75 4457.0 ENST00000466854.5_1_3:122081873-122084420:-|nuORF;;ENST00000460810.1_1_3:122081873-122084409:-|nuORF 8.269382953643799 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4460 22.649 800.0 230130.0 25 0 18042.0 + + -1 VEGEGEEEGEEY 12 133 678.2601594960884 1354.5057660589766 2 678.2596313357353 MULTI CID FTMS 0 0 0 4457 189579.109375 0.3966730443087342 -2 0.0739650726318359 3 Carbamidomethyl (C) _TEC(Carbamidomethyl (C))SSSYMVEY_ ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000123416|ENST00000336023|TUBA1B;nc|ENSG00000123416|P68363-2|TUBA1B 32.78568957990786 0.3235288296534633 2 {[DA]|[EG]}EEGEVEGEEY 12 -1 + 117.13 0.0 0.0 8.6475 8.6475 84.169 0.0 0.0 0.0 2.161903266879719 16.611814434466183 2.161903266879719 1.9453781259591096 0 1.055462187404089 1.0969100130080565 3.9846368802282015 0.0 {[DA]|[EG]}EEGEVEGEEY;{[DA]|[EG]}EEGVEEGEEY;{[DA]|[EG]}EGEEVEGEEY;EEGEGEVEGEEY;{[DA]|[EG]}EEEGVEGEEY;{[DA]|[EG]}EGEVEEGEEY;EEGEGVEEGEEY;EEGGEEVEGEEY;EEGEEGVEGEEY;EEGGEVEEGEEY 8.6475;8.5039;8.4997;8.4879;8.4252;8.3561;8.3443;8.3401;8.2656;8.1965 -;-;-;-;-;-;-;-;-;- 40321 1 2.079 134546.5 0.7300000190734863 1280 3178 4457 DOHH2_400M_050219_2,4460 DOHH2_400M_050219_2,4460,TECSSSYMVEY False False VEGEGEEEGEEY 22.649454 678.259631335735 2545614.5 4457.0 ENSG00000167552|ENST00000301071|TUBA1A;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;ENSG00000123416|ENST00000336023|TUBA1B;;nc|ENSG00000123416|P68363-2|TUBA1B 2.8953584829966226 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4461 22.653 213.0 357760.0 25 0 63856.0 + + 1086 QENQDPRRW 9 99 410.1977359014575 1227.5713783045726 3 410.1988403201103 MULTI CID FTMS 0 0 0 4457 92852.0 0.3839391995650023 -3 0.1507892608642578 4 Unmodified _AGLFFCEPLMT_ nc|ENSG00000135451|Q12815-3|TROAP;chr12:49324037-49324231|48|20.44|0.88|4.54|+|ENST00000548311|TROAP,TROAP;chr12:49324037-49324155|48|11.94|0.5|4.57|+|ENST00000380327|TROAP,TROAP;nc|ENSG00000135451|Q12815-2|TROAP;ENSG00000135451|ENST00000257909|TROAP 5.296884461304476 0.8501568894076437 2 QE 2 -1 23.029 0.0 0.0 1.876 0.0 0.0 0.0 967.4478968252438 967.4478968252438 7.764662139152456 0.0 0.0 0.0 0 0.2059771852360797 0.0 0.0 0.0 QE 1.876 - 36 + 1 2.079 69648.5 1.0 1281 3178 4457 DOHH2_400M_050219_2,4461 DOHH2_400M_050219_2,4461,AGLFFCEPLMT False False QENQDPRRW 22.653485 410.19884032011 1569075.0 4457.0 nc|ENSG00000135451|Q12815-3|TROAP;;chr12:49324037-49324231|48|20.44|0.88|4.54|+|ENST00000548311|TROAP,TROAP;;chr12:49324037-49324155|48|11.94|0.5|4.57|+|ENST00000380327|TROAP,TROAP;;nc|ENSG00000135451|Q12815-2|TROAP;;ENSG00000135451|ENST00000257909|TROAP 0.8401375611623129 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4462 22.656 140.0 898320.0 25 0 199410.0 + 36940 TEVTGHRW 8 108 493.2458440187874 984.4771351043748 2 493.2420532107353 MULTI CID FTMS 0 0 0 4457 322520.5 0.0967337706421619 -4 0.188018798828125 5 Unmodified _TEVTGHRW_ chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;ENSG00000172270|ENST00000333511|BSG;ENST00000576925.3_1_19:572634-579657:+|nuORF;nc|ENSG00000172270|P35613-2|BSG 71.13359017698441 0.1103988542940256 2 {[TV]|[{I|L}S]}E[QP]TV[DP] 9 7 + 48.46 0.0 0.0 4.9224 4.9224 80.03 0.0 0.0 0.0 6.487222515216082 22.26222870842836 6.487222515216082 6.73393743112328 0 0.7742275032520141 0.8860566476931632 0.5 0.8494850021680094 {[TV]|[{I|L}S]}E[QP]TV[DP];{[TV]|[{I|L}S]}E[PA]GTV[DP];{[TV]|[{I|L}S]}ET[QP]V[DP];{[ET]|[MV]}V[QP]TV[DP];{[TV]|[{I|L}S]}E[PG]ATV[DP];[DP]V[VS]GTV[DP];{[ET]|[MV]}{I|L}[NP]TV[DP];{[ET]|[MV]}V[PA]GTV[DP];{[ET]|[MV]}VT[QP]V[DP];[DP]V[TA]ATV[DP] 4.9224;4.2384;4.2344;4.0651;3.7538;3.5257;3.5026;3.3811;3.3771;3.041 -;-;-;-;-;-;-;-;-;- 695 1 2.079 98965.2 1.0 1282 3178 4457 DOHH2_400M_050219_2,4462 DOHH2_400M_050219_2,4462,TEVTGHRW True True TEVTGHRW 22.656301 493.242053210735 32064016.0 4457.0 ENSG00000172270|ENST00000333511|BSG;;chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;;ENST00000576925.3_1_19:572634-579657:+|nuORF;;nc|ENSG00000172270|P35613-2|BSG 8.36717955271403 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4463 22.661 228.0 347900.0 25 0 66151.0 + 5541 DMKQQHVI 8 93 499.75848718050673 0 499.7578307986259 PEAK CID FTMS 0 0 0 4457 196001.390625 1.0 0 0.0 6 Unmodified _DMKQQHVI_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 30.63653989081413 0.224386698648925 2 HM[C(Carbamidomethyl (C))N]PG 6 7 18.862 0.0 0.0 1.8909 0.0 0.0 230.164322794522 68.05135523013905 298.21567802466103 0.0 0.0 0.0 0.0 0 0.9476212463643424 0.0 0.0 0.0 HM[C(Carbamidomethyl (C))N]PG 1.8909 - 65 + 1 2.079 68074.2 1.0 1283 3178 4457 DOHH2_400M_050219_2,4463 DOHH2_400M_050219_2,4463,DMKQQHVI False True DMKQQHVI 22.660583 499.757830798626 819464.75 4457.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 6.740266005198161 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4464 22.674 800.0 50766.0 25 0 14266.0 -1 0 38 1124.4392808739008 3370.2960132219023 3 1124.772265613079 MULTI CID FTMS 0 0 0 4457 105369.390625 0.2082319676924366 11 -0.5184192657470703 7 2 NE 2 -1 8.5835 0.0 0.0 0.25468 0.0 0.0 2600.0142271885024 524.1643160455686 3124.178543234071 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NE 0.25468 - 5 + 1 2.079 45810.2 0.4300000071525574 1284 3178 4457 DOHH2_400M_050219_2,4464 DOHH2_400M_050219_2,4464, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4466 22.68 107.0 725060.0 25 0 120630.0 + 7239 EESDLSRQY 9 87 563.7547268548255 1125.494900776451 2 563.7551147341728 MULTI CID FTMS 0 0 0 4465 420921.65625 0.3177492944379089 3 -0.130502700805664 1 Unmodified _EESDLSRQY_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 47.74868867922204 0.0453060283459952 2 EESD{I|L}S[RP]E 9 2 59.702 0.0 0.0 5.3045 0.0 0.0 0.0 80.01492487125233 80.01492487125233 44.48515608797898 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.3054621874040891 1.055462187404089 EESD{I|L}S[RP]E 5.3045 - 250 + 1 2.079 61876.1 1.0 1285 3179 4465 DOHH2_400M_050219_2,4466 DOHH2_400M_050219_2,4466,EESDLSRQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4467 22.694 800.0 98158.0 25 0 7124.8 -1 QNCTMVFSSY 10 124 626.7518843709418 1251.4892158086834 2 626.7525512576103 MULTI CID FTMS 0 0 0 4465 44190.625 0.0170258620689655 18 -0.7388019561767578 2 Carbamidomethyl (C),Oxidation (M) _QNC(Carbamidomethyl (C))TM(Oxidation (M))VFSSY_ ENSG00000170175|ENST00000306071|CHRNB1;ENST00000573209.1_1_17:7350776-7358776:+|nuORF;nc|ENSG00000170175|P11230-2|CHRNB1 10.073929032068715 0.6785112666868882 2 AAR{[{M(Oxidation (M))|F}C]|[YS]}[MN]CSSY 11 -1 AAR{[{M(Oxidation (M))|F}C]|[YS]}[MN]C + + 26.242 -8.9771 -1.0015 2.0969 2.0969 47.55 0.0 0.0 0.0 0.0 14.648415687162952 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 AAR{[{M(Oxidation (M))|F}C]|[YS]}[MN]CSSY 2.0969 - 314 + 1 2.079 60043.5 0.5699999928474426 1286 3179 4465 DOHH2_400M_050219_2,4467 DOHH2_400M_050219_2,4467,QNCTMVFSSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4468 22.698 233.0 293600.0 25 0 20731.0 + 6760 EDVETSKKW 9 101 561.2773696969864 1120.5401864607727 2 561.2777587771416 MULTI CID FTMS 0 0 0 4465 182900.875 0.5015222629130139 -3 0.1310577392578125 3 Unmodified _EDVETSKKW_ ENSG00000107223|ENST00000224073|EDF1;nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1 63.960520009940105 0.0238892913700936 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VETSKKW 9 0 + 60.635 0.0 0.0 5.4112 5.4112 74.574 0.0 0.0 0.0 41.9097075388318 12.98332479720628 12.98332479720628 0.7918124604762511 0 1.274227503252014 0.0 0.4247425010840047 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VETSKKW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VESTKKW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V[WM]KKW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WE]TKKW;{[CT]|[{M(Oxidation (M))|F}G]}KKST[HM]W;{[CT]|[{M(Oxidation (M))|F}G]}[HM]STKKW;{[CT]|[{M(Oxidation (M))|F}G]}KKST{[{M(Oxidation (M))|F}C]|[YS]}{[CT]|[{M(Oxidation (M))|F}G]};{[CT]|[{M(Oxidation (M))|F}G]}KKTS{[{M(Oxidation (M))|F}C]|[YS]}{[CT]|[{M(Oxidation (M))|F}G]};KK[YQ]T[HM]W 5.4112;5.3406;3.6731;2.6668;2.5614;2.4908;1.6218;1.5511;0.73844 +;-;-;-;-;-;-;-;- + 337 + 1 2.079 57352.3 1.0 1287 3179 4465 DOHH2_400M_050219_2,4468 DOHH2_400M_050219_2,4468,EDVETSKKW True True EDVETSKKW 22.697978 561.277758777142 1793181.875 4465.0 ENSG00000107223|ENST00000224073|EDF1;;nc|ENSG00000107223|O60869-2|EDF1;;nc|ENSG00000107223|O60869-3|EDF1 8.298644542694092 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4469 22.712 800.0 248090.0 25 0 15216.0 + -1 YQYCQAYYTMQ 11 110 767.8056527034026 1533.5967524736052 2 767.8066284060478 MULTI CID FTMS 0 0 0 4465 164301.359375 0.3278119134852061 -3 0.1310577392578125 4 Carbamidomethyl (C),Oxidation (M) _YQYC(Carbamidomethyl (C))QAYYTM(Oxidation (M))Q_ REV__ENSG00000097033|ENST00000370558|SH3GLB1;REV__nc|ENSG00000097033|Q9Y371-2|SH3GLB1;REV__nc|ENSG00000097033|Q9Y371-3|SH3GLB1 4.5288652416199255 0.8537804541365391 2 [YE]A[H{I|L}]{I|L}TAE 9 -1 59.821 0.0 0.0 3.9007 0.0 0.0 0.0 503.089641496781 503.089641496781 16.411713991494764 0.0 0.0 0.0 0 0.0 2.0 2.173877368056628 0.0 [YE]A[H{I|L}]{I|L}TAE 3.9007 - 4479 1 2.079 143962.2 0.6800000071525574 1288 3179 4465 DOHH2_400M_050219_2,4469 DOHH2_400M_050219_2,4469,YQYCQAYYTMQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4471 22.724 588.0 183970.0 25 0 38295.0 + 45434 YTDHQNSSSYY 11 118 682.7733904702724 1363.5322280073449 2 682.7729369997978 MULTI CID FTMS 0 0 0 4470 248801.421875 0.2467682672748888 4 -0.2242107391357422 1 Unmodified _YTDHQNSSSYY_ ENSG00000125398|ENST00000245479|SOX9 47.7319792270244 0.130190323903946 2 S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QNSSSYY 10 4 71.477 0.0 0.0 5.2421 0.0 0.0 135.06875807929845 0.0 135.06875807929845 0.0 44.52684409496328 0.0 0.0 0 0.9247425010840048 0.0 2.0114393726401687 0.0 S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QNSSSYY 5.2421 - 1245 1 2.079 78372.7 1.0 1289 3180 4470 DOHH2_400M_050219_2,4471 DOHH2_400M_050219_2,4471,YTDHQNSSSYY False True YTDHQNSSSYY 22.72433 682.772936999798 11872743.0 4470.0 ENSG00000125398|ENST00000245479|SOX9 7.540752251942952 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4472 22.728 181.0 509500.0 25 0 93198.0 + 29336 QIRPDRQTL 9 94 563.8200017786658 0 563.8201782107353 PEAK CID FTMS 0 0 0 4470 272131.25 0.8830951103432827 1 -0.051727294921875 2 Unmodified _QIRPDRQTL_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000581551.1_1_17:62499042-62499524:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5 12.174745833636583 0.2873249122352864 2 KSD{I|L}[KP]DE 8 8 31.177 0.0 0.0 2.7698 0.0 0.0 130.10237296131578 80.01499353580311 210.1173664971189 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3054621874040891 KSD{I|L}[KP]DE 2.7698 - 111 + 1 2.079 73539.2 1.0 1290 3180 4470 DOHH2_400M_050219_2,4472 DOHH2_400M_050219_2,4472,QIRPDRQTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4473 22.735 425.0 239550.0 25 0 32855.0 + 523 AEHPELRSY 9 99 551.2701947185634 1100.5258365039267 2 551.2709228396416 MULTI CID FTMS 0 0 0 4470 135401.03125 0.4430194951428038 -2 0.0944881439208984 3 Unmodified _AEHPELRSY_ ENSG00000136193|ENST00000242059|SCRN1;nc|ENSG00000136193|Q12765-2|SCRN1;nc|ENSG00000136193|Q12765-3|SCRN1 34.93206674587334 0.1032771302489716 2 {[CP]|[EA]}HPE{I|L}RSY 9 0 + 48.994 0.0 0.0 4.4519 4.4519 85.502 0.0 0.0 0.0 35.014801042390786 12.641865279118782 12.641865279118782 24.13425655227236 0 0.7614393726401688 0.0 0.4247425010840047 0.0 + + {[CP]|[EA]}HPE{I|L}RSY;[EP][HA]E{I|L}RSY;{[MS]|[{M(Oxidation (M))|F}A]}{[ES]|[DT]|[{I|L}C]}E{I|L}RSY 4.4519;2.2589;1.6703 +;-;- + 96 + 1 2.079 79338.4 1.0 1291 3180 4470 DOHH2_400M_050219_2,4473 DOHH2_400M_050219_2,4473,AEHPELRSY True True AEHPELRSY 22.735418 551.270922839642 4212782.875 4470.0 nc|ENSG00000136193|Q12765-3|SCRN1;;nc|ENSG00000136193|Q12765-2|SCRN1;;ENSG00000136193|ENST00000242059|SCRN1 6.354272842407227 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4474 22.744 509.0 142470.0 25 0 9756.2 + 7126 EEMPATKGGF 10 97 541.7447856884252 1081.4750184436502 2 541.7453491091728 MULTI CID FTMS 0 0 0 4470 137448.390625 1.0 0 0.0 4 Oxidation (M) _EEM(Oxidation (M))PATKGGF_ nc|ENSG00000124789|P49790-2|NUP153;ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-3|NUP153 41.95555342248728 0.1369168616057562 2 EE{M(Oxidation (M))|F}PAT 6 4 35.155 0.0 0.0 3.2507 0.0 0.0 0.0 404.1944633048463 404.1944633048463 23.073646195705987 0.0 0.0 0.0 0 0.6549471895720984 1.2218487496163564 0.4247425010840047 0.0 + EE{M(Oxidation (M))|F}PAT 3.2507 + + 99 + 1 2.079 63661.0 1.0 1292 3180 4470 DOHH2_400M_050219_2,4474 DOHH2_400M_050219_2,4474,EEMPATKGGF False False EEMPATKGGF 22.744397 541.745349109173 787583.375 4470.0 nc|ENSG00000124789|P49790-2|NUP153;;ENSG00000124789|ENST00000262077|NUP153;;nc|ENSG00000124789|P49790-3|NUP153 7.957245826721191 2.0 True 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4475 22.75 291.0 276790.0 25 0 34531.0 + 23440 LTFFNEEKIY 10 85 435.22314775860747 1302.6476138760224 3 435.2237731814384 MULTI CID FTMS 0 0 0 4470 135564.703125 0.9011320677113508 2 -0.0931072235107421 5 Unmodified _LTFFNEEKIY_ REV__nc|ENSG00000288705|P35504-2|UGT1A5;REV__nc|ENSG00000288705|P35504|UGT1A5 5.40270961882225 0.7016457984575614 2 Y 1 -1 13.495 0.0 0.0 1.036 0.0 0.0 1121.5734694441849 0.0 1121.5734694441849 0.0 -6.395840698002999 -6.395840698002999 0.0 0 0.0 0.0 0.0 0.0 Y 1.036 + + 70 + 1 2.079 69500.9 1.0 1293 3180 4470 DOHH2_400M_050219_2,4475 DOHH2_400M_050219_2,4475,LTFFNEEKIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4476 22.764 800.0 158540.0 25 0 7808.8 -1 MFWSCIMCHCL 11 147 526.2009015908981 1575.580875372894 3 526.5355712771416 MULTI CID FTMS 0 0 0 4470 125103.7109375 1.0 0 0.0 6 3 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))FWSC(Carbamidomethyl (C))IM(Oxidation (M))C(Carbamidomethyl (C))HC(Carbamidomethyl (C))L_ ENST00000373304.3_1_X:77528630-77528690:-|nuORF 0.0948413911109767 0.8747004676205551 2 {[QN]|[E{I|L}]|[KN]}[KQ]TDQ 7 -1 19.905 0.0 0.0 1.2633 0.0 0.0 0.0 730.1334015782253 730.1334015782253 2.9149567348236545 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.6923877696554315 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}[KQ]TDQ 1.2633 - 475 1 2.079 102454.6 0.6000000238418579 1294 3180 4470 DOHH2_400M_050219_2,4476 DOHH2_400M_050219_2,4476,MFWSCIMCHCL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4478 22.768 11.0 4084600.0 25 0 404830.0 + 4787 DENGKISRL 9 70 516.2776878737973 1030.5408228143945 2 516.2778808474541 MULTI CID FTMS 0 0 0 4477 4621346.5 0.514713968686219 2 -0.0888442993164062 1 Unmodified _DENGKISRL_ ENSG00000143947|ENST00000272317|RPS27A;ENST00000591758.1_1_16:61089351-61089522:-|nuORF 30.7034409873982 0.1405282614900322 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NGK{I|L}S[R{I|L}] 9 0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} + + 43.206 3.7236 1.5257 4.1925 4.1925 52.328 0.0 0.0 0.0 0.0 38.557291669019165 0.0 0.0 0 1.024227503252014 0.0 0.0 0.4247425010840047 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NGK{I|L}S[R{I|L}] 4.1925 + + 57 + 1 2.073 45036.9 1.0 1295 3181 4477 DOHH2_400M_050219_2,4478 DOHH2_400M_050219_2,4478,DENGKISRL False True DENGKISRL 22.767999 516.277880847454 129605556.0 4477.0 ENST00000591758.1_1_16:61089351-61089522:-|nuORF;;ENSG00000143947|ENST00000272317|RPS27A 6.8451738357543945 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4479 22.77 85.0 538040.0 25 0 31475.0 + 10858 GADTLLSANHA 11 82 535.2674075957788 1068.5202622583574 2 535.2675659060478 MULTI CID FTMS 0 0 0 4477 539047.625 0.356982374724702 3 -0.1724834442138672 2 Unmodified _GADTLLSANHA_ REV__ENST00000498717.2_1_3:143566691-143567164:-|nuORF 12.240655878213236 0.7805268987462184 2 [EP]QDTR[NP]{I|L} 9 -1 + 25.033 0.0 0.0 2.3427 2.3427 76.364 0.0 0.0 0.0 6.373949984654246 4.102737437457623 4.102737437457623 9.208187539523752 0 0.0 0.0 0.4247425010840047 0.3494850021680094 [EP]QDTR[NP]{I|L};[EP][AG]DTR[NP]{I|L};[EP]Q[TP][WQ]A{I|L} 2.3427;1.481;0.61415 -;-;- 134 + 1 2.073 40479.4 1.0 1296 3181 4477 DOHH2_400M_050219_2,4479 DOHH2_400M_050219_2,4479,GADTLLSANHA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4480 22.772 80.0 722970.0 25 0 121110.0 + 35197 SSDKITTGY 9 81 486.2370131185732 970.4594733039464 2 486.2362853884697 MULTI CID FTMS 0 0 0 4477 538677.9375 0.8799014746038408 -1 0.051727294921875 3 Unmodified _SSDKITTGY_ ENSG00000136169|ENST00000611815|SETDB2;nc|ENSG00000136169|Q96T68-3|SETDB2;nc|ENSG00000136169|Q96T68|SETDB2 32.78568957990786 0.1150597335874693 2 {[CA]|SS}D[{I|L}T]KTGY 9 2 + 42.91 0.0 0.0 4.4216 4.4216 84.182 0.0 0.0 0.0 7.147642715192504 16.264100213633764 7.147642715192504 16.264100213633764 0 0.2742275032520141 0.0 0.3054621874040891 0.0 {[CA]|SS}D[{I|L}T]KTGY;{[CA]|SS}D[VP]{[QN]|[E{I|L}]|[KN]}PQ 4.4216;2.7457 -;- 104 + 1 2.073 53149.1 1.0 1297 3181 4477 DOHH2_400M_050219_2,4480 DOHH2_400M_050219_2,4480,SSDKITTGY True True SSDKITTGY 22.771726 486.23628538847 2704419.0 4477.0 nc|ENSG00000136169|Q96T68-3|SETDB2;;ENSG00000136169|ENST00000611815|SETDB2;;nc|ENSG00000136169|Q96T68|SETDB2 6.238568464914958 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4481 22.774 113.0 764360.0 25 0 179240.0 + 524 AEHPELRSY 9 89 367.8490336340788 0 367.8490478396416 PEAK CID FTMS 0 0 0 4477 377986.75 0.8176128747177275 -1 0.051727294921875 4 Unmodified _AEHPELRSY_ ENSG00000136193|ENST00000242059|SCRN1;nc|ENSG00000136193|Q12765-2|SCRN1;nc|ENSG00000136193|Q12765-3|SCRN1 31.26834338654808 0.1046433560557175 2 E{I|L}G 3 7 20.005 0.0 0.0 2.7267 0.0 0.0 67.34969373702286 364.1590365045532 431.508730241576 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 E{I|L}G 2.7267 - 32 + 1 2.073 73072.6 1.0 1298 3181 4477 DOHH2_400M_050219_2,4481 DOHH2_400M_050219_2,4481,AEHPELRSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4482 22.777 162.0 226900.0 25 0 14074.0 + -1 EMETKQMQAF 10 74 629.7757253405404 1257.5368977478806 2 629.7743408083916 MULTI CID FTMS 0 0 0 4477 298837.84375 0.0324187314175942 17 -0.6534996032714844 5 Oxidation (M) _EM(Oxidation (M))ETKQMQAF_ REV__ENSG00000137877|ENST00000320955|SPTBN5 17.11289562659939 0.5604042439455784 2 [QA]HDEAQQNA{M(Oxidation (M))|F} 11 -1 + 65.614 0.0 0.0 5.2177 5.2177 76.785 0.0 0.0 0.0 3.1420954521829003 46.159726291353714 3.1420954521829003 3.0102999566398125 0 0.7887254899964358 0.0 0.4247425010840047 0.5 [QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEAQNQA{M(Oxidation (M))|F};[HD][QA]EAQQNA{M(Oxidation (M))|F};[HD][QA]EAQNQA{M(Oxidation (M))|F};[QA]HDEAQQGGA{M(Oxidation (M))|F};[QA]HDEAQ[AG]NA{M(Oxidation (M))|F};[QA]HDEA[AG]QNA{M(Oxidation (M))|F};[QA]HDEAQN[AG]A{M(Oxidation (M))|F};[QA]HDEAQGGQA{M(Oxidation (M))|F};[QA]HDEA[AG]NQA{M(Oxidation (M))|F} 5.2177;4.9783;4.8144;4.575;4.4918;4.4918;4.4918;4.2524;4.2524;4.2524 -;-;-;-;-;-;-;-;-;- 422 1 2.073 33441.6 1.0 1299 3181 4477 DOHH2_400M_050219_2,4482 DOHH2_400M_050219_2,4482,EMETKQMQAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4483 22.782 263.0 486240.0 25 0 50635.0 -1 0 130 383.2401202618569 764.4656875905138 2 383.2397033572197 MULTI CID FTMS 0 0 0 4477 187182.59375 0.7432705879871171 -2 0.0891227722167968 6 2 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}HR 6 -1 + 61.258 0.0 0.0 8.0132 8.0132 97.003 0.0 0.0 0.0 50.02108090567568 21.682437647924218 21.682437647924218 30.696443055739653 0 0.6643943297944485 2.0 0.0 0.6989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}HR;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RH]{I|L} 8.0132;3.9978 -;- 50 + 1 2.073 102789.8 1.0 1300 3181 4477 DOHH2_400M_050219_2,4483 DOHH2_400M_050219_2,4483, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4484 22.796 800.0 123990.0 25 0 8231.5 + 5543 DMKQQHVIET 10 109 614.8017267214493 0 614.8027831912041 PEAK CID FTMS 0 0 0 4477 125705.1328125 0.7890557992321026 1 -0.0413799285888671 7 Unmodified _DMKQQHVIET_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 17.44264345198275 0.3183540907835631 2 E{I|L}VD 4 9 22.977 0.0 0.0 1.8717 0.0 0.0 119.05626140428838 649.2829073541624 768.3391687584508 0.0 0.0 0.0 0.0 0 0.5554621874040891 0.0 0.0 0.0 E{I|L}VD 1.8717 - 33 + 1 2.073 77246.6 0.6399999856948853 1301 3181 4477 DOHH2_400M_050219_2,4484 DOHH2_400M_050219_2,4484,DMKQQHVIET False True DMKQQHVIET 22.796005 614.802783191204 1627099.25 4477.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 2.36067341764768 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4485 22.805 500.0 147170.0 25 0 15299.0 + 38533 TSRTWSTSP 9 113 511.748618315098 1021.482683696996 2 511.7487670779228 MULTI CID FTMS 0 0 0 4477 88722.4765625 1.0 0 0.0 8 Unmodified _TSRTWSTSP_ REV__ENST00000496934.5_1_20:57480519-57484239:+|nuORF 28.486842064014134 0.1687311288560894 2 {[MG]|[TS]}EGG[RP]RY 9 -1 + 45.735 0.0 0.0 4.4773 4.4773 77.758 0.0 0.0 0.0 7.147642715192504 11.539134287120495 7.147642715192504 6.478174818886373 0 0.3807196863200844 0.0 0.4247425010840047 0.4247425010840047 {[MG]|[TS]}EGG[RP]RY;{[MG]|[TS]}EN[RP]RY;{[MG]|[TS]}WGP[YK]SP;{[MG]|[TS]}EGG[KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P;{[MG]|[TS]}WG[KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P;{[MG]|[TS]}EN[KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P;{[MG]|[TS]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HV]RY;{[MG]|[TS]}W[KA]{[QN]|[E{I|L}]|[KN]}{[MG]|[TS]};{[MG]|[TS]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KA]MQP;{[MG]|[TS]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[RE]|[WV]}QAA 4.4773;3.8432;3.3477;2.6219;1.9825;1.9825;1.5917;0.84105;0.81181;0.57813 -;-;-;-;-;-;-;-;-;- 250 + 1 2.073 64059.5 1.0 1302 3181 4477 DOHH2_400M_050219_2,4485 DOHH2_400M_050219_2,4485,TSRTWSTSP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4487 22.821 800.0 110930.0 25 0 6498.5 -1 STCLVCPQDTF 11 113 635.7760082791685 1269.537463625137 2 635.7764770388603 MULTI CID FTMS 0 0 0 4486 113221.0234375 0.228519287195608 5 -0.2423954010009765 1 Carbamidomethyl (C) _STC(Carbamidomethyl (C))LVCPQDTF_ ENSG00000215788|ENST00000356876|TNFRSF25;ENST00000469691.5_1_1:6522722-6525298:-|nuORF;ENST00000513135.5_1_1:6524426-6525611:-|nuORF;nc|ENSG00000215788|Q93038-10|TNFRSF25;nc|ENSG00000215788|Q93038-11|TNFRSF25;nc|ENSG00000215788|Q93038-12|TNFRSF25;nc|ENSG00000215788|Q93038-2|TNFRSF25;nc|ENSG00000215788|Q93038-3|TNFRSF25;nc|ENSG00000215788|Q93038-4|TNFRSF25;nc|ENSG00000215788|Q93038-5|TNFRSF25 15.248480904072842 0.7179608125786238 2 [AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F} 12 -1 + 77.634 0.0 0.0 6.1151 6.1151 78.301 0.0 0.0 0.0 1.638568026386693 16.611814434466183 1.638568026386693 1.638568026386693 0 0.9247425010840048 1.6989700043360187 0.5501648626366046 0.4247425010840047 [AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};[NP]HDEAQQNA{M(Oxidation (M))|F};[AG]DP[HD]AQQNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F} 6.1151;5.9861;5.9404;5.4457;5.3985;5.3985;5.3985;5.267;5.267;5.267 -;-;-;-;-;-;-;-;-;- 899 1 2.073 71846.4 0.800000011920929 1303 3182 4486 DOHH2_400M_050219_2,4487 DOHH2_400M_050219_2,4487,STCLVCPQDTF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4488 22.827 319.0 198210.0 25 0 14929.0 + 804 AESPAGHSF 9 115 451.70378265263696 901.393012372074 2 451.7037841677666 MULTI CID FTMS 0 0 0 4486 213234.703125 0.0860232725781904 7 -0.3308238983154297 2 Unmodified _AESPAGHSF_ ENSG00000136699|ENST00000680298|SMPD4;ENST00000438378.2_1_2:132275414-132277996:+|nuORF;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;nc|ENSG00000136699|Q9NXE4-10|SMPD4;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4-5|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;nc|ENSG00000136699|Q9NXE4-7|SMPD4;nc|ENSG00000136699|Q9NXE4-8|SMPD4;nc|ENSG00000136699|Q9NXE4-9|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4 52.268347100219714 0.0353964759249114 2 {[CP]|[EA]}SPQHS{M(Oxidation (M))|F} 8 2 + 47.102 0.0 0.0 5.2255 5.2255 74.587 0.0 0.0 0.0 31.14638779968488 13.711375162600705 13.711375162600705 1.3033376849500655 0 0.8252574989159953 0.0 0.8494850021680094 0.0 {[CP]|[EA]}SPQHS{M(Oxidation (M))|F};{[CP]|[EA]}SPAGHS{M(Oxidation (M))|F};{[CP]|[EA]}SP[NP][C(Carbamidomethyl (C))K];[PS][HQ]{M(Oxidation (M))|F}S{[CP]|[EA]};[PG][HA]S{M(Oxidation (M))|F}S{[CP]|[EA]};[HS][QP]{M(Oxidation (M))|F}S{[CP]|[EA]} 5.2255;5.0809;3.0391;1.5036;0.28668;0.051388 -;+;-;-;-;- + 251 + 1 2.073 54264.6 1.0 1304 3182 4486 DOHH2_400M_050219_2,4488 DOHH2_400M_050219_2,4488,AESPAGHSF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4489 22.841 800.0 257460.0 25 0 34577.0 + 43981 YIDENQDRY 9 125 608.2672074928972 1214.5198620525944 2 608.2675048708916 MULTI CID FTMS 0 0 0 4486 248226.578125 0.797436167463743 -1 0.0413799285888671 3 Unmodified _YIDENQDRY_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 72.96794272382148 0.0199516581995792 2 Y{I|L}DENQDRY 9 0 + 116.31 0.0 0.0 9.5769 9.5769 93.763 0.0 0.0 0.0 102.86594489175188 14.09256854528806 14.09256854528806 9.208187539523747 0 0.9247425010840048 2.0 0.7614393726401688 1.5629529932484498 + + Y{I|L}DENQDRY;Y{I|L}DEN[AG]DRY;Y{I|L}DEGGQDRY;Y{I|L}DEGG[AG]DRY;Y{I|L}YYC(Carbamidomethyl (C))DRY;Y{I|L}DE{[C(Carbamidomethyl (C))E]|[WC]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}K;Y[{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]}HDRY 9.5769;8.8188;8.8188;8.0642;7.0572;5.7979;2.3929 +;-;-;-;-;-;- + 1623 + 1 2.073 152385.2 0.9200000166893004 1305 3182 4486 DOHH2_400M_050219_2,4489 DOHH2_400M_050219_2,4489,YIDENQDRY True True YIDENQDRY 22.840609 608.267504870892 1658722.5 4486.0 ENSG00000133313|ENST00000324262|CNDP2;;nc|ENSG00000133313|Q96KP4-2|CNDP2;;ENST00000582620.5_1_18:72167208-72179735:+|nuORF 8.214827378590902 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4490 22.847 339.0 240740.0 25 0 52128.0 + -1 EALEVDRIM 9 97 546.2735689931358 0 546.2731201052666 PEAK CID FTMS 0 0 0 4486 164736.21875 1.0 0 0.0 4 Oxidation (M) _EALEVDRIM(Oxidation (M))_ REV__ENSG00000232810|ENST00000449264|TNF 11.640296217721598 0.2934555500198502 2 NKD 3 -1 6.4132 0.0 0.0 0.58808 0.0 0.0 494.2404230431089 236.1048983209594 730.3453213640684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 NKD 0.58808 - 43 + 1 2.073 66892.2 1.0 1306 3182 4486 DOHH2_400M_050219_2,4490 DOHH2_400M_050219_2,4490,EALEVDRIM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4491 22.852 301.0 185310.0 25 0 16987.0 + + 43808 YELDEESRRKY 11 70 496.5756856586139 1486.7052275760418 3 496.5755493044853 MULTI CID FTMS 0 0 0 4486 134925.75 0.6600909179372701 1 -0.047464370727539 5 Unmodified _YEWLMELLYDL_ ENSG00000068654|ENST00000263857|POLR1A 7.0370850670814 0.8419465095438622 2 YE{I|L}D 4 -1 60.433 0.0 0.0 4.0649 0.0 0.0 0.0 963.4636242165568 963.4636242165568 45.828956512079344 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 YE{I|L}D 4.0649 - 51 + 1 2.073 48034.3 1.0 1307 3182 4486 DOHH2_400M_050219_2,4491 DOHH2_400M_050219_2,4491,YEWLMELLYDL False False YELDEESRRKY 22.852256 496.575549304485 914651.0 4486.0 ENSG00000068654|ENST00000263857|POLR1A 2.2705208460489907 3.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4493 22.857 27.0 1889200.0 25 0 130080.0 + 7294 EEVHDLERKY 10 76 439.8861757564299 1316.6366978694898 3 439.8860046267509 MULTI CID FTMS 0 0 0 4492 1578027.875 0.1548099246320508 4 -0.1949310302734375 1 Unmodified _EEVHDLERKY_ ENSG00000187109|ENST00000618691|NAP1L1;ENSG00000205531|ENST00000380542|NAP1L4;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000205531|Q99733-2|NAP1L4 37.07464296494664 0.1884581770199685 2 EEVHD{I|L}E[RK]Y 10 0 + 58.866 0.0 0.0 4.4709 4.4709 85.45 0.0 0.0 0.0 38.38152156131065 15.713789813707209 15.713789813707209 22.70325912871688 0 0.7887254899964358 1.154901959985743 0.0 0.3054621874040891 + + EEVHD{I|L}E[RK]Y;[HV][KT]E{I|L}DHV[HC];{[TV]|[{I|L}S]}[HK]E{I|L}DHV[HC] 4.4709;2.7466;2.0218 +;-;- + 93 + 1 2.073 47804.0 1.0 1308 3183 4492 DOHH2_400M_050219_2,4493 DOHH2_400M_050219_2,4493,EEVHDLERKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4494 22.861 204.0 396210.0 25 0 39472.0 + 7296 EEVHDLERKY 10 84 659.3256261918211 1316.6366994504422 2 659.3257934451103 MULTI CID FTMS 0 0 0 4492 365550.8125 0.1609326246091432 4 -0.1949310302734375 2 Unmodified _EEVHDLERKY_ ENSG00000187109|ENST00000618691|NAP1L1;ENSG00000205531|ENST00000380542|NAP1L4;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000205531|Q99733-2|NAP1L4 73.1962812333195 0.0188336640735478 2 EEVHD{I|L}ERKY 10 0 + 81.119 0.0 0.0 6.1611 6.1611 92.486 0.0 0.0 0.0 62.53591878376909 11.517412290202673 11.517412290202673 29.16453948549925 0 2.048455006504028 1.5228787452803376 0.0 0.0 + + EEVHD{I|L}ERKY;Y{[HG]|PP}HD{I|L}E[VG]KY;[HV][KT]E{I|L}DHV[HC];EEVHD{I|L}K[HV][DP];[QA]{[SA]|[TG]}HD{I|L}E[VG]KY;[HD][{I|L}T]K{I|L}DHV[HC];[HV]{[ET]|[MV]}K{I|L}DHV[HC];EEVH{[WT]|[RM]}[{I|L}A][W{M(Oxidation (M))|F}] 6.1611;3.946;3.1294;3.0591;3.0067;2.9642;2.8305;2.0835 +;-;-;-;-;-;-;- + 180 + 1 2.073 64250.3 1.0 1309 3183 4492 DOHH2_400M_050219_2,4494 DOHH2_400M_050219_2,4494,EEVHDLERKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4495 22.863 105.0 586000.0 25 0 79405.0 + 35187 SSDANPVRY 9 89 504.74045852873513 1007.4663641242704 2 504.7403137087822 MULTI CID FTMS 0 0 0 4492 388147.21875 0.9364022499508078 2 -0.1387062072753906 3 Unmodified _SSDANPVRY_ ENSG00000112159|ENST00000369393|MDN1 65.23502041540118 0.0231836506122253 2 {[CA]|SS}DANPVRY 9 0 + 47.413 0.0 0.0 4.7062 4.7062 82.262 0.0 0.0 0.0 30.7306842758112 10.457574905606748 10.457574905606748 9.208187539523747 0 1.1549471895720984 0.0 0.0 0.0 + + {[CA]|SS}DANPVRY;{[CA]|SS}DAGGPVRY;{[CA]|SS}WNPVRY;{[CA]|SS}WGGPVRY;{[CA]|SS}WN[KT]{[SA]|[TG]}Q 4.7062;3.7922;3.6416;2.7222;1.6885 +;-;-;-;- + 135 + 1 2.073 53868.5 1.0 1310 3183 4492 DOHH2_400M_050219_2,4495 DOHH2_400M_050219_2,4495,SSDANPVRY True True SSDANPVRY 22.862981 504.740313708782 2173974.75 4492.0 ENSG00000112159|ENST00000369393|MDN1 8.136719544728598 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4496 22.866 178.0 275710.0 25 0 43249.0 + 23437 LTEVNKAGTQY 11 84 612.3170950897488 1222.6196372462975 2 612.3188354372978 MULTI CID FTMS 0 0 0 4492 325480.28125 0.1546464297613822 4 -0.1949310302734375 4 Unmodified _LTEVNKAGTQY_ ENSG00000170542|ENST00000380698|SERPINB9 51.41523569358685 0.1097924807909074 2 {I|L}TEVN{[NV]|[RG]}QE 9 4 80.455 0.0 0.0 6.5806 0.0 0.0 0.0 193.09861169986564 193.09861169986564 65.85138771613167 0.0 0.0 0.0 0 0.805462187404089 2.0 0.4247425010840047 0.805462187404089 {I|L}TEVN{[NV]|[RG]}QE 6.5806 - 612 + 1 2.073 43634.0 1.0 1311 3183 4492 DOHH2_400M_050219_2,4496 DOHH2_400M_050219_2,4496,LTEVNKAGTQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4497 22.869 98.0 514010.0 25 0 94015.0 -1 AGADHIITM 9 81 472.728958385174 943.443363837148 2 472.7289306521416 MULTI CID FTMS 0 0 0 4492 294569.59375 0.2721440717847151 3 -0.1806068420410156 5 Oxidation (M) _AGADHIITM(Oxidation (M))_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 26.88365393820708 0.1891292719743517 2 {[YC]|[HE]}{I|L}AQVT{M(Oxidation (M))|F} 8 -1 + 43.933 0.0 0.0 4.6566 4.6566 73.228 0.0 0.0 0.0 1.4220428854660838 2.0289375146764854 1.4220428854660838 2.0289375146764854 0 0.4247425010840047 0.0 0.0 0.0 {[YC]|[HE]}{I|L}AQVT{M(Oxidation (M))|F};[H{I|L}]DQA{I|L}T{M(Oxidation (M))|F};{[YC]|[HE]}A{I|L}QVT{M(Oxidation (M))|F};[H{I|L}]DQ{I|L}AT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}{I|L}NAT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}A[AG]VT{M(Oxidation (M))|F};[H{I|L}]D[AG]A{I|L}T{M(Oxidation (M))|F};{[YC]|[HE]}A{I|L}[AG]VT{M(Oxidation (M))|F};[H{I|L}]D[AG]{I|L}AT{M(Oxidation (M))|F};[PG][NP]QA{I|L}T{M(Oxidation (M))|F} 4.6566;4.4416;4.3375;4.1225;3.9022;3.6749;3.4598;3.3558;3.1407;2.5426 -;-;-;-;-;-;-;-;-;- 162 + 1 2.073 43612.9 1.0 1312 3183 4492 DOHH2_400M_050219_2,4497 DOHH2_400M_050219_2,4497,AGADHIITM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4498 22.872 182.0 345610.0 25 0 29122.0 + 10649 FVQLCPYKGQG 11 78 620.3132283273969 1238.6119037215938 2 620.3129760622978 MULTI CID FTMS 0 0 0 4492 266895.5625 0.3565019484628061 -26 1.0436649322509766 6 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 2 {[HG]|PP}AMPPPPPPQN 12 -1 {[HG]|PP}AMPP + + 55.029 24.922 4.2219 4.4428 4.4428 53.275 0.0 0.0 0.0 0.0 30.107215860603706 0.0 0.0 0 1.424742501084005 0.0 0.0 1.6791746928241125 {[HG]|PP}AMPPPPPPQN 4.4428 - 1166 + 1 2.073 54327.1 1.0 1313 3183 4492 DOHH2_400M_050219_2,4498 DOHH2_400M_050219_2,4498,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4499 22.876 196.0 328850.0 25 0 32733.0 + 5400 DLKTSREL 8 85 481.2698928678591 960.5252328025182 2 481.2696105837822 MULTI CID FTMS 0 0 0 4492 188123.65625 0.8425893908700028 -1 0.047464370727539 7 Unmodified _DLKTSREL_ ENSG00000136603|ENST00000259119|SKIL;ENST00000490894.1_1_3:170102333-170102591:+|nuORF;nc|ENSG00000136603|P12757-5|SKIL 30.63653989081413 0.3996269429323407 2 D{I|L}KT 4 4 64.557 0.0 0.0 6.7211 0.0 0.0 0.0 500.24872766666255 500.24872766666255 55.225124777856905 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.8494850021680094 0.4247425010840047 + D{I|L}KT 6.7211 + + 86 + 1 2.073 55092.6 1.0 1314 3183 4492 DOHH2_400M_050219_2,4499 DOHH2_400M_050219_2,4499,DLKTSREL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4500 22.88 238.0 218080.0 25 0 27105.0 + -1 ICHVLLGS 8 77 449.74491965013954 897.4752863670791 2 449.7440368533134 MULTI CID FTMS 0 0 0 4492 141903.046875 0.9249917806076116 -1 0.047464370727539 8 Carbamidomethyl (C) _IC(Carbamidomethyl (C))HVLLGS_ REV__ENSG00000163719|ENST00000296003|MTMR14;REV__ENST00000414996.1_1_3:9710441-9730764:+|nuORF;REV__ENST00000447144.5_1_3:9714379-9730718:+|nuORF;REV__nc|ENSG00000163719|Q8NCE2-2|MTMR14;REV__nc|ENSG00000163719|Q8NCE2-3|MTMR14 13.50788311687929 0.7113601687236069 2 {I|L}C(Carbamidomethyl (C))V{I|L}HEK 7 -1 + 46.731 0.0 0.0 5.207 5.207 85.281 0.0 0.0 0.0 16.320232147054057 9.934461232626752 9.934461232626752 9.33053210369387 0 0.5 0.0 0.3807196863200844 0.0 {I|L}C(Carbamidomethyl (C))V{I|L}HEK;{I|L}[CG]V{I|L}HEK;{I|L}C(Carbamidomethyl (C))V{I|L}K{[YC]|[HE]};{I|L}[CG]V{I|L}K{[YC]|[HE]};QQ[KT]HEK 5.207;4.1673;4.1;3.0604;0.80676 -;-;-;-;- 56 + 1 2.073 47820.9 1.0 1315 3183 4492 DOHH2_400M_050219_2,4500 DOHH2_400M_050219_2,4500,ICHVLLGS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4501 22.894 800.0 114110.0 25 0 20025.0 + 7088 EELSRDRDVY 10 100 641.3058770131363 1280.5972010930725 2 641.3062011599541 MULTI CID FTMS 0 0 0 4492 99527.5390625 1.0 0 0.0 9 Unmodified _EELSRDRDVY_ ENSG00000063978|ENST00000314289|RNF4 20.580933911654288 0.5022139299129796 2 DRH[HC] 5 8 18.491 0.0 0.0 1.4439 0.0 0.0 614.3079701154312 0.0 614.3079701154312 0.0 0.3033365308486857 0.0 0.0 0 0.75 0.0 0.0 0.0 DRH[HC] 1.4439 - 119 1 2.073 71714.0 0.5799999833106995 1316 3183 4492 DOHH2_400M_050219_2,4501 DOHH2_400M_050219_2,4501,EELSRDRDVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4502 22.897 162.0 420580.0 25 0 96659.0 2080 APPPCTWLRCR 11 67 433.8863901876376 1298.6373411631128 3 434.2202941775322 MULTI CID FTMS 0 0 0 4492 148842.703125 0.703502486277691 4 -0.1949310302734375 10 Unmodified _APPPCTWLRCR_ ENST00000599531.1_1_19:46998970-46999099:-|nuORF 1.4551175022131473 0.8682825962816412 2 P 1 10 10.485 0.0 0.0 0.80735 0.0 0.0 1183.5735574490486 0.0 1183.5735574490486 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.80735 + + 31 + 1 2.073 61388.9 1.0 1317 3183 4492 DOHH2_400M_050219_2,4502 DOHH2_400M_050219_2,4502,APPPCTWLRCR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4503 22.911 800.0 271540.0 25 0 18776.0 + 26427 NTDRPGGYSY 10 191 565.2490202487004 1128.4834875642007 2 565.2484619021416 MULTI CID FTMS 0 0 0 4492 150626.171875 0.2624665180820054 -2 0.0888442993164062 11 Unmodified _NTDRPGGYSY_ ENST00000539639.5_1_12:123707622-123714920:-|nuORF 117.83759599426816 0.0007797689957311 2 NTDRS{[WT]|[RM]}SY 9 4 + 84.536 0.0 0.0 7.4911 7.4911 89.272 0.0 0.0 0.0 7.447274948966935 7.90445948503951 7.447274948966935 7.90445948503951 0 1.7856668758921828 1.5228787452803376 1.2856668758921828 0.0 NTDRS{[WT]|[RM]}SY;{[QS]|[NT]}DR[PG]GYSY;{[QS]|[NT]}DR[NP]YSY;NTD[VG]S{[WT]|[RM]}SY;{[QS]|[NT]}DR[{M(Oxidation (M))|F}V]QSY;NTDTAA{[WT]|[RM]}SY;{[QS]|[NT]}DR{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NSY;NTDRS[YN]PY;NTDT[NP][HA]PY;[AG]SDR[PG]GYSY 7.4911;6.7906;6.7453;6.6751;6.4119;6.2812;6.2734;6.0048;5.8573;5.5785 -;+;-;-;-;-;-;-;-;- + 8051 + 1 2.073 162358.0 0.6800000071525574 1318 3183 4492 DOHH2_400M_050219_2,4503 DOHH2_400M_050219_2,4503,NTDRPGGYSY True True NTDRPGGYSY 22.911177 565.248461902142 2747777.0 4492.0 ENST00000539639.5_1_12:123707622-123714920:-|nuORF 8.532610098520914 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4504 22.916 257.0 611110.0 25 0 118840.0 + 33010 SENPGQTHF 9 112 508.7254901287191 1015.436427324238 2 508.7249633669853 MULTI CID FTMS 0 0 0 4492 151888.4375 0.1200782168727085 -4 0.1779670715332031 12 Unmodified _SENPGQTHF_ ENSG00000005812|ENST00000355619|FBXL3 78.7280429016045 0.0178249292250809 2 {[ES]|[DT]|[{I|L}C]}NPGQTH{M(Oxidation (M))|F} 9 0 + 60.153 0.0 0.0 5.9239 5.9239 82.766 0.0 0.0 0.0 5.642492736872597 6.020599913279611 5.642492736872597 6.020599913279611 0 0.9247425010840048 0.0 1.035666875892183 0.5891368308784531 + + {[ES]|[DT]|[{I|L}C]}NPGQTH{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NPGQT{M(Oxidation (M))|F}H;{[ES]|[DT]|[{I|L}C]}GGPGQTH{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NPG[AG]TH{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGPGQT{M(Oxidation (M))|F}H;{[ES]|[DT]|[{I|L}C]}NPG[AG]T{M(Oxidation (M))|F}H;{[ES]|[DT]|[{I|L}C]}GGPG[AG]TH{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}[HM]QTH{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGPG[AG]T{M(Oxidation (M))|F}H;{[ES]|[DT]|[{I|L}C]}C(Carbamidomethyl (C))[HV]TH{M(Oxidation (M))|F} 5.9239;5.331;5.0171;4.7811;4.4242;4.1882;3.5344;2.9426;2.9415;2.7951 +;-;-;-;-;-;-;-;-;- + 620 + 1 2.073 126460.9 1.0 1319 3183 4492 DOHH2_400M_050219_2,4504 DOHH2_400M_050219_2,4504,SENPGQTHF True True SENPGQTHF 22.915948 508.724963366985 6851581.5 4492.0 ENSG00000005812|ENST00000355619|FBXL3 9.229445616404217 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4505 22.931 800.0 80709.0 25 0 9750.6 -1 0 44 1118.129106561721 0 1118.128466784954 PEAK CID FTMS 0 0 0 4492 112409.328125 0.9101547859654534 -1 0.047464370727539 13 2 V 1 -1 3.9794 0.0 0.0 0.17811 0.0 0.0 1549.0628263052795 583.1039522760374 2132.166778581317 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.17811 - 1 + 1 2.073 51746.3 0.449999988079071 1320 3183 4492 DOHH2_400M_050219_2,4505 DOHH2_400M_050219_2,4505, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4506 22.936 257.0 246540.0 25 0 35170.0 + 25466 NEITGHTY 8 112 467.7167605278475 0 467.7169067263603 PEAK CID FTMS 0 0 0 4492 102464.8515625 0.976157873270298 -1 0.047464370727539 14 Unmodified _NEITGHTY_ ENSG00000170456|ENST00000389082|DENND5B;ENSG00000184014|ENST00000328194|DENND5A;ENST00000529977.5_1_11:9164913-9166651:-|nuORF;nc|ENSG00000170456|Q6ZUT9-2|DENND5B;nc|ENSG00000184014|Q6IQ26-2|DENND5A 36.04419817259434 0.1760516939127867 2 {I|L}YTT 4 6 11.692 0.0 0.0 1.2526 0.0 0.0 261.09689888597 191.0577181451781 452.1546170311482 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}YTT 1.2526 - 98 + 1 2.073 54664.4 1.0 1321 3183 4492 DOHH2_400M_050219_2,4506 DOHH2_400M_050219_2,4506,NEITGHTY False True NEITGHTY 22.935754 467.71690672636 2449590.25 4492.0 ENST00000529977.5_1_11:9164913-9166651:-|nuORF;;nc|ENSG00000170456|Q6ZUT9-2|DENND5B;;ENSG00000184014|ENST00000328194|DENND5A;;ENSG00000170456|ENST00000389082|DENND5B;;nc|ENSG00000184014|Q6IQ26-2|DENND5A 4.808295090993245 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4508 22.941 51.0 1010400.0 25 0 121090.0 + 36941 TEVTGHRW 8 70 493.2458440187874 984.4771351043748 2 493.2461730837822 MULTI CID FTMS 0 0 0 4507 829714.6875 0.2488568332216341 2 -0.0969676971435546 1 Unmodified _TEVTGHRW_ chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;ENSG00000172270|ENST00000333511|BSG;ENST00000576925.3_1_19:572634-579657:+|nuORF;nc|ENSG00000172270|P35613-2|BSG 46.020951573049366 0.1579632664462935 2 {[TV]|[{I|L}S]}E[QP]TV[DP] 9 7 + 42.039 0.0 0.0 4.2701 4.2701 68.954 0.0 0.0 0.0 0.1665380722984721 0.1665380722984721 0.1665380722984721 0.1665380722984721 0 0.5 0.8860566476931632 0.3807196863200844 0.4247425010840047 {[TV]|[{I|L}S]}E[QP]TV[DP];{[ET]|[MV]}VTGH[WR];{[TV]|[{I|L}S]}E[PA]GTV[DP];{[ET]|[MV]}V[QP]TV[DP];[DP]V[VS]GTV[DP];{[TV]|[{I|L}S]}E[PG]ATV[DP];{[ET]|[MV]}VTG[PA]V[DP];[DP]V[TA]ATV[DP];{[QN]|[E{I|L}]|[KN]}S[PA]GTV[DP];{[ET]|[MV]}V[PG]ATV[DP] 4.2701;4.2532;4.0176;3.7523;3.6894;3.6438;3.4998;3.3156;3.1912;3.126 -;+;-;-;-;-;-;-;-;- + 217 1 2.081 45042.5 1.0 1322 3184 4507 DOHH2_400M_050219_2,4508 DOHH2_400M_050219_2,4508,TEVTGHRW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4509 22.943 105.0 650170.0 25 0 66933.0 + 8508 ETDRGMSAEY 10 79 579.7401984212288 1157.4658439092575 2 579.7400390505791 MULTI CID FTMS 0 0 0 4507 515771.96875 0.1722713891955953 -3 0.1724834442138672 2 Unmodified _ETDRGMSAEY_ ENSG00000100347|ENST00000350028|SAMM50 40.23920728925047 0.1550410903091231 2 {[SA]|[TG]}E[DV]{[MG]|[TS]}SAEY 11 3 + 44.618 0.0 0.0 3.8548 3.8548 72.724 0.0 0.0 0.0 1.0862268754928903 24.480170750488064 1.0862268754928903 3.767507096020992 0 0.5 0.8538719643217619 1.642159058960253 0.0 {[SA]|[TG]}E[DV]{[MG]|[TS]}SAEY;{[CP]|[EA]}S[DV]{[MG]|[TS]}SAEY;[TA]D[DV]{[MG]|[TS]}SAEY;[YE]DD[HV]A{M(Oxidation (M))|F}Y 3.8548;3.5293;3.2251;2.7143 -;-;-;- 195 1 2.081 56781.8 1.0 1323 3184 4507 DOHH2_400M_050219_2,4509 DOHH2_400M_050219_2,4509,ETDRGMSAEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4510 22.945 94.0 878450.0 25 0 79509.0 + 29051 QEIGGPRSY 9 97 503.7510036237972 1005.4874543143944 2 503.7512084841728 MULTI CID FTMS 0 0 0 4507 504808.40625 0.4059177579930563 -4 0.2242107391357422 3 Unmodified _QEIGGPRSY_ ENSG00000102393|ENST00000218516|GLA;ENST00000466414.1_1_X:100652799-100653600:-|nuORF 57.72198328787511 0.0273433238377839 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GG[PS]RY 9 2 + 28.087 0.0 0.0 2.7934 2.7934 65.453 0.0 0.0 0.0 11.663663126853857 0.7935782190138383 0.7935782190138383 0.4575749056067586 0 0.6549471895720984 0.0 0.4247425010840047 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GG[PS]RY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GG[RP]SY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[HA]G[TP][PG];[AG]E{I|L}[HA]G[TP][PG];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GG[PA][TA]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}N[PS]RY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}N[RP]SY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GG[YR][PS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[HQ][TP][PG];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}G[QP][TA]Y 2.7934;2.7479;2.4745;2.2283;2.2279;2.1491;2.1036;2.0019;1.8249;1.7546 -;+;-;-;-;-;-;-;-;- + 298 + 1 2.081 64603.5 1.0 1324 3184 4507 DOHH2_400M_050219_2,4510 DOHH2_400M_050219_2,4510,QEIGGPRSY True True QEIGGPRSY 22.945268 503.751208484173 15266479.0 4507.0 ENSG00000102393|ENST00000218516|GLA;;ENST00000466414.1_1_X:100652799-100653600:-|nuORF 6.012422561645508 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4511 22.95 267.0 423880.0 25 0 44945.0 + 606 AEKAVTKEEF 10 122 576.3025069326269 1150.5904609320537 2 576.3013793826103 MULTI CID FTMS 0 0 0 4507 296915.53125 0.6817509423023246 -3 0.1724834442138672 4 Unmodified _AEKAVTKEEF_ ENSG00000168028|ENST00000301821|RPSA;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 57.2037768669896 0.0439211711061507 2 {[CP]|[EA]}KAVTKEE{M(Oxidation (M))|F} 10 0 + 63.58 0.0 0.0 5.5259 5.5259 57.505 0.0 0.0 0.0 6.835517441184784 0.0 0.0 0.0 0 2.6435078169319297 0.0 0.7302046884880937 0.0 + + {[CP]|[EA]}KAVTKEE{M(Oxidation (M))|F};{[CP]|[EA]}KAVTKE{M(Oxidation (M))|F}E;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AAVTKEE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AAVTWAE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AAVTWA{M(Oxidation (M))|F}E;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AAVTKE{M(Oxidation (M))|F}E;{[VA]|[{I|L}G]}SAAVTKEE{M(Oxidation (M))|F};{[VA]|[{I|L}G]}SAAVTKE{M(Oxidation (M))|F}E;[TA][VG]AVTKE{M(Oxidation (M))|F}E;[TA][VG]AVTKEE{M(Oxidation (M))|F} 5.5259;5.5259;4.9318;4.9318;4.9318;4.9318;4.5072;4.5072;4.5031;4.5031 +;-;-;-;-;-;-;-;-;- + 2039 1 2.081 89288.3 1.0 1325 3184 4507 DOHH2_400M_050219_2,4511 DOHH2_400M_050219_2,4511,AEKAVTKEEF True True AEKAVTKEEF 22.95021 576.30137938261 2321086.5 4507.0 nc|ENSG00000288920|A0A8I5KQE6|RPSA2;;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;;ENSG00000168028|ENST00000301821|RPSA 7.9159213701883955 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4512 22.954 169.0 498660.0 25 0 71732.0 + 33096 SESELGRKWDR 11 80 454.8969496006626 1361.6690194021878 3 454.8967162966728 MULTI CID FTMS 0 0 0 4507 254559.921875 1.0 0 0.0 5 Unmodified _SESELGRKWDR_ ENSG00000173436|ENST00000322753|MICOS10;ENST00000462646.5_1_1:19923518-19941047:+|nuORF;ENST00000467029.5_1_1:19923518-19943759:+|nuORF;ENST00000498067.1_1_1:19923518-19924374:+|nuORF;ENST00000498642.5_1_1:19923539-19952083:+|nuORF;ENST00000602662.1_3_1:19923518-19981524:+|nuORF;nc|ENSG00000173436|Q5TGZ0-2|MICOS10 51.487983226225225 0.1093896055713593 2 SESE{I|L}{[NV]|[RG]}[WK]DR 11 0 + 82.74 0.0 0.0 6.0763 6.0763 93.416 0.0 0.0 0.0 66.54162016654641 10.28973816737539 10.28973816737539 82.73950774943035 0 0.3807196863200844 2.0 0.5 1.274227503252014 + + SESE{I|L}{[NV]|[RG]}[WK]DR 6.0763 + + 74 + 1 2.081 72962.4 1.0 1326 3184 4507 DOHH2_400M_050219_2,4512 DOHH2_400M_050219_2,4512,SESELGRKWDR True True SESELGRKWDR 22.953529 454.896716296673 1463470.125 4507.0 ENST00000467029.5_1_1:19923518-19943759:+|nuORF;;ENSG00000173436|ENST00000322753|MICOS10;;ENST00000462646.5_1_1:19923518-19941047:+|nuORF;;ENST00000498642.5_1_1:19923539-19952083:+|nuORF;;ENST00000498067.1_1_1:19923518-19924374:+|nuORF;;ENST00000602662.1_3_1:19923518-19981524:+|nuORF;;nc|ENSG00000173436|Q5TGZ0-2|MICOS10 3.0216064055760703 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4513 22.96 364.0 281250.0 25 0 18943.0 -1 TLQCFQLY 8 127 536.7618415945216 1071.509130255843 2 536.7614013552666 MULTI CID FTMS 0 0 0 4507 195199.6875 0.735948832246072 -1 0.0836391448974609 6 Carbamidomethyl (C) _TLQC(Carbamidomethyl (C))FQLY_ ENST00000557103.5_1_14:52042403-52042616:+|nuORF 36.04419817259434 0.3004715606373109 2 VSD 3 -1 39.57 0.0 0.0 3.6929 0.0 0.0 0.0 767.3584409058082 767.3584409058082 12.786596949921218 0.0 0.0 0.0 0 0.6549471895720984 1.3979400086720375 0.0 0.0 VSD 3.6929 - 929 + 1 2.081 86073.4 1.0 1327 3184 4507 DOHH2_400M_050219_2,4513 DOHH2_400M_050219_2,4513,TLQCFQLY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4514 22.97 579.0 179480.0 25 0 9363.9 + 19249 LEKDYEEVG 9 146 541.2561436008831 1080.497734268566 2 541.2550536990166 MULTI CID FTMS 0 0 0 4507 129709.4296875 0.5974239906500961 -1 0.0836391448974609 7 Unmodified _LEKDYEEVG_ ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000530835.1_1_11:90016856-90017168:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C 36.506200033944 0.094635877243972 2 {[YD]|[{M(Oxidation (M))|F}M]}EEK{I|L}ER 8 7 + 61.314 0.0 0.0 5.6746 5.6746 76.755 0.0 0.0 0.0 11.706962271689749 9.262137858390808 9.262137858390808 1.7609125905567993 0 0.7742275032520141 1.0457574905606752 1.2302046884880935 0.0 {[YD]|[{M(Oxidation (M))|F}M]}EEK{I|L}ER;{[YD]|[{M(Oxidation (M))|F}M]}EKE{I|L}ER;{[YD]|[{M(Oxidation (M))|F}M]}EEKE{I|L}R;{[YD]|[{M(Oxidation (M))|F}M]}KEE{I|L}ER;{[YD]|[{M(Oxidation (M))|F}M]}EKEE{I|L}R;[YE]DEK{I|L}ER;{[YD]|[{M(Oxidation (M))|F}M]}EK{I|L}EER;{[YD]|[{M(Oxidation (M))|F}M]}KEEE{I|L}R;{[QD]|[EN]|[WG]|[KD]|[RS]}EYE{I|L}ER;[YE]DKE{I|L}ER 5.6746;5.5116;5.0909;5.0701;4.9279;4.5911;4.5613;4.4863;4.4799;4.4282 -;-;-;-;-;-;-;-;-;- 2402 1 2.081 90878.1 1.0 1328 3184 4507 DOHH2_400M_050219_2,4514 DOHH2_400M_050219_2,4514,LEKDYEEVG True True LEKDYEEVG 22.970233 541.255053699017 1007248.375 4507.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000127824|ENST00000248437|TUBA4A;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000167553|ENST00000301072|TUBA1C;;ENST00000530835.1_1_11:90016856-90017168:+|nuORF;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;ENSG00000167552|ENST00000301071|TUBA1A;;ENSG00000075886|ENST00000321253|TUBA3D;;ENSG00000198033|ENST00000400113|TUBA3C;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000198033|P0DPH7-2|TUBA3C;;nc|ENSG00000123416|P68363-2|TUBA1B;;nc|ENSG00000127824|P68366-2|TUBA4A 5.397524913152059 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4515 22.984 800.0 200700.0 25 0 23499.0 + 691 AENIQPGEQKY 11 138 638.8122624863861 1275.609972039572 2 638.8121215701103 MULTI CID FTMS 0 0 0 4507 123617.7578125 0.4411118778115421 -2 0.131103515625 8 Unmodified _AENIQPGEQKY_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 104.48436234954404 0.0055741972225795 2 {[CP]|[EA]}N{I|L}QY{[SA]|[TG]}VQ[PG] 12 5 + 69.101 0.0 0.0 5.4171 5.4171 73.536 0.0 0.0 0.0 4.183662915758205 1.0559672925912906 1.0559672925912906 0.2287874528033739 0 1.7302046884880935 0.0 1.305462187404089 2.048455006504028 {[CP]|[EA]}N{I|L}QY{[SA]|[TG]}VQ[PG];{[CP]|[EA]}N{I|L}QP[HS]VQ[PG];{[CP]|[EA]}N{I|L}QP{[DA]|[EG]}QKY;{[CP]|[EA]}N{I|L}QY{[SA]|[TG]}{I|L}N[PG];{[CP]|[EA]}N{I|L}QP[HS]{I|L}N[PG];{[CP]|[EA]}N{I|L}QY[{M(Oxidation (M))|F}T]KY;{[CP]|[EA]}N{I|L}[AG]Y{[SA]|[TG]}VQ[PG];{[CP]|[EA]}GG{I|L}QY{[SA]|[TG]}VQ[PG];{[CP]|[EA]}GG{I|L}QP[HS]VQ[PG];{[CP]|[EA]}N{I|L}[AG]P[HS]VQ[PG] 5.4171;5.3991;5.3343;5.3031;5.2852;5.0692;4.7038;4.7038;4.6859;4.6859 -;-;+;-;-;-;-;-;-;- + 4864 + 1 2.081 121091.6 0.6399999856948853 1329 3184 4507 DOHH2_400M_050219_2,4515 DOHH2_400M_050219_2,4515,AENIQPGEQKY True True AENIQPGEQKY 22.984087 638.81212157011 1595448.5 4507.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 7.201192696889241 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4516 22.991 373.0 308840.0 25 0 42556.0 + 26800 APPPPPPPP 9 106 433.7421379010297 865.4697228688593 2 433.7425414919853 MULTI CID FTMS 0 0 0 4507 90021.75 0.1275386003257824 23 -0.6366863250732422 9 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000150275|Q96QU1-2|PCDH15;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000204463|P46379-2|BAG6;ENSG00000005483|ENST00000311117|KMT2E;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000106299|ENST00000223023|WASL;ENSG00000142235|ENST00000600059|LMTK3;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;nc|ENSG00000127481|Q5T4S7-5|UBR4;nc|ENSG00000150275|Q96QU1-6|PCDH15;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000173273|O95271-2|TNKS;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000107758|ENST00000360663|PPP3CB;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000137710|P35241-5|RDX;ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1;nc|ENSG00000168066|Q15637-7|SF1;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;ENSG00000158195|ENST00000618852|WASF2;ENSG00000184937|ENST00000452863|WT1;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000150275|Q96QU1-4|PCDH15;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000204463|P46379|BAG6;nc|ENSG00000005483|Q8IZD2-7|KMT2E;nc|ENSG00000204463|P46379-5|BAG6;ENSG00000168066|ENST00000377390|SF1;ENSG00000165821|ENST00000537235|SALL2;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;nc|ENSG00000182095|O15417-2|TNRC18;nc|ENSG00000171634|Q12830|BPTF;ENSG00000105323|ENST00000392006|HNRNPUL1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;nc|ENSG00000133816|O94851|MICAL2;ENSG00000010017|ENST00000011619|RANBP9;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;nc|ENSG00000185090|Q5VSG8-3|MANEAL;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000150275|Q96QU1|PCDH15;ENSG00000185090|ENST00000373045|MANEAL;ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000107758|P16298-4|PPP3CB;ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000107758|P16298-3|PPP3CB;ENSG00000183307|ENST00000331437|TMEM121B;nc|ENSG00000126464|Q9ULL5-2|PRR12;nc|ENSG00000137710|P35241-2|RDX;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;ENSG00000171634|ENST00000306378|BPTF;ENSG00000204463|ENST00000676615|BAG6;ENSG00000122574|ENST00000242140|WIPF3;nc|ENSG00000107758|P16298-2|PPP3CB;ENSG00000182601|ENST00000331351|HS3ST4;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;ENSG00000184863|ENST00000401878|RBM33;ENSG00000173273|ENST00000310430|TNKS;ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000168066|Q15637-2|SF1;ENSG00000171992|ENST00000307662|SYNPO 56.04830969593885 0.0282699710924866 2 [PA]PPPP[YK] 8 3 + 39.402 0.0 0.0 4.5527 4.5527 84.612 0.0 0.0 0.0 14.18628444383237 6.989700043360188 6.989700043360188 15.898255349109505 0 1.1989700043360187 1.5228787452803376 0.0 0.0 [PA]PPPP[YK];{[HG]|PP}APPP[YK];[PA][YK]P[YK];[PA]P[YK][YK];{[HG]|PP}[YK]A[YK];{[NV]|[RG]}[{M(Oxidation (M))|F}V]P[YK];{[HG]|PP}A[YK][YK] 4.5527;2.7158;2.4791;1.9934;0.43727;0.41534;0.15645 -;-;-;-;-;-;- 62 1 2.081 94905.3 1.0 1330 3184 4507 DOHH2_400M_050219_2,4516 DOHH2_400M_050219_2,4516,PAPPPPPPP False False APPPPPPPP 22.990789 433.742541491985 26070843.0 4507.0 ENSG00000095539|ENST00000210633|SEMA4G;;nc|ENSG00000150275|Q96QU1-2|PCDH15;;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;;nc|ENSG00000184937|P19544-4|WT1;;nc|ENSG00000204463|P46379-2|BAG6;;ENSG00000005483|ENST00000311117|KMT2E;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000106299|ENST00000223023|WASL;;ENSG00000142235|ENST00000600059|LMTK3;;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000150275|Q96QU1-6|PCDH15;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000173273|O95271-2|TNKS;;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;;ENSG00000215474|ENST00000425639|SKOR2;;ENSG00000107758|ENST00000360663|PPP3CB;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;nc|ENSG00000137710|P35241-5|RDX;;ENSG00000105879|ENST00000440859|CBLL1;;nc|ENSG00000105879|Q75N03-2|CBLL1;;nc|ENSG00000168066|Q15637-7|SF1;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;nc|ENSG00000171634|Q12830-4|BPTF;;nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000126464|ENST00000418929|PRR12;;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;;ENSG00000158195|ENST00000618852|WASF2;;ENSG00000184937|ENST00000452863|WT1;;nc|ENSG00000165821|Q9Y467|SALL2;;nc|ENSG00000150275|Q96QU1-4|PCDH15;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000184937|P19544-2|WT1;;nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000005483|Q8IZD2-7|KMT2E;;nc|ENSG00000204463|P46379-5|BAG6;;ENSG00000168066|ENST00000377390|SF1;;ENSG00000165821|ENST00000537235|SALL2;;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;;nc|ENSG00000182095|O15417-2|TNRC18;;nc|ENSG00000171634|Q12830|BPTF;;ENSG00000105323|ENST00000392006|HNRNPUL1;;nc|ENSG00000184937|P19544|WT1;;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;;nc|ENSG00000133816|O94851|MICAL2;;ENSG00000010017|ENST00000011619|RANBP9;;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;;nc|ENSG00000185090|Q5VSG8-3|MANEAL;;nc|ENSG00000184937|P19544-8|WT1;;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;;nc|ENSG00000150275|Q96QU1|PCDH15;;ENSG00000185090|ENST00000373045|MANEAL;;ENSG00000137710|ENST00000645495|RDX;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000107758|P16298-4|PPP3CB;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000005483|Q8IZD2-2|KMT2E;;nc|ENSG00000107758|P16298-3|PPP3CB;;ENSG00000183307|ENST00000331437|TMEM121B;;nc|ENSG00000126464|Q9ULL5-2|PRR12;;nc|ENSG00000137710|P35241-2|RDX;;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;nc|ENSG00000095539|Q9NTN9|SEMA4G;;ENSG00000171634|ENST00000306378|BPTF;;ENSG00000204463|ENST00000676615|BAG6;;ENSG00000122574|ENST00000242140|WIPF3;;nc|ENSG00000107758|P16298-2|PPP3CB;;ENSG00000182601|ENST00000331351|HS3ST4;;nc|ENSG00000184937|P19544-3|WT1;;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;;nc|ENSG00000137710|P35241-4|RDX;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;;ENSG00000184863|ENST00000401878|RBM33;;ENSG00000173273|ENST00000310430|TNKS;;ENSG00000150275|ENST00000644397|PCDH15;;nc|ENSG00000168066|Q15637-2|SF1;;ENSG00000171992|ENST00000307662|SYNPO 1.855309327443441 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4518 23.007 769.0 206940.0 25 0 11378.0 + -1 YQYCQAYYTMQ 11 117 767.8056527034026 1533.5967524736052 2 767.8058349490166 MULTI CID FTMS 0 0 0 4517 176135.421875 0.3514230794985946 3 -0.1048564910888671 1 Carbamidomethyl (C),Oxidation (M) _YQYC(Carbamidomethyl (C))QAYYTM(Oxidation (M))Q_ REV__ENSG00000097033|ENST00000370558|SH3GLB1;REV__nc|ENSG00000097033|Q9Y371-2|SH3GLB1;REV__nc|ENSG00000097033|Q9Y371-3|SH3GLB1 4.897010918128616 0.8520435188433833 2 [YE]A[H{I|L}]{I|L}TAE 9 -1 57.998 0.0 0.0 3.7818 0.0 0.0 0.0 503.0911826643584 503.0911826643584 23.74078013322924 0.0 0.0 0.0 0 0.0 2.0 2.0585456211725206 0.0 [YE]A[H{I|L}]{I|L}TAE 3.7818 - 3136 1 2.081 115335.2 1.0 1331 3185 4517 DOHH2_400M_050219_2,4518 DOHH2_400M_050219_2,4518,YQYCQAYYTMQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4519 23.009 133.0 849740.0 25 0 79415.0 + 14996 ILRSQKPVM 9 123 357.8836047422948 1070.6289848270844 3 357.8825561404228 MULTI CID FTMS 0 0 0 4517 235729.328125 1.0 0 0.0 2 Unmodified _ILRSQKPVM_ ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF 9.38312468134398 0.5871240394367778 2 {I|L}[{M(Oxidation (M))|F}T]PP{I|L}E[RV] 9 7 + 28.662 0.0 0.0 2.6771 2.6771 67.938 0.0 0.0 0.0 2.7815125038364386 3.740531936587464 2.7815125038364386 2.374694260092188 0 0.0 0.0 0.0 0.0 {I|L}[{M(Oxidation (M))|F}T]PP{I|L}E[RV];{I|L}[MT]{I|L}P{I|L}E[RV];{I|L}[{M(Oxidation (M))|F}V]VP{I|L}E[RV];[YV]VPP{I|L}E[RV];{I|L}[{M(Oxidation (M))|F}V]PV{I|L}E[RV];[YV]PVP{I|L}E[RV];{I|L}[{M(Oxidation (M))|F}T]PK[NP][RV];{I|L}[{M(Oxidation (M))|F}V]P{I|L}VE[RV];{I|L}[{M(Oxidation (M))|F}T]PPV{[RE]|[WV]}{I|L};{I|L}[MT]{I|L}K[NP][RV] 2.6771;2.4553;2.396;2.396;2.1148;2.1148;2.0707;1.9492;1.8534;1.8489 -;-;-;-;-;-;-;-;-;- 364 + 1 2.081 97261.2 1.0 1332 3185 4517 DOHH2_400M_050219_2,4519 DOHH2_400M_050219_2,4519,ILRSQKPVM False True ILRSQKPVM 23.009337 357.882556140423 1354401.0 4517.0 ENSG00000108107|ENST00000344063|RPL28;;ENST00000560583.5_1_19:55899571-55899697:+|nuORF;;ENST00000412461.2_1_22:19043875-19044022:+|nuORF -0.2209591468175252 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4520 23.017 433.0 450930.0 25 0 51629.0 8504 ETDRGMSAEY 10 157 587.7382827713136 1173.4620126094271 2 587.7378417849541 MULTI CID FTMS 0 0 0 4517 188529.484375 0.620487819277039 -3 0.1861705780029297 3 Oxidation (M) _ETDRGM(Oxidation (M))SAEY_ ENSG00000100347|ENST00000350028|SAMM50 41.95555342248728 0.1369168616057562 2 [DP]E[QA]{M(Oxidation (M))|F}SA{M(Oxidation (M))|F}Y 10 6 + 38.998 0.0 0.0 3.3233 3.3233 72.351 0.0 0.0 0.0 3.6258900135439935 14.176900905975875 3.6258900135439935 4.978082657522492 0 0.0 1.2218487496163564 1.2376954943324543 0.0 [DP]E[QA]{M(Oxidation (M))|F}SA{M(Oxidation (M))|F}Y;[YE]{[{M(Oxidation (M))|F}H]|[RQ]}ESAEY;[DP]WWCSA{M(Oxidation (M))|F}Y;[DP]E[QA][HD]AEY;{[ET]|[MV]}GSVCESAEY;{[SA]|[TG]}V{[ES]|[DT]|[{I|L}C]}CESAEY;{[ET]|[MV]}Q{M(Oxidation (M))|F}AESAEY;{[DS]|[MA]|[CV]|TT}[RD]CESAEY;{[SA]|[TG]}ESVWDA{M(Oxidation (M))|F}Y;[{M(Oxidation (M))|F}V]Y{[YD]|[{M(Oxidation (M))|F}M]}SA{M(Oxidation (M))|F}Y 3.3233;2.8991;2.7277;2.5982;2.5144;2.4873;2.4438;2.3437;2.2721;2.2638 -;-;-;-;-;-;-;-;-;- 4970 1 2.081 145334.6 1.0 1333 3185 4517 DOHH2_400M_050219_2,4520 DOHH2_400M_050219_2,4520,ETDRGMSAEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4521 23.019 86.0 1250100.0 25 0 496620.0 + -1 ELPDKHSL 8 73 470.2567787453285 469.2495022787285 1 470.2558471560478 MULTI CID FTMS 0 0 0 4517 749018.6875 0.3181752942835648 4 -0.1446533203125 4 ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENSG00000146223|ENST00000493763|RPL7L1;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;ENST00000469911.1_1_3:182328694-182329198:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 2 {[QN]|[E{I|L}]|[KN]}P 3 -1 23.671 0.0 0.0 5.0444 0.0 0.0 0.0 127.0522569498772 127.0522569498772 12.433787369250169 0.0 0.0 0.0 0 0.0 2.0 0.25 0.0 {[QN]|[E{I|L}]|[KN]}P 5.0444 - 23 1 2.081 90835.0 1.0 1334 3185 4517 DOHH2_400M_050219_2,4521 DOHH2_400M_050219_2,4521, False False ELPDKHSL 23.018964 470.255847156048 4363215.0 4517.0 ENST00000397415.7_1_6:42848808-42854199:+|nuORF;;ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;;ENST00000469911.1_1_3:182328694-182329198:+|nuORF;;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 6.28493865331014 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4522 23.033 800.0 101200.0 25 0 26584.0 -1 0 60 1154.1555451526704 3459.444806058212 3 1154.489794909954 MULTI CID FTMS 0 0 0 4517 128776.171875 0.6227158189806612 -3 0.1861705780029297 5 2 GT 2 -1 8.5835 0.0 0.0 0.24812 0.0 0.0 2147.750285630267 1150.5623262994752 3298.312611929742 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GT 0.24812 - 11 + 1 2.081 72967.1 0.4799999892711639 1335 3185 4517 DOHH2_400M_050219_2,4522 DOHH2_400M_050219_2,4522, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4524 23.039 196.0 339690.0 25 0 63902.0 + 4788 DENGKISRL 9 92 516.2776878737973 1030.5408228143945 2 516.2777587771416 MULTI CID FTMS 0 0 0 4523 100157.484375 0.0111552891081169 7 -0.2611560821533203 1 Unmodified _DENGKISRL_ ENSG00000143947|ENST00000272317|RPS27A;ENST00000591758.1_1_16:61089351-61089522:-|nuORF 33.4449034751529 0.1114409586740657 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NGK{I|L}SR{I|L} 9 0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} + + 39.294 3.7236 1.5256 3.813 3.813 51.121 0.0 0.0 0.0 0.0 21.33523728866662 0.0 0.0 0 0.8494850021680094 0.0 0.2887254899964357 0.4247425010840047 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NGK{I|L}SR{I|L} 3.813 + + 53 + 1 2.081 57492.8 1.0 1336 3186 4523 DOHH2_400M_050219_2,4524 DOHH2_400M_050219_2,4524,DENGKISRL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4525 23.047 461.0 147900.0 25 0 9488.6 + -1 RDMEGEMVQF 10 117 629.2661135305258 0 629.2649413943291 PEAK CID FTMS 0 0 0 4523 158056.40625 0.4869030262218651 3 -0.102752685546875 2 Oxidation (M) _RDMEGEM(Oxidation (M))VQF_ REV__L1MC2_dup2711|chr7:150757173-150757849:+|1.24189453363513|0.3250125768807995|1.93|48.0|16|2|sense 13.042465956692816 0.351733747982019 2 QQWPPND 7 -1 22.467 0.0 0.0 1.7881 0.0 0.0 263.06987246945147 125.07251917056875 388.1423916400202 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6307196863200843 0.0 QQWPPND 1.7881 - 592 + 1 2.081 55345.2 1.0 1337 3186 4523 DOHH2_400M_050219_2,4525 DOHH2_400M_050219_2,4525,RDMEGEMVQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4527 23.052 45.0 1297600.0 25 0 157090.0 + 337 AEALPKQSV 9 61 471.76771174447646 941.5208705557528 2 471.7664062380791 MULTI CID FTMS 0 0 0 4526 946322.9375 0.3705392374234384 -2 0.0562248229980468 1 Unmodified _AEALPKQSV_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 49.55428908609986 0.0413471690215031 2 {[CP]|[EA]}A{I|L}PKQSV 9 0 + 53.515 0.0 0.0 5.6839 5.6839 88.056 0.0 0.0 0.0 31.402150411921777 18.95796166923517 18.95796166923517 11.95046257204389 0 1.0 0.0 0.7742275032520141 0.2742275032520141 + + {[CP]|[EA]}A{I|L}PKQSV;{[CP]|[EA]}A{I|L}PK[AG]SV 5.6839;4.4146 +;- + 143 + 1 2.081 50565.8 1.0 1338 3187 4526 DOHH2_400M_050219_2,4527 DOHH2_400M_050219_2,4527,AEALPKQSV True True AEALPKQSV 23.051774 471.766406238079 23666372.0 4526.0 nc|ENSG00000145741|P20290-2|BTF3;;ENSG00000145741|ENST00000380591|BTF3 7.414372285207112 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4528 23.054 127.0 755030.0 25 0 106670.0 + 6524 EALAKAGG 8 109 358.7005628572861 715.3865727813723 2 358.7003356814384 MULTI CID FTMS 0 0 0 4526 337434.3125 0.3769839324704306 -3 0.1112918853759765 2 Unmodified _EALAKAGG_ REV__ENSG00000167984|ENST00000359128|NLRC3;REV__nc|ENSG00000167984|Q7RTR2-2|NLRC3;REV__nc|ENSG00000167984|Q7RTR2-4|NLRC3 18.13498045792455 0.6430038125133779 2 EA{I|L}ERV 6 -1 + 67.936 0.0 0.0 9.4964 9.4964 84.538 0.0 0.0 0.0 31.42667503568732 1.8364439694612715 1.8364439694612715 1.8364439694612715 0 0.2614393726401688 1.5228787452803376 0.6421590589602533 0.2302046884880938 EA{I|L}ERV;EA{I|L}EVR;EA{I|L}VER;EAV{I|L}ER;EA{I|L}VWV;EA{I|L}[RD]{I|L};EAV{I|L}WV;EAV{[RE]|[WV]}{I|L};E[KT][KG][PG] 9.4964;9.2397;8.7056;7.6732;7.61;7.0419;6.9431;6.0095;0.41219 -;-;-;-;-;-;-;-;- 130 + 1 2.081 80772.4 1.0 1339 3187 4526 DOHH2_400M_050219_2,4528 DOHH2_400M_050219_2,4528,EALAKAGG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4529 23.057 107.0 808610.0 25 0 54525.0 + 8524 ETEKDFSRY 9 94 587.7729035274481 1173.531254121696 2 587.7725707888603 MULTI CID FTMS 0 0 0 4526 345881.90625 0.36100569847924 -2 0.0562248229980468 3 Unmodified _ETEKDFSRY_ ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF 51.41523569358685 0.0372669606867193 2 ETEKD{M(Oxidation (M))|F}SRY 9 0 + 78.815 0.0 0.0 6.7161 6.7161 93.663 0.0 0.0 0.0 59.64632226744975 16.478174818886373 16.478174818886373 22.21848749616356 0 0.805462187404089 1.2218487496163564 0.5 0.0 + + ETEKD{M(Oxidation (M))|F}SRY;ETWW{M(Oxidation (M))|F}SRY;ET[TA]{[CP]|[EA]}{M(Oxidation (M))|F}SRY;ETEKD{M(Oxidation (M))|F}[TP][HA];[QA]C(Carbamidomethyl (C))KD{M(Oxidation (M))|F}SRY;[QA][CG]KD{M(Oxidation (M))|F}SRY;E[KA][C(Carbamidomethyl (C))N]{M(Oxidation (M))|F}SRY;E[KA]{[CT]|[{M(Oxidation (M))|F}G]}GC(Carbamidomethyl (C))SRY;[QA]C(Carbamidomethyl (C))K[WY]RY;E[KA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}C(Carbamidomethyl (C))SRY 6.7161;4.8228;3.9945;3.8779;3.5647;2.78;2.4125;2.2234;2.1844;2.0734 +;-;-;-;-;-;-;-;-;- + 412 + 1 2.081 69735.6 1.0 1340 3187 4526 DOHH2_400M_050219_2,4529 DOHH2_400M_050219_2,4529,ETEKDFSRY True True ETEKDFSRY 23.056659 587.77257078886 10134595.5 4526.0 ENSG00000021776|ENST00000156471|AQR;;ENST00000543879.6_1_15:35166876-35196659:-|nuORF 6.754836082458496 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4530 23.06 170.0 502710.0 25 0 44930.0 + 424 AEELERQGY 9 84 547.7598426739326 1093.505132414665 2 547.7595092654228 MULTI CID FTMS 0 0 0 4526 343455.96875 0.5733260795921602 -2 0.0562248229980468 4 Unmodified _AEELERQGY_ ENSG00000109111|ENST00000314616|SUPT6H 79.59630418116434 0.0176145593575188 2 E{I|L}E 3 6 31.995 0.0 0.0 2.9259 0.0 0.0 200.07974994910813 519.232417109563 719.3121670586711 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 + E{I|L}E 2.9259 + + 345 + 1 2.081 68388.6 1.0 1341 3187 4526 DOHH2_400M_050219_2,4530 DOHH2_400M_050219_2,4530,AEELERQGY True True AEELERQGY 23.059991 547.759509265423 5707094.0 4526.0 ENSG00000109111|ENST00000314616|SUPT6H 6.247189839680989 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4531 23.064 185.0 549350.0 25 0 27836.0 + 32869 SEIDKRVQY 9 129 379.8684326263442 1136.5834684792326 3 379.8677551150322 MULTI CID FTMS 0 0 0 4526 278481.3125 0.5337579325602628 -2 0.0562248229980468 5 Unmodified _SEIDKRVQY_ ENSG00000163510|ENST00000410053|CWC22 58.6788170122104 0.0268135626297836 2 SE{I|L}DK 5 4 72.039 0.0 0.0 6.3382 0.0 0.0 0.0 561.2797335260374 561.2797335260374 46.18263424462959 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.5 1.274227503252014 + SE{I|L}DK 6.3382 + + 584 + 1 2.081 84788.9 1.0 1342 3187 4526 DOHH2_400M_050219_2,4531 DOHH2_400M_050219_2,4531,SEIDKRVQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4532 23.066 115.0 537220.0 25 0 38755.0 + 784 AESKEIVRGY 10 89 384.5395592240664 1150.5968482723993 3 384.5395690798759 MULTI CID FTMS 0 0 0 4526 229912.15625 1.0 0 0.0 6 Unmodified _AESKEIVRGY_ ENSG00000054148|ENST00000247665|PHPT1;ENST00000492540.5_1_9:139743852-139744679:+|nuORF;nc|ENSG00000054148|Q9NRX4-2|PHPT1 17.86316937532769 0.5478153791579383 2 E{I|L}K 3 8 16.555 0.0 0.0 1.4388 0.0 0.0 415.204810010519 362.1426180475219 777.3474280580409 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E{I|L}K 1.4388 - 83 + 1 2.081 56433.0 1.0 1343 3187 4526 DOHH2_400M_050219_2,4532 DOHH2_400M_050219_2,4532,AESKEIVRGY False True AESKEIVRGY 23.06598 384.539569079876 1136764.5 4526.0 ENST00000492540.5_1_9:139743852-139744679:+|nuORF;;ENSG00000054148|ENST00000247665|PHPT1;;nc|ENSG00000054148|Q9NRX4-2|PHPT1 3.769799073537191 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4533 23.072 324.0 434170.0 25 0 47647.0 + 32870 SEIDKRVQY 9 108 569.2984503285909 1136.5823477239817 2 569.2986938357353 MULTI CID FTMS 0 0 0 4526 301690.59375 0.5604120815107356 -2 0.0562248229980468 7 Unmodified _SEIDKRVQY_ ENSG00000163510|ENST00000410053|CWC22 86.33184430468982 0.0159826143231117 2 SE{I|L}DKRVQY 9 0 + 93.515 0.0 0.0 8.2278 8.2278 95.136 0.0 0.0 0.0 61.96063146421345 12.587418566968154 12.587418566968154 14.208187539523747 0 1.9731975075880328 1.6989700043360187 0.4247425010840047 1.3494850021680094 + + SE{I|L}DKRVQY;SE{I|L}DKRV[AG]Y;{[ES]|[DT]|[{I|L}C]}{I|L}DKRVQY;{[ES]|[DT]|[{I|L}C]}{I|L}DKR[R{M(Oxidation (M))|F}]S;{[ET]|[MV]}VDKRVQY;{NN|[MP]|[D{I|L}]|[EV]}TDKRVQY;{[QV]|[N{I|L}]|[RA]|[KV]}[RK]D{I|L}{[ES]|[DT]|[{I|L}C]}Y;{[ET]|[MV]}VDKR[R{M(Oxidation (M))|F}]S;[YE][K{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}[RK]D{I|L}[YE]S 8.2278;6.9777;3.0396;2.712;1.6811;1.5448;1.4437;1.3535;1.3496;1.3299 +;-;+;-;-;-;-;-;-;- + 228 + 1 2.081 110050.1 1.0 1344 3187 4526 DOHH2_400M_050219_2,4533 DOHH2_400M_050219_2,4533,SEIDKRVQY True True SEIDKRVQY 23.071882 569.298693835735 4470109.5 4526.0 ENSG00000163510|ENST00000410053|CWC22 6.260610580444336 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4534 23.082 580.0 354190.0 25 0 33248.0 + 6639 EAVIKHSL 8 144 448.7634939033163 895.5124348734327 2 448.7635070681572 MULTI CID FTMS 0 0 0 4526 144423.40625 0.3740263601822306 -2 0.0562248229980468 8 Unmodified _EAVIKHSL_ ENSG00000080608|ENST00000397885|PUM3 96.28474662873226 0.07713372045102 2 {I|L}GE{I|L}KHS{I|L} 8 3 + 59.701 0.0 0.0 6.6666 6.6666 83.061 0.0 0.0 0.0 32.88593341910011 9.23304418861732 9.23304418861732 3.7484941235770393 0 0.9985619177777272 0.6020599913279624 1.839136830878453 0.0 {I|L}GE{I|L}KHS{I|L};{[CP]|[EA]}V{I|L}KHS{I|L};{I|L}GE{I|L}K{I|L}[HS];{[CP]|[EA]}V{I|L}K{I|L}[HS];{I|L}SAV{[VA]|[{I|L}G]}HS{I|L};{[TV]|[{I|L}S]}HK{I|L}{[DA]|[EG]}{I|L};{[TV]|[{I|L}S]}HKV{[CP]|[EA]}{I|L};{I|L}W{I|L}[{I|L}A]SPP;[HS]{I|L}K{I|L}{[DA]|[EG]}{I|L};[HS]{I|L}KV{[CP]|[EA]}{I|L} 6.6666;6.2481;4.7838;4.3652;4.0629;3.365;3.2839;2.6046;2.4267;2.3455 -;+;-;-;-;-;-;-;-;- + 753 + 1 2.081 162800.4 1.0 1345 3187 4526 DOHH2_400M_050219_2,4534 DOHH2_400M_050219_2,4534,EAVIKHSL True True EAVIKHSL 23.082039 448.763507068157 1751216.625 4526.0 ENSG00000080608|ENST00000397885|PUM3 4.968419233957927 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4535 23.096 800.0 117160.0 25 0 3955.8 -1 0 91 725.659684013887 2173.957222641861 3 725.9946777224541 MULTI CID FTMS 0 0 0 4526 116403.9296875 1.0 0 0.0 9 2 TVGGD 5 -1 59.508 0.0 0.0 2.7373 0.0 0.0 1726.7600488498604 0.0 1726.7600488498604 0.0 24.089934634871284 0.0 0.0 0 1.424742501084005 0.0 0.7302046884880937 0.0 TVGGD 2.7373 - 64 1 2.081 77067.8 0.6100000143051147 1346 3187 4526 DOHH2_400M_050219_2,4535 DOHH2_400M_050219_2,4535, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4537 23.102 169.0 415020.0 25 0 80955.0 + 4720 DEDAYKKQF 9 100 572.2694876016908 0 572.2686645388603 PEAK CID FTMS 0 0 0 4536 176299.765625 0.8015244698574059 -2 0.0629558563232421 1 Unmodified _DEDAYKKQF_ ENSG00000122406|ENST00000370321|RPL5;ENST00000434805.1_1_1:35816564-35817152:+|nuORF;ENST00000480199.1_1_8:28157565-28157883:+|nuORF 38.17557092003332 0.0706864996250298 2 DA 2 7 23.826 0.0 0.0 2.0854 0.0 0.0 244.0699024884781 709.366560291919 953.436462780397 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.25 0.0 + DA 2.0854 + + 86 1 2.081 57657.2 1.0 1347 3188 4536 DOHH2_400M_050219_2,4537 DOHH2_400M_050219_2,4537,DEDAYKKQF True True DEDAYKKQF 23.102315 572.26866453886 1114997.75 4536.0 ENST00000480199.1_1_8:28157565-28157883:+|nuORF;;ENST00000434805.1_1_1:35816564-35817152:+|nuORF;;ENSG00000122406|ENST00000370321|RPL5 5.237383921941121 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4538 23.116 800.0 139380.0 25 0 6775.6 31388 RNWVKIHFNR 10 46 685.3838835460961 0 685.3838378787041 PEAK CID FTMS 0 0 0 4536 38253.6953125 0.448747057214855 1 -0.0397968292236328 2 Unmodified _RNWVKIHFNR_ ENSG00000204186|ENST00000374423|ZDBF2 0.4007161486938917 0.3961065659209837 2 S 1 10 0.48455 0.0 0.0 0.035401 0.0 0.0 705.7715379888733 572.9214571588499 1278.6929951477232 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.035401 - 1 + 1 2.081 86473.4 0.5400000214576721 1348 3188 4536 DOHH2_400M_050219_2,4538 DOHH2_400M_050219_2,4538,RNWVKIHFNR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4539 23.117 35.0 2500100.0 25 0 419020.0 + 15690 IQRLETMK 8 73 509.7892604296919 1017.563967926184 2 509.7894164919853 MULTI CID FTMS 0 0 0 4536 1583917.0 0.4911700654609887 -2 0.0629558563232421 3 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 29.081581746732265 0.4323690340403521 2 TMK 3 -1 47.945 0.0 0.0 4.7118 0.0 0.0 639.3701690430206 0.0 639.3701690430206 0.0 24.75772496747986 0.0 0.0 0 1.5 0.0 0.3252574989159953 0.3494850021680094 TMK 4.7118 + + 141 + 1 2.081 75900.6 1.0 1349 3188 4536 DOHH2_400M_050219_2,4539 DOHH2_400M_050219_2,4539,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4540 23.119 50.0 1838100.0 25 0 145480.0 + 8525 ETEKDFSRY 9 99 392.1843026748667 1173.5310786248 3 392.1836425662041 MULTI CID FTMS 0 0 0 4536 958416.625 0.879595722461802 -1 0.0486316680908203 4 Unmodified _ETEKDFSRY_ ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF 21.53697664764585 0.2571576504437394 2 KD{M(Oxidation (M))|F}SRY 6 3 35.636 0.0 0.0 3.0367 0.0 0.0 359.1315634598313 0.0 359.1315634598313 0.0 24.20941280735775 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3252574989159953 + KD{M(Oxidation (M))|F}SRY 3.0367 + + 212 + 1 2.081 78241.7 1.0 1350 3188 4536 DOHH2_400M_050219_2,4540 DOHH2_400M_050219_2,4540,ETEKDFSRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4541 23.122 164.0 643370.0 25 0 91988.0 + 42373 VTDKSMVDKY 10 121 395.8654799217338 0 395.8653442263603 PEAK CID FTMS 0 0 0 4536 296930.71875 0.4081473167975056 -2 0.0629558563232421 5 Unmodified _VTDKSMVDKY_ ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS 48.07275321834293 0.0595103699479625 2 VMSTD 5 7 19.387 0.0 0.0 2.4549 0.0 0.0 128.4056291776489 125.07251917056875 253.47814834821764 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4005149978319906 0.0 VMSTD 2.4549 - 167 + 1 2.081 93124.9 1.0 1351 3188 4536 DOHH2_400M_050219_2,4541 DOHH2_400M_050219_2,4541,VTDKSMVDKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4542 23.136 800.0 234340.0 25 0 20468.0 + 42374 VTDKSMVDKY 10 164 593.2950678491279 0 593.2948486208916 PEAK CID FTMS 0 0 0 4536 136511.640625 0.493655463519113 -2 0.0629558563232421 6 Unmodified _VTDKSMVDKY_ ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS 106.36510571406706 8.34292242003596e-05 2 TDKSMVDK 8 2 69.401 0.0 0.0 5.8588 0.0 0.0 99.06891157753223 178.0515078180297 277.12041939556195 0.0 0.0 0.0 0.0 0 2.668826521534556 0.0 1.3737125054200234 0.2396518287104437 + TDKSMVDK 5.8588 + + 1911 + 1 2.081 139884.0 0.6499999761581421 1352 3188 4536 DOHH2_400M_050219_2,4542 DOHH2_400M_050219_2,4542,VTDKSMVDKY True True VTDKSMVDKY 23.135688 593.294848620892 4356490.5 4536.0 ENSG00000136813|ENST00000684092|ECPAS;;nc|ENSG00000136813|Q5VYK3|ECPAS 7.400840759277344 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4544 23.141 128.0 614340.0 25 0 41946.0 + -1 SNVGPCKKMFL 11 89 620.3132283273969 1238.6119037215938 2 620.3140136599541 MULTI CID FTMS 0 0 0 4543 366323.8125 0.4893118180808031 -20 0.8676300048828125 1 Oxidation (M) _SNVGPCKKM(Oxidation (M))FL_ REV__ENSG00000111199|ENST00000261740|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-2|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-3|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-4|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-5|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-6|TRPV4 15.248480904072842 0.7179608125786238 2 {[HG]|PP}AMPPPPP[QP]N 12 -1 {[HG]|PP}AM + + 65.488 11.427 2.8842 5.2872 5.2872 56.584 0.0 0.0 0.0 0.0 47.56334623906618 0.0 0.0 0 2.774227503252014 0.0 0.0 1.3411290632962718 {[HG]|PP}AMPPPPP[QP]N 5.2872 - 2050 + 1 2.081 64920.3 1.0 1353 3189 4543 DOHH2_400M_050219_2,4544 DOHH2_400M_050219_2,4544,SNVGPCKKMFL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4545 23.147 376.0 249380.0 25 0 38180.0 + 38502 TSKDKTIL 8 116 453.2692304216863 904.5239079101726 2 453.2691223025322 MULTI CID FTMS 0 0 0 4543 126557.1953125 1.0 0 0.0 2 Unmodified _TSKDKTIL_ chr12:25052956-25063720|41|17.37|0.82|4.41|+|ENST00000547044|IRAG2,IRAG2;ENSG00000118308|ENST00000556887|IRAG2;nc|ENSG00000118308|Q12912|IRAG2 34.93206674587334 0.3190774572298582 2 TSK 3 5 40.336 0.0 0.0 4.4594 0.0 0.0 0.0 585.3254488580686 585.3254488580686 11.593793813122062 0.0 0.0 0.0 0 0.555462187404089 1.3979400086720375 0.0 0.0 + TSK 4.4594 + + 412 + 1 2.081 77983.7 1.0 1354 3189 4543 DOHH2_400M_050219_2,4545 DOHH2_400M_050219_2,4545,TSKDKTIL False True TSKDKTIL 23.147351 453.269122302532 804696.8125 4543.0 nc|ENSG00000118308|Q12912|IRAG2;;ENSG00000118308|ENST00000556887|IRAG2;;chr12:25052956-25063720|41|17.37|0.82|4.41|+|ENST00000547044|IRAG2,IRAG2 -0.074702759583791 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4546 23.161 800.0 165680.0 25 0 44753.0 + 30568 REQWAAQPF 9 108 566.7782376122863 1131.5419222913724 2 566.7781860232353 MULTI CID FTMS 0 0 0 4543 160897.203125 1.0 0 0.0 3 Unmodified _REQWAAQPF_ REV__ENSG00000154263|ENST00000690296|ABCA10;REV__ENST00000451020.6_1_4:419554-419923:-|nuORF;REV__ENST00000518929.5_1_17:67144970-67149609:-|nuORF;REV__ENST00000519732.5_1_17:67144970-67171813:-|nuORF;REV__ENST00000522406.5_1_17:67144970-67178294:-|nuORF;REV__nc|ENSG00000154263|Q8WWZ4-2|ABCA10 13.042465956692816 0.4836390050082244 2 [VG]E 3 -1 29.666 0.0 0.0 2.6217 0.0 0.0 0.0 843.3734835260374 843.3734835260374 8.049537427956103 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 [VG]E 2.6217 - 78 + 1 2.081 104908.8 0.6899999976158142 1355 3189 4543 DOHH2_400M_050219_2,4546 DOHH2_400M_050219_2,4546,REQWAAQPF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4547 23.175 800.0 334410.0 25 0 29477.0 + 6323 DVIQKNKL 8 181 479.2904655206761 956.5663781081522 2 479.2896911501884 MULTI CID FTMS 0 0 0 4543 154946.890625 0.5265372272072206 -2 0.0884284973144531 4 Unmodified _DVIQKNKL_ ENSG00000020426|ENST00000261245|MNAT1;ENST00000556764.5_1_14:61201502-61275155:+|nuORF;nc|ENSG00000020426|P51948-2|MNAT1 61.357469665136826 0.1155423183535659 2 DV{I|L}QKNK{I|L} 8 0 + 77.083 0.0 0.0 8.0583 8.0583 93.285 0.0 0.0 0.0 53.92281585743653 10.688812894078126 10.688812894078126 9.262137858390815 0 1.055462187404089 2.0 0.0 0.8494850021680094 + + DV{I|L}QKNK{I|L};DV{I|L}QKGGK{I|L};DV{I|L}[AG]KNK{I|L};DV{I|L}[AG]KGGK{I|L};{I|L}VDQKNK{I|L};{I|L}VDQKGGK{I|L};{I|L}VD[AG]KNK{I|L};{I|L}[MT]{I|L}RRAP 8.0583;7.09;7.09;6.1274;5.0331;4.0648;4.0648;1.2767 +;-;-;-;-;-;-;- + 609 + 1 2.081 201660.3 0.6100000143051147 1356 3189 4543 DOHH2_400M_050219_2,4547 DOHH2_400M_050219_2,4547,DVIQKNKL True True DVIQKNKL 23.174994 479.289691150188 1450654.125 4543.0 nc|ENSG00000020426|P51948-2|MNAT1;;ENST00000556764.5_1_14:61201502-61275155:+|nuORF;;ENSG00000020426|ENST00000261245|MNAT1 4.547306378682454 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4548 23.189 800.0 144910.0 25 0 6811.7 + 6210 DTKKTYCFDAF 11 146 669.8079376218856 1337.601322310571 2 669.8096191287041 MULTI CID FTMS 0 0 0 4543 97123.7890625 1.0 0 0.0 5 Unmodified _DTKKTYCFDAF_ ENSG00000107362|ENST00000333421|ABHD17B;ENSG00000129968|ENST00000292577|ABHD17A;nc|ENSG00000107362|Q5VST6-2|ABHD17B;nc|ENSG00000129968|Q96GS6-2|ABHD17A;nc|ENSG00000129968|Q96GS6-3|ABHD17A 16.149105407346934 0.6992268271266642 2 {[QG]|[NA]}G[NS][YR]PQNA{M(Oxidation (M))|F} 12 9 + 61.625 0.0 0.0 4.6071 4.6071 78.101 0.0 0.0 0.0 3.062792526406 37.45621857330249 3.062792526406 6.429889651240366 0 1.0994850021680094 1.0457574905606752 0.0 0.6861818737241735 {[QG]|[NA]}G[NS][YR]PQNA{M(Oxidation (M))|F};[AG]GG[NS][YR]PQNA{M(Oxidation (M))|F};[AG]N[NS][YR]PQNA{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))K]EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[NS][YR]PQNA{M(Oxidation (M))|F};[AG][WE][YR]PQNA{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))K]EA[AG]QNA{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))K]EAQ[AG]NA{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))K]EAQQGGA{M(Oxidation (M))|F};[HV]NQP[YR]{M(Oxidation (M))|F}DY 4.6071;4.1264;3.8253;3.6372;3.331;3.1356;2.9547;2.9547;2.9547;2.8642 -;-;-;-;-;-;-;-;-;- 805 1 2.081 83534.5 0.5699999928474426 1357 3189 4543 DOHH2_400M_050219_2,4548 DOHH2_400M_050219_2,4548,DTKKTYCFDAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4550 23.205 715.0 168370.0 25 0 17126.0 + 13517 HMPKHPEL 8 129 494.7545381997383 987.4945234662766 2 494.7546874880791 MULTI CID FTMS 0 0 0 4549 105758.8671875 0.8356550715460404 8 -0.228118896484375 1 Unmodified _HMPKHPEL_ chr6:34425221-34425583|48|67.1|0.0|22.68|-|ENST00000494077|RPS10-NUDT3,RPS10;ENSG00000124614|ENST00000648437|RPS10;ENST00000480942.1_1_6:34392413-34392935:-|nuORF;nc|ENSG00000101278|Q9NQ39|RPS10P5 32.30548876998284 0.3644845974844379 2 HM[KP]H[EP]{I|L} 8 0 + 51.165 0.0 0.0 5.1813 5.1813 74.926 0.0 0.0 0.0 27.50759598720936 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 1.4517188504113845 1.2218487496163564 0.3494850021680094 0.0 + + HM[KP]H[EP]{I|L};HM[KP]H{[QN]|[E{I|L}]|[KN]}P;HM{I|L}{I|L}M[KC]{I|L};HM[KP]{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}E];HM{I|L}{I|L}[KA][{M(Oxidation (M))|F}E];HM{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[KC]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KM{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HM][KP]{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[KP]HM{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[KP]MH{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 5.1813;5.003;3.5517;3.5298;3.0913;2.8969;1.3983;1.277;0.94894;0.51758 +;-;-;-;-;-;-;-;-;- + 316 + 1 2.072 94903.3 1.0 1358 3190 4549 DOHH2_400M_050219_2,4550 DOHH2_400M_050219_2,4550,HMPKHPEL False True HMPKHPEL 23.204857 494.754687488079 1100361.75 4549.0 chr6:34425221-34425583|48|67.1|0.0|22.68|-|ENST00000494077|RPS10-NUDT3,RPS10;;nc|ENSG00000101278|Q9NQ39|RPS10P5;;ENSG00000124614|ENST00000648437|RPS10;;ENST00000480942.1_1_6:34392413-34392935:-|nuORF 3.5635529359181723 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4551 23.207 103.0 878270.0 25 0 91396.0 + 16712 KETEIVKKL 9 117 363.22894864619866 1086.665016538796 3 363.2286559939384 MULTI CID FTMS 0 0 0 4549 520894.3125 1.0 0 0.0 2 Unmodified _KETEIVKKL_ ENSG00000115816|ENST00000234170|CEBPZ 79.42699986076722 0.0176555798755335 2 {I|L}KE{[ET]|[MV]}VK{I|L}K 9 4 + 71.704 0.0 0.0 6.5986 6.5986 84.79 0.0 0.0 0.0 5.7826647369189175 5.835682082013776 5.7826647369189175 5.7826647369189175 0 1.7302046884880935 0.0 0.4247425010840047 0.5752574989159953 {I|L}KE{[ET]|[MV]}VK{I|L}K;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TE{I|L}VK{I|L}K;{I|L}KE{[ET]|[MV]}VKK{I|L};{[ET]|[MV]}KE{I|L}VK{I|L}K;{I|L}KE{[ET]|[MV]}V{I|L}KK;[PS][R{M(Oxidation (M))|F}]{I|L}VK{I|L}K;[{I|L}T][SG]E{I|L}VK{I|L}K;{[DS]|[MA]|[CV]|TT}[VG]E{I|L}VK{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}N{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VK{I|L}K;{I|L}KE[RV]{[DS]|[MA]|[CV]|TT}{I|L}K 6.5986;6.0664;6.0615;5.8114;5.3296;4.8135;4.4754;4.317;3.743;3.4886 -;-;-;-;-;-;-;-;-;- 362 + 1 2.072 81755.7 1.0 1359 3190 4549 DOHH2_400M_050219_2,4551 DOHH2_400M_050219_2,4551,KETEIVKKL True True KETEIVKKL 23.207048 363.228655993938 3657719.0625 4549.0 ENSG00000115816|ENST00000234170|CEBPZ 4.861040592193604 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4552 23.209 105.0 678950.0 25 0 56595.0 + 32734 SEASRLAHY 9 91 517.256679274224 1032.498805615248 2 517.2570068240166 MULTI CID FTMS 0 0 0 4549 245357.25 0.4916083669131398 -3 0.1416053771972656 3 Unmodified _SEASRLAHY_ ENSG00000146047|ENST00000274764|H2BC1;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENST00000436555.1_1_1:228651947-228652295:-|nuORF 28.49450938151212 0.1686335738423394 2 AHY 3 6 26.928 0.0 0.0 2.6081 0.0 0.0 643.328416892775 0.0 643.328416892775 0.0 10.601271161010825 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.0 + AHY 2.6081 + + 253 1 2.072 59536.9 1.0 1360 3190 4549 DOHH2_400M_050219_2,4552 DOHH2_400M_050219_2,4552,SEASRLAHY False True SEASRLAHY 23.209294 517.257006824017 2707686.5 4549.0 ENSG00000185130|ENST00000377401|H2BC13;;ENSG00000146047|ENST00000274764|H2BC1;;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;;ENSG00000196890|ENST00000693095|H2BC26 5.172157287597656 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4553 23.223 800.0 238650.0 25 0 26398.0 + 16713 KETEIVKKL 9 152 544.340276006077 1086.665999078954 2 544.3395873904228 MULTI CID FTMS 0 0 0 4549 115965.828125 0.8184044636476242 -2 0.0929737091064453 4 Unmodified _KETEIVKKL_ ENSG00000115816|ENST00000234170|CEBPZ 112.9460926246317 0.0042567307499335 2 ETNKVKK{I|L} 8 3 92.74 0.0 0.0 8.5343 0.0 0.0 128.0954304425797 0.0 128.0954304425797 0.0 79.36777360060142 0.0 0.0 0 2.551203852579394 0.0 1.6936726795685342 1.3226825097560422 ETNKVKK{I|L} 8.5343 - 1591 1 2.072 146908.2 0.5799999833106995 1361 3190 4549 DOHH2_400M_050219_2,4553 DOHH2_400M_050219_2,4553,KETEIVKKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4555 23.228 83.0 798620.0 25 0 87999.0 + 8509 ETDRGMSAEY 10 82 579.7401984212288 1157.4658439092575 2 579.7404052615166 MULTI CID FTMS 0 0 0 4554 756410.125 0.252646190430185 4 -0.1606330871582031 1 Unmodified _ETDRGMSAEY_ ENSG00000100347|ENST00000350028|SAMM50 53.40400417844725 0.0601721406801337 2 SAEY 4 6 50.477 0.0 0.0 4.361 0.0 0.0 689.2811146466812 0.0 689.2811146466812 0.0 20.823872065994564 0.0 0.0 0 0.9247425010840048 0.0 1.2302046884880935 0.0 + SAEY 4.361 + + 205 1 2.072 53810.8 1.0 1362 3191 4554 DOHH2_400M_050219_2,4555 DOHH2_400M_050219_2,4555,ETDRGMSAEY True True ETDRGMSAEY 23.227711 579.740405261517 31886772.0 4554.0 ENSG00000100347|ENST00000350028|SAMM50 7.286532402038574 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4556 23.229 72.0 874720.0 25 0 75506.0 + 29052 QEIGGPRSY 9 85 503.7510036237972 1005.4874543143944 2 503.7514221072197 MULTI CID FTMS 0 0 0 4554 506643.03125 0.4073929847474801 3 -0.1211681365966796 2 Unmodified _QEIGGPRSY_ ENSG00000102393|ENST00000218516|GLA;ENST00000466414.1_1_X:100652799-100653600:-|nuORF 32.78568957990786 0.1150597335874693 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}G[EP]{I|L} 7 4 22.803 0.0 0.0 2.2679 0.0 0.0 0.0 236.06844507388908 236.06844507388908 3.80719686320084 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}G[EP]{I|L} 2.2679 - 58 + 1 2.072 53597.9 1.0 1363 3191 4554 DOHH2_400M_050219_2,4556 DOHH2_400M_050219_2,4556,QEIGGPRSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4557 23.233 177.0 537750.0 25 0 29999.0 + 32715 SEALKDRHW 9 111 381.1964611730998 1140.5675541194994 3 381.1967040896416 MULTI CID FTMS 0 0 0 4554 186051.484375 1.0 0 0.0 3 Unmodified _SEALKDRHW_ ENSG00000197102|ENST00000360184|DYNC1H1 22.774965066869 0.2414061210083823 2 SEA{I|L}KD[KT]SY 10 4 + 69.819 0.0 0.0 6.1214 6.1214 79.222 0.0 0.0 0.0 31.136218907515307 2.272437815030628 2.272437815030628 2.272437815030628 0 0.3494850021680094 2.0 0.5 0.0 SEA{I|L}KD[KT]SY;SEA{I|L}KD[RH]W;SEA{I|L}K[KC]{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F};SEAD[K{I|L}][KT]SY;SEAD[K{I|L}][RH]W;SEW[K{I|L}][KT]SY;SERRD[KT]SY;SERRD[RH]W;SEW[K{I|L}][RH]W;{[WT]|[RM]}{I|L}K{[QC]|[C(Carbamidomethyl (C))A]}{I|L}SY 6.1214;5.9221;5.1692;4.8112;4.2782;4.2385;4.1686;3.9741;3.7102;2.3526 -;+;-;-;-;-;-;-;-;- + 157 + 1 2.072 78592.8 1.0 1364 3191 4554 DOHH2_400M_050219_2,4557 DOHH2_400M_050219_2,4557,SEALKDRHW False True SEALKDRHW 23.232821 381.196704089642 689508.3125 4554.0 ENSG00000197102|ENST00000360184|DYNC1H1 5.679744561513265 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4558 23.237 236.0 262370.0 25 0 50390.0 + 512 AEHDVTVKY 9 74 531.2665290272784 1060.5185051213566 2 531.2659179568291 MULTI CID FTMS 0 0 0 4554 145930.609375 1.0 0 0.0 4 Unmodified _AEHDVTVKY_ ENSG00000146281|ENST00000275072|PM20D2 58.6788170122104 0.0268135626297836 2 {[CP]|[EA]}HDVTVKY 9 0 + 39.803 0.0 0.0 3.7532 3.7532 80.225 0.0 0.0 0.0 4.137342758552698 24.318810282514683 4.137342758552698 9.94850021680094 0 1.3182503180159344 0.0 1.0 0.0 + + {[CP]|[EA]}HDVTVKY;[HD]{[CP]|[EA]}VTVKY;{[CP]|[EA]}HP{[MS]|[{M(Oxidation (M))|F}A]}VKY;{[CP]|[EA]}HPP[YG]KY;[HD]{[TV]|[{I|L}S]}{[CP]|[EA]}VKY;{[CP]|[EA]}HPV{[MS]|[{M(Oxidation (M))|F}A]}KY;{[ES]|[DT]|[{I|L}C]}[HV]{[CP]|[EA]}VKY;[HD]{[TV]|[{I|L}S]}[W{I|L}]KY;[HD]{[TV]|[{I|L}S]}V{[CP]|[EA]}KY;{[CP]|[EA]}H[{I|L}T]{[CP]|[EA]}KY 3.7532;2.8151;2.782;2.3147;1.9606;1.5768;1.2268;1.1621;1.1385;0.75955 +;-;-;-;-;-;-;-;-;- + 134 1 2.072 54657.9 1.0 1365 3191 4554 DOHH2_400M_050219_2,4558 DOHH2_400M_050219_2,4558,AEHDVTVKY True True AEHDVTVKY 23.237258 531.265917956829 686369.9375 4554.0 ENSG00000146281|ENST00000275072|PM20D2 6.4865485827128095 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4559 23.251 800.0 164110.0 25 0 8131.7 + + -1 DTDARFGHGSDY 12 123 670.779239359418 1339.543925785636 2 670.7779418826103 MULTI CID FTMS 0 0 0 4554 97380.515625 0.5545736476047816 -2 0.0875072479248046 5 2 Carbamidomethyl (C) _ESDPPC(Carbamidomethyl (C))C(Carbamidomethyl (C))LVTY_ ENSG00000137776|ENST00000380516|SLTM;nc|ENSG00000137776|Q9NWH9-3|SLTM 34.40172386719151 0.2986346176549658 2 DTDAR{M(Oxidation (M))|F}GHGSDY 12 -1 + 96.593 0.0 0.0 7.2109 7.2109 83.035 0.0 0.0 0.0 2.8054171723645425 2.8054171723645425 2.8054171723645425 2.8054171723645425 0 3.992992819099939 2.0 0.4247425010840047 0.0 DTDAR{M(Oxidation (M))|F}GHGSDY;{[ES]|[DT]|[{I|L}C]}DAR{M(Oxidation (M))|F}GHGSDY;DTWR{M(Oxidation (M))|F}GHGSDY;DTDA[VG]{M(Oxidation (M))|F}GHGSDY;DTDA[MT]KHGSDY;DTD[{M(Oxidation (M))|F}V]GKHGSDY;{[DS]|[MA]|[CV]|TT}EAR{M(Oxidation (M))|F}GHGSDY;DTD[R{M(Oxidation (M))|F}]KHGSDY;DT[HS]HGKHGSDY;DT[HS]HG{M(Oxidation (M))|F}[YV]DY 7.2109;7.0015;6.625;6.5317;6.5087;6.4917;6.4294;6.3713;6.026;5.9762 -;-;-;-;-;-;-;-;-;- 2126 + 1 2.072 100863.2 0.5799999833106995 1366 3191 4554 DOHH2_400M_050219_2,4559 DOHH2_400M_050219_2,4559,ESDPPCCLVTY False False DTDARFGHGSDY 23.251098 670.77794188261 945194.9375 4554.0 ENSG00000137776|ENST00000380516|SLTM;;nc|ENSG00000137776|Q9NWH9-3|SLTM 9.629266738891602 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4561 23.267 800.0 138210.0 25 0 6969.1 + + 14498 AVLKKTTL 8 140 437.2919047818133 872.5692566304266 2 437.2915832400322 MULTI CID FTMS 0 0 0 4560 44412.7578125 0.4315188665438794 1 -0.0429515838623046 1 Unmodified _IGLKTKLT_ nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1 24.020572477871973 0.5389365498350341 2 {I|L}G{I|L}K 4 -1 51.23 0.0 0.0 5.8712 0.0 0.0 0.0 458.2624605768188 458.2624605768188 38.13100339696028 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}G{I|L}K 5.8712 + + 111 + 1 2.072 90573.7 0.9100000262260436 1367 3192 4560 DOHH2_400M_050219_2,4561 DOHH2_400M_050219_2,4561,IGLKTKLT False False AVLKKTTL 23.267225 437.291583240032 486329.15625 4560.0 nc|ENSG00000127463|Q8N766-4|EMC1;;nc|ENSG00000127463|Q8N766-2|EMC1;;ENSG00000127463|ENST00000477853|EMC1;;nc|ENSG00000127463|Q8N766-3|EMC1 2.6666892766952515 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4562 23.268 46.0 1732300.0 25 0 258640.0 + 45446 YTDVSTRY 8 82 502.7378810610755 1003.461209188951 2 502.7378112673759 MULTI CID FTMS 0 0 0 4560 825074.0625 0.0858002660193435 -4 0.1552486419677734 2 Unmodified _YTDVSTRY_ ENSG00000213593|ENST00000278422|TMX2;ENST00000436507.2_1_9:37885847-37886384:+|nuORF;nc|ENSG00000213593|Q9Y320-2|TMX2 39.94969957227396 0.2351327405675156 2 YTDVS 5 3 63.443 0.0 0.0 6.3225 0.0 0.0 0.0 435.2000216119751 435.2000216119751 47.245462655597095 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + YTDVS 6.3225 + + 116 + 1 2.072 70708.7 1.0 1368 3192 4560 DOHH2_400M_050219_2,4562 DOHH2_400M_050219_2,4562,YTDVSTRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4563 23.271 95.0 999160.0 25 0 88569.0 + 11078 GEDVETSKKW 10 106 393.5278702069271 1177.5617812209812 3 393.5277587771416 MULTI CID FTMS 0 0 0 4560 388642.375 0.4073782346976793 -4 0.1552486419677734 3 Unmodified _GEDVETSKKW_ ENSG00000107223|ENST00000224073|EDF1;nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1 28.181266145913348 0.3355154477840527 2 {[DA]|[EG]}DVETSKKW 10 0 + 77.133 0.0 0.0 6.5502 6.5502 93.841 0.0 0.0 0.0 39.24024714504206 11.760912590556812 11.760912590556812 30.32705968907152 0 0.3494850021680094 1.6989700043360187 0.805462187404089 0.0 + + {[DA]|[EG]}DVETSKKW;{[DA]|[EG]}DV[WM]KKW;{[DA]|[EG]}DV{M(Oxidation (M))|F}GK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PA];{[DA]|[EG]}D[R{M(Oxidation (M))|F}]K{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PA];W[MT][DP]SKKW;{[DA]|[EG]}[MT]WK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PA];W[MT]EGK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PA] 6.5502;3.9748;3.9008;2.4109;2.2764;2.1552;1.6439 +;-;-;-;-;-;- + 496 + 1 2.072 81512.8 1.0 1369 3192 4560 DOHH2_400M_050219_2,4563 DOHH2_400M_050219_2,4563,GEDVETSKKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4564 23.273 129.0 585280.0 25 0 49826.0 + 11079 GEDVETSKKW 10 83 589.7884187685804 1177.5622846039607 2 589.7876464724541 MULTI CID FTMS 0 0 0 4560 340414.46875 0.4078257754043529 -2 0.0622749328613281 4 Unmodified _GEDVETSKKW_ ENSG00000107223|ENST00000224073|EDF1;nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1 47.05281240577143 0.0974485010253181 2 {[DA]|[EG]}DVETSKKW 10 0 + 85.883 0.0 0.0 7.2933 7.2933 86.744 0.0 0.0 0.0 37.4417382070186 12.306634937682148 12.306634937682148 5.91251590079672 0 1.8494850021680087 1.5228787452803376 0.8494850021680094 0.0 + + {[DA]|[EG]}DVETSKKW;{[DA]|[EG]}DV{[MG]|[TS]}EKKW;{[DA]|[EG]}DV[WM]KKW;{[DA]|[EG]}D{[WT]|[RM]}EKKW;{[DA]|[EG]}D[R{M(Oxidation (M))|F}][Q{I|L}]KW;{[DA]|[EG]}[MT]W[Q{I|L}]KW;W[MT][DP]SKKW;W{[CT]|[{M(Oxidation (M))|F}G]}DV[Q{I|L}]KW;{[DA]|[EG]}[Q{I|L}]K[MT]WW;[KS]TKEVD{[DA]|[EG]}W 7.2933;6.7912;5.5525;5.5151;3.5171;2.8369;2.707;2.4752;1.966;1.8559 +;-;-;-;-;-;-;-;-;- + 616 + 1 2.072 58900.3 1.0 1370 3192 4560 DOHH2_400M_050219_2,4564 DOHH2_400M_050219_2,4564,GEDVETSKKW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4565 23.277 186.0 344740.0 25 0 46658.0 + 7017 EEKTGNAW 8 91 467.7171859473359 933.4198189614718 2 467.7171203494072 MULTI CID FTMS 0 0 0 4560 288217.1875 0.7212492295189681 -2 0.0622749328613281 5 Unmodified _EEKTGNAW_ ENSG00000143799|ENST00000366794|PARP1 12.531546534597751 0.7257836412119636 2 V{[HG]|PP}NG{[HG]|PP}AW 9 6 + 27.63 0.0 0.0 2.96 2.96 73.154 0.0 0.0 0.0 2.557809497117841 4.616808377508196 2.557809497117841 6.478174818886377 0 0.0 0.0 0.0 0.3807196863200844 V{[HG]|PP}NG{[HG]|PP}AW;V{[HG]|PP}NG[HQ]W;EEKG{[QS]|[NT]}AW;[DP][VG]TGNA{[CT]|[{M(Oxidation (M))|F}G]};V{[SA]|[TG]}EG{[QS]|[NT]}AW;[H{I|L}]{[CT]|[{M(Oxidation (M))|F}G]}WA{[CT]|[{M(Oxidation (M))|F}G]};[DP][VG]ASNA{[CT]|[{M(Oxidation (M))|F}G]};[DP]KVSNA{[CT]|[{M(Oxidation (M))|F}G]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W{[QS]|[NT]}AW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[HG]|PP}GN{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 2.96;2.266;2.2512;1.9227;1.6552;1.6367;1.5388;1.5024;1.3458;1.2247 -;-;-;-;-;-;-;-;-;- 365 + 1 2.072 53045.9 1.0 1371 3192 4560 DOHH2_400M_050219_2,4565 DOHH2_400M_050219_2,4565,EEKTGNAW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4566 23.28 176.0 257990.0 25 0 34488.0 + -1 MLDHQPPQY 9 81 572.7582478530649 0 572.7591430544853 PEAK CID FTMS 0 0 0 4560 147098.15625 1.0 0 0.0 6 Oxidation (M) _M(Oxidation (M))LDHQPPQY_ ENSG00000108604|ENST00000448276|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;nc|ENSG00000108604|Q92925-3|SMARCD2 24.020572477871973 0.1646235280836931 2 PQ 2 -1 16.454 0.0 0.0 1.4389 0.0 0.0 406.1846073966353 509.1823214166625 915.3669288132978 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 PQ 1.4389 + + 37 + 1 2.072 43710.9 1.0 1372 3192 4560 DOHH2_400M_050219_2,4566 DOHH2_400M_050219_2,4566,MLDHQPPQY False False MLDHQPPQY 23.280196 572.759143054485 1169171.25 4560.0 ENSG00000108604|ENST00000448276|SMARCD2;;nc|ENSG00000108604|Q92925-2|SMARCD2;;nc|ENSG00000108604|Q92925-3|SMARCD2 7.580397764841716 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4567 23.294 800.0 98427.0 25 0 3687.6 + 43381 WQHFANAHQAF 11 95 678.813525831397 1355.612498729594 2 678.8129760622978 MULTI CID FTMS 0 0 0 4560 82071.5546875 0.988156319166368 -1 0.0279445648193359 7 Unmodified _WQHFANAHQAF_ REV__ENSG00000197694|ENST00000372739|SPTAN1;REV__nc|ENSG00000197694|Q13813-3|SPTAN1;REV__nc|ENSG00000197694|Q13813|SPTAN1 18.1463463914782 0.6576820063886638 2 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F} 13 -1 + 93.453 0.0 0.0 6.8938 6.8938 87.804 0.0 0.0 0.0 13.539265097321476 16.642078980768062 13.539265097321476 7.7815125038364386 0 1.0228787452803376 1.0457574905606752 0.0 1.2302046884880935 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA[HV]EA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA[HV]EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA[HV]EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}Q[HV]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG[HV]EAQQNA{M(Oxidation (M))|F};EE[YK]EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[HV]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}AQ[AG]NA{M(Oxidation (M))|F} 6.8938;6.3198;6.2245;6.2245;6.2245;6.123;6.0389;5.895;5.8544;5.6505 -;-;-;-;-;-;-;-;-;- 906 1 2.072 63157.0 0.550000011920929 1373 3192 4560 DOHH2_400M_050219_2,4567 DOHH2_400M_050219_2,4567,WQHFANAHQAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4569 23.301 198.0 303180.0 25 0 59438.0 -1 LSSPVCRM 8 75 483.2328610774199 964.4511692216398 2 484.2362243533134 MULTI CID FTMS 0 0 0 4568 187422.921875 0.5981300251118464 -3 0.1052265167236328 1 Carbamidomethyl (C),Oxidation (M) _LSSPVC(Carbamidomethyl (C))RM(Oxidation (M))_ ENST00000325421.6_1_19:56089250-56089286:-|nuORF 14.581692164780916 0.6954967302934248 2 Y 1 -1 16.99 0.0 0.0 1.7616 0.0 0.0 783.3767653903883 0.0 783.3767653903883 0.0 5.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.7616 - 81 + 1 2.067 53232.9 1.0 1374 3193 4568 DOHH2_400M_050219_2,4569 DOHH2_400M_050219_2,4569,LSSPVCRM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4570 23.315 800.0 54772.0 25 0 12608.0 -1 0 34 1180.4845337937652 3538.431771981496 3 1180.819384753704 MULTI CID FTMS 0 0 0 4568 75949.3125 0.7820496360173415 1 -0.050271987915039 2 2 E 1 -1 5.4846 0.0 0.0 0.155 0.0 0.0 2882.204063096533 524.1630343072874 3406.367097403821 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.155 - 3 + 1 2.067 44963.7 0.3899999856948852 1375 3193 4568 DOHH2_400M_050219_2,4570 DOHH2_400M_050219_2,4570, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4571 23.318 148.0 417340.0 25 0 26120.0 + -1 GVVTDMFTAI 10 89 535.2673496785488 1068.5201464238976 2 535.2667724490166 MULTI CID FTMS 0 0 0 4568 378409.34375 0.4633206762000745 -2 0.0708961486816406 3 Oxidation (M) _GVVTDM(Oxidation (M))FTAI_ REV__ENSG00000164659|ENST00000450689|ELAPOR2 34.10243960390752 0.2198439752719791 2 A{I|L} 2 -1 26.013 0.0 0.0 2.4345 0.0 0.0 866.3879270408883 0.0 866.3879270408883 0.0 7.08674701179433 0.0 0.0 0 0.6549471895720985 0.0 0.0 0.0 A{I|L} 2.4345 + + 180 + 1 2.067 51618.8 1.0 1376 3193 4568 DOHH2_400M_050219_2,4571 DOHH2_400M_050219_2,4571,GVVTDMFTAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4572 23.33 700.0 224720.0 25 0 57686.0 + 30475 REAPERPSL 9 139 527.7857043539088 1053.5568557746176 2 527.7855102419853 MULTI CID FTMS 0 0 0 4568 100496.3671875 0.256923893851124 -10 0.4417629241943359 4 Unmodified _REAPERPSL_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000489266.5_1_10:123734227-123734680:-|nuORF;nc|ENSG00000107672|Q9NXX6-2|NSMCE4A 20.580933911654288 0.2795815587326093 2 {I|L}{[DS]|[MA]|[CV]|TT}R 4 7 30.802 0.0 0.0 2.9236 0.0 0.0 0.0 579.2522066705686 579.2522066705686 4.062959475437751 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.8494850021680094 {I|L}{[DS]|[MA]|[CV]|TT}R 2.9236 - 463 + 1 2.067 125905.7 1.0 1377 3193 4568 DOHH2_400M_050219_2,4572 DOHH2_400M_050219_2,4572,REAPERPSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4573 23.344 800.0 100890.0 25 0 10576.0 + 31223 RLREYELQG 9 110 582.3105764638213 0 582.3109619021416 PEAK CID FTMS 0 0 0 4568 78038.6640625 1.0 0 0.0 5 Unmodified _RLREYELQG_ REV__ENSG00000137494|ENST00000533342|ANKRD42;REV__ENST00000528190.1_1_11:82958997-82971147:+|nuORF 10.823927491677226 0.3028200641087142 2 {I|L}Y[KQ]TTP 7 -1 32.039 0.0 0.0 2.7558 0.0 0.0 203.0763950406827 125.07251917056875 328.14891421125145 0.0 0.0 0.0 0.0 0 0.5 0.0 0.805462187404089 0.4247425010840047 {I|L}Y[KQ]TTP 2.7558 - 182 + 1 2.067 64501.3 0.5299999713897705 1378 3193 4568 DOHH2_400M_050219_2,4573 DOHH2_400M_050219_2,4573,RLREYELQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4575 23.349 92.0 612020.0 25 0 115260.0 35707 SVGLNVPASV 10 64 471.76771174447646 941.5208705557528 2 471.7664977908134 MULTI CID FTMS 0 0 0 4574 339362.78125 0.1328798248370389 5 -0.0816459655761718 1 Unmodified _SVGLNVPASV_ ENSG00000169021|ENST00000304863|UQCRFS1;nc|ENSG00000226085|P0C7P4|UQCRFS1P1 22.736283301280096 0.4578556481593033 2 [TA]A{I|L}N 5 8 16.26 0.0 0.0 1.7269 0.0 0.0 0.0 468.2452717610842 468.2452717610842 4.269856214892375 0.0 0.0 0.0 0 0.5 0.0 0.2614393726401688 0.2614393726401688 [TA]A{I|L}N 1.7269 - 89 1 2.067 50850.6 1.0 1379 3194 4574 DOHH2_400M_050219_2,4575 DOHH2_400M_050219_2,4575,SVGLNVPASV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4576 23.356 411.0 198820.0 25 0 30898.0 + 6444 EAETIRDVY 9 110 548.2695072349417 0 548.2706786990166 PEAK CID FTMS 0 0 0 4574 117910.5234375 0.9933681978102724 1 -0.0394649505615234 2 Unmodified _EAETIRDVY_ REV__ENSG00000128512|ENST00000428084|DOCK4;REV__ENST00000476846.1_7:111503332-111846439:-|nuORF;REV__ENST00000492532.1_7:111509614-111512393:-|nuORF;REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4;REV__nc|ENSG00000128512|Q8N1I0|DOCK4 32.30548876998284 0.0995446103270859 2 V 1 -1 11.237 0.0 0.0 1.0267 0.0 0.0 814.3819272122677 178.0515078180297 992.4334350302972 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V 1.0267 + + 66 + 1 2.067 69167.2 1.0 1380 3194 4574 DOHH2_400M_050219_2,4576 DOHH2_400M_050219_2,4576,EAETIRDVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4577 23.37 800.0 341020.0 25 0 81575.0 + 30465 READQPLRTY 10 129 624.8202521596013 1247.6259513860025 2 624.8199340701103 MULTI CID FTMS 0 0 0 4574 183467.3125 0.2126073873081485 -10 0.408395767211914 3 Unmodified _READQPLRTY_ ENSG00000145041|ENST00000684031|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;nc|ENSG00000145041|Q9Y4B6-3|DCAF1 83.6515911177208 0.014075193558362 2 [VG]EWQ[{I|L}P]RTY 10 4 + 80.555 0.0 0.0 6.4567 6.4567 86.353 0.0 0.0 0.0 52.28433602588986 9.269359821608816 9.269359821608816 7.754537344402905 0 3.0 2.0 0.6549471895720985 0.805462187404089 [VG]EWQ[{I|L}P]RTY;READQ[{I|L}P]RTY;[VG]EW[AG][{I|L}P]RTY;READ[AG][{I|L}P]RTY;QQQSQ[{I|L}P]RTY;[W{I|L}]GDQ[{I|L}P]RTY;{[RE]|[WV]}ADQ[{I|L}P]RTY;{[WT]|[RM]}PSQ[{I|L}P]RTY;QQ[AG]SQ[{I|L}P]RTY;QQQS[AG][{I|L}P]RTY 6.4567;5.8352;5.7221;5.1006;4.5444;4.5347;4.2115;4.0328;3.8099;3.8099 -;+;-;-;-;-;+;-;-;- + 978 + 1 2.067 198213.5 0.7699999809265137 1381 3194 4574 DOHH2_400M_050219_2,4577 DOHH2_400M_050219_2,4577,READQPLRTY True True READQPLRTY 23.37006 624.81993407011 14174743.5 4574.0 nc|ENSG00000145041|Q9Y4B6-2|DCAF1;;nc|ENSG00000145041|Q9Y4B6-3|DCAF1;;ENSG00000145041|ENST00000684031|DCAF1 9.233758290608725 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4578 23.384 800.0 299710.0 25 0 31192.0 + 7316 EEVRQGLKAY 10 142 596.8201433278764 1191.6257337225527 2 596.8201782107353 MULTI CID FTMS 0 0 0 4574 177959.21875 0.5028663149033629 -2 0.0932235717773437 4 Unmodified _EEVRQGLKAY_ ENSG00000108010|ENST00000331244|GLRX3;ENSG00000108010|ENST00000331244|GLRX3 97.28384467902475 0.0088116368208165 2 EEVRQG{I|L}KAY 10 0 + 97.023 0.0 0.0 8.1421 8.1421 91.83 0.0 0.0 0.0 17.32074136960165 16.53212513775344 16.53212513775344 9.164539485499262 0 2.417735320183944 1.3979400086720375 2.249134866972623 0.0 + + EEVRQG{I|L}KAY;EEVR[AG]G{I|L}KAY;{[QV]|[N{I|L}]|[RA]|[KV]}AQSQG{I|L}KAY;[QA]VQSQG{I|L}KAY;[AG]AVQSQG{I|L}KAY;{[QV]|[N{I|L}]|[RA]|[KV]}AQS[AG]G{I|L}KAY;[QA]VQS[AG]G{I|L}KAY;[AG]VAQSQG{I|L}KAY;[AG]AVQS[AG]G{I|L}KAY;{[QV]|[N{I|L}]|[RA]|[KV]}A[RV]EEKAY 8.1421;7.373;6.6886;6.5081;6.1344;5.9225;5.742;5.4906;5.3709;4.8657 +;-;-;-;-;-;-;-;-;- + 998 1 2.067 176378.4 0.7400000095367432 1382 3194 4574 DOHH2_400M_050219_2,4578 DOHH2_400M_050219_2,4578,EEVRQGLKAY True True EEVRQGLKAY 23.383891 596.820178210735 2033661.125 4574.0 ENSG00000108010|ENST00000331244|GLRX3 7.0588908195495605 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4580 23.388 32.0 2368500.0 25 0 472860.0 + 29020 QEDRPGLHAY 10 96 395.8601579178649 1184.5586443537948 3 395.8595153689384 MULTI CID FTMS 0 0 0 4579 1524002.625 0.9714679587040772 -1 0.0394649505615234 1 Unmodified _QEDRPGLHAY_ ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1 21.59015148037692 0.4836074274810599 2 HAY 3 7 26.427 0.0 0.0 2.2309 0.0 0.0 795.3900480176604 0.0 795.3900480176604 0.0 15.056584229283844 0.0 0.0 0 0.5 0.0 0.0 0.0 + HAY 2.2309 + + 75 + 1 2.067 65402.9 1.0 1383 3195 4579 DOHH2_400M_050219_2,4580 DOHH2_400M_050219_2,4580,QEDRPGLHAY False True QEDRPGLHAY 23.388343 395.859515368938 22400686.5 4579.0 ENSG00000130592|ENST00000311604|LSP1;;nc|ENSG00000130592|P33241-3|LSP1;;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;;nc|ENSG00000130592|P33241-2|LSP1 7.696878751118978 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4581 23.391 119.0 596580.0 25 0 77151.0 + 15691 IQRLETMK 8 94 509.7892604296919 1017.563967926184 2 509.7894470095634 MULTI CID FTMS 0 0 0 4579 612990.125 0.1900872329946516 5 -0.0583724975585937 2 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 29.081581746732265 0.4323690340403521 2 {I|L}MTMK 5 -1 52.053 0.0 0.0 5.1154 0.0 0.0 395.2215739826276 0.0 395.2215739826276 0.0 28.865006360318688 0.0 0.0 0 1.424742501084005 0.0 0.2614393726401688 0.3252574989159953 {I|L}MTMK 5.1154 - 116 + 1 2.067 59767.6 1.0 1384 3195 4579 DOHH2_400M_050219_2,4581 DOHH2_400M_050219_2,4581,IQRLETMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4582 23.392 66.0 1004600.0 25 0 56273.0 + 6513 EAKQRLQQL 9 104 557.3225621088783 1112.6305712845565 2 557.3223144412041 MULTI CID FTMS 0 0 0 4579 867306.5 0.380323274553152 -9 0.3508930206298828 3 Unmodified _EAKQRLQQL_ ENSG00000196683|ENST00000358435|TOMM7;ENST00000463284.2_1_7:22852718-22862419:-|nuORF;ENST00000496129.1_1_7:22857608-22862419:-|nuORF 92.65332237495696 0.0139087009896299 2 EAKQV 5 5 54.876 0.0 0.0 4.9321 0.0 0.0 0.0 554.3161715143186 554.3161715143186 -2.330664636752907 0.0 -2.330664636752907 0.0 0 0.2396518287104437 1.5228787452803376 0.0 0.3807196863200844 EAKQV 4.9321 - 574 + 1 2.067 52039.9 1.0 1385 3195 4579 DOHH2_400M_050219_2,4582 DOHH2_400M_050219_2,4582,EAKQRLQQL True True EAKQRLQQL 23.392401 557.322314441204 22367156.0 4579.0 ENST00000496129.1_1_7:22857608-22862419:-|nuORF;;ENSG00000196683|ENST00000358435|TOMM7;;ENST00000463284.2_1_7:22852718-22862419:-|nuORF 5.787078698476155 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4583 23.395 111.0 830630.0 25 0 66811.0 + 29022 QEDRPGLHAY 10 93 593.2863753103956 0 593.2858764529228 PEAK CID FTMS 0 0 0 4579 534634.5625 0.8792872452795434 -1 0.0394649505615234 4 Unmodified _QEDRPGLHAY_ ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1 77.04852534044906 0.0004100226835071 2 AH{I|L} 3 9 28.188 0.0 0.0 2.3796 0.0 0.0 181.0734444674512 679.2830294244749 860.356473891926 0.0 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.0 AH{I|L} 2.3796 - 89 + 1 2.067 73968.4 1.0 1386 3195 4579 DOHH2_400M_050219_2,4583 DOHH2_400M_050219_2,4583,QEDRPGLHAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4585 23.399 94.0 705020.0 25 0 49083.0 -1 ISPSRMPQPPN 11 89 620.3132283273969 1238.6119037215938 2 620.3134033083916 MULTI CID FTMS 0 0 0 4584 590814.1875 0.789171640960571 -13 0.5423393249511719 1 Oxidation (M) _ISPSRM(Oxidation (M))PQPPN_ ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP 14.40537977576856 0.7354982482299568 2 {[HG]|PP}AMPPPPP[QP]N 12 -1 {[HG]|PP}AM + + 68.894 16.198 4.0885 5.5622 5.5622 57.653 0.0 0.0 0.0 0.0 45.66229003050815 0.0 0.0 0 2.774227503252014 0.0 0.0 1.3807196863200843 {[HG]|PP}AMPPPPP[QP]N 5.5622 - 1835 + 1 2.067 56709.6 1.0 1387 3196 4584 DOHH2_400M_050219_2,4585 DOHH2_400M_050219_2,4585,ISPSRMPQPPN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4586 23.401 101.0 671250.0 25 0 35530.0 + 7317 EEVRQGLKAY 10 104 398.2156580657154 1191.625144797346 3 398.2155029177666 MULTI CID FTMS 0 0 0 4584 478915.15625 1.0 0 0.0 2 Unmodified _EEVRQGLKAY_ ENSG00000108010|ENST00000331244|GLRX3;ENSG00000108010|ENST00000331244|GLRX3 16.565877749689598 0.5695826726197942 2 VAK 3 8 21.682 0.0 0.0 1.8196 0.0 0.0 439.1572684990403 451.2435091608032 890.4007776598435 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6989700043360187 VAK 1.8196 - 407 + 1 2.067 60111.3 1.0 1388 3196 4584 DOHH2_400M_050219_2,4586 DOHH2_400M_050219_2,4586,EEVRQGLKAY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4587 23.404 140.0 704500.0 25 0 145850.0 33753 SLALSDLLI 9 105 472.7862417789793 943.5579306247588 2 472.7850219607353 MULTI CID FTMS 0 0 0 4584 341198.53125 0.8968569785259065 -8 0.298776626586914 3 Unmodified _SLALSDLLI_ ENSG00000186867|ENST00000394427|QRFPR;ENST00000512235.1_1_4:122261523-122301889:-|nuORF 11.640296217721598 0.521594087909532 2 {[SA]|[TG]}{I|L}{I|L}S 5 5 21.183 0.0 0.0 2.245 0.0 0.0 0.0 469.2692092714962 469.2692092714962 8.999292560264674 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 {[SA]|[TG]}{I|L}{I|L}S 2.245 - 119 1 2.067 83276.7 1.0 1389 3196 4584 DOHH2_400M_050219_2,4587 DOHH2_400M_050219_2,4587,SLALSDLLI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4588 23.413 512.0 217780.0 25 0 12508.0 + 7056 EELGHTETY 9 146 539.7382455074808 1077.4619380817614 2 539.7379638552666 MULTI CID FTMS 0 0 0 4584 210495.859375 0.7298931134161999 -5 0.1714725494384765 4 Unmodified _EELGHTETY_ ENSG00000064932|ENST00000361757|SBNO2;ENST00000592222.5_1_19:1115804-1132196:-|nuORF;nc|ENSG00000064932|Q9Y2G9-3|SBNO2 77.98433622928108 0.0180125044636492 2 TET{[HG]|PP}ATY 8 4 40.984 0.0 0.0 3.8038 0.0 0.0 199.0829230444552 0.0 199.0829230444552 0.0 17.810253421807545 0.0 0.0 0 0.3054621874040891 0.0 1.5356668758921828 0.0 TET{[HG]|PP}ATY 3.8038 - 2419 + 1 2.067 88594.9 1.0 1390 3196 4584 DOHH2_400M_050219_2,4588 DOHH2_400M_050219_2,4588,EELGHTETY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4591 23.422 108.0 351820.0 25 0 16214.0 + -1 CLCFAPCIAF 10 76 629.7757345009039 1257.5369160686078 2 629.7760497927666 MULTI CID FTMS 0 0 0 4590 470237.53125 1.0 0 0.0 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 18.13498045792455 0.5432546531930572 2 [QA]HDEAGAQNA{M(Oxidation (M))|F} 12 -1 + 65.694 0.0 0.0 5.224 5.224 75.243 0.0 0.0 0.0 3.556518697048716 38.827286450898185 3.556518697048716 1.840601887269571 0 0.3807196863200844 0.0 0.2887254899964357 0.5 [QA]HDEAGAQNA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEAGANQA{M(Oxidation (M))|F};[QA]HDEAQNQA{M(Oxidation (M))|F};[QA]HDEQAQNA{M(Oxidation (M))|F};[QA]HDEAGAQGGA{M(Oxidation (M))|F};[QA]HDEAGA[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}A[MT]YGAQNA{M(Oxidation (M))|F};[QA]HDEQANQA{M(Oxidation (M))|F};[HD][QA]EAGAQNA{M(Oxidation (M))|F} 5.224;5.0777;4.9847;4.8383;4.6983;4.5005;4.5005;4.4669;4.4589;4.3518 -;-;-;-;-;-;-;-;-;- 2539 1 2.067 34948.5 1.0 1391 3198 4590 DOHH2_400M_050219_2,4591 DOHH2_400M_050219_2,4591,CLCFAPCIAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4592 23.424 122.0 627220.0 25 0 36753.0 + 7297 EEVHDLERKY 10 89 439.8862752475893 1316.636996342968 3 439.8861266970634 MULTI CID FTMS 0 0 0 4590 521459.9375 1.0 0 0.0 2 Unmodified _EEVHDLERKY_ ENSG00000187109|ENST00000618691|NAP1L1;ENSG00000205531|ENST00000380542|NAP1L4;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000205531|Q99733-2|NAP1L4 43.9818466556824 0.1155196613165264 2 EEVHD{I|L}E[RK]Y 10 0 EE + + 39.245 14.922 5.7816 2.9807 2.9807 48.845 0.0 0.0 0.0 0.0 23.086681479559203 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.3494850021680094 + + EEVHD{I|L}E[RK]Y 2.9807 + + 155 + 1 2.067 66053.4 1.0 1392 3198 4590 DOHH2_400M_050219_2,4592 DOHH2_400M_050219_2,4592,EEVHDLERKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4593 23.426 88.0 646260.0 25 0 61986.0 + 4789 DENGKISRL 9 91 516.278168491395 1030.54178404959 2 516.2779418826103 MULTI CID FTMS 0 0 0 4590 302880.65625 0.6155429829854954 -1 0.0038204193115234 3 Unmodified _DENGKISRL_ ENSG00000143947|ENST00000272317|RPS27A;ENST00000591758.1_1_16:61089351-61089522:-|nuORF 37.07464296494664 0.0915153923251136 2 DENGK{I|L}S[R{I|L}] 9 0 + 82.63 0.0 0.0 8.0181 8.0181 92.373 0.0 0.0 0.0 70.15539695625556 4.762036441594191 4.762036441594191 9.208187539523747 0 0.7742275032520141 2.0 0.3807196863200844 0.4247425010840047 + + DENGK{I|L}S[R{I|L}];DEGGGK{I|L}S[R{I|L}];DE[W{I|L}]{I|L}S[R{I|L}] 8.0181;7.1245;5.523 +;-;- + 71 + 1 2.067 49282.9 1.0 1393 3198 4590 DOHH2_400M_050219_2,4593 DOHH2_400M_050219_2,4593,DENGKISRL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4595 23.434 235.0 295390.0 25 0 31714.0 15788 ISEFDIVY 8 98 493.2461817266127 984.4778105200254 2 493.7473022341728 MULTI CID FTMS 0 0 0 4594 77640.703125 0.7070417100118799 2 -0.0425605773925781 1 Unmodified _ISEFDIVY_ nc|ENSG00000268758|Q86SQ3-2|ADGRE4P 26.34127834903884 0.4900704351052977 2 {[TV]|[{I|L}S]}E[QP]TV[DP] 9 5 + 37.572 0.0 0.0 3.8164 3.8164 81.55 0.0 0.0 0.0 13.18970823534078 25.582137524178 13.18970823534078 13.996233543367795 0 0.5 1.3979400086720375 0.75 0.0 {[TV]|[{I|L}S]}E[QP]TV[DP];{[ET]|[MV]}V[QP]TV[DP];[DP][WR]TV[DP];{[ET]|[MV]}VT{[HG]|PP}[WR];{[ET]|[MV]}VT[QP][DP]V;{[DS]|[MA]|[CV]|TT}[Q{I|L}][DP]V[DP];{[ET]|[MV]}VT{[HG]|PP}[VG]SV 3.8164;2.3947;2.1116;1.8447;1.0615;0.46444;0.22854 -;-;-;-;-;-;- 251 1 2.063 56027.1 1.0 1394 3199 4594 DOHH2_400M_050219_2,4595 DOHH2_400M_050219_2,4595,ISEFDIVY False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 4596 23.437 132.0 670980.0 25 0 352260.0 + 44225 YLHLGHLS 8 66 470.2560303897932 0 470.2551757693291 PEAK CID FTMS 0 0 0 4594 404332.0 0.7520849325556855 -4 0.0421810150146484 2 Unmodified _YLHLGHLS_ REV__ENSG00000170927|ENST00000371117|PKHD1;REV__nc|ENSG00000170927|P08F94-2|PKHD1 9.347437153973935 0.5488964601725408 2 HD 2 -1 11.766 0.0 0.0 1.2537 0.0 0.0 601.3211295278302 82.06691156558827 683.3880410934185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 HD 1.2537 - 27 + 1 2.063 72562.7 1.0 1395 3199 4594 DOHH2_400M_050219_2,4596 DOHH2_400M_050219_2,4596,YLHLGHLS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4597 23.442 303.0 256840.0 25 0 32810.0 -1 VTEMAFHH 8 127 494.2232942149196 986.4320354966392 2 494.2234985232353 MULTI CID FTMS 0 0 0 4594 220402.546875 1.0 0 0.0 3 Oxidation (M) _VTEM(Oxidation (M))AFHH_ nc|ENSG00000079385|P13688-9|CEACAM1 19.438996006549623 0.6237395211498085 2 VTE 3 -1 43.015 0.0 0.0 4.3607 0.0 0.0 0.0 654.2501645396651 654.2501645396651 25.390821784153346 0.0 0.0 0.0 0 0.3807196863200844 1.3010299956639813 0.0 0.0 VTE 4.3607 + + 223 + 1 2.063 63786.6 1.0 1396 3199 4594 DOHH2_400M_050219_2,4597 DOHH2_400M_050219_2,4597,VTEMAFHH False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 4599 23.458 800.0 137380.0 25 0 12779.0 + 7298 EEVHDLERKY 10 99 659.3260488644349 1316.6375447956698 2 659.3242675662041 MULTI CID FTMS 0 0 0 4598 94524.0546875 0.7484398172084237 3 -0.0602474212646484 1 Unmodified _EEVHDLERKY_ ENSG00000187109|ENST00000618691|NAP1L1;ENSG00000205531|ENST00000380542|NAP1L4;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000205531|Q99733-2|NAP1L4 57.10758569107544 0.0441734977746303 2 EEVHD{I|L}ERKY 10 0 + 75.239 0.0 0.0 5.7145 5.7145 85.628 0.0 0.0 0.0 54.26985621489237 11.517412290202673 11.517412290202673 9.164539485499262 0 2.2302046884880937 1.3010299956639813 0.0 0.2302046884880938 + + EEVHD{I|L}ERKY;EEVHD{I|L}E[VG]KY;Y{[HG]|PP}HD{I|L}ERKY;Y{[HG]|PP}HD{I|L}E[VG]KY;[HV][KT]E{I|L}DHV[HC];[HD][{I|L}T]K{I|L}DHV[HC];EEVHD{I|L}K[HV][DP];[HV]{[ET]|[MV]}K{I|L}DHV[HC];Y{[HG]|PP}HD{I|L}K[HV][DP];EE[W{M(Oxidation (M))|F}][{I|L}V]RV[HC] 5.7145;5.0184;4.4977;3.8016;2.7941;2.656;2.4875;2.4274;2.2589;1.8375 +;-;-;-;-;-;-;-;-;- + 364 + 1 2.063 84665.2 0.6299999952316284 1397 3200 4598 DOHH2_400M_050219_2,4599 DOHH2_400M_050219_2,4599,EEVHDLERKY True True EEVHDLERKY 23.458307 659.324267566204 113471558.0 4598.0 ENST00000549988.5_1_12:76453547-76478450:-|nuORF;;nc|ENSG00000187109|P55209-3|NAP1L1;;nc|ENSG00000205531|Q99733-2|NAP1L4;;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;;ENSG00000187109|ENST00000618691|NAP1L1;;nc|ENSG00000187109|P55209-2|NAP1L1;;ENSG00000205531|ENST00000380542|NAP1L4 9.887487093607584 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4600 23.461 107.0 655990.0 25 0 91595.0 + 30467 READQPLRTY 10 67 416.8821286064024 1247.624556419407 3 416.8822814822197 MULTI CID FTMS 0 0 0 4598 484697.03125 0.6127032655454299 -5 0.0583724975585937 2 Unmodified _READQPLRTY_ ENSG00000145041|ENST00000684031|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;nc|ENSG00000145041|Q9Y4B6-3|DCAF1 37.250883937326 0.1865971120352015 2 {[RE]|[WV]}ADQ 5 5 35.942 0.0 0.0 2.8808 0.0 0.0 0.0 645.3343908757629 645.3343908757629 8.048312160122109 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.7302046884880937 + {[RE]|[WV]}ADQ 2.8808 + + 64 1 2.063 64956.5 1.0 1398 3200 4598 DOHH2_400M_050219_2,4600 DOHH2_400M_050219_2,4600,READQPLRTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4601 23.464 203.0 358060.0 25 0 55311.0 + 36942 TEVTGHRW 8 99 493.2461817266127 984.4778105200254 2 493.2464172244072 MULTI CID FTMS 0 0 0 4598 272334.71875 1.0 0 0.0 3 Unmodified _TEVTGHRW_ chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;ENSG00000172270|ENST00000333511|BSG;ENST00000576925.3_1_19:572634-579657:+|nuORF;nc|ENSG00000172270|P35613-2|BSG 36.12702656103203 0.299085846329477 2 {[ET]|[MV]}VTGH[WR] 8 0 + 46.348 0.0 0.0 4.7079 4.7079 72.846 0.0 0.0 0.0 1.6477441319891284 1.6477441319891284 1.6477441319891284 1.6477441319891284 0 1.3494850021680094 0.9208187539523752 0.0 0.0 + + {[ET]|[MV]}VTGH[WR];{[TV]|[{I|L}S]}E[QP]TV[DP];{[TV]|[{I|L}S]}E[PA]GTV[DP];{[ET]|[MV]}V[QP]TV[DP];{[ET]|[MV]}VTGH{[QD]|[EN]|[WG]|[KD]|[RS]}V;{[ET]|[MV]}V[PA]GTV[DP];{[ET]|[MV]}VTGY{[MG]|[TS]}K;{[ET]|[MV]}VT[QP][DP]V;{[ET]|[MV]}VTG[PA][DP]V;{[ET]|[MV]}VHH[YT]V 4.7079;4.5405;4.494;3.9012;3.896;3.8548;3.4301;2.9391;2.8927;1.9941 +;-;-;-;-;-;-;-;-;- + 320 + 1 2.063 60026.1 1.0 1399 3200 4598 DOHH2_400M_050219_2,4601 DOHH2_400M_050219_2,4601,TEVTGHRW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4602 23.469 220.0 607540.0 25 0 59022.0 -1 0 128 358.20697077552154 357.19969430892155 1 358.2061035037041 MULTI CID FTMS 0 0 0 4598 197316.4375 0.856409891241912 2 -0.0303459167480468 4 2 {I|L} 1 -1 10.278 0.0 0.0 2.8773 0.0 0.0 226.10487421790435 0.0 226.10487421790435 0.0 0.5236767526000641 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.8773 - 11 + 1 2.063 111177.7 1.0 1400 3200 4598 DOHH2_400M_050219_2,4602 DOHH2_400M_050219_2,4602, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4605 23.489 800.0 124890.0 25 0 28912.0 + -1 WEVCRHHAW 9 108 640.7921196467262 1279.5696863602525 2 640.7914916872978 MULTI CID FTMS 0 0 0 4604 60997.32421875 0.6312270515294022 -1 0.003976821899414 1 Carbamidomethyl (C) _WEVC(Carbamidomethyl (C))RHHAW_ REV__ENSG00000055609|ENST00000262189|KMT2C;REV__nc|ENSG00000055609|Q8NEZ4-2|KMT2C;REV__nc|ENSG00000055609|Q8NEZ4-3|KMT2C 14.838274106304384 0.4350285940865338 2 [{I|L}V]D 3 -1 19.666 0.0 0.0 1.5369 0.0 0.0 0.0 949.366933024568 949.366933024568 6.566818653688532 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}V]D 1.5369 - 90 1 2.063 78842.5 0.8199999928474426 1401 3202 4604 DOHH2_400M_050219_2,4605 DOHH2_400M_050219_2,4605,WEVCRHHAW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4606 23.502 800.0 283060.0 25 0 41103.0 + 7380 EGFPRRAV 8 177 466.25981882287545 930.5050847125508 2 466.2596008181572 MULTI CID FTMS 0 0 0 4604 162585.6875 0.6762946263823099 -12 0.2836818695068359 2 Unmodified _EGFPRRAV_ ENSG00000106009|ENST00000340611|BRAT1;ENST00000469750.5_1_7:2577705-2579570:-|nuORF;nc|ENSG00000106009|Q6PJG6-3|BRAT1 25.399314129420983 0.5099049743284904 2 VE 2 8 41.145 0.0 0.0 4.4218 0.0 0.0 0.0 699.369451289752 699.369451289752 25.788245576287267 0.0 0.0 0.0 0 0.1139829889124311 1.5228787452803376 0.3807196863200844 0.0 VE 4.4218 - 250 + 1 2.063 174462.2 0.8600000143051147 1402 3202 4604 DOHH2_400M_050219_2,4606 DOHH2_400M_050219_2,4606,EGFPRRAV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4608 23.519 800.0 104520.0 25 0 7599.6 + 8510 ETDRGMSAEY 10 124 579.7401984212288 1157.4658439092575 2 579.7401000857353 MULTI CID FTMS 0 0 0 4607 76282.1484375 0.0254787628610395 16 -0.4093589782714844 1 Unmodified _ETDRGMSAEY_ ENSG00000100347|ENST00000350028|SAMM50 27.628801355627647 0.3479284626772844 2 DAEY 4 6 43.276 0.0 0.0 3.7389 0.0 0.0 661.2880726544937 0.0 661.2880726544937 0.0 22.028937514676485 0.0 0.0 0 0.5 0.0 1.2614393726401687 0.0 DAEY 3.7389 - 196 1 2.063 67524.1 0.5400000214576721 1403 3203 4607 DOHH2_400M_050219_2,4608 DOHH2_400M_050219_2,4608,ETDRGMSAEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4610 23.523 12.0 4947800.0 25 0 860390.0 + 45447 YTDVSTRY 8 70 502.7378810610755 1003.461209188951 2 502.7378723025322 MULTI CID FTMS 0 0 0 4609 4793366.5 0.4984669128757272 8 -0.2049808502197265 1 Unmodified _YTDVSTRY_ ENSG00000213593|ENST00000278422|TMX2;ENST00000436507.2_1_9:37885847-37886384:+|nuORF;nc|ENSG00000213593|Q9Y320-2|TMX2 39.94969957227396 0.2351327405675156 2 YTDVS 5 3 66.454 0.0 0.0 6.6224 0.0 0.0 0.0 435.2013033502563 435.2013033502563 56.70432836127297 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + YTDVS 6.6224 + + 105 + 1 2.063 52234.9 1.0 1404 3204 4609 DOHH2_400M_050219_2,4610 DOHH2_400M_050219_2,4610,YTDVSTRY False True YTDVSTRY 23.523119 502.737872302532 170497296.0 4609.0 ENSG00000213593|ENST00000278422|TMX2;;nc|ENSG00000213593|Q9Y320-2|TMX2;;ENST00000436507.2_1_9:37885847-37886384:+|nuORF 7.101814111073812 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4611 23.537 768.0 109760.0 25 0 12571.0 + + 21379 LPKSSTQSL 9 123 480.77177588413 959.52899883506 2 480.7715331912041 MULTI CID FTMS 0 0 0 4609 92421.265625 0.6257274592494289 -4 0.0764045715332031 2 Unmodified _LPFSPSLSI_ ENST00000549648.5_1_16:699416-706047:+|nuORF;ENSG00000161996|ENST00000293879|WDR90;nc|ENSG00000161996|Q96KV7-3|WDR90;ENST00000552943.5_1_16:699416-703842:+|nuORF;nc|ENSG00000161996|Q96KV7-5|WDR90;ENST00000420061.6_1_16:699416-706047:+|nuORF 34.10243960390752 0.1078313939113124 2 {I|L}P[R{I|L}]{[{M(Oxidation (M))|F}D]|MM}S{I|L} 8 -1 + 46.86 0.0 0.0 4.8836 4.8836 86.736 0.0 0.0 0.0 20.406075122407685 10.138050198288012 10.138050198288012 20.35158431283704 0 0.6989700043360187 1.3010299956639813 0.3494850021680094 0.0 {I|L}P[R{I|L}]{[{M(Oxidation (M))|F}D]|MM}S{I|L};{I|L}{[ET]|[MV]}VW{I|L}S{I|L};{I|L}NK[QA]HH{I|L};{I|L}P[R{I|L}][HN]NP;{I|L}P[R{I|L}][HN]GGP 4.8836;2.7626;1.8368;1.4164;0.65312 -;-;-;-;- 278 + 1 2.063 67127.5 1.0 1405 3204 4609 DOHH2_400M_050219_2,4611 DOHH2_400M_050219_2,4611,LPFSPSLSI False False LPKSSTQSL 23.536755 480.771533191204 645101.875 4609.0 ENST00000549648.5_1_16:699416-706047:+|nuORF;;ENSG00000161996|ENST00000293879|WDR90;;nc|ENSG00000161996|Q96KV7-3|WDR90;;ENST00000552943.5_1_16:699416-703842:+|nuORF;;nc|ENSG00000161996|Q96KV7-5|WDR90;;ENST00000420061.6_1_16:699416-706047:+|nuORF 3.4231386184692383 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4612 23.545 490.0 293660.0 25 0 124960.0 -1 0 123 510.3271980577085 509.3199215911085 1 510.3269225955009 MULTI CID FTMS 0 0 0 4609 261939.78125 0.9247445225195726 -1 0.0161571502685546 3 2 TMK 3 -1 17.879 0.0 0.0 3.5105 0.0 0.0 131.12489703231785 0.0 131.12489703231785 0.0 4.780546455476145 0.0 0.0 0 0.0 0.0 0.0 0.5176452685714268 TMK 3.5105 - 43 + 1 2.063 115300.7 1.0 1406 3204 4609 DOHH2_400M_050219_2,4612 DOHH2_400M_050219_2,4612, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4614 23.557 544.0 222310.0 25 0 53869.0 + 11080 GEDVETSKKW 10 108 589.7884187685804 1177.5622846039607 2 589.7889282107353 MULTI CID FTMS 0 0 0 4613 118794.6328125 0.1423191952402381 11 -0.2988185882568359 1 Unmodified _GEDVETSKKW_ ENSG00000107223|ENST00000224073|EDF1;nc|ENSG00000107223|O60869-2|EDF1;nc|ENSG00000107223|O60869-3|EDF1 43.476825903602695 0.120852566744744 2 {[DA]|[EG]}DV{[MG]|[TS]}EKKW 10 2 + 79.887 0.0 0.0 6.7841 6.7841 83.009 0.0 0.0 0.0 59.25250945692483 12.64136888583522 12.64136888583522 3.4948500216800937 0 1.805462187404089 1.5228787452803376 1.1989700043360187 0.0 {[DA]|[EG]}DV{[MG]|[TS]}EKKW;{[DA]|[EG]}DVE{[MG]|[TS]}KKW;{[DA]|[EG]}DV[WM]KKW;{[DA]|[EG]}D{[WT]|[RM]}EKKW;[KS]TK{NN|[MP]|[D{I|L}]|[EV]}[WD]W;[KS]KT{NN|[MP]|[D{I|L}]|[EV]}[WD]W;KKST{NN|[MP]|[D{I|L}]|[EV]}[WD]W;[KS]TK[WE][DV]{[DA]|[EG]} 6.7841;6.4873;5.5719;5.5454;0.96955;0.71391;0.45827;0.18758 -;+;-;-;-;-;-;- + 379 + 1 2.063 94883.8 1.0 1407 3205 4613 DOHH2_400M_050219_2,4614 DOHH2_400M_050219_2,4614,GEDVETSKKW True True GEDVETSKKW 23.557258 589.788928210735 12919386.5 4613.0 ENSG00000107223|ENST00000224073|EDF1;;nc|ENSG00000107223|O60869-2|EDF1;;nc|ENSG00000107223|O60869-3|EDF1 8.763331413269043 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4615 23.563 310.0 246190.0 25 0 19763.0 + 525 AEHRKLTQL 9 99 365.879490200242 0 365.8803893923759 PEAK CID FTMS 0 0 0 4613 121207.15625 1.0 0 0.0 2 Unmodified _AEHRKLTQL_ REV__ENSG00000137877|ENST00000320955|SPTBN5 11.494710602746466 0.2951255534130184 2 R 1 -1 3.9794 0.0 0.0 0.54531 0.0 0.0 135.418236765308 435.1995638483032 570.6178006136112 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.54531 + + 7 + 1 2.063 66214.6 1.0 1408 3205 4613 DOHH2_400M_050219_2,4615 DOHH2_400M_050219_2,4615,AEHRKLTQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4616 23.565 121.0 734490.0 25 0 223730.0 + 39815 VETTQLGN 8 56 431.2202923902948 0 431.2203857302666 PEAK CID FTMS 0 0 0 4613 269987.71875 0.9887340984240304 1 -0.0199756622314453 3 Unmodified _VETTQLGN_ REV__nc|ENSG00000164929|Q8WXS3-3|BAALC 5.230669730166228 0.5807325378471833 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.063 77515.5 1.0 1409 3205 4613 DOHH2_400M_050219_2,4616 DOHH2_400M_050219_2,4616,VETTQLGN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4618 23.57 85.0 656570.0 25 0 40186.0 -1 SIESVASCL 9 95 483.2328610774199 964.4511692216398 2 483.2326537966728 MULTI CID FTMS 0 0 0 4617 594827.375 0.4060926974181138 10 -0.2788429260253906 1 Carbamidomethyl (C) _SIESVASC(Carbamidomethyl (C))L_ ENSG00000235718|ENST00000619721|MFRP;nc|ENSG00000235718|Q9BY79-2|MFRP 16.942295170755138 0.3780752226737986 2 ATVGQY 6 -1 26.89 0.0 0.0 2.7881 0.0 0.0 327.14210047339606 0.0 327.14210047339606 0.0 16.51100739637514 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.5 ATVGQY 2.7881 - 222 + 1 2.063 47039.8 1.0 1410 3206 4617 DOHH2_400M_050219_2,4618 DOHH2_400M_050219_2,4618,SIESVASCL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4619 23.573 136.0 393400.0 25 0 26355.0 8032 ENHLFAPEI 9 97 535.2673496785488 1068.5201464238976 2 535.2679931521416 MULTI CID FTMS 0 0 0 4617 311277.09375 0.3811246100126035 11 -0.2993526458740234 2 Unmodified _ENHLFAPEI_ ENSG00000182674|ENST00000523207|KCNB2 25.399314129420983 0.2080152500878129 2 A{I|L} 2 7 19.38 0.0 0.0 1.8138 0.0 0.0 866.3886442039742 0.0 866.3886442039742 0.0 2.870156338638594 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 A{I|L} 1.8138 - 77 + 1 2.063 46462.1 1.0 1411 3206 4617 DOHH2_400M_050219_2,4619 DOHH2_400M_050219_2,4619,ENHLFAPEI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4621 23.579 205.0 431050.0 25 0 144900.0 + 45782 REAPERPSL 9 77 527.7857043539088 1053.5568557746176 2 527.7856933474541 MULTI CID FTMS 0 0 0 4620 334721.40625 0.8557316991232554 4 -0.1469573974609375 1 Unmodified _YYKQRLSP_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000489266.5_1_10:123734227-123734680:-|nuORF;nc|ENSG00000107672|Q9NXX6-2|NSMCE4A 21.74664581756881 0.5868176546531598 2 [VG]EA[EP]R{I|L}[PS] 10 6 + 36.422 0.0 0.0 3.457 3.457 72.776 0.0 0.0 0.0 13.502116082318103 2.9217443166776818 2.9217443166776818 4.960762528683709 0 1.3807196863200843 1.3979400086720375 0.3494850021680094 0.0 [VG]EA[EP]R{I|L}[PS];{I|L}[DG]A[EP]R{I|L}[PS];{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[EP]R{I|L}[PS];REA[EP][VG]{I|L}[PS];[VG]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[HG]|PP}{I|L}[PS] 3.457;2.9862;2.4577;2.1301;1.4057 -;-;-;-;- 99 + 1 2.063 73362.4 1.0 1412 3207 4620 DOHH2_400M_050219_2,4621 DOHH2_400M_050219_2,4621,YYKQRLSP False False REAPERPSL 23.578835 527.785693347454 5338261.0 4620.0 ENSG00000107672|ENST00000369023|NSMCE4A;;ENST00000489266.5_1_10:123734227-123734680:-|nuORF;;nc|ENSG00000107672|Q9NXX6-2|NSMCE4A 6.6773444811503095 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4622 23.583 229.0 317630.0 25 0 99332.0 28020 PNAKKRHG 8 76 454.26355017869673 0 454.2644836306572 PEAK CID FTMS 0 0 0 4620 228646.625 0.9110488404121272 -1 0.0072593688964843 2 Unmodified _PNAKKRHG_ ENSG00000143479|ENST00000367109|DYRK3;nc|ENSG00000143479|O43781-2|DYRK3 5.760428011301431 0.5786759180849727 2 N 1 7 2.2185 0.0 0.0 0.24473 0.0 0.0 723.4459255753638 65.99937616519765 789.4453017405615 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + N 0.24473 + + 10 + 1 2.063 61433.5 1.0 1413 3207 4620 DOHH2_400M_050219_2,4622 DOHH2_400M_050219_2,4622,PNAKKRHG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4623 23.585 91.0 681080.0 25 0 51974.0 + 29117 QERPSVTSY 9 109 533.7614222321193 1065.5082915310386 2 533.7607299685478 MULTI CID FTMS 0 0 0 4620 417465.71875 0.1354134939193537 -4 0.0702056884765625 3 Unmodified _QERPSVTSY_ ENSG00000196510|ENST00000455511|ANAPC7;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 45.69961567697781 0.0497987121815769 2 [HM]TY[RV]PY 8 7 + 53.065 0.0 0.0 4.9802 4.9802 73.636 0.0 0.0 0.0 1.2943831468606604 1.2943831468606604 1.2943831468606604 1.2943831468606604 0 1.0 0.0 0.4247425010840047 0.6421590589602533 [HM]TY[RV]PY;{[QN]|[E{I|L}]|[KN]}[YK]YTSY;[HM]TV[YR]PY;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]VTSY;{[QN]|[E{I|L}]|[KN]}[NG][PS]VTSY;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RV]ESY;[R{M(Oxidation (M))|F}][QT][HK]SY;[VG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RP]ESY;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]VGMY;{[QS]|[NT]}[RD][{I|L}P]TSY 4.9802;4.8588;4.4978;4.0153;3.2684;3.0181;2.8272;2.7356;2.4171;2.3662 -;-;-;-;-;-;-;-;-;- 407 + 1 2.063 51351.2 1.0 1414 3207 4620 DOHH2_400M_050219_2,4623 DOHH2_400M_050219_2,4623,QERPSVTSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4624 23.599 800.0 234350.0 25 0 19245.0 26884 PDFHTIPAF 9 147 522.7630010835476 1043.511449233895 2 522.7632934451103 MULTI CID FTMS 0 0 0 4620 136380.4375 0.2905470775351618 -5 0.100107192993164 4 Unmodified _PDFHTIPAF_ ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10;nc|ENSG00000155090|Q13118-3|KLF10;nc|ENSG00000155090|Q13118-4|KLF10 30.22481116460888 0.1466181017706357 2 EE[YT]RH 6 8 39.173 0.0 0.0 3.7539 0.0 0.0 0.0 225.12034428600103 225.12034428600103 -0.9034122746594022 0.0 -0.9034122746594022 0.0 0 0.8807196863200843 1.5228787452803376 0.6747425010840047 0.3494850021680094 EE[YT]RH 3.7539 - 1374 1 2.063 147992.8 0.5899999737739563 1415 3207 4620 DOHH2_400M_050219_2,4624 DOHH2_400M_050219_2,4624,PDFHTIPAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4625 23.607 465.0 137520.0 25 0 6624.8 + 6711 EDEDAYKKQF 10 95 424.8627810747119 0 424.8627502322197 PEAK CID FTMS 0 0 0 4620 107628.6640625 1.0 0 0.0 5 Unmodified _EDEDAYKKQF_ ENSG00000122406|ENST00000370321|RPL5;ENST00000434805.1_1_1:35816564-35817152:+|nuORF 38.17557092003332 0.1299896074792053 2 AYK 3 7 12.792 0.0 0.0 1.509 0.0 0.0 64.2816244884868 418.2092074029906 482.4908318914775 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + AYK 1.509 + + 36 + 1 2.063 60688.8 1.0 1416 3207 4620 DOHH2_400M_050219_2,4625 DOHH2_400M_050219_2,4625,EDEDAYKKQF False True EDEDAYKKQF 23.6072 424.86275023222 495639.84375 4620.0 ENST00000434805.1_1_1:35816564-35817152:+|nuORF;;ENSG00000122406|ENST00000370321|RPL5 6.256368001302083 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4626 23.611 210.0 397520.0 25 0 140560.0 -1 0 91 474.29046360393954 473.2831871373396 1 474.2887756228447 MULTI CID FTMS 0 0 0 4620 216934.359375 0.3659022403851232 18 -0.4863262176513672 6 2 {NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]} 4 -1 + 20.458 0.0 0.0 4.3225 4.3225 78.257 0.0 0.0 0.0 2.374694260092188 -1.593793813122062 -1.593793813122062 7.781512503836435 0 0.0 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}T][Q{I|L}] 4.3225;2.6783 -;- 36 1 2.063 68308.2 1.0 1417 3207 4620 DOHH2_400M_050219_2,4626 DOHH2_400M_050219_2,4626, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4627 23.621 565.0 181170.0 25 0 9480.6 + 33008 SENPAKRLY 9 140 539.2880694734374 1076.5615860136747 2 539.2879516482353 MULTI CID FTMS 0 0 0 4620 140664.78125 1.0 0 0.0 7 Unmodified _SENPAKRLY_ ENSG00000071462|ENST00000265758|BUD23;ENST00000432522.5_1_7:73101195-73108381:+|nuORF;ENST00000463307.5_1_7:73097949-73107126:+|nuORF;ENST00000496153.5_1_7:73097949-73108381:+|nuORF;nc|ENSG00000071462|O43709-2|BUD23;nc|ENSG00000071462|O43709-3|BUD23 52.268347100219714 0.0353964759249114 2 {[ES]|[DT]|[{I|L}C]}NPAKR{I|L}Y 9 0 + 53.744 0.0 0.0 4.9922 4.9922 83.556 0.0 0.0 0.0 7.147642715192504 12.04119982655925 7.147642715192504 9.208187539523747 0 0.8807196863200843 0.0 0.0 0.7134679910804405 + + {[ES]|[DT]|[{I|L}C]}NPAKR{I|L}Y;{[ES]|[DT]|[{I|L}C]}GGPAKR{I|L}Y;{[ES]|[DT]|[{I|L}C]}NPAKRY{I|L};{[ES]|[DT]|[{I|L}C]}GGPAKRY{I|L} 4.9922;4.1368;3.8737;3.0183 +;-;-;- + 640 + 1 2.063 82819.5 1.0 1418 3207 4620 DOHH2_400M_050219_2,4627 DOHH2_400M_050219_2,4627,SENPAKRLY True True SENPAKRLY 23.621098 539.287951648235 2077196.375 4620.0 ENST00000432522.5_1_7:73101195-73108381:+|nuORF;;ENST00000463307.5_1_7:73097949-73107126:+|nuORF;;ENST00000496153.5_1_7:73097949-73108381:+|nuORF;;nc|ENSG00000071462|O43709-2|BUD23;;ENSG00000071462|ENST00000265758|BUD23;;nc|ENSG00000071462|O43709-3|BUD23 6.63481871287028 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4628 23.627 312.0 329410.0 25 0 81941.0 + 15868 ISPKFQLFF 9 123 376.21350257315424 0 376.2137328982353 PEAK CID FTMS 0 0 0 4620 119162.03125 0.8898533750071613 -1 0.0072593688964843 8 Unmodified _ISPKFQLFF_ REV__ENST00000266604.6_1_12:66517251-66517542:-|nuORF 4.75600775471527 0.3444685223463735 2 D 1 -1 3.9794 0.0 0.0 0.5303 0.0 0.0 550.2961630058804 82.06687341861561 632.363036424496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.5303 - 6 + 1 2.063 85048.9 1.0 1419 3207 4620 DOHH2_400M_050219_2,4628 DOHH2_400M_050219_2,4628,ISPKFQLFF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4630 23.633 150.0 505730.0 25 0 137420.0 + 30466 READQPLRTY 10 63 624.8202521596013 1247.6259513860025 2 624.8200561404228 MULTI CID FTMS 0 0 0 4629 441413.09375 0.5115226429546915 4 -0.0968303680419921 1 Unmodified _READQPLRTY_ ENSG00000145041|ENST00000684031|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1;nc|ENSG00000145041|Q9Y4B6-3|DCAF1 21.2413784809298 0.4911323115084531 2 [VG][WE]Q 5 9 32.051 0.0 0.0 2.569 0.0 0.0 0.0 645.3375948541624 645.3375948541624 20.061668675368622 0.0 0.0 0.0 0 1.274227503252014 1.3979400086720375 0.0 0.4247425010840047 [VG][WE]Q 2.569 - 15 + 1 2.063 65269.8 1.0 1420 3208 4629 DOHH2_400M_050219_2,4630 DOHH2_400M_050219_2,4630,READQPLRTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4631 23.647 800.0 54785.0 25 0 6234.6 -1 0 52 870.6110683704478 4348.018959519239 5 871.2119628787041 MULTI CID FTMS 0 0 0 4629 69168.5546875 0.7769792310871202 3 -0.0928554534912109 2 2 HT 2 -1 7.0783 0.0 0.0 0.16279 0.0 0.0 3166.468130517089 940.4237154596312 4106.89184597672 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HT 0.16279 - 16 + 1 2.063 40263.5 0.5 1421 3208 4629 DOHH2_400M_050219_2,4631 DOHH2_400M_050219_2,4631, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4632 23.65 191.0 488860.0 25 0 41244.0 + 6977 EEIKKETGF 9 113 540.7823948765584 1079.5502368199168 2 540.7820312380791 MULTI CID FTMS 0 0 0 4629 216470.203125 0.108271264164731 -5 0.124307632446289 3 Unmodified _EEIKKETGF_ ENSG00000187446|ENST00000334660|CHP1 60.07390631473393 0.0260411565414776 2 {[ET]|[MV]}KKG{I|L}{M(Oxidation (M))|F}EE 9 7 + 37.563 0.0 0.0 3.4795 3.4795 72.099 0.0 0.0 0.0 4.963352341680476 13.310924976981376 4.963352341680476 4.259687322722812 0 0.0 0.0 0.805462187404089 0.0 {[ET]|[MV]}KKG{I|L}{M(Oxidation (M))|F}EE;{[ET]|[MV]}KGK{I|L}{M(Oxidation (M))|F}EE;{[ET]|[MV]}KKG{M(Oxidation (M))|F}{I|L}EE;{[ET]|[MV]}KKG{I|L}EE{M(Oxidation (M))|F};KKETG{I|L}{M(Oxidation (M))|F}EE;{[ET]|[MV]}KGK{M(Oxidation (M))|F}{I|L}EE;{[ET]|[MV]}KG{M(Oxidation (M))|F}K{I|L}EE;{[ET]|[MV]}KGK{I|L}EE{M(Oxidation (M))|F};{[ET]|[MV]}KG[RH]{I|L}[HC];KKETG{M(Oxidation (M))|F}{I|L}EE 3.4795;3.085;2.8321;2.6318;2.5769;2.4375;2.4008;2.2372;1.9856;1.9294 -;-;-;-;-;-;-;-;-;- 662 1 2.063 73806.7 1.0 1422 3208 4629 DOHH2_400M_050219_2,4632 DOHH2_400M_050219_2,4632,EEIKKETGF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4633 23.664 800.0 271440.0 25 0 27552.0 + 9438 FLARKPSAV 9 158 494.8005821556183 987.5866113780368 2 494.8002502322197 MULTI CID FTMS 0 0 0 4629 131114.09375 0.4139883049429441 -3 0.0813369750976562 4 Unmodified _FLARKPSAV_ ENST00000312037.5_1_5:149826506-149829126:-|nuORF;ENST00000407193.5_1_5:149826506-149829126:-|nuORF 62.57269311338072 0.0246576765497938 2 {M(Oxidation (M))|F}{I|L}ARK[PS]AV 9 0 + 41.824 0.0 0.0 4.235 4.235 74.114 0.0 0.0 0.0 3.928768455400501 3.928768455400501 3.928768455400501 3.928768455400501 0 1.7231975075880328 0.0 0.3494850021680094 0.3807196863200844 + + {M(Oxidation (M))|F}{I|L}ARK[PS]AV;[PA]SKRA{I|L}{M(Oxidation (M))|F}V;{M(Oxidation (M))|F}{I|L}ARK{[TV]|[{I|L}S]}GP;[PS]AKRA{I|L}{M(Oxidation (M))|F}V;{M(Oxidation (M))|F}{I|L}ARK{[SA]|[TG]}PV;{M(Oxidation (M))|F}{I|L}ARK[PS]G{I|L};[PG]TKRA{I|L}{M(Oxidation (M))|F}V;{[SA]|[TG]}PKRA{I|L}{M(Oxidation (M))|F}V;[PA]SKR{I|L}A{M(Oxidation (M))|F}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ARK[KP]E 4.235;3.8372;3.6676;3.5315;3.2812;3.2535;2.7728;2.749;2.5372;2.4969 +;-;-;-;-;-;-;-;-;- + 903 + 1 2.063 165083.2 0.5600000023841858 1423 3208 4629 DOHH2_400M_050219_2,4633 DOHH2_400M_050219_2,4633,FLARKPSAV True True FLARKPSAV 23.664202 494.80025023222 1147483.5 4629.0 ENST00000407193.5_1_5:149826506-149829126:-|nuORF;;ENST00000312037.5_1_5:149826506-149829126:-|nuORF 4.722689072291057 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4634 23.678 800.0 83032.0 25 0 5680.0 + 37813 TLSWYCLEMY 10 100 654.7867498202207 1307.5589467072414 2 655.2861205935478 MULTI CID FTMS 0 0 0 4629 103362.1953125 1.0 0 0.0 5 Unmodified _TLSWYCLEMY_ REV__ENST00000517845.5_2_8:126091002-126094647:-|nuORF 10.073929032068715 0.6785112666868882 2 [VP]E{[QV]|[N{I|L}]|[RA]|[KV]}C[NP]E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 11 -1 + 25.59 0.0 0.0 1.9571 1.9571 70.761 0.0 0.0 0.0 4.119322137208567 14.330806929464403 4.119322137208567 5.659299004136567 0 0.0 0.0 0.2614393726401688 0.8494850021680094 [VP]E{[QV]|[N{I|L}]|[RA]|[KV]}C[NP]E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[PG]G{[NV]|[RG]}KC[NP]E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[HV]{[MG]|[TS]}KC[NP]E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[NP]{[NV]|[RG]}KC[NP]E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[VP]E[MT]P[DP]E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 1.9571;1.5243;1.4966;1.3922;0.59776 -;-;-;-;- 160 1 2.063 56503.6 0.5600000023841858 1424 3208 4629 DOHH2_400M_050219_2,4634 DOHH2_400M_050219_2,4634,TLSWYCLEMY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4635 23.686 472.0 387760.0 25 0 37164.0 + 9591 FLKQRPTKL 9 164 377.57272609062 1129.69634887206 3 377.5724975466728 MULTI CID FTMS 0 0 0 4629 95039.03125 0.3931781102919745 -2 0.0613613128662109 6 Unmodified _FLKQRPTKL_ ENSG00000089127|ENST00000202917|OAS1;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1 46.0223103267499 0.0490911897871712 2 {M(Oxidation (M))|F}{I|L}KQR[TP]K{I|L} 9 0 + 44.031 0.0 0.0 3.8976 3.8976 72.833 0.0 0.0 0.0 27.124431554101 4.829562535018042 4.829562535018042 3.7628749457997657 0 0.6549471895720984 0.0 0.3252574989159953 1.1989700043360187 + + {M(Oxidation (M))|F}{I|L}KQR[TP]K{I|L};{I|L}{M(Oxidation (M))|F}KQR[TP]K{I|L};{M(Oxidation (M))|F}{I|L}K[AG]R[TP]K{I|L};{M(Oxidation (M))|F}{I|L}{I|L}[W{I|L}][TP]K{I|L};{I|L}{M(Oxidation (M))|F}K[AG]R[TP]K{I|L};{I|L}{M(Oxidation (M))|F}{I|L}[W{I|L}][TP]K{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[R{I|L}]RA{I|L}{I|L}E;[KT][KS]RR{I|L}{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[R{I|L}]RA{I|L}E{I|L};[KT][KS]RR{I|L}E{I|L} 3.8976;3.5645;3.0825;3.0384;2.7494;2.7053;1.9742;1.5118;1.3357;0.87329 +;-;-;-;-;-;-;-;-;- + 290 + 1 2.063 147551.9 1.0 1425 3208 4629 DOHH2_400M_050219_2,4635 DOHH2_400M_050219_2,4635,FLKQRPTKL True True FLKQRPTKL 23.686385 377.572497546673 960635.9375 4629.0 ENSG00000089127|ENST00000202917|OAS1;;nc|ENSG00000089127|P00973-2|OAS1;;nc|ENSG00000089127|P00973-3|OAS1;;nc|ENSG00000089127|P00973-4|OAS1 2.515406370162964 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4637 23.694 206.0 346350.0 25 0 19453.0 + 6514 EAKQRLQQL 9 98 557.3225621088783 1112.6305712845565 2 557.3222534060478 MULTI CID FTMS 0 0 0 4636 410840.125 0.1801578353878661 5 -0.0888099670410156 1 Unmodified _EAKQRLQQL_ ENSG00000196683|ENST00000358435|TOMM7;ENST00000463284.2_1_7:22852718-22862419:-|nuORF;ENST00000496129.1_1_7:22857608-22862419:-|nuORF 79.59630418116434 0.0176145593575188 2 EAKQ[R{I|L}]QQ{I|L} 9 0 + 75.358 0.0 0.0 6.773 6.773 89.889 0.0 0.0 0.0 41.17599686953518 15.98689918391166 15.98689918391166 9.208187539523747 0 1.666386562212267 1.3010299956639813 0.0 1.1861818737241734 + + EAKQ[R{I|L}]QQ{I|L};EAK[AG][R{I|L}]QQ{I|L};EAKQ[R{I|L}][AG]Q{I|L};EAKQ[R{I|L}]Q[AG]{I|L};EAKQ[R{I|L}][KS][PG];[Q{I|L}]QS[R{I|L}]QQ{I|L};[Q{I|L}][AG]S[R{I|L}]QQ{I|L};[Q{I|L}]QS[R{I|L}][AG]Q{I|L};[Q{I|L}]QS[R{I|L}]Q[AG]{I|L};{[CP]|[EA]}KQ[R{I|L}]QQ{I|L} 6.773;5.9454;5.9454;5.5636;3.5397;3.3377;2.5101;2.5101;2.5101;2.4566 +;-;-;-;-;-;-;-;-;+ + 211 + 1 2.055 57765.2 1.0 1426 3209 4636 DOHH2_400M_050219_2,4637 DOHH2_400M_050219_2,4637,EAKQRLQQL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4638 23.696 87.0 784070.0 25 0 59825.0 + 10650 FVQLCPYKGQG 11 86 620.3132283273969 1238.6119037215938 2 620.3132812380791 MULTI CID FTMS 0 0 0 4636 748651.0625 1.0 0 0.0 2 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 2 {[HG]|PP}AMPPPPPPQN 12 -1 {[HG]|PP}AM + + 82.402 11.427 2.8842 6.6528 6.6528 61.562 0.0 0.0 0.0 0.0 60.842896387659664 0.0 0.0 0 2.774227503252014 0.0 0.0 2.078340932684427 {[HG]|PP}AMPPPPPPQN 6.6528 - 2648 + 1 2.055 55202.8 1.0 1427 3209 4636 DOHH2_400M_050219_2,4638 DOHH2_400M_050219_2,4638,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4639 23.699 168.0 493120.0 25 0 93693.0 5831 DPSILELFF 9 104 360.8574934448998 1079.5506509348993 3 360.8568908572197 MULTI CID FTMS 0 0 0 4636 272715.8125 0.4685646989744084 -2 0.1136837005615234 3 Unmodified _DPSILELFF_ ENSG00000164142|ENST00000435205|FHIP1A 12.531546534597751 0.4974689918368763 2 [DP][KG]K{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 9 3 [DP][KG]K{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} + + 15.485 0.5513 0.060287 1.4344 1.4344 47.047 0.0 0.0 0.0 0.0 -5.109849771020482 -5.109849771020482 0.0 0 0.0 0.0 0.0 0.0 [DP][KG]K{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.4344 - 166 + 1 2.055 70701.8 1.0 1428 3209 4636 DOHH2_400M_050219_2,4639 DOHH2_400M_050219_2,4639,DPSILELFF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4640 23.704 284.0 263760.0 25 0 46611.0 + 29021 QEDRPGLHAY 10 99 395.8601579178649 1184.5586443537948 3 395.8592101931572 MULTI CID FTMS 0 0 0 4636 166042.484375 0.105842962937111 13 -0.2778854370117187 4 Unmodified _QEDRPGLHAY_ ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1 15.248480904072842 0.5916873121453583 2 AY 2 8 14.693 0.0 0.0 1.2404 0.0 0.0 932.4479093457854 0.0 932.4479093457854 0.0 3.272754322738028 0.0 0.0 0 0.0 0.0 0.0 0.0 + AY 1.2404 + + 182 + 1 2.055 63951.3 1.0 1429 3209 4636 DOHH2_400M_050219_2,4640 DOHH2_400M_050219_2,4640,QEDRPGLHAY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4642 23.712 290.0 245340.0 25 0 25614.0 + 5140 DIIERHNTM 9 100 564.7767342797341 1127.538915626268 2 564.7781249880791 MULTI CID FTMS 0 0 0 4641 186250.625 0.6261944671911973 -3 0.1316146850585937 1 Unmodified _DIIERHNTM_ ENSG00000137936|ENST00000260502|BCAR3;nc|ENSG00000137936|O75815-2|BCAR3;nc|ENSG00000137936|O75815-3|BCAR3 40.72490554402381 0.0714771638475563 2 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{[MS]|[{M(Oxidation (M))|F}A]}NTM 10 4 + 37.681 0.0 0.0 3.3419 3.3419 82.531 0.0 0.0 0.0 4.700367766225568 13.728721920568248 4.700367766225568 34.17349402358865 0 0.8807196863200843 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{[MS]|[{M(Oxidation (M))|F}A]}NTM;{[{M(Oxidation (M))|F}C]|[YS]}NHR[QP]{[QV]|[N{I|L}]|[RA]|[KV]} 3.3419;0.31109 -;- 105 1 2.055 58890.1 1.0 1430 3210 4641 DOHH2_400M_050219_2,4642 DOHH2_400M_050219_2,4642,DIIERHNTM True True DIIERHNTM 23.711864 564.778124988079 2411935.125 4641.0 nc|ENSG00000137936|O75815-2|BCAR3;;ENSG00000137936|ENST00000260502|BCAR3;;nc|ENSG00000137936|O75815-3|BCAR3 5.341944694519043 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4643 23.72 438.0 276260.0 25 0 27076.0 + 11106 GEFQTQHSY 9 133 548.7387046586608 1095.4628563841216 2 548.7386352419853 MULTI CID FTMS 0 0 0 4641 191258.28125 0.4674942484274503 -3 0.1316146850585937 2 Unmodified _GEFQTQHSY_ ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11 99.79894945604345 0.0109923542231827 2 {[DA]|[EG]}{M(Oxidation (M))|F}QTQHSY 9 0 + 92.309 0.0 0.0 8.4265 8.4265 92.973 0.0 0.0 0.0 38.68388670184705 12.98332479720628 12.98332479720628 9.208187539523747 0 0.8494850021680094 1.6989700043360187 1.829689690656103 1.16944517631652 + + {[DA]|[EG]}{M(Oxidation (M))|F}QTQHSY;{[DA]|[EG]}{M(Oxidation (M))|F}[AG]TQHSY;{[DA]|[EG]}{M(Oxidation (M))|F}QT[AG]HSY;{[DA]|[EG]}{M(Oxidation (M))|F}[AG]T[AG]HSY;{[CT]|[{M(Oxidation (M))|F}G]}EQTQHSY;{[DA]|[EG]}N[YV]QHSY;[HM]HQTQEW;{[DA]|[EG]}{M(Oxidation (M))|F}QT[TP]MW;{[CT]|[{M(Oxidation (M))|F}G]}E[AG]TQHSY;{[DA]|[EG]}GG[YV]QHSY 8.4265;7.5859;7.3223;5.6818;5.6594;5.5307;5.1303;5.1197;4.8188;4.6901 +;-;-;-;-;-;-;-;-;- + 2645 + 1 2.055 96544.6 1.0 1431 3210 4641 DOHH2_400M_050219_2,4643 DOHH2_400M_050219_2,4643,GEFQTQHSY True True GEFQTQHSY 23.719654 548.738635241985 2196747.75 4641.0 ENSG00000104133|ENST00000261866|SPG11;;nc|ENSG00000104133|Q96JI7-3|SPG11;;nc|ENSG00000104133|Q96JI7-2|SPG11 8.938115119934082 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4646 23.738 670.0 301480.0 25 0 136400.0 19178 LEELPLEP 8 130 470.2560303897932 0 470.2566711306572 PEAK CID FTMS 0 0 0 4645 212201.859375 0.3947098451179672 9 -0.2057514190673828 1 Unmodified _LEELPLEP_ ENST00000348159.8_1_1:156453152-156470609:-|nuORF 13.50788311687929 0.5021269579892848 2 D 1 8 4.5615 0.0 0.0 0.48604 0.0 0.0 724.3653494985333 96.08252893619374 820.447878434727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1462566630072955 0.0 D 0.48604 - 53 + 1 2.055 158775.4 1.0 1432 3212 4645 DOHH2_400M_050219_2,4646 DOHH2_400M_050219_2,4646,LEELPLEP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4647 23.745 439.0 407010.0 25 0 30181.0 + 5141 DIIERHNTM 9 165 376.8538371724568 1127.5396821175702 3 376.8533813357353 MULTI CID FTMS 0 0 0 4645 250911.78125 1.0 0 0.0 2 Unmodified _DIIERHNTM_ ENSG00000137936|ENST00000260502|BCAR3;nc|ENSG00000137936|O75815-2|BCAR3;nc|ENSG00000137936|O75815-3|BCAR3 29.081581746732265 0.1611639662936252 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}E 4 5 31.643 0.0 0.0 2.8064 0.0 0.0 0.0 654.2797761634665 654.2797761634665 10.95953841495108 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.3807196863200844 0.0 + {NN|[MP]|[D{I|L}]|[EV]}{I|L}E 2.8064 + + 484 + 1 2.055 140949.0 1.0 1433 3212 4645 DOHH2_400M_050219_2,4647 DOHH2_400M_050219_2,4647,DIIERHNTM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4648 23.759 800.0 257420.0 25 0 22761.0 5135 DIHRTFPA 8 138 478.7531787990668 955.4918046649336 2 478.7531921267509 MULTI CID FTMS 0 0 0 4645 124769.6484375 0.4716779936617027 -5 0.1509323120117187 3 Unmodified _DIHRTFPA_ ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L 26.34127834903884 0.4900704351052977 2 {M(Oxidation (M))|F}HEVM 5 7 39.979 0.0 0.0 4.1842 0.0 0.0 294.1945766740974 0.0 294.1945766740974 0.0 23.028871982441355 0.0 0.0 0 0.9802046884880936 0.0 0.0 0.0 {M(Oxidation (M))|F}HEVM 4.1842 - 264 1 2.055 159014.0 0.8199999928474426 1434 3212 4645 DOHH2_400M_050219_2,4648 DOHH2_400M_050219_2,4648,DIHRTFPA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4650 23.767 208.0 344890.0 25 0 58462.0 + 39661 VEDLTKGLG 9 101 466.25981882287545 930.5050847125508 2 466.2598144412041 MULTI CID FTMS 0 0 0 4649 230981.15625 0.9607937646261002 -1 0.0355358123779296 1 Unmodified _VEDLTKGLG_ REV__ENSG00000165458|ENST00000298229|INPPL1;REV__nc|ENSG00000165458|O15357-2|INPPL1 10.073929032068715 0.563993802247229 2 GY 2 -1 14.693 0.0 0.0 1.579 0.0 0.0 692.4098068578619 0.0 692.4098068578619 0.0 0.5237875363565756 0.0 0.0 0 0.0 0.0 0.0 0.0 GY 1.579 - 48 + 1 2.052 60619.7 1.0 1435 3213 4649 DOHH2_400M_050219_2,4650 DOHH2_400M_050219_2,4650,VEDLTKGLG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4651 23.775 477.0 128020.0 25 0 17419.0 2215 AQCCLNFGWAF 11 100 630.2681243741041 1258.521695815008 2 630.2690917849541 MULTI CID FTMS 0 0 0 4649 154685.15625 0.5651977468478615 -8 0.2137031555175781 2 Unmodified _AQCCLNFGWAF_ ENSG00000214700|ENST00000429849|C12orf71 17.11289562659939 0.6791789249425932 2 [AG]AHDEAQENA{M(Oxidation (M))|F} 12 9 + 70.033 0.0 0.0 5.5647 5.5647 81.011 0.0 0.0 0.0 5.7219447673672335 15.106664456146277 5.7219447673672335 5.7219447673672335 0 0.5 1.3010299956639813 0.3807196863200844 0.4247425010840047 [AG]AHDEAQENA{M(Oxidation (M))|F};[QA]HDEAQENA{M(Oxidation (M))|F};[AG]AHDEAQQDA{M(Oxidation (M))|F};[HD][QA]EAQENA{M(Oxidation (M))|F};[AG]D[HA]EAQENA{M(Oxidation (M))|F};[AG]AHDEA[AG]ENA{M(Oxidation (M))|F};[AG]AHDEAQEGGA{M(Oxidation (M))|F};[QA]HDEAQQDA{M(Oxidation (M))|F};[HD]{[CP]|[EA]}QAQENA{M(Oxidation (M))|F};[HD][QA]EAQQDA{M(Oxidation (M))|F} 5.5647;5.11;5.0863;5.0232;4.9018;4.8417;4.8417;4.6316;4.5448;4.5448 -;-;-;-;-;-;-;-;-;- 780 1 2.052 50341.5 1.0 1436 3213 4649 DOHH2_400M_050219_2,4651 DOHH2_400M_050219_2,4651,AQCCLNFGWAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4653 23.78 111.0 593190.0 25 0 84321.0 + 45448 YTDVSTRY 8 84 502.7378810610755 1003.461209188951 2 502.7374145388603 MULTI CID FTMS 0 0 0 4652 319999.84375 0.0332770995572271 18 -0.6367950439453125 1 Unmodified _YTDVSTRY_ ENSG00000213593|ENST00000278422|TMX2;ENST00000436507.2_1_9:37885847-37886384:+|nuORF;nc|ENSG00000213593|Q9Y320-2|TMX2 32.78568957990786 0.3549862272178655 2 YTDVS 5 3 55.222 0.0 0.0 5.5031 0.0 0.0 0.0 435.1989840143188 435.1989840143188 43.43887296943633 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + YTDVS 5.5031 + + 109 + 1 2.052 55388.1 1.0 1437 3214 4652 DOHH2_400M_050219_2,4653 DOHH2_400M_050219_2,4653,YTDVSTRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4654 23.788 473.0 237890.0 25 0 55952.0 + 6033 DSDRGLQEGY 10 115 570.2514833211062 1138.4884137090123 2 570.2505981326103 MULTI CID FTMS 0 0 0 4652 151525.515625 0.2569515196960343 -4 0.0708789825439453 2 Unmodified _DSDRGLQEGY_ ENSG00000175931|ENST00000319380|UBE2O 43.9818466556824 0.1155196613165264 2 [AG]E{[ES]|[DT]|[{I|L}C]}G{I|L}QEGY 11 4 + 63.994 0.0 0.0 5.6209 5.6209 77.806 0.0 0.0 0.0 2.684812840637939 4.915314452042487 2.684812840637939 2.684812840637939 0 1.3494850021680094 1.154901959985743 0.0 0.7302046884880937 [AG]E{[ES]|[DT]|[{I|L}C]}G{I|L}QEGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[ES]|[DT]|[{I|L}C]}G{I|L}QEGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RRSDEGY;[HT]EQ{I|L}YEGY;[AG]E{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}QEGY;{[DA]|[EG]}A{[ES]|[DT]|[{I|L}C]}G{I|L}QEGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}QEGY;[HT]EQ{I|L}G[YE]Y;{[DS]|[MA]|[CV]|TT}[RD]G{I|L}QEGY;[AG]E{[ES]|[DT]|[{I|L}C]}G{I|L}QWY 5.6209;5.3851;5.2942;5.1892;5.0433;4.9691;4.8113;4.6424;4.6359;4.6042 -;-;-;-;-;-;-;-;+;- + 1040 1 2.052 89346.4 1.0 1438 3214 4652 DOHH2_400M_050219_2,4654 DOHH2_400M_050219_2,4654,DSDRGLQEGY True True DSDRGLQEGY 23.788459 570.25059813261 5514857.5 4652.0 ENSG00000175931|ENST00000319380|UBE2O 6.8614020347595215 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4655 23.798 526.0 218710.0 25 0 33619.0 + 14209 IDLFFQLSY 9 91 573.2988901849534 1144.5832274367067 2 573.2986938357353 MULTI CID FTMS 0 0 0 4652 120325.2265625 0.8003447250181669 -1 0.0160255432128906 3 Unmodified _IDLFFQLSY_ REV__ENSG00000197102|ENST00000360184|DYNC1H1 14.838274106304384 0.4350285940865338 2 {NN|[MP]|[D{I|L}]|[EV]}[KP]T 5 -1 20.502 0.0 0.0 1.7912 0.0 0.0 0.0 587.2476310834442 587.2476310834442 3.548468315219118 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KP]T 1.7912 - 62 1 2.052 91964.3 1.0 1439 3214 4652 DOHH2_400M_050219_2,4655 DOHH2_400M_050219_2,4655,IDLFFQLSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4656 23.812 800.0 195750.0 25 0 50001.0 40271 VGTSGRAS 8 76 734.3764791492766 733.3692026826766 1 734.3763915896416 MULTI CID FTMS 0 0 0 4652 246288.859375 0.9007645003917364 2 -0.0690898895263671 4 Unmodified _VGTSGRAS_ nc|ENSG00000158296|Q8WWT9-4|SLC13A3;nc|ENSG00000158296|Q8WWT9-5|SLC13A3 0.7936320650641473 0.8195151834710337 2 EP{I|L}T{M(Oxidation (M))|F}K 6 8 + 42.564 0.0 0.0 5.8038 5.8038 85.137 0.0 0.0 0.0 9.01876881941427 9.01876881941427 9.01876881941427 9.01876881941427 0 1.1989700043360187 0.0 0.6307196863200843 0.0 EP{I|L}T{M(Oxidation (M))|F}K;[EP]{I|L}T{M(Oxidation (M))|F}Q;EP{I|L}[VG][YG];[KT]{M(Oxidation (M))|F}[{I|L}P]E;[{M(Oxidation (M))|F}T]K[{I|L}P]E;EHHRR 5.8038;4.5741;1.3605;0.66741;0.64392;0.60501 -;-;-;-;-;- 136 + 1 2.052 115716.8 0.8500000238418579 1440 3214 4652 DOHH2_400M_050219_2,4656 DOHH2_400M_050219_2,4656,VGTSGRAS False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 4658 23.828 800.0 172890.0 25 0 23106.0 + 24349 MEMGQEHQY 9 133 576.728615824762 1151.4426787163238 2 576.7256347537041 MULTI CID FTMS 0 0 0 4657 130242.7265625 0.5765977408502193 -4 0.0920085906982421 1 Unmodified _MEMGQEHQY_ ENSG00000163618|ENST00000383710|CADPS;nc|ENSG00000163618|Q9ULU8-2|CADPS;nc|ENSG00000163618|Q9ULU8-3|CADPS 65.23502041540118 0.0231836506122253 2 MEM[WQ]HQY 8 2 + 78.963 0.0 0.0 6.8578 6.8578 92.486 0.0 0.0 0.0 26.72788738785482 14.024174299985006 14.024174299985006 13.509562869230862 0 0.75 1.6989700043360187 0.4247425010840047 1.2302046884880935 MEM[WQ]HQY;MEM[WQ]H[AG]Y;ME[TP][C(Carbamidomethyl (C))S]HQY;MEYE[R{M(Oxidation (M))|F}]DY;MEY{[CA]|SS}[MN]QY;{[YC]|[HE]}QGMQEYM;{[YC]|[HE]}QGQMEYM;[HQ]EGMQEYM;{[YC]|[HE]}QGM[AG]EYM;{[YC]|[HE]}[AG]GMQEYM 6.8578;5.6845;5.2442;4.8849;4.3772;4.1798;4.0025;3.5372;3.3801;3.3801 -;-;-;-;-;-;-;-;-;- 679 + 1 2.052 106469.6 0.5899999737739563 1441 3215 4657 DOHH2_400M_050219_2,4658 DOHH2_400M_050219_2,4658,MEMGQEHQY True True MEMGQEHQY 23.82772 576.725634753704 1003232.625 4657.0 nc|ENSG00000163618|Q9ULU8-3|CADPS;;ENSG00000163618|ENST00000383710|CADPS;;nc|ENSG00000163618|Q9ULU8-2|CADPS 8.534547487894693 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4659 23.842 800.0 177700.0 25 0 18496.0 + 436 AEESDLSRQY 10 127 599.2729583764369 1196.5313638196735 2 599.2725707888603 MULTI CID FTMS 0 0 0 4657 143892.25 0.3678434408251679 -4 0.0920085906982421 2 Unmodified _AEESDLSRQY_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 97.74103586103692 0.0087788759135915 2 {[CP]|[EA]}ESD{I|L}SRQY 10 0 + 91.833 0.0 0.0 7.6749 7.6749 94.054 0.0 0.0 0.0 66.40957647436154 17.241317269119378 17.241317269119378 12.971736348700093 0 2.4049471895720984 0.0 0.75 1.5669015600442575 + + {[CP]|[EA]}ESD{I|L}SRQY;{[CP]|[EA]}ESD{I|L}SR[AG]Y;{[CP]|[EA]}ESD{I|L}SRH[PG];{[CP]|[EA]}EPT{[CT]|[{M(Oxidation (M))|F}G]}RQY;EEASD[RK]Y{[CP]|[EA]};EEASD[RK]{[CP]|[EA]}Y;{[CP]|[EA]}ESD[RK]Y{[CP]|[EA]};EESAD[RK]Y{[CP]|[EA]};{[CP]|[EA]}ES[RP]{[MS]|[{M(Oxidation (M))|F}A]}QY;{[CP]|[EA]}ESD[RK]{[CP]|[EA]}Y 7.6749;6.5908;5.9982;4.1975;4.0186;3.8511;3.3884;3.3267;3.2742;3.221 +;-;-;-;-;-;-;-;-;- + 692 + 1 2.052 109913.9 0.6600000262260437 1442 3215 4657 DOHH2_400M_050219_2,4659 DOHH2_400M_050219_2,4659,AEESDLSRQY True True AEESDLSRQY 23.841551 599.27257078886 1653860.0 4657.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 8.371724128723145 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4660 23.844 123.0 508300.0 25 0 126130.0 -1 0 82 502.28328994924425 501.27601348264426 1 502.2827941775322 MULTI CID FTMS 0 0 0 4657 237475.421875 0.4773637684232016 39 -1.478166580200195 3 2 [YT]D 3 -1 27.408 0.0 0.0 5.4677 0.0 0.0 0.0 119.11567958055365 119.11567958055365 21.72167511924052 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.7742275032520141 0.0 [YT]D 5.4677 - 20 1 2.052 53543.3 1.0 1443 3215 4657 DOHH2_400M_050219_2,4660 DOHH2_400M_050219_2,4660, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4662 23.849 36.0 1334900.0 25 0 110830.0 + 29118 QERPSVTSY 9 92 533.7614222321193 1065.5082915310386 2 533.7614013552666 MULTI CID FTMS 0 0 0 4661 1429371.875 0.46364583008963 5 -0.0851001739501953 1 Unmodified _QERPSVTSY_ ENSG00000196510|ENST00000455511|ANAPC7;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 53.832793166522166 0.0319663582346103 2 [HM]TY[RV]PY 8 7 + 51.445 0.0 0.0 4.8282 4.8282 76.763 0.0 0.0 0.0 36.8360688456422 1.8622710331052872 1.8622710331052872 4.216590673155736 0 1.0 0.0 0.5 0.7059771852360797 [HM]TY[RV]PY;[HM]TV[YR]PY;{[MG]|[TS]}[QP][RV]ESY;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]VTSY;{[DS]|[MA]|[CV]|TT}[NP][RV]ESY;[QT][PS][RV]ESY;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RV]ESY;{[MG]|[TS]}[QP][RV]TDY;[QA][W{M(Oxidation (M))|F}][RV]PY;{[DS]|[MA]|[CV]|TT}[NP][RV]TDY 4.8282;4.4325;3.3356;3.2763;2.4929;2.4929;2.4419;2.2318;2.2179;1.3891 -;-;-;-;-;-;-;-;-;- 331 + 1 2.052 44918.7 1.0 1444 3216 4661 DOHH2_400M_050219_2,4662 DOHH2_400M_050219_2,4662,QERPSVTSY True True QERPSVTSY 23.848753 533.761401355267 32179606.0 4661.0 nc|ENSG00000196510|Q9UJX3-2|ANAPC7;;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;;ENSG00000196510|ENST00000455511|ANAPC7 7.316576321919759 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4663 23.856 434.0 233220.0 25 0 17728.0 + -1 EERLCQPL 8 129 522.7630010835476 1043.511449233895 2 522.7634765505791 MULTI CID FTMS 0 0 0 4661 134567.859375 0.2866855319449234 4 -0.080942153930664 2 Carbamidomethyl (C) _EERLC(Carbamidomethyl (C))QPL_ REV__ENSG00000204138|ENST00000373839|PHACTR4;REV__ENST00000493669.2_1_1:28733953-28817463:+|nuORF;REV__nc|ENSG00000204138|Q8IZ21-2|PHACTR4;REV__nc|ENSG00000204138|Q8IZ21-3|PHACTR4 28.486842064014134 0.4448922141344407 2 EE[YT]RHP{I|L} 8 -1 + 50.746 0.0 0.0 4.863 4.863 86.553 0.0 0.0 0.0 18.09415163941899 26.22007059029449 18.09415163941899 19.863467363607786 0 0.8807196863200843 1.3979400086720375 0.6382104921644451 0.3494850021680094 EE[YT]RHP{I|L};{[ET]|[MV]}[YE]RHP{I|L};{[QN]|[E{I|L}]|[KN]}{[MG]|[TS]}[{M(Oxidation (M))|F}T]HP{I|L};{[QN]|[E{I|L}]|[KN]}[YV]{[CA]|SS}HP{I|L};{[QN]|[E{I|L}]|[KN]}{[HG]|PP}ANGHP{I|L};{[ET]|[MV]}{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T]HP{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q]RHP{I|L};[DP][Y{M(Oxidation (M))|F}]RHP{I|L};EE[YT]RH{I|L}P;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RN]{[CA]|SS}HP{I|L} 4.863;2.9595;2.9494;2.8039;2.6544;2.6514;2.2407;2.212;2.1436;2.122 -;-;-;-;-;-;-;-;-;- 435 1 2.052 81538.1 1.0 1445 3216 4661 DOHH2_400M_050219_2,4663 DOHH2_400M_050219_2,4663,EERLCQPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4664 23.858 86.0 714370.0 25 0 81047.0 + 1424 ALDPGTRDSY 10 82 547.7592895491239 1093.5040261650477 2 547.7591430544853 MULTI CID FTMS 0 0 0 4661 439046.375 0.7053064993092762 -3 0.0851154327392578 3 Unmodified _ALDPGTRDSY_ ENSG00000119403|ENST00000373896|PHF19;nc|ENSG00000119403|Q5T6S3-2|PHF19;nc|ENSG00000119403|Q5T6S3-3|PHF19 26.268140514670165 0.3785003716575977 2 [{I|L}A]D{M(Oxidation (M))|F}TSQE[{I|L}A] 10 7 + 59.798 0.0 0.0 5.4685 5.4685 87.491 0.0 0.0 0.0 1.98002754447419 43.76750709602099 1.98002754447419 12.971736348700098 0 1.3807196863200843 2.0 0.0 0.3807196863200844 [{I|L}A]D{M(Oxidation (M))|F}TSQE[{I|L}A];[{I|L}A]D{M(Oxidation (M))|F}TS[AG]E[{I|L}A];[{I|L}A]{M(Oxidation (M))|F}QST[NG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}A]D{M(Oxidation (M))|F}T[RD]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}TSQE[{I|L}A];[{I|L}A]{M(Oxidation (M))|F}[AG]ST[NG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}TSQE[{I|L}A];[{I|L}A]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R][NG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}TS[AG]E[{I|L}A];[{I|L}A]HYY[HQ]Y 5.4685;4.2822;4.1667;3.767;3.6878;3.3286;2.6317;2.5546;2.5016;2.3011 -;-;-;-;-;-;-;-;-;- 301 1 2.052 52165.8 1.0 1446 3216 4661 DOHH2_400M_050219_2,4664 DOHH2_400M_050219_2,4664,ALDPGTRDSY False True ALDPGTRDSY 23.858413 547.759143054485 3339057.5 4661.0 nc|ENSG00000119403|Q5T6S3-3|PHF19;;ENSG00000119403|ENST00000373896|PHF19;;nc|ENSG00000119403|Q5T6S3-2|PHF19 3.1014089584350586 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4665 23.861 143.0 517900.0 25 0 48503.0 + 7288 EEVEAKFKRY 10 80 433.5630678558632 1297.6673741677896 3 433.5625793337822 MULTI CID FTMS 0 0 0 4661 256026.625 0.915965341830175 -2 0.0690898895263671 4 Unmodified _EEVEAKFKRY_ ENSG00000106554|ENST00000262570|CHCHD3 29.84058131909904 0.2982332456971691 2 {[TV]|[{I|L}S]}HK{M(Oxidation (M))|F}KAEV[HC] 11 9 + 44.429 0.0 0.0 3.4237 3.4237 82.149 0.0 0.0 0.0 5.980440381944959 28.23098748362684 5.980440381944959 24.305785912415303 0 0.2302046884880938 0.0 0.7134679910804405 0.0 {[TV]|[{I|L}S]}HK{M(Oxidation (M))|F}KAEV[HC];{[TV]|[{I|L}S]}HK{M(Oxidation (M))|F}K[W{I|L}][HC] 3.4237;1.5507 -;- 108 1 2.052 63867.0 1.0 1447 3216 4661 DOHH2_400M_050219_2,4665 DOHH2_400M_050219_2,4665,EEVEAKFKRY False True EEVEAKFKRY 23.861284 433.562579333782 1344198.5 4661.0 ENSG00000106554|ENST00000262570|CHCHD3 7.770193099975586 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4666 23.865 171.0 381510.0 25 0 50888.0 -1 AESVPAHPC 9 70 484.2186139179364 966.4226749026728 2 484.2182800173759 MULTI CID FTMS 0 0 0 4661 153967.484375 0.4119936114124924 -4 0.1206512451171875 5 Carbamidomethyl (C) _AESVPAHPC(Carbamidomethyl (C))_ ENSG00000134909|ENST00000682385|ARHGAP32;nc|ENSG00000134909|A7KAX9-2|ARHGAP32;nc|ENSG00000134909|A7KAX9|ARHGAP32 28.486842064014134 0.1687311288560894 2 {[CP]|[EA]}S[DV]{[NV]|[RG]}AY 9 -1 + 25.096 0.0 0.0 2.5968 2.5968 70.744 0.0 0.0 0.0 5.910517660992273 4.771460743838407 4.771460743838407 4.771460743838407 0 0.8494850021680094 0.0 0.0 0.0 {[CP]|[EA]}S[DV]{[NV]|[RG]}AY;{[CP]|[EA]}[WP][VP]D[PG];{[WT]|[RM]}[VP]{[QC]|[C(Carbamidomethyl (C))A]}AY 2.5968;2.1031;1.615 -;-;- 54 + 1 2.052 54038.9 1.0 1448 3216 4661 DOHH2_400M_050219_2,4666 DOHH2_400M_050219_2,4666,AESVPAHPC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4668 23.876 504.0 215810.0 25 0 14416.0 + 16689 KEQGPYETY 9 150 557.7554568836475 1113.496360834095 2 557.7557250857353 MULTI CID FTMS 0 0 0 4667 140614.421875 0.4465901074239181 -6 0.1451358795166015 1 Unmodified _KEQGPYETY_ ENSG00000167325|ENST00000300738|RRM1 126.56589448801844 0.0036077350702044 2 {[TV]|[{I|L}S]}GQG{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ETY 10 3 + 76.222 0.0 0.0 6.8453 6.8453 81.141 0.0 0.0 0.0 1.9868445654303883 16.532125137753447 1.9868445654303883 1.9868445654303883 0 1.0 0.958607314841775 2.048455006504028 1.579689690656103 {[TV]|[{I|L}S]}GQG{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ETY;[YE]P{[QG]|[NA]}KETY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QG{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ETY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q[WM]ETY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ETY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{[QG]|[NA]}KETY;[Q{I|L}][SG]G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ETY;[TA]{[NV]|[RG]}G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ETY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[QA]KETY;[YE]HKHHTY 6.8453;6.6669;6.4791;5.6969;5.6522;5.6106;5.6087;5.5111;5.2802;5.2672 -;-;+;-;-;-;-;-;-;- + 2658 1 2.052 87832.5 1.0 1449 3217 4667 DOHH2_400M_050219_2,4668 DOHH2_400M_050219_2,4668,KEQGPYETY True True KEQGPYETY 23.875917 557.755725085735 5587325.0 4667.0 ENSG00000167325|ENST00000300738|RRM1 7.654096921284993 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4669 23.881 256.0 296700.0 25 0 128270.0 40708 VLGRFFLY 8 85 507.7934279979017 1013.5723030626034 2 508.2945434451103 MULTI CID FTMS 0 0 0 4667 144478.671875 0.9025605150352 -3 0.089599609375 2 Unmodified _VLGRFFLY_ ENSG00000007541|ENST00000321878|PIGQ;nc|ENSG00000007541|Q9BRB3|PIGQ 11.114462752807354 0.7467182956244686 2 [{I|L}V]N 3 6 25.942 0.0 0.0 2.5595 0.0 0.0 0.0 684.354657148794 684.354657148794 4.171043487920656 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]N 2.5595 - 108 1 2.052 63660.8 1.0 1450 3217 4667 DOHH2_400M_050219_2,4669 DOHH2_400M_050219_2,4669,VLGRFFLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4670 23.89 514.0 174420.0 25 0 19325.0 + 42188 VSEEDVSSRY 10 105 585.7689358248804 1169.5233187165609 2 585.7668945193291 MULTI CID FTMS 0 0 0 4667 110387.9140625 0.2941000907340835 -10 0.292093276977539 3 Unmodified _VSEEDVSSRY_ ENSG00000177425|ENST00000328827|PAWR 55.23464941255904 0.0494277333541689 2 VSEEDVS 7 3 85.75 0.0 0.0 7.332 0.0 0.0 0.0 421.18418298892817 421.18418298892817 63.52137288525008 0.0 0.0 0.0 0 0.7302046884880937 2.0 1.274227503252014 0.0 + VSEEDVS 7.332 + + 461 + 1 2.052 74488.1 1.0 1451 3217 4667 DOHH2_400M_050219_2,4670 DOHH2_400M_050219_2,4670,VSEEDVSSRY True True VSEEDVSSRY 23.889736 585.766894519329 1074838.75 4667.0 ENSG00000177425|ENST00000328827|PAWR 8.138766606648764 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4671 23.904 800.0 117390.0 25 0 3737.5 -1 0 76 768.6730855861706 2302.997427358712 3 768.6733276247978 MULTI CID FTMS 0 0 0 4667 80748.03125 0.5662320882826435 -3 0.089599609375 4 2 TVGGDE 6 -1 59.686 0.0 0.0 2.5916 0.0 0.0 1726.7606756400733 0.0 1726.7606756400733 0.0 16.969034597845436 0.0 0.0 0 1.3494850021680094 0.0 0.805462187404089 0.0 TVGGDE 2.5916 - 207 1 2.052 74354.6 0.4799999892711639 1452 3217 4667 DOHH2_400M_050219_2,4671 DOHH2_400M_050219_2,4671, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4673 23.908 107.0 518480.0 25 0 48475.0 + 6978 EEIKKETGF 9 78 540.7823948765584 1079.5502368199168 2 540.7824584841728 MULTI CID FTMS 0 0 0 4672 480811.9375 0.2404862911712512 5 -0.0730705261230468 1 Unmodified _EEIKKETGF_ ENSG00000187446|ENST00000334660|CHP1 34.40172386719151 0.1061884637610825 2 K{I|L}[HC] 4 8 21.198 0.0 0.0 1.9636 0.0 0.0 580.2860584943375 0.0 580.2860584943375 0.0 -1.989700043360188 -1.989700043360188 0.0 0 0.5 0.0 0.0 0.0 K{I|L}[HC] 1.9636 - 89 1 2.052 47441.7 1.0 1453 3218 4672 DOHH2_400M_050219_2,4673 DOHH2_400M_050219_2,4673,EEIKKETGF True True EEIKKETGF 23.908202 540.782458484173 18338414.0 4672.0 ENSG00000187446|ENST00000334660|CHP1 6.261976559956868 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4674 23.91 57.0 1242600.0 25 0 135530.0 38013 TPAFFSQTPI 10 108 554.7887515441381 1107.562950155076 2 554.7892333865166 MULTI CID FTMS 0 0 0 4672 1040318.5625 0.5639862280414284 -4 0.1285057067871093 2 Unmodified _TPAFFSQTPI_ ENSG00000158711|ENST00000357992|ELK4 28.49450938151212 0.328477364964909 2 TP{M(Oxidation (M))|F}K 4 7 41.375 0.0 0.0 3.7357 0.0 0.0 0.0 631.3131197565061 631.3131197565061 12.174165578762484 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 TP{M(Oxidation (M))|F}K 3.7357 - 291 + 1 2.052 61269.3 1.0 1454 3218 4672 DOHH2_400M_050219_2,4674 DOHH2_400M_050219_2,4674,TPAFFSQTPI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4675 23.912 74.0 1076000.0 25 0 182420.0 + 33060 SEQPAKATF 9 101 489.74803564987945 977.4815183665588 2 489.7480041384697 MULTI CID FTMS 0 0 0 4672 519718.71875 0.7356621946577059 -3 0.0920333862304687 3 Unmodified _SEQPAKATF_ ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153 26.268140514670165 0.1969607489560049 2 [KA]PAT{M(Oxidation (M))|F}Q{[ES]|[DT]|[{I|L}C]} 9 7 + 24.738 0.0 0.0 2.5308 2.5308 66.974 0.0 0.0 0.0 0.7378621416091917 10.758943047284871 0.7378621416091917 1.8839576472322683 0 0.0 0.0 0.2396518287104437 0.0 [KA]PAT{M(Oxidation (M))|F}Q{[ES]|[DT]|[{I|L}C]};[KA]PAT{M(Oxidation (M))|F}E{[QS]|[NT]};[KA]PAT{M(Oxidation (M))|F}[AG]{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q{M(Oxidation (M))|F}SH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]{M(Oxidation (M))|F}SH{I|L}{I|L};[KA][TA]P{M(Oxidation (M))|F}Q{[ES]|[DT]|[{I|L}C]} 2.5308;2.3381;1.5888;1.5601;0.61257;0.12445 -;-;-;-;-;- 348 1 2.052 68592.0 1.0 1455 3218 4672 DOHH2_400M_050219_2,4675 DOHH2_400M_050219_2,4675,SEQPAKATF False True SEQPAKATF 23.911725 489.74800413847 3228278.75 4672.0 nc|ENSG00000124789|P49790-2|NUP153;;ENSG00000124789|ENST00000262077|NUP153;;nc|ENSG00000124789|P49790-3|NUP153 4.691687981287639 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4677 23.918 199.0 261240.0 25 0 15998.0 -1 AGGKPITM 8 100 395.70972586434345 0 395.7098876833916 PEAK CID FTMS 0 0 0 4676 49173.26953125 0.4650448607055034 1 -0.0133724212646484 1 Oxidation (M) _AGGKPITM(Oxidation (M))_ ENSG00000114982|ENST00000431828|KANSL3;ENST00000487070.5_1_2:97267510-97285240:-|nuORF;ENST00000597150.5_1_2:97261350-97297069:-|nuORF;nc|ENSG00000114982|Q9P2N6-2|KANSL3;nc|ENSG00000114982|Q9P2N6-4|KANSL3;nc|ENSG00000114982|Q9P2N6|KANSL3 9.347437153973935 0.5488964601725408 2 S 1 -1 6.9897 0.0 0.0 0.88544 0.0 0.0 603.2676134945089 96.0824450128539 699.3500585073627 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.88544 - 20 + 1 2.052 45178.1 1.0 1456 3219 4676 DOHH2_400M_050219_2,4677 DOHH2_400M_050219_2,4677,AGGKPITM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4678 23.925 405.0 286830.0 25 0 40632.0 + 29445 QLHLRWKR 8 150 379.5637700481414 1135.6694807446245 3 379.5643798708916 MULTI CID FTMS 0 0 0 4676 97545.4921875 0.1551625265380644 -7 0.1882209777832031 2 Unmodified _QLHLRWKR_ REV__ENST00000342992.10_3_2:179542611-179544107:-|nuORF 5.230669730166228 0.792582437072536 2 {[QN]|[E{I|L}]|[KN]}[KT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}E 8 -1 17.038 0.0 0.0 1.5003 0.0 0.0 0.0 162.11792685157778 162.11792685157778 3.059032456749094 0.0 0.0 0.0 0 0.0 0.958607314841775 0.3807196863200844 0.0 {[QN]|[E{I|L}]|[KN]}[KT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}E 1.5003 - 88 1 2.052 94895.8 1.0 1457 3219 4676 DOHH2_400M_050219_2,4678 DOHH2_400M_050219_2,4678,QLHLRWKR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4681 23.945 800.0 296940.0 25 0 14600.0 + 18951 LDEDFLQTF 9 246 376.5121392592548 1126.5145883779644 3 376.5116149783134 MULTI CID FTMS 0 0 0 4680 44057.546875 0.4757024929191231 1 -0.0348854064941406 1 Unmodified _LDEDFLQTF_ REV__ENSG00000127329|ENST00000334414|PTPRB;REV__nc|ENSG00000127329|P23467-2|PTPRB;REV__nc|ENSG00000127329|P23467-4|PTPRB;REV__nc|ENSG00000127329|P23467|PTPRB 8.155526934196011 0.6299788542272896 2 {[CT]|[{M(Oxidation (M))|F}G]}[W{I|L}]EN{[SA]|[TG]}G{M(Oxidation (M))|F} 10 -1 {[CT]|[{M(Oxidation (M))|F}G]}[W{I|L}]EN{[SA]|[TG]}G + + 13.979 4.872 0.50674 1.2409 1.2409 46.968 0.0 0.0 0.0 0.0 -8.416375079047498 -8.416375079047498 0.0 0 0.0 0.0 0.0 0.0 {[CT]|[{M(Oxidation (M))|F}G]}[W{I|L}]EN{[SA]|[TG]}G{M(Oxidation (M))|F} 1.2409 - 409 + 1 2.048 185133.6 0.5299999713897705 1458 3221 4680 DOHH2_400M_050219_2,4681 DOHH2_400M_050219_2,4681,LDEDFLQTF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4682 23.959 800.0 136220.0 25 0 7484.0 + 32710 SEAGQPQAL 9 132 450.72438752980105 899.4342221264021 2 450.7245361208916 MULTI CID FTMS 0 0 0 4680 85885.515625 1.0 0 0.0 2 Unmodified _SEAGQPQAL_ ENSG00000160208|ENST00000340648|RRP1B;nc|ENSG00000160208|Q14684-2|RRP1B 46.020951573049366 0.0490941689151868 2 [QP]A 3 6 18.889 0.0 0.0 2.1001 0.0 0.0 0.0 600.2631765543896 600.2631765543896 3.315777585508976 0.0 0.0 0.0 0 0.0 0.585026652029182 0.0 0.4086280037772751 + [QP]A 2.1001 + + 221 1 2.048 88158.8 0.6100000143051147 1459 3221 4680 DOHH2_400M_050219_2,4682 DOHH2_400M_050219_2,4682,SEAGQPQAL True True SEAGQPQAL 23.959235 450.724536120892 620404.9375 4680.0 nc|ENSG00000160208|Q14684-2|RRP1B;;ENSG00000160208|ENST00000340648|RRP1B 5.629140853881836 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4683 23.964 271.0 445630.0 25 0 217880.0 -1 0 86 492.2989845052773 491.2917080386773 1 492.2986938357353 MULTI CID FTMS 0 0 0 4680 266866.15625 0.706481295494684 11 -0.48260498046875 3 2 Y 1 -1 13.979 0.0 0.0 2.8454 0.0 0.0 310.21742627773824 0.0 310.21742627773824 0.0 3.521825181113625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.8454 - 25 + 1 2.048 97163.8 1.0 1460 3221 4680 DOHH2_400M_050219_2,4683 DOHH2_400M_050219_2,4683, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4685 23.969 142.0 553320.0 25 0 38346.0 -1 ISPSRMPQPPN 11 92 620.3132283273969 1238.6119037215938 2 620.3129760622978 MULTI CID FTMS 0 0 0 4684 451853.8125 0.603557298097069 13 -0.5856246948242188 1 Oxidation (M) _ISPSRM(Oxidation (M))PQPPN_ ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP 14.40537977576856 0.7354982482299568 2 {[HG]|PP}AMPPPPP[QP]N 12 -1 {[HG]|PP}AM + + 70.954 13.188 3.3286 5.7285 5.7285 58.417 0.0 0.0 0.0 0.0 47.889180660303694 0.0 0.0 0 2.774227503252014 0.0 0.0 1.2856668758921828 {[HG]|PP}AMPPPPP[QP]N 5.7285 - 1776 + 1 2.048 64836.9 1.0 1461 3222 4684 DOHH2_400M_050219_2,4685 DOHH2_400M_050219_2,4685,ISPSRMPQPPN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4686 23.971 79.0 1144200.0 25 0 216020.0 + 14637 IIKDKHIL 8 88 490.3181450672985 978.6217372013972 2 490.3176147341728 MULTI CID FTMS 0 0 0 4684 697693.625 0.9352973931379952 -1 0.0348854064941406 2 Unmodified _IIKDKHIL_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 49.55428908609986 0.1413437743149504 2 {I|L}{I|L}KDKH{I|L}{I|L} 8 0 + 79.325 0.0 0.0 8.1058 8.1058 97.95 0.0 0.0 0.0 66.22638030421327 7.034021960761265 7.034021960761265 57.25870203867208 0 1.6936726795685342 2.0 0.805462187404089 0.0 + + {I|L}{I|L}KDKH{I|L}{I|L};[KA][TA]H{I|L}{I|L}{I|L}{I|L};[TA][KA]H{I|L}{I|L}{I|L}{I|L};[TA][HA]K{I|L}{I|L}{I|L}{I|L};[TA][HA]{I|L}K{I|L}{I|L}{I|L};[KA][TA]{I|L}{I|L}H{I|L}{I|L};[TA][KA]{I|L}{I|L}H{I|L}{I|L} 8.1058;2.2549;2.0282;1.8482;1.7492;0.55191;0.32521 +;-;-;-;-;-;- + 205 + 1 2.048 74216.0 1.0 1462 3222 4684 DOHH2_400M_050219_2,4686 DOHH2_400M_050219_2,4686,IIKDKHIL False True IIKDKHIL 23.971166 490.317614734173 3669244.0 4684.0 ENST00000591595.5_1_19:11130023-11172489:+|nuORF;;ENSG00000080503|ENST00000349721|SMARCA2;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;nc|ENSG00000080503|P51531-2|SMARCA2;;ENSG00000127616|ENST00000344626|SMARCA4;;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 1.7630844910939534 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4687 23.974 151.0 615390.0 25 0 57674.0 + -1 RELEGKTGF 9 101 518.7717020020489 0 518.7740356326103 PEAK CID FTMS 0 0 0 4684 294600.4375 0.6284440227210655 -3 0.0524158477783203 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MRLRNGTF_ nc|ENSG00000088992|Q96BS2-3|TESC;ENSG00000088992|ENST00000335209|TESC;nc|ENSG00000088992|Q96BS2-2|TESC 23.1484247019978 0.3584660196589264 2 GTKG 4 -1 26.785 0.0 0.0 2.5866 0.0 0.0 165.07301218666163 524.2462252252561 689.3192374119178 0.0 0.0 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.4247425010840047 GTKG 2.5866 - 34 + 1 2.048 73833.8 1.0 1463 3222 4684 DOHH2_400M_050219_2,4687 DOHH2_400M_050219_2,4687,MRLRNGTF False False RELEGKTGF 23.974183 518.77403563261 2631699.0 4684.0 nc|ENSG00000088992|Q96BS2-3|TESC;;ENSG00000088992|ENST00000335209|TESC;;nc|ENSG00000088992|Q96BS2-2|TESC 3.4900383154551187 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4688 23.977 129.0 538680.0 25 0 118770.0 + 6482 EAHARIHL 8 79 473.7645475795029 945.5145422258058 2 473.7636291384697 MULTI CID FTMS 0 0 0 4684 216622.640625 0.6395406789482818 -4 0.0605697631835937 4 Unmodified _EAHARIHL_ ENSG00000073111|ENST00000265056|MCM2;ENST00000468414.1_1_3:127336783-127340613:+|nuORF;ENST00000474964.5_1_3:127323572-127340613:+|nuORF 52.268347100219714 0.1285778651304833 2 [HA]EAR{I|L}H{I|L} 8 2 + 39.931 0.0 0.0 4.2232 4.2232 78.579 0.0 0.0 0.0 2.764209843288903 29.473666748066663 2.764209843288903 8.550981955100383 0 1.3979400086720375 0.0 1.1549471895720984 0.0 [HA]EAR{I|L}H{I|L};{[CP]|[EA]}HAR{I|L}H{I|L};[H{I|L}]G{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}H{I|L};[HA]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}H{I|L};[H{I|L}][WQ]{I|L}H{I|L};[HA][KG][NG]{I|L}H{I|L};[H{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}AEH{I|L};[HA][R{I|L}]AEH{I|L};[H{I|L}]G{[VA]|[{I|L}G]}AEH{I|L};[HA]V{[VA]|[{I|L}G]}AEH{I|L} 4.2232;3.3189;2.7076;2.6368;2.0804;1.2033;1.0908;1.02;0.953;0.8822 -;+;-;-;-;-;-;-;-;- + 95 1 2.048 58498.2 1.0 1464 3222 4684 DOHH2_400M_050219_2,4688 DOHH2_400M_050219_2,4688,EAHARIHL False True EAHARIHL 23.976808 473.76362913847 1719275.0 4684.0 ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2;;ENST00000468414.1_1_3:127336783-127340613:+|nuORF 3.6531941890716553 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4690 23.982 163.0 547230.0 25 0 231360.0 -1 0 83 458.29665812543146 457.2893816588315 1 458.2957946658134 MULTI CID FTMS 0 0 0 4689 469818.03125 0.3170176325855707 -3 0.051544189453125 1 2 {I|L} 1 -1 11.109 0.0 0.0 2.4294 0.0 0.0 326.19460734418146 0.0 326.19460734418146 0.0 11.10924374808178 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.4294 - 6 + 1 2.048 74724.2 1.0 1465 3223 4689 DOHH2_400M_050219_2,4690 DOHH2_400M_050219_2,4690, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4691 23.988 318.0 179520.0 25 0 17680.0 + 33164 SEYARPHVM 9 91 545.2613281464145 1088.5081033596289 2 545.2612792849541 MULTI CID FTMS 0 0 0 4689 107656.15625 1.0 0 0.0 2 Unmodified _SEYARPHVM_ ENSG00000111676|ENST00000396684|ATN1;ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE 28.49450938151212 0.1686335738423394 2 {[ES]|[DT]|[{I|L}C]}Y 3 6 11.695 0.0 0.0 1.0744 0.0 0.0 0.0 706.3465670221311 706.3465670221311 0.7255998297264217 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}Y 1.0744 + + 79 + 1 2.048 49007.9 1.0 1466 3223 4689 DOHH2_400M_050219_2,4691 DOHH2_400M_050219_2,4691,SEYARPHVM False True SEYARPHVM 23.987981 545.261279284954 1157575.5 4689.0 ENSG00000142599|ENST00000400908|RERE;;ENSG00000111676|ENST00000396684|ATN1;;nc|ENSG00000142599|Q9P2R6-2|RERE 6.612235387166341 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4692 23.997 493.0 237240.0 25 0 15678.0 + 1851 ALVERKQPL 9 153 351.8856380582868 1052.6350847750605 3 351.8848144412041 MULTI CID FTMS 0 0 0 4689 125435.375 0.4645686880029296 -2 0.0473861694335937 3 Unmodified _ALVERKQPL_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 19.256988751693697 0.3154191944385105 2 A{I|L}V 3 6 49.45 0.0 0.0 4.6978 0.0 0.0 0.0 766.4204581881374 766.4204581881374 36.23738508322962 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + A{I|L}V 4.6978 + + 58 + 1 2.048 96708.6 1.0 1467 3223 4689 DOHH2_400M_050219_2,4692 DOHH2_400M_050219_2,4692,ALVERKQPL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4693 24.004 438.0 156930.0 25 0 7635.5 + 33165 SEYARPHVM 9 119 363.8424113309114 0 363.8424865603447 PEAK CID FTMS 0 0 0 4689 100666.5 1.0 0 0.0 4 Unmodified _SEYARPHVM_ ENSG00000111676|ENST00000396684|ATN1;ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE 17.11289562659939 0.230679707888486 2 VE 2 8 5.1773 0.0 0.0 0.71345 0.0 0.0 362.4855601112384 132.04566370181877 494.5312238130572 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 VE 0.71345 - 10 + 1 2.048 62414.4 1.0 1468 3223 4689 DOHH2_400M_050219_2,4693 DOHH2_400M_050219_2,4693,SEYARPHVM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4694 24.018 800.0 164200.0 25 0 16096.0 + 1852 ALVERKQPL 9 139 527.3236372397523 1052.6327215463043 2 527.3243896365166 MULTI CID FTMS 0 0 0 4689 94118.7734375 0.6557805589570919 -3 0.051544189453125 5 Unmodified _ALVERKQPL_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 32.78568957990786 0.1150597335874693 2 A{I|L}V 3 6 46.872 0.0 0.0 4.4528 0.0 0.0 0.0 766.4215181940061 766.4215181940061 30.26394473861056 0.0 0.0 0.0 0 0.6694451763165201 2.0 0.0 0.0 + A{I|L}V 4.4528 + + 318 + 1 2.048 104234.9 0.5099999904632568 1469 3223 4689 DOHH2_400M_050219_2,4694 DOHH2_400M_050219_2,4694,ALVERKQPL True True ALVERKQPL 24.018289 527.324389636517 2419323.75 4689.0 nc|ENSG00000141030|Q9UNS2-2|COPS3;;ENSG00000141030|ENST00000268717|COPS3 3.773940324783325 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4696 24.034 800.0 157850.0 25 0 14469.0 + 31820 RTAIHEVM 8 123 478.7531787990668 955.4918046649336 2 478.7522155642509 MULTI CID FTMS 0 0 0 4695 60954.51953125 0.2304318865778889 7 -0.3851795196533203 1 Unmodified _RTAIHEVM_ ENSG00000112118|ENST00000596288|MCM3;ENSG00000166508|ENST00000303887|MCM7;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;nc|ENSG00000112118|P25205-2|MCM3;nc|ENSG00000166508|P33993-3|MCM7 9.38312468134398 0.7673771031149565 2 TEVM 4 4 35.974 0.0 0.0 3.765 0.0 0.0 477.274705955275 0.0 477.274705955275 0.0 23.75569708000178 0.0 0.0 0 0.6421590589602533 0.0 0.0 0.0 TEVM 3.765 - 224 1 2.048 103390.2 0.5299999713897705 1470 3224 4695 DOHH2_400M_050219_2,4696 DOHH2_400M_050219_2,4696,RTAIHEVM False True RTAIHEVM 24.034252 478.752215564251 2853677.75 4695.0 nc|ENSG00000166508|P33993-3|MCM7;;ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3;;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;;ENSG00000166508|ENST00000303887|MCM7 2.2087182650963464 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4697 24.041 393.0 325630.0 25 0 25961.0 + 42353 VTDDSPKYNY 10 141 601.2715898298453 1200.5286267264903 2 601.2715942263603 MULTI CID FTMS 0 0 0 4695 257901.328125 0.185191906728099 -3 0.0888309478759765 2 Unmodified _VTDDSPKYNY_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 147.24064527209634 6.21940260476086e-05 2 VTDDSPKYNY 10 0 + 119.0 0.0 0.0 9.9127 9.9127 95.804 0.0 0.0 0.0 59.62602858053063 19.22020165476472 19.22020165476472 12.051794385463609 0 1.9040820565447216 2.0 0.9916440611282626 1.7931576817365436 + + VTDDSPKYNY;VTDDSPKYGGY;VTDDS{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y;VTD[TP][QT]YNY;VTDD[HM][KP]C(Carbamidomethyl (C))V;VTD[TP]SAAYNY;VTP{[ES]|[DT]|[{I|L}C]}[QT]YNY;VTP{[ES]|[DT]|[{I|L}C]}SAAYNY;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DNDTVY;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DNDTYV 9.9127;8.9088;7.4315;6.4013;6.3921;6.1968;5.6454;5.4409;5.0478;4.7769 +;-;-;-;-;-;-;-;-;- + 8993 + 1 2.048 97059.2 1.0 1471 3224 4695 DOHH2_400M_050219_2,4697 DOHH2_400M_050219_2,4697,VTDDSPKYNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4698 24.049 446.0 272320.0 25 0 32753.0 + 16003 ITDTTRDVY 9 136 542.2690949450453 1082.5236369568904 2 542.2675048708916 MULTI CID FTMS 0 0 0 4695 151342.96875 0.4009375347189854 -2 0.0539455413818359 3 Unmodified _ITDTTRDVY_ ENSG00000161904|ENST00000293760|LEMD2 34.93206674587334 0.1032771302489716 2 {I|L}TDT[RK]Q 7 4 60.846 0.0 0.0 5.6207 0.0 0.0 0.0 237.0516604059204 237.0516604059204 32.56942793162208 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {I|L}TDT[RK]Q 5.6207 - 537 + 1 2.048 94096.4 1.0 1472 3224 4695 DOHH2_400M_050219_2,4698 DOHH2_400M_050219_2,4698,ITDTTRDVY True True ITDTTRDVY 24.049239 542.267504870892 1791560.375 4695.0 ENSG00000161904|ENST00000293760|LEMD2 4.906751155853272 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4699 24.059 572.0 160960.0 25 0 23078.0 + 16158 ITYMEYQI 8 129 530.7556628352113 1059.4967727372225 2 530.7551147341728 MULTI CID FTMS 0 0 0 4695 91333.3125 0.8220035243596647 -1 0.0414447784423828 4 Unmodified _ITYMEYQI_ REV__ENSG00000104613|ENST00000397977|INTS10 28.486842064014134 0.4448922141344407 2 {I|L}T{NN|[MP]|[D{I|L}]|[EV]}YYSW 8 -1 + 43.95 0.0 0.0 4.1482 4.1482 68.468 0.0 0.0 0.0 7.930857318066849 3.689032153388396 3.689032153388396 0.1230450566754512 0 0.3807196863200844 2.0 0.0 1.0 {I|L}T{NN|[MP]|[D{I|L}]|[EV]}YYSW;{I|L}T[C(Carbamidomethyl (C))R][HT]SW;{I|L}T{NN|[MP]|[D{I|L}]|[EV]}YYC(Carbamidomethyl (C)){I|L};{I|L}T[C(Carbamidomethyl (C))R][HT]C(Carbamidomethyl (C)){I|L};[{I|L}T][HD][NG]{I|L}QY;[{I|L}T][HD][NG]Q{I|L}Y;{I|L}T[C(Carbamidomethyl (C))R][WP]MP;[YQ]YY{NN|[MP]|[D{I|L}]|[EV]}VP;[PG][NP]G{[QS]|[NT]}{I|L}QY;{[CT]|[{M(Oxidation (M))|F}G]}[YV][NG]{I|L}QY 4.1482;4.1366;3.6606;3.649;3.5164;3.3502;3.0749;0.55878;0.43276;0.4262 -;-;-;-;-;-;-;-;-;- 471 + 1 2.048 73889.0 1.0 1473 3224 4695 DOHH2_400M_050219_2,4699 DOHH2_400M_050219_2,4699,ITYMEYQI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4701 24.064 143.0 451960.0 25 0 59305.0 + 45449 YTDVSTRY 8 94 502.736464799925 1003.45837666665 2 502.7363769412041 MULTI CID FTMS 0 0 0 4700 243688.34375 0.6076894818806607 1 -0.0390586853027343 1 Unmodified _YTDVSTRY_ ENSG00000213593|ENST00000278422|TMX2;ENST00000436507.2_1_9:37885847-37886384:+|nuORF;nc|ENSG00000213593|Q9Y320-2|TMX2 32.78568957990786 0.3549862272178655 2 YTDVS 5 3 58.232 0.0 0.0 5.8031 0.0 0.0 0.0 435.1973360651001 435.1973360651001 38.69448070049671 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + YTDVS 5.8031 + + 56 + 1 2.048 56262.7 1.0 1474 3225 4700 DOHH2_400M_050219_2,4701 DOHH2_400M_050219_2,4701,YTDVSTRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4702 24.071 371.0 204170.0 25 0 50165.0 + 6034 DSDRGLQEGY 10 84 570.2514833211062 1138.4884137090123 2 570.2507812380791 MULTI CID FTMS 0 0 0 4700 166934.8125 0.2830820511325849 7 -0.3529624938964844 2 Unmodified _DSDRGLQEGY_ ENSG00000175931|ENST00000319380|UBE2O 18.373094154950223 0.5392593366289069 2 {I|L}QEGY 5 5 46.559 0.0 0.0 4.0895 0.0 0.0 530.214159080275 0.0 530.214159080275 0.0 31.86629600628644 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 + {I|L}QEGY 4.0895 + + 225 1 2.048 62454.4 1.0 1475 3225 4700 DOHH2_400M_050219_2,4702 DOHH2_400M_050219_2,4702,DSDRGLQEGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4703 24.072 33.0 1813100.0 25 0 227820.0 + 18007 KSDSGKPYYY 10 79 604.2847516843693 1206.5549504355386 2 604.2841674685478 MULTI CID FTMS 0 0 0 4700 1790663.375 0.9720215117151696 2 -0.117532730102539 3 Unmodified _KSDSGKPYYY_ ENSG00000196504|ENST00000545856|PRPF40A;ENST00000467114.2_1_2:153535806-153549567:-|nuORF;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A 34.221707139014875 0.2185845369562963 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WR]YPYY 8 7 + 58.109 0.0 0.0 4.8161 4.8161 71.234 0.0 0.0 0.0 17.754537344402905 30.6618377346446 17.754537344402905 0.2287874528033739 0 1.3494850021680094 1.6989700043360187 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WR]YPYY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[WR]PYY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DV]KYPYY;[KG]{[C(Carbamidomethyl (C))E]|[WC]}KYPYY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KYY;KSD[YQ][Q{I|L}]YY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YKY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WR]Y{[QS]|[NT]}[HA];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[WR]{[QS]|[NT]}[HA];KSD[C(Carbamidomethyl (C))N][WR]{[QN]|[E{I|L}]|[KN]} 4.8161;4.7972;4.7737;3.1161;2.9512;2.6974;2.2873;1.8939;1.8749;1.6434 -;-;-;-;-;-;-;-;-;- 211 1 2.048 48962.0 1.0 1476 3225 4700 DOHH2_400M_050219_2,4703 DOHH2_400M_050219_2,4703,KSDSGKPYYY False True KSDSGKPYYY 24.071962 604.284167468548 12471216.0 4700.0 ENSG00000196504|ENST00000545856|PRPF40A;;nc|ENSG00000196504|O75400-3|PRPF40A;;ENST00000467114.2_1_2:153535806-153549567:-|nuORF;;nc|ENSG00000196504|O75400|PRPF40A;;nc|ENSG00000196504|O75400-2|PRPF40A 6.028245449066162 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4704 24.086 800.0 196220.0 25 0 8759.0 + 29488 QLKHKLEQL 9 146 568.8422844635671 1135.6700159939342 2 568.8422729372978 MULTI CID FTMS 0 0 0 4700 172747.15625 0.8471168055079437 1 -0.0390586853027343 4 Unmodified _QLKHKLEQL_ ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC 51.629811660486645 0.0367964933207742 2 [Q{I|L}]E[HK]K{I|L}Q{I|L} 9 2 + 59.482 0.0 0.0 5.2376 5.2376 84.425 0.0 0.0 0.0 14.273174902439573 14.973024840566469 14.273174902439573 9.208187539523747 0 1.055462187404089 1.6989700043360187 0.2887254899964357 1.4489700043360187 [Q{I|L}]E[HK]K{I|L}Q{I|L};[Q{I|L}]E[HK]K{I|L}[AG]{I|L};[AG]{I|L}E[HK]K{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}Q[HK]K{I|L}Q{I|L};[AG]{I|L}E[HK]K{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[HK]QK{I|L}Q{I|L};[AG]E{I|L}[HK]K{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}Q[HK]K{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[AG][HK]K{I|L}Q{I|L};[HK]{I|L}EQK{I|L}Q{I|L} 5.2376;4.4268;3.9808;3.633;3.1738;3.0816;2.9417;2.8222;2.8222;2.7453 -;-;-;-;-;-;-;-;-;- 1422 1 2.048 120762.2 0.7799999713897705 1477 3225 4700 DOHH2_400M_050219_2,4704 DOHH2_400M_050219_2,4704,QLKHKLEQL True True QLKHKLEQL 24.085795 568.842272937298 856103.875 4700.0 nc|ENSG00000136997|P01106-3|MYC;;nc|ENSG00000136997|P01106-1|MYC;;ENSG00000136997|ENST00000621592|MYC 0.2766194635381301 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4705 24.091 304.0 368530.0 25 0 97346.0 + + 8293 GEVSARQEL 9 121 494.73421502209135 987.4538771109828 2 494.7322875857353 MULTI CID FTMS 0 0 0 4700 120499.828125 1.0 0 0.0 5 Unmodified _EQNGEGELI_ ENSG00000167658|ENST00000309311|EEF2 19.256988751693697 0.3154191944385105 2 {[DA]|[EG]}A 3 -1 24.398 0.0 0.0 2.4708 0.0 0.0 0.0 727.3286994588921 727.3286994588921 8.199849938126889 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.3494850021680094 0.0 {[DA]|[EG]}A 2.4708 - 300 1 2.048 92109.4 1.0 1478 3225 4700 DOHH2_400M_050219_2,4705 DOHH2_400M_050219_2,4705,EQNGEGELI False False GEVSARQEL 24.091341 494.732287585735 557961.5 4700.0 ENSG00000167658|ENST00000309311|EEF2 3.0120016733805337 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4706 24.095 202.0 293570.0 25 0 35682.0 -1 0 86 534.3114396615106 533.3041631949105 1 534.3103515505791 MULTI CID FTMS 0 0 0 4700 265145.625 0.6830457704086919 -6 0.1471729278564453 6 2 SY 2 -1 14.949 0.0 0.0 2.803 0.0 0.0 265.198768763073 0.0 265.198768763073 0.0 5.270790162935528 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 2.803 - 29 + 1 2.048 52385.5 1.0 1479 3225 4700 DOHH2_400M_050219_2,4706 DOHH2_400M_050219_2,4706, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4707 24.098 160.0 405990.0 25 0 42032.0 -1 0 77 585.271816966535 584.2645404999349 1 585.2718383669853 MULTI CID FTMS 0 0 0 4700 242420.828125 0.3294484158208628 -2 0.0822563171386718 7 2 Y 1 -1 15.485 0.0 0.0 2.6503 0.0 0.0 403.1901061511052 0.0 403.1901061511052 0.0 5.30726239543597 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.6503 - 69 + 1 2.048 54168.1 1.0 1480 3225 4700 DOHH2_400M_050219_2,4707 DOHH2_400M_050219_2,4707, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4709 24.115 777.0 231200.0 25 0 15607.0 + 32791 KCCTESLVNR 10 154 576.728615824762 1151.4426787163238 2 577.2334472537041 MULTI CID FTMS 0 0 0 4708 187898.6875 0.8090283827944101 1 -0.0784740447998046 1 Unmodified _SEEMEEENR_ P02768-1;ENSG00000163631|ENST00000295897|ALB;nc|ENSG00000163631|P02768-3|ALB;nc|ENSG00000163631|P02768-2|ALB;P02769 11.640296217721598 0.521594087909532 2 TES{I|L}VNR 7 6 64.975 0.0 0.0 5.6429 0.0 0.0 334.01349278058007 0.0 334.01349278058007 0.0 50.370973408029045 0.0 0.0 0 0.0 0.0 0.4247425010840047 1.025072226357214 TES{I|L}VNR 5.6429 - 184 + 1 2.036 134765.5 1.0 1481 3226 4708 DOHH2_400M_050219_2,4709 DOHH2_400M_050219_2,4709,SEEMEEENR False False KCCTESLVNR 24.114612 577.233447253704 554909.5 4708.0 P02768-1;;ENSG00000163631|ENST00000295897|ALB;;nc|ENSG00000163631|P02768-3|ALB;;nc|ENSG00000163631|P02768-2|ALB;;P02769 -0.0183125436305999 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4710 24.117 89.0 947200.0 25 0 200560.0 + 509 AEHDRIARQW 10 81 427.8861755672382 1280.6366973019146 3 427.8855773806572 MULTI CID FTMS 0 0 0 4708 493315.03125 1.0 0 0.0 2 Unmodified _AEHDRIARQW_ ENSG00000170035|ENST00000410062|UBE2E3 34.93206674587334 0.2110832994570416 2 AEHDR{I|L}A 7 3 68.55 0.0 0.0 5.3528 0.0 0.0 0.0 485.2273043268188 485.2273043268188 56.56041375986099 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.5 0.4247425010840047 + AEHDR{I|L}A 5.3528 + + 76 + 1 2.036 72473.6 1.0 1482 3226 4708 DOHH2_400M_050219_2,4710 DOHH2_400M_050219_2,4710,AEHDRIARQW False True AEHDRIARQW 24.116569 427.885577380657 3025686.0 4708.0 ENSG00000170035|ENST00000410062|UBE2E3 4.871424039204915 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4711 24.12 183.0 589600.0 25 0 70550.0 + 8002 EMKEKKPEM 9 101 383.8606431622055 1148.5601000868166 3 383.8601867556572 MULTI CID FTMS 0 0 0 4708 190715.5 0.0626423513442828 -2 0.0798702239990234 3 Unmodified _EMKEKKPEM_ REV__ENSG00000102755|ENST00000282397|FLT1;REV__nc|ENSG00000102755|P17948-5|FLT1;REV__nc|ENSG00000102755|P17948-6|FLT1 18.1463463914782 0.3454829746528889 2 T[QA]QQT{I|L}YN 9 -1 30.656 0.0 0.0 2.6691 0.0 0.0 83.0377445905289 0.0 83.0377445905289 0.0 11.918943457229162 0.0 0.0 0 0.5 0.0 0.5994850021680094 0.6861818737241735 T[QA]QQT{I|L}YN 2.6691 - 56 1 2.036 88436.9 1.0 1483 3226 4708 DOHH2_400M_050219_2,4711 DOHH2_400M_050219_2,4711,EMKEKKPEM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4712 24.129 498.0 318600.0 25 0 21751.0 + 40190 VGPTTGRPQL 10 148 513.2900712105345 1024.565589487869 2 513.2900268435478 MULTI CID FTMS 0 0 0 4708 117109.078125 0.1422969446879457 -2 0.0798702239990234 4 Unmodified _VGPTTGRPQL_ REV__ENST00000576886.5_1_16:2834849-2835800:-|nuORF 45.69961567697781 0.105390671673896 2 [VG]PTGAR[PS]A{I|L} 11 -1 + 62.968 0.0 0.0 6.1459 6.1459 88.925 0.0 0.0 0.0 23.784384089833736 2.4394232197923813 2.4394232197923813 9.463028091742297 0 1.673877368056628 2.0 0.7134679910804405 0.0 [VG]PTGAR[PS]A{I|L};[VG]PTQR[PS]A{I|L};RPTGA[VG][PS]A{I|L};[VG]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HD]K{I|L};[VG]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP]{I|L}R;RPTQ[VG][PS]A{I|L};[TP]K[{M(Oxidation (M))|F}E]YK{I|L};[VG]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[Q{I|L}]PR;[VG]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP]R{I|L};[VG]P[Y{I|L}][VS]KY 6.1459;5.2222;4.1938;3.6327;3.2748;3.2702;3.2618;3.1321;3.1154;2.9753 -;-;-;-;-;-;-;-;-;- 935 + 1 2.036 131714.9 1.0 1484 3226 4708 DOHH2_400M_050219_2,4712 DOHH2_400M_050219_2,4712,VGPTTGRPQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4713 24.143 800.0 117050.0 25 0 27768.0 510 AEHDRIARQW 10 99 641.3244254531443 1280.6342979730885 2 641.3232910037041 MULTI CID FTMS 0 0 0 4708 81598.609375 1.0 0 0.0 5 Unmodified _AEHDRIARQW_ ENSG00000170035|ENST00000410062|UBE2E3 38.17557092003332 0.1768326257063233 2 QW 2 8 20.049 0.0 0.0 1.5656 0.0 0.0 948.4850497814854 0.0 948.4850497814854 0.0 5.445312593723983 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 + QW 1.5656 + + 149 + 1 2.036 72190.8 0.7200000286102295 1485 3226 4708 DOHH2_400M_050219_2,4713 DOHH2_400M_050219_2,4713,AEHDRIARQW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4714 24.149 351.0 261660.0 25 0 22194.0 -1 VGCIPLTI 8 120 436.7503742899924 871.4861956467848 2 436.7502014040947 MULTI CID FTMS 0 0 0 4708 295071.90625 1.0 0 0.0 6 Carbamidomethyl (C) _VGC(Carbamidomethyl (C))IPLTI_ ENSG00000172209|ENST00000304402|GPR22 28.17323086031832 0.4514957916281387 2 [RV]NVGNT{I|L} 8 -1 + 58.74 0.0 0.0 6.7402 6.7402 86.97 0.0 0.0 0.0 5.726825097560422 35.011145963361784 5.726825097560422 7.231975075880328 0 0.9247425010840048 0.0 0.4247425010840047 0.6139829889124311 [RV]NVGNT{I|L};{[NV]|[RG]}RVGNT{I|L};[RV]NVGGGT{I|L};[RV]GGVGNT{I|L};{[NV]|[RG]}RVGGGT{I|L};[RV]GGVGGGT{I|L};[VP]T[WR]T{I|L};[RV]N{[QN]|[E{I|L}]|[KN]}E{I|L};{[NV]|[RG]}R{[QN]|[E{I|L}]|[KN]}E{I|L};[RV]GG{[QN]|[E{I|L}]|[KN]}E{I|L} 6.7402;5.9104;5.6774;5.6774;4.8476;4.6208;3.4298;3.4228;2.5929;2.3521 -;-;-;-;-;-;-;-;-;- 216 1 2.036 77306.5 1.0 1486 3226 4708 DOHH2_400M_050219_2,4714 DOHH2_400M_050219_2,4714,VGCIPLTI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4715 24.163 800.0 63209.0 25 0 33873.0 -1 0 45 902.483447253704 0 902.483447253704 PEAK CID FTMS 0 0 0 -1 0 7 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.036 44843.5 0.6100000143051147 1487 3226 4708 DOHH2_400M_050219_2,4715 DOHH2_400M_050219_2,4715, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4716 24.177 800.0 38789.0 25 0 9566.1 -1 0 38 1168.145312488079 0 1168.145312488079 PEAK CID FTMS 0 0 0 -1 0 8 2 E 1 -1 5.4846 0.0 0.0 0.23496 0.0 0.0 1678.048512749565 524.1621187799436 2202.210631529508 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.23496 - 1 + 1 2.036 34544.9 0.5 1488 3226 4708 DOHH2_400M_050219_2,4716 DOHH2_400M_050219_2,4716, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4718 24.182 65.0 662990.0 25 0 72166.0 38014 TPAFFSQTPI 10 81 554.7887515441381 1107.562950155076 2 554.7877075076103 MULTI CID FTMS 0 0 0 4717 682496.8125 0.3700008985778075 5 -0.2354297637939453 1 Unmodified _TPAFFSQTPI_ ENSG00000158711|ENST00000357992|ELK4 11.494710602746466 0.654671931888957 2 TP{M(Oxidation (M))|F}K 4 7 44.201 0.0 0.0 3.9908 0.0 0.0 0.0 631.3139132135374 631.3139132135374 29.49600975727897 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 TP{M(Oxidation (M))|F}K 3.9908 - 85 + 1 2.017 41401.0 1.0 1489 3227 4717 DOHH2_400M_050219_2,4718 DOHH2_400M_050219_2,4718,TPAFFSQTPI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4719 24.185 156.0 308430.0 25 0 26008.0 19237 LEHVEKIRL 9 87 379.5637700481414 1135.6694807446245 3 379.5634338259697 MULTI CID FTMS 0 0 0 4717 176301.359375 0.2804369913900105 1 -0.0931949615478515 2 Unmodified _LEHVEKIRL_ ENSG00000125375|ENST00000557421|DMAC2L;ENST00000554438.5_1_14:50779073-50792438:+|nuORF;ENST00000555939.5_1_14:50779073-50791268:+|nuORF;ENST00000556962.1_1_14:50789283-50790835:+|nuORF 4.3292370932331545 0.7635526921153418 2 {I|L} 1 8 14.604 0.0 0.0 1.2859 0.0 0.0 1004.5747216887634 0.0 1004.5747216887634 0.0 4.119543704721593 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2859 + + 26 + 1 2.017 41570.1 1.0 1490 3227 4717 DOHH2_400M_050219_2,4719 DOHH2_400M_050219_2,4719,LEHVEKIRL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4720 24.187 107.0 839170.0 25 0 205850.0 24602 MLKYFATFE 9 66 575.2868837089234 1148.5592144846466 2 575.2861205935478 MULTI CID FTMS 0 0 0 4717 550349.9375 0.3928270686325034 -1 0.0784740447998046 3 Unmodified _MLKYFATFE_ ENSG00000108239|ENST00000225235|TBC1D12 10.823927491677226 0.5436922275383211 2 M[DV]MP 5 8 24.08 0.0 0.0 2.0966 0.0 0.0 0.0 572.3330782525999 572.3330782525999 5.585456211725202 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 M[DV]MP 2.0966 - 23 + 1 2.017 73242.4 1.0 1491 3227 4717 DOHH2_400M_050219_2,4720 DOHH2_400M_050219_2,4720,MLKYFATFE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4721 24.201 800.0 235400.0 25 0 69349.0 + 36877 TENTEENRRFY 11 75 729.8341093778955 1457.653665822591 2 729.8339721560478 MULTI CID FTMS 0 0 0 4717 208178.296875 0.3303142686007086 -2 0.117532730102539 4 Unmodified _TENTEENRRFY_ ENSG00000149925|ENST00000642816|ALDOA;ENST00000564521.6_1_16:30075769-30079042:+|nuORF;ENST00000566012.1_1_16:30077179-30079547:+|nuORF;nc|ENSG00000149925|P04075|ALDOA 48.56086444690353 0.1255999645772737 2 Y{M(Oxidation (M))|F}[YT]EN[VG]R{M(Oxidation (M))|F}Y 11 6 + 63.492 0.0 0.0 4.3558 4.3558 52.945 0.0 0.0 0.0 28.27092544744847 3.4768294003359657 3.4768294003359657 0.0 0 0.9247425010840048 0.0 0.5 0.805462187404089 Y{M(Oxidation (M))|F}[YT]EN[VG]R{M(Oxidation (M))|F}Y;Y{M(Oxidation (M))|F}[YT]ENR[VG]{M(Oxidation (M))|F}Y;Y{M(Oxidation (M))|F}[YT][TA]ARR{M(Oxidation (M))|F}Y;{[ET]|[MV]}MT{NN|[MP]|[D{I|L}]|[EV]}[WP]R{M(Oxidation (M))|F}Y 4.3558;4.3558;3.6816;2.7417 -;-;-;- 300 + 1 2.017 136817.4 0.9900000095367432 1492 3227 4717 DOHH2_400M_050219_2,4721 DOHH2_400M_050219_2,4721,TENTEENRRFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4722 24.215 800.0 196010.0 25 0 10610.0 + 16690 KEQGPYETY 9 189 557.7554568836475 1113.496360834095 2 557.7548095583916 MULTI CID FTMS 0 0 0 4717 198284.546875 0.6297498927110614 4 -0.2268352508544922 5 Unmodified _KEQGPYETY_ ENSG00000167325|ENST00000300738|RRM1 71.92227651296345 0.0203558744033348 2 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}GQKETY 9 4 + 60.443 0.0 0.0 5.4282 5.4282 73.445 0.0 0.0 0.0 0.1579426718323233 12.252684618815088 0.1579426718323233 0.1579426718323233 0 1.1331596456423734 1.0457574905606752 1.0356668758921828 0.9634679910804403 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}GQKETY;[YE]PGQKETY;{[QN]|[E{I|L}]|[KN]}[{I|L}A][{M(Oxidation (M))|F}E]ETY;{[QN]|[E{I|L}]|[KN]}[WQ]Q{M(Oxidation (M))|F}TY;[DP]YAQKETY;{[QN]|[E{I|L}]|[KN]}[{I|L}A]M[C(Carbamidomethyl (C))N]TY;[PG]YEQKETY;[SG][Q{I|L}]GPYETY;[DV]WRQ{M(Oxidation (M))|F}TY;{[QN]|[E{I|L}]|[KN]}[WQ][AG]{M(Oxidation (M))|F}TY 5.4282;5.414;4.7931;4.6017;4.3498;4.1373;4.0605;3.9361;3.8207;3.7699 -;-;-;-;-;-;-;-;-;- 2699 1 2.017 120774.2 1.0 1493 3227 4717 DOHH2_400M_050219_2,4722 DOHH2_400M_050219_2,4722,KEQGPYETY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4723 24.229 800.0 94241.0 25 0 25861.0 -1 0 46 1084.784519854366 3251.331730163298 3 1085.453295886517 MULTI CID FTMS 0 0 0 4717 181021.984375 0.6423726732898128 -1 0.0784740447998046 6 2 G 1 -1 6.9897 0.0 0.0 0.21498 0.0 0.0 1856.6621119053625 1334.624501951744 3191.286613857106 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21498 - 2 + 1 2.017 74946.6 0.7599999904632568 1494 3227 4717 DOHH2_400M_050219_2,4723 DOHH2_400M_050219_2,4723, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4724 24.242 800.0 193010.0 25 0 16218.0 + 8462 ESSQHTLNY 9 168 539.7427614728441 1077.470970012488 2 539.7427856326103 MULTI CID FTMS 0 0 0 4717 179775.125 1.0 0 0.0 7 Unmodified _ESSQHTLNY_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 82.5293158979368 0.0169039238599547 2 ESP{I|L}T 5 6 40.09 0.0 0.0 3.7207 0.0 0.0 0.0 547.1907442682249 547.1907442682249 12.86145157500352 0.0 0.0 0.0 0 0.2809455398520895 1.5228787452803376 0.8494850021680094 0.0 ESP{I|L}T 3.7207 - 1862 + 1 2.017 118450.5 0.9700000286102296 1495 3227 4717 DOHH2_400M_050219_2,4724 DOHH2_400M_050219_2,4724,ESSQHTLNY True True ESSQHTLNY 24.242419 539.74278563261 1088941.625 4717.0 ENST00000394768.6_2_14:64542710-64692241:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2;;nc|ENSG00000054654|Q8WXH0-7|SYNE2 6.111241340637207 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4725 24.256 800.0 217800.0 25 0 14302.0 + 8009 EMLTKKSTL 9 152 525.79665817683 1049.5787634204598 2 525.7953369021416 MULTI CID FTMS 0 0 0 4717 130078.625 0.6482588340792369 -1 0.0784740447998046 8 Unmodified _EMLTKKSTL_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 107.09958533191995 0.0072323465566536 2 EM{I|L}TKKST{I|L} 9 0 + 98.027 0.0 0.0 9.3397 9.3397 99.053 0.0 0.0 0.0 57.8043709524361 20.001065266032228 20.001065266032228 58.31335046133316 0 1.8007408513639958 2.0 1.6866654986684733 0.0 + + EM{I|L}TKKST{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TKKST{I|L};EM[YR]KKVP;{I|L}HS[HQ]KST{I|L};{[YD]|[{M(Oxidation (M))|F}M]}[VP]KKST{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ETKKST{I|L};[KG]{[C(Carbamidomethyl (C))E]|[WC]}KKST{I|L};[{I|L}T]KKMEST{I|L};{I|L}{M(Oxidation (M))|F}MTSKKVP;{I|L}{M(Oxidation (M))|F}MTKSKVP 9.3397;3.7838;3.3716;3.1608;2.837;2.8004;2.3782;2.284;2.1058;2.042 +;+;-;-;-;-;-;-;-;- + 1134 + 1 2.017 137226.4 0.8500000238418579 1496 3227 4717 DOHH2_400M_050219_2,4725 DOHH2_400M_050219_2,4725,EMLTKKSTL True True EMLTKKSTL 24.25625 525.795336902142 991750.8125 4717.0 ENST00000470585.5_1_1:38445118-38455637:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 4.333847999572754 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4726 24.263 303.0 261960.0 25 0 19254.0 + 16716 KEVDVSKQL 9 117 523.2987655732369 1044.5829782132737 2 523.2971069216728 MULTI CID FTMS 0 0 0 4717 193813.03125 0.8895614367998596 -1 0.0784740447998046 9 Unmodified _KEVDVSKQL_ ENSG00000128944|ENST00000249776|KNSTRN;ENST00000560220.5_1_15:40676698-40685795:+|nuORF;ENST00000560673.1_1_15:40675453-40678696:+|nuORF;nc|ENSG00000128944|Q9Y448-2|KNSTRN;nc|ENSG00000128944|Q9Y448-3|KNSTRN 70.32083430771065 0.02097493322155 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VDVSKQ{I|L} 9 0 + 71.499 0.0 0.0 6.8447 6.8447 79.369 0.0 0.0 0.0 0.5935146117450216 13.246816679698584 0.5935146117450216 0.5935146117450216 0 2.249134866972623 0.0 0.9604093769761876 0.9005149978319906 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VDVSKQ{I|L};{I|L}SGVDVSKQ{I|L};{I|L}SGVVDSKQ{I|L};{[TV]|[{I|L}S]}GVDVSKQ{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VDVSK[AG]{I|L};{I|L}SG{I|L}{[CP]|[EA]}SKQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KSVDPQ{I|L};{[TV]|[{I|L}S]}GVDVSK[AG]{I|L};{I|L}SGVDVSK[AG]{I|L};{[QN]|[E{I|L}]|[KN]}ASAVSKQ{I|L} 6.8447;6.7879;6.592;6.4466;5.9632;5.6114;5.5766;5.5692;5.504;5.4105 +;-;-;-;-;-;-;-;-;- + 1882 1 2.017 66634.2 1.0 1497 3227 4717 DOHH2_400M_050219_2,4726 DOHH2_400M_050219_2,4726,KEVDVSKQL True True KEVDVSKQL 24.263261 523.297106921673 1274389.5 4717.0 ENSG00000128944|ENST00000249776|KNSTRN;;ENST00000560673.1_1_15:40675453-40678696:+|nuORF;;nc|ENSG00000128944|Q9Y448-2|KNSTRN;;nc|ENSG00000128944|Q9Y448-3|KNSTRN;;ENST00000560220.5_1_15:40676698-40685795:+|nuORF 5.29272214571635 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4727 24.27 358.0 206720.0 25 0 23889.0 -1 SETDMVRQI 9 111 547.7592895491239 1093.5040261650477 2 547.7577392458916 MULTI CID FTMS 0 0 0 4717 125895.6328125 0.2022451684228355 8 -0.3733348846435547 10 Oxidation (M) _SETDM(Oxidation (M))VRQI_ ENSG00000149823|ENST00000279281|VPS51 17.11289562659939 0.3734572693229295 2 {[ES]|[DT]|[{I|L}C]}TD{M(Oxidation (M))|F}V 6 -1 22.625 0.0 0.0 2.069 0.0 0.0 0.0 412.2324617975219 412.2324617975219 8.645162531850872 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}TD{M(Oxidation (M))|F}V 2.069 + + 96 + 1 2.017 62296.2 1.0 1498 3227 4717 DOHH2_400M_050219_2,4727 DOHH2_400M_050219_2,4727,SETDMVRQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4729 24.276 108.0 603870.0 25 0 42654.0 + 10651 FVQLCPYKGQG 11 82 620.3132283273969 1238.6119037215938 2 620.3116332888603 MULTI CID FTMS 0 0 0 4728 493848.6875 0.6596513545988589 19 -0.7249107360839844 1 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 2 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 75.32 10.177 2.5688 6.081 6.081 59.651 0.0 0.0 0.0 0.0 61.19000922458062 0.0 0.0 0 2.3494850021680094 0.0 0.0 1.5941876774005248 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 6.081 - 1016 + 1 2.009 53103.9 1.0 1499 3228 4728 DOHH2_400M_050219_2,4729 DOHH2_400M_050219_2,4729,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4730 24.289 800.0 107060.0 25 0 5325.0 -1 0 95 694.3147404395713 2079.922391918914 3 694.6472045779228 MULTI CID FTMS 0 0 0 4728 170948.3125 1.0 0 0.0 2 2 GWTG[WR] 6 -1 34.385 0.0 0.0 1.6532 0.0 0.0 1318.5857463086352 0.0 1318.5857463086352 0.0 18.028871982441355 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 GWTG[WR] 1.6532 - 602 1 2.009 68213.7 0.5799999833106995 1500 3228 4728 DOHH2_400M_050219_2,4730 DOHH2_400M_050219_2,4730, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4731 24.291 24.0 2781600.0 25 0 422050.0 + 36879 TENTEENRRFY 11 72 486.89172605446703 1457.6533487636011 3 486.8911620974541 MULTI CID FTMS 0 0 0 4728 2142183.25 0.9748256430932548 -1 0.0931949615478515 3 Unmodified _TENTEENRRFY_ ENSG00000149925|ENST00000642816|ALDOA;ENST00000564521.6_1_16:30075769-30079042:+|nuORF;ENST00000566012.1_1_16:30077179-30079547:+|nuORF;nc|ENSG00000149925|P04075|ALDOA 28.270515756011903 0.428402293028943 2 TENTEE 6 5 83.959 0.0 0.0 5.7599 0.0 0.0 0.0 751.3644608189293 751.3644608189293 72.2762969932814 0.0 0.0 0.0 0 1.1307196863200843 2.0 0.0 0.8494850021680094 + TENTEE 5.7599 + + 188 + 1 2.009 57353.1 1.0 1501 3228 4728 DOHH2_400M_050219_2,4731 DOHH2_400M_050219_2,4731,TENTEENRRFY False True TENTEENRRFY 24.290616 486.891162097454 12965458.0 4728.0 ENST00000566012.1_1_16:30077179-30079547:+|nuORF;;nc|ENSG00000149925|P04075|ALDOA;;ENSG00000149925|ENST00000642816|ALDOA;;ENST00000564521.6_1_16:30075769-30079042:+|nuORF 3.926302154858907 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4732 24.297 327.0 651970.0 25 0 43780.0 + -1 SGDVMVCCTS 10 163 558.2097899608096 1114.4050269884192 2 558.2093383669853 MULTI CID FTMS 0 0 0 4728 426208.8125 0.0794721851704649 -5 0.2929840087890625 4 2 Carbamidomethyl (C) _SGDVMVC(Carbamidomethyl (C))C(Carbamidomethyl (C))TS_ REV__ENSG00000030582|ENST00000053867|GRN;REV__nc|ENSG00000030582|P28799-2|GRN 24.020572477871973 0.4289996903560794 2 DCTT{I|L}HY 7 -1 38.704 0.0 0.0 3.473 0.0 0.0 263.05836058392543 0.0 263.05836058392543 0.0 3.4833606817677776 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DCTT{I|L}HY 3.473 - 560 + 1 2.009 159747.3 1.0 1502 3228 4728 DOHH2_400M_050219_2,4732 DOHH2_400M_050219_2,4732,SGDVMVCCTS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4733 24.299 131.0 702860.0 25 0 81603.0 + 17744 KPYQKVGL 8 113 466.7820601905415 931.549567447883 2 466.7815124392509 MULTI CID FTMS 0 0 0 4728 338244.25 0.4833394644897087 -4 0.2515392303466797 5 Unmodified _KPYQKVGL_ ENSG00000163104|ENST00000354268|SMARCAD1;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;nc|ENSG00000163104|Q9H4L7-3|SMARCAD1 50.855029805455786 0.1352255786796883 2 GVKPCG{I|L} 7 6 37.297 0.0 0.0 4.0038 0.0 0.0 259.19051090667045 0.0 259.19051090667045 0.0 9.065016059448332 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.2396518287104437 GVKPCG{I|L} 4.0038 - 611 + 1 2.009 75125.1 1.0 1503 3228 4728 DOHH2_400M_050219_2,4733 DOHH2_400M_050219_2,4733,KPYQKVGL False True KPYQKVGL 24.299231 466.781512439251 4110397.25 4728.0 nc|ENSG00000163104|Q9H4L7-3|SMARCAD1;;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;;ENSG00000163104|ENST00000354268|SMARCAD1 3.4591609636942544 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4734 24.302 156.0 445930.0 25 0 69646.0 42617 VTSTQTIRQ 9 95 517.284729685848 0 517.2842285037041 PEAK CID FTMS 0 0 0 4728 197902.71875 0.5366316758154693 -7 0.3403701782226562 6 Unmodified _VTSTQTIRQ_ ENSG00000080298|ENST00000617270|RFX3 20.453626601364224 0.1969592619112565 2 TAPP 4 8 13.889 0.0 0.0 1.3451 0.0 0.0 247.1179690379084 416.2292269342407 663.347195972149 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 TAPP 1.3451 - 24 + 1 2.009 58138.5 1.0 1504 3228 4728 DOHH2_400M_050219_2,4734 DOHH2_400M_050219_2,4734,VTSTQTIRQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4735 24.307 274.0 334090.0 25 0 53337.0 + 11094 GEEGSARMW 9 101 519.71841181945 1037.4222707057 2 519.7180663943291 MULTI CID FTMS 0 0 0 4728 166714.296875 0.8500890466167982 -2 0.1716690063476562 7 Oxidation (M) _GEEGSARM(Oxidation (M))W_ ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF 43.77239144664712 0.0547478964384323 2 {[DA]|[EG]}EGSAR{M(Oxidation (M))|F}W 9 0 + 65.008 0.0 0.0 6.2663 6.2663 85.685 0.0 0.0 0.0 46.06791285705228 13.448434684565813 13.448434684565813 7.562893943202624 0 1.066901560044258 2.0 0.3807196863200844 0.0 + + {[DA]|[EG]}EGSAR{M(Oxidation (M))|F}W;{[DA]|[EG]}EG{M(Oxidation (M))|F}[WK]W;{[DA]|[EG]}EG[WK]{M(Oxidation (M))|F}W;{[DA]|[EG]}E{[QS]|[NT]}R{M(Oxidation (M))|F}W;[C(Carbamidomethyl (C))H][{I|L}P]ASG[C(Carbamidomethyl (C))H];[KP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TGE[EC];[KP]{[MS]|[{M(Oxidation (M))|F}A]}ASGE[EC];[C(Carbamidomethyl (C))H][{I|L}P]{[QS]|[NT]}[C(Carbamidomethyl (C))H];[KP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TW[EC];[KP]{[MS]|[{M(Oxidation (M))|F}A]}ASW[EC] 6.2663;5.5373;4.9951;4.4148;2.1154;0.80657;0.65803;0.2639;0.18212;0.028379 +;-;-;-;-;-;-;-;-;- + 186 + 1 2.009 75536.8 1.0 1505 3228 4728 DOHH2_400M_050219_2,4735 DOHH2_400M_050219_2,4735,GEEGSARMW True False GEEGSARMW 24.307396 519.718066394329 1260258.125 4728.0 ENST00000550009.1_1_12:120875908-120876378:+|nuORF;;ENSG00000111775|ENST00000229379|COX6A1 6.368754227956136 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4736 24.313 287.0 480770.0 25 0 33587.0 + 40060 VGGQENRLQM 10 130 377.85657895009336 1130.54790745048 3 377.8563110232353 MULTI CID FTMS 0 0 0 4728 147921.984375 1.0 0 0.0 8 Unmodified _VGGQENRLQM_ REV__nc|ENSG00000124215|Q8IXH8-1|CDH26 12.240655878213236 0.6421556946785427 2 DM 2 -1 23.315 0.0 0.0 2.0623 0.0 0.0 866.4698872862208 0.0 866.4698872862208 0.0 7.4505936365141405 0.0 0.0 0 0.3807196863200844 0.0 0.3054621874040891 0.0 DM 2.0623 - 297 + 1 2.009 111724.2 1.0 1506 3228 4728 DOHH2_400M_050219_2,4736 DOHH2_400M_050219_2,4736,VGGQENRLQM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4737 24.324 669.0 124600.0 25 0 8075.0 + 15759 ISDHGTVTY 9 116 496.73682984185865 991.4591067505172 2 496.7362243533134 MULTI CID FTMS 0 0 0 4728 90777.1328125 1.0 0 0.0 9 Unmodified _ISDHGTVTY_ ENSG00000005893|ENST00000200639|LAMP2;nc|ENSG00000005893|P13473-2|LAMP2;nc|ENSG00000005893|P13473-3|LAMP2 48.345845343767074 0.0439967357579942 2 VD{[NV]|[RG]}TY 6 5 43.659 0.0 0.0 4.4035 0.0 0.0 282.11903214289856 0.0 282.11903214289856 0.0 21.70818753952375 0.0 0.0 0 0.0 0.0 1.674742501084005 0.0 VD{[NV]|[RG]}TY 4.4035 - 657 + 1 2.009 69965.5 1.0 1507 3228 4728 DOHH2_400M_050219_2,4737 DOHH2_400M_050219_2,4737,ISDHGTVTY True True ISDHGTVTY 24.324279 496.736224353313 346148.65625 4728.0 nc|ENSG00000005893|P13473-2|LAMP2;;nc|ENSG00000005893|P13473-3|LAMP2;;ENSG00000005893|ENST00000200639|LAMP2 6.418311754862468 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4738 24.328 185.0 560260.0 25 0 178950.0 + -1 TSSAVTTALK 10 112 490.28294588126175 489.27566941466176 1 490.2830078005791 MULTI CID FTMS 0 0 0 4728 316497.6875 0.5212282136800144 -7 0.3403701782226562 10 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 2 P 1 -1 11.594 0.0 0.0 2.3696 0.0 0.0 374.2121069530391 0.0 374.2121069530391 0.0 0.1763772847485967 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.3696 - 42 + 1 2.009 85292.8 1.0 1508 3228 4728 DOHH2_400M_050219_2,4738 DOHH2_400M_050219_2,4738, False False TSSAVTTALK 24.327839 490.283007800579 2194360.75 4728.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 6.934528191884358 2.0 False 10.0 True splicing PXD020620_cell_line DOHH2_400M_050219_2 4739 24.336 407.0 313370.0 25 0 26186.0 + 2536 ASEASRLAHY 10 122 552.7754240108402 1103.5362950884803 2 552.7749511599541 MULTI CID FTMS 0 0 0 4728 256768.296875 0.9874442123560416 -1 0.0931949615478515 11 Unmodified _ASEASRLAHY_ ENSG00000146047|ENST00000274764|H2BC1;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENST00000436555.1_1_1:228651947-228652295:-|nuORF 121.3458533713876 0.000430218257633 2 ASE[WK]{I|L}AHY 9 3 + 76.38 0.0 0.0 6.9214 6.9214 85.346 0.0 0.0 0.0 5.364520488096403 5.364520488096403 5.364520488096403 5.364520488096403 0 2.4291746928241125 1.3979400086720375 0.0 0.6505149978319906 ASE[WK]{I|L}AHY;{[SA]|[TG]}EA[VS]G{I|L}AHY;ASE[WK]{I|L}AYH;{[SA]|[TG]}EA[R{I|L}]SAHY;{[SA]|[TG]}E[WK]{I|L}AHY;{[SA]|[TG]}EA[R{I|L}]TGHY;AS{[MG]|[TS]}A[{I|L}A]{I|L}AHY;AS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[{I|L}A]{I|L}AHY;{[ES]|[DT]|[{I|L}C]}AA[VS]G{I|L}AHY;AS{[MG]|[TS]}A[{I|L}A]{I|L}AYH 6.9214;6.4353;6.2174;6.0902;5.9925;5.462;5.3443;5.316;4.8119;4.6403 -;-;-;-;-;-;-;-;-;- 963 + 1 2.009 96757.3 1.0 1509 3228 4728 DOHH2_400M_050219_2,4739 DOHH2_400M_050219_2,4739,ASEASRLAHY True True ASEASRLAHY 24.336291 552.774951159954 1534585.0 4728.0 ENSG00000185130|ENST00000377401|H2BC13;;ENSG00000146047|ENST00000274764|H2BC1;;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;;ENSG00000196890|ENST00000693095|H2BC26 8.726395606994629 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4741 24.344 285.0 209660.0 25 0 26404.0 + 42354 VTDDSPKYNY 10 101 601.2715898298453 1200.5286267264903 2 601.2716552615166 MULTI CID FTMS 0 0 0 4740 210639.171875 0.1512542419023613 2 -0.0670738220214843 1 Unmodified _VTDDSPKYNY_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 74.19965305603844 0.0188013450058842 2 VTDDSP[YK]NY 10 0 + 76.093 0.0 0.0 6.3383 6.3383 90.453 0.0 0.0 0.0 50.41402596017612 6.319006879220055 6.319006879220055 12.219161359540143 0 1.1307196863200843 1.6989700043360187 0.0 0.6861818737241735 + + VTDDSP[YK]NY;VTDDSP[YK]GGY;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N[C(Carbamidomethyl (C))R]NY;[KP]YSDD{[TV]|[{I|L}S]}NY;[KP]YSN[C(Carbamidomethyl (C))R]NY;[KP]YSGG[C(Carbamidomethyl (C))R]NY 6.3383;5.3205;1.8041;1.1615;1.0552;0.28816 +;-;-;-;-;- + 554 + 1 2.009 45238.5 1.0 1510 3229 4740 DOHH2_400M_050219_2,4741 DOHH2_400M_050219_2,4741,VTDDSPKYNY True True VTDDSPKYNY 24.343789 601.271655261517 15206618.0 4740.0 nc|ENSG00000090861|P49588-2|AARS1;;ENSG00000090861|ENST00000261772|AARS1 8.295524915059408 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4742 24.358 800.0 52654.0 25 0 9774.7 -1 0 45 1066.7579215558342 3197.2519352677027 3 1067.427172839642 MULTI CID FTMS 0 0 0 4740 141440.546875 1.0 0 0.0 2 2 {M(Oxidation (M))|F}A 2 -1 10.969 0.0 0.0 0.34308 0.0 0.0 1912.6800788629228 1063.4810274713502 2976.161106334273 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}A 0.34308 - 9 + 1 2.009 46320.4 0.5299999713897705 1511 3229 4740 DOHH2_400M_050219_2,4742 DOHH2_400M_050219_2,4742, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4744 24.368 360.0 231310.0 25 0 16043.0 -1 0 90 585.271816966535 584.2645404999349 1 585.2720825076103 MULTI CID FTMS 0 0 0 4743 97257.875 0.1321728545054383 3 -0.0974807739257812 1 2 [{I|L}P]C(Carbamidomethyl (C))S 4 -1 17.625 0.0 0.0 3.0165 0.0 0.0 0.0 124.04253057245369 124.04253057245369 2.9318250140072166 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}P]C(Carbamidomethyl (C))S 3.0165 - 68 1 2.009 66086.4 1.0 1512 3230 4743 DOHH2_400M_050219_2,4744 DOHH2_400M_050219_2,4744, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4745 24.376 439.0 224170.0 25 0 22319.0 + 26095 NPHVPSTRL 9 121 510.7828191193237 1019.5510853054476 2 510.7826415896416 MULTI CID FTMS 0 0 0 4743 136884.015625 0.4681883746222273 -3 0.1811885833740234 2 Unmodified _NPHVPSTRL_ REV__ENSG00000174137|ENST00000308132|FAM53A;REV__ENST00000489363.5_2_4:1643022-1645966:-|nuORF 30.63653989081413 0.1413794767160703 2 NPHTR[VP]S{I|L} 9 -1 + 57.714 0.0 0.0 5.6607 5.6607 90.975 0.0 0.0 0.0 45.93102124026176 3.473510712788759 3.473510712788759 35.06003846527281 0 0.2742275032520141 1.0 0.9802046884880936 0.0 NPHTR[VP]S{I|L};NPH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}[PA] 5.6607;2.2219 -;- 180 + 1 2.009 78314.9 1.0 1513 3230 4743 DOHH2_400M_050219_2,4745 DOHH2_400M_050219_2,4745,NPHVPSTRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4746 24.389 800.0 160830.0 25 0 16872.0 + 5636 DPDTLISLYE 10 112 583.2855486122337 1164.5565442912673 2 583.2840453982353 MULTI CID FTMS 0 0 0 4743 129193.578125 0.7483143807890272 1 -0.0456466674804687 3 Unmodified _DPDTLISLYE_ REV__ENSG00000084674|ENST00000233242|APOB 14.838274106304384 0.5985701837916485 2 [{I|L}P]DP 4 -1 27.167 0.0 0.0 2.3328 0.0 0.0 0.0 739.3066107798016 739.3066107798016 3.9232681533000857 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P]DP 2.3328 - 574 1 2.009 97848.2 0.6499999761581421 1514 3230 4743 DOHH2_400M_050219_2,4746 DOHH2_400M_050219_2,4746,DPDTLISLYE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4747 24.403 800.0 166850.0 25 0 16581.0 + 13036 RPKIQQQF 8 150 523.2987655732369 1044.5829782132737 2 522.8010131716728 MULTI CID FTMS 0 0 0 4743 112620.78125 0.941313721199674 1 -0.0456466674804687 4 Unmodified _HAVDVVLRH_ nc|ENSG00000101161|O94906-2|PRPF6;ENSG00000101161|ENST00000266079|PRPF6 15.847184025352805 0.4077185912009129 2 [RP]K{I|L}QQQ 7 9 30.226 0.0 0.0 2.8936 0.0 0.0 0.0 163.05560124391425 163.05560124391425 9.73210348515305 0.0 0.0 0.0 0 0.0 0.0 0.0 1.2302046884880935 [RP]K{I|L}QQQ 2.8936 - 597 1 2.009 102744.4 0.5699999928474426 1515 3230 4743 DOHH2_400M_050219_2,4747 DOHH2_400M_050219_2,4747,HAVDVVLRH False False RPKIQQQF 24.403262 522.801013171673 641371.6875 4743.0 nc|ENSG00000101161|O94906-2|PRPF6;;ENSG00000101161|ENST00000266079|PRPF6 3.7403883934021 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4749 24.408 46.0 1544800.0 25 0 130610.0 + 8003 EMKEKKPEM 9 82 383.8606431622055 1148.5601000868166 3 383.8604308962822 MULTI CID FTMS 0 0 0 4748 1011700.875 0.3323029416438011 3 -0.0871906280517578 1 Unmodified _EMKEKKPEM_ REV__ENSG00000102755|ENST00000282397|FLT1;REV__nc|ENSG00000102755|P17948-5|FLT1;REV__nc|ENSG00000102755|P17948-6|FLT1 11.640296217721598 0.521594087909532 2 M 1 -1 16.99 0.0 0.0 1.4792 0.0 0.0 999.5087980622058 0.0 999.5087980622058 0.0 1.5000655322351264 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.4792 + + 29 + 1 2.009 62269.8 1.0 1516 3231 4748 DOHH2_400M_050219_2,4749 DOHH2_400M_050219_2,4749,EMKEKKPEM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4750 24.412 214.0 285400.0 25 0 27798.0 + 40191 VGPTTGRPQL 10 78 513.2900712105345 1024.565589487869 2 513.2900268435478 MULTI CID FTMS 0 0 0 4748 215529.0625 0.2618851379947817 3 -0.0871906280517578 2 Unmodified _VGPTTGRPQL_ REV__ENST00000576886.5_1_16:2834849-2835800:-|nuORF 16.149105407346934 0.5765757077271437 2 [VG]PTGT 6 -1 52.33 0.0 0.0 5.1075 0.0 0.0 0.0 509.269845830725 509.269845830725 39.23100902752003 0.0 0.0 0.0 0 0.6923877696554315 2.0 0.0 0.0 [VG]PTGT 5.1075 - 76 + 1 2.009 56799.9 1.0 1517 3231 4748 DOHH2_400M_050219_2,4750 DOHH2_400M_050219_2,4750,VGPTTGRPQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4752 24.416 42.0 1140500.0 25 0 77066.0 + 42414 VTEIDQDKY 9 81 555.7697469783673 1109.5249410235344 2 555.7691528201103 MULTI CID FTMS 0 0 0 4751 1415655.375 0.1307886568097981 -3 0.0756683349609375 1 Unmodified _VTEIDQDKY_ ENSG00000196924|ENST00000369850|FLNA;nc|ENSG00000196924|P21333-2|FLNA 61.60191391372663 0.0251951588191061 2 VTE{I|L}DQDKY 9 0 + 95.399 0.0 0.0 8.5982 8.5982 93.112 0.0 0.0 0.0 83.48767215588211 12.98332479720628 12.98332479720628 9.208187539523747 0 0.7742275032520141 2.0 0.4247425010840047 0.3054621874040891 + + VTE{I|L}DQDKY;VTE{I|L}D[AG]DKY;VTE{I|L}D{[NV]|[RG]}{[SA]|[TG]}Y 8.5982;7.7683;5.807 +;-;- + 169 + 1 2.009 46304.2 1.0 1518 3232 4751 DOHH2_400M_050219_2,4752 DOHH2_400M_050219_2,4752,VTEIDQDKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4753 24.421 268.0 261390.0 25 0 40998.0 -1 EATPMLKT 8 91 453.7335644178688 905.4525759025375 2 453.7332641482353 MULTI CID FTMS 0 0 0 4751 169590.546875 0.8231670460000865 -2 0.0542411804199218 2 Oxidation (M) _EATPM(Oxidation (M))LKT_ ENSG00000153310|ENST00000694912|CYRIB;ENSG00000197872|ENST00000381323|CYRIA;ENST00000469507.1_1_2:16742256-16742729:-|nuORF;ENST00000517801.5_1_8:130863079-130874553:-|nuORF;ENST00000523288.5_1_8:130864395-130891707:-|nuORF;nc|ENSG00000153310|Q9NUQ9-2|CYRIB 15.847184025352805 0.6768015514314958 2 {[CP]|[EA]}T 3 -1 15.062 0.0 0.0 1.6634 0.0 0.0 0.0 601.3023128012283 601.3023128012283 4.224213238899807 0.0 0.0 0.0 0 0.5 0.0 0.5 0.0 {[CP]|[EA]}T 1.6634 + + 70 1 2.009 60289.8 1.0 1519 3232 4751 DOHH2_400M_050219_2,4753 DOHH2_400M_050219_2,4753,EATPMLKT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4754 24.435 800.0 196600.0 25 0 19649.0 + 7225 EERAVIKAY 9 142 539.7978159276232 1077.5810789220463 2 539.7982665896416 MULTI CID FTMS 0 0 0 4751 131200.140625 1.0 0 0.0 3 Unmodified _EERAVIKAY_ ENSG00000184209|ENST00000526639|SNRNP35;nc|ENSG00000184209|Q16560-2|SNRNP35 34.40172386719151 0.1061884637610825 2 [K{I|L}]M[DP]{I|L}KAY 9 5 + 53.126 0.0 0.0 4.9302 4.9302 77.445 0.0 0.0 0.0 0.7378621416091846 43.293578219013824 0.7378621416091846 4.3933269383026285 0 1.5 0.0 1.0044321917401078 0.0 [K{I|L}]M[DP]{I|L}KAY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[DP]{I|L}KAY;[KP]{M(Oxidation (M))|F}[DP]{I|L}KAY;{[QN]|[E{I|L}]|[KN]}RW{I|L}KAY;[YQ][RH]{I|L}KAY;[QA]RRWKAY;[QA][KA]{I|L}{[DA]|[EG]}KAY;[K{I|L}]M[PS]{I|L}[VG]AY;[TA][RP]M{I|L}RAY;[K{I|L}][WE]{I|L}[VG]AY 4.9302;4.5225;4.2431;4.1852;3.5128;3.3969;2.8866;2.1881;2.0412;2.0247 -;-;-;-;-;-;-;-;-;- 706 1 2.009 121373.2 0.6100000143051147 1520 3232 4751 DOHH2_400M_050219_2,4754 DOHH2_400M_050219_2,4754,EERAVIKAY True True EERAVIKAY 24.435236 539.798266589642 540755.6875 4751.0 ENSG00000184209|ENST00000526639|SNRNP35;;nc|ENSG00000184209|Q16560-2|SNRNP35 0.9401996930440268 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4755 24.442 369.0 406640.0 25 0 146580.0 -1 0 101 530.3534833420039 529.3462068754038 1 530.3527099490166 MULTI CID FTMS 0 0 0 4751 312462.375 0.9817366164595198 -1 0.0085945129394531 4 2 HY 2 -1 17.959 0.0 0.0 3.3926 0.0 0.0 211.21316890170127 0.0 211.21316890170127 0.0 3.07651258738964 0.0 0.0 0 0.0 0.0 0.0 0.0 HY 3.3926 - 45 + 1 2.009 118287.0 1.0 1521 3232 4751 DOHH2_400M_050219_2,4755 DOHH2_400M_050219_2,4755, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4756 24.445 179.0 470030.0 25 0 135840.0 + 7084 EELPRCKE 8 95 502.2479464978512 0 502.2484924197197 PEAK CID FTMS 0 0 0 4751 202189.75 1.0 0 0.0 5 Unmodified _EELPRCKE_ REV__ENSG00000153201|ENST00000283195|RANBP2 7.910154910731844 0.5650536163073903 2 DV 2 -1 7.4743 0.0 0.0 0.74557 0.0 0.0 263.1305232673836 522.2306612604124 785.361184527796 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV 0.74557 - 16 + 1 2.009 68081.0 1.0 1522 3232 4751 DOHH2_400M_050219_2,4756 DOHH2_400M_050219_2,4756,EELPRCKE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4757 24.45 239.0 468290.0 25 0 63588.0 + 26878 PDELLVQHK 9 144 360.20158835451764 0 360.2007629275322 PEAK CID FTMS 0 0 0 4751 167525.859375 1.0 0 0.0 6 Unmodified _PDELLVQHK_ REV__ENSG00000132694|ENST00000368194|ARHGEF11;REV__ENST00000487682.5_1_1:156909888-156915005:-|nuORF;REV__nc|ENSG00000132694|O15085|ARHGEF11 7.910154910731844 0.3362437653303669 2 K 1 -1 8.2711 0.0 0.0 1.1513 0.0 0.0 359.2126727033728 228.05111108951408 587.2637837928869 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.2302046884880938 K 1.1513 + + 13 + 1 2.009 95880.9 1.0 1523 3232 4751 DOHH2_400M_050219_2,4757 DOHH2_400M_050219_2,4757,PDELLVQHK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4758 24.455 292.0 233320.0 25 0 9755.6 26117 NPPSGDER 8 116 436.2006400642729 870.3867271953458 2 436.2003356814384 MULTI CID FTMS 0 0 0 4751 162350.609375 1.0 0 0.0 7 Unmodified _NPPSGDER_ ENSG00000198908|ENST00000457056|GPRASP3 8.593279151180031 0.7721714526254883 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}ERY 6 6 + 27.638 0.0 0.0 3.1754 3.1754 79.5 0.0 0.0 0.0 17.549406363485858 11.682437647924218 11.682437647924218 13.364583001786643 0 0.25 0.0 0.2742275032520141 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}ERY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}Y{[RE]|[WV]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{M(Oxidation (M))|F}{[RE]|[WV]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[HD][VP] 3.1754;1.6399;0.97898;0.042409 -;-;-;- 69 + 1 2.009 59199.1 1.0 1524 3232 4751 DOHH2_400M_050219_2,4758 DOHH2_400M_050219_2,4758,NPPSGDER False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4760 24.463 294.0 304720.0 25 0 54564.0 24603 MLKYFATFE 9 82 575.2868837089234 1148.5592144846466 2 575.2870971560478 MULTI CID FTMS 0 0 0 4759 274710.0625 0.1960816949774375 5 -0.2064857482910156 1 Unmodified _MLKYFATFE_ ENSG00000108239|ENST00000225235|TBC1D12 15.847184025352805 0.4077185912009129 2 M[DV]R 4 8 20.445 0.0 0.0 1.7801 0.0 0.0 0.0 644.3194063775999 644.3194063775999 0.9813624419633272 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 M[DV]R 1.7801 - 72 + 1 2.009 74256.7 1.0 1525 3233 4759 DOHH2_400M_050219_2,4760 DOHH2_400M_050219_2,4760,MLKYFATFE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4761 24.477 800.0 146630.0 25 0 38023.0 + 36878 TENTEENRRFY 11 81 729.8341093778955 1457.653665822591 2 729.8334838747978 MULTI CID FTMS 0 0 0 4759 178691.4375 0.2835277854082105 4 -0.1480255126953125 2 Unmodified _TENTEENRRFY_ ENSG00000149925|ENST00000642816|ALDOA;ENST00000564521.6_1_16:30075769-30079042:+|nuORF;ENST00000566012.1_1_16:30077179-30079547:+|nuORF;nc|ENSG00000149925|P04075|ALDOA 11.631370582801994 0.793200706552726 2 {[NV]|[RG]}{I|L}GE[QP]E{[ET]|[MV]}M[DP] 13 11 + 20.907 0.0 0.0 1.4343 1.4343 65.653 0.0 0.0 0.0 1.8447201759159635 1.8447201759159635 1.8447201759159635 1.7609125905568064 0 0.5 0.0 0.0 0.4247425010840047 {[NV]|[RG]}{I|L}GE[QP]E{[ET]|[MV]}M[DP];{[NV]|[RG]}{I|L}EG[QP]E{[ET]|[MV]}M[DP];{[DS]|[MA]|[CV]|TT}PRG[QP]E{[ET]|[MV]}M[DP];{[DA]|[EG]}{I|L}RG[QP]E{[ET]|[MV]}M[DP];{[NV]|[RG]}{I|L}GE[QP]E{[ET]|[MV]}N[QT];{[NV]|[RG]}{I|L}EG[QP]E{[ET]|[MV]}N[QT];{[DS]|[MA]|[CV]|TT}PRG[QP]E{[ET]|[MV]}N[QT] 1.4343;1.3135;1.3078;0.60363;0.5934;0.47259;0.46684 -;-;-;-;-;-;- 453 1 2.009 86724.7 0.7099999785423279 1526 3233 4759 DOHH2_400M_050219_2,4761 DOHH2_400M_050219_2,4761,TENTEENRRFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4762 24.491 800.0 142100.0 25 0 7313.1 + 31839 RTENGGQVMY 10 133 577.7663360337874 1153.5181191343747 2 577.7670776247978 MULTI CID FTMS 0 0 0 4759 101097.78125 0.9031178796810208 1 -0.0353565216064453 3 Unmodified _RTENGGQVMY_ ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF 15.248480904072842 0.5916873121453583 2 QVMY 4 6 41.102 0.0 0.0 3.5632 0.0 0.0 614.2773304669937 0.0 614.2773304669937 0.0 30.13296575220324 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3807196863200844 + QVMY 3.5632 + + 52 1 2.009 89499.1 0.5600000023841858 1527 3233 4759 DOHH2_400M_050219_2,4762 DOHH2_400M_050219_2,4762,RTENGGQVMY False True RTENGGQVMY 24.490516 577.767077624798 28727630.0 4759.0 ENST00000491629.5_1_1:161011414-161013065:-|nuORF;;ENSG00000158773|ENST00000368021|USF1 5.930156230926514 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4764 24.499 315.0 162220.0 25 0 32762.0 16681 KENRPIRY 8 61 538.3034442365574 1074.5923355399148 2 538.3029052615166 MULTI CID FTMS 0 0 0 4763 62908.65625 0.658003019245607 1 -0.0593090057373046 1 Unmodified _KENRPIRY_ ENST00000468571.1_7:111617053-111644151:-|nuORF 2.577480529830294 0.808687252328423 2 Y 1 7 15.485 0.0 0.0 1.441 0.0 0.0 893.5182979196007 0.0 893.5182979196007 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.441 + + 13 + 1 2.009 48105.1 1.0 1528 3234 4763 DOHH2_400M_050219_2,4764 DOHH2_400M_050219_2,4764,KENRPIRY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4765 24.503 236.0 390160.0 25 0 25383.0 34298 SLRGIRVAE 9 100 500.7967407019304 999.5789284706608 2 500.7963439822197 MULTI CID FTMS 0 0 0 4763 276310.0625 0.7192995415218144 -1 0.0353565216064453 2 Unmodified _SLRGIRVAE_ ENSG00000074276|ENST00000261944|CDHR2 17.11289562659939 0.3734572693229295 2 EE 2 8 20.305 0.0 0.0 2.0314 0.0 0.0 723.4834827692921 0.0 723.4834827692921 0.0 9.035443825300636 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 EE 2.0314 - 526 + 1 2.009 72951.6 1.0 1529 3234 4763 DOHH2_400M_050219_2,4765 DOHH2_400M_050219_2,4765,SLRGIRVAE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4766 24.505 81.0 594340.0 25 0 79258.0 + 8421 ESHVHRCL 8 85 490.7394976337791 979.4644423343582 2 490.7397949099541 MULTI CID FTMS 0 0 0 4763 185394.5625 0.8928779203316966 2 -0.0664291381835937 3 Unmodified _ESHVHRCL_ REV__ENSG00000085117|ENST00000227155|CD82;REV__ENST00000529277.5_1_11:44587196-44640673:+|nuORF;REV__nc|ENSG00000085117|P27701-2|CD82 14.581692164780916 0.6954967302934248 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]RVA 7 -1 33.701 0.0 0.0 3.4408 0.0 0.0 0.0 160.9667555444751 160.9667555444751 20.6023506738292 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]RVA 3.4408 - 114 1 2.009 43367.6 1.0 1530 3234 4763 DOHH2_400M_050219_2,4766 DOHH2_400M_050219_2,4766,ESHVHRCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4767 24.512 401.0 346470.0 25 0 69152.0 + 44035 YIIQRKKEF 9 123 408.9077791621116 0 408.9077941775322 PEAK CID FTMS 0 0 0 4763 123319.1171875 0.9120495480269668 1 -0.0593090057373046 4 Unmodified _YIIQRKKEF_ ENSG00000161526|ENST00000584667|SAP30BP;ENST00000577292.5_1_17:73663452-73698652:+|nuORF;ENST00000580601.5_1_17:73689468-73702598:+|nuORF;ENST00000581207.5_1_17:73698601-73700918:+|nuORF;nc|ENSG00000161526|Q9UHR5-2|SAP30BP 16.565877749689598 0.2369545154010214 2 C(Carbamidomethyl (C)){I|L} 2 8 10.969 0.0 0.0 1.3446 0.0 0.0 407.6245642408169 132.04566370181877 539.6702279426356 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){I|L} 1.3446 - 45 + 1 2.009 111937.5 1.0 1531 3234 4763 DOHH2_400M_050219_2,4767 DOHH2_400M_050219_2,4767,YIIQRKKEF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4768 24.526 800.0 125030.0 25 0 7057.4 + -1 AEYYYQKYEDM 11 85 759.8082416873046 1517.6019304414092 2 759.8076660037041 MULTI CID FTMS 0 0 0 4763 105221.90625 0.6172340056955407 -1 0.0353565216064453 5 Oxidation (M) _AEYYYQKYEDM(Oxidation (M))_ REV__ENSG00000100626|ENST00000448469|GALNT16;REV__nc|ENSG00000100626|Q8N428-2|GALNT16 5.731851221503515 0.8481046878870278 2 [YE]E[PG]E{I|L}TAE 10 -1 75.667 0.0 0.0 4.986 0.0 0.0 0.0 396.0880791443241 396.0880791443241 57.88872836444014 0.0 0.0 0.0 0 0.0 2.0 2.9291746928241125 0.0 [YE]E[PG]E{I|L}TAE 4.986 - 2056 1 2.009 76073.0 0.5299999713897705 1532 3234 4763 DOHH2_400M_050219_2,4768 DOHH2_400M_050219_2,4768,AEYYYQKYEDM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4769 24.54 800.0 570850.0 25 0 78331.0 + 24684 MMDPNSTQRY 10 169 621.7656473858259 1241.5167418384517 2 621.7654907107353 MULTI CID FTMS 0 0 0 4763 247557.15625 0.0627281009904634 -6 0.2208309173583984 6 Unmodified _MMDPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 83.42873516780209 0.014257832770272 2 MMDPNSTQRY 10 0 + 116.95 0.0 0.0 9.4199 9.4199 89.35 0.0 0.0 0.0 75.4741868843681 12.01667520279372 12.01667520279372 6.020599913279625 0 0.9247425010840048 1.6989700043360187 0.7302046884880937 1.555462187404089 + + MMDPNSTQRY;MMDPNTSQRY;MMDPNST[AG]RY;MMDPGGSTQRY;MMDPNST[KT]MS;MMDPGGTSQRY;MMDPNTS[AG]RY;MMDPGGST[AG]RY;MMDPNTS[KT]MS;MMDPNST[HV]PN 9.4199;8.935;8.6817;8.6817;8.3565;8.1968;8.1968;7.9465;7.8716;7.7594 +;-;-;-;-;-;-;-;-;- + 6051 + 1 2.009 325377.8 0.8899999856948853 1533 3234 4763 DOHH2_400M_050219_2,4769 DOHH2_400M_050219_2,4769,MMDPNSTQRY True True MMDPNSTQRY 24.539671 621.765490710735 45986660.0 4763.0 ENSG00000124571|ENST00000265351|XPO5 9.740304311116535 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4770 24.55 585.0 171940.0 25 0 14089.0 + 29906 QSDPTQSGMY 10 137 565.2266674216056 1128.4387819100111 2 565.2256957888603 MULTI CID FTMS 0 0 0 4763 152317.125 0.5956593225430288 -1 0.0353565216064453 7 Oxidation (M) _QSDPTQSGM(Oxidation (M))Y_ ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1 99.7552728972412 0.0086345419122624 2 [WC(Carbamidomethyl (C))]GSQQ[NS]Y 9 7 + 53.121 0.0 0.0 4.7075 4.7075 78.284 0.0 0.0 0.0 6.228758756270871 6.228758756270871 6.228758756270871 6.228758756270871 0 0.0 0.0 0.3494850021680094 1.075257498915995 [WC(Carbamidomethyl (C))]GSQQ[NS]Y;[TP]QSDQSG{M(Oxidation (M))|F}Y;{[QS]|[NT]}D[TP]QSG{M(Oxidation (M))|F}Y;[WC(Carbamidomethyl (C))]GSQ[TP]MY;[WC(Carbamidomethyl (C))]GS[AG]Q[NS]Y;[WC(Carbamidomethyl (C))]GSQ[AG][NS]Y;{[QS]|[NT]}[TP]DQSG{M(Oxidation (M))|F}Y;[WC(Carbamidomethyl (C))]G[RP]SG{M(Oxidation (M))|F}Y;[AG]TPSDQSG{M(Oxidation (M))|F}Y;[TP]QSD[AG]SG{M(Oxidation (M))|F}Y 4.7075;4.1555;4.1307;4.0643;3.8915;3.8915;3.8522;3.6857;3.4895;3.3434 -;-;+;-;-;-;-;-;-;- + 1201 + 1 2.009 78238.0 1.0 1534 3234 4763 DOHH2_400M_050219_2,4770 DOHH2_400M_050219_2,4770,QSDPTQSGMY True False QSDPTQSGMY 24.549913 565.22569578886 2525905.0 4763.0 nc|ENSG00000105856|O60381-3|HBP1;;ENSG00000105856|ENST00000222574|HBP1;;nc|ENSG00000105856|O60381-2|HBP1 10.033132553100586 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4772 24.554 19.0 1701300.0 25 0 172100.0 -1 SGDCFADLAC 10 65 558.2097899608096 1114.4050269884192 2 558.2098876833916 MULTI CID FTMS 0 0 0 4771 2007392.75 0.3743045278723533 2 -0.0533599853515625 1 2 Carbamidomethyl (C) _SGDC(Carbamidomethyl (C))FADLAC(Carbamidomethyl (C))_ ENSG00000145147|ENST00000504154|SLIT2;nc|ENSG00000145147|O94813-2|SLIT2;nc|ENSG00000145147|O94813-3|SLIT2 19.256988751693697 0.5244284437930726 2 TT{I|L}HY 5 -1 38.756 0.0 0.0 3.4777 0.0 0.0 481.0927063515272 0.0 481.0927063515272 0.0 3.4209190344287066 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TT{I|L}HY 3.4777 - 81 + 1 2.002 31119.8 1.0 1535 3235 4771 DOHH2_400M_050219_2,4772 DOHH2_400M_050219_2,4772,SGDCFADLAC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4773 24.557 130.0 483530.0 25 0 34754.0 5407 DLLAWWPNPQ 10 82 620.3132283273969 1238.6119037215938 2 620.3138305544853 MULTI CID FTMS 0 0 0 4771 497780.4375 0.6649031336945441 26 -0.9837169647216796 2 Unmodified _DLLAWWPNPQ_ ENSG00000160161|ENST00000291495|CILP2 13.90604991867851 0.6142120002215601 2 {[HG]|PP}AMPPPPP 9 7 64.447 0.0 0.0 5.2032 0.0 0.0 0.0 354.13879516130004 354.13879516130004 45.31743128760553 0.0 0.0 0.0 0 2.610924374808178 0.0 0.0 0.0 {[HG]|PP}AMPPPPP 5.2032 - 945 1 2.002 51170.4 1.0 1536 3235 4771 DOHH2_400M_050219_2,4773 DOHH2_400M_050219_2,4773,DLLAWWPNPQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4775 24.561 71.0 994340.0 25 0 120460.0 + 38242 TPVIIPASQY 10 82 363.5380422388536 1087.5922973167608 3 363.5376159548759 MULTI CID FTMS 0 0 0 4774 536901.0625 0.62491976099689 -1 0.007120132446289 1 Unmodified _TPVIIPASQY_ REV__ENSG00000075151|ENST00000602326|EIF4G3;REV__nc|ENSG00000075151|O43432-2|EIF4G3;REV__nc|ENSG00000075151|O43432-3|EIF4G3;REV__nc|ENSG00000075151|O43432-4|EIF4G3;REV__nc|ENSG00000075151|O43432|EIF4G3 15.847184025352805 0.5816416552707754 2 [HC]PTV{I|L}KKY 9 -1 + 51.018 0.0 0.0 4.6909 4.6909 87.517 0.0 0.0 0.0 31.83153580401484 11.27121139309525 11.27121139309525 51.01783263018984 0 0.3807196863200844 0.0 0.0 0.0 [HC]PTV{I|L}KKY 4.6909 - 55 + 1 2.002 65358.5 1.0 1537 3236 4774 DOHH2_400M_050219_2,4775 DOHH2_400M_050219_2,4775,TPVIIPASQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4776 24.563 69.0 748240.0 25 0 60470.0 + 32938 SELGSETRY 9 85 521.246208013657 1040.477863094114 2 521.2462646365166 MULTI CID FTMS 0 0 0 4774 459913.71875 0.9153853584135436 -1 0.007120132446289 2 Unmodified _SELGSETRY_ ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1 24.99096001346401 0.2132109383330889 2 {[ES]|[DT]|[{I|L}C]}{I|L}GS[W{I|L}]SY 9 3 + 35.128 0.0 0.0 3.3762 3.3762 73.81 0.0 0.0 0.0 18.674771601701188 5.686362358410129 5.686362358410129 6.197887582883944 0 0.5 0.0 0.3807196863200844 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}GS[W{I|L}]SY;{[ES]|[DT]|[{I|L}C]}{I|L}GS[DV][TA]Y;{[ES]|[DT]|[{I|L}C]}{I|L}GSE[HV][PS];{[ES]|[DT]|[{I|L}C]}{I|L}[CS][RP]SY;{[ES]|[DT]|[{I|L}C]}[R{M(Oxidation (M))|F}][RP]SY;{[ES]|[DT]|[{I|L}C]}{I|L}[CS][YR][PS] 3.3762;2.7805;2.2019;2.0326;1.0441;0.23051 -;-;-;-;-;- 88 + 1 2.002 43154.9 1.0 1538 3236 4774 DOHH2_400M_050219_2,4776 DOHH2_400M_050219_2,4776,SELGSETRY False True SELGSETRY 24.563133 521.246264636517 2210804.0 4774.0 nc|ENSG00000163374|Q9H869-6|YY1AP1;;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;;nc|ENSG00000163374|Q9H869-8|YY1AP1;;nc|ENSG00000163374|Q9H869|YY1AP1;;nc|ENSG00000163374|Q9H869-9|YY1AP1;;ENSG00000163374|ENST00000355499|YY1AP1;;nc|ENSG00000163374|Q9H869-4|YY1AP1;;nc|ENSG00000163374|Q9H869-7|YY1AP1;;nc|ENSG00000163374|Q9H869-5|YY1AP1;;nc|ENSG00000163374|Q9H869-3|YY1AP1;;ENST00000442834.6_1_1:155629450-155640310:-|nuORF 6.0109602610270185 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4777 24.565 88.0 620220.0 25 0 88661.0 + 7114 EEMKQIKE 8 82 517.7610680314449 1033.5075831296897 2 517.7616454958916 MULTI CID FTMS 0 0 0 4774 298250.5625 0.8413141965861255 1 -0.0462398529052734 3 Unmodified _EEMKQIKE_ REV__ENSG00000128487|ENST00000395527|SPECC1;REV__nc|ENSG00000128487|Q5M775-2|SPECC1;REV__nc|ENSG00000128487|Q5M775-3|SPECC1;REV__nc|ENSG00000128487|Q5M775-4|SPECC1;REV__nc|ENSG00000128487|Q5M775-5|SPECC1 13.50788311687929 0.7113601687236069 2 EE[K{I|L}]Y 5 -1 19.494 0.0 0.0 1.8862 0.0 0.0 0.0 368.1455680002545 368.1455680002545 2.1124969033938577 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.0 EE[K{I|L}]Y 1.8862 - 132 1 2.002 46980.0 1.0 1539 3236 4774 DOHH2_400M_050219_2,4777 DOHH2_400M_050219_2,4777,EEMKQIKE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4778 24.57 281.0 310180.0 25 0 26240.0 + 34484 SMLKHQTL 8 112 479.26335419120926 956.5121554492184 2 479.2633849978447 MULTI CID FTMS 0 0 0 4774 297473.5625 0.6099960321101741 -1 0.007120132446289 4 Unmodified _SMLKHQTL_ ENSG00000105364|ENST00000253099|MRPL4 66.45667989310934 0.1167381424463928 2 SM{I|L}KQHT{I|L} 8 2 + 74.449 0.0 0.0 7.7834 7.7834 92.912 0.0 0.0 0.0 60.03261100997573 12.914930551903218 12.914930551903218 9.262137858390815 0 1.274227503252014 2.0 1.079689690656103 0.0 SM{I|L}KQHT{I|L};SM{I|L}K[AG]HT{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}KHQT{I|L};SM{I|L}K[WP][VP];{[MS]|[{M(Oxidation (M))|F}A]}{I|L}KH[AG]T{I|L};[HK]NV[{M(Oxidation (M))|F}V]T{I|L};[HK]GGV[{M(Oxidation (M))|F}V]T{I|L};[HQ]{I|L}K{[MS]|[{M(Oxidation (M))|F}A]}T{I|L};S[YV][HK]Q[VP] 7.7834;6.8151;4.8189;4.2148;3.8506;1.4203;0.452;0.20264;0.066373 -;-;+;-;-;-;-;-;- + 351 + 1 2.002 71192.9 1.0 1540 3236 4774 DOHH2_400M_050219_2,4778 DOHH2_400M_050219_2,4778,SMLKHQTL True True SMLKHQTL 24.570265 479.263384997845 1688532.75 4774.0 ENSG00000105364|ENST00000253099|MRPL4 5.319272359212239 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4779 24.574 210.0 355290.0 25 0 44187.0 + 23210 SLNSKPSSL 9 116 466.75629747763776 931.4980420220757 2 466.7561828494072 MULTI CID FTMS 0 0 0 4774 218871.125 0.4533982913624996 7 -0.2856388092041015 5 Unmodified _LSSNKDVGI_ nc|ENSG00000118308|Q12912|IRAG2;ENSG00000118308|ENST00000556887|IRAG2;chr12:25052956-25063720|41|17.37|0.82|4.41|+|ENST00000547044|IRAG2,IRAG2 19.256988751693697 0.3154191944385105 2 {[TV]|[{I|L}S]}NSK[DV]G{I|L} 9 2 + 43.165 0.0 0.0 4.6339 4.6339 76.277 0.0 0.0 0.0 19.92130348985437 4.480623046351617 4.480623046351617 4.598640802139251 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}NSK[DV]G{I|L};{[TV]|[{I|L}S]}NSK[PS]S{I|L};{[TV]|[{I|L}S]}GGSK[DV]G{I|L};{[TV]|[{I|L}S]}GGSK[PS]S{I|L};{[TV]|[{I|L}S]}NSAA{[TV]|[{I|L}S]}G{I|L};{[TV]|[{I|L}S]}NSAAG{I|L}S{I|L};{[TV]|[{I|L}S]}N[QT]{[TV]|[{I|L}S]}G{I|L};{[TV]|[{I|L}S]}N[QT]G{I|L}S{I|L};Q[VS]SK[DV]G{I|L};Q[VS]SK[PS]S{I|L} 4.6339;4.1403;3.6454;3.1517;2.6759;2.4431;2.2978;2.065;2.0309;1.5372 -;-;-;-;-;-;-;-;-;- 152 + 1 2.002 65494.2 1.0 1541 3236 4774 DOHH2_400M_050219_2,4779 DOHH2_400M_050219_2,4779,LSSNKDVGI False False SLNSKPSSL 24.574238 466.756182849407 3451085.0 4774.0 nc|ENSG00000118308|Q12912|IRAG2;;ENSG00000118308|ENST00000556887|IRAG2;;chr12:25052956-25063720|41|17.37|0.82|4.41|+|ENST00000547044|IRAG2,IRAG2 2.8274598916371665 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4780 24.588 800.0 246540.0 25 0 27311.0 + 37443 TLDHRLNDSY 10 132 617.2964059199126 1232.578258906625 2 617.2956420779228 MULTI CID FTMS 0 0 0 4774 185716.765625 0.3137845278867825 -3 0.101785659790039 6 Unmodified _TLDHRLNDSY_ ENSG00000081803|ENST00000449022|CADPS2;ENSG00000163618|ENST00000383710|CADPS;ENST00000490424.1_1_3:62521978-62535788:-|nuORF;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS 128.5786326129116 0.0002163543161949 2 [{I|L}T]DHR{I|L}NDSY 10 0 + 103.29 0.0 0.0 8.3797 8.3797 91.796 0.0 0.0 0.0 22.29696243879616 73.9350781693193 22.29696243879616 9.164539485499247 0 2.5669015600442577 2.0 1.2728787452803376 0.5994850021680094 + + [{I|L}T]DHR{I|L}NDSY;[{I|L}T]DH[VG]{I|L}NDSY;[{I|L}T]DHR{I|L}GGDSY;[{I|L}T]DHQQ{[QN]|[E{I|L}]|[KN]}SY;[{I|L}T]DHR[SG]PTSY;[{I|L}T]DH[VG]{I|L}GGDSY;[{I|L}T]D[RN][H{I|L}]DSY;[{I|L}T]DHQQD[{I|L}T]Y;[{I|L}T]DH[HT]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SY;T{I|L}DH[SG]R{[RE]|[WV]}Y 8.3797;7.6361;7.6361;6.948;6.6923;6.4092;6.3788;6.2785;5.9556;5.8992 +;-;-;-;-;-;-;-;-;- + 3158 1 2.002 145357.2 0.7799999713897705 1542 3236 4774 DOHH2_400M_050219_2,4780 DOHH2_400M_050219_2,4780,TLDHRLNDSY True True TLDHRLNDSY 24.588075 617.295642077923 7334272.75 4774.0 nc|ENSG00000081803|Q86UW7-3|CADPS2;;ENSG00000081803|ENST00000449022|CADPS2;;ENST00000490424.1_1_3:62521978-62535788:-|nuORF;;nc|ENSG00000163618|Q9ULU8-4|CADPS;;ENSG00000163618|ENST00000383710|CADPS;;nc|ENSG00000163618|Q9ULU8-3|CADPS;;nc|ENSG00000081803|Q86UW7-2|CADPS2 7.055004437764485 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4781 24.592 213.0 377620.0 25 0 83243.0 -1 0 70 504.30093230907136 503.29365584247137 1 504.2992431521416 MULTI CID FTMS 0 0 0 4774 161436.640625 0.840437543940793 5 -0.2200756072998047 7 2 Y 1 -1 13.495 0.0 0.0 2.6813 0.0 0.0 322.2196639985245 0.0 322.2196639985245 0.0 1.712113404111033 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.6813 - 15 + 1 2.002 69119.3 1.0 1543 3236 4774 DOHH2_400M_050219_2,4781 DOHH2_400M_050219_2,4781, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4782 24.603 639.0 197630.0 25 0 59517.0 -1 0 116 508.29435662584353 507.28708015924354 1 508.2938415408134 MULTI CID FTMS 0 0 0 4774 116006.2890625 0.4773154071169115 7 -0.2856388092041015 8 2 Y 1 -1 14.604 0.0 0.0 2.8789 0.0 0.0 326.21260003404666 0.0 326.21260003404666 0.0 3.535437791373033 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.8789 - 50 + 1 2.002 102159.1 1.0 1544 3236 4774 DOHH2_400M_050219_2,4782 DOHH2_400M_050219_2,4782, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4784 24.619 800.0 183700.0 25 0 24048.0 + 29908 QSDPTQSGMY 10 107 1113.4529617922626 1112.445685325663 1 1115.461230456829 MULTI CID FTMS 0 0 0 4783 90575.734375 1.0 0 0.0 1 Unmodified _QSDPTQSGMY_ ENSG00000105856|ENST00000222574|HBP1;nc|ENSG00000105856|O60381-2|HBP1;nc|ENSG00000105856|O60381-3|HBP1 37.07464296494664 0.1884581770199685 2 [TP]QSDGAQ[Y{M(Oxidation (M))|F}] 10 6 + 69.406 0.0 0.0 6.2391 6.2391 79.465 0.0 0.0 0.0 10.0 2.2969624387961574 2.2969624387961574 2.156818820794939 0 0.2887254899964357 1.6989700043360187 1.534318117920506 1.2302046884880935 [TP]QSDGAQ[Y{M(Oxidation (M))|F}];[TP]QSDQQ[Y{M(Oxidation (M))|F}];[TP]QSDGA[AG][Y{M(Oxidation (M))|F}];[QP]TSDGAQ[Y{M(Oxidation (M))|F}];[TP]QSDQ[AG][Y{M(Oxidation (M))|F}];[QP]TSDQQ[Y{M(Oxidation (M))|F}];[TP][AG]SDQQ[Y{M(Oxidation (M))|F}];[TP][AG]SDGAQ[Y{M(Oxidation (M))|F}];[QP]TSDGA[AG][Y{M(Oxidation (M))|F}];[QP]TSDQ[AG][Y{M(Oxidation (M))|F}] 6.2391;6.0452;5.4153;5.3402;5.2175;5.1463;4.768;4.584;4.5163;4.3185 -;-;-;-;-;-;-;-;-;- 1545 1 2.002 96052.6 0.4300000071525574 1545 3237 4783 DOHH2_400M_050219_2,4784 DOHH2_400M_050219_2,4784,QSDPTQSGMY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4785 24.622 117.0 584660.0 25 0 182250.0 -1 0 80 490.28294588126175 489.27566941466176 1 490.2808715701103 MULTI CID FTMS 0 0 0 4783 400508.46875 0.6595824297461269 2 -0.0900459289550781 2 2 [RV]C{I|L} 4 -1 + 13.188 0.0 0.0 2.6953 2.6953 78.24 0.0 0.0 0.0 1.1978875828839364 2.703037561203842 1.1978875828839364 11.760912590556812 0 0.0 0.0 0.0 0.0 [RV]C{I|L};{[QN]|[E{I|L}]|[KN]}[KT] 2.6953;0.29159 -;- 11 + 1 2.002 59317.6 1.0 1546 3237 4783 DOHH2_400M_050219_2,4785 DOHH2_400M_050219_2,4785, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4786 24.625 144.0 575170.0 25 0 105670.0 + 5463 DLRGRTAL 8 85 451.2647905513406 900.5150281694812 2 451.2643615603447 MULTI CID FTMS 0 0 0 4783 345667.875 0.5278469132229962 -2 0.0533599853515625 3 Unmodified _DLRGRTAL_ ENSG00000139645|ENST00000267116|ANKRD52 26.88365393820708 0.4786498634179528 2 D{I|L}R[WK]A{I|L} 7 3 + 63.817 0.0 0.0 7.0867 7.0867 83.152 0.0 0.0 0.0 47.78614465405767 10.75720713938118 10.75720713938118 3.0102999566398125 0 0.2614393726401688 2.0 0.0 0.4247425010840047 D{I|L}R[WK]A{I|L};{I|L}DR[WK]A{I|L} 7.0867;6.7524 -;- 140 + 1 2.002 72806.0 1.0 1547 3237 4783 DOHH2_400M_050219_2,4786 DOHH2_400M_050219_2,4786,DLRGRTAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4787 24.627 135.0 527440.0 25 0 60493.0 + 37445 TLDHRLNDSY 10 94 411.8667879663065 1232.578534499119 3 411.8666869997978 MULTI CID FTMS 0 0 0 4783 302425.84375 0.7230192949296523 -2 0.0533599853515625 4 Unmodified _TLDHRLNDSY_ ENSG00000081803|ENST00000449022|CADPS2;ENSG00000163618|ENST00000383710|CADPS;ENST00000490424.1_1_3:62521978-62535788:-|nuORF;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS 18.373094154950223 0.5392593366289069 2 [{I|L}T]D[RH]{[QV]|[N{I|L}]|[RA]|[KV]}DSY 10 0 + 39.494 0.0 0.0 3.2041 3.2041 81.567 0.0 0.0 0.0 6.75846205488881 18.551434250963936 6.75846205488881 24.471580313422194 0 0.3807196863200844 2.0 0.0 0.0 + + [{I|L}T]D[RH]{[QV]|[N{I|L}]|[RA]|[KV]}DSY;{NN|[MP]|[D{I|L}]|[EV]}T[RH]{[QV]|[N{I|L}]|[RA]|[KV]}DSY;{NN|[MP]|[D{I|L}]|[EV]}T[RH][WR]SY 3.2041;1.2187;0.44456 +;-;- + 161 1 2.002 59888.4 1.0 1548 3237 4783 DOHH2_400M_050219_2,4787 DOHH2_400M_050219_2,4787,TLDHRLNDSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4788 24.63 129.0 622710.0 25 0 50066.0 -1 0 92 382.2099276493951 381.2026511827951 1 383.2179443240166 MULTI CID FTMS 0 0 0 4783 272923.25 1.0 0 0.0 5 2 Y 1 -1 13.495 0.0 0.0 3.5401 0.0 0.0 200.1281710575982 0.0 200.1281710575982 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.5401 - 23 + 1 2.002 69630.0 1.0 1549 3237 4783 DOHH2_400M_050219_2,4788 DOHH2_400M_050219_2,4788, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4789 24.634 204.0 349500.0 25 0 49554.0 + 6836 EEDEDAYKKQF 11 92 467.87729473046335 1400.61005479159 3 467.8772765994072 MULTI CID FTMS 0 0 0 4783 236310.921875 0.9893342332732776 -2 0.0533599853515625 6 Unmodified _EEDEDAYKKQF_ ENSG00000122406|ENST00000370321|RPL5 31.461819360018414 0.353469500117032 2 DAYKKQ{M(Oxidation (M))|F} 7 4 39.97 0.0 0.0 2.8538 0.0 0.0 502.1560825855863 0.0 502.1560825855863 0.0 21.0425788214684 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.6549471895720985 + DAYKKQ{M(Oxidation (M))|F} 2.8538 + + 271 + 1 2.002 64076.3 1.0 1550 3237 4783 DOHH2_400M_050219_2,4789 DOHH2_400M_050219_2,4789,EEDEDAYKKQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4790 24.648 800.0 185740.0 25 0 26249.0 + 24681 MMDPNSTQRY 10 115 629.7628004258117 1257.5110479184234 2 629.7633544802666 MULTI CID FTMS 0 0 0 4783 160903.125 0.4817832070074291 -3 0.1126689910888671 7 Oxidation (M) _M(Oxidation (M))MDPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 83.42873516780209 0.014257832770272 2 M{M(Oxidation (M))|F}DPNSTQRY 10 0 + 93.751 0.0 0.0 7.4553 7.4553 80.646 0.0 0.0 0.0 79.93863182545937 12.087915664501525 12.087915664501525 0.5237875363565792 0 1.0 0.0 0.7302046884880937 1.4876954943324543 + + M{M(Oxidation (M))|F}DPNSTQRY;{M(Oxidation (M))|F}MDPNSTQRY;M{M(Oxidation (M))|F}DPGGSTQRY;M{M(Oxidation (M))|F}DPNST[AG]RY;{M(Oxidation (M))|F}MDPGGSTQRY;{M(Oxidation (M))|F}MDPNST[AG]RY;M{M(Oxidation (M))|F}DPGGST[AG]RY;{M(Oxidation (M))|F}MDPGGST[AG]RY;M{M(Oxidation (M))|F}DPN[C(Carbamidomethyl (C))R]RY;{M(Oxidation (M))|F}MDPN[C(Carbamidomethyl (C))R]RY 7.4553;7.4136;6.7265;6.7265;6.6848;6.6848;6.0006;5.9589;5.3814;5.3397 +;+;-;-;-;-;-;-;-;- + 899 + 1 2.002 111796.9 0.7200000286102295 1551 3237 4783 DOHH2_400M_050219_2,4790 DOHH2_400M_050219_2,4790,MMDPNSTQRY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4791 24.662 800.0 173570.0 25 0 25290.0 + 23812 LVEFQQPNL 9 155 544.2938907169424 0 544.2942993044853 PEAK CID FTMS 0 0 0 4783 141539.734375 1.0 0 0.0 8 Unmodified _LVEFQQPNL_ REV__ENSG00000134910|ENST00000392708|STT3A;REV__ENST00000525431.1_1_11:125476222-125478225:+|nuORF;REV__ENST00000531001.1_1_11:125478078-125479612:+|nuORF;REV__ENST00000534472.5_1_11:125465789-125479519:+|nuORF;REV__nc|ENSG00000134910|P46977-2|STT3A 20.453626601364224 0.1969592619112565 2 WAQ 3 -1 13.778 0.0 0.0 1.268 0.0 0.0 213.155517174316 485.2359332866708 698.3914504609868 0.0 0.0 0.0 0.0 0 0.1694451763165201 0.0 0.0 0.7302046884880937 WAQ 1.268 - 189 + 1 2.002 107570.4 0.6800000071525574 1552 3237 4783 DOHH2_400M_050219_2,4791 DOHH2_400M_050219_2,4791,LVEFQQPNL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4793 24.679 800.0 86636.0 25 0 7140.0 + 6837 EEDEDAYKKQF 11 102 701.3128598173524 1400.6111667015048 2 701.3113891482353 MULTI CID FTMS 0 0 0 4792 43763.90234375 0.4096135821569336 -1 0.0584602355957031 1 Unmodified _EEDEDAYKKQF_ ENSG00000122406|ENST00000370321|RPL5 70.32083430771065 0.0314747710216561 2 EEDEDAYKKQ{M(Oxidation (M))|F} 11 0 + 76.221 0.0 0.0 5.442 5.442 79.413 0.0 0.0 0.0 22.59637310505757 4.5941730742341065 4.5941730742341065 4.5941730742341065 0 1.174742501084005 1.5228787452803376 0.5 0.3054621874040891 + + EEDEDAYKKQ{M(Oxidation (M))|F};EEDEDAYKK{M(Oxidation (M))|F}Q;EEDEWYKKQ{M(Oxidation (M))|F};EEDEWYKK{M(Oxidation (M))|F}Q;EEDEDAYKK[AG]{M(Oxidation (M))|F};EEDEWYKK[AG]{M(Oxidation (M))|F};EEDE{[QS]|[NT]}[YV]KQ{M(Oxidation (M))|F};EEDE{[QS]|[NT]}[YV]K{M(Oxidation (M))|F}Q;KK{[QC]|[C(Carbamidomethyl (C))A]}[QP]WED[HC] 5.442;5.114;4.9725;4.6445;4.5721;4.1001;3.0486;2.7206;0.65767 +;-;-;-;-;-;-;-;- + 304 + 1 2.001 56326.1 0.5699999928474426 1553 3238 4792 DOHH2_400M_050219_2,4793 DOHH2_400M_050219_2,4793,EEDEDAYKKQF True True EEDEDAYKKQF 24.67911 701.311389148235 2392538.0625 4792.0 ENSG00000122406|ENST00000370321|RPL5 9.726548194885254 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4794 24.681 108.0 456560.0 25 0 90017.0 + 45451 YTDVSTRY 8 64 502.7374149093436 0 502.7372619509697 PEAK CID FTMS 0 0 0 4792 326158.125 1.0 0 0.0 2 Unmodified _YTDVSTRY_ ENSG00000213593|ENST00000278422|TMX2;ENST00000436507.2_1_9:37885847-37886384:+|nuORF;nc|ENSG00000213593|Q9Y320-2|TMX2 17.11289562659939 0.4616013407964878 2 TDV 3 5 20.317 0.0 0.0 2.0247 0.0 0.0 163.06337854739974 522.2327766427018 685.2961551901014 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 + TDV 2.0247 + + 27 + 1 2.001 43830.0 1.0 1554 3238 4792 DOHH2_400M_050219_2,4794 DOHH2_400M_050219_2,4794,YTDVSTRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4795 24.685 192.0 595310.0 25 0 95322.0 + 5232 DIYSKKTL 8 96 484.27636533175365 966.5381777303072 2 484.2757751345634 MULTI CID FTMS 0 0 0 4792 285661.65625 0.1430105566420599 -4 0.1711292266845703 3 Unmodified _DIYSKKTL_ ENSG00000173473|ENST00000254480|SMARCC1;ENST00000483847.1_1_3:47712102-47719818:-|nuORF 41.8396318013385 0.2035142800366642 2 {NN|[MP]|[D{I|L}]|[EV]}YSKKT{I|L} 8 0 + 63.837 0.0 0.0 6.6047 6.6047 91.939 0.0 0.0 0.0 33.20953934504945 12.603417687809497 12.603417687809497 14.477437731477425 0 0.6989700043360187 2.0 0.9715141619232908 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}YSKKT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[HQ]KT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}HK[WR];[KS]YKT{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[{M(Oxidation (M))|F}C]|[YS]}KKT{I|L}{NN|[MP]|[D{I|L}]|[EV]};KKSYT{I|L}{NN|[MP]|[D{I|L}]|[EV]};[KS]KYT{I|L}{NN|[MP]|[D{I|L}]|[EV]};KKSTY{I|L}{NN|[MP]|[D{I|L}]|[EV]};[KS]KTY{I|L}{NN|[MP]|[D{I|L}]|[EV]};KKST{I|L}Y{NN|[MP]|[D{I|L}]|[EV]} 6.6047;5.1069;3.3356;2.227;1.9156;1.7288;1.5996;1.2507;1.1214;0.83899 +;-;-;-;-;-;-;-;-;- + 316 + 1 2.001 93320.4 1.0 1555 3238 4792 DOHH2_400M_050219_2,4795 DOHH2_400M_050219_2,4795,DIYSKKTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4796 24.688 142.0 415420.0 25 0 74280.0 29425 QLETSRREM 9 85 383.8606431622055 1148.5601000868166 3 383.8606140017509 MULTI CID FTMS 0 0 0 4792 257522.0625 0.084585613219845 10 -0.3738174438476562 4 Unmodified _QLETSRREM_ ENSG00000117155|ENST00000342203|SSX2IP;ENST00000460500.1_1_1:85128136-85135573:-|nuORF;nc|ENSG00000117155|Q9Y2D8-2|SSX2IP;nc|ENSG00000117155|Q9Y2D8-3|SSX2IP 6.723162845929126 0.6799819581413107 2 M 1 8 14.604 0.0 0.0 1.2715 0.0 0.0 999.5085081452136 0.0 999.5085081452136 0.0 1.1607435312808434 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 1.2715 + + 12 + 1 2.001 52272.5 1.0 1556 3238 4792 DOHH2_400M_050219_2,4796 DOHH2_400M_050219_2,4796,QLETSRREM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4797 24.69 106.0 526420.0 25 0 78348.0 + 22794 LQSSTKKNQ 9 90 517.284729685848 0 517.2852661013603 PEAK CID FTMS 0 0 0 4792 209325.984375 0.5676069257481031 3 -0.1153755187988281 5 Unmodified _LQSSTKKNQ_ REV__ENSG00000122728|ENST00000242310|TAF1L;REV__ENSG00000147133|ENST00000423759|TAF1;REV__nc|ENSG00000147133|P21675-1|TAF1;REV__nc|ENSG00000147133|P21675-13|TAF1;REV__nc|ENSG00000147133|P21675-15|TAF1;REV__nc|ENSG00000147133|P21675-16|TAF1;REV__nc|ENSG00000147133|P21675-17|TAF1;REV__nc|ENSG00000147133|P21675-18|TAF1;REV__nc|ENSG00000147133|P21675-19|TAF1;REV__nc|ENSG00000147133|P21675-20|TAF1;REV__nc|ENSG00000147133|P21675-21|TAF1;REV__nc|ENSG00000147133|P21675-22|TAF1;REV__nc|ENSG00000147133|P21675-23|TAF1;REV__nc|ENSG00000147133|P21675-24|TAF1;REV__nc|ENSG00000147133|P21675-25|TAF1;REV__nc|ENSG00000147133|P21675|TAF1 7.289230182591677 0.3433663536648894 2 A 1 -1 3.9794 0.0 0.0 0.38539 0.0 0.0 551.2915835398616 407.2038363092407 958.4954198491024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.38539 - 13 + 1 2.001 48232.4 1.0 1557 3238 4792 DOHH2_400M_050219_2,4797 DOHH2_400M_050219_2,4797,LQSSTKKNQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4798 24.693 152.0 648270.0 25 0 71065.0 19743 LGPRNEGALL 10 98 520.2962737822771 1038.5779946313542 2 520.2974120974541 MULTI CID FTMS 0 0 0 4792 344278.15625 0.7163212370381394 -2 0.1047000885009765 6 Unmodified _LGPRNEGALL_ nc|ENSG00000112078|Q7Z5Y7-2|KCTD20 13.042465956692816 0.6287021003332052 2 {[VA]|[{I|L}G]}PT 4 7 20.445 0.0 0.0 1.9686 0.0 0.0 0.0 667.353711635251 667.353711635251 -3.276892790046233 0.0 -3.276892790046233 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[VA]|[{I|L}G]}PT 1.9686 - 234 + 1 2.001 84662.8 1.0 1558 3238 4792 DOHH2_400M_050219_2,4798 DOHH2_400M_050219_2,4798,LGPRNEGALL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 4800 24.698 19.0 2108100.0 25 0 150930.0 + 42415 VTEIDQDKY 9 68 555.7697469783673 1109.5249410235344 2 555.7693359255791 MULTI CID FTMS 0 0 0 4799 2708831.0 0.2502617333789603 4 -0.14935302734375 1 Unmodified _VTEIDQDKY_ ENSG00000196924|ENST00000369850|FLNA;nc|ENSG00000196924|P21333-2|FLNA 70.33199760932243 0.0209706178985989 2 VTE{I|L}DQDKY 9 0 + 94.066 0.0 0.0 8.478 8.478 93.042 0.0 0.0 0.0 81.84746300564576 11.382805414149786 11.382805414149786 9.208187539523747 0 0.7742275032520141 2.0 0.7742275032520141 0.4247425010840047 + + VTE{I|L}DQDKY;VTE{I|L}D[AG]DKY 8.478;7.6481 +;- + 201 + 1 2.001 40068.9 1.0 1559 3239 4799 DOHH2_400M_050219_2,4800 DOHH2_400M_050219_2,4800,VTEIDQDKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4801 24.703 262.0 270120.0 25 0 52188.0 -1 EATPMLKT 8 103 453.7335644178688 905.4525759025375 2 453.7333862185478 MULTI CID FTMS 0 0 0 4799 172152.296875 0.8356013957851899 5 -0.2136821746826172 2 Oxidation (M) _EATPM(Oxidation (M))LKT_ ENSG00000153310|ENST00000694912|CYRIB;ENSG00000197872|ENST00000381323|CYRIA;ENST00000469507.1_1_2:16742256-16742729:-|nuORF;ENST00000517801.5_1_8:130863079-130874553:-|nuORF;ENST00000523288.5_1_8:130864395-130891707:-|nuORF;nc|ENSG00000153310|Q9NUQ9-2|CYRIB 21.74664581756881 0.5868176546531598 2 {[CP]|[EA]}TP{I|L}T{M(Oxidation (M))|F}K 8 -1 {[CP]|[EA]}T + + 24.014 10.942 3.6337 2.6522 2.6522 48.332 0.0 0.0 0.0 0.0 13.072300657336475 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.1803115997617927 {[CP]|[EA]}TP{I|L}T{M(Oxidation (M))|F}K 2.6522 - 87 + 1 2.001 61171.7 1.0 1560 3239 4799 DOHH2_400M_050219_2,4801 DOHH2_400M_050219_2,4801,EATPMLKT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4802 24.704 15.0 3846700.0 25 0 351260.0 + 7179 EEPTVIKKY 9 80 553.80904394022 1105.60353494724 2 553.8085204958916 MULTI CID FTMS 0 0 0 4799 3991288.0 0.6974616917406818 2 -0.0837898254394531 3 Unmodified _EEPTVIKKY_ ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF 34.40172386719151 0.1061884637610825 2 EEPTV{I|L}KKY 9 0 + 78.421 0.0 0.0 7.0931 7.0931 96.352 0.0 0.0 0.0 29.168657774145657 14.973024840566469 14.973024840566469 66.54342018916313 0 0.3807196863200844 2.0 0.0 0.0 + + EEPTV{I|L}KKY;{[VA]|[{I|L}G]}[{I|L}V][PA]VTP[HC] 7.0931;1.0743 +;- + 86 + 1 2.001 51072.1 1.0 1561 3239 4799 DOHH2_400M_050219_2,4802 DOHH2_400M_050219_2,4802,EEPTVIKKY True True EEPTVIKKY 24.703795 553.808520495892 27046488.0 4799.0 ENST00000490175.5_1_20:17923003-17949420:-|nuORF;;ENST00000547000.1_1_12:101462478-101462640:+|nuORF;;ENSG00000089006|ENST00000377759|SNX5 6.917214870452881 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4803 24.707 174.0 371010.0 25 0 36157.0 + 42387 VTDRSDARLQY 11 77 441.893580775035 1322.658912925305 3 442.2276794314384 MULTI CID FTMS 0 0 0 4799 280869.9375 0.8911432270852934 -2 0.0900459289550781 4 Unmodified _VTDRSDARLQY_ ENSG00000117362|ENST00000369109|APH1A;nc|ENSG00000117362|Q96BI3-2|APH1A 28.23362336080872 0.4292685378469897 2 VTDRCVKP 8 7 55.667 0.0 0.0 4.2087 0.0 0.0 0.0 421.1721107234389 421.1721107234389 36.687522094009 0.0 0.0 0.0 0 0.7429928190999391 1.0 0.0 0.4247425010840047 VTDRCVKP 4.2087 - 105 + 1 2.001 57172.4 1.0 1562 3239 4799 DOHH2_400M_050219_2,4803 DOHH2_400M_050219_2,4803,VTDRSDARLQY False True VTDRSDARLQY 24.707181 441.8937 1967028.125 4799.0 ENSG00000117362|ENST00000369109|APH1A;;nc|ENSG00000117362|Q96BI3-2|APH1A 5.528042316436768 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4804 24.721 800.0 176900.0 25 0 30036.0 + 38469 TSDKPLQGDGY 11 136 590.7774281183492 1179.5403033034984 2 590.7783080935478 MULTI CID FTMS 0 0 0 4799 126833.6328125 0.6974136673396212 -1 0.031585693359375 5 Unmodified _TSDKPLQGDGY_ ENSG00000153201|ENST00000283195|RANBP2 115.8214108901486 0.0276667897965723 2 TSDK[{I|L}P]QGDGY 11 0 + 100.08 0.0 0.0 8.4844 8.4844 97.542 0.0 0.0 0.0 63.77656662473829 16.575773191777927 16.575773191777927 27.391788061410807 0 3.1866654986684733 1.3979400086720375 1.4802046884880935 0.0 + + TSDK[{I|L}P]QGDGY;{[MG]|[TS]}DK[{I|L}P]QGDGY;{[MG]|[TS]}DK[{I|L}P][AG]GDGY;{[MG]|[TS]}DK[HK]GSTGY;AAT{[MG]|[TS]}[{I|L}P]QGDGY;THDGQ[{I|L}P]{[MG]|[TS]}QP;{[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}[{I|L}P]QGDGY;{[MG]|[TS]}DK[HK]GGMGY;{[MG]|[TS]}DK[{I|L}P]{[WN]|[YH]}GY;[PG]A{I|L}[R{M(Oxidation (M))|F}]QGDGY 8.4844;6.1622;5.3883;5.0073;4.7556;4.688;4.629;4.546;4.5444;4.4026 +;+;-;-;-;-;-;-;-;- + 4801 + 1 2.001 107795.5 0.6200000047683716 1563 3239 4799 DOHH2_400M_050219_2,4804 DOHH2_400M_050219_2,4804,TSDKPLQGDGY True True TSDKPLQGDGY 24.721014 590.778308093548 913531.625 4799.0 ENSG00000153201|ENST00000283195|RANBP2 7.817226568857829 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4805 24.728 415.0 247870.0 25 0 53695.0 + 7533 EIDKNDHLY 9 102 573.7753954592769 1145.5362379853536 2 573.7751342654228 MULTI CID FTMS 0 0 0 4799 116992.09375 0.8335979139049364 -1 0.031585693359375 6 Unmodified _EIDKNDHLY_ ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2 56.17704186161178 0.0281986971544335 2 {[QN]|[E{I|L}]|[KN]}D{[QN]|[E{I|L}]|[KN]}DH{I|L}Y 9 0 + 45.058 0.0 0.0 3.9334 3.9334 68.311 0.0 0.0 0.0 29.841824846900806 7.036655871178041 7.036655871178041 0.4524904595219681 0 1.174742501084005 2.0 0.0 0.0 + + {[QN]|[E{I|L}]|[KN]}D{[QN]|[E{I|L}]|[KN]}DH{I|L}Y;{[QN]|[E{I|L}]|[KN]}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DH{I|L}Y;{[QN]|[E{I|L}]|[KN]}D{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}PPQ;{[QN]|[E{I|L}]|[KN]}D{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}Q{[HG]|PP};{[QN]|[E{I|L}]|[KN]}D{[QN]|[E{I|L}]|[KN]}D{[RE]|[WV]}Q;{[QN]|[E{I|L}]|[KN]}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{[RE]|[WV]}Q;{[ET]|[MV]}[YE]S{I|L}E{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}T[C(Carbamidomethyl (C))H]{I|L}Y;{[QN]|[E{I|L}]|[KN]}D{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]{[HG]|PP};{[QN]|[E{I|L}]|[KN]}P[HD][WR]{[HG]|PP} 3.9334;3.8939;2.4351;2.0727;2.0265;1.987;1.826;1.7865;1.4704;1.4309 +;-;-;-;-;-;-;-;-;- + 435 + 1 2.001 84300.8 1.0 1564 3239 4799 DOHH2_400M_050219_2,4805 DOHH2_400M_050219_2,4805,EIDKNDHLY True True EIDKNDHLY 24.728433 573.775134265423 605541.5625 4799.0 ENSG00000102316|ENST00000375068|MAGED2;;nc|ENSG00000102316|Q9UNF1-2|MAGED2 5.007841904958089 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4806 24.731 143.0 430990.0 25 0 49802.0 + 7534 EIDKNDHLY 9 102 382.8523734304721 1145.5352908916163 3 382.8521606326103 MULTI CID FTMS 0 0 0 4799 205214.609375 0.9294856211674488 -1 0.031585693359375 7 Unmodified _EIDKNDHLY_ ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2 8.593279151180031 0.6146971463335029 2 Y 1 8 14.604 0.0 0.0 1.2749 0.0 0.0 964.4610396482556 0.0 964.4610396482556 0.0 3.345033904792878 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2749 + + 76 + 1 2.001 52530.0 1.0 1565 3239 4799 DOHH2_400M_050219_2,4806 DOHH2_400M_050219_2,4806,EIDKNDHLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4808 24.736 89.0 673250.0 25 0 38707.0 + 29998 QTESQQIRY 9 98 576.7863917928847 1151.5582306525694 2 576.7859985232353 MULTI CID FTMS 0 0 0 4807 395410.9375 0.7155088449936576 1 -0.0456695556640625 1 Unmodified _QTESQQIRY_ ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3 63.960520009940105 0.0238892913700936 2 QTESQQ{I|L}RY 9 0 + 93.643 0.0 0.0 8.1318 8.1318 86.505 0.0 0.0 0.0 7.746907182741367 4.247425010840047 4.247425010840047 4.247425010840047 0 0.8539171939081173 1.154901959985743 0.0 1.274227503252014 + + QTESQQ{I|L}RY;QTESQQ{I|L}YR;QTES[AG]Q{I|L}RY;QTESQ[AG]{I|L}RY;QTES[AG]Q{I|L}YR;QTESQ[AG]{I|L}YR;QTES[AG][AG]{I|L}RY;QTES[AG][AG]{I|L}YR;[AG][WM]QQ{I|L}RY;[AG][WM]QQ{I|L}YR 8.1318;7.763;7.3322;7.3322;6.9633;6.9633;6.5364;6.1675;4.5492;4.1803 +;-;-;-;-;-;-;-;-;- + 421 + 1 2.001 46411.7 1.0 1566 3240 4807 DOHH2_400M_050219_2,4808 DOHH2_400M_050219_2,4808,QTESQQIRY True True QTESQQIRY 24.735889 576.785998523235 2783531.25 4807.0 ENSG00000133657|ENST00000645319|ATP13A3;;nc|ENSG00000133657|Q9H7F0|ATP13A3 6.511962254842122 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4809 24.75 800.0 180090.0 25 0 10158.0 + 25196 MTESYEQEKY 10 151 654.2770424850214 1306.5395320368427 2 654.7778198122978 MULTI CID FTMS 0 0 0 4807 150151.171875 0.535640888406901 -1 0.0381202697753906 2 Unmodified _MTESYEQEKY_ ENSG00000040275|ENST00000265295|SPDL1;ENST00000510751.5_1_5:169015420-169022772:+|nuORF;nc|ENSG00000040275|Q96EA4-2|SPDL1;nc|ENSG00000040275|Q96EA4-3|SPDL1 125.0377797344192 0.000220824405701 2 MTESYEQEKY 10 0 + 121.75 0.0 0.0 9.3189 9.3189 89.029 0.0 0.0 0.0 33.52182518111363 5.862657241447309 5.862657241447309 5.862657241447309 0 1.0994850021680094 1.6989700043360187 1.5356668758921828 1.4749073637206092 + + MTESYEQEKY;MTESYEQEYK;MTESYE[AG]EKY;MTESYE[AG]EYK;MTES{[CT]|[{M(Oxidation (M))|F}G]}{[ES]|[DT]|[{I|L}C]}EKY;MTES{[DA]|[EG]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EKY;MTES{[CT]|[{M(Oxidation (M))|F}G]}{[ES]|[DT]|[{I|L}C]}EYK;MTE[YQ]{[ES]|[DT]|[{I|L}C]}EKY;MTEVVEQEMPD;MTES{[DA]|[EG]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EYK 9.3189;8.8702;8.6174;8.1687;6.8636;6.5722;6.4149;6.3418;6.2012;6.1235 +;-;-;-;-;-;-;-;-;- + 6967 + 1 2.001 109879.4 0.5699999928474426 1567 3240 4807 DOHH2_400M_050219_2,4809 DOHH2_400M_050219_2,4809,MTESYEQEKY True True MTESYEQEKY 24.749728 654.777819812298 1612193.0 4807.0 ENSG00000040275|ENST00000265295|SPDL1;;ENST00000510751.5_1_5:169015420-169022772:+|nuORF;;nc|ENSG00000040275|Q96EA4-2|SPDL1;;nc|ENSG00000040275|Q96EA4-3|SPDL1 8.478508472442627 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4810 24.752 107.0 640880.0 25 0 65758.0 + 35480 STMSTNGIPR 10 82 532.2636209634175 1062.5126889936348 2 532.2636596560478 MULTI CID FTMS 0 0 0 4807 395821.25 0.0351998587456948 -4 0.1744060516357422 3 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 55.50274090549119 0.048383292844968 2 {[MG]|[TS]}MSTNG{I|L}RP 10 2 + 68.867 0.0 0.0 6.4815 6.4815 82.718 0.0 0.0 0.0 7.269987279362624 3.979400086720375 3.979400086720375 3.979400086720375 0 0.5 0.0 0.0 1.0501648626366045 {[MG]|[TS]}MSTNG{I|L}RP;{[MG]|[TS]}MSTNG{I|L}PR;{[MG]|[TS]}MSTGGG{I|L}RP;{[MG]|[TS]}MSTGGG{I|L}PR;{[MG]|[TS]}M[{I|L}V][YN][HV] 6.4815;6.107;5.6189;5.2444;1.0757 -;+;-;-;- + 224 + 1 2.001 54146.4 1.0 1568 3240 4807 DOHH2_400M_050219_2,4810 DOHH2_400M_050219_2,4810,STMSTNGIPR True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4811 24.755 159.0 349650.0 25 0 17867.0 + 2704 ATELTHEDY 9 99 539.7385554814812 1077.4625580297622 2 539.7383911013603 MULTI CID FTMS 0 0 0 4807 172053.5625 0.360096889800769 -3 0.1281661987304687 4 Unmodified _ATELTHEDY_ ENSG00000165916|ENST00000298852|PSMC3 48.345845343767074 0.0439967357579942 2 [TA]E{I|L}T{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}ADP 10 4 + 53.108 0.0 0.0 4.929 4.929 73.059 0.0 0.0 0.0 13.449302836445014 0.647124887093824 0.647124887093824 0.9421249706470292 0 0.4247425010840047 2.0 1.174742501084005 0.0 [TA]E{I|L}T{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}ADP;[TA]E{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T{I|L}E[PG];[TA]E{I|L}T{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}EGP;[HT]{I|L}EEDY[TA];[HT]E{I|L}EDY[TA];[TA]E{[QG]|[NA]}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SP;{[ET]|[MV]}H{I|L}EDY[TA];{[ET]|[MV]}A{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T{I|L}E[PG];[HT]{I|L}EDEY[TA];{[YC]|[HE]}T{I|L}EDY[TA] 4.929;4.8415;4.6721;3.358;3.1946;3.1116;3.0573;2.9404;2.8702;2.8252 -;-;-;-;-;-;-;-;-;- 502 + 1 2.001 48503.0 1.0 1569 3240 4807 DOHH2_400M_050219_2,4811 DOHH2_400M_050219_2,4811,ATELTHEDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4812 24.769 800.0 116730.0 25 0 13858.0 + 24687 MMDPNSTQRY 10 108 637.761180983532 1273.507809033864 2 637.7596923708916 MULTI CID FTMS 0 0 0 4807 105738.6484375 1.0 0 0.0 5 2 Oxidation (M) _M(Oxidation (M))M(Oxidation (M))DPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 78.06048673739656 0.0186573233964999 2 {M(Oxidation (M))|F}{M(Oxidation (M))|F}DPNSTQRY 10 0 + 87.319 0.0 0.0 6.8565 6.8565 80.585 0.0 0.0 0.0 73.67397013615849 13.037275116073346 13.037275116073346 1.5186375580366729 0 1.25 0.0 0.805462187404089 1.066901560044258 + + {M(Oxidation (M))|F}{M(Oxidation (M))|F}DPNSTQRY;{M(Oxidation (M))|F}{M(Oxidation (M))|F}DPNSTRQY;{M(Oxidation (M))|F}{M(Oxidation (M))|F}DPGGSTQRY;{M(Oxidation (M))|F}{M(Oxidation (M))|F}DPNST[AG]RY;{M(Oxidation (M))|F}{M(Oxidation (M))|F}DPNSEKQY;{M(Oxidation (M))|F}{M(Oxidation (M))|F}DPGGSTRQY;{M(Oxidation (M))|F}{M(Oxidation (M))|F}DPNSTR[AG]Y;{M(Oxidation (M))|F}{M(Oxidation (M))|F}DPGGST[AG]RY;{M(Oxidation (M))|F}{M(Oxidation (M))|F}DPGGSEKQY;{M(Oxidation (M))|F}{M(Oxidation (M))|F}DPNSEK[AG]Y 6.8565;6.7373;6.1369;6.1369;6.1263;6.0177;5.7623;5.4201;5.4066;5.1512 +;-;-;-;-;-;-;-;-;- + 785 + 1 2.001 72177.3 0.5899999737739563 1570 3240 4807 DOHH2_400M_050219_2,4812 DOHH2_400M_050219_2,4812,MMDPNSTQRY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4813 24.775 336.0 230220.0 25 0 19400.0 + 794 AESLQPKGY 9 100 496.7562145813888 991.4978762295776 2 496.7558776736259 MULTI CID FTMS 0 0 0 4807 97505.28125 0.1748137410052836 -4 0.1744060516357422 6 Unmodified _AESLQPKGY_ ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP 43.85829265575387 0.0542763391141878 2 {[CP]|[EA]}S{I|L}QPKGY 9 0 + 52.543 0.0 0.0 5.2994 5.2994 84.625 0.0 0.0 0.0 35.342008215557264 7.614890119685242 7.614890119685242 9.208187539523747 0 0.9247425010840048 0.7695510786217261 0.0 0.5 + + {[CP]|[EA]}S{I|L}QPKGY;{[CP]|[EA]}S{I|L}[AG]PKGY;{[CP]|[EA]}S{I|L}Q[YK][PG];{[CP]|[EA]}S{I|L}[AG][YK][PG] 5.2994;4.3707;4.2427;3.314 +;-;-;- + 226 + 1 2.001 62333.1 1.0 1571 3240 4807 DOHH2_400M_050219_2,4813 DOHH2_400M_050219_2,4813,AESLQPKGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4814 24.777 80.0 295340.0 25 0 18539.0 + -1 NGLCMMIHY 9 53 557.2303185538341 1112.446084174468 2 557.7308227419853 MULTI CID FTMS 0 0 0 4807 278212.375 0.2717747447066054 4 -0.1755619049072265 7 2 Oxidation (M) _NGLCM(Oxidation (M))M(Oxidation (M))IHY_ REV__ENSG00000138769|ENST00000307465|CDKL2;REV__nc|ENSG00000138769|Q92772|CDKL2 5.230669730166228 0.7320841359114558 2 {I|L}HY 3 -1 23.188 0.0 0.0 2.0844 0.0 0.0 681.2291174770056 0.0 681.2291174770056 0.0 9.208187539523747 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}HY 2.0844 + + 19 + 1 2.001 25927.1 1.0 1572 3240 4807 DOHH2_400M_050219_2,4814 DOHH2_400M_050219_2,4814,NGLCMMIHY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4816 24.782 18.0 2602000.0 25 0 416410.0 + 24685 MMDPNSTQRY 10 55 621.7656473858259 1241.5167418384517 2 621.7659179568291 MULTI CID FTMS 0 0 0 4815 2749912.25 0.6967957458628808 1 -0.0084228515625 1 Unmodified _MMDPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 30.7034409873982 0.2788461460996952 2 MMDPNST 7 3 78.576 0.0 0.0 6.329 0.0 0.0 0.0 462.2103670709594 462.2103670709594 73.09131362978043 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.4247425010840047 + MMDPNST 6.329 + + 53 + 1 2.001 41610.1 1.0 1573 3241 4815 DOHH2_400M_050219_2,4816 DOHH2_400M_050219_2,4816,MMDPNSTQRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4817 24.785 196.0 439490.0 25 0 181940.0 + 20772 LLTSSHKFA 9 70 502.2833165197215 0 502.2834655642509 PEAK CID FTMS 0 0 0 4815 229480.03125 0.8054837551577 -15 0.6790046691894531 2 Unmodified _LLTSSHKFA_ REV__ENSG00000171574|ENST00000306910|ZNF584;REV__ENST00000599145.1_1_19:58928113-58929148:+|nuORF 12.531546534597751 0.2832320739326029 2 D 1 -1 6.9897 0.0 0.0 0.69719 0.0 0.0 263.20382678768675 621.2974947565061 884.5013215441929 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.69719 - 14 + 1 2.001 72403.1 1.0 1574 3241 4815 DOHH2_400M_050219_2,4817 DOHH2_400M_050219_2,4817,LLTSSHKFA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4819 24.79 99.0 601950.0 25 0 67064.0 + 26343 NSELGSETRY 10 89 578.2677558468083 1154.5209587604163 2 578.2674438357353 MULTI CID FTMS 0 0 0 4818 510634.25 0.1307289860241884 -2 0.0540924072265625 1 Unmodified _NSELGSETRY_ ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1 73.1962812333195 0.0188336640735478 2 NSE{I|L}GSETRY 10 0 + 88.586 0.0 0.0 7.673 7.673 85.658 0.0 0.0 0.0 14.393326938302636 4.074853265782679 4.074853265782679 4.074853265782679 0 1.0 1.5228787452803376 0.805462187404089 0.0 + + NSE{I|L}GSETRY;NSE{I|L}GSETYR;NSE{I|L}G[WR]{M(Oxidation (M))|F}{M(Oxidation (M))|F};NSE{I|L}G[WM]RY;NSE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ETRY;NSE{I|L}G[WM]YR;NSE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ETYR;NSE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RV]{M(Oxidation (M))|F}{M(Oxidation (M))|F};NS[W{I|L}]S[RV]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 7.673;7.3201;5.9356;5.6748;5.4141;5.3219;5.0611;4.3115;3.8784 +;-;-;-;-;-;-;-;- + 265 + 1 2.001 48552.0 1.0 1575 3242 4818 DOHH2_400M_050219_2,4819 DOHH2_400M_050219_2,4819,NSELGSETRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4820 24.804 800.0 171550.0 25 0 15017.0 + 6874 SVEGEGEEEGEEY 13 128 721.7764100083895 1441.5382670835788 2 721.7758056521416 MULTI CID FTMS 0 0 0 4818 172983.828125 0.5047656299796808 -2 0.0540924072265625 2 Unmodified _EEEKEQDEDEY_ ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000123416|ENST00000336023|TUBA1B;nc|ENSG00000123416|P68363-2|TUBA1B 17.11289562659939 0.6791789249425932 2 {[DA]|[EG]}EEGEWEW[YE] 11 5 + 85.047 0.0 0.0 5.8997 5.8997 77.133 0.0 0.0 0.0 3.26606256887672 5.862435673934272 3.26606256887672 1.249387366082999 0 0.2742275032520141 1.0969100130080565 3.190614065464281 0.0 {[DA]|[EG]}EEGEWEW[YE];{[DA]|[EG]}EEEGWEW[YE];{[DA]|[EG]}EEGEWWE[YE];EEGEGEWEW[YE];{[DA]|[EG]}EEEGWWE[YE];EEGEEGWEW[YE];{[DA]|[EG]}EGEEWEW[YE];EEGEGEWWE[YE];EEGEEGWWE[YE];{[DA]|[EG]}EEGEEWW[YE] 5.8997;5.813;5.6909;5.6731;5.6042;5.5865;5.5382;5.4643;5.3777;5.3568 -;-;-;-;-;-;-;-;-;- 28030 1 2.001 100679.5 0.7599999904632568 1576 3242 4818 DOHH2_400M_050219_2,4820 DOHH2_400M_050219_2,4820,EEEKEQDEDEY False True SVEGEGEEEGEEY 24.803811 721.775805652142 1712541.125 4818.0 ENSG00000167552|ENST00000301071|TUBA1A;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;ENSG00000123416|ENST00000336023|TUBA1B;;nc|ENSG00000123416|P68363-2|TUBA1B 6.069397608439128 2.0 False 13.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4821 24.806 104.0 578550.0 25 0 63753.0 + 5432 DLNEKARAL 9 78 515.2881900007785 1028.561827068357 2 515.2882568240166 MULTI CID FTMS 0 0 0 4818 355818.75 0.629745476901866 -1 0.0084228515625 3 Unmodified _DLNEKARAL_ ENSG00000114209|ENST00000392750|PDCD10 36.506200033944 0.094635877243972 2 D{I|L}NEKA{I|L}N{I|L} 9 2 + 73.593 0.0 0.0 7.1549 7.1549 83.317 0.0 0.0 0.0 61.78389519906655 3.8508449172253294 3.8508449172253294 3.0102999566398125 0 1.1677353201839438 2.0 0.0 0.4247425010840047 D{I|L}NEKA{I|L}N{I|L};{I|L}DNEKA{I|L}N{I|L};D{I|L}GGEKA{I|L}N{I|L};{I|L}DGGEKA{I|L}N{I|L} 7.1549;6.8623;6.2597;5.967 -;-;-;- 91 + 1 2.001 51676.2 1.0 1577 3242 4818 DOHH2_400M_050219_2,4821 DOHH2_400M_050219_2,4821,DLNEKARAL True True DLNEKARAL 24.806045 515.288256824017 2483432.75 4818.0 ENSG00000114209|ENST00000392750|PDCD10 6.663669904073079 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4822 24.82 800.0 194780.0 25 0 26903.0 + 28275 PRIASNAGSIA 11 148 528.7936581872789 1055.5727634413577 2 528.7936279177666 MULTI CID FTMS 0 0 0 4818 165966.421875 0.987177754712534 -1 0.0084228515625 4 Unmodified _PRIASNAGSIA_ ENSG00000125691|ENST00000479035|RPL23;ENST00000584583.1_1_17:37006387-37006753:-|nuORF 26.020703789607367 0.4812285719068541 2 {[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]KAGS{I|L}A 10 5 + 49.447 0.0 0.0 4.6844 4.6844 83.626 0.0 0.0 0.0 12.759621790487683 28.2319095436452 12.759621790487683 10.339322000954276 0 0.9291746928241126 1.3979400086720375 0.7302046884880938 0.0 {[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]KAGS{I|L}A;{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]KQS{I|L}A;{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]KAGGT{I|L};{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]KANT{I|L};[RP][{I|L}A][NS]AGS{I|L}A;[{I|L}A]YYKAGS{I|L}A;{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]KQGT{I|L};[RP]QQ{[TV]|[{I|L}S]}GS{I|L}A;[{I|L}A][RP][NS]AGS{I|L}A;[RP][{I|L}A][NS]QS{I|L}A 4.6844;3.7049;3.1717;2.5529;2.3921;2.2696;2.1922;1.7692;1.5198;1.4085 -;-;-;-;+;-;-;-;-;- + 561 1 2.001 120900.9 0.6700000166893005 1578 3242 4818 DOHH2_400M_050219_2,4822 DOHH2_400M_050219_2,4822,PRIASNAGSIA False True PRIASNAGSIA 24.819878 528.793627917767 787944.25 4818.0 ENST00000584583.1_1_17:37006387-37006753:-|nuORF;;ENSG00000125691|ENST00000479035|RPL23 4.343695481618245 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4823 24.829 494.0 205770.0 25 0 51173.0 + 25516 NENPSKDQGW 10 119 587.7599720769855 1173.505391220771 2 587.7590820193291 MULTI CID FTMS 0 0 0 4818 123959.640625 0.8574623022295766 1 -0.0571403503417968 5 Unmodified _NENPSKDQGW_ ENSG00000100354|ENST00000454349|TNRC6B;nc|ENSG00000100354|Q9UPQ9-1|TNRC6B 83.42873516780209 0.014257832770272 2 {[QD]|[EN]|[WG]|[KD]|[RS]}N{M(Oxidation (M))|F}NQD 7 6 39.602 0.0 0.0 3.3746 0.0 0.0 0.0 309.15656458072505 309.15656458072505 25.62214796746474 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.8494850021680094 {[QD]|[EN]|[WG]|[KD]|[RS]}N{M(Oxidation (M))|F}NQD 3.3746 - 914 + 1 2.001 81923.3 1.0 1579 3242 4818 DOHH2_400M_050219_2,4823 DOHH2_400M_050219_2,4823,NENPSKDQGW True True NENPSKDQGW 24.828613 587.759082019329 734336.25 4818.0 nc|ENSG00000100354|Q9UPQ9-1|TNRC6B;;ENSG00000100354|ENST00000454349|TNRC6B 8.759317398071289 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4824 24.842 800.0 64610.0 25 0 6354.0 -1 YWVTWCWPHSQ 11 70 775.3378052212269 1548.6610575092536 2 775.3360473513603 MULTI CID FTMS 0 0 0 4818 87925.9453125 1.0 0 0.0 6 Carbamidomethyl (C) _YWVTWC(Carbamidomethyl (C))WPHSQ_ ENST00000596765.5_1_19:50165795-50166512:-|nuORF;nc|ENSG00000126456|Q14653-5|IRF3 1.3295316138638542 0.8688751186870782 2 DEAQQNA{M(Oxidation (M))|F}YQ 10 -1 62.032 0.0 0.0 4.0055 0.0 0.0 336.15339858222814 0.0 336.15339858222814 0.0 38.76078152608656 0.0 0.0 0 0.8935078169319297 0.0 0.0 1.274227503252014 DEAQQNA{M(Oxidation (M))|F}YQ 4.0055 - 401 1 2.001 42353.2 0.5 1580 3242 4818 DOHH2_400M_050219_2,4824 DOHH2_400M_050219_2,4824,YWVTWCWPHSQ False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_2 4826 24.86 800.0 152140.0 25 0 12728.0 + 37444 TLDHRLNDSY 10 125 617.2964059199126 1232.578258906625 2 617.2964965701103 MULTI CID FTMS 0 0 0 4825 61816.4921875 0.1044443066375508 4 -0.1520118713378906 1 Unmodified _TLDHRLNDSY_ ENSG00000081803|ENST00000449022|CADPS2;ENSG00000163618|ENST00000383710|CADPS;ENST00000490424.1_1_3:62521978-62535788:-|nuORF;nc|ENSG00000081803|Q86UW7-2|CADPS2;nc|ENSG00000081803|Q86UW7-3|CADPS2;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS 57.24910588100465 0.0438022649904578 2 [{I|L}T]DH[SG]{I|L}[DV]NY 11 4 + 45.626 0.0 0.0 3.7016 3.7016 77.111 0.0 0.0 0.0 16.41261270118783 7.521608252627828 7.521608252627828 8.947990994253345 0 1.0044321917401078 2.0 0.2887254899964357 0.6109243748081782 [{I|L}T]DH[SG]{I|L}[DV]NY;[{I|L}T]DH[YQ]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[TP];[{I|L}T]DH[SG]{I|L}[HQ][EP];[{I|L}T]D{[WT]|[RM]}WKH{M(Oxidation (M))|F};[{I|L}T]D{[SA]|[TG]}EWKH{M(Oxidation (M))|F};[{I|L}T]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[KT]EP{[{M(Oxidation (M))|F}H]|[RQ]};[{I|L}T]DH[KC][YK][EP];[{I|L}T]D[RN]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[{M(Oxidation (M))|F}H]|[RQ]};[{I|L}T]DH[SG]{I|L}{[WT]|[RM]}G{M(Oxidation (M))|F};{[QS]|[NT]}SPEPRRNY 3.7016;2.9757;2.4594;2.4493;2.2051;2.1811;2.1494;2.1422;2.1116;2.0387 -;-;-;-;-;-;-;-;-;- 907 + 1 2.005 95721.8 0.8299999833106995 1581 3243 4825 DOHH2_400M_050219_2,4826 DOHH2_400M_050219_2,4826,TLDHRLNDSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4827 24.862 63.0 712250.0 25 0 63290.0 -1 STMSTNGIPR 10 87 540.261184100501 1078.507815267802 2 540.2613403201103 MULTI CID FTMS 0 0 0 4825 692396.75 0.4877043634125977 -1 0.0571403503417968 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 22.65808497894818 0.4596126414678359 2 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 10 -1 + 46.688 0.0 0.0 4.3289 4.3289 72.429 0.0 0.0 0.0 7.269987279362624 2.430380486862944 2.430380486862944 2.430380486862944 0 0.3494850021680094 0.0 0.0 0.3807196863200844 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STN[R{I|L}]GP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG[R{I|L}]GP;[TA][R{I|L}]N[RD]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 4.3289;4.1036;3.4792;3.2538;3.1923;2.3426;1.7196 -;+;-;-;-;-;- + 172 + 1 2.005 42221.0 1.0 1582 3243 4825 DOHH2_400M_050219_2,4827 DOHH2_400M_050219_2,4827,STMSTNGIPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4828 24.865 170.0 383610.0 25 0 38257.0 + 43299 WKRFIFSL 8 92 366.2134072954191 1095.6183924864572 3 366.2138244509697 MULTI CID FTMS 0 0 0 4825 242802.4375 1.0 0 0.0 3 Unmodified _WKRFIFSL_ REV__ENSG00000154263|ENST00000690296|ABCA10;REV__ENST00000519732.5_1_17:67144970-67171813:-|nuORF;REV__ENST00000522406.5_1_17:67144970-67178294:-|nuORF;REV__nc|ENSG00000154263|Q8WWZ4-2|ABCA10 10.823927491677226 0.7510103885582552 2 S{I|L} 2 -1 15.758 0.0 0.0 1.4382 0.0 0.0 877.49085755169 0.0 877.49085755169 0.0 5.273109370204452 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 S{I|L} 1.4382 + + 60 + 1 2.005 56951.6 1.0 1583 3243 4825 DOHH2_400M_050219_2,4828 DOHH2_400M_050219_2,4828,WKRFIFSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4829 24.872 367.0 288820.0 25 0 21921.0 + 33099 SESKTVVTY 9 114 507.2608497423031 1012.5071465514062 2 507.2614623904228 MULTI CID FTMS 0 0 0 4825 183269.0625 0.7144125785906096 -1 0.0571403503417968 4 Unmodified _SESKTVVTY_ ENSG00000160223|ENST00000407780|ICOSLG;nc|ENSG00000160223|O75144-2|ICOSLG 63.960520009940105 0.0238892913700936 2 {[ES]|[DT]|[{I|L}C]}SKTVVTY 9 0 + 45.956 0.0 0.0 4.5388 4.5388 71.378 0.0 0.0 0.0 0.9370405245622564 9.758265458183438 0.9370405245622564 0.9370405245622564 0 1.718765315847925 0.0 1.1989700043360187 0.0 + + {[ES]|[DT]|[{I|L}C]}SKTVVTY;{[MG]|[TS]}DKTVVTY;{[ES]|[DT]|[{I|L}C]}SKTVTVY;{[MG]|[TS]}DKTVTVY;[KS]{[ES]|[DT]|[{I|L}C]}TVVTY;{[TV]|[{I|L}S]}[KS]{[ES]|[DT]|[{I|L}C]}VTY;[KS][WM]VVTY;[KS]{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}VTY;{[DS]|[MA]|[CV]|TT}[QT]TVVTY;{[TV]|[{I|L}S]}VKS{[ES]|[DT]|[{I|L}C]}TY 4.5388;4.4463;3.4069;3.3144;2.887;2.786;2.4966;2.227;2.127;2.0175 +;-;-;-;-;-;-;-;-;- + 362 1 2.005 88558.1 1.0 1584 3243 4825 DOHH2_400M_050219_2,4829 DOHH2_400M_050219_2,4829,SESKTVVTY True True SESKTVVTY 24.871505 507.261462390423 1038999.9375 4825.0 nc|ENSG00000160223|O75144-2|ICOSLG;;ENSG00000160223|ENST00000407780|ICOSLG 5.916428407033284 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4830 24.883 638.0 326250.0 25 0 16885.0 + 7440 EGNPDTHSW 9 189 521.7143921031505 1041.414231273101 2 521.7150146365166 MULTI CID FTMS 0 0 0 4825 146537.0 0.1937157907164989 -5 0.180938720703125 5 Unmodified _EGNPDTHSW_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 71.13359017698441 0.0206607516130725 2 {[DA]|[EG]}NPDTHSW 9 0 {[DA]|[EG]}N + + 40.505 20.29 6.7611 3.8894 3.8894 51.303 0.0 0.0 0.0 0.0 9.835331758233256 0.0 0.0 0 0.3494850021680094 0.0 1.4436726795685342 0.0 + + {[DA]|[EG]}NPDTHSW 3.8894 + + 1703 + 1 2.005 162860.2 1.0 1585 3243 4825 DOHH2_400M_050219_2,4830 DOHH2_400M_050219_2,4830,EGNPDTHSW True True EGNPDTHSW 24.882638 521.715014636517 4433842.0 4825.0 nc|ENSG00000143569|Q14157-1|UBAP2L;;nc|ENSG00000143569|Q14157-4|UBAP2L;;nc|ENSG00000143569|Q14157-5|UBAP2L;;nc|ENSG00000143569|Q14157-3|UBAP2L;;ENSG00000143569|ENST00000428931|UBAP2L 8.494508743286133 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4831 24.893 594.0 249190.0 25 0 25713.0 + 16111 ITSSAVTTALK 11 134 546.3175488634707 1090.6205447937414 2 546.3181030154228 MULTI CID FTMS 0 0 0 4825 108335.5546875 0.6592231911231079 -1 0.0571403503417968 6 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 49.52724829834842 0.1202481389936634 2 {I|L}TS[YR]G[PG]{I|L}K 10 6 + 56.093 0.0 0.0 5.1432 5.1432 80.703 0.0 0.0 0.0 30.563190503626963 0.6987901662469795 0.6987901662469795 6.53212513775344 0 0.4247425010840047 2.0 0.6989700043360187 0.4220615347360614 {I|L}TS[YR]G[PG]{I|L}K;{I|L}TS[YR][NP]{I|L}K;[{I|L}T][KA]TVA{[CA]|SS}T{I|L};{I|L}TS[YR]G[KA][VP];[{I|L}T][KA]GG{I|L}S[MT]{I|L};[{I|L}T][KA]TVN[MT]{I|L};{I|L}TS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T[PG]{I|L}K;[{I|L}T][KA]TVA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};{I|L}TS[YR][KQ][VP];{I|L}TS{[HG]|PP}R[RH]K 5.1432;4.5442;4.5439;4.5035;4.4474;4.3264;4.2263;4.0346;3.9046;3.8582 -;-;-;-;-;-;-;-;-;- 1370 + 1 2.005 117269.9 1.0 1586 3243 4825 DOHH2_400M_050219_2,4831 DOHH2_400M_050219_2,4831,ITSSAVTTALK True True False False splicing PXD020620_cell_line DOHH2_400M_050219_2 4832 24.907 800.0 65135.0 25 0 3712.7 + + -1 VSDPSPNTDPAKY 13 94 695.8282438288776 1389.641934724555 2 695.8301879763603 MULTI CID FTMS 0 0 0 4825 80834.609375 0.7408821203310574 1 -0.0643291473388671 7 Carbamidomethyl (C) _DVSFSC(Carbamidomethyl (C))FPRLY_ ENSG00000063587|ENST00000650114|ZNF275 8.745405648335112 0.8338865417133445 2 [DP]SQ[PS][RH]SPD[PA] 13 -1 + 47.849 0.0 0.0 3.4433 3.4433 68.672 0.0 0.0 0.0 1.7609125905568137 5.5508558540304165 1.7609125905568137 1.7609125905568137 0 0.7614393726401688 1.6989700043360187 0.25 0.0 [DP]SQ[PS][RH]SPD[PA];[PS]DQ[PS][RH]SPD[PA];[VS]DPS[RH][Y{M(Oxidation (M))|F}]DAP;[VS]D[Y{M(Oxidation (M))|F}][RH]SPD[PA];[VS]DPS[RH][Y{M(Oxidation (M))|F}]EGP;[TA]E[Y{M(Oxidation (M))|F}][RH]SPD[PA] 3.4433;3.3165;2.8054;2.5392;2.5373;1.5185 -;-;-;-;-;- 217 1 2.005 44653.1 0.5199999809265137 1587 3243 4825 DOHH2_400M_050219_2,4832 DOHH2_400M_050219_2,4832,DVSFSCFPRLY False False VSDPSPNTDPAKY 24.906863 695.83018797636 902046.3125 4825.0 ENSG00000063587|ENST00000650114|ZNF275 7.377948602040608 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4834 24.923 800.0 99096.0 25 0 13225.0 + -1 CLCFAPCIAF 10 115 629.775709511131 1257.536866089062 2 629.7623779177666 MULTI CID FTMS 0 0 0 -1 0 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 7.910154910731844 0.6900473968920092 2 NPD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 5 -1 18.684 0.0 0.0 1.4858 0.0 0.0 653.3146839826187 0.0 653.3146839826187 0.0 5.920190159878267 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 NPD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 1.4858 - 485 1 2.005 66946.3 0.699999988079071 1588 3244 4833 DOHH2_400M_050219_2,4834 DOHH2_400M_050219_2,4834,CLCFAPCIAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4835 24.933 570.0 193690.0 25 0 14083.0 + 2773 ATQERTDLY 9 160 548.7676402793826 1095.520727625565 2 548.7662841677666 MULTI CID FTMS 0 0 0 4833 132746.40625 0.6918962068955969 -4 0.1755619049072265 2 Unmodified _ATQERTDLY_ ENSG00000108055|ENST00000361804|SMC3 38.17557092003332 0.0854718145212029 2 [TA]QEWW{I|L}Y 8 3 + 61.094 0.0 0.0 5.5767 5.5767 87.847 0.0 0.0 0.0 29.77268601167241 16.152244606891372 16.152244606891372 12.75698788007091 0 1.25 1.2218487496163564 0.3494850021680094 0.3494850021680094 [TA]QEWW{I|L}Y;[TA][AG]EWW{I|L}Y;[TA]Q[{M(Oxidation (M))|F}T][KT]HY;{NN|[MP]|[D{I|L}]|[EV]}H[YT][TA]{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}H[YT]{I|L}[TA]Y;[TA]QEWWY{I|L};[TA]QEH{[{M(Oxidation (M))|F}H]|[RQ]}N{I|L};[TA]QEH{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}N;[TA]Q[{M(Oxidation (M))|F}T]A[{M(Oxidation (M))|F}T]P{I|L};[TA][AG]EWWY{I|L} 5.5767;4.4122;4.1583;4.0571;3.9884;3.8541;2.9626;2.7974;2.7572;2.6896 -;-;-;-;-;-;-;-;-;- 885 + 1 2.005 90519.7 1.0 1589 3244 4833 DOHH2_400M_050219_2,4835 DOHH2_400M_050219_2,4835,ATQERTDLY True True ATQERTDLY 24.933048 548.766284167767 926724.75 4833.0 ENSG00000108055|ENST00000361804|SMC3 5.933049996693929 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4837 24.941 285.0 303400.0 25 0 26775.0 + -1 VEMLGAIA 8 127 410.21704942857633 818.4195459239527 2 410.2160827517509 MULTI CID FTMS 0 0 0 4836 60859.5546875 0.5692589943203612 2 -0.0614204406738281 1 Oxidation (M) _VEM(Oxidation (M))LGAIA_ REV__ENSG00000155363|ENST00000369645|MOV10;REV__ENST00000468624.5_1_1:113217534-113241292:+|nuORF;REV__ENST00000496577.5_1_1:113231344-113241292:+|nuORF;REV__nc|ENSG00000155363|Q9HCE1-2|MOV10 10.183394434864962 0.7604730176254005 2 [DV]PP[KT]Y 7 -1 + 16.788 0.0 0.0 2.0513 2.0513 65.931 0.0 0.0 0.0 4.313725836429896 1.492887666437138 1.492887666437138 1.492887666437138 0 0.1861818737241735 0.0 0.2742275032520141 0.0 [DV]PP[KT]Y;[DV]P{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[DV]P{I|L}{[NV]|[RG]}Y;[DV]PP{[HG]|PP}[TP];[DV]P[YK][TP] 2.0513;1.8689;1.1332;0.62607;0.09079 -;-;-;-;- 69 + 1 2.005 72747.2 1.0 1590 3245 4836 DOHH2_400M_050219_2,4837 DOHH2_400M_050219_2,4837,VEMLGAIA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4838 24.943 113.0 589470.0 25 0 82678.0 + 45450 YTDVSTRY 8 85 502.7374431255373 1003.4603333178746 2 502.7371093630791 MULTI CID FTMS 0 0 0 4836 340414.9375 1.0 0 0.0 2 Unmodified _YTDVSTRY_ ENSG00000213593|ENST00000278422|TMX2;ENST00000436507.2_1_9:37885847-37886384:+|nuORF;nc|ENSG00000213593|Q9Y320-2|TMX2 29.081581746732265 0.4323690340403521 2 YTDV 4 4 57.607 0.0 0.0 5.7409 0.0 0.0 0.0 522.2320852174313 522.2320852174313 47.6072158606037 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + YTDV 5.7409 + + 58 + 1 2.005 52526.9 1.0 1591 3245 4836 DOHH2_400M_050219_2,4838 DOHH2_400M_050219_2,4838,YTDVSTRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4839 24.947 232.0 603160.0 25 0 63519.0 + 35672 SVDPTQTEY 9 146 520.2326512471852 1038.4507495611704 2 520.2331420779228 MULTI CID FTMS 0 0 0 4836 299456.46875 0.1214895767988117 -5 0.2018241882324218 3 Unmodified _SVDPTQTEY_ ENSG00000009307|ENST00000358528|CSDE1;ENST00000483030.1_1_1:115263111-115268953:-|nuORF;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 30.63653989081413 0.1413794767160703 2 [TP]QTEAT[YE] 9 6 + 25.352 0.0 0.0 2.4413 2.4413 70.657 0.0 0.0 0.0 4.805950160551738 1.3613136487801256 1.3613136487801256 4.938331324631378 0 0.0 1.0457574905606752 1.3076556684809653 0.4247425010840047 [TP]QTEAT[YE];[TP]QDT[VS][YE];[TP]QTD[VS][YE];[QT]PTEAT[YE];[TP]QD[VS]T[YE];[VS]D[TP]QT[YE];[TP]DQT[VS][YE];[VS][SG]PEAT[YE];[TP]QT[WP][Y{M(Oxidation (M))|F}];[QT]TPEAT[YE] 2.4413;1.9658;1.867;1.7488;1.6975;1.6421;1.5734;1.5539;1.363;1.3263 -;-;-;-;-;+;-;-;-;- + 1505 1 2.005 111519.2 1.0 1592 3245 4836 DOHH2_400M_050219_2,4839 DOHH2_400M_050219_2,4839,SVDPTQTEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4841 24.953 135.0 581310.0 25 0 82529.0 + 5233 DIYSKKTL 8 87 484.27636533175365 966.5381777303072 2 484.2761413455009 MULTI CID FTMS 0 0 0 4840 446570.46875 0.223566201198356 4 -0.1715850830078125 1 Unmodified _DIYSKKTL_ ENSG00000173473|ENST00000254480|SMARCC1;ENST00000483847.1_1_3:47712102-47719818:-|nuORF 41.8396318013385 0.2035142800366642 2 {NN|[MP]|[D{I|L}]|[EV]}YSKKT{I|L} 8 0 + 62.9 0.0 0.0 6.5078 6.5078 91.713 0.0 0.0 0.0 37.450238785955065 14.743386143920452 14.743386143920452 14.745462655597096 0 0.75 2.0 0.9517188504113846 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}YSKKT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[HQ]KT{I|L};[KS]KYT{I|L}D{I|L};KKSYT{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[WP]K[VP];[KS]YKT{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}TKR{[CT]|[{M(Oxidation (M))|F}G]} 6.5078;4.9822;2.1443;1.7858;1.7807;1.7576;0.66273 +;-;-;-;-;-;- + 250 + 1 2.005 66008.9 1.0 1593 3246 4840 DOHH2_400M_050219_2,4841 DOHH2_400M_050219_2,4841,DIYSKKTL False True DIYSKKTL 24.952552 484.276141345501 17688062.0 4840.0 ENST00000483847.1_1_3:47712102-47719818:-|nuORF;;ENSG00000173473|ENST00000254480|SMARCC1 5.145242849985759 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4842 24.966 800.0 112330.0 25 0 24116.0 + 42355 VTDDSPKYNY 10 116 601.2730221179071 1200.531491302614 2 601.2722656130791 MULTI CID FTMS 0 0 0 4840 35423.3203125 0.3682858099678896 1 -0.0470638275146484 2 Unmodified _VTDDSPKYNY_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 29.84058131909904 0.2982332456971691 2 VTDDS[HA]YSP 10 4 50.01 0.0 0.0 4.1657 0.0 0.0 0.0 125.0723818414672 125.0723818414672 31.030768805449185 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 VTDDS[HA]YSP 4.1657 - 472 + 1 2.005 67365.2 0.5899999737739563 1594 3246 4840 DOHH2_400M_050219_2,4842 DOHH2_400M_050219_2,4842,VTDDSPKYNY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4843 24.973 372.0 184540.0 25 0 19274.0 + 19086 LDRRATGL 8 112 451.2647905513406 900.5150281694812 2 451.2640869021416 MULTI CID FTMS 0 0 0 4840 103122.0234375 0.1574709300272518 7 -0.334970474243164 3 Unmodified _LDRRATGL_ REV__ENSG00000143847|ENST00000295706|PPFIA4;REV__ENST00000601609.1_1_1:203014552-203015555:+|nuORF;REV__nc|ENSG00000143847|O75335|PPFIA4 14.838274106304384 0.6917062315640577 2 D{I|L}R 3 -1 44.297 0.0 0.0 4.9191 0.0 0.0 0.0 513.2796724908811 513.2796724908811 31.82258126592544 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.0 0.0 D{I|L}R 4.9191 - 57 + 1 2.005 59547.7 1.0 1595 3246 4840 DOHH2_400M_050219_2,4843 DOHH2_400M_050219_2,4843,LDRRATGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4844 24.987 800.0 169300.0 25 0 76792.0 + 5174 DILRERLTQ 9 95 572.3253288665255 0 572.3249389529228 PEAK CID FTMS 0 0 0 4840 130348.1171875 0.8458654514678396 10 -0.4156665802001953 4 Unmodified _DILRERLTQ_ REV__ENSG00000116260|ENST00000367602|QSOX1;REV__nc|ENSG00000116260|O00391-2|QSOX1 3.944395688203298 0.3444685223463734 2 D 1 -1 5.4846 0.0 0.0 0.47999 0.0 0.0 797.5179235027791 227.0674837701781 1024.5854072729574 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.47999 + + 11 + 1 2.005 106419.7 0.6499999761581421 1596 3246 4840 DOHH2_400M_050219_2,4844 DOHH2_400M_050219_2,4844,DILRERLTQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4845 24.994 426.0 128860.0 25 0 13450.0 + -1 CLCFAPCIAF 10 97 629.775709511131 1257.536866089062 2 629.7776367068291 MULTI CID FTMS 0 0 0 4840 133323.5 1.0 0 0.0 5 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 7.910154910731844 0.6900473968920092 2 [QA]HDEAQQ 8 -1 15.839 0.0 0.0 1.2595 0.0 0.0 0.0 347.136694540487 347.136694540487 1.8597253175285309 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [QA]HDEAQQ 1.2595 - 536 1 2.005 46338.0 1.0 1597 3246 4840 DOHH2_400M_050219_2,4845 DOHH2_400M_050219_2,4845,CLCFAPCIAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4847 25.0 182.0 320280.0 25 0 28391.0 + 42416 VTEIDQDKY 9 92 555.7697469783673 1109.5249410235344 2 555.7692748904228 MULTI CID FTMS 0 0 0 4846 334945.59375 0.0309447377409369 12 -0.4955768585205078 1 Unmodified _VTEIDQDKY_ ENSG00000196924|ENST00000369850|FLNA;nc|ENSG00000196924|P21333-2|FLNA 70.33199760932243 0.0209706178985989 2 VTE{I|L}DQDKY 9 0 + 93.919 0.0 0.0 8.4648 8.4648 88.877 0.0 0.0 0.0 82.42219892074398 12.98332479720628 12.98332479720628 6.034087492996392 0 0.805462187404089 2.0 0.6747425010840047 0.2742275032520141 + + VTE{I|L}DQDKY;VTE{I|L}ENDKY;VTE{I|L}D[AG]DKY;VTE{I|L}EGGDKY;VTE{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DKY;VTE[QP][EP]V[DP];VT[Y{M(Oxidation (M))|F}][RN]V[DP];VTE[QP][EP]D[VP];VT[Y{M(Oxidation (M))|F}][RN]D[VP];VTE{[QD]|[EN]|[WG]|[KD]|[RS]}[WH][VP] 8.4648;7.921;7.6349;7.0911;6.3436;4.7536;4.4568;3.9583;3.6615;3.3746 +;-;-;-;-;-;-;-;-;- + 572 + 1 2.005 56512.0 1.0 1598 3247 4846 DOHH2_400M_050219_2,4847 DOHH2_400M_050219_2,4847,VTEIDQDKY True True VTEIDQDKY 25.000418 555.769274890423 145422528.0 4846.0 ENSG00000196924|ENST00000369850|FLNA;;nc|ENSG00000196924|P21333-2|FLNA 9.55593172709147 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4848 25.006 298.0 357340.0 25 0 92652.0 + 8338 ERQSLTREM 9 108 383.86060950052 1148.55999910176 3 383.8604919314384 MULTI CID FTMS 0 0 0 4846 120372.4921875 0.5890773200736178 1 -0.0408668518066406 2 Unmodified _ERQSLTREM_ REV__ENSG00000145982|ENST00000274680|FARS2 10.823927491677226 0.5436922275383211 2 EM 2 -1 20.445 0.0 0.0 1.7801 0.0 0.0 870.4641991423725 0.0 870.4641991423725 0.0 5.203037561203843 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 EM 1.7801 + + 35 1 2.005 91360.7 1.0 1599 3247 4846 DOHH2_400M_050219_2,4848 DOHH2_400M_050219_2,4848,ERQSLTREM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4849 25.009 150.0 495990.0 25 0 38403.0 + 25834 NLDKNTVGY 9 116 512.2589734856608 1022.5033940381217 2 512.2595092654228 MULTI CID FTMS 0 0 0 4846 260999.03125 0.0999259860596989 -3 0.0876827239990234 3 Unmodified _NLDKNTVGY_ ENSG00000007923|ENST00000377577|DNAJC11;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;nc|ENSG00000007923|Q9NVH1-3|DNAJC11 45.69961567697781 0.0497987121815769 2 {[QV]|[N{I|L}]|[RA]|[KV]}SKDGAVGY 10 4 + 65.854 0.0 0.0 6.4405 6.4405 77.858 0.0 0.0 0.0 16.926161054293374 8.066884185923648 8.066884185923648 0.5115252244738144 0 1.242992819099939 2.0 1.6549471895720984 0.1803115997617927 {[QV]|[N{I|L}]|[RA]|[KV]}SKDGAVGY;{[QV]|[N{I|L}]|[RA]|[KV]}SKDQVGY;{[QV]|[N{I|L}]|[RA]|[KV]}S[SG]VGAVGY;{[QV]|[N{I|L}]|[RA]|[KV]}S[SG]VQVGY;{[QV]|[N{I|L}]|[RA]|[KV]}SKD{I|L}NGY;[KA]DKDGAVGY;[KA]DKDQVGY;{[QV]|[N{I|L}]|[RA]|[KV]}AANTTVGY;{[QV]|[N{I|L}]|[RA]|[KV]}AA{[MG]|[TS]}GAVGY;{[QV]|[N{I|L}]|[RA]|[KV]}AA{[MG]|[TS]}QVGY 6.4405;6.3905;5.5442;5.4899;5.2915;4.7851;4.7351;4.4852;4.4714;4.4172 -;-;-;-;-;-;-;-;-;- 1047 1 2.005 60268.1 1.0 1600 3247 4846 DOHH2_400M_050219_2,4849 DOHH2_400M_050219_2,4849,NLDKNTVGY True True NLDKNTVGY 25.008879 512.259509265423 22901702.0 4846.0 nc|ENSG00000007923|Q9NVH1-3|DNAJC11;;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;;ENSG00000007923|ENST00000377577|DNAJC11 6.166000048319499 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4850 25.012 179.0 587000.0 25 0 119930.0 + 12898 GWGPPPSL 8 106 405.7101583143503 809.4057636955006 2 405.7107726931572 MULTI CID FTMS 0 0 0 4846 188306.640625 0.5440577224742558 -1 0.0470638275146484 4 Unmodified _GWGPPPSL_ REV__nc|ENSG00000180068|P47883|OR3A4P 14.581692164780916 0.6954967302934248 2 YHKYS{I|L} 6 -1 + 48.74 0.0 0.0 6.0217 6.0217 89.55 0.0 0.0 0.0 34.74932183384787 9.73840982034175 9.73840982034175 12.726885749969313 0 0.6677353201839438 1.3010299956639813 0.2396518287104437 0.0 YHKYS{I|L};YHV[KT]Y 6.0217;4.4493 -;- 88 + 1 2.005 84136.8 1.0 1601 3247 4846 DOHH2_400M_050219_2,4850 DOHH2_400M_050219_2,4850,GWGPPPSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4851 25.019 390.0 293920.0 25 0 24348.0 + 8846 EYVSSQLGRP 10 121 568.2924378179605 1134.570322702721 2 568.2922241091728 MULTI CID FTMS 0 0 0 4846 165607.9375 0.1424301386133164 -4 0.1520118713378906 5 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 22.736283301280096 0.4578556481593033 2 {M(Oxidation (M))|F}STNG{I|L}RP 8 -1 60.941 0.0 0.0 5.3713 0.0 0.0 244.1421505491234 0.0 244.1421505491234 0.0 41.95677228596267 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.5994850021680094 {M(Oxidation (M))|F}STNG{I|L}RP 5.3713 - 515 + 1 2.005 87467.8 1.0 1602 3247 4846 DOHH2_400M_050219_2,4851 DOHH2_400M_050219_2,4851,EYVSSQLGRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4852 25.027 449.0 181550.0 25 0 15246.0 + 19362 LEQEHTQGF 9 124 544.7557502238138 1087.4969475144276 2 544.7536498904228 MULTI CID FTMS 0 0 0 4846 97602.171875 1.0 0 0.0 6 Unmodified _LEQEHTQGF_ ENSG00000108384|ENST00000337432|RAD51C;ENST00000475762.5_1_17:56772326-56801433:+|nuORF;ENST00000487921.5_1_17:56769962-56783250:+|nuORF;nc|ENSG00000108384|O43502-2|RAD51C 61.60191391372663 0.0251951588191061 2 {I|L}EQEHTQG{M(Oxidation (M))|F} 9 0 + 69.58 0.0 0.0 6.3982 6.3982 88.621 0.0 0.0 0.0 33.72363747448347 9.660677999045715 9.660677999045715 9.208187539523747 0 1.0044321917401078 2.0 0.5 0.8494850021680094 + + {I|L}EQEHTQG{M(Oxidation (M))|F};{I|L}E[AG]EHTQG{M(Oxidation (M))|F};{I|L}EQEH[RN]Y;{I|L}EQEQQ[WQ];{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}GQC(Carbamidomethyl (C)){I|L}G{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}G[DG]TQG{M(Oxidation (M))|F};{I|L}EQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[NS]G{M(Oxidation (M))|F};{I|L}E[AG]EH[RN]Y;{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}G{[CP]|[EA]}[NS]G{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[DN]TQG{M(Oxidation (M))|F} 6.3982;5.5515;5.5098;4.8929;4.8124;4.8108;4.8094;4.6582;4.3562;4.2583 +;-;-;-;-;-;-;-;-;- + 1065 + 1 2.005 68791.8 1.0 1603 3247 4846 DOHH2_400M_050219_2,4852 DOHH2_400M_050219_2,4852,LEQEHTQGF True True LEQEHTQGF 25.027316 544.753649890423 560290.0625 4846.0 ENST00000487921.5_1_17:56769962-56783250:+|nuORF;;nc|ENSG00000108384|O43502-2|RAD51C;;ENSG00000108384|ENST00000337432|RAD51C;;ENST00000475762.5_1_17:56772326-56801433:+|nuORF 6.711410681406657 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4853 25.035 455.0 354070.0 25 0 22784.0 + 35232 SSDRTITEY 9 157 536.2513369988188 1070.4881210644376 2 536.2502319216728 MULTI CID FTMS 0 0 0 4846 91612.421875 0.1238216218686504 -3 0.0876827239990234 7 Unmodified _SSDRTITEY_ ENSG00000100994|ENST00000216962|PYGB;ENST00000471359.1_1_20:25274602-25277155:+|nuORF 70.33199760932243 0.0209706178985989 2 [{M(Oxidation (M))|F}V][QA]T{I|L}TEY 9 4 + 58.329 0.0 0.0 5.4489 5.4489 78.97 0.0 0.0 0.0 2.597587459137713 41.61622501717439 2.597587459137713 4.058575521858302 0 1.0994850021680094 0.494850021680094 1.305462187404089 0.0 [{M(Oxidation (M))|F}V][QA]T{I|L}TEY;[{I|L}T]{[QC]|[C(Carbamidomethyl (C))A]}T{I|L}TEY;{[DS]|[MA]|[CV]|TT}{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}TEY;{[CA]|SS}[RD]T{I|L}TEY;[TA]{[WS]|[C(Carbamidomethyl (C)){I|L}]}T{I|L}TEY;{[VA]|[{I|L}G]}N{[{M(Oxidation (M))|F}D]|MM}{I|L}TEY;{[ET]|[MV]}{[WT]|[RM]}AATEY;[QP]EG{I|L}T[YT]Y;[AG][VG]{[{M(Oxidation (M))|F}D]|MM}{I|L}TEY;{[VA]|[{I|L}G]}GG{[{M(Oxidation (M))|F}D]|MM}{I|L}TEY 5.4489;5.0697;5.0032;4.8965;4.2378;3.8352;3.6085;3.5364;3.5223;2.975 -;-;-;+;-;-;-;-;-;- + 1452 1 2.005 124049.7 1.0 1604 3247 4846 DOHH2_400M_050219_2,4853 DOHH2_400M_050219_2,4853,SSDRTITEY True True SSDRTITEY 25.035395 536.250231921673 2875576.5 4846.0 ENSG00000100994|ENST00000216962|PYGB;;ENST00000471359.1_1_20:25274602-25277155:+|nuORF 5.30875285466512 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4855 25.04 11.0 4557100.0 25 0 460900.0 + 35481 STMSTNGIPR 10 68 532.2636209634175 1062.5126889936348 2 532.2637206912041 MULTI CID FTMS 0 0 0 4854 4557989.5 0.4053359605234946 4 -0.2203083038330078 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 41.95555342248728 0.1369168616057562 2 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 10 2 + 57.95 0.0 0.0 5.4541 5.4541 80.616 0.0 0.0 0.0 7.269987279362624 5.740312677277188 5.740312677277188 5.740312677277188 0 0.5 0.0 0.0 1.055462187404089 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MSTN[R{I|L}]GP;{[MG]|[TS]}MSTGG[R{I|L}]GP;[TA][R{I|L}]NTSDW;[TA][R{I|L}]GGTSDW;{[MG]|[TS]}M[{I|L}V][YN][HV] 5.4541;4.9138;4.5916;4.0513;3.9919;3.1294;2.1633;1.2966;0.79237 -;+;-;-;-;-;-;-;- + 109 + 1 2.005 40625.1 1.0 1605 3248 4854 DOHH2_400M_050219_2,4855 DOHH2_400M_050219_2,4855,STMSTNGIPR False True STMSTNGIPR 25.039997 532.263720691204 5977530.0 4854.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 8.783782958984375 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4856 25.044 185.0 365710.0 25 0 36485.0 + 795 AESLQPKGY 9 91 496.7562145813888 991.4978762295776 2 496.7559081912041 MULTI CID FTMS 0 0 0 4854 303593.84375 0.5443025740937603 4 -0.2203083038330078 2 Unmodified _AESLQPKGY_ ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP 61.357469665136826 0.0253304979873734 2 {[CP]|[EA]}S{I|L}QPKGY 9 0 + 35.128 0.0 0.0 3.543 3.543 78.913 0.0 0.0 0.0 10.57582781025922 8.300756084811816 8.300756084811816 9.208187539523756 0 1.079689690656103 0.0 0.0 0.5 + + {[CP]|[EA]}S{I|L}QPKGY;{[CP]|[EA]}S{I|L}[AG]PKGY;{[CP]|[EA]}S{I|L}Q[YK][PG] 3.543;2.6143;2.1613 +;-;- + 181 + 1 2.005 55251.8 1.0 1606 3248 4854 DOHH2_400M_050219_2,4856 DOHH2_400M_050219_2,4856,AESLQPKGY True True AESLQPKGY 25.043558 496.755908191204 5870030.5 4854.0 nc|ENSG00000080603|Q6ZRS2-3|SRCAP;;ENSG00000080603|ENST00000262518|SRCAP;;nc|ENSG00000080603|Q6ZRS2-2|SRCAP 7.659762859344482 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4857 25.047 154.0 452520.0 25 0 48069.0 + 38478 TSDNGKDGLAY 11 100 570.7619070901858 1139.5092612471717 2 570.7615844607353 MULTI CID FTMS 0 0 0 4854 347052.625 0.0809358555838205 -3 0.1022872924804687 3 Unmodified _TSDNGKDGLAY_ ENSG00000105325|ENST00000441788|FZR1;nc|ENSG00000105325|Q9UM11-3|FZR1;nc|ENSG00000105325|Q9UM11|FZR1 51.487983226225225 0.1093896055713593 2 {[MG]|[TS]}PKGNSDTAY 11 6 + 65.729 0.0 0.0 5.7682 5.7682 58.617 0.0 0.0 0.0 7.041751231016676 37.5807921056276 7.041751231016676 0.0 0 1.5 0.0 0.555462187404089 0.3807196863200844 {[MG]|[TS]}PKGNSDTAY;{[MG]|[TS]}PKGNDSTAY;{[MG]|[TS]}PKGNAMTAY;{[MG]|[TS]}PKGANMTAY;{[MG]|[TS]}PKGNDASTY;{[MG]|[TS]}PKGGGDSTAY;{[MG]|[TS]}PKGGGSDTAY;{[MG]|[TS]}PKGNADSTY;{[MG]|[TS]}PKGNWSTY;{[MG]|[TS]}PKQNMTAY 5.7682;5.7682;5.504;5.3093;5.1749;4.9671;4.9671;4.9107;4.862;4.7323 -;-;-;-;-;-;-;-;-;- 1675 1 2.005 59265.7 1.0 1607 3248 4854 DOHH2_400M_050219_2,4857 DOHH2_400M_050219_2,4857,TSDNGKDGLAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4858 25.05 165.0 339340.0 25 0 24018.0 + 38551 TSSSHTLTY 9 102 498.7349902318469 995.4554275304936 2 498.7349731326103 MULTI CID FTMS 0 0 0 4854 335746.15625 1.0 0 0.0 4 Unmodified _TSSSHTLTY_ ENSG00000156642|ENST00000345330|NPTN;ENST00000563753.1_1_15:73884305-73925556:-|nuORF;nc|ENSG00000156642|Q9Y639-1|NPTN;nc|ENSG00000156642|Q9Y639-3|NPTN;nc|ENSG00000156642|Q9Y639-4|NPTN;nc|ENSG00000156642|Q9Y639-5|NPTN 60.38955033654506 0.025866396858536 2 {I|L}CKSTY 6 6 45.336 0.0 0.0 4.5543 0.0 0.0 282.12182264943743 0.0 282.12182264943743 0.0 23.54757507271316 0.0 0.0 0 0.242992819099939 0.0 1.5994850021680094 0.0 {I|L}CKSTY 4.5543 - 548 + 1 2.005 47180.9 1.0 1608 3248 4854 DOHH2_400M_050219_2,4858 DOHH2_400M_050219_2,4858,TSSSHTLTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4859 25.053 166.0 473980.0 25 0 40586.0 + 13800 HTDILKEKY 9 99 382.87618113831473 1145.6067140151442 3 382.8764221072197 MULTI CID FTMS 0 0 0 4854 228839.203125 0.5608294114191671 -2 0.087930679321289 5 Unmodified _HTDILKEKY_ ENSG00000104047|ENST00000403028|DTWD1;nc|ENSG00000104047|Q8N5C7-2|DTWD1 29.43715596616401 0.1566398223704148 2 [HT]D{I|L}{I|L}KEKY 9 0 [HT]D{I|L} + + 45.477 13.065 2.8022 3.9697 3.9697 51.555 0.0 0.0 0.0 0.0 32.35063057642063 0.0 0.0 0 1.424742501084005 0.0 0.2302046884880938 0.0 + + [HT]D{I|L}{I|L}KEKY 3.9697 + + 142 + 1 2.005 66791.9 1.0 1609 3248 4854 DOHH2_400M_050219_2,4859 DOHH2_400M_050219_2,4859,HTDILKEKY False True HTDILKEKY 25.053095 382.87642210722 2006519.25 4854.0 ENSG00000104047|ENST00000403028|DTWD1;;nc|ENSG00000104047|Q8N5C7-2|DTWD1 6.030346393585205 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4860 25.058 254.0 346350.0 25 0 27908.0 + 10652 FVQLCPYKGQG 11 99 620.3132283273969 1238.6119037215938 2 620.3130370974541 MULTI CID FTMS 0 0 0 4854 219470.875 0.2931550972052484 39 -1.5283584594726562 6 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 2 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 75.361 11.427 2.8842 6.0843 6.0843 59.686 0.0 0.0 0.0 0.0 55.919277910579055 0.0 0.0 0 2.6989700043360187 0.0 0.0 1.5286596949921218 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 6.0843 - 3029 + 1 2.005 72122.9 1.0 1610 3248 4854 DOHH2_400M_050219_2,4860 DOHH2_400M_050219_2,4860,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4861 25.063 268.0 204550.0 25 0 15355.0 + 6261 DTRPKLNAM 9 110 523.2769390016178 0 523.2756225466728 PEAK CID FTMS 0 0 0 4854 143539.953125 1.0 0 0.0 7 Unmodified _DTRPKLNAM_ ENSG00000003987|ENST00000180173|MTMR7;ENSG00000102043|ENST00000374852|MTMR8;ENSG00000139505|ENST00000381801|MTMR6;ENST00000461403.1_1_X:63557232-63569902:-|nuORF;nc|ENSG00000003987|Q9Y216-2|MTMR7;nc|ENSG00000139505|Q9Y217-2|MTMR6 27.628801355627647 0.1319135480000405 2 {I|L} 1 8 6.9897 0.0 0.0 0.66917 0.0 0.0 334.1303417710106 594.3034762018186 928.4338179728292 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.66917 + + 59 + 1 2.005 47729.0 1.0 1611 3248 4854 DOHH2_400M_050219_2,4861 DOHH2_400M_050219_2,4861,DTRPKLNAM False True DTRPKLNAM 25.062799 523.275622546673 1638450.125 4854.0 ENST00000461403.1_1_X:63557232-63569902:-|nuORF;;nc|ENSG00000003987|Q9Y216-2|MTMR7;;ENSG00000139505|ENST00000381801|MTMR6;;ENSG00000003987|ENST00000180173|MTMR7;;ENSG00000102043|ENST00000374852|MTMR8;;nc|ENSG00000139505|Q9Y217-2|MTMR6 5.221940994262695 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4862 25.067 210.0 190830.0 25 0 19308.0 + 7280 EETREVQNL 9 79 559.2770140983463 1116.5394752634925 2 559.2767211794853 MULTI CID FTMS 0 0 0 4854 111935.5859375 1.0 0 0.0 8 Unmodified _EETREVQNL_ ENSG00000136819|ENST00000372447|C9orf78;ENST00000461349.5_1_9:132593183-132597524:-|nuORF 20.453626601364224 0.2830276176381075 2 [VS]WW{[QG]|[NA]}QN{I|L} 9 6 + 16.564 0.0 0.0 1.4835 1.4835 78.118 0.0 0.0 0.0 1.306016206187179 0.5779185063149441 0.5779185063149441 16.563913098499498 0 0.4025608600955408 0.0 1.2134679910804405 0.0 [VS]WW{[QG]|[NA]}QN{I|L} 1.4835 - 88 1 2.005 37588.7 1.0 1612 3248 4854 DOHH2_400M_050219_2,4862 DOHH2_400M_050219_2,4862,EETREVQNL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4863 25.081 800.0 110710.0 25 0 6731.2 + -1 ASENNGGEGIHY 12 134 624.267973330391 1246.521393727582 2 624.2668334841728 MULTI CID FTMS 0 0 0 4854 88662.25 0.7034062254923866 -2 0.087930679321289 9 Oxidation (M) _GTEQEM(Oxidation (M))LYNF_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 24.020572477871973 0.4289996903560794 2 {[SA]|[TG]}ENNGGEG{I|L}HY 12 -1 + 84.33 0.0 0.0 6.7652 6.7652 83.139 0.0 0.0 0.0 17.49114457050446 4.121804477866476 4.121804477866476 3.6015144778263704 0 0.3054621874040891 1.154901959985743 1.055462187404089 1.1861818737241734 {[SA]|[TG]}ENNGGEG{I|L}HY;{[SA]|[TG]}ENNNEG{I|L}HY;{[SA]|[TG]}ENNGGEG{I|L}YH;{[SA]|[TG]}ENNGWG{I|L}HY;{[SA]|[TG]}ENNNEG{I|L}YH;{[SA]|[TG]}EGGNGGEG{I|L}HY;{[SA]|[TG]}ENNGWG{I|L}YH;{[SA]|[TG]}ENGGNEG{I|L}HY;{[SA]|[TG]}EGGNNEG{I|L}HY;{[SA]|[TG]}ENGGGGEG{I|L}HY 6.7652;6.4763;6.4345;6.3464;6.1456;6.0353;6.0157;5.744;5.744;5.7299 -;-;-;-;-;-;-;-;-;- 994 + 1 2.005 69291.4 0.5799999833106995 1613 3248 4854 DOHH2_400M_050219_2,4863 DOHH2_400M_050219_2,4863,GTEQEMLYNF False False ASENNGGEGIHY 25.080628 624.266833484173 583139.3125 4854.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 8.31961472829183 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4864 25.094 800.0 165190.0 25 0 10185.0 + -1 AEYYYQKYEDM 11 111 759.8085330568779 1517.6025131805557 2 759.8107177615166 MULTI CID FTMS 0 0 0 4854 84648.6875 0.4960556027472105 -1 0.0408668518066406 10 Oxidation (M) _AEYYYQKYEDM(Oxidation (M))_ REV__ENSG00000100626|ENST00000448469|GALNT16;REV__nc|ENSG00000100626|Q8N428-2|GALNT16 5.731851221503515 0.8481046878870278 2 [YE]E[PG]E{I|L}TAE 10 -1 80.506 0.0 0.0 5.3048 0.0 0.0 0.0 396.0896665022728 396.0896665022728 60.06749624278996 0.0 0.0 0.0 0 0.0 2.0 3.288106835214472 0.0 [YE]E[PG]E{I|L}TAE 5.3048 - 3232 1 2.005 96546.7 0.5199999809265137 1614 3248 4854 DOHH2_400M_050219_2,4864 DOHH2_400M_050219_2,4864,AEYYYQKYEDM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4865 25.108 800.0 187860.0 25 0 15396.0 -1 0 146 584.9471609043835 4087.579191064484 7 585.2325317263603 MULTI CID FTMS 0 0 0 4854 130847.2734375 1.0 0 0.0 11 2 YPVQ[RN]Y 7 -1 16.943 0.0 0.0 0.4145 0.0 0.0 3149.118829552453 0.0 3149.118829552453 0.0 4.815082168734147 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 YPVQ[RN]Y 0.4145 - 1011 + 1 2.005 112669.2 0.6499999761581421 1615 3248 4854 DOHH2_400M_050219_2,4865 DOHH2_400M_050219_2,4865, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4866 25.112 162.0 622700.0 25 0 120320.0 + 18156 KTQPHSLFL 9 95 357.5378286702899 1069.5916566110698 3 357.5375854372978 MULTI CID FTMS 0 0 0 4854 101667.984375 1.0 0 0.0 12 Unmodified _KTQPHSLFL_ REV__ENSG00000130656|ENST00000252951|HBZ 8.155526934196011 0.6299788542272896 2 {I|L} 1 -1 11.99 0.0 0.0 1.121 0.0 0.0 938.4969891079433 0.0 938.4969891079433 0.0 8.89075625191822 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.121 + + 14 + 1 2.005 89594.0 1.0 1616 3248 4854 DOHH2_400M_050219_2,4866 DOHH2_400M_050219_2,4866,KTQPHSLFL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4868 25.117 73.0 529220.0 25 0 57401.0 + 26344 NSELGSETRY 10 62 578.2677558468083 1154.5209587604163 2 578.2675659060478 MULTI CID FTMS 0 0 0 4867 497608.21875 0.1273941532016116 5 -0.178171157836914 1 Unmodified _NSELGSETRY_ ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1 40.72490554402381 0.149912226101682 2 [NS]E{I|L}GSERTY 10 2 + 64.334 0.0 0.0 5.5724 5.5724 87.691 0.0 0.0 0.0 51.569765582640095 10.969100130080562 10.969100130080562 12.272437815030628 0 1.0 1.5228787452803376 0.0 0.0 [NS]E{I|L}GSERTY;[NS]E{I|L}G[WR]MY;[NS]EWA[RV]MY 5.5724;4.5094;2.8162 -;-;- 120 + 1 2.009 34249.2 1.0 1617 3249 4867 DOHH2_400M_050219_2,4868 DOHH2_400M_050219_2,4868,NSELGSETRY False True NSELGSETRY 25.11693 578.267565906048 33342226.0 4867.0 nc|ENSG00000163374|Q9H869-6|YY1AP1;;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;;nc|ENSG00000163374|Q9H869-8|YY1AP1;;nc|ENSG00000163374|Q9H869|YY1AP1;;nc|ENSG00000163374|Q9H869-9|YY1AP1;;ENSG00000163374|ENST00000355499|YY1AP1;;nc|ENSG00000163374|Q9H869-4|YY1AP1;;nc|ENSG00000163374|Q9H869-7|YY1AP1;;nc|ENSG00000163374|Q9H869-5|YY1AP1;;nc|ENSG00000163374|Q9H869-3|YY1AP1;;ENST00000442834.6_1_1:155629450-155640310:-|nuORF 8.649556636810303 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4869 25.119 97.0 453370.0 25 0 26890.0 + 35506 STMSTNGIPR 10 78 540.261184100501 1078.507815267802 2 540.2610351443291 MULTI CID FTMS 0 0 0 4867 315222.28125 0.2220335118709007 5 -0.178171157836914 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 45.739877483867886 0.1051543674217965 2 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 61.463 0.0 0.0 5.6989 5.6989 79.495 0.0 0.0 0.0 4.884381005764311 3.590219426416681 3.590219426416681 3.590219426416681 0 0.9247425010840048 0.0 0.7302046884880937 0.0 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STNGR{I|L}P;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGGR{I|L}P;[HD]SSPNG{I|L}RP;[HD]SSPNG{I|L}PR;[HD]SSPNGR{I|L}P;[HD]SSPGGG{I|L}RP 5.6989;5.366;4.9774;4.8492;4.5163;4.1277;3.0711;2.7382;2.3496;2.2214 -;+;-;-;-;-;-;-;-;- + 273 + 1 2.009 40058.4 1.0 1618 3249 4867 DOHH2_400M_050219_2,4869 DOHH2_400M_050219_2,4869,STMSTNGIPR True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4871 25.124 96.0 783600.0 25 0 69112.0 + -1 SVCGMSMSPY 10 96 539.2063759171308 1076.3981989010615 2 539.2063476443291 MULTI CID FTMS 0 0 0 4870 234267.90625 0.3320614585668054 1 -0.1133022308349609 1 Oxidation (M) _SVCGM(Oxidation (M))SMSPY_ REV__L1PB1_dup10052|chr12:47254957-47257203:+|1.548341044108226|0.3758641288713036|2.04|48.0|85|1|anti-sense 6.723162845929126 0.6955379296933136 2 [VS]D 3 -1 24.922 0.0 0.0 2.3153 0.0 0.0 0.0 772.2485461513146 772.2485461513146 1.210149894766701 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [VS]D 2.3153 - 118 1 2.009 63141.5 1.0 1619 3250 4870 DOHH2_400M_050219_2,4871 DOHH2_400M_050219_2,4871,SVCGMSMSPY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4872 25.126 92.0 694710.0 25 0 107760.0 + 45297 YSEGYPGQRY 10 71 610.2724609888342 1218.5303690444682 2 610.2728759646416 MULTI CID FTMS 0 0 0 4870 536763.4375 0.1377865368403867 -3 0.124521255493164 2 Unmodified _YSEGYPGQRY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 60.07390631473393 0.0363923079357811 2 YSEGYP 6 4 71.146 0.0 0.0 5.8387 0.0 0.0 0.0 519.2327974908811 519.2327974908811 58.92790030352131 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + YSEGYP 5.8387 + + 197 + 1 2.009 53396.1 1.0 1620 3250 4870 DOHH2_400M_050219_2,4872 DOHH2_400M_050219_2,4872,YSEGYPGQRY True True YSEGYPGQRY 25.125682 610.272875964642 62147826.0 4870.0 nc|ENSG00000176974|P34896-2|SHMT1;;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;;ENSG00000176974|ENST00000316694|SHMT1;;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;;nc|ENSG00000176974|P34896-3|SHMT1 11.124141693115234 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4873 25.13 244.0 278320.0 25 0 21932.0 + 703 AENQTVVKY 9 92 526.2738545348475 1050.5331561364949 2 526.2740356326103 MULTI CID FTMS 0 0 0 4870 247904.0 1.0 0 0.0 3 Unmodified _AENQTVVKY_ ENSG00000030066|ENST00000378460|NUP160;ENST00000527126.1_1_11:47843172-47843701:-|nuORF;nc|ENSG00000030066|Q12769-3|NUP160;nc|ENSG00000030066|Q12769|NUP160 47.594388314883695 0.0456443387682827 2 {[CP]|[EA]}NQTVVKY 9 0 + 63.277 0.0 0.0 6.0233 6.0233 87.474 0.0 0.0 0.0 52.20233762398492 12.587418566968154 12.587418566968154 9.208187539523747 0 1.0941876774005248 0.8239087409443188 0.0 0.805462187404089 + + {[CP]|[EA]}NQTVVKY;{[CP]|[EA]}N[AG]TVVKY;{[CP]|[EA]}GGQTVVKY;{[CP]|[EA]}NRRDKY;{[CP]|[EA]}GG[AG]TVVKY;{[CP]|[EA]}GGRRDKY;{[CP]|[EA]}{I|L}{I|L}AEDKY;{[CP]|[EA]}{I|L}{I|L}[WE]KY;{[CP]|[EA]}{I|L}{I|L}AV{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y;{[CP]|[EA]}{I|L}{I|L}AV[DP][HS] 6.0233;5.1468;5.1468;4.9356;4.2744;4.0539;4.0422;2.5608;1.0009;0.57854 +;-;-;-;-;-;-;-;-;- + 245 + 1 2.009 58813.9 1.0 1621 3250 4870 DOHH2_400M_050219_2,4873 DOHH2_400M_050219_2,4873,AENQTVVKY True True AENQTVVKY 25.130241 526.27403563261 1239586.25 4870.0 ENST00000527126.1_1_11:47843172-47843701:-|nuORF;;nc|ENSG00000030066|Q12769-3|NUP160;;nc|ENSG00000030066|Q12769|NUP160;;ENSG00000030066|ENST00000378460|NUP160 8.403723239898682 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4874 25.138 432.0 137610.0 25 0 21889.0 -1 0 49 1123.367067085579 2244.719581237958 2 1123.868579089642 MULTI CID FTMS 0 0 0 4870 220973.25 0.9859736221522328 -3 0.124521255493164 4 2 D 1 -1 3.9794 0.0 0.0 0.17728 0.0 0.0 1722.5391135639331 404.1204586664706 2126.659572230404 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.17728 - 11 + 1 2.009 52228.7 1.0 1622 3250 4870 DOHH2_400M_050219_2,4874 DOHH2_400M_050219_2,4874, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4875 25.152 800.0 226910.0 25 0 25834.0 + 43588 YADYSGQQSTY 11 147 641.7646733187997 1281.5147937043994 2 641.7648193240166 MULTI CID FTMS 0 0 0 4870 189394.6875 0.2835128853035462 -1 0.0075244903564453 5 Unmodified _YADYSGQQSTY_ ENSG00000152795|ENST00000295470|HNRNPDL;nc|ENSG00000152795|O14979-2|HNRNPDL 79.59630418116434 0.0079568537026334 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSNAYQ 8 7 55.046 0.0 0.0 4.2954 0.0 0.0 0.0 366.1280872766405 366.1280872766405 26.24014470950823 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 1.066901560044258 0.7302046884880937 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSNAYQ 4.2954 - 5644 1 2.009 131534.3 0.75 1623 3250 4870 DOHH2_400M_050219_2,4875 DOHH2_400M_050219_2,4875,YADYSGQQSTY True True YADYSGQQSTY 25.151807 641.764819324017 7196846.0 4870.0 ENSG00000152795|ENST00000295470|HNRNPDL;;nc|ENSG00000152795|O14979-2|HNRNPDL 7.364389737447103 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4876 25.157 253.0 338440.0 25 0 78684.0 + 31424 RPMKTSVL 8 93 466.273301603362 930.532050273524 2 466.2732421755791 MULTI CID FTMS 0 0 0 4870 104453.78125 0.7254829803413254 1 -0.1133022308349609 6 Unmodified _RPMKTSVL_ nc|ENSG00000189266|Q9NPJ4-2|PNRC2 34.10243960390752 0.3329570729325616 2 [VS][TP]KTS 7 5 31.404 0.0 0.0 3.3749 0.0 0.0 0.0 227.13773809994908 227.13773809994908 12.855443491087826 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.8494850021680094 0.0 [VS][TP]KTS 3.3749 - 222 1 2.009 71407.1 1.0 1624 3250 4870 DOHH2_400M_050219_2,4876 DOHH2_400M_050219_2,4876,RPMKTSVL False True RPMKTSVL 25.156509 466.273242175579 781103.4375 4870.0 nc|ENSG00000189266|Q9NPJ4-2|PNRC2 6.735123634338379 2.0 True 8.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 4877 25.17 800.0 94544.0 25 0 11537.0 + 316 ADYQQTIKKY 10 118 629.327991091039 1256.641429248878 2 629.3286010622978 MULTI CID FTMS 0 0 0 4870 84574.6484375 1.0 0 0.0 7 Unmodified _ADYQQTIKKY_ ENSG00000204843|ENST00000628224|DCTN1;ENST00000466110.5_1_2:74595806-74598423:-|nuORF;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 53.40400417844725 0.0601721406801337 2 WYQQ[{I|L}T]KKY 9 2 + 61.989 0.0 0.0 4.9329 4.9329 75.061 0.0 0.0 0.0 44.55387759860295 14.09256854528806 14.09256854528806 2.503859178250778 0 0.6989700043360187 0.0 0.3807196863200844 1.089136830878453 WYQQ[{I|L}T]KKY;WYQ[WR]KKY;WYQ[AG][{I|L}T]KKY;WY[AG]Q[{I|L}T]KKY;WY[AG][WR]KKY;WWW{I|L}[Y{I|L}]KY 4.9329;4.7337;4.2001;4.2001;3.9966;1.3151 -;-;-;-;-;- 390 + 1 2.009 59417.2 0.5299999713897705 1625 3250 4870 DOHH2_400M_050219_2,4877 DOHH2_400M_050219_2,4877,ADYQQTIKKY True True ADYQQTIKKY 25.170347 629.328601062298 398300.0625 4870.0 nc|ENSG00000204843|Q14203-3|DCTN1;;ENSG00000204843|ENST00000628224|DCTN1;;nc|ENSG00000204843|Q14203-4|DCTN1;;nc|ENSG00000204843|Q14203-2|DCTN1;;nc|ENSG00000204843|Q14203-6|DCTN1;;nc|ENSG00000204843|Q14203-5|DCTN1;;ENST00000466110.5_1_2:74595806-74598423:-|nuORF 5.58654801050822 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4878 25.173 141.0 342700.0 25 0 53630.0 + 16582 KDLECDNFI 9 91 548.75065656407 1095.48676019494 2 548.7488281130791 MULTI CID FTMS 0 0 0 4870 243129.75 0.9279709982524548 -1 0.0075244903564453 8 Unmodified _KDLECDNFI_ REV__ENSG00000136010|ENST00000258494|ALDH1L2 15.847184025352805 0.4077185912009129 2 EQDWY 5 -1 28.805 0.0 0.0 2.6294 0.0 0.0 356.2137021888837 0.0 356.2137021888837 0.0 16.586367750682296 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.8494850021680094 EQDWY 2.6294 - 188 + 1 2.009 40644.1 1.0 1626 3250 4870 DOHH2_400M_050219_2,4878 DOHH2_400M_050219_2,4878,KDLECDNFI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4879 25.179 320.0 317960.0 25 0 41959.0 + 8958 FANGRSTGL 9 107 461.74070527772005 0 461.7407409548759 PEAK CID FTMS 0 0 0 4870 162815.75 1.0 0 0.0 9 Unmodified _FANGRSTGL_ ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A 32.30548876998284 0.0995446103270859 2 ANE 3 7 25.93 0.0 0.0 2.814 0.0 0.0 147.06826637509965 457.2454928033813 604.313759178481 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.8494850021680094 ANE 2.814 - 54 + 1 2.009 78843.5 1.0 1627 3250 4870 DOHH2_400M_050219_2,4879 DOHH2_400M_050219_2,4879,FANGRSTGL True True FANGRSTGL 25.179015 461.740740954876 907601.1875 4870.0 ENSG00000136518|ENST00000429709|ACTL6A;;nc|ENSG00000136518|O96019-2|ACTL6A;;ENSG00000077080|ENST00000160382|ACTL6B 2.529286781946818 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4880 25.194 800.0 170290.0 25 0 44350.0 -1 0 56 1181.8163248626674 3542.4271451882023 3 1182.152514636517 MULTI CID FTMS 0 0 0 4870 123479.9609375 0.248769157767151 -3 0.124521255493164 10 2 YG 2 -1 8.5835 0.0 0.0 0.24231 0.0 0.0 1457.5220681391772 1861.8277071588504 3319.3497752980275 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.24231 - 34 + 1 2.009 118131.7 0.449999988079071 1628 3250 4870 DOHH2_400M_050219_2,4880 DOHH2_400M_050219_2,4880, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4881 25.204 537.0 198900.0 25 0 23059.0 -1 EEIPVVICAAA 11 119 586.30344574247 0 586.3044921755791 PEAK CID FTMS 0 0 0 4870 104928.3046875 1.0 0 0.0 11 Carbamidomethyl (C) _EEIPVVIC(Carbamidomethyl (C))AAA_ ENSG00000120820|ENST00000360814|GLT8D2 8.745405648335112 0.4618489994582195 2 YPV 3 -1 10.467 0.0 0.0 0.89418 0.0 0.0 231.1300105261524 577.2553825649334 808.3853930910857 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YPV 0.89418 - 68 + 1 2.009 85497.0 1.0 1629 3250 4870 DOHH2_400M_050219_2,4881 DOHH2_400M_050219_2,4881,EEIPVVICAAA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4882 25.217 800.0 39057.0 25 0 3370.0 -1 0 44 1010.4706244900136 2018.926696046828 2 1010.970385730267 MULTI CID FTMS 0 0 0 4870 95047.8671875 1.0 0 0.0 12 2 [QP]GMH 5 -1 22.447 0.0 0.0 1.1118 0.0 0.0 0.0 1465.6659287951277 1465.6659287951277 12.269987279362624 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [QP]GMH 1.1118 - 114 1 2.009 32008.7 0.4699999988079071 1630 3250 4870 DOHH2_400M_050219_2,4882 DOHH2_400M_050219_2,4882, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4883 25.232 800.0 89576.0 25 0 6799.3 -1 HRRMLNDATY 10 109 646.8095195933233 1291.6044862534466 2 646.8112060427666 MULTI CID FTMS 0 0 0 4870 88557.40625 1.0 0 0.0 13 Oxidation (M) _HRRM(Oxidation (M))LNDATY_ ENSG00000154319|ENST00000284486|FAM167A;ENST00000531564.1_1_8:11281884-11301161:-|nuORF 16.149105407346934 0.5765757077271437 2 {NN|[MP]|[D{I|L}]|[EV]}P[Q{I|L}]QED[TA]Y 11 -1 + 46.774 0.0 0.0 3.6214 3.6214 80.855 0.0 0.0 0.0 20.668341737066 24.09820439583026 20.668341737066 13.63554504413873 0 0.7059771852360797 1.5228787452803376 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}P[Q{I|L}]QED[TA]Y;{NN|[MP]|[D{I|L}]|[EV]}P[Q{I|L}]QE{[WT]|[RM]}Y;[DP]{I|L}[Q{I|L}]QED[TA]Y;[KT]RQ[Y{M(Oxidation (M))|F}]D[TA]Y;[DP]{I|L}[Q{I|L}]QE{[WT]|[RM]}Y;[KT]RQ[Y{M(Oxidation (M))|F}]{[WT]|[RM]}Y 3.6214;2.5657;2.0211;1.9945;0.96541;0.94221 -;-;-;-;-;- 218 1 2.009 57741.1 0.5400000214576721 1631 3250 4870 DOHH2_400M_050219_2,4883 DOHH2_400M_050219_2,4883,HRRMLNDATY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4885 25.237 50.0 970950.0 25 0 84389.0 + + -1 SVDPTQTEY 9 81 520.2326512471852 1038.4507495611704 2 520.2327148318291 MULTI CID FTMS 0 0 0 4884 776462.625 0.3150111136523726 1 -0.0233516693115234 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ESEPLDPPN_ nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1;ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;ENST00000483030.1_1_1:115263111-115268953:-|nuORF 15.847184025352805 0.4077185912009129 2 ETQNY 5 -1 18.716 0.0 0.0 1.8023 0.0 0.0 385.18678579339536 0.0 385.18678579339536 0.0 -3.96005508894838 -3.96005508894838 0.0 0 0.0 0.0 0.0 0.0 ETQNY 1.8023 - 153 + 1 2.009 44627.2 1.0 1632 3251 4884 DOHH2_400M_050219_2,4885 DOHH2_400M_050219_2,4885,ESEPLDPPN False False SVDPTQTEY 25.236955 520.232714831829 12736931.0 4884.0 nc|ENSG00000009307|O75534-2|CSDE1;;nc|ENSG00000009307|O75534-4|CSDE1;;ENSG00000009307|ENST00000358528|CSDE1;;nc|ENSG00000009307|O75534-3|CSDE1;;ENST00000483030.1_1_1:115263111-115268953:-|nuORF 2.01371423403422 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4886 25.239 66.0 765860.0 25 0 44357.0 + 35291 SSNLRFNRL 9 81 553.80904394022 1105.60353494724 2 554.3118774294853 MULTI CID FTMS 0 0 0 4884 47490.0703125 0.0132137917703992 14 -0.3855915069580078 2 Unmodified _SSNLRFNRL_ REV__ENSG00000164190|ENST00000282516|NIPBL;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL 14.838274106304384 0.4350285940865338 2 DNAT{I|L}THY 8 -1 54.59 0.0 0.0 4.9376 0.0 0.0 172.18551060736087 0.0 172.18551060736087 0.0 28.72699260187857 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 DNAT{I|L}THY 4.9376 - 178 + 1 2.009 45322.1 1.0 1633 3251 4884 DOHH2_400M_050219_2,4886 DOHH2_400M_050219_2,4886,SSNLRFNRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4887 25.24 48.0 985800.0 25 0 58766.0 + 35203 SSDNATLTHY 10 86 554.7489228043183 1107.4832926754366 2 554.7488281130791 MULTI CID FTMS 0 0 0 4884 1082045.25 0.4487798064997976 -4 0.237823486328125 3 Unmodified _SSDNATLTHY_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 92.65332237495696 0.0091434457392194 2 {[CA]|SS}DNAT{I|L}THY 10 0 + 85.482 0.0 0.0 7.7186 7.7186 85.737 0.0 0.0 0.0 7.269987279362624 4.106829096975275 4.106829096975275 4.106829096975275 0 1.1989700043360187 0.0 1.2302046884880935 0.8494850021680094 + + {[CA]|SS}DNAT{I|L}THY;{[CA]|SS}DNAT{I|L}{I|L}C(Carbamidomethyl (C))Q;{[CA]|SS}DGGAT{I|L}{I|L}C(Carbamidomethyl (C))Q;{[CA]|SS}DGGAT{I|L}THY;{[CA]|SS}DNAQ[YV]PQ;{[CA]|SS}{[WN]|[YH]}T{I|L}THY;{[CA]|SS}DGGAQ[YV]PQ;{[CA]|SS}DNA[AG][YV]PQ;{[CA]|SS}{[WN]|[YH]}T{I|L}{I|L}C(Carbamidomethyl (C))Q;{[CA]|SS}DNAQ[YN][{I|L}P] 7.7186;7.3478;6.5202;6.124;5.2585;4.6249;4.4309;4.4309;4.2541;3.7848 +;-;-;-;-;-;-;-;-;- + 676 + 1 2.009 43546.5 1.0 1634 3251 4884 DOHH2_400M_050219_2,4887 DOHH2_400M_050219_2,4887,SSDNATLTHY True True SSDNATLTHY 25.239865 554.748828113079 52754996.0 4884.0 ENSG00000108021|ENST00000695737|TASOR2;;nc|ENSG00000108021|Q5VWN6-2|TASOR2 9.66092586517334 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4888 25.242 75.0 1000700.0 25 0 80006.0 + 17980 KRNDYVHAL 9 78 558.3016602584144 1114.5887675836286 2 558.3011352419853 MULTI CID FTMS 0 0 0 4884 850915.625 0.5790690032364899 -4 0.237823486328125 4 Unmodified _KRNDYVHAL_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 32.78568957990786 0.1150597335874693 2 YVHA{I|L} 5 4 47.563 0.0 0.0 4.2673 0.0 0.0 513.2658558576187 0.0 513.2658558576187 0.0 36.59379381312206 0.0 0.0 0 1.110924374808178 0.0 0.0 0.0 + YVHA{I|L} 4.2673 + + 49 1 2.009 61581.1 1.0 1635 3251 4884 DOHH2_400M_050219_2,4888 DOHH2_400M_050219_2,4888,KRNDYVHAL True True KRNDYVHAL 25.241609 558.301135241985 8194861.0 4884.0 ENSG00000126457|ENST00000454376|PRMT1;;nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;;nc|ENSG00000126457|Q99873-5|PRMT1 5.18427324295044 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4889 25.244 107.0 705330.0 25 0 141710.0 11420 GGRAPAGF 8 99 366.6930497914162 731.3715466496324 2 366.6921874880791 MULTI CID FTMS 0 0 0 4884 533748.375 0.6554897394435704 -2 0.1208267211914062 5 Unmodified _GGRAPAGF_ ENST00000555122.1_1_14:105421221-105423995:-|nuORF 2.889219685676258 0.8067950007271085 2 S{I|L}D 3 8 53.087 0.0 0.0 7.2586 0.0 0.0 0.0 413.2047518365844 413.2047518365844 30.61294467247886 0.0 0.0 0.0 0 0.5467716608392861 2.0 0.3807196863200844 0.0 S{I|L}D 7.2586 - 68 + 1 2.009 65774.1 1.0 1636 3251 4884 DOHH2_400M_050219_2,4889 DOHH2_400M_050219_2,4889,GGRAPAGF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4890 25.247 131.0 461690.0 25 0 50076.0 + 6165 DTAVRHVL 8 81 455.7589108520209 909.5032687708418 2 455.7587158083916 MULTI CID FTMS 0 0 0 4884 368904.34375 0.7927993833795483 -3 0.1969566345214843 6 Unmodified _DTAVRHVL_ ENSG00000149273|ENST00000531188|RPS3;nc|ENSG00000149273|P23396-2|RPS3 43.85829265575387 0.1697421968005898 2 HV{I|L} 3 5 32.193 0.0 0.0 3.5396 0.0 0.0 542.2815238082787 0.0 542.2815238082787 0.0 19.71340305007878 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.0 + HV{I|L} 3.5396 + + 63 1 2.009 54195.4 1.0 1637 3251 4884 DOHH2_400M_050219_2,4890 DOHH2_400M_050219_2,4890,DTAVRHVL False True DTAVRHVL 25.246527 455.758715808392 2271541.75 4884.0 nc|ENSG00000149273|P23396-2|RPS3;;ENSG00000149273|ENST00000531188|RPS3 6.780538558959961 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4891 25.25 187.0 345760.0 25 0 45602.0 + 7278 EETQIGGERY 10 84 591.2750629575818 1180.5355729819637 2 591.2757446169853 MULTI CID FTMS 0 0 0 4884 330428.3125 1.0 0 0.0 7 Unmodified _EETQIGGERY_ ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 37.07464296494664 0.1884581770199685 2 EETQ{I|L}GTVT{[CT]|[{M(Oxidation (M))|F}G]} 11 5 + 65.182 0.0 0.0 5.5214 5.5214 86.831 0.0 0.0 0.0 42.23317104303547 3.2079755744382368 3.2079755744382368 10.229735223316736 0 0.6747425010840047 1.6989700043360187 0.2887254899964357 0.4247425010840047 EETQ{I|L}GTVT{[CT]|[{M(Oxidation (M))|F}G]};EE[HK]G{I|L}QT[HC];EETQ{I|L}G{[DA]|[EG]}[YR];EET[AG]{I|L}GTVT{[CT]|[{M(Oxidation (M))|F}G]};EETQ{I|L}{[RE]|[WV]}[YN];EE[HK]G{I|L}[AG]T[HC];EET[AG]{I|L}G{[DA]|[EG]}[YR];EETQC[RP][YR];{[ET]|[MV]}[RH]G{I|L}QT[HC];[NP][NP]TG{I|L}QT[HC] 5.5214;4.6549;4.5463;4.3884;3.9259;3.8786;3.77;3.738;3.6765;3.2653 -;-;+;-;-;-;-;-;-;- + 256 + 1 2.009 56588.3 1.0 1638 3251 4884 DOHH2_400M_050219_2,4891 DOHH2_400M_050219_2,4891,EETQIGGERY False True EETQIGGERY 25.250146 591.275744616985 1426574.375 4884.0 nc|ENSG00000135624|Q99832-2|CCT7;;nc|ENSG00000135624|Q99832-4|CCT7;;ENSG00000135624|ENST00000258091|CCT7;;nc|ENSG00000135624|Q99832-3|CCT7 5.379040082295735 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4892 25.256 301.0 349700.0 25 0 41256.0 + 36953 TEYPVQRNY 9 87 585.2829368559757 1168.5513207787512 2 585.2825195193291 MULTI CID FTMS 0 0 0 4884 288223.625 0.7551135295585555 -3 0.1969566345214843 8 Unmodified _TEYPVQRNY_ ENSG00000133030|ENST00000651222|MPRIP;nc|ENSG00000133030|Q6WCQ1-2|MPRIP;nc|ENSG00000133030|Q6WCQ1-3|MPRIP;nc|ENSG00000133030|Q6WCQ1|MPRIP 37.97399986684836 0.0865783450051559 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YR]VPY[DP] 9 6 + 40.057 0.0 0.0 3.4279 3.4279 66.635 0.0 0.0 0.0 0.35997653271518 0.35997653271518 0.35997653271518 0.35997653271518 0 1.0 1.0457574905606752 0.0 0.4247425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YR]VPY[DP];{[ET]|[MV]}YPVQ[RN]Y;{[ET]|[MV]}YPV[AG][RN]Y;[VP][HT]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PY[DP];{[ET]|[MV]}YP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RP]Y;[NP][PA][W{I|L}]PY[DP];[PS][H{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PY[DP] 3.4279;3.3971;2.6091;2.3699;2.157;1.5342;1.1736 -;+;-;-;-;-;- + 94 1 2.009 82038.8 1.0 1639 3251 4884 DOHH2_400M_050219_2,4892 DOHH2_400M_050219_2,4892,TEYPVQRNY True True TEYPVQRNY 25.255665 585.282519519329 7557492.75 4884.0 nc|ENSG00000133030|Q6WCQ1-3|MPRIP;;nc|ENSG00000133030|Q6WCQ1|MPRIP;;ENSG00000133030|ENST00000651222|MPRIP;;nc|ENSG00000133030|Q6WCQ1-2|MPRIP 7.416127681732178 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4894 25.261 141.0 655230.0 25 0 61690.0 + 9600 FLLARPNIQL 10 107 395.575200236123 1183.703771308569 3 395.5751525759697 MULTI CID FTMS 0 0 0 4893 366077.3125 0.2459310698681338 -5 0.2611751556396484 1 Unmodified _FLLARPNIQL_ REV__ENSG00000091157|ENST00000254442|WDR7;REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7 21.74664581756881 0.480091245866545 2 E{I|L} 2 -1 25.217 0.0 0.0 2.1303 0.0 0.0 923.5659746942446 0.0 923.5659746942446 0.0 13.957465275951613 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 E{I|L} 2.1303 - 45 1 2.009 77936.9 1.0 1640 3252 4893 DOHH2_400M_050219_2,4894 DOHH2_400M_050219_2,4894,FLLARPNIQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4895 25.266 294.0 327360.0 25 0 29387.0 + 43788 YENEVALRQ 9 114 561.283451082496 1120.5523492317918 2 561.2830078005791 MULTI CID FTMS 0 0 0 4893 235410.328125 0.902438698603634 -1 0.0233516693115234 2 Unmodified _YENEVALRQ_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 59.36838082759317 0.0264317782606298 2 YENEVA{I|L}RQ 9 0 + 105.45 0.0 0.0 9.4103 9.4103 93.615 0.0 0.0 0.0 36.47817481888637 10.757659435244731 10.757659435244731 9.208187539523747 0 1.174742501084005 2.0 0.805462187404089 0.9604093769761876 + + YENEVA{I|L}RQ;YEGGEVA{I|L}RQ;YENTA[WK][{I|L}P];Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[WP]RQ 9.4103;8.5885;4.7323;1.1993 +;-;-;- + 229 + 1 2.009 75346.1 1.0 1641 3252 4893 DOHH2_400M_050219_2,4895 DOHH2_400M_050219_2,4895,YENEVALRQ True True YENEVALRQ 25.266296 561.283007800579 1240511.625 4893.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 6.065356731414795 2.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 4896 25.269 111.0 599800.0 25 0 143850.0 + 35321 SSTPHLSSY 9 85 489.7297880660804 977.4450231989608 2 489.7298461794853 MULTI CID FTMS 0 0 0 4893 304278.625 0.4106646354682005 -3 0.1441783905029297 3 Unmodified _SSTPHLSSY_ REV__ENSG00000100330|ENST00000401950|MTMR3;REV__ENST00000491251.1_1_22:30418516-30421787:+|nuORF;REV__nc|ENSG00000100330|Q13615-2|MTMR3;REV__nc|ENSG00000100330|Q13615-3|MTMR3 36.04419817259434 0.0971720506436186 2 {[CA]|SS}S{NN|[MP]|[D{I|L}]|[EV]}{I|L}[QT]Q 9 -1 + 20.639 0.0 0.0 2.1115 2.1115 70.713 0.0 0.0 0.0 2.191964632593585 3.649021710101653 2.191964632593585 5.5102999566398125 0 0.3807196863200844 0.0 0.75 0.0 {[CA]|SS}S{NN|[MP]|[D{I|L}]|[EV]}{I|L}[QT]Q;{[CA]|SS}S{[QV]|[N{I|L}]|[RA]|[KV]}N[QT]Q;{[CA]|SS}[WE]{I|L}[QT]Q;{[CA]|SS}[WK]N[QT]Q;[AG]D[{M(Oxidation (M))|F}V]{[QV]|[N{I|L}]|[RA]|[KV]}DQ;{[QD]|[EN]|[WG]|[KD]|[RS]}[{M(Oxidation (M))|F}V]{[QV]|[N{I|L}]|[RA]|[KV]}DQ;{[TV]|[{I|L}S]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[QA]DQ 2.1115;1.5478;1.4487;0.88499;0.41568;0.11124;0.084047 -;-;-;-;-;-;- 133 + 1 2.009 58900.1 1.0 1642 3252 4893 DOHH2_400M_050219_2,4896 DOHH2_400M_050219_2,4896,SSTPHLSSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4897 25.282 800.0 97100.0 25 0 3997.9 + -1 SPQKFLKSCHP 11 114 664.8444444806107 1327.6743360280211 2 664.8434326052666 MULTI CID FTMS 0 0 0 4893 110500.9296875 0.7117500470000673 1 -0.0267314910888671 4 Carbamidomethyl (C) _SPQKFLKSC(Carbamidomethyl (C))HP_ REV__ENSG00000140548|ENST00000268154|ZNF710 24.99096001346401 0.505407273373304 2 PSQSANV{I|L}{[DA]|[EG]}AQK 13 -1 + 124.43 0.0 0.0 9.3721 9.3721 88.508 0.0 0.0 0.0 26.32544729426173 5.096373105057566 5.096373105057566 5.096373105057566 0 2.5114393726401687 1.2218487496163564 0.8494850021680094 0.9802046884880936 PSQSANV{I|L}{[DA]|[EG]}AQK;PSQSANV{I|L}{[DA]|[EG]}AKQ;PS[AG]SANV{I|L}{[DA]|[EG]}AQK;PSQSAGGV{I|L}{[DA]|[EG]}AQK;PSQSANV{I|L}{[DA]|[EG]}A[AG]K;PS[AG]SANV{I|L}{[DA]|[EG]}AKQ;PSQSAGGV{I|L}{[DA]|[EG]}AKQ;PSQS{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{[DA]|[EG]}AQK;PSQS{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{[DA]|[EG]}AKQ;PSQS{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}WAQK 9.3721;8.9882;8.6888;8.6888;8.6888;8.3049;8.3049;7.4413;7.0574;6.8631 -;-;-;-;-;-;-;-;-;- 817 + 1 2.009 63461.2 0.5899999737739563 1643 3252 4893 DOHH2_400M_050219_2,4897 DOHH2_400M_050219_2,4897,SPQKFLKSCHP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4899 25.287 50.0 839380.0 25 0 78247.0 + 8847 EYVSSQLGRP 10 79 568.2924378179605 1134.570322702721 2 568.2924072146416 MULTI CID FTMS 0 0 0 4898 1038534.375 0.8931854186393929 2 -0.0622005462646484 1 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 17.11289562659939 0.5604042439455784 2 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 8 -1 36.165 0.0 0.0 3.1875 0.0 0.0 244.1427016869009 0.0 244.1427016869009 0.0 24.57116601236436 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3252574989159953 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 3.1875 - 150 + 1 2.005 37848.1 1.0 1644 3253 4898 DOHH2_400M_050219_2,4899 DOHH2_400M_050219_2,4899,EYVSSQLGRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4900 25.29 102.0 374160.0 25 0 27080.0 + 25835 NLDKNTVGY 9 64 512.2589734856608 1022.5033940381217 2 512.2584716677666 MULTI CID FTMS 0 0 0 4898 391016.34375 0.1497043629914888 3 -0.0806961059570312 2 Unmodified _NLDKNTVGY_ ENSG00000007923|ENST00000377577|DNAJC11;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;nc|ENSG00000007923|Q9NVH1-3|DNAJC11 24.020572477871973 0.2255576514309169 2 {[QV]|[N{I|L}]|[RA]|[KV]}QR{[WS]|[C(Carbamidomethyl (C)){I|L}]}GY 8 5 + 46.106 0.0 0.0 4.5091 4.5091 82.288 0.0 0.0 0.0 9.64210597324417 16.40978057358332 9.64210597324417 9.262137858390808 0 0.3252574989159953 1.5228787452803376 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}QR{[WS]|[C(Carbamidomethyl (C)){I|L}]}GY;{[QV]|[N{I|L}]|[RA]|[KV]}D{[NV]|[RG]}[KT]GY;{[QV]|[N{I|L}]|[RA]|[KV]}[AG]R{[WS]|[C(Carbamidomethyl (C)){I|L}]}GY;{[QV]|[N{I|L}]|[RA]|[KV]}Q[VG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}GY;{[QV]|[N{I|L}]|[RA]|[KV]}QR[HM][QP];{[QV]|[N{I|L}]|[RA]|[KV]}Q[VG][HM][QP];{[QV]|[N{I|L}]|[RA]|[KV]}[AG]R[HM][QP];{[QV]|[N{I|L}]|[RA]|[KV]}{[YC]|[HE]}[KS]A[QP];{[QS]|[NT]}[WR]Q[YR] 4.5091;3.6033;3.6033;3.6033;2.3809;1.4751;1.4751;1.3529;0.08993 -;-;-;-;-;-;-;-;- 324 + 1 2.005 37287.8 1.0 1645 3253 4898 DOHH2_400M_050219_2,4900 DOHH2_400M_050219_2,4900,NLDKNTVGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4902 25.294 111.0 450040.0 25 0 41657.0 + 40631 VLDETRTAY 9 63 534.2721712739258 1066.5297896146517 2 534.2717773318291 MULTI CID FTMS 0 0 0 4901 342325.8125 0.918658833742803 1 -0.0549392700195312 1 Unmodified _VLDETRTAY_ ENSG00000100325|ENST00000307790|ASCC2;ENST00000458594.5_1_22:30197094-30223519:-|nuORF;nc|ENSG00000100325|Q9H1I8-2|ASCC2;nc|ENSG00000100325|Q9H1I8-3|ASCC2 15.738622578938676 0.4106572216562794 2 V{I|L}DE 4 5 61.186 0.0 0.0 5.7369 0.0 0.0 0.0 607.2869967096311 607.2869967096311 47.2062251842808 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + V{I|L}DE 5.7369 + + 41 + 1 2.005 45525.3 1.0 1646 3254 4901 DOHH2_400M_050219_2,4902 DOHH2_400M_050219_2,4902,VLDETRTAY False True VLDETRTAY 25.294402 534.271777331829 3365614.75 4901.0 nc|ENSG00000100325|Q9H1I8-2|ASCC2;;ENSG00000100325|ENST00000307790|ASCC2;;nc|ENSG00000100325|Q9H1I8-3|ASCC2;;ENST00000458594.5_1_22:30197094-30223519:-|nuORF 4.308179219563802 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4903 25.298 176.0 376620.0 25 0 45688.0 + 23375 LTDPDGALAK 10 89 500.7690826199545 999.523612306709 2 500.7687866091728 MULTI CID FTMS 0 0 0 4901 204142.40625 0.3130902952680523 -3 0.0573444366455078 2 Unmodified _LTDPDGALAK_ ENSG00000175203|ENST00000548249|DCTN2;ENST00000551872.1_1_12:57927977-57928175:-|nuORF;ENST00000552390.5_1_12:57926966-57928919:-|nuORF;nc|ENSG00000175203|Q13561-2|DCTN2;nc|ENSG00000175203|Q13561-3|DCTN2 32.037481411007896 0.2488723560272515 2 {I|L}TDPDQ{I|L}AK 9 2 + 71.178 0.0 0.0 7.1212 7.1212 91.483 0.0 0.0 0.0 51.06595768378541 12.501096858561285 12.501096858561285 9.208187539523756 0 0.4247425010840047 2.0 0.0 0.4247425010840047 {I|L}TDPDQ{I|L}AK;{I|L}TDPD[AG]{I|L}AK;{I|L}TDPVV[DN]K 7.1212;6.1999;4.5727 -;+;- + 168 + 1 2.005 54635.0 1.0 1647 3254 4901 DOHH2_400M_050219_2,4903 DOHH2_400M_050219_2,4903,LTDPDGALAK False True LTDPDGALAK 25.297814 500.768786609173 3347154.75 4901.0 nc|ENSG00000175203|Q13561-3|DCTN2;;ENST00000551872.1_1_12:57927977-57928175:-|nuORF;;ENSG00000175203|ENST00000548249|DCTN2;;ENST00000552390.5_1_12:57926966-57928919:-|nuORF;;nc|ENSG00000175203|Q13561-2|DCTN2 8.529599984486898 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4904 25.303 288.0 279890.0 25 0 16801.0 + 29045 QEGQRYQAL 9 115 546.775739359809 1091.536925786418 2 546.7749511599541 MULTI CID FTMS 0 0 0 4901 219446.5625 0.7421566570721533 -2 0.0339927673339843 3 Unmodified _QEGQRYQAL_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484264.1_1_4:1746256-1746676:+|nuORF 71.70789743142352 0.0204387454931768 2 QE 2 7 35.28 0.0 0.0 3.2321 0.0 0.0 0.0 831.4113592145404 831.4113592145404 0.5632901123512184 0.0 0.0 0.0 0 0.5102396519197265 1.3979400086720375 0.0 0.0 + QE 3.2321 + + 1385 + 1 2.005 67035.8 1.0 1648 3254 4901 DOHH2_400M_050219_2,4904 DOHH2_400M_050219_2,4904,QEGQRYQAL True True QEGQRYQAL 25.303112 546.774951159954 1669348.25 4901.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENST00000484264.1_1_4:1746256-1746676:+|nuORF 7.56179157892863 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4905 25.317 800.0 123310.0 25 0 8812.7 31444 RPQSNWKESAN 11 121 658.8204342381051 1315.6263155430102 2 658.8199951052666 MULTI CID FTMS 0 0 0 4901 119974.3828125 0.8455119660533744 -1 0.0072612762451171 4 Unmodified _RPQSNWKESAN_ ENSG00000197077|ENST00000358431|KIAA1671 33.4449034751529 0.3133739643825231 2 {[SA]|[TG]}{[WN]|[YH]}[RV]PSQSAN 12 8 + 83.356 0.0 0.0 6.3359 6.3359 77.589 0.0 0.0 0.0 2.4865124202832334 51.876983880656056 2.4865124202832334 0.5192728816542314 0 1.424742501084005 1.0969100130080565 1.674742501084005 1.1549471895720984 {[SA]|[TG]}{[WN]|[YH]}[RV]PSQSAN;{[SA]|[TG]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[RV]PSQSAN;{[SA]|[TG]}GPSWRRQSAN;[DP][{M(Oxidation (M))|F}V][RV]PSQSAN;{[SA]|[TG]}[W{I|L}]QQPSQSAN;[Q{I|L}]{[C(Carbamidomethyl (C))G]|[NC]}[RV]PSQSAN;[PS]HH[RV]PSQSAN;{[QS]|[NT]}{[QD]|[EN]|[WG]|[KD]|[RS]}[RV]PSQSAN;{[SA]|[TG]}GPS{[DA]|[EG]}RRQSAN;{[SA]|[TG]}GPSWRR[AG]SAN 6.3359;6.2964;6.0563;5.996;5.6494;5.643;5.5035;5.4891;5.3647;5.3647 -;-;-;-;-;-;-;-;-;- 1247 1 2.005 73922.8 0.6200000047683716 1649 3254 4901 DOHH2_400M_050219_2,4905 DOHH2_400M_050219_2,4905,RPQSNWKESAN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4906 25.331 800.0 276840.0 25 0 34318.0 + 5361 DLKAASKL 8 156 423.2588167044586 844.5030804757172 2 423.2591430544853 MULTI CID FTMS 0 0 0 4901 101277.15625 0.5311195193411689 -1 0.0072612762451171 5 Unmodified _DLKAASKL_ ENSG00000102580|ENST00000602402|DNAJC3 67.83816525789305 0.1151378002238335 2 D{I|L}KAASK{I|L} 8 0 + 81.583 0.0 0.0 9.6605 9.6605 86.227 0.0 0.0 0.0 3.0102999566398125 8.32508912706237 3.0102999566398125 3.0102999566398125 0 1.3754223615525998 2.0 0.6237125054200234 0.4247425010840047 + + D{I|L}KAASK{I|L};{I|L}DKAASK{I|L};D{I|L}KAAS{I|L}K;{I|L}DKAAS{I|L}K;D{I|L}K[QT]K{I|L};{I|L}DK[QT]K{I|L};D{I|L}K[QT]{I|L}K;{I|L}DK[QT]{I|L}K;{I|L}[{M(Oxidation (M))|F}V][EP]K{I|L};{I|L}[{M(Oxidation (M))|F}V][EP]{I|L}K 9.6605;9.304;8.6747;8.3182;8.2025;7.8461;7.2167;6.8603;1.6309;0.64505 +;-;-;-;-;-;-;-;-;- + 415 + 1 2.005 173466.2 0.8999999761581421 1650 3254 4901 DOHH2_400M_050219_2,4906 DOHH2_400M_050219_2,4906,DLKAASKL True True DLKAASKL 25.330769 423.259143054485 774669.3125 4901.0 ENSG00000102580|ENST00000602402|DNAJC3 4.819062868754069 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4907 25.345 800.0 305250.0 25 0 79970.0 -1 0 79 689.2423301106477 688.2350536440476 1 689.2416869997978 MULTI CID FTMS 0 0 0 4901 103981.1640625 0.2494839964289134 -4 0.1706466674804687 6 2 GY 2 -1 17.959 0.0 0.0 2.6094 0.0 0.0 450.1368613606476 0.0 450.1368613606476 0.0 7.777739310168528 0.0 0.0 0 0.0 0.0 0.0 0.0 GY 2.6094 - 17 + 1 2.005 175304.8 0.5799999833106995 1651 3254 4901 DOHH2_400M_050219_2,4907 DOHH2_400M_050219_2,4907, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4909 25.349 39.0 835710.0 25 0 97191.0 + 38479 TSDNGKDGLAY 11 61 570.7619070901858 1139.5092612471717 2 570.7617065310478 MULTI CID FTMS 0 0 0 4908 1153989.5 0.2691209366799783 4 -0.1454696655273437 1 Unmodified _TSDNGKDGLAY_ ENSG00000105325|ENST00000441788|FZR1;nc|ENSG00000105325|Q9UM11-3|FZR1;nc|ENSG00000105325|Q9UM11|FZR1 23.80106514851385 0.5333463718001408 2 {[MG]|[TS]}PKAG[WC(Carbamidomethyl (C))]AY 10 6 + 47.102 0.0 0.0 4.1335 4.1335 76.646 0.0 0.0 0.0 6.759687322722812 32.40926274548464 6.759687322722812 6.53212513775344 0 1.424742501084005 0.0 0.25 0.0 {[MG]|[TS]}PKAG[WC(Carbamidomethyl (C))]AY;{[MG]|[TS]}PKQ[WC(Carbamidomethyl (C))]AY 4.1335;3.5603 -;- 74 1 2.005 34125.3 1.0 1652 3255 4908 DOHH2_400M_050219_2,4909 DOHH2_400M_050219_2,4909,TSDNGKDGLAY False True TSDNGKDGLAY 25.349239 570.761706531048 45553668.0 4908.0 nc|ENSG00000105325|Q9UM11|FZR1;;ENSG00000105325|ENST00000441788|FZR1;;nc|ENSG00000105325|Q9UM11-3|FZR1 7.464649677276611 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4910 25.363 800.0 188910.0 25 0 18231.0 + 10653 FVQLCPYKGQG 11 108 620.3132283273969 1238.6119037215938 2 620.3130370974541 MULTI CID FTMS 0 0 0 4908 150666.65625 0.2012508414091778 46 -2.192768096923828 2 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 16.149105407346934 0.6992268271266642 2 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 76.998 13.065 3.2976 6.2165 6.2165 60.137 0.0 0.0 0.0 0.0 63.33326798619368 0.0 0.0 0 2.6989700043360187 0.0 0.0 1.6465912507003608 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 6.2165 - 2299 + 1 2.005 114876.6 0.7400000095367432 1653 3255 4908 DOHH2_400M_050219_2,4910 DOHH2_400M_050219_2,4910,FVQLCPYKGQG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4912 25.368 60.0 1224700.0 25 0 97830.0 + 37223 TIKKRFKVL 9 99 378.2569247411342 1131.7489448236026 3 378.2565795779228 MULTI CID FTMS 0 0 0 4911 710200.375 0.891861952350335 -2 0.073434829711914 1 Unmodified _TIKKRFKVL_ ENSG00000182117|ENST00000328848|NOP10;ENST00000557912.1_1_15:34634171-34635317:-|nuORF 41.95555342248728 0.0647214845423414 2 {I|L}T{I|L} 3 7 46.682 0.0 0.0 4.1248 0.0 0.0 0.0 801.5089815729124 801.5089815729124 27.998037644757044 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}T{I|L} 4.1248 - 70 + 1 2.005 64622.8 1.0 1654 3256 4911 DOHH2_400M_050219_2,4912 DOHH2_400M_050219_2,4912,TIKKRFKVL True True TIKKRFKVL 25.367737 378.256579577923 5115229.5 4911.0 ENSG00000182117|ENST00000328848|NOP10;;ENST00000557912.1_1_15:34634171-34635317:-|nuORF 2.333709249893824 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4913 25.371 167.0 672250.0 25 0 169610.0 + 4983 DGRRKIAF 8 88 481.7805133889916 961.5464738447832 2 481.7797424197197 MULTI CID FTMS 0 0 0 4911 385302.40625 0.5526375756243601 -1 0.0184955596923828 2 Unmodified _DGRRKIAF_ ENSG00000231500|ENST00000439602|RPS18;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 13.50788311687929 0.7113601687236069 2 D{M(Oxidation (M))|F} 2 6 20.969 0.0 0.0 2.1808 0.0 0.0 0.0 696.4284140879643 696.4284140879643 -0.2287874528033739 0.0 -0.2287874528033739 0.0 0 0.0 0.0 0.0 0.0 D{M(Oxidation (M))|F} 2.1808 - 66 + 1 2.005 93483.0 1.0 1655 3256 4911 DOHH2_400M_050219_2,4913 DOHH2_400M_050219_2,4913,DGRRKIAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4914 25.374 134.0 491280.0 25 0 38643.0 + 8169 EPQAKNISV 9 100 493.26965864010816 984.5247643470163 2 493.2690002322197 MULTI CID FTMS 0 0 0 4911 402067.6875 0.2527718692782763 -4 0.1074275970458984 3 Unmodified _EPQAKNISV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF 14.838274106304384 0.4350285940865338 2 {I|L}NKAQ 5 8 26.696 0.0 0.0 2.7116 0.0 0.0 222.12083407951224 205.0622042291625 427.1830383086748 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 {I|L}NKAQ 2.7116 - 270 + 1 2.005 55858.5 1.0 1656 3256 4911 DOHH2_400M_050219_2,4914 DOHH2_400M_050219_2,4914,EPQAKNISV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4915 25.378 212.0 556220.0 25 0 138260.0 19369 LEQRLEIKR 9 82 592.8589350968026 1183.7033172604051 2 592.8588134646416 MULTI CID FTMS 0 0 0 4911 401057.5 1.0 0 0.0 4 Unmodified _LEQRLEIKR_ ENSG00000083223|ENST00000375963|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 13.042465956692816 0.4836390050082244 2 {I|L}E 2 7 35.802 0.0 0.0 3.0246 0.0 0.0 0.0 938.5560733597848 938.5560733597848 24.173494023588653 0.0 0.0 0.0 0 0.2614393726401688 1.2218487496163564 0.0 0.0 + {I|L}E 3.0246 + + 39 + 1 2.005 94333.8 1.0 1657 3256 4911 DOHH2_400M_050219_2,4915 DOHH2_400M_050219_2,4915,LEQRLEIKR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4916 25.384 340.0 296310.0 25 0 13859.0 -1 RPCPWNYGQF 10 100 662.8001749139434 1323.5857968946866 2 662.7988769412041 MULTI CID FTMS 0 0 0 4911 239532.34375 0.5858223536408063 -2 0.073434829711914 5 Carbamidomethyl (C) _RPC(Carbamidomethyl (C))PWNYGQF_ ENSG00000104055|ENST00000220420|TGM5;nc|ENSG00000104055|O43548-2|TGM5 32.30548876998284 0.2428506522065767 2 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F} 13 -1 + 126.54 0.0 0.0 9.5605 9.5605 92.121 0.0 0.0 0.0 9.01863755803666 16.642078980768062 9.01863755803666 9.01863755803666 0 1.075257498915995 1.3979400086720375 0.2614393726401688 2.2198565171985374 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}WAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}GEAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F} 9.5605;8.8791;8.8751;8.8751;8.8751;8.8633;8.8129;8.3796;8.1917;8.1917 -;-;-;-;-;-;-;-;-;- 4285 1 2.005 77629.4 1.0 1658 3256 4911 DOHH2_400M_050219_2,4916 DOHH2_400M_050219_2,4916,RPCPWNYGQF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4917 25.387 171.0 442710.0 25 0 67568.0 + 23382 LTDPEAAKY 9 89 504.2570930305636 1006.4996331279272 2 504.2585937380791 MULTI CID FTMS 0 0 0 4911 212932.703125 0.3359163999914811 -5 0.1307792663574218 6 Unmodified _LTDPEAAKY_ ENSG00000177628|ENST00000368373|GBA1;ENST00000459805.5_1_1:155184905-155186549:-|nuORF;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;nc|ENSG00000177628|P04062-2|GBA1;nc|ENSG00000177628|P04062-3|GBA1;nc|ENSG00000177628|P04062-4|GBA1;nc|ENSG00000177628|P04062-5|GBA1 32.78568957990786 0.1150597335874693 2 {I|L}TD[EP]AAKY 9 0 + 56.687 0.0 0.0 5.6321 5.6321 91.261 0.0 0.0 0.0 38.9150530438541 6.241535636908431 6.241535636908431 46.807011180249305 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}TD[EP]AAKY;[VP][PS]A[EP]D[VP] 5.6321;0.9816 +;- + 154 + 1 2.005 60383.0 1.0 1659 3256 4911 DOHH2_400M_050219_2,4917 DOHH2_400M_050219_2,4917,LTDPEAAKY True True LTDPEAAKY 25.387251 504.258593738079 3967826.0 4911.0 ENST00000459805.5_1_1:155184905-155186549:-|nuORF;;nc|ENSG00000177628|P04062-4|GBA1;;nc|ENSG00000177628|P04062-5|GBA1;;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;;ENSG00000177628|ENST00000368373|GBA1;;nc|ENSG00000177628|P04062-3|GBA1;;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;;nc|ENSG00000177628|P04062-2|GBA1 7.012158234914144 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4918 25.391 202.0 251530.0 25 0 22687.0 35683 SVEPLTQF 8 87 460.7413787653185 919.468204597437 2 460.7410461306572 MULTI CID FTMS 0 0 0 4911 174058.21875 0.8215498868202383 -1 0.0184955596923828 7 Unmodified _SVEPLTQF_ ENSG00000077097|ENST00000264331|TOP2B;nc|ENSG00000077097|Q02880-2|TOP2B;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant 19.256988751693697 0.6264283240490721 2 P{I|L}TK{M(Oxidation (M))|F} 5 4 27.968 0.0 0.0 3.0418 0.0 0.0 315.14209247452135 0.0 315.14209247452135 0.0 7.510693667498227 0.0 0.0 0 0.3807196863200844 0.0 0.6694451763165201 0.0 P{I|L}TK{M(Oxidation (M))|F} 3.0418 - 79 + 1 2.005 46167.4 1.0 1660 3256 4911 DOHH2_400M_050219_2,4918 DOHH2_400M_050219_2,4918,SVEPLTQF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4919 25.398 403.0 218650.0 25 0 19071.0 + 13243 TMEGGTLKY 9 131 507.7742937359053 1013.5340345386104 2 507.7730895876884 MULTI CID FTMS 0 0 0 4911 128460.0234375 0.9991404887929948 3 -0.1269741058349609 8 Unmodified _HIAWEVFL_ ENST00000567980.5_1_16:81819579-81955027:+|nuORF;ENSG00000197943|ENST00000564138|PLCG2 10.183394434864962 0.7604730176254005 2 Y 1 8 15.485 0.0 0.0 1.5278 0.0 0.0 832.4601495061871 0.0 832.4601495061871 0.0 -0.2861446540576651 -0.2861446540576651 0.0 0 0.0 0.0 0.0 0.0 Y 1.5278 - 294 + 1 2.005 72372.3 1.0 1661 3256 4911 DOHH2_400M_050219_2,4919 DOHH2_400M_050219_2,4919,HIAWEVFL False False TMEGGTLKY 25.39831 507.773089587688 442493.3125 4911.0 ENST00000567980.5_1_16:81819579-81955027:+|nuORF;;ENSG00000197943|ENST00000564138|PLCG2 0.0091751764218012 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4920 25.408 555.0 355650.0 25 0 36981.0 + 598 AEIVEGENHTY 11 137 631.2885858034865 1260.562618673773 2 631.2882568240166 MULTI CID FTMS 0 0 0 4911 124876.2421875 0.0468590594593803 -5 0.1307792663574218 9 Unmodified _AEIVEGENHTY_ ENSG00000196924|ENST00000369850|FLNA;ENST00000474358.5_1_X:153580213-153581146:-|nuORF;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;nc|ENSG00000196924|P21333-2|FLNA 81.9152076656658 0.0062322988290358 2 {[CP]|[EA]}{I|L}VEWNHTY 10 2 + 78.211 0.0 0.0 6.2045 6.2045 80.998 0.0 0.0 0.0 27.890821784153346 19.340612801023404 19.340612801023404 3.424226808222059 0 1.3807196863200843 0.0 2.4049471895720984 0.0 {[CP]|[EA]}{I|L}VEWNHTY;{[CP]|[EA]}{I|L}VEGENHTY;{[CP]|[EA]}{I|L}VEWGGHTY;{[CP]|[EA]}{I|L}VEGEGGHTY;{[CP]|[EA]}{I|L}VWENHTY;{[ES]|[DT]|[{I|L}C]}PVEWNHTY;{[CP]|[EA]}{I|L}V{M(Oxidation (M))|F}YE{NN|[MP]|[D{I|L}]|[EV]}Y;{[CP]|[EA]}{I|L}VWEGGHTY;{[CP]|[EA]}{I|L}VEG{M(Oxidation (M))|F}DD{I|L}[PG];{[ES]|[DT]|[{I|L}C]}PVEWGGHTY 6.2045;5.9328;5.4775;5.2087;5.1092;4.8536;4.645;4.3821;4.2211;4.1266 -;+;-;-;-;-;-;-;-;- + 5045 + 1 2.005 154552.8 1.0 1662 3256 4911 DOHH2_400M_050219_2,4920 DOHH2_400M_050219_2,4920,AEIVEGENHTY True True AEIVEGENHTY 25.408066 631.288256824017 28000314.0 4911.0 ENSG00000196924|ENST00000369850|FLNA;;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;;ENST00000474358.5_1_X:153580213-153581146:-|nuORF;;nc|ENSG00000196924|P21333-2|FLNA 8.434453646341959 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4921 25.42 678.0 178380.0 25 0 15101.0 + 43436 WSDSPGQHY 9 147 538.7251827900487 1075.4358126468974 2 538.7251464724541 MULTI CID FTMS 0 0 0 4911 91074.953125 0.4765839814945863 -1 0.0184955596923828 10 Unmodified _WSDSPGQHY_ ENSG00000160999|ENST00000444095|SH2B2;nc|ENSG00000160999|O14492-2|SH2B2 65.23502041540118 0.0231836506122253 2 WSDSPGQHY 9 0 + 85.953 0.0 0.0 7.9924 7.9924 94.328 0.0 0.0 0.0 63.099332062219474 8.009197854904983 8.009197854904983 12.411479331297016 0 0.5269763493273799 1.5228787452803376 0.4247425010840047 0.8633643341304672 + + WSDSPGQHY;WSDS[KT][CS]Y;WSDSPG[AG]HY;WSD[KT]S[CS]Y;WSDSY[HQ]GP;WSDSP{[WS]|[C(Carbamidomethyl (C)){I|L}]}DP;WSDSPG[HS]G{M(Oxidation (M))|F};WSDSY[HA]NP;WSDS[TA]HC(Carbamidomethyl (C)){I|L};{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PSDS[PA] 7.9924;6.8383;6.3333;5.5912;5.2316;5.0261;4.9772;4.9517;4.7531;4.4531 +;-;-;-;-;-;-;-;-;- + 1040 + 1 2.005 94660.0 1.0 1663 3256 4911 DOHH2_400M_050219_2,4921 DOHH2_400M_050219_2,4921,WSDSPGQHY True True WSDSPGQHY 25.419862 538.725146472454 942146.9375 4911.0 ENSG00000160999|ENST00000444095|SH2B2;;nc|ENSG00000160999|O14492-2|SH2B2 8.193986256917318 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4923 25.425 42.0 1179200.0 25 0 205560.0 + 45298 YSEGYPGQRY 10 53 610.2724609888342 1218.5303690444682 2 610.2722656130791 MULTI CID FTMS 0 0 0 4922 1093069.25 0.280589578130904 4 -0.1135749816894531 1 Unmodified _YSEGYPGQRY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 43.77239144664712 0.1177314611616471 2 YSEGYY 6 4 72.652 0.0 0.0 5.9622 0.0 0.0 0.0 453.2228571182663 453.2228571182663 62.92078796995845 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 YSEGYY 5.9622 - 79 + 1 2.005 44516.3 1.0 1664 3257 4922 DOHH2_400M_050219_2,4923 DOHH2_400M_050219_2,4923,YSEGYPGQRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4924 25.432 410.0 140470.0 25 0 13001.0 + 43589 YADYSGQQSTY 11 103 641.7646733187997 1281.5147937043994 2 641.7648193240166 MULTI CID FTMS 0 0 0 4922 105733.0 0.1582761813305869 6 -0.1702213287353515 2 Unmodified _YADYSGQQSTY_ ENSG00000152795|ENST00000295470|HNRNPDL;nc|ENSG00000152795|O14979-2|HNRNPDL 27.628801355627647 0.4434699450731472 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D 3 8 22.676 0.0 0.0 1.7695 0.0 0.0 0.0 929.3641949097306 929.3641949097306 1.4646872391696064 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D 1.7695 + + 526 1 2.005 47507.9 1.0 1665 3257 4922 DOHH2_400M_050219_2,4924 DOHH2_400M_050219_2,4924,YADYSGQQSTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4925 25.436 236.0 302660.0 25 0 29619.0 + 6044 DSENQRLAY 9 109 547.7560818720593 1093.4976108109186 2 548.2574340701103 MULTI CID FTMS 0 0 0 4922 238917.3125 1.0 0 0.0 3 Unmodified _DSEKPDGISF_ ENST00000447755.1_1_2:196859457-196859526:-|nuORF;nc|ENSG00000112242|O00716-2|E2F3;ENSG00000112242|ENST00000346618|E2F3 14.838274106304384 0.5985701837916485 2 ENQ[R{I|L}]AY 7 8 24.201 0.0 0.0 2.2131 0.0 0.0 201.0593916720498 0.0 201.0593916720498 0.0 13.231457247781648 0.0 0.0 0 0.0 0.0 0.0 0.0 ENQ[R{I|L}]AY 2.2131 - 149 + 1 2.005 58887.5 1.0 1666 3257 4922 DOHH2_400M_050219_2,4925 DOHH2_400M_050219_2,4925,DSEKPDGISF False False DSENQRLAY 25.436259 548.25743407011 1068447.375 4922.0 ENST00000447755.1_1_2:196859457-196859526:-|nuORF;;nc|ENSG00000112242|O00716-2|E2F3;;ENSG00000112242|ENST00000346618|E2F3 8.313053925832113 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4926 25.443 366.0 196560.0 25 0 15357.0 12310 GSDYYDPSEP 10 105 565.2177969324472 1128.4210409316945 2 565.2178222537041 MULTI CID FTMS 0 0 0 4922 213506.765625 1.0 0 0.0 4 Unmodified _GSDYYDPSEP_ ENSG00000061936|ENST00000261674|SFSWAP;ENST00000538548.5_1_12:132198725-132271134:+|nuORF;nc|ENSG00000061936|Q12872-2|SFSWAP 25.399314129420983 0.3980215340001851 2 GK{I|L}TTCD[SG]D 10 8 52.409 0.0 0.0 4.6445 0.0 0.0 133.0200672834 0.0 133.0200672834 0.0 12.92796583575644 0.0 0.0 0 0.1747425010840047 0.0 0.3494850021680094 0.0 GK{I|L}TTCD[SG]D 4.6445 - 233 1 2.005 60714.0 1.0 1667 3257 4922 DOHH2_400M_050219_2,4926 DOHH2_400M_050219_2,4926,GSDYYDPSEP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4927 25.448 274.0 104050.0 25 0 17381.0 -1 0 28 1123.367067085579 2244.719581237958 2 1123.868457019329 MULTI CID FTMS 0 0 0 4922 192971.59375 0.861031374893462 4 -0.1135749816894531 5 2 D 1 -1 5.4846 0.0 0.0 0.24433 0.0 0.0 1722.5433860248706 404.1190279596313 2126.662413984502 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.24433 - 3 + 1 2.005 34252.1 1.0 1668 3257 4922 DOHH2_400M_050219_2,4927 DOHH2_400M_050219_2,4927, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4928 25.453 285.0 295560.0 25 0 74956.0 + + 14188 VENPEHNDF 9 86 550.812790960465 1099.61102898773 2 550.8126708865166 MULTI CID FTMS 0 0 0 4922 169890.890625 0.8765789562365839 -1 0.0567684173583984 6 Unmodified _IDHKHPLLQ_ nc|ENSG00000168385|Q15019-2|SEPTIN2;ENSG00000168385|ENST00000391971|SEPTIN2;ENST00000481500.1_1_2:242277175-242285749:+|nuORF;nc|ENSG00000168385|Q15019-3|SEPTIN2 15.847184025352805 0.4077185912009129 2 {NN|[MP]|[D{I|L}]|[EV]}Q 3 -1 29.749 0.0 0.0 2.7054 0.0 0.0 0.0 740.4096794606393 740.4096794606393 10.00785172917456 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}Q 2.7054 - 85 1 2.005 70409.2 1.0 1669 3257 4922 DOHH2_400M_050219_2,4928 DOHH2_400M_050219_2,4928,IDHKHPLLQ False False VENPEHNDF 25.453205 550.812670886517 478253.28125 4922.0 nc|ENSG00000168385|Q15019-2|SEPTIN2;;ENSG00000168385|ENST00000391971|SEPTIN2;;ENST00000481500.1_1_2:242277175-242285749:+|nuORF;;nc|ENSG00000168385|Q15019-3|SEPTIN2 3.74869441986084 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4929 25.458 255.0 247520.0 25 0 16515.0 + 380 AEDKENYKKFY 11 80 478.9017399578609 1433.6833904737828 3 478.9014465212822 MULTI CID FTMS 0 0 0 4922 153540.0 0.4391563958371097 -2 0.0752639770507812 7 Unmodified _AEDKENYKKFY_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 25.154963734998336 0.5015564154082124 2 AED{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YN]KK{M(Oxidation (M))|F}Y 11 0 + 68.064 0.0 0.0 4.7475 4.7475 79.087 0.0 0.0 0.0 42.88682923322955 14.190166918179614 14.190166918179614 6.575773191777927 0 0.7614393726401688 1.5228787452803376 0.5 0.0 + + AED{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YN]KK{M(Oxidation (M))|F}Y;AEWW[YN]KK{M(Oxidation (M))|F}Y;{[CP]|[EA]}QKK[YN]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))H] 4.7475;4.2888;1.1684 +;-;- + 245 + 1 2.005 54781.8 1.0 1670 3257 4922 DOHH2_400M_050219_2,4929 DOHH2_400M_050219_2,4929,AEDKENYKKFY False True AEDKENYKKFY 25.457932 478.9017 1275955.625 4922.0 ENSG00000096384|ENST00000371646|HSP90AB1;;nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1 7.178925514221191 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4931 25.475 800.0 125130.0 25 0 7333.6 -1 ENMPCDEEPSQ 11 121 676.2426301549166 1350.470707376633 2 676.2424194216728 MULTI CID FTMS 0 0 0 4930 53784.99609375 0.5206399235399295 1 -0.0321559906005859 1 Carbamidomethyl (C),Oxidation (M) _ENM(Oxidation (M))PC(Carbamidomethyl (C))DEEPSQ_ ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400 8.745405648335112 0.8338865417133445 2 {M(Oxidation (M))|F}AD[HD]{M(Oxidation (M))|F}YQ 8 -1 29.496 0.0 0.0 2.1841 0.0 0.0 309.05247425643785 0.0 309.05247425643785 0.0 9.38522701248629 0.0 0.0 0 0.0 0.0 0.0 1.0189301784845295 {M(Oxidation (M))|F}AD[HD]{M(Oxidation (M))|F}YQ 2.1841 - 729 + 1 2.005 76120.0 0.5600000023841858 1671 3258 4930 DOHH2_400M_050219_2,4931 DOHH2_400M_050219_2,4931,ENMPCDEEPSQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4932 25.477 67.0 624000.0 25 0 37116.0 + 42364 VTDGPGNYKY 10 76 557.2639688518391 1112.513384770478 2 557.2642089724541 MULTI CID FTMS 0 0 0 4930 508355.0 0.5231729921481727 -5 0.1755142211914062 2 Unmodified _VTDGPGNYKY_ ENSG00000088812|ENST00000262919|ATRN;nc|ENSG00000088812|O75882-2|ATRN;nc|ENSG00000088812|O75882-3|ATRN 31.26834338654808 0.266153677697784 2 VTDG{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}K 8 5 67.256 0.0 0.0 6.0454 0.0 0.0 0.0 178.05166040592033 178.05166040592033 57.255631547766654 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 VTDG{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}K 6.0454 - 196 + 1 2.005 40345.8 1.0 1672 3258 4930 DOHH2_400M_050219_2,4932 DOHH2_400M_050219_2,4932,VTDGPGNYKY False True VTDGPGNYKY 25.476615 557.264208972454 14169767.0 4930.0 ENSG00000088812|ENST00000262919|ATRN;;nc|ENSG00000088812|O75882-3|ATRN;;nc|ENSG00000088812|O75882-2|ATRN 9.405031204223633 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4933 25.48 173.0 380030.0 25 0 22740.0 -1 TSHLWKMF 8 98 533.26445227298 0 533.2643310427666 PEAK CID FTMS 0 0 0 4930 203430.734375 0.7766219127879465 -1 0.0380496978759765 3 Oxidation (M) _TSHLWKM(Oxidation (M))F_ ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1 24.67388899826682 0.3296343502680589 2 K{I|L}HS 4 -1 24.469 0.0 0.0 2.2986 0.0 0.0 498.1963717317036 98.02533136539296 596.2217030970965 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.805462187404089 0.0 K{I|L}HS 2.2986 - 134 + 1 2.005 56250.8 1.0 1673 3258 4930 DOHH2_400M_050219_2,4933 DOHH2_400M_050219_2,4933,TSHLWKMF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4934 25.49 571.0 207200.0 25 0 38612.0 + 2556 ASFFRARQTLY 11 130 453.9086339240912 1358.7040723724735 3 453.9084045290947 MULTI CID FTMS 0 0 0 4930 107785.890625 1.0 0 0.0 4 Unmodified _ASFFRARQTLY_ REV__ENSG00000179292|ENST00000327259|TMEM151A 7.0370850670814 0.8419465095438622 2 {[SA]|[TG]}TAHHT 7 -1 35.775 0.0 0.0 2.633 0.0 0.0 0.0 650.3549898736936 650.3549898736936 15.061216379505067 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 {[SA]|[TG]}TAHHT 2.633 - 418 + 1 2.005 98512.9 1.0 1674 3258 4930 DOHH2_400M_050219_2,4934 DOHH2_400M_050219_2,4934,ASFFRARQTLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4936 25.499 344.0 234950.0 25 0 33435.0 + 35188 SSDDSKLEY 9 108 522.2300124764256 1042.445472019651 2 522.2300292849541 MULTI CID FTMS 0 0 0 4935 106630.03125 0.0369375196478414 8 -0.2074012756347656 1 Unmodified _SSDDSKLEY_ ENSG00000114331|ENST00000326793|ACAP2 41.95555342248728 0.0647214845423414 2 {[CA]|SS}DR{I|L}ESSY 9 5 + 50.803 0.0 0.0 4.8735 4.8735 80.334 0.0 0.0 0.0 8.142492736872597 33.81359477195964 8.142492736872597 7.562441647339071 0 1.3807196863200843 0.0 1.2416440611282624 0.0 {[CA]|SS}DR{I|L}ESSY;{[CA]|SS}[R{I|L}]DESSY;[KS]D{I|L}DESSY;{[CA]|SS}[VG]{I|L}DESSY;{[CA]|SS}D[VG]{I|L}ESSY;DDSK{I|L}ESSY;{[CA]|SS}[R{I|L}]EDSSY;{[C(Carbamidomethyl (C))E]|[WC]}R{I|L}ESSY;[KS]D{I|L}EDSSY;{[CA]|SS}[VG]{I|L}EDSSY 4.8735;4.148;4.0709;4.0282;3.9901;3.9593;3.855;3.8213;3.7779;3.7351 -;-;-;-;-;-;-;-;-;- 528 1 2.005 67962.2 1.0 1675 3259 4935 DOHH2_400M_050219_2,4936 DOHH2_400M_050219_2,4936,SSDDSKLEY True True SSDDSKLEY 25.498699 522.230029284954 13133617.0 4935.0 ENSG00000114331|ENST00000326793|ACAP2 6.819021224975586 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4937 25.502 149.0 501990.0 25 0 28134.0 + 29043 QEGKLDRTF 9 90 365.19299909553024 1092.5571678867907 3 365.1922180056572 MULTI CID FTMS 0 0 0 4935 283618.65625 0.6179701935060747 -3 0.1269741058349609 2 Unmodified _QEGKLDRTF_ ENSG00000065518|ENST00000184266|NDUFB4;ENST00000485064.1_1_3:120321042-120321114:+|nuORF 12.240655878213236 0.5053430591993562 2 {M(Oxidation (M))|F} 1 8 11.99 0.0 0.0 1.0974 0.0 0.0 927.4778965018282 0.0 927.4778965018282 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0974 + + 59 + 1 2.005 63443.2 1.0 1676 3259 4935 DOHH2_400M_050219_2,4937 DOHH2_400M_050219_2,4937,QEGKLDRTF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4938 25.505 186.0 440260.0 25 0 58220.0 + -1 SVMYKLATT 9 92 515.2674892101394 1028.520425487079 2 515.2679931521416 MULTI CID FTMS 0 0 0 4935 279104.46875 0.2654327258047049 -6 0.2076702117919922 3 Oxidation (M) _SVM(Oxidation (M))YKLATT_ REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8;REV__nc|ENSG00000189195|Q5XKL5|BTBD8 14.838274106304384 0.4350285940865338 2 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K 9 -1 + 68.202 0.0 0.0 6.6311 6.6311 93.681 0.0 0.0 0.0 53.55397298147196 17.408037477650637 17.408037477650637 24.247425010840047 0 0.7742275032520141 2.0 0.2742275032520141 0.5356668758921829 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}Y[PG]TT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}YT[PG]T{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}V{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]K 6.6311;4.2736;2.352;1.6978;0.53157 -;-;-;-;- 118 + 1 2.005 67527.6 1.0 1677 3259 4935 DOHH2_400M_050219_2,4938 DOHH2_400M_050219_2,4938,SVMYKLATT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4939 25.508 146.0 629380.0 25 0 44928.0 + 14303 IELDIKEQI 9 115 367.5448260943183 1099.6126488831549 3 367.5444824099541 MULTI CID FTMS 0 0 0 4935 252440.84375 0.7168051853486535 1 -0.0320644378662109 4 Unmodified _IELDIKEQI_ REV__ENSG00000182010|ENST00000373789|RTKN2;REV__nc|ENSG00000182010|Q8IZC4-2|RTKN2;REV__nc|ENSG00000182010|Q8IZC4-3|RTKN2 27.628801355627647 0.1796483985696185 2 EQ{I|L} 3 -1 25.406 0.0 0.0 2.3105 0.0 0.0 711.4135272546258 0.0 711.4135272546258 0.0 2.1433312410781724 0.0 0.0 0 0.0 0.0 0.5 0.3494850021680094 EQ{I|L} 2.3105 + + 136 1 2.005 78485.8 1.0 1678 3259 4935 DOHH2_400M_050219_2,4939 DOHH2_400M_050219_2,4939,IELDIKEQI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4940 25.522 800.0 114650.0 25 0 18135.0 2879 AVDWMGKNLY 10 133 598.7934294436334 1195.572305954067 2 598.7925292849541 MULTI CID FTMS 0 0 0 4935 97689.015625 0.716210143243243 -1 0.0321559906005859 5 Unmodified _AVDWMGKNLY_ ENSG00000162337|ENST00000294304|LRP5;ENST00000529993.5_1_11:68171724-68216535:+|nuORF 27.628801355627647 0.3479284626772844 2 SAN{I|L}Y 5 7 52.607 0.0 0.0 4.4002 0.0 0.0 629.3028412927428 0.0 629.3028412927428 0.0 33.407035088656 0.0 0.0 0 0.5 0.0 1.1421590589602533 0.4247425010840047 SAN{I|L}Y 4.4002 - 1698 1 2.005 75670.8 0.5600000023841858 1679 3259 4935 DOHH2_400M_050219_2,4940 DOHH2_400M_050219_2,4940,AVDWMGKNLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4942 25.528 109.0 769000.0 25 0 51583.0 + 7939 ELRRKIQEL 9 101 395.575200236123 1183.703771308569 3 395.5750915408134 MULTI CID FTMS 0 0 0 4941 464058.09375 0.3117546473926987 3 -0.0679512023925781 1 Unmodified _ELRRKIQEL_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1;UHRF1-KDM4B|1|fusion;UHRF1-KDM4B|2|fusion 24.020572477871973 0.2255576514309169 2 WQV{I|L}E{I|L} 6 6 30.865 0.0 0.0 2.6075 0.0 0.0 397.26231581855626 0.0 397.26231581855626 0.0 13.940162615404072 0.0 0.0 0 0.5484550065040282 0.0 0.0 0.75 WQV{I|L}E{I|L} 2.6075 - 68 1 2.007 72249.4 1.0 1680 3260 4941 DOHH2_400M_050219_2,4942 DOHH2_400M_050219_2,4942,ELRRKIQEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4943 25.531 153.0 343440.0 25 0 17462.0 + 35204 SSDNATLTHY 10 96 554.7489228043183 1107.4832926754366 2 554.7487670779228 MULTI CID FTMS 0 0 0 4941 357126.6875 0.1481188016047976 5 -0.095773696899414 2 Unmodified _SSDNATLTHY_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 96.36657018975838 0.0088773658760237 2 {[CA]|SS}DNAT{I|L}THY 10 0 + 79.729 0.0 0.0 7.1992 7.1992 88.221 0.0 0.0 0.0 7.269987279362624 7.289332277134619 7.269987279362624 7.289332277134619 0 1.4731975075880328 0.0 0.8494850021680094 0.3807196863200844 + + {[CA]|SS}DNAT{I|L}THY;{[CA]|SS}DNAT{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}Q;{[CA]|SS}DGGAT{I|L}THY;{[CA]|SS}DGGAT{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}Q;{[CA]|SS}DNAY{[QV]|[N{I|L}]|[RA]|[KV]}PQ;{[CA]|SS}DGGAY{[QV]|[N{I|L}]|[RA]|[KV]}PQ;{[CA]|SS}{[WN]|[YH]}T{I|L}THY;{[CA]|SS}{[WN]|[YH]}T{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}Q;{[CA]|SS}{[WN]|[YH]}Y{[QV]|[N{I|L}]|[RA]|[KV]}PQ;{[CA]|SS}D[WE]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PQ 7.1992;6.541;6.0279;5.7135;5.0713;4.2438;4.2414;3.5832;2.497;2.1573 +;-;-;-;-;-;-;-;-;- + 397 + 1 2.007 47307.2 1.0 1681 3260 4941 DOHH2_400M_050219_2,4943 DOHH2_400M_050219_2,4943,SSDNATLTHY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4944 25.533 100.0 913580.0 25 0 82989.0 + 44204 YLGAKPRSL 9 84 502.7983130387709 1003.5820731443418 2 502.7980529665947 MULTI CID FTMS 0 0 0 4941 644889.75 0.6556037493983712 -3 0.1022701263427734 3 Unmodified _YLGAKPRSL_ ENSG00000132819|ENST00000356208|RBM38;nc|ENSG00000132819|Q9H0Z9-2|RBM38 32.78568957990786 0.1150597335874693 2 Y{I|L}GAK 5 4 65.618 0.0 0.0 6.5383 0.0 0.0 0.0 468.25799857050896 468.25799857050896 52.42992819099939 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.3807196863200844 + Y{I|L}GAK 6.5383 + + 116 + 1 2.007 73956.5 1.0 1682 3260 4941 DOHH2_400M_050219_2,4944 DOHH2_400M_050219_2,4944,YLGAKPRSL True True YLGAKPRSL 25.533359 502.798052966595 5028911.5 4941.0 ENSG00000132819|ENST00000356208|RBM38;;nc|ENSG00000132819|Q9H0Z9-2|RBM38 4.95499849319458 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4946 25.545 494.0 194730.0 25 0 14743.0 + -1 SQDHGQELMYQ 11 108 676.2817614874314 1350.5489700416626 2 676.2801391482353 MULTI CID FTMS 0 0 0 4945 100064.609375 0.4470979250876828 -3 0.0755252838134765 1 Oxidation (M) _SQDHGQELM(Oxidation (M))YQ_ REV__ENSG00000169594|ENST00000345382|BNC1 18.373094154950223 0.6529654022026722 2 [HD]EAQQDA{M(Oxidation (M))|F}YQ 11 -1 + 87.599 0.0 0.0 6.4862 6.4862 87.639 0.0 0.0 0.0 7.367585652254178 66.80221902822632 7.367585652254178 9.128498242810991 0 0.9247425010840048 0.0 1.0629529932484498 0.0 [HD]EAQQDA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]DA{M(Oxidation (M))|F}YK;[HD]EA[AG]QDA{M(Oxidation (M))|F}YK;[HD]EA[AG][AG]DA{M(Oxidation (M))|F}YK;[HD]E[TP]EDA{M(Oxidation (M))|F}YK;[YE][C(Carbamidomethyl (C))K]QDA{M(Oxidation (M))|F}YQ;[HD]E[TP]EW{M(Oxidation (M))|F}YK;[YE]{[WT]|[RM]}EDA{M(Oxidation (M))|F}YK;[YE][C(Carbamidomethyl (C))K][AG]DA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]}[HD]DA{M(Oxidation (M))|F}YQ 6.4862;5.8103;5.8103;5.1366;5.0978;4.166;4.0934;3.9431;3.4875;3.3246 -;-;-;-;-;-;-;-;-;- 1028 1 2.007 73501.5 1.0 1683 3261 4945 DOHH2_400M_050219_2,4946 DOHH2_400M_050219_2,4946,SQDHGQELMYQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4947 25.552 397.0 229040.0 25 0 14568.0 + 8701 EVKPKVEAI 9 125 506.80559722333874 1011.5966415134776 2 506.8051635622978 MULTI CID FTMS 0 0 0 4945 109813.5 0.4932569068146667 -5 0.1703433990478515 2 Unmodified _EVKPKVEAI_ ENSG00000100592|ENST00000360909|DAAM1;nc|ENSG00000100592|Q9Y4D1|DAAM1 31.26834338654808 0.1333407332142048 2 NNKP 4 7 35.662 0.0 0.0 3.5253 0.0 0.0 0.0 555.3220919244749 555.3220919244749 16.211375162600703 0.0 0.0 0.0 0 0.6109243748081782 0.0 0.0 0.0 NNKP 3.5253 - 297 + 1 2.007 75347.6 1.0 1684 3261 4945 DOHH2_400M_050219_2,4947 DOHH2_400M_050219_2,4947,EVKPKVEAI False True EVKPKVEAI 25.551688 506.805163562298 1245295.5 4945.0 nc|ENSG00000100592|Q9Y4D1|DAAM1;;ENSG00000100592|ENST00000360909|DAAM1 3.8959733645121255 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4948 25.566 800.0 92814.0 25 0 7674.3 -1 0 49 1071.1308112859558 3210.370604458068 3 1071.466113269329 MULTI CID FTMS 0 0 0 4945 158085.3125 0.7786023303754152 -1 0.0113048553466796 3 2 E 1 -1 6.9897 0.0 0.0 0.21772 0.0 0.0 2402.460949772324 675.8281344049436 3078.289084177268 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21772 - 4 + 1 2.007 60086.3 0.5400000214576721 1685 3261 4945 DOHH2_400M_050219_2,4948 DOHH2_400M_050219_2,4948, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4950 25.571 169.0 305710.0 25 0 20286.0 + 29044 QEGKLDRTF 9 95 547.2857528177931 1092.556952702386 2 547.2863036990166 MULTI CID FTMS 0 0 0 4949 174246.125 0.953068535287737 -3 0.0756282806396484 1 Unmodified _QEGKLDRTF_ ENSG00000065518|ENST00000184266|NDUFB4;ENST00000485064.1_1_3:120321042-120321114:+|nuORF 17.11289562659939 0.3734572693229295 2 Y 1 9 13.979 0.0 0.0 1.2795 0.0 0.0 911.4827624941814 0.0 911.4827624941814 0.0 1.219778296232688 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2795 - 44 + 1 2.007 43474.5 1.0 1686 3262 4949 DOHH2_400M_050219_2,4950 DOHH2_400M_050219_2,4950,QEGKLDRTF False True QEGKLDRTF 25.571404 547.286303699017 936406.875 4949.0 ENST00000485064.1_1_3:120321042-120321114:+|nuORF;;ENSG00000065518|ENST00000184266|NDUFB4 4.903153896331787 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4951 25.585 800.0 104530.0 25 0 15260.0 + 37839 TLTSFGWLNP 10 129 568.2924378179605 1134.570322702721 2 568.2930175662041 MULTI CID FTMS 0 0 0 4949 26555.376953125 0.0228387967235112 11 -0.2465496063232422 2 Unmodified _TLTSFGWLNP_ REV__ENST00000318524.6_1_9:33294912-33295365:+|nuORF 10.823927491677226 0.6659270209832991 2 [{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}NTSMQN 10 -1 + 33.763 0.0 0.0 2.9759 2.9759 70.005 0.0 0.0 0.0 3.5422315162327536 0.9098171684869384 0.9098171684869384 3.5422315162327536 0 0.0629529932484498 1.5228787452803376 0.0 0.0 [{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}NTSMQN;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STN{[QV]|[N{I|L}]|[RA]|[KV]}VP;[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}GGTSMQN;[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}GSMQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MSTN{[QV]|[N{I|L}]|[RA]|[KV]}VP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STGG{[QV]|[N{I|L}]|[RA]|[KV]}VP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}SG{[SA]|[TG]}{[QV]|[N{I|L}]|[RA]|[KV]}VP;[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}NT[MD][{I|L}T];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}ST{[QG]|[NA]}[VG]VP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STK[{M(Oxidation (M))|F}V]Y 2.9759;2.6636;2.1681;2.1091;2.0476;1.8559;1.7969;1.7286;1.5906;1.5751 -;-;-;-;-;-;-;-;-;- 718 1 2.007 67945.2 0.5600000023841858 1687 3262 4949 DOHH2_400M_050219_2,4951 DOHH2_400M_050219_2,4951,TLTSFGWLNP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4952 25.59 253.0 282000.0 25 0 24721.0 40061 VGGQLWHL 8 91 455.248767311021 0 455.2484008669853 PEAK CID FTMS 0 0 0 4949 142125.953125 0.3397424682707463 -8 0.2760372161865234 3 Unmodified _VGGQLWHL_ ENST00000429989.7_1_10:82280023-82280299:+|nuORF 5.760428011301431 0.5786759180849727 2 E 1 8 0.9691 0.0 0.0 0.10667 0.0 0.0 570.3807916027077 206.03748499088127 776.418276593589 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.10667 - 6 + 1 2.007 61884.4 1.0 1688 3262 4949 DOHH2_400M_050219_2,4952 DOHH2_400M_050219_2,4952,VGGQLWHL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4955 25.61 800.0 162710.0 25 0 14526.0 6693 ECKECRKCFYQ 11 111 775.82971578166 1549.6448786301198 2 775.8298217654228 MULTI CID FTMS 0 0 0 4954 121776.7890625 0.3774284346422453 -3 0.0604782104492187 1 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 41.95555342248728 0.1822715950200113 2 [QA]HDEAGAQDA{M(Oxidation (M))|F}YQ 14 10 + 124.43 0.0 0.0 8.0294 8.0294 87.431 0.0 0.0 0.0 9.338979334745872 99.89101139579 9.338979334745872 5.391490684129636 0 1.6237125054200234 0.0 1.5994850021680094 2.254432191740108 [QA]HDEAGAQDA{M(Oxidation (M))|F}YQ;[QA]HDEAQQDA{M(Oxidation (M))|F}YQ;[QA]HDEAGA[AG]DA{M(Oxidation (M))|F}YQ;[QA]HDEQAQDA{M(Oxidation (M))|F}YK;[QA]HDEAGADAGA{M(Oxidation (M))|F}YK;[HD][QA]EAGAQDA{M(Oxidation (M))|F}YQ;[AG]AHDEAGAQDA{M(Oxidation (M))|F}YK;[YE][C(Carbamidomethyl (C))K]AGAQDA{M(Oxidation (M))|F}YK;[QA]HDEAGADQA{M(Oxidation (M))|F}YK;[AG]AHDEAQQDA{M(Oxidation (M))|F}YK 8.0294;7.6815;7.4454;7.3892;7.3647;7.317;7.221;7.1616;7.1273;7.0972 -;-;-;-;-;-;-;-;-;- 19778 1 2.007 92989.1 0.7099999785423279 1689 3264 4954 DOHH2_400M_050219_2,4955 DOHH2_400M_050219_2,4955,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4956 25.618 425.0 239350.0 25 0 25969.0 -1 VLFVEDGKME 10 102 591.7900694490023 1181.5655859648043 2 591.7896606326103 MULTI CID FTMS 0 0 0 4954 113865.8671875 0.2345018164729372 -12 0.3382492065429687 2 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 34.93206674587334 0.2110832994570416 2 EGK[{M(Oxidation (M))|F}E] 5 -1 35.758 0.0 0.0 3.0263 0.0 0.0 573.3362904279312 0.0 573.3362904279312 0.0 20.090251142578683 0.0 0.0 0 1.274227503252014 0.0 0.3807196863200844 0.0 EGK[{M(Oxidation (M))|F}E] 3.0263 - 168 1 2.007 79305.3 1.0 1690 3264 4954 DOHH2_400M_050219_2,4956 DOHH2_400M_050219_2,4956,VLFVEDGKME False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4958 25.63 546.0 165560.0 25 0 20634.0 + -1 MPPAPPPPPPQN 12 106 620.3132283273969 1238.6119037215938 2 620.3134033083916 MULTI CID FTMS 0 0 0 4957 130246.8359375 0.1739753570943472 56 -3.010496139526367 1 Oxidation (M) _ISPSRM(Oxidation (M))PQPPN_ ENST00000413725.5_1_11:64533292-64535069:-|nuORF;ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-7|SF1 17.44264345198275 0.6723198055858692 2 {[HG]|PP}AMPPPPPPQN 12 -1 {[HG]|PP}AM + + 72.098 6.1979 1.5644 5.8209 5.8209 58.808 0.0 0.0 0.0 0.0 48.46553324589158 0.0 0.0 0 2.6549471895720984 0.0 0.0 1.5986198691406326 {[HG]|PP}AMPPPPPPQN 5.8209 - 2303 + 1 2.007 73325.8 1.0 1691 3265 4957 DOHH2_400M_050219_2,4958 DOHH2_400M_050219_2,4958,ISPSRMPQPPN False False MPPAPPPPPPQN 25.62991 620.313403308392 248098560.0 4957.0 ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;ENSG00000168066|ENST00000377390|SF1;;nc|ENSG00000168066|Q15637-7|SF1 6.1981520652771 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4959 25.635 264.0 316890.0 25 0 26591.0 + 40441 VIKSRYQTL 9 121 554.3302486938788 1106.6459444545576 2 554.3299438357353 MULTI CID FTMS 0 0 0 4957 150589.875 0.7663932904270339 -2 0.0278224945068359 2 Unmodified _VIKSRYQTL_ ENSG00000182628|ENST00000330137|SKA2;ENST00000583976.1_1_17:57189640-57232487:-|nuORF 21.53697664764585 0.2571576504437394 2 V{I|L}K{[NV]|[RG]}D 6 5 55.283 0.0 0.0 4.9955 0.0 0.0 0.0 435.2197359674438 435.2197359674438 22.331860053953022 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7134679910804405 0.0 V{I|L}K{[NV]|[RG]}D 4.9955 - 287 + 1 2.007 72089.3 1.0 1692 3265 4957 DOHH2_400M_050219_2,4959 DOHH2_400M_050219_2,4959,VIKSRYQTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4960 25.649 800.0 225170.0 25 0 51945.0 + -1 DTTLLGAQRMW 11 134 654.3217972487864 1306.6290415643728 2 654.3202392458916 MULTI CID FTMS 0 0 0 4957 134563.765625 0.6807289517260056 -2 0.0278224945068359 3 Oxidation (M) _DTTLLGAQRM(Oxidation (M))W_ REV__ENSG00000135972|ENST00000258455|MRPS9;REV__ENST00000472220.1_1_2:105708813-105716216:+|nuORF 7.608950283845883 0.8392484121837455 2 YG[C(Carbamidomethyl (C))R] 4 -1 16.198 0.0 0.0 1.2397 0.0 0.0 752.3894358461193 0.0 752.3894358461193 0.0 5.740312677277187 0.0 0.0 0 0.0 0.0 0.0 0.0 YG[C(Carbamidomethyl (C))R] 1.2397 - 242 1 2.007 127786.8 0.6499999761581421 1693 3265 4957 DOHH2_400M_050219_2,4960 DOHH2_400M_050219_2,4960,DTTLLGAQRMW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4961 25.662 782.0 210140.0 25 0 16138.0 34437 SLWRGNGI 8 144 451.7455482429101 901.4765435526202 2 451.7453796267509 MULTI CID FTMS 0 0 0 4957 128246.2265625 0.7404276745150882 -1 0.0239906311035156 4 Unmodified _SLWRGNGI_ ENSG00000125648|ENST00000301454|SLC25A23;ENSG00000148339|ENST00000373069|SLC25A25;ENSG00000181240|ENST00000321510|SLC25A41;nc|ENSG00000125648|Q9BV35-2|SLC25A23;nc|ENSG00000125648|Q9BV35-3|SLC25A23;nc|ENSG00000125648|Q9BV35-4|SLC25A23;nc|ENSG00000148339|Q6KCM7-2|SLC25A25;nc|ENSG00000148339|Q6KCM7-4|SLC25A25;nc|ENSG00000148339|Q6KCM7-5|SLC25A25;nc|ENSG00000148339|Q6KCM7-6|SLC25A25;nc|ENSG00000148339|Q6KCM7|SLC25A25 28.486842064014134 0.4448922141344407 2 {[TV]|[{I|L}S]}CD 4 6 29.399 0.0 0.0 3.2612 0.0 0.0 0.0 480.2825106256469 480.2825106256469 10.394745784297127 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.3494850021680094 0.0 {[TV]|[{I|L}S]}CD 3.2612 - 256 + 1 2.007 130034.2 1.0 1694 3265 4957 DOHH2_400M_050219_2,4961 DOHH2_400M_050219_2,4961,SLWRGNGI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4963 25.667 41.0 1057500.0 25 0 127740.0 + 599 AEIVEGENHTY 11 61 631.2885858034865 1260.562618673773 2 631.2886230349541 MULTI CID FTMS 0 0 0 4962 1123851.25 0.4217184279790925 5 -0.1143665313720703 1 Unmodified _AEIVEGENHTY_ ENSG00000196924|ENST00000369850|FLNA;ENST00000474358.5_1_X:153580213-153581146:-|nuORF;ENST00000490936.5_1_X:153579531-153588003:-|nuORF;nc|ENSG00000196924|P21333-2|FLNA 71.70789743142352 0.0274550572689813 2 {[CP]|[EA]}{I|L}VEWN 7 5 61.088 0.0 0.0 4.8461 0.0 0.0 0.0 416.1581209772094 416.1581209772094 34.823733499007915 0.0 0.0 0.0 0 1.3807196863200843 0.0 0.805462187404089 0.75 {[CP]|[EA]}{I|L}VEWN 4.8461 - 370 + 1 2.007 41943.9 1.0 1695 3266 4962 DOHH2_400M_050219_2,4963 DOHH2_400M_050219_2,4963,AEIVEGENHTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4964 25.669 102.0 434530.0 25 0 27490.0 + 8170 EPQAKNISV 9 81 493.26965864010816 984.5247643470163 2 493.2693054080009 MULTI CID FTMS 0 0 0 4962 412796.15625 0.2595166418246428 6 -0.1458873748779297 2 Unmodified _EPQAKNISV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF 14.838274106304384 0.4350285940865338 2 {I|L}NKAQ 5 8 25.177 0.0 0.0 2.5573 0.0 0.0 222.12048075502256 205.06203638248283 427.18251713750544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 {I|L}NKAQ 2.5573 - 114 + 1 2.007 39266.2 1.0 1696 3266 4962 DOHH2_400M_050219_2,4964 DOHH2_400M_050219_2,4964,EPQAKNISV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4965 25.672 157.0 379980.0 25 0 26165.0 + 29010 QEDDRGITY 9 99 548.7488037276057 1095.4830545220111 2 548.7489501833916 MULTI CID FTMS 0 0 0 4962 267273.59375 0.624943827974991 -5 0.1288948059082031 3 Unmodified _QEDDRGITY_ ENSG00000162139|ENST00000294064|NEU3;nc|ENSG00000162139|Q9UQ49|NEU3 21.53697664764585 0.2571576504437394 2 TY 2 7 24.222 0.0 0.0 2.211 0.0 0.0 813.3616535099444 0.0 813.3616535099444 0.0 4.216590673155736 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + TY 2.211 + + 84 + 1 2.007 50368.6 1.0 1697 3266 4962 DOHH2_400M_050219_2,4965 DOHH2_400M_050219_2,4965,QEDDRGITY False True QEDDRGITY 25.672287 548.748950183392 0.0 4962.0 ENSG00000162139|ENST00000294064|NEU3;;nc|ENSG00000162139|Q9UQ49|NEU3 7.265506903330485 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4966 25.677 280.0 253120.0 25 0 20756.0 -1 VDTPIMTK 8 96 460.7413787653185 919.468204597437 2 460.7415038943291 MULTI CID FTMS 0 0 0 4962 161475.0 0.7621574489673328 9 -0.2128715515136718 4 Oxidation (M) _VDTPIM(Oxidation (M))TK_ ENSG00000143971|ENST00000272342|ETAA1 18.1463463914782 0.6428359029697936 2 [TA]P 3 -1 25.215 0.0 0.0 2.7424 0.0 0.0 0.0 647.3078706953463 647.3078706953463 7.246330807476294 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 [TA]P 2.7424 - 112 1 2.007 63352.4 1.0 1698 3266 4962 DOHH2_400M_050219_2,4966 DOHH2_400M_050219_2,4966,VDTPIMTK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4967 25.691 800.0 117580.0 25 0 5399.0 + 29181 QGDDTKRCLTN 11 126 625.7919032513346 1249.569253569469 2 625.7916747927666 MULTI CID FTMS 0 0 0 4962 154333.296875 1.0 0 0.0 5 Unmodified _QGDDTKRCLTN_ REV__ENSG00000115760|ENST00000421745|BIRC6 45.739877483867886 0.1412225664835785 2 {[QS]|[NT]}{I|L}[C(Carbamidomethyl (C))H]M{M(Oxidation (M))|F}{I|L}QS 10 -1 + 46.661 0.0 0.0 3.7341 3.7341 80.212 0.0 0.0 0.0 9.72689062979554 16.66895006820745 9.72689062979554 10.184465535402296 0 0.5484550065040282 0.0 0.5044321917401079 0.9476212463643424 {[QS]|[NT]}{I|L}[C(Carbamidomethyl (C))H]M{M(Oxidation (M))|F}{I|L}QS;[Q{I|L}]S[C(Carbamidomethyl (C))H]M{M(Oxidation (M))|F}{I|L}QS;{[TV]|[{I|L}S]}Q[C(Carbamidomethyl (C))H]M{M(Oxidation (M))|F}{I|L}QS;{[QG]|[NA]}[YG]Q{I|L}W[PS]QS;[{I|L}T]N[C(Carbamidomethyl (C))H]M{M(Oxidation (M))|F}{I|L}QS;{[QS]|[NT]}{I|L}[C(Carbamidomethyl (C))H]M{M(Oxidation (M))|F}[SG][{I|L}A];[TP][MN]QQG{M(Oxidation (M))|F}{I|L}QS;{[VA]|[{I|L}G]}AS[C(Carbamidomethyl (C))H]M{M(Oxidation (M))|F}{I|L}QS;[DP]V[WQ]M{M(Oxidation (M))|F}{I|L}QS;{[QG]|[NA]}DQ[VP][HA]D{[{M(Oxidation (M))|F}H]|[RQ]} 3.7341;2.9191;2.4555;2.232;2.2074;2.0412;1.8362;1.7381;1.6423;1.4153 -;-;-;-;-;-;-;-;-;- 930 1 2.007 74669.0 0.6800000071525574 1699 3266 4962 DOHH2_400M_050219_2,4967 DOHH2_400M_050219_2,4967,QGDDTKRCLTN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4968 25.697 333.0 219730.0 25 0 15991.0 + -1 EEQELEKSM 9 118 561.753644096472 1121.492735259744 2 561.7549316287041 MULTI CID FTMS 0 0 0 4962 121863.921875 0.4805161927730202 -5 0.1288948059082031 6 Oxidation (M) _QEEELTQM(Oxidation (M))V_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 26.268140514670165 0.1969607489560049 2 {[YC]|[HE]}Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EKSM 9 -1 + 26.946 0.0 0.0 2.4027 2.4027 69.645 0.0 0.0 0.0 7.147642715192507 3.979400086720375 3.979400086720375 3.979400086720375 0 0.3807196863200844 0.0 0.3807196863200844 0.0 {[YC]|[HE]}Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EKSM;{[YC]|[HE]}Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E[QA]{M(Oxidation (M))|F};[AG][HV]E{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[{M(Oxidation (M))|F}T];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HV]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[{M(Oxidation (M))|F}T];{[YC]|[HE]}[AG]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EKSM;[AG]E[HV]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[{M(Oxidation (M))|F}T];{[YC]|[HE]}Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EAAG{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[{M(Oxidation (M))|F}T];{[YC]|[HE]}Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD]G{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}[YQ]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[{M(Oxidation (M))|F}T] 2.4027;2.0479;1.6522;1.6429;1.5816;1.5111;1.4702;1.2487;1.1562;0.9729 -;-;-;-;-;-;-;-;-;- 241 + 1 2.007 62851.1 1.0 1700 3266 4962 DOHH2_400M_050219_2,4968 DOHH2_400M_050219_2,4968,QEEELTQMV False False EEQELEKSM 25.697312 561.754931628704 1486386.0 4962.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 5.0108489990234375 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 4970 25.715 800.0 155170.0 25 0 12020.0 + 45299 YSEGYPGQRY 10 141 610.2724609888342 1218.5303690444682 2 610.2686035037041 MULTI CID FTMS 0 0 0 4969 118399.5390625 0.0303930210427567 14 -0.5664920806884766 1 Unmodified _YSEGYPGQRY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000395682.3_1_17:18256945-18259295:-|nuORF;ENST00000419974.2_1_1:44317163-44317268:-|nuORF;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 61.60191391372663 0.0323840705564037 2 YSEGYP[RN]AY 10 3 + 88.754 0.0 0.0 7.2837 7.2837 84.121 0.0 0.0 0.0 39.825703356767264 15.026975159433531 15.026975159433531 3.4242268082220733 0 1.5356668758921828 1.6989700043360187 0.3807196863200844 0.3494850021680094 YSEGYP[RN]AY;YSEGYPG{[NV]|[RG]}AY;YSEYGP[RN]AY;YSWYPG{[NV]|[RG]}AY;YSEYGPG{[NV]|[RG]}AY;YSEGYPG[KS][MT];TDYGYP[RN]AY;TDYGYPG{[NV]|[RG]}AY;YSWYPG[KS][MT];YSEYGPG[KS][MT] 7.2837;7.0026;6.6053;6.463;6.3243;5.5183;5.3785;5.0975;4.9787;4.84 -;-;-;-;-;-;-;-;-;- 1074 + 1 2.019 93904.1 0.699999988079071 1701 3267 4969 DOHH2_400M_050219_2,4970 DOHH2_400M_050219_2,4970,YSEGYPGQRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4971 25.729 800.0 92553.0 25 0 7265.6 -1 0 55 963.0954291263622 2886.2644579792864 3 963.7643310427666 MULTI CID FTMS 0 0 0 4969 84413.4453125 0.2765740596259636 -4 0.1073856353759765 2 2 Y 1 -1 6.9897 0.0 0.0 0.24217 0.0 0.0 809.2590400213343 1910.9248562347875 2720.183896256122 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.24217 - 8 + 1 2.019 57051.0 0.4600000083446502 1702 3267 4969 DOHH2_400M_050219_2,4971 DOHH2_400M_050219_2,4971, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4972 25.736 415.0 237980.0 25 0 71459.0 -1 0 110 500.26725713104327 499.2599806644433 1 500.2682983279228 MULTI CID FTMS 0 0 0 4969 106946.734375 0.4815965983246473 -29 1.035928726196289 3 2 Y 1 -1 11.99 0.0 0.0 2.4015 0.0 0.0 318.1859735617073 0.0 318.1859735617073 0.0 1.712113404111033 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.4015 - 26 + 1 2.019 84694.6 1.0 1703 3267 4969 DOHH2_400M_050219_2,4972 DOHH2_400M_050219_2,4972, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4974 25.741 86.0 443770.0 25 0 33304.0 + 42365 VTDGPGNYKY 10 79 557.2639688518391 1112.513384770478 2 557.2643920779228 MULTI CID FTMS 0 0 0 4973 406135.0 0.4179733909691026 5 -0.075723648071289 1 Unmodified _VTDGPGNYKY_ ENSG00000088812|ENST00000262919|ATRN;nc|ENSG00000088812|O75882-2|ATRN;nc|ENSG00000088812|O75882-3|ATRN 36.506200033944 0.1944608063770638 2 VTDG[PG]NYKY 10 0 + 72.841 0.0 0.0 6.5474 6.5474 83.669 0.0 0.0 0.0 33.46787486224656 7.915152119416248 7.915152119416248 4.771212547196626 0 0.4247425010840047 2.0 0.0 0.0 + + VTDG[PG]NYKY;VTD[HT]SYKY;VTD[NP]NYKY;VTDG[PG]NYP{[HG]|PP};VTDG[PG]GGYKY;VTDG[{I|L}A][C(Carbamidomethyl (C))S]KY;VTD[HT]SYP{[HG]|PP};VTYYNYKY;VTD[NP]NYP{[HG]|PP};VTD[NP]GGYKY 6.5474;6.1186;5.9603;5.836;5.7237;5.4136;5.4032;5.378;5.2449;5.1326 +;-;-;-;-;-;-;-;-;- + 414 + 1 2.019 36269.9 1.0 1704 3268 4973 DOHH2_400M_050219_2,4974 DOHH2_400M_050219_2,4974,VTDGPGNYKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4975 25.743 84.0 668120.0 25 0 50228.0 + 5953 DQKDHAVF 8 92 480.23277922986 958.45100552652 2 480.2325622439384 MULTI CID FTMS 0 0 0 4973 725372.625 0.6876348790218418 -7 0.2030849456787109 2 Unmodified _DQKDHAVF_ ENSG00000086061|ENST00000330899|DNAJA1;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;ENST00000495015.5_1_9:33025323-33036160:+|nuORF;nc|ENSG00000086061|P31689-2|DNAJA1 39.957323273325 0.2350051964751539 2 A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DV{M(Oxidation (M))|F} 6 5 28.293 0.0 0.0 2.952 0.0 0.0 264.1477773489096 0.0 264.1477773489096 0.0 11.303629979011856 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DV{M(Oxidation (M))|F} 2.952 - 299 + 1 2.019 48970.4 1.0 1705 3268 4973 DOHH2_400M_050219_2,4975 DOHH2_400M_050219_2,4975,DQKDHAVF False True DQKDHAVF 25.743064 480.232562243938 6552540.0 4973.0 ENST00000495015.5_1_9:33025323-33036160:+|nuORF;;nc|ENSG00000086061|P31689-2|DNAJA1;;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;;ENSG00000086061|ENST00000330899|DNAJA1 6.737338701883952 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4977 25.748 91.0 971780.0 25 0 131440.0 + -1 PQMLLKLRK 9 86 381.5740887492665 1141.7004368479995 3 381.5739929080009 MULTI CID FTMS 0 0 0 4976 542463.125 0.0374572862964889 -7 0.1775150299072265 1 Oxidation (M) _PQM(Oxidation (M))LLKLRK_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 8.155526934196011 0.6299788542272896 2 {M(Oxidation (M))|F}[QP]K{I|L}K[R{I|L}]{I|L} 9 -1 + 24.402 0.0 0.0 2.1374 2.1374 72.637 0.0 0.0 0.0 10.59008836194643 0.501444527144276 0.501444527144276 7.034021960761269 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[QP]K{I|L}K[R{I|L}]{I|L};[PG]A{M(Oxidation (M))|F}K{I|L}K[R{I|L}]{I|L} 2.1374;1.5213 -;- 41 + 1 2.019 79560.5 1.0 1706 3269 4976 DOHH2_400M_050219_2,4977 DOHH2_400M_050219_2,4977,PQMLLKLRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4978 25.752 206.0 331560.0 25 0 46802.0 + 25902 NLKKMNQAL 9 104 530.3026664747279 1058.5907800162556 2 530.3026611208916 MULTI CID FTMS 0 0 0 4976 194058.59375 0.774875437202007 -2 0.0457420349121093 2 Unmodified _NLKKMNQAL_ ENSG00000137814|ENST00000260372|HAUS2;nc|ENSG00000137814|Q9NVX0-2|HAUS2;nc|ENSG00000137814|Q9NVX0-3|HAUS2 30.22481116460888 0.1466181017706357 2 {[QV]|[N{I|L}]|[RA]|[KV]}K{[CA]|SS}GNRA{I|L} 10 4 + 40.741 0.0 0.0 3.8486 3.8486 80.203 0.0 0.0 0.0 27.6419093765388 3.293578219013831 3.293578219013831 9.392653074926052 0 1.3182503180159344 2.0 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}K{[CA]|SS}GNRA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K[YV][Y{I|L}]{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}K[YV][KA][HS] 3.8486;2.9613;2.7299 -;-;- 105 + 1 2.019 56319.4 1.0 1707 3269 4976 DOHH2_400M_050219_2,4978 DOHH2_400M_050219_2,4978,NLKKMNQAL False True NLKKMNQAL 25.751801 530.302661120892 1121428.25 4976.0 ENSG00000137814|ENST00000260372|HAUS2;;nc|ENSG00000137814|Q9NVX0-2|HAUS2;;nc|ENSG00000137814|Q9NVX0-3|HAUS2 0.1612729330857595 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4979 25.756 249.0 206190.0 25 0 19007.0 + 39788 VEQPNQVNY 9 98 545.7624365995414 1089.510320265883 2 545.7615234255791 MULTI CID FTMS 0 0 0 4976 116217.265625 0.7838948753825199 1 -0.013397216796875 3 Unmodified _VEQPNQVNY_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 27.628801355627647 0.1796483985696185 2 [NP]QV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VNY 9 4 [NP]QV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V + + 25.573 9.8423 1.239 2.3472 2.3472 47.82 0.0 0.0 0.0 0.0 1.0353127608303936 0.0 0.0 0 0.5 0.0 0.0 0.5 [NP]QV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VNY 2.3472 - 153 + 1 2.019 46354.4 1.0 1708 3269 4976 DOHH2_400M_050219_2,4979 DOHH2_400M_050219_2,4979,VEQPNQVNY False True VEQPNQVNY 25.756443 545.761523425579 777775.875 4976.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 6.393370787302653 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4981 25.761 95.0 598890.0 25 0 95276.0 35680 SVELSGYFK 9 73 515.2674892101394 1028.520425487079 2 515.2678100466728 MULTI CID FTMS 0 0 0 4980 424082.5 0.4033091066051724 5 -0.1185951232910156 1 Unmodified _SVELSGYFK_ ENST00000478553.1_1_20:4761798-4761861:-|nuORF 18.1463463914782 0.3454829746528889 2 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K 9 6 + 73.449 0.0 0.0 7.1413 7.1413 95.079 0.0 0.0 0.0 61.47696807640069 18.758721274362514 18.758721274362514 24.247425010840047 0 0.8494850021680094 2.0 0.2742275032520141 0.6171302707394362 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}ATT{I|L}K;[VS]E[HD]TT{I|L}K;[VS][KA]E[QA]E[PA];{[{M(Oxidation (M))|F}C]|[YS]}Y[PG]TT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}YT[PG]T{I|L}K 7.1413;4.7838;4.6895;2.6914;2.6247;2.0393 -;-;-;-;-;- 97 + 1 2.019 48940.0 1.0 1709 3270 4980 DOHH2_400M_050219_2,4981 DOHH2_400M_050219_2,4981,SVELSGYFK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4982 25.767 296.0 281150.0 25 0 48421.0 + 24504 MIMEVADLQ 9 81 525.253382135984 1048.492211338768 2 525.2521850466728 MULTI CID FTMS 0 0 0 4980 148765.90625 0.2280160471647703 -6 0.1626930236816406 2 Unmodified _MIMEVADLQ_ REV__ENST00000297591.9_1_8:95508671-95511612:-|nuORF 14.838274106304384 0.4350285940865338 2 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q 8 -1 + 44.13 0.0 0.0 4.2089 4.2089 72.833 0.0 0.0 0.0 34.6657624451305 12.447274948966935 12.447274948966935 3.0102999566398125 0 0.9247425010840048 0.0 0.0 0.4247425010840047 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{[DA]|[EG]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}W{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}RQ;{[CA]|SS}W{[TV]|[{I|L}S]}[DN]{I|L}Q;{[CA]|SS}{I|L}{[DA]|[EG]}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}W{[WS]|[C(Carbamidomethyl (C)){I|L}]}RQ;{[CA]|SS}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[DN]{I|L}Q;{[CA]|SS}{I|L}{[SA]|[TG]}[WD]RQ;{[CA]|SS}{[SA]|[TG]}{I|L}[WD]RQ 4.2089;3.9218;3.3255;3.2769;3.2336;3.0384;2.9898;2.9464;2.7513;2.5833 -;-;-;-;-;-;-;-;-;- 187 + 1 2.019 69921.7 1.0 1710 3270 4980 DOHH2_400M_050219_2,4982 DOHH2_400M_050219_2,4982,MIMEVADLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4983 25.77 190.0 458690.0 25 0 37529.0 + 7272 EETHAPNSNW 10 123 592.7520861462372 1183.4896193592742 2 592.7517578005791 MULTI CID FTMS 0 0 0 4980 341603.59375 0.8686143961436571 -2 0.0200862884521484 3 Unmodified _EETHAPNSNW_ ENST00000518169.1_1_8:57124347-57125478:+|nuORF;nc|ENSG00000170791|Q9BUK0-4|CHCHD7 71.92227651296345 0.0188747003512554 2 {[CT]|[{M(Oxidation (M))|F}G]}[YE]A[NP]SNW 10 4 + 35.939 0.0 0.0 3.0367 3.0367 66.965 0.0 0.0 0.0 1.224311337860044 1.224311337860044 1.224311337860044 1.224311337860044 0 0.0 0.0 2.360924374808178 0.4247425010840047 {[CT]|[{M(Oxidation (M))|F}G]}[YE]A[NP]SNW;{[CT]|[{M(Oxidation (M))|F}G]}NS[NP]A{[ET]|[MV]}[{M(Oxidation (M))|F}T];{[CT]|[{M(Oxidation (M))|F}G]}[YE]A[NP]SD[KG];[NS][YN]A[QT]SNW;{[ET]|[MV]}[{M(Oxidation (M))|F}T]A[QT]SNW;{[CT]|[{M(Oxidation (M))|F}G]}{[{M(Oxidation (M))|F}D]|MM}T[NP]SNW;[HC][HT]A[QT]SNW;{[CT]|[{M(Oxidation (M))|F}G]}[YT][Y{M(Oxidation (M))|F}]SNW;[HA]QC(Carbamidomethyl (C))A[NP]SNW;{[ET]|[MV]}[{M(Oxidation (M))|F}T]{[WN]|[YH]}SNW 3.0367;2.9332;2.6919;2.2794;2.1571;2.1055;2.0667;2.0623;2.0106;2.0083 -;-;-;-;-;-;-;-;-;- 669 1 2.019 68554.8 1.0 1711 3270 4980 DOHH2_400M_050219_2,4983 DOHH2_400M_050219_2,4983,EETHAPNSNW True True EETHAPNSNW 25.770349 592.751757800579 2935845.25 4980.0 nc|ENSG00000170791|Q9BUK0-4|CHCHD7;;ENST00000518169.1_1_8:57124347-57125478:+|nuORF 8.238904476165771 2.0 True 10.0 False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_2 4984 25.777 343.0 332510.0 25 0 63029.0 -1 0 110 504.2631341260641 503.2558576594641 1 504.2566711306572 MULTI CID FTMS 0 0 0 -1 0 4 2 [W{I|L}]W 3 -1 [W{I|L}] + + 12.764 -0.16712 -0.055862 2.5363 2.5363 48.089 0.0 0.0 0.0 0.0 1.170416030166841 0.0 0.0 0 0.0 0.0 0.0 0.0 [W{I|L}]W 2.5363 - 72 + 1 2.019 89588.0 1.0 1712 3270 4980 DOHH2_400M_050219_2,4984 DOHH2_400M_050219_2,4984, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 4986 25.794 800.0 152200.0 25 0 7692.5 + 45221 YRAQPSASL 9 151 496.7602813504238 991.5060097676476 2 496.7606689333916 MULTI CID FTMS 0 0 0 4985 65832.9453125 0.7694057337439331 1 -0.0315208435058593 1 Unmodified _YRAQPSASL_ ENSG00000239306|ENST00000310137|RBM14 47.74868867922204 0.0453060283459952 2 [{M(Oxidation (M))|F}V]ARQM{I|L}Q 8 8 + 48.396 0.0 0.0 4.8811 4.8811 77.376 0.0 0.0 0.0 7.513487579716767 4.771212547196619 4.771212547196619 4.771212547196619 0 0.2742275032520141 2.0 0.0 0.3494850021680094 [{M(Oxidation (M))|F}V]ARQM{I|L}Q;[{M(Oxidation (M))|F}V]ARQMQ{I|L};{[TV]|[{I|L}S]}A[QP][YN]S{I|L};[{M(Oxidation (M))|F}V]A[VG]QM{I|L}Q;[{M(Oxidation (M))|F}V]AR[AG]M{I|L}Q;{[TV]|[{I|L}S]}A[NG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AS{I|L};[{M(Oxidation (M))|F}V]AR[AG]MQ{I|L};[{M(Oxidation (M))|F}V]A[VG]QMQ{I|L};[{M(Oxidation (M))|F}V]ARQM[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AS{I|L} 4.8811;4.3999;3.9545;3.9469;3.9469;3.6406;3.4657;3.4657;3.4657;3.4162 -;-;-;-;-;-;-;-;-;- 1889 + 1 2.033 96643.5 0.9700000286102296 1713 3271 4985 DOHH2_400M_050219_2,4986 DOHH2_400M_050219_2,4986,YRAQPSASL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4987 25.808 800.0 142260.0 25 0 19094.0 + 5117 DIEERPKEL 9 136 564.7983224775464 1127.5820920218928 2 564.7988159060478 MULTI CID FTMS 0 0 0 4985 113322.3828125 1.0 0 0.0 2 Unmodified _DIEERPKEL_ ENSG00000048162|ENST00000614830|NOP16;ENST00000510608.1_1_5:175813700-175815552:-|nuORF;nc|ENSG00000048162|Q9Y3C1-2|NOP16;nc|ENSG00000048162|Q9Y3C1-3|NOP16 69.33821966488729 0.021354776001734 2 {I|L}DEER[KP]E{I|L} 9 2 + 82.72 0.0 0.0 7.336 7.336 84.104 0.0 0.0 0.0 30.576539776773103 10.000540490703584 10.000540490703584 3.2390874094431865 0 2.1989700043360187 2.0 1.535666875892183 0.2396518287104437 {I|L}DEER[KP]E{I|L};D{I|L}EER[KP]E{I|L};{I|L}DEE[VG][KP]E{I|L};{I|L}D{I|L}{M(Oxidation (M))|F}E[H{I|L}]E{I|L};D{I|L}EE[VG][KP]E{I|L};D{I|L}{I|L}{M(Oxidation (M))|F}E[H{I|L}]E{I|L};{NN|[MP]|[D{I|L}]|[EV]}W[KP]EVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}W[KP]E{I|L}D{I|L};{I|L}DEER[{I|L}T]RP;{I|L}D{M(Oxidation (M))|F}{I|L}E[H{I|L}]E{I|L} 7.336;7.0488;6.5194;6.4657;6.2321;6.1784;6.1542;5.7939;5.7232;5.7113 -;+;-;-;-;-;-;-;-;- + 1794 + 1 2.033 88964.8 0.5699999928474426 1714 3271 4985 DOHH2_400M_050219_2,4987 DOHH2_400M_050219_2,4987,DIEERPKEL True True DIEERPKEL 25.808072 564.798815906048 402092.875 4985.0 ENSG00000048162|ENST00000614830|NOP16;;nc|ENSG00000048162|Q9Y3C1-2|NOP16;;ENST00000510608.1_1_5:175813700-175815552:-|nuORF;;nc|ENSG00000048162|Q9Y3C1-3|NOP16 4.6070934136708575 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4990 25.817 75.0 848080.0 25 0 68353.0 + 35482 STMSTNGIPR 10 81 532.2629720487133 1062.5113911642266 2 532.2625610232353 MULTI CID FTMS 0 0 0 4989 618671.75 0.6117339226497486 -1 0.0040264129638671 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 49.55428908609986 0.0827668555218455 2 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 10 2 + 60.437 0.0 0.0 5.6881 5.6881 84.117 0.0 0.0 0.0 7.269987279362624 8.239087409443187 7.269987279362624 8.239087409443187 0 0.5 0.0 0.7742275032520141 0.7059771852360797 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}RP;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}PR;{[DA]|[EG]}[YG]TN{[VA]|[{I|L}G]}RP;{[DA]|[EG]}[YG]TN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}M[{I|L}V][YN][HV] 5.6881;4.9127;4.8256;4.0501;3.1429;2.3674;2.1347;1.3592;0.85776 -;+;-;-;-;-;-;-;- + 172 + 1 2.033 54368.7 1.0 1715 3273 4989 DOHH2_400M_050219_2,4990 DOHH2_400M_050219_2,4990,STMSTNGIPR True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4991 25.82 181.0 478550.0 25 0 91359.0 + -1 MPKLGKARLI 10 96 571.8573887121555 1141.700224491111 2 571.8574706912041 MULTI CID FTMS 0 0 0 4989 240609.4375 0.1195391526603777 -3 0.0556373596191406 2 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 19.256988751693697 0.5244284437930726 2 {I|L}KQPE 5 -1 45.701 0.0 0.0 4.0029 0.0 0.0 528.3749867169937 0.0 528.3749867169937 0.0 32.2062251842808 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.5 {I|L}KQPE 4.0029 - 54 1 2.033 69733.7 1.0 1716 3273 4989 DOHH2_400M_050219_2,4991 DOHH2_400M_050219_2,4991,MPKLGKARLI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4992 25.827 340.0 418430.0 25 0 41846.0 + 26345 NSELGSETRY 10 139 578.2675344427133 1154.5205159522266 2 578.2667724490166 MULTI CID FTMS 0 0 0 4989 208759.03125 0.5454562601380664 -1 0.0040264129638671 3 Unmodified _NSELGSETRY_ ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1 114.4966697963812 0.0011126474287728 2 NSE{I|L}GSETRY 10 0 + 100.77 0.0 0.0 8.7279 8.7279 95.366 0.0 0.0 0.0 76.60855075809283 10.489838610346824 10.489838610346824 12.971736348700093 0 1.458170666312956 1.6989700043360187 1.2302046884880935 0.3807196863200844 + + NSE{I|L}GSETRY;NSE{I|L}GSAA{I|L}MY;NSE{I|L}GSEV{[SA]|[TG]}Y;NSE{I|L}G[QT]{I|L}MY;NSE{I|L}GSE[HS][VP];NSE{I|L}GSHH{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};NSE{I|L}G[WR]MY;NSE{I|L}GS[HT]D[VP];NSE{I|L}G[NP]ND[VP];NSE{I|L}G[WM]RY 8.7279;7.6043;7.5685;7.2955;7.1399;6.7403;6.6375;6.5344;6.4627;6.0321 +;-;-;-;-;-;-;-;-;- + 2059 + 1 2.033 106283.3 1.0 1717 3273 4989 DOHH2_400M_050219_2,4992 DOHH2_400M_050219_2,4992,NSELGSETRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4993 25.83 150.0 543360.0 25 0 140790.0 + 24105 LYKEKHSV 8 89 502.2833165197215 0 502.2832824587822 PEAK CID FTMS 0 0 0 4989 198691.671875 0.6974154269923499 17 -0.8770313262939453 4 Unmodified _LYKEKHSV_ REV__ENST00000223073.6_1_7:127950586-127950808:-|nuORF 10.183394434864962 0.5394990767616434 2 TD[QT]{M(Oxidation (M))|F}{I|L} 6 -1 13.901 0.0 0.0 1.3866 0.0 0.0 162.15129291434522 132.04561792545158 294.19691083979683 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TD[QT]{M(Oxidation (M))|F}{I|L} 1.3866 - 68 + 1 2.033 68856.2 1.0 1718 3273 4989 DOHH2_400M_050219_2,4993 DOHH2_400M_050219_2,4993,LYKEKHSV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 4995 25.836 186.0 227450.0 25 0 13590.0 -1 STMSTNGIPR 10 84 540.2623385491484 1078.5101241650966 2 540.2617675662041 MULTI CID FTMS 0 0 0 4994 167880.359375 1.0 0 0.0 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 22.65808497894818 0.4596126414678359 2 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 10 -1 + 39.808 0.0 0.0 3.691 3.691 68.046 0.0 0.0 0.0 7.269987279362624 0.6214790674884441 0.6214790674884441 0.6214790674884441 0 0.3494850021680094 0.0 0.0 0.3807196863200844 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STN[R{I|L}]GP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG[R{I|L}]GP;[HD][RD]N{[VA]|[{I|L}G]}RP;[HD][RD]N{[VA]|[{I|L}G]}PR;{[MG]|[TS]}H[DV]{[RE]|[WV]}[HV];[TA][R{I|L}]NTS[WM] 3.691;3.6334;2.8413;2.7836;2.1741;1.3244;1.3018;1.2442;1.1744;0.94594 -;+;-;-;-;-;-;-;-;- + 146 + 1 2.033 40334.1 1.0 1719 3274 4994 DOHH2_400M_050219_2,4995 DOHH2_400M_050219_2,4995,STMSTNGIPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 4996 25.85 800.0 140970.0 25 0 16921.0 16558 KCISKPSEFP 10 140 568.2935830093204 1134.5726130854407 2 568.2931396365166 MULTI CID FTMS 0 0 0 4994 101504.515625 1.0 0 0.0 2 Unmodified _KCISKPSEFP_ ENSG00000168676|ENST00000304372|KCTD19;ENST00000566392.5_1_16:67336668-67360655:-|nuORF;ENST00000570049.5_1_16:67335149-67360610:-|nuORF 13.90604991867851 0.6142120002215601 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR 10 9 + 49.076 0.0 0.0 4.3255 4.3255 71.803 0.0 0.0 0.0 1.3155999968328302 1.962946451439692 1.3155999968328302 1.962946451439692 0 0.0 0.0 0.3494850021680094 1.0387254899964358 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MSTN{[VA]|[{I|L}G]}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}ST[PA]VNR;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MSTN{[VA]|[{I|L}G]}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MST[PA]VNR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNN{I|L}VP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MSTGG{[VA]|[{I|L}G]}PR 4.3255;4.1525;3.905;3.8057;3.732;3.5178;3.3852;3.3674;3.3448;3.0972 -;-;-;-;-;-;-;-;-;- 1082 + 1 2.033 85608.4 0.5199999809265137 1720 3274 4994 DOHH2_400M_050219_2,4996 DOHH2_400M_050219_2,4996,KCISKPSEFP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4997 25.854 227.0 439910.0 25 0 72051.0 38375 TQTPSVYDE 9 110 520.2327483062844 1038.4509436793687 2 520.2329589724541 MULTI CID FTMS 0 0 0 4994 225314.3125 1.0 0 0.0 3 Unmodified _TQTPSVYDE_ ENSG00000127533|ENST00000248076|F2RL3 19.256988751693697 0.3154191944385105 2 [VS]D 3 6 20.942 0.0 0.0 2.0167 0.0 0.0 0.0 734.3007721307937 734.3007721307937 2.542618170783093 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]D 2.0167 - 298 1 2.033 79244.9 1.0 1721 3274 4994 DOHH2_400M_050219_2,4997 DOHH2_400M_050219_2,4997,TQTPSVYDE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4998 25.868 800.0 163810.0 25 0 16854.0 + 24686 MMDPNSTQRY 10 148 621.7655640672707 1241.5165752013413 2 621.7657348513603 MULTI CID FTMS 0 0 0 4994 164341.65625 1.0 0 0.0 4 Unmodified _MMDPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 57.24910588100465 0.0438022649904578 2 MMDPNSTQRY 10 0 + 94.269 0.0 0.0 7.5931 7.5931 85.997 0.0 0.0 0.0 74.40144982072263 7.887871618143976 7.887871618143976 4.563660331290436 0 0.9247425010840048 1.6989700043360187 0.3252574989159953 1.2302046884880935 + + MMDPNSTQRY;MMDPNSTQVGY;MMDPNST[AG]RY;MMDPGGSTQRY;MMDPNST[AG]VGY;MMDPGGSTQVGY;MMDPNST[YR]Q;MMDPGGST[AG]RY;MMDPNST[KT]{[MS]|[{M(Oxidation (M))|F}A]};MMDPN[C(Carbamidomethyl (C))R]RY 7.5931;7.2255;6.8549;6.8549;6.4902;6.4902;6.383;6.1196;5.9565;5.7796 +;-;-;-;-;-;-;-;-;- + 1150 + 1 2.033 96373.5 0.7300000190734863 1722 3274 4994 DOHH2_400M_050219_2,4998 DOHH2_400M_050219_2,4998,MMDPNSTQRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 4999 25.871 179.0 269820.0 25 0 28163.0 + 7180 EEPTVIKKY 9 91 553.8089241524708 1105.6032953717415 2 553.8080932497978 MULTI CID FTMS 0 0 0 4994 128369.6953125 1.0 0 0.0 5 Unmodified _EEPTVIKKY_ ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF 34.40172386719151 0.1061884637610825 2 EEPTV{I|L}KKY 9 0 + 61.481 0.0 0.0 5.5608 5.5608 90.202 0.0 0.0 0.0 48.70725687395429 13.46787486224656 13.46787486224656 29.67539084659649 0 0.2887254899964357 1.6989700043360187 0.0 0.0 + + EEPTV{I|L}KKY;EEPVV[{I|L}P]VPQ;[{I|L}P]VQ{I|L}VTP[HC];[NP][MN]V{I|L}KKY;EEPVV[{I|L}P]N[{I|L}P];[{I|L}P]V[AG]{I|L}VTP[HC];{[QD]|[EN]|[WG]|[KD]|[RS]}V[{I|L}P]VVP[HC];[NP][WR][{I|L}P]VPQ;[{I|L}P][WR]VVP[HC] 5.5608;2.8768;2.4269;2.3393;1.6123;1.598;0.89248;0.4881;0.16949 +;-;-;-;-;-;-;-;- + 227 + 1 2.033 42284.5 1.0 1723 3274 4994 DOHH2_400M_050219_2,4999 DOHH2_400M_050219_2,4999,EEPTVIKKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5000 25.875 204.0 203200.0 25 0 21296.0 + 25984 NLQRSCFR 8 76 512.2614676321202 0 512.2596923708916 PEAK CID FTMS 0 0 0 4994 112417.09375 1.0 0 0.0 6 Unmodified _NLQRSCFR_ REV__ENSG00000205726|ENST00000381318|ITSN1;REV__nc|ENSG00000205726|Q15811-4|ITSN1;REV__nc|ENSG00000205726|Q15811-8|ITSN1;REV__nc|ENSG00000205726|Q15811-9|ITSN1 15.847184025352805 0.4758297917908462 2 P 1 -1 8.8515 0.0 0.0 0.86567 0.0 0.0 511.212320802727 411.2231844537719 922.4355052564988 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P 0.86567 - 16 + 1 2.033 38199.6 1.0 1724 3274 4994 DOHH2_400M_050219_2,5000 DOHH2_400M_050219_2,5000,NLQRSCFR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5002 25.882 140.0 570360.0 25 0 59492.0 -1 VLFVEDGKME 10 106 591.7900694490023 1181.5655859648043 2 591.7895385622978 MULTI CID FTMS 0 0 0 5001 381356.0 0.785386147154999 -1 0.0454788208007812 1 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 23.78978130925829 0.4341852049148378 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KG[K{I|L}]G{[CP]|[EA]}W 10 -1 + 40.889 0.0 0.0 3.4606 3.4606 75.239 0.0 0.0 0.0 23.938937347570075 6.901552601841594 6.901552601841594 7.257724967479859 0 1.274227503252014 0.0 0.3252574989159953 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KG[K{I|L}]G{[CP]|[EA]}W;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KV[KA]G{[CP]|[EA]}W;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KGV[KA]{[CP]|[EA]}W;{[CT]|[{M(Oxidation (M))|F}G]}N[WR]VK[{M(Oxidation (M))|F}E];{[CT]|[{M(Oxidation (M))|F}G]}N[DV]QVK[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KV[KQ]{[CP]|[EA]}W;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KVG[KA]{[CP]|[EA]}W;V[YC(Carbamidomethyl (C))]V[{I|L}P]R[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KG[PS][WK]SV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KR[KA]{[CP]|[EA]}W 3.4606;2.8464;2.653;2.3994;2.3607;2.2935;2.0388;1.9534;1.865;1.7407 -;-;-;-;-;-;-;-;-;- 484 + 1 2.042 63117.1 1.0 1725 3275 5001 DOHH2_400M_050219_2,5002 DOHH2_400M_050219_2,5002,VLFVEDGKME False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5003 25.886 206.0 518690.0 25 0 137680.0 + 19956 APRHGLQSL 9 102 489.7793106886164 977.5440684440327 2 490.2833740115166 MULTI CID FTMS 0 0 0 5001 302990.625 0.7133517969833321 -2 0.062957763671875 2 Unmodified _LIEYLQSL_ nc|ENSG00000204469|P48634-3|PRRC2A;ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-4|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A 34.10243960390752 0.3329570729325616 2 [{M(Oxidation (M))|F}V]Q{I|L} 4 6 30.177 0.0 0.0 3.0871 0.0 0.0 0.0 487.25449548892817 487.25449548892817 -1.5608660557245455 0.0 -1.5608660557245455 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{M(Oxidation (M))|F}V]Q{I|L} 3.0871 - 430 + 1 2.042 88029.3 1.0 1726 3275 5001 DOHH2_400M_050219_2,5003 DOHH2_400M_050219_2,5003,LIEYLQSL False False APRHGLQSL 25.885663 490.283374011517 5677209.5 5001.0 nc|ENSG00000204469|P48634-3|PRRC2A;;ENSG00000204469|ENST00000376033|PRRC2A;;nc|ENSG00000204469|P48634-4|PRRC2A;;nc|ENSG00000204469|P48634-2|PRRC2A 7.300820986429851 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5004 25.888 93.0 1064000.0 25 0 73293.0 + 13780 HSHPRVVEL 9 140 358.5333394265506 1072.5781888798515 3 358.5328857302666 MULTI CID FTMS 0 0 0 5001 364101.3125 0.6563823363751299 -1 0.0454788208007812 3 Unmodified _HSHPRVVEL_ ENSG00000111052|ENST00000552864|LIN7A;ENSG00000148943|ENST00000278193|LIN7C 21.53697664764585 0.2571576504437394 2 VVE{I|L} 4 5 29.438 0.0 0.0 2.7446 0.0 0.0 614.3039167969174 0.0 614.3039167969174 0.0 16.406373691196094 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 + VVE{I|L} 2.7446 + + 176 1 2.042 83243.0 1.0 1727 3275 5001 DOHH2_400M_050219_2,5004 DOHH2_400M_050219_2,5004,HSHPRVVEL False True HSHPRVVEL 25.887692 358.532885730267 2481061.5 5001.0 ENSG00000148943|ENST00000278193|LIN7C;;ENSG00000111052|ENST00000552864|LIN7A 3.0903608004252114 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5005 25.893 278.0 509370.0 25 0 43814.0 + 13394 HLKPISREL 9 107 364.8892078861163 1091.645794258549 3 364.8886291384697 MULTI CID FTMS 0 0 0 5001 244125.375 0.0942027077086926 -2 0.062957763671875 4 Unmodified _HLKPISREL_ ENSG00000160201|ENST00000291552|U2AF1;ENST00000478282.1_1_21:44514579-44514991:-|nuORF;nc|ENSG00000160201|Q01081-2|U2AF1;nc|ENSG00000160201|Q01081-4|U2AF1 36.506200033944 0.094635877243972 2 {I|L}HKP{I|L}S{[RE]|[WV]}{I|L} 9 2 + 65.27 0.0 0.0 5.979 5.979 83.026 0.0 0.0 0.0 49.03266562845701 4.264771768807592 4.264771768807592 6.020599913279625 0 1.4802046884880935 1.6989700043360187 0.7614393726401688 0.0 {I|L}HKP{I|L}S{[RE]|[WV]}{I|L};{I|L}HK{I|L}PS{[RE]|[WV]}{I|L};{I|L}HKP{I|L}{I|L}[QP]{M(Oxidation (M))|F};{I|L}HKP{I|L}KK[DN];{I|L}HK{I|L}P{I|L}[QP]{M(Oxidation (M))|F};{I|L}HK{I|L}PKK[DN] 5.979;5.4275;4.8284;4.4845;4.2769;3.933 -;-;-;-;-;- 185 + 1 2.042 119636.9 1.0 1728 3275 5001 DOHH2_400M_050219_2,5005 DOHH2_400M_050219_2,5005,HLKPISREL True True HLKPISREL 25.892813 364.88862913847 29424143.0 5001.0 ENSG00000160201|ENST00000291552|U2AF1;;nc|ENSG00000160201|Q01081-2|U2AF1;;ENST00000478282.1_1_21:44514579-44514991:-|nuORF;;nc|ENSG00000160201|Q01081-4|U2AF1 1.6480687856674194 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5006 25.902 503.0 211970.0 25 0 12537.0 35394 STFINWLNHTN 11 130 673.8249145757361 0 673.8254882693291 PEAK CID FTMS 0 0 0 5001 133379.34375 0.9848597739649676 -1 0.0454788208007812 5 Unmodified _STFINWLNHTN_ ENSG00000187554|ENST00000642603|TLR5 34.93206674587334 0.1791564868266825 2 TSQSPD 6 10 56.552 0.0 0.0 4.2026 0.0 0.0 132.0597890129971 595.3084810846311 727.3682700976283 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 2.06295299324845 0.3494850021680094 TSQSPD 4.2026 - 359 + 1 2.042 76950.5 1.0 1729 3275 5001 DOHH2_400M_050219_2,5006 DOHH2_400M_050219_2,5006,STFINWLNHTN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5007 25.908 349.0 342140.0 25 0 36536.0 + 20099 LKARLVPA 8 119 434.2922666979475 866.5699804626951 2 434.2920715212822 MULTI CID FTMS 0 0 0 5001 116679.90625 0.7099767350543879 -1 0.0454788208007812 6 Unmodified _LKARLVPA_ ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B 20.453626601364224 0.6087503291685402 2 {I|L}PA 3 5 26.682 0.0 0.0 3.0791 0.0 0.0 567.3845082013687 0.0 567.3845082013687 0.0 6.109243748081781 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}PA 3.0791 - 137 1 2.042 95825.0 1.0 1730 3275 5001 DOHH2_400M_050219_2,5007 DOHH2_400M_050219_2,5007,LKARLVPA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5008 25.922 800.0 185630.0 25 0 20153.0 5408 DLLAWWPNPQ 10 141 620.3132283273969 1238.6119037215938 2 620.3134033083916 MULTI CID FTMS 0 0 0 5001 107047.4453125 0.1429871013006142 66 -3.84672737121582 7 Unmodified _DLLAWWPNPQ_ ENSG00000160161|ENST00000291495|CILP2 19.256988751693697 0.5244284437930726 2 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 6 {NN|[MP]|[D{I|L}]|[EV]}PA + + 68.618 18.486 4.666 5.5399 5.5399 57.609 0.0 0.0 0.0 0.0 52.9086391033682 0.0 0.0 0 2.6989700043360187 0.0 0.0 1.5233623702246373 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 5.5399 - 3362 + 1 2.042 113074.1 0.5899999737739563 1731 3275 5001 DOHH2_400M_050219_2,5008 DOHH2_400M_050219_2,5008,DLLAWWPNPQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5009 25.93 471.0 190750.0 25 0 17852.0 + 38794 TVELLYGWE 9 131 555.2778018718117 1108.5410508104233 2 555.2756835818291 MULTI CID FTMS 0 0 0 5001 97116.6484375 0.57263345966871 6 -0.3887577056884765 8 Unmodified _TVELLYGWE_ REV__ENSG00000177283|ENST00000374694|FZD8 23.1484247019978 0.2366544122328345 2 [KA]E{I|L}[WY]HY 8 -1 + 29.385 0.0 0.0 2.6508 2.6508 73.732 0.0 0.0 0.0 0.6694678963061307 13.18758762624412 0.6694678963061307 7.720092025109594 0 0.0 0.0 0.0 0.0 [KA]E{I|L}[WY]HY;[KA]EDQ{I|L}DKY;[KA]EDQ{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}[VP]NMDKY;{[QD]|[EN]|[WG]|[KD]|[RS]}[VP]N{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}VV[WY]HY;[KA]WW{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y;{[TV]|[{I|L}S]}E[EP]N[VP][QP];{[QD]|[EN]|[WG]|[KD]|[RS]}[VP]GGMDKY;{[TV]|[{I|L}S]}[HS]MN[VP][QP] 2.6508;1.9544;1.7081;1.6566;1.4103;0.95936;0.95936;0.95513;0.8259;0.79582 -;-;-;-;-;-;-;-;-;- 741 + 1 2.042 74946.4 1.0 1732 3275 5001 DOHH2_400M_050219_2,5009 DOHH2_400M_050219_2,5009,TVELLYGWE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5010 25.944 800.0 84688.0 25 0 16438.0 -1 0 57 1163.790717820989 3488.350324063167 3 1164.458300769329 MULTI CID FTMS 0 0 0 5001 98249.984375 0.4629378031771909 -1 0.0454788208007812 9 2 G 1 -1 6.9897 0.0 0.0 0.20037 0.0 0.0 2147.7538378377662 1280.5517084187677 3428.305546256534 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20037 - 17 + 1 2.042 59902.8 0.4000000059604645 1733 3275 5001 DOHH2_400M_050219_2,5010 DOHH2_400M_050219_2,5010, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5012 25.957 526.0 200590.0 25 0 20598.0 -1 ITAKGIVM 8 139 424.748695909802 847.482838886404 2 424.7487670779228 MULTI CID FTMS 0 0 0 5011 88205.484375 1.0 0 0.0 1 Oxidation (M) _ITAKGIVM(Oxidation (M))_ ENST00000425839.1_1_6:30437447-30438005:+|nuORF 18.13498045792455 0.6430038125133779 2 {[TV]|[{I|L}S]}AAK{I|L}V{M(Oxidation (M))|F} 8 -1 {[TV]|[{I|L}S]}AAK{I|L} + + 25.969 7.2975 1.2509 3.0643 3.0643 48.966 0.0 0.0 0.0 0.0 11.68189715722064 0.0 0.0 0 0.5 0.0 0.0 0.0 {[TV]|[{I|L}S]}AAK{I|L}V{M(Oxidation (M))|F} 3.0643 - 139 + 1 2.042 86571.1 1.0 1734 3276 5011 DOHH2_400M_050219_2,5012 DOHH2_400M_050219_2,5012,ITAKGIVM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5013 25.959 66.0 1073200.0 25 0 59696.0 + 5547 DMKRHRIQF 9 89 410.8891221333693 1229.645537000308 3 410.8887817263603 MULTI CID FTMS 0 0 0 5011 718221.4375 0.6426098715333084 -1 0.0688190460205078 2 Unmodified _DMKRHRIQF_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 28.486842064014134 0.1687311288560894 2 DMKR 4 5 53.418 0.0 0.0 4.3441 0.0 0.0 0.0 696.3596895807249 696.3596895807249 29.83410649039925 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.75 + DMKR 4.3441 + + 79 + 1 2.042 59173.3 1.0 1735 3276 5011 DOHH2_400M_050219_2,5013 DOHH2_400M_050219_2,5013,DMKRHRIQF False True DMKRHRIQF 25.958581 410.88878172636 12836596.0 5011.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 5.333073139190674 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5014 25.96 77.0 834830.0 25 0 133120.0 + 2094 APRHGLQSL 9 73 489.7793106886164 977.5440684440327 2 489.7775146365166 MULTI CID FTMS 0 0 0 5011 538232.125 1.0 0 0.0 3 Unmodified _APRHGLQSL_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A;nc|ENSG00000204469|P48634-4|PRRC2A 39.94969957227396 0.0757326808254658 2 HG{I|L}QS{I|L} 6 3 45.45 0.0 0.0 4.6494 0.0 0.0 324.191209861525 0.0 324.191209861525 0.0 30.30008452963798 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 + HG{I|L}QS{I|L} 4.6494 + + 104 1 2.042 57389.0 1.0 1736 3276 5011 DOHH2_400M_050219_2,5014 DOHH2_400M_050219_2,5014,APRHGLQSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5015 25.963 100.0 507710.0 25 0 78619.0 + 33002 SENMKASSF 9 74 500.72398139152114 999.4334098498424 2 500.7237426638603 MULTI CID FTMS 0 0 0 5011 282344.96875 1.0 0 0.0 4 Unmodified _SENMKASSF_ ENSG00000109534|ENST00000226796|GAR1;ENST00000503671.2_1_4:110737056-110740318:+|nuORF;ENST00000506840.5_1_4:110736915-110743667:+|nuORF;nc|ENSG00000109534|Q9NY12-2|GAR1 20.41453444215458 0.284085796332423 2 {[ES]|[DT]|[{I|L}C]}NMG[KT]S{M(Oxidation (M))|F} 9 3 + 30.06 0.0 0.0 3.0077 3.0077 73.588 0.0 0.0 0.0 7.079248469889453 6.989700043360188 6.989700043360188 6.709412807357751 0 0.9247425010840048 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}NMG[KT]S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}N[QP]A[HA]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NMG[KT]AY;{[ES]|[DT]|[{I|L}C]}GGMG[KT]S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGMG[KT]AY 3.0077;2.3363;2.3083;2.0863;1.387 -;-;-;-;- 108 + 1 2.042 43737.5 1.0 1737 3276 5011 DOHH2_400M_050219_2,5015 DOHH2_400M_050219_2,5015,SENMKASSF False True SENMKASSF 25.962508 500.72374266386 1358380.5 5011.0 ENST00000506840.5_1_4:110736915-110743667:+|nuORF;;ENSG00000109534|ENST00000226796|GAR1;;ENST00000503671.2_1_4:110737056-110740318:+|nuORF;;nc|ENSG00000109534|Q9NY12-2|GAR1 6.256648063659668 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5016 25.976 800.0 324910.0 25 0 42432.0 + + -1 STDVDKTGASYY 12 181 653.7936619583023 1305.5727709834046 2 653.7931396365166 MULTI CID FTMS 0 0 0 5011 213508.34375 0.3638668652944224 -1 0.0688190460205078 5 Oxidation (M) _TSYQRARDM(Oxidation (M))Y_ nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;ENSG00000144895|ENST00000460851|EIF2A 38.17557092003332 0.1768326257063233 2 {[MG]|[TS]}DVDKQTSYY 11 -1 + 90.924 0.0 0.0 6.9643 6.9643 86.258 0.0 0.0 0.0 8.749690573898661 54.83540248478204 8.749690573898661 6.025684359364433 0 3.004432191740108 0.0 3.030369551124698 0.0 {[MG]|[TS]}DVDKQTSYY;{[MG]|[TS]}DVDKTQSYY;{[MG]|[TS]}DVDKTGASYY;{[MG]|[TS]}DVDK[AG]TSYY;{[MG]|[TS]}DVRSQTSYY;{[MG]|[TS]}QKDVDTSYY;{[ES]|[DT]|[{I|L}C]}SVDKQTSYY;{[MG]|[TS]}DVRSTQSYY;{[MG]|[TS]}DVRSTGASYY;{[MG]|[TS]}DVRQSTSYY 6.9643;6.5027;6.4738;6.2651;6.1808;5.9438;5.8248;5.7192;5.6903;5.6204 -;-;-;-;-;-;-;-;-;- 35331 1 2.042 182536.4 0.8500000238418579 1738 3276 5011 DOHH2_400M_050219_2,5016 DOHH2_400M_050219_2,5016,TSYQRARDMY False False STDVDKTGASYY 25.976354 653.793139636517 3053387.25 5011.0 nc|ENSG00000144895|Q9BY44-2|EIF2A;;nc|ENSG00000144895|Q9BY44-4|EIF2A;;nc|ENSG00000144895|Q9BY44-3|EIF2A;;ENSG00000144895|ENST00000460851|EIF2A 7.754551887512207 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5017 25.981 233.0 441360.0 25 0 79371.0 + 5455 DLQTKSAL 8 116 438.2453985468155 874.4762441604311 2 438.2452575564384 MULTI CID FTMS 0 0 0 5011 210379.46875 0.376582934867975 -1 0.0688190460205078 6 Unmodified _DLQTKSAL_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 61.357469665136826 0.1155423183535659 2 {NN|[MP]|[D{I|L}]|[EV]}QTKSA{I|L} 8 0 + 60.263 0.0 0.0 6.8913 6.8913 91.105 0.0 0.0 0.0 35.604028237526755 10.97926902225013 10.97926902225013 9.262137858390815 0 0.7742275032520141 2.0 0.8252574989159953 0.4247425010840047 + + {NN|[MP]|[D{I|L}]|[EV]}QTKSA{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]TKSA{I|L};[KT]S[QA]{I|L}D{I|L};[KT]Q{[SA]|[TG]}{I|L}D{I|L};[KT]GA{[SA]|[TG]}{I|L}D{I|L};{[SA]|[TG]}KA{[SA]|[TG]}{I|L}D{I|L};[QT]K{[SA]|[TG]}{I|L}D{I|L};[KT]G[QT]{I|L}D{I|L};[KT]S[{I|L}A]QD{I|L};[KT]S[{I|L}A]EN{I|L} 6.8913;5.8321;2.8475;2.7162;2.6577;2.2267;2.0671;2.0482;1.9208;1.8756 +;-;-;-;-;-;-;-;-;- + 410 + 1 2.042 82588.5 1.0 1739 3276 5011 DOHH2_400M_050219_2,5017 DOHH2_400M_050219_2,5017,DLQTKSAL True True DLQTKSAL 25.980716 438.245257556438 2482422.25 5011.0 nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;nc|ENSG00000072571|O75330-4|HMMR;;ENSG00000072571|ENST00000393915|HMMR 4.052627007166545 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5018 25.987 372.0 404020.0 25 0 31562.0 + 32780 SEEDQVRKW 9 128 588.7857510373944 1175.5569491415888 2 588.7850219607353 MULTI CID FTMS 0 0 0 5011 197382.40625 0.5820460639552103 -1 0.0688190460205078 7 Unmodified _SEEDQVRKW_ nc|ENSG00000149100|Q7L2H7-2|EIF3M 117.7605887643192 0.0024069341015653 2 SEEDQVRKW 9 0 + 122.05 0.0 0.0 10.382 10.382 94.041 0.0 0.0 0.0 86.97698543561387 12.252684618815096 12.252684618815096 9.208187539523747 0 2.2658715643802765 2.0 0.8494850021680094 1.075257498915995 + + SEEDQVRKW;SEEDQV[VG]KW;SEED[AG]VRKW;SEED[AG]V[VG]KW;SEEG{[DA]|[EG]}VRKW;SEEG{[DA]|[EG]}V[VG]KW;SEW{[DA]|[EG]}V[VG]KW;{[CT]|[{M(Oxidation (M))|F}G]}KRVQD[HC]S;{[CT]|[{M(Oxidation (M))|F}G]}KRV[AG]D[HC]S;W[C(Carbamidomethyl (C))N]QVRKW 10.382;9.5989;9.5989;8.8193;8.7629;7.9833;6.7859;5.1875;4.4079;4.3864 +;-;-;-;-;-;-;-;-;- + 2354 + 1 2.042 112580.8 1.0 1740 3276 5011 DOHH2_400M_050219_2,5018 DOHH2_400M_050219_2,5018,SEEDQVRKW True True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 5019 25.993 286.0 507590.0 25 0 66309.0 + 13395 HLKPISREL 9 91 546.8299533530712 1091.6453537729424 2 546.8300048708916 MULTI CID FTMS 0 0 0 5011 183528.0 0.4009073650710867 -1 0.0688190460205078 8 Unmodified _HLKPISREL_ ENSG00000160201|ENST00000291552|U2AF1;ENST00000478282.1_1_21:44514579-44514991:-|nuORF;nc|ENSG00000160201|Q01081-2|U2AF1;nc|ENSG00000160201|Q01081-4|U2AF1 41.95555342248728 0.0647214845423414 2 H{I|L}K{I|L}E{[TV]|[{I|L}S]}[RP] 9 4 + 72.475 0.0 0.0 6.639 6.639 80.742 0.0 0.0 0.0 56.90134850261983 0.7872685050950423 0.7872685050950423 2.0903579934033303 0 1.2887254899964358 1.6989700043360187 0.7742275032520141 0.7742275032520141 H{I|L}K{I|L}E{[TV]|[{I|L}S]}[RP];{I|L}HK{I|L}E{[TV]|[{I|L}S]}[RP];H{I|L}K{I|L}[{I|L}T]D[RP];{I|L}HK{I|L}[{I|L}T]D[RP];H{I|L}{I|L}KE{[TV]|[{I|L}S]}[RP];{I|L}H{I|L}KE{[TV]|[{I|L}S]}[RP];H{I|L}{I|L}K[{I|L}T]D[RP];{I|L}H{I|L}K[{I|L}T]D[RP];H{I|L}{I|L}{[TV]|[{I|L}S]}G{[TV]|[{I|L}S]}[RP];{I|L}H{I|L}{[TV]|[{I|L}S]}G{[TV]|[{I|L}S]}[RP] 6.639;6.4475;6.2499;6.0584;5.5851;5.3936;5.196;5.0045;4.569;4.3775 -;-;-;-;-;-;-;-;-;- 442 + 1 2.042 111866.8 1.0 1741 3276 5011 DOHH2_400M_050219_2,5019 DOHH2_400M_050219_2,5019,HLKPISREL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5020 26.002 511.0 224330.0 25 0 14344.0 + 7021 EEKYRPAAL 9 127 538.790374340077 1075.566195746954 2 538.7894164919853 MULTI CID FTMS 0 0 0 5011 144842.453125 1.0 0 0.0 9 Unmodified _EEKYRPAAL_ ENSG00000115464|ENST00000398571|USP34;ENST00000463046.5_1_2:61439047-61463244:-|nuORF;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34 61.357469665136826 0.0253304979873734 2 EEKYR[PA]A{I|L} 9 0 + 65.753 0.0 0.0 6.1133 6.1133 87.769 0.0 0.0 0.0 43.80983077361762 13.61818737241734 13.61818737241734 9.208187539523747 0 0.9604093769761876 2.0 0.0 0.3807196863200844 + + EEKYR[PA]A{I|L};EEKY[VG][PA]A{I|L};EEK[RV]R{M(Oxidation (M))|F}{I|L};EEKYRVV[PG];EEK[RV][MT]A{I|L};EEK[RV]RPY;EEKY[VG]VV[PG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}HHR[PA]A{I|L};[TA]VVR[EC]W{I|L};[TA]VV[WM]AW{I|L} 6.1133;5.2572;4.2303;3.9641;3.4853;3.3808;3.1079;1.7498;1.5458;1.266 +;-;-;-;-;-;-;-;-;- + 611 + 1 2.042 92087.1 1.0 1742 3276 5011 DOHH2_400M_050219_2,5020 DOHH2_400M_050219_2,5020,EEKYRPAAL True True EEKYRPAAL 26.001696 538.789416491985 668269.5625 5011.0 nc|ENSG00000115464|Q70CQ2-3|USP34;;ENSG00000115464|ENST00000398571|USP34;;ENST00000463046.5_1_2:61439047-61463244:-|nuORF;;nc|ENSG00000115464|Q70CQ2-2|USP34 6.051414648691813 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5021 26.011 511.0 218840.0 25 0 26057.0 + 25576 NEYPTPRSY 9 123 563.7609295308226 1125.5073061284452 2 563.7619506716728 MULTI CID FTMS 0 0 0 5011 102575.890625 0.4440301500671978 -3 0.1317768096923828 10 Unmodified _NEYPTPRSY_ ENSG00000237651|ENST00000432605|C2orf74 36.506200033944 0.094635877243972 2 {[QD]|[EN]|[WG]|[KD]|[RS]}YPT 5 4 33.456 0.0 0.0 2.9725 0.0 0.0 0.0 518.236576847651 518.236576847651 22.0356292685378 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 + {[QD]|[EN]|[WG]|[KD]|[RS]}YPT 2.9725 + + 215 + 1 2.042 89730.8 1.0 1743 3276 5011 DOHH2_400M_050219_2,5021 DOHH2_400M_050219_2,5021,NEYPTPRSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5022 26.026 800.0 194630.0 25 0 22329.0 + 31755 RSDPNSESLY 10 163 584.2671409830982 0 584.2660400271416 PEAK CID FTMS 0 0 0 5011 92992.390625 0.9729038332883104 -1 0.0688190460205078 11 Unmodified _RSDPNSESLY_ ENSG00000138593|ENST00000559471|SECISBP2L 33.4449034751529 0.1805881786150987 2 {I|L}SEQTG 6 8 37.44 0.0 0.0 3.2096 0.0 0.0 181.0715194712737 367.1328829401001 548.2044024113737 0.0 0.0 0.0 0.0 0 1.3182503180159344 0.0 0.9247425010840048 0.3494850021680094 {I|L}SEQTG 3.2096 - 594 + 1 2.042 119571.1 0.550000011920929 1744 3276 5011 DOHH2_400M_050219_2,5022 DOHH2_400M_050219_2,5022,RSDPNSESLY False True RSDPNSESLY 26.025719 584.266040027142 890158.875 5011.0 ENSG00000138593|ENST00000559471|SECISBP2L 6.966680844624837 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5023 26.027 69.0 806260.0 25 0 167790.0 -1 0 70 472.2744805413768 471.2672040747768 1 472.2743713259697 MULTI CID FTMS 0 0 0 5011 841568.0 0.2505591908678777 -12 0.350107192993164 12 2 [{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]} 4 -1 + 15.686 0.0 0.0 3.3285 3.3285 80.473 0.0 0.0 0.0 4.71726222832956 7.501225267833998 4.71726222832956 15.686362358410122 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.3285 - 13 1 2.042 48918.7 1.0 1745 3276 5011 DOHH2_400M_050219_2,5023 DOHH2_400M_050219_2,5023, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5024 26.029 59.0 888980.0 25 0 53382.0 -1 YTVGKCFKEAN 11 85 658.8212535597597 1315.6279541863194 2 658.8198730349541 MULTI CID FTMS 0 0 0 5011 489503.46875 0.7990715959811636 -1 0.0688190460205078 13 Carbamidomethyl (C) _YTVGKC(Carbamidomethyl (C))FKEAN_ ENST00000461513.1_1_17:49579856-49580498:-|nuORF 31.26834338654808 0.3580123756476716 2 [YT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{[VA]|[{I|L}G]}SQSAN 12 -1 + 71.824 0.0 0.0 5.4593 5.4593 80.216 0.0 0.0 0.0 10.391362274856917 41.13335251583166 10.391362274856917 5.255762612236907 0 1.1549471895720984 2.0 1.274227503252014 0.3252574989159953 [YT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{[VA]|[{I|L}G]}SQSAN;[YT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RSA[TA]SAN;[YT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RS{[QD]|[EN]|[WG]|[KD]|[RS]}SAN;[DP]Y[HK]{[VA]|[{I|L}G]}SQSAN;[YT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RSA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AN;[YT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RS[KS]DAN;[{M(Oxidation (M))|F}V]E[HK]{[VA]|[{I|L}G]}SQSAN;[{M(Oxidation (M))|F}V][RH]T{[VA]|[{I|L}G]}SQSAN;[{M(Oxidation (M))|F}V][RH]RSA[TA]SAN;[YG][YR]T{[VA]|[{I|L}G]}SQSAN 5.4593;5.0598;4.7861;4.3764;4.2679;4.134;3.884;3.7501;3.3506;3.2909 -;-;-;-;-;-;-;-;-;- 1373 1 2.042 42566.9 1.0 1746 3276 5011 DOHH2_400M_050219_2,5024 DOHH2_400M_050219_2,5024,YTVGKCFKEAN False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5026 26.033 4.5 13737000.0 25 0 1746400.0 + 6381 DWAKLIKRL 9 72 381.5740887492665 1141.7004368479995 3 381.5741760134697 MULTI CID FTMS 0 0 0 5025 10526968.0 0.726891167413412 1 -0.0715236663818359 1 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 2.282774691075616 0.8349936567342158 2 K{I|L}K[QP]E 6 -1 28.416 0.0 0.0 2.489 0.0 0.0 400.2801686017594 0.0 400.2801686017594 0.0 20.96910013008056 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.489 - 28 1 2.042 55449.1 1.0 1747 3277 5025 DOHH2_400M_050219_2,5026 DOHH2_400M_050219_2,5026,DWAKLIKRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5027 26.036 147.0 307240.0 25 0 16222.0 25449 NEHVSQVF 8 82 480.23277922986 958.45100552652 2 480.2325012087822 MULTI CID FTMS 0 0 0 5025 252442.25 0.2393088601031112 2 -0.1378726959228515 2 Unmodified _NEHVSQVF_ ENST00000414932.1_1_7:43908445-43909104:-|nuORF 36.04419817259434 0.3004715606373109 2 {[VA]|[{I|L}G]}[HD][NS]AV{M(Oxidation (M))|F} 9 5 {[VA]|[{I|L}G]}[HD][NS]A + + 24.464 -7.4853 -1.0781 2.5524 2.5524 48.106 0.0 0.0 0.0 0.0 8.979400086720375 0.0 0.0 0 0.5 0.0 0.0 0.0 {[VA]|[{I|L}G]}[HD][NS]AV{M(Oxidation (M))|F} 2.5524 - 94 + 1 2.042 41634.8 1.0 1748 3277 5025 DOHH2_400M_050219_2,5027 DOHH2_400M_050219_2,5027,NEHVSQVF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5028 26.038 54.0 873530.0 25 0 69387.0 -1 SGECKCEDTWS 11 74 434.49719595529086 1300.4697584660726 3 434.4971496462822 MULTI CID FTMS 0 0 0 5025 924784.125 0.6699197049636882 -1 0.0847682952880859 3 Carbamidomethyl (C) _SGEC(Carbamidomethyl (C))KCEDTWS_ ENSG00000008277|ENST00000413139|ADAM22;nc|ENSG00000008277|Q9P0K1-2|ADAM22;nc|ENSG00000008277|Q9P0K1-3|ADAM22;nc|ENSG00000008277|Q9P0K1-4|ADAM22;nc|ENSG00000008277|Q9P0K1-5|ADAM22;nc|ENSG00000008277|Q9P0K1|ADAM22 2.843284757254958 0.8617331327080043 2 TT{I|L}HY 5 -1 21.938 0.0 0.0 1.6869 0.0 0.0 667.1562538155648 0.0 667.1562538155648 0.0 17.78151250383644 0.0 0.0 0 0.0 0.0 0.0 0.0 TT{I|L}HY 1.6869 - 41 + 1 2.042 46031.2 1.0 1749 3277 5025 DOHH2_400M_050219_2,5028 DOHH2_400M_050219_2,5028,SGECKCEDTWS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5029 26.04 86.0 876540.0 25 0 52476.0 + 32781 SEEDQVRKW 9 98 392.8594809767344 1175.5566135304032 3 392.8592712283134 MULTI CID FTMS 0 0 0 5025 662279.5 1.0 0 0.0 4 Unmodified _SEEDQVRKW_ nc|ENSG00000149100|Q7L2H7-2|EIF3M 41.8396318013385 0.0653578398400075 2 {[ES]|[DT]|[{I|L}C]}EDQVRKW 9 0 {[ES]|[DT]|[{I|L}C]} + + 44.646 6.1202 2.8324 3.7978 3.7978 51.086 0.0 0.0 0.0 0.0 12.70766971142507 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.5 + + {[ES]|[DT]|[{I|L}C]}EDQVRKW 3.7978 + + 228 + 1 2.042 65651.5 1.0 1750 3277 5025 DOHH2_400M_050219_2,5029 DOHH2_400M_050219_2,5029,SEEDQVRKW True True SEEDQVRKW 26.039654 392.859271228313 5017805.625 5025.0 nc|ENSG00000149100|Q7L2H7-2|EIF3M 7.4396688143412275 3.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 5030 26.042 102.0 419990.0 25 0 44485.0 -1 GSCWWECNML 10 80 651.2425442624285 1300.470535591657 2 651.2426635622978 MULTI CID FTMS 0 0 0 5025 602453.8125 0.670449781791511 -1 0.0847682952880859 5 Carbamidomethyl (C),Oxidation (M) _GSC(Carbamidomethyl (C))WWECNM(Oxidation (M))L_ L1MB5_dup414|chr1:156191205-156192060:-|1.6995444750627933|0.2947540995242821|2.53|48.0|26|3|sense 10.073929032068715 0.6785112666868882 2 DCTT{I|L}HY 7 -1 34.914 0.0 0.0 2.6847 0.0 0.0 449.12216020278817 0.0 449.12216020278817 0.0 12.367064098430646 0.0 0.0 0 0.0 0.0 0.0 0.0 DCTT{I|L}HY 2.6847 - 127 + 1 2.042 36102.4 1.0 1751 3277 5025 DOHH2_400M_050219_2,5030 DOHH2_400M_050219_2,5030,GSCWWECNML False False False False ERV PXD020620_cell_line DOHH2_400M_050219_2 5031 26.044 86.0 893810.0 25 0 222340.0 + 32622 SAYERSMM 8 84 487.70759760849137 973.4006422837828 2 487.7070800662041 MULTI CID FTMS 0 0 0 5025 510076.5 0.5389654880700117 -1 0.0847682952880859 6 Unmodified _SAYERSMM_ ENSG00000159140|ENST00000356577|SON;ENSG00000159140|ENST00000356577|SON;ENSG00000159140|ENST00000356577|SON;ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-9|SON;nc|ENSG00000159140|P18583-9|SON 31.26834338654808 0.3863233259196171 2 {[SA]|[TG]}YERC[{M(Oxidation (M))|F}V] 8 2 + 43.179 0.0 0.0 4.4359 4.4359 75.252 0.0 0.0 0.0 15.744171855527966 2.174617874626037 2.174617874626037 4.2478773067036 0 0.6989700043360187 2.0 0.3252574989159953 0.2302046884880938 {[SA]|[TG]}YERC[{M(Oxidation (M))|F}V];{[SA]|[TG]}Y{[CT]|[{M(Oxidation (M))|F}G]}{I|L}WM;[YT]CRE[TA]M 4.4359;3.9995;2.0399 -;-;- 52 + 1 2.042 64655.4 1.0 1752 3277 5025 DOHH2_400M_050219_2,5031 DOHH2_400M_050219_2,5031,SAYERSMM False True SAYERSMM 26.043779 487.707080066204 4323482.0 5025.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;SON|p.M1049L|1|0.36|ENSG00000159140|chr21:33552376-33552376|A/C|missense_variant;;nc|ENSG00000159140|P18583-9|SON 5.786019166310628 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5032 26.046 109.0 623270.0 25 0 34990.0 + 26598 NVPWTRTI 8 101 493.7726763532853 985.5307997733704 2 493.7722350955009 MULTI CID FTMS 0 0 0 5025 485905.3125 0.0211795836668532 -4 0.2165451049804687 7 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 32.30548876998284 0.3644845974844379 2 GGVR{[NV]|[RG]}GNT{I|L} 10 -1 + 59.159 0.0 0.0 6.0028 6.0028 81.237 0.0 0.0 0.0 4.126632654927441 8.936692389496407 4.126632654927441 4.126632654927441 0 1.274227503252014 1.2218487496163564 0.0 0.9436726795685342 GGVR{[NV]|[RG]}GNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GNT{I|L};GGVR{[NV]|[RG]}GGGT{I|L};GGVR[NG]VNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GGGT{I|L};{[NV]|[RG]}R[NG]VNT{I|L};GGVR[NG]VGGT{I|L};[VP]S[W{I|L}]GNT{I|L};{[NV]|[RG]}R[NG]VGGT{I|L};[VP]T[WR]NT{I|L} 6.0028;5.584;5.0728;4.8523;4.6497;4.4336;3.9224;3.8322;3.4992;3.3365 -;-;-;-;-;-;-;-;-;- 537 1 2.042 57591.0 1.0 1753 3277 5025 DOHH2_400M_050219_2,5032 DOHH2_400M_050219_2,5032,NVPWTRTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5033 26.048 109.0 739470.0 25 0 141430.0 + 23982 LVTVTVSA 8 91 395.2396569355037 788.4647609378075 2 395.2393676638603 MULTI CID FTMS 0 0 0 5025 469274.34375 0.2005942898673293 -2 0.1535873413085937 8 Unmodified _LVTVTVSA_ REV__ENSG00000008300|ENST00000164024|CELSR3;REV__nc|ENSG00000008300|Q9NYQ7-2|CELSR3 24.67388899826682 0.525179942228231 2 {I|L}VTD{I|L}TK 7 -1 + 83.99 0.0 0.0 10.652 10.652 90.623 0.0 0.0 0.0 69.28070988419236 16.804782212094338 16.804782212094338 6.53212513775344 0 0.3807196863200844 2.0 0.6747425010840047 0.1989700043360188 {I|L}VTD{I|L}TK;{I|L}VTVETK 10.652;9.8239 -;- 108 + 1 2.042 69392.1 1.0 1754 3277 5025 DOHH2_400M_050219_2,5033 DOHH2_400M_050219_2,5033,LVTVTVSA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5034 26.051 101.0 470940.0 25 0 54270.0 + 27603 PLEDMGFIQ 9 71 525.253382135984 1048.492211338768 2 525.2537719607353 MULTI CID FTMS 0 0 0 5025 429811.375 0.6587792406498031 1 -0.0715236663818359 9 Unmodified _PLEDMGFIQ_ REV__ENSG00000089639|ENST00000203556|GMIP;REV__nc|ENSG00000089639|Q9P107-2|GMIP 19.256988751693697 0.3154191944385105 2 ADG{M(Oxidation (M))|F}{I|L}Q 6 -1 40.099 0.0 0.0 3.8244 0.0 0.0 399.186815330275 0.0 399.186815330275 0.0 29.641237821364967 0.0 0.0 0 1.0 0.0 0.0 0.0 ADG{M(Oxidation (M))|F}{I|L}Q 3.8244 - 76 1 2.042 45408.2 1.0 1755 3277 5025 DOHH2_400M_050219_2,5034 DOHH2_400M_050219_2,5034,PLEDMGFIQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5035 26.053 145.0 410500.0 25 0 70885.0 + -1 TEMSLPSW 8 80 504.7226630740554 1007.4307732149108 2 504.7226745486259 MULTI CID FTMS 0 0 0 5025 247966.25 1.0 0 0.0 10 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))TEM(Oxidation (M))SLPSW_ REV__ENST00000358869.4_1_4:38879919-38879958:+|nuORF 19.438996006549623 0.6237395211498085 2 SW 2 -1 34.464 0.0 0.0 3.421 0.0 0.0 716.3091908185562 0.0 716.3091908185562 0.0 20.48455006504028 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 SW 3.421 + + 75 1 2.042 51696.7 1.0 1756 3277 5025 DOHH2_400M_050219_2,5035 DOHH2_400M_050219_2,5035,TEMSLPSW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5036 26.056 143.0 335220.0 25 0 18374.0 + 6181 DTDSQRLAY 9 77 534.7515868064243 1067.4886206796484 2 534.7517578005791 MULTI CID FTMS 0 0 0 5025 230564.3125 0.7939831230948268 -1 0.0847682952880859 11 Unmodified _DTDSQRLAY_ ENSG00000101412|ENST00000343380|E2F1 55.50274090549119 0.0285720310785888 2 {[ES]|[DT]|[{I|L}C]}DSQR{I|L}AY 9 0 + 49.077 0.0 0.0 4.5974 4.5974 81.828 0.0 0.0 0.0 38.79940090660894 16.478174818886373 16.478174818886373 9.208187539523747 0 1.798455006504028 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}DSQR{I|L}AY;{[ES]|[DT]|[{I|L}C]}DS[AG]R{I|L}AY;{[ES]|[DT]|[{I|L}C]}DS[KT][PA]AY 4.5974;3.7348;3.7187 +;-;- + 58 + 1 2.042 44037.9 1.0 1757 3277 5025 DOHH2_400M_050219_2,5036 DOHH2_400M_050219_2,5036,DTDSQRLAY True True DTDSQRLAY 26.056335 534.751757800579 3355455.0 5025.0 ENSG00000101412|ENST00000343380|E2F1 8.535224437713623 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5037 26.064 424.0 361780.0 25 0 32113.0 + 32825 SEGDDKIEY 9 130 528.2300692779675 1054.4455856227348 2 528.2299072146416 MULTI CID FTMS 0 0 0 5025 224476.34375 0.7079922156016177 -1 0.0847682952880859 12 Unmodified _SEGDDKIEY_ ENSG00000105202|ENST00000221801|FBL;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 33.4449034751529 0.1114409586740657 2 {[ES]|[DT]|[{I|L}C]}GAA{I|L}ESEY 10 5 + 70.741 0.0 0.0 6.7088 6.7088 79.317 0.0 0.0 0.0 5.30726239543597 58.870339003045245 5.30726239543597 0.796896906561031 0 1.947621246364342 0.0 1.841129063296272 0.0 {[ES]|[DT]|[{I|L}C]}GAA{I|L}ESEY;{[ES]|[DT]|[{I|L}C]}[QA]{I|L}ESEY;{[QD]|[EN]|[WG]|[KD]|[RS]}[DG]{I|L}ESEY;{[ES]|[DT]|[{I|L}C]}GAA{I|L}TDEY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DGESEY;{[ES]|[DT]|[{I|L}C]}[QA]{I|L}TDEY;[DN]VS{I|L}ESEY;{[ES]|[DT]|[{I|L}C]}G[RV]ESEY;{[QD]|[EN]|[WG]|[KD]|[RS]}[DG]{I|L}C{I|L}EY;{[QD]|[EN]|[WG]|[KD]|[RS]}[DG]{I|L}TDEY 6.7088;6.6332;5.9708;5.8577;5.794;5.7822;5.3571;5.2837;5.2571;5.1197 -;-;-;-;-;-;-;-;-;- 1405 1 2.042 122040.3 1.0 1758 3277 5025 DOHH2_400M_050219_2,5037 DOHH2_400M_050219_2,5037,SEGDDKIEY True True SEGDDKIEY 26.063906 528.229907214642 1359809.625 5025.0 ENSG00000105202|ENST00000221801|FBL;;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 6.112862269083659 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5038 26.07 341.0 294690.0 25 0 15572.0 + 705 AENRQGTLTEY 11 110 641.307623786732 1280.600694640264 2 641.3076049685478 MULTI CID FTMS 0 0 0 5025 178338.1875 0.4394717887968393 -1 0.0847682952880859 13 Unmodified _AENRQGTLTEY_ ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74191697-74197664:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1 60.899326713953855 0.0654953153043458 2 DAD{I|L}TEY 7 7 60.226 0.0 0.0 4.703 0.0 0.0 455.2662921020912 0.0 455.2662921020912 0.0 44.741691672186334 0.0 0.0 0 0.805462187404089 0.0 1.274227503252014 0.0 DAD{I|L}TEY 4.703 - 1459 1 2.042 79057.6 1.0 1759 3277 5025 DOHH2_400M_050219_2,5038 DOHH2_400M_050219_2,5038,AENRQGTLTEY True True AENRQGTLTEY 26.070093 641.307604968548 2104631.25 5025.0 ENSG00000158517|ENST00000289473|NCF1;;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;;nc|ENSG00000158517|P14598-2|NCF1;;ENST00000398421.6_1_7:74191697-74197664:+|nuORF 7.334807554880778 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5039 26.084 800.0 219650.0 25 0 53323.0 + 5549 DMKRHRIQF 9 102 615.8299271668134 1229.645301400427 2 615.8293334841728 MULTI CID FTMS 0 0 0 5025 154495.34375 1.0 0 0.0 14 Unmodified _DMKRHRIQF_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 20.453626601364224 0.2830276176381075 2 D{M(Oxidation (M))|F} 2 7 20.969 0.0 0.0 1.7053 0.0 0.0 0.0 964.5285388034174 964.5285388034174 8.494850021680094 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D{M(Oxidation (M))|F} 1.7053 + + 37 + 1 2.042 130019.2 0.7400000095367432 1760 3277 5025 DOHH2_400M_050219_2,5039 DOHH2_400M_050219_2,5039,DMKRHRIQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5040 26.089 293.0 879550.0 25 0 87501.0 + 7843 ELKTKIEKL 9 158 367.901042300696 1100.681297502288 3 367.9001953005791 MULTI CID FTMS 0 0 0 5025 145765.078125 0.1095033770221636 -3 0.199066162109375 15 Unmodified _ELKTKIEKL_ ENSG00000040275|ENST00000265295|SPDL1;ENST00000507232.5_1_5:169018105-169028825:+|nuORF;ENST00000510751.5_1_5:169015420-169022772:+|nuORF;nc|ENSG00000040275|Q96EA4-2|SPDL1 57.24910588100465 0.0276051374632116 2 {[QN]|[E{I|L}]|[KN]}KK[VP]K{M(Oxidation (M))|F}{I|L} 9 4 + 57.648 0.0 0.0 5.2375 5.2375 75.929 0.0 0.0 0.0 2.117668984063976 7.786640487086544 2.117668984063976 2.341284356197235 0 1.1989700043360187 1.3979400086720375 1.5771412119639845 0.0 {[QN]|[E{I|L}]|[KN]}KK[VP]K{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}KKTK{[QN]|[E{I|L}]|[KN]}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VP]K{I|L}K{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}P]K{I|L}K{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}K[VP]K{M(Oxidation (M))|F}{I|L};[K{I|L}]EKTK{[QN]|[E{I|L}]|[KN]}{I|L};[{I|L}T]KK[VP]R{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KTK{[QN]|[E{I|L}]|[KN]}{I|L};[{I|L}T]KR[VP]K{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}KK{[QN]|[E{I|L}]|[KN]}[KT]{I|L} 5.2375;5.0248;4.787;3.9524;3.3782;3.3275;3.2309;3.1655;3.1447;3.1 -;-;-;-;-;-;-;-;-;- 1845 1 2.042 203348.7 1.0 1761 3277 5025 DOHH2_400M_050219_2,5040 DOHH2_400M_050219_2,5040,ELKTKIEKL True True ELKTKIEKL 26.089291 367.900195300579 6093564.5 5025.0 ENSG00000040275|ENST00000265295|SPDL1;;ENST00000510751.5_1_5:169015420-169022772:+|nuORF;;ENST00000507232.5_1_5:169018105-169028825:+|nuORF;;nc|ENSG00000040275|Q96EA4-2|SPDL1 -0.4303318237264951 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5041 26.1 633.0 251030.0 25 0 16913.0 -1 EESTRCVLQ 9 141 561.2656274460874 1120.5167019589746 2 561.2660400271416 MULTI CID FTMS 0 0 0 5025 110924.46875 1.0 0 0.0 16 Carbamidomethyl (C) _EESTRC(Carbamidomethyl (C))VLQ_ ENSG00000072840|ENST00000264956|EVC;ENST00000506240.1_1_4:5795319-5799100:+|nuORF 46.020951573049366 0.0490941689151868 2 DG{M(Oxidation (M))|F}{I|L}Q 5 -1 54.68 0.0 0.0 4.8799 0.0 0.0 542.24022896972 0.0 542.24022896972 0.0 40.86819398339564 0.0 0.0 0 1.0 0.0 1.6237125054200234 0.0 DG{M(Oxidation (M))|F}{I|L}Q 4.8799 - 156 1 2.042 120983.6 1.0 1762 3277 5025 DOHH2_400M_050219_2,5041 DOHH2_400M_050219_2,5041,EESTRCVLQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5043 26.106 77.0 947780.0 25 0 88802.0 + -1 MPKLGKARLI 10 82 571.8573887121555 1141.700224491111 2 571.8575927615166 MULTI CID FTMS 0 0 0 5042 608710.75 0.3024185918320973 2 -0.0772457122802734 1 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 18.1463463914782 0.5430639438673815 2 K{I|L}KQPE 6 -1 48.493 0.0 0.0 4.2474 0.0 0.0 400.2804127423844 0.0 400.2804127423844 0.0 28.315468932362577 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.5 K{I|L}KQPE 4.2474 - 90 1 2.04 61992.3 1.0 1763 3278 5042 DOHH2_400M_050219_2,5043 DOHH2_400M_050219_2,5043,MPKLGKARLI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5044 26.111 299.0 347000.0 25 0 41724.0 + 2669 ATDPTIHTV 9 92 477.7483522119504 0 477.7482177615166 PEAK CID FTMS 0 0 0 5042 80910.125 0.7648442542682558 1 -0.0663490295410156 2 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 16.942295170755138 0.2326366549411506 2 A 1 8 6.9897 0.0 0.0 0.73307 0.0 0.0 231.9858055675668 647.4366156450624 879.4224212126292 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.73307 + + 25 + 1 2.04 86343.5 1.0 1764 3278 5042 DOHH2_400M_050219_2,5044 DOHH2_400M_050219_2,5044,ATDPTIHTV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5045 26.113 45.0 1164100.0 25 0 113660.0 + 45458 YTETEPYHNY 10 83 658.7756771253677 1315.5368013175353 2 658.7754394412041 MULTI CID FTMS 0 0 0 5042 1020928.8125 0.8562077186511565 -2 0.1562919616699218 3 Unmodified _YTETEPYHNY_ ENSG00000158545|ENST00000301011|ZC3H18;ENST00000568072.1_1_16:88666261-88675531:+|nuORF 49.55428908609986 0.0827668555218455 2 YTE{[ET]|[MV]}PYWNN 10 2 + 89.02 0.0 0.0 6.7669 6.7669 83.747 0.0 0.0 0.0 36.53212513775344 8.865928420337056 8.865928420337056 4.151051905782495 0 0.7059771852360797 2.0 0.4247425010840047 0.6109243748081782 YTE{[ET]|[MV]}PYWNN;YTE{[ET]|[MV]}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}ENN;YTE{[ET]|[MV]}P[YG]ENN;YTE{[ET]|[MV]}PYTT[DP];YTE{[ET]|[MV]}PYWGGN;YTE{[ET]|[MV]}PYTE[PS];YT[QA]C(Carbamidomethyl (C))PYWNN;YT[QA]C(Carbamidomethyl (C))PYTT[DP];YT[QA]C(Carbamidomethyl (C))PYTE[PS];YT[{M(Oxidation (M))|F}T]Q{[QD]|[EN]|[WG]|[KD]|[RS]}WNN 6.7669;6.4513;6.3175;6.0929;6.0702;5.8919;5.6654;5.3143;5.1133;5.0337 -;-;-;-;-;-;-;-;-;- 2047 + 1 2.04 44685.1 1.0 1765 3278 5042 DOHH2_400M_050219_2,5045 DOHH2_400M_050219_2,5045,YTETEPYHNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5046 26.115 92.0 667840.0 25 0 67477.0 + 12355 GTDGHVHLY 9 92 499.7380996828516 997.4616464325032 2 499.7373840212822 MULTI CID FTMS 0 0 0 5042 391666.6875 0.1058555610855699 -3 0.2251110076904297 4 Unmodified _GTDGHVHLY_ ENSG00000119333|ENST00000372715|DYNC2I2 70.71552829651908 0.0208223590022201 2 {[SA]|[TG]}D[RH]H{I|L} 7 3 42.465 0.0 0.0 4.2573 0.0 0.0 0.0 178.0513094537719 178.0513094537719 27.86339432885626 0.0 0.0 0.0 0 1.25 1.6989700043360187 0.0 0.0 {[SA]|[TG]}D[RH]H{I|L} 4.2573 - 186 + 1 2.04 53803.4 1.0 1766 3278 5042 DOHH2_400M_050219_2,5046 DOHH2_400M_050219_2,5046,GTDGHVHLY True True GTDGHVHLY 26.114535 499.737384021282 49914519.0 5042.0 ENSG00000119333|ENST00000372715|DYNC2I2 9.72700564066569 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5047 26.122 393.0 420370.0 25 0 31549.0 + 7582 EIKTKIKEL 9 139 551.3478336084578 1100.6811142837155 2 551.3474609255791 MULTI CID FTMS 0 0 0 5042 274991.25 0.6533702093353387 -1 0.0715236663818359 5 Unmodified _EIKTKIKEL_ ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1 115.05908914016896 0.0034448879819573 2 {I|L}EKTK{I|L}KE{I|L} 9 2 + 109.78 0.0 0.0 9.9735 9.9735 87.491 0.0 0.0 0.0 59.6555126198383 22.84826562528984 22.84826562528984 3.807196863200844 0 2.5253187046026264 1.6989700043360187 1.960409376976188 0.3807196863200844 {I|L}EKTK{I|L}KE{I|L};E{I|L}KTK{I|L}KE{I|L};{[QN]|[E{I|L}]|[KN]}KTK{I|L}KE{I|L};{[QN]|[E{I|L}]|[KN]}KKT{I|L}KE{I|L};{[QN]|[E{I|L}]|[KN]}KTKK{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}KKTK{I|L}E{I|L};[{I|L}T]KKE{I|L}KE{I|L};[{I|L}T]KEK{I|L}KE{I|L};{[QN]|[E{I|L}]|[KN]}KK[VP]K{M(Oxidation (M))|F}{I|L};[KT]{I|L}KE{I|L}KE{I|L} 9.9735;9.6276;8.4821;7.953;7.7776;7.2485;6.3299;5.9616;5.7924;5.6535 -;+;+;-;-;-;-;-;-;- + 2072 + 1 2.04 128395.0 1.0 1767 3278 5042 DOHH2_400M_050219_2,5047 DOHH2_400M_050219_2,5047,EIKTKIKEL True True EIKTKIKEL 26.121606 551.347460925579 2079248.875 5042.0 nc|ENSG00000120694|Q92598-4|HSPH1;;nc|ENSG00000120694|Q92598-2|HSPH1;;ENSG00000120694|ENST00000320027|HSPH1;;nc|ENSG00000120694|Q92598-3|HSPH1 5.276241938273112 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5048 26.126 247.0 385220.0 25 0 33011.0 + 857 AEVAEHVQY 9 131 523.2504798138397 1044.4864066944792 2 523.2510864138603 MULTI CID FTMS 0 0 0 5042 242992.484375 0.4490248882744634 -1 0.0715236663818359 6 Unmodified _AEVAEHVQY_ ENSG00000112312|ENST00000230056|GMNN 53.832793166522166 0.0319663582346103 2 {[CP]|[EA]}HVVQC{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 6 + 49.429 0.0 0.0 4.7323 4.7323 73.289 0.0 0.0 0.0 1.850906723735612 3.894323136107204 1.850906723735612 1.850906723735612 0 0.805462187404089 0.0 0.25 0.0 {[CP]|[EA]}HVVQC{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YC]|[HE]}AVVQC{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[CP]|[EA]}VHVQC{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[CP]|[EA]}VAEHVQY;{[YC]|[HE]}VAVQC{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[CP]|[EA]}HVQVC{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}AHVQC{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[CP]|[EA]}VEAHVQY;{[YC]|[HE]}AVQVC{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[CP]|[EA]}HVV[AG]C{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.7323;4.5551;4.5149;4.3595;4.1354;4.0631;3.9591;3.9474;3.8859;3.8507 -;-;-;+;-;-;-;-;-;- + 1056 1 2.04 79015.9 1.0 1768 3278 5042 DOHH2_400M_050219_2,5048 DOHH2_400M_050219_2,5048,AEVAEHVQY True True AEVAEHVQY 26.126224 523.25108641386 2787368.25 5042.0 ENSG00000112312|ENST00000230056|GMNN 5.976932048797607 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5049 26.13 184.0 425090.0 25 0 53186.0 + 26102 NPKVQASL 8 97 428.74811826964265 855.4816836060853 2 428.7479125857353 MULTI CID FTMS 0 0 0 5042 213854.4375 1.0 0 0.0 7 Unmodified _NPKVQASL_ ENSG00000134717|ENST00000313334|BTF3L4;ENSG00000145741|ENST00000380591|BTF3;ENST00000418879.1_1_6:137865036-137865375:-|nuORF;nc|ENSG00000134717|Q96K17-2|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3 23.1484247019978 0.5573009939494978 2 S{I|L} 2 6 22.435 0.0 0.0 2.6225 0.0 0.0 637.3545301410447 0.0 637.3545301410447 0.0 21.17595277211517 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 + S{I|L} 2.6225 + + 30 + 1 2.04 64221.3 1.0 1769 3278 5042 DOHH2_400M_050219_2,5049 DOHH2_400M_050219_2,5049,NPKVQASL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5050 26.136 367.0 305660.0 25 0 30431.0 + 25906 NLKPVKTL 8 109 456.7978807152879 911.5812084973758 2 456.7973205447197 MULTI CID FTMS 0 0 0 5042 210372.859375 1.0 0 0.0 8 Unmodified _NLKPVKTL_ ENSG00000174231|ENST00000304992|PRPF8;ENST00000573716.1_1_17:1581802-1582496:-|nuORF 62.57269311338072 0.1158273023829763 2 {I|L}NK[VP]KT{I|L} 8 2 + 80.901 0.0 0.0 8.8748 8.8748 97.828 0.0 0.0 0.0 60.5575137918186 12.5190243216651 12.5190243216651 28.737125054200234 0 1.8098943791441968 2.0 1.1989700043360187 0.0 {I|L}NK[VP]KT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K[VP]KT{I|L};{I|L}GGK[VP]KT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KVV{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[VP]K{[QV]|[N{I|L}]|[RA]|[KV]}KT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VV{I|L}{[QN]|[E{I|L}]|[KN]}{I|L};[KA][VG][VP]KT{I|L};[VP]KG{[VA]|[{I|L}G]}KT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VVK{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[K{I|L}]N[VP]KT{I|L} 8.8748;5.7223;5.6647;3.5291;3.2044;3.124;2.8706;2.8181;2.6874;2.3194 -;+;-;-;-;-;-;-;-;- + 337 + 1 2.04 90693.3 1.0 1770 3278 5042 DOHH2_400M_050219_2,5050 DOHH2_400M_050219_2,5050,NLKPVKTL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5051 26.144 412.0 281080.0 25 0 22406.0 + 7146 EENKIDRTF 9 126 576.2871836653129 1150.5598143974255 2 576.2867309451103 MULTI CID FTMS 0 0 0 5042 181498.90625 1.0 0 0.0 9 Unmodified _EENKIDRTF_ ENSG00000121211|ENST00000240488|MND1 28.49450938151212 0.1686335738423394 2 D{I|L}KN[HC] 6 8 30.393 0.0 0.0 2.6415 0.0 0.0 422.22801406074376 0.0 422.22801406074376 0.0 6.353612200315119 0.0 0.0 0 0.25 0.0 0.0 0.4247425010840047 D{I|L}KN[HC] 2.6415 - 268 1 2.04 92249.1 1.0 1771 3278 5042 DOHH2_400M_050219_2,5051 DOHH2_400M_050219_2,5051,EENKIDRTF False True EENKIDRTF 26.143743 576.28673094511 1612064.0 5042.0 ENSG00000121211|ENST00000240488|MND1 5.852135976155599 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5052 26.152 468.0 329950.0 25 0 36080.0 31411 RPIKAAIGE 9 119 477.7903426653919 953.5661323975838 2 477.7902709841728 MULTI CID FTMS 0 0 0 5042 147254.75 0.7373544927843068 -1 0.0715236663818359 10 Unmodified _RPIKAAIGE_ ENSG00000151849|ENST00000381884|CENPJ;nc|ENSG00000151849|Q9HC77-2|CENPJ 13.90604991867851 0.4602628045680013 2 AA{I|L}W 4 6 22.431 0.0 0.0 2.3523 0.0 0.0 494.3324890440997 0.0 494.3324890440997 0.0 2.669072919819179 0.0 0.0 0 0.25 0.0 0.0 0.0 AA{I|L}W 2.3523 - 267 1 2.04 122510.1 1.0 1772 3278 5042 DOHH2_400M_050219_2,5052 DOHH2_400M_050219_2,5052,RPIKAAIGE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5053 26.158 300.0 648510.0 25 0 69599.0 + 30531 RELEKDMHYY 10 115 461.88362579522266 1382.629047985868 3 461.8837768435478 MULTI CID FTMS 0 0 0 5042 149212.640625 0.1712386140487257 -3 0.2251110076904297 11 Unmodified _RELEKDMHYY_ ENSG00000083750|ENST00000374941|RRAGB;ENSG00000155876|ENST00000380527|RRAGA;ENST00000474757.1_1_X:55757854-55777647:+|nuORF;ENST00000498762.1_1_X:55748624-55758085:+|nuORF;nc|ENSG00000083750|Q5VZM2|RRAGB 50.64776852458333 0.0763490153687073 2 {[RE]|[WV]}{I|L}EKDMHYY 10 0 + 85.5 0.0 0.0 6.1839 6.1839 85.424 0.0 0.0 0.0 7.690775249321078 14.146518864155126 7.690775249321078 7.690775249321078 0 2.385151878060192 0.0 0.7302046884880937 0.2742275032520141 + + {[RE]|[WV]}{I|L}EKDMHYY;{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}KDMHYY;{[RE]|[WV]}{I|L}EKDHMYY;{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}KDHMYY;{[RE]|[WV]}{I|L}WWMHYY;{[RE]|[WV]}{I|L}WWHMYY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[TV]|[{I|L}S]}T[EP]MHYY;{[WN]|[YH]}MDK{[QV]|[N{I|L}]|[RA]|[KV]}HYY;[HM]DYK{[QV]|[N{I|L}]|[RA]|[KV]}HYY;[HM]DKY{[QV]|[N{I|L}]|[RA]|[KV]}HYY 6.1839;5.6276;5.586;5.0298;4.2081;3.6103;2.9885;2.9813;2.8623;2.7922 +;-;-;-;-;-;-;-;-;- + 676 1 2.04 151573.9 1.0 1773 3278 5042 DOHH2_400M_050219_2,5053 DOHH2_400M_050219_2,5053,RELEKDMHYY True True RELEKDMHYY 26.157509 461.883776843548 4830844.625 5042.0 ENST00000498762.1_1_X:55748624-55758085:+|nuORF;;ENSG00000155876|ENST00000380527|RRAGA;;nc|ENSG00000083750|Q5VZM2|RRAGB;;ENSG00000083750|ENST00000374941|RRAGB;;ENST00000474757.1_1_X:55757854-55777647:+|nuORF 9.218645731608072 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5054 26.167 526.0 156560.0 25 0 16898.0 + 29983 QTALPGNDRY 10 115 567.7821374924224 1133.5497220516447 2 567.7812988162041 MULTI CID FTMS 0 0 0 5042 85697.1875 1.0 0 0.0 12 Unmodified _QTALPGNDRY_ ENSG00000155313|ENST00000400183|USP25;nc|ENSG00000155313|Q9UHP3-1|USP25;nc|ENSG00000155313|Q9UHP3|USP25 38.61474834105838 0.1721950110283317 2 [NP]A{[HG]|PP}{M(Oxidation (M))|F}P{I|L}ANP 11 9 + 54.507 0.0 0.0 4.8085 4.8085 80.047 0.0 0.0 0.0 7.520164088830903 7.520164088830903 7.520164088830903 7.520164088830903 0 0.9124379954164592 1.154901959985743 0.0 0.7134679910804405 [NP]A{[HG]|PP}{M(Oxidation (M))|F}P{I|L}ANP;[QT]A{I|L}Y[YQ]T{M(Oxidation (M))|F};[NP]E[WP]P{I|L}ANP;[DP]Q[WP]P{I|L}ANP;[QT]A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L}ANP;[NP]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{I|L}ANP;[QT]A{I|L}Y[YG]RY;[QT]A{I|L}Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ANP;[QT]A[EP]{[HG]|PP}{I|L}ANP;[QT]A{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{M(Oxidation (M))|F} 4.8085;4.1451;4.0436;3.9924;3.8683;3.8527;3.6838;3.2416;3.2398;3.1382 -;-;-;-;-;-;-;-;-;- 602 1 2.04 70275.3 1.0 1774 3278 5042 DOHH2_400M_050219_2,5054 DOHH2_400M_050219_2,5054,QTALPGNDRY False True QTALPGNDRY 26.166772 567.781298816204 577275.375 5042.0 ENSG00000155313|ENST00000400183|USP25;;nc|ENSG00000155313|Q9UHP3-1|USP25;;nc|ENSG00000155313|Q9UHP3|USP25 7.735147476196289 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5056 26.171 53.0 1250300.0 25 0 133670.0 -1 LPAPLLVLCP 10 74 364.8892078861163 1091.645794258549 3 364.8889953494072 MULTI CID FTMS 0 0 0 5055 1145176.375 0.4418988207556271 2 -0.0972976684570312 1 Carbamidomethyl (C) _LPAPLLVLC(Carbamidomethyl (C))P_ ENSG00000187583|ENST00000379410|PLEKHN1;nc|ENSG00000187583|Q494U1-2|PLEKHN1;nc|ENSG00000187583|Q494U1-3|PLEKHN1 15.248480904072842 0.5916873121453583 2 {I|L}HKP{I|L}{I|L} 6 -1 53.589 0.0 0.0 4.909 0.0 0.0 0.0 387.16221033267817 387.16221033267817 43.066884185923655 0.0 0.0 0.0 0 0.8182503180159344 1.6989700043360187 0.0 0.0 {I|L}HKP{I|L}{I|L} 4.909 - 101 + 1 2.04 60431.1 1.0 1775 3279 5055 DOHH2_400M_050219_2,5056 DOHH2_400M_050219_2,5056,LPAPLLVLCP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5057 26.178 350.0 293140.0 25 0 30780.0 -1 VLFVEDGKME 10 97 591.7900694490023 1181.5655859648043 2 591.7903320193291 MULTI CID FTMS 0 0 0 5055 256250.921875 0.5277376630663289 3 -0.1877803802490234 2 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 34.93206674587334 0.2110832994570416 2 EGK[{M(Oxidation (M))|F}E] 5 -1 37.703 0.0 0.0 3.1909 0.0 0.0 573.3375111310562 0.0 573.3375111310562 0.0 22.0356292685378 0.0 0.0 0 1.3494850021680094 0.0 0.3494850021680094 0.0 EGK[{M(Oxidation (M))|F}E] 3.1909 - 102 1 2.04 84758.0 1.0 1776 3279 5055 DOHH2_400M_050219_2,5057 DOHH2_400M_050219_2,5057,VLFVEDGKME False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5059 26.182 101.0 682050.0 25 0 42490.0 + 4573 DAYRRIHSL 9 97 377.54075802284194 1129.600444668726 3 377.5403625369072 MULTI CID FTMS 0 0 0 5058 463485.375 0.724298460231185 -1 0.0108966827392578 1 Unmodified _DAYRRIHSL_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-4|BRCC3;nc|ENSG00000185515|P46736|BRCC3 32.78568957990786 0.1150597335874693 2 {I|L}D[YV]V{[QG]|[NA]}HS 9 6 40.93 0.0 0.0 3.6234 0.0 0.0 0.0 128.07224451236564 128.07224451236564 17.769790682657252 0.0 0.0 0.0 0 0.8494850021680094 1.2218487496163564 1.2302046884880935 0.0 {I|L}D[YV]V{[QG]|[NA]}HS 3.6234 - 193 + 1 2.04 58470.6 1.0 1777 3280 5058 DOHH2_400M_050219_2,5059 DOHH2_400M_050219_2,5059,DAYRRIHSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5060 26.186 180.0 383040.0 25 0 42225.0 + 38606 TTEERTQLY 9 93 570.7811424473375 1139.547731961475 2 570.7808715701103 MULTI CID FTMS 0 0 0 5058 341973.71875 0.7302061816596865 2 -0.1768836975097656 2 Unmodified _TTEERTQLY_ ENSG00000143643|ENST00000366661|TTC13;ENST00000471302.2_1_1:231047214-231057243:-|nuORF;nc|ENSG00000143643|Q8NBP0-2|TTC13 36.39500950444726 0.095246261068787 2 TTE[HT][Y{I|L}]{I|L}Y 9 4 + 71.533 0.0 0.0 6.2773 6.2773 89.537 0.0 0.0 0.0 53.62781577388333 16.478174818886373 16.478174818886373 9.771212547196626 0 1.2614393726401687 1.6989700043360187 0.3054621874040891 0.0 TTE[HT][Y{I|L}]{I|L}Y;TTEERR[VS]Y;TTE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}RR[PS] 6.2773;5.4198;3.0424 -;-;- 172 + 1 2.04 55408.2 1.0 1778 3280 5058 DOHH2_400M_050219_2,5060 DOHH2_400M_050219_2,5060,TTEERTQLY True True TTEERTQLY 26.185699 570.78087157011 2214279.25 5058.0 ENSG00000143643|ENST00000366661|TTC13;;nc|ENSG00000143643|Q8NBP0-2|TTC13;;ENST00000471302.2_1_1:231047214-231057243:-|nuORF 6.982631842295329 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5061 26.2 800.0 302670.0 25 0 21851.0 24699 MNISQMITYWG 11 133 672.3097838559966 1342.605014778793 2 672.3094970583916 MULTI CID FTMS 0 0 0 5058 260929.515625 0.5046488038490349 -1 0.0108966827392578 3 Unmodified _MNISQMITYWG_ ENSG00000182333|ENST00000238983|LIPF;nc|ENSG00000182333|P07098-2|LIPF;nc|ENSG00000182333|P07098-3|LIPF;nc|ENSG00000182333|P07098-4|LIPF 21.53697664764585 0.586507868110548 2 [MN]PN{I|L}NADQR[NG] 12 9 + 92.22 0.0 0.0 6.8688 6.8688 80.985 0.0 0.0 0.0 32.9402281476392 0.7133375178436552 0.7133375178436552 1.8089014193745072 0 0.7614393726401688 1.5228787452803376 0.3252574989159953 2.2302046884880937 [MN]PN{I|L}NADQR[NG];[MN]PN{I|L}NADGAR[NG];[MN]PN{I|L}GGADQR[NG];[MN]PGG{I|L}NADQR[NG];[MN]PN{I|L}GGADGAR[NG];[MN]PGG{I|L}NADGAR[NG];[MN]PN{I|L}NWQR[NG];[MN]PN{I|L}NWGAR[NG];[MN]PN{I|L}NAGDAR[NG];[MN]PN{I|L}NAGWR[NG] 6.8688;6.734;6.1911;6.1911;6.0583;6.0583;5.9478;5.8108;5.7161;5.6086 -;-;-;-;-;-;-;-;-;- 3751 + 1 2.04 175595.5 0.959999978542328 1779 3280 5058 DOHH2_400M_050219_2,5061 DOHH2_400M_050219_2,5061,MNISQMITYWG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5062 26.203 154.0 309810.0 25 0 27895.0 + 836 AETGNLPHSY 10 79 544.7540243448512 1087.4934957565024 2 544.7535278201103 MULTI CID FTMS 0 0 0 5058 261254.984375 0.7963790497626435 1 -0.0864009857177734 4 Unmodified _AETGNLPHSY_ ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37 41.95555342248728 0.1369168616057562 2 {[CP]|[EA]}TGN{I|L}PHSY 10 0 + 64.161 0.0 0.0 5.8999 5.8999 90.149 0.0 0.0 0.0 43.043132534128574 12.306634937682157 12.306634937682157 16.906814518019395 0 0.4247425010840047 0.0 0.4247425010840047 0.7742275032520141 + + {[CP]|[EA]}TGN{I|L}PHSY;{[CP]|[EA]}TGGG{I|L}PHSY;{[CP]|[EA]}TGNA[Y{I|L}]SY;{[CP]|[EA]}TG[VS]K{M(Oxidation (M))|F}SY;{[CP]|[EA]}T{[QD]|[EN]|[WG]|[KD]|[RS]}K{M(Oxidation (M))|F}SY;{NN|[MP]|[D{I|L}]|[EV]}HH{I|L}NG[WP];{[SA]|[TG]}N{[ET]|[MV]}{I|L}NG[WP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HM]{I|L}NG[WP];[TA]WWANG[WP];{[CP]|[EA]}TNK[Y{I|L}]SY 5.8999;4.3453;3.7892;3.391;3.0671;2.9384;2.5852;2.5624;2.4972;2.3106 +;-;-;-;-;-;-;-;-;- + 466 + 1 2.04 41901.4 1.0 1780 3280 5058 DOHH2_400M_050219_2,5062 DOHH2_400M_050219_2,5062,AETGNLPHSY False True AETGNLPHSY 26.202609 544.75352782011 1598543.0 5058.0 nc|ENSG00000135913|Q86T82-2|USP37;;ENSG00000135913|ENST00000258399|USP37 8.467605113983154 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5063 26.207 229.0 368090.0 25 0 33091.0 + 42301 VSSTSEIGTRY 11 97 600.2988042291954 1198.5830555251907 2 600.2993652224541 MULTI CID FTMS 0 0 0 5058 254067.734375 0.5472806769069545 -1 0.0108966827392578 5 Unmodified _VSSTSEIGTRY_ ENSG00000103994|ENST00000564754|ZNF106;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106 41.34703777101937 0.1916454788238683 2 VSSTSE{I|L}GTYR 11 2 + 99.793 0.0 0.0 8.3259 8.3259 96.79 0.0 0.0 0.0 76.96338520769709 13.953953402936476 13.953953402936476 22.316085869055115 0 0.4247425010840047 2.0 0.4247425010840047 0.2887254899964357 VSSTSE{I|L}GTYR;VSS[WM]{I|L}GTYR;VSSTS[KQ][SG]YR;VS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[W{I|L}]TYR;[PA][RN]G{I|L}ESTSAP;WSTS[W{I|L}]TYR;W{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L}GTYR;{[MG]|[TS]}[H{I|L}]G{I|L}ESTSAP;[PA]S[EP][KQ]STSAP;WST[QP][YV]YR 8.3259;6.464;5.3116;4.6161;4.2258;3.9063;3.8961;3.5923;2.7961;2.5931 -;-;-;-;-;-;-;-;-;- 343 + 1 2.04 67136.0 1.0 1781 3280 5058 DOHH2_400M_050219_2,5063 DOHH2_400M_050219_2,5063,VSSTSEIGTRY False True VSSTSEIGTRY 26.206917 600.299365222454 1942242.875 5058.0 nc|ENSG00000103994|Q9H2Y7|ZNF106;;nc|ENSG00000103994|Q9H2Y7-2|ZNF106;;ENSG00000103994|ENST00000564754|ZNF106 6.379989941914876 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5064 26.213 348.0 302930.0 25 0 31592.0 + 25440 NEGRSSVACIQ 11 115 582.2759131984387 1162.5372734636774 2 582.2765380740166 MULTI CID FTMS 0 0 0 5058 174384.625 0.5153248981088989 -1 0.0108966827392578 6 Unmodified _NEGRSSVACIQ_ REV__ENST00000547005.5_1_12:108959188-108962689:+|nuORF 33.4449034751529 0.3133739643825231 2 {[QG]|[NA]}D[DV]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N{I|L}Q 10 -1 + 53.922 0.0 0.0 4.6383 4.6383 84.008 0.0 0.0 0.0 10.368931070804592 43.326199041710055 10.368931070804592 12.42992819099939 0 1.7614393726401687 1.5228787452803376 0.0 1.174742501084005 {[QG]|[NA]}D[DV]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N{I|L}Q;{[QG]|[NA]}D[DV]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}NQ;{[QG]|[NA]}D[DV]{[QG]|[NA]}GK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};EEQQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N{I|L}Q;EEQQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}NQ 4.6383;3.5691;2.6683;1.8537;0.7845 -;-;-;-;- 325 1 2.04 83670.2 1.0 1782 3280 5058 DOHH2_400M_050219_2,5064 DOHH2_400M_050219_2,5064,NEGRSSVACIQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5065 26.227 800.0 195750.0 25 0 12872.0 40022 VGEWKNDKRS 10 133 609.814142728549 1217.613732523898 2 609.8144409060478 MULTI CID FTMS 0 0 0 5058 130574.546875 0.6426773609715499 -1 0.0108966827392578 7 Unmodified _VGEWKNDKRS_ ENSG00000154118|ENST00000284262|JPH3 20.453626601364224 0.5043500229302764 2 [VG]Q[WK]DPSQS 10 5 74.536 0.0 0.0 6.1215 0.0 0.0 0.0 102.05889639324064 102.05889639324064 48.83008036311672 0.0 0.0 0.0 0 0.8807196863200843 1.0457574905606752 1.610924374808178 1.579689690656103 [VG]Q[WK]DPSQS 6.1215 - 2127 1 2.04 118100.8 0.6800000071525574 1783 3280 5058 DOHH2_400M_050219_2,5065 DOHH2_400M_050219_2,5065,VGEWKNDKRS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5066 26.241 800.0 198310.0 25 0 11718.0 + 30532 RELEKDMHYY 10 124 692.3218576690961 1382.629162404992 2 692.3234741091728 MULTI CID FTMS 0 0 0 5058 92944.578125 0.7015140960220411 -1 0.0108966827392578 8 Unmodified _RELEKDMHYY_ ENSG00000083750|ENST00000374941|RRAGB;ENSG00000155876|ENST00000380527|RRAGA;ENST00000474757.1_1_X:55757854-55777647:+|nuORF;ENST00000498762.1_1_X:55748624-55758085:+|nuORF;nc|ENSG00000083750|Q5VZM2|RRAGB 35.079672537005266 0.2095246155385646 2 {[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}RSMHYY 10 5 + 77.59 0.0 0.0 5.6118 5.6118 78.331 0.0 0.0 0.0 16.962724883926654 57.66863633933055 16.962724883926654 3.0102999566398125 0 1.7302046884880935 1.3979400086720375 0.2887254899964357 0.8807196863200843 {[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}RSMHYY;{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}KDMHYY;{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}[VG]SMHYY;[NP]{I|L}T{[YC]|[HE]}[{I|L}P]HYY;{[WN]|[YH]}M{[QD]|[EN]|[WG]|[KD]|[RS]}{[QV]|[N{I|L}]|[RA]|[KV]}HYY;{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}RSY[HM]Y;{[WN]|[YH]}P[Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]}HYY;{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}KDY[HM]Y;{[WN]|[YH]}P[YN]{[QV]|[N{I|L}]|[RA]|[KV]}HYY;[HM]Y{[QD]|[EN]|[WG]|[KD]|[RS]}{[QV]|[N{I|L}]|[RA]|[KV]}HYY 5.6118;5.3941;4.9489;3.3231;3.2535;3.1481;3.0777;2.9304;2.86;2.5875 -;-;-;-;-;-;-;-;-;- 539 1 2.04 112440.2 0.6100000143051147 1784 3280 5058 DOHH2_400M_050219_2,5066 DOHH2_400M_050219_2,5066,RELEKDMHYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5067 26.252 639.0 346770.0 25 0 34447.0 + 44256 YLKNREVRL 9 157 397.5715050317306 1189.692685695392 3 397.5716125369072 MULTI CID FTMS 0 0 0 5058 90143.703125 0.549424362162382 -1 0.0108966827392578 9 Unmodified _YLKNREVRL_ ENSG00000198876|ENST00000361264|DCAF12 26.020703789607367 0.2001090068861241 2 Y{I|L}{I|L}{[RE]|[WV]}E{I|L}VR 9 4 + 57.194 0.0 0.0 4.8074 4.8074 75.469 0.0 0.0 0.0 33.72420634723214 0.9513892710894822 0.9513892710894822 3.252574989159953 0 0.3054621874040891 2.0 0.0 1.1989700043360187 Y{I|L}{I|L}{[RE]|[WV]}E{I|L}VR;Y{I|L}K[RN]E{I|L}VR;{I|L}Y{I|L}{[RE]|[WV]}E{I|L}VR;{I|L}YK[RN]E{I|L}VR;Y{I|L}{I|L}{[RE]|[WV]}E[RV]{I|L};Y{I|L}K[RN]E[RV]{I|L};{I|L}Y{I|L}{[RE]|[WV]}E[RV]{I|L};{I|L}YK[RN]E[RV]{I|L};{[TV]|[{I|L}S]}[VP]M{I|L}QK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[TV]|[{I|L}S]}[VP]M{I|L}[AG]K{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.8074;4.534;4.1974;3.924;3.8449;3.5715;3.2349;2.9615;1.6382;0.86791 -;-;-;-;-;+;-;-;-;- + 201 + 1 2.04 172539.5 1.0 1785 3280 5058 DOHH2_400M_050219_2,5067 DOHH2_400M_050219_2,5067,YLKNREVRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5068 26.257 167.0 521440.0 25 0 78300.0 + 25555 NEVDGEYRY 9 91 572.7495790919379 1143.4846052506757 2 572.7488891482353 MULTI CID FTMS 0 0 0 5058 270113.125 0.6978574656309868 -1 0.0108966827392578 10 Unmodified _NEVDGEYRY_ ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071|PRDM15 47.594388314883695 0.0456443387682827 2 {[QD]|[EN]|[WG]|[KD]|[RS]}VDGEYRY 9 0 + 49.658 0.0 0.0 4.3427 4.3427 69.792 0.0 0.0 0.0 37.19347610865451 10.14474130034248 10.14474130034248 0.4575749056067479 0 1.0 0.0 0.3807196863200844 0.3054621874040891 + + {[QD]|[EN]|[WG]|[KD]|[RS]}VDGEYRY;{[QD]|[EN]|[WG]|[KD]|[RS]}VDWYRY;{[QD]|[EN]|[WG]|[KD]|[RS]}VDGE[TP]{[{M(Oxidation (M))|F}H]|[RQ]};{[QD]|[EN]|[WG]|[KD]|[RS]}VDW[TP]{[{M(Oxidation (M))|F}H]|[RQ]};{[QD]|[EN]|[WG]|[KD]|[RS]}VY[WD]RY;{[QD]|[EN]|[WG]|[KD]|[RS]}VDY{[DA]|[EG]}RY;{[QD]|[EN]|[WG]|[KD]|[RS]}VDG[YR]EY;{[QD]|[EN]|[WG]|[KD]|[RS]}VYD{[DA]|[EG]}RY;{[QD]|[EN]|[WG]|[KD]|[RS]}YV[WD]RY;{[QD]|[EN]|[WG]|[KD]|[RS]}VDYVNEY 4.3427;4.3026;2.7488;2.704;2.6629;2.5489;2.351;2.2856;2.2256;2.1736 +;-;-;-;-;-;-;-;-;- + 371 + 1 2.04 72616.0 1.0 1786 3280 5058 DOHH2_400M_050219_2,5068 DOHH2_400M_050219_2,5068,NEVDGEYRY True True NEVDGEYRY 26.256788 572.748889148235 1818434.375 5058.0 nc|ENSG00000141956|P57071-3|PRDM15;;nc|ENSG00000141956|P57071-6|PRDM15;;nc|ENSG00000141956|P57071-2|PRDM15;;ENSG00000141956|ENST00000398548|PRDM15;;nc|ENSG00000141956|P57071|PRDM15;;nc|ENSG00000141956|P57071-5|PRDM15 7.641565799713135 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5069 26.264 409.0 299820.0 25 0 62851.0 + -1 SRCKLFRP 8 129 532.295173190789 0 532.2950927615166 PEAK CID FTMS 0 0 0 5058 193831.828125 0.7848842098043673 2 -0.1768836975097656 11 Carbamidomethyl (C) _SRC(Carbamidomethyl (C))KLFRP_ REV__ENST00000608796.5_1_9:131051046-131051265:+|nuORF 7.910154910731844 0.5650536163073903 2 MSTN 4 -1 13.487 0.0 0.0 1.2693 0.0 0.0 188.14515093427292 438.2478731744751 626.393024108748 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MSTN 1.2693 - 69 + 1 2.04 96775.9 1.0 1787 3280 5058 DOHH2_400M_050219_2,5069 DOHH2_400M_050219_2,5069,SRCKLFRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5071 26.274 350.0 223960.0 25 0 17980.0 + 5548 DMKRHRIQF 9 105 410.8891221333693 1229.645537000308 3 410.8888122439384 MULTI CID FTMS 0 0 0 5070 93999.7890625 0.0841038560250594 4 -0.2273597717285156 1 Unmodified _DMKRHRIQF_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 16.942295170755138 0.3780752226737986 2 DM 2 7 36.198 0.0 0.0 2.9438 0.0 0.0 0.0 980.5556505197452 980.5556505197452 22.703037561203843 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + DM 2.9438 + + 16 + 1 2.04 67685.7 1.0 1788 3281 5070 DOHH2_400M_050219_2,5071 DOHH2_400M_050219_2,5071,DMKRHRIQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5072 26.275 66.0 857140.0 25 0 38987.0 + 6790 EEALHASHGF 10 94 549.2537265238993 1096.4929001145986 2 549.2532836794853 MULTI CID FTMS 0 0 0 5070 671670.9375 1.0 0 0.0 2 Unmodified _EEALHASHGF_ ENSG00000186010|ENST00000507754|NDUFA13;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13 74.92900055777586 0.0187778523875693 2 EEA{I|L}HASHG{M(Oxidation (M))|F} 10 0 + 78.382 0.0 0.0 7.1484 7.1484 95.083 0.0 0.0 0.0 57.41312192373542 14.146518864155126 14.146518864155126 24.19129307741976 0 1.1549471895720984 2.0 0.0 0.0 + + EEA{I|L}HASHG{M(Oxidation (M))|F};EEA{I|L}HA[HQ]Y;EEA{I|L}HA[DC][{I|L}P];EEA{I|L}H{[C(Carbamidomethyl (C))E]|[WC]}[{I|L}P];EEA[TA][HV]HG{M(Oxidation (M))|F};EEA{I|L}{[{M(Oxidation (M))|F}D]|MM}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F};{[ET]|[MV]}{[WT]|[RM]}H{I|L}A[HC];EEA{I|L}[KC]{[QN]|[E{I|L}]|[KN]}Y;EE{[QD]|[EN]|[WG]|[KD]|[RS]}[HV]HG{M(Oxidation (M))|F} 7.1484;4.9422;4.438;4.1168;3.5637;3.4031;3.2211;2.8652;2.5806 +;-;-;-;-;-;-;-;- + 195 + 1 2.04 48205.7 1.0 1789 3281 5070 DOHH2_400M_050219_2,5072 DOHH2_400M_050219_2,5072,EEALHASHGF True True EEALHASHGF 26.275098 549.253283679485 5205543.625 5070.0 ENST00000586674.1_1_19:19627047-19643527:+|nuORF;;nc|ENSG00000186010|Q9P0J0-2|NDUFA13;;ENSG00000186010|ENST00000507754|NDUFA13 9.196219762166342 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5073 26.278 157.0 598970.0 25 0 47576.0 + 32708 SEAGPNQTF 9 122 475.71431196916274 949.4140710051256 2 475.7144653201103 MULTI CID FTMS 0 0 0 5070 468379.78125 0.6181705390880403 -2 0.0972976684570312 3 Unmodified _SEAGPNQTF_ ENSG00000163565|ENST00000295809|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16 32.30548876998284 0.1201446275138228 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{M(Oxidation (M))|F}KCT{M(Oxidation (M))|F} 8 5 + 31.208 0.0 0.0 3.2871 3.2871 79.005 0.0 0.0 0.0 6.989700043360188 10.66077246861235 6.989700043360188 10.66077246861235 0 0.3182503180159344 0.0 0.2614393726401688 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{M(Oxidation (M))|F}KCT{M(Oxidation (M))|F};[NP]GAGT{M(Oxidation (M))|F}A{[ES]|[DT]|[{I|L}C]};[NP]QGT{M(Oxidation (M))|F}A{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{M(Oxidation (M))|F}T][NS]T{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{M(Oxidation (M))|F}T[KC]{M(Oxidation (M))|F};[PG]NAGT{M(Oxidation (M))|F}A{[ES]|[DT]|[{I|L}C]};[NP]GATG{M(Oxidation (M))|F}A{[ES]|[DT]|[{I|L}C]};[NP]QTG{M(Oxidation (M))|F}A{[ES]|[DT]|[{I|L}C]};[PG]GQGT{M(Oxidation (M))|F}A{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{M(Oxidation (M))|F}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F} 3.2871;2.1642;2.1103;2.0315;1.9755;1.8156;1.7285;1.6746;1.5596;1.5398 -;-;-;-;-;-;-;-;-;- 1188 + 1 2.04 80320.1 1.0 1790 3281 5070 DOHH2_400M_050219_2,5073 DOHH2_400M_050219_2,5073,SEAGPNQTF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5074 26.287 477.0 255400.0 25 0 29806.0 + 25577 NEYPTPRSY 9 125 563.7609295308226 1125.5073061284452 2 563.7612182497978 MULTI CID FTMS 0 0 0 5070 215676.75 0.9336207473802328 2 -0.1556205749511718 4 Unmodified _NEYPTPRSY_ ENSG00000237651|ENST00000432605|C2orf74 69.10491478415734 0.0214449631113747 2 {[QD]|[EN]|[WG]|[KD]|[RS]}YR{I|L}[PG]DY 9 4 + 41.927 0.0 0.0 3.7252 3.7252 77.059 0.0 0.0 0.0 4.570065775072997 28.43249656918104 4.570065775072997 8.694153435175792 0 1.218765315847925 0.0 0.9361818737241736 0.5994850021680094 {[QD]|[EN]|[WG]|[KD]|[RS]}YR{I|L}[PG]DY;{[QD]|[EN]|[WG]|[KD]|[RS]}YPTKK[C(Carbamidomethyl (C))S];{[QD]|[EN]|[WG]|[KD]|[RS]}YRHHDR;{[QD]|[EN]|[WG]|[KD]|[RS]}Y[KS]{[QS]|[NT]}DR;{[QD]|[EN]|[WG]|[KD]|[RS]}Y[VG]HHDR;{[QD]|[EN]|[WG]|[KD]|[RS]}VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QDY;{[QD]|[EN]|[WG]|[KD]|[RS]}Y[KS][NP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QD]|[EN]|[WG]|[KD]|[RS]}Y[VG]{I|L}W[{M(Oxidation (M))|F}V];[TP]{[QD]|[EN]|[WG]|[KD]|[RS]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QDY;{[CP]|[EA]}{M(Oxidation (M))|F}VVRQDY 3.7252;2.9527;2.3927;1.5936;1.5698;1.432;1.0749;0.71918;0.33209;0.2375 -;-;-;-;-;-;-;-;-;- 281 1 2.04 98418.5 1.0 1791 3281 5070 DOHH2_400M_050219_2,5074 DOHH2_400M_050219_2,5074,NEYPTPRSY True True NEYPTPRSY 26.286657 563.761218249798 7091813.5 5070.0 ENSG00000237651|ENST00000432605|C2orf74 6.50739860534668 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5075 26.29 190.0 299760.0 25 0 26295.0 + -1 KMKEIAEAY 9 93 541.7802341895322 1081.5459154458642 2 541.7812988162041 MULTI CID FTMS 0 0 0 5070 199513.125 1.0 0 0.0 5 Carbamidomethyl (C) _PRRC(Carbamidomethyl (C))FLAY_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000204388|ENST00000375650|HSPA1B;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENSG00000204389|ENST00000375651|HSPA1A;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 24.67388899826682 0.525179942228231 2 KNH{I|L}EAY 7 -1 55.209 0.0 0.0 5.1046 0.0 0.0 208.1031971662125 0.0 208.1031971662125 0.0 41.71993921133682 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 KNH{I|L}EAY 5.1046 - 340 1 2.04 50980.6 1.0 1792 3281 5070 DOHH2_400M_050219_2,5075 DOHH2_400M_050219_2,5075,PRRCFLAY False False KMKEIAEAY 26.290317 541.781298816204 1391392.625 5070.0 ENSG00000109971|ENST00000534624|HSPA8;;ENSG00000126803|ENST00000247207|HSPA2;;nc|ENSG00000109971|P11142-2|HSPA8;;ENSG00000204388|ENST00000375650|HSPA1B;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENSG00000204389|ENST00000375651|HSPA1A;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 3.961101373036703 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5076 26.298 444.0 262070.0 25 0 16617.0 + 24218 MAKQEGMEM 9 152 527.7225450048675 1053.4305370765348 2 527.7216064333916 MULTI CID FTMS 0 0 0 5070 177845.265625 1.0 0 0.0 6 Unmodified _MAKQEGMEM_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 72.96794272382148 0.0199516581995792 2 {[DS]|[MA]|[CV]|TT}DQKAMEM 9 3 + 69.488 0.0 0.0 6.5963 6.5963 77.649 0.0 0.0 0.0 5.079015433336167 44.86855180969256 5.079015433336167 0.0886438348021556 0 1.305462187404089 1.3979400086720375 1.055462187404089 1.0629529932484498 {[DS]|[MA]|[CV]|TT}DQKAMEM;{[DS]|[MA]|[CV]|TT}[KQ]EGMEM;{[DS]|[MA]|[CV]|TT}[KQ]DAMEM;{[DS]|[MA]|[CV]|TT}[KQ]WMEM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQKAMEM;M{M(Oxidation (M))|F}MGC(Carbamidomethyl (C))[KP]SP;{[DS]|[MA]|[CV]|TT}D[AG]KAMEM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VVEGMEM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VVDAMEM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VVWMEM 6.5963;6.5879;6.3022;6.2587;6.0294;5.8627;5.3905;5.3437;5.0579;5.0145 -;+;-;-;-;-;-;-;-;- + 2779 1 2.04 93888.2 1.0 1793 3281 5070 DOHH2_400M_050219_2,5076 DOHH2_400M_050219_2,5076,MAKQEGMEM True True MAKQEGMEM 26.298211 527.721606433392 743962.4375 5070.0 nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;nc|ENSG00000072571|O75330-4|HMMR;;ENSG00000072571|ENST00000393915|HMMR 5.647323131561279 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5077 26.304 348.0 317030.0 25 0 43835.0 40270 VGTRVRPL 8 107 449.28537570605016 896.5561984789003 2 449.2859985232353 MULTI CID FTMS 0 0 0 5070 105648.640625 1.0 0 0.0 7 Unmodified _VGTRVRPL_ ENST00000552014.5_1_12:113737449-113737581:-|nuORF 5.760428011301431 0.7893668129297577 2 {I|L} 1 7 10.713 0.0 0.0 1.1949 0.0 0.0 765.4607070011645 0.0 765.4607070011645 0.0 0.2557626122369054 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1949 + + 58 + 1 2.04 88510.9 1.0 1794 3281 5070 DOHH2_400M_050219_2,5077 DOHH2_400M_050219_2,5077,VGTRVRPL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5078 26.318 800.0 135960.0 25 0 11475.0 + 11152 GEKPDPDQTF 10 139 567.2590148090429 1132.5034766848858 2 567.2596313357353 MULTI CID FTMS 0 0 0 5070 106699.3125 1.0 0 0.0 8 Unmodified _GEKPDPDQTF_ ENSG00000004897|ENST00000066544|CDC27;ENST00000525495.6_2_17:45219385-45266538:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 43.9818466556824 0.1155196613165264 2 [DP]QTP{[CP]|[EA]}QT{M(Oxidation (M))|F} 10 6 + 53.589 0.0 0.0 4.7319 4.7319 79.187 0.0 0.0 0.0 10.0 12.183047191178446 10.0 6.760912590556806 0 0.5 0.9208187539523752 0.6923877696554315 0.805462187404089 [DP]QTP{[CP]|[EA]}QT{M(Oxidation (M))|F};[DP]QTPAAWT{M(Oxidation (M))|F};[DP]Q[EP][TA]QT{M(Oxidation (M))|F};[DP]Q[VS][DP]QT{M(Oxidation (M))|F};[DP]QTP{[CP]|[EA]}[AG]T{M(Oxidation (M))|F};[NP]ETP{[CP]|[EA]}QT{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}[PG]NWT{M(Oxidation (M))|F};[DP][AG]TP{[CP]|[EA]}QT{M(Oxidation (M))|F};[DP]Q[VS][PG]WT{M(Oxidation (M))|F};[DP]QTPAA{[DA]|[EG]}T{M(Oxidation (M))|F} 4.7319;4.1349;4.1108;3.9682;3.9227;3.8489;3.6561;3.5476;3.3712;3.3257 -;-;-;-;-;-;-;-;-;- 1551 1 2.04 87745.4 0.6299999952316284 1795 3281 5070 DOHH2_400M_050219_2,5078 DOHH2_400M_050219_2,5078,GEKPDPDQTF True True GEKPDPDQTF 26.318325 567.259631335735 705855.5 5070.0 ENST00000525495.6_2_17:45219385-45266538:-|nuORF;;ENSG00000004897|ENST00000066544|CDC27;;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;;nc|ENSG00000004897|P30260-2|CDC27 5.753420352935791 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5079 26.325 384.0 279710.0 25 0 13594.0 -1 0 106 605.2912002213106 1812.851771264132 3 605.2881957888603 MULTI CID FTMS 0 0 0 5070 133978.921875 1.0 0 0.0 9 2 [DP][W{I|L}]{I|L}SGGSG 10 -1 19.319 0.0 0.0 1.0657 0.0 0.0 0.0 840.376347715844 840.376347715844 5.189549981487078 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 [DP][W{I|L}]{I|L}SGGSG 1.0657 - 791 1 2.04 81991.6 1.0 1796 3281 5070 DOHH2_400M_050219_2,5079 DOHH2_400M_050219_2,5079, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5080 26.339 800.0 49745.0 25 0 7329.5 -1 0 42 1100.1280253355287 3297.3622466067864 3 1100.462939441204 MULTI CID FTMS 0 0 0 5070 106646.859375 0.8457198544827347 1 -0.0904827117919921 10 2 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.33266 0.0 0.0 1709.6026773702613 1380.6609591119752 3090.2636364822365 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.33266 - 8 + 1 2.04 38364.7 0.4699999988079071 1797 3281 5070 DOHH2_400M_050219_2,5080 DOHH2_400M_050219_2,5080, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5081 26.354 800.0 68184.0 25 0 3075.9 + -1 SCCCCCCCRPG 11 76 711.7032044848862 0 711.3659545779228 PEAK CID FTMS 0 0 0 5070 75564.984375 1.0 0 0.0 11 5 Carbamidomethyl (C) _SC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CCRPG_ REV__ENST00000498308.1_1_7:5111775-5112846:+|nuORF 0.0 0.4761840153648598 2 DN 2 -1 6.4537 0.0 0.0 0.45404 0.0 0.0 992.2067496906724 197.09348474674064 1189.300234437413 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DN 0.45404 - 19 + 1 2.04 44829.3 0.6100000143051147 1798 3281 5070 DOHH2_400M_050219_2,5081 DOHH2_400M_050219_2,5081,SCCCCCCCRPG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5083 26.359 5.8 5240300.0 25 0 281050.0 + 26599 NVPWTRTI 8 65 493.7726763532853 985.5307997733704 2 493.7729064822197 MULTI CID FTMS 0 0 0 5082 7313320.5 0.3187721546309771 1 -0.0651378631591796 1 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 18.13498045792455 0.6430038125133779 2 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L} 9 -1 + 25.352 0.0 0.0 2.5724 2.5724 76.703 0.0 0.0 0.0 1.8521903357757488 -2.852809580671046 -2.852809580671046 9.208187539523752 0 0.6989700043360187 0.0 0.0 0.0 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GGGT{I|L} 2.5724;1.6381 -;- 125 1 2.043 33876.1 1.0 1799 3282 5082 DOHH2_400M_050219_2,5083 DOHH2_400M_050219_2,5083,NVPWTRTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5084 26.362 120.0 458910.0 25 0 70414.0 + 40949 VLTVTSLG 8 77 395.2396569355037 788.4647609378075 2 395.2393981814384 MULTI CID FTMS 0 0 0 5082 274657.71875 0.1174041811213697 3 -0.1368770599365234 2 Unmodified _VLTVTSLG_ REV__ENSG00000162493|ENST00000621990|PDPN;REV__nc|ENSG00000162493|Q86YL7-2|PDPN;REV__nc|ENSG00000162493|Q86YL7-3|PDPN;REV__nc|ENSG00000162493|Q86YL7-4|PDPN;REV__nc|ENSG00000162493|Q86YL7-5|PDPN;REV__nc|ENSG00000162493|Q86YL7-6|PDPN 9.347437153973935 0.7675937258251505 2 [{I|L}V]{[TV]|[{I|L}S]}ETK 7 -1 + 40.371 0.0 0.0 5.1202 5.1202 89.177 0.0 0.0 0.0 28.187339429602343 6.937499767655794 6.937499767655794 40.37122160467084 0 0.3807196863200844 2.0 0.3494850021680094 0.2134679910804404 [{I|L}V]{[TV]|[{I|L}S]}ETK 5.1202 - 64 + 1 2.043 51240.1 1.0 1800 3282 5082 DOHH2_400M_050219_2,5084 DOHH2_400M_050219_2,5084,VLTVTSLG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5085 26.363 23.0 2877200.0 25 0 384900.0 + 13298 HIVRKYLTL 9 76 381.5740887492665 1141.7004368479995 3 381.5739013552666 MULTI CID FTMS 0 0 0 5082 2149158.0 0.1484001820444285 6 -0.2606773376464844 3 Unmodified _HIVRKYLTL_ REV__ENST00000543751.5_1_9:36674915-36677167:+|nuORF 4.897010918128616 0.7437319958283661 2 {M(Oxidation (M))|F}[QP]K{I|L}K[R{I|L}]{I|L} 9 -1 + 30.423 0.0 0.0 2.6647 2.6647 74.279 0.0 0.0 0.0 17.658759741222777 3.5117444837840885 3.5117444837840885 8.283409326844268 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[QP]K{I|L}K[R{I|L}]{I|L};[PG]A{M(Oxidation (M))|F}K{I|L}K[R{I|L}]{I|L} 2.6647;1.9392 -;- 39 + 1 2.043 58829.7 1.0 1801 3282 5082 DOHH2_400M_050219_2,5085 DOHH2_400M_050219_2,5085,HIVRKYLTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5086 26.365 82.0 710150.0 25 0 70221.0 + 35483 STMSTNGIPR 10 73 532.2631970118431 1062.511841090486 2 532.2636596560478 MULTI CID FTMS 0 0 0 5082 515699.28125 1.0 0 0.0 4 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 41.95555342248728 0.1369168616057562 2 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 10 2 + 47.484 0.0 0.0 4.4691 4.4691 76.338 0.0 0.0 0.0 7.269987279362624 5.118833609788744 5.118833609788744 5.118833609788744 0 0.4247425010840047 0.0 0.0 0.6861818737241735 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}RP;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}PR;{[MG]|[TS]}MST{[QN]|[E{I|L}]|[KN]}VVP;{[TV]|[{I|L}S]}{I|L}{[QN]|[E{I|L}]|[KN]}TSDW;{[MG]|[TS]}M[{I|L}V][YN][HV];{[TV]|[{I|L}S]}{I|L}[DC][{I|L}V]DW 4.4691;3.9873;3.6065;3.1248;2.6562;2.1744;2.1335;1.812;0.55581;0.36161 -;+;-;-;-;-;-;-;-;- + 180 + 1 2.043 50500.1 1.0 1802 3282 5082 DOHH2_400M_050219_2,5086 DOHH2_400M_050219_2,5086,STMSTNGIPR False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5087 26.368 177.0 520500.0 25 0 81601.0 + -1 MPKLGKARLI 10 85 571.8573887121555 1141.700224491111 2 571.8574096560478 MULTI CID FTMS 0 0 0 5082 294982.1875 0.1465525255785308 6 -0.2606773376464844 5 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 24.020572477871973 0.4289996903560794 2 K{I|L}KQPE 6 -1 45.935 0.0 0.0 4.0234 0.0 0.0 400.2791310041032 0.0 400.2791310041032 0.0 30.12070344032047 0.0 0.0 0 1.079689690656103 0.0 0.0 0.4247425010840047 K{I|L}KQPE 4.0234 - 126 1 2.043 76557.8 1.0 1803 3282 5082 DOHH2_400M_050219_2,5087 DOHH2_400M_050219_2,5087,MPKLGKARLI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5088 26.372 193.0 510980.0 25 0 61360.0 + 6805 EEAPSRPAL 9 93 485.2535555767599 968.4925582203198 2 485.2542297244072 MULTI CID FTMS 0 0 0 5082 191670.90625 0.0209512921924641 -5 0.325653076171875 6 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 29.081581746732265 0.1611639662936252 2 EEAPSR[PA]{I|L} 9 0 + 41.889 0.0 0.0 4.3252 4.3252 84.286 0.0 0.0 0.0 27.05712702819017 4.269856214892371 4.269856214892371 19.54242509439324 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + EEAPSR[PA]{I|L};{[TV]|[{I|L}S]}VRSPA[HC];EE{I|L}{I|L}[R{M(Oxidation (M))|F}]Y;[PS]R[VS]{I|L}A[HC];{[ET]|[MV]}V[VG][KP][HC];[PS]R[SG]{I|L}{I|L}[HC] 4.3252;2.3074;2.0041;1.3083;1.0056;0.59788 +;-;-;-;-;- + 269 + 1 2.043 79071.0 1.0 1804 3282 5082 DOHH2_400M_050219_2,5088 DOHH2_400M_050219_2,5088,EEAPSRPAL False True EEAPSRPAL 26.371762 485.254229724407 180358736.0 5082.0 nc|ENSG00000173349|Q587I9|SFT2D3 6.968480110168457 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 5089 26.377 289.0 334930.0 25 0 24989.0 + 26346 NSELGSETRY 10 124 578.2670859552153 1154.5196189772305 2 578.2675048708916 MULTI CID FTMS 0 0 0 5082 181493.859375 1.0 0 0.0 7 Unmodified _NSELGSETRY_ ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1 67.08073823543168 0.0190306485248484 2 NSE{I|L}GSE 7 3 69.289 0.0 0.0 6.0015 0.0 0.0 0.0 435.2004659853767 435.2004659853767 56.81449880840034 0.0 0.0 0.0 0 1.0 1.2218487496163564 0.805462187404089 0.0 + NSE{I|L}GSE 6.0015 + + 347 + 1 2.043 76162.9 1.0 1805 3282 5082 DOHH2_400M_050219_2,5089 DOHH2_400M_050219_2,5089,NSELGSETRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5090 26.381 193.0 314920.0 25 0 19503.0 + 32883 SEIESNRSF 9 89 534.7515868064243 1067.4886206796484 2 534.7510253787041 MULTI CID FTMS 0 0 0 5082 158987.46875 0.5474974231802078 4 -0.140848159790039 8 Unmodified _SEIESNRSF_ ENSG00000119139|ENST00000377245|TJP2;nc|ENSG00000119139|Q9UDY2-2|TJP2;nc|ENSG00000119139|Q9UDY2-3|TJP2;nc|ENSG00000119139|Q9UDY2-4|TJP2;nc|ENSG00000119139|Q9UDY2-5|TJP2;nc|ENSG00000119139|Q9UDY2-6|TJP2;nc|ENSG00000119139|Q9UDY2-7|TJP2 34.93206674587334 0.1032771302489716 2 {[ES]|[DT]|[{I|L}C]}{I|L}ES[RN]AY 9 2 + 35.541 0.0 0.0 3.3294 3.3294 75.534 0.0 0.0 0.0 17.22575355680157 3.7186412232387127 3.7186412232387127 8.239087409443187 0 1.2614393726401687 0.0 0.3807196863200844 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}ES[RN]AY;{[ES]|[DT]|[{I|L}C]}{I|L}ES[RN]S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}[VS]{[WN]|[YH]}AY;{[QN]|[E{I|L}]|[KN]}S[VS]{[WN]|[YH]}AY;{[TV]|[{I|L}S]}E[VS]{[WN]|[YH]}AY;{[ES]|[DT]|[{I|L}C]}D[{I|L}T][RN]AY;[{I|L}T]D[VS]{[WN]|[YH]}AY 3.3294;2.5576;1.4657;1.335;0.55599;0.41265;0.22543 -;+;-;-;-;-;- + 136 + 1 2.043 54886.9 1.0 1806 3282 5082 DOHH2_400M_050219_2,5090 DOHH2_400M_050219_2,5090,SEIESNRSF True True SEIESNRSF 26.380802 534.751025378704 3355455.0 5082.0 nc|ENSG00000119139|Q9UDY2-3|TJP2;;nc|ENSG00000119139|Q9UDY2-5|TJP2;;nc|ENSG00000119139|Q9UDY2-6|TJP2;;nc|ENSG00000119139|Q9UDY2-4|TJP2;;ENSG00000119139|ENST00000377245|TJP2;;nc|ENSG00000119139|Q9UDY2-2|TJP2;;nc|ENSG00000119139|Q9UDY2-7|TJP2 5.320288022359212 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5091 26.387 337.0 224050.0 25 0 13366.0 25450 NEHVSQVF 8 104 480.23277922986 958.45100552652 2 480.2323791384697 MULTI CID FTMS 0 0 0 5082 132924.546875 0.1260091042302896 7 -0.2678184509277344 9 Unmodified _NEHVSQVF_ ENST00000414932.1_1_7:43908445-43909104:-|nuORF 29.081581746732265 0.4323690340403521 2 AV{M(Oxidation (M))|F} 3 6 30.93 0.0 0.0 3.2271 0.0 0.0 623.2670366710814 0.0 623.2670366710814 0.0 17.43501263708417 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 AV{M(Oxidation (M))|F} 3.2271 - 473 1 2.043 63421.6 1.0 1807 3282 5082 DOHH2_400M_050219_2,5091 DOHH2_400M_050219_2,5091,NEHVSQVF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5092 26.395 474.0 263550.0 25 0 25937.0 3544 CYCRFFNAF 9 125 585.744084782341 1169.473616631482 2 585.7435790896416 MULTI CID FTMS 0 0 0 5082 123304.453125 0.4509806039396972 -1 0.0904827117919921 10 Unmodified _CYCRFFNAF_ ENSG00000159723|ENST00000290953|AGRP 16.942295170755138 0.3780752226737986 2 DEAQQNA{M(Oxidation (M))|F} 8 6 71.552 0.0 0.0 6.1183 0.0 0.0 248.0909901349625 0.0 248.0909901349625 0.0 47.3518789151016 0.0 0.0 0 0.8494850021680094 0.0 0.6694451763165201 0.4247425010840047 DEAQQNA{M(Oxidation (M))|F} 6.1183 - 914 1 2.043 99017.2 1.0 1808 3282 5082 DOHH2_400M_050219_2,5092 DOHH2_400M_050219_2,5092,CYCRFFNAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5093 26.406 593.0 234660.0 25 0 27318.0 + 29861 QQSMCYYSEY 10 133 434.49719595529086 1300.4697584660726 3 434.4970886111259 MULTI CID FTMS 0 0 0 5082 104001.21875 0.0753391671606214 4 -0.140848159790039 11 Unmodified _QQSMCYYSEY_ REV__ENSG00000078295|ENST00000338316|ADCY2 1.9063754702782607 0.7178183895776981 2 TT{I|L}HY 5 -1 14.522 0.0 0.0 1.1167 0.0 0.0 667.1579753922128 0.0 667.1579753922128 0.0 4.433760376774071 0.0 0.0 0 0.0 0.0 0.0 0.0 TT{I|L}HY 1.1167 - 123 + 1 2.043 111384.4 1.0 1809 3282 5082 DOHH2_400M_050219_2,5093 DOHH2_400M_050219_2,5093,QQSMCYYSEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5094 26.42 800.0 84321.0 25 0 3204.4 + -1 MNYAMKMCRPV 11 124 680.307296412483 0 680.3056518435478 PEAK CID FTMS 0 0 0 5082 94425.25 1.0 0 0.0 12 Oxidation (M) _M(Oxidation (M))NYAMKMCRPV_ REV__ENSG00000164930|ENST00000358755|FZD6 8.745405648335112 0.4618489994582195 2 V 1 -1 6.9897 0.0 0.0 0.51448 0.0 0.0 486.1281934943482 770.3876893935255 1256.5158828878737 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.51448 + + 139 + 1 2.043 51812.5 0.5899999737739563 1810 3282 5082 DOHH2_400M_050219_2,5094 DOHH2_400M_050219_2,5094,MNYAMKMCRPV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5096 26.424 49.0 1083000.0 25 0 90586.0 + 12356 GTDGHVHLY 9 93 499.7380996828516 997.4616464325032 2 499.7379028201103 MULTI CID FTMS 0 0 0 5095 1005373.875 0.2717218978162359 2 -0.0717391967773437 1 Unmodified _GTDGHVHLY_ ENSG00000119333|ENST00000372715|DYNC2I2 63.562846038646086 0.0241094678104353 2 {[SA]|[TG]}D{[HG]|PP}VH{I|L}Y 9 0 + 49.425 0.0 0.0 4.9551 4.9551 86.683 0.0 0.0 0.0 36.23741734826203 13.601292910313347 13.601292910313347 17.951826406864537 0 1.2134679910804405 1.5228787452803376 0.0 0.0 + + {[SA]|[TG]}D{[HG]|PP}VH{I|L}Y;{[SA]|[TG]}[HV][DG]H{I|L}Y;{[SA]|[TG]}D{[HG]|PP}{I|L}[HV]Y;[H{I|L}][SG][DG]H{I|L}Y;{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP]{I|L}Y 4.9551;3.1553;1.7077;1.4106;0.56492 +;-;-;-;- + 89 + 1 2.043 44330.3 1.0 1811 3283 5095 DOHH2_400M_050219_2,5096 DOHH2_400M_050219_2,5096,GTDGHVHLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5097 26.438 800.0 159190.0 25 0 11780.0 + 45459 YTETEPYHNY 10 148 658.7756771253677 1315.5368013175353 2 658.7753784060478 MULTI CID FTMS 0 0 0 5095 155956.65625 0.1307939311941743 3 -0.0757102966308593 2 Unmodified _YTETEPYHNY_ ENSG00000158545|ENST00000301011|ZC3H18;ENST00000568072.1_1_16:88666261-88675531:+|nuORF 74.19965305603844 0.0188013450058842 2 YTETEPYWNN 10 2 + 98.884 0.0 0.0 7.5166 7.5166 87.157 0.0 0.0 0.0 79.88191435886668 8.010299956639813 8.010299956639813 5.897554856604174 0 0.8703715150305282 2.0 0.9247425010840048 0.5629529932484498 YTETEPYWNN;YTETEPYHYN;YTETEPYWGGN;YTETEPYHNY;YTETEPY{[DS]|[MA]|[CV]|TT}[DP];YTETEPYHGGY;YTET{M(Oxidation (M))|F}YN{[HG]|PP}AN;YTETEPTTY[DP];YTET{[ES]|[DT]|[{I|L}C]}EWSAN;YTETEP[HN]N[DP] 7.5166;7.0683;6.82;6.5157;5.6599;5.6106;5.5492;5.5026;5.497;5.4713 -;-;-;+;-;-;-;-;-;- + 5398 + 1 2.043 95593.1 0.8600000143051147 1812 3283 5095 DOHH2_400M_050219_2,5097 DOHH2_400M_050219_2,5097,YTETEPYHNY True True YTETEPYHNY 26.438064 658.775378406048 25618662.0 5095.0 ENSG00000158545|ENST00000301011|ZC3H18;;ENST00000568072.1_1_16:88666261-88675531:+|nuORF 9.903783321380615 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5098 26.44 81.0 780060.0 25 0 113740.0 24705 MNVDLQSI 8 74 460.2324995748255 918.4504462164508 2 460.2313720583916 MULTI CID FTMS 0 0 0 5095 723563.6875 0.5881325043034139 -9 0.5898571014404297 3 Unmodified _MNVDLQSI_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 23.1484247019978 0.5573009939494978 2 [MN]PS 4 5 36.287 0.0 0.0 3.9508 0.0 0.0 0.0 486.2562655084594 486.2562655084594 7.122125304859843 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.4247425010840047 0.0 [MN]PS 3.9508 - 155 + 1 2.043 58605.9 1.0 1813 3283 5095 DOHH2_400M_050219_2,5098 DOHH2_400M_050219_2,5098,MNVDLQSI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5099 26.442 81.0 890740.0 25 0 130830.0 + 11107 GEFRNDLQ 8 78 489.7351909933759 977.4558290535518 2 489.7354003787041 MULTI CID FTMS 0 0 0 5095 560785.5625 0.2678271994884025 -4 0.2529182434082031 4 Unmodified _GEFRNDLQ_ REV__ENST00000327906.7_1_3:52445065-52445107:+|nuORF 22.736283301280096 0.5659792798204337 2 {[CA]|SS}{I|L}SD[QT]{I|L}Q 9 -1 + 51.973 0.0 0.0 5.3172 5.3172 77.124 0.0 0.0 0.0 6.478174818886373 13.455612550363796 6.478174818886373 3.0102999566398125 0 0.9247425010840048 0.0 0.2614393726401688 0.4247425010840047 {[CA]|SS}{I|L}SD[QT]{I|L}Q;{[CA]|SS}S{I|L}D[QT]{I|L}Q;{[CA]|SS}{I|L}DS[QT]{I|L}Q;{[CA]|SS}D{I|L}S[QT]{I|L}Q;{[CA]|SS}{I|L}D[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}SWRDQ;{[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}S{I|L}W[RD]Q;{[CA]|SS}D{[CP]|[EA]}[KT]{I|L}Q;{[CA]|SS}{I|L}SD[QT]Q{I|L} 5.3172;5.0092;5.0092;4.829;4.3869;4.3276;4.2068;3.771;3.2416;3.1893 -;-;-;-;-;-;-;-;-;- 349 + 1 2.043 61219.1 1.0 1814 3283 5095 DOHH2_400M_050219_2,5099 DOHH2_400M_050219_2,5099,GEFRNDLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5100 26.445 168.0 384980.0 25 0 50424.0 35377 STELDDITVT 10 84 547.2670442608832 1092.5195355885662 2 547.2671386599541 MULTI CID FTMS 0 0 0 5095 407221.9375 1.0 0 0.0 5 Unmodified _STELDDITVT_ ENSG00000174417|ENST00000518632|TRHR 30.63653989081413 0.2803493085145199 2 {[MG]|[TS]}EPNN{I|L}RY 9 6 + 60.729 0.0 0.0 5.5586 5.5586 85.624 0.0 0.0 0.0 45.49980340329462 4.929155219028942 4.929155219028942 9.208187539523747 0 0.7614393726401688 0.0 0.0 1.2302046884880935 {[MG]|[TS]}EPNN{I|L}RY;{[MG]|[TS]}EPNGG{I|L}RY;{[MG]|[TS]}EPGGN{I|L}RY;{[MG]|[TS]}EPGGGG{I|L}RY;[H{I|L}]{[CP]|[EA]}PNP[C(Carbamidomethyl (C))R];{[MG]|[TS]}E[KT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RD];{[MG]|[TS]}E[{I|L}V][QT][C(Carbamidomethyl (C))R];[H{I|L}]{[CP]|[EA]}PGGP[C(Carbamidomethyl (C))R];{[MG]|[TS]}[YG][RP]P[C(Carbamidomethyl (C))R] 5.5586;4.7157;4.7157;3.8769;1.7722;1.1686;0.99414;0.92939;0.0063511 -;-;-;-;-;-;-;-;- 253 + 1 2.043 57043.6 1.0 1815 3283 5095 DOHH2_400M_050219_2,5100 DOHH2_400M_050219_2,5100,STELDDITVT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5101 26.449 205.0 499310.0 25 0 62225.0 + 11926 GMDNDFHHY 9 119 379.1468304018813 1134.4186618058438 3 379.1468078494072 MULTI CID FTMS 0 0 0 5095 329905.59375 1.0 0 0.0 6 Unmodified _GMDNDFHHY_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 26.34127834903884 0.1960301806784604 2 D{M(Oxidation (M))|F}HHY 5 4 31.938 0.0 0.0 2.8154 0.0 0.0 417.1332037148941 0.0 417.1332037148941 0.0 13.97554090846959 0.0 0.0 0 0.0 0.0 0.0 0.0 + D{M(Oxidation (M))|F}HHY 2.8154 + + 83 + 1 2.043 84639.9 1.0 1816 3283 5095 DOHH2_400M_050219_2,5101 DOHH2_400M_050219_2,5101,GMDNDFHHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5102 26.452 171.0 519530.0 25 0 97075.0 + 9019 FDGPMLSRLQ 10 83 582.2994605245195 1162.584368115839 2 582.2997924685478 MULTI CID FTMS 0 0 0 5095 248366.828125 0.7345522452686689 -1 0.0651378631591796 7 Unmodified _FDGPMLSRLQ_ REV__nc|ENSG00000276717|A8MTI9|PRSS47P 12.240655878213236 0.6421556946785427 2 SQ 2 -1 23.711 0.0 0.0 2.0395 0.0 0.0 929.4835513207204 0.0 929.4835513207204 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 SQ 2.0395 - 25 + 1 2.043 69795.3 1.0 1817 3283 5095 DOHH2_400M_050219_2,5102 DOHH2_400M_050219_2,5102,FDGPMLSRLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5103 26.459 349.0 242940.0 25 0 26230.0 + 8039 ENKSCNDKLQ 10 98 618.2859769401326 1234.5574009470652 2 618.2863647341728 MULTI CID FTMS 0 0 0 5095 182721.875 0.6646723427145222 -3 0.2420215606689453 8 Carbamidomethyl (C) _ENKSC(Carbamidomethyl (C))NDKLQ_ ENSG00000138193|ENST00000371380|PLCE1;nc|ENSG00000138193|Q9P212-2|PLCE1 69.10491478415734 0.0189654488676922 2 {I|L}{M(Oxidation (M))|F}GD{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}{I|L}Q 9 7 53.906 0.0 0.0 4.3664 0.0 0.0 146.067467911473 0.0 146.067467911473 0.0 15.208122007288624 0.0 0.0 0 0.0 0.0 0.0 1.7786596949921218 {I|L}{M(Oxidation (M))|F}GD{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}{I|L}Q 4.3664 - 234 + 1 2.043 65935.8 1.0 1818 3283 5095 DOHH2_400M_050219_2,5103 DOHH2_400M_050219_2,5103,ENKSCNDKLQ True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5104 26.464 296.0 360920.0 25 0 38258.0 + 6791 EEALHASHGF 10 131 366.50544767443904 1096.4945136235172 3 366.5051147341728 MULTI CID FTMS 0 0 0 5095 164143.78125 0.4252389631055926 2 -0.0717391967773437 9 Unmodified _EEALHASHGF_ ENSG00000186010|ENST00000507754|NDUFA13;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13 18.1463463914782 0.5430639438673815 2 EEA{I|L}HA[HS]G{M(Oxidation (M))|F} 10 0 + 33.645 0.0 0.0 3.0684 3.0684 71.048 0.0 0.0 0.0 20.546218740408904 3.679767852945943 3.679767852945943 4.313637641589871 0 0.0 0.0 0.0 0.0 + + EEA{I|L}HA[HS]G{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}MVAH{I|L}A[HC];[{I|L}A]{[{M(Oxidation (M))|F}D]|MM}AH{I|L}A[HC];EEA{I|L}HA[HQ]Y;EEA{I|L}HA[YQ]H;{[TV]|[{I|L}S]}[WM]H{I|L}A[HC];EEA{I|L}[C(Carbamidomethyl (C))K][NS]{M(Oxidation (M))|F};EEA{I|L}[C(Carbamidomethyl (C))K][SG]G{M(Oxidation (M))|F};EEA{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{[TV]|[{I|L}S]}{M(Oxidation (M))|F};EEA{I|L}[C(Carbamidomethyl (C))K]{[QG]|[NA]}Y 3.0684;2.675;2.614;2.614;2.3688;2.365;1.6746;1.6329;1.4001;1.1785 +;-;-;-;-;-;-;-;-;- + 144 + 1 2.043 90693.5 1.0 1819 3283 5095 DOHH2_400M_050219_2,5104 DOHH2_400M_050219_2,5104,EEALHASHGF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5105 26.478 800.0 167790.0 25 0 18869.0 + -1 YSDPSTGEPATY 12 137 644.2717682400462 1286.5289835468925 2 644.2719604372978 MULTI CID FTMS 0 0 0 5095 137838.40625 0.9866314200493916 -1 0.0651378631591796 10 Carbamidomethyl (C) _TC(Carbamidomethyl (C))ECVFPPAYT_ nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;ENSG00000178209|ENST00000345136|PLEC 27.628801355627647 0.4434699450731472 2 [PS]TGEDSYPATY 12 -1 [PS]TGEDSY + + 40.935 6.9887 0.83565 3.1818 3.1818 49.236 0.0 0.0 0.0 0.0 14.402529673033817 0.0 0.0 0 1.0 0.0 1.1549471895720984 0.0 [PS]TGEDSYPATY 3.1818 - 1154 + 1 2.043 97472.4 0.6800000071525574 1820 3283 5095 DOHH2_400M_050219_2,5105 DOHH2_400M_050219_2,5105,TCECVFPPAYT False False YSDPSTGEPATY 26.477855 644.271960437298 1502958.0 5095.0 nc|ENSG00000178209|Q15149-5|PLEC;;nc|ENSG00000178209|Q15149-8|PLEC;;nc|ENSG00000178209|Q15149-6|PLEC;;nc|ENSG00000178209|Q15149|PLEC;;nc|ENSG00000178209|Q15149-9|PLEC;;nc|ENSG00000178209|Q15149-3|PLEC;;nc|ENSG00000178209|Q15149-7|PLEC;;nc|ENSG00000178209|Q15149-2|PLEC;;ENSG00000178209|ENST00000345136|PLEC 8.239929835001627 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5107 26.491 625.0 181730.0 25 0 18754.0 + 11927 GMDNDFHHY 9 138 568.2161836069301 1134.4178142806602 2 568.2159911990166 MULTI CID FTMS 0 0 0 5106 87631.609375 0.6707949899890681 -1 0.0583534240722656 1 Unmodified _GMDNDFHHY_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 57.47134341890925 0.0274820932774257 2 {[MG]|[TS]}DND{M(Oxidation (M))|F}HHY 9 0 + 62.63 0.0 0.0 5.5209 5.5209 86.657 0.0 0.0 0.0 7.147642715192504 9.777236052888476 7.147642715192504 9.777236052888476 0 0.805462187404089 0.0 0.3494850021680094 0.4247425010840047 + + {[MG]|[TS]}DND{M(Oxidation (M))|F}HHY;{[MG]|[TS]}DND{M(Oxidation (M))|F}HWN;{[MG]|[TS]}DGGD{M(Oxidation (M))|F}HHY;{[MG]|[TS]}D[C(Carbamidomethyl (C))C]{I|L}HHY;{[MG]|[TS]}DGGD{M(Oxidation (M))|F}HWN;{[MG]|[TS]}D[C(Carbamidomethyl (C))C]{I|L}HWN;{[MG]|[TS]}D[KC]SN{[MS]|[{M(Oxidation (M))|F}A]}Y;[HC][YE]{M(Oxidation (M))|F}HHY;{[MG]|[TS]}D[YC(Carbamidomethyl (C))]AQQY;{[MG]|[TS]}[WC(Carbamidomethyl (C))]SN{[MS]|[{M(Oxidation (M))|F}A]}Y 5.5209;4.659;4.3347;3.9142;3.8473;3.4267;1.9948;1.9044;1.5742;1.0834 +;-;-;-;-;-;-;-;-;- + 737 + 1 2.043 88446.3 1.0 1821 3284 5106 DOHH2_400M_050219_2,5107 DOHH2_400M_050219_2,5107,GMDNDFHHY True True GMDNDFHHY 26.491251 568.215991199017 508930.15625 5106.0 nc|ENSG00000083520|Q9Y2L1-2|DIS3;;ENSG00000083520|ENST00000377767|DIS3 9.706119855244957 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5110 26.503 264.0 352740.0 25 0 36262.0 + 25548 NESPNGYRLQ 10 98 589.283339096981 1176.5521252607618 2 589.2834960818291 MULTI CID FTMS 0 0 0 5109 197002.5 0.94332215621495 2 -0.1198291778564453 1 Unmodified _NESPNGYRLQ_ REV__ENSG00000126016|ENST00000371959|AMOT 36.506200033944 0.1944608063770638 2 {[QD]|[EN]|[WG]|[KD]|[RS]}ARQDG{M(Oxidation (M))|F}{I|L}Q 10 -1 + 64.633 0.0 0.0 5.4934 5.4934 84.264 0.0 0.0 0.0 5.998775886267367 44.19745370329062 5.998775886267367 9.164539485499247 0 1.6549471895720984 0.0 0.2887254899964357 0.3494850021680094 {[QD]|[EN]|[WG]|[KD]|[RS]}ARQDG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}A[VG]QDG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}AR[AG]DG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}AR{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}AR[W{M(Oxidation (M))|F}]N{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}A[VG][AG]DG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}A[VG]{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}A[VG][W{M(Oxidation (M))|F}]N{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}AR[W{M(Oxidation (M))|F}]GG{I|L}Q;[RD][QA]QDG{M(Oxidation (M))|F}{I|L}Q 5.4934;4.7145;4.7145;4.4855;4.4855;3.9386;3.7029;3.7029;3.7029;3.3583 -;-;-;-;-;-;-;-;-;- 519 1 2.043 73311.8 1.0 1822 3286 5109 DOHH2_400M_050219_2,5110 DOHH2_400M_050219_2,5110,NESPNGYRLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5111 26.509 326.0 328470.0 25 0 23394.0 + 24552 MLDHQPPQY 9 124 564.7601723857739 1127.5057918383477 2 564.7608520388603 MULTI CID FTMS 0 0 0 5109 207114.3125 0.0680242034147695 -4 0.140848159790039 2 Unmodified _MLDHQPPQY_ ENSG00000108604|ENST00000448276|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;nc|ENSG00000108604|Q92925-3|SMARCD2 78.7280429016045 0.0178249292250809 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]QPPQY 9 0 + 64.353 0.0 0.0 5.7076 5.7076 76.555 0.0 0.0 0.0 1.3375348076015854 1.3375348076015854 1.3375348076015854 1.3375348076015854 0 1.1861818737241734 2.0 0.5501648626366046 0.2887254899964357 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]QPPQY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HK]DPPQY;[AG]DH{I|L}MPPQY;{[QD]|[EN]|[WG]|[KD]|[RS]}H{I|L}MPPQY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{[QV]|[N{I|L}]|[RA]|[KV]}SPQY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y[WK]PQY;[AG]HD{I|L}MPPQY;[HQ]D{I|L}MPPQY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]QPP[AG]Y;[HD]Q{I|L}MPPQY 5.7076;5.589;5.205;5.1488;5.0347;4.9941;4.9895;4.9332;4.8909;4.7591 +;-;-;-;-;-;-;-;-;- + 1576 1 2.043 87019.3 1.0 1823 3286 5109 DOHH2_400M_050219_2,5111 DOHH2_400M_050219_2,5111,MLDHQPPQY True True MLDHQPPQY 26.50853 564.76085203886 34942296.0 5109.0 ENSG00000108604|ENST00000448276|SMARCD2;;nc|ENSG00000108604|Q92925-2|SMARCD2;;nc|ENSG00000108604|Q92925-3|SMARCD2 8.592512448628744 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5112 26.522 800.0 302170.0 25 0 60561.0 + 780 AESGDSVKMY 10 176 543.7416668698759 1085.4687808065516 2 543.7424804568291 MULTI CID FTMS 0 0 0 5109 120473.6875 0.7331170584023134 -1 0.0039710998535156 3 Unmodified _AESGDSVKMY_ ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4 37.07464296494664 0.1884581770199685 2 {[CP]|[EA]}SGDSVKMY 10 0 + 57.063 0.0 0.0 5.257 5.257 85.893 0.0 0.0 0.0 2.4831055378960087 10.32528301678009 2.4831055378960087 10.32528301678009 0 1.1237125054200234 0.0 0.0 0.3252574989159953 + + {[CP]|[EA]}SGDSVKMY;[TA]DASKMEAY;{[CP]|[EA]}SASKMEAY;{[CP]|[EA]}SGD[KA]V{M(Oxidation (M))|F}Y;{[CP]|[EA]}SGDSVK{M(Oxidation (M))|F}{M(Oxidation (M))|F};[TA]ADSKMEAY;[SG]DSVKMEAY;{[CP]|[EA]}SG[WK]V{M(Oxidation (M))|F}Y;[TA]DAS[Q{I|L}]{M(Oxidation (M))|F}AY;{[CP]|[EA]}SAS[Q{I|L}]{M(Oxidation (M))|F}AY 5.257;4.3057;4.2649;3.8603;3.7564;3.5207;3.3313;3.2585;3.0661;3.0253 +;-;-;-;-;-;-;-;-;- + 3074 + 1 2.043 186496.3 0.7599999904632568 1824 3286 5109 DOHH2_400M_050219_2,5112 DOHH2_400M_050219_2,5112,AESGDSVKMY False True AESGDSVKMY 26.522363 543.742480456829 797563.375 5109.0 nc|ENSG00000156304|O95104-3|SCAF4;;ENSG00000156304|ENST00000286835|SCAF4;;nc|ENSG00000156304|O95104-2|SCAF4;;ENST00000467731.1_1_21:33057290-33073360:-|nuORF 6.897740205128987 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5113 26.536 800.0 223320.0 25 0 14969.0 -1 0 180 578.3382341231647 577.3309576565647 1 578.3382446169853 MULTI CID FTMS 0 0 0 5109 189562.671875 0.455510291587147 -8 0.3949775695800781 4 2 Y 1 -1 11.99 0.0 0.0 2.0767 0.0 0.0 396.25653856652406 0.0 396.25653856652406 0.0 3.621379348003945 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.0767 - 137 + 1 2.043 136104.1 0.9300000071525574 1825 3286 5109 DOHH2_400M_050219_2,5113 DOHH2_400M_050219_2,5113, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5114 26.55 800.0 179210.0 25 0 56497.0 34339 SLSLSPGTHL 10 133 506.2784282297167 0 506.2777892947197 PEAK CID FTMS 0 0 0 5109 114004.65625 0.5667435187959926 -10 0.55126953125 5 Unmodified _SLSLSPGTHL_ ENSG00000161996|ENST00000293879|WDR90;ENST00000547407.5_1_16:712941-717586:+|nuORF;ENST00000549024.5_1_16:711101-717586:+|nuORF;ENST00000553080.1_1_16:716564-717586:+|nuORF;nc|ENSG00000161996|Q96KV7-7|WDR90 10.073929032068715 0.3742530088597855 2 SD 2 9 7.9588 0.0 0.0 0.78758 0.0 0.0 723.3941539674429 82.06689630679921 805.4610502742421 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SD 0.78758 - 34 + 1 2.043 113775.4 0.699999988079071 1826 3286 5109 DOHH2_400M_050219_2,5114 DOHH2_400M_050219_2,5114,SLSLSPGTHL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5115 26.564 800.0 166000.0 25 0 11487.0 + + 10861 DQKERDVIM 9 155 567.2815874905259 1132.5486220478515 2 567.2810546755791 MULTI CID FTMS 0 0 0 5109 117610.84375 0.6689326139013072 -1 0.0039710998535156 6 Unmodified _GADWWRVLM_ nc|ENSG00000156976|Q14240-2|EIF4A2;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;ENSG00000156976|ENST00000323963|EIF4A2;ENST00000485101.5_1_3:186505247-186505556:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000461021.1_1_3:186505247-186505672:+|nuORF;ENST00000494445.1_1_3:186505247-186506105:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581808.1_1_17:7481021-7481457:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENSG00000161960|ENST00000293831|EIF4A1;nc|ENSG00000161960|P60842-2|EIF4A1;ENST00000578324.5_1_17:7477602-7481249:+|nuORF 17.11289562659939 0.3734572693229295 2 [YV]V{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}V[TA]M 10 -1 + 37.949 0.0 0.0 3.3508 3.3508 66.756 0.0 0.0 0.0 0.511517017707618 0.511517017707618 0.511517017707618 0.511517017707618 0 0.6549471895720984 0.0 0.3494850021680094 0.0 [YV]V{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}V[TA]M;{[SA]|[TG]}YV{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}V{I|L}M;[YV][R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}V[TA]M;{[SA]|[TG]}YV{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]{I|L}M;{[TV]|[{I|L}S]}[YG]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}V{I|L}M;[YV]V{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{[SA]|[TG]}{I|L}M;[YV]V{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}VC{[TV]|[{I|L}S]};[YV]{[SA]|[TG]}{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}V{I|L}M;{[QV]|[N{I|L}]|[RA]|[KV]}P{[QD]|[EN]|[WG]|[KD]|[RS]}{[CT]|[{M(Oxidation (M))|F}G]}V{I|L}M;{[TV]|[{I|L}S]}[YG]{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]{I|L}M 3.3508;3.3056;2.774;2.7288;2.4593;2.394;2.3881;2.3112;2.1208;1.8825 -;-;-;-;-;-;-;-;-;- 1019 + 1 2.043 104737.7 0.7599999904632568 1827 3286 5109 DOHH2_400M_050219_2,5115 DOHH2_400M_050219_2,5115,GADWWRVLM False False DQKERDVIM 26.563838 567.281054675579 740798.0625 5109.0 nc|ENSG00000156976|Q14240-2|EIF4A2;;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;;ENSG00000156976|ENST00000323963|EIF4A2;;ENST00000485101.5_1_3:186505247-186505556:+|nuORF;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;ENST00000461021.1_1_3:186505247-186505672:+|nuORF;;ENST00000494445.1_1_3:186505247-186506105:+|nuORF;;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;;ENST00000581808.1_1_17:7481021-7481457:+|nuORF;;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF 4.084508736928304 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5117 26.57 125.0 494870.0 25 0 69106.0 + 32709 SEAGPNQTF 9 88 475.71431196916274 949.4140710051256 2 475.7140685915947 MULTI CID FTMS 0 0 0 5116 265996.96875 0.3510644484463901 4 -0.194223403930664 1 Unmodified _SEAGPNQTF_ ENSG00000163565|ENST00000295809|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16 21.74664581756881 0.2544899275067181 2 T{M(Oxidation (M))|F} 2 7 22.078 0.0 0.0 2.3255 0.0 0.0 683.2873447861787 0.0 683.2873447861787 0.0 11.240888441693526 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 + T{M(Oxidation (M))|F} 2.3255 + + 128 + 1 2.034 55106.6 1.0 1828 3287 5116 DOHH2_400M_050219_2,5117 DOHH2_400M_050219_2,5117,SEAGPNQTF False True SEAGPNQTF 26.570015 475.714068591595 10173454.0 5116.0 ENST00000493884.5_1_1:158984458-159022017:+|nuORF;;nc|ENSG00000163565|Q16666-2|IFI16;;nc|ENSG00000163565|Q16666-6|IFI16;;nc|ENSG00000163565|Q16666-8|IFI16;;nc|ENSG00000163565|Q16666-3|IFI16;;ENSG00000163565|ENST00000295809|IFI16 5.084816773732503 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5118 26.584 800.0 77128.0 25 0 30824.0 20946 LNGAPKGG 8 48 713.3948738067779 712.3875973401779 1 713.3932983279228 MULTI CID FTMS 0 0 0 5116 26596.296875 0.2044024086673212 4 -0.194223403930664 2 Unmodified _LNGAPKGG_ ENSG00000020181|ENST00000412232|ADGRA2;nc|ENSG00000020181|Q96PE1-2|ADGRA2 0.6903765706972694 0.8201419426409876 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.034 50868.5 0.5699999928474426 1829 3287 5116 DOHH2_400M_050219_2,5118 DOHH2_400M_050219_2,5118,LNGAPKGG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5119 26.589 267.0 467790.0 25 0 55057.0 + 26054 NMPKKPVL 8 108 463.7776886387092 925.5408243442184 2 463.7780029177666 MULTI CID FTMS 0 0 0 5116 242838.625 0.0789665690906111 -4 0.144134521484375 3 Unmodified _NMPKKPVL_ ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2 38.15118350030904 0.2652218139009398 2 NMPKKPV{I|L} 8 0 + 62.798 0.0 0.0 6.785 6.785 95.483 0.0 0.0 0.0 50.03388037522974 8.557843073476583 8.557843073476583 62.798090218518645 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + NMPKKPV{I|L} 6.785 + + 136 + 1 2.034 98206.2 1.0 1830 3287 5116 DOHH2_400M_050219_2,5119 DOHH2_400M_050219_2,5119,NMPKKPVL False True NMPKKPVL 26.588769 463.778002917767 31822824.0 5116.0 nc|ENSG00000136108|Q8WWK9-4|CKAP2;;nc|ENSG00000136108|Q8WWK9-6|CKAP2;;ENSG00000136108|ENST00000258607|CKAP2;;nc|ENSG00000136108|Q8WWK9|CKAP2 5.226630051930745 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5120 26.599 604.0 304130.0 25 0 18853.0 + 26031 NMEADPGQY 9 158 512.7052738192958 1023.3959947053916 2 512.7051269412041 MULTI CID FTMS 0 0 0 5116 194021.140625 0.5254913841668281 -1 0.0684242248535156 4 Unmodified _NMEADPGQY_ ENSG00000172270|ENST00000333511|BSG;nc|ENSG00000172270|P35613-2|BSG;nc|ENSG00000172270|P35613-3|BSG;nc|ENSG00000172270|P35613-4|BSG 86.33184430468982 0.0159826143231117 2 [MN]EADPGQY 9 0 + 71.698 0.0 0.0 7.0059 7.0059 93.902 0.0 0.0 0.0 18.45098040014257 11.0827208845118 11.0827208845118 18.45098040014257 0 1.5253187046026266 1.5228787452803376 0.5189301784845296 0.91944517631652 + + [MN]EADPGQY;[MD]QADPGQY;[AG][MD]ADPGQY;[TP][C(Carbamidomethyl (C))S]DPGQY;[MD][AG]ADPGQY;[PS][CS]ADPGQY;{[CP]|[EA]}{[CA]|SS}ADPGQY;[TP][C(Carbamidomethyl (C))S]DPQGY;[MD]{[CP]|[EA]}NPGQY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NS]DPGQY 7.0059;5.203;4.4027;3.7434;3.7226;2.7643;2.7218;2.613;2.5653;2.4771 +;-;-;-;-;-;-;-;-;- + 599 1 2.034 145802.3 1.0 1831 3287 5116 DOHH2_400M_050219_2,5120 DOHH2_400M_050219_2,5120,NMEADPGQY True True NMEADPGQY 26.599338 512.705126941204 1674472.0 5116.0 nc|ENSG00000172270|P35613-4|BSG;;ENSG00000172270|ENST00000333511|BSG;;nc|ENSG00000172270|P35613-3|BSG;;nc|ENSG00000172270|P35613-2|BSG 7.379350344340007 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5121 26.603 185.0 428000.0 25 0 34354.0 28396 PSPHGLAG 8 99 368.19253861300473 734.3705242928095 2 368.1920043826103 MULTI CID FTMS 0 0 0 5116 187002.375 0.3054056730016444 -4 0.144134521484375 5 Unmodified _PSPHGLAG_ ENST00000300976.8_1_19:18780088-18780439:+|nuORF 9.347437153973935 0.7675937258251505 2 {[CA]|SS}{I|L}{[MG]|[TS]}{I|L}Q 7 5 + 42.228 0.0 0.0 5.7503 5.7503 90.983 0.0 0.0 0.0 10.590088361946428 13.137728966894713 10.590088361946428 27.15636652493138 0 0.9247425010840048 0.7958800173440752 0.0 0.3807196863200844 {[CA]|SS}{I|L}{[MG]|[TS]}{I|L}Q;{[CA]|SS}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}R;{[CA]|SS}{I|L}{[MG]|[TS]}AAV 5.7503;2.0523;1.2475 -;-;- 36 + 1 2.034 67341.9 1.0 1832 3287 5116 DOHH2_400M_050219_2,5121 DOHH2_400M_050219_2,5121,PSPHGLAG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5122 26.607 193.0 380790.0 25 0 71538.0 -1 0 101 499.2987653015368 498.2914888349368 1 499.2938110232353 MULTI CID FTMS 0 0 0 5116 133941.609375 1.0 0 0.0 6 2 [H{I|L}]Y 3 -1 14.705 0.0 0.0 2.9511 0.0 0.0 0.0 82.06688867740468 82.06688867740468 0.0122623118827664 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [H{I|L}]Y 2.9511 - 19 + 1 2.034 61346.8 1.0 1833 3287 5116 DOHH2_400M_050219_2,5122 DOHH2_400M_050219_2,5122, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5123 26.611 236.0 341400.0 25 0 49152.0 + -1 SRCKLFRP 8 123 532.295173190789 0 532.2950927615166 PEAK CID FTMS 0 0 0 5116 200335.03125 0.8112176633725359 9 -0.5289554595947266 7 Carbamidomethyl (C) _SRC(Carbamidomethyl (C))KLFRP_ REV__ENST00000608796.5_1_9:131051046-131051265:+|nuORF 18.13498045792455 0.4501116112875982 2 MSTN 4 -1 13.487 0.0 0.0 1.2693 0.0 0.0 188.14242409026184 438.2475069635376 626.3899310537994 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MSTN 1.2693 - 100 + 1 2.034 66799.9 1.0 1834 3287 5116 DOHH2_400M_050219_2,5123 DOHH2_400M_050219_2,5123,SRCKLFRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5124 26.615 228.0 249560.0 25 0 61513.0 + 6802 EEAPSQQGF 9 95 496.71938480125095 991.424216669302 2 496.7193481326103 MULTI CID FTMS 0 0 0 5116 166696.125 1.0 0 0.0 8 Unmodified _EEAPSQQGF_ ENSG00000188785|ENST00000336128|ZNF548;nc|ENSG00000188785|Q8NEK5|ZNF548 18.13498045792455 0.3457906370836843 2 Q{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 7 20.177 0.0 0.0 2.0352 0.0 0.0 551.2244924034801 0.0 551.2244924034801 0.0 -0.4698372174895127 -0.4698372174895127 0.0 0 0.0 0.0 0.0 0.0 Q{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.0352 - 130 + 1 2.034 49828.7 1.0 1835 3287 5116 DOHH2_400M_050219_2,5124 DOHH2_400M_050219_2,5124,EEAPSQQGF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5126 26.62 107.0 470580.0 25 0 26880.0 + 26600 NVPWTRTI 8 94 493.7726763532853 985.5307997733704 2 493.7719299197197 MULTI CID FTMS 0 0 0 5125 652741.0625 0.0284516007344732 7 -0.4299602508544922 1 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 25.399314129420983 0.5099049743284904 2 {[QN]|[E{I|L}]|[KN]}S[RP]GNT{I|L} 9 -1 + 57.105 0.0 0.0 5.7943 5.7943 86.683 0.0 0.0 0.0 9.665762445130497 16.478174818886373 9.665762445130497 9.208187539523747 0 1.2302046884880935 1.5228787452803376 0.0 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}S[RP]GNT{I|L};{[QN]|[E{I|L}]|[KN]}S[RP]GGGT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GNT{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}[RP]GNT{I|L};{[NV]|[RG]}R[NG]VNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GGGT{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}[RP]GGGT{I|L};{[NV]|[RG]}R[NG]VGGT{I|L};{[QN]|[E{I|L}]|[KN]}RR[NG]E{I|L};{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}[Q{I|L}]E{I|L} 5.7943;4.86;4.8135;4.087;3.956;3.8792;3.1527;3.0217;2.1692;1.9905 -;-;-;-;-;-;-;-;-;- 313 1 2.034 45762.7 1.0 1836 3288 5125 DOHH2_400M_050219_2,5126 DOHH2_400M_050219_2,5126,NVPWTRTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5127 26.622 133.0 455800.0 25 0 44941.0 + 6382 DWAKLIKRL 9 91 381.5740887492665 1141.7004368479995 3 381.5736572146416 MULTI CID FTMS 0 0 0 5125 230213.203125 0.015896309742132 12 -0.8173828125 2 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 2.282774691075616 0.8349936567342158 2 K{I|L}K[QP]E 6 -1 23.645 0.0 0.0 2.071 0.0 0.0 400.27961928535314 0.0 400.27961928535314 0.0 10.880952688561967 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.071 - 35 1 2.034 54592.5 1.0 1837 3288 5125 DOHH2_400M_050219_2,5127 DOHH2_400M_050219_2,5127,DWAKLIKRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5129 26.627 7.9 6542700.0 25 0 903480.0 + 6806 EEAPSRPAL 9 66 485.2535555767599 968.4925582203198 2 485.2532226443291 MULTI CID FTMS 0 0 0 5128 7573953.0 0.8278987430049282 2 -0.1356773376464843 1 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 49.93300154707207 0.0405168250806675 2 EEAPSR[PA]{I|L} 9 0 + 55.741 0.0 0.0 5.7554 5.7554 91.965 0.0 0.0 0.0 31.38235311828624 2.05136871872881 2.05136871872881 55.74085316798076 0 0.6861818737241735 1.6989700043360187 0.3807196863200844 0.0 + + EEAPSR[PA]{I|L} 5.7554 + + 83 + 1 2.034 45675.7 1.0 1838 3289 5128 DOHH2_400M_050219_2,5129 DOHH2_400M_050219_2,5129,EEAPSRPAL True True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 5130 26.641 800.0 138530.0 25 0 6290.2 -1 QNVHEERMEN 10 135 651.2785153178827 1300.5424777025653 2 651.2780639529228 MULTI CID FTMS 0 0 0 5128 105004.9921875 0.8256040950964704 1 -0.0670146942138671 2 Oxidation (M) _QNVHEERM(Oxidation (M))EN_ ENSG00000181433|ENST00000370709|SAGE1 16.149105407346934 0.5765757077271437 2 {[QG]|[NA]}GHDEAQAGNA{M(Oxidation (M))|F} 13 -1 + 114.68 0.0 0.0 8.8178 8.8178 84.573 0.0 0.0 0.0 2.2062251842807967 16.642078980768062 2.2062251842807967 2.2062251842807967 0 0.8494850021680094 1.0969100130080565 0.5994850021680094 1.5233623702246373 {[QG]|[NA]}GHDEAQAGNA{M(Oxidation (M))|F};[AG]NHDEAQAGNA{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQAGAN{M(Oxidation (M))|F};[AG]GGHDEAQAGNA{M(Oxidation (M))|F};[AG]NHDEAQAGAN{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQQNA{M(Oxidation (M))|F};[AG]NHDEAQQNA{M(Oxidation (M))|F};[AG]GGHDEAQAGAN{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQAGGGA{M(Oxidation (M))|F};{[QG]|[NA]}GHDEA[AG]AGNA{M(Oxidation (M))|F} 8.8178;8.6481;8.5088;8.4386;8.3391;8.307;8.1374;8.1296;8.1202;8.1202 -;-;-;-;-;-;-;-;-;- 20552 1 2.034 87267.5 0.7099999785423279 1839 3289 5128 DOHH2_400M_050219_2,5130 DOHH2_400M_050219_2,5130,QNVHEERMEN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5131 26.644 142.0 440930.0 25 0 53420.0 + + 24507 MIMTKRNL 8 63 503.77982252440427 1005.5450921156086 2 503.7796813845634 MULTI CID FTMS 0 0 0 5128 282685.21875 0.9530375023178194 -1 0.00714111328125 3 Unmodified _MIMKVRQT_ ENST00000487151.1_1_3:40352488-40352533:+|nuORF 30.63653989081413 0.3996269429323407 2 M{I|L}MKT[RN]{I|L} 8 -1 + 70.977 0.0 0.0 7.0586 7.0586 83.083 0.0 0.0 0.0 57.164715354569495 2.650615717986412 2.650615717986412 3.0102999566398125 0 0.8494850021680094 2.0 0.2396518287104437 0.7134679910804405 M{I|L}MKT[RN]{I|L};{I|L}MMKT[RN]{I|L};M{I|L}MTK[RN]{I|L};{I|L}MMTK[RN]{I|L} 7.0586;6.7592;5.8113;5.512 -;-;-;- 143 + 1 2.034 52591.8 1.0 1840 3289 5128 DOHH2_400M_050219_2,5131 DOHH2_400M_050219_2,5131,MIMKVRQT False False MIMTKRNL 26.643592 503.779681384563 1275137.625 5128.0 ENST00000487151.1_1_3:40352488-40352533:+|nuORF 4.086686452229817 2.0 False 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 5132 26.649 311.0 279860.0 25 0 25723.0 + 32872 SEIEAKVRY 9 114 547.7951897455176 0 547.7944213747978 PEAK CID FTMS 0 0 0 5128 144655.75 0.917048251386597 1 -0.0670146942138671 4 Unmodified _SEIEAKVRY_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 47.74868867922204 0.0378261468855112 2 {I|L}EAKVR 6 3 43.621 0.0 0.0 3.9888 0.0 0.0 216.07407626854769 178.05124841861564 394.12532468716336 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3494850021680094 0.5 + {I|L}EAKVR 3.9888 + + 147 + 1 2.034 70526.0 1.0 1841 3289 5128 DOHH2_400M_050219_2,5132 DOHH2_400M_050219_2,5132,SEIEAKVRY True True SEIEAKVRY 26.649271 547.794421374798 1021980.5 5128.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 5.333752632141113 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5133 26.663 800.0 154360.0 25 0 8621.7 + 5394 DLKRQNAVL 9 142 528.8115777009447 1055.6086024686892 2 528.8110839724541 MULTI CID FTMS 0 0 0 5128 118474.0 1.0 0 0.0 5 Unmodified _DLKRQNAVL_ ENSG00000029725|ENST00000537505|RABEP1;ENST00000575475.2_1_17:5185712-5281605:+|nuORF;nc|ENSG00000029725|Q15276-2|RABEP1 45.69961567697781 0.0497987121815769 2 {NN|[MP]|[D{I|L}]|[EV]}[{I|L}A][KG]VEV{I|L} 10 6 + 63.592 0.0 0.0 6.0242 6.0242 85.645 0.0 0.0 0.0 22.005369237630177 29.6310689291954 22.005369237630177 8.57840941039747 0 0.9802046884880936 2.0 0.1989700043360188 1.5356668758921828 {NN|[MP]|[D{I|L}]|[EV]}[{I|L}A][KG]VEV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A][KG]{I|L}DV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A][VG]KEV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A][WR]AV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]D{[QV]|[N{I|L}]|[RA]|[KV]}AV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A][VG]WAV{I|L};{[QN]|[E{I|L}]|[KN]}{[VA]|[{I|L}G]}[KG]VEV{I|L};{[QN]|[E{I|L}]|[KN]}[KT]PKEV{I|L};{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}[KG]VEV{I|L};[{I|L}T][TP][KG]VEV{I|L} 6.0242;5.2116;4.6745;4.1904;4.0086;3.8619;3.8431;3.6715;3.5937;3.0426 -;-;-;-;-;-;-;-;-;- 1155 1 2.034 100237.3 0.6600000262260437 1842 3289 5128 DOHH2_400M_050219_2,5133 DOHH2_400M_050219_2,5133,DLKRQNAVL True True DLKRQNAVL 26.663119 528.811083972454 539277.9375 5128.0 nc|ENSG00000029725|Q15276-2|RABEP1;;ENSG00000029725|ENST00000537505|RABEP1;;ENST00000575475.2_1_17:5185712-5281605:+|nuORF 4.214900970458984 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5134 26.668 282.0 209040.0 25 0 13823.0 + 2159 AQAASQHVF 9 103 479.7402748090946 0 479.7404357790947 PEAK CID FTMS 0 0 0 5128 98115.375 0.6886576931323235 -1 0.00714111328125 6 Unmodified _AQAASQHVF_ ENSG00000077348|ENST00000221233|EXOSC5 29.081581746732265 0.1187435359889091 2 AAH 3 6 26.682 0.0 0.0 2.7868 0.0 0.0 199.0942448312768 476.2079256647094 675.3021704959862 0.0 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.0 AAH 2.7868 - 118 + 1 2.034 48503.8 1.0 1843 3289 5128 DOHH2_400M_050219_2,5134 DOHH2_400M_050219_2,5134,AQAASQHVF True True AQAASQHVF 26.668302 479.740435779095 846553.625 5128.0 ENSG00000077348|ENST00000221233|EXOSC5 7.093414783477783 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5135 26.676 403.0 336740.0 25 0 24894.0 + 32871 SEIEAKVRY 9 165 365.5326888955506 1093.576237286852 3 365.5326415896416 MULTI CID FTMS 0 0 0 5128 99252.5703125 1.0 0 0.0 7 Unmodified _SEIEAKVRY_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 29.081581746732265 0.1611639662936252 2 KAESHS 6 8 32.312 0.0 0.0 2.9547 0.0 0.0 436.2449624401533 0.0 436.2449624401533 0.0 19.5480059337616 0.0 0.0 0 0.3182503180159344 0.0 0.5 0.3494850021680094 KAESHS 2.9547 - 214 1 2.034 108666.0 1.0 1844 3289 5128 DOHH2_400M_050219_2,5135 DOHH2_400M_050219_2,5135,SEIEAKVRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5136 26.689 800.0 49864.0 25 0 12319.0 -1 0 41 1190.4913361684105 3568.4521791054312 3 1191.163867175579 MULTI CID FTMS 0 0 0 5128 132835.859375 0.844436297343066 1 -0.0670146942138671 8 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.19587 0.0 0.0 1999.6767407282807 1418.6945284479127 3418.371269176193 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19587 - 2 + 1 2.034 43437.2 0.4799999892711639 1845 3289 5128 DOHH2_400M_050219_2,5136 DOHH2_400M_050219_2,5136, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5138 26.707 800.0 49046.0 25 0 2320.7 -1 0 55 877.2030183632634 4380.978709483316 5 877.4056274294853 MULTI CID FTMS 0 0 0 5137 15173.1494140625 0.1873951840202192 1 -0.0686626434326171 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.027 36225.4 0.5400000214576721 1846 3290 5137 DOHH2_400M_050219_2,5138 DOHH2_400M_050219_2,5138, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5139 26.71 190.0 473430.0 25 0 59671.0 + 32908 SEIPQTERM 9 90 545.7635852987543 1089.5126176643084 2 545.7633544802666 MULTI CID FTMS 0 0 0 5137 249421.65625 0.4434453480839299 -2 0.0741558074951171 2 Unmodified _SEIPQTERM_ ENSG00000205323|ENST00000336133|SARNP;ENST00000552207.1_1_12:56188062-56211500:-|nuORF 24.99096001346401 0.2132109383330889 2 {[ES]|[DT]|[{I|L}C]}{I|L}PQ{[ET]|[MV]}{[WT]|[RM]} 9 0 + 36.188 0.0 0.0 3.3215 3.3215 72.125 0.0 0.0 0.0 25.07901543333617 2.4202997895334093 2.4202997895334093 4.77121254719663 0 0.8807196863200843 0.0 0.0 0.4247425010840047 + + {[ES]|[DT]|[{I|L}C]}{I|L}PQ{[ET]|[MV]}{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}{I|L}PQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ES]|[DT]|[{I|L}C]}{I|L}PQ[QT][C(Carbamidomethyl (C))K];{[ES]|[DT]|[{I|L}C]}{I|L}P[AG]{[ET]|[MV]}{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}{I|L}MH[KA]Q{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}{[QS]|[NT]}[RN]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ES]|[DT]|[{I|L}C]}{I|L}P[AG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ES]|[DT]|[{I|L}C]}{I|L}P[AG][QT][C(Carbamidomethyl (C))K];{[ES]|[DT]|[{I|L}C]}{I|L}MH[KA][AG]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}VV{I|L}H{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3.3215;2.8836;2.68;2.4763;2.4445;2.2432;2.0384;1.8348;1.2095;0.99866 +;-;-;-;-;-;-;-;-;- + 260 + 1 2.027 72489.2 1.0 1847 3290 5137 DOHH2_400M_050219_2,5139 DOHH2_400M_050219_2,5139,SEIPQTERM False True SEIPQTERM 26.710489 545.763354480267 3894303.75 5137.0 ENSG00000205323|ENST00000336133|SARNP;;ENST00000552207.1_1_12:56188062-56211500:-|nuORF 4.115797678629558 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5140 26.713 131.0 463830.0 25 0 38872.0 + 6940 EEGLVNNKY 9 92 533.2641001238096 1064.5136473144191 2 533.2642089724541 MULTI CID FTMS 0 0 0 5137 239021.25 0.4666781007279787 -1 0.0670146942138671 3 Unmodified _EEGLVNNKY_ ENSG00000134987|ENST00000513710|WDR36;nc|ENSG00000134987|Q8NI36|WDR36 67.34385681178166 0.0221257235307089 2 EE{[VA]|[{I|L}G]}VNNKY 9 0 + 61.643 0.0 0.0 5.7907 5.7907 86.657 0.0 0.0 0.0 48.71141926002071 14.973024840566469 14.973024840566469 9.208187539523747 0 0.3054621874040891 1.6989700043360187 0.0 1.3516784832448856 + + EE{[VA]|[{I|L}G]}VNNKY;EE{[VA]|[{I|L}G]}VNGGKY;EE{[VA]|[{I|L}G]}VGGNKY;[QP][TP]NV{[VA]|[{I|L}G]}[HC];[QP]N[TP]V{[VA]|[{I|L}G]}[HC];EE[YV]V{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KQ][HS]KY;EEKK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};EE[YV][R{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[QP][TP]N[R{I|L}][HC] 5.7907;4.9257;4.9257;1.307;1.185;1.1395;0.99903;0.8766;0.81371;0.29438 +;-;-;-;-;-;-;-;-;- + 286 + 1 2.027 54039.2 1.0 1848 3290 5137 DOHH2_400M_050219_2,5140 DOHH2_400M_050219_2,5140,EEGLVNNKY True True EEGLVNNKY 26.713162 533.264208972454 2780313.75 5137.0 nc|ENSG00000134987|Q8NI36|WDR36;;ENSG00000134987|ENST00000513710|WDR36 7.221598466237386 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5141 26.719 346.0 364970.0 25 0 23106.0 + 517 AEHLGDFHRTY 11 111 449.2142100308666 1344.6208006927998 3 449.2136718630791 MULTI CID FTMS 0 0 0 5137 188804.09375 0.8385979023708935 -1 0.0670146942138671 4 Unmodified _AEHLGDFHRTY_ ENSG00000125818|ENST00000335877|PSMF1 30.41366949970193 0.3780803821168328 2 [H{I|L}]{[MG]|[TS]}H{M(Oxidation (M))|F}DG{I|L}H 10 8 53.338 0.0 0.0 3.9667 0.0 0.0 0.0 197.0566891875448 197.0566891875448 39.84280191809303 0.0 0.0 0.0 0 1.0941876774005248 1.6989700043360187 0.0 0.0 [H{I|L}]{[MG]|[TS]}H{M(Oxidation (M))|F}DG{I|L}H 3.9667 - 898 1 2.027 104380.2 1.0 1849 3290 5137 DOHH2_400M_050219_2,5141 DOHH2_400M_050219_2,5141,AEHLGDFHRTY False True AEHLGDFHRTY 26.7194 449.213671863079 1105226.625 5137.0 ENSG00000125818|ENST00000335877|PSMF1 7.474360624949138 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5142 26.733 800.0 318160.0 25 0 24260.0 + 31754 RSDPGGGGLAY 11 149 525.253555468426 1048.492558003652 2 525.2531005740166 MULTI CID FTMS 0 0 0 5137 183694.921875 0.0548652547731963 -3 0.1255607604980468 5 Unmodified _RSDPGGGGLAY_ ENSG00000183496|ENST00000329713|MEX3B;ENST00000558133.1_1_15:82335503-82336997:-|nuORF 22.774965066869 0.5574395181959457 2 A{I|L}GT{[YC]|[HE]}{I|L}Q 8 9 52.631 0.0 0.0 5.0197 0.0 0.0 181.07324646010107 0.0 181.07324646010107 0.0 35.64117228912984 0.0 0.0 0 1.7614393726401687 0.0 0.2614393726401688 0.6307196863200843 A{I|L}GT{[YC]|[HE]}{I|L}Q 5.0197 - 904 + 1 2.027 195217.5 0.7699999809265137 1850 3290 5137 DOHH2_400M_050219_2,5142 DOHH2_400M_050219_2,5142,RSDPGGGGLAY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5143 26.747 800.0 147590.0 25 0 10098.0 -1 SSEVDWCEDNY 11 118 702.2579979824167 1402.5014430316332 2 702.2576171755791 MULTI CID FTMS 0 0 0 5137 123465.609375 0.4741910372373655 -1 0.0670146942138671 6 Carbamidomethyl (C) _SSEVDWC(Carbamidomethyl (C))EDNY_ ENSG00000177076|ENST00000340967|ACER2 5.731851221503515 0.8481046878870278 2 [QP]TY 4 -1 25.878 0.0 0.0 1.8452 0.0 0.0 0.0 910.2551105943865 910.2551105943865 4.151603310239906 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.3252574989159953 0.5994850021680094 [QP]TY 1.8452 - 400 1 2.027 88535.4 0.6800000071525574 1851 3290 5137 DOHH2_400M_050219_2,5143 DOHH2_400M_050219_2,5143,SSEVDWCEDNY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5144 26.753 315.0 231230.0 25 0 23341.0 + 10574 FVIKKHEL 8 104 507.3097318745983 1012.6049108159966 2 507.3096191287041 MULTI CID FTMS 0 0 0 5137 111238.5859375 1.0 0 0.0 7 Unmodified _FVIKKHEL_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 30.63653989081413 0.3996269429323407 2 {M(Oxidation (M))|F}{I|L}VE 4 5 30.79 0.0 0.0 3.0406 0.0 0.0 506.3082447736344 0.0 506.3082447736344 0.0 17.294869019082952 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}VE 3.0406 - 163 1 2.027 62822.9 1.0 1852 3290 5137 DOHH2_400M_050219_2,5144 DOHH2_400M_050219_2,5144,FVIKKHEL False True FVIKKHEL 26.752802 507.309619128704 499901.75 5137.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 1.718555112679799 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5145 26.758 283.0 864770.0 25 0 86641.0 + 17538 KPMKRSLSF 9 148 365.2110041910201 1092.6111831732603 3 365.2096130251884 MULTI CID FTMS 0 0 0 5137 85287.9609375 0.0401038902914431 -2 0.0741558074951171 8 Unmodified _KPMKRSLSF_ REV__ENST00000311212.8_1_8:102213857-102217695:-|nuORF 38.17557092003332 0.0854718145212029 2 MPKKSR{I|L}S{M(Oxidation (M))|F} 9 -1 + 79.002 0.0 0.0 7.2306 7.2306 90.493 0.0 0.0 0.0 12.218487496163547 10.764837301042704 10.764837301042704 9.208187539523736 0 0.6382104921644451 0.619788758288394 0.8792816040978115 0.3807196863200844 MPKKSR{I|L}S{M(Oxidation (M))|F};MPKKS[VG]{I|L}S{M(Oxidation (M))|F};MPKKSR{I|L}{M(Oxidation (M))|F}S;NNKKSR{I|L}S{M(Oxidation (M))|F};MPKKSR{I|L}AY;MPKKS[VG]{I|L}{M(Oxidation (M))|F}S;MPKK{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KA]{M(Oxidation (M))|F};NGGKKSR{I|L}S{M(Oxidation (M))|F};NNKKSR{I|L}{M(Oxidation (M))|F}S;MPKKS[VG]{I|L}AY 7.2306;6.3878;6.2454;6.1123;5.8174;5.4026;5.272;5.2696;5.1271;4.9747 -;-;-;-;-;-;-;-;-;- 628 + 1 2.027 197065.6 1.0 1853 3290 5137 DOHH2_400M_050219_2,5145 DOHH2_400M_050219_2,5145,KPMKRSLSF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5147 26.763 26.0 1767500.0 25 0 116200.0 + 24553 MLDHQPPQY 9 82 564.7601723857739 1127.5057918383477 2 564.7603027224541 MULTI CID FTMS 0 0 0 5146 1874293.25 0.6155890617019983 1 -0.089334487915039 1 Unmodified _MLDHQPPQY_ ENSG00000108604|ENST00000448276|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2;nc|ENSG00000108604|Q92925-3|SMARCD2 45.69961567697781 0.0497987121815769 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]QPPQY 9 0 + 46.621 0.0 0.0 4.1349 4.1349 73.345 0.0 0.0 0.0 0.9809101460997738 37.94871947611121 0.9809101460997738 3.590219426416681 0 1.0 1.6989700043360187 0.0 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]QPPQY;[HQ]D{I|L}MPPQY;[HD]Q{I|L}MPPQY;[QP]P[NG]MPPQY;{[HG]|PP}Q[NG]MPPQY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD][AG]PPQY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HD]QPP[AG]Y;[QP]P{[CA]|SS}QPPQY;{[HG]|PP}Q{[CA]|SS}QPPQY;[HQ]D{I|L}MPP[AG]Y 4.1349;3.8164;3.6603;3.5337;3.337;3.3182;3.3182;3.2667;3.07;2.9998 +;-;-;-;-;-;-;-;-;- + 381 1 2.027 44126.6 1.0 1854 3291 5146 DOHH2_400M_050219_2,5147 DOHH2_400M_050219_2,5147,MLDHQPPQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5148 26.764 83.0 598000.0 25 0 120510.0 + 11108 GEFRNDLQ 8 72 489.7351909933759 977.4558290535518 2 489.7350646853447 MULTI CID FTMS 0 0 0 5146 386916.1875 0.1847884215722023 4 -0.2871417999267578 2 Unmodified _GEFRNDLQ_ REV__ENST00000327906.7_1_3:52445065-52445107:+|nuORF 22.736283301280096 0.5659792798204337 2 {[CA]|SS}{[TV]|[{I|L}S]}D[QT]{I|L}Q 9 -1 + 42.13 0.0 0.0 4.3102 4.3102 73.093 0.0 0.0 0.0 35.14043591206301 4.707385630221793 4.707385630221793 3.0102999566398125 0 0.9247425010840048 0.0 0.2887254899964357 0.6861818737241735 {[CA]|SS}{[TV]|[{I|L}S]}D[QT]{I|L}Q;{[CA]|SS}D{[TV]|[{I|L}S]}[QT]{I|L}Q;{[CA]|SS}{[TV]|[{I|L}S]}N{[ET]|[MV]}{I|L}Q;[Q{I|L}][{M(Oxidation (M))|F}T]ND{I|L}Q;{[CA]|SS}D{[CP]|[EA]}[KT]{I|L}Q;{[CA]|SS}D[KA]{[ET]|[MV]}{I|L}Q;{[CA]|SS}{[TV]|[{I|L}S]}W[RD]Q;{[CA]|SS}[W{M(Oxidation (M))|F}][NP]{I|L}Q;[Q{I|L}][{M(Oxidation (M))|F}T]GGD{I|L}Q;[Q{I|L}]{[ET]|[MV]}[C(Carbamidomethyl (C))S]{I|L}Q 4.3102;4.0022;3.3465;3.1405;3.0714;3.0385;2.9044;2.8855;2.1929;1.6202 -;-;-;-;-;-;-;-;-;- 170 + 1 2.027 45438.9 1.0 1855 3291 5146 DOHH2_400M_050219_2,5148 DOHH2_400M_050219_2,5148,GEFRNDLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5149 26.766 72.0 1021300.0 25 0 70685.0 + -1 SEAAAPRAF 9 100 460.2324995748255 918.4504462164508 2 460.2340270876884 MULTI CID FTMS 0 0 0 5146 783677.4375 0.6369946168462982 -1 0.0686626434326171 3 Oxidation (M) _SEAKAM(Oxidation (M))AVP_ nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 21.74664581756881 0.2544899275067181 2 {[ES]|[DT]|[{I|L}C]}AAT 5 -1 34.521 0.0 0.0 3.7586 0.0 0.0 0.0 456.2419946457348 456.2419946457348 1.839635729831187 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}AAT 3.7586 - 223 + 1 2.027 63378.1 1.0 1856 3291 5146 DOHH2_400M_050219_2,5149 DOHH2_400M_050219_2,5149,SEAKAMAVP False False SEAAAPRAF 26.766145 460.234027087688 6561314.5 5146.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 3.016709009806315 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5150 26.769 159.0 478010.0 25 0 28616.0 + 8610 EVDSGRQIEY 10 100 598.283543521722 1194.552534110244 2 598.2825195193291 MULTI CID FTMS 0 0 0 5146 455058.34375 0.6747841847900532 -1 0.0686626434326171 4 Unmodified _EVDSGRQIEY_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF 71.70789743142352 0.0188816056000227 2 {NN|[MP]|[D{I|L}]|[EV]}[WE]VE{I|L}EY 9 5 + 55.031 0.0 0.0 4.6069 4.6069 84.833 0.0 0.0 0.0 1.5437026725057734 25.18324026756829 1.5437026725057734 16.152340397648857 0 0.8252574989159953 2.0 1.674742501084005 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}[WE]VE{I|L}EY;{[TV]|[{I|L}S]}N[DN]VE{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}[WE]{[QN]|[E{I|L}]|[KN]}VEY;{[TV]|[{I|L}S]}N[WP]{[CA]|SS}{I|L}EY;{[TV]|[{I|L}S]}GG[DN]VE{I|L}EY;{[TV]|[{I|L}S]}N[WP]{[MG]|[TS]}VEY;{[TV]|[{I|L}S]}N[WP]{[WT]|[RM]}EY;{[DS]|[MA]|[CV]|TT}{[NV]|[RG]}QVE{I|L}EY;{[QN]|[E{I|L}]|[KN]}[WD]VE{I|L}EY;{[TV]|[{I|L}S]}N[DN]{[QN]|[E{I|L}]|[KN]}VEY 4.6069;3.2547;3.1452;2.8099;2.4875;2.2867;2.2439;2.2285;1.9606;1.793 -;-;-;-;-;-;-;-;-;- 537 1 2.027 60796.6 1.0 1857 3291 5146 DOHH2_400M_050219_2,5150 DOHH2_400M_050219_2,5150,EVDSGRQIEY True True EVDSGRQIEY 26.769287 598.282519519329 3474952.75 5146.0 ENST00000504788.5_1_5:126112928-126171953:+|nuORF;;chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;;ENSG00000113368|ENST00000261366|LMNB1 6.243856906890869 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5151 26.772 107.0 475990.0 25 0 127350.0 + 19335 LEMTEASMTPF 11 70 419.5216607049971 1255.5431527151914 3 419.5214416384697 MULTI CID FTMS 0 0 0 5146 377988.71875 1.0 0 0.0 5 Unmodified _LEMTEASMTPF_ REV__ENSG00000026950|ENST00000289361|BTN3A1;REV__ENSG00000111801|ENST00000244519|BTN3A3;REV__ENSG00000186470|ENST00000377708|BTN3A2;REV__ENST00000082468.11_1_6:26405791-26410201:+|nuORF;REV__ENST00000480110.5_1_6:26444219-26444576:+|nuORF;REV__nc|ENSG00000026950|O00481-2|BTN3A1;REV__nc|ENSG00000026950|O00481-3|BTN3A1;REV__nc|ENSG00000026950|O00481-4|BTN3A1;REV__nc|ENSG00000111801|O00478-2|BTN3A3;REV__nc|ENSG00000186470|P78410-2|BTN3A2;REV__nc|ENSG00000186470|P78410-3|BTN3A2 5.296884461304476 0.8501568894076437 2 {I|L} 1 -1 13.979 0.0 0.0 1.1134 0.0 0.0 1124.4484089181194 0.0 1124.4484089181194 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1134 + + 36 + 1 2.027 50591.4 1.0 1858 3291 5146 DOHH2_400M_050219_2,5151 DOHH2_400M_050219_2,5151,LEMTEASMTPF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5152 26.775 185.0 485690.0 25 0 85721.0 -1 0 97 490.28227436893445 489.27499790233446 1 491.2810851931572 MULTI CID FTMS 0 0 0 5146 193900.03125 0.6407608207371516 -1 0.0686626434326171 6 2 Q 1 -1 11.99 0.0 0.0 2.4505 0.0 0.0 343.20561421268445 0.0 343.20561421268445 0.0 1.1522446068913703 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 2.4505 - 38 + 1 2.027 72574.4 1.0 1859 3291 5146 DOHH2_400M_050219_2,5152 DOHH2_400M_050219_2,5152, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5153 26.789 800.0 160630.0 25 0 5636.8 -1 NNSYHMHPAGI 11 138 628.7789639989239 1255.5433750646478 2 628.7792236208916 MULTI CID FTMS 0 0 0 5146 178328.03125 1.0 0 0.0 7 Oxidation (M) _NNSYHM(Oxidation (M))HPAGI_ ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948-2|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948|NUP98 26.268140514670165 0.4754186812857754 2 NNKD{[CA]|SS}RDK 9 -1 53.214 0.0 0.0 4.2384 0.0 0.0 0.0 208.03667627506096 208.03667627506096 35.110401175477904 0.0 0.0 0.0 0 0.5 0.958607314841775 0.0 1.4604093769761874 NNKD{[CA]|SS}RDK 4.2384 - 1470 + 1 2.027 96625.3 0.7699999809265137 1860 3291 5146 DOHH2_400M_050219_2,5153 DOHH2_400M_050219_2,5153,NNSYHMHPAGI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5154 26.803 800.0 376700.0 25 0 29662.0 + -1 CRNIMCLEKMY 11 154 775.3371312937586 1548.659709654317 2 775.3364135622978 MULTI CID FTMS 0 0 0 5146 163986.671875 0.0279278652955127 -2 0.1356773376464843 8 2 Carbamidomethyl (C),2 Oxidation (M) _C(Carbamidomethyl (C))RNIM(Oxidation (M))C(Carbamidomethyl (C))LEKM(Oxidation (M))Y_ REV__ENST00000370766.7_1_X:134425468-134426389:-|nuORF 11.494710602746466 0.7960433852372589 2 [QA]HDEAGAGANA{M(Oxidation (M))|F}YQ 15 -1 + 150.08 0.0 0.0 9.6911 9.6911 82.44 0.0 0.0 0.0 10.934146943495108 0.0 0.0 0.2802872360024366 0 1.9802046884880933 0.0 2.043157681736544 3.107757241334096 [QA]HDEAGAGANA{M(Oxidation (M))|F}YQ;[QA]HDEAGAGAGGA{M(Oxidation (M))|F}YQ;[QA]HDEAGAQNA{M(Oxidation (M))|F}YQ;[QA]HDEAGAQGGA{M(Oxidation (M))|F}YQ;[QA]HDEAQGANA{M(Oxidation (M))|F}YQ;[QA]HDEAQGAGGA{M(Oxidation (M))|F}YQ;[QA]HDEAGAGGQA{M(Oxidation (M))|F}YQ;[QA]HDEAGAGGAGA{M(Oxidation (M))|F}YQ;[QA]HDEAQQNA{M(Oxidation (M))|F}YK;[QA]HDEAQQGGA{M(Oxidation (M))|F}YK 9.6911;9.673;9.4931;9.4738;9.2847;9.2653;9.147;9.1289;9.0881;9.0673 -;-;-;-;-;-;-;-;-;- 195782 1 2.027 207307.2 0.6800000071525574 1861 3291 5146 DOHH2_400M_050219_2,5154 DOHH2_400M_050219_2,5154,CRNIMCLEKMY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5155 26.806 186.0 264710.0 25 0 70823.0 + 31833 RTDTGEITSY 10 63 571.7691851943789 1141.5238174555575 2 571.7712280154228 MULTI CID FTMS 0 0 0 5146 153016.546875 1.0 0 0.0 9 Unmodified _RTDTGEITSY_ ENSG00000142599|ENST00000400908|RERE;ENST00000480342.5_1_1:8525723-8716473:-|nuORF 19.361941925380144 0.5226674314761524 2 {I|L}TSY 4 6 38.928 0.0 0.0 3.4102 0.0 0.0 659.2874733758282 0.0 659.2874733758282 0.0 21.938200260161125 0.0 0.0 0 0.5 0.0 0.5 0.0 + {I|L}TSY 3.4102 + + 35 1 2.027 40077.4 1.0 1862 3291 5146 DOHH2_400M_050219_2,5155 DOHH2_400M_050219_2,5155,RTDTGEITSY False True RTDTGEITSY 26.80642 571.771228015423 786048.125 5146.0 ENST00000480342.5_1_1:8525723-8716473:-|nuORF;;ENSG00000142599|ENST00000400908|RERE 2.79911200205485 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5156 26.815 494.0 110690.0 25 0 5632.7 + -1 VSYPCAMEKL 10 93 607.2853271365166 0 607.2853271365166 PEAK CID FTMS 0 0 0 -1 0 10 Carbamidomethyl (C),Oxidation (M) _VSYPC(Carbamidomethyl (C))AM(Oxidation (M))EKL_ REV__ENSG00000171262|ENST00000397609|FAM98B;REV__ENST00000305752.4_1_15:38756353-38762648:+|nuORF;REV__nc|ENSG00000171262|Q52LJ0-1|FAM98B 11.494710602746466 0.3634749886926736 2 SEDW{I|L}SS 7 -1 29.06 0.0 0.0 2.3966 0.0 0.0 99.0725492094776 306.1463590395575 405.2189082490351 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SEDW{I|L}SS 2.3966 - 92 + 1 2.027 45436.8 1.0 1863 3291 5146 DOHH2_400M_050219_2,5156 DOHH2_400M_050219_2,5156,VSYPCAMEKL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5157 26.829 800.0 242910.0 25 0 18456.0 + 33224 SFMDVSNPFYQ 11 132 675.7891758529615 1349.563798772723 2 675.7895385622978 MULTI CID FTMS 0 0 0 5146 109351.46875 0.3856259080000542 -1 0.0686626434326171 11 Oxidation (M) _SFM(Oxidation (M))DVSNPFYQ_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 63.960520009940105 0.0530716371881472 2 [HD]EAQQNA{M(Oxidation (M))|F}YQ 11 7 + 102.6 0.0 0.0 7.6024 7.6024 90.393 0.0 0.0 0.0 4.357285695614365 81.78048831667932 4.357285695614365 9.128498242810991 0 1.424742501084005 0.0 1.305462187404089 1.5356668758921828 [HD]EAQQNA{M(Oxidation (M))|F}YQ;[HD]EAQQGGA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QNA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]NA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QGGA{M(Oxidation (M))|F}YQ;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QNA{M(Oxidation (M))|F}YQ;[HD]EAQ[TP]D{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QGGA{M(Oxidation (M))|F}YQ 7.6024;6.926;6.926;6.926;6.2518;6.2518;6.2518;5.9129;5.8615;5.2339 -;-;-;-;-;-;-;-;-;- 1384 1 2.027 140836.9 0.6100000143051147 1864 3291 5146 DOHH2_400M_050219_2,5157 DOHH2_400M_050219_2,5157,SFMDVSNPFYQ True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5158 26.832 56.0 950190.0 25 0 238090.0 -1 0 73 472.2744805413768 471.2672040747768 1 472.2745849490166 MULTI CID FTMS 0 0 0 5146 1235168.75 0.3677455447275657 3 -0.2334861755371093 12 2 {I|L} 1 -1 9.5329 0.0 0.0 2.0228 0.0 0.0 340.172246654658 0.0 340.172246654658 0.0 9.532891574188822 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.0228 - 2 + 1 2.027 47175.2 1.0 1865 3291 5146 DOHH2_400M_050219_2,5158 DOHH2_400M_050219_2,5158, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5159 26.834 104.0 567780.0 25 0 80984.0 26824 PAPSETPWL 9 83 499.2541813390768 996.4938097449536 2 499.2514831423759 MULTI CID FTMS 0 0 0 5146 177744.96875 0.8724412057607598 -1 0.0686626434326171 13 Unmodified _PAPSETPWL_ ENSG00000121413|ENST00000601144|ZSCAN18;ENST00000594191.5_1_19:58598487-58609571:-|nuORF;nc|ENSG00000121413|Q8TBC5-2|ZSCAN18;nc|ENSG00000121413|Q8TBC5-3|ZSCAN18;nc|ENSG00000121413|Q8TBC5-4|ZSCAN18 11.640296217721598 0.521594087909532 2 {[QN]|[E{I|L}]|[KN]}A{[QG]|[NA]}H{[ET]|[MV]}{I|L} 9 7 + 23.769 0.0 0.0 2.3853 2.3853 72.233 0.0 0.0 0.0 5.670299212482718 11.550755507761124 5.670299212482718 6.478174818886377 0 0.0 0.0 0.0 0.2396518287104437 {[QN]|[E{I|L}]|[KN]}A{[QG]|[NA]}H{[ET]|[MV]}{I|L};{[QN]|[E{I|L}]|[KN]}QQH{[ET]|[MV]}{I|L} 2.3853;1.7352 -;- 64 1 2.027 53602.8 1.0 1866 3291 5146 DOHH2_400M_050219_2,5159 DOHH2_400M_050219_2,5159,PAPSETPWL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5160 26.848 800.0 57121.0 25 0 10407.0 -1 0 43 806.7300292849541 0 806.7300292849541 PEAK CID FTMS 0 0 0 -1 0 14 2 N 1 -1 5.4846 0.0 0.0 0.34035 0.0 0.0 1039.3560213135904 455.03779016666255 1494.393811480253 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.34035 - 2 + 1 2.027 39669.6 0.4300000071525574 1867 3291 5146 DOHH2_400M_050219_2,5160 DOHH2_400M_050219_2,5160, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5162 26.852 42.0 1273000.0 25 0 160060.0 + 26055 NMPKKPVL 8 72 463.7776886387092 925.5408243442184 2 463.7780944705009 MULTI CID FTMS 0 0 0 5161 1262230.375 0.4104536587443841 1 -0.0924415588378906 1 Unmodified _NMPKKPVL_ ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2 32.116972079565 0.368454113111938 2 [MN]PKK[VP]{I|L} 8 0 + 41.731 0.0 0.0 4.5089 4.5089 86.718 0.0 0.0 0.0 28.96718187225762 3.2314572477816483 3.2314572477816483 41.73139171554652 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + [MN]PKK[VP]{I|L} 4.5089 + + 39 + 1 2.009 47673.9 1.0 1868 3292 5161 DOHH2_400M_050219_2,5162 DOHH2_400M_050219_2,5162,NMPKKPVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5163 26.853 37.0 1615000.0 25 0 118750.0 + 2068 APMSNPHTV 9 87 477.22927700553794 952.444001077876 2 477.2297851443291 MULTI CID FTMS 0 0 0 5161 1637848.5 0.6310673972390559 -1 0.089334487915039 2 Unmodified _APMSNPHTV_ REV__ENSG00000068697|ENST00000175091|LAPTM4A 32.30548876998284 0.1201446275138228 2 SPAMPHNS{I|L} 9 -1 + 80.46 0.0 0.0 8.4477 8.4477 95.209 0.0 0.0 0.0 17.15282626987114 17.15282626987114 17.15282626987114 13.015384402724578 0 2.1549471895720984 2.0 0.4247425010840047 0.3807196863200844 SPAMPHNS{I|L};SPAMPHGGS{I|L};[PS]AY[C(Carbamidomethyl (C))R]S{I|L};[PA]SY[C(Carbamidomethyl (C))R]S{I|L};SPA[QT]{[WT]|[RM]}Y;[PS]{[{M(Oxidation (M))|F}H]|[RQ]}{[YC]|[HE]}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NS{I|L}{[DA]|[EG]}S{I|L};[VG][HM][Y{M(Oxidation (M))|F}]S{I|L};S{I|L}[{M(Oxidation (M))|F}E][SG]NS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGS{I|L}{[DA]|[EG]}S{I|L} 8.4477;7.0812;6.6468;4.9828;3.6033;3.0737;2.8412;2.7348;2.4322;1.8744 -;-;-;-;-;-;-;-;-;- 546 + 1 2.009 51766.4 1.0 1869 3292 5161 DOHH2_400M_050219_2,5163 DOHH2_400M_050219_2,5163,APMSNPHTV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5164 26.855 41.0 1173400.0 25 0 130620.0 + 7328 EEYRGGNNW 9 76 562.7413186412809 1123.4680843493618 2 562.7414428591728 MULTI CID FTMS 0 0 0 5161 1297456.875 0.2962795471601946 -1 0.089334487915039 3 Unmodified _EEYRGGNNW_ ENST00000358746.6_1_5:94886290-94886347:-|nuORF 54.773552608820026 0.0299037012502309 2 CNW 3 7 27.976 0.0 0.0 2.4902 0.0 0.0 702.3215199201187 0.0 702.3215199201187 0.0 1.7609125905568137 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 CNW 2.4902 - 136 1 2.009 41750.5 1.0 1870 3292 5161 DOHH2_400M_050219_2,5164 DOHH2_400M_050219_2,5164,EEYRGGNNW True True EEYRGGNNW 26.854545 562.741442859173 40619284.0 5161.0 ENST00000358746.6_1_5:94886290-94886347:-|nuORF 8.432406902313232 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5165 26.856 65.0 981710.0 25 0 121530.0 + 28001 PMKRSLSFK 9 76 547.3127844210421 1092.6110159088842 2 547.3130981326103 MULTI CID FTMS 0 0 0 5161 743495.3125 1.0 0 0.0 4 Unmodified _PMKRSLSFK_ REV__ENST00000311212.8_1_8:102213857-102217695:-|nuORF 14.838274106304384 0.4350285940865338 2 MPKK 4 -1 59.667 0.0 0.0 5.461 0.0 0.0 0.0 605.3051437820496 605.3051437820496 54.18243764792422 0.0 0.0 0.0 0 0.8252574989159953 1.5228787452803376 0.0 0.4247425010840047 MPKK 5.461 - 21 + 1 2.009 54206.5 1.0 1871 3292 5161 DOHH2_400M_050219_2,5165 DOHH2_400M_050219_2,5165,PMKRSLSFK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5166 26.869 760.0 306310.0 25 0 19269.0 + 6972 EEIGTPRKF 9 158 538.7909088790915 1075.5672648249829 2 538.7907592654228 MULTI CID FTMS 0 0 0 5161 266302.8125 1.0 0 0.0 5 Unmodified _EEIGTPRKF_ ENSG00000080839|ENST00000373664|RBL1;nc|ENSG00000080839|P28749-2|RBL1 63.960520009940105 0.0238892913700936 2 EE{I|L}GT[RP]K{M(Oxidation (M))|F} 9 0 + 71.807 0.0 0.0 6.6762 6.6762 80.342 0.0 0.0 0.0 36.49705604678629 6.67235695059469 6.67235695059469 1.7609125905568277 0 1.4204841662593095 1.5228787452803376 1.274227503252014 0.0 + + EE{I|L}GT[RP]K{M(Oxidation (M))|F};EE{I|L}TG[RP]K{M(Oxidation (M))|F};EE{I|L}G[KP]EK{M(Oxidation (M))|F};EE{I|L}G[KP][Q{I|L}]Y;EE{I|L}G[KP][Y{I|L}]Q;EE{I|L}G[KP][YQ]{I|L};EE{I|L}G[KP][HA][VP];[VP]P[RP]TG{I|L}[HC];[DP]{I|L}P[KP]G{I|L}[HC];[VP]P[RP]GT{I|L}[HC] 6.6762;6.5125;5.708;3.9393;3.7631;3.1835;2.9195;2.6285;2.5085;2.4648 +;-;-;-;-;-;-;-;-;- + 1287 + 1 2.009 179738.9 1.0 1872 3292 5161 DOHH2_400M_050219_2,5166 DOHH2_400M_050219_2,5166,EEIGTPRKF True True EEIGTPRKF 26.869291 538.790759265423 2729617.125 5161.0 ENSG00000080839|ENST00000373664|RBL1;;nc|ENSG00000080839|P28749-2|RBL1 5.631617705027263 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5167 26.878 484.0 232370.0 25 0 51734.0 + 44981 YPRPRDTSF 9 96 569.7846436880772 1137.5547344429542 2 569.7858154177666 MULTI CID FTMS 0 0 0 5161 118822.8515625 0.5661453927380833 -1 0.089334487915039 6 Unmodified _YPRPRDTSF_ ENSG00000137288|ENST00000607484|UQCC2 17.11289562659939 0.3734572693229295 2 AY 2 9 16.198 0.0 0.0 1.4239 0.0 0.0 885.4426871790855 0.0 885.4426871790855 0.0 2.218487496163561 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 1.4239 - 33 + 1 2.009 91000.0 1.0 1873 3292 5161 DOHH2_400M_050219_2,5167 DOHH2_400M_050219_2,5167,YPRPRDTSF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5168 26.892 800.0 214970.0 25 0 10940.0 + 36710 TDIDPHSSLP 10 188 541.2617673746531 1080.508981816106 2 541.2620117068291 MULTI CID FTMS 0 0 0 5161 104625.1953125 1.0 0 0.0 7 Unmodified _TDIDPHSSLP_ REV__ENSG00000158711|ENST00000357992|ELK4;REV__nc|ENSG00000158711|P28324-2|ELK4 36.12702656103203 0.1984647928738587 2 [TA]QA[HK]D{I|L} 8 -1 51.348 0.0 0.0 4.7522 0.0 0.0 0.0 213.0464933729999 213.0464933729999 33.023335240493026 0.0 0.0 0.0 0 0.3252574989159953 2.0 1.459060619004511 0.805462187404089 [TA]QA[HK]D{I|L} 4.7522 - 4294 1 2.009 132364.0 0.7400000095367432 1874 3292 5161 DOHH2_400M_050219_2,5168 DOHH2_400M_050219_2,5168,TDIDPHSSLP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5169 26.906 800.0 307500.0 25 0 68759.0 + 15761 ISDIGGHAY 9 170 466.7268712470183 931.4391895608368 2 466.7260009646416 MULTI CID FTMS 0 0 0 5161 115263.1953125 0.2268297741494088 -1 0.089334487915039 8 Unmodified _ISDIGGHAY_ nc|ENSG00000111203|Q969R8-2|ITFG2 86.12129899796855 0.0160336270647063 2 {I|L}SD{I|L}GMDD 8 4 75.545 0.0 0.0 8.1106 0.0 0.0 0.0 82.0670641534789 82.0670641534789 39.16529498917844 0.0 0.0 0.0 0 0.0 2.0 1.7689301784845295 0.0 {I|L}SD{I|L}GMDD 8.1106 - 1528 + 1 2.009 190506.0 0.6000000238418579 1875 3292 5161 DOHH2_400M_050219_2,5169 DOHH2_400M_050219_2,5169,ISDIGGHAY True True ISDIGGHAY 26.905522 466.726000964642 1874021.875 5161.0 nc|ENSG00000111203|Q969R8-2|ITFG2 2.8633565505345664 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 5170 26.919 800.0 93347.0 25 0 2974.9 + + 33015 PTDNPEAHSNLY 12 129 679.3040959848411 1356.593639036482 2 679.3024169802666 MULTI CID FTMS 0 0 0 5161 109889.109375 0.6031292316320904 -1 0.089334487915039 9 Unmodified _SENQHRCAHLY_ nc|ENSG00000168067|Q12851-2|MAP4K2;ENSG00000168067|ENST00000294066|MAP4K2 19.361941925380144 0.6323962752489956 2 [TP]DN[HA]{I|L}N{[CP]|[EA]}{I|L}Y 12 -1 + 71.993 0.0 0.0 5.3069 5.3069 78.188 0.0 0.0 0.0 4.847111923618584 4.847111923618584 4.847111923618584 3.76287494579978 0 1.9291746928241125 1.5228787452803376 1.0189301784845295 0.5891368308784531 [TP]DN[HA]{I|L}N{[CP]|[EA]}{I|L}Y;[TP]DN[HA]{I|L}NDTPY;[TP]DN[HA]{I|L}NSEPY;PESN[EP]AH{I|L}SNY;PTND[EP]AH{I|L}SNY;PTDN[EP]AH{I|L}SNY;[EP]SN[HA]{I|L}N{[CP]|[EA]}{I|L}Y;PESPWQH{I|L}SNY;[EP]SN[HA]{I|L}NSEPY;[EP]SN[HA]{I|L}NDTPY 5.3069;5.0295;5.0295;4.9496;4.913;4.8565;4.7871;4.5341;4.5098;4.5098 -;-;-;-;-;-;-;-;-;- 2266 1 2.009 56199.0 0.7200000286102295 1876 3292 5161 DOHH2_400M_050219_2,5170 DOHH2_400M_050219_2,5170,SENQHRCAHLY False False PTDNPEAHSNLY 26.919359 679.302416980267 924001.5625 5161.0 nc|ENSG00000168067|Q12851-2|MAP4K2;;ENSG00000168067|ENST00000294066|MAP4K2 8.075663248697916 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5171 26.922 151.0 471280.0 25 0 39913.0 5324 DLFDILLPM 9 91 359.5295004840256 1075.5666720522768 3 359.5297119021416 MULTI CID FTMS 0 0 0 5161 229381.171875 1.0 0 0.0 10 Unmodified _DLFDILLPM_ ENSG00000058335|ENST00000558480|RASGRF1;ENSG00000113319|ENST00000265080|RASGRF2;ENST00000502677.1_1_5:80366283-80383248:+|nuORF;ENST00000560334.5_1_15:79271198-79356973:-|nuORF;nc|ENSG00000058335|Q13972|RASGRF1 8.593279151180031 0.6146971463335029 2 EE{I|L} 3 8 17.813 0.0 0.0 1.6561 0.0 0.0 0.0 701.3770939982247 701.3770939982247 4.300794624570836 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 EE{I|L} 1.6561 - 58 + 1 2.009 64915.6 1.0 1877 3292 5161 DOHH2_400M_050219_2,5171 DOHH2_400M_050219_2,5171,DLFDILLPM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5172 26.926 121.0 508760.0 25 0 40549.0 + + 33822 VTDSIRDEY 9 93 549.2558152220925 1096.4970775109848 2 549.2551147341728 MULTI CID FTMS 0 0 0 5161 180016.796875 1.0 0 0.0 11 Unmodified _SLDSYEISSP_ nc|ENSG00000087470|O00429-5|DNM1L;nc|ENSG00000087470|O00429-6|DNM1L;nc|ENSG00000087470|O00429-9|DNM1L;nc|ENSG00000087470|O00429-4|DNM1L;ENSG00000087470|ENST00000549701|DNM1L;nc|ENSG00000087470|O00429-3|DNM1L;nc|ENSG00000087470|O00429-7|DNM1L;nc|ENSG00000087470|O00429-8|DNM1L;nc|ENSG00000087470|O00429-2|DNM1L;ENST00000547548.1_1_12:32866256-32875568:+|nuORF 22.736283301280096 0.4578556481593033 2 VTDS{I|L} 5 -1 54.46 0.0 0.0 4.9667 0.0 0.0 0.0 578.2228487604124 578.2228487604124 27.46406696944478 0.0 0.0 0.0 0 0.25 2.0 0.4247425010840047 0.0 VTDS{I|L} 4.9667 - 128 + 1 2.009 54265.4 1.0 1878 3292 5161 DOHH2_400M_050219_2,5172 DOHH2_400M_050219_2,5172,SLDSYEISSP False False VTDSIRDEY 26.926352 549.255114734173 377313.28125 5161.0 nc|ENSG00000087470|O00429-5|DNM1L;;nc|ENSG00000087470|O00429-6|DNM1L;;nc|ENSG00000087470|O00429-9|DNM1L;;nc|ENSG00000087470|O00429-4|DNM1L;;ENSG00000087470|ENST00000549701|DNM1L;;nc|ENSG00000087470|O00429-3|DNM1L;;nc|ENSG00000087470|O00429-7|DNM1L;;nc|ENSG00000087470|O00429-8|DNM1L;;nc|ENSG00000087470|O00429-2|DNM1L;;ENST00000547548.1_1_12:32866256-32875568:+|nuORF 3.360928932825724 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5173 26.94 800.0 101290.0 25 0 5893.7 + 8815 EYDYNYELCYK 11 87 751.8115149628676 1501.608476992535 2 751.8102294802666 MULTI CID FTMS 0 0 0 5161 161756.875 1.0 0 0.0 12 Unmodified _EYDYNYELCYK_ REV__ENSG00000165124|ENST00000374469|SVEP1;REV__ENST00000467821.1_1_9:113205816-113312285:-|nuORF;REV__nc|ENSG00000165124|Q4LDE5-2|SVEP1;REV__nc|ENSG00000165124|Q4LDE5-4|SVEP1 8.155526934196011 0.8366696279279818 2 [YE]EAT{I|L}EEC(Carbamidomethyl (C))C(Carbamidomethyl (C))AK 12 -1 + 96.016 0.0 0.0 6.3942 6.3942 87.166 0.0 0.0 0.0 75.97881672638657 9.931197556253396 9.931197556253396 9.098233696509126 0 0.7302046884880937 2.0 1.1861818737241734 0.0 [YE]EAT{I|L}EEC(Carbamidomethyl (C))C(Carbamidomethyl (C))AK;[YE]EAT{I|L}EE[CG]C(Carbamidomethyl (C))AK;[YE]EAT{I|L}EEC(Carbamidomethyl (C))[CG]AK;[YE]EAT{I|L}EE[CG][CG]AK;[YE]A{[CA]|SS}EE{I|L}TAE[C(Carbamidomethyl (C))N];[YE]E[MN]E{I|L}TAEHH;[YE]E{[RE]|[WV]}EEC(Carbamidomethyl (C))C(Carbamidomethyl (C))AK;[YE]{M(Oxidation (M))|F}[PG]{I|L}EEC(Carbamidomethyl (C))C(Carbamidomethyl (C))AK;[YE]EAT{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}E{NN|[MP]|[D{I|L}]|[EV]};[YE][WD]{I|L}EEC(Carbamidomethyl (C))C(Carbamidomethyl (C))AK 6.3942;5.7883;5.7883;5.1841;5.1618;5.044;4.9057;4.6091;4.4065;4.3693 -;-;-;-;-;-;-;-;-;- 959 + 1 2.009 65936.5 0.7799999713897705 1879 3292 5161 DOHH2_400M_050219_2,5173 DOHH2_400M_050219_2,5173,EYDYNYELCYK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5175 26.945 91.0 660110.0 25 0 48365.0 + 34543 SPASAAQQPL 10 99 485.2535555767599 968.4925582203198 2 485.2534667849541 MULTI CID FTMS 0 0 0 5174 273184.34375 0.0298614177826626 6 -0.3790111541748047 1 Unmodified _SPASAAQQPL_ REV__ENSG00000143514|ENST00000343537|TP53BP2;REV__ENST00000481128.1_1_1:223989797-223991008:-|nuORF;REV__nc|ENSG00000143514|Q13625-2|TP53BP2;REV__nc|ENSG00000143514|Q13625|TP53BP2 22.736283301280096 0.4578556481593033 2 EEAP 4 -1 30.15 0.0 0.0 3.1131 0.0 0.0 0.0 539.2954805963499 539.2954805963499 14.410408031337138 0.0 0.0 0.0 0 0.3494850021680094 1.0457574905606752 0.0 0.0 EEAP 3.1131 - 272 + 1 1.982 51631.3 1.0 1880 3293 5174 DOHH2_400M_050219_2,5175 DOHH2_400M_050219_2,5175,SPASAAQQPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5176 26.957 644.0 219740.0 25 0 15606.0 -1 KFAMFITL 8 168 493.7726763532853 985.5307997733704 2 493.7719909548759 MULTI CID FTMS 0 0 0 5174 131619.25 0.0057370044035965 12 -0.8842601776123047 2 Oxidation (M) _KFAM(Oxidation (M))FITL_ ENSG00000170522|ENST00000302274|ELOVL6 24.67388899826682 0.525179942228231 2 {[QN]|[E{I|L}]|[KN]}S[RP]GNT{I|L} 9 -1 + 35.252 0.0 0.0 3.5769 3.5769 78.991 0.0 0.0 0.0 4.564275593309304 20.64776944979156 4.564275593309304 9.208187539523756 0 1.079689690656103 1.3979400086720375 0.0 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}S[RP]GNT{I|L};{[QN]|[E{I|L}]|[KN]}S[RP]GGGT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GNT{I|L};AAAR{[NV]|[RG]}GNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GGGT{I|L};{[NV]|[RG]}R[NG]VNT{I|L};AAAR{[NV]|[RG]}GGGT{I|L};AAAR[NG]VNT{I|L};{[NV]|[RG]}R[NG]VGGT{I|L} 3.5769;2.6426;2.1745;1.9798;1.2401;1.0794;1.0499;0.88474;0.14511 -;-;-;-;-;-;-;-;- 643 1 1.982 106495.9 1.0 1881 3293 5174 DOHH2_400M_050219_2,5176 DOHH2_400M_050219_2,5176,KFAMFITL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5177 26.958 64.0 693880.0 25 0 43880.0 7207 EEQPLQEP 8 84 485.2280871739836 968.4416214147672 2 485.2276794314384 MULTI CID FTMS 0 0 0 5174 606522.5 1.0 0 0.0 3 Unmodified _EEQPLQEP_ ENSG00000198680|ENST00000358022|TUSC1 13.50788311687929 0.7113601687236069 2 [PS]A 3 7 16.171 0.0 0.0 1.6698 0.0 0.0 0.0 710.2960885380671 710.2960885380671 5.201812293369844 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [PS]A 1.6698 - 136 1 1.982 38663.7 1.0 1882 3293 5174 DOHH2_400M_050219_2,5177 DOHH2_400M_050219_2,5177,EEQPLQEP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5178 26.961 152.0 471090.0 25 0 51035.0 + -1 MLDVEFGY 8 96 495.21955333681615 988.4245537404324 2 495.2195617556572 MULTI CID FTMS 0 0 0 5174 456377.5625 0.917766243409798 -1 0.0924415588378906 4 Oxidation (M) _M(Oxidation (M))LDVEFGY_ REV__ENST00000586582.5_1_19:4543214-4543517:-|nuORF 28.17323086031832 0.4514957916281387 2 GS{M(Oxidation (M))|F}SGY 6 -1 61.943 0.0 0.0 6.2669 0.0 0.0 372.1758900373063 0.0 372.1758900373063 0.0 49.24024714504206 0.0 0.0 0 1.3807196863200843 0.0 1.0 0.0 GS{M(Oxidation (M))|F}SGY 6.2669 - 465 1 1.982 61010.9 1.0 1883 3293 5174 DOHH2_400M_050219_2,5178 DOHH2_400M_050219_2,5178,MLDVEFGY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5179 26.966 284.0 401730.0 25 0 36203.0 + -1 YPRPRDTSF 9 111 380.1941143446007 379.1868378780007 1 380.1921569705009 MULTI CID FTMS 0 0 0 5174 272499.96875 1.0 0 0.0 5 ENSG00000137288|ENST00000607484|UQCC2 2 {M(Oxidation (M))|F} 1 -1 11.42 0.0 0.0 3.0117 0.0 0.0 214.13985409069443 0.0 214.13985409069443 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 3.0117 - 11 + 1 1.982 94385.2 1.0 1884 3293 5174 DOHH2_400M_050219_2,5179 DOHH2_400M_050219_2,5179, False False YPRPRDTSF 26.96645 380.192156970501 3645058.25 5174.0 ENSG00000137288|ENST00000607484|UQCC2 3.7499340375264487 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5180 26.98 800.0 84981.0 25 0 2678.5 + 8151 EPMPYYRQAY 10 107 659.3018608967351 1316.58916886027 2 659.3007690310478 MULTI CID FTMS 0 0 0 5174 80019.3828125 1.0 0 0.0 6 Unmodified _EPMPYYRQAY_ REV__ENSG00000131055|ENST00000376075|COX4I2 3.944395688203298 0.708391353636983 2 AY 2 -1 19.464 0.0 0.0 1.4784 0.0 0.0 1064.4775793600732 0.0 1064.4775793600732 0.0 6.699740308471753 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 1.4784 + + 303 + 1 1.982 57463.9 0.8600000143051147 1885 3293 5174 DOHH2_400M_050219_2,5180 DOHH2_400M_050219_2,5180,EPMPYYRQAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5181 26.992 665.0 287980.0 25 0 23506.0 + 36484 TADGKTYYY 9 189 541.2439988278079 0 541.2440063357353 PEAK CID FTMS 0 0 0 5174 218780.5625 0.8854324467682816 -1 0.0924415588378906 7 Unmodified _TADGKTYYY_ ENSG00000113649|ENST00000679501|TCERG1;ENST00000507175.5_1_5:145826912-145859658:+|nuORF;ENST00000513298.5_1_5:145838810-145849312:+|nuORF;nc|ENSG00000113649|O14776-2|TCERG1;nc|ENSG00000113649|O14776|TCERG1 49.52724829834842 0.0329615201929619 2 DGTYATD 7 6 36.881 0.0 0.0 3.4134 0.0 0.0 172.0753535382825 182.09417139224848 354.169524930531 0.0 0.0 0.0 0.0 0 0.2614393726401688 0.0 1.031234684152075 0.0 DGTYATD 3.4134 - 975 + 1 1.982 147011.4 1.0 1886 3293 5174 DOHH2_400M_050219_2,5181 DOHH2_400M_050219_2,5181,TADGKTYYY True True TADGKTYYY 26.991877 541.244006335735 3702123.75 5174.0 ENST00000513298.5_1_5:145838810-145849312:+|nuORF;;ENST00000507175.5_1_5:145826912-145859658:+|nuORF;;nc|ENSG00000113649|O14776-2|TCERG1;;nc|ENSG00000113649|O14776|TCERG1;;ENSG00000113649|ENST00000679501|TCERG1 5.266355991363525 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5183 26.996 23.0 1764300.0 25 0 177600.0 + + 8093 RSDPGGGGLAY 11 49 525.253555468426 1048.492558003652 2 525.2540771365166 MULTI CID FTMS 0 0 0 5182 2740096.75 0.8184009920222908 1 -0.0536556243896484 1 Unmodified _EPFFYLAY_ ENSG00000183496|ENST00000329713|MEX3B;ENST00000558133.1_1_15:82335503-82336997:-|nuORF 13.50788311687929 0.7113601687236069 2 {I|L}AY 3 -1 36.198 0.0 0.0 3.4524 0.0 0.0 683.2997022856354 0.0 683.2997022856354 0.0 29.20818753952375 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}AY 3.4524 + + 12 1 1.982 40597.4 1.0 1887 3294 5182 DOHH2_400M_050219_2,5183 DOHH2_400M_050219_2,5183,EPFFYLAY False False RSDPGGGGLAY 26.996067 525.254077136517 38671352.0 5182.0 ENSG00000183496|ENST00000329713|MEX3B;;ENST00000558133.1_1_15:82335503-82336997:-|nuORF 7.045267581939697 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5184 27.01 799.0 64464.0 25 0 8651.6 -1 CKECRKCFYQ 10 84 739.8178116602606 0 739.8173705935478 PEAK CID FTMS 0 0 0 5182 122247.25 0.7015218362998195 1 -0.0536556243896484 2 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKC(Carbamidomethyl (C))FYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 22.736283301280096 0.276231959287006 2 Y 1 -1 10.485 0.0 0.0 0.70956 0.0 0.0 1168.4880981573326 143.0466250055297 1311.5347231628623 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 Y 0.70956 + + 25 + 1 1.982 43071.7 1.0 1888 3294 5182 DOHH2_400M_050219_2,5184 DOHH2_400M_050219_2,5184,CKECRKCFYQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5185 27.013 145.0 695860.0 25 0 167570.0 8443 ESMDSDWGAWW 11 101 457.1761798159556 1368.506710048067 3 457.1757690310478 MULTI CID FTMS 0 0 0 5182 498666.15625 0.3644357636089628 -2 0.1441516876220703 3 Unmodified _ESMDSDWGAWW_ ENST00000436771.1_1_8:104145257-104153519:-|nuORF;nc|ENSG00000236939|P0C853|BAALC-AS2 3.2813086475875832 0.8596665074481906 2 {I|L}CQNHS{M(Oxidation (M))|F} 7 11 33.676 0.0 0.0 2.4608 0.0 0.0 521.139963077167 0.0 521.139963077167 0.0 23.5874521433269 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.8494850021680094 {I|L}CQNHS{M(Oxidation (M))|F} 2.4608 - 272 + 1 1.982 86763.8 1.0 1889 3294 5182 DOHH2_400M_050219_2,5185 DOHH2_400M_050219_2,5185,ESMDSDWGAWW False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_2 5186 27.017 192.0 312570.0 25 0 22497.0 + 37945 TMDNPTTTQY 10 98 586.2500904841656 1170.4856280351312 2 586.2485839724541 MULTI CID FTMS 0 0 0 5182 390322.15625 0.3493854101828698 -4 0.3021488189697265 4 Unmodified _TMDNPTTTQY_ ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF 34.93206674587334 0.2110832994570416 2 [MT]DNY 5 5 29.191 0.0 0.0 2.4939 0.0 0.0 0.0 543.2411571701499 543.2411571701499 8.199849938126889 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [MT]DNY 2.4939 - 149 1 1.982 51435.9 1.0 1890 3294 5182 DOHH2_400M_050219_2,5186 DOHH2_400M_050219_2,5186,TMDNPTTTQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5187 27.027 587.0 259400.0 25 0 25453.0 + -1 ESCFKNCHTED 11 158 685.26061277151 1368.5066726098198 2 685.2604247927666 MULTI CID FTMS 0 0 0 5182 326061.5625 0.4496684881295194 -2 0.1441516876220703 5 Carbamidomethyl (C) _ESC(Carbamidomethyl (C))FKNCHTED_ REV__ENSG00000123384|ENST00000243077|LRP1 24.99096001346401 0.505407273373304 2 ESEC[VS]CGANHS{M(Oxidation (M))|F} 13 -1 + 105.29 0.0 0.0 7.6938 7.6938 82.792 0.0 0.0 0.0 76.37073536910118 11.642078980768062 11.642078980768062 1.870866433571436 0 0.7302046884880938 1.6989700043360187 1.7416440611282624 1.360924374808178 ESEC[VS]CGANHS{M(Oxidation (M))|F};ESEC[VS]CQNHS{M(Oxidation (M))|F};ESE{I|L}[SG][C(Carbamidomethyl (C))C]NHS{M(Oxidation (M))|F};ES{I|L}E[SG][C(Carbamidomethyl (C))C]NHS{M(Oxidation (M))|F};ESEC[VS]CGANHAY;ESEC[VS]CQGGHS{M(Oxidation (M))|F};ESEC[VS]CQNHAY;ESEC[VS]C(Carbamidomethyl (C))ANHS{M(Oxidation (M))|F};ESE{I|L}[SG][C(Carbamidomethyl (C))C]NHAY;ES{I|L}E[SG][C(Carbamidomethyl (C))C]NHAY 7.6938;7.5571;7.0067;6.9061;6.7843;6.7012;6.6476;6.6427;6.4076;6.3069 -;-;-;-;-;-;-;-;-;- 5030 + 1 1.982 113011.9 1.0 1891 3294 5182 DOHH2_400M_050219_2,5187 DOHH2_400M_050219_2,5187,ESCFKNCHTED False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5188 27.03 168.0 440060.0 25 0 54047.0 + 36898 TEQPPPRSW 9 85 549.2724238958491 1096.530294858498 2 549.2746459841728 MULTI CID FTMS 0 0 0 5182 309453.75 0.6769781805980667 -2 0.1441516876220703 6 Unmodified _TEQPPPRSW_ ENSG00000113300|ENST00000261951|CNOT6 41.95555342248728 0.0647214845423414 2 [AG][YR]PPPQ[DP] 10 7 + 44.873 0.0 0.0 4.0922 4.0922 77.615 0.0 0.0 0.0 5.169752687851528 8.674771601701181 5.169752687851528 7.92674056792243 0 0.9247425010840048 2.0 0.0 0.805462187404089 [AG][YR]PPPQ[DP];{[DS]|[MA]|[CV]|TT}[WR]PPQ[DP];[AG][YR]PPP[AG][DP];{[DS]|[MA]|[CV]|TT}[WR]PP[AG][DP];[AG][YR][YK]Q[DP];{[ET]|[MV]}[WK]P[HA][QT];{[DS]|[MA]|[CV]|TT}[WR]P[HA][QT];[AG][DP][QP]RQ[QT] 4.0922;3.3693;3.2565;2.5296;2.4962;0.64734;0.26403;0.25641 -;-;-;-;-;-;-;- 180 1 1.982 64183.3 1.0 1892 3294 5182 DOHH2_400M_050219_2,5188 DOHH2_400M_050219_2,5188,TEQPPPRSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5189 27.033 116.0 484290.0 25 0 30763.0 + 747 AEQMPQHTL 9 77 527.7525859897479 1053.4906190462957 2 527.7523681521416 MULTI CID FTMS 0 0 0 5182 423913.53125 0.8662582221276546 -2 0.1441516876220703 7 Unmodified _AEQMPQHTL_ ENSG00000177200|ENST00000447540|CHD9;ENST00000562791.1_1_16:53256571-53257415:+|nuORF;nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9 26.268140514670165 0.1969607489560049 2 {[CP]|[EA]}GAM 5 7 25.802 0.0 0.0 2.4492 0.0 0.0 0.0 591.2857599977207 591.2857599977207 13.728181429864671 0.0 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.0 {[CP]|[EA]}GAM 2.4492 - 228 1 1.982 50599.6 1.0 1893 3294 5182 DOHH2_400M_050219_2,5189 DOHH2_400M_050219_2,5189,AEQMPQHTL False True AEQMPQHTL 27.032516 527.752368152142 2832022.25 5182.0 ENST00000562791.1_1_16:53256571-53257415:+|nuORF;;ENSG00000177200|ENST00000447540|CHD9;;nc|ENSG00000177200|Q3L8U1-2|CHD9;;nc|ENSG00000177200|Q3L8U1-3|CHD9 8.44325065612793 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5190 27.045 748.0 134240.0 25 0 15641.0 + 19711 KENGFTQHVY 10 106 611.7989438278806 1221.5833347225612 2 611.7984496951103 MULTI CID FTMS 0 0 0 5182 169238.703125 1.0 0 0.0 8 Unmodified _LGMIFNERDQ_ ENSG00000155506|ENST00000518297|LARP1;nc|ENSG00000155506|Q6PKG0-3|LARP1 16.149105407346934 0.5765757077271437 2 WQHVY 5 10 45.93 0.0 0.0 3.7599 0.0 0.0 490.2285328595719 0.0 490.2285328595719 0.0 30.330918867322296 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 WQHVY 3.7599 - 545 1 1.982 81984.6 1.0 1894 3294 5182 DOHH2_400M_050219_2,5190 DOHH2_400M_050219_2,5190,LGMIFNERDQ False False KENGFTQHVY 27.045491 611.79844969511 918242.875 5182.0 ENSG00000155506|ENST00000518297|LARP1;;nc|ENSG00000155506|Q6PKG0-3|LARP1 2.920931100845337 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5192 27.05 16.0 2062100.0 25 0 217140.0 -1 RAWDMRYYMNQ 11 44 775.3371312937586 1548.659709654317 2 775.3367187380791 MULTI CID FTMS 0 0 0 5191 2941852.5 0.5010142556091034 2 -0.07965087890625 1 Oxidation (M) _RAWDM(Oxidation (M))RYYMNQ_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF;ENST00000591149.5_1_19:2807001-2808381:+|nuORF 1.3295316138638542 0.8688751186870782 2 AQQNA{M(Oxidation (M))|F}YQ 8 -1 58.576 0.0 0.0 3.7824 0.0 0.0 580.2247222488169 0.0 580.2247222488169 0.0 38.09176592564398 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.8494850021680094 AQQNA{M(Oxidation (M))|F}YQ 3.7824 - 289 1 1.96 32001.6 1.0 1895 3295 5191 DOHH2_400M_050219_2,5192 DOHH2_400M_050219_2,5192,RAWDMRYYMNQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5193 27.052 98.0 664650.0 25 0 216780.0 + 17539 KPMKRSLSF 9 65 365.2110041910201 1092.6111831732603 3 365.2107726931572 MULTI CID FTMS 0 0 0 5191 285113.78125 0.1340654844850566 3 -0.1622772216796875 2 Unmodified _KPMKRSLSF_ REV__ENST00000311212.8_1_8:102213857-102217695:-|nuORF 6.2057823575117 0.6980434486082533 2 MPKK{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KA]{M(Oxidation (M))|F} 9 -1 + 35.864 0.0 0.0 3.2824 3.2824 79.977 0.0 0.0 0.0 21.884249941294065 3.925449767853316 3.925449767853316 14.471580313422198 0 0.0 0.0 0.0 0.0 MPKK{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KA]{M(Oxidation (M))|F};MPKK[NS][Y{I|L}]{I|L};MPKK[YV]{[QS]|[NT]}{I|L} 3.2824;1.9579;1.8692 -;-;- 32 + 1 1.96 59751.4 1.0 1896 3295 5191 DOHH2_400M_050219_2,5193 DOHH2_400M_050219_2,5193,KPMKRSLSF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5194 27.053 42.0 1102400.0 25 0 92167.0 + 12352 GTDGGRYDVY 10 65 551.7437493471151 1101.47294576103 2 551.7433349490166 MULTI CID FTMS 0 0 0 5191 1239926.5 0.7593986706520107 -1 0.0536556243896484 3 Unmodified _GTDGGRYDVY_ ENSG00000107651|ENST00000369075|SEC23IP;nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP 63.960520009940105 0.0261970246776379 2 {[SA]|[TG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{[SA]|[TG]}VY 10 5 + 63.055 0.0 0.0 5.7246 5.7246 82.935 0.0 0.0 0.0 21.891179610450266 55.60763921913575 21.891179610450266 6.53212513775344 0 1.8494850021680087 1.5228787452803376 1.4436726795685342 0.0 {[SA]|[TG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{[SA]|[TG]}VY;{[SA]|[TG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}VY;{[SA]|[TG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DV{[SA]|[TG]}Y;{[SA]|[TG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{[SA]|[TG]}VY;{[SA]|[TG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DVY{[SA]|[TG]};{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}VY;{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DV{[SA]|[TG]}Y;{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;{[ES]|[DT]|[{I|L}C]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WWY 5.7246;5.1316;4.4751;4.4287;3.7139;3.2424;3.1209;2.4644;2.418;1.8299 -;-;-;-;-;-;-;-;-;- 179 1 1.96 41544.4 1.0 1897 3295 5191 DOHH2_400M_050219_2,5194 DOHH2_400M_050219_2,5194,GTDGGRYDVY True True GTDGGRYDVY 27.053054 551.743334949017 8105057.0 5191.0 nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP;;ENSG00000107651|ENST00000369075|SEC23IP 6.693205992380778 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5195 27.057 209.0 382470.0 25 0 45406.0 + 36807 TEIEGTQKL 9 104 509.7742721541549 1017.5339913751098 2 509.7747375369072 MULTI CID FTMS 0 0 0 5191 371264.3125 0.1070130669807517 -3 0.1978073120117187 4 Unmodified _TEIEGTQKL_ ENSG00000120899|ENST00000346049|PTK2B;nc|ENSG00000120899|Q14289-2|PTK2B 57.72198328787511 0.0273433238377839 2 {[ET]|[MV]}{I|L}EGTQK{I|L} 9 0 + 50.262 0.0 0.0 4.9396 4.9396 83.348 0.0 0.0 0.0 33.904157105383746 11.331305630950723 11.331305630950723 9.208187539523747 0 1.25 0.0 0.7302046884880937 0.4876954943324545 + + {[ET]|[MV]}{I|L}EGTQK{I|L};{[ET]|[MV]}{I|L}EGT[AG]K{I|L};{[QN]|[E{I|L}]|[KN]}T[{I|L}A]{M(Oxidation (M))|F}{I|L}[DP];{[ET]|[MV]}{I|L}[{I|L}A]{M(Oxidation (M))|F}{I|L}[DP];[{I|L}T]E[{I|L}A]{M(Oxidation (M))|F}{I|L}[DP];{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}[{I|L}A][DP]{I|L};[{I|L}T][YV][TP]{I|L}[DP];{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}[K{I|L}]G[NP] 4.9396;4.0347;3.3882;2.7235;2.3273;1.8138;1.1611;1.0941 +;-;-;-;-;-;-;- + 471 + 1 1.96 67724.2 1.0 1898 3295 5191 DOHH2_400M_050219_2,5195 DOHH2_400M_050219_2,5195,TEIEGTQKL True True TEIEGTQKL 27.057016 509.774737536907 33200266.0 5191.0 nc|ENSG00000120899|Q14289-2|PTK2B;;ENSG00000120899|ENST00000346049|PTK2B 6.047141551971436 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5196 27.068 610.0 302140.0 25 0 19586.0 26175 NQENRFCGWF 10 138 650.7816655269174 1299.5487781206348 2 650.7811767458916 MULTI CID FTMS 0 0 0 5191 294373.90625 0.2034454236833641 -3 0.1978073120117187 5 Unmodified _NQENRFCGWF_ nc|ENSG00000164708|P15259|PGAM2 18.1463463914782 0.5430639438673815 2 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F} 11 7 + 90.508 0.0 0.0 6.9645 6.9645 78.614 0.0 0.0 0.0 0.0296199836041637 3.497494845850724 0.0296199836041637 0.0296199836041637 0 0.8494850021680094 0.0 1.2658715643802767 1.4361818737241734 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQNA{M(Oxidation (M))|F};[HS][PG]DEAQQNA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EA[AG]QNA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQGGA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F};[AG]{[WT]|[RM]}{M(Oxidation (M))|F}MQQNA{M(Oxidation (M))|F} 6.9645;6.9623;6.3892;6.2621;6.2621;6.2621;6.2621;6.2621;6.2621;5.8279 -;-;-;-;-;-;-;-;-;- 6384 1 1.96 137528.2 1.0 1899 3295 5191 DOHH2_400M_050219_2,5196 DOHH2_400M_050219_2,5196,NQENRFCGWF False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 5197 27.08 715.0 231410.0 25 0 15782.0 + 8320 ERIMKAQAL 9 137 530.3021886451196 1058.589824357039 2 530.8030883669853 MULTI CID FTMS 0 0 0 5191 199308.46875 1.0 0 0.0 6 Unmodified _ERIMKAQAL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000506915.1_1_4:190395906-190396341:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205100|Q58FG1|HSP90AA4P 70.33199760932243 0.0209706178985989 2 {[RE]|[WV]}{I|L}MKAQA{I|L} 9 0 + 70.358 0.0 0.0 6.6464 6.6464 81.224 0.0 0.0 0.0 2.8522848053423786 14.09256854528806 2.8522848053423786 2.498774732165998 0 1.0356668758921828 0.0 0.8252574989159953 1.4916440611282624 + + {[RE]|[WV]}{I|L}MKAQA{I|L};{[RE]|[WV]}{I|L}MKAAGA{I|L};[QA]AKMKAQA{I|L};[QA]AKMKAAGA{I|L};[QA]KAMKAQA{I|L};[QA]KAMKAAGA{I|L};{[RE]|[WV]}{I|L}MKAAQ{I|L};[QA]AKMKAAQ{I|L};[QA]KAMKAAQ{I|L};[KA]QAMKAQA{I|L} 6.6464;6.4104;6.377;6.1451;6.0926;5.8607;5.6927;5.4233;5.1389;4.1273 +;-;-;-;-;-;-;-;-;- + 1880 1 1.96 125100.3 1.0 1900 3295 5191 DOHH2_400M_050219_2,5197 DOHH2_400M_050219_2,5197,ERIMKAQAL True False ERIMKAQAL 27.080098 530.3021 1856072.375 5191.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENST00000506915.1_1_4:190395906-190396341:+|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1;;nc|ENSG00000205100|Q58FG1|HSP90AA4P;;ENST00000378770.1_1_4:190394307-190396341:+|nuORF 5.043609619140625 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5198 27.093 746.0 246440.0 25 0 10295.0 + + 29855 AEASALQQQQY 11 142 618.294846339286 1234.575139745372 2 618.7963744997978 MULTI CID FTMS 0 0 0 5191 177482.34375 0.5230819517944924 -1 0.0536556243896484 7 Unmodified _QQQQYHQYL_ ENSG00000167615|ENST00000326764|LENG8;nc|ENSG00000167615|Q96PV6-1|LENG8 28.486842064014134 0.1687311288560894 2 [AG]TEAHYEDV 10 -1 41.791 0.0 0.0 3.385 0.0 0.0 0.0 159.10868401710937 159.10868401710937 18.66972267683056 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 1.3539171939081172 0.0 [AG]TEAHYEDV 3.385 - 9309 1 1.96 135002.2 1.0 1901 3295 5191 DOHH2_400M_050219_2,5198 DOHH2_400M_050219_2,5198,QQQQYHQYL False False AEASALQQQQY 27.093031 618.796374499798 1737588.25 5191.0 ENSG00000167615|ENST00000326764|LENG8;;nc|ENSG00000167615|Q96PV6-1|LENG8 6.257597764333089 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5200 27.097 78.0 703400.0 25 0 262090.0 -1 0 57 472.2744805413768 471.2672040747768 1 472.2730590701103 MULTI CID FTMS 0 0 0 5199 589426.875 0.1754894683207794 8 -0.6725978851318359 1 2 {I|L} 1 -1 11.783 0.0 0.0 2.5002 0.0 0.0 340.1721245843455 0.0 340.1721245843455 0.0 2.3187864658084045 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.5002 - 10 + 1 1.96 48700.3 1.0 1902 3296 5199 DOHH2_400M_050219_2,5200 DOHH2_400M_050219_2,5200, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5201 27.111 800.0 69571.0 25 0 13277.0 + + -1 WSDTSSGGPARAY 13 99 678.3054687380791 0 678.3054687380791 PEAK CID FTMS 0 0 0 -1 0 2 Carbamidomethyl (C) _IC(Carbamidomethyl (C))SRHEDLYY_ nc|ENSG00000058262|P61619-3|SEC61A1;ENSG00000058262|ENST00000243253|SEC61A1 3.944395688203298 0.3961065659209837 2 SDTSSN 6 -1 26.375 0.0 0.0 1.9471 0.0 0.0 187.0776426650694 573.2800997369749 760.3577424020443 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SDTSSN 1.9471 - 121 + 1 1.96 45898.6 0.7699999809265137 1903 3296 5199 DOHH2_400M_050219_2,5201 DOHH2_400M_050219_2,5201,ICSRHEDLYY False False WSDTSSGGPARAY 27.11117 678.305468738079 579123.375 5199.0 nc|ENSG00000058262|P61619-3|SEC61A1;;ENSG00000058262|ENST00000243253|SEC61A1 6.66694704691569 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5202 27.124 731.0 273440.0 25 0 39074.0 + 29301 QIKAHVASL 9 177 483.7901687785206 965.5657846238412 2 483.7895080447197 MULTI CID FTMS 0 0 0 5199 257848.84375 0.9442808621018972 -1 0.0475902557373046 3 Unmodified _QIKAHVASL_ ENSG00000149806|ENST00000529639|FAU 49.93300154707207 0.0405168250806675 2 [Q{I|L}]HKAKE{I|L} 8 5 + 43.858 0.0 0.0 4.5422 4.5422 72.62 0.0 0.0 0.0 7.731404076107992 14.024174299985004 7.731404076107992 1.901730071934608 0 0.7059771852360797 1.3979400086720375 0.5 0.5 [Q{I|L}]HKAKE{I|L};[Q{I|L}]HKAGVT{I|L};{[VA]|[{I|L}G]}HAKAKE{I|L};[Q{I|L}]HKAGTV{I|L};[Q{I|L}]HKQVT{I|L};[H{I|L}]GAKAKE{I|L};{[VA]|[{I|L}G]}HKAAKE{I|L};{[VA]|[{I|L}G]}HAKAGVT{I|L};[H{I|L}]GKAAKE{I|L};[H{I|L}]GAKAGVT{I|L} 4.5422;4.3452;3.7415;3.6536;3.6506;3.64;3.6121;3.5501;3.5106;3.4486 -;-;-;-;-;-;-;-;-;- 1415 1 1.96 154422.5 1.0 1904 3296 5199 DOHH2_400M_050219_2,5202 DOHH2_400M_050219_2,5202,QIKAHVASL True True QIKAHVASL 27.123839 483.78950804472 1461032.75 5199.0 ENSG00000149806|ENST00000529639|FAU 6.789801915486653 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5203 27.125 30.0 1684500.0 25 0 842600.0 + 41753 VPTQPPGG 8 58 376.70120056116485 751.3878481891297 2 376.6997863650322 MULTI CID FTMS 0 0 0 5199 228691.5625 0.842261922231303 -1 0.0475902557373046 4 Unmodified _VPTQPPGG_ REV__ENST00000485713.5_1_7:150755703-150755907:+|nuORF 0.7936320650641473 0.8195151834710337 2 D 1 -1 16.528 0.0 0.0 2.1997 0.0 0.0 618.3498976049485 0.0 618.3498976049485 0.0 0.0743212711953447 0.0 0.0 0 0.0 0.0 0.1923877696554315 0.0 D 2.1997 - 2 + 1 1.96 47159.3 1.0 1905 3296 5199 DOHH2_400M_050219_2,5203 DOHH2_400M_050219_2,5203,VPTQPPGG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5205 27.13 62.0 622150.0 25 0 62024.0 + 7329 EEYRGGNNW 9 74 562.7413186412809 1123.4680843493618 2 562.7411987185478 MULTI CID FTMS 0 0 0 5204 772214.6875 0.1763383603196454 4 -0.4126338958740234 1 Unmodified _EEYRGGNNW_ ENST00000358746.6_1_5:94886290-94886347:-|nuORF 48.345845343767074 0.0439967357579942 2 NW 2 7 22.747 0.0 0.0 2.0247 0.0 0.0 805.3378163068375 0.0 805.3378163068375 0.0 5.039237471316294 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 + NW 2.0247 + + 42 1 1.944 36188.6 1.0 1906 3297 5204 DOHH2_400M_050219_2,5205 DOHH2_400M_050219_2,5205,EEYRGGNNW True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5206 27.132 85.0 638240.0 25 0 42030.0 34530 SPAPCPVWP 9 79 477.22927700553794 952.444001077876 2 477.2289916872978 MULTI CID FTMS 0 0 0 5204 636688.5 0.2453177778940107 4 -0.4126338958740234 2 Unmodified _SPAPCPVWP_ ENST00000274811.8_1_5:175963981-175964065:-|nuORF 24.67388899826682 0.2172451872415813 2 SPAMP[DV]AD 9 5 60.896 0.0 0.0 6.3936 0.0 0.0 0.0 66.03575311832265 66.03575311832265 49.11297301596369 0.0 0.0 0.0 0 0.0 2.0 0.9291746928241126 0.0 SPAMP[DV]AD 6.3936 - 206 + 1 1.944 46353.2 1.0 1907 3297 5204 DOHH2_400M_050219_2,5206 DOHH2_400M_050219_2,5206,SPAPCPVWP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5207 27.138 365.0 267420.0 25 0 24250.0 -1 0 120 422.1228216922048 842.2310904512096 2 422.1224853396416 MULTI CID FTMS 0 0 0 5204 288285.34375 1.0 0 0.0 3 2 Y 1 -1 11.99 0.0 0.0 1.4236 0.0 0.0 661.1567018787472 0.0 661.1567018787472 0.0 -8.365618417184997 -8.365618417184997 0.0 0 0.0 0.0 0.0 0.0 Y 1.4236 - 16 + 1 1.944 77610.7 1.0 1908 3297 5204 DOHH2_400M_050219_2,5207 DOHH2_400M_050219_2,5207, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5208 27.152 800.0 190480.0 25 0 11198.0 + 368 AEDENGKIVGY 11 171 597.7851438218175 0 597.7850829958916 PEAK CID FTMS 0 0 0 5204 168565.828125 0.902931355471733 -1 0.0320606231689453 4 Unmodified _AEDENGKIVGY_ ENSG00000102030|ENST00000464845|NAA10;ENST00000466877.5_1_X:153197755-153200402:-|nuORF;ENST00000478177.1_1_X:153199394-153200402:-|nuORF;ENST00000494813.5_1_X:153187159-153200402:-|nuORF;nc|ENSG00000102030|P41227-2|NAA10 84.5221896805406 3.234088755237037e-06 2 VAE{I|L}VED 7 8 43.194 0.0 0.0 3.619 0.0 0.0 238.09297943875373 197.0573366754516 435.1503161142053 0.0 0.0 0.0 0.0 0 2.06295299324845 0.0 1.337180496500464 0.0 VAE{I|L}VED 3.619 - 1158 + 1 1.944 115351.9 0.9300000071525574 1909 3297 5204 DOHH2_400M_050219_2,5208 DOHH2_400M_050219_2,5208,AEDENGKIVGY True True AEDENGKIVGY 27.152282 597.785082995892 1386726.75 5204.0 ENST00000478177.1_1_X:153199394-153200402:-|nuORF;;ENST00000494813.5_1_X:153187159-153200402:-|nuORF;;ENSG00000102030|ENST00000464845|NAA10;;ENST00000466877.5_1_X:153197755-153200402:-|nuORF;;nc|ENSG00000102030|P41227-2|NAA10 7.743740717569987 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5209 27.166 800.0 286720.0 25 0 36885.0 36735 TDSDEDIRETY 11 168 448.5247830030268 1342.5525196092804 3 448.5236694216728 MULTI CID FTMS 0 0 0 5204 121559.2421875 0.2576452310245494 -4 0.1850166320800781 5 Unmodified _TDSDEDIRETY_ ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A 12.240655878213236 0.7805268987462184 2 S{M(Oxidation (M))|F}TY 4 8 29.655 0.0 0.0 2.2088 0.0 0.0 826.3318297672866 0.0 826.3318297672866 0.0 18.81726996461292 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 S{M(Oxidation (M))|F}TY 2.2088 - 228 + 1 1.944 175178.7 0.6700000166893005 1910 3297 5204 DOHH2_400M_050219_2,5209 DOHH2_400M_050219_2,5209,TDSDEDIRETY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5210 27.18 800.0 229490.0 25 0 14457.0 + 30545 REMENYEKI 9 171 606.2897164413434 1210.5648799494868 2 606.2890502810478 MULTI CID FTMS 0 0 0 5204 133144.0 1.0 0 0.0 6 Unmodified _REMENYEKI_ ENSG00000163634|ENST00000295899|THOC7;ENST00000487570.1_1_3:63824036-63825384:-|nuORF 24.99096001346401 0.2132109383330889 2 NYEK{I|L} 5 4 43.998 0.0 0.0 3.6345 0.0 0.0 545.2275257794937 0.0 545.2275257794937 0.0 31.77948461635836 0.0 0.0 0 0.5 0.0 0.0 0.7059771852360797 + NYEK{I|L} 3.6345 + + 224 1 1.944 135230.1 0.8100000023841858 1911 3297 5204 DOHH2_400M_050219_2,5210 DOHH2_400M_050219_2,5210,REMENYEKI False True REMENYEKI 27.17993 606.2896 694439.4375 5204.0 ENSG00000163634|ENST00000295899|THOC7;;ENST00000487570.1_1_3:63824036-63825384:-|nuORF -0.2228166063626607 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5211 27.194 800.0 178360.0 25 0 42124.0 + 15934 ISYLWFYF 8 152 569.7846436880772 1137.5547344429542 2 569.7861816287041 MULTI CID FTMS 0 0 0 5204 100966.234375 0.4810654487908258 4 -0.4126338958740234 7 Unmodified _ISYLWFYF_ REV__ENST00000548783.1_1_12:77256588-77256804:-|nuORF 11.640296217721598 0.738950129755968 2 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 1.1863 0.0 0.0 972.4754477992028 0.0 972.4754477992028 0.0 -0.4845500650402812 -0.4845500650402812 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1863 + + 116 + 1 1.944 112334.0 0.7599999904632568 1912 3297 5204 DOHH2_400M_050219_2,5211 DOHH2_400M_050219_2,5211,ISYLWFYF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5212 27.208 800.0 164530.0 25 0 21354.0 + 36133 SVTGSEGSLSY 11 140 543.7507103551482 1085.4868677770962 2 543.7515136599541 MULTI CID FTMS 0 0 0 5204 99784.21875 1.0 0 0.0 8 Unmodified _SVTGSEGSLSY_ REV__ENSG00000034677|ENST00000341084|RNF19A;REV__nc|ENSG00000034677|Q9NV58-3|RNF19A 34.40172386719151 0.2986346176549658 2 [HM]{I|L}S[TA][YT]Y 9 -1 + 36.456 0.0 0.0 3.3585 3.3585 68.876 0.0 0.0 0.0 16.363781092484693 2.8284683316543 2.8284683316543 2.04119982655925 0 0.5 0.0 1.2302046884880935 0.0 [HM]{I|L}S[TA][YT]Y;[HM]{I|L}S{[CA]|SS}[YV]Y;[{I|L}T][DN]{[CA]|SS}S{I|L}SY;{[QN]|[E{I|L}]|[KN]}[NS]{[CA]|SS}S{I|L}SY;[HM]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[YT]Y;{[QN]|[E{I|L}]|[KN]}G[SG]{[CA]|SS}S{I|L}SY;[HM]{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[YV]Y;[PG]N[WY]S{I|L}SY;[HM]HH{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SY;[QA]SQQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SY 3.3585;3.1705;2.9896;2.5736;2.411;2.3474;2.2229;2.1903;2.1113;2.0606 -;-;-;-;-;-;-;-;-;- 664 + 1 1.944 104193.9 0.75 1913 3297 5204 DOHH2_400M_050219_2,5212 DOHH2_400M_050219_2,5212,SVTGSEGSLSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5214 27.225 800.0 173680.0 25 0 16087.0 -1 AEFLHCKS 8 150 496.23708632925394 0 496.6791564822197 PEAK CID FTMS 0 0 0 5213 38306.015625 1.0 0 0.0 1 Carbamidomethyl (C) _AEFLHC(Carbamidomethyl (C))KS_ ENSG00000079805|ENST00000389253|DNM2;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000079805|P50570-3|DNM2;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2 9.347437153973935 0.5488964601725408 2 S 1 -1 10.242 0.0 0.0 1.0341 0.0 0.0 494.2091752446423 406.1872347467407 900.3964099913829 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 S 1.0341 + + 33 + 1 1.93 109098.0 0.8399999737739563 1914 3298 5213 DOHH2_400M_050219_2,5214 DOHH2_400M_050219_2,5214,AEFLHCKS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5215 27.226 3.9 14523000.0 25 0 3071300.0 + 18544 LAAARLAAA 9 67 414.25840645872 826.50225998424 2 414.2585021853447 MULTI CID FTMS 0 0 0 5213 11699396.0 0.136826040822765 -1 0.0826263427734375 2 Unmodified _LAAARLAAA_ ENSG00000167004|ENST00000300289|PDIA3;ENST00000469684.1_1_15:44038662-44048907:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF 34.10243960390752 0.1078313939113124 2 {I|L}AA 3 6 50.445 0.0 0.0 6.1035 0.0 0.0 0.0 568.3222139947874 568.3222139947874 30.718786064951967 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}AA 6.1035 + + 18 + 1 1.93 51888.4 1.0 1915 3298 5213 DOHH2_400M_050219_2,5215 DOHH2_400M_050219_2,5215,LAAARLAAA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5216 27.227 12.0 4162100.0 25 0 359770.0 -1 AHQCRERL 8 75 535.26735980417 1068.52016667514 2 535.2671996951103 MULTI CID FTMS 0 0 0 5213 5282070.5 0.2615590782864296 -1 0.0826263427734375 3 Carbamidomethyl (C) _AHQC(Carbamidomethyl (C))RERL_ ENST00000574515.1_1_17:2894647-2911342:+|nuORF 28.486842064014134 0.4448922141344407 2 QDT[WK]A{I|L} 7 -1 62.281 0.0 0.0 5.8287 0.0 0.0 208.08469411830248 0.0 208.08469411830248 0.0 46.083041560618696 0.0 0.0 0 2.6747425010840047 0.0 0.4247425010840047 0.3054621874040891 QDT[WK]A{I|L} 5.8287 - 292 + 1 1.93 42467.9 1.0 1916 3298 5213 DOHH2_400M_050219_2,5216 DOHH2_400M_050219_2,5216,AHQCRERL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5217 27.233 299.0 404600.0 25 0 53030.0 + 897 AEWSSKTSY 9 118 529.7429707601023 1057.4713885870044 2 529.7431518435478 MULTI CID FTMS 0 0 0 5213 273217.28125 0.5688768243293978 -1 0.0826263427734375 4 Unmodified _AEWSSKTSY_ ENSG00000139437|ENST00000405876|TCHP;ENST00000537218.1_1_12:110338138-110342619:+|nuORF 55.50274090549119 0.0285720310785888 2 {[CP]|[EA]}WSSKTSY 9 0 + 55.288 0.0 0.0 5.2284 5.2284 88.343 0.0 0.0 0.0 14.948500216800936 12.98332479720628 12.98332479720628 22.246319401893253 0 1.1421590589602533 0.0 0.805462187404089 0.5 + + {[CP]|[EA]}WSSKTSY;{[CP]|[EA]}W[HM]T[VG]Q;{[CP]|[EA]}W[HM]T[NG]{I|L};[KS]STWST{[{M(Oxidation (M))|F}D]|MM};[KS]STWSY{[CP]|[EA]};[KS]STW{[CP]|[EA]}SY;{[CP]|[EA]}W[HM]SVAQ;[KS]STSWY{[CP]|[EA]};[KS]STSWT{[{M(Oxidation (M))|F}D]|MM};[KS]STSYW{[CP]|[EA]} 5.2284;3.1246;2.9214;2.9004;2.9004;2.7334;2.6976;2.4721;2.4721;2.4492 +;-;-;-;-;-;-;-;-;- + 1031 + 1 1.93 97356.5 1.0 1917 3298 5213 DOHH2_400M_050219_2,5217 DOHH2_400M_050219_2,5217,AEWSSKTSY True True AEWSSKTSY 27.232734 529.743151843548 2578284.25 5213.0 ENST00000537218.1_1_12:110338138-110342619:+|nuORF;;ENSG00000139437|ENST00000405876|TCHP 6.891771952311198 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5218 27.247 800.0 171820.0 25 0 14174.0 + -1 YFYICAGADYT 11 144 672.2839017755534 1342.5532506179068 2 672.2835571169853 MULTI CID FTMS 0 0 0 5213 172600.265625 0.5132168561817717 -2 0.1146869659423828 5 Carbamidomethyl (C) _YFYIC(Carbamidomethyl (C))AGADYT_ REV__ENSG00000018510|ENST00000264167|AGPS 8.745405648335112 0.8338865417133445 2 [Y{M(Oxidation (M))|F}]T{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))D][KS]Y 10 -1 + 42.637 0.0 0.0 3.1758 3.1758 79.083 0.0 0.0 0.0 14.902953031565858 2.6760624017703094 2.6760624017703094 11.890887316388472 0 0.0 2.0 0.4247425010840047 0.3494850021680094 [Y{M(Oxidation (M))|F}]T{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))D][KS]Y;[Y{M(Oxidation (M))|F}]TAEAAD[HT]{[MS]|[{M(Oxidation (M))|F}A]};[Y{M(Oxidation (M))|F}]AEC(Carbamidomethyl (C))[{M(Oxidation (M))|F}E][KS]Y;[Y{M(Oxidation (M))|F}]AWC{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RTY;[Y{M(Oxidation (M))|F}]TAEAW[HT]{[MS]|[{M(Oxidation (M))|F}A]};[Y{M(Oxidation (M))|F}]AW[YN]SETY;[Y{M(Oxidation (M))|F}]AWWD[HT]{[MS]|[{M(Oxidation (M))|F}A]};[Y{M(Oxidation (M))|F}]AEC(Carbamidomethyl (C)){[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RTY;[Y{M(Oxidation (M))|F}]TAEAAS[HT][{M(Oxidation (M))|F}V];[Y{M(Oxidation (M))|F}]AWDAD[HT]{[MS]|[{M(Oxidation (M))|F}A]} 3.1758;2.2901;2.2749;2.2477;2.2461;2.1172;2.0527;2.0235;2.0219;1.9629 -;-;-;-;-;-;-;-;-;- 3709 + 1 1.93 100636.3 0.8700000047683716 1918 3298 5213 DOHH2_400M_050219_2,5218 DOHH2_400M_050219_2,5218,YFYICAGADYT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5219 27.26 800.0 167220.0 25 0 6422.6 + 16694 KEQYQQQQQW 10 137 697.3289440874355 0 697.3303710818291 PEAK CID FTMS 0 0 0 5213 149402.484375 0.7839308490303141 -1 0.0826263427734375 6 Unmodified _KEQYQQQQQW_ ENSG00000138668|ENST00000313899|HNRNPD;ENST00000514325.1_1_4:83277919-83278597:-|nuORF;nc|ENSG00000138668|Q14103-2|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD;nc|ENSG00000138668|Q14103-4|HNRNPD 107.09958533191995 6.489014742885909e-05 2 QQQQQYQE 8 5 83.268 0.0 0.0 5.9791 0.0 0.0 204.09025786938588 125.07248865299064 329.1627465223765 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 1.7302046884880935 2.363364334130467 QQQQQYQE 5.9791 - 4716 + 1 1.93 99609.5 0.8100000023841858 1919 3298 5213 DOHH2_400M_050219_2,5219 DOHH2_400M_050219_2,5219,KEQYQQQQQW True True KEQYQQQQQW 27.260403 697.330371081829 1430749.125 5213.0 nc|ENSG00000138668|Q14103-4|HNRNPD;;ENST00000514325.1_1_4:83277919-83278597:-|nuORF;;ENSG00000138668|ENST00000313899|HNRNPD;;nc|ENSG00000138668|Q14103-3|HNRNPD;;nc|ENSG00000138668|Q14103-2|HNRNPD 7.154805819193522 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5220 27.274 800.0 254700.0 25 0 63761.0 + 4718 DECLLPCL 8 163 453.2094778851756 0 453.3000671267509 PEAK CID FTMS 0 0 0 5213 85607.28125 0.0316933034987486 6 -0.5579109191894531 7 Unmodified _DECLLPCL_ REV__ENST00000515688.5_1_5:83680397-83695444:+|nuORF 11.114462752807354 0.5290325060821968 2 VH 2 -1 7.9588 0.0 0.0 0.88 0.0 0.0 130.9114854019228 534.3401583307249 665.2516437326476 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VH 0.88 - 114 + 1 1.93 160012.7 0.6200000047683716 1920 3298 5213 DOHH2_400M_050219_2,5220 DOHH2_400M_050219_2,5220,DECLLPCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5221 27.288 800.0 376710.0 25 0 29768.0 + 7312 EEVQVDPRKY 10 192 421.55054975848 1261.62981987564 3 421.5500366091728 MULTI CID FTMS 0 0 0 5213 101422.7109375 0.3199663729993394 -2 0.1146869659423828 8 Unmodified _EEVQVDPRKY_ ENSG00000069956|ENST00000261845|MAPK6 25.997395711884035 0.38458358153512 2 EEVQVDY[RK]P 10 2 + 39.57 0.0 0.0 3.1364 3.1364 71.404 0.0 0.0 0.0 17.161780807960554 0.1719816560065012 0.1719816560065012 4.637216517823354 0 0.25 0.958607314841775 0.0 0.805462187404089 EEVQVDY[RK]P;EEVQVDY[RP]K;EEV[AG]VDY[RK]P;EEV[AG]VDY[RP]K;{[QV]|[N{I|L}]|[RA]|[KV]}[HQ]KGVQV[HC];[AG]V[HQ]KGVQV[HC];EEVQVMRRC{I|L};[DP][HK]{[TV]|[{I|L}S]}VQV[HC];{[QV]|[N{I|L}]|[RA]|[KV]}[YR]M[YK]S{[MG]|[TS]};[PA][RP]QQVQV[HC] 3.1364;2.7688;2.41;2.0424;1.9848;1.652;1.4803;1.3101;0.93281;0.89186 -;-;-;-;-;-;-;-;-;- 730 + 1 1.93 240109.2 0.5199999809265137 1921 3298 5213 DOHH2_400M_050219_2,5221 DOHH2_400M_050219_2,5221,EEVQVDPRKY False True EEVQVDPRKY 27.288032 421.550036609173 5484126.0 5213.0 ENSG00000069956|ENST00000261845|MAPK6 8.292210419972738 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5222 27.293 191.0 331730.0 25 0 33329.0 + 36804 TEIEDSHTL 9 93 522.7453730339329 1043.4761931346657 2 522.7451049685478 MULTI CID FTMS 0 0 0 5213 198079.421875 0.636447865988262 -1 0.0826263427734375 9 Unmodified _TEIEDSHTL_ ENSG00000136270|ENST00000258770|TBRG4;ENST00000488222.5_1_7:45142883-45145249:-|nuORF;nc|ENSG00000136270|Q969Z0-2|TBRG4 71.13359017698441 0.0206607516130725 2 EHSD{M(Oxidation (M))|F}{I|L}[DP] 8 7 42.509 0.0 0.0 4.0738 0.0 0.0 85.08989150215 0.0 85.08989150215 0.0 4.184406037094774 0.0 0.0 0 0.75 0.0 1.1643943297944483 0.0 EHSD{M(Oxidation (M))|F}{I|L}[DP] 4.0738 - 304 1 1.93 54937.0 1.0 1922 3298 5213 DOHH2_400M_050219_2,5222 DOHH2_400M_050219_2,5222,TEIEDSHTL True True TEIEDSHTL 27.29318 522.745104968548 986489.4375 5213.0 ENSG00000136270|ENST00000258770|TBRG4;;nc|ENSG00000136270|Q969Z0-2|TBRG4;;ENST00000488222.5_1_7:45142883-45145249:-|nuORF 5.5891439119974775 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5223 27.297 214.0 273050.0 25 0 17116.0 39723 VEKEREEY 8 91 541.2631007652365 0 541.2629882693291 PEAK CID FTMS 0 0 0 5213 136542.1875 1.0 0 0.0 10 Unmodified _VEKEREEY_ ENSG00000122970|ENST00000242591|IFT81;nc|ENSG00000122970|Q8WYA0-3|IFT81 12.531546534597751 0.5131024102181418 2 ETA 3 7 17.92 0.0 0.0 1.6584 0.0 0.0 181.07457331591 595.2842655947024 776.3588389106123 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 ETA 1.6584 - 81 + 1 1.93 50741.4 1.0 1923 3298 5213 DOHH2_400M_050219_2,5223 DOHH2_400M_050219_2,5223,VEKEREEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5224 27.305 454.0 218060.0 25 0 53711.0 + -1 AELGKYLGM 9 112 499.2541813390768 996.4938097449536 2 499.2547790408134 MULTI CID FTMS 0 0 0 5213 126020.125 0.6185556225772026 6 -0.5579109191894531 11 Oxidation (M) _AELGKYLGM(Oxidation (M))_ REV__ENSG00000100372|ENST00000435456|SLC25A17;REV__ENST00000447566.5_1_22:41166840-41215302:-|nuORF 15.847184025352805 0.4077185912009129 2 [PA]A 3 -1 28.468 0.0 0.0 2.8568 0.0 0.0 0.0 754.3433482793864 754.3433482793864 15.791812460476248 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [PA]A 2.8568 - 98 1 1.93 80196.2 1.0 1924 3298 5213 DOHH2_400M_050219_2,5224 DOHH2_400M_050219_2,5224,AELGKYLGM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5225 27.319 800.0 321460.0 25 0 38425.0 + 554 AEIEKLGQKY 10 142 589.8242558328708 1177.6339587325415 2 589.8246948122978 MULTI CID FTMS 0 0 0 5213 110436.7109375 0.3130428406705968 -1 0.0826263427734375 12 Unmodified _AEIEKLGQKY_ ENSG00000119616|ENST00000341162|FCF1 111.30893174071366 0.0018429578110034 2 AE{I|L}EK{I|L}GQKY 10 0 + 129.24 0.0 0.0 10.975 10.975 92.868 0.0 0.0 0.0 31.7609125905568 9.330615878019572 9.330615878019572 9.164539485499231 0 3.079689690656103 1.5228787452803376 0.805462187404089 1.860924374808178 + + AE{I|L}EK{I|L}GQKY;AE{I|L}EK{I|L}G[AG]KY;AE{I|L}EK{I|L}GQYK;AE{I|L}EK{I|L}G[AG]YK;AE{I|L}EK{I|L}G[YK]Q;{[QN]|[E{I|L}]|[KN]}AE{I|L}KGQKY;AE{I|L}EK{I|L}G[HK][PG];AE{I|L}EK{[CP]|[EA]}{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}K{I|L}AEGQKY;{[CP]|[EA]}{I|L}E{I|L}KGQKY 10.975;10.197;10.182;9.4042;8.7557;6.9775;6.9261;6.8443;6.4359;6.298 +;-;-;-;-;-;-;-;-;- + 4521 + 1 1.93 190901.5 0.6299999952316284 1925 3298 5213 DOHH2_400M_050219_2,5225 DOHH2_400M_050219_2,5225,AEIEKLGQKY True True AEIEKLGQKY 27.319119 589.824694812298 2846041.0 5213.0 ENSG00000119616|ENST00000341162|FCF1 7.26650349299113 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5227 27.324 37.0 1091100.0 25 0 135290.0 + 36808 TEIEGTQKL 9 65 509.7742721541549 1017.5339913751098 2 509.7744018435478 MULTI CID FTMS 0 0 0 5226 1623988.875 0.4680978602174984 1 -0.1137771606445312 1 Unmodified _TEIEGTQKL_ ENSG00000120899|ENST00000346049|PTK2B;nc|ENSG00000120899|Q14289-2|PTK2B 34.40172386719151 0.1061884637610825 2 {[QN]|[E{I|L}]|[KN]}TA{I|L}{M(Oxidation (M))|F}{I|L}[DP] 9 8 + 44.816 0.0 0.0 4.4044 4.4044 82.21 0.0 0.0 0.0 9.604093769761867 7.147642715192504 7.147642715192504 9.604093769761867 0 0.4247425010840047 1.3010299956639813 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}TA{I|L}{M(Oxidation (M))|F}{I|L}[DP];[{I|L}T]EA{I|L}{M(Oxidation (M))|F}{I|L}[DP];{[ET]|[MV]}{I|L}A{I|L}{M(Oxidation (M))|F}{I|L}[DP];{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}{I|L}A[DP]{I|L};{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}{I|L}[WP]{I|L} 4.4044;3.4605;3.4035;2.6813;2.1186 -;-;-;-;- 175 1 1.909 38351.1 1.0 1926 3299 5226 DOHH2_400M_050219_2,5227 DOHH2_400M_050219_2,5227,TEIEGTQKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5228 27.325 66.0 680530.0 25 0 58328.0 + -1 SFARGCQPCAF 11 70 650.7816655269174 1299.5487781206348 2 650.7810546755791 MULTI CID FTMS 0 0 0 5226 968251.375 0.6691704225019941 1 -0.1137771606445312 2 2 Carbamidomethyl (C) _SFARGC(Carbamidomethyl (C))QPC(Carbamidomethyl (C))AF_ REV__ENSG00000083812|ENST00000196482|ZNF324 8.155526934196011 0.8366696279279818 2 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F} 11 -1 + 76.344 0.0 0.0 5.8746 5.8746 85.698 0.0 0.0 0.0 3.763327241663319 60.312898245978175 3.763327241663319 9.128498242811006 0 0.805462187404089 0.0 0.5796896906561032 0.75 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F};[HS][PG]DEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}G[HN]EAQ[EP]S{M(Oxidation (M))|F};[AG]GG[HN]EAQ[EP]S{M(Oxidation (M))|F};[AG]N[HN]EAQ[EP]S{M(Oxidation (M))|F};[HS][PG]DEA[AG]QNA{M(Oxidation (M))|F};[HS][PG]DEAQQGGA{M(Oxidation (M))|F} 5.8746;5.1722;5.1722;5.1722;4.8939;4.7668;4.6449;4.6157;4.1938;4.1938 -;-;-;-;-;-;-;-;-;- 649 1 1.909 39994.0 1.0 1927 3299 5226 DOHH2_400M_050219_2,5228 DOHH2_400M_050219_2,5228,SFARGCQPCAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5229 27.326 28.0 2633600.0 25 0 262970.0 + 41286 VPHTRPVSL 9 86 503.2957129512363 1004.5768729692726 2 503.2957946658134 MULTI CID FTMS 0 0 0 5226 2163882.5 0.2907193033320874 -2 0.1939945220947265 3 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 49.93300154707207 0.0405168250806675 2 VPHT 4 5 70.988 0.0 0.0 7.0664 0.0 0.0 0.0 567.3267305963499 567.3267305963499 59.20493553831305 0.0 0.0 0.0 0 0.7059771852360797 2.0 1.1989700043360187 0.0 + VPHT 7.0664 + + 109 + 1 1.909 58918.8 1.0 1928 3299 5226 DOHH2_400M_050219_2,5229 DOHH2_400M_050219_2,5229,VPHTRPVSL True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5230 27.328 72.0 774150.0 25 0 112340.0 + 6321 DVIQKGSSL 9 75 473.7640557110109 945.5135584888218 2 473.7640563845634 MULTI CID FTMS 0 0 0 5226 564363.0 0.6849734713160691 -1 0.111368179321289 4 Unmodified _DVIQKGSSL_ ENSG00000130695|ENST00000451429|CEP85;nc|ENSG00000130695|Q6P2H3|CEP85 60.07390631473393 0.0260411565414776 2 [DV]{I|L}Q 4 5 44.609 0.0 0.0 4.718 0.0 0.0 0.0 487.2525868987943 487.2525868987943 22.614393726401687 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.3807196863200844 + [DV]{I|L}Q 4.718 + + 219 + 1 1.909 48187.0 1.0 1929 3299 5226 DOHH2_400M_050219_2,5230 DOHH2_400M_050219_2,5230,DVIQKGSSL True True DVIQKGSSL 27.328006 473.764056384563 4640225.5 5226.0 ENSG00000130695|ENST00000451429|CEP85;;nc|ENSG00000130695|Q6P2H3|CEP85 4.28816556930542 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5231 27.33 98.0 422480.0 25 0 31555.0 + 37946 TMDNPTTTQY 10 73 586.2500904841656 1170.4856280351312 2 586.2506591677666 MULTI CID FTMS 0 0 0 5226 522865.40625 0.468027606191236 1 -0.1137771606445312 5 Unmodified _TMDNPTTTQY_ ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF 24.99096001346401 0.4071966087057876 2 [MT]DN 4 6 30.406 0.0 0.0 2.5977 0.0 0.0 0.0 706.303199406478 706.303199406478 3.199849938126889 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + [MT]DN 2.5977 + + 54 1 1.909 39829.3 1.0 1930 3299 5226 DOHH2_400M_050219_2,5231 DOHH2_400M_050219_2,5231,TMDNPTTTQY False True TMDNPTTTQY 27.330156 586.250659167767 16423394.0 5226.0 ENSG00000125971|ENST00000357156|DYNLRB1;;ENST00000480759.1_1_20:33117938-33128425:+|nuORF 7.308612823486328 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5232 27.339 482.0 494860.0 25 0 128530.0 + 30601 REWNRDVQY 9 101 633.3047347416319 0 633.3046752810478 PEAK CID FTMS 0 0 0 5226 479189.96875 1.0 0 0.0 6 Unmodified _REWNRDVQY_ ENSG00000153037|ENST00000505459|SRP19;ENST00000512790.5_1_5:112197073-112227301:+|nuORF;nc|ENSG00000153037|P09132-2|SRP19 78.06048673739656 0.0162889934409343 2 EVDRNWE 7 7 46.354 0.0 0.0 3.6655 0.0 0.0 180.08301579760297 153.07856165103752 333.1615774486405 0.0 0.0 0.0 0.0 0 1.4489700043360187 0.0 0.3807196863200844 1.305462187404089 EVDRNWE 3.6655 - 514 + 1 1.909 175940.5 1.0 1931 3299 5226 DOHH2_400M_050219_2,5232 DOHH2_400M_050219_2,5232,REWNRDVQY True True REWNRDVQY 27.338692 633.304675281048 2561397.0 5226.0 nc|ENSG00000153037|P09132-2|SRP19;;ENST00000512790.5_1_5:112197073-112227301:+|nuORF;;ENSG00000153037|ENST00000505459|SRP19 8.405748844146729 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5233 27.341 107.0 564990.0 25 0 69724.0 + 36899 TEQPPPRSW 9 82 549.2724238958491 1096.530294858498 2 549.2725097537041 MULTI CID FTMS 0 0 0 5226 411645.21875 0.9005379034549369 3 -0.2874031066894531 7 Unmodified _TEQPPPRSW_ ENSG00000113300|ENST00000261951|CNOT6 41.95555342248728 0.0647214845423414 2 {[ET]|[MV]}QPP[WR][PS] 9 2 + 36.871 0.0 0.0 3.3625 3.3625 77.762 0.0 0.0 0.0 0.0 0.0 0.0 9.208187539523747 0 0.5 0.0 0.7215141619232908 0.805462187404089 {[ET]|[MV]}QPP[WR][PS];{[DS]|[MA]|[CV]|TT}[WR]PP[AG][DP];{[ET]|[MV]}[WK]P[HA][QT];{[DS]|[MA]|[CV]|TT}[WR]P[HA][QT] 3.3625;2.5228;0.69719;0.65108 -;-;-;- 102 + 1 1.909 51178.7 1.0 1932 3299 5226 DOHH2_400M_050219_2,5233 DOHH2_400M_050219_2,5233,TEQPPPRSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5234 27.343 87.0 1197600.0 25 0 330010.0 19621 LGDMIWEDL 9 86 546.2580105789477 1090.5014682246954 2 546.2582275271416 MULTI CID FTMS 0 0 0 5226 382876.625 0.9518249799237408 -2 0.1939945220947265 8 Unmodified _LGDMIWEDL_ ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10 12.531546534597751 0.4974689918368763 2 D 1 8 14.49 0.0 0.0 1.3287 0.0 0.0 358.12092730848286 614.3285765020785 972.4495038105612 0.0 0.0 0.0 0.0 0 0.75 0.0 0.0 0.0 + D 1.3287 + + 66 + 1 1.909 83147.0 1.0 1933 3299 5226 DOHH2_400M_050219_2,5234 DOHH2_400M_050219_2,5234,LGDMIWEDL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5235 27.353 559.0 571470.0 25 0 37060.0 + 38456 TSDDVKEQIY 10 189 599.285144557565 1196.55573618193 2 599.2849609255791 MULTI CID FTMS 0 0 0 5226 373543.5625 0.0590386129930492 -2 0.1939945220947265 9 Unmodified _TSDDVKEQIY_ ENSG00000110700|ENST00000525634|RPS13;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000534329.1_1_11:17098694-17099257:-|nuORF 154.7525637096362 1.897774441840115e-05 2 {[MG]|[TS]}DDVRTQ{I|L}Y 10 2 + 89.709 0.0 0.0 7.4973 7.4973 84.659 0.0 0.0 0.0 7.626656038284452 44.03288224538557 7.626656038284452 3.4691001300805624 0 2.7302046884880937 0.0 2.758864383480216 0.3494850021680094 {[MG]|[TS]}DDVRTQ{I|L}Y;{[MG]|[TS]}DDVKEQ{I|L}Y;{[MG]|[TS]}DDVRQT{I|L}Y;{[MG]|[TS]}DDVKQE{I|L}Y;{[MG]|[TS]}DDVVGTQ{I|L}Y;{[MG]|[TS]}DDVRT[AG]{I|L}Y;{[MG]|[TS]}DDVKE[AG]{I|L}Y;DDSTVKEQ{I|L}Y;{[MG]|[TS]}DDVVGQT{I|L}Y;{[DS]|[MA]|[CV]|TT}TDVKEQ{I|L}Y 7.4973;7.2074;7.0319;6.913;6.8513;6.7314;6.4415;6.4302;6.386;6.348 -;+;-;-;-;-;-;-;-;- + 33397 1 1.909 230952.4 1.0 1934 3299 5226 DOHH2_400M_050219_2,5235 DOHH2_400M_050219_2,5235,TSDDVKEQIY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5236 27.356 151.0 821380.0 25 0 80751.0 + 33144 SEVILHHEY 9 133 563.781075695229 1125.547598457258 2 563.7797119021416 MULTI CID FTMS 0 0 0 5226 330398.75 0.1358572071205235 -1 0.111368179321289 10 Unmodified _SEVILHHEY_ ENSG00000144028|ENST00000323853|SNRNP200 67.83816525789305 0.0219346420158844 2 {[TV]|[{I|L}S]}D{I|L}{I|L}H[KC]D 9 5 57.505 0.0 0.0 5.1091 0.0 0.0 0.0 98.02546869449452 98.02546869449452 22.314927287557616 0.0 0.0 0.0 0 1.5994850021680094 0.5228787452803376 1.0902280322290656 0.0 {[TV]|[{I|L}S]}D{I|L}{I|L}H[KC]D 5.1091 - 950 + 1 1.909 95752.8 1.0 1935 3299 5226 DOHH2_400M_050219_2,5236 DOHH2_400M_050219_2,5236,SEVILHHEY True True SEVILHHEY 27.355744 563.779711902142 31003984.5 5226.0 ENSG00000144028|ENST00000323853|SNRNP200 8.294488747914633 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5237 27.367 654.0 645870.0 25 0 310970.0 -1 MNDCYSKLKE 10 141 644.2906962578389 1286.5668395824778 2 644.2911254763603 MULTI CID FTMS 0 0 0 5226 281603.03125 1.0 0 0.0 11 Carbamidomethyl (C) _MNDC(Carbamidomethyl (C))YSKLKE_ ENSG00000115738|ENST00000396290|ID2;ENST00000462623.1_1_3:62109880-62110168:-|nuORF 18.1463463914782 0.5430639438673815 2 [MN]PN{I|L}NADQ[RD] 11 -1 + 86.348 0.0 0.0 6.7115 6.7115 80.273 0.0 0.0 0.0 24.35728569561438 1.6633142176652598 1.6633142176652598 1.6633142176652598 0 0.7614393726401688 1.6989700043360187 0.566901560044258 1.555462187404089 [MN]PN{I|L}NADQ[RD];[MN]PN{I|L}NADDRQ;[MN]PN{I|L}NWQ[RD];[MN]PN{I|L}NWDRQ;[MN]PN{I|L}NAD[HV]Y;[MN]PNN{I|L}ADQ[RD];[MN]PN{I|L}GGADQ[RD];[MN]PN{I|L}NAD[AG][RD];[MN]PGG{I|L}NADQ[RD];[MN]PNN{I|L}ADDRQ 6.7115;6.5822;6.4344;6.3051;6.0736;6.0105;6.002;6.002;6.002;5.8813 -;-;-;-;-;-;-;-;-;- 1920 + 1 1.909 301814.7 1.0 1936 3299 5226 DOHH2_400M_050219_2,5237 DOHH2_400M_050219_2,5237,MNDCYSKLKE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5238 27.372 262.0 522870.0 25 0 75570.0 + + 22396 AMKPKPLSV 9 113 485.2535555767599 968.4925582203198 2 485.7915832400322 MULTI CID FTMS 0 0 0 5226 29925.650390625 0.0064797732920322 12 -0.8660392761230469 12 Unmodified _LPSTSASAHV_ ENSG00000115760|ENST00000421745|BIRC6 15.847184025352805 0.5816416552707754 2 KPK[{I|L}P]SV 7 -1 35.723 0.0 0.0 3.6885 0.0 0.0 201.0000112321282 0.0 201.0000112321282 0.0 15.03669175573954 0.0 0.0 0 0.0 0.0 0.9049471895720984 0.75 KPK[{I|L}P]SV 3.6885 - 366 + 1 1.909 108305.0 1.0 1937 3299 5226 DOHH2_400M_050219_2,5238 DOHH2_400M_050219_2,5238,LPSTSASAHV False False AMKPKPLSV 27.37199 485.791583240032 2083091.0 5226.0 ENSG00000115760|ENST00000421745|BIRC6 6.588706175486247 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5239 27.377 271.0 1287200.0 25 0 85048.0 + 9088 FFGSNLPDYQ 10 165 594.2694836988851 0 594.2698242068291 PEAK CID FTMS 0 0 0 5226 235459.375 1.0 0 0.0 13 Unmodified _FFGSNLPDYQ_ ENSG00000132294|ENST00000254624|EFR3A;nc|ENSG00000132294|Q14156-2|EFR3A;nc|ENSG00000132294|Q14156-3|EFR3A 43.77239144664712 0.0832498809322189 2 ENYQEE 6 9 47.321 0.0 0.0 3.9882 0.0 0.0 309.13948090346736 82.06705652408436 391.2065374275517 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 1.9894053504650309 1.079689690656103 ENYQEE 3.9882 - 2777 + 1 1.909 252668.0 1.0 1938 3299 5226 DOHH2_400M_050219_2,5239 DOHH2_400M_050219_2,5239,FFGSNLPDYQ True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5240 27.381 238.0 475720.0 25 0 44234.0 + 555 AEIEKLGQKY 10 120 393.5519609109104 1177.6340533329312 3 393.5516540408134 MULTI CID FTMS 0 0 0 5226 203187.25 1.0 0 0.0 14 Unmodified _AEIEKLGQKY_ ENSG00000119616|ENST00000341162|FCF1 24.95707706330732 0.4079579053029958 2 {[CP]|[EA]}{I|L}EK{I|L}{[QG]|[NA]}KY 10 0 + 31.502 0.0 0.0 2.6751 2.6751 71.63 0.0 0.0 0.0 11.07941311071844 3.5654732351381213 3.5654732351381213 5.568109453757657 0 0.7302046884880937 0.0 0.0 0.0 + + {[CP]|[EA]}{I|L}EK{I|L}{[QG]|[NA]}KY;{[CP]|[EA]}{I|L}EK[DV]V{I|L}Y 2.6751;2.2022 +;- + 200 + 1 1.909 93807.8 1.0 1939 3299 5226 DOHH2_400M_050219_2,5240 DOHH2_400M_050219_2,5240,AEIEKLGQKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5241 27.397 800.0 81862.0 25 0 6980.0 -1 RAWDMRYYMNQ 11 82 775.3371312937586 1548.659709654317 2 775.8359252810478 MULTI CID FTMS 0 0 0 5226 129937.8046875 0.025814213332132 6 -0.5052490234375 15 Oxidation (M) _RAWDM(Oxidation (M))RYYMNQ_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF;ENST00000591149.5_1_19:2807001-2808381:+|nuORF 1.3295316138638542 0.8688751186870782 2 EADQA[HD]{M(Oxidation (M))|F}YQ 10 -1 57.752 0.0 0.0 3.7292 0.0 0.0 326.1656632431187 0.0 326.1656632431187 0.0 43.28386162270782 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.805462187404089 EADQA[HD]{M(Oxidation (M))|F}YQ 3.7292 - 4268 + 1 1.909 51092.9 0.7699999809265137 1940 3299 5226 DOHH2_400M_050219_2,5241 DOHH2_400M_050219_2,5241,RAWDMRYYMNQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5242 27.41 800.0 99768.0 25 0 8806.3 -1 IYEHECFQEE 10 85 692.2781860232353 0 692.2781860232353 PEAK CID FTMS 0 0 0 -1 0 16 Carbamidomethyl (C) _IYEHEC(Carbamidomethyl (C))FQEE_ ENSG00000169592|ENST00000563197|INO80E;ENST00000380503.7_1_16:30007553-30007939:+|nuORF;ENST00000563040.5_1_16:30007580-30010601:+|nuORF;nc|ENSG00000169592|Q8NBZ0-2|INO80E 10.073929032068715 0.3742530088597855 2 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 2 -1 4.464 0.0 0.0 0.32288 0.0 0.0 760.7886865216811 324.6257418268188 1085.4144283485 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 0.32288 - 12 + 1 1.909 63142.1 0.7900000214576721 1941 3299 5226 DOHH2_400M_050219_2,5242 DOHH2_400M_050219_2,5242,IYEHECFQEE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5243 27.424 800.0 350240.0 25 0 47527.0 + -1 PHTRPVSL 8 205 454.2629611295151 906.5113693258302 2 454.2620422244072 MULTI CID FTMS 0 0 0 5226 87170.0 0.5704049665867803 -2 0.1939945220947265 17 Oxidation (M) _TTLM(Oxidation (M))LLSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 8.593279151180031 0.7721714526254883 2 HT 2 -1 20.459 0.0 0.0 2.2569 0.0 0.0 98.05491680248458 567.3297837218648 665.3847005243495 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.75 0.0 HT 2.2569 - 403 + 1 1.909 217024.4 0.6600000262260437 1942 3299 5226 DOHH2_400M_050219_2,5243 DOHH2_400M_050219_2,5243,TTLMLLSL False False PHTRPVSL 27.42415 454.262042224407 1393307.625 5226.0 ENST00000412609.5_1_19:40170059-40174276:+|nuORF 2.517966111501058 2.0 False 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 5244 27.427 86.0 646120.0 25 0 133170.0 + 28171 PPTAVGPP 8 80 368.2066645425483 0 368.2069579958916 PEAK CID FTMS 0 0 0 5226 742532.8125 0.2949373558892514 5 -0.446542739868164 18 Unmodified _PPTAVGPP_ REV__ENSG00000125686|ENST00000300651|MED1 6.354104778181461 0.5763711549229614 2 E 1 -1 5.4846 0.0 0.0 0.74681 0.0 0.0 94.0329447083404 508.30048547916255 602.3334301875029 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.74681 - 8 + 1 1.909 53164.4 1.0 1943 3299 5226 DOHH2_400M_050219_2,5244 DOHH2_400M_050219_2,5244,PPTAVGPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5245 27.431 187.0 560970.0 25 0 77730.0 -1 0 88 429.2343256120602 428.2270491454602 1 429.2326232790947 MULTI CID FTMS 0 0 0 5226 353930.375 1.0 0 0.0 19 2 Y 1 -1 10.596 0.0 0.0 2.4744 0.0 0.0 247.15243169116172 0.0 247.15243169116172 0.0 1.3877444990722942 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.4744 - 10 + 1 1.909 87833.6 1.0 1944 3299 5226 DOHH2_400M_050219_2,5245 DOHH2_400M_050219_2,5245, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5246 27.433 96.0 747390.0 25 0 70939.0 + 34683 AENVPASKF 9 97 481.7507327196169 0 481.7505981326103 PEAK CID FTMS 0 0 0 5226 265610.46875 1.0 0 0.0 20 Unmodified _SPSPLHEPV_ nc|ENSG00000107036|Q4ADV7-3|RIC1;nc|ENSG00000107036|Q4ADV7-2|RIC1;ENSG00000107036|ENST00000414202|RIC1 20.453626601364224 0.1969592619112565 2 DPT 3 8 15.222 0.0 0.0 1.5831 0.0 0.0 156.09068555466507 489.2482699029906 645.3389554576557 0.0 0.0 0.0 0.0 0 0.2302046884880938 0.0 0.4247425010840047 0.0 DPT 1.5831 - 107 + 1 1.909 60549.6 1.0 1945 3299 5226 DOHH2_400M_050219_2,5246 DOHH2_400M_050219_2,5246,SPSPLHEPV False False AENVPASKF 27.432914 481.75059813261 1937861.25 5226.0 nc|ENSG00000107036|Q4ADV7-3|RIC1;;nc|ENSG00000107036|Q4ADV7-2|RIC1;;ENSG00000107036|ENST00000414202|RIC1 0.7145136197408041 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5248 27.441 258.0 483780.0 25 0 54376.0 -1 LTCNSDGEWVY 11 127 448.5247830030268 1342.5525196092804 3 448.5247985720634 MULTI CID FTMS 0 0 0 5247 425144.15625 0.9010944983254598 -1 0.1137771606445312 1 Carbamidomethyl (C) _LTC(Carbamidomethyl (C))NSDGEWVY_ ENSG00000123838|ENST00000367070|C4BPA 4.406150317652783 0.8543594311449257 2 {I|L}K[Y{I|L}]TY 6 -1 32.664 0.0 0.0 2.433 0.0 0.0 543.1056334782241 0.0 543.1056334782241 0.0 20.67410004652736 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}K[Y{I|L}]TY 2.433 - 285 + 1 1.888 99930.3 1.0 1946 3300 5247 DOHH2_400M_050219_2,5248 DOHH2_400M_050219_2,5248,LTCNSDGEWVY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5249 27.442 35.0 1177600.0 25 0 159020.0 + 15979 ITDKNSLAY 9 75 512.7691147741095 1023.5236766150192 2 512.7692748904228 MULTI CID FTMS 0 0 0 5247 1541059.875 1.0 0 0.0 2 Unmodified _ITDKNSLAY_ ENSG00000163510|ENST00000410053|CWC22 31.26834338654808 0.1333407332142048 2 {I|L}T 2 7 38.188 0.0 0.0 3.731 0.0 0.0 0.0 806.3707369440061 806.3707369440061 12.971062485323516 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + {I|L}T 3.731 + + 97 + 1 1.888 36171.8 1.0 1947 3300 5247 DOHH2_400M_050219_2,5249 DOHH2_400M_050219_2,5249,ITDKNSLAY False True ITDKNSLAY 27.442187 512.769274890423 7974258.0 5247.0 ENSG00000163510|ENST00000410053|CWC22 5.649247010548909 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5250 27.443 46.0 1097500.0 25 0 76598.0 + 27996 PMGPPPVSTPL 11 87 364.8634471938584 1091.568512181775 3 364.8633911013603 MULTI CID FTMS 0 0 0 5247 1048363.625 0.5888331947415438 -1 0.1137771606445312 3 Unmodified _PMGPPPVSTPL_ REV__ENSG00000119596|ENST00000325680|YLPM1 19.256988751693697 0.6345794173041263 2 MPTP{I|L} 5 -1 29.648 0.0 0.0 2.7161 0.0 0.0 534.2814198224625 0.0 534.2814198224625 0.0 9.47112801755864 0.0 0.0 0 0.718765315847925 0.0 0.3252574989159953 0.0 MPTP{I|L} 2.7161 - 179 1 1.888 53825.9 1.0 1948 3300 5247 DOHH2_400M_050219_2,5250 DOHH2_400M_050219_2,5250,PMGPPPVSTPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5251 27.445 52.0 1163200.0 25 0 143170.0 + 33146 SEVILHHEY 9 89 376.188616531703 1125.544020195309 3 376.1884033083916 MULTI CID FTMS 0 0 0 5247 892417.375 1.0 0 0.0 4 Unmodified _SEVILHHEY_ ENSG00000144028|ENST00000323853|SNRNP200 31.26834338654808 0.1333407332142048 2 {[TV]|[{I|L}S]}[C(Carbamidomethyl (C))S]H{I|L}{I|L} 7 6 23.09 0.0 0.0 2.0515 0.0 0.0 0.0 312.1211923657235 312.1211923657235 10.325878518657523 0.0 0.0 0.0 0 0.0 0.0 1.0114393726401687 0.0 {[TV]|[{I|L}S]}[C(Carbamidomethyl (C))S]H{I|L}{I|L} 2.0515 - 127 1 1.888 57629.8 1.0 1949 3300 5247 DOHH2_400M_050219_2,5251 DOHH2_400M_050219_2,5251,SEVILHHEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5252 27.446 61.0 991450.0 25 0 98999.0 + 38033 TPCPTAPVPPL 11 93 546.7916571732784 1091.5687614133567 2 546.7917358279228 MULTI CID FTMS 0 0 0 5247 829051.3125 0.6409244453669887 -1 0.1137771606445312 5 Unmodified _TPCPTAPVPPL_ REV__ENSG00000100167|ENST00000644076|SEPTIN3;REV__ENST00000396425.7_1_22:42392830-42392968:+|nuORF;REV__nc|ENSG00000100167|Q9UH03|SEPTIN3 26.268140514670165 0.4754186812857754 2 [TP]MK{[QD]|[EN]|[WG]|[KD]|[RS]}YP{I|L} 9 -1 + 67.195 0.0 0.0 6.1558 6.1558 90.879 0.0 0.0 0.0 15.939331571828816 9.291746928241125 9.291746928241125 15.939331571828816 0 2.2264696010398595 2.0 0.7059771852360797 0.0 [TP]MK{[QD]|[EN]|[WG]|[KD]|[RS]}YP{I|L};TP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QV]|[N{I|L}]|[RA]|[KV]}YP{I|L};[TP][YK][NP]YP{I|L};[TP][YK]AAMTP{I|L};[TP][YK]{[WS]|[C(Carbamidomethyl (C)){I|L}]}TP{I|L};{[VA]|[{I|L}G]}WT[HA]PTP{I|L};[TP][YK]K[MD]P{I|L};KK{[YD]|[{M(Oxidation (M))|F}M]}MPTP{I|L};{[VA]|[{I|L}G]}WT{[QD]|[EN]|[WG]|[KD]|[RS]}YP{I|L};[TP][YK]AAMPT{I|L} 6.1558;4.6956;4.3599;4.3337;4.2869;3.964;3.6465;3.6362;3.4385;3.3019 -;-;-;-;-;-;-;-;-;- 422 1 1.888 51180.5 1.0 1950 3300 5247 DOHH2_400M_050219_2,5252 DOHH2_400M_050219_2,5252,TPCPTAPVPPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5253 27.449 112.0 912790.0 25 0 185640.0 + 39947 VGAFGGRH 8 91 400.7133296540379 799.4121063748759 2 400.7128784060478 MULTI CID FTMS 0 0 0 5247 689107.125 0.5828972680620896 -1 0.1137771606445312 6 Unmodified _VGAFGGRH_ REV__ENSG00000185105|ENST00000409745|MYADML2 0.7936320650641473 0.8195151834710337 2 YV 2 -1 41.211 0.0 0.0 5.1552 0.0 0.0 0.0 534.2583004873767 534.2583004873767 21.26287494579977 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 YV 5.1552 - 167 + 1 1.888 86476.7 1.0 1951 3300 5247 DOHH2_400M_050219_2,5253 DOHH2_400M_050219_2,5253,VGAFGGRH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5254 27.45 71.0 583480.0 25 0 78213.0 + 32861 SEHQPTTW 8 66 493.22267505575104 984.430797178302 2 493.2223388552666 MULTI CID FTMS 0 0 0 5247 524797.4375 1.0 0 0.0 7 Unmodified _SEHQPTTW_ ENSG00000134910|ENST00000392708|STT3A;ENSG00000163527|ENST00000295770|STT3B;ENST00000423527.5_1_3:31574490-31661461:+|nuORF;ENST00000436236.1_1_3:31638325-31661336:+|nuORF;ENST00000526726.1_1_11:125479363-125482632:+|nuORF;ENST00000531001.1_1_11:125478078-125479612:+|nuORF;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;nc|ENSG00000134910|P46977-2|STT3A 12.531546534597751 0.7257836412119636 2 TW 2 6 17.959 0.0 0.0 1.8243 0.0 0.0 679.2923827269334 0.0 679.2923827269334 0.0 4.837425177946455 0.0 0.0 0 0.0 0.0 0.0 0.0 + TW 1.8243 + + 64 + 1 1.888 36698.3 1.0 1952 3300 5247 DOHH2_400M_050219_2,5254 DOHH2_400M_050219_2,5254,SEHQPTTW False True SEHQPTTW 27.45031 493.222338855267 2927829.0 5247.0 ENST00000531001.1_1_11:125478078-125479612:+|nuORF;;ENST00000423527.5_1_3:31574490-31661461:+|nuORF;;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;;ENSG00000163527|ENST00000295770|STT3B;;ENST00000526726.1_1_11:125479363-125482632:+|nuORF;;nc|ENSG00000134910|P46977-2|STT3A;;ENST00000436236.1_1_3:31638325-31661336:+|nuORF;;ENSG00000134910|ENST00000392708|STT3A 4.028616706530253 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5255 27.453 152.0 359170.0 25 0 19657.0 + 25419 NEDEDSPNKLY 11 91 662.2892705492113 1322.5639881652226 2 662.2892333865166 MULTI CID FTMS 0 0 0 5247 448421.9375 0.3415683764594045 -2 0.2251453399658203 8 Unmodified _NEDEDSPNKLY_ ENSG00000071082|ENST00000264258|RPL31;ENST00000480540.1_1_14:59261390-59261744:+|nuORF;nc|ENSG00000071082|P62899-2|RPL31;nc|ENSG00000071082|P62899-3|RPL31 78.61045856554632 0.0086900212848084 2 {[QD]|[EN]|[WG]|[KD]|[RS]}DE[C(Carbamidomethyl (C))Q][RP]{I|L}Y 10 4 + 51.743 0.0 0.0 3.9123 3.9123 77.528 0.0 0.0 0.0 8.137408290787818 27.512510508524542 8.137408290787818 8.5693557637142 0 1.8807196863200843 0.0 1.055462187404089 0.6237125054200234 {[QD]|[EN]|[WG]|[KD]|[RS]}DE[C(Carbamidomethyl (C))Q][RP]{I|L}Y;{[QN]|[E{I|L}]|[KN]}P{I|L}C(Carbamidomethyl (C))[NG]D{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{[QN]|[E{I|L}]|[KN]}PSW[NG]D{[QD]|[EN]|[WG]|[KD]|[RS]}Y;[NP]KSW[NG]D{[QD]|[EN]|[WG]|[KD]|[RS]}Y;[NP]K{I|L}C(Carbamidomethyl (C))[NG]D{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{[QN]|[E{I|L}]|[KN]}P{I|L}[HM]C(Carbamidomethyl (C)){[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y;[NP]K{I|L}[HM]C(Carbamidomethyl (C)){[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NE[C(Carbamidomethyl (C))Q][RP]{I|L}Y;{[QN]|[E{I|L}]|[KN]}P{I|L}C(Carbamidomethyl (C))[HM]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y;[NP]K{I|L}C(Carbamidomethyl (C))[HM]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y 3.9123;3.2644;3.0368;2.9962;2.9778;2.9562;2.9156;2.5139;2.0294;1.9888 -;-;-;-;-;-;-;-;-;- 510 1 1.888 46857.6 1.0 1953 3300 5247 DOHH2_400M_050219_2,5255 DOHH2_400M_050219_2,5255,NEDEDSPNKLY True True NEDEDSPNKLY 27.453347 662.289233386517 19445598.0 5247.0 ENST00000480540.1_1_14:59261390-59261744:+|nuORF;;ENSG00000071082|ENST00000264258|RPL31;;nc|ENSG00000071082|P62899-3|RPL31;;nc|ENSG00000071082|P62899-2|RPL31 8.238649527231852 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5256 27.457 169.0 634940.0 25 0 32632.0 + 41732 VPSVSTATL 9 114 437.74814517732784 873.4817374214557 2 437.7478515505791 MULTI CID FTMS 0 0 0 5247 255827.90625 0.9718206781869432 -1 0.1137771606445312 9 Unmodified _VPSVSTATL_ REV__ENST00000608290.1_1_22:46409584-46410459:+|nuORF 42.09456458481378 0.0639583784996157 2 VPSV 4 -1 62.964 0.0 0.0 7.2084 0.0 0.0 0.0 488.2406710260376 488.2406710260376 48.64532253365263 0.0 0.0 0.0 0 0.6421590589602533 2.0 0.8494850021680094 0.0 VPSV 7.2084 + + 460 + 1 1.888 89830.2 1.0 1954 3300 5247 DOHH2_400M_050219_2,5256 DOHH2_400M_050219_2,5256,VPSVSTATL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5257 27.462 289.0 341680.0 25 0 27980.0 + 13075 HEAERNIAL 9 114 526.7789045443523 0 526.7797119021416 PEAK CID FTMS 0 0 0 5247 211576.28125 1.0 0 0.0 10 Unmodified _HEAERNIAL_ chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1;nc|ENSG00000196862|Q7Z3J3-2|RGPD4 51.629811660486645 0.0272106947810716 2 E{I|L} 2 7 16.088 0.0 0.0 1.53 0.0 0.0 137.05963230160506 669.3303927057249 806.39002500733 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.25 0.0 E{I|L} 1.53 - 164 + 1 1.888 76481.6 1.0 1955 3300 5247 DOHH2_400M_050219_2,5257 DOHH2_400M_050219_2,5257,HEAERNIAL True True HEAERNIAL 27.461972 526.779711902142 1139265.625 5247.0 ENSG00000153201|ENST00000283195|RANBP2;;ENSG00000153165|ENST00000409886|RGPD3;;nc|ENSG00000183054|Q99666-2|RGPD5;;ENSG00000169629|ENST00000302558|RGPD8;;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;;ENSG00000015568|ENST00000016946|RGPD5;;ENSG00000185304|ENST00000398146|RGPD2;;ENSG00000187627|ENST00000641458|RGPD1;;ENSG00000183054|ENST00000329516|RGPD6;;ENSG00000196862|ENST00000408999|RGPD4;;nc|ENSG00000187627|P0DJD0|RGPD1;;nc|ENSG00000196862|Q7Z3J3-2|RGPD4 5.533341884613037 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5258 27.476 800.0 139940.0 25 0 10353.0 + -1 IHCYARQCYYQ 11 113 781.3370597356642 1560.6595665381285 2 781.3367187380791 MULTI CID FTMS 0 0 0 5247 180007.953125 1.0 0 0.0 11 2 Carbamidomethyl (C) _IHC(Carbamidomethyl (C))YARQC(Carbamidomethyl (C))YYQ_ REV__ENSG00000165416|ENST00000310528|SUGT1;REV__ENST00000607588.1_1_13:52743381-52745380:-|nuORF;REV__nc|ENSG00000165416|Q9Y2Z0|SUGT1 17.11289562659939 0.6791789249425932 2 [NP]HDEAQQNA{M(Oxidation (M))|F}YQ 13 -1 + 94.744 0.0 0.0 6.0708 6.0708 83.33 0.0 0.0 0.0 0.4403213058795074 85.28006364682096 0.4403213058795074 6.020599913279625 0 0.9247425010840048 0.0 0.0 1.2302046884880935 [NP]HDEAQQNA{M(Oxidation (M))|F}YQ;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}YQ;[NP]HDEA[AG]QNA{M(Oxidation (M))|F}YQ;[NP]HDEAQQGGA{M(Oxidation (M))|F}YQ;[NP]HDEAQ[AG]NA{M(Oxidation (M))|F}YQ;{[MS]|[{M(Oxidation (M))|F}A]}GGMEAQQNA{M(Oxidation (M))|F}YQ;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQ[AG]NA{M(Oxidation (M))|F}YQ;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQGGA{M(Oxidation (M))|F}YQ;{[MS]|[{M(Oxidation (M))|F}A]}NMEA[AG]QNA{M(Oxidation (M))|F}YQ 6.0708;5.685;5.4921;5.4894;5.4894;5.4894;5.1037;5.1037;5.1037;5.1037 -;-;-;-;-;-;-;-;-;- 1760 1 1.888 81477.0 0.9700000286102296 1956 3300 5247 DOHH2_400M_050219_2,5258 DOHH2_400M_050219_2,5258,IHCYARQCYYQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5259 27.49 799.0 290130.0 25 0 14372.0 + 42379 VTDPEKLNNY 10 194 596.7959558709654 1191.5773588087309 2 596.7951537966728 MULTI CID FTMS 0 0 0 5247 153648.25 0.0849620679997356 -3 0.3077716827392578 12 Unmodified _VTDPEKLNNY_ ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L 114.18643581695662 0.001143558078943 2 VTDP[C(Carbamidomethyl (C))H]KK 8 6 71.539 0.0 0.0 6.0037 0.0 0.0 0.0 223.07317529849848 223.07317529849848 30.888086456939945 0.0 0.0 0.0 0 0.75 1.6989700043360187 0.0 1.7179001828205482 VTDP[C(Carbamidomethyl (C))H]KK 6.0037 - 8881 + 1 1.888 169128.3 1.0 1957 3300 5247 DOHH2_400M_050219_2,5259 DOHH2_400M_050219_2,5259,VTDPEKLNNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5260 27.501 636.0 304630.0 25 0 16229.0 + 7268 EESYSRMGY 9 189 561.2310331600183 0 561.2316161990166 PEAK CID FTMS 0 0 0 5247 267305.125 1.0 0 0.0 13 Unmodified _EESYSRMGY_ ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ 32.78568957990786 0.0971838787772021 2 ESYS 4 5 22.537 0.0 0.0 2.0114 0.0 0.0 129.03810284171783 522.2169548755107 651.2550577172285 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.2742275032520141 0.0 + ESYS 2.0114 + + 232 + 1 1.888 146219.4 1.0 1958 3300 5247 DOHH2_400M_050219_2,5260 DOHH2_400M_050219_2,5260,EESYSRMGY True True EESYSRMGY 27.500724 561.231616199017 1497730.25 5247.0 ENSG00000116560|ENST00000357214|SFPQ;;nc|ENSG00000116560|P23246-2|SFPQ 6.137583255767822 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5261 27.515 800.0 156750.0 25 0 12523.0 41608 VPPLTTKG 8 172 406.7474759524311 0 406.7474243044853 PEAK CID FTMS 0 0 0 5247 245059.125 1.0 0 0.0 14 Unmodified _VPPLTTKG_ ENSG00000157578|ENST00000288350|LCA5L 9.347437153973935 0.5488964601725408 2 Q 1 8 5.0886 0.0 0.0 0.62708 0.0 0.0 405.2644393542777 275.1399935358032 680.4044328900809 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 Q 0.62708 - 51 + 1 1.888 97141.1 1.0 1959 3300 5247 DOHH2_400M_050219_2,5261 DOHH2_400M_050219_2,5261,VPPLTTKG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5262 27.52 185.0 271620.0 25 0 31273.0 + 14170 IDEWRDLD 8 77 531.2469650793556 1060.4793772255111 2 531.2475463747978 MULTI CID FTMS 0 0 0 5247 190051.65625 1.0 0 0.0 15 Unmodified _IDEWRDLD_ REV__ENSG00000185915|ENST00000379499|KLHL34 34.10243960390752 0.3329570729325616 2 WWD{I|L}D 5 -1 25.234 0.0 0.0 2.3795 0.0 0.0 327.155077049025 0.0 327.155077049025 0.0 10.62977812912628 0.0 0.0 0 0.6989700043360187 0.0 0.3807196863200844 0.0 WWD{I|L}D 2.3795 - 47 1 1.888 46717.8 1.0 1960 3300 5247 DOHH2_400M_050219_2,5262 DOHH2_400M_050219_2,5262,IDEWRDLD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5263 27.524 226.0 575480.0 25 0 43323.0 -1 ITYGNECHLC 10 139 605.2560620900384 1208.4975712468768 2 605.2545654177666 MULTI CID FTMS 0 0 0 5247 139760.03125 0.1481131108184092 -1 0.1137771606445312 16 Carbamidomethyl (C) _ITYGNECHLC(Carbamidomethyl (C))_ ENSG00000145879|ENST00000274565|SPINK7 41.8396318013385 0.1381409678234242 2 {I|L}TEYQNE 7 -1 85.537 0.0 0.0 7.078 0.0 0.0 0.0 328.0925692193969 328.0925692193969 53.083653617485 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.045114016114533 1.610924374808178 {I|L}TEYQNE 7.078 - 941 + 1 1.888 97238.8 1.0 1961 3300 5247 DOHH2_400M_050219_2,5263 DOHH2_400M_050219_2,5263,ITYGNECHLC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5264 27.538 800.0 121290.0 25 0 9816.2 + 3507 CQNCETRWAF 10 126 629.2598364304831 1256.505119927766 2 629.2604858279228 MULTI CID FTMS 0 0 0 5247 105675.1640625 0.8928076699600164 -1 0.1137771606445312 17 Unmodified _CQNCETRWAF_ REV__ENSG00000182944|ENST00000397938|EWSR1;REV__ENST00000469669.5_1_22:29688055-29696148:+|nuORF;REV__ENST00000479135.5_1_22:29687437-29696148:+|nuORF;REV__ENST00000483629.5_1_22:29695128-29696148:+|nuORF;REV__nc|ENSG00000182944|Q01844-2|EWSR1;REV__nc|ENSG00000182944|Q01844-3|EWSR1;REV__nc|ENSG00000182944|Q01844-5|EWSR1;REV__nc|ENSG00000182944|Q01844-6|EWSR1 13.90604991867851 0.6142120002215601 2 ANQQAED[WM] 9 -1 71.961 0.0 0.0 5.727 0.0 0.0 165.07762093680736 0.0 165.07762093680736 0.0 50.91805264274505 0.0 0.0 0 0.9247425010840048 0.0 0.535666875892183 1.274227503252014 ANQQAED[WM] 5.727 - 559 + 1 1.888 75747.5 0.8100000023841858 1962 3300 5247 DOHH2_400M_050219_2,5264 DOHH2_400M_050219_2,5264,CQNCETRWAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5266 27.542 2.0 15103000.0 25 0 3302700.0 + 18567 LAALRAAAA 9 56 414.25840645872 826.50225998424 2 414.2587158083916 MULTI CID FTMS 0 0 0 5265 19868554.0 0.2323654640541539 2 -0.1541786193847656 1 Unmodified _LAALRAAAA_ REV__ENST00000308660.5_1_5:126253889-126366245:-|nuORF 23.1484247019978 0.2366544122328345 2 {I|L}AA 3 -1 48.94 0.0 0.0 5.9214 0.0 0.0 0.0 568.3209932916624 568.3209932916624 36.17595277211517 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}AA 5.9214 + + 8 + 1 1.875 29719.9 1.0 1963 3301 5265 DOHH2_400M_050219_2,5266 DOHH2_400M_050219_2,5266,LAALRAAAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5267 27.543 9.6 3273200.0 25 0 251910.0 1163 AHDEVAPFAL 10 64 535.26735980417 1068.52016667514 2 535.2675048708916 MULTI CID FTMS 0 0 0 5265 4192214.0 0.2075912522976484 2 -0.1541786193847656 2 Unmodified _AHDEVAPFAL_ ENST00000443339.5_1_3:9471730-9475758:+|nuORF 20.453626601364224 0.5043500229302764 2 QDT[WK]A{I|L} 7 7 43.448 0.0 0.0 4.0662 0.0 0.0 208.07950613002123 0.0 208.07950613002123 0.0 38.84388861894038 0.0 0.0 0 1.5 0.0 0.4247425010840047 0.0 QDT[WK]A{I|L} 4.0662 - 43 + 1 1.875 31502.6 1.0 1964 3301 5265 DOHH2_400M_050219_2,5267 DOHH2_400M_050219_2,5267,AHDEVAPFAL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5268 27.545 104.0 503830.0 25 0 46805.0 -1 SEFMFEEGSF 10 76 613.2389586883265 1224.463364443453 2 613.2389404177666 MULTI CID FTMS 0 0 0 5265 616877.125 1.0 0 0.0 3 Oxidation (M) _SEFM(Oxidation (M))FEEGSF_ ENSG00000103241|ENST00000262426|FOXF1;ENSG00000137273|ENST00000645481|FOXF2 6.2057823575117 0.6979311171683138 2 Y{[CA]|SS}C 4 -1 13.812 0.0 0.0 1.128 0.0 0.0 0.0 781.3081759088499 781.3081759088499 0.3174312876055296 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{[CA]|SS}C 1.128 - 26 + 1 1.875 46017.7 1.0 1965 3301 5265 DOHH2_400M_050219_2,5268 DOHH2_400M_050219_2,5268,SEFMFEEGSF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5269 27.547 81.0 760860.0 25 0 45162.0 19258 LEKFRKEQL 9 97 397.5680259049774 1189.6822483151325 3 397.5678283572197 MULTI CID FTMS 0 0 0 5265 489464.65625 1.0 0 0.0 4 Unmodified _LEKFRKEQL_ ENSG00000071205|ENST00000336498|ARHGAP10;ENST00000510379.1_1_4:148653338-148778808:+|nuORF 16.149105407346934 0.3995459350917656 2 P{I|L} 2 8 17.959 0.0 0.0 1.5095 0.0 0.0 961.5342971205996 0.0 961.5342971205996 0.0 8.667053245199625 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L} 1.5095 - 46 + 1 1.875 55153.7 1.0 1966 3301 5265 DOHH2_400M_050219_2,5269 DOHH2_400M_050219_2,5269,LEKFRKEQL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5270 27.549 102.0 442750.0 25 0 19442.0 + -1 LVCAPVNTL 9 88 493.77212414366767 0 493.7722656130791 PEAK CID FTMS 0 0 0 5265 460433.78125 1.0 0 0.0 5 Carbamidomethyl (C) _LVC(Carbamidomethyl (C))APVNTL_ REV__ENSG00000068489|ENST00000262293|PRR11 18.13498045792455 0.2189554373504223 2 NGVNR 5 -1 24.112 0.0 0.0 2.4466 0.0 0.0 232.14123122098616 210.08909021549064 442.23032143647686 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 NGVNR 2.4466 - 159 + 1 1.875 38192.1 1.0 1967 3301 5265 DOHH2_400M_050219_2,5270 DOHH2_400M_050219_2,5270,LVCAPVNTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5271 27.552 116.0 257260.0 25 0 59798.0 11336 GFFGTGEC 8 45 409.1610367815233 0 409.1609374880791 PEAK CID FTMS 0 0 0 5265 461817.28125 1.0 0 0.0 6 Unmodified _GFFGTGEC_ ENSG00000162065|ENST00000646147|TBC1D24;nc|ENSG00000162065|Q9ULP9-2|TBC1D24 2.577480529830294 0.5910327097116076 2 D 1 8 6.5938 0.0 0.0 0.80776 0.0 0.0 408.08222432269497 290.1683443658813 698.2505686885763 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 D 0.80776 - 3 + 1 1.875 32323.1 1.0 1968 3301 5265 DOHH2_400M_050219_2,5271 DOHH2_400M_050219_2,5271,GFFGTGEC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5272 27.557 275.0 429280.0 25 0 56445.0 + 6072 DSNGKPADAVY 11 102 568.7658999025576 1135.5172468719152 2 568.7655517458916 MULTI CID FTMS 0 0 0 5265 322496.1875 0.6656518795599627 -1 0.1048622131347656 7 Unmodified _DSNGKPADAVY_ ENSG00000145907|ENST00000356245|G3BP1;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1 20.41453444215458 0.6105011870913812 2 {[TV]|[{I|L}S]}[HM]V{[C(Carbamidomethyl (C))G]|[NC]}AVY 10 7 + 38.86 0.0 0.0 3.4222 3.4222 70.57 0.0 0.0 0.0 7.155692661554802 12.429254327622807 7.155692661554802 3.081144737610863 0 0.8494850021680094 1.154901959985743 1.305462187404089 0.2742275032520141 {[TV]|[{I|L}S]}[HM]V{[C(Carbamidomethyl (C))G]|[NC]}AVY;{[TV]|[{I|L}S]}[HM]V[C(Carbamidomethyl (C))Q]VY;[NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{[C(Carbamidomethyl (C))G]|[NC]}AVY;[NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[C(Carbamidomethyl (C))Q]VY;[NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))R]AVY 3.4222;3.1509;2.7921;2.5207;1.9478 -;-;-;-;- 220 1 1.875 94567.3 1.0 1969 3301 5265 DOHH2_400M_050219_2,5272 DOHH2_400M_050219_2,5272,DSNGKPADAVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5273 27.562 277.0 169160.0 25 0 14885.0 -1 AEMAEDPRVMY 11 95 672.2839017755534 1342.5532506179068 2 672.2836181521416 MULTI CID FTMS 0 0 0 5265 290775.15625 0.8646030236744512 1 -0.0687637329101562 8 2 Oxidation (M) _AEM(Oxidation (M))AEDPRVM(Oxidation (M))Y_ ENST00000549470.5_1_12:90689237-90693985:+|nuORF 7.608950283845883 0.8392484121837455 2 C(Carbamidomethyl (C))AEEY 5 -1 39.464 0.0 0.0 2.9395 0.0 0.0 672.316698142775 0.0 672.316698142775 0.0 26.176582538071745 0.0 0.0 0 0.5 0.0 0.0 0.0 C(Carbamidomethyl (C))AEEY 2.9395 - 153 1 1.875 39231.2 1.0 1970 3301 5265 DOHH2_400M_050219_2,5273 DOHH2_400M_050219_2,5273,AEMAEDPRVMY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5274 27.567 272.0 405260.0 25 0 46207.0 + 7171 EEPPSKPSF 9 128 509.2480907567701 1016.4816285803404 2 509.2485534548759 MULTI CID FTMS 0 0 0 5265 284540.71875 0.9148423177806272 -1 0.1048622131347656 9 Unmodified _EEPPSKPSF_ ENSG00000186185|ENST00000593135|KIF18B;nc|ENSG00000186185|Q86Y91-6|KIF18B 26.268140514670165 0.1969607489560049 2 EEPPSK{M(Oxidation (M))|F}SP 9 2 + 60.372 0.0 0.0 5.9393 5.9393 89.359 0.0 0.0 0.0 47.61152733471803 8.212112250009653 8.212112250009653 12.954168023219523 0 0.3807196863200844 2.0 0.2742275032520141 0.0 EEPPSK{M(Oxidation (M))|F}SP;EEPPSKYAP;EEPPSK[PS]{M(Oxidation (M))|F};EEPP{[HG]|PP}[PA]SP;EEP[YK][PA]SP;EEPP{[HG]|PP}[TP]GP;EEPP{[HG]|PP}[PS]AP;{[QN]|[E{I|L}]|[KN]}Q{[HG]|PP}PP[HC];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[HG]|PP}PP[HC];EEP[YK][TP]GP 5.9393;4.6649;4.6354;3.7811;3.1384;2.5275;2.5066;2.497;2.1515;1.8849 -;-;+;-;-;-;-;-;-;- + 429 + 1 1.875 92145.6 1.0 1971 3301 5265 DOHH2_400M_050219_2,5274 DOHH2_400M_050219_2,5274,EEPPSKPSF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5275 27.57 173.0 367610.0 25 0 38642.0 38078 TPINNLHATQ 10 99 554.7898041412506 1107.565055349301 2 554.7894164919853 MULTI CID FTMS 0 0 0 5265 236907.171875 1.0 0 0.0 10 Unmodified _TPINNLHATQ_ ENSG00000237515|ENST00000558583|SHISA9;nc|ENSG00000237515|B4DS77-2|SHISA9 11.494710602746466 0.654671931888957 2 TP{M(Oxidation (M))|F}K 4 8 37.467 0.0 0.0 3.3828 0.0 0.0 0.0 631.3152559869749 631.3152559869749 20.38872836444014 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 0.0 0.0 TP{M(Oxidation (M))|F}K 3.3828 - 170 + 1 1.875 54631.2 1.0 1972 3301 5265 DOHH2_400M_050219_2,5275 DOHH2_400M_050219_2,5275,TPINNLHATQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5276 27.579 463.0 284840.0 25 0 24448.0 + 7313 EEVQVDPRKY 10 121 421.55054975848 1261.62981987564 3 421.5504943728447 MULTI CID FTMS 0 0 0 5265 240552.46875 0.7588901956032812 1 -0.0687637329101562 11 Unmodified _EEVQVDPRKY_ ENSG00000069956|ENST00000261845|MAPK6 32.89776655970281 0.2325650513667944 2 EE{[QV]|[N{I|L}]|[RA]|[KV]}VDY[RK]P 10 2 + 33.475 0.0 0.0 2.6533 2.6533 64.698 0.0 0.0 0.0 14.74655951415837 0.163904161881689 0.163904161881689 0.163904161881689 0 0.2742275032520141 1.0969100130080565 0.0 0.4247425010840047 EE{[QV]|[N{I|L}]|[RA]|[KV]}VDY[RK]P;EE{[QV]|[N{I|L}]|[RA]|[KV]}VDP[RK]Y;EE{[QV]|[N{I|L}]|[RA]|[KV]}VD[R{I|L}]Q{M(Oxidation (M))|F};EE{[QV]|[N{I|L}]|[RA]|[KV]}VD[R{I|L}]GA{M(Oxidation (M))|F};EE{[QV]|[N{I|L}]|[RA]|[KV]}V[QP]{I|L}SAY;EE{[QV]|[N{I|L}]|[RA]|[KV]}VDP[KT]A{M(Oxidation (M))|F};EE{[QV]|[N{I|L}]|[RA]|[KV]}V[QP]{I|L}SS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[HK]PDV{[QV]|[N{I|L}]|[RA]|[KV]}[HC] 2.6533;2.6403;2.4522;1.9981;1.6415;1.6209;1.2587;0.98773 -;+;-;-;-;-;-;- + 263 + 1 1.875 107365.9 1.0 1973 3301 5265 DOHH2_400M_050219_2,5276 DOHH2_400M_050219_2,5276,EEVQVDPRKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5277 27.592 800.0 220520.0 25 0 15388.0 + 7139 EENFPENKEY 10 160 649.7804967672452 1297.5464406012902 2 649.7790405154228 MULTI CID FTMS 0 0 0 5265 192393.9375 0.486864878244359 -10 0.7794265747070312 12 Unmodified _EENFPENKEY_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 53.31671820480216 0.0606844387689228 2 EEN{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}PEN 9 5 64.993 0.0 0.0 5.0089 0.0 0.0 0.0 125.07248865299064 125.07248865299064 46.03560505489219 0.0 0.0 0.0 0 1.1549471895720984 1.3010299956639813 0.7887254899964358 1.110924374808178 EEN{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}PEN 5.0089 - 3857 + 1 1.875 133448.7 0.949999988079071 1974 3301 5265 DOHH2_400M_050219_2,5277 DOHH2_400M_050219_2,5277,EENFPENKEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5278 27.606 800.0 247950.0 25 0 30432.0 + 516 AEHFLEQQM 9 168 574.7556676784515 1147.4967824237028 2 574.7551147341728 MULTI CID FTMS 0 0 0 5265 201124.828125 1.0 0 0.0 13 Oxidation (M) _AEHFLEQQM(Oxidation (M))_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 56.17704186161178 0.0281986971544335 2 {[CP]|[EA]}H{M(Oxidation (M))|F}{I|L}EQQ{M(Oxidation (M))|F} 9 0 + 61.024 0.0 0.0 5.318 5.318 77.502 0.0 0.0 0.0 3.253893415234259 12.812991404218472 3.253893415234259 3.253893415234259 0 0.805462187404089 0.585026652029182 1.329689690656103 0.0 + + {[CP]|[EA]}H{M(Oxidation (M))|F}{I|L}EQQ{M(Oxidation (M))|F};{[YC]|[HE]}A{M(Oxidation (M))|F}{I|L}EQQ{M(Oxidation (M))|F};{[CP]|[EA]}H{M(Oxidation (M))|F}{I|L}GAEQ{M(Oxidation (M))|F};{[CP]|[EA]}H{M(Oxidation (M))|F}{I|L}QEQ{M(Oxidation (M))|F};{[YC]|[HE]}A{M(Oxidation (M))|F}{I|L}GAEQ{M(Oxidation (M))|F};{[CP]|[EA]}H{M(Oxidation (M))|F}{I|L}E[AG]Q{M(Oxidation (M))|F};{[CP]|[EA]}H{M(Oxidation (M))|F}{I|L}EQ[AG]{M(Oxidation (M))|F};{[YC]|[HE]}A{M(Oxidation (M))|F}{I|L}QEQ{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}EA{I|L}EQQ{M(Oxidation (M))|F};{[YC]|[HE]}A{M(Oxidation (M))|F}{I|L}E[AG]Q{M(Oxidation (M))|F} 5.318;5.0345;4.8462;4.5816;4.5627;4.5156;4.5156;4.298;4.2797;4.232 +;-;-;-;-;-;-;-;-;- + 2589 1 1.875 150952.2 0.9800000190734864 1975 3301 5265 DOHH2_400M_050219_2,5278 DOHH2_400M_050219_2,5278,AEHFLEQQM True False AEHFLEQQM 27.606296 574.755114734173 1043097.9375 5265.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 7.282437642415364 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5280 27.611 8.9 6888100.0 25 0 706690.0 + 41287 VPHTRPVSL 9 74 503.2957129512363 1004.5768729692726 2 503.2956420779228 MULTI CID FTMS 0 0 0 5279 6089223.5 0.8180919314026409 1 -0.0854148864746093 1 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 49.93300154707207 0.0405168250806675 2 VPHT 4 5 71.74 0.0 0.0 7.1413 0.0 0.0 0.0 567.3266085260374 567.3266085260374 59.5217596488785 0.0 0.0 0.0 0 0.7059771852360797 2.0 1.274227503252014 0.0 + VPHT 7.1413 + + 71 + 1 1.875 53630.7 1.0 1976 3302 5279 DOHH2_400M_050219_2,5280 DOHH2_400M_050219_2,5280,VPHTRPVSL True True VPHTRPVSL 27.610771 503.295642077923 178104420.0 5279.0 ENST00000412609.5_1_19:40170059-40174276:+|nuORF 7.917462348937988 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5281 27.612 13.0 2644100.0 25 0 195530.0 + 38457 TSDDVKEQIY 10 72 599.285144557565 1196.55573618193 2 599.2850219607353 MULTI CID FTMS 0 0 0 5279 3826288.75 0.6047454792127712 1 -0.0854148864746093 2 Unmodified _TSDDVKEQIY_ ENSG00000110700|ENST00000525634|RPS13;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000534329.1_1_11:17098694-17099257:-|nuORF 67.83816525789305 0.0190062514522628 2 {[MG]|[TS]}D[VS]PQST{I|L}Y 11 5 + 44.429 0.0 0.0 3.7131 3.7131 81.107 0.0 0.0 0.0 4.981979378655865 27.439423219792367 4.981979378655865 13.375923253651044 0 1.3935078169319297 0.0 0.3807196863200844 0.4247425010840047 {[MG]|[TS]}D[VS]PQST{I|L}Y;{[MG]|[TS]}D[VS]P[AG]ST{I|L}Y;{[MG]|[TS]}D[VS]P{[MG]|[TS]}Q{I|L}Y;{[MG]|[TS]}D[VS]P[C(Carbamidomethyl (C))R]{I|L}Y;{[MG]|[TS]}D[VS]{[RE]|[WV]}Q{I|L}Y;[SG][Q{I|L}]VDDST{I|L}Y;{[MG]|[TS]}D[VS]PQ[NG][RH] 3.7131;2.5952;2.42;2.0996;1.8705;1.3113;1.2959 -;-;-;-;-;-;- 160 1 1.875 33441.1 1.0 1977 3302 5279 DOHH2_400M_050219_2,5281 DOHH2_400M_050219_2,5281,TSDDVKEQIY True True TSDDVKEQIY 27.61195 599.285021960735 117317933.875 5279.0 ENST00000534329.1_1_11:17098694-17099257:-|nuORF;;ENSG00000110700|ENST00000525634|RPS13;;ENST00000526895.5_1_11:17095982-17099246:-|nuORF 7.981346766153972 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5282 27.613 28.0 1556300.0 25 0 205290.0 + 26444 NTEEEGLKY 9 80 541.7537106384104 1081.4928683436208 2 541.7536498904228 MULTI CID FTMS 0 0 0 5279 2014983.75 0.9412686815895938 1 -0.0854148864746093 3 Unmodified _NTEEEGLKY_ ENSG00000029363|ENST00000531224|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;nc|ENSG00000029363|Q9NYF8-3|BCLAF1 65.23502041540118 0.0231836506122253 2 {[QS]|[NT]}EEE{[VA]|[{I|L}G]}KY 9 0 + 78.35 0.0 0.0 7.2446 7.2446 95.822 0.0 0.0 0.0 62.15227486541373 14.09256854528806 14.09256854528806 31.49288766643714 0 0.4247425010840047 2.0 1.274227503252014 0.4247425010840047 + + {[QS]|[NT]}EEE{[VA]|[{I|L}G]}KY;{[QS]|[NT]}{M(Oxidation (M))|F}[HC]{[VA]|[{I|L}G]}KY;{[QS]|[NT]}[WQ][YR]{[QS]|[NT]};[K{I|L}][HT]E[HC]{[QS]|[NT]};[K{I|L}][WY]{M(Oxidation (M))|F}YY 7.2446;4.3326;2.1854;0.51967;0.39067 +;-;-;-;- + 194 + 1 1.875 38227.9 1.0 1978 3302 5279 DOHH2_400M_050219_2,5282 DOHH2_400M_050219_2,5282,NTEEEGLKY True True NTEEEGLKY 27.613129 541.753649890423 11719740.0 5279.0 nc|ENSG00000029363|Q9NYF8-2|BCLAF1;;ENSG00000029363|ENST00000531224|BCLAF1;;nc|ENSG00000029363|Q9NYF8-3|BCLAF1 7.627352237701416 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5283 27.614 37.0 1050600.0 25 0 59966.0 + -1 SRPDSILGMQF 11 72 633.8106420587354 1265.6067311842708 2 633.8108398318291 MULTI CID FTMS 0 0 0 5279 1464832.0 0.3364781376681894 -2 0.1736259460449218 4 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 20.41453444215458 0.6105011870913812 2 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 56.402 0.0 0.0 4.4565 4.4565 75.426 0.0 0.0 0.0 0.7918124604762511 43.30279842203627 0.7918124604762511 4.291294632377571 0 0.9876954943324544 0.0 0.0 2.036150500836482 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 4.4565;4.1174;3.7324;3.7324;3.3933;3.3933;3.0111;2.672 -;-;-;-;-;-;-;- 345 1 1.875 37048.0 1.0 1979 3302 5279 DOHH2_400M_050219_2,5283 DOHH2_400M_050219_2,5283,SRPDSILGMQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5284 27.616 47.0 1340700.0 25 0 246490.0 + 9408 FKDLGEEHFK 10 72 417.2119902442587 1248.614141332976 3 417.2117797732353 MULTI CID FTMS 0 0 0 5279 801069.625 0.658265979409611 -1 0.0687637329101562 5 Unmodified _FKDLGEEHFK_ CON__P02769 28.23362336080872 0.3343390635154222 2 {M(Oxidation (M))|F}HEEG{I|L}DQE 9 8 39.993 0.0 0.0 3.203 0.0 0.0 146.10614211250157 0.0 146.10614211250157 0.0 18.56619119593472 0.0 0.0 0 0.535666875892183 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}HEEG{I|L}DQE 3.203 - 122 1 1.875 58914.1 1.0 1980 3302 5279 DOHH2_400M_050219_2,5284 DOHH2_400M_050219_2,5284,FKDLGEEHFK False True FKDLGEEHFK 27.615569 417.211779773235 8278848.375 5279.0 P02769 11.21643034617106 3.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 5285 27.619 175.0 399080.0 25 0 42173.0 + 32714 SEALGDNVKQY 11 81 612.2985510717122 1222.5825492102242 2 612.2983276247978 MULTI CID FTMS 0 0 0 5279 489280.53125 1.0 0 0.0 6 Unmodified _SEALGDNVKQY_ ENSG00000152382|ENST00000367874|TADA1 68.75988807550267 0.0359983986270074 2 {[ES]|[DT]|[{I|L}C]}A{I|L}GDNVKQY 11 0 + 64.35 0.0 0.0 5.2635 5.2635 76.112 0.0 0.0 0.0 50.3710000371578 16.034638897453803 16.034638897453803 2.4190854354532405 0 1.9876954943324543 0.0 0.0 0.805462187404089 + + {[ES]|[DT]|[{I|L}C]}A{I|L}GDNVKQY;{[ES]|[DT]|[{I|L}C]}A{I|L}GDGGVKQY;{[ES]|[DT]|[{I|L}C]}A{I|L}GDNVK[AG]Y;{[ES]|[DT]|[{I|L}C]}A{I|L}[DN]GVKQY;{[ES]|[DT]|[{I|L}C]}A{I|L}GDGGVK[AG]Y;{[ES]|[DT]|[{I|L}C]}A{I|L}GAA{[DA]|[EG]}KQY;{[ES]|[DT]|[{I|L}C]}A{I|L}[QA]{[DA]|[EG]}KQY;{[ES]|[DT]|[{I|L}C]}A{I|L}[DN]GVK[AG]Y;{[ES]|[DT]|[{I|L}C]}AQA{I|L}{[DA]|[EG]}KQY;{[ES]|[DT]|[{I|L}C]}AQ[DV]GVKQY 5.2635;5.0656;4.2054;4.1993;4.01;3.5152;3.3647;3.1413;3.0418;2.9793 +;-;-;-;-;-;-;-;-;- + 623 + 1 1.875 58367.4 1.0 1981 3302 5279 DOHH2_400M_050219_2,5285 DOHH2_400M_050219_2,5285,SEALGDNVKQY True True SEALGDNVKQY 27.618994 612.298327624798 4195241.5 5279.0 ENSG00000152382|ENST00000367874|TADA1 7.618555545806885 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5286 27.622 138.0 425590.0 25 0 49667.0 + 36900 TEQPPPRSW 9 81 549.2724238958491 1096.530294858498 2 549.2724487185478 MULTI CID FTMS 0 0 0 5279 274649.3125 0.6008380634545869 6 -0.359201431274414 7 Unmodified _TEQPPPRSW_ ENSG00000113300|ENST00000261951|CNOT6 43.77239144664712 0.0547478964384323 2 {[ET]|[MV]}QPP[RP]SW 9 0 + 40.313 0.0 0.0 3.6764 3.6764 69.05 0.0 0.0 0.0 1.4794000867203678 1.4794000867203678 1.4794000867203678 1.4794000867203678 0 0.9247425010840048 0.0 0.5 0.8494850021680094 + + {[ET]|[MV]}QPP[RP]SW;{[ET]|[MV]}QPP[WR][PS];[AG]Y[RP]PPQ[DP];{[ET]|[MV]}[AG]PP[RP]SW;{[DS]|[MA]|[CV]|TT}[WR]PP[AG][DP];[AG]Y[RP]PP[AG][DP];[YQ][RP]PPQ[DP];{[ET]|[MV]}[WK]PAH[QT];{[ET]|[MV]}[PG]AP[RP]SW;[YQ][RP]PP[AG][DP] 3.6764;3.5415;3.4572;2.8366;2.7017;2.6214;2.4224;2.0388;1.6268;1.5826 +;-;-;-;-;-;-;-;-;- + 200 + 1 1.875 50082.0 1.0 1982 3302 5279 DOHH2_400M_050219_2,5286 DOHH2_400M_050219_2,5286,TEQPPPRSW True True TEQPPPRSW 27.62179 549.272448718548 25854022.5 5279.0 ENSG00000113300|ENST00000261951|CNOT6 7.784760316212972 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5287 27.636 800.0 301080.0 25 0 50933.0 + 17558 KPPSPIIV 8 154 425.7747044660149 849.5348559988298 2 425.7744018435478 MULTI CID FTMS 0 0 0 5279 245931.953125 0.8903194972828239 -1 0.0687637329101562 8 Unmodified _KPPSPIIV_ REV__ENSG00000148143|ENST00000277225|ZNF462;REV__nc|ENSG00000148143|Q96JM2-2|ZNF462;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462 2.577480529830294 0.808687252328423 2 Y 1 -1 12.474 0.0 0.0 1.4684 0.0 0.0 668.4604063912111 0.0 668.4604063912111 0.0 3.26606256887672 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4684 - 50 + 1 1.875 188978.6 0.9100000262260436 1983 3302 5279 DOHH2_400M_050219_2,5287 DOHH2_400M_050219_2,5287,KPPSPIIV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5288 27.648 735.0 162440.0 25 0 14888.0 + -1 FDQGCEECTY 10 149 626.2178736695523 1250.4211944059043 2 626.2181884646416 MULTI CID FTMS 0 0 0 5279 245026.984375 0.3742352647728375 -2 0.1736259460449218 9 Carbamidomethyl (C) _FDQGC(Carbamidomethyl (C))EECTY_ REV__ENSG00000185177|ENST00000319636|ZNF479 10.073929032068715 0.6785112666868882 2 QTYETY 6 -1 43.026 0.0 0.0 3.4409 0.0 0.0 447.0883351056656 0.0 447.0883351056656 0.0 -0.6761934662405622 -0.6761934662405622 0.0 0 0.8935078169319297 0.0 0.5796896906561032 0.9163865622122672 QTYETY 3.4409 - 785 1 1.875 92822.3 1.0 1984 3302 5279 DOHH2_400M_050219_2,5288 DOHH2_400M_050219_2,5288,FDQGCEECTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5289 27.65 99.0 502010.0 25 0 59872.0 + 23244 LSTPLLKSRD 10 72 377.2238413673133 1128.64969470214 3 377.2238647341728 MULTI CID FTMS 0 0 0 5279 225071.125 1.0 0 0.0 10 Unmodified _LSTPLLKSRD_ REV__ENSG00000162779|ENST00000367618|AXDND1 8.97624648632007 0.6851160995914376 2 Y 1 -1 13.979 0.0 0.0 1.2386 0.0 0.0 947.575657081826 0.0 947.575657081826 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2386 - 17 + 1 1.875 45431.8 1.0 1985 3302 5279 DOHH2_400M_050219_2,5289 DOHH2_400M_050219_2,5289,LSTPLLKSRD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5290 27.664 800.0 162210.0 25 0 11260.0 + 7196 EEQLQQIRAE 10 139 622.3171617688488 1242.6197706044975 2 622.3160278201103 MULTI CID FTMS 0 0 0 5279 159305.78125 0.9864794560085238 -1 0.0687637329101562 11 Unmodified _EEQLQQIRAE_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 47.7319792270244 0.0934623409360514 2 EEQ{I|L}QQ{I|L}R{[CP]|[EA]} 10 0 + 56.192 0.0 0.0 4.522 4.522 80.377 0.0 0.0 0.0 33.79576586749466 1.3558302547162526 1.3558302547162526 9.16453948549924 0 0.6421590589602533 1.154901959985743 0.3494850021680094 0.6643943297944485 + + EEQ{I|L}QQ{I|L}R{[CP]|[EA]};EEQ{I|L}Q[AG]{I|L}R{[CP]|[EA]};EE[AG]{I|L}QQ{I|L}R{[CP]|[EA]};EEQ{I|L}[AG]Q{I|L}R{[CP]|[EA]};[AG]{I|L}[{M(Oxidation (M))|F}V]QQ{I|L}Q[HC];EEQ{I|L}[AG][AG]{I|L}R{[CP]|[EA]};EE[AG]{I|L}[AG]Q{I|L}R{[CP]|[EA]};EE[AG]{I|L}Q[AG]{I|L}R{[CP]|[EA]};[Q{I|L}][{M(Oxidation (M))|F}V]QQ{I|L}Q[HC];[AG]{I|L}Q{M(Oxidation (M))|F}VQ{I|L}Q[HC] 4.522;3.7845;3.7845;3.7845;3.103;3.0499;3.0499;3.0499;2.9741;2.7867 +;-;-;-;-;-;-;-;-;- + 1021 + 1 1.875 99343.7 0.8899999856948853 1986 3302 5279 DOHH2_400M_050219_2,5290 DOHH2_400M_050219_2,5290,EEQLQQIRAE True True EEQLQQIRAE 27.664325 622.31602782011 1086878.5 5279.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 2.653048356374105 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 5291 27.67 329.0 402450.0 25 0 55325.0 + 43354 WPGPSPAP 8 138 404.7027871779939 807.3910214227878 2 404.7026855349541 MULTI CID FTMS 0 0 0 5279 131200.1875 0.1674404688645483 -2 0.1736259460449218 12 Unmodified _WPGPSPAP_ REV__ENST00000490199.2_1_9:35829937-35842629:+|nuORF 5.760428011301431 0.7893668129297577 2 [WP]C 3 -1 19.459 0.0 0.0 2.4101 0.0 0.0 0.0 418.2190603234316 418.2190603234316 3.974248954299096 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.0 [WP]C 2.4101 - 57 1 1.875 106514.8 1.0 1987 3302 5279 DOHH2_400M_050219_2,5291 DOHH2_400M_050219_2,5291,WPGPSPAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5292 27.685 800.0 217860.0 25 0 43146.0 + 5165 DIKVKEQSL 9 162 530.306429426902 1058.598305920604 2 530.3065673708916 MULTI CID FTMS 0 0 0 5279 137436.078125 1.0 0 0.0 13 Unmodified _DIKVKEQSL_ ENSG00000117543|ENST00000370109|DPH5;ENST00000481871.5_1_1:101455997-101490867:-|nuORF;ENST00000492067.5_1_1:101455997-101487245:-|nuORF;nc|ENSG00000117543|Q9H2P9-2|DPH5;nc|ENSG00000117543|Q9H2P9-3|DPH5;nc|ENSG00000117543|Q9H2P9-4|DPH5;nc|ENSG00000117543|Q9H2P9-5|DPH5;nc|ENSG00000117543|Q9H2P9-6|DPH5 59.36838082759317 0.0264317782606298 2 D{I|L}KV{M(Oxidation (M))|F}KNE 8 5 76.034 0.0 0.0 7.1825 0.0 0.0 0.0 82.06694971256093 82.06694971256093 60.66873423581165 0.0 0.0 0.0 0 0.9876954943324544 2.0 0.3494850021680094 0.7614393726401688 D{I|L}KV{M(Oxidation (M))|F}KNE 7.1825 - 1148 + 1 1.875 137492.4 0.7900000214576721 1988 3302 5279 DOHH2_400M_050219_2,5292 DOHH2_400M_050219_2,5292,DIKVKEQSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5293 27.688 115.0 546420.0 25 0 192670.0 26901 PDLKVRCI 8 80 472.2732033868052 0 472.2721740603447 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _PDLKVRCI_ ENSG00000127249|ENST00000342695|ATP13A4;nc|ENSG00000127249|Q4VNC1-2|ATP13A4;nc|ENSG00000127249|Q4VNC1-3|ATP13A4 8.593279151180031 0.5573742999696857 2 E 1 8 5.3141 0.0 0.0 0.56381 0.0 0.0 728.3994971282996 82.0669420831664 810.466439211466 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2215141619232908 0.0 E 0.56381 - 5 + 1 1.875 51534.7 1.0 1989 3302 5279 DOHH2_400M_050219_2,5293 DOHH2_400M_050219_2,5293,PDLKVRCI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5294 27.692 207.0 345840.0 25 0 35901.0 + 19048 LDNATDRKP 9 100 515.2690152832262 0 515.2699462771416 PEAK CID FTMS 0 0 0 5279 90520.875 0.833866578290284 -1 0.0687637329101562 15 Unmodified _LDNATDRKP_ REV__ENSG00000183775|ENST00000512467|KCTD16 24.020572477871973 0.1646235280836931 2 K 1 -1 10.485 0.0 0.0 1.0194 0.0 0.0 202.1276159652876 695.2832655873693 897.410881552657 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 K 1.0194 + + 46 + 1 1.875 59287.7 1.0 1990 3302 5279 DOHH2_400M_050219_2,5294 DOHH2_400M_050219_2,5294,LDNATDRKP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5296 27.696 11.0 2661600.0 25 0 200980.0 + 23428 LTEQYNEQY 9 62 594.2646302950085 1186.5147076568169 2 594.2648193240166 MULTI CID FTMS 0 0 0 5295 3737062.25 0.2452775022253131 2 -0.1324310302734375 1 Unmodified _LTEQYNEQY_ ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 36.12702656103203 0.0967173616627612 2 QY 2 7 24.949 0.0 0.0 2.1027 0.0 0.0 877.38212206287 0.0 877.38212206287 0.0 6.581443306399276 0.0 0.0 0 0.5 0.0 0.0 0.5 + QY 2.1027 + + 160 + 1 1.873 27851.2 1.0 1991 3303 5295 DOHH2_400M_050219_2,5296 DOHH2_400M_050219_2,5296,LTEQYNEQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5297 27.699 163.0 331200.0 25 0 34757.0 + 32440 SADPGNLKY 9 85 482.74008655054735 963.4656201678948 2 482.7401916384697 MULTI CID FTMS 0 0 0 5295 273882.90625 0.1822512419302502 2 -0.1324310302734375 2 Unmodified _SADPGNLKY_ ENST00000522841.6_1_16:21481075-21531198:-|nuORF 24.020572477871973 0.2255576514309169 2 {[SA]|[TG]}DP[RK]QY 8 4 + 48.365 0.0 0.0 5.0199 5.0199 84.399 0.0 0.0 0.0 32.791681396006 7.166987712964499 7.166987712964499 9.262137858390808 0 0.5 2.0 0.0 0.0 {[SA]|[TG]}DP[RK]QY;{[SA]|[TG]}DP[RK][AG]Y;{[SA]|[TG]}D{[QV]|[N{I|L}]|[RA]|[KV]}[PG]KY;{[SA]|[TG]}D{[QV]|[N{I|L}]|[RA]|[KV]}[YK][PG] 5.0199;4.0586;3.2901;1.2909 -;-;-;- 122 + 1 1.873 48213.5 1.0 1992 3303 5295 DOHH2_400M_050219_2,5297 DOHH2_400M_050219_2,5297,SADPGNLKY False True SADPGNLKY 27.699379 482.74019163847 8517268.0 5295.0 ENST00000522841.6_1_16:21481075-21531198:-|nuORF 6.261216799418132 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5298 27.701 77.0 742700.0 25 0 104970.0 + 32437 SADPDNLKY 9 76 511.7447989500272 1021.4750449668544 2 511.7430297732353 MULTI CID FTMS 0 0 0 5295 643393.375 0.6287320508966474 -1 0.0854148864746093 3 Unmodified _SADPDNLKY_ ENSG00000157106|ENST00000446231|SMG1 26.268140514670165 0.1969607489560049 2 {[SA]|[TG]}DPD{[QV]|[N{I|L}]|[RA]|[KV]}KY 9 0 + 56.36 0.0 0.0 5.5176 5.5176 87.404 0.0 0.0 0.0 26.19666231504993 8.389399919613965 8.389399919613965 12.21848749616356 0 0.9247425010840048 2.0 0.0 0.0 + + {[SA]|[TG]}DPD{[QV]|[N{I|L}]|[RA]|[KV]}KY;{[SA]|[TG]}DP[KT][PS]GY;{[SA]|[TG]}D[RV]A[PS]GY;{[SA]|[TG]}DPR[YG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[DP]N{I|L}S[YG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}[PS]PS[YG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}[HQ][WH]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[DP]NP[WH]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DA]|[EG]}SPR[YG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[DP]GG{I|L}S[YG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.5176;4.3214;3.732;2.8671;2.2403;2.1648;1.6529;1.5823;1.4936;1.0204 +;-;-;-;-;-;-;-;-;- + 302 + 1 1.873 50992.5 1.0 1993 3303 5295 DOHH2_400M_050219_2,5298 DOHH2_400M_050219_2,5298,SADPDNLKY False True SADPDNLKY 27.701162 511.743029773235 11487052.0 5295.0 ENSG00000157106|ENST00000446231|SMG1 8.27127488454183 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5299 27.703 106.0 604320.0 25 0 43372.0 + 33070 SEQSLGQKL 9 95 495.2668136382204 988.5190743432408 2 495.2666808962822 MULTI CID FTMS 0 0 0 5295 491323.03125 0.2443997408628602 -2 0.1541786193847656 4 Unmodified _SEQSLGQKL_ ENSG00000104738|ENST00000649973|MCM4 69.10491478415734 0.0214449631113747 2 {[ES]|[DT]|[{I|L}C]}QS{I|L}{[QG]|[NA]}K{I|L} 9 0 + 47.584 0.0 0.0 4.8137 4.8137 82.731 0.0 0.0 0.0 33.894863626810775 2.4785615825148 2.4785615825148 9.208187539523747 0 1.274227503252014 0.0 0.5 0.75 + + {[ES]|[DT]|[{I|L}C]}QS{I|L}{[QG]|[NA]}K{I|L};{[ES]|[DT]|[{I|L}C]}[AG]S{I|L}{[QG]|[NA]}K{I|L};{[MG]|[TS]}KK{I|L}SYY;[AG]G{I|L}S[Q{I|L}]K{[ES]|[DT]|[{I|L}C]};[AG]G{I|L}S[KQ]{I|L}{[ES]|[DT]|[{I|L}C]};[AG]S[{I|L}V][QA]K{[ES]|[DT]|[{I|L}C]};{[QG]|[NA]}{I|L}S[Q{I|L}]K{[ES]|[DT]|[{I|L}C]};[AG]S{[VA]|[{I|L}G]}[Q{I|L}]K{[ES]|[DT]|[{I|L}C]};{[QG]|[NA]}{I|L}S[KQ]{I|L}{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}[KG][KP]K{[ES]|[DT]|[{I|L}C]} 4.8137;3.8822;3.6232;0.84791;0.66978;0.48269;0.28312;0.11051;0.10498;0.081396 +;-;-;-;-;-;-;-;-;- + 179 + 1 1.873 55011.0 1.0 1994 3303 5295 DOHH2_400M_050219_2,5299 DOHH2_400M_050219_2,5299,SEQSLGQKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5300 27.706 150.0 437410.0 25 0 38805.0 815 AESWHTDSYFT 11 97 448.5247830030268 1342.5525196092804 3 448.5246765017509 MULTI CID FTMS 0 0 0 5295 340404.0 0.7214874463136404 2 -0.1324310302734375 5 Unmodified _AESWHTDSYFT_ ENSG00000188394|ENST00000616002|GPR21 5.296884461304476 0.8501568894076437 2 {I|L}K[Y{I|L}]TY 6 9 26.515 0.0 0.0 1.975 0.0 0.0 543.1069152165054 0.0 543.1069152165054 0.0 15.095335588663463 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}K[Y{I|L}]TY 1.975 - 122 + 1 1.873 60117.6 1.0 1995 3303 5295 DOHH2_400M_050219_2,5300 DOHH2_400M_050219_2,5300,AESWHTDSYFT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5301 27.708 83.0 423440.0 25 0 23052.0 + 33145 SEVILHHEY 9 78 563.781075695229 1125.547598457258 2 563.7812377810478 MULTI CID FTMS 0 0 0 5295 284121.875 0.1168285425394209 3 -0.1790046691894531 6 Unmodified _SEVILHHEY_ ENSG00000144028|ENST00000323853|SNRNP200 27.22323531849824 0.1848086127304535 2 [DV]T{I|L} 4 7 30.177 0.0 0.0 2.6811 0.0 0.0 0.0 694.2977870161047 694.2977870161047 16.682437647924218 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 [DV]T{I|L} 2.6811 - 71 1 1.873 33788.1 1.0 1996 3303 5295 DOHH2_400M_050219_2,5301 DOHH2_400M_050219_2,5301,SEVILHHEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5302 27.712 168.0 540300.0 25 0 115850.0 + -1 EPLMKKRLL 9 94 381.901693775833 1142.683251927699 3 381.9005615115166 MULTI CID FTMS 0 0 0 5295 196927.171875 0.6357091257290182 -1 0.0854148864746093 7 Oxidation (M) _EPLM(Oxidation (M))KKRLL_ REV__ENSG00000160505|ENST00000301295|NLRP4;REV__nc|ENSG00000160505|Q96MN2-2|NLRP4;REV__nc|ENSG00000160505|Q96MN2-3|NLRP4 7.608950283845883 0.6490595679007971 2 {M(Oxidation (M))|F}[EP]K{I|L}KR{I|L}{I|L} 9 -1 + 34.28 0.0 0.0 3.0 3.0 81.697 0.0 0.0 0.0 22.68623129393988 8.205386680075229 8.205386680075229 34.28002510706194 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[EP]K{I|L}KR{I|L}{I|L} 3 - 45 + 1 1.873 75542.5 1.0 1997 3303 5295 DOHH2_400M_050219_2,5302 DOHH2_400M_050219_2,5302,EPLMKKRLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5303 27.719 410.0 205590.0 25 0 14034.0 + -1 LAMMTLPEQ 9 124 525.2533203833414 1048.4920878334826 2 525.2529174685478 MULTI CID FTMS 0 0 0 5295 175919.125 1.0 0 0.0 8 Oxidation (M) _LAM(Oxidation (M))MTLPEQ_ REV__ENSG00000196218|ENST00000359596|RYR1;REV__nc|ENSG00000196218|P21817-2|RYR1;REV__nc|ENSG00000196218|P21817-3|RYR1 25.399314129420983 0.2080152500878129 2 A{I|L}[YN]{M(Oxidation (M))|F}{I|L}Q 7 -1 44.257 0.0 0.0 4.221 0.0 0.0 181.07144681961387 0.0 181.07144681961387 0.0 25.673647750663804 0.0 0.0 0 1.805462187404089 0.0 0.0 0.7742275032520141 A{I|L}[YN]{M(Oxidation (M))|F}{I|L}Q 4.221 - 1375 + 1 1.873 67456.9 1.0 1998 3303 5295 DOHH2_400M_050219_2,5303 DOHH2_400M_050219_2,5303,LAMMTLPEQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5304 27.733 800.0 79271.0 25 0 6238.4 -1 YWVTWCWPHSQ 11 85 775.3371312937586 1548.659709654317 2 775.3375732302666 MULTI CID FTMS 0 0 0 5295 111347.3125 0.0189630822368768 9 -0.6103916168212891 9 Carbamidomethyl (C) _YWVTWC(Carbamidomethyl (C))WPHSQ_ ENST00000596765.5_1_19:50165795-50166512:-|nuORF;nc|ENSG00000126456|Q14653-5|IRF3 2.9952420565917617 0.861016188266951 2 [YE][C(Carbamidomethyl (C))K]AQQNA{M(Oxidation (M))|F}YQ 12 -1 + 78.326 0.0 0.0 5.0576 5.0576 81.124 0.0 0.0 0.0 1.706962271689747 65.85138771613167 1.706962271689747 7.403626894942434 0 1.5 0.0 0.0 0.7742275032520141 [YE][C(Carbamidomethyl (C))K]AQQNA{M(Oxidation (M))|F}YQ;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WH]AQQNA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]A[AG]QNA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]AQ[AG]NA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]AQQGGA{M(Oxidation (M))|F}YQ;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WH]A[AG]QNA{M(Oxidation (M))|F}YQ;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WH]AQQGGA{M(Oxidation (M))|F}YK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WH]AQ[AG]NA{M(Oxidation (M))|F}YK;[YE][C(Carbamidomethyl (C))K]AQD[TP]{M(Oxidation (M))|F}YK;[QP]G[WE][Y{M(Oxidation (M))|F}]NA{M(Oxidation (M))|F}YQ 5.0576;4.5796;4.4701;4.4701;4.4701;3.9921;3.9921;3.9921;3.7332;3.6673 -;-;-;-;-;-;-;-;-;- 573 1 1.873 50483.4 0.6299999952316284 1999 3303 5295 DOHH2_400M_050219_2,5304 DOHH2_400M_050219_2,5304,YWVTWCWPHSQ False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_2 5305 27.738 261.0 283630.0 25 0 22417.0 + 32856 EESEAYKSL 9 112 527.7412886371401 1053.46802434108 2 528.2452880740166 MULTI CID FTMS 0 0 0 5295 98109.6875 0.7094721403979766 -1 0.0854148864746093 10 Unmodified _SEHCRLYF_ ENSG00000022277|ENST00000357348|RTF2 14.581692164780916 0.6954967302934248 2 {M(Oxidation (M))|F} 1 7 13.979 0.0 0.0 1.327 0.0 0.0 888.3890123555317 0.0 888.3890123555317 0.0 -2.526042185661325 -2.526042185661325 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.327 + + 256 + 1 1.873 62175.3 1.0 2000 3303 5295 DOHH2_400M_050219_2,5305 DOHH2_400M_050219_2,5305,SEHCRLYF False False EESEAYKSL 27.737579 528.245288074017 996918.3125 5295.0 ENSG00000022277|ENST00000357348|RTF2 5.1962653795878095 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5306 27.751 800.0 127110.0 25 0 20843.0 -1 0 60 1197.160072000944 3588.458386603032 3 1197.495043933392 MULTI CID FTMS 0 0 0 5295 219305.328125 1.0 0 0.0 11 2 Y{I|L}GAEKVY 8 -1 34.238 0.0 0.0 0.95412 0.0 0.0 2409.912196272757 252.0520418756469 2661.964238148404 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 Y{I|L}GAEKVY 0.95412 - 117 + 1 1.873 82326.9 0.6299999952316284 2001 3303 5295 DOHH2_400M_050219_2,5306 DOHH2_400M_050219_2,5306, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5307 27.765 800.0 233600.0 25 0 11648.0 -1 0 178 578.3382341231647 577.3309576565647 1 578.3389770388603 MULTI CID FTMS 0 0 0 5295 127238.1171875 0.3057472828790687 9 -0.6103916168212891 12 2 Y 1 -1 11.783 0.0 0.0 2.0409 0.0 0.0 396.2567216719928 0.0 396.2567216719928 0.0 2.0288267309199703 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.0409 - 53 + 1 1.873 141020.2 0.6899999976158142 2002 3303 5295 DOHH2_400M_050219_2,5307 DOHH2_400M_050219_2,5307, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5309 27.77 45.0 1002200.0 25 0 72176.0 + 42380 VTDPEKLNNY 10 79 596.7959558709654 1191.5773588087309 2 596.7958251833916 MULTI CID FTMS 0 0 0 5308 1458487.625 0.8064922625023259 1 -0.0587062835693359 1 Unmodified _VTDPEKLNNY_ ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L 76.82478488871298 0.0187167883027705 2 {[TV]|[{I|L}S]}[PG]{I|L}NDDY[KA] 11 7 + 65.054 0.0 0.0 5.4595 5.4595 78.831 0.0 0.0 0.0 11.20947603139011 22.084847880583737 11.20947603139011 3.807196863200837 0 0.5 1.6989700043360187 1.079689690656103 0.3807196863200844 {[TV]|[{I|L}S]}[PG]{I|L}NDDY[KA];{[TV]|[{I|L}S]}[PG]{I|L}NDYD[KA];{[TV]|[{I|L}S]}[PG]{I|L}DNDY[KA];{[TV]|[{I|L}S]}[PG]{I|L}DNYD[KA];{[TV]|[{I|L}S]}DPG{I|L}NDY[KA];{[TV]|[{I|L}S]}[PG]{I|L}GGDDY[KA];{[TV]|[{I|L}S]}DPG{I|L}NYD[KA];{[TV]|[{I|L}S]}[PG]{I|L}DGGDY[KA];{[TV]|[{I|L}S]}[PG]D{I|L}NDY[KA];{[TV]|[{I|L}S]}[PG]{I|L}GGDYD[KA] 5.4595;5.14;5.0591;4.7396;4.6506;4.3739;4.3311;4.293;4.2605;4.0544 -;-;-;-;-;-;-;-;-;- 976 1 1.873 40337.2 1.0 2003 3304 5308 DOHH2_400M_050219_2,5309 DOHH2_400M_050219_2,5309,VTDPEKLNNY True True VTDPEKLNNY 27.769912 596.795825183392 25683286.0 5308.0 ENSG00000104885|ENST00000398665|DOT1L;;nc|ENSG00000104885|Q8TEK3-1|DOT1L 9.069217046101889 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5310 27.772 108.0 284300.0 25 0 15537.0 + 25420 NEDEDSPNKLY 11 67 662.2892705492113 1322.5639881652226 2 662.2887451052666 MULTI CID FTMS 0 0 0 5308 409519.75 0.3119361129283761 2 -0.1052799224853515 2 Unmodified _NEDEDSPNKLY_ ENSG00000071082|ENST00000264258|RPL31;ENST00000480540.1_1_14:59261390-59261744:+|nuORF;nc|ENSG00000071082|P62899-2|RPL31;nc|ENSG00000071082|P62899-3|RPL31 30.7034409873982 0.3712764582118616 2 {[QD]|[EN]|[WG]|[KD]|[RS]}DEDS[NP]K{I|L}Y 11 0 {[QD]|[EN]|[WG]|[KD]|[RS]}DE + + 19.174 13.729 2.8181 1.4497 1.4497 47.055 0.0 0.0 0.0 0.0 5.30471667985921 0.0 0.0 0 0.0 0.0 0.0 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}DEDS[NP]K{I|L}Y 1.4497 + + 71 + 1 1.873 30869.9 1.0 2004 3304 5308 DOHH2_400M_050219_2,5310 DOHH2_400M_050219_2,5310,NEDEDSPNKLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5311 27.774 74.0 742570.0 25 0 84931.0 + -1 REAEFTKSI 9 94 540.7879386271128 1079.5613243210255 2 540.7879516482353 MULTI CID FTMS 0 0 0 5308 406925.25 0.4367717177539262 -2 0.1591396331787109 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LQYWTKSI_ ENSG00000118363|ENST00000263672|SPCS2 29.081581746732265 0.4323690340403521 2 {M(Oxidation (M))|F}TKS{I|L} 5 -1 52.251 0.0 0.0 4.84 0.0 0.0 485.2234059064469 0.0 485.2234059064469 0.0 38.2711470149615 0.0 0.0 0 1.0 0.0 0.8807196863200843 0.0 {M(Oxidation (M))|F}TKS{I|L} 4.84 - 249 1 1.873 47477.2 1.0 2005 3304 5308 DOHH2_400M_050219_2,5311 DOHH2_400M_050219_2,5311,LQYWTKSI False False REAEFTKSI 27.773943 540.787951648235 4031771.75 5308.0 ENSG00000118363|ENST00000263672|SPCS2 4.7591423988342285 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5312 27.777 161.0 522340.0 25 0 57700.0 307 ADVDECSLAEK 11 88 590.26578682883 1178.5170207244598 2 590.2664062380791 MULTI CID FTMS 0 0 0 5308 327614.15625 0.1454155065221096 -3 0.2279033660888672 4 Unmodified _ADVDECSLAEK_ ENSG00000184164|ENST00000328268|CRELD2;ENST00000483652.5_1_22:50312390-50319315:+|nuORF;nc|ENSG00000184164|Q6UXH1-4|CRELD2;nc|ENSG00000184164|Q6UXH1-5|CRELD2;nc|ENSG00000184164|Q6UXH1-6|CRELD2 18.373094154950223 0.6529654022026722 2 QHVDAAEK 8 6 78.204 0.0 0.0 6.6358 0.0 0.0 282.0878958238723 0.0 282.0878958238723 0.0 66.78408295050646 0.0 0.0 0 3.5356668758921828 0.0 0.3807196863200844 0.6747425010840047 QHVDAAEK 6.6358 - 172 + 1 1.873 68539.9 1.0 2006 3304 5308 DOHH2_400M_050219_2,5312 DOHH2_400M_050219_2,5312,ADVDECSLAEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5313 27.781 222.0 511190.0 25 0 86026.0 34141 SLLVSNDDWY 10 86 606.2815258011535 1210.548498669107 2 606.2819702029228 MULTI CID FTMS 0 0 0 5308 303156.8125 0.5431263709002601 -1 0.0737247467041015 5 Unmodified _SLLVSNDDWY_ ENST00000229379.2_1_12:120878347-120878512:+|nuORF 9.38312468134398 0.6832340498775793 2 {[QN]|[E{I|L}]|[KN]}E 3 9 21.254 0.0 0.0 1.7558 0.0 0.0 0.0 836.3812983119382 836.3812983119382 -8.064790766210454 0.0 -8.064790766210454 0.0 0 0.0 1.3979400086720375 0.0 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}E 1.7558 - 69 1 1.873 85743.2 1.0 2007 3304 5308 DOHH2_400M_050219_2,5313 DOHH2_400M_050219_2,5313,SLLVSNDDWY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5314 27.785 218.0 582600.0 25 0 136200.0 + 19450 LFDIILKAT 9 105 517.3162436459013 1032.6179343586025 2 517.3174926638603 MULTI CID FTMS 0 0 0 5308 262457.21875 0.6143795865151253 -2 0.1591396331787109 6 Unmodified _LFDIILKAT_ REV__ENSG00000163686|ENST00000478253|ABHD6 11.640296217721598 0.521594087909532 2 W 1 -1 13.099 0.0 0.0 1.2685 0.0 0.0 828.527188364265 0.0 828.527188364265 0.0 1.6789605096159654 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.2685 - 97 + 1 1.873 103069.4 1.0 2008 3304 5308 DOHH2_400M_050219_2,5314 DOHH2_400M_050219_2,5314,LFDIILKAT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5315 27.79 233.0 204950.0 25 0 12778.0 8087 EPEKWPLPP 9 85 364.8634471938584 1091.568512181775 3 364.8630859255791 MULTI CID FTMS 0 0 0 5308 160075.875 0.0899096330982468 3 -0.1574821472167968 7 Unmodified _EPEKWPLPP_ ENSG00000155506|ENST00000518297|LARP1;nc|ENSG00000155506|Q6PKG0-3|LARP1 4.75600775471527 0.7486543447549536 2 MQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L} 6 6 13.945 0.0 0.0 1.2775 0.0 0.0 329.1958542430446 0.0 329.1958542430446 0.0 2.1620581480562446 0.0 0.0 0 0.0 0.0 0.0 0.0 MQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L} 1.2775 - 77 + 1 1.873 44994.7 1.0 2009 3304 5308 DOHH2_400M_050219_2,5315 DOHH2_400M_050219_2,5315,EPEKWPLPP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5316 27.804 800.0 142010.0 25 0 20701.0 + 6141 DSYSSSRSDLY 11 112 640.2752580983663 1278.5359632635325 2 640.2747070193291 MULTI CID FTMS 0 0 0 5308 138765.875 1.0 0 0.0 8 Unmodified _DSYSSSRSDLY_ ENSG00000147274|ENST00000320676|RBMX;ENSG00000213516|ENST00000652648|RBMXL1;ENST00000568578.5_1_X:135956303-135956645:-|nuORF;nc|ENSG00000147274|P38159-2|RBMX 59.012897905743536 0.0731512788572055 2 SSYSD{I|L}Y 7 5 44.997 0.0 0.0 3.5195 0.0 0.0 445.1919422834 0.0 445.1919422834 0.0 -0.4831032296932491 -0.4831032296932491 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.0 SSYSD{I|L}Y 3.5195 - 825 1 1.873 88762.9 0.7099999785423279 2010 3304 5308 DOHH2_400M_050219_2,5316 DOHH2_400M_050219_2,5316,DSYSSSRSDLY True True DSYSSSRSDLY 27.803635 640.274707019329 775729.75 5308.0 ENSG00000147274|ENST00000320676|RBMX;;ENST00000568578.5_1_X:135956303-135956645:-|nuORF;;nc|ENSG00000147274|P38159-2|RBMX;;ENSG00000213516|ENST00000652648|RBMXL1 8.759686152140299 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5317 27.811 420.0 322590.0 25 0 52609.0 5470 DLRPRASAL 9 124 499.790326786278 997.566100639356 2 499.7909728884697 MULTI CID FTMS 0 0 0 5308 125692.9609375 0.7075517933292657 -2 0.1591396331787109 9 Unmodified _DLRPRASAL_ ENSG00000180425|ENST00000623205|C11orf71;nc|nan|Q6IPW1-2|C11orf71 24.020572477871973 0.2255576514309169 2 D{I|L}R 3 6 52.435 0.0 0.0 5.2563 0.0 0.0 0.0 610.3316046769847 610.3316046769847 38.94016261540408 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.3494850021680094 + D{I|L}R 5.2563 + + 140 + 1 1.873 106327.6 1.0 2011 3304 5308 DOHH2_400M_050219_2,5317 DOHH2_400M_050219_2,5317,DLRPRASAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5318 27.821 571.0 208700.0 25 0 12171.0 + 23799 LVDQRVAEY 9 152 546.7878432719856 1091.561133610771 2 546.7902099490166 MULTI CID FTMS 0 0 0 -1 0 10 Unmodified _LVDQRVAEY_ ENSG00000143157|ENST00000367876|POGK 51.41523569358685 0.0372669606867193 2 {I|L}VDV{[QG]|[NA]}W{I|L}Y 9 5 + 63.386 0.0 0.0 5.8069 5.8069 79.174 0.0 0.0 0.0 29.30832071423822 5.4818513327305 5.4818513327305 3.0102999566398125 0 1.4564608101803795 2.0 0.0 0.25 {I|L}VDV{[QG]|[NA]}W{I|L}Y;{I|L}VDQ[VG]W{I|L}Y;{I|L}VDV{[QG]|[NA]}[HD]{I|L}P;{I|L}VDV{[QG]|[NA]}[HD]P{I|L};{I|L}VDQ[VG][HD]{I|L}P;{I|L}VDQ[VG][HD]P{I|L};{I|L}VDV[Y{I|L}][HA]Y;{I|L}VDV{[QG]|[NA]}[Y{I|L}]W;{I|L}VDV{[QG]|[NA]}WY{I|L};{I|L}VDQ[NP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F} 5.8069;5.5311;5.217;5.204;4.9413;4.9282;4.5626;4.496;4.4886;4.2775 -;-;-;-;-;-;-;-;-;- 811 + 1 1.873 94745.2 1.0 2012 3304 5308 DOHH2_400M_050219_2,5318 DOHH2_400M_050219_2,5318,LVDQRVAEY True True LVDQRVAEY 27.821131 546.790209949017 5545150.5 5308.0 ENSG00000143157|ENST00000367876|POGK 5.892331123352051 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5319 27.824 140.0 699700.0 25 0 254820.0 + -1 FGLARAKSV 9 84 474.2885973927482 473.2813209261482 1 474.2881347537041 MULTI CID FTMS 0 0 0 5308 368129.375 0.5018075934087972 -8 0.6725978851318359 11 nc|ENSG00000058091|O94921-2|CDK14;nc|ENSG00000117266|Q07002-3|CDK18;ENST00000504648.5_1_1:205492597-205500503:+|nuORF;ENST00000506489.1_1_1:205496975-205497827:+|nuORF;ENSG00000059758|ENST00000261211|CDK17;ENST00000505932.5_1_1:205492708-205498898:+|nuORF;nc|ENSG00000058091|O94921-3|CDK14;ENSG00000058091|ENST00000380050|CDK14;ENST00000489617.5_1_1:205496852-205498898:+|nuORF;ENSG00000117266|ENST00000429964|CDK18;ENST00000550971.5_1_12:96677414-96688846:-|nuORF;nc|ENSG00000059758|Q00537-2|CDK17 2 [R{I|L}]W 3 -1 [R{I|L}] + + 14.604 2.2185 0.82413 3.0857 3.0857 49.01 0.0 0.0 0.0 0.0 2.380521827513532 0.0 0.0 0 0.0 0.0 0.0 0.0 [R{I|L}]W 3.0857 - 19 + 1 1.873 83598.1 1.0 2013 3304 5308 DOHH2_400M_050219_2,5319 DOHH2_400M_050219_2,5319, False False FGLARAKSV 27.823941 474.288134753704 1140755.25 5308.0 nc|ENSG00000058091|O94921-2|CDK14;;nc|ENSG00000117266|Q07002-3|CDK18;;ENST00000504648.5_1_1:205492597-205500503:+|nuORF;;ENST00000506489.1_1_1:205496975-205497827:+|nuORF;;ENSG00000059758|ENST00000261211|CDK17;;ENST00000505932.5_1_1:205492708-205498898:+|nuORF;;nc|ENSG00000058091|O94921-3|CDK14;;ENSG00000058091|ENST00000380050|CDK14;;ENST00000489617.5_1_1:205496852-205498898:+|nuORF;;ENSG00000117266|ENST00000429964|CDK18;;ENST00000550971.5_1_12:96677414-96688846:-|nuORF;;nc|ENSG00000059758|Q00537-2|CDK17 3.999563455581665 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5321 27.829 30.0 2520200.0 25 0 692310.0 + 18545 LAAARLAAA 9 56 414.25840645872 826.50225998424 2 414.2583495974541 MULTI CID FTMS 0 0 0 5320 1345142.125 0.0157316216416361 6 -0.3607902526855469 1 Unmodified _LAAARLAAA_ ENSG00000167004|ENST00000300289|PDIA3;ENST00000469684.1_1_15:44038662-44048907:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF 36.04419817259434 0.0971720506436186 2 {I|L}AA 3 6 48.857 0.0 0.0 5.9112 0.0 0.0 0.0 568.3209932916624 568.3209932916624 35.75765943524473 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + {I|L}AA 5.9112 + + 22 + 1 1.873 62452.5 1.0 2014 3305 5320 DOHH2_400M_050219_2,5321 DOHH2_400M_050219_2,5321,LAAARLAAA True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5322 27.831 133.0 389610.0 25 0 22861.0 32786 SEEHRDLAL 9 100 535.26735980417 1068.52016667514 2 535.2673828005791 MULTI CID FTMS 0 0 0 5320 375521.90625 0.0185952011952723 6 -0.3607902526855469 2 Unmodified _SEEHRDLAL_ ENSG00000104413|ENST00000433389|ESRP1;nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1 26.88365393820708 0.1891292719743517 2 QDT[WK]A{I|L} 7 7 55.332 0.0 0.0 5.1784 0.0 0.0 208.08506032924 0.0 208.08506032924 0.0 42.857485828312285 0.0 0.0 0 2.638210492164445 0.0 0.4247425010840047 0.2887254899964357 QDT[WK]A{I|L} 5.1784 - 187 + 1 1.873 48583.8 1.0 2015 3305 5320 DOHH2_400M_050219_2,5322 DOHH2_400M_050219_2,5322,SEEHRDLAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5323 27.835 170.0 358460.0 25 0 46905.0 + 7172 EEPPSKPSF 9 94 509.2480907567701 1016.4816285803404 2 509.2482177615166 MULTI CID FTMS 0 0 0 5320 213453.375 0.6862855382560159 3 -0.1413555145263672 3 Unmodified _EEPPSKPSF_ ENSG00000186185|ENST00000593135|KIF18B;nc|ENSG00000186185|Q86Y91-6|KIF18B 20.41453444215458 0.284085796332423 2 EEPPSK{M(Oxidation (M))|F}[PS] 9 2 + 46.484 0.0 0.0 4.573 4.573 79.413 0.0 0.0 0.0 35.101650736610274 5.229079746865175 5.229079746865175 7.893278405656204 0 0.3807196863200844 2.0 0.2887254899964357 0.0 EEPPSK{M(Oxidation (M))|F}[PS];EEPPSK[PS]{M(Oxidation (M))|F};EEPP{[HG]|PP}[TP][PG];EEPP{[HG]|PP}[PA][PS];EEPPGK[DV]{M(Oxidation (M))|F};EEP[YK][TP][PG];EEP[YK][PA][PS] 4.573;3.7965;3.2427;3.2306;3.2288;2.6001;2.588 -;+;-;-;-;-;- + 136 + 1 1.873 55716.8 1.0 2016 3305 5320 DOHH2_400M_050219_2,5323 DOHH2_400M_050219_2,5323,EEPPSKPSF False True EEPPSKPSF 27.834653 509.248217761517 7264305.0 5320.0 ENSG00000186185|ENST00000593135|KIF18B;;nc|ENSG00000186185|Q86Y91-6|KIF18B 7.050060113271077 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5324 27.84 279.0 352950.0 25 0 66968.0 + 40548 VKACSSKIEAY 11 93 400.2103260993273 0 400.2085143923759 PEAK CID FTMS 0 0 0 5320 159365.671875 1.0 0 0.0 4 Unmodified _VKACSSKIEAY_ REV__ENSG00000172046|ENST00000417901|USP19;REV__nc|ENSG00000172046|O94966-2|USP19;REV__nc|ENSG00000172046|O94966-3|USP19;REV__nc|ENSG00000172046|O94966-4|USP19;REV__nc|ENSG00000172046|O94966-5|USP19;REV__nc|ENSG00000172046|O94966-7|USP19;REV__nc|ENSG00000172046|O94966|USP19 5.731851221503515 0.47618401536486 2 M 1 -1 6.9897 0.0 0.0 0.87546 0.0 0.0 564.2686003414296 100.07734094791248 664.3459412893421 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.87546 - 8 + 1 1.873 80600.8 1.0 2017 3305 5320 DOHH2_400M_050219_2,5324 DOHH2_400M_050219_2,5324,VKACSSKIEAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5325 27.849 499.0 233260.0 25 0 12949.0 + 501 AEGTEEGARW 10 138 553.2479768160008 1104.4814006988015 2 553.2481567263603 MULTI CID FTMS 0 0 0 5320 148530.171875 1.0 0 0.0 5 Unmodified _AEGTEEGARW_ ENSG00000135506|ENST00000315970|OS9;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-4|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-8|OS9 51.41523569358685 0.0718446036348414 2 {[CP]|[EA]}GTEEQRW 9 2 + 62.282 0.0 0.0 5.639 5.639 76.981 0.0 0.0 0.0 50.06353850590035 10.908458057352185 10.908458057352185 1.9188552623891293 0 1.031234684152075 0.0 0.8494850021680094 0.0 {[CP]|[EA]}GTEEQRW;{[CP]|[EA]}GTEEGARW;{[CP]|[EA]}GTEWARW;{[CP]|[EA]}GETEQRW;{[CP]|[EA]}GETEGARW;{[CP]|[EA]}WTEQRW;{[CP]|[EA]}GETWARW;{[CP]|[EA]}WTEGARW;{[CP]|[EA]}GTEEG[H{I|L}]Y;{[CP]|[EA]}GTEEHHVP 5.639;5.4653;4.8739;4.8225;4.6487;4.214;4.0573;4.0354;3.9347;3.5265 -;+;-;-;-;-;-;-;-;- + 1063 + 1 1.873 93796.9 1.0 2018 3305 5320 DOHH2_400M_050219_2,5325 DOHH2_400M_050219_2,5325,AEGTEEGARW True True AEGTEEGARW 27.848591 553.24815672636 850001.5625 5320.0 nc|ENSG00000135506|Q13438-4|OS9;;nc|ENSG00000135506|Q13438-3|OS9;;nc|ENSG00000135506|Q13438-5|OS9;;nc|ENSG00000135506|Q13438-7|OS9;;nc|ENSG00000135506|Q13438-6|OS9;;nc|ENSG00000135506|Q13438-2|OS9;;nc|ENSG00000135506|Q13438-8|OS9;;ENSG00000135506|ENST00000315970|OS9 7.252022743225098 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5326 27.859 622.0 309860.0 25 0 25217.0 + 2130 APVPAPERK 9 149 482.78244272485216 963.5503325165045 2 482.7819702029228 MULTI CID FTMS 0 0 0 5320 127194.2265625 0.099531781531517 -6 0.5052490234375 6 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 32.30548876998284 0.1201446275138228 2 APAPV 5 -1 70.433 0.0 0.0 7.3097 0.0 0.0 0.0 525.2792173705964 525.2792173705964 41.47095285566838 0.0 0.0 0.0 0 1.548455006504028 1.6989700043360187 0.0 0.0 APAPV 7.3097 - 663 + 1 1.873 148542.6 1.0 2019 3305 5320 DOHH2_400M_050219_2,5326 DOHH2_400M_050219_2,5326,APVPAPERK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5327 27.863 158.0 440750.0 25 0 61282.0 19160 LEDKMKAH 8 103 486.2523151375994 0 486.2535278201103 PEAK CID FTMS 0 0 0 5320 372177.1875 1.0 0 0.0 7 Unmodified _LEDKMKAH_ ENSG00000069248|ENST00000261396|NUP133 12.531546534597751 0.5131024102181418 2 E 1 7 10.797 0.0 0.0 1.1125 0.0 0.0 756.3583309814504 82.06684290103749 838.4251738824879 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + E 1.1125 + + 29 + 1 1.873 62656.0 1.0 2020 3305 5320 DOHH2_400M_050219_2,5327 DOHH2_400M_050219_2,5327,LEDKMKAH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5328 27.866 172.0 745500.0 25 0 151050.0 + 3524 CTQFFKEEF 9 116 393.5122954116092 1177.5150568350275 3 393.5121032595634 MULTI CID FTMS 0 0 0 5320 216395.9375 0.7927213606746134 -1 0.0587062835693359 8 Unmodified _CTQFFKEEF_ REV__ENSG00000143324|ENST00000367590|XPR1;REV__nc|ENSG00000143324|Q9UBH6-2|XPR1 15.847184025352805 0.4077185912009129 2 [{I|L}V][{M(Oxidation (M))|F}E]EHE 7 -1 29.187 0.0 0.0 2.4787 0.0 0.0 0.0 291.0984699410189 291.0984699410189 9.181985352060664 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8252574989159953 0.0 [{I|L}V][{M(Oxidation (M))|F}E]EHE 2.4787 - 247 1 1.873 102286.9 1.0 2021 3305 5320 DOHH2_400M_050219_2,5328 DOHH2_400M_050219_2,5328,CTQFFKEEF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5329 27.87 246.0 344480.0 25 0 59431.0 + 187 AAPAAPGPGY 10 98 436.2180009382781 0 436.2187072634697 PEAK CID FTMS 0 0 0 5320 141326.828125 1.0 0 0.0 9 Unmodified _AAPAAPGPGY_ REV__ENSG00000113722|ENST00000231656|CDX1 7.910154910731844 0.390667355440674 2 A 1 -1 6.9897 0.0 0.0 0.80302 0.0 0.0 97.99619193441386 698.3665255182249 796.3627174526388 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.80302 + + 28 + 1 1.873 70916.8 1.0 2022 3305 5320 DOHH2_400M_050219_2,5329 DOHH2_400M_050219_2,5329,AAPAAPGPGY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5331 27.875 34.0 958840.0 25 0 62123.0 + -1 SRPDSILGMQF 11 63 633.8106420587354 1265.6067311842708 2 633.8109008669853 MULTI CID FTMS 0 0 0 5330 1356379.125 0.3115660512277233 2 -0.0947818756103515 1 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 20.41453444215458 0.6105011870913812 2 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 54.561 0.0 0.0 4.3111 4.3111 72.763 0.0 0.0 0.0 2.887254899964361 7.051572817950586 2.887254899964361 2.887254899964361 0 0.9291746928241124 0.0 0.4247425010840047 1.0387254899964358 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 4.3111;4.0829;3.587;3.587;3.3588;3.3588;2.8657;2.6375 -;-;-;-;-;-;-;- 247 1 1.876 32446.5 1.0 2023 3306 5330 DOHH2_400M_050219_2,5331 DOHH2_400M_050219_2,5331,SRPDSILGMQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5332 27.877 63.0 975780.0 25 0 58760.0 + 41288 VPHTRPVSL 9 88 503.2957129512363 1004.5768729692726 2 503.2956725955009 MULTI CID FTMS 0 0 0 5330 506887.9375 0.0681007901572468 5 -0.3142166137695312 2 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 47.74868867922204 0.0453060283459952 2 VPHTR 5 4 62.07 0.0 0.0 6.1787 0.0 0.0 0.0 411.2254427545532 411.2254427545532 50.81088087956136 0.0 0.0 0.0 0 0.5866968715561641 1.2218487496163564 1.2302046884880935 0.0 + VPHTR 6.1787 + + 196 + 1 1.876 51079.2 1.0 2024 3306 5330 DOHH2_400M_050219_2,5332 DOHH2_400M_050219_2,5332,VPHTRPVSL True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5333 27.88 178.0 429920.0 25 0 32091.0 + 7140 EENFPENKEY 10 105 649.7804967672452 1297.5464406012902 2 649.7806274294853 MULTI CID FTMS 0 0 0 5330 282776.59375 0.7155838363485248 -5 0.3331832885742187 3 Unmodified _EENFPENKEY_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 49.52724829834842 0.0829255630816734 2 {[QN]|[E{I|L}]|[KN]}EP{M(Oxidation (M))|F}Y{M(Oxidation (M))|F} 7 8 39.138 0.0 0.0 3.0163 0.0 0.0 0.0 369.10760969468 369.10760969468 7.253778266892432 0.0 0.0 0.0 0 0.6694451763165201 0.0 1.4634679910804405 0.5994850021680094 {[QN]|[E{I|L}]|[KN]}EP{M(Oxidation (M))|F}Y{M(Oxidation (M))|F} 3.0163 - 825 1 1.876 63053.6 1.0 2025 3306 5330 DOHH2_400M_050219_2,5333 DOHH2_400M_050219_2,5333,EENFPENKEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5334 27.887 390.0 223860.0 25 0 18796.0 + 38458 TSDDVKEQIY 10 122 599.285144557565 1196.55573618193 2 599.2853881716728 MULTI CID FTMS 0 0 0 5330 219189.46875 0.0346429266002497 5 -0.3142166137695312 4 Unmodified _TSDDVKEQIY_ ENSG00000110700|ENST00000525634|RPS13;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000534329.1_1_11:17098694-17099257:-|nuORF 63.22749603027936 0.0281198777558511 2 {[MG]|[TS]}DDV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}Y 10 0 + 51.644 0.0 0.0 4.316 4.316 79.617 0.0 0.0 0.0 6.474828941955721 34.65401343456786 6.474828941955721 9.164539485499247 0 2.6237125054200234 0.0 1.3522338482433751 0.0 + + {[MG]|[TS]}DDV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}Y;{[MG]|[TS]}DDV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]{I|L}Y;{[MG]|[TS]}D[VS]{[RE]|[WV]}Q{I|L}Y;[SG][C(Carbamidomethyl (C))N]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}Y;{[MG]|[TS]}D[VS][QP]ST{I|L}Y;{[HG]|PP}[YC(Carbamidomethyl (C))]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}Y;AAD{[HG]|PP}[WH]Q{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[HG]|PP}[WH]Q{I|L}Y;AAP[DP][WH]Q{I|L}Y;AAP{[{M(Oxidation (M))|F}C]|[YS]}[QP]ST{I|L}Y 4.316;3.5501;2.0129;1.8757;1.4549;1.3336;1.1815;1.1045;0.76253;0.23913 +;-;-;-;-;-;-;-;-;- + 233 1 1.876 68198.0 1.0 2026 3306 5330 DOHH2_400M_050219_2,5334 DOHH2_400M_050219_2,5334,TSDDVKEQIY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5335 27.896 519.0 199260.0 25 0 19825.0 + -1 HADVSNQLY 9 119 522.7412331060301 1043.46791327886 2 523.7482177615166 MULTI CID FTMS 0 0 0 5330 143160.0 0.7007729639969538 -3 0.1790046691894531 5 Carbamidomethyl (C) _HEGVSIC(Carbamidomethyl (C))KD_ ENSG00000147416|ENST00000276390|ATP6V1B2 11.640296217721598 0.521594087909532 2 [HA]DVSNQHH 9 -1 + 42.628 0.0 0.0 4.0852 4.0852 79.917 0.0 0.0 0.0 1.6934746919729804 31.82598814831266 1.6934746919729804 9.208187539523747 0 0.0 0.0 1.4489700043360187 0.4247425010840047 [HA]DVSNQHH;[HA]DVSGGQHH;[HA]DVSN[AG]HH;[HA][VS]DNQHH;[PS][HT]SNQHH;{[ES]|[DT]|[{I|L}C]}[RH]NQHH;[HS][VP]ND{[NV]|[RG]}Y;{[QS]|[NT]}[YR]D{[NV]|[RG]}Y;[HA]DVSGG[AG]HH;[HA][TA]ENQHH 4.0852;3.2028;3.2028;2.4338;2.2457;2.0459;2.0445;1.9311;1.9174;1.8078 -;-;-;-;-;-;-;-;-;- 741 1 1.876 85247.6 1.0 2027 3306 5330 DOHH2_400M_050219_2,5335 DOHH2_400M_050219_2,5335,HEGVSICKD False False HADVSNQLY 27.896484 523.748217761517 1520702.75 5330.0 ENSG00000147416|ENST00000276390|ATP6V1B2 8.385038534800211 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5336 27.901 237.0 306920.0 25 0 31321.0 + 36901 TEQPPPRSW 9 101 549.2724238958491 1096.530294858498 2 549.2717773318291 MULTI CID FTMS 0 0 0 5330 122756.765625 0.2685495065059505 10 -0.6134014129638672 6 Unmodified _TEQPPPRSW_ ENSG00000113300|ENST00000261951|CNOT6 23.78978130925829 0.2284941198415988 2 [AG]YRPPP 7 7 33.236 0.0 0.0 3.031 0.0 0.0 0.0 355.1258209940234 355.1258209940234 20.13692403904788 0.0 0.0 0.0 0 0.5 2.0 0.0 0.4247425010840047 [AG]YRPPP 3.031 - 180 1 1.876 61841.4 1.0 2028 3306 5330 DOHH2_400M_050219_2,5336 DOHH2_400M_050219_2,5336,TEQPPPRSW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5337 27.915 800.0 106750.0 25 0 15214.0 36737 TDSDEDIRETY 11 135 672.2839017755534 1342.5532506179068 2 672.2830078005791 MULTI CID FTMS 0 0 0 5330 130677.296875 0.3885613456831524 6 -0.4313869476318359 7 Unmodified _TDSDEDIRETY_ ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A 8.745405648335112 0.8338865417133445 2 [Y{M(Oxidation (M))|F}]T{I|L} 4 10 31.682 0.0 0.0 2.3599 0.0 0.0 0.0 815.2877901666624 815.2877901666624 6.906140654642812 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [Y{M(Oxidation (M))|F}]T{I|L} 2.3599 - 503 + 1 1.876 66850.6 0.6700000166893005 2029 3306 5330 DOHH2_400M_050219_2,5337 DOHH2_400M_050219_2,5337,TDSDEDIRETY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5338 27.921 338.0 286270.0 25 0 32425.0 + 39501 VASFKHAL 8 106 436.75298722679065 871.4914215203813 2 436.7528564333916 MULTI CID FTMS 0 0 0 5330 115703.7265625 0.463654149238506 -2 0.1052799224853515 8 Unmodified _VASFKHAL_ ENSG00000172062|ENST00000380707|SMN1;ENSG00000205571|ENST00000380743|SMN2;nc|ENSG00000205571|Q16637-2|SMN1;nc|ENSG00000205571|Q16637-3|SMN1;nc|ENSG00000205571|Q16637-4|SMN1 36.04419817259434 0.3004715606373109 2 VAS{M(Oxidation (M))|F}KHA{I|L} 8 0 + 61.769 0.0 0.0 7.0877 7.0877 86.466 0.0 0.0 0.0 36.40978057358332 6.020599913279625 6.020599913279625 6.020599913279625 0 0.4247425010840047 2.0 0.0 0.0 + + VAS{M(Oxidation (M))|F}KHA{I|L};VAS{M(Oxidation (M))|F}KH{I|L}A;VAS{M(Oxidation (M))|F}K{I|L}HA 7.0877;6.3969;6.0515 +;-;- + 216 + 1 1.876 77155.5 1.0 2030 3306 5330 DOHH2_400M_050219_2,5338 DOHH2_400M_050219_2,5338,VASFKHAL False True VASFKHAL 27.920888 436.752856433392 1070316.125 5330.0 ENSG00000205571|ENST00000380743|SMN2;;nc|ENSG00000205571|Q16637-2|SMN1;;nc|ENSG00000205571|Q16637-4|SMN1;;nc|ENSG00000205571|Q16637-3|SMN1;;ENSG00000172062|ENST00000380707|SMN1 5.972579479217529 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5339 27.923 78.0 875900.0 25 0 512270.0 28343 PSAWPLFLDG 10 55 368.18912783157504 1101.5455540949251 3 368.1888610720634 MULTI CID FTMS 0 0 0 5330 783686.0 0.3084093622035941 3 -0.1339530944824218 9 Unmodified _PSAWPLFLDG_ ENST00000569380.5_1_16:1827975-1828401:-|nuORF 1.4819007175156935 0.719781833666733 2 {I|L} 1 9 9.8329 0.0 0.0 0.89264 0.0 0.0 970.450734003908 0.0 970.450734003908 0.0 3.379231027444405 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.89264 + + 8 + 1 1.876 62080.5 1.0 2031 3306 5330 DOHH2_400M_050219_2,5339 DOHH2_400M_050219_2,5339,PSAWPLFLDG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5341 27.928 127.0 413220.0 25 0 56564.0 + 12287 GRTGPTGY 8 84 404.7027871779939 807.3910214227878 2 404.7028076052666 MULTI CID FTMS 0 0 0 5340 254842.859375 0.3252358756006515 3 -0.1617069244384765 1 Unmodified _GRTGPTGY_ REV__ENST00000554295.1_1_12:98850353-98850914:-|nuORF 5.230669730166228 0.792582437072536 2 Y 1 -1 15.485 0.0 0.0 1.9179 0.0 0.0 626.3166175915363 0.0 626.3166175915363 0.0 10.880456295278409 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.9179 + + 16 + 1 1.876 47259.1 1.0 2032 3307 5340 DOHH2_400M_050219_2,5341 DOHH2_400M_050219_2,5341,GRTGPTGY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5342 27.942 800.0 111770.0 25 0 11247.0 + -1 FDQGCEECTY 10 118 626.2178736695523 1250.4211944059043 2 626.2173950076103 MULTI CID FTMS 0 0 0 5340 131206.125 0.2003940874285308 3 -0.1617069244384765 2 Carbamidomethyl (C) _FDQGC(Carbamidomethyl (C))EECTY_ REV__ENSG00000185177|ENST00000319636|ZNF479 14.838274106304384 0.5985701837916485 2 QTYETY 6 -1 48.026 0.0 0.0 3.8408 0.0 0.0 447.0876026837906 0.0 447.0876026837906 0.0 11.60650842086838 0.0 0.0 0 1.1549471895720984 0.0 0.6549471895720984 1.3807196863200843 QTYETY 3.8408 - 466 1 1.876 71017.3 0.8299999833106995 2033 3307 5340 DOHH2_400M_050219_2,5342 DOHH2_400M_050219_2,5342,FDQGCEECTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5343 27.943 51.0 1213000.0 25 0 505920.0 -1 HICCCCLLY 9 66 592.7386688796089 1183.4627848260177 2 592.7391235232353 MULTI CID FTMS 0 0 0 5340 687157.8125 1.0 0 0.0 3 2 Carbamidomethyl (C) _HIC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCLLY_ ENSG00000145808|ENST00000274487|ADAMTS19;nc|ENSG00000145808|Q8TE59|ADAMTS19 9.347437153973935 0.588369872918737 2 {I|L}SD[C(Carbamidomethyl (C))M]Y 6 -1 29.13 0.0 0.0 2.4614 0.0 0.0 396.1621389293365 0.0 396.1621389293365 0.0 -1.595887232835267 -1.595887232835267 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 {I|L}SD[C(Carbamidomethyl (C))M]Y 2.4614 - 55 + 1 1.876 52603.1 1.0 2034 3307 5340 DOHH2_400M_050219_2,5343 DOHH2_400M_050219_2,5343,HICCCCLLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5344 27.957 800.0 161300.0 25 0 17183.0 -1 SFMDVSNPFY 10 124 611.7593439675642 1221.5041350019285 2 611.7587158083916 MULTI CID FTMS 0 0 0 5340 107807.2109375 0.50173065573451 -2 0.0987758636474609 4 Oxidation (M) _SFM(Oxidation (M))DVSNPFY_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 30.63653989081413 0.2803493085145199 2 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 98.445 0.0 0.0 8.0593 8.0593 91.709 0.0 0.0 0.0 13.212112250009652 74.87811920570198 13.212112250009652 9.164539485499262 0 0.9247425010840048 0.744727494896694 1.3882104921644451 1.274227503252014 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;{[CP]|[EA]}[HD]QQNA{M(Oxidation (M))|F}Y;{[CP]|[EA]}QHDQNA{M(Oxidation (M))|F}Y;[AG]N[YE]{[CA]|SS}NA{M(Oxidation (M))|F}Y 8.0593;7.309;7.309;7.309;6.5617;6.5617;6.5617;5.6782;5.1817;5.1045 -;-;-;-;-;-;-;-;-;- 3175 1 1.876 97059.1 0.6399999856948853 2035 3307 5340 DOHH2_400M_050219_2,5344 DOHH2_400M_050219_2,5344,SFMDVSNPFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5345 27.965 475.0 362190.0 25 0 99692.0 + 31454 RPRGPEGVGSL 11 137 562.8115127024572 1123.6084724717143 2 562.8113891482353 MULTI CID FTMS 0 0 0 5340 138621.625 0.112707426350154 -4 0.2312068939208984 5 Unmodified _RPRGPEGVGSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 26.120906184454547 0.478875788770541 2 [VG]P 3 9 30.644 0.0 0.0 2.7273 0.0 0.0 0.0 867.4308565729124 867.4308565729124 7.815534267690356 0.0 0.0 0.0 0 0.6462566630072955 2.0 0.0 0.0 [VG]P 2.7273 - 773 + 1 1.876 133705.8 1.0 2036 3307 5340 DOHH2_400M_050219_2,5345 DOHH2_400M_050219_2,5345,RPRGPEGVGSL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5347 27.97 86.0 550530.0 25 0 37862.0 + 33071 SEQSLGQKL 9 86 495.2668136382204 988.5190743432408 2 495.2666198611259 MULTI CID FTMS 0 0 0 5346 484442.125 0.2409769587064383 3 -0.2194347381591797 1 Unmodified _SEQSLGQKL_ ENSG00000104738|ENST00000649973|MCM4 85.64151623876279 0.0161498729896241 2 {[ES]|[DT]|[{I|L}C]}QS{I|L}GQK{I|L} 9 0 + 56.692 0.0 0.0 5.735 5.735 86.458 0.0 0.0 0.0 44.90919605914813 10.968878562567532 10.968878562567532 9.208187539523747 0 1.2302046884880935 0.0 0.5 0.7742275032520141 + + {[ES]|[DT]|[{I|L}C]}QS{I|L}GQK{I|L};{[ES]|[DT]|[{I|L}C]}[AG]S{I|L}GQK{I|L};{[ES]|[DT]|[{I|L}C]}QS{I|L}G[AG]K{I|L};{[ES]|[DT]|[{I|L}C]}[AG]S{I|L}G[AG]K{I|L};{[MG]|[TS]}KK{I|L}SYY;{[QG]|[NA]}{I|L}S{[NV]|[RG]}R{[ES]|[DT]|[{I|L}C]};{[QS]|[NT]}{[VA]|[{I|L}G]}{[NV]|[RG]}R{[ES]|[DT]|[{I|L}C]};{[QG]|[NA]}K{[RE]|[WV]}R{[ES]|[DT]|[{I|L}C]} 5.735;4.8035;4.8035;3.8764;3.4668;0.51999;0.41414;0.2182 +;-;-;-;-;-;-;- + 140 + 1 1.876 40222.0 1.0 2037 3308 5346 DOHH2_400M_050219_2,5347 DOHH2_400M_050219_2,5347,SEQSLGQKL True True SEQSLGQKL 27.969973 495.266619861126 18402322.0 5346.0 ENSG00000104738|ENST00000649973|MCM4 7.039514700571696 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5348 27.975 287.0 328650.0 25 0 63750.0 36736 TDSDEDIRETY 11 93 448.5247830030268 1342.5525196092804 3 448.5246154665947 MULTI CID FTMS 0 0 0 5346 166433.140625 0.3527556127762607 7 -0.4951686859130859 2 Unmodified _TDSDEDIRETY_ ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A 3.2813086475875832 0.8596665074481906 2 {M(Oxidation (M))|F}TY 3 9 26.198 0.0 0.0 1.9513 0.0 0.0 913.372036124238 0.0 913.372036124238 0.0 15.713337517843655 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {M(Oxidation (M))|F}TY 1.9513 - 51 + 1 1.876 76830.2 1.0 2038 3308 5346 DOHH2_400M_050219_2,5348 DOHH2_400M_050219_2,5348,TDSDEDIRETY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5349 27.977 82.0 982960.0 25 0 114270.0 + 32959 SELPTAKEY 9 97 519.2608047386775 1036.507056544155 2 519.2614013552666 MULTI CID FTMS 0 0 0 5346 525923.125 0.4419488634119574 -2 0.0947818756103515 3 Unmodified _SELPTAKEY_ ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;ENST00000569448.1_1_16:8993400-8995074:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7 36.506200033944 0.094635877243972 2 {[ES]|[DT]|[{I|L}C]}{I|L}PT 5 4 30.493 0.0 0.0 2.9419 0.0 0.0 0.0 506.2255953424438 506.2255953424438 14.298428400755544 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.4247425010840047 0.0 + {[ES]|[DT]|[{I|L}C]}{I|L}PT 2.9419 + + 162 + 1 1.876 65936.2 1.0 2039 3308 5346 DOHH2_400M_050219_2,5349 DOHH2_400M_050219_2,5349,SELPTAKEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5350 27.979 74.0 1249700.0 25 0 191510.0 -1 TECERKEKT 9 99 394.1919122405805 1179.5539073219416 3 394.1917297244072 MULTI CID FTMS 0 0 0 5346 410812.0 0.5776104456138637 -1 0.0425796508789062 4 Carbamidomethyl (C) _TEC(Carbamidomethyl (C))ERKEKT_ ENST00000511083.1_1_4:148427485-148427695:+|nuORF 12.872603262515298 0.4882369880199512 2 {[ET]|[MV]}SYSYKR{M(Oxidation (M))|F} 9 -1 {[ET]|[MV]} + + 45.887 -0.16712 -0.072633 3.8902 3.8902 51.32 0.0 0.0 0.0 0.0 24.917858145950795 0.0 0.0 0 0.2302046884880938 0.0 0.0 0.4247425010840047 {[ET]|[MV]}SYSYKR{M(Oxidation (M))|F} 3.8902 - 117 + 1 1.876 80228.8 1.0 2040 3308 5346 DOHH2_400M_050219_2,5350 DOHH2_400M_050219_2,5350,TECERKEKT False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5351 27.983 233.0 496190.0 25 0 50299.0 + 29137 QETSFTKEAY 10 138 602.2797271482675 1202.544901363335 2 602.2793456912041 MULTI CID FTMS 0 0 0 5346 314162.53125 0.1717669419507345 -2 0.0947818756103515 5 Unmodified _QETSFTKEAY_ ENSG00000133112|ENST00000530705|TPT1;ENST00000533567.5_1_13:45912892-45914385:-|nuORF;nc|ENSG00000133112|P13693-2|TPT1 37.07464296494664 0.1884581770199685 2 [QA]AEKTESE[NP] 11 8 + 44.02 0.0 0.0 3.6605 3.6605 72.768 0.0 0.0 0.0 21.24500341250357 1.9938183320066043 1.9938183320066043 4.454580860690307 0 0.8935078169319297 0.0 1.066901560044258 1.674742501084005 [QA]AEKTESE[NP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TSETKE[HD];[QA]AEKWME[NP];[QA]AEKTESQ[DP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TMWKE[HD];[QA]AEKTESEG[PG];[NP]{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TKE[HD];[QA]AEKWMQ[DP];[QA]AEKWMEG[PG];[QA]AEKTYY{[ET]|[MV]} 3.6605;3.2901;3.0878;2.7631;2.721;2.2423;2.2169;2.1903;1.8744;1.8007 -;-;-;-;-;-;-;-;-;- 4215 + 1 1.876 83380.8 1.0 2041 3308 5346 DOHH2_400M_050219_2,5351 DOHH2_400M_050219_2,5351,QETSFTKEAY False True QETSFTKEAY 27.983183 602.279345691204 9142333.0 5346.0 ENSG00000133112|ENST00000530705|TPT1;;nc|ENSG00000133112|P13693-2|TPT1;;ENST00000533567.5_1_13:45912892-45914385:-|nuORF 8.123072465260824 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5352 27.991 445.0 263360.0 25 0 37518.0 + -1 GLMMYIYLQ 9 115 582.2750360118017 1162.535519090403 2 582.2748290896416 MULTI CID FTMS 0 0 0 5346 143236.4375 0.9897941566599058 -1 0.0425796508789062 6 2 Oxidation (M) _GLM(Oxidation (M))M(Oxidation (M))YIYLQ_ REV__nc|ENSG00000290684|A6NFC9|OR2W5P 32.116972079565 0.1225432171549407 2 {[VA]|[{I|L}G]}D[PG][WM]{M(Oxidation (M))|F}{I|L}Q 10 -1 + 35.411 0.0 0.0 3.046 3.046 65.731 0.0 0.0 0.0 2.5354664879055377 8.29766987853148 2.5354664879055377 0.4139268515822465 0 0.9247425010840048 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}D[PG][WM]{M(Oxidation (M))|F}{I|L}Q;{[VA]|[{I|L}G]}D[{M(Oxidation (M))|F}V]EA[DG]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}[DP][WM]{M(Oxidation (M))|F}{I|L}Q;{[VA]|[{I|L}G]}G[DP][WM]{M(Oxidation (M))|F}{I|L}Q;{[VA]|[{I|L}G]}D[{M(Oxidation (M))|F}V]EA{[RE]|[WV]}Q;{[VA]|[{I|L}G]}D[{M(Oxidation (M))|F}V]EA{M(Oxidation (M))|F}{[YC]|[HE]};[KA][HC][WM]{M(Oxidation (M))|F}{I|L}Q;{[VA]|[{I|L}G]}D[{M(Oxidation (M))|F}V]EK{NN|[MP]|[D{I|L}]|[EV]}Q;{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]DA[DG]{I|L}Q;{[CA]|SS}{I|L}[SG]AERHGY 3.046;3.0104;2.5118;2.3467;2.0146;1.9082;1.8999;1.7557;1.5406;1.0518 -;-;-;-;-;-;-;-;-;- 379 1 1.876 90168.3 1.0 2042 3308 5346 DOHH2_400M_050219_2,5352 DOHH2_400M_050219_2,5352,GLMMYIYLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5353 28.002 595.0 225480.0 25 0 32869.0 + 15898 ISSPLTVEL 9 146 479.7756614613776 957.5367699895552 2 479.7743713259697 MULTI CID FTMS 0 0 0 5346 106814.03125 1.0 0 0.0 7 Unmodified _ISSPLTVEL_ REV__ENSG00000101842|ENST00000217957|VSIG1;REV__nc|ENSG00000101842|Q86XK7-2|VSIG1 16.942295170755138 0.3780752226737986 2 D{I|L}[VG]E 5 -1 36.51 0.0 0.0 3.8129 0.0 0.0 0.0 441.28220544986567 441.28220544986567 23.41129063296272 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3807196863200844 0.0 D{I|L}[VG]E 3.8129 - 241 + 1 1.876 106511.7 1.0 2043 3308 5346 DOHH2_400M_050219_2,5353 DOHH2_400M_050219_2,5353,ISSPLTVEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5354 28.004 143.0 244830.0 25 0 20190.0 + 32438 SADPDNLKY 9 75 511.7447989500272 1021.4750449668544 2 511.7430297732353 MULTI CID FTMS 0 0 0 5346 198241.25 0.193723828264186 4 -0.3366050720214844 8 Unmodified _SADPDNLKY_ ENSG00000157106|ENST00000446231|SMG1 14.838274106304384 0.4350285940865338 2 {[SA]|[TG]}D 3 6 32.447 0.0 0.0 3.1765 0.0 0.0 0.0 745.3557266897637 745.3557266897637 15.993624753846092 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[SA]|[TG]}D 3.1765 + + 27 1 1.876 32312.9 1.0 2044 3308 5346 DOHH2_400M_050219_2,5354 DOHH2_400M_050219_2,5354,SADPDNLKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5356 28.021 800.0 139150.0 25 0 9535.7 -1 ECKECRKCFYQ 11 121 775.8301922281908 1549.6458315231814 2 775.8286620974541 MULTI CID FTMS 0 0 0 5355 135720.46875 0.6777645632094453 3 -0.297433853149414 1 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 34.93206674587334 0.2904649469012649 2 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}YQ 13 -1 + 105.1 0.0 0.0 6.7819 6.7819 79.282 0.0 0.0 0.0 0.6593981127304289 0.0 0.0 0.6593981127304289 0 1.5 0.0 1.1549471895720984 1.798455006504028 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}YQ;[QA]HDEAQQDA{M(Oxidation (M))|F}YK;[QA]DHEAQQDA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}YK;[YE][C(Carbamidomethyl (C))K]AQQDA{M(Oxidation (M))|F}YK;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEA[AG]QDA{M(Oxidation (M))|F}YK;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQ[AG]DA{M(Oxidation (M))|F}YK;[QA]HDEA[AG]QDA{M(Oxidation (M))|F}YK;[QA]HDEAQ[AG]DA{M(Oxidation (M))|F}YK 6.7819;6.7394;6.4559;6.3321;6.3113;6.2993;6.1965;6.1965;6.1539;6.1539 -;-;-;-;-;-;-;-;-;- 2647 1 1.876 81532.9 0.7099999785423279 2045 3309 5355 DOHH2_400M_050219_2,5356 DOHH2_400M_050219_2,5356,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5357 28.024 192.0 715300.0 25 0 62840.0 -1 0 116 352.7204498717737 0 352.7203857302666 PEAK CID FTMS 0 0 0 5355 389043.4375 0.9250519614886086 -1 0.0391712188720703 2 2 VVVPG 5 -1 19.57 0.0 0.0 2.7821 0.0 0.0 181.07498819807432 68.05127893619374 249.1262671342681 0.0 0.0 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.0 VVVPG 2.7821 - 34 + 1 1.876 112691.0 1.0 2046 3309 5355 DOHH2_400M_050219_2,5357 DOHH2_400M_050219_2,5357, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5358 28.029 218.0 398050.0 25 0 23905.0 + 29994 QTDTLQNDY 9 108 549.2413517367715 1096.468150540343 2 549.2405273318291 MULTI CID FTMS 0 0 0 5355 195115.578125 1.0 0 0.0 3 Unmodified _QTDTLQNDY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 24.020572477871973 0.2255576514309169 2 NDY 3 6 19.966 0.0 0.0 1.8209 0.0 0.0 686.3237546436618 0.0 686.3237546436618 0.0 -1.6154804272490395 -1.6154804272490395 0.0 0 0.3054621874040891 0.0 0.0 0.0 + NDY 1.8209 + + 226 + 1 1.876 70932.7 1.0 2047 3309 5355 DOHH2_400M_050219_2,5358 DOHH2_400M_050219_2,5358,QTDTLQNDY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5359 28.033 225.0 299470.0 25 0 24925.0 + 25877 NLHSKYSL 8 104 481.2585934289343 960.5026339246688 2 481.2585327029228 MULTI CID FTMS 0 0 0 5355 179987.921875 0.7467930154089556 1 -0.0799560546875 4 Unmodified _NLHSKYSL_ ENSG00000100162|ENST00000215980|CENPM;ENST00000396437.3_1_22:42341142-42343146:-|nuORF;nc|ENSG00000100162|Q9NSP4-2|CENPM;nc|ENSG00000100162|Q9NSP4-4|CENPM 32.30548876998284 0.3644845974844379 2 {[QV]|[N{I|L}]|[RA]|[KV]}H[KS]YS{I|L} 8 0 + 47.612 0.0 0.0 4.957 4.957 86.492 0.0 0.0 0.0 31.64320017660792 9.412450368561592 9.412450368561592 16.736387966791277 0 0.7742275032520141 2.0 0.3494850021680094 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}H[KS]YS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}H{[CA]|SS}[YK]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}H[KS]{[TV]|[{I|L}S]}Y;{[QV]|[N{I|L}]|[RA]|[KV]}H{[CA]|SS}[K{I|L}]Y;{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))K][KP]CV 4.957;3.2146;2.7145;2.6612;0.76718 +;-;-;-;- + 215 + 1 1.876 53594.5 1.0 2048 3309 5355 DOHH2_400M_050219_2,5359 DOHH2_400M_050219_2,5359,NLHSKYSL False True NLHSKYSL 28.032791 481.258532702923 1118549.5 5355.0 ENST00000396437.3_1_22:42341142-42343146:-|nuORF;;nc|ENSG00000100162|Q9NSP4-4|CENPM;;ENSG00000100162|ENST00000215980|CENPM;;nc|ENSG00000100162|Q9NSP4-2|CENPM 2.905246098836263 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5360 28.038 256.0 405190.0 25 0 45202.0 + 4322 DARQKIGL 8 103 450.7664998857202 899.5184468382405 2 450.7663146853447 MULTI CID FTMS 0 0 0 5355 172174.890625 0.3282465003143294 -1 0.0391712188720703 5 Unmodified _DARQKIGL_ ENSG00000100227|ENST00000252115|POLDIP3;nc|ENSG00000100227|Q9BY77-2|POLDIP3 47.74868867922204 0.1498366402366518 2 {[DA]|[EG]}RQK{I|L}G{I|L} 8 0 + 51.072 0.0 0.0 5.6777 5.6777 87.022 0.0 0.0 0.0 10.567657157894104 14.024174299985006 10.567657157894104 9.262137858390815 0 1.0941876774005248 1.154901959985743 0.4247425010840047 0.0 + + {[DA]|[EG]}RQK{I|L}G{I|L};{[DA]|[EG]}R[AG]K{I|L}G{I|L};{[VA]|[{I|L}G]}{[WN]|[YH]}K{I|L}G{I|L};{[VA]|[{I|L}G]}{[TV]|[{I|L}S]}A[RN]G{I|L};[W{I|L}][NG]K{I|L}G{I|L};{[SA]|[TG]}[{I|L}V]A[RN]G{I|L};{[VA]|[{I|L}G]}[KA]N{[RE]|[WV]}{I|L};{[VA]|[{I|L}G]}[KA]N{I|L}{[RE]|[WV]} 5.6777;4.6481;4.5029;2.9863;2.6142;1.162;0.87987;0.54028 +;-;-;-;-;-;-;- + 230 1 1.876 85066.8 1.0 2049 3309 5355 DOHH2_400M_050219_2,5360 DOHH2_400M_050219_2,5360,DARQKIGL False True DARQKIGL 28.037537 450.766314685345 2852080.5 5355.0 ENSG00000100227|ENST00000252115|POLDIP3;;nc|ENSG00000100227|Q9BY77-2|POLDIP3 4.204314072926839 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5361 28.046 474.0 231350.0 25 0 11308.0 + 26127 NPSLKQQL 8 150 464.2662063406653 926.5178597481304 2 464.2660400271416 MULTI CID FTMS 0 0 0 5355 160348.734375 1.0 0 0.0 6 Unmodified _NPSLKQQL_ ENSG00000135390|ENST00000394349|ATP5MC2;ENSG00000154518|ENST00000284727|ATP5MC3;ENSG00000159199|ENST00000393366|ATP5MC1;ENST00000429083.1_1_2:198128082-198128199:+|nuORF;ENST00000442175.1_1_X:41958063-41958324:-|nuORF;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;ENST00000513781.5_1_17:46970480-46973128:+|nuORF;nc|ENSG00000135390|Q06055-2|ATP5MC2;nc|ENSG00000135390|Q06055-3|ATP5MC2 34.10243960390752 0.3329570729325616 2 NPS{I|L} 4 4 41.631 0.0 0.0 4.4933 0.0 0.0 0.0 512.2844332330686 512.2844332330686 24.156687756324686 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.0 0.0 + NPS{I|L} 4.4933 + + 238 + 1 1.876 88491.7 1.0 2050 3309 5355 DOHH2_400M_050219_2,5361 DOHH2_400M_050219_2,5361,NPSLKQQL False True NPSLKQQL 28.045923 464.266040027142 851685.6875 5355.0 nc|ENSG00000135390|Q06055-3|ATP5MC2;;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;;ENST00000442175.1_1_X:41958063-41958324:-|nuORF;;ENSG00000154518|ENST00000284727|ATP5MC3;;nc|ENSG00000135390|Q06055-2|ATP5MC2;;ENST00000429083.1_1_2:198128082-198128199:+|nuORF;;ENSG00000135390|ENST00000394349|ATP5MC2;;ENSG00000159199|ENST00000393366|ATP5MC1;;ENST00000513781.5_1_17:46970480-46973128:+|nuORF 4.045931895573934 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5362 28.05 227.0 714950.0 25 0 55518.0 + 17998 KRWESERVL 9 128 401.5597866581133 1201.6575305745398 3 401.5596496462822 MULTI CID FTMS 0 0 0 5355 153982.28125 0.1425531039592084 -2 0.0817508697509765 7 Unmodified _KRWESERVL_ ENSG00000185009|ENST00000355264|AP3M1;ENST00000480373.1_1_10:75888732-75889691:-|nuORF 51.487983226225225 0.0371074584807926 2 KRWESERV{I|L} 9 0 + 59.006 0.0 0.0 4.9104 4.9104 83.209 0.0 0.0 0.0 43.14239755696384 9.742143968049888 9.742143968049888 9.208187539523747 0 0.9489700043360187 0.0 1.579689690656103 0.0 + + KRWESERV{I|L};K[VG]WESERV{I|L};KR{[DA]|[EG]}ESERV{I|L};K{I|L}[QT]ESERV{I|L};K{I|L}E[QT]SERV{I|L};K{I|L}E[C(Carbamidomethyl (C))R]ERV{I|L};[RK]WNE[WR]K;[WR]TRNA[RD]K;[WR]{M(Oxidation (M))|F}{I|L}[QT][HS]K;[{I|L}V]{[RE]|[WV]}SEA[RD]K 4.9104;4.1441;4.1441;3.9774;3.5613;2.7269;1.1286;0.91492;0.88053;0.39314 +;-;-;-;-;-;-;-;-;- + 565 + 1 1.876 128211.2 1.0 2051 3309 5355 DOHH2_400M_050219_2,5362 DOHH2_400M_050219_2,5362,KRWESERVL True True KRWESERVL 28.050191 401.559649646282 5912185.5 5355.0 ENST00000480373.1_1_10:75888732-75889691:-|nuORF;;ENSG00000185009|ENST00000355264|AP3M1 5.090964794158936 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5363 28.064 800.0 260360.0 25 0 19903.0 8619 EVEEDEYKAFY 11 156 711.3077767223893 1420.6010005115786 2 711.3068725466728 MULTI CID FTMS 0 0 0 5355 115566.3203125 0.1614610339032512 -2 0.0817508697509765 8 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 26.268140514670165 0.4754186812857754 2 [AG]AHDEAGAQGGA{M(Oxidation (M))|F}Y 15 10 + 118.21 0.0 0.0 8.3211 8.3211 83.183 0.0 0.0 0.0 1.4209508549409122 15.18491783126585 1.4209508549409122 1.4209508549409122 0 1.0114393726401687 1.5228787452803376 1.5471062485323517 1.5189301784845295 [AG]AHDEAGAQGGA{M(Oxidation (M))|F}Y;[QA]HDEAGAQGGA{M(Oxidation (M))|F}Y;[AG]AHDEAQQGGA{M(Oxidation (M))|F}Y;[AG]AHDEAGAQNA{M(Oxidation (M))|F}Y;[AG]AHDEAGANAGA{M(Oxidation (M))|F}Y;[QA]HDEAGAQNA{M(Oxidation (M))|F}Y;[QA]HDEAGANAGA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[AG]AHDEAQQNA{M(Oxidation (M))|F}Y;[AG]AHDEAQNAGA{M(Oxidation (M))|F}Y 8.3211;8.2211;8.0621;7.9828;7.9113;7.8844;7.8113;7.7486;7.7254;7.6522 -;-;-;-;-;-;-;-;-;- 35765 1 1.876 147716.4 0.6499999761581421 2052 3309 5355 DOHH2_400M_050219_2,5363 DOHH2_400M_050219_2,5363,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5364 28.078 800.0 129030.0 25 0 7282.4 + 42376 VTDMSDAEQY 10 153 579.7344281091482 1157.4543032850963 2 579.7340576052666 MULTI CID FTMS 0 0 0 5355 92483.4609375 1.0 0 0.0 9 Unmodified _VTDMSDAEQY_ ENSG00000128708|ENST00000264108|HAT1;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1 29.081581746732265 0.3152867722954398 2 [AG]NC(Carbamidomethyl (C))[{M(Oxidation (M))|F}V]AEQY 10 6 [AG]NC(Carbamidomethyl (C))[{M(Oxidation (M))|F}V]AE + + 20.991 5.5139 0.64998 1.8136 1.8136 47.255 0.0 0.0 0.0 0.0 6.933772209161669 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 [AG]NC(Carbamidomethyl (C))[{M(Oxidation (M))|F}V]AEQY 1.8136 - 471 + 1 1.876 80924.1 0.5600000023841858 2053 3309 5355 DOHH2_400M_050219_2,5364 DOHH2_400M_050219_2,5364,VTDMSDAEQY False True VTDMSDAEQY 28.077854 579.734057605267 504649.40625 5355.0 ENST00000457761.6_1_2:172821936-172844354:+|nuORF;;nc|ENSG00000128708|O14929-2|HAT1;;ENSG00000128708|ENST00000264108|HAT1 5.992082913716634 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5365 28.08 26.0 2802700.0 25 0 252020.0 + 31456 RPRGPEGVGSL 11 78 375.54306484442304 1123.607365133469 3 375.8771850466728 MULTI CID FTMS 0 0 0 5355 580947.125 0.3975501734650113 -2 0.0817508697509765 10 Unmodified _RPRGPEGVGSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 23.015651743759182 0.551788120787869 2 VGS{I|L} 4 7 37.467 0.0 0.0 3.3345 0.0 0.0 749.3871937482437 0.0 749.3871937482437 0.0 11.091896990114233 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + VGS{I|L} 3.3345 + + 50 1 1.876 65704.2 1.0 2054 3309 5355 DOHH2_400M_050219_2,5365 DOHH2_400M_050219_2,5365,RPRGPEGVGSL False True RPRGPEGVGSL 28.080235 375.877185046673 24388452.0 5355.0 ENST00000523767.5_1_5:149877380-149900454:+|nuORF 8.80842367808024 3.0 True 11.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5366 28.084 221.0 412740.0 25 0 162400.0 -1 0 77 490.28227436893445 489.27499790233446 1 490.2823669314384 MULTI CID FTMS 0 0 0 5355 201707.640625 0.517635958297175 15 -0.8125228881835938 11 2 Y 1 -1 12.474 0.0 0.0 2.5495 0.0 0.0 308.2012501990126 0.0 308.2012501990126 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5495 - 7 + 1 1.876 76434.1 1.0 2055 3309 5355 DOHH2_400M_050219_2,5366 DOHH2_400M_050219_2,5366, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5368 28.089 69.0 811370.0 25 0 49790.0 + 36910 TESLSGCPEEK 11 94 590.26578682883 1178.5170207244598 2 590.2659789919853 MULTI CID FTMS 0 0 0 5367 499258.84375 0.2216020775187398 3 -0.3082218170166015 1 Unmodified _TESLSGCPEEK_ REV__ENSG00000188895|ENST00000398532|MSL1;REV__nc|ENSG00000188895|Q68DK7-2|MSL1;REV__nc|ENSG00000188895|Q68DK7-3|MSL1 31.26834338654808 0.3580123756476716 2 HVDAAEK 7 -1 51.98 0.0 0.0 4.4106 0.0 0.0 410.14244190053336 0.0 410.14244190053336 0.0 32.77133662659814 0.0 0.0 0 2.6237125054200234 0.0 0.3494850021680094 0.3054621874040891 HVDAAEK 4.4106 - 650 + 1 1.876 45416.4 1.0 2056 3310 5367 DOHH2_400M_050219_2,5368 DOHH2_400M_050219_2,5368,TESLSGCPEEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5369 28.093 214.0 267300.0 25 0 20950.0 + 23800 LVDQRVAEY 9 89 546.7878432719856 1091.561133610771 2 546.7875854372978 MULTI CID FTMS 0 0 0 5367 147962.8125 0.2841250077784967 2 -0.217477798461914 2 Unmodified _LVDQRVAEY_ ENSG00000143157|ENST00000367876|POGK 23.78978130925829 0.2284941198415988 2 {I|L}VD 3 6 50.005 0.0 0.0 4.5811 0.0 0.0 0.0 761.356025518944 761.356025518944 24.78855930516417 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}VD 4.5811 + + 74 + 1 1.876 48900.9 1.0 2057 3310 5367 DOHH2_400M_050219_2,5369 DOHH2_400M_050219_2,5369,LVDQRVAEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5370 28.096 115.0 842810.0 25 0 161260.0 569 AEILYYFAL 9 88 368.2001901064262 1101.5787409194786 3 368.1999999880791 MULTI CID FTMS 0 0 0 5367 276176.5625 0.0693651451755863 -2 0.1191272735595703 3 Unmodified _AEILYYFAL_ ENSG00000112893|ENST00000261483|MAN2A1 18.13498045792455 0.3457906370836843 2 AE{I|L}C{I|L} 5 5 66.013 0.0 0.0 5.9926 0.0 0.0 0.0 569.3166212747681 569.3166212747681 54.593438765655634 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 AE{I|L}C{I|L} 5.9926 - 53 + 1 1.876 81568.0 1.0 2058 3310 5367 DOHH2_400M_050219_2,5370 DOHH2_400M_050219_2,5370,AEILYYFAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5371 28.099 184.0 206400.0 25 0 23293.0 + 23962 LVSEYQQYQD 10 72 636.7906879610243 1271.5668229888486 2 636.7905761599541 MULTI CID FTMS 0 0 0 5367 257063.078125 1.0 0 0.0 4 Unmodified _LVSEYQQYQD_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000290377.9_1_9:141071128-141071713:+|nuORF;ENST00000402141.1_1_6:143757385-143757844:+|nuORF;ENST00000415481.1_1_1:809210-809726:+|nuORF;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000427668.1_1_1:53461605-53461695:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3 36.506200033944 0.1944608063770638 2 [YQ]QD 4 6 33.156 0.0 0.0 2.6075 0.0 0.0 0.0 734.3315073973048 734.3315073973048 6.200532407054567 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 1.086696871556164 + [YQ]QD 2.6075 + + 185 1 1.876 36959.6 1.0 2059 3310 5367 DOHH2_400M_050219_2,5371 DOHH2_400M_050219_2,5371,LVSEYQQYQD False True LVSEYQQYQD 28.099395 636.790576159954 1252578.875 5367.0 ENSG00000261456|ENST00000568584|TUBB8;;ENSG00000137267|ENST00000333628|TUBB2A;;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;;ENSG00000104833|ENST00000264071|TUBB4A;;ENSG00000196230|ENST00000327892|TUBB;;ENST00000427668.1_1_1:53461605-53461695:+|nuORF;;nc|ENSG00000258947|Q13509-2|TUBB3;;ENST00000415481.1_1_1:809210-809726:+|nuORF;;ENSG00000176014|ENST00000317702|TUBB6;;ENSG00000258947|ENST00000315491|TUBB3;;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;;ENSG00000137285|ENST00000259818|TUBB2B;;ENSG00000188229|ENST00000340384|TUBB4B;;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;;ENST00000402141.1_1_6:143757385-143757844:+|nuORF;;ENSG00000173213|ENST00000308911|TUBB8B;;ENST00000290377.9_1_9:141071128-141071713:+|nuORF 7.525798638661702 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5372 28.104 271.0 282390.0 25 0 32789.0 + 25547 NESEEVRQF 9 101 569.2621197116734 1136.5096864901468 2 569.2618286013603 MULTI CID FTMS 0 0 0 5367 182954.515625 0.3869995641867396 -1 0.0799560546875 5 Unmodified _NESEEVRQF_ ENSG00000126247|ENST00000246533|CAPNS1 82.5293158979368 0.0169039238599547 2 NESEEV 6 3 78.621 0.0 0.0 6.9177 0.0 0.0 0.0 446.21539115464026 446.21539115464026 64.3955559064576 0.0 0.0 0.0 0 0.7742275032520141 2.0 1.274227503252014 0.0 + NESEEV 6.9177 + + 402 + 1 1.876 64615.1 1.0 2060 3310 5367 DOHH2_400M_050219_2,5372 DOHH2_400M_050219_2,5372,NESEEVRQF True True NESEEVRQF 28.10441 569.26182860136 2656663.25 5367.0 ENSG00000126247|ENST00000246533|CAPNS1 6.733425776163737 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5373 28.109 249.0 245490.0 25 0 37374.0 + 25423 NEDPEGSRITY 11 80 640.7917734592355 1279.568993985271 2 640.7915527224541 MULTI CID FTMS 0 0 0 5367 171482.109375 1.0 0 0.0 6 Unmodified _NEDPEGSRITY_ ENSG00000124596|ENST00000424266|OARD1;ENST00000465893.1_1_6:41037763-41039373:-|nuORF 53.31671820480216 0.0992620867501809 2 {[QD]|[EN]|[WG]|[KD]|[RS]}DPEG 6 5 43.416 0.0 0.0 3.393 0.0 0.0 0.0 635.3202608697874 635.3202608697874 29.921525057367404 0.0 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.0 + {[QD]|[EN]|[WG]|[KD]|[RS]}DPEG 3.393 + + 55 + 1 1.876 51352.0 1.0 2061 3310 5367 DOHH2_400M_050219_2,5373 DOHH2_400M_050219_2,5373,NEDPEGSRITY True True NEDPEGSRITY 28.109062 640.791552722454 1036047.3125 5367.0 ENSG00000124596|ENST00000424266|OARD1;;ENST00000465893.1_1_6:41037763-41039373:-|nuORF 8.455654462178549 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5374 28.117 457.0 384750.0 25 0 39055.0 + -1 PNMMPTLVAY 10 127 584.77232745903 1167.5301019848598 2 584.7725097537041 MULTI CID FTMS 0 0 0 5367 170801.03125 0.206391037209146 -2 0.1191272735595703 7 2 Oxidation (M) _PNM(Oxidation (M))M(Oxidation (M))PTLVAY_ REV__ENSG00000262628|ENST00000575751|OR1D5;REV__nc|ENSG00000262628|P47884|OR1D4 13.042465956692816 0.6287021003332052 2 Y[EP]{I|L}[{M(Oxidation (M))|F}E]HAY 9 -1 + 53.874 0.0 0.0 4.6144 4.6144 84.759 0.0 0.0 0.0 39.34833115752497 6.935749724493121 6.935749724493121 15.634570281149266 0 1.0 0.0 0.5 0.0 Y[EP]{I|L}[{M(Oxidation (M))|F}E]HAY;[YE][YK][KT]CAY;[HA]V[Y{I|L}][QT]CAY;[YT][YR][KT]CAY;[HA]V[Y{I|L}][C(Carbamidomethyl (C))K]DY;[DP][Y{M(Oxidation (M))|F}]KKHAY 4.6144;3.2752;2.9814;2.1609;1.8428;1.7432 -;-;-;-;-;- 204 + 1 1.876 134032.4 1.0 2062 3310 5367 DOHH2_400M_050219_2,5374 DOHH2_400M_050219_2,5374,PNMMPTLVAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5375 28.131 800.0 193930.0 25 0 20161.0 34142 SLLVSNDDWY 10 150 606.2815258011535 1210.548498669107 2 606.2800170779228 MULTI CID FTMS 0 0 0 5367 157826.734375 0.2827574969047844 5 -0.3760414123535156 8 Unmodified _SLLVSNDDWY_ ENST00000229379.2_1_12:120878347-120878512:+|nuORF 5.731851221503515 0.7001233259664787 2 Y 1 9 12.474 0.0 0.0 1.0305 0.0 0.0 1029.4746441542616 0.0 1029.4746441542616 0.0 1.7609125905568137 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.0305 + + 175 + 1 1.876 112414.2 0.7200000286102295 2063 3310 5367 DOHH2_400M_050219_2,5375 DOHH2_400M_050219_2,5375,SLLVSNDDWY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5376 28.135 186.0 605540.0 25 0 75027.0 + 33078 SERDTRKLW 9 119 397.547301917888 1189.620076353864 3 397.5469848513603 MULTI CID FTMS 0 0 0 5367 155033.046875 0.5750525261100494 -1 0.0799560546875 9 Unmodified _SERDTRKLW_ ENSG00000164815|ENST00000297431|ORC5;nc|ENSG00000164815|O43913-2|ORC5 7.945399516374404 0.6373142958196798 2 WWDEG 5 8 27.536 0.0 0.0 2.3147 0.0 0.0 0.0 513.3147543494384 513.3147543494384 10.432802085199436 0.0 0.0 0.0 0 0.6822333069283655 0.0 0.0 0.0 WWDEG 2.3147 - 72 + 1 1.876 93972.4 1.0 2064 3310 5367 DOHH2_400M_050219_2,5376 DOHH2_400M_050219_2,5376,SERDTRKLW False True SERDTRKLW 28.134591 397.54698485136 1668686.0 5367.0 nc|ENSG00000164815|O43913-2|ORC5;;ENSG00000164815|ENST00000297431|ORC5 4.97067928314209 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5377 28.14 285.0 366590.0 25 0 28342.0 + + -1 ESDINSVRY 9 131 542.2396442506789 1082.4647355681575 2 542.2402221560478 MULTI CID FTMS 0 0 0 5367 132469.5625 1.0 0 0.0 10 Oxidation (M) _YSLDM(Oxidation (M))LYY_ ENST00000559541.1_1_15:52416976-52428016:-|nuORF;nc|ENSG00000069966|O14775-2|GNB5;ENSG00000069966|ENST00000261837|GNB5;nc|ENSG00000069966|O14775-3|GNB5 32.116972079565 0.368454113111938 2 YSA{I|L}DNHTY 9 -1 + 72.295 0.0 0.0 6.6788 6.6788 89.046 0.0 0.0 0.0 20.37401551688937 12.99349368937584 12.99349368937584 9.208187539523742 0 0.4247425010840047 2.0 1.1549471895720984 0.0 YSA{I|L}DNHTY;YSA{I|L}DGGHTY;YSAQ[DV]HTY;YSA[HT]{[DA]|[EG]}RY;YS[DP]WPRY;YSA{I|L}D[WP][MT];YS[DP]P{[DA]|[EG]}RY;YSA[YG][MT]KY;YS[W{I|L}]NHTY;YSA[AG][DV]HTY 6.6788;5.8281;5.6654;5.4198;5.1637;5.1412;5.0681;5.0222;4.9933;4.8148 -;-;-;-;-;-;-;-;-;- 924 + 1 1.876 86270.9 1.0 2065 3310 5367 DOHH2_400M_050219_2,5377 DOHH2_400M_050219_2,5377,YSLDMLYY False False ESDINSVRY 28.139833 542.240222156048 12935080.0 5367.0 ENST00000559541.1_1_15:52416976-52428016:-|nuORF;;nc|ENSG00000069966|O14775-2|GNB5;;ENSG00000069966|ENST00000261837|GNB5;;nc|ENSG00000069966|O14775-3|GNB5 8.04456869761149 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5378 28.144 203.0 345320.0 25 0 15281.0 + 8207 EPSQMLKHAV 10 107 380.5338078468174 1138.5795941406525 3 380.5340759158134 MULTI CID FTMS 0 0 0 5367 122583.8984375 1.0 0 0.0 11 Unmodified _EPSQMLKHAV_ ENSG00000168036|ENST00000349496|CTNNB1 8.97624648632007 0.6851160995914376 2 Y 1 10 13.495 0.0 0.0 1.1852 0.0 0.0 957.5055107439712 0.0 957.5055107439712 0.0 1.901056208558032 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1852 - 87 + 1 1.876 63253.7 1.0 2066 3310 5367 DOHH2_400M_050219_2,5378 DOHH2_400M_050219_2,5378,EPSQMLKHAV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5379 28.152 374.0 296370.0 25 0 44770.0 + + 15801 ISNVKTAL 8 121 423.2590201372093 0 423.2586547732353 PEAK CID FTMS 0 0 0 5367 115012.15625 1.0 0 0.0 12 Unmodified _ISFAVPVL_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5 28.17323086031832 0.2634958848191769 2 ND 2 -1 13.633 0.0 0.0 1.6143 0.0 0.0 530.3431002335999 82.06684290103749 612.4099431346374 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.2887254899964357 0.0 ND 1.6143 - 177 + 1 1.876 92805.0 1.0 2067 3310 5367 DOHH2_400M_050219_2,5379 DOHH2_400M_050219_2,5379,ISFAVPVL False False ISNVKTAL 28.151593 423.258654773235 445627.0 5367.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 1.8155614733695984 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5380 28.165 800.0 89426.0 25 0 7898.8 + + -1 STDTSGYGQSSYSSY 15 103 795.3157768860534 1588.6170008389067 2 795.3172485232353 MULTI CID FTMS 0 0 0 5367 111778.9609375 0.6694289833501161 -1 0.0799560546875 13 2 Carbamidomethyl (C) _SYC(Carbamidomethyl (C))YNYYC(Carbamidomethyl (C))LHF_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 3.2813086475875832 0.8596665074481906 2 SQG[NS]HSSY 9 -1 37.005 0.0 0.0 2.3294 0.0 0.0 623.244943809413 0.0 623.244943809413 0.0 13.278324880759492 0.0 0.0 0 0.0 0.0 1.1421590589602533 0.0 SQG[NS]HSSY 2.3294 - 3708 + 1 1.876 51946.9 0.4799999892711639 2068 3310 5367 DOHH2_400M_050219_2,5380 DOHH2_400M_050219_2,5380,SYCYNYYCLHF False False STDTSGYGQSSYSSY 28.165441 795.317248523235 1065463.75 5367.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 6.669819672902425 2.0 False 15.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5381 28.179 800.0 179730.0 25 0 9353.1 + -1 GVVTDMFTAI 10 177 535.26735980417 1068.52016667514 2 535.2672607302666 MULTI CID FTMS 0 0 0 5367 106280.125 0.005262809637843 11 -0.5439434051513672 14 Oxidation (M) _GVVTDM(Oxidation (M))FTAI_ REV__ENSG00000164659|ENST00000450689|ELAPOR2 32.30548876998284 0.2428506522065767 2 QDTRGTA{I|L} 8 -1 52.349 0.0 0.0 4.8992 0.0 0.0 208.0848866193375 0.0 208.0848866193375 0.0 39.87510972025312 0.0 0.0 0 2.397940008672037 0.0 0.8807196863200843 0.0 QDTRGTA{I|L} 4.8992 - 1098 1 1.876 113830.4 0.5 2069 3310 5367 DOHH2_400M_050219_2,5381 DOHH2_400M_050219_2,5381,GVVTDMFTAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5382 28.181 93.0 723590.0 25 0 152790.0 18807 LARAVVQA 8 74 414.25840645872 826.50225998424 2 415.2533752322197 MULTI CID FTMS 0 0 0 5367 532187.5 0.0511991680949921 11 -0.5439434051513672 15 Unmodified _LARAVVQA_ ENSG00000186281|ENST00000434632|GPAT2;ENST00000471757.5_1_2:96691131-96693504:-|nuORF;ENST00000482704.1_1_2:96692637-96693504:-|nuORF;ENST00000484440.5_1_2:96688852-96698107:-|nuORF;ENST00000486463.5_1_2:96687909-96693504:-|nuORF;nc|ENSG00000186281|Q6NUI2-3|GPAT2;nc|ENSG00000186281|Q6NUI2-5|GPAT2;nc|ENSG00000186281|Q6NUI2|GPAT2 5.760428011301431 0.7893668129297577 2 {I|L} 1 7 9.9148 0.0 0.0 1.1996 0.0 0.0 695.4074398932229 0.0 695.4074398932229 0.0 8.321039490384035 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1996 + + 10 + 1 1.876 60822.5 1.0 2070 3310 5367 DOHH2_400M_050219_2,5382 DOHH2_400M_050219_2,5382,LARAVVQA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5383 28.185 114.0 1773900.0 25 0 89539.0 + 6780 EEAEIIRKY 9 122 575.8088416012015 1149.603130269203 2 575.8101684451103 MULTI CID FTMS 0 0 0 5367 114972.59375 0.0397075116631924 -2 0.1191272735595703 16 Unmodified _EEAEIIRKY_ ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;ENST00000490921.5_1_1:226549163-226553858:-|nuORF 185.0500456816665 1.3391830030657819e-11 2 EEAE{I|L}{I|L}RKY 9 0 + 126.58 0.0 0.0 11.011 11.011 99.731 0.0 0.0 0.0 84.9784413119793 12.587418566968154 12.587418566968154 67.83002562481634 0 2.4105162882498865 2.0 0.805462187404089 1.360924374808178 + + EEAE{I|L}{I|L}RKY;{[CP]|[EA]}EE{I|L}{I|L}RKY;[QA]WW{I|L}RKY;[RK]{I|L}{I|L}EAEEY;[QA]WW{I|L}[VG]KY;{[CP]|[EA]}{I|L}EE{I|L}RKY;[DP]A[C(Carbamidomethyl (C))K]{I|L}RKY;[RK]{I|L}{I|L}EA[YE]E;[RK]{I|L}{I|L}EY{[CP]|[EA]}E;[PG]E[C(Carbamidomethyl (C))K]{I|L}RKY 11.011;5.1106;3.4968;3.235;2.6912;2.4133;2.2191;2.1848;2.1848;1.3765 +;-;-;-;-;-;-;-;-;- + 490 + 1 1.876 154730.1 1.0 2071 3310 5367 DOHH2_400M_050219_2,5383 DOHH2_400M_050219_2,5383,EEAEIIRKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5385 28.19 48.0 1283000.0 25 0 171940.0 2011 APAVLHFPL 9 54 482.78244272485216 963.5503325165045 2 482.7819396853447 MULTI CID FTMS 0 0 0 5384 1277925.75 1.0 0 0.0 1 Unmodified _APAVLHFPL_ ENSG00000243708|ENST00000458483|PLA2G4B;nc|ENSG00000243708|P0C869-4|PLA2G4B;nc|ENSG00000243708|P0C869-6|PLA2G4B 20.871210003555333 0.2717241269066626 2 APAPV 5 5 73.443 0.0 0.0 7.6222 0.0 0.0 0.0 525.2794463456494 525.2794463456494 50.51152522447381 0.0 0.0 0.0 0 1.8494850021680087 1.6989700043360187 0.0 0.0 APAPV 7.6222 - 50 + 1 1.873 53428.7 1.0 2072 3311 5384 DOHH2_400M_050219_2,5385 DOHH2_400M_050219_2,5385,APAVLHFPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5386 28.193 174.0 293720.0 25 0 21457.0 + 33109 SESNFARAY 9 87 522.7412331060301 1043.46791327886 2 522.7405273318291 MULTI CID FTMS 0 0 0 5384 209397.6875 0.3084415162962378 1 -0.1171703338623046 2 Unmodified _SESNFARAY_ ENSG00000062485|ENST00000351328|CS;ENST00000546621.5_1_12:56668606-56679804:-|nuORF;ENST00000547449.1_1_12:56676173-56676733:-|nuORF;ENST00000547912.1_1_12:56676173-56676410:-|nuORF 43.85829265575387 0.0542763391141878 2 {[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}ARAY 9 0 + 45.288 0.0 0.0 4.3402 4.3402 80.89 0.0 0.0 0.0 31.793512686778698 11.215686636715034 11.215686636715034 9.208187539523747 0 0.9247425010840048 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}ARAY;{[ES]|[DT]|[{I|L}C]}SGG{M(Oxidation (M))|F}ARAY;{[ES]|[DT]|[{I|L}C]}SN{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VS];{[ES]|[DT]|[{I|L}C]}SGG{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VS] 4.3402;3.4577;2.1887;1.3063 +;-;-;- + 83 + 1 1.873 44474.5 1.0 2073 3311 5384 DOHH2_400M_050219_2,5386 DOHH2_400M_050219_2,5386,SESNFARAY True True SESNFARAY 28.193168 522.740527331829 3600002.0 5384.0 ENSG00000062485|ENST00000351328|CS;;ENST00000547912.1_1_12:56676173-56676410:-|nuORF;;ENST00000547449.1_1_12:56676173-56676733:-|nuORF;;ENST00000546621.5_1_12:56668606-56679804:-|nuORF 6.2446521917978925 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5387 28.194 16.0 5219100.0 25 0 445620.0 + 6782 EEAEIIRKY 9 95 384.2081960333253 1149.602758700176 3 384.2079955935478 MULTI CID FTMS 0 0 0 5384 3192213.5 0.6616267634168913 -1 0.1003074645996093 3 Unmodified _EEAEIIRKY_ ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;ENST00000490921.5_1_1:226549163-226553858:-|nuORF 29.081581746732265 0.1611639662936252 2 [RK]{I|L}{I|L}EAEYE 9 8 + 38.694 0.0 0.0 3.3659 3.3659 78.475 0.0 0.0 0.0 0.0296090698503164 -5.15485646555198 -5.15485646555198 9.235162698957286 0 0.0 0.0 0.7302046884880937 0.0 [RK]{I|L}{I|L}EAEYE;[RK]{I|L}{I|L}EY{[CP]|[EA]}E;[RK]{I|L}{I|L}E{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}E;[PG][KT]KKAEYE 3.3659;2.5625;2.1475;1.8221 -;-;-;- 155 1 1.873 73466.8 1.0 2074 3311 5384 DOHH2_400M_050219_2,5387 DOHH2_400M_050219_2,5387,EEAEIIRKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5388 28.196 52.0 1826800.0 25 0 480170.0 + 823 AETDERRLL 9 75 551.7963446536872 1101.5781363741744 2 551.7961303591728 MULTI CID FTMS 0 0 0 5384 1229071.125 0.6191686466910273 -1 0.1003074645996093 4 Unmodified _AETDERRLL_ ENST00000337288.9_2_2:96874284-96874539:-|nuORF 37.97399986684836 0.0865783450051559 2 {[CP]|[EA]}TDERR{I|L}{I|L} 9 0 + 24.319 0.0 0.0 2.2077 2.2077 79.882 0.0 0.0 0.0 8.121374995494296 10.09881272697172 8.121374995494296 24.31926257837824 0 0.7742275032520141 0.0 0.0 0.8494850021680094 + + {[CP]|[EA]}TDERR{I|L}{I|L} 2.2077 + + 49 + 1 1.873 79333.0 1.0 2075 3311 5384 DOHH2_400M_050219_2,5388 DOHH2_400M_050219_2,5388,AETDERRLL True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5389 28.197 56.0 919140.0 25 0 111670.0 + 8368 ESDINSVRY 9 72 541.7591052135733 1081.5036574939463 2 541.7589599490166 MULTI CID FTMS 0 0 0 5384 711802.3125 0.5517631383422587 -1 0.1003074645996093 5 Unmodified _ESDINSVRY_ ENSG00000069966|ENST00000261837|GNB5;ENST00000559541.1_1_15:52416976-52428016:-|nuORF;nc|ENSG00000069966|O14775-2|GNB5;nc|ENSG00000069966|O14775-3|GNB5 51.629811660486645 0.0367964933207742 2 {[ES]|[DT]|[{I|L}C]}D{I|L}NSVHD 9 2 59.464 0.0 0.0 5.4983 0.0 0.0 0.0 82.0669191949828 82.0669191949828 46.98999233742198 0.0 0.0 0.0 0 0.6421590589602533 0.0 0.5941876774005249 0.4247425010840047 {[ES]|[DT]|[{I|L}C]}D{I|L}NSVHD 5.4983 - 235 + 1 1.873 45452.4 1.0 2076 3311 5384 DOHH2_400M_050219_2,5389 DOHH2_400M_050219_2,5389,ESDINSVRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5390 28.2 112.0 784840.0 25 0 90752.0 + 11111 GEFSSGRKW 9 88 527.2590675445329 1052.5035821558656 2 527.2593871951103 MULTI CID FTMS 0 0 0 5384 534957.375 1.0 0 0.0 6 Unmodified _GEFSSGRKW_ ENSG00000149262|ENST00000534064|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;ENST00000587624.5_1_7:64601607-64646883:+|nuORF;nc|ENSG00000149262|Q96HW7-2|INTS4;nc|ENSG00000149262|Q96HW7-3|INTS4 36.506200033944 0.094635877243972 2 W{M(Oxidation (M))|F}SS{[NV]|[RG]}KW 8 2 + 50.253 0.0 0.0 4.7746 4.7746 84.26 0.0 0.0 0.0 19.8199450473059 6.325095025625807 6.325095025625807 11.308422131034844 0 1.305462187404089 0.0 0.4247425010840047 0.0 W{M(Oxidation (M))|F}SS{[NV]|[RG]}KW;{[CT]|[{M(Oxidation (M))|F}G]}K{[NV]|[RG]}SSEEG;W{M(Oxidation (M))|F}[QT]{[SA]|[TG]}KW;W{[SA]|[TG]}Y{[NV]|[RG]}KW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{I|L}P]EEG;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KQ][QT]EEG;[VP][YR]{M(Oxidation (M))|F}GEEG;W{M(Oxidation (M))|F}[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[ES]|[DT]|[{I|L}C]};W{M(Oxidation (M))|F}[QT][KQ]{[ES]|[DT]|[{I|L}C]};W{M(Oxidation (M))|F}[{I|L}P][YK]{[CP]|[EA]} 4.7746;3.7002;2.7622;2.5895;2.359;2.2201;1.854;1.7472;1.6084;1.2939 -;-;-;-;-;-;-;-;-;- 144 + 1 1.873 70846.0 1.0 2077 3311 5384 DOHH2_400M_050219_2,5390 DOHH2_400M_050219_2,5390,GEFSSGRKW True True GEFSSGRKW 28.199509 527.25938719511 3166770.25 5384.0 nc|ENSG00000149262|Q96HW7-2|INTS4;;ENSG00000149262|ENST00000534064|INTS4;;nc|ENSG00000149262|Q96HW7-3|INTS4;;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;;ENST00000587624.5_1_7:64601607-64646883:+|nuORF 6.902416547139485 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5391 28.211 643.0 305340.0 25 0 18086.0 + 10442 FTENDKEYQEY 11 168 733.3093087049924 1464.6040644767847 2 733.3088867068291 MULTI CID FTMS 0 0 0 5384 400234.0625 1.0 0 0.0 7 Unmodified _FTENDKEYQEY_ ENSG00000169612|ENST00000304191|RAMAC;ENSG00000235272|ENST00000444122|RAMACL 153.66428140750168 0.0003990743956927 2 [YE]QADKEYQYE 11 6 + 93.635 0.0 0.0 6.3932 6.3932 79.795 0.0 0.0 0.0 3.183760163070744 3.0102999566398125 3.0102999566398125 2.068726390450223 0 1.3609243748081783 0.0 2.080780892006716 0.9947026752325154 [YE]QADKEYQYE;[YE]QADKE[HS]ETE;[YE]QADKEYQEY;{M(Oxidation (M))|F}TENQEKM{M(Oxidation (M))|F}EY;[YE]QWKE[HS]ETE;[YE]QWWAYQYE;[{M(Oxidation (M))|F}T]ENDKEYQYE;{[QD]|[EN]|[WG]|[KD]|[RS]}DKETEQNETE;[YQ]EADKEYQYE;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YADKEYQYE 6.3932;6.252;6.1877;6.1758;6.1419;6.0413;6.0083;5.9954;5.9821;5.9124 -;-;-;-;-;-;-;-;-;- 127392 1 1.873 133924.3 1.0 2078 3311 5384 DOHH2_400M_050219_2,5391 DOHH2_400M_050219_2,5391,FTENDKEYQEY True True FTENDKEYQEY 28.210728 733.308886706829 2459209.25 5384.0 ENSG00000235272|ENST00000444122|RAMACL;;ENSG00000169612|ENST00000304191|RAMAC 9.602611223856607 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5392 28.214 180.0 346320.0 25 0 29148.0 + 7141 EENFPENKEY 10 89 649.7804967672452 1297.5464406012902 2 649.7802612185478 MULTI CID FTMS 0 0 0 5384 395169.0625 1.0 0 0.0 8 Unmodified _EENFPENKEY_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 61.08992128646608 0.0337271188422265 2 EEN{M(Oxidation (M))|F}{M(Oxidation (M))|F}YPEN 9 5 64.949 0.0 0.0 5.0055 0.0 0.0 0.0 125.07224451236564 125.07224451236564 50.344698741100856 0.0 0.0 0.0 0 1.1307196863200843 1.5228787452803376 0.6694451763165201 1.0114393726401687 EEN{M(Oxidation (M))|F}{M(Oxidation (M))|F}YPEN 5.0055 - 992 + 1 1.873 53753.4 1.0 2079 3311 5384 DOHH2_400M_050219_2,5392 DOHH2_400M_050219_2,5392,EENFPENKEY True True EENFPENKEY 28.214232 649.780261218548 23357560.0 5384.0 ENST00000465029.5_1_2:111419157-111435602:-|nuORF;;nc|ENSG00000169679|O43683-2|BUB1;;ENSG00000169679|ENST00000302759|BUB1;;nc|ENSG00000169679|O43683-3|BUB1 8.838402907053629 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5393 28.217 116.0 763220.0 25 0 142930.0 + 6624 EARVRPVL 8 83 470.2899157514024 938.5652785696049 2 470.2899963259697 MULTI CID FTMS 0 0 0 5384 389624.5 1.0 0 0.0 9 Unmodified _EARVRPVL_ ENST00000546954.1_1_12:120882729-120884155:-|nuORF 23.1484247019978 0.5573009939494978 2 {I|L} 1 7 17.787 0.0 0.0 1.8951 0.0 0.0 807.4704279610096 0.0 807.4704279610096 0.0 5.791812460476251 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {I|L} 1.8951 + + 29 + 1 1.873 77432.8 1.0 2080 3311 5384 DOHH2_400M_050219_2,5393 DOHH2_400M_050219_2,5393,EARVRPVL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5394 28.223 345.0 222250.0 25 0 27448.0 + 4425 DAVVKHVL 8 109 440.7662148446655 879.5178767561309 2 440.7658569216728 MULTI CID FTMS 0 0 0 5384 253133.15625 0.9357289301428084 1 -0.1171703338623046 10 Unmodified _DAVVKHVL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 44.40701690623563 0.1655546087385432 2 {[DA]|[EG]}VVKHV{I|L} 8 0 + 65.074 0.0 0.0 7.3989 7.3989 96.638 0.0 0.0 0.0 36.48062535455438 13.399480616943508 13.399480616943508 43.61622732537714 0 1.1989700043360187 2.0 0.0 0.0 + + {[DA]|[EG]}VVKHV{I|L};{[DA]|[EG]}[RP][{I|L}P]V{I|L} 7.3989;2.4398 +;- + 166 + 1 1.873 64878.4 1.0 2081 3311 5384 DOHH2_400M_050219_2,5394 DOHH2_400M_050219_2,5394,DAVVKHVL False True DAVVKHVL 28.222882 440.765856921673 1576452.625 5384.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 4.037188212076823 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5395 28.228 292.0 386770.0 25 0 31445.0 + 675 AEMNRGSNEW 10 116 597.2537162256918 1192.4928795181836 2 597.2543823122978 MULTI CID FTMS 0 0 0 5384 200581.8125 0.2286493489357536 -1 0.1003074645996093 11 Unmodified _AEMNRGSNEW_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENST00000568339.5_1_16:85839106-85839475:+|nuORF 53.40400417844725 0.0601721406801337 2 EAEW 4 7 38.686 0.0 0.0 3.2441 0.0 0.0 659.2850208966812 0.0 659.2850208966812 0.0 17.81357210935475 0.0 0.0 0 0.3494850021680094 0.0 0.3252574989159953 0.0 EAEW 3.2441 - 312 1 1.873 89717.1 1.0 2082 3311 5384 DOHH2_400M_050219_2,5395 DOHH2_400M_050219_2,5395,AEMNRGSNEW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5396 28.231 129.0 421810.0 25 0 25234.0 + 6218 DTMKKFKSL 9 101 549.304872632859 1096.595192332518 2 549.3057739138603 MULTI CID FTMS 0 0 0 5384 153168.015625 0.9118834062154564 -1 0.1003074645996093 12 Unmodified _DTMKKFKSL_ ENSG00000133398|ENST00000255764|MED10;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 40.72490554402381 0.0714771638475563 2 {I|L}CMKK{M(Oxidation (M))|F}KS{I|L} 9 2 + 70.442 0.0 0.0 6.4237 6.4237 94.18 0.0 0.0 0.0 57.96774379777631 9.210777352520516 9.210777352520516 56.395840698003 0 1.360924374808178 0.0 1.0 0.0 {I|L}CMKK{M(Oxidation (M))|F}KS{I|L};{I|L}[WR]PWR[PS];{[DS]|[MA]|[CV]|TT}[WR]PP{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{I|L}[WR]P[WK][DP];{[ET]|[MV]}[WK]PP{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[RE]|[WV]}PP{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 6.4237;1.2809;0.85095;0.80811;0.73702;0.64865 -;-;-;-;-;- 166 + 1 1.873 45369.2 1.0 2083 3311 5384 DOHH2_400M_050219_2,5396 DOHH2_400M_050219_2,5396,DTMKKFKSL True True DTMKKFKSL 28.230898 549.30577391386 991966.375 5384.0 ENSG00000133398|ENST00000255764|MED10;;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 4.684506098429362 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5397 28.245 800.0 111590.0 25 0 9812.3 + -1 SRPDSILGMQF 11 122 633.8106420587354 1265.6067311842708 2 633.8110229372978 MULTI CID FTMS 0 0 0 5384 135040.109375 0.0310192872035896 7 -0.3453559875488281 13 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 32.78568957990786 0.3235288296534633 2 [AG]K{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 11 -1 + 71.569 0.0 0.0 5.6549 5.6549 74.288 0.0 0.0 0.0 8.124792791635372 9.555238810733435 8.124792791635372 0.0706232134580346 0 1.0682503180159344 1.3010299956639813 0.6382104921644451 2.217900182820548 [AG]K{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 5.6549;5.6493;5.0129;5.0073;4.9336;4.9336;4.928;4.928;4.2888;4.2888 -;-;-;-;-;-;-;-;-;- 1252 1 1.873 72079.9 0.6899999976158142 2084 3311 5384 DOHH2_400M_050219_2,5397 DOHH2_400M_050219_2,5397,SRPDSILGMQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5398 28.249 220.0 585020.0 25 0 47543.0 6443 EAERSKATAVA 11 119 378.2040509432164 1131.5903234298494 3 378.2039672732353 MULTI CID FTMS 0 0 0 5384 122703.21875 0.4803502168180434 -1 0.1003074645996093 14 Unmodified _EAERSKATAVA_ ENSG00000101082|ENST00000262866|SLA2;nc|ENSG00000101082|Q9H6Q3-2|SLA2;nc|ENSG00000101082|Q9H6Q3-3|SLA2;nc|ENSG00000101082|Q9H6Q3-4|SLA2 15.248480904072842 0.7179608125786238 2 [HC]AE{I|L}{I|L}RKY 9 10 + 61.653 0.0 0.0 5.4484 5.4484 82.731 0.0 0.0 0.0 7.147642715192504 7.7815125038364386 7.147642715192504 7.7815125038364386 0 0.7742275032520141 0.0 0.5 1.110924374808178 [HC]AE{I|L}{I|L}RKY;[HC]AE{I|L}{I|L}RYK;[HC]AE{I|L}{I|L}[VG]KY;[HC]AE{I|L}{I|L}[VG]YK;[HC]AE{I|L}Y[R{I|L}]K;[HC]AEY{I|L}[R{I|L}]K;[RK]{I|L}{I|L}EDTEE;[RK]{I|L}{I|L}EA[C(Carbamidomethyl (C))N]E;[R{I|L}]K{I|L}EDTEE;[R{I|L}]K{I|L}EA[C(Carbamidomethyl (C))N]E 5.4484;4.7607;4.6346;3.947;2.7618;2.0702;1.927;1.7788;1.661;1.5127 -;-;-;-;-;-;-;-;-;- 208 + 1 1.873 103846.3 1.0 2085 3311 5384 DOHH2_400M_050219_2,5398 DOHH2_400M_050219_2,5398,EAERSKATAVA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5399 28.259 506.0 325320.0 25 0 14437.0 + -1 FPREPRPKL 9 181 380.5607958627062 1138.6605581883186 3 380.5606262087822 MULTI CID FTMS 0 0 0 5384 102710.859375 1.0 0 0.0 15 Oxidation (M) _FIM(Oxidation (M))LARLFL_ ENSG00000152518|ENST00000282388|ZFP36L2 17.11289562659939 0.3734572693229295 2 {I|L} 1 -1 16.571 0.0 0.0 1.4553 0.0 0.0 1007.5655092154656 0.0 1007.5655092154656 0.0 1.0868566414494651 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L} 1.4553 + + 128 + 1 1.873 132948.2 1.0 2086 3311 5384 DOHH2_400M_050219_2,5399 DOHH2_400M_050219_2,5399,FIMLARLFL False False FPREPRPKL 28.258974 380.560626208782 754378.5 5384.0 ENSG00000152518|ENST00000282388|ZFP36L2 3.2084155877431235 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5400 28.273 800.0 89177.0 25 0 4966.2 -1 QGSWFCPSGWF 11 108 679.7819703549312 1357.5493877766623 2 679.7823364138603 MULTI CID FTMS 0 0 0 5384 88607.703125 1.0 0 0.0 16 Carbamidomethyl (C) _QGSWFC(Carbamidomethyl (C))PSGWF_ ENST00000468828.5_1_1:161183488-161183676:+|nuORF 8.745405648335112 0.8338865417133445 2 HDEAQQNA{M(Oxidation (M))|F} 9 -1 72.551 0.0 0.0 5.3442 0.0 0.0 299.1108570783219 0.0 299.1108570783219 0.0 40.51202161775737 0.0 0.0 0 0.8807196863200843 0.0 0.7614393726401688 0.0 HDEAQQNA{M(Oxidation (M))|F} 5.3442 - 739 1 1.873 54507.4 0.5400000214576721 2087 3311 5384 DOHH2_400M_050219_2,5400 DOHH2_400M_050219_2,5400,QGSWFCPSGWF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5401 28.287 800.0 64396.0 25 0 2901.7 + 13099 REKEPIVGSTDY 12 105 697.352141041883 1392.689729150566 2 697.3518554568291 MULTI CID FTMS 0 0 0 5384 78040.15625 1.0 0 0.0 17 Unmodified _HEMFINAIKQY_ nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1 12.240655878213236 0.7805268987462184 2 E[{I|L}P]VGSTDY 9 8 49.503 0.0 0.0 3.5545 0.0 0.0 413.2382984845719 0.0 413.2382984845719 0.0 37.28499242097519 0.0 0.0 0 1.6866654986684733 0.0 0.4247425010840047 0.0 E[{I|L}P]VGSTDY 3.5545 - 258 1 1.873 42452.7 0.5199999809265137 2088 3311 5384 DOHH2_400M_050219_2,5401 DOHH2_400M_050219_2,5401,HEMFINAIKQY False False REKEPIVGSTDY 28.286642 697.351855456829 1068603.5 5384.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 7.208858807881673 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5402 28.293 277.0 425940.0 25 0 110420.0 + -1 NLPDRTMKHME 11 88 702.3236732618512 0 702.3220703005791 PEAK CID FTMS 0 0 0 5384 250508.125 0.5255131781791139 -1 0.1003074645996093 18 2 Oxidation (M) _NLPDRTM(Oxidation (M))KHM(Oxidation (M))E_ REV__ENSG00000115266|ENST00000590469|APC2;REV__nc|ENSG00000115266|O95996-2|APC2;REV__nc|ENSG00000115266|O95996-3|APC2 8.155526934196011 0.4672964927559179 2 DMN{I|L} 4 -1 20.807 0.0 0.0 1.4834 0.0 0.0 718.3454533578837 208.0729464166625 926.4183997745462 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7134679910804405 DMN{I|L} 1.4834 - 153 + 1 1.873 86095.0 1.0 2089 3311 5384 DOHH2_400M_050219_2,5402 DOHH2_400M_050219_2,5402,NLPDRTMKHME False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5403 28.298 249.0 351770.0 25 0 85590.0 + 37875 TLVTFAFAGG 10 89 492.2622920153524 0 492.2621642947197 PEAK CID FTMS 0 0 0 5384 190470.1875 1.0 0 0.0 19 Unmodified _TLVTFAFAGG_ REV__ENSG00000166341|ENST00000299441|DCHS1 10.823927491677226 0.3685635357628707 2 {I|L}T 2 -1 15.217 0.0 0.0 1.5487 0.0 0.0 200.1188700641048 565.2387638222401 765.357633886345 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}T 1.5487 - 39 + 1 1.873 70993.1 1.0 2090 3311 5384 DOHH2_400M_050219_2,5403 DOHH2_400M_050219_2,5403,TLVTFAFAGG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5404 28.302 242.0 315220.0 25 0 71554.0 + 33235 SFNHVITGP 9 89 486.2523151375994 0 486.2516662478447 PEAK CID FTMS 0 0 0 5384 140150.921875 0.3765704255449563 6 -0.3227748870849609 20 Unmodified _SFNHVITGP_ REV__ENSG00000108950|ENST00000592554|FAM20A 10.823927491677226 0.3028200641087142 2 V 1 -1 5.2423 0.0 0.0 0.54017 0.0 0.0 485.20874487172 383.1992891901001 868.40803406182 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 V 0.54017 + + 1 + 1 1.873 63936.8 1.0 2091 3311 5384 DOHH2_400M_050219_2,5404 DOHH2_400M_050219_2,5404,SFNHVITGP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5406 28.307 105.0 566840.0 25 0 174340.0 + 31455 RPRGPEGVGSL 11 61 562.8115127024572 1123.6084724717143 2 562.8118774294853 MULTI CID FTMS 0 0 0 5405 381889.40625 0.3104982511121618 1 -0.0907440185546875 1 Unmodified _RPRGPEGVGSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 11.631370582801994 0.793200706552726 2 RP 2 9 25.093 0.0 0.0 2.2333 0.0 0.0 0.0 867.4334810846311 867.4334810846311 12.619229975844686 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 + RP 2.2333 + + 27 + 1 1.873 56114.8 1.0 2092 3312 5405 DOHH2_400M_050219_2,5406 DOHH2_400M_050219_2,5406,RPRGPEGVGSL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5407 28.308 47.0 1024100.0 25 0 94356.0 + 32836 SEGNITKQL 9 91 495.2668136382204 988.5190743432408 2 495.2665283083916 MULTI CID FTMS 0 0 0 5405 1207654.875 0.6007260391414226 7 -0.2548103332519531 2 Unmodified _SEGNITKQL_ chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;nc|ENSG00000111913|Q9Y4F9|RIPOR2 74.92900055777586 0.0191935851694334 2 [KQ]EDTKQ{I|L} 8 5 [KQ]ED + + 26.969 7.6811 1.5355 2.7282 2.7282 48.471 0.0 0.0 0.0 0.0 17.658715643802765 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.6549471895720984 [KQ]EDTKQ{I|L} 2.7282 - 197 + 1 1.873 39726.2 1.0 2093 3312 5405 DOHH2_400M_050219_2,5407 DOHH2_400M_050219_2,5407,SEGNITKQL True True SEGNITKQL 28.307852 495.266528308392 7703516.5 5405.0 nc|ENSG00000111913|Q9Y4F9|RIPOR2;;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;;chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;;ENSG00000111913|ENST00000643898|RIPOR2 3.243078788121541 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5408 28.31 119.0 547840.0 25 0 26424.0 + -1 LEPMDINQMAF 11 83 662.7996280711216 1323.584703209043 2 662.7994262576103 MULTI CID FTMS 0 0 0 5405 532975.75 0.6363575172629531 -1 0.1171703338623046 3 Oxidation (M) _LEPM(Oxidation (M))DINQMAF_ REV__ENSG00000143971|ENST00000272342|ETAA1 16.149105407346934 0.6992268271266642 2 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F} 13 -1 + 111.06 0.0 0.0 8.3911 8.3911 87.934 0.0 0.0 0.0 12.48464810310682 16.642078980768076 12.48464810310682 5.365716455251544 0 0.8494850021680094 1.3010299956639813 0.3807196863200844 1.829689690656103 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GQ{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}QG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GQ{M(Oxidation (M))|F}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GQ{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GQ{M(Oxidation (M))|F}EA[AG]QNA{M(Oxidation (M))|F} 8.3911;7.9857;7.7057;7.7057;7.7057;7.6435;7.4479;7.2983;7.2983;7.2983 -;-;-;-;-;-;-;-;-;- 1393 1 1.873 52593.1 1.0 2094 3312 5405 DOHH2_400M_050219_2,5408 DOHH2_400M_050219_2,5408,LEPMDINQMAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5409 28.312 94.0 602780.0 25 0 58490.0 + 5741 DPMKARVVL 9 89 522.7971840125145 1043.579815091829 2 522.7970458865166 MULTI CID FTMS 0 0 0 5405 419771.34375 0.5475859909253407 -1 0.1171703338623046 4 Oxidation (M) _DPM(Oxidation (M))KARVVL_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 41.8396318013385 0.0653578398400075 2 DP{M(Oxidation (M))|F}KA[RV]V{I|L} 9 0 + 52.355 0.0 0.0 5.0168 5.0168 89.038 0.0 0.0 0.0 36.32435190428925 2.17857616147068 2.17857616147068 52.35451353269835 0 0.8945990182825423 1.6989700043360187 0.0 0.0 + + DP{M(Oxidation (M))|F}KA[RV]V{I|L} 5.0168 + + 50 + 1 1.873 51071.1 1.0 2095 3312 5405 DOHH2_400M_050219_2,5409 DOHH2_400M_050219_2,5409,DPMKARVVL True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5410 28.316 181.0 561390.0 25 0 53625.0 + 32960 SELPTAKEY 9 104 519.2608047386775 1036.507056544155 2 519.2617065310478 MULTI CID FTMS 0 0 0 5405 228982.671875 0.1924209580557794 2 -0.1215991973876953 5 Unmodified _SELPTAKEY_ ENSG00000187555|ENST00000344836|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;ENST00000569448.1_1_16:8993400-8995074:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7 26.268140514670165 0.1969607489560049 2 {[ES]|[DT]|[{I|L}C]}{I|L}P{[CP]|[EA]}[KT]Y 9 2 + 20.862 0.0 0.0 2.0128 2.0128 79.222 0.0 0.0 0.0 6.88302467346006 1.1831747353331714 1.1831747353331714 20.862424760180435 0 0.8252574989159953 0.0 0.4247425010840047 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}P{[CP]|[EA]}[KT]Y 2.0128 - 120 + 1 1.873 78665.0 1.0 2096 3312 5405 DOHH2_400M_050219_2,5410 DOHH2_400M_050219_2,5410,SELPTAKEY False True SELPTAKEY 28.315934 519.261706531048 16422922.0 5405.0 ENSG00000187555|ENST00000344836|USP7;;nc|ENSG00000187555|Q93009-3|USP7;;ENST00000565455.5_1_16:8987857-9023250:-|nuORF;;ENST00000569448.1_1_16:8993400-8995074:-|nuORF 5.487250804901123 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5411 28.319 134.0 399250.0 25 0 30218.0 6832 EECQRQLL 8 99 509.7533012280074 1017.4920495228148 2 509.7540466189384 MULTI CID FTMS 0 0 0 5405 211721.578125 1.0 0 0.0 6 Unmodified _EECQRQLL_ ENSG00000177666|ENST00000336615|PNPLA2;nc|ENSG00000177666|Q96AD5-2|PNPLA2 15.768221252438446 0.6779680726941459 2 {I|L} 1 7 13.495 0.0 0.0 1.3263 0.0 0.0 886.3970005499618 0.0 886.3970005499618 0.0 -2.95880017344075 -2.95880017344075 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3263 + + 125 + 1 1.873 46578.0 1.0 2097 3312 5405 DOHH2_400M_050219_2,5411 DOHH2_400M_050219_2,5411,EECQRQLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5412 28.333 800.0 151240.0 25 0 12412.0 -1 RWYEVMQFCWL 11 103 809.368882121655 1616.72321131011 2 809.8696777224541 MULTI CID FTMS 0 0 0 5405 195640.21875 1.0 0 0.0 7 Carbamidomethyl (C) _RWYEVMQFC(Carbamidomethyl (C))WL_ ENSG00000181409|ENST00000326724|AATK;nc|ENSG00000181409|Q6ZMQ8-3|AATK 1.1933415558491238 0.8695176722560516 2 {M(Oxidation (M))|F}ANQQA[C(Carbamidomethyl (C))R]WQ 10 -1 71.86 0.0 0.0 4.4448 0.0 0.0 309.13546440408305 0.0 309.13546440408305 0.0 64.87002527416834 0.0 0.0 0 1.3494850021680094 0.0 0.0 1.1989700043360187 {M(Oxidation (M))|F}ANQQA[C(Carbamidomethyl (C))R]WQ 4.4448 - 670 + 1 1.873 85082.0 0.8100000023841858 2098 3312 5405 DOHH2_400M_050219_2,5412 DOHH2_400M_050219_2,5412,RWYEVMQFCWL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5413 28.336 160.0 333660.0 25 0 32355.0 + 7235 EERVINEEY 9 85 590.7779068308795 1179.5412607285589 2 590.7773315310478 MULTI CID FTMS 0 0 0 5405 198237.015625 0.8811246270184617 -1 0.1171703338623046 8 Unmodified _EERVINEEY_ ENSG00000102054|ENST00000380087|RBBP7;ENSG00000162521|ENST00000373493|RBBP4;ENST00000401893.7_1_1:33116898-33134028:+|nuORF;ENST00000465780.1_1_1:33116898-33117663:+|nuORF;ENST00000524393.5_1_1:33116898-33134621:+|nuORF;ENST00000525506.1_1_1:33116898-33123241:+|nuORF;nc|ENSG00000102054|Q16576-2|RBBP7;nc|ENSG00000162521|Q09028-2|RBBP4;nc|ENSG00000162521|Q09028-3|RBBP4 57.72198328787511 0.0273433238377839 2 EERV{I|L}NEEY 9 0 + 80.106 0.0 0.0 6.7913 6.7913 89.958 0.0 0.0 0.0 27.990600108308755 61.90115365386252 27.990600108308755 9.208187539523747 0 0.5 1.0969100130080565 1.9517188504113845 0.3807196863200844 + + EERV{I|L}NEEY;EERV{I|L}GGEEY;[{M(Oxidation (M))|F}V][PA]V{I|L}NEEY;{[ET]|[MV]}[HK]{I|L}N{M(Oxidation (M))|F}EY;[{M(Oxidation (M))|F}V][PA]V{I|L}GGEEY;{[ET]|[MV]}[HK]{I|L}NE{M(Oxidation (M))|F}Y;{[ET]|[MV]}[HK]{I|L}GG{M(Oxidation (M))|F}EY;{[ET]|[MV]}[HK]{I|L}GGE{M(Oxidation (M))|F}Y;{[ET]|[MV]}[HK]E{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}Y 6.7913;6.0106;3.892;3.2323;2.7923;2.617;2.4517;1.8364;1.3497 +;-;-;-;-;-;-;-;- + 269 1 1.873 46599.7 1.0 2099 3312 5405 DOHH2_400M_050219_2,5413 DOHH2_400M_050219_2,5413,EERVINEEY True True EERVINEEY 28.335665 590.777331531048 1109022.125 5405.0 ENSG00000102054|ENST00000380087|RBBP7;;ENST00000401893.7_1_1:33116898-33134028:+|nuORF;;ENST00000524393.5_1_1:33116898-33134621:+|nuORF;;nc|ENSG00000162521|Q09028-3|RBBP4;;ENST00000465780.1_1_1:33116898-33117663:+|nuORF;;nc|ENSG00000162521|Q09028-2|RBBP4;;ENST00000525506.1_1_1:33116898-33123241:+|nuORF;;ENSG00000162521|ENST00000373493|RBBP4;;nc|ENSG00000102054|Q16576-2|RBBP7 7.300246715545654 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5414 28.35 800.0 259070.0 25 0 30158.0 + 26340 NSEEMKEAYY 10 163 632.2633784386719 1262.5122039441435 2 632.2628051638603 MULTI CID FTMS 0 0 0 5405 159348.578125 0.2663896225395884 -2 0.217477798461914 9 Unmodified _NSEEMKEAYY_ ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF;ENST00000581339.1_1_18:21053400-21057068:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3 143.21322497773306 0.00010449669748 2 [NS]EEM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AYY 10 0 + 107.67 0.0 0.0 8.5285 8.5285 91.439 0.0 0.0 0.0 19.426806100157563 58.43742522575521 19.426806100157563 9.018637558036673 0 2.548455006504028 1.3010299956639813 2.396591250700361 1.6039171939081172 + + [NS]EEM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AYY;[NS]EEM[{I|L}T]NYY;[NS]EEM[{I|L}T]GGYY;[NS]E[WR]MDYY;{[ES]|[DT]|[{I|L}C]}NEM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AYY;GGSEEM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AYY;{[QD]|[EN]|[WG]|[KD]|[RS]}SEM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AYY;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EEESNAYY;{[ES]|[DT]|[{I|L}C]}NEM[{I|L}T]NYY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MEESNAYY 8.5285;7.8142;7.0883;6.831;6.8207;6.2251;6.1215;6.1074;6.1063;5.9821 +;-;-;-;-;-;-;-;-;- + 22533 1 1.873 155443.8 0.7799999713897705 2100 3312 5405 DOHH2_400M_050219_2,5414 DOHH2_400M_050219_2,5414,NSEEMKEAYY True True NSEEMKEAYY 28.3495 632.26280516386 3400497.25 5405.0 nc|ENSG00000101782|O14730-2|RIOK3;;ENST00000581339.1_1_18:21053400-21057068:+|nuORF;;ENSG00000101782|ENST00000339486|RIOK3;;ENST00000581302.5_1_18:21033283-21057068:+|nuORF 7.740492979685466 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5415 28.357 404.0 243810.0 25 0 20642.0 + 7323 EEYEARENF 9 123 593.7556276445583 1185.4967023559166 2 594.2628661990166 MULTI CID FTMS 0 0 0 -1 0 10 Unmodified _EEYEARENF_ ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 24.020572477871973 0.2255576514309169 2 EEYE[KT]D{[WS]|[C(Carbamidomethyl (C)){I|L}]} 9 5 + 37.475 0.0 0.0 3.1611 3.1611 74.718 0.0 0.0 0.0 21.98999233742198 1.2224122066494658 1.2224122066494658 7.781512503836442 0 0.0 1.6989700043360187 0.3494850021680094 0.2887254899964357 EEYE[KT]D{[WS]|[C(Carbamidomethyl (C)){I|L}]};[AG]YD[KT]EY[HC];[AG]DY[KT]EY[HC];[YE]N[KT]EY[HC];{[QD]|[EN]|[WG]|[KD]|[RS]}Y[KT]EY[HC];[YE]GG[KT]EY[HC];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L}Q[DP];EEY[QA][YR]{NN|[MP]|[D{I|L}]|[EV]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L}[AG][DP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[HG]|PP}{[TV]|[{I|L}S]}QD{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.1611;2.5047;2.1706;1.9819;1.3938;1.2051;1.0716;0.83378;0.29487;0.0081284 -;-;-;-;-;-;-;-;-;- 461 + 1 1.873 76473.6 1.0 2101 3312 5405 DOHH2_400M_050219_2,5415 DOHH2_400M_050219_2,5415,EEYEARENF False True EEYEARENF 28.356723 594.262866199017 1067855.125 5405.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B 2.35215425491333 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5416 28.361 245.0 417120.0 25 0 76132.0 + + 6487 AELTGDHQL 9 110 492.2433459477967 982.4721389623934 2 492.2431213259697 MULTI CID FTMS 0 0 0 5405 143277.171875 0.388120934984126 -2 0.217477798461914 11 Unmodified _EAIELASHN_ ENSG00000144028|ENST00000323853|SNRNP200 47.74868867922204 0.0453060283459952 2 {[QN]|[E{I|L}]|[KN]}YYT{I|L} 6 -1 40.563 0.0 0.0 4.1287 0.0 0.0 0.0 197.05461061114468 197.05461061114468 18.445443658194232 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.805462187404089 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}YYT{I|L} 4.1287 - 339 1 1.873 82186.4 1.0 2102 3312 5405 DOHH2_400M_050219_2,5416 DOHH2_400M_050219_2,5416,EAIELASHN False False AELTGDHQL 28.361281 492.24312132597 3635995.75 5405.0 ENSG00000144028|ENST00000323853|SNRNP200 5.868717511494954 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5417 28.367 303.0 433020.0 25 0 111550.0 + 11112 GEFSSGRKW 9 136 351.8415910919308 0 351.8416625857353 PEAK CID FTMS 0 0 0 5405 149172.046875 0.5864223151031981 1 -0.0907440185546875 12 Unmodified _GEFSSGRKW_ ENSG00000149262|ENST00000534064|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;ENST00000587624.5_1_7:64601607-64646883:+|nuORF;nc|ENSG00000149262|Q96HW7-2|INTS4;nc|ENSG00000149262|Q96HW7-3|INTS4 13.042465956692816 0.2773713495150148 2 S 1 8 6.9897 0.0 0.0 0.99615 0.0 0.0 69.32908590765699 542.2854097955686 611.6144957032257 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + S 0.99615 + + 13 + 1 1.873 110478.4 1.0 2103 3312 5405 DOHH2_400M_050219_2,5417 DOHH2_400M_050219_2,5417,GEFSSGRKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5418 28.382 800.0 99904.0 25 0 19644.0 + + 34843 VSDVEMQEHY 10 99 618.2862668815908 617.2789904149907 1 618.2845947146416 MULTI CID FTMS 0 0 0 5405 81820.8359375 1.0 0 0.0 13 Unmodified _SQGAAGAG_ ENSG00000160201|ENST00000291552|U2AF1;nc|ENSG00000160201|Q01081-2|U2AF1 5.230669730166228 0.792582437072536 2 {I|L}Q 2 -1 21.013 0.0 0.0 3.4042 0.0 0.0 358.1255307976064 0.0 358.1255307976064 0.0 5.122796860033672 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {I|L}Q 3.4042 - 48 + 1 1.873 65522.8 0.6200000047683716 2104 3312 5405 DOHH2_400M_050219_2,5418 DOHH2_400M_050219_2,5418,SQGAAGAG False False VSDVEMQEHY 28.381819 618.284594714642 115955.984375 5405.0 ENSG00000160201|ENST00000291552|U2AF1;;nc|ENSG00000160201|Q01081-2|U2AF1 4.6413679122924805 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5419 28.384 126.0 369920.0 25 0 45473.0 -1 0 82 556.2637662383332 555.2564897717332 1 556.2637206912041 MULTI CID FTMS 0 0 0 5405 340304.46875 0.719211870485708 1 -0.0907440185546875 14 2 {M(Oxidation (M))|F} 1 -1 11.42 0.0 0.0 2.0567 0.0 0.0 390.177294680716 0.0 390.177294680716 0.0 0.5825278453571858 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.0567 - 48 + 1 1.873 37342.8 1.0 2105 3312 5405 DOHH2_400M_050219_2,5419 DOHH2_400M_050219_2,5419, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5420 28.387 131.0 731860.0 25 0 359460.0 -1 0 58 478.2459080497019 477.2386315831019 1 478.2462951540947 MULTI CID FTMS 0 0 0 5405 260569.625 0.4765659203300503 -2 0.217477798461914 15 2 {I|L} 1 -1 12.218 0.0 0.0 2.5602 0.0 0.0 346.1438420096628 0.0 346.1438420096628 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.5602 - 5 + 1 1.873 79266.0 1.0 2106 3312 5405 DOHH2_400M_050219_2,5420 DOHH2_400M_050219_2,5420, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5421 28.389 110.0 466080.0 25 0 36267.0 25330 NAKMKKLS 8 94 460.2743819448315 918.534210956463 2 460.2753478884697 MULTI CID FTMS 0 0 0 5405 247978.375 1.0 0 0.0 16 Unmodified _NAKMKKLS_ ENST00000506535.1_1_4:185619454-185631498:-|nuORF 7.910154910731844 0.7763180056447161 2 SY 2 8 14.949 0.0 0.0 1.6274 0.0 0.0 650.428694454313 0.0 650.428694454313 0.0 -0.2904561281719999 -0.2904561281719999 0.0 0 0.0 0.0 0.0 0.0 SY 1.6274 - 60 + 1 1.873 44477.1 1.0 2107 3312 5405 DOHH2_400M_050219_2,5421 DOHH2_400M_050219_2,5421,NAKMKKLS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5422 28.393 166.0 423840.0 25 0 30445.0 + 13261 HIKDSFHSL 9 122 361.85697091964977 0 361.8569518923759 PEAK CID FTMS 0 0 0 5405 186404.0 0.652444552755072 -2 0.217477798461914 17 Unmodified _HIKDSFHSL_ ENSG00000125952|ENST00000358664|MAX;ENST00000553951.1_1_14:65544523-65568380:-|nuORF;ENST00000556702.1_1_14:65560332-65569057:-|nuORF;ENST00000557277.5_2_14:65544132-65569310:-|nuORF;nc|ENSG00000125952|P61244-2|MAX;nc|ENSG00000125952|P61244-3|MAX;nc|ENSG00000125952|P61244-4|MAX;nc|ENSG00000125952|P61244-5|MAX;nc|ENSG00000125952|P61244-6|MAX 37.07464296494664 0.0760988090256072 2 {I|L} 1 8 6.9897 0.0 0.0 0.96851 0.0 0.0 499.5507205484808 106.04162775211172 605.5923483005924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.96851 + + 30 + 1 1.873 60200.4 1.0 2108 3312 5405 DOHH2_400M_050219_2,5422 DOHH2_400M_050219_2,5422,HIKDSFHSL True True HIKDSFHSL 28.392637 361.856951892376 1320496.875 5405.0 ENST00000553951.1_1_14:65544523-65568380:-|nuORF;;ENST00000556702.1_1_14:65560332-65569057:-|nuORF;;nc|ENSG00000125952|P61244-2|MAX;;ENSG00000125952|ENST00000358664|MAX;;nc|ENSG00000125952|P61244-3|MAX;;nc|ENSG00000125952|P61244-5|MAX;;ENST00000557277.5_2_14:65544132-65569310:-|nuORF;;nc|ENSG00000125952|P61244-6|MAX;;nc|ENSG00000125952|P61244-4|MAX 5.07063643137614 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5424 28.397 25.0 2234100.0 25 0 212820.0 + 570 AETDRLREI 9 70 368.2001901064262 1101.5787409194786 3 368.1999084353447 MULTI CID FTMS 0 0 0 5423 1466967.0 0.3684468298166841 1 -0.0308551788330078 1 Unmodified _AEILYYFAL_ ENSG00000142733|ENST00000357582|MAP3K6;ENST00000470890.1_1_1:27681884-27683265:-|nuORF;nc|ENSG00000142733|O95382-3|MAP3K6 23.1484247019978 0.2366544122328345 2 AE{I|L}C 4 6 59.993 0.0 0.0 5.4461 0.0 0.0 0.0 682.4006667733136 682.4006667733136 49.02372200412145 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 AE{I|L}C 5.4461 - 26 + 1 1.879 48498.6 1.0 2109 3313 5423 DOHH2_400M_050219_2,5424 DOHH2_400M_050219_2,5424,AEILYYFAL False False AETDRLREI 28.397391 368.199908435345 21445076.0 5423.0 ENSG00000142733|ENST00000357582|MAP3K6;;ENST00000470890.1_1_1:27681884-27683265:-|nuORF;;nc|ENSG00000142733|O95382-3|MAP3K6 1.668048510948817 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5425 28.4 143.0 435170.0 25 0 45130.0 23234 LSTDPQHHAY 10 64 584.77232745903 1167.5301019848598 2 584.7726928591728 MULTI CID FTMS 0 0 0 5423 346201.6875 0.4183401285329279 1 -0.0308551788330078 2 Unmodified _LSTDPQHHAY_ ENSG00000173546|ENST00000308508|CSPG4 12.240655878213236 0.6421556946785427 2 Y[EP]{I|L}[{M(Oxidation (M))|F}E]HAY 9 7 + 53.874 0.0 0.0 4.6144 4.6144 86.21 0.0 0.0 0.0 43.389399919613965 4.805906063131715 4.805906063131715 24.771212547196622 0 1.0 0.0 0.5 0.0 Y[EP]{I|L}[{M(Oxidation (M))|F}E]HAY;[HA][WQ]QQHAY 4.6144;2.4927 -;- 82 + 1 1.879 53915.9 1.0 2110 3313 5423 DOHH2_400M_050219_2,5425 DOHH2_400M_050219_2,5425,LSTDPQHHAY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5426 28.402 83.0 856490.0 25 0 96784.0 + 5745 DPNFKNRL 8 76 502.2691033494676 1002.5236537657352 2 502.2694579958916 MULTI CID FTMS 0 0 0 5423 459130.3125 0.7439649001705043 -3 0.3082218170166015 3 Unmodified _DPNFKNRL_ ENSG00000173726|ENST00000366607|TOMM20 36.04419817259434 0.3004715606373109 2 DPN{M(Oxidation (M))|F}K 5 3 61.727 0.0 0.0 6.1571 0.0 0.0 0.0 398.21628748111567 398.21628748111567 42.26280941356464 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.805462187404089 + DPN{M(Oxidation (M))|F}K 6.1571 + + 34 + 1 1.879 58111.3 1.0 2111 3313 5423 DOHH2_400M_050219_2,5426 DOHH2_400M_050219_2,5426,DPNFKNRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5427 28.405 158.0 379940.0 25 0 33711.0 + 5586 DMYNRMTSA 9 96 544.7282752442155 1087.441997555231 2 544.7286254763603 MULTI CID FTMS 0 0 0 5423 340441.5 0.632031177208344 -3 0.3082218170166015 4 Unmodified _DMYNRMTSA_ ENSG00000134809|ENST00000257245|TIMM10 29.84058131909904 0.1515068451768857 2 [MD]YN 4 5 36.95 0.0 0.0 3.3979 0.0 0.0 0.0 561.2485445611936 561.2485445611936 20.49681237692305 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [MD]YN 3.3979 + + 96 + 1 1.879 50408.2 1.0 2112 3313 5423 DOHH2_400M_050219_2,5427 DOHH2_400M_050219_2,5427,DMYNRMTSA False True DMYNRMTSA 28.405264 544.72862547636 2560156.0 5423.0 ENSG00000134809|ENST00000257245|TIMM10 7.163045406341553 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5428 28.407 98.0 473290.0 25 0 26593.0 + + 40370 DMQRKVEL 8 92 509.2739546830564 1016.5333564329128 2 509.7719604372978 MULTI CID FTMS 0 0 0 5423 231049.375 0.8125946354497127 -1 0.0907440185546875 5 Unmodified _VHYLPEFL_ ENSG00000198865|ENST00000361970|CCDC152 10.183394434864962 0.7604730176254005 2 NM 2 -1 17.959 0.0 0.0 1.7667 0.0 0.0 0.0 768.4392183893186 768.4392183893186 4.463950151760656 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NM 1.7667 - 176 + 1 1.879 39093.4 1.0 2113 3313 5423 DOHH2_400M_050219_2,5428 DOHH2_400M_050219_2,5428,VHYLPEFL False False DMQRKVEL 28.407373 509.771960437298 1377068.875 5423.0 ENSG00000198865|ENST00000361970|CCDC152 3.2304228941599527 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5429 28.418 626.0 254520.0 25 0 16069.0 40266 VGTLPSGK 8 187 379.7244083011742 757.4342636691484 2 379.7241088747978 MULTI CID FTMS 0 0 0 5423 113888.1875 0.6675604908932231 -1 0.0907440185546875 6 Unmodified _VGTLPSGK_ ENST00000280571.9_1_12:123920839-123921196:-|nuORF 19.438996006549623 0.6237395211498085 2 GE[KP]EK 6 5 27.797 0.0 0.0 3.6699 0.0 0.0 71.07428176093906 0.0 71.07428176093906 0.0 6.827665712010216 0.0 0.0 0 0.7302046884880937 0.0 0.3494850021680094 0.0 GE[KP]EK 3.6699 - 199 1 1.879 125779.0 1.0 2114 3313 5423 DOHH2_400M_050219_2,5429 DOHH2_400M_050219_2,5429,VGTLPSGK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5430 28.423 276.0 230180.0 25 0 22033.0 -1 EAANRVEIC 9 91 531.2549731700994 1060.4953934069988 2 530.7507202029228 MULTI CID FTMS 0 0 0 5423 103034.546875 1.0 0 0.0 7 Carbamidomethyl (C) _EAANRVEIC(Carbamidomethyl (C))_ ENSG00000006740|ENST00000379672|ARHGAP44;ENST00000578442.1_1_17:12693973-12832444:+|nuORF;nc|ENSG00000006740|Q17R89-2|ARHGAP44;nc|ENSG00000006740|Q17R89-3|ARHGAP44 10.073929032068715 0.563993802247229 2 {[CP]|[EA]}AEM 5 -1 24.961 0.0 0.0 2.3537 0.0 0.0 0.0 526.2848574863418 526.2848574863418 9.47621246364342 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[CP]|[EA]}AEM 2.3537 - 64 + 1 1.879 55913.6 1.0 2115 3313 5423 DOHH2_400M_050219_2,5430 DOHH2_400M_050219_2,5430,EAANRVEIC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5432 28.43 211.0 256700.0 25 0 18225.0 + 320 AEAEAVREVY 10 86 568.7823072492425 1135.550061565285 2 568.7830688357353 MULTI CID FTMS 0 0 0 5431 158870.296875 0.4366914387304375 -3 0.23876953125 1 Unmodified _AEAEAVREVY_ ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 24.881564428377168 0.4096545554397951 2 {[CP]|[EA]}AEAP 6 5 38.416 0.0 0.0 3.3831 0.0 0.0 0.0 564.258277377998 564.258277377998 22.931825014007217 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {[CP]|[EA]}AEAP 3.3831 - 86 + 1 1.879 46348.9 1.0 2116 3314 5431 DOHH2_400M_050219_2,5432 DOHH2_400M_050219_2,5432,AEAEAVREVY False True AEAEAVREVY 28.429956 568.783068835735 1698192.875 5431.0 nc|ENSG00000101343|Q9BZJ0|CRNKL1;;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;;ENSG00000101343|ENST00000536226|CRNKL1 5.866058190663655 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5433 28.444 800.0 73181.0 25 0 3847.1 8620 EVEEDEYKAFY 11 107 711.3077767223893 1420.6010005115786 2 711.3073608279228 MULTI CID FTMS 0 0 0 5431 67538.53125 0.0943600268178872 3 -0.0840053558349609 2 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 8.155526934196011 0.8366696279279818 2 AQQNA{M(Oxidation (M))|F}Y 7 8 31.431 0.0 0.0 2.2125 0.0 0.0 580.2233884893033 0.0 580.2233884893033 0.0 16.827213416146662 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 AQQNA{M(Oxidation (M))|F}Y 2.2125 - 310 1 1.879 45351.6 0.6000000238418579 2117 3314 5431 DOHH2_400M_050219_2,5433 DOHH2_400M_050219_2,5433,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5434 28.452 475.0 273550.0 25 0 34857.0 + 30544 REMDELRSY 9 124 599.7805373975449 1197.5465218618897 2 599.7800781130791 MULTI CID FTMS 0 0 0 5431 156835.359375 1.0 0 0.0 3 Unmodified _REMDELRSY_ ENSG00000147419|ENST00000356537|CCDC25;ENST00000521220.1_1_8:27593735-27605871:-|nuORF;nc|ENSG00000147419|Q86WR0-2|CCDC25 23.80106514851385 0.2283505500606397 2 [VG]E[MD]E{I|L}RSY 10 2 + 38.525 0.0 0.0 3.217 3.217 79.899 0.0 0.0 0.0 6.830631647755041 3.2079003199564937 3.2079003199564937 14.572938755970672 0 1.9985619177777272 1.0457574905606752 0.0 0.0 [VG]E[MD]E{I|L}RSY;[VG]E{[ES]|[DT]|[{I|L}C]}D{M(Oxidation (M))|F}RPY;[VG]E[MD]EY{[TV]|[{I|L}S]}R;[VG]E{[ES]|[DT]|[{I|L}C]}D{M(Oxidation (M))|F}[TP]A{M(Oxidation (M))|F};[VG]E{[ES]|[DT]|[{I|L}C]}D{M(Oxidation (M))|F}[VG]PY;[VG]E{[ES]|[DT]|[{I|L}C]}D{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R 3.217;2.0001;1.7225;1.483;1.2348;0.9823 -;-;-;-;-;- 258 + 1 1.879 93730.4 1.0 2118 3314 5431 DOHH2_400M_050219_2,5434 DOHH2_400M_050219_2,5434,REMDELRSY False True REMDELRSY 28.452206 599.780078113079 944408.8125 5431.0 nc|ENSG00000147419|Q86WR0-2|CCDC25;;ENST00000521220.1_1_8:27593735-27605871:-|nuORF;;ENSG00000147419|ENST00000356537|CCDC25 5.2291366259257 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5435 28.46 459.0 218800.0 25 0 33719.0 + 8792 EVYHKSMTL 9 138 554.2799057677563 1106.5452586023123 2 554.2784911990166 MULTI CID FTMS 0 0 0 5431 148202.84375 0.9625520372754438 1 -0.0369644165039062 4 Unmodified _EVYHKSMTL_ ENSG00000143106|ENST00000271308|PSMA5;nc|ENSG00000143106|P28066-2|PSMA5 29.081581746732265 0.1611639662936252 2 {NN|[MP]|[D{I|L}]|[EV]}YH 4 5 36.44 0.0 0.0 3.2931 0.0 0.0 0.0 575.2884615533811 575.2884615533811 23.22045703943549 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}YH 3.2931 + + 384 + 1 1.879 80271.0 1.0 2119 3314 5431 DOHH2_400M_050219_2,5435 DOHH2_400M_050219_2,5435,EVYHKSMTL False True EVYHKSMTL 28.460349 554.278491199017 763287.375 5431.0 ENSG00000143106|ENST00000271308|PSMA5;;nc|ENSG00000143106|P28066-2|PSMA5 5.683324495951335 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5437 28.465 61.0 1291400.0 25 0 279660.0 + 6783 EEAEIIRKY 9 85 384.2081960333253 1149.602758700176 3 384.2078124880791 MULTI CID FTMS 0 0 0 5436 449269.3125 0.0931167671372566 3 -0.0696220397949218 1 Unmodified _EEAEIIRKY_ ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;ENST00000490921.5_1_1:226549163-226553858:-|nuORF 22.736283301280096 0.2418982879461534 2 EEAE{I|L}{I|L}RKY 9 0 EE + + 36.904 4.4762 1.7344 3.2101 3.2101 49.314 0.0 0.0 0.0 0.0 28.45302273736703 0.0 0.0 0 0.0 0.0 0.5 0.0 + + EEAE{I|L}{I|L}RKY 3.2101 + + 62 + 1 1.879 67442.0 1.0 2120 3315 5436 DOHH2_400M_050219_2,5437 DOHH2_400M_050219_2,5437,EEAEIIRKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5438 28.468 122.0 561470.0 25 0 66254.0 + 2131 APVPAPERK 9 78 482.78244272485216 963.5503325165045 2 482.7823669314384 MULTI CID FTMS 0 0 0 5436 449872.53125 0.3520333878944062 4 -0.0962467193603515 2 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 21.74664581756881 0.2544899275067181 2 [PA]APVK 6 -1 64.698 0.0 0.0 6.7145 0.0 0.0 0.0 397.1766451471313 397.1766451471313 50.516609670558594 0.0 0.0 0.0 0 1.8494850021680087 1.6989700043360187 0.0 0.3807196863200844 [PA]APVK 6.7145 - 61 + 1 1.879 57481.6 1.0 2121 3315 5436 DOHH2_400M_050219_2,5438 DOHH2_400M_050219_2,5438,APVPAPERK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5439 28.471 151.0 415020.0 25 0 84388.0 + 824 AETDERRLL 9 78 551.7963446536872 1101.5781363741744 2 551.7960082888603 MULTI CID FTMS 0 0 0 5436 279231.03125 0.1406680998491462 3 -0.0696220397949218 3 Unmodified _AETDERRLL_ ENST00000337288.9_2_2:96874284-96874539:-|nuORF 19.256988751693697 0.3154191944385105 2 {I|L}{I|L} 2 7 18.583 0.0 0.0 1.687 0.0 0.0 0.0 872.3845224617885 872.3845224617885 7.105319037595876 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}{I|L} 1.687 + + 25 + 1 1.879 54899.5 1.0 2122 3315 5436 DOHH2_400M_050219_2,5439 DOHH2_400M_050219_2,5439,AETDERRLL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5440 28.475 203.0 403270.0 25 0 53528.0 + 6781 EEAEIIRKY 9 90 575.8088416012015 1149.603130269203 2 575.8091308474541 MULTI CID FTMS 0 0 0 5436 246257.59375 0.0850487577695256 3 -0.0696220397949218 4 Unmodified _EEAEIIRKY_ ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;ENST00000490921.5_1_1:226549163-226553858:-|nuORF 62.57269311338072 0.0246576765497938 2 EEAE{I|L}{I|L}RKY 9 0 + 67.312 0.0 0.0 5.8553 5.8553 92.321 0.0 0.0 0.0 54.21331608302853 11.215686636715027 11.215686636715027 55.25072226357213 0 1.0021934810768762 2.0 0.0 0.0 + + EEAE{I|L}{I|L}RKY;[QA]WW{I|L}RKY;[QA]WW{I|L}[VG]KY 5.8553;1.0492;0.24351 +;-;- + 93 + 1 1.879 67725.7 1.0 2123 3315 5436 DOHH2_400M_050219_2,5440 DOHH2_400M_050219_2,5440,EEAEIIRKY True True EEAEIIRKY 28.474557 575.809130847454 82288572.0 5436.0 ENST00000490921.5_1_1:226549163-226553858:-|nuORF;;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;;ENSG00000143799|ENST00000366794|PARP1 7.183692296346028 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5441 28.479 227.0 386120.0 25 0 25585.0 23892 LVLRDILHL 9 124 364.5694329570316 1090.686469471295 3 364.5693237185478 MULTI CID FTMS 0 0 0 5436 135616.6875 0.443161828724406 -4 0.2757339477539062 5 Unmodified _LVLRDILHL_ ENSG00000121417|ENST00000240731|ZNF211;nc|ENSG00000121417|Q13398-2|ZNF211;nc|ENSG00000121417|Q13398-3|ZNF211;nc|ENSG00000121417|Q13398-4|ZNF211;nc|ENSG00000121417|Q13398-5|ZNF211;nc|ENSG00000121417|Q13398-6|ZNF211;nc|ENSG00000121417|Q13398-8|ZNF211;nc|ENSG00000121417|Q13398|ZNF211 21.74664581756881 0.2544899275067181 2 V{I|L}K{I|L} 4 6 58.686 0.0 0.0 5.3806 0.0 0.0 0.0 634.3352144830686 634.3352144830686 47.09183145787911 0.0 0.0 0.0 0 0.4005149978319906 2.0 0.0 0.4247425010840047 V{I|L}K{I|L} 5.3806 - 117 + 1 1.879 76507.2 1.0 2124 3315 5436 DOHH2_400M_050219_2,5441 DOHH2_400M_050219_2,5441,LVLRDILHL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5442 28.484 269.0 198450.0 25 0 17771.0 + 16611 KEEPPQPQL 9 94 533.2819029729502 1064.5492530127003 2 533.2805663943291 MULTI CID FTMS 0 0 0 5436 83670.4375 0.9611614116589536 1 -0.0234508514404296 6 Unmodified _KEEPPQPQL_ ENSG00000101084|ENST00000344795|RAB5IF;ENST00000491113.1_1_20:35234354-35236222:+|nuORF;nc|ENSG00000101084|Q9BUV8-3|RAB5IF;nc|ENSG00000101084|Q9BUV8-4|RAB5IF;nc|ENSG00000101084|Q9BUV8-5|RAB5IF;nc|ENSG00000101084|Q9BUV8|RAB5IF 13.90604991867851 0.4602628045680013 2 Y 1 9 12.764 0.0 0.0 1.199 0.0 0.0 883.4750628044957 0.0 883.4750628044957 0.0 1.3442265614629 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.199 - 71 + 1 1.879 49069.9 1.0 2125 3315 5436 DOHH2_400M_050219_2,5442 DOHH2_400M_050219_2,5442,KEEPPQPQL False True KEEPPQPQL 28.483801 533.2824 1038727.0 5436.0 nc|ENSG00000101084|Q9BUV8|RAB5IF;;ENSG00000101084|ENST00000344795|RAB5IF;;nc|ENSG00000101084|Q9BUV8-4|RAB5IF;;nc|ENSG00000101084|Q9BUV8-5|RAB5IF;;nc|ENSG00000101084|Q9BUV8-3|RAB5IF;;ENST00000491113.1_1_20:35234354-35236222:+|nuORF 5.123875935872396 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5444 28.5 800.0 187810.0 25 0 12121.0 + 676 AEMNRGSNEW 10 165 597.2537162256918 1192.4928795181836 2 597.2538329958916 MULTI CID FTMS 0 0 0 5443 153310.609375 0.1747634572727644 4 -0.0766525268554687 1 Unmodified _AEMNRGSNEW_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENST00000568339.5_1_16:85839106-85839475:+|nuORF 80.6760300276096 0.0165137828474802 2 [WE]D{[QV]|[N{I|L}]|[RA]|[KV]}MAEW 9 6 + 53.935 0.0 0.0 4.5229 4.5229 76.225 0.0 0.0 0.0 0.7378621416091846 21.49527338021214 0.7378621416091846 4.816884762974347 0 0.9802046884880936 0.0 0.3252574989159953 0.8996498648046138 [WE]D{[QV]|[N{I|L}]|[RA]|[KV]}MAEW;[PS]MD{[QV]|[N{I|L}]|[RA]|[KV]}MAEW;[WE]{[ET]|[MV]}NEAEW;[WE]D{[QV]|[N{I|L}]|[RA]|[KV]}MEAW;[PS]M{[ET]|[MV]}NEAEW;[WE]D[KT]EAE{[DA]|[EG]};[PS]MD{[QV]|[N{I|L}]|[RA]|[KV]}MEAW;[WE]{[ET]|[MV]}NEEAW;[PS]MD[KT]EAE{[DA]|[EG]};[MT]TAEN[C(Carbamidomethyl (C))N]RP 4.5229;4.119;4.0608;3.7212;3.6569;3.4983;3.3173;3.2592;3.098;3.0741 -;-;-;-;-;-;-;-;-;- 1341 1 1.879 110225.4 0.8999999761581421 2126 3316 5443 DOHH2_400M_050219_2,5444 DOHH2_400M_050219_2,5444,AEMNRGSNEW True True AEMNRGSNEW 28.500178 597.253832995892 9322694.0 5443.0 ENST00000568339.5_1_16:85839106-85839475:+|nuORF;;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;;ENSG00000131143|ENST00000253452|COX4I1;;ENST00000564648.1_1_16:85839106-85840477:+|nuORF 7.1908213297526045 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5445 28.507 403.0 234280.0 25 0 15837.0 + 7142 EENFPENKEY 10 112 649.7804967672452 1297.5464406012902 2 649.7799560427666 MULTI CID FTMS 0 0 0 5443 188112.640625 0.476030789037287 5 -0.1444511413574218 2 Unmodified _EENFPENKEY_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 69.33821966488729 0.0189579340102328 2 EEN{M(Oxidation (M))|F}EPT{[MS]|[{M(Oxidation (M))|F}A]}N 10 6 64.892 0.0 0.0 5.0011 0.0 0.0 0.0 116.05085931949452 116.05085931949452 38.11649464863129 0.0 0.0 0.0 0 1.0356668758921828 1.3979400086720375 0.3494850021680094 0.9436726795685342 EEN{M(Oxidation (M))|F}EPT{[MS]|[{M(Oxidation (M))|F}A]}N 5.0011 - 1030 + 1 1.879 75440.3 1.0 2127 3316 5443 DOHH2_400M_050219_2,5445 DOHH2_400M_050219_2,5445,EENFPENKEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5447 28.524 800.0 181040.0 25 0 13564.0 34545 SPASTHSLSY 10 172 525.2482292708711 1048.481905608542 2 525.2476684451103 MULTI CID FTMS 0 0 0 5446 143028.78125 0.5726506607397905 -4 0.1148605346679687 1 Unmodified _SPASTHSLSY_ ENSG00000215277|ENST00000430154|RNF212B 32.30548876998284 0.2428506522065767 2 STV[PS]QSY 8 6 54.945 0.0 0.0 5.2404 0.0 0.0 181.0751362712237 0.0 181.0751362712237 0.0 43.83568958453017 0.0 0.0 0 0.25 0.0 1.4308845489566888 0.0 STV[PS]QSY 5.2404 - 2853 + 1 1.879 116090.4 0.5 2128 3317 5446 DOHH2_400M_050219_2,5447 DOHH2_400M_050219_2,5447,SPASTHSLSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5448 28.527 172.0 725270.0 25 0 140440.0 + 32988 SENDTYFKKY 10 93 432.203553129992 1293.588829990176 3 432.2029296755791 MULTI CID FTMS 0 0 0 5446 234084.0625 0.1717733772580156 -5 0.2056045532226562 2 Unmodified _SENDTYFKKY_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 45.739877483867886 0.1051543674217965 2 {[ES]|[DT]|[{I|L}C]}NDTY{M(Oxidation (M))|F}KKY 10 0 + 50.627 0.0 0.0 3.9137 3.9137 78.661 0.0 0.0 0.0 38.40849672074418 11.505149978319906 11.505149978319906 9.164539485499262 0 0.5941876774005248 0.0 0.0 0.5 + + {[ES]|[DT]|[{I|L}C]}NDTY{M(Oxidation (M))|F}KKY;{[ES]|[DT]|[{I|L}C]}GGDTY{M(Oxidation (M))|F}KKY;{[ES]|[DT]|[{I|L}C]}NDT[C(Carbamidomethyl (C))R]R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ES]|[DT]|[{I|L}C]}NN[HQ]{M(Oxidation (M))|F}KKY;{[ES]|[DT]|[{I|L}C]}GGDT[C(Carbamidomethyl (C))R]R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ES]|[DT]|[{I|L}C]}NGG[HQ]{M(Oxidation (M))|F}KKY;{[ES]|[DT]|[{I|L}C]}GGN[HQ]{M(Oxidation (M))|F}KKY;{[ES]|[DT]|[{I|L}C]}NN[WP][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.9137;3.2052;2.8649;2.4642;2.1564;1.7557;1.7557;0.85539 +;-;-;-;-;-;-;- + 162 + 1 1.879 106742.3 1.0 2129 3317 5446 DOHH2_400M_050219_2,5448 DOHH2_400M_050219_2,5448,SENDTYFKKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5449 28.53 142.0 353420.0 25 0 35334.0 40877 VLQQRQTI 8 90 493.2932256005797 984.5718982679596 2 493.2928344607353 MULTI CID FTMS 0 0 0 5446 222375.90625 0.8947544917347453 -2 0.0470409393310546 3 Unmodified _VLQQRQTI_ ENSG00000125046|ENST00000544814|SSUH2;ENST00000413305.5_1_3:8661556-8676112:-|nuORF;ENST00000420394.5_1_3:8661556-8693727:-|nuORF;nc|ENSG00000125046|Q9Y2M2-1|SSUH2;nc|ENSG00000125046|Q9Y2M2-3|SSUH2 20.871210003555333 0.6025813472596342 2 CNGVH{I|L}T{I|L} 8 6 36.631 0.0 0.0 3.7205 0.0 0.0 129.1561400665907 0.0 129.1561400665907 0.0 19.23516269895728 0.0 0.0 0 0.3182503180159344 0.0 0.3807196863200844 0.0 CNGVH{I|L}T{I|L} 3.7205 - 212 + 1 1.879 43100.1 1.0 2130 3317 5446 DOHH2_400M_050219_2,5449 DOHH2_400M_050219_2,5449,VLQQRQTI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5451 28.536 159.0 343730.0 25 0 33940.0 + 10411 FTAERSSYY 9 82 562.2560049022392 1122.4974568712782 2 562.2560912966728 MULTI CID FTMS 0 0 0 5450 182677.1875 0.6096746837955361 -1 0.0225811004638671 1 Unmodified _FTAERSSYY_ ENSG00000197157|ENST00000354725|SND1 41.95555342248728 0.0647214845423414 2 T[WH]MEATE 8 8 40.182 0.0 0.0 3.5797 0.0 0.0 119.07379347968906 0.0 119.07379347968906 0.0 13.416375079047498 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 T[WH]MEATE 3.5797 - 216 1 1.879 46766.8 1.0 2131 3318 5450 DOHH2_400M_050219_2,5451 DOHH2_400M_050219_2,5451,FTAERSSYY True True FTAERSSYY 28.535663 562.256091296673 1535535.0 5450.0 ENSG00000197157|ENST00000354725|SND1 7.76674207051595 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5452 28.546 584.0 197150.0 25 0 47502.0 + 11131 GEIDRARAIY 10 104 582.3111769040042 1162.6078008748084 2 582.3107177615166 MULTI CID FTMS 0 0 0 5450 111431.375 0.8923971640932299 -1 0.0225811004638671 2 Unmodified _GEIDRARAIY_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7685297-7685959:-|nuORF;ENST00000600230.1_1_19:7685297-7686162:-|nuORF 31.26834338654808 0.266153677697784 2 {I|L}Q 2 9 21.766 0.0 0.0 1.8722 0.0 0.0 903.4542191871116 0.0 903.4542191871116 0.0 3.3547064036788754 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {I|L}Q 1.8722 - 85 + 1 1.879 90302.3 1.0 2132 3318 5450 DOHH2_400M_050219_2,5452 DOHH2_400M_050219_2,5452,GEIDRARAIY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5453 28.551 275.0 307490.0 25 0 22936.0 + 41395 VPLAYPTMDK 10 98 378.8678372809278 1133.5816824429835 3 378.8679992556572 MULTI CID FTMS 0 0 0 5450 139394.6875 0.9071941316490378 -2 0.0461711883544921 3 Unmodified _VPLAYPTMDK_ REV__ENSG00000163026|ENST00000295148|WDCP;REV__nc|ENSG00000163026|Q9H6R7-2|WDCP 13.042465956692816 0.6287021003332052 2 V{I|L}[Y{M(Oxidation (M))|F}]E 5 -1 34.437 0.0 0.0 3.0379 0.0 0.0 0.0 479.2613009088501 479.2613009088501 18.785510249073862 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 V{I|L}[Y{M(Oxidation (M))|F}]E 3.0379 - 116 + 1 1.879 76983.8 1.0 2133 3318 5450 DOHH2_400M_050219_2,5453 DOHH2_400M_050219_2,5453,VPLAYPTMDK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5454 28.557 307.0 277660.0 25 0 90527.0 -1 0 74 484.2723027384528 483.2650262718528 1 484.2709228396416 MULTI CID FTMS 0 0 0 5450 110841.1875 0.6522224345063985 -5 0.1374416351318359 4 2 {I|L} 1 -1 10.278 0.0 0.0 2.1267 0.0 0.0 352.170312992359 0.0 352.170312992359 0.0 -1.886950538047344 -1.886950538047344 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.1267 - 8 + 1 1.879 69064.6 1.0 2134 3318 5450 DOHH2_400M_050219_2,5454 DOHH2_400M_050219_2,5454, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5457 28.566 96.0 563920.0 25 0 116480.0 + 7030 EELDPESREY 10 60 633.7782452272635 1265.5419375213269 2 633.7783080935478 MULTI CID FTMS 0 0 0 5456 462642.4375 0.7289309284705632 -1 0.0038566589355468 1 Unmodified _EELDPESREY_ ENSG00000183617|ENST00000330133|MRPL54 38.61474834105838 0.1721950110283317 2 EE{I|L}DPES{[RE]|[WV]}Y 10 0 + 66.999 0.0 0.0 5.2941 5.2941 88.456 0.0 0.0 0.0 54.23520679637729 7.971062485323515 7.971062485323515 21.70840910703678 0 0.5 1.6989700043360187 0.3807196863200844 0.4247425010840047 + + EE{I|L}DPES{[RE]|[WV]}Y;{[ET]|[MV]}[HV]SEPD{I|L}[HC];{NN|[MP]|[D{I|L}]|[EV]}[HT]SEPD{I|L}[HC];[EP]V[YQ]YD{I|L}[HC];{NN|[MP]|[D{I|L}]|[EV]}P[YQ]YD{I|L}[HC];[DP]{I|L}[YQ]YD{I|L}[HC];{[ET]|[MV]}[HT][DV]PD{I|L}[HC];[DP]QQ[DV]PD{I|L}[HC];{NN|[MP]|[D{I|L}]|[EV]}P{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y[{M(Oxidation (M))|F}V][HC] 5.2941;3.5788;3.4195;3.1569;2.6046;2.5281;2.1959;1.96;0.090391 +;-;-;-;-;-;-;-;- + 186 + 1 1.879 48579.1 1.0 2135 3320 5456 DOHH2_400M_050219_2,5457 DOHH2_400M_050219_2,5457,EELDPESREY False True EELDPESREY 28.565936 633.778308093548 12354099.0 5456.0 ENSG00000183617|ENST00000330133|MRPL54 9.062754154205322 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5458 28.58 800.0 271770.0 25 0 18452.0 + 5742 DPMKARVVL 9 168 522.7971840125145 1043.579815091829 2 522.7966796755791 MULTI CID FTMS 0 0 0 5456 256893.765625 0.3351144124218408 7 -0.4487380981445312 2 Oxidation (M) _DPM(Oxidation (M))KARVVL_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 53.832793166522166 0.0319663582346103 2 DP{M(Oxidation (M))|F}KA[RV]V{I|L} 9 0 + 55.355 0.0 0.0 5.3043 5.3043 89.02 0.0 0.0 0.0 21.33705679094337 9.22508200162774 9.22508200162774 25.59153463703876 0 1.3962566630072957 1.6989700043360187 0.0 0.0 + + DP{M(Oxidation (M))|F}KA[RV]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HT]G[YQ]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HT]G[YK]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HT]G{[HG]|PP}PV{I|L};[DP][RP]G[YK]V{I|L};[DP][RP]G{[HG]|PP}PV{I|L};D{I|L}RR{[TV]|[{I|L}S]}{[RE]|[WV]};{[QV]|[N{I|L}]|[RA]|[KV]}[WK]{[SA]|[TG]}NV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HK][HS]PV{I|L};{[TV]|[{I|L}S]}[HQ]G[YK]V{I|L} 5.3043;2.852;2.852;2.7702;2.672;2.5902;2.4268;2.3281;2.0215;1.9857 +;-;-;-;-;-;-;-;-;- + 1702 + 1 1.879 172700.6 0.9200000166893004 2136 3320 5456 DOHH2_400M_050219_2,5458 DOHH2_400M_050219_2,5458,DPMKARVVL True False DPMKARVVL 28.57977 522.796679675579 9162585.0 5456.0 ENSG00000143742|ENST00000304786|SRP9;;nc|ENSG00000143742|P49458-2|SRP9 8.739646911621094 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5459 28.583 161.0 514670.0 25 0 58140.0 39536 VAVMFASI 8 96 419.2304709891116 836.4463890450231 2 419.2316161990166 MULTI CID FTMS 0 0 0 5456 254746.25 0.2525088167204433 9 -0.497415542602539 3 Unmodified _VAVMFASI_ ENSG00000173175|ENST00000462833|ADCY5;ENSG00000174233|ENST00000357869|ADCY6;ENST00000547260.5_1_12:49165333-49167887:-|nuORF;ENST00000552099.5_1_12:49165333-49167571:-|nuORF;nc|ENSG00000173175|O95622-2|ADCY5;nc|ENSG00000174233|O43306-2|ADCY6 28.17323086031832 0.4514957916281387 2 D{I|L} 2 7 28.469 0.0 0.0 3.4036 0.0 0.0 590.3290566980324 0.0 590.3290566980324 0.0 8.208253071758875 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 D{I|L} 3.4036 - 63 1 1.879 72806.4 1.0 2137 3320 5456 DOHH2_400M_050219_2,5459 DOHH2_400M_050219_2,5459,VAVMFASI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5460 28.597 800.0 230780.0 25 0 16063.0 + 32990 SENDTYFKKY 10 143 647.8012641851028 1293.5879754370055 2 647.8015624880791 MULTI CID FTMS 0 0 0 5456 202860.890625 0.471788953803547 -2 0.0304813385009765 4 Unmodified _SENDTYFKKY_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 128.5786326129116 0.0002163543161949 2 SENDTY{M(Oxidation (M))|F}KKY 10 0 + 128.63 0.0 0.0 9.9433 9.9433 91.313 0.0 0.0 0.0 35.02697515943355 7.653879394359777 7.653879394359777 7.653879394359777 0 2.385151878060192 2.0 0.5 1.066901560044258 + + SENDTY{M(Oxidation (M))|F}KKY;SENDTY{M(Oxidation (M))|F}KYK;SEGGDTY{M(Oxidation (M))|F}KKY;SEGGDTY{M(Oxidation (M))|F}KYK;SENDTY[R{I|L}]P{[CP]|[EA]};SEGGDTY[R{I|L}]P{[CP]|[EA]};SEND[NS][{I|L}P]QKY;SEND[NS][{I|L}P]QYK;YS{M(Oxidation (M))|F}ND{[ET]|[MV]}KKY;SY{M(Oxidation (M))|F}ND{[ET]|[MV]}KKY 9.9433;9.3517;9.2349;8.6432;7.0192;6.3135;6.1756;5.5839;4.452;4.3115 +;-;-;-;-;-;-;-;-;- + 2368 + 1 1.879 140333.3 0.8799999952316284 2138 3320 5456 DOHH2_400M_050219_2,5460 DOHH2_400M_050219_2,5460,SENDTYFKKY True True SENDTYFKKY 28.596778 647.801562488079 19277342.25 5456.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 8.525818506876627 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5461 28.611 800.0 120080.0 25 0 4370.9 6723 EDKRQDMANAF 11 124 662.7996280711216 1323.584703209043 2 662.8002807497978 MULTI CID FTMS 0 0 0 5456 142737.359375 0.1704242484438455 7 -0.4487380981445312 5 Unmodified _EDKRQDMANAF_ ENSG00000062598|ENST00000290246|ELMO2;ENST00000480042.5_1_20:45008831-45014791:-|nuORF;nc|ENSG00000062598|Q96JJ3-3|ELMO2 19.361941925380144 0.6323962752489956 2 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F} 13 9 + 108.67 0.0 0.0 8.2106 8.2106 87.934 0.0 0.0 0.0 17.099653886374824 16.642078980768076 16.642078980768076 5.610692802004593 0 0.9749073637206092 1.0457574905606752 0.0 1.7491348669726232 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AGG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GQ{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}QG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AN{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AGG{M(Oxidation (M))|F}EA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}AGG{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F} 8.2106;7.7867;7.7054;7.5251;7.5251;7.5251;7.478;7.2815;7.1012;7.1012 -;-;-;-;-;-;-;-;-;- 2431 1 1.879 70852.3 0.75 2139 3320 5456 DOHH2_400M_050219_2,5461 DOHH2_400M_050219_2,5461,EDKRQDMANAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5462 28.615 215.0 277690.0 25 0 33989.0 -1 0 96 412.2029835652376 411.1957070986376 1 412.2030822634697 MULTI CID FTMS 0 0 0 5456 140443.734375 0.9375324257293038 1 -0.0677986145019531 6 2 HY 2 -1 13.979 0.0 0.0 3.3997 0.0 0.0 93.0630675435702 0.0 93.0630675435702 0.0 3.701813447471221 0.0 0.0 0 0.0 0.0 0.0 0.0 HY 3.3997 - 19 + 1 1.879 51142.6 1.0 2140 3320 5456 DOHH2_400M_050219_2,5462 DOHH2_400M_050219_2,5462, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5463 28.619 210.0 289750.0 25 0 40032.0 + -1 ATGANATPLD 10 82 486.7355629374608 971.4565729417216 2 486.7354614138603 MULTI CID FTMS 0 0 0 5456 141571.71875 1.0 0 0.0 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ATGANATPLD_ nc|ENSG00000168066|Q15637-6|SF1;ENST00000463343.1_1_11:64543889-64545891:-|nuORF;ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-2|SF1;ENST00000482693.1_1_11:64540804-64545891:-|nuORF;nc|ENSG00000168066|Q15637-3|SF1 26.268140514670165 0.3785003716575977 2 {[CP]|[EA]}AA{[QG]|[NA]}TP{I|L}D 10 -1 {[CP]|[EA]}AA{[QG]|[NA]}T + + 14.157 8.3497 1.329 1.4573 1.4573 47.064 0.0 0.0 0.0 0.0 4.503187623076954 0.0 0.0 0 0.0 0.0 0.0 0.0 {[CP]|[EA]}AA{[QG]|[NA]}TP{I|L}D 1.4573 - 64 + 1 1.879 52053.2 1.0 2141 3320 5456 DOHH2_400M_050219_2,5463 DOHH2_400M_050219_2,5463,ATGANATPLD False False ATGANATPLD 28.618661 486.73546141386 666491.5 5456.0 nc|ENSG00000168066|Q15637-6|SF1;;ENST00000463343.1_1_11:64543889-64545891:-|nuORF;;ENSG00000168066|ENST00000377390|SF1;;nc|ENSG00000168066|Q15637-4|SF1;;nc|ENSG00000168066|Q15637-2|SF1;;ENST00000482693.1_1_11:64540804-64545891:-|nuORF;;nc|ENSG00000168066|Q15637-3|SF1 5.89213228225708 2.0 True 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5464 28.628 474.0 208490.0 25 0 19447.0 + 8595 ETWRTEAPS 9 132 538.7542254045377 1075.4938978758753 2 538.7544433474541 MULTI CID FTMS 0 0 0 5456 99801.296875 0.3761224582090934 -3 0.0530624389648437 8 Unmodified _ETWRTEAPS_ ENSG00000182871|ENST00000651438|COL18A1;ENST00000473212.1_1_21:46927018-46932309:+|nuORF;nc|ENSG00000182871|P39060-1|COL18A1;nc|ENSG00000182871|P39060|COL18A1 32.30548876998284 0.1201446275138228 2 SPDP 4 8 19.926 0.0 0.0 1.8528 0.0 0.0 661.3232289044937 0.0 661.3232289044937 0.0 -1.2715262760735335 -1.2715262760735335 0.0 0 0.3851518780601923 0.0 0.2887254899964357 0.0 SPDP 1.8528 - 147 1 1.879 81280.5 1.0 2142 3320 5456 DOHH2_400M_050219_2,5464 DOHH2_400M_050219_2,5464,ETWRTEAPS True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5466 28.635 234.0 192760.0 25 0 14820.0 + 2928 AVGVCPLDTL 10 91 494.2641661866261 986.5137794400522 2 494.2645751833916 MULTI CID FTMS 0 0 0 5465 79668.65625 0.333371080737382 1 -0.0656700134277343 1 Unmodified _AVGVCPLDTL_ REV__ENSG00000173818|ENST00000518137|ENDOV;REV__ENST00000520118.5_1_17:78397327-78397498:+|nuORF;REV__ENST00000521330.6_1_17:78388994-78402256:+|nuORF;REV__nc|ENSG00000173818|Q8N8Q3-2|ENDOV;REV__nc|ENSG00000173818|Q8N8Q3-3|ENDOV;REV__nc|ENSG00000173818|Q8N8Q3-6|ENDOV;REV__nc|ENSG00000173818|Q8N8Q3-7|ENDOV 26.88365393820708 0.3646707531412818 2 VGDT{I|L} 5 -1 38.188 0.0 0.0 3.871 0.0 0.0 483.2533741681656 0.0 483.2533741681656 0.0 22.703037561203843 0.0 0.0 0 0.5 0.0 0.0 0.0 VGDT{I|L} 3.871 - 223 1 1.879 39033.4 1.0 2143 3321 5465 DOHH2_400M_050219_2,5466 DOHH2_400M_050219_2,5466,AVGVCPLDTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5467 28.642 378.0 182820.0 25 0 52790.0 13897 HVSISIDQI 9 89 506.2784282297167 0 506.2780334353447 PEAK CID FTMS 0 0 0 5465 92180.7109375 0.4582516381372361 25 -1.4400348663330078 2 Unmodified _HVSISIDQI_ ENSG00000077935|ENST00000357450|SMC1B;nc|ENSG00000077935|Q8NDV3-2|SMC1B 4.3292370932331545 0.3444685223463734 2 H 1 8 0.9691 0.0 0.0 0.095899 0.0 0.0 802.4089092164663 68.05135523013905 870.4602644466054 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 0.095899 + + 2 + 1 1.879 59531.9 1.0 2144 3321 5465 DOHH2_400M_050219_2,5467 DOHH2_400M_050219_2,5467,HVSISIDQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5468 28.647 251.0 374810.0 25 0 38554.0 + 5434 DLNKDKPVI 9 127 521.2997283932604 1040.5849038533206 2 521.3002807497978 MULTI CID FTMS 0 0 0 5465 238930.34375 1.0 0 0.0 3 Unmodified _DLNKDKPVI_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-4|ETS1;nc|ENSG00000134954|P14921|ETS1 43.9818466556824 0.0535980856389242 2 D{I|L}NKDKPV{I|L} 9 0 + 69.707 0.0 0.0 6.6988 6.6988 89.133 0.0 0.0 0.0 54.22204952230746 4.959371173213071 4.959371173213071 9.208187539523742 0 1.5356668758921828 2.0 0.0 0.3807196863200844 + + D{I|L}NKDKPV{I|L};D{I|L}GGKDKPV{I|L};D{I|L}[YK]{[HG]|PP}PV{I|L} 6.6988;5.8139;3.9311 +;-;- + 373 + 1 1.879 77619.5 1.0 2145 3321 5465 DOHH2_400M_050219_2,5468 DOHH2_400M_050219_2,5468,DLNKDKPVI True True DLNKDKPVI 28.646648 521.300280749798 1469331.125 5465.0 ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;nc|ENSG00000134954|P14921-4|ETS1 4.502599398295085 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5469 28.66 800.0 169160.0 25 0 14257.0 + 42386 VTDQNKIVTY 10 147 590.814425900748 1179.614298868296 2 590.8142578005791 MULTI CID FTMS 0 0 0 5465 182799.296875 1.0 0 0.0 4 Unmodified _VTDQNKIVTY_ ENSG00000077514|ENST00000263681|POLD3;ENST00000532497.5_1_11:74303703-74322559:+|nuORF;ENST00000532784.5_1_11:74303703-74306426:+|nuORF 80.89551112106177 0.0163339094631175 2 {[TV]|[{I|L}S]}DQNK{I|L}VTY 10 0 + 75.684 0.0 0.0 6.416 6.416 87.6 0.0 0.0 0.0 10.044321917401078 10.044321917401078 10.044321917401078 9.164539485499247 0 2.242992819099939 1.6989700043360187 1.0114393726401687 0.6307196863200843 + + {[TV]|[{I|L}S]}DQNK{I|L}VTY;{[TV]|[{I|L}S]}DQGGK{I|L}VTY;{[TV]|[{I|L}S]}D[AG]NK{I|L}VTY;VT[QA]RRWTY;{[TV]|[{I|L}S]}DQNKV{I|L}TY;{[TV]|[{I|L}S]}DQ[KQ]VVTY;{[TV]|[{I|L}S]}D[AG]GGK{I|L}VTY;VT[{I|L}P]TWTVTY;{[QD]|[EN]|[WG]|[KD]|[RS]}NK{I|L}S{I|L}VTY;VT[{I|L}P]T{[TV]|[{I|L}S]}WTY 6.416;5.6391;5.6391;5.5645;5.3395;5.2476;4.8653;4.6645;4.6047;4.5985 +;-;-;-;-;-;-;-;-;- + 3068 1 1.879 106756.1 0.7599999904632568 2146 3321 5465 DOHH2_400M_050219_2,5469 DOHH2_400M_050219_2,5469,VTDQNKIVTY True True VTDQNKIVTY 28.66048 590.814257800579 975766.25 5465.0 ENST00000532784.5_1_11:74303703-74306426:+|nuORF;;ENSG00000077514|ENST00000263681|POLD3;;ENST00000532497.5_1_11:74303703-74322559:+|nuORF 7.475461641947429 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5470 28.664 193.0 359190.0 25 0 38679.0 + 11190 GEMPRNLREY 10 79 422.207649309353 1263.601118528259 3 422.2073852419853 MULTI CID FTMS 0 0 0 5465 122162.2109375 0.4080902049350094 -2 0.0716552734375 5 Unmodified _GEMPRNLREY_ ENSG00000104549|ENST00000265896|SQLE 21.799462835604743 0.4789045305445478 2 {[DA]|[EG]}M[RP]V 6 5 40.29 0.0 0.0 3.1885 0.0 0.0 0.0 591.2619378245997 591.2619378245997 26.31105604145162 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3807196863200844 {[DA]|[EG]}M[RP]V 3.1885 - 35 + 1 1.879 59358.3 1.0 2147 3321 5465 DOHH2_400M_050219_2,5470 DOHH2_400M_050219_2,5470,GEMPRNLREY False True GEMPRNLREY 28.664181 422.207385241985 1563571.25 5465.0 ENSG00000104549|ENST00000265896|SQLE 7.441155751546224 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5471 28.673 505.0 133980.0 25 0 14183.0 + 6262 DTRSDDPSV 9 99 496.21968733965366 990.4248217461072 2 496.2194396853447 MULTI CID FTMS 0 0 0 5465 110490.0 1.0 0 0.0 6 Unmodified _DTRSDDPSV_ REV__ENSG00000154864|ENST00000674853|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5-2|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5|PIEZO2 21.74664581756881 0.2544899275067181 2 SV 2 -1 20.674 0.0 0.0 2.0874 0.0 0.0 786.3137968211058 0.0 786.3137968211058 0.0 8.684151806525389 0.0 0.0 0 0.3807196863200844 0.0 0.2887254899964357 0.0 SV 2.0874 + + 72 + 1 1.879 56044.1 1.0 2148 3321 5465 DOHH2_400M_050219_2,5471 DOHH2_400M_050219_2,5471,DTRSDDPSV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5472 28.678 271.0 301450.0 25 0 21367.0 + 13078 HEATDSGVAAL 11 118 535.7599370411203 1069.5053211490406 2 535.7585937380791 MULTI CID FTMS 0 0 0 5465 120752.1640625 0.1612662331754421 -3 0.0982799530029296 7 Unmodified _HEATDSGVAAL_ REV__ENST00000536896.2_1_1:26145941-26146436:-|nuORF 27.628801355627647 0.4434699450731472 2 [HA]EDT[WK]A{I|L} 9 -1 + 51.647 0.0 0.0 4.829 4.829 86.84 0.0 0.0 0.0 34.65690701563496 4.730998004688104 4.730998004688104 22.67265551938308 0 2.25 0.0 0.3494850021680094 0.0 [HA]EDT[WK]A{I|L};[HA]E[{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L};{[SA]|[TG]}D[YV]{[CA]|SS}GTA{I|L};[HA]EHHQQA{I|L};{[ES]|[DT]|[{I|L}C]}[YR]{[CA]|SS}GTA{I|L};[{M(Oxidation (M))|F}V]CCT[WK]A{I|L};{[SA]|[TG]}D[YV][KC]TA{I|L};{[ES]|[DT]|[{I|L}C]}G[YV]{[CA]|SS}GTA{I|L};{[ES]|[DT]|[{I|L}C]}[YR]{[QC]|[C(Carbamidomethyl (C))A]}TA{I|L};{[ES]|[DT]|[{I|L}C]}[YR][KC]TA{I|L} 4.829;2.7091;2.5444;2.4902;2.3068;2.3025;2.211;2.1314;1.9775;1.9775 -;-;-;-;-;-;-;-;-;- 507 + 1 1.879 65955.5 1.0 2149 3321 5465 DOHH2_400M_050219_2,5472 DOHH2_400M_050219_2,5472,HEATDSGVAAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5473 28.692 800.0 177270.0 25 0 12654.0 + 32696 SEAATAQREEW 11 134 639.2911125487029 1276.5676721642058 2 639.2914306521416 MULTI CID FTMS 0 0 0 5465 102891.296875 0.687190446727226 -1 0.0677986145019531 8 Unmodified _SEAATAQREEW_ ENSG00000138668|ENST00000313899|HNRNPD;nc|ENSG00000138668|Q14103-3|HNRNPD 125.18120922955336 0.0506983849239639 2 {[ES]|[DT]|[{I|L}C]}AA{I|L}{M(Oxidation (M))|F}QAGPTW 12 6 + 89.092 0.0 0.0 6.979 6.979 87.465 0.0 0.0 0.0 3.881801713828821 38.01022703096637 3.881801713828821 6.937266167677208 0 2.15051499783199 0.0 1.8785696433796049 0.3252574989159953 {[ES]|[DT]|[{I|L}C]}AA{I|L}{M(Oxidation (M))|F}QAGPTW;[TA]DA{I|L}{M(Oxidation (M))|F}QAGPTW;{[ES]|[DT]|[{I|L}C]}AA{I|L}{M(Oxidation (M))|F}QAT[PG]W;{[ES]|[DT]|[{I|L}C]}AA{I|L}{M(Oxidation (M))|F}QQPTW;{[ES]|[DT]|[{I|L}C]}AA{I|L}{M(Oxidation (M))|F}[AG]AGPTW;{[ES]|[DT]|[{I|L}C]}AAT{[WT]|[RM]}AGPTW;{[ES]|[DT]|[{I|L}C]}AATAQ{M(Oxidation (M))|F}{I|L}AD[PG];{[CP]|[EA]}SA{I|L}{M(Oxidation (M))|F}QAGPTW;{[ES]|[DT]|[{I|L}C]}AAT{[WT]|[RM]}QPTW;[TA]DA{I|L}{M(Oxidation (M))|F}QAT[PG]W 6.979;6.4356;6.3312;6.2063;6.0115;5.9894;5.9853;5.965;5.8632;5.7877 -;-;-;-;-;-;-;-;-;- 14736 1 1.879 104493.2 0.5899999737739563 2150 3321 5465 DOHH2_400M_050219_2,5473 DOHH2_400M_050219_2,5473,SEAATAQREEW True True SEAATAQREEW 28.691927 639.291430652142 1017470.3125 5465.0 nc|ENSG00000138668|Q14103-3|HNRNPD;;ENSG00000138668|ENST00000313899|HNRNPD 8.14104668299357 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5474 28.694 90.0 587570.0 25 0 285140.0 + -1 PAAFERCL 8 54 482.24128622835457 962.4680195235092 2 482.2412902712822 MULTI CID FTMS 0 0 0 5465 363740.375 0.9765300235136866 -1 0.0677986145019531 9 Carbamidomethyl (C) _PAAFERC(Carbamidomethyl (C))L_ REV__ENST00000311364.8_1_5:94982811-94982973:+|nuORF 6.354104778181461 0.7857632046190106 2 [PA]A 3 -1 18.697 0.0 0.0 1.9426 0.0 0.0 0.0 720.3191297132154 720.3191297132154 17.727562184969376 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [PA]A 1.9426 + + 6 1 1.879 47998.3 1.0 2151 3321 5465 DOHH2_400M_050219_2,5474 DOHH2_400M_050219_2,5474,PAAFERCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5476 28.703 267.0 193050.0 25 0 10802.0 + 13870 HVLCARRY 8 92 509.2739546830564 1016.5333564329128 2 509.2773620486259 MULTI CID FTMS 0 0 0 5475 67251.96875 0.2292244038023295 2 -0.1229534149169921 1 Unmodified _HVLCARRY_ REV__ENSG00000163946|ENST00000683822|TASOR;REV__nc|ENSG00000163946|Q9UK61-3|TASOR;REV__nc|ENSG00000163946|Q9UK61-4|TASOR 14.581692164780916 0.6954967302934248 2 HVV 3 -1 40.367 0.0 0.0 3.971 0.0 0.0 0.0 678.3195894830686 678.3195894830686 17.14480470555396 0.0 0.0 0.0 0 0.1694451763165201 2.0 0.0 0.0 HVV 3.971 - 93 + 1 1.891 46979.0 1.0 2152 3322 5475 DOHH2_400M_050219_2,5476 DOHH2_400M_050219_2,5476,HVLCARRY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5477 28.717 800.0 158460.0 25 0 18564.0 + + 6852 EENFRDRGF 9 125 584.77232745903 1167.5301019848598 2 585.2703124880791 MULTI CID FTMS 0 0 0 5475 60947.0 0.1156350231044266 10 -0.4985904693603515 2 Unmodified _EEEAAATLTFS_ ENST00000469451.1_1_1:203830997-203832824:+|nuORF 13.042465956692816 0.7638483625850725 2 {[ET]|[MV]}{I|L}AA{M(Oxidation (M))|F}{M(Oxidation (M))|F}NQQ 10 -1 + 26.82 0.0 0.0 2.2972 2.2972 69.892 0.0 0.0 0.0 2.6638000898875447 10.63290252817086 2.6638000898875447 4.424919503323608 0 0.0 0.0 0.4247425010840047 0.0 {[ET]|[MV]}{I|L}AA{M(Oxidation (M))|F}{M(Oxidation (M))|F}NQQ;[{I|L}T]EAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}NQQ;{[TV]|[{I|L}S]}V[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}NQQ;{[TV]|[{I|L}S]}V{[DA]|[EG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}NQQ;{[ET]|[MV]}{I|L}AA{M(Oxidation (M))|F}{M(Oxidation (M))|F}GGQQ;{[ET]|[MV]}{I|L}AA{M(Oxidation (M))|F}{M(Oxidation (M))|F}N[AG]Q;[{I|L}T]YS[PA]{M(Oxidation (M))|F}NQQ;[{I|L}T]EAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}N[AG]Q;[{I|L}T]EAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}GGQQ;{[TV]|[{I|L}S]}V[HM][DP]NQQ 2.2972;1.9182;1.7955;1.5815;1.5122;1.5122;1.4992;1.1332;1.1332;1.1291 -;-;-;-;-;-;-;-;-;- 468 1 1.891 100360.6 0.6499999761581421 2153 3322 5475 DOHH2_400M_050219_2,5477 DOHH2_400M_050219_2,5477,EEEAAATLTFS False False EENFRDRGF 28.716575 585.270312488079 967096.375 5475.0 ENST00000469451.1_1_1:203830997-203832824:+|nuORF 7.292838255564372 2.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 5478 28.718 82.0 611420.0 25 0 39604.0 + 7715 ELDAVQREY 9 78 561.774871962051 1121.5351909909018 2 561.7750732302666 MULTI CID FTMS 0 0 0 5475 418570.5625 0.923656190259856 -1 0.0656700134277343 3 Unmodified _ELDAVQREY_ ENSG00000080986|ENST00000261597|NDC80 51.629811660486645 0.0367964933207742 2 {[QN]|[E{I|L}]|[KN]}DAVQ{[RE]|[WV]}Y 9 0 + 67.355 0.0 0.0 6.0056 6.0056 83.661 0.0 0.0 0.0 54.25591633931205 7.741822736656587 7.741822736656587 6.439611210946659 0 0.6861818737241735 2.0 0.3252574989159953 0.3807196863200844 + + {[QN]|[E{I|L}]|[KN]}DAVQ{[RE]|[WV]}Y;{[QN]|[E{I|L}]|[KN]}DAV[PS]A{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}DAV[AG]{[RE]|[WV]}Y;{[QN]|[E{I|L}]|[KN]}DAV[PS][QT]Y;{[QN]|[E{I|L}]|[KN]}WVQ{[RE]|[WV]}Y;{[QN]|[E{I|L}]|[KN]}WV[PS]A{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}WV[AG]{[RE]|[WV]}Y;{[QN]|[E{I|L}]|[KN]}WV[PS][QT]Y;{[QN]|[E{I|L}]|[KN]}DAVQ[HD][VP];{[QN]|[E{I|L}]|[KN]}T[PS]Q{[RE]|[WV]}Y 6.0056;5.4314;5.1846;5.1846;5.0885;4.5056;4.2627;4.2627;4.1548;3.9943 +;-;-;-;-;-;-;-;-;- + 189 + 1 1.891 45818.4 1.0 2154 3322 5475 DOHH2_400M_050219_2,5478 DOHH2_400M_050219_2,5478,ELDAVQREY True True ELDAVQREY 28.718437 561.775073230267 2337819.0 5475.0 ENSG00000080986|ENST00000261597|NDC80 7.944276491800944 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5479 28.726 429.0 350560.0 25 0 36621.0 + 5437 DLNKRVQDL 9 138 550.8067196092388 1099.5988862852776 2 550.8067504763603 MULTI CID FTMS 0 0 0 5475 202945.21875 0.54728570016407 -2 0.1334686279296875 4 Unmodified _DLNKRVQDL_ ENSG00000084652|ENST00000373610|TXLNA 107.5634045930896 0.0069862097574228 2 {I|L}DNKRVQD{I|L} 9 2 + 103.33 0.0 0.0 9.397 9.397 93.607 0.0 0.0 0.0 91.73570318966084 12.98332479720628 12.98332479720628 9.208187539523747 0 2.291447825603967 2.0 1.6989700043360187 1.0114393726401687 {I|L}DNKRVQD{I|L};{I|L}DGGKRVQD{I|L};{I|L}DNKRV[AG]D{I|L};D{I|L}NKRVQD{I|L};D{I|L}GGKRVQD{I|L};D{I|L}NKRV[AG]D{I|L};{NN|[MP]|[D{I|L}]|[EV]}NKRN{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}NKRVQD{I|L};{NN|[MP]|[D{I|L}]|[EV]}NKRVEN{I|L};{I|L}DNK[H{I|L}][{M(Oxidation (M))|F}T]{I|L} 9.397;8.5596;8.5596;8.281;7.4436;7.4436;7.1592;6.799;6.6388;6.5878 -;-;-;+;-;-;-;+;-;- + 1168 + 1 1.891 114960.6 1.0 2155 3322 5475 DOHH2_400M_050219_2,5479 DOHH2_400M_050219_2,5479,DLNKRVQDL True True DLNKRVQDL 28.726085 550.80675047636 1771712.5 5475.0 ENSG00000084652|ENST00000373610|TXLNA 6.091501553853353 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5480 28.732 297.0 348610.0 25 0 39734.0 + 6317 DVIGKAKSL 9 118 465.7846633470551 929.5547737609102 2 465.7846252322197 MULTI CID FTMS 0 0 0 5475 186631.0 0.5531994594158987 -2 0.1334686279296875 5 Unmodified _DVIGKAKSL_ ENSG00000105821|ENST00000379263|DNAJC2;ENST00000475065.5_1_7:102953018-102963086:-|nuORF;ENST00000492497.1_1_7:102956426-102956597:-|nuORF;nc|ENSG00000105821|Q99543-2|DNAJC2 57.24910588100465 0.0276051374632116 2 [DV]{I|L}GKAKS{I|L} 9 0 + 77.787 0.0 0.0 8.3682 8.3682 94.927 0.0 0.0 0.0 40.42551530008843 12.98332479720628 12.98332479720628 12.67606240177031 0 1.3807196863200843 2.0 1.066901560044258 0.0 + + [DV]{I|L}GKAKS{I|L};[DV]{I|L}[KQ]KS{I|L};{I|L}[DV]GKAKS{I|L};{I|L}[DV][KQ]KS{I|L};[KG]{I|L}AKS{I|L}[DV];[KA]VAKS{I|L}[DV];[KG]AK{I|L}S{I|L}[DV];[KQ]K{I|L}S{I|L}[DV];[KA]GK{I|L}S{I|L}[DV];[KA]KG{I|L}S{I|L}[DV] 8.3682;7.0045;5.3501;3.9865;1.8283;1.7802;1.5669;1.5542;1.5188;1.5188 +;-;-;-;-;-;-;-;-;- + 915 + 1 1.891 83671.1 1.0 2156 3322 5475 DOHH2_400M_050219_2,5480 DOHH2_400M_050219_2,5480,DVIGKAKSL True True DVIGKAKSL 28.731508 465.78462523222 1638534.0 5475.0 ENST00000492497.1_1_7:102956426-102956597:-|nuORF;;ENST00000475065.5_1_7:102953018-102963086:-|nuORF;;ENSG00000105821|ENST00000379263|DNAJC2;;nc|ENSG00000105821|Q99543-2|DNAJC2 5.212667465209961 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5481 28.734 148.0 495290.0 25 0 95762.0 + 5746 DPNFKNRL 8 90 502.2691033494676 1002.5236537657352 2 502.2696411013603 MULTI CID FTMS 0 0 0 5475 129932.578125 0.2105399597497973 6 -0.3536109924316406 6 Unmodified _DPNFKNRL_ ENSG00000173726|ENST00000366607|TOMM20 23.1484247019978 0.5573009939494978 2 DPN{M(Oxidation (M))|F}K 5 3 48.404 0.0 0.0 4.8282 0.0 0.0 0.0 398.2150667779906 398.2150667779906 37.56665733069592 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.4247425010840047 + DPN{M(Oxidation (M))|F}K 4.8282 + + 75 + 1 1.891 60013.7 1.0 2157 3322 5475 DOHH2_400M_050219_2,5481 DOHH2_400M_050219_2,5481,DPNFKNRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5482 28.744 569.0 249880.0 25 0 20810.0 + 41057 VMLPKGRL 8 126 457.2864781671036 912.5584034010072 2 458.2880432009697 MULTI CID FTMS 0 0 0 5475 118373.9375 0.7921868096993564 -1 0.0656700134277343 7 Unmodified _VMLPKGRL_ REV__ENST00000379987.6_1_4:106891525-106891783:+|nuORF 6.354104778181461 0.7857632046190106 2 P[YV]{I|L}SKPG 8 -1 27.472 0.0 0.0 3.0104 0.0 0.0 0.0 68.05130182437733 68.05130182437733 13.492304306103335 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 P[YV]{I|L}SKPG 3.0104 - 111 + 1 1.891 113079.2 1.0 2158 3322 5475 DOHH2_400M_050219_2,5482 DOHH2_400M_050219_2,5482,VMLPKGRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5483 28.758 800.0 125290.0 25 0 8656.2 8621 EVEEDEYKAFY 11 124 711.3084042204155 1420.6022555076308 2 711.3079101443291 MULTI CID FTMS 0 0 0 5475 140398.171875 1.0 0 0.0 8 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 17.11289562659939 0.6791789249425932 2 [QA]HDEAQQNA{M(Oxidation (M))|F}Y 12 8 + 60.655 0.0 0.0 4.2697 4.2697 76.286 0.0 0.0 0.0 1.8894384593729896 43.921074706359256 1.8894384593729896 6.020599913279625 0 0.8182503180159344 0.0 0.2742275032520141 1.1307196863200843 [QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]SAQQNA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QNA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;[HD][QA]EAQQNA{M(Oxidation (M))|F}Y;[QA]E[HD]AQQNA{M(Oxidation (M))|F}Y;{[{M(Oxidation (M))|F}D]|MM}[KC]SAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]SAQNQA{M(Oxidation (M))|F}Y 4.2697;3.8459;3.8119;3.6292;3.6292;3.6292;3.5207;3.4454;3.3968;3.3881 -;-;-;-;-;-;-;-;-;- 1532 1 1.891 70846.1 0.6800000071525574 2159 3322 5475 DOHH2_400M_050219_2,5483 DOHH2_400M_050219_2,5483,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5484 28.766 339.0 284960.0 25 0 134290.0 44191 YLFHPLAY 8 84 512.2674132591293 0 512.2677490115166 PEAK CID FTMS 0 0 0 5475 108773.90625 0.6056679627954517 -1 0.0656700134277343 9 Unmodified _YLFHPLAY_ ENSG00000009830|ENST00000261534|POMT2 6.354104778181461 0.5763711549229614 2 {I|L} 1 7 6.9897 0.0 0.0 0.68358 0.0 0.0 774.3676226834946 132.04570947818596 906.4133321616804 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.68358 + + 10 + 1 1.891 80458.2 1.0 2160 3322 5475 DOHH2_400M_050219_2,5484 DOHH2_400M_050219_2,5484,YLFHPLAY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5486 28.777 512.0 137370.0 25 0 8614.4 + 5203 DITEGKHSY 9 107 525.2482292708711 1048.481905608542 2 525.2482787966728 MULTI CID FTMS 0 0 0 5485 64064.453125 0.2564976859296603 2 -0.0707988739013671 1 Unmodified _DITEGKHSY_ ENST00000605123.1_1_5:154872251-154872623:+|nuORF 32.30548876998284 0.1201446275138228 2 VTSY 4 6 43.22 0.0 0.0 4.1221 0.0 0.0 580.2619135463323 0.0 580.2619135463323 0.0 21.866610889264724 0.0 0.0 0 1.0 0.0 0.8807196863200843 0.0 VTSY 4.1221 - 533 1 1.891 58965.9 1.0 2161 3323 5485 DOHH2_400M_050219_2,5486 DOHH2_400M_050219_2,5486,DITEGKHSY True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5487 28.778 46.0 2074800.0 25 0 232310.0 + 8132 EPKLKYERL 9 92 392.5642208527321 1174.6708331583964 3 392.5639831423759 MULTI CID FTMS 0 0 0 5485 1143136.875 0.6786161983298868 -1 0.0716571807861328 2 Unmodified _EPKLKYERL_ ENSG00000006715|ENST00000310301|VPS41;nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41 28.49450938151212 0.1686335738423394 2 E[KP]{I|L}KYER{I|L} 9 0 + 49.202 0.0 0.0 4.1886 4.1886 81.767 0.0 0.0 0.0 8.952424927286842 10.381068352144716 8.952424927286842 10.381068352144716 0 0.4247425010840047 0.0 0.2887254899964357 0.6203715150305281 + + E[KP]{I|L}KYER{I|L};E[KP]{I|L}KY{I|L}{[RE]|[WV]};E[KP]{I|L}K{I|L}Y{[RE]|[WV]};E[KP]{I|L}[Y{I|L}]K{[RE]|[WV]} 4.1886;3.3048;2.7593;0.99964 +;-;-;- + 126 + 1 1.891 79317.1 1.0 2162 3323 5485 DOHH2_400M_050219_2,5487 DOHH2_400M_050219_2,5487,EPKLKYERL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5488 28.78 75.0 1275200.0 25 0 74966.0 + 6340 DVLKKAHEL 9 116 351.54169612280214 1051.6032589686065 3 351.5414001345634 MULTI CID FTMS 0 0 0 5485 768443.6875 0.7399607038591574 -1 0.0716571807861328 3 Unmodified _DVLKKAHEL_ ENSG00000185339|ENST00000215838|TCN2;ENST00000471659.1_1_22:31011695-31013483:+|nuORF;ENST00000493542.1_1_22:31011707-31019156:+|nuORF;nc|ENSG00000185339|P20062-2|TCN2 39.94969957227396 0.0757326808254658 2 DV{I|L}{M(Oxidation (M))|F}K 5 5 59.966 0.0 0.0 5.7023 0.0 0.0 0.0 446.2524062350317 446.2524062350317 41.09189699011424 0.0 0.0 0.0 0 0.2302046884880938 2.0 0.0 0.9247425010840048 DV{I|L}{M(Oxidation (M))|F}K 5.7023 - 328 + 1 1.891 80388.6 1.0 2163 3323 5485 DOHH2_400M_050219_2,5488 DOHH2_400M_050219_2,5488,DVLKKAHEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5489 28.783 119.0 460430.0 25 0 45273.0 + 22910 LSDKNIEQY 9 89 555.2781311566227 1108.5417093800454 2 555.2768432497978 MULTI CID FTMS 0 0 0 5485 395560.71875 0.5449743648208637 -1 0.0716571807861328 4 Unmodified _LSDKNIEQY_ ENSG00000122068|ENST00000241502|FYTTD1;nc|ENSG00000122068|Q96QD9-2|FYTTD1;nc|ENSG00000122068|Q96QD9-3|FYTTD1 69.10491478415734 0.0214449631113747 2 [AG][WR]S{I|L}EQY 9 5 + 38.733 0.0 0.0 3.4941 3.4941 68.294 0.0 0.0 0.0 8.03705354856032 10.523787536356584 8.03705354856032 1.2763625255165325 0 0.7429928190999391 1.3010299956639813 0.5796896906561032 0.5796896906561032 [AG][WR]S{I|L}EQY;[AG][WR]SE{I|L}QY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}EQY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[QV]|[N{I|L}]|[RA]|[KV]}SE{I|L}QY;{[QD]|[EN]|[WG]|[KD]|[RS]}RRDEQY;[{I|L}T]QQS{I|L}EQY;[AG][WR]SEQ{I|L}Y;[{I|L}T]QQSE{I|L}QY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[TV]|[{I|L}S]}N{I|L}EQY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[TV]|[{I|L}S]}NE{I|L}QY 3.4941;3.3789;2.7691;2.6539;2.5661;2.5579;2.5447;2.4427;2.3386;2.2235 -;-;-;-;-;-;-;-;-;- 368 1 1.891 50196.4 1.0 2164 3323 5485 DOHH2_400M_050219_2,5489 DOHH2_400M_050219_2,5489,LSDKNIEQY True True LSDKNIEQY 28.782645 555.276843249798 3935320.75 5485.0 nc|ENSG00000122068|Q96QD9-2|FYTTD1;;ENSG00000122068|ENST00000241502|FYTTD1;;nc|ENSG00000122068|Q96QD9-3|FYTTD1 5.248785813649495 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5490 28.786 195.0 511010.0 25 0 44939.0 + 6328 DVKAKLHEL 9 106 526.8088549326557 1051.6031569321112 2 526.8088867068291 MULTI CID FTMS 0 0 0 5485 387510.0625 0.7738928533225291 -1 0.0716571807861328 5 Unmodified _DVKAKLHEL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 84.5221896805406 0.0164210731287474 2 DVKAK{I|L}HE{I|L} 9 0 + 105.57 0.0 0.0 10.039 10.039 99.123 0.0 0.0 0.0 58.089023095914186 24.749774129711422 24.749774129711422 42.99803764475705 0 1.8169015600442573 2.0 1.1549471895720984 0.4247425010840047 + + DVKAK{I|L}HE{I|L};{I|L}[QT]AK{I|L}HE{I|L};[DV]KA{I|L}KHE{I|L};DVKAK{I|L}[NP][PA];{I|L}D[KG]K{I|L}HE{I|L};D{I|L}[KG]K{I|L}HE{I|L};[DV][KA]PKA[NP]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DA{I|L}KHE{I|L};[VS][NP]{I|L}KA[NP]{I|L};{[QN]|[E{I|L}]|[KN]}HKAKVD{I|L} 10.039;5.9501;5.7517;5.6107;5.4073;5.3315;4.121;4.0189;3.7548;3.6369 +;-;-;-;-;-;-;-;-;- + 902 + 1 1.891 83659.6 1.0 2165 3323 5485 DOHH2_400M_050219_2,5490 DOHH2_400M_050219_2,5490,DVKAKLHEL True True DVKAKLHEL 28.786391 526.808886706829 7081700.75 5485.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 5.421229441960652 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5491 28.79 203.0 607000.0 25 0 67082.0 + 468 AEFVEVTK 8 114 461.7479322295543 921.4813115259086 2 461.7475158572197 MULTI CID FTMS 0 0 0 5485 270782.4375 0.173601201182815 -3 0.2051258087158203 6 Unmodified _AEFVEVTK_ CON__P02769 38.17557092003332 0.2648138137323925 2 {[CP]|[EA]}{M(Oxidation (M))|F}VEVTK 8 0 + 51.732 0.0 0.0 5.614 5.614 81.975 0.0 0.0 0.0 34.49600975727897 14.46440244762421 14.46440244762421 6.262874945799766 0 0.75 0.0 0.6307196863200843 0.1549471895720985 + + {[CP]|[EA]}{M(Oxidation (M))|F}VEVTK;{[CP]|[EA]}{M(Oxidation (M))|F}{I|L}DVTK;{[CP]|[EA]}{M(Oxidation (M))|F}VE[KS]{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}{I|L}D[KS]{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}V{[QV]|[N{I|L}]|[RA]|[KV]}{[ET]|[MV]} 5.614;4.9343;3.0795;2.3999;2.2791 +;-;-;-;- + 235 + 1 1.891 98793.8 1.0 2166 3323 5485 DOHH2_400M_050219_2,5491 DOHH2_400M_050219_2,5491,AEFVEVTK False True AEFVEVTK 28.790253 461.74751585722 17725206.0 5485.0 P02769 6.528878688812256 2.0 True 8.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 5492 28.797 366.0 418260.0 25 0 48620.0 + 8133 EPKLKYERL 9 101 588.3422158428499 1174.6698787524997 2 588.3411132693291 MULTI CID FTMS 0 0 0 5485 184114.578125 0.7617543165773885 -1 0.0716571807861328 7 Unmodified _EPKLKYERL_ ENSG00000006715|ENST00000310301|VPS41;nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41 42.312485326615175 0.0627620958981271 2 EPK{I|L}KYE{I|L}R 9 2 + 65.645 0.0 0.0 5.5884 5.5884 81.671 0.0 0.0 0.0 26.522044440423898 6.052207222934385 6.052207222934385 6.052207222934385 0 0.3252574989159953 1.154901959985743 0.0 0.2742275032520141 EPK{I|L}KYE{I|L}R;EPK{I|L}K{I|L}REY;EPK{I|L}KY{I|L}ER;EPK{I|L}K{I|L}YER;EPK{I|L}{I|L}KREY;EPK{I|L}K{I|L}[VG]EY;EPK{I|L}{I|L}YKER;EPK{I|L}{I|L}Y[SG]{I|L}R;EPK{I|L}{I|L}KYER;EPK{I|L}KY[DV]A{I|L} 5.5884;5.0732;4.8424;4.5862;4.5606;4.2893;4.2235;4.1856;4.0736;3.8234 -;-;-;-;-;-;-;-;-;- 410 + 1 1.891 118380.5 1.0 2167 3323 5485 DOHH2_400M_050219_2,5492 DOHH2_400M_050219_2,5492,EPKLKYERL True True EPKLKYERL 28.796858 588.341113269329 8627796.5 5485.0 nc|ENSG00000006715|P49754-3|VPS41;;nc|ENSG00000006715|P49754-2|VPS41;;ENSG00000006715|ENST00000310301|VPS41 6.341019630432129 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5493 28.803 357.0 325390.0 25 0 52697.0 + 557 AEIGRNYSM 9 111 520.745820954463 1039.477088975726 2 520.7454101443291 MULTI CID FTMS 0 0 0 5485 160795.109375 1.0 0 0.0 8 Unmodified _AEIGRNYSM_ ENSG00000033800|ENST00000249636|PIAS1;nc|ENSG00000033800|O75925-2|PIAS1;nc|ENSG00000033800|O75925-3|PIAS1 29.84058131909904 0.1515068451768857 2 {NN|[MP]|[D{I|L}]|[EV]}[WY]{I|L}{[CP]|[EA]}M 8 7 + 26.721 0.0 0.0 2.5706 2.5706 66.531 0.0 0.0 0.0 2.340351382425034 10.290456128172009 2.340351382425034 1.4916623986031396 0 0.0 1.5228787452803376 0.3252574989159953 0.2887254899964357 {NN|[MP]|[D{I|L}]|[EV]}[WY]{I|L}{[CP]|[EA]}M;{NN|[MP]|[D{I|L}]|[EV]}[WY]VVDM;{[CP]|[EA]}[YR]{[{M(Oxidation (M))|F}H]|[RQ]}SM;{[CP]|[EA]}[YR][KQ]DM;{[TV]|[{I|L}S]}[YR]QQDM;{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}[YR]SM;[VP][WH]{[{M(Oxidation (M))|F}H]|[RQ]}SM;[VP][WH][KQ]DM;[YK]{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}H]|[RQ]}SM;[{I|L}T]{[WT]|[RM]}M[NG]SM 2.5706;2.4271;1.7243;1.5274;1.5096;1.1218;0.84899;0.65214;0.61486;0.59748 -;-;-;-;-;-;-;-;-;- 171 1 1.891 91707.9 1.0 2168 3323 5485 DOHH2_400M_050219_2,5493 DOHH2_400M_050219_2,5493,AEIGRNYSM False True AEIGRNYSM 28.803312 520.745410144329 719939.75 5485.0 nc|ENSG00000033800|O75925-2|PIAS1;;ENSG00000033800|ENST00000249636|PIAS1;;nc|ENSG00000033800|O75925-3|PIAS1 5.122442324956258 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5494 28.812 492.0 278560.0 25 0 16996.0 + 31818 RTAHVILRY 9 125 376.8927061169235 1127.6562889509703 3 376.8927490115166 MULTI CID FTMS 0 0 0 5485 143381.1875 1.0 0 0.0 9 Unmodified _RTAHVILRY_ ENSG00000159461|ENST00000290649|AMFR 21.53697664764585 0.2571576504437394 2 V{I|L}YR{I|L} 5 6 27.255 0.0 0.0 2.417 0.0 0.0 465.2459565530604 0.0 465.2459565530604 0.0 15.03669175573954 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.3054621874040891 V{I|L}YR{I|L} 2.417 - 75 + 1 1.891 118639.4 1.0 2169 3323 5485 DOHH2_400M_050219_2,5494 DOHH2_400M_050219_2,5494,RTAHVILRY False True RTAHVILRY 28.811991 376.892749011517 776656.9375 5485.0 ENSG00000159461|ENST00000290649|AMFR 3.158947467803955 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5495 28.817 264.0 320000.0 25 0 30874.0 + 39797 VERREALDI 9 121 367.5402819603185 1099.5990164811556 3 367.5401794314384 MULTI CID FTMS 0 0 0 5485 107777.4609375 0.8680796592396975 -1 0.0716571807861328 10 Unmodified _VERREALDI_ REV__ENSG00000137502|ENST00000527633|RAB30 20.453626601364224 0.2830276176381075 2 N{NN|[MP]|[D{I|L}]|[EV]}{I|L} 4 -1 22.237 0.0 0.0 2.0223 0.0 0.0 626.3511219709 0.0 626.3511219709 0.0 12.055998658692886 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.7302046884880937 N{NN|[MP]|[D{I|L}]|[EV]}{I|L} 2.0223 - 64 1 1.891 69657.7 1.0 2170 3323 5485 DOHH2_400M_050219_2,5495 DOHH2_400M_050219_2,5495,VERREALDI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5497 28.823 79.0 1000400.0 25 0 208150.0 + 32989 SENDTYFKKY 10 74 432.203553129992 1293.588829990176 3 432.2035095095634 MULTI CID FTMS 0 0 0 5496 581362.9375 0.4266103130665534 2 -0.143716812133789 1 Unmodified _SENDTYFKKY_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 13.042465956692816 0.6287021003332052 2 Y{M(Oxidation (M))|F}KKY 5 5 16.084 0.0 0.0 1.2433 0.0 0.0 546.1894292106823 0.0 546.1894292106823 0.0 12.10419287835574 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y{M(Oxidation (M))|F}KKY 1.2433 + + 43 + 1 1.903 69641.5 1.0 2171 3324 5496 DOHH2_400M_050219_2,5497 DOHH2_400M_050219_2,5497,SENDTYFKKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5498 28.836 800.0 184110.0 25 0 26405.0 + 7031 EELDPESREY 10 137 633.7782452272635 1265.5419375213269 2 633.7776977419853 MULTI CID FTMS 0 0 0 5496 131754.796875 0.2075904383858954 3 -0.1923160552978515 2 Unmodified _EELDPESREY_ ENSG00000183617|ENST00000330133|MRPL54 59.36838082759317 0.0382430275470746 2 EE{I|L}DPES{[RE]|[WV]}Y 10 0 + 66.974 0.0 0.0 5.2921 5.2921 75.356 0.0 0.0 0.0 7.5259714591125615 1.7613823547116283 1.7613823547116283 1.7613823547116283 0 0.8494850021680094 1.6989700043360187 0.7302046884880937 0.3252574989159953 + + EE{I|L}DPES{[RE]|[WV]}Y;EE{I|L}DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EQ{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}HTSEPD{I|L}[HC];EE{I|L}DY{[HG]|PP}EQ{M(Oxidation (M))|F};EE{I|L}DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[PS]Y;{NN|[MP]|[D{I|L}]|[EV]}HG{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}[HC];EE{I|L}DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[AG]{M(Oxidation (M))|F};EE{I|L}DPES[HD][VP];EE{I|L}DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DAA{M(Oxidation (M))|F};EE{I|L}DPES[HV][DP] 5.2921;5.1529;4.6974;4.3265;4.274;4.1708;3.9436;3.8741;3.7419;3.6554 +;-;-;-;-;-;-;-;-;- + 982 + 1 1.903 113374.5 0.9399999976158142 2172 3324 5496 DOHH2_400M_050219_2,5498 DOHH2_400M_050219_2,5498,EELDPESREY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5500 28.842 176.0 509430.0 25 0 65452.0 + 388 AEDMETKIKNY 11 120 447.883398410314 1340.628365831142 3 447.8832275271416 MULTI CID FTMS 0 0 0 5499 229619.359375 0.6625885539614444 1 -0.1242141723632812 1 Unmodified _AEDMETKIKNY_ ENSG00000126267|ENST00000649813|COX6B1 63.22749603027936 0.0560465731344335 2 DMETK{I|L}KNY 9 2 65.817 0.0 0.0 4.9094 0.0 0.0 200.08550679723936 0.0 200.08550679723936 0.0 38.944546568983526 0.0 0.0 0 0.2887254899964357 0.0 0.4247425010840047 1.1549471895720984 + DMETK{I|L}KNY 4.9094 + + 261 + 1 1.903 77016.6 1.0 2173 3325 5499 DOHH2_400M_050219_2,5500 DOHH2_400M_050219_2,5500,AEDMETKIKNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5501 28.845 116.0 435300.0 25 0 23987.0 + 26380 NTDDTIGDLK 10 82 546.2648429509485 1090.515132968697 2 546.2640869021416 MULTI CID FTMS 0 0 0 5499 273812.4375 0.4528120346944432 -1 0.0195026397705078 2 Unmodified _NTDDTIGDLK_ ENSG00000198258|ENST00000586895|UBL5;ENST00000589372.1_1_19:9939013-9939570:+|nuORF 44.391923383255 0.1130657680819667 2 NTDDT{I|L}GD{I|L}K 10 0 + 95.104 0.0 0.0 8.721 8.721 97.768 0.0 0.0 0.0 83.11458741364027 14.96115281262766 14.96115281262766 29.719712763997563 0 0.3807196863200844 2.0 0.4247425010840047 0.1923877696554315 + + NTDDT{I|L}GD{I|L}K;NTEE[VS]GD{I|L}K;NTD[KS][WM][{I|L}P] 8.721;5.9958;3.777 +;-;- + 135 + 1 1.903 52263.6 1.0 2174 3325 5499 DOHH2_400M_050219_2,5501 DOHH2_400M_050219_2,5501,NTDDTIGDLK True True NTDDTIGDLK 28.844776 546.264086902142 6648979.0 5499.0 ENST00000589372.1_1_19:9939013-9939570:+|nuORF;;ENSG00000198258|ENST00000586895|UBL5;;UBL5|p.R15P|1|0.13|ENSG00000198258|chr19:9828381-9828381|G/C|missense_variant 7.809164206186931 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5502 28.846 23.0 1496700.0 25 0 253850.0 -1 0 46 414.2567940667145 413.2495176001145 1 414.2583801150322 MULTI CID FTMS 0 0 0 5499 3992902.25 1.0 0 0.0 3 2 A 1 -1 6.9897 0.0 0.0 1.6914 0.0 0.0 257.1231728508942 82.06672083072499 339.1898936816192 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.6914 - 4 + 1 1.903 33430.5 1.0 2175 3325 5499 DOHH2_400M_050219_2,5502 DOHH2_400M_050219_2,5502, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5503 28.848 90.0 296680.0 25 0 19026.0 -1 KFAMFITL 8 68 493.7723915222619 0 493.7724182009697 PEAK CID FTMS 0 0 0 5499 882195.375 1.0 0 0.0 4 Oxidation (M) _KFAM(Oxidation (M))FITL_ ENSG00000170522|ENST00000302274|ELOVL6 24.67388899826682 0.3296343502680589 2 N{M(Oxidation (M))|F} 2 -1 18.711 0.0 0.0 1.8986 0.0 0.0 232.14498948808009 489.2698153131469 721.414804801227 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 N{M(Oxidation (M))|F} 1.8986 - 18 + 1 1.903 29630.9 1.0 2176 3325 5499 DOHH2_400M_050219_2,5503 DOHH2_400M_050219_2,5503,KFAMFITL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5504 28.85 93.0 337840.0 25 0 27733.0 29531 QLMQLLLKR 9 57 381.57424524405246 1141.7009063323574 3 381.5739013552666 MULTI CID FTMS 0 0 0 5499 826571.25 1.0 0 0.0 5 Unmodified _QLMQLLLKR_ ENST00000460547.6_1_6:43483667-43483721:-|nuORF 1.0714618166137932 0.8772799748779447 2 A 1 9 2.4743 0.0 0.0 0.21672 0.0 0.0 760.5045695177074 307.13337122135005 1067.6379407390575 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.21672 - 1 + 1 1.903 32472.8 1.0 2177 3325 5499 DOHH2_400M_050219_2,5504 DOHH2_400M_050219_2,5504,QLMQLLLKR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5505 28.855 274.0 205840.0 25 0 18951.0 + 23429 LTEQYNEQY 9 106 594.2642903320569 1186.5140277309138 2 594.2648803591728 MULTI CID FTMS 0 0 0 5499 409168.65625 1.0 0 0.0 6 Unmodified _LTEQYNEQY_ ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 20.453626601364224 0.2830276176381075 2 [AG]Y[PS]C(Carbamidomethyl (C))E{I|L}[YQ] 10 7 + 27.469 0.0 0.0 2.3151 2.3151 68.433 0.0 0.0 0.0 3.098039199714858 7.269987279362624 3.098039199714858 3.098039199714858 0 0.0 1.154901959985743 0.4247425010840047 0.0 [AG]Y[PS]C(Carbamidomethyl (C))E{I|L}[YQ];[YE]DD{I|L}E{I|L}[YQ];[YQ][PS]C(Carbamidomethyl (C))E{I|L}[YQ];[AG]Y[PS][CG]E{I|L}[YQ];[YQ][PS][CG]E{I|L}[YQ];[{M(Oxidation (M))|F}V][QT]C(Carbamidomethyl (C))E{I|L}[YQ];[NP][YT]C(Carbamidomethyl (C))E{I|L}[YQ];[{M(Oxidation (M))|F}V][QT][CG]E{I|L}[YQ];[NP][YT][CG]E{I|L}[YQ] 2.3151;2.054;1.9056;1.5427;1.1295;1.0279;0.91435;0.25181;0.13828 -;-;-;-;-;-;-;-;- 160 1 1.903 46768.1 1.0 2178 3325 5499 DOHH2_400M_050219_2,5505 DOHH2_400M_050219_2,5505,LTEQYNEQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5506 28.858 163.0 267520.0 25 0 50898.0 25680 NGSLIHVET 9 66 485.25374207846966 968.4929312237392 2 485.2538024783134 MULTI CID FTMS 0 0 0 5499 345411.25 1.0 0 0.0 7 Unmodified _NGSLIHVET_ ENST00000434453.1_1_7:156616573-156629563:-|nuORF 15.847184025352805 0.4077185912009129 2 A[HC] 3 8 14.705 0.0 0.0 1.5183 0.0 0.0 639.3686390607437 0.0 639.3686390607437 0.0 14.704999916446797 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 A[HC] 1.5183 - 3 1 1.903 42919.6 1.0 2179 3325 5499 DOHH2_400M_050219_2,5506 DOHH2_400M_050219_2,5506,NGSLIHVET False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5507 28.864 293.0 363200.0 25 0 27764.0 + 40816 VLLTKKSL 8 95 451.30765676452535 900.6007605958507 2 451.3074523806572 MULTI CID FTMS 0 0 0 5499 192920.5625 1.0 0 0.0 8 Unmodified _VLLTKKSL_ ENSG00000169710|ENST00000306749|FASN 41.8396318013385 0.2035142800366642 2 V{I|L}{I|L}TKKS{I|L} 8 0 + 74.228 0.0 0.0 8.2421 8.2421 98.402 0.0 0.0 0.0 55.05469490879243 10.639947021295852 10.639947021295852 74.2282771272211 0 0.5629529932484498 2.0 1.079689690656103 0.0 + + V{I|L}{I|L}TKKS{I|L} 8.2421 + + 206 + 1 1.903 88099.8 1.0 2180 3325 5499 DOHH2_400M_050219_2,5507 DOHH2_400M_050219_2,5507,VLLTKKSL False True VLLTKKSL 28.863585 451.307452380657 1044369.375 5499.0 ENSG00000169710|ENST00000306749|FASN 2.7252214749654136 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5508 28.867 203.0 293650.0 25 0 34375.0 + 384 AEDKSWRVRY 10 71 437.2269576653458 1308.6590435962376 3 437.2257568240166 MULTI CID FTMS 0 0 0 5499 165475.390625 0.7340688838123027 1 -0.1242141723632812 9 Unmodified _AEDKSWRVRY_ ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 21.799462835604743 0.4789045305445478 2 AEDK 4 6 63.8 0.0 0.0 4.8752 0.0 0.0 0.0 862.4314697040608 862.4314697040608 49.53524722859527 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.3807196863200844 + AEDK 4.8752 + + 37 + 1 1.903 53787.9 1.0 2181 3325 5499 DOHH2_400M_050219_2,5508 DOHH2_400M_050219_2,5508,AEDKSWRVRY False True AEDKSWRVRY 28.867445 437.225756824017 1219216.75 5499.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 4.871689955393474 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5509 28.875 424.0 190780.0 25 0 18610.0 + -1 EEPMKRSVQF 10 103 633.8106751833446 0 633.8109008669853 PEAK CID FTMS 0 0 0 5499 157256.1875 1.0 0 0.0 10 Oxidation (M) _EEPM(Oxidation (M))KRSVQF_ REV__ENST00000531699.5_1_17:42786295-42807277:+|nuORF 25.399314129420983 0.2547831343944559 2 {I|L}DPE{I|L}{M(Oxidation (M))|F}Q 7 -1 36.547 0.0 0.0 2.8877 0.0 0.0 258.15637126337043 162.05611597232658 420.212487235697 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3494850021680094 {I|L}DPE{I|L}{M(Oxidation (M))|F}Q 2.8877 - 187 + 1 1.903 67002.9 1.0 2182 3325 5499 DOHH2_400M_050219_2,5509 DOHH2_400M_050219_2,5509,EEPMKRSVQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5510 28.889 800.0 116020.0 25 0 5805.3 + + -1 KDSTAWMEQFYQ 12 106 775.3363525271416 0 775.3363525271416 PEAK CID FTMS 0 0 0 -1 0 11 2 Carbamidomethyl (C),2 Oxidation (M) _C(Carbamidomethyl (C))RNIM(Oxidation (M))C(Carbamidomethyl (C))LEKM(Oxidation (M))Y_ nc|ENSG00000171804|Q6ZQQ6|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;ENSG00000171804|ENST00000447313|WDR87 2.735195868890462 0.4761840153648598 2 {M(Oxidation (M))|F}ADQ[WH]{M(Oxidation (M))|F}Y 8 -1 27.93 0.0 0.0 1.8035 0.0 0.0 308.1463325045575 143.04610620670158 451.1924387112591 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7614393726401688 0.0 {M(Oxidation (M))|F}ADQ[WH]{M(Oxidation (M))|F}Y 1.8035 - 452 + 1 1.903 64879.3 0.7300000190734863 2183 3325 5499 DOHH2_400M_050219_2,5510 DOHH2_400M_050219_2,5510,CRNIMCLEKMY False False KDSTAWMEQFYQ 28.888863 775.336352527142 32585636.0 5499.0 nc|ENSG00000171804|Q6ZQQ6|WDR87;;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;;ENSG00000171804|ENST00000447313|WDR87 3.169921855131785 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5511 28.903 800.0 59798.0 25 0 11981.0 34987 SQLSYYYMGF 10 94 629.7755004763603 0 629.7755004763603 PEAK CID FTMS 0 0 0 -1 0 12 Unmodified _SQLSYYYMGF_ ENSG00000107669|ENST00000224652|ATE1;nc|ENSG00000107669|O95260-2|ATE1 5.731851221503515 0.3961065659209837 2 QQ 2 9 5.9691 0.0 0.0 0.47467 0.0 0.0 350.1586527326186 648.2327974908811 998.3914502234998 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QQ 0.47467 - 17 + 1 1.903 40447.7 0.7300000190734863 2184 3325 5499 DOHH2_400M_050219_2,5511 DOHH2_400M_050219_2,5511,SQLSYYYMGF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5512 28.909 365.0 238850.0 25 0 21350.0 + 4738 DEFGDSRRRW 10 95 441.877219283558 1322.609828450874 3 441.8772765994072 MULTI CID FTMS 0 0 0 5499 144072.3125 0.8972092950390527 1 -0.1242141723632812 13 Unmodified _DEFGDSRRRW_ ENST00000375457.2_2_13:113862417-113862534:-|nuORF 19.986897341741983 0.5121812865880797 2 DE{M(Oxidation (M))|F}GD[K{I|L}][KA]DW 11 5 + 63.363 0.0 0.0 4.7908 4.7908 75.022 0.0 0.0 0.0 52.39416224278422 1.6706558327710042 1.6706558327710042 3.0102999566398125 0 0.8494850021680094 2.0 0.5 0.9247425010840048 DE{M(Oxidation (M))|F}GD[K{I|L}][KA]DW;DE{M(Oxidation (M))|F}VD[KA][KA]DW;DE{M(Oxidation (M))|F}GD[K{I|L}][WK]W;DE{M(Oxidation (M))|F}V[WK][KA]DW;DE{M(Oxidation (M))|F}VD[KA][WK]W;DE{M(Oxidation (M))|F}VD[Y{I|L}][KT]{[HG]|PP};DE{M(Oxidation (M))|F}V[WK][WK]W;DE{M(Oxidation (M))|F}G{M(Oxidation (M))|F}[W{I|L}]{[QN]|[E{I|L}]|[KN]}[PA];{[ES]|[DT]|[{I|L}C]}[{I|L}V][W{I|L}]{M(Oxidation (M))|F}EWD;{[CT]|[{M(Oxidation (M))|F}G]}[WK][K{I|L}]DEWD 4.7908;4.5632;4.4277;4.2936;4.2001;4.1658;3.9338;3.2627;1.4087;0.95202 -;-;-;-;-;-;-;-;-;- 293 + 1 1.903 76612.6 1.0 2185 3325 5499 DOHH2_400M_050219_2,5512 DOHH2_400M_050219_2,5512,DEFGDSRRRW False True DEFGDSRRRW 28.909265 441.877276599407 1199158.0 5499.0 ENST00000375457.2_2_13:113862417-113862534:-|nuORF 5.123189608256022 3.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5513 28.916 313.0 263590.0 25 0 22839.0 -1 HLLQPCLVL 9 103 364.877627156526 0 364.8890563845634 PEAK CID FTMS 0 0 0 5499 4377.4990234375 0.2341374672055161 -5 0.2759246826171875 14 Carbamidomethyl (C) _HLLQPC(Carbamidomethyl (C))LVL_ ENSG00000135763|ENST00000258243|URB2 9.38312468134398 0.3193474221348066 2 H 1 -1 3.4949 0.0 0.0 0.48023 0.0 0.0 505.5927959616864 82.06674371890858 587.6595396805949 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.48023 + + 6 + 1 1.903 72176.4 1.0 2186 3325 5499 DOHH2_400M_050219_2,5513 DOHH2_400M_050219_2,5513,HLLQPCLVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5514 28.925 490.0 182490.0 25 0 25475.0 28249 PQSEQPQQPQ 10 109 583.7778718796637 1165.5411908261274 2 584.2807494997978 MULTI CID FTMS 0 0 0 5499 113659.609375 1.0 0 0.0 15 Unmodified _PQSEQPQQPQ_ ENSG00000147571|ENST00000276571|CRH 10.073929032068715 0.6785112666868882 2 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[NG]{M(Oxidation (M))|F}AHA 9 9 28.311 0.0 0.0 2.429 0.0 0.0 0.0 176.06048499404213 176.06048499404213 4.855312426617576 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.1989700043360188 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[NG]{M(Oxidation (M))|F}AHA 2.429 - 342 1 1.903 72265.3 1.0 2187 3325 5499 DOHH2_400M_050219_2,5514 DOHH2_400M_050219_2,5514,PQSEQPQQPQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5515 28.928 156.0 413390.0 25 0 50071.0 + 43263 WFALNALLS 9 96 517.786832249359 0 517.7867919802666 PEAK CID FTMS 0 0 0 5499 689233.125 1.0 0 0.0 16 Unmodified _WFALNALLS_ REV__ENSG00000170775|ENST00000303921|GPR37 7.910154910731844 0.3362437653303669 2 YK{M(Oxidation (M))|F} 3 -1 16.727 0.0 0.0 1.6184 0.0 0.0 226.14811410633664 366.1785067193969 592.3266208257336 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 YK{M(Oxidation (M))|F} 1.6184 - 39 + 1 1.903 55466.5 1.0 2188 3325 5499 DOHH2_400M_050219_2,5515 DOHH2_400M_050219_2,5515,WFALNALLS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5516 28.937 529.0 155940.0 25 0 37226.0 -1 ETEGPDMKEK 10 105 590.2652392251784 0 590.2643920779228 PEAK CID FTMS 0 0 0 -1 0 17 Oxidation (M) _ETEGPDM(Oxidation (M))KEK_ ENSG00000278685|ENST00000615129|IQCA1L 17.11289562659939 0.3208555510962471 2 AADV 4 -1 23.73 0.0 0.0 2.0135 0.0 0.0 275.1408777650068 544.1787813775999 819.3196591426067 0.0 0.0 0.0 0.0 0 1.1307196863200843 0.0 0.0 0.0 AADV 2.0135 - 34 + 1 1.903 68773.9 1.0 2189 3325 5499 DOHH2_400M_050219_2,5516 DOHH2_400M_050219_2,5516,ETEGPDMKEK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5517 28.942 261.0 244050.0 25 0 42226.0 7240 EESDTLNRP 9 97 530.7512257315492 1059.4878985298983 2 532.2634155154228 MULTI CID FTMS 0 0 0 5499 118896.546875 1.0 0 0.0 18 Unmodified _EESDTLNRP_ L1PB1_dup6616|chr8:82292382-82293007:-|1.773853938787453|0.0196351871970747|6.5|48.0|14|2|sense 12.531546534597751 0.4974689918368763 2 Y 1 9 16.99 0.0 0.0 1.6036 0.0 0.0 878.4138609095843 0.0 878.4138609095843 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.6036 - 63 + 1 1.903 55646.3 1.0 2190 3325 5499 DOHH2_400M_050219_2,5517 DOHH2_400M_050219_2,5517,EESDTLNRP False False False False ERV PXD020620_cell_line DOHH2_400M_050219_2 5518 28.947 183.0 373390.0 25 0 118570.0 37514 TLGTEAGHFA 10 76 502.2477847692885 0 502.2507812380791 PEAK CID FTMS 0 0 0 5499 104725.015625 1.0 0 0.0 19 Unmodified _TLGTEAGHFA_ ENSG00000177943|ENST00000317446|MAMDC4;nc|ENSG00000177943|Q6UXC1|MAMDC4 3.944395688203298 0.3961065659209837 2 P 1 10 6.9897 0.0 0.0 0.69724 0.0 0.0 501.2062140776697 401.2035006158813 902.409714693551 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.69724 - 11 + 1 1.903 60084.7 1.0 2191 3325 5499 DOHH2_400M_050219_2,5518 DOHH2_400M_050219_2,5518,TLGTEAGHFA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5519 28.961 800.0 138130.0 25 0 7289.8 + 389 AEDMETKIKNY 11 143 671.3210094722956 1340.627466011391 2 671.3193847537041 MULTI CID FTMS 0 0 0 5499 100513.921875 0.8913126717006202 1 -0.1242141723632812 20 Unmodified _AEDMETKIKNY_ ENSG00000126267|ENST00000649813|COX6B1 118.81303886336303 0.0367882507415963 2 {[CP]|[EA]}DMETK{I|L}KNY 11 0 + 95.154 0.0 0.0 7.0977 7.0977 91.887 0.0 0.0 0.0 8.164952322970038 8.164952322970038 8.164952322970038 9.57280713621401 0 3.555462187404089 0.721246399047171 0.2614393726401688 1.0501648626366045 + + {[CP]|[EA]}DMETK{I|L}KNY;{[CP]|[EA]}DME{I|L}[KT]KNY;{[CP]|[EA]}DMETK{I|L}KGGY;{[CP]|[EA]}DME{I|L}[KT]KGGY;[MD]EAETK{I|L}KNY;{[CP]|[EA]}DM{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{I|L}KNY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AMETK{I|L}KNY;[MD]EAETK{I|L}KGGY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AMETK{I|L}KGGY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MAETK{I|L}KNY 7.0977;6.3837;6.1328;5.4188;5.3424;5.3124;5.2809;4.6615;4.6;4.5242 +;-;-;-;-;-;-;-;-;- + 1021 + 1 1.903 80965.4 0.5400000214576721 2192 3325 5499 DOHH2_400M_050219_2,5519 DOHH2_400M_050219_2,5519,AEDMETKIKNY True True AEDMETKIKNY 28.960596 671.319384753704 2852804.5 5499.0 ENSG00000126267|ENST00000649813|COX6B1 8.113017717997232 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5521 28.968 152.0 304360.0 25 0 25476.0 + 8594 ETWAMRPW 8 78 538.7542254045377 1075.4938978758753 2 538.7539550662041 MULTI CID FTMS 0 0 0 5520 171141.40625 0.6449828653101969 3 -0.0972766876220703 1 Unmodified _ETWAMRPW_ REV__ENST00000552221.1_1_12:108941677-108954930:-|nuORF 12.531546534597751 0.7257836412119636 2 AW 2 -1 23.201 0.0 0.0 2.1572 0.0 0.0 800.3655873029312 0.0 800.3655873029312 0.0 8.496075289514094 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.0 AW 2.1572 - 37 1 1.92 42754.8 1.0 2193 3326 5520 DOHH2_400M_050219_2,5521 DOHH2_400M_050219_2,5521,ETWAMRPW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5522 28.981 800.0 144430.0 25 0 7237.0 + 4270 DAQDQRVAQPH 11 159 422.207649309353 1263.601118528259 3 422.2067443728447 MULTI CID FTMS 0 0 0 5520 15760.435546875 0.0526486818045538 3 -0.0972766876220703 2 Unmodified _DAQDQRVAQPH_ REV__ENST00000525281.5_1_10:4887971-4888256:+|nuORF 4.897010918128616 0.8520435188433833 2 {[DA]|[EG]}M 3 -1 25.731 0.0 0.0 2.0363 0.0 0.0 0.0 943.4750582569676 943.4750582569676 10.24613421077092 0.0 0.0 0.0 0 0.3054621874040891 1.2218487496163564 0.0 0.0 {[DA]|[EG]}M 2.0363 - 137 + 1 1.92 94770.9 0.4699999988079071 2194 3326 5520 DOHH2_400M_050219_2,5522 DOHH2_400M_050219_2,5522,DAQDQRVAQPH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5523 28.984 154.0 564840.0 25 0 40708.0 + 3150 AVRPKVLM 8 97 457.2864781671036 912.5584034010072 2 457.2863036990166 MULTI CID FTMS 0 0 0 5520 343974.40625 1.0 0 0.0 3 Unmodified _AVRPKVLM_ ENSG00000109475|ENST00000394667|RPL34;ENST00000503574.1_1_4:109543664-109543775:+|nuORF 38.15118350030904 0.2652218139009398 2 {[VA]|[{I|L}G]}R[KP]V{I|L}M 8 0 + 48.109 0.0 0.0 5.2719 5.2719 86.18 0.0 0.0 0.0 14.208187539523747 29.69273760456403 14.208187539523747 11.020599913279623 0 1.3494850021680094 1.2218487496163564 0.0 0.0 + + {[VA]|[{I|L}G]}R[KP]V{I|L}M;{[VA]|[{I|L}G]}R[KP]{I|L}VM;[KP]V{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}M;[KP]V[R{I|L}]G{I|L}M;[KP]V{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VM;[KP]V[R{I|L}]AVM;{[VA]|[{I|L}G]}[VS]T{I|L}K[VP] 5.2719;4.0642;3.1139;2.4542;1.9063;1.2465;0.21366 +;-;-;-;-;-;- + 259 1 1.92 70213.1 1.0 2195 3326 5520 DOHH2_400M_050219_2,5523 DOHH2_400M_050219_2,5523,AVRPKVLM False True AVRPKVLM 28.984369 457.286303699017 1867205.75 5520.0 ENSG00000109475|ENST00000394667|RPL34;;ENST00000503574.1_1_4:109543664-109543775:+|nuORF 4.166024525960286 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5524 28.987 128.0 458240.0 25 0 50057.0 + 12295 GSDKINYTY 9 91 530.7510215828529 1059.4874902325057 2 530.7510253787041 MULTI CID FTMS 0 0 0 5520 342644.25 0.8446203808758924 -2 0.143716812133789 4 Unmodified _GSDKINYTY_ ENSG00000186416|ENST00000688521|NKRF;nc|ENSG00000186416|O15226-2|NKRF;nc|ENSG00000186416|O15226|NKRF 36.506200033944 0.094635877243972 2 [SG]V[SG]{I|L}NYTY 10 3 + 49.21 0.0 0.0 4.6447 4.6447 76.095 0.0 0.0 0.0 5.740312677277188 13.993179960498937 5.740312677277188 4.27028188162717 0 0.5 0.8239087409443188 1.0387254899964358 0.0 [SG]V[SG]{I|L}NYTY;[SG]G[VS]{I|L}NYTY;[SG]A[TA]{I|L}NYTY;{[QD]|[EN]|[WG]|[KD]|[RS]}[SG]{I|L}NYTY;[YT][HK]WYY;[SG]V[SG]{I|L}NTYY;[SG]V[SG]{I|L}GGYTY;[NS][VS]{I|L}NYTY;[TA]A[SG]{I|L}NYTY;{[QS]|[NT]}[TA]{I|L}NYTY 4.6447;4.2416;4.1731;4.1029;3.9358;3.8886;3.7797;3.6998;3.668;3.6313 -;-;-;-;-;-;-;-;-;- 488 1 1.92 50464.5 1.0 2196 3326 5520 DOHH2_400M_050219_2,5524 DOHH2_400M_050219_2,5524,GSDKINYTY True True GSDKINYTY 28.986992 530.751025378704 2287960.5 5520.0 nc|ENSG00000186416|O15226|NKRF;;nc|ENSG00000186416|O15226-2|NKRF;;ENSG00000186416|ENST00000688521|NKRF 7.051032384236653 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5525 28.992 259.0 612370.0 25 0 135720.0 23613 LTPRFNPF 8 99 496.2713304853952 990.5281080375904 2 496.2716552615166 MULTI CID FTMS 0 0 0 5520 280482.40625 0.4052785331320179 -2 0.143716812133789 5 Unmodified _LTPRFNPF_ ENST00000526192.1_1_6:133074642-133078971:-|nuORF 16.942295170755138 0.6606234159769251 2 {I|L}D 2 7 29.83 0.0 0.0 3.0115 0.0 0.0 0.0 759.3937217062958 759.3937217062958 7.698057187113207 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 {I|L}D 3.0115 - 174 + 1 1.92 127391.6 1.0 2197 3326 5520 DOHH2_400M_050219_2,5525 DOHH2_400M_050219_2,5525,LTPRFNPF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5526 28.995 176.0 392200.0 25 0 39800.0 34164 SLMFSLANVL 10 88 365.5364803727037 1093.587611718311 3 365.5373107790947 MULTI CID FTMS 0 0 0 5520 188473.8125 1.0 0 0.0 6 Unmodified _SLMFSLANVL_ ENSG00000125247|ENST00000342624|TMTC4;nc|ENSG00000125247|Q5T4D3-4|TMTC4;nc|ENSG00000125247|Q5T4D3|TMTC4 13.042465956692816 0.6287021003332052 2 V{I|L} 2 8 22.206 0.0 0.0 2.0306 0.0 0.0 863.4255728274136 0.0 863.4255728274136 0.0 10.9471653193118 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + V{I|L} 2.0306 + + 18 1 1.92 62763.4 1.0 2198 3326 5520 DOHH2_400M_050219_2,5526 DOHH2_400M_050219_2,5526,SLMFSLANVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5527 28.999 221.0 347920.0 25 0 54296.0 + + 36360 RSNDGAYSL 9 88 491.7328299485204 981.4511069638407 2 491.7324401736259 MULTI CID FTMS 0 0 0 5520 186349.6875 1.0 0 0.0 7 Unmodified _SYPPSTMSL_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENST00000540175.1_1_12:20704556-20705942:+|nuORF;nc|ENSG00000147854|Q96PU4-2|UHRF2;ENST00000484159.5_1_9:6434093-6493966:+|nuORF;ENSG00000147854|ENST00000276893|UHRF2;nc|ENSG00000276043|Q96T88-2|UHRF1;ENSG00000276043|ENST00000650932|UHRF1 16.942295170755138 0.3780752226737986 2 [{M(Oxidation (M))|F}V]YR 4 -1 29.693 0.0 0.0 3.0254 0.0 0.0 0.0 413.1502474420532 413.1502474420532 3.2390874094431865 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]YR 3.0254 - 91 + 1 1.92 65151.7 1.0 2199 3326 5520 DOHH2_400M_050219_2,5527 DOHH2_400M_050219_2,5527,SYPPSTMSL False False RSNDGAYSL 28.999369 491.732440173626 1163849.25 5520.0 chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;;ENST00000540175.1_1_12:20704556-20705942:+|nuORF;;nc|ENSG00000147854|Q96PU4-2|UHRF2;;ENST00000484159.5_1_9:6434093-6493966:+|nuORF;;ENSG00000147854|ENST00000276893|UHRF2;;nc|ENSG00000276043|Q96T88-2|UHRF1;;ENSG00000276043|ENST00000650932|UHRF1 4.35070538520813 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5528 29.005 294.0 205700.0 25 0 13455.0 + 13079 HEATDSGVAAL 11 105 535.7599370411203 1069.5053211490406 2 535.7589599490166 MULTI CID FTMS 0 0 0 5520 163418.34375 0.2182475232053944 2 -0.0869407653808593 8 Unmodified _HEATDSGVAAL_ REV__ENST00000536896.2_1_1:26145941-26146436:-|nuORF 27.628801355627647 0.4434699450731472 2 [HA]EDT[WK]A{I|L} 9 -1 + 43.452 0.0 0.0 4.0628 4.0628 83.218 0.0 0.0 0.0 31.23335407078948 12.936457164228443 12.936457164228443 18.750612633917 0 1.8252574989159955 0.0 0.3807196863200844 0.0 [HA]EDT[WK]A{I|L};[HA]E[{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L};[KP][YK]TDCC{I|L};[HA]E[{M(Oxidation (M))|F}V]A{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[ET]|[MV]}[YC(Carbamidomethyl (C))][WK]A{I|L};{[ET]|[MV]}[WH][WQ]A{I|L};{[ET]|[MV]}[WH]T{[{M(Oxidation (M))|F}H]|[RQ]}{I|L} 4.0628;2.3096;1.8972;1.396;1.085;0.92034;0.0067169 -;-;-;-;-;-;- 238 + 1 1.92 51383.0 1.0 2200 3326 5520 DOHH2_400M_050219_2,5528 DOHH2_400M_050219_2,5528,HEATDSGVAAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5529 29.009 237.0 272800.0 25 0 34456.0 + 29115 QERPGNFY 8 109 505.7383640104582 1009.4621750877164 2 505.7380554080009 MULTI CID FTMS 0 0 0 5520 112419.9765625 0.8860155871183842 -1 0.1242141723632812 9 Unmodified _QERPGNFY_ ENSG00000155629|ENST00000339364|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1 42.09456458481378 0.1992492688217789 2 [PG]NGA{[RE]|[WV]}{M(Oxidation (M))|F}Y 9 7 + 37.425 0.0 0.0 3.7075 3.7075 75.174 0.0 0.0 0.0 1.267186419914104 28.384315473529192 1.267186419914104 6.47817481888638 0 0.8494850021680094 0.0 0.0 0.8807196863200843 [PG]NGA{[RE]|[WV]}{M(Oxidation (M))|F}Y;[PG]NQ{[RE]|[WV]}{M(Oxidation (M))|F}Y;[PG]GGGA{[RE]|[WV]}{M(Oxidation (M))|F}Y;[PG]GGQ{[RE]|[WV]}{M(Oxidation (M))|F}Y;[TP]{M(Oxidation (M))|F}N[PG]A[SG]Y;[TP]{M(Oxidation (M))|F}N[QP][SG]Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP]{[HG]|PP}{M(Oxidation (M))|F}Y;[DP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[HG]|PP}{M(Oxidation (M))|F}Y 3.7075;3.0657;2.7953;2.1482;2.0175;1.3704;1.0845;0.74525 -;-;-;-;-;-;-;- 207 1 1.92 53399.3 1.0 2201 3326 5520 DOHH2_400M_050219_2,5529 DOHH2_400M_050219_2,5529,QERPGNFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5531 29.014 129.0 542950.0 25 0 70135.0 + 5220 DIYEKQQL 8 101 518.7691445629633 1035.5237361927266 2 518.7692748904228 MULTI CID FTMS 0 0 0 5530 243081.34375 0.9217217014388788 1 -0.0383415222167968 1 Unmodified _DIYEKQQL_ ENSG00000106524|ENST00000306999|ANKMY2 26.88365393820708 0.4786498634179528 2 {NN|[MP]|[D{I|L}]|[EV]}YEKQQ{I|L} 8 0 + 39.976 0.0 0.0 3.8604 3.8604 84.312 0.0 0.0 0.0 27.42275032520141 1.9160613501705936 1.9160613501705936 39.97576767029626 0 0.4247425010840047 2.0 0.0 0.7134679910804405 + + {NN|[MP]|[D{I|L}]|[EV]}YEKQQ{I|L} 3.8604 + + 105 + 1 1.92 60045.7 1.0 2202 3327 5530 DOHH2_400M_050219_2,5531 DOHH2_400M_050219_2,5531,DIYEKQQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5532 29.019 261.0 408070.0 25 0 154440.0 -1 0 88 474.2885973927482 473.2813209261482 1 474.2886840701103 MULTI CID FTMS 0 0 0 5530 200966.125 0.2739426255862943 15 -0.7548599243164062 2 2 [R{I|L}]W 3 -1 [R{I|L}] + + 13.979 1.338 0.49706 2.9537 2.9537 48.775 0.0 0.0 0.0 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 [R{I|L}]W 2.9537 - 50 + 1 1.92 86835.2 1.0 2203 3327 5530 DOHH2_400M_050219_2,5532 DOHH2_400M_050219_2,5532, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5533 29.03 625.0 234950.0 25 0 20622.0 + 7133 EENDKLRQEF 10 157 436.5450730084764 0 436.5455200076103 PEAK CID FTMS 0 0 0 5530 99395.234375 1.0 0 0.0 3 Unmodified _EENDKLRQEF_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 12.227587767072771 0.3579153973943737 2 {I|L} 1 9 6.9897 0.0 0.0 0.80242 0.0 0.0 179.71147062457152 575.2561739557249 754.9676445802963 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.80242 + + 25 + 1 1.92 120707.1 1.0 2204 3327 5530 DOHH2_400M_050219_2,5533 DOHH2_400M_050219_2,5533,EENDKLRQEF False True EENDKLRQEF 29.030119 436.54552000761 772731.25 5530.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 5.634011904398601 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5534 29.044 800.0 139010.0 25 0 12279.0 + + 22733 IGKKQQISL 9 141 507.81908251799325 1013.6236121027864 2 507.8190490603447 MULTI CID FTMS 0 0 0 5530 84817.921875 0.9318021262372131 -2 0.1728134155273437 4 Unmodified _LQKANKLSL_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 36.12702656103203 0.0967173616627612 2 Q{I|L}S{I|L} 4 -1 34.329 0.0 0.0 3.3867 0.0 0.0 554.3560658185562 0.0 554.3560658185562 0.0 17.884869186189356 0.0 0.0 0 0.805462187404089 0.0 0.0 0.4247425010840047 Q{I|L}S{I|L} 3.3867 - 497 1 1.92 88114.8 0.4699999988079071 2205 3327 5530 DOHH2_400M_050219_2,5534 DOHH2_400M_050219_2,5534,LQKANKLSL False False IGKKQQISL 29.043933 507.8188 501008.8125 5530.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 1.5796451568603516 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5535 29.048 186.0 249250.0 25 0 16857.0 -1 ETPCENEFA 9 92 548.7157765516455 1095.417000170091 2 548.7147094607353 MULTI CID FTMS 0 0 0 5530 107827.6953125 1.0 0 0.0 5 Carbamidomethyl (C) _ETPC(Carbamidomethyl (C))ENEFA_ ENSG00000198912|ENST00000361605|C1orf174;ENST00000486765.5_1_1:3806526-3811957:-|nuORF 8.593279151180031 0.6146971463335029 2 Y 1 -1 16.99 0.0 0.0 1.551 0.0 0.0 914.342993067355 0.0 914.342993067355 0.0 7.068174985992782 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.551 - 110 + 1 1.92 44638.8 1.0 2206 3327 5530 DOHH2_400M_050219_2,5535 DOHH2_400M_050219_2,5535,ETPCENEFA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5537 29.053 75.0 892790.0 25 0 113740.0 + 469 AEFVEVTK 8 85 461.7479322295543 921.4813115259086 2 461.7475463747978 MULTI CID FTMS 0 0 0 5536 713467.9375 0.4574110939356087 2 -0.0490531921386718 1 Unmodified _AEFVEVTK_ CON__P02769 38.17557092003332 0.2648138137323925 2 {[CP]|[EA]}{M(Oxidation (M))|F}VEVTK 8 0 + 49.025 0.0 0.0 5.3203 5.3203 80.777 0.0 0.0 0.0 33.646139603043096 12.5190243216651 12.5190243216651 6.262874945799766 0 0.7302046884880937 0.0 0.6139829889124311 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}VEVTK;{[CP]|[EA]}{M(Oxidation (M))|F}{I|L}DVTK;{[CP]|[EA]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}T]TK 5.3203;4.6406;1.0839 +;-;- + 122 + 1 1.933 58403.2 1.0 2207 3328 5536 DOHH2_400M_050219_2,5537 DOHH2_400M_050219_2,5537,AEFVEVTK False True False False contaminant PXD020620_cell_line DOHH2_400M_050219_2 5538 29.058 253.0 224140.0 25 0 27654.0 + 32892 SEIKINDSGF 10 84 555.2781311566227 1108.5417093800454 2 555.2776977419853 MULTI CID FTMS 0 0 0 5536 163108.28125 0.2247185520648757 4 -0.1449794769287109 2 Unmodified _SEIKINDSGF_ REV__ENSG00000047365|ENST00000303965|ARAP2;REV__ENST00000508066.1_1_4:36162071-36231213:-|nuORF 19.361941925380144 0.5226674314761524 2 {[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{I|L}DEQY 9 -1 + 33.579 0.0 0.0 3.0291 3.0291 65.744 0.0 0.0 0.0 0.4406804435027567 6.372724716820251 0.4406804435027567 0.4406804435027567 0 1.742992819099939 0.0 0.3807196863200844 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{I|L}DEQY;{[TV]|[{I|L}S]}E{I|L}{I|L}DEQY;{[ES]|[DT]|[{I|L}C]}{I|L}[KP][MN]QY;[AG]{I|L}[C(Carbamidomethyl (C))R]{I|L}EQY;[AG]{I|L}[WQ]M{I|L}QY;[AG]{I|L}[C(Carbamidomethyl (C))R]E{I|L}QY;[Q{I|L}][C(Carbamidomethyl (C))R]{I|L}EQY;[Q{I|L}][WQ]M{I|L}QY;[Q{I|L}][C(Carbamidomethyl (C))R]E{I|L}QY 3.0291;2.9894;1.7424;0.90366;0.90366;0.74481;0.43684;0.43684;0.27799 -;-;-;-;-;-;-;-;- 196 1 1.933 51612.6 1.0 2208 3328 5536 DOHH2_400M_050219_2,5538 DOHH2_400M_050219_2,5538,SEIKINDSGF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5540 29.069 466.0 270440.0 25 0 30918.0 + 29028 QEEQHQHTDDR 11 122 711.8001592484461 1421.585765563692 2 711.8013793826103 MULTI CID FTMS 0 0 0 5539 187598.609375 0.0858696208789228 -4 0.2214908599853515 1 Unmodified _QEEQHQHTDDR_ REV__CON__Q86YZ3;REV__ENSG00000197915|ENST00000368801|HRNR 13.614867670302877 0.751941774060705 2 {[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y 12 -1 + 96.781 0.0 0.0 6.8079 6.8079 82.106 0.0 0.0 0.0 6.49610228199019 10.62977812912628 6.49610228199019 2.90034611362519 0 1.1989700043360187 1.154901959985743 1.316901560044258 1.4489700043360187 {[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQDQA{M(Oxidation (M))|F}Y;[AG]AHDEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAGAQDA{M(Oxidation (M))|F}Y;[AG]ADHEAQQDA{M(Oxidation (M))|F}Y;[AG]DAHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQ[AG]DA{M(Oxidation (M))|F}Y;[QA]DHEAQQDA{M(Oxidation (M))|F}Y 6.8079;6.6039;6.4878;6.3674;6.351;6.2856;6.255;6.255;6.1679;6.1673 -;-;-;-;-;-;-;-;-;- 7564 1 1.933 87480.3 1.0 2209 3329 5539 DOHH2_400M_050219_2,5540 DOHH2_400M_050219_2,5540,QEEQHQHTDDR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5541 29.083 800.0 143080.0 25 0 20586.0 + 18019 KSFEDIHQY 9 139 583.7778718796637 1165.5411908261274 2 583.7769653201103 MULTI CID FTMS 0 0 0 5539 125703.0 1.0 0 0.0 2 Unmodified _KSFEDIHQY_ ENSG00000174775|ENST00000311189|HRAS;nc|ENSG00000174775|P01112-2|HRAS 46.0223103267499 0.0490911897871712 2 YEKAD{I|L}HQY 9 4 + 60.222 0.0 0.0 5.1669 5.1669 74.77 0.0 0.0 0.0 35.17409401259975 14.973024840566469 14.973024840566469 1.706962271689747 0 1.9489700043360187 0.0 0.5 1.0994850021680094 YEKAD{I|L}HQY;YEKW{I|L}HQY;KS[{M(Oxidation (M))|F}E]D{I|L}HQY;KSP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}HQY;YEKAD{I|L}H[AG]Y;YEKW{I|L}H[AG]Y;YEKAD{I|L}HYQ;K[YE]AD{I|L}HQY;YEKW{I|L}HYQ;K[YE]W{I|L}HQY 5.1669;5.0204;4.0208;3.8304;3.7979;3.6469;3.6408;3.5419;3.4943;3.3954 -;-;+;-;-;-;-;-;-;- + 2386 + 1 1.933 92420.8 0.6200000047683716 2210 3329 5539 DOHH2_400M_050219_2,5541 DOHH2_400M_050219_2,5541,KSFEDIHQY True True KSFEDIHQY 29.082515 583.77696532011 976352.0 5539.0 nc|ENSG00000174775|P01112-2|HRAS;;ENSG00000174775|ENST00000311189|HRAS 6.345848401387532 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5542 29.091 478.0 250020.0 25 0 48225.0 23601 LTPLHVAAHY 10 118 561.3070296069972 1120.5995062807942 2 561.3071166872978 MULTI CID FTMS 0 0 0 5539 114638.625 0.9239061777497046 -2 0.0486774444580078 3 Unmodified _LTPLHVAAHY_ ENSG00000145362|ENST00000357077|ANK2;ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000145362|Q01484-2|ANK2;nc|ENSG00000145362|Q01484-5|ANK2;nc|ENSG00000151150|Q12955-4|ANK3;nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-7|ANK3 10.823927491677226 0.6659270209832991 2 [K{I|L}]WV[Y{I|L}]HY 8 6 + 15.072 0.0 0.0 1.345 1.345 75.764 0.0 0.0 0.0 1.972893776096216 5.071837567538184 1.972893776096216 9.262137858390814 0 0.0 0.0 0.0 0.0 [K{I|L}]WV[Y{I|L}]HY;[K{I|L}]{[DA]|[EG]}V[Y{I|L}]HY 1.345;0.51845 -;- 130 + 1 1.933 93951.1 1.0 2211 3329 5539 DOHH2_400M_050219_2,5542 DOHH2_400M_050219_2,5542,LTPLHVAAHY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5543 29.097 305.0 211700.0 25 0 29752.0 + 13114 HETFSQHTF 9 101 567.253971202184 1132.4933894711678 2 567.2534057497978 MULTI CID FTMS 0 0 0 5539 103881.125 0.6720855592917275 -1 0.0103359222412109 4 Unmodified _HETFSQHTF_ ENSG00000148110|ENST00000375344|MFSD14B;nc|ENSG00000148110|Q5SR56-2|MFSD14B;nc|ENSG00000290770|Q5VZR4|MFSD14CP 82.5293158979368 0.0169039238599547 2 [HT]{M(Oxidation (M))|F}E{[QS]|[NT]}HT{M(Oxidation (M))|F} 9 2 + 60.829 0.0 0.0 5.3713 5.3713 82.731 0.0 0.0 0.0 0.7378621416091846 43.17771102813636 0.7378621416091846 8.10378004088497 0 1.7786596949921218 0.0 1.0189301784845295 0.0 [HT]{M(Oxidation (M))|F}E{[QS]|[NT]}HT{M(Oxidation (M))|F};[HT]{M(Oxidation (M))|F}{[QS]|[NT]}EHT{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]HE{[QS]|[NT]}HT{M(Oxidation (M))|F};[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{[QS]|[NT]}HT{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]H{[QS]|[NT]}EHT{M(Oxidation (M))|F};[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QS]|[NT]}EHT{M(Oxidation (M))|F};[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P[C(Carbamidomethyl (C))S]HT{M(Oxidation (M))|F};{[MG]|[TS]}YY{[QS]|[NT]}HT{M(Oxidation (M))|F};[HT]{M(Oxidation (M))|F}E{[QS]|[NT]}[{M(Oxidation (M))|F}T]H;[HT]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]HE{M(Oxidation (M))|F} 5.3713;4.6557;4.5699;4.2154;3.8543;3.4998;3.1641;3.0206;3.0093;2.9551 -;-;-;-;-;-;-;-;-;- 575 1 1.933 52796.7 1.0 2212 3329 5539 DOHH2_400M_050219_2,5543 DOHH2_400M_050219_2,5543,HETFSQHTF True True HETFSQHTF 29.096575 567.253405749798 1038152.125 5539.0 nc|ENSG00000148110|Q5SR56-2|MFSD14B;;nc|ENSG00000290770|Q5VZR4|MFSD14CP;;ENSG00000148110|ENST00000375344|MFSD14B 7.370254357655843 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5545 29.102 162.0 292070.0 25 0 21523.0 + 26381 NTDDTIGDLK 10 85 546.2648429509485 1090.515132968697 2 546.2644531130791 MULTI CID FTMS 0 0 0 5544 218187.4375 0.3608232643527804 4 -0.2466506958007812 1 Unmodified _NTDDTIGDLK_ ENSG00000198258|ENST00000586895|UBL5;ENST00000589372.1_1_19:9939013-9939570:+|nuORF 37.07464296494664 0.1884581770199685 2 {[QS]|[NT]}DDT{I|L}[DG]{I|L}K 10 0 + 62.159 0.0 0.0 5.6999 5.6999 91.409 0.0 0.0 0.0 47.663800089887545 16.267959391884546 16.267959391884546 41.27040992755255 0 0.3494850021680094 2.0 0.0 0.4049471895720985 + + {[QS]|[NT]}DDT{I|L}[DG]{I|L}K;{[QS]|[NT]}D[KS][WM][{I|L}P] 5.6999;1.9154 +;- + 83 + 1 1.933 43126.2 1.0 2213 3330 5544 DOHH2_400M_050219_2,5545 DOHH2_400M_050219_2,5545,NTDDTIGDLK False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5546 29.108 335.0 219010.0 25 0 15758.0 27220 PGLEEHWAL 9 122 526.2626094424202 1050.5106659516402 2 526.2620117068291 MULTI CID FTMS 0 0 0 5544 114046.484375 0.8256657242574724 1 -0.026580810546875 2 Unmodified _PGLEEHWAL_ ENST00000376499.7_2_9:84303922-84304000:-|nuORF 30.22481116460888 0.1466181017706357 2 A{I|L} 2 7 26.454 0.0 0.0 2.5182 0.0 0.0 848.3789958850372 0.0 848.3789958850372 0.0 11.18944035183194 0.0 0.0 0 1.0 0.0 0.0 0.0 + A{I|L} 2.5182 + + 279 + 1 1.933 59961.9 1.0 2214 3330 5544 DOHH2_400M_050219_2,5546 DOHH2_400M_050219_2,5546,PGLEEHWAL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5547 29.111 116.0 716270.0 25 0 59980.0 + 33091 SESDLNHSF 9 111 518.2224034772796 1034.4302540213591 2 518.2223388552666 MULTI CID FTMS 0 0 0 5544 288170.8125 0.2518139188905783 -2 0.0490531921386718 3 Unmodified _SESDLNHSF_ ENSG00000198833|ENST00000435041|UBE2J1 45.69961567697781 0.0497987121815769 2 {[ES]|[DT]|[{I|L}C]}SD{I|L}N[HS]{M(Oxidation (M))|F} 9 0 + 29.077 0.0 0.0 2.8109 2.8109 78.64 0.0 0.0 0.0 13.213436626437522 2.0333480973846854 2.0333480973846854 12.703037561203846 0 0.7302046884880937 0.0 0.7302046884880937 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}SD{I|L}N[HS]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}SD{I|L}GG[HS]{M(Oxidation (M))|F};[HN]{[WT]|[RM]}D{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};[HN]{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}[WE]N[HS]{M(Oxidation (M))|F};[HN]{I|L}{[CA]|SS}D{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[MG]|[TS]}DD[HV]{M(Oxidation (M))|F}{[QS]|[NT]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[YT][HS]{M(Oxidation (M))|F} 2.8109;1.5829;1.0926;0.95138;0.94976;0.90193;0.32375;0.18898 +;-;-;-;-;-;-;- + 146 + 1 1.933 68161.9 1.0 2215 3330 5544 DOHH2_400M_050219_2,5547 DOHH2_400M_050219_2,5547,SESDLNHSF True True SESDLNHSF 29.110847 518.2233 5833485.0 5544.0 ENSG00000198833|ENST00000435041|UBE2J1 6.517043272654216 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5548 29.115 192.0 352010.0 25 0 45610.0 + 26353 NSKYHGVSL 9 102 502.7620558876469 1003.5095588420938 2 502.7610656619072 MULTI CID FTMS 0 0 0 5544 126063.3203125 0.8574479250968634 -2 0.0490531921386718 4 Unmodified _NSKYHGVSL_ ENSG00000145386|ENST00000274026|CCNA2 19.256988751693697 0.3154191944385105 2 [{M(Oxidation (M))|F}V]KQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EG 8 8 19.9 0.0 0.0 1.983 0.0 0.0 0.0 68.05133997134999 68.05133997134999 0.8144918611703638 0.0 0.0 0.0 0 0.1677353201839438 2.0 0.3494850021680094 0.0 [{M(Oxidation (M))|F}V]KQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EG 1.983 - 168 + 1 1.933 54359.4 1.0 2216 3330 5544 DOHH2_400M_050219_2,5548 DOHH2_400M_050219_2,5548,NSKYHGVSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5549 29.123 488.0 483560.0 25 0 85106.0 11440 GHRQVVQDL 9 224 351.1912395215477 0 351.1909973025322 PEAK CID FTMS 0 0 0 5544 104315.3515625 0.777357587406965 3 -0.1676139831542968 5 Unmodified _GHRQVVQDL_ ENSG00000141447|ENST00000319481|OSBPL1A;ENST00000581343.1_1_18:21948241-21957497:-|nuORF;ENST00000582350.5_1_18:21927721-21957497:-|nuORF;ENST00000582618.1_1_18:21946774-21948319:-|nuORF 4.75600775471527 0.3444685223463735 2 K 1 9 4.6347 0.0 0.0 0.66175 0.0 0.0 116.00002611013844 453.23826013736567 569.2382862475041 0.0 0.0 0.0 0.0 0 0.1139829889124311 0.0 0.0 0.0 K 0.66175 - 9 + 1 1.933 185427.8 1.0 2217 3330 5544 DOHH2_400M_050219_2,5549 DOHH2_400M_050219_2,5549,GHRQVVQDL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5551 29.14 800.0 178120.0 25 0 9309.1 + 23430 LTEQYNEQY 9 163 594.2642903320569 1186.5140277309138 2 594.2643310427666 MULTI CID FTMS 0 0 0 5550 151447.921875 0.3701356874766724 6 -0.4064979553222656 1 Unmodified _LTEQYNEQY_ ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 65.23502041540118 0.0231836506122253 2 [AG]ET{I|L}YNEQY 10 4 + 55.39 0.0 0.0 4.6683 4.6683 78.727 0.0 0.0 0.0 6.565535041648388 8.947340481202062 6.565535041648388 6.565535041648388 0 0.5579021467263782 1.3979400086720375 1.064909327626439 0.8807196863200843 [AG]ET{I|L}YNEQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}YNEQY;[AG]ETY{I|L}NEQY;{[ET]|[MV]}Q{I|L}YNEQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}YGGEQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TY{I|L}NEQY;[AG]ET{I|L}YN[HA][DP];[AG]YDQ[{I|L}T]EQY;[AG]YDWREQY;[AG]ET{I|L}YGGEQY 4.6683;4.1149;3.8867;3.7755;3.3389;3.3334;3.258;3.2095;3.1771;3.1536 -;-;-;-;-;-;-;-;-;- 1713 1 1.933 108540.7 0.6499999761581421 2218 3331 5550 DOHH2_400M_050219_2,5551 DOHH2_400M_050219_2,5551,LTEQYNEQY True True LTEQYNEQY 29.139545 594.264331042767 182106272.0 5550.0 ENSG00000173933|ENST00000310092|RBM4;;nc|ENSG00000239306|Q96PK6-5|RBM14 6.344168186187744 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5552 29.141 37.0 1097900.0 25 0 377870.0 -1 0 54 414.2567940667145 413.2495176001145 1 414.2584106326103 MULTI CID FTMS 0 0 0 5550 899420.1875 0.2252547473457433 6 -0.4064979553222656 2 2 [{I|L}A]A 3 -1 20.29 0.0 0.0 4.91 0.0 0.0 0.0 155.0695303777114 155.0695303777114 12.191512336730028 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}A]A 4.91 - 4 1 1.933 37375.3 1.0 2219 3331 5550 DOHH2_400M_050219_2,5552 DOHH2_400M_050219_2,5552, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5553 29.143 128.0 179730.0 25 0 12824.0 + -1 PPWLLMTL 8 56 493.7723915222619 0 493.7721130251884 PEAK CID FTMS 0 0 0 5550 224024.828125 0.2539401525710787 6 -0.4064979553222656 3 Oxidation (M) _PPWLLM(Oxidation (M))TL_ REV__ENST00000404404.5_1_7:5036913-5037096:+|nuORF 10.183394434864962 0.5394990767616434 2 R 1 -1 5.4846 0.0 0.0 0.55651 0.0 0.0 76.04934739823632 750.3618258111936 826.41117320943 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.55651 - 7 + 1 1.933 23271.8 1.0 2220 3331 5550 DOHH2_400M_050219_2,5553 DOHH2_400M_050219_2,5553,PPWLLMTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5554 29.151 440.0 268840.0 25 0 46209.0 25557 NEVDGQDYHF 10 113 612.2518040967265 1222.4890552602528 2 612.2516967654228 MULTI CID FTMS 0 0 0 5550 188242.828125 0.3046140008234601 -2 0.0652980804443359 4 Unmodified _NEVDGQDYHF_ ENSG00000082458|ENST00000374360|DLG3;nc|ENSG00000082458|Q92796-2|DLG3;nc|ENSG00000082458|Q92796-3|DLG3 18.1463463914782 0.5430639438673815 2 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 8 + 100.26 0.0 0.0 8.2011 8.2011 90.271 0.0 0.0 0.0 7.269987279362624 75.96254221952 7.269987279362624 7.865320089195606 0 1.0 0.0 1.7249073637206092 1.1861818737241734 [HD]EAQQDA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQDA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQ[AG]DA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HA[AG]QDA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQW{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQWGA{M(Oxidation (M))|F}Y;[HD]EAQ{[DA]|[EG]}GA{M(Oxidation (M))|F}Y;{[DA]|[EG]}Q{[YC]|[HE]}QDA{M(Oxidation (M))|F}Y 8.2011;7.5577;7.4514;7.4514;6.808;6.808;6.7119;6.5085;6.4023;6.2389 -;-;-;-;-;-;-;-;-;- 2336 1 1.933 89014.8 1.0 2221 3331 5550 DOHH2_400M_050219_2,5554 DOHH2_400M_050219_2,5554,NEVDGQDYHF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5555 29.154 112.0 391310.0 25 0 37484.0 + 41289 VPHTRPVSL 9 77 503.2953036123442 1004.5760542914884 2 503.2960388064384 MULTI CID FTMS 0 0 0 5550 184866.046875 0.2946657389260637 6 -0.4064979553222656 5 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 13.042465956692816 0.4836390050082244 2 VPH 3 6 29.45 0.0 0.0 2.9316 0.0 0.0 0.0 668.3731783502561 668.3731783502561 16.68575633547142 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + VPH 2.9316 + + 25 + 1 1.933 40564.2 1.0 2222 3331 5550 DOHH2_400M_050219_2,5555 DOHH2_400M_050219_2,5555,VPHTRPVSL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5556 29.161 429.0 627630.0 25 0 46212.0 635 AELEENKELA 10 175 382.5267257747888 1144.5583479245663 3 382.5265380740166 MULTI CID FTMS 0 0 0 5550 176494.171875 0.1301714553888982 -2 0.0652980804443359 6 Unmodified _AELEENKELA_ ENSG00000155827|ENST00000389120|RNF20 16.149105407346934 0.5765757077271437 2 AEMGKGSC 8 7 80.246 0.0 0.0 7.0111 0.0 0.0 0.0 378.2263176587121 378.2263176587121 66.72373537096456 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 1.2302046884880935 0.3494850021680094 AEMGKGSC 7.0111 - 661 + 1 1.933 210022.7 1.0 2223 3331 5550 DOHH2_400M_050219_2,5556 DOHH2_400M_050219_2,5556,AELEENKELA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5557 29.165 191.0 259210.0 25 0 47759.0 + 7304 EEVKPPDR 8 64 485.25374207846966 968.4929312237392 2 485.2534057497978 MULTI CID FTMS 0 0 0 5550 141350.609375 0.409224104238064 6 -0.4064979553222656 7 Unmodified _EEVKPPDR_ REV__ENSG00000248713|ENST00000511828|C4orf54 16.942295170755138 0.6606234159769251 2 EEAP 4 -1 39.253 0.0 0.0 4.0529 0.0 0.0 0.0 539.2954805963499 539.2954805963499 36.48829961363592 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 EEAP 4.0529 - 16 + 1 1.933 43324.3 1.0 2224 3331 5550 DOHH2_400M_050219_2,5557 DOHH2_400M_050219_2,5557,EEVKPPDR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5558 29.179 800.0 324430.0 25 0 29479.0 + + -1 ASNDYTQQATQSYG 14 158 788.3317372163427 1574.6489214994854 2 788.3313476443291 MULTI CID FTMS 0 0 0 5550 120988.3671875 0.1172225843391919 -2 0.0652980804443359 8 Carbamidomethyl (C) _DQWHHKYDC(Carbamidomethyl (C))MR_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 8.155526934196011 0.8366696279279818 2 {[CP]|[EA]}NDYTQQA 9 -1 58.905 0.0 0.0 3.7408 0.0 0.0 0.0 551.2121390658541 551.2121390658541 12.358712047287412 0.0 0.0 0.0 0 0.4929928190999391 0.0 2.0273109370204456 1.8807196863200843 {[CP]|[EA]}NDYTQQA 3.7408 - 40557 1 1.933 173671.0 0.6899999976158142 2225 3331 5550 DOHH2_400M_050219_2,5558 DOHH2_400M_050219_2,5558,DQWHHKYDCMR False False ASNDYTQQATQSYG 29.178685 788.331347644329 19281231.0 5550.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 9.392396608988443 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5559 29.193 800.0 103600.0 25 0 6754.4 + -1 SRPDSILGMQF 11 143 633.8106751833446 0 633.8106567263603 PEAK CID FTMS 0 0 0 5550 103936.546875 0.6609377254233637 6 -0.4064979553222656 9 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 15.248480904072842 0.4017935032673427 2 {M(Oxidation (M))|F}Q 2 -1 18.698 0.0 0.0 1.4774 0.0 0.0 825.4319449938392 162.05620752506096 987.4881525189002 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.75 {M(Oxidation (M))|F}Q 1.4774 + + 117 + 1 1.933 65021.8 0.6499999761581421 2226 3331 5550 DOHH2_400M_050219_2,5559 DOHH2_400M_050219_2,5559,SRPDSILGMQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5561 29.201 267.0 425090.0 25 0 180700.0 45481 YTLKWCEV 8 98 521.2571136164569 0 521.2570678591728 PEAK CID FTMS 0 0 0 5560 271617.21875 1.0 0 0.0 1 Unmodified _YTLKWCEV_ ENSG00000162571|ENST00000379289|TTLL10;nc|ENSG00000162571|Q6ZVT0-2|TTLL10;nc|ENSG00000162571|Q6ZVT0-3|TTLL10 5.760428011301431 0.5786759180849727 2 D 1 8 3.4949 0.0 0.0 0.33588 0.0 0.0 840.3835376803762 82.06686578922108 922.4504034695972 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.33588 - 26 + 1 1.944 92486.3 1.0 2227 3332 5560 DOHH2_400M_050219_2,5561 DOHH2_400M_050219_2,5561,YTLKWCEV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5562 29.215 800.0 345520.0 25 0 6039.4 -1 0 126 729.8746806038157 2186.602212411647 3 730.3294555544853 MULTI CID FTMS 0 0 0 5560 47326.41015625 0.7862127319812312 1 -0.0716876983642578 2 2 G 1 -1 6.9897 0.0 0.0 0.31966 0.0 0.0 530.8857588786935 1595.6692033653558 2126.5549622440494 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.31966 - 255 + 1 1.944 193143.5 0.5699999928474426 2228 3332 5560 DOHH2_400M_050219_2,5562 DOHH2_400M_050219_2,5562, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5563 29.218 135.0 557150.0 25 0 77815.0 + 35819 SVKTHFSM 8 99 468.7337950111837 935.4530370891672 2 468.7342712283134 MULTI CID FTMS 0 0 0 5560 427604.40625 1.0 0 0.0 3 Unmodified _SVKTHFSM_ ENST00000307897.9_1_15:66801186-66806347:+|nuORF 53.832793166522166 0.1212192986213991 2 [VS]KTH{M(Oxidation (M))|F}SM 8 0 + 66.694 0.0 0.0 7.1296 7.1296 95.579 0.0 0.0 0.0 42.88155049864216 13.399480616943508 13.399480616943508 31.646518864155126 0 1.7302046884880935 2.0 0.6307196863200843 0.0 + + [VS]KTH{M(Oxidation (M))|F}SM;{[{M(Oxidation (M))|F}H]|[RQ]}TKSVSM;[HT]{M(Oxidation (M))|F}KSVSM;[HT]K{M(Oxidation (M))|F}SVSM;[HT]K[VS]{M(Oxidation (M))|F}SM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HT]KVSM;{[{M(Oxidation (M))|F}H]|[RQ]}TSKVSM;[HT]{M(Oxidation (M))|F}SKVSM;[Y{I|L}][Y{I|L}]{M(Oxidation (M))|F}SM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KS][H{I|L}]SM 7.1296;3.7466;3.7466;3.4868;3.4697;3.4;3.3212;3.3212;3.0437;2.361 +;-;-;-;-;-;-;-;-;- + 263 + 1 1.944 64017.5 1.0 2229 3332 5560 DOHH2_400M_050219_2,5563 DOHH2_400M_050219_2,5563,SVKTHFSM True True SVKTHFSM 29.217913 468.734271228313 2064962.0 5560.0 ENST00000307897.9_1_15:66801186-66806347:+|nuORF 6.822575887044271 2.0 True 8.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5564 29.22 119.0 728750.0 25 0 98763.0 + -1 FELREMVR 8 98 548.2834825618476 1094.552412190495 2 548.2829467654228 MULTI CID FTMS 0 0 0 5560 365576.53125 0.253937265793215 -2 0.095926284790039 4 Oxidation (M) _FELREM(Oxidation (M))VR_ REV__ENST00000297579.9_1_8:104432557-104433221:+|nuORF 20.453626601364224 0.6087503291685402 2 [VP]SHEPPH[VP] 10 -1 + 55.817 0.0 0.0 5.0995 5.0995 85.354 0.0 0.0 0.0 7.880428617483105 38.82718573835136 7.880428617483105 10.235973525367555 0 2.1861818737241734 0.7695510786217261 0.2614393726401688 0.0 [VP]SHEPPH[VP];[{I|L}T]HPPEH[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS]EPPH[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[MS]|[{M(Oxidation (M))|F}A]}PPH[VP];[VP]SH[HV]SH[VP];[{I|L}T]H[WH]H[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PESVPH[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[{I|L}T]EH[HK];[VP]SH[WH]H[VP];[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}EH[HK] 5.0995;4.1643;3.5725;3.2247;2.9658;2.8249;2.7353;2.6576;2.644;2.3408 -;-;-;-;-;-;-;-;-;- 493 1 1.944 73845.0 1.0 2230 3332 5560 DOHH2_400M_050219_2,5564 DOHH2_400M_050219_2,5564,FELREMVR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5565 29.224 198.0 702390.0 25 0 86739.0 + + 45442 HLDTLTEHY 9 127 564.7220933722599 1127.4296338113195 2 564.7220947146416 MULTI CID FTMS 0 0 0 5560 361106.875 0.3402710172658811 -2 0.095926284790039 5 Unmodified _YTDTYSDTY_ ENSG00000105058|ENST00000263384|FAM32A;nc|ENSG00000105058|Q9Y421-3|FAM32A 67.34385681178166 0.0221257235307089 2 [YT]DST{[YD]|[{M(Oxidation (M))|F}M]}TY 9 -1 + 62.951 0.0 0.0 5.5836 5.5836 78.54 0.0 0.0 0.0 15.966649594412566 29.16882690210832 15.966649594412566 3.26606256887672 0 0.8494850021680094 1.5228787452803376 2.193672679568534 0.0 [YT]DST{[YD]|[{M(Oxidation (M))|F}M]}TY;[YT]DTS{[YD]|[{M(Oxidation (M))|F}M]}TY;[YT]SDT{[YD]|[{M(Oxidation (M))|F}M]}TY;[YT]SES{[YD]|[{M(Oxidation (M))|F}M]}TY;[YT]SSE{[YD]|[{M(Oxidation (M))|F}M]}TY;[YT]DS{NN|[MP]|[D{I|L}]|[EV]}[HD]Y;[YT]D[W{M(Oxidation (M))|F}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y;{[ES]|[DT]|[{I|L}C]}YST{[YD]|[{M(Oxidation (M))|F}M]}TY;[H{I|L}]DDM{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;[H{I|L}]DDS{[YD]|[{M(Oxidation (M))|F}M]}TY 5.5836;5.2939;4.5783;4.2886;3.8263;3.7462;3.6893;3.4759;3.304;3.2775 -;-;-;-;-;-;-;-;-;- 3138 1 1.944 109389.0 1.0 2231 3332 5560 DOHH2_400M_050219_2,5565 DOHH2_400M_050219_2,5565,YTDTYSDTY False False HLDTLTEHY 29.224174 564.722094714642 1140905.75 5560.0 ENSG00000105058|ENST00000263384|FAM32A;;nc|ENSG00000105058|Q9Y421-3|FAM32A 9.278071880340576 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5566 29.227 111.0 829680.0 25 0 123020.0 + -1 AESMRIYLF 9 82 573.2865615939971 1144.5585702547942 2 573.2869140505791 MULTI CID FTMS 0 0 0 5560 283088.96875 0.5805990378390455 -1 0.069345474243164 6 Oxidation (M) _AESM(Oxidation (M))RIYLF_ REV__ENSG00000181499|ENST00000321252|OR6T1 7.289230182591677 0.6602208344931196 2 MGKG 4 -1 24.553 0.0 0.0 2.1452 0.0 0.0 200.07989941157703 568.2783907525999 768.3582901641769 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 MGKG 2.1452 - 94 + 1 1.944 75030.0 1.0 2232 3332 5560 DOHH2_400M_050219_2,5566 DOHH2_400M_050219_2,5566,AESMRIYLF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5567 29.239 714.0 154780.0 25 0 13216.0 19323 LELTLGKA 8 160 422.76063638244216 843.5067198316843 2 422.7603332400322 MULTI CID FTMS 0 0 0 5560 104299.0546875 1.0 0 0.0 7 Unmodified _LELTLGKA_ ENSG00000188897|ENST00000696174|unknown 21.74664581756881 0.5868176546531598 2 {[QN]|[E{I|L}]|[KN]}{I|L}[RK]W 6 4 + 34.789 0.0 0.0 4.1244 4.1244 72.081 0.0 0.0 0.0 19.115103821334536 0.1099538430146296 0.1099538430146296 2.833012287035501 0 0.3252574989159953 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}[RK]W;{[QN]|[E{I|L}]|[KN]}{I|L}T[KA]VA;{[QN]|[E{I|L}]|[KN]}{I|L}T[KQ]{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}T[KA]G{I|L} 4.1244;3.7885;3.4486;2.8879 -;-;-;- 252 + 1 1.944 92646.6 1.0 2233 3332 5560 DOHH2_400M_050219_2,5567 DOHH2_400M_050219_2,5567,LELTLGKA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5568 29.253 800.0 173720.0 25 0 13175.0 38514 TSMDYYYY 8 161 553.211922617857 1104.409292302514 2 553.2119628787041 MULTI CID FTMS 0 0 0 5560 94309.8125 0.89742327656107 -1 0.069345474243164 8 Unmodified _TSMDYYYY_ ENSG00000157483|ENST00000288235|MYO1E 10.183394434864962 0.7604730176254005 2 Y 1 7 15.485 0.0 0.0 1.4021 0.0 0.0 923.3350868355202 0.0 923.3350868355202 0.0 0.9150616163734782 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.4021 + + 639 + 1 1.944 109920.6 0.5400000214576721 2234 3332 5560 DOHH2_400M_050219_2,5568 DOHH2_400M_050219_2,5568,TSMDYYYY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5569 29.264 664.0 192890.0 25 0 16036.0 + 19183 LEERRIKEI 9 138 395.9031113990649 0 395.9029724001884 PEAK CID FTMS 0 0 0 5560 89762.3125 1.0 0 0.0 9 Unmodified _LEERRIKEI_ ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205955|Q58FG0|HSP90AA5P 23.78978130925829 0.1667157386347964 2 E 1 8 4.2082 0.0 0.0 0.53282 0.0 0.0 575.6595267758659 82.06687341861561 657.7264001944815 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 + E 0.53282 + + 13 + 1 1.944 103861.3 1.0 2235 3332 5560 DOHH2_400M_050219_2,5569 DOHH2_400M_050219_2,5569,LEERRIKEI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5571 29.272 303.0 421540.0 25 0 27466.0 + 33093 SESELGRKW 9 155 364.5207206141874 1090.5403324427623 3 364.5208618044853 MULTI CID FTMS 0 0 0 5570 266983.90625 1.0 0 0.0 1 Unmodified _SESELGRKW_ ENSG00000173436|ENST00000322753|MICOS10;ENST00000462646.5_1_1:19923518-19941047:+|nuORF;ENST00000467029.5_1_1:19923518-19943759:+|nuORF;ENST00000498067.1_1_1:19923518-19924374:+|nuORF;ENST00000498642.5_1_1:19923539-19952083:+|nuORF;ENST00000602662.1_3_1:19923518-19981524:+|nuORF;nc|ENSG00000173436|Q5TGZ0-2|MICOS10 37.97399986684836 0.0865783450051559 2 {I|L}ESEWS 6 6 38.382 0.0 0.0 3.5196 0.0 0.0 341.2171803205094 0.0 341.2171803205094 0.0 15.947209416731807 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 {I|L}ESEWS 3.5196 - 218 1 1.944 103641.6 1.0 2236 3333 5570 DOHH2_400M_050219_2,5571 DOHH2_400M_050219_2,5571,SESELGRKW True True SESELGRKW 29.272282 364.520861804485 1389707.375 5570.0 ENST00000467029.5_1_1:19923518-19943759:+|nuORF;;ENSG00000173436|ENST00000322753|MICOS10;;ENST00000462646.5_1_1:19923518-19941047:+|nuORF;;ENST00000498642.5_1_1:19923539-19952083:+|nuORF;;ENST00000498067.1_1_1:19923518-19924374:+|nuORF;;ENST00000602662.1_3_1:19923518-19981524:+|nuORF;;nc|ENSG00000173436|Q5TGZ0-2|MICOS10 3.9510919650395713 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5572 29.274 64.0 1149400.0 25 0 181830.0 + 3397 AYSSYVHQY 9 84 559.2509961557248 1116.4874393782495 2 559.2509033083916 MULTI CID FTMS 0 0 0 5570 797706.9375 0.4574128972743687 -1 0.0716876983642578 2 Unmodified _AYSSYVHQY_ ENSG00000062725|ENST00000083182|APPBP2;ENST00000592995.1_1_17:58538022-58538124:-|nuORF 41.8396318013385 0.0653578398400075 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSYVHQY 9 0 + 71.71 0.0 0.0 6.4228 6.4228 80.512 0.0 0.0 0.0 25.17728766960431 2.552725051033065 2.552725051033065 2.552725051033065 0 0.7134679910804405 2.0 0.0 0.7742275032520141 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSYVHQY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSYVHYQ;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSYVHS{[CT]|[{M(Oxidation (M))|F}G]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSYVH[AG]Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSY{I|L}W{NN|[MP]|[D{I|L}]|[EV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YC(Carbamidomethyl (C))]{I|L}HQY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSYV[DP]{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YC(Carbamidomethyl (C))]{I|L}HYQ;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HM]APHQY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HM]APHYQ 6.4228;6.1942;5.4837;4.9046;4.3992;4.2861;4.1678;4.0574;3.9667;3.738 +;-;-;-;-;-;-;-;-;- + 566 + 1 1.944 60207.3 1.0 2237 3333 5570 DOHH2_400M_050219_2,5572 DOHH2_400M_050219_2,5572,AYSSYVHQY True True AYSSYVHQY 29.27384 559.250903308392 7722612.5 5570.0 ENSG00000062725|ENST00000083182|APPBP2;;ENST00000592995.1_1_17:58538022-58538124:-|nuORF 10.116781870524088 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5573 29.278 232.0 323360.0 25 0 64752.0 6462 EAFLVQEVVE 10 84 581.8035134005529 1161.5924738679057 2 581.8027831912041 MULTI CID FTMS 0 0 0 5570 168105.1875 0.5764106258928453 -1 0.0716876983642578 3 Unmodified _EAFLVQEVVE_ ENSG00000099992|ENST00000215790|TBC1D10A;ENST00000462073.5_1_22:30688366-30689945:-|nuORF;nc|ENSG00000099992|Q9BXI6-2|TBC1D10A 12.240655878213236 0.6421556946785427 2 [VG]H 3 9 18.416 0.0 0.0 1.5854 0.0 0.0 0.0 865.4285949135503 865.4285949135503 4.146518864155128 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [VG]H 1.5854 - 118 + 1 1.944 61750.8 1.0 2238 3333 5570 DOHH2_400M_050219_2,5573 DOHH2_400M_050219_2,5573,EAFLVQEVVE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5574 29.283 268.0 363340.0 25 0 45604.0 + 10416 FTATRPGVY 9 113 506.26590420069056 1010.5172554681812 2 506.2641479372978 MULTI CID FTMS 0 0 0 5570 146051.171875 0.1243866813848585 -2 0.1410331726074218 4 Unmodified _FTATRPGVY_ ENSG00000198712|ENST00000361739|MT-CO2 27.628801355627647 0.1796483985696185 2 T{[RE]|[WV]}WATE 7 7 42.351 0.0 0.0 4.191 0.0 0.0 119.07389266181796 0.0 119.07389266181796 0.0 26.86645088746296 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 T{[RE]|[WV]}WATE 4.191 - 204 1 1.944 77684.8 1.0 2239 3333 5570 DOHH2_400M_050219_2,5574 DOHH2_400M_050219_2,5574,FTATRPGVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5575 29.297 800.0 198690.0 25 0 22527.0 -1 YTCETDGACM 10 139 583.6958387407207 1165.3771245482412 2 583.6956054568291 MULTI CID FTMS 0 0 0 5570 128241.3046875 1.0 0 0.0 5 Carbamidomethyl (C),Oxidation (M) _YTC(Carbamidomethyl (C))ETDGACM(Oxidation (M))_ ENSG00000135503|ENST00000257963|ACVR1B;nc|ENSG00000135503|P36896-2|ACVR1B;nc|ENSG00000135503|P36896-3|ACVR1B;nc|ENSG00000135503|P36896-4|ACVR1B 20.453626601364224 0.5043500229302764 2 YTD 3 -1 59.182 0.0 0.0 5.0784 0.0 0.0 0.0 783.2163576755127 783.2163576755127 34.23393743112328 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.9247425010840048 0.0 YTD 5.0784 - 149 + 1 1.944 119912.5 0.6299999952316284 2240 3333 5570 DOHH2_400M_050219_2,5575 DOHH2_400M_050219_2,5575,YTCETDGACM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5576 29.311 800.0 175700.0 25 0 14169.0 + 37588 TLKAKNMEI 9 166 524.2969624973528 1046.5793720615054 2 524.2959472537041 MULTI CID FTMS 0 0 0 5570 129642.7421875 1.0 0 0.0 6 Unmodified _TLKAKNMEI_ ENSG00000084090|ENST00000337288|STARD7 51.41523569358685 0.0372669606867193 2 [{I|L}T]KA[C(Carbamidomethyl (C))Q]{I|L}T{I|L} 9 4 + 56.309 0.0 0.0 5.3803 5.3803 87.778 0.0 0.0 0.0 15.746747421738611 14.973024840566469 14.973024840566469 15.746747421738611 0 1.5924778212679485 2.0 0.5796896906561032 0.3494850021680094 [{I|L}T]KA[C(Carbamidomethyl (C))Q]{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[WY]K{I|L}VP;{[QN]|[E{I|L}]|[KN]}[WY]{I|L}KVP;{[QN]|[E{I|L}]|[KN]}[WY]K[VP]{I|L};[KA]K[MN]E{I|L}T{I|L};[K{I|L}]N[DC]K{I|L}T{I|L};[MN]E[KA]K{I|L}T{I|L};[K{I|L}]TA[C(Carbamidomethyl (C))Q]{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[KA]K{I|L}T{I|L};[TA][K{I|L}][C(Carbamidomethyl (C))Q]{I|L}T{I|L} 5.3803;3.8757;3.3761;3.0971;2.9097;2.1261;1.9898;1.9562;1.7458;1.7239 -;-;-;-;-;-;-;-;-;- 692 1 1.944 112265.8 0.5799999833106995 2241 3333 5570 DOHH2_400M_050219_2,5576 DOHH2_400M_050219_2,5576,TLKAKNMEI True True TLKAKNMEI 29.310819 524.295947253704 484304.28125 5570.0 ENSG00000084090|ENST00000337288|STARD7 1.4402403831481934 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5577 29.319 464.0 189730.0 25 0 12983.0 + -1 HWMQTLYE 8 116 562.2478027479707 1122.4810525627413 2 562.2485229372978 MULTI CID FTMS 0 0 0 5570 112218.40625 1.0 0 0.0 7 Oxidation (M) _HWM(Oxidation (M))QTLYE_ REV__ENSG00000065150|ENST00000651721|IPO5;REV__nc|ENSG00000065150|O00410-2|IPO5;REV__nc|ENSG00000065150|O00410-3|IPO5 30.22481116460888 0.4082965392918993 2 [Y{M(Oxidation (M))|F}]{I|L}QMKMY 8 -1 + 34.178 0.0 0.0 3.0449 3.0449 74.34 0.0 0.0 0.0 17.188718424511492 5.83075910631954 5.83075910631954 7.709632307467022 0 0.5629529932484498 0.0 0.0 0.7614393726401688 [Y{M(Oxidation (M))|F}]{I|L}QMKMY;[Y{M(Oxidation (M))|F}]{I|L}Q[YN]E{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T][YC(Carbamidomethyl (C))]Q{I|L}EY;[Y{M(Oxidation (M))|F}]{I|L}[AG]MKMY;[Y{M(Oxidation (M))|F}][WK]WMY;[Y{M(Oxidation (M))|F}]{I|L}QMK{M(Oxidation (M))|F}{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}]{I|L}[AG][YN]E{M(Oxidation (M))|F};[AG]GSP{I|L}E[NS]EY;{[QG]|[NA]}SP{I|L}E[NS]EY;[Y{M(Oxidation (M))|F}][WK]{[DA]|[EG]}MY 3.0449;2.3581;2.2271;2.2198;1.95;1.867;1.5329;1.5227;1.4967;1.4301 -;-;-;-;-;-;-;-;-;- 270 + 1 1.944 71992.2 1.0 2242 3333 5570 DOHH2_400M_050219_2,5577 DOHH2_400M_050219_2,5577,HWMQTLYE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5578 29.326 393.0 80744.0 25 0 8766.8 + 9248 FHDQPPADDYF 11 67 676.2821114161833 1350.5496698991665 2 676.2806274294853 MULTI CID FTMS 0 0 0 5570 96256.7421875 1.0 0 0.0 8 Unmodified _FHDQPPADDYF_ REV__ENSG00000146828|ENST00000354161|SLC12A9 8.745405648335112 0.8338865417133445 2 Q[HD]{M(Oxidation (M))|F}Y 5 -1 20.502 0.0 0.0 1.518 0.0 0.0 642.2656866001415 0.0 642.2656866001415 0.0 14.30400924012389 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 Q[HD]{M(Oxidation (M))|F}Y 1.518 - 64 + 1 1.944 30867.9 1.0 2243 3333 5570 DOHH2_400M_050219_2,5578 DOHH2_400M_050219_2,5578,FHDQPPADDYF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5579 29.33 207.0 477300.0 25 0 136070.0 -1 0 80 490.2845730995976 489.2772966329976 1 490.2837097048759 MULTI CID FTMS 0 0 0 5570 249425.34375 0.3679433783974533 -3 0.1676139831542968 9 2 {M(Oxidation (M))|F} 1 -1 10.837 0.0 0.0 2.215 0.0 0.0 324.1983456826053 0.0 324.1983456826053 0.0 7.369580574222255 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.215 - 8 + 1 1.944 81985.1 1.0 2244 3333 5570 DOHH2_400M_050219_2,5579 DOHH2_400M_050219_2,5579, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5580 29.341 551.0 218480.0 25 0 12260.0 -1 0 95 640.0459535978039 2556.154708524816 4 640.2967407107353 MULTI CID FTMS 0 0 0 5570 135783.25 0.5722289087366939 -2 0.1410331726074218 10 2 {M(Oxidation (M))|F}{I|L}SHK[MN][NP]W[KP] 12 -1 29.587 0.0 0.0 1.1575 0.0 0.0 1058.4105834892214 0.0 1058.4105834892214 0.0 17.36880000633434 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}SHK[MN][NP]W[KP] 1.1575 - 358 + 1 1.944 93722.6 1.0 2245 3333 5570 DOHH2_400M_050219_2,5580 DOHH2_400M_050219_2,5580, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5581 29.344 131.0 415490.0 25 0 45832.0 7425 EGLQKEVY 8 85 483.25039353221047 0 483.2504760622978 PEAK CID FTMS 0 0 0 5570 152964.15625 0.9904794762745724 -1 0.0716876983642578 11 Unmodified _EGLQKEVY_ nc|ENSG00000156313|Q92834|RPGR 13.50788311687929 0.5021269579892848 2 T 1 8 4.6041 0.0 0.0 0.47736 0.0 0.0 482.2311814962584 378.18222986392817 860.4134113601866 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.47736 - 2 + 1 1.944 47746.9 1.0 2246 3333 5570 DOHH2_400M_050219_2,5581 DOHH2_400M_050219_2,5581,EGLQKEVY False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 5583 29.348 35.0 1050800.0 25 0 186390.0 -1 ECKECRKCFY 10 53 711.8001592484461 1421.585765563692 2 711.7998535037041 MULTI CID FTMS 0 0 0 5582 1435932.375 0.657270163461313 1 -0.0885982513427734 1 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFY_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 6.723162845929126 0.6955379296933136 2 HEAQQDA{M(Oxidation (M))|F}Y 9 -1 62.189 0.0 0.0 4.3746 0.0 0.0 314.1232777326188 0.0 314.1232777326188 0.0 45.19947067701486 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.7134679910804405 HEAQQDA{M(Oxidation (M))|F}Y 4.3746 - 195 1 1.935 31215.9 1.0 2247 3334 5582 DOHH2_400M_050219_2,5583 DOHH2_400M_050219_2,5583,ECKECRKCFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5584 29.362 800.0 71184.0 25 0 4691.7 -1 YLMKFYCRCFQ 11 82 808.3618126346516 1614.7090723361032 2 808.8658325076103 MULTI CID FTMS 0 0 0 5582 85393.890625 0.8444954023889885 1 -0.0885982513427734 2 2 Carbamidomethyl (C) _YLMKFYC(Carbamidomethyl (C))RC(Carbamidomethyl (C))FQ_ ENST00000599501.6_3_2:98292334-98305447:+|nuORF 1.3295316138638542 0.8688751186870782 2 NYQ 3 -1 29.922 0.0 0.0 1.8531 0.0 0.0 1191.524912035125 0.0 1191.524912035125 0.0 7.257724967479856 0.0 0.0 0 0.0 0.0 0.0 0.6109243748081782 NYQ 1.8531 - 144 + 1 1.935 45486.5 0.6200000047683716 2248 3334 5582 DOHH2_400M_050219_2,5584 DOHH2_400M_050219_2,5584,YLMKFYCRCFQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5585 29.363 54.0 1203200.0 25 0 167510.0 + 330 AEAGAGSATEF 11 81 505.72485595580594 1009.435158978412 2 505.7249633669853 MULTI CID FTMS 0 0 0 5582 743280.4375 0.4293539808567665 -1 0.0790367126464843 3 Unmodified _AEAGAGSATEF_ ENSG00000124614|ENST00000648437|RPS10;nc|ENSG00000101278|Q9NQ39|RPS10P5 11.494710602746466 0.7960433852372589 2 [TA]R[YV]TAT 8 8 19.1 0.0 0.0 1.8921 0.0 0.0 0.0 142.95912073061814 142.95912073061814 3.614972756864287 0.0 0.0 0.0 0 0.0 0.585026652029182 0.2614393726401688 0.0 [TA]R[YV]TAT 1.8921 - 314 1 1.935 55439.9 1.0 2249 3334 5582 DOHH2_400M_050219_2,5585 DOHH2_400M_050219_2,5585,AEAGAGSATEF False True AEAGAGSATEF 29.363431 505.724963366985 10236945.0 5582.0 ENSG00000124614|ENST00000648437|RPS10;;nc|ENSG00000101278|Q9NQ39|RPS10P5 4.783912658691406 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5586 29.368 224.0 425580.0 25 0 35885.0 + 7286 EEVDQVARAY 10 95 590.2854640075735 1178.556375081947 2 590.2851440310478 MULTI CID FTMS 0 0 0 5582 386290.25 0.91819477056399 -1 0.0790367126464843 4 Unmodified _EEVDQVARAY_ ENSG00000133028|ENST00000255390|SCO1 86.33184430468982 0.0118786207050641 2 EEVDQVARAY 10 0 + 99.38 0.0 0.0 8.4323 8.4323 92.265 0.0 0.0 0.0 81.05942152858027 12.474250108400469 12.474250108400469 9.164539485499262 0 1.2059771852360797 1.6989700043360187 0.0 0.8494850021680094 + + EEVDQVARAY;EEVD[AG]VARAY;EEVDQV[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};EEVDQV[RH][PA];EEVD[AG]V[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};EEVD[AG]V[RH][PA];[DV]P[PA]VQDV[HC];[DV][HK]VQDV[HC];[DP]V[PA]VQDV[HC];[DV][HK]V[AG]DV[HC] 8.4323;7.6547;6.3212;5.7428;5.5436;4.9652;4.7907;4.3926;4.1872;3.615 +;-;-;-;-;-;-;-;-;- + 404 + 1 1.935 76356.9 1.0 2250 3334 5582 DOHH2_400M_050219_2,5586 DOHH2_400M_050219_2,5586,EEVDQVARAY True True EEVDQVARAY 29.367656 590.285144031048 2372370.5 5582.0 ENSG00000133028|ENST00000255390|SCO1 8.204424063364664 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5587 29.371 151.0 413030.0 25 0 44905.0 + 5164 DIKVKEEQL 9 90 551.3112422390258 1100.6079315448517 2 551.3113281130791 MULTI CID FTMS 0 0 0 5582 381325.5625 1.0 0 0.0 5 Unmodified _DIKVKEEQL_ ENSG00000106443|ENST00000634607|PHF14;ENST00000490957.5_1_7:11013950-11101713:+|nuORF;nc|ENSG00000106443|O94880-1|PHF14 63.960520009940105 0.0238892913700936 2 D{I|L}KV 4 5 63.686 0.0 0.0 5.7864 0.0 0.0 0.0 642.3120821588499 642.3120821588499 45.21652514092061 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.3252574989159953 + D{I|L}KV 5.7864 + + 314 + 1 1.935 53442.7 1.0 2251 3334 5582 DOHH2_400M_050219_2,5587 DOHH2_400M_050219_2,5587,DIKVKEEQL True True DIKVKEEQL 29.370671 551.311328113079 2181795.5 5582.0 ENST00000490957.5_1_7:11013950-11101713:+|nuORF;;ENSG00000106443|ENST00000634607|PHF14;;nc|ENSG00000106443|O94880-1|PHF14 4.553842862447103 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5588 29.373 130.0 544350.0 25 0 62975.0 13087 HEGFHFPYDY 10 78 437.85365746929216 1310.5391430080765 3 437.8532592654228 MULTI CID FTMS 0 0 0 5582 341248.875 0.5568670191054973 -1 0.0790367126464843 6 Unmodified _HEGFHFPYDY_ ENSG00000198018|ENST00000370489|ENTPD7 10.823927491677226 0.6659270209832991 2 {[YC]|[HE]}G{I|L} 4 7 14.398 0.0 0.0 1.0986 0.0 0.0 0.0 871.3089238520796 871.3089238520796 -1.4042438316349877 0.0 -1.4042438316349877 0.0 0 0.0 0.0 0.6861818737241735 0.0 {[YC]|[HE]}G{I|L} 1.0986 - 124 1 1.935 62080.4 1.0 2252 3334 5582 DOHH2_400M_050219_2,5588 DOHH2_400M_050219_2,5588,HEGFHFPYDY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5589 29.377 202.0 487510.0 25 0 59885.0 + 10421 FTDEEGYGRY 10 90 618.7618662022462 1235.5091794712923 2 618.7618896365166 MULTI CID FTMS 0 0 0 5582 319271.21875 0.3481620778960194 -1 0.0790367126464843 7 Unmodified _FTDEEGYGRY_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000446317.1_1_20:3471092-3471287:-|nuORF;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 74.7717668357584 0.0187829169580365 2 {M(Oxidation (M))|F}TDEEYG{[NV]|[RG]}Y 10 2 + 89.342 0.0 0.0 7.2312 7.2312 63.091 0.0 0.0 0.0 75.38927976889755 3.760460414512352 3.760460414512352 0.0 0 1.2302046884880935 0.0 1.274227503252014 1.055462187404089 {M(Oxidation (M))|F}TDEEYG{[NV]|[RG]}Y;{M(Oxidation (M))|F}TDEEGY{[NV]|[RG]}Y;{M(Oxidation (M))|F}TDEEY[RN]Y;{M(Oxidation (M))|F}TDEWY{[NV]|[RG]}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E[K{I|L}]EEDTE;EED[K{I|L}]EEDTE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NKKEEDTE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGKKEEDTE;{M(Oxidation (M))|F}[DV]MEYG{[NV]|[RG]}Y;{M(Oxidation (M))|F}[DV]MEGY{[NV]|[RG]}Y 7.2312;7.2312;6.4392;6.1115;5.6169;5.3092;5.2401;4.4984;4.2315;4.2315 -;+;-;-;-;-;-;-;-;- + 422 + 1 1.935 78100.8 1.0 2253 3334 5582 DOHH2_400M_050219_2,5589 DOHH2_400M_050219_2,5589,FTDEEGYGRY True True FTDEEGYGRY 29.377191 618.761889636517 5058621.5 5582.0 ENST00000446317.1_1_20:3471092-3471287:-|nuORF;;ENST00000470585.5_1_1:38445118-38455637:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 8.315494219462076 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5590 29.381 188.0 408070.0 25 0 30211.0 + 32774 SEDVIARTY 9 93 527.2636334788414 1052.5127140244826 2 527.2641479372978 MULTI CID FTMS 0 0 0 5582 249736.046875 1.0 0 0.0 8 Unmodified _SEDVIARTY_ ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-2|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2 51.41523569358685 0.0372669606867193 2 {[ES]|[DT]|[{I|L}C]}DV{I|L}ARTY 9 0 + 59.606 0.0 0.0 5.6632 5.6632 82.97 0.0 0.0 0.0 41.90904348617437 11.215686636715034 11.215686636715034 6.817496819840656 0 1.7302046884880935 0.0 0.0 0.3252574989159953 + + {[ES]|[DT]|[{I|L}C]}DV{I|L}ARTY;{[ES]|[DT]|[{I|L}C]}D{I|L}VARTY;{[ES]|[DT]|[{I|L}C]}DV{I|L}A[VG]TY;{[ES]|[DT]|[{I|L}C]}D{I|L}VA[VG]TY;[DV]{I|L}[QA]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TY;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TY 5.6632;5.0155;4.4793;3.8316;1.6481;0.21673 +;-;-;-;-;- + 231 + 1 1.935 62532.3 1.0 2254 3334 5582 DOHH2_400M_050219_2,5590 DOHH2_400M_050219_2,5590,SEDVIARTY True True SEDVIARTY 29.380825 527.264147937298 1494404.75 5582.0 nc|ENSG00000024048|Q8IWV8|UBR2;;nc|ENSG00000024048|Q8IWV8-2|UBR2;;ENSG00000024048|ENST00000372901|UBR2 5.463527997334798 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5591 29.383 131.0 812340.0 25 0 67841.0 + 6994 EEIPVSSHY 9 95 530.7512257315492 1059.4878985298983 2 530.7510253787041 MULTI CID FTMS 0 0 0 5582 183566.125 0.0928680045719119 -3 0.2200698852539062 9 Unmodified _EEIPVSSHY_ ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 85.35673624503755 0.0162188719545379 2 EE{I|L}PVSSHY 9 0 + 79.702 0.0 0.0 7.5226 7.5226 96.725 0.0 0.0 0.0 57.025493796586645 11.962724883926654 11.962724883926654 38.2023004737949 0 0.7396518287104438 1.6989700043360187 0.9731975075880328 0.0 + + EE{I|L}PVSSHY;EE{I|L}P[HT][TA]Y;[AG][YN]SVP{I|L}[HC];EE{I|L}Y[Y{I|L}][KC];[HS]S[{I|L}T]Y{I|L}[HC];[HS]SY[{I|L}T]{I|L}[HC];{[ET]|[MV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}T]{I|L}[HC];[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}YGP{I|L}[HC];EEYY{I|L}{I|L}[KC];[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}PGY{I|L}[HC] 7.5226;3.9169;3.0657;2.2869;1.7961;1.4663;1.2328;0.86153;0.48357;0.29328 +;-;-;-;-;-;-;-;-;- + 369 + 1 1.935 85309.7 1.0 2255 3334 5582 DOHH2_400M_050219_2,5591 DOHH2_400M_050219_2,5591,EEIPVSSHY True True EEIPVSSHY 29.3835 530.751025378704 29824473.0 5582.0 ENST00000558825.5_1_15:91337395-91358506:+|nuORF;;ENSG00000197299|ENST00000355112|BLM;;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 8.699800809224447 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5592 29.397 800.0 141880.0 25 0 19452.0 + 10318 FSDPSQQPPSY 11 124 626.776749011697 0 626.7767211794853 PEAK CID FTMS 0 0 0 5582 130718.4375 1.0 0 0.0 10 Unmodified _FSDPSQQPPSY_ ENSG00000071626|ENST00000233078|DAZAP1;ENST00000589874.2_1_19:1434656-1434908:+|nuORF 65.47368725323818 0.0042102756240368 2 PPS 3 8 34.297 0.0 0.0 2.7404 0.0 0.0 789.3268944923663 178.05152307681877 967.378417569185 0.0 0.0 0.0 0.0 0 1.5 0.0 0.6109243748081782 0.0 + PPS 2.7404 + + 327 + 1 1.935 88810.6 0.699999988079071 2256 3334 5582 DOHH2_400M_050219_2,5592 DOHH2_400M_050219_2,5592,FSDPSQQPPSY True True FSDPSQQPPSY 29.397342 626.776721179485 997177.0625 5582.0 ENSG00000071626|ENST00000233078|DAZAP1;;ENST00000589874.2_1_19:1434656-1434908:+|nuORF 8.035754839579264 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5593 29.411 800.0 217640.0 25 0 22747.0 -1 SSHSECVTELY 11 117 656.2770361467027 1310.5395193602053 2 656.2766601443291 MULTI CID FTMS 0 0 0 5582 127192.0625 0.7122065282848276 -1 0.0790367126464843 11 Carbamidomethyl (C) _SSHSEC(Carbamidomethyl (C))VTELY_ ENST00000367450.7_1_1:192998689-192998773:-|nuORF 18.1463463914782 0.6576820063886638 2 GEH{I|L}Y 5 -1 56.102 0.0 0.0 4.2808 0.0 0.0 693.2583485334 0.0 693.2583485334 0.0 37.27289011089418 0.0 0.0 0 1.6861818737241734 0.0 0.7302046884880937 0.0 GEH{I|L}Y 4.2808 - 258 1 1.935 133050.5 0.7099999785423279 2257 3334 5582 DOHH2_400M_050219_2,5593 DOHH2_400M_050219_2,5593,SSHSECVTELY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5594 29.425 800.0 172820.0 25 0 16920.0 + 37517 TLHGRAIL 8 132 440.7715680709176 879.5285832086353 2 440.7722045779228 MULTI CID FTMS 0 0 0 5582 92324.4296875 1.0 0 0.0 12 Unmodified _TLHGRAIL_ ENSG00000169189|ENST00000361439|NSMCE1;ENST00000565070.5_1_16:27237776-27268891:-|nuORF;ENST00000565384.1_1_16:27236480-27241947:-|nuORF;ENST00000569236.5_1_16:27236480-27252833:-|nuORF 32.116972079565 0.368454113111938 2 [{I|L}T][QP]{I|L}{I|L}VP 8 6 + 45.833 0.0 0.0 5.2111 5.2111 86.049 0.0 0.0 0.0 2.1349281074461857 33.35856558192965 2.1349281074461857 11.42159058960253 0 0.2429928190999391 2.0 1.048455006504028 0.3252574989159953 [{I|L}T][QP]{I|L}{I|L}VP;[{I|L}T]{I|L}{I|L}[QP]VP;[RP]W{I|L}{I|L}VP;[VP]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}VP;[TP][Q{I|L}]{I|L}{I|L}VP 5.2111;3.9125;3.6282;2.7631;2.5629 -;-;-;-;- 83 1 1.935 108777.5 0.9700000286102296 2258 3334 5582 DOHH2_400M_050219_2,5594 DOHH2_400M_050219_2,5594,TLHGRAIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5595 29.429 100.0 622770.0 25 0 111740.0 -1 0 82 483.2803832351336 482.2731067685336 1 483.2800170779228 MULTI CID FTMS 0 0 0 5582 238715.390625 0.2477504307558125 -2 0.1507244110107422 13 2 W 1 -1 11.99 0.0 0.0 2.4861 0.0 0.0 278.18240655056326 0.0 278.18240655056326 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.4861 - 12 + 1 1.935 50300.1 1.0 2259 3334 5582 DOHH2_400M_050219_2,5595 DOHH2_400M_050219_2,5595, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5596 29.432 196.0 322200.0 25 0 32162.0 + 14201 IDKLGSQLDL 10 94 367.8761675772866 0 367.8765136599541 PEAK CID FTMS 0 0 0 5582 177430.609375 1.0 0 0.0 14 Unmodified _IDKLGSQLDL_ REV__ENSG00000103994|ENST00000564754|ZNF106;REV__nc|ENSG00000103994|Q9H2Y7|ZNF106 10.073929032068715 0.3742530088597855 2 D 1 -1 6.9897 0.0 0.0 0.95262 0.0 0.0 533.621218355942 82.06698023013905 615.6881985860811 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.95262 + + 7 + 1 1.935 53978.9 1.0 2260 3334 5582 DOHH2_400M_050219_2,5596 DOHH2_400M_050219_2,5596,IDKLGSQLDL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5598 29.442 332.0 214390.0 25 0 24982.0 + -1 YSYMRDYYDRQ 11 96 788.3317372163427 1574.6489214994854 2 788.3317138552666 MULTI CID FTMS 0 0 0 5597 283752.125 0.2749202933922554 2 -0.0978298187255859 1 Oxidation (M) _YSYM(Oxidation (M))RDYYDRQ_ REV__ENSG00000092199|ENST00000553300|HNRNPC;REV__ENST00000556181.1_1_14:58988169-58988316:+|nuORF;REV__nc|ENSG00000092199|P07910-3|HNRNPC;REV__nc|ENSG00000092199|P07910-4|HNRNPC;REV__nc|ENSG00000092199|P07910|HNRNPC 1.3295316138638542 0.8688751186870782 2 [DN]{[CP]|[EA]}YTQQA 9 -1 49.261 0.0 0.0 3.1284 0.0 0.0 0.0 551.2121898923166 551.2121898923166 33.68266143401304 0.0 0.0 0.0 0 0.1435078169319297 1.3010299956639813 1.610924374808178 1.4604093769761874 [DN]{[CP]|[EA]}YTQQA 3.1284 - 2821 1 1.925 56265.4 1.0 2261 3335 5597 DOHH2_400M_050219_2,5598 DOHH2_400M_050219_2,5598,YSYMRDYYDRQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5599 29.444 90.0 810700.0 25 0 124870.0 + 45550 YVDDPYQKY 9 95 595.7721866294712 1189.5298203257423 2 595.7722045779228 MULTI CID FTMS 0 0 0 5597 677502.6875 0.6291797189017259 -2 0.1676349639892578 2 Unmodified _YVDDPYQKY_ ENSG00000132313|ENST00000337109|MRPL35 85.64151623876279 0.0161498729896241 2 YVDDPYQKY 9 0 + 104.31 0.0 0.0 8.7689 8.7689 93.251 0.0 0.0 0.0 79.90926274548464 13.46787486224656 13.46787486224656 9.208187539523747 0 1.524227503252014 2.0 0.0 1.4731975075880328 + + YVDDPYQKY;YVDDPY[AG]KY;YVDDP[WH]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};YV[C(Carbamidomethyl (C))S]{[QD]|[EN]|[WG]|[KD]|[RS]}QKY;YV[C(Carbamidomethyl (C))S][R{M(Oxidation (M))|F}]D{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};YV[C(Carbamidomethyl (C))S]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}K{[WS]|[C(Carbamidomethyl (C)){I|L}]};[KQ]Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[C(Carbamidomethyl (C))S]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 8.7689;7.9948;5.6028;5.5326;3.6443;3.285;0.5742 +;-;-;-;-;-;- + 314 + 1 1.925 58404.3 1.0 2262 3335 5597 DOHH2_400M_050219_2,5599 DOHH2_400M_050219_2,5599,YVDDPYQKY True True YVDDPYQKY 29.443754 595.772204577923 12372073.0 5597.0 ENSG00000132313|ENST00000337109|MRPL35 9.363655090332031 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5600 29.445 63.0 871880.0 25 0 61137.0 + 31749 RSAEEAPLY 9 89 518.2584136070194 1034.5022742808387 2 518.2587768435478 MULTI CID FTMS 0 0 0 5597 486455.28125 1.0 0 0.0 3 Unmodified _RSAEEAPLY_ ENSG00000072135|ENST00000175756|PTPN18;nc|ENSG00000072135|Q99952-2|PTPN18 19.256988751693697 0.3154191944385105 2 {I|L}PY 3 7 30.049 0.0 0.0 2.9047 0.0 0.0 643.2904955716575 0.0 643.2904955716575 0.0 18.94016261540408 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}PY 2.9047 - 88 + 1 1.925 51625.8 1.0 2263 3335 5597 DOHH2_400M_050219_2,5600 DOHH2_400M_050219_2,5600,RSAEEAPLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5601 29.45 269.0 410440.0 25 0 44646.0 + 6154 DSYWRETIC 9 119 586.7569906612671 1171.499428389334 2 586.7570068240166 MULTI CID FTMS 0 0 0 5597 394461.6875 0.328326133594688 -3 0.2393226623535156 4 Unmodified _DSYWRETIC_ ENST00000355557.6_1_12:133682357-133682435:+|nuORF 53.832793166522166 0.0319663582346103 2 [YV]RSDSVY 8 8 60.13 0.0 0.0 5.1328 0.0 0.0 0.0 199.0339825310704 199.0339825310704 39.188295065979446 0.0 0.0 0.0 0 1.174742501084005 1.6989700043360187 0.5994850021680094 0.3494850021680094 [YV]RSDSVY 5.1328 - 786 1 1.925 87077.1 1.0 2264 3335 5597 DOHH2_400M_050219_2,5601 DOHH2_400M_050219_2,5601,DSYWRETIC True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5602 29.454 189.0 357010.0 25 0 48289.0 + 33032 SEPESIRKW 9 86 566.2933402399361 1130.5721275466722 2 566.2933227419853 MULTI CID FTMS 0 0 0 5597 348119.0625 1.0 0 0.0 5 Unmodified _SEPESIRKW_ ENSG00000122705|ENST00000345519|CLTA;nc|ENSG00000122705|P09496-3|CLTA;nc|ENSG00000122705|P09496-4|CLTA;nc|ENSG00000122705|P09496|CLTA 20.580933911654288 0.2795815587326093 2 {[ES]|[DT]|[{I|L}C]}PES{I|L}[RK]W 9 0 + 26.717 0.0 0.0 2.3631 2.3631 80.273 0.0 0.0 0.0 13.221828846315663 0.2018122933698443 0.2018122933698443 26.71667886799576 0 0.4247425010840047 0.0 0.3807196863200844 0.0 + + {[ES]|[DT]|[{I|L}C]}PES{I|L}[RK]W 2.3631 + + 68 + 1 1.925 55677.6 1.0 2265 3335 5597 DOHH2_400M_050219_2,5602 DOHH2_400M_050219_2,5602,SEPESIRKW False True SEPESIRKW 29.453931 566.293322741985 2620406.25 5597.0 ENSG00000122705|ENST00000345519|CLTA;;nc|ENSG00000122705|P09496|CLTA;;nc|ENSG00000122705|P09496-3|CLTA;;nc|ENSG00000122705|P09496-4|CLTA 6.29934549331665 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5603 29.458 187.0 391060.0 25 0 34040.0 + 15766 ISDPGVQGY 9 108 468.22659628323225 934.4386396332644 2 468.2258483767509 MULTI CID FTMS 0 0 0 5597 281508.125 0.8872204740307387 -1 0.0885982513427734 6 Unmodified _ISDPGVQGY_ ENST00000374647.9_1_9:111693343-111696326:-|nuORF 50.855029805455786 0.0384952370514206 2 T[KT]GY 5 7 32.447 0.0 0.0 3.4724 0.0 0.0 366.15325252564577 0.0 366.15325252564577 0.0 15.580824061503977 0.0 0.0 0 0.2614393726401688 0.0 0.7614393726401688 0.0 T[KT]GY 3.4724 - 198 + 1 1.925 61879.8 1.0 2266 3335 5597 DOHH2_400M_050219_2,5603 DOHH2_400M_050219_2,5603,ISDPGVQGY True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5604 29.466 470.0 335090.0 25 0 19705.0 -1 0 164 366.22641587582143 365.21913940922144 1 366.2280151247978 MULTI CID FTMS 0 0 0 5597 225786.953125 1.0 0 0.0 7 2 Y 1 -1 13.979 0.0 0.0 3.8277 0.0 0.0 184.14461350765737 0.0 184.14461350765737 0.0 2.4223742024533568 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.8277 - 19 + 1 1.925 127281.2 1.0 2267 3335 5597 DOHH2_400M_050219_2,5604 DOHH2_400M_050219_2,5604, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5605 29.471 264.0 474070.0 25 0 32778.0 + 25501 NELVSTHGY 9 133 510.2431630102124 1018.4717730872248 2 510.2427856326103 MULTI CID FTMS 0 0 0 5597 219627.46875 0.1358667112281787 -3 0.2393226623535156 8 Unmodified _NELVSTHGY_ ENSG00000105325|ENST00000441788|FZR1;ENST00000586212.1_1_19:3532513-3533660:+|nuORF;nc|ENSG00000105325|Q9UM11-3|FZR1;nc|ENSG00000105325|Q9UM11|FZR1 71.13359017698441 0.0206607516130725 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSTHGY 9 0 + 51.15 0.0 0.0 5.0223 5.0223 78.718 0.0 0.0 0.0 7.147642715192504 5.384994216732004 5.384994216732004 5.384994216732004 0 0.9247425010840048 0.0 0.9049471895720984 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSTHGY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VST{[QN]|[E{I|L}]|[KN]}D;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSHTGY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VS{[{M(Oxidation (M))|F}D]|MM}[VP];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}TH[YK]D;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}TH[VS]GY;[HT]SR{I|L}C(Carbamidomethyl (C))[{M(Oxidation (M))|F}V];[HT]SR{I|L}[CG][{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}[HT]{I|L}[YK]D 5.0223;4.4935;4.336;2.7309;1.8411;1.6957;1.2702;0.36081;0.025121 +;-;-;-;-;-;-;-;- + 776 + 1 1.925 100003.3 1.0 2268 3335 5597 DOHH2_400M_050219_2,5605 DOHH2_400M_050219_2,5605,NELVSTHGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5606 29.476 261.0 292220.0 25 0 45710.0 + 6502 EAITFHMTPV 10 96 382.5267257747888 1144.5583479245663 3 382.5269958376884 MULTI CID FTMS 0 0 0 5597 133969.046875 0.0988074882219522 2 -0.0978298187255859 9 Unmodified _EAITFHMTPV_ REV__ENSG00000159346|ENST00000340990|ADIPOR1;REV__ENST00000495562.5_1_1:202910703-202913132:-|nuORF 6.723162845929126 0.6955379296933136 2 MGK[SG]C 6 -1 22.422 0.0 0.0 1.959 0.0 0.0 200.079441153701 378.22661528210006 578.3060564358011 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 MGK[SG]C 1.959 - 97 + 1 1.925 66399.1 1.0 2269 3335 5597 DOHH2_400M_050219_2,5606 DOHH2_400M_050219_2,5606,EAITFHMTPV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5607 29.489 800.0 140000.0 25 0 5206.6 + -1 LNDLQDKMQF 10 150 634.3032113867092 1266.5918698402184 2 634.2997314333916 MULTI CID FTMS 0 0 0 5597 132798.828125 0.4947703214358898 -4 0.3086681365966797 10 Oxidation (M) _LNDLQDKM(Oxidation (M))QF_ REV__ENSG00000136634|ENST00000423557|IL10 38.17557092003332 0.1768326257063233 2 [AG]{I|L}KEEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 11 -1 + 81.661 0.0 0.0 6.4473 6.4473 85.294 0.0 0.0 0.0 6.517963694660082 16.575773191777927 6.517963694660082 6.517963694660082 0 1.1307196863200843 1.3010299956639813 1.0629529932484498 0.7742275032520141 [AG]{I|L}KEEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KEEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KEEQA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[AG]{I|L}KEE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}EKEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQEEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KEE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KEEQA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[Q{I|L}]EKEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KEE[AG]A{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F} 6.4473;5.9327;5.7266;5.7266;5.5953;5.3797;5.2091;5.2091;5.0806;5.0083 -;-;-;-;-;-;-;-;-;- 2477 1 1.925 88696.9 0.8199999928474426 2270 3335 5597 DOHH2_400M_050219_2,5607 DOHH2_400M_050219_2,5607,LNDLQDKMQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5608 29.498 457.0 144530.0 25 0 9737.4 32544 SAPGAEGLEPP 11 117 512.7510033154637 1023.4874536977272 2 512.7507812380791 MULTI CID FTMS 0 0 0 5597 111652.5390625 1.0 0 0.0 11 Unmodified _SAPGAEGLEPP_ ENSG00000164430|ENST00000370315|CGAS;nc|ENSG00000164430|Q8N884-2|CGAS 12.240655878213236 0.7805268987462184 2 {[SA]|[TG]}DD 4 9 30.758 0.0 0.0 3.0052 0.0 0.0 0.0 632.3414513279138 632.3414513279138 13.767959391884546 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.0 0.0 {[SA]|[TG]}DD 3.0052 - 154 + 1 1.925 54832.4 1.0 2271 3335 5597 DOHH2_400M_050219_2,5608 DOHH2_400M_050219_2,5608,SAPGAEGLEPP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5609 29.504 284.0 422940.0 25 0 99072.0 + -1 YSDCQTSL 8 112 487.20078953084266 972.3870261284852 2 487.2004577517509 MULTI CID FTMS 0 0 0 5597 310298.65625 1.0 0 0.0 12 Carbamidomethyl (C) _YSDC(Carbamidomethyl (C))QTSL_ REV__ENSG00000135862|ENST00000258341|LAMC1;REV__ENST00000479499.1_1_1:183079785-183086097:+|nuORF 16.942295170755138 0.6606234159769251 2 Y[YC(Carbamidomethyl (C))]GTQD 7 -1 29.469 0.0 0.0 3.0305 0.0 0.0 0.0 82.06699548892811 82.06699548892811 9.57789158229879 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 Y[YC(Carbamidomethyl (C))]GTQD 3.0305 - 141 + 1 1.925 96752.9 1.0 2272 3335 5597 DOHH2_400M_050219_2,5609 DOHH2_400M_050219_2,5609,YSDCQTSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5610 29.509 247.0 337140.0 25 0 55373.0 + 7401 EGIVKQDSL 9 114 494.7691080113902 987.5236630895804 2 494.7691223025322 MULTI CID FTMS 0 0 0 5597 173711.734375 0.3026535880626295 -2 0.1676349639892578 13 Unmodified _EGIVKQDSL_ ENSG00000092201|ENST00000216297|SUPT16H 71.92227651296345 0.0203558744033348 2 {[DA]|[EG]}GKS{I|L}V{[DA]|[EG]}{I|L} 10 6 + 42.229 0.0 0.0 4.2762 4.2762 70.075 0.0 0.0 0.0 14.441618056302191 14.16431791798622 14.16431791798622 0.7268250975604218 0 0.0 0.6575773191777937 1.25 0.0 {[DA]|[EG]}GKS{I|L}V{[DA]|[EG]}{I|L};{[DA]|[EG]}GSK{I|L}V{[DA]|[EG]}{I|L};{[DA]|[EG]}GKSV{I|L}{[DA]|[EG]}{I|L};{[DA]|[EG]}GSKV{I|L}{[DA]|[EG]}{I|L};{[DA]|[EG]}{I|L}[SG]KV{[DA]|[EG]}{I|L};{[DA]|[EG]}GS{I|L}KV{[DA]|[EG]}{I|L};{[DA]|[EG]}GKVTV{[DA]|[EG]}{I|L};{[DA]|[EG]}GKVS{I|L}{[DA]|[EG]}{I|L};{[TV]|[{I|L}S]}[NG]S{I|L}V{[DA]|[EG]}{I|L};{[TV]|[{I|L}S]}[NG]SV{I|L}{[DA]|[EG]}{I|L} 4.2762;4.2026;4.0979;4.0243;3.9998;3.7725;3.3166;3.1383;2.8138;2.6355 -;-;-;-;-;-;-;-;-;- 869 1 1.925 68480.2 1.0 2273 3335 5597 DOHH2_400M_050219_2,5610 DOHH2_400M_050219_2,5610,EGIVKQDSL True True EGIVKQDSL 29.508505 494.769122302532 2680778.75 5597.0 ENSG00000092201|ENST00000216297|SUPT16H 4.940700054168701 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5611 29.522 800.0 102050.0 25 0 11987.0 + -1 DNCFMARFY 9 103 612.2518040967265 1222.4890552602528 2 612.2514526247978 MULTI CID FTMS 0 0 0 5597 158971.890625 0.2572478542959138 2 -0.0978298187255859 14 Carbamidomethyl (C) _DNC(Carbamidomethyl (C))FMARFY_ REV__ENSG00000114796|ENST00000242810|KLHL24;REV__ENSG00000172578|ENST00000341319|KLHL6;REV__ENST00000489245.5_1_3:183211997-183273441:-|nuORF;REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24 10.823927491677226 0.5436922275383211 2 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 -1 + 75.935 0.0 0.0 6.2115 6.2115 87.374 0.0 0.0 0.0 5.764837301042718 64.58600389045776 5.764837301042718 9.164539485499262 0 0.9247425010840048 0.0 0.6505149978319906 0.3807196863200844 [HD]EAQQDA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]DA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQDA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[AG]DA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[AG]QDA{M(Oxidation (M))|F}Y;[{M(Oxidation (M))|F}E]G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDA{M(Oxidation (M))|F}Y;[{M(Oxidation (M))|F}E]G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DW{M(Oxidation (M))|F}Y;[PG][WE]Q[C(Carbamidomethyl (C))H]{M(Oxidation (M))|F}Y 6.2115;5.4618;5.4618;4.4037;4.3832;3.6335;3.6335;2.9567;2.1563;1.2594 -;-;-;-;-;-;-;-;-;- 437 1 1.925 65338.8 0.8500000238418579 2274 3335 5597 DOHH2_400M_050219_2,5611 DOHH2_400M_050219_2,5611,DNCFMARFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5613 29.527 61.0 939670.0 25 0 107500.0 37528 TLHPVWSQQ 9 83 548.2834825618476 1094.552412190495 2 548.2827636599541 MULTI CID FTMS 0 0 0 5612 844049.125 0.586294547587033 2 -0.0513896942138671 1 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 12.872603262515298 0.4882369880199512 2 V[PS]HEPPH[VP] 10 9 + 44.627 0.0 0.0 4.0771 4.0771 82.679 0.0 0.0 0.0 32.15227486541373 2.0546874062760168 2.0546874062760168 15.467203307072731 0 1.8935078169319297 0.0 0.3807196863200844 0.0 V[PS]HEPPH[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[{I|L}T]EH[HK];[{I|L}T]H[WH]H[HK];V[PS]H[WH]H[VP];[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}EH[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSE[YV][HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[MS]|[{M(Oxidation (M))|F}A]}[YV][HK];[{I|L}T]H[MD][{I|L}T][HK] 4.0771;2.664;2.6444;2.5912;2.2331;2.0902;0.90264;0.7185 -;-;-;-;-;-;-;- 179 + 1 1.902 49035.2 1.0 2275 3336 5612 DOHH2_400M_050219_2,5613 DOHH2_400M_050219_2,5613,TLHPVWSQQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5614 29.53 160.0 469930.0 25 0 53842.0 + 6031 DSDPDRLTY 9 104 541.2430391770656 1080.4715254209311 2 541.2432128787041 MULTI CID FTMS 0 0 0 5612 522818.28125 0.7763524903887418 -2 0.1784915924072265 2 Unmodified _DSDPDRLTY_ ENST00000532320.5_1_11:771189-774104:-|nuORF 46.4752305370441 0.0480981420502832 2 {[DS]|[MA]|[CV]|TT}DPDR{I|L}TY 9 0 + 47.853 0.0 0.0 4.4289 4.4289 76.572 0.0 0.0 0.0 7.147642715192504 7.621409175999389 7.147642715192504 5.7352282311924085 0 1.8979400086720373 0.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}DPDR{I|L}TY;{[DS]|[MA]|[CV]|TT}DPQ[KQ]TY;[DP]R[TA]EETY;{[DS]|[MA]|[CV]|TT}DP[AG][KQ]TY 4.4289;3.8981;3.7236;3.0459 +;-;-;- + 213 + 1 1.902 65388.2 1.0 2276 3336 5612 DOHH2_400M_050219_2,5614 DOHH2_400M_050219_2,5614,DSDPDRLTY True True DSDPDRLTY 29.530272 541.243212878704 3559572.0 5612.0 ENST00000532320.5_1_11:771189-774104:-|nuORF 8.110594749450684 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5616 29.534 95.0 518050.0 25 0 59225.0 + 37717 TLQFWRCF 8 88 550.7733237764648 1099.5320946197296 2 550.7739135622978 MULTI CID FTMS 0 0 0 5615 541749.625 0.3118560274709804 -3 0.1864280700683593 1 Unmodified _TLQFWRCF_ REV__ENSG00000179593|ENST00000380183|ALOX15B;REV__ENST00000571240.1_1_17:7942473-7945810:+|nuORF;REV__nc|ENSG00000179593|O15296-2|ALOX15B;REV__nc|ENSG00000179593|O15296-3|ALOX15B;REV__nc|ENSG00000179593|O15296-4|ALOX15B 12.531546534597751 0.7257836412119636 2 [{I|L}T][NG]PP{I|L} 7 -1 24.785 0.0 0.0 2.2541 0.0 0.0 0.0 404.1234434904854 404.1234434904854 11.597200695509288 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.3494850021680094 [{I|L}T][NG]PP{I|L} 2.2541 - 180 1 1.902 40286.8 1.0 2277 3337 5615 DOHH2_400M_050219_2,5616 DOHH2_400M_050219_2,5616,TLQFWRCF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5617 29.539 245.0 302510.0 25 0 55510.0 + 32854 SEGYPGQRYY 10 68 610.2727088861099 1218.5308648390196 2 610.2718994021416 MULTI CID FTMS 0 0 0 5615 302314.28125 0.9767424790313082 -1 0.0079364776611328 2 Unmodified _SEGYPGQRYY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 62.57269311338072 0.0298375429882549 2 {[ES]|[DT]|[{I|L}C]}GYPGQ[YR]Y 10 0 + 50.881 0.0 0.0 4.1756 4.1756 78.431 0.0 0.0 0.0 38.40674667758152 2.926740567922444 2.926740567922444 8.697336178426525 0 1.424742501084005 0.0 0.0 0.7302046884880937 + + {[ES]|[DT]|[{I|L}C]}GYPGQ[YR]Y;{[ES]|[DT]|[{I|L}C]}GYPGQ[HV][{M(Oxidation (M))|F}V];{[ES]|[DT]|[{I|L}C]}GYPG[AG][YR]Y;{[ES]|[DT]|[{I|L}C]}GYPG[AG][HV][{M(Oxidation (M))|F}V];{[ES]|[DT]|[{I|L}C]}G[WM]Q[YR]Y;{[ES]|[DT]|[{I|L}C]}[WM]GQ[YR]Y;{[ES]|[DT]|[{I|L}C]}G[WM]Q[HV][{M(Oxidation (M))|F}V];{[ES]|[DT]|[{I|L}C]}[WM]GQ[HV][{M(Oxidation (M))|F}V] 4.1756;3.4618;3.4235;2.3641;1.6507;1.2403;0.93331;0.52298 +;-;-;-;-;-;-;- + 240 + 1 1.902 58557.6 1.0 2278 3337 5615 DOHH2_400M_050219_2,5617 DOHH2_400M_050219_2,5617,SEGYPGQRYY True True SEGYPGQRYY 29.539043 610.271899402142 5669690.0 5615.0 ENSG00000176974|ENST00000316694|SHMT1;;nc|ENSG00000176974|P34896-3|SHMT1;;nc|ENSG00000176974|P34896-2|SHMT1;;ENST00000579558.5_1_17:18243959-18259295:-|nuORF 8.66985273361206 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5618 29.54 41.0 1386600.0 25 0 168190.0 + 26434 NTDSPLRY 8 72 483.2381113576644 964.4616697821288 2 483.2374755740166 MULTI CID FTMS 0 0 0 5615 1148817.375 0.0322669170404494 -6 0.4064979553222656 3 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 58.6788170122104 0.1149141431586871 2 {[QS]|[NT]}DSP{I|L}[YR] 8 0 + 60.182 0.0 0.0 6.24 6.24 93.728 0.0 0.0 0.0 49.72479721008234 10.044321917401078 10.044321917401078 60.18237211568909 0 0.7742275032520141 2.0 0.0 0.3054621874040891 + + {[QS]|[NT]}DSP{I|L}[YR] 6.24 + + 73 + 1 1.902 47416.5 1.0 2279 3337 5615 DOHH2_400M_050219_2,5618 DOHH2_400M_050219_2,5618,NTDSPLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5619 29.542 73.0 879650.0 25 0 117630.0 + 10417 FTATRPGVY 9 96 506.26590420069056 1010.5172554681812 2 506.2655517458916 MULTI CID FTMS 0 0 0 5615 581153.3125 0.4949479760392549 2 -0.077402114868164 4 Unmodified _FTATRPGVY_ ENSG00000198712|ENST00000361739|MT-CO2 36.506200033944 0.094635877243972 2 T[DV]RTATE 8 7 46.389 0.0 0.0 4.5906 0.0 0.0 119.07410628486484 0.0 119.07410628486484 0.0 23.013689551914883 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 T[DV]RTATE 4.5906 - 402 1 1.902 53061.6 1.0 2280 3337 5615 DOHH2_400M_050219_2,5619 DOHH2_400M_050219_2,5619,FTATRPGVY True True FTATRPGVY 29.541943 506.2668 11965706.0 5615.0 ENSG00000198712|ENST00000361739|MT-CO2 6.122345924377441 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5620 29.555 737.0 257220.0 25 0 30971.0 + 43576 YADPVNAHY 9 183 525.2380212152785 1048.461489497357 2 525.2377807497978 MULTI CID FTMS 0 0 0 5615 191829.578125 0.3257709252036471 -5 0.3371524810791015 5 Unmodified _YADPVNAHY_ ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3;nc|ENSG00000119314|O95758|PTBP3 52.268347100219714 0.0353964759249114 2 YADPVNAHY 9 0 + 85.02 0.0 0.0 8.1091 8.1091 92.486 0.0 0.0 0.0 34.09256854528806 11.249387366083 11.249387366083 9.208187539523747 0 0.8494850021680094 2.0 0.3494850021680094 0.0 + + YADPVNAHY;YADPVGGAHY;YADPVNAYH;YADP[RP]DC{I|L};YADPVGGAYH;YADPVNHS{M(Oxidation (M))|F};YADPVN{[QD]|[EN]|[WG]|[KD]|[RS]}Q;YADP[RP]{M(Oxidation (M))|F}SP;YAD{[CA]|SS}[WH]A{I|L};YADPVGGHS{M(Oxidation (M))|F} 8.1091;7.2308;7.0361;6.3744;6.1579;5.9756;5.7002;5.6255;5.2282;5.0974 +;-;-;-;-;-;-;-;-;- + 2802 + 1 1.902 148525.7 1.0 2281 3337 5615 DOHH2_400M_050219_2,5620 DOHH2_400M_050219_2,5620,YADPVNAHY True True YADPVNAHY 29.554724 525.237780749798 7792974.0 5615.0 ENSG00000119314|ENST00000374257|PTBP3;;nc|ENSG00000119314|O95758-4|PTBP3;;nc|ENSG00000119314|O95758-1|PTBP3;;nc|ENSG00000119314|O95758-5|PTBP3;;nc|ENSG00000119314|O95758-7|PTBP3;;nc|ENSG00000119314|O95758|PTBP3;;nc|ENSG00000119314|O95758-2|PTBP3 9.635913213094076 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5621 29.569 800.0 265530.0 25 0 43841.0 15837 ISKVFTLY 8 139 485.784246479324 969.553940025448 2 485.7825805544853 MULTI CID FTMS 0 0 0 5615 168481.796875 1.0 0 0.0 6 Unmodified _ISKVFTLY_ ENST00000537192.1_1_12:5480728-5487080:+|nuORF 19.438996006549623 0.6237395211498085 2 [VG]EVTV 6 6 19.932 0.0 0.0 2.0558 0.0 0.0 0.0 382.2229823440605 382.2229823440605 2.945808987007556 0.0 0.0 0.0 0 0.2302046884880938 1.5228787452803376 0.3807196863200844 0.0 [VG]EVTV 2.0558 - 365 1 1.902 165475.0 0.959999978542328 2282 3337 5615 DOHH2_400M_050219_2,5621 DOHH2_400M_050219_2,5621,ISKVFTLY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5622 29.574 280.0 310890.0 25 0 52587.0 -1 0 83 563.2819280104179 562.2746515438179 1 563.2817260622978 MULTI CID FTMS 0 0 0 5615 228205.9375 0.5256249155159683 -2 0.0978298187255859 7 2 {I|L}Q 2 -1 18.315 0.0 0.0 3.2574 0.0 0.0 303.1204226824299 0.0 303.1204226824299 0.0 6.532732314793517 0.0 0.0 0 0.0 0.0 0.0 0.1861818737241735 {I|L}Q 3.2574 - 32 + 1 1.902 70361.8 1.0 2283 3337 5615 DOHH2_400M_050219_2,5622 DOHH2_400M_050219_2,5622, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5624 29.589 797.0 273430.0 25 0 25991.0 + 17442 KNKQKFVL 8 177 502.816325190587 1003.618097447974 2 502.8165161013603 MULTI CID FTMS 0 0 0 5623 161207.953125 0.9049478032582934 1 -0.0339488983154296 1 Unmodified _KNKQKFVL_ ENSG00000169679|ENST00000302759|BUB1;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 64.23631603340823 0.116217441302575 2 GNKQK{M(Oxidation (M))|F}V{I|L} 8 1 45.269 0.0 0.0 4.5106 0.0 0.0 71.07437331367343 0.0 71.07437331367343 0.0 31.28959170201766 0.0 0.0 0 1.735728081578814 0.0 0.0 1.035666875892183 GNKQK{M(Oxidation (M))|F}V{I|L} 4.5106 - 677 1 1.902 168122.3 1.0 2284 3338 5623 DOHH2_400M_050219_2,5624 DOHH2_400M_050219_2,5624,KNKQKFVL True True KNKQKFVL 29.589424 502.81651610136 1004536.5625 5623.0 nc|ENSG00000169679|O43683-2|BUB1;;ENSG00000169679|ENST00000302759|BUB1;;nc|ENSG00000169679|O43683-3|BUB1 5.131764570871989 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5625 29.594 233.0 483380.0 25 0 103470.0 22293 LPSAFHIL 8 99 449.2616293140044 896.5087056948088 2 449.2613098025322 MULTI CID FTMS 0 0 0 5623 345113.1875 0.0839405269675393 -4 0.2298812866210937 2 Unmodified _LPSAFHIL_ ENST00000417775.5_1_1:75184899-75184968:-|nuORF 26.34127834903884 0.4900704351052977 2 {I|L}PG 3 6 46.387 0.0 0.0 5.1742 0.0 0.0 0.0 626.3276461236936 626.3276461236936 39.39748932436905 0.0 0.0 0.0 0 0.6694451763165201 1.6989700043360187 0.0 0.0 {I|L}PG 5.1742 - 98 + 1 1.902 89910.6 1.0 2285 3338 5623 DOHH2_400M_050219_2,5625 DOHH2_400M_050219_2,5625,LPSAFHIL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5626 29.608 800.0 92096.0 25 0 3696.8 + 32859 SEHPSINKQEW 11 113 677.8239653162764 1353.6333776993526 2 677.8229247927666 MULTI CID FTMS 0 0 0 5623 114420.6328125 1.0 0 0.0 3 Unmodified _SEHPSINKQEW_ ENSG00000165684|ENST00000684778|SNAPC4 30.7034409873982 0.3712764582118616 2 {[ES]|[DT]|[{I|L}C]}H{[CT]|[{M(Oxidation (M))|F}G]}EQ 7 7 21.445 0.0 0.0 1.5843 0.0 0.0 0.0 536.2853487604124 536.2853487604124 8.25772044070131 0.0 0.0 0.0 0 0.7215141619232908 0.0 0.3494850021680094 0.8807196863200843 {[ES]|[DT]|[{I|L}C]}H{[CT]|[{M(Oxidation (M))|F}G]}EQ 1.5843 - 183 + 1 1.902 58839.7 0.9399999976158142 2286 3338 5623 DOHH2_400M_050219_2,5626 DOHH2_400M_050219_2,5626,SEHPSINKQEW False True SEHPSINKQEW 29.607632 677.822924792767 1109130.125 5623.0 ENSG00000165684|ENST00000684778|SNAPC4 3.015197515487671 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5628 29.615 216.0 361570.0 25 0 51849.0 -1 ECKECRKCFY 10 108 711.8001592484461 1421.585765563692 2 711.8004638552666 MULTI CID FTMS 0 0 0 5627 477405.6875 0.218523183767958 6 -0.340616226196289 1 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFY_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 10.823927491677226 0.6659270209832991 2 {[DA]|[EG]}G[HA]EAGAQDA{M(Oxidation (M))|F}Y 14 -1 + 84.042 0.0 0.0 5.9119 5.9119 76.459 0.0 0.0 0.0 5.364515524696117 11.504697682456351 5.364515524696117 0.6472532963665572 0 1.1822333069283657 1.0457574905606752 0.6747425010840047 1.1861818737241734 {[DA]|[EG]}G[HA]EAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}G[HA]EAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}[HQ]EAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}[HQ]EAQQDA{M(Oxidation (M))|F}Y;[HD]EAQAGAQDA{M(Oxidation (M))|F}Y;[HD]EAQAQQDA{M(Oxidation (M))|F}Y;[QA]HDEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}G[HA]EAGADQA{M(Oxidation (M))|F}Y;[QA]HDEAQQDA{M(Oxidation (M))|F}Y;[HD][QA]EAGAQDA{M(Oxidation (M))|F}Y 5.9119;5.8663;5.6546;5.6109;5.5345;5.4908;5.4591;5.4323;5.4154;5.4106 -;-;-;-;-;-;-;-;-;- 3318 1 1.882 60246.2 1.0 2287 3339 5627 DOHH2_400M_050219_2,5628 DOHH2_400M_050219_2,5628,ECKECRKCFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5629 29.629 780.0 118890.0 25 0 11465.0 -1 0 87 638.9148918546285 2551.630461552114 4 639.1661254763603 MULTI CID FTMS 0 0 0 5627 184907.34375 1.0 0 0.0 2 2 NN 2 -1 20.969 0.0 0.0 0.82179 0.0 0.0 2305.5198694378587 0.0 2305.5198694378587 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 NN 0.82179 - 48 1 1.882 72717.8 1.0 2288 3339 5627 DOHH2_400M_050219_2,5629 DOHH2_400M_050219_2,5629, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5630 29.63 71.0 1342700.0 25 0 529870.0 30578 RERSPAPP 8 69 455.2488394684892 0 455.2487060427666 PEAK CID FTMS 0 0 0 5627 217560.0 0.7853988590489548 2 -0.1147136688232421 3 Unmodified _RERSPAPP_ ENSG00000116604|ENST00000348159|MEF2D;nc|ENSG00000116604|Q14814-2|MEF2D;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D;nc|ENSG00000116604|Q14814-6|MEF2D 2.889219685676258 0.5898224805723975 2 H 1 8 6.9897 0.0 0.0 0.76938 0.0 0.0 229.0692389481198 539.3322237604124 768.4014627085321 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.76938 - 11 + 1 1.882 78700.0 1.0 2289 3339 5627 DOHH2_400M_050219_2,5630 DOHH2_400M_050219_2,5630,RERSPAPP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5631 29.644 800.0 300800.0 25 0 28773.0 + 10359 FSLGSLFYY 9 240 366.1847726283522 1095.5324884852566 3 366.1845275759697 MULTI CID FTMS 0 0 0 5627 112416.109375 1.0 0 0.0 4 Unmodified _FSLGSLFYY_ REV__nc|ENSG00000181214|Q6IF36|OR8G2P 11.640296217721598 0.521594087909532 2 {I|L}{I|L}Y 3 -1 22.92 0.0 0.0 2.0921 0.0 0.0 688.2900441649188 0.0 688.2900441649188 0.0 9.424712680444358 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}{I|L}Y 2.0921 - 180 1 1.882 188223.7 0.6399999856948853 2290 3339 5627 DOHH2_400M_050219_2,5631 DOHH2_400M_050219_2,5631,FSLGSLFYY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5632 29.658 800.0 177960.0 25 0 39323.0 8440 ESLYFEDED 9 134 573.7253806551681 1145.4362083771362 2 573.7258178591728 MULTI CID FTMS 0 0 0 5627 97593.296875 1.0 0 0.0 5 Unmodified _ESLYFEDED_ ENSG00000138593|ENST00000559471|SECISBP2L 11.640296217721598 0.521594087909532 2 {[ES]|[DT]|[{I|L}C]}{I|L}D 4 5 31.783 0.0 0.0 2.7747 0.0 0.0 0.0 698.2304602172455 698.2304602172455 19.30864139034512 0.0 0.0 0.0 0 0.5 0.6777807052660807 0.3807196863200844 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}D 2.7747 - 387 + 1 1.882 108873.6 0.8799999952316284 2291 3339 5627 DOHH2_400M_050219_2,5632 DOHH2_400M_050219_2,5632,ESLYFEDED False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5633 29.672 800.0 220200.0 25 0 50679.0 41079 VNFFPVAKTL 10 190 379.2222556618248 0 379.2221862673759 PEAK CID FTMS 0 0 0 5627 94465.1328125 1.0 0 0.0 6 Unmodified _VNFFPVAKTL_ ENST00000467838.2_1_9:139335515-139335683:-|nuORF 5.731851221503515 0.3961065659209837 2 C(Carbamidomethyl (C)) 1 10 6.9897 0.0 0.0 0.92404 0.0 0.0 127.0726718687684 466.3051241510376 593.3777960198059 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.92404 - 12 + 1 1.882 139174.6 0.6200000047683716 2292 3339 5627 DOHH2_400M_050219_2,5633 DOHH2_400M_050219_2,5633,VNFFPVAKTL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5634 29.685 800.0 146290.0 25 0 7076.5 7894 ELNNRFEQITN 11 130 689.342236943519 1376.6699209538378 2 689.3411743044853 MULTI CID FTMS 0 0 0 5627 95413.4453125 0.70249454187028 1 -0.0779361724853515 7 Unmodified _ELNNRFEQITN_ ENSG00000178177|ENST00000635767|LCORL 21.59015148037692 0.5852593066373742 2 {[QV]|[N{I|L}]|[RA]|[KV]}E{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}QS 11 8 + 19.486 0.0 0.0 1.4154 1.4154 71.022 0.0 0.0 0.0 0.5455448770323272 4.551920123186234 0.5455448770323272 6.237577350063786 0 1.2302046884880935 0.0 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}E{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}QS;[Q{I|L}]D{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}QS;GG{I|L}E{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}QS;[RP]C{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}QS;{[ES]|[DT]|[{I|L}C]}{I|L}W[WE]{[TV]|[{I|L}S]}{I|L}QS 1.4154;0.96233;0.95064;0.81975;0.19847 -;-;-;-;- 424 1 1.882 85191.0 0.8500000238418579 2293 3339 5627 DOHH2_400M_050219_2,5634 DOHH2_400M_050219_2,5634,ELNNRFEQITN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5636 29.695 331.0 377060.0 25 0 27307.0 + 6995 EEIPVSSHY 9 119 530.7512257315492 1059.4878985298983 2 530.7512084841728 MULTI CID FTMS 0 0 0 5635 263327.375 0.1332200473557393 3 -0.1088981628417968 1 Unmodified _EEIPVSSHY_ ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 57.47134341890925 0.0274820932774257 2 EE{I|L}PVSSHY 9 0 + 68.911 0.0 0.0 6.5042 6.5042 86.961 0.0 0.0 0.0 19.62189282359297 8.129133566428557 8.129133566428557 8.129133566428557 0 0.5 1.3979400086720375 0.6109243748081782 0.0 + + EE{I|L}PVSSHY;EE{I|L}PVSSYH;EE{I|L}PVS[C(Carbamidomethyl (C))N]{I|L};[VP]E{[YC]|[HE]}P{I|L}[HC];EE{I|L}P[HT][TA]Y;[DP]{I|L}{[YC]|[HE]}P{I|L}[HC];[{I|L}P]D{[YC]|[HE]}P{I|L}[HC];[HS]S[{I|L}T]Y{I|L}[HC];{[WN]|[YH]}[YK]P{I|L}[HC];[{I|L}P][WE]Y{I|L}[HC] 6.5042;5.7369;4.0174;3.2861;3.1682;1.9388;1.8498;1.1957;1.1916;1.1661 +;-;-;-;-;-;-;-;-;- + 417 + 1 1.864 102386.3 1.0 2294 3340 5635 DOHH2_400M_050219_2,5636 DOHH2_400M_050219_2,5636,EEIPVSSHY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5637 29.696 23.0 2174500.0 25 0 232980.0 + 11195 GENDRGVSF 9 75 490.7252006447551 979.4358483563102 2 490.7250549197197 MULTI CID FTMS 0 0 0 5635 2049998.375 0.3434696976132271 -3 0.1553382873535156 2 Unmodified _GENDRGVSF_ ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000462832.5_1_2:29006774-29038903:+|nuORF;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532279.1_1_11:67166350-67167062:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC 40.23920728925047 0.0741434193262949 2 {[DA]|[EG]}NDRRS 7 3 38.191 0.0 0.0 3.8993 0.0 0.0 0.0 162.0566347711547 162.0566347711547 11.24053193658746 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.3252574989159953 0.0 {[DA]|[EG]}NDRRS 3.8993 - 54 + 1 1.864 44341.2 1.0 2295 3340 5635 DOHH2_400M_050219_2,5637 DOHH2_400M_050219_2,5637,GENDRGVSF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5638 29.7 206.0 427480.0 25 0 69464.0 + 37434 TLDENPGVRY 10 93 582.288249484826 1162.561946036452 2 582.2885009646416 MULTI CID FTMS 0 0 0 5635 352450.5625 0.2942473053027984 -3 0.1553382873535156 3 Unmodified _TLDENPGVRY_ ENSG00000116266|ENST00000370008|STXBP3 70.33199760932243 0.018925923965799 2 T{I|L}DENPGV[YR] 10 0 + 100.21 0.0 0.0 8.62 8.62 92.421 0.0 0.0 0.0 87.69585969540586 7.403405327429411 7.403405327429411 9.164539485499262 0 0.9247425010840048 2.0 0.805462187404089 1.1307196863200843 + + T{I|L}DENPGV[YR];T{I|L}DEGGPGV[YR];T{I|L}DENY{[NV]|[RG]}[VP];T{I|L}DEGGY{[NV]|[RG]}[VP];T{I|L}Y[YE]GV[YR];{NN|[MP]|[D{I|L}]|[EV]}[HK]PNED[VP];T{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}NHV[YR];T{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TD[VP];T{I|L}D[C(Carbamidomethyl (C))K][HA][YR];T{I|L}Y[Y{I|L}][DG][YR] 8.62;7.8317;7.0522;6.2639;5.1111;4.4948;4.4414;4.2078;3.8923;3.7572 +;-;-;-;-;-;-;-;-;- + 590 + 1 1.864 68449.9 1.0 2296 3340 5635 DOHH2_400M_050219_2,5638 DOHH2_400M_050219_2,5638,TLDENPGVRY True True TLDENPGVRY 29.700021 582.288500964642 7637437.5 5635.0 ENSG00000116266|ENST00000370008|STXBP3 7.658359050750732 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5639 29.714 800.0 50195.0 25 0 2713.8 -1 0 93 640.0459535978039 2556.154708524816 4 640.0466796755791 MULTI CID FTMS 0 0 0 5635 88653.8046875 0.4766025299102797 6 -0.3832836151123047 4 2 {I|L}PK 3 -1 13.645 0.0 0.0 0.53382 0.0 0.0 2199.911435675009 0.0 2199.911435675009 0.0 0.5462187404089072 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}PK 0.53382 - 98 + 1 1.864 34922.0 0.7799999713897705 2297 3340 5635 DOHH2_400M_050219_2,5639 DOHH2_400M_050219_2,5639, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5640 29.722 474.0 350820.0 25 0 32783.0 + 37476 TLFFFLLLS 9 179 367.5526124175033 1099.63600785271 3 367.5526611208916 MULTI CID FTMS 0 0 0 5635 138730.65625 0.573374200982376 -3 0.1553382873535156 5 Unmodified _TLFFFLLLS_ REV__ENSG00000129009|ENST00000249842|ISLR 11.640296217721598 0.521594087909532 2 S{I|L} 2 -1 18.06 0.0 0.0 1.6423 0.0 0.0 881.5082898124741 0.0 881.5082898124741 0.0 4.080306233405295 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 S{I|L} 1.6423 - 620 + 1 1.864 129787.9 1.0 2298 3340 5635 DOHH2_400M_050219_2,5640 DOHH2_400M_050219_2,5640,TLFFFLLLS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5642 29.727 128.0 459030.0 25 0 43911.0 + 25502 NELVSTHGY 9 95 510.2431630102124 1018.4717730872248 2 510.2433959841728 MULTI CID FTMS 0 0 0 5641 439924.6875 0.272147745538816 3 -0.1152515411376953 1 Unmodified _NELVSTHGY_ ENSG00000105325|ENST00000441788|FZR1;ENST00000586212.1_1_19:3532513-3533660:+|nuORF;nc|ENSG00000105325|Q9UM11-3|FZR1;nc|ENSG00000105325|Q9UM11|FZR1 52.268347100219714 0.0353964759249114 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSHGTY 9 2 + 37.629 0.0 0.0 3.6947 3.6947 80.768 0.0 0.0 0.0 24.134344747112387 6.241757204421468 6.241757204421468 12.507248773525856 0 0.9247425010840048 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSHGTY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VSH{[CA]|SS}{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VS[{M(Oxidation (M))|F}V][DP];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V[W{M(Oxidation (M))|F}][DP] 3.6947;2.4666;2.0502;1.8826 -;-;-;- 199 + 1 1.864 49122.2 1.0 2299 3341 5641 DOHH2_400M_050219_2,5642 DOHH2_400M_050219_2,5642,NELVSTHGY True True NELVSTHGY 29.726939 510.243395984173 23919120.0 5641.0 ENST00000586212.1_1_19:3532513-3533660:+|nuORF;;nc|ENSG00000105325|Q9UM11|FZR1;;ENSG00000105325|ENST00000441788|FZR1;;nc|ENSG00000105325|Q9UM11-3|FZR1 8.46115748087565 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5643 29.737 566.0 259350.0 25 0 22986.0 + 6155 DSYWRETIC 9 136 586.7569906612671 1171.499428389334 2 586.7578002810478 MULTI CID FTMS 0 0 0 5641 222743.359375 0.1853981471077234 3 -0.1152515411376953 2 Unmodified _DSYWRETIC_ ENST00000355557.6_1_12:133682357-133682435:+|nuORF 38.17557092003332 0.0854718145212029 2 {[DS]|[MA]|[CV]|TT}YWRM{[DS]|[MA]|[CV]|TT}{I|L} 9 3 + 56.594 0.0 0.0 4.8309 4.8309 79.109 0.0 0.0 0.0 6.447792777065615 6.447792777065615 6.447792777065615 6.447792777065615 0 1.7302046884880935 0.0 1.5189301784845295 0.0 {[DS]|[MA]|[CV]|TT}YWRM{[DS]|[MA]|[CV]|TT}{I|L};{[DS]|[MA]|[CV]|TT}YVSD{[WS]|[C(Carbamidomethyl (C)){I|L}]}T{I|L};[Y{I|L}]E{[QS]|[NT]}SM{[DS]|[MA]|[CV]|TT}{I|L};{[DS]|[MA]|[CV]|TT}YW[VG]M{[DS]|[MA]|[CV]|TT}{I|L};{[DS]|[MA]|[CV]|TT}YWDS[VS]T{I|L};[Y{I|L}][QT]DSM{[DS]|[MA]|[CV]|TT}{I|L};{[{M(Oxidation (M))|F}C]|[YS]}DWRM{[DS]|[MA]|[CV]|TT}{I|L};[Y{I|L}][C(Carbamidomethyl (C))D]RM{[DS]|[MA]|[CV]|TT}{I|L};{[DS]|[MA]|[CV]|TT}YV{[C(Carbamidomethyl (C))E]|[WC]}[VS]T{I|L};{[DS]|[MA]|[CV]|TT}YSVD{[WS]|[C(Carbamidomethyl (C)){I|L}]}T{I|L} 4.8309;4.2805;4.1517;4.0449;3.9555;3.8376;3.8146;3.6252;3.5538;3.4416 -;-;-;-;-;-;-;-;-;- 968 1 1.864 110339.8 1.0 2300 3341 5641 DOHH2_400M_050219_2,5643 DOHH2_400M_050219_2,5643,DSYWRETIC True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5644 29.751 800.0 131110.0 25 0 16629.0 + 45551 YVDDPYQKY 9 124 595.7721866294712 1189.5298203257423 2 595.7723876833916 MULTI CID FTMS 0 0 0 5641 165076.09375 0.153302019577627 4 -0.2259025573730468 3 Unmodified _YVDDPYQKY_ ENSG00000132313|ENST00000337109|MRPL35 62.57269311338072 0.0246576765497938 2 YVDDPYQKY 9 0 + 98.313 0.0 0.0 8.2649 8.2649 92.729 0.0 0.0 0.0 78.13608784304506 14.973024840566469 14.973024840566469 9.208187539523747 0 0.7742275032520141 2.0 0.0 1.6237125054200234 + + YVDDPYQKY;YVDDPY[AG]KY;YVDDPY[YK]Q;YVDD{[CA]|SS}[{I|L}T]KY;YV[C(Carbamidomethyl (C))S]{[QD]|[EN]|[WG]|[KD]|[RS]}QKY;YVDDP[KP]DNQ;YVD{[C(Carbamidomethyl (C))E]|[WC]}[{I|L}T]KY;YVDDYY[KP]Q;YVDDP[DN][KP]Q;YVDDP[KP]DGGQ 8.2649;7.4908;6.4134;5.9552;5.5552;5.3359;5.049;4.9829;4.9444;4.5654 +;-;-;-;-;-;-;-;-;- + 527 + 1 1.864 81931.8 0.8500000238418579 2301 3341 5641 DOHH2_400M_050219_2,5644 DOHH2_400M_050219_2,5644,YVDDPYQKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5645 29.765 800.0 274650.0 25 0 39492.0 + 14641 IIKKLGGSL 9 157 464.8133940320369 927.6122351308738 2 464.8128539919853 MULTI CID FTMS 0 0 0 5641 156840.328125 0.5057772632892625 -2 0.1147136688232421 4 Unmodified _IIKKLGGSL_ ENSG00000166226|ENST00000299300|CCT2;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2 51.629811660486645 0.0367964933207742 2 {I|L}{I|L}KK{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L} 8 2 + 77.943 0.0 0.0 8.4025 8.4025 83.895 0.0 0.0 0.0 36.40978057358332 13.436644158506311 13.436644158506311 1.9196282343595783 0 1.1237125054200234 2.0 1.0994850021680094 0.3807196863200844 {I|L}{I|L}KK{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{I|L}{I|L}KK{[DA]|[EG]}K{I|L};{I|L}{I|L}KK{[VA]|[{I|L}G]}GS{I|L};{I|L}{I|L}KK[VS]Q{I|L};{I|L}{I|L}K{[QS]|[NT]}VK{I|L};{I|L}{I|L}{I|L}{[ET]|[MV]}VK{I|L};{I|L}{I|L}KK[VS]{I|L}Q;{I|L}{I|L}KK[VS][AG]{I|L};{I|L}{I|L}KK{[DA]|[EG]}{I|L}K;{I|L}{I|L}KK{[VA]|[{I|L}G]}EK 8.4025;8.1956;8.0722;7.9912;7.733;7.5418;6.954;6.81;6.5615;6.1192 -;-;+;-;-;-;-;-;-;- + 1016 + 1 1.864 170682.2 0.75 2302 3341 5641 DOHH2_400M_050219_2,5645 DOHH2_400M_050219_2,5645,IIKKLGGSL True True IIKKLGGSL 29.764525 464.812853991985 1484798.875 5641.0 nc|ENSG00000166226|P78371-2|CCT2;;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;;ENSG00000166226|ENST00000299300|CCT2 2.3219919999440517 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5647 29.775 389.0 131770.0 25 0 12126.0 + -1 NMIVMYRLP 9 94 576.7987524784713 1151.5829520237426 2 576.8018676638603 MULTI CID FTMS 0 0 0 5646 158963.21875 0.506798075435339 -1 0.0422706604003906 1 Oxidation (M) _NM(Oxidation (M))IVMYRLP_ REV__ENSG00000196184|ENST00000423932|OR10J1;REV__nc|ENSG00000196184|P30954|OR10J1 7.289230182591677 0.6602208344931196 2 TDS[R{I|L}]PY 7 -1 18.46 0.0 0.0 1.603 0.0 0.0 301.15870993565505 0.0 301.15870993565505 0.0 8.217969668064882 0.0 0.0 0 0.0 0.0 0.0 0.0 TDS[R{I|L}]PY 1.603 - 59 + 1 1.848 45324.8 1.0 2303 3342 5646 DOHH2_400M_050219_2,5647 DOHH2_400M_050219_2,5647,NMIVMYRLP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5648 29.789 800.0 132190.0 25 0 14368.0 + -1 NEQYESCVIEY 11 129 717.2954692972627 1432.5763856613253 2 717.7996093630791 MULTI CID FTMS 0 0 0 5646 105148.9765625 0.7749076638832929 -1 0.0422706604003906 2 Carbamidomethyl (C) _NEQYESC(Carbamidomethyl (C))VIEY_ REV__ENSG00000249242|ENST00000449862|TMEM150C;REV__nc|ENSG00000249242|B9EJG8-2|TMEM150C 4.897010918128616 0.8520435188433833 2 {[DA]|[EG]}G[YG]EAQQDA 11 -1 56.066 0.0 0.0 3.9136 0.0 0.0 0.0 324.10918167567 324.10918167567 38.10721355240094 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.6747425010840047 0.6421590589602533 {[DA]|[EG]}G[YG]EAQQDA 3.9136 - 1727 1 1.848 75734.9 0.7799999713897705 2304 3342 5646 DOHH2_400M_050219_2,5648 DOHH2_400M_050219_2,5648,NEQYESCVIEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5649 29.791 98.0 722990.0 25 0 74980.0 + 29113 QERDPSKIKW 10 81 429.5668913896544 1285.678844769163 3 429.5666992068291 MULTI CID FTMS 0 0 0 5646 342831.84375 0.9215248670836282 -1 0.0422706604003906 3 Unmodified _QERDPSKIKW_ ENSG00000111640|ENST00000229239|GAPDH;nc|ENSG00000111640|P04406-2|GAPDH 17.04857598603903 0.5614834650426465 2 PSK{I|L}KW 6 4 27.224 0.0 0.0 2.1175 0.0 0.0 528.2283477167588 0.0 528.2283477167588 0.0 16.739573281665486 0.0 0.0 0 0.5 0.0 0.0 0.3252574989159953 + PSK{I|L}KW 2.1175 + + 55 + 1 1.848 62637.5 1.0 2305 3342 5646 DOHH2_400M_050219_2,5649 DOHH2_400M_050219_2,5649,QERDPSKIKW False True QERDPSKIKW 29.790881 429.566699206829 1923863.25 5646.0 nc|ENSG00000111640|P04406-2|GAPDH;;ENSG00000111640|ENST00000229239|GAPDH 5.946703433990479 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5650 29.794 179.0 331910.0 25 0 53129.0 -1 0 92 516.301402849949 515.294126383349 1 516.3011962771416 MULTI CID FTMS 0 0 0 5646 203530.734375 0.0696277783403415 10 -0.7682323455810547 4 2 Q 1 -1 17.491 0.0 0.0 3.3944 0.0 0.0 369.22437648276144 0.0 369.22437648276144 0.0 5.272861173562671 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 Q 3.3944 - 16 + 1 1.848 50545.8 1.0 2306 3342 5646 DOHH2_400M_050219_2,5650 DOHH2_400M_050219_2,5650, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5652 29.799 1.7 27298000.0 25 0 2169700.0 + 26435 NTDSPLRY 8 77 483.2381113576644 964.4616697821288 2 483.2382690310478 MULTI CID FTMS 0 0 0 5651 35603568.0 1.0 0 0.0 1 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 58.6788170122104 0.1149141431586871 2 {[QS]|[NT]}DSP{I|L}RY 8 0 + 72.551 0.0 0.0 7.5225 7.5225 97.351 0.0 0.0 0.0 60.95748238089553 13.89262608244995 13.89262608244995 72.55127619401759 0 0.75 2.0 0.4247425010840047 0.3807196863200844 + + {[QS]|[NT]}DSP{I|L}RY 7.5225 + + 122 + 1 1.848 43140.1 1.0 2307 3343 5651 DOHH2_400M_050219_2,5652 DOHH2_400M_050219_2,5652,NTDSPLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5653 29.8 45.0 1078600.0 25 0 137930.0 + 23646 LTQSMPSHTV 10 92 550.7733237764648 1099.5320946197296 2 550.7733032107353 MULTI CID FTMS 0 0 0 5651 1196134.25 0.6885499469002504 3 -0.2743854522705078 2 Unmodified _LTQSMPSHTV_ REV__ENSG00000078053|ENST00000356264|AMPH;REV__nc|ENSG00000078053|P49418-2|AMPH 18.1463463914782 0.5430639438673815 2 [{I|L}T]{[ET]|[MV]}[KS]QMY 9 -1 + 28.291 0.0 0.0 2.573 2.573 70.049 0.0 0.0 0.0 4.2023301214685205 2.9255153000884384 2.9255153000884384 4.2023301214685205 0 0.218765315847925 2.0 0.3252574989159953 0.5 [{I|L}T]{[ET]|[MV]}[KS]QMY;[{I|L}P]K[YT]GQMY;[{I|L}P]K[YT]G[AG]MY;[{I|L}P]N{[SA]|[TG]}P{[C(Carbamidomethyl (C))E]|[WC]}{[NV]|[RG]} 2.573;2.1908;1.3534;0.26573 -;-;-;- 251 1 1.848 43127.1 1.0 2308 3343 5651 DOHH2_400M_050219_2,5653 DOHH2_400M_050219_2,5653,LTQSMPSHTV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5654 29.802 88.0 551390.0 25 0 94694.0 + 43577 YADPVNAHY 9 73 525.2380212152785 1048.461489497357 2 525.2375976443291 MULTI CID FTMS 0 0 0 5651 469618.5 0.7975206677359153 1 -0.043130874633789 3 Unmodified _YADPVNAHY_ ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3;nc|ENSG00000119314|O95758|PTBP3 32.30548876998284 0.1201446275138228 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPVNAHY 9 0 + 69.587 0.0 0.0 6.6371 6.6371 89.498 0.0 0.0 0.0 42.164537177296495 10.597718523607966 10.597718523607966 9.208187539523747 0 0.8494850021680094 2.0 0.0 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPVNAHY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPVGGAHY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DP[RP]DC{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[RP]PD{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}{[WT]|[RM]}VPD{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YV]{[QG]|[NA]}[WY] 6.6371;5.7588;4.6288;4.19;2.7131;1.2745 +;-;-;-;-;- + 194 + 1 1.848 43055.6 1.0 2309 3343 5651 DOHH2_400M_050219_2,5654 DOHH2_400M_050219_2,5654,YADPVNAHY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5655 29.804 126.0 1381500.0 25 0 599200.0 37529 TLHPVWSQQ 9 95 548.2834825618476 1094.552412190495 2 548.2834350466728 MULTI CID FTMS 0 0 0 5651 424924.5 0.2951616323115626 9 -0.7383823394775391 4 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 17.44264345198275 0.3645313841742926 2 {[QN]|[E{I|L}]|[KN]}NWWR 6 7 28.958 0.0 0.0 2.6456 0.0 0.0 0.0 207.11443506412343 207.11443506412343 2.6755219110667348 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}NWWR 2.6456 - 245 + 1 1.848 137143.5 1.0 2310 3343 5651 DOHH2_400M_050219_2,5655 DOHH2_400M_050219_2,5655,TLHPVWSQQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5656 29.81 282.0 290030.0 25 0 18620.0 28958 QDGETELLL 9 133 509.2578040502391 1016.5010551672782 2 509.7568237185478 MULTI CID FTMS 0 0 0 5651 178266.78125 1.0 0 0.0 5 Unmodified _QDGETELLL_ ENSG00000005844|ENST00000356798|ITGAL;nc|ENSG00000005844|P20701-2|ITGAL;nc|ENSG00000005844|P20701-3|ITGAL 25.399314129420983 0.2080152500878129 2 {M(Oxidation (M))|F}TY 3 8 26.381 0.0 0.0 2.5953 0.0 0.0 587.3512271416907 0.0 587.3512271416907 0.0 10.99681841085065 0.0 0.0 0 0.0 0.0 0.6203715150305281 0.0 {M(Oxidation (M))|F}TY 2.5953 - 350 + 1 1.848 67454.0 1.0 2311 3343 5651 DOHH2_400M_050219_2,5656 DOHH2_400M_050219_2,5656,QDGETELLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5657 29.824 800.0 159950.0 25 0 16292.0 + 32855 SEGYPGQRYY 10 130 610.2727088861099 1218.5308648390196 2 610.2723876833916 MULTI CID FTMS 0 0 0 5651 120511.515625 0.3893587694126929 5 -0.4171161651611328 6 Unmodified _SEGYPGQRYY_ ENSG00000176974|ENST00000316694|SHMT1;ENST00000579558.5_1_17:18243959-18259295:-|nuORF;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1 24.020572477871973 0.4289996903560794 2 {[ES]|[DT]|[{I|L}C]}G 3 7 20.269 0.0 0.0 1.6634 0.0 0.0 0.0 942.4112173043548 942.4112173043548 2.821432553158484 0.0 0.0 0.0 0 0.5 0.0 0.4811132596518673 0.0 + {[ES]|[DT]|[{I|L}C]}G 1.6634 + + 178 1 1.848 97064.9 0.800000011920929 2312 3343 5651 DOHH2_400M_050219_2,5657 DOHH2_400M_050219_2,5657,SEGYPGQRYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5658 29.837 800.0 283110.0 25 0 51930.0 + 45233 YRPLELGPD 9 161 530.2786170518947 0 530.2791015505791 PEAK CID FTMS 0 0 0 5651 91635.5703125 0.5050638348921132 -7 0.2721729278564453 7 Unmodified _YRPLELGPD_ REV__ENST00000523094.5_2_5:157285974-157286100:-|nuORF 21.74664581756881 0.185237546287679 2 {I|L}PVSSH 6 -1 28.933 0.0 0.0 2.7333 0.0 0.0 257.13931310593927 178.05149255924064 435.19080566518 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}PVSSH 2.7333 - 214 + 1 1.848 176810.4 0.6899999976158142 2313 3343 5651 DOHH2_400M_050219_2,5658 DOHH2_400M_050219_2,5658,YRPLELGPD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5660 29.853 800.0 173450.0 25 0 20079.0 -1 PRRCWWRAGPC 11 121 751.3582031130791 0 751.3582031130791 PEAK CID FTMS 0 0 0 -1 0 1 2 Carbamidomethyl (C) _PRRC(Carbamidomethyl (C))WWRAGPC(Carbamidomethyl (C))_ ENST00000392557.8_1_14:105677473-105677599:-|nuORF 2.9952420565917617 0.4761840153648598 2 DVQ 3 -1 11.044 0.0 0.0 0.73594 0.0 0.0 931.4196400134643 224.10515772037343 1155.524797733838 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6747425010840047 DVQ 0.73594 - 133 + 1 1.848 95451.5 0.75 2314 3344 5659 DOHH2_400M_050219_2,5660 DOHH2_400M_050219_2,5660,PRRCWWRAGPC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5661 29.856 146.0 413020.0 25 0 28768.0 + 470 AEFVEVTK 8 90 461.7480243066446 0 461.7482177615166 PEAK CID FTMS 0 0 0 5659 196900.09375 1.0 0 0.0 2 Unmodified _AEFVEVTK_ CON__P02769 20.41453444215458 0.410137252027653 2 {M(Oxidation (M))|F}{I|L}DV 4 6 19.469 0.0 0.0 2.1128 0.0 0.0 200.0815455841892 244.13083826236564 444.21238384655487 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}DV 2.1128 - 49 + 1 1.848 50375.7 1.0 2315 3344 5659 DOHH2_400M_050219_2,5661 DOHH2_400M_050219_2,5661,AEFVEVTK False True False False contaminant PXD020620_cell_line DOHH2_400M_050219_2 5662 29.863 390.0 387380.0 25 0 37415.0 45334 YSLRVYCLE 9 147 382.52658342251016 0 382.5265380740166 PEAK CID FTMS 0 0 0 5659 172116.734375 1.0 0 0.0 3 Unmodified _YSLRVYCLE_ ENSG00000107731|ENST00000335350|UNC5B;nc|ENSG00000107731|Q8IZJ1-2|UNC5B 7.289230182591677 0.3433663536648894 2 GSC 3 7 12.307 0.0 0.0 1.6129 0.0 0.0 134.7159626301189 378.2287371085529 512.9446997386717 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GSC 1.6129 - 24 + 1 1.848 117686.6 1.0 2316 3344 5659 DOHH2_400M_050219_2,5662 DOHH2_400M_050219_2,5662,YSLRVYCLE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5663 29.877 800.0 126880.0 25 0 13085.0 -1 SFMDVSNPFY 10 132 611.7593452268318 1221.5041375204637 2 612.2504150271416 MULTI CID FTMS 0 0 0 5659 104404.4375 0.0486933969150033 -9 0.4051971435546875 4 Oxidation (M) _SFM(Oxidation (M))DVSNPFY_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 14.838274106304384 0.5985701837916485 2 [YT]GMQQDA{M(Oxidation (M))|F} 9 -1 53.312 0.0 0.0 4.3645 0.0 0.0 0.0 177.06462993412143 177.06462993412143 31.546153208173777 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8252574989159953 0.4247425010840047 [YT]GMQQDA{M(Oxidation (M))|F} 4.3645 - 2098 1 1.848 81020.7 0.7599999904632568 2317 3344 5659 DOHH2_400M_050219_2,5663 DOHH2_400M_050219_2,5663,SFMDVSNPFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5664 29.891 800.0 159580.0 25 0 67138.0 35000 SQNSIRNSSQF 11 121 634.3032113867092 1266.5918698402184 2 634.3098632693291 MULTI CID FTMS 0 0 0 5659 102178.4765625 0.3806876792999385 5 -0.4629077911376953 5 Unmodified _SQNSIRNSSQF_ ENSG00000159905|ENST00000587682|ZNF221 14.40537977576856 0.7354982482299568 2 {[QS]|[NT]}KKYDTN{[{M(Oxidation (M))|F}H]|[RQ]} 10 8 + 45.647 0.0 0.0 3.6039 3.6039 73.78 0.0 0.0 0.0 7.683914130944871 5.740312677277188 5.740312677277188 5.740312677277188 0 0.0 1.5228787452803376 0.4247425010840047 0.3494850021680094 {[QS]|[NT]}KKYDTN{[{M(Oxidation (M))|F}H]|[RQ]};{[QS]|[NT]}KKYD[HS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[AG]SKKYDTN{[{M(Oxidation (M))|F}H]|[RQ]};{[QS]|[NT]}KKYDTGG{[{M(Oxidation (M))|F}H]|[RQ]};[AG]SKKYD[HS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QS]|[NT]}KK[WP]A{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[AG]SKKYDTGG{[{M(Oxidation (M))|F}H]|[RQ]};[AG]SKK[WP]A{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[AG]{I|L}K[HQ]DTN{[{M(Oxidation (M))|F}H]|[RQ]};{[ET]|[MV]}[K{I|L}]YDTN{[{M(Oxidation (M))|F}H]|[RQ]} 3.6039;3.1507;2.9973;2.8804;2.5441;2.3918;2.2766;1.7851;1.618;1.3577 -;-;-;-;-;-;-;-;-;- 873 1 1.848 97105.4 0.7599999904632568 2318 3344 5659 DOHH2_400M_050219_2,5664 DOHH2_400M_050219_2,5664,SQNSIRNSSQF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5665 29.905 800.0 87008.0 25 0 6578.9 -1 0 116 593.1557397651807 592.1484632985806 1 594.7659179568291 MULTI CID FTMS 0 0 0 5659 28084.75 0.2571964940524999 -5 0.2299652099609375 6 2 Y 1 -1 15.485 0.0 0.0 2.615 0.0 0.0 411.0741510200634 0.0 411.0741510200634 0.0 2.532858499437534 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.615 - 67 + 1 1.848 54955.3 0.8199999928474426 2319 3344 5659 DOHH2_400M_050219_2,5665 DOHH2_400M_050219_2,5665, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5666 29.919 800.0 61443.0 25 0 4290.6 + -1 YSYMRDYYDRQ 11 84 788.3315917849541 0 788.3315917849541 PEAK CID FTMS 0 0 0 -1 0 7 Oxidation (M) _YSYM(Oxidation (M))RDYYDRQ_ REV__ENSG00000092199|ENST00000553300|HNRNPC;REV__ENST00000556181.1_1_14:58988169-58988316:+|nuORF;REV__nc|ENSG00000092199|P07910-3|HNRNPC;REV__nc|ENSG00000092199|P07910-4|HNRNPC;REV__nc|ENSG00000092199|P07910|HNRNPC 1.3295316138638542 0.4761840153648598 2 {M(Oxidation (M))|F}Q{I|L} 3 -1 7.167 0.0 0.0 0.45515 0.0 0.0 639.2060169665893 544.1710909479124 1183.3771079145015 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Q{I|L} 0.45515 - 42 + 1 1.848 38071.2 0.8199999928474426 2320 3344 5659 DOHH2_400M_050219_2,5666 DOHH2_400M_050219_2,5666,YSYMRDYYDRQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5667 29.929 526.0 199470.0 25 0 11829.0 33072 SEQSLGQKL 9 125 495.2670689386629 0 495.2671081423759 PEAK CID FTMS 0 0 0 5659 126170.8828125 1.0 0 0.0 8 Unmodified _SEQSLGQKL_ ENSG00000104738|ENST00000649973|MCM4 9.38312468134398 0.3193474221348066 2 N{M(Oxidation (M))|F}G 3 8 21.337 0.0 0.0 2.1584 0.0 0.0 92.1456711019842 575.2570284479124 667.4026995498966 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.4247425010840047 N{M(Oxidation (M))|F}G 2.1584 - 130 + 1 1.848 83208.8 1.0 2321 3344 5659 DOHH2_400M_050219_2,5667 DOHH2_400M_050219_2,5667,SEQSLGQKL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5668 29.934 257.0 328740.0 25 0 67001.0 -1 0 119 404.2080253285495 403.20074886194953 1 404.2095825076103 MULTI CID FTMS 0 0 0 5659 119393.8046875 0.5276744443803754 -10 0.4937953948974609 9 2 Y 1 -1 12.764 0.0 0.0 3.1657 0.0 0.0 222.1264518422214 0.0 222.1264518422214 0.0 1.654966095207122 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.1657 - 10 + 1 1.848 73230.1 1.0 2322 3344 5659 DOHH2_400M_050219_2,5668 DOHH2_400M_050219_2,5668, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5669 29.948 800.0 107600.0 25 0 5265.3 + 2248 AQFETKKLY 9 136 564.307774151348 1126.600995369496 2 564.7234985232353 MULTI CID FTMS 0 0 0 -1 0 10 Unmodified _AQFETKKLY_ ENSG00000183291|ENST00000331835|SELENOF;ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF 26.020703789607367 0.2001090068861241 2 [QA]{M(Oxidation (M))|F}E[KT]K{I|L}Y 9 0 + 32.629 0.0 0.0 2.8962 2.8962 80.603 0.0 0.0 0.0 12.368219301198067 6.532665628457014 6.532665628457014 22.04815410317576 0 1.0 0.4089353929735008 0.0 0.0 + + [QA]{M(Oxidation (M))|F}E[KT]K{I|L}Y;[TP][YN][KT]K{I|L}Y 2.8962;0.93919 +;- + 172 + 1 1.848 69760.5 0.5299999713897705 2323 3344 5659 DOHH2_400M_050219_2,5669 DOHH2_400M_050219_2,5669,AQFETKKLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5671 29.952 25.0 1702200.0 25 0 204530.0 + 11196 GENDRGVSF 9 57 490.7252006447551 979.4358483563102 2 490.7251159548759 MULTI CID FTMS 0 0 0 5670 1888512.625 0.3164133533752249 2 -0.2139339447021484 1 Unmodified _GENDRGVSF_ ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000186298|ENST00000335007|PPP1CC;ENSG00000213639|ENST00000395366|PPP1CB;ENST00000462832.5_1_2:29006774-29038903:+|nuORF;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;ENST00000532279.1_1_11:67166350-67167062:-|nuORF;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;nc|ENSG00000172531|P62136-3|PPP1CA;nc|ENSG00000186298|P36873-2|PPP1CC 33.4449034751529 0.1114409586740657 2 GVS{M(Oxidation (M))|F} 4 5 34.412 0.0 0.0 3.5135 0.0 0.0 571.2368031232437 0.0 571.2368031232437 0.0 4.663128534713721 0.0 0.0 0 1.0 0.0 0.0 0.0 + GVS{M(Oxidation (M))|F} 3.5135 + + 34 1 1.844 41249.6 1.0 2324 3345 5670 DOHH2_400M_050219_2,5671 DOHH2_400M_050219_2,5671,GENDRGVSF True True GENDRGVSF 29.952475 490.725115954876 56525538.0 5670.0 ENSG00000213639|ENST00000395366|PPP1CB;;ENSG00000172531|ENST00000376745|PPP1CA;;nc|ENSG00000186298|P36873-2|PPP1CC;;ENST00000532279.1_1_11:67166350-67167062:-|nuORF;;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;;ENSG00000186298|ENST00000335007|PPP1CC;;ENST00000462832.5_1_2:29006774-29038903:+|nuORF;;nc|ENSG00000172531|P62136-3|PPP1CA;;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;;nc|ENSG00000172531|P62136-2|PPP1CA 6.992932319641113 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5672 29.954 48.0 1141100.0 25 0 239770.0 15256 IPGWQALL 8 67 449.2616293140044 896.5087056948088 2 449.2613403201103 MULTI CID FTMS 0 0 0 5670 1244917.125 0.3027963094091096 3 -0.2633342742919922 2 Unmodified _IPGWQALL_ ENSG00000100154|ENST00000397906|TTC28 18.13498045792455 0.6430038125133779 2 {I|L}PG 3 5 45.49 0.0 0.0 5.0741 0.0 0.0 0.0 626.3285616510374 626.3285616510374 37.870156338638594 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}PG 5.0741 + + 29 + 1 1.844 46877.6 1.0 2325 3345 5670 DOHH2_400M_050219_2,5672 DOHH2_400M_050219_2,5672,IPGWQALL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5673 29.955 56.0 1286000.0 25 0 96435.0 + 30626 RFKDRIVSM 9 91 384.5502428729534 1150.6288992190605 3 384.5499145388603 MULTI CID FTMS 0 0 0 5670 882064.8125 0.6805422238381555 -1 0.1106510162353515 3 Unmodified _RFKDRIVSM_ ENSG00000101972|ENST00000371145|STAG2;ENSG00000118007|ENST00000383202|STAG1;nc|ENSG00000101972|Q8N3U4|STAG2;nc|ENSG00000118007|Q8WVM7-2|STAG1 16.149105407346934 0.3995459350917656 2 {I|L}VSM 4 5 34.385 0.0 0.0 2.9884 0.0 0.0 702.3945612128982 0.0 702.3945612128982 0.0 20.21652514092061 0.0 0.0 0 1.0 0.0 0.5 0.0 + {I|L}VSM 2.9884 + + 35 1 1.844 65159.2 1.0 2326 3345 5670 DOHH2_400M_050219_2,5673 DOHH2_400M_050219_2,5673,RFKDRIVSM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5674 29.957 103.0 590560.0 25 0 41634.0 + 6935 EEGDRVITY 9 83 541.2615840486148 1080.5086151640296 2 541.2617065310478 MULTI CID FTMS 0 0 0 5670 582239.6875 1.0 0 0.0 4 Unmodified _EEGDRVITY_ ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A 34.40172386719151 0.1061884637610825 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HHV{I|L}T 7 6 33.218 0.0 0.0 3.0743 0.0 0.0 0.0 196.0608229817956 196.0608229817956 5.827278948381789 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3252574989159953 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HHV{I|L}T 3.0743 - 156 1 1.844 52830.1 1.0 2327 3345 5670 DOHH2_400M_050219_2,5674 DOHH2_400M_050219_2,5674,EEGDRVITY True True EEGDRVITY 29.957376 541.261706531048 5471799.0 5670.0 nc|ENSG00000139842|Q13619-2|CUL4A;;ENSG00000139842|ENST00000375440|CUL4A 7.069133758544922 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5675 29.96 148.0 664150.0 25 0 53008.0 + 32816 SEFPGAQHY 9 106 518.2300999080022 1034.4456468828043 2 518.2305175662041 MULTI CID FTMS 0 0 0 5670 339947.78125 0.7692896661385238 -1 0.1106510162353515 5 Unmodified _SEFPGAQHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000566509.5_1_15:73052730-73067416:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-5|ADPGK 39.957323273325 0.0756908302845263 2 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[QA]HY 9 0 + 37.413 0.0 0.0 3.6167 3.6167 67.399 0.0 0.0 0.0 7.147642715192511 5.051499783199063 5.051499783199063 0.457574905606755 0 0.805462187404089 0.0 0.0 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[QA]HY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PQQHY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[QA]NW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PQQNW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[QA]YH;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PQQYH;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG{[WT]|[RM]}[DP];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[QA]GGW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PQQGGW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}T]Y 3.6167;3.5725;3.1284;3.0842;2.8645;2.8203;2.558;2.2382;2.1888;2.1705 +;-;-;-;-;-;-;-;-;- + 296 + 1 1.844 77531.8 1.0 2328 3345 5670 DOHH2_400M_050219_2,5675 DOHH2_400M_050219_2,5675,SEFPGAQHY True True SEFPGAQHY 29.960336 518.230517566204 11407546.0 5670.0 ENST00000567941.5_1_15:73044684-73075795:-|nuORF;;ENSG00000159322|ENST00000456471|ADPGK;;nc|ENSG00000159322|Q9BRR6-2|ADPGK;;nc|ENSG00000159322|Q9BRR6-5|ADPGK;;ENST00000566509.5_1_15:73052730-73067416:-|nuORF 7.048755009969075 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5676 29.974 795.0 200790.0 25 0 23460.0 8457 ESSEYQSYSQY 11 161 685.7713037319421 0 685.7706176638603 PEAK CID FTMS 0 0 0 5670 236856.34375 1.0 0 0.0 6 Unmodified _ESSEYQSYSQY_ ENSG00000172538|ENST00000311787|FAM170B 22.65808497894818 0.3196792570773988 2 AYS{I|L}EDS 7 9 38.612 0.0 0.0 2.8193 0.0 0.0 75.03038942407882 526.1558321588499 601.1862215829287 0.0 0.0 0.0 0.0 0 0.9802046884880936 0.0 0.9291746928241124 0.0 AYS{I|L}EDS 2.8193 - 2759 + 1 1.844 115245.0 1.0 2329 3345 5670 DOHH2_400M_050219_2,5676 DOHH2_400M_050219_2,5676,ESSEYQSYSQY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5677 29.988 800.0 156870.0 25 0 8281.7 + 30522 REKPDDPLNY 10 145 623.8069495894937 1245.5993462457873 2 623.8068725466728 MULTI CID FTMS 0 0 0 5670 176296.234375 1.0 0 0.0 7 Unmodified _REKPDDPLNY_ ENSG00000174886|ENST00000308961|NDUFA11;ENST00000593233.1_1_19:5894755-5901370:-|nuORF;nc|ENSG00000174886|Q86Y39-2|NDUFA11 51.487983226225225 0.0714176344394665 2 {[RE]|[WV]}K[DP]DP{I|L}NY 10 0 + 49.659 0.0 0.0 3.9867 3.9867 72.06 0.0 0.0 0.0 1.967809330011434 21.921060325072823 1.967809330011434 3.0102999566398125 0 1.6549471895720984 0.0 0.4247425010840047 0.4247425010840047 + + {[RE]|[WV]}K[DP]DP{I|L}NY;{[RE]|[WV]}K[DP]D{I|L}PNY;{[TV]|[{I|L}S]}{[NV]|[RG]}[DP]DP{I|L}NY;{[RE]|[WV]}K[DP]DP{I|L}GGY;{[TV]|[{I|L}S]}{[NV]|[RG]}[DP]D{I|L}PNY;{[RE]|[WV]}K[DP]D{I|L}PGGY;[{I|L}P]D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RP]PNY;[{I|L}P]N[{M(Oxidation (M))|F}E][RP]PNY;[{I|L}P][C(Carbamidomethyl (C))M]V[RP]PNY;[{I|L}P]D{[{M(Oxidation (M))|F}D]|MM}[H{I|L}]{I|L}NY 3.9867;3.745;3.3444;3.251;3.1027;3.0093;2.6385;2.5382;2.4604;2.3333 +;-;-;-;-;-;-;-;-;- + 1034 1 1.844 96551.3 0.8700000047683716 2330 3345 5670 DOHH2_400M_050219_2,5677 DOHH2_400M_050219_2,5677,REKPDDPLNY True True REKPDDPLNY 29.987932 623.806872546673 1064923.0 5670.0 ENSG00000174886|ENST00000308961|NDUFA11;;ENST00000593233.1_1_19:5894755-5901370:-|nuORF;;nc|ENSG00000174886|Q86Y39-2|NDUFA11 9.082571665445965 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5678 29.994 345.0 284190.0 25 0 25567.0 + 7175 EEPSRPSASW 10 106 573.2658450490193 1144.5171371648385 2 573.2643920779228 MULTI CID FTMS 0 0 0 5670 157047.375 0.8043649886348094 -7 0.3745651245117187 8 Unmodified _EEPSRPSASW_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000545049.1_1_12:2977686-2983239:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 57.72198328787511 0.0425618229276495 2 SW 2 8 27.153 0.0 0.0 2.3725 0.0 0.0 853.3947749595635 0.0 853.3947749595635 0.0 -1.403266760442765 -1.403266760442765 0.0 0 0.6139829889124311 0.0 0.3054621874040891 0.0 + SW 2.3725 + + 162 + 1 1.844 77852.4 1.0 2331 3345 5670 DOHH2_400M_050219_2,5678 DOHH2_400M_050219_2,5678,EEPSRPSASW True True EEPSRPSASW 29.994184 573.264392077923 2645111.0 5670.0 ENSG00000111206|ENST00000359843|FOXM1;;nc|ENSG00000111206|Q08050-2|FOXM1;;nc|ENSG00000111206|Q08050-3|FOXM1;;ENST00000545049.1_1_12:2977686-2983239:-|nuORF 7.090524196624756 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5679 30.008 800.0 195570.0 25 0 35335.0 + 7986 ELYERAREL 9 124 589.8118965148861 0 589.8119384646416 PEAK CID FTMS 0 0 0 5670 141663.234375 1.0 0 0.0 9 Unmodified _ELYERAREL_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-3|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 19.361941925380144 0.2068558026293938 2 QYD 3 8 12.892 0.0 0.0 1.0948 0.0 0.0 131.0956982677322 637.3448580377561 768.4405563054884 0.0 0.0 0.0 0.0 0 0.1694451763165201 0.0 0.0 0.0 QYD 1.0948 - 208 + 1 1.844 121885.8 0.7699999809265137 2332 3345 5670 DOHH2_400M_050219_2,5679 DOHH2_400M_050219_2,5679,ELYERAREL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5680 30.022 800.0 285050.0 25 0 25453.0 + 408 AEEDPAHAF 9 172 493.7145541390671 985.4145553449342 2 493.7145263552666 MULTI CID FTMS 0 0 0 5670 135912.71875 0.5359882859660261 -1 0.1106510162353515 10 Unmodified _AEEDPAHAF_ ENSG00000170145|ENST00000304987|SIK2 53.57557251787612 0.0325303259649373 2 AEEYW 5 6 58.805 0.0 0.0 5.9675 0.0 0.0 0.0 304.1054781549438 304.1054781549438 23.55794806410449 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.4247425010840047 0.0 AEEYW 5.9675 - 1751 + 1 1.844 176489.8 0.6700000166893005 2333 3345 5670 DOHH2_400M_050219_2,5680 DOHH2_400M_050219_2,5680,AEEDPAHAF True True AEEDPAHAF 30.021829 493.714526355267 1975811.125 5670.0 ENSG00000170145|ENST00000304987|SIK2 8.13702917098999 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5681 30.037 800.0 159150.0 25 0 19706.0 + 43987 YIDEYRNDY 9 113 625.7698732673892 1249.5251936015784 2 625.7678710818291 MULTI CID FTMS 0 0 0 5670 96021.6484375 1.0 0 0.0 11 Unmodified _YIDEYRNDY_ ENSG00000013441|ENST00000321356|CLK1;ENST00000473565.5_1_2:201725957-201729352:-|nuORF;ENST00000481641.1_1_2:201725957-201728949:-|nuORF;ENST00000492793.1_1_2:201725957-201729378:-|nuORF;nc|ENSG00000013441|P49759-2|CLK1;nc|ENSG00000013441|P49759-3|CLK1 69.10491478415734 0.0214449631113747 2 Y{I|L}DEY[RN]DY 9 0 + 93.598 0.0 0.0 7.4906 7.4906 81.48 0.0 0.0 0.0 36.478174818886366 7.447274948966935 7.447274948966935 1.020599913279625 0 0.8494850021680094 2.0 1.055462187404089 1.1237125054200234 + + Y{I|L}DEY[RN]DY;Y{I|L}DYE[RN]DY;Y{I|L}DEY[YT]{[{M(Oxidation (M))|F}H]|[RQ]};Y{I|L}YDE[RN]DY;Y{I|L}DYE[YT]{[{M(Oxidation (M))|F}H]|[RQ]};Y{I|L}YDE[YT]{[{M(Oxidation (M))|F}H]|[RQ]};Y{I|L}DP[DV][HN]DY;Y{I|L}DP[DP][C(Carbamidomethyl (C))N]EK;Y{I|L}Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[C(Carbamidomethyl (C))N]EK;Y{I|L}D[WH]{[RE]|[WV]}[MT] 7.4906;7.409;6.8946;6.827;6.813;6.231;5.25;4.5642;4.0823;4.017 +;-;-;-;-;-;-;-;-;- + 658 + 1 1.844 100344.7 0.6299999952316284 2334 3345 5670 DOHH2_400M_050219_2,5681 DOHH2_400M_050219_2,5681,YIDEYRNDY True True YIDEYRNDY 30.037119 625.7697 454778.125 5670.0 ENST00000473565.5_1_2:201725957-201729352:-|nuORF;;nc|ENSG00000013441|P49759-3|CLK1;;ENSG00000013441|ENST00000321356|CLK1;;nc|ENSG00000013441|P49759-2|CLK1;;ENST00000492793.1_1_2:201725957-201729378:-|nuORF;;ENST00000481641.1_1_2:201725957-201728949:-|nuORF 7.312994639078776 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5682 30.051 800.0 140950.0 25 0 8489.9 + 7270 EETEDYRQF 9 136 608.7594942165796 1215.504435499959 2 608.7601196169853 MULTI CID FTMS 0 0 0 5670 77114.1953125 0.7848751216102691 -1 0.1106510162353515 12 Unmodified _EETEDYRQF_ ENSG00000029363|ENST00000531224|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;nc|ENSG00000029363|Q9NYF8-3|BCLAF1 115.6920309560759 0.0032017028976397 2 EETEDYRQ{M(Oxidation (M))|F} 9 0 + 94.747 0.0 0.0 7.7949 7.7949 92.078 0.0 0.0 0.0 58.94138788323808 14.921977353230956 14.921977353230956 9.208187539523747 0 0.6989700043360187 2.0 0.805462187404089 1.8098943791441968 + + EETEDYRQ{M(Oxidation (M))|F};EETEDY[VG]Q{M(Oxidation (M))|F};EETEDYR[AG]{M(Oxidation (M))|F};EETED{M(Oxidation (M))|F}[TA]Q{M(Oxidation (M))|F};EETED{M(Oxidation (M))|F}{[VA]|[{I|L}G]}[YN];EETED[RP]E[DP];EETEDY[VG][AG]{M(Oxidation (M))|F};[DP][RP]{M(Oxidation (M))|F}DET[HC];EETE[R{M(Oxidation (M))|F}]E[YN];[PS][HK]YDET[HC] 7.7949;7.0373;6.786;6.0545;5.4338;4.8179;4.7944;4.7686;4.7291;4.4295 +;-;-;-;-;-;-;-;-;- + 2110 + 1 1.844 84107.0 0.6000000238418579 2335 3345 5670 DOHH2_400M_050219_2,5682 DOHH2_400M_050219_2,5682,EETEDYRQF True True EETEDYRQF 30.050952 608.760119616985 822676.375 5670.0 nc|ENSG00000029363|Q9NYF8-2|BCLAF1;;ENSG00000029363|ENST00000531224|BCLAF1;;nc|ENSG00000029363|Q9NYF8-3|BCLAF1 7.761701742808024 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5683 30.055 119.0 560390.0 25 0 183050.0 -1 SIPMVKRP 8 84 472.2732033868052 0 472.2727233767509 PEAK CID FTMS 0 0 0 5670 244252.578125 0.3482056239426083 26 -2.029176712036133 13 Oxidation (M) _SIPM(Oxidation (M))VKRP_ ENSG00000198939|ENST00000361362|ZFP2 9.347437153973935 0.5488964601725408 2 E 1 -1 6.1092 0.0 0.0 0.64817 0.0 0.0 742.4153967865027 68.05134760074452 810.4667443872472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 E 0.64817 - 7 + 1 1.844 55912.7 1.0 2336 3345 5670 DOHH2_400M_050219_2,5683 DOHH2_400M_050219_2,5683,SIPMVKRP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5684 30.068 800.0 230530.0 25 0 24823.0 -1 0 73 996.303010084916 4976.47866809158 5 996.905322253704 MULTI CID FTMS 0 0 0 5670 167385.1875 0.8653060143104438 -1 0.1106510162353515 14 2 QDT 3 -1 22.505 0.0 0.0 0.45223 0.0 0.0 874.3931917374174 3754.880975082345 4629.274166819762 0.0 0.0 0.0 0.0 0 0.6307196863200843 0.0 0.0 0.0 QDT 0.45223 - 49 + 1 1.844 124640.1 0.5299999713897705 2337 3345 5670 DOHH2_400M_050219_2,5684 DOHH2_400M_050219_2,5684, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5686 30.073 4.9 7550300.0 25 0 540720.0 + 26436 NTDSPLRY 8 72 483.2381113576644 964.4616697821288 2 483.2383605837822 MULTI CID FTMS 0 0 0 5685 8077019.0 0.2268598192181188 3 -0.2316532135009765 1 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 58.6788170122104 0.1149141431586871 2 {[QS]|[NT]}DSP{I|L}RY 8 0 + 68.079 0.0 0.0 7.0587 7.0587 96.308 0.0 0.0 0.0 60.292232800463424 11.202817147792205 11.202817147792205 68.07882975038464 0 0.7742275032520141 2.0 0.0 0.2614393726401688 + + {[QS]|[NT]}DSP{I|L}RY 7.0587 + + 118 + 1 1.844 34193.3 1.0 2338 3346 5685 DOHH2_400M_050219_2,5686 DOHH2_400M_050219_2,5686,NTDSPLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5687 30.086 719.0 226330.0 25 0 23124.0 + 37435 TLDENPGVRY 10 138 582.288249484826 1162.561946036452 2 582.2884399294853 MULTI CID FTMS 0 0 0 5685 41899.796875 0.0349805153827875 3 -0.2316532135009765 2 Unmodified _TLDENPGVRY_ ENSG00000116266|ENST00000370008|STXBP3 23.78978130925829 0.4341852049148378 2 [{I|L}T]DENP 6 4 47.809 0.0 0.0 4.1124 0.0 0.0 0.0 490.2427462213501 490.2427462213501 36.026291536404486 0.0 0.0 0.0 0 0.6549471895720984 2.0 0.0 0.0 + [{I|L}T]DENP 4.1124 + + 187 + 1 1.844 123081.4 1.0 2339 3346 5685 DOHH2_400M_050219_2,5687 DOHH2_400M_050219_2,5687,TLDENPGVRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5688 30.088 92.0 741940.0 25 0 93728.0 + 25331 NAKVAEVL 8 94 422.250391472127 842.486230011054 2 422.2498657107353 MULTI CID FTMS 0 0 0 5685 587846.125 0.4297114907097624 -1 0.1206035614013671 3 Unmodified _NAKVAEVL_ ENSG00000118246|ENST00000402774|FASTKD2;ENST00000471788.1_1_2:207651391-207655428:+|nuORF;ENST00000487777.5_1_2:207631381-207653673:+|nuORF;nc|ENSG00000118246|Q9NYY8-2|FASTKD2 38.15118350030904 0.2652218139009398 2 GNAV{[CP]|[EA]}V{I|L} 8 2 24.333 0.0 0.0 2.8882 0.0 0.0 71.07425887275546 0.0 71.07425887275546 0.0 -0.0700718090006162 -0.0700718090006162 0.0 0 0.8182503180159344 0.0 0.5 1.1307196863200843 GNAV{[CP]|[EA]}V{I|L} 2.8882 - 214 1 1.844 57788.8 1.0 2340 3346 5685 DOHH2_400M_050219_2,5688 DOHH2_400M_050219_2,5688,NAKVAEVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5689 30.089 71.0 833650.0 25 0 223010.0 + 2250 AQFETKKLY 9 77 376.5410771725299 1126.6014021177898 3 376.5408203005791 MULTI CID FTMS 0 0 0 5685 504042.375 1.0 0 0.0 4 Unmodified _AQFETKKLY_ ENSG00000183291|ENST00000331835|SELENOF;ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF 20.580933911654288 0.2795815587326093 2 [QA]{M(Oxidation (M))|F}ETKK{I|L}Y 9 0 + 38.082 0.0 0.0 3.3803 3.3803 82.879 0.0 0.0 0.0 24.12971259689116 14.973024840566474 14.973024840566474 38.082137524178 0 0.0 0.0 0.0 0.0 + + [QA]{M(Oxidation (M))|F}ETKK{I|L}Y 3.3803 + + 83 + 1 1.844 52518.9 1.0 2341 3346 5685 DOHH2_400M_050219_2,5689 DOHH2_400M_050219_2,5689,AQFETKKLY False True AQFETKKLY 30.089239 376.540820300579 6168591.75 5685.0 ENST00000331835.9_2_1:87346375-87379803:-|nuORF;;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;;nc|ENSG00000183291|O60613-2|SELENOF;;ENSG00000183291|ENST00000331835|SELENOF 7.258649826049805 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5690 30.092 112.0 481910.0 25 0 36475.0 + 2249 AQFETKKLY 9 92 564.307774151348 1126.600995369496 2 564.3079711794853 MULTI CID FTMS 0 0 0 5685 419304.3125 1.0 0 0.0 5 Unmodified _AQFETKKLY_ ENSG00000183291|ENST00000331835|SELENOF;ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF 34.221707139014875 0.1071766711162635 2 [QA]{M(Oxidation (M))|F}ETKK{I|L}Y 9 0 + 56.486 0.0 0.0 5.0139 5.0139 77.111 0.0 0.0 0.0 32.11548792976544 14.09256854528806 14.09256854528806 3.6991128507179374 0 1.424742501084005 0.9208187539523752 0.0 0.0 + + [QA]{M(Oxidation (M))|F}ETKK{I|L}Y;[QA]{M(Oxidation (M))|F}{M(Oxidation (M))|F}[NP]K{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[QA][NP]K{I|L}Y;[{M(Oxidation (M))|F}E]TKK[QA]{I|L}Y 5.0139;4.6855;1.4736;0.91997 +;-;-;- + 137 + 1 1.844 44222.8 1.0 2342 3346 5685 DOHH2_400M_050219_2,5690 DOHH2_400M_050219_2,5690,AQFETKKLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5691 30.095 147.0 418150.0 25 0 33263.0 + 10450 FTEQYNEQY 9 92 611.2566201557208 0 611.2564575076103 PEAK CID FTMS 0 0 0 5685 380437.75 0.3070009691681858 -1 0.1206035614013671 6 Unmodified _FTEQYNEQY_ ENSG00000173914|ENST00000310046|RBM4B 47.74868867922204 0.0378261468855112 2 ENYVNQ 6 6 38.691 0.0 0.0 3.1701 0.0 0.0 309.1314521260916 161.02468286685783 470.15613499294943 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.6747425010840047 ENYVNQ 3.1701 - 240 + 1 1.844 52637.1 1.0 2343 3346 5685 DOHH2_400M_050219_2,5691 DOHH2_400M_050219_2,5691,FTEQYNEQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5692 30.097 119.0 610630.0 25 0 70291.0 + 483 AEGIHTGQF 9 90 480.232895107016 958.451237280832 2 480.2321655154228 MULTI CID FTMS 0 0 0 5685 335520.03125 0.0991498170676884 -2 0.2312545776367187 7 Unmodified _AEGIHTGQF_ ENSG00000161016|ENST00000528957|RPL8;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;ENST00000531767.1_1_8:146017155-146017514:-|nuORF 65.23502041540118 0.0231836506122253 2 [TA][HV]GQ{[CP]|[EA]}{M(Oxidation (M))|F} 9 6 + 35.378 0.0 0.0 3.6912 3.6912 69.554 0.0 0.0 0.0 0.9801371741293324 21.08159472527168 0.9801371741293324 1.8258999534726428 0 0.3807196863200844 0.0 1.535666875892183 0.3494850021680094 [TA][HV]GQ{[CP]|[EA]}{M(Oxidation (M))|F};[HT]G{I|L}GQ{[CP]|[EA]}{M(Oxidation (M))|F};[TA]NH{[VA]|[{I|L}G]}{[CP]|[EA]}{M(Oxidation (M))|F};[TA][HV]GQ{M(Oxidation (M))|F}{[CP]|[EA]};[HT]G{I|L}GQ{M(Oxidation (M))|F}{[CP]|[EA]};{[CP]|[EA]}[HK]Q{[CP]|[EA]}{M(Oxidation (M))|F};[HT]G{I|L}G[AG]{[CP]|[EA]}{M(Oxidation (M))|F};[HT]GQ{[VA]|[{I|L}G]}{[CP]|[EA]}{M(Oxidation (M))|F};[TA]NH{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{[CP]|[EA]};[HT]{[QV]|[N{I|L}]|[RA]|[KV]}Q{[CP]|[EA]}{M(Oxidation (M))|F} 3.6912;3.5007;2.884;2.7709;2.5804;2.3352;2.1753;1.9935;1.9637;1.8135 -;-;-;-;-;-;-;-;-;- 506 1 1.844 62275.9 1.0 2344 3346 5685 DOHH2_400M_050219_2,5692 DOHH2_400M_050219_2,5692,AEGIHTGQF True True AEGIHTGQF 30.097029 480.232165515423 33054910.0 5685.0 ENST00000531767.1_1_8:146017155-146017514:-|nuORF;;ENSG00000161016|ENST00000528957|RPL8;;ENST00000525232.5_1_8:146017155-146017514:-|nuORF 5.575051784515381 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5693 30.101 190.0 236210.0 25 0 19879.0 + -1 ITDPSLSKTDSY 12 74 664.3305518322815 663.3232753656814 1 664.3273193240166 MULTI CID FTMS 0 0 0 5685 278433.1875 0.039801984072527 7 -0.5800437927246094 8 ENST00000471232.5_1_2:32750532-32815924:+|nuORF;ENSG00000115760|ENST00000421745|BIRC6 2 [NP]A{I|L}SY 6 -1 + 41.515 0.0 0.0 6.2586 6.2586 91.001 0.0 0.0 0.0 2.2526846188150884 9.705772888417243 2.2526846188150884 15.070844780971058 0 0.7302046884880937 0.0 0.4247425010840047 0.0 [NP]A{I|L}SY;[VP][QA]SY;[KA][PA]DY 6.2586;3.9866;2.6244 -;-;- 57 1 1.844 38913.8 1.0 2345 3346 5685 DOHH2_400M_050219_2,5693 DOHH2_400M_050219_2,5693, False False ITDPSLSKTDSY 30.100702 663.8263 1958192.0 5685.0 ENST00000471232.5_1_2:32750532-32815924:+|nuORF;;ENSG00000115760|ENST00000421745|BIRC6 6.996925671895345 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5694 30.107 357.0 285540.0 25 0 19506.0 + 43744 YDTSQMYCNS 10 122 606.2208350359214 1210.4271171386426 2 606.2211791872978 MULTI CID FTMS 0 0 0 5685 251469.90625 0.8811428415001369 -1 0.1206035614013671 9 Unmodified _YDTSQMYCNS_ REV__nc|ENSG00000151090|P10828-2|THRB 14.838274106304384 0.5985701837916485 2 Y{I|L}NN 4 -1 37.665 0.0 0.0 3.1117 0.0 0.0 303.10297270680513 400.0639945255611 703.1669672323662 0.0 0.0 0.0 0.0 0 0.75 0.0 0.0 1.1237125054200234 Y{I|L}NN 3.1117 - 261 + 1 1.844 76935.8 1.0 2346 3346 5685 DOHH2_400M_050219_2,5694 DOHH2_400M_050219_2,5694,YDTSQMYCNS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5695 30.112 233.0 346870.0 25 0 32503.0 + 24207 MAHAVTQL 8 105 435.7291299378528 869.4437069425056 2 435.7285339236259 MULTI CID FTMS 0 0 0 5685 250627.625 1.0 0 0.0 10 Unmodified _MAHAVTQL_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 22.4526382665184 0.5719518724627818 2 [HA]MAVTQ{I|L} 8 2 + 28.026 0.0 0.0 3.2234 3.2234 74.848 0.0 0.0 0.0 4.6040937697618745 12.541003229853873 4.6040937697618745 7.781512503836431 0 0.3182503180159344 0.0 0.5 0.0 [HA]MAVTQ{I|L};[HA]AMVTQ{I|L};[AG]{I|L}[HM]TQ{I|L};[Q{I|L}][HM]TQ{I|L};[VP]{[DA]|[EG]}VEQ{I|L};[NP][RN]EQ{I|L} 3.2234;2.3284;1.5024;1.1475;0.55644;0.21808 -;-;-;-;-;- 115 1 1.844 71065.4 1.0 2347 3346 5685 DOHH2_400M_050219_2,5695 DOHH2_400M_050219_2,5695,MAHAVTQL False True MAHAVTQL 30.111518 435.728533923626 1260904.75 5685.0 nc|ENSG00000166226|P78371-2|CCT2;;ENSG00000166226|ENST00000299300|CCT2 7.014878114064534 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5696 30.116 220.0 451970.0 25 0 87766.0 + 38764 TVDARVYSY 9 116 537.2673205661446 1072.520088199089 2 537.2667114138603 MULTI CID FTMS 0 0 0 5685 213275.890625 0.3457964985362687 -1 0.1206035614013671 11 Unmodified _TVDARVYSY_ ENSG00000165609|ENST00000491614|NUDT5;ENST00000378952.7_1_10:12209703-12222485:-|nuORF 40.72490554402381 0.0714771638475563 2 TVY{[RE]|[WV]}[VS]GY 9 4 + 59.108 0.0 0.0 5.5111 5.5111 73.975 0.0 0.0 0.0 0.2427273283836939 0.2427273283836939 0.2427273283836939 0.2427273283836939 0 0.805462187404089 2.0 0.7742275032520141 0.0 TVY{[RE]|[WV]}[VS]GY;{[TV]|[{I|L}S]}DARVYSY;TV{[QC]|[C(Carbamidomethyl (C))A]}VT[Y{I|L}]{M(Oxidation (M))|F};TVW[YV][VS]GY;TV[QA]MT[Y{I|L}]{M(Oxidation (M))|F};TVW[SG]T[Y{I|L}]{M(Oxidation (M))|F};TVD[HM]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L};TVY[YG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L};{[DA]|[EG]}RVTVYSY;{[TV]|[{I|L}S]}YE[RK]DY 5.5111;5.4885;5.1162;4.8344;4.4645;4.3907;3.9328;3.6147;3.5761;3.3213 -;+;-;-;-;-;-;-;-;- + 700 + 1 1.844 79976.8 1.0 2348 3346 5685 DOHH2_400M_050219_2,5696 DOHH2_400M_050219_2,5696,TVDARVYSY True True TVDARVYSY 30.115679 537.26671141386 3133301.75 5685.0 ENSG00000165609|ENST00000491614|NUDT5;;ENST00000378952.7_1_10:12209703-12222485:-|nuORF 6.520092328389485 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5697 30.12 239.0 231620.0 25 0 57941.0 -1 RQYVVRLMA 9 64 576.3213447286466 1150.6281365240932 2 576.3217040896416 MULTI CID FTMS 0 0 0 5685 204518.03125 1.0 0 0.0 12 Oxidation (M) _RQYVVRLM(Oxidation (M))A_ ENSG00000105248|ENST00000262962|YJU2 4.3292370932331545 0.7635526921153418 2 M 1 -1 11.783 0.0 0.0 1.024 0.0 0.0 1001.5772922631542 0.0 1001.5772922631542 0.0 5.545611563368826 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.024 + + 6 + 1 1.844 47511.3 1.0 2349 3346 5685 DOHH2_400M_050219_2,5697 DOHH2_400M_050219_2,5697,RQYVVRLMA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5698 30.125 177.0 301850.0 25 0 20566.0 + 38616 TTESEVMKY 9 89 544.252865504159 1086.491178075118 2 544.2530395388603 MULTI CID FTMS 0 0 0 5685 205502.8125 1.0 0 0.0 13 Unmodified _TTESEVMKY_ ENSG00000100714|ENST00000652337|MTHFD1;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 29.081581746732265 0.1611639662936252 2 {[DS]|[MA]|[CV]|TT}E{[ES]|[DT]|[{I|L}C]}VMKY 9 0 + 34.147 0.0 0.0 3.1428 3.1428 71.855 0.0 0.0 0.0 4.948500216800944 4.948500216800944 4.948500216800944 4.948500216800944 0 0.4247425010840047 0.0 0.4247425010840047 0.0 + + {[DS]|[MA]|[CV]|TT}E{[ES]|[DT]|[{I|L}C]}VMKY;[VG]{[{M(Oxidation (M))|F}H]|[RQ]}V{[ES]|[DT]|[{I|L}C]}E[PS];[PS]QQV{[ES]|[DT]|[{I|L}C]}E[PS];{[DS]|[MA]|[CV]|TT}E[C(Carbamidomethyl (C))K]{[SA]|[TG]}KY;{NN|[MP]|[D{I|L}]|[EV]}SEV[WH]{[DS]|[MA]|[CV]|TT};{[DS]|[MA]|[CV]|TT}E{[ES]|[DT]|[{I|L}C]}V[HT][PS];[VG][C(Carbamidomethyl (C))Q]V[WH]{[DS]|[MA]|[CV]|TT};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HA][C(Carbamidomethyl (C))K]E[PS];{[DS]|[MA]|[CV]|TT}[HK][C(Carbamidomethyl (C))K]E[PS];{[TV]|[{I|L}S]}DEV[WH]{[DS]|[MA]|[CV]|TT} 3.1428;2.6874;2.2482;1.6941;1.5233;1.3068;1.0272;1.0232;0.70561;0.70328 +;-;-;-;-;-;-;-;-;- + 208 + 1 1.844 48403.5 1.0 2350 3346 5685 DOHH2_400M_050219_2,5698 DOHH2_400M_050219_2,5698,TTESEVMKY False True TTESEVMKY 30.124783 544.25303953886 948790.3125 5685.0 ENSG00000100714|ENST00000652337|MTHFD1;;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 6.435961087544759 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5699 30.128 147.0 420100.0 25 0 81300.0 37530 TLHPVWSQQ 9 92 548.2834825618476 1094.552412190495 2 548.2841674685478 MULTI CID FTMS 0 0 0 5685 181093.984375 0.1257917489575904 12 -0.9965457916259766 14 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 12.872603262515298 0.4882369880199512 2 [{I|L}T]HPPEH[HK] 9 5 + 17.468 0.0 0.0 1.5959 1.5959 76.303 0.0 0.0 0.0 1.9788463740601987 1.9788463740601987 1.9788463740601987 9.66325356525636 0 1.961758134947864 0.0 0.0 0.0 [{I|L}T]HPPEH[HK];{[YC]|[HE]}Q{[WT]|[RM]}[KA]VP;{[YC]|[HE]}[RV]C(Carbamidomethyl (C))[KA]VP;[{I|L}T][KA]C(Carbamidomethyl (C))TH[PA]P;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS]E[YV][HK];[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}EH[HK];[R{M(Oxidation (M))|F}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[W{M(Oxidation (M))|F}]VP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS]TC(Carbamidomethyl (C))[KA]VP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[{I|L}T]EH[HK] 1.5959;0.7131;0.55222;0.45116;0.22035;0.18777;0.10595;0.044851;0.026889 -;-;-;-;-;-;-;-;- 153 1 1.844 55841.4 1.0 2351 3346 5685 DOHH2_400M_050219_2,5699 DOHH2_400M_050219_2,5699,TLHPVWSQQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5700 30.134 319.0 165850.0 25 0 12589.0 + 36888 TEQGPTGVTM 10 98 510.7370745100506 1019.4595960869012 2 510.7363464236259 MULTI CID FTMS 0 0 0 5685 124547.03125 1.0 0 0.0 15 Unmodified _TEQGPTGVTM_ chr19:58306216-58312169|16|11.12|0.0|20.09|+|0|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,acceptor,+,58312169,58313278|ZNF8-ERVK3-1,None|1;chr19:58306216-58312266|18|11.0|0.0|20.07|+|2|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,acceptor,+,58312266,58313278|ZNF8-ERVK3-1,None|2;ENSG00000142396|ENST00000413518|ERVK3-1 10.823927491677226 0.6659270209832991 2 TM 2 8 23.583 0.0 0.0 2.3133 0.0 0.0 769.3605396368198 0.0 769.3605396368198 0.0 6.593793813122062 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 + TM 2.3133 + + 138 + 1 1.844 48697.5 1.0 2352 3346 5685 DOHH2_400M_050219_2,5700 DOHH2_400M_050219_2,5700,TEQGPTGVTM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5701 30.147 800.0 134770.0 25 0 12939.0 + 35219 SSDPERDEPC 10 152 567.7213698367985 1133.428186740397 2 567.7213012576103 MULTI CID FTMS 0 0 0 5685 109997.6328125 1.0 0 0.0 16 Unmodified _SSDPERDEPC_ REV__ENSG00000181026|ENST00000332810|AEN;REV__ENST00000557927.1_1_15:89172339-89173522:+|nuORF;REV__nc|ENSG00000181026|Q8WTP8-2|AEN 10.823927491677226 0.6659270209832991 2 DPASQ{I|L}[MT] 8 -1 35.94 0.0 0.0 3.1709 0.0 0.0 272.04990412496574 0.0 272.04990412496574 0.0 20.455481485893543 0.0 0.0 0 0.0 0.0 0.5 0.7742275032520141 DPASQ{I|L}[MT] 3.1709 - 1261 + 1 1.844 87599.5 0.5299999713897705 2353 3346 5685 DOHH2_400M_050219_2,5701 DOHH2_400M_050219_2,5701,SSDPERDEPC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5702 30.15 128.0 869600.0 25 0 49399.0 + 684 AEMQWKRDY 9 102 409.525496554986 1225.5546602651582 3 409.5255615115166 MULTI CID FTMS 0 0 0 5685 101399.421875 0.0801703842863569 -2 0.2312545776367187 17 Unmodified _AEMQWKRDY_ ENSG00000140990|ENST00000268668|NDUFB10;nc|ENSG00000140990|O96000-2|NDUFB10 34.93206674587334 0.1032771302489716 2 AEMQWKY[RD] 9 2 + 80.187 0.0 0.0 6.543 6.543 84.269 0.0 0.0 0.0 34.97302484056647 5.440680443502757 5.440680443502757 5.440680443502757 0 0.3807196863200844 2.0 0.8807196863200843 0.5 AEMQWKY[RD];AEMQWK[RD]Y;AEMQYWK[RD];AEMQWYK[RD];AEM[AG]WKY[RD];AEMQYR{[SA]|[TG]}[RD];AEMYQWK[RD];AEM[AG]WK[RD]Y;AEM[AG]YWK[RD];AEYMQWK[RD] 6.543;6.099;6.075;6.01;5.7916;5.6005;5.5374;5.3477;5.3236;5.2964 -;+;-;-;-;-;-;-;-;- + 1655 + 1 1.844 93618.4 1.0 2354 3346 5685 DOHH2_400M_050219_2,5702 DOHH2_400M_050219_2,5702,AEMQWKRDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5703 30.155 261.0 301920.0 25 0 43144.0 + 5347 DLHKKPFL 8 107 499.294512559373 996.574472185546 2 499.2948486208916 MULTI CID FTMS 0 0 0 5685 88025.0390625 1.0 0 0.0 18 Unmodified _DLHKKPFL_ ENSG00000132182|ENST00000254508|NUP210 32.30548876998284 0.3644845974844379 2 {I|L}DHKKP{M(Oxidation (M))|F}{I|L} 8 2 + 59.37 0.0 0.0 5.9574 5.9574 91.409 0.0 0.0 0.0 44.15324403823484 11.847463005645764 11.847463005645764 23.576896695820537 0 1.089136830878453 1.6989700043360187 0.4247425010840047 0.0 {I|L}DHKKP{M(Oxidation (M))|F}{I|L};{I|L}DHKK[KA]{[SA]|[TG]} 5.9574;3.5916 -;- 61 + 1 1.844 63578.9 1.0 2355 3346 5685 DOHH2_400M_050219_2,5703 DOHH2_400M_050219_2,5703,DLHKKPFL False True DLHKKPFL 30.154801 499.294848620892 705380.875 5685.0 ENSG00000132182|ENST00000254508|NUP210 4.178113301595052 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5704 30.158 81.0 724830.0 25 0 173740.0 + + 43455 MPMKVKQL 8 82 487.2784972514205 972.5424415696408 2 487.7795287966728 MULTI CID FTMS 0 0 0 5685 480820.8125 0.7222840832295727 -5 0.346506118774414 19 Unmodified _WTKAINQL_ ENSG00000155561|ENST00000285968|NUP205 20.871210003555333 0.6025813472596342 2 PMKVKQ{I|L} 7 -1 25.86 0.0 0.0 2.659 0.0 0.0 130.0375101492894 0.0 130.0375101492894 0.0 10.276527166345526 0.0 0.0 0 0.0 0.0 0.0 0.5796896906561032 PMKVKQ{I|L} 2.659 - 148 + 1 1.844 50089.5 1.0 2356 3346 5685 DOHH2_400M_050219_2,5704 DOHH2_400M_050219_2,5704,WTKAINQL False False MPMKVKQL 30.157801 487.779528796673 7266902.0 5685.0 ENSG00000155561|ENST00000285968|NUP205 4.56934912999471 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5705 30.162 205.0 308950.0 25 0 40552.0 + 6798 EEAPPATQNF 10 96 552.253513457772 1102.492473982344 2 552.2529174685478 MULTI CID FTMS 0 0 0 5685 136578.359375 1.0 0 0.0 20 Unmodified _EEAPPATQNF_ ENSG00000119383|ENST00000393370|PTPA;nc|ENSG00000119383|Q15257-3|PTPA;nc|ENSG00000119383|Q15257-4|PTPA;nc|ENSG00000119383|Q15257|PTPA 29.081581746732265 0.3152867722954398 2 EEA[HQ]HM 7 6 16.691 0.0 0.0 1.514 0.0 0.0 0.0 237.1001759689252 237.1001759689252 3.1963821625317657 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.5941876774005248 0.0 EEA[HQ]HM 1.514 - 154 1 1.844 53907.6 1.0 2357 3346 5685 DOHH2_400M_050219_2,5705 DOHH2_400M_050219_2,5705,EEAPPATQNF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5707 30.171 331.0 328290.0 25 0 83712.0 + 30996 RLECGLLSL 9 87 502.2839509392209 0 502.2833740115166 PEAK CID FTMS 0 0 0 5706 130436.703125 0.344295920439606 -22 1.325239181518555 1 Unmodified _RLECGLLSL_ REV__ENST00000509581.5_1_5:276369-276570:+|nuORF 15.847184025352805 0.2451986057151378 2 S 1 -1 4.6041 0.0 0.0 0.45924 0.0 0.0 617.4658683317638 295.0317782037719 912.4976465355358 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.45924 + + 9 + 1 1.846 87739.9 1.0 2358 3347 5706 DOHH2_400M_050219_2,5707 DOHH2_400M_050219_2,5707,RLECGLLSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5708 30.173 29.0 1917400.0 25 0 213550.0 8599 EVAKTQAL 8 87 430.2477319057757 858.4809108783514 2 430.2474853396416 MULTI CID FTMS 0 0 0 5706 2112248.75 1.0 0 0.0 2 Unmodified _EVAKTQAL_ ENSG00000141569|ENST00000269383|TRIM65 34.10243960390752 0.3329570729325616 2 {NN|[MP]|[D{I|L}]|[EV]}[KA]TQA{I|L} 8 0 + 32.725 0.0 0.0 3.812 3.812 71.265 0.0 0.0 0.0 3.0052775224746213 8.667053245199625 3.0052775224746213 3.0052775224746213 0 0.7429928190999391 2.0 0.6421590589602533 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}[KA]TQA{I|L};{[TV]|[{I|L}S]}QVTQA{I|L};{[TV]|[{I|L}S]}QTVQA{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]T[AG]A{I|L};{[TV]|[{I|L}S]}[AG]VTQA{I|L};{[TV]|[{I|L}S]}QVT[AG]A{I|L};{[TV]|[{I|L}S]}[AG]TVQA{I|L};{[TV]|[{I|L}S]}QTV[AG]A{I|L};[QT]VVTQA{I|L};[QT]VTVQA{I|L} 3.812;3.462;3.4619;2.7331;2.3831;2.3831;2.383;2.383;1.9808;1.9807 +;-;-;-;-;-;-;-;-;- + 166 1 1.846 47041.2 1.0 2359 3347 5706 DOHH2_400M_050219_2,5708 DOHH2_400M_050219_2,5708,EVAKTQAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5709 30.174 53.0 1159800.0 25 0 107230.0 + 19217 LEGNPDTHSW 10 93 578.2568406600051 1154.49912838681 2 578.2570678591728 MULTI CID FTMS 0 0 0 5706 923336.1875 0.3869416349937757 -3 0.3245849609375 3 Unmodified _LEGNPDTHSW_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 63.960520009940105 0.0261970246776379 2 {I|L}EGN[DP]THSW 10 0 + 76.221 0.0 0.0 6.6021 6.6021 84.877 0.0 0.0 0.0 51.92008053022313 10.65630099269626 10.65630099269626 5.880003999414853 0 1.024227503252014 2.0 1.5044321917401078 0.0 + + {I|L}EGN[DP]THSW;{I|L}EGN[DP]PNNW;{I|L}EG{M(Oxidation (M))|F}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NW;{I|L}EG{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E]NNW;{I|L}{M(Oxidation (M))|F}WSV[C(Carbamidomethyl (C))C]{I|L}Q;{I|L}{M(Oxidation (M))|F}WW{[CT]|[{M(Oxidation (M))|F}G]}NW;{I|L}{M(Oxidation (M))|F}WW[C(Carbamidomethyl (C))C]{I|L}Q;{I|L}{M(Oxidation (M))|F}{[DA]|[EG]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NW;{I|L}{M(Oxidation (M))|F}WW{[QC]|[C(Carbamidomethyl (C))A]}SW;{I|L}{M(Oxidation (M))|F}[NG]W[W{M(Oxidation (M))|F}]W 6.6021;6.0928;4.6166;4.4641;2.5655;2.2419;2.0044;1.6502;1.5099;1.5023 +;-;-;-;-;-;-;-;-;- + 1075 + 1 1.846 50539.6 1.0 2360 3347 5706 DOHH2_400M_050219_2,5709 DOHH2_400M_050219_2,5709,LEGNPDTHSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5710 30.177 152.0 531520.0 25 0 43216.0 + 6185 DTDYRSMEY 9 100 590.2348597577422 1178.4551665822844 2 590.2350341677666 MULTI CID FTMS 0 0 0 5706 488841.71875 0.6878837068462544 -1 0.0933303833007812 4 Unmodified _DTDYRSMEY_ ENSG00000004534|ENST00000266022|RBM6;nc|ENSG00000004534|P78332-3|RBM6 83.42873516780209 0.0166860047644719 2 {[ES]|[DT]|[{I|L}C]}DYRMSEY 9 2 + 54.294 0.0 0.0 4.6072 4.6072 74.309 0.0 0.0 0.0 3.748162098248997 34.9607625286837 3.748162098248997 3.0102999566398125 0 2.1237125054200234 0.0 1.0994850021680094 0.0 {[ES]|[DT]|[{I|L}C]}DYRMSEY;{[ES]|[DT]|[{I|L}C]}DYRSMEY;{[ES]|[DT]|[{I|L}C]}DYRMTDY;{[ES]|[DT]|[{I|L}C]}DYKDMEY;{[ES]|[DT]|[{I|L}C]}DYKMDEY;{[MS]|[{M(Oxidation (M))|F}A]}[YR]EDSEY;{[ES]|[DT]|[{I|L}C]}DYKMEDY;{[ES]|[DT]|[{I|L}C]}DY[C(Carbamidomethyl (C))K]{[QS]|[NT]}Y;{[MS]|[{M(Oxidation (M))|F}A]}[YR]ESDEY;{[MG]|[TS]}[HA]{I|L}EDDEY 4.6072;4.3517;4.0552;4.0141;3.8646;3.4575;3.3126;3.2856;3.0526;3.0254 -;+;-;-;-;-;-;-;-;- + 795 1 1.846 66356.9 1.0 2361 3347 5706 DOHH2_400M_050219_2,5710 DOHH2_400M_050219_2,5710,DTDYRSMEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5711 30.18 131.0 633720.0 25 0 39440.0 + 686 AEMQWKRDY 9 81 613.784522901449 1225.554492869698 2 613.7847778201103 MULTI CID FTMS 0 0 0 5706 466395.125 0.7427044282363203 -1 0.0933303833007812 5 Unmodified _AEMQWKRDY_ ENSG00000140990|ENST00000268668|NDUFB10;nc|ENSG00000140990|O96000-2|NDUFB10 62.86856922530385 0.024493861581232 2 AEMQWKRDY 9 0 + 102.8 0.0 0.0 8.3882 8.3882 89.024 0.0 0.0 0.0 31.96272488392665 6.320232147054057 6.320232147054057 6.320232147054057 0 2.353917193908117 1.6989700043360187 0.8494850021680094 0.7614393726401688 + + AEMQWKRDY;AEMQWKY[RD];AEM[AG]WKRDY;AEM[AG]WKY[RD];AEMQY[WK][RD];AEMQYR{[SA]|[TG]}[RD];AEM[AG]Y[WK][RD];AEM[AG]YR{[SA]|[TG]}[RD];AEMQYR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG];{[CP]|[EA]}MQWKRDY 8.3882;7.8725;7.6368;7.1211;5.8117;5.7744;5.0603;5.0266;4.4922;3.845 +;-;-;-;-;-;-;-;-;+ + 402 + 1 1.846 68349.2 1.0 2362 3347 5706 DOHH2_400M_050219_2,5711 DOHH2_400M_050219_2,5711,AEMQWKRDY True True AEMQWKRDY 30.179764 613.78477782011 17114092.75 5706.0 nc|ENSG00000140990|O96000-2|NDUFB10;;ENSG00000140990|ENST00000268668|NDUFB10 7.668408870697021 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5712 30.185 278.0 397260.0 25 0 65221.0 + 13204 HGLIRKYGL 9 95 528.8191262380976 1055.6236995429952 2 528.8191406130791 MULTI CID FTMS 0 0 0 5706 209642.15625 0.5878957543168418 -1 0.0933303833007812 6 Unmodified _HGLIRKYGL_ ENSG00000213741|ENST00000245458|RPS29;ENST00000496507.1_1_4:25680486-25680639:+|nuORF;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50050387-50052826:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 54.773552608820026 0.0299037012502309 2 HG{I|L}{I|L}RKYG{I|L} 9 0 + 68.571 0.0 0.0 6.4958 6.4958 92.434 0.0 0.0 0.0 38.13826945759829 6.091985184954254 6.091985184954254 18.494850021680094 0 2.190614065464281 1.0 0.0 0.3054621874040891 + + HG{I|L}{I|L}RKYG{I|L};H{I|L}G{I|L}RKYG{I|L};{I|L}HG{I|L}RKYG{I|L};{[HG]|PP}{I|L}{I|L}RKYG{I|L};[H{I|L}]G{I|L}RKYG{I|L};{[VA]|[{I|L}G]}H{I|L}RKYG{I|L} 6.4958;4.7438;3.9512;2.907;2.1711;1.1808 +;-;-;+;-;- + 278 + 1 1.846 89403.4 1.0 2363 3347 5706 DOHH2_400M_050219_2,5712 DOHH2_400M_050219_2,5712,HGLIRKYGL True True HGLIRKYGL 30.184895 528.819140613079 2118891.25 5706.0 ENSG00000213741|ENST00000245458|RPS29;;ENST00000496507.1_1_4:25680486-25680639:+|nuORF;;nc|ENSG00000213741|P62273-2|RPS29;;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;;ENST00000557367.2_1_14:50050387-50052826:-|nuORF 6.018431504567464 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5713 30.19 255.0 302960.0 25 0 22284.0 + 40726 VLHVKTESL 9 112 513.3028239373084 1024.5910949414167 2 513.3036376833916 MULTI CID FTMS 0 0 0 5706 161978.421875 1.0 0 0.0 7 Unmodified _VLHVKTESL_ ENSG00000213676|ENST00000375203|ATF6B;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;nc|ENSG00000213676|Q99941-2|ATF6B 34.40172386719151 0.1061884637610825 2 V{I|L}HV 4 5 55.946 0.0 0.0 5.4603 0.0 0.0 0.0 573.2874849908811 573.2874849908811 41.90039677314668 0.0 0.0 0.0 0 0.8778623208748889 1.5228787452803376 0.0 0.0 + V{I|L}HV 5.4603 + + 184 + 1 1.846 63688.9 1.0 2364 3347 5706 DOHH2_400M_050219_2,5713 DOHH2_400M_050219_2,5713,VLHVKTESL True True VLHVKTESL 30.189637 513.303637683392 728973.25 5706.0 ENSG00000213676|ENST00000375203|ATF6B;;ENST00000495579.5_1_6:32088425-32095984:-|nuORF;;nc|ENSG00000213676|Q99941-2|ATF6B 4.907729625701904 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5714 30.193 142.0 804900.0 25 0 119030.0 + 31485 RPYAKHWL 8 107 357.53466131362694 1069.5821545410809 3 357.5342285037041 MULTI CID FTMS 0 0 0 5706 135996.671875 0.3067410029012826 -2 0.2139339447021484 8 Unmodified _RPYAKHWL_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 23.1484247019978 0.5573009939494978 2 {I|L}{[CT]|[{M(Oxidation (M))|F}G]}HK 5 7 18.768 0.0 0.0 1.7547 0.0 0.0 0.0 484.2305086725219 484.2305086725219 6.778259348524358 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {I|L}{[CT]|[{M(Oxidation (M))|F}G]}HK 1.7547 - 84 + 1 1.846 97241.9 1.0 2365 3347 5706 DOHH2_400M_050219_2,5714 DOHH2_400M_050219_2,5714,RPYAKHWL False True RPYAKHWL 30.192501 357.534228503704 3461485.75 5706.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 4.218229293823242 3.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5715 30.197 268.0 296960.0 25 0 27678.0 + 322 AEAEKTFSY 9 102 523.2452057241128 1044.4758585150255 2 523.2449828982353 MULTI CID FTMS 0 0 0 5706 82381.953125 0.0963633121003462 -3 0.3245849609375 9 Unmodified _AEAEKTFSY_ ENSG00000196655|ENST00000533632|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889505-118889751:+|nuORF;nc|ENSG00000196655|Q9Y296-2|TRAPPC4 45.69961567697781 0.0497987121815769 2 {[CP]|[EA]}KT{M(Oxidation (M))|F}SY{[CP]|[EA]} 9 4 + 41.538 0.0 0.0 3.9769 3.9769 69.11 0.0 0.0 0.0 0.7496819683475522 4.864692631441777 0.7496819683475522 0.7496819683475522 0 0.5 0.0 0.6694451763165201 0.0 {[CP]|[EA]}KT{M(Oxidation (M))|F}SY{[CP]|[EA]};{[CP]|[EA]}AE{[QS]|[NT]}T[VG][PG];[TA][VG]T{M(Oxidation (M))|F}SY{[CP]|[EA]};{[CP]|[EA]}[HM]{M(Oxidation (M))|F}T[VG][PG];{[CP]|[EA]}AE{[QS]|[NT]}{[QV]|[N{I|L}]|[RA]|[KV]}[PS];{[CP]|[EA]}AE{[QS]|[NT]}[KA][DP];{[TV]|[{I|L}S]}QT{M(Oxidation (M))|F}SY{[CP]|[EA]};{[CP]|[EA]}KTYYA{[CP]|[EA]};{[CP]|[EA]}A[H{I|L}]{[NV]|[RG]}EY;{[CP]|[EA]}AEK[WQ][PS] 3.9769;3.9051;3.2162;2.7875;2.5667;2.4664;2.448;2.1934;2.1095;2.0867 -;-;-;-;-;-;-;-;-;- 456 1 1.846 65431.2 1.0 2366 3347 5706 DOHH2_400M_050219_2,5715 DOHH2_400M_050219_2,5715,AEAEKTFSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5716 30.202 226.0 447620.0 25 0 146680.0 + 20285 LLDVLDEI 8 97 465.2625927192436 0 465.2625305056572 PEAK CID FTMS 0 0 0 5706 196333.015625 0.249781334958823 -3 0.3245849609375 10 Unmodified _LLDVLDEI_ REV__ENSG00000196074|ENST00000357552|SYCP2;REV__ENST00000476314.1_1_20:58494499-58496505:-|nuORF 5.760428011301431 0.5786759180849727 2 W 1 -1 3.9794 0.0 0.0 0.42858 0.0 0.0 463.2919873410278 276.12473474674067 739.4167220877684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.42858 - 11 + 1 1.846 82466.2 1.0 2367 3347 5706 DOHH2_400M_050219_2,5716 DOHH2_400M_050219_2,5716,LLDVLDEI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5717 30.211 537.0 237870.0 25 0 19668.0 + 25730 NIKQKMQEL 9 133 566.3137337892933 1130.6129146453866 2 566.3140136599541 MULTI CID FTMS 0 0 0 5706 163330.5 1.0 0 0.0 11 Unmodified _NIKQKMQEL_ ENSG00000011426|ENST00000265748|ANLN;nc|ENSG00000011426|Q9NQW6-2|ANLN 78.7280429016045 0.0178249292250809 2 {[QV]|[N{I|L}]|[RA]|[KV]}KQ{M(Oxidation (M))|F}G[QP]S{I|L} 10 4 + 64.927 0.0 0.0 5.7427 5.7427 85.75 0.0 0.0 0.0 46.90878547881344 14.068043921522538 14.068043921522538 9.164539485499262 0 0.9361818737241734 2.0 0.9119543704721592 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}KQ{M(Oxidation (M))|F}G[QP]S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K[AG]{M(Oxidation (M))|F}G[QP]S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KQ{[NV]|[RG]}{[ES]|[DT]|[{I|L}C]}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K[YE][HK]S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K[{I|L}P]M{[ES]|[DT]|[{I|L}C]}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KC(Carbamidomethyl (C))KE{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}KQKMQE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KC(Carbamidomethyl (C))KN{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KC(Carbamidomethyl (C))KVQE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KQKA[WP]{M(Oxidation (M))|F} 5.7427;4.9321;4.3871;4.1776;4.0503;3.9366;3.7556;3.7088;3.5796;3.4547 -;-;-;-;-;-;+;-;-;- + 2024 + 1 1.846 98237.9 1.0 2368 3347 5706 DOHH2_400M_050219_2,5717 DOHH2_400M_050219_2,5717,NIKQKMQEL True True NIKQKMQEL 30.211166 566.314013659954 956384.3125 5706.0 ENSG00000011426|ENST00000265748|ANLN;;nc|ENSG00000011426|Q9NQW6-2|ANLN 5.485559781392415 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5719 30.217 156.0 413440.0 25 0 79285.0 + 30627 RFKDRIVSM 9 81 384.5502428729534 1150.6288992190605 3 384.5498840212822 MULTI CID FTMS 0 0 0 5718 168824.140625 0.1302534172889965 2 -0.1404628753662109 1 Unmodified _RFKDRIVSM_ ENSG00000101972|ENST00000371145|STAG2;ENSG00000118007|ENST00000383202|STAG1;nc|ENSG00000101972|Q8N3U4|STAG2;nc|ENSG00000118007|Q8WVM7-2|STAG1 16.149105407346934 0.3995459350917656 2 {M(Oxidation (M))|F}SM 3 6 30.718 0.0 0.0 2.6697 0.0 0.0 767.4719911153478 0.0 767.4719911153478 0.0 21.86690318332652 0.0 0.0 0 0.7614393726401688 0.0 0.2302046884880938 0.0 {M(Oxidation (M))|F}SM 2.6697 - 15 + 1 1.846 55218.9 1.0 2369 3348 5718 DOHH2_400M_050219_2,5719 DOHH2_400M_050219_2,5719,RFKDRIVSM False True RFKDRIVSM 30.216636 384.549884021282 16804921.125 5718.0 ENSG00000101972|ENST00000371145|STAG2;;nc|ENSG00000101972|Q8N3U4|STAG2;;nc|ENSG00000118007|Q8WVM7-2|STAG1;;ENSG00000118007|ENST00000383202|STAG1 5.445258458455403 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5720 30.219 143.0 381760.0 25 0 21627.0 + 32731 SEARKKSW 8 100 496.270520009859 990.526487086518 2 496.2696411013603 MULTI CID FTMS 0 0 0 5718 138032.265625 0.4396672389498709 2 -0.1404628753662109 2 Unmodified _SEARKKSW_ REV__ENSG00000134504|ENST00000580059|KCTD1 14.581692164780916 0.6954967302934248 2 {[QN]|[E{I|L}]|[KN]}[KG][KS]GSW 9 -1 {[QN]|[E{I|L}]|[KN]}[KG][KS]G + + 19.45 -10.335 -1.4776 1.9636 1.9636 47.455 0.0 0.0 0.0 0.0 6.686252728754987 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {[QN]|[E{I|L}]|[KN]}[KG][KS]GSW 1.9636 - 103 + 1 1.846 51946.8 1.0 2370 3348 5718 DOHH2_400M_050219_2,5720 DOHH2_400M_050219_2,5720,SEARKKSW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5721 30.223 200.0 313010.0 25 0 25751.0 + -1 AEMQWKRDY 9 84 414.85819282581576 1241.5527490776474 3 414.8571349978447 MULTI CID FTMS 0 0 0 5718 202231.65625 1.0 0 0.0 3 Oxidation (M) _AEM(Oxidation (M))QWKRDY_ nc|ENSG00000140990|O96000-2|NDUFB10;ENSG00000140990|ENST00000268668|NDUFB10 21.799462835604743 0.2538179108695974 2 AE{M(Oxidation (M))|F}QWK 6 -1 68.563 0.0 0.0 5.5223 0.0 0.0 0.0 449.18097864322505 449.18097864322505 57.72537297449868 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.3807196863200844 0.4247425010840047 AE{M(Oxidation (M))|F}QWK 5.5223 + + 130 + 1 1.846 56369.6 1.0 2371 3348 5718 DOHH2_400M_050219_2,5721 DOHH2_400M_050219_2,5721,AEMQWKRDY False False AEMQWKRDY 30.223315 414.857134997845 985048.625 5718.0 nc|ENSG00000140990|O96000-2|NDUFB10;;ENSG00000140990|ENST00000268668|NDUFB10 6.425582408905029 3.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5722 30.237 800.0 312390.0 25 0 42503.0 + 9480 FLDESRSTQY 10 162 623.2910002051295 1244.567447477059 2 623.2895385622978 MULTI CID FTMS 0 0 0 5718 190936.71875 0.023384572573273 -3 0.2633342742919922 4 Unmodified _FLDESRSTQY_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 114.4966697963812 0.0011126474287728 2 {[TV]|[{I|L}S]}[KC]H[TA]ED{I|L}E 11 10 + 67.857 0.0 0.0 5.4523 5.4523 81.498 0.0 0.0 0.0 3.7453507177392 28.64468396822488 3.7453507177392 6.465912507003608 0 1.2302046884880935 1.0 1.0189301784845295 1.5356668758921828 {[TV]|[{I|L}S]}[KC]H[TA]ED{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NG]H[TA]ED{I|L}E;[AG]P{NN|[MP]|[D{I|L}]|[EV]}VTSED{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}ESPD{I|L}{M(Oxidation (M))|F}Y;[AG]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HV]ED{I|L}E;{[ES]|[DT]|[{I|L}C]}RD[RP]ED{I|L}E;{M(Oxidation (M))|F}{I|L}DESTV[HS]NP;{M(Oxidation (M))|F}{I|L}DE[TA]Q[EP]VP;[NP]S[RN][TA]ED{I|L}E;[QP]{NN|[MP]|[D{I|L}]|[EV]}VTSED{I|L}E 5.4523;4.9327;4.7674;4.6391;4.4663;4.4648;4.4428;4.4268;4.4239;4.4172 -;-;-;-;-;-;-;-;-;- 7293 1 1.846 180767.6 0.800000011920929 2372 3348 5718 DOHH2_400M_050219_2,5722 DOHH2_400M_050219_2,5722,FLDESRSTQY True True FLDESRSTQY 30.237151 623.289538562298 126303456.0 5718.0 ENSG00000183207|ENST00000595090|RUVBL2;;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;;nc|ENSG00000183207|Q9Y230-2|RUVBL2 8.297290960947672 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5723 30.244 376.0 255020.0 25 0 23293.0 + -1 ASNDYTQQATQSY 13 120 759.8226314677153 1517.6307100022304 2 759.8212158083916 MULTI CID FTMS 0 0 0 5718 188913.984375 0.8695803055101085 1 -0.0889225006103515 5 Carbamidomethyl (C),Oxidation (M) _QC(Carbamidomethyl (C))QM(Oxidation (M))KEMEQKY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 4.5288652416199255 0.8537804541365391 2 [DN]{[CP]|[EA]}YTQQA 9 -1 31.728 0.0 0.0 2.0906 0.0 0.0 0.0 494.1927160578711 494.1927160578711 9.867574738500345 0.0 0.0 0.0 0 0.2396518287104437 1.5228787452803376 0.6237125054200234 0.7742275032520141 [DN]{[CP]|[EA]}YTQQA 2.0906 - 1220 1 1.846 67569.5 1.0 2373 3348 5718 DOHH2_400M_050219_2,5723 DOHH2_400M_050219_2,5723,QCQMKEMEQKY False False ASNDYTQQATQSY 30.243926 759.821215808392 1495587.125 5718.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 7.245258331298828 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5724 30.252 477.0 205350.0 25 0 15923.0 + -1 DISNENMMC 9 130 544.6903920300651 1087.3662311269302 2 544.6906005740166 MULTI CID FTMS 0 0 0 5718 171443.0 1.0 0 0.0 6 2 Oxidation (M) _DISNENM(Oxidation (M))M(Oxidation (M))C_ REV__ENSG00000007545|ENST00000397412|CRAMP1 4.3292370932331545 0.7635526921153418 2 Y 1 -1 15.59 0.0 0.0 1.4337 0.0 0.0 906.2919493659912 0.0 906.2919493659912 0.0 4.480689732688123 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 Y 1.4337 - 173 + 1 1.846 84727.0 1.0 2374 3348 5718 DOHH2_400M_050219_2,5724 DOHH2_400M_050219_2,5724,DISNENMMC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5725 30.266 800.0 225880.0 25 0 10749.0 + 7837 ELKQRVEAF 9 176 560.3101838234932 1118.6058147137862 2 560.3090698122978 MULTI CID FTMS 0 0 0 5718 97199.2578125 1.0 0 0.0 7 Unmodified _ELKQRVEAF_ ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13753187-13770868:+|nuORF;nc|ENSG00000046651|O75665-2|OFD1;nc|ENSG00000046651|O75665-3|OFD1 83.42873516780209 0.0166860047644719 2 E{I|L}KQ[KT][EP]{M(Oxidation (M))|F} 9 3 + 62.584 0.0 0.0 5.5948 5.5948 74.931 0.0 0.0 0.0 19.77255808556614 0.5225622685225773 0.5225622685225773 0.5225622685225773 0 0.6505149978319906 1.5228787452803376 0.3252574989159953 0.3494850021680094 E{I|L}KQ[KT][EP]{M(Oxidation (M))|F};E{I|L}KQ[KT]{M(Oxidation (M))|F}PE;E{I|L}KQ[KT]{M(Oxidation (M))|F}EP;E{I|L}K[AG][KT]{M(Oxidation (M))|F}PE;E{I|L}K[AG][KT]{M(Oxidation (M))|F}EP;E{I|L}K[HV][Y{I|L}]A{M(Oxidation (M))|F};E{I|L}[HV]K[Y{I|L}]A{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[RN]K{I|L}EA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}TVV{I|L}VEA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}TVVV{I|L}EA{M(Oxidation (M))|F} 5.5948;5.5481;5.4855;4.7249;4.6623;4.4101;4.141;3.8272;3.8206;3.7493 -;-;-;-;-;-;-;-;-;- 834 + 1 1.846 137681.3 0.5699999928474426 2375 3348 5718 DOHH2_400M_050219_2,5725 DOHH2_400M_050219_2,5725,ELKQRVEAF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5726 30.28 800.0 107950.0 25 0 12135.0 28505 PTKVDPFYRH 10 108 630.3286137461114 0 630.2303344607353 PEAK CID FTMS 0 0 0 -1 0 8 Unmodified _PTKVDPFYRH_ ENSG00000158321|ENST00000342771|AUTS2;nc|ENSG00000158321|Q8WXX7-2|AUTS2;nc|ENSG00000158321|Q8WXX7-5|AUTS2 11.494710602746466 0.3634749886926736 2 KE{I|L}TDRH 7 7 24.25 0.0 0.0 1.9267 0.0 0.0 198.10942368187267 178.05071436099846 376.1601380428712 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.4247425010840047 KE{I|L}TDRH 1.9267 - 262 + 1 1.846 68541.8 0.5699999928474426 2376 3348 5718 DOHH2_400M_050219_2,5726 DOHH2_400M_050219_2,5726,PTKVDPFYRH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5727 30.285 260.0 628110.0 25 0 50975.0 + 6880 EEEKNFKAF 9 142 381.189137552203 1140.545583256809 3 381.1888610720634 MULTI CID FTMS 0 0 0 5718 145437.890625 0.1256715199397556 -3 0.2633342742919922 9 Unmodified _EEEKNFKAF_ ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13 28.486842064014134 0.1687311288560894 2 E{M(Oxidation (M))|F}WN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 8 3 33.419 0.0 0.0 2.9301 0.0 0.0 53.04698996868553 0.0 53.04698996868553 0.0 22.309874160695514 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 E{M(Oxidation (M))|F}WN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 2.9301 - 306 + 1 1.846 130034.3 1.0 2377 3348 5718 DOHH2_400M_050219_2,5727 DOHH2_400M_050219_2,5727,EEEKNFKAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5728 30.3 800.0 163170.0 25 0 13765.0 + -1 MHMVLLEMLTY 11 135 706.834536529118 1411.654520125036 2 706.8347656130791 MULTI CID FTMS 0 0 0 5718 121624.0390625 1.0 0 0.0 10 2 Oxidation (M) _M(Oxidation (M))HMVLLEM(Oxidation (M))LTY_ REV__ENSG00000078618|ENST00000352171|NRDC;REV__nc|ENSG00000078618|O43847-2|NRDC 13.042465956692816 0.7638483625850725 2 VVD[WQ]D{I|L}HHTY 11 -1 + 76.859 0.0 0.0 5.4446 5.4446 78.475 0.0 0.0 0.0 45.66087157720621 8.164482558815209 8.164482558815209 3.656210489653475 0 0.9247425010840048 2.0 2.341129063296272 0.0 VVD[WQ]D{I|L}HHTY;VVDP{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}HHTY;VVD[WQ]{I|L}DHHTY;VVDPD[KS]DHHTY;VVD[WQ]{I|L}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TY;VVDPD[KS]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TY;VVD[KC]TD{I|L}QQTY;VVD{[QC]|[C(Carbamidomethyl (C))A]}TD{I|L}QQTY;VVD[WC(Carbamidomethyl (C))]T{I|L}QQTY;VVD[KC]DT{I|L}QQTY 5.4446;5.1856;5.0502;5.0387;4.512;4.5006;4.3437;4.3437;4.1921;4.0618 -;-;-;-;-;-;-;-;-;- 2953 + 1 1.846 91564.0 0.6800000071525574 2378 3348 5718 DOHH2_400M_050219_2,5728 DOHH2_400M_050219_2,5728,MHMVLLEMLTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5730 30.309 334.0 523260.0 25 0 41300.0 + 32817 SEFPGAQHY 9 159 518.2300999080022 1034.4456468828043 2 518.2305175662041 MULTI CID FTMS 0 0 0 5729 239210.203125 0.5413241310836169 3 -0.2323436737060547 1 Unmodified _SEFPGAQHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000566509.5_1_15:73052730-73067416:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-5|ADPGK 26.88365393820708 0.1891292719743517 2 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PGQAHY 9 2 + 34.051 0.0 0.0 3.2917 3.2917 71.577 0.0 0.0 0.0 20.994877211063542 0.3246091534035145 0.3246091534035145 4.313637641589871 0 0.5 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PGQAHY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PGQANW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[HS]{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PQQHY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[AG]AHY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EPGQAHY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PWW[PS];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PQQNW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG[HS]K{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PG{[WT]|[RM]}[DP] 3.2917;2.8747;2.8621;2.6484;2.4016;2.3472;2.2727;2.2314;2.1752;2.1215 -;-;-;-;-;-;-;-;-;- 700 + 1 1.846 136772.5 1.0 2379 3349 5729 DOHH2_400M_050219_2,5730 DOHH2_400M_050219_2,5730,SEFPGAQHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5731 30.311 120.0 377640.0 25 0 43703.0 + 6881 EEEKNFKAF 9 75 571.2801537673649 1140.5457546015298 2 571.2805663943291 MULTI CID FTMS 0 0 0 5729 318351.3125 0.3319296413198828 -2 0.1383228302001953 2 Unmodified _EEEKNFKAF_ ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13 28.486842064014134 0.1687311288560894 2 KA{M(Oxidation (M))|F} 3 6 21.427 0.0 0.0 1.8786 0.0 0.0 776.3354407360986 0.0 776.3354407360986 0.0 8.327731244245342 0.0 0.0 0 0.0 0.0 0.0 0.0 + KA{M(Oxidation (M))|F} 1.8786 + + 26 + 1 1.846 41007.6 1.0 2380 3349 5729 DOHH2_400M_050219_2,5731 DOHH2_400M_050219_2,5731,EEEKNFKAF False True EEEKNFKAF 30.31104 571.280566394329 11109798.5 5729.0 ENST00000399461.8_1_16:89627605-89629447:+|nuORF;;ENSG00000167526|ENST00000311528|RPL13;;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;;nc|ENSG00000167526|P26373-2|RPL13;;ENST00000484610.5_1_16:89627907-89629447:+|nuORF 5.74306583404541 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5732 30.314 166.0 484960.0 25 0 87997.0 22294 LPSAFHIL 8 85 449.2616293140044 896.5087056948088 2 449.2610961794853 MULTI CID FTMS 0 0 0 5729 308842.125 0.075118458700668 7 -0.6840877532958984 3 Unmodified _LPSAFHIL_ ENST00000417775.5_1_1:75184899-75184968:-|nuORF 19.438996006549623 0.6237395211498085 2 {I|L}PG 3 6 43.984 0.0 0.0 4.9062 0.0 0.0 0.0 626.3289278619749 626.3289278619749 30.34762106259212 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}PG 4.9062 - 49 + 1 1.846 67375.6 1.0 2381 3349 5729 DOHH2_400M_050219_2,5732 DOHH2_400M_050219_2,5732,LPSAFHIL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5733 30.318 197.0 251610.0 25 0 26337.0 + 33581 SINPNNHSW 9 89 534.7479264068231 1067.4812998804462 2 534.7466918826103 MULTI CID FTMS 0 0 0 5729 173581.71875 0.3899877484106283 -4 0.3522567749023437 4 Unmodified _SINPNNHSW_ ENSG00000164941|ENST00000523731|INTS8;ENST00000523352.1_1_8:95884148-95885795:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8 22.736283301280096 0.2418982879461534 2 {[TV]|[{I|L}S]}N{[YD]|[{M(Oxidation (M))|F}M]}{[SA]|[TG]}W{I|L} 9 5 + 36.149 0.0 0.0 3.3864 3.3864 70.27 0.0 0.0 0.0 9.877655435829888 4.77121254719663 4.77121254719663 3.0102999566398125 0 0.0 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}N{[YD]|[{M(Oxidation (M))|F}M]}{[SA]|[TG]}W{I|L};{[TV]|[{I|L}S]}N{[YD]|[{M(Oxidation (M))|F}M]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}A{I|L};{[TV]|[{I|L}S]}N{[YD]|[{M(Oxidation (M))|F}M]}{[SA]|[TG]}{I|L}W;{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))G]|[NC]}W{I|L};{[TV]|[{I|L}S]}N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]A{I|L};{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))G]|[NC]}{I|L}W;{[TV]|[{I|L}S]}N[NP]N[C(Carbamidomethyl (C))H]{I|L};{[TV]|[{I|L}S]}N[NP]N[HS]W;[NS]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}{[SA]|[TG]}W{I|L};[NS][W{M(Oxidation (M))|F}]{[ES]|[DT]|[{I|L}C]}W{I|L} 3.3864;3.1044;2.9394;2.8208;2.5758;2.3738;2.1358;2.0455;1.5582;1.3868 -;-;-;-;-;-;-;+;-;- + 241 + 1 1.846 44452.3 1.0 2382 3349 5729 DOHH2_400M_050219_2,5733 DOHH2_400M_050219_2,5733,SINPNNHSW False True SINPNNHSW 30.318084 534.74669188261 2801771.5 5729.0 ENST00000523352.1_1_8:95884148-95885795:+|nuORF;;ENSG00000164941|ENST00000523731|INTS8;;nc|ENSG00000164941|Q75QN2-2|INTS8 4.948061466217041 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5734 30.327 532.0 229770.0 25 0 22292.0 38482 TSDSTVYDY 9 153 525.7167273505153 1049.4189017678304 2 525.7166625857353 MULTI CID FTMS 0 0 0 5729 113180.1328125 1.0 0 0.0 5 Unmodified _TSDSTVYDY_ ENSG00000115944|ENST00000234301|COX7A2L;ENST00000464443.5_1_2:42578361-42588194:-|nuORF 16.942295170755138 0.3780752226737986 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QD]|[EN]|[WG]|[KD]|[RS]}[Y{I|L}]DY 8 4 + 23.266 0.0 0.0 2.2171 2.2171 70.822 0.0 0.0 0.0 1.8394757280294272 3.7106021906302544 1.8394757280294272 5.523787536356572 0 0.0 1.5228787452803376 0.7614393726401688 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QD]|[EN]|[WG]|[KD]|[RS]}[Y{I|L}]DY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QD]|[EN]|[WG]|[KD]|[RS]}V[YE]Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR][YE]Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QD]|[EN]|[WG]|[KD]|[RS]}[NG]TQGP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QD]|[EN]|[WG]|[KD]|[RS]}[NG]TNAP 2.2171;1.6907;1.6361;0.18749;0.1423 -;-;-;-;- 886 + 1 1.846 95659.4 1.0 2383 3349 5729 DOHH2_400M_050219_2,5734 DOHH2_400M_050219_2,5734,TSDSTVYDY False True IIDGKTLKY 30.327451 525.716662585735 1772199.375 5729.0 nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;;nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1;;ENSG00000124406|ENST00000381668|ATP8A1 4.046626091003418 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5735 30.341 800.0 196720.0 25 0 10141.0 + 6936 EEGDRVITY 9 179 541.2615840486148 1080.5086151640296 2 541.2608520388603 MULTI CID FTMS 0 0 0 5729 110661.859375 0.1900623776612617 4 -0.3483905792236328 6 Unmodified _EEGDRVITY_ ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A 27.628801355627647 0.1796483985696185 2 EE[KG]NQ{I|L}TY 9 3 + 35.963 0.0 0.0 3.3284 3.3284 70.622 0.0 0.0 0.0 3.4967757820194336 12.375079869619242 3.4967757820194336 3.467874862246568 0 0.5484550065040281 1.6989700043360187 0.2396518287104437 0.0 EE[KG]NQ{I|L}TY;EE[W{I|L}]Q{I|L}TY;[QA]T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}TY;[QA]E[QT]Q{I|L}TY;EE[KG]N[WR]Y;[QA]T{I|L}[WC(Carbamidomethyl (C))]R{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}]TK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TY;[QA]T{I|L}V[C(Carbamidomethyl (C))S]R{M(Oxidation (M))|F};{[NV]|[RG]}S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}TY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HHV{I|L}G[QP] 3.3284;3.0074;2.9327;2.6541;1.9994;1.8515;1.825;1.8041;1.756;1.7531 -;-;-;-;-;-;-;-;-;- 1251 + 1 1.846 121799.5 0.6000000238418579 2384 3349 5729 DOHH2_400M_050219_2,5735 DOHH2_400M_050219_2,5735,EEGDRVITY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5736 30.346 253.0 250290.0 25 0 29877.0 + 7176 EEPSRPSASW 10 98 573.2658450490193 1144.5171371648385 2 573.2654296755791 MULTI CID FTMS 0 0 0 5729 79502.2265625 0.40719437408863 -3 0.2316532135009765 7 Unmodified _EEPSRPSASW_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000545049.1_1_12:2977686-2983239:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 17.11289562659939 0.5604042439455784 2 EEA 3 7 30.731 0.0 0.0 2.685 0.0 0.0 0.0 812.364432657279 812.364432657279 14.532796692927263 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3054621874040891 0.0 EEA 2.685 - 91 1 1.846 56026.3 1.0 2385 3349 5729 DOHH2_400M_050219_2,5736 DOHH2_400M_050219_2,5736,EEPSRPSASW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5737 30.348 79.0 611190.0 25 0 56511.0 + 11118 GEGGLQWSF 9 73 490.7252006447551 979.4358483563102 2 490.7250549197197 MULTI CID FTMS 0 0 0 5729 553869.9375 0.0927988735357812 6 -0.5684337615966797 8 Unmodified _GEGGLQWSF_ REV__ENST00000482294.1_1_22:39545359-39545569:-|nuORF 26.268140514670165 0.1969607489560049 2 S{M(Oxidation (M))|F} 2 -1 32.717 0.0 0.0 3.3403 0.0 0.0 727.3245250186117 0.0 727.3245250186117 0.0 26.77440017027358 0.0 0.0 0 0.8494850021680094 0.0 0.3252574989159953 0.0 S{M(Oxidation (M))|F} 3.3403 + + 34 + 1 1.846 42717.4 1.0 2386 3349 5729 DOHH2_400M_050219_2,5737 DOHH2_400M_050219_2,5737,GEGGLQWSF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5738 30.352 202.0 461970.0 25 0 110200.0 + -1 FVDKPVAY 8 89 470.2563838616823 469.2491073950823 1 470.2560607790947 MULTI CID FTMS 0 0 0 5729 238946.765625 0.9349167979546584 -2 0.1383228302001953 9 nc|ENSG00000115750|Q53T94-3|TAF1B;nc|ENSG00000115750|Q53T94-2|TAF1B;ENSG00000115750|ENST00000263663|TAF1B 2 AY 2 -1 15.573 0.0 0.0 3.3187 0.0 0.0 217.1375331536745 0.0 217.1375331536745 0.0 0.934406614145466 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 3.3187 - 26 + 1 1.846 75008.5 1.0 2387 3349 5729 DOHH2_400M_050219_2,5738 DOHH2_400M_050219_2,5738, False False FVDKPVAY 30.351652 470.256060779095 1373072.625 5729.0 nc|ENSG00000115750|Q53T94-3|TAF1B;;nc|ENSG00000115750|Q53T94-2|TAF1B;;ENSG00000115750|ENST00000263663|TAF1B 5.221455732981364 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5740 30.356 13.0 3589000.0 25 0 252640.0 + 26437 NTDSPLRY 8 78 483.2381113576644 964.4616697821288 2 483.2379638552666 MULTI CID FTMS 0 0 0 5739 4574342.0 0.1284798759495115 7 -0.7054710388183594 1 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 54.773552608820026 0.1167943196628344 2 {[QS]|[NT]}DSP{I|L}RY 8 0 + 69.391 0.0 0.0 7.1947 7.1947 95.665 0.0 0.0 0.0 58.94524706148886 11.638568026386691 11.638568026386691 31.08562371604336 0 0.4247425010840047 2.0 0.0 0.6549471895720984 + + {[QS]|[NT]}DSP{I|L}RY;{[QS]|[NT]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}HRY 7.1947;3.9716 +;- + 121 + 1 1.846 44422.2 1.0 2388 3350 5739 DOHH2_400M_050219_2,5740 DOHH2_400M_050219_2,5740,NTDSPLRY True True NTDSPLRY 30.356273 483.237963855267 1232551280.0 5739.0 ENST00000478027.2_1_3:39450050-39453856:+|nuORF;;ENSG00000168028|ENST00000301821|RPSA;;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 7.853315035502116 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5741 30.357 35.0 1438300.0 25 0 215380.0 + 484 AEGIHTGQF 9 68 480.232895107016 958.451237280832 2 480.2328063845634 MULTI CID FTMS 0 0 0 5739 1439843.25 0.4254893346062957 2 -0.1808032989501953 2 Unmodified _AEGIHTGQF_ ENSG00000161016|ENST00000528957|RPL8;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;ENST00000531767.1_1_8:146017155-146017514:-|nuORF 29.081581746732265 0.1611639662936252 2 [TA][HV]GQAE{M(Oxidation (M))|F} 9 6 + 35.142 0.0 0.0 3.6665 3.6665 79.269 0.0 0.0 0.0 2.4852871524492386 23.15220933317861 2.4852871524492386 9.208187539523756 0 0.3807196863200844 0.0 0.3252574989159953 0.0 [TA][HV]GQAE{M(Oxidation (M))|F};[TA][HV]G[AG]AE{M(Oxidation (M))|F};[HT]{[VA]|[{I|L}G]}GQAE{M(Oxidation (M))|F};{[CP]|[EA]}[HK]QAE{M(Oxidation (M))|F};[TA][HN]{[VA]|[{I|L}G]}AE{M(Oxidation (M))|F};[TA][HV]QQE{M(Oxidation (M))|F};[HT]{[QV]|[N{I|L}]|[RA]|[KV]}QAE{M(Oxidation (M))|F};[TA][HN][Q{I|L}]E{M(Oxidation (M))|F};[TA][{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F};[HT]{[VA]|[{I|L}G]}G[AG]AE{M(Oxidation (M))|F} 3.6665;2.7058;2.5979;2.5966;2.5221;2.1602;1.922;1.8462;1.6624;1.6372 -;-;-;-;-;-;-;-;-;- 254 1 1.846 47448.0 1.0 2389 3350 5739 DOHH2_400M_050219_2,5741 DOHH2_400M_050219_2,5741,AEGIHTGQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5742 30.359 71.0 969420.0 25 0 134520.0 + 29816 QQIQKVVM 8 98 487.2784972514205 972.5424415696408 2 487.2779418826103 MULTI CID FTMS 0 0 0 5739 538589.75 0.5294936773960773 -1 0.0515403747558593 3 Unmodified _QQIQKVVM_ ENSG00000161960|ENST00000293831|EIF4A1;ENST00000550578.1_1_12:53547103-53547616:+|nuORF;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1 56.541270873467816 0.1144128637334507 2 VM 2 6 24.222 0.0 0.0 2.4906 0.0 0.0 724.4225818057722 0.0 724.4225818057722 0.0 3.719237805529112 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + VM 2.4906 + + 286 + 1 1.846 56343.5 1.0 2390 3350 5739 DOHH2_400M_050219_2,5742 DOHH2_400M_050219_2,5742,QQIQKVVM True True QQIQKVVM 30.359115 487.27794188261 5166947.0 5739.0 ENST00000550578.1_1_12:53547103-53547616:+|nuORF;;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF 5.432010968526204 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5743 30.363 175.0 337300.0 25 0 26149.0 + 10451 FTEQYNEQY 9 94 611.2566201557208 0 611.2567016482353 PEAK CID FTMS 0 0 0 5739 327151.375 0.2640005866655046 3 -0.2968502044677734 4 Unmodified _FTEQYNEQY_ ENSG00000173914|ENST00000310046|RBM4B 71.92227651296345 0.0171259190214613 2 ENYVDY 6 6 42.731 0.0 0.0 3.5011 0.0 0.0 309.1327948995291 125.0360048883422 434.1687997878713 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 1.281234684152075 0.4247425010840047 ENYVDY 3.5011 - 141 + 1 1.846 47894.7 1.0 2391 3350 5739 DOHH2_400M_050219_2,5743 DOHH2_400M_050219_2,5743,FTEQYNEQY True True FTEQYNEQY 30.362533 611.256701648235 21159458.0 5739.0 ENSG00000173914|ENST00000310046|RBM4B 7.425209363301595 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5744 30.365 100.0 858650.0 25 0 165600.0 5515 DLVVKKEL 8 97 472.2948157302167 942.5750785272334 2 472.2946044802666 MULTI CID FTMS 0 0 0 5739 313721.1875 0.43490227619472 -1 0.0515403747558593 5 Unmodified _DLVVKKEL_ ENSG00000183624|ENST00000383463|HMCES 26.268140514670165 0.4916104673212489 2 D{I|L}VVK 5 3 64.196 0.0 0.0 6.8107 0.0 0.0 0.0 385.2092195909467 385.2092195909467 51.54438744963621 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + D{I|L}VVK 6.8107 + + 150 + 1 1.846 72646.3 1.0 2392 3350 5739 DOHH2_400M_050219_2,5744 DOHH2_400M_050219_2,5744,DLVVKKEL False True DLVVKGSLL 30.364675 472.294604480267 2851947.0 5739.0 ENSG00000166106|ENST00000299164|ADAMTS15 0.3933738271395365 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5745 30.369 229.0 417270.0 25 0 51421.0 + 25899 NLKEKIKEL 9 112 557.8454443912246 0 557.8456909060478 PEAK CID FTMS 0 0 0 5739 251738.0625 1.0 0 0.0 6 Unmodified _NLKEKIKEL_ ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A 35.61225514009592 0.0832881035976632 2 EK{I|L}NKK 6 6 21.487 0.0 0.0 1.9293 0.0 0.0 131.09799260945675 239.1043490045532 370.2023416140099 0.0 0.0 0.0 0.0 0 0.6923877696554315 0.0 0.0 0.3494850021680094 EK{I|L}NKK 1.9293 - 266 + 1 1.846 77126.0 1.0 2393 3350 5739 DOHH2_400M_050219_2,5745 DOHH2_400M_050219_2,5745,NLKEKIKEL True True NLKEKIKEL 30.368996 557.845690906048 1404929.875 5739.0 ENSG00000004487|ENST00000400181|KDM1A;;nc|ENSG00000004487|O60341|KDM1A 5.043529669443767 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5746 30.372 172.0 433080.0 25 0 119510.0 + 6421 EAANKVVL 8 86 422.250391472127 842.486230011054 2 422.2502319216728 MULTI CID FTMS 0 0 0 5739 230600.46875 0.1685673630747033 3 -0.2968502044677734 7 Unmodified _EAANKVVL_ ENSG00000169019|ENST00000381571|COMMD8 20.871210003555333 0.6025813472596342 2 VVKWY 5 7 21.028 0.0 0.0 2.4959 0.0 0.0 149.11185364562272 0.0 149.11185364562272 0.0 4.573903994775286 0.0 0.0 0 0.0 0.0 0.0 0.5 VVKWY 2.4959 - 100 + 1 1.846 64766.8 1.0 2394 3350 5739 DOHH2_400M_050219_2,5746 DOHH2_400M_050219_2,5746,EAANKVVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5747 30.379 364.0 287980.0 25 0 28049.0 + 612 AEKELTDRNW 10 103 631.3114852694594 1260.6084176057186 2 631.3110229372978 MULTI CID FTMS 0 0 0 5739 203637.03125 0.764264847864454 -1 0.0515403747558593 8 Unmodified _AEKELTDRNW_ ENSG00000093000|ENST00000347635|NUP50;ENST00000497960.5_1_22:45560109-45567681:+|nuORF 68.75988807550267 0.0189765623365881 2 WAAE{I|L}TDRNW 10 3 + 70.219 0.0 0.0 5.5703 5.5703 74.961 0.0 0.0 0.0 0.3689310708045923 0.5799194697768684 0.3689310708045923 0.5799194697768684 0 1.8539171939081167 0.0 0.4247425010840047 1.1549471895720984 WAAE{I|L}TDRNW;WAAE{I|L}TDRHY;{[CT]|[{M(Oxidation (M))|F}G]}NRDT{I|L}EAAPA;{[CP]|[EA]}EKA{[MS]|[{M(Oxidation (M))|F}A]}GEAAPA;WAAE{I|L}TDW[RN];WAAE{I|L}TDRGGW;{[CP]|[EA]}KEA{[MS]|[{M(Oxidation (M))|F}A]}GEAAPA;{[CP]|[EA]}EKA{[MS]|[{M(Oxidation (M))|F}A]}WAAPA;[VS][C(Carbamidomethyl (C))K]DT{I|L}EAAPA;{[CP]|[EA]}K[R{M(Oxidation (M))|F}]DGEAAPA 5.5703;5.5242;5.129;5.1034;4.9514;4.8433;4.6809;4.6711;4.6498;4.6178 -;-;-;-;-;-;-;-;-;- 3230 + 1 1.846 82906.1 1.0 2395 3350 5739 DOHH2_400M_050219_2,5747 DOHH2_400M_050219_2,5747,AEKELTDRNW True True AEKELTDRNW 30.378908 631.311022937298 1295526.75 5739.0 ENST00000497960.5_1_22:45560109-45567681:+|nuORF;;ENSG00000093000|ENST00000347635|NUP50 7.199658552805583 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5748 30.382 128.0 367180.0 25 0 23658.0 + 584 AEIQHAEEF 9 87 537.2482903983821 1072.482027863564 2 537.2473632693291 MULTI CID FTMS 0 0 0 5739 124017.4453125 1.0 0 0.0 9 Unmodified _AEIQHAEEF_ ENSG00000130826|ENST00000369550|DKC1;ENST00000473552.1_1_X:153991228-153994704:+|nuORF;nc|ENSG00000130826|O60832-2|DKC1 28.49450938151212 0.1686335738423394 2 {[CP]|[EA]}{I|L}QHAEE{M(Oxidation (M))|F} 9 0 + 31.833 0.0 0.0 2.9681 2.9681 48.827 0.0 0.0 0.0 0.6028029696927497 17.880325230808154 0.6028029696927497 0.0 0 1.1989700043360187 0.0 0.0 0.0 + + {[CP]|[EA]}{I|L}QHAEE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}QHEAE{M(Oxidation (M))|F};[HA][Q{I|L}]EEAE{M(Oxidation (M))|F};[HA][Q{I|L}]EAEE{M(Oxidation (M))|F};{[CP]|[EA]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}E{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F};[TA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[Q{I|L}]AE{M(Oxidation (M))|F};[HA]EE[Q{I|L}]AE{M(Oxidation (M))|F};{[MG]|[TS]}{[YD]|[{M(Oxidation (M))|F}M]}[Q{I|L}]AE{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}KKE{M(Oxidation (M))|F} 2.9681;2.9681;2.2052;2.2052;1.4052;1.3202;0.85403;0.61601;0.05967 +;-;-;-;-;-;-;-;- + 236 1 1.846 40294.1 1.0 2396 3350 5739 DOHH2_400M_050219_2,5748 DOHH2_400M_050219_2,5748,AEIQHAEEF False True AEIQHAEEF 30.381544 537.247363269329 701770.0 5739.0 nc|ENSG00000130826|O60832-2|DKC1;;ENST00000473552.1_1_X:153991228-153994704:+|nuORF;;ENSG00000130826|ENST00000369550|DKC1 5.018961747487386 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5749 30.385 175.0 212680.0 25 0 12126.0 + 32963 SELRSQSW 8 82 496.7430347836019 0 496.7436706423759 PEAK CID FTMS 0 0 0 5739 112370.4140625 0.7642906233803195 1 -0.0796375274658203 10 Unmodified _SELRSQSW_ ENSG00000111615|ENST00000229214|KRR1 19.256988751693697 0.4320151646958274 2 S 1 7 13.979 0.0 0.0 1.41 0.0 0.0 700.3488187353695 201.06734644107652 901.416165176446 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + S 1.41 + + 16 + 1 1.846 33451.8 1.0 2397 3350 5739 DOHH2_400M_050219_2,5749 DOHH2_400M_050219_2,5749,SELRSQSW False True SELRSQSW 30.384946 496.743670642376 943253.5 5739.0 ENSG00000111615|ENST00000229214|KRR1 4.406272013982137 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5750 30.391 347.0 243240.0 25 0 57302.0 + 14567 IHRQVCLFI 9 103 376.8841318618013 0 376.8839904665947 PEAK CID FTMS 0 0 0 5739 102567.75 1.0 0 0.0 11 Unmodified _IHRQVCLFI_ REV__ENST00000400000.6_1_18:9954209-9954779:+|nuORF 5.731851221503515 0.3444685223463734 2 K 1 -1 6.9897 0.0 0.0 0.92979 0.0 0.0 129.39813325309632 491.2365511529906 620.634684406087 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.92979 - 8 + 1 1.846 73735.2 1.0 2398 3350 5739 DOHH2_400M_050219_2,5750 DOHH2_400M_050219_2,5750,IHRQVCLFI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5751 30.399 408.0 177540.0 25 0 21592.0 + + 6208 KRSTYNYSL 9 109 566.2935147815489 0 566.2921630740166 PEAK CID FTMS 0 0 0 5739 86398.6484375 1.0 0 0.0 12 Unmodified _DTKEWPRSL_ ENSG00000148308|ENST00000372097|GTF3C5;nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5 32.78568957990786 0.0971838787772021 2 YN 2 -1 21.326 0.0 0.0 1.8863 0.0 0.0 218.13029020587263 632.3175142877561 850.4478044936288 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.7742275032520141 YN 1.8863 - 134 + 1 1.846 58037.4 1.0 2399 3350 5739 DOHH2_400M_050219_2,5751 DOHH2_400M_050219_2,5751,DTKEWPRSL False False KRSTYNYSL 30.398519 566.292163074017 561313.9375 5739.0 ENSG00000148308|ENST00000372097|GTF3C5;;nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5 0.2236669758955637 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5752 30.402 205.0 441410.0 25 0 228360.0 -1 0 52 492.26215141584686 491.25487494924687 1 492.2617065310478 MULTI CID FTMS 0 0 0 5739 241692.765625 0.3536838013147019 -4 0.2831935882568359 13 2 Y 1 -1 16.99 0.0 0.0 3.4584 0.0 0.0 310.18039482405 0.0 310.18039482405 0.0 5.569716761534185 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.4584 - 10 + 1 1.846 76980.7 1.0 2400 3350 5739 DOHH2_400M_050219_2,5752 DOHH2_400M_050219_2,5752, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5753 30.416 800.0 134250.0 25 0 6127.5 + 8238 EQASTAAM 8 96 808.3515736355143 807.3442971689143 1 808.3500244021416 MULTI CID FTMS 0 0 0 5739 158277.484375 0.1177248824210743 4 -0.4105167388916015 14 Unmodified _EQASTAAM_ REV__LRRTM1|p.M483T|1|0.2|ENSG00000162951|chr2:80302372-80302372|A/G|missense_variant 20.871210003555333 0.6025813472596342 2 [QT]Y{M(Oxidation (M))|F}SY 6 -1 + 60.212 0.0 0.0 7.458 7.458 86.362 0.0 0.0 0.0 12.204999916446797 12.703037561203844 12.204999916446797 5.013487579716767 0 0.6861818737241735 1.0457574905606752 1.5994850021680094 0.3252574989159953 [QT]Y{M(Oxidation (M))|F}SY;[QT]YS{M(Oxidation (M))|F}Y;[Y{M(Oxidation (M))|F}]QTSY;{M(Oxidation (M))|F}YQTSY;[QT]YSY{M(Oxidation (M))|F};[YQ]{M(Oxidation (M))|F}TSY;Y{M(Oxidation (M))|F}QTSY;[DP]P{[ET]|[MV]}SY;[Y{M(Oxidation (M))|F}][AG]TSY;{M(Oxidation (M))|F}Y[AG]TSY 7.458;6.837;5.9463;5.7203;5.4933;5.3586;5.1096;4.9408;4.7795;4.5535 -;-;-;-;-;-;-;-;-;- 519 1 1.846 83542.9 0.7300000190734863 2401 3350 5739 DOHH2_400M_050219_2,5753 DOHH2_400M_050219_2,5753,EQASTAAM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5754 30.431 800.0 166870.0 25 0 9522.5 + 8465 ESSSTNAMEQK 11 164 606.2625228489991 1210.510492764798 2 606.2622558474541 MULTI CID FTMS 0 0 0 5739 113974.296875 1.0 0 0.0 15 Unmodified _ESSSTNAMEQK_ REV__ENST00000444886.1_1_9:128358162-128358726:+|nuORF 12.240655878213236 0.7805268987462184 2 [NS]Q 3 -1 15.603 0.0 0.0 1.2889 0.0 0.0 0.0 878.3570765657136 878.3570765657136 1.623402882972373 0.0 0.0 0.0 0 0.0 0.0 0.566901560044258 0.4247425010840047 [NS]Q 1.2889 - 351 1 1.846 97273.1 0.6299999952316284 2402 3350 5739 DOHH2_400M_050219_2,5754 DOHH2_400M_050219_2,5754,ESSSTNAMEQK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5756 30.436 37.0 1235200.0 25 0 129590.0 + 19218 LEGNPDTHSW 10 72 578.2568406600051 1154.49912838681 2 578.2569457888603 MULTI CID FTMS 0 0 0 5755 1436888.375 0.6021554712714534 1 -0.101165771484375 1 Unmodified _LEGNPDTHSW_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 75.76082778847304 0.0187510588500744 2 {[QN]|[E{I|L}]|[KN]}GNPDTHSW 10 0 + 82.757 0.0 0.0 7.1682 7.1682 94.701 0.0 0.0 0.0 64.54008347803827 11.53212513775344 11.53212513775344 21.09673323955724 0 1.0317183090963749 2.0 1.579689690656103 0.4247425010840047 + + {[QN]|[E{I|L}]|[KN]}GNPDTHSW;{[QN]|[E{I|L}]|[KN]}[HM]DTHSW;{[QN]|[E{I|L}]|[KN]}GETD[HN][Q{I|L}];{[QN]|[E{I|L}]|[KN]}GNPDP[DC][VP];{[QN]|[E{I|L}]|[KN]}[CS]PD[HN][Q{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HN]DTHSW;{[QN]|[E{I|L}]|[KN]}GN[Y{M(Oxidation (M))|F}][DG][Q{I|L}];{[QN]|[E{I|L}]|[KN]}GN[Y{M(Oxidation (M))|F}][NG]{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}[CS][{M(Oxidation (M))|F}E]W{[QN]|[E{I|L}]|[KN]};[{I|L}T][DC]PD[HN][Q{I|L}] 7.1682;5.3409;4.6234;3.5814;2.6966;2.6501;2.2905;2.138;1.4578;0.79186 +;-;-;-;-;-;-;-;-;- + 360 + 1 1.848 39775.3 1.0 2403 3351 5755 DOHH2_400M_050219_2,5756 DOHH2_400M_050219_2,5756,LEGNPDTHSW True True LEGNPDTHSW 30.436106 578.25694578886 35827056.0 5755.0 nc|ENSG00000143569|Q14157-1|UBAP2L;;nc|ENSG00000143569|Q14157-4|UBAP2L;;nc|ENSG00000143569|Q14157-5|UBAP2L;;nc|ENSG00000143569|Q14157-3|UBAP2L;;ENSG00000143569|ENST00000428931|UBAP2L 8.485169728597006 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5757 30.44 227.0 298690.0 25 0 19481.0 + 685 AEMQWKRDY 9 83 409.525496554986 1225.5546602651582 3 409.5255004763603 MULTI CID FTMS 0 0 0 5755 193240.53125 0.1527835895268734 3 -0.3308792114257812 2 Unmodified _AEMQWKRDY_ ENSG00000140990|ENST00000268668|NDUFB10;nc|ENSG00000140990|O96000-2|NDUFB10 28.49450938151212 0.1686335738423394 2 AEMQWK 6 3 68.448 0.0 0.0 5.5851 0.0 0.0 0.0 449.1804903619751 449.1804903619751 61.45873464120562 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.5 0.5 + AEMQWK 5.5851 + + 265 + 1 1.848 61859.0 1.0 2404 3351 5755 DOHH2_400M_050219_2,5757 DOHH2_400M_050219_2,5757,AEMQWKRDY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5758 30.442 78.0 792280.0 25 0 85239.0 8622 EVEEDEYKAFY 11 84 711.3076877055686 1420.600822477937 2 711.3075439333916 MULTI CID FTMS 0 0 0 5755 546142.4375 0.0180302070978627 -2 0.1311779022216797 3 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 2 [QA]HDEAQQNA{M(Oxidation (M))|F}Y 12 8 + 70.768 0.0 0.0 4.9815 4.9815 79.925 0.0 0.0 0.0 3.9524249272868417 50.84191931646744 3.9524249272868417 6.505149978319906 0 0.8935078169319297 0.0 0.0 1.1989700043360187 [QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QNA{M(Oxidation (M))|F}Y;[QA]HDEAQN[AG]A{M(Oxidation (M))|F}Y;[QA]HDEAQGGQA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]NQA{M(Oxidation (M))|F}Y;[QA]E[HD]AQQNA{M(Oxidation (M))|F}Y;[QA]HDEA[AG][AG]NA{M(Oxidation (M))|F}Y 4.9815;4.5236;4.3411;4.3411;4.3411;3.8832;3.8832;3.8832;3.8574;3.7025 -;-;-;-;-;-;-;-;-;- 940 1 1.848 50496.2 1.0 2405 3351 5755 DOHH2_400M_050219_2,5758 DOHH2_400M_050219_2,5758,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5759 30.444 69.0 778090.0 25 0 108840.0 + 6572 EALTKEEL 8 89 466.7506857441982 931.4868185551964 2 466.7502624392509 MULTI CID FTMS 0 0 0 5755 516062.59375 1.0 0 0.0 4 Unmodified _EALTKEEL_ ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16552809-16553013:-|nuORF 26.88365393820708 0.4786498634179528 2 {[CP]|[EA]}{I|L}TY 5 4 23.698 0.0 0.0 2.5441 0.0 0.0 0.0 351.1808260553344 351.1808260553344 8.213337517843655 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 {[CP]|[EA]}{I|L}TY 2.5441 - 238 + 1 1.848 50281.1 1.0 2406 3351 5755 DOHH2_400M_050219_2,5759 DOHH2_400M_050219_2,5759,EALTKEEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5760 30.446 112.0 629370.0 25 0 49781.0 + 2542 ASEFPGAQHY 10 93 553.748995242515 1105.48343755183 2 553.7485229372978 MULTI CID FTMS 0 0 0 5755 373794.28125 0.2563985070286024 -2 0.1311779022216797 5 Unmodified _ASEFPGAQHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000566509.5_1_15:73052730-73067416:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-5|ADPGK 41.8396318013385 0.1381409678234242 2 {[SA]|[TG]}E{M(Oxidation (M))|F} 4 6 33.79 0.0 0.0 3.0566 0.0 0.0 0.0 668.2787921263017 668.2787921263017 21.31614048753641 0.0 0.0 0.0 0 1.0 1.0457574905606752 0.8807196863200843 0.0 + {[SA]|[TG]}E{M(Oxidation (M))|F} 3.0566 + + 387 1 1.848 60788.2 1.0 2407 3351 5755 DOHH2_400M_050219_2,5760 DOHH2_400M_050219_2,5760,ASEFPGAQHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5761 30.449 164.0 590000.0 25 0 173250.0 + -1 LDMQPKKQW 9 79 595.3033609823804 1188.5921690315606 2 595.3034545779228 MULTI CID FTMS 0 0 0 5755 334987.8125 0.4465230087681648 -1 0.0796375274658203 6 Oxidation (M) _LDM(Oxidation (M))QPKKQW_ REV__ENSG00000179532|ENST00000254579|DNHD1;REV__ENST00000534210.6_1_11:6559916-6579528:+|nuORF 21.74664581756881 0.2544899275067181 2 {I|L}D 2 -1 48.029 0.0 0.0 4.0408 0.0 0.0 0.0 957.4589560873396 957.4589560873396 32.361463689775306 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.3807196863200844 0.0 {I|L}D 4.0408 + + 40 + 1 1.848 78490.7 1.0 2408 3351 5755 DOHH2_400M_050219_2,5761 DOHH2_400M_050219_2,5761,LDMQPKKQW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5762 30.453 163.0 534410.0 25 0 34756.0 + 8744 EVPFRYHEL 9 96 397.204885686534 0 397.2046996951103 PEAK CID FTMS 0 0 0 5755 250344.609375 0.3426954989618214 -1 0.0796375274658203 7 Unmodified _EVPFRYHEL_ ENSG00000154114|ENST00000683345|TBCEL 29.081581746732265 0.1187435359889091 2 D 1 9 9.732 0.0 0.0 1.2282 0.0 0.0 592.2786698332259 82.0669420831664 674.3456119163923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 D 1.2282 - 9 + 1 1.848 72936.8 1.0 2409 3351 5755 DOHH2_400M_050219_2,5762 DOHH2_400M_050219_2,5762,EVPFRYHEL True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5763 30.457 242.0 355250.0 25 0 44034.0 37531 TLHPVWSQQ 9 112 548.2834825618476 1094.552412190495 2 548.2808105349541 MULTI CID FTMS 0 0 0 5755 192805.546875 0.1339268503801228 17 -1.2572784423828125 8 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 17.44264345198275 0.3645313841742926 2 [{I|L}T]AYPEH[HK] 9 7 + 28.278 0.0 0.0 2.5836 2.5836 68.107 0.0 0.0 0.0 1.3106037455880717 4.28211852677514 1.3106037455880717 2.768024924119672 0 1.711758134947864 0.8538719643217619 0.0 0.0 [{I|L}T]AYPEH[HK];[{I|L}T]HPPEH[HK];{[QN]|[E{I|L}]|[KN]}[WH]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[PG];[{I|L}T]H[MD][{I|L}T][HK];[TA]{I|L}YPEH[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSE[YV][HK];{[QN]|[E{I|L}]|[KN]}[WH]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VS[HV]SH[VP];[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}EH[HK] 2.5836;2.3307;1.2417;1.0209;0.98477;0.72266;0.42134;0.32651;0.12024 -;-;-;-;-;-;-;-;- 302 1 1.848 74671.0 1.0 2410 3351 5755 DOHH2_400M_050219_2,5763 DOHH2_400M_050219_2,5763,TLHPVWSQQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5764 30.471 800.0 242520.0 25 0 28663.0 + 16085 ITQGTPLKY 9 151 510.7900198327652 1019.5654867323304 2 510.7904540896416 MULTI CID FTMS 0 0 0 5755 178734.109375 0.583829913592636 -1 0.0796375274658203 9 Unmodified _ITQGTPLKY_ ENSG00000196498|ENST00000405201|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;nc|ENSG00000196498|Q9Y618-5|NCOR2 84.5221896805406 0.0164210731287474 2 {I|L}TQGTP{I|L}KY 9 0 + 99.351 0.0 0.0 9.7445 9.7445 84.542 0.0 0.0 0.0 36.47817481888637 10.0 10.0 1.7609125905568137 0 0.7742275032520141 2.0 1.3494850021680094 0.7302046884880937 + + {I|L}TQGTP{I|L}KY;{I|L}TQASP{I|L}KY;{I|L}TQAPS{I|L}KY;{I|L}T[AG]GTP{I|L}KY;{I|L}TQGTP{I|L}YK;{I|L}T[AG]ASP{I|L}KY;{I|L}TQASP{I|L}YK;{I|L}T[AG]APS{I|L}KY;{I|L}TQAPS{I|L}YK;{I|L}TQGTPKY{I|L} 9.7445;9.5718;9.3728;8.8413;8.7637;8.6686;8.591;8.4696;8.392;7.9011 +;-;-;-;-;-;-;-;-;- + 2269 + 1 1.848 148487.9 0.699999988079071 2411 3351 5755 DOHH2_400M_050219_2,5764 DOHH2_400M_050219_2,5764,ITQGTPLKY True True ITQGTPLKY 30.470952 510.790454089642 1533422.5 5755.0 nc|ENSG00000196498|Q9Y618-4|NCOR2;;ENSG00000196498|ENST00000405201|NCOR2;;nc|ENSG00000196498|Q9Y618-5|NCOR2 6.9080268541971845 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5765 30.474 139.0 329470.0 25 0 17546.0 -1 QQIQKVVM 8 96 495.2754873136586 988.5364216941172 2 495.2747070193291 MULTI CID FTMS 0 0 0 5755 183416.609375 1.0 0 0.0 10 Oxidation (M) _QQIQKVVM(Oxidation (M))_ ENSG00000161960|ENST00000293831|EIF4A1;ENST00000550578.1_1_12:53547103-53547616:+|nuORF;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1 19.438996006549623 0.6237395211498085 2 V{M(Oxidation (M))|F} 2 -1 20.969 0.0 0.0 2.1212 0.0 0.0 724.4217804361078 0.0 724.4217804361078 0.0 3.4730926810043456 0.0 0.0 0 0.0 0.0 0.0 0.0 V{M(Oxidation (M))|F} 2.1212 + + 143 + 1 1.848 41055.8 1.0 2412 3351 5755 DOHH2_400M_050219_2,5765 DOHH2_400M_050219_2,5765,QQIQKVVM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5766 30.482 475.0 227000.0 25 0 33409.0 + 6186 DTDYRSMEY 9 133 590.2348597577422 1178.4551665822844 2 590.2346069216728 MULTI CID FTMS 0 0 0 5755 136580.90625 0.192192639195999 3 -0.3308792114257812 11 Unmodified _DTDYRSMEY_ ENSG00000004534|ENST00000266022|RBM6;nc|ENSG00000004534|P78332-3|RBM6 59.36838082759317 0.0264317782606298 2 {[ES]|[DT]|[{I|L}C]}DYRMSEY 9 2 + 42.021 0.0 0.0 3.5658 3.5658 72.637 0.0 0.0 0.0 4.232712163289278 28.801265223785347 4.232712163289278 4.771212547196612 0 1.8182503180159344 0.0 0.7059771852360797 0.0 {[ES]|[DT]|[{I|L}C]}DYRMSEY;{[ES]|[DT]|[{I|L}C]}DYRSMEY;{[ES]|[DT]|[{I|L}C]}D[VG]YMSEY;{[ES]|[DT]|[{I|L}C]}DY{[YD]|[{M(Oxidation (M))|F}M]}[QP]Y;{[ES]|[DT]|[{I|L}C]}DY[C(Carbamidomethyl (C))K]{[QS]|[NT]}Y;{[ES]|[DT]|[{I|L}C]}D[VG]YSMEY;{[ES]|[DT]|[{I|L}C]}DYRMY{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}D[HC][{I|L}P]SEY;{[MG]|[TS]}{[YD]|[{M(Oxidation (M))|F}M]}{[TV]|[{I|L}S]}DSEY;{[ES]|[DT]|[{I|L}C]}D[VG]YMY{[ES]|[DT]|[{I|L}C]} 3.5658;3.1609;3.1329;3.06;2.8868;2.728;2.0613;2.0035;1.779;1.6284 -;+;-;-;-;-;-;-;-;- + 785 1 1.848 84720.3 1.0 2413 3351 5755 DOHH2_400M_050219_2,5766 DOHH2_400M_050219_2,5766,DTDYRSMEY True True DTDYRSMEY 30.482166 590.234606921673 7942995.5 5755.0 ENSG00000004534|ENST00000266022|RBM6;;nc|ENSG00000004534|P78332-3|RBM6 8.62401787439982 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5767 30.487 261.0 312240.0 25 0 29283.0 + 8727 EVLQRGEAL 9 106 507.7833210782172 1013.5520892232344 2 507.7830688357353 MULTI CID FTMS 0 0 0 5755 139072.078125 0.4338468166074482 -1 0.0796375274658203 12 Unmodified _EVLQRGEAL_ ENSG00000265808|ENST00000578049|SEC22B 49.93300154707207 0.0405168250806675 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}QWRA{I|L} 8 3 + 56.463 0.0 0.0 5.5708 5.5708 86.571 0.0 0.0 0.0 19.42803136799156 14.904630595263413 14.904630595263413 9.262137858390815 0 0.9802046884880936 2.0 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}{I|L}QWRA{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[AG]WRA{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}E{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]{NN|[MP]|[D{I|L}]|[EV]}RA{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}EA[RN]A{I|L};{[DA]|[EG]}RQ{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}E{I|L}{[NV]|[RG]}[QA];{[DA]|[EG]}RAG{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}EA[RV][QA];[Q{I|L}]VEW[VG]A{I|L} 5.5708;4.6569;3.1443;2.9989;2.4139;1.8929;1.8168;1.7696;1.0863;0.49496 -;-;-;-;-;-;-;-;-;- 461 + 1 1.848 70138.4 1.0 2414 3351 5755 DOHH2_400M_050219_2,5767 DOHH2_400M_050219_2,5767,EVLQRGEAL True True EVLQRGEAL 30.486993 507.783068835735 1402567.25 5755.0 ENSG00000265808|ENST00000578049|SEC22B 3.6071728070576983 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5768 30.498 570.0 209830.0 25 0 16491.0 6216 DTLVQEKLK 9 142 537.3141288118363 1072.6137046904726 2 538.3171264529228 MULTI CID FTMS 0 0 0 5755 102220.609375 0.8896499837664269 -1 0.0796375274658203 13 Unmodified _DTLVQEKLK_ ENST00000441609.1_1_6:162989483-162989972:+|nuORF 14.838274106304384 0.4350285940865338 2 K 1 8 18.372 0.0 0.0 1.7128 0.0 0.0 926.5078677537524 0.0 926.5078677537524 0.0 3.767711195242765 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 + K 1.7128 + + 282 + 1 1.848 93628.2 1.0 2415 3351 5755 DOHH2_400M_050219_2,5768 DOHH2_400M_050219_2,5768,DTLVQEKLK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5769 30.512 800.0 148710.0 25 0 10893.0 + 14591 IIDGKTLKY 9 135 525.8135848738568 1049.6126168145136 2 525.8143188357353 MULTI CID FTMS 0 0 0 5755 96772.921875 0.592225949531581 1 -0.101165771484375 14 Unmodified _IIDGKTLKY_ ENSG00000124406|ENST00000381668|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1 26.268140514670165 0.1969607489560049 2 {I|L}{I|L}D 3 6 44.922 0.0 0.0 4.2798 0.0 0.0 0.0 705.3907272289871 705.3907272289871 23.750612633917 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}{I|L}D 4.2798 + + 219 + 1 1.848 93740.8 0.4699999988079071 2416 3351 5755 DOHH2_400M_050219_2,5769 DOHH2_400M_050219_2,5769,IIDGKTLKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5770 30.524 697.0 123130.0 25 0 9392.9 + 5676 DPGTPCDQHHY 11 114 423.8381492055965 1268.4926182169893 3 423.8377258181572 MULTI CID FTMS 0 0 0 5755 93028.390625 1.0 0 0.0 15 Unmodified _DPGTPCDQHHY_ REV__ENST00000602775.5_1_5:139929747-139930248:-|nuORF 6.2057823575117 0.8458686499021061 2 HY 2 -1 17.959 0.0 0.0 1.4158 0.0 0.0 950.3596053769488 0.0 950.3596053769488 0.0 5.94627864208428 0.0 0.0 0 0.0 0.0 0.0 0.0 HY 1.4158 + + 88 + 1 1.848 75094.6 1.0 2417 3351 5755 DOHH2_400M_050219_2,5770 DOHH2_400M_050219_2,5770,DPGTPCDQHHY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5771 30.527 54.0 793200.0 25 0 124630.0 -1 0 71 459.2801292467109 458.2728527801109 1 459.2805663943291 MULTI CID FTMS 0 0 0 5755 792405.0625 0.0116925709045718 15 -1.0631599426269531 16 2 {[QN]|[E{I|L}]|[KN]}VV 4 -1 + 26.355 0.0 0.0 5.751 5.751 90.931 0.0 0.0 0.0 13.25618597076895 15.096069897241922 13.25618597076895 26.35512976221092 0 0.0 2.0 0.2887254899964357 0.0 {[QN]|[E{I|L}]|[KN]}VV 5.751 - 17 1 1.848 42013.9 1.0 2418 3351 5755 DOHH2_400M_050219_2,5771 DOHH2_400M_050219_2,5771, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5772 30.532 321.0 256910.0 25 0 25868.0 8736 EVNGLISMY 9 121 513.2539988967101 0 513.2545043826103 PEAK CID FTMS 0 0 0 5755 141156.65625 1.0 0 0.0 17 Unmodified _EVNGLISMY_ ENSG00000108883|ENST00000426333|EFTUD2;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 16.942295170755138 0.2326366549411506 2 DPA 3 9 14.693 0.0 0.0 1.4341 0.0 0.0 246.1323741588513 492.20603357486567 738.338407733717 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 DPA 1.4341 - 13 + 1 1.848 68386.1 1.0 2419 3351 5755 DOHH2_400M_050219_2,5772 DOHH2_400M_050219_2,5772,EVNGLISMY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5774 30.537 10.0 5518300.0 25 0 834420.0 + 9481 FLDESRSTQY 10 55 623.2910002051295 1244.567447477059 2 623.2912475466728 MULTI CID FTMS 0 0 0 5773 4973457.5 0.6091137346982366 1 -0.1160469055175781 1 Unmodified _FLDESRSTQY_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 45.739877483867886 0.1051543674217965 2 ED{I|L}E 4 9 41.186 0.0 0.0 3.3092 0.0 0.0 740.3463873788721 0.0 740.3463873788721 0.0 17.47425010840047 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 ED{I|L}E 3.3092 - 62 1 1.848 47307.5 1.0 2420 3352 5773 DOHH2_400M_050219_2,5774 DOHH2_400M_050219_2,5774,FLDESRSTQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5775 30.539 76.0 707560.0 25 0 64571.0 + 26919 PDPVPVNEQF 10 82 381.189137552203 1140.545583256809 3 381.1888610720634 MULTI CID FTMS 0 0 0 5773 541392.625 0.4678122996389829 1 -0.1160469055175781 2 Unmodified _PDPVPVNEQF_ REV__ENST00000453597.7_1_9:34997259-34997418:+|nuORF 9.38312468134398 0.6832340498775793 2 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 1.2804 0.0 0.0 975.466144025167 0.0 975.466144025167 0.0 -14.323806533759438 -14.323806533759438 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2804 + + 49 + 1 1.848 48805.3 1.0 2421 3352 5773 DOHH2_400M_050219_2,5775 DOHH2_400M_050219_2,5775,PDPVPVNEQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5776 30.541 79.0 841050.0 25 0 67884.0 + 7124 EEMPATKGGF 10 74 533.7475488735184 1065.4805448138368 2 533.7473022341728 MULTI CID FTMS 0 0 0 5773 616856.875 0.2962505228059873 -1 0.101165771484375 3 Unmodified _EEMPATKGGF_ ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153 36.506200033944 0.1944608063770638 2 EEMPAT 6 4 57.906 0.0 0.0 5.4347 0.0 0.0 0.0 404.1937051126091 404.1937051126091 29.07824964939472 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.75 0.0 + EEMPAT 5.4347 + + 118 + 1 1.848 58140.4 1.0 2422 3352 5773 DOHH2_400M_050219_2,5776 DOHH2_400M_050219_2,5776,EEMPATKGGF False True EEMPATKGGF 30.540649 533.747302234173 18943876.0 5773.0 nc|ENSG00000124789|P49790-2|NUP153;;ENSG00000124789|ENST00000262077|NUP153;;nc|ENSG00000124789|P49790-3|NUP153 6.879350821177165 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5777 30.543 98.0 630670.0 25 0 73980.0 + -1 ICFNTDEAAFY 11 89 675.7895440923611 1349.564535251522 2 675.7892333865166 MULTI CID FTMS 0 0 0 5773 585839.6875 0.6021097852206476 -1 0.101165771484375 4 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FNTDEAAFY_ REV__ENSG00000163746|ENST00000696113|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7-3|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7|PLSCR2 17.11289562659939 0.6791789249425932 2 {[QN]|[E{I|L}]|[KN]}NHSQQNA{M(Oxidation (M))|F}Y 11 -1 + 80.936 0.0 0.0 5.9972 5.9972 76.746 0.0 0.0 0.0 8.240825978597329 9.044938854093616 8.240825978597329 0.6690156004425774 0 1.0612431371158737 0.0 1.6506888547474032 2.5356668758921828 {[QN]|[E{I|L}]|[KN]}NHSQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y;[HQ][NS]NQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}NHSQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}NHSQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}NHS[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]N[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]GGQQNA{M(Oxidation (M))|F}Y 5.9972;5.9476;5.3866;5.3208;5.3208;5.3208;5.2712;5.2712;5.2712;5.2712 -;-;-;-;-;-;-;-;-;- 1678 1 1.848 52477.2 1.0 2423 3352 5773 DOHH2_400M_050219_2,5777 DOHH2_400M_050219_2,5777,ICFNTDEAAFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5778 30.546 186.0 552120.0 25 0 93476.0 + 34219 SLPKKVSL 8 97 436.2841869220852 870.5538209109703 2 436.2838928103447 MULTI CID FTMS 0 0 0 5773 413944.96875 1.0 0 0.0 5 Unmodified _SLPKKVSL_ ENSG00000111247|ENST00000352618|RAD51AP1;nc|ENSG00000111247|Q96B01|RAD51AP1 22.736283301280096 0.5659792798204337 2 {[TV]|[{I|L}S]}PK 4 4 38.06 0.0 0.0 4.3719 0.0 0.0 0.0 442.26701620215886 442.26701620215886 9.599009323677096 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[TV]|[{I|L}S]}PK 4.3719 + + 88 + 1 1.848 83520.2 1.0 2424 3352 5773 DOHH2_400M_050219_2,5778 DOHH2_400M_050219_2,5778,SLPKKVSL False True SLPKKVSL 30.546363 436.283892810345 1822148.875 5773.0 nc|ENSG00000111247|Q96B01|RAD51AP1;;ENSG00000111247|ENST00000352618|RAD51AP1 5.523990472157796 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5779 30.548 82.0 637770.0 25 0 83010.0 -1 0 101 530.252792656493 529.245516189893 1 530.2543212771416 MULTI CID FTMS 0 0 0 5773 384810.96875 1.0 0 0.0 6 2 {I|L} 1 -1 13.099 0.0 0.0 2.475 0.0 0.0 398.1505587697743 0.0 398.1505587697743 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.475 - 24 + 1 1.848 47659.9 1.0 2425 3352 5773 DOHH2_400M_050219_2,5779 DOHH2_400M_050219_2,5779, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5780 30.551 143.0 485200.0 25 0 48141.0 + 19158 LEDGRTLSDY 10 90 584.7772489169615 1167.539944900723 2 584.7776367068291 MULTI CID FTMS 0 0 0 5773 324713.375 1.0 0 0.0 7 Unmodified _LEDGRTLSDY_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000597285.1_1_19:7730614-7730836:+|nuORF 59.05245873256422 0.0390717477387156 2 {I|L}ED 3 7 58.06 0.0 0.0 4.9728 0.0 0.0 0.0 807.3635736798328 807.3635736798328 12.552532784198895 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7614393726401688 0.0 + {I|L}ED 4.9728 + + 112 + 1 1.848 56039.0 1.0 2426 3352 5773 DOHH2_400M_050219_2,5780 DOHH2_400M_050219_2,5780,LEDGRTLSDY True True LEDGRTLSDY 30.551118 584.777636706829 1840554.125 5773.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;;ENST00000597285.1_1_19:7730614-7730836:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC;;ENST00000392399.3_1_2:137087013-137087097:-|nuORF 7.608249505360921 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5781 30.556 254.0 353240.0 25 0 36099.0 -1 LNQKRMEDLQ 10 100 645.825641377209 1289.6367298212178 2 645.8257934451103 MULTI CID FTMS 0 0 0 5773 300176.21875 1.0 0 0.0 8 Oxidation (M) _LNQKRM(Oxidation (M))EDLQ_ ENST00000504849.5_1_4:39329283-39344012:-|nuORF 57.72198328787511 0.0425618229276495 2 {[QV]|[N{I|L}]|[RA]|[KV]}[H{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DG{M(Oxidation (M))|F}{I|L}Q 11 -1 + 64.786 0.0 0.0 5.0236 5.0236 88.169 0.0 0.0 0.0 7.644554200709422 19.33584727812918 7.644554200709422 27.11249690339386 0 1.424742501084005 1.2218487496163564 0.0 1.110924374808178 {[QV]|[N{I|L}]|[RA]|[KV]}[H{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DG{M(Oxidation (M))|F}{I|L}Q;{I|L}NEA{[MS]|[{M(Oxidation (M))|F}A]}{I|L}V{I|L}[WD];[KA]{[YD]|[{M(Oxidation (M))|F}M]}[WY]G{M(Oxidation (M))|F}{I|L}Q;{[CA]|SS}{I|L}{[RE]|[WV]}WV{I|L}[WD];{[CA]|SS}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N[{I|L}V]{I|L}[WD] 5.0236;2.9212;2.4727;0.51637;0.16619 -;-;-;-;- 196 1 1.848 70724.6 1.0 2427 3352 5773 DOHH2_400M_050219_2,5781 DOHH2_400M_050219_2,5781,LNQKRMEDLQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5782 30.56 217.0 235770.0 25 0 20195.0 + 323 AEAEKTFSY 9 96 523.2452057241128 1044.4758585150255 2 523.2450439333916 MULTI CID FTMS 0 0 0 5773 294186.28125 0.3441137695864016 2 -0.2297134399414062 9 Unmodified _AEAEKTFSY_ ENSG00000196655|ENST00000533632|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889505-118889751:+|nuORF;nc|ENSG00000196655|Q9Y296-2|TRAPPC4 27.628801355627647 0.1796483985696185 2 {[CP]|[EA]}KT{M(Oxidation (M))|F}SY{[CP]|[EA]} 9 4 + 30.864 0.0 0.0 2.9549 2.9549 68.911 0.0 0.0 0.0 2.9597222334591144 5.642492736872601 2.9597222334591144 2.9597222334591144 0 0.5 0.0 0.0 0.0 {[CP]|[EA]}KT{M(Oxidation (M))|F}SY{[CP]|[EA]};{[CP]|[EA]}AE{[QS]|[NT]}T[VG][PG];[TA][VG]T{M(Oxidation (M))|F}SY{[CP]|[EA]};{[CP]|[EA]}[HM]{M(Oxidation (M))|F}T[VG][PG];[KG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}SY{[CP]|[EA]};[RD]E[C(Carbamidomethyl (C))R][VG][PG];{[CP]|[EA]}A[H{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[MT];{[SA]|[TG]}{[VA]|[{I|L}G]}T{M(Oxidation (M))|F}SY{[CP]|[EA]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[{M(Oxidation (M))|F}D]|MM}[WR]Y 2.9549;2.6716;2.1593;1.7656;0.82932;0.60329;0.51233;0.44178;0.067331 -;-;-;-;-;-;-;-;- 173 1 1.848 47514.6 1.0 2428 3352 5773 DOHH2_400M_050219_2,5782 DOHH2_400M_050219_2,5782,AEAEKTFSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5783 30.565 278.0 249490.0 25 0 16394.0 + 25464 NEIESRCEEY 10 102 636.2636035051415 1270.512654077083 2 636.2638427615166 MULTI CID FTMS 0 0 0 5773 227307.890625 1.0 0 0.0 10 Unmodified _NEIESRCEEY_ ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135282676-135283553:+|nuORF 33.4449034751529 0.2267874087365337 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E 4 6 30.445 0.0 0.0 2.3963 0.0 0.0 0.0 782.2788729517032 782.2788729517032 10.144687573382424 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E 2.3963 + + 317 + 1 1.848 59333.6 1.0 2429 3352 5773 DOHH2_400M_050219_2,5783 DOHH2_400M_050219_2,5783,NEIESRCEEY False True NEIESRCEEY 30.565105 636.263842761517 620481.0 5773.0 ENST00000607647.5_1_7:135282676-135283553:+|nuORF;;ENSG00000155561|ENST00000285968|NUP205 3.7121697266896567 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5784 30.569 227.0 473250.0 25 0 39232.0 + 31771 RSEKMTLSY 9 122 557.7819924549377 0 557.7820312380791 PEAK CID FTMS 0 0 0 5773 194655.421875 1.0 0 0.0 11 Unmodified _RSEKMTLSY_ ENSG00000101935|ENST00000262844|AMMECR1;nc|ENSG00000101935|Q9Y4X0-3|AMMECR1;nc|ENSG00000101935|Q9Y4X0-4|AMMECR1 49.55428908609986 0.0328875595922215 2 TS{I|L}TMKW 7 7 43.047 0.0 0.0 3.8657 0.0 0.0 80.01175347656938 183.07769190006096 263.08944537663035 0.0 0.0 0.0 0.0 0 1.0 0.0 1.110924374808178 0.0 TS{I|L}TMKW 3.8657 - 1235 + 1 1.848 85843.9 1.0 2430 3352 5773 DOHH2_400M_050219_2,5784 DOHH2_400M_050219_2,5784,RSEKMTLSY True True RSEKMTLSY 30.569391 557.782031238079 1231747.0 5773.0 ENSG00000101935|ENST00000262844|AMMECR1;;nc|ENSG00000101935|Q9Y4X0-3|AMMECR1;;nc|ENSG00000101935|Q9Y4X0-4|AMMECR1 5.002569278081258 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5785 30.575 301.0 484950.0 25 0 55508.0 + -1 KVYNHLTMK 9 126 575.308535374137 1148.602517815074 2 575.3079711794853 MULTI CID FTMS 0 0 0 5773 170344.5625 0.2598444392029835 -1 0.101165771484375 12 Oxidation (M) _KVYNHLTM(Oxidation (M))K_ REV__ENSG00000006459|ENST00000397560|KDM7A;REV__nc|ENSG00000006459|Q6ZMT4-2|KDM7A 21.53697664764585 0.2571576504437394 2 [KT]T[DV][{I|L}P]T{M(Oxidation (M))|F}K 10 -1 + 55.78 0.0 0.0 4.8563 4.8563 76.646 0.0 0.0 0.0 0.7918124604762511 37.631492287727454 0.7918124604762511 3.979400086720375 0 1.774227503252014 0.0 1.1382104921644451 0.0 [KT]T[DV][{I|L}P]T{M(Oxidation (M))|F}K;[KT][DV]T[{I|L}P]T{M(Oxidation (M))|F}K;[KT][VS]E[{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[DV][{I|L}P]TT{[CA]|SS};{[WT]|[RM]}KE[{I|L}P]T{M(Oxidation (M))|F}K;{[MG]|[TS]}VKE[{I|L}P]T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PA]T[{I|L}P]T{M(Oxidation (M))|F}K;[KT][DV]T[{I|L}P]TT{[CA]|SS};[KT]T[{I|L}P][DV]T{M(Oxidation (M))|F}K;[KT][VS]E[{I|L}P]TT{[CA]|SS} 4.8563;4.5099;4.4409;3.9706;3.9662;3.7991;3.7247;3.6242;3.6232;3.5553 -;-;-;-;-;-;-;-;-;- 1328 1 1.848 112097.3 1.0 2431 3352 5773 DOHH2_400M_050219_2,5785 DOHH2_400M_050219_2,5785,KVYNHLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5786 30.579 200.0 539420.0 25 0 100730.0 + 16650 KELEEIEKY 9 114 394.2076065717759 0 394.2072936892509 PEAK CID FTMS 0 0 0 5773 129283.3828125 0.2643178934703377 -1 0.101165771484375 13 Unmodified _KELEEIEKY_ REV__ENSG00000244754|ENST00000267068|N4BP2L2;REV__nc|ENSG00000244754|Q92802-2|N4BP2L2 36.506200033944 0.0788933506710822 2 YEE{I|L} 4 -1 18.646 0.0 0.0 2.3711 0.0 0.0 124.0739944568846 125.07239710025624 249.14639155714084 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 YEE{I|L} 2.3711 - 55 + 1 1.848 88092.9 1.0 2432 3352 5773 DOHH2_400M_050219_2,5786 DOHH2_400M_050219_2,5786,KELEEIEKY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5787 30.593 800.0 110510.0 25 0 9470.4 + 16647 KEKPPEEPTTW 11 121 671.3387563933318 1340.6629598534637 2 671.3366577029228 MULTI CID FTMS 0 0 0 5773 136338.328125 1.0 0 0.0 14 Unmodified _KEKPPEEPTTW_ ENSG00000157954|ENST00000288828|WIPI2;ENST00000466014.5_1_7:5232953-5270575:+|nuORF;nc|ENSG00000157954|Q9Y4P8-2|WIPI2;nc|ENSG00000157954|Q9Y4P8-3|WIPI2;nc|ENSG00000157954|Q9Y4P8-4|WIPI2;nc|ENSG00000157954|Q9Y4P8-5|WIPI2;nc|ENSG00000157954|Q9Y4P8-6|WIPI2 46.0223103267499 0.1396584557920269 2 M[TP]TW 5 7 34.983 0.0 0.0 2.6094 0.0 0.0 706.367868156001 0.0 706.367868156001 0.0 18.55602230376516 0.0 0.0 0 1.5 0.0 0.5774509799928715 0.0 M[TP]TW 2.6094 - 320 + 1 1.848 69122.5 0.6899999976158142 2433 3352 5773 DOHH2_400M_050219_2,5787 DOHH2_400M_050219_2,5787,KEKPPEEPTTW False True KEKPPEEPTTW 30.592555 671.336657702923 930425.75 5773.0 nc|ENSG00000157954|Q9Y4P8-5|WIPI2;;nc|ENSG00000157954|Q9Y4P8-3|WIPI2;;ENST00000466014.5_1_7:5232953-5270575:+|nuORF;;nc|ENSG00000157954|Q9Y4P8-2|WIPI2;;nc|ENSG00000157954|Q9Y4P8-4|WIPI2;;ENSG00000157954|ENST00000288828|WIPI2;;nc|ENSG00000157954|Q9Y4P8-6|WIPI2 7.318668365478516 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5788 30.606 800.0 349080.0 25 0 24396.0 + 17246 EELKELKEY 9 177 590.3741351771561 0 590.8090698122978 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _KLLTRELLPP_ ENSG00000172775|ENST00000309137|PSME3IP1 5.296884461304476 0.3961065659209837 2 E{I|L}KE{I|L}KE 7 7 33.849 0.0 0.0 2.8716 0.0 0.0 128.17514860777425 178.05132471256096 306.22647332033523 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6549471895720984 0.0 E{I|L}KE{I|L}KE 2.8716 - 696 + 1 1.848 204639.0 0.5600000023841858 2434 3352 5773 DOHH2_400M_050219_2,5788 DOHH2_400M_050219_2,5788,KLLTRELLPP False False EELKELKEY 30.606386 590.809069812298 1712450.0 5773.0 ENSG00000172775|ENST00000309137|PSME3IP1 6.783174514770508 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5789 30.611 176.0 510820.0 25 0 32067.0 + 15058 IMDDPAGNSY 10 119 541.7259754363075 1081.437397939415 2 541.7263671755791 MULTI CID FTMS 0 0 0 5773 382655.03125 0.7569723901091429 -1 0.101165771484375 16 Unmodified _IMDDPAGNSY_ ENSG00000109917|ENST00000227322|ZPR1 62.57269311338072 0.0298375429882549 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DDPAGNSY 10 0 + 41.565 0.0 0.0 3.8435 3.8435 72.281 0.0 0.0 0.0 11.988474775526186 9.699915470362017 9.699915470362017 3.52182518111362 0 1.274227503252014 1.6989700043360187 0.0 0.5 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DDPAGNSY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DDPQNSY;[HM]NGA{I|L}[CS]SY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DDPQGGSY;[DP]D{M(Oxidation (M))|F}PAGNSY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DDPAGGGSY;[HM]NQ{I|L}[CS]SY;[PA]GNS{[ES]|[DT]|[{I|L}C]}GNSY;[DP]D{M(Oxidation (M))|F}PQNSY;[HM]NGAP[HD]G{M(Oxidation (M))|F} 3.8435;3.5178;2.7349;2.6663;2.566;2.5337;2.4092;2.3082;2.2404;2.196 +;-;-;-;-;-;-;-;-;- + 672 1 1.848 72704.6 1.0 2435 3352 5773 DOHH2_400M_050219_2,5789 DOHH2_400M_050219_2,5789,IMDDPAGNSY True True IMDDPAGNSY 30.610984 541.726367175579 3202617.25 5773.0 ENSG00000109917|ENST00000227322|ZPR1 6.646768728892009 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5790 30.625 800.0 168330.0 25 0 21912.0 -1 0 131 649.364710219511 648.357433752911 1 649.3648559451103 MULTI CID FTMS 0 0 0 5773 154732.59375 0.5081517134859568 -7 0.5846004486083984 17 2 Y 1 -1 9.7539 0.0 0.0 1.5044 0.0 0.0 467.28245008767504 0.0 467.28245008767504 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5044 - 39 + 1 1.848 105777.9 0.6600000262260437 2436 3352 5773 DOHH2_400M_050219_2,5790 DOHH2_400M_050219_2,5790, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5791 30.639 800.0 149220.0 25 0 17283.0 -1 0 101 893.8828377064514 1785.7511224797026 2 894.3853027224541 MULTI CID FTMS 0 0 0 5773 153007.640625 1.0 0 0.0 18 2 {M(Oxidation (M))|F}AQNGAA[HD]{M(Oxidation (M))|F}Y 11 -1 59.22 0.0 0.0 3.3163 0.0 0.0 546.2286101024489 0.0 546.2286101024489 0.0 41.93050853278832 0.0 0.0 0 0.0 0.0 0.0 1.6549471895720984 {M(Oxidation (M))|F}AQNGAA[HD]{M(Oxidation (M))|F}Y 3.3163 - 6421 + 1 1.848 85831.9 0.5899999737739563 2437 3352 5773 DOHH2_400M_050219_2,5791 DOHH2_400M_050219_2,5791, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5792 30.649 571.0 217950.0 25 0 14976.0 -1 VADKVHLMY 9 171 364.5233412022469 1090.5481942069407 3 364.8777038455009 MULTI CID FTMS 0 0 0 5773 21185.009765625 0.3197434170156509 -1 0.101165771484375 19 Oxidation (M) _VADKVHLM(Oxidation (M))Y_ ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF 12.240655878213236 0.5053430591993562 2 [H{I|L}][DV]KGPYY 9 -1 + 20.017 0.0 0.0 1.8355 1.8355 63.755 0.0 0.0 0.0 0.2287874528033739 1.478174818886373 0.2287874528033739 0.2287874528033739 0 0.242992819099939 0.6777807052660807 0.5 0.0 [H{I|L}][DV]KGPYY;{[VA]|[{I|L}G]}[WP]PVPYY;{[VA]|[{I|L}G]}[WP]P{I|L}{M(Oxidation (M))|F}VY;[H{I|L}][DV]KA{M(Oxidation (M))|F}VY;[H{I|L}][WR]GPYY;[H{I|L}][WR]A{M(Oxidation (M))|F}VY;YYTAK[W{I|L}]{M(Oxidation (M))|F};[H{I|L}][DV]K{M(Oxidation (M))|F}AVY;{[DS]|[MA]|[CV]|TT}[YV]KGPYY;{[QD]|[EN]|[WG]|[KD]|[RS]}[RD]VKTDD 1.8355;1.8146;1.7;1.2625;1.0591;0.94449;0.77622;0.71042;0.53514;0.49484 -;-;-;-;-;-;-;-;-;- 259 1 1.848 106757.6 1.0 2438 3352 5773 DOHH2_400M_050219_2,5792 DOHH2_400M_050219_2,5792,VADKVHLMY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5794 30.654 100.0 530970.0 25 0 39178.0 + 26438 NTDSPLRY 8 85 483.2381113576644 964.4616697821288 2 483.2380248904228 MULTI CID FTMS 0 0 0 5793 291718.0 0.0081935046509945 10 -0.6475677490234375 1 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 37.97399986684836 0.2681860861828418 2 {[QS]|[NT]}DSP{I|L}RY 8 0 + 52.401 0.0 0.0 5.4332 5.4332 90.479 0.0 0.0 0.0 38.90600959017256 11.375175252488248 11.375175252488248 52.40085961185265 0 0.3807196863200844 2.0 0.0 0.0 + + {[QS]|[NT]}DSP{I|L}RY 5.4332 + + 55 + 1 1.84 47112.7 1.0 2439 3353 5793 DOHH2_400M_050219_2,5794 DOHH2_400M_050219_2,5794,NTDSPLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5795 30.656 19.0 3227500.0 25 0 484580.0 + 8936 FAMNDESVFY 10 68 611.7593452268318 1221.5041375204637 2 611.7599365115166 MULTI CID FTMS 0 0 0 5793 3147952.0 1.0 0 0.0 2 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 19.256988751693697 0.5244284437930726 2 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 75.411 0.0 0.0 6.1736 6.1736 86.888 0.0 0.0 0.0 7.269987279362624 68.42145952513228 7.269987279362624 9.164539485499247 0 1.0 0.0 0.2742275032520141 0.805462187404089 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;[HD][TA]{[{M(Oxidation (M))|F}H]|[RQ]}NA{M(Oxidation (M))|F}Y 6.1736;5.4234;5.4234;5.4234;4.676;4.676;4.676;3.5809 -;-;-;-;-;-;-;- 242 1 1.84 51349.7 1.0 2440 3353 5793 DOHH2_400M_050219_2,5795 DOHH2_400M_050219_2,5795,FAMNDESVFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5796 30.657 49.0 1083700.0 25 0 134810.0 + 37948 TMEGGTLKY 9 70 500.2447006930568 998.4748484529136 2 500.2450134158134 MULTI CID FTMS 0 0 0 5793 1056353.25 1.0 0 0.0 3 Unmodified _TMEGGTLKY_ ENSG00000197943|ENST00000564138|PLCG2;ENST00000567980.5_1_16:81819579-81955027:+|nuORF 24.020572477871973 0.2255576514309169 2 [MT]E{[QS]|[NT]}{I|L}KY 8 2 + 49.13 0.0 0.0 4.9205 4.9205 55.264 0.0 0.0 0.0 31.8943306386236 9.832881222565248 9.832881222565248 0.0 0 0.4247425010840047 1.6989700043360187 0.4247425010840047 0.0 [MT]E{[QS]|[NT]}{I|L}KY;[MT]ER[TA]KY;[MT]E[VG][TA]KY;{[{M(Oxidation (M))|F}C]|[YS]}YY{I|L}KY;[VG][TA]T[YR][MT];[VG][TA]E[YK][MT];{[{M(Oxidation (M))|F}C]|[YS]}[YK]{I|L}YY;{[QS]|[NT]}E{I|L}[YK][MT] 4.9205;4.9205;3.9928;1.4247;1.2884;1.2629;0.39508;0.23208 -;-;-;-;-;-;-;- 97 + 1 1.84 47089.1 1.0 2441 3353 5793 DOHH2_400M_050219_2,5796 DOHH2_400M_050219_2,5796,TMEGGTLKY False True TMEGGTLKY 30.656827 500.245013415813 4169372.0 5793.0 ENST00000567980.5_1_16:81819579-81955027:+|nuORF;;ENSG00000197943|ENST00000564138|PLCG2 5.442384084065755 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5797 30.659 79.0 1531900.0 25 0 414600.0 + 7773 ELGARVRAL 9 81 492.8009917972458 0 492.8011047244072 PEAK CID FTMS 0 0 0 5793 861913.375 0.7470897032219422 -1 0.1160469055175781 4 Unmodified _ELGARVRAL_ ENSG00000167513|ENST00000301019|CDT1 43.85829265575387 0.0484669621479465 2 AGQ 3 8 18.927 0.0 0.0 1.9242 0.0 0.0 131.09724703234446 593.3557833307249 724.4530303630693 0.0 0.0 0.0 0.0 0 0.5114393726401688 0.0 0.0 0.0 AGQ 1.9242 - 14 + 1 1.84 97726.4 1.0 2442 3353 5793 DOHH2_400M_050219_2,5797 DOHH2_400M_050219_2,5797,ELGARVRAL True True ELGARVRAL 30.658621 492.801104724407 6523603.5 5793.0 ENSG00000167513|ENST00000301019|CDT1 4.567300001780192 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5798 30.661 100.0 499800.0 25 0 60583.0 + 828 AETDFEKRDF 10 65 419.86318241415 0 419.8631469607353 PEAK CID FTMS 0 0 0 5793 419226.84375 1.0 0 0.0 5 Unmodified _AETDFEKRDF_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 20.580933911654288 0.2935917702031351 2 EK 2 8 11.326 0.0 0.0 1.352 0.0 0.0 144.36551170154365 433.1854342096313 577.550945911175 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 + EK 1.352 + + 42 + 1 1.84 45269.4 1.0 2443 3353 5793 DOHH2_400M_050219_2,5798 DOHH2_400M_050219_2,5798,AETDFEKRDF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5799 30.666 312.0 379350.0 25 0 34386.0 + -1 DDPLCCKMEEY 11 112 730.2811817429723 1458.5478105527443 2 730.2818481326103 MULTI CID FTMS 0 0 0 5793 288006.75 1.0 0 0.0 6 2 Carbamidomethyl (C) _DDPLC(Carbamidomethyl (C))C(Carbamidomethyl (C))KMEEY_ REV__ENSG00000041515|ENST00000457511|MYO16;REV__nc|ENSG00000041515|Q9Y6X6|MYO16 8.155526934196011 0.8366696279279818 2 [QA]HDEAQ 7 -1 49.206 0.0 0.0 3.3736 0.0 0.0 0.0 676.2084444635374 676.2084444635374 30.62214796746474 0.0 0.0 0.0 0 1.924742501084005 0.0 0.6989700043360187 0.6549471895720985 [QA]HDEAQ 3.3736 - 219 + 1 1.84 86027.4 1.0 2444 3353 5793 DOHH2_400M_050219_2,5799 DOHH2_400M_050219_2,5799,DDPLCCKMEEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5800 30.67 184.0 417700.0 25 0 57227.0 + 6793 EEALQRVY 8 96 504.2610230435487 1006.5074931538974 2 504.2620422244072 MULTI CID FTMS 0 0 0 5793 270970.75 1.0 0 0.0 7 Unmodified _EEALQRVY_ REV__ENSG00000140968|ENST00000268638|IRF8 19.438996006549623 0.6237395211498085 2 EE{I|L}GAA[RV]Y 9 -1 + 47.101 0.0 0.0 4.6796 4.6796 75.617 0.0 0.0 0.0 33.605925060534574 3.4678748622465605 3.4678748622465605 3.6991128507179374 0 0.4247425010840047 2.0 0.0 0.0 EE{I|L}GAA[RV]Y;EE{I|L}G[KP][TA]Y;EE{I|L}[KP]G[TA]Y;EE{I|L}QA[RV]Y;EE{I|L}[KP][QT]Y;{[TV]|[{I|L}S]}[HV]AAG{I|L}[HC];EE{I|L}[MT]EKK;{[TV]|[{I|L}S]}[HV]AQ{I|L}[HC];[DP]{I|L}[RP]G{I|L}[HC];[DP][TP][KP]{I|L}[HC] 4.6796;4.3121;4.3121;4.036;3.6685;2.626;2.5752;1.9771;1.6805;0.81105 -;-;-;-;-;-;-;-;-;- 84 + 1 1.84 63598.3 1.0 2445 3353 5793 DOHH2_400M_050219_2,5800 DOHH2_400M_050219_2,5800,EEALQRVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5801 30.676 342.0 332120.0 25 0 13617.0 + 6870 EEEGDRVITY 10 152 605.784075320474 1209.553597707748 2 605.7827026247978 MULTI CID FTMS 0 0 0 5793 232257.578125 1.0 0 0.0 8 Unmodified _EEEGDRVITY_ ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A 41.34703777101937 0.1433426498679313 2 [QA]TRAED[VG]TY 11 8 + 43.165 0.0 0.0 3.5687 3.5687 66.904 0.0 0.0 0.0 6.584424522051698 15.687234438974436 6.584424522051698 0.2692501919536738 0 0.3807196863200844 0.0 0.5994850021680094 0.3054621874040891 [QA]TRAED[VG]TY;EEVVAED[VG]TY;EE[R{I|L}]ED[VG]TY;[QA]EKAED[VG]TY;EEE[R{I|L}]D[VG]TY;[QA]T{I|L}[QA][WE]TY;[QA]T{I|L}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}NEY;[QA]TRAEWWY;EEVVAEWWY;[QA]T[VG]AED[VG]TY 3.5687;3.5464;3.2517;3.1742;3.1283;3.0378;2.8453;2.6422;2.62;2.5615 -;-;-;-;-;-;-;-;-;- 2101 + 1 1.84 82447.9 1.0 2446 3353 5793 DOHH2_400M_050219_2,5801 DOHH2_400M_050219_2,5801,EEEGDRVITY False True EEEGDRVITY 30.676217 605.782702624798 2015922.25 5793.0 nc|ENSG00000139842|Q13619-2|CUL4A;;ENSG00000139842|ENST00000375440|CUL4A 5.642121473948161 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5802 30.682 345.0 300180.0 25 0 31062.0 + 30536 RELISDNQY 9 117 569.2804407440417 1136.5463285548833 2 569.2803222537041 MULTI CID FTMS 0 0 0 5793 198574.9375 1.0 0 0.0 9 Unmodified _RELISDNQY_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 53.40400417844725 0.0329064971918313 2 {[RE]|[WV]}{I|L}{I|L}SDNQY 9 0 + 69.324 0.0 0.0 6.0995 6.0995 87.7 0.0 0.0 0.0 3.2568864632742844 53.20468618756989 3.2568864632742844 9.208187539523747 0 0.7742275032520141 0.0 0.6694451763165201 0.805462187404089 + + {[RE]|[WV]}{I|L}{I|L}SDNQY;{[RE]|[WV]}{I|L}{I|L}SDGGQY;{[RE]|[WV]}{I|L}{I|L}SDN[AG]Y;GGKK{I|L}DDNQY;{[RE]|[WV]}{I|L}{I|L}SDGG[AG]Y;GGKK{I|L}DDGGQY;GGKK{I|L}DDN[AG]Y;GGP{I|L}{I|L}[{M(Oxidation (M))|F}E]NQY;[NP]{I|L}{I|L}[{M(Oxidation (M))|F}E]NQY;{[RE]|[WV]}[WP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QY 6.0995;5.2893;5.2893;5.2197;4.483;4.4133;4.4133;2.5459;2.0409;2.0158 +;-;-;-;-;-;-;-;-;- + 275 1 1.84 82416.9 1.0 2447 3353 5793 DOHH2_400M_050219_2,5802 DOHH2_400M_050219_2,5802,RELISDNQY True True RELISDNQY 30.682473 569.280322253704 1228991.25 5793.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 6.723574002583821 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5803 30.688 319.0 537900.0 25 0 50205.0 + 35257 SSFIGKVKS 9 119 476.7768777738322 951.5392026144644 2 476.7769653201103 MULTI CID FTMS 0 0 0 5793 181632.171875 0.0548979661654487 -2 0.2172126770019531 10 Unmodified _SSFIGKVKS_ REV__ENST00000335500.8_1_17:42474164-42474308:-|nuORF 39.94969957227396 0.0757326808254658 2 SS{M(Oxidation (M))|F}{I|L}SKVGK 9 -1 + 81.344 0.0 0.0 8.5487 8.5487 98.853 0.0 0.0 0.0 57.425202959626105 12.49204916223158 12.49204916223158 81.34398816300155 0 0.8664934734859663 1.5228787452803376 1.066901560044258 0.1989700043360188 SS{M(Oxidation (M))|F}{I|L}SKVGK 8.5487 - 263 + 1 1.84 134109.2 1.0 2448 3353 5793 DOHH2_400M_050219_2,5803 DOHH2_400M_050219_2,5803,SSFIGKVKS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5804 30.695 354.0 304280.0 25 0 14691.0 -1 AFPCGGGG 8 114 722.2911934275326 721.2839169609325 1 722.2944824099541 MULTI CID FTMS 0 0 0 5793 180906.21875 1.0 0 0.0 11 Carbamidomethyl (C) _AFPC(Carbamidomethyl (C))GGGG_ ENSG00000020633|ENST00000308873|RUNX3;nc|ENSG00000020633|Q13761-2|RUNX3 6.354104778181461 0.7857632046190106 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V{M(Oxidation (M))|F}Y 5 -1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} + + 22.479 0.22879 0.077799 3.1166 3.1166 49.062 0.0 0.0 0.0 0.0 -2.1864278906452483 -2.1864278906452483 0.0 0 0.2302046884880938 0.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V{M(Oxidation (M))|F}Y 3.1166 - 119 + 1 1.84 82204.4 1.0 2449 3353 5793 DOHH2_400M_050219_2,5804 DOHH2_400M_050219_2,5804,AFPCGGGG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5805 30.702 411.0 249950.0 25 0 22318.0 + 34546 SPAVKRLL 8 138 442.2898088132685 882.5650646933369 2 442.2896301150322 MULTI CID FTMS 0 0 0 5793 154537.34375 1.0 0 0.0 12 Unmodified _SPAVKRLL_ ENSG00000113658|ENST00000545279|SMAD5;ENSG00000120693|ENST00000379826|SMAD9;ENSG00000170365|ENST00000302085|SMAD1;nc|ENSG00000120693|O15198-2|SMAD9 48.345845343767074 0.1470278396477103 2 SPAVK 5 3 66.797 0.0 0.0 7.5685 0.0 0.0 0.0 397.2576387994751 397.2576387994751 53.01152522447381 0.0 0.0 0.0 0 1.360924374808178 2.0 0.0 0.0 + SPAVK 7.5685 + + 301 + 1 1.84 82188.3 1.0 2450 3353 5793 DOHH2_400M_050219_2,5805 DOHH2_400M_050219_2,5805,SPAVKRLL False True SPAVKRLL 30.701992 442.289630115032 455747.09375 5793.0 ENSG00000170365|ENST00000302085|SMAD1;;ENSG00000120693|ENST00000379826|SMAD9;;nc|ENSG00000120693|O15198-2|SMAD9;;ENSG00000113658|ENST00000545279|SMAD5 3.3476832707722983 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5806 30.706 235.0 229080.0 25 0 12167.0 + 8839 EYVRAKYY 8 108 364.5233412022469 1090.5481942069407 3 364.5231811404228 MULTI CID FTMS 0 0 0 5793 151481.375 1.0 0 0.0 13 Unmodified _EYVRAKYY_ REV__ENSG00000167210|ENST00000642948|LOXHD1;REV__nc|ENSG00000167210|Q8IVV2|LOXHD1 6.723162845929126 0.7835230281555235 2 {I|L}GPYY 5 -1 21.07 0.0 0.0 1.9321 0.0 0.0 479.2501393048844 0.0 479.2501393048844 0.0 6.465912507003608 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 {I|L}GPYY 1.9321 - 82 1 1.84 53132.6 1.0 2451 3353 5793 DOHH2_400M_050219_2,5806 DOHH2_400M_050219_2,5806,EYVRAKYY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5807 30.721 800.0 213840.0 25 0 11063.0 -1 NNLRESLMQF 10 168 634.3058612282942 1266.5971695233884 2 634.3030883669853 MULTI CID FTMS 0 0 0 5793 126887.484375 0.8383028514976996 -1 0.1160469055175781 14 Oxidation (M) _NNLRESLM(Oxidation (M))QF_ ENSG00000005007|ENST00000262803|UPF1;ENST00000600689.1_1_19:18974163-18976510:+|nuORF;nc|ENSG00000005007|Q92900|UPF1 39.94969957227396 0.1580982266129622 2 [AG]{I|L}KQEEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 11 -1 + 70.488 0.0 0.0 5.5652 5.5652 81.862 0.0 0.0 0.0 6.405439798790127 13.30971062290122 6.405439798790127 6.405439798790127 0 0.7302046884880937 1.3979400086720375 0.75 1.1936726795685342 [AG]{I|L}KQEEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQEEA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[AG]{I|L}K[AG]EEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQDDV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEEA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[Q{I|L}]K[AG]EEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}K[AG]EEA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[Q{I|L}]KQDDV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[VP]VGQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 5.5652;5.0595;4.8445;4.8445;4.4201;4.3359;4.3359;4.1262;3.9144;3.7573 -;-;-;-;-;-;-;-;-;- 3841 1 1.84 128263.2 0.7300000190734863 2452 3353 5793 DOHH2_400M_050219_2,5807 DOHH2_400M_050219_2,5807,NNLRESLMQF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5808 30.725 175.0 359450.0 25 0 22962.0 + 5279 DLAAREHVL 9 89 512.2830080782145 1022.551463223229 2 512.2845947146416 MULTI CID FTMS 0 0 0 5793 124094.6640625 0.4674111978232994 -1 0.1160469055175781 15 Unmodified _DLAAREHVL_ ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF 28.49450938151212 0.1686335738423394 2 HV{I|L} 3 6 32.619 0.0 0.0 3.19 0.0 0.0 655.3270741193375 0.0 655.3270741193375 0.0 21.199494890660464 0.0 0.0 0 0.6421590589602533 0.0 0.0 0.0 + HV{I|L} 3.19 + + 62 1 1.84 53592.7 1.0 2453 3353 5793 DOHH2_400M_050219_2,5808 DOHH2_400M_050219_2,5808,DLAAREHVL False True DLAAREHVL 30.724808 512.284594714642 1379674.25 5793.0 ENST00000477668.5_1_3:127323572-127337961:+|nuORF;;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2 6.351313591003418 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5809 30.729 248.0 348150.0 25 0 33222.0 + 25527 NEQDGVTYSY 10 116 588.2462067425895 1174.477860551979 2 588.2469970583916 MULTI CID FTMS 0 0 0 5793 115283.515625 0.2861473433614539 -1 0.1160469055175781 16 Unmodified _NEQDGVTYSY_ ENSG00000168528|ENST00000373709|SERINC2;ENST00000491976.1_1_1:31888748-31907043:+|nuORF;nc|ENSG00000168528|Q96SA4-2|SERINC2;nc|ENSG00000168528|Q96SA4-3|SERINC2;nc|ENSG00000168528|Q96SA4-4|SERINC2 69.10491478415734 0.0189654488676922 2 [R{M(Oxidation (M))|F}]Y[YN]YSY 8 7 + 27.898 0.0 0.0 2.3753 2.3753 68.581 0.0 0.0 0.0 1.4266750356873104 11.572836073545515 1.4266750356873104 3.1750330202995585 0 0.0 0.0 0.805462187404089 0.0 [R{M(Oxidation (M))|F}]Y[YN]YSY;[YT]SYQ[DN]{[RE]|[WV]};[R{M(Oxidation (M))|F}]YYYNSY;[R{M(Oxidation (M))|F}][DN][NP]YSY;{[{M(Oxidation (M))|F}C]|[YS]}TYQ[DN]{[RE]|[WV]};[AG]DQ[DG]V[DN]{[RE]|[WV]};[YT]EEWY{[RE]|[WV]};[R{M(Oxidation (M))|F}]YYYGGSY;[R{M(Oxidation (M))|F}][DN]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NSY;{[QD]|[EN]|[WG]|[KD]|[RS]}GA[DG]V[DN]{[RE]|[WV]} 2.3753;2.105;2.0122;1.5046;1.39;1.3642;1.3327;1.2236;1.1415;1.1317 -;-;-;-;-;-;-;-;-;- 589 + 1 1.84 67824.9 1.0 2454 3353 5793 DOHH2_400M_050219_2,5809 DOHH2_400M_050219_2,5809,NEQDGVTYSY True True NEQDGVTYSY 30.72944 588.246997058392 2977164.75 5793.0 nc|ENSG00000168528|Q96SA4-2|SERINC2;;ENSG00000168528|ENST00000373709|SERINC2;;ENST00000491976.1_1_1:31888748-31907043:+|nuORF;;nc|ENSG00000168528|Q96SA4-3|SERINC2;;nc|ENSG00000168528|Q96SA4-4|SERINC2 6.209601720174153 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5810 30.738 461.0 181850.0 25 0 13037.0 -1 0 113 543.301419468232 542.2941430016319 1 544.3002807497978 MULTI CID FTMS 0 0 0 -1 0 17 2 KKY 3 -1 21.069 0.0 0.0 3.8851 0.0 0.0 105.03057596237257 0.0 105.03057596237257 0.0 7.742948895896715 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 KKY 3.8851 - 29 + 1 1.84 70636.1 1.0 2455 3353 5793 DOHH2_400M_050219_2,5810 DOHH2_400M_050219_2,5810, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5811 30.751 800.0 112890.0 25 0 6692.3 + 827 AETDFEKRDF 10 119 629.2909368370541 1256.567320740908 2 629.2906371951103 MULTI CID FTMS 0 0 0 5793 186254.09375 1.0 0 0.0 18 Unmodified _AETDFEKRDF_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 29.43715596616401 0.3072975788498757 2 [TA][YT]KE{M(Oxidation (M))|F}DT 9 6 50.752 0.0 0.0 4.0389 0.0 0.0 0.0 197.05531494405847 197.05531494405847 30.57464055401036 0.0 0.0 0.0 0 1.0044321917401078 0.721246399047171 0.6382104921644451 0.0 [TA][YT]KE{M(Oxidation (M))|F}DT 4.0389 - 606 1 1.84 71281.0 0.8799999952316284 2456 3353 5793 DOHH2_400M_050219_2,5811 DOHH2_400M_050219_2,5811,AETDFEKRDF False True AETDFEKRDF 30.751456 629.29063719511 2643217.1875 5793.0 ENSG00000168259|ENST00000457167|DNAJC7;;nc|ENSG00000168259|Q99615-2|DNAJC7 6.7099277178446455 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5812 30.756 178.0 375720.0 25 0 40720.0 + 17048 KKVFNKIE 8 88 503.3059828354542 0 503.3058044314384 PEAK CID FTMS 0 0 0 5793 179308.421875 1.0 0 0.0 19 Unmodified _KKVFNKIE_ REV__ENSG00000117593|ENST00000649689|DARS2 11.640296217721598 0.5231213682848052 2 {I|L}GA 3 -1 11.427 0.0 0.0 1.1374 0.0 0.0 256.17298754415214 504.2581575983032 760.4311451424553 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}GA 1.1374 - 17 + 1 1.84 53770.3 1.0 2457 3353 5793 DOHH2_400M_050219_2,5812 DOHH2_400M_050219_2,5812,KKVFNKIE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5813 30.762 338.0 252490.0 25 0 11749.0 + 43320 WLFHHQPL 8 127 359.85860893549534 0 359.8585998415947 PEAK CID FTMS 0 0 0 5793 151844.375 1.0 0 0.0 20 Unmodified _WLFHHQPL_ REV__ENSG00000054690|ENST00000329153|PLEKHH1 5.230669730166228 0.5807325378471833 2 G 1 -1 4.6041 0.0 0.0 0.6415 0.0 0.0 301.5038867168907 356.1491070327757 657.6529937496664 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.6415 - 8 + 1 1.84 73692.7 1.0 2458 3353 5793 DOHH2_400M_050219_2,5813 DOHH2_400M_050219_2,5813,WLFHHQPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5815 30.767 3.2 11789000.0 25 0 1263200.0 8623 EVEEDEYKAFY 11 58 711.3076877055686 1420.600822477937 2 711.3090698122978 MULTI CID FTMS 0 0 0 5814 14428666.0 0.4763442982324375 1 -0.1063766479492187 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 2 [QA]HDEAGANQA{M(Oxidation (M))|F}Y 13 9 + 62.709 0.0 0.0 4.4143 4.4143 72.021 0.0 0.0 0.0 1.289820804554438 45.719617931083576 1.289820804554438 1.870866433571443 0 0.8935078169319297 0.0 0.0 0.8494850021680094 [QA]HDEAGANQA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAGAQNA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEQANQA{M(Oxidation (M))|F}Y;[QA]HDEAGAN[AG]A{M(Oxidation (M))|F}Y;[QA]HDEAGAGGQA{M(Oxidation (M))|F}Y;[QA]HDEQAQNA{M(Oxidation (M))|F}Y;[QA]HDEAQN[AG]A{M(Oxidation (M))|F}Y;[QA]HDEAQGGQA{M(Oxidation (M))|F}Y 4.4143;4.2826;4.2024;4.0707;3.9467;3.7756;3.7756;3.7348;3.6421;3.6421 -;-;-;-;-;-;-;-;-;- 634 1 1.841 35627.9 1.0 2459 3354 5814 DOHH2_400M_050219_2,5815 DOHH2_400M_050219_2,5815,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5816 30.768 39.0 1289100.0 25 0 159120.0 + 2543 ASEFPGAQHY 10 64 553.748995242515 1105.48343755183 2 553.7488891482353 MULTI CID FTMS 0 0 0 5814 1174024.25 0.8053040937618002 1 -0.1063766479492187 2 Unmodified _ASEFPGAQHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000566509.5_1_15:73052730-73067416:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-5|ADPGK 37.97399986684836 0.1789611706409123 2 {[SA]|[TG]}E{[WT]|[RM]}P{M(Oxidation (M))|F} 7 7 41.488 0.0 0.0 3.7529 0.0 0.0 0.0 284.0887263835592 284.0887263835592 29.498191371832192 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.424742501084005 0.3807196863200844 {[SA]|[TG]}E{[WT]|[RM]}P{M(Oxidation (M))|F} 3.7529 - 225 1 1.841 44025.6 1.0 2460 3354 5814 DOHH2_400M_050219_2,5816 DOHH2_400M_050219_2,5816,ASEFPGAQHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5817 30.77 67.0 706370.0 25 0 101450.0 + + -1 YNIQKESTL 9 79 548.2834825618476 1094.552412190495 2 548.2872802615166 MULTI CID FTMS 0 0 0 5814 745081.0625 0.517549217830305 20 -1.384748458862305 3 Carbamidomethyl (C) _NYLERC(Carbamidomethyl (C))LK_ ENST00000475545.1_1_17:10162090-10162312:+|nuORF;ENSG00000143947|ENST00000272317|RPS27A;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENSG00000170315|ENST00000302182|UBB;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENSG00000150991|ENST00000339647|UBC;ENST00000392399.3_1_2:137087013-137087097:-|nuORF 21.74664581756881 0.5868176546531598 2 YN{I|L}QR{[MG]|[TS]}T{I|L} 9 -1 + 70.883 0.0 0.0 6.476 6.476 88.421 0.0 0.0 0.0 56.27867968851152 17.22289807887175 17.22289807887175 9.208187539523742 0 1.3494850021680094 1.0969100130080565 1.0 0.0 YN{I|L}QR{[MG]|[TS]}T{I|L};YN{I|L}Q[VG]{[MG]|[TS]}T{I|L};YN{I|L}[AG]R{[MG]|[TS]}T{I|L};YGG{I|L}QR{[MG]|[TS]}T{I|L};YN{I|L}[WK]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};YGG{I|L}[WK]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QV]|[N{I|L}]|[RA]|[KV]}Y[WK]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{I|L}T]M{[TV]|[{I|L}S]}[WM][{I|L}T] 6.476;5.6347;5.6347;4.6325;4.0062;2.1578;2.067;0.26169 -;-;-;-;-;-;-;- 165 + 1 1.841 44282.2 1.0 2461 3354 5814 DOHH2_400M_050219_2,5817 DOHH2_400M_050219_2,5817,NYLERCLK False False YNIQKESTL 30.769577 548.287280261517 3846390.25 5814.0 ENST00000475545.1_1_17:10162090-10162312:+|nuORF;;ENSG00000143947|ENST00000272317|RPS27A;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC;;ENST00000392399.3_1_2:137087013-137087097:-|nuORF 7.6873501141866045 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5818 30.772 135.0 565190.0 25 0 70653.0 + 30471 REAGFQVKAY 10 73 584.8091673089677 1167.6037816847354 2 584.8090087771416 MULTI CID FTMS 0 0 0 5814 424655.28125 1.0 0 0.0 4 Unmodified _REAGFQVKAY_ chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-13|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-6|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 28.49450938151212 0.328477364964909 2 {[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}]QVKAY 9 2 + 56.933 0.0 0.0 4.8761 4.8761 82.401 0.0 0.0 0.0 4.682656907234488 43.66205699395486 4.682656907234488 9.166627941812171 0 1.3807196863200843 1.154901959985743 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}]QVKAY;[AG]V[W{M(Oxidation (M))|F}]QVKAY;{[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}][AG]VKAY;[AG]V[W{M(Oxidation (M))|F}][AG]VKAY;{[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}][KA]RAY;[KA][W{M(Oxidation (M))|F}]QV[VG]AY;{[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}]QG[K{I|L}]Y;[AG]V[W{M(Oxidation (M))|F}]QG[K{I|L}]Y 4.8761;4.091;4.0874;3.0068;2.8419;2.2041;1.8079;1.0228 -;-;-;-;-;-;-;- 103 1 1.841 62404.9 1.0 2462 3354 5814 DOHH2_400M_050219_2,5818 DOHH2_400M_050219_2,5818,REAGFQVKAY False True REAGFQVKAY 30.772321 584.809008777142 2195143.75 5814.0 nc|ENSG00000132185|Q7L513-3|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;nc|ENSG00000132185|Q7L513-6|FCRLA;;nc|ENSG00000132185|Q7L513-13|FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-8|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA 6.671643416086833 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5819 30.775 140.0 793020.0 25 0 78579.0 + 8532 ETEREYFNRY 10 101 469.5494548607226 1405.626535182368 3 469.5493652224541 MULTI CID FTMS 0 0 0 5814 342063.15625 1.0 0 0.0 5 Unmodified _ETEREYFNRY_ ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6 20.871137199558856 0.4973446006067743 2 ETE{[RE]|[WV]}Y{M(Oxidation (M))|F}NRY 10 0 + 45.778 0.0 0.0 3.2567 3.2567 72.733 0.0 0.0 0.0 16.532125137753436 5.639598797426437 5.639598797426437 5.639598797426437 0 0.0 0.0 0.4247425010840047 0.5994850021680094 + + ETE{[RE]|[WV]}Y{M(Oxidation (M))|F}NRY;ETE{[RE]|[WV]}Y{M(Oxidation (M))|F}Y[RN];ETE{[RE]|[WV]}YY{M(Oxidation (M))|F}[RN];ETE{[RE]|[WV]}Y{M(Oxidation (M))|F}GGRY;ETE{[RE]|[WV]}YTM[KG]Y;ET[R{M(Oxidation (M))|F}][C(Carbamidomethyl (C))N]{M(Oxidation (M))|F}NRY;[DP]{[RE]|[WV]}TY{[RE]|[WV]}E[DP];{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]EY{[RE]|[WV]}E[DP];ET[R{M(Oxidation (M))|F}][C(Carbamidomethyl (C))N]{M(Oxidation (M))|F}Y[RN];{[TV]|[{I|L}S]}HN{M(Oxidation (M))|F}Y{[RE]|[WV]}E[DP] 3.2567;2.8555;2.605;2.6048;2.358;2.0489;1.9527;1.7547;1.6477;1.546 +;-;-;-;-;-;-;-;-;- + 256 + 1 1.841 89341.6 1.0 2463 3354 5814 DOHH2_400M_050219_2,5819 DOHH2_400M_050219_2,5819,ETEREYFNRY False True ETEREYFNRY 30.775135 469.549365222454 1879408.75 5814.0 nc|ENSG00000122257|Q7Z6E9-2|RBBP6;;ENSG00000122257|ENST00000319715|RBBP6 4.421188592910767 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5820 30.789 800.0 261030.0 25 0 45881.0 -1 0 133 626.6404808255315 1876.8996130767944 3 626.9745971560478 MULTI CID FTMS 0 0 0 5814 252867.484375 1.0 0 0.0 6 2 TYNEAMDSPDQ 11 -1 82.616 0.0 0.0 4.4018 0.0 0.0 607.4182378624978 0.0 607.4182378624978 0.0 55.47456354238997 0.0 0.0 0 1.5629529932484498 0.0 0.9247425010840048 0.805462187404089 TYNEAMDSPDQ 4.4018 - 887 1 1.841 151828.2 0.9399999976158142 2464 3354 5814 DOHH2_400M_050219_2,5820 DOHH2_400M_050219_2,5820, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5821 30.803 800.0 229570.0 25 0 14913.0 -1 NQTMTTWMEIF 11 145 717.3082644578845 1432.601975982569 2 718.3150512576103 MULTI CID FTMS 0 0 0 5814 208142.875 0.5842943243049775 -6 0.5509796142578125 7 2 Oxidation (M) _NQTM(Oxidation (M))TTWM(Oxidation (M))EIF_ ENSG00000133704|ENST00000256079|IPO8;nc|ENSG00000133704|O15397-2|IPO8 8.745405648335112 0.8338865417133445 2 YYANQQAEH{M(Oxidation (M))|F}Y 11 -1 + 89.782 0.0 0.0 6.2671 6.2671 86.953 0.0 0.0 0.0 3.845760471140551 14.623979978989553 3.845760471140551 9.128498242810991 0 0.0 0.0 0.7302046884880937 1.174742501084005 YYANQQAEH{M(Oxidation (M))|F}Y;YYAGGQQAEH{M(Oxidation (M))|F}Y;YYAN[AG]QAEH{M(Oxidation (M))|F}Y;YYANQ[AG]AEH{M(Oxidation (M))|F}Y;YYANQQAEHY{M(Oxidation (M))|F};YYAGGQ[AG]AEH{M(Oxidation (M))|F}Y;YYAGG[AG]QAEH{M(Oxidation (M))|F}Y;YYANVNNEH{M(Oxidation (M))|F}Y;[HS]{[WT]|[RM]}QQAEH{M(Oxidation (M))|F}Y;YYAN[AG][AG]AEH{M(Oxidation (M))|F}Y 6.2671;5.6299;5.6299;5.6299;5.2463;4.9948;4.9948;4.883;4.8411;4.7677 -;-;-;-;-;-;-;-;-;- 12439 + 1 1.841 128137.1 0.800000011920929 2465 3354 5814 DOHH2_400M_050219_2,5821 DOHH2_400M_050219_2,5821,NQTMTTWMEIF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5822 30.806 185.0 475910.0 25 0 72640.0 + 42164 VSDDGTLHM 9 110 487.7158026665018 973.4170523998037 2 487.7164184451103 MULTI CID FTMS 0 0 0 5814 162198.453125 0.4788420977661264 -1 0.1136665344238281 8 Unmodified _VSDDGTLHM_ ENSG00000141101|ENST00000268802|NOB1 50.855029805455786 0.0384952370514206 2 VSDD{[SA]|[TG]}{I|L}HM 9 0 + 78.205 0.0 0.0 8.0341 8.0341 95.144 0.0 0.0 0.0 48.90381816490017 11.271211393095244 11.271211393095244 15.307040827922933 0 0.4247425010840047 2.0 0.6747425010840047 0.0 + + VSDD{[SA]|[TG]}{I|L}HM;VSDD[{M(Oxidation (M))|F}T]KY;VSDD{[SA]|[TG]}[HM]{I|L};VSD{[QG]|[NA]}[WE][PG];VSD{[QG]|[NA]}[WD][PA];VS{[WN]|[YH]}WE[PG];VS{[WN]|[YH]}WD[PA];[KA]{[CP]|[EA]}{[SA]|[TG]}DD[PA];{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[QG]|[NA]}D[PA];[PA][KC]{[SA]|[TG]}DD[PA] 8.0341;6.4616;5.8411;4.1743;4.1468;3.5789;3.5514;2.1255;1.5482;1.511 +;-;-;-;-;-;-;-;-;- + 253 + 1 1.841 70921.3 1.0 2466 3354 5814 DOHH2_400M_050219_2,5822 DOHH2_400M_050219_2,5822,VSDDGTLHM True True VSDDGTLHM 30.806374 487.71641844511 1784749.0 5814.0 ENSG00000141101|ENST00000268802|NOB1 7.064864794413249 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5823 30.814 448.0 298610.0 25 0 59047.0 33342 SGDYECHVY 9 167 536.7073556043858 1071.4001582755716 2 536.7075073122978 MULTI CID FTMS 0 0 0 5814 150068.15625 1.0 0 0.0 9 Unmodified _SGDYECHVY_ ENSG00000105711|ENST00000262631|SCN1B;nc|ENSG00000105711|Q07699-2|SCN1B 28.486842064014134 0.1687311288560894 2 [SG]D 3 6 25.775 0.0 0.0 2.4057 0.0 0.0 0.0 809.2987154596311 809.2987154596311 -0.1425941536692221 0.0 -0.1425941536692221 0.0 0 0.6109243748081782 1.2218487496163564 0.0 0.0 + [SG]D 2.4057 + + 394 + 1 1.841 106906.5 1.0 2467 3354 5814 DOHH2_400M_050219_2,5823 DOHH2_400M_050219_2,5823,SGDYECHVY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5824 30.828 800.0 148640.0 25 0 20162.0 + 40893 VLRPGTAL 8 160 413.7611192363274 0 413.7613403201103 PEAK CID FTMS 0 0 0 5814 90395.5625 1.0 0 0.0 10 Unmodified _VLRPGTAL_ ENSG00000261150|ENST00000615648|EPPK1 32.30548876998284 0.2094692153732555 2 A 1 7 8.4113 0.0 0.0 1.0189 0.0 0.0 131.0950642316422 620.3530279068955 751.4480921385377 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 + A 1.0189 + + 29 1 1.841 95233.3 0.7799999713897705 2468 3354 5814 DOHH2_400M_050219_2,5824 DOHH2_400M_050219_2,5824,VLRPGTAL False False VLRPGTAL 30.82816 413.76134032011 403537.96875 5814.0 ENSG00000261150|ENST00000615648|EPPK1 2.948905686537425 2.0 True 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5825 30.843 766.0 217310.0 25 0 12260.0 + 11308 GEVNDIKTRSW 11 159 435.5582514673056 1303.6529250021167 3 435.5578491091728 MULTI CID FTMS 0 0 0 5814 78450.3671875 0.8224766476239401 -1 0.1136665344238281 11 Unmodified _GEVNDIKTRSW_ ENSG00000124491|ENST00000264870|F13A1 14.824719086485125 0.7267755269206433 2 {[DA]|[EG]}VND{I|L}K 7 4 59.226 0.0 0.0 4.5431 0.0 0.0 0.0 545.2486902272481 545.2486902272481 38.89116070235083 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.4247425010840047 + {[DA]|[EG]}VND{I|L}K 4.5431 + + 262 + 1 1.841 132510.4 1.0 2469 3354 5814 DOHH2_400M_050219_2,5825 DOHH2_400M_050219_2,5825,GEVNDIKTRSW False True GEVNDIKTRSW 30.842576 435.557849109173 413856.6875 5814.0 ENSG00000124491|ENST00000264870|F13A1 6.787123362223308 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5826 30.848 274.0 303890.0 25 0 25221.0 -1 0 112 560.3278154794277 559.3205390128277 1 560.3279296755791 MULTI CID FTMS 0 0 0 5814 238465.921875 0.0551704587124868 -13 1.0402164459228516 12 2 Y 1 -1 12.218 0.0 0.0 2.1845 0.0 0.0 378.2462419930996 0.0 378.2462419930996 0.0 2.886182038014651 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.1845 - 27 + 1 1.841 68493.1 1.0 2470 3354 5814 DOHH2_400M_050219_2,5826 DOHH2_400M_050219_2,5826, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5827 30.851 202.0 261290.0 25 0 15356.0 + 813 AESVVPARM 9 97 480.2523737978658 958.4901946625316 2 480.2522765994072 MULTI CID FTMS 0 0 0 5814 162799.8125 1.0 0 0.0 13 Unmodified _AESVVPARM_ ENSG00000167508|ENST00000301012|MVD;ENST00000565149.5_1_16:88718935-88722722:-|nuORF 30.63653989081413 0.1413794767160703 2 [VS]{[WT]|[RM]}VVST 8 8 27.216 0.0 0.0 2.8394 0.0 0.0 0.0 96.00945670770662 96.00945670770662 16.378264776604965 0.0 0.0 0.0 0 0.805462187404089 0.744727494896694 0.0 0.2742275032520141 [VS]{[WT]|[RM]}VVST 2.8394 - 315 1 1.841 49207.6 1.0 2471 3354 5814 DOHH2_400M_050219_2,5827 DOHH2_400M_050219_2,5827,AESVVPARM False True AESVVPARM 30.851478 480.252276599407 786929.8125 5814.0 ENST00000565149.5_1_16:88718935-88722722:-|nuORF;;ENSG00000167508|ENST00000301012|MVD 4.248474836349487 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5828 30.855 160.0 478840.0 25 0 49250.0 + 41096 VNKIKEIAV 9 111 507.3211554138125 1012.627757894425 2 507.3213989138603 MULTI CID FTMS 0 0 0 5814 138937.796875 0.2401619431317612 -1 0.1136665344238281 14 Unmodified _VNKIKEIAV_ ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 61.60191391372663 0.0251951588191061 2 VNK{I|L} 4 5 57.449 0.0 0.0 5.6732 0.0 0.0 0.0 555.3144063808704 555.3144063808704 26.4776343281828 0.0 0.0 0.0 0 1.25 1.3010299956639813 0.0 0.0 + VNK{I|L} 5.6732 + + 4680 + 1 1.841 63096.6 1.0 2472 3354 5814 DOHH2_400M_050219_2,5828 DOHH2_400M_050219_2,5828,VNKIKEIAV True True VNKIKEIAV 30.854626 507.32139891386 3492675.25 5814.0 nc|ENSG00000135624|Q99832-3|CCT7;;nc|ENSG00000135624|Q99832-4|CCT7;;ENSG00000135624|ENST00000258091|CCT7;;ENST00000461290.5_1_2:73461506-73471178:+|nuORF -0.4919317563374837 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5829 30.868 800.0 70294.0 25 0 10688.0 -1 QEDQVSKCLHY 11 62 703.8217425610391 1405.628932188878 2 703.8214599490166 MULTI CID FTMS 0 0 0 5814 102944.9765625 1.0 0 0.0 15 Carbamidomethyl (C) _QEDQVSKC(Carbamidomethyl (C))LHY_ ENST00000369046.8_1_6:107077528-107088354:+|nuORF;ENST00000467262.1_1_6:107077499-107088354:+|nuORF 4.897010918128616 0.8520435188433833 2 Y 1 -1 19.732 0.0 0.0 1.4038 0.0 0.0 1224.5552150031342 0.0 1224.5552150031342 0.0 5.64719157343033 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Y 1.4038 + + 10 + 1 1.841 47777.4 0.6100000143051147 2473 3354 5814 DOHH2_400M_050219_2,5829 DOHH2_400M_050219_2,5829,QEDQVSKCLHY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5831 30.878 424.0 239180.0 25 0 19943.0 + 7125 EEMPATKGGF 10 116 533.7475488735184 1065.4805448138368 2 533.7473632693291 MULTI CID FTMS 0 0 0 5830 108520.5625 0.0521178812764708 2 -0.188577651977539 1 Unmodified _EEMPATKGGF_ ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-2|NUP153;nc|ENSG00000124789|P49790-3|NUP153 31.26834338654808 0.266153677697784 2 EEM 3 7 34.794 0.0 0.0 3.2655 0.0 0.0 0.0 673.3319906969024 673.3319906969024 21.298793729568857 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.6861818737241735 0.0 + EEM 3.2655 + + 148 1 1.841 83374.5 1.0 2474 3355 5830 DOHH2_400M_050219_2,5831 DOHH2_400M_050219_2,5831,EEMPATKGGF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5832 30.881 97.0 832490.0 25 0 48606.0 + 788 AESLIAKKI 9 99 486.808184613647 971.601816294094 2 486.8080322146416 MULTI CID FTMS 0 0 0 5830 544080.5625 0.2749112828687292 -1 0.1063766479492187 2 Unmodified _AESLIAKKI_ ENSG00000166226|ENST00000299300|CCT2;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2 56.17704186161178 0.0281986971544335 2 {[CP]|[EA]}S{I|L}{I|L}AKK{I|L} 9 0 + 43.95 0.0 0.0 4.5234 4.5234 85.962 0.0 0.0 0.0 17.908719946578305 10.968878562567532 10.968878562567532 25.09418057675049 0 1.2302046884880935 0.0 0.0 0.0 + + {[CP]|[EA]}S{I|L}{I|L}AKK{I|L};{[WT]|[RM]}{I|L}RRK{I|L};{I|L}{[WT]|[RM]}RRK{I|L} 4.5234;1.9407;1.9171 +;-;- + 567 + 1 1.841 68548.6 1.0 2475 3355 5830 DOHH2_400M_050219_2,5832 DOHH2_400M_050219_2,5832,AESLIAKKI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5833 30.883 108.0 899440.0 25 0 234870.0 + 16164 IVAVFHHIV 9 81 517.8094553645409 1033.6043577958817 2 517.8088256716728 MULTI CID FTMS 0 0 0 5830 430034.40625 0.5419378699040452 -1 0.1063766479492187 3 Unmodified _IVAVFHHIV_ REV__ENSG00000090661|ENST00000251363|CERS4;REV__ENST00000557925.1_1_19:8321089-8326990:+|nuORF;REV__ENST00000558501.5_1_19:8275630-8321979:+|nuORF 9.347437153973935 0.588369872918737 2 {I|L}V 2 -1 19.464 0.0 0.0 1.8831 0.0 0.0 0.0 818.426943427918 818.426943427918 12.474250108400469 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 1.8831 + + 23 + 1 1.841 78882.6 1.0 2476 3355 5830 DOHH2_400M_050219_2,5833 DOHH2_400M_050219_2,5833,IVAVFHHIV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5834 30.885 103.0 553840.0 25 0 73127.0 + 4912 DGKYSQVL 8 84 455.2376770066194 908.4608010800388 2 455.2367736697197 MULTI CID FTMS 0 0 0 5830 372103.03125 0.2413056150276208 -2 0.2200431823730468 4 Unmodified _DGKYSQVL_ ENSG00000231500|ENST00000439602|RPS18;ENST00000407538.2_1_6:141243712-141243922:-|nuORF;ENST00000445477.1_1_22:31955550-31955922:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 39.957323273325 0.2350051964751539 2 SQV{I|L} 4 4 28.544 0.0 0.0 3.142 0.0 0.0 463.2069569318375 0.0 463.2069569318375 0.0 13.05970632012567 0.0 0.0 0 0.8182503180159344 0.0 0.3807196863200844 0.4247425010840047 + SQV{I|L} 3.142 + + 71 1 1.841 51001.4 1.0 2477 3355 5830 DOHH2_400M_050219_2,5834 DOHH2_400M_050219_2,5834,DGKYSQVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5835 30.888 138.0 454480.0 25 0 38927.0 + 444 AEFEQGHQF 9 92 546.7410282799455 1091.4675036266908 2 546.7408325076103 MULTI CID FTMS 0 0 0 5830 355488.71875 1.0 0 0.0 5 Unmodified _AEFEQGHQF_ ENSG00000234127|ENST00000454678|TRIM26 49.93300154707207 0.0405168250806675 2 {[CP]|[EA]}{M(Oxidation (M))|F}EQGHQ{M(Oxidation (M))|F} 9 0 + 56.903 0.0 0.0 5.2135 5.2135 84.355 0.0 0.0 0.0 7.147642715192504 14.790335977455593 7.147642715192504 9.208187539523747 0 0.4247425010840047 0.0 0.5 1.424742501084005 + + {[CP]|[EA]}{M(Oxidation (M))|F}EQGHQ{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}E[AG]GHQ{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}EQGH[AG]{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}EQ[WE][PG];{[CP]|[EA]}{M(Oxidation (M))|F}EQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DP];{[CP]|[EA]}{M(Oxidation (M))|F}[WQ]HQ{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}E[AG]GH[AG]{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}E[AG][WE][PG];{[CP]|[EA]}{M(Oxidation (M))|F}E[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DP];{[CP]|[EA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}{[ET]|[MV]} 5.2135;4.3698;3.9117;3.8584;2.8083;2.5374;2.2248;2.1675;1.9647;1.944 +;-;-;-;-;-;-;-;-;- + 580 + 1 1.841 55507.7 1.0 2478 3355 5830 DOHH2_400M_050219_2,5835 DOHH2_400M_050219_2,5835,AEFEQGHQF True True AEFEQGHQF 30.887895 546.74083250761 1980106.25 5830.0 ENSG00000234127|ENST00000454678|TRIM26 8.747149785359701 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5836 30.893 294.0 354610.0 25 0 29146.0 + -1 FHNLNYWCQYF 11 79 796.3425660393931 1590.670579145586 2 796.8441650271416 MULTI CID FTMS 0 0 0 5830 292514.4375 0.9326946550266272 -1 0.1063766479492187 6 Carbamidomethyl (C) _FHNLNYWC(Carbamidomethyl (C))QYF_ REV__L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|122|1|anti-sense 2.9952420565917617 0.861016188266951 2 {M(Oxidation (M))|F}ANQQAED[MT]Q 11 -1 79.272 0.0 0.0 4.9835 0.0 0.0 309.1426993621861 0.0 309.1426993621861 0.0 72.2819328438236 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 1.1989700043360187 {M(Oxidation (M))|F}ANQQAED[MT]Q 4.9835 - 1135 + 1 1.841 76945.9 1.0 2479 3355 5830 DOHH2_400M_050219_2,5836 DOHH2_400M_050219_2,5836,FHNLNYWCQYF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5837 30.897 192.0 505380.0 25 0 145160.0 + 31702 RRNPGVVIY 9 80 537.3141288118363 1072.6137046904726 2 537.3141357302666 MULTI CID FTMS 0 0 0 5830 263999.3125 1.0 0 0.0 7 Unmodified _RRNPGVVIY_ ENSG00000055950|ENST00000318364|MRPL43;nc|ENSG00000055950|Q8N983-2|MRPL43;nc|ENSG00000055950|Q8N983-3|MRPL43;nc|ENSG00000055950|Q8N983-6|MRPL43;nc|ENSG00000055950|Q8N983-7|MRPL43;nc|ENSG00000055950|Q8N983|MRPL43 44.40701690623563 0.0526327925666318 2 {I|L}Y 2 7 26.013 0.0 0.0 2.4252 0.0 0.0 778.4564264206043 0.0 778.4564264206043 0.0 5.164484867017972 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {I|L}Y 2.4252 + + 42 1 1.841 80441.7 1.0 2480 3355 5830 DOHH2_400M_050219_2,5837 DOHH2_400M_050219_2,5837,RRNPGVVIY True True RRNPGVVIY 30.897005 537.314135730267 3331823.5 5830.0 nc|ENSG00000055950|Q8N983|MRPL43;;nc|ENSG00000055950|Q8N983-6|MRPL43;;ENSG00000055950|ENST00000318364|MRPL43;;nc|ENSG00000055950|Q8N983-7|MRPL43;;nc|ENSG00000055950|Q8N983-3|MRPL43;;nc|ENSG00000055950|Q8N983-2|MRPL43 5.17184321085612 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5838 30.904 369.0 309360.0 25 0 33984.0 + 9482 FLDESRSTQY 10 115 623.2910002051295 1244.567447477059 2 623.2900878787041 MULTI CID FTMS 0 0 0 5830 225351.484375 0.0275994485259897 4 -0.2398891448974609 8 Unmodified _FLDESRSTQY_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 63.22749603027936 0.0281198777558511 2 {M(Oxidation (M))|F}{I|L}DE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VG]QY 10 4 + 65.481 0.0 0.0 5.2614 5.2614 87.839 0.0 0.0 0.0 46.97621246364342 15.026975159433531 15.026975159433531 18.433181346311464 0 1.6549471895720984 0.0 0.3252574989159953 0.805462187404089 {M(Oxidation (M))|F}{I|L}DE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VG]QY;{M(Oxidation (M))|F}{I|L}DE[RD]H[WQ];{M(Oxidation (M))|F}{I|L}D[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}TD{[QN]|[E{I|L}]|[KN]};{M(Oxidation (M))|F}{I|L}D[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[KG]{[WS]|[C(Carbamidomethyl (C)){I|L}]};{M(Oxidation (M))|F}{I|L}DE[YT][KG]{[WS]|[C(Carbamidomethyl (C)){I|L}]};{M(Oxidation (M))|F}{I|L}D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VTD{[QN]|[E{I|L}]|[KN]};{M(Oxidation (M))|F}{I|L}D[{M(Oxidation (M))|F}V][PG]H[WQ];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KP][RD]ED{I|L}E;[YE][{I|L}A]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]D{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DT{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]DG[KG] 5.2614;3.7803;3.6257;3.104;3.104;3.0641;3.0404;2.86;2.6213;2.5481 -;-;-;-;-;-;-;-;-;- 876 + 1 1.841 85705.3 1.0 2481 3355 5830 DOHH2_400M_050219_2,5838 DOHH2_400M_050219_2,5838,FLDESRSTQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5839 30.908 222.0 603030.0 25 0 31460.0 + 31703 RRNPGVVIY 9 118 358.5451023641614 1072.6134776926842 3 358.5452148318291 MULTI CID FTMS 0 0 0 5830 213334.65625 1.0 0 0.0 9 Unmodified _RRNPGVVIY_ ENSG00000055950|ENST00000318364|MRPL43;nc|ENSG00000055950|Q8N983-2|MRPL43;nc|ENSG00000055950|Q8N983-3|MRPL43;nc|ENSG00000055950|Q8N983-6|MRPL43;nc|ENSG00000055950|Q8N983-7|MRPL43;nc|ENSG00000055950|Q8N983|MRPL43 11.640296217721598 0.521594087909532 2 V{I|L}Y 3 6 24.425 0.0 0.0 2.2771 0.0 0.0 679.3897509747763 0.0 679.3897509747763 0.0 13.455612550363796 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + V{I|L}Y 2.2771 + + 43 1 1.841 112499.4 1.0 2482 3355 5830 DOHH2_400M_050219_2,5839 DOHH2_400M_050219_2,5839,RRNPGVVIY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5840 30.916 484.0 421250.0 25 0 46499.0 + 4290 DAREKISL 8 136 466.2641386938826 930.5137244545654 2 466.2642089724541 MULTI CID FTMS 0 0 0 5830 164004.921875 0.0694799210642818 -2 0.2200431823730468 10 Unmodified _DAREKISL_ ENSG00000100227|ENST00000252115|POLDIP3;ENST00000491021.1_1_22:42993722-42998991:-|nuORF;nc|ENSG00000100227|Q9BY77-2|POLDIP3 70.33199760932243 0.1115515747865724 2 {[DA]|[EG]}REK{I|L}S{I|L} 8 0 + 66.603 0.0 0.0 7.1576 7.1576 92.755 0.0 0.0 0.0 11.898714592203042 14.024174299985006 11.898714592203042 11.773174902439578 0 1.453119819790884 1.2218487496163564 0.9163865622122672 0.2887254899964357 + + {[DA]|[EG]}REK{I|L}S{I|L};{[DA]|[EG]}REKS{I|L}{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}W{I|L}S{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}AD{I|L}S{I|L};{[DA]|[EG]}RT[VG]{I|L}S{I|L};{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}R{I|L}S{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}A{I|L}DS{I|L};{I|L}D[RV][QT]S{I|L};D{I|L}[RV][QT]S{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}WS{I|L}{I|L} 7.1576;5.8924;5.8789;5.8239;5.6901;5.596;5.5101;5.3565;5.2708;4.6137 +;-;-;-;-;-;-;-;-;- + 700 1 1.841 158530.3 1.0 2483 3355 5830 DOHH2_400M_050219_2,5840 DOHH2_400M_050219_2,5840,DAREKISL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5841 30.93 800.0 181750.0 25 0 46004.0 + 30567 REQAEEERYF 10 97 678.8134523167192 1355.6123517002384 2 678.8127929568291 MULTI CID FTMS 0 0 0 5830 101740.5078125 1.0 0 0.0 11 Unmodified _REQAEEERYF_ ENSG00000130770|ENST00000335514|ATP5IF1;nc|ENSG00000130770|Q9UII2-2|ATP5IF1;nc|ENSG00000130770|Q9UII2-3|ATP5IF1 40.714236015149055 0.1500248939241792 2 [VG]EQAEEER{M(Oxidation (M))|F}Y 11 4 + 87.969 0.0 0.0 6.4892 6.4892 79.526 0.0 0.0 0.0 6.064247967304127 1.549019599857445 1.549019599857445 1.549019599857445 0 1.274227503252014 1.5228787452803376 0.3494850021680094 0.3252574989159953 [VG]EQAEEER{M(Oxidation (M))|F}Y;[VG]EQAEEERY{M(Oxidation (M))|F};[VG]E[AG]AEEER{M(Oxidation (M))|F}Y;[VG]E[AG]AEEERY{M(Oxidation (M))|F};[VG]EQAEEE[VG]{M(Oxidation (M))|F}Y;[VG]EQAEEE[VG]Y{M(Oxidation (M))|F};[VG][DG]REEER{M(Oxidation (M))|F}Y;[VG][DG]REEERY{M(Oxidation (M))|F};[VG]E[AG]AEEE[VG]{M(Oxidation (M))|F}Y;[VG]E[AG]AEEE[VG]Y{M(Oxidation (M))|F} 6.4892;6.375;5.8159;5.7016;5.5759;5.4617;5.1258;5.0116;4.9048;4.7905 -;-;-;-;-;-;-;-;-;- 1022 + 1 1.841 107196.6 0.6200000047683716 2484 3355 5830 DOHH2_400M_050219_2,5841 DOHH2_400M_050219_2,5841,REQAEEERYF False True REQAEEERYF 30.930238 678.812792956829 771209.625 5830.0 ENSG00000130770|ENST00000335514|ATP5IF1;;nc|ENSG00000130770|Q9UII2-3|ATP5IF1;;nc|ENSG00000130770|Q9UII2-2|ATP5IF1 7.33909289042155 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5842 30.944 800.0 113580.0 25 0 10310.0 8543 ETGEQIQSWY 10 126 620.7779776564296 1239.541402379659 2 620.7787963747978 MULTI CID FTMS 0 0 0 5830 106011.1171875 1.0 0 0.0 12 Unmodified _ETGEQIQSWY_ ENSG00000254986|ENST00000531863|DPP3;nc|ENSG00000254986|Q9NY33-4|DPP3 32.30548876998284 0.2428506522065767 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TA 4 9 18.02 0.0 0.0 1.4538 0.0 0.0 0.0 820.3650162314747 820.3650162314747 0.533047416284731 0.0 0.0 0.0 0 0.5 0.0 0.6109243748081782 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TA 1.4538 - 423 1 1.841 71479.4 0.6200000047683716 2485 3355 5830 DOHH2_400M_050219_2,5842 DOHH2_400M_050219_2,5842,ETGEQIQSWY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5843 30.948 118.0 336950.0 25 0 30840.0 + -1 KVYNHLTMK 9 65 575.308535374137 1148.602517815074 2 575.8095580935478 MULTI CID FTMS 0 0 0 5830 99341.1015625 0.2174469805802835 2 -0.188577651977539 13 Oxidation (M) _KVYNHLTM(Oxidation (M))K_ REV__ENSG00000006459|ENST00000397560|KDM7A;REV__nc|ENSG00000006459|Q6ZMT4-2|KDM7A 13.042465956692816 0.4836390050082244 2 T{M(Oxidation (M))|F}K 3 -1 30.292 0.0 0.0 2.6373 0.0 0.0 754.4141460883146 0.0 754.4141460883146 0.0 16.312281309285623 0.0 0.0 0 0.805462187404089 0.0 0.0 0.2059771852360797 T{M(Oxidation (M))|F}K 2.6373 + + 62 + 1 1.841 35998.8 1.0 2486 3355 5830 DOHH2_400M_050219_2,5843 DOHH2_400M_050219_2,5843,KVYNHLTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5844 30.953 269.0 498660.0 25 0 192780.0 20202 LLALRLALED 10 94 376.2326241063635 0 376.2324096560478 PEAK CID FTMS 0 0 0 5830 91625.71875 1.0 0 0.0 14 Unmodified _LLALRLALED_ ENSG00000132481|ENST00000254816|TRIM47;ENST00000587339.2_2_17:73870566-73874273:-|nuORF;ENST00000593089.1_1_17:73871955-73872459:-|nuORF;nc|ENSG00000132481|Q96LD4-2|TRIM47 7.289230182591677 0.3953776778296116 2 {I|L} 1 9 6.9897 0.0 0.0 0.9314 0.0 0.0 552.2770025078459 82.06697260074452 634.3439751085904 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.9314 + + 6 + 1 1.841 112029.9 1.0 2487 3355 5830 DOHH2_400M_050219_2,5844 DOHH2_400M_050219_2,5844,LLALRLALED False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5845 30.967 800.0 215660.0 25 0 21818.0 -1 SSRSATCNFY 10 120 617.759571366609 1233.5045898000178 2 617.7598754763603 MULTI CID FTMS 0 0 0 5830 85528.875 0.5638213190942352 -1 0.1063766479492187 15 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))SSRSATC(Carbamidomethyl (C))NFY_ ENST00000279907.11_2_12:100453240-100453282:-|nuORF 17.11289562659939 0.5604042439455784 2 EAQQNA{M(Oxidation (M))|F}Y 8 -1 70.712 0.0 0.0 5.7326 0.0 0.0 264.0857986021501 0.0 264.0857986021501 0.0 43.2502769882945 0.0 0.0 0 0.5 0.0 0.5994850021680094 1.1861818737241734 EAQQNA{M(Oxidation (M))|F}Y 5.7326 - 1421 1 1.841 130014.3 0.4799999892711639 2488 3355 5830 DOHH2_400M_050219_2,5845 DOHH2_400M_050219_2,5845,SSRSATCNFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5846 30.981 800.0 65877.0 25 0 2957.6 + -1 ASTDYSTYSQAAA 13 109 689.2946013069703 1376.5746496807403 2 689.2911865115166 MULTI CID FTMS 0 0 0 5830 86588.59375 0.8839509953813921 1 -0.1156539916992187 16 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))IC(Carbamidomethyl (C))RVC(Carbamidomethyl (C))HGTSQ_ nc|ENSG00000182944|Q01844-6|EWSR1;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-2|EWSR1;ENSG00000182944|ENST00000397938|EWSR1 5.296884461304476 0.8501568894076437 2 [PG]ED 4 -1 13.153 0.0 0.0 0.95551 0.0 0.0 0.0 975.407510358728 975.407510358728 1.4721384465966718 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.6549471895720984 0.0 [PG]ED 0.95551 - 234 1 1.841 41249.0 0.4900000095367431 2489 3355 5830 DOHH2_400M_050219_2,5846 DOHH2_400M_050219_2,5846,CICRVCHGTSQ False False ASTDYSTYSQAAA 30.980626 689.291186511517 701211.6875 5830.0 nc|ENSG00000182944|Q01844-6|EWSR1;;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;;nc|ENSG00000182944|Q01844-5|EWSR1;;nc|ENSG00000182944|Q01844-4|EWSR1;;nc|ENSG00000182944|Q01844-3|EWSR1;;nc|ENSG00000182944|Q01844-2|EWSR1;;ENSG00000182944|ENST00000397938|EWSR1 1.538991133371989 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5847 30.984 104.0 506010.0 25 0 51664.0 + 277 ADIDTRSEF 9 93 527.2446082914078 1052.4746636496154 2 527.2452270388603 MULTI CID FTMS 0 0 0 5830 202519.90625 0.5110606952675857 -1 0.1063766479492187 17 Unmodified _ADIDTRSEF_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 34.40172386719151 0.1061884637610825 2 {[DA]|[EG]}{I|L}D 4 5 40.758 0.0 0.0 3.8726 0.0 0.0 0.0 635.2796400661493 635.2796400661493 16.620768972555595 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.7302046884880937 0.0 + {[DA]|[EG]}{I|L}D 3.8726 + + 127 + 1 1.841 44377.2 1.0 2490 3355 5830 DOHH2_400M_050219_2,5847 DOHH2_400M_050219_2,5847,ADIDTRSEF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5849 30.989 44.0 930040.0 25 0 93258.0 + 35258 SSFIGKVKS 9 70 476.7768777738322 951.5392026144644 2 476.7767822146416 MULTI CID FTMS 0 0 0 5848 815109.3125 0.246365184079629 1 -0.0729236602783203 1 Unmodified _SSFIGKVKS_ REV__ENST00000335500.8_1_17:42474164-42474308:-|nuORF 22.736283301280096 0.2418982879461534 2 {[CA]|SS}{M(Oxidation (M))|F}{I|L}[KS]VGK 9 -1 + 35.615 0.0 0.0 3.7428 3.7428 83.852 0.0 0.0 0.0 20.129955717802424 10.70692060105562 10.70692060105562 35.614505782842706 0 0.805462187404089 0.0 0.3252574989159953 0.1344005005252609 {[CA]|SS}{M(Oxidation (M))|F}{I|L}[KS]VGK 3.7428 - 40 + 1 1.85 36035.0 1.0 2491 3356 5848 DOHH2_400M_050219_2,5849 DOHH2_400M_050219_2,5849,SSFIGKVKS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5850 31.0 635.0 166750.0 25 0 17719.0 + 8937 FAMNDESVFY 10 120 611.7593452268318 1221.5041375204637 2 611.7598754763603 MULTI CID FTMS 0 0 0 5848 113138.1171875 0.0359402294531492 3 -0.1242351531982421 2 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 19.256988751693697 0.5244284437930726 2 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 69.984 0.0 0.0 5.7294 5.7294 76.902 0.0 0.0 0.0 1.5308998699194376 8.800887149282062 1.5308998699194376 1.5308998699194376 0 1.0 0.0 0.555462187404089 0.805462187404089 [HD]EAQQNA{M(Oxidation (M))|F}Y;{[CT]|[{M(Oxidation (M))|F}G]}T{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}S{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;{[CT]|[{M(Oxidation (M))|F}G]}T{M(Oxidation (M))|F}[AG]QNA{M(Oxidation (M))|F}Y;{[CT]|[{M(Oxidation (M))|F}G]}T{M(Oxidation (M))|F}Q[AG]NA{M(Oxidation (M))|F}Y;{[CT]|[{M(Oxidation (M))|F}G]}T{M(Oxidation (M))|F}QQGGA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}S{M(Oxidation (M))|F}Q[AG]NA{M(Oxidation (M))|F}Y 5.7294;5.604;5.2783;4.9791;4.9791;4.9791;4.8538;4.8538;4.8538;4.528 -;-;-;-;-;-;-;-;-;- 925 1 1.85 81822.7 1.0 2492 3356 5848 DOHH2_400M_050219_2,5850 DOHH2_400M_050219_2,5850,FAMNDESVFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5851 31.002 90.0 982670.0 25 0 137450.0 + 13882 HVPEHAVVL 9 79 500.7825017365613 999.5504505399224 2 500.7825805544853 MULTI CID FTMS 0 0 0 5848 579765.25 0.4176617088578243 -5 0.5529098510742188 3 Unmodified _HVPEHAVVL_ ENSG00000169710|ENST00000306749|FASN 21.74664581756881 0.2544899275067181 2 [HV]A[EP]HVV{I|L} 9 2 + 44.248 0.0 0.0 4.4268 4.4268 75.669 0.0 0.0 0.0 16.22241220664947 16.043235216553725 16.043235216553725 4.771212547196626 0 0.4124379954164593 2.0 0.0 0.0 [HV]A[EP]HVV{I|L};[HV][EP]HAVV{I|L};[HV]A[EP]VHV{I|L};[HV][EP]AHVV{I|L};[HV][EP]AVHV{I|L};[HV][TP][TP]HV{I|L};[HV][TP]H[TP]V{I|L} 4.4268;3.9494;3.9494;3.6483;3.1709;2.0735;2.0735 -;+;-;-;-;-;- + 222 1 1.85 71584.4 1.0 2493 3356 5848 DOHH2_400M_050219_2,5851 DOHH2_400M_050219_2,5851,HVPEHAVVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5852 31.005 137.0 382090.0 25 0 34541.0 + 38451 TSDDSAVNMY 10 90 551.7217569778004 1101.4289610224007 2 551.7215453982353 MULTI CID FTMS 0 0 0 5848 445774.6875 1.0 0 0.0 4 Unmodified _TSDDSAVNMY_ ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L 52.268347100219714 0.0668375294751462 2 {[MG]|[TS]}DDGTVNMY 10 2 + 40.607 0.0 0.0 3.6868 3.6868 67.946 0.0 0.0 0.0 0.5699987742490862 7.414763047585069 0.5699987742490862 0.5699987742490862 0 0.8935078169319297 0.0 1.7971062485323517 0.4247425010840047 {[MG]|[TS]}DDGTVNMY;{[DS]|[MA]|[CV]|TT}ADSTVNMY;{[DS]|[MA]|[CV]|TT}{[ES]|[DT]|[{I|L}C]}GTVNMY;{[MG]|[TS]}DDGTVGGMY;{[DS]|[MA]|[CV]|TT}ADSTVGGMY;{[DS]|[MA]|[CV]|TT}AD{[WT]|[RM]}NMY;{[DS]|[MA]|[CV]|TT}{[ES]|[DT]|[{I|L}C]}GTVGGMY;{[MG]|[TS]}DDG[WK]MY;AA{NN|[MP]|[D{I|L}]|[EV]}CCVNMY;{[DS]|[MA]|[CV]|TT}AD{[WT]|[RM]}GGMY 3.6868;3.635;3.1454;2.4691;2.4174;2.0577;1.9277;1.3266;1.3255;1.2217 -;-;-;-;-;-;-;-;-;- 205 1 1.85 43457.4 1.0 2494 3356 5848 DOHH2_400M_050219_2,5852 DOHH2_400M_050219_2,5852,TSDDSAVNMY True True TSDDSAVNMY 31.004973 551.721545398235 2630040.25 5848.0 nc|ENSG00000121210|A2VDJ0|TMEM131L;;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;;ENSG00000121210|ENST00000409959|TMEM131L;;nc|ENSG00000121210|A2VDJ0-6|TMEM131L 6.79070520401001 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5853 31.008 144.0 426330.0 25 0 44108.0 + 25504 NEMEAPTTAY 10 107 563.7390909449916 1125.4636289567832 2 563.7396118044853 MULTI CID FTMS 0 0 0 5848 425258.65625 0.8772617330079124 -1 0.1156539916992187 5 Unmodified _NEMEAPTTAY_ ENSG00000180353|ENST00000314583|HCLS1 24.99096001346401 0.4071966087057876 2 {[QD]|[EN]|[WG]|[KD]|[RS]}MEA 5 5 24.052 0.0 0.0 2.1371 0.0 0.0 0.0 548.2338324351396 548.2338324351396 3.08333770138524 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.3054621874040891 0.1803115997617927 + {[QD]|[EN]|[WG]|[KD]|[RS]}MEA 2.1371 + + 140 1 1.85 53993.3 1.0 2495 3356 5848 DOHH2_400M_050219_2,5853 DOHH2_400M_050219_2,5853,NEMEAPTTAY False True NEMEAPTTAY 31.007869 563.739611804485 2806797.75 5848.0 ENSG00000180353|ENST00000314583|HCLS1 6.790652434031169 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5854 31.011 148.0 431780.0 25 0 46098.0 + 6769 EEADHTVGF 9 93 502.7196318062386 1003.4247106792772 2 502.7198364138603 MULTI CID FTMS 0 0 0 5848 269035.09375 1.0 0 0.0 6 Unmodified _EEADHTVGF_ ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188 13.50788311687929 0.4710407108020397 2 GV[HC]{[DS]|[MA]|[CV]|TT}G{M(Oxidation (M))|F} 8 5 35.935 0.0 0.0 3.5812 0.0 0.0 183.0875657591585 0.0 183.0875657591585 0.0 21.1603276752652 0.0 0.0 0 0.0 0.0 1.6549471895720984 0.0 GV[HC]{[DS]|[MA]|[CV]|TT}G{M(Oxidation (M))|F} 3.5812 - 368 + 1 1.85 54213.2 1.0 2496 3356 5848 DOHH2_400M_050219_2,5854 DOHH2_400M_050219_2,5854,EEADHTVGF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5855 31.016 279.0 477130.0 25 0 53158.0 -1 CPNARCQFAFY 11 112 717.3082644578845 1432.601975982569 2 717.3079101443291 MULTI CID FTMS 0 0 0 5848 243366.6875 0.2238246162144687 -4 0.4517440795898437 7 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PNARC(Carbamidomethyl (C))QFAFY_ ENSG00000129353|ENST00000335757|SLC44A2;ENST00000589561.5_1_19:10746968-10754058:+|nuORF;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;nc|ENSG00000129353|Q8IWA5-3|SLC44A2 24.020572477871973 0.5281922720044371 2 [AG]G{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y 13 -1 + 105.11 0.0 0.0 7.3367 7.3367 80.655 0.0 0.0 0.0 0.621479067488437 16.642078980768062 0.621479067488437 0.621479067488437 0 1.0 1.3979400086720375 0.7614393726401688 1.6549471895720984 [AG]G{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;[HD][NP]EAQQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQNA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y 7.3367;7.2933;6.8397;6.8202;6.7034;6.7034;6.7034;6.6582;6.6582;6.6582 -;-;-;-;-;-;-;-;-;- 3331 1 1.85 97990.7 1.0 2497 3356 5848 DOHH2_400M_050219_2,5855 DOHH2_400M_050219_2,5855,CPNARCQFAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5856 31.019 127.0 415750.0 25 0 34973.0 + 17251 KLMRRYIAM 9 93 394.5596944258402 1180.657253877721 3 394.5594360232353 MULTI CID FTMS 0 0 0 5848 201135.796875 1.0 0 0.0 8 Unmodified _KLMRRYIAM_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7 8.745405648335112 0.6093864874670651 2 AM 2 7 17.959 0.0 0.0 1.5211 0.0 0.0 960.56916291268 0.0 960.56916291268 0.0 6.120042406207912 0.0 0.0 0 0.0 0.0 0.0 0.0 + AM 1.5211 + + 40 + 1 1.85 47286.9 1.0 2498 3356 5848 DOHH2_400M_050219_2,5856 DOHH2_400M_050219_2,5856,KLMRRYIAM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5857 31.022 189.0 307130.0 25 0 28292.0 -1 LAMIPIDQI 9 102 515.2881198445881 1028.561686755976 2 515.2880737185478 MULTI CID FTMS 0 0 0 5848 210984.9375 1.0 0 0.0 9 Oxidation (M) _LAM(Oxidation (M))IPIDQI_ ENSG00000254656|ENST00000649591|RTL1 18.13498045792455 0.3457906370836843 2 D{I|L}Q{I|L} 4 -1 19.984 0.0 0.0 1.9429 0.0 0.0 541.2979603498062 0.0 541.2979603498062 0.0 10.069602605100496 0.0 0.0 0 0.4204841662593096 0.0 0.3807196863200844 0.0 D{I|L}Q{I|L} 1.9429 - 93 1 1.85 51000.8 1.0 2499 3356 5848 DOHH2_400M_050219_2,5857 DOHH2_400M_050219_2,5857,LAMIPIDQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5858 31.026 194.0 327440.0 25 0 43164.0 + 26439 NTDSPLRY 8 108 483.2381113576644 964.4616697821288 2 483.2381164431572 MULTI CID FTMS 0 0 0 5848 178072.46875 0.0050015343616684 13 -0.8017768859863281 10 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 37.97399986684836 0.2681860861828418 2 {[QS]|[NT]}DSP{I|L}RY 8 0 + 59.373 0.0 0.0 6.1561 6.1561 92.113 0.0 0.0 0.0 49.90926274548464 12.914930551903224 12.914930551903224 23.93575203269588 0 0.4247425010840047 2.0 0.0 0.0 + + {[QS]|[NT]}DSP{I|L}RY;{[QS]|[NT]}DSP[YR]{I|L};{[QS]|[NT]}DSP[HV][VP] 6.1561;3.6743;3.0127 +;-;- + 253 + 1 1.85 54160.5 1.0 2500 3356 5848 DOHH2_400M_050219_2,5858 DOHH2_400M_050219_2,5858,NTDSPLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5859 31.032 320.0 353920.0 25 0 57467.0 + 7610 EIQVKSGL 8 102 437.2551960983446 872.4958392634892 2 437.2550536990166 MULTI CID FTMS 0 0 0 5848 152040.125 1.0 0 0.0 11 Unmodified _EIQVKSGL_ ENST00000464099.5_1_10:126477706-126480371:-|nuORF 39.957323273325 0.2350051964751539 2 {[QN]|[E{I|L}]|[KN]}QVKSG{I|L} 8 0 + 42.633 0.0 0.0 4.8864 4.8864 74.54 0.0 0.0 0.0 21.59379381312206 2.327380920464826 2.327380920464826 2.327380920464826 0 0.2396518287104437 1.6989700043360187 0.5 0.4247425010840047 + + {[QN]|[E{I|L}]|[KN]}QVKSG{I|L};{[QN]|[E{I|L}]|[KN]}QVK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}[AG]VKSG{I|L};{[QN]|[E{I|L}]|[KN]}[AG]VK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}[{I|L}V]{[ET]|[MV]}G{I|L} 4.8864;4.6196;3.8248;3.5502;1.1951 +;-;-;-;- + 93 + 1 1.85 91638.9 1.0 2501 3356 5848 DOHH2_400M_050219_2,5859 DOHH2_400M_050219_2,5859,EIQVKSGL False True EIQVKSGL 31.031752 437.255053699017 749982.0 5848.0 ENST00000464099.5_1_10:126477706-126480371:-|nuORF 3.4433579444885254 2.0 True 8.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5860 31.046 800.0 142720.0 25 0 10313.0 + + 43552 AVPYPQRDMPIQA 13 111 751.3772396768063 1500.7399264204123 2 751.8781616091728 MULTI CID FTMS 0 0 0 5848 90772.796875 0.6793434288568229 -1 0.1156539916992187 12 Unmodified _WYLFFPHHRAQ_ P02666 5.731851221503515 0.8481046878870278 2 {[VA]|[{I|L}G]}PA{M(Oxidation (M))|F}PDR[YG]PN[TP] 14 -1 + 34.195 0.0 0.0 2.2785 2.2785 67.278 0.0 0.0 0.0 1.615116326225504 9.133440155385273 1.615116326225504 2.390690719683093 0 0.7429928190999391 2.0 0.5 0.3807196863200844 {[VA]|[{I|L}G]}PA{M(Oxidation (M))|F}PDR[YG]PN[TP];{[VA]|[{I|L}G]}PA{M(Oxidation (M))|F}[RD]P[YG]PN[TP];{[VA]|[{I|L}G]}PA{M(Oxidation (M))|F}[HK]CQ{[RE]|[WV]}{[ES]|[DT]|[{I|L}C]};{[VA]|[{I|L}G]}PA{M(Oxidation (M))|F}PDRQ[R{M(Oxidation (M))|F}][TP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HV]{M(Oxidation (M))|F}{I|L}P[YG]PN[TP];{[VA]|[{I|L}G]}PA{M(Oxidation (M))|F}[RD]{M(Oxidation (M))|F}{[VA]|[{I|L}G]}PN[TP];{[VA]|[{I|L}G]}PA{M(Oxidation (M))|F}PDRQ{[RE]|[WV]}{[ES]|[DT]|[{I|L}C]};{[VA]|[{I|L}G]}PA{M(Oxidation (M))|F}PDR[YG]PPSQ;{[VA]|[{I|L}G]}PA{M(Oxidation (M))|F}[RD]PQ[R{M(Oxidation (M))|F}][TP];{[VA]|[{I|L}G]}PA{M(Oxidation (M))|F}[HK]CQ[R{M(Oxidation (M))|F}][TP] 2.2785;2.1192;2.0196;1.9821;1.9351;1.9187;1.9137;1.9134;1.8228;1.7548 -;-;-;-;-;-;-;-;-;- 1303 1 1.85 82866.9 0.550000011920929 2502 3356 5848 DOHH2_400M_050219_2,5860 DOHH2_400M_050219_2,5860,WYLFFPHHRAQ False False AVPYPQRDMPIQA 31.0456 751.3772 1297161.875 5848.0 P02666 5.230154037475586 2.0 False 13.0 True unknown PXD020620_cell_line DOHH2_400M_050219_2 5861 31.047 54.0 759650.0 25 0 122960.0 + -1 SFGLWCFIQ 9 63 579.2773450300575 0 579.2761718630791 PEAK CID FTMS 0 0 0 5848 838507.6875 0.3627049266751239 2 -0.0808048248291015 13 Carbamidomethyl (C) _SFGLWC(Carbamidomethyl (C))FIQ_ REV__nc|ENSG00000166578|Q96DY2-3|IQCD 21.74664581756881 0.185237546287679 2 {I|L}S 2 -1 11.114 0.0 0.0 0.961 0.0 0.0 752.3342173412425 201.06746851138908 953.4016858526315 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.0 {I|L}S 0.961 - 33 + 1 1.85 40803.1 1.0 2503 3356 5848 DOHH2_400M_050219_2,5861 DOHH2_400M_050219_2,5861,SFGLWCFIQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5862 31.057 497.0 156680.0 25 0 32399.0 8486 ETDFYDVTW 9 112 588.2462067425895 1174.477860551979 2 588.2476074099541 MULTI CID FTMS 0 0 0 5848 134301.15625 0.3333513804030386 2 -0.0808048248291015 14 Unmodified _ETDFYDVTW_ ENSG00000196639|ENST00000431010|HRH1 4.3292370932331545 0.7635526921153418 2 STNG{I|L}PR 7 8 35.808 0.0 0.0 3.0489 0.0 0.0 431.0862326788684 0.0 431.0862326788684 0.0 19.61050259227452 0.0 0.0 0 0.805462187404089 0.0 0.0 0.2742275032520141 STNG{I|L}PR 3.0489 - 304 + 1 1.85 63720.6 1.0 2504 3356 5848 DOHH2_400M_050219_2,5862 DOHH2_400M_050219_2,5862,ETDFYDVTW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5864 31.062 44.0 904050.0 25 0 115930.0 8624 EVEEDEYKAFY 11 68 711.3076877055686 1420.600822477937 2 711.3077880740166 MULTI CID FTMS 0 0 0 5863 754766.0625 0.0249176542288263 4 -0.1250553131103515 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 2 ANQQA[HD]{M(Oxidation (M))|F}Y 9 9 56.119 0.0 0.0 3.9504 0.0 0.0 328.1511112600097 0.0 328.1511112600097 0.0 44.2932203927169 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 ANQQA[HD]{M(Oxidation (M))|F}Y 3.9504 - 671 + 1 1.85 35241.0 1.0 2505 3357 5863 DOHH2_400M_050219_2,5864 DOHH2_400M_050219_2,5864,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5865 31.065 155.0 394720.0 25 0 34794.0 + 2544 ASEFPGAQHY 10 86 553.748995242515 1105.48343755183 2 553.7487670779228 MULTI CID FTMS 0 0 0 5863 280658.71875 0.1925135832239553 4 -0.1250553131103515 2 Unmodified _ASEFPGAQHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000566509.5_1_15:73052730-73067416:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-5|ADPGK 65.23502041540118 0.0228537820337083 2 {[WT]|[RM]}{M(Oxidation (M))|F}PQQHY 8 5 + 41.235 0.0 0.0 3.73 3.73 70.622 0.0 0.0 0.0 27.232748047850773 2.572522344668613 2.572522344668613 2.552725051033057 0 0.7302046884880937 0.0 0.0 0.4247425010840047 {[WT]|[RM]}{M(Oxidation (M))|F}PQQHY;{[WT]|[RM]}{M(Oxidation (M))|F}PGAQHY;{[WT]|[RM]}{M(Oxidation (M))|F}P[NP]D{[ET]|[MV]};{[WT]|[RM]}{M(Oxidation (M))|F}PYY{[ET]|[MV]};{[WT]|[RM]}{M(Oxidation (M))|F}PQ[AG]HY;{[WT]|[RM]}{M(Oxidation (M))|F}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ET]|[MV]};{[WT]|[RM]}{M(Oxidation (M))|F}PG[PG]D{[ET]|[MV]};{[WT]|[RM]}{M(Oxidation (M))|F}PGA[AG]HY;{[WT]|[RM]}{M(Oxidation (M))|F}PGHH[QP];{[WT]|[RM]}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}T]Y 3.73;3.4991;2.6946;2.6533;2.508;2.4733;2.4686;2.2819;1.6639;1.6468 -;-;-;-;-;-;-;-;-;- 391 + 1 1.85 53882.0 1.0 2506 3357 5863 DOHH2_400M_050219_2,5865 DOHH2_400M_050219_2,5865,ASEFPGAQHY True True ASEFPGAQHY 31.064827 553.748767077923 62997724.0 5863.0 ENST00000567941.5_1_15:73044684-73075795:-|nuORF;;ENSG00000159322|ENST00000456471|ADPGK;;nc|ENSG00000159322|Q9BRR6-2|ADPGK;;nc|ENSG00000159322|Q9BRR6-5|ADPGK;;ENST00000566509.5_1_15:73052730-73067416:-|nuORF 9.087888717651367 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5867 31.071 188.0 441380.0 25 0 51814.0 + 5448 DLQKKPLL 8 110 477.8028472498201 953.59114156644 2 477.8025085330009 MULTI CID FTMS 0 0 0 5866 305969.84375 0.7196437265460635 -3 0.1964588165283203 1 Unmodified _DLQKKPLL_ ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL 50.855029805455786 0.1352255786796883 2 D{I|L}QKKP{I|L}{I|L} 8 0 + 76.042 0.0 0.0 7.9743 7.9743 84.733 0.0 0.0 0.0 42.87691834842093 11.057743964882718 11.057743964882718 3.0102999566398125 0 0.75 2.0 0.0 0.5 + + D{I|L}QKKP{I|L}{I|L};{I|L}DQKKP{I|L}{I|L};D{I|L}QKK{I|L}P{I|L};{I|L}DQKK{I|L}P{I|L};D{I|L}[AG]KKP{I|L}{I|L};{I|L}D[AG]KKP{I|L}{I|L};D{I|L}[AG]KK{I|L}P{I|L};{I|L}D[AG]KK{I|L}P{I|L} 7.9743;7.6586;7.4493;7.1336;7.003;6.6873;6.478;6.1624 +;-;-;-;-;-;-;- + 355 + 1 1.85 72186.5 1.0 2507 3358 5866 DOHH2_400M_050219_2,5867 DOHH2_400M_050219_2,5867,DLQKKPLL False True DLQKKPLL 31.070996 477.802508533001 2910792.0 5866.0 ENSG00000138078|ENST00000409411|PREPL;;nc|ENSG00000138078|Q4J6C6|PREPL;;nc|ENSG00000138078|Q4J6C6-2|PREPL;;nc|ENSG00000138078|Q4J6C6-3|PREPL 4.490317503611247 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5868 31.074 171.0 281010.0 25 0 46026.0 6423 EAAQDSEQL 9 76 495.72239286331774 989.4302327934356 2 495.7230102419853 MULTI CID FTMS 0 0 0 5866 283172.0 0.7999057927401442 -3 0.1964588165283203 2 Unmodified _EAAQDSEQL_ ENST00000443071.6_2_14:101010291-101034310:-|nuORF;ENST00000556188.5_2_14:101010291-101035842:-|nuORF 10.823927491677226 0.5436922275383211 2 S{I|L} 2 7 18.06 0.0 0.0 1.8253 0.0 0.0 771.3030873029312 0.0 771.3030873029312 0.0 4.080306233405295 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 S{I|L} 1.8253 - 59 1 1.85 40792.2 1.0 2508 3358 5866 DOHH2_400M_050219_2,5868 DOHH2_400M_050219_2,5868,EAAQDSEQL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5869 31.077 147.0 400520.0 25 0 47223.0 + 9144 FFTGYVKLD 9 84 363.8581088891056 1088.5524972675166 3 363.8572570681572 MULTI CID FTMS 0 0 0 5866 247666.359375 0.3177672431711499 -4 0.302835464477539 3 Unmodified _FFTGYVKLD_ REV__ENSG00000141200|ENST00000268919|KIF2B 8.155526934196011 0.6299788542272896 2 GT{M(Oxidation (M))|F}E 4 -1 30.165 0.0 0.0 2.7711 0.0 0.0 636.3449448189697 0.0 636.3449448189697 0.0 15.560931587959672 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 GT{M(Oxidation (M))|F}E 2.7711 - 41 1 1.85 53374.2 1.0 2509 3358 5866 DOHH2_400M_050219_2,5869 DOHH2_400M_050219_2,5869,FFTGYVKLD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5870 31.081 171.0 358070.0 25 0 86157.0 + 20853 LMERNNLSY 9 69 570.2793917236108 1138.5442305140216 2 570.2791625857353 MULTI CID FTMS 0 0 0 5866 200374.5625 0.9949302977031288 1 -0.0434303283691406 4 Unmodified _LMERNNLSY_ ENSG00000112972|ENST00000325110|HMGCS1;ENST00000507004.1_1_5:43298575-43313480:-|nuORF;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 24.99096001346401 0.2132109383330889 2 {I|L}MH{[MG]|[TS]}{M(Oxidation (M))|F}[Q{I|L}]Y 9 5 + 61.99 0.0 0.0 5.4447 5.4447 83.287 0.0 0.0 0.0 24.15444131987845 8.534087492996392 8.534087492996392 8.534087492996392 0 0.7887254899964358 1.5228787452803376 0.0 0.0 {I|L}MH{[MG]|[TS]}{M(Oxidation (M))|F}[Q{I|L}]Y;{I|L}MH{[MG]|[TS]}{M(Oxidation (M))|F}R[{M(Oxidation (M))|F}T];{I|L}MH{[MG]|[TS]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{[CT]|[{M(Oxidation (M))|F}G]};{I|L}MH{[MG]|[TS]}{M(Oxidation (M))|F}[VG][{M(Oxidation (M))|F}T];[HM]{I|L}{[MG]|[TS]}{M(Oxidation (M))|F}[Q{I|L}]Y;[R{M(Oxidation (M))|F}]{[ET]|[MV]}[HS]{I|L}SY;[HM]{I|L}{[MG]|[TS]}{M(Oxidation (M))|F}R[{M(Oxidation (M))|F}T];[HM]{I|L}{[MG]|[TS]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{[CT]|[{M(Oxidation (M))|F}G]};[HM]{I|L}{[MG]|[TS]}{M(Oxidation (M))|F}[VG][{M(Oxidation (M))|F}T];[RH][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}R[{M(Oxidation (M))|F}T] 5.4447;4.6951;3.9559;3.8863;2.9102;2.3354;2.1606;1.4214;1.3518;0.88807 -;-;-;-;-;-;-;-;-;- 91 + 1 1.85 51405.6 1.0 2510 3358 5866 DOHH2_400M_050219_2,5870 DOHH2_400M_050219_2,5870,LMERNNLSY False True LMERNNLSY 31.080606 570.279162585735 1073036.625 5866.0 ENST00000507004.1_1_5:43298575-43313480:-|nuORF;;ENSG00000112972|ENST00000325110|HMGCS1;;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 4.344705740610759 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5871 31.094 800.0 251160.0 25 0 25827.0 + 9058 FERLVLNLS 9 181 545.8179831712619 1089.6214134093236 2 545.8182250857353 MULTI CID FTMS 0 0 0 5866 116449.9921875 0.6371237359554164 -2 0.0808048248291015 5 Unmodified _FERLVLNLS_ REV__ENST00000478399.5_1_3:119306776-119306836:+|nuORF 10.073929032068715 0.563993802247229 2 KTT 3 -1 21.159 0.0 0.0 1.9418 0.0 0.0 120.06039797444392 636.3480308729429 756.4084288473869 0.0 0.0 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 KTT 1.9418 - 1572 + 1 1.85 154113.6 0.5799999833106995 2511 3358 5866 DOHH2_400M_050219_2,5871 DOHH2_400M_050219_2,5871,FERLVLNLS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5872 31.108 800.0 67977.0 25 0 3361.9 -1 IVSVFCCCLMR 11 95 722.8349742250584 1443.6553955169168 2 723.3367187380791 MULTI CID FTMS 0 0 0 5866 88330.25 0.7950674096305902 -1 0.0078811645507812 6 3 Carbamidomethyl (C) _IVSVFC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))LMR_ ENST00000244763.8_1_6:7289466-7289577:-|nuORF 8.745405648335112 0.8338865417133445 2 [{I|L}V]S 3 -1 20.942 0.0 0.0 1.4506 0.0 0.0 0.0 1141.4474847105294 1141.4474847105294 3.133096816673479 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}V]S 1.4506 + + 390 1 1.85 42560.6 0.5400000214576721 2512 3358 5866 DOHH2_400M_050219_2,5872 DOHH2_400M_050219_2,5872,IVSVFCCCLMR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5874 31.126 800.0 113400.0 25 0 10308.0 + 41097 VNKIKEIAV 9 132 507.3211554138125 1012.627757894425 2 507.3215209841728 MULTI CID FTMS 0 0 0 5873 83120.0078125 0.1436776963387211 4 -0.1876354217529297 1 Unmodified _VNKIKEIAV_ ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 24.99096001346401 0.2132109383330889 2 {[QN]|[E{I|L}]|[KN]}KRRNVV 8 6 + 27.075 0.0 0.0 2.6737 2.6737 67.417 0.0 0.0 0.0 2.130340054644975 10.749708597476308 2.130340054644975 1.972805581256196 0 0.3252574989159953 1.0457574905606752 0.0 0.0 {[QN]|[E{I|L}]|[KN]}KRRNVV;{[QN]|[E{I|L}]|[KN]}K[{I|L}A]KNVV;{[QN]|[E{I|L}]|[KN]}KRRGGVV;{[QN]|[E{I|L}]|[KN]}K[{I|L}A]KGGVV;{[QN]|[E{I|L}]|[KN]}KRRAAAV;{[QN]|[E{I|L}]|[KN]}K[{I|L}A]KAAAV;[KG]GRRKNVV;{[TV]|[{I|L}S]}[{I|L}A]{[VA]|[{I|L}G]}KNVV;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}[{I|L}A]KNVV;[{I|L}T]{[VA]|[{I|L}G]}{[VA]|[{I|L}G]}KNVV 2.6737;2.4789;1.7591;1.5696;1.4618;1.2723;1.2053;1.0984;0.97503;0.9421 -;-;-;-;-;-;-;-;-;- 562 1 1.866 72982.0 0.6000000238418579 2513 3359 5873 DOHH2_400M_050219_2,5874 DOHH2_400M_050219_2,5874,VNKIKEIAV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5875 31.13 232.0 304320.0 25 0 24898.0 + 38024 TPAPRPAVL 9 100 461.2795938762152 920.5446348192304 2 461.2790099978447 MULTI CID FTMS 0 0 0 5873 196350.3125 0.723711452538129 -2 0.0513114929199218 2 Unmodified _TPAPRPAVL_ ENST00000262518.8_1_16:30710550-30715400:+|nuORF;ENST00000411466.6_3_16:30709553-30715400:+|nuORF 49.93300154707207 0.0405168250806675 2 TPA 3 6 56.649 0.0 0.0 6.1539 0.0 0.0 0.0 648.3839342910217 648.3839342910217 33.12788734004606 0.0 0.0 0.0 0 1.0451140161145327 2.0 0.0 0.0 + TPA 6.1539 + + 118 + 1 1.866 60678.0 1.0 2514 3359 5873 DOHH2_400M_050219_2,5875 DOHH2_400M_050219_2,5875,TPAPRPAVL True True TPAPRPAVL 31.130306 461.279009997845 1598498.75 5873.0 ENST00000262518.8_1_16:30710550-30715400:+|nuORF;;ENST00000411466.6_3_16:30709553-30715400:+|nuORF 5.522788842519124 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5876 31.136 298.0 221400.0 25 0 16014.0 + 36810 TEIEHKVAF 9 119 537.2856231664389 1072.5566933996777 2 537.2857543826103 MULTI CID FTMS 0 0 0 5873 142830.546875 1.0 0 0.0 3 Unmodified _TEIEHKVAF_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 49.52724829834842 0.0414064571532091 2 [HK]VVHE{I|L}[DP] 9 8 + 40.934 0.0 0.0 3.8165 3.8165 83.495 0.0 0.0 0.0 3.9524249272868417 24.4800716418942 3.9524249272868417 25.471062485323515 0 1.2059771852360797 0.0 0.0 0.0 [HK]VVHE{I|L}[DP];{[ET]|[MV]}{I|L}[HV]RRY;[HK]VE[HV]{I|L}[DP];[HK]VA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[DP];[HK]VVH{[MS]|[{M(Oxidation (M))|F}A]}[HV];{[QN]|[E{I|L}]|[KN]}HKV[HV][DP];{[ET]|[MV]}{I|L}[HV][YK][PS];{[ET]|[MV]}{I|L}EH[{M(Oxidation (M))|F}V][KA];{[QN]|[E{I|L}]|[KN]}[Y{I|L}]NP{I|L}[DP];{[ET]|[MV]}[HV]{I|L}RRY 3.8165;1.4417;1.394;1.394;1.2471;1.1561;1.1144;1.0775;0.8958;0.80603 -;-;-;-;-;-;-;-;-;- 362 1 1.866 53450.7 1.0 2515 3359 5873 DOHH2_400M_050219_2,5876 DOHH2_400M_050219_2,5876,TEIEHKVAF True True TEIEHKVAF 31.135773 537.28575438261 868421.375 5873.0 ENST00000394768.6_2_14:64542710-64692241:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2;;nc|ENSG00000054654|Q8WXH0-7|SYNE2 6.8211038907368975 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5878 31.141 104.0 623470.0 25 0 40333.0 + 789 AESLIAKKI 9 104 486.808184613647 971.601816294094 2 486.8081542849541 MULTI CID FTMS 0 0 0 5877 513546.03125 0.2594828927803904 4 -0.2219409942626953 1 Unmodified _AESLIAKKI_ ENSG00000166226|ENST00000299300|CCT2;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;nc|ENSG00000166226|P78371-2|CCT2 56.17704186161178 0.0281986971544335 2 {[CP]|[EA]}S{I|L}{I|L}AKK{I|L} 9 0 + 58.784 0.0 0.0 6.0503 6.0503 93.068 0.0 0.0 0.0 28.4421859761036 11.706962271689749 11.706962271689749 58.78449900342946 0 1.1989700043360187 0.8538719643217619 0.0 0.2215141619232908 + + {[CP]|[EA]}S{I|L}{I|L}AKK{I|L} 6.0503 + + 296 + 1 1.866 55893.2 1.0 2516 3360 5877 DOHH2_400M_050219_2,5878 DOHH2_400M_050219_2,5878,AESLIAKKI True True AESLIAKKI 31.140564 486.808154284954 19127328.0 5877.0 nc|ENSG00000166226|P78371-2|CCT2;;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;;ENSG00000166226|ENST00000299300|CCT2;;ENST00000551620.5_1_12:69979244-69983508:+|nuORF 3.1093451182047525 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5879 31.154 800.0 183780.0 25 0 10510.0 -1 SEKFYCSCY 9 150 593.730749845122 1185.446946757044 2 593.7302734255791 MULTI CID FTMS 0 0 0 5877 175714.96875 1.0 0 0.0 2 Carbamidomethyl (C) _SEKFYC(Carbamidomethyl (C))SCY_ ENSG00000106304|ENST00000682466|SPAM1;nc|ENSG00000106304|P38567-2|SPAM1 11.640296217721598 0.521594087909532 2 {M(Oxidation (M))|F}GSAKYY 7 -1 51.533 0.0 0.0 4.3472 0.0 0.0 351.0555091200259 0.0 351.0555091200259 0.0 26.95841340981232 0.0 0.0 0 1.9361818737241727 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}GSAKYY 4.3472 - 550 + 1 1.866 108573.9 0.6100000143051147 2517 3360 5877 DOHH2_400M_050219_2,5879 DOHH2_400M_050219_2,5879,SEKFYCSCY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5880 31.156 44.0 1123800.0 25 0 129520.0 + 25846 NLDQATRVAY 10 81 575.7956341247176 1149.576715316235 2 575.7941161990166 MULTI CID FTMS 0 0 0 5877 680098.6875 0.3659018164254508 -2 0.0709400177001953 3 Unmodified _NLDQATRVAY_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 47.7319792270244 0.0934623409360514 2 {[QV]|[N{I|L}]|[RA]|[KV]}DQATRVAY 10 0 + 72.369 0.0 0.0 6.2953 6.2953 87.491 0.0 0.0 0.0 9.942190502882156 9.942190502882156 9.942190502882156 9.164539485499256 0 1.6677353201839438 2.0 0.0 0.3807196863200844 + + {[QV]|[N{I|L}]|[RA]|[KV]}DQATRVAY;{[QV]|[N{I|L}]|[RA]|[KV]}D[AG]ATRVAY;{[QV]|[N{I|L}]|[RA]|[KV]}D[RK]DGVAY;{[QV]|[N{I|L}]|[RA]|[KV]}DQTAVGVAY;{[QV]|[N{I|L}]|[RA]|[KV]}DQTARVAY;{[QV]|[N{I|L}]|[RA]|[KV]}DQTAVRAY 6.2953;5.498;5.4304;4.2071;3.897;3.897 +;-;-;-;-;- + 129 + 1 1.866 42119.2 1.0 2518 3360 5877 DOHH2_400M_050219_2,5880 DOHH2_400M_050219_2,5880,NLDQATRVAY True True NLDQATRVAY 31.155631 575.794116199017 15938507.0 5877.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 7.4555238087972 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5881 31.161 312.0 304940.0 25 0 27608.0 1513 ALIDRTGRML 10 110 382.55213503065335 1144.63457569216 3 382.5519897341728 MULTI CID FTMS 0 0 0 5877 107124.640625 0.3776555509823484 -2 0.0709400177001953 4 Unmodified _ALIDRTGRML_ ENSG00000092148|ENST00000399332|HECTD1 6.1918466704503565 0.6979955778746556 2 {I|L} 1 9 15.485 0.0 0.0 1.3528 0.0 0.0 1013.5397098247756 0.0 1013.5397098247756 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3528 + + 22 + 1 1.866 78839.6 1.0 2519 3360 5877 DOHH2_400M_050219_2,5881 DOHH2_400M_050219_2,5881,ALIDRTGRML False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5882 31.168 381.0 313750.0 25 0 41794.0 + 7375 EGFDRSTSL 9 142 506.24060096613664 1010.4666489990732 2 506.2401000857353 MULTI CID FTMS 0 0 0 5877 89378.0078125 0.1857027974795394 -2 0.0709400177001953 5 Unmodified _EGFDRSTSL_ ENSG00000168209|ENST00000307365|DDIT4;ENST00000471240.1_1_10:74033815-74034322:+|nuORF 36.506200033944 0.094635877243972 2 WTMS{[WT]|[RM]}S{I|L} 8 6 + 36.525 0.0 0.0 3.6147 3.6147 68.085 0.0 0.0 0.0 0.4453125937239832 9.43742728819068 0.4453125937239832 0.8192399157733377 0 0.7619229975844686 0.0 0.7302046884880937 0.0 WTMS{[WT]|[RM]}S{I|L};EG{M(Oxidation (M))|F}D[TA]KM{I|L};{[{M(Oxidation (M))|F}D]|MM}KD{[WT]|[RM]}S{I|L};[{M(Oxidation (M))|F}V][SG]D{[WT]|[RM]}S{I|L};{[{M(Oxidation (M))|F}D]|MM}RS{[WT]|[RM]}S{I|L};[HV]TSY[YE]{I|L};[{M(Oxidation (M))|F}V][SG]DDKM{I|L};[{M(Oxidation (M))|F}V][SG]N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L};EG{M(Oxidation (M))|F}D[TA]K{I|L}M;{[{M(Oxidation (M))|F}D]|MM}KN[C(Carbamidomethyl (C))K]S{I|L} 3.6147;3.5336;3.5323;2.9141;2.9125;2.6847;2.6571;2.6571;2.503;2.3854 -;-;-;-;-;-;-;-;-;- 1412 + 1 1.866 96812.9 1.0 2520 3360 5877 DOHH2_400M_050219_2,5882 DOHH2_400M_050219_2,5882,EGFDRSTSL True True EGFDRSTSL 31.16815 506.240100085735 6020211.0 5877.0 ENST00000471240.1_1_10:74033815-74034322:+|nuORF;;ENSG00000168209|ENST00000307365|DDIT4 4.043890953063965 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5883 31.182 800.0 46481.0 25 0 13137.0 -1 0 30 1192.8107108380275 3575.410303114283 3 1193.143847644329 MULTI CID FTMS 0 0 0 5877 107917.21875 0.9027811027358116 -2 0.0709400177001953 6 2 {M(Oxidation (M))|F}G{M(Oxidation (M))|F} 3 -1 10.177 0.0 0.0 0.28465 0.0 0.0 1708.6180190340085 1512.6458848773264 3221.263903911334 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G{M(Oxidation (M))|F} 0.28465 - 7 + 1 1.866 41661.0 0.4199999868869781 2521 3360 5877 DOHH2_400M_050219_2,5883 DOHH2_400M_050219_2,5883, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5885 31.187 47.0 1034000.0 25 0 131230.0 + 4291 DAREKISL 8 63 466.2641386938826 930.5137244545654 2 466.2639648318291 MULTI CID FTMS 0 0 0 5884 1136982.875 0.4816774978658866 4 -0.2694759368896484 1 Unmodified _DAREKISL_ ENSG00000100227|ENST00000252115|POLDIP3;ENST00000491021.1_1_22:42993722-42998991:-|nuORF;nc|ENSG00000100227|Q9BY77-2|POLDIP3 31.26834338654808 0.3863233259196171 2 D[HK]{I|L}S{I|L} 6 3 32.21 0.0 0.0 3.4615 0.0 0.0 219.13035781074376 0.0 219.13035781074376 0.0 26.725534297491294 0.0 0.0 0 0.8252574989159953 0.0 0.3807196863200844 0.0 D[HK]{I|L}S{I|L} 3.4615 - 44 1 1.869 47036.2 1.0 2522 3361 5884 DOHH2_400M_050219_2,5885 DOHH2_400M_050219_2,5885,DAREKISL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5886 31.189 84.0 505990.0 25 0 65899.0 + 4913 DGKYSQVL 8 74 455.2376770066194 908.4608010800388 2 455.2373535037041 MULTI CID FTMS 0 0 0 5884 461098.03125 0.299018107014699 4 -0.2694759368896484 2 Unmodified _DGKYSQVL_ ENSG00000231500|ENST00000439602|RPS18;ENST00000407538.2_1_6:141243712-141243922:-|nuORF;ENST00000445477.1_1_22:31955550-31955922:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 39.957323273325 0.2350051964751539 2 V{I|L} 2 6 25.969 0.0 0.0 2.8586 0.0 0.0 678.2971028151936 0.0 678.2971028151936 0.0 9.956086281042465 0.0 0.0 0 0.5 0.0 0.0 0.0 + V{I|L} 2.8586 + + 53 + 1 1.869 39925.0 1.0 2523 3361 5884 DOHH2_400M_050219_2,5886 DOHH2_400M_050219_2,5886,DGKYSQVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5887 31.194 280.0 291760.0 25 0 73752.0 8819 EYGWEFLEHTY 11 85 491.8832563620584 1472.6279396863754 3 491.8832275271416 MULTI CID FTMS 0 0 0 5884 133483.34375 0.5409101695949784 -1 0.046234130859375 3 Unmodified _EYGWEFLEHTY_ ENSG00000143315|ENST00000368090|PIGM 4.406150317652783 0.8543594311449257 2 [Y{M(Oxidation (M))|F}]E 3 8 28.684 0.0 0.0 1.9478 0.0 0.0 0.0 1030.4404295709562 1030.4404295709562 7.715299873086607 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 [Y{M(Oxidation (M))|F}]E 1.9478 - 37 + 1 1.869 67217.6 1.0 2524 3361 5884 DOHH2_400M_050219_2,5887 DOHH2_400M_050219_2,5887,EYGWEFLEHTY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5888 31.208 800.0 134120.0 25 0 8992.4 + 740 AEQESGLYRY 10 115 608.2862257956457 1214.5578986580913 2 608.2860595583916 MULTI CID FTMS 0 0 0 5884 110384.3828125 0.7069861183706796 -1 0.046234130859375 4 Unmodified _AEQESGLYRY_ ENSG00000112159|ENST00000369393|MDN1 79.59630418116434 0.0173986606250113 2 [AG]ESR{I|L}GSEQ 10 7 78.819 0.0 0.0 6.4895 0.0 0.0 0.0 197.0575097437469 197.0575097437469 47.96784786977047 0.0 0.0 0.0 0 0.8494850021680094 2.0 1.305462187404089 0.6549471895720985 [AG]ESR{I|L}GSEQ 6.4895 - 1194 1 1.869 81520.2 0.6100000143051147 2525 3361 5884 DOHH2_400M_050219_2,5888 DOHH2_400M_050219_2,5888,AEQESGLYRY True True AEQESGLYRY 31.208112 608.286059558392 783468.25 5884.0 ENSG00000112159|ENST00000369393|MDN1 8.261283079783121 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5889 31.215 361.0 153610.0 25 0 18778.0 + 9483 FLDESRSTQY 10 82 623.2908152908859 1244.5670776485715 2 623.2916137576103 MULTI CID FTMS 0 0 0 5884 110343.515625 0.0760544778671306 -2 0.0737438201904296 5 Unmodified _FLDESRSTQY_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 34.93206674587334 0.2110832994570416 2 CED{I|L}E 5 9 44.821 0.0 0.0 3.6013 0.0 0.0 637.3145619123062 0.0 637.3145619123062 0.0 25.356668758921828 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 CED{I|L}E 3.6013 - 204 1 1.869 47026.7 1.0 2526 3361 5884 DOHH2_400M_050219_2,5889 DOHH2_400M_050219_2,5889,FLDESRSTQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5890 31.217 118.0 496300.0 25 0 70642.0 -1 0 79 490.2858875287659 489.2786110621659 1 490.2853271365166 MULTI CID FTMS 0 0 0 5884 476443.25 0.1279930158262805 6 -0.3718509674072265 6 2 {M(Oxidation (M))|F} 1 -1 10.485 0.0 0.0 2.1429 0.0 0.0 324.19923286568 0.0 324.19923286568 0.0 0.303489201768059 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.1429 - 12 + 1 1.869 51065.9 1.0 2527 3361 5884 DOHH2_400M_050219_2,5890 DOHH2_400M_050219_2,5890, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5891 31.227 553.0 194300.0 25 0 37720.0 + -1 VELGQVKQY 9 134 532.2944047640158 531.2871282974157 1 532.2933837771416 MULTI CID FTMS 0 0 0 5884 121756.296875 1.0 0 0.0 7 nc|ENSG00000107890|Q9UPS8-2|ANKRD26;ENSG00000107890|ENST00000376087|ANKRD26 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[TA] 5 -1 + 25.686 0.0 0.0 4.8347 4.8347 85.702 0.0 0.0 0.0 10.2937748157192 1.7339374311232802 1.7339374311232802 15.629485835064486 0 0.0 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[TA];{[QN]|[E{I|L}]|[KN]}V[TA] 4.8347;1.8929 -;- 75 1 1.869 89570.0 1.0 2528 3361 5884 DOHH2_400M_050219_2,5891 DOHH2_400M_050219_2,5891, False False VELGQVKQY 31.226801 532.293383777142 1005570.875 5884.0 nc|ENSG00000107890|Q9UPS8-2|ANKRD26;;ENSG00000107890|ENST00000376087|ANKRD26 2.2077434131254754 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5892 31.236 503.0 159730.0 25 0 10106.0 + 7158 EENQIVSSY 9 126 534.7467702996931 1067.4789876661862 2 534.7457153201103 MULTI CID FTMS 0 0 0 5884 110324.421875 1.0 0 0.0 8 Unmodified _EENQIVSSY_ ENSG00000105483|ENST00000651546|CARD8;ENST00000377461.8_1_19:48718626-48735356:-|nuORF;ENST00000517510.5_1_19:48707456-48744240:-|nuORF;ENST00000522051.5_1_19:48714969-48735770:-|nuORF;ENST00000522773.5_1_19:48714969-48736545:-|nuORF;nc|ENSG00000105483|Q9Y2G2-1|CARD8;nc|ENSG00000105483|Q9Y2G2-2|CARD8;nc|ENSG00000105483|Q9Y2G2-3|CARD8;nc|ENSG00000105483|Q9Y2G2-4|CARD8;nc|ENSG00000105483|Q9Y2G2-7|CARD8 32.30548876998284 0.1201446275138228 2 {I|L}[MT]SY 5 6 29.749 0.0 0.0 2.7869 0.0 0.0 454.2092865937237 0.0 454.2092865937237 0.0 12.028937514676482 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 {I|L}[MT]SY 2.7869 - 289 + 1 1.869 65753.3 1.0 2529 3361 5884 DOHH2_400M_050219_2,5892 DOHH2_400M_050219_2,5892,EENQIVSSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5894 31.249 617.0 148450.0 25 0 8950.9 + 5950 DQIEERTY 8 141 527.2446082914078 1052.4746636496154 2 526.7426025271416 MULTI CID FTMS 0 0 0 5893 37859.93359375 0.18626126650719 6 -0.4527091979980469 1 Unmodified _DQIEERTY_ REV__ENSG00000072518|ENST00000402010|MARK2;REV__nc|ENSG00000072518|Q7KZI7-10|MARK2;REV__nc|ENSG00000072518|Q7KZI7-11|MARK2;REV__nc|ENSG00000072518|Q7KZI7-12|MARK2;REV__nc|ENSG00000072518|Q7KZI7-13|MARK2;REV__nc|ENSG00000072518|Q7KZI7-14|MARK2;REV__nc|ENSG00000072518|Q7KZI7-15|MARK2;REV__nc|ENSG00000072518|Q7KZI7-16|MARK2;REV__nc|ENSG00000072518|Q7KZI7-2|MARK2;REV__nc|ENSG00000072518|Q7KZI7-3|MARK2;REV__nc|ENSG00000072518|Q7KZI7-4|MARK2;REV__nc|ENSG00000072518|Q7KZI7-5|MARK2;REV__nc|ENSG00000072518|Q7KZI7-6|MARK2;REV__nc|ENSG00000072518|Q7KZI7-7|MARK2;REV__nc|ENSG00000072518|Q7KZI7-8|MARK2;REV__nc|ENSG00000072518|Q7KZI7-9|MARK2 12.531546534597751 0.7257836412119636 2 {[QN]|[E{I|L}]|[KN]}{I|L}[NG]A{I|L} 7 -1 25.071 0.0 0.0 2.3821 0.0 0.0 0.0 339.04444069565176 339.04444069565176 -1.4612803567823818 0.0 -1.4612803567823818 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}[NG]A{I|L} 2.3821 - 690 1 1.869 75139.6 1.0 2530 3362 5893 DOHH2_400M_050219_2,5894 DOHH2_400M_050219_2,5894,DQIEERTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5895 31.252 133.0 535400.0 25 0 32406.0 + 8884 FAEHNDLQY 9 91 568.7539151085082 1135.4932772838165 2 568.7543212771416 MULTI CID FTMS 0 0 0 5893 307881.03125 0.1322830090932448 -3 0.1274242401123047 2 Unmodified _FAEHNDLQY_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 56.17704186161178 0.0281986971544335 2 [HN]DEA{M(Oxidation (M))|F}{I|L}QY 9 6 + 56.916 0.0 0.0 5.0125 5.0125 78.379 0.0 0.0 0.0 7.447274948966935 31.99523678530852 7.447274948966935 4.964329412872687 0 0.8494850021680094 0.0 0.6989700043360187 0.3807196863200844 [HN]DEA{M(Oxidation (M))|F}{I|L}QY;[HN]DE{I|L}A{M(Oxidation (M))|F}QY;[HN]DEA{I|L}{M(Oxidation (M))|F}QY;[{M(Oxidation (M))|F}V][HT]ND{I|L}QY;[HN]D{I|L}EA{M(Oxidation (M))|F}QY;[HN]DEA{M(Oxidation (M))|F}{I|L}[AG]Y;{[YC]|[HE]}[DN]A{M(Oxidation (M))|F}{I|L}QY;[HN]DE{I|L}A{M(Oxidation (M))|F}[AG]Y;[HN]DEA{I|L}{M(Oxidation (M))|F}[AG]Y;[{M(Oxidation (M))|F}V][HT]ND{I|L}[AG]Y 5.0125;4.5753;4.3907;4.2821;4.2248;4.2015;3.8565;3.7643;3.5798;3.4712 -;-;-;-;-;-;-;-;-;- 363 1 1.869 56407.5 1.0 2531 3362 5893 DOHH2_400M_050219_2,5895 DOHH2_400M_050219_2,5895,FAEHNDLQY True True FAEHNDLQY 31.251743 568.754321277142 26227176.0 5893.0 ENSG00000180574|ENST00000538173|EIF2S3B;;ENSG00000130741|ENST00000253039|EIF2S3;;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 10.082750956217447 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5896 31.255 169.0 386370.0 25 0 53215.0 + 45347 YSQADALKY 9 98 529.7602816806349 1057.5060104280697 2 529.7613403201103 MULTI CID FTMS 0 0 0 5893 207848.3125 0.7154453197070041 -2 0.09991455078125 3 Unmodified _YSQADALKY_ ENSG00000106462|ENST00000320356|EZH2;ENSG00000108799|ENST00000428826|EZH1;ENST00000431167.1_1_21:36972032-36972302:-|nuORF;ENST00000492143.5_1_7:148504740-148513906:-|nuORF;ENST00000586714.1_1_17:40854552-40854989:-|nuORF;nc|ENSG00000106462|Q15910-3|EZH2;nc|ENSG00000106462|Q15910-4|EZH2;nc|ENSG00000106462|Q15910-5|EZH2;nc|ENSG00000106462|Q15910|EZH2;nc|ENSG00000108799|Q92800-2|EZH1;nc|ENSG00000108799|Q92800-3|EZH1;nc|ENSG00000108799|Q92800-4|EZH1;nc|ENSG00000108799|Q92800-5|EZH1 43.77239144664712 0.0547478964384323 2 YSQADA{I|L}KY 9 0 + 90.94 0.0 0.0 8.5994 8.5994 93.12 0.0 0.0 0.0 34.43697499232712 9.542425094393252 9.542425094393252 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.6549471895720985 + + YSQADA{I|L}KY;YS[AG]ADA{I|L}KY;YSQADA{I|L}YK;YS[AG]ADA{I|L}YK;YSQADA[YK]{I|L};YS[AG]ADA[YK]{I|L} 8.5994;7.7287;7.6971;6.8263;5.991;5.1202 +;-;-;-;-;- + 293 + 1 1.869 57507.7 1.0 2532 3362 5893 DOHH2_400M_050219_2,5896 DOHH2_400M_050219_2,5896,YSQADALKY True True YSQADALKY 31.255059 529.76134032011 2046634.875 5893.0 nc|ENSG00000106462|Q15910-4|EZH2;;nc|ENSG00000108799|Q92800-4|EZH1;;nc|ENSG00000106462|Q15910-3|EZH2;;ENSG00000106462|ENST00000320356|EZH2;;ENST00000586714.1_1_17:40854552-40854989:-|nuORF;;nc|ENSG00000106462|Q15910-5|EZH2;;nc|ENSG00000108799|Q92800-3|EZH1;;nc|ENSG00000108799|Q92800-2|EZH1;;ENSG00000108799|ENST00000428826|EZH1;;ENST00000431167.1_1_21:36972032-36972302:-|nuORF;;nc|ENSG00000108799|Q92800-5|EZH1;;ENST00000492143.5_1_7:148504740-148513906:-|nuORF;;nc|ENSG00000106462|Q15910|EZH2 9.95657475789388 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5897 31.269 800.0 250120.0 25 0 16294.0 + 31842 RTEPFQDGY 9 167 556.7537014530449 1111.4928499728896 2 556.7539550662041 MULTI CID FTMS 0 0 0 5893 90158.5 0.059564114699495 -3 0.1274242401123047 4 Unmodified _RTEPFQDGY_ ENSG00000164543|ENST00000319357|STK17A 107.09958533191995 0.0072323465566536 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AAP{M(Oxidation (M))|F}QDGY 10 4 + 100.2 0.0 0.0 9.0149 9.0149 91.591 0.0 0.0 0.0 8.648801895504974 16.53212513775344 8.648801895504974 8.648801895504974 0 2.0356668758921828 1.154901959985743 0.7302046884880937 1.1307196863200843 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AAP{M(Oxidation (M))|F}QDGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}QDGY;{[ET]|[MV]}RP{M(Oxidation (M))|F}QDGY;[VG]{[ET]|[MV]}P{M(Oxidation (M))|F}QDGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}[AG]DGY;{[TV]|[{I|L}S]}WP{M(Oxidation (M))|F}QDGY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AAP{M(Oxidation (M))|F}[AG]DGY;{[ET]|[MV]}RP{M(Oxidation (M))|F}[AG]DGY;[VP]{[WT]|[RM]}{M(Oxidation (M))|F}QDGY;[VP]A{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}QDGY 9.0149;8.2368;7.7864;7.6277;7.4083;7.2488;7.1731;6.9579;6.2583;5.8751 -;+;-;-;-;-;-;-;-;- + 1519 1 1.869 151820.3 0.5400000214576721 2533 3362 5893 DOHH2_400M_050219_2,5897 DOHH2_400M_050219_2,5897,RTEPFQDGY True True RTEPFQDGY 31.268909 556.753955066204 24418210.5 5893.0 ENSG00000164543|ENST00000319357|STK17A 7.777319272359212 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5898 31.283 800.0 118950.0 25 0 49369.0 -1 0 88 642.4058644287961 641.3985879621961 1 642.4055663943291 MULTI CID FTMS 0 0 0 5893 135448.578125 0.2563101908615564 -5 0.1787357330322265 5 2 Y 1 -1 12.764 0.0 0.0 1.9901 0.0 0.0 460.3246724121945 0.0 460.3246724121945 0.0 3.1601160735270284 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.9901 - 8 + 1 1.869 74002.0 0.6600000262260437 2534 3362 5893 DOHH2_400M_050219_2,5898 DOHH2_400M_050219_2,5898, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5899 31.292 534.0 199760.0 25 0 11142.0 + 33409 SGYGRSVSL 9 135 463.2411094063447 924.4676658794892 2 463.2407409548759 MULTI CID FTMS 0 0 0 5893 129705.96875 0.3288204726323266 -2 0.09991455078125 6 Unmodified _SGYGRSVSL_ ENST00000572621.5_2_17:1587830-1587986:-|nuORF 23.78978130925829 0.2284941198415988 2 [SG]Y{[QV]|[N{I|L}]|[RA]|[KV]}[TA]S{I|L} 9 3 + 38.719 0.0 0.0 4.1882 4.1882 77.241 0.0 0.0 0.0 23.62599004077162 11.239306668753464 11.239306668753464 6.881507111564272 0 1.1549471895720984 0.8538719643217619 0.4247425010840047 0.0 [SG]Y{[QV]|[N{I|L}]|[RA]|[KV]}[TA]S{I|L};{[TV]|[{I|L}S]}VY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L};[{M(Oxidation (M))|F}V][KS]{[QG]|[NA]}{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))K]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};[SG]Y{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};[{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))K][TA]S{I|L};[{M(Oxidation (M))|F}V][KS][MN]S{I|L};{[TV]|[{I|L}S]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YV]S{I|L};[{M(Oxidation (M))|F}V][KS]{[QG]|[NA]}YP;[{M(Oxidation (M))|F}V][KS]{[QG]|[NA]}PY 4.1882;3.4438;2.9618;2.7846;2.5686;2.2334;2.2334;2.0801;1.4702;1.3619 -;-;-;-;-;-;-;-;-;- 301 + 1 1.869 86258.9 1.0 2535 3362 5893 DOHH2_400M_050219_2,5899 DOHH2_400M_050219_2,5899,SGYGRSVSL False True SGYGRSVSL 31.292128 463.240740954876 2167293.25 5893.0 ENST00000572621.5_2_17:1587830-1587986:-|nuORF 2.843770146369934 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5900 31.296 198.0 319030.0 25 0 75079.0 + 31440 RPQPASVL 8 87 434.2566156766587 0 434.2566711306572 PEAK CID FTMS 0 0 0 5893 127498.3359375 1.0 0 0.0 7 Unmodified _RPQPASVL_ REV__ENST00000592323.5_1_17:42422670-42426790:+|nuORF 5.760428011301431 0.5786759180849727 2 {I|L} 1 -1 4.6041 0.0 0.0 0.53134 0.0 0.0 432.17428984765496 318.2191561334594 750.3934459811144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.53134 + + 10 + 1 1.869 56176.4 1.0 2536 3362 5893 DOHH2_400M_050219_2,5900 DOHH2_400M_050219_2,5900,RPQPASVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5902 31.301 65.0 728950.0 25 0 113230.0 + 45293 YSDSLVQKGY 10 80 580.2843865531273 1158.5542201730543 2 580.2850829958916 MULTI CID FTMS 0 0 0 5901 605419.625 0.3801596411519832 1 -0.0618152618408203 1 Unmodified _YSDSLVQKGY_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 70.33199760932243 0.018925923965799 2 YSDS{I|L}VQKGY 10 0 + 81.001 0.0 0.0 6.9916 6.9916 89.424 0.0 0.0 0.0 67.90250823821872 10.457574905606762 10.457574905606762 9.164539485499247 0 1.337180496500464 2.0 0.0 0.3807196863200844 + + YSDS{I|L}VQKGY;YSDS{I|L}V[AG]KGY;YSD{[NV]|[RG]}[{I|L}T]KGY;YSDKK[NG]KGY;YSDKK{[YD]|[{M(Oxidation (M))|F}M]}{I|L}Q;YSDKK{[WT]|[RM]}[MT];[KQ][HT]V{I|L}SD[MT];[KQ][HT]V[WE][MT];[KQ][WH][{I|L}T]D[MT];{[QV]|[N{I|L}]|[RA]|[KV]}[Y{M(Oxidation (M))|F}]KKD[MT] 6.9916;6.2006;4.4682;4.3162;3.7129;3.1486;2.6385;1.6807;0.6511;0.1325 +;-;-;-;-;-;-;-;-;- + 204 + 1 1.869 40759.2 1.0 2537 3363 5901 DOHH2_400M_050219_2,5902 DOHH2_400M_050219_2,5902,YSDSLVQKGY True True YSDSLVQKGY 31.30069 580.285082995892 6795320.5 5901.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-2|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 11.487481435139976 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5903 31.302 79.0 969700.0 25 0 123810.0 + 13883 HVPEHAVVL 9 85 500.7825017365613 999.5504505399224 2 500.7824584841728 MULTI CID FTMS 0 0 0 5901 594179.9375 0.4280460204630844 2 -0.1555843353271484 2 Unmodified _HVPEHAVVL_ ENSG00000169710|ENST00000306749|FASN 32.30548876998284 0.1201446275138228 2 [HV][EP]HAVV{I|L} 9 0 + 60.454 0.0 0.0 6.0481 6.0481 79.982 0.0 0.0 0.0 15.258396522653683 39.72865638833312 15.258396522653683 3.0102999566398125 0 0.9361818737241736 2.0 0.0 0.0 + + [HV][EP]HAVV{I|L};[HV][EP]AHVV{I|L};[HV][EP]AVHV{I|L} 6.0481;5.747;5.2696 +;-;- + 236 1 1.869 63644.7 1.0 2538 3363 5901 DOHH2_400M_050219_2,5903 DOHH2_400M_050219_2,5903,HVPEHAVVL True True HVPEHAVVL 31.302484 500.782458484173 61665432.0 5901.0 ENSG00000169710|ENST00000306749|FASN 7.260585943857829 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5904 31.304 23.0 1969300.0 25 0 160910.0 + 26440 NTDSPLRY 8 68 483.2380504224976 964.4615479117952 2 483.2381164431572 MULTI CID FTMS 0 0 0 5901 2302235.25 1.0 0 0.0 3 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 46.020951573049366 0.1579632664462935 2 {[QS]|[NT]}DSP{I|L}RY 8 0 + 65.666 0.0 0.0 6.8086 6.8086 95.596 0.0 0.0 0.0 57.4396447873054 12.184290373512034 12.184290373512034 65.66646988486582 0 0.4247425010840047 2.0 0.0 0.3494850021680094 + + {[QS]|[NT]}DSP{I|L}RY 6.8086 + + 115 + 1 1.869 41740.3 1.0 2539 3363 5901 DOHH2_400M_050219_2,5904 DOHH2_400M_050219_2,5904,NTDSPLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5905 31.307 192.0 341680.0 25 0 45931.0 -1 MTTSSGNQAFY 11 86 611.757661625695 1221.50077031819 2 611.7596313357353 MULTI CID FTMS 0 0 0 5901 273553.125 1.0 0 0.0 4 Oxidation (M) _M(Oxidation (M))TTSSGNQAFY_ ENSG00000283039|ENST00000634670|KLF18 31.26834338654808 0.3580123756476716 2 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 80.8 0.0 0.0 6.6148 6.6148 88.72 0.0 0.0 0.0 5.764837301042718 67.6120521100467 5.764837301042718 9.164539485499262 0 1.0 0.0 0.6382104921644451 1.2302046884880935 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;[YE][C(Carbamidomethyl (C))K]QNA{M(Oxidation (M))|F}Y;[{M(Oxidation (M))|F}T][C(Carbamidomethyl (C))N]WNA{M(Oxidation (M))|F}Y;[{M(Oxidation (M))|F}T][C(Carbamidomethyl (C))N]WGGA{M(Oxidation (M))|F}Y 6.6148;5.8645;5.8645;5.8645;5.1172;5.1172;5.1172;4.9038;4.9038;4.1499 -;-;-;-;-;-;-;-;-;- 340 1 1.869 54737.7 1.0 2540 3363 5901 DOHH2_400M_050219_2,5905 DOHH2_400M_050219_2,5905,MTTSSGNQAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5906 31.311 217.0 386900.0 25 0 21905.0 -1 0 103 381.1881237720572 380.1808473054572 1 381.1890441775322 MULTI CID FTMS 0 0 0 5901 226033.046875 1.0 0 0.0 5 2 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 3.8414 0.0 0.0 215.1015911792838 0.0 215.1015911792838 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 3.8414 - 16 + 1 1.869 71704.7 1.0 2541 3363 5901 DOHH2_400M_050219_2,5906 DOHH2_400M_050219_2,5906, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5907 31.318 345.0 260530.0 25 0 27411.0 -1 CPNARCQFAFY 11 100 717.3082644578845 1432.601975982569 2 717.3077270388603 MULTI CID FTMS 0 0 0 5901 210055.15625 0.1931879634575152 3 -0.1983795166015625 6 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PNARC(Carbamidomethyl (C))QFAFY_ ENSG00000129353|ENST00000335757|SLC44A2;ENST00000589561.5_1_19:10746968-10754058:+|nuORF;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;nc|ENSG00000129353|Q8IWA5-3|SLC44A2 13.90604991867851 0.7458848613461305 2 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 76.837 0.0 0.0 5.3635 5.3635 83.361 0.0 0.0 0.0 13.309932190414244 10.62977812912628 10.62977812912628 9.098233696509112 0 0.8182503180159344 0.8538719643217619 0.0 0.805462187404089 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQNA{M(Oxidation (M))|F}Y;[NP]HDEAQQNA{M(Oxidation (M))|F}Y;[HD][NP]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]GGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG][AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG]QGGA{M(Oxidation (M))|F}Y 5.3635;4.7284;4.7284;4.7284;4.4344;4.1371;4.1247;4.0951;4.0951;4.0951 -;-;-;-;-;-;-;-;-;- 646 1 1.869 70024.9 1.0 2542 3363 5901 DOHH2_400M_050219_2,5907 DOHH2_400M_050219_2,5907,CPNARCQFAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5908 31.321 161.0 255720.0 25 0 34759.0 + 485 AEGIHTGQF 9 72 480.2328240069496 958.4510950806992 2 480.2325012087822 MULTI CID FTMS 0 0 0 5901 200529.765625 1.0 0 0.0 7 Unmodified _AEGIHTGQF_ ENSG00000161016|ENST00000528957|RPL8;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;ENST00000531767.1_1_8:146017155-146017514:-|nuORF 13.90604991867851 0.4602628045680013 2 {M(Oxidation (M))|F} 1 8 14.604 0.0 0.0 1.5237 0.0 0.0 793.3718542133149 0.0 793.3718542133149 0.0 1.63303128443836 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.5237 + + 47 + 1 1.869 38944.4 1.0 2543 3363 5901 DOHH2_400M_050219_2,5908 DOHH2_400M_050219_2,5908,AEGIHTGQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5909 31.328 383.0 148000.0 25 0 12227.0 + 324 AEAEKTFSY 9 102 523.2450555149152 1044.4755580966305 2 523.2457763552666 MULTI CID FTMS 0 0 0 5901 165196.890625 1.0 0 0.0 8 Unmodified _AEAEKTFSY_ ENSG00000196655|ENST00000533632|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889505-118889751:+|nuORF;nc|ENSG00000196655|Q9Y296-2|TRAPPC4 27.628801355627647 0.1796483985696185 2 {[CP]|[EA]}KT{M(Oxidation (M))|F}S 6 3 28.945 0.0 0.0 2.7713 0.0 0.0 0.0 378.12805988789904 378.12805988789904 9.604341966403656 0.0 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 + {[CP]|[EA]}KT{M(Oxidation (M))|F}S 2.7713 + + 355 1 1.869 48971.7 1.0 2544 3363 5901 DOHH2_400M_050219_2,5909 DOHH2_400M_050219_2,5909,AEAEKTFSY False True AEAEKTFSY 31.327805 523.245776355267 10968139.0 5901.0 ENSG00000196655|ENST00000533632|TRAPPC4;;nc|ENSG00000196655|Q9Y296-2|TRAPPC4;;ENST00000531290.5_1_11:118889505-118889751:+|nuORF;;ENST00000447216.2_1_11:118889505-118891019:+|nuORF 6.0377152760823565 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5910 31.333 281.0 195650.0 25 0 18600.0 + 21497 LPHVVAVY 8 94 449.2614632236401 896.5083735140803 2 449.2611266970634 MULTI CID FTMS 0 0 0 5901 142019.078125 1.0 0 0.0 9 Unmodified _LPHVVAVY_ REV__ENSG00000132671|ENST00000255008|SSTR4;REV__ENSG00000171596|ENST00000305141|NMUR1 11.114462752807354 0.7467182956244686 2 {I|L}P 2 -1 37.959 0.0 0.0 4.2341 0.0 0.0 0.0 683.347945143286 683.347945143286 25.194590330151847 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}P 4.2341 + + 53 + 1 1.869 49439.6 1.0 2545 3363 5901 DOHH2_400M_050219_2,5910 DOHH2_400M_050219_2,5910,LPHVVAVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5911 31.341 475.0 208950.0 25 0 25253.0 + -1 FELREMVR 8 114 548.2855419204013 0 548.2847167849541 PEAK CID FTMS 0 0 0 5901 126410.2734375 0.555004361001764 -5 0.2310657501220703 10 Oxidation (M) _FELREM(Oxidation (M))VR_ REV__ENST00000297579.9_1_8:104432557-104433221:+|nuORF 14.838274106304384 0.487171416001894 2 HEPPHE 6 -1 23.087 0.0 0.0 2.1092 0.0 0.0 283.1594494640463 82.06685053043202 365.2262999944783 0.0 0.0 0.0 0.0 0 1.8539171939081167 0.0 0.7134679910804405 0.0 HEPPHE 2.1092 - 293 + 1 1.869 81473.6 1.0 2546 3363 5901 DOHH2_400M_050219_2,5911 DOHH2_400M_050219_2,5911,FELREMVR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5912 31.35 469.0 212580.0 25 0 12403.0 + 817 AESYRIQTY 9 123 565.7774058916641 1129.540258850128 2 565.7776367068291 MULTI CID FTMS 0 0 0 5901 108260.5546875 0.1874389895253245 3 -0.1983795166015625 11 Unmodified _AESYRIQTY_ ENSG00000140694|ENST00000437198|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;nc|ENSG00000140694|O95453-4|PARN 37.07464296494664 0.0915153923251136 2 [YT]Q[DV]{I|L}QTY 9 5 [YT]Q[DV]{I|L}Q + + 31.964 1.3025 0.1537 2.8298 2.8298 48.628 0.0 0.0 0.0 0.0 17.426521308612166 0.0 0.0 0 0.8252574989159953 0.0 0.2742275032520141 0.0 [YT]Q[DV]{I|L}QTY 2.8298 - 1010 + 1 1.869 80265.8 1.0 2547 3363 5901 DOHH2_400M_050219_2,5912 DOHH2_400M_050219_2,5912,AESYRIQTY True True AESYRIQTY 31.349686 565.777636706829 3394446.0 5901.0 nc|ENSG00000140694|O95453-3|PARN;;ENSG00000140694|ENST00000437198|PARN;;nc|ENSG00000140694|O95453-4|PARN;;nc|ENSG00000140694|O95453-2|PARN 5.902970314025879 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5913 31.358 452.0 96734.0 25 0 7825.6 + 6712 EDEEDIYKFY 10 92 675.7877781348482 1349.5610033364962 2 675.7880737185478 MULTI CID FTMS 0 0 0 5901 80545.90625 1.0 0 0.0 12 Unmodified _EDEEDIYKFY_ REV__ENST00000405243.1_1_7:22232943-22233279:-|nuORF;REV__nc|ENSG00000136237|Q92565-2|RAPGEF5;REV__nc|ENSG00000136237|Q92565|RAPGEF5 10.073929032068715 0.6785112666868882 2 K{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 4 -1 29.157 0.0 0.0 2.1605 0.0 0.0 746.2905088070025 0.0 746.2905088070025 0.0 14.090431028154846 0.0 0.0 0 0.5 0.0 0.0 0.0 K{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 2.1605 - 87 + 1 1.869 38341.3 1.0 2548 3363 5901 DOHH2_400M_050219_2,5913 DOHH2_400M_050219_2,5913,EDEEDIYKFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5915 31.363 32.0 1237200.0 25 0 166220.0 8625 EVEEDEYKAFY 11 62 711.3078860956854 0 711.3079101443291 PEAK CID FTMS 0 0 0 5914 932382.5625 0.3717200296616124 1 -0.0937690734863281 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.4295705806160874 2 ADQQA[HD]{M(Oxidation (M))|F} 8 10 49.443 0.0 0.0 3.4804 0.0 0.0 327.157265473285 178.05147730045158 505.2087427737366 0.0 0.0 0.0 0.0 0 0.5 0.0 0.805462187404089 0.6747425010840047 ADQQA[HD]{M(Oxidation (M))|F} 3.4804 - 170 + 1 1.881 34053.9 1.0 2549 3364 5914 DOHH2_400M_050219_2,5915 DOHH2_400M_050219_2,5915,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5916 31.376 800.0 194300.0 25 0 24199.0 + 2545 ASEFPGAQHY 10 152 553.748995242515 1105.48343755183 2 553.7484619021416 MULTI CID FTMS 0 0 0 5914 108005.7890625 0.0740849297465573 11 -0.8356208801269531 2 Unmodified _ASEFPGAQHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000566509.5_1_15:73052730-73067416:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-5|ADPGK 43.85829265575387 0.1168243637355526 2 {[SA]|[TG]}E{[WT]|[RM]}P{M(Oxidation (M))|F} 7 7 27.134 0.0 0.0 2.4545 0.0 0.0 0.0 284.0910396347559 284.0910396347559 13.154401861485676 0.0 0.0 0.0 0 0.0 0.958607314841775 1.3494850021680094 0.3807196863200844 {[SA]|[TG]}E{[WT]|[RM]}P{M(Oxidation (M))|F} 2.4545 - 1039 1 1.881 118960.6 0.9700000286102296 2550 3364 5914 DOHH2_400M_050219_2,5916 DOHH2_400M_050219_2,5916,ASEFPGAQHY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5917 31.379 96.0 959160.0 25 0 142680.0 + + 40322 HSGPIHVL 8 89 430.2430292296291 858.4715055260582 2 430.2429077029228 MULTI CID FTMS 0 0 0 5914 529757.3125 0.6167226894791734 -1 0.0618152618408203 3 Unmodified _VHAPSHVL_ nc|ENSG00000133740|Q15329-3|E2F5;ENSG00000133740|ENST00000416274|E2F5;nc|ENSG00000133740|Q15329-2|E2F5 56.04830969593885 0.114297258605095 2 [HS]G[{I|L}P]HV{I|L} 8 -1 + 34.899 0.0 0.0 4.0653 4.0653 75.999 0.0 0.0 0.0 6.3999214437668 8.424778212679477 6.3999214437668 6.3999214437668 0 0.8737125054200234 1.0457574905606752 0.75 0.0 [HS]G[{I|L}P]HV{I|L};[HV][PA]SHV{I|L};[HS]G[{I|L}P]VH{I|L};[HV][PA]SVH{I|L};[HV][PA]VSH{I|L} 4.0653;3.3198;2.4621;1.7166;0.080016 -;+;-;-;- + 73 1 1.881 79734.4 1.0 2551 3364 5914 DOHH2_400M_050219_2,5917 DOHH2_400M_050219_2,5917,VHAPSHVL False False HSGPIHVL 31.378525 430.242907702923 4291609.0 5914.0 nc|ENSG00000133740|Q15329-3|E2F5;;ENSG00000133740|ENST00000416274|E2F5;;nc|ENSG00000133740|Q15329-2|E2F5 3.7872299353281655 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5918 31.381 130.0 821680.0 25 0 86939.0 + + 14298 DPKDLKFIY 9 121 379.8759024886365 1136.6058780661094 3 379.8761169314384 MULTI CID FTMS 0 0 0 5914 516474.40625 0.568777320078091 -1 0.0618152618408203 4 Unmodified _IEKQSLYKE_ ENST00000512029.1_1_5:118832263-118835290:+|nuORF;nc|ENSG00000133835|P51659-2|HSD17B4;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;ENSG00000133835|ENST00000510025|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4 18.1463463914782 0.3454829746528889 2 [TP]{I|L}EKHH{I|L}Y 9 -1 + 37.853 0.0 0.0 3.3304 3.3304 72.424 0.0 0.0 0.0 5.0 7.566212630749831 5.0 5.0 0 0.0 0.0 0.5 0.0 [TP]{I|L}EKHH{I|L}Y;[EP]{I|L}TKHH{I|L}Y;[TP]{I|L}EK{I|L}HHY;[TP]{I|L}ER[{M(Oxidation (M))|F}V]{I|L}Y;{[QN]|[E{I|L}]|[KN]}[QT]PKE[RH];{[QN]|[E{I|L}]|[KN]}[QT]PKT{I|L}[HA];[AG]P{[ET]|[MV]}{I|L}KE[RH];[EP]{I|L}TR[{M(Oxidation (M))|F}V]{I|L}Y;[EP]{I|L}TK{I|L}HHY;[TP]{I|L}EKHHY{I|L} 3.3304;2.8905;2.7154;2.7154;2.6647;2.5346;2.2816;2.2755;2.2755;2.2478 -;-;-;-;-;-;-;-;-;- 679 + 1 1.881 86164.2 1.0 2552 3364 5914 DOHH2_400M_050219_2,5918 DOHH2_400M_050219_2,5918,IEKQSLYKE False False DPKDLKFIY 31.381169 379.876116931438 3022854.25 5914.0 ENST00000512029.1_1_5:118832263-118835290:+|nuORF;;nc|ENSG00000133835|P51659-2|HSD17B4;;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;;ENSG00000133835|ENST00000510025|HSD17B4;;nc|ENSG00000133835|P51659-3|HSD17B4 2.121748729919394 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5919 31.384 168.0 571160.0 25 0 39998.0 + 8489 ETDHINQIGY 10 106 595.277813641868 1188.5410743505358 2 595.2774536013603 MULTI CID FTMS 0 0 0 5914 303039.84375 0.1717380646049757 -2 0.1220264434814453 5 Unmodified _ETDHINQIGY_ ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23 60.07390631473393 0.0363923079357811 2 E{I|L}NQ{I|L}GY 7 3 75.24 0.0 0.0 6.3304 0.0 0.0 353.13594252754064 0.0 353.13594252754064 0.0 55.54699171237935 0.0 0.0 0 1.3807196863200843 0.0 1.8494850021680087 0.3252574989159953 E{I|L}NQ{I|L}GY 6.3304 - 800 1 1.881 74584.4 1.0 2553 3364 5914 DOHH2_400M_050219_2,5919 DOHH2_400M_050219_2,5919,ETDHINQIGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5920 31.389 230.0 256070.0 25 0 22408.0 + 6844 EEDQAAELRAY 11 77 647.7990944198685 1293.583635906537 2 647.7991210818291 MULTI CID FTMS 0 0 0 5914 265723.59375 1.0 0 0.0 6 Unmodified _EEDQAAELRAY_ ENSG00000149100|ENST00000531120|EIF3M;ENST00000531186.5_1_11:32605433-32610279:+|nuORF 49.52724829834842 0.1202481389936634 2 EEDQAAE{I|L}RAY 11 0 + 81.266 0.0 0.0 6.2823 6.2823 77.823 0.0 0.0 0.0 22.59637310505757 0.6888128940781257 0.6888128940781257 0.6888128940781257 0 0.3054621874040891 1.5228787452803376 0.0 0.7302046884880937 + + EEDQAAE{I|L}RAY;EEDQAAE{I|L}[Y{I|L}]N;EED[AG]AAE{I|L}RAY;EED[AG]AAE{I|L}[Y{I|L}]N;EEDQAAE{I|L}[VG]AY;EED[RN]E{I|L}RAY;EEDQ[RD]{I|L}RAY;EEDQ[RD]{I|L}[Y{I|L}]N;EED[RN]E{I|L}[Y{I|L}]N;EED[AG]AAE{I|L}[VG]AY 6.2823;6.229;5.5766;5.5233;5.3405;4.5571;4.5571;4.5039;4.5039;4.3088 +;-;-;-;-;-;-;-;-;- + 242 + 1 1.881 50403.1 1.0 2554 3364 5914 DOHH2_400M_050219_2,5920 DOHH2_400M_050219_2,5920,EEDQAAELRAY True True EEDQAAELRAY 31.388815 647.799121081829 1749806.125 5914.0 ENST00000531186.5_1_11:32605433-32610279:+|nuORF;;ENSG00000149100|ENST00000531120|EIF3M 8.810173670450846 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5921 31.393 226.0 430920.0 25 0 26241.0 + 36776 TEEEKNFKAF 10 117 414.871740176182 1241.593391128746 3 414.8713256716728 MULTI CID FTMS 0 0 0 5914 239546.578125 0.3178137051738253 -2 0.1220264434814453 7 Unmodified _TEEEKNFKAF_ ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13 51.629811660486645 0.0705852162080619 2 {[ET]|[MV]}EEKN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 10 0 {[ET]|[MV]} + + 41.84 7.2185 3.1372 3.3699 3.3699 49.809 0.0 0.0 0.0 0.0 11.193160252753955 0.0 0.0 0 0.7302046884880937 0.0 0.5 0.0 + + {[ET]|[MV]}EEKN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 3.3699 + + 996 + 1 1.881 85633.2 1.0 2555 3364 5914 DOHH2_400M_050219_2,5921 DOHH2_400M_050219_2,5921,TEEEKNFKAF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5922 31.398 293.0 254150.0 25 0 22588.0 + 34952 SQKRHWTF 8 107 363.8581088891056 1088.5524972675166 3 363.8574401736259 MULTI CID FTMS 0 0 0 5914 230514.53125 0.2957606648357605 2 -0.1365642547607422 8 Unmodified _SQKRHWTF_ ENSG00000134480|ENST00000256897|CCNH;ENST00000504878.1_1_5:86708449-86708611:-|nuORF;ENST00000505230.1_1_5:86705105-86708611:-|nuORF;ENST00000510020.5_1_5:86704942-86708611:-|nuORF 14.838274106304384 0.6917062315640577 2 [H{I|L}]{[TV]|[{I|L}S]}WWT{M(Oxidation (M))|F} 8 5 [H{I|L}]{[TV]|[{I|L}S]}WW + + 16.995 -11.963 -1.4546 1.5612 1.5612 47.159 0.0 0.0 0.0 0.0 7.240874602795877 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 [H{I|L}]{[TV]|[{I|L}S]}WWT{M(Oxidation (M))|F} 1.5612 - 40 + 1 1.881 63071.6 1.0 2556 3364 5914 DOHH2_400M_050219_2,5922 DOHH2_400M_050219_2,5922,SQKRHWTF False True SQKRHWTF 31.398437 363.857440173626 3966523.25 5914.0 ENST00000510020.5_1_5:86704942-86708611:-|nuORF;;ENST00000504878.1_1_5:86708449-86708611:-|nuORF;;ENSG00000134480|ENST00000256897|CCNH;;ENST00000505230.1_1_5:86705105-86708611:-|nuORF 5.237079779307048 3.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5923 31.402 203.0 362080.0 25 0 43690.0 + 20928 LNEISEETTIQ 11 78 638.8176263235249 1275.6206997138495 2 638.8182250857353 MULTI CID FTMS 0 0 0 5914 213799.109375 0.4468356379814225 -1 0.0618152618408203 9 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 53.40400417844725 0.0987786977674846 2 {[QV]|[N{I|L}]|[RA]|[KV]}ADE[C(Carbamidomethyl (C))S]{I|L}N{I|L}Q 11 7 + 72.074 0.0 0.0 5.6501 5.6501 76.538 0.0 0.0 0.0 1.5752217873205154 1.5752217873205154 1.5752217873205154 1.5752217873205154 0 2.079689690656103 1.3979400086720375 0.3054621874040891 1.055462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}ADE[C(Carbamidomethyl (C))S]{I|L}N{I|L}Q;{I|L}NAD{[CA]|SS}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}ADE[R{M(Oxidation (M))|F}]GN{I|L}Q;{I|L}NAD{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}NW{[CA]|SS}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}NW{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}NA{[C(Carbamidomethyl (C))E]|[WC]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}A[YN]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}Q;{[QG]|[NA]}{I|L}DE[R{M(Oxidation (M))|F}]GN{I|L}Q;{[QN]|[E{I|L}]|[KN]}[KT][EP]DG{M(Oxidation (M))|F}{I|L}Q 5.6501;5.5267;5.4142;5.3852;5.0867;4.9487;4.7372;4.4128;3.1013;3.0064 -;-;-;-;-;-;-;-;-;- 477 1 1.881 64002.4 1.0 2557 3364 5914 DOHH2_400M_050219_2,5923 DOHH2_400M_050219_2,5923,LNEISEETTIQ True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5924 31.416 800.0 297650.0 25 0 22079.0 -1 LMRMCWQYNPK 11 128 751.3396716482358 1500.6647903632715 2 751.3392211794853 MULTI CID FTMS 0 0 0 5914 163197.40625 0.6703357469688788 -1 0.0618152618408203 10 2 Oxidation (M) _LM(Oxidation (M))RM(Oxidation (M))CWQYNPK_ ENSG00000140443|ENST00000650285|IGF1R 9.38312468134398 0.8308777417566128 2 {[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQQNA{M(Oxidation (M))|F}Y 14 -1 + 104.61 0.0 0.0 6.971 6.971 79.126 0.0 0.0 0.0 0.3175037670706473 11.504697682456351 0.3175037670706473 0.3175037670706473 0 1.468765315847925 1.0 0.3054621874040891 1.9436726795685344 {[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQQNA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}AEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{M(Oxidation (M))|F}AEA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQQGGA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEA[AG]QNA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEAQ[AG]NA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q{M(Oxidation (M))|F}AEAQQNA{M(Oxidation (M))|F}Y 6.971;6.9498;6.5878;6.3679;6.3679;6.3679;6.3435;6.3435;6.3435;6.3343 -;-;-;-;-;-;-;-;-;- 11751 1 1.881 164175.0 0.7200000286102295 2558 3364 5914 DOHH2_400M_050219_2,5924 DOHH2_400M_050219_2,5924,LMRMCWQYNPK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5925 31.421 244.0 248180.0 25 0 17090.0 + 5449 DLQKKPLL 8 97 477.8028472498201 953.59114156644 2 477.8027526736259 MULTI CID FTMS 0 0 0 5914 119851.6640625 0.2818921534932621 3 -0.1961441040039062 11 Unmodified _DLQKKPLL_ ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL 19.438996006549623 0.6237395211498085 2 {I|L} 1 7 11.594 0.0 0.0 1.2158 0.0 0.0 822.4961078523761 0.0 822.4961078523761 0.0 2.1040937697618745 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2158 + + 47 + 1 1.881 54745.8 1.0 2559 3364 5914 DOHH2_400M_050219_2,5925 DOHH2_400M_050219_2,5925,DLQKKPLL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5926 31.428 351.0 222360.0 25 0 11303.0 + 36914 TESPTNPQF 9 123 510.7354579581836 1019.4563629831672 2 510.7360717654228 MULTI CID FTMS 0 0 0 5914 109175.7421875 0.4373451280683568 -2 0.1220264434814453 12 Unmodified _TESPTNPQF_ ENSG00000047346|ENST00000619572|ATOSA;ENST00000534964.6_1_15:52874353-52879255:-|nuORF;ENST00000568871.1_1_15:52874353-52877153:-|nuORF;nc|ENSG00000047346|Q32MH5-3|ATOSA 65.23502041540118 0.0231836506122253 2 [QP]SS{[ET]|[MV]}PQ{M(Oxidation (M))|F} 9 4 + 60.555 0.0 0.0 5.9399 5.9399 85.241 0.0 0.0 0.0 19.78085282822279 9.577570906191896 9.577570906191896 8.454387282529794 0 1.048455006504028 1.2218487496163564 1.274227503252014 0.6747425010840047 [QP]SS{[ET]|[MV]}PQ{M(Oxidation (M))|F};[QP]S[WM]PQ{M(Oxidation (M))|F};[TP]NS{[ET]|[MV]}PQ{M(Oxidation (M))|F};[PS]QS{[ET]|[MV]}PQ{M(Oxidation (M))|F};{[QS]|[NT]}PS{[ET]|[MV]}PQ{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}DPTNPQ{M(Oxidation (M))|F};[QP]SS{[QG]|[NA]}AAQ{M(Oxidation (M))|F};{[ET]|[MV]}SPTNPQ{M(Oxidation (M))|F};[WM]PTNPQ{M(Oxidation (M))|F};[TP]N[WM]PQ{M(Oxidation (M))|F} 5.9399;5.1106;3.9996;3.9781;3.8123;3.8116;3.4245;3.3392;3.1718;3.1703 -;-;-;-;-;-;-;+;-;- + 807 1 1.881 67057.6 1.0 2560 3364 5914 DOHH2_400M_050219_2,5926 DOHH2_400M_050219_2,5926,TESPTNPQF True True TESPTNPQF 31.428227 510.736071765423 1301978.25 5914.0 nc|ENSG00000047346|Q32MH5-3|ATOSA;;ENST00000568871.1_1_15:52874353-52877153:-|nuORF;;ENST00000534964.6_1_15:52874353-52879255:-|nuORF;;ENSG00000047346|ENST00000619572|ATOSA 6.565953413645427 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5927 31.442 800.0 47627.0 25 0 11027.0 -1 0 45 1100.1223876813187 3297.345333644156 3 1100.792041003704 MULTI CID FTMS 0 0 0 5914 103795.9140625 1.0 0 0.0 13 2 EM 2 -1 8.5835 0.0 0.0 0.26032 0.0 0.0 2374.941477298257 659.2946871393186 3034.236164437576 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EM 0.26032 - 9 + 1 1.881 39307.1 0.4199999868869781 2561 3364 5914 DOHH2_400M_050219_2,5927 DOHH2_400M_050219_2,5927, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5928 31.452 544.0 160090.0 25 0 11910.0 + 35384 STEQSLYY 8 131 495.72239286331774 989.4302327934356 2 495.7233459353447 MULTI CID FTMS 0 0 0 5914 104031.6328125 0.2938691174089755 3 -0.1961441040039062 14 Unmodified _STEQSLYY_ ENSG00000196208|ENST00000381486|GREB1;nc|ENSG00000196208|Q4ZG55-4|GREB1 10.183394434864962 0.7604730176254005 2 YY 2 6 16.454 0.0 0.0 1.6629 0.0 0.0 645.2924286936293 0.0 645.2924286936293 0.0 5.452833976687915 0.0 0.0 0 0.0 0.0 0.0 0.0 + YY 1.6629 + + 149 + 1 1.881 70786.2 1.0 2562 3364 5914 DOHH2_400M_050219_2,5928 DOHH2_400M_050219_2,5928,STEQSLYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5930 31.458 135.0 407560.0 25 0 47931.0 + 25847 NLDQATRVAY 10 86 575.7956341247176 1149.576715316235 2 575.7958862185478 MULTI CID FTMS 0 0 0 5929 357105.875 0.1921275407823809 3 -0.2369136810302734 1 Unmodified _NLDQATRVAY_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 59.36838082759317 0.0382430275470746 2 {[QV]|[N{I|L}]|[RA]|[KV]}DQATVRAY 10 2 + 79.659 0.0 0.0 6.9294 6.9294 89.659 0.0 0.0 0.0 61.33085333508717 14.146518864155126 14.146518864155126 9.164539485499262 0 1.6989700043360187 2.0 0.0 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}DQATVRAY;{[QV]|[N{I|L}]|[RA]|[KV]}D[AG]ATVRAY;{[QV]|[N{I|L}]|[RA]|[KV]}ENATVRAY;{[QV]|[N{I|L}]|[RA]|[KV]}DQTVARAY;{[QV]|[N{I|L}]|[RA]|[KV]}EGGATVRAY;{[QV]|[N{I|L}]|[RA]|[KV]}DQTVA[VG]AY;[HD]RAY[RV]AY;[KA]{[CP]|[EA]}[RD]ARAY;[HD]RAV[YR]AY;[KA]{[CP]|[EA]}[WR]RAY 6.9294;6.1322;5.7482;5.2983;4.951;4.501;2.0278;1.7083;1.5545;1.402 -;-;-;-;-;-;-;-;-;- 199 + 1 1.88 46014.3 1.0 2563 3365 5929 DOHH2_400M_050219_2,5930 DOHH2_400M_050219_2,5930,NLDQATRVAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5931 31.461 151.0 353910.0 25 0 48609.0 + 7376 EGFDRSTSL 9 87 506.24060096613664 1010.4666489990732 2 506.2405578494072 MULTI CID FTMS 0 0 0 5929 167336.5625 0.3476791275326882 3 -0.2369136810302734 2 Unmodified _EGFDRSTSL_ ENSG00000168209|ENST00000307365|DDIT4;ENST00000471240.1_1_10:74033815-74034322:+|nuORF 19.256988751693697 0.3154191944385105 2 W{M(Oxidation (M))|F}[DG]{[WT]|[RM]}S{I|L} 8 4 + 38.179 0.0 0.0 3.7784 3.7784 84.06 0.0 0.0 0.0 22.24932183384788 14.904630595263413 14.904630595263413 38.17918449261214 0 0.3252574989159953 0.0 0.7302046884880937 0.0 W{M(Oxidation (M))|F}[DG]{[WT]|[RM]}S{I|L} 3.7784 - 35 + 1 1.88 47396.5 1.0 2564 3365 5929 DOHH2_400M_050219_2,5931 DOHH2_400M_050219_2,5931,EGFDRSTSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5932 31.463 107.0 581620.0 25 0 45132.0 + 36777 TEEEKNFKAF 10 94 621.804002952336 1241.5934529714718 2 621.8040038943291 MULTI CID FTMS 0 0 0 5929 582799.5625 0.9368957327948216 -1 0.0937690734863281 3 Unmodified _TEEEKNFKAF_ ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000484610.5_1_16:89627907-89629447:+|nuORF;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;nc|ENSG00000167526|P26373-2|RPL13 93.93812099017352 0.0090513810409226 2 EETEKN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 10 2 + 68.681 0.0 0.0 5.5317 5.5317 81.072 0.0 0.0 0.0 5.963811584774007 7.548954067622304 5.963811584774007 5.963811584774007 0 2.1791746928241125 1.6989700043360187 1.341129063296272 0.3054621874040891 EETEKN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};{[ET]|[MV]}EEKN{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};TEE[YV]QQKA{M(Oxidation (M))|F};{[ET]|[MV]}E[RN]T{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};TEEEK[HV]N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};TEEEK[HV]K{[QD]|[EN]|[WG]|[KD]|[RS]};TEEE[HV]KN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};TE[HV]KEEN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};TEEEK[HV]GG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};TE[HV]EEKN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.5317;5.0513;4.9236;4.812;4.6749;4.3318;4.1899;4.1258;3.9367;3.8617 -;+;-;-;-;-;-;-;-;- + 1458 1 1.88 50695.9 1.0 2565 3365 5929 DOHH2_400M_050219_2,5932 DOHH2_400M_050219_2,5932,TEEEKNFKAF True True TEEEKNFKAF 31.463379 621.804003894329 7714462.75 5929.0 ENST00000399461.8_1_16:89627605-89629447:+|nuORF;;ENSG00000167526|ENST00000311528|RPL13;;ENST00000570149.1_1_16:89628679-89629447:+|nuORF;;nc|ENSG00000167526|P26373-2|RPL13;;ENST00000484610.5_1_16:89627907-89629447:+|nuORF 7.954847494761149 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5933 31.477 800.0 255180.0 25 0 21387.0 39229 TYYRDEHIYPY 11 126 760.3454881209823 1518.6764233087645 2 760.3441650271416 MULTI CID FTMS 0 0 0 5929 234064.578125 1.0 0 0.0 4 Unmodified _TYYRDEHIYPY_ ENSG00000133895|ENST00000450708|MEN1;nc|ENSG00000133895|O00255-1|MEN1;nc|ENSG00000133895|O00255-3|MEN1 13.042465956692816 0.7638483625850725 2 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F}Y 14 12 + 87.105 0.0 0.0 5.7356 5.7356 77.58 0.0 0.0 0.0 2.011034388851229 10.311894545657196 2.011034388851229 2.011034388851229 0 0.7742275032520141 0.8239087409443188 0.0 2.274227503252014 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]NA[HV]EAQQNA{M(Oxidation (M))|F}Y 5.7356;5.6032;5.1397;5.1397;5.1397;5.0824;5.0058;5.0058;5.0058;4.8789 -;-;-;-;-;-;-;-;-;- 10032 1 1.88 142698.9 0.8799999952316284 2566 3365 5929 DOHH2_400M_050219_2,5933 DOHH2_400M_050219_2,5933,TYYRDEHIYPY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5934 31.491 800.0 280710.0 25 0 36288.0 -1 VYTWWNCKWIC 11 110 808.3604097917668 1614.7062666503334 2 808.3589965701103 MULTI CID FTMS 0 0 0 5929 219503.890625 1.0 0 0.0 5 2 Carbamidomethyl (C) _VYTWWNC(Carbamidomethyl (C))KWIC(Carbamidomethyl (C))_ ENST00000263409.8_1_5:38481272-38481362:-|nuORF 0.3506318815782774 0.8734936314171269 2 {M(Oxidation (M))|F}ANQQAE[HA]YQ 11 -1 89.628 0.0 0.0 5.5507 0.0 0.0 309.1327285796802 0.0 309.1327285796802 0.0 72.18102669713869 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 2.341129063296272 {M(Oxidation (M))|F}ANQQAE[HA]YQ 5.5507 - 5450 + 1 1.88 157095.3 0.8399999737739563 2567 3365 5929 DOHH2_400M_050219_2,5934 DOHH2_400M_050219_2,5934,VYTWWNCKWIC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5935 31.495 180.0 305930.0 25 0 37218.0 20816 LLWLSCSI 8 88 467.7582124481208 933.5018719630416 2 467.7586852908134 MULTI CID FTMS 0 0 0 5929 214339.5 0.6106970712403522 3 -0.2369136810302734 6 Unmodified _LLWLSCSI_ nc|ENSG00000087460|O95467|GNAS 19.438996006549623 0.6237395211498085 2 {M(Oxidation (M))|F}P 2 8 22.206 0.0 0.0 2.3788 0.0 0.0 671.395799705275 0.0 671.395799705275 0.0 -0.5102999566398125 -0.5102999566398125 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}P 2.3788 - 37 1 1.88 52924.6 1.0 2568 3365 5929 DOHH2_400M_050219_2,5935 DOHH2_400M_050219_2,5935,LLWLSCSI False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 5937 31.499 45.0 1623200.0 25 0 100660.0 28282 PRLTYKTV 8 97 489.2925223477481 976.570491762296 2 489.2922241091728 MULTI CID FTMS 0 0 0 5936 1269755.75 0.8900713420757022 1 -0.059579849243164 1 Unmodified _PRLTYKTV_ ENSG00000147416|ENST00000276390|ATP6V1B2;ENST00000523482.5_1_8:20054917-20070443:+|nuORF 24.67388899826682 0.525179942228231 2 [R{I|L}]PPP[TP]TV 9 6 + 43.922 0.0 0.0 4.4976 4.4976 83.778 0.0 0.0 0.0 16.48346336419293 16.476701354410594 16.476701354410594 13.26606256887672 0 0.8424778212679485 1.0 0.4247425010840047 0.2887254899964357 [R{I|L}]PPP[TP]TV;[R{I|L}]PPP{[VA]|[{I|L}G]}EV;YV{I|L}{I|L}[RN]TV;[R{I|L}][YK][TP]TV;[R{I|L}][YK]{[VA]|[{I|L}G]}EV;[R{I|L}][YG][K{I|L}]EV;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}TR{I|L}{[MS]|[{M(Oxidation (M))|F}A]} 4.4976;3.1391;2.6504;2.1593;0.80089;0.80089;0.27479 -;-;-;-;-;-;- 113 1 1.88 60923.6 1.0 2569 3366 5936 DOHH2_400M_050219_2,5937 DOHH2_400M_050219_2,5937,PRLTYKTV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5938 31.505 319.0 401030.0 25 0 20123.0 + 33030 SEPEGEGQAW 10 170 545.2280349174137 1088.4415169016272 2 545.2280151247978 MULTI CID FTMS 0 0 0 5936 152975.71875 0.83642444582143 -2 0.1365642547607422 2 Unmodified _SEPEGEGQAW_ ENSG00000125637|ENST00000245796|PSD4;ENST00000418251.6_1_2:113931616-113943025:+|nuORF;nc|ENSG00000125637|Q8NDX1-2|PSD4 13.90604991867851 0.6142120002215601 2 SM{M(Oxidation (M))|F}{[RE]|[WV]}AW 7 6 33.716 0.0 0.0 3.0976 0.0 0.0 163.02558680637236 0.0 163.02558680637236 0.0 7.573739405736415 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 SM{M(Oxidation (M))|F}{[RE]|[WV]}AW 3.0976 - 999 + 1 1.88 101601.7 1.0 2570 3366 5936 DOHH2_400M_050219_2,5938 DOHH2_400M_050219_2,5938,SEPEGEGQAW False True SEPEGEGQAW 31.504893 545.2286 3249963.0 5936.0 nc|ENSG00000125637|Q8NDX1-2|PSD4;;ENSG00000125637|ENST00000245796|PSD4;;ENST00000418251.6_1_2:113931616-113943025:+|nuORF 4.106109142303467 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5939 31.507 96.0 677270.0 25 0 58423.0 + 36796 TEHPKINEW 9 102 577.2854277939053 1152.5563026546106 2 577.2856933474541 MULTI CID FTMS 0 0 0 5936 588873.3125 0.5469313360626961 -1 0.042795181274414 3 Unmodified _TEHPKINEW_ ENSG00000197102|ENST00000360184|DYNC1H1 55.50274090549119 0.0285720310785888 2 [KP]{I|L}NEHTEW 9 6 + 36.297 0.0 0.0 3.1492 3.1492 70.387 0.0 0.0 0.0 2.191512336730036 11.970933729056023 2.191512336730036 3.5933704545900227 0 0.4247425010840047 0.0 0.4247425010840047 0.0 [KP]{I|L}NEHTEW;[KP]{I|L}NT[MT]YW;[KP]{I|L}NT[MT]H[DP];[KP]{I|L}GGEHTEW;[KP]{I|L}C(Carbamidomethyl (C)){[WT]|[RM]}YW;{[DS]|[MA]|[CV]|TT}MN[K{I|L}]PYW;[KP]{I|L}GGT[MT]YW;{[QV]|[N{I|L}]|[RA]|[KV]}[KP]EHTEW;[KP]{I|L}C(Carbamidomethyl (C)){[WT]|[RM]}H[DP];{[ET]|[MV]}HP[K{I|L}][YE]H 3.1492;2.8375;2.5647;2.3503;2.2754;2.0932;2.0385;2.0204;1.998;1.9293 -;-;-;-;-;-;-;-;-;- 290 1 1.88 57502.6 1.0 2571 3366 5936 DOHH2_400M_050219_2,5939 DOHH2_400M_050219_2,5939,TEHPKINEW True True TEHPKINEW 31.506983 577.285693347454 10623336.5 5936.0 ENSG00000197102|ENST00000360184|DYNC1H1 7.278477509816487 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5940 31.51 155.0 673520.0 25 0 93044.0 + 33388 SGPNGYTSY 9 105 473.19989946669546 944.3852460001908 2 473.1997863650322 MULTI CID FTMS 0 0 0 5936 365489.53125 0.9495008726468208 -1 0.042795181274414 4 Unmodified _SGPNGYTSY_ REV__ENSG00000270647|ENST00000605844|TAF15;REV__nc|ENSG00000270647|Q92804-2|TAF15 15.847184025352805 0.4077185912009129 2 SY 2 -1 27.519 0.0 0.0 2.9139 0.0 0.0 676.2789055234316 0.0 676.2789055234316 0.0 5.590922227124764 0.0 0.0 0 0.3054621874040891 0.0 0.3494850021680094 0.0 SY 2.9139 + + 80 + 1 1.88 85884.1 1.0 2572 3366 5936 DOHH2_400M_050219_2,5940 DOHH2_400M_050219_2,5940,SGPNGYTSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5941 31.514 219.0 337260.0 25 0 21345.0 -1 ETGEYYMLQE 10 103 426.8462028227546 1277.5167790684638 3 426.8460265994072 MULTI CID FTMS 0 0 0 5936 258821.609375 0.7821913980107237 -1 0.042795181274414 5 Oxidation (M) _ETGEYYM(Oxidation (M))LQE_ ENSG00000130024|ENST00000339209|PHF10;ENST00000464779.1_1_6:170117898-170118989:-|nuORF;nc|ENSG00000130024|Q8WUB8-2|PHF10;nc|ENSG00000130024|Q8WUB8-3|PHF10 35.61225514009592 0.2039006631696762 2 TEG{M(Oxidation (M))|F}KE 6 -1 64.848 0.0 0.0 5.0761 0.0 0.0 0.0 583.1752413385374 583.1752413385374 49.89938614737687 0.0 0.0 0.0 0 0.6382104921644451 1.5228787452803376 0.9247425010840048 0.0 TEG{M(Oxidation (M))|F}KE 5.0761 - 341 + 1 1.88 66627.1 1.0 2573 3366 5936 DOHH2_400M_050219_2,5941 DOHH2_400M_050219_2,5941,ETGEYYMLQE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5942 31.528 800.0 129830.0 25 0 9035.6 + -1 KKCCYYTLENE 11 106 754.3337452997687 1506.6529376663373 2 754.3348876833916 MULTI CID FTMS 0 0 0 5936 95445.4609375 0.972196125322626 -2 0.1365642547607422 6 2 Carbamidomethyl (C) _KKC(Carbamidomethyl (C))C(Carbamidomethyl (C))YYTLENE_ REV__ENSG00000085063|ENST00000642928|CD59;REV__nc|ENSG00000284969|P13987-2|CD59 7.608950283845883 0.8392484121837455 2 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[RH]{M(Oxidation (M))|F}Y 12 -1 + 61.675 0.0 0.0 4.0935 4.0935 76.346 0.0 0.0 0.0 50.41579171871369 11.35976191243214 11.35976191243214 6.488769377790739 0 1.0941876774005248 0.0 0.0 1.1382104921644451 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[RH]{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NW[RH]{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGAD[RH]{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NAD[RH]{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[KA]E{M(Oxidation (M))|F}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NW[RH]{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGW[RH]{M(Oxidation (M))|F}Y;[SG][PS][RH]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NG{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[KA]E{M(Oxidation (M))|F}AN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.0935;3.6628;3.4896;3.4896;3.173;3.0569;3.0569;2.973;2.6404;2.5708 -;-;-;-;-;-;-;-;-;- 275 + 1 1.88 77101.3 0.6100000143051147 2574 3366 5936 DOHH2_400M_050219_2,5942 DOHH2_400M_050219_2,5942,KKCCYYTLENE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5943 31.534 331.0 271460.0 25 0 29688.0 + 38610 HGHLKVVEL 9 120 516.3009968490343 0 516.3016845583916 PEAK CID FTMS 0 0 0 5936 209399.953125 0.5901917850689583 5 -0.4825820922851562 7 Unmodified _TTEIKRRQ_ nc|ENSG00000138376|Q99728-2|BARD1;nc|ENSG00000138376|Q99728-3|BARD1;ENSG00000138376|ENST00000260947|BARD1 7.910154910731844 0.5650536163073903 2 TVVK{I|L} 5 6 23.188 0.0 0.0 2.2499 0.0 0.0 159.08332641715987 328.11676965885005 487.2000960760099 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TVVK{I|L} 2.2499 - 32 + 1 1.88 75002.3 1.0 2575 3366 5936 DOHH2_400M_050219_2,5943 DOHH2_400M_050219_2,5943,TTEIKRRQ False False HGHLKVVEL 31.534041 516.301684558392 5512174.5 5936.0 nc|ENSG00000138376|Q99728-2|BARD1;;nc|ENSG00000138376|Q99728-3|BARD1;;ENSG00000138376|ENST00000260947|BARD1 6.279961427052816 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5944 31.54 355.0 417100.0 25 0 32870.0 12874 GVVYKIWIP 9 131 358.88435158839025 1073.6312253653707 3 359.2176391482353 MULTI CID FTMS 0 0 0 5936 111177.0703125 1.0 0 0.0 8 Unmodified _GVVYKIWIP_ ENSG00000124198|ENST00000371917|ARFGEF2 4.75600775471527 0.7486543447549536 2 W 1 8 13.979 0.0 0.0 1.3021 0.0 0.0 869.5406014413458 0.0 869.5406014413458 0.0 0.2241553025821474 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 1.3021 + + 42 + 1 1.88 121916.8 1.0 2576 3366 5936 DOHH2_400M_050219_2,5944 DOHH2_400M_050219_2,5944,GVVYKIWIP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5945 31.554 800.0 154460.0 25 0 44040.0 + 26592 NVPGEIVE 8 86 856.4418202828532 855.4345438162532 1 856.4441406130791 MULTI CID FTMS 0 0 0 5936 104827.140625 0.8713340861848288 -1 0.042795181274414 9 Unmodified _NVPGEIVE_ CON__P02666 65.23502041540118 0.1164516490932339 2 NV{M(Oxidation (M))|F}V{I|L}E 6 4 71.943 0.0 0.0 8.4101 0.0 0.0 0.0 151.05161462955314 151.05161462955314 39.63615337528019 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.0044321917401078 0.0 NV{M(Oxidation (M))|F}V{I|L}E 8.4101 - 429 + 1 1.88 85311.9 0.6000000238418579 2577 3366 5936 DOHH2_400M_050219_2,5945 DOHH2_400M_050219_2,5945,NVPGEIVE True True NVPGEIVE 31.554303 856.444140613079 1453211.0 5936.0 P02666 4.1819948355356855 1.0 True 8.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 5947 31.559 49.0 1073100.0 25 0 67387.0 + 8885 FAEHNDLQY 9 72 568.7539151085082 1135.4932772838165 2 568.7541992068291 MULTI CID FTMS 0 0 0 5946 1039238.4375 0.4465152891028004 2 -0.2319469451904297 1 Unmodified _FAEHNDLQY_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 34.40172386719151 0.1061884637610825 2 ND{I|L}QY 5 4 37.281 0.0 0.0 3.2833 0.0 0.0 484.20808608222814 0.0 484.20808608222814 0.0 26.8753063169585 0.0 0.0 0 0.5 0.0 0.0 0.75 + ND{I|L}QY 3.2833 + + 154 1 1.88 45141.9 1.0 2578 3367 5946 DOHH2_400M_050219_2,5947 DOHH2_400M_050219_2,5947,FAEHNDLQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5948 31.56 45.0 1160100.0 25 0 88009.0 + 31843 RTEPFQDGY 9 72 556.7537014530449 1111.4928499728896 2 556.7535888552666 MULTI CID FTMS 0 0 0 5946 823061.25 0.5437636462420049 2 -0.2319469451904297 2 Unmodified _RTEPFQDGY_ ENSG00000164543|ENST00000319357|STK17A 32.037481411007896 0.1235546156350648 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}QDGY 9 0 + 67.599 0.0 0.0 6.0818 6.0818 87.656 0.0 0.0 0.0 4.137342758552691 57.14123782136497 4.137342758552691 9.208187539523747 0 1.25 0.0 0.3494850021680094 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}QDGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}[AG]DGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP{M(Oxidation (M))|F}{[WN]|[YH]}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP[NG][{M(Oxidation (M))|F}E]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EP[NG]Y[{M(Oxidation (M))|F}E] 6.0818;5.2534;3.3403;2.2362;1.8541 +;-;-;-;- + 126 1 1.88 42947.0 1.0 2579 3367 5946 DOHH2_400M_050219_2,5948 DOHH2_400M_050219_2,5948,RTEPFQDGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5949 31.561 43.0 1439100.0 25 0 362310.0 + 36797 TEHPKINEW 9 75 385.19351176296846 1152.558705889105 3 385.1929809451103 MULTI CID FTMS 0 0 0 5946 861150.375 1.0 0 0.0 3 Unmodified _TEHPKINEW_ ENSG00000197102|ENST00000360184|DYNC1H1 12.531546534597751 0.4974689918368763 2 W 1 8 13.979 0.0 0.0 1.2129 0.0 0.0 948.4680972238694 0.0 948.4680972238694 0.0 0.8768453136694081 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 1.2129 + + 48 + 1 1.88 54648.9 1.0 2580 3367 5946 DOHH2_400M_050219_2,5949 DOHH2_400M_050219_2,5949,TEHPKINEW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5950 31.564 131.0 880960.0 25 0 118460.0 + 32843 SEGTSSCQY 9 91 481.1825617054423 960.3505704776846 2 481.1823303103447 MULTI CID FTMS 0 0 0 5946 579380.5 0.9447972537338502 1 -0.1345386505126953 4 Unmodified _SEGTSSCQY_ REV__ENSG00000143107|ENST00000370017|FNDC7 14.838274106304384 0.4350285940865338 2 SGDY 4 -1 29.011 0.0 0.0 3.0209 0.0 0.0 0.0 535.1845764142382 535.1845764142382 1.4613794653762504 0.0 0.0 0.0 0 0.6237125054200234 0.6575773191777937 0.0 0.0 SGDY 3.0209 - 132 + 1 1.88 93960.4 1.0 2581 3367 5946 DOHH2_400M_050219_2,5950 DOHH2_400M_050219_2,5950,SEGTSSCQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5951 31.566 131.0 577810.0 25 0 50617.0 + 13500 HMFTKEEL 8 103 517.7525229754036 0 517.7523681521416 PEAK CID FTMS 0 0 0 5946 382720.78125 1.0 0 0.0 5 Unmodified _HMFTKEEL_ ENSG00000143106|ENST00000271308|PSMA5;nc|ENSG00000143106|P28066-2|PSMA5 65.23502041540118 0.005571481867736 2 T{M(Oxidation (M))|F}M 3 7 18.962 0.0 0.0 1.8348 0.0 0.0 517.2729770037384 134.03647791080314 651.3094549145416 0.0 0.0 0.0 0.0 0 1.274227503252014 0.0 0.3494850021680094 0.0 T{M(Oxidation (M))|F}M 1.8348 - 205 + 1 1.88 61355.5 1.0 2582 3367 5946 DOHH2_400M_050219_2,5951 DOHH2_400M_050219_2,5951,HMFTKEEL True True HMFTKEEL 31.566457 517.752368152142 2195447.5 5946.0 ENSG00000143106|ENST00000271308|PSMA5;;nc|ENSG00000143106|P28066-2|PSMA5 1.590490500132243 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5952 31.569 138.0 490160.0 25 0 38464.0 + 14163 SGDPGGALSY 10 95 461.8752392957234 1382.6038884873703 3 462.2091552615166 MULTI CID FTMS 0 0 0 5946 341513.59375 1.0 0 0.0 6 Unmodified _IDCYKYLESSY_ ENST00000266557.3_1_12:6554080-6554389:+|nuORF 2.843284757254958 0.8617331327080043 2 {I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}SY 5 6 28.966 0.0 0.0 2.095 0.0 0.0 728.3007401492829 0.0 728.3007401492829 0.0 16.245980483695774 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 {I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}SY 2.095 - 212 + 1 1.88 58817.5 1.0 2583 3367 5946 DOHH2_400M_050219_2,5952 DOHH2_400M_050219_2,5952,IDCYKYLESSY False False SGDPGGALSY 31.569234 462.209155261517 2445599.0 5946.0 ENST00000266557.3_1_12:6554080-6554389:+|nuORF 2.268426418304444 2.0 False 10.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 5953 31.583 800.0 168270.0 25 0 9521.9 + -1 ISDEHGIDPTGTY 13 134 702.8172743035188 1403.6199956738376 2 702.8171874880791 MULTI CID FTMS 0 0 0 5946 175757.59375 1.0 0 0.0 7 Carbamidomethyl (C) _IFERWEC(Carbamidomethyl (C))TTY_ ENSG00000196230|ENST00000327892|TUBB;ENSG00000104833|ENST00000264071|TUBB4A;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;ENSG00000188229|ENST00000340384|TUBB4B;ENST00000518096.1_1_8:30209523-30210210:+|nuORF 18.1463463914782 0.5430639438673815 2 [YT]G{M(Oxidation (M))|F}{I|L}G{I|L}D[TP]GTY 13 -1 + 95.998 0.0 0.0 6.8394 6.8394 62.074 0.0 0.0 0.0 4.259687322722812 15.136929002448156 4.259687322722812 0.0 0 1.7302046884880935 1.2218487496163564 1.805462187404089 0.0 [YT]G{M(Oxidation (M))|F}{I|L}G{I|L}D[TP]GTY;[YT]G{M(Oxidation (M))|F}{I|L}GD{I|L}[TP]GTY;{[SA]|[TG]}Y{M(Oxidation (M))|F}{I|L}GD{I|L}[TP]GTY;{[SA]|[TG]}Y{M(Oxidation (M))|F}{I|L}G{I|L}D[TP]GTY;[YT]G{M(Oxidation (M))|F}{I|L}GD{I|L}{[SA]|[TG]}PTY;[YT]G{M(Oxidation (M))|F}{I|L}G{I|L}D{[SA]|[TG]}PTY;[TP]GTY{M(Oxidation (M))|F}S{I|L}[TP]GTY;{[QN]|[E{I|L}]|[KN]}NY{M(Oxidation (M))|F}S{I|L}[TP]GTY;{[SA]|[TG]}PTY{M(Oxidation (M))|F}S{I|L}[TP]GTY;[YT]G{[ET]|[MV]}SD{I|L}[TP]GTY 6.8394;6.8394;6.5359;6.5359;6.1601;6.1601;6.1595;5.9744;5.9733;5.9133 -;-;-;-;-;-;-;-;-;- 5335 1 1.88 99238.2 0.8500000238418579 2584 3367 5946 DOHH2_400M_050219_2,5953 DOHH2_400M_050219_2,5953,IFERWECTTY False False ISDEHGIDPTGTY 31.583068 702.817187488079 1155701.5 5946.0 ENSG00000196230|ENST00000327892|TUBB;;ENSG00000104833|ENST00000264071|TUBB4A;;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;;ENSG00000188229|ENST00000340384|TUBB4B;;ENST00000518096.1_1_8:30209523-30210210:+|nuORF 7.539161523183186 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5954 31.59 407.0 201680.0 25 0 21305.0 + 6910 EEFEYQRSY 9 93 625.7692880914748 1249.5240232497497 2 625.7692748904228 MULTI CID FTMS 0 0 0 5946 129145.9765625 1.0 0 0.0 8 Unmodified _EEFEYQRSY_ ENSG00000035499|ENST00000265036|DEPDC1B 51.629811660486645 0.0367964933207742 2 EE{M(Oxidation (M))|F}EYQRSY 9 0 + 72.775 0.0 0.0 5.8242 5.8242 86.822 0.0 0.0 0.0 62.68623129393987 14.09256854528806 14.09256854528806 9.208187539523747 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.566901560044258 + + EE{M(Oxidation (M))|F}EYQRSY;EE{M(Oxidation (M))|F}EY[AG]RSY;EE{M(Oxidation (M))|F}[YG]{[CP]|[EA]}RSY;EE{M(Oxidation (M))|F}EYS[HN][VP];EE{M(Oxidation (M))|F}E[HM]RC(Carbamidomethyl (C)){I|L};[{M(Oxidation (M))|F}E][Y{I|L}]YE{M(Oxidation (M))|F}[HC];[DP][RP]SYE{M(Oxidation (M))|F}[HC];EE{M(Oxidation (M))|F}E[HM]R[CG]{I|L};EE{M(Oxidation (M))|F}E[HM][QA]{[ET]|[MV]};EE{M(Oxidation (M))|F}E[HM][VG]C(Carbamidomethyl (C)){I|L} 5.8242;5.0873;3.6183;3.3724;3.2646;2.9462;2.7098;2.5277;2.4501;2.3185 +;-;-;-;-;-;-;-;-;- + 303 + 1 1.88 64907.1 1.0 2585 3367 5946 DOHH2_400M_050219_2,5954 DOHH2_400M_050219_2,5954,EEFEYQRSY True True EEFEYQRSY 31.590355 625.769274890423 572340.75 5946.0 ENSG00000035499|ENST00000265036|DEPDC1B 7.972461859385173 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5955 31.604 800.0 219510.0 25 0 18629.0 + 5388 DLKRHIISV 9 213 360.8889257754938 0 360.8891479372978 PEAK CID FTMS 0 0 0 5946 91639.8046875 1.0 0 0.0 9 Unmodified _DLKRHIISV_ ENSG00000005889|ENST00000304543|ZFX;ENSG00000147180|ENST00000674551|ZNF711;nc|ENSG00000005889|P17010-2|ZFX;nc|ENSG00000005889|P17010-3|ZFX;nc|ENSG00000147180|Q9Y462-2|ZNF711;nc|ENSG00000147180|Q9Y462|ZNF711 16.149105407346934 0.2417352846137613 2 RS 2 7 6.8372 0.0 0.0 0.94992 0.0 0.0 359.5573792836064 114.05665002994374 473.6140293135501 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4134117563873403 0.2614393726401688 RS 0.94992 - 14 + 1 1.88 141679.5 0.8600000143051147 2586 3367 5946 DOHH2_400M_050219_2,5955 DOHH2_400M_050219_2,5955,DLKRHIISV False True DLKRHIISV 31.60417 360.889147937298 549933.125 5946.0 nc|ENSG00000147180|Q9Y462-2|ZNF711;;nc|ENSG00000147180|Q9Y462|ZNF711;;nc|ENSG00000005889|P17010-2|ZFX;;nc|ENSG00000005889|P17010-3|ZFX;;ENSG00000147180|ENST00000674551|ZNF711;;ENSG00000005889|ENST00000304543|ZFX 1.425671974817912 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5956 31.612 420.0 337810.0 25 0 16375.0 + 2665 ATDLTREVY 9 149 534.2726938298987 0 534.2744628787041 PEAK CID FTMS 0 0 0 5946 85290.0 0.1079929451319962 -1 0.059579849243164 10 Unmodified _ATDLTREVY_ ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-2|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2 66.68293810318366 0.0142753150575999 2 TD{I|L}TREV 7 2 36.985 0.0 0.0 3.4677 0.0 0.0 71.04506920100978 178.05169092349846 249.09676012450825 0.0 0.0 0.0 0.0 0 1.885151878060192 0.0 0.3252574989159953 0.5451140161145328 + TD{I|L}TREV 3.4677 + + 863 + 1 1.88 115906.2 1.0 2587 3367 5946 DOHH2_400M_050219_2,5956 DOHH2_400M_050219_2,5956,ATDLTREVY True True ATDLTREVY 31.61167 534.274462878704 4323257.0 5946.0 nc|ENSG00000024048|Q8IWV8|UBR2;;nc|ENSG00000024048|Q8IWV8-2|UBR2;;ENSG00000024048|ENST00000372901|UBR2 7.405860265096028 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5957 31.62 454.0 367570.0 25 0 26074.0 + 31699 RRNPEPLRF 9 168 395.5599427344547 1183.6579988035642 3 395.5596191287041 MULTI CID FTMS 0 0 0 5946 78554.8828125 0.1029210149962352 -2 0.1023750305175781 11 Unmodified _RRNPEPLRF_ ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000151366|O95298-2|NDUFC2;nc|ENSG00000151366|O95298-3|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 10.150570793230772 0.5619192000662246 2 {I|L} 1 8 13.099 0.0 0.0 1.1066 0.0 0.0 1052.5627667252422 0.0 1052.5627667252422 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1066 + + 338 + 1 1.88 134344.7 1.0 2588 3367 5946 DOHH2_400M_050219_2,5957 DOHH2_400M_050219_2,5957,RRNPEPLRF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5958 31.625 282.0 557820.0 25 0 42421.0 + 32776 SEEAEIIRKY 10 109 619.3247979591653 1236.6350429851304 2 619.3249389529228 MULTI CID FTMS 0 0 0 5946 342763.21875 0.6640080530270619 -1 0.059579849243164 12 Unmodified _SEEAEIIRKY_ ENSG00000143799|ENST00000366794|PARP1;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;ENST00000490921.5_1_1:226549163-226553858:-|nuORF 114.4966697963812 0.0011126474287728 2 SEEAE{I|L}{I|L}RKY 10 0 + 124.16 0.0 0.0 10.04 10.04 92.864 0.0 0.0 0.0 75.94960604426065 12.908719946578302 12.908719946578302 9.164539485499247 0 2.9802046884880937 1.6989700043360187 1.1989700043360187 0.2887254899964357 + + SEEAE{I|L}{I|L}RKY;SEEAE{I|L}{I|L}[VG]KY;SEEVVD{I|L}RKY;SEEVVD{I|L}[VG]KY;{[ES]|[DT]|[{I|L}C]}EAE{I|L}{I|L}RKY;EESAE{I|L}{I|L}RKY;EEASE{I|L}{I|L}RKY;QQC(Carbamidomethyl (C))E{I|L}{I|L}RKY;{[ET]|[MV]}DAE{I|L}{I|L}RKY;QQ[CG]E{I|L}{I|L}RKY 10.04;9.2992;7.3111;6.57;5.9644;5.9189;4.9921;4.984;4.5862;4.2394 +;-;-;-;+;-;-;-;-;- + 562 + 1 1.88 118208.2 1.0 2589 3367 5946 DOHH2_400M_050219_2,5958 DOHH2_400M_050219_2,5958,SEEAEIIRKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5959 31.629 173.0 462660.0 25 0 22846.0 + 30477 REATGKITF 9 109 511.7848345488263 1021.5551161644526 2 511.7848998904228 MULTI CID FTMS 0 0 0 5946 284799.21875 1.0 0 0.0 13 Unmodified _REATGKITF_ ENSG00000153140|ENST00000283122|CETN3 38.17557092003332 0.0854718145212029 2 [{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}GK{I|L}T{M(Oxidation (M))|F} 9 4 + 58.342 0.0 0.0 5.7111 5.7111 79.335 0.0 0.0 0.0 12.956349637772746 41.43053421393809 12.956349637772746 3.4678748622465605 0 0.8494850021680094 1.2218487496163564 0.7059771852360797 0.4247425010840047 [{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}GK{I|L}T{M(Oxidation (M))|F};[{I|L}T]{[WN]|[YH]}K{I|L}T{M(Oxidation (M))|F};[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}GKT{I|L}{M(Oxidation (M))|F};[TA]{[RE]|[WV]}GK{I|L}T{M(Oxidation (M))|F};[{I|L}T]{[WN]|[YH]}KT{I|L}{M(Oxidation (M))|F};[{I|L}A]{[WS]|[C(Carbamidomethyl (C)){I|L}]}GK{I|L}T{M(Oxidation (M))|F};{[CP]|[EA]}[WK]K{I|L}T{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}[Q{I|L}]GK{I|L}T{M(Oxidation (M))|F};[TA]{[RE]|[WV]}GKT{I|L}{M(Oxidation (M))|F};[TA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}P]{I|L}T{M(Oxidation (M))|F} 5.7111;5.3716;4.1647;4.0703;3.8252;3.7533;3.5862;3.5361;2.524;2.4084 -;-;-;-;-;-;-;-;-;- 434 1 1.88 67937.2 1.0 2590 3367 5946 DOHH2_400M_050219_2,5959 DOHH2_400M_050219_2,5959,REATGKITF True True REATGKITF 31.629484 511.784899890423 1483950.0 5946.0 ENSG00000153140|ENST00000283122|CETN3 5.066510359446208 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5960 31.643 800.0 214090.0 25 0 17716.0 + 18988 LDGLDFWPV 9 175 531.2686927687832 1060.5228326043664 2 531.2673828005791 MULTI CID FTMS 0 0 0 5946 154409.734375 0.7797286334163541 2 -0.2319469451904297 14 Unmodified _LDGLDFWPV_ REV__ENST00000466991.5_1_22:32000566-32002358:+|nuORF 28.486842064014134 0.1687311288560894 2 {I|L}EP[CS]{I|L}{[CP]|[EA]}TV 10 -1 + 50.825 0.0 0.0 4.7924 4.7924 74.427 0.0 0.0 0.0 4.771212547196626 2.596373105057552 2.596373105057552 2.596373105057552 0 0.25 2.0 0.7134679910804405 0.0 {I|L}EP[CS]{I|L}{[CP]|[EA]}TV;{I|L}EP[CS]{I|L}{[CP]|[EA]}S{I|L};E{I|L}P[CS]{I|L}{[CP]|[EA]}TV;{I|L}EP{[{M(Oxidation (M))|F}C]|[YS]}[RP]TV;{I|L}EP[CS]{I|L}[DV]SV;{I|L}EP{[{M(Oxidation (M))|F}C]|[YS]}V[PG]TV;E{I|L}P[CS]{I|L}{[CP]|[EA]}S{I|L};{I|L}EP[WY][PG]TV;{I|L}EV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}RNAV;{I|L}EP{[{M(Oxidation (M))|F}C]|[YS]}[RP]S{I|L} 4.7924;4.5476;4.3425;4.1881;4.1509;4.1449;4.0977;4.0967;3.9735;3.9433 -;-;-;-;-;-;-;-;-;- 2331 + 1 1.88 135180.0 0.7400000095367432 2591 3367 5946 DOHH2_400M_050219_2,5960 DOHH2_400M_050219_2,5960,LDGLDFWPV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5961 31.657 800.0 225560.0 25 0 29920.0 + 23698 LTTGTRIR 8 176 459.2802203019234 0 459.2799560427666 PEAK CID FTMS 0 0 0 5946 117601.296875 0.1855136450998258 4 -0.4230022430419922 15 Unmodified _LTTGTRIR_ REV__ENSG00000142661|ENST00000374434|MYOM3;REV__nc|ENSG00000142661|Q5VTT5-3|MYOM3 5.230669730166228 0.5807325378471833 2 S 1 -1 7.2185 0.0 0.0 0.78758 0.0 0.0 457.31442512357495 369.1806124322876 826.4950375558625 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 S 0.78758 - 36 + 1 1.88 143252.8 0.6200000047683716 2592 3367 5946 DOHH2_400M_050219_2,5961 DOHH2_400M_050219_2,5961,LTTGTRIR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5962 31.671 800.0 144330.0 25 0 7216.4 -1 MDNITRQNQFY 11 116 744.3311581143555 0 744.3265869021416 PEAK CID FTMS 0 0 0 5946 114268.3828125 1.0 0 0.0 16 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 13.042465956692816 0.4221659143281722 2 ANQQAED 7 -1 55.393 0.0 0.0 3.7261 0.0 0.0 328.14072447647214 399.1785677545532 727.3192922310253 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 1.2302046884880935 ANQQAED 3.7261 - 2565 + 1 1.88 86687.1 0.7200000286102295 2593 3367 5946 DOHH2_400M_050219_2,5962 DOHH2_400M_050219_2,5962,MDNITRQNQFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5963 31.675 140.0 683320.0 25 0 145590.0 + 25222 MVAPRASL 8 86 422.7389235272461 843.4632941212923 2 422.7386047244072 MULTI CID FTMS 0 0 0 5946 108901.265625 0.1359112582495279 -1 0.059579849243164 17 Unmodified _MVAPRASL_ ENST00000310999.11_1_11:66206256-66206292:-|nuORF 32.30548876998284 0.3644845974844379 2 MVAP[WK]{I|L} 7 3 + 59.324 0.0 0.0 7.0334 7.0334 79.699 0.0 0.0 0.0 30.68195177570192 0.5116183827141185 0.5116183827141185 0.5116183827141185 0 0.8494850021680094 2.0 0.0 0.3252574989159953 MVAP[WK]{I|L};MVA{I|L}K[WP];MVA{I|L}{[SA]|[TG]}[RP];MV{I|L}AK[WP];MV{I|L}[QT][RP];MV{I|L}A{[SA]|[TG]}[RP];MVRR[WP];{[ET]|[MV]}AK{I|L}[WP];{[VA]|[{I|L}G]}MK{I|L}[WP];{[ET]|[MV]}RR[WP] 7.0334;6.9727;6.8736;6.823;6.5166;6.0419;5.7991;2.4677;2.2116;1.9474 -;-;-;-;-;-;-;-;-;- 151 + 1 1.88 82755.2 1.0 2594 3367 5946 DOHH2_400M_050219_2,5963 DOHH2_400M_050219_2,5963,MVAPRASL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5964 31.689 800.0 54616.0 25 0 3129.3 + -1 NQWLRFMMMYT 11 75 776.8405442968331 0 776.8408691287041 PEAK CID FTMS 0 0 0 5946 111912.484375 1.0 0 0.0 18 2 Oxidation (M) _NQWLRFM(Oxidation (M))M(Oxidation (M))MYT_ REV__ENSG00000023171|ENST00000635736|GRAMD1B;REV__ENST00000532581.5_1_11:123431173-123490076:+|nuORF;REV__nc|ENSG00000023171|Q3KR37-2|GRAMD1B;REV__nc|ENSG00000023171|Q3KR37-4|GRAMD1B;REV__nc|ENSG00000023171|Q3KR37|GRAMD1B 1.3295316138638542 0.4761840153648598 2 ADQ 3 -1 21.555 0.0 0.0 1.3891 0.0 0.0 328.139952566625 906.3672515094562 1234.5072040760813 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 ADQ 1.3891 - 83 + 1 1.88 35466.5 0.5199999809265137 2595 3367 5946 DOHH2_400M_050219_2,5964 DOHH2_400M_050219_2,5964,NQWLRFMMMYT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5966 31.695 109.0 310570.0 25 0 38734.0 + 8490 ETDHINQIGY 10 56 595.277813641868 1188.5410743505358 2 595.2779418826103 MULTI CID FTMS 0 0 0 5965 321522.46875 0.1822124966368842 2 -0.2531013488769531 1 Unmodified _ETDHINQIGY_ ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23 27.628801355627647 0.3479284626772844 2 {I|L}QN{I|L}[WD]Y 7 8 45.578 0.0 0.0 3.8348 0.0 0.0 238.09278441088583 0.0 238.09278441088583 0.0 40.09327598502338 0.0 0.0 0 0.5 0.0 1.1861818737241734 0.0 {I|L}QN{I|L}[WD]Y 3.8348 - 44 + 1 1.865 32156.7 1.0 2596 3368 5965 DOHH2_400M_050219_2,5966 DOHH2_400M_050219_2,5966,ETDHINQIGY False True ETDHINQIGY 31.694586 595.27794188261 20253336.0 5965.0 nc|ENSG00000112282|Q9ULK4-2|MED23;;nc|ENSG00000112282|Q9ULK4-3|MED23;;nc|ENSG00000112282|Q9ULK4-5|MED23;;ENSG00000112282|ENST00000368068|MED23;;nc|ENSG00000112282|Q9ULK4-4|MED23 7.063899199167888 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5967 31.696 46.0 1045200.0 25 0 102740.0 + 709 AEPARPDITY 10 72 566.7845028456667 1131.5544527581333 2 566.7854492068291 MULTI CID FTMS 0 0 0 5965 678522.8125 0.4808062623175889 1 -0.0974082946777343 2 Unmodified _AEPARPDITY_ ENSG00000106153|ENST00000395422|CHCHD2;ENST00000473095.1_1_7:56170554-56174106:-|nuORF 18.373094154950223 0.5392593366289069 2 YY[{I|L}P]{[CP]|[EA]}{I|L}TY 9 5 YY[{I|L}P]{[CP]|[EA]}{I|L} + + 21.198 -9.2967 -1.0945 1.8733 1.8733 47.333 0.0 0.0 0.0 0.0 1.2763625255165325 0.0 0.0 0 0.5 0.0 0.0 0.0 YY[{I|L}P]{[CP]|[EA]}{I|L}TY 1.8733 - 68 + 1 1.865 42673.7 1.0 2597 3368 5965 DOHH2_400M_050219_2,5967 DOHH2_400M_050219_2,5967,AEPARPDITY False True AEPARPDITY 31.69585 566.785449206829 9095665.0 5965.0 ENSG00000106153|ENST00000395422|CHCHD2;;ENST00000473095.1_1_7:56170554-56174106:-|nuORF 3.328097422917684 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5968 31.697 34.0 2232700.0 25 0 337710.0 + 16112 ITSSAVTTALK 11 85 546.3189581915045 1090.623363449809 2 546.3192016482353 MULTI CID FTMS 0 0 0 5965 1900050.0 0.1548129509521479 -1 0.1345386505126953 3 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 48.07275321834293 0.1283031204265279 2 {I|L}TSSAVTTA{I|L}K 11 0 + 101.39 0.0 0.0 9.2969 9.2969 99.383 0.0 0.0 0.0 80.84621011180658 12.627980414712326 12.627980414712326 89.00815191844534 0 0.4247425010840047 2.0 0.805462187404089 0.1861818737241735 + + {I|L}TSSAVTTA{I|L}K;[VP]V[H{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[VP] 9.2969;1.1357 +;- + 264 + 1 1.865 62413.3 1.0 2598 3368 5965 DOHH2_400M_050219_2,5968 DOHH2_400M_050219_2,5968,ITSSAVTTALK False True False False splicing PXD020620_cell_line DOHH2_400M_050219_2 5969 31.699 71.0 741810.0 25 0 53442.0 + -1 SEEAEIIRKY 10 78 413.2156294766432 412.20835301004325 1 413.2186462283134 MULTI CID FTMS 0 0 0 5965 600737.625 1.0 0 0.0 4 ENST00000490921.5_1_1:226549163-226553858:-|nuORF;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;ENSG00000143799|ENST00000366794|PARP1 2 EEA 3 -1 19.169 0.0 0.0 4.6503 0.0 0.0 0.0 80.06211822904638 80.06211822904638 6.866468801962551 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.7742275032520141 0.0 EEA 4.6503 - 27 1 1.865 48760.3 1.0 2599 3368 5965 DOHH2_400M_050219_2,5969 DOHH2_400M_050219_2,5969, False False SEEAEIIRKY 31.698696 413.218646228313 6345133.25 5965.0 ENST00000490921.5_1_1:226549163-226553858:-|nuORF;;ENST00000413631.1_1_13:111591276-111591579:+|nuORF;;ENSG00000143799|ENST00000366794|PARP1 6.596140384674072 3.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5970 31.7 79.0 650120.0 25 0 54597.0 + 23114 AEAPRLAEY 9 91 509.7638235790971 1017.5130942249942 2 510.2614623904228 MULTI CID FTMS 0 0 0 5965 562465.1875 0.5903050819886116 -3 0.2369136810302734 5 Unmodified _LSPDPKAQY_ nc|ENSG00000075856|Q15020-4|SART3;ENSG00000075856|ENST00000546815|SART3;nc|ENSG00000075856|Q15020-2|SART3 9.38312468134398 0.5871240394367778 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[PA]QA[YQ] 9 4 + 18.54 0.0 0.0 1.8221 1.8221 75.825 0.0 0.0 0.0 3.935618660022872 -15.45757490560676 -15.45757490560676 9.208187539523752 0 0.0 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[PA]QA[YQ];{NN|[MP]|[D{I|L}]|[EV]}{I|L}[PA][AG]A[YQ] 1.8221;0.91709 -;- 71 1 1.865 44327.4 1.0 2600 3368 5965 DOHH2_400M_050219_2,5970 DOHH2_400M_050219_2,5970,LSPDPKAQY False False AEAPRLAEY 31.700492 510.261462390423 1278107.375 5965.0 nc|ENSG00000075856|Q15020-4|SART3;;ENSG00000075856|ENST00000546815|SART3;;nc|ENSG00000075856|Q15020-2|SART3 6.19094451268514 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5971 31.702 90.0 1071500.0 25 0 185710.0 + 20231 LLDEHHISY 9 106 376.18886026834014 1125.5447514052205 3 376.1882812380791 MULTI CID FTMS 0 0 0 5965 549487.9375 0.2322647493731197 -1 0.1345386505126953 6 Unmodified _LLDEHHISY_ ENSG00000100014|ENST00000314328|SPECC1L;nc|ENSG00000100014|Q69YQ0-2|SPECC1L 36.506200033944 0.094635877243972 2 {I|L}{I|L}[HM]{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY 9 5 + 59.459 0.0 0.0 5.2827 5.2827 87.126 0.0 0.0 0.0 -7.64645333192 14.973024840566469 -7.64645333192 14.559771852360797 0 0.2302046884880938 1.5228787452803376 0.3054621874040891 0.0 {I|L}{I|L}[HM]{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}S{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{I|L}{I|L}[HM]{I|L}HM[MT];{I|L}HM{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{I|L}{I|L}[HM]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}RY;{I|L}{I|L}[HM]H{I|L}M[MT];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}D{I|L}{I|L}D{[HG]|PP}Y;{I|L}{I|L}[QA]D[{M(Oxidation (M))|F}T]RY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D{I|L}D{[HG]|PP}Y 5.2827;3.9891;3.8351;3.7851;3.6196;3.477;3.3612;2.9857;2.9827;2.8723 -;-;-;-;-;-;-;-;-;- 656 + 1 1.865 82284.5 1.0 2601 3368 5965 DOHH2_400M_050219_2,5971 DOHH2_400M_050219_2,5971,LLDEHHISY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5972 31.705 106.0 899460.0 25 0 133410.0 + 20232 LLDEHHISY 9 96 563.7800952473524 1125.5456375615047 2 563.7800781130791 MULTI CID FTMS 0 0 0 5965 535328.4375 0.2064528962996643 -1 0.1345386505126953 7 Unmodified _LLDEHHISY_ ENSG00000100014|ENST00000314328|SPECC1L;nc|ENSG00000100014|Q69YQ0-2|SPECC1L 89.40071534611396 0.0152361884002446 2 {I|L}{I|L}[HM]{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY 9 5 + 70.401 0.0 0.0 6.2549 6.2549 90.41 0.0 0.0 0.0 30.88476776939273 12.95371572735597 12.95371572735597 12.95371572735597 0 0.7302046884880937 2.0 0.899649864804614 0.0 {I|L}{I|L}[HM]{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;{I|L}{I|L}[HM]{I|L}HM[MT];[HM]{I|L}{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;[HM]{I|L}{I|L}{I|L}HM[MT];[HM]{I|L}H{I|L}{I|L}M[MT] 6.2549;5.104;3.3838;3.0154;1.247 -;-;-;-;- 541 + 1 1.865 76995.8 1.0 2602 3368 5965 DOHH2_400M_050219_2,5972 DOHH2_400M_050219_2,5972,LLDEHHISY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5973 31.707 125.0 592520.0 25 0 78287.0 + 13884 HVPEHAVVL 9 72 500.7825017365613 999.5504505399224 2 500.7828552126884 MULTI CID FTMS 0 0 0 5965 506521.34375 0.3648969475207189 7 -0.5049381256103516 8 Unmodified _HVPEHAVVL_ ENSG00000169710|ENST00000306749|FASN 21.74664581756881 0.2544899275067181 2 [HV][EP]HAVV{I|L} 9 0 + 39.06 0.0 0.0 3.9078 3.9078 71.773 0.0 0.0 0.0 10.20181229336984 21.6474844613388 10.20181229336984 3.0102999566398125 0 0.4957416651753049 2.0 0.0 0.0 + + [HV][EP]HAVV{I|L};[HV][EP]AHVV{I|L};[HV][EP]AVHV{I|L};[HV][TP][TP]HV{I|L};[HA][EP]VHVV{I|L};[HV][{M(Oxidation (M))|F}V]{[WT]|[RM]}V{I|L};[HA][EP]VVHV{I|L};[HA][YK][NG]VV{I|L};VV{[{M(Oxidation (M))|F}H]|[RQ]}{[WT]|[RM]}V{I|L} 3.9078;3.6066;3.1293;2.1569;2.0319;1.8891;1.5545;0.75829;0.49935 +;-;-;-;-;-;-;-;- + 234 1 1.865 61747.1 1.0 2603 3368 5965 DOHH2_400M_050219_2,5973 DOHH2_400M_050219_2,5973,HVPEHAVVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5974 31.712 235.0 357730.0 25 0 33430.0 + 23317 LTALAICK 8 110 416.75143945147374 831.4883259697475 2 416.7515746951103 MULTI CID FTMS 0 0 0 5965 272140.21875 1.0 0 0.0 9 Unmodified _LTALAICK_ ENST00000484500.5_1_3:125642568-125642902:+|nuORF 19.438996006549623 0.6237395211498085 2 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]T{M(Oxidation (M))|F}K 7 5 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]T + + 23.315 2.2746 0.42252 2.8041 2.8041 48.558 0.0 0.0 0.0 0.0 12.602131414518922 0.0 0.0 0 0.5 0.0 0.0 0.2742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]T{M(Oxidation (M))|F}K 2.8041 - 290 + 1 1.865 68623.8 1.0 2604 3368 5965 DOHH2_400M_050219_2,5974 DOHH2_400M_050219_2,5974,LTALAICK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 5975 31.726 800.0 255740.0 25 0 14198.0 6772 EEADWIYRNAF 11 160 707.3239081525395 1412.633263371879 2 707.3232299685478 MULTI CID FTMS 0 0 0 5965 208503.78125 0.485563092692619 -1 0.1345386505126953 10 Unmodified _EEADWIYRNAF_ ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 31.26834338654808 0.3580123756476716 2 {[QG]|[NA]}{M(Oxidation (M))|F}EHHAQQNA{M(Oxidation (M))|F} 12 9 + 100.47 0.0 0.0 7.1122 7.1122 80.229 0.0 0.0 0.0 0.6857177957124065 16.611814434466197 0.6857177957124065 0.6857177957124065 0 1.7346368802282015 1.5228787452803376 1.285666875892183 1.8996498648046136 {[QG]|[NA]}{M(Oxidation (M))|F}EHHAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};[AG]NA{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};[AG]GQ{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{M(Oxidation (M))|F}HHEAQQNA{M(Oxidation (M))|F};[AG]G{M(Oxidation (M))|F}EHHAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{M(Oxidation (M))|F}EHHA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}{M(Oxidation (M))|F}EHHAQQGGA{M(Oxidation (M))|F} 7.1122;7.0637;6.972;6.6972;6.6545;6.5121;6.5037;6.4959;6.4681;6.4681 -;-;-;-;-;-;-;-;-;- 19392 1 1.865 144648.8 0.8500000238418579 2605 3368 5965 DOHH2_400M_050219_2,5975 DOHH2_400M_050219_2,5975,EEADWIYRNAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5976 31.733 389.0 208610.0 25 0 27366.0 -1 IPMMYQQGEFY 11 95 711.8045935400446 1421.5946341468891 2 712.3030273318291 MULTI CID FTMS 0 0 0 5965 203116.84375 0.1927033704046257 5 -0.4353351593017578 11 Oxidation (M) _IPM(Oxidation (M))MYQQGEFY_ ENSG00000163536|ENST00000446050|SERPINI1 8.745405648335112 0.8338865417133445 2 [HD]EAQAENQA[Y{M(Oxidation (M))|F}] 12 -1 + 67.145 0.0 0.0 4.7232 4.7232 73.515 0.0 0.0 0.0 2.04119982655925 7.2184874961635614 2.04119982655925 2.04119982655925 0 0.5 0.0 0.3807196863200844 0.8494850021680094 [HD]EAQAENQA[Y{M(Oxidation (M))|F}];[QA]HDEAENQA[Y{M(Oxidation (M))|F}];[HD]EAQAQDQA[Y{M(Oxidation (M))|F}];[HD]EAQAEQNA[Y{M(Oxidation (M))|F}];[QA]HDEAQDQA[Y{M(Oxidation (M))|F}];[QA]HDEAEQNA[Y{M(Oxidation (M))|F}];[HD]EAQAQENA[Y{M(Oxidation (M))|F}];[QA]HDEAQENA[Y{M(Oxidation (M))|F}];[HD]EAQAEN[AG]A[Y{M(Oxidation (M))|F}];[HD]EA[AG]AENQA[Y{M(Oxidation (M))|F}] 4.7232;4.5796;4.5115;4.4468;4.3679;4.3032;4.235;4.0914;4.0832;4.0832 -;-;-;-;-;-;-;-;-;- 1784 1 1.865 63256.5 1.0 2606 3368 5965 DOHH2_400M_050219_2,5976 DOHH2_400M_050219_2,5976,IPMMYQQGEFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5977 31.735 118.0 350800.0 25 0 31853.0 + -1 MSTASAPRIY 10 74 556.7733631499239 0 556.7720825076103 PEAK CID FTMS 0 0 0 5965 152887.515625 1.0 0 0.0 12 Oxidation (M) _M(Oxidation (M))STASAPRIY_ REV__ENSG00000112462|ENST00000396806|OR12D3 9.38312468134398 0.3794934366477728 2 DQ{M(Oxidation (M))|F}P 4 -1 12.907 0.0 0.0 1.1612 0.0 0.0 238.13387121996635 383.1690767877563 621.3029480077226 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DQ{M(Oxidation (M))|F}P 1.1612 - 60 + 1 1.865 38053.2 1.0 2607 3368 5965 DOHH2_400M_050219_2,5977 DOHH2_400M_050219_2,5977,MSTASAPRIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5978 31.739 185.0 329910.0 25 0 59882.0 + 16001 ITDSLSEIVY 10 74 570.2940458418067 1138.5735387504133 2 570.2927123904228 MULTI CID FTMS 0 0 0 5965 150350.28125 1.0 0 0.0 13 Unmodified _ITDSLSEIVY_ REV__ENSG00000130943|ENST00000253255|PKDREJ 20.453626601364224 0.5043500229302764 2 [{I|L}T]H[NP]PAQVY 10 -1 + 56.08 0.0 0.0 4.9255 4.9255 82.366 0.0 0.0 0.0 14.789784572998173 14.789784572998173 14.789784572998173 9.164539485499256 0 0.5 1.3979400086720375 0.4247425010840047 0.0 [{I|L}T]H[NP]PAQVY;[{I|L}T]H[NP]PA[AG]VY;[{I|L}V]EPEYQVY;[{I|L}V]EPEYGH[VP];[{I|L}T]HGYE[HA][{I|L}V];[{I|L}T]H[NP][WC(Carbamidomethyl (C))][{I|L}V] 4.9255;4.1206;3.6265;1.256;0.83923;0.5338 -;-;-;-;-;- 151 1 1.865 52944.3 1.0 2608 3368 5965 DOHH2_400M_050219_2,5978 DOHH2_400M_050219_2,5978,ITDSLSEIVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5979 31.748 514.0 218440.0 25 0 23191.0 + -1 EDNFLMCYY 9 100 635.7411380410597 0 635.7417480349541 PEAK CID FTMS 0 0 0 5965 127112.125 1.0 0 0.0 14 Carbamidomethyl (C),Oxidation (M) _EDNFLM(Oxidation (M))C(Carbamidomethyl (C))YY_ REV__ENSG00000024048|ENST00000372901|UBR2;REV__nc|ENSG00000024048|Q8IWV8-2|UBR2;REV__nc|ENSG00000024048|Q8IWV8|UBR2 2.302733041254933 0.3444685223463735 2 EEK{M(Oxidation (M))|F} 4 -1 17.423 0.0 0.0 1.3724 0.0 0.0 449.02014591503263 284.1737154596313 733.1938613746639 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EEK{M(Oxidation (M))|F} 1.3724 - 179 + 1 1.865 88678.1 1.0 2609 3368 5965 DOHH2_400M_050219_2,5979 DOHH2_400M_050219_2,5979,EDNFLMCYY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5980 31.751 107.0 955520.0 25 0 171870.0 -1 0 82 514.2293449671222 513.2220685005221 1 514.2294189333916 MULTI CID FTMS 0 0 0 5965 598838.0625 0.7063503203542733 -1 0.1345386505126953 15 2 {[QG]|[NA]}{M(Oxidation (M))|F}Y 4 -1 + 54.932 0.0 0.0 10.703 10.703 97.837 0.0 0.0 0.0 11.287274539022654 11.287274539022654 11.287274539022654 21.031511926785747 0 0.805462187404089 1.5228787452803376 0.0 0.5451140161145328 {[QG]|[NA]}{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NY;{[MS]|[{M(Oxidation (M))|F}A]}GGY;{[QD]|[EN]|[WG]|[KD]|[RS]}[HD] 10.703;6.6055;3.9698;0.089157 -;-;-;- 31 1 1.865 83083.6 1.0 2610 3368 5965 DOHH2_400M_050219_2,5980 DOHH2_400M_050219_2,5980, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5981 31.759 426.0 201490.0 25 0 41661.0 + 6833 EECSKHENY 9 116 380.15366479687697 0 379.8764831423759 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _EECSKHENY_ REV__ENSG00000179335|ENST00000395066|CLK3;REV__ENST00000454830.6_1_15:74914310-74922221:+|nuORF;REV__ENST00000562078.5_1_15:74917060-74922221:+|nuORF;REV__ENST00000569406.5_1_15:74914809-74922221:+|nuORF;REV__nc|ENSG00000179335|P49761-3|CLK3 2.059750862983233 0.3444685223463734 2 S 1 -1 0.83746 0.0 0.0 0.11044 0.0 0.0 566.1772046164118 102.05673395328358 668.2339385696954 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.11044 + + 4 + 1 1.865 73200.3 1.0 2611 3368 5965 DOHH2_400M_050219_2,5981 DOHH2_400M_050219_2,5981,EECSKHENY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5982 31.772 800.0 280610.0 25 0 15243.0 + 19042 LDLVRLSRL 9 259 362.232977918043 0 362.2326843142509 PEAK CID FTMS 0 0 0 5965 142564.5 1.0 0 0.0 17 Unmodified _LDLVRLSRL_ REV__ENSG00000144749|ENST00000273261|LRIG1;REV__nc|ENSG00000144749|Q96JA1-2|LRIG1 14.218169984304629 0.2638849228800161 2 E 1 -1 8.2268 0.0 0.0 1.1387 0.0 0.0 137.19047770835783 453.1928194635376 590.3832971718954 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E 1.1387 - 13 + 1 1.865 174646.4 0.5699999928474426 2612 3368 5965 DOHH2_400M_050219_2,5982 DOHH2_400M_050219_2,5982,LDLVRLSRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5983 31.786 800.0 113160.0 25 0 7217.3 + -1 FCVCFFKFPFY 11 92 781.3553709939615 1560.696189054723 2 781.8550292849541 MULTI CID FTMS 0 0 0 5965 122744.265625 0.982027899845976 -1 0.1345386505126953 18 2 Carbamidomethyl (C) _FC(Carbamidomethyl (C))VC(Carbamidomethyl (C))FFKFPFY_ REV__ENST00000474340.1_1_9:95003027-95004705:-|nuORF 6.2057823575117 0.8458686499021061 2 QHDEAQQNA{M(Oxidation (M))|F}Y 11 -1 67.542 0.0 0.0 4.3277 0.0 0.0 211.13270766425936 0.0 211.13270766425936 0.0 40.98986468418917 0.0 0.0 0 0.7742275032520141 0.0 0.805462187404089 0.8494850021680094 QHDEAQQNA{M(Oxidation (M))|F}Y 4.3277 - 722 1 1.865 67761.5 0.6700000166893005 2613 3368 5965 DOHH2_400M_050219_2,5983 DOHH2_400M_050219_2,5983,FCVCFFKFPFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5985 31.791 63.0 793340.0 25 0 77855.0 + + 19147 MENIHSEMY 9 75 577.2854277939053 1152.5563026546106 2 577.2858154177666 MULTI CID FTMS 0 0 0 5984 142847.203125 0.1326730384949744 2 -0.1910552978515625 1 Unmodified _LEAKMNERY_ ENSG00000171848|ENST00000304567|RRM2;nc|ENSG00000171848|P31350-2|RRM2;ENST00000491447.1_1_2:10262886-10264978:+|nuORF 10.823927491677226 0.5436922275383211 2 MEMSP{[QS]|[NT]}Y 8 -1 47.428 0.0 0.0 4.115 0.0 0.0 181.16648439464808 0.0 181.16648439464808 0.0 32.99085977895906 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 MEMSP{[QS]|[NT]}Y 4.115 - 923 + 1 1.847 44695.5 1.0 2614 3369 5984 DOHH2_400M_050219_2,5985 DOHH2_400M_050219_2,5985,LEAKMNERY False False MENIHSEMY 31.791231 577.285815417767 22930312.0 5984.0 ENSG00000171848|ENST00000304567|RRM2;;nc|ENSG00000171848|P31350-2|RRM2;;ENST00000491447.1_1_2:10262886-10264978:+|nuORF 9.216593742370604 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5986 31.801 564.0 333510.0 25 0 71797.0 -1 DSMESLSY 8 150 474.1878671707185 946.3611814082368 2 474.1876708865166 MULTI CID FTMS 0 0 0 5984 122202.4296875 0.2814112677266539 2 -0.1910552978515625 2 Oxidation (M) _DSM(Oxidation (M))ESLSY_ ENSG00000160219|ENST00000424127|GAB3;ENST00000496390.5_1_X:153928333-153979808:-|nuORF;nc|ENSG00000160219|Q8WWW8-3|GAB3;nc|ENSG00000160219|Q8WWW8|GAB3 14.581692164780916 0.6954967302934248 2 GSY 3 -1 26.995 0.0 0.0 2.8525 0.0 0.0 621.2295723767901 0.0 621.2295723767901 0.0 13.511287767406229 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 GSY 2.8525 - 241 + 1 1.847 145770.8 1.0 2615 3369 5984 DOHH2_400M_050219_2,5986 DOHH2_400M_050219_2,5986,DSMESLSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5987 31.802 48.0 792350.0 25 0 109290.0 + 20300 LLEDKHFQSY 10 66 640.3192226186035 1278.6238923040069 2 640.3196288943291 MULTI CID FTMS 0 0 0 5984 1028212.6875 1.0 0 0.0 3 Unmodified _LLEDKHFQSY_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 35.61225514009592 0.2039006631696762 2 {I|L}{I|L}ERE{M(Oxidation (M))|F} 6 6 63.621 0.0 0.0 4.9757 0.0 0.0 0.0 488.1916292779906 488.1916292779906 41.41441272380455 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {I|L}{I|L}ERE{M(Oxidation (M))|F} 4.9757 - 394 + 1 1.847 34648.8 1.0 2616 3369 5984 DOHH2_400M_050219_2,5987 DOHH2_400M_050219_2,5987,LLEDKHFQSY False True LLEDKHFQSY 31.80241 640.319628894329 6112474.0 5984.0 ENST00000420783.7_1_3:49044839-49051550:+|nuORF;;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;;ENST00000489684.2_1_3:49044864-49050780:+|nuORF;;ENSG00000178252|ENST00000608424|WDR6 8.502448399861654 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5988 31.804 55.0 908950.0 25 0 108510.0 + 24354 MENIHSEMY 9 78 577.235961390303 1152.457369847406 2 577.2364379763603 MULTI CID FTMS 0 0 0 5984 999483.8125 0.5457035489117932 -1 0.0974082946777343 4 Unmodified _MENIHSEMY_ ENSG00000171848|ENST00000304567|RRM2;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 43.77239144664712 0.0547478964384323 2 [H{I|L}]NESMEMY 9 5 + 45.582 0.0 0.0 3.9552 3.9552 73.74 0.0 0.0 0.0 2.922152515121219 27.62288505487369 2.922152515121219 4.528937514676485 0 0.8182503180159344 0.0 1.174742501084005 0.0 [H{I|L}]NESMEMY;[H{I|L}]NESEMMY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{I|L}HSEMY;{[ES]|[DT]|[{I|L}C]}H{[QV]|[N{I|L}]|[RA]|[KV]}MEMY;[HS]E{[QV]|[N{I|L}]|[RA]|[KV]}MEMY;{[ES]|[DT]|[{I|L}C]}H{[QV]|[N{I|L}]|[RA]|[KV]}EMMY;[H{I|L}]GGESMEMY;[H{I|L}]NEMSEMY;[HS]E{[QV]|[N{I|L}]|[RA]|[KV]}EMMY;{[ES]|[DT]|[{I|L}C]}HM{[QV]|[N{I|L}]|[RA]|[KV]}EMY 3.9552;3.5622;3.5596;3.5495;3.3967;3.1565;3.1562;3.0642;3.0037;2.9198 -;-;+;-;-;-;-;-;-;- + 510 1 1.847 46141.6 1.0 2617 3369 5984 DOHH2_400M_050219_2,5988 DOHH2_400M_050219_2,5988,MENIHSEMY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5989 31.805 59.0 948590.0 25 0 72299.0 + + 5420 AESIVVHTY 9 99 509.29123984829664 1016.5679267633932 2 509.2914611697197 MULTI CID FTMS 0 0 0 5984 683968.4375 1.0 0 0.0 5 Unmodified _DLLPRIQY_ ENSG00000124207|ENST00000262982|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L 23.1484247019978 0.5573009939494978 2 D{I|L}{I|L}{I|L}K 5 -1 65.701 0.0 0.0 6.463 0.0 0.0 0.0 431.1725863092407 431.1725863092407 51.72167511924052 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 D{I|L}{I|L}{I|L}K 6.463 - 208 + 1 1.847 48868.0 1.0 2618 3369 5984 DOHH2_400M_050219_2,5989 DOHH2_400M_050219_2,5989,DLLPRIQY False False AESIVVHTY 31.805289 509.29146116972 11471205.0 5984.0 ENSG00000124207|ENST00000262982|CSE1L;;nc|ENSG00000124207|P55060-4|CSE1L;;nc|ENSG00000124207|P55060-3|CSE1L 3.707195202509562 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 5990 31.807 80.0 556860.0 25 0 58285.0 + 500 AEGSVAREEW 10 76 567.264501117951 1132.514449302702 2 567.2648193240166 MULTI CID FTMS 0 0 0 5984 589195.375 0.9824865028460672 1 -0.1556930541992187 6 Unmodified _AEGSVAREEW_ ENSG00000173418|ENST00000334982|NAA20;nc|ENSG00000173418|P61599-2|NAA20 30.7034409873982 0.2788461460996952 2 {[CP]|[EA]}GSVA 6 4 38.218 0.0 0.0 3.3747 0.0 0.0 0.0 615.2532836557448 615.2532836557448 20.47614693140829 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3252574989159953 0.0 + {[CP]|[EA]}GSVA 3.3747 + + 73 + 1 1.847 41216.2 1.0 2619 3369 5984 DOHH2_400M_050219_2,5990 DOHH2_400M_050219_2,5990,AEGSVAREEW False True AEGSVAREEW 31.807118 567.264819324017 4086991.0 5984.0 nc|ENSG00000173418|P61599-2|NAA20;;ENSG00000173418|ENST00000334982|NAA20 7.416669368743896 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5991 31.811 201.0 436510.0 25 0 69096.0 + 2639 ASYPGASVDNY 11 126 572.2510869999421 1142.487621066684 2 572.2509643435478 MULTI CID FTMS 0 0 0 5984 294187.25 1.0 0 0.0 7 Unmodified _ASYPGASVDNY_ ENSG00000108639|ENST00000225777|SYNGR2;ENST00000592456.1_1_17:76167504-76168014:+|nuORF 21.53697664764585 0.586507868110548 2 [QP]SVDDY 7 6 33.707 0.0 0.0 2.9503 0.0 0.0 0.0 335.1229109438904 335.1229109438904 16.72126692079697 0.0 0.0 0.0 0 0.0 0.0 1.873712505420024 0.2742275032520141 [QP]SVDDY 2.9503 - 1232 1 1.847 69908.7 1.0 2620 3369 5984 DOHH2_400M_050219_2,5991 DOHH2_400M_050219_2,5991,ASYPGASVDNY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5992 31.815 205.0 259870.0 25 0 29885.0 + 20301 LLEDKHFQSY 10 79 427.21606289093336 1278.6263592730002 3 427.2152892947197 MULTI CID FTMS 0 0 0 5984 243296.609375 1.0 0 0.0 8 Unmodified _LLEDKHFQSY_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 14.838274106304384 0.5985701837916485 2 {I|L}{I|L}EA[DN]ESY{I|L}{I|L} 11 7 + 41.936 0.0 0.0 3.2798 3.2798 73.072 0.0 0.0 0.0 15.470388621946933 23.238413546066603 15.470388621946933 6.020599913279618 0 0.3935078169319297 2.0 0.75 0.0 {I|L}{I|L}EA[DN]ESY{I|L}{I|L};{I|L}{I|L}EA[DN]SEY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}{NN|[MP]|[D{I|L}]|[EV]}ESY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}{NN|[MP]|[D{I|L}]|[EV]}SEY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}[WE]EY{I|L}{I|L} 3.2798;2.8089;1.8736;1.4028;0.88849 -;-;-;-;- 88 1 1.847 53411.6 1.0 2621 3369 5984 DOHH2_400M_050219_2,5992 DOHH2_400M_050219_2,5992,LLEDKHFQSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5993 31.829 800.0 281180.0 25 0 30664.0 + 17562 KPQNERILL 9 171 555.8350751778788 0 555.8350707888603 PEAK CID FTMS 0 0 0 5984 195910.703125 1.0 0 0.0 9 Unmodified _KPQNERILL_ REV__ENSG00000115616|ENST00000233969|SLC9A2 34.40172386719151 0.0892392376003579 2 PTG 3 -1 24.609 0.0 0.0 2.2177 0.0 0.0 128.09300308386167 723.4193819635374 851.512385047399 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3494850021680094 0.0 PTG 2.2177 - 293 + 1 1.847 170288.0 0.959999978542328 2622 3369 5984 DOHH2_400M_050219_2,5993 DOHH2_400M_050219_2,5993,KPQNERILL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 5994 31.843 800.0 381610.0 25 0 40129.0 -1 0 181 485.3337159489671 484.3264394823671 1 485.3336364626884 MULTI CID FTMS 0 0 0 5984 186308.453125 0.1777772771491658 2 -0.1910552978515625 10 2 {I|L} 1 -1 16.259 0.0 0.0 3.357 0.0 0.0 353.2313294743577 0.0 353.2313294743577 0.0 2.764209843288903 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {I|L} 3.357 - 57 + 1 1.847 235402.6 0.8899999856948853 2623 3369 5984 DOHH2_400M_050219_2,5994 DOHH2_400M_050219_2,5994, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 5995 31.856 800.0 156160.0 25 0 13398.0 19030 LDLLLEAL 8 166 450.2744821817239 898.5344114302478 2 450.2742492556572 MULTI CID FTMS 0 0 0 5984 155364.75 0.7391868942973292 1 -0.1556930541992187 11 Unmodified _LDLLLEAL_ ENSG00000203485|ENST00000392634|INF2;nc|ENSG00000203485|Q27J81-2|INF2;nc|ENSG00000203485|Q27J81-3|INF2 5.760428011301431 0.7893668129297577 2 Y 1 8 13.979 0.0 0.0 1.5558 0.0 0.0 717.4596566468479 0.0 717.4596566468479 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5558 - 77 + 1 1.847 101870.2 0.75 2624 3369 5984 DOHH2_400M_050219_2,5995 DOHH2_400M_050219_2,5995,LDLLLEAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5996 31.86 191.0 388270.0 25 0 49227.0 + 29879 QRKERLYPL 9 89 401.571587341258 1201.692932623974 3 401.5714294314384 MULTI CID FTMS 0 0 0 5984 145634.859375 0.7679700235121341 -2 0.2319469451904297 12 Unmodified _QRKERLYPL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000373570.8_1_9:127620199-127620799:-|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF 13.614867670302877 0.4681447649821485 2 TP{I|L} 3 7 26.427 0.0 0.0 2.1991 0.0 0.0 872.5094471662125 0.0 872.5094471662125 0.0 12.931825014007217 0.0 0.0 0 0.5 0.0 0.0 0.0 TP{I|L} 2.1991 - 33 1 1.847 62202.2 1.0 2625 3369 5984 DOHH2_400M_050219_2,5996 DOHH2_400M_050219_2,5996,QRKERLYPL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5997 31.866 214.0 180690.0 25 0 19533.0 13323 HLCCLIGSLF 10 86 553.2820991389653 1104.5496453447306 2 553.2823364138603 MULTI CID FTMS 0 0 0 5984 97482.09375 1.0 0 0.0 13 Unmodified _HLCCLIGSLF_ L1MA4A_dup2646|chr7:55461716-55462655:-|1.1942581510732202|0.4304615177296836|1.47|48.0|58|2|anti-sense 11.640296217721598 0.652229146672156 2 [H{I|L}]{[RE]|[WV]}WM{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 8 6 + 30.367 0.0 0.0 2.7493 2.7493 78.892 0.0 0.0 0.0 16.871987629411294 2.7962253513872035 2.7962253513872035 13.765325481467766 0 0.0 1.6989700043360187 0.2742275032520141 0.0 [H{I|L}]{[RE]|[WV]}WM{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[H{I|L}][PA][R{M(Oxidation (M))|F}]M{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 2.7493;1.503 -;- 60 1 1.847 34363.5 1.0 2626 3369 5984 DOHH2_400M_050219_2,5997 DOHH2_400M_050219_2,5997,HLCCLIGSLF False False False False ERV PXD020620_cell_line DOHH2_400M_050219_2 5998 31.867 74.0 1013800.0 25 0 215290.0 + 38932 TVLSRANSL 9 84 480.7773828977653 959.5402128623306 2 480.7770568728447 MULTI CID FTMS 0 0 0 5984 303060.03125 0.4333560216288331 -1 0.0974082946777343 14 Unmodified _TVLSRANSL_ ENSG00000129128|ENST00000503362|SPCS3;ENST00000507678.5_1_4:177241188-177241371:+|nuORF;ENST00000513139.1_1_4:177241188-177248429:+|nuORF 43.77239144664712 0.0547478964384323 2 {[TV]|[{I|L}S]}{I|L}S 4 5 46.0 0.0 0.0 4.794 0.0 0.0 0.0 556.2871187799436 556.2871187799436 32.95249045952197 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7059771852360797 0.0 + {[TV]|[{I|L}S]}{I|L}S 4.794 + + 59 + 1 1.847 61397.4 1.0 2627 3369 5984 DOHH2_400M_050219_2,5998 DOHH2_400M_050219_2,5998,TVLSRANSL True True TVLSRANSL 31.867243 480.777056872845 3745694.75 5984.0 ENST00000513139.1_1_4:177241188-177248429:+|nuORF;;ENSG00000129128|ENST00000503362|SPCS3;;ENST00000507678.5_1_4:177241188-177241371:+|nuORF 4.730782508850098 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 5999 31.871 223.0 315670.0 25 0 32285.0 -1 0 90 412.22921406649766 411.2219375998977 1 412.2202941775322 MULTI CID FTMS 0 0 0 -1 0 15 2 TE 2 -1 19.977 0.0 0.0 4.8578 0.0 0.0 163.12052571200547 0.0 163.12052571200547 0.0 15.539535799305702 0.0 0.0 0 0.0 0.0 0.5283773187068795 0.0 TE 4.8578 - 12 + 1 1.847 59554.3 1.0 2628 3369 5984 DOHH2_400M_050219_2,5999 DOHH2_400M_050219_2,5999, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6000 31.885 800.0 261790.0 25 0 34369.0 22814 LRFAASLIS 9 180 489.2925223477481 976.570491762296 2 489.2918273806572 MULTI CID FTMS 0 0 0 5984 205792.046875 0.1442557778143844 4 -0.3379268646240234 16 Unmodified _LRFAASLIS_ ENSG00000070748|ENST00000337653|CHAT;nc|ENSG00000070748|P28329-2|CHAT;nc|ENSG00000070748|P28329-3|CHAT 26.88365393820708 0.1891292719743517 2 [R{I|L}]PPP[TP]{[TV]|[{I|L}S]} 9 5 + 36.538 0.0 0.0 3.7414 3.7414 82.583 0.0 0.0 0.0 12.860980233036166 23.43880628309983 12.860980233036166 20.177287669604315 0 0.8494850021680094 1.0969100130080565 0.5 0.2742275032520141 [R{I|L}]PPP[TP]{[TV]|[{I|L}S]};[R{I|L}][YK][TP]{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}V][K{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[R{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L};[R{I|L}]{[DS]|[MA]|[CV]|TT}[R{I|L}]{[MS]|[{M(Oxidation (M))|F}A]} 3.7414;1.6753;1.4948;0.82994;0.42012 -;-;-;-;- 188 1 1.847 160091.2 0.8999999761581421 2629 3369 5984 DOHH2_400M_050219_2,6000 DOHH2_400M_050219_2,6000,LRFAASLIS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6001 31.899 800.0 70645.0 25 0 4757.4 + 10295 FRSQFERLQY 10 102 687.3497182658409 1372.6848835984815 2 687.8365966677666 MULTI CID FTMS 0 0 0 5984 28422.484375 0.3389665673205966 -4 0.3343219757080078 17 Unmodified _FRSQFERLQY_ REV__ENSG00000105131|ENST00000221730|EPHX3 8.745405648335112 0.6861838735306406 2 [AG]TM[KT]G[YR]V 10 -1 19.907 0.0 0.0 1.4502 0.0 0.0 0.0 305.1349317764693 305.1349317764693 1.1511151298148548 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.9247425010840048 0.0 [AG]TM[KT]G[YR]V 1.4502 - 401 1 1.847 45156.7 0.8700000047683716 2630 3369 5984 DOHH2_400M_050219_2,6001 DOHH2_400M_050219_2,6001,FRSQFERLQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6002 31.914 800.0 115760.0 25 0 5612.9 + -1 INREYEEMRAY 11 113 745.3392330435946 1488.6639131539891 2 746.3629638552666 MULTI CID FTMS 0 0 0 -1 0 18 Oxidation (M) _INREYEEM(Oxidation (M))RAY_ REV__ENSG00000127743|ENST00000261796|IL17B 6.2057823575117 0.8458686499021061 2 {[QV]|[N{I|L}]|[RA]|[KV]}[YE]EAEQNA 10 -1 55.766 0.0 0.0 3.7461 0.0 0.0 0.0 324.1155724194127 324.1155724194127 41.55816732341477 0.0 0.0 0.0 0 0.0 2.0 0.0 1.3882104921644451 {[QV]|[N{I|L}]|[RA]|[KV]}[YE]EAEQNA 3.7461 - 3378 1 1.847 68668.0 0.8199999928474426 2631 3369 5984 DOHH2_400M_050219_2,6002 DOHH2_400M_050219_2,6002,INREYEEMRAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6003 31.928 800.0 247500.0 25 0 12972.0 -1 0 173 649.364710219511 648.357433752911 1 649.3644897341728 MULTI CID FTMS 0 0 0 5984 115248.765625 0.3784843019183551 10 -0.6553440093994141 19 2 DY 2 -1 20.355 0.0 0.0 3.1395 0.0 0.0 352.2560549892917 0.0 352.2560549892917 0.0 2.4098135999870323 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 DY 3.1395 - 109 + 1 1.847 151039.0 0.800000011920929 2632 3369 5984 DOHH2_400M_050219_2,6003 DOHH2_400M_050219_2,6003, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6004 31.942 800.0 181770.0 25 0 10086.0 + 24352 MENIHSEMY 9 161 585.2335397252957 1168.452526517391 2 585.2344848513603 MULTI CID FTMS 0 0 0 5984 97588.09375 0.5795181981673693 -1 0.0974082946777343 20 Oxidation (M) _MENIHSEM(Oxidation (M))Y_ ENSG00000171848|ENST00000304567|RRM2;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 57.24910588100465 0.0276051374632116 2 MEN{I|L} 4 5 51.331 0.0 0.0 4.3931 0.0 0.0 0.0 678.220044530029 678.220044530029 11.156884353030064 0.0 0.0 0.0 0 1.110924374808178 2.0 0.3054621874040891 0.0 + MEN{I|L} 4.3931 + + 3138 + 1 1.847 112709.7 0.75 2633 3369 5984 DOHH2_400M_050219_2,6004 DOHH2_400M_050219_2,6004,MENIHSEMY True False MENIHSEMY 31.941776 585.23448485136 1150980.375 5984.0 ENSG00000171848|ENST00000304567|RRM2;;nc|ENSG00000171848|P31350-2|RRM2;;ENST00000491447.1_1_2:10262886-10264978:+|nuORF 7.820130666097005 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6006 31.947 74.0 1105100.0 25 0 480900.0 13752 HRTRPKVQY 9 62 395.5599427344547 1183.6579988035642 3 395.5598937869072 MULTI CID FTMS 0 0 0 6005 409993.28125 0.5371648857093374 1 -0.0353622436523437 1 Unmodified _HRTRPKVQY_ ENSG00000183117|ENST00000635120|CSMD1;nc|ENSG00000183117|Q96PZ7-2|CSMD1 2.498486711656943 0.8274632594916526 2 {M(Oxidation (M))|F} 1 9 8.4949 0.0 0.0 0.71768 0.0 0.0 652.3404305261759 381.2273348443969 1033.5677653705727 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.71768 - 7 + 1 1.839 71425.7 1.0 2634 3370 6005 DOHH2_400M_050219_2,6006 DOHH2_400M_050219_2,6006,HRTRPKVQY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6007 31.956 518.0 129700.0 25 0 9290.7 + 25209 MVAALPRS 8 114 422.7389235272461 843.4632941212923 2 422.7390014529228 MULTI CID FTMS 0 0 0 6005 60016.23046875 0.0749016216807762 2 -0.0861263275146484 2 Unmodified _MVAALPRS_ ENSG00000283787|ENST00000640310|PRR33 10.823927491677226 0.7510103885582552 2 MVA 3 5 50.445 0.0 0.0 5.9807 0.0 0.0 0.0 539.2970675104124 539.2970675104124 37.469413858957466 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + MVA 5.9807 + + 97 + 1 1.839 55157.4 1.0 2635 3370 6005 DOHH2_400M_050219_2,6007 DOHH2_400M_050219_2,6007,MVAALPRS False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6008 31.958 59.0 727610.0 25 0 63895.0 + 4281 DAQVQELSY 9 75 526.7479717117495 1051.481390490299 2 526.7482177615166 MULTI CID FTMS 0 0 0 6005 768615.6875 0.8486180979076183 -5 0.4900150299072265 3 Unmodified _DAQVQELSY_ REV__ENSG00000099910|ENST00000328879|KLHL22;REV__nc|ENSG00000099910|Q53GT1-3|KLHL22 20.453626601364224 0.2830276176381075 2 {[SA]|[TG]}PQ{I|L}S{[CP]|[EA]}SY 10 -1 + 37.639 0.0 0.0 3.5797 3.5797 71.456 0.0 0.0 0.0 9.922941906716376 8.160612466810587 8.160612466810587 3.4948500216800937 0 0.8935078169319297 0.7695510786217261 0.6109243748081782 0.3807196863200844 {[SA]|[TG]}PQ{I|L}S{[CP]|[EA]}SY;{[SA]|[TG]}QP{I|L}S{[CP]|[EA]}SY;[PS]AQ{I|L}S{[CP]|[EA]}SY;{[SA]|[TG]}P[AG]{I|L}S{[CP]|[EA]}SY;[QA]SP{I|L}S{[CP]|[EA]}SY;{[SA]|[TG]}[AG]P{I|L}S{[CP]|[EA]}SY;{[WT]|[RM]}[RN]QANY;{[SA]|[TG]}PQ{I|L}{[{M(Oxidation (M))|F}D]|MM}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[SA]|[TG]}QP{I|L}{[{M(Oxidation (M))|F}D]|MM}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[PS]A[AG]{I|L}S{[CP]|[EA]}SY 3.5797;3.2473;2.3488;2.346;2.2031;2.0136;1.9625;1.9412;1.6088;1.1151 -;-;-;-;-;-;-;-;-;- 201 1 1.839 40413.4 1.0 2636 3370 6005 DOHH2_400M_050219_2,6008 DOHH2_400M_050219_2,6008,DAQVQELSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6009 31.959 75.0 1171900.0 25 0 73108.0 + 29413 QLEDGRTLSDY 11 92 648.807076441359 1295.5995999495178 2 648.8070556521416 MULTI CID FTMS 0 0 0 6005 706778.9375 0.0494862350579394 -4 0.4472198486328125 4 Unmodified _QLEDGRTLSDY_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF 69.33821966488729 0.0343223916712224 2 Q{I|L}Y{M(Oxidation (M))|F}D[Y{I|L}][TA]Y 10 7 + 69.575 0.0 0.0 5.3701 5.3701 79.517 0.0 0.0 0.0 27.953963923997748 5.681277912325342 5.681277912325342 4.868315445438384 0 0.9476212463643424 1.6989700043360187 0.8494850021680094 0.0 Q{I|L}Y{M(Oxidation (M))|F}D[Y{I|L}][TA]Y;[AG]ANS{I|L}T[DV]N[TA]Y 5.3701;4.9943 -;- 428 + 1 1.839 72688.5 1.0 2637 3370 6005 DOHH2_400M_050219_2,6009 DOHH2_400M_050219_2,6009,QLEDGRTLSDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6010 31.961 88.0 637520.0 25 0 53393.0 + 38467 TSDKPLMY 8 84 477.7337661578353 0 477.7338744997978 PEAK CID FTMS 0 0 0 6005 661513.8125 0.9859696026999948 -1 0.1556930541992187 5 Unmodified _TSDKPLMY_ ENSG00000157741|ENST00000473989|UBN2 30.63653989081413 0.224386698648925 2 MTD 3 7 16.95 0.0 0.0 1.7778 0.0 0.0 181.0740864154768 422.2391451471313 603.313231562608 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 MTD 1.7778 - 73 + 1 1.839 50699.6 1.0 2638 3370 6005 DOHH2_400M_050219_2,6010 DOHH2_400M_050219_2,6010,TSDKPLMY False True TSDKPLMY 31.961378 477.733874499798 4107465.75 6005.0 ENSG00000157741|ENST00000473989|UBN2 4.8499635855356855 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6011 31.963 66.0 1371700.0 25 0 124270.0 + 28216 PQMLLKLRK 9 105 376.2421410206301 1125.7045936620902 3 376.2419921755791 MULTI CID FTMS 0 0 0 6005 661699.6875 0.9421654384272364 -1 0.1556930541992187 6 Unmodified _PQMLLKLRK_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 4.3292370932331545 0.7635526921153418 2 MPQK{I|L}K 6 -1 33.911 0.0 0.0 3.0124 0.0 0.0 0.0 397.2571810358032 397.2571810358032 13.01997245552581 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MPQK{I|L}K 3.0124 - 155 + 1 1.839 79690.1 1.0 2639 3370 6005 DOHH2_400M_050219_2,6011 DOHH2_400M_050219_2,6011,PQMLLKLRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6012 31.965 81.0 716310.0 25 0 66194.0 -1 FTNFLYDMLFY 11 58 745.3392330435946 1488.6639131539891 2 745.3389770388603 MULTI CID FTMS 0 0 0 6005 555875.625 0.5105082266121314 -4 0.4472198486328125 7 Oxidation (M) _FTNFLYDM(Oxidation (M))LFY_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 5.731851221503515 0.8481046878870278 2 EAQQNA{M(Oxidation (M))|F}Y 8 -1 56.319 0.0 0.0 3.7832 0.0 0.0 519.2436390607437 0.0 519.2436390607437 0.0 40.83404095816413 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.8494850021680094 EAQQNA{M(Oxidation (M))|F}Y 3.7832 - 220 1 1.839 46575.6 1.0 2640 3370 6005 DOHH2_400M_050219_2,6012 DOHH2_400M_050219_2,6012,FTNFLYDMLFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6013 31.967 130.0 543790.0 25 0 152020.0 -1 WNERCMCLEEK 11 83 524.220337519391 1569.6391831583728 3 524.2206298708916 MULTI CID FTMS 0 0 0 6005 385697.28125 0.7490972156892497 -1 0.1556930541992187 8 2 Carbamidomethyl (C),Oxidation (M) _WNERC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))LEEK_ ENST00000373741.8_1_1:31532324-31538588:-|nuORF 0.4545168274142398 0.8730034954726786 2 PHA[MT]STV{M(Oxidation (M))|F}DK 11 -1 54.714 0.0 0.0 3.4858 0.0 0.0 337.054490818134 0.0 337.054490818134 0.0 43.1203279049333 0.0 0.0 0 0.0 0.0 0.25 0.5283773187068795 PHA[MT]STV{M(Oxidation (M))|F}DK 3.4858 - 227 + 1 1.839 59147.4 1.0 2641 3370 6005 DOHH2_400M_050219_2,6013 DOHH2_400M_050219_2,6013,WNERCMCLEEK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6014 31.972 258.0 434570.0 25 0 41782.0 13452 HLREWYIS 8 93 552.2869484479331 1102.5593439626662 2 552.2867919802666 MULTI CID FTMS 0 0 0 6005 275412.84375 0.7804002127298973 -1 0.1556930541992187 9 Unmodified _HLREWYIS_ ENSG00000163827|ENST00000395905|LRRC2 39.957323273325 0.2350051964751539 2 H{I|L}MVH 5 6 65.578 0.0 0.0 5.9478 0.0 0.0 0.0 482.22165857486567 482.22165857486567 51.59863006256506 0.0 0.0 0.0 0 1.2134679910804405 1.6989700043360187 0.0 0.0 H{I|L}MVH 5.9478 - 268 + 1 1.839 87399.7 1.0 2642 3370 6005 DOHH2_400M_050219_2,6014 DOHH2_400M_050219_2,6014,HLREWYIS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6015 31.977 260.0 451290.0 25 0 105550.0 + 38414 TRGPVVRL 8 106 449.2854423107215 896.556331688243 2 449.2851745486259 MULTI CID FTMS 0 0 0 6005 228187.734375 0.7408177048553641 -1 0.1556930541992187 10 Unmodified _TRGPVVRL_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 17.11289562659939 0.6581031263288403 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RP]VR{I|L} 7 2 + 28.659 0.0 0.0 3.1965 3.1965 78.227 0.0 0.0 0.0 7.085069448096775 15.163861095344116 7.085069448096775 9.33053210369387 0 0.7215141619232908 0.0 0.0 0.5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RP]VR{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RP]V[VG]{I|L};[TP]RRV[VG]{I|L} 3.1965;2.1558;0.90109 -;-;- 94 1 1.839 95315.3 1.0 2643 3370 6005 DOHH2_400M_050219_2,6015 DOHH2_400M_050219_2,6015,TRGPVVRL False True TRGPVVRL 31.977082 449.285174548626 1491532.5 6005.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 3.0664332707722983 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6017 31.982 22.0 2109000.0 25 0 328520.0 + 16113 ITSSAVTTALK 11 62 546.3189581915045 1090.623363449809 2 546.3190795779228 MULTI CID FTMS 0 0 0 6016 2377697.5 0.1937308841591246 2 -0.1468715667724609 1 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 30.43146612281011 0.3776625119172622 2 {I|L}TSSAVTTA[K{I|L}] 11 0 + 84.98 0.0 0.0 7.7919 7.7919 96.048 0.0 0.0 0.0 68.6720445330441 3.8727356305740974 3.8727356305740974 22.31608586905513 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}TSSAVTTA[K{I|L}];{I|L}TS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TTA[K{I|L}] 7.7919;5.7457 +;- + 96 + 1 1.839 42497.1 1.0 2644 3371 6016 DOHH2_400M_050219_2,6017 DOHH2_400M_050219_2,6017,ITSSAVTTALK False True ITSSAVTTALK 31.981653 546.319079577923 192564540.0 6016.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 11.46551259358724 2.0 True 11.0 False splicing PXD020620_cell_line DOHH2_400M_050219_2 6018 31.985 154.0 531270.0 25 0 56448.0 + 20233 LLDEHHISY 9 102 563.7800952473524 1125.5456375615047 2 563.7802612185478 MULTI CID FTMS 0 0 0 6016 431698.90625 0.1664874930630035 2 -0.1468715667724609 2 Unmodified _LLDEHHISY_ ENSG00000100014|ENST00000314328|SPECC1L;nc|ENSG00000100014|Q69YQ0-2|SPECC1L 59.36838082759317 0.0264317782606298 2 {I|L}{I|L}DEHH{I|L}SY 9 0 + 71.882 0.0 0.0 6.3864 6.3864 89.654 0.0 0.0 0.0 23.3152207357208 14.973024840566469 14.973024840566469 9.552345789921034 0 1.805945812348389 2.0 0.0 0.0 + + {I|L}{I|L}DEHH{I|L}SY;{I|L}{I|L}[HM]{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;HHED{I|L}{I|L}S{I|L}Y;{I|L}{I|L}DE[RN]{[CT]|[{M(Oxidation (M))|F}G]}Y;HHED{I|L}{I|L}{I|L}SY;HHED{I|L}S{I|L}{I|L}Y;{I|L}HM{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY;HHES{I|L}D{I|L}{I|L}Y;HHES{I|L}{I|L}D{I|L}Y;[HM]{I|L}{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}SY 6.3864;5.5377;4.2278;4.1574;4.1371;4.0928;3.6447;3.4718;3.3393;2.8723 +;-;-;-;-;-;-;-;-;- + 560 + 1 1.839 65106.2 1.0 2645 3371 6016 DOHH2_400M_050219_2,6018 DOHH2_400M_050219_2,6018,LLDEHHISY True True LLDEHHISY 31.984719 563.780261218548 37830058.0 6016.0 nc|ENSG00000100014|Q69YQ0-2|SPECC1L;;ENSG00000100014|ENST00000314328|SPECC1L 7.358270327250163 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6019 31.986 76.0 855390.0 25 0 131010.0 + 37572 TLINHRVL 8 84 483.2983991072401 964.5822452812802 2 483.2982360720634 MULTI CID FTMS 0 0 0 6016 793156.125 1.0 0 0.0 3 Unmodified _TLINHRVL_ chr3:112130513-112132637|43|20.65|0.44|5.56|-|ENST00000487901|GCSAM,GCSAM;chr3:112130519-112133092|43|17.12|0.46|5.23|-|ENST00000484193|GCSAM,GCSAM;chr3:112132910-112133092|42|13.81|0.3|5.52|-|ENST00000488580|GCSAM,GCSAM;ENSG00000174500|ENST00000308910|GCSAM;ENST00000495418.5_1_3:111842304-111846933:-|nuORF;nc|ENSG00000174500|Q8N6F7-2|GCSAM;nc|ENSG00000174500|Q8N6F7-3|GCSAM 64.23631603340823 0.116217441302575 2 T{I|L}{I|L}NHR[{I|L}V] 8 0 + 78.493 0.0 0.0 8.1375 8.1375 93.407 0.0 0.0 0.0 71.01850649356642 1.989700043360188 1.989700043360188 9.262137858390815 0 1.2302046884880935 2.0 0.0 0.805462187404089 + + T{I|L}{I|L}NHR[{I|L}V];T{I|L}{I|L}GGHR[{I|L}V] 8.1375;7.1773 +;- + 215 + 1 1.839 56453.5 1.0 2646 3371 6016 DOHH2_400M_050219_2,6019 DOHH2_400M_050219_2,6019,TLINHRVL True True TLINHRVL 31.986463 483.298236072063 4222548.5 6016.0 nc|ENSG00000174500|Q8N6F7-3|GCSAM;;ENSG00000174500|ENST00000308910|GCSAM;;ENST00000495418.5_1_3:111842304-111846933:-|nuORF;;nc|ENSG00000174500|Q8N6F7-2|GCSAM;;chr3:112130513-112132637|43|20.65|0.44|5.56|-|ENST00000487901|GCSAM,GCSAM;;chr3:112132910-112133092|42|13.81|0.3|5.52|-|ENST00000488580|GCSAM,GCSAM;;chr3:112130519-112133092|43|17.12|0.46|5.23|-|ENST00000484193|GCSAM,GCSAM 4.267087618509929 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6020 31.989 120.0 811940.0 25 0 133680.0 + 6821 EEAQIIQRRL 10 78 419.24205635046025 1254.7043396515808 3 419.2416259646416 MULTI CID FTMS 0 0 0 6016 352659.46875 0.968483924128881 -1 0.0353622436523437 4 Unmodified _EEAQIIQRRL_ ENSG00000132467|ENST00000254803|UTP3 43.85829265575387 0.1168243637355526 2 EEAQ{I|L}W 6 5 62.657 0.0 0.0 4.9937 0.0 0.0 0.0 495.32663904361567 495.32663904361567 23.460696996448576 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.5 0.8807196863200843 EEAQ{I|L}W 4.9937 - 79 + 1 1.839 87055.0 1.0 2647 3371 6016 DOHH2_400M_050219_2,6020 DOHH2_400M_050219_2,6020,EEAQIIQRRL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6021 31.994 244.0 437470.0 25 0 55457.0 + 399 AEDSVMDHHF 10 121 594.2434202540395 1186.472287574879 2 594.2429687380791 MULTI CID FTMS 0 0 0 6016 292575.0 1.0 0 0.0 5 Unmodified _AEDSVMDHHF_ ENSG00000142864|ENST00000361219|SERBP1;nc|ENSG00000142864|Q8NC51-2|SERBP1;nc|ENSG00000142864|Q8NC51-4|SERBP1;nc|ENSG00000142864|Q8NC51|SERBP1 74.92900055777586 0.0187778523875693 2 {[CP]|[EA]}DSVMDHH{M(Oxidation (M))|F} 10 0 {[CP]|[EA]} + + 64.915 3.7236 1.8611 5.4713 5.4713 57.34 0.0 0.0 0.0 0.0 35.64760556500248 0.0 0.0 0 1.274227503252014 0.0 0.6747425010840047 0.0 + + {[CP]|[EA]}DSVMDHH{M(Oxidation (M))|F} 5.4713 + + 1957 + 1 1.839 82115.8 1.0 2648 3371 6016 DOHH2_400M_050219_2,6021 DOHH2_400M_050219_2,6021,AEDSVMDHHF True True AEDSVMDHHF 31.993522 594.242968738079 1716025.0 6016.0 nc|ENSG00000142864|Q8NC51-2|SERBP1;;nc|ENSG00000142864|Q8NC51|SERBP1;;nc|ENSG00000142864|Q8NC51-4|SERBP1;;ENSG00000142864|ENST00000361219|SERBP1 8.95666472117106 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6022 32.0 367.0 138880.0 25 0 17764.0 -1 LCTERCHHFY 10 66 711.8045935400446 1421.5946341468891 2 711.8010131716728 MULTI CID FTMS 0 0 0 6016 211170.734375 0.1025861208874394 8 -0.4642887115478515 6 2 Carbamidomethyl (C) _LC(Carbamidomethyl (C))TERC(Carbamidomethyl (C))HHFY_ ENST00000380416.5_1_7:6042207-6043332:-|nuORF 6.723162845929126 0.6955379296933136 2 [QA]HDEAQDQA[Y{M(Oxidation (M))|F}] 12 -1 + 61.675 0.0 0.0 4.3384 4.3384 72.759 0.0 0.0 0.0 2.060323256818215 44.68488587538946 2.060323256818215 2.711992099293248 0 0.5 0.0 0.0 0.8494850021680094 [QA]HDEAQDQA[Y{M(Oxidation (M))|F}];{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]EAQDQA[Y{M(Oxidation (M))|F}];[QA]HDEAQENA[Y{M(Oxidation (M))|F}];{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]EAQENA[Y{M(Oxidation (M))|F}];[QA]HDEA[AG]DQA[Y{M(Oxidation (M))|F}];[QA]HDEAQD[AG]A[Y{M(Oxidation (M))|F}];[HD][QA]EAQDQA[Y{M(Oxidation (M))|F}];{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]EAQD[AG]A[Y{M(Oxidation (M))|F}];{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]EA[AG]DQA[Y{M(Oxidation (M))|F}];[QA]HDEAQEGGA[Y{M(Oxidation (M))|F}] 4.3384;4.1476;4.1267;3.9359;3.6984;3.6984;3.6838;3.5076;3.5076;3.4867 -;-;-;-;-;-;-;-;-;- 574 1 1.839 43041.9 1.0 2649 3371 6016 DOHH2_400M_050219_2,6022 DOHH2_400M_050219_2,6022,LCTERCHHFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6023 32.014 800.0 367580.0 25 0 38706.0 + 35361 STDPREALQY 10 175 590.2858697027707 1178.5571864723413 2 590.2856323122978 MULTI CID FTMS 0 0 0 6016 190783.921875 0.1016179599713736 -4 0.4230022430419922 7 Unmodified _STDPREALQY_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 74.19965305603844 0.0188013450058842 2 [RP]EADTS{I|L}QY 10 6 + 53.497 0.0 0.0 4.5392 4.5392 72.151 0.0 0.0 0.0 2.7545373444029053 40.73776696170043 2.7545373444029053 1.5933415172585086 0 0.8494850021680094 0.0 0.6109243748081782 0.0 [RP]EADTS{I|L}QY;[RP]EA{I|L}DTSQY;[RP]EAD{I|L}TSQY;[RP]EADT{I|L}SQY;{[QN]|[E{I|L}]|[KN]}[NP]DTS{I|L}QY;[RP]EADTS{I|L}[AG]Y;[AG]{I|L}[DP]{I|L}[CS]{I|L}QY;{[MG]|[TS]}D[RP]EA{I|L}QY;{[QN]|[E{I|L}]|[KN]}[NP]{I|L}DTSQY;{[MG]|[TS]}D[HK]TS{I|L}QY 4.5392;4.404;3.9424;3.8752;3.8247;3.7616;3.7362;3.7328;3.6895;3.676 -;-;-;-;-;-;-;+;-;- + 2590 1 1.839 215615.9 0.8399999737739563 2650 3371 6016 DOHH2_400M_050219_2,6023 DOHH2_400M_050219_2,6023,STDPREALQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6024 32.028 800.0 237230.0 25 0 57361.0 + 6822 EEAQIIQRRL 10 122 628.3593746771485 1254.7041964210969 2 628.3585693240166 MULTI CID FTMS 0 0 0 6016 138655.375 0.9858114026682842 -1 0.0353622436523437 8 Unmodified _EEAQIIQRRL_ ENSG00000132467|ENST00000254803|UTP3 70.33199760932243 0.018925923965799 2 EE{I|L} 3 7 40.15 0.0 0.0 3.2 0.0 0.0 0.0 880.5155091163307 880.5155091163307 7.799311557667536 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 EE{I|L} 3.2 - 217 + 1 1.839 141971.7 0.75 2651 3371 6016 DOHH2_400M_050219_2,6024 DOHH2_400M_050219_2,6024,EEAQIIQRRL True True EEAQIIQRRL 32.027809 628.358569324017 2797621.375 6016.0 ENSG00000132467|ENST00000254803|UTP3 2.651163101196289 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6026 32.036 221.0 361470.0 25 0 77938.0 25153 MRAEVGLLS 9 109 488.26766604127727 0 488.2676879763603 PEAK CID FTMS 0 0 0 6025 130588.265625 0.4198807464484977 8 -0.4286613464355469 1 Unmodified _MRAEVGLLS_ ENSG00000103888|ENST00000394685|CEMIP;nc|ENSG00000103888|Q8WUJ3-2|CEMIP 15.847184025352805 0.2451986057151378 2 {M(Oxidation (M))|F} 1 8 6.9061 0.0 0.0 0.70867 0.0 0.0 340.16697163157954 484.2736961627251 824.4406677943047 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.70867 + + 15 + 1 1.84 67100.1 1.0 2652 3372 6025 DOHH2_400M_050219_2,6026 DOHH2_400M_050219_2,6026,MRAEVGLLS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6027 32.049 800.0 80585.0 25 0 2904.8 -1 LDMHRNEMKSH 11 115 707.3239081525395 1412.633263371879 2 707.3235961794853 MULTI CID FTMS 0 0 0 6025 56656.5234375 0.131941572361889 3 -0.16571044921875 2 Oxidation (M) _LDMHRNEM(Oxidation (M))KSH_ ENSG00000163755|ENST00000296051|HPS3;nc|ENSG00000163755|Q969F9-2|HPS3 7.608950283845883 0.8392484121837455 2 [VP]TVEY[MD]QN{[MS]|[{M(Oxidation (M))|F}A]} 12 -1 + 54.72 0.0 0.0 3.8736 3.8736 70.813 0.0 0.0 0.0 2.3888208891513685 7.447274948966935 2.3888208891513685 2.3888208891513685 0 0.0 1.0 1.142159058960253 0.4247425010840047 [VP]TVEY[MD]QN{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}PVEY[MD]QN{[MS]|[{M(Oxidation (M))|F}A]};[VP]TVEY[MD]QGG{[MS]|[{M(Oxidation (M))|F}A]};[VP]TVEY[MD][AG]N{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}PVEY[MD][AG]N{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}PVEY[MD]QGG{[MS]|[{M(Oxidation (M))|F}A]};{NN|[MP]|[D{I|L}]|[EV]}T{M(Oxidation (M))|F}{[QC]|[C(Carbamidomethyl (C))A]}VQQN{[MS]|[{M(Oxidation (M))|F}A]};{NN|[MP]|[D{I|L}]|[EV]}[YR]C(Carbamidomethyl (C))VQQN{[MS]|[{M(Oxidation (M))|F}A]};[TP]VVEY[MD]QN{[MS]|[{M(Oxidation (M))|F}A]};[VP][Y{M(Oxidation (M))|F}][NS]VQQN{[MS]|[{M(Oxidation (M))|F}A]} 3.8736;3.7045;3.2296;3.2296;3.0605;3.0605;2.689;2.6471;2.6325;2.578 -;-;-;-;-;-;-;-;-;- 855 1 1.84 51025.5 0.6000000238418579 2653 3372 6025 DOHH2_400M_050219_2,6027 DOHH2_400M_050219_2,6027,LDMHRNEMKSH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6028 32.052 125.0 645140.0 25 0 77139.0 + 32973 SEMAGPPQM 9 92 474.20156828314464 946.3885836330892 2 474.2017089724541 MULTI CID FTMS 0 0 0 6025 452912.375 0.5209698960180724 -2 0.0861263275146484 3 Unmodified _SEMAGPPQM_ ENSG00000174231|ENST00000304992|PRPF8 71.13359017698441 0.0206607516130725 2 {[ES]|[DT]|[{I|L}C]}MAGPPQM 9 0 {[ES]|[DT]|[{I|L}C]}MA + + 34.455 8.6721 2.0739 3.6407 3.6407 50.573 0.0 0.0 0.0 0.0 13.707063688486365 0.0 0.0 0 0.75 0.0 0.0 0.6989700043360187 + + {[ES]|[DT]|[{I|L}C]}MAGPPQM 3.6407 + + 207 + 1 1.84 67705.1 1.0 2654 3372 6025 DOHH2_400M_050219_2,6028 DOHH2_400M_050219_2,6028,SEMAGPPQM True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6029 32.054 90.0 696540.0 25 0 39595.0 + 33168 SEYDRGVNTF 10 104 594.2701355861396 1186.5257182390792 2 594.2701904177666 MULTI CID FTMS 0 0 0 6025 385553.96875 0.1859586142041762 -3 0.2418193817138672 4 Unmodified _SEYDRGVNTF_ ENSG00000143106|ENST00000271308|PSMA5;ENST00000484563.1_1_1:109955653-109968973:-|nuORF 63.22749603027936 0.0281198777558511 2 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[ET]|[MV]}GGVNT{M(Oxidation (M))|F} 11 4 + 41.903 0.0 0.0 3.5316 3.5316 67.425 0.0 0.0 0.0 1.307748267658262 1.307748267658262 1.307748267658262 0.5551732784983088 0 1.5 0.0 0.3494850021680094 0.0 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[ET]|[MV]}GGVNT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[ET]|[MV]}GRNT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}V[VS]MDHH{M(Oxidation (M))|F};{[QS]|[NT]}{M(Oxidation (M))|F}{[QC]|[C(Carbamidomethyl (C))A]}GRNT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[ET]|[MV]}NVNT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}V[VS]M[C(Carbamidomethyl (C))Q]T{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[ET]|[MV]}GGNVT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[ET]|[MV]}NNVT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}Y[DV][YK]H{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}Y[RP][C(Carbamidomethyl (C))Q]T{M(Oxidation (M))|F} 3.5316;3.4848;3.4214;3.3988;3.3795;3.3649;3.1962;3.0441;3.0251;2.9605 -;-;-;-;-;-;-;-;-;- 2827 1 1.84 49306.6 1.0 2655 3372 6025 DOHH2_400M_050219_2,6029 DOHH2_400M_050219_2,6029,SEYDRGVNTF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6030 32.057 161.0 629090.0 25 0 66852.0 + 27468 PKFEVIEKPQA 11 99 429.2430850499321 1284.7074257499964 3 429.2434570193291 MULTI CID FTMS 0 0 0 6025 228060.59375 0.3815221995184353 -3 0.2418193817138672 5 Unmodified _PKFEVIEKPQA_ ENSG00000154723|ENST00000284971|ATP5PF;nc|ENSG00000154723|P18859-2|ATP5PF 16.838377633395154 0.6848892027246138 2 [{M(Oxidation (M))|F}E]VKP{I|L}EK[QP]A 11 4 [{M(Oxidation (M))|F}E]VKP + + 16.239 5.1503 0.85792 1.264 1.264 46.977 0.0 0.0 0.0 0.0 9.249190769377629 0.0 0.0 0 0.3807196863200844 0.0 0.3252574989159953 0.6861818737241735 [{M(Oxidation (M))|F}E]VKP{I|L}EK[QP]A 1.264 - 142 + 1 1.84 86102.1 1.0 2656 3372 6025 DOHH2_400M_050219_2,6030 DOHH2_400M_050219_2,6030,PKFEVIEKPQA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6031 32.06 134.0 528680.0 25 0 34347.0 + -1 QEAASLLGKKY 11 95 403.2307854727176 402.2235090061176 1 403.2282592654228 MULTI CID FTMS 0 0 0 6025 240403.046875 0.8599823730888669 -1 0.0507640838623046 6 nc|ENSG00000132780|P49321-2|NASP;ENSG00000132780|ENST00000350030|NASP;ENST00000534101.1_1_1:46049764-46072228:+|nuORF;ENST00000464190.6_1_1:46049764-46072280:+|nuORF;nc|ENSG00000132780|P49321-3|NASP 2 [RD]{I|L} 3 -1 + 17.447 0.0 0.0 4.3377 4.3377 73.575 0.0 0.0 0.0 3.5957561683650177 4.683065105678036 3.5957561683650177 3.156201884102396 0 0.0 0.0 0.0 0.0 [RD]{I|L};{I|L}[RD];[KG][QA] 4.3377;3.553;1.8515 -;-;- 30 1 1.84 60957.5 1.0 2657 3372 6025 DOHH2_400M_050219_2,6031 DOHH2_400M_050219_2,6031, False False QEAASLLGKKY 32.059954 403.228259265423 1419398.25 6025.0 nc|ENSG00000132780|P49321-2|NASP;;ENSG00000132780|ENST00000350030|NASP;;ENST00000534101.1_1_1:46049764-46072228:+|nuORF;;ENST00000464190.6_1_1:46049764-46072280:+|nuORF;;nc|ENSG00000132780|P49321-3|NASP 6.942595958709717 3.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6032 32.064 210.0 416620.0 25 0 52308.0 + 25850 NLDSQRLQY 9 95 568.7890236410054 1135.5634943488108 2 568.7895385622978 MULTI CID FTMS 0 0 0 6025 126726.25 0.1324068687899793 -2 0.0861263275146484 7 Unmodified _NLDSQRLQY_ ENSG00000151116|ENST00000396197|UEVLD;nc|ENSG00000151116|Q8IX04-2|UEVLD;nc|ENSG00000151116|Q8IX04-3|UEVLD;nc|ENSG00000151116|Q8IX04-4|UEVLD;nc|ENSG00000151116|Q8IX04-6|UEVLD;nc|ENSG00000151116|Q8IX04-7|UEVLD 49.55428908609986 0.0413471690215031 2 {[QV]|[N{I|L}]|[RA]|[KV]}DGS{I|L}QVQY 10 4 + 64.844 0.0 0.0 5.7103 5.7103 76.303 0.0 0.0 0.0 12.096463608100336 35.124795099838124 12.096463608100336 1.1805408249163918 0 1.242992819099939 2.0 0.0 0.75 {[QV]|[N{I|L}]|[RA]|[KV]}DGS{I|L}QVQY;{[QV]|[N{I|L}]|[RA]|[KV]}DGS{I|L}QY{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}DGS{I|L}N{I|L}QY;{[QV]|[N{I|L}]|[RA]|[KV]}DGS{I|L}[AG]VQY;{[QV]|[N{I|L}]|[RA]|[KV]}DGS{I|L}[AG]Y{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}DGS{I|L}GG{I|L}QY;{[QV]|[N{I|L}]|[RA]|[KV]}DG[WK]{I|L}QY;{NN|[MP]|[D{I|L}]|[EV]}NGS{I|L}QVQY;{[QV]|[N{I|L}]|[RA]|[KV]}DG[PA][WH]{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}NGS{I|L}QY{[QV]|[N{I|L}]|[RA]|[KV]} 5.7103;5.6063;5.2901;4.9032;4.7993;4.4831;3.964;3.7738;3.6996;3.6699 -;-;-;-;-;-;-;-;-;- 401 1 1.84 69284.1 1.0 2658 3372 6025 DOHH2_400M_050219_2,6032 DOHH2_400M_050219_2,6032,NLDSQRLQY True True NLDSQRLQY 32.063956 568.789538562298 8302008.0 6025.0 nc|ENSG00000151116|Q8IX04-6|UEVLD;;nc|ENSG00000151116|Q8IX04-7|UEVLD;;ENSG00000151116|ENST00000396197|UEVLD;;nc|ENSG00000151116|Q8IX04-3|UEVLD;;nc|ENSG00000151116|Q8IX04-4|UEVLD;;nc|ENSG00000151116|Q8IX04-2|UEVLD 6.606690565745036 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6033 32.073 520.0 178180.0 25 0 12963.0 + 10425 FTDGITRTY 9 129 537.2664000180621 1072.518247102924 2 537.2675048708916 MULTI CID FTMS 0 0 0 6025 114079.5390625 0.640014581386913 2 -0.1191215515136718 8 Unmodified _FTDGITRTY_ ENST00000294309.7_2_11:68821527-68822650:+|nuORF 41.95555342248728 0.0647214845423414 2 {M(Oxidation (M))|F}TDG{I|L}YK{[ET]|[MV]} 9 3 + 54.817 0.0 0.0 5.1111 5.1111 81.263 0.0 0.0 0.0 0.0 0.0 0.0 7.3262758551373395 0 0.0 0.0 1.0994850021680094 0.0 {M(Oxidation (M))|F}TDG{I|L}YK{[ET]|[MV]};{[TV]|[{I|L}S]}[HT]T{I|L}GDTE;{[MG]|[TS]}[H{I|L}]T{I|L}GDTE;{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}YK{[ET]|[MV]};[{M(Oxidation (M))|F}T]KY{[RE]|[WV]}TE;{M(Oxidation (M))|F}TDG{I|L}[EP][TP]P;{[TV]|[{I|L}S]}[HT]T{[RE]|[WV]}TE;{[MG]|[TS]}[H{I|L}]T{[RE]|[WV]}TE;{[TV]|[{I|L}S]}[HT]T{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}E;[{M(Oxidation (M))|F}T]K{[MG]|[TS]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TE 5.1111;4.428;3.9071;3.1798;3.0395;2.9747;2.3513;1.8304;1.6705;1.5668 -;-;-;-;-;-;-;-;-;- 238 + 1 1.84 71584.9 1.0 2659 3372 6025 DOHH2_400M_050219_2,6033 DOHH2_400M_050219_2,6033,FTDGITRTY True True FTDGITRTY 32.073115 537.267504870892 2133481.5 6025.0 ENST00000294309.7_2_11:68821527-68822650:+|nuORF 5.404320081075032 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6034 32.087 800.0 113160.0 25 0 8602.5 + -1 AEAQPPSHPPSF 12 101 632.8023160291121 1263.5900791250242 2 632.8025390505791 MULTI CID FTMS 0 0 0 6025 89562.015625 1.0 0 0.0 9 Carbamidomethyl (C) _VGDQPC(Carbamidomethyl (C))HLLPE_ nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18;ENSG00000104880|ENST00000668164|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18 11.494710602746466 0.7960433852372589 2 {[CP]|[EA]}AQ 4 -1 20.679 0.0 0.0 1.6365 0.0 0.0 0.0 861.3916592854335 861.3916592854335 6.699536209249981 0.0 0.0 0.0 0 0.5 0.0 0.5501648626366046 0.0 {[CP]|[EA]}AQ 1.6365 - 194 1 1.84 71710.6 0.5799999833106995 2660 3372 6025 DOHH2_400M_050219_2,6034 DOHH2_400M_050219_2,6034,VGDQPCHLLPE False False AEAQPPSHPPSF 32.086958 632.802539050579 791130.0 6025.0 nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18;;nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18;;ENSG00000104880|ENST00000668164|ARHGEF18;;nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18;;nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18 6.053158760070801 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6035 32.095 460.0 180830.0 25 0 25179.0 8497 ETDLRNHFY 9 117 597.7811013450994 1193.547649756999 2 597.7811767458916 MULTI CID FTMS 0 0 0 6025 87123.0 1.0 0 0.0 10 Unmodified _ETDLRNHFY_ ENSG00000086589|ENST00000199814|RBM22;nc|ENSG00000086589|Q9NW64-2|RBM22 20.453626601364224 0.2830276176381075 2 [{I|L}T]N{[MS]|[{M(Oxidation (M))|F}A]}[YR]{M(Oxidation (M))|F}Y 9 6 + 40.92 0.0 0.0 3.4285 3.4285 75.426 0.0 0.0 0.0 16.382353118286233 4.237796609374058 4.237796609374058 7.76970248781722 0 0.0 2.0 0.3807196863200844 0.0 [{I|L}T]N{[MS]|[{M(Oxidation (M))|F}A]}[YR]{M(Oxidation (M))|F}Y;[{I|L}T]S{[WT]|[RM]}[YN]{M(Oxidation (M))|F}Y;[{I|L}T]NHN{M(Oxidation (M))|F}[HK][PS];[VP][RD]{M(Oxidation (M))|F}NHN[VP];[DP][RV]{M(Oxidation (M))|F}NHN[VP] 3.4285;2.7775;2.2177;0.49344;0.24122 -;-;-;-;- 183 + 1 1.84 64442.4 1.0 2661 3372 6025 DOHH2_400M_050219_2,6035 DOHH2_400M_050219_2,6035,ETDLRNHFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6036 32.109 800.0 190760.0 25 0 14743.0 18428 KWNTFYQYLQS 11 148 739.3559107177912 1476.6972685023825 2 739.3574096560478 MULTI CID FTMS 0 0 0 6025 81331.2890625 0.2464136725532547 -2 0.0861263275146484 11 Unmodified _KWNTFYQYLQS_ ENSG00000184530|ENST00000329722|C6orf58 28.49450938151212 0.4231428536161201 2 {[QV]|[N{I|L}]|[RA]|[KV]}NAS[NP]TDG{M(Oxidation (M))|F}{I|L}QS 14 9 + 90.332 0.0 0.0 6.1172 6.1172 79.265 0.0 0.0 0.0 2.320222544626546 2.320222544626546 2.320222544626546 2.320222544626546 0 2.3494850021680094 2.0 0.0 1.6237125054200234 {[QV]|[N{I|L}]|[RA]|[KV]}NAS[NP]TDG{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NADQ[{M(Oxidation (M))|F}V][QT]{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}ND{M(Oxidation (M))|F}{I|L}QDGN{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NADQ[{M(Oxidation (M))|F}V][QT]{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}ND{M(Oxidation (M))|F}[HA]DG{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}GGAS[NP]TDG{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAYY{[MG]|[TS]}G{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[QT]{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}GGD{M(Oxidation (M))|F}{I|L}QDGN{I|L}QS 6.1172;5.9601;5.9576;5.637;5.5965;5.5902;5.5043;5.4808;5.4677;5.3432 -;-;-;-;-;-;-;-;-;- 15800 1 1.84 111807.8 0.550000011920929 2662 3372 6025 DOHH2_400M_050219_2,6036 DOHH2_400M_050219_2,6036,KWNTFYQYLQS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6037 32.116 315.0 174860.0 25 0 50568.0 -1 LNCQKLLCM 9 72 541.2618916739603 0 541.2620117068291 PEAK CID FTMS 0 0 0 6025 448924.84375 0.6812341678299885 3 -0.16571044921875 12 Oxidation (M) _LNCQKLLCM(Oxidation (M))_ ENST00000341618.8_2_21:30547632-30547791:+|nuORF 7.289230182591677 0.3433663536648894 2 N 1 -1 9.6041 0.0 0.0 0.88885 0.0 0.0 881.3773314662816 82.0669420831664 963.444273549448 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 N 0.88885 + + 26 + 1 1.84 50546.3 1.0 2663 3372 6025 DOHH2_400M_050219_2,6037 DOHH2_400M_050219_2,6037,LNCQKLLCM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6038 32.124 431.0 212100.0 25 0 28444.0 + 2121 APTPRIKAEL 10 119 365.8901765736455 1094.6487003211364 3 365.8890258669853 MULTI CID FTMS 0 0 0 6025 143395.796875 1.0 0 0.0 13 Unmodified _APTPRIKAEL_ ENSG00000065717|ENST00000262953|TLE2;ENSG00000106829|ENST00000376552|TLE4;ENSG00000196781|ENST00000376499|TLE1;ENST00000462803.5_1_9:82286241-82340056:+|nuORF;nc|ENSG00000065717|Q04725-2|TLE2;nc|ENSG00000065717|Q04725-3|TLE2;nc|ENSG00000106829|Q04727-2|TLE4;nc|ENSG00000106829|Q04727-3|TLE4;nc|ENSG00000106829|Q04727-4|TLE4 18.373094154950223 0.5392593366289069 2 APT{I|L} 4 6 42.585 0.0 0.0 3.8903 0.0 0.0 0.0 709.3948458307249 709.3948458307249 27.980983180851297 0.0 0.0 0.0 0 0.1694451763165201 1.0457574905606752 0.0 0.0 APT{I|L} 3.8903 - 106 + 1 1.84 84029.5 1.0 2664 3372 6025 DOHH2_400M_050219_2,6038 DOHH2_400M_050219_2,6038,APTPRIKAEL False True APTPRIKAEL 32.123852 365.889025866985 751300.375 6025.0 ENSG00000106829|ENST00000376552|TLE4;;ENSG00000196781|ENST00000376499|TLE1;;ENSG00000065717|ENST00000262953|TLE2;;nc|ENSG00000065717|Q04725-3|TLE2;;nc|ENSG00000106829|Q04727-2|TLE4;;nc|ENSG00000065717|Q04725-2|TLE2;;ENST00000462803.5_1_9:82286241-82340056:+|nuORF;;nc|ENSG00000106829|Q04727-4|TLE4;;nc|ENSG00000106829|Q04727-3|TLE4 3.241276184717814 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6040 32.129 7.9 6436100.0 25 0 396830.0 + 28450 PTDPKVVVY 9 70 509.28421753584746 1016.5538821384948 2 509.2846862673759 MULTI CID FTMS 0 0 0 6039 6713218.0 0.6691007201594308 1 -0.0230140686035156 1 Unmodified _PTDPKVVVY_ ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;nc|ENSG00000112297|Q9Y4K1-2|CRYBG1 53.832793166522166 0.0319663582346103 2 [TP]DVKPVVY 9 2 + 68.493 0.0 0.0 6.7378 6.7378 86.523 0.0 0.0 0.0 18.64491433520909 14.973024840566469 14.973024840566469 6.709412807357751 0 1.3807196863200843 1.5228787452803376 0.9436726795685342 0.0 [TP]DVKPVVY;[TP]D[KP]VVVY;[TP]DVKVPVY;[TP][Q{I|L}]TPVVY;[KP]VDTPVVY;[TP]AAVTPVVY;[TP][QT]{I|L}PVVY;[TP]AAS{I|L}PVVY;[KP]DVTPVVY;VV[DN]{I|L}PVVY 6.7378;6.0778;6.0671;5.0633;4.9036;4.8746;4.8451;4.6563;4.5417;4.4947 -;+;-;-;-;-;-;-;-;- + 466 1 1.84 49788.0 1.0 2665 3373 6039 DOHH2_400M_050219_2,6040 DOHH2_400M_050219_2,6040,PTDPKVVVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6041 32.13 88.0 695680.0 25 0 53684.0 36253 SYERSMMSY 9 87 577.235961390303 1152.457369847406 2 577.2361328005791 MULTI CID FTMS 0 0 0 6039 146956.46875 0.0802360833957178 3 -0.1174774169921875 2 Unmodified _SYERSMMSY_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON 12.531546534597751 0.4974689918368763 2 VSY 3 7 26.242 0.0 0.0 2.2771 0.0 0.0 785.2892312749435 0.0 785.2892312749435 0.0 10.04886587278228 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 VSY 2.2771 - 119 + 1 1.84 54163.7 1.0 2666 3373 6039 DOHH2_400M_050219_2,6041 DOHH2_400M_050219_2,6041,SYERSMMSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6042 32.132 88.0 825240.0 25 0 64967.0 + 31837 RTEEGPTLSY 10 83 576.7808528406586 1151.547152748117 2 576.7808715701103 MULTI CID FTMS 0 0 0 6039 600597.3125 0.7055702974251737 -1 0.0961074829101562 3 Unmodified _RTEEGPTLSY_ ENSG00000015479|ENST00000394805|MATR3 45.739877483867886 0.1051543674217965 2 {[TV]|[{I|L}S]}WEG[TP]{I|L}SY 10 2 + 57.925 0.0 0.0 5.0302 5.0302 77.88 0.0 0.0 0.0 0.7918124604762511 49.96584697476848 0.7918124604762511 4.3933269383026285 0 1.0 0.0 1.4559771852360797 0.0 {[TV]|[{I|L}S]}WEG[TP]{I|L}SY;{[ET]|[MV]}REG[TP]{I|L}SY;EE[WK][TP]{I|L}SY;{[VA]|[{I|L}G]}{[ES]|[DT]|[{I|L}C]}EG[TP]{I|L}SY;{[TV]|[{I|L}S]}WEG{[VA]|[{I|L}G]}{I|L}DY;{[ET]|[MV]}REG{[VA]|[{I|L}G]}{I|L}DY;{[TV]|[{I|L}S]}WE{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DY;{[ET]|[MV]}REG{[VA]|[{I|L}G]}PMY;{[TV]|[{I|L}S]}WE{[QV]|[N{I|L}]|[RA]|[KV]}PMY;{[ET]|[MV]}REG[PG]{I|L}MY 5.0302;4.6486;3.8841;3.7618;3.6029;3.2214;3.08;3.0685;2.9271;2.822 -;-;-;-;-;-;-;-;-;- 367 1 1.84 58518.5 1.0 2667 3373 6039 DOHH2_400M_050219_2,6042 DOHH2_400M_050219_2,6042,RTEEGPTLSY True True RTEEGPTLSY 32.132456 576.78087157011 8078167.0 6039.0 ENSG00000015479|ENST00000394805|MATR3 7.132526238759358 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6043 32.136 158.0 730800.0 25 0 85171.0 + 13762 HSDPESDFY 9 121 548.7145668577032 1095.4145807822065 2 548.7144653201103 MULTI CID FTMS 0 0 0 6039 432769.59375 0.5093216575183183 -2 0.1468715667724609 4 Unmodified _HSDPESDFY_ ENSG00000119760|ENST00000337768|SUPT7L;nc|ENSG00000119760|O94864-2|SUPT7L 48.345845343767074 0.0439967357579942 2 [HS]DPE{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}Y 9 0 + 57.118 0.0 0.0 5.2143 5.2143 85.671 0.0 0.0 0.0 10.0 14.973024840566469 10.0 10.0 0 0.9247425010840048 0.744727494896694 1.1549471895720984 0.0 + + [HS]DPE{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}Y;{[DS]|[MA]|[CV]|TT}HPE{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YC(Carbamidomethyl (C))]{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}Y;[HS]{M(Oxidation (M))|F}{[HG]|PP}{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}Y;{[DS]|[MA]|[CV]|TT}[EP]H{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[DS]|[MA]|[CV]|TT}E{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}Y;{[DS]|[MA]|[CV]|TT}[EP]D[HS]{M(Oxidation (M))|F}Y;[WM][{M(Oxidation (M))|F}T]{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}C(Carbamidomethyl (C))C(Carbamidomethyl (C)){M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YC(Carbamidomethyl (C))][WY]Y 5.2143;4.3014;3.2392;3.155;2.7917;2.7499;2.2421;2.1586;1.8837;1.8786 +;-;-;-;-;-;-;-;-;- + 240 1 1.84 91618.2 1.0 2668 3373 6039 DOHH2_400M_050219_2,6043 DOHH2_400M_050219_2,6043,HSDPESDFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6044 32.14 207.0 349470.0 25 0 25840.0 + 357 AEAVSTRW 8 94 460.23448511754975 918.4544173018996 2 460.2347289919853 MULTI CID FTMS 0 0 0 6039 232681.34375 1.0 0 0.0 5 Unmodified _AEAVSTRW_ ENSG00000102387|ENST00000356784|TAF7L;ENSG00000178913|ENST00000313368|TAF7;nc|ENSG00000102387|Q5H9L4-3|TAF7L;nc|ENSG00000102387|Q5H9L4|TAF7L 19.256988751693697 0.6264283240490721 2 {[CP]|[EA]}AV[RN]{I|L}{M(Oxidation (M))|F} 8 4 + 37.625 0.0 0.0 4.0965 4.0965 82.792 0.0 0.0 0.0 14.436974992327125 8.416375079047498 8.416375079047498 15.603383674829026 0 1.0 0.0 0.0 0.0 {[CP]|[EA]}AV[RN]{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}A{[MG]|[TS]}[RV]W;{[CP]|[EA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RV]W;{[CP]|[EA]}[YN]VQ[VP];{[CP]|[EA]}[YN]V{[VA]|[{I|L}G]}[PG];{[YD]|[{M(Oxidation (M))|F}M]}{I|L}[KG]Q[VP];{[YD]|[{M(Oxidation (M))|F}M]}[KA]VQ[VP] 4.0965;2.3976;1.1554;1.0572;0.42924;0.20515;0.18502 -;-;-;-;-;-;- 187 + 1 1.84 64414.5 1.0 2669 3373 6039 DOHH2_400M_050219_2,6044 DOHH2_400M_050219_2,6044,AEAVSTRW False True AEAVSTRW 32.139531 460.234728991985 1287716.875 6039.0 nc|ENSG00000102387|Q5H9L4|TAF7L;;ENSG00000102387|ENST00000356784|TAF7L;;ENSG00000178913|ENST00000313368|TAF7;;nc|ENSG00000102387|Q5H9L4-3|TAF7L 2.523739139238993 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6045 32.147 412.0 343950.0 25 0 40334.0 + 27469 PKFEVIEKPQA 11 117 643.3624791661537 0 643.3619262576103 PEAK CID FTMS 0 0 0 6039 205328.421875 0.9127075432554408 -1 0.0961074829101562 6 Unmodified _PKFEVIEKPQA_ ENSG00000154723|ENST00000284971|ATP5PF;nc|ENSG00000154723|P18859-2|ATP5PF 41.09877506748344 0.1183742013972348 2 K{M(Oxidation (M))|F}EV{I|L}EKGE 9 4 66.711 0.0 0.0 5.1927 0.0 0.0 97.0537559928176 125.0724581354125 222.1262141282301 0.0 0.0 0.0 0.0 0 2.9291746928241125 0.0 0.6307196863200843 0.0 K{M(Oxidation (M))|F}EV{I|L}EKGE 5.1927 - 647 + 1 1.84 107505.2 1.0 2670 3373 6039 DOHH2_400M_050219_2,6045 DOHH2_400M_050219_2,6045,PKFEVIEKPQA True True PKFEVIEKPQA 32.146896 643.36192625761 4662803.25 6039.0 ENSG00000154723|ENST00000284971|ATP5PF;;nc|ENSG00000154723|P18859-2|ATP5PF 5.240913391113281 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6047 32.154 261.0 292780.0 25 0 31785.0 9545 FLGMHPCE 8 102 467.2012471966058 932.3879414600116 2 467.2008849978447 MULTI CID FTMS 0 0 0 6046 80867.7734375 0.6102214266521047 1 -0.0465888977050781 1 Unmodified _FLGMHPCE_ ENSG00000181789|ENST00000314797|COPG1 14.581692164780916 0.6954967302934248 2 E{I|L}E 3 6 29.45 0.0 0.0 3.1586 0.0 0.0 543.1939564435562 0.0 543.1939564435562 0.0 16.686252728754987 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 E{I|L}E 3.1586 - 99 1 1.84 65801.1 1.0 2671 3374 6046 DOHH2_400M_050219_2,6047 DOHH2_400M_050219_2,6047,FLGMHPCE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6048 32.168 800.0 215140.0 25 0 14955.0 + 40647 EEFDRYSGY 9 163 583.3084639427144 1164.6023749522287 2 583.3096191287041 MULTI CID FTMS 0 0 0 6046 136534.890625 0.5242267217116044 -3 0.1698856353759765 2 Unmodified _VLDQGKITEY_ nc|ENSG00000074603|Q6V1X1-5|DPP8;nc|ENSG00000074603|Q6V1X1|DPP8;nc|ENSG00000074603|Q6V1X1-2|DPP8;ENSG00000074603|ENST00000300141|DPP8;nc|ENSG00000074603|Q6V1X1-6|DPP8;nc|ENSG00000074603|Q6V1X1-4|DPP8 64.9267550582149 0.0236624172317635 2 V{I|L}DQGS{I|L}{I|L}TGY 11 3 + 76.481 0.0 0.0 6.5671 6.5671 85.42 0.0 0.0 0.0 44.024923214450176 12.182667820988328 12.182667820988328 6.320232147054057 0 1.4604093769761874 2.0 0.6139829889124311 0.4247425010840047 V{I|L}DQGS{I|L}{I|L}TGY;V{I|L}DQ[VS]VVSGY;V{I|L}DQ[VS][{I|L}A]TGY;V{I|L}D[AG]GS{I|L}{I|L}TGY;[{I|L}V]DVDTE{I|L}VY;V{I|L}D{[NV]|[RG]}TVVSGY;V{I|L}D{[NV]|[RG]}T[{I|L}A]TGY;[{I|L}V]DVTDE{I|L}VY;[{I|L}V]DQK{[VA]|[{I|L}G]}TEY;V{I|L}DQ[PA]{I|L}QQ[PG] 6.5671;6.0244;5.8158;5.4186;5.2211;5.1806;4.9719;4.6833;4.5479;4.3167 -;-;-;-;-;-;-;-;-;- 3142 + 1 1.84 132252.7 0.5299999713897705 2672 3374 6046 DOHH2_400M_050219_2,6048 DOHH2_400M_050219_2,6048,VLDQGKITEY True True EEFDRYSGY 32.167958 583.309619128704 656253.125 6046.0 nc|ENSG00000074603|Q6V1X1-5|DPP8;;nc|ENSG00000074603|Q6V1X1|DPP8;;nc|ENSG00000074603|Q6V1X1-2|DPP8;;ENSG00000074603|ENST00000300141|DPP8;;nc|ENSG00000074603|Q6V1X1-6|DPP8;;nc|ENSG00000074603|Q6V1X1-4|DPP8 5.307189544041951 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6049 32.172 186.0 378880.0 25 0 32904.0 + 19239 LEIEAENHY 9 105 559.2625259401275 1116.5104989470549 2 559.2621337771416 MULTI CID FTMS 0 0 0 6046 178345.1875 0.8373541758062789 -1 0.0230140686035156 3 Unmodified _LEIEAENHY_ ENSG00000173141|ENST00000309594|MRPL57 57.72198328787511 0.0273433238377839 2 {I|L}E{I|L}EAENHY 9 0 + 86.75 0.0 0.0 7.7697 7.7697 93.885 0.0 0.0 0.0 74.40791732693424 10.201812293369828 10.201812293369828 11.804560644581317 0 0.75 2.0 0.4247425010840047 0.7614393726401688 + + {I|L}E{I|L}EAENHY;{I|L}E{I|L}E[WQ]HY;{I|L}E{I|L}EAEGGHY;{I|L}EE{I|L}AENHY;{I|L}EEW[Q{I|L}]HY;{I|L}EE{I|L}[WQ]HY;{I|L}EE{I|L}AEGGHY;{I|L}EE{[DA]|[EG]}[Q{I|L}]HY;{I|L}E{I|L}EAE[DC][VP];{I|L}EE{I|L}AE[DC][VP] 7.7697;6.7124;6.263;6.131;5.3433;5.0737;4.9652;4.5137;4.1862;2.8885 +;-;-;-;-;-;-;-;-;- + 510 + 1 1.84 57450.9 1.0 2673 3374 6046 DOHH2_400M_050219_2,6049 DOHH2_400M_050219_2,6049,LEIEAENHY True True LEIEAENHY 32.171554 559.262133777142 1241709.75 6046.0 ENSG00000173141|ENST00000309594|MRPL57 7.184035142262776 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6050 32.178 372.0 360350.0 25 0 67348.0 -1 EIKSRRMEM 9 108 598.2989297492137 1194.5833065652273 2 598.2997314333916 MULTI CID FTMS 0 0 0 6046 150123.6875 0.5499069534190169 -1 0.0230140686035156 4 Oxidation (M) _EIKSRRM(Oxidation (M))EM_ ENST00000260746.5_1_10:104436534-104436687:-|nuORF 25.399314129420983 0.2080152500878129 2 {[QN]|[E{I|L}]|[KN]}MEK 5 -1 34.437 0.0 0.0 2.8828 0.0 0.0 0.0 561.2781734368357 561.2781734368357 5.363846624719812 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}MEK 2.8828 - 350 + 1 1.84 102693.4 1.0 2674 3374 6046 DOHH2_400M_050219_2,6050 DOHH2_400M_050219_2,6050,EIKSRRMEM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6051 32.181 134.0 337290.0 25 0 31701.0 + 744 AEQHVTQLM 9 90 528.7603590182147 1055.5061651032293 2 528.7603637576103 MULTI CID FTMS 0 0 0 6046 304527.46875 1.0 0 0.0 5 Unmodified _AEQHVTQLM_ ENSG00000149503|ENST00000394818|INCENP;ENST00000528037.1_1_11:61891511-61905356:+|nuORF;nc|ENSG00000149503|Q9NQS7-2|INCENP 31.26834338654808 0.1333407332142048 2 TAEQ{I|L}M 6 5 56.459 0.0 0.0 5.349 0.0 0.0 364.1869068830094 0.0 364.1869068830094 0.0 40.547444008242906 0.0 0.0 0 1.3494850021680094 0.0 1.2302046884880935 0.0 TAEQ{I|L}M 5.349 - 281 1 1.84 41009.3 1.0 2675 3374 6046 DOHH2_400M_050219_2,6051 DOHH2_400M_050219_2,6051,AEQHVTQLM False True AEQHVTQLM 32.180981 528.76036375761 1551564.0 6046.0 ENSG00000149503|ENST00000394818|INCENP;;ENST00000528037.1_1_11:61891511-61905356:+|nuORF;;nc|ENSG00000149503|Q9NQS7-2|INCENP 7.146677811940511 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6052 32.184 174.0 276340.0 25 0 14440.0 + 42184 VSDYLRQSY 9 78 565.7780674849062 1129.5415820366122 2 565.7778808474541 MULTI CID FTMS 0 0 0 6046 147176.765625 0.2220573068453237 -3 0.1698856353759765 6 Unmodified _VSDYLRQSY_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 51.41523569358685 0.0372669606867193 2 VSDY{I|L} 5 4 64.508 0.0 0.0 5.711 0.0 0.0 0.0 549.2428682916624 549.2428682916624 44.65295964254416 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + VSDY{I|L} 5.711 + + 197 + 1 1.84 44633.7 1.0 2676 3374 6046 DOHH2_400M_050219_2,6052 DOHH2_400M_050219_2,6052,VSDYLRQSY True True VSDYLRQSY 32.184385 565.777880847454 7667645.0 6046.0 nc|ENSG00000189079|Q68CP9-3|ARID2;;ENSG00000189079|ENST00000334344|ARID2 7.599478880564372 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6053 32.188 218.0 441730.0 25 0 70054.0 + -1 RRQEAIYEM 9 103 398.1982223367153 397.1909458701153 1 399.2007324099541 MULTI CID FTMS 0 0 0 6046 139264.859375 0.8869276906656244 -1 0.0230140686035156 7 ENST00000465087.1_1_10:5494419-5494892:+|nuORF;nc|ENSG00000173848|Q7Z628-2|NET1;ENSG00000173848|ENST00000355029|NET1 2 M 1 -1 13.979 0.0 0.0 3.5196 0.0 0.0 248.1394912576137 0.0 248.1394912576137 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 M 3.5196 - 25 + 1 1.84 78921.9 1.0 2677 3374 6046 DOHH2_400M_050219_2,6053 DOHH2_400M_050219_2,6053, False False RRQEAIYEM 32.188491 399.200732409954 1287792.5 6046.0 ENST00000465087.1_1_10:5494419-5494892:+|nuORF;;nc|ENSG00000173848|Q7Z628-2|NET1;;ENSG00000173848|ENST00000355029|NET1 5.163181145985921 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6054 32.193 269.0 307090.0 25 0 34580.0 + 38470 TSDLFYRP 8 117 499.7516915418101 997.4888301504202 2 499.7534973025322 MULTI CID FTMS 0 0 0 6046 103872.6796875 0.7050692087341021 -1 0.0230140686035156 8 Unmodified _TSDLFYRP_ REV__ENST00000398083.5_1_20:30450513-30457770:-|nuORF 18.13498045792455 0.6430038125133779 2 TM 2 -1 20.969 0.0 0.0 2.1022 0.0 0.0 747.3899512215124 0.0 747.3899512215124 0.0 10.691513490831408 0.0 0.0 0 0.0 0.0 0.0 0.0 TM 2.1022 - 157 + 1 1.84 66496.5 1.0 2678 3374 6046 DOHH2_400M_050219_2,6054 DOHH2_400M_050219_2,6054,TSDLFYRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6056 32.211 800.0 122930.0 25 0 8879.7 39646 VEADKELSCRQ 11 127 639.3123621147877 1276.6101712963753 2 639.3110229372978 MULTI CID FTMS 0 0 0 6055 99559.359375 0.7896446951509118 -2 0.0696029663085937 1 Unmodified _VEADKELSCRQ_ ENSG00000082258|ENST00000264157|CCNT2;ENST00000464932.1_1_2:135676424-135677557:+|nuORF;ENST00000475094.1_1_2:135676424-135700249:+|nuORF;nc|ENSG00000082258|O60583-2|CCNT2 26.020703789607367 0.4812285719068541 2 {I|L}DAD{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q 10 7 + 57.828 0.0 0.0 4.5298 4.5298 72.312 0.0 0.0 0.0 21.795606106491903 13.4119644963393 13.4119644963393 1.7609125905568137 0 1.3494850021680094 1.2218487496163564 0.0 0.75 {I|L}DAD{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}DW{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}WD{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}[RN][C(Carbamidomethyl (C))M]D{I|L}{I|L}Q;{I|L}{I|L}[MN][MN]WD{I|L}Q;{I|L}{I|L}[MN][MN]EGD{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}[RN][WE]G{M(Oxidation (M))|F}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}[RN][C(Carbamidomethyl (C))M]{I|L}D{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}[RN]{[MS]|[{M(Oxidation (M))|F}A]}WD{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}[RN]{[MS]|[{M(Oxidation (M))|F}A]}EGD{I|L}Q 4.5298;4.3918;3.2968;2.7937;2.7527;2.7203;2.6199;2.42;2.42;2.3876 -;-;-;-;-;-;-;-;-;- 576 + 1 1.839 78456.9 0.5699999928474426 2679 3375 6055 DOHH2_400M_050219_2,6056 DOHH2_400M_050219_2,6056,VEADKELSCRQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6057 32.212 50.0 1240200.0 25 0 101490.0 + 4129 DAPAHHLF 8 88 454.22478894041086 906.4350249476216 2 454.2246887087822 MULTI CID FTMS 0 0 0 6055 1049714.5 0.5741603646253566 -2 0.0696029663085937 2 Unmodified _DAPAHHLF_ ENSG00000135372|ENST00000257829|NAT10;ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000135372|Q9H0A0-2|NAT10;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8 52.69307289633392 0.1265801145616722 2 {[DA]|[EG]}PAHH{I|L}{M(Oxidation (M))|F} 8 0 + 58.726 0.0 0.0 6.4788 6.4788 93.068 0.0 0.0 0.0 42.2313110232229 11.938200260161125 11.938200260161125 23.170693164140133 0 1.1382104921644451 2.0 0.0 0.0 + + {[DA]|[EG]}PAHH{I|L}{M(Oxidation (M))|F};W{M(Oxidation (M))|F}{[SA]|[TG]}H{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}[YV][RH]{M(Oxidation (M))|F};[PA]HH{[DA]|[EG]}{I|L}{M(Oxidation (M))|F};[PA]H{[DA]|[EG]}H{I|L}{M(Oxidation (M))|F};{[SA]|[TG]}{[{M(Oxidation (M))|F}H]|[RQ]}W{I|L}{M(Oxidation (M))|F};{[SA]|[TG]}[W{M(Oxidation (M))|F}]H{I|L}{M(Oxidation (M))|F};W[KT]{[DA]|[EG]}{[WT]|[RM]};W{[RE]|[WV]}[KA]A{M(Oxidation (M))|F};HHAP{[DA]|[EG]}{I|L}{M(Oxidation (M))|F} 6.4788;3.9226;2.2827;1.5889;1.5417;1.4734;1.4263;1.0254;0.77349;0.72559 +;-;-;-;-;-;-;-;-;- + 204 + 1 1.839 54538.4 1.0 2680 3375 6055 DOHH2_400M_050219_2,6057 DOHH2_400M_050219_2,6057,DAPAHHLF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6058 32.215 147.0 572620.0 25 0 39289.0 + 15976 ITDIVNKY 8 112 483.2687712067695 964.522989480339 2 483.2686035037041 MULTI CID FTMS 0 0 0 6055 226932.53125 1.0 0 0.0 3 Unmodified _ITDIVNKY_ ENSG00000170471|ENST00000262879|RALGAPB;ENST00000490114.1_1_20:37202892-37204542:+|nuORF;nc|ENSG00000170471|Q86X10-2|RALGAPB;nc|ENSG00000170471|Q86X10-3|RALGAPB 30.22481116460888 0.4082965392918993 2 [{I|L}T]D 3 5 27.918 0.0 0.0 2.8945 0.0 0.0 0.0 632.3418425899671 632.3418425899671 -0.51911855043274 0.0 -0.51911855043274 0.0 0 0.0 2.0 0.5242275032520141 0.0 + [{I|L}T]D 2.8945 + + 297 1 1.839 67722.8 1.0 2681 3375 6055 DOHH2_400M_050219_2,6058 DOHH2_400M_050219_2,6058,ITDIVNKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6059 32.219 175.0 289800.0 25 0 39735.0 + 36848 TELPKAEKW 9 93 367.86981006901016 1100.5876008072305 3 367.8694640994072 MULTI CID FTMS 0 0 0 6055 207016.0625 0.0496075942375305 -3 0.16571044921875 4 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 17.11289562659939 0.3734572693229295 2 PK[KP]CW 6 6 15.194 0.0 0.0 1.3806 0.0 0.0 343.1738785578198 0.0 343.1738785578198 0.0 5.59008836194643 0.0 0.0 0 0.0 0.0 0.0 0.0 PK[KP]CW 1.3806 - 108 + 1 1.839 47019.4 1.0 2682 3375 6055 DOHH2_400M_050219_2,6059 DOHH2_400M_050219_2,6059,TELPKAEKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6060 32.223 234.0 229980.0 25 0 16191.0 42419 VTEKKVVIP 9 101 506.824507733618 1011.634462534036 2 506.8239013552666 MULTI CID FTMS 0 0 0 6055 203558.890625 1.0 0 0.0 5 Unmodified _VTEKKVVIP_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 20.453626601364224 0.2830276176381075 2 [{I|L}T]{I|L}[RK]AT{I|L}P 9 5 + 46.092 0.0 0.0 4.5562 4.5562 83.244 0.0 0.0 0.0 19.16386562212267 14.973024840566469 14.973024840566469 10.68372844799334 0 0.5 2.0 0.0 0.0 [{I|L}T]{I|L}[RK]AT{I|L}P;[{I|L}T]{I|L}[RK][{I|L}T]AP;[{I|L}T]{I|L}[RK]{[RE]|[WV]}P;W[{I|L}T][RK]{I|L}VP;W[{I|L}T][RK]{I|L}PV 4.5562;3.5001;2.9551;2.6619;0.87769 -;-;-;-;- 142 1 1.839 47007.8 1.0 2683 3375 6055 DOHH2_400M_050219_2,6060 DOHH2_400M_050219_2,6060,VTEKKVVIP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6061 32.232 494.0 235740.0 25 0 27972.0 + + -1 TLKPGTMSV 9 145 467.25693207322496 932.49931121325 2 467.2571594119072 MULTI CID FTMS 0 0 0 6055 145043.140625 1.0 0 0.0 6 Oxidation (M) _LTKM(Oxidation (M))QPSI_ nc|ENSG00000254087|P07948-2|LYN;ENSG00000254087|ENST00000519728|LYN 28.486842064014134 0.4448922141344407 2 [{I|L}T]KA 4 -1 27.044 0.0 0.0 2.9002 0.0 0.0 0.0 516.2262667291624 516.2262667291624 14.27973281300014 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 [{I|L}T]KA 2.9002 - 180 + 1 1.839 93567.0 1.0 2684 3375 6055 DOHH2_400M_050219_2,6061 DOHH2_400M_050219_2,6061,LTKMQPSI False False TLKPGTMSV 32.231774 467.257159411907 557597.5625 6055.0 nc|ENSG00000254087|P07948-2|LYN;;ENSG00000254087|ENST00000519728|LYN 1.9728275537490845 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6062 32.236 228.0 264600.0 25 0 36013.0 -1 MIDPSGVSY 9 82 492.72097472152257 983.4273965098452 2 492.7210265994072 MULTI CID FTMS 0 0 0 6055 102242.515625 0.4658033724525759 -2 0.0696029663085937 7 Oxidation (M) _M(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 12.531546534597751 0.4974689918368763 2 SY 2 -1 19.464 0.0 0.0 1.9792 0.0 0.0 715.321140198342 0.0 715.321140198342 0.0 12.01667520279372 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 1.9792 + + 89 + 1 1.839 51920.7 1.0 2685 3375 6055 DOHH2_400M_050219_2,6062 DOHH2_400M_050219_2,6062,MIDPSGVSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6063 32.241 287.0 188300.0 25 0 20807.0 -1 LTRCKLASL 9 99 531.3097357674358 1060.6049186016714 2 531.3094970583916 MULTI CID FTMS 0 0 0 6055 100716.9140625 1.0 0 0.0 8 Carbamidomethyl (C) _LTRC(Carbamidomethyl (C))KLASL_ ENSG00000148700|ENST00000356080|ADD3;nc|ENSG00000148700|Q9UEY8-2|ADD3 22.736283301280096 0.2418982879461534 2 AP 2 -1 29.922 0.0 0.0 2.8212 0.0 0.0 0.0 889.4917086236936 889.4917086236936 16.40250526248086 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 AP 2.8212 - 189 + 1 1.839 48339.4 1.0 2686 3375 6055 DOHH2_400M_050219_2,6063 DOHH2_400M_050219_2,6063,LTRCKLASL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6065 32.246 9.3 5170800.0 25 0 436080.0 + 29414 QLEDGRTLSDY 11 62 648.807076441359 1295.5995999495178 2 648.8076660037041 MULTI CID FTMS 0 0 0 6064 4872587.5 0.3411618507171167 2 -0.1541709899902343 1 Unmodified _QLEDGRTLSDY_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF 23.78978130925829 0.5336113198261219 2 [Q{I|L}]ED 4 7 37.167 0.0 0.0 2.8687 0.0 0.0 0.0 807.3630052063083 807.3630052063083 4.503187623076954 0.0 0.0 0.0 0 0.2742275032520141 1.3979400086720375 0.4247425010840047 0.0 + [Q{I|L}]ED 2.8687 + + 66 + 1 1.839 40985.8 1.0 2687 3376 6064 DOHH2_400M_050219_2,6065 DOHH2_400M_050219_2,6065,QLEDGRTLSDY False True QLEDGRTLSDY 32.246001 648.807666003704 285834688.0 6064.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC 8.903208096822103 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6066 32.248 83.0 603690.0 25 0 47760.0 7789 ELHLCYQF 8 97 526.7479717117495 1051.481390490299 2 526.7486450076103 MULTI CID FTMS 0 0 0 6064 534390.0625 0.590012779799636 1 -0.0695838928222656 2 Unmodified _ELHLCYQF_ ENSG00000172817|ENST00000310193|CYP7B1 13.50788311687929 0.7113601687236069 2 {[SA]|[TG]}QP{I|L}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R 9 7 + 35.131 0.0 0.0 3.3411 3.3411 67.964 0.0 0.0 0.0 9.99276551907522 11.94322809111911 9.99276551907522 1.3601701108756927 0 0.4247425010840047 0.7695510786217261 0.2887254899964357 0.0 {[SA]|[TG]}QP{I|L}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R;{[SA]|[TG]}PQ{I|L}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R;{[SA]|[TG]}Q{I|L}PS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R;{[SA]|[TG]}[AG]P{I|L}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R;[QA]SP{I|L}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R;{[SA]|[TG]}P[AG]{I|L}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R;[PS]AQ{I|L}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R;{[SA]|[TG]}QP{I|L}{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}Q;{[SA]|[TG]}[AG]{I|L}PS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R;{[SA]|[TG]}PQ{I|L}{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}Q 3.3411;3.2117;2.6763;2.4653;2.3833;2.336;2.1338;1.8707;1.8006;1.7413 -;-;-;-;-;-;-;-;-;- 325 1 1.839 45545.6 1.0 2688 3376 6064 DOHH2_400M_050219_2,6066 DOHH2_400M_050219_2,6066,ELHLCYQF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6067 32.25 85.0 529200.0 25 0 70307.0 + 16114 ITSSAVTTALK 11 65 546.3189581915045 1090.623363449809 2 546.3192626833916 MULTI CID FTMS 0 0 0 6064 568171.625 0.0462936901205374 7 -0.4481658935546875 3 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 35.079672537005266 0.2881911524121513 2 {I|L}TSSAVTTA{I|L}K 11 0 + 90.228 0.0 0.0 8.2731 8.2731 98.584 0.0 0.0 0.0 77.46380856622912 11.646617972748984 11.646617972748984 90.22801840951804 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}TSSAVTTA{I|L}K 8.2731 + + 98 + 1 1.839 40389.7 1.0 2689 3376 6064 DOHH2_400M_050219_2,6067 DOHH2_400M_050219_2,6067,ITSSAVTTALK False True False False splicing PXD020620_cell_line DOHH2_400M_050219_2 6068 32.252 97.0 542360.0 25 0 38257.0 + 26441 NTDSPLRY 8 89 483.2382029454337 964.4618529576676 2 483.2380554080009 MULTI CID FTMS 0 0 0 6064 439420.5625 1.0 0 0.0 4 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 37.97399986684836 0.2681860861828418 2 {[QS]|[NT]}DSP{I|L}RY 8 0 + 48.141 0.0 0.0 4.9915 4.9915 86.701 0.0 0.0 0.0 23.70419729680272 9.641237821364967 9.641237821364967 17.22093803183156 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + {[QS]|[NT]}DSP{I|L}RY;{[QS]|[NT]}DSP[HV][VP];{[QS]|[NT]}{[{M(Oxidation (M))|F}H]|[RQ]}[RH][PG] 4.9915;3.206;0.33812 +;-;- + 119 + 1 1.839 45302.0 1.0 2690 3376 6064 DOHH2_400M_050219_2,6068 DOHH2_400M_050219_2,6068,NTDSPLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6069 32.255 161.0 330500.0 25 0 23029.0 -1 PWEVMPELYFY 11 64 745.3392330435946 1488.6639131539891 2 745.8406249880791 MULTI CID FTMS 0 0 0 6064 294231.21875 0.30283514372722 3 -0.1999397277832031 5 Oxidation (M) _PWEVM(Oxidation (M))PELYFY_ ENST00000494591.1_1_4:144346636-144346936:+|nuORF 3.2813086475875832 0.8596665074481906 2 SEAQQNA{M(Oxidation (M))|F}Y 9 -1 60.851 0.0 0.0 4.0877 0.0 0.0 432.2050953595719 0.0 432.2050953595719 0.0 46.247293946369794 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.4247425010840047 SEAQQNA{M(Oxidation (M))|F}Y 4.0877 - 159 1 1.839 44824.2 1.0 2691 3376 6064 DOHH2_400M_050219_2,6069 DOHH2_400M_050219_2,6069,PWEVMPELYFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6070 32.259 185.0 690560.0 25 0 98069.0 7852 ELLGPPAP 8 105 397.2262180050994 792.4378830769989 2 397.2256042361259 MULTI CID FTMS 0 0 0 6064 223631.5 0.2594307364718561 -1 0.0478744506835937 6 Unmodified _ELLGPPAP_ ENSG00000130675|ENST00000252971|MNX1;nc|ENSG00000130675|P50219-2|MNX1 22.4526382665184 0.5719518724627818 2 {[QN]|[E{I|L}]|[KN]}{I|L}GKAY 7 3 + 37.105 0.0 0.0 4.6824 4.6824 78.588 0.0 0.0 0.0 21.702677986958868 9.084938383626527 9.084938383626527 6.497519816658375 0 0.3494850021680094 1.5228787452803376 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}GKAY;{[QN]|[E{I|L}]|[KN]}{I|L}[KQ]Y 4.6824;3.8625 -;- 119 + 1 1.839 109215.3 1.0 2692 3376 6064 DOHH2_400M_050219_2,6070 DOHH2_400M_050219_2,6070,ELLGPPAP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6071 32.263 219.0 527800.0 25 0 68477.0 + 36851 TELPKAEKW 9 118 551.3007693186588 1100.5869857041175 2 551.3007079958916 MULTI CID FTMS 0 0 0 6064 218012.21875 0.0838865858245387 -3 0.1174774169921875 7 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 69.33821966488729 0.021354776001734 2 {[ET]|[MV]}{I|L}PKAEKW 9 0 + 59.504 0.0 0.0 5.4065 5.4065 88.655 0.0 0.0 0.0 7.147642715192504 9.208187539523747 7.147642715192504 19.99417243257865 0 2.110924374808178 0.0 0.3494850021680094 0.3807196863200844 + + {[ET]|[MV]}{I|L}PKAEKW;W[{M(Oxidation (M))|F}T]{I|L}{I|L}P{I|L}[DP];{[ET]|[MV]}{I|L}P{I|L}{[QS]|[NT]}KW;[KP]AE{I|L}TEKW;[KP]A{I|L}ETEKW;{[CP]|[EA]}KP{I|L}TEKW;[{I|L}T]NP{I|L}TEKW;{[QV]|[N{I|L}]|[RA]|[KV]}TP{I|L}TEKW;[KP]AEK{I|L}{[ET]|[MV]}W;[KP]AT{[QN]|[E{I|L}]|[KN]}EKW 5.4065;3.5899;3.4519;3.3726;3.2126;2.722;2.722;2.5723;2.3255;2.144 +;-;-;-;-;-;-;-;-;- + 1363 + 1 1.839 92644.2 1.0 2693 3376 6064 DOHH2_400M_050219_2,6071 DOHH2_400M_050219_2,6071,TELPKAEKW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6072 32.27 396.0 514600.0 25 0 60473.0 + 25883 NLIKKTVL 8 127 464.81329606400095 927.612039194802 2 464.8133727908134 MULTI CID FTMS 0 0 0 6064 214218.03125 0.0737670794767351 -2 0.0944633483886718 8 Unmodified _NLIKKTVL_ ENSG00000163811|ENST00000407426|WDR43;ENST00000466067.1_1_2:29147965-29158512:+|nuORF 85.64151623876279 0.067157859451692 2 {I|L}N{I|L}KKTV{I|L} 8 2 + 78.16 0.0 0.0 8.4259 8.4259 81.163 0.0 0.0 0.0 47.153952429111285 14.904630595263413 14.904630595263413 0.0443219174010778 0 1.7544321917401078 2.0 1.2302046884880935 0.0 {I|L}N{I|L}KKTV{I|L};N{I|L}{I|L}KKTV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KKTV{I|L};{I|L}GG{I|L}KKTV{I|L};KKT{I|L}V{I|L}N{I|L};[K{I|L}]KTV{I|L}N{I|L};KK{I|L}TV{I|L}N{I|L};{I|L}{I|L}NKKTV{I|L};[KT]K{I|L}V{I|L}N{I|L};KKT{I|L}VQV{I|L} 8.4259;8.4211;6.2544;5.2713;4.0179;3.9381;3.9381;3.5997;3.4661;3.4224 -;+;+;-;-;-;-;-;-;- + 619 + 1 1.839 157132.4 1.0 2694 3376 6064 DOHH2_400M_050219_2,6072 DOHH2_400M_050219_2,6072,NLIKKTVL True True NLIKKTVL 32.269884 464.813372790813 26293064.0 6064.0 ENSG00000163811|ENST00000407426|WDR43;;ENST00000466067.1_1_2:29147965-29158512:+|nuORF 3.472989320755005 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6073 32.276 335.0 212430.0 25 0 20761.0 -1 FIDTAGAMLQY 11 104 623.295853928066 1244.577154922932 2 623.2919189333916 MULTI CID FTMS 0 0 0 6064 209397.40625 1.0 0 0.0 9 Oxidation (M) _FIDTAGAM(Oxidation (M))LQY_ ENSG00000119723|ENST00000334571|COQ6;ENST00000556588.5_1_14:74427827-74429699:+|nuORF;nc|ENSG00000119723|Q9Y2Z9-2|COQ6;nc|ENSG00000119723|Q9Y2Z9-3|COQ6 33.4449034751529 0.3133739643825231 2 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}D{I|L}E 10 -1 + 38.584 0.0 0.0 3.1002 3.1002 65.566 0.0 0.0 0.0 7.526680666247067 13.984484532805162 7.526680666247067 0.2435003003541425 0 0.0 1.5228787452803376 0.1923877696554315 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}D{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[WM][YE]{I|L}E;{M(Oxidation (M))|F}{I|L}D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[TV]|[{I|L}S]}D{[QN]|[E{I|L}]|[KN]};{M(Oxidation (M))|F}{I|L}[YE][WM]D{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}K[QT];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[QT] 3.1002;3.0806;1.5805;1.561;1.0458;1.0458 -;-;-;-;-;- 120 1 1.839 56938.5 1.0 2695 3376 6064 DOHH2_400M_050219_2,6073 DOHH2_400M_050219_2,6073,FIDTAGAMLQY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6074 32.281 292.0 276100.0 25 0 25795.0 13885 HVPEHAVVL 9 116 500.7825017365613 999.5504505399224 2 500.7824890017509 MULTI CID FTMS 0 0 0 6064 193369.875 0.1393032653028512 15 -1.143402099609375 10 Unmodified _HVPEHAVVL_ ENSG00000169710|ENST00000306749|FASN 21.74664581756881 0.2544899275067181 2 [HV][EP]HAVV{I|L} 9 0 + 35.018 0.0 0.0 3.5033 3.5033 75.161 0.0 0.0 0.0 14.86757473850034 20.403376390097904 14.86757473850034 6.98970004336018 0 0.4436726795685343 1.6989700043360187 0.0 0.0 + + [HV][EP]HAVV{I|L};[HV][EP]AHVV{I|L};[HV][EP]AVHV{I|L} 3.5033;2.8041;2.3267 +;-;- + 182 1 1.839 63418.1 1.0 2696 3376 6064 DOHH2_400M_050219_2,6074 DOHH2_400M_050219_2,6074,HVPEHAVVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6075 32.284 141.0 459250.0 25 0 52622.0 22815 LRFAASLIS 9 96 489.2925223477481 976.570491762296 2 489.2927734255791 MULTI CID FTMS 0 0 0 6064 191847.34375 0.1344808422605852 11 -0.9080162048339844 11 Unmodified _LRFAASLIS_ ENSG00000070748|ENST00000337653|CHAT;nc|ENSG00000070748|P28329-2|CHAT;nc|ENSG00000070748|P28329-3|CHAT 11.640296217721598 0.521594087909532 2 [R{I|L}]PE{I|L}S 6 5 14.13 0.0 0.0 1.4469 0.0 0.0 0.0 278.1392849167714 278.1392849167714 0.3174312876055314 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 [R{I|L}]PE{I|L}S 1.4469 - 77 1 1.839 57750.9 1.0 2697 3376 6064 DOHH2_400M_050219_2,6075 DOHH2_400M_050219_2,6075,LRFAASLIS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6076 32.298 800.0 144340.0 25 0 7854.9 + + 8384 SEEDQAAELRAY 12 147 691.3155565765989 1380.6165602199976 2 691.3143798708916 MULTI CID FTMS 0 0 0 6064 90629.4296875 0.477110037336971 1 -0.0695838928222656 12 Unmodified _ESEDLNIYDQR_ ENST00000531186.5_1_11:32605433-32610279:+|nuORF;ENSG00000149100|ENST00000531120|EIF3M 41.95555342248728 0.1822715950200113 2 {[ES]|[DT]|[{I|L}C]}EDQAAE{I|L}RAY 12 -1 + 112.9 0.0 0.0 8.1778 8.1778 90.579 0.0 0.0 0.0 16.30784142589856 8.45098040014257 8.45098040014257 8.45098040014257 0 2.662437995416459 0.8860566476931632 0.6549471895720985 0.6747425010840047 {[ES]|[DT]|[{I|L}C]}EDQAAE{I|L}RAY;{[ES]|[DT]|[{I|L}C]}EDQAAE{I|L}RS{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}ED[AG]AAE{I|L}RAY;{[ES]|[DT]|[{I|L}C]}ED[AG]AAE{I|L}RS{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}ED[RN]E{I|L}RAY;{[ES]|[DT]|[{I|L}C]}EDQAVVDRAY;{[ES]|[DT]|[{I|L}C]}EDQ[RD]{I|L}RAY;{[ES]|[DT]|[{I|L}C]}E[WQ]AE{I|L}RAY;{[ES]|[DT]|[{I|L}C]}EDQ{[WT]|[RM]}PRAY;{[ES]|[DT]|[{I|L}C]}ED[RN]E{I|L}RS{M(Oxidation (M))|F} 8.1778;7.5657;7.5188;6.9067;6.1141;5.9863;5.9524;5.6534;5.5163;5.502 -;-;-;-;-;-;-;-;-;- 1074 + 1 1.839 87142.6 0.5899999737739563 2698 3376 6064 DOHH2_400M_050219_2,6076 DOHH2_400M_050219_2,6076,ESEDLNIYDQR False False SEEDQAAELRAY 32.297984 691.314379870892 1345265.75 6064.0 ENST00000531186.5_1_11:32605433-32610279:+|nuORF;;ENSG00000149100|ENST00000531120|EIF3M 9.416823387145996 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6077 32.302 208.0 192720.0 25 0 22359.0 + 31844 RTEPFQDGY 9 76 556.7538074468359 0 556.7533447146416 PEAK CID FTMS 0 0 0 6064 209781.859375 1.0 0 0.0 13 Unmodified _RTEPFQDGY_ ENSG00000164543|ENST00000319357|STK17A 18.373094154950223 0.2162240501727768 2 GDQ{M(Oxidation (M))|F}P 5 8 37.959 0.0 0.0 3.4151 0.0 0.0 181.07058987315745 383.1684054010376 564.238995274195 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 GDQ{M(Oxidation (M))|F}P 3.4151 - 54 + 1 1.839 36687.4 1.0 2699 3376 6064 DOHH2_400M_050219_2,6077 DOHH2_400M_050219_2,6077,RTEPFQDGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6078 32.311 430.0 185400.0 25 0 20266.0 + 603 AEKAPTNIVY 10 123 553.2988718733943 1104.5831908135883 2 553.2988769412041 MULTI CID FTMS 0 0 0 6064 185717.140625 0.4762207680210215 2 -0.1541709899902343 14 Unmodified _AEKAPTNIVY_ ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2 41.95555342248728 0.1369168616057562 2 [QT]VPKA{[CP]|[EA]}VY 10 7 + 26.348 0.0 0.0 2.3853 2.3853 64.385 0.0 0.0 0.0 0.2312639104201466 1.883797645430505 0.2312639104201466 0.2312639104201466 0 0.8182503180159344 0.0 0.4247425010840047 0.3494850021680094 [QT]VPKA{[CP]|[EA]}VY;[TA]GVPKA{[CP]|[EA]}VY;[QT]VPA{[QS]|[NT]}{I|L}VY;{[CP]|[EA]}KPKA{[CP]|[EA]}VY;[QT]VAP{[QS]|[NT]}{I|L}VY;{[CP]|[EA]}KPA{[QS]|[NT]}{I|L}VY;[TA]GVPA{[QS]|[NT]}{I|L}VY;[QT]VPAK{[CP]|[EA]}VY;[QT]VPK[RD]VY;{[CP]|[EA]}KAP{[QS]|[NT]}{I|L}VY 2.3853;2.3644;2.2148;2.1419;2.0139;1.9714;1.9324;1.8302;1.7939;1.7705 -;-;-;-;-;-;-;-;-;+ + 445 1 1.839 66857.1 1.0 2700 3376 6064 DOHH2_400M_050219_2,6078 DOHH2_400M_050219_2,6078,AEKAPTNIVY False True AEKAPTNIVY 32.310799 553.298876941204 2293242.75 6064.0 nc|ENSG00000117748|P15927-2|RPA2;;nc|ENSG00000117748|P15927-3|RPA2;;ENSG00000117748|ENST00000373912|RPA2 5.043449878692627 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6080 32.316 45.0 1316300.0 25 0 56901.0 + 35362 STDPREALQY 10 85 590.2858697027707 1178.5571864723413 2 590.2858764529228 MULTI CID FTMS 0 0 0 6079 1193521.125 0.6357096589339561 2 -0.1303558349609375 1 Unmodified _STDPREALQY_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 49.55428908609986 0.0827668555218455 2 {I|L}QY 3 7 34.693 0.0 0.0 2.9437 0.0 0.0 756.3382074439279 0.0 756.3382074439279 0.0 11.059837384595925 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + {I|L}QY 2.9437 + + 118 1 1.839 46693.3 1.0 2701 3377 6079 DOHH2_400M_050219_2,6080 DOHH2_400M_050219_2,6080,STDPREALQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6081 32.317 66.0 720530.0 25 0 49346.0 + 33169 SEYDRGVNTF 10 75 594.2701355861396 1186.5257182390792 2 594.2698852419853 MULTI CID FTMS 0 0 0 6079 647165.9375 0.3121380938907701 2 -0.1303558349609375 2 Unmodified _SEYDRGVNTF_ ENSG00000143106|ENST00000271308|PSMA5;ENST00000484563.1_1_1:109955653-109968973:-|nuORF 43.77239144664712 0.1177314611616471 2 {[ES]|[DT]|[{I|L}C]}Y[{I|L}T]H[CS]T{M(Oxidation (M))|F} 10 5 {[ES]|[DT]|[{I|L}C]} + + 36.978 3.7236 1.7233 3.1165 3.1165 49.053 0.0 0.0 0.0 0.0 21.960835563435225 0.0 0.0 0 1.424742501084005 0.0 0.9876954943324544 0.0 {[ES]|[DT]|[{I|L}C]}Y[{I|L}T]H[CS]T{M(Oxidation (M))|F} 3.1165 - 387 + 1 1.839 39791.2 1.0 2702 3377 6079 DOHH2_400M_050219_2,6081 DOHH2_400M_050219_2,6081,SEYDRGVNTF True True SEYDRGVNTF 32.317188 594.269885241985 29019054.0 6079.0 ENST00000484563.1_1_1:109955653-109968973:-|nuORF;;ENSG00000143106|ENST00000271308|PSMA5 6.956230004628499 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6082 32.32 115.0 421200.0 25 0 36105.0 + 25851 NLDSQRLQY 9 78 568.7890236410054 1135.5634943488108 2 568.7894775271416 MULTI CID FTMS 0 0 0 6079 271848.71875 0.284034583476235 3 -0.1454925537109375 3 Unmodified _NLDSQRLQY_ ENSG00000151116|ENST00000396197|UEVLD;nc|ENSG00000151116|Q8IX04-2|UEVLD;nc|ENSG00000151116|Q8IX04-3|UEVLD;nc|ENSG00000151116|Q8IX04-4|UEVLD;nc|ENSG00000151116|Q8IX04-6|UEVLD;nc|ENSG00000151116|Q8IX04-7|UEVLD 34.40172386719151 0.1061884637610825 2 {[QV]|[N{I|L}]|[RA]|[KV]}DHTN{[VA]|[{I|L}G]}PR 10 6 + 62.89 0.0 0.0 5.5382 5.5382 76.008 0.0 0.0 0.0 20.221260677816787 1.497623203333319 1.497623203333319 1.497623203333319 0 0.3494850021680094 2.0 0.4247425010840047 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}DHTN{[VA]|[{I|L}G]}PR;{[QV]|[N{I|L}]|[RA]|[KV]}DHTN{[VA]|[{I|L}G]}RP;{[QV]|[N{I|L}]|[RA]|[KV]}DHTGG{[VA]|[{I|L}G]}PR;{[QV]|[N{I|L}]|[RA]|[KV]}DHTGG{[VA]|[{I|L}G]}RP;{[QV]|[N{I|L}]|[RA]|[KV]}DSQH{[VA]|[{I|L}G]}PR;{[QV]|[N{I|L}]|[RA]|[KV]}DSQH{[VA]|[{I|L}G]}RP;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]NTS{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}DS[AG]H{[VA]|[{I|L}G]}PR;{[QV]|[N{I|L}]|[RA]|[KV]}DS[AG]H{[VA]|[{I|L}G]}RP;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]GGTS{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]} 5.5382;5.4063;4.7312;4.5993;4.4328;4.3009;3.8636;3.6258;3.4939;3.0566 -;-;-;-;-;-;-;-;-;- 347 + 1 1.839 40217.1 1.0 2703 3377 6079 DOHH2_400M_050219_2,6082 DOHH2_400M_050219_2,6082,NLDSQRLQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6083 32.324 213.0 555010.0 25 0 92326.0 + 32974 SEMAGPPQM 9 111 474.20156828314464 946.3885836330892 2 474.2018615603447 MULTI CID FTMS 0 0 0 6079 271551.96875 0.3123571108499527 3 -0.1454925537109375 4 Unmodified _SEMAGPPQM_ ENSG00000174231|ENST00000304992|PRPF8 71.13359017698441 0.0206607516130725 2 {[ES]|[DT]|[{I|L}C]}MAGPPQM 9 0 {[ES]|[DT]|[{I|L}C]}MA + + 34.189 8.9621 2.1433 3.6125 3.6125 50.443 0.0 0.0 0.0 0.0 15.147678599754002 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.6989700043360187 + + {[ES]|[DT]|[{I|L}C]}MAGPPQM 3.6125 + + 266 + 1 1.839 96145.2 1.0 2704 3377 6079 DOHH2_400M_050219_2,6083 DOHH2_400M_050219_2,6083,SEMAGPPQM True True SEMAGPPQM 32.323628 474.201861560345 9800398.0 6079.0 ENSG00000174231|ENST00000304992|PRPF8 7.278613567352295 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6084 32.331 411.0 287660.0 25 0 19524.0 30101 QVHLLTRS 8 124 477.28000412721417 952.5454553212284 2 477.2801086306572 MULTI CID FTMS 0 0 0 6079 179390.15625 1.0 0 0.0 5 Unmodified _QVHLLTRS_ ENST00000373109.6_1_10:73848134-73848311:-|nuORF 24.020572477871973 0.5389365498350341 2 {[QV]|[N{I|L}]|[RA]|[KV]}H{I|L} 4 4 43.416 0.0 0.0 4.5579 0.0 0.0 0.0 472.2537935846313 472.2537935846313 29.436974992327123 0.0 0.0 0.0 0 1.110924374808178 2.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}H{I|L} 4.5579 + + 139 + 1 1.839 92855.1 1.0 2705 3377 6079 DOHH2_400M_050219_2,6084 DOHH2_400M_050219_2,6084,QVHLLTRS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6085 32.334 175.0 337680.0 25 0 40053.0 + 14362 IEVNGKQSW 9 90 530.7749743542112 1059.5353957752222 2 530.7748901247978 MULTI CID FTMS 0 0 0 6079 171144.609375 0.2919373903361245 -2 0.1174583435058593 6 Unmodified _IEVNGKQSW_ chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;nc|ENSG00000111913|Q9Y4F9|RIPOR2 45.739877483867886 0.0497104363764649 2 {I|L}EVNG[KQ]SW 9 0 + 76.679 0.0 0.0 7.237 7.237 91.096 0.0 0.0 0.0 33.46787486224656 13.45098040014257 13.45098040014257 9.208187539523747 0 1.25 1.6989700043360187 0.5 0.3807196863200844 + + {I|L}EVNG[KQ]SW;{I|L}EVGGG[KQ]SW;{I|L}EVNG[KQ]C(Carbamidomethyl (C)){I|L};{I|L}EVNG[KQ]GC{I|L};{I|L}EVGGG[KQ]C(Carbamidomethyl (C)){I|L};{I|L}EVGGG[KQ]GC{I|L} 7.237;6.3679;5.9675;5.474;5.0984;4.609 +;-;-;-;-;- + 424 + 1 1.839 51673.1 1.0 2706 3377 6079 DOHH2_400M_050219_2,6085 DOHH2_400M_050219_2,6085,IEVNGKQSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6086 32.338 211.0 526510.0 25 0 43049.0 -1 0 147 361.1933455951985 720.372138257197 2 361.1931030154228 MULTI CID FTMS 0 0 0 6079 171972.25 1.0 0 0.0 7 2 [PA]HH{I|L}{M(Oxidation (M))|F} 6 -1 + 37.826 0.0 0.0 5.2509 5.2509 87.083 0.0 0.0 0.0 14.82734448061692 8.300507888170031 8.300507888170031 14.82734448061692 0 0.837180496500464 1.5228787452803376 0.0 0.0 [PA]HH{I|L}{M(Oxidation (M))|F};HHAP{I|L}{M(Oxidation (M))|F};[HA]PH{I|L}{M(Oxidation (M))|F};HHA{I|L}P{M(Oxidation (M))|F};[HA]HP{I|L}{M(Oxidation (M))|F};[H{I|L}][HA]P{M(Oxidation (M))|F};[YV][RH]{M(Oxidation (M))|F} 5.2509;3.1926;2.719;2.0372;1.0491;0.86141;0.27855 -;-;-;-;-;-;- 85 1 1.839 89592.0 1.0 2707 3377 6079 DOHH2_400M_050219_2,6086 DOHH2_400M_050219_2,6086, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6087 32.342 191.0 302020.0 25 0 32844.0 + -1 KGSGVVIIM 9 88 460.268636851516 918.522720769832 2 460.2678710818291 MULTI CID FTMS 0 0 0 6079 149718.890625 1.0 0 0.0 8 Oxidation (M) _PLAFLVIM(Oxidation (M))_ nc|ENSG00000133835|P51659-3|HSD17B4;nc|ENSG00000133835|P51659-2|HSD17B4;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;ENSG00000133835|ENST00000510025|HSD17B4 17.086550045450526 0.6584923310065985 2 [TA]QKV{I|L}{I|L}{M(Oxidation (M))|F} 8 -1 + 32.401 0.0 0.0 3.5275 3.5275 76.212 0.0 0.0 0.0 5.428462229040001 17.80091951352803 5.428462229040001 8.45098040014257 0 0.8935078169319297 0.0 0.1861818737241735 0.0 [TA]QKV{I|L}{I|L}{M(Oxidation (M))|F};[TA]QK{I|L}V{I|L}{M(Oxidation (M))|F};[TA][AG]KV{I|L}{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}AKK{I|L}{I|L}{M(Oxidation (M))|F};[TA][AG]K{I|L}V{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}[K{I|L}]AK{I|L}{M(Oxidation (M))|F} 3.5275;2.6074;2.5191;1.9389;1.5991;0.31811 -;-;-;-;-;- 135 1 1.839 50225.5 1.0 2708 3377 6079 DOHH2_400M_050219_2,6087 DOHH2_400M_050219_2,6087,PLAFLVIM False False KGSGVVIIM 32.342019 460.267871081829 932306.0 6079.0 nc|ENSG00000133835|P51659-3|HSD17B4;;nc|ENSG00000133835|P51659-2|HSD17B4;;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;;ENSG00000133835|ENST00000510025|HSD17B4 1.7435181140899658 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6088 32.353 629.0 368150.0 25 0 23861.0 + 6818 EEAQFETKKLY 11 160 462.5699173995613 1384.6879227988838 3 462.5696594119072 MULTI CID FTMS 0 0 0 6079 119854.1640625 0.1497468677902757 -2 0.1174583435058593 9 Unmodified _EEAQFETKKLY_ ENSG00000183291|ENST00000331835|SELENOF;ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF 47.05281240577143 0.1339515440072066 2 {M(Oxidation (M))|F}[QA]EEETKK{I|L}Y 11 4 + 57.42 0.0 0.0 4.1468 4.1468 81.828 0.0 0.0 0.0 16.648444624494466 11.06547323513812 11.06547323513812 11.13943352306837 0 0.0 0.0 1.2302046884880935 0.5 {M(Oxidation (M))|F}[QA]EEETKK{I|L}Y;{M(Oxidation (M))|F}[QA]EEETKKY{I|L};{M(Oxidation (M))|F}[QA]Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TKK{I|L}Y;{M(Oxidation (M))|F}[QA]Y[HS]TKK{I|L}Y;{M(Oxidation (M))|F}[QA]{M(Oxidation (M))|F}[HC]TKK{I|L}Y;[KT]K{I|L}E{M(Oxidation (M))|F}EY[QA]E;[KT]K{I|L}E{M(Oxidation (M))|F}YE[QA]E;[KT]K{I|L}EY{M(Oxidation (M))|F}E[QA]E;[KT]K{I|L}EYE{M(Oxidation (M))|F}[QA]E;KKT{I|L}E{M(Oxidation (M))|F}EY[QA]E 4.1468;3.3423;3.0857;3.0539;2.8683;2.5467;2.4864;2.4288;2.3036;2.2897 -;-;-;-;-;-;-;-;-;- 2057 + 1 1.839 180916.0 1.0 2709 3377 6079 DOHH2_400M_050219_2,6088 DOHH2_400M_050219_2,6088,EEAQFETKKLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6089 32.361 475.0 123510.0 25 0 7950.2 19522 LFNDPDLREVW 11 105 702.3542682620841 1402.6939835909682 2 702.3544189333916 MULTI CID FTMS 0 0 0 6079 98489.046875 0.5338406569273952 -1 0.0695838928222656 10 Unmodified _LFNDPDLREVW_ ENSG00000113360|ENST00000344624|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA 8.155526934196011 0.8366696279279818 2 {[TV]|[{I|L}S]}NSQG[VG]QC[QA]V{I|L} 14 11 + 52.387 0.0 0.0 3.7347 3.7347 50.886 0.0 0.0 0.0 9.953339189901412 16.667853209646175 9.953339189901412 0.0 0 0.7134679910804405 1.5228787452803376 0.2887254899964357 0.6747425010840047 {[TV]|[{I|L}S]}NSQG[VG]QC[QA]V{I|L};{[TV]|[{I|L}S]}NSQG[VG]DDVTV{I|L};{[TV]|[{I|L}S]}NSQG[VG]Q[NS]TV{I|L};{[TV]|[{I|L}S]}NSQG{[{M(Oxidation (M))|F}H]|[RQ]}[NS]TV{I|L};{[TV]|[{I|L}S]}NSQG{[{M(Oxidation (M))|F}H]|[RQ]}C[KA]V{I|L};{[TV]|[{I|L}S]}NSQG{[{M(Oxidation (M))|F}H]|[RQ]}C[QA]V{I|L};{[TV]|[{I|L}S]}N{[WN]|[YH]}QQ[NS]TV{I|L};{[TV]|[{I|L}S]}N{[WN]|[YH]}QQC[KA]V{I|L};{[TV]|[{I|L}S]}N{[WN]|[YH]}QDDVTV{I|L};{[TV]|[{I|L}S]}KDD[PS]QC[QA]V{I|L} 3.7347;3.7347;3.7347;3.6886;3.6886;3.6886;3.6177;3.6177;3.6177;3.5622 -;-;-;-;-;-;-;-;-;- 2850 1 1.839 45252.8 1.0 2710 3377 6079 DOHH2_400M_050219_2,6089 DOHH2_400M_050219_2,6089,LFNDPDLREVW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6090 32.367 277.0 274280.0 25 0 22975.0 -1 0 87 560.3278154794277 559.3205390128277 1 560.3274413943291 MULTI CID FTMS 0 0 0 6079 252834.0625 0.058494610452467 10 -0.8384323120117188 11 2 Y 1 -1 11.42 0.0 0.0 2.0418 0.0 0.0 378.24631828704486 0.0 378.24631828704486 0.0 1.041379712135413 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.0418 - 22 + 1 1.839 63856.3 1.0 2711 3377 6079 DOHH2_400M_050219_2,6090 DOHH2_400M_050219_2,6090, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6091 32.38 800.0 127450.0 25 0 12121.0 + + 791 ASEITSKGASLY 12 126 613.8165270278821 1225.618501122564 2 613.8166992068291 MULTI CID FTMS 0 0 0 6079 147102.5625 1.0 0 0.0 12 Unmodified _AESLPLSFSIY_ ENSG00000103351|ENST00000576634|CLUAP1 62.57269311338072 0.058704053366003 2 {[TV]|[{I|L}S]}QKSTEAS{I|L}Y 11 -1 + 76.782 0.0 0.0 6.2647 6.2647 81.002 0.0 0.0 0.0 3.125918950875501 16.575773191777927 3.125918950875501 3.125918950875501 0 0.3807196863200844 1.0969100130080565 2.4336068845642203 0.25 {[TV]|[{I|L}S]}QKSTEAS{I|L}Y;[{I|L}T]NKSTEAS{I|L}Y;{[SA]|[TG]}EKKTEAS{I|L}Y;{[SA]|[TG]}{[VA]|[{I|L}G]}KSTEAS{I|L}Y;{[SA]|[TG]}E{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AS{I|L}Y;{[SA]|[TG]}E{I|L}{I|L}V[MT]S{I|L}Y;{[TV]|[{I|L}S]}[AG]KSTEAS{I|L}Y;{[QN]|[E{I|L}]|[KN]}ST{I|L}TEAS{I|L}Y;[{I|L}T]GGKSTEAS{I|L}Y;{[SA]|[TG]}ETKKEAS{I|L}Y 6.2647;6.0097;5.9489;5.9357;5.6569;5.5273;5.316;5.2529;5.0609;5.0356 -;-;-;-;-;-;-;-;-;- 6567 1 1.839 80828.9 0.699999988079071 2712 3377 6079 DOHH2_400M_050219_2,6091 DOHH2_400M_050219_2,6091,AESLPLSFSIY False False ASEITSKGASLY 32.380352 613.816699206829 771288.5 6079.0 ENSG00000103351|ENST00000576634|CLUAP1 7.357959270477295 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6092 32.395 800.0 99669.0 25 0 27660.0 -1 0 45 1197.4886407752456 3589.444092925937 3 1198.158984363079 MULTI CID FTMS 0 0 0 6079 88385.5703125 0.5698725113119665 -3 0.1640472412109375 13 2 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.30559 0.0 0.0 2000.6937403198324 1381.647264985017 3382.341005304849 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.30559 - 7 + 1 1.839 73464.8 0.4000000059604645 2713 3377 6079 DOHH2_400M_050219_2,6092 DOHH2_400M_050219_2,6092, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6094 32.402 169.0 354240.0 25 0 42428.0 + 13763 HSDPESDFY 9 80 548.7145668577032 1095.4145807822065 2 548.7145873904228 MULTI CID FTMS 0 0 0 6093 263436.4375 0.3100353743329983 3 -0.1135368347167968 1 Unmodified _HSDPESDFY_ ENSG00000119760|ENST00000337768|SUPT7L;nc|ENSG00000119760|O94864-2|SUPT7L 48.345845343767074 0.0439967357579942 2 [HS]D{[CT]|[{M(Oxidation (M))|F}G]}[HS]{M(Oxidation (M))|F}Y 9 3 + 35.709 0.0 0.0 3.2598 3.2598 73.323 0.0 0.0 0.0 0.3867301246356973 25.531505892858146 0.3867301246356973 6.064921830680706 0 0.9247425010840048 0.0 1.110924374808178 0.0 [HS]D{[CT]|[{M(Oxidation (M))|F}G]}[HS]{M(Oxidation (M))|F}Y;[HS]{[CT]|[{M(Oxidation (M))|F}G]}D[HS]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}[DP]D[HS]{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q][MN]{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[DS]|[MA]|[CV]|TT}E[WY]Y;{[ES]|[DT]|[{I|L}C]}[YG]E[WY]Y 3.2598;2.7062;2.3173;2.1871;1.7749;1.5 -;-;-;-;-;- 98 1 1.839 49965.7 1.0 2714 3378 6093 DOHH2_400M_050219_2,6094 DOHH2_400M_050219_2,6094,HSDPESDFY True True HSDPESDFY 32.40209 548.714587390423 10167948.0 6093.0 ENSG00000119760|ENST00000337768|SUPT7L;;nc|ENSG00000119760|O94864-2|SUPT7L 8.704248428344727 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6095 32.404 105.0 544040.0 25 0 31396.0 + 28451 PTDPKVVVY 9 107 509.28421753584746 1016.5538821384948 2 509.2848388552666 MULTI CID FTMS 0 0 0 6093 347002.5625 0.0345854498492254 6 -0.3856735229492187 2 Unmodified _PTDPKVVVY_ ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;nc|ENSG00000112297|Q9Y4K1-2|CRYBG1 45.69961567697781 0.0497987121815769 2 [TP]D[VP]KVVY 9 2 + 56.3 0.0 0.0 5.5383 5.5383 80.481 0.0 0.0 0.0 5.095614877720891 14.09256854528806 5.095614877720891 5.095614877720891 0 1.3494850021680094 1.2218487496163564 1.2046820571101349 0.0 [TP]D[VP]KVVY;{[DS]|[MA]|[CV]|TT}A[HV]KVVY;[TP]D[KP]VVVY;{[DS]|[MA]|[CV]|TT}A[HK]VVVY;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[HV]KVVY;[TP][QT][{I|L}P]VVY;[TP]AAS[{I|L}P]VVY;[TP]AA[TP]VVVY;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[HK]VVVY;[KP]D[TP]VVVY 5.5383;5.037;4.8332;4.3319;3.1978;2.8626;2.7397;2.7397;2.4927;2.4598 -;-;+;-;-;-;-;-;-;- + 515 1 1.839 53342.8 1.0 2715 3378 6093 DOHH2_400M_050219_2,6095 DOHH2_400M_050219_2,6095,PTDPKVVVY True True PTDPKVVVY 32.404327 509.284838855267 114285608.0 6093.0 ENSG00000112297|ENST00000633556|CRYBG1;;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;;nc|ENSG00000112297|Q9Y4K1-2|CRYBG1 5.492104530334473 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6096 32.406 87.0 726750.0 25 0 43492.0 + 5305 DLDHSIGTQY 10 96 574.7639735510483 1147.5133941688964 2 574.7644531130791 MULTI CID FTMS 0 0 0 6093 588578.3125 0.3825503009461092 -3 0.2020454406738281 3 Unmodified _DLDHSIGTQY_ ENSG00000092203|ENST00000448790|TOX4;nc|ENSG00000092203|O94842-2|TOX4 62.57269311338072 0.0298375429882549 2 {NN|[MP]|[D{I|L}]|[EV]}[HS]D{I|L}GTQY 10 2 + 73.184 0.0 0.0 6.3776 6.3776 77.063 0.0 0.0 0.0 6.640458950831075 16.53212513775344 6.640458950831075 0.2422750325201406 0 0.8494850021680094 1.6989700043360187 1.7059771852360797 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}[HS]D{I|L}GTQY;{NN|[MP]|[D{I|L}]|[EV]}[HD]S{I|L}GTQY;[AG]T[HN]S{I|L}GTQY;{NN|[MP]|[D{I|L}]|[EV]}[HS]D{I|L}GT[AG]Y;{NN|[MP]|[D{I|L}]|[EV]}[HD]S{I|L}GT[AG]Y;[AG]Y[{M(Oxidation (M))|F}E]{I|L}GTQY;[HD]S{I|L}D{I|L}GTQY;{[SA]|[TG]}A[HN]S{I|L}GTQY;[AG]T[HN]S{I|L}GT[AG]Y;[YE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}GTQY 6.3776;6.3565;5.799;5.579;5.5579;5.3683;5.3034;5.1736;5.0035;4.9848 -;+;-;-;-;-;-;-;-;- + 804 1 1.839 52718.5 1.0 2716 3378 6093 DOHH2_400M_050219_2,6096 DOHH2_400M_050219_2,6096,DLDHSIGTQY True True DLDHSIGTQY 32.406269 574.764453113079 16304625.0 6093.0 ENSG00000092203|ENST00000448790|TOX4;;nc|ENSG00000092203|O94842-2|TOX4 8.2640749613444 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6097 32.409 113.0 457310.0 25 0 58333.0 34541 SPAPSQRDGT 10 95 508.2416620535681 1014.4687711739364 2 508.2417480349541 MULTI CID FTMS 0 0 0 6093 383849.125 0.7462841396821662 -2 0.1541709899902343 4 Unmodified _SPAPSQRDGT_ ENSG00000140323|ENST00000267889|DISP2 13.90604991867851 0.6142120002215601 2 MRMVY 5 9 26.07 0.0 0.0 2.5698 0.0 0.0 316.159824496005 0.0 316.159824496005 0.0 9.955926279240703 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.3494850021680094 MRMVY 2.5698 - 240 + 1 1.839 45696.2 1.0 2717 3378 6093 DOHH2_400M_050219_2,6097 DOHH2_400M_050219_2,6097,SPAPSQRDGT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6098 32.411 139.0 426160.0 25 0 16759.0 + 6819 EEAQFETKKLY 11 94 693.351827338724 1384.689101744248 2 693.3520385622978 MULTI CID FTMS 0 0 0 6093 357844.15625 0.6827848263691666 -2 0.1541709899902343 5 Unmodified _EEAQFETKKLY_ ENSG00000183291|ENST00000331835|SELENOF;ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF 42.86227185956083 0.1683040442241701 2 EEAQ{M(Oxidation (M))|F}ETKK{I|L}Y 11 0 + 58.905 0.0 0.0 4.254 4.254 86.023 0.0 0.0 0.0 42.555940216541146 13.08092317009784 13.08092317009784 58.90488343093242 0 1.6677353201839438 1.5228787452803376 0.0 0.0 + + EEAQ{M(Oxidation (M))|F}ETKK{I|L}Y 4.254 + + 407 + 1 1.839 51409.1 1.0 2718 3378 6093 DOHH2_400M_050219_2,6098 DOHH2_400M_050219_2,6098,EEAQFETKKLY False True EEAQFETKKLY 32.411442 693.352038562298 6892020.5 6093.0 ENST00000331835.9_2_1:87346375-87379803:-|nuORF;;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;;nc|ENSG00000183291|O60613-2|SELENOF;;ENSG00000183291|ENST00000331835|SELENOF 7.566739559173584 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6099 32.416 237.0 520460.0 25 0 79415.0 + 32756 SEDHSGSYW 9 120 534.207009234381 1066.3994655355618 2 534.2068969607353 MULTI CID FTMS 0 0 0 6093 321810.09375 0.997090136537885 -1 0.0845870971679687 6 Unmodified _SEDHSGSYW_ chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161681590-161683167:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-11|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-14|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-4|FCRLA;nc|ENSG00000132185|Q7L513-5|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 67.34385681178166 0.0221257235307089 2 [HD]{[ES]|[DT]|[{I|L}C]}SGSYW 9 3 + 55.451 0.0 0.0 5.1998 5.1998 76.707 0.0 0.0 0.0 5.352124803540619 27.845591983606816 5.352124803540619 3.0102999566398125 0 0.9247425010840048 1.0969100130080565 1.66944517631652 0.0 [HD]{[ES]|[DT]|[{I|L}C]}SGSYW;[HD]{[MG]|[TS]}DGSYW;{[ES]|[DT]|[{I|L}C]}[HD]SGSYW;{[MG]|[TS]}[HD]DGSYW;[HS]{[ES]|[DT]|[{I|L}C]}DGSYW;{[ES]|[DT]|[{I|L}C]}[HS]DGSYW;{[CT]|[{M(Oxidation (M))|F}G]}YSGS[MD]G{M(Oxidation (M))|F};[HD]{[ES]|[DT]|[{I|L}C]}AC(Carbamidomethyl (C))YW;[HD]{[ES]|[DT]|[{I|L}C]}SG[MT]G{M(Oxidation (M))|F};[HD]{[MG]|[TS]}S[DG]YW 5.1998;4.9175;4.1712;3.9913;3.9369;3.8889;3.6108;3.0705;2.411;2.3234 -;-;+;-;-;-;-;-;-;- + 218 1 1.839 94819.5 1.0 2719 3378 6093 DOHH2_400M_050219_2,6099 DOHH2_400M_050219_2,6099,SEDHSGSYW True True SEDHSGSYW 32.415888 534.206896960735 1905052.25 6093.0 ENST00000470841.1_1_1:161681590-161683167:+|nuORF;;nc|ENSG00000132185|Q7L513-11|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-3|FCRLA;;chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;nc|ENSG00000132185|Q7L513-4|FCRLA;;nc|ENSG00000132185|Q7L513-14|FCRLA;;nc|ENSG00000132185|Q7L513-5|FCRLA 7.990142186482747 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6100 32.418 120.0 550120.0 25 0 72306.0 + 42731 VVDISQQY 8 104 476.24295903741785 950.4713651416356 2 476.2426025271416 MULTI CID FTMS 0 0 0 6093 309149.0 1.0 0 0.0 7 Unmodified _VVDISQQY_ ENSG00000168303|ENST00000306984|MPLKIP 26.34127834903884 0.4900704351052977 2 VVD{I|L} 4 4 25.713 0.0 0.0 2.7053 0.0 0.0 0.0 521.2011984758732 521.2011984758732 2.2134030500787816 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + VVD{I|L} 2.7053 + + 190 1 1.839 56341.7 1.0 2720 3378 6093 DOHH2_400M_050219_2,6100 DOHH2_400M_050219_2,6100,VVDISQQY False True VVDISQQY 32.418367 476.242602527142 2235405.0 6093.0 ENSG00000168303|ENST00000306984|MPLKIP 3.712813218434652 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6101 32.423 260.0 275130.0 25 0 26477.0 + 559 AEIGYRNSL 9 91 511.7666126748574 1021.5186724165148 2 511.7665283083916 MULTI CID FTMS 0 0 0 6093 159891.734375 0.7921905709461228 -1 0.0845870971679687 8 Unmodified _AEIGYRNSL_ ENSG00000112742|ENST00000369798|TTK;nc|ENSG00000112742|P33981-2|TTK 38.17557092003332 0.0854718145212029 2 {[CP]|[EA]}{I|L}GY[RN]S{I|L} 9 0 + 31.731 0.0 0.0 3.1063 3.1063 80.698 0.0 0.0 0.0 19.51277581011024 3.275650755910004 3.275650755910004 20.01458443827804 0 0.9247425010840048 0.0 0.7302046884880937 0.0 + + {[CP]|[EA]}{I|L}GY[RN]S{I|L};{[CP]|[EA]}{I|L}{[QS]|[NT]}RRY 3.1063;1.147 +;- + 83 + 1 1.839 57570.6 1.0 2721 3378 6093 DOHH2_400M_050219_2,6101 DOHH2_400M_050219_2,6101,AEIGYRNSL True True AEIGYRNSL 32.423198 511.766528308392 827571.9375 6093.0 ENSG00000112742|ENST00000369798|TTK;;nc|ENSG00000112742|P33981-2|TTK 5.4820553461710615 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6102 32.427 217.0 614380.0 25 0 69341.0 + 44032 YIIKDKHIL 9 113 381.5691474194063 1141.6856128584188 3 381.5691406130791 MULTI CID FTMS 0 0 0 6093 148189.25 0.15810174523995 -3 0.2020454406738281 9 Unmodified _YIIKDKHIL_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 38.61474834105838 0.0830609365873449 2 Y{I|L}{I|L}KDKH{I|L}{I|L} 9 0 + 71.768 0.0 0.0 6.2861 6.2861 94.067 0.0 0.0 0.0 43.00743356495616 11.348200093054714 11.348200093054714 71.76776279517917 0 0.3252574989159953 1.6989700043360187 0.8494850021680094 0.0 + + Y{I|L}{I|L}KDKH{I|L}{I|L} 6.2861 + + 191 + 1 1.839 106949.2 1.0 2722 3378 6093 DOHH2_400M_050219_2,6102 DOHH2_400M_050219_2,6102,YIIKDKHIL True True YIIKDKHIL 32.427312 381.569140613079 5351819.5 6093.0 ENST00000591595.5_1_19:11130023-11172489:+|nuORF;;ENSG00000080503|ENST00000349721|SMARCA2;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;nc|ENSG00000080503|P51531-2|SMARCA2;;ENSG00000127616|ENST00000344626|SMARCA4;;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 3.4448629220326743 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6103 32.441 800.0 141470.0 25 0 17835.0 + 8393 ESEDPNYYQY 10 138 654.257041954325 1306.49953097545 2 654.2587158083916 MULTI CID FTMS 0 0 0 6093 105589.0546875 1.0 0 0.0 10 Unmodified _ESEDPNYYQY_ ENSG00000174428|ENST00000472837|GTF2IRD2B;ENSG00000196275|ENST00000451013|GTF2IRD2;nc|ENSG00000196275|Q86UP8-3|GTF2IRD2 60.07390631473393 0.0363923079357811 2 [NP]YDE{[ES]|[DT]|[{I|L}C]}Y[YQ] 10 6 + 24.6 0.0 0.0 1.8829 1.8829 64.889 0.0 0.0 0.0 1.1564876777151696 2.706274456414441 1.1564876777151696 0.7918124604762511 0 0.2396518287104437 0.0 0.7134679910804405 0.5402877273156862 [NP]YDE{[ES]|[DT]|[{I|L}C]}Y[YQ];[NP]YED{[ES]|[DT]|[{I|L}C]}Y[YQ];[NP]YY[C(Carbamidomethyl (C))H]Y[YQ];[NP]Y[C(Carbamidomethyl (C))H]YY[YQ];[AG]YY{[C(Carbamidomethyl (C))G]|[NC]}YY[YQ];[AG]YDPD{[ES]|[DT]|[{I|L}C]}Y[YQ];[NP]DE{[ES]|[DT]|[{I|L}C]}YY[YQ];[YQ]DPD{[ES]|[DT]|[{I|L}C]}Y[YQ];YYE{[ES]|[DT]|[{I|L}C]}YY[YQ];[{M(Oxidation (M))|F}V]QDE{[ES]|[DT]|[{I|L}C]}Y[YQ] 1.8829;1.8223;1.772;1.6764;1.6426;1.619;1.509;1.4838;1.4761;1.4562 -;-;-;-;-;-;-;-;-;- 1103 1 1.839 88712.5 0.6499999761581421 2723 3378 6093 DOHH2_400M_050219_2,6103 DOHH2_400M_050219_2,6103,ESEDPNYYQY True True ESEDPNYYQY 32.44115 654.258715808392 752492.625 6093.0 ENSG00000174428|ENST00000472837|GTF2IRD2B;;ENSG00000196275|ENST00000451013|GTF2IRD2;;nc|ENSG00000196275|Q86UP8-3|GTF2IRD2 7.308712959289551 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6105 32.446 102.0 390780.0 25 0 20698.0 + 42185 VSDYLRQSY 9 72 565.7780674849062 1129.5415820366122 2 565.7781860232353 MULTI CID FTMS 0 0 0 6104 262085.546875 0.3954293359757094 2 -0.0677680969238281 1 Unmodified _VSDYLRQSY_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 34.93206674587334 0.1032771302489716 2 VSDYRVQTY 9 3 + 68.51 0.0 0.0 6.0653 6.0653 81.776 0.0 0.0 0.0 53.90600959017256 9.085390679490075 9.085390679490075 4.471128017558641 0 1.1677353201839438 1.2218487496163564 0.0 0.0 VSDYRVQTY;VSDYR[Q{I|L}]SY;VSDY[VG]VQTY;VSDY{I|L}[RN]TY;VSDY[VG][Q{I|L}]SY;VSDYAA{I|L}QTY;VSDYAA[RV]SY 6.0653;5.6695;5.2501;5.1613;4.8543;4.5019;4.1061 -;-;-;-;-;-;- 129 + 1 1.839 39083.0 1.0 2724 3379 6104 DOHH2_400M_050219_2,6105 DOHH2_400M_050219_2,6105,VSDYLRQSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6106 32.456 592.0 243060.0 25 0 30877.0 + 25824 NLAQRNVAL 9 146 499.790777510252 997.567002087304 2 499.7909423708916 MULTI CID FTMS 0 0 0 6104 122325.7578125 0.9689432756832488 -1 0.0457687377929687 2 Unmodified _NLAQRNVAL_ ENSG00000074356|ENST00000389005|NCBP3 41.8396318013385 0.0653578398400075 2 {[QV]|[N{I|L}]|[RA]|[KV]}A[RN]AGVA{I|L} 10 3 + 65.294 0.0 0.0 6.5453 6.5453 82.11 0.0 0.0 0.0 27.408780598987207 50.690096506118266 27.408780598987207 3.424226808222059 0 1.3807196863200843 2.0 0.0 0.1643943297944484 {[QV]|[N{I|L}]|[RA]|[KV]}A[RN]AGVA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A[NG]VAGVA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A[RN]QVA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A[NG]VARA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A[NG]VQVA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[QN]|[E{I|L}]|[KN]}VAGVA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A[RN]{I|L}NA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A[NG]{I|L}GGVA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[QN]|[E{I|L}]|[KN]}VARA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A[NG]V{I|L}NA{I|L} 6.5453;6.2021;5.8905;5.8447;5.5429;5.52;5.4123;5.3549;5.1669;5.0646 -;-;-;-;-;-;-;-;-;- 1480 1 1.839 110820.4 1.0 2725 3379 6104 DOHH2_400M_050219_2,6106 DOHH2_400M_050219_2,6106,NLAQRNVAL True True NLAQRNVAL 32.456285 499.790942370892 657011.8125 6104.0 ENSG00000074356|ENST00000389005|NCBP3 5.49120044708252 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6108 32.463 166.0 557020.0 25 0 112380.0 + 45895 YYSPHGHIL 9 99 362.8503328944512 1085.5291692835538 3 362.8504211306572 MULTI CID FTMS 0 0 0 6107 364741.78125 0.8405877794133311 1 -0.0526313781738281 1 Unmodified _YYSPHGHIL_ ENSG00000144895|ENST00000460851|EIF2A;nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A 34.18733598223924 0.1073653526364521 2 YYSPHGH{I|L}{I|L} 9 0 + 43.488 0.0 0.0 4.0062 4.0062 84.885 0.0 0.0 0.0 28.645162531850872 5.607887415777533 5.607887415777533 43.48821264658569 0 0.0 2.0 0.0 0.0 + + YYSPHGH{I|L}{I|L} 4.0062 + + 162 + 1 1.844 80757.5 1.0 2726 3380 6107 DOHH2_400M_050219_2,6108 DOHH2_400M_050219_2,6108,YYSPHGHIL True True YYSPHGHIL 32.463414 362.850421130657 3228989.1875 6107.0 nc|ENSG00000144895|Q9BY44-2|EIF2A;;nc|ENSG00000144895|Q9BY44-4|EIF2A;;nc|ENSG00000144895|Q9BY44-3|EIF2A;;ENSG00000144895|ENST00000460851|EIF2A 8.228633244832357 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6109 32.467 162.0 352340.0 25 0 36149.0 + 45896 YYSPHGHIL 9 90 543.7723261947689 1085.5300994563377 2 543.7718994021416 MULTI CID FTMS 0 0 0 6107 183109.3125 0.9993025600794736 1 -0.0526313781738281 2 Unmodified _YYSPHGHIL_ ENSG00000144895|ENST00000460851|EIF2A;nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A 53.57557251787612 0.0325303259649373 2 YYSPHGH{I|L}{I|L} 9 0 + 77.356 0.0 0.0 7.1261 7.1261 96.482 0.0 0.0 0.0 51.314909133867545 6.605569361261317 6.605569361261317 68.92756219235841 0 1.1549471895720984 2.0 0.0 0.0 + + YYSPHGH{I|L}{I|L};{[HG]|PP}HPSYY{I|L}{I|L} 7.1261;0.7764 +;- + 223 + 1 1.844 45354.4 1.0 2727 3380 6107 DOHH2_400M_050219_2,6109 DOHH2_400M_050219_2,6109,YYSPHGHIL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6110 32.471 249.0 306630.0 25 0 16249.0 -1 HREVWLCNCCH 11 114 524.2205285298414 1569.6397561897245 3 524.2207519412041 MULTI CID FTMS 0 0 0 6107 264286.40625 0.6877429711429265 -1 0.01513671875 3 3 Carbamidomethyl (C) _HREVWLC(Carbamidomethyl (C))NC(Carbamidomethyl (C))C(Carbamidomethyl (C))H_ ENST00000301788.11_1_11:62529053-62530368:+|nuORF 0.5059551277355931 0.8727608062196215 2 PHA[MT]STV{M(Oxidation (M))|F}DK 11 -1 58.09 0.0 0.0 3.7008 0.0 0.0 337.0570799049245 0.0 337.0570799049245 0.0 44.9907979724488 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.2742275032520141 PHA[MT]STV{M(Oxidation (M))|F}DK 3.7008 - 469 + 1 1.844 59661.3 1.0 2728 3380 6107 DOHH2_400M_050219_2,6110 DOHH2_400M_050219_2,6110,HREVWLCNCCH False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6111 32.475 213.0 433320.0 25 0 41510.0 + 6343 DVMIRKEEL 9 115 566.8054421773254 1131.5963314214507 2 566.8055297732353 MULTI CID FTMS 0 0 0 6107 254085.734375 0.7025471702596552 -1 0.01513671875 4 Unmodified _DVMIRKEEL_ nc|ENSG00000162385|P61326-2|MAGOH 47.7319792270244 0.0453426645642791 2 DVM{I|L} 4 5 58.175 0.0 0.0 5.141 0.0 0.0 0.0 670.3525852968681 670.3525852968681 25.96910013008056 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + DVM{I|L} 5.141 + + 248 + 1 1.844 75061.3 1.0 2729 3380 6107 DOHH2_400M_050219_2,6111 DOHH2_400M_050219_2,6111,DVMIRKEEL True True DVMIRKEEL 32.475289 566.805529773235 2070781.25 6107.0 nc|ENSG00000162385|P61326-2|MAGOH 5.439471403757731 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6112 32.481 329.0 321240.0 25 0 29007.0 + 22989 LSGTVLQYL 9 127 497.2844734456675 992.554393958135 2 497.2845031619072 MULTI CID FTMS 0 0 0 6107 215525.578125 0.4883695660640427 -2 0.0609054565429687 5 Unmodified _LSGTVLQYL_ REV__nc|ENSG00000120049|Q9NS61-4|KCNIP2 34.40172386719151 0.1061884637610825 2 {[TV]|[{I|L}S]}GTV{I|L}AGY{I|L} 10 -1 + 55.681 0.0 0.0 5.6099 5.6099 75.261 0.0 0.0 0.0 0.6445274728868498 15.026975159433531 0.6445274728868498 0.6445274728868498 0 0.805462187404089 0.638272163982407 1.3441876774005248 0.0 {[TV]|[{I|L}S]}GTV{I|L}AGY{I|L};{[ET]|[MV]}KV{I|L}AGY{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV{I|L}AGY{I|L};[TA][VS]V{I|L}AGY{I|L};{[TV]|[{I|L}S]}GTV{I|L}QY{I|L};{[ET]|[MV]}KV{I|L}QY{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV{I|L}QY{I|L};{[DS]|[MA]|[CV]|TT}[VG]V{I|L}AGY{I|L};[TA][VS]V{I|L}QY{I|L};{[DS]|[MA]|[CV]|TT}[VG]V{I|L}QY{I|L} 5.6099;5.5449;5.4936;4.636;4.6241;4.5646;4.5132;3.9312;3.6502;2.9454 -;-;-;-;+;-;-;-;-;- + 519 1 1.844 82174.1 1.0 2730 3380 6107 DOHH2_400M_050219_2,6112 DOHH2_400M_050219_2,6112,LSGTVLQYL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6113 32.495 800.0 134080.0 25 0 9127.7 + 41979 VQMHKMKQCLQ 11 114 731.8506976422266 1461.686842351253 2 731.8484374880791 MULTI CID FTMS 0 0 0 6107 103751.234375 0.649753923307443 -2 0.0609054565429687 6 Carbamidomethyl (C),2 Oxidation (M) _VQM(Oxidation (M))HKM(Oxidation (M))KQC(Carbamidomethyl (C))LQ_ REV__ENSG00000106546|ENST00000242057|AHR 56.17704186161178 0.0846604386095034 2 {[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q 12 -1 + 92.493 0.0 0.0 6.3278 6.3278 81.745 0.0 0.0 0.0 27.948923575332984 71.87051416493551 27.948923575332984 3.601514477826385 0 2.5 2.0 0.0 1.8441876774005248 {[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NT[C(Carbamidomethyl (C))K][HM]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NTWC{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NTHHWWN{I|L}Q;{[NV]|[RG]}QE[WD]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PEEQR{[HG]|PP}[HT]Q;{[NV]|[RG]}QE[WD]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q 6.3278;6.0814;5.7378;5.6418;5.3744;4.9324;4.762;3.9623;3.868;3.7159 -;-;-;-;-;-;-;-;-;- 577 1 1.844 79157.0 0.6000000238418579 2731 3380 6107 DOHH2_400M_050219_2,6113 DOHH2_400M_050219_2,6113,VQMHKMKQCLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6114 32.509 800.0 104270.0 25 0 5579.1 -1 0 75 765.9808923574137 2294.920847672441 3 766.3165771365166 MULTI CID FTMS 0 0 0 6107 92531.5703125 1.0 0 0.0 7 2 Y 1 -1 13.979 0.0 0.0 0.60915 0.0 0.0 2113.846474358768 0.0 2113.846474358768 0.0 2.7422750325201406 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.60915 - 15 + 1 1.844 64427.2 0.5699999928474426 2732 3380 6107 DOHH2_400M_050219_2,6114 DOHH2_400M_050219_2,6114, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6116 32.514 20.0 3119300.0 25 0 237430.0 + 36849 TELPKAEKW 9 86 367.86981006901016 1100.5876008072305 3 367.8696777224541 MULTI CID FTMS 0 0 0 6115 2520980.75 0.6041066988539857 3 -0.2721366882324219 1 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 36.506200033944 0.094635877243972 2 {[CT]|[{M(Oxidation (M))|F}G]}KEAKP{I|L}DP 10 8 + 54.914 0.0 0.0 4.9895 4.9895 88.907 0.0 0.0 0.0 3.0444970792913395 39.495557461415416 3.0444970792913395 54.913894895705866 0 0.3494850021680094 0.0 0.3494850021680094 0.0 {[CT]|[{M(Oxidation (M))|F}G]}KEAKP{I|L}DP 4.9895 - 219 1 1.844 58274.8 1.0 2733 3381 6115 DOHH2_400M_050219_2,6116 DOHH2_400M_050219_2,6116,TELPKAEKW True True TELPKAEKW 32.513708 367.869677722454 98966022.0 6115.0 ENSG00000240682|ENST00000393295|ISY1;;nc|ENSG00000240682|Q9ULR0-2|ISY1;;nc|ENSG00000240682|Q9ULR0-1|ISY1 7.370321750640869 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6117 32.516 118.0 685050.0 25 0 72146.0 + 4130 DAPAHHLF 8 88 454.22478894041086 906.4350249476216 2 454.2246581912041 MULTI CID FTMS 0 0 0 6115 329483.25 0.1802168332036449 4 -0.350982666015625 2 Unmodified _DAPAHHLF_ ENSG00000135372|ENST00000257829|NAT10;ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000135372|Q9H0A0-2|NAT10;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8 56.04830969593885 0.114297258605095 2 DAPAHH{I|L}{M(Oxidation (M))|F} 8 0 + 71.363 0.0 0.0 7.8729 7.8729 97.125 0.0 0.0 0.0 37.028937514676485 12.914930551903224 12.914930551903224 35.389180660303694 0 0.9247425010840048 2.0 0.0 0.0 + + DAPAHH{I|L}{M(Oxidation (M))|F};W{M(Oxidation (M))|F}{[SA]|[TG]}H{I|L}{M(Oxidation (M))|F};DA{[RE]|[WV]}[RN]{M(Oxidation (M))|F};HHAP{[DA]|[EG]}{I|L}{M(Oxidation (M))|F};D[HV]{I|L}H{[WT]|[RM]};[PA]HH{[DA]|[EG]}{I|L}{M(Oxidation (M))|F} 7.8729;3.9687;3.9123;2.5105;2.3454;1.8142 +;-;-;-;-;- + 162 + 1 1.844 67432.7 1.0 2734 3381 6115 DOHH2_400M_050219_2,6117 DOHH2_400M_050219_2,6117,DAPAHHLF True True DAPAHHLF 32.516158 454.224658191204 21488762.0 6115.0 nc|ENSG00000135372|Q9H0A0-2|NAT10;;ENSG00000135372|ENST00000257829|NAT10;;ENSG00000204962|ENST00000531613|PCDHA8;;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8 7.922969818115234 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6118 32.517 49.0 1409400.0 25 0 77355.0 + 7389 EGGIVSKNF 9 86 475.75090341042494 949.48725388765 2 475.7509338259697 MULTI CID FTMS 0 0 0 6115 1026901.4375 0.3470906189503641 -2 0.0677680969238281 3 Unmodified _EGGIVSKNF_ ENSG00000152137|ENST00000281938|HSPB8 71.92227651296345 0.0203558744033348 2 {[DA]|[EG]}G{I|L}VSKN{M(Oxidation (M))|F} 9 0 + 59.006 0.0 0.0 6.2146 6.2146 83.257 0.0 0.0 0.0 40.84076652809856 12.86220550087016 12.86220550087016 5.510299956639805 0 1.0994850021680094 1.154901959985743 0.0 1.360924374808178 + + {[DA]|[EG]}G{I|L}VSKN{M(Oxidation (M))|F};{[DA]|[EG]}G{I|L}VSKGG{M(Oxidation (M))|F};W[R{I|L}]SKN{M(Oxidation (M))|F};W[R{I|L}]SKGG{M(Oxidation (M))|F};W[KS][R{I|L}]N{M(Oxidation (M))|F};W[KS][R{I|L}]GG{M(Oxidation (M))|F} 6.2146;5.6342;4.0943;3.5011;1.3968;0.80355 +;-;-;-;-;- + 221 + 1 1.844 57246.7 1.0 2735 3381 6115 DOHH2_400M_050219_2,6118 DOHH2_400M_050219_2,6118,EGGIVSKNF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6119 32.52 140.0 533040.0 25 0 38516.0 + 29415 QLEDGRTLSDY 11 93 648.807076441359 1295.5995999495178 2 648.8072997927666 MULTI CID FTMS 0 0 0 6115 372889.125 0.0261084165235177 7 -0.7344856262207031 4 Unmodified _QLEDGRTLSDY_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF 57.24910588100465 0.0803095280301687 2 Q{I|L}EDY 5 6 58.192 0.0 0.0 4.4915 0.0 0.0 0.0 644.2987764947874 644.2987764947874 25.44506439708221 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.4247425010840047 0.0 Q{I|L}EDY 4.4915 - 250 + 1 1.844 59747.5 1.0 2736 3381 6115 DOHH2_400M_050219_2,6119 DOHH2_400M_050219_2,6119,QLEDGRTLSDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6120 32.523 139.0 428470.0 25 0 38996.0 + 2551 ASEPSAQLSY 10 104 526.7479717117495 1051.481390490299 2 526.7487060427666 MULTI CID FTMS 0 0 0 6115 325534.59375 0.3594183051998327 6 -0.6403083801269531 5 Unmodified _ASEPSAQLSY_ ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;nc|ENSG00000131558|Q96A65-2|EXOC4 19.361941925380144 0.5226674314761524 2 {[SA]|[TG]}PQ{I|L}S 6 4 29.592 0.0 0.0 2.8143 0.0 0.0 0.0 465.1606867151615 465.1606867151615 -1.0697139827036928 0.0 -1.0697139827036928 0.0 0 0.0 0.8239087409443188 1.2491348669726232 0.4247425010840047 {[SA]|[TG]}PQ{I|L}S 2.8143 - 274 1 1.844 50371.8 1.0 2737 3381 6115 DOHH2_400M_050219_2,6120 DOHH2_400M_050219_2,6120,ASEPSAQLSY False True ASEPSAQLSY 32.523091 526.748706042767 27854082.0 6115.0 ENSG00000131558|ENST00000253861|EXOC4;;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;;nc|ENSG00000131558|Q96A65-2|EXOC4;;ENST00000462055.5_1_7:132937857-133164897:+|nuORF 5.546280860900879 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6121 32.528 264.0 432070.0 25 0 32516.0 + 2523 ASDKETYELRY 11 113 458.88940851005054 1373.6463961303516 3 458.8891784548759 MULTI CID FTMS 0 0 0 6115 210043.453125 0.2209939520681741 -2 0.0677680969238281 6 Unmodified _ASDKETYELRY_ ENSG00000163584|ENST00000295830|RPL22L1 106.36510571406706 0.0082195558946449 2 ASDKETYE{I|L}RY 11 0 + 131.23 0.0 0.0 9.5534 9.5534 95.978 0.0 0.0 0.0 101.77756452659928 11.006056430243731 11.006056430243731 13.17928856460628 0 1.731295889838706 1.3979400086720375 2.079689690656103 0.3807196863200844 + + ASDKETYE{I|L}RY;ASDKETYEY[R{I|L}];ASDKETYYE[R{I|L}];ASDKETYE[HV][VP];ASWWTYE{I|L}RY;ASDKETYY[{I|L}V]W;ASDKY{[ET]|[MV]}E{I|L}RY;ASDKETY[VP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}A;ASWWTYEY[R{I|L}];ASDKY{[ET]|[MV]}EY[R{I|L}] 9.5534;8.594;8.1361;7.6193;7.168;7.0789;7.0736;6.7817;6.2085;6.1142 +;-;-;-;-;-;-;-;-;- + 2293 + 1 1.844 94329.7 1.0 2738 3381 6115 DOHH2_400M_050219_2,6121 DOHH2_400M_050219_2,6121,ASDKETYELRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6122 32.542 800.0 186330.0 25 0 14317.0 36304 SYKAPYTCGGD 11 165 581.2470130319564 1160.479473130713 2 581.2476074099541 MULTI CID FTMS 0 0 0 6115 133103.359375 0.8387872394204298 -1 0.0526313781738281 7 Unmodified _SYKAPYTCGGD_ ENSG00000185950|ENST00000375856|IRS2 13.614867670302877 0.751941774060705 2 AT[PG]ERAY 8 10 44.131 0.0 0.0 3.8028 0.0 0.0 297.0596994845968 0.0 297.0596994845968 0.0 31.113683631468835 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3252574989159953 AT[PG]ERAY 3.8028 - 3429 + 1 1.844 114345.0 0.6299999952316284 2739 3381 6115 DOHH2_400M_050219_2,6122 DOHH2_400M_050219_2,6122,SYKAPYTCGGD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6123 32.549 391.0 311030.0 25 0 19924.0 + 2525 ASDKETYELRY 11 129 687.8289693988562 1373.6433858645123 2 687.8268310427666 MULTI CID FTMS 0 0 0 6115 97357.859375 0.29630449143923 -1 0.0526313781738281 8 Unmodified _ASDKETYELRY_ ENSG00000163584|ENST00000295830|RPL22L1 76.41605946988834 0.013810787320272 2 ASDKETYE{I|L}RY 11 0 + 111.48 0.0 0.0 8.1155 8.1155 84.916 0.0 0.0 0.0 71.42381955775751 12.060323256818222 12.060323256818222 3.0102999566398125 0 1.305462187404089 1.3010299956639813 1.274227503252014 0.0 + + ASDKETYE{I|L}RY;ASDKEYTE{I|L}RY;ASDKYETE{I|L}RY;ASDKETYE[YG][{I|L}V];ASDKEYTE[YG][{I|L}V];ASDKET[PS]{NN|[MP]|[D{I|L}]|[EV]}S[QP];ASWWTYE{I|L}RY;ASDKERE{NN|[MP]|[D{I|L}]|[EV]}S[QP];ASDKETY[WY][{I|L}V];ASDKEY[VP][PG]S[QP] 8.1155;7.8963;7.185;6.2044;5.9852;5.8234;5.5633;5.4847;5.4459;5.4184 +;-;-;-;-;-;-;-;-;- + 2544 + 1 1.844 90530.1 1.0 2740 3381 6115 DOHH2_400M_050219_2,6123 DOHH2_400M_050219_2,6123,ASDKETYELRY True True ASDKETYELRY 32.548829 687.826831042767 13128650.0 6115.0 ENSG00000163584|ENST00000295830|RPL22L1 9.419628143310549 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6124 32.563 800.0 208970.0 25 0 16052.0 + 29111 QERDFQYGY 9 168 603.2650018570962 1204.5154507809923 2 603.2654296755791 MULTI CID FTMS 0 0 0 6115 85945.3203125 0.5947321580909407 -1 0.0526313781738281 9 Unmodified _QERDFQYGY_ ENSG00000121964|ENST00000682281|GTDC1;ENST00000482601.1_1_2:144885858-144903287:-|nuORF;ENST00000491448.5_1_2:144764747-144969145:-|nuORF;nc|ENSG00000121964|Q4AE62-2|GTDC1;nc|ENSG00000121964|Q4AE62-3|GTDC1;nc|ENSG00000121964|Q4AE62-4|GTDC1;nc|ENSG00000121964|Q4AE62-5|GTDC1 78.7280429016045 0.0178249292250809 2 {[TV]|[{I|L}S]}DN[{M(Oxidation (M))|F}V]QYGY 10 5 + 74.755 0.0 0.0 6.2062 6.2062 76.737 0.0 0.0 0.0 2.7037747709155155 16.53212513775344 2.7037747709155155 0.2950000835532052 0 1.3494850021680094 0.5686362358410126 0.8133414502656053 1.5044321917401078 {[TV]|[{I|L}S]}DN[{M(Oxidation (M))|F}V]QYGY;{[TV]|[{I|L}S]}D[KC]EQYGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RD]{M(Oxidation (M))|F}QYGY;[AG]E[RD]{M(Oxidation (M))|F}QYGY;{[TV]|[{I|L}S]}DN[{M(Oxidation (M))|F}V][AG]YGY;{[TV]|[{I|L}S]}D[KC]E[AG]YGY;[HD][Y{I|L}]{M(Oxidation (M))|F}QYGY;[QT]AE[{M(Oxidation (M))|F}V]QYGY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RD]{M(Oxidation (M))|F}[AG]YGY;[AG]E[RD]{M(Oxidation (M))|F}[AG]YGY 6.2062;6.1817;5.9817;5.9718;5.4454;5.4209;5.3667;5.3224;5.2173;5.211 -;-;+;-;-;-;-;-;-;- + 2196 1 1.844 120912.7 0.5600000023841858 2741 3381 6115 DOHH2_400M_050219_2,6124 DOHH2_400M_050219_2,6124,QERDFQYGY True True QERDFQYGY 32.562662 603.265429675579 689508.6875 6115.0 ENSG00000121964|ENST00000682281|GTDC1;;nc|ENSG00000121964|Q4AE62-3|GTDC1;;nc|ENSG00000121964|Q4AE62-4|GTDC1;;ENST00000482601.1_1_2:144885858-144903287:-|nuORF;;nc|ENSG00000121964|Q4AE62-2|GTDC1;;ENST00000491448.5_1_2:144764747-144969145:-|nuORF;;nc|ENSG00000121964|Q4AE62-5|GTDC1 6.13052241007487 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6125 32.568 296.0 341800.0 25 0 14488.0 + 36949 TEYTPDPNHGF 11 120 638.8187823505293 0 638.8188964724541 PEAK CID FTMS 0 0 0 6115 80290.375 0.7731979673433963 -1 0.0526313781738281 10 Unmodified _TEYMLQKHVQ_ nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT 29.081581746732265 0.2251250799338715 2 YT[C(Carbamidomethyl (C))K]TYT 7 8 17.214 0.0 0.0 1.3495 0.0 0.0 229.17723242743392 126.02004419498282 355.1972766224167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8129529932484498 0.0 YT[C(Carbamidomethyl (C))K]TYT 1.3495 - 220 + 1 1.844 77973.7 1.0 2742 3381 6115 DOHH2_400M_050219_2,6125 DOHH2_400M_050219_2,6125,TEYMLQKHVQ False False TEYTPDPNHGF 32.568103 638.818896472454 983655.375 6115.0 nc|ENSG00000124155|Q969N2-2|PIGT;;nc|ENSG00000124155|Q969N2-6|PIGT;;nc|ENSG00000124155|Q969N2-3|PIGT;;nc|ENSG00000124155|Q969N2-4|PIGT;;ENSG00000124155|ENST00000279036|PIGT;;nc|ENSG00000124155|Q969N2-5|PIGT 4.402818600336711 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6126 32.573 255.0 449970.0 25 0 106990.0 7150 EENKNLQI 8 120 494.2566813550397 0 494.2572509646416 PEAK CID FTMS 0 0 0 6115 170892.21875 0.9458219524291538 2 -0.1804580688476562 11 Unmodified _EENKNLQI_ ENSG00000144395|ENST00000389175|CCDC150 14.581692164780916 0.4900557725783909 2 SQ 2 7 11.86 0.0 0.0 1.2023 0.0 0.0 257.08613657507993 511.3014431171746 768.3875796922546 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 SQ 1.2023 - 316 + 1 1.844 90712.8 1.0 2743 3381 6115 DOHH2_400M_050219_2,6126 DOHH2_400M_050219_2,6126,EENKNLQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6127 32.578 230.0 415950.0 25 0 76693.0 + 42472 VTGLVMARE 9 119 488.26766604127727 0 488.2677795290947 PEAK CID FTMS 0 0 0 6115 98573.546875 0.3169437486887595 17 -1.4041824340820312 12 Unmodified _VTGLVMARE_ REV__ENST00000471198.1_1_3:167344976-167371234:-|nuORF 21.74664581756881 0.185237546287679 2 S 1 -1 6.5495 0.0 0.0 0.67207 0.0 0.0 756.3938240485718 128.07209192447502 884.4659159730468 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 S 0.67207 - 142 + 1 1.844 79258.6 1.0 2744 3381 6115 DOHH2_400M_050219_2,6127 DOHH2_400M_050219_2,6127,VTGLVMARE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6129 32.583 64.0 758590.0 25 0 114290.0 + 36852 TELPKAEKW 9 60 551.3007693186588 1100.5869857041175 2 551.3007079958916 MULTI CID FTMS 0 0 0 6128 585924.375 0.2254515625405821 3 -0.2815818786621094 1 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 32.037481411007896 0.1235546156350648 2 {[ET]|[MV]}{I|L}PKAEKW 9 0 + 36.321 0.0 0.0 3.3002 3.3002 78.783 0.0 0.0 0.0 7.147642715192511 9.208187539523756 7.147642715192511 9.94850021680094 0 1.6989700043360187 0.0 0.0 0.0 + + {[ET]|[MV]}{I|L}PKAEKW;{[ET]|[MV]}{I|L}P{I|L}{[QS]|[NT]}KW;[KP]{[CP]|[EA]}[{I|L}T]EKW 3.3002;2.3962;0.21792 +;-;- + 69 + 1 1.844 41526.4 1.0 2745 3382 6128 DOHH2_400M_050219_2,6129 DOHH2_400M_050219_2,6129,TELPKAEKW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6130 32.585 113.0 536030.0 25 0 64721.0 + 25884 NLIKKTVL 8 90 464.81329606400095 927.612039194802 2 464.8132202029228 MULTI CID FTMS 0 0 0 6128 487148.8125 0.1677521960172745 4 -0.4472541809082031 2 Unmodified _NLIKKTVL_ ENSG00000163811|ENST00000407426|WDR43;ENST00000466067.1_1_2:29147965-29158512:+|nuORF 57.47134341890925 0.1146309765603773 2 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K[KT]V{I|L} 8 0 + 61.08 0.0 0.0 6.5847 6.5847 94.432 0.0 0.0 0.0 23.475052728044545 14.024174299985006 14.024174299985006 39.25968732272281 0 0.9247425010840048 2.0 1.1989700043360187 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K[KT]V{I|L};[K{I|L}]KS{I|L}{I|L}N{I|L};KK{I|L}S{I|L}{I|L}N{I|L};{[TV]|[{I|L}S]}KK{I|L}{I|L}N{I|L};[K{I|L}]KTV{I|L}N{I|L};KK{I|L}TV{I|L}N{I|L};{[TV]|[{I|L}S]}[K{I|L}]K{I|L}N{I|L};[K{I|L}]{[TV]|[{I|L}S]}K{I|L}N{I|L} 6.5847;2.3523;2.2479;2.1649;1.8931;1.7886;1.7057;0.8453 +;-;-;-;-;-;-;- + 217 + 1 1.844 49856.1 1.0 2746 3382 6128 DOHH2_400M_050219_2,6130 DOHH2_400M_050219_2,6130,NLIKKTVL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6131 32.588 97.0 690850.0 25 0 52523.0 + 17377 KMEKSNTNW 9 92 569.2707046684566 1136.526856403713 2 569.2711669802666 MULTI CID FTMS 0 0 0 6128 439397.9375 1.0 0 0.0 3 Unmodified _KMEKSNTNW_ ENSG00000135040|ENST00000361671|NAA35;nc|ENSG00000135040|Q5VZE5-2|NAA35 43.77239144664712 0.0547478964384323 2 [PS]WYSKPSW 9 7 + 88.331 0.0 0.0 7.772 7.772 93.78 0.0 0.0 0.0 13.212112250009652 71.34102222725673 13.212112250009652 11.460828060918828 0 1.6861818737241734 0.7958800173440752 1.066901560044258 0.4247425010840047 [PS]WYSKPSW;[PS]WYSKSPW;[VG][MT][MT]KPSW;{[DS]|[MA]|[CV]|TT}W[MT]KPSW;[YQ]PK[MT]PSW;{[CT]|[{M(Oxidation (M))|F}G]}SPK[MT]PSW;{[CT]|[{M(Oxidation (M))|F}G]}PSK[MT]PSW;[YQ]P[MT]KPSW;[YQ]P[MT]KSPW;{[CT]|[{M(Oxidation (M))|F}G]}SPK[MT]WSP 7.772;6.7636;5.5067;5.313;5.0605;4.9967;4.8681;4.803;4.6745;4.6577 -;-;-;-;-;-;-;-;-;- 428 1 1.844 56100.5 1.0 2747 3382 6128 DOHH2_400M_050219_2,6131 DOHH2_400M_050219_2,6131,KMEKSNTNW True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6132 32.591 165.0 622880.0 25 0 149170.0 + 34028 SLKEKIYRL 9 93 383.90415304038993 1148.6906297213698 3 383.9044372439384 MULTI CID FTMS 0 0 0 6128 269727.53125 1.0 0 0.0 4 Unmodified _SLKEKIYRL_ ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:676972-730286:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1 42.83518252547288 0.0598927335801051 2 S{I|L}KEK{I|L}{I|L}[YR] 9 2 + 94.218 0.0 0.0 8.2022 8.2022 83.582 0.0 0.0 0.0 1.901056208558032 4.471580313422194 1.901056208558032 1.901056208558032 0 1.1549471895720984 2.0 0.3807196863200844 0.4247425010840047 S{I|L}KEK{I|L}{I|L}[YR];{I|L}SKEK{I|L}{I|L}[YR];S{I|L}KEK{I|L}YR{I|L};{I|L}SKEK{I|L}YR{I|L};S{I|L}KE{I|L}K{I|L}[YR];{I|L}SKE{I|L}K{I|L}[YR];S{I|L}KE{I|L}KYR{I|L};S{I|L}{I|L}[SG]K{I|L}{I|L}[YR];{I|L}SKE{I|L}KYR{I|L};{I|L}S{I|L}[SG]K{I|L}{I|L}[YR] 8.2022;8.0367;7.813;7.6475;7.3083;7.1429;6.9191;6.8071;6.7536;6.6416 -;-;+;-;-;-;-;-;-;- + 609 + 1 1.844 87543.8 1.0 2748 3382 6128 DOHH2_400M_050219_2,6132 DOHH2_400M_050219_2,6132,SLKEKIYRL True True SLKEKIYRL 32.590826 383.904437243938 1656654.25 6128.0 ENST00000354485.5_1_9:676972-730286:+|nuORF;;ENSG00000107104|ENST00000382297|KANK1;;ENST00000489369.5_1_9:676972-732786:+|nuORF;;nc|ENSG00000107104|Q14678-2|KANK1 4.282908837000529 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6133 32.599 468.0 252430.0 25 0 25100.0 + 14363 IEVNGKQSW 9 134 530.7749743542112 1059.5353957752222 2 530.7750732302666 MULTI CID FTMS 0 0 0 6128 174704.125 0.2980091895369175 3 -0.2815818786621094 5 Unmodified _IEVNGKQSW_ chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;nc|ENSG00000111913|Q9Y4F9|RIPOR2 74.19965305603844 0.0194755241623067 2 {I|L}EVNGKQSW 9 0 + 101.52 0.0 0.0 9.5814 9.5814 93.772 0.0 0.0 0.0 69.40527250276361 13.46787486224656 13.46787486224656 9.208187539523747 0 1.1549471895720984 1.6989700043360187 1.5669015600442575 1.1549471895720984 + + {I|L}EVNGKQSW;{I|L}EVNGK[AG]SW;{I|L}EVGGGKQSW;{I|L}EVNGK[HT]Y;{I|L}EVNGKQC(Carbamidomethyl (C)){I|L};{I|L}EVGGGK[AG]SW;{I|L}EV[W{I|L}]QSW;{I|L}EVGGGK[HT]Y;{I|L}EVNGKQ[CG]{I|L};{I|L}EVNGK[AG]C(Carbamidomethyl (C)){I|L} 9.5814;8.7123;8.7123;8.1505;8.07;7.8474;7.3834;7.2815;7.201;7.201 +;-;-;-;-;-;-;-;-;- + 2465 + 1 1.844 93095.1 1.0 2749 3382 6128 DOHH2_400M_050219_2,6133 DOHH2_400M_050219_2,6133,IEVNGKQSW True True IEVNGKQSW 32.599124 530.775073230267 5860943.0 6128.0 nc|ENSG00000111913|Q9Y4F9|RIPOR2;;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;;chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;;ENSG00000111913|ENST00000643898|RIPOR2 7.163824240366618 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6134 32.604 270.0 246930.0 25 0 31017.0 37321 TITTKGERGQ 10 103 545.7940924266331 0 545.7933227419853 PEAK CID FTMS 0 0 0 6128 132508.90625 0.4785900645962868 -3 0.1371688842773437 6 Unmodified _TITTKGERGQ_ ENSG00000134871|ENST00000360467|COL4A2 18.1463463914782 0.3130158145628772 2 TSSAV 5 9 18.443 0.0 0.0 1.6927 0.0 0.0 112.03881222862658 529.2987154596311 641.3375276882578 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TSSAV 1.6927 - 145 + 1 1.844 54805.1 1.0 2750 3382 6128 DOHH2_400M_050219_2,6134 DOHH2_400M_050219_2,6134,TITTKGERGQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6135 32.618 800.0 266800.0 25 0 26127.0 + 44003 YIDQGRNPQLY 11 141 683.8415675598922 1365.6685821865842 2 683.8406860232353 MULTI CID FTMS 0 0 0 6128 129289.5078125 0.0961892841891191 -2 0.1220321655273437 7 Unmodified _YIDQGRNPQLY_ ENSG00000133398|ENST00000255764|MED10;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 73.1962812333195 0.0231417158388345 2 Y{I|L}DKNY{M(Oxidation (M))|F}Q{I|L}Y 10 5 + 103.22 0.0 0.0 7.5579 7.5579 90.979 0.0 0.0 0.0 54.8345587862628 14.146518864155126 14.146518864155126 9.164539485499262 0 2.441962823435958 2.0 0.9247425010840048 1.174742501084005 Y{I|L}DKNY{M(Oxidation (M))|F}Q{I|L}Y;Y{I|L}DKGGY{M(Oxidation (M))|F}Q{I|L}Y;Y{I|L}DK[HM]{[VA]|[{I|L}G]}N{I|L}Y;Y{I|L}DKN{[ET]|[MV]}[HA]{I|L}Y;[Y{I|L}]DKY{M(Oxidation (M))|F}KN{I|L}Y;Y{I|L}DKN{[ET]|[MV]}{I|L}[HA]Y;[Y{I|L}]T[R{M(Oxidation (M))|F}]D{I|L}Y{I|L}Y;[Y{I|L}]DKY{M(Oxidation (M))|F}KGG{I|L}Y;Y{I|L}DKN[PG]{[VA]|[{I|L}G]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};Y{I|L}DK[HM]{[VA]|[{I|L}G]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 7.5579;6.8869;6.821;6.4343;6.3336;5.8114;5.7497;5.6625;5.3831;5.3398 -;-;-;-;-;-;-;-;-;- 10424 + 1 1.844 154867.2 0.6800000071525574 2751 3382 6128 DOHH2_400M_050219_2,6135 DOHH2_400M_050219_2,6135,YIDQGRNPQLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6136 32.624 317.0 293200.0 25 0 56715.0 + 26442 NTDSPLRY 8 117 483.2382029454337 964.4618529576676 2 483.2380859255791 MULTI CID FTMS 0 0 0 6128 126247.8671875 0.2873053242416256 6 -0.6650848388671875 8 Unmodified _NTDSPLRY_ ENSG00000168028|ENST00000301821|RPSA;ENST00000437336.1_1_1:154350783-154351305:-|nuORF;ENST00000453374.2_1_1:160236508-160236577:-|nuORF;ENST00000478027.2_1_3:39450050-39453856:+|nuORF;nc|ENSG00000288920|A0A8I5KQE6|RPSA2 37.97399986684836 0.2681860861828418 2 {[QS]|[NT]}DSP{I|L}RY 8 0 + 58.312 0.0 0.0 6.0461 6.0461 91.704 0.0 0.0 0.0 48.31215024481538 11.638568026386691 11.638568026386691 23.60019605175208 0 0.4247425010840047 2.0 0.0 0.3252574989159953 + + {[QS]|[NT]}DSP{I|L}RY;{[QS]|[NT]}DSP[YR]{I|L};{[QS]|[NT]}DSP[HV][VP];{[QS]|[NT]}DKK[C(Carbamidomethyl (C))S]{I|L} 6.0461;3.5991;3.0261;2.799 +;-;-;- + 143 + 1 1.844 77830.7 1.0 2752 3382 6128 DOHH2_400M_050219_2,6136 DOHH2_400M_050219_2,6136,NTDSPLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6137 32.633 499.0 287100.0 25 0 20955.0 + -1 LSLPAPGP 8 182 397.2262180050994 792.4378830769989 2 397.2262145876884 MULTI CID FTMS 0 0 0 6128 116708.734375 0.135391628243805 5 -0.5709075927734375 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSLPAPGP_ REV__ENST00000286494.8_1_12:58005338-58005476:+|nuORF 10.183394434864962 0.7604730176254005 2 {[QN]|[E{I|L}]|[KN]}{I|L}[KQ]Y 6 -1 + 27.291 0.0 0.0 3.4439 3.4439 71.369 0.0 0.0 0.0 13.796218163358212 1.3380312008851547 1.3380312008851547 3.679767852945943 0 0.2396518287104437 1.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}[KQ]Y;{[QN]|[E{I|L}]|[KN]}{I|L}[KG]AY;{[QN]|[E{I|L}]|[KN]}{I|L}[KG]S{M(Oxidation (M))|F} 3.4439;2.9796;1.9796 -;-;- 191 + 1 1.844 114139.8 1.0 2753 3382 6128 DOHH2_400M_050219_2,6137 DOHH2_400M_050219_2,6137,LSLPAPGP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6138 32.642 510.0 188620.0 25 0 20414.0 + 35363 STDPREALQY 10 120 590.2858697027707 1178.5571864723413 2 590.2865478396416 MULTI CID FTMS 0 0 0 6128 103595.6875 0.0551785618102517 7 -0.7144508361816406 10 Unmodified _STDPREALQY_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 41.95555342248728 0.1369168616057562 2 {[MG]|[TS]}[HK]{I|L}[CS]{I|L}QY 10 5 + 37.597 0.0 0.0 3.1901 3.1901 75.304 0.0 0.0 0.0 1.2937092834840769 23.74196130364324 1.2937092834840769 8.49530231754365 0 0.7887254899964358 0.0 0.3054621874040891 0.0 {[MG]|[TS]}[HK]{I|L}[CS]{I|L}QY;[AG]Y[KP][HC]{I|L}QY;[YQ][KP][HC]{I|L}QY;{[MG]|[TS]}[HK]{I|L}[CS]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.1901;2.4693;2.1213;0.67448 -;-;-;- 237 1 1.844 78013.2 1.0 2754 3382 6128 DOHH2_400M_050219_2,6138 DOHH2_400M_050219_2,6138,STDPREALQY False True STDPREALQY 32.641545 590.286547839642 35593332.0 6128.0 nc|ENSG00000102900|Q8N1F7-2|NUP93;;ENSG00000102900|ENST00000308159|NUP93 5.901755174001058 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6139 32.65 415.0 257720.0 25 0 16628.0 11762 GLKKEKFDL 9 129 359.8815248641046 0 359.8815795779228 PEAK CID FTMS 0 0 0 6128 104260.28125 1.0 0 0.0 11 Unmodified _GLKKEKFDL_ ENSG00000174607|ENST00000310836|UGT8 14.838274106304384 0.2567717476666951 2 E 1 8 7.302 0.0 0.0 1.0174 0.0 0.0 162.409764960828 423.2727450006469 585.6825099614749 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + E 1.0174 + + 13 + 1 1.844 89141.4 1.0 2755 3382 6128 DOHH2_400M_050219_2,6139 DOHH2_400M_050219_2,6139,GLKKEKFDL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6140 32.654 194.0 303340.0 25 0 38332.0 + 689 AENAGSYSL 9 77 456.20895338339056 910.4033538335811 2 456.2081481814384 MULTI CID FTMS 0 0 0 6128 102429.2265625 0.4279932058751578 -1 0.0694007873535156 12 Unmodified _AENAGSYSL_ ENSG00000139372|ENST00000392872|TDG;ENST00000544060.1_1_12:104359692-104373925:+|nuORF 21.74664581756881 0.2544899275067181 2 S{I|L} 2 7 20.846 0.0 0.0 2.2898 0.0 0.0 692.2762308861187 0.0 692.2762308861187 0.0 10.34415825039728 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 + S{I|L} 2.2898 + + 54 + 1 1.844 54083.9 1.0 2756 3382 6128 DOHH2_400M_050219_2,6140 DOHH2_400M_050219_2,6140,AENAGSYSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6141 32.668 800.0 156140.0 25 0 5673.2 -1 QSRCEMKTF 9 171 593.7713719800079 1185.5281910268156 2 594.2695190310478 MULTI CID FTMS 0 0 0 -1 0 13 Carbamidomethyl (C) _QSRC(Carbamidomethyl (C))EMKTF_ ENSG00000204610|ENST00000376694|TRIM15 14.838274106304384 0.4350285940865338 2 {[QS]|[NT]}YTM{M(Oxidation (M))|F}NVS 9 -1 22.43 0.0 0.0 1.892 0.0 0.0 0.0 125.0723818414672 125.0723818414672 -5.726884069153986 0.0 -5.726884069153986 0.0 0 0.1677353201839438 0.4202164033831898 0.9925526322920362 0.6694451763165201 {[QS]|[NT]}YTM{M(Oxidation (M))|F}NVS 1.892 - 2862 + 1 1.844 92916.9 0.5199999809265137 2757 3382 6128 DOHH2_400M_050219_2,6141 DOHH2_400M_050219_2,6141,QSRCEMKTF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6142 32.671 183.0 390600.0 25 0 26345.0 -1 0 98 517.2855793377397 516.2783028711397 1 517.2855102419853 MULTI CID FTMS 0 0 0 6128 177862.34375 0.0567659878838479 -6 0.3371086120605469 14 2 {[QD]|[EN]|[WG]|[KD]|[RS]}G 3 -1 11.325 0.0 0.0 2.1935 0.0 0.0 0.0 213.1481813713928 213.1481813713928 0.7286115825723467 0.0 0.0 0.0 0 0.0 0.0 0.6307196863200843 0.3054621874040891 {[QD]|[EN]|[WG]|[KD]|[RS]}G 2.1935 - 16 1 1.844 59971.0 1.0 2758 3382 6128 DOHH2_400M_050219_2,6142 DOHH2_400M_050219_2,6142, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6143 32.676 163.0 680020.0 25 0 118800.0 + 33656 SITNYAHMFY 10 87 416.1896096359352 0 416.1893493533134 PEAK CID FTMS 0 0 0 6128 153328.859375 0.4379480209557102 -1 0.0694007873535156 15 Unmodified _SITNYAHMFY_ REV__ENSG00000080845|ENST00000339266|DLGAP4;REV__nc|ENSG00000080845|Q9Y2H0-1|DLGAP4 13.90604991867851 0.345182617568752 2 P 1 -1 3.9794 0.0 0.0 0.47924 0.0 0.0 614.234125422458 116.05097376041248 730.2850991828705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.47924 - 8 + 1 1.844 94678.6 1.0 2759 3382 6128 DOHH2_400M_050219_2,6143 DOHH2_400M_050219_2,6143,SITNYAHMFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6144 32.689 800.0 186660.0 25 0 12247.0 -1 MDNITRQNQFY 11 132 744.3309771640446 1486.6474013948891 2 744.3305541872978 MULTI CID FTMS 0 0 0 6128 91192.390625 0.1237876313518674 -3 0.1371688842773437 16 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 2 {[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y 12 -1 + 78.092 0.0 0.0 5.2529 5.2529 76.855 0.0 0.0 0.0 7.108285456507161 10.629778129126294 7.108285456507161 3.0102999566398125 0 0.8182503180159344 0.6989700043360187 0.5941876774005248 1.4124379954164592 {[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]A[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}Q[AG]NA{M(Oxidation (M))|F}Y 5.2529;5.0504;5.0261;4.7747;4.6409;4.6409;4.6409;4.6048;4.531;4.4384 -;-;-;-;-;-;-;-;-;- 3503 1 1.844 106257.9 0.6000000238418579 2760 3382 6128 DOHH2_400M_050219_2,6144 DOHH2_400M_050219_2,6144,MDNITRQNQFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6146 32.695 89.0 468270.0 25 0 25096.0 + 5306 DLDHSIGTQY 10 79 574.7639735510483 1147.5133941688964 2 574.7645141482353 MULTI CID FTMS 0 0 0 6145 284113.15625 0.1846611931121509 2 -0.1705245971679687 1 Unmodified _DLDHSIGTQY_ ENSG00000092203|ENST00000448790|TOX4;nc|ENSG00000092203|O94842-2|TOX4 43.85829265575387 0.1168243637355526 2 {NN|[MP]|[D{I|L}]|[EV]}[HD]S{I|L}GTQY 10 0 + 49.314 0.0 0.0 4.2975 4.2975 75.069 0.0 0.0 0.0 5.051499783199063 9.699915470362017 5.051499783199063 4.771212547196626 0 0.3935078169319297 1.5228787452803376 1.3494850021680094 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}[HD]S{I|L}GTQY;{NN|[MP]|[D{I|L}]|[EV]}[HS]D{I|L}GTQY;[HD]{NN|[MP]|[D{I|L}]|[EV]}S{I|L}GTQY;{[TV]|[{I|L}S]}[HD]D{I|L}GTQY;[HD]{[TV]|[{I|L}S]}D{I|L}GTQY;[{M(Oxidation (M))|F}V]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}GTQY;[YE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}GTQY;[HS]QQS{I|L}GTQY;[VS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L}GTQY;[HS]{NN|[MP]|[D{I|L}]|[EV]}D{I|L}GTQY 4.2975;3.8817;3.8573;3.492;3.4415;3.3172;3.0102;2.9014;2.5807;2.4856 +;-;-;-;-;-;-;-;-;- + 175 1 1.85 35821.1 1.0 2761 3383 6145 DOHH2_400M_050219_2,6146 DOHH2_400M_050219_2,6146,DLDHSIGTQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6147 32.698 121.0 537490.0 25 0 57961.0 + 44033 YIIKDKHIL 9 96 381.5691474194063 1141.6856128584188 3 381.5690490603447 MULTI CID FTMS 0 0 0 6145 248965.671875 0.2656191810693032 2 -0.1705245971679687 2 Unmodified _YIIKDKHIL_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 21.59015148037692 0.2564810811560323 2 Y{I|L}{I|L}K 4 5 47.423 0.0 0.0 4.1537 0.0 0.0 0.0 621.3360689752561 621.3360689752561 27.386280136974896 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + Y{I|L}{I|L}K 4.1537 + + 157 + 1 1.85 55526.7 1.0 2762 3383 6145 DOHH2_400M_050219_2,6147 DOHH2_400M_050219_2,6147,YIIKDKHIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6148 32.7 83.0 745630.0 25 0 135330.0 20017 LIMNCCEQCGE 11 79 621.7327002033212 1241.4508474734423 2 621.7335082888603 MULTI CID FTMS 0 0 0 6145 634922.375 0.7527739889531732 -1 0.1110572814941406 3 Unmodified _LIMNCCEQCGE_ ENSG00000121741|ENST00000610343|ZMYM2;ENST00000382881.7_1_13:20532931-20593821:+|nuORF;nc|ENSG00000121741|Q9UBW7-2|ZMYM2 6.623454094837244 0.8438980474264925 2 {I|L}{I|L}DDMNH 7 9 87.995 0.0 0.0 7.0881 0.0 0.0 0.0 400.0634859674438 400.0634859674438 71.81109192601312 0.0 0.0 0.0 0 1.274227503252014 2.0 0.3807196863200844 0.8494850021680094 {I|L}{I|L}DDMNH 7.0881 - 68 + 1 1.85 48663.5 1.0 2763 3383 6145 DOHH2_400M_050219_2,6148 DOHH2_400M_050219_2,6148,LIMNCCEQCGE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6149 32.702 106.0 622140.0 25 0 124950.0 20018 LIMNCCEQCGE 11 92 414.8243033360646 0 414.8242370486259 PEAK CID FTMS 0 0 0 6145 560550.9375 1.0 0 0.0 4 Unmodified _LIMNCCEQCGE_ ENSG00000121741|ENST00000610343|ZMYM2;ENST00000382881.7_1_13:20532931-20593821:+|nuORF;nc|ENSG00000121741|Q9UBW7-2|ZMYM2 2.6312355333042263 0.4761840153648598 2 DN 2 10 13.271 0.0 0.0 1.6035 0.0 0.0 58.42422815474794 537.1229342096311 595.5471623643791 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 DN 1.6035 - 32 + 1 1.85 60146.9 1.0 2764 3383 6145 DOHH2_400M_050219_2,6149 DOHH2_400M_050219_2,6149,LIMNCCEQCGE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6150 32.704 84.0 824680.0 25 0 166040.0 + 19095 LDSAGRVW 8 75 452.2377602553734 902.4609675775469 2 452.2376586794853 MULTI CID FTMS 0 0 0 6145 533963.9375 0.7294834713531175 -1 0.1110572814941406 5 Unmodified _LDSAGRVW_ ENSG00000188811|ENST00000379600|NHLRC3;nc|ENSG00000188811|Q5JS37-2|NHLRC3 20.453626601364224 0.6087503291685402 2 {I|L}DSQTWS 7 5 56.663 0.0 0.0 6.2787 0.0 0.0 0.0 82.06688867740468 82.06688867740468 42.68314508765954 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}DSQTWS 6.2787 - 122 + 1 1.85 60514.1 1.0 2765 3383 6145 DOHH2_400M_050219_2,6150 DOHH2_400M_050219_2,6150,LDSAGRVW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6151 32.706 112.0 982800.0 25 0 109590.0 + 18447 KYFDEHYEY 9 101 647.2748017189234 1292.5350505046467 2 647.2747680544853 MULTI CID FTMS 0 0 0 6145 478719.4375 0.0073170152152276 -2 0.1804580688476562 6 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 128.93241758739586 0.006154487147897 2 KY{M(Oxidation (M))|F}DEHYEY 9 0 + 91.22 0.0 0.0 7.0575 7.0575 88.099 0.0 0.0 0.0 19.298843860916463 14.973024840566438 14.973024840566438 7.723622073595948 0 3.3076556684809653 0.0 1.4143943297944483 0.0 + + KY{M(Oxidation (M))|F}DEHYEY;[YE]HD{M(Oxidation (M))|F}KYEY;KY{M(Oxidation (M))|F}DE[QA]TEY;[YE]HAYRYEY;[YE]HD{M(Oxidation (M))|F}YKEY;KY{M(Oxidation (M))|F}YY{[MS]|[{M(Oxidation (M))|F}A]}EY;[YE]HD{M(Oxidation (M))|F}YEKY;KY{M(Oxidation (M))|F}D[QA]ETEY;[YK]{M(Oxidation (M))|F}DEHYEY;{[YC]|[HE]}D{M(Oxidation (M))|F}YKYEY 7.0575;6.4599;6.2969;6.2645;5.9965;5.7704;5.5514;5.542;5.4744;5.2797 +;-;-;-;-;-;-;-;+;- + 2924 + 1 1.85 90685.4 1.0 2766 3383 6145 DOHH2_400M_050219_2,6151 DOHH2_400M_050219_2,6151,KYFDEHYEY True True KYFDEHYEY 32.706123 647.274768054485 1790799936.0 6145.0 ENSG00000123975|ENST00000314355|CKS2 9.044041792551676 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6152 32.708 101.0 582510.0 25 0 65983.0 + 696 AENKVDVYGY 10 84 579.2773439349439 1156.5401349366878 2 579.2772094607353 MULTI CID FTMS 0 0 0 6145 457887.3125 1.0 0 0.0 7 Unmodified _AENKVDVYGY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 31.26834338654808 0.266153677697784 2 {[CP]|[EA]}[NS]V[RV]YGY 10 2 + 33.038 0.0 0.0 2.8566 2.8566 81.333 0.0 0.0 0.0 19.32619224753444 15.026975159433531 15.026975159433531 31.062287920263923 0 0.3494850021680094 0.0 0.0 0.2887254899964357 {[CP]|[EA]}[NS]V[RV]YGY;{[QN]|[E{I|L}]|[KN]}V[HT][HK]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 2.8566;0.17079 -;- 161 + 1 1.85 55135.5 1.0 2767 3383 6145 DOHH2_400M_050219_2,6152 DOHH2_400M_050219_2,6152,AENKVDVYGY False True AENKVDVYGY 32.708298 579.277209460735 2707660.5 6145.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 6.140345096588135 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6153 32.711 123.0 505060.0 25 0 76730.0 + 8535 ETERRMDFY 9 79 623.7800826864988 0 623.7802612185478 PEAK CID FTMS 0 0 0 6145 247044.953125 1.0 0 0.0 8 Unmodified _ETERRMDFY_ ENSG00000180354|ENST00000324453|MTURN;nc|ENSG00000180354|Q8N3F0-2|MTURN;nc|ENSG00000180354|Q8N3F0-4|MTURN 24.020572477871973 0.1646235280836931 2 {M(Oxidation (M))|F} 1 8 9.6041 0.0 0.0 0.77108 0.0 0.0 917.4018574122568 178.05115686588127 1095.4530142781382 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.77108 + + 17 + 1 1.85 50467.2 1.0 2768 3383 6145 DOHH2_400M_050219_2,6153 DOHH2_400M_050219_2,6153,ETERRMDFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6154 32.714 184.0 882640.0 25 0 169090.0 + 18451 KYFDEHYEY 9 114 431.85241170784207 1292.5354057237262 3 432.1863586306572 MULTI CID FTMS 0 0 0 6145 231333.375 0.0113182767173337 -2 0.1804580688476562 9 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 36.12702656103203 0.0967173616627612 2 {[YC]|[HE]}D{M(Oxidation (M))|F}YK[HQ][CS] 10 7 + 39.754 0.0 0.0 3.0757 3.0757 78.553 0.0 0.0 0.0 8.819459175083608 15.241502060549692 8.819459175083608 10.762451587267725 0 0.0 0.0 1.2614393726401687 0.3494850021680094 {[YC]|[HE]}D{M(Oxidation (M))|F}YK[HQ][CS];{[YC]|[HE]}YAYR[HQ][CS];[YK]{M(Oxidation (M))|F}DEH[HQ][CS];[YE]HAYR[HQ][CS];{[WN]|[YH]}EAYR[HQ][CS];{[YC]|[HE]}Y{[{M(Oxidation (M))|F}D]|MM}K[HQ][CS];{[YC]|[HE]}YAY[VG][HQ][CS];[YE]H{[{M(Oxidation (M))|F}D]|MM}K[HQ][CS];{[WN]|[YH]}E{[{M(Oxidation (M))|F}D]|MM}K[HQ][CS];{[WN]|[YH]}EAY[VG][HQ][CS] 3.0757;2.243;2.0142;1.7738;1.6376;1.58;1.2636;1.1108;0.97453;0.92853 -;-;-;-;-;-;-;-;-;- 640 1 1.85 134027.5 1.0 2769 3383 6145 DOHH2_400M_050219_2,6154 DOHH2_400M_050219_2,6154,KYFDEHYEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6155 32.719 256.0 299380.0 25 0 50291.0 + 5496 DLSPRVTAV 9 97 479.2715545975519 956.5285562619038 2 479.2709228396416 MULTI CID FTMS 0 0 0 6145 193866.265625 0.4883728335646596 -1 0.1110572814941406 10 Unmodified _DLSPRVTAV_ ENSG00000112159|ENST00000369393|MDN1 29.84058131909904 0.1515068451768857 2 {NN|[MP]|[D{I|L}]|[EV]}SPK[W{I|L}]V 8 4 + 42.14 0.0 0.0 4.4055 4.4055 79.091 0.0 0.0 0.0 10.498037644757048 4.69273760456403 4.69273760456403 8.393943874995173 0 1.242992819099939 2.0 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}SPK[W{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}RR{NN|[MP]|[D{I|L}]|[EV]}AV;{NN|[MP]|[D{I|L}]|[EV]}RRA{NN|[MP]|[D{I|L}]|[EV]}V;{[TV]|[{I|L}S]}DPK[W{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}RR[W{I|L}]V 4.4055;3.528;3.314;3.308;2.9586 -;-;-;-;- 94 1 1.85 63246.7 1.0 2770 3383 6145 DOHH2_400M_050219_2,6155 DOHH2_400M_050219_2,6155,DLSPRVTAV False True DLSPRVTAV 32.719148 479.270922839642 1751180.5 6145.0 ENSG00000112159|ENST00000369393|MDN1 4.256380558013916 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6156 32.723 174.0 340410.0 25 0 26723.0 + 15832 ISKINEVLT 9 103 508.8025304546584 1015.5905079761168 2 508.8018066287041 MULTI CID FTMS 0 0 0 6145 160213.0 1.0 0 0.0 11 Unmodified _ISKINEVLT_ ENSG00000095787|ENST00000354911|WAC;nc|ENSG00000095787|Q9BTA9-2|WAC;nc|ENSG00000095787|Q9BTA9-3|WAC;nc|ENSG00000095787|Q9BTA9-5|WAC 38.61474834105838 0.0830609365873449 2 {[TV]|[{I|L}S]}K{I|L}{[{M(Oxidation (M))|F}C]|[YS]}VPG 9 4 50.671 0.0 0.0 4.9893 0.0 0.0 0.0 68.05130945377186 68.05130945377186 24.80713133096572 0.0 0.0 0.0 0 1.0994850021680094 2.0 0.6109243748081782 0.0 {[TV]|[{I|L}S]}K{I|L}{[{M(Oxidation (M))|F}C]|[YS]}VPG 4.9893 - 635 + 1 1.85 50678.4 1.0 2771 3383 6145 DOHH2_400M_050219_2,6156 DOHH2_400M_050219_2,6156,ISKINEVLT True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6157 32.736 800.0 110480.0 25 0 8820.8 + 7086 EELQKIYKTY 10 117 438.9028263483711 1313.6866496453133 3 438.9029113650322 MULTI CID FTMS 0 0 0 6145 97649.8828125 1.0 0 0.0 12 Unmodified _EELQKIYKTY_ ENSG00000135317|ENST00000314673|SNX14;nc|ENSG00000135317|Q9Y5W7-2|SNX14;nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14 19.986897341741983 0.5121812865880797 2 EE[Q{I|L}]K{I|L}YKTY 10 0 + 45.217 0.0 0.0 3.442 3.442 81.854 0.0 0.0 0.0 34.24771730490184 14.146518864155126 14.146518864155126 21.816649761874103 0 0.0 1.0457574905606752 0.7134679910804405 0.0 + + EE[Q{I|L}]K{I|L}YKTY;EE[Q{I|L}]K{I|L}Y[TP]PP;[DP]VVY{I|L}K[Q{I|L}][HC];EE[Q{I|L}]K{I|L}[NG]PSS{I|L};[{I|L}A][EP]Y{I|L}K[Q{I|L}][HC];[PA]{[QN]|[E{I|L}]|[KN]}Y{I|L}K[Q{I|L}][HC] 3.442;1.7813;1.1991;0.73077;0.42588;0.34395 +;-;-;-;-;- + 155 + 1 1.85 79555.5 0.8899999856948853 2772 3383 6145 DOHH2_400M_050219_2,6157 DOHH2_400M_050219_2,6157,EELQKIYKTY False True EELQKIYKTY 32.73635 438.902911365032 460214.53125 6145.0 nc|ENSG00000135317|Q9Y5W7-2|SNX14;;nc|ENSG00000135317|Q9Y5W7-4|SNX14;;nc|ENSG00000135317|Q9Y5W7-3|SNX14;;ENSG00000135317|ENST00000314673|SNX14 4.969987710316976 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6158 32.738 73.0 510150.0 25 0 31689.0 -1 ISQYRFSTCVL 11 77 687.3502226068117 1372.685892280423 2 687.3492309451103 MULTI CID FTMS 0 0 0 6145 390186.78125 1.0 0 0.0 13 Carbamidomethyl (C) _ISQYRFSTC(Carbamidomethyl (C))VL_ ENST00000594154.5_1_19:52536841-52536970:-|nuORF 7.608950283845883 0.8392484121837455 2 {[TV]|[{I|L}S]}[H{I|L}]EYT{[QG]|[NA]}NV{I|L} 12 -1 + 49.508 0.0 0.0 3.6067 3.6067 70.835 0.0 0.0 0.0 9.788107009300616 15.48455006504028 9.788107009300616 3.0102999566398125 0 0.0 1.5228787452803376 0.2887254899964357 0.0 {[TV]|[{I|L}S]}[H{I|L}]EYT{[QG]|[NA]}NV{I|L};{[TV]|[{I|L}S]}[H{I|L}]EYQ{[SA]|[TG]}NV{I|L};[KG][HK]EYT{[QG]|[NA]}NV{I|L};[KG][HK]EYQ{[SA]|[TG]}NV{I|L};[QP][KP]EYT{[QG]|[NA]}NV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}Q[C(Carbamidomethyl (C))R]R{[QG]|[NA]}NV{I|L};[QP]S[{M(Oxidation (M))|F}V]ER{[QG]|[NA]}NV{I|L};[QP][KP]EYQ{[SA]|[TG]}NV{I|L} 3.6067;3.3874;2.8936;2.6743;2.6037;2.5296;2.3934;2.3844 -;-;-;-;-;-;-;- 410 1 1.85 33673.1 1.0 2773 3383 6145 DOHH2_400M_050219_2,6158 DOHH2_400M_050219_2,6158,ISQYRFSTCVL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6159 32.75 696.0 888110.0 25 0 92862.0 -1 0 122 846.8090144819522 4229.008690076761 5 847.2100097537041 MULTI CID FTMS 0 0 0 6145 369974.5 0.9705876107921368 -2 0.1804580688476562 14 2 DV[PS]GGYSPPQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 13 -1 61.852 0.0 0.0 1.4626 0.0 0.0 2832.350683340236 0.0 2832.350683340236 0.0 36.106569623232296 0.0 0.0 0 1.0 0.0 1.805462187404089 0.4916440611282626 DV[PS]GGYSPPQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 1.4626 - 5822 + 1 1.85 420308.6 1.0 2774 3383 6145 DOHH2_400M_050219_2,6159 DOHH2_400M_050219_2,6159, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6160 32.754 186.0 551360.0 25 0 84531.0 + 7117 EEMKSGLKDF 10 132 395.19359354361904 1182.558951231057 3 395.1932250857353 MULTI CID FTMS 0 0 0 6145 315023.71875 0.9737821177799324 -1 0.1110572814941406 15 Unmodified _EEMKSGLKDF_ chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000187627|P0DJD0|RGPD1 20.580933911654288 0.5022139299129796 2 EEMKSG{I|L}KD{M(Oxidation (M))|F} 10 0 + 57.278 0.0 0.0 4.8436 4.8436 86.405 0.0 0.0 0.0 48.08336279201199 12.64136888583522 12.64136888583522 19.570614607906933 0 0.0 0.9208187539523752 0.0 0.4247425010840047 + + EEMKSG{I|L}KD{M(Oxidation (M))|F};[DP][VP]{I|L}GSKM[HC];EEMKSG{I|L}{M(Oxidation (M))|F}[VG]S;EEMKS{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KT]S 4.8436;3.1886;3.102;1.8513 +;-;-;- + 203 + 1 1.85 84654.4 1.0 2775 3383 6145 DOHH2_400M_050219_2,6160 DOHH2_400M_050219_2,6160,EEMKSGLKDF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6161 32.758 166.0 594750.0 25 0 38660.0 + 32806 SEFFRSGKY 9 114 560.7746422161495 1119.5347314990988 2 560.7744628787041 MULTI CID FTMS 0 0 0 6145 220489.703125 0.465064179019577 -1 0.1110572814941406 16 Unmodified _SEFFRSGKY_ ENSG00000074800|ENST00000234590|ENO1;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;nc|ENSG00000074800|P06733-2|ENO1 30.7034409873982 0.1405282614900322 2 SE{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4 5 56.67 0.0 0.0 5.0619 0.0 0.0 0.0 606.2993757319051 606.2993757319051 23.879074645171727 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + SE{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5.0619 + + 329 + 1 1.85 77884.2 1.0 2776 3383 6145 DOHH2_400M_050219_2,6161 DOHH2_400M_050219_2,6161,SEFFRSGKY False True SEFFRSGKY 32.758185 560.774462878704 2705571.0 6145.0 ENST00000464920.1_1_1:8921421-8930582:-|nuORF;;ENSG00000074800|ENST00000234590|ENO1;;nc|ENSG00000074800|P06733-2|ENO1 2.889672646919886 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6162 32.765 383.0 272570.0 25 0 24901.0 + 8542 ETFYSTERY 9 114 598.267314109112 1194.520075285024 2 598.2670776247978 MULTI CID FTMS 0 0 0 6145 152874.1875 1.0 0 0.0 17 Unmodified _ETFYSTERY_ ENSG00000174010|ENST00000328046|KLHL15 57.72198328787511 0.0273433238377839 2 {[ET]|[MV]}{M(Oxidation (M))|F}YSTERY 9 0 + 51.424 0.0 0.0 4.305 4.305 82.375 0.0 0.0 0.0 18.67799510933964 11.268732363854994 11.268732363854994 11.440935587374526 0 0.6549471895720984 0.0 0.7742275032520141 0.0 + + {[ET]|[MV]}{M(Oxidation (M))|F}YSTERY;{[ET]|[MV]}{M(Oxidation (M))|F}YST[YT][PS];[YT][R{M(Oxidation (M))|F}]SY{M(Oxidation (M))|F}[DP];{[ET]|[MV]}Y{M(Oxidation (M))|F}STERY;{[TV]|[{I|L}S]}HETSY{M(Oxidation (M))|F}[DP];{[ET]|[MV]}[HV]TSY{M(Oxidation (M))|F}[DP];{[{M(Oxidation (M))|F}C]|[YS]}[Q{I|L}]YY{M(Oxidation (M))|F}[DP];{[TV]|[{I|L}S]}[YQ]YY{M(Oxidation (M))|F}[DP];{[ET]|[MV]}{M(Oxidation (M))|F}YST{[ET]|[MV]}{[MS]|[{M(Oxidation (M))|F}A]};[DP]{M(Oxidation (M))|F}[PG][C(Carbamidomethyl (C))K]Y[DP] 4.305;3.3472;3.3011;3.2943;3.2821;3.0499;2.9499;2.6979;2.6291;2.4042 +;-;-;-;-;-;-;-;-;- + 416 + 1 1.85 82692.4 1.0 2777 3383 6145 DOHH2_400M_050219_2,6162 DOHH2_400M_050219_2,6162,ETFYSTERY True True ETFYSTERY 32.765075 598.267077624798 1387972.625 6145.0 ENSG00000174010|ENST00000328046|KLHL15 8.3396315574646 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6163 32.77 258.0 253550.0 25 0 19903.0 -1 0 107 543.301419468232 542.2941430016319 1 543.3003417849541 MULTI CID FTMS 0 0 0 6145 146313.578125 0.0315790823696186 16 -1.363037109375 18 2 Y 1 -1 13.495 0.0 0.0 2.4885 0.0 0.0 361.2194797709663 0.0 361.2194797709663 0.0 3.661968799114845 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.4885 - 18 + 1 1.85 54826.0 1.0 2778 3383 6145 DOHH2_400M_050219_2,6163 DOHH2_400M_050219_2,6163, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6164 32.777 410.0 311870.0 25 0 24587.0 + 43332 WLSLLSSWD 9 143 553.7774239475154 0 553.7779418826103 PEAK CID FTMS 0 0 0 6145 111602.8359375 0.4023066198777812 -2 0.1804580688476562 19 Unmodified _WLSLLSSWD_ nc|ENSG00000160087|Q8N2K1-3|UBE2J2 42.09456458481378 0.053291022336892 2 DS{I|L}GSGKE 8 6 58.446 0.0 0.0 5.2866 0.0 0.0 204.09079826275348 125.07239710025624 329.1631953630097 0.0 0.0 0.0 0.0 0 2.048455006504028 0.0 1.5356668758921828 0.4247425010840047 DS{I|L}GSGKE 5.2866 - 843 + 1 1.85 102963.6 1.0 2779 3383 6145 DOHH2_400M_050219_2,6164 DOHH2_400M_050219_2,6164,WLSLLSSWD True False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6165 32.781 214.0 212530.0 25 0 11910.0 + 798 AESNSISKW 9 86 511.2507106773515 1020.486868421503 2 511.2518188357353 MULTI CID FTMS 0 0 0 6145 89129.671875 0.7279091968114042 -1 0.1110572814941406 20 Unmodified _AESNSISKW_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 20.41453444215458 0.284085796332423 2 {[CP]|[EA]}SN{[TV]|[{I|L}S]}SKW 9 0 + 34.67 0.0 0.0 3.3974 3.3974 69.788 0.0 0.0 0.0 23.41133473038273 12.252684618815096 12.252684618815096 2.7557626122369108 0 0.4247425010840047 0.0 0.0 0.0 + + {[CP]|[EA]}SN{[TV]|[{I|L}S]}SKW;{[ES]|[DT]|[{I|L}C]}AN{[TV]|[{I|L}S]}SKW;{[CP]|[EA]}SGG{[TV]|[{I|L}S]}SKW;{[ES]|[DT]|[{I|L}C]}A[WQ]SKW;{[ES]|[DT]|[{I|L}C]}AGG{[TV]|[{I|L}S]}SKW;{[CP]|[EA]}SN{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))K]{I|L};{[ES]|[DT]|[{I|L}C]}AN{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))K]{I|L};{[CP]|[EA]}SN{[TV]|[{I|L}S]}[KC]G{I|L};{[ES]|[DT]|[{I|L}C]}AN{[TV]|[{I|L}S]}[KC]G{I|L};{[CP]|[EA]}S[DV]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}[PG] 3.3974;3.1274;2.4951;2.4926;2.2251;1.3875;1.1174;0.90444;0.6344;0.55073 +;-;-;-;-;-;-;-;-;- + 252 + 1 1.85 39999.7 1.0 2780 3383 6145 DOHH2_400M_050219_2,6165 DOHH2_400M_050219_2,6165,AESNSISKW False True AESNSISKW 32.781285 511.251818835735 1485162.125 6145.0 nc|ENSG00000163939|Q86U86-7|PBRM1;;ENSG00000163939|ENST00000707071|PBRM1;;nc|ENSG00000163939|Q86U86-8|PBRM1;;nc|ENSG00000163939|Q86U86-4|PBRM1;;nc|ENSG00000163939|Q86U86-5|PBRM1;;nc|ENSG00000163939|Q86U86|PBRM1;;nc|ENSG00000163939|Q86U86-2|PBRM1;;nc|ENSG00000163939|Q86U86-3|PBRM1;;nc|ENSG00000163939|Q86U86-9|PBRM1 5.131768067677816 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6167 32.786 36.0 1344900.0 25 0 78179.0 + 7390 EGGIVSKNF 9 76 475.75090341042494 949.48725388765 2 475.7507812380791 MULTI CID FTMS 0 0 0 6166 1179066.125 0.3985219770516267 1 -0.0788459777832031 1 Unmodified _EGGIVSKNF_ ENSG00000152137|ENST00000281938|HSPB8 41.8396318013385 0.0653578398400075 2 {[DA]|[EG]}G{I|L} 4 5 25.635 0.0 0.0 2.6999 0.0 0.0 0.0 590.2942051418092 590.2942051418092 3.2390874094431865 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.0 + {[DA]|[EG]}G{I|L} 2.6999 + + 117 1 1.85 45794.9 1.0 2781 3384 6166 DOHH2_400M_050219_2,6167 DOHH2_400M_050219_2,6167,EGGIVSKNF True True EGGIVSKNF 32.785846 475.750781238079 35693860.0 6166.0 ENSG00000152137|ENST00000281938|HSPB8 6.85291051864624 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6168 32.789 159.0 363220.0 25 0 29023.0 + 2524 ASDKETYELRY 11 86 458.88940851005054 1373.6463961303516 3 458.8892700076103 MULTI CID FTMS 0 0 0 6166 336046.78125 0.3535663938262855 1 -0.0788459777832031 2 Unmodified _ASDKETYELRY_ ENSG00000163584|ENST00000295830|RPL22L1 93.44831873261192 0.0005410706345729 2 ASDKETYE{I|L}RY 11 0 + 112.55 0.0 0.0 8.1933 8.1933 94.858 0.0 0.0 0.0 95.40637833022332 11.1798669615398 11.1798669615398 13.214562785677655 0 1.6936726795685342 1.3010299956639813 1.5356668758921828 0.7302046884880937 + + ASDKETYE{I|L}RY;ASDKETYEY[R{I|L}];ASDKETYYE[R{I|L}];{[WS]|[C(Carbamidomethyl (C)){I|L}]}KET{[{M(Oxidation (M))|F}H]|[RQ]}KSQP;{[WS]|[C(Carbamidomethyl (C)){I|L}]}KET{[{M(Oxidation (M))|F}H]|[RQ]}KS[AG]P;{[QD]|[EN]|[WG]|[KD]|[RS]}SK{[{M(Oxidation (M))|F}H]|[RQ]}TM[Y{M(Oxidation (M))|F}]A;[R{I|L}]Y{M(Oxidation (M))|F}YTM[Y{M(Oxidation (M))|F}]A;{[WS]|[C(Carbamidomethyl (C)){I|L}]}KET{[{M(Oxidation (M))|F}H]|[RQ]}[NG][R{I|L}];{[WS]|[C(Carbamidomethyl (C)){I|L}]}KE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}EQP;{[WS]|[C(Carbamidomethyl (C)){I|L}]}K[{M(Oxidation (M))|F}T][HK]SEQP 8.1933;7.2313;6.7224;3.9476;3.2831;3.045;2.9835;2.5546;1.921;1.0629 +;-;-;-;-;-;-;-;-;- + 749 + 1 1.85 52529.8 1.0 2782 3384 6166 DOHH2_400M_050219_2,6168 DOHH2_400M_050219_2,6168,ASDKETYELRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6169 32.791 77.0 760590.0 25 0 85752.0 + + -1 TEIDARAGTF 10 73 539.7636034168122 1077.5126539004243 2 540.7697631716728 MULTI CID FTMS 0 0 0 6166 560941.1875 0.6598846169003464 -1 0.0916786193847656 3 Oxidation (M) _LDM(Oxidation (M))KFPQSP_ nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1 15.847184025352805 0.4077185912009129 2 VE{I|L}DA 5 -1 38.826 0.0 0.0 3.6033 0.0 0.0 0.0 547.2651461236936 547.2651461236936 26.35151878060192 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 VE{I|L}DA 3.6033 - 81 + 1 1.85 51956.9 1.0 2783 3384 6166 DOHH2_400M_050219_2,6169 DOHH2_400M_050219_2,6169,LDMKFPQSP False False TEIDARAGTF 32.790771 540.769763171673 4623040.0 6166.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 6.06051762898763 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6170 32.794 155.0 400160.0 25 0 33844.0 + 45366 YSSPYPQEY 9 98 567.2429106192931 1132.471268305386 2 567.2432739138603 MULTI CID FTMS 0 0 0 6166 337814.4375 0.5433149176935393 -1 0.0916786193847656 4 Unmodified _YSSPYPQEY_ ENSG00000083168|ENST00000265713|KAT6A;ENSG00000156650|ENST00000287239|KAT6B;ENST00000490365.1_1_10:76737066-76741701:+|nuORF;nc|ENSG00000156650|Q8WYB5-2|KAT6B;nc|ENSG00000156650|Q8WYB5-3|KAT6B 52.268347100219714 0.0353964759249114 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SST 5 7 39.201 0.0 0.0 3.4615 0.0 0.0 0.0 594.2201280158035 594.2201280158035 9.341561490170529 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 1.1549471895720984 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SST 3.4615 - 575 1 1.85 51444.3 1.0 2784 3384 6166 DOHH2_400M_050219_2,6170 DOHH2_400M_050219_2,6170,YSSPYPQEY True True YSSPYPQEY 32.793854 567.24327391386 4963402.5 6166.0 ENSG00000156650|ENST00000287239|KAT6B;;nc|ENSG00000156650|Q8WYB5-2|KAT6B;;ENSG00000083168|ENST00000265713|KAT6A;;nc|ENSG00000156650|Q8WYB5-3|KAT6B;;ENST00000490365.1_1_10:76737066-76741701:+|nuORF 7.894833405812581 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6171 32.797 151.0 2321900.0 25 0 299630.0 8820 EYHWSVYE 8 156 556.737919737307 1111.461286541414 2 556.7366821169853 MULTI CID FTMS 0 0 0 6166 341622.53125 0.2435933939632432 -1 0.0916786193847656 5 Unmodified _EYHWSVYE_ ENSG00000170381|ENST00000643230|SEMA3E;nc|ENSG00000170381|O15041-2|SEMA3E 34.10243960390752 0.3329570729325616 2 EYRYA[{M(Oxidation (M))|F}T]Y 8 6 + 68.493 0.0 0.0 6.1624 6.1624 83.356 0.0 0.0 0.0 29.31778911390245 0.4846991530881865 0.4846991530881865 5.779550148593472 0 0.9163865622122672 1.0457574905606752 1.2491348669726234 0.3807196863200844 EYRYA[{M(Oxidation (M))|F}T]Y;EYK{M(Oxidation (M))|F}D[{M(Oxidation (M))|F}T]Y;EYKYA{M(Oxidation (M))|F}EY;EY[VG]YA[{M(Oxidation (M))|F}T]Y;EYHKP{M(Oxidation (M))|F}EY;EYH{M(Oxidation (M))|F}D[HK]H;EYK{M(Oxidation (M))|F}S{M(Oxidation (M))|F}EY;EYKHP{M(Oxidation (M))|F}EY;EYHDV{[WT]|[RM]}Y;EYH{M(Oxidation (M))|F}DR[{M(Oxidation (M))|F}V] 6.1624;5.6424;4.9946;4.9866;4.9304;4.5488;4.4069;4.3658;4.184;3.8564 -;-;-;-;-;-;-;-;-;- 2796 + 1 1.85 258825.4 1.0 2785 3384 6166 DOHH2_400M_050219_2,6171 DOHH2_400M_050219_2,6171,EYHWSVYE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6172 32.803 319.0 358690.0 25 0 31037.0 + + 33397 AERDVYTGDAL 11 123 605.2910275431635 604.2837510765635 1 605.2910644412041 MULTI CID FTMS 0 0 0 6166 284739.4375 0.328174383756984 -1 0.0916786193847656 6 Unmodified _SGSGGGAL_ ENSG00000008018|ENST00000262193|PSMB1 2.889219685676258 0.8067950007271085 2 {[DA]|[EG]}SA{[QN]|[E{I|L}]|[KN]} 6 -1 + 26.144 0.0 0.0 4.3264 4.3264 75.135 0.0 0.0 0.0 5.174837133936308 -3.5095628692308622 -3.5095628692308622 4.771212547196619 0 0.0 1.3010299956639813 0.0 0.0 {[DA]|[EG]}SA{[QN]|[E{I|L}]|[KN]};{[DA]|[EG]}GT{[QN]|[E{I|L}]|[KN]};{M(Oxidation (M))|F}YY{I|L};{M(Oxidation (M))|F}{I|L}YY;{[SA]|[TG]}DA{[QN]|[E{I|L}]|[KN]};{[ET]|[MV]}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}T{[QN]|[E{I|L}]|[KN]};[DG]TA{[QN]|[E{I|L}]|[KN]};{[ES]|[DT]|[{I|L}C]}GA{[QN]|[E{I|L}]|[KN]};[DG]AT{[QN]|[E{I|L}]|[KN]} 4.3264;3.5369;3.1787;3.0476;1.8063;1.7102;1.1478;1.0167;0.8857;0.22717 -;-;-;-;-;-;-;-;-;- 147 1 1.85 84195.3 1.0 2786 3384 6166 DOHH2_400M_050219_2,6172 DOHH2_400M_050219_2,6172,SGSGGGAL False False AERDVYTGDAL 32.802689 605.291064441204 5167886.5 6166.0 ENSG00000008018|ENST00000262193|PSMB1 7.766025384267171 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6173 32.808 317.0 349600.0 25 0 33315.0 + 16692 KEQQQQQMW 9 127 617.2878719009287 1232.5611908686574 2 617.2885009646416 MULTI CID FTMS 0 0 0 6166 246526.703125 0.2669690939587458 -1 0.0916786193847656 7 Unmodified _KEQQQQQMW_ ENSG00000145088|ENST00000273668|EAF2 92.65332237495696 0.0139087009896299 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QQQQQMW 9 0 + 79.563 0.0 0.0 6.4551 6.4551 85.572 0.0 0.0 0.0 2.243012119929091 30.02844862390932 2.243012119929091 6.696312882790636 0 0.9247425010840048 0.0 1.298455006504028 2.1747425010840047 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QQQQQMW;[AG]S{[VA]|[{I|L}G]}QQQQMW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]QQQQMW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QQ[AG]QQMW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QQQQ[AG]MW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q[AG]QQQMW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QQQ[AG]QMW;[AG]S{[VA]|[{I|L}G]}QQQ[AG]MW;[AG]S{[VA]|[{I|L}G]}Q[AG]QQMW;[AG]S{[VA]|[{I|L}G]}QQ[AG]QMW 6.4551;5.9118;5.708;5.708;5.708;5.708;5.708;5.1712;5.1712;5.1712 +;-;-;-;-;-;-;-;-;- + 2319 1 1.85 85745.9 1.0 2787 3384 6166 DOHH2_400M_050219_2,6173 DOHH2_400M_050219_2,6173,KEQQQQQMW True True KEQQQQQMW 32.808483 617.288500964642 6664403.0 6166.0 ENSG00000145088|ENST00000273668|EAF2 7.003749370574951 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6174 32.815 353.0 284610.0 25 0 24766.0 + 7118 EEMKSGLKDF 10 127 592.2869126966996 1182.559272460199 2 592.2874633669853 MULTI CID FTMS 0 0 0 6166 210392.53125 1.0 0 0.0 8 Unmodified _EEMKSGLKDF_ chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000187627|P0DJD0|RGPD1 59.05245873256422 0.0390717477387156 2 EEMKS{[VA]|[{I|L}G]}KD{M(Oxidation (M))|F} 10 0 + 61.463 0.0 0.0 5.1974 5.1974 89.289 0.0 0.0 0.0 44.32258126592544 13.037275116073346 13.037275116073346 37.40031912114908 0 1.6307196863200843 1.6989700043360187 0.2302046884880938 0.0 + + EEMKS{[VA]|[{I|L}G]}KD{M(Oxidation (M))|F};[QP][YK]EEKD{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WQ][NS]KD{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[KG]MEEKD{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{[VA]|[{I|L}G]}SKHHD{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KD{M(Oxidation (M))|F};[DP]{[WT]|[RM]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KD{M(Oxidation (M))|F};{[MG]|[TS]}[KP]SKHHD{M(Oxidation (M))|F};[QP][YK]KEED{M(Oxidation (M))|F};[QP]{I|L}[PS][HD]KD{M(Oxidation (M))|F} 5.1974;2.0348;1.9961;1.8904;1.8056;1.7236;1.7173;1.5792;1.504;1.3813 +;-;-;-;-;-;-;-;-;- + 707 + 1 1.85 78972.4 1.0 2788 3384 6166 DOHH2_400M_050219_2,6174 DOHH2_400M_050219_2,6174,EEMKSGLKDF True True EEMKSGLKDF 32.814856 592.287463366985 3348042.25 6166.0 ENSG00000153201|ENST00000283195|RANBP2;;ENSG00000153165|ENST00000409886|RGPD3;;ENSG00000169629|ENST00000302558|RGPD8;;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;;ENSG00000015568|ENST00000016946|RGPD5;;ENSG00000185304|ENST00000398146|RGPD2;;ENSG00000187627|ENST00000641458|RGPD1;;ENSG00000183054|ENST00000329516|RGPD6;;ENSG00000196862|ENST00000408999|RGPD4;;nc|ENSG00000187627|P0DJD0|RGPD1 8.279005209604898 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6175 32.819 239.0 421580.0 25 0 23228.0 + 36850 TELPKAEKW 9 118 367.86981006901016 1100.5876008072305 3 367.8699218630791 MULTI CID FTMS 0 0 0 6166 190121.3125 0.0455590779406633 6 -0.5432319641113281 9 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 36.506200033944 0.094635877243972 2 {[ET]|[MV]}{I|L}PKAEKW 9 0 {[ET]|[MV]} + + 34.473 4.7185 2.0507 3.1323 3.1323 49.088 0.0 0.0 0.0 0.0 17.82274821495718 0.0 0.0 0 0.3252574989159953 0.0 0.3252574989159953 0.0 + + {[ET]|[MV]}{I|L}PKAEKW 3.1323 + + 317 + 1 1.85 87556.7 1.0 2789 3384 6166 DOHH2_400M_050219_2,6175 DOHH2_400M_050219_2,6175,TELPKAEKW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6176 32.823 181.0 295360.0 25 0 27828.0 + 6649 EAVPTLPGPL 10 99 497.2844734456675 992.554393958135 2 497.2827636599541 MULTI CID FTMS 0 0 0 6166 151486.296875 0.3432599402498065 2 -0.2445182800292968 10 Unmodified _EAVPTLPGPL_ REV__ENSG00000139116|ENST00000361418|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-2|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-3|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-4|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-5|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A 11.640296217721598 0.652229146672156 2 [{I|L}T][YT][TA]NP{I|L} 9 -1 [{I|L}T][YT][TA]N + + 13.979 -24.86 -3.2522 1.4084 1.4084 47.021 0.0 0.0 0.0 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 [{I|L}T][YT][TA]NP{I|L} 1.4084 - 88 + 1 1.85 45698.2 1.0 2790 3384 6166 DOHH2_400M_050219_2,6176 DOHH2_400M_050219_2,6176,EAVPTLPGPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6177 32.827 235.0 435850.0 25 0 52389.0 + 95 AAHVSRVIL 9 117 483.2983640079177 964.5821750826354 2 483.2984191775322 MULTI CID FTMS 0 0 0 6166 157581.59375 0.6122569504204204 -1 0.0916786193847656 11 Unmodified _AAHVSRVIL_ ENSG00000106628|ENST00000610533|POLD2 33.4449034751529 0.1114409586740657 2 AAHV 4 5 56.771 0.0 0.0 5.8856 0.0 0.0 0.0 583.3579614406973 583.3579614406973 18.393943874995173 0.0 0.0 0.0 0 1.2614393726401687 1.2218487496163564 0.0 0.0 + AAHV 5.8856 + + 246 + 1 1.85 84171.8 1.0 2791 3384 6166 DOHH2_400M_050219_2,6177 DOHH2_400M_050219_2,6177,AAHVSRVIL True True AAHVSRVIL 32.827212 483.298419177532 1400280.125 6166.0 ENSG00000106628|ENST00000610533|POLD2 2.67462956905365 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6178 32.841 800.0 196960.0 25 0 11408.0 + 42016 VQQWRNWMLQ 10 143 702.8477999517803 1403.6810469703605 2 703.3484985232353 MULTI CID FTMS 0 0 0 6166 146195.78125 0.727301431566219 -1 0.0916786193847656 12 Oxidation (M) _VQQWRNWM(Oxidation (M))LQ_ ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1 61.357469665136826 0.0330252915653943 2 {[QV]|[N{I|L}]|[RA]|[KV]}NEEN{I|L}NG{M(Oxidation (M))|F}{I|L}Q 12 6 + 115.7 0.0 0.0 8.2423 8.2423 86.436 0.0 0.0 0.0 28.44212497064703 99.64754753528376 28.44212497064703 3.979400086720375 0 2.6237125054200234 2.0 0.2614393726401688 1.7104093769761874 {[QV]|[N{I|L}]|[RA]|[KV]}NEEN{I|L}NG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEQD{I|L}NG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}GGEEN{I|L}NG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEN{I|L}GGG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEGG{I|L}NG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEQARDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[AG]D{I|L}NG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEQD{I|L}GGG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}GGEQD{I|L}NG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEN{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q 8.2423;7.9588;7.5941;7.5941;7.5941;7.3727;7.3106;7.3106;7.3106;7.1435 -;-;-;-;-;-;-;-;-;- 11292 1 1.85 113085.3 0.7400000095367432 2792 3384 6166 DOHH2_400M_050219_2,6178 DOHH2_400M_050219_2,6178,VQQWRNWMLQ True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6179 32.845 232.0 297150.0 25 0 29421.0 + 29955 QSPTLQESY 9 115 526.7479717117495 1051.481390490299 2 526.7485229372978 MULTI CID FTMS 0 0 0 6166 179783.625 0.1984966484078384 9 -0.6516151428222656 13 Unmodified _QSPTLQESY_ REV__ENSG00000164463|ENST00000296953|CREBRF;REV__ENST00000520464.1_1_5:172507634-172535847:+|nuORF;REV__nc|ENSG00000164463|Q8IUR6-3|CREBRF 14.838274106304384 0.4350285940865338 2 {[SA]|[TG]}PQCW{I|L}T{M(Oxidation (M))|F} 9 -1 + 25.199 0.0 0.0 2.3965 2.3965 71.2 0.0 0.0 0.0 0.977304426071516 -0.8111574582482426 -0.8111574582482426 5.6246936830415 0 0.2231975075880329 0.431798275933005 0.8921590589602533 0.2614393726401688 {[SA]|[TG]}PQCW{I|L}T{M(Oxidation (M))|F};{[SA]|[TG]}QPCW{I|L}T{M(Oxidation (M))|F};{[QS]|[NT]}APCW{I|L}T{M(Oxidation (M))|F};{[SA]|[TG]}GAPCW{I|L}T{M(Oxidation (M))|F};[PA]SQCW{I|L}T{M(Oxidation (M))|F};{[SA]|[TG]}PQ{I|L}{[C(Carbamidomethyl (C))E]|[WC]}T{M(Oxidation (M))|F};[PS]AQCW{I|L}T{M(Oxidation (M))|F};EEQA{[QS]|[NT]}{I|L}T{M(Oxidation (M))|F};[AG]SAPCW{I|L}T{M(Oxidation (M))|F};{[SA]|[TG]}P[AG]CW{I|L}T{M(Oxidation (M))|F} 2.3965;1.8616;1.7603;1.6616;1.5476;1.5334;1.4368;1.3081;1.3078;1.2721 -;-;-;-;-;-;-;-;-;- 621 1 1.85 57366.4 1.0 2793 3384 6166 DOHH2_400M_050219_2,6179 DOHH2_400M_050219_2,6179,QSPTLQESY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6180 32.86 800.0 91817.0 25 0 4707.5 -1 SQRAFCTMHFY 11 101 732.3125129724451 1462.61047301169 2 732.8134033083916 MULTI CID FTMS 0 0 0 6166 94066.90625 1.0 0 0.0 14 Carbamidomethyl (C),Oxidation (M) _SQRAFC(Carbamidomethyl (C))TM(Oxidation (M))HFY_ ENST00000277415.15_1_9:137989658-137989826:+|nuORF 5.731851221503515 0.8481046878870278 2 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 53.906 0.0 0.0 3.6856 0.0 0.0 378.1667347638688 0.0 378.1667347638688 0.0 38.92665812765075 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.4247425010840047 DEAQQNA{M(Oxidation (M))|F}Y 3.6856 - 382 1 1.85 56665.5 0.6399999856948853 2794 3384 6166 DOHH2_400M_050219_2,6180 DOHH2_400M_050219_2,6180,SQRAFCTMHFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6182 32.865 57.0 1084200.0 25 0 137490.0 + 44004 YIDQGRNPQLY 11 64 683.8415675598922 1365.6685821865842 2 683.8413574099541 MULTI CID FTMS 0 0 0 6181 1157904.0 0.8614616824223811 1 -0.1656723022460937 1 Unmodified _YIDQGRNPQLY_ ENSG00000133398|ENST00000255764|MED10;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 53.40400417844725 0.0987786977674846 2 [Y{I|L}]DKN{[ET]|[MV]}[HA]{I|L}Y 11 6 + 66.673 0.0 0.0 4.8821 4.8821 87.509 0.0 0.0 0.0 36.22296361110688 8.85592936331011 8.85592936331011 27.26336081802205 0 1.75 2.0 0.5 0.3494850021680094 [Y{I|L}]DKN{[ET]|[MV]}[HA]{I|L}Y;[Y{I|L}]DK[{M(Oxidation (M))|F}E]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RH];[Y{I|L}]DK[{M(Oxidation (M))|F}T]{[WT]|[RM]}[RH];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L}[{M(Oxidation (M))|F}E][QP]{I|L}Y;[QP]{I|L}YYM{I|L}Y{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}[HV][KG]M{I|L}Y{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}[HV][C(Carbamidomethyl (C))R]{I|L}Y{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}[HV]{I|L}[C(Carbamidomethyl (C))R]Y{I|L}Y 4.8821;2.8858;2.6653;2.2441;1.9293;0.91785;0.8772;0.65677 -;-;-;-;-;-;-;- 248 + 1 1.841 50982.4 1.0 2795 3385 6181 DOHH2_400M_050219_2,6182 DOHH2_400M_050219_2,6182,YIDQGRNPQLY True True YIDQGRNPQLY 32.864745 683.841357409954 31349358.0 6181.0 ENSG00000133398|ENST00000255764|MED10;;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 7.800397078196208 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6183 32.867 92.0 372650.0 25 0 38596.0 + 7246 EESGARINI 9 70 494.7571530092324 987.4997530852648 2 494.7566100955009 MULTI CID FTMS 0 0 0 6181 391587.375 0.3847323344928607 2 -0.2893257141113281 2 Unmodified _EESGARINI_ ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000498121.1_1_21:47289198-47321357:+|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 37.97399986684836 0.0865783450051559 2 EESGA[R{I|L}]N{I|L} 9 0 + 46.563 0.0 0.0 4.7152 4.7152 75.347 0.0 0.0 0.0 29.740218207710555 5.607186923272195 5.607186923272195 3.4678748622465605 0 0.3252574989159953 2.0 0.0 0.2887254899964357 + + EESGA[R{I|L}]N{I|L};EESQ[R{I|L}]N{I|L};EESGA[R{I|L}]GG{I|L};EESQ[R{I|L}]GG{I|L} 4.7152;4.364;3.4904;3.1337 +;-;-;- + 60 + 1 1.841 33912.4 1.0 2796 3385 6181 DOHH2_400M_050219_2,6183 DOHH2_400M_050219_2,6183,EESGARINI True True EESGARINI 32.866754 494.756610095501 11445467.0 6181.0 nc|ENSG00000183570|P57721-5|PCBP3;;ENSG00000183570|ENST00000681687|PCBP3;;nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;ENST00000498121.1_1_21:47289198-47321357:+|nuORF;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000183570|P57721-3|PCBP3;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;nc|ENSG00000183570|P57721-2|PCBP3;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000197111|Q15366-7|PCBP2;;nc|ENSG00000183570|P57721-4|PCBP3;;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 7.630818208058675 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6184 32.869 131.0 673690.0 25 0 57611.0 + 25194 MTERQDLVY 9 100 577.7789726485371 1153.543392363874 2 577.7792846560478 MULTI CID FTMS 0 0 0 6181 682866.6875 1.0 0 0.0 3 Unmodified _MTERQDLVY_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 19.361941925380144 0.3125782356748823 2 TM{I|L}VY 5 5 44.464 0.0 0.0 3.8546 0.0 0.0 528.2311878888687 0.0 528.2311878888687 0.0 37.47425010840047 0.0 0.0 0 1.0 0.0 0.0 0.0 TM{I|L}VY 3.8546 - 134 1 1.841 73647.7 1.0 2797 3385 6181 DOHH2_400M_050219_2,6184 DOHH2_400M_050219_2,6184,MTERQDLVY False True MTERQDLVY 32.869439 577.779284656048 4515565.5 6181.0 nc|ENSG00000104517|O95071-2|UBR5;;ENSG00000104517|ENST00000520539|UBR5 2.467655142148336 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6185 32.871 90.0 660240.0 25 0 52787.0 + 13363 HLGTPGPVSL 10 98 489.2738723428612 976.5331917525224 2 489.2745544314384 MULTI CID FTMS 0 0 0 6181 617331.1875 0.7716430053307926 1 -0.1656723022460937 4 Unmodified _HLGTPGPVSL_ REV__ENSG00000122515|ENST00000309315|ZMIZ2;REV__nc|ENSG00000122515|Q8NF64-2|ZMIZ2;REV__nc|ENSG00000122515|Q8NF64-3|ZMIZ2 36.12702656103203 0.1984647928738587 2 [VP]HTQPV{[TV]|[{I|L}S]} 9 -1 + 43.541 0.0 0.0 4.4587 4.4587 81.393 0.0 0.0 0.0 3.0331834565556903 19.89577516576788 3.0331834565556903 9.208187539523747 0 0.3252574989159953 1.6989700043360187 0.4247425010840047 0.0 [VP]HTQPV{[TV]|[{I|L}S]};[VP]HT[AG]PV{[TV]|[{I|L}S]};[HT]QPVPV{[TV]|[{I|L}S]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VTQPV{[TV]|[{I|L}S]};[VP]HR[Q{I|L}]D{I|L};{[MS]|[{M(Oxidation (M))|F}A]}V{[MG]|[TS]}G[VP]S{I|L};[HT][AG]PVPV{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}[RN][RN]S{I|L};[VP]HVG[Q{I|L}]D{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]VPV{[TV]|[{I|L}S]} 4.4587;3.5158;2.9547;2.5386;2.435;2.2148;2.0117;1.9909;1.8124;1.779 -;-;-;-;-;-;-;-;-;- 307 1 1.841 49398.2 1.0 2798 3385 6181 DOHH2_400M_050219_2,6185 DOHH2_400M_050219_2,6185,HLGTPGPVSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6186 32.874 121.0 1127200.0 25 0 276860.0 + 8738 EVNPNEWEMQ 10 111 425.8490802984719 1274.5254114956158 3 425.8487426638603 MULTI CID FTMS 0 0 0 6181 393200.28125 1.0 0 0.0 5 Unmodified _EVNPNEWEMQ_ REV__ENSG00000151136|ENST00000280758|ABTB3;REV__nc|ENSG00000151136|A6QL63-2|ABTB3;REV__nc|ENSG00000151136|A6QL63-3|ABTB3 8.444304893310646 0.6875766406947869 2 [YK]{M(Oxidation (M))|F}DEHYHH 9 -1 + 56.759 0.0 0.0 4.4533 4.4533 78.987 0.0 0.0 0.0 7.848265625289841 7.147642715192504 7.147642715192504 7.848265625289841 0 0.805462187404089 0.0 0.9698565171985376 0.9674165578762486 [YK]{M(Oxidation (M))|F}DEHYHH;[YE]YHEQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y;{[YC]|[HE]}D{M(Oxidation (M))|F}YKYHH;[YK]{M(Oxidation (M))|F}DE[DG]KHH;[YE]YHEQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L};{[YC]|[HE]}D{M(Oxidation (M))|F}YYKHH;[YE]YHE[AG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y;[YE]YKYC{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y;[YE]KYYC{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y;{[YC]|[HE]}YAYRYHH 4.4533;3.8376;3.2359;3.1614;3.1011;2.6665;2.5612;2.4606;1.8911;1.8714 -;-;-;-;-;-;-;-;-;- 739 1 1.841 118382.2 1.0 2799 3385 6181 DOHH2_400M_050219_2,6186 DOHH2_400M_050219_2,6186,EVNPNEWEMQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6187 32.877 127.0 488310.0 25 0 63197.0 + 40397 VIDQQNGLY 9 106 525.2664138896658 1048.5182748461316 2 525.2671996951103 MULTI CID FTMS 0 0 0 6181 375105.15625 0.3207601991319669 -1 0.0788459777832031 6 Unmodified _VIDQQNGLY_ ENSG00000132383|ENST00000254719|RPA1 22.736283301280096 0.2418982879461534 2 {[QN]|[E{I|L}]|[KN]}E[NG]{I|L}V{I|L}Y 9 6 + 40.184 0.0 0.0 3.8325 3.8325 74.014 0.0 0.0 0.0 7.033348097384682 11.0827208845118 7.033348097384682 5.017346757967545 0 0.3935078169319297 0.958607314841775 0.7742275032520141 1.1861818737241734 {[QN]|[E{I|L}]|[KN]}E[NG]{I|L}V{I|L}Y;{[QN]|[E{I|L}]|[KN]}E[{I|L}V]NG{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}Q[NG]{I|L}V{I|L}Y;QQD[NG]{I|L}V{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}Q[{I|L}V]NG{I|L}Y;{[QN]|[E{I|L}]|[KN]}E[{I|L}V]GGG{I|L}Y;QQD[{I|L}V]NG{I|L}Y;{[CP]|[EA]}[NG][NG]{I|L}V{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}[AG][NG]{I|L}V{I|L}Y;{[VA]|[{I|L}G]}NV{[CP]|[EA]}NG{I|L}Y 3.8325;3.354;3.1617;2.9182;2.6832;2.4758;2.4397;2.2835;2.2835;2.2555 -;-;-;-;-;-;-;-;-;- 417 1 1.841 55264.2 1.0 2800 3385 6181 DOHH2_400M_050219_2,6187 DOHH2_400M_050219_2,6187,VIDQQNGLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6188 32.883 370.0 256570.0 25 0 15499.0 + 412 AEEEIMKKI 9 126 545.7940924266331 0 545.7948486208916 PEAK CID FTMS 0 0 0 6181 276873.5 1.0 0 0.0 7 Unmodified _AEEEIMKKI_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000454907.1_1_6:167115266-167115902:-|nuORF 49.55428908609986 0.0328875595922215 2 EE{I|L}MK 5 4 22.92 0.0 0.0 2.1035 0.0 0.0 200.0810736322228 256.16816126041255 456.2492348926353 0.0 0.0 0.0 0.0 0 1.274227503252014 0.0 0.3494850021680094 0.0 + EE{I|L}MK 2.1035 + + 455 + 1 1.841 77418.3 1.0 2801 3385 6181 DOHH2_400M_050219_2,6188 DOHH2_400M_050219_2,6188,AEEEIMKKI True True AEEEIMKKI 32.883239 545.794848620892 2811326.5 6181.0 ENSG00000136231|ENST00000258729|IGF2BP3;;ENST00000454907.1_1_6:167115266-167115902:-|nuORF 2.928277889887492 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6189 32.889 324.0 400640.0 25 0 37279.0 + 7152 EENMRGVRF 9 122 379.85389947381833 1136.539869021655 3 379.8539001345634 MULTI CID FTMS 0 0 0 6181 204681.5625 1.0 0 0.0 8 Unmodified _EENMRGVRF_ ENSG00000167658|ENST00000309311|EEF2 61.357469665136826 0.0253304979873734 2 EENMRRR{M(Oxidation (M))|F} 8 2 + 75.442 0.0 0.0 6.6379 6.6379 81.285 0.0 0.0 0.0 44.95223436450907 11.894330638623591 11.894330638623591 2.552725051033065 0 0.1643943297944484 1.0 0.0 1.548455006504028 EENMRRR{M(Oxidation (M))|F};EENMRGVR{M(Oxidation (M))|F};EEGGMRRR{M(Oxidation (M))|F};EENM[VG]RR{M(Oxidation (M))|F};EEGGMRGVR{M(Oxidation (M))|F};EENM[VG]GVR{M(Oxidation (M))|F};EEGGM[VG]RR{M(Oxidation (M))|F};EEGGM[VG]GVR{M(Oxidation (M))|F};[HA]{I|L}RRMN[HC];[HA]{I|L}VGRMN[HC] 6.6379;6.4133;5.8229;5.8229;5.6031;5.6031;5.0127;4.7967;3.2031;2.9832 -;+;-;-;-;-;-;-;-;- + 438 + 1 1.841 106991.2 1.0 2802 3385 6181 DOHH2_400M_050219_2,6189 DOHH2_400M_050219_2,6189,EENMRGVRF True True EENMRGVRF 32.889137 379.853900134563 1511269.375 6181.0 ENSG00000167658|ENST00000309311|EEF2 4.634326299031575 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6190 32.898 516.0 200570.0 25 0 25127.0 + 649 AELRSPNEF 9 136 531.7645834664265 0 531.7648193240166 PEAK CID FTMS 0 0 0 6181 126627.8671875 1.0 0 0.0 9 Unmodified _AELRSPNEF_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000577409.1_1_18:72183591-72185955:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 34.93206674587334 0.0866320009191956 2 EAE 3 7 13.962 0.0 0.0 1.3153 0.0 0.0 165.07992326195614 564.2900484674436 729.3699717293998 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 EAE 1.3153 - 653 + 1 1.841 82475.3 1.0 2803 3385 6181 DOHH2_400M_050219_2,6190 DOHH2_400M_050219_2,6190,AELRSPNEF True True AELRSPNEF 32.898229 531.764819324017 722532.3125 6181.0 ENSG00000133313|ENST00000324262|CNDP2;;nc|ENSG00000133313|Q96KP4-2|CNDP2;;ENST00000577409.1_1_18:72183591-72185955:+|nuORF 5.9150058428446455 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6191 32.912 800.0 259460.0 25 0 22596.0 -1 KYFCQCCHEN 10 139 666.2493661669338 1330.4841794006677 2 666.2498657107353 MULTI CID FTMS 0 0 0 6181 106691.7265625 1.0 0 0.0 10 Carbamidomethyl (C) _KYFC(Carbamidomethyl (C))QCCHEN_ ENSG00000145016|ENST00000296343|RUBCN;nc|ENSG00000145016|Q92622-2|RUBCN;nc|ENSG00000145016|Q92622-3|RUBCN 32.78568957990786 0.2337485590374503 2 YK{M(Oxidation (M))|F}DE 5 -1 52.242 0.0 0.0 3.9265 0.0 0.0 0.0 645.1635225885374 645.1635225885374 28.38664284309805 0.0 0.0 0.0 0 0.805462187404089 0.0 1.4634679910804405 0.0 YK{M(Oxidation (M))|F}DE 3.9265 - 332 + 1 1.841 152523.0 0.6700000166893005 2804 3385 6181 DOHH2_400M_050219_2,6191 DOHH2_400M_050219_2,6191,KYFCQCCHEN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6192 32.926 800.0 157810.0 25 0 8881.6 + -1 EYASCCGNPWC 11 143 673.7312499880791 0 673.7312499880791 PEAK CID FTMS 0 0 0 -1 0 11 2 Carbamidomethyl (C) _EYASC(Carbamidomethyl (C))C(Carbamidomethyl (C))GNPWC_ REV__ENSG00000111412|ENST00000261318|SPRING1 5.296884461304476 0.47618401536486 2 Y{M(Oxidation (M))|F}YY{M(Oxidation (M))|F}D 6 -1 44.391 0.0 0.0 3.2993 0.0 0.0 127.08752558575004 316.99933801822505 444.0868636039751 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 1.385151878060192 0.0 Y{M(Oxidation (M))|F}YY{M(Oxidation (M))|F}D 3.2993 - 172 + 1 1.841 97224.1 0.6399999856948853 2805 3385 6181 DOHH2_400M_050219_2,6192 DOHH2_400M_050219_2,6192,EYASCCGNPWC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6193 32.929 165.0 360140.0 25 0 19525.0 + 25532 NEQTLQRSW 9 99 581.2853364500438 1160.5561199668875 2 581.2859374880791 MULTI CID FTMS 0 0 0 6181 265785.75 1.0 0 0.0 12 Unmodified _NEQTLQRSW_ ENSG00000127952|ENST00000359697|STYXL1;nc|ENSG00000127952|Q9Y6J8-4|STYXL1 61.60191391372663 0.0251951588191061 2 {[QD]|[EN]|[WG]|[KD]|[RS]}QT{I|L}QRSW 9 0 + 56.023 0.0 0.0 4.8272 4.8272 76.012 0.0 0.0 0.0 7.147642715192504 3.5654732351381213 3.5654732351381213 3.5654732351381213 0 0.805462187404089 0.0 0.3807196863200844 0.7742275032520141 + + {[QD]|[EN]|[WG]|[KD]|[RS]}QT{I|L}QRSW;{[QD]|[EN]|[WG]|[KD]|[RS]}QT{I|L}[RH]TY;{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]T{I|L}QRSW;{[QD]|[EN]|[WG]|[KD]|[RS]}QT{I|L}[AG]RSW;{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]T{I|L}[RH]TY;{[QD]|[EN]|[WG]|[KD]|[RS]}Q[WR]RSW;{[QD]|[EN]|[WG]|[KD]|[RS]}Q[HK]{[QN]|[E{I|L}]|[KN]}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]T{I|L}[AG]RSW;{[QD]|[EN]|[WG]|[KD]|[RS]}QT{I|L}Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG];{[QD]|[EN]|[WG]|[KD]|[RS]}[AG][WR]RSW 4.8272;4.52;4.0338;4.0338;3.7266;3.4315;3.4231;3.2442;3.0887;2.6335 +;-;-;-;-;-;-;-;-;- + 261 + 1 1.841 51119.5 1.0 2806 3385 6181 DOHH2_400M_050219_2,6193 DOHH2_400M_050219_2,6193,NEQTLQRSW True True NEQTLQRSW 32.929155 581.285937488079 1365827.625 6181.0 nc|ENSG00000127952|Q9Y6J8-4|STYXL1;;ENSG00000127952|ENST00000359697|STYXL1 7.879209677378337 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6194 32.943 800.0 169790.0 25 0 5873.9 -1 0 114 635.7892766176599 2539.12800060424 4 636.0403930544853 MULTI CID FTMS 0 0 0 6181 236001.6875 1.0 0 0.0 13 2 [Y{I|L}]ND{I|L}[C(Carbamidomethyl (C))C]C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}SHKDDS[DP]{I|L}[KP] 21 -1 [Y{I|L}]ND{I|L}[C(Carbamidomethyl (C))C]C(Carbamidomethyl (C)) + + 37.952 6.6276 0.63643 1.4947 1.4947 47.116 0.0 0.0 0.0 0.0 22.46086660067784 0.0 0.0 0 0.0 0.0 0.0 0.1747425010840047 [Y{I|L}]ND{I|L}[C(Carbamidomethyl (C))C]C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}SHKDDS[DP]{I|L}[KP] 1.4947 - 1310 + 1 1.841 100920.9 0.9300000071525574 2807 3385 6181 DOHH2_400M_050219_2,6194 DOHH2_400M_050219_2,6194, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6195 32.958 800.0 131340.0 25 0 7584.7 -1 0 62 787.7098147310535 0 787.8332397341728 PEAK CID FTMS 0 0 0 -1 0 14 2 KY 2 -1 12.206 0.0 0.0 0.77578 0.0 0.0 280.8664688605764 998.3572055630348 1279.223674423611 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 KY 0.77578 - 22 + 1 1.841 79540.0 0.7699999809265137 2808 3385 6181 DOHH2_400M_050219_2,6195 DOHH2_400M_050219_2,6195, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6196 32.972 800.0 76619.0 25 0 5467.8 + 25885 NLIKKTVL 8 101 464.81329606400095 927.612039194802 2 464.8132202029228 MULTI CID FTMS 0 0 0 6181 105274.6875 0.0362518794257705 7 -0.5639305114746094 15 Unmodified _NLIKKTVL_ ENSG00000163811|ENST00000407426|WDR43;ENST00000466067.1_1_2:29147965-29158512:+|nuORF 16.942295170755138 0.6606234159769251 2 {I|L} 1 7 13.495 0.0 0.0 1.4548 0.0 0.0 796.516791857691 0.0 796.516791857691 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4548 + + 62 + 1 1.841 53553.8 0.6399999856948853 2809 3385 6181 DOHH2_400M_050219_2,6196 DOHH2_400M_050219_2,6196,NLIKKTVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6197 32.983 640.0 245840.0 25 0 15678.0 40095 VGILHKDFES 10 205 382.2055991281667 0 382.2058593630791 PEAK CID FTMS 0 0 0 6181 108043.171875 1.0 0 0.0 16 Unmodified _VGILHKDFES_ ENSG00000135837|ENST00000367607|CEP350 3.944395688203298 0.3961065659209837 2 {I|L} 1 9 3.9794 0.0 0.0 0.52196 0.0 0.0 381.199863925444 265.0841463678344 646.2840102932784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.52196 + + 7 + 1 1.841 122593.8 1.0 2810 3385 6181 DOHH2_400M_050219_2,6197 DOHH2_400M_050219_2,6197,VGILHKDFES False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6198 32.998 800.0 149550.0 25 0 8918.9 + 7000 EEIQPHQW 8 156 533.7515746951103 0 533.7515746951103 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _EEIQPHQW_ ENSG00000116580|ENST00000368331|GON4L;ENSG00000163374|ENST00000355499|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-4|YY1AP1;nc|ENSG00000163374|Q9H869-5|YY1AP1;nc|ENSG00000163374|Q9H869-6|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1 24.67388899826682 0.3296343502680589 2 Q 1 7 6.9897 0.0 0.0 0.65601 0.0 0.0 703.3174061267456 231.08941065006096 934.4068167768064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Q 0.65601 + + 69 + 1 1.841 96478.4 0.7099999785423279 2811 3385 6181 DOHH2_400M_050219_2,6198 DOHH2_400M_050219_2,6198,EEIQPHQW False True EEIQPHQW 32.998251 533.75157469511 339345.40625 6181.0 nc|ENSG00000163374|Q9H869-6|YY1AP1;;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;;nc|ENSG00000163374|Q9H869-8|YY1AP1;;nc|ENSG00000163374|Q9H869|YY1AP1;;nc|ENSG00000163374|Q9H869-9|YY1AP1;;nc|ENSG00000116580|Q3T8J9-2|GON4L;;ENSG00000163374|ENST00000355499|YY1AP1;;nc|ENSG00000163374|Q9H869-4|YY1AP1;;ENSG00000116580|ENST00000368331|GON4L;;nc|ENSG00000163374|Q9H869-7|YY1AP1;;nc|ENSG00000163374|Q9H869-3|YY1AP1;;nc|ENSG00000116580|Q3T8J9-3|GON4L;;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;;nc|ENSG00000163374|Q9H869-5|YY1AP1 5.337920824686687 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6199 33.012 800.0 41820.0 25 0 3115.0 -1 LLCFYCCFYQT 11 63 780.3226196169853 0 780.3226196169853 PEAK CID FTMS 0 0 0 -1 0 18 Acetyl (Protein N-term),2 Carbamidomethyl (C) _(Acetyl (Protein N-term))LLC(Carbamidomethyl (C))FYC(Carbamidomethyl (C))CFYQT_ ENST00000469098.1_1_2:37594344-37599967:+|nuORF 0.3506318815782774 0.47618401536486 2 EYGV 4 -1 15.65 0.0 0.0 1.0041 0.0 0.0 447.16538113773305 660.2463472955686 1107.4117284333015 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 EYGV 1.0041 - 49 + 1 1.841 30351.5 0.699999988079071 2812 3385 6181 DOHH2_400M_050219_2,6199 DOHH2_400M_050219_2,6199,LLCFYCCFYQT False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6200 33.026 800.0 174260.0 25 0 20162.0 -1 0 56 1062.602838553912 6369.573372523873 6 1063.272265613079 MULTI CID FTMS 0 0 0 6181 99096.1484375 0.8296531284864423 3 -0.3835029602050781 19 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.841 94865.7 0.5699999928474426 2813 3385 6181 DOHH2_400M_050219_2,6200 DOHH2_400M_050219_2,6200, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6202 33.03 1.6 19866000.0 25 0 2325000.0 + 18448 KYFDEHYEY 9 56 647.2748017189234 1292.5350505046467 2 647.2759887576103 MULTI CID FTMS 0 0 0 6201 26242196.0 0.4011003781583171 1 -0.1236534118652343 1 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 60.07390631473393 0.0260411565414776 2 KY{M(Oxidation (M))|F}YY{[MS]|[{M(Oxidation (M))|F}A]}EY 9 4 + 56.838 0.0 0.0 4.3974 4.3974 84.173 0.0 0.0 0.0 25.00753498175278 7.236286549994659 7.236286549994659 16.977437731477416 0 1.1989700043360187 0.0 0.8807196863200843 0.0 KY{M(Oxidation (M))|F}YY{[MS]|[{M(Oxidation (M))|F}A]}EY;{[YC]|[HE]}D{M(Oxidation (M))|F}YKYEY;[Y{M(Oxidation (M))|F}]YKY{[MS]|[{M(Oxidation (M))|F}A]}EY;{[YC]|[HE]}D{M(Oxidation (M))|F}YYKEY;[YE][H{I|L}][YN]YEY;[Y{M(Oxidation (M))|F}]KYY{[MS]|[{M(Oxidation (M))|F}A]}EY;[Y{M(Oxidation (M))|F}]WWHYEY;{[YC]|[HE]}[Y{I|L}][YN]YEY;{[WN]|[YH]}{[QN]|[E{I|L}]|[KN]}[YN]YEY;{[YC]|[HE]}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[ES]|[DT]|[{I|L}C]}KEY 4.3974;3.0839;2.5224;2.2861;2.2352;1.7245;1.2066;0.55166;0.38002;0.25919 -;-;-;-;-;-;-;-;-;- 155 + 1 1.831 31475.6 1.0 2814 3386 6201 DOHH2_400M_050219_2,6202 DOHH2_400M_050219_2,6202,KYFDEHYEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6203 33.032 3.0 13132000.0 25 0 3552800.0 + 18452 KYFDEHYEY 9 54 431.85241170784207 1292.5354057237262 3 431.8528015017509 MULTI CID FTMS 0 0 0 6201 11901224.0 0.4171076746998483 1 -0.1236534118652343 2 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 9.38312468134398 0.5871240394367778 2 Y 1 8 15.485 0.0 0.0 1.198 0.0 0.0 1111.4612002567324 0.0 1111.4612002567324 0.0 -6.210149894766701 -6.210149894766701 0.0 0 0.0 0.0 0.0 0.0 + Y 1.198 + + 18 + 1 1.831 40276.3 1.0 2815 3386 6201 DOHH2_400M_050219_2,6203 DOHH2_400M_050219_2,6203,KYFDEHYEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6204 33.033 47.0 1103700.0 25 0 263600.0 + 36225 SVYPPPPEK 9 68 507.2709592666536 1012.5273656001071 2 507.2706786990166 MULTI CID FTMS 0 0 0 6201 1082928.125 0.6555227217560217 -1 0.1656723022460937 3 Unmodified _SVYPPPPEK_ REV__ENSG00000104341|ENST00000521545|LAPTM4B;REV__nc|ENSG00000104341|Q86VI4|LAPTM4B 18.1463463914782 0.3454829746528889 2 [VS]YMATT{I|L}K 9 -1 + 79.99 0.0 0.0 7.9 7.9 97.985 0.0 0.0 0.0 54.04737847600778 12.268346155512972 12.268346155512972 79.98950344665481 0 0.8494850021680094 2.0 0.75 0.1421590589602531 [VS]YMATT{I|L}K 7.9 - 70 + 1 1.831 43085.0 1.0 2816 3386 6201 DOHH2_400M_050219_2,6204 DOHH2_400M_050219_2,6204,SVYPPPPEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6205 33.035 98.0 689340.0 25 0 64896.0 + 5619 DPCIYKFYEFY 11 60 744.3309771640446 1486.6474013948891 2 744.3319579958916 MULTI CID FTMS 0 0 0 6201 637423.6875 0.8652604444560581 1 -0.1236534118652343 4 Unmodified _DPCIYKFYEFY_ REV__ENSG00000163840|ENST00000296161|DTX3L 5.731851221503515 0.8481046878870278 2 {[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y 12 -1 + 64.09 0.0 0.0 4.3111 4.3111 69.102 0.0 0.0 0.0 0.1754178390725869 10.827179839787924 0.1754178390725869 0.1754178390725869 0 0.8935078169319297 0.0 0.0 1.2302046884880935 {[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]A[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F}Y 4.3111;4.2993;4.2575;3.7758;3.6991;3.6991;3.6991;3.689;3.689;3.689 -;-;-;-;-;-;-;-;-;- 868 1 1.831 52685.2 1.0 2817 3386 6201 DOHH2_400M_050219_2,6205 DOHH2_400M_050219_2,6205,DPCIYKFYEFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6206 33.04 283.0 303180.0 25 0 51155.0 + 45132 YQDPDATSLKY 11 100 650.8056165311503 0 650.8055297732353 PEAK CID FTMS 0 0 0 6201 251207.265625 1.0 0 0.0 5 Unmodified _YQDPDATSLKY_ ENSG00000131778|ENST00000369258|CHD1L;nc|ENSG00000131778|Q86WJ1-2|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L;nc|ENSG00000131778|Q86WJ1-5|CHD1L 46.0223103267499 0.0821528361752149 2 DQ 2 10 22.123 0.0 0.0 1.7023 0.0 0.0 893.4470202904575 160.04070459537346 1053.487724885831 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.805462187404089 DQ 1.7023 - 141 + 1 1.831 66362.6 1.0 2818 3386 6201 DOHH2_400M_050219_2,6206 DOHH2_400M_050219_2,6206,YQDPDATSLKY True True YQDPDATSLKY 33.040169 650.805529773235 1456698.125 6201.0 nc|ENSG00000131778|Q86WJ1-3|CHD1L;;nc|ENSG00000131778|Q86WJ1-5|CHD1L;;nc|ENSG00000131778|Q86WJ1-2|CHD1L;;nc|ENSG00000131778|Q86WJ1-4|CHD1L;;ENSG00000131778|ENST00000369258|CHD1L 7.759043375651042 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6207 33.047 386.0 369210.0 25 0 33240.0 35240 SSDWALLRE 9 145 538.77191982269 0 538.7723876833916 PEAK CID FTMS 0 0 0 6201 250931.890625 1.0 0 0.0 6 Unmodified _SSDWALLRE_ ENSG00000143194|ENST00000367872|MAEL 21.74664581756881 0.185237546287679 2 YD{I|L}DR 5 6 29.341 0.0 0.0 2.7281 0.0 0.0 147.06743883240728 263.10398279361567 410.17142162602295 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.3054621874040891 0.0 YD{I|L}DR 2.7281 - 196 + 1 1.831 110145.0 1.0 2819 3386 6201 DOHH2_400M_050219_2,6207 DOHH2_400M_050219_2,6207,SSDWALLRE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6208 33.061 800.0 242270.0 25 0 17032.0 + 4711 DEAGGYVKVY 10 176 550.7661237619147 1099.5176945906294 2 550.7648193240166 MULTI CID FTMS 0 0 0 6201 210420.90625 1.0 0 0.0 7 Unmodified _DEAGGYVKVY_ ENSG00000185482|ENST00000332782|STAC3;nc|ENSG00000185482|Q96MF2-2|STAC3;nc|ENSG00000185482|Q96MF2-3|STAC3 72.96794272382148 0.0188410189619069 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AYNVKVY 9 3 + 42.481 0.0 0.0 3.8636 3.8636 72.672 0.0 0.0 0.0 17.624562618571247 14.092568545288051 14.092568545288051 3.697887582883936 0 2.024227503252014 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AYNVKVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AG[YG]VKVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AG[YR]KVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AYGGVKVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AYAAAKVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[YG]VKVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[YR]KVY;[{I|L}P][TP]VN[C(Carbamidomethyl (C))H]Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AG[YK][RV]Y;[YN]VKV[WE]Y 3.8636;3.5273;3.4136;3.0261;2.8708;2.8207;2.7119;2.3359;2.2953;2.155 -;+;-;-;-;-;-;-;-;- + 3280 + 1 1.831 148621.6 1.0 2820 3386 6201 DOHH2_400M_050219_2,6208 DOHH2_400M_050219_2,6208,DEAGGYVKVY True True DEAGGYVKVY 33.060928 550.764819324017 1496861.5 6201.0 nc|ENSG00000185482|Q96MF2-2|STAC3;;ENSG00000185482|ENST00000332782|STAC3;;nc|ENSG00000185482|Q96MF2-3|STAC3 5.850931803385417 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6209 33.069 477.0 281000.0 25 0 37925.0 + 39237 VAAAHSVVL 9 134 433.7579407436206 865.5013285540413 2 433.7582275271416 MULTI CID FTMS 0 0 0 6201 139471.96875 0.6720848334298093 -1 0.1656723022460937 8 Unmodified _VAAAHSVVL_ ENSG00000131558|ENST00000253861|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;nc|ENSG00000131558|Q96A65-2|EXOC4 53.57557251787612 0.0325303259649373 2 SVAVV{I|L} 6 5 50.5 0.0 0.0 5.8347 0.0 0.0 279.13340956855626 0.0 279.13340956855626 0.0 33.64252862143409 0.0 0.0 0 0.7614393726401688 0.0 1.4916440611282624 0.0 SVAVV{I|L} 5.8347 - 456 1 1.831 107509.2 1.0 2821 3386 6201 DOHH2_400M_050219_2,6209 DOHH2_400M_050219_2,6209,VAAAHSVVL True True VAAAHSVVL 33.069367 433.7598 1286853.5 6201.0 ENSG00000131558|ENST00000253861|EXOC4;;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;;nc|ENSG00000131558|Q96A65-2|EXOC4;;ENST00000462055.5_1_7:132937857-133164897:+|nuORF 5.665610472361247 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6210 33.083 800.0 70718.0 25 0 4001.2 + -1 KEQQQQQMW 9 113 625.284574601164 0 625.2867309451103 PEAK CID FTMS 0 0 0 6201 112601.9296875 1.0 0 0.0 9 Oxidation (M) _KEQQQQQM(Oxidation (M))W_ ENSG00000145088|ENST00000273668|EAF2 17.11289562659939 0.230679707888486 2 QQ 2 -1 12.474 0.0 0.0 0.9991 0.0 0.0 351.1209072630359 638.2885836236936 989.4094908867296 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 QQ 0.9991 + + 33 + 1 1.831 50149.1 0.8100000023841858 2822 3386 6201 DOHH2_400M_050219_2,6210 DOHH2_400M_050219_2,6210,KEQQQQQMW False False KEQQQQQMW 33.083207 625.28673094511 1094581.125 6201.0 ENSG00000145088|ENST00000273668|EAF2 4.177615642547607 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6211 33.097 800.0 221620.0 25 0 23367.0 + 2270 AQGGQEAYF 9 155 485.716840826864 0 485.7169067263603 PEAK CID FTMS 0 0 0 6201 103204.3046875 1.0 0 0.0 10 Unmodified _AQGGQEAYF_ REV__ENSG00000124608|ENST00000244571|AARS2 39.957323273325 0.0619271662220897 2 AQNA 4 -1 16.965 0.0 0.0 1.75 0.0 0.0 346.1540171548688 236.06858240299064 582.2225995578594 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.0044321917401078 AQNA 1.75 - 128 + 1 1.831 137862.6 0.6800000071525574 2823 3386 6201 DOHH2_400M_050219_2,6211 DOHH2_400M_050219_2,6211,AQGGQEAYF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6212 33.099 95.0 617780.0 25 0 52514.0 + -1 ILIAAQTMK 9 106 502.7940534913899 0 502.7932311892509 PEAK CID FTMS 0 0 0 6201 378758.34375 1.0 0 0.0 11 Oxidation (M) _ILIAAQTM(Oxidation (M))K_ REV__ENSG00000108509|ENST00000348066|CAMTA2;REV__ENSG00000171735|ENST00000303635|CAMTA1;REV__ENST00000574442.1_1_17:4872053-4872704:-|nuORF;REV__ENST00000574951.5_1_17:4872053-4885503:-|nuORF;REV__nc|ENSG00000108509|O94983-2|CAMTA2;REV__nc|ENSG00000108509|O94983-3|CAMTA2;REV__nc|ENSG00000108509|O94983-4|CAMTA2;REV__nc|ENSG00000108509|O94983-5|CAMTA2;REV__nc|ENSG00000108509|O94983-6|CAMTA2;REV__nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1 18.1463463914782 0.2188250594445807 2 KTT 3 -1 25.974 0.0 0.0 2.5882 0.0 0.0 63.9970377958519 606.3635347955686 670.3605725914206 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.8494850021680094 0.0 KTT 2.5882 - 78 + 1 1.831 48363.5 1.0 2824 3386 6201 DOHH2_400M_050219_2,6212 DOHH2_400M_050219_2,6212,ILIAAQTMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6213 33.108 411.0 213340.0 25 0 25948.0 + 9411 FKEAWHGL 8 120 494.2566813550397 0 494.2533447146416 PEAK CID FTMS 0 0 0 6201 135842.53125 0.7518355667074124 7 -0.4070968627929687 12 Unmodified _FKEAWHGL_ REV__ENSG00000101251|ENST00000284951|SEL1L2 9.347437153973935 0.5488964601725408 2 VSG 3 -1 8.6721 0.0 0.0 0.87908 0.0 0.0 157.99609364001066 582.3312471979124 740.327340837923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VSG 0.87908 - 104 + 1 1.831 70560.6 1.0 2825 3386 6201 DOHH2_400M_050219_2,6213 DOHH2_400M_050219_2,6213,FKEAWHGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6214 33.122 800.0 244760.0 25 0 25288.0 -1 0 88 852.2143242386012 4256.035238860006 5 852.6153442263603 MULTI CID FTMS 0 0 0 6201 118660.890625 1.0 0 0.0 13 2 V[PS]GGY[PS]PQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 12 -1 32.36 0.0 0.0 0.76034 0.0 0.0 2974.440854412044 0.0 2974.440854412044 0.0 0.154171688421556 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.3252574989159953 V[PS]GGY[PS]PQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 0.76034 - 291 + 1 1.831 138613.9 0.5799999833106995 2826 3386 6201 DOHH2_400M_050219_2,6214 DOHH2_400M_050219_2,6214, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6215 33.136 800.0 140620.0 25 0 15864.0 -1 0 66 850.2135924087071 0 850.2125121951103 PEAK CID FTMS 0 0 0 6201 109417.6640625 1.0 0 0.0 14 2 PQ 2 -1 8.5835 0.0 0.0 0.50538 0.0 0.0 1161.1558702648765 309.1204928033813 1470.2763630682578 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PQ 0.50538 - 53 + 1 1.831 83795.0 0.5600000023841858 2827 3386 6201 DOHH2_400M_050219_2,6215 DOHH2_400M_050219_2,6215, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6216 33.149 800.0 165490.0 25 0 14911.0 + -1 VEAGAGTGW 9 102 846.8090144819522 4229.008690076761 5 847.6127807497978 MULTI CID FTMS 0 0 0 6201 88103.0390625 0.362755377661038 2 -0.2178306579589843 15 ENSG00000198804|ENST00000361624|MT-CO1 2 AGAQ{[WS]|[C(Carbamidomethyl (C)){I|L}]} 6 -1 14.698 0.0 0.0 0.34755 0.0 0.0 3610.7301389066415 0.0 3610.7301389066415 0.0 2.2750717254474058 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 AGAQ{[WS]|[C(Carbamidomethyl (C)){I|L}]} 0.34755 - 756 + 1 1.831 93590.0 0.5199999809265137 2828 3386 6201 DOHH2_400M_050219_2,6216 DOHH2_400M_050219_2,6216, False False VEAGAGTGW 33.149383 847.612780749798 2880722.75 6201.0 ENSG00000198804|ENST00000361624|MT-CO1 3.364065170288086 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6218 33.154 12.0 4322600.0 25 0 443180.0 + 35215 SSDPASQLSY 10 90 527.7378814488542 1053.4612099645085 2 527.7381469607353 MULTI CID FTMS 0 0 0 6217 5443404.0 1.0 0 0.0 1 Unmodified _SSDPASQLSY_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000536066.1_1_12:2967806-2973707:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 110.6747026088012 0.0022459829274162 2 {[CA]|SS}D[PA]SQ{I|L}SY 10 0 + 56.722 0.0 0.0 5.3843 5.3843 75.2 0.0 0.0 0.0 1.365006360318688 4.3791654952092784 1.365006360318688 1.365006360318688 0 1.5629529932484498 0.0 2.221848749616356 0.0 + + {[CA]|SS}D[PA]SQ{I|L}SY;{[C(Carbamidomethyl (C))E]|[WC]}[PA]SQ{I|L}SY;[HM]{I|L}Q[{M(Oxidation (M))|F}E]SY;[PA]{[C(Carbamidomethyl (C))E]|[WC]}SQ{I|L}SY;{[CA]|SS}D[PA]S[AG]{I|L}SY;[PA]D{[CA]|SS}SQ{I|L}SY;{[C(Carbamidomethyl (C))E]|[WC]}[PA]S[AG]{I|L}SY;[HM]{I|L}[AG][{M(Oxidation (M))|F}E]SY;[PA]{[C(Carbamidomethyl (C))E]|[WC]}S[AG]{I|L}SY;[PA]S{[C(Carbamidomethyl (C))E]|[WC]}Q{I|L}SY 5.3843;5.2548;4.9687;4.8194;4.5144;4.4509;4.3807;4.0894;3.9453;3.8748 +;-;-;-;-;-;-;-;-;- + 680 1 1.832 41877.7 1.0 2829 3387 6217 DOHH2_400M_050219_2,6218 DOHH2_400M_050219_2,6218,SSDPASQLSY True True SSDPASQLSY 33.154019 527.738146960735 132252660.0 6217.0 ENSG00000111206|ENST00000359843|FOXM1;;nc|ENSG00000111206|Q08050-2|FOXM1;;ENST00000536066.1_1_12:2967806-2973707:-|nuORF;;nc|ENSG00000111206|Q08050-3|FOXM1 7.625368118286133 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6219 33.156 115.0 400100.0 25 0 50397.0 + 40398 VIDQQNGLY 9 85 525.2664138896658 1048.5182748461316 2 525.2668334841728 MULTI CID FTMS 0 0 0 6217 405910.03125 0.3471020866656319 1 -0.09417724609375 2 Unmodified _VIDQQNGLY_ ENSG00000132383|ENST00000254719|RPA1 26.88365393820708 0.1891292719743517 2 {NN|[MP]|[D{I|L}]|[EV]}QQGNV{I|L}Y 9 3 + 34.258 0.0 0.0 3.2673 3.2673 74.366 0.0 0.0 0.0 9.289653508527929 11.0827208845118 9.289653508527929 6.822333069283651 0 1.4252261260283046 1.2218487496163564 0.0 0.9247425010840048 {NN|[MP]|[D{I|L}]|[EV]}QQGNV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}QQV[NG]{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}V[TP][DN]{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}[AG]QGNV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}Q[AG]GNV{I|L}Y;[{I|L}V]D[TP][DN]{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}QQ[RN]{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}Q[NG]{I|L}V{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}VQQ[NG]{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}GNV{I|L}Y 3.2673;2.6166;2.6147;2.3891;2.3891;2.3813;2.2859;2.101;2.0522;1.8686 -;-;-;-;-;-;-;-;-;- 194 1 1.832 41731.4 1.0 2830 3387 6217 DOHH2_400M_050219_2,6219 DOHH2_400M_050219_2,6219,VIDQQNGLY False True VIDQQNGLY 33.156425 525.266833484173 14304463.0 6217.0 ENSG00000132383|ENST00000254719|RPA1 5.088721513748169 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6220 33.159 113.0 507970.0 25 0 49462.0 + 6167 DTDAQQAFKY 10 85 593.7713719800079 1185.5281910268156 2 593.7720825076103 MULTI CID FTMS 0 0 0 6217 502512.53125 1.0 0 0.0 3 Unmodified _DTDAQQAFKY_ ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-5|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4 103.41943736471065 0.0068563894390004 2 {[ES]|[DT]|[{I|L}C]}DAQQA{M(Oxidation (M))|F}KY 10 0 + 85.187 0.0 0.0 7.1856 7.1856 89.394 0.0 0.0 0.0 7.269987279362624 9.030899869919438 7.269987279362624 9.030899869919438 0 1.610924374808178 0.0 0.0 1.0941876774005248 + + {[ES]|[DT]|[{I|L}C]}DAQQA{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}DAQQA{M(Oxidation (M))|F}YK;{[ES]|[DT]|[{I|L}C]}DAQ[AG]A{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}DA[AG]QA{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}WQQA{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}DA[AG]QA{M(Oxidation (M))|F}YK;{[ES]|[DT]|[{I|L}C]}DAQ[AG]A{M(Oxidation (M))|F}YK;{[ES]|[DT]|[{I|L}C]}DA[AG][AG]A{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}WQQA{M(Oxidation (M))|F}YK;{[ES]|[DT]|[{I|L}C]}W[AG]QA{M(Oxidation (M))|F}KY 7.1856;6.4238;6.4126;6.4126;6.3135;5.6508;5.6508;5.6426;5.5517;5.5367 +;-;-;-;-;-;-;-;-;- + 605 + 1 1.832 45778.5 1.0 2831 3387 6217 DOHH2_400M_050219_2,6220 DOHH2_400M_050219_2,6220,DTDAQQAFKY True True DTDAQQAFKY 33.158802 593.77208250761 2802569.75 6217.0 nc|ENSG00000161813|Q71RC2-4|LARP4;;nc|ENSG00000161813|Q71RC2-3|LARP4;;nc|ENSG00000161813|Q71RC2-2|LARP4;;nc|ENSG00000161813|Q71RC2-5|LARP4;;nc|ENSG00000161813|Q71RC2-7|LARP4;;nc|ENSG00000161813|Q71RC2-6|LARP4;;ENSG00000161813|ENST00000398473|LARP4 10.041734377543133 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6221 33.162 138.0 412100.0 25 0 42047.0 20999 LNRHSQSFHHQ 11 73 695.8394623814311 1389.664371829662 2 695.8390380740166 MULTI CID FTMS 0 0 0 6217 424764.96875 0.8140907360553543 -1 0.1236534118652343 4 Unmodified _LNRHSQSFHHQ_ ENST00000312858.9_3_14:76668227-76668383:+|nuORF 26.268140514670165 0.4754186812857754 2 {[QV]|[N{I|L}]|[RA]|[KV]}N 3 9 44.582 0.0 0.0 3.2081 0.0 0.0 0.0 1045.471475671712 1045.471475671712 9.628370196885626 0.0 0.0 0.0 0 1.0 2.0 0.0 0.7134679910804405 {[QV]|[N{I|L}]|[RA]|[KV]}N 3.2081 - 82 1 1.832 48048.8 1.0 2832 3387 6217 DOHH2_400M_050219_2,6221 DOHH2_400M_050219_2,6221,LNRHSQSFHHQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6222 33.166 246.0 261030.0 25 0 28003.0 + 2624 ASSPHGLVM 9 114 449.7265171298487 897.4384813264974 2 449.7263061404228 MULTI CID FTMS 0 0 0 6217 232947.796875 0.8725352466301367 -1 0.1236534118652343 5 Unmodified _ASSPHGLVM_ ENSG00000179021|ENST00000318887|C3orf38;nc|nan|Q5JPI3-2|C3orf38 38.15118350030904 0.0856056900103839 2 VSRVM 5 6 30.322 0.0 0.0 3.3788 0.0 0.0 307.1201352345036 0.0 307.1201352345036 0.0 17.84801742864806 0.0 0.0 0 0.5 0.0 0.5629529932484498 0.0 VSRVM 3.3788 - 380 + 1 1.832 55215.2 1.0 2833 3387 6217 DOHH2_400M_050219_2,6222 DOHH2_400M_050219_2,6222,ASSPHGLVM True True ASSPHGLVM 33.166179 449.726306140423 1568177.0 6217.0 ENSG00000179021|ENST00000318887|C3orf38;;nc|nan|Q5JPI3-2|C3orf38 1.0905817846457164 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6223 33.17 201.0 402790.0 25 0 78089.0 34307 SLRNLNII 8 89 471.7899828071003 941.5654126810006 2 471.7903320193291 MULTI CID FTMS 0 0 0 6217 215268.84375 1.0 0 0.0 6 Unmodified _SLRNLNII_ ENSG00000152104|ENST00000366956|PTPN14 28.486842064014134 0.4448922141344407 2 D{I|L}K 3 7 48.94 0.0 0.0 5.1977 0.0 0.0 0.0 582.334107385577 582.334107385577 33.23908740944319 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 D{I|L}K 5.1977 - 91 + 1 1.832 65133.0 1.0 2834 3387 6217 DOHH2_400M_050219_2,6223 DOHH2_400M_050219_2,6223,SLRNLNII False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6224 33.175 260.0 424990.0 25 0 63043.0 + 45580 YVEINGEKY 9 114 557.7744009040366 1113.5342488748731 2 557.7740356326103 MULTI CID FTMS 0 0 0 6217 192789.015625 0.6185613158171258 -1 0.1236534118652343 7 Unmodified _YVEINGEKY_ ENSG00000149418|ENST00000278742|ST14;ENST00000524718.5_1_11:130059967-130066600:+|nuORF 36.506200033944 0.094635877243972 2 YVE{I|L}N{[DA]|[EG]}KY 9 0 + 81.164 0.0 0.0 7.2888 7.2888 91.218 0.0 0.0 0.0 64.93546493294772 8.16061246681059 8.16061246681059 9.208187539523747 0 0.9247425010840048 2.0 0.3807196863200844 0.3494850021680094 + + YVE{I|L}N{[DA]|[EG]}KY;YVE{I|L}GG{[DA]|[EG]}KY;YVE{I|L}N[WH][PG];YVE{I|L}GG[WH][PG];{[YC]|[HE]}[KT]N{I|L}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[YC]|[HE]}[KT]GG{I|L}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[RH]D[WK]E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}Y[WK]D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[RH]H{[MG]|[TS]}{[DA]|[EG]}KY;[RH][NP]N{[DA]|[EG]}KY 7.2888;6.4619;5.5859;4.4451;2.8048;1.9778;1.5828;1.2017;0.93088;0.90912 +;-;-;-;-;-;-;-;-;- + 354 + 1 1.832 85199.3 1.0 2835 3387 6217 DOHH2_400M_050219_2,6224 DOHH2_400M_050219_2,6224,YVEINGEKY True True YVEINGEKY 33.174845 557.77403563261 1821427.0 6217.0 ENSG00000149418|ENST00000278742|ST14;;ENST00000524718.5_1_11:130059967-130066600:+|nuORF 6.818142573038737 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6225 33.189 800.0 296280.0 25 0 15965.0 + -1 YLLEKSRAI 9 183 546.7110140610102 1091.4074751888204 2 546.7119018435478 MULTI CID FTMS 0 0 0 6217 172618.34375 1.0 0 0.0 8 Carbamidomethyl (C) _SSSSC(Carbamidomethyl (C))LSSDY_ ENSG00000100345|ENST00000216181|MYH9;ENSG00000133392|ENST00000300036|MYH11;ENSG00000105357|ENST00000642316|MYH14;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133392|P35749-3|MYH11 24.020572477871973 0.4289996903560794 2 SSDY 4 -1 39.746 0.0 0.0 3.6417 0.0 0.0 0.0 636.2314330295991 636.2314330295991 8.722038979465047 0.0 0.0 0.0 0 0.4090970050269639 0.7958800173440752 0.6549471895720985 0.0 SSDY 3.6417 + + 1401 + 1 1.832 181237.7 0.7200000286102295 2836 3387 6217 DOHH2_400M_050219_2,6225 DOHH2_400M_050219_2,6225,SSSSCLSSDY False False YLLEKSRAI 33.188677 546.711901843548 583320.0625 6217.0 ENSG00000100345|ENST00000216181|MYH9;;ENSG00000133392|ENST00000300036|MYH11;;ENSG00000105357|ENST00000642316|MYH14;;nc|ENSG00000133392|P35749-4|MYH11;;nc|ENSG00000100345|P35579-2|MYH9;;nc|ENSG00000105357|Q7Z406-4|MYH14;;nc|ENSG00000105357|Q7Z406-5|MYH14;;nc|ENSG00000105357|Q7Z406-6|MYH14;;nc|ENSG00000133392|P35749-2|MYH11;;nc|ENSG00000105357|Q7Z406|MYH14;;nc|ENSG00000133392|P35749-3|MYH11 3.2301061153411865 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6226 33.192 198.0 219790.0 25 0 15079.0 + 8471 TRMSTVSEL 9 90 512.2617414924918 0 512.2617675662041 PEAK CID FTMS 0 0 0 6217 142267.359375 1.0 0 0.0 9 Unmodified _ESWLTFQI_ ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C;ENST00000493027.5_1_1:45205556-45221765:+|nuORF 16.942295170755138 0.4635191396245973 2 ESV 3 6 18.188 0.0 0.0 1.7787 0.0 0.0 131.101533666821 573.2445772760374 704.3461109428583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 ESV 1.7787 - 20 + 1 1.832 38909.8 1.0 2837 3387 6217 DOHH2_400M_050219_2,6226 DOHH2_400M_050219_2,6226,ESWLTFQI False False TRMSTVSEL 33.192477 512.261767566204 1245031.0 6217.0 ENSG00000142945|ENST00000372224|KIF2C;;nc|ENSG00000142945|Q99661-2|KIF2C;;ENST00000493027.5_1_1:45205556-45221765:+|nuORF 1.8077768087387085 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6227 33.2 424.0 265750.0 25 0 15182.0 + 38187 TPRHIIVRF 9 153 380.2316407758008 1137.6730929276025 3 380.2326537966728 MULTI CID FTMS 0 0 0 6217 131408.703125 1.0 0 0.0 10 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 19.62595529434964 0.305431704817896 2 TPRH{I|L}{I|L}RV{M(Oxidation (M))|F} 9 2 + 54.835 0.0 0.0 4.82 4.82 71.187 0.0 0.0 0.0 16.478174818886373 0.1772876696043113 0.1772876696043113 0.1772876696043113 0 0.8494850021680094 0.0 0.0 0.0 TPRH{I|L}{I|L}RV{M(Oxidation (M))|F};TPRH{I|L}{I|L}{M(Oxidation (M))|F}[RV];TP[VG]H{I|L}{I|L}RV{M(Oxidation (M))|F};TP[VG]H{I|L}{I|L}{M(Oxidation (M))|F}[RV] 4.82;4.8044;4.0106;3.995 -;-;-;- 117 + 1 1.832 95808.2 1.0 2838 3387 6217 DOHH2_400M_050219_2,6227 DOHH2_400M_050219_2,6227,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6228 33.21 595.0 274640.0 25 0 54884.0 + 22558 NPRIRVESL 9 141 542.3155665411865 1082.616580149173 2 542.3158447146416 MULTI CID FTMS 0 0 0 6217 122188.7578125 0.9804196416151758 -1 0.1236534118652343 11 Unmodified _LPWQIVQIS_ ENSG00000109606|ENST00000336812|DHX15 15.847184025352805 0.4077185912009129 2 VRR[WH]S{I|L} 7 8 20.903 0.0 0.0 1.9308 0.0 0.0 130.10325254498792 0.0 130.10325254498792 0.0 8.13920194820404 0.0 0.0 0 0.5 0.0 0.8862887849978724 0.0 VRR[WH]S{I|L} 1.9308 - 314 + 1 1.832 129307.4 1.0 2839 3387 6217 DOHH2_400M_050219_2,6228 DOHH2_400M_050219_2,6228,LPWQIVQIS False False NPRIRVESL 33.210437 542.315844714642 949076.9375 6217.0 ENSG00000109606|ENST00000336812|DHX15 3.799703598022461 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6229 33.225 800.0 59367.0 25 0 8127.8 + -1 YSQSQGDSEYYDY 13 73 802.8055614501473 1603.5965699670944 2 802.8045532107353 MULTI CID FTMS 0 0 0 6217 77837.578125 1.0 0 0.0 12 4 Carbamidomethyl (C) _FC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))ILFYFD_ nc|ENSG00000121774|Q07666-3|KHDRBS1;ENST00000307714.12_1_1:32503693-32508222:+|nuORF;ENSG00000121774|ENST00000327300|KHDRBS1;nc|ENSG00000121774|Q07666-2|KHDRBS1 0.0 0.8751479354844584 2 YDY 3 -1 30.93 0.0 0.0 1.9288 0.0 0.0 1144.4319714336943 0.0 1144.4319714336943 0.0 16.8753063169585 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 YDY 1.9288 - 89 + 1 1.832 38403.7 0.5199999809265137 2840 3387 6217 DOHH2_400M_050219_2,6229 DOHH2_400M_050219_2,6229,FCCCCILFYFD False False YSQSQGDSEYYDY 33.22546 802.804553210735 782304.4375 6217.0 nc|ENSG00000121774|Q07666-3|KHDRBS1;;ENST00000307714.12_1_1:32503693-32508222:+|nuORF;;ENSG00000121774|ENST00000327300|KHDRBS1;;nc|ENSG00000121774|Q07666-2|KHDRBS1 3.487404743830363 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6230 33.229 186.0 418380.0 25 0 34657.0 + 28693 PVRSAPRTSL 10 107 361.8797906106352 0 361.8801147341728 PEAK CID FTMS 0 0 0 6217 174463.109375 1.0 0 0.0 13 Unmodified _PVRSAPRTSL_ REV__ENST00000531840.1_1_11:2416360-2416819:+|nuORF 18.1463463914782 0.3130158145628772 2 {I|L}Y 2 -1 8.5835 0.0 0.0 1.1893 0.0 0.0 360.5165564636547 82.06685815982655 442.5834146234813 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y 1.1893 - 16 + 1 1.832 68504.8 1.0 2841 3387 6217 DOHH2_400M_050219_2,6230 DOHH2_400M_050219_2,6230,PVRSAPRTSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6231 33.231 93.0 1379500.0 25 0 371210.0 + 6618 EARPRPLSL 9 94 519.8062234185985 1037.597893903997 2 519.8065673708916 MULTI CID FTMS 0 0 0 6217 162102.90625 0.0780369303994428 -4 0.4598503112792969 14 Unmodified _EARPRPLSL_ ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1 26.268140514670165 0.1969607489560049 2 {I|L}EN{I|L} 4 8 51.458 0.0 0.0 4.9594 0.0 0.0 0.0 565.3070162408811 565.3070162408811 33.23145724778165 0.0 0.0 0.0 0 0.805462187404089 1.154901959985743 0.3807196863200844 0.0 {I|L}EN{I|L} 4.9594 - 103 + 1 1.832 103790.4 1.0 2842 3387 6217 DOHH2_400M_050219_2,6231 DOHH2_400M_050219_2,6231,EARPRPLSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6232 33.235 209.0 322380.0 25 0 21958.0 + 273 ADHLANSW 8 110 457.2115721416844 912.4085913501688 2 457.2121459841728 MULTI CID FTMS 0 0 0 6217 156378.0625 0.859529828871203 -1 0.1236534118652343 15 Unmodified _ADHLANSW_ ENSG00000175221|ENST00000325464|MED16;nc|ENSG00000175221|Q9Y2X0-2|MED16;nc|ENSG00000175221|Q9Y2X0-3|MED16;nc|ENSG00000175221|Q9Y2X0-4|MED16;nc|ENSG00000175221|Q9Y2X0-5|MED16 21.74664581756881 0.5868176546531598 2 [YQ]NA{I|L}{[SA]|[TG]}{M(Oxidation (M))|F} 8 6 + 23.906 0.0 0.0 2.62 2.62 70.969 0.0 0.0 0.0 5.651712939895042 1.8163014026405409 1.8163014026405409 4.943868066579707 0 0.4247425010840047 0.0 0.3494850021680094 0.0 [YQ]NA{I|L}{[SA]|[TG]}{M(Oxidation (M))|F};[H{I|L}]{[DA]|[EG]}ANSW;[{I|L}A][HD]ANSW;[YQ]GGA{I|L}{[SA]|[TG]}{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}[R{M(Oxidation (M))|F}]N{[WS]|[C(Carbamidomethyl (C)){I|L}]};[H{I|L}]{[DA]|[EG]}AGGSW;[{I|L}A][HD]AGGSW;[NP][QP]ANSW;[C(Carbamidomethyl (C))H]A[RP]SW;{[CT]|[{M(Oxidation (M))|F}G]}[R{M(Oxidation (M))|F}]GG{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.62;2.0782;1.8756;1.6049;1.2631;1.0631;0.86046;0.69281;0.24685;0.24051 -;-;-;-;-;-;-;-;-;- 143 + 1 1.832 56731.5 1.0 2843 3387 6217 DOHH2_400M_050219_2,6232 DOHH2_400M_050219_2,6232,ADHLANSW False True ADHLANSW 33.235055 457.212145984173 1160583.375 6217.0 nc|ENSG00000175221|Q9Y2X0-3|MED16;;nc|ENSG00000175221|Q9Y2X0-5|MED16;;ENSG00000175221|ENST00000325464|MED16;;nc|ENSG00000175221|Q9Y2X0-4|MED16;;nc|ENSG00000175221|Q9Y2X0-2|MED16 5.268360614776611 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6233 33.243 474.0 121410.0 25 0 7889.6 + -1 SMYGHSRLY 9 101 565.2591281016571 0 565.2588378787041 PEAK CID FTMS 0 0 0 6217 146360.125 1.0 0 0.0 16 Oxidation (M) _SM(Oxidation (M))YGHSRLY_ REV__ENSG00000177150|ENST00000651643|FAM210A 22.736283301280096 0.1762661025464585 2 R{I|L} 2 -1 17.831 0.0 0.0 1.58 0.0 0.0 678.2457209476516 178.05140100650627 856.2971219541579 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 R{I|L} 1.58 + + 30 + 1 1.832 51868.0 1.0 2844 3387 6217 DOHH2_400M_050219_2,6233 DOHH2_400M_050219_2,6233,SMYGHSRLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6235 33.249 152.0 459080.0 25 0 93841.0 + 6827 EEARRLLGY 9 83 553.8016735862839 1105.5887942393676 2 553.8030273318291 MULTI CID FTMS 0 0 0 6234 160629.375 1.0 0 0.0 1 Unmodified _EEARRLLGY_ ENSG00000240682|ENST00000393295|ISY1;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;nc|ENSG00000240682|Q9ULR0-2|ISY1 11.640296217721598 0.521594087909532 2 EE 2 7 27.167 0.0 0.0 2.4572 0.0 0.0 0.0 844.4795101802285 844.4795101802285 10.46765560293629 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 + EE 2.4572 + + 37 + 1 1.832 57807.2 1.0 2845 3388 6234 DOHH2_400M_050219_2,6235 DOHH2_400M_050219_2,6235,EEARRLLGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6236 33.263 800.0 162180.0 25 0 9862.5 + 681 AEMPGNLQHY 10 157 580.2628070612802 1158.5110611893604 2 580.2635375857353 MULTI CID FTMS 0 0 0 6234 38189.56640625 0.2597934105755282 2 -0.0808830261230468 2 Unmodified _AEMPGNLQHY_ ENSG00000122674|ENST00000325974|CCZ1;ENSG00000146574|ENST00000316731|CCZ1B 29.081581746732265 0.3152867722954398 2 {[CP]|[EA]}MPYY{I|L}SW 9 5 + 33.847 0.0 0.0 2.9216 2.9216 71.291 0.0 0.0 0.0 17.46597200531113 5.5192435809753775 5.5192435809753775 4.77121254719663 0 0.8494850021680094 0.0 0.0 0.0 {[CP]|[EA]}MPYY{I|L}SW;{[CP]|[EA]}{I|L}DYY{I|L}SW;{[CP]|[EA]}MPYY{I|L}C(Carbamidomethyl (C)){I|L};{[CP]|[EA]}MPG[RH][QA]Y;{[CP]|[EA]}{I|L}DYY{I|L}C(Carbamidomethyl (C)){I|L};{[CP]|[EA]}{I|L}QA{[MS]|[{M(Oxidation (M))|F}A]}HSW;{[CP]|[EA]}{I|L}DG[RH][QA]Y;{[CP]|[EA]}MPYY{I|L}[CG]{I|L};{[CP]|[EA]}MPG{[HG]|PP}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W;{[CP]|[EA]}MP[HT][MT]{I|L}E 2.9216;2.5098;2.4414;2.1026;2.0296;1.9043;1.6907;1.6466;1.6071;1.5828 -;-;-;-;-;-;-;-;-;- 1107 + 1 1.832 99681.7 0.6000000238418579 2846 3388 6234 DOHH2_400M_050219_2,6236 DOHH2_400M_050219_2,6236,AEMPGNLQHY False True AEMPGNLQHY 33.262818 580.263537585735 1053267.625 6234.0 ENSG00000146574|ENST00000316731|CCZ1B;;ENSG00000122674|ENST00000325974|CCZ1 7.715236345926921 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6237 33.265 101.0 478890.0 25 0 60053.0 + 8375 ESDSEDNSSES 11 75 593.2069261472204 1184.3992993612408 2 593.2075073122978 MULTI CID FTMS 0 0 0 6234 424368.625 0.8390041723476381 -2 0.2178306579589843 3 Unmodified _ESDSEDNSSES_ REV__ENSG00000181555|ENST00000409792|SETD2;REV__nc|ENSG00000181555|Q9BYW2-2|SETD2;REV__nc|ENSG00000181555|Q9BYW2-3|SETD2 21.53697664764585 0.586507868110548 2 {M(Oxidation (M))|F}KY 3 -1 20.802 0.0 0.0 1.7563 0.0 0.0 728.1634422829189 0.0 728.1634422829189 0.0 3.0803717656404217 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}KY 1.7563 - 46 + 1 1.832 40330.1 1.0 2847 3388 6234 DOHH2_400M_050219_2,6237 DOHH2_400M_050219_2,6237,ESDSEDNSSES False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6238 33.279 800.0 263750.0 25 0 26148.0 + 32934 SELEYDMKKY 10 146 653.3054640695577 1304.5963752059154 2 653.3058959841728 MULTI CID FTMS 0 0 0 6234 177431.90625 0.4063689716128941 -2 0.2178306579589843 4 Unmodified _SELEYDMKKY_ ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF 118.20947048124656 0.0007427166967034 2 {[ES]|[DT]|[{I|L}C]}{I|L}EYDMKKY 10 0 {[ES]|[DT]|[{I|L}C]} + + 79.678 7.7288 3.5769 6.1075 6.1075 59.72 0.0 0.0 0.0 0.0 38.2331348114792 0.0 0.0 0 1.8494850021680087 0.0 1.110924374808178 0.6989700043360187 + + {[ES]|[DT]|[{I|L}C]}{I|L}EYDMKKY 6.1075 + + 3673 + 1 1.832 156936.2 0.7599999904632568 2848 3388 6234 DOHH2_400M_050219_2,6238 DOHH2_400M_050219_2,6238,SELEYDMKKY True True SELEYDMKKY 33.278837 653.305895984173 4301039.125 6234.0 ENSG00000151503|ENST00000534548|NCAPD3;;ENST00000525964.6_1_11:134022841-134052943:-|nuORF 8.817495346069336 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6239 33.283 245.0 430480.0 25 0 33055.0 + 32935 SELEYDMKKY 10 90 435.8724901389469 1304.5956410170409 3 435.8722717165947 MULTI CID FTMS 0 0 0 6234 171935.375 0.3282699464791658 -3 0.3835029602050781 5 Unmodified _SELEYDMKKY_ ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF 33.82136114134338 0.222812100547209 2 {[ES]|[DT]|[{I|L}C]}{I|L}EYDMKKY 10 0 {[ES]|[DT]|[{I|L}C]} + + 56.936 4.5376 2.1001 4.3643 4.3643 52.971 0.0 0.0 0.0 0.0 13.17171433275236 0.0 0.0 0 0.7614393726401688 0.0 0.9247425010840048 0.0 + + {[ES]|[DT]|[{I|L}C]}{I|L}EYDMKKY 4.3643 + + 566 + 1 1.832 92449.2 1.0 2849 3388 6234 DOHH2_400M_050219_2,6239 DOHH2_400M_050219_2,6239,SELEYDMKKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6240 33.293 531.0 209320.0 25 0 10701.0 + -1 SETDMVRQI 9 137 547.7629375801935 1093.5113222271868 2 547.7612182497978 MULTI CID FTMS 0 0 0 6234 119098.6171875 0.8033478591211827 -2 0.2178306579589843 6 Oxidation (M) _SETDM(Oxidation (M))VRQI_ ENSG00000149823|ENST00000279281|VPS51 32.78568957990786 0.1150597335874693 2 {[ES]|[DT]|[{I|L}C]}TD{M(Oxidation (M))|F}VRQ{I|L} 9 -1 + 36.498 0.0 0.0 3.3377 3.3377 75.556 0.0 0.0 0.0 20.30017272447801 6.884249941294065 6.884249941294065 8.137790978814316 0 0.805462187404089 0.0 0.0 0.2614393726401688 {[ES]|[DT]|[{I|L}C]}TD{M(Oxidation (M))|F}VRQ{I|L};{[ES]|[DT]|[{I|L}C]}TD{M(Oxidation (M))|F}[PA]KS{I|L};{[ES]|[DT]|[{I|L}C]}TD[WE]KS{I|L};{[ES]|[DT]|[{I|L}C]}TD{M(Oxidation (M))|F}[PA]K{I|L}S;{[ES]|[DT]|[{I|L}C]}TDD{[TV]|[{I|L}S]}KS{I|L};{[ES]|[DT]|[{I|L}C]}TD{M(Oxidation (M))|F}VR[AG]{I|L};{[ES]|[DT]|[{I|L}C]}TD[WE]K{I|L}S;{[ES]|[DT]|[{I|L}C]}TDD{[TV]|[{I|L}S]}K{I|L}S;{[ES]|[DT]|[{I|L}C]}T[QT][C(Carbamidomethyl (C))K]Q{I|L};{[ES]|[DT]|[{I|L}C]}T[QT]A[NS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.3377;2.5935;2.4325;2.3818;2.3182;2.2565;2.2208;2.1065;0.89516;0.77117 +;-;-;-;-;-;-;-;-;- + 386 + 1 1.832 91017.6 1.0 2850 3388 6234 DOHH2_400M_050219_2,6240 DOHH2_400M_050219_2,6240,SETDMVRQI False False SETDMVRQI 33.29276 547.761218249798 3208382.0 6234.0 ENSG00000149823|ENST00000279281|VPS51 7.067089557647705 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6242 33.298 28.0 1648500.0 25 0 185370.0 + 18449 KYFDEHYEY 9 69 647.2748017189234 1292.5350505046467 2 647.2751342654228 MULTI CID FTMS 0 0 0 6241 1606901.375 0.024560777961403 4 -0.1399002075195312 1 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 80.6760300276096 0.0173529540220427 2 [YE]HAYRYEY 9 5 + 82.942 0.0 0.0 6.417 6.417 79.109 0.0 0.0 0.0 1.478174818886373 1.478174818886373 1.478174818886373 1.478174818886373 0 0.7059771852360797 1.5228787452803376 0.8252574989159953 0.3807196863200844 [YE]HAYRYEY;KY{M(Oxidation (M))|F}DE[QA]TEY;KY{M(Oxidation (M))|F}DEHYEY;[YE]HAY[VG]YEY;KY{M(Oxidation (M))|F}YY{[MS]|[{M(Oxidation (M))|F}A]}EY;[YE]H[Y{M(Oxidation (M))|F}]DKEY;[YK]{M(Oxidation (M))|F}DEHYEY;{[YC]|[HE]}YAYRYEY;{[YC]|[HE]}D{M(Oxidation (M))|F}YKYEY;KY{M(Oxidation (M))|F}D[NP]{[MS]|[{M(Oxidation (M))|F}A]}EY 6.417;6.3026;6.1017;5.41;5.407;5.2762;5.2535;4.9753;4.918;4.7903 -;-;+;-;-;-;+;-;-;- + 1010 1 1.84 41777.4 1.0 2851 3389 6241 DOHH2_400M_050219_2,6242 DOHH2_400M_050219_2,6242,KYFDEHYEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6243 33.299 30.0 1688500.0 25 0 173720.0 + 33121 SETDMVRQI 9 69 539.7636034168122 1077.5126539004243 2 539.7635986208916 MULTI CID FTMS 0 0 0 6241 1551260.5 0.8331128497086676 1 -0.0315170288085937 2 Unmodified _SETDMVRQI_ ENSG00000149823|ENST00000279281|VPS51 74.92900055777586 0.0191935851694334 2 {[ES]|[DT]|[{I|L}C]}TDMV 6 3 39.724 0.0 0.0 3.6866 0.0 0.0 0.0 412.2320158401741 412.2320158401741 27.73387189888816 0.0 0.0 0.0 0 1.1307196863200843 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}TDMV 3.6866 + + 66 + 1 1.84 44079.1 1.0 2852 3389 6241 DOHH2_400M_050219_2,6243 DOHH2_400M_050219_2,6243,SETDMVRQI True True SETDMVRQI 33.298788 539.763598620892 8550620.0 6241.0 ENSG00000149823|ENST00000279281|VPS51 3.697289903958639 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6244 33.3 60.0 1012700.0 25 0 223350.0 + 18453 KYFDEHYEY 9 76 431.85241170784207 1292.5354057237262 3 431.8522521853447 MULTI CID FTMS 0 0 0 6241 717715.0625 0.025154090101693 4 -0.1399002075195312 3 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 13.042465956692816 0.4836390050082244 2 {[YC]|[HE]}D{M(Oxidation (M))|F}YK 6 6 29.456 0.0 0.0 2.2789 0.0 0.0 0.0 470.1560293321424 470.1560293321424 1.0744777526815774 0.0 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 {[YC]|[HE]}D{M(Oxidation (M))|F}YK 2.2789 - 189 1 1.84 56556.7 1.0 2853 3389 6241 DOHH2_400M_050219_2,6244 DOHH2_400M_050219_2,6244,KYFDEHYEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6245 33.305 235.0 464130.0 25 0 26931.0 + 7038 EELEKLQQY 9 132 590.2983154373026 1178.582077941405 2 590.2982055544853 MULTI CID FTMS 0 0 0 6241 342993.3125 0.1021193870365246 -5 0.5117149353027344 4 Unmodified _EELEKLQQY_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 118.89474601620944 0.0019711750475752 2 EE{I|L}E[K{I|L}]QQY 9 0 + 77.7 0.0 0.0 6.5926 6.5926 89.376 0.0 0.0 0.0 32.80008452963798 12.509103626137318 12.509103626137318 9.208187539523747 0 1.329689690656103 1.6989700043360187 0.0 2.1549471895720984 + + EE{I|L}E[K{I|L}]QQY;EE{I|L}E[K{I|L}][AG]QY;EE{I|L}E[K{I|L}]Q[AG]Y;EE{I|L}[TP]QK[TA]Y;[DP]PQ[K{I|L}]E{I|L}[HC];{[HG]|PP}DQ[K{I|L}]E{I|L}[HC];[AG]{I|L}KE{I|L}EEQY;EE[TP]{I|L}QK[TA]Y;{[QN]|[E{I|L}]|[KN]}KQ{I|L}EEQY;{[QN]|[E{I|L}]|[KN]}K{I|L}QEEQY 6.5926;5.8114;5.451;4.5177;4.2846;3.7127;3.5163;3.4814;3.4635;3.227 +;-;-;-;-;-;-;-;-;- + 2012 + 1 1.84 88231.3 1.0 2854 3389 6241 DOHH2_400M_050219_2,6245 DOHH2_400M_050219_2,6245,EELEKLQQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6246 33.308 177.0 535710.0 25 0 50940.0 + 5467 DLRIKSQEL 9 100 367.88120547994 1100.62178704002 3 367.8803588747978 MULTI CID FTMS 0 0 0 6241 256951.640625 0.6452656571506599 -2 0.1435432434082031 5 Unmodified _DLRIKSQEL_ ENSG00000197102|ENST00000360184|DYNC1H1 13.90604991867851 0.4602628045680013 2 [R{I|L}]D{I|L}K 5 6 16.427 0.0 0.0 1.4925 0.0 0.0 0.0 472.2096526008201 472.2096526008201 0.9421249706470292 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 [R{I|L}]D{I|L}K 1.4925 - 115 1 1.84 80347.4 1.0 2855 3389 6241 DOHH2_400M_050219_2,6246 DOHH2_400M_050219_2,6246,DLRIKSQEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6247 33.315 401.0 288220.0 25 0 26582.0 + 5620 DPCIYKFYEFY 11 79 744.3309771640446 1486.6474013948891 2 744.3314086794853 MULTI CID FTMS 0 0 0 6241 207486.09375 0.2816486321691274 4 -0.1399002075195312 6 Unmodified _DPCIYKFYEFY_ REV__ENSG00000163840|ENST00000296161|DTX3L 5.731851221503515 0.8481046878870278 2 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 79.289 0.0 0.0 5.3334 5.3334 82.071 0.0 0.0 0.0 7.491949135003935 11.448658907276368 7.491949135003935 7.491949135003935 0 0.8935078169319297 0.8239087409443188 0.0 1.5629529932484498 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQ[{M(Oxidation (M))|F}E]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQ[{M(Oxidation (M))|F}E]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQ[AG]NA{M(Oxidation (M))|F}Y 5.3334;4.8294;4.8263;4.7374;4.7342;4.7231;4.7231;4.7231;4.4245;4.2175 -;-;-;-;-;-;-;-;-;- 1744 1 1.84 87914.6 1.0 2856 3389 6241 DOHH2_400M_050219_2,6247 DOHH2_400M_050219_2,6247,DPCIYKFYEFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6248 33.324 508.0 261930.0 25 0 15556.0 + 729 AEPYRPIQY 9 122 568.790456570581 1135.566360207962 2 568.7900878787041 MULTI CID FTMS 0 0 0 6241 146059.25 0.20749646262601 -5 0.5117149353027344 7 Unmodified _AEPYRPIQY_ ENSG00000144283|ENST00000389759|PKP4;nc|ENSG00000144283|Q99569-2|PKP4 65.23502041540118 0.0231836506122253 2 {[CP]|[EA]}PYR[{I|L}P]QY 9 0 + 50.089 0.0 0.0 4.4109 4.4109 82.505 0.0 0.0 0.0 7.19782205064881 14.09256854528806 7.19782205064881 10.268024924119665 0 1.1549471895720984 0.0 0.0 1.6989700043360187 + + {[CP]|[EA]}PYR[{I|L}P]QY;{[CP]|[EA]}YPR[{I|L}P]QY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R[{I|L}P]Q{[CP]|[EA]}Y;{[CP]|[EA]}PYR[{I|L}P][AG]Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R[{I|L}P]{[CP]|[EA]}QY;{[CP]|[EA]}PYR[{I|L}P]SG{M(Oxidation (M))|F};{[CP]|[EA]}P[DP][{I|L}P]R{[QN]|[E{I|L}]|[KN]};{[CP]|[EA]}YPR[{I|L}P]SG{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R[Q{I|L}]P{[CP]|[EA]}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R{[QN]|[E{I|L}]|[KN]}YP[QA] 4.4109;3.5067;3.2872;3.1597;3.0923;2.966;2.5224;2.5021;2.4515;2.4268 +;-;-;-;-;-;-;-;-;- + 356 + 1 1.84 101345.2 1.0 2857 3389 6241 DOHH2_400M_050219_2,6248 DOHH2_400M_050219_2,6248,AEPYRPIQY True True AEPYRPIQY 33.324274 568.790087878704 10144606.0 6241.0 ENSG00000144283|ENST00000389759|PKP4;;nc|ENSG00000144283|Q99569-2|PKP4 6.410516421000163 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6250 33.329 61.0 806310.0 25 0 60534.0 + 11198 GENLKTEQW 9 82 552.769739161065 1103.52492538893 2 552.7697021365166 MULTI CID FTMS 0 0 0 6249 636658.25 0.9254810437565408 -1 0.0315170288085937 1 Unmodified _GENLKTEQW_ ENSG00000104973|ENST00000312865|MED25;nc|ENSG00000104973|Q71SY5-4|MED25;nc|ENSG00000104973|Q71SY5-5|MED25;nc|ENSG00000104973|Q71SY5-6|MED25 51.629811660486645 0.0367964933207742 2 {[DA]|[EG]}N{I|L} 4 5 45.406 0.0 0.0 4.1146 0.0 0.0 0.0 687.3123873346311 687.3123873346311 18.293037728310253 0.0 0.0 0.0 0 1.274227503252014 1.5228787452803376 0.0 0.4247425010840047 + {[DA]|[EG]}N{I|L} 4.1146 + + 374 + 1 1.84 43256.8 1.0 2858 3390 6249 DOHH2_400M_050219_2,6250 DOHH2_400M_050219_2,6250,GENLKTEQW True True GENLKTEQW 33.32908 552.769702136517 3397484.75 6249.0 nc|ENSG00000104973|Q71SY5-5|MED25;;ENSG00000104973|ENST00000312865|MED25;;nc|ENSG00000104973|Q71SY5-4|MED25;;nc|ENSG00000104973|Q71SY5-6|MED25 6.401532014211019 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6251 33.343 800.0 60344.0 25 0 19249.0 -1 0 47 1182.8180442538903 3545.432303361871 3 1183.151904284954 MULTI CID FTMS 0 0 0 6249 119295.546875 0.7994718086976171 1 -0.0603256225585937 2 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.19715 0.0 0.0 1912.681523187846 1482.6740783708078 3395.3556015586537 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19715 - 3 + 1 1.84 49556.6 0.5099999904632568 2859 3390 6249 DOHH2_400M_050219_2,6251 DOHH2_400M_050219_2,6251, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6252 33.346 157.0 433600.0 25 0 25931.0 + 45306 YSEVYPGQQY 10 103 617.2743654279292 1232.5341779226585 2 617.2746459841728 MULTI CID FTMS 0 0 0 6249 337284.375 0.990160775556677 1 -0.0603256225585937 3 Unmodified _YSEVYPGQQY_ ENSG00000122515|ENST00000309315|ZMIZ2;nc|ENSG00000122515|Q8NF64-2|ZMIZ2;nc|ENSG00000122515|Q8NF64-3|ZMIZ2 57.24910588100465 0.0438022649904578 2 YVE[MT] 5 8 33.561 0.0 0.0 2.7229 0.0 0.0 591.2611199166021 0.0 591.2611199166021 0.0 15.602102477187415 0.0 0.0 0 1.0 0.0 1.66944517631652 0.0 YVE[MT] 2.7229 - 559 + 1 1.84 57963.3 1.0 2860 3390 6249 DOHH2_400M_050219_2,6252 DOHH2_400M_050219_2,6252,YSEVYPGQQY True True YSEVYPGQQY 33.346063 617.274645984173 1835939.625 6249.0 nc|ENSG00000122515|Q8NF64-3|ZMIZ2;;ENSG00000122515|ENST00000309315|ZMIZ2;;nc|ENSG00000122515|Q8NF64-2|ZMIZ2 10.863272984822592 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6253 33.351 249.0 335570.0 25 0 60033.0 + 7063 EELKGQML 8 105 474.2478530064493 946.4811530796984 2 474.2476989626884 MULTI CID FTMS 0 0 0 6249 131757.203125 1.0 0 0.0 4 Unmodified _EELKGQML_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1 24.67388899826682 0.525179942228231 2 [YV]ER[NG]P{I|L} 8 6 + 34.43 0.0 0.0 3.6377 3.6377 79.304 0.0 0.0 0.0 19.4812969097282 13.187587626244124 13.187587626244124 9.262137858390812 0 0.3054621874040891 0.0 0.5 0.0 [YV]ER[NG]P{I|L};[YV]E[VG][NG]P{I|L};[YV]E{[QG]|[NA]}AAP{I|L};[YV]E[RH]M{I|L};{[QG]|[NA]}[{I|L}T]RE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[K{I|L}]E{[QG]|[NA]}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV][WQ]AAP{I|L};[EP][KT][QT]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QG]|[NA]}[{I|L}T][VG]E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV][RH]E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.6377;2.6591;2.341;1.8156;1.7886;1.3385;1.1283;0.8957;0.80999;0.78862 -;-;-;-;-;-;-;-;-;- 113 + 1 1.84 67090.1 1.0 2861 3390 6249 DOHH2_400M_050219_2,6253 DOHH2_400M_050219_2,6253,EELKGQML False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6254 33.36 521.0 220080.0 25 0 22947.0 + 29101 QEPDFEEKRF 10 137 442.2102804479406 1323.609011944022 3 442.2094604372978 MULTI CID FTMS 0 0 0 6249 100420.171875 0.4946083923392349 5 -0.2201042175292968 5 Unmodified _QEPDFEEKRF_ ENSG00000158545|ENST00000301011|ZC3H18 32.61649475675321 0.2358628368497494 2 [QT][{I|L}V]HE{M(Oxidation (M))|F}DP 9 8 46.99 0.0 0.0 3.5502 0.0 0.0 0.0 254.07761184159577 254.07761184159577 35.73118066909476 0.0 0.0 0.0 0 0.2302046884880938 0.0 1.5044321917401078 0.7302046884880938 [QT][{I|L}V]HE{M(Oxidation (M))|F}DP 3.5502 - 601 1 1.84 96127.9 1.0 2862 3390 6249 DOHH2_400M_050219_2,6254 DOHH2_400M_050219_2,6254,QEPDFEEKRF False True QEPDFEEKRF 33.359844 442.209460437298 2155464.25 6249.0 ENSG00000158545|ENST00000301011|ZC3H18 7.72570276260376 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6255 33.374 800.0 213630.0 25 0 16799.0 + 41643 VPPQKLQAL 9 153 497.3081549463309 992.6017569594618 2 497.3082153201103 MULTI CID FTMS 0 0 0 6249 88864.8125 0.7649481761500471 -5 0.464385986328125 6 Unmodified _VPPQKLQAL_ ENSG00000148943|ENST00000278193|LIN7C 23.1484247019978 0.2366544122328345 2 VP 2 7 43.315 0.0 0.0 4.3638 0.0 0.0 0.0 793.4578210123574 793.4578210123574 19.62643677897418 0.0 0.0 0.0 0 0.5356668758921829 1.6989700043360187 0.0 0.0 + VP 4.3638 + + 853 + 1 1.84 133234.8 0.4699999988079071 2863 3390 6249 DOHH2_400M_050219_2,6255 DOHH2_400M_050219_2,6255,VPPQKLQAL False True VPPQKLQAL 33.373661 497.30821532011 1492041.125 6249.0 ENSG00000148943|ENST00000278193|LIN7C 2.631484270095825 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6256 33.382 476.0 182630.0 25 0 11875.0 + 32466 SAHEKLYSL 9 133 524.2765867517048 1046.5386205702096 2 524.2780029177666 MULTI CID FTMS 0 0 0 6249 94336.2421875 0.8544709419607706 -4 0.2987136840820312 7 Unmodified _SAHEKLYSL_ ENSG00000141564|ENST00000306801|RPTOR;ENST00000577161.5_1_17:78519375-78883449:+|nuORF 63.22749603027936 0.0242951379232427 2 SAHE[{I|L}P]{[HG]|PP}S{I|L} 10 3 + 57.221 0.0 0.0 5.4677 5.4677 86.779 0.0 0.0 0.0 34.21835643169331 3.460696996448576 3.460696996448576 10.428418131619992 0 1.6861818737241734 1.0969100130080565 0.3807196863200844 0.0 SAHE[{I|L}P]{[HG]|PP}S{I|L};SAH[KA]K{[QD]|[EN]|[WG]|[KD]|[RS]}Y;SA{I|L}Q[RP]VNY;SAH[KA]K{[YD]|[{M(Oxidation (M))|F}M]}Q;SA{I|L}Q{[CA]|SS}[WR]{I|L};SAH[KA]KC[R{M(Oxidation (M))|F}];SAH[KA]K[HD][PG];SAHV{M(Oxidation (M))|F}[{I|L}A][R{M(Oxidation (M))|F}];SAH[KA]KCV{[CT]|[{M(Oxidation (M))|F}G]};SA{I|L}Q{[CA]|SS}{[RE]|[WV]}G{I|L} 5.4677;4.4712;3.6461;3.6351;3.194;2.9848;2.9032;2.8415;2.746;2.6187 -;-;-;-;-;-;-;-;-;- 955 + 1 1.84 70171.1 1.0 2864 3390 6249 DOHH2_400M_050219_2,6256 DOHH2_400M_050219_2,6256,SAHEKLYSL True True SAHEKLYSL 33.382096 524.278002917767 793107.6875 6249.0 ENSG00000141564|ENST00000306801|RPTOR;;ENST00000577161.5_1_17:78519375-78883449:+|nuORF 6.458222071329753 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6257 33.385 122.0 405200.0 25 0 36724.0 + + 42156 KENGGKFSF 9 86 507.2547895440717 1012.4950261549434 2 507.2533141970634 MULTI CID FTMS 0 0 0 6249 206881.46875 0.8373331923487087 -1 0.0315170288085937 8 Unmodified _VSANKNFSF_ ENSG00000102699|ENST00000381989|PARP4 34.40172386719151 0.1061884637610825 2 WYR[WR]{M(Oxidation (M))|F} 6 -1 + 27.625 0.0 0.0 2.7284 2.7284 77.497 0.0 0.0 0.0 9.041068762088996 1.1193685428313316 1.1193685428313316 9.420080530223132 0 0.0 0.0 0.0 0.0 WYR[WR]{M(Oxidation (M))|F};WY[VG][WR]{M(Oxidation (M))|F};KE[{M(Oxidation (M))|F}T][WR]{M(Oxidation (M))|F};[VS]A[{M(Oxidation (M))|F}V][KT]D{M(Oxidation (M))|F};KEN{[SA]|[TG]}[HQ]S{I|L};{[VA]|[{I|L}G]}W{M(Oxidation (M))|F}[KT]D{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}K{M(Oxidation (M))|F}[KT]D{M(Oxidation (M))|F} 2.7284;1.798;1.6119;1.4997;0.15058;0.085299;0.031612 -;-;-;-;-;-;- 202 + 1 1.84 46799.4 1.0 2865 3390 6249 DOHH2_400M_050219_2,6257 DOHH2_400M_050219_2,6257,VSANKNFSF False False KENGGKFSF 33.384613 507.253314197063 1414980.25 6249.0 ENSG00000102699|ENST00000381989|PARP4 3.081932624181112 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6259 33.393 215.0 418360.0 25 0 49226.0 + 19763 LGQLRQAL 8 95 449.7769435194385 0 449.7771179080009 PEAK CID FTMS 0 0 0 6258 212953.359375 1.0 0 0.0 1 Unmodified _LGQLRQAL_ REV__ENSG00000143375|ENST00000271636|CGN 10.183394434864962 0.5394990767616434 2 T 1 -1 10.969 0.0 0.0 1.2221 0.0 0.0 126.11472580665198 667.3508394830686 793.4655652897206 0.0 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 T 1.2221 - 13 + 1 1.849 78014.0 1.0 2866 3391 6258 DOHH2_400M_050219_2,6259 DOHH2_400M_050219_2,6259,LGQLRQAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6260 33.397 262.0 227800.0 25 0 37654.0 -1 0 92 500.2680897131078 499.26081324650784 1 500.2692443728447 MULTI CID FTMS 0 0 0 6258 119087.1015625 0.8095622585689918 3 -0.0869064331054687 2 2 {NN|[MP]|[D{I|L}]|[EV]}RP 4 -1 + 19.71 0.0 0.0 3.9479 3.9479 83.035 0.0 0.0 0.0 5.642040441009044 8.290101080705572 5.642040441009044 19.71008436253157 0 0.0044321917401078 1.2218487496163564 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}RP 3.9479 - 38 1 1.849 48255.9 1.0 2867 3391 6258 DOHH2_400M_050219_2,6260 DOHH2_400M_050219_2,6260, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6261 33.399 68.0 1009200.0 25 0 185860.0 + 8388 ESEDPDYYQY 10 82 654.7489205402829 1307.4832881473658 2 654.7489501833916 MULTI CID FTMS 0 0 0 6258 728606.3125 0.0774056100095656 -5 0.359039306640625 3 Unmodified _ESEDPDYYQY_ ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I 61.357469665136826 0.0330252915653943 2 [DP]DD{[ET]|[MV]}YY[YQ] 10 5 + 39.517 0.0 0.0 3.0224 3.0224 67.86 0.0 0.0 0.0 3.463767487353998 7.269987279362624 3.463767487353998 1.9316423496005648 0 0.3494850021680094 0.0 1.5387254899964358 0.0 [DP]DD{[ET]|[MV]}YY[YQ];[DP]YEDSEY[YQ];[DP]DQ{[C(Carbamidomethyl (C))G]|[NC]}YY[YQ];YYE{[C(Carbamidomethyl (C))G]|[NC]}YY[YQ];[DP]YDESEY[YQ];[DP]NE{[C(Carbamidomethyl (C))G]|[NC]}YY[YQ];[YE]Y{[C(Carbamidomethyl (C))G]|[NC]}YY[YQ];[DP]Y[C(Carbamidomethyl (C))H]YY[YQ];[{M(Oxidation (M))|F}V]EEDSEY[YQ];[DP]DD[YT]EY[YQ] 3.0224;2.8746;2.8346;2.7575;2.6444;2.6043;2.517;2.5137;2.4142;2.4097 -;-;-;-;-;-;-;-;-;- 671 1 1.849 55846.2 1.0 2868 3391 6258 DOHH2_400M_050219_2,6261 DOHH2_400M_050219_2,6261,ESEDPDYYQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6262 33.402 135.0 369510.0 25 0 23860.0 + 25509 NEMQPNGKVF 10 86 582.2794739935729 1162.5443950539457 2 582.2793456912041 MULTI CID FTMS 0 0 0 6258 277350.0 0.4849597560775699 -4 0.2353858947753906 4 Unmodified _NEMQPNGKVF_ ENSG00000068366|ENST00000672401|ACSL4;nc|ENSG00000068366|O60488|ACSL4 39.94969957227396 0.1580982266129622 2 {[QD]|[EN]|[WG]|[KD]|[RS]}MQ 4 6 28.06 0.0 0.0 2.4136 0.0 0.0 0.0 657.3393528999019 657.3393528999019 10.893943874995172 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.6549471895720984 + {[QD]|[EN]|[WG]|[KD]|[RS]}MQ 2.4136 + + 125 1 1.849 45029.2 1.0 2869 3391 6258 DOHH2_400M_050219_2,6262 DOHH2_400M_050219_2,6262,NEMQPNGKVF False True NEMQPNGKVF 33.40179 582.279345691204 6489874.5 6258.0 ENSG00000068366|ENST00000672401|ACSL4;;nc|ENSG00000068366|O60488|ACSL4 6.276858806610107 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6263 33.406 220.0 250660.0 25 0 19811.0 + 24340 MEKYENPGF 9 90 557.7475731710592 1113.4805934089184 2 557.7479125857353 MULTI CID FTMS 0 0 0 6258 135145.03125 0.7247979405649871 -3 0.1412086486816406 5 Unmodified _MEKYENPGF_ ENST00000219400.7_1_16:81009831-81009861:-|nuORF 24.020572477871973 0.2255576514309169 2 [YV]G 3 7 28.468 0.0 0.0 2.5567 0.0 0.0 0.0 791.304106219303 791.304106219303 5.372249758351799 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [YV]G 2.5567 - 190 1 1.849 48083.8 1.0 2870 3391 6258 DOHH2_400M_050219_2,6263 DOHH2_400M_050219_2,6263,MEKYENPGF False True MEKYENPGF 33.405957 557.747912585735 1014640.6875 6258.0 ENST00000219400.7_1_16:81009831-81009861:-|nuORF 5.724325974782308 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6264 33.42 800.0 166480.0 25 0 7787.6 + 29126 QESSYIATQY 10 173 595.2726144051113 1188.5306758770223 2 595.2725707888603 MULTI CID FTMS 0 0 0 6258 107154.90625 0.3022564711374506 -4 0.2353858947753906 6 Unmodified _QESSYIATQY_ ENSG00000143815|ENST00000272163|LBR 96.93554129104106 0.0088365951652222 2 G{I|L}QD{I|L}ATQY 9 5 53.526 0.0 0.0 4.5035 0.0 0.0 181.0638922850288 0.0 181.0638922850288 0.0 32.42839170790056 0.0 0.0 0 1.0682503180159344 0.0 1.024227503252014 1.0283773187068794 G{I|L}QD{I|L}ATQY 4.5035 - 1592 + 1 1.849 98819.9 0.6000000238418579 2871 3391 6258 DOHH2_400M_050219_2,6264 DOHH2_400M_050219_2,6264,QESSYIATQY True True QESSYIATQY 33.4198 595.2722 1916512.25 6258.0 ENSG00000143815|ENST00000272163|LBR 5.320106824239095 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6265 33.424 216.0 440840.0 25 0 114220.0 + 5458 DLRCDKII 8 105 488.2681743358156 0 488.2675048708916 PEAK CID FTMS 0 0 0 6258 164328.078125 0.7621921978659337 3 -0.0869064331054687 7 Unmodified _DLRCDKII_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 18.13498045792455 0.4501116112875982 2 G 1 -1 9.2917 0.0 0.0 0.95347 0.0 0.0 487.2620215352352 427.22117029361567 914.4831918288507 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 G 0.95347 - 55 + 1 1.849 76289.2 1.0 2872 3391 6258 DOHH2_400M_050219_2,6265 DOHH2_400M_050219_2,6265,DLRCDKII False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6267 33.429 36.0 1110100.0 25 0 149020.0 + 35216 SSDPASQLSY 10 69 527.7378814488542 1053.4612099645085 2 527.7382079958916 MULTI CID FTMS 0 0 0 6266 1215222.625 0.2232468185348726 5 -0.341094970703125 1 Unmodified _SSDPASQLSY_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000536066.1_1_12:2967806-2973707:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 70.33199760932243 0.018925923965799 2 {[C(Carbamidomethyl (C))E]|[WC]}PASQ{I|L}SY 9 3 + 53.399 0.0 0.0 5.0689 5.0689 74.227 0.0 0.0 0.0 1.3818017138288212 16.478174818886373 1.3818017138288212 1.3818017138288212 0 1.1822333069283657 0.0 1.3494850021680094 0.0 {[C(Carbamidomethyl (C))E]|[WC]}PASQ{I|L}SY;{[CA]|SS}DPASQ{I|L}SY;[AG]SAP{I|L}S{[DS]|[MA]|[CV]|TT}SY;[PA]SQ{I|L}S{[DS]|[MA]|[CV]|TT}SY;{[QS]|[NT]}AP{I|L}S{[DS]|[MA]|[CV]|TT}SY;[AG]SAP{[C(Carbamidomethyl (C))E]|[WC]}{I|L}SY;[PA]SQ{[C(Carbamidomethyl (C))E]|[WC]}{I|L}SY;{[QS]|[NT]}AP{[C(Carbamidomethyl (C))E]|[WC]}{I|L}SY;[AG]S{I|L}APS{[DS]|[MA]|[CV]|TT}SY;{[QS]|[NT]}{I|L}APS{[DS]|[MA]|[CV]|TT}SY 5.0689;4.9378;4.445;4.3863;4.3277;4.224;4.1694;4.1108;4.0878;3.9705 -;+;-;-;-;-;-;-;-;- + 239 1 1.849 36636.5 1.0 2873 3392 6266 DOHH2_400M_050219_2,6267 DOHH2_400M_050219_2,6267,SSDPASQLSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6268 33.433 216.0 337820.0 25 0 38975.0 -1 0 87 450.23606152120055 449.22878505460056 1 450.2367126345634 MULTI CID FTMS 0 0 0 6266 136103.3125 0.497519317928948 -2 0.0995445251464843 2 2 M 1 -1 14.604 0.0 0.0 3.2509 0.0 0.0 300.17758984151305 0.0 300.17758984151305 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 M 3.2509 - 22 + 1 1.849 60309.8 1.0 2874 3392 6266 DOHH2_400M_050219_2,6268 DOHH2_400M_050219_2,6268, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6270 33.438 130.0 808070.0 25 0 132790.0 + 36854 TELPKAEKW 9 109 367.8693539114613 0 367.8693420290947 PEAK CID FTMS 0 0 0 6269 190633.1875 0.7700913409030903 1 -0.038848876953125 1 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 17.11289562659939 0.230679707888486 2 K 1 8 6.9897 0.0 0.0 0.95263 0.0 0.0 73.36497627819752 529.2411708412052 602.6061471194027 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.95263 + + 51 + 1 1.849 90786.9 1.0 2875 3393 6269 DOHH2_400M_050219_2,6270 DOHH2_400M_050219_2,6270,TELPKAEKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6271 33.442 227.0 293130.0 25 0 34401.0 -1 0 91 483.2373994950419 482.23012302844194 1 483.2380248904228 MULTI CID FTMS 0 0 0 6269 191178.90625 0.7847444113789976 1 -0.038848876953125 2 2 Y 1 -1 12.764 0.0 0.0 2.6469 0.0 0.0 301.1559175614482 0.0 301.1559175614482 0.0 5.316934894321968 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.6469 - 29 + 1 1.849 54273.1 1.0 2876 3393 6269 DOHH2_400M_050219_2,6271 DOHH2_400M_050219_2,6271, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6272 33.45 418.0 149260.0 25 0 13303.0 + 44005 YIDQGRNPQLY 11 96 683.8410341544649 1365.6675153757296 2 683.8413574099541 MULTI CID FTMS 0 0 0 6269 174364.71875 0.8217492745205002 1 -0.038848876953125 3 Unmodified _YIDQGRNPQLY_ ENSG00000133398|ENST00000255764|MED10;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 42.312485326615175 0.1767732348921932 2 [Y{I|L}]DK[{M(Oxidation (M))|F}E]{I|L}Y{I|L}Y 10 6 + 74.258 0.0 0.0 5.4375 5.4375 82.905 0.0 0.0 0.0 25.76483730104272 62.663800089887545 25.76483730104272 8.010973820016389 0 2.1861818737241734 2.0 0.0 0.0 [Y{I|L}]DK[{M(Oxidation (M))|F}E]{I|L}Y{I|L}Y;[Y{I|L}]D[YG]A{I|L}{I|L}Y{I|L}Y;[Y{I|L}]Y[DG]A{I|L}{I|L}Y{I|L}Y;[Y{I|L}]Y{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}Y;[Y{I|L}]DK[Y{M(Oxidation (M))|F}]{I|L}E{I|L}Y;[Y{I|L}]Y{I|L}MY[QP]{I|L}Y;[Y{I|L}]Y[RH]N[QP]{I|L}Y;[Y{I|L}]Y{I|L}[YN]{I|L}E{I|L}Y;[QP]VNGWN{I|L}Y{I|L}Y;[NP]{I|L}NGWN{I|L}Y{I|L}Y 5.4375;4.8509;4.2485;4.0281;3.8782;3.7876;3.6857;2.9096;2.6438;2.5859 -;-;-;-;-;-;-;-;-;- 1057 1 1.849 50348.9 1.0 2877 3393 6269 DOHH2_400M_050219_2,6272 DOHH2_400M_050219_2,6272,YIDQGRNPQLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6273 33.453 156.0 549280.0 25 0 65809.0 + 43373 WQDERTDY 8 101 556.737919737307 1111.461286541414 2 556.7347289919853 MULTI CID FTMS 0 0 0 6269 107098.2265625 0.0763662174164741 8 -0.8173332214355469 4 Unmodified _WQDERTDY_ REV__ENSG00000120696|ENST00000379483|KBTBD7 39.957323273325 0.2350051964751539 2 {[YC]|[HE]}Y{M(Oxidation (M))|F}DKY 7 -1 50.971 0.0 0.0 4.586 0.0 0.0 0.0 126.02137392689124 126.02137392689124 33.80416900112664 0.0 0.0 0.0 0 0.8539171939081173 1.3010299956639813 1.1445990182825423 0.3494850021680094 {[YC]|[HE]}Y{M(Oxidation (M))|F}DKY 4.586 - 888 1 1.849 69912.3 1.0 2878 3393 6269 DOHH2_400M_050219_2,6273 DOHH2_400M_050219_2,6273,WQDERTDY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6274 33.467 800.0 123020.0 25 0 9261.2 + 25886 NLIKKTVL 8 139 464.8133416531948 927.6121303731896 2 464.8129760622978 MULTI CID FTMS 0 0 0 6269 103801.828125 0.850677715004039 1 -0.038848876953125 5 Unmodified _NLIKKTVL_ ENSG00000163811|ENST00000407426|WDR43;ENST00000466067.1_1_2:29147965-29158512:+|nuORF 25.399314129420983 0.5099049743284904 2 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K[KT]V{I|L} 8 0 + 44.051 0.0 0.0 4.7489 4.7489 87.682 0.0 0.0 0.0 29.447143884496683 4.001831290772699 4.001831290772699 44.05123765425856 0 0.7742275032520141 2.0 0.4247425010840047 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K[KT]V{I|L} 4.7489 + + 128 + 1 1.849 81115.5 0.4799999892711639 2879 3393 6269 DOHH2_400M_050219_2,6274 DOHH2_400M_050219_2,6274,NLIKKTVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6275 33.472 272.0 136970.0 25 0 12009.0 + 7247 EESGARINI 9 84 494.7568251908381 987.4990974484764 2 494.7573425173759 MULTI CID FTMS 0 0 0 6269 97620.234375 0.753099499871956 1 -0.038848876953125 6 Unmodified _EESGARINI_ ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;ENSG00000197111|ENST00000546463|PCBP2;ENST00000498121.1_1_21:47289198-47321357:+|nuORF;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 20.453626601364224 0.2830276176381075 2 EESP 4 6 36.682 0.0 0.0 3.7147 0.0 0.0 0.0 542.2929171197874 542.2929171197874 23.187587626244124 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 EESP 3.7147 - 28 + 1 1.849 33968.7 1.0 2880 3393 6269 DOHH2_400M_050219_2,6275 DOHH2_400M_050219_2,6275,EESGARINI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6277 33.479 162.0 406660.0 25 0 114350.0 + 15880 ISQRMPVL 8 68 472.2727239866656 0 472.2727538943291 PEAK CID FTMS 0 0 0 6276 150414.625 0.8137595992461351 -7 0.3222923278808594 1 Unmodified _ISQRMPVL_ REV__ENSG00000113522|ENST00000378823|RAD50;REV__nc|ENSG00000113522|Q92878-2|RAD50;REV__nc|ENSG00000113522|Q92878-3|RAD50 10.183394434864962 0.5394990767616434 2 V 1 -1 4.6041 0.0 0.0 0.48848 0.0 0.0 330.16970226844984 510.2692325661476 840.4389348345974 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.48848 + + 12 + 1 1.858 59251.5 1.0 2881 3394 6276 DOHH2_400M_050219_2,6277 DOHH2_400M_050219_2,6277,ISQRMPVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6278 33.492 791.0 154600.0 25 0 7191.8 + 8429 ESKVQLNSI 9 182 509.28158839742986 1016.5486238616596 2 509.2848083376884 MULTI CID FTMS 0 0 0 6276 52523.94921875 0.1233916569038381 -6 0.2281150817871093 2 Unmodified _ESKVQLNSI_ ENST00000445995.2_1_9:98056039-98057089:+|nuORF 15.847184025352805 0.4077185912009129 2 N[HK]Q[KT]VY 8 7 + 33.963 0.0 0.0 3.341 3.341 69.692 0.0 0.0 0.0 2.686364666612878 8.750612633917001 2.686364666612878 2.8123468415207498 0 0.3807196863200844 0.0 0.7302046884880937 0.0 N[HK]Q[KT]VY;N[HK]K[QT]VY;N[HK]Q[YK]S{I|L};N[HK]K{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GS{I|L};N[HK]K[{I|L}T]NY;N[HK]K[YQ]S{I|L};[TP]D[VP]KV[YV];[DP]T[VP]KV[YV];N[HK]K[{I|L}T]YN;N[HK]K{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KE 3.341;3.0643;2.4802;2.4191;2.2708;2.2035;2.038;1.9354;1.4087;1.2704 -;-;-;-;-;-;-;-;-;- 898 + 1 1.858 98303.8 1.0 2882 3394 6276 DOHH2_400M_050219_2,6278 DOHH2_400M_050219_2,6278,ESKVQLNSI False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6279 33.496 225.0 541170.0 25 0 24857.0 + 5130 DIHHKVLSL 9 129 531.3087866864607 1060.6030204397214 2 531.3089477419853 MULTI CID FTMS 0 0 0 6276 238003.9375 0.3910974425546621 -1 0.038848876953125 3 Unmodified _DIHHKVLSL_ ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2 67.08073823543168 0.0222274355215578 2 {NN|[MP]|[D{I|L}]|[EV]}HHKV{I|L}S{I|L} 9 0 + 72.635 0.0 0.0 6.8484 6.8484 84.781 0.0 0.0 0.0 4.917665879116626 4.917665879116626 4.917665879116626 4.917665879116626 0 2.1549471895720984 1.6989700043360187 0.805462187404089 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}HHKV{I|L}S{I|L};D{I|L}H[{I|L}V][HK]S{I|L};[H{I|L}]DHKV{I|L}S{I|L};[HK]V{I|L}HD{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]{M(Oxidation (M))|F}V{I|L}S{I|L};[{I|L}V]HKHD{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV][{I|L}V]{M(Oxidation (M))|F}S{I|L};[HK]V{I|L}HS{I|L}D{I|L};{[TV]|[{I|L}S]}[QA][KC]V{I|L}S{I|L};[HK]{[YC]|[HE]}VV{I|L}S{I|L} 6.8484;6.3848;4.9021;4.392;4.0384;3.8841;3.8063;3.6794;3.1969;3.1821 +;-;-;-;-;-;-;-;-;- + 799 1 1.858 91312.7 1.0 2883 3394 6276 DOHH2_400M_050219_2,6279 DOHH2_400M_050219_2,6279,DIHHKVLSL True True DIHHKVLSL 33.496483 531.308947741985 7152777.0 6276.0 ENSG00000138757|ENST00000359707|G3BP2;;nc|ENSG00000138757|Q9UN86-2|G3BP2 5.182262261708577 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6280 33.51 800.0 273490.0 25 0 29458.0 + 8381 ESEAENEDMNY 11 171 665.7397342272415 1329.4649155212828 2 665.7398559451103 MULTI CID FTMS 0 0 0 6276 203774.65625 0.5438435394659619 -1 0.038848876953125 4 Unmodified _ESEAENEDMNY_ REV__ENSG00000135052|ENST00000388712|GOLM1;REV__nc|ENSG00000135052|Q8NBJ4-2|GOLM1 34.93206674587334 0.2904649469012649 2 ESEDPD{M(Oxidation (M))|F}[NS]QY 11 -1 + 61.821 0.0 0.0 4.65 4.65 84.086 0.0 0.0 0.0 9.242439673349132 12.85193161807269 9.242439673349132 12.525749891599531 0 0.8494850021680094 1.3010299956639813 0.0 1.7856668758921828 ESEDPD{M(Oxidation (M))|F}[NS]QY;ESEPDD{M(Oxidation (M))|F}[NS]QY;[DP]DD[HD]YYQY;ESEDPD{M(Oxidation (M))|F}[NS][AG]Y;ESEDPD{M(Oxidation (M))|F}[NS]YQ;[DP]DD[HD]YY[AG]Y;[DP]DD[HD]YQYY;ESEPDD{M(Oxidation (M))|F}[NS][AG]Y;ESEDYE{[DS]|[MA]|[CV]|TT}[DN]Q;ESEPDD{M(Oxidation (M))|F}[NS]YQ 4.65;3.7079;3.6639;3.6439;3.5208;2.9746;2.7746;2.7018;2.5821;2.5786 -;-;-;-;-;-;-;-;-;- 5513 + 1 1.858 161595.3 0.8299999833106995 2884 3394 6276 DOHH2_400M_050219_2,6280 DOHH2_400M_050219_2,6280,ESEAENEDMNY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6281 33.524 800.0 316060.0 25 0 25595.0 + 8396 ESEEEEDDDSY 11 161 673.7230660622074 1345.4315791912147 2 673.7220947146416 MULTI CID FTMS 0 0 0 6276 184975.59375 0.4490120166766254 -1 0.038848876953125 5 Unmodified _ESEEEEDDDSY_ REV__ENSG00000048649|ENST00000308488|RSF1;REV__nc|ENSG00000048649|Q96T23-2|RSF1;REV__nc|ENSG00000048649|Q96T23-3|RSF1 27.628801355627647 0.4434699450731472 2 [DP]DDMMD{[C(Carbamidomethyl (C))G]|[NC]}QY 11 -1 + 50.041 0.0 0.0 3.7193 3.7193 77.484 0.0 0.0 0.0 7.695304776737046 15.753578689480925 7.695304776737046 9.128498242810998 0 0.7302046884880937 0.721246399047171 0.9119543704721594 0.4247425010840047 [DP]DDMMD{[C(Carbamidomethyl (C))G]|[NC]}QY;[DP]DDMMD{[C(Carbamidomethyl (C))G]|[NC]}[AG]Y;[DP]DDMMY[C(Carbamidomethyl (C))H]Y;E{[{M(Oxidation (M))|F}D]|MM}SYM[DC]SSY;[DP]DDMMD[YE]SE;[DP]DDMMDAYC(Carbamidomethyl (C))N;[DP]DDMMY{[DA]|[EG]}C(Carbamidomethyl (C))N;[DP]DD[WC(Carbamidomethyl (C))]GY[CS]E;[DP]DD[WC(Carbamidomethyl (C))][YC(Carbamidomethyl (C))]SE;[HM]S[DC]MY[C(Carbamidomethyl (C))H]Y 3.7193;3.0408;2.4081;2.3297;1.6227;1.5198;1.3191;1.315;1.3065;1.1931 -;-;-;-;-;-;-;-;-;- 1442 1 1.858 185022.4 0.7900000214576721 2885 3394 6276 DOHH2_400M_050219_2,6281 DOHH2_400M_050219_2,6281,ESEEEEDDDSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6282 33.528 191.0 503990.0 25 0 27625.0 + 25848 NLDSARFRY 9 107 381.19689265877696 1140.5688485765309 3 381.1970397830009 MULTI CID FTMS 0 0 0 6276 174381.0625 0.9429111640433496 -1 0.038848876953125 6 Unmodified _NLDSARFRY_ ENSG00000111716|ENST00000350669|LDHB;ENSG00000134333|ENST00000422447|LDHA;ENSG00000166796|ENST00000541669|LDHC;ENSG00000166800|ENST00000280706|LDHAL6A;ENST00000398295.3_1_2:85004811-85005102:-|nuORF;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA 12.174745833636583 0.5071271664557081 2 N{I|L}DY 4 5 52.423 0.0 0.0 4.5962 0.0 0.0 0.0 632.3282523499732 632.3282523499732 38.44335023848103 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.0 N{I|L}DY 4.5962 - 248 + 1 1.858 80117.5 1.0 2886 3394 6276 DOHH2_400M_050219_2,6282 DOHH2_400M_050219_2,6282,NLDSARFRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6283 33.542 800.0 156450.0 25 0 8516.9 -1 KMYQEEIQEWY 11 119 781.8478786814181 1561.6812044296362 2 782.3480712771416 MULTI CID FTMS 0 0 0 6276 109471.0390625 0.7698615399018607 -1 0.038848876953125 7 Oxidation (M) _KM(Oxidation (M))YQEEIQEWY_ ENSG00000186815|ENST00000335509|TPCN1;ENST00000551127.5_1_12:113730719-113733878:+|nuORF;ENST00000552077.5_1_12:113726380-113733878:+|nuORF;nc|ENSG00000186815|Q9ULQ1-3|TPCN1 5.296884461304476 0.8501568894076437 2 {[QG]|[NA]}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 70.913 0.0 0.0 4.5408 4.5408 76.911 0.0 0.0 0.0 6.988445474847339 53.8743463507102 6.988445474847339 5.576384178116939 0 1.0629529932484498 0.958607314841775 0.3252574989159953 2.004432191740108 {[QG]|[NA]}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAMQ[YG]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAMA[YN]QQNA{M(Oxidation (M))|F}Y;{[NV]|[RG]}D[YT]EAQQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAMAG[YG]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AMQ[YG]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EAQ[AG]NA{M(Oxidation (M))|F}Y 4.5408;4.1837;4.151;4.0758;4.0397;4.0011;3.9622;3.9599;3.9599;3.9599 -;-;-;-;-;-;-;-;-;- 2009 1 1.858 86128.9 0.5899999737739563 2887 3394 6276 DOHH2_400M_050219_2,6283 DOHH2_400M_050219_2,6283,KMYQEEIQEWY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6284 33.544 66.0 892780.0 25 0 52416.0 + 13077 HEAEVLKQL 9 93 533.7983052037952 0 533.7983886599541 PEAK CID FTMS 0 0 0 6276 591635.0625 1.0 0 0.0 8 Unmodified _HEAEVLKQL_ ENSG00000117632|ENST00000455785|STMN1;ENST00000465604.1_1_1:26227509-26228203:-|nuORF;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;nc|ENSG00000117632|P16949-2|STMN1 66.45667989310934 0.0141522131504411 2 QK{I|L}VEAE 7 8 57.65 0.0 0.0 5.4102 0.0 0.0 131.0976162464944 134.03614221744377 265.1337584639382 0.0 0.0 0.0 0.0 0 1.339136830878453 0.0 1.1307196863200843 0.0 QK{I|L}VEAE 5.4102 - 179 + 1 1.858 49623.1 1.0 2888 3394 6276 DOHH2_400M_050219_2,6284 DOHH2_400M_050219_2,6284,HEAEVLKQL True True HEAEVLKQL 33.544437 533.798388659954 3261277.5 6276.0 ENST00000465604.1_1_1:26227509-26228203:-|nuORF;;ENST00000485226.1_1_1:26227942-26230296:-|nuORF;;ENSG00000117632|ENST00000455785|STMN1;;nc|ENSG00000117632|P16949-2|STMN1 5.820438464482625 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6286 33.551 105.0 766720.0 25 0 145000.0 + 6619 EARPRPLSL 9 103 519.8062234185985 1037.597893903997 2 519.8063842654228 MULTI CID FTMS 0 0 0 6285 380870.375 0.1833523878914706 4 -0.5080223083496094 1 Unmodified _EARPRPLSL_ ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1 16.149105407346934 0.3995459350917656 2 CS{I|L} 3 7 18.382 0.0 0.0 1.7716 0.0 0.0 716.4540168061438 0.0 716.4540168061438 0.0 4.402214790055535 0.0 0.0 0 0.3807196863200844 0.0 0.2614393726401688 0.0 CS{I|L} 1.7716 - 59 + 1 1.86 67813.7 1.0 2889 3395 6285 DOHH2_400M_050219_2,6286 DOHH2_400M_050219_2,6286,EARPRPLSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6287 33.556 282.0 270870.0 25 0 24028.0 + -1 YGDKHITLY 9 108 554.7811565491904 1107.5477601651808 2 555.2842895388603 MULTI CID FTMS 0 0 0 6285 134708.359375 0.5558529603290759 9 -1.0975723266601562 2 Oxidation (M) _ELQTTELKM(Oxidation (M))_ ENSG00000109111|ENST00000314616|SUPT6H 15.847184025352805 0.4077185912009129 2 [RH]EM{I|L}{M(Oxidation (M))|F}{I|L}Y 8 -1 + 37.332 0.0 0.0 3.3707 3.3707 74.826 0.0 0.0 0.0 20.430868667287992 14.904630595263413 14.904630595263413 6.989700043360188 0 0.0 0.0 0.4247425010840047 0.0 [RH]EM{I|L}{M(Oxidation (M))|F}{I|L}Y;[RH]E{I|L}M{M(Oxidation (M))|F}{I|L}Y;[RH]E{I|L}{M(Oxidation (M))|F}M{I|L}Y;[RH]T{I|L}{M(Oxidation (M))|F}[KS]GY;[RH]YDG[KG]{I|L}Y;[{I|L}T][HK]GDY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[RH]YPT[KS]GY;[RH]T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KG]{I|L}Y;[DP]Q{I|L}{M(Oxidation (M))|F}{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{I|L}T][HK]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.3707;2.7396;2.6147;1.9994;1.8659;1.707;1.544;1.532;1.4367;1.373 -;-;-;-;-;-;-;-;-;- 478 + 1 1.86 64222.2 1.0 2890 3395 6285 DOHH2_400M_050219_2,6287 DOHH2_400M_050219_2,6287,ELQTTELKM False False YGDKHITLY 33.55572 555.28428953886 1429421.125 6285.0 ENSG00000109111|ENST00000314616|SUPT6H 5.5629018147786455 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6288 33.559 180.0 489140.0 25 0 44477.0 + 19380 LERLEKNEL 9 115 381.8837350693042 0 381.8836242556572 PEAK CID FTMS 0 0 0 6285 307464.46875 1.0 0 0.0 3 Unmodified _LERLEKNEL_ REV__ENSG00000052723|ENST00000060969|SIKE1;REV__nc|ENSG00000052723|Q9BRV8-2|SIKE1 21.53697664764585 0.1871382778112851 2 K{I|L} 2 -1 7.9588 0.0 0.0 1.0448 0.0 0.0 140.35778888685223 377.1937113809636 517.5515002678159 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L} 1.0448 - 22 + 1 1.86 75965.1 1.0 2891 3395 6285 DOHH2_400M_050219_2,6288 DOHH2_400M_050219_2,6288,LERLEKNEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6289 33.563 195.0 370200.0 25 0 45465.0 + 45542 YVAFSSALY 9 112 510.75382696955694 0 510.7537414431572 PEAK CID FTMS 0 0 0 6285 252915.0625 0.1611936173614753 -1 0.0728721618652343 4 Unmodified _YVAFSSALY_ ENSG00000248746|ENST00000513398|ACTN3 53.57557251787612 0.0235668973483969 2 {I|L}STGTE 6 8 36.19 0.0 0.0 3.5498 0.0 0.0 181.07648831235764 247.12082849674064 428.1973168090983 0.0 0.0 0.0 0.0 0 1.0 0.0 1.3494850021680094 0.0 {I|L}STGTE 3.5498 - 414 + 1 1.86 56564.5 1.0 2892 3395 6285 DOHH2_400M_050219_2,6289 DOHH2_400M_050219_2,6289,YVAFSSALY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6290 33.567 232.0 309170.0 25 0 23214.0 + 16714 KETRGITDW 9 103 553.2837133431357 1104.5528737530713 2 553.2847167849541 MULTI CID FTMS 0 0 0 6285 238514.140625 1.0 0 0.0 5 Unmodified _KETRGITDW_ REV__ENST00000464646.1_1_6:5002375-5002459:-|nuORF 12.531546534597751 0.4974689918368763 2 YV{M(Oxidation (M))|F}AAM{I|L}KY 9 -1 + 92.172 0.0 0.0 8.3447 8.3447 64.854 0.0 0.0 0.0 79.40786231576038 14.973024840566469 14.973024840566469 0.0 0 0.8807196863200843 2.0 0.0 0.0 YV{M(Oxidation (M))|F}AAM{I|L}KY;VY{M(Oxidation (M))|F}AAM{I|L}KY;YV{M(Oxidation (M))|F}ATT{I|L}KY;VY{M(Oxidation (M))|F}ATT{I|L}KY;VY{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}KY;YV{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}KY;YV{M(Oxidation (M))|F}AAM[YK]{I|L};VY{M(Oxidation (M))|F}AAM[YK]{I|L};YV{M(Oxidation (M))|F}ATT[YK]{I|L};VY{M(Oxidation (M))|F}ATT[YK]{I|L} 8.3447;8.3447;7.7119;7.7119;6.3332;6.3332;5.8057;5.8057;5.1729;5.1729 -;-;-;-;-;-;-;-;-;- 394 + 1 1.86 63439.4 1.0 2893 3395 6285 DOHH2_400M_050219_2,6290 DOHH2_400M_050219_2,6290,KETRGITDW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6291 33.575 406.0 355220.0 25 0 57894.0 + -1 ILYPRPKSL 9 141 362.8935322482789 1447.5450231267157 4 362.8940917849541 MULTI CID FTMS 0 0 0 6285 210120.59375 1.0 0 0.0 6 Carbamidomethyl (C),Oxidation (M) _DFM(Oxidation (M))C(Carbamidomethyl (C))DEMERSL_ nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC;nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1-4|SCOC 1.3296431237094175 0.8688745925763601 2 {I|L}YPR[KP]S{I|L} 8 -1 26.831 0.0 0.0 1.8535 0.0 0.0 474.9678181727865 0.0 474.9678181727865 0.0 15.861847433774235 0.0 0.0 0 0.0 0.0 0.6203715150305281 0.3494850021680094 {I|L}YPR[KP]S{I|L} 1.8535 - 382 + 1 1.86 115925.6 1.0 2894 3395 6285 DOHH2_400M_050219_2,6291 DOHH2_400M_050219_2,6291,DFMCDEMERSL False False ILYPRPKSL 33.57456 362.894091784954 3269307.75 6285.0 nc|ENSG00000153130|Q9UIL1-3|SCOC;;nc|ENSG00000153130|Q9UIL1|SCOC;;nc|ENSG00000153130|Q9UIL1-2|SCOC;;nc|ENSG00000153130|Q9UIL1-4|SCOC 4.2853976885477705 3.0 False 9.0 True nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6292 33.588 800.0 262330.0 25 0 25181.0 + 711 AEPDESNARYF 11 135 649.7857756216746 1297.556998310149 2 649.7863036990166 MULTI CID FTMS 0 0 0 6285 183965.8125 0.6285540644671657 -1 0.0728721618652343 7 Unmodified _AEPDESNARYF_ ENSG00000177889|ENST00000318066|UBE2N;nc|ENSG00000276380|Q5JXB2|UBE2NL 67.83816525789305 0.0386695545555003 2 {[CP]|[EA]}PDESNARY{M(Oxidation (M))|F} 11 0 + 80.72 0.0 0.0 6.2209 6.2209 78.049 0.0 0.0 0.0 1.7829290416281791 1.0473535052001353 1.0473535052001353 1.0473535052001353 0 0.3807196863200844 0.0 1.1989700043360187 0.7614393726401688 + + {[CP]|[EA]}PDESNARY{M(Oxidation (M))|F};{[CP]|[EA]}PDESNAR{M(Oxidation (M))|F}Y;{[CP]|[EA]}PDESGGARY{M(Oxidation (M))|F};{[CP]|[EA]}PDESNA[VG]Y{M(Oxidation (M))|F};{[CP]|[EA]}PDESNA[VG]{M(Oxidation (M))|F}Y;{[CP]|[EA]}PDESGGAR{M(Oxidation (M))|F}Y;{[CP]|[EA]}PDESNA[YV]G{M(Oxidation (M))|F};{[CP]|[EA]}PDESGGA[VG]Y{M(Oxidation (M))|F};{[CP]|[EA]}PDESGGA[VG]{M(Oxidation (M))|F}Y;[DP]ESNKVY{M(Oxidation (M))|F}{[CP]|[EA]} 6.2209;6.1402;5.5174;5.5174;5.4367;5.4367;4.6999;4.2294;4.1486;4.055 +;-;-;-;-;-;-;-;-;- + 2138 + 1 1.86 156685.8 0.7799999713897705 2895 3395 6285 DOHH2_400M_050219_2,6292 DOHH2_400M_050219_2,6292,AEPDESNARYF True True AEPDESNARYF 33.588397 649.786303699017 1958898.625 6285.0 ENSG00000177889|ENST00000318066|UBE2N;;nc|ENSG00000276380|Q5JXB2|UBE2NL 7.829202969868978 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6293 33.602 800.0 318880.0 25 0 33323.0 28975 QDLPDCCFWAS 11 158 642.752792715422 1283.4910324976438 2 642.7527953982353 MULTI CID FTMS 0 0 0 6285 176301.09375 0.2567005124969184 -1 0.0728721618652343 8 Unmodified _QDLPDCCFWAS_ ENST00000421852.5_1_3:185207567-185207957:-|nuORF 32.78568957990786 0.3235288296534633 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}G{M(Oxidation (M))|F}GTQ 8 7 59.857 0.0 0.0 4.6636 0.0 0.0 0.0 434.07969080142817 434.07969080142817 40.74077076626935 0.0 0.0 0.0 0 1.325257498915995 0.0 1.113982988912431 1.3996498648046138 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}G{M(Oxidation (M))|F}GTQ 4.6636 - 742 + 1 1.86 187736.5 0.7699999809265137 2896 3395 6285 DOHH2_400M_050219_2,6293 DOHH2_400M_050219_2,6293,QDLPDCCFWAS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6294 33.613 635.0 177190.0 25 0 16814.0 + 22927 LSEAFHEEY 9 136 562.7480151321711 0 562.7478515505791 PEAK CID FTMS 0 0 0 6285 133140.203125 1.0 0 0.0 9 Unmodified _LSEAFHEEY_ ENST00000540438.5_1_11:113669964-113691034:-|nuORF;nc|ENSG00000048028|Q96RU2-2|USP28 30.63653989081413 0.1077493867305487 2 SEA{M(Oxidation (M))|F}Y{M(Oxidation (M))|F} 6 5 14.576 0.0 0.0 1.2974 0.0 0.0 113.08305641405737 263.0791109674438 376.1621673815012 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 SEA{M(Oxidation (M))|F}Y{M(Oxidation (M))|F} 1.2974 - 400 + 1 1.86 86131.2 1.0 2897 3395 6285 DOHH2_400M_050219_2,6294 DOHH2_400M_050219_2,6294,LSEAFHEEY True True LSEAFHEEY 33.613314 562.747851550579 636940.125 6285.0 nc|ENSG00000048028|Q96RU2-2|USP28;;ENST00000540438.5_1_11:113669964-113691034:-|nuORF 7.764455159505208 2.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_2 6295 33.627 800.0 99762.0 25 0 7480.4 -1 0 90 954.4319831281268 1906.849413323053 2 954.9345580935478 MULTI CID FTMS 0 0 0 6285 129830.7734375 0.9687243877364722 -1 0.0728721618652343 10 2 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 74.128 0.0 0.0 3.8874 3.8874 77.641 0.0 0.0 0.0 5.630230424989833 55.37314736501017 5.630230424989833 9.013902021140495 0 0.9247425010840048 0.0 0.0 0.6109243748081782 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQ[HV]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}[YG];[NP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQ[HV]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YG] 3.8874;3.4147;3.4147;3.4147;3.4147;2.881;2.848;2.6814;2.577;2.4674 -;-;-;-;-;-;-;-;-;- 479 1 1.86 59351.5 0.5699999928474426 2898 3395 6285 DOHH2_400M_050219_2,6295 DOHH2_400M_050219_2,6295, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6296 33.632 193.0 383460.0 25 0 43409.0 + 8605 EVCKQAQI 8 87 459.7372710332076 0 459.7370483279228 PEAK CID FTMS 0 0 0 6285 123059.5078125 0.6226513925206492 -1 0.0728721618652343 11 Unmodified _EVCKQAQI_ REV__ENSG00000113328|ENST00000340828|CCNG1;REV__nc|ENSG00000113328|P51959-2|CCNG1 13.50788311687929 0.5021269579892848 2 WK 2 -1 9.6309 0.0 0.0 1.0497 0.0 0.0 388.19523190840897 212.06789575748283 600.2631276658918 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 WK 1.0497 - 46 + 1 1.86 63900.0 1.0 2899 3395 6285 DOHH2_400M_050219_2,6296 DOHH2_400M_050219_2,6296,EVCKQAQI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6297 33.637 229.0 277050.0 25 0 22574.0 + 17746 KPYTKYVL 8 118 506.2978812830917 1010.5812096329836 2 506.2978698611259 MULTI CID FTMS 0 0 0 6285 112031.4296875 0.5349094635478436 -1 0.0728721618652343 12 Unmodified _KPYTKYVL_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 30.63653989081413 0.3996269429323407 2 KNPPRRM{I|L} 8 6 + 32.79 0.0 0.0 3.2446 3.2446 70.752 0.0 0.0 0.0 4.701388934837798 3.679767852945943 3.679767852945943 3.679767852945943 0 0.4247425010840047 0.0 0.0 0.5 KNPPRRM{I|L};KNPPRRP{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TKYK[{I|L}V];KNPP[{I|L}A][TA]S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TKKY[{I|L}V];KGGPPRRM{I|L};KNP[{I|L}A]P[TA]S{I|L};KGGPPRRP{M(Oxidation (M))|F};[YV]{[QV]|[N{I|L}]|[RA]|[KV]}KY[{I|L}V];[YV]{[QV]|[N{I|L}]|[RA]|[KV]}YK[{I|L}V] 3.2446;2.8805;2.7794;2.6033;2.4576;2.3281;2.065;1.964;1.8504;1.8504 -;-;-;-;-;-;-;-;-;- 645 + 1 1.86 53963.3 1.0 2900 3395 6285 DOHH2_400M_050219_2,6297 DOHH2_400M_050219_2,6297,KPYTKYVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6298 33.65 800.0 168230.0 25 0 22857.0 + -1 GCGCGGGG 8 140 681.2053846828069 680.1981082162068 1 681.2051269412041 MULTI CID FTMS 0 0 0 6285 100524.046875 0.6224907490511029 -1 0.0728721618652343 13 2 Carbamidomethyl (C) _GC(Carbamidomethyl (C))GC(Carbamidomethyl (C))GGGG_ REV__ENSG00000197651|ENST00000358859|CCER1 0.7936320650641473 0.8195151834710337 2 QY 2 -1 18.711 0.0 0.0 2.7509 0.0 0.0 371.0648686065954 0.0 371.0648686065954 0.0 3.02501280419058 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 QY 2.7509 - 134 + 1 1.86 99393.6 0.5099999904632568 2901 3395 6285 DOHH2_400M_050219_2,6298 DOHH2_400M_050219_2,6298,GCGCGGGG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6300 33.655 6.0 9117000.0 25 0 1761900.0 + 8389 ESEDPDYYQY 10 71 654.7489205402829 1307.4832881473658 2 654.7493163943291 MULTI CID FTMS 0 0 0 6299 9412836.0 1.0 0 0.0 1 Unmodified _ESEDPDYYQY_ ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I 52.268347100219714 0.0668375294751462 2 [DP]DD{[ET]|[MV]}YYQY 10 5 + 43.241 0.0 0.0 3.3072 3.3072 68.355 0.0 0.0 0.0 1.8322096673914243 10.452490459521968 1.8322096673914243 1.8322096673914243 0 0.8569758080123702 0.0 1.579689690656103 0.0 [DP]DD{[ET]|[MV]}YYQY;YYE{[C(Carbamidomethyl (C))G]|[NC]}YYQY;[DP]DQ{[C(Carbamidomethyl (C))G]|[NC]}YYQY;[DP]NE{[C(Carbamidomethyl (C))G]|[NC]}YYQY;[DP]Y[C(Carbamidomethyl (C))H]YYQY;[YE]Y{[C(Carbamidomethyl (C))G]|[NC]}YYQY;[DP]YED{[ES]|[DT]|[{I|L}C]}YQY;[DP]YY[C(Carbamidomethyl (C))H]YQY;[DP]YDE{[ES]|[DT]|[{I|L}C]}YQY;[DP]N[WC(Carbamidomethyl (C))]YYQY 3.3072;3.167;3.0584;2.789;2.7671;2.6716;2.4238;2.3847;2.2891;2.2709 -;-;-;-;-;-;-;-;-;- 387 1 1.86 46173.1 1.0 2902 3396 6299 DOHH2_400M_050219_2,6300 DOHH2_400M_050219_2,6300,ESEDPDYYQY True True ESEDPDYYQY 33.655169 654.749316394329 185888616.0 6299.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-5|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENSG00000263001|ENST00000573035|GTF2I 9.4025665918986 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6301 33.656 44.0 811390.0 25 0 74431.0 + 7039 EELEKLQQY 9 72 590.2983154373026 1178.582077941405 2 590.2984496951103 MULTI CID FTMS 0 0 0 6299 608875.125 0.1812803698520721 2 -0.2627220153808594 2 Unmodified _EELEKLQQY_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 46.020951573049366 0.0490941689151868 2 EE{I|L}E 4 5 29.798 0.0 0.0 2.5283 0.0 0.0 0.0 675.3468721979124 675.3468721979124 8.076804881451434 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 + EE{I|L}E 2.5283 + + 99 + 1 1.86 31848.6 1.0 2903 3396 6299 DOHH2_400M_050219_2,6301 DOHH2_400M_050219_2,6301,EELEKLQQY True True EELEKLQQY 33.656403 590.29844969511 34866904.0 6299.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 7.047555764516194 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6302 33.658 52.0 1028200.0 25 0 226370.0 + 14007 IADMGHLKY 9 76 524.2677926368467 1046.521032340493 2 524.2682372927666 MULTI CID FTMS 0 0 0 6299 1008735.1875 1.0 0 0.0 3 Unmodified _IADMGHLKY_ ENSG00000132646|ENST00000379143|PCNA 53.832793166522166 0.0319663582346103 2 {I|L}ADMGH{I|L}KY 9 0 + 86.596 0.0 0.0 8.2747 8.2747 94.527 0.0 0.0 0.0 27.545094889371526 13.46787486224656 13.46787486224656 11.54901959985743 0 1.424742501084005 2.0 0.4247425010840047 0.0 + + {I|L}ADMGH{I|L}KY;{I|L}AD[HS]T{I|L}KY;{I|L}AD[HS]{I|L}TKY;[{I|L}A]D[EP]RAY{I|L};[{I|L}A]D[EP]ARY{I|L};{I|L}WMGH{I|L}KY;[H{I|L}]GMDAKY{I|L};[{I|L}A]D[EP][VG]AY{I|L};[H{I|L}]GMDKAY{I|L};[{I|L}A][EP]DRAY{I|L} 8.2747;7.1711;6.3131;5.4306;4.9747;4.9328;4.8979;4.5508;4.492;4.285 +;-;-;-;-;-;-;-;-;- + 900 + 1 1.86 48181.6 1.0 2904 3396 6299 DOHH2_400M_050219_2,6302 DOHH2_400M_050219_2,6302,IADMGHLKY True True IADMGHLKY 33.657772 524.268237292767 4175035.25 6299.0 ENSG00000132646|ENST00000379143|PCNA;;chr20:5115356-5115449|41|12.51|0.78|4.01|-|2|None,PCNA|1 7.3998823165893555 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6303 33.66 77.0 2436300.0 25 0 504800.0 + 13291 HIRTCQKY 8 124 350.18182987570043 0 350.1822387576103 PEAK CID FTMS 0 0 0 6299 657900.5625 1.0 0 0.0 4 Unmodified _HIRTCQKY_ ENSG00000101695|ENST00000217740|RNF125;ENST00000583184.1_1_18:29598826-29691722:+|nuORF 11.640296217721598 0.5231213682848052 2 AD{I|L}M 4 8 16.67 0.0 0.0 2.3871 0.0 0.0 74.08141108285834 191.0578554742797 265.13926655713806 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 AD{I|L}M 2.3871 - 163 + 1 1.86 155111.2 1.0 2905 3396 6299 DOHH2_400M_050219_2,6303 DOHH2_400M_050219_2,6303,HIRTCQKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6304 33.662 139.0 415240.0 25 0 43478.0 + 18450 KYFDEHYEY 9 83 647.2748017189234 1292.5350505046467 2 647.2752563357353 MULTI CID FTMS 0 0 0 6299 481929.8125 0.0073660843795053 11 -1.3945655822753906 5 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 74.19965305603844 0.0194755241623067 2 [YE]HAYRYEY 9 5 + 69.509 0.0 0.0 5.3777 5.3777 74.305 0.0 0.0 0.0 3.3265059764113545 3.3265059764113545 3.3265059764113545 0.687587626244138 0 1.024227503252014 1.6989700043360187 0.3494850021680094 0.3252574989159953 [YE]HAYRYEY;[YE]H{[{M(Oxidation (M))|F}D]|MM}KYEY;KY{M(Oxidation (M))|F}YY{[MS]|[{M(Oxidation (M))|F}A]}EY;KY{M(Oxidation (M))|F}Y{[MS]|[{M(Oxidation (M))|F}A]}YEY;[YE]H{[{M(Oxidation (M))|F}D]|MM}YKEY;{[YC]|[HE]}D{M(Oxidation (M))|F}YKYEY;[YE]H{[{M(Oxidation (M))|F}D]|MM}YEKY;[YE]HAYYREY;[YE]HAY[VG]YEY;{[WN]|[YH]}EAYRYEY 5.3777;5.3245;5.1203;4.9664;4.5883;4.5134;4.5124;4.5053;4.4137;4.3316 -;-;-;-;-;-;-;-;-;- 1397 1 1.86 50554.2 1.0 2906 3396 6299 DOHH2_400M_050219_2,6304 DOHH2_400M_050219_2,6304,KYFDEHYEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6305 33.665 108.0 933290.0 25 0 165030.0 + 39005 TVRPGTTA 8 64 401.72427408183546 801.4339952304709 2 401.7231323122978 MULTI CID FTMS 0 0 0 6299 482059.03125 0.3709386542019866 -2 0.1788597106933593 6 Unmodified _TVRPGTTA_ REV__ENST00000554444.5_1_16:89998994-90001265:+|nuORF 0.6903765706972694 0.8201419426409876 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.86 86017.0 1.0 2907 3396 6299 DOHH2_400M_050219_2,6305 DOHH2_400M_050219_2,6305,TVRPGTTA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6306 33.671 340.0 195970.0 25 0 16011.0 + 45891 YYSASDNLQY 10 103 612.2623527778503 1222.5101526225003 2 612.2621948122978 MULTI CID FTMS 0 0 0 6299 251888.921875 0.105661916442875 -3 0.2177085876464843 7 Unmodified _YYSASDNLQY_ REV__ENSG00000065135|ENST00000369851|GNAI3;REV__nc|ENSG00000134183|P19087|GNAT2 11.640296217721598 0.652229146672156 2 [DN]SAG 5 -1 36.966 0.0 0.0 3.0238 0.0 0.0 0.0 775.3259844918942 775.3259844918942 8.228020514760534 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.5451140161145328 0.2614393726401688 [DN]SAG 3.0238 - 762 1 1.86 54370.2 1.0 2908 3396 6299 DOHH2_400M_050219_2,6306 DOHH2_400M_050219_2,6306,YYSASDNLQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6307 33.674 170.0 305130.0 25 0 19700.0 + 730 AEPYRPIQY 9 78 568.790456570581 1135.566360207962 2 568.7906982302666 MULTI CID FTMS 0 0 0 6299 229400.390625 0.3258935642878655 2 -0.2627220153808594 8 Unmodified _AEPYRPIQY_ ENSG00000144283|ENST00000389759|PKP4;nc|ENSG00000144283|Q99569-2|PKP4 48.345845343767074 0.0439967357579942 2 {[CP]|[EA]}PYR[{I|L}P]QY 9 0 + 33.17 0.0 0.0 2.921 2.921 78.952 0.0 0.0 0.0 15.629822226546295 5.735316426032433 5.735316426032433 13.0153844027246 0 0.4247425010840047 0.0 0.0 1.2302046884880935 + + {[CP]|[EA]}PYR[{I|L}P]QY;{[CP]|[EA]}PYR[{I|L}P][AG]Y 2.921;1.7749 +;- + 60 + 1 1.86 45032.5 1.0 2909 3396 6299 DOHH2_400M_050219_2,6307 DOHH2_400M_050219_2,6307,AEPYRPIQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6308 33.68 295.0 213450.0 25 0 13466.0 + 35206 SSDNIMVQY 9 104 536.734722780936 1071.4548926286718 2 536.7345458865166 MULTI CID FTMS 0 0 0 6299 194841.421875 1.0 0 0.0 9 Oxidation (M) _SSDNIM(Oxidation (M))VQY_ ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2 65.23502041540118 0.0231836506122253 2 {[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}VQY 8 5 + 42.879 0.0 0.0 4.002 4.002 68.754 0.0 0.0 0.0 5.2333934201041785 10.924778212679485 5.2333934201041785 0.5115252244738144 0 0.718765315847925 1.0 0.5752574989159953 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}VQY;{[QV]|[N{I|L}]|[RA]|[KV]}D{[CA]|SS}{M(Oxidation (M))|F}VQY;{[CA]|SS}[DN]{I|L}{M(Oxidation (M))|F}VQY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}VQY;[AG]V{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}VQY;[AG]VD{[CA]|SS}{M(Oxidation (M))|F}VQY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}D{[CA]|SS}VQY;[AG]V{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}VQY;[DN]{[CA]|SS}{I|L}{M(Oxidation (M))|F}VQY;[AG]V{M(Oxidation (M))|F}D{[CA]|SS}VQY 4.002;3.9542;3.5135;3.4133;3.3356;3.2929;3.2292;3.1023;2.9743;2.9232 -;-;+;-;-;-;-;-;-;- + 421 1 1.86 55670.0 1.0 2910 3396 6299 DOHH2_400M_050219_2,6308 DOHH2_400M_050219_2,6308,SSDNIMVQY True False SSDNIMVQY 33.679553 536.734545886517 891778.0625 6299.0 ENSG00000158623|ENST00000425248|COPG2;;nc|ENSG00000158623|Q9UBF2-2|COPG2;;ENSG00000181789|ENST00000314797|COPG1 7.338381449381511 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6309 33.693 800.0 214160.0 25 0 27009.0 3552 CYGRYWSYGFY 11 139 732.8058924126022 1463.5972318920044 2 732.8054687380791 MULTI CID FTMS 0 0 0 6299 167785.765625 1.0 0 0.0 10 Unmodified _CYGRYWSYGFY_ ENSG00000244624|ENST00000334664|KRTAP20-1 22.736283301280096 0.5583477779825423 2 {[DA]|[EG]}GAG[HN]AQQDA{M(Oxidation (M))|F}Y 14 11 + 96.318 0.0 0.0 6.5809 6.5809 80.707 0.0 0.0 0.0 2.384536604420489 11.504697682456351 2.384536604420489 2.2224750836870726 0 1.492992819099939 1.2218487496163564 1.8486198691406328 1.2302046884880935 {[DA]|[EG]}GAG[HN]AQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QG[HN]AQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AG[HN]AQQDA{M(Oxidation (M))|F}Y;[AG]DAG[HN]AQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GQ[HN]AQQDA{M(Oxidation (M))|F}Y;[AG]DQ[HN]AQQDA{M(Oxidation (M))|F}Y;[AG]NNHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAG[HN]A[AG]QDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAG[HN]AQ[AG]DA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAG[HN]AQQW{M(Oxidation (M))|F}Y 6.5809;6.4291;6.418;6.326;6.3145;6.0596;6.0346;5.9626;5.9626;5.8652 -;-;-;-;-;-;-;-;-;- 3134 1 1.86 121030.8 0.7300000190734863 2911 3396 6299 DOHH2_400M_050219_2,6309 DOHH2_400M_050219_2,6309,CYGRYWSYGFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6310 33.702 459.0 285800.0 25 0 15868.0 + -1 DTSRPLGDSMY 11 138 620.7680276123066 1239.521502291413 2 621.2745849490166 MULTI CID FTMS 0 0 0 6299 150383.578125 0.6040932515134108 -4 0.2265472412109375 11 Carbamidomethyl (C) _QQQALGESC(Carbamidomethyl (C))GY_ ENSG00000188554|ENST00000590996|NBR1;nc|ENSG00000188554|Q14596-2|NBR1 8.155526934196011 0.8366696279279818 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QS]|[NT]}[{I|L}P]GDSM 10 -1 39.627 0.0 0.0 3.1969 0.0 0.0 0.0 177.0308711790814 177.0308711790814 17.36371556024956 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.3494850021680094 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QS]|[NT]}[{I|L}P]GDSM 3.1969 - 1031 1 1.86 97190.6 1.0 2912 3396 6299 DOHH2_400M_050219_2,6310 DOHH2_400M_050219_2,6310,QQQALGESCGY False False DTSRPLGDSMY 33.701538 621.274584949017 458395.21875 6299.0 ENSG00000188554|ENST00000590996|NBR1;;nc|ENSG00000188554|Q14596-2|NBR1 4.321650664011638 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6311 33.706 213.0 270760.0 25 0 32308.0 7642 EKFDKMTV 8 89 499.2556805401072 0 499.2594177126884 PEAK CID FTMS 0 0 0 6299 130002.015625 0.4240780980718405 -3 0.2177085876464843 12 Unmodified _EKFDKMTV_ ENSG00000005100|ENST00000225296|DHX33;ENST00000575153.5_1_17:5347527-5364435:-|nuORF;nc|ENSG00000005100|Q9H6R0-2|DHX33 14.838274106304384 0.487171416001894 2 TM 2 7 7.9588 0.0 0.0 0.79868 0.0 0.0 117.06839881064202 644.3164339026323 761.3848327132744 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TM 0.79868 - 27 + 1 1.86 49810.8 1.0 2913 3396 6299 DOHH2_400M_050219_2,6311 DOHH2_400M_050219_2,6311,EKFDKMTV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6312 33.719 800.0 116200.0 25 0 6830.5 + 43568 YAAQENLEY 9 139 550.7483322282906 1099.482111523381 2 550.7488891482353 MULTI CID FTMS 0 0 0 6299 116222.2421875 0.67095962384092 1 -0.1145477294921875 13 Unmodified _YAAQENLEY_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 24.020572477871973 0.2255576514309169 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[DG]N{I|L}EY 9 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[DG]N{I|L}E + + 16.99 15.517 1.6896 1.5452 1.5452 47.142 0.0 0.0 0.0 0.0 -11.414412723804546 -11.414412723804546 0.0 0 0.0 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[DG]N{I|L}EY 1.5452 - 471 + 1 1.86 75786.4 0.6100000143051147 2914 3396 6299 DOHH2_400M_050219_2,6312 DOHH2_400M_050219_2,6312,YAAQENLEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6313 33.726 319.0 306030.0 25 0 32342.0 + -1 LLMKVSIVS 9 107 503.3066283932587 0 503.3062621951103 PEAK CID FTMS 0 0 0 6299 98188.375 0.1789973593852116 4 -0.4786605834960937 14 Oxidation (M) _LLM(Oxidation (M))KVSIVS_ REV__ENST00000556905.2_1_15:22016140-22016464:-|nuORF 12.531546534597751 0.2832320739326029 2 {I|L} 1 -1 6.9897 0.0 0.0 0.69577 0.0 0.0 112.08526372200022 776.4084370509341 888.4937007729344 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.69577 + + 3 + 1 1.86 81910.0 1.0 2915 3396 6299 DOHH2_400M_050219_2,6313 DOHH2_400M_050219_2,6313,LLMKVSIVS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6314 33.74 800.0 175270.0 25 0 12610.0 + 41644 VPPQKLQAL 9 129 497.3081549463309 992.6017569594618 2 497.3094665408134 MULTI CID FTMS 0 0 0 6299 93910.5 0.8083814467772494 1 -0.1145477294921875 15 Unmodified _VPPQKLQAL_ ENSG00000148943|ENST00000278193|LIN7C 28.486842064014134 0.1687311288560894 2 VPPQ 4 5 50.974 0.0 0.0 5.1354 0.0 0.0 0.0 568.3470309524407 568.3470309524407 21.341802184295915 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + VPPQ 5.1354 + + 1412 + 1 1.86 111096.8 0.4699999988079071 2916 3396 6299 DOHH2_400M_050219_2,6314 DOHH2_400M_050219_2,6314,VPPQKLQAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6315 33.754 800.0 117210.0 25 0 7753.5 + 13334 KENNIEQIY 9 140 575.790405192398 1149.566257451596 2 575.7910034060478 MULTI CID FTMS 0 0 0 6299 84513.921875 1.0 0 0.0 16 Unmodified _HLDKCMKLY_ nc|ENSG00000154473|O43684-2|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;ENSG00000154473|ENST00000368865|BUB3 18.13498045792455 0.3457906370836843 2 {[QN]|[E{I|L}]|[KN]}GW{I|L}EQ{I|L}Y 9 6 + 30.674 0.0 0.0 2.6683 2.6683 74.679 0.0 0.0 0.0 4.682656907234502 15.189185880463556 4.682656907234502 8.959951702273436 0 0.6989700043360187 1.2218487496163564 0.0 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}GW{I|L}EQ{I|L}Y;[AG]Y{[HG]|PP}{I|L}EQ{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QE{I|L}C(Carbamidomethyl (C))[{I|L}P]P;{[QN]|[E{I|L}]|[KN]}G{[DA]|[EG]}{I|L}EQ{I|L}Y;{[QN]|[E{I|L}]|[KN]}GW{I|L}E[AG]{I|L}Y;{[DS]|[MA]|[CV]|TT}PW{I|L}EQ{I|L}Y;{[QN]|[E{I|L}]|[KN]}M[KP]EQ{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QE{I|L}WPSP;[AG]S[RN]{I|L}EQ{I|L}Y;[YQ]{[HG]|PP}{I|L}EQ{I|L}Y 2.6683;1.8889;1.8835;1.8673;1.8673;1.7723;1.7586;1.5926;1.4738;1.3864 -;-;-;-;-;-;-;-;-;- 303 1 1.86 76597.4 0.4799999892711639 2917 3396 6299 DOHH2_400M_050219_2,6315 DOHH2_400M_050219_2,6315,HLDKCMKLY False False KENNIEQIY 33.754013 575.791003406048 791847.1875 6299.0 nc|ENSG00000154473|O43684-2|BUB3;;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;;ENSG00000154473|ENST00000368865|BUB3 1.9285437266031904 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6316 33.759 211.0 295920.0 25 0 77299.0 8332 ERQLLRPL 8 68 512.8168372612195 0 512.8169433474541 PEAK CID FTMS 0 0 0 6299 270199.5625 1.0 0 0.0 17 Unmodified _ERQLLRPL_ ENST00000547315.5_2_14:105461343-105461589:+|nuORF 12.531546534597751 0.5131024102181418 2 R 1 7 11.237 0.0 0.0 1.0978 0.0 0.0 129.04185099757768 735.4523347377549 864.4941857353326 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + R 1.0978 + + 3 + 1 1.86 55167.3 1.0 2918 3396 6299 DOHH2_400M_050219_2,6316 DOHH2_400M_050219_2,6316,ERQLLRPL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6317 33.765 314.0 293690.0 25 0 65205.0 26011 NLVYVVNY 8 95 492.2624934428678 0 492.2622558474541 PEAK CID FTMS 0 0 0 6299 256434.6875 0.3805460464375148 -4 0.2265472412109375 18 Unmodified _NLVYVVNY_ ENSG00000120948|ENST00000240185|TARDBP 13.50788311687929 0.5021269579892848 2 MKPS 4 8 11.759 0.0 0.0 1.1968 0.0 0.0 358.2211405949169 178.05140100650627 536.2725416014232 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 MKPS 1.1968 - 76 + 1 1.86 77988.0 1.0 2919 3396 6299 DOHH2_400M_050219_2,6317 DOHH2_400M_050219_2,6317,NLVYVVNY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6319 33.773 198.0 287620.0 25 0 22775.0 + 5131 DIHHKVLSL 9 107 531.3087866864607 1060.6030204397214 2 531.3085204958916 MULTI CID FTMS 0 0 0 6318 140729.03125 0.2312514859762356 2 -0.2874870300292969 1 Unmodified _DIHHKVLSL_ ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2 65.47368725323818 0.0230515101691092 2 {I|L}DHH 4 7 53.855 0.0 0.0 5.0778 0.0 0.0 0.0 555.3519381158811 555.3519381158811 17.409454462363783 0.0 0.0 0.0 0 0.9698565171985376 1.6989700043360187 0.0 0.0 {I|L}DHH 5.0778 - 458 + 1 1.868 49514.3 1.0 2920 3397 6318 DOHH2_400M_050219_2,6319 DOHH2_400M_050219_2,6319,DIHHKVLSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6320 33.785 738.0 196500.0 25 0 15344.0 + 8397 ESEEEEDDDSY 11 141 673.7230660622074 1345.4315791912147 2 673.7225219607353 MULTI CID FTMS 0 0 0 6318 79602.9375 0.1932291432380298 2 -0.2874870300292969 2 Unmodified _ESEEEEDDDSY_ REV__ENSG00000048649|ENST00000308488|RSF1;REV__nc|ENSG00000048649|Q96T23-2|RSF1;REV__nc|ENSG00000048649|Q96T23-3|RSF1 16.149105407346934 0.6992268271266642 2 YQY 3 -1 35.56 0.0 0.0 2.643 0.0 0.0 873.2317014508336 0.0 873.2317014508336 0.0 -5.803267625936385 -5.803267625936385 0.0 0 0.75 0.0 0.0 0.4247425010840047 YQY 2.643 - 392 1 1.868 108591.1 1.0 2921 3397 6318 DOHH2_400M_050219_2,6320 DOHH2_400M_050219_2,6320,ESEEEEDDDSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6321 33.787 29.0 2156800.0 25 0 555380.0 + 18454 KYFDEHYEY 9 70 431.85241170784207 1292.5354057237262 3 431.8523437380791 MULTI CID FTMS 0 0 0 6318 1902986.625 0.0666948480373667 12 -1.4936485290527344 3 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 30.63653989081413 0.1413794767160703 2 {[YC]|[HE]}D{M(Oxidation (M))|F}YK 6 6 21.309 0.0 0.0 1.6486 0.0 0.0 0.0 470.1572253074973 470.1572253074973 6.704620655334761 0.0 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.0 {[YC]|[HE]}D{M(Oxidation (M))|F}YK 1.6486 - 141 1 1.868 57275.4 1.0 2922 3397 6318 DOHH2_400M_050219_2,6321 DOHH2_400M_050219_2,6321,KYFDEHYEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6322 33.789 139.0 356680.0 25 0 38651.0 + 35217 SSDPASQLSY 10 89 527.7378814488542 1053.4612099645085 2 527.7379638552666 MULTI CID FTMS 0 0 0 6318 315056.3125 0.0578785466777773 10 -1.2800178527832031 4 Unmodified _SSDPASQLSY_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000536066.1_1_12:2967806-2973707:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1;nc|ENSG00000111206|Q08050-3|FOXM1 53.832793166522166 0.0576554960245129 2 {[C(Carbamidomethyl (C))E]|[WC]}[PA]SQ{I|L}SY 9 3 + 30.296 0.0 0.0 2.8758 2.8758 68.372 0.0 0.0 0.0 2.152274865413734 13.305840530896592 2.152274865413734 2.486512420283237 0 0.8935078169319297 0.0 1.1237125054200234 0.0 {[C(Carbamidomethyl (C))E]|[WC]}[PA]SQ{I|L}SY;{[CA]|SS}D[PA]SQ{I|L}SY;[PA]SQ{[C(Carbamidomethyl (C))E]|[WC]}{I|L}SY;[PA]{[C(Carbamidomethyl (C))E]|[WC]}SQ{I|L}SY;{[C(Carbamidomethyl (C))E]|[WC]}[PA]S[AG]{I|L}SY;[AG]S[PA]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}SY;[PA]D{[CA]|SS}SQ{I|L}SY;{[QS]|[NT]}[PA]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}SY;[PA]SQ{I|L}S{[DS]|[MA]|[CV]|TT}SY;{[CA]|SS}D[PA]S[AG]{I|L}SY 2.8758;2.6398;2.2933;2.0949;2.0017;1.9936;1.9763;1.9532;1.7715;1.7698 -;+;-;-;-;-;-;-;-;- + 290 1 1.868 46366.3 1.0 2923 3397 6318 DOHH2_400M_050219_2,6322 DOHH2_400M_050219_2,6322,SSDPASQLSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6323 33.793 173.0 434700.0 25 0 39338.0 + 7391 EGGIVSKNF 9 95 475.75074506017904 949.486937187158 2 475.7505676150322 MULTI CID FTMS 0 0 0 6318 294015.46875 0.7813661777765339 5 -0.6006889343261719 5 Unmodified _EGGIVSKNF_ ENSG00000152137|ENST00000281938|HSPB8 34.40172386719151 0.1061884637610825 2 {[DA]|[EG]}G{I|L} 4 5 30.93 0.0 0.0 3.2575 0.0 0.0 0.0 590.2959941542081 590.2959941542081 5.981770640406872 0.0 0.0 0.0 0 0.5 1.0 0.2742275032520141 0.0 + {[DA]|[EG]}G{I|L} 3.2575 + + 432 1 1.868 66992.2 1.0 2924 3397 6318 DOHH2_400M_050219_2,6323 DOHH2_400M_050219_2,6323,EGGIVSKNF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6324 33.797 241.0 341140.0 25 0 31197.0 -1 0 119 483.2373994950419 482.23012302844194 1 483.2383911013603 MULTI CID FTMS 0 0 0 6318 214828.6875 0.8818211968377663 5 -0.6006889343261719 6 2 Y 1 -1 12.218 0.0 0.0 2.5337 0.0 0.0 301.1559938553935 0.0 301.1559938553935 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5337 - 47 + 1 1.868 67231.8 1.0 2925 3397 6318 DOHH2_400M_050219_2,6324 DOHH2_400M_050219_2,6324, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6325 33.801 220.0 461570.0 25 0 74134.0 + 36855 TELPKAEKW 9 115 367.8693539114613 0 367.8694640994072 PEAK CID FTMS 0 0 0 6318 193752.640625 0.7826928394743481 5 -0.6006889343261719 7 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 20.41453444215458 0.197313647343139 2 KM 2 8 7.0783 0.0 0.0 0.96471 0.0 0.0 73.36599594285549 398.2000826471313 471.5660785899868 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KM 0.96471 - 69 + 1 1.868 85539.2 1.0 2926 3397 6318 DOHH2_400M_050219_2,6325 DOHH2_400M_050219_2,6325,TELPKAEKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6326 33.815 800.0 137040.0 25 0 11863.0 + 44006 YIDQGRNPQLY 11 116 683.8408101622156 0 683.8411132693291 PEAK CID FTMS 0 0 0 6318 145274.921875 1.0 0 0.0 8 Unmodified _YIDQGRNPQLY_ ENSG00000133398|ENST00000255764|MED10;ENST00000503112.1_1_5:6372618-6374583:-|nuORF 59.05245873256422 0.0175464156431399 2 {I|L}Y{I|L}[{M(Oxidation (M))|F}E]KD 7 10 50.31 0.0 0.0 3.6839 0.0 0.0 181.0718792452131 273.1249006745615 454.1967799197746 0.0 0.0 0.0 0.0 0 2.1989700043360187 0.0 0.0 0.9604093769761876 {I|L}Y{I|L}[{M(Oxidation (M))|F}E]KD 3.6839 - 2589 + 1 1.868 84814.7 0.7099999785423279 2927 3397 6318 DOHH2_400M_050219_2,6326 DOHH2_400M_050219_2,6326,YIDQGRNPQLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6327 33.829 800.0 122600.0 25 0 10144.0 + -1 RMYMFFGSGYF 11 122 711.3068117095552 0 711.3068115115166 PEAK CID FTMS 0 0 0 6318 133142.375 1.0 0 0.0 9 Oxidation (M) _RM(Oxidation (M))YMFFGSGYF_ REV__ENSG00000172324|ENST00000302040|OR5A2 8.745405648335112 0.4618489994582195 2 ANQQAE 6 -1 40.394 0.0 0.0 2.8434 0.0 0.0 328.14304842218354 448.15830408267817 776.3013525048617 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 ANQQAE 2.8434 - 647 + 1 1.868 71416.0 0.6899999976158142 2928 3397 6318 DOHH2_400M_050219_2,6327 DOHH2_400M_050219_2,6327,RMYMFFGSGYF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6328 33.843 800.0 125370.0 25 0 6688.2 -1 QANQRWMKSYC 11 120 744.329717119543 0 744.3301879763603 PEAK CID FTMS 0 0 0 6318 138241.640625 1.0 0 0.0 10 Carbamidomethyl (C),Oxidation (M) _QANQRWM(Oxidation (M))KSYC(Carbamidomethyl (C))_ ENST00000429713.6_1_4:119951242-119951311:+|nuORF 5.731851221503515 0.47618401536486 2 ANQQAE 6 -1 43.136 0.0 0.0 2.9016 0.0 0.0 328.13905369796026 514.2048433893186 842.343897087279 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 ANQQAE 2.9016 - 881 + 1 1.868 77744.5 0.6600000262260437 2929 3397 6318 DOHH2_400M_050219_2,6328 DOHH2_400M_050219_2,6328,QANQRWMKSYC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6329 33.858 800.0 120650.0 25 0 13340.0 + 25510 NEMQPNGKVF 10 147 582.2794739935729 1162.5443950539457 2 582.2792236208916 MULTI CID FTMS 0 0 0 6318 120514.890625 0.2107260571884442 2 -0.2874870300292969 11 Unmodified _NEMQPNGKVF_ ENSG00000068366|ENST00000672401|ACSL4;nc|ENSG00000068366|O60488|ACSL4 22.736283301280096 0.4578556481593033 2 [{I|L}T]C(Carbamidomethyl (C))QPN[RK]{M(Oxidation (M))|F} 9 5 + 24.275 0.0 0.0 2.0881 2.0881 65.645 0.0 0.0 0.0 7.865099081937263 3.952424927286845 3.952424927286845 1.2493873660830026 0 0.3182503180159344 1.0969100130080565 0.0 0.0 [{I|L}T]C(Carbamidomethyl (C))QPN[RK]{M(Oxidation (M))|F};[{I|L}T]C(Carbamidomethyl (C))QPN[KG]V{M(Oxidation (M))|F} 2.0881;1.9806 -;- 213 + 1 1.868 75875.9 0.5600000023841858 2930 3397 6318 DOHH2_400M_050219_2,6329 DOHH2_400M_050219_2,6329,NEMQPNGKVF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6330 33.869 636.0 150350.0 25 0 14021.0 + 36853 TELPKAEKW 9 127 551.2993708020731 1100.584188670946 2 551.2985717654228 MULTI CID FTMS 0 0 0 6318 95213.4140625 1.0 0 0.0 12 Unmodified _TELPKAEKW_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 32.037481411007896 0.1235546156350648 2 {[ET]|[MV]}{I|L}PKAEKW 9 0 + 36.833 0.0 0.0 3.3467 3.3467 80.29 0.0 0.0 0.0 7.147642715192511 9.208187539523756 7.147642715192511 14.593056725713115 0 1.6989700043360187 0.0 0.0 0.0 + + {[ET]|[MV]}{I|L}PKAEKW;{[ET]|[MV]}{I|L}P{I|L}{[QS]|[NT]}KW;{[DS]|[MA]|[CV]|TT}[KA]MKP{I|L}[DP];[KP]AEK{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[DP];{[ET]|[MV]}{I|L}P{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[DP];{[QN]|[E{I|L}]|[KN]}TP{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[DP];{[ET]|[MV]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}PDP{I|L};[KP]AE[{I|L}T]EKW;[KP]AEK{[QS]|[NT]}KW;[AG][KQ][Y{I|L}]P{I|L}[DP] 3.3467;2.0207;1.8521;1.8492;1.8487;1.596;1.3497;1.1126;1.1126;1.0422 +;-;-;-;-;-;-;-;-;- + 345 + 1 1.868 81085.6 1.0 2931 3397 6318 DOHH2_400M_050219_2,6330 DOHH2_400M_050219_2,6330,TELPKAEKW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6331 33.883 800.0 172860.0 25 0 17960.0 + 5307 DLDHSIGTQY 10 158 574.7637272628818 0 574.7637817263603 PEAK CID FTMS 0 0 0 6318 86425.515625 1.0 0 0.0 13 Unmodified _DLDHSIGTQY_ ENSG00000092203|ENST00000448790|TOX4;nc|ENSG00000092203|O94842-2|TOX4 39.94969957227396 0.1110137703778733 2 TY[MD]KD 6 9 23.573 0.0 0.0 2.0542 0.0 0.0 309.13596175056983 82.06686578922108 391.2028275397909 0.0 0.0 0.0 0.0 0 0.5010912013506126 0.0 1.110924374808178 0.3807196863200844 TY[MD]KD 2.0542 - 198 + 1 1.868 106136.1 0.4900000095367431 2932 3397 6318 DOHH2_400M_050219_2,6331 DOHH2_400M_050219_2,6331,DLDHSIGTQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6332 33.889 243.0 283770.0 25 0 19055.0 + 20740 LLSPMPEISV 10 113 543.3011303675436 0 543.3015014529228 PEAK CID FTMS 0 0 0 6318 277758.25 0.7965724027227843 5 -0.6006889343261719 14 Unmodified _LLSPMPEISV_ REV__ENSG00000132321|ENST00000409907|IQCA1;REV__nc|ENSG00000132321|Q86XH1-2|IQCA1;REV__nc|ENSG00000132321|Q86XH1-5|IQCA1 7.289230182591677 0.3953776778296116 2 Y 1 -1 6.9897 0.0 0.0 0.64446 0.0 0.0 225.0944614613212 693.4043673150999 918.4988287764212 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.64446 - 5 + 1 1.868 60741.2 1.0 2933 3397 6318 DOHH2_400M_050219_2,6332 DOHH2_400M_050219_2,6332,LLSPMPEISV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6333 33.894 290.0 253640.0 25 0 20540.0 -1 0 88 517.2855793377397 516.2783028711397 1 517.2856323122978 MULTI CID FTMS 0 0 0 6318 193851.515625 0.0618690418400286 9 -1.1053123474121094 15 2 {I|L} 1 -1 10.969 0.0 0.0 2.1246 0.0 0.0 385.18316234555215 0.0 385.18316234555215 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.1246 - 12 + 1 1.868 62590.6 1.0 2934 3397 6318 DOHH2_400M_050219_2,6333 DOHH2_400M_050219_2,6333, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6334 33.899 290.0 265100.0 25 0 32265.0 -1 PLLFMDLL 8 99 489.2738723428612 976.5331917525224 2 489.2727233767509 MULTI CID FTMS 0 0 0 6318 159461.453125 0.1993213973557593 13 -1.5454368591308594 16 Oxidation (M) _PLLFM(Oxidation (M))DLL_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4 11.114462752807354 0.7467182956244686 2 [{I|L}P]YP 4 -1 20.846 0.0 0.0 2.1347 0.0 0.0 0.0 503.2605531629318 503.2605531629318 5.184013239538741 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [{I|L}P]YP 2.1347 - 115 1 1.868 63271.2 1.0 2935 3397 6318 DOHH2_400M_050219_2,6334 DOHH2_400M_050219_2,6334,PLLFMDLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6335 33.913 800.0 141240.0 25 0 16667.0 41957 VQIVTKKI 8 147 464.8131923007944 927.6118316683888 2 464.8134338259697 MULTI CID FTMS 0 0 0 6318 131403.390625 1.0 0 0.0 17 Unmodified _VQIVTKKI_ ENSG00000078018|ENST00000682079|MAP2;nc|ENSG00000078018|P11137-2|MAP2;nc|ENSG00000078018|P11137-3|MAP2;nc|ENSG00000078018|P11137-4|MAP2 28.486842064014134 0.4448922141344407 2 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 5 37.958 0.0 0.0 4.092 0.0 0.0 0.0 584.377738890326 584.377738890326 24.85863111416478 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 4.092 + + 162 + 1 1.868 89703.1 0.5199999809265137 2936 3397 6318 DOHH2_400M_050219_2,6335 DOHH2_400M_050219_2,6335,VQIVTKKI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6337 33.918 56.0 1055700.0 25 0 196230.0 + 8390 ESEDPDYYQY 10 89 654.7489205402829 1307.4832881473658 2 654.7489501833916 MULTI CID FTMS 0 0 0 6336 947814.875 0.1006938689891123 2 -0.2159385681152343 1 Unmodified _ESEDPDYYQY_ ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I 61.357469665136826 0.0330252915653943 2 [DP]DD{[ET]|[MV]}YYQY 10 5 + 43.592 0.0 0.0 3.3341 3.3341 74.566 0.0 0.0 0.0 4.884381005764311 28.10788741577753 4.884381005764311 6.818722087674651 0 0.6677353201839438 0.0 1.9802046884880933 0.0 [DP]DD{[ET]|[MV]}YYQY;[DP]Y[C(Carbamidomethyl (C))H]YYQY;{[ES]|[DT]|[{I|L}C]}DE[DP]YYQY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SE[DP]YYQY;{[YD]|[{M(Oxidation (M))|F}M]}P[C(Carbamidomethyl (C))H]YYQY;[DP]N[WC(Carbamidomethyl (C))]YYQY;[DP]YY[C(Carbamidomethyl (C))H]YQY;{[ES]|[DT]|[{I|L}C]}DEY[DP]YQY;{[YD]|[{M(Oxidation (M))|F}M]}PY[C(Carbamidomethyl (C))H]YQY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SEY[DP]YQY 3.3341;2.8126;2.5228;2.4087;2.3521;2.3315;2.2605;1.8146;1.8;1.7005 -;-;-;-;-;-;-;-;-;- 442 1 1.869 49230.1 1.0 2937 3398 6336 DOHH2_400M_050219_2,6337 DOHH2_400M_050219_2,6337,ESEDPDYYQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6338 33.92 94.0 463640.0 25 0 58433.0 + 33681 THQGITSLY 9 74 510.75382696955694 0 510.7537414431572 PEAK CID FTMS 0 0 0 6336 395077.09375 0.2517995774894633 2 -0.2159385681152343 2 Unmodified _SIYFSQLY_ ENSG00000132793|ENST00000373257|LPIN3;ENST00000496565.5_1_20:39985772-39986924:+|nuORF;nc|ENSG00000132793|Q9BQK8-2|LPIN3 24.67388899826682 0.3296343502680589 2 {I|L}AS 3 6 16.995 0.0 0.0 1.667 0.0 0.0 199.08503323423264 546.2302950494749 745.3153282837075 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}AS 1.667 - 150 + 1 1.869 39725.4 1.0 2938 3398 6336 DOHH2_400M_050219_2,6338 DOHH2_400M_050219_2,6338,SIYFSQLY False False THQGITSLY 33.920466 510.753741443157 0.0 6336.0 ENSG00000132793|ENST00000373257|LPIN3;;ENST00000496565.5_1_20:39985772-39986924:+|nuORF;;nc|ENSG00000132793|Q9BQK8-2|LPIN3 -0.101471334695816 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6339 33.922 38.0 1876000.0 25 0 176690.0 + 24476 MIEPRTLQY 9 97 583.797370107426 1165.580187281652 2 583.7974731326103 MULTI CID FTMS 0 0 0 6336 1325185.875 0.568609651556608 -1 0.1481742858886718 3 Oxidation (M) _M(Oxidation (M))IEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 55.50274090549119 0.0285720310785888 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EK{[QN]|[E{I|L}]|[KN]}PQY 9 4 + 57.106 0.0 0.0 4.8994 4.8994 79.013 0.0 0.0 0.0 17.821290465856308 26.57698754585809 17.821290465856308 6.064921830680703 0 1.805462187404089 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EK{[QN]|[E{I|L}]|[KN]}PQY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EK{[QN]|[E{I|L}]|[KN]}QPY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EK{[QN]|[E{I|L}]|[KN]}P[AG]Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EK{[QN]|[E{I|L}]|[KN]}[AG]PY;[YE]PK{[QN]|[E{I|L}]|[KN]}PQY;[VP]T[YG]{[QN]|[E{I|L}]|[KN]}PQY;[YE]PK{[QN]|[E{I|L}]|[KN]}QPY;[YE]PK{[QN]|[E{I|L}]|[KN]}P[AG]Y;[VP]T[YG]{[QN]|[E{I|L}]|[KN]}QPY;[YE]PK{[QN]|[E{I|L}]|[KN]}[AG]PY 4.8994;4.379;4.1093;3.589;2.4962;1.9841;1.9759;1.7062;1.4638;1.1859 -;-;-;-;-;-;-;-;-;- 243 1 1.869 58292.5 1.0 2939 3398 6336 DOHH2_400M_050219_2,6339 DOHH2_400M_050219_2,6339,MIEPRTLQY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6340 33.923 54.0 1103500.0 25 0 70953.0 + 38621 TTEVHPELY 9 98 544.767100325284 1087.519647717368 2 544.7673828005791 MULTI CID FTMS 0 0 0 6336 1010326.75 1.0 0 0.0 4 Unmodified _TTEVHPELY_ ENSG00000125991|ENST00000348547|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3 81.61307344734483 0.0171259190214613 2 TTE[HV][EP]{I|L}Y 9 0 + 71.22 0.0 0.0 6.5489 6.5489 87.066 0.0 0.0 0.0 15.540582889866704 14.973024840566469 14.973024840566469 8.093859345357188 0 1.9291746928241125 2.0 0.3054621874040891 0.0 + + TTE[HV][EP]{I|L}Y;TT[{M(Oxidation (M))|F}V]H[HA]{I|L}Y;[EP]HVE{I|L}TTY;[EP]{I|L}[HD]{I|L}TTY;[EP]{I|L}YYQ{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EVE{I|L}TTY;{[DS]|[MA]|[CV]|TT}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N{I|L}TTY;[EP]HVE{[DS]|[MA]|[CV]|TT}{I|L}Y;[EP]{I|L}[HD]{[DS]|[MA]|[CV]|TT}{I|L}Y;{[DS]|[MA]|[CV]|TT}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GG{I|L}TTY 6.5489;5.8046;4.249;3.998;3.5788;3.4342;3.3949;3.1007;2.8497;2.5481 +;-;-;-;-;-;-;-;-;- + 592 + 1 1.869 52180.1 1.0 2940 3398 6336 DOHH2_400M_050219_2,6340 DOHH2_400M_050219_2,6340,TTEVHPELY True True TTEVHPELY 33.923045 544.767382800579 6391604.5 6336.0 nc|ENSG00000125991|Q9Y282-2|ERGIC3;;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;;nc|ENSG00000125991|Q9Y282-3|ERGIC3;;ENSG00000125991|ENST00000348547|ERGIC3 8.230666796366373 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6341 33.928 253.0 547340.0 25 0 86463.0 -1 0 102 406.789359926875 811.5641669205501 2 406.7893554568291 MULTI CID FTMS 0 0 0 6336 445397.09375 1.0 0 0.0 5 2 {I|L}G{I|L}KR{I|L}{I|L} 7 -1 + 48.022 0.0 0.0 5.9172 5.9172 92.069 0.0 0.0 0.0 32.180667559515435 10.102323681353091 10.102323681353091 35.77968140997108 0 1.1237125054200234 0.0 0.0 0.0 {I|L}G{I|L}KR{I|L}{I|L};[RK]{I|L}{I|L}G{I|L}{I|L};[K{I|L}][R{I|L}]G{I|L}{I|L} 5.9172;1.5085;1.3545 -;-;- 65 + 1 1.869 111310.5 1.0 2941 3398 6336 DOHH2_400M_050219_2,6341 DOHH2_400M_050219_2,6341, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6342 33.931 178.0 673500.0 25 0 38832.0 + 29033 QEFEHVNGRW 10 105 434.5385685629724 1300.5938762891171 3 434.5390807986259 MULTI CID FTMS 0 0 0 6336 410313.6875 1.0 0 0.0 6 Unmodified _QEFEHVNGRW_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 29.84058131909904 0.2982332456971691 2 [{M(Oxidation (M))|F}T]PWVHE{[CP]|[EA]}W 10 8 + 48.633 0.0 0.0 3.7393 3.7393 75.061 0.0 0.0 0.0 2.2969624387961574 18.71458906067411 2.2969624387961574 6.3790072413555805 0 0.1747425010840047 0.0 1.1022338482433751 0.0 [{M(Oxidation (M))|F}T]PWVHE{[CP]|[EA]}W;[DP][YR]VHE{[CP]|[EA]}W;{[YC]|[HE]}[HK]VHE{[CP]|[EA]}W;[{M(Oxidation (M))|F}T]PVWHE{[CP]|[EA]}W;{[CT]|[{M(Oxidation (M))|F}G]}{[CP]|[EA]}EHVWN{[NV]|[RG]};{[CT]|[{M(Oxidation (M))|F}G]}{[CP]|[EA]}EHVNW{[NV]|[RG]};{[CT]|[{M(Oxidation (M))|F}G]}{[NV]|[RG]}NVHE{[CP]|[EA]}W;[{M(Oxidation (M))|F}T]PV{[DA]|[EG]}HE{[CP]|[EA]}W;[{M(Oxidation (M))|F}T]PWV[{M(Oxidation (M))|F}T]{[MS]|[{M(Oxidation (M))|F}A]}W;{[CT]|[{M(Oxidation (M))|F}G]}{[CP]|[EA]}EHVNAD{[NV]|[RG]} 3.7393;3.2489;3.2489;3.0895;2.8905;2.5236;2.3892;2.3849;2.3761;2.2983 -;-;-;-;-;-;-;-;-;- 815 1 1.869 99411.2 1.0 2942 3398 6336 DOHH2_400M_050219_2,6342 DOHH2_400M_050219_2,6342,QEFEHVNGRW False True QEFEHVNGRW 33.931203 434.539080798626 984087.1875 6336.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 5.180521170298259 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6343 33.935 184.0 597110.0 25 0 47869.0 + 25479 NELDAVQREY 10 105 618.7962597053777 1235.5779664775553 2 618.7961913943291 MULTI CID FTMS 0 0 0 6336 357267.5625 0.5102035242477122 -1 0.1481742858886718 7 Unmodified _NELDAVQREY_ ENSG00000080986|ENST00000261597|NDC80 74.7717668357584 0.0187829169580365 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAR{I|L}NEY 10 3 + 71.737 0.0 0.0 5.8059 5.8059 79.456 0.0 0.0 0.0 3.129529932484502 3.129529932484502 3.129529932484502 3.129529932484502 0 2.167735320183944 0.0 0.7302046884880937 0.6382104921644451 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAR{I|L}NEY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVQREY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVQVGEY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GER{I|L}NEY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAR{I|L}GGEY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}G[TP]S{I|L}NEY;[AG]D{I|L}DAR{I|L}NEY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAV[AG]REY;{[DA]|[EG]}G{I|L}DAR{I|L}NEY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[HT]V[MT]EY 5.8059;5.5526;5.5191;5.0792;5.0642;5.0069;4.8471;4.8109;4.8057;4.7813 -;+;-;-;-;-;-;-;-;- + 1447 1 1.869 86960.2 1.0 2943 3398 6336 DOHH2_400M_050219_2,6343 DOHH2_400M_050219_2,6343,NELDAVQREY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6344 33.938 172.0 489920.0 25 0 88995.0 16517 KAPPGPAR 8 105 397.2372573807285 792.4599618282571 2 397.2375671267509 MULTI CID FTMS 0 0 0 6336 353946.375 1.0 0 0.0 8 Unmodified _KAPPGPAR_ ENSG00000179588|ENST00000319555|ZFPM1 2.302733041254933 0.8103549651115762 2 {I|L}{I|L}HR 4 7 43.245 0.0 0.0 5.4571 0.0 0.0 255.1208976033294 0.0 255.1208976033294 0.0 30.14645333192 0.0 0.0 0 0.805462187404089 0.0 0.0 0.3252574989159953 {I|L}{I|L}HR 5.4571 - 40 + 1 1.869 71838.2 1.0 2944 3398 6336 DOHH2_400M_050219_2,6344 DOHH2_400M_050219_2,6344,KAPPGPAR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6345 33.944 306.0 348930.0 25 0 21602.0 -1 0 105 918.4193950315004 1834.8242371298008 2 918.4219848513604 MULTI CID FTMS 0 0 0 6336 310753.53125 0.2827456646346969 -2 0.2627220153808594 9 2 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQT[NP]Y{I|L}{[QS]|[NT]} 16 -1 + 99.942 0.0 0.0 5.4469 5.4469 76.459 0.0 0.0 0.0 2.191512336730028 2.191512336730028 2.191512336730028 2.191512336730028 0 2.142159058960253 0.0 0.6549471895720984 1.7971062485323517 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQT[NP]Y{I|L}{[QS]|[NT]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NWQT[NP]Y{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NADQT[NP]Y{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[AG]T[NP]Y{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGADQT[NP]Y{I|L}{[QS]|[NT]};[NP]{I|L}N{M(Oxidation (M))|F}N[H{I|L}]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 5.4469;5.3275;5.0813;4.9557;4.9557;4.9557;4.86;4.8362;4.8362;4.8362 -;-;-;-;-;-;-;-;-;- 4449 + 1 1.869 76517.8 1.0 2945 3398 6336 DOHH2_400M_050219_2,6345 DOHH2_400M_050219_2,6345, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6346 33.949 288.0 680510.0 25 0 186720.0 + 7941 ELRRTLQSL 9 123 558.3302690284613 1114.6459851237223 2 558.3299438357353 MULTI CID FTMS 0 0 0 6336 264102.25 0.6216350881890192 -1 0.1481742858886718 10 Unmodified _ELRRTLQSL_ ENSG00000139842|ENST00000375440|CUL4A;ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000139842|Q13619-2|CUL4A;nc|ENSG00000158290|Q13620-3|CUL4B;nc|ENSG00000158290|Q13620|CUL4B 38.17557092003332 0.0854718145212029 2 {I|L}ER 3 7 39.609 0.0 0.0 3.5535 0.0 0.0 0.0 713.3931368463499 713.3931368463499 12.346368802282017 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3807196863200844 0.3494850021680094 {I|L}ER 3.5535 - 397 + 1 1.869 154516.7 1.0 2946 3398 6336 DOHH2_400M_050219_2,6346 DOHH2_400M_050219_2,6346,ELRRTLQSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6347 33.957 445.0 286970.0 25 0 15543.0 + 11205 GENPNPNDW 9 149 521.7147933413291 1041.4150337494582 2 521.7153198122978 MULTI CID FTMS 0 0 0 6336 249686.78125 1.0 0 0.0 11 Unmodified _GENPNPNDW_ ENSG00000048028|ENST00000696973|USP28;nc|ENSG00000048028|Q96RU2-2|USP28;nc|ENSG00000048028|Q96RU2-3|USP28;nc|ENSG00000048028|Q96RU2|USP28 47.594388314883695 0.0456443387682827 2 [NP]DAN 5 6 47.195 0.0 0.0 4.5318 0.0 0.0 0.0 527.1900913116385 527.1900913116385 20.551798111188468 0.0 0.0 0.0 0 1.0 1.0969100130080565 0.2887254899964357 0.5891368308784531 [NP]DAN 4.5318 - 521 1 1.869 102053.2 1.0 2947 3398 6336 DOHH2_400M_050219_2,6347 DOHH2_400M_050219_2,6347,GENPNPNDW True True GENPNPNDW 33.956937 521.715319812298 2733976.5 6336.0 nc|ENSG00000048028|Q96RU2|USP28;;nc|ENSG00000048028|Q96RU2-2|USP28;;nc|ENSG00000048028|Q96RU2-3|USP28;;ENSG00000048028|ENST00000696973|USP28 8.527241071065268 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6348 33.96 147.0 504410.0 25 0 66612.0 + 44328 YLPNKQVL 8 80 487.7873245001674 973.5600960671349 2 487.7874328494072 MULTI CID FTMS 0 0 0 6336 248412.9375 0.85406873451243 -1 0.1481742858886718 12 Unmodified _YLPNKQVL_ ENSG00000131979|ENST00000491895|GCH1;nc|ENSG00000131979|P30793-2|GCH1;nc|ENSG00000131979|P30793-4|GCH1;nc|ENSG00000131979|P30793-3|GCH1 20.871210003555333 0.6025813472596342 2 [Y{I|L}]P 3 5 32.447 0.0 0.0 3.3328 0.0 0.0 0.0 597.3355806940061 597.3355806940061 12.028937514676484 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + [Y{I|L}]P 3.3328 + + 48 + 1 1.869 62119.4 1.0 2948 3398 6336 DOHH2_400M_050219_2,6348 DOHH2_400M_050219_2,6348,YLPNKQVL False False YLPNKQVL 33.95987 487.787432849407 3100939.0 6336.0 ENSG00000131979|ENST00000491895|GCH1;;nc|ENSG00000131979|P30793-2|GCH1;;nc|ENSG00000131979|P30793-4|GCH1;;nc|ENSG00000131979|P30793-3|GCH1 -0.0426485414306322 2.0 True 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6349 33.974 800.0 157100.0 25 0 9193.4 28976 QDLPDCCFWAS 11 150 642.752792715422 1283.4910324976438 2 642.7529174685478 MULTI CID FTMS 0 0 0 6336 167167.265625 0.243401341681387 2 -0.2159385681152343 13 Unmodified _QDLPDCCFWAS_ ENST00000421852.5_1_3:185207567-185207957:-|nuORF 20.41453444215458 0.6105011870913812 2 [AG]D{I|L}[NP]ME[SG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 12 9 + 30.472 0.0 0.0 2.3742 2.3742 69.71 0.0 0.0 0.0 4.156687756324686 1.3727247168202474 1.3727247168202474 4.156687756324686 0 0.9247425010840048 0.958607314841775 0.6109243748081782 0.0 [AG]D{I|L}[NP]ME[SG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[NP]ME[SG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[AG]D{I|L}[NP]M{[WS]|[C(Carbamidomethyl (C)){I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[NP]M{[WS]|[C(Carbamidomethyl (C)){I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};GGE{I|L}[NP]ME[SG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};GGE{I|L}[NP]M{[WS]|[C(Carbamidomethyl (C)){I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{NN|[MP]|[D{I|L}]|[EV]}Q[NP]ME[SG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{NN|[MP]|[D{I|L}]|[EV]}Q[NP]M{[WS]|[C(Carbamidomethyl (C)){I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 2.3742;2.0503;1.859;1.538;1.4379;0.92279;0.87272;0.36038 -;-;-;-;-;-;-;- 605 1 1.869 94494.5 0.7699999809265137 2949 3398 6336 DOHH2_400M_050219_2,6349 DOHH2_400M_050219_2,6349,QDLPDCCFWAS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6350 33.979 304.0 837690.0 25 0 84702.0 + 2876 AVDPTSGQLY 10 164 525.7585991896497 1049.5026454460992 2 525.7587158083916 MULTI CID FTMS 0 0 0 6336 163844.921875 0.0166419954472549 -2 0.2627220153808594 14 Unmodified _AVDPTSGQLY_ ENSG00000132182|ENST00000254508|NUP210 118.0683919894846 0.0007567732739793 2 [TP]SGQD{I|L}G{I|L}Y 10 6 + 108.88 0.0 0.0 10.374 10.374 83.165 0.0 0.0 0.0 0.5237875363565792 16.53212513775344 0.5237875363565792 0.5237875363565792 0 1.8494850021680087 1.3010299956639813 1.7555233930907204 1.3441876774005248 [TP]SGQD{I|L}G{I|L}Y;{[VA]|[{I|L}G]}DGQD{I|L}G{I|L}Y;[TP]SGQ{I|L}DG{I|L}Y;{[VA]|[{I|L}G]}DGQ{I|L}DG{I|L}Y;[TP]SGQDAV{I|L}Y;{[VA]|[{I|L}G]}DGQDAV{I|L}Y;[TP]SDGQ{I|L}G{I|L}Y;[TP]SGQD{I|L}AVY;{[VA]|[{I|L}G]}DDGQ{I|L}G{I|L}Y;{[VA]|[{I|L}G]}DGQD{I|L}AVY 10.374;10.324;10.12;10.07;9.2344;9.1845;9.1009;9.0913;9.051;9.0414 -;-;-;-;-;-;-;-;-;- 12890 1 1.869 196910.2 1.0 2950 3398 6336 DOHH2_400M_050219_2,6350 DOHH2_400M_050219_2,6350,AVDPTSGQLY True True AVDPTSGQLY 33.97927 525.758715808392 47822056.0 6336.0 ENSG00000132182|ENST00000254508|NUP210 5.139902750651042 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6351 33.994 800.0 204530.0 25 0 16226.0 + -1 EWDRWMVRFY 10 142 752.3485375349919 1502.6825221367835 2 752.3486205935478 MULTI CID FTMS 0 0 0 6336 155344.734375 1.0 0 0.0 15 Oxidation (M) _EWDRWM(Oxidation (M))VRFY_ REV__ENST00000558045.2_1_14:24608221-24608440:-|nuORF 6.723162845929126 0.6955379296933136 2 {[QG]|[NA]}G[YK]E[QA]QNA{M(Oxidation (M))|F}Y 13 -1 + 62.985 0.0 0.0 4.1915 4.1915 72.298 0.0 0.0 0.0 2.793194110582917 2.793194110582917 2.793194110582917 2.793194110582917 0 1.1069758080123702 0.744727494896694 0.0 1.548455006504028 {[QG]|[NA]}G[YK]E[QA]QNA{M(Oxidation (M))|F}Y;[EP]TWQ[C(Carbamidomethyl (C))K]TGS{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YK]E[QA]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AME[C(Carbamidomethyl (C))K]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HQ][WP]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG[HA][WP]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YK]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HA]G[WP]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HQ][WP]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AG[HA][WP]QNA{M(Oxidation (M))|F}Y 4.1915;4.0057;3.925;3.7853;3.773;3.7269;3.6253;3.6157;3.5064;3.4587 -;-;-;-;-;-;-;-;-;- 4686 1 1.869 113431.8 0.7400000095367432 2951 3398 6336 DOHH2_400M_050219_2,6351 DOHH2_400M_050219_2,6351,EWDRWMVRFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6352 34.001 396.0 256490.0 25 0 32440.0 -1 DEEEEEEEEM 10 118 438.4800387551323 1312.4182868655969 3 438.4802123904228 MULTI CID FTMS 0 0 0 6336 127979.578125 1.0 0 0.0 16 Oxidation (M) _DEEEEEEEEM(Oxidation (M))_ ENSG00000134504|ENST00000580059|KCTD1 5.783430956126388 0.6998847395148697 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EDS{M(Oxidation (M))|F}Y 7 -1 62.765 0.0 0.0 4.7824 0.0 0.0 0.0 374.06003748111567 374.06003748111567 50.54699171237935 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.75 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EDS{M(Oxidation (M))|F}Y 4.7824 - 147 + 1 1.869 84224.2 1.0 2952 3398 6336 DOHH2_400M_050219_2,6352 DOHH2_400M_050219_2,6352,DEEEEEEEEM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6353 34.015 800.0 82689.0 25 0 6703.5 -1 YEICCWCAYY 10 98 687.2530920645964 1372.4916311959928 2 687.7539550662041 MULTI CID FTMS 0 0 0 6336 107768.921875 1.0 0 0.0 17 Carbamidomethyl (C) _YEIC(Carbamidomethyl (C))CWCAYY_ ENSG00000146383|ENST00000275198|TAAR6 1.6526216038709556 0.7189921496796233 2 Y 1 -1 14.604 0.0 0.0 1.0641 0.0 0.0 1191.417166329585 0.0 1191.417166329585 0.0 3.634993639681312 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0641 + + 36 + 1 1.869 52982.7 0.6499999761581421 2953 3398 6336 DOHH2_400M_050219_2,6353 DOHH2_400M_050219_2,6353,YEICCWCAYY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6354 34.026 553.0 219960.0 25 0 34930.0 + 23219 LSSRLNRSV 9 135 516.3009968490343 0 516.3098632693291 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _LSSRLNRSV_ REV__ENSG00000085840|ENST00000371568|ORC1 6.723162845929126 0.3444685223463734 2 {M(Oxidation (M))|F}H 2 -1 7.9588 0.0 0.0 0.77226 0.0 0.0 644.4621793896716 99.0094469659789 743.4716263556505 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}H 0.77226 - 22 + 1 1.869 97464.9 1.0 2954 3398 6336 DOHH2_400M_050219_2,6354 DOHH2_400M_050219_2,6354,LSSRLNRSV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6355 34.039 744.0 254160.0 25 0 31066.0 -1 0 63 993.5059285071692 0 993.5062744021416 PEAK CID FTMS 0 0 0 6336 411564.21875 1.0 0 0.0 19 2 V 1 -1 1.5938 0.0 0.0 0.080292 0.0 0.0 914.431704571176 968.4699948209252 1882.901699392101 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.080292 - 2 + 1 1.869 124889.0 1.0 2955 3398 6336 DOHH2_400M_050219_2,6355 DOHH2_400M_050219_2,6355, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6356 34.053 800.0 151470.0 25 0 6537.4 -1 0 130 648.4425200214652 647.4352435548651 1 648.4438354372978 MULTI CID FTMS 0 0 0 6336 151254.328125 1.0 0 0.0 20 2 [YE]H 3 -1 25.819 0.0 0.0 3.9879 0.0 0.0 0.0 215.2472302094151 215.2472302094151 10.245886014129136 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2887254899964357 0.0 [YE]H 3.9879 - 98 1 1.869 101662.2 0.6899999976158142 2956 3398 6336 DOHH2_400M_050219_2,6356 DOHH2_400M_050219_2,6356, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6358 34.057 24.0 1569200.0 25 0 118260.0 + -1 GTDNPLSGGDQY 12 86 612.2623527778503 1222.5101526225003 2 612.2625610232353 MULTI CID FTMS 0 0 0 6357 2383914.0 1.0 0 0.0 1 Carbamidomethyl (C) _EGSNC(Carbamidomethyl (C))SEDKVV_ ENST00000429133.5_1_2:216974075-216982480:+|nuORF;ENST00000476360.1_1_2:216974075-216981630:+|nuORF;ENSG00000079246|ENST00000392132|XRCC5 12.240655878213236 0.7805268987462184 2 [DN]SAP{I|L}S[DN]QY 11 -1 + 70.869 0.0 0.0 5.797 5.797 75.091 0.0 0.0 0.0 16.989700043360187 0.1722032235195314 0.1722032235195314 0.1722032235195314 0 1.9564608101803795 1.0969100130080565 0.6109243748081782 1.0994850021680094 [DN]SAP{I|L}S[DN]QY;[DN]SAP{I|L}S[MD]HH;[DN]SAP{I|L}G[{M(Oxidation (M))|F}E]HH;[NS]DAP{I|L}S[DN]QY;[NS]DAP{I|L}S[MD]HH;{[SA]|[TG]}[DN]P{I|L}S[DN]QY;{[SA]|[TG]}[DN]P{I|L}S[MD]HH;[NS]DAP{I|L}G[{M(Oxidation (M))|F}E]HH;[DN]SAG[{I|L}P][{M(Oxidation (M))|F}E]HH;[DN]S[{I|L}P]AS[DN]QY 5.797;5.7829;5.1565;4.4073;4.3932;4.1097;4.0956;3.7667;3.726;3.5266 -;-;-;-;-;-;-;-;-;- 423 1 1.869 37151.3 1.0 2957 3399 6357 DOHH2_400M_050219_2,6358 DOHH2_400M_050219_2,6358,EGSNCSEDKVV False False GTDNPLSGGDQY 34.057205 612.262561023235 57375330.0 6357.0 ENST00000429133.5_1_2:216974075-216982480:+|nuORF;;ENST00000476360.1_1_2:216974075-216981630:+|nuORF;;ENSG00000079246|ENST00000392132|XRCC5 7.546304066975911 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6359 34.059 86.0 700270.0 25 0 99918.0 + 18022 KSGKQGPT 8 68 401.72427408183546 801.4339952304709 2 401.7231017947197 MULTI CID FTMS 0 0 0 6357 395050.15625 0.3039863664034601 1 -0.0766258239746093 2 Unmodified _KSGKQGPT_ REV__ENSG00000169436|ENST00000303045|COL22A1;REV__ENST00000341807.8_1_8:139601498-139734429:-|nuORF;REV__nc|ENSG00000169436|Q8NFW1-2|COL22A1;REV__nc|ENSG00000169436|Q8NFW1-3|COL22A1 2.302733041254933 0.8103549651115762 2 Y 1 -1 15.485 0.0 0.0 1.9321 0.0 0.0 620.3595761404304 0.0 620.3595761404304 0.0 2.1406890866599646 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.9321 - 4 + 1 1.869 54062.6 1.0 2958 3399 6357 DOHH2_400M_050219_2,6359 DOHH2_400M_050219_2,6359,KSGKQGPT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6360 34.06 45.0 1899100.0 25 0 195660.0 + 14511 IGQIKRIL 8 80 470.81875223400897 939.622951534818 2 470.8187744021416 MULTI CID FTMS 0 0 0 6357 1644221.625 0.5348996531428601 -1 0.139312744140625 3 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 30.22481116460888 0.4082965392918993 2 K{I|L}KR{I|L}{I|L} 6 -1 35.551 0.0 0.0 3.7836 0.0 0.0 170.06788477433776 0.0 170.06788477433776 0.0 28.350118350877658 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.6421590589602533 K{I|L}KR{I|L}{I|L} 3.7836 - 50 + 1 1.869 72930.6 1.0 2959 3399 6357 DOHH2_400M_050219_2,6360 DOHH2_400M_050219_2,6360,IGQIKRIL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6361 34.062 38.0 1503700.0 25 0 168430.0 + 11093 GEEGSARMW 9 73 511.7216215835817 1021.4286902339634 2 511.7217895388603 MULTI CID FTMS 0 0 0 6357 1304690.75 0.5340629215888597 -1 0.139312744140625 4 Unmodified _GEEGSARMW_ ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF 40.23920728925047 0.0741434193262949 2 {[DA]|[EG]}EGSARMW 9 0 + 92.401 0.0 0.0 9.0462 9.0462 97.064 0.0 0.0 0.0 71.687522094009 13.46787486224656 13.46787486224656 19.987737688117235 0 1.6549471895720984 2.0 0.4247425010840047 0.0 + + {[DA]|[EG]}EGSARMW;{[DA]|[EG]}WSA[VG]MW;WEGSA[VG]MW;{[DA]|[EG]}E{[QS]|[NT]}RMW;{[DA]|[EG]}EG[WK]MW;{[DA]|[EG]}EGR{[SA]|[TG]}MW;{[DA]|[EG]}EGSA{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[TV]|[{I|L}S]};WE{[QS]|[NT]}[VG]MW;{[DA]|[EG]}W[VG]{[SA]|[TG]}MW;WEG[VG]{[SA]|[TG]}MW 9.0462;7.0894;7.0882;6.871;6.871;6.6211;5.5772;4.913;4.6642;4.663 +;-;-;-;-;-;-;-;-;- + 256 + 1 1.869 51685.6 1.0 2960 3399 6357 DOHH2_400M_050219_2,6361 DOHH2_400M_050219_2,6361,GEEGSARMW True True GEEGSARMW 34.061521 511.72178953886 22940686.0 6357.0 ENST00000550009.1_1_12:120875908-120876378:+|nuORF;;ENSG00000111775|ENST00000229379|COX6A1 6.424100875854492 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6362 34.063 40.0 1972300.0 25 0 509880.0 + 45270 YSDKYFDEHY 10 82 456.1910627873616 1365.551358962285 3 456.1911193728447 MULTI CID FTMS 0 0 0 6357 1268042.5 0.4276245652973556 -1 0.139312744140625 5 Unmodified _YSDKYFDEHY_ chr9:89311345-89315170|10|74.8|0.14|9.01|+|1|None,CKS2|1;ENSG00000123975|ENST00000314355|CKS2 46.4752305370441 0.1008384395814411 2 YSDKY{M(Oxidation (M))|F}DEHY 10 0 + 99.946 0.0 0.0 7.3191 7.3191 86.388 0.0 0.0 0.0 33.52182518111363 5.440680443502757 5.440680443502757 5.440680443502757 0 0.6109243748081782 1.6989700043360187 0.7742275032520141 0.0 + + YSDKY{M(Oxidation (M))|F}DEHY;YSDKY{M(Oxidation (M))|F}DEYH;YSDKY{M(Oxidation (M))|F}[EC]S[QP];YS[KC]E{[{M(Oxidation (M))|F}D]|MM}YS[QP];YS[KC]E{[{M(Oxidation (M))|F}D]|MM}SY[QP];{[DS]|[MA]|[CV]|TT}K[EC]{M(Oxidation (M))|F}YKD[MT];YS[KC]E{[{M(Oxidation (M))|F}D]|MM}SR[MT];{[DS]|[MA]|[CV]|TT}KY{[{M(Oxidation (M))|F}D]|MM}E[KC][MT];{[QD]|[EN]|[WG]|[KD]|[RS]}Y[WY]E[KC][MT] 7.3191;6.9207;5.4472;3.4814;2.8907;2.772;2.4436;0.80614;0.16086 +;-;-;-;-;-;-;-;- + 380 + 1 1.869 67510.7 1.0 2961 3399 6357 DOHH2_400M_050219_2,6362 DOHH2_400M_050219_2,6362,YSDKYFDEHY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6363 34.064 40.0 1431800.0 25 0 94328.0 + 2531 ASDPYQVHV 9 83 508.2457842043588 1014.4770154755176 2 508.2461425662041 MULTI CID FTMS 0 0 0 6357 1050803.5 0.3356722714879411 -1 0.139312744140625 6 Unmodified _ASDPYQVHV_ ENSG00000047315|ENST00000314595|POLR2B 54.773552608820026 0.0299037012502309 2 {[SA]|[TG]}DPYQV[HV] 9 0 + 58.527 0.0 0.0 5.7692 5.7692 88.833 0.0 0.0 0.0 29.653251936605955 5.944825567400315 5.944825567400315 13.015384402724592 0 0.7887254899964358 1.3979400086720375 0.0 0.3807196863200844 + + {[SA]|[TG]}DPYQV[HV];{[SA]|[TG]}DPY[AG]V[HV];{[SA]|[TG]}{[ET]|[MV]}VHWW;{[SA]|[TG]}D[SG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V[HV];{[SA]|[TG]}D[{I|L}T]{[CA]|SS}V[HV];{[SA]|[TG]}D[{I|L}T]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[HV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVHWW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[SG]VHWW;{[SA]|[TG]}[MT]P{[CA]|SS}V[HV];{[SA]|[TG]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V[HV] 5.7692;4.4862;3.3868;2.6379;2.6379;2.2908;2.2318;2.0791;1.883;1.7094 +;-;-;-;-;-;-;-;-;- + 324 + 1 1.869 51599.9 1.0 2962 3399 6357 DOHH2_400M_050219_2,6363 DOHH2_400M_050219_2,6363,ASDPYQVHV True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6364 34.065 62.0 1022600.0 25 0 82924.0 + 4834 DFKDKYESL 9 99 572.7793266426733 1143.5441003521464 2 572.7794677615166 MULTI CID FTMS 0 0 0 6357 837746.6875 0.6095567544421556 -1 0.139312744140625 7 Unmodified _DFKDKYESL_ ENSG00000156136|ENST00000286648|DCK;ENST00000509764.1_1_4:71891631-71892511:+|nuORF 47.7319792270244 0.0453426645642791 2 [YE]S[VG]KD{M(Oxidation (M))|F}S{I|L} 10 7 + 42.598 0.0 0.0 3.725 3.725 68.32 0.0 0.0 0.0 1.1696871556164012 0.6812779123253421 0.6812779123253421 0.7255998297264199 0 0.8494850021680094 1.0 0.0 0.0 [YE]S[VG]KD{M(Oxidation (M))|F}S{I|L};[YE]S[VG]KS{M(Oxidation (M))|F}D{I|L};D{M(Oxidation (M))|F}{I|L}[RP][C(Carbamidomethyl (C))H]S{I|L};[{M(Oxidation (M))|F}V][YT]KDRC{I|L};[YE]S{[QD]|[EN]|[WG]|[KD]|[RS]}K{M(Oxidation (M))|F}D{I|L};[YE]S[VG]SK{M(Oxidation (M))|F}D{I|L};{[TV]|[{I|L}S]}[MT]CSR{M(Oxidation (M))|F}S{I|L};[YE]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}R{M(Oxidation (M))|F}S{I|L};[YE]{[NV]|[RG]}K[YE]S{I|L};[YE]S{[QD]|[EN]|[WG]|[KD]|[RS]}[VG]{M(Oxidation (M))|F}S{I|L} 3.725;3.6616;3.4718;3.4579;3.2844;3.2444;3.2386;3.2386;2.72;2.5426 -;-;-;-;-;-;-;-;-;- 858 1 1.869 52555.8 1.0 2963 3399 6357 DOHH2_400M_050219_2,6364 DOHH2_400M_050219_2,6364,DFKDKYESL True True DFKDKYESL 34.065411 572.779467761517 12230618.0 6357.0 ENST00000509764.1_1_4:71891631-71892511:+|nuORF;;ENSG00000156136|ENST00000286648|DCK 6.741274833679199 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6365 34.067 69.0 997130.0 25 0 185570.0 + 16678 KENPSSQYW 9 80 569.7614491992775 1137.508345465355 2 569.7617065310478 MULTI CID FTMS 0 0 0 6357 703620.875 1.0 0 0.0 8 Unmodified _KENPSSQYW_ ENSG00000112312|ENST00000230056|GMNN 47.74868867922204 0.0453060283459952 2 SQYW 4 5 53.092 0.0 0.0 4.6674 0.0 0.0 555.2726917951187 0.0 555.2726917951187 0.0 40.32755608235508 0.0 0.0 0 0.9247425010840048 0.0 0.7302046884880937 0.8494850021680094 + SQYW 4.6674 + + 85 1 1.869 58785.2 1.0 2964 3399 6357 DOHH2_400M_050219_2,6365 DOHH2_400M_050219_2,6365,KENPSSQYW True True KENPSSQYW 34.067065 569.761706531048 3923120.5 6357.0 ENSG00000112312|ENST00000230056|GMNN 6.9421108563741045 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6366 34.069 109.0 804080.0 25 0 61966.0 + 45272 YSDKYFDEHY 10 101 683.7831317514245 1365.551710569649 2 683.7833740115166 MULTI CID FTMS 0 0 0 6357 596933.6875 0.4106961686373701 -1 0.139312744140625 9 Unmodified _YSDKYFDEHY_ chr9:89311345-89315170|10|74.8|0.14|9.01|+|1|None,CKS2|1;ENSG00000123975|ENST00000314355|CKS2 102.46300108867192 0.0074641632262587 2 YSDKY{M(Oxidation (M))|F}DEHY 10 0 + 132.4 0.0 0.0 9.6958 9.6958 90.245 0.0 0.0 0.0 36.53212513775344 6.495649986126637 6.495649986126637 6.495649986126637 0 3.2658715643802765 2.0 1.1307196863200843 0.0 + + YSDKY{M(Oxidation (M))|F}DEHY;YSDKY{M(Oxidation (M))|F}DEYH;YSDKY{M(Oxidation (M))|F}DYEH;YSDKY{M(Oxidation (M))|F}[EC]S[QP];{[{M(Oxidation (M))|F}C]|[YS]}DKY{M(Oxidation (M))|F}DEHY;{[QD]|[EN]|[WG]|[KD]|[RS]}SYY{M(Oxidation (M))|F}DEHY;{[QD]|[EN]|[WG]|[KD]|[RS]}YSY{M(Oxidation (M))|F}DEHY;{[{M(Oxidation (M))|F}C]|[YS]}DYK{M(Oxidation (M))|F}DEHY;YHM[QP]{M(Oxidation (M))|F}DEHY;{[{M(Oxidation (M))|F}C]|[YS]}M{M(Oxidation (M))|F}K{M(Oxidation (M))|F}DEHY 9.6958;9.2202;8.4005;6.5658;6.296;5.9715;5.9005;5.8029;5.2165;5.1808 +;-;-;-;+;-;-;-;-;- + 2837 + 1 1.869 69848.3 1.0 2965 3399 6357 DOHH2_400M_050219_2,6366 DOHH2_400M_050219_2,6366,YSDKYFDEHY True True YSDKYFDEHY 34.069377 683.783374011517 39377001.0 6357.0 chr9:89311345-89315170|10|74.8|0.14|9.01|+|1|None,CKS2|1;;ENSG00000123975|ENST00000314355|CKS2 12.32552178700765 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6367 34.072 115.0 663450.0 25 0 105620.0 -1 GLYHFCLY 8 88 536.7497607615971 1071.4849685899942 2 536.7498657107353 MULTI CID FTMS 0 0 0 6357 562754.6875 0.7384817813698772 -1 0.139312744140625 10 Carbamidomethyl (C) _GLYHFC(Carbamidomethyl (C))LY_ ENSG00000205336|ENST00000562631|ADGRG1;ENST00000564907.5_1_16:57684180-57697491:+|nuORF;ENST00000564912.5_1_16:57684199-57687923:+|nuORF;ENST00000565539.5_1_16:57684180-57697491:+|nuORF;nc|ENSG00000205336|Q9Y653-3|ADGRG1;nc|ENSG00000205336|Q9Y653|ADGRG1 32.45364647766026 0.3613649037604678 2 {[VA]|[{I|L}G]}DPT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}Y 9 -1 + 71.832 0.0 0.0 6.7039 6.7039 94.432 0.0 0.0 0.0 61.65423722065668 14.09256854528806 14.09256854528806 31.68884254175176 0 1.6237125054200234 2.0 0.3252574989159953 0.0 {[VA]|[{I|L}G]}DPT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}Y;{[VA]|[{I|L}G]}DYG{[QS]|[NT]}G{I|L}Y;{[VA]|[{I|L}G]}DYG[YT]N{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}DYG{[QS]|[NT]}Y{[VA]|[{I|L}G]};[DV]{[YD]|[{M(Oxidation (M))|F}M]}D{I|L}G{I|L}Y;[DV]AYG{[QS]|[NT]}G{I|L}Y;[PS]TYG{[QS]|[NT]}G{I|L}Y;[DV]{[YD]|[{M(Oxidation (M))|F}M]}{[RE]|[WV]}{I|L}Y;[DV][YQ]{[QS]|[NT]}G{I|L}Y 6.7039;3.7465;2.1751;2.1126;1.1803;1.1323;0.7609;0.34067;0.03995 -;-;-;-;-;-;-;-;- 210 + 1 1.869 64036.3 1.0 2966 3399 6357 DOHH2_400M_050219_2,6367 DOHH2_400M_050219_2,6367,GLYHFCLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6368 34.074 80.0 570150.0 25 0 38084.0 + 42383 VTDPSTLEQY 10 96 576.7749145035236 0 576.7750732302666 PEAK CID FTMS 0 0 0 6357 555942.125 1.0 0 0.0 11 Unmodified _VTDPSTLEQY_ ENSG00000197081|ENST00000356956|IGF2R 54.773552608820026 0.0314789845654039 2 Q 1 9 8.9794 0.0 0.0 0.77978 0.0 0.0 842.4023242689628 178.05152307681877 1020.4538473457816 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 + Q 0.77978 + + 102 + 1 1.869 41524.4 1.0 2967 3399 6357 DOHH2_400M_050219_2,6368 DOHH2_400M_050219_2,6368,VTDPSTLEQY True True VTDPSTLEQY 34.073619 576.775073230267 3440718.25 6357.0 ENSG00000197081|ENST00000356956|IGF2R 5.340137322743733 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6369 34.076 121.0 820100.0 25 0 47605.0 + 29005 QEAGIKTAF 9 122 482.7586530245729 963.5027531159458 2 482.7585937380791 MULTI CID FTMS 0 0 0 6357 551571.6875 0.2833384606306081 -1 0.139312744140625 12 Unmodified _QEAGIKTAF_ ENSG00000128050|ENST00000512576|PAICS 51.629811660486645 0.0367964933207742 2 ATK{I|L}MA{M(Oxidation (M))|F} 7 6 36.987 0.0 0.0 3.8388 0.0 0.0 183.0883105687497 0.0 183.0883105687497 0.0 7.31987432075713 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3054621874040891 ATK{I|L}MA{M(Oxidation (M))|F} 3.8388 - 715 + 1 1.869 80311.5 1.0 2968 3399 6357 DOHH2_400M_050219_2,6369 DOHH2_400M_050219_2,6369,QEAGIKTAF True True QEAGIKTAF 34.076121 482.758593738079 18340530.0 6357.0 ENSG00000128050|ENST00000512576|PAICS 6.323693752288818 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6370 34.077 46.0 2122200.0 25 0 203690.0 + 24358 MEPSTAARAW 10 112 560.2672678053113 1118.5199826774226 2 560.2673828005791 MULTI CID FTMS 0 0 0 6357 390264.21875 1.0 0 0.0 13 Unmodified _MEPSTAARAW_ ENSG00000244038|ENST00000602624|DDOST;ENST00000477229.1_1_1:20987242-20987843:-|nuORF;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 23.78978130925829 0.4341852049148378 2 [PS]{[YD]|[{M(Oxidation (M))|F}M]}DG{I|L}{I|L} 8 8 37.755 0.0 0.0 3.3754 0.0 0.0 0.0 255.0947887072905 255.0947887072905 4.4922089232343225 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.7198565171985376 0.0 [PS]{[YD]|[{M(Oxidation (M))|F}M]}DG{I|L}{I|L} 3.3754 - 750 1 1.869 80354.4 1.0 2969 3399 6357 DOHH2_400M_050219_2,6370 DOHH2_400M_050219_2,6370,MEPSTAARAW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6371 34.08 151.0 384450.0 25 0 35041.0 + 25167 MSDVVKGVY 9 98 499.2556805401072 0 499.2544738650322 PEAK CID FTMS 0 0 0 6357 306552.0625 1.0 0 0.0 14 Unmodified _MSDVVKGVY_ ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-5|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4 39.94969957227396 0.061964645358372 2 VSDVGVG 7 4 17.477 0.0 0.0 1.7538 0.0 0.0 312.11602309017684 68.05150018863515 380.167523278812 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.3054621874040891 0.0 VSDVGVG 1.7538 - 250 + 1 1.869 49037.6 1.0 2970 3399 6357 DOHH2_400M_050219_2,6371 DOHH2_400M_050219_2,6371,MSDVVKGVY True True MSDVVKGVY 34.080379 499.254473865032 1599207.125 6357.0 nc|ENSG00000161813|Q71RC2-4|LARP4;;nc|ENSG00000161813|Q71RC2-3|LARP4;;nc|ENSG00000161813|Q71RC2-2|LARP4;;nc|ENSG00000161813|Q71RC2-5|LARP4;;nc|ENSG00000161813|Q71RC2-6|LARP4;;ENSG00000161813|ENST00000398473|LARP4 6.047736167907715 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6372 34.086 335.0 406610.0 25 0 29507.0 + 36573 TALKKYVL 8 136 468.30013416371713 934.5857153942344 2 468.3001891970634 MULTI CID FTMS 0 0 0 6357 234863.625 0.859075625977666 -1 0.139312744140625 15 Unmodified _TALKKYVL_ ENSG00000127483|ENST00000438032|HP1BP3;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;nc|ENSG00000127483|Q5SSJ5-3|HP1BP3 56.17704186161178 0.1143274477948619 2 TA{I|L}KKYV{I|L} 8 0 + 71.894 0.0 0.0 7.6926 7.6926 94.545 0.0 0.0 0.0 19.466289044458165 12.914930551903224 12.914930551903224 14.765921278232597 0 1.977818359011536 2.0 0.0 0.0 + + TA{I|L}KKYV{I|L};[TA]{I|L}KKYV{I|L};[YV]KK{I|L}AT{I|L};[YV]KK[VS]V{I|L};[K{I|L}]KYVAT{I|L};[{I|L}A]TKKYV{I|L};KK{I|L}YVAT{I|L};TRRKYV{I|L};[R{M(Oxidation (M))|F}]{I|L}KKM{I|L};[K{I|L}]KY[TA]V{I|L} 7.6926;6.1126;5.0267;4.2133;3.7193;3.4192;3.0751;3.0242;2.9981;2.9059 +;+;-;-;-;-;-;-;-;- + 397 + 1 1.869 108179.6 1.0 2971 3399 6357 DOHH2_400M_050219_2,6372 DOHH2_400M_050219_2,6372,TALKKYVL True True TALKKYVL 34.08645 468.300189197063 1339437.0 6357.0 nc|ENSG00000127483|Q5SSJ5-3|HP1BP3;;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;;ENSG00000127483|ENST00000438032|HP1BP3 3.6792166233062735 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6373 34.091 273.0 369360.0 25 0 41675.0 -1 0 141 382.1862490943894 381.1789726277894 1 382.1879150271416 MULTI CID FTMS 0 0 0 6357 234538.71875 0.6226143761353744 -1 0.139312744140625 16 2 C{I|L} 2 -1 14.949 0.0 0.0 3.9216 0.0 0.0 147.07798798599094 0.0 147.07798798599094 0.0 3.2997294821715606 0.0 0.0 0 0.0 0.0 0.0 0.0 C{I|L} 3.9216 - 29 + 1 1.869 81881.3 1.0 2972 3399 6357 DOHH2_400M_050219_2,6373 DOHH2_400M_050219_2,6373, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6374 34.096 215.0 474550.0 25 0 28540.0 + 29036 QEFGVPHQY 9 113 552.759531956976 1103.504510980752 2 552.7590820193291 MULTI CID FTMS 0 0 0 6357 210730.96875 0.3546985016632464 -2 0.2874870300292969 17 Unmodified _QEFGVPHQY_ ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-3|OGA 61.357469665136826 0.0253304979873734 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}GVPHQY 9 0 + 48.655 0.0 0.0 4.4092 4.4092 70.001 0.0 0.0 0.0 18.812281309285623 14.09256854528806 14.09256854528806 0.4575749056067479 0 0.2742275032520141 0.0 0.0 0.6861818737241735 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}GVPHQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RPHQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}GVPH[AG]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RPH[AG]Y;[Y{M(Oxidation (M))|F}][H{I|L}]PHQY;[QA]{[{M(Oxidation (M))|F}D]|MM}VPHQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}GV[WQ][NP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}R[WQ][NP];{[VA]|[{I|L}G]}E{M(Oxidation (M))|F}P[H{I|L}]EY;[QA]QH{I|L}[EC]{I|L}Y 4.4092;4.3677;2.9529;2.9065;2.8731;2.7343;2.0402;1.9988;1.9174;1.7518 +;-;-;-;-;-;-;-;-;- + 800 + 1 1.869 82295.3 1.0 2973 3399 6357 DOHH2_400M_050219_2,6374 DOHH2_400M_050219_2,6374,QEFGVPHQY True True QEFGVPHQY 34.095577 552.759082019329 8360045.0 6357.0 ENSG00000198408|ENST00000361464|OGA;;nc|ENSG00000198408|O60502-3|OGA 8.866641362508139 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6375 34.102 348.0 777030.0 25 0 60229.0 + 3201 AVYDYQGEGS 10 162 363.4905873377796 1087.449932613539 3 363.4903442263603 MULTI CID FTMS 0 0 0 6357 198399.875 0.6066481949462451 -1 0.139312744140625 18 Unmodified _AVYDYQGEGS_ ENSG00000180353|ENST00000314583|HCLS1 26.268140514670165 0.3785003716575977 2 AVDY 4 6 61.23 0.0 0.0 5.6306 0.0 0.0 0.0 636.232125717774 636.232125717774 47.73509716672216 0.0 0.0 0.0 0 0.6549471895720985 2.0 0.4247425010840047 0.0 AVDY 5.6306 - 509 + 1 1.869 220047.6 1.0 2974 3399 6357 DOHH2_400M_050219_2,6375 DOHH2_400M_050219_2,6375,AVYDYQGEGS False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6376 34.116 800.0 138600.0 25 0 10626.0 + 10976 GAQISAEEEPW 11 143 608.775000257843 1215.535447582486 2 608.7744628787041 MULTI CID FTMS 0 0 0 6357 99163.125 1.0 0 0.0 19 Unmodified _GAQISAEEEPW_ REV__ENSG00000198932|ENST00000537097|GPRASP1 18.1463463914782 0.6576820063886638 2 [AG]QQNQEQQW 10 -1 + 55.966 0.0 0.0 4.6043 4.6043 71.569 0.0 0.0 0.0 10.925781913000456 12.134884010026177 10.925781913000456 0.8984769166225348 0 0.4247425010840047 1.6989700043360187 0.3252574989159953 1.6307196863200843 [AG]QQNQEQQW;[AG]QQNQEAANW;[AG]QKM[HC]QQW;[AG]QKMQ[HC]QW;[AG]QQNQEQ[AG]W;[AG]QQNQE[AG]QW;[AG]QQN[AG]EQQW;[AG]QQGGQEQQW;[AG]Q[AG]NQEQQW;[AG]W[PS]QEQQW 4.6043;4.5303;3.9641;3.8811;3.8503;3.8503;3.8503;3.8503;3.8503;3.7989 -;-;-;-;-;-;-;-;-;- 5180 1 1.869 85367.1 0.6499999761581421 2975 3399 6357 DOHH2_400M_050219_2,6376 DOHH2_400M_050219_2,6376,GAQISAEEEPW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6377 34.13 800.0 143590.0 25 0 12010.0 + -1 SWHKMWREWWM 11 115 852.884985082006 1703.755417230812 2 852.8837768435478 MULTI CID FTMS 0 0 0 6357 92914.109375 0.6591267364902087 -1 0.139312744140625 20 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SWHKMWREWWM_ REV__ENST00000301180.9_1_12:51133363-51135252:+|nuORF 1.1933415558491238 0.8695176722560516 2 {[HG]|PP}D{M(Oxidation (M))|F}ANQQ[MT]NQWQ 14 -1 {[HG]|PP}D + + 89.686 7.3242 2.3693 5.264 5.264 56.524 0.0 0.0 0.0 0.0 75.37218120757178 0.0 0.0 0 1.0 0.0 0.7742275032520141 2.1747425010840047 {[HG]|PP}D{M(Oxidation (M))|F}ANQQ[MT]NQWQ 5.264 - 6070 + 1 1.869 81323.6 0.6299999952316284 2976 3399 6357 DOHH2_400M_050219_2,6377 DOHH2_400M_050219_2,6377,SWHKMWREWWM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6379 34.147 800.0 156220.0 25 0 13892.0 + -1 QEQECGSCPPC 11 118 676.2395614204719 1350.4645699077437 2 676.2397338747978 MULTI CID FTMS 0 0 0 6378 123738.578125 0.6952232263214038 1 -0.1209640502929687 1 3 Carbamidomethyl (C) _QEQEC(Carbamidomethyl (C))GSC(Carbamidomethyl (C))PPC(Carbamidomethyl (C))_ REV__MER52D_dup518|chr14:71230781-71232935:+|1.82709249221962|0.0272404342012767|6.07|46.0|61|1|anti-sense 5.731851221503515 0.8481046878870278 2 WDKYCHY 7 -1 36.675 0.0 0.0 2.7157 0.0 0.0 337.0578054782053 0.0 337.0578054782053 0.0 15.919822175867424 0.0 0.0 0 0.0 0.0 0.0 0.0 WDKYCHY 2.7157 - 711 + 1 1.86 93249.4 0.9200000166893004 2977 3400 6378 DOHH2_400M_050219_2,6379 DOHH2_400M_050219_2,6379,QEQECGSCPPC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6380 34.148 8.7 8521900.0 25 0 1100600.0 + 7069 EELLGDGHSY 10 89 560.2511627305616 1118.4877725279232 2 560.2505981326103 MULTI CID FTMS 0 0 0 6378 6192056.5 0.3479324951937767 -1 0.0766258239746093 2 Unmodified _EELLGDGHSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000495288.5_1_1:151372054-151373071:+|nuORF 96.28474662873226 0.0088832290995439 2 EE{I|L}{I|L}GDG 7 3 66.38 0.0 0.0 5.9348 0.0 0.0 0.0 402.1428621881469 402.1428621881469 33.22489933722109 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 1.5189301784845295 0.0 + EE{I|L}{I|L}GDG 5.9348 + + 517 + 1 1.86 62042.0 1.0 2978 3400 6378 DOHH2_400M_050219_2,6380 DOHH2_400M_050219_2,6380,EELLGDGHSY True True EELLGDGHSY 34.147925 560.25059813261 349252000.0 6378.0 ENST00000495288.5_1_1:151372054-151373071:+|nuORF;;ENSG00000159377|ENST00000290541|PSMB4;;ENST00000474100.1_1_1:151372658-151373852:+|nuORF 9.360180854797363 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6381 34.149 35.0 1424000.0 25 0 82201.0 + 32929 SELDRINAQY 10 86 604.799982434196 1207.5854119351918 2 604.7992431521416 MULTI CID FTMS 0 0 0 6378 1290842.375 1.0 0 0.0 3 Unmodified _SELDRINAQY_ ENSG00000092036|ENST00000541587|HAUS4;ENST00000554063.1_1_14:23416808-23417238:-|nuORF;nc|ENSG00000092036|Q9H6D7-2|HAUS4;nc|ENSG00000092036|Q9H6D7-3|HAUS4;nc|ENSG00000092036|Q9H6D7-4|HAUS4 55.23464941255904 0.0494277333541689 2 {I|L}NAQY 5 5 35.745 0.0 0.0 2.9601 0.0 0.0 600.2864077476227 0.0 600.2864077476227 0.0 21.7659970366416 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {I|L}NAQY 2.9601 + + 245 1 1.86 40309.4 1.0 2979 3400 6378 DOHH2_400M_050219_2,6381 DOHH2_400M_050219_2,6381,SELDRINAQY True True SELDRINAQY 34.149104 604.799243152142 5895196.5 6378.0 ENSG00000092036|ENST00000541587|HAUS4;;nc|ENSG00000092036|Q9H6D7-2|HAUS4;;nc|ENSG00000092036|Q9H6D7-4|HAUS4;;ENST00000554063.1_1_14:23416808-23417238:-|nuORF;;nc|ENSG00000092036|Q9H6D7-3|HAUS4 6.808608214060466 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6382 34.15 48.0 2153100.0 25 0 268540.0 + 16049 ITKYTKWIK 9 105 394.2411698916841 1179.7016802752523 3 394.2412597537041 MULTI CID FTMS 0 0 0 6378 1218492.0 0.1026570013714088 -1 0.0766258239746093 4 Unmodified _ITKYTKWIK_ nc|ENSG00000188086|Q7RTY3-2|PRSS45P;nc|ENSG00000188086|Q7RTY3|PRSS45P 37.97399986684836 0.0865783450051559 2 TT{I|L}KY{I|L}WKK 9 5 + 89.148 0.0 0.0 7.5568 7.5568 97.246 0.0 0.0 0.0 66.02736192306196 17.230749808046326 17.230749808046326 63.96713777483761 0 0.6307196863200843 1.5228787452803376 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK;KKH{[QS]|[NT]}KK{I|L}[PS];[W{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]K{I|L}[PS];[W{I|L}][VP][Q{I|L}]K{I|L}[PS];[VP][W{I|L}][Q{I|L}]K{I|L}[PS] 7.5568;2.1345;0.43543;0.43543;0.2567 -;-;-;-;- 399 + 1 1.86 87158.9 1.0 2980 3400 6378 DOHH2_400M_050219_2,6382 DOHH2_400M_050219_2,6382,ITKYTKWIK True False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6383 34.152 41.0 1074200.0 25 0 119230.0 38912 TVLGDAFKECF 11 83 410.5353232131279 1228.5841402395836 3 410.5353576540947 MULTI CID FTMS 0 0 0 6378 1060638.75 0.5020597496017597 -1 0.0766258239746093 5 Unmodified _TVLGDAFKECF_ ENSG00000107201|ENST00000379883|RIGI;nc|ENSG00000107201|O95786-2|RIGI 8.745405648335112 0.8338865417133445 2 V 1 10 13.979 0.0 0.0 1.1378 0.0 0.0 1111.5045789376288 0.0 1111.5045789376288 0.0 0.2633927738984436 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1378 + + 104 + 1 1.86 41828.4 1.0 2981 3400 6378 DOHH2_400M_050219_2,6383 DOHH2_400M_050219_2,6383,TVLGDAFKECF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6384 34.153 70.0 1366300.0 25 0 91589.0 + 632 AELDRQIKSF 10 108 402.8873443871574 1205.6402037616722 3 402.8872253298759 MULTI CID FTMS 0 0 0 6378 766697.25 0.2323051161544896 -1 0.0766258239746093 6 Unmodified _AELDRQIKSF_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 31.635753872319068 0.2578985419642538 2 AE{I|L}R{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}KS{M(Oxidation (M))|F} 10 3 + 68.682 0.0 0.0 5.6967 5.6967 85.32 0.0 0.0 0.0 44.95313236702216 7.061493513478361 7.061493513478361 9.164539485499256 0 0.3807196863200844 2.0 0.7742275032520141 0.0 AE{I|L}R{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}KS{M(Oxidation (M))|F};AE{I|L}[VG]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}KS{M(Oxidation (M))|F};{[CP]|[EA]}RR{I|L}EKAYA;{[CP]|[EA]}RR{I|L}KEAYA;A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SK{I|L}K[DP][PG];{[CP]|[EA]}RR{I|L}KS[{M(Oxidation (M))|F}E]A;AE[HD]R{I|L}RR[PG];{[CP]|[EA]}RR{I|L}TRAYA;{[CP]|[EA]}RRE{I|L}KAYA;[TA][DP]K{I|L}TRAYA 5.6967;4.9366;3.1915;3.1254;2.9976;2.7329;2.6293;2.626;2.5979;2.5585 -;-;-;-;-;-;-;-;-;- 1277 + 1 1.86 78327.2 1.0 2982 3400 6378 DOHH2_400M_050219_2,6384 DOHH2_400M_050219_2,6384,AELDRQIKSF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6385 34.155 102.0 662410.0 25 0 93641.0 + 42146 VSAEEALKY 9 100 505.2644010864617 1008.5142492397232 2 505.2650024294853 MULTI CID FTMS 0 0 0 6378 626327.0625 1.0 0 0.0 7 Unmodified _VSAEEALKY_ ENSG00000070061|ENST00000374647|ELP1 66.45667989310934 0.0225072657982126 2 VSAEEA{I|L}KY 9 0 + 80.536 0.0 0.0 7.9856 7.9856 97.142 0.0 0.0 0.0 59.37707207549607 11.706962271689749 11.706962271689749 33.70419729680272 0 0.7302046884880937 1.6989700043360187 0.7742275032520141 0.3252574989159953 + + VSAEEA{I|L}KY;VSA[PG][C(Carbamidomethyl (C))K]KY;VSA[HS]Q{[NV]|[RG]}[PA];VSA[HS]Q{[QV]|[N{I|L}]|[RA]|[KV]}[PG];VS[KP]K[C(Carbamidomethyl (C))H][PG];W[KP][C(Carbamidomethyl (C))K]KY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HC]A{I|L}KY;{[CP]|[EA]}{I|L}[YK]{M(Oxidation (M))|F}A[PA];[PA]A[RN]{[QN]|[E{I|L}]|[KN]}A[PA];{[SA]|[TG]}[Q{I|L}]Q[HS]A[PA] 7.9856;4.6436;3.3295;2.7812;2.044;1.9796;1.6468;1.1199;0.5507;0.51019 +;-;-;-;-;-;-;-;-;- + 416 + 1 1.86 55135.3 1.0 2983 3400 6378 DOHH2_400M_050219_2,6385 DOHH2_400M_050219_2,6385,VSAEEALKY True True VSAEEALKY 34.155387 505.265002429485 2710278.5 6378.0 ENSG00000070061|ENST00000374647|ELP1 7.024407068888347 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6386 34.157 67.0 873990.0 25 0 54996.0 -1 VAGMPQCFGY 10 84 544.7320140883262 1087.4494752434523 2 544.7322265505791 MULTI CID FTMS 0 0 0 6378 483167.0625 1.0 0 0.0 8 Oxidation (M) _VAGM(Oxidation (M))PQCFGY_ ENST00000257745.8_1_7:104654834-104681400:+|nuORF;ENST00000311117.7_1_7:104681304-104681400:+|nuORF 10.823927491677226 0.6659270209832991 2 {[VA]|[{I|L}G]}D 3 -1 26.572 0.0 0.0 2.4435 0.0 0.0 0.0 799.2952962599966 799.2952962599966 2.759373593845904 0.0 0.0 0.0 0 0.2134679910804404 2.0 0.0 0.0 {[VA]|[{I|L}G]}D 2.4435 - 65 + 1 1.86 50773.7 1.0 2984 3400 6378 DOHH2_400M_050219_2,6386 DOHH2_400M_050219_2,6386,VAGMPQCFGY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6387 34.159 73.0 800330.0 25 0 58535.0 + 16697 KESDPSKLQF 10 109 589.8076169066989 0 589.8065673708916 PEAK CID FTMS 0 0 0 6378 390442.875 1.0 0 0.0 9 Unmodified _KESDPSKLQF_ ENSG00000183624|ENST00000383463|HMCES 29.43715596616401 0.2222611817437702 2 SS{M(Oxidation (M))|F}T 4 8 18.047 0.0 0.0 1.5326 0.0 0.0 184.1436018780476 568.2525728815061 752.3961747595538 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SS{M(Oxidation (M))|F}T 1.5326 - 97 + 1 1.86 46408.4 1.0 2985 3400 6378 DOHH2_400M_050219_2,6387 DOHH2_400M_050219_2,6387,KESDPSKLQF False True KESDPSKLQF 34.158714 589.806567370892 2460730.75 6378.0 ENSG00000183624|ENST00000383463|HMCES 3.258784453074137 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6388 34.161 107.0 567230.0 25 0 74749.0 + 14662 IINTFHQY 8 76 518.2658906059283 1034.5172282786566 2 518.2661620974541 MULTI CID FTMS 0 0 0 6378 300152.0625 1.0 0 0.0 10 Unmodified _IINTFHQY_ ENSG00000163220|ENST00000368738|S100A9 37.97399986684836 0.2681860861828418 2 {I|L}{I|L}NT{M(Oxidation (M))|F}HQY 8 0 + 67.12 0.0 0.0 6.4881 6.4881 87.083 0.0 0.0 0.0 54.35591023669776 9.992369838338462 9.992369838338462 8.470325397914564 0 0.0 2.0 0.0 0.4247425010840047 + + {I|L}{I|L}NT{M(Oxidation (M))|F}HQY;{I|L}{I|L}NT{M(Oxidation (M))|F}G[HA]Y;{I|L}{I|L}NT{M(Oxidation (M))|F}H[AG]Y;{I|L}{I|L}GGT{M(Oxidation (M))|F}HQY;{I|L}{I|L}NT[KC]ASW;{I|L}{I|L}NT[KC]AC(Carbamidomethyl (C)){I|L};{I|L}{I|L}N[WP]{[ET]|[MV]}Y;{I|L}{I|L}GGT{M(Oxidation (M))|F}G[HA]Y;{I|L}{I|L}GGT{M(Oxidation (M))|F}H[AG]Y;{I|L}{I|L}GGT[KC]ASW 6.4881;5.6693;5.5928;5.5928;5.152;4.9171;4.4882;4.3686;4.2921;4.2619 +;-;-;-;-;-;-;-;-;- + 172 + 1 1.86 51827.8 1.0 2986 3400 6378 DOHH2_400M_050219_2,6388 DOHH2_400M_050219_2,6388,IINTFHQY False True IINTFHQY 34.160998 518.266162097454 992841.3125 6378.0 ENSG00000163220|ENST00000368738|S100A9 6.056399345397949 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6389 34.164 169.0 702270.0 25 0 81384.0 + 721 AEPLPRNGDQW 11 87 641.8122875110138 1281.6100220888277 2 641.8126098513603 MULTI CID FTMS 0 0 0 6378 262624.5 0.0921266995786017 -2 0.2159385681152343 11 Unmodified _AEPLPRNGDQW_ ENSG00000166483|ENST00000450114|WEE1;nc|ENSG00000166483|P30291-2|WEE1 30.7034409873982 0.3712764582118616 2 {[CP]|[EA]}P{I|L} 4 7 24.693 0.0 0.0 1.9267 0.0 0.0 0.0 868.3723150837903 868.3723150837903 0.4710624853235146 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + {[CP]|[EA]}P{I|L} 1.9267 + + 73 + 1 1.86 92083.4 1.0 2987 3400 6378 DOHH2_400M_050219_2,6389 DOHH2_400M_050219_2,6389,AEPLPRNGDQW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6390 34.178 800.0 287900.0 25 0 17373.0 + -1 WLNQYCSHAFY 11 147 744.8249680672311 1487.635383201262 2 744.8245117068291 MULTI CID FTMS 0 0 0 6378 206667.890625 0.996465481527666 -1 0.0766258239746093 12 Carbamidomethyl (C) _WLNQYC(Carbamidomethyl (C))SHAFY_ REV__ENSG00000091128|ENST00000388781|LAMB4;REV__ENST00000475469.1_1_7:107703197-107763609:-|nuORF;REV__nc|ENSG00000091128|A4D0S4-3|LAMB4 20.41453444215458 0.6105011870913812 2 {[DA]|[EG]}{[ET]|[MV]}TEAQQDA{M(Oxidation (M))|F}Y 13 -1 + 108.09 0.0 0.0 7.2658 7.2658 83.213 0.0 0.0 0.0 1.3688096087618504 46.05826874021138 1.3688096087618504 2.887254899964361 0 1.3807196863200843 1.154901959985743 1.8556270500406933 1.274227503252014 {[DA]|[EG]}{[ET]|[MV]}TEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{M(Oxidation (M))|F}[PS]EAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{[ET]|[MV]}TEA[AG]QDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{[ET]|[MV]}TEAQ[AG]DA{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}DEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{M(Oxidation (M))|F}[PS]EA[AG]QDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{M(Oxidation (M))|F}[PS]EAQ[AG]DA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{[ET]|[MV]}TEAQQW{M(Oxidation (M))|F}Y 7.2658;7.0717;6.9311;6.7137;6.6559;6.6559;6.4744;6.4618;6.4618;6.358 -;-;-;-;-;-;-;-;-;- 20751 1 1.86 161057.7 0.9300000071525574 2988 3400 6378 DOHH2_400M_050219_2,6390 DOHH2_400M_050219_2,6390,WLNQYCSHAFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6391 34.183 253.0 203180.0 25 0 28373.0 + 34684 SPQGRVMTI 9 86 494.7664856763847 0 494.7663757205009 PEAK CID FTMS 0 0 0 6378 192407.53125 1.0 0 0.0 13 Unmodified _SPSPRCKTL_ ENSG00000169564|ENST00000303577|PCBP1 32.78568957990786 0.0971838787772021 2 PQ 2 8 18.583 0.0 0.0 1.8818 0.0 0.0 87.03216624068689 672.352210710381 759.3843769510679 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3807196863200844 PQ 1.8818 - 27 + 1 1.86 45187.3 1.0 2989 3400 6378 DOHH2_400M_050219_2,6391 DOHH2_400M_050219_2,6391,SPSPRCKTL True False SPQGRVMTI 34.182868 494.766375720501 522892.15625 6378.0 ENSG00000169564|ENST00000303577|PCBP1 5.826021830240886 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6392 34.197 800.0 164040.0 25 0 9689.0 -1 CHCIFHWCCYV 11 128 821.3136074702786 1640.6126620073571 2 821.3145629763603 MULTI CID FTMS 0 0 0 6378 180960.5625 0.5412309837399978 -1 0.0766258239746093 14 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))HC(Carbamidomethyl (C))IFHWC(Carbamidomethyl (C))C(Carbamidomethyl (C))YV_ ENSG00000108379|ENST00000225512|WNT3 1.4819007175156935 0.86815623132643 2 [YE]T{M(Oxidation (M))|F}{M(Oxidation (M))|F}CE{[QS]|[NT]}EP{[{M(Oxidation (M))|F}D]|MM} 13 -1 + 49.2 0.0 0.0 2.9989 2.9989 48.853 0.0 0.0 0.0 3.2783248807594845 0.0 0.0 0.0 0 1.1677353201839438 1.3010299956639813 0.7302046884880937 0.4247425010840047 [YE]T{M(Oxidation (M))|F}{M(Oxidation (M))|F}CE{[QS]|[NT]}EP{[{M(Oxidation (M))|F}D]|MM};[YE]T{M(Oxidation (M))|F}{M(Oxidation (M))|F}CE[KS]EP{[{M(Oxidation (M))|F}D]|MM};[{M(Oxidation (M))|F}T]EY{M(Oxidation (M))|F}CE[KS]EP{[{M(Oxidation (M))|F}D]|MM};[{M(Oxidation (M))|F}T]EY{M(Oxidation (M))|F}CE{[QS]|[NT]}EP[YV];[YE]T{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}Y{M(Oxidation (M))|F}YP{[{M(Oxidation (M))|F}D]|MM};[{M(Oxidation (M))|F}T]EY{[{M(Oxidation (M))|F}C]|[YS]}Y{M(Oxidation (M))|F}YP{[{M(Oxidation (M))|F}D]|MM};{[ET]|[MV]}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}CE[KS]EP{[{M(Oxidation (M))|F}D]|MM};{[ET]|[MV]}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}CE{[QS]|[NT]}EP[YV];[YE]T{M(Oxidation (M))|F}{M(Oxidation (M))|F}CT{[QD]|[EN]|[WG]|[KD]|[RS]}EP[YV];[{M(Oxidation (M))|F}T]EY{M(Oxidation (M))|F}CEY{[YD]|[{M(Oxidation (M))|F}M]}{[{M(Oxidation (M))|F}D]|MM} 2.9989;2.9989;2.7991;2.7991;2.7041;2.5043;2.4994;2.4994;2.4951;2.4401 -;-;-;-;-;-;-;-;-;- 2087 1 1.86 92862.2 0.8600000143051147 2990 3400 6378 DOHH2_400M_050219_2,6392 DOHH2_400M_050219_2,6392,CHCIFHWCCYV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6393 34.2 194.0 396170.0 25 0 45447.0 + 24833 MPKMDQDSL 9 110 532.7414919906299 0 532.7409545779228 PEAK CID FTMS 0 0 0 6378 179436.484375 0.3420400654966948 -1 0.0766258239746093 15 Unmodified _MPKMDQDSL_ ENSG00000079459|ENST00000220584|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 49.55428908609986 0.0328875595922215 2 {I|L}SDQDMP 7 6 34.105 0.0 0.0 3.2069 0.0 0.0 149.05154222571804 125.07254968814688 274.1240919138649 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 {I|L}SDQDMP 3.2069 - 643 + 1 1.86 66320.2 1.0 2991 3400 6378 DOHH2_400M_050219_2,6393 DOHH2_400M_050219_2,6393,MPKMDQDSL True True MPKMDQDSL 34.200458 532.740954577923 2970067.5 6378.0 ENSG00000079459|ENST00000220584|FDFT1;;nc|ENSG00000079459|P37268-5|FDFT1 5.789368152618408 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6394 34.215 800.0 127460.0 25 0 10929.0 36842 TELNNYLSI 9 151 533.7735832088263 1065.5326134844524 2 534.2725097537041 MULTI CID FTMS 0 0 0 6378 228835.4375 0.4355193276379316 -3 0.3641128540039062 16 Unmodified _TELNNYLSI_ ENSG00000134588|ENST00000511190|USP26 12.531546534597751 0.4974689918368763 2 {I|L}Y 2 7 14.693 0.0 0.0 1.3789 0.0 0.0 771.3741184666775 0.0 771.3741184666775 0.0 2.218487496163561 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y 1.3789 - 306 + 1 1.86 87439.2 1.0 2992 3400 6378 DOHH2_400M_050219_2,6394 DOHH2_400M_050219_2,6394,TELNNYLSI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6395 34.219 173.0 331230.0 25 0 43783.0 + 36758 TEAPGGYKF 9 86 485.2377630199592 968.4609731067184 2 485.7392150759697 MULTI CID FTMS 0 0 0 6378 190261.125 1.0 0 0.0 17 Unmodified _TEAPPVPVGC_ ENST00000576239.5_1_17:674543-685513:-|nuORF;nc|ENSG00000167699|Q9HC38|GLOD4;nc|ENSG00000167699|Q9HC38-3|GLOD4;ENSG00000167699|ENST00000301329|GLOD4 21.74664581756881 0.480091245866545 2 EERRPA[DP] 8 7 + 48.205 0.0 0.0 4.9775 4.9775 87.1 0.0 0.0 0.0 19.90230846886813 6.989700043360188 6.989700043360188 19.90230846886813 0 0.8807196863200843 2.0 0.2742275032520141 0.0 EERRPA[DP];{[ET]|[MV]}AP[YN]K{M(Oxidation (M))|F};[NP]Y[VP]PA[DP];{[ET]|[MV]}AP[VP][QP]M;{[QN]|[E{I|L}]|[KN]}[KP]CPA[DP];{[ET]|[MV]}A[RH][QP]M;[TA]{[DS]|[MA]|[CV]|TT}[VP]PA[DP];[NP]YK[HV][DP];{[ET]|[MV]}A[RH]{[DS]|[MA]|[CV]|TT}[PG];{[ET]|[MV]}[RD]{[CA]|SS}K{M(Oxidation (M))|F} 4.9775;2.9224;2.4946;2.4255;1.912;1.7566;1.0269;0.62908;0.35241;0.18229 -;-;-;-;-;-;-;-;-;- 140 1 1.86 51055.8 1.0 2993 3400 6378 DOHH2_400M_050219_2,6395 DOHH2_400M_050219_2,6395,TEAPPVPVGC False False TEAPGGYKF 34.218839 485.73921507597 2463289.75 6378.0 ENST00000576239.5_1_17:674543-685513:-|nuORF;;nc|ENSG00000167699|Q9HC38|GLOD4;;nc|ENSG00000167699|Q9HC38-3|GLOD4;;ENSG00000167699|ENST00000301329|GLOD4 6.040689945220947 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6396 34.222 136.0 624530.0 25 0 142360.0 5424 DLLSRTAV 8 83 437.7531845946529 873.4918162561057 2 437.7534973025322 MULTI CID FTMS 0 0 0 6378 133221.828125 0.1220602008876088 -1 0.0766258239746093 18 Unmodified _DLLSRTAV_ ENSG00000178149|ENST00000341949|DALRD3;ENST00000460505.5_1_3:49053023-49053570:-|nuORF;ENST00000481001.5_1_3:49053078-49053570:-|nuORF;ENST00000498498.5_1_3:49053078-49053570:-|nuORF;ENST00000498794.1_1_3:49053195-49053570:-|nuORF;nc|ENSG00000178149|Q5D0E6-4|DALRD3 26.88365393820708 0.4786498634179528 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}S 4 4 42.435 0.0 0.0 4.8581 0.0 0.0 0.0 442.2423494928344 442.2423494928344 19.31917438353821 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 + {NN|[MP]|[D{I|L}]|[EV]}{I|L}S 4.8581 + + 72 + 1 1.86 70591.7 1.0 2994 3400 6378 DOHH2_400M_050219_2,6396 DOHH2_400M_050219_2,6396,DLLSRTAV False True DLISRTAV 34.221593 437.753497302532 6555571.5 6378.0 ENSG00000115524|ENST00000335508|SF3B1 2.2556095123291016 2.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6397 34.235 800.0 181370.0 25 0 12841.0 -1 HLLWFEQWCLQ 11 142 780.3794519016923 0 780.3787719607353 PEAK CID FTMS 0 0 0 6378 139923.96875 0.660885889703301 -1 0.0766258239746093 19 Carbamidomethyl (C) _HLLWFEQWC(Carbamidomethyl (C))LQ_ ENSG00000142207|ENST00000382751|URB1 15.248480904072842 0.4017935032673427 2 N{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L} 11 -1 86.068 0.0 0.0 5.5217 0.0 0.0 97.06257086202125 143.04668604068596 240.1092569027072 0.0 0.0 0.0 0.0 0 3.667735320183944 0.0 1.2416440611282626 1.1549471895720984 N{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L} 5.5217 - 10215 + 1 1.86 100994.3 0.7300000190734863 2995 3400 6378 DOHH2_400M_050219_2,6397 DOHH2_400M_050219_2,6397,HLLWFEQWCLQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6398 34.25 800.0 378300.0 25 0 81631.0 43505 WWWWIWWQWW 10 119 874.9037639281709 1747.7929749231416 2 874.9029418826103 MULTI CID FTMS 0 0 0 6378 115226.0703125 0.0442995309858356 -8 0.7052078247070312 20 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 2 [NP]E{I|L}A[NS][WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 13 + 73.667 0.0 0.0 4.2149 4.2149 73.323 0.0 0.0 0.0 12.24323368744212 7.617608341954735 7.617608341954735 3.3756200458354044 0 1.0994850021680094 0.8538719643217619 1.055462187404089 0.4247425010840047 [NP]E{I|L}A[NS][WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]EA{I|L}[NS][WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]E{I|L}[NG]T[WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]EA[WK][WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]EAATAA[WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]EAAAAT[WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}EA[NS][WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[PG]GE{I|L}A[NS][WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]T[YQ]A[R{M(Oxidation (M))|F}]AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]EA{[NV]|[RG]}T[WH]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.2149;4.0217;3.6689;3.639;3.5867;3.5867;3.5719;3.5144;3.4942;3.4758 -;-;-;-;-;-;-;-;-;- 10077 1 1.86 203942.8 0.6800000071525574 2996 3400 6378 DOHH2_400M_050219_2,6398 DOHH2_400M_050219_2,6398,WWWWIWWQWW False False False False splicing PXD020620_cell_line DOHH2_400M_050219_2 6400 34.255 12.0 3758600.0 25 0 419280.0 + 2877 AVDPTSGQLY 10 74 525.7585991896497 1049.5026454460992 2 525.7589599490166 MULTI CID FTMS 0 0 0 6399 4192906.5 0.4258803390745341 1 -0.1156120300292968 1 Unmodified _AVDPTSGQLY_ ENSG00000132182|ENST00000254508|NUP210 27.628801355627647 0.3479284626772844 2 {[VA]|[{I|L}G]}D{[QG]|[NA]}D{I|L}G{I|L}Y 10 5 + 72.708 0.0 0.0 6.9279 6.9279 82.779 0.0 0.0 0.0 5.440680443502757 16.53212513775344 5.440680443502757 3.0102999566398125 0 1.424742501084005 1.6989700043360187 0.3054621874040891 0.0 {[VA]|[{I|L}G]}D{[QG]|[NA]}D{I|L}G{I|L}Y;{[VA]|[{I|L}G]}D{[QG]|[NA]}{I|L}DG{I|L}Y;{[VA]|[{I|L}G]}D{[QG]|[NA]}DAV{I|L}Y;[TP]S{[QG]|[NA]}D{I|L}G{I|L}Y;[TP]S{[QG]|[NA]}DAV{I|L}Y;[TP]S{[QG]|[NA]}{I|L}DG{I|L}Y;{[VA]|[{I|L}G]}Q[DG]D{I|L}G{I|L}Y;{[VA]|[{I|L}G]}Q[DG]DAV{I|L}Y;{[VA]|[{I|L}G]}Q[DG]{I|L}DG{I|L}Y;{[VA]|[{I|L}G]}QS[TP]DG{I|L}Y 6.9279;6.641;6.641;6.4095;6.1226;6.1226;5.8529;5.5661;5.5661;5.2793 -;-;-;-;-;-;-;-;-;- 336 1 1.845 40525.0 1.0 2997 3401 6399 DOHH2_400M_050219_2,6400 DOHH2_400M_050219_2,6400,AVDPTSGQLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6401 34.26 264.0 337810.0 25 0 22233.0 + 24477 MIEPRTLQY 9 110 583.797370107426 1165.580187281652 2 583.7972900271416 MULTI CID FTMS 0 0 0 6399 180060.421875 0.0772601758538058 2 -0.2390403747558593 2 Oxidation (M) _M(Oxidation (M))IEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 55.50274090549119 0.0285720310785888 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EPNKKQY 9 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} + + 45.767 23.724 9.1204 3.9266 3.9266 51.442 0.0 0.0 0.0 0.0 17.857441730892273 0.0 0.0 0 1.7302046884880935 0.0 0.3807196863200844 0.8494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EPNKKQY 3.9266 - 683 + 1 1.845 70381.9 1.0 2998 3401 6399 DOHH2_400M_050219_2,6401 DOHH2_400M_050219_2,6401,MIEPRTLQY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6402 34.261 25.0 2942900.0 25 0 304590.0 38632 TTIKAFFPKK 10 97 590.8579921454512 1179.7014313577024 2 590.8582031130791 MULTI CID FTMS 0 0 0 6399 2458662.25 1.0 0 0.0 3 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 40.23920728925047 0.1550410903091231 2 TT{I|L}KY{I|L}WKK 9 4 + 100.79 0.0 0.0 8.5434 8.5434 98.358 0.0 0.0 0.0 82.88155049864216 18.339993556128107 18.339993556128107 49.42593794827836 0 2.1747425010840047 1.2218487496163564 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK;{[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK;TT{I|L}K[RH][K{I|L}][PS];[K{I|L}]Y[W{I|L}]{[DS]|[MA]|[CV]|TT}KK 8.5434;4.3537;3.5769;0.030888 -;-;-;- 252 + 1 1.845 59060.9 1.0 2999 3401 6399 DOHH2_400M_050219_2,6402 DOHH2_400M_050219_2,6402,TTIKAFFPKK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6403 34.262 31.0 1795400.0 25 0 154730.0 + 634 AELDRQIKSF 10 80 603.8275490968016 1205.640545260403 2 603.8276855349541 MULTI CID FTMS 0 0 0 6399 1667859.5 1.0 0 0.0 4 Unmodified _AELDRQIKSF_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 39.41278653710922 0.1637679073694847 2 {[CP]|[EA]}RRK{[QG]|[NA]}KS{M(Oxidation (M))|F} 10 4 + 53.715 0.0 0.0 4.4553 4.4553 53.37 0.0 0.0 0.0 2.503859178250778 32.55658422928384 2.503859178250778 0.0 0 1.7059771852360797 0.0 0.0 0.0 {[CP]|[EA]}RRK{[QG]|[NA]}KS{M(Oxidation (M))|F};{[CP]|[EA]}RR{[CP]|[EA]}{I|L}KS{M(Oxidation (M))|F};{[CP]|[EA]}RR{I|L}{[CP]|[EA]}KS{M(Oxidation (M))|F};{[CP]|[EA]}[VG]R{[CP]|[EA]}{I|L}KS{M(Oxidation (M))|F};{[CP]|[EA]}R[VG]{[CP]|[EA]}{I|L}KS{M(Oxidation (M))|F};{[CP]|[EA]}R[VG]K{[QG]|[NA]}KS{M(Oxidation (M))|F};{[CP]|[EA]}[VG]RK{[QG]|[NA]}KS{M(Oxidation (M))|F};{[CP]|[EA]}RRK{I|L}{[CP]|[EA]}S{M(Oxidation (M))|F};{[CP]|[EA]}R[{I|L}A][DG]{I|L}KS{M(Oxidation (M))|F};{[CP]|[EA]}RR{I|L}[TA]RS{M(Oxidation (M))|F} 4.4553;4.4553;4.0596;3.6952;3.6952;3.6952;3.6952;3.6449;3.4835;3.3952 -;-;-;-;-;-;-;-;-;- 751 1 1.845 46350.7 1.0 3000 3401 6399 DOHH2_400M_050219_2,6403 DOHH2_400M_050219_2,6403,AELDRQIKSF False True AELDRQIKSF 34.262053 603.827685534954 37876013.5 6399.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 4.665874242782593 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6404 34.263 39.0 1118300.0 25 0 123500.0 + 5439 DLNMNITFYV 10 67 615.2986488346065 1228.582744736013 2 615.2987548708916 MULTI CID FTMS 0 0 0 6399 1537899.625 1.0 0 0.0 5 Unmodified _DLNMNITFYV_ REV__ENSG00000156253|ENST00000493196|RWDD2B;REV__ENST00000286777.6_1_21:30380429-30391601:-|nuORF;REV__ENST00000472184.1_1_21:30380697-30391601:-|nuORF 21.53697664764585 0.484802182336468 2 D{I|L}KE[MN]{[MS]|[{M(Oxidation (M))|F}A]}YV 10 -1 + 72.752 0.0 0.0 5.9217 5.9217 92.825 0.0 0.0 0.0 53.773043837969325 5.457574905606748 5.457574905606748 72.7524439246897 0 1.274227503252014 2.0 0.7614393726401688 0.0 D{I|L}KE[MN]{[MS]|[{M(Oxidation (M))|F}A]}YV 5.9217 - 123 + 1 1.845 38238.0 1.0 3001 3401 6399 DOHH2_400M_050219_2,6404 DOHH2_400M_050219_2,6404,DLNMNITFYV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6405 34.265 59.0 694130.0 25 0 55886.0 -1 0 58 918.4193950315004 1834.8242371298008 2 918.9220458865166 MULTI CID FTMS 0 0 0 6399 1013985.125 0.9333991739204076 1 -0.1156120300292968 6 2 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 23.109 0.0 0.0 1.2595 0.0 0.0 949.4619272762832 0.0 949.4619272762832 0.0 7.880325230808154 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 1.2595 - 216 1 1.845 34479.5 1.0 3002 3401 6399 DOHH2_400M_050219_2,6405 DOHH2_400M_050219_2,6405, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6406 34.271 345.0 380620.0 25 0 28622.0 + 36979 TFHQRGIAL 9 128 521.7929269868985 1041.5713010405968 2 521.7938720583916 MULTI CID FTMS 0 0 0 6399 262536.71875 1.0 0 0.0 7 Unmodified _TFHQRGIAL_ ENSG00000106263|ENST00000360876|EIF3B;ENST00000463026.5_1_7:2404000-2406084:+|nuORF;nc|ENSG00000106263|P55884-2|EIF3B 69.10491478415734 0.0214449631113747 2 T{M(Oxidation (M))|F}HQ 4 5 39.359 0.0 0.0 3.7789 0.0 0.0 0.0 525.3141573541624 525.3141573541624 5.477992154479722 0.0 0.0 0.0 0 1.055462187404089 0.0 0.0 0.2887254899964357 + T{M(Oxidation (M))|F}HQ 3.7789 + + 494 + 1 1.845 101586.7 1.0 3003 3401 6399 DOHH2_400M_050219_2,6406 DOHH2_400M_050219_2,6406,TFHQRGIAL True True TFHQRGIAL 34.270985 521.7933 1693908.5 6399.0 nc|ENSG00000106263|P55884-2|EIF3B;;ENST00000463026.5_1_7:2404000-2406084:+|nuORF;;ENSG00000106263|ENST00000360876|EIF3B 5.817324161529541 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6407 34.275 233.0 438650.0 25 0 72861.0 + 22210 LPQTRRISL 9 103 361.8926272571392 1082.6560523716178 3 361.8926269412041 MULTI CID FTMS 0 0 0 6399 222788.890625 1.0 0 0.0 8 Unmodified _LPQTRRISL_ ENSG00000198589|ENST00000651943|LRBA;ENST00000503716.5_1_4:151186876-151502511:-|nuORF;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA 14.40537977576856 0.4467465336100671 2 {I|L}{I|L}P 3 7 24.693 0.0 0.0 2.2808 0.0 0.0 0.0 756.4130295901913 756.4130295901913 13.433677739595034 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}P 2.2808 - 32 + 1 1.845 86583.6 1.0 3004 3401 6399 DOHH2_400M_050219_2,6407 DOHH2_400M_050219_2,6407,LPQTRRISL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6408 34.289 800.0 150180.0 25 0 9026.4 -1 0 127 925.428038417162 1848.841523901124 2 925.9289428591728 MULTI CID FTMS 0 0 0 6399 189744.359375 0.5421743749629432 -2 0.1975898742675781 9 2 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 80.483 0.0 0.0 4.3532 4.3532 76.633 0.0 0.0 0.0 11.129188525812282 56.58249605472472 11.129188525812282 6.020599913279625 0 0.8807196863200843 0.7695510786217261 0.3807196863200844 1.4802046884880935 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}A[RH]AEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}[HC][DV];[NP]{I|L}N{M(Oxidation (M))|F}A[RH]AEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}A[RH]AEN{I|L}[HC][DV];[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN[HC]{I|L}[DV];[NP]{I|L}N{M(Oxidation (M))|F}A[RH]AEN[HC]{I|L}[DV];[NP]{I|L}N{M(Oxidation (M))|F}[HV]TD{[CT]|[{M(Oxidation (M))|F}G]}{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]Q[YE]{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.3532;4.0275;3.6902;3.4749;3.3645;3.1493;3.1062;2.7806;2.6001;2.4953 -;-;-;-;-;-;-;-;-;- 2269 1 1.845 81845.9 0.800000011920929 3005 3401 6399 DOHH2_400M_050219_2,6408 DOHH2_400M_050219_2,6408, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6409 34.293 204.0 249770.0 25 0 20651.0 + + -1 YGMPRQIL 8 82 497.2633931195956 992.5122333059912 2 497.2634155154228 MULTI CID FTMS 0 0 0 6399 172474.359375 1.0 0 0.0 10 Carbamidomethyl (C) _LTC(Carbamidomethyl (C))LSRPF_ ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2;ENST00000478033.1_1_1:159888592-159888742:-|nuORF 14.581692164780916 0.6954967302934248 2 [YG]{M(Oxidation (M))|F} 3 -1 24.41 0.0 0.0 2.4594 0.0 0.0 0.0 622.3687451070256 622.3687451070256 10.9151498112135 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.0 0.0 [YG]{M(Oxidation (M))|F} 2.4594 - 87 1 1.845 45804.9 1.0 3006 3401 6399 DOHH2_400M_050219_2,6409 DOHH2_400M_050219_2,6409,LTCLSRPF False False YGMPRQIL 34.293095 497.263415515423 593323.3125 6399.0 ENSG00000158710|ENST00000368097|TAGLN2;;nc|ENSG00000158710|P37802-2|TAGLN2;;ENST00000478033.1_1_1:159888592-159888742:-|nuORF 2.4184533754984536 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6410 34.307 800.0 151920.0 25 0 9353.2 + 472 AEFYHPGQEY 10 139 620.7680276123066 1239.521502291413 2 620.7701904177666 MULTI CID FTMS 0 0 0 6399 161677.234375 0.374724977208336 1 -0.1156120300292968 11 Unmodified _AEFYHPGQEY_ CSNK2A1|p.K229Rfs*15|1|0.27|ENSG00000101266|chr20:489819-489819|C/-|frameshift_variant;ENSG00000101266|ENST00000217244|CSNK2A1;ENSG00000254598|ENST00000528848|CSNK2A3;nc|ENSG00000101266|P68400-2|CSNK2A1 45.739877483867886 0.1051543674217965 2 {[CP]|[EA]}QTYHEAEY 10 5 + 63.272 0.0 0.0 5.1046 5.1046 73.471 0.0 0.0 0.0 1.3724324227584503 13.02378753635658 1.3724324227584503 0.7077016673014569 0 1.305462187404089 0.0 1.4604093769761874 0.3252574989159953 {[CP]|[EA]}QTYHEAEY;{[CP]|[EA]}GATYHEAEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATYHEAEY;[AG]EATYHEAEY;[TA]G{[CP]|[EA]}YHEAEY;{[MS]|[{M(Oxidation (M))|F}A]}YEHYT{M(Oxidation (M))|F}Y;{[CP]|[EA]}[Y{M(Oxidation (M))|F}]HYT{M(Oxidation (M))|F}Y;[QT]{[CP]|[EA]}YHEAEY;{[QD]|[EN]|[WG]|[KD]|[RS]}[VS]YHEAEY;{[CP]|[EA]}QTYHEY{[CP]|[EA]} 5.1046;5.0475;4.9939;4.5347;4.1266;4.0539;3.9366;3.7875;3.4942;3.4921 -;-;-;-;-;-;-;-;-;- 2888 1 1.845 91666.0 0.8600000143051147 3007 3401 6399 DOHH2_400M_050219_2,6410 DOHH2_400M_050219_2,6410,AEFYHPGQEY True True AEFYHPGQEY 34.306932 620.770190417767 2461852.25 6399.0 nc|ENSG00000101266|P68400-2|CSNK2A1;;ENSG00000101266|ENST00000217244|CSNK2A1;;CSNK2A1|p.K229Rfs*15|1|0.27|ENSG00000101266|chr20:489819-489819|C/-|frameshift_variant;;ENSG00000254598|ENST00000528848|CSNK2A3 8.081489404042562 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6411 34.321 800.0 120850.0 25 0 6745.2 + + 14260 QEIYGGSDSRF 11 124 630.2802142095934 1258.5458754859867 2 630.7833129763603 MULTI CID FTMS 0 0 0 6399 151990.71875 1.0 0 0.0 12 Unmodified _IEEYFGELME_ ENSG00000115524|ENST00000335508|SF3B1;nc|ENSG00000115524|O75533-2|SF3B1 24.020572477871973 0.4289996903560794 2 EE{I|L}YGGSD{[QV]|[N{I|L}]|[RA]|[KV]}Y 11 -1 + 53.224 0.0 0.0 4.229 4.229 73.502 0.0 0.0 0.0 3.482135413933776 3.482135413933776 3.482135413933776 3.482135413933776 0 0.3494850021680094 1.6989700043360187 0.0 0.0 EE{I|L}YGGSD{[QV]|[N{I|L}]|[RA]|[KV]}Y;EE[HK]SGGY{I|L}[HC];EE{I|L}YNSD{[QV]|[N{I|L}]|[RA]|[KV]}Y;EE[YR]{M(Oxidation (M))|F}Y{I|L}[HC];EE[HK]SNY{I|L}[HC];EE{I|L}Y{M(Oxidation (M))|F}[HS][TA]Y;EE{I|L}YGG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TA]Y;EE{I|L}YG[WQ][TA]Y;EE{I|L}YGGSD[HV][PG];EE{I|L}YN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TA]Y 4.229;3.9523;3.9457;3.8578;3.669;3.4028;3.3574;3.3133;3.2645;3.0741 -;-;-;-;-;-;-;-;-;- 365 + 1 1.845 79469.1 0.8500000238418579 3008 3401 6399 DOHH2_400M_050219_2,6411 DOHH2_400M_050219_2,6411,IEEYFGELME False False QEIYGGSDSRF 34.320764 630.2823 0.0 6399.0 ENSG00000115524|ENST00000335508|SF3B1;;nc|ENSG00000115524|O75533-2|SF3B1 3.686424732208252 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6412 34.327 289.0 454210.0 25 0 53825.0 14951 ILMFLTWLP 9 154 378.5523354510385 1132.6351769533155 3 378.5532409548759 MULTI CID FTMS 0 0 0 6399 143347.09375 0.5567534855754205 -2 0.1975898742675781 13 Unmodified _ILMFLTWLP_ ENSG00000128791|ENST00000262120|TWSG1;nc|ENSG00000128791|Q9GZX9-2|TWSG1 16.149105407346934 0.3995459350917656 2 {I|L}{I|L}MEH{I|L}HK{I|L} 9 5 + 62.716 0.0 0.0 5.5372 5.5372 83.661 0.0 0.0 0.0 41.90978807609972 8.246914685257764 8.246914685257764 8.525020306706978 0 0.0 1.6989700043360187 0.7302046884880937 0.1694451763165201 {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}R{[QN]|[E{I|L}]|[KN]}V;{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQK{I|L};{I|L}{I|L}[YV]ER{[QN]|[E{I|L}]|[KN]}V;{I|L}{I|L}[YV]EQQK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[VP]{I|L}{[MG]|[TS]};{I|L}{I|L}[YV][{M(Oxidation (M))|F}T]HK{I|L};{I|L}{I|L}[YV]E[VP]{I|L}{[MG]|[TS]};{I|L}[YV]{I|L}ER{[QN]|[E{I|L}]|[KN]}V;{I|L}[YV]{I|L}EQQK{I|L} 5.5372;4.7845;4.4139;4.1876;3.817;3.3612;3.0196;2.7643;1.6255;1.2549 -;-;-;-;-;-;-;-;-;- 556 + 1 1.845 105684.3 1.0 3009 3401 6399 DOHH2_400M_050219_2,6412 DOHH2_400M_050219_2,6412,ILMFLTWLP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6413 34.331 191.0 335330.0 25 0 39809.0 + 10335 FSEPHARFY 9 91 385.1854249148544 1152.534445344763 3 385.1852294802666 MULTI CID FTMS 0 0 0 6399 112398.5625 0.8057366458834223 1 -0.1156120300292968 14 Unmodified _FSEPHARFY_ ENSG00000072062|ENST00000308677|PRKACA;ENSG00000142875|ENST00000370685|PRKACB;ENST00000536649.5_1_19:14208073-14223129:-|nuORF;nc|ENSG00000072062|P17612-2|PRKACA;nc|ENSG00000142875|P22694-10|PRKACB;nc|ENSG00000142875|P22694-3|PRKACB;nc|ENSG00000142875|P22694-4|PRKACB;nc|ENSG00000142875|P22694-5|PRKACB;nc|ENSG00000142875|P22694-6|PRKACB;nc|ENSG00000142875|P22694-7|PRKACB;nc|ENSG00000142875|P22694-8|PRKACB;nc|ENSG00000142875|P22694-9|PRKACB;nc|ENSG00000142875|P22694|PRKACB 4.5288652416199255 0.7565837746943351 2 {M(Oxidation (M))|F} 1 8 11.99 0.0 0.0 1.0403 0.0 0.0 987.4550824070662 0.0 987.4550824070662 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0403 + + 24 + 1 1.845 55903.4 1.0 3010 3401 6399 DOHH2_400M_050219_2,6413 DOHH2_400M_050219_2,6413,FSEPHARFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6414 34.345 800.0 83458.0 25 0 6845.4 6932 EEFVLFCDLPE 11 97 670.808918825435 0 670.8083984255791 PEAK CID FTMS 0 0 0 6399 118930.1640625 1.0 0 0.0 15 Unmodified _EEFVLFCDLPE_ ENSG00000115607|ENST00000687160|IL18RAP;nc|ENSG00000115607|O95256-3|IL18RAP;nc|ENSG00000115607|O95256-4|IL18RAP 17.11289562659939 0.3845757490720307 2 EEKS 4 9 33.22 0.0 0.0 2.4798 0.0 0.0 387.1437643092698 476.22675501041255 863.3705193196823 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.1549471895720984 0.0 EEKS 2.4798 - 59 + 1 1.845 53157.1 0.6700000166893005 3011 3401 6399 DOHH2_400M_050219_2,6414 DOHH2_400M_050219_2,6414,EEFVLFCDLPE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6415 34.346 61.0 734830.0 25 0 156340.0 -1 FAAATKSFV 9 64 492.2624934428678 0 492.2626220583916 PEAK CID FTMS 0 0 0 6399 651439.3125 0.966728242901412 1 -0.1156120300292968 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))FAAATKSFV_ ENSG00000204311|ENST00000644580|PJVK;ENST00000437056.5_1_2:179318136-179318400:+|nuORF 5.230669730166228 0.3444685223463734 2 Y 1 -1 6.9897 0.0 0.0 0.71141 0.0 0.0 750.3884837345654 66.0357912652953 816.4242749998607 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.71141 - 36 + 1 1.845 42748.5 1.0 3012 3401 6399 DOHH2_400M_050219_2,6415 DOHH2_400M_050219_2,6415,FAAATKSFV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6416 34.348 59.0 930110.0 25 0 107160.0 + 10431 FTDPRTMGY 9 86 544.2475078050454 1086.4804626768907 2 544.2473022341728 MULTI CID FTMS 0 0 0 6399 353208.875 0.6413672382066955 -2 0.1975898742675781 17 Unmodified _FTDPRTMGY_ ENSG00000140650|ENST00000268261|PMM2;ENST00000567697.1_1_16:8904837-8941679:+|nuORF 20.453626601364224 0.2830276176381075 2 Y 1 8 13.979 0.0 0.0 1.2867 0.0 0.0 905.4060283280612 0.0 905.4060283280612 0.0 1.105384569831001 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2867 + + 71 + 1 1.845 48661.2 1.0 3013 3401 6399 DOHH2_400M_050219_2,6416 DOHH2_400M_050219_2,6416,FTDPRTMGY False True FTDPRTMGY 34.347721 544.247302234173 5600052.0 6399.0 ENST00000567697.1_1_16:8904837-8941679:+|nuORF;;ENSG00000140650|ENST00000268261|PMM2 4.827111641565959 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6417 34.351 152.0 580530.0 25 0 30891.0 + 6022 DSDFRKDDFY 10 97 654.28075072994 1306.54694852668 2 654.2809936404228 MULTI CID FTMS 0 0 0 6399 263748.15625 0.5500580432604123 -1 0.1209640502929687 18 Unmodified _DSDFRKDDFY_ ENSG00000028203|ENST00000436874|VEZT;ENST00000547997.5_1_12:95650374-95694446:+|nuORF;ENST00000549192.5_1_12:95650374-95690042:+|nuORF;ENST00000552660.5_1_12:95650374-95694446:+|nuORF;nc|ENSG00000028203|Q9HBM0-2|VEZT 59.05245873256422 0.0390717477387156 2 {[DS]|[MA]|[CV]|TT}[R{M(Oxidation (M))|F}]RSDD{M(Oxidation (M))|F}Y 10 2 + 57.067 0.0 0.0 4.3678 4.3678 53.006 0.0 0.0 0.0 3.991110994145707 9.766128101111846 3.991110994145707 0.0 0 1.25 0.0 0.8703715150305281 0.0 {[DS]|[MA]|[CV]|TT}[R{M(Oxidation (M))|F}]RSDD{M(Oxidation (M))|F}Y;{[DS]|[MA]|[CV]|TT}[R{M(Oxidation (M))|F}]RDSD{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[DV]RSDD{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[DV]RDSD{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[RV]DDSD{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[RV]DSDD{M(Oxidation (M))|F}Y;[YQ][DV]RDSD{M(Oxidation (M))|F}Y;[YQ][DV]RSDD{M(Oxidation (M))|F}Y;[YE]{[NV]|[RG]}RDSD{M(Oxidation (M))|F}Y;[YE]{[NV]|[RG]}RSDD{M(Oxidation (M))|F}Y 4.3678;4.3678;4.0623;4.0623;3.8319;3.8319;3.7894;3.7894;3.7153;3.7153 -;-;-;-;-;-;-;-;-;- 1410 1 1.845 67505.5 1.0 3014 3401 6399 DOHH2_400M_050219_2,6417 DOHH2_400M_050219_2,6417,DSDFRKDDFY True True DSDFRKDDFY 34.350761 654.280993640423 2928987.25 6399.0 ENST00000552660.5_1_12:95650374-95694446:+|nuORF;;ENST00000547997.5_1_12:95650374-95694446:+|nuORF;;ENST00000549192.5_1_12:95650374-95690042:+|nuORF;;ENSG00000028203|ENST00000436874|VEZT;;nc|ENSG00000028203|Q9HBM0-2|VEZT 6.032526969909668 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6418 34.366 800.0 210750.0 25 0 25314.0 + 34708 SPVVRVAV 8 169 413.7608108374503 825.5070687417006 2 413.7609130740166 MULTI CID FTMS 0 0 0 6399 129154.8203125 1.0 0 0.0 19 Unmodified _SPVVRVAV_ ENSG00000167658|ENST00000309311|EEF2 48.345845343767074 0.1470278396477103 2 SPVV 4 4 55.79 0.0 0.0 6.7582 0.0 0.0 0.0 440.2639554668073 440.2639554668073 44.19592522764098 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + SPVV 6.7582 + + 156 + 1 1.845 132192.4 0.5799999833106995 3015 3401 6399 DOHH2_400M_050219_2,6418 DOHH2_400M_050219_2,6418,SPVVRVAV False True SPVVRVAV 34.365749 413.760913074017 1099475.625 6399.0 ENSG00000167658|ENST00000309311|EEF2 4.6243330637613935 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6420 34.371 34.0 1069200.0 25 0 58745.0 + 2532 ASDPYQVHV 9 77 508.2457842043588 1014.4770154755176 2 508.2459899783134 MULTI CID FTMS 0 0 0 6419 846154.25 0.2702984136678981 2 -0.2763481140136719 1 Unmodified _ASDPYQVHV_ ENSG00000047315|ENST00000314595|POLR2B 32.30548876998284 0.1201446275138228 2 {[SA]|[TG]}DPYQVHV 9 0 + 49.72 0.0 0.0 4.901 4.901 83.157 0.0 0.0 0.0 31.126342309407544 8.908555305749317 8.908555305749317 9.208187539523747 0 0.2887254899964357 1.5228787452803376 0.0 0.0 + + {[SA]|[TG]}DPYQVHV;{[SA]|[TG]}DPY[AG]VHV;{[SA]|[TG]}{[ET]|[MV]}VHV{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[SG]VHWW 4.901;3.9934;2.3315;1.2617 +;-;-;- + 153 + 1 1.847 31902.9 1.0 3016 3402 6419 DOHH2_400M_050219_2,6420 DOHH2_400M_050219_2,6420,ASDPYQVHV True True ASDPYQVHV 34.37053 508.245989978313 42293716.0 6419.0 ENSG00000047315|ENST00000314595|POLR2B 9.818421681722006 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6421 34.375 218.0 259460.0 25 0 11525.0 + 29006 QEAGIKTAF 9 106 482.7586530245729 963.5027531159458 2 482.7587463259697 MULTI CID FTMS 0 0 0 6419 192200.75 0.0987321609705508 2 -0.2763481140136719 2 Unmodified _QEAGIKTAF_ ENSG00000128050|ENST00000512576|PAICS 29.081581746732265 0.1611639662936252 2 [TA]G[K{I|L}]AWA{M(Oxidation (M))|F} 9 4 [TA]G[K{I|L}]AW + + 15.573 7.7643 1.0674 1.6163 1.6163 47.186 0.0 0.0 0.0 0.0 3.337359645711329 0.0 0.0 0 0.0 0.0 0.0 0.0 [TA]G[K{I|L}]AWA{M(Oxidation (M))|F} 1.6163 - 354 + 1 1.847 47626.5 1.0 3017 3402 6419 DOHH2_400M_050219_2,6421 DOHH2_400M_050219_2,6421,QEAGIKTAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6422 34.376 72.0 746530.0 25 0 68553.0 + 2710 ATETQPIVY 9 90 511.2633611973749 1020.5121694615498 2 511.2638122439384 MULTI CID FTMS 0 0 0 6419 828711.4375 0.8263610600549387 -1 0.1156120300292968 3 Unmodified _ATETQPIVY_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 58.6788170122104 0.0268135626297836 2 [TA]ETQP{I|L}VY 9 0 + 59.094 0.0 0.0 5.7907 5.7907 86.649 0.0 0.0 0.0 18.516055957898416 34.18043940811977 18.516055957898416 9.208187539523747 0 1.242992819099939 1.0457574905606752 1.5114393726401687 0.0 + + [TA]ETQP{I|L}VY;[TA]ET[AG]P{I|L}VY;[TA]EG[TA]P{I|L}VY;[TA]GE[TA]P{I|L}VY;[QT]E[TA]P{I|L}VY;{[DA]|[EG]}[TA][TA]P{I|L}VY;{[SA]|[TG]}AE[TA]P{I|L}VY;{[DA]|[EG]}PG{[WT]|[RM]}{I|L}VY;{[SA]|[TG]}WWP{I|L}VY;[WK]{[HG]|PP}[MT]VY 5.7907;4.8883;4.2009;3.7502;2.8911;2.753;2.6751;2.5054;2.434;2.3433 +;-;-;-;-;-;-;-;-;- + 390 1 1.847 47366.4 1.0 3018 3402 6419 DOHH2_400M_050219_2,6422 DOHH2_400M_050219_2,6422,ATETQPIVY True True ATETQPIVY 34.376332 511.263812243938 6716910.5 6419.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 5.999187628428142 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6423 34.378 65.0 1063900.0 25 0 111070.0 + 5384 DLKQKVENL 9 101 543.8112067259167 1085.6078605186333 2 543.8115112185478 MULTI CID FTMS 0 0 0 6419 674072.4375 1.0 0 0.0 4 Unmodified _DLKQKVENL_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 43.9818466556824 0.0535980856389242 2 D{I|L}KQ 4 5 63.532 0.0 0.0 5.8522 0.0 0.0 0.0 598.3218477838499 598.3218477838499 38.12128680065428 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.805462187404089 + D{I|L}KQ 5.8522 + + 183 + 1 1.847 59328.9 1.0 3019 3402 6419 DOHH2_400M_050219_2,6423 DOHH2_400M_050219_2,6423,DLKQKVENL True True DLKQKVENL 34.377909 543.811511218548 3430095.75 6419.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 5.458264191945394 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6424 34.38 110.0 689440.0 25 0 40573.0 + 35368 STDPSVLGKY 10 84 533.7735832088263 1065.5326134844524 2 533.7744628787041 MULTI CID FTMS 0 0 0 6419 551295.5625 0.5943172203129731 -1 0.1156120300292968 5 Unmodified _STDPSVLGKY_ ENSG00000114315|ENST00000232424|HES1 55.50274090549119 0.048383292844968 2 {[MG]|[TS]}DPSV{I|L}GKY 10 0 + 53.933 0.0 0.0 5.0616 5.0616 86.449 0.0 0.0 0.0 39.95313236702216 11.06446953481715 11.06446953481715 14.515671502472742 0 0.6989700043360187 0.0 0.4247425010840047 0.0 + + {[MG]|[TS]}DPSV{I|L}GKY;{[MG]|[TS]}DPSV[VP]PAP;{[MG]|[TS]}DPS[R{I|L}]KY 5.0616;3.6993;2.9713 +;-;- + 154 + 1 1.847 63579.5 1.0 3020 3402 6419 DOHH2_400M_050219_2,6424 DOHH2_400M_050219_2,6424,STDPSVLGKY True True STDPSVLGKY 34.38023 533.774462878704 10954563.0 6419.0 ENSG00000114315|ENST00000232424|HES1 7.94477113087972 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6425 34.382 82.0 694800.0 25 0 57016.0 + 44916 YPPPHQVF 8 76 492.7500487937923 983.4855446543846 2 492.7497436404228 MULTI CID FTMS 0 0 0 6419 473932.15625 0.8331255348549353 -1 0.1156120300292968 6 Unmodified _YPPPHQVF_ ENSG00000076248|ENST00000242576|UNG;ENST00000540158.1_1_12:109535484-109537104:+|nuORF;nc|ENSG00000076248|P13051-2|UNG 26.34127834903884 0.4900704351052977 2 YP[MT]{[QV]|[N{I|L}]|[RA]|[KV]}V{M(Oxidation (M))|F} 8 3 + 45.217 0.0 0.0 4.5976 4.5976 78.779 0.0 0.0 0.0 24.020155119932475 0.0002922940618006 0.0002922940618006 6.866654986684736 0 0.7134679910804405 2.0 0.0 0.0 YP[MT]{[QV]|[N{I|L}]|[RA]|[KV]}V{M(Oxidation (M))|F};YP{[HG]|PP}[HQ]V{M(Oxidation (M))|F};YP{[HG]|PP}P[TA]{[QN]|[E{I|L}]|[KN]};YP{[HG]|PP}T[PA]{[QN]|[E{I|L}]|[KN]};YP[H{I|L}]{[NV]|[RG]}{[QN]|[E{I|L}]|[KN]};Y[YK][HQ]V{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PT[YK]{[QN]|[E{I|L}]|[KN]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PTP{[HG]|PP}{[QN]|[E{I|L}]|[KN]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPT{[HG]|PP}{[QN]|[E{I|L}]|[KN]};[HK]YT{[HG]|PP}{[QN]|[E{I|L}]|[KN]} 4.5976;3.8994;3.369;3.19;2.7103;0.78221;0.722;0.66999;0.49094;0.37634 -;+;-;-;-;-;-;-;-;- + 271 + 1 1.847 52259.7 1.0 3021 3402 6419 DOHH2_400M_050219_2,6425 DOHH2_400M_050219_2,6425,YPPPHQVF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6426 34.384 112.0 754000.0 25 0 94719.0 36963 TFEEFSQRFG 10 98 416.5278117557482 1246.5616058674443 3 416.5276367068291 MULTI CID FTMS 0 0 0 6419 416793.4375 0.3639652467970794 -1 0.1156120300292968 7 Unmodified _TFEEFSQRFG_ ENSG00000169994|ENST00000409816|MYO7B;nc|ENSG00000169994|Q6PIF6-2|MYO7B;nc|ENSG00000169994|Q6PIF6|MYO7B 8.444304893310646 0.6875766406947869 2 HEG{M(Oxidation (M))|F}H{[{M(Oxidation (M))|F}C]|[YS]} 7 7 26.33 0.0 0.0 2.1122 0.0 0.0 371.21699721504064 0.0 371.21699721504064 0.0 11.726307269461742 0.0 0.0 0 0.0 0.0 0.0 0.0 HEG{M(Oxidation (M))|F}H{[{M(Oxidation (M))|F}C]|[YS]} 2.1122 - 365 1 1.847 75102.6 1.0 3022 3402 6419 DOHH2_400M_050219_2,6426 DOHH2_400M_050219_2,6426,TFEEFSQRFG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6427 34.388 193.0 411090.0 25 0 36170.0 + 32837 SEGPITHQW 9 116 527.7510137254574 1053.4874745177146 2 527.7516357302666 MULTI CID FTMS 0 0 0 6419 376838.375 1.0 0 0.0 8 Unmodified _SEGPITHQW_ ENSG00000005844|ENST00000356798|ITGAL;nc|ENSG00000005844|P20701-2|ITGAL;nc|ENSG00000005844|P20701-3|ITGAL 69.10491478415734 0.0214449631113747 2 {[ES]|[DT]|[{I|L}C]}GP{I|L}THQW 9 0 + 69.434 0.0 0.0 6.5908 6.5908 93.372 0.0 0.0 0.0 30.29422711158276 11.706962271689749 11.706962271689749 22.50508444608478 0 0.805462187404089 0.0 0.0 1.329689690656103 + + {[ES]|[DT]|[{I|L}C]}GP{I|L}THQW;{[ES]|[DT]|[{I|L}C]}GP{I|L}TH[AG]W;{[ES]|[DT]|[{I|L}C]}GP{I|L}T[C(Carbamidomethyl (C))K]Y;{[CT]|[{M(Oxidation (M))|F}G]}QHT{I|L}H{[QS]|[NT]};[PG][WE]T{I|L}H{[QS]|[NT]};{[CT]|[{M(Oxidation (M))|F}G]}[AG]HT{I|L}H{[QS]|[NT]};{[ES]|[DT]|[{I|L}C]}GP{[CA]|SS}K{[TV]|[{I|L}S]}Y;[WQ]QQ{I|L}H{[QS]|[NT]};[PG]{I|L}T[WE]H{[QS]|[NT]};[WE][PG]T{I|L}H{[QS]|[NT]} 6.5908;4.4546;4.4358;3.921;2.9028;2.1462;1.7117;1.6971;1.5521;1.4573 +;-;-;-;-;-;-;-;-;- + 655 + 1 1.847 64238.4 1.0 3023 3402 6419 DOHH2_400M_050219_2,6427 DOHH2_400M_050219_2,6427,SEGPITHQW True True SEGPITHQW 34.38814 527.7515 2039550.0 6419.0 ENSG00000005844|ENST00000356798|ITGAL;;nc|ENSG00000005844|P20701-2|ITGAL;;nc|ENSG00000005844|P20701-3|ITGAL 8.529522895812988 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6428 34.392 202.0 480740.0 25 0 46295.0 + 6931 EEFTHKDGVW 10 103 624.2884073732176 1246.5622618132352 2 624.2878295779228 MULTI CID FTMS 0 0 0 6419 352680.375 0.4291634429323156 -1 0.1156120300292968 9 Unmodified _EEFTHKDGVW_ ENSG00000174231|ENST00000304992|PRPF8 84.73772076367982 0.0131850676153821 2 EE{M(Oxidation (M))|F}THK[DG]VW 10 0 + 64.148 0.0 0.0 5.146 5.146 80.099 0.0 0.0 0.0 9.692186200106612 6.162890859133213 6.162890859133213 6.162890859133213 0 2.492992819099939 1.3979400086720375 2.4604093769761874 0.0 + + EE{M(Oxidation (M))|F}THK[DG]VW;EE{M(Oxidation (M))|F}GYKDGV{[CT]|[{M(Oxidation (M))|F}G]};EE{M(Oxidation (M))|F}VVHT[NS]W;EE{M(Oxidation (M))|F}THK[RD]W;EE{M(Oxidation (M))|F}GYKDK[MT];EE{M(Oxidation (M))|F}THV[NS]VW;EE{M(Oxidation (M))|F}TH[QP]GV{[CT]|[{M(Oxidation (M))|F}G]};EE{M(Oxidation (M))|F}GYKDR{[CT]|[{M(Oxidation (M))|F}G]};EE{M(Oxidation (M))|F}TH[QP]K[MT];EE{M(Oxidation (M))|F}TH{[WN]|[YH]}V[VS] 5.146;4.6516;4.5429;4.443;4.3949;4.3685;4.3606;4.1241;4.1039;4.0609 +;-;-;-;-;-;-;-;-;- + 1701 1 1.847 77615.4 1.0 3024 3402 6419 DOHH2_400M_050219_2,6428 DOHH2_400M_050219_2,6428,EEFTHKDGVW True True EEFTHKDGVW 34.392017 624.287829577923 11808009.0 6419.0 ENSG00000174231|ENST00000304992|PRPF8 8.264528751373291 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6429 34.395 133.0 355280.0 25 0 19313.0 + 7795 ELHQLQQHL 9 94 382.5410864782799 1144.6014300350396 3 382.5411559939384 MULTI CID FTMS 0 0 0 6419 243775.421875 1.0 0 0.0 10 Unmodified _ELHQLQQHL_ REV__ENSG00000177047|ENST00000380229|IFNW1 7.289230182591677 0.6602208344931196 2 A{I|L}EE 4 -1 14.693 0.0 0.0 1.2837 0.0 0.0 684.4176502912125 0.0 684.4176502912125 0.0 1.928527761275128 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}EE 1.2837 - 44 1 1.847 42535.8 1.0 3025 3402 6419 DOHH2_400M_050219_2,6429 DOHH2_400M_050219_2,6429,ELHQLQQHL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6430 34.409 800.0 374600.0 25 0 46378.0 + 358 AECYMNHRFY 10 153 667.2761768702405 1332.537800807281 2 667.2753784060478 MULTI CID FTMS 0 0 0 6419 218763.921875 0.365644509810558 -1 0.1156120300292968 11 Unmodified _AECYMNHRFY_ REV__ENSG00000148985|ENST00000278243|PGAP2;REV__ENST00000490830.5_1_11:3845682-3846685:+|nuORF;REV__nc|ENSG00000148985|Q9UHJ9-3|PGAP2;REV__nc|ENSG00000148985|Q9UHJ9-5|PGAP2;REV__nc|ENSG00000148985|Q9UHJ9|PGAP2 19.256988751693697 0.5244284437930726 2 {[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F}Y 11 -1 + 102.52 0.0 0.0 7.6936 7.6936 81.828 0.0 0.0 0.0 0.632974357754307 43.47287706384487 0.632974357754307 1.1313826580723116 0 1.2887254899964358 0.6575773191777937 1.948104871308642 2.159379381312206 {[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQ{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGA{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F}Y;[AG]NA{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}QA{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQ{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;[AG]NAQ{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGA{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y;[AG]NAGA{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F}Y 7.6936;7.6087;7.5856;7.5301;7.5107;7.4082;7.2285;7.2092;7.2077;7.1884 -;-;-;-;-;-;-;-;-;- 20700 1 1.847 214204.8 0.8899999856948853 3026 3402 6419 DOHH2_400M_050219_2,6430 DOHH2_400M_050219_2,6430,AECYMNHRFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6431 34.422 800.0 215950.0 25 0 33150.0 13064 HCFQPDVSGFS 11 175 612.2623527778503 1222.5101526225003 2 612.2618286013603 MULTI CID FTMS 0 0 0 6419 179611.578125 0.0753431449813206 3 -0.3916053771972656 12 Unmodified _HCFQPDVSGFS_ nc|ENSG00000146151|Q8TB92|HMGCLL1 20.41453444215458 0.6105011870913812 2 Y{I|L}D{M(Oxidation (M))|F}S{I|L}PAS 9 9 67.344 0.0 0.0 5.5086 0.0 0.0 0.0 226.04725061588127 226.04725061588127 35.959979035652 0.0 0.0 0.0 0 0.7887254899964358 1.5228787452803376 1.3996498648046138 0.0 Y{I|L}D{M(Oxidation (M))|F}S{I|L}PAS 5.5086 - 5327 + 1 1.847 129682.8 0.800000011920929 3027 3402 6419 DOHH2_400M_050219_2,6431 DOHH2_400M_050219_2,6431,HCFQPDVSGFS False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6432 34.431 491.0 205670.0 25 0 14595.0 + 29037 QEFGVPHQY 9 123 552.759531956976 1103.504510980752 2 552.7615844607353 MULTI CID FTMS 0 0 0 6419 170046.25 0.2862187292462386 1 -0.1234283447265625 13 Unmodified _QEFGVPHQY_ ENSG00000198408|ENST00000361464|OGA;nc|ENSG00000198408|O60502-3|OGA 65.23502041540118 0.0231836506122253 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RPHQY 8 2 + 38.339 0.0 0.0 3.4743 3.4743 68.246 0.0 0.0 0.0 20.596850371728763 12.380521827513531 12.380521827513531 1.3033376849500584 0 0.6747425010840047 0.0 0.0 0.4247425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RPHQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}GVPHQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RPH[AG]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}GVPH[AG]Y;[QA][DN][KT]HQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[NG][KT]HQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RV[HC]W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}GVV[HC]W;[AG]EW[VP][WP]Y;[QA]Q{[QN]|[E{I|L}]|[KN]}[QP]QY 3.4743;3.3562;2.2501;2.1368;1.8004;1.7542;1.1457;1.0276;0.87389;0.82245 -;+;-;-;-;-;-;-;-;- + 1171 + 1 1.847 79063.3 1.0 3028 3402 6419 DOHH2_400M_050219_2,6432 DOHH2_400M_050219_2,6432,QEFGVPHQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6433 34.445 800.0 145980.0 25 0 6733.4 -1 GLYHFCLY 8 161 536.7497607615971 1071.4849685899942 2 536.7504760622978 MULTI CID FTMS 0 0 0 6419 138784.65625 0.1821218773487445 2 -0.2763481140136719 14 Carbamidomethyl (C) _GLYHFC(Carbamidomethyl (C))LY_ ENSG00000205336|ENST00000562631|ADGRG1;ENST00000564907.5_1_16:57684180-57697491:+|nuORF;ENST00000564912.5_1_16:57684199-57687923:+|nuORF;ENST00000565539.5_1_16:57684180-57697491:+|nuORF;nc|ENSG00000205336|Q9Y653-3|ADGRG1;nc|ENSG00000205336|Q9Y653|ADGRG1 24.20995872069341 0.5349487244130675 2 {[VA]|[{I|L}G]}DP 4 -1 40.119 0.0 0.0 3.7443 0.0 0.0 0.0 686.2805880182249 686.2805880182249 21.09157631400734 0.0 0.0 0.0 0 0.6307196863200843 2.0 0.0 0.0 {[VA]|[{I|L}G]}DP 3.7443 - 347 + 1 1.847 96487.7 0.6800000071525574 3029 3402 6419 DOHH2_400M_050219_2,6433 DOHH2_400M_050219_2,6433,GLYHFCLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6434 34.46 800.0 183510.0 25 0 8086.0 -1 0 84 910.9155704039888 1819.8165878747773 2 911.4188110232352 MULTI CID FTMS 0 0 0 6419 90725.625 0.2443874278383579 -4 0.4525146484375 15 2 QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 58.866 0.0 0.0 3.2347 0.0 0.0 734.3703946431385 0.0 734.3703946431385 0.0 32.51734675796754 0.0 0.0 0 1.3807196863200843 0.0 0.0 1.174742501084005 QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.2347 - 266 1 1.847 99866.2 0.5400000214576721 3030 3402 6419 DOHH2_400M_050219_2,6434 DOHH2_400M_050219_2,6434, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6435 34.474 800.0 282720.0 25 0 26283.0 + -1 QNQYELFMEVM 11 147 732.3127535720795 1462.6109542109589 2 732.8107787966728 MULTI CID FTMS 0 0 0 6419 86472.609375 0.0518664004397744 -4 0.4525146484375 16 2 Oxidation (M) _QNQYELFM(Oxidation (M))EVM(Oxidation (M))_ REV__ENSG00000152253|ENST00000282074|SPC25;REV__ENST00000479309.6_1_2:169690730-169745796:-|nuORF 13.042465956692816 0.7638483625850725 2 [AG]NHDEAQAGNA{M(Oxidation (M))|F} 13 -1 119.27 0.0 0.0 8.1545 0.0 0.0 0.0 177.05660785769638 177.05660785769638 73.89476359958316 0.0 0.0 0.0 0 0.5866968715561641 1.5228787452803376 0.9269359821608808 2.4916440611282624 [AG]NHDEAQAGNA{M(Oxidation (M))|F} 8.1545 - 93813 1 1.847 160727.9 0.5899999737739563 3031 3402 6419 DOHH2_400M_050219_2,6435 DOHH2_400M_050219_2,6435,QNQYELFMEVM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6436 34.489 800.0 188000.0 25 0 31096.0 + -1 TVLPMLLPV 9 146 499.8033633735408 0 499.8032714724541 PEAK CID FTMS 0 0 0 6419 83983.5 0.9274113204369766 1 -0.1234283447265625 17 Oxidation (M) _TVLPM(Oxidation (M))LLPV_ REV__ENSG00000137936|ENST00000260502|BCAR3;REV__nc|ENSG00000137936|O75815-2|BCAR3;REV__nc|ENSG00000137936|O75815-3|BCAR3 19.438996006549623 0.2061572778002301 2 D 1 -1 13.737 0.0 0.0 1.377 0.0 0.0 797.475732018763 82.06691156558827 879.5426435843513 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.25 0.0 D 1.377 - 113 + 1 1.847 118742.5 0.4799999892711639 3032 3402 6419 DOHH2_400M_050219_2,6436 DOHH2_400M_050219_2,6436,TVLPMLLPV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6438 34.494 21.0 1737000.0 25 0 198730.0 38633 TTIKAFFPKK 10 66 394.2411698916841 1179.7016802752523 3 394.2412292361259 MULTI CID FTMS 0 0 0 6437 1481320.875 0.1248001292551543 2 -0.2681770324707031 1 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 26.268140514670165 0.3785003716575977 2 TT{I|L}KY{I|L}WKK 9 4 + 85.856 0.0 0.0 7.2778 7.2778 96.977 0.0 0.0 0.0 80.37192209717617 16.8348435778082 16.8348435778082 85.85647216221645 0 0.3807196863200844 1.5228787452803376 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK 7.2778 - 66 + 1 1.847 35346.6 1.0 3033 3403 6437 DOHH2_400M_050219_2,6438 DOHH2_400M_050219_2,6438,TTIKAFFPKK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6439 34.495 24.0 1417800.0 25 0 148420.0 + 7070 EELLGDGHSY 10 65 560.2511627305616 1118.4877725279232 2 560.2516357302666 MULTI CID FTMS 0 0 0 6437 1232313.0 0.0692438347340223 2 -0.2681770324707031 2 Unmodified _EELLGDGHSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000495288.5_1_1:151372054-151373071:+|nuORF 49.93300154707207 0.0805441195901191 2 EE{I|L}{I|L}[DG]G 7 3 42.949 0.0 0.0 3.8399 0.0 0.0 0.0 402.1444185846313 402.1444185846313 26.750831893227268 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.8494850021680094 0.0 + EE{I|L}{I|L}[DG]G 3.8399 + + 136 + 1 1.847 32429.2 1.0 3034 3403 6437 DOHH2_400M_050219_2,6439 DOHH2_400M_050219_2,6439,EELLGDGHSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6440 34.496 22.0 2950500.0 25 0 391330.0 + 722 AEPLPRNGDQW 11 58 641.8122875110138 1281.6100220888277 2 641.8126098513603 MULTI CID FTMS 0 0 0 6437 2479351.0 0.8697376852765293 1 -0.1529197692871093 3 Unmodified _AEPLPRNGDQW_ ENSG00000166483|ENST00000450114|WEE1;nc|ENSG00000166483|P30291-2|WEE1 39.21299971606389 0.2245192836502623 2 {[CP]|[EA]}P{I|L}{[CT]|[{M(Oxidation (M))|F}G]}Q 7 5 31.298 0.0 0.0 2.4421 0.0 0.0 0.0 536.2216711880379 536.2216711880379 2.829241303624741 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.3807196863200844 {[CP]|[EA]}P{I|L}{[CT]|[{M(Oxidation (M))|F}G]}Q 2.4421 - 75 + 1 1.847 54183.3 1.0 3035 3403 6437 DOHH2_400M_050219_2,6440 DOHH2_400M_050219_2,6440,AEPLPRNGDQW False True AEPLPRNGDQW 34.496191 641.81260985136 85277046.0 6437.0 nc|ENSG00000166483|P30291-2|WEE1;;ENSG00000166483|ENST00000450114|WEE1 8.388583819071451 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6441 34.498 87.0 588380.0 25 0 50212.0 + 20846 LMDSLLVPQ 9 72 508.2776279697644 1014.5407030063288 2 508.7800475955009 MULTI CID FTMS 0 0 0 6437 539460.875 0.7229184707088323 3 -0.381195068359375 4 Unmodified _LMDSLLVPQ_ REV__nc|ENSG00000146373|Q8TC41-2|RNF217 12.531546534597751 0.4974689918368763 2 QTPQ 4 -1 33.047 0.0 0.0 3.2574 0.0 0.0 542.3192005841812 0.0 542.3192005841812 0.0 20.283234164954003 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 QTPQ 3.2574 - 80 1 1.847 50841.6 1.0 3036 3403 6437 DOHH2_400M_050219_2,6441 DOHH2_400M_050219_2,6441,LMDSLLVPQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6442 34.503 241.0 286040.0 25 0 56119.0 + 37358 TILTKSTL 8 106 438.7732951187276 875.5320373042553 2 438.7733032107353 MULTI CID FTMS 0 0 0 6437 277672.28125 0.9618240153103584 1 -0.1529197692871093 5 Unmodified _TKLSTLTL_ ENSG00000121152|ENST00000240423|NCAPH;chr2:96335848-96341675|38|14.97|0.71|4.39|+|ENST00000435975|NCAPH,NCAPH;nc|ENSG00000121152|Q15003-2|NCAPH 32.78568957990786 0.3549862272178655 2 [{I|L}T]KST{I|L}T{I|L} 8 2 + 52.47 0.0 0.0 5.9929 5.9929 91.626 0.0 0.0 0.0 6.227371622191605 24.25956229218017 6.227371622191605 24.731975075880328 0 1.057902146726378 2.0 0.6307196863200843 0.0 [{I|L}T]KST{I|L}T{I|L};[KT]{I|L}ST{I|L}T{I|L};[KT]S{I|L}T{I|L}T{I|L};{[TV]|[{I|L}S]}[KT]T{I|L}T{I|L} 5.9929;3.1681;2.138;0.65342 -;+;-;- + 255 1 1.847 59804.9 1.0 3037 3403 6437 DOHH2_400M_050219_2,6442 DOHH2_400M_050219_2,6442,TKLSTLTL False False TILTKSTL 34.502618 438.773303210735 1750561.875 6437.0 ENSG00000121152|ENST00000240423|NCAPH;;chr2:96335848-96341675|38|14.97|0.71|4.39|+|ENST00000435975|NCAPH,NCAPH;;nc|ENSG00000121152|Q15003-2|NCAPH 0.414671058456103 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6443 34.509 377.0 151310.0 25 0 11287.0 -1 CHCIFHWCCYV 11 70 821.3136074702786 1640.6126620073571 2 821.3140746951103 MULTI CID FTMS 0 0 0 6437 226014.359375 0.6759813982336434 2 -0.2681770324707031 6 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))HC(Carbamidomethyl (C))IFHWC(Carbamidomethyl (C))C(Carbamidomethyl (C))YV_ ENSG00000108379|ENST00000225512|WNT3 0.3506318815782774 0.8734936314171269 2 [YE]DD[HM]Y{M(Oxidation (M))|F}YE{[ET]|[MV]} 12 -1 [YE]DD[HM]Y{M(Oxidation (M))|F} + + 24.085 10.903 0.99082 1.4681 1.4681 47.073 0.0 0.0 0.0 0.0 9.392653074926043 0.0 0.0 0 0.5 0.0 1.305462187404089 0.0 [YE]DD[HM]Y{M(Oxidation (M))|F}YE{[ET]|[MV]} 1.4681 - 185 + 1 1.847 48013.0 1.0 3038 3403 6437 DOHH2_400M_050219_2,6443 DOHH2_400M_050219_2,6443,CHCIFHWCCYV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6444 34.514 232.0 341490.0 25 0 24935.0 + 44266 YLKVRPDEI 9 84 566.8223508851107 1131.6301488370214 2 566.8221923708916 MULTI CID FTMS 0 0 0 6437 223007.421875 1.0 0 0.0 7 Unmodified _YLKVRPDEI_ nc|ENSG00000108312|P17480-2|UBTF 41.95555342248728 0.0647214845423414 2 Y{I|L}KVR 5 4 74.949 0.0 0.0 6.6231 0.0 0.0 0.0 469.1948946588501 469.1948946588501 53.878493940035455 0.0 0.0 0.0 0 1.274227503252014 2.0 0.0 0.4247425010840047 + Y{I|L}KVR 6.6231 + + 91 + 1 1.847 64854.1 1.0 3039 3403 6437 DOHH2_400M_050219_2,6444 DOHH2_400M_050219_2,6444,YLKVRPDEI True True YLKVRPDEI 34.513789 566.822192370892 640591.625 6437.0 nc|ENSG00000108312|P17480-2|UBTF 5.098855177561442 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6445 34.518 209.0 400630.0 25 0 32555.0 + + -1 REIDYKTAF 9 105 571.2912459961228 1140.5679390590456 2 571.7955200076103 MULTI CID FTMS 0 0 0 6437 208638.96875 1.0 0 0.0 8 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))LRSHGTGC(Carbamidomethyl (C))VL_ ENSG00000164941|ENST00000523731|INTS8;ENST00000523998.1_1_8:95888301-95888382:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8 4.897010918128616 0.7039849508293987 2 ATKYD 5 -1 31.498 0.0 0.0 2.7616 0.0 0.0 164.06837552485598 395.2039888971313 559.2723644219873 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 ATKYD 2.7616 - 241 + 1 1.847 67844.2 1.0 3040 3403 6437 DOHH2_400M_050219_2,6445 DOHH2_400M_050219_2,6445,LRSHGTGCVL False False REIDYKTAF 34.51776 571.79552000761 641239.3125 6437.0 ENSG00000164941|ENST00000523731|INTS8;;ENST00000523998.1_1_8:95888301-95888382:+|nuORF;;nc|ENSG00000164941|Q75QN2-2|INTS8 6.9098280270894366 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6446 34.525 398.0 269250.0 25 0 42940.0 + 25140 MQKEITAL 8 122 467.25722510666577 932.4998972801316 2 467.2569457888603 MULTI CID FTMS 0 0 0 6437 206620.359375 1.0 0 0.0 9 Unmodified _MQKEITAL_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 19.256988751693697 0.6264283240490721 2 [TA]{[NV]|[RG]}M{I|L}TA{I|L} 9 5 [TA]{[NV]|[RG]}M{I|L} + + 22.479 1.7574 0.27926 2.4107 2.4107 47.95 0.0 0.0 0.0 0.0 11.545099416150077 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 [TA]{[NV]|[RG]}M{I|L}TA{I|L} 2.4107 - 280 + 1 1.847 86843.6 1.0 3041 3403 6437 DOHH2_400M_050219_2,6446 DOHH2_400M_050219_2,6446,MQKEITAL False True MQKEITAL 34.524873 467.25694578886 1385999.25 6437.0 ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000163017|ENST00000345517|ACTG2;;ENSG00000107796|ENST00000224784|ACTA2;;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;ENSG00000159251|ENST00000290378|ACTC1;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENSG00000075624|ENST00000646664|ACTB 2.53239780664444 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6447 34.531 320.0 232850.0 25 0 28333.0 + 633 AELDRQIKSF 10 101 402.8873443871574 1205.6402037616722 3 402.8873474001884 MULTI CID FTMS 0 0 0 6437 177870.53125 0.0538938080480816 2 -0.2681770324707031 10 Unmodified _AELDRQIKSF_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 22.774965066869 0.4569865297271528 2 AE[HD]K{I|L}Q 7 6 54.327 0.0 0.0 4.5061 0.0 0.0 0.0 381.1872652643188 381.1872652643188 37.35940408613522 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.3494850021680094 AE[HD]K{I|L}Q 4.5061 - 230 + 1 1.847 61937.7 1.0 3042 3403 6437 DOHH2_400M_050219_2,6447 DOHH2_400M_050219_2,6447,AELDRQIKSF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6448 34.545 800.0 140350.0 25 0 7442.1 + 37089 TGNPTVIKM 9 156 480.762508903865 959.51046487453 2 480.7627746462822 MULTI CID FTMS 0 0 0 6437 149149.984375 1.0 0 0.0 11 Unmodified _TGNPTVIKM_ ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2;ENST00000512383.1_1_5:75964652-75969784:+|nuORF;nc|ENSG00000145703|Q13576-2|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2 32.037481411007896 0.1235546156350648 2 TGNP{[TV]|[{I|L}S]}{I|L}KM 9 0 + 61.943 0.0 0.0 6.4556 6.4556 88.881 0.0 0.0 0.0 27.89663290566388 12.587418566968154 12.587418566968154 9.208187539523747 0 0.7478499570595205 1.154901959985743 0.0 0.2614393726401688 + + TGNP{[TV]|[{I|L}S]}{I|L}KM;TGGGP{[TV]|[{I|L}S]}{I|L}KM;{[TV]|[{I|L}S]}P[YQ]QKP;[TP]V[YQ]QKP;{[TV]|[{I|L}S]}P[YQ][AG]KP 6.4556;5.496;1.7564;0.93786;0.7911 +;-;-;-;- + 312 + 1 1.847 89038.7 0.5899999737739563 3043 3403 6437 DOHH2_400M_050219_2,6448 DOHH2_400M_050219_2,6448,TGNPTVIKM True True TGNPTVIKM 34.544514 480.762774646282 929405.125 6437.0 ENST00000512383.1_1_5:75964652-75969784:+|nuORF;;nc|ENSG00000145703|Q13576-3|IQGAP2;;ENSG00000140575|ENST00000268182|IQGAP1;;nc|ENSG00000145703|Q13576-2|IQGAP2;;ENSG00000145703|ENST00000274364|IQGAP2 5.9776991208394366 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6449 34.549 231.0 258070.0 25 0 35706.0 + 84 AAGPRPMAL 9 92 442.2436914452956 0 442.2444030642509 PEAK CID FTMS 0 0 0 6437 143468.671875 1.0 0 0.0 12 Unmodified _AAGPRPMAL_ ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42 30.22481116460888 0.1097735003385577 2 A 1 8 9.732 0.0 0.0 1.1028 0.0 0.0 680.340396951335 128.07196985416252 808.4123668054975 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + A 1.1028 + + 28 + 1 1.847 55661.6 1.0 3044 3403 6437 DOHH2_400M_050219_2,6449 DOHH2_400M_050219_2,6449,AAGPRPMAL True True AAGPRPMAL 34.54885 442.244403064251 901607.25 6437.0 ENSG00000126254|ENST00000262633|RBM42;;nc|ENSG00000126254|Q9BTD8-2|RBM42;;nc|ENSG00000126254|Q9BTD8-3|RBM42 4.312607526779175 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6450 34.563 800.0 247790.0 25 0 20659.0 + 7075 EELLTDNRY 9 161 576.7779875723481 0 576.7805053591728 PEAK CID FTMS 0 0 0 6437 138533.890625 0.7224943589308982 -1 0.1234283447265625 13 Unmodified _EELLTDNRY_ ENSG00000167881|ENST00000307877|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68 88.95385435242217 0.0132320582448001 2 {I|L}{I|L}TDN 5 4 46.983 0.0 0.0 4.08 0.0 0.0 258.08034544192145 334.15204797916255 592.232393421084 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.7742275032520141 1.0 + {I|L}{I|L}TDN 4.08 + + 150 + 1 1.847 149058.2 0.6499999761581421 3045 3403 6437 DOHH2_400M_050219_2,6450 DOHH2_400M_050219_2,6450,EELLTDNRY True True EELLTDNRY 34.562681 576.780505359173 339820.125 6437.0 ENSG00000167881|ENST00000307877|SRP68;;nc|ENSG00000167881|Q9UHB9-2|SRP68 5.45018212000529 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6451 34.567 166.0 255520.0 25 0 23130.0 462 AEFQSPKY 8 80 485.2377630199592 968.4609731067184 2 485.2386352419853 MULTI CID FTMS 0 0 0 6437 119586.5390625 0.5989923033378499 2 -0.2681770324707031 14 Unmodified _AEFQSPKY_ ENSG00000055955|ENST00000266041|ITIH4;ENST00000468472.1_1_3:52853923-52864679:-|nuORF;nc|ENSG00000055955|Q14624-2|ITIH4;nc|ENSG00000055955|Q14624-3|ITIH4;nc|ENSG00000055955|Q14624-4|ITIH4 9.347437153973935 0.7675937258251505 2 Y 1 7 12.474 0.0 0.0 1.288 0.0 0.0 787.3869354864045 0.0 787.3869354864045 0.0 1.054266826574466 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.288 + + 37 + 1 1.847 38923.0 1.0 3046 3403 6437 DOHH2_400M_050219_2,6451 DOHH2_400M_050219_2,6451,AEFQSPKY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6452 34.581 800.0 208530.0 25 0 14856.0 -1 RRCNQCQPGFY 11 138 743.32504012141 1484.63552730962 2 743.3241454958916 MULTI CID FTMS 0 0 0 6437 85393.7890625 0.5747917259141216 -2 0.2390403747558593 15 2 Carbamidomethyl (C) _RRC(Carbamidomethyl (C))NQC(Carbamidomethyl (C))QPGFY_ ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-2|USH2A;nc|ENSG00000042781|O75445-3|USH2A 6.2057823575117 0.8458686499021061 2 {[QG]|[NA]}GAMAEAQQNA{M(Oxidation (M))|F}Y 14 -1 + 85.64 0.0 0.0 5.7684 5.7684 80.924 0.0 0.0 0.0 3.8684132427059126 41.23306177672768 3.8684132427059126 4.638915694969683 0 1.4177353201839438 0.958607314841775 0.0 1.7474250108400469 {[QG]|[NA]}GAMAEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QMAEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AMAEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAMAEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAMAEA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAMAEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQNA{M(Oxidation (M))|F}Y;[NP]{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C))AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QMAEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QMAEA[AG]QNA{M(Oxidation (M))|F}Y 5.7684;5.456;5.2882;5.1588;5.1588;5.1588;5.1526;4.9913;4.8449;4.8449 -;-;-;-;-;-;-;-;-;- 5251 1 1.847 118165.5 0.4600000083446502 3047 3403 6437 DOHH2_400M_050219_2,6452 DOHH2_400M_050219_2,6452,RRCNQCQPGFY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6453 34.595 800.0 214310.0 25 0 20013.0 + 39691 VEFAPVLLL 9 157 500.8057734085036 0 500.8059570193291 PEAK CID FTMS 0 0 0 6437 83708.625 1.0 0 0.0 16 Unmodified _VEFAPVLLL_ ENSG00000105695|ENST00000392213|MAG;nc|ENSG00000105695|P20916-2|MAG;nc|ENSG00000105695|P20916-3|MAG 44.40701690623563 0.0469661192146891 2 D 1 9 10.044 0.0 0.0 1.0048 0.0 0.0 799.480643641423 82.06686578922108 881.547509430644 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 D 1.0048 - 252 + 1 1.847 134644.6 0.4399999976158142 3048 3403 6437 DOHH2_400M_050219_2,6453 DOHH2_400M_050219_2,6453,VEFAPVLLL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6454 34.609 800.0 95822.0 25 0 9291.6 -1 LIECTDTFCTY 11 107 711.800105967729 1421.585659002258 2 711.7990600466728 MULTI CID FTMS 0 0 0 6437 85241.1171875 1.0 0 0.0 17 2 Carbamidomethyl (C) _LIEC(Carbamidomethyl (C))TDTFC(Carbamidomethyl (C))TY_ ENSG00000168282|ENST00000305386|MGAT2 3.5964929083625545 0.858179447565866 2 A{M(Oxidation (M))|F}DEAQQNA{M(Oxidation (M))|F}Y 11 -1 63.876 0.0 0.0 4.4933 0.0 0.0 119.07386977363436 0.0 119.07386977363436 0.0 37.16194137001701 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.3494850021680094 A{M(Oxidation (M))|F}DEAQQNA{M(Oxidation (M))|F}Y 4.4933 - 603 1 1.847 60655.8 0.4600000083446502 3049 3403 6437 DOHH2_400M_050219_2,6454 DOHH2_400M_050219_2,6454,LIECTDTFCTY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6455 34.624 800.0 93649.0 25 0 16013.0 + -1 QENEDGYRW 9 105 598.9416564269046 1793.8031398809137 3 598.9416381716728 MULTI CID FTMS 0 0 0 6437 73331.359375 1.0 0 0.0 18 nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-2|TUT7;ENSG00000083223|ENST00000375963|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 2 {[QS]|[NT]}Y{I|L} 4 -1 29.94 0.0 0.0 1.6691 0.0 0.0 0.0 1299.5403584690575 1299.5403584690575 0.3700572300447327 0.0 0.0 0.0 0 0.0 0.619788758288394 0.3807196863200844 0.6747425010840047 {[QS]|[NT]}Y{I|L} 1.6691 - 463 1 1.847 63172.0 0.4600000083446502 3050 3403 6437 DOHH2_400M_050219_2,6455 DOHH2_400M_050219_2,6455, False False QENEDGYRW 34.623607 598.941638171673 112321.0703125 6437.0 nc|ENSG00000083223|Q5VYS8-5|TUT7;;nc|ENSG00000083223|Q5VYS8-4|TUT7;;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;;nc|ENSG00000083223|Q5VYS8-3|TUT7;;nc|ENSG00000083223|Q5VYS8-2|TUT7;;ENSG00000083223|ENST00000375963|TUT7;;nc|ENSG00000083223|Q5VYS8-6|TUT7 2.8178948561350503 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6456 34.637 800.0 258190.0 25 0 29311.0 + -1 AEAPGGELM 9 137 874.4129076799412 0 874.3980590701103 PEAK CID FTMS 0 0 0 -1 0 19 2 Carbamidomethyl (C) _WRREC(Carbamidomethyl (C))PRWWRC(Carbamidomethyl (C))_ nc|ENSG00000173418|P61599-2|NAA20;ENSG00000173418|ENST00000334982|NAA20 1.1933415558491238 0.4761840153648598 2 PN{I|L}NA[R{M(Oxidation (M))|F}]A[YV]E 11 -1 48.491 0.0 0.0 2.776 0.0 0.0 261.0858610720016 208.0730379693969 469.1588990413985 0.0 0.0 0.0 0.0 0 1.110924374808178 0.0 0.9386218330464624 0.805462187404089 PN{I|L}NA[R{M(Oxidation (M))|F}]A[YV]E 2.776 - 6567 + 1 1.847 139289.8 0.8799999952316284 3051 3403 6437 DOHH2_400M_050219_2,6456 DOHH2_400M_050219_2,6456,WRRECPRWWRC False False AEAPGGELM 34.637455 874.39805907011 6400248.5 6437.0 nc|ENSG00000173418|P61599-2|NAA20;;ENSG00000173418|ENST00000334982|NAA20 6.734816710154216 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6457 34.642 241.0 304140.0 25 0 117100.0 + -1 QPPRPPLP 8 79 472.2727239866656 0 472.2724487185478 PEAK CID FTMS 0 0 0 6437 168961.515625 0.9141003093483734 2 -0.2681770324707031 20 Acetyl (Protein N-term) _(Acetyl (Protein N-term))QPPRPPLP_ REV__ENST00000257552.6_1_12:120779899-120780196:-|nuORF;REV__ENST00000551489.5_1_12:107349705-107350883:+|nuORF 6.354104778181461 0.5763711549229614 2 QPE 3 -1 13.857 0.0 0.0 1.4701 0.0 0.0 489.2758616014919 96.08238397769765 585.3582455791895 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 QPE 1.4701 - 18 + 1 1.847 61654.7 1.0 3052 3403 6437 DOHH2_400M_050219_2,6457 DOHH2_400M_050219_2,6457,QPPRPPLP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6459 34.648 73.0 975050.0 25 0 463400.0 + 10471 FTKFCQGCKW 10 61 416.5278117557482 1246.5616058674443 3 416.5277282595634 MULTI CID FTMS 0 0 0 6458 297342.96875 0.2596550167718752 1 -0.1152572631835937 1 Unmodified _FTKFCQGCKW_ REV__ENSG00000061455|ENST00000407847|PRDM6;REV__nc|ENSG00000061455|Q9NQX0-1|PRDM6 3.876331618118854 0.7087061897849828 2 W 1 -1 14.604 0.0 0.0 1.1716 0.0 0.0 1042.4713939307242 0.0 1042.4713939307242 0.0 4.423032906489652 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1716 + + 24 + 1 1.854 63623.2 1.0 3053 3404 6458 DOHH2_400M_050219_2,6459 DOHH2_400M_050219_2,6459,FTKFCQGCKW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6460 34.649 85.0 496020.0 25 0 24290.0 + 2711 ATETQPIVY 9 93 511.2633611973749 1020.5121694615498 2 511.2637512087822 MULTI CID FTMS 0 0 0 6458 190836.71875 0.1902954708570149 1 -0.1152572631835937 2 Unmodified _ATETQPIVY_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 11.640296217721598 0.521594087909532 2 {[DA]|[EG]}E 3 7 22.676 0.0 0.0 2.222 0.0 0.0 0.0 702.3821395145372 702.3821395145372 3.2121122500096533 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}E 2.222 - 82 1 1.854 39600.4 1.0 3054 3404 6458 DOHH2_400M_050219_2,6460 DOHH2_400M_050219_2,6460,ATETQPIVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6461 34.651 51.0 1182800.0 25 0 71171.0 + 35381 STELNHLGY 9 89 517.2509571974014 1032.4873614616026 2 517.2510864138603 MULTI CID FTMS 0 0 0 6458 1040664.9375 0.5238232596915381 -1 0.1529197692871093 3 Unmodified _STELNHLGY_ ENSG00000140983|ENST00000315082|RHOT2;ENST00000568636.5_1_16:720997-722003:+|nuORF;ENST00000569358.5_1_16:720997-722561:+|nuORF;ENST00000602564.5_1_16:720997-722561:+|nuORF 74.92900055777586 0.0191935851694334 2 {[MG]|[TS]}E{I|L}NH{I|L}GY 9 0 + 59.759 0.0 0.0 5.7879 5.7879 83.661 0.0 0.0 0.0 7.147642715192504 8.76354880917635 7.147642715192504 6.989700043360188 0 1.566901560044258 0.0 0.4247425010840047 0.0 + + {[MG]|[TS]}E{I|L}NH{I|L}GY;{[MG]|[TS]}E{I|L}HN{I|L}GY;{[MG]|[TS]}EH{I|L}N{I|L}GY;[H{I|L}]NE{I|L}G{[MG]|[TS]}Y;{[MG]|[TS]}E{I|L}GGH{I|L}GY;[H{I|L}]NE{I|L}GY{[MG]|[TS]};[H{I|L}]N{I|L}EG{[MG]|[TS]}Y;[H{I|L}]NE{I|L}[MN]Y;[HN]{I|L}E{I|L}G{[MG]|[TS]}Y;[H{I|L}]N{I|L}EGY{[MG]|[TS]} 5.7879;5.1109;4.9404;4.9391;4.8961;4.7947;4.4339;4.4051;4.3547;4.2894 +;-;-;-;-;-;-;-;-;- + 874 + 1 1.854 50021.5 1.0 3055 3404 6458 DOHH2_400M_050219_2,6461 DOHH2_400M_050219_2,6461,STELNHLGY True True STELNHLGY 34.650807 517.25108641386 10555337.0 6458.0 ENST00000602564.5_1_16:720997-722561:+|nuORF;;ENSG00000140983|ENST00000315082|RHOT2;;ENST00000569358.5_1_16:720997-722561:+|nuORF;;ENST00000568636.5_1_16:720997-722003:+|nuORF 6.909350236256917 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6462 34.652 60.0 664430.0 25 0 66153.0 2878 AVDPTSGQLY 10 71 525.7585991896497 1049.5026454460992 2 525.7589599490166 MULTI CID FTMS 0 0 0 6458 911548.8125 0.0925874968474706 4 -0.5121841430664062 4 Unmodified _AVDPTSGQLY_ ENSG00000132182|ENST00000254508|NUP210 26.88365393820708 0.3646707531412818 2 {[VA]|[{I|L}G]}D{[QG]|[NA]}D{I|L}G{I|L}Y 10 5 + 53.534 0.0 0.0 5.1009 5.1009 76.412 0.0 0.0 0.0 3.0102999566398125 11.20506544868192 3.0102999566398125 3.0102999566398125 0 0.8935078169319297 1.5228787452803376 0.6694451763165201 0.0 {[VA]|[{I|L}G]}D{[QG]|[NA]}D{I|L}G{I|L}Y;{[VA]|[{I|L}G]}D{[QG]|[NA]}{I|L}DG{I|L}Y;[TP]S{[QG]|[NA]}D{I|L}G{I|L}Y;{[VA]|[{I|L}G]}Q[DG]D{I|L}G{I|L}Y;[TP]S{[QG]|[NA]}{I|L}DG{I|L}Y;{[VA]|[{I|L}G]}Q[DG]{I|L}DG{I|L}Y;{[VA]|[{I|L}G]}[AG][DG]D{I|L}G{I|L}Y;{[VA]|[{I|L}G]}[AG][DG]{I|L}DG{I|L}Y;{[QG]|[NA]}S[TP]D{I|L}G{I|L}Y;{[QG]|[NA]}{[DA]|[EG]}VD{I|L}G{I|L}Y 5.1009;4.8141;4.8141;4.539;4.5273;4.2522;3.6658;3.3789;2.9638;2.8447 -;-;-;-;-;-;-;-;-;- 166 1 1.854 35913.4 1.0 3056 3404 6458 DOHH2_400M_050219_2,6462 DOHH2_400M_050219_2,6462,AVDPTSGQLY False True AVQDDLGGIY 34.652301 525.758959949017 95644112.0 6458.0 nc|ENSG00000134909|A7KAX9|ARHGAP32;;nc|ENSG00000134909|A7KAX9-2|ARHGAP32;;ENSG00000134909|ENST00000682385|ARHGAP32 4.601435263951619 2.0 False 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6463 34.654 96.0 612300.0 25 0 58011.0 + 24478 MIEPRTLQY 9 80 583.797370107426 1165.580187281652 2 583.7975952029228 MULTI CID FTMS 0 0 0 6458 511791.875 0.2195992314763037 5 -0.6166114807128906 5 Oxidation (M) _M(Oxidation (M))IEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 51.629811660486645 0.0367964933207742 2 {M(Oxidation (M))|F}{I|L}E[NP]KKQY 9 3 + 51.321 0.0 0.0 4.4031 4.4031 86.319 0.0 0.0 0.0 19.638787285696964 14.906812209816636 14.906812209816636 45.98136244196333 0 1.774227503252014 0.0 0.3494850021680094 0.7742275032520141 {M(Oxidation (M))|F}{I|L}E[NP]KKQY;{M(Oxidation (M))|F}{I|L}[WH][Q{I|L}][WH] 4.4031;0.45813 -;- 135 + 1 1.854 50603.1 1.0 3057 3404 6458 DOHH2_400M_050219_2,6463 DOHH2_400M_050219_2,6463,MIEPRTLQY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6464 34.657 137.0 502610.0 25 0 44273.0 + 25599 NFLEKRAL 8 87 495.790433229357 989.566313525514 2 495.7903625369072 MULTI CID FTMS 0 0 0 6458 346171.65625 1.0 0 0.0 6 Unmodified _NFLEKRAL_ ENSG00000144354|ENST00000306721|CDCA7;ENST00000435616.5_1_2:174224078-174228757:+|nuORF;ENST00000496441.5_1_2:174219691-174228743:+|nuORF;nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1-4|CDCA7;nc|ENSG00000144354|Q9BWT1-5|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7 36.12702656103203 0.299085846329477 2 N{I|L}{M(Oxidation (M))|F}EK 5 5 50.644 0.0 0.0 5.1178 0.0 0.0 0.0 355.21113001041255 355.21113001041255 39.22383383147447 0.0 0.0 0.0 0 0.4247425010840047 0.958607314841775 0.4247425010840047 0.0 N{I|L}{M(Oxidation (M))|F}EK 5.1178 - 178 + 1 1.854 57976.1 1.0 3058 3404 6458 DOHH2_400M_050219_2,6464 DOHH2_400M_050219_2,6464,NFLEKRAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6465 34.659 91.0 584500.0 25 0 48104.0 + 44917 YPPPHQVF 8 82 492.7500487937923 983.4855446543846 2 492.7504150271416 MULTI CID FTMS 0 0 0 6458 348428.75 0.6125030447384557 1 -0.1152572631835937 7 Unmodified _YPPPHQVF_ ENSG00000076248|ENST00000242576|UNG;ENST00000540158.1_1_12:109535484-109537104:+|nuORF;nc|ENSG00000076248|P13051-2|UNG 30.22481116460888 0.4082965392918993 2 YPPPPT 6 4 58.589 0.0 0.0 5.9572 0.0 0.0 0.0 328.1418551080688 328.1418551080688 42.023853068591706 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 YPPPPT 5.9572 - 284 + 1 1.854 46845.2 1.0 3059 3404 6458 DOHH2_400M_050219_2,6465 DOHH2_400M_050219_2,6465,YPPPHQVF False True YPPPHQVF 34.65917 492.750415027142 9013411.5 6458.0 ENST00000540158.1_1_12:109535484-109537104:+|nuORF;;ENSG00000076248|ENST00000242576|UNG;;nc|ENSG00000076248|P13051-2|UNG 6.265776634216309 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6466 34.665 341.0 214700.0 25 0 14882.0 -1 0 79 918.4193950315004 1834.8242371298008 2 918.9213744997978 MULTI CID FTMS 0 0 0 6458 292953.34375 0.2696710260453487 4 -0.5121841430664062 8 2 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 42.268 0.0 0.0 2.3036 0.0 0.0 949.463004856722 0.0 949.463004856722 0.0 22.84318117920506 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.805462187404089 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.3036 - 220 1 1.854 51912.5 1.0 3060 3404 6458 DOHH2_400M_050219_2,6466 DOHH2_400M_050219_2,6466, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6467 34.668 155.0 376590.0 25 0 68242.0 + 45271 YSDKYFDEHY 10 71 456.1910627873616 1365.551358962285 3 456.1905700564384 MULTI CID FTMS 0 0 0 6458 248562.609375 0.0838232770456516 4 -0.5121841430664062 9 Unmodified _YSDKYFDEHY_ chr9:89311345-89315170|10|74.8|0.14|9.01|+|1|None,CKS2|1;ENSG00000123975|ENST00000314355|CKS2 27.088373467376528 0.3600710273140457 2 Y{M(Oxidation (M))|F}DEHY 6 4 44.27 0.0 0.0 3.2419 0.0 0.0 493.2170615162167 0.0 493.2170615162167 0.0 37.28003114098954 0.0 0.0 0 0.25 0.0 0.6643943297944485 0.0 + Y{M(Oxidation (M))|F}DEHY 3.2419 + + 121 + 1 1.854 50792.3 1.0 3061 3404 6458 DOHH2_400M_050219_2,6467 DOHH2_400M_050219_2,6467,YSDKYFDEHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6468 34.674 327.0 299470.0 25 0 24448.0 + 14512 IGQIKRIL 8 102 470.81875223400897 939.622951534818 2 470.8186218142509 MULTI CID FTMS 0 0 0 6458 220430.515625 0.0717106529662108 4 -0.5121841430664062 10 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 16.942295170755138 0.6606234159769251 2 K{I|L}K[R{I|L}]{I|L} 6 -1 28.365 0.0 0.0 3.0188 0.0 0.0 170.06918324157851 0.0 170.06918324157851 0.0 16.582138678279374 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.4247425010840047 K{I|L}K[R{I|L}]{I|L} 3.0188 - 68 + 1 1.854 77677.0 1.0 3062 3404 6458 DOHH2_400M_050219_2,6468 DOHH2_400M_050219_2,6468,IGQIKRIL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6469 34.678 167.0 711940.0 25 0 51859.0 + 32899 SEINKPNFY 9 111 556.2745782313033 1110.5346035294065 2 556.2751342654228 MULTI CID FTMS 0 0 0 6458 221331.71875 0.0768949451337825 -2 0.2763481140136719 11 Unmodified _SEINKPNFY_ ENSG00000067334|ENST00000436063|DNTTIP2 61.357469665136826 0.0253304979873734 2 {[ES]|[DT]|[{I|L}C]}{I|L}NK[NP]{M(Oxidation (M))|F}Y 9 0 + 50.314 0.0 0.0 4.5306 4.5306 81.628 0.0 0.0 0.0 26.45796166923517 8.44140861380339 8.44140861380339 9.208187539523747 0 0.9916440611282626 0.0 0.0 1.055462187404089 + + {[ES]|[DT]|[{I|L}C]}{I|L}NK[NP]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}GGK[NP]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}NK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]};{[ES]|[DT]|[{I|L}C]}{I|L}[EP]RA{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}GGK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]};{[ES]|[DT]|[{I|L}C]}Q[NP]RA{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}K[NP]RA{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}[TP][QP]W[PG];[QA]AE[VG]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}N{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[HD] 4.5306;3.7015;3.2511;2.713;2.4219;1.5529;1.5529;1.1676;1.1574;1.0416 +;-;-;-;-;-;-;-;-;- + 1090 + 1 1.854 92582.5 1.0 3063 3404 6458 DOHH2_400M_050219_2,6469 DOHH2_400M_050219_2,6469,SEINKPNFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6470 34.691 800.0 232310.0 25 0 29345.0 + 8391 ESEDPDYYQY 10 156 654.7489205402829 1307.4832881473658 2 654.7487670779228 MULTI CID FTMS 0 0 0 6458 197766.109375 0.0210102576285191 8 -0.833526611328125 12 Unmodified _ESEDPDYYQY_ ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I 69.10491478415734 0.0189654488676922 2 [DP]DDTEYYQY 10 5 + 63.968 0.0 0.0 4.8925 4.8925 75.903 0.0 0.0 0.0 13.922346093281718 15.02697515943352 13.922346093281718 3.2921156682918777 0 0.75 0.8239087409443188 1.8288245576287263 0.0 [DP]DDTEYYQY;[DP]YESDEYQY;[DP]DDTYEYQY;[DP]YDTDEYQY;[DP]DQGC(Carbamidomethyl (C))YYQY;[DP]YEDSEYQY;[DP]YDESEYQY;[DP]YSEDEYQY;[DP]NEGC(Carbamidomethyl (C))YYQY;[DP]YY[C(Carbamidomethyl (C))H]YQY 4.8925;4.6407;4.5646;4.506;4.4885;4.4798;4.3451;4.3363;4.3026;4.2925 -;-;-;-;-;-;-;-;-;- 4130 1 1.854 134059.5 0.8299999833106995 3064 3404 6458 DOHH2_400M_050219_2,6470 DOHH2_400M_050219_2,6470,ESEDPDYYQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6471 34.694 117.0 389500.0 25 0 21824.0 + 38622 TTEVHPELY 9 90 544.767100325284 1087.519647717368 2 544.7691528201103 MULTI CID FTMS 0 0 0 6458 179378.03125 0.1775445728325019 5 -0.6166114807128906 13 Unmodified _TTEVHPELY_ ENSG00000125991|ENST00000348547|ERGIC3;ENST00000486268.5_1_20:34129846-34130758:+|nuORF;nc|ENSG00000125991|Q9Y282-2|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3 34.10243960390752 0.1078313939113124 2 {[DS]|[MA]|[CV]|TT}E[HV][EP]{I|L}Y 9 0 + 21.813 0.0 0.0 2.0058 2.0058 70.757 0.0 0.0 0.0 0.8438527343788884 12.543593042850642 0.8438527343788884 5.6246936830415 0 0.566901560044258 0.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}E[HV][EP]{I|L}Y;{[DS]|[MA]|[CV]|TT}E[DP][H{I|L}]{I|L}Y;{[DS]|[MA]|[CV]|TT}E[{I|L}V]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}Y;{[DS]|[MA]|[CV]|TT}E[HV][EP]Y{I|L};{[DS]|[MA]|[CV]|TT}E[DP][H{I|L}]Y{I|L} 2.0058;1.4885;1.2563;0.58595;0.068742 +;-;-;-;- + 110 + 1 1.854 40519.8 1.0 3065 3404 6458 DOHH2_400M_050219_2,6471 DOHH2_400M_050219_2,6471,TTEVHPELY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6472 34.702 432.0 272340.0 25 0 32638.0 + 35369 STDPSVLGKY 10 150 533.7735832088263 1065.5326134844524 2 533.7736083865166 MULTI CID FTMS 0 0 0 6458 181185.078125 0.1953242857699201 1 -0.1152572631835937 14 Unmodified _STDPSVLGKY_ ENSG00000114315|ENST00000232424|HES1 41.95555342248728 0.1369168616057562 2 {[MG]|[TS]}DP[VS]{I|L}KGY 10 2 + 41.877 0.0 0.0 3.9301 3.9301 73.897 0.0 0.0 0.0 28.723841573705243 15.026975159433531 15.026975159433531 4.771212547196626 0 0.5501648626366046 0.0 0.0 0.0 {[MG]|[TS]}DP[VS]{I|L}KGY;{[MG]|[TS]}DP[VS]{I|L}GKY;{[MG]|[TS]}DP[VS]K{I|L}GY;{[MG]|[TS]}[{I|L}T]{I|L}GS[PA]GY;{[MG]|[TS]}DP[VS]K[VS]{M(Oxidation (M))|F};{[MG]|[TS]}D[KT]H{I|L}PAP;{[MG]|[TS]}[{I|L}T]S[QP]{I|L}GY;{[MG]|[TS]}DP[VS]K[YG]{I|L};{[MG]|[TS]}{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}GY;[H{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YG]{I|L}GY 3.9301;3.4824;3.4195;1.2504;1.2131;1.0988;1.0153;0.91285;0.89303;0.72198 -;+;-;-;-;-;-;-;-;- + 1389 + 1 1.854 92699.0 1.0 3066 3404 6458 DOHH2_400M_050219_2,6472 DOHH2_400M_050219_2,6472,STDPSVLGKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6473 34.709 389.0 327880.0 25 0 43073.0 + 5282 DLAEHHMF 8 113 500.2211038131592 998.4276546931184 2 500.2207214236259 MULTI CID FTMS 0 0 0 6458 167507.765625 1.0 0 0.0 15 Unmodified _DLAEHHMF_ ENSG00000065268|ENST00000585809|WDR18;ENST00000591276.1_1_19:990686-991256:+|nuORF 53.57557251787612 0.1224291679108181 2 {NN|[MP]|[D{I|L}]|[EV]}AEHHM{M(Oxidation (M))|F} 8 0 + 64.09 0.0 0.0 6.4191 6.4191 87.491 0.0 0.0 0.0 26.989700043360187 9.163865622122673 9.163865622122673 9.163865622122673 0 1.4731975075880328 2.0 0.3494850021680094 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}AEHHM{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}AEH{M(Oxidation (M))|F}[HM];{NN|[MP]|[D{I|L}]|[EV]}AE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NY;{NN|[MP]|[D{I|L}]|[EV]}AEH{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[PG];{NN|[MP]|[D{I|L}]|[EV]}AE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GGY;{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}HSY;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}HSY;{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}HYS;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}HYS;HHEAMPM{M(Oxidation (M))|F} 6.4191;5.5013;5.2171;4.4595;4.2894;3.999;3.9761;3.5376;3.5147;2.8829 +;-;-;-;-;-;-;-;-;- + 482 + 1 1.854 99857.6 1.0 3067 3404 6458 DOHH2_400M_050219_2,6473 DOHH2_400M_050219_2,6473,DLAEHHMF True True DLAEHHMF 34.708586 500.221 4138734.75 6458.0 ENSG00000065268|ENST00000585809|WDR18;;ENST00000591276.1_1_19:990686-991256:+|nuORF 6.834169546763103 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6474 34.724 800.0 157120.0 25 0 8315.8 + 25480 NELDAVQREY 10 139 618.7962597053777 1235.5779664775553 2 618.7967407107353 MULTI CID FTMS 0 0 0 6458 162889.71875 0.2326181195640134 5 -0.6166114807128906 16 Unmodified _NELDAVQREY_ ENSG00000080986|ENST00000261597|NDC80 62.86856922530385 0.0290614069976636 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVQREY 10 0 + 60.263 0.0 0.0 4.8773 4.8773 73.028 0.0 0.0 0.0 7.269987279362624 7.805912097059327 7.269987279362624 1.2057393120584905 0 1.6989700043360187 0.0 0.5649093276264391 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVQREY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVQVGEY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAR{I|L}NEY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAV[AG]REY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVPSA{[SA]|[TG]}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAV[AG]VGEY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}WVQVGEY;GGE{I|L}DAR{I|L}NEY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVPS[QT]Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DAVP[C(Carbamidomethyl (C))R]Y 4.8773;4.7798;4.2456;4.1356;4.104;4.041;3.9038;3.847;3.8126;3.6521 +;-;-;-;-;-;-;-;-;- + 1172 + 1 1.854 95712.6 0.7599999904632568 3068 3404 6458 DOHH2_400M_050219_2,6474 DOHH2_400M_050219_2,6474,NELDAVQREY True True NELDAVQREY 34.723594 618.796740710735 4068029.0 6458.0 ENSG00000080986|ENST00000261597|NDC80 7.846643447875977 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6475 34.732 491.0 128010.0 25 0 8012.4 -1 0 87 925.428038417162 1848.841523901124 2 925.9299804568292 MULTI CID FTMS 0 0 0 6458 149007.25 0.4257724071471994 1 -0.1152572631835937 17 2 [NP]{I|L}N{M(Oxidation (M))|F}A[RH]AEN{I|L}DP{[QN]|[E{I|L}]|[KN]} 16 -1 + 54.11 0.0 0.0 2.9267 2.9267 73.767 0.0 0.0 0.0 12.62897816467973 41.87385745994302 12.62897816467973 6.989700043360188 0 0.3182503180159344 0.8860566476931632 0.3807196863200844 0.0 [NP]{I|L}N{M(Oxidation (M))|F}A[RH]AEN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}DP{[QN]|[E{I|L}]|[KN]} 2.9267;2.5486 -;- 536 1 1.854 47764.7 1.0 3069 3404 6458 DOHH2_400M_050219_2,6475 DOHH2_400M_050219_2,6475, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6476 34.737 249.0 199480.0 25 0 21626.0 + -1 DKMSIMEGSL 10 84 571.7588156163637 1141.5030782995273 2 572.7781860232353 MULTI CID FTMS 0 0 0 -1 0 18 2 Oxidation (M) _DKM(Oxidation (M))SIM(Oxidation (M))EGSL_ REV__ENSG00000152315|ENST00000282146|KCNK13 10.073929032068715 0.6785112666868882 2 Y 1 -1 13.495 0.0 0.0 1.1822 0.0 0.0 960.4288575737444 0.0 960.4288575737444 0.0 0.9589312379109992 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1822 - 60 + 1 1.854 45527.3 1.0 3070 3404 6458 DOHH2_400M_050219_2,6476 DOHH2_400M_050219_2,6476,DKMSIMEGSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6477 34.751 800.0 101190.0 25 0 6428.5 + 45273 YSDKYFDEHY 10 133 683.7831317514245 1365.551710569649 2 683.7827026247978 MULTI CID FTMS 0 0 0 6458 90154.359375 0.0620270739557969 4 -0.5121841430664062 19 Unmodified _YSDKYFDEHY_ chr9:89311345-89315170|10|74.8|0.14|9.01|+|1|None,CKS2|1;ENSG00000123975|ENST00000314355|CKS2 64.68765255105646 0.0242896258970391 2 YSDKY{M(Oxidation (M))|F}DEHY 10 0 + 101.46 0.0 0.0 7.4297 7.4297 87.205 0.0 0.0 0.0 30.51152522447381 6.020599913279625 6.020599913279625 6.020599913279625 0 1.8098943791441968 1.3979400086720375 0.805462187404089 0.0 + + YSDKY{M(Oxidation (M))|F}DEHY;YSDKY{M(Oxidation (M))|F}DENW;YSDKY{M(Oxidation (M))|F}DEYH;YSDKY{M(Oxidation (M))|F}DEGGW;YSDKY{M(Oxidation (M))|F}[EC]S[QP];[VG]SS[EC]{M(Oxidation (M))|F}YKDTM;{[ES]|[DT]|[{I|L}C]}[KC]D{M(Oxidation (M))|F}YKDTM;{[ES]|[DT]|[{I|L}C]}M{[QS]|[NT]}{M(Oxidation (M))|F}YKDTM;{[MG]|[TS]}AA[EC]{M(Oxidation (M))|F}YKDTM;Y{[{M(Oxidation (M))|F}H]|[RQ]}D{M(Oxidation (M))|F}K{M(Oxidation (M))|F}MTM 7.4297;6.9888;6.8973;6.3177;4.1638;2.9957;2.5658;1.4477;1.2109;1.1978 +;-;-;-;-;-;-;-;-;- + 626 + 1 1.854 64115.4 0.6100000143051147 3071 3404 6458 DOHH2_400M_050219_2,6477 DOHH2_400M_050219_2,6477,YSDKYFDEHY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6478 34.757 287.0 224680.0 25 0 15679.0 + 16667 KEMLPSYHKW 10 90 440.22617240989416 1317.6566878298825 3 440.2256957888603 MULTI CID FTMS 0 0 0 6458 85768.71875 0.7503276670305626 -1 0.1529197692871093 20 Unmodified _KEMLPSYHKW_ ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188 28.181266145913348 0.3355154477840527 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}MSP 7 7 30.01 0.0 0.0 2.2775 0.0 0.0 0.0 498.24260085973714 498.24260085973714 14.525166531265723 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}MSP 2.2775 - 158 1 1.854 60493.3 1.0 3072 3404 6458 DOHH2_400M_050219_2,6478 DOHH2_400M_050219_2,6478,KEMLPSYHKW False True KEMLPSYHKW 34.757225 440.22569578886 1056110.625 6458.0 ENST00000477069.5_1_9:131747266-131765892:+|nuORF;;ENSG00000095319|ENST00000372577|NUP188;;nc|ENSG00000095319|Q5SRE5-2|NUP188 7.158193588256836 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6480 34.763 63.0 817310.0 25 0 75219.0 + 7071 EELLGDGHSY 10 97 560.2511627305616 1118.4877725279232 2 560.2507812380791 MULTI CID FTMS 0 0 0 6479 292683.625 0.0164459326152159 4 -0.5013542175292969 1 Unmodified _EELLGDGHSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000495288.5_1_1:151372054-151373071:+|nuORF 52.268347100219714 0.0668375294751462 2 EE{I|L} 3 7 37.492 0.0 0.0 3.352 0.0 0.0 0.0 744.2962191434107 744.2962191434107 18.332975692131885 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.805462187404089 0.0 + EE{I|L} 3.352 + + 161 1 1.866 46529.9 1.0 3073 3405 6479 DOHH2_400M_050219_2,6480 DOHH2_400M_050219_2,6480,EELLGDGHSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6481 34.765 94.0 597040.0 25 0 65369.0 + 723 AEPLPRNGDQW 11 76 641.8122875110138 1281.6100220888277 2 641.8124267458916 MULTI CID FTMS 0 0 0 6479 367019.46875 0.1287476695320858 3 -0.3969268798828125 2 Unmodified _AEPLPRNGDQW_ ENSG00000166483|ENST00000450114|WEE1;nc|ENSG00000166483|P30291-2|WEE1 21.59015148037692 0.5852593066373742 2 {[CP]|[EA]}P{I|L} 4 7 21.682 0.0 0.0 1.6918 0.0 0.0 0.0 868.36991921987 868.36991921987 7.703037561203843 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + {[CP]|[EA]}P{I|L} 1.6918 + + 184 + 1 1.866 46577.6 1.0 3074 3405 6479 DOHH2_400M_050219_2,6481 DOHH2_400M_050219_2,6481,AEPLPRNGDQW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6482 34.766 29.0 2598400.0 25 0 660730.0 + 45277 YSDKYGLGY 9 94 533.2479606977075 1064.481368462215 2 533.2481567263603 MULTI CID FTMS 0 0 0 6479 1734034.625 0.07243429100359 -1 0.1152572631835937 3 Unmodified _YSDKYGLGY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 47.594388314883695 0.0456443387682827 2 [YG][VS]SG{I|L}YGY 10 5 + 65.059 0.0 0.0 6.1118 6.1118 77.476 0.0 0.0 0.0 0.9134139033098024 15.026975159433531 0.9134139033098024 0.9134139033098024 0 1.3494850021680094 1.3979400086720375 1.1421590589602533 0.0 [YG][VS]SG{I|L}YGY;{[QD]|[EN]|[WG]|[KD]|[RS]}SYG{I|L}YGY;{[QD]|[EN]|[WG]|[KD]|[RS]}YSG{I|L}YGY;[YG]{I|L}KDSYGY;YSDK[PS]GS[QP];[YG][VS]SG{I|L}GYY;YSDK[HT]{I|L}{[DS]|[MA]|[CV]|TT};{[QD]|[EN]|[WG]|[KD]|[RS]}SYG{I|L}GYY;{[QD]|[EN]|[WG]|[KD]|[RS]}YSG{I|L}GYY;{[{M(Oxidation (M))|F}C]|[YS]}[VG]SG{I|L}YGY 6.1118;6.026;6.026;5.9573;5.8496;5.7128;5.6804;5.627;5.627;5.614 -;-;-;-;-;-;-;-;-;- 2160 1 1.866 61544.0 1.0 3075 3405 6479 DOHH2_400M_050219_2,6482 DOHH2_400M_050219_2,6482,YSDKYGLGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6483 34.769 146.0 347570.0 25 0 35136.0 + -1 YLFEDMVQY 9 95 612.2695708609551 1222.5245887887102 2 612.2628661990166 MULTI CID FTMS 0 0 0 -1 0 4 Oxidation (M) _YLFEDM(Oxidation (M))VQY_ REV__ENSG00000114841|ENST00000420323|DNAH1;REV__ENST00000486752.5_1_3:52350520-52422757:+|nuORF;REV__ENST00000497875.1_1_3:52356446-52387784:+|nuORF;REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1;REV__nc|ENSG00000114841|Q9P2D7-6|DNAH1;REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1 25.399314129420983 0.2080152500878129 2 Y{I|L}D{M(Oxidation (M))|F}S{I|L}PAS 9 -1 69.976 0.0 0.0 5.7239 0.0 0.0 0.0 226.04709802799064 226.04709802799064 51.26464070433734 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.0 0.0 Y{I|L}D{M(Oxidation (M))|F}S{I|L}PAS 5.7239 - 1324 + 1 1.866 42259.6 1.0 3076 3405 6479 DOHH2_400M_050219_2,6483 DOHH2_400M_050219_2,6483,YLFEDMVQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6484 34.773 234.0 520480.0 25 0 32296.0 -1 0 85 910.9155704039888 1819.8165878747773 2 910.917041003704 MULTI CID FTMS 0 0 0 6479 373147.625 0.9063333909940972 -1 0.1152572631835937 5 2 [NP]{I|L}N[HM]REEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 78.738 0.0 0.0 4.3267 4.3267 79.204 0.0 0.0 0.0 4.122758320274642 59.045700912310224 4.122758320274642 9.030899869919438 0 1.424742501084005 0.0 0.805462187404089 1.5044321917401078 [NP]{I|L}N[HM]REEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG[HM]REEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM][VG]EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM]REEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM]REEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}{[QG]|[NA]}REEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM]REEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N[HM]RQ{[QD]|[EN]|[WG]|[KD]|[RS]}NNP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM]RQ{[QD]|[EN]|[WG]|[KD]|[RS]}PMP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.3267;3.8305;3.8305;3.8305;3.8305;3.2529;3.2504;2.7444;2.4293;1.8384 -;-;-;-;-;-;-;-;-;- 463 1 1.866 87135.0 1.0 3077 3405 6479 DOHH2_400M_050219_2,6484 DOHH2_400M_050219_2,6484, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6485 34.776 130.0 679100.0 25 0 76105.0 + 40537 VLDKDDRRLLSY 12 63 498.27537982942 1491.80431008846 3 498.2756225466728 MULTI CID FTMS 0 0 0 6479 351581.28125 0.4590208486332109 -1 0.1152572631835937 6 Unmodified _VIWWQRVYVFP_ nc|ENSG00000087269|P78316-2|NOP14;ENSG00000087269|ENST00000416614|NOP14 10.315234532428624 0.8205777915985574 2 V{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]}DR 7 8 69.653 0.0 0.0 4.669 0.0 0.0 0.0 647.3524874322874 647.3524874322874 53.45516025450024 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.805462187404089 V{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]}DR 4.669 - 75 + 1 1.866 72971.9 1.0 3078 3405 6479 DOHH2_400M_050219_2,6485 DOHH2_400M_050219_2,6485,VIWWQRVYVFP False False VLDKDDRRLLSY 34.775904 498.275622546673 4864869.40625 6479.0 nc|ENSG00000087269|P78316-2|NOP14;;ENSG00000087269|ENST00000416614|NOP14 8.711228847503662 3.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6486 34.779 184.0 706070.0 25 0 67546.0 -1 QNCRSMDRFSF 11 113 732.3127535720795 1462.6109542109589 2 732.3123657107353 MULTI CID FTMS 0 0 0 6479 296346.625 0.1316852200820137 -1 0.1152572631835937 7 Carbamidomethyl (C),Oxidation (M) _QNC(Carbamidomethyl (C))RSM(Oxidation (M))DRFSF_ ENSG00000197892|ENST00000524189|KIF13B 8.745405648335112 0.8338865417133445 2 [AG]NAQ[HD]QQNA{M(Oxidation (M))|F}Y 13 -1 + 86.763 0.0 0.0 5.9321 5.9321 79.1 0.0 0.0 0.0 2.730012720637376 11.448658907276354 2.730012720637376 2.730012720637376 0 1.218765315847925 1.5228787452803376 0.7302046884880937 1.9361818737241727 [AG]NAQ[HD]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQ[HD]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQ[HD]QQNA{M(Oxidation (M))|F}Y;[AG]GGAQ[HD]QQNA{M(Oxidation (M))|F}Y;[AG]NA[AG][HD]QQNA{M(Oxidation (M))|F}Y;[AG]NAQ[HD][AG]QNA{M(Oxidation (M))|F}Y;[AG]NAQ[HD]QQGGA{M(Oxidation (M))|F}Y;[AG]NAQ[HD]Q[AG]NA{M(Oxidation (M))|F}Y;[AG]GQQ[HD]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQ[HD][AG]QNA{M(Oxidation (M))|F}Y 5.9321;5.7454;5.4475;5.3733;5.3118;5.3118;5.3118;5.3118;5.1777;5.1251 -;-;-;-;-;-;-;-;-;- 2467 1 1.866 93825.1 1.0 3079 3405 6479 DOHH2_400M_050219_2,6486 DOHH2_400M_050219_2,6486,QNCRSMDRFSF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6487 34.783 179.0 369300.0 25 0 33535.0 + 38634 TTIKAFFPKK 10 108 394.2411698916841 1179.7016802752523 3 394.2414733767509 MULTI CID FTMS 0 0 0 6479 242109.0625 0.0203974998285528 4 -0.5013542175292969 8 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 26.268140514670165 0.3785003716575977 2 TT{I|L}KY{I|L}WKK 9 4 + 82.846 0.0 0.0 7.0226 7.0226 91.591 0.0 0.0 0.0 62.72283485483939 16.343567942833488 16.343567942833488 9.354089466986323 0 0.3807196863200844 1.5228787452803376 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK;TT{I|L}KY{I|L}{[NV]|[RG]}TK 7.0226;6.2297 -;- 154 + 1 1.866 59074.6 1.0 3080 3405 6479 DOHH2_400M_050219_2,6487 DOHH2_400M_050219_2,6487,TTIKAFFPKK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6488 34.785 110.0 998100.0 25 0 115290.0 + 43973 YIDDRGFRY 9 91 402.1963092042759 1203.5670982130275 3 402.1960021853447 MULTI CID FTMS 0 0 0 6479 198355.6875 0.0780086699814648 -1 0.1152572631835937 9 Unmodified _YIDDRGFRY_ ENSG00000149418|ENST00000278742|ST14 15.738622578938676 0.4106572216562794 2 Y{I|L}DDR 5 4 55.745 0.0 0.0 4.6317 0.0 0.0 0.0 538.2422422224317 538.2422422224317 42.981187280073065 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3807196863200844 + Y{I|L}DDR 4.6317 + + 79 + 1 1.866 91140.4 1.0 3081 3405 6479 DOHH2_400M_050219_2,6488 DOHH2_400M_050219_2,6488,YIDDRGFRY False True YIDDRGFRY 34.785252 402.196002185345 16720623.0 6479.0 ENSG00000149418|ENST00000278742|ST14 5.620320796966553 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6489 34.79 246.0 369030.0 25 0 36981.0 + 15318 IPLKPSNEL 9 116 505.797554740327 1009.580556547454 2 505.7980224490166 MULTI CID FTMS 0 0 0 6479 189318.984375 0.5140873611394324 -1 0.1152572631835937 10 Unmodified _IPLKPSNEL_ ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2 36.12702656103203 0.0967173616627612 2 {I|L}P{I|L}KA 5 5 58.232 0.0 0.0 5.7679 0.0 0.0 0.0 484.2129305475219 484.2129305475219 42.74735947860492 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 {I|L}P{I|L}KA 5.7679 - 463 + 1 1.866 73484.7 1.0 3082 3405 6479 DOHH2_400M_050219_2,6489 DOHH2_400M_050219_2,6489,IPLKPSNEL True True IPLKPSNEL 34.789827 505.798022449017 2884302.5 6479.0 nc|ENSG00000136108|Q8WWK9-4|CKAP2;;nc|ENSG00000136108|Q8WWK9-6|CKAP2;;ENSG00000136108|ENST00000258607|CKAP2;;nc|ENSG00000136108|Q8WWK9|CKAP2 4.556174834569295 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6490 34.797 430.0 200660.0 25 0 13812.0 + 32978 SEMNTDKQYF 10 130 631.7711111990089 1261.5276694648178 2 631.7711669802666 MULTI CID FTMS 0 0 0 6479 179894.703125 1.0 0 0.0 11 Unmodified _SEMNTDKQYF_ ENSG00000169251|ENST00000351193|NMD3;ENST00000439704.1_1_7:63369621-63370485:-|nuORF 65.47368725323818 0.0222277162070287 2 {[ES]|[DT]|[{I|L}C]}MN[KQ]{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F} 10 4 + 45.918 0.0 0.0 3.6399 3.6399 73.445 0.0 0.0 0.0 6.944057067367616 27.522610212647336 6.944057067367616 5.064987362915829 0 2.024227503252014 0.0 0.7942945886742239 0.3807196863200844 {[ES]|[DT]|[{I|L}C]}MN[KQ]{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}KQNM{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}KNQM{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}MNTD[KQ]Y{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}MN{[ES]|[DT]|[{I|L}C]}[KQ]Y{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}MN{[ES]|[DT]|[{I|L}C]}[KQ]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}KQGGM{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}K[AG]NM{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}KN[AG]M{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}KGGQM{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F} 3.6399;3.2384;3.1393;2.9174;2.7483;2.5725;2.5119;2.5119;2.4129;2.4129 -;-;-;+;+;-;-;-;-;- + 803 1 1.866 70680.9 1.0 3083 3405 6479 DOHH2_400M_050219_2,6490 DOHH2_400M_050219_2,6490,SEMNTDKQYF True True SEMNTDKQYF 34.797496 631.771166980267 817314.25 6479.0 ENSG00000169251|ENST00000351193|NMD3;;ENST00000439704.1_1_7:63369621-63370485:-|nuORF 7.386897087097168 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6491 34.805 430.0 337950.0 25 0 20733.0 -1 PEYENFRHLLQ 11 142 744.3651816358705 1486.715810338541 2 744.3663818240166 MULTI CID FTMS 0 0 0 6479 179062.203125 0.7199351504459648 -1 0.1152572631835937 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PEYENFRHLLQ_ ENSG00000100934|ENST00000307712|SEC23A;ENST00000554615.1_1_14:39509818-39510055:-|nuORF;nc|ENSG00000100934|Q15436-2|SEC23A 24.99096001346401 0.505407273373304 2 [NP]{I|L}NAD[WY]N[RP]K 12 -1 + 91.366 0.0 0.0 6.1455 6.1455 81.202 0.0 0.0 0.0 5.815111816407779 23.66460270953162 5.815111816407779 3.663958146833892 0 2.274227503252014 1.5228787452803376 0.0 1.531234684152075 [NP]{I|L}NAD[WY]N[RP]K;[NP]{I|L}NA[QP]Q{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NAD[WY]R[NP]Q;[NP]{I|L}NA[CS]{I|L}[NP]G{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NA[QP]{[C(Carbamidomethyl (C))E]|[WC]}G{M(Oxidation (M))|F}{I|L}Q;PN{I|L}NADQRR{[MS]|[{M(Oxidation (M))|F}A]}W;[NP]{I|L}NA[CS]{I|L}[HM]{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NA[QP][WC(Carbamidomethyl (C))]{M(Oxidation (M))|F}{I|L}Q;PN{I|L}NWQ[QP]APV[HS];PN{I|L}NADQ[QP]APV[HS] 6.1455;5.899;5.5342;5.4046;5.3422;5.2217;5.1766;5.1159;5.0882;5.0485 -;-;-;-;-;-;-;-;-;- 6696 1 1.866 105844.9 1.0 3084 3405 6479 DOHH2_400M_050219_2,6491 DOHH2_400M_050219_2,6491,PEYENFRHLLQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6492 34.811 340.0 440400.0 25 0 25593.0 + 30581 RESDQLFKQY 10 113 657.328307751049 1312.642062568898 2 657.3287841677666 MULTI CID FTMS 0 0 0 6479 172116.5625 0.5534162821886175 -1 0.1152572631835937 13 Unmodified _RESDQLFKQY_ ENSG00000168234|ENST00000317571|TTC39C;ENST00000578150.1_1_18:21594913-21660647:+|nuORF;nc|ENSG00000168234|Q8N584-3|TTC39C 57.24910588100465 0.0438022649904578 2 {[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}{M(Oxidation (M))|F}KQY 10 3 + 80.461 0.0 0.0 6.1297 6.1297 83.278 0.0 0.0 0.0 5.017302660547557 43.51869821044557 5.017302660547557 5.859982566642799 0 1.579689690656103 0.0 0.5891368308784531 1.0356668758921828 {[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}{M(Oxidation (M))|F}KQY;[DP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{I|L}{M(Oxidation (M))|F}KQY;{[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}{M(Oxidation (M))|F}K[AG]Y;{[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]{I|L}{M(Oxidation (M))|F}KQY;[TA][WE]Q{I|L}{M(Oxidation (M))|F}KQY;{[CP]|[EA]}{[WT]|[RM]}Q{I|L}{M(Oxidation (M))|F}KQY;[DP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{I|L}{M(Oxidation (M))|F}K[AG]Y;[DP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[AG]{I|L}{M(Oxidation (M))|F}KQY;[DP]PK[YQ]{M(Oxidation (M))|F}KQY;[DP]PK{M(Oxidation (M))|F}[SG]{M(Oxidation (M))|F}KQY 6.1297;5.6833;5.4315;5.4315;5.1823;5.1559;4.9851;4.9851;4.8578;4.8058 -;-;-;-;-;-;-;-;-;- 1170 1 1.866 114040.6 1.0 3085 3405 6479 DOHH2_400M_050219_2,6492 DOHH2_400M_050219_2,6492,RESDQLFKQY True True RESDQLFKQY 34.81134 657.328784167767 3465493.375 6479.0 ENSG00000168234|ENST00000317571|TTC39C;;ENST00000578150.1_1_18:21594913-21660647:+|nuORF;;nc|ENSG00000168234|Q8N584-3|TTC39C 6.070792992909749 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6493 34.82 464.0 289640.0 25 0 58308.0 + 30584 RESPNITDRW 10 111 637.3170602287836 1272.619567524367 2 637.3165161013603 MULTI CID FTMS 0 0 0 6479 165694.0625 1.0 0 0.0 14 Unmodified _RESPNITDRW_ ENSG00000196305|ENST00000443024|IARS1;ENST00000472894.1_1_9:95018893-95021273:-|nuORF 15.738622578938676 0.5834632108994704 2 VTEES{I|L} 6 9 42.115 0.0 0.0 3.3094 0.0 0.0 0.0 611.2610567682249 611.2610567682249 5.856383967376431 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 VTEES{I|L} 3.3094 - 467 + 1 1.866 101389.4 1.0 3086 3405 6479 DOHH2_400M_050219_2,6493 DOHH2_400M_050219_2,6493,RESPNITDRW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6494 34.835 800.0 310290.0 25 0 12269.0 + 26411 NTDPSIVMTY 10 202 578.7630826310412 1155.5116123288824 2 578.7630493044853 MULTI CID FTMS 0 0 0 6479 144854.4375 0.277594993813412 -1 0.1152572631835937 15 Oxidation (M) _NTDPSIVM(Oxidation (M))TY_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF 145.12958885780327 8.087004918445893e-05 2 {[QS]|[NT]}DPTVV{M(Oxidation (M))|F}TY 10 2 + 75.13 0.0 0.0 6.5019 6.5019 86.935 0.0 0.0 0.0 23.03604984823935 40.675325314361366 23.03604984823935 8.095636017648602 0 1.579689690656103 1.5228787452803376 1.8169015600442573 1.298455006504028 {[QS]|[NT]}DPTVV{M(Oxidation (M))|F}TY;{[QS]|[NT]}DV[TP]V{M(Oxidation (M))|F}TY;[AG]SDPTVV{M(Oxidation (M))|F}TY;{[ES]|[DT]|[{I|L}C]}NPTVV{M(Oxidation (M))|F}TY;[PS]{I|L}D{[QS]|[NT]}V{M(Oxidation (M))|F}TY;[PS]{I|L}VD{[QS]|[NT]}{M(Oxidation (M))|F}TY;[YT]YTVV{M(Oxidation (M))|F}TY;[PS]{I|L}DV{[QS]|[NT]}{M(Oxidation (M))|F}TY;[PS]DQTVV{M(Oxidation (M))|F}TY;[YT]{[TV]|[{I|L}S]}YV{M(Oxidation (M))|F}TY 6.5019;5.8013;4.1083;3.9256;3.8152;3.7451;3.743;3.5557;3.4869;3.4393 -;-;-;-;-;-;-;-;-;- 1602 1 1.866 181890.8 0.6700000166893005 3087 3405 6479 DOHH2_400M_050219_2,6494 DOHH2_400M_050219_2,6494,NTDPSIVMTY True False NTDPSIVMTY 34.834596 578.763049304485 3210137.75 6479.0 ENST00000426186.1_3_2:87098444-87121919:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 8.175917943318685 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6495 34.837 135.0 315400.0 25 0 26539.0 45344 YSPENDSIY 9 90 544.2335701286856 0 544.2318603396416 PEAK CID FTMS 0 0 0 6479 145917.03125 0.8698371555650934 -1 0.1152572631835937 16 Unmodified _YSPENDSIY_ ENSG00000107186|ENST00000319217|MPDZ;ENST00000539508.5_1_9:13136054-13190160:-|nuORF;nc|ENSG00000107186|O75970-2|MPDZ;nc|ENSG00000107186|O75970-3|MPDZ;nc|ENSG00000107186|O75970-5|MPDZ 10.073929032068715 0.3114232490637051 2 D 1 8 6.9897 0.0 0.0 0.64335 0.0 0.0 363.1167199937505 605.2776583307249 968.3943783244754 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.64335 + + 29 + 1 1.866 39059.4 1.0 3088 3405 6479 DOHH2_400M_050219_2,6495 DOHH2_400M_050219_2,6495,YSPENDSIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6496 34.84 131.0 312620.0 25 0 33697.0 + 30582 RESDQLFKQY 10 68 438.5551395349145 0 438.5554687380791 PEAK CID FTMS 0 0 0 6479 119576.2578125 0.4906714231270715 -1 0.1152572631835937 17 Unmodified _RESDQLFKQY_ ENSG00000168234|ENST00000317571|TTC39C;ENST00000578150.1_1_18:21594913-21660647:+|nuORF;nc|ENSG00000168234|Q8N584-3|TTC39C 34.93206674587334 0.1646816839352262 2 QD 2 9 13.271 0.0 0.0 1.5165 0.0 0.0 259.83475899293506 369.1531771295532 628.9879361224882 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 QD 1.5165 - 50 + 1 1.866 40236.1 1.0 3089 3405 6479 DOHH2_400M_050219_2,6496 DOHH2_400M_050219_2,6496,RESDQLFKQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6497 34.854 800.0 159850.0 25 0 13570.0 + 520 AEHLGEMNRQW 11 122 685.8168404152959 1369.6191278973918 2 685.8164550662041 MULTI CID FTMS 0 0 0 6479 105126.0859375 1.0 0 0.0 18 Unmodified _AEHLGEMNRQW_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 46.0223103267499 0.1396584557920269 2 [H{I|L}][HT]NMEG{I|L}H 10 9 58.606 0.0 0.0 4.279 0.0 0.0 0.0 197.05851653249505 197.05851653249505 44.00158309413092 0.0 0.0 0.0 0 1.7887254899964358 1.6989700043360187 0.2302046884880938 0.0 [H{I|L}][HT]NMEG{I|L}H 4.279 - 1697 1 1.866 95710.9 0.550000011920929 3090 3405 6479 DOHH2_400M_050219_2,6497 DOHH2_400M_050219_2,6497,AEHLGEMNRQW False True AEHLGEMNRQW 34.853835 685.816455066204 341998.3125 6479.0 ENST00000394768.6_2_14:64542710-64692241:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2;;nc|ENSG00000054654|Q8WXH0-7|SYNE2 7.4469038645426435 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6498 34.863 431.0 188740.0 25 0 9636.9 + 25567 NEVYEAVKNY 10 121 614.7959877298333 0 614.7958862185478 PEAK CID FTMS 0 0 0 6479 103061.4609375 1.0 0 0.0 19 Unmodified _NEVYEAVKNY_ ENSG00000163939|ENST00000707071|PBRM1;ENST00000480064.1_1_3:52643285-52649409:-|nuORF;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 59.36838082759317 0.0249210186886694 2 VYEAVKN 7 3 33.357 0.0 0.0 2.7173 0.0 0.0 243.09055836806647 178.05103479556877 421.1415931636353 0.0 0.0 0.0 0.0 0 1.0 0.0 0.5 0.6989700043360187 + VYEAVKN 2.7173 + + 242 + 1 1.866 65021.5 1.0 3091 3405 6479 DOHH2_400M_050219_2,6498 DOHH2_400M_050219_2,6498,NEVYEAVKNY True True NEVYEAVKNY 34.862687 614.795886218548 460864.21875 6479.0 nc|ENSG00000163939|Q86U86-7|PBRM1;;ENSG00000163939|ENST00000707071|PBRM1;;nc|ENSG00000163939|Q86U86-8|PBRM1;;nc|ENSG00000163939|Q86U86-4|PBRM1;;ENST00000480064.1_1_3:52643285-52649409:-|nuORF;;nc|ENSG00000163939|Q86U86-5|PBRM1;;nc|ENSG00000163939|Q86U86|PBRM1;;nc|ENSG00000163939|Q86U86-2|PBRM1;;nc|ENSG00000163939|Q86U86-3|PBRM1;;nc|ENSG00000163939|Q86U86-6|PBRM1;;nc|ENSG00000163939|Q86U86-9|PBRM1 6.013526280721028 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6499 34.87 439.0 185140.0 25 0 8804.9 + 30585 RESPNITDRW 10 112 425.2145579010891 0 425.2142516970634 PEAK CID FTMS 0 0 0 6479 95213.8515625 1.0 0 0.0 20 Unmodified _RESPNITDRW_ ENSG00000196305|ENST00000443024|IARS1;ENST00000472894.1_1_9:95018893-95021273:-|nuORF 20.580933911654288 0.2935917702031351 2 {I|L}T 2 8 6.4537 0.0 0.0 0.76067 0.0 0.0 159.06551609339073 472.1954900320826 631.2610061254734 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}T 0.76067 + + 20 + 1 1.866 71051.1 1.0 3092 3405 6479 DOHH2_400M_050219_2,6499 DOHH2_400M_050219_2,6499,RESPNITDRW False True RESPNITDRW 34.870485 425.214251697063 2946187.625 6479.0 ENSG00000196305|ENST00000443024|IARS1;;ENST00000472894.1_1_9:95018893-95021273:-|nuORF 5.049399693806966 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6501 34.876 90.0 450330.0 25 0 39765.0 + 20847 LMDSLLVPQ 9 67 508.2776279697644 1014.5407030063288 2 508.7800170779228 MULTI CID FTMS 0 0 0 6500 392921.34375 0.5265443892156394 6 -0.6052513122558594 1 Unmodified _LMDSLLVPQ_ REV__nc|ENSG00000146373|Q8TC41-2|RNF217 7.910154910731844 0.6385446671287552 2 GTPQ 4 -1 31.938 0.0 0.0 3.148 0.0 0.0 613.3560047834 0.0 613.3560047834 0.0 18.83925646871916 0.0 0.0 0 0.0 0.0 0.0 0.0 GTPQ 3.148 - 21 1 1.862 41135.0 1.0 3093 3406 6500 DOHH2_400M_050219_2,6501 DOHH2_400M_050219_2,6501,LMDSLLVPQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6502 34.884 423.0 174520.0 25 0 12340.0 + 359 AECYMNHRFY 10 106 667.2761768702405 1332.537800807281 2 667.2773315310478 MULTI CID FTMS 0 0 0 6500 26241.25 0.0438599240259954 3 -0.388336181640625 2 Unmodified _AECYMNHRFY_ REV__ENSG00000148985|ENST00000278243|PGAP2;REV__ENST00000490830.5_1_11:3845682-3846685:+|nuORF;REV__nc|ENSG00000148985|Q9UHJ9-3|PGAP2;REV__nc|ENSG00000148985|Q9UHJ9-5|PGAP2;REV__nc|ENSG00000148985|Q9UHJ9|PGAP2 10.073929032068715 0.6785112666868882 2 {[CP]|[EA]}{I|L}HVNNEN{I|L} 10 -1 58.889 0.0 0.0 4.4193 0.0 0.0 0.0 195.9683978026293 195.9683978026293 26.34257515626636 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 {[CP]|[EA]}{I|L}HVNNEN{I|L} 4.4193 - 1243 1 1.862 59833.3 1.0 3094 3406 6500 DOHH2_400M_050219_2,6502 DOHH2_400M_050219_2,6502,AECYMNHRFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6503 34.885 71.0 1400600.0 25 0 276410.0 + 43975 YIDDRGFRY 9 63 602.7908005591316 1203.5670481850632 2 602.7910644412041 MULTI CID FTMS 0 0 0 6500 850438.4375 1.0 0 0.0 3 Unmodified _YIDDRGFRY_ ENSG00000149418|ENST00000278742|ST14 21.59015148037692 0.2564810811560323 2 Y{I|L}DDRYE 7 4 63.32 0.0 0.0 5.261 0.0 0.0 0.0 246.1334017389281 246.1334017389281 45.61706352137996 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.4247425010840047 0.7614393726401688 Y{I|L}DDRYE 5.261 - 89 + 1 1.862 76097.0 1.0 3095 3406 6500 DOHH2_400M_050219_2,6503 DOHH2_400M_050219_2,6503,YIDDRGFRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6504 34.891 299.0 269830.0 25 0 27518.0 + 6851 EEDYRTLTNY 10 119 652.2938870760289 1302.5732212188575 2 652.2938110232353 MULTI CID FTMS 0 0 0 6500 296230.0625 1.0 0 0.0 4 Unmodified _EEDYRTLTNY_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 96.93554129104106 0.0088365951652222 2 {[YD]|[{M(Oxidation (M))|F}M]}TK{[QN]|[E{I|L}]|[KN]}EENY 10 7 + 51.723 0.0 0.0 3.9709 3.9709 78.631 0.0 0.0 0.0 2.6227968600336737 11.09366274865181 2.6227968600336737 9.164539485499256 0 0.8494850021680094 0.0 1.8169015600442573 0.4247425010840047 {[YD]|[{M(Oxidation (M))|F}M]}TK{[QN]|[E{I|L}]|[KN]}EENY;{[YD]|[{M(Oxidation (M))|F}M]}TK{[QN]|[E{I|L}]|[KN]}EEGGY;{[ES]|[DT]|[{I|L}C]}YK{[QN]|[E{I|L}]|[KN]}EENY;{[YD]|[{M(Oxidation (M))|F}M]}TK[HC]{I|L}{M(Oxidation (M))|F}NY;{[YD]|[{M(Oxidation (M))|F}M]}TK{[QN]|[E{I|L}]|[KN]}DPC(Carbamidomethyl (C))Y;{[YD]|[{M(Oxidation (M))|F}M]}TK{[{M(Oxidation (M))|F}C]|[YS]}[H{I|L}]NY;{[ES]|[DT]|[{I|L}C]}YK{[QN]|[E{I|L}]|[KN]}EEGGY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM}{[VA]|[{I|L}G]}T{I|L}TNY;{[YD]|[{M(Oxidation (M))|F}M]}TK[HC]{I|L}{M(Oxidation (M))|F}GGY;{[YD]|[{M(Oxidation (M))|F}M]}TK[HC]{I|L}N{M(Oxidation (M))|F}Y 3.9709;3.2673;2.8545;2.8467;2.3713;2.2357;2.151;2.1475;2.1431;1.9502 -;-;-;-;-;-;-;-;-;- 637 1 1.862 65895.2 1.0 3096 3406 6500 DOHH2_400M_050219_2,6504 DOHH2_400M_050219_2,6504,EEDYRTLTNY True True EEDYRTLTNY 34.890823 652.293811023235 1600990.375 6500.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 8.885529359181723 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6505 34.905 800.0 230890.0 25 0 15972.0 38520 TSPPEVSGYSY 11 179 593.7671459168151 1185.5197389004302 2 593.7666503787041 MULTI CID FTMS 0 0 0 6500 230681.328125 1.0 0 0.0 5 Unmodified _TSPPEVSGYSY_ ENSG00000131711|ENST00000296755|MAP1B 29.081581746732265 0.4093582134107448 2 [DP]ES{M(Oxidation (M))|F}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AY 10 9 + 74.517 0.0 0.0 6.2856 6.2856 76.85 0.0 0.0 0.0 0.2112365956140536 16.53212513775344 0.2112365956140536 0.2112365956140536 0 2.9247425010840047 0.0 2.484636880228201 0.0 [DP]ES{M(Oxidation (M))|F}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AY;[H{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{M(Oxidation (M))|F}SC(Carbamidomethyl (C))Y;[H{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{M(Oxidation (M))|F}S[CG]Y;[DP]ES{[ET]|[MV]}K{M(Oxidation (M))|F}AY;[H{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T[YC(Carbamidomethyl (C))]AY;[QP]{[{M(Oxidation (M))|F}H]|[RQ]}T{M(Oxidation (M))|F}SC(Carbamidomethyl (C))Y;[KT]{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}SC(Carbamidomethyl (C))Y;{[MG]|[TS]}[HC]{M(Oxidation (M))|F}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AY;[DP]E[R{I|L}]{M(Oxidation (M))|F}SC(Carbamidomethyl (C))Y;[KT]E{[C(Carbamidomethyl (C))G]|[NC]}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AY 6.2856;6.2678;5.491;5.0261;5.024;4.6093;4.5836;4.5695;4.5451;4.474 -;-;-;-;-;-;-;-;-;- 8027 1 1.862 135679.3 0.8899999856948853 3097 3406 6500 DOHH2_400M_050219_2,6505 DOHH2_400M_050219_2,6505,TSPPEVSGYSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6506 34.912 414.0 247750.0 25 0 21148.0 + 38608 TTEESLRNYY 10 112 638.2951891706027 0 638.2946044802666 PEAK CID FTMS 0 0 0 6500 225108.765625 1.0 0 0.0 6 Unmodified _TTEESLRNYY_ ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1 70.33199760932243 0.0082966805468078 2 TEES{I|L}[RN]NE 9 3 43.624 0.0 0.0 3.4227 0.0 0.0 101.05258429648036 98.02533899478748 199.07792329126784 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 1.0228787452803376 0.3252574989159953 TEES{I|L}[RN]NE 3.4227 - 294 + 1 1.862 80594.1 1.0 3098 3406 6500 DOHH2_400M_050219_2,6506 DOHH2_400M_050219_2,6506,TTEESLRNYY True True TTEESLRNYY 34.912054 638.294604480267 645829.6875 6500.0 ENSG00000122566|ENST00000618183|HNRNPA2B1;;nc|ENSG00000122566|P22626|HNRNPA2B1;;ENST00000463181.5_1_7:26232138-26237376:-|nuORF 8.07443650563558 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6507 34.919 398.0 220980.0 25 0 14778.0 + -1 NRCHKENRFLQ 11 94 751.3736125764573 1500.7326722197145 2 751.3738891482353 MULTI CID FTMS 0 0 0 6500 212859.125 1.0 0 0.0 7 Carbamidomethyl (C) _NRC(Carbamidomethyl (C))HKENRFLQ_ REV__ENSG00000130943|ENST00000253255|PKDREJ 13.614867670302877 0.751941774060705 2 PN{I|L}NEAQ 7 -1 76.931 0.0 0.0 5.1262 0.0 0.0 0.0 731.3502901666624 731.3502901666624 22.05359054771474 0.0 0.0 0.0 0 1.5 1.3979400086720375 0.0 0.3494850021680094 PN{I|L}NEAQ 5.1262 - 1048 + 1 1.862 67105.2 1.0 3099 3406 6500 DOHH2_400M_050219_2,6507 DOHH2_400M_050219_2,6507,NRCHKENRFLQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6508 34.926 387.0 323700.0 25 0 25720.0 + 572 AEINENNVREF 11 130 667.8208415816589 1333.6271302301177 2 667.8206054568291 MULTI CID FTMS 0 0 0 6500 175279.6875 0.4817366585282878 -1 0.1130180358886718 8 Unmodified _AEINENNVREF_ ENSG00000151332|ENST00000416007|MBIP;nc|ENSG00000151332|Q9NS73-2|MBIP;nc|ENSG00000151332|Q9NS73-3|MBIP;nc|ENSG00000151332|Q9NS73-5|MBIP 82.44511118730084 0.0058382126987246 2 {[CP]|[EA]}{I|L}NENNVRE{M(Oxidation (M))|F} 11 0 + 92.409 0.0 0.0 6.9292 6.9292 87.917 0.0 0.0 0.0 63.42481631581677 0.6709865612366173 0.6709865612366173 7.7815125038364386 0 2.309894379144197 0.0 0.8494850021680094 1.6237125054200234 + + {[CP]|[EA]}{I|L}NENNVRE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}NEEVVRE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}GGENNVRE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}NEGGNVRE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}NENGGVRE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}HVNNEVY{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AHVNNEVY{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}GGEEVVRE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AHVVEEVY{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}HVGGNEVY{M(Oxidation (M))|F} 6.9292;6.3457;6.2447;6.2447;6.2447;6.1113;6.0725;5.6612;5.489;5.4268 +;-;-;-;-;-;-;-;-;- + 1841 + 1 1.862 98838.0 1.0 3100 3406 6500 DOHH2_400M_050219_2,6508 DOHH2_400M_050219_2,6508,AEINENNVREF True True AEINENNVREF 34.926141 667.820605456829 2602539.5 6500.0 nc|ENSG00000151332|Q9NS73-2|MBIP;;nc|ENSG00000151332|Q9NS73-5|MBIP;;nc|ENSG00000151332|Q9NS73-3|MBIP;;ENSG00000151332|ENST00000416007|MBIP 8.651898384094238 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6509 34.94 800.0 135840.0 25 0 32144.0 -1 RLDWFRLQVMI 11 82 746.9101685799793 1491.8057842267583 2 746.9102050662041 MULTI CID FTMS 0 0 0 6500 153123.984375 1.0 0 0.0 9 Oxidation (M) _RLDWFRLQVM(Oxidation (M))I_ ENST00000549451.1_1_12:54912642-54912774:+|nuORF 1.0714618166137932 0.8700927088084459 2 YSED 4 -1 25.918 0.0 0.0 1.7373 0.0 0.0 427.3192279029445 567.2796114557249 994.5988393586696 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 YSED 1.7373 - 95 + 1 1.862 81097.2 0.7300000190734863 3101 3406 6500 DOHH2_400M_050219_2,6509 DOHH2_400M_050219_2,6509,RLDWFRLQVMI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6510 34.949 428.0 196290.0 25 0 25137.0 + 13100 HENDITHFY 9 116 588.2617178359012 1174.5088827386023 2 588.2595092654228 MULTI CID FTMS 0 0 0 6500 157490.125 1.0 0 0.0 10 Unmodified _HENDITHFY_ ENSG00000109685|ENST00000508803|NSD2;ENST00000353275.9_2_4:1944147-1980633:+|nuORF;nc|ENSG00000109685|O96028-2|NSD2;nc|ENSG00000109685|O96028-4|NSD2 61.60191391372663 0.0251951588191061 2 HE{[QD]|[EN]|[WG]|[KD]|[RS]}AEH{M(Oxidation (M))|F}Y 9 3 + 56.48 0.0 0.0 4.8088 4.8088 84.286 0.0 0.0 0.0 45.51084044734338 10.073930987251387 10.073930987251387 10.785851655746072 0 1.492992819099939 1.6989700043360187 0.0 0.0 HE{[QD]|[EN]|[WG]|[KD]|[RS]}AEH{M(Oxidation (M))|F}Y;HE{[QD]|[EN]|[WG]|[KD]|[RS]}AEHY{M(Oxidation (M))|F};Y{[{M(Oxidation (M))|F}H]|[RQ]}[YV]H{M(Oxidation (M))|F}Y;HWWAEH{M(Oxidation (M))|F}Y;H{M(Oxidation (M))|F}Y[YV]H{M(Oxidation (M))|F}Y;Y{[{M(Oxidation (M))|F}H]|[RQ]}[YV]HY{M(Oxidation (M))|F};{[YC]|[HE]}[DN]{I|L}T[QA]{M(Oxidation (M))|F}T;HWWAEHY{M(Oxidation (M))|F};H{M(Oxidation (M))|F}Y[YV]HY{M(Oxidation (M))|F};{[YC]|[HE]}[DN]{I|L}G{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}T 4.8088;3.8905;2.9678;2.8107;2.7684;2.0494;1.9625;1.8924;1.8501;0.83297 -;-;-;-;-;-;-;-;-;- 256 + 1 1.862 67381.8 1.0 3102 3406 6500 DOHH2_400M_050219_2,6510 DOHH2_400M_050219_2,6510,HENDITHFY True True HENDITHFY 34.948791 588.259509265423 451765.3125 6500.0 nc|ENSG00000109685|O96028-4|NSD2;;ENST00000353275.9_2_4:1944147-1980633:+|nuORF;;nc|ENSG00000109685|O96028-2|NSD2;;ENSG00000109685|ENST00000508803|NSD2 8.27116584777832 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6511 34.954 277.0 388430.0 25 0 28180.0 7144 EENFTTPCY 9 117 552.221767088805 0 552.2214843630791 PEAK CID FTMS 0 0 0 6500 154340.5625 1.0 0 0.0 11 Unmodified _EENFTTPCY_ ENSG00000182168|ENST00000453304|UNC5C 21.74664581756881 0.185237546287679 2 SDK 3 9 16.95 0.0 0.0 1.5376 0.0 0.0 163.06278651556755 606.1873262994749 769.2501128150425 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SDK 1.5376 - 82 + 1 1.862 84757.0 1.0 3103 3406 6500 DOHH2_400M_050219_2,6511 DOHH2_400M_050219_2,6511,EENFTTPCY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6512 34.963 512.0 186310.0 25 0 10642.0 + 7734 ELDPSNTKALY 11 128 625.8178630394461 1249.6211731456922 2 625.8168212771416 MULTI CID FTMS 0 0 0 6500 111396.40625 1.0 0 0.0 12 Unmodified _ELDPSNTKALY_ ENSG00000171497|ENST00000307720|PPID 55.23464941255904 0.0886405999673349 2 [PS]NTKA{I|L}DE{I|L}Y 11 6 + 70.174 0.0 0.0 5.6156 5.6156 76.555 0.0 0.0 0.0 1.7526085655186847 6.1535656654828585 1.7526085655186847 1.7526085655186847 0 0.7429928190999391 0.9208187539523752 1.7786596949921218 0.0 [PS]NTKA{I|L}DE{I|L}Y;{[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}A{I|L}DE{I|L}Y;{[QN]|[E{I|L}]|[KN]}DPSNT[KA]{I|L}Y;{[QN]|[E{I|L}]|[KN]}DPSTN[KA]{I|L}Y;[PS]GGTKA{I|L}DE{I|L}Y;[PS]NTKAD{I|L}E{I|L}Y;{[QN]|[E{I|L}]|[KN]}DPSK[Q{I|L}]{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}AD{I|L}E{I|L}Y;{[QN]|[E{I|L}]|[KN]}DPSGGT[KA]{I|L}Y;{[QN]|[E{I|L}]|[KN]}DPSTGG[KA]{I|L}Y 5.6156;5.4754;5.1232;4.9992;4.8851;4.6949;4.6818;4.5546;4.3927;4.2687 -;-;+;-;-;-;-;-;-;- + 1043 1 1.862 75978.0 1.0 3104 3406 6500 DOHH2_400M_050219_2,6512 DOHH2_400M_050219_2,6512,ELDPSNTKALY True True ELDPSNTKALY 34.962953 625.816821277142 1053668.875 6500.0 ENSG00000171497|ENST00000307720|PPID 7.431430339813232 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6513 34.977 800.0 106800.0 25 0 6609.2 + 36701 MGYGRSIAV 9 134 477.2495693390075 0 477.2478515505791 PEAK CID FTMS 0 0 0 6500 86489.734375 0.719702437410246 5 -0.5069313049316406 13 Unmodified _TDEKVKAY_ ENST00000296582.7_1_4:148546130-148549526:+|nuORF 9.347437153973935 0.5488964601725408 2 GYA 3 7 17.065 0.0 0.0 1.7916 0.0 0.0 131.04248727550174 527.2859591119749 658.3284463874766 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 GYA 1.7916 - 46 + 1 1.862 66919.1 0.4199999868869781 3105 3406 6500 DOHH2_400M_050219_2,6513 DOHH2_400M_050219_2,6513,TDEKVKAY False False MGYGRSIAV 34.976768 477.247851550579 565801.375 6500.0 ENST00000296582.7_1_4:148546130-148549526:+|nuORF 0.3212196429570516 2.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 6514 34.984 308.0 312140.0 25 0 14478.0 + -1 SELEKIQKF 9 135 561.3118160472051 560.304539580605 1 561.3125488162041 MULTI CID FTMS 0 0 0 6500 303501.6875 0.1505307636858083 -4 0.5046234130859375 14 ENSG00000172244|ENST00000306862|C5orf34 2 Y 1 -1 12.474 0.0 0.0 2.2263 0.0 0.0 379.2301967845097 0.0 379.2301967845097 0.0 0.1458087692222776 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.2263 - 143 + 1 1.862 74750.5 1.0 3106 3406 6500 DOHH2_400M_050219_2,6514 DOHH2_400M_050219_2,6514, False False SELEKIQKF 34.98358 561.312548816204 10957554.0 6500.0 ENSG00000172244|ENST00000306862|C5orf34 5.677226543426514 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6515 34.991 397.0 299800.0 25 0 44857.0 + 18946 LDCRPVSSV 9 130 488.2493554311122 0 488.2496826052666 PEAK CID FTMS 0 0 0 6500 130107.3984375 1.0 0 0.0 15 Unmodified _LDCRPVSSV_ REV__ENSG00000135063|ENST00000303068|ENTREP1;REV__nc|ENSG00000135063|Q15884|ENTREP1 21.74664581756881 0.185237546287679 2 S 1 -1 7.7776 0.0 0.0 0.79812 0.0 0.0 770.3724768760933 114.05653558902576 884.4290124651191 0.0 0.0 0.0 0.0 0 0.5 0.0 0.25 0.0 S 0.79812 + + 86 + 1 1.862 93442.5 1.0 3107 3406 6500 DOHH2_400M_050219_2,6515 DOHH2_400M_050219_2,6515,LDCRPVSSV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6516 35.005 800.0 118930.0 25 0 6897.6 + 8519 ETEESNLNMY 10 126 615.2533826043658 1228.4922122755315 2 615.2528564333916 MULTI CID FTMS 0 0 0 6500 121801.375 1.0 0 0.0 16 Unmodified _ETEESNLNMY_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000519124.5_1_8:124382257-124392860:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2 18.1463463914782 0.5430639438673815 2 [DP]EE 4 8 21.401 0.0 0.0 1.742 0.0 0.0 0.0 755.3027340863315 755.3027340863315 2.7287874528033704 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.5994850021680094 0.0 [DP]EE 1.742 - 384 1 1.862 74851.0 0.6399999856948853 3108 3406 6500 DOHH2_400M_050219_2,6516 DOHH2_400M_050219_2,6516,ETEESNLNMY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6517 35.006 77.0 882460.0 25 0 117830.0 + 20267 LLDQGQLNKY 10 86 596.3220610503188 1190.6295691674377 2 596.3212768435478 MULTI CID FTMS 0 0 0 6500 112923.0703125 0.137250810848013 -1 0.1130180358886718 17 Unmodified _LLDQGQLNKY_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 92.65332237495696 0.0091434457392194 2 {I|L}{I|L}DQ{[QG]|[NA]}{I|L}NKY 10 0 + 107.43 0.0 0.0 9.0228 9.0228 92.308 0.0 0.0 0.0 82.12434335926098 13.037275116073346 13.037275116073346 9.164539485499247 0 1.274227503252014 2.0 0.0 2.353917193908117 + + {I|L}{I|L}DQ{[QG]|[NA]}{I|L}NKY;{I|L}{I|L}DQ{[QG]|[NA]}{I|L}GGKY;{I|L}{I|L}D[AG]{[QG]|[NA]}{I|L}NKY;{I|L}{I|L}DQ{[QG]|[NA]}{I|L}[YK]N 9.0228;8.2531;8.2531;7.0949 +;-;-;- + 385 + 1 1.862 57121.5 1.0 3109 3406 6500 DOHH2_400M_050219_2,6517 DOHH2_400M_050219_2,6517,LLDQGQLNKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6518 35.017 558.0 194450.0 25 0 35487.0 -1 0 157 406.2215308596475 405.2142543930475 1 406.2249633669853 MULTI CID FTMS 0 0 0 6500 105849.203125 1.0 0 0.0 18 2 Y 1 -1 15.485 0.0 0.0 3.8213 0.0 0.0 224.1400184084756 0.0 224.1400184084756 0.0 7.032700902169777 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.8213 - 8 + 1 1.862 87502.0 1.0 3110 3406 6500 DOHH2_400M_050219_2,6518 DOHH2_400M_050219_2,6518, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6519 35.031 800.0 96019.0 25 0 50185.0 -1 0 43 1191.476611316204 0 1191.476611316204 PEAK CID FTMS 0 0 0 -1 0 19 2 YKN{I|L} 4 -1 15.433 0.0 0.0 0.64819 0.0 0.0 1208.3111805408082 651.3130587213499 1859.624239262158 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YKN{I|L} 0.64819 - 32 + 1 1.862 56563.5 0.3300000131130218 3111 3406 6500 DOHH2_400M_050219_2,6519 DOHH2_400M_050219_2,6519, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6520 35.045 800.0 280730.0 25 0 25330.0 -1 0 98 815.3871303279898 4071.899269306949 5 815.9907104372978 MULTI CID FTMS 0 0 0 6500 88640.484375 1.0 0 0.0 20 2 PGSGGP 6 -1 38.404 0.0 0.0 0.94315 0.0 0.0 1280.5899913307746 2336.0855853925345 3616.675576723309 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 PGSGGP 0.94315 - 1007 + 1 1.862 158521.8 0.4399999976158142 3112 3406 6500 DOHH2_400M_050219_2,6520 DOHH2_400M_050219_2,6520, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6522 35.05 3.5 15267000.0 25 0 4104200.0 + 45278 YSDKYGLGY 9 77 533.2479606977075 1064.481368462215 2 533.2487670779228 MULTI CID FTMS 0 0 0 6521 14422402.0 0.6024542119156123 1 -0.1092033386230468 1 Unmodified _YSDKYGLGY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 40.23920728925047 0.0741434193262949 2 [YG]{I|L}KSDYGY 9 5 + 59.607 0.0 0.0 5.5996 5.5996 75.925 0.0 0.0 0.0 7.149640954996954 14.973024840566469 7.149640954996954 1.2371250542002343 0 0.4247425010840047 1.3979400086720375 0.4247425010840047 0.0 [YG]{I|L}KSDYGY;[YG]{I|L}KSDGYY;YS{[YC]|[HE]}SK{I|L}{[DS]|[MA]|[CV]|TT};{[QD]|[EN]|[WG]|[KD]|[RS]}SYG{I|L}YGY;{[QD]|[EN]|[WG]|[KD]|[RS]}SYG{I|L}GYY;YSD[HT]K{I|L}{[DS]|[MA]|[CV]|TT};{[QD]|[EN]|[WG]|[KD]|[RS]}SYGY{I|L}GY;[YG]{I|L}K[DG]SYY;Y[HT]DSK{I|L}{[DS]|[MA]|[CV]|TT};Y[HT]{I|L}G[RD]{[CT]|[{M(Oxidation (M))|F}G]} 5.5996;5.4834;4.9279;4.8147;4.6985;4.6451;4.2731;3.4403;3.3732;2.9713 -;-;-;-;-;-;-;-;-;- 299 1 1.864 46482.6 1.0 3113 3407 6521 DOHH2_400M_050219_2,6522 DOHH2_400M_050219_2,6522,YSDKYGLGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6523 35.051 63.0 638220.0 25 0 51022.0 + 32900 SEINKPNFY 9 64 556.2745782313033 1110.5346035294065 2 556.2746459841728 MULTI CID FTMS 0 0 0 6521 530490.5 0.1843027204680435 1 -0.1092033386230468 2 Unmodified _SEINKPNFY_ ENSG00000067334|ENST00000436063|DNTTIP2 26.88365393820708 0.1891292719743517 2 {[ES]|[DT]|[{I|L}C]}{I|L}NK[NP]{M(Oxidation (M))|F}Y 9 0 + 34.09 0.0 0.0 3.0697 3.0697 77.628 0.0 0.0 0.0 19.397737521010832 9.12971259689116 9.12971259689116 9.208187539523756 0 0.4247425010840047 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}{I|L}NK[NP]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}GGK[NP]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}[EP]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}Y 3.0697;2.2406;1.2227 +;-;- + 60 + 1 1.864 37257.4 1.0 3114 3407 6521 DOHH2_400M_050219_2,6523 DOHH2_400M_050219_2,6523,SEINKPNFY False True SEINKPNFY 35.051276 556.274645984173 57659586.0 6521.0 ENSG00000067334|ENST00000436063|DNTTIP2 8.602147738138834 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6524 35.052 22.0 2409600.0 25 0 170230.0 43506 WWWWIWWQWW 10 61 874.9037639281709 1747.7929749231416 2 874.9061767458916 MULTI CID FTMS 0 0 0 6521 2329200.25 0.8954785871570038 -1 0.1747055053710937 3 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 2 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 8 47.268 0.0 0.0 2.7044 0.0 0.0 862.4318546802755 0.0 862.4318546802755 0.0 17.526782892599364 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.805462187404089 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.7044 - 155 1 1.864 41701.1 1.0 3115 3407 6521 DOHH2_400M_050219_2,6524 DOHH2_400M_050219_2,6524,WWWWIWWQWW False False False False splicing PXD020620_cell_line DOHH2_400M_050219_2 6525 35.054 32.0 2025200.0 25 0 198550.0 + -1 FKSQCHHYFAY 11 62 744.3302669433846 1486.645980953569 2 744.3315917849541 MULTI CID FTMS 0 0 0 6521 1511786.5 1.0 0 0.0 4 Carbamidomethyl (C) _FKSQC(Carbamidomethyl (C))HHYFAY_ REV__nc|ENSG00000118971|P30279-2|CCND2 5.731851221503515 0.8481046878870278 2 {[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y 12 -1 + 59.773 0.0 0.0 4.0207 4.0207 68.442 0.0 0.0 0.0 0.3476210625921183 10.316879883148111 0.3476210625921183 0.3476210625921183 0 0.8182503180159344 0.0 0.0 1.174742501084005 {[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[WQ]AQQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N[WQ]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQ[AG]NA{M(Oxidation (M))|F}Y 4.0207;3.9973;3.8019;3.7785;3.753;3.66;3.66;3.4157;3.4157;3.4087 -;-;-;-;-;-;-;-;-;- 975 1 1.864 52964.3 1.0 3116 3407 6521 DOHH2_400M_050219_2,6525 DOHH2_400M_050219_2,6525,FKSQCHHYFAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6526 35.055 42.0 1400100.0 25 0 171920.0 -1 QNCRSMDRFSF 11 63 732.3127535720795 1462.6109542109589 2 732.3133422732353 MULTI CID FTMS 0 0 0 6521 1200198.125 0.5333226056907016 1 -0.1092033386230468 5 Carbamidomethyl (C),Oxidation (M) _QNC(Carbamidomethyl (C))RSM(Oxidation (M))DRFSF_ ENSG00000197892|ENST00000524189|KIF13B 5.296884461304476 0.8501568894076437 2 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y 12 -1 + 68.848 0.0 0.0 4.7072 4.7072 76.407 0.0 0.0 0.0 4.39200851222833 11.382353118286233 4.39200851222833 4.39200851222833 0 0.8935078169319297 0.0 1.055462187404089 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}Y;[HS][PG]DEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;[HS][PG]DEAQQGGA{M(Oxidation (M))|F}Y 4.7072;4.4069;4.2221;4.0852;4.0852;4.0852;3.7866;3.7866;3.7866;3.6018 -;-;-;-;-;-;-;-;-;- 509 1 1.864 49879.8 1.0 3117 3407 6521 DOHH2_400M_050219_2,6526 DOHH2_400M_050219_2,6526,QNCRSMDRFSF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6527 35.056 45.0 1324300.0 25 0 134090.0 + 6987 EEIPKNYSI 9 77 546.7826353124138 1091.5507176916276 2 546.7824584841728 MULTI CID FTMS 0 0 0 6521 912072.6875 1.0 0 0.0 6 Unmodified _EEIPKNYSI_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 32.78568957990786 0.1150597335874693 2 EE{I|L}PK[YN]S{I|L} 9 0 + 45.111 0.0 0.0 4.1328 4.1328 81.376 0.0 0.0 0.0 17.728787452803374 6.923487412610356 6.923487412610356 9.987737688117228 0 0.5 1.6989700043360187 0.4247425010840047 0.0 + + EE{I|L}PK[YN]S{I|L};EE{I|L}P{[{M(Oxidation (M))|F}H]|[RQ]}[HA]{I|L};[KP]N{[{M(Oxidation (M))|F}H]|[RQ]}P{I|L}[HC];[KP]GG{[{M(Oxidation (M))|F}H]|[RQ]}P{I|L}[HC] 4.1328;3.2177;1.7501;0.90647 +;-;-;- + 139 + 1 1.864 49111.2 1.0 3118 3407 6521 DOHH2_400M_050219_2,6527 DOHH2_400M_050219_2,6527,EEIPKNYSI True True EEIPKNYSI 35.056094 546.782458484173 8124849.5 6521.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 5.516857147216797 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6528 35.058 73.0 702550.0 25 0 58100.0 + 39726 VEKGNLTVY 9 79 511.7809820489979 1021.5474111647958 2 511.7809936404228 MULTI CID FTMS 0 0 0 6521 609161.375 1.0 0 0.0 7 Unmodified _VEKGNLTVY_ REV__ENSG00000137760|ENST00000428149|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-2|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-3|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-4|ALKBH8 25.399314129420983 0.2080152500878129 2 D{I|L}K[RN][{I|L}T]Y 8 -1 + 45.864 0.0 0.0 4.4896 4.4896 84.677 0.0 0.0 0.0 16.923487412610356 4.436974992327123 4.436974992327123 17.501225267834 0 0.0 1.5228787452803376 0.0 0.0 D{I|L}K[RN][{I|L}T]Y;[VG][K{I|L}]{[ES]|[DT]|[{I|L}C]}QVY;[Q{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}QVY;[VG][K{I|L}]Q{[ES]|[DT]|[{I|L}C]}VY;[Q{I|L}]{M(Oxidation (M))|F}[KP]QVY;[Q{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[AG]VY;[Q{I|L}]{M(Oxidation (M))|F}[KP][AG]VY;[Q{I|L}][RN]{[ET]|[MV]}VY;[Q{I|L}][RK]{[ES]|[DT]|[{I|L}C]}VY 4.4896;2.7764;2.7054;2.0922;1.9437;1.7987;1.037;0.99098;0.89611 -;-;-;-;-;-;-;-;- 91 + 1 1.864 42233.1 1.0 3119 3407 6521 DOHH2_400M_050219_2,6528 DOHH2_400M_050219_2,6528,VEKGNLTVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6529 35.061 179.0 446500.0 25 0 33489.0 + 6928 EEFSRAAEKLY 11 78 671.8355349083404 1341.656516883481 2 671.8351318240166 MULTI CID FTMS 0 0 0 6521 313370.6875 0.6483599235897185 -1 0.1747055053710937 8 Unmodified _EEFSRAAEKLY_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 63.22749603027936 0.0560465731344335 2 EK{I|L}Y 4 7 62.735 0.0 0.0 4.6759 0.0 0.0 790.3593908315136 0.0 790.3593908315136 0.0 38.21456278567766 0.0 0.0 0 1.424742501084005 0.0 1.274227503252014 0.3807196863200844 + EK{I|L}Y 4.6759 + + 114 1 1.864 70919.5 1.0 3120 3407 6521 DOHH2_400M_050219_2,6529 DOHH2_400M_050219_2,6529,EEFSRAAEKLY True True EEFSRAAEKLY 35.06129 671.835131824017 4385151.375 6521.0 ENSG00000143742|ENST00000304786|SRP9;;nc|ENSG00000143742|P49458-2|SRP9 7.954355239868164 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6530 35.066 246.0 550680.0 25 0 48097.0 + 23361 LTDITKGVQY 10 134 569.3108407004488 1136.6071284676975 2 569.3113891482353 MULTI CID FTMS 0 0 0 6521 274692.84375 0.1346378532765743 -2 0.2877235412597656 9 Unmodified _LTDITKGVQY_ ENSG00000167658|ENST00000309311|EEF2 84.5221896805406 0.0133617038110099 2 {I|L}TD{I|L}[KA]SVQY 10 2 + 80.182 0.0 0.0 7.0545 7.0545 91.852 0.0 0.0 0.0 32.56443595845841 1.4608280609188284 1.4608280609188284 9.810450018512924 0 1.9731975075880328 2.0 0.0 1.5044321917401078 {I|L}TD{I|L}[KA]SVQY;[{I|L}T]DT[KG]V{I|L}QY;[{I|L}T]DT[KG]{I|L}VQY;[{I|L}T]D[KG]VT{I|L}QY;[{I|L}T]D[KG]VQT{I|L}Y;[{I|L}T]DKKE{I|L}QY;[{I|L}T]DT[KG]VQ{I|L}Y;[{I|L}T]D[KG]TV{I|L}QY;[{I|L}T]DT[KG]{I|L}N{I|L}Y;[{I|L}T]D[KG]T{I|L}VQY 7.0545;6.1914;6.0815;6.0141;5.9967;5.8141;5.7503;5.7492;5.6404;5.6393 -;-;-;-;-;-;-;-;-;- 3487 + 1 1.864 106654.4 1.0 3121 3407 6521 DOHH2_400M_050219_2,6530 DOHH2_400M_050219_2,6530,LTDITKGVQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6531 35.07 236.0 377530.0 25 0 37045.0 + -1 EELGMGAEHL 10 93 551.246346403376 1100.478139873552 2 551.2462646365166 MULTI CID FTMS 0 0 0 6521 254451.3125 1.0 0 0.0 10 Oxidation (M) _EELGM(Oxidation (M))GAEHL_ REV__ENSG00000197858|ENST00000355091|GPAA1;REV__ENST00000529638.1_1_8:145139936-145140095:+|nuORF;REV__ENST00000530796.1_1_8:145139736-145140383:+|nuORF;REV__ENST00000531593.1_1_8:145139661-145140095:+|nuORF;REV__ENST00000534072.1_1_8:145139936-145140713:+|nuORF;REV__nc|ENSG00000197858|O43292-2|GPAA1 32.30548876998284 0.2428506522065767 2 EE{I|L}{I|L}[C(Carbamidomethyl (C))M]{I|L}E 8 -1 44.729 0.0 0.0 4.0645 0.0 0.0 0.0 80.01493250064686 80.01493250064686 32.738956344972934 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 1.1307196863200843 0.0 EE{I|L}{I|L}[C(Carbamidomethyl (C))M]{I|L}E 4.0645 - 280 + 1 1.864 71525.8 1.0 3122 3407 6521 DOHH2_400M_050219_2,6531 DOHH2_400M_050219_2,6531,EELGMGAEHL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6532 35.073 160.0 433340.0 25 0 53973.0 + 40809 VLLSKENSL 9 80 501.7966884854149 0 501.7970153689384 PEAK CID FTMS 0 0 0 6521 256717.625 1.0 0 0.0 11 Unmodified _VLLSKENSL_ ENSG00000108021|ENST00000695737|TASOR2 68.08070601005525 0.0150358085444205 2 {I|L}{I|L}S{M(Oxidation (M))|F}NKD 7 5 39.416 0.0 0.0 3.9354 0.0 0.0 99.07010929329222 82.06693445377186 181.13704374706407 0.0 0.0 0.0 0.0 0 0.6435078169319297 0.0 1.3494850021680094 0.7302046884880937 {I|L}{I|L}S{M(Oxidation (M))|F}NKD 3.9354 - 327 + 1 1.864 60086.9 1.0 3123 3407 6521 DOHH2_400M_050219_2,6532 DOHH2_400M_050219_2,6532,VLLSKENSL True True VLLSKENSL 35.073459 501.797015368938 1442149.5 6521.0 ENSG00000108021|ENST00000695737|TASOR2 4.8265384038289385 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6533 35.082 472.0 209800.0 25 0 13696.0 -1 0 82 910.9155704039888 1819.8165878747773 2 910.9173461794852 MULTI CID FTMS 0 0 0 6521 229847.84375 0.558274424602378 1 -0.1092033386230468 12 2 [NP]{I|L}N[HM]REEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 54.804 0.0 0.0 3.0115 3.0115 68.294 0.0 0.0 0.0 3.4678748622465605 35.11107503885448 3.4678748622465605 2.269987279362624 0 1.424742501084005 0.0 0.0 0.8494850021680094 [NP]{I|L}N[HM]REEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HT][PA]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HT][PA]E{I|L}NNP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM]REEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG[HM]REEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM][VG]EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM]REEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM]REE{I|L}NNP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEER[HM]{[TV]|[{I|L}S]}[YG];[NP]{I|L}N[HM]REEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.0115;2.8868;2.6659;2.5152;2.5152;2.5152;2.5152;2.2412;2.0063;1.8038 -;-;-;-;-;-;-;-;-;- 553 1 1.864 70920.4 1.0 3124 3407 6521 DOHH2_400M_050219_2,6533 DOHH2_400M_050219_2,6533, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6534 35.087 309.0 237690.0 25 0 19850.0 + 44918 YPPPHQVF 8 99 492.7500487937923 983.4855446543846 2 492.7500182986259 MULTI CID FTMS 0 0 0 6521 157420.171875 0.2767289857013479 4 -0.3322257995605469 13 Unmodified _YPPPHQVF_ ENSG00000076248|ENST00000242576|UNG;ENST00000540158.1_1_12:109535484-109537104:+|nuORF;nc|ENSG00000076248|P13051-2|UNG 32.116972079565 0.368454113111938 2 YPPP[HQ]V{M(Oxidation (M))|F} 8 0 + 52.172 0.0 0.0 5.3048 5.3048 80.759 0.0 0.0 0.0 37.27584469741785 2.464577609514471 2.464577609514471 6.307969835171292 0 0.4247425010840047 2.0 0.0 0.0 + + YPPP[HQ]V{M(Oxidation (M))|F};YP[MT]{[QV]|[N{I|L}]|[RA]|[KV]}V{M(Oxidation (M))|F};YP[H{I|L}]{[MG]|[TS]}{I|L}[PG];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PTPPP{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[NV]|[RG]}[H{I|L}]{[QN]|[E{I|L}]|[KN]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPTPP{[QN]|[E{I|L}]|[KN]};Y[YK][HQ]V{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PT[YK]{[QN]|[E{I|L}]|[KN]};[HQ]{[QV]|[N{I|L}]|[RA]|[KV]}[KC]{[QN]|[E{I|L}]|[KN]};[{I|L}V][WM]PP{[QN]|[E{I|L}]|[KN]} 5.3048;4.6634;2.428;1.4416;1.2084;1.037;0.89319;0.34785;0.34588;0.29583 +;-;-;-;-;-;-;-;-;- + 481 + 1 1.864 61120.4 1.0 3125 3407 6521 DOHH2_400M_050219_2,6534 DOHH2_400M_050219_2,6534,YPPPHQVF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6535 35.097 552.0 258730.0 25 0 54227.0 + 30959 RLAAKFPI 8 136 458.2938175915252 0 458.2912780642509 PEAK CID FTMS 0 0 0 6521 131408.578125 1.0 0 0.0 14 Unmodified _RLAAKFPI_ REV__ENSG00000088854|ENST00000252032|DNAAF9 9.347437153973935 0.5488964601725408 2 PYR 3 -1 8.9486 0.0 0.0 0.97845 0.0 0.0 59.0540073313577 436.28254114322505 495.33654847458274 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 PYR 0.97845 - 108 + 1 1.864 115313.3 1.0 3126 3407 6521 DOHH2_400M_050219_2,6535 DOHH2_400M_050219_2,6535,RLAAKFPI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6536 35.111 800.0 101220.0 25 0 6201.7 -1 0 91 849.8634948636435 1697.712436794087 2 850.3643066287041 MULTI CID FTMS 0 0 0 6521 113533.6015625 1.0 0 0.0 15 2 {[YC]|[HE]}S{[ET]|[MV]}G{[C(Carbamidomethyl (C))G]|[NC]}AQQNA{M(Oxidation (M))|F}Y 15 -1 + 62.712 0.0 0.0 3.6939 3.6939 72.125 0.0 0.0 0.0 4.091442386047923 42.37221780247541 4.091442386047923 3.679767852945943 0 0.7742275032520141 0.958607314841775 0.4247425010840047 0.8494850021680094 {[YC]|[HE]}S{[ET]|[MV]}G{[C(Carbamidomethyl (C))G]|[NC]}AQQNA{M(Oxidation (M))|F}Y;{[YC]|[HE]}S{[ET]|[MV]}G[C(Carbamidomethyl (C))Q]QQNA{M(Oxidation (M))|F}Y;{[YC]|[HE]}S{[ET]|[MV]}G[C(Carbamidomethyl (C))K]QQNA{M(Oxidation (M))|F}Y;{[YC]|[HE]}S{[WT]|[RM]}{[C(Carbamidomethyl (C))G]|[NC]}AQQNA{M(Oxidation (M))|F}Y;{[YC]|[HE]}S{[ET]|[MV]}[C(Carbamidomethyl (C))N]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[HN]G{[C(Carbamidomethyl (C))G]|[NC]}AQQNA{M(Oxidation (M))|F}Y;[EP]TADQQAE[YT][EP]GY;{[MS]|[{M(Oxidation (M))|F}A]}N[HN]G{[C(Carbamidomethyl (C))G]|[NC]}AQQNA{M(Oxidation (M))|F}Y;{[YC]|[HE]}S{[C(Carbamidomethyl (C))G]|[NC]}{[WT]|[RM]}AQQNA{M(Oxidation (M))|F}Y;{[YC]|[HE]}S{[WT]|[RM]}[C(Carbamidomethyl (C))K]QQNA{M(Oxidation (M))|F}Y 3.6939;3.4772;3.4772;3.2999;3.2999;3.202;3.1778;3.1386;3.1225;3.0844 -;-;-;-;-;-;-;-;-;- 1071 1 1.864 59446.8 0.6100000143051147 3127 3407 6521 DOHH2_400M_050219_2,6536 DOHH2_400M_050219_2,6536, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6537 35.119 432.0 199980.0 25 0 20210.0 + -1 PYEKLMNKQ 9 119 583.797370107426 1165.580187281652 2 584.2981445193291 MULTI CID FTMS 0 0 0 6521 110450.5859375 0.066002099230597 8 -0.7635459899902344 16 Oxidation (M) _PYEKLM(Oxidation (M))NKQ_ REV__ENST00000373670.5_1_9:125608000-125608111:-|nuORF 20.453626601364224 0.2830276176381075 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E 3 -1 32.676 0.0 0.0 2.8034 0.0 0.0 0.0 773.3967379205686 773.3967379205686 12.498774732165998 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E 2.8034 + + 271 + 1 1.864 69425.5 1.0 3128 3407 6521 DOHH2_400M_050219_2,6537 DOHH2_400M_050219_2,6537,PYEKLMNKQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6538 35.134 800.0 147950.0 25 0 15446.0 + -1 CIRCYIKKW 9 134 423.891089962768 1268.651440488504 3 423.8911010622978 MULTI CID FTMS 0 0 0 6521 94792.546875 1.0 0 0.0 17 Carbamidomethyl (C) _C(Carbamidomethyl (C))IRCYIKKW_ REV__ENSG00000214717|ENST00000652001|ZBED1 10.150570793230772 0.5619192000662246 2 DPSK{I|L}KW 7 -1 62.7 0.0 0.0 4.9423 0.0 0.0 396.17515761543126 0.0 396.17515761543126 0.0 48.7090362699032 0.0 0.0 0 2.610924374808178 0.0 0.3807196863200844 0.0 DPSK{I|L}KW 4.9423 - 312 1 1.864 100937.2 0.4300000071525574 3129 3407 6521 DOHH2_400M_050219_2,6538 DOHH2_400M_050219_2,6538,CIRCYIKKW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6539 35.148 800.0 141200.0 25 0 16462.0 -1 FAIMNCDKMCV 11 110 710.7921899293232 1419.5698269254465 2 711.2923461794853 MULTI CID FTMS 0 0 0 6521 88006.328125 0.5434337002115399 -2 0.2877235412597656 18 2 Carbamidomethyl (C),2 Oxidation (M) _FAIM(Oxidation (M))NC(Carbamidomethyl (C))DKM(Oxidation (M))C(Carbamidomethyl (C))V_ ENSG00000179709|ENST00000291971|NLRP8;nc|ENSG00000179709|Q86W28-2|NLRP8 5.731851221503515 0.8481046878870278 2 P{[ET]|[MV]}WQQAED[WM] 11 -1 + 62.924 0.0 0.0 4.4326 4.4326 79.856 0.0 0.0 0.0 38.30472688936325 5.862435673934272 5.862435673934272 9.128498242810991 0 0.0 0.0 0.805462187404089 0.2887254899964357 P{[ET]|[MV]}WQQAED[WM];P{[ET]|[MV]}W[AG]QAED[WM];P{[ET]|[MV]}{[DA]|[EG]}QQAED[WM];P{[ET]|[MV]}WQ[AG]AED[WM] 4.4326;3.7895;3.7895;3.5862 -;-;-;- 428 + 1 1.864 84269.5 0.6000000238418579 3130 3407 6521 DOHH2_400M_050219_2,6539 DOHH2_400M_050219_2,6539,FAIMNCDKMCV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6540 35.152 216.0 212740.0 25 0 29520.0 + 42206 VSEVSSLNY 9 79 499.24632581310846 996.4780986930168 2 499.2464477419853 MULTI CID FTMS 0 0 0 6521 90079.9296875 1.0 0 0.0 19 Unmodified _VSEVSSLNY_ ENSG00000117000|ENST00000372771|RLF 21.74664581756881 0.2544899275067181 2 NY 2 7 19.068 0.0 0.0 1.9135 0.0 0.0 701.3593070443826 0.0 701.3593070443826 0.0 5.395906230238124 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + NY 1.9135 + + 129 + 1 1.864 44487.2 1.0 3131 3407 6521 DOHH2_400M_050219_2,6540 DOHH2_400M_050219_2,6540,VSEVSSLNY False True VSEVSSLNY 35.151625 499.246447741985 366323.4375 6521.0 ENSG00000117000|ENST00000372771|RLF 3.0195109049479165 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6541 35.154 50.0 684400.0 25 0 58392.0 + -1 TDKMFITY 8 62 517.7479528730333 0 517.7477294802666 PEAK CID FTMS 0 0 0 6521 538159.0625 0.3309207369326673 1 -0.1092033386230468 20 Oxidation (M) _TDKM(Oxidation (M))FITY_ REV__ENST00000547660.5_1_12:51442859-51449955:+|nuORF 14.581692164780916 0.4900557725783909 2 {I|L}AD[RV]E 6 -1 16.7 0.0 0.0 1.6159 0.0 0.0 215.04948133024783 132.0459383600219 347.0954196902697 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {I|L}AD[RV]E 1.6159 - 35 + 1 1.864 31030.0 1.0 3132 3407 6521 DOHH2_400M_050219_2,6541 DOHH2_400M_050219_2,6541,TDKMFITY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6543 35.159 88.0 870010.0 25 0 107580.0 + 43974 YIDDRGFRY 9 84 402.1963092042759 1203.5670982130275 3 402.1963378787041 MULTI CID FTMS 0 0 0 6542 443340.96875 0.1743556726624321 2 -0.1562156677246093 1 Unmodified _YIDDRGFRY_ ENSG00000149418|ENST00000278742|ST14 16.565877749689598 0.3882643987948875 2 Y{I|L}DDR 5 4 62.563 0.0 0.0 5.1981 0.0 0.0 0.0 538.2420137994749 538.2420137994749 51.59379381312206 0.0 0.0 0.0 0 0.0 2.0 0.0 0.7614393726401688 + Y{I|L}DDR 5.1981 + + 127 + 1 1.864 63704.2 1.0 3133 3408 6542 DOHH2_400M_050219_2,6543 DOHH2_400M_050219_2,6543,YIDDRGFRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6544 35.165 359.0 265170.0 25 0 42134.0 + 43976 YIDDRGFRY 9 83 602.7908005591316 1203.5670481850632 2 602.7908203005791 MULTI CID FTMS 0 0 0 6542 137550.03125 0.1617401391855598 2 -0.1562156677246093 2 Unmodified _YIDDRGFRY_ ENSG00000149418|ENST00000278742|ST14 21.59015148037692 0.2564810811560323 2 Y{I|L}DDRR 6 3 52.382 0.0 0.0 4.3523 0.0 0.0 0.0 382.1363619440063 382.1363619440063 32.77819381628923 0.0 0.0 0.0 0 0.218765315847925 2.0 0.4247425010840047 0.3807196863200844 Y{I|L}DDRR 4.3523 - 54 + 1 1.864 71774.3 1.0 3134 3408 6542 DOHH2_400M_050219_2,6544 DOHH2_400M_050219_2,6544,YIDDRGFRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6545 35.167 85.0 973840.0 25 0 98436.0 + 31649 RRGDFIHVM 9 86 377.53402590558005 1129.5802483169402 3 377.5341064333916 MULTI CID FTMS 0 0 0 6542 445736.78125 0.2380056384847441 -2 0.2839088439941406 3 Unmodified _RRGDFIHVM_ ENSG00000177885|ENST00000316804|GRB2;ENST00000462266.1_1_17:73316451-73322393:-|nuORF;nc|ENSG00000177885|P62993-2|GRB2 26.020703789607367 0.2001090068861241 2 [{M(Oxidation (M))|F}T]H{I|L}{M(Oxidation (M))|F}VHVM 9 5 + 37.802 0.0 0.0 3.3465 3.3465 82.714 0.0 0.0 0.0 18.505018913849657 7.211761926229137 7.211761926229137 37.801850288175565 0 0.0 0.0 0.0 0.0 [{M(Oxidation (M))|F}T]H{I|L}{M(Oxidation (M))|F}VHVM 3.3465 - 86 + 1 1.864 74584.5 1.0 3135 3408 6542 DOHH2_400M_050219_2,6545 DOHH2_400M_050219_2,6545,RRGDFIHVM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6546 35.17 110.0 516970.0 25 0 81919.0 + 69 AAFEKQVL 8 87 453.2581065409385 904.501660148677 2 453.2581664919853 MULTI CID FTMS 0 0 0 6542 383206.65625 1.0 0 0.0 4 Unmodified _AAFEKQVL_ ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1 42.09456458481378 0.1992492688217789 2 AA{M(Oxidation (M))|F}EKQV{I|L} 8 0 + 31.252 0.0 0.0 3.4552 3.4552 75.356 0.0 0.0 0.0 17.2729783057342 -14.559771852360797 -14.559771852360797 7.551083927183413 0 1.1409328277719766 2.0 0.0 0.0 + + AA{M(Oxidation (M))|F}EKQV{I|L};AA{M(Oxidation (M))|F}[WR][RV];AA[YV]QAAV{I|L};[{M(Oxidation (M))|F}E]KQAAV{I|L} 3.4552;2.6204;1.7713;0.91692 +;-;-;- + 137 1 1.864 50761.9 1.0 3136 3408 6542 DOHH2_400M_050219_2,6546 DOHH2_400M_050219_2,6546,AAFEKQVL False True AAFEKQVL 35.169644 453.258166491985 2007070.25 6542.0 ENSG00000125844|ENST00000377813|RRBP1;;nc|ENSG00000125844|Q9P2E9-3|RRBP1 4.186325550079346 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6547 35.176 330.0 319010.0 25 0 20914.0 -1 0 104 881.9126736032672 1761.8107942733343 2 881.9127685427666 MULTI CID FTMS 0 0 0 6542 255237.671875 0.2146847435676103 -4 0.5121841430664062 5 2 [NP]{I|L}N[QP]AQAEN{I|L}NP 14 -1 77.661 0.0 0.0 4.408 0.0 0.0 0.0 258.05762470958933 258.05762470958933 44.42979712652914 0.0 0.0 0.0 0 0.8494850021680094 0.9208187539523752 0.0 0.805462187404089 [NP]{I|L}N[QP]AQAEN{I|L}NP 4.408 - 749 1 1.864 73308.0 1.0 3137 3408 6542 DOHH2_400M_050219_2,6547 DOHH2_400M_050219_2,6547, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6548 35.18 229.0 272680.0 25 0 26459.0 + 20848 LMDSLLVPQ 9 82 508.2776279697644 1014.5407030063288 2 508.7799865603447 MULTI CID FTMS 0 0 0 6542 236372.09375 0.3167565257294975 8 -0.8168144226074219 6 Unmodified _LMDSLLVPQ_ REV__nc|ENSG00000146373|Q8TC41-2|RNF217 12.531546534597751 0.4974689918368763 2 GTPQ 4 -1 35.433 0.0 0.0 3.4925 0.0 0.0 613.3535023419937 0.0 613.3535023419937 0.0 21.938200260161125 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 GTPQ 3.4925 - 59 1 1.864 62430.3 1.0 3138 3408 6542 DOHH2_400M_050219_2,6548 DOHH2_400M_050219_2,6548,LMDSLLVPQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6549 35.184 211.0 385170.0 25 0 31827.0 + 6929 EEFSRAAEKLY 11 98 448.226149834603 1341.656620104009 3 448.2264587283134 MULTI CID FTMS 0 0 0 6542 238139.15625 1.0 0 0.0 7 Unmodified _EEFSRAAEKLY_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 15.248480904072842 0.7179608125786238 2 EE[QA]E{I|L}K[YG]{I|L}Y 11 7 + 42.439 0.0 0.0 3.1632 3.1632 74.153 0.0 0.0 0.0 29.251835593548243 4.357285695614365 4.357285695614365 6.98970004336018 0 0.0 1.2218487496163564 0.0 0.0 EE[QA]E{I|L}K[YG]{I|L}Y;EE[QA]E{I|L}K[YG]Y{I|L};EE{M(Oxidation (M))|F}{M(Oxidation (M))|F}K[{I|L}T][PG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ET]|[MV]}[KA]{[NV]|[RG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[HC];{[ET]|[MV]}[KA][MT]K{M(Oxidation (M))|F}{M(Oxidation (M))|F}[HC] 3.1632;2.6422;1.1719;0.71612;0.49175 -;-;-;-;- 286 + 1 1.864 71469.6 1.0 3139 3408 6542 DOHH2_400M_050219_2,6549 DOHH2_400M_050219_2,6549,EEFSRAAEKLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6550 35.188 184.0 515800.0 25 0 64263.0 + 27695 PLKRATYSF 9 125 361.5378419709805 1081.5916965131416 3 361.5377380251884 MULTI CID FTMS 0 0 0 6542 220674.734375 0.6777488663701752 -1 0.1092033386230468 8 Unmodified _PLKRATYSF_ REV__chr17:36211890-36212497|40|14.5|0.78|4.21|+|ENST00000620576|CCL4L2,CCL4L2;REV__ENSG00000275302|ENST00000615863|CCL4;REV__ENSG00000276070|ENST00000617405|CCL4L2;REV__ENST00000590761.1_17:34640712-34640859:+|nuORF;REV__nc|ENSG00000276070|Q8NHW4-10|CCL4L1;REV__nc|ENSG00000276070|Q8NHW4-2|CCL4L1;REV__nc|ENSG00000276070|Q8NHW4-3|CCL4L1;REV__nc|ENSG00000276070|Q8NHW4-5|CCL4L1;REV__nc|ENSG00000276070|Q8NHW4-6|CCL4L1;REV__nc|ENSG00000276070|Q8NHW4|CCL4L1 10.823927491677226 0.5436922275383211 2 TSY{M(Oxidation (M))|F} 4 -1 20.534 0.0 0.0 1.8985 0.0 0.0 565.368944236525 0.0 565.368944236525 0.0 5.841218823962109 0.0 0.0 0 0.2742275032520141 0.0 0.6989700043360187 0.0 TSY{M(Oxidation (M))|F} 1.8985 - 54 1 1.864 79417.0 1.0 3140 3408 6542 DOHH2_400M_050219_2,6550 DOHH2_400M_050219_2,6550,PLKRATYSF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6551 35.195 392.0 306680.0 25 0 26542.0 + 5242 LTDPSSPTISSY 12 134 634.3059987473596 1266.597444561519 2 634.3066284060478 MULTI CID FTMS 0 0 0 6542 221781.21875 0.4646306800977708 -1 0.1092033386230468 9 Unmodified _DKDEIPTISSY_ ENSG00000165480|ENST00000314759|SKA3;ENST00000298260.8_1_13:21729833-21750660:-|nuORF;nc|ENSG00000165480|Q8IX90-3|SKA3 53.40400417844725 0.0987786977674846 2 [{I|L}T]PSSDPT{I|L} 9 9 76.155 0.0 0.0 6.0126 0.0 0.0 0.0 352.1149976223191 352.1149976223191 20.46938492162596 0.0 0.0 0.0 0 1.0 1.3010299956639813 3.254432191740108 0.0 [{I|L}T]PSSDPT{I|L} 6.0126 - 4942 1 1.864 96047.9 1.0 3141 3408 6542 DOHH2_400M_050219_2,6551 DOHH2_400M_050219_2,6551,DKDEIPTISSY True True LTDPSSPTISSY 35.194564 634.306628406048 2646441.5 6542.0 ENSG00000165480|ENST00000314759|SKA3;;ENST00000298260.8_1_13:21729833-21750660:-|nuORF;;nc|ENSG00000165480|Q8IX90-3|SKA3 7.966554323832194 2.0 False 12.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6552 35.199 246.0 422780.0 25 0 51258.0 + 909 AEYNSDLHQF 10 110 612.2695708609551 1222.5245887887102 2 612.2676269412041 MULTI CID FTMS 0 0 0 6542 208506.328125 0.1441572020281991 -2 0.2839088439941406 10 Unmodified _AEYNSDLHQF_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 79.59630418116434 0.0173986606250113 2 {[CP]|[EA]}YNSD{I|L}HQ{M(Oxidation (M))|F} 10 0 + 74.677 0.0 0.0 6.1084 6.1084 86.618 0.0 0.0 0.0 36.548506298537305 19.969209759735698 19.969209759735698 9.164539485499247 0 0.9247425010840048 0.0 0.3054621874040891 2.0471062485323515 + + {[CP]|[EA]}YNSD{I|L}HQ{M(Oxidation (M))|F};{[CP]|[EA]}YGGSD{I|L}HQ{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ENSD{I|L}HQ{M(Oxidation (M))|F};{[CP]|[EA]}YNSD{I|L}[EP]W;{[CP]|[EA]}YNSD{I|L}H[AG]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EGGSD{I|L}HQ{M(Oxidation (M))|F};{[CP]|[EA]}YNSR[QP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[H{I|L}]DHRSNE{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ENSD{I|L}[EP]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ENSD{I|L}H[AG]{M(Oxidation (M))|F} 6.1084;5.3588;4.9211;4.4088;4.3791;4.1714;3.8794;3.3509;3.2215;3.1918 +;-;-;-;-;-;-;-;-;- + 2995 + 1 1.864 82062.2 1.0 3142 3408 6542 DOHH2_400M_050219_2,6552 DOHH2_400M_050219_2,6552,AEYNSDLHQF True True AEYNSDLHQF 35.199156 612.267626941204 15762832.0 6542.0 ENST00000465029.5_1_2:111419157-111435602:-|nuORF;;nc|ENSG00000169679|O43683-2|BUB1;;ENSG00000169679|ENST00000302759|BUB1;;nc|ENSG00000169679|O43683-3|BUB1 8.65184243520101 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6553 35.203 208.0 338220.0 25 0 32786.0 + 45325 YSKPRLATF 9 97 541.8025645655089 1081.5905761978177 2 541.8047363162041 MULTI CID FTMS 0 0 0 6542 179005.734375 0.917227439017458 -1 0.1092033386230468 11 Unmodified _YSKPRLATF_ ENSG00000167283|ENST00000300688|ATP5MG;ENST00000527186.1_1_11:118277587-118279810:+|nuORF;ENST00000533172.5_1_11:118272380-118279724:+|nuORF;ENST00000534385.1_1_11:118272380-118277824:+|nuORF 43.77239144664712 0.0547478964384323 2 YSK 3 6 46.682 0.0 0.0 4.3161 0.0 0.0 0.0 700.3782777197041 700.3782777197041 16.223637474483468 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + YSK 4.3161 + + 105 + 1 1.864 58524.1 1.0 3143 3408 6542 DOHH2_400M_050219_2,6553 DOHH2_400M_050219_2,6553,YSKPRLATF True True YSKPRLATF 35.203127 541.804736316204 1172889.5 6542.0 ENST00000534385.1_1_11:118272380-118277824:+|nuORF;;ENST00000527186.1_1_11:118277587-118279810:+|nuORF;;ENST00000533172.5_1_11:118272380-118279724:+|nuORF;;ENSG00000167283|ENST00000300688|ATP5MG 6.50657335917155 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6554 35.207 191.0 385940.0 25 0 42719.0 + + -1 GSDPRSWEY 9 103 548.7382697119027 0 548.7385742068291 PEAK CID FTMS 0 0 0 6542 154283.109375 0.6239829118961155 6 -0.5477180480957031 12 Carbamidomethyl (C) _IDYYC(Carbamidomethyl (C))SLY_ ENSG00000087074|ENST00000200453|PPP1R15A;nc|ENSG00000087074|O75807-2|PPP1R15A 9.347437153973935 0.5488964601725408 2 E 1 -1 9.2917 0.0 0.0 0.8482 0.0 0.0 181.07631839612208 782.3208712213499 963.397189617472 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 E 0.8482 - 31 + 1 1.864 59072.9 1.0 3144 3408 6542 DOHH2_400M_050219_2,6554 DOHH2_400M_050219_2,6554,IDYYCSLY False False GSDPRSWEY 35.2068 548.7388 1205071.125 6542.0 ENSG00000087074|ENST00000200453|PPP1R15A;;nc|ENSG00000087074|O75807-2|PPP1R15A 3.448749621709188 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6555 35.213 299.0 267670.0 25 0 30828.0 + 5300 DLDDAQRTLY 10 106 605.2913359451924 1208.5681189571849 2 605.2918578982353 MULTI CID FTMS 0 0 0 6542 132299.265625 0.8559973933343604 -1 0.1092033386230468 13 Unmodified _DLDDAQRTLY_ ENSG00000227124|ENST00000652011|ZNF717;ENST00000491507.1_1_3:75765690-75790926:-|nuORF 57.10758569107544 0.0441734977746303 2 {NN|[MP]|[D{I|L}]|[EV]}DDAQ 6 4 64.838 0.0 0.0 5.3649 0.0 0.0 0.0 548.2828207007655 548.2828207007655 13.853860396956904 0.0 0.0 0.0 0 1.2614393726401687 2.0 0.0 0.3807196863200844 + {NN|[MP]|[D{I|L}]|[EV]}DDAQ 5.3649 + + 619 + 1 1.864 61410.3 1.0 3145 3408 6542 DOHH2_400M_050219_2,6555 DOHH2_400M_050219_2,6555,DLDDAQRTLY True True DLDDAQRTLY 35.21346 605.291857898235 1068299.125 6542.0 ENSG00000227124|ENST00000652011|ZNF717;;ENST00000491507.1_1_3:75765690-75790926:-|nuORF 7.772515614827474 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6556 35.215 86.0 657040.0 25 0 51654.0 + 26391 NTDLMTSQCY 10 101 588.2384720304343 1174.4623911276683 2 588.2399169802666 MULTI CID FTMS 0 0 0 6542 131436.109375 0.0283624728119287 -3 0.3969268798828125 14 Unmodified _NTDLMTSQCY_ REV__ENSG00000197121|ENST00000354764|PGAP1;REV__ENST00000470179.5_1_2:197712669-197791463:-|nuORF;REV__nc|ENSG00000197121|Q75T13-2|PGAP1;REV__nc|ENSG00000197121|Q75T13-3|PGAP1;REV__nc|ENSG00000197121|Q75T13-4|PGAP1 19.256988751693697 0.5244284437930726 2 [NS]E{I|L}SG 6 -1 52.215 0.0 0.0 4.4459 0.0 0.0 0.0 584.1693973134685 584.1693973134685 29.512131247412512 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.2971062485323517 1.0994850021680094 [NS]E{I|L}SG 4.4459 - 346 1 1.864 47759.5 1.0 3146 3408 6542 DOHH2_400M_050219_2,6556 DOHH2_400M_050219_2,6556,NTDLMTSQCY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6557 35.22 253.0 217900.0 25 0 16697.0 + 25935 NLMDRKVL 8 108 494.7841529618297 0 494.7837707400322 PEAK CID FTMS 0 0 0 6542 135458.234375 1.0 0 0.0 15 Unmodified _NLMDRKVL_ ENSG00000105939|ENST00000242351|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-3|ZC3HAV1 34.93206674587334 0.1859922032750151 2 VQV[TA]M 6 8 21.292 0.0 0.0 2.156 0.0 0.0 131.09668747937116 224.1039217584594 355.2006092378306 0.0 0.0 0.0 0.0 0 1.642159058960253 0.0 0.0 0.0 VQV[TA]M 2.156 - 125 + 1 1.864 45342.8 1.0 3147 3408 6542 DOHH2_400M_050219_2,6557 DOHH2_400M_050219_2,6557,NLMDRKVL False True NLMDRKVL 35.220093 494.783770740032 758082.8125 6542.0 ENSG00000105939|ENST00000242351|ZC3HAV1;;nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1;;nc|ENSG00000105939|Q7Z2W4-3|ZC3HAV1 5.630706310272217 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6558 35.231 648.0 281390.0 25 0 33853.0 + 38108 TPLKKVIL 8 161 456.3180088501686 910.6214647671372 2 456.3178283572197 MULTI CID FTMS 0 0 0 6542 103952.25 1.0 0 0.0 16 Unmodified _TPLKKVIL_ ENSG00000164934|ENST00000612750|DCAF13;ENST00000495256.1_1_7:105766226-105766550:+|nuORF 32.30548876998284 0.3644845974844379 2 TP{I|L} 3 5 38.702 0.0 0.0 4.2501 0.0 0.0 0.0 596.4137056940061 596.4137056940061 5.606453682567995 0.0 0.0 0.0 0 0.4545391030138068 1.3979400086720375 0.0 0.0 + TP{I|L} 4.2501 + + 98 + 1 1.864 143670.6 1.0 3148 3408 6542 DOHH2_400M_050219_2,6558 DOHH2_400M_050219_2,6558,TPLKKVIL False True TPLKKVIL 35.231373 456.31782835722 938384.625 6542.0 ENSG00000164934|ENST00000612750|DCAF13;;ENST00000495256.1_1_7:105766226-105766550:+|nuORF 4.508217970530192 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6559 35.245 800.0 84758.0 25 0 6494.0 -1 0 81 918.4193950315004 1834.8242371298008 2 918.9134399294852 MULTI CID FTMS 0 0 0 6542 98838.9453125 0.0909837705024044 8 -0.8168144226074219 17 2 DAD{I|L}[NP]{[QN]|[E{I|L}]|[KN]} 8 -1 32.708 0.0 0.0 1.7826 0.0 0.0 949.4592359189336 0.0 949.4592359189336 0.0 19.5205343810445 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3494850021680094 DAD{I|L}[NP]{[QN]|[E{I|L}]|[KN]} 1.7826 - 311 1 1.864 52639.5 0.4699999988079071 3149 3408 6542 DOHH2_400M_050219_2,6559 DOHH2_400M_050219_2,6559, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6560 35.256 549.0 191290.0 25 0 14142.0 39998 VGDGVNDSPAL 11 163 522.2539377247037 1042.4933225162074 2 522.2535888552666 MULTI CID FTMS 0 0 0 6542 85413.8203125 0.5636561544384091 6 -0.5477180480957031 18 Unmodified _VGDGVNDSPAL_ ENSG00000123191|ENST00000242839|ATP7B;nc|ENSG00000123191|P35670-2|ATP7B;nc|ENSG00000123191|P35670-3|ATP7B;nc|ENSG00000123191|P35670-4|ATP7B 9.38312468134398 0.8308777417566128 2 TGTV[NP]A{I|L} 8 5 20.621 0.0 0.0 1.978 0.0 0.0 271.0676352876563 0.0 271.0676352876563 0.0 7.432988475330955 0.0 0.0 0 0.5451140161145328 0.0 0.0 0.0 TGTV[NP]A{I|L} 1.978 - 906 + 1 1.864 88563.9 1.0 3150 3408 6542 DOHH2_400M_050219_2,6560 DOHH2_400M_050219_2,6560,VGDGVNDSPAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6561 35.259 123.0 650610.0 25 0 100080.0 + 31652 RRGDFIHVM 9 88 565.797755974954 1129.580959016708 2 565.7974731326103 MULTI CID FTMS 0 0 0 6542 125682.046875 0.3106063543148199 -1 0.1092033386230468 19 Unmodified _RRGDFIHVM_ ENSG00000177885|ENST00000316804|GRB2;ENST00000462266.1_1_17:73316451-73322393:-|nuORF;nc|ENSG00000177885|P62993-2|GRB2 42.312485326615175 0.0627620958981271 2 RR[DG]{M(Oxidation (M))|F}{I|L}HVM 9 0 + 62.017 0.0 0.0 5.4903 5.4903 79.812 0.0 0.0 0.0 4.771212547196626 14.973024840566469 4.771212547196626 4.771212547196626 0 1.2614393726401687 0.0 0.0 1.6549471895720984 + + RR[DG]{M(Oxidation (M))|F}{I|L}HVM;{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}HVM;[{M(Oxidation (M))|F}T]HV{M(Oxidation (M))|F}{I|L}HVM;[{M(Oxidation (M))|F}T]HV{[WT]|[RM]}S[RP];[HV][KC]{M(Oxidation (M))|F}{I|L}[PG]VM;[{M(Oxidation (M))|F}T]H{I|L}{M(Oxidation (M))|F}VM[HV];[{M(Oxidation (M))|F}T]H{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}S[RP];{[ET]|[MV]}[TA][KT]{I|L}HVM;[HV][KC]{M(Oxidation (M))|F}{I|L}[RP]M;{[QN]|[E{I|L}]|[KN]}WW{I|L}[PG]VM 5.4903;5.0679;3.8998;3.3019;3.2805;3.0496;2.9021;2.4194;2.1338;1.6611 +;-;-;-;-;-;-;-;-;- + 278 1 1.864 64942.0 1.0 3151 3408 6542 DOHH2_400M_050219_2,6561 DOHH2_400M_050219_2,6561,RRGDFIHVM True True RRGDFIHVM 35.258579 565.79747313261 32507171.25 6542.0 ENST00000462266.1_1_17:73316451-73322393:-|nuORF;;ENSG00000177885|ENST00000316804|GRB2;;nc|ENSG00000177885|P62993-2|GRB2 7.834348360697429 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6563 35.274 667.0 156170.0 25 0 14185.0 + 20268 LLDQGQLNKY 10 126 596.3220610503188 1190.6295691674377 2 596.3228027224541 MULTI CID FTMS 0 0 0 6562 122803.6796875 0.1492600632057317 2 -0.1185951232910156 1 Unmodified _LLDQGQLNKY_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 69.10491478415734 0.0189654488676922 2 {I|L}{I|L}DQ{[QG]|[NA]}{I|L}NKY 10 0 + 85.76 0.0 0.0 7.2029 7.2029 88.89 0.0 0.0 0.0 36.53212513775344 8.129133566428564 8.129133566428564 8.129133566428564 0 0.805462187404089 2.0 0.0 1.6382104921644451 + + {I|L}{I|L}DQ{[QG]|[NA]}{I|L}NKY;{I|L}{I|L}DQ{[QG]|[NA]}{I|L}NYK;{I|L}{I|L}DQ{[QG]|[NA]}{I|L}GGKY;{I|L}{I|L}D[AG]{[QG]|[NA]}{I|L}NKY;{I|L}{I|L}DQ{[QG]|[NA]}{I|L}GGYK;{I|L}{I|L}D[AG]{[QG]|[NA]}{I|L}NYK;{I|L}{I|L}DQ{[QG]|[NA]}[YK]VQ;{I|L}{I|L}DQVV{[YD]|[{M(Oxidation (M))|F}M]}VQ;{I|L}{I|L}DQ{[QG]|[NA]}{I|L}[YK]N;{I|L}{I|L}DQ{[QG]|[NA]}[YK]{I|L}N 7.2029;6.5202;6.4332;6.4332;5.7505;5.7505;5.3193;5.2917;5.2849;4.7197 +;-;-;-;-;-;-;-;-;- + 357 + 1 1.864 77693.4 1.0 3152 3409 6562 DOHH2_400M_050219_2,6563 DOHH2_400M_050219_2,6563,LLDQGQLNKY True True LLDQGQLNKY 35.273581 596.322802722454 9505984.234375 6562.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 7.821485201517741 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6564 35.277 152.0 928400.0 25 0 88753.0 + 13479 HLVDEPQNLIK 11 88 653.361704334249 1304.708855735298 2 653.3619262576103 MULTI CID FTMS 0 0 0 6562 566477.625 0.3212997613340451 -2 0.2136306762695312 2 Unmodified _HLVDEPQNLIK_ CON__P02769 112.04118876639724 0.016203247773655 2 H{I|L}VDE[QP]N{I|L}{I|L}K 11 0 + 119.91 0.0 0.0 9.1909 9.1909 92.121 0.0 0.0 0.0 94.2229003870745 18.323198202617974 18.323198202617974 9.128498242810991 0 3.973197507588033 1.6989700043360187 0.3494850021680094 0.975772496747986 + + H{I|L}VDE[QP]N{I|L}{I|L}K;H{I|L}VDE[QP]GG{I|L}{I|L}K;[H{I|L}]VDE[QP]N{I|L}{I|L}K;[H{I|L}]VDE[QP]GG{I|L}{I|L}K;H{I|L}V{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[HA]N{I|L}{I|L}K;[H{I|L}]VDE{[QG]|[NA]}[PG]{I|L}{I|L}K;H{I|L}[MT]Q[HA]N{I|L}{I|L}K;[QP]N{I|L}{I|L}DDH{I|L}{I|L}K;[QP]GG{I|L}{I|L}DDH{I|L}{I|L}K;[QP]N{I|L}{I|L}DD{I|L}H{I|L}K 9.1909;8.4913;7.717;7.0174;6.1652;6.1048;5.3596;2.8376;2.138;1.9885 +;-;+;-;-;-;-;-;-;- + 458 + 1 1.864 108943.5 1.0 3153 3409 6562 DOHH2_400M_050219_2,6564 DOHH2_400M_050219_2,6564,HLVDEPQNLIK True True False False contaminant PXD020620_cell_line DOHH2_400M_050219_2 6565 35.279 94.0 485360.0 25 0 47152.0 + 39009 TVSAGESVTI 10 79 482.2547430453544 0 482.2534057497978 PEAK CID FTMS 0 0 0 6562 443409.65625 0.8253239119901676 -1 0.1044273376464843 3 Unmodified _TVSAGESVTI_ REV__nc|ENSG00000211819|A0A0B4J280|TRAV40 24.020572477871973 0.2658879206942018 2 {I|L}SEKA 5 -1 23.928 0.0 0.0 2.486 0.0 0.0 218.12519546395248 213.05193506412343 431.177130528076 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}SEKA 2.486 - 137 + 1 1.864 40596.6 1.0 3154 3409 6562 DOHH2_400M_050219_2,6565 DOHH2_400M_050219_2,6565,TVSAGESVTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6566 35.292 800.0 366450.0 25 0 26947.0 -1 HIQMHMDVSAF 11 152 674.2950234092681 1346.575493885336 2 674.2946655154228 MULTI CID FTMS 0 0 0 6562 222815.3125 0.6579992737182442 -1 0.1044273376464843 4 2 Oxidation (M) _HIQM(Oxidation (M))HM(Oxidation (M))DVSAF_ ENST00000441290.6_1_7:114296499-114304492:+|nuORF 9.38312468134398 0.8308777417566128 2 [H{I|L}]A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CA]|SS}TAH{I|L} 11 -1 39.67 0.0 0.0 2.946 0.0 0.0 0.0 168.99047531877468 168.99047531877468 25.02864291241194 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.9247425010840048 0.4247425010840047 [H{I|L}]A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CA]|SS}TAH{I|L} 2.946 - 2789 1 1.864 209976.2 0.8999999761581421 3155 3409 6562 DOHH2_400M_050219_2,6566 DOHH2_400M_050219_2,6566,HIQMHMDVSAF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6567 35.299 372.0 414440.0 25 0 30887.0 + 667 AEMEERFYRY 10 135 465.2115447665368 1392.6128048998105 3 465.2116577029228 MULTI CID FTMS 0 0 0 6562 192704.3125 0.8699142371277221 -1 0.1044273376464843 5 Unmodified _AEMEERFYRY_ ENSG00000111642|ENST00000544040|CHD4;ENST00000536999.1_1_12:6705170-6707214:-|nuORF;nc|ENSG00000111642|Q14839-2|CHD4 46.4752305370441 0.1008384395814411 2 AEMEER{M(Oxidation (M))|F}YRY 10 0 + 93.937 0.0 0.0 6.7454 6.7454 85.537 0.0 0.0 0.0 36.53212513775344 6.020599913279625 6.020599913279625 6.020599913279625 0 0.4247425010840047 2.0 0.4247425010840047 1.3996498648046138 + + AEMEER{M(Oxidation (M))|F}YRY;AEMEER{M(Oxidation (M))|F}YYR;AEMEER{M(Oxidation (M))|F}P[DN]R;AEMEER{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}W;AEMEE[HM]VVRY;AEMEY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVRY;AEMEE[HM]VVYR;AEYTD{[YD]|[{M(Oxidation (M))|F}M]}VVRY;AEMEY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVYR;AEY[HQ][YT]YRY 6.7454;6.3131;5.7334;5.5374;5.2213;4.789;4.789;4.446;4.3566;4.2115 +;-;-;-;-;-;-;-;-;- + 1003 + 1 1.864 124021.0 1.0 3156 3409 6562 DOHH2_400M_050219_2,6567 DOHH2_400M_050219_2,6567,AEMEERFYRY True True AEMEERFYRY 35.299172 465.211657702923 1195846.5 6562.0 ENST00000536999.1_1_12:6705170-6707214:-|nuORF;;ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 6.814016342163086 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6568 35.306 389.0 275890.0 25 0 26436.0 + 6398 LRNKVIIEY 9 123 574.3428173842452 0 574.3442260622978 PEAK CID FTMS 0 0 0 6562 163415.484375 1.0 0 0.0 6 Unmodified _DWLLLVLIY_ nc|ENSG00000117174|Q9NWK9-2|ZNHIT6;ENSG00000117174|ENST00000370574|ZNHIT6 16.942295170755138 0.2326366549411506 2 E 1 9 16.722 0.0 0.0 1.4583 0.0 0.0 181.07409865547032 833.532049202731 1014.6061478582012 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 E 1.4583 - 121 1 1.864 83131.4 1.0 3157 3409 6562 DOHH2_400M_050219_2,6568 DOHH2_400M_050219_2,6568,DWLLLVLIY False False LRNKVIIEY 35.306145 574.344226062298 1017447.0 6562.0 nc|ENSG00000117174|Q9NWK9-2|ZNHIT6;;ENSG00000117174|ENST00000370574|ZNHIT6 3.531822443008423 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6569 35.31 225.0 261080.0 25 0 15639.0 + 22904 LSDHLINQGY 10 102 580.2908427982107 0 580.2905761599541 PEAK CID FTMS 0 0 0 6562 145918.171875 0.7463058362054065 -1 0.1044273376464843 7 Unmodified _LSDHLINQGY_ ENSG00000101194|ENST00000370351|SLC17A9;ENST00000488738.5_1_20:61595350-61598131:+|nuORF;nc|ENSG00000101194|Q9BYT1-2|SLC17A9 24.99096001346401 0.2580721372233971 2 GQN{I|L}{I|L} 5 8 37.206 0.0 0.0 3.2114 0.0 0.0 181.0701366688839 449.1793435572625 630.2494802261464 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 GQN{I|L}{I|L} 3.2114 - 54 + 1 1.864 49723.1 1.0 3158 3409 6562 DOHH2_400M_050219_2,6569 DOHH2_400M_050219_2,6569,LSDHLINQGY False True LSDHLINQGY 35.310405 580.2918 1075899.25 6562.0 nc|ENSG00000101194|Q9BYT1-2|SLC17A9;;ENST00000488738.5_1_20:61595350-61598131:+|nuORF;;ENSG00000101194|ENST00000370351|SLC17A9 8.535907745361328 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6571 35.315 20.0 2678900.0 25 0 688300.0 + 45279 YSDKYGLGY 9 86 533.2479606977075 1064.481368462215 2 533.2481567263603 MULTI CID FTMS 0 0 0 6570 2487681.25 0.1039157032903392 4 -0.3915023803710937 1 Unmodified _YSDKYGLGY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 51.629811660486645 0.0367964933207742 2 YSDK 4 5 56.019 0.0 0.0 5.2625 0.0 0.0 0.0 568.2395113580686 568.2395113580686 21.684531067637423 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.3807196863200844 + YSDK 5.2625 + + 1174 + 1 1.864 51087.4 1.0 3159 3410 6570 DOHH2_400M_050219_2,6571 DOHH2_400M_050219_2,6571,YSDKYGLGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6572 35.316 21.0 2279900.0 25 0 201350.0 43507 WWWWIWWQWW 10 54 874.9037639281709 1747.7929749231416 2 874.9056884646416 MULTI CID FTMS 0 0 0 6570 2210183.0 0.8497215085729225 2 -0.1651268005371093 2 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 2 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 8 45.691 0.0 0.0 2.6142 0.0 0.0 734.3702259748062 0.0 734.3702259748062 0.0 26.62340288297237 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.6142 - 117 1 1.864 39810.4 1.0 3160 3410 6570 DOHH2_400M_050219_2,6572 DOHH2_400M_050219_2,6572,WWWWIWWQWW False False False False splicing PXD020620_cell_line DOHH2_400M_050219_2 6573 35.318 64.0 775960.0 25 0 58151.0 + 833 AETEPIVKM 9 86 509.26707073222633 1016.5195885312528 2 509.2670165896416 MULTI CID FTMS 0 0 0 6570 531209.375 0.3817698587163826 -2 0.1562156677246093 3 Unmodified _AETEPIVKM_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 27.628801355627647 0.1796483985696185 2 {[CP]|[EA]}TE[{I|L}P]VKM 9 0 {[CP]|[EA]} + + 29.055 3.7236 1.8611 2.8582 2.8582 48.68 0.0 0.0 0.0 0.0 6.914642896868664 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + + {[CP]|[EA]}TE[{I|L}P]VKM 2.8582 + + 166 + 1 1.864 43975.3 1.0 3161 3410 6570 DOHH2_400M_050219_2,6573 DOHH2_400M_050219_2,6573,AETEPIVKM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6574 35.321 136.0 570120.0 25 0 34430.0 + 43763 RRGDFIHVM 9 102 382.86581517347247 0 382.8658935427666 PEAK CID FTMS 0 0 0 6570 283714.59375 1.0 0 0.0 4 Unmodified _YEHLFPELV_ ENST00000462266.1_1_17:73316451-73322393:-|nuORF;ENSG00000177885|ENST00000316804|GRB2;nc|ENSG00000177885|P62993-2|GRB2 7.289230182591677 0.3433663536648894 2 E 1 8 3.8089 0.0 0.0 0.49874 0.0 0.0 499.6026192612043 132.04572473697502 631.6483439981794 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2215141619232908 0.0 + E 0.49874 + + 27 + 1 1.864 68320.2 1.0 3162 3410 6570 DOHH2_400M_050219_2,6574 DOHH2_400M_050219_2,6574,YEHLFPELV False False RRGDFIHVM 35.320649 382.865893542767 1356890.0 6570.0 ENST00000462266.1_1_17:73316451-73322393:-|nuORF;;ENSG00000177885|ENST00000316804|GRB2;;nc|ENSG00000177885|P62993-2|GRB2 5.656903584798177 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6575 35.324 195.0 377320.0 25 0 39735.0 + 878 AEVEGAGVKAW 11 99 558.7881975579438 1115.5618421826875 2 558.7883788943291 MULTI CID FTMS 0 0 0 6570 272064.5 0.5328574007938329 -1 0.051788330078125 5 Unmodified _AEVEGAGVKAW_ ENSG00000197070|ENST00000371421|ARRDC1;ENST00000491911.5_1_9:140508423-140509541:+|nuORF 45.739877483867886 0.1412225664835785 2 {[CP]|[EA]}VEGARKAW 10 2 + 55.851 0.0 0.0 5.0066 5.0066 75.256 0.0 0.0 0.0 31.75827868014004 7.513487579716767 7.513487579716767 2.455126678141504 0 1.0 0.0 0.4247425010840047 0.0 {[CP]|[EA]}VEGARKAW;{[CP]|[EA]}VEGAGVKAW;{[CP]|[EA]}VEQRKAW;{[CP]|[EA]}VEGQVKAW;{[CP]|[EA]}VEQGVKAW;{[CP]|[EA]}VWAGVKAW;{[CP]|[EA]}VWQVKAW;{NN|[MP]|[D{I|L}]|[EV]}AN[KA]W[W{I|L}];{[CP]|[EA]}VN[KA]W[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}[RV]EW[W{I|L}] 5.0066;4.7865;4.6909;4.6247;4.4669;3.8163;3.6584;3.5643;3.0751;2.8002 -;+;-;-;-;-;-;-;-;- + 2107 + 1 1.864 63037.2 1.0 3163 3410 6570 DOHH2_400M_050219_2,6575 DOHH2_400M_050219_2,6575,AEVEGAGVKAW False True AEVEGAGVKAW 35.324393 558.788378894329 2875443.0 6570.0 ENSG00000197070|ENST00000371421|ARRDC1;;ENST00000491911.5_1_9:140508423-140509541:+|nuORF 7.422623634338379 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6576 35.328 162.0 361500.0 25 0 27495.0 + 5621 DPCIYKFYEFY 11 69 744.3302669433846 1486.645980953569 2 744.3313476443291 MULTI CID FTMS 0 0 0 6570 257387.8125 0.1702540752282151 3 -0.2860107421875 6 Unmodified _DPCIYKFYEFY_ REV__ENSG00000163840|ENST00000296161|DTX3L 5.731851221503515 0.8481046878870278 2 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 63.549 0.0 0.0 4.2747 0.0 0.0 402.2010060041032 0.0 402.2010060041032 0.0 45.97872853154655 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.8494850021680094 DEAQQNA{M(Oxidation (M))|F}Y 4.2747 - 1128 1 1.864 48731.4 1.0 3164 3410 6570 DOHH2_400M_050219_2,6576 DOHH2_400M_050219_2,6576,DPCIYKFYEFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6577 35.331 157.0 293500.0 25 0 34151.0 + 125 AALDKATVL 9 74 451.2713292749145 900.528105616629 2 451.2711669802666 MULTI CID FTMS 0 0 0 6570 251965.421875 1.0 0 0.0 7 Unmodified _AALDKATVL_ ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4 26.88365393820708 0.1891292719743517 2 AAT{I|L}ATV 7 4 24.122 0.0 0.0 2.6787 0.0 0.0 0.0 270.1444745953977 270.1444745953977 7.668432240108771 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 AAT{I|L}ATV 2.6787 - 204 1 1.864 41613.4 1.0 3165 3410 6570 DOHH2_400M_050219_2,6577 DOHH2_400M_050219_2,6577,AALDKATVL False True AALDKATVL 35.330711 451.271166980267 1155451.25 6570.0 ENST00000489049.5_1_10:112647518-112650449:+|nuORF;;nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 0.9003183251867691 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6578 35.335 223.0 312090.0 25 0 32165.0 + 32901 SEINKPNFY 9 93 556.2745782313033 1110.5346035294065 2 556.2748290896416 MULTI CID FTMS 0 0 0 6570 250771.984375 0.0871230661764578 4 -0.3915023803710937 8 Unmodified _SEINKPNFY_ ENSG00000067334|ENST00000436063|DNTTIP2 34.10243960390752 0.1078313939113124 2 {[ES]|[DT]|[{I|L}C]}{I|L}NK[NP]{M(Oxidation (M))|F}Y 9 0 + 37.898 0.0 0.0 3.4126 3.4126 78.54 0.0 0.0 0.0 23.91827190205533 3.2741748770356978 3.2741748770356978 9.208187539523756 0 0.4247425010840047 0.0 0.0 0.3807196863200844 + + {[ES]|[DT]|[{I|L}C]}{I|L}NK[NP]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}GGK[NP]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}[EP]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}Y;EE[KG]K[NP]{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}{I|L}[TP][QP]W[PG] 3.4126;2.5834;2.277;0.99884;0.28051 +;-;-;-;- + 306 + 1 1.864 55532.3 1.0 3166 3410 6570 DOHH2_400M_050219_2,6578 DOHH2_400M_050219_2,6578,SEINKPNFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6579 35.341 327.0 262100.0 25 0 27818.0 -1 SQRAFCTMHFY 11 102 732.3127535720795 1462.6109542109589 2 732.3129150271416 MULTI CID FTMS 0 0 0 6570 216354.953125 0.0961399496893186 4 -0.3915023803710937 9 Carbamidomethyl (C),Oxidation (M) _SQRAFC(Carbamidomethyl (C))TM(Oxidation (M))HFY_ ENST00000277415.15_1_9:137989658-137989826:+|nuORF 5.731851221503515 0.8481046878870278 2 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y 12 -1 + 83.352 0.0 0.0 5.6988 5.6988 78.058 0.0 0.0 0.0 2.6202859707159547 10.629778129126294 2.6202859707159547 2.6202859707159547 0 0.8182503180159344 0.8239087409443188 0.9517188504113846 1.1549471895720984 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]N[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQQGGA{M(Oxidation (M))|F}Y 5.6988;5.5197;5.3941;5.3551;5.0768;5.0768;5.0768;4.8994;4.8994;4.8994 -;-;-;-;-;-;-;-;-;- 993 1 1.864 63305.0 1.0 3167 3410 6570 DOHH2_400M_050219_2,6579 DOHH2_400M_050219_2,6579,SQRAFCTMHFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6580 35.345 206.0 348580.0 25 0 89864.0 + 13482 HLVDEPQNLIK 11 84 435.9106126478497 1304.7100085437492 3 435.9099609255791 MULTI CID FTMS 0 0 0 6570 216937.90625 0.8243050801772336 -1 0.051788330078125 10 Unmodified _HLVDEPQNLIK_ CON__P02769 63.960520009940105 0.0530716371881472 2 [H{I|L}]VDE 5 6 41.682 0.0 0.0 3.1948 0.0 0.0 0.0 708.4060950346119 708.4060950346119 0.0514997831990626 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3494850021680094 0.0 + [H{I|L}]VDE 3.1948 + + 153 1 1.864 62826.7 1.0 3168 3410 6570 DOHH2_400M_050219_2,6580 DOHH2_400M_050219_2,6580,HLVDEPQNLIK True True HLVDEPQNLIK 35.344797 435.909960925579 26128248.125 6570.0 P02769 10.03741709391276 3.0 True 11.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 6581 35.355 561.0 145330.0 25 0 13788.0 39559 VAYYCRLY 8 127 525.7585991896497 1049.5026454460992 2 525.7597534060478 MULTI CID FTMS 0 0 0 6570 119211.5 0.0121085061261403 10 -1.0995140075683594 11 Unmodified _VAYYCRLY_ ENSG00000009844|ENST00000367630|VTA1 15.768221252438446 0.6779680726941459 2 {[VA]|[{I|L}G]}D{[QG]|[NA]}D{I|L}G{I|L}Y 10 6 + 40.768 0.0 0.0 3.8845 3.8845 71.36 0.0 0.0 0.0 2.8881769599827223 10.452490459521968 2.8881769599827223 2.8881769599827223 0 0.8182503180159344 1.3979400086720375 0.2742275032520141 0.0 {[VA]|[{I|L}G]}D{[QG]|[NA]}D{I|L}G{I|L}Y;[TP]S{[QG]|[NA]}D{I|L}G{I|L}Y;{[VA]|[{I|L}G]}D{[QG]|[NA]}DAV{I|L}Y;[TP]S{[QG]|[NA]}DAV{I|L}Y;{[VA]|[{I|L}G]}D{[QG]|[NA]}D{I|L}AVY;[TP]S{[QG]|[NA]}D{I|L}AVY;{[VA]|[{I|L}G]}D{[QG]|[NA]}DA{I|L}VY;{[MG]|[TS]}P{[QG]|[NA]}D{I|L}G{I|L}Y;[TP]S{[QG]|[NA]}DA{I|L}VY;{[CP]|[EA]}[RN]D{I|L}G{I|L}Y 3.8845;3.6093;3.3108;3.0356;2.8344;2.5592;2.2607;2.0543;1.9856;1.8115 -;-;-;-;-;-;-;-;-;- 602 1 1.864 66469.2 1.0 3169 3410 6570 DOHH2_400M_050219_2,6581 DOHH2_400M_050219_2,6581,VAYYCRLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6582 35.363 492.0 143440.0 25 0 19612.0 + 7005 EEIVKEVSTY 10 122 598.8063428399732 1195.5981327467464 2 598.8055908083916 MULTI CID FTMS 0 0 0 6570 96613.03125 1.0 0 0.0 12 Unmodified _EEIVKEVSTY_ ENSG00000156508|ENST00000309268|EEF1A1;ENST00000547505.2_1_12:44053979-44054081:+|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5 45.69961567697781 0.105390671673896 2 [KG]TD{[RE]|[WV]}GVATY 11 7 + 47.255 0.0 0.0 3.9524 3.9524 75.4 0.0 0.0 0.0 5.408719946578309 14.974801512857889 5.408719946578309 6.118198286171186 0 0.0 0.0 0.3054621874040891 0.0 [KG]TD{[RE]|[WV]}GVATY;[KG]T{[CP]|[EA]}{[TV]|[{I|L}S]}GVATY;[KG]TD{[RE]|[WV]}RATY;[KG]T{[CP]|[EA]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VATY;[KG]TD[VP][QT]STY;[KG]T{[CP]|[EA]}{[TV]|[{I|L}S]}RATY;[KG][WD]{[TV]|[{I|L}S]}GVATY;[KG][WD]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VATY;[KG][WD]{[TV]|[{I|L}S]}RATY;[KG]{I|L}{I|L}[C(Carbamidomethyl (C))D]GVATY 3.9524;3.4407;3.4024;3.1395;3.0574;2.8877;2.8877;2.5895;2.3377;2.2368 -;-;-;-;-;-;-;-;-;- 585 + 1 1.864 56794.3 1.0 3170 3410 6570 DOHH2_400M_050219_2,6582 DOHH2_400M_050219_2,6582,EEIVKEVSTY True True EEIVKEVSTY 35.363355 598.805590808392 573614.8125 6570.0 ENST00000547505.2_1_12:44053979-44054081:+|nuORF;;ENSG00000156508|ENST00000309268|EEF1A1;;nc|ENSG00000196205|Q5VTE0|EEF1A1P5 6.75801960627238 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6583 35.377 800.0 164270.0 25 0 20023.0 + 14411 IFKDHVSL 8 158 479.7715109926508 957.5284690521016 2 479.7704955935478 MULTI CID FTMS 0 0 0 6570 88438.84375 0.690314708596184 -1 0.051788330078125 13 Unmodified _IFKDHVSL_ ENSG00000198258|ENST00000586895|UBL5;ENST00000588141.1_1_19:9939136-9939570:+|nuORF;ENST00000589372.1_1_19:9939013-9939570:+|nuORF 41.8396318013385 0.2035142800366642 2 {I|L}{M(Oxidation (M))|F}KDHVS{I|L} 8 0 + 52.062 0.0 0.0 5.4371 5.4371 80.203 0.0 0.0 0.0 24.10529135980057 5.440680443502757 5.440680443502757 5.440680443502757 0 1.048455006504028 0.7695510786217261 0.3807196863200844 0.0 + + {I|L}{M(Oxidation (M))|F}KDHVS{I|L};{I|L}{M(Oxidation (M))|F}KDHVTV;{I|L}{M(Oxidation (M))|F}V[SG]HVS{I|L};{I|L}{M(Oxidation (M))|F}V[SG]HVTV;{I|L}{M(Oxidation (M))|F}VQQQPV;{I|L}{M(Oxidation (M))|F}VQ[HT]T{I|L};{I|L}{M(Oxidation (M))|F}VQQQVP;[{M(Oxidation (M))|F}V]{I|L}Q[HT]T{I|L};{I|L}{M(Oxidation (M))|F}V[AG]QQPV;{I|L}{M(Oxidation (M))|F}V{[DS]|[MA]|[CV]|TT}[{I|L}P]AP 5.4371;4.8689;4.0542;3.486;2.314;2.2588;1.7744;1.6773;1.3467;1.3438 +;-;-;-;-;-;-;-;-;- + 774 + 1 1.864 103041.3 0.4600000083446502 3171 3410 6570 DOHH2_400M_050219_2,6583 DOHH2_400M_050219_2,6583,IFKDHVSL False True IFKDHVSL 35.377169 479.770495593548 627982.625 6570.0 ENST00000589372.1_1_19:9939013-9939570:+|nuORF;;ENSG00000198258|ENST00000586895|UBL5;;ENST00000588141.1_1_19:9939136-9939570:+|nuORF 4.477248350779216 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6585 35.383 80.0 586610.0 25 0 60640.0 + 23362 LTDITKGVQY 10 87 569.3108407004488 1136.6071284676975 2 569.3112670779228 MULTI CID FTMS 0 0 0 6584 471956.34375 0.2313245153943366 2 -0.2192039489746093 1 Unmodified _LTDITKGVQY_ ENSG00000167658|ENST00000309311|EEF2 41.95555342248728 0.1369168616057562 2 {I|L}TD{I|L}TP 6 5 63.933 0.0 0.0 5.6249 0.0 0.0 0.0 493.2419832818969 493.2419832818969 48.44843468456581 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 {I|L}TD{I|L}TP 5.6249 - 527 + 1 1.875 41618.5 1.0 3172 3411 6584 DOHH2_400M_050219_2,6585 DOHH2_400M_050219_2,6585,LTDITKGVQY False True LTDITKGVQY 35.382861 569.311267077923 38128644.0 6584.0 ENSG00000167658|ENST00000309311|EEF2 7.582050323486328 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6586 35.397 800.0 124810.0 25 0 7851.5 -1 0 81 910.9155704039888 1819.8165878747773 2 910.9195434451104 MULTI CID FTMS 0 0 0 6584 96354.0 0.2340329716847192 5 -0.5937919616699219 2 2 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEE[{I|L}V]K[C(Carbamidomethyl (C))C]{I|L}Q 15 -1 + 67.361 0.0 0.0 3.7015 3.7015 82.809 0.0 0.0 0.0 47.41266962787186 8.486254621213938 8.486254621213938 22.73764288229892 0 1.0 0.0 0.0 1.1989700043360187 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEE[{I|L}V]K[C(Carbamidomethyl (C))C]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEE[RK]{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}Y 3.7015;2.4521 -;- 310 + 1 1.875 70472.5 0.5899999737739563 3173 3411 6584 DOHH2_400M_050219_2,6586 DOHH2_400M_050219_2,6586, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6587 35.399 81.0 1446400.0 25 0 191100.0 + 5738 DPMKARVVL 9 94 514.7993252422002 1027.5840975512003 2 514.7997314333916 MULTI CID FTMS 0 0 0 6584 732613.1875 0.1079090707165079 -2 0.1185951232910156 3 Unmodified _DPMKARVVL_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 66.45667989310934 0.0225072657982126 2 DPMKARVV{I|L} 9 0 + 74.491 0.0 0.0 7.2491 7.2491 96.56 0.0 0.0 0.0 42.64457166900067 11.30297358392653 11.30297358392653 56.82258126592544 0 1.8539171939081167 2.0 0.0 0.0 + + DPMKARVV{I|L};D{I|L}[WQ]RVV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]DRVV{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PA]DRVV{I|L};[{M(Oxidation (M))|F}V][QP]ARVV{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[QV]|[N{I|L}]|[RA]|[KV]}[DP]VV{I|L};{[CP]|[EA]}{[QV]|[N{I|L}]|[RA]|[KV]}DRVV{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[QV]|[N{I|L}]|[RA]|[KV]}VVPD{I|L};{[CP]|[EA]}[WK][{I|L}A]VV{I|L};[H{I|L}][HV][DP]VV{I|L} 7.2491;1.7194;1.4719;1.2769;1.2053;0.83869;0.62587;0.38204;0.29386;0.077113 +;-;-;-;-;-;-;-;-;- + 182 + 1 1.875 95774.3 1.0 3174 3411 6584 DOHH2_400M_050219_2,6587 DOHH2_400M_050219_2,6587,DPMKARVVL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6588 35.402 171.0 348720.0 25 0 40579.0 + 42371 VTDKFTESVY 10 105 594.7929986573082 1187.5714443814163 2 594.7935058474541 MULTI CID FTMS 0 0 0 6584 321115.46875 0.3709799236717561 -1 0.0668067932128906 4 Unmodified _VTDKFTESVY_ ENSG00000254901|ENST00000462790|BORCS8;ENST00000591398.1_1_19:19293380-19297824:-|nuORF;ENST00000602438.1_1_19:19260194-19302926:-|nuORF;nc|ENSG00000254901|Q96FH0-2|BORCS8 71.70789743142352 0.0188816056000227 2 {[TV]|[{I|L}S]}DK{M(Oxidation (M))|F}TESVY 10 0 + 83.924 0.0 0.0 7.0669 7.0669 82.549 0.0 0.0 0.0 12.345916506418462 15.026975159433531 12.345916506418462 2.6979531151190628 0 0.8807196863200843 1.154901959985743 2.0994850021680094 0.0 + + {[TV]|[{I|L}S]}DK{M(Oxidation (M))|F}TESVY;{[TV]|[{I|L}S]}DK{M(Oxidation (M))|F}TDTVY;[VS]EK{M(Oxidation (M))|F}TESVY;{[TV]|[{I|L}S]}[SG]V{M(Oxidation (M))|F}TESVY;[VS]EK{M(Oxidation (M))|F}TDTVY;{[TV]|[{I|L}S]}[SG]T{M(Oxidation (M))|F}VESVY;{[TV]|[{I|L}S]}DK{M(Oxidation (M))|F}MWVY;[VS]GTV{M(Oxidation (M))|F}TESVY;{[TV]|[{I|L}S]}[SG]T{M(Oxidation (M))|F}D{I|L}SVY;{[TV]|[{I|L}S]}[SG]V{M(Oxidation (M))|F}TDTVY 7.0669;6.8397;6.0273;5.8811;5.8001;5.7533;5.7156;5.7135;5.7092;5.654 +;-;-;-;-;-;-;-;-;- + 3167 1 1.875 53250.9 1.0 3175 3411 6584 DOHH2_400M_050219_2,6588 DOHH2_400M_050219_2,6588,VTDKFTESVY True True VTDKFTESVY 35.401909 594.793505847454 4470925.0 6584.0 ENST00000602438.1_1_19:19260194-19302926:-|nuORF;;nc|ENSG00000254901|Q96FH0-2|BORCS8;;ENST00000591398.1_1_19:19293380-19297824:-|nuORF;;ENSG00000254901|ENST00000462790|BORCS8 6.492228190104167 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6589 35.409 377.0 345010.0 25 0 22997.0 + 698 AENLPEQEI 9 139 521.7556723881436 0 521.7560912966728 PEAK CID FTMS 0 0 0 6584 174811.59375 1.0 0 0.0 5 Unmodified _AENLPEQEI_ ENSG00000197102|ENST00000360184|DYNC1H1 34.93206674587334 0.0866320009191956 2 {I|L}N 2 8 10.573 0.0 0.0 1.0152 0.0 0.0 614.2893771475777 197.0571230524047 811.3465001999824 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}N 1.0152 - 157 + 1 1.875 103450.2 1.0 3176 3411 6584 DOHH2_400M_050219_2,6589 DOHH2_400M_050219_2,6589,AENLPEQEI True True AENLPEQEI 35.408684 521.756091296673 885706.3125 6584.0 ENSG00000197102|ENST00000360184|DYNC1H1 5.228050231933594 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6590 35.411 102.0 661220.0 25 0 61342.0 8511 ETDRRILM 8 106 517.2778210491226 1032.5410891650452 2 517.2802001833916 MULTI CID FTMS 0 0 0 6584 182682.890625 0.4589238646823426 -1 0.0668067932128906 6 Unmodified _ETDRRILM_ ENST00000409843.5_1_2:189156812-189248555:+|nuORF;ENST00000409927.5_2_2:189156919-189248555:+|nuORF 23.1484247019978 0.5573009939494978 2 {[ET]|[MV]}A[RD]VV{I|L}M 9 3 + 38.412 0.0 0.0 3.7201 3.7201 67.99 0.0 0.0 0.0 0.5411342943241308 10.453030950225552 0.5411342943241308 0.5411342943241308 0 0.5 0.0 0.8851518780601924 0.0 {[ET]|[MV]}A[RD]VV{I|L}M;{[CP]|[EA]}T[RD]VV{I|L}M;{[ET]|[MV]}[WR]VV{I|L}M;[TA]E[RD]VV{I|L}M;[YV]VV[RD]ADP;[YV]VV[WR]DP;[YV]VV[RD]EGP 3.7201;3.6677;3.6482;3.4866;2.3497;2.2778;2.0058 -;-;-;-;-;-;- 247 1 1.875 55385.6 1.0 3177 3411 6584 DOHH2_400M_050219_2,6590 DOHH2_400M_050219_2,6590,ETDRRILM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6591 35.425 800.0 124210.0 25 0 4829.3 -1 FPFFCWIWVWF 11 129 817.8838109141685 1633.753068895137 2 817.8836547732353 MULTI CID FTMS 0 0 0 6584 121213.1875 1.0 0 0.0 7 Carbamidomethyl (C) _FPFFC(Carbamidomethyl (C))WIWVWF_ L1PB1_dup6616|chr8:82292382-82293007:-|1.773853938787453|0.0196351871970747|6.5|48.0|39|3|anti-sense 1.4819007175156935 0.86815623132643 2 QDAN{I|L}NPE 8 -1 89.303 0.0 0.0 5.4661 0.0 0.0 734.3707752912125 0.0 734.3707752912125 0.0 59.125853418640375 0.0 0.0 0 2.086696871556164 0.0 0.0 1.1549471895720984 QDAN{I|L}NPE 5.4661 - 1061 1 1.875 69273.4 0.6200000047683716 3178 3411 6584 DOHH2_400M_050219_2,6591 DOHH2_400M_050219_2,6591,FPFFCWIWVWF False False False False ERV PXD020620_cell_line DOHH2_400M_050219_2 6592 35.439 800.0 191260.0 25 0 49528.0 + 30527 RELEEMRVTY 10 123 663.3294990990948 1324.6444452649896 2 663.3295776247978 MULTI CID FTMS 0 0 0 6584 88823.421875 0.895606177095215 -1 0.0668067932128906 8 Unmodified _RELEEMRVTY_ ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 39.92294525591503 0.1583807461695373 2 [VG]E{I|L}EE{M(Oxidation (M))|F}HVTY 11 3 HVTY + + 50.027 19.112 3.6879 3.7766 3.7766 51.025 0.0 0.0 0.0 27.578563137472614 0.0 0.0 0.0 0 1.610924374808178 1.5228787452803376 0.0 0.0 [VG]E{I|L}EE{M(Oxidation (M))|F}HVTY 3.7766 - 299 + 1 1.875 116285.7 0.6100000143051147 3179 3411 6584 DOHH2_400M_050219_2,6592 DOHH2_400M_050219_2,6592,RELEEMRVTY False True RELEEMRVTY 35.438559 663.329577624798 610451.75 6584.0 nc|ENSG00000127914|Q99996-5|AKAP9;;nc|ENSG00000127914|Q99996-6|AKAP9;;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;;nc|ENSG00000127914|Q99996-4|AKAP9;;ENSG00000127914|ENST00000356239|AKAP9;;nc|ENSG00000127914|Q99996-3|AKAP9;;nc|ENSG00000127914|Q99996-1|AKAP9 6.49946657816569 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6593 35.452 800.0 324920.0 25 0 68117.0 + 31438 RPQEQLHNQY 10 132 656.8239580330244 1311.633363132849 2 656.8224975466728 MULTI CID FTMS 0 0 0 6584 88704.8203125 0.1523304340033025 -3 0.2230224609375 9 Unmodified _RPQEQLHNQY_ REV__ENSG00000132382|ENST00000254718|MYBBP1A;REV__nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 13.042465956692816 0.6287021003332052 2 [RP]AYS{I|L}WWAY 10 -1 + 41.52 0.0 0.0 3.1655 3.1655 79.517 0.0 0.0 0.0 6.204613152818368 22.91956270212445 6.204613152818368 13.512418347160663 0 0.9731975075880328 0.0 0.0 0.2614393726401688 [RP]AYS{I|L}WWAY;{[CP]|[EA]}D{I|L}[{M(Oxidation (M))|F}V]EKKAY;[PA]RYS{I|L}WWAY;{[ET]|[MV]}[K{I|L}]C{I|L}WWAY;[RP]A[{I|L}A]E[{M(Oxidation (M))|F}V]{I|L}[C(Carbamidomethyl (C))H];{[TV]|[{I|L}S]}{[WT]|[RM]}S{I|L}WWAY;[RP]A{M(Oxidation (M))|F}[EP][VS]{I|L}[C(Carbamidomethyl (C))H];[PA]R[{I|L}A]E[{M(Oxidation (M))|F}V]{I|L}[C(Carbamidomethyl (C))H] 3.1655;2.1353;1.9581;1.5323;1.2533;1.2332;0.74115;0.045872 -;-;-;-;-;-;-;- 851 1 1.875 187054.5 0.6000000238418579 3180 3411 6584 DOHH2_400M_050219_2,6593 DOHH2_400M_050219_2,6593,RPQEQLHNQY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6594 35.459 251.0 216150.0 25 0 21269.0 + 10932 GAKRHSGL 8 103 413.238996635502 824.463440337804 2 413.2390319705009 MULTI CID FTMS 0 0 0 6584 100369.8046875 0.2116967834989766 -25 2.35159683227539 10 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 5.230669730166228 0.792582437072536 2 Y 1 -1 10.969 0.0 0.0 1.3305 0.0 0.0 643.3895247878024 0.0 643.3895247878024 0.0 1.6367946719316515 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3305 - 8 + 1 1.875 46976.0 1.0 3181 3411 6584 DOHH2_400M_050219_2,6594 DOHH2_400M_050219_2,6594,GAKRHSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6595 35.472 800.0 128210.0 25 0 12808.0 -1 0 42 896.9513899760849 6271.608794566394 7 897.7420532107353 MULTI CID FTMS 0 0 0 6584 65596.34375 0.0922538080989224 28 -2.4368972778320312 11 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.875 74179.5 0.4099999964237213 3182 3411 6584 DOHH2_400M_050219_2,6595 DOHH2_400M_050219_2,6595, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6596 35.475 158.0 405900.0 25 0 31510.0 + 341 AEAPGDPQW 9 89 485.71668843794487 969.4188239426898 2 485.7167236208916 MULTI CID FTMS 0 0 0 6584 94033.5546875 0.37808133763884 -1 0.0668067932128906 12 Unmodified _AEAPGDPQW_ ENSG00000175463|ENST00000542590|TBC1D10C;ENST00000529132.1_1_11:67172517-67173239:+|nuORF;ENST00000530967.6_1_11:67171601-67174164:+|nuORF;nc|ENSG00000175463|Q8IV04-2|TBC1D10C 25.399314129420983 0.2080152500878129 2 [QP]D 3 7 15.406 0.0 0.0 1.5892 0.0 0.0 0.0 626.2570862320053 626.2570862320053 1.426675035687312 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [QP]D 1.5892 - 181 1 1.875 56387.0 1.0 3183 3411 6584 DOHH2_400M_050219_2,6596 DOHH2_400M_050219_2,6596,AEAPGDPQW False True AEAPGDPQW 35.475481 485.716723620892 2093108.125 6584.0 ENST00000530967.6_1_11:67171601-67174164:+|nuORF;;nc|ENSG00000175463|Q8IV04-2|TBC1D10C;;ENST00000529132.1_1_11:67172517-67173239:+|nuORF;;ENSG00000175463|ENST00000542590|TBC1D10C;;chr11:67405184-67405595|27|31.59|0.58|5.78|+|0|TBC1D10C,TBC1D10C|1 6.127416133880615 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6598 35.48 20.0 1652700.0 25 0 135440.0 + 26392 NTDLMTSQCY 10 72 588.2384720304343 1174.4623911276683 2 588.2393066287041 MULTI CID FTMS 0 0 0 6597 2153924.25 0.464793261684896 1 -0.1208839416503906 1 Unmodified _NTDLMTSQCY_ REV__ENSG00000197121|ENST00000354764|PGAP1;REV__ENST00000470179.5_1_2:197712669-197791463:-|nuORF;REV__nc|ENSG00000197121|Q75T13-2|PGAP1;REV__nc|ENSG00000197121|Q75T13-3|PGAP1;REV__nc|ENSG00000197121|Q75T13-4|PGAP1 19.256988751693697 0.5244284437930726 2 [NS]E{I|L} 4 -1 41.833 0.0 0.0 3.5618 0.0 0.0 0.0 728.2363528798747 728.2363528798747 20.150064313529 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.055462187404089 0.8882104921644451 [NS]E{I|L} 3.5618 - 89 1 1.883 31916.6 1.0 3184 3412 6597 DOHH2_400M_050219_2,6598 DOHH2_400M_050219_2,6598,NTDLMTSQCY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6599 35.483 111.0 504790.0 25 0 36162.0 + 31650 RRGDFIHVM 9 84 377.53402590558005 1129.5802483169402 3 377.5341674685478 MULTI CID FTMS 0 0 0 6597 283868.25 0.1515743078175624 2 -0.2263755798339843 2 Unmodified _RRGDFIHVM_ ENSG00000177885|ENST00000316804|GRB2;ENST00000462266.1_1_17:73316451-73322393:-|nuORF;nc|ENSG00000177885|P62993-2|GRB2 13.614867670302877 0.4681447649821485 2 {I|L}HVM 4 5 21.555 0.0 0.0 1.9082 0.0 0.0 631.319885086705 0.0 631.319885086705 0.0 6.9504625720438895 0.0 0.0 0 0.535666875892183 0.0 0.0 0.0 + {I|L}HVM 1.9082 + + 37 1 1.883 50395.7 1.0 3185 3412 6597 DOHH2_400M_050219_2,6599 DOHH2_400M_050219_2,6599,RRGDFIHVM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6600 35.484 45.0 1125600.0 25 0 86813.0 -1 0 71 881.9126736032672 1761.8107942733343 2 881.9127685427666 MULTI CID FTMS 0 0 0 6597 1188895.25 1.0 0 0.0 3 2 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NE[RV]R[C(Carbamidomethyl (C))C]{I|L}Q 14 -1 + 59.267 0.0 0.0 3.364 3.364 67.382 0.0 0.0 0.0 40.01480104239079 2.306679035102164 2.306679035102164 0.796896906561031 0 0.8807196863200843 0.0 0.3807196863200844 0.7302046884880937 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NE[RV]R[C(Carbamidomethyl (C))C]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NQ[KQ]R[C(Carbamidomethyl (C))C]{I|L}Q;[NP]{I|L}N[HC][{I|L}A]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[{I|L}A][YV]P[WD];[NP]{I|L}NE[HQ]{[ET]|[MV]}N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HC][RV]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HC][KQ]QN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NQ[KQ][YV]P[WD];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NE[RV][YV]P[WD] 3.364;3.3188;3.1906;2.9477;2.8098;2.8098;2.7646;2.7389;2.568 -;-;-;-;-;-;-;-;- 571 + 1 1.883 41889.0 1.0 3186 3412 6597 DOHH2_400M_050219_2,6600 DOHH2_400M_050219_2,6600, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6601 35.486 128.0 510580.0 25 0 65024.0 + 37220 TIKEKQYIL 9 86 568.3392147038784 1134.663876474557 2 568.3396484255791 MULTI CID FTMS 0 0 0 6597 376335.21875 1.0 0 0.0 4 Unmodified _TIKEKQYIL_ ENSG00000102897|ENST00000567954|LYRM1 32.30548876998284 0.1201446275138228 2 [{I|L}T][KC]CK{I|L}T 8 5 50.283 0.0 0.0 4.4315 0.0 0.0 0.0 241.15439096113792 241.15439096113792 36.787975944830364 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.2614393726401688 0.7302046884880937 [{I|L}T][KC]CK{I|L}T 4.4315 - 349 1 1.883 55571.1 1.0 3187 3412 6597 DOHH2_400M_050219_2,6601 DOHH2_400M_050219_2,6601,TIKEKQYIL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6602 35.49 170.0 321990.0 25 0 34714.0 + 910 AEYNSDLHQF 10 82 612.2695708609551 1222.5245887887102 2 612.2700683474541 MULTI CID FTMS 0 0 0 6597 310196.28125 0.214463649073252 2 -0.2263755798339843 5 Unmodified _AEYNSDLHQF_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 40.23920728925047 0.1550410903091231 2 {[CP]|[EA]}YNSD{I|L}H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 10 0 + 57.541 0.0 0.0 4.7067 4.7067 81.359 0.0 0.0 0.0 38.533883393774616 6.829759131723421 6.829759131723421 9.164539485499256 0 0.4247425010840047 0.8538719643217619 0.0 1.110924374808178 + + {[CP]|[EA]}YNSD{I|L}H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[CP]|[EA]}YGGSD{I|L}H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[CP]|[EA]}YNS[YK]WY;{[CP]|[EA]}YGGS[YK]WY;{[CP]|[EA]}YN[WP][KG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[CP]|[EA]}Y{[SA]|[TG]}[RD]H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[CP]|[EA]}YN[WP]PT[{M(Oxidation (M))|F}V];{[CP]|[EA]}Y{[YC]|[HE]}{I|L}{I|L}WY;{[CP]|[EA]}Y{[SA]|[TG]}Y[{I|L}P]{M(Oxidation (M))|F}Y;{[CP]|[EA]}[RH]S{[{M(Oxidation (M))|F}D]|MM}Y[QA] 4.7067;3.9571;3.7785;3.0253;2.9241;2.1964;2.1435;1.7299;1.3022;1.0747 +;-;-;-;-;-;-;-;-;- + 592 + 1 1.883 47971.7 1.0 3188 3412 6597 DOHH2_400M_050219_2,6602 DOHH2_400M_050219_2,6602,AEYNSDLHQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6603 35.493 190.0 458250.0 25 0 38466.0 19774 LGRPPLVFP 9 90 498.3037451951599 994.5929374571198 2 498.3037597537041 MULTI CID FTMS 0 0 0 6597 270372.125 1.0 0 0.0 6 Unmodified _LGRPPLVFP_ ENST00000349606.4_1_6:16129553-16141990:+|nuORF 4.75600775471527 0.7486543447549536 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[R{I|L}]KNP 7 5 19.116 0.0 0.0 1.9219 0.0 0.0 0.0 123.09362804082846 123.09362804082846 8.278069088200235 0.0 0.0 0.0 0 0.6139829889124311 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[R{I|L}]KNP 1.9219 - 27 1 1.883 74120.6 1.0 3189 3412 6597 DOHH2_400M_050219_2,6603 DOHH2_400M_050219_2,6603,LGRPPLVFP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6604 35.497 199.0 286700.0 25 0 20136.0 + 4900 DGKLKVTL 8 95 437.274491345864 872.5344297585281 2 437.2743713259697 MULTI CID FTMS 0 0 0 6597 250626.03125 1.0 0 0.0 7 Unmodified _DGKLKVTL_ ENSG00000172009|ENST00000307741|THOP1 27.628801355627647 0.4629596117395134 2 DGK 3 5 25.177 0.0 0.0 2.8855 0.0 0.0 0.0 569.3682374930204 569.3682374930204 5.766062568876716 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + DGK 2.8855 + + 158 + 1 1.883 47152.6 1.0 3190 3412 6597 DOHH2_400M_050219_2,6604 DOHH2_400M_050219_2,6604,DGKLKVTL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6605 35.504 382.0 281090.0 25 0 10859.0 + + -1 SEVDVSDLGSRNY 13 111 721.3808240038575 1440.7470950745148 2 721.3807861208916 MULTI CID FTMS 0 0 0 6597 223293.671875 0.8748316012243533 -1 0.0983200073242187 8 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))HRM(Oxidation (M))WRSLWVL_ ENST00000527295.5_1_11:405898-406649:-|nuORF;ENSG00000185187|ENST00000431843|SIGIRR 11.494710602746466 0.654671931888957 2 {[SA]|[TG]}NQ{I|L}{I|L}PSQSANV{I|L} 14 -1 + 84.572 0.0 0.0 5.87 5.87 75.895 0.0 0.0 0.0 10.431372718143663 61.10286604363769 10.431372718143663 0.479013323091948 0 0.3252574989159953 1.0457574905606752 2.1791746928241125 0.0 {[SA]|[TG]}NQ{I|L}{I|L}PSQSANV{I|L};{[SA]|[TG]}GGQ{I|L}{I|L}PSQSANV{I|L};{[SA]|[TG]}NV[HS]{I|L}{[ET]|[MV]}SANV{I|L};{[SA]|[TG]}GP[WK]PSQSANV{I|L};{[SA]|[TG]}GGV[HS]{I|L}{[ET]|[MV]}SANV{I|L};{[SA]|[TG]}GK[WP]PSQSANV{I|L};{[SA]|[TG]}GP[WP]KSQSANV{I|L};{[SA]|[TG]}NQ{I|L}{I|L}PSQSAGGV{I|L};{[SA]|[TG]}N[AG]{I|L}{I|L}PSQSANV{I|L};{[SA]|[TG]}NQ{I|L}{I|L}PS[AG]SANV{I|L} 5.87;5.8368;5.774;5.7567;5.7408;5.6681;5.3742;5.2419;5.2419;5.2419 -;-;-;-;-;-;-;-;-;- 3156 1 1.883 81418.7 1.0 3191 3412 6597 DOHH2_400M_050219_2,6605 DOHH2_400M_050219_2,6605,HRMWRSLWVL False False SEVDVSDLGSRNY 35.50415 721.380786120892 453477.96875 6597.0 ENST00000527295.5_1_11:405898-406649:-|nuORF;;ENSG00000185187|ENST00000431843|SIGIRR 4.75126322110494 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6606 35.507 129.0 567800.0 25 0 47985.0 + 36685 TDAALVVSLG 10 94 473.26591074835903 944.517268563518 2 473.2661010622978 MULTI CID FTMS 0 0 0 6597 226584.75 1.0 0 0.0 9 Unmodified _TDAALVVSLG_ REV__ENST00000341287.8_1_2:209051722-209051767:-|nuORF 18.1463463914782 0.5430639438673815 2 {[ES]|[DT]|[{I|L}C]}AP 4 -1 25.445 0.0 0.0 2.694 0.0 0.0 0.0 557.3306368463499 557.3306368463499 14.731975075880328 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}AP 2.694 - 113 + 1 1.883 62778.9 1.0 3192 3412 6597 DOHH2_400M_050219_2,6606 DOHH2_400M_050219_2,6606,TDAALVVSLG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6607 35.51 181.0 329220.0 25 0 31892.0 + 44832 YPNSKQLL 8 91 481.76999897468295 961.525445016166 2 481.7690002322197 MULTI CID FTMS 0 0 0 6597 206132.40625 1.0 0 0.0 10 Unmodified _YPNSKQLL_ ENSG00000163608|ENST00000314400|NEPRO;ENST00000472637.5_1_3:112724385-112732818:-|nuORF;ENST00000474311.1_1_3:112724385-112727343:-|nuORF;nc|ENSG00000163608|Q6NW34-2|NEPRO 26.88365393820708 0.4786498634179528 2 YPNS[KQ]{I|L}{I|L} 8 0 + 48.836 0.0 0.0 5.079 5.079 84.668 0.0 0.0 0.0 31.40092514408778 3.900925144087779 3.900925144087779 9.262137858390808 0 0.3252574989159953 2.0 0.0 0.0 + + YPNS[KQ]{I|L}{I|L};YPGGS[KQ]{I|L}{I|L};YPKK[WQ]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KG]KK{[QN]|[E{I|L}]|[KN]} 5.079;4.1157;3.5023;0.3259 +;-;-;- + 176 + 1 1.883 55049.7 1.0 3193 3412 6597 DOHH2_400M_050219_2,6607 DOHH2_400M_050219_2,6607,YPNSKQLL False True YPNSKQLL 35.510281 481.76900023222 1372373.25 6597.0 ENSG00000163608|ENST00000314400|NEPRO;;ENST00000474311.1_1_3:112724385-112727343:-|nuORF;;ENST00000472637.5_1_3:112724385-112732818:-|nuORF;;nc|ENSG00000163608|Q6NW34-2|NEPRO 2.892531394958496 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6608 35.518 405.0 234660.0 25 0 12413.0 + -1 ELDPMAMTQKY 11 107 671.8043409657508 1341.5941289983016 2 671.8047973513603 MULTI CID FTMS 0 0 0 6597 171253.078125 0.6463015938124104 -1 0.0983200073242187 11 Oxidation (M) _ELDPMAM(Oxidation (M))TQKY_ ENST00000534765.1_1_11:65835264-65836005:+|nuORF;ENSG00000087365|ENST00000322535|SF3B2 39.21299971606389 0.2245192836502623 2 {[QN]|[E{I|L}]|[KN]}DPMA{M(Oxidation (M))|F}TQKY 11 -1 + 75.455 0.0 0.0 5.6243 5.6243 77.48 0.0 0.0 0.0 49.31679632733531 13.565473235138114 13.565473235138114 2.340832060333682 0 0.3054621874040891 2.0 0.3252574989159953 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}DPMA{M(Oxidation (M))|F}TQKY;{[QN]|[E{I|L}]|[KN]}DPMSMTQKY;{[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}AMTQKY;{[QN]|[E{I|L}]|[KN]}DPMA{M(Oxidation (M))|F}T[AG]KY;{[QN]|[E{I|L}]|[KN]}DPMSMT[AG]KY;{[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}AMT[AG]KY;{[QN]|[E{I|L}]|[KN]}DPMAN[YV]KY;{[QN]|[E{I|L}]|[KN]}D[WE]MTQKY;{[QN]|[E{I|L}]|[KN]}DPMA{M(Oxidation (M))|F}[KA]{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}DPMS[VS]{[CA]|SS}KY 5.6243;5.4498;5.2254;4.9439;4.7694;4.545;4.374;4.0108;3.852;3.7615 +;-;+;-;-;-;-;-;-;- + 2034 + 1 1.883 75720.9 1.0 3194 3412 6597 DOHH2_400M_050219_2,6608 DOHH2_400M_050219_2,6608,ELDPMAMTQKY False False ELDPMAMTQKY 35.517531 671.80479735136 3586245.0 6597.0 ENST00000534765.1_1_11:65835264-65836005:+|nuORF;;ENSG00000087365|ENST00000322535|SF3B2 6.598122755686442 2.0 True 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6609 35.531 800.0 175690.0 25 0 15604.0 -1 RENEYCPCKSH 11 110 761.3152861989566 1520.6160194647132 2 761.8171874880791 MULTI CID FTMS 0 0 0 6597 170184.296875 1.0 0 0.0 12 Acetyl (Protein N-term),2 Carbamidomethyl (C) _(Acetyl (Protein N-term))RENEYC(Carbamidomethyl (C))PC(Carbamidomethyl (C))KSH_ ENST00000423113.5_1_10:33190430-33190511:-|nuORF 14.40537977576856 0.7354982482299568 2 [HD][PS]DEAQQNA{M(Oxidation (M))|F}Y 13 -1 + 85.508 0.0 0.0 5.6233 5.6233 84.464 0.0 0.0 0.0 5.716626904712001 41.742311264076406 5.716626904712001 9.072459467631006 0 1.274227503252014 0.958607314841775 0.6109243748081782 1.5356668758921828 [HD][PS]DEAQQNA{M(Oxidation (M))|F}Y;[HD][PS]DEAQQGGA{M(Oxidation (M))|F}Y;[HD][PS]DEAQ[AG]NA{M(Oxidation (M))|F}Y;[HD][PS]DEA[AG]QNA{M(Oxidation (M))|F}Y;[HS][DP]DEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}ACY[DN]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGA{[CP]|[EA]}DHNNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQ{[CP]|[EA]}DHNNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG[RD]DHNNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}ACYM[EP]QNA{M(Oxidation (M))|F}Y 5.6233;5.0266;5.0266;4.8257;4.8197;4.7017;4.6192;4.3885;4.2958;4.2739 -;-;-;-;-;-;-;-;-;- 9715 1 1.883 102194.8 0.7300000190734863 3195 3412 6597 DOHH2_400M_050219_2,6609 DOHH2_400M_050219_2,6609,RENEYCPCKSH False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6610 35.539 452.0 174080.0 25 0 17081.0 -1 NWNCKMNQFY 10 97 710.7921899293232 1419.5698269254465 2 710.7917358279228 MULTI CID FTMS 0 0 0 6597 148669.171875 0.703345761675216 1 -0.1208839416503906 13 Carbamidomethyl (C),Oxidation (M) _NWNC(Carbamidomethyl (C))KM(Oxidation (M))NQFY_ ENST00000244230.6_1_2:71360149-71360302:+|nuORF 7.289230182591677 0.6929195370588109 2 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y 12 -1 + 69.09 0.0 0.0 4.867 4.867 79.626 0.0 0.0 0.0 2.4865124202832334 52.10077508221467 2.4865124202832334 6.61181443446619 0 0.8935078169319297 0.0 0.3054621874040891 1.1237125054200234 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]A[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQQGGA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}[EC]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Q[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQGGA{M(Oxidation (M))|F}Y;[AG]{[CA]|SS}S[CS]AQQNA{M(Oxidation (M))|F}Y 4.867;4.4012;4.2261;4.2261;4.2261;4.1814;3.7582;3.7582;3.7582;3.7581 -;-;-;-;-;-;-;-;-;- 564 1 1.883 61169.2 1.0 3196 3412 6597 DOHH2_400M_050219_2,6610 DOHH2_400M_050219_2,6610,NWNCKMNQFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6611 35.553 800.0 278570.0 25 0 34282.0 + 3442 CCQSDVSIFS 10 206 544.7226733238467 1087.4307937144931 2 544.7227661013603 MULTI CID FTMS 0 0 0 6597 135586.40625 0.5151073900959631 -1 0.0983200073242187 14 Unmodified _CCQSDVSIFS_ REV__ENST00000339437.10_1_3:3171710-3171836:+|nuORF 21.53697664764585 0.484802182336468 2 {NN|[MP]|[D{I|L}]|[EV]}SC(Carbamidomethyl (C))C(Carbamidomethyl (C))S{I|L}AY 9 -1 + 62.468 0.0 0.0 5.7446 5.7446 81.098 0.0 0.0 0.0 2.0441610022969385 38.86243079410804 2.0441610022969385 4.800960605445894 0 1.0 1.3979400086720375 0.850576203518622 1.110924374808178 {NN|[MP]|[D{I|L}]|[EV]}SC(Carbamidomethyl (C))C(Carbamidomethyl (C))S{I|L}AY;{[TV]|[{I|L}S]}DC(Carbamidomethyl (C))C(Carbamidomethyl (C))S{I|L}AY;{[TV]|[{I|L}S]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))DS{I|L}AY;{[TV]|[{I|L}S]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))SD{I|L}AY;{NN|[MP]|[D{I|L}]|[EV]}SC(Carbamidomethyl (C))C(Carbamidomethyl (C))A{[TV]|[{I|L}S]}Y;{[TV]|[{I|L}S]}DC(Carbamidomethyl (C))C(Carbamidomethyl (C))A{[TV]|[{I|L}S]}Y;{[ES]|[DT]|[{I|L}C]}VC(Carbamidomethyl (C))C(Carbamidomethyl (C))S{I|L}AY;{[TV]|[{I|L}S]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))DA{[TV]|[{I|L}S]}Y;{[TV]|[{I|L}S]}DAC(Carbamidomethyl (C))C(Carbamidomethyl (C)){[TV]|[{I|L}S]}Y;{NN|[MP]|[D{I|L}]|[EV]}SAC(Carbamidomethyl (C))C(Carbamidomethyl (C)){[TV]|[{I|L}S]}Y 5.7446;5.3031;4.8643;4.2052;3.2913;3.1999;3.1225;2.7612;2.4428;2.1841 -;-;-;-;-;-;-;-;-;- 680 1 1.883 168944.3 0.6399999856948853 3197 3412 6597 DOHH2_400M_050219_2,6611 DOHH2_400M_050219_2,6611,CCQSDVSIFS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6612 35.558 181.0 306140.0 25 0 17164.0 21758 LPMKVRAL 8 90 464.2934673967599 926.57238186032 2 464.2934448122978 MULTI CID FTMS 0 0 0 6597 120328.2265625 1.0 0 0.0 15 Unmodified _LPMKVRAL_ ENSG00000105364|ENST00000253099|MRPL4;nc|ENSG00000105364|Q9BYD3-2|MRPL4 24.67388899826682 0.525179942228231 2 {I|L}PMK 4 4 39.596 0.0 0.0 4.2734 0.0 0.0 0.0 454.2776278131469 454.2776278131469 17.356152084924528 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 + {I|L}PMK 4.2734 + + 148 + 1 1.883 47411.7 1.0 3198 3412 6597 DOHH2_400M_050219_2,6612 DOHH2_400M_050219_2,6612,LPMKVRAL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6613 35.572 800.0 87339.0 25 0 13005.0 -1 0 79 994.431183651305 2980.2717215541147 3 994.765185534954 MULTI CID FTMS 0 0 0 6597 101300.96875 1.0 0 0.0 16 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GDYT{[VA]|[{I|L}G]}{I|L} 9 -1 26.515 0.0 0.0 0.88968 0.0 0.0 0.0 2000.7819503961648 2000.7819503961648 12.4649125324075 0.0 0.0 0.0 0 0.0 0.0 1.3539171939081172 0.7302046884880937 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GDYT{[VA]|[{I|L}G]}{I|L} 0.88968 - 805 1 1.883 54177.0 0.4099999964237213 3199 3412 6597 DOHH2_400M_050219_2,6613 DOHH2_400M_050219_2,6613, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6614 35.586 800.0 104470.0 25 0 5620.4 + 37957 TMILKRTEL 9 131 552.8255673853629 1103.6365818375257 2 552.8259765505791 MULTI CID FTMS 0 0 0 6597 97507.0859375 1.0 0 0.0 17 Unmodified _TMILKRTEL_ ENSG00000115165|ENST00000264192|CYTIP;nc|ENSG00000115165|O60759-2|CYTIP 23.78978130925829 0.2284941198415988 2 TM{I|L}{I|L}K 5 4 65.93 0.0 0.0 5.9739 0.0 0.0 0.0 514.2635592096311 514.2635592096311 35.99021787145887 0.0 0.0 0.0 0 1.1861818737241734 2.0 0.0 0.0 + TM{I|L}{I|L}K 5.9739 + + 474 + 1 1.883 68419.7 0.4900000095367431 3200 3412 6597 DOHH2_400M_050219_2,6614 DOHH2_400M_050219_2,6614,TMILKRTEL False True TMILKRTEL 35.585904 552.825976550579 351191.09375 6597.0 ENSG00000115165|ENST00000264192|CYTIP;;nc|ENSG00000115165|O60759-2|CYTIP 2.69406787554423 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6615 35.588 45.0 1478200.0 25 0 352960.0 45186 YQRVRGPAP 9 66 522.2931373280986 1042.5717217229972 2 522.2917358279228 MULTI CID FTMS 0 0 0 6597 330613.25 0.3288500791941407 -1 0.0983200073242187 18 Unmodified _YQRVRGPAP_ ENST00000490089.1_1_7:99998800-100014813:-|nuORF;nc|ENSG00000078487|Q9H0M4-3|ZCWPW1;nc|ENSG00000078487|Q9H0M4-5|ZCWPW1 8.593279151180031 0.6146971463335029 2 [YQ]V 3 6 31.739 0.0 0.0 3.0443 0.0 0.0 0.0 649.3581063485941 649.3581063485941 14.827796776480463 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.7302046884880937 [YQ]V 3.0443 - 69 1 1.883 57881.8 1.0 3201 3412 6597 DOHH2_400M_050219_2,6615 DOHH2_400M_050219_2,6615,YQRVRGPAP False False False False non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_2 6616 35.596 452.0 118010.0 25 0 8647.8 + + -1 EEMPESGAGSEF 12 97 635.2500106409747 1268.4854683487492 2 635.2499877810478 MULTI CID FTMS 0 0 0 6597 130726.390625 1.0 0 0.0 19 Carbamidomethyl (C),Oxidation (M) _EEMQM(Oxidation (M))INAQC(Carbamidomethyl (C))_ ENSG00000125651|ENST00000394456|GTF2F1 14.838274106304384 0.5985701837916485 2 EEM 3 -1 29.654 0.0 0.0 2.3377 0.0 0.0 0.0 876.3359987044711 876.3359987044711 2.2011407381960133 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.7742275032520141 0.0 EEM 2.3377 + + 501 1 1.883 45941.1 1.0 3202 3412 6597 DOHH2_400M_050219_2,6616 DOHH2_400M_050219_2,6616,EEMQMINAQC False False EEMPESGAGSEF 35.596379 635.249987781048 1057073.25 6597.0 ENSG00000125651|ENST00000394456|GTF2F1 6.436004797617595 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6618 35.602 88.0 461110.0 25 0 32270.0 + 834 AETEPIVKM 9 79 509.26707073222633 1016.5195885312528 2 509.2677795290947 MULTI CID FTMS 0 0 0 6617 311928.4375 0.2241769086134765 1 -0.1054916381835937 1 Unmodified _AETEPIVKM_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 24.020572477871973 0.2255576514309169 2 {[CP]|[EA]}TE[{I|L}P]VKM 9 0 + 18.579 0.0 0.0 1.8277 1.8277 68.016 0.0 0.0 0.0 3.172874778693357 3.7975684617348575 3.172874778693357 3.226825097560422 0 0.6237125054200234 0.0 0.0 0.0 + + {[CP]|[EA]}TE[{I|L}P]VKM;[MN]{[QG]|[NA]}[{I|L}P]VKM;[MN]T[HV][R{M(Oxidation (M))|F}]{I|L} 1.8277;1.5103;0.51098 +;-;- + 132 + 1 1.891 37006.4 1.0 3203 3413 6617 DOHH2_400M_050219_2,6618 DOHH2_400M_050219_2,6618,AETEPIVKM False True AETEPIVKM 35.602201 509.267779529095 23875212.0 6617.0 ENST00000518442.5_1_8:109247181-109261015:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 6.560440540313721 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6619 35.604 57.0 805810.0 25 0 58699.0 43508 WWWWIWWQWW 10 49 874.9037639281709 1747.7929749231416 2 875.4052001833916 MULTI CID FTMS 0 0 0 6617 845494.375 0.3564286100466954 5 -0.5656509399414062 2 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 2 [NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAN{I|L}D 12 12 44.319 0.0 0.0 2.5357 0.0 0.0 0.0 354.11399478081665 354.11399478081665 27.0872875024979 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.0 0.4247425010840047 [NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAN{I|L}D 2.5357 - 94 1 1.891 37210.1 1.0 3204 3413 6617 DOHH2_400M_050219_2,6619 DOHH2_400M_050219_2,6619,WWWWIWWQWW False False False False splicing PXD020620_cell_line DOHH2_400M_050219_2 6620 35.605 66.0 1265800.0 25 0 99757.0 + 6332 DVKGRIYQL 9 103 546.3142445473059 0 546.3138915896416 PEAK CID FTMS 0 0 0 6617 709223.0 0.0746047690172613 -2 0.2192039489746093 3 Unmodified _DVKGRIYQL_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000536090.1_1_12:6626539-6627126:+|nuORF;ENST00000542472.1_1_12:6626979-6631036:+|nuORF 63.960520009940105 0.0127941097601138 2 VK{I|L} 3 6 21.555 0.0 0.0 1.9764 0.0 0.0 115.02570755014196 632.3174532525999 747.3431608027419 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.4247425010840047 VK{I|L} 1.9764 - 72 + 1 1.891 67899.2 1.0 3205 3413 6617 DOHH2_400M_050219_2,6620 DOHH2_400M_050219_2,6620,DVKGRIYQL True True DVKGRIYQL 35.605272 546.313891589642 113533584.0 6617.0 ENST00000542472.1_1_12:6626979-6631036:+|nuORF;;ENST00000536090.1_1_12:6626539-6627126:+|nuORF;;ENSG00000010292|ENST00000315579|NCAPD2 5.510031700134277 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6621 35.607 72.0 932870.0 25 0 154710.0 + 44165 YLDQISRY 8 73 529.2690653501048 1056.5235777670096 2 529.2694579958916 MULTI CID FTMS 0 0 0 6617 660388.6875 1.0 0 0.0 4 Unmodified _YLDQISRY_ ENSG00000131467|ENST00000590720|PSME3;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3 47.74868867922204 0.1498366402366518 2 Y{I|L}DQ{I|L}SRY 8 0 + 92.644 0.0 0.0 8.7688 8.7688 94.102 0.0 0.0 0.0 82.04842787361075 13.399480616943508 13.399480616943508 9.262137858390815 0 0.805462187404089 2.0 0.0 0.8494850021680094 + + Y{I|L}DQ{I|L}SRY;Y{I|L}D[AG]{I|L}SRY;Y{I|L}DQ{I|L}[TP][HA];Y{I|L}{[MG]|[TS]}[PA]SRY;Y{I|L}D[AG]{I|L}[TP][HA];Y{I|L}[HN][R{M(Oxidation (M))|F}][HA];[Y{I|L}]WWD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[Y{I|L}][C(Carbamidomethyl (C))R][NG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[RH][NG][PA]SRY 8.7688;7.8921;6.6239;5.1883;4.9483;3.4736;2.7662;1.7163;0.71656 +;-;-;-;-;-;-;-;- + 152 + 1 1.891 54919.0 1.0 3206 3413 6617 DOHH2_400M_050219_2,6621 DOHH2_400M_050219_2,6621,YLDQISRY False True YLDQISRY 35.606962 529.269457995892 3659048.0 6617.0 ENSG00000131467|ENST00000590720|PSME3;;nc|ENSG00000131467|P61289-2|PSME3;;nc|ENSG00000131467|P61289-3|PSME3 6.032619158426921 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6622 35.609 77.0 698890.0 25 0 165120.0 + 45280 YSDKYGLGY 9 85 533.2479606977075 1064.481368462215 2 533.2480956912041 MULTI CID FTMS 0 0 0 6617 625902.8125 0.0261452832642199 7 -0.8135032653808594 5 Unmodified _YSDKYGLGY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 43.77239144664712 0.0547478964384323 2 YSDK 4 5 48.193 0.0 0.0 4.5273 0.0 0.0 0.0 568.2393282525999 568.2393282525999 23.884030681983788 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.0 0.0 + YSDK 4.5273 + + 254 + 1 1.891 48536.0 1.0 3207 3413 6617 DOHH2_400M_050219_2,6622 DOHH2_400M_050219_2,6622,YSDKYGLGY True True YSDKYGLGY 35.608747 533.248095691204 679161728.0 6617.0 ENST00000564794.1_1_16:23700038-23701081:+|nuORF;;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;;ENSG00000166851|ENST00000300093|PLK1 10.254308700561523 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6623 35.612 170.0 417230.0 25 0 30086.0 + 32747 SEDGKIHVW 9 105 535.7667757761046 1069.5189986190092 2 535.7669555544853 MULTI CID FTMS 0 0 0 6617 296467.375 0.807206643646947 -1 0.1208839416503906 6 Unmodified _SEDGKIHVW_ ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF 78.7280429016045 0.0178249292250809 2 {[ES]|[DT]|[{I|L}C]}DGK{I|L}HVW 9 0 + 47.748 0.0 0.0 4.4644 4.4644 82.809 0.0 0.0 0.0 5.827935343467118 5.827935343467118 5.827935343467118 10.276720351813452 0 2.118415180652539 0.0 0.3252574989159953 0.0 + + {[ES]|[DT]|[{I|L}C]}DGK{I|L}HVW;{[ES]|[DT]|[{I|L}C]}{[WN]|[YH]}{I|L}HVW;{[ES]|[DT]|[{I|L}C]}DGK{I|L}HV{[DA]|[EG]};[MT]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}HVW;[R{M(Oxidation (M))|F}]YYHVW;[H{I|L}][MT]{M(Oxidation (M))|F}HVW;[TP]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}HVW;[HV]{I|L}W{[QC]|[C(Carbamidomethyl (C))A]}VW;[H{I|L}]VW{[QC]|[C(Carbamidomethyl (C))A]}VW;[HV][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}HVW 4.4644;3.5035;3.0585;2.8661;2.8083;2.7964;2.7916;2.7236;2.7236;2.1655 +;-;-;-;-;-;-;-;-;- + 476 + 1 1.891 60546.2 1.0 3208 3413 6617 DOHH2_400M_050219_2,6623 DOHH2_400M_050219_2,6623,SEDGKIHVW True True SEDGKIHVW 35.612078 535.766955554485 2423993.75 6617.0 ENST00000487402.1_1_3:52291508-52301068:-|nuORF;;ENSG00000164091|ENST00000296490|WDR82 7.721297899881999 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6624 35.614 76.0 682570.0 25 0 46685.0 + -1 EEISPNIRY 9 76 560.7880551212362 1119.5615573092723 2 560.7850829958916 MULTI CID FTMS 0 0 0 6617 297769.0625 1.0 0 0.0 7 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))ESISVIRQM(Oxidation (M))_ nc|ENSG00000167881|Q9UHB9-4|SRP68;ENSG00000167881|ENST00000307877|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68 13.90604991867851 0.4602628045680013 2 EE{I|L}SP{[QV]|[N{I|L}]|[RA]|[KV]}RY 9 -1 + 47.113 0.0 0.0 4.2082 4.2082 83.326 0.0 0.0 0.0 30.91514981121349 9.665762445130497 9.665762445130497 15.898255349109505 0 0.0 1.5228787452803376 0.0 0.0 EE{I|L}SP{[QV]|[N{I|L}]|[RA]|[KV]}RY;{[TV]|[{I|L}S]}H{[QV]|[N{I|L}]|[RA]|[KV]}PS{I|L}[HC] 4.2082;2.7881 -;- 76 + 1 1.891 42581.0 1.0 3209 3413 6617 DOHH2_400M_050219_2,6624 DOHH2_400M_050219_2,6624,ESISVIRQM False False EEISPNIRY 35.613843 560.785082995892 1670172.0 6617.0 nc|ENSG00000167881|Q9UHB9-4|SRP68;;ENSG00000167881|ENST00000307877|SRP68;;nc|ENSG00000167881|Q9UHB9-2|SRP68 6.074848810831706 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6625 35.617 156.0 437300.0 25 0 39290.0 + 11806 GLMKKAYEL 9 98 526.7939425425382 1051.5733321518762 2 526.7943603396416 MULTI CID FTMS 0 0 0 6617 283510.125 0.7934679766816906 -1 0.1208839416503906 8 Unmodified _GLMKKAYEL_ chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;ENSG00000068305|ENST00000557942|MEF2A;ENSG00000081189|ENST00000504921|MEF2C;ENSG00000116604|ENST00000348159|MEF2D;ENSG00000213999|ENST00000424583|MEF2B;ENST00000558983.5_1_15:100173318-100211695:+|nuORF;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078|MEF2A;nc|ENSG00000081189|Q06413-2|MEF2C;nc|ENSG00000081189|Q06413-3|MEF2C;nc|ENSG00000081189|Q06413-4|MEF2C;nc|ENSG00000081189|Q06413-5|MEF2C;nc|ENSG00000081189|Q06413-6|MEF2C;nc|ENSG00000116604|Q14814-2|MEF2D;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D;nc|ENSG00000116604|Q14814-6|MEF2D;nc|ENSG00000213999|Q02080|MEF2B 27.628801355627647 0.1796483985696185 2 {I|L}GMK 4 7 50.918 0.0 0.0 4.842 0.0 0.0 0.0 619.3100479136342 619.3100479136342 36.938200260161125 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}GMK 4.842 - 196 + 1 1.891 59397.1 1.0 3210 3413 6617 DOHH2_400M_050219_2,6625 DOHH2_400M_050219_2,6625,GLMKKAYEL False True GLMKKAYEL 35.616945 526.794360339642 2158637.25 6617.0 ENST00000558983.5_1_15:100173318-100211695:+|nuORF;;nc|ENSG00000116604|Q14814-4|MEF2D;;ENSG00000116604|ENST00000348159|MEF2D;;nc|ENSG00000068305|Q02078|MEF2A;;nc|ENSG00000068305|Q02078-6|MEF2A;;chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;;nc|ENSG00000081189|Q06413-2|MEF2C;;nc|ENSG00000081189|Q06413-3|MEF2C;;nc|ENSG00000068305|Q02078-4|MEF2A;;ENSG00000213999|ENST00000424583|MEF2B;;ENSG00000068305|ENST00000557942|MEF2A;;nc|ENSG00000068305|Q02078-5|MEF2A;;nc|ENSG00000081189|Q06413-5|MEF2C;;nc|ENSG00000213999|Q02080|MEF2B;;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;;nc|ENSG00000068305|Q02078-3|MEF2A;;nc|ENSG00000116604|Q14814-6|MEF2D;;nc|ENSG00000116604|Q14814-2|MEF2D;;ENSG00000081189|ENST00000504921|MEF2C;;nc|ENSG00000081189|Q06413-6|MEF2C;;nc|ENSG00000081189|Q06413-4|MEF2C;;nc|ENSG00000116604|Q14814-3|MEF2D;;nc|ENSG00000116604|Q14814-5|MEF2D 5.757869243621826 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6626 35.62 136.0 508900.0 25 0 75052.0 + 28064 PPGGTPLMVAL 11 86 351.531651674405 1051.573125623415 3 351.5316039919853 MULTI CID FTMS 0 0 0 6617 268454.6875 0.7217880848230708 -1 0.1208839416503906 9 Unmodified _PPGGTPLMVAL_ REV__ENST00000356206.10_1_8:23307502-23315196:-|nuORF 13.90604991867851 0.7458848613461305 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 3 -1 19.666 0.0 0.0 1.8701 0.0 0.0 0.0 701.3453463190061 701.3453463190061 0.6812779123253456 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 1.8701 - 44 + 1 1.891 58438.7 1.0 3211 3413 6617 DOHH2_400M_050219_2,6626 DOHH2_400M_050219_2,6626,PPGGTPLMVAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6627 35.622 85.0 663430.0 25 0 54342.0 + 33678 SIYDEYIM 8 98 517.2319709237514 1032.4493889143027 2 517.2329589724541 MULTI CID FTMS 0 0 0 6617 253165.109375 1.0 0 0.0 10 Unmodified _SIYDEYIM_ REV__ENSG00000091844|ENST00000206262|RGS17 10.183394434864962 0.7604730176254005 2 VW 2 -1 16.454 0.0 0.0 1.5937 0.0 0.0 729.2911380371528 0.0 729.2911380371528 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 VW 1.5937 - 166 + 1 1.891 47192.7 1.0 3212 3413 6617 DOHH2_400M_050219_2,6627 DOHH2_400M_050219_2,6627,SIYDEYIM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6628 35.625 163.0 440480.0 25 0 33837.0 + -1 VVMSAPIVFI 10 110 364.54532526499634 1090.614146395189 3 364.5450012087822 MULTI CID FTMS 0 0 0 6617 181104.5625 0.1545027436129526 -2 0.2192039489746093 11 Oxidation (M) _VVM(Oxidation (M))SAPIVFI_ REV__ENSG00000186509|ENST00000335397|OR9Q1 10.150570793230772 0.6772252923741907 2 {I|L} 1 -1 13.099 0.0 0.0 1.2011 0.0 0.0 959.5191584574922 0.0 959.5191584574922 0.0 -5.484550065040281 -5.484550065040281 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2011 + + 52 + 1 1.891 60883.5 1.0 3213 3413 6617 DOHH2_400M_050219_2,6628 DOHH2_400M_050219_2,6628,VVMSAPIVFI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6629 35.628 147.0 316830.0 25 0 24564.0 + 14169 IDEFPYLI 8 96 505.2658349332098 1008.5171169332197 2 505.2662536501884 MULTI CID FTMS 0 0 0 6617 172125.96875 1.0 0 0.0 12 Unmodified _IDEFPYLI_ REV__ENSG00000178385|ENST00000427836|PLEKHM3;REV__nc|ENSG00000178385|Q6ZWE6-2|PLEKHM3 7.910154910731844 0.7763180056447161 2 Y 1 -1 13.979 0.0 0.0 1.3861 0.0 0.0 827.4429572425931 0.0 827.4429572425931 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3861 + + 44 + 1 1.891 41656.3 1.0 3214 3413 6617 DOHH2_400M_050219_2,6629 DOHH2_400M_050219_2,6629,IDEFPYLI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6630 35.632 214.0 322440.0 25 0 19604.0 + -1 GEVDPKVAL 9 106 464.26217342947086 463.2548969628709 1 464.2622253298759 MULTI CID FTMS 0 0 0 6617 170527.140625 1.0 0 0.0 13 ENST00000593353.5_1_19:14676947-14682853:-|nuORF;ENSG00000099795|ENST00000215565|NDUFB7 2 [DV]{I|L} 3 -1 18.451 0.0 0.0 3.9828 0.0 0.0 0.0 133.05211310960837 133.05211310960837 4.471172114978653 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [DV]{I|L} 3.9828 - 54 1 1.891 60448.6 1.0 3215 3413 6617 DOHH2_400M_050219_2,6630 DOHH2_400M_050219_2,6630, False False GEVDPKVAL 35.631757 464.262225329876 1561403.875 6617.0 ENST00000593353.5_1_19:14676947-14682853:-|nuORF;;ENSG00000099795|ENST00000215565|NDUFB7 2.077862103780111 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6631 35.637 271.0 312010.0 25 0 31017.0 + 29637 QMSERNIL 8 131 495.7553298349165 0 495.7556945681572 PEAK CID FTMS 0 0 0 6617 139436.78125 0.5670976075716436 -1 0.1208839416503906 14 Unmodified _QMSERNIL_ ENSG00000111642|ENST00000544040|CHD4;ENST00000535717.1_1_12:6679844-6680280:-|nuORF;nc|ENSG00000111642|Q14839-2|CHD4 34.40172386719151 0.1907325408143214 2 {I|L} 1 7 6.2814 0.0 0.0 0.63481 0.0 0.0 131.0967355119707 742.2965181940061 873.3932537059768 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {I|L} 0.63481 + + 199 + 1 1.891 69334.0 1.0 3216 3413 6617 DOHH2_400M_050219_2,6631 DOHH2_400M_050219_2,6631,QMSERNIL False True QMSERNIL 35.63676 495.755694568157 1400825.0 6617.0 ENSG00000111642|ENST00000544040|CHD4;;ENST00000535717.1_1_12:6679844-6680280:-|nuORF;;nc|ENSG00000111642|Q14839-2|CHD4 5.926061312357585 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6632 35.651 800.0 208900.0 25 0 43269.0 + 13480 HLVDEPQNLIK 11 118 653.361704334249 1304.708855735298 2 653.3635131716728 MULTI CID FTMS 0 0 0 6617 96544.5703125 0.0547589984679521 2 -0.2121162414550781 15 Unmodified _HLVDEPQNLIK_ CON__P02769 80.89551112106177 0.0069906411478691 2 H{I|L}VDE[QP]N{I|L}{I|L}K 11 0 + 106.77 0.0 0.0 8.1834 8.1834 91.3 0.0 0.0 0.0 86.13494199693788 17.077421818143975 17.077421818143975 9.128498242811006 0 3.345226667343314 1.6989700043360187 0.3494850021680094 0.6694451763165201 + + H{I|L}VDE[QP]N{I|L}{I|L}K;H{I|L}VDE[QP]GG{I|L}{I|L}K;[H{I|L}]VDE[QP]N{I|L}{I|L}K;[H{I|L}]VDE[QP]GG{I|L}{I|L}K;[{I|L}V]HDE[QP]N{I|L}{I|L}K;[H{I|L}]VH{[SA]|[TG]}{[CA]|SS}N{I|L}{I|L}K;[{I|L}V]HDE[QP]GG{I|L}{I|L}K;[H{I|L}]V[QA][C(Carbamidomethyl (C))S]H{I|L}{I|L}K;[H{I|L}]VH{[SA]|[TG]}[C(Carbamidomethyl (C))Q]{I|L}{I|L}K;[H{I|L}]VD{[VA]|[{I|L}G]}HHH{I|L}K 8.1834;7.4838;5.67;4.9703;3.8921;3.5332;3.1925;3.0503;2.9316;2.909 +;-;+;-;-;-;-;-;-;- + 692 + 1 1.891 125019.4 0.6200000047683716 3217 3413 6617 DOHH2_400M_050219_2,6632 DOHH2_400M_050219_2,6632,HLVDEPQNLIK True True False False contaminant PXD020620_cell_line DOHH2_400M_050219_2 6633 35.664 800.0 150550.0 25 0 15578.0 + 5977 DQYMQEKMEVY 11 128 732.3127535720795 1462.6109542109589 2 732.8056518435478 MULTI CID FTMS 0 0 0 6617 116482.5546875 0.0698664105239371 7 -0.8135032653808594 16 Unmodified _DQYMQEKMEVY_ REV__ENSG00000111707|ENST00000543473|SUDS3 12.240655878213236 0.7805268987462184 2 [AG]DAG[HN]AQQNA{M(Oxidation (M))|F}Y 14 -1 + 73.542 0.0 0.0 5.0281 5.0281 74.661 0.0 0.0 0.0 2.7770969577279487 6.721222823376962 2.7770969577279487 1.896640662449542 0 0.8182503180159344 1.3010299956639813 1.9498147274412183 0.7302046884880937 [AG]DAG[HN]AQQNA{M(Oxidation (M))|F}Y;[AG]DQ[HN]AQQNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AG[HN]AQQNA{M(Oxidation (M))|F}Y;[AG]NE[HN]AQQNA{M(Oxidation (M))|F}Y;[AG]SM{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}Q[HN]AQQNA{M(Oxidation (M))|F}Y;[AG]DAG[HN]AQEPS{M(Oxidation (M))|F}Y 5.0281;4.8984;4.8409;4.8382;4.6926;4.5922;4.5216;4.4741;4.45;4.4451 -;-;-;-;-;-;-;-;-;- 3415 1 1.891 93941.8 0.6100000143051147 3218 3413 6617 DOHH2_400M_050219_2,6633 DOHH2_400M_050219_2,6633,DQYMQEKMEVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6634 35.678 800.0 81349.0 25 0 3410.8 -1 HKRFCRWRDCQ 11 97 824.8909726634149 1647.7673923936295 2 824.8932983279228 MULTI CID FTMS 0 0 0 6617 102323.4765625 1.0 0 0.0 17 2 Carbamidomethyl (C) _HKRFC(Carbamidomethyl (C))RWRDC(Carbamidomethyl (C))Q_ ENSG00000173253|ENST00000358146|DMRT2;nc|ENSG00000173253|Q9Y5R5-2|DMRT2 2.735195868890462 0.8622431031272658 2 {[QV]|[N{I|L}]|[RA]|[KV]}DT[YK]QAEN{I|L}NPE 14 -1 + 67.744 0.0 0.0 4.1112 4.1112 78.492 0.0 0.0 0.0 4.391074619822362 33.279737452027376 4.391074619822362 9.05024486769144 0 1.424742501084005 1.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}DT[YK]QAEN{I|L}NPE;{[QV]|[N{I|L}]|[RA]|[KV]}DT[YK][AG]AEN{I|L}NPE;{[QV]|[N{I|L}]|[RA]|[KV]}DT[YK]QAEN{I|L}GGPE;{[QV]|[N{I|L}]|[RA]|[KV]}DT[YK]QAEGG{I|L}NPE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N[YR]KKEN{I|L}NPE;{[QD]|[EN]|[WG]|[KD]|[RS]}D[YR]KKEN{I|L}NPE;{[QV]|[N{I|L}]|[RA]|[KV]}DT[YK]QAEN{I|L}DPQ;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KA][YK]QAEN{I|L}NPE;{[QD]|[EN]|[WG]|[KD]|[RS]}{[TV]|[{I|L}S]}[YK]QAEN{I|L}NPE;{[QV]|[N{I|L}]|[RA]|[KV]}DT[YK]QAEN[DP]{I|L}Q 4.1112;3.562;3.562;3.562;3.4117;3.3799;3.3224;3.2535;3.2217;3.2017 -;-;-;-;-;-;-;-;-;- 381 1 1.891 50284.0 0.5699999928474426 3219 3413 6617 DOHH2_400M_050219_2,6634 DOHH2_400M_050219_2,6634,HKRFCRWRDCQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6635 35.684 248.0 339970.0 25 0 92270.0 35708 SVGPIPARF 9 91 472.2727239866656 0 472.2723876833916 PEAK CID FTMS 0 0 0 6617 136489.765625 0.738424584552193 12 -1.0487632751464844 18 Unmodified _SVGPIPARF_ ENST00000367498.7_1_1:185280415-185286453:-|nuORF 7.910154910731844 0.3362437653303669 2 M{I|L} 2 8 8.5835 0.0 0.0 0.91069 0.0 0.0 471.2658500800207 224.1293886774047 695.3952387574254 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L} 0.91069 - 35 + 1 1.891 70304.2 1.0 3220 3413 6617 DOHH2_400M_050219_2,6635 DOHH2_400M_050219_2,6635,SVGPIPARF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6636 35.688 197.0 314960.0 25 0 36698.0 + 29319 LQYLHRNFIIHR 12 96 404.24534290931945 0 404.2454711794853 PEAK CID FTMS 0 0 0 6617 113254.3984375 0.5239969044321129 -1 0.1208839416503906 19 Unmodified _QILKTTLTHR_ ENST00000504473.5_1_16:89753600-89759778:+|nuORF;nc|ENSG00000185324|Q15131-2|CDK10;ENSG00000185324|ENST00000353379|CDK10;ENST00000378277.8_1_16:89756998-89758964:+|nuORF;ENST00000505733.5_1_16:89753118-89759778:+|nuORF;nc|ENSG00000185324|Q15131-3|CDK10;nc|ENSG00000185324|Q15131-4|CDK10;nc|ENSG00000185324|Q15131-5|CDK10;ENST00000561477.1_1_16:89758247-89760641:+|nuORF;nc|ENSG00000185324|Q15131-7|CDK10 5.783430956126388 0.3961065659209837 2 {I|L}{I|L}H 3 7 11.031 0.0 0.0 1.3678 0.0 0.0 269.1371105802894 171.08895288638908 440.2260634666785 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{I|L}H 1.3678 - 12 + 1 1.891 53348.7 1.0 3221 3413 6617 DOHH2_400M_050219_2,6636 DOHH2_400M_050219_2,6636,QILKTTLTHR False False LQYLHRNFIIHR 35.68813 404.245471179485 630693.3125 6617.0 ENST00000504473.5_1_16:89753600-89759778:+|nuORF;;nc|ENSG00000185324|Q15131-2|CDK10;;ENSG00000185324|ENST00000353379|CDK10;;ENST00000378277.8_1_16:89756998-89758964:+|nuORF;;ENST00000505733.5_1_16:89753118-89759778:+|nuORF;;nc|ENSG00000185324|Q15131-3|CDK10;;nc|ENSG00000185324|Q15131-4|CDK10;;nc|ENSG00000185324|Q15131-5|CDK10;;ENST00000561477.1_1_16:89758247-89760641:+|nuORF;;nc|ENSG00000185324|Q15131-7|CDK10 0.196362296740214 4.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6637 35.702 800.0 139680.0 25 0 14812.0 -1 0 106 674.6919255737688 2021.0539473215065 3 674.6915161013603 MULTI CID FTMS 0 0 0 6617 102984.3984375 0.8543107556934919 -4 0.337799072265625 20 2 KPTGARTA[VP] 10 -1 48.396 0.0 0.0 2.3946 0.0 0.0 1024.481682857147 0.0 1024.481682857147 0.0 32.911159568492465 0.0 0.0 0 0.8494850021680094 0.0 0.805462187404089 0.3252574989159953 KPTGARTA[VP] 2.3946 - 1178 + 1 1.891 91039.5 0.5099999904632568 3222 3413 6617 DOHH2_400M_050219_2,6637 DOHH2_400M_050219_2,6637, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6639 35.707 19.0 2632500.0 25 0 340480.0 + 5739 DPMKARVVL 9 67 514.7993252422002 1027.5840975512003 2 514.8000366091728 MULTI CID FTMS 0 0 0 6638 2288186.25 0.3370346808885296 1 -0.1066246032714843 1 Unmodified _DPMKARVVL_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 25.399314129420983 0.2080152500878129 2 DPMKA 5 4 54.865 0.0 0.0 5.3392 0.0 0.0 0.0 482.3114107721313 482.3114107721313 41.05265951879794 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + DPMKA 5.3392 + + 53 + 1 1.892 46350.3 1.0 3223 3414 6638 DOHH2_400M_050219_2,6639 DOHH2_400M_050219_2,6639,DPMKARVVL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6640 35.709 109.0 776850.0 25 0 190920.0 10275 FQWYIFYFV 9 43 656.8239580330244 1311.633363132849 2 656.8246948122978 MULTI CID FTMS 0 0 0 6638 582318.4375 1.0 0 0.0 2 Unmodified _FQWYIFYFV_ ENSG00000149485|ENST00000350997|FADS1;nc|ENSG00000149485|O60427-2|FADS1;nc|ENSG00000149485|O60427|FADS1 4.75600775471527 0.7486543447549536 2 Y 1 8 6.9897 0.0 0.0 0.5329 0.0 0.0 97.97633419789038 1047.5691261852069 1145.5454603830972 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.5329 + + 19 + 1 1.892 66658.0 1.0 3224 3414 6638 DOHH2_400M_050219_2,6640 DOHH2_400M_050219_2,6640,FQWYIFYFV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6641 35.71 24.0 3623600.0 25 0 425900.0 + 20141 LKPGILPVPK 10 85 531.3576326146177 1060.7007122960354 2 531.3578979372978 MULTI CID FTMS 0 0 0 6638 2685132.25 0.7828143969240554 -1 0.1054916381835937 3 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 34.221707139014875 0.2185845369562963 2 K{I|L}A[{I|L}P]VKD{I|L} 9 -1 78.967 0.0 0.0 7.4448 0.0 0.0 0.0 80.05125604801015 80.05125604801015 56.47608139917317 0.0 0.0 0.0 0 1.924742501084005 1.0 1.1382104921644451 0.0 K{I|L}A[{I|L}P]VKD{I|L} 7.4448 - 252 + 1 1.892 70869.5 1.0 3225 3414 6638 DOHH2_400M_050219_2,6641 DOHH2_400M_050219_2,6641,LKPGILPVPK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6642 35.716 331.0 214960.0 25 0 39072.0 + + -1 SEINGDAGSNYI 12 108 620.2772417387005 1238.5399305442008 2 620.2780029177666 MULTI CID FTMS 0 0 0 6638 264669.0625 1.0 0 0.0 4 Carbamidomethyl (C) _DTLHC(Carbamidomethyl (C))GFNYI_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC 20.453626601364224 0.5043500229302764 2 [YN][SG]AGHGSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 12 -1 + 30.261 0.0 0.0 2.4433 2.4433 67.712 0.0 0.0 0.0 2.538012203482289 5.061668675368622 2.538012203482289 2.538012203482289 0 0.1989700043360188 1.5228787452803376 0.6989700043360187 0.2742275032520141 [YN][SG]AGHGSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}{I|L}NGDAGSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[YN]{[QS]|[NT]}GHGSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}N{I|L}GDAGSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[YN][SG]QHGSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}{I|L}NYHSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}NG{I|L}DAGSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[YN][SG]A[HN]SD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[MG]|[TS]}[NP]TDAGSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[NS]QYGHGSD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 2.4433;2.2384;2.1525;2.001;1.9095;1.8303;1.7949;1.7313;1.7107;1.7035 -;-;-;-;-;-;-;-;-;- 2559 1 1.892 56952.0 1.0 3226 3414 6638 DOHH2_400M_050219_2,6642 DOHH2_400M_050219_2,6642,DTLHCGFNYI False False SEINGDAGSNYI 35.71619 620.278002917767 1782898.625 6638.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 6.0078887939453125 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6643 35.721 261.0 242900.0 25 0 19369.0 + 664 AEMAQNAVRL 10 79 551.7872392757492 1101.5599256182984 2 551.7870361208916 MULTI CID FTMS 0 0 0 6638 175322.984375 0.8476299508222728 -1 0.1054916381835937 5 Unmodified _AEMAQNAVRL_ ENSG00000168036|ENST00000349496|CTNNB1 67.08073823543168 0.0190306485248484 2 {[CP]|[EA]}MAQNAV[R{I|L}] 10 0 + 75.45 0.0 0.0 6.8494 6.8494 89.381 0.0 0.0 0.0 56.726759565325295 5.764837301042718 5.764837301042718 9.164539485499262 0 1.424742501084005 0.0 0.0 1.579689690656103 + + {[CP]|[EA]}MAQNAV[R{I|L}];{[CP]|[EA]}MAQGGAV[R{I|L}];{[CP]|[EA]}MA[AG]NAV[R{I|L}];{[CP]|[EA]}MA[AG]GGAV[R{I|L}];{[CP]|[EA]}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}NAV[R{I|L}];{[CP]|[EA]}[SG]WNAV[R{I|L}];{[CP]|[EA]}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}GGAV[R{I|L}];{[CP]|[EA]}[SG]WGGAV[R{I|L}];{[CP]|[EA]}[SG]{[DA]|[EG]}NAV[R{I|L}] 6.8494;6.0175;6.0175;5.1888;3.3767;3.2633;2.5448;2.4313;2.4313 +;-;-;-;-;-;-;-;- + 185 + 1 1.892 54514.1 1.0 3227 3414 6638 DOHH2_400M_050219_2,6643 DOHH2_400M_050219_2,6643,AEMAQNAVRL True True AEMAQNAVRL 35.721045 551.787036120892 1346676.625 6638.0 ENSG00000168036|ENST00000349496|CTNNB1 7.177282492319743 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6644 35.724 139.0 622110.0 25 0 124230.0 + 32748 SEDGKIHVW 9 102 357.5135573095533 0 357.5134765505791 PEAK CID FTMS 0 0 0 6638 155544.546875 0.9873174179284452 1 -0.1066246032714843 6 Unmodified _SEDGKIHVW_ ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF 8.593279151180031 0.3284076903191179 2 N 1 9 9.6041 0.0 0.0 1.347 0.0 0.0 508.9224870782878 87.02782617740468 595.9503132556924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 N 1.347 - 6 + 1 1.892 78124.3 1.0 3228 3414 6638 DOHH2_400M_050219_2,6644 DOHH2_400M_050219_2,6644,SEDGKIHVW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6645 35.728 250.0 371480.0 25 0 33292.0 + 39751 VELLIFIH 8 101 492.2982078965625 982.581862859925 2 492.2988159060478 MULTI CID FTMS 0 0 0 6638 154289.390625 0.6164310984504762 -1 0.1054916381835937 7 Unmodified _VELLIFIH_ REV__ENST00000553480.1_1_14:45331723-45332152:-|nuORF 20.871210003555333 0.6025813472596342 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}PK 5 -1 40.674 0.0 0.0 4.1395 0.0 0.0 0.0 413.21640955142817 413.21640955142817 28.68440000316717 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}PK 4.1395 - 220 + 1 1.892 74275.4 1.0 3229 3414 6638 DOHH2_400M_050219_2,6645 DOHH2_400M_050219_2,6645,VELLIFIH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6646 35.735 370.0 329910.0 25 0 31223.0 + 45384 YTADGKEVLEY 11 129 644.308475954619 1286.602398976038 2 644.3082153201103 MULTI CID FTMS 0 0 0 6638 150186.859375 0.1301261557612938 -1 0.1054916381835937 8 Unmodified _YTADGKEVLEY_ ENSG00000196655|ENST00000533632|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889791-118894106:+|nuORF 87.12335221954112 0.0023590323766729 2 YTW[RP]TATEY 10 7 + 75.606 0.0 0.0 5.8764 5.8764 80.794 0.0 0.0 0.0 30.390078662816777 11.505149978319892 11.505149978319892 4.107981885344159 0 1.4604093769761874 2.0 1.274227503252014 0.0 YTW[RP]TATEY;YT[Y{I|L}][WH]{I|L}EY;YTAQE[{I|L}V]ATEY;[YT]AD[KG]EV{I|L}EY;[YT][{I|L}P]PEY{I|L}EY;YTADAA[{I|L}V]ATEY;[TA]QAEVTY{I|L}EY;[KG]DAEVTY{I|L}EY;YTA[AG]E[{I|L}V]ATEY;[TA]QAEV{I|L}EYTY 5.8764;5.5571;5.3393;5.3053;5.0619;5.0054;4.9524;4.6709;4.6298;4.5783 -;-;-;+;-;-;-;-;-;- + 13216 + 1 1.892 93251.1 1.0 3230 3414 6638 DOHH2_400M_050219_2,6646 DOHH2_400M_050219_2,6646,YTADGKEVLEY True True YTADGKEVLEY 35.735155 644.30821532011 20162958.0 6638.0 ENSG00000196655|ENST00000533632|TRAPPC4;;ENST00000531290.5_1_11:118889791-118894106:+|nuORF;;ENST00000447216.2_1_11:118889505-118891019:+|nuORF 6.49973185857137 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6647 35.749 800.0 179300.0 25 0 12624.0 + 7121 EEMNPQLGY 9 160 540.7364995333655 1079.458446133531 2 540.7371703982353 MULTI CID FTMS 0 0 0 6638 121821.6484375 0.8443408879706812 -1 0.1054916381835937 9 Unmodified _EEMNPQLGY_ ENSG00000144357|ENST00000272793|UBR3;nc|ENSG00000144357|Q6ZT12-2|UBR3;nc|ENSG00000144357|Q6ZT12-3|UBR3;nc|ENSG00000144357|Q6ZT12-4|UBR3 81.89019881105858 0.0170587746866453 2 EEMNPQ{I|L}GY 9 0 + 53.092 0.0 0.0 4.9184 4.9184 83.244 0.0 0.0 0.0 22.290325063701744 18.99236289110847 18.99236289110847 9.208187539523747 0 1.548455006504028 1.0457574905606752 1.385151878060192 0.4247425010840047 + + EEMNPQ{I|L}GY;EEMGGPQ{I|L}GY;EEMNP[AG]{I|L}GY;EEMGGP[AG]{I|L}GY;[MN]EEPQ{I|L}GY;[QP]D{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{I|L}GY;[HT]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}N[CS]Y;[HT]{I|L}Q[QT][CS]Y;[QP][EC]AAE{I|L}GY;[HT]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))S]GY 4.9184;4.0654;4.0654;2.8229;2.6546;2.6336;2.4461;2.4094;2.3992;2.2618 +;-;-;-;-;-;-;-;-;- + 732 1 1.892 115100.1 0.6100000143051147 3231 3414 6638 DOHH2_400M_050219_2,6647 DOHH2_400M_050219_2,6647,EEMNPQLGY True True EEMNPQLGY 35.748986 540.737170398235 1176694.625 6638.0 ENSG00000144357|ENST00000272793|UBR3;;nc|ENSG00000144357|Q6ZT12-3|UBR3;;nc|ENSG00000144357|Q6ZT12-4|UBR3;;nc|ENSG00000144357|Q6ZT12-2|UBR3 6.654744466145833 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6648 35.763 800.0 101350.0 25 0 6283.8 -1 0 84 910.9155704039888 1819.8165878747773 2 911.4153320193292 MULTI CID FTMS 0 0 0 6638 98954.1015625 0.2665524580835349 8 -0.7778968811035156 10 2 QD[WH]{[QD]|[EN]|[WG]|[KD]|[RS]} 6 -1 25.731 0.0 0.0 1.4139 0.0 0.0 992.4718495099625 0.0 992.4718495099625 0.0 6.478174818886373 0.0 0.0 0 0.5 0.0 0.0 0.805462187404089 QD[WH]{[QD]|[EN]|[WG]|[KD]|[RS]} 1.4139 - 178 1 1.892 57569.6 0.5299999713897705 3232 3414 6638 DOHH2_400M_050219_2,6648 DOHH2_400M_050219_2,6648, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6649 35.777 800.0 287800.0 25 0 11889.0 + 35346 STDKFKTDFY 10 158 626.297930669216 0 626.2976562380791 PEAK CID FTMS 0 0 0 6638 91165.578125 0.2007374229576076 -1 0.1054916381835937 11 Unmodified _STDKFKTDFY_ ENSG00000168090|ENST00000303904|COPS6 125.18120922955336 1.2607269217778038e-08 2 ST{M(Oxidation (M))|F}R{M(Oxidation (M))|F}STD 8 5 61.421 0.0 0.0 4.9114 0.0 0.0 181.07147367787465 125.07244287662344 306.14391655449805 0.0 0.0 0.0 0.0 0 1.3807196863200843 0.0 2.1373453591370684 0.5796896906561032 ST{M(Oxidation (M))|F}R{M(Oxidation (M))|F}STD 4.9114 - 7973 + 1 1.892 169505.0 0.5799999833106995 3233 3414 6638 DOHH2_400M_050219_2,6649 DOHH2_400M_050219_2,6649,STDKFKTDFY True True STDKFKTDFY 35.776671 626.297656238079 5852401.0 6638.0 ENSG00000168090|ENST00000303904|COPS6 7.668435255686442 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6650 35.792 800.0 121660.0 25 0 9008.4 8931 FAMEQREEERY 11 99 744.3302669433846 1486.645980953569 2 744.8267700076103 MULTI CID FTMS 0 0 0 6638 88738.3515625 0.0849430534622786 7 -0.7695159912109375 12 Unmodified _FAMEQREEERY_ ENSG00000197150|ENST00000358849|ABCB8;ENST00000466514.5_1_7:150731570-150742433:+|nuORF;nc|ENSG00000197150|Q9NUT2-3|ABCB8;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-5|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8 3.5964929083625545 0.858179447565866 2 ADQQAEEE{I|L}Q 10 6 51.151 0.0 0.0 3.4407 0.0 0.0 327.14436932784616 0.0 327.14436932784616 0.0 31.977890027340976 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.6989700043360187 ADQQAEEE{I|L}Q 3.4407 - 1035 + 1 1.892 73519.0 0.550000011920929 3234 3414 6638 DOHH2_400M_050219_2,6650 DOHH2_400M_050219_2,6650,FAMEQREEERY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6651 35.797 266.0 239160.0 25 0 27777.0 -1 0 99 561.3118160472051 560.304539580605 1 561.3123657107353 MULTI CID FTMS 0 0 0 6638 147418.453125 0.0731166027875439 4 -0.4601593017578125 13 2 KY 2 -1 14.693 0.0 0.0 2.6223 0.0 0.0 251.1360653147832 0.0 251.1360653147832 0.0 10.088643834802156 0.0 0.0 0 0.0 0.0 0.0 0.0 KY 2.6223 - 25 + 1 1.892 53435.7 1.0 3235 3414 6638 DOHH2_400M_050219_2,6651 DOHH2_400M_050219_2,6651, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6652 35.803 321.0 190870.0 25 0 13792.0 19603 LGAISPVLN 9 103 442.2645654020508 0 442.2652465701103 PEAK CID FTMS 0 0 0 6638 105942.859375 0.9816768001329684 1 -0.1066246032714843 14 Unmodified _LGAISPVLN_ ENSG00000165650|ENST00000334464|PDZD8 12.531546534597751 0.2832320739326029 2 KD 2 9 9.464 0.0 0.0 1.0724 0.0 0.0 554.2972449625016 82.06693445377186 636.3641794162735 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KD 1.0724 - 27 + 1 1.892 53338.4 1.0 3236 3414 6638 DOHH2_400M_050219_2,6652 DOHH2_400M_050219_2,6652,LGAISPVLN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6653 35.809 332.0 205200.0 25 0 8368.6 + 38054 TPETKIMVP 9 114 508.2776279697644 1014.5407030063288 2 508.7802917361259 MULTI CID FTMS 0 0 0 6638 104571.40625 0.1401336122589465 14 -1.0369377136230469 15 Unmodified _TPETKIMVP_ REV__ENSG00000120685|ENST00000352251|PROSER1;REV__nc|ENSG00000120685|Q86XN7-2|PROSER1 15.847184025352805 0.4077185912009129 2 GTPQ 4 -1 30.433 0.0 0.0 2.9997 0.0 0.0 613.3543568341812 0.0 613.3543568341812 0.0 7.846244012538378 0.0 0.0 0 0.0 0.0 0.0 0.0 GTPQ 2.9997 - 243 1 1.892 58262.1 1.0 3237 3414 6638 DOHH2_400M_050219_2,6653 DOHH2_400M_050219_2,6653,TPETKIMVP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6655 35.814 164.0 437600.0 25 0 36359.0 -1 0 68 881.9126736032672 1761.8107942733343 2 881.9132568240166 MULTI CID FTMS 0 0 0 6654 436587.5625 0.3672212186060967 3 -0.3535346984863281 1 2 {I|L}N[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 14 -1 74.747 0.0 0.0 4.2426 0.0 0.0 211.09634596992345 0.0 211.09634596992345 0.0 55.66163363542282 0.0 0.0 0 1.305462187404089 0.0 0.0 0.805462187404089 {I|L}N[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.2426 - 714 1 1.892 52959.1 1.0 3238 3415 6654 DOHH2_400M_050219_2,6655 DOHH2_400M_050219_2,6655, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6656 35.82 287.0 356210.0 25 0 45022.0 + 26393 NTDLMTSQCY 10 135 588.2384720304343 1174.4623911276683 2 588.2394286990166 MULTI CID FTMS 0 0 0 6654 228311.328125 0.0492670839649209 4 -0.4908409118652344 2 Unmodified _NTDLMTSQCY_ REV__ENSG00000197121|ENST00000354764|PGAP1;REV__ENST00000470179.5_1_2:197712669-197791463:-|nuORF;REV__nc|ENSG00000197121|Q75T13-2|PGAP1;REV__nc|ENSG00000197121|Q75T13-3|PGAP1;REV__nc|ENSG00000197121|Q75T13-4|PGAP1 22.736283301280096 0.4578556481593033 2 [NS]E{I|L} 4 -1 45.963 0.0 0.0 3.9135 0.0 0.0 0.0 728.2387332509685 728.2387332509685 10.741552191897313 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.909097005026964 0.9436726795685342 [NS]E{I|L} 3.9135 - 360 1 1.892 82341.1 1.0 3239 3415 6654 DOHH2_400M_050219_2,6656 DOHH2_400M_050219_2,6656,NTDLMTSQCY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6657 35.821 54.0 1613000.0 25 0 114560.0 + 31673 RRKDGVFLY 9 95 385.2207546735995 1152.6404346209986 3 385.2206603884697 MULTI CID FTMS 0 0 0 6654 860546.75 0.7813985047541951 -1 0.1066246032714843 3 Unmodified _RRKDGVFLY_ ENSG00000125691|ENST00000479035|RPL23;ENST00000320371.6_1_21:30369936-30370179:-|nuORF;ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENST00000584912.5_1_17:37006588-37006753:-|nuORF 16.565877749689598 0.3882643987948875 2 R{M(Oxidation (M))|F}{I|L}Y 4 5 36.714 0.0 0.0 3.1853 0.0 0.0 555.3243686242783 0.0 555.3243686242783 0.0 25.74539712336197 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.3494850021680094 R{M(Oxidation (M))|F}{I|L}Y 3.1853 - 38 1 1.892 72541.9 1.0 3240 3415 6654 DOHH2_400M_050219_2,6657 DOHH2_400M_050219_2,6657,RRKDGVFLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6658 35.823 110.0 750610.0 25 0 176920.0 + 35347 STDKFKTDFY 10 93 417.86775343169137 0 417.8679382205009 PEAK CID FTMS 0 0 0 6654 407529.5625 1.0 0 0.0 4 Unmodified _STDKFKTDFY_ ENSG00000168090|ENST00000303904|COPS6 31.26834338654808 0.2038683672476779 2 RS 2 10 7.9588 0.0 0.0 0.95461 0.0 0.0 99.358174244439 488.2159517877563 587.5741260321953 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 RS 0.95461 - 68 + 1 1.892 69737.8 1.0 3241 3415 6654 DOHH2_400M_050219_2,6658 DOHH2_400M_050219_2,6658,STDKFKTDFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6659 35.826 158.0 471830.0 25 0 65160.0 + 26388 NTDHQTQLLY 10 71 616.7983856575039 1231.5822183818077 2 616.7992431521416 MULTI CID FTMS 0 0 0 6654 401737.4375 0.0891648378147972 -1 0.1066246032714843 5 Unmodified _NTDHQTQLLY_ ENSG00000051180|ENST00000267868|RAD51;nc|ENSG00000051180|Q06609-2|RAD51;nc|ENSG00000051180|Q06609-3|RAD51;nc|ENSG00000051180|Q06609-4|RAD51 59.36838082759317 0.0382430275470746 2 QTQ{I|L}{I|L}Y 6 4 77.013 0.0 0.0 6.2532 0.0 0.0 467.1761646955094 0.0 467.1761646955094 0.0 53.99797211252192 0.0 0.0 0 1.0 0.0 1.086696871556164 1.1989700043360187 + QTQ{I|L}{I|L}Y 6.2532 + + 130 1 1.892 59486.0 1.0 3242 3415 6654 DOHH2_400M_050219_2,6659 DOHH2_400M_050219_2,6659,NTDHQTQLLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6660 35.829 117.0 622640.0 25 0 45247.0 + 39283 VADKVHLMY 9 110 359.1921426802144 1074.554598640843 3 359.1914245486259 MULTI CID FTMS 0 0 0 6654 350786.25 0.515679464278003 -1 0.1066246032714843 6 Unmodified _VADKVHLMY_ ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF 15.847184025352805 0.4077185912009129 2 DG{I|L}MY 5 5 22.012 0.0 0.0 2.0485 0.0 0.0 477.30650527168126 0.0 477.30650527168126 0.0 6.52733298573045 0.0 0.0 0 0.6069758080123702 0.0 0.0 0.0 DG{I|L}MY 2.0485 - 161 1 1.892 66160.7 1.0 3243 3415 6654 DOHH2_400M_050219_2,6660 DOHH2_400M_050219_2,6660,VADKVHLMY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6661 35.836 376.0 325540.0 25 0 13286.0 + 39284 VADKVHLMY 9 125 538.2829983590779 1074.5514437849556 2 538.2841674685478 MULTI CID FTMS 0 0 0 6654 213394.59375 0.4467070157569477 -1 0.1066246032714843 7 Unmodified _VADKVHLMY_ ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF 63.960520009940105 0.0238892913700936 2 VADKVH{I|L}MY 9 0 + 78.0 0.0 0.0 7.2588 7.2588 82.688 0.0 0.0 0.0 2.3771590425463245 2.3771590425463245 2.3771590425463245 2.3771590425463245 0 2.417735320183944 2.0 0.0 0.0 + + VADKVH{I|L}MY;{[VA]|[{I|L}G]}DKHV{I|L}MY;{[VA]|[{I|L}G]}DKH{I|L}VMY;{[VA]|[{I|L}G]}DHKV{I|L}MY;VA[WR]H{I|L}MY;{[VA]|[{I|L}G]}DKH{I|L}MVY;{[VA]|[{I|L}G]}DHK{I|L}VMY;VADKV{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[VA]|[{I|L}G]}DHK{I|L}MVY;[H{I|L}]TQ{I|L}G{I|L}MY 7.2588;7.0376;6.4888;6.1159;5.6838;5.5794;5.5671;4.6665;4.6578;4.5172 +;-;-;-;-;-;-;-;-;- + 1910 + 1 1.892 101475.4 1.0 3244 3415 6654 DOHH2_400M_050219_2,6661 DOHH2_400M_050219_2,6661,VADKVHLMY True True VADKVHLMY 35.835559 538.284167468548 8087008.5 6654.0 ENSG00000121060|ENST00000316881|TRIM25;;ENST00000572021.5_1_17:54969063-54989474:-|nuORF 6.86946964263916 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6662 35.849 800.0 204180.0 25 0 10559.0 + 7726 ELDPMAMTQKY 11 146 671.8043409657508 1341.5941289983016 2 671.8047973513603 MULTI CID FTMS 0 0 0 6654 188321.21875 0.7107160067393421 2 -0.2612075805664062 8 Oxidation (M) _ELDPM(Oxidation (M))AMTQKY_ ENSG00000087365|ENST00000322535|SF3B2;ENST00000534765.1_1_11:65835264-65836005:+|nuORF 59.05245873256422 0.0729907235015292 2 {[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}AMTQKY 11 0 + 81.987 0.0 0.0 6.1112 6.1112 80.155 0.0 0.0 0.0 27.367585652254192 6.627578316815743 6.627578316815743 3.0102999566398125 0 0.6109243748081782 2.0 0.0 0.9916440611282626 + + {[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}AMTQKY;{[QN]|[E{I|L}]|[KN]}DPMSMTQKY;{[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}SDTQKY;{[QN]|[E{I|L}]|[KN]}DPMA{M(Oxidation (M))|F}TQKY;{[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}AMTQYK;{[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}AMT[AG]KY;{[QN]|[E{I|L}]|[KN]}DPMSMTQYK;{[QN]|[E{I|L}]|[KN]}DP{M(Oxidation (M))|F}SDTQYK;{[QN]|[E{I|L}]|[KN]}DPMSMT[AG]KY;{[QN]|[E{I|L}]|[KN]}DPMA{M(Oxidation (M))|F}TQYK 6.1112;5.8868;5.8559;5.6965;5.6171;5.4307;5.3928;5.3619;5.2064;5.2025 +;-;-;+;-;-;-;-;-;- + 4705 + 1 1.892 124452.3 0.800000011920929 3245 3415 6654 DOHH2_400M_050219_2,6662 DOHH2_400M_050219_2,6662,ELDPMAMTQKY True False ELDPMAMTQKY 35.849396 671.80479735136 3586245.0 6654.0 ENST00000534765.1_1_11:65835264-65836005:+|nuORF;;ENSG00000087365|ENST00000322535|SF3B2 6.391804377237956 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6663 35.857 424.0 452740.0 25 0 105390.0 + 31674 RRKDGVFLY 9 137 577.3276682256035 1152.6407835180069 2 577.3279907107353 MULTI CID FTMS 0 0 0 6654 163068.203125 0.655552624223066 -1 0.1066246032714843 9 Unmodified _RRKDGVFLY_ ENSG00000125691|ENST00000479035|RPL23;ENST00000320371.6_1_21:30369936-30370179:-|nuORF;ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENST00000584912.5_1_17:37006588-37006753:-|nuORF 45.739877483867886 0.0497104363764649 2 R{M(Oxidation (M))|F}{I|L}Y 4 5 52.735 0.0 0.0 4.5752 0.0 0.0 555.3251184996492 0.0 555.3251184996492 0.0 43.69402840463316 0.0 0.0 0 1.2059771852360797 0.0 0.0 1.174742501084005 R{M(Oxidation (M))|F}{I|L}Y 4.5752 - 166 1 1.892 146044.6 1.0 3246 3415 6654 DOHH2_400M_050219_2,6663 DOHH2_400M_050219_2,6663,RRKDGVFLY True True RRKDGVFLY 35.856958 577.327990710735 11067934.625 6654.0 ENST00000584583.1_1_17:37006387-37006753:-|nuORF;;ENST00000584912.5_1_17:37006588-37006753:-|nuORF;;ENST00000320371.6_1_21:30369936-30370179:-|nuORF;;ENSG00000125691|ENST00000479035|RPL23 6.866699695587158 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6664 35.868 618.0 363140.0 25 0 78924.0 + 31774 RSGVIVRL 8 138 450.2930987284042 898.5716445236084 2 450.2929870486259 MULTI CID FTMS 0 0 0 6654 139107.265625 0.9966272226310686 -1 0.1066246032714843 10 Unmodified _RSGVIVRL_ ENSG00000155561|ENST00000285968|NUP205 34.40172386719151 0.3279500639400574 2 [VG]SR{I|L}VR{I|L} 8 4 + 41.621 0.0 0.0 4.6319 4.6319 72.333 0.0 0.0 0.0 11.54901959985743 1.4146195466837952 1.4146195466837952 1.4146195466837952 0 1.6989700043360187 1.154901959985743 0.0 0.5 [VG]SR{I|L}VR{I|L};[VG]SR{I|L}V{I|L}R;RS[VG]{I|L}VR{I|L};RS[VG]{I|L}V{I|L}R;[VG]SR{I|L}RV{I|L};RS[VG]{I|L}RV{I|L} 4.6319;4.4745;3.3466;3.1892;3.0762;1.7909 -;-;+;-;-;- + 188 + 1 1.892 178651.0 1.0 3247 3415 6654 DOHH2_400M_050219_2,6664 DOHH2_400M_050219_2,6664,RSGVIVRL False True RSGVIVRL 35.867742 450.292987048626 1505300.75 6654.0 ENSG00000155561|ENST00000285968|NUP205 2.512726883093516 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6665 35.874 357.0 424310.0 25 0 32933.0 + 4715 DEARDLIQRY 10 117 426.8859702978655 1277.6360814937966 3 426.8862487673759 MULTI CID FTMS 0 0 0 6654 120020.4453125 0.3287502667430995 -1 0.1066246032714843 11 Unmodified _DEARDLIQRY_ ENSG00000174231|ENST00000304992|PRPF8 74.19965305603844 0.0188013450058842 2 DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}QRY 10 0 + 81.819 0.0 0.0 6.4039 6.4039 81.802 0.0 0.0 0.0 68.3242875261555 12.01667520279372 12.01667520279372 3.521825181113627 0 1.3807196863200843 2.0 0.0 0.9698565171985376 + + DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}QRY;DE[WR]{I|L}{I|L}QRY;DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}[AG]RY;DE[WR]{I|L}{I|L}[AG]RY 6.4039;6.1283;5.6866;5.4076 +;-;-;- + 179 + 1 1.892 131627.7 1.0 3248 3415 6654 DOHH2_400M_050219_2,6665 DOHH2_400M_050219_2,6665,DEARDLIQRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6666 35.889 800.0 272610.0 25 0 28211.0 + 7325 EEYMNKPTF 9 186 579.7608348372702 1157.5071167413405 2 579.7612792849541 MULTI CID FTMS 0 0 0 6654 112921.96875 0.6342043024236729 -1 0.1066246032714843 12 Unmodified _EEYMNKPTF_ ENSG00000152056|ENST00000396654|AP1S3 111.28704002717404 0.0050101734347035 2 EEYMNKPT{M(Oxidation (M))|F} 9 0 + 94.937 0.0 0.0 8.2018 8.2018 92.634 0.0 0.0 0.0 27.147642715192504 18.528647428193903 18.528647428193903 9.208187539523747 0 0.7302046884880937 2.0 1.4431890546242343 1.0629529932484498 + + EEYMNKPT{M(Oxidation (M))|F};EEYMGGKPT{M(Oxidation (M))|F};EEYMNK[MT]{I|L};EEYMGGK[MT]{I|L};EEYMN[RV]A{M(Oxidation (M))|F};{[TV]|[{I|L}S]}YKNMY[HC];EEYMGG[RV]A{M(Oxidation (M))|F};{[TV]|[{I|L}S]}YKGGMY[HC];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NK{[TV]|[{I|L}S]}Y[HC];EEY{[TV]|[{I|L}S]}KC(Carbamidomethyl (C)){[ET]|[MV]} 8.2018;7.4063;6.6011;5.8056;4.9913;4.9725;4.1958;4.177;3.528;3.4443 +;-;-;-;-;-;-;-;-;- + 1218 + 1 1.892 163166.2 0.6200000047683716 3249 3415 6654 DOHH2_400M_050219_2,6666 DOHH2_400M_050219_2,6666,EEYMNKPTF True True EEYMNKPTF 35.889179 579.761279284954 1377623.25 6654.0 ENSG00000152056|ENST00000396654|AP1S3 8.642027695973715 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6667 35.903 800.0 257520.0 25 0 25207.0 + 23363 LTDITKGVQY 10 194 569.3108407004488 1136.6071284676975 2 569.3129760622978 MULTI CID FTMS 0 0 0 6654 108136.0234375 0.0530017522798692 6 -0.6628913879394531 13 Unmodified _LTDITKGVQY_ ENSG00000167658|ENST00000309311|EEF2 33.4449034751529 0.2267874087365337 2 {I|L}TD{I|L}[SG]KQ{I|L}Y 10 4 + 55.544 0.0 0.0 4.8869 4.8869 79.256 0.0 0.0 0.0 28.71237886292167 11.668028008189085 11.668028008189085 6.409080081077981 0 1.3226825097560422 1.3979400086720375 0.0 0.5387254899964358 {I|L}TD{I|L}[SG]KQ{I|L}Y;{I|L}TD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KQ{I|L}Y;{I|L}TWWKQ{I|L}Y;{I|L}TD{I|L}[SG]KQY{I|L};{I|L}TD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KQY{I|L};{I|L}TWWKQY{I|L};{I|L}TD{I|L}[EP][H{I|L}]S{I|L};{I|L}[KA]{I|L}[WQ]C{I|L}Y;{I|L}TD{I|L}[EP][H{I|L}]{I|L}S;{[QN]|[E{I|L}]|[KN]}S[RK]T[HA][VP] 4.8869;4.323;3.8428;3.6136;3.0498;2.5696;2.2418;2.0273;1.998;1.3781 -;-;-;-;-;-;-;-;-;- 2088 + 1 1.892 154678.3 0.550000011920929 3250 3415 6654 DOHH2_400M_050219_2,6667 DOHH2_400M_050219_2,6667,LTDITKGVQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6668 35.912 496.0 165070.0 25 0 13971.0 -1 CILMITEL 8 126 476.24902520872325 0 476.2484313845634 PEAK CID FTMS 0 0 0 6654 90838.15625 1.0 0 0.0 14 Oxidation (M) _CILM(Oxidation (M))ITEL_ ENSG00000128590|ENST00000249356|DNAJB9;ENST00000465725.1_1_7:108212170-108215134:+|nuORF;ENST00000491582.1_1_7:108210452-108212392:+|nuORF 20.871210003555333 0.4015059659087983 2 E 1 -1 8.0989 0.0 0.0 0.85209 0.0 0.0 131.09105471256527 687.3237398736936 818.414794586259 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E 0.85209 + + 38 + 1 1.892 67022.1 1.0 3251 3415 6654 DOHH2_400M_050219_2,6668 DOHH2_400M_050219_2,6668,CILMITEL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6669 35.927 800.0 378430.0 25 0 117160.0 -1 0 100 684.3940522643453 683.3867757977453 1 684.3934203982353 MULTI CID FTMS 0 0 0 6654 198935.25 0.855043331886083 -1 0.1066246032714843 15 2 {[QN]|[E{I|L}]|[KN]}{I|L}VPN 6 -1 + 56.246 0.0 0.0 8.2305 8.2305 89.472 0.0 0.0 0.0 11.103261299483911 9.420080530223132 9.420080530223132 6.7609125905568135 0 1.3494850021680094 1.0969100130080565 0.2396518287104437 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}VPN;{[QN]|[E{I|L}]|[KN]}{I|L}PVN;{[QN]|[E{I|L}]|[KN]}V{I|L}PN;[{I|L}V]E{I|L}PN;[{I|L}V]{I|L}EPN;{[QN]|[E{I|L}]|[KN]}P{I|L}VN;[VP][KQ]VN;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}VP;[NP][K{I|L}]VN 8.2305;7.2411;6.9614;6.6057;5.3235;5.0323;2.4638;1.8398;1.2772 -;-;-;-;-;-;-;-;- 107 1 1.892 217771.1 0.7699999809265137 3252 3415 6654 DOHH2_400M_050219_2,6669 DOHH2_400M_050219_2,6669, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6670 35.93 178.0 366170.0 25 0 26704.0 -1 0 101 378.2487272605279 377.2414507939279 1 378.2321349978447 MULTI CID FTMS 0 0 0 6654 101860.1640625 0.3229217429812495 1 -0.1624717712402343 16 2 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 3.5772 0.0 0.0 212.16227096169973 0.0 212.16227096169973 0.0 2.074866739854091 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 3.5772 - 23 + 1 1.892 56155.1 1.0 3253 3415 6654 DOHH2_400M_050219_2,6670 DOHH2_400M_050219_2,6670, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6671 35.944 800.0 148160.0 25 0 11347.0 + -1 ILCDCNFFY 9 148 597.7513097891464 1193.4880666450929 2 597.7516967654228 MULTI CID FTMS 0 0 0 6654 150345.5 1.0 0 0.0 17 Carbamidomethyl (C) _ILC(Carbamidomethyl (C))DCNFFY_ REV__ENSG00000167210|ENST00000642948|LOXHD1;REV__nc|ENSG00000167210|Q8IVV2-3|LOXHD1;REV__nc|ENSG00000167210|Q8IVV2-4|LOXHD1;REV__nc|ENSG00000167210|Q8IVV2-5|LOXHD1;REV__nc|ENSG00000167210|Q8IVV2|LOXHD1 12.531546534597751 0.4974689918368763 2 TY{M(Oxidation (M))|F}[QA] 5 -1 21.739 0.0 0.0 1.8215 0.0 0.0 565.2120228498062 0.0 565.2120228498062 0.0 -0.0269751594335332 -0.0269751594335332 0.0 0 0.0 0.0 0.7302046884880937 0.0 TY{M(Oxidation (M))|F}[QA] 1.8215 - 218 1 1.892 90664.1 0.699999988079071 3254 3415 6654 DOHH2_400M_050219_2,6671 DOHH2_400M_050219_2,6671,ILCDCNFFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6672 35.959 800.0 85377.0 25 0 4205.0 -1 PFYYEMCWY 9 117 687.7635908163495 0 687.7637817263603 PEAK CID FTMS 0 0 0 6654 147297.125 1.0 0 0.0 18 Carbamidomethyl (C),Oxidation (M) _PFYYEM(Oxidation (M))C(Carbamidomethyl (C))WY_ ENSG00000089094|ENST00000377071|KDM2B;ENSG00000173120|ENST00000529006|KDM2A;ENST00000538503.5_1_12:121882954-121987523:-|nuORF;nc|ENSG00000089094|Q8NHM5-2|KDM2B;nc|ENSG00000089094|Q8NHM5-3|KDM2B;nc|ENSG00000089094|Q8NHM5-4|KDM2B;nc|ENSG00000089094|Q8NHM5-5|KDM2B;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-3|KDM2A 5.230669730166228 0.3444685223463734 2 YSM 3 -1 12.285 0.0 0.0 0.8944 0.0 0.0 727.2335892481302 262.12055383853755 989.3541430866678 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 YSM 0.8944 - 60 + 1 1.892 52508.0 0.699999988079071 3255 3415 6654 DOHH2_400M_050219_2,6672 DOHH2_400M_050219_2,6672,PFYYEMCWY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6673 35.967 451.0 254700.0 25 0 38717.0 + 12361 GTEFGPGTAY 10 132 500.2249457538201 998.4353385744404 2 500.2245056033134 MULTI CID FTMS 0 0 0 6654 134136.875 1.0 0 0.0 19 Unmodified _GTEFGPGTAY_ ENSG00000097033|ENST00000370558|SH3GLB1;nc|ENSG00000097033|Q9Y371-2|SH3GLB1;nc|ENSG00000097033|Q9Y371-3|SH3GLB1 25.399314129420983 0.3980215340001851 2 {[SA]|[TG]}PGA 5 5 18.71 0.0 0.0 1.874 0.0 0.0 0.0 612.2317917817246 612.2317917817246 0.1268483051186244 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.5 0.0 {[SA]|[TG]}PGA 1.874 - 268 1 1.892 94304.7 1.0 3256 3415 6654 DOHH2_400M_050219_2,6673 DOHH2_400M_050219_2,6673,GTEFGPGTAY False True GTEFGPGTAY 35.967072 500.224505603313 1474040.5 6654.0 nc|ENSG00000097033|Q9Y371-3|SH3GLB1;;nc|ENSG00000097033|Q9Y371-2|SH3GLB1;;ENSG00000097033|ENST00000370558|SH3GLB1 3.7715306282043457 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6674 35.971 216.0 285910.0 25 0 53242.0 11494 GIKTSGKVVYF 11 103 400.2323762865572 0 400.2319824099541 PEAK CID FTMS 0 0 0 6654 93884.3125 0.948558138888731 1 -0.1624717712402343 20 Unmodified _GIKTSGKVVYF_ ENSG00000165970|ENST00000525748|SLC6A5;nc|ENSG00000165970|Q9Y345-2|SLC6A5;nc|ENSG00000165970|Q9Y345-3|SLC6A5 2.9952420565917617 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.892 53233.3 1.0 3257 3415 6654 DOHH2_400M_050219_2,6674 DOHH2_400M_050219_2,6674,GIKTSGKVVYF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6676 35.976 16.0 2570300.0 25 0 175440.0 + 6333 DVKGRIYQL 9 75 546.3142445473059 0 546.3143798708916 PEAK CID FTMS 0 0 0 6675 1937766.375 0.2038380210685366 1 -0.0987358093261718 1 Unmodified _DVKGRIYQL_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000536090.1_1_12:6626539-6627126:+|nuORF;ENST00000542472.1_1_12:6626979-6631036:+|nuORF 43.77239144664712 0.0487019148086553 2 VK{I|L} 3 6 20.947 0.0 0.0 1.9207 0.0 0.0 115.02744892717858 632.3183077447874 747.345756671966 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.4247425010840047 VK{I|L} 1.9207 - 42 + 1 1.89 36287.6 1.0 3258 3416 6675 DOHH2_400M_050219_2,6676 DOHH2_400M_050219_2,6676,DVKGRIYQL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6677 35.977 37.0 1627600.0 25 0 209150.0 + 20142 LKPGILPVPK 10 79 531.3576326146177 1060.7007122960354 2 531.3580200076103 MULTI CID FTMS 0 0 0 6675 1262962.75 0.3681998990845969 1 -0.0987358093261718 2 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 18.721224879955976 0.5334180411911432 2 K{I|L}A[{I|L}P]VKD{I|L} 9 -1 67.278 0.0 0.0 6.3428 0.0 0.0 0.0 80.05127130679921 80.05127130679921 47.89233934604914 0.0 0.0 0.0 0 2.3494850021680094 0.0 0.6694451763165201 0.0 K{I|L}A[{I|L}P]VKD{I|L} 6.3428 - 204 + 1 1.89 53614.6 1.0 3259 3416 6675 DOHH2_400M_050219_2,6677 DOHH2_400M_050219_2,6677,LKPGILPVPK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6678 35.978 9.8 4912500.0 25 0 335600.0 + 2688 ATEDPWKTNY 10 71 612.7801090649566 1223.5456651967131 2 612.7804443240166 MULTI CID FTMS 0 0 0 6675 5754296.0 0.1928887189904762 -2 0.2690963745117187 3 Unmodified _ATEDPWKTNY_ ENSG00000139684|ENST00000378720|ESD 53.40400417844725 0.0601721406801337 2 [PG]E[Q{I|L}]WPD 8 8 42.159 0.0 0.0 3.4456 0.0 0.0 0.0 298.1044169879819 298.1044169879819 2.9014429721864587 0.0 0.0 0.0 0 0.9247425010840048 0.8239087409443188 0.3807196863200844 0.75 [PG]E[Q{I|L}]WPD 3.4456 - 278 1 1.89 40983.6 1.0 3260 3416 6675 DOHH2_400M_050219_2,6678 DOHH2_400M_050219_2,6678,ATEDPWKTNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6679 35.98 73.0 851590.0 25 0 75732.0 + 43509 WWWWIWWQWW 10 66 874.9037639281709 1747.7929749231416 2 874.9048950076103 MULTI CID FTMS 0 0 0 6675 802506.3125 0.3085295989050649 8 -0.6176185607910156 4 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 2 QDAN{I|L}DP{[QN]|[E{I|L}]|[KN]} 9 8 59.531 0.0 0.0 3.4061 0.0 0.0 734.3622914044937 0.0 734.3622914044937 0.0 41.58539067949008 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.8494850021680094 QDAN{I|L}DP{[QN]|[E{I|L}]|[KN]} 3.4061 - 202 1 1.89 50019.1 1.0 3261 3416 6675 DOHH2_400M_050219_2,6679 DOHH2_400M_050219_2,6679,WWWWIWWQWW False True False False splicing PXD020620_cell_line DOHH2_400M_050219_2 6680 35.981 68.0 837890.0 25 0 204620.0 + 45281 YSDKYGLGY 9 76 533.2479606977075 1064.481368462215 2 533.2479736208916 MULTI CID FTMS 0 0 0 6675 684831.8125 0.0286068721350596 10 -0.7246665954589844 5 Unmodified _YSDKYGLGY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 43.77239144664712 0.0547478964384323 2 YSDK 4 5 52.524 0.0 0.0 4.9342 0.0 0.0 0.0 568.2416475885374 568.2416475885374 11.38689707366744 0.0 0.0 0.0 0 0.7614393726401688 1.5228787452803376 0.4247425010840047 0.0 + YSDK 4.9342 + + 576 + 1 1.89 50990.3 1.0 3262 3416 6675 DOHH2_400M_050219_2,6680 DOHH2_400M_050219_2,6680,YSDKYGLGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6681 35.983 68.0 782600.0 25 0 90672.0 + -1 LPKTGTVSL 9 73 458.2781646281703 457.2708881615703 1 458.2787353396416 MULTI CID FTMS 0 0 0 6675 678099.0625 1.0 0 0.0 6 ENSG00000169710|ENST00000306749|FASN 2 S{I|L} 2 -1 17.691 0.0 0.0 3.8688 0.0 0.0 239.1435515910609 0.0 239.1435515910609 0.0 13.253800256993951 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 S{I|L} 3.8688 - 16 + 1 1.89 48326.9 1.0 3263 3416 6675 DOHH2_400M_050219_2,6681 DOHH2_400M_050219_2,6681, False False LPKTGTVSL 35.983074 458.278735339642 4411059.5 6675.0 ENSG00000169710|ENST00000306749|FASN 1.7293794353802998 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6682 35.986 149.0 487400.0 25 0 62378.0 + 14110 ALPSHVVTM 9 87 477.7575544233334 953.5005559134668 2 477.7574645876884 MULTI CID FTMS 0 0 0 6675 407113.25 0.5328806416807642 -1 0.1624717712402343 7 Unmodified _IATHPTAFP_ ENSG00000062485|ENST00000351328|CS;ENST00000547912.1_1_12:56676173-56676410:-|nuORF;ENST00000547449.1_1_12:56676173-56676733:-|nuORF;ENST00000546621.5_1_12:56668606-56679804:-|nuORF 27.628801355627647 0.1796483985696185 2 [{I|L}A][YR]VTTM 8 6 + 43.65 0.0 0.0 4.5779 4.5779 83.27 0.0 0.0 0.0 9.87317816678518 14.904630595263413 9.87317816678518 10.445312593723983 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}A][YR]VTTM;[{I|L}A][YT]RVTM;[{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}[K{I|L}]TM;[{I|L}A][YT]A{I|L}[R{M(Oxidation (M))|F}] 4.5779;3.4824;3.2428;2.2724 -;-;-;- 314 + 1 1.89 59471.1 1.0 3264 3416 6675 DOHH2_400M_050219_2,6682 DOHH2_400M_050219_2,6682,IATHPTAFP False False ALPSHVVTM 35.98603 477.757464587688 3842657.25 6675.0 ENSG00000062485|ENST00000351328|CS;;ENST00000547912.1_1_12:56676173-56676410:-|nuORF;;ENST00000547449.1_1_12:56676173-56676733:-|nuORF;;ENST00000546621.5_1_12:56668606-56679804:-|nuORF 4.352923234303792 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6683 35.988 94.0 594540.0 25 0 57165.0 + 5522 DMASRVQL 8 90 460.2353385236985 918.456124114197 2 460.2345153689384 MULTI CID FTMS 0 0 0 6675 338421.78125 1.0 0 0.0 8 Unmodified _DMASRVQL_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 19.256988751693697 0.6264283240490721 2 [MD]A 3 5 37.76 0.0 0.0 4.1112 0.0 0.0 0.0 598.3323418172937 598.3323418172937 25.541134294324124 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + [MD]A 4.1112 + + 34 + 1 1.89 47240.7 1.0 3265 3416 6675 DOHH2_400M_050219_2,6683 DOHH2_400M_050219_2,6683,DMASRVQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6684 35.992 178.0 400660.0 25 0 30759.0 + 23572 LTMLLPYQL 9 111 364.54532526499634 1090.614146395189 3 364.5448181033134 MULTI CID FTMS 0 0 0 6675 287253.28125 0.2450596464953671 1 -0.0987358093261718 9 Unmodified _LTMLLPYQL_ REV__ENSG00000172772|ENST00000395079|OR10W1 14.838274106304384 0.4350285940865338 2 Q[DV]{I|L} 4 -1 22.892 0.0 0.0 2.099 0.0 0.0 617.3700731689519 0.0 617.3700731689519 0.0 10.90263930268895 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.3807196863200844 Q[DV]{I|L} 2.099 - 121 1 1.89 62108.5 1.0 3266 3416 6675 DOHH2_400M_050219_2,6684 DOHH2_400M_050219_2,6684,LTMLLPYQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6685 35.995 191.0 448240.0 25 0 50967.0 + 15989 ITDPDPDIRY 10 76 602.7961003620584 1203.577647790917 2 602.7965576052666 MULTI CID FTMS 0 0 0 6675 279351.5625 0.2209334455064199 -2 0.2690963745117187 10 Unmodified _ITDPDPDIRY_ ENSG00000198793|ENST00000361445|MTOR 43.9818466556824 0.1155196613165264 2 {I|L}TDPD[DP]{I|L}[YR] 10 0 + 67.797 0.0 0.0 5.6329 5.6329 84.199 0.0 0.0 0.0 42.33919093648403 8.066884185923655 8.066884185923655 8.603380065709928 0 0.7614393726401688 1.6989700043360187 0.0 0.3807196863200844 + + {I|L}TDPD[DP]{I|L}[YR];{I|L}TDPD[DP][YR]{I|L};{I|L}TDPD[DP][HV][VP] 5.6329;4.9181;4.3427 +;-;- + 108 + 1 1.89 65532.4 1.0 3267 3416 6675 DOHH2_400M_050219_2,6685 DOHH2_400M_050219_2,6685,ITDPDPDIRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6686 36.002 364.0 309140.0 25 0 73223.0 + 4716 DEARDLIQRY 10 90 639.8254114755529 1277.6362700179056 2 639.8254882693291 MULTI CID FTMS 0 0 0 6675 260983.96875 1.0 0 0.0 11 Unmodified _DEARDLIQRY_ ENSG00000174231|ENST00000304992|PRPF8 68.75988807550267 0.0189765623365881 2 DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}QRY 10 0 + 103.06 0.0 0.0 8.0663 8.0663 85.58 0.0 0.0 0.0 72.61230030668848 14.146518864155126 14.146518864155126 3.521825181113627 0 2.774227503252014 2.0 0.0 1.274227503252014 + + DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}QRY;DE[WR]{I|L}{I|L}QRY;DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}[AG]RY;DE[WR]{I|L}{I|L}[AG]RY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR]{I|L}{I|L}QRY;DE{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}[RH][PG];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR]{I|L}{I|L}[AG]RY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR]{I|L}{I|L}Q[VG]Y;[TA][RH]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}QRY;[TA][RH]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QRY 8.0663;7.7906;7.349;7.0699;4.615;4.5451;3.8943;3.8943;2.2225;1.9424 +;-;-;-;-;-;-;-;-;- + 244 + 1 1.89 88862.0 1.0 3268 3416 6675 DOHH2_400M_050219_2,6686 DOHH2_400M_050219_2,6686,DEARDLIQRY True True DEARDLIQRY 36.00178 639.825488269329 3790455.875 6675.0 ENSG00000174231|ENST00000304992|PRPF8 9.318510055541992 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6687 36.007 257.0 267250.0 25 0 29176.0 + 30562 RENYDIIKTY 10 78 657.8374330846447 1313.6603132360892 2 657.8384887576103 MULTI CID FTMS 0 0 0 6675 251025.5625 1.0 0 0.0 12 Unmodified _RENYDIIKTY_ ENSG00000169018|ENST00000306917|FEM1B 39.21299971606389 0.1658776112144286 2 [YE][RN]D{I|L}{I|L}KTY 10 2 + 78.121 0.0 0.0 5.9468 5.9468 91.982 0.0 0.0 0.0 15.597718523607966 74.14197490877392 15.597718523607966 31.71726453653232 0 1.805462187404089 1.6989700043360187 0.3807196863200844 0.2614393726401688 [YE][RN]D{I|L}{I|L}KTY;[QA]{[HG]|PP}[NP]W{I|L}KTY 5.9468;3.5324 -;- 87 1 1.89 57941.1 1.0 3269 3416 6675 DOHH2_400M_050219_2,6687 DOHH2_400M_050219_2,6687,RENYDIIKTY False True RENYDIIKTY 36.006559 657.83848875761 2144857.75 6675.0 ENSG00000169018|ENST00000306917|FEM1B 7.63590129216512 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6688 36.02 800.0 270690.0 25 0 39020.0 + -1 DMDRVLLKY 9 187 584.8048581409016 0 584.8045532107353 PEAK CID FTMS 0 0 0 6675 191091.53125 1.0 0 0.0 13 Oxidation (M) _DM(Oxidation (M))DRVLLKY_ chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;ENSG00000213999|ENST00000424583|MEF2B;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;nc|ENSG00000213999|Q02080|MEF2B 30.7034409873982 0.1074204919720154 2 K{I|L}[{I|L}V]C(Carbamidomethyl (C))K 6 -1 28.135 0.0 0.0 2.4096 0.0 0.0 245.0708717037026 178.0515078180297 423.12237952173234 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.7742275032520141 K{I|L}[{I|L}V]C(Carbamidomethyl (C))K 2.4096 - 346 + 1 1.89 159725.7 0.800000011920929 3270 3416 6675 DOHH2_400M_050219_2,6688 DOHH2_400M_050219_2,6688,DMDRVLLKY False False DMDRVLLKY 36.020391 584.804553210735 766148.0625 6675.0 chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;;ENSG00000213999|ENST00000424583|MEF2B;;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;;chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;;nc|ENSG00000213999|Q02080|MEF2B 3.5466150442759194 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6689 36.027 377.0 251540.0 25 0 23520.0 15267 IPHPAIVT 8 120 424.2569295765193 0 424.2572509646416 PEAK CID FTMS 0 0 0 6675 164145.5625 0.9891843641068232 -1 0.1624717712402343 14 Unmodified _IPHPAIVT_ ENSG00000138795|ENST00000265165|LEF1;ENSG00000148737|ENST00000355995|TCF7L2;nc|ENSG00000138795|Q9UJU2-2|LEF1;nc|ENSG00000138795|Q9UJU2-3|LEF1;nc|ENSG00000138795|Q9UJU2-4|LEF1;nc|ENSG00000138795|Q9UJU2-5|LEF1;nc|ENSG00000138795|Q9UJU2-6|LEF1;nc|ENSG00000138795|Q9UJU2-7|LEF1;nc|ENSG00000148737|Q9NQB0-10|TCF7L2;nc|ENSG00000148737|Q9NQB0-11|TCF7L2;nc|ENSG00000148737|Q9NQB0-12|TCF7L2;nc|ENSG00000148737|Q9NQB0-13|TCF7L2;nc|ENSG00000148737|Q9NQB0-14|TCF7L2;nc|ENSG00000148737|Q9NQB0-15|TCF7L2;nc|ENSG00000148737|Q9NQB0-16|TCF7L2;nc|ENSG00000148737|Q9NQB0-17|TCF7L2;nc|ENSG00000148737|Q9NQB0-2|TCF7L2;nc|ENSG00000148737|Q9NQB0-3|TCF7L2;nc|ENSG00000148737|Q9NQB0-4|TCF7L2;nc|ENSG00000148737|Q9NQB0-5|TCF7L2;nc|ENSG00000148737|Q9NQB0-6|TCF7L2;nc|ENSG00000148737|Q9NQB0-7|TCF7L2;nc|ENSG00000148737|Q9NQB0-8|TCF7L2;nc|ENSG00000148737|Q9NQB0-9|TCF7L2 28.17323086031832 0.2634958848191769 2 S{I|L}KMAGG 7 7 23.308 0.0 0.0 2.7534 0.0 0.0 131.0928761569673 68.05135523013905 199.1442313871064 0.0 0.0 0.0 0.0 0 1.579689690656103 0.0 0.0 0.0 S{I|L}KMAGG 2.7534 - 133 + 1 1.89 75543.0 1.0 3271 3416 6675 DOHH2_400M_050219_2,6689 DOHH2_400M_050219_2,6689,IPHPAIVT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6690 36.031 173.0 219940.0 25 0 17775.0 19370 LEQRNEIL 8 82 507.7818878733329 1013.5492228134658 2 507.7823974490166 MULTI CID FTMS 0 0 0 6675 143241.234375 1.0 0 0.0 15 Unmodified _LEQRNEIL_ ENST00000472749.6_1_3:147108719-147109862:-|nuORF;ENST00000494569.5_1_3:147109748-147109862:-|nuORF 34.10243960390752 0.3329570729325616 2 PT[HV][R{M(Oxidation (M))|F}]{I|L} 7 7 21.343 0.0 0.0 2.1057 0.0 0.0 145.07120875272204 0.0 145.07120875272204 0.0 8.155075724862256 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 PT[HV][R{M(Oxidation (M))|F}]{I|L} 2.1057 - 84 + 1 1.89 35186.8 1.0 3272 3416 6675 DOHH2_400M_050219_2,6690 DOHH2_400M_050219_2,6690,LEQRNEIL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6691 36.039 478.0 378820.0 25 0 91470.0 + 24556 MLDSHEELY 9 154 568.7508780199802 0 568.7508422732353 PEAK CID FTMS 0 0 0 6675 116575.7890625 1.0 0 0.0 16 Unmodified _MLDSHEELY_ ENSG00000197102|ENST00000360184|DYNC1H1 26.88365393820708 0.1386685954232994 2 TD{I|L}TP[Y{M(Oxidation (M))|F}]T 8 8 18.938 0.0 0.0 1.6678 0.0 0.0 111.96725789367277 82.06697260074452 194.03423049441727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8283409326844267 0.0 TD{I|L}TP[Y{M(Oxidation (M))|F}]T 1.6678 - 717 + 1 1.89 138446.5 1.0 3273 3416 6675 DOHH2_400M_050219_2,6691 DOHH2_400M_050219_2,6691,MLDSHEELY False True MLDSHEELY 36.038991 568.750842273235 987185.9375 6675.0 ENSG00000197102|ENST00000360184|DYNC1H1 2.996123552322388 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6692 36.048 437.0 225670.0 25 0 27671.0 + 32902 SEINKPNFY 9 126 556.2745782313033 1110.5346035294065 2 556.2727538943291 MULTI CID FTMS 0 0 0 6675 117023.109375 0.0406561048980931 10 -0.7246665954589844 17 Unmodified _SEINKPNFY_ ENSG00000067334|ENST00000436063|DNTTIP2 34.10243960390752 0.1078313939113124 2 DT{I|L}NK[NP]{M(Oxidation (M))|F}Y 9 2 + 69.051 0.0 0.0 6.2178 6.2178 79.482 0.0 0.0 0.0 50.30033272627976 5.915149811213496 5.915149811213496 2.218487496163561 0 0.4247425010840047 2.0 0.0 0.2742275032520141 DT{I|L}NK[NP]{M(Oxidation (M))|F}Y;DT{I|L}NKT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;DT{I|L}EP{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}Y;DT{I|L}NK[NP]Y{M(Oxidation (M))|F};DT{I|L}GGK[NP]{M(Oxidation (M))|F}Y;DT{I|L}GGKT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;DT{I|L}NKT{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F};DT{I|L}NK[VG]{[DS]|[MA]|[CV]|TT}Y;DT{I|L}EP{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F};DT{I|L}GGK[NP]Y{M(Oxidation (M))|F} 6.2178;6.0181;5.6091;5.5012;5.3887;5.1889;5.0545;5.0292;4.8925;4.672 -;-;-;-;-;-;-;-;-;- 593 + 1 1.89 79777.2 1.0 3274 3416 6675 DOHH2_400M_050219_2,6692 DOHH2_400M_050219_2,6692,SEINKPNFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6693 36.051 163.0 404000.0 25 0 27796.0 + 33012 SENPTQSPW 9 115 523.2318070099321 1044.4490610866642 2 523.2329589724541 MULTI CID FTMS 0 0 0 6675 100167.4140625 1.0 0 0.0 18 Unmodified _SENPTQSPW_ ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 12.531546534597751 0.4974689918368763 2 EVD[NS]SPW 8 5 34.157 0.0 0.0 3.2703 0.0 0.0 112.05265102982668 0.0 112.05265102982668 0.0 23.31923231985587 0.0 0.0 0 0.0 0.0 0.0 0.0 EVD[NS]SPW 3.2703 - 411 + 1 1.89 57506.4 1.0 3275 3416 6675 DOHH2_400M_050219_2,6693 DOHH2_400M_050219_2,6693,SENPTQSPW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6694 36.056 267.0 308010.0 25 0 38103.0 + 13434 ALPSHVVTM 9 96 485.2803608437773 968.5461687543548 2 485.2792541384697 MULTI CID FTMS 0 0 0 6675 101843.3125 0.4248263096233218 3 -0.328369140625 19 Unmodified _HLPPLPAAPG_ ENSG00000062485|ENST00000351328|CS;ENST00000547912.1_1_12:56676173-56676410:-|nuORF;ENST00000547449.1_1_12:56676173-56676733:-|nuORF;ENST00000546621.5_1_12:56668606-56679804:-|nuORF 18.13498045792455 0.5432546531930572 2 [PA]{I|L} 3 8 29.437 0.0 0.0 3.0393 0.0 0.0 0.0 684.348481336639 684.348481336639 13.494850021680094 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [PA]{I|L} 3.0393 - 252 1 1.89 69449.7 1.0 3276 3416 6675 DOHH2_400M_050219_2,6694 DOHH2_400M_050219_2,6694,HLPPLPAAPG False False ALPSHVVTM 36.05609 485.27925413847 252860.46875 6675.0 ENSG00000062485|ENST00000351328|CS;;ENST00000547912.1_1_12:56676173-56676410:-|nuORF;;ENST00000547449.1_1_12:56676173-56676733:-|nuORF;;ENST00000546621.5_1_12:56668606-56679804:-|nuORF -0.4135869244734446 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6695 36.07 800.0 111390.0 25 0 7338.8 -1 WNQCVDENECL 11 137 705.2778291996723 1408.5411054661445 2 705.2772094607353 MULTI CID FTMS 0 0 0 6675 89671.875 0.6342704304097913 -1 0.1624717712402343 20 Carbamidomethyl (C) _WNQC(Carbamidomethyl (C))VDENECL_ ENSG00000166147|ENST00000316623|FBN1;ENST00000559133.5_3_15:48703189-48720097:-|nuORF 15.248480904072842 0.7179608125786238 2 [DP]D{M(Oxidation (M))|F}GGDY 8 -1 27.454 0.0 0.0 1.9491 0.0 0.0 0.0 539.2160071597569 539.2160071597569 3.068474227284561 0.0 0.0 0.0 0 0.0 1.154901959985743 1.0021934810768762 0.0 [DP]D{M(Oxidation (M))|F}GGDY 1.9491 - 3261 1 1.89 67657.6 0.5299999713897705 3277 3416 6675 DOHH2_400M_050219_2,6695 DOHH2_400M_050219_2,6695,WNQCVDENECL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6697 36.075 112.0 422870.0 25 0 49521.0 + 45385 YTADGKEVLEY 11 73 644.308475954619 1286.602398976038 2 644.3087036013603 MULTI CID FTMS 0 0 0 6696 475088.5625 0.411630208804905 2 -0.2296333312988281 1 Unmodified _YTADGKEVLEY_ ENSG00000196655|ENST00000533632|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889791-118894106:+|nuORF 30.43146612281011 0.3776625119172622 2 YTAD 4 7 50.037 0.0 0.0 3.8891 0.0 0.0 0.0 833.4010714166624 833.4010714166624 34.05114945941854 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + YTAD 3.8891 + + 180 + 1 1.89 39824.8 1.0 3278 3417 6696 DOHH2_400M_050219_2,6697 DOHH2_400M_050219_2,6697,YTADGKEVLEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6698 36.088 800.0 138080.0 25 0 5125.5 + 35348 STDKFKTDFY 10 153 626.297930669216 0 626.2964355349541 PEAK CID FTMS 0 0 0 6696 99921.6875 0.2200174940899646 2 -0.2296333312988281 2 Unmodified _STDKFKTDFY_ ENSG00000168090|ENST00000303904|COPS6 49.74193281347159 0.0502959109240587 2 DK{M(Oxidation (M))|F} 3 7 15.635 0.0 0.0 1.2502 0.0 0.0 188.07857510620696 669.2904146783811 857.3689897845882 0.0 0.0 0.0 0.0 0 0.5941876774005248 0.0 0.0 0.0 + DK{M(Oxidation (M))|F} 1.2502 + + 1522 + 1 1.89 88971.6 0.8299999833106995 3279 3417 6696 DOHH2_400M_050219_2,6698 DOHH2_400M_050219_2,6698,STDKFKTDFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6699 36.09 49.0 1315000.0 25 0 82626.0 + 8699 EVKPHALEL 9 107 518.2949937288331 1034.575434524466 2 518.2955200076103 MULTI CID FTMS 0 0 0 6696 939585.9375 1.0 0 0.0 3 Unmodified _EVKPHALEL_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 43.85829265575387 0.0542763391141878 2 E{I|L}A[QA]{I|L}E{I|L} 8 4 30.099 0.0 0.0 2.9093 0.0 0.0 149.1044998612711 0.0 149.1044998612711 0.0 4.156687756324686 0.0 0.0 0 0.3494850021680094 0.0 0.5 0.0 E{I|L}A[QA]{I|L}E{I|L} 2.9093 - 520 + 1 1.89 53490.5 1.0 3280 3417 6696 DOHH2_400M_050219_2,6699 DOHH2_400M_050219_2,6699,EVKPHALEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6700 36.092 83.0 643470.0 25 0 44324.0 + -1 ATMSLISAGRP 11 83 560.2941999821951 1118.57384703119 2 560.2948486208916 MULTI CID FTMS 0 0 0 6696 472376.78125 0.8886000381398208 -1 0.0987358093261718 4 Oxidation (M) _ATM(Oxidation (M))SLISAGRP_ REV__ENSG00000262576|ENST00000571252|PCDHGA4;REV__nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4 18.1463463914782 0.6576820063886638 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}RP 10 -1 + 54.43 0.0 0.0 4.866 4.866 82.036 0.0 0.0 0.0 26.982522177562203 12.01667520279372 12.01667520279372 9.164539485499256 0 0.0 0.0 0.8494850021680094 0.6549471895720984 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTGG{[VA]|[{I|L}G]}RP;[YV]{[CP]|[EA]}TN{[VA]|[{I|L}G]}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M[{I|L}A][C(Carbamidomethyl (C))K]RP 4.866;4.0467;2.1178;1.8463 -;-;-;- 121 + 1 1.89 45234.4 1.0 3281 3417 6696 DOHH2_400M_050219_2,6700 DOHH2_400M_050219_2,6700,ATMSLISAGRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6701 36.095 159.0 493890.0 25 0 62444.0 19182 LEERGEQW 8 99 523.7482865597614 1045.4820201863226 2 523.7493774294853 MULTI CID FTMS 0 0 0 6696 271303.4375 0.5917348067081604 -1 0.0987358093261718 5 Unmodified _LEERGEQW_ ENSG00000160961|ENST00000292530|ZNF333;ENST00000597301.5_1_19:14804303-14827921:+|nuORF;nc|ENSG00000160961|Q96JL9-3|ZNF333 20.453626601364224 0.6087503291685402 2 {I|L}EVD[C(Carbamidomethyl (C))K]PW 8 5 + 68.409 0.0 0.0 6.5433 6.5433 79.374 0.0 0.0 0.0 53.1926720723289 5.890625187447967 5.890625187447967 1.3033376849500655 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {I|L}EVD[C(Carbamidomethyl (C))K]PW;{I|L}EVDG[KC]PW;{I|L}EW[C(Carbamidomethyl (C))R]PW;{I|L}EVDA[C(Carbamidomethyl (C))K][DP];{I|L}E{[DA]|[EG]}[C(Carbamidomethyl (C))R]PW;{I|L}EWV[C(Carbamidomethyl (C))K][DP];{I|L}EVW[C(Carbamidomethyl (C))K][DP];{I|L}E{[DA]|[EG]}V[C(Carbamidomethyl (C))K][DP];{I|L}EW[YQ][PG][PG];{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}E]V[C(Carbamidomethyl (C))H]{I|L} 6.5433;6.4187;5.6423;4.9556;4.7498;4.4122;4.3359;3.5263;3.1953;2.9356 -;-;-;-;-;-;-;-;-;- 299 + 1 1.89 65165.6 1.0 3282 3417 6696 DOHH2_400M_050219_2,6701 DOHH2_400M_050219_2,6701,LEERGEQW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6702 36.099 233.0 457260.0 25 0 35711.0 + 13774 HSDQQVFEY 9 102 576.7512871874885 1151.488021441777 2 576.7517578005791 MULTI CID FTMS 0 0 0 6696 267862.25 0.2304005343224434 -1 0.0987358093261718 6 Unmodified _HSDQQVFEY_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 103.35351024395868 0.0092202910191236 2 [HS]DQQV{M(Oxidation (M))|F}EY 9 0 + 83.201 0.0 0.0 7.2255 7.2255 91.062 0.0 0.0 0.0 2.922152515121226 67.36424033557823 2.922152515121226 9.208187539523747 0 1.113982988912431 0.0 1.305462187404089 1.4604093769761874 + + [HS]DQQV{M(Oxidation (M))|F}EY;[HS]DQ[AG]V{M(Oxidation (M))|F}EY;[HS]D[AG]QV{M(Oxidation (M))|F}EY;[HS]DQQVE{M(Oxidation (M))|F}Y;[HS]D[AG]QVE{M(Oxidation (M))|F}Y;[HS]DQ[AG]VE{M(Oxidation (M))|F}Y;[HS]D[AG][AG]V{M(Oxidation (M))|F}EY;[HS]D[AG][AG]VE{M(Oxidation (M))|F}Y;[TP]E{M(Oxidation (M))|F}[YG]{M(Oxidation (M))|F}EY;[TP]E{M(Oxidation (M))|F}V[HM]EY 7.2255;6.4258;6.4258;5.9263;5.1266;5.1266;4.3617;3.3659;2.8347;2.3317 +;-;-;-;-;-;-;-;-;- + 441 1 1.89 85884.4 1.0 3283 3417 6696 DOHH2_400M_050219_2,6702 DOHH2_400M_050219_2,6702,HSDQQVFEY True True HSDQQVFEY 36.099138 576.751757800579 15435456.0 6696.0 nc|ENSG00000141076|Q969X6-3|UTP4;;ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 8.01063315073649 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6703 36.106 387.0 223450.0 25 0 29007.0 + 5280 DLAARNVL 8 119 436.2534878425848 870.4924227519697 2 436.2539550662041 MULTI CID FTMS 0 0 0 6696 140331.875 1.0 0 0.0 7 Unmodified _DLAARNVL_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000066056|ENST00000372476|TIE1;ENSG00000066468|ENST00000358487|FGFR2;ENSG00000068078|ENST00000440486|FGFR3;ENSG00000070886|ENST00000166244|EPHA8;ENSG00000077782|ENST00000447712|FGFR1;ENSG00000103653|ENST00000220003|CSK;ENSG00000105397|ENST00000525621|TYK2;ENSG00000111816|ENST00000606080|FRK;ENSG00000113721|ENST00000261799|PDGFRB;ENSG00000115085|ENST00000264972|ZAP70;ENSG00000122025|ENST00000241453|FLT3;ENSG00000125508|ENST00000217188|SRMS;ENSG00000134853|ENST00000257290|PDGFRA;ENSG00000141736|ENST00000269571|ERBB2;ENSG00000146648|ENST00000275493|EGFR;ENSG00000160867|ENST00000292408|FGFR4;ENSG00000162434|ENST00000342505|JAK1;ENSG00000165025|ENST00000375754|SYK;ENSG00000178568|ENST00000342788|ERBB4;ENST00000380987.2_1_13:28578191-28599431:-|nuORF;ENST00000473014.1_1_1:43783488-43785201:+|nuORF;ENST00000487283.5_1_2:98351482-98355958:+|nuORF;ENST00000495754.1_1_2:98351695-98354405:+|nuORF;ENST00000520579.5_1_5:149495328-149514444:-|nuORF;ENST00000526570.5_1_8:38271148-38285795:-|nuORF;ENST00000529422.1_1_19:10461953-10463789:-|nuORF;ENST00000530220.1_1_19:10461631-10463789:-|nuORF;ENST00000563010.1_1_15:75093985-75094348:+|nuORF;ENST00000564216.5_1_15:75092818-75094348:+|nuORF;ENST00000583038.5_1_17:37872360-37881463:+|nuORF;ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000068078|P22607-2|FGFR3;nc|ENSG00000068078|P22607-3|FGFR3;nc|ENSG00000068078|P22607-4|FGFR3;nc|ENSG00000077782|P11362-14|FGFR1;nc|ENSG00000077782|P11362-19|FGFR1;nc|ENSG00000077782|P11362-2|FGFR1;nc|ENSG00000077782|P11362-20|FGFR1;nc|ENSG00000077782|P11362-21|FGFR1;nc|ENSG00000077782|P11362-3|FGFR1;nc|ENSG00000077782|P11362-4|FGFR1;nc|ENSG00000077782|P11362-5|FGFR1;nc|ENSG00000077782|P11362-6|FGFR1;nc|ENSG00000077782|P11362-7|FGFR1;nc|ENSG00000111816|P42685-2|FRK;nc|ENSG00000115085|P43403-2|ZAP70;nc|ENSG00000115085|P43403-3|ZAP70;nc|ENSG00000141736|P04626-2|ERBB2;nc|ENSG00000141736|P04626-3|ERBB2;nc|ENSG00000141736|P04626-4|ERBB2;nc|ENSG00000141736|P04626-5|ERBB2;nc|ENSG00000160867|P22455-2|FGFR4;nc|ENSG00000165025|P43405-2|SYK;nc|ENSG00000178568|Q15303-2|ERBB4;nc|ENSG00000178568|Q15303-3|ERBB4;nc|ENSG00000178568|Q15303-4|ERBB4 26.88365393820708 0.4786498634179528 2 {NN|[MP]|[D{I|L}]|[EV]}AA 4 4 41.312 0.0 0.0 4.7459 0.0 0.0 0.0 497.2876375787719 497.2876375787719 24.524101265233483 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}AA 4.7459 + + 126 + 1 1.89 70444.8 1.0 3284 3417 6696 DOHH2_400M_050219_2,6703 DOHH2_400M_050219_2,6703,DLAARNVL False True DLAARNVL 36.106074 436.253955066204 596358.6875 6696.0 nc|ENSG00000077782|P11362-20|FGFR1;;nc|ENSG00000066468|P21802-17|FGFR2;;ENSG00000125508|ENST00000217188|SRMS;;ENSG00000113721|ENST00000261799|PDGFRB;;ENSG00000115085|ENST00000264972|ZAP70;;ENSG00000160867|ENST00000292408|FGFR4;;nc|ENSG00000141736|P04626-2|ERBB2;;nc|ENSG00000115085|P43403-2|ZAP70;;nc|ENSG00000068078|P22607-3|FGFR3;;nc|ENSG00000077782|P11362-3|FGFR1;;ENST00000380987.2_1_13:28578191-28599431:-|nuORF;;nc|ENSG00000077782|P11362-19|FGFR1;;ENSG00000066056|ENST00000372476|TIE1;;nc|ENSG00000165025|P43405-2|SYK;;ENSG00000178568|ENST00000342788|ERBB4;;ENST00000564216.5_1_15:75092818-75094348:+|nuORF;;nc|ENSG00000160867|P22455-2|FGFR4;;ENSG00000146648|ENST00000275493|EGFR;;nc|ENSG00000178568|Q15303-4|ERBB4;;ENST00000604236.5_1_10:123239373-123278228:-|nuORF;;ENST00000583038.5_1_17:37872360-37881463:+|nuORF;;nc|ENSG00000066468|P21802-23|FGFR2;;nc|ENSG00000068078|P22607-4|FGFR3;;nc|ENSG00000077782|P11362-2|FGFR1;;chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;;ENSG00000122025|ENST00000241453|FLT3;;ENSG00000077782|ENST00000447712|FGFR1;;nc|ENSG00000141736|P04626-4|ERBB2;;ENSG00000103653|ENST00000220003|CSK;;nc|ENSG00000077782|P11362-7|FGFR1;;ENST00000529422.1_1_19:10461953-10463789:-|nuORF;;nc|ENSG00000077782|P11362-14|FGFR1;;nc|ENSG00000066468|P21802-6|FGFR2;;ENSG00000066468|ENST00000358487|FGFR2;;ENSG00000070886|ENST00000166244|EPHA8;;nc|ENSG00000178568|Q15303-3|ERBB4;;ENST00000563010.1_1_15:75093985-75094348:+|nuORF;;nc|ENSG00000077782|P11362-21|FGFR1;;nc|ENSG00000077782|P11362-4|FGFR1;;ENST00000526570.5_1_8:38271148-38285795:-|nuORF;;ENST00000520579.5_1_5:149495328-149514444:-|nuORF;;ENST00000495754.1_1_2:98351695-98354405:+|nuORF;;nc|ENSG00000066468|P21802-8|FGFR2;;nc|ENSG00000066468|P21802-22|FGFR2;;nc|ENSG00000066468|P21802-3|FGFR2;;nc|ENSG00000077782|P11362-6|FGFR1;;nc|ENSG00000115085|P43403-3|ZAP70;;nc|ENSG00000068078|P22607-2|FGFR3;;ENSG00000165025|ENST00000375754|SYK;;nc|ENSG00000077782|P11362-5|FGFR1;;nc|ENSG00000066468|P21802-2|FGFR2;;ENSG00000162434|ENST00000342505|JAK1;;nc|ENSG00000066468|P21802-4|FGFR2;;ENSG00000111816|ENST00000606080|FRK;;nc|ENSG00000141736|P04626-5|ERBB2;;nc|ENSG00000066468|P21802-16|FGFR2;;ENST00000487283.5_1_2:98351482-98355958:+|nuORF;;nc|ENSG00000066468|P21802-5|FGFR2;;nc|ENSG00000066468|P21802-18|FGFR2;;ENSG00000068078|ENST00000440486|FGFR3;;nc|ENSG00000066468|P21802-20|FGFR2;;ENST00000473014.1_1_1:43783488-43785201:+|nuORF;;nc|ENSG00000066468|P21802-15|FGFR2;;nc|ENSG00000111816|P42685-2|FRK;;ENSG00000141736|ENST00000269571|ERBB2;;ENSG00000105397|ENST00000525621|TYK2;;nc|ENSG00000178568|Q15303-2|ERBB4;;ENST00000530220.1_1_19:10461631-10463789:-|nuORF;;ENSG00000134853|ENST00000257290|PDGFRA;;nc|ENSG00000066468|P21802-21|FGFR2;;nc|ENSG00000141736|P04626-3|ERBB2 -0.2316044966379801 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6704 36.12 800.0 195650.0 25 0 28242.0 -1 0 105 674.6919255737688 2021.0539473215065 3 674.6915771365166 MULTI CID FTMS 0 0 0 6696 120546.765625 1.0 0 0.0 8 2 KPTGARY 7 -1 43.598 0.0 0.0 2.1572 0.0 0.0 1024.480364828392 220.12874780826408 1244.609112636656 0.0 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 KPTGARY 2.1572 - 656 + 1 1.89 122496.2 0.6499999761581421 3285 3417 6696 DOHH2_400M_050219_2,6704 DOHH2_400M_050219_2,6704, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6705 36.13 603.0 228800.0 25 0 9395.2 + 31651 RRGDFIHVM 9 185 377.53402590558005 1129.5802483169402 3 377.5338317751884 MULTI CID FTMS 0 0 0 6696 116070.5 0.0619770111505544 7 -0.5188827514648438 9 Unmodified _RRGDFIHVM_ ENSG00000177885|ENST00000316804|GRB2;ENST00000462266.1_1_17:73316451-73322393:-|nuORF;nc|ENSG00000177885|P62993-2|GRB2 6.1918466704503565 0.6985299363762377 2 Q[HK]CHVM 7 6 22.917 0.0 0.0 2.0288 0.0 0.0 248.17715651679845 0.0 248.17715651679845 0.0 3.598393457511872 0.0 0.0 0 0.4386218330464625 0.0 0.0 0.7059771852360797 Q[HK]CHVM 2.0288 - 85 1 1.89 109289.9 1.0 3286 3417 6696 DOHH2_400M_050219_2,6705 DOHH2_400M_050219_2,6705,RRGDFIHVM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6706 36.144 800.0 84889.0 25 0 6234.7 + 13481 HLVDEPQNLIK 11 109 653.361704334249 1304.708855735298 2 653.3625976443291 MULTI CID FTMS 0 0 0 6696 93948.78125 0.0532866959983625 6 -0.4746742248535156 10 Unmodified _HLVDEPQNLIK_ CON__P02769 46.4752305370441 0.1371501875038488 2 H{I|L}VDE 5 6 64.553 0.0 0.0 4.9477 0.0 0.0 0.0 708.4044459763093 708.4044459763093 39.03237333439522 0.0 0.0 0.0 0 1.2614393726401687 1.6989700043360187 0.0 0.0 + H{I|L}VDE 4.9477 + + 159 + 1 1.89 52474.4 0.5899999737739563 3287 3417 6696 DOHH2_400M_050219_2,6706 DOHH2_400M_050219_2,6706,HLVDEPQNLIK False True False False contaminant PXD020620_cell_line DOHH2_400M_050219_2 6707 36.155 502.0 269000.0 25 0 19655.0 + 19027 LDLILEALV 9 142 499.8124465740676 997.6103402149351 2 499.8125793337822 MULTI CID FTMS 0 0 0 6696 82449.6640625 1.0 0 0.0 11 Unmodified _LDLILEALV_ REV__chr12:110661448-110688625|40|10.35|0.61|4.09|-|ENST00000439744|HVCN1,HVCN1;REV__ENSG00000122986|ENST00000242607|HVCN1;REV__nc|ENSG00000122986|Q96D96-2|HVCN1;REV__nc|ENSG00000122986|Q96D96-3|HVCN1;REV__nc|ENSG00000122986|Q96D96-4|HVCN1 21.74664581756881 0.2544899275067181 2 N{I|L}{I|L}{I|L}EKGV{I|L} 9 -1 + 49.091 0.0 0.0 4.9209 4.9209 73.328 0.0 0.0 0.0 6.430958962039135 9.952055268602322 6.430958962039135 1.2371250542002343 0 0.7742275032520141 0.0 0.3807196863200844 0.6989700043360187 N{I|L}{I|L}{I|L}EKGV{I|L};N{I|L}{I|L}{I|L}EKVG{I|L};{I|L}SVV[PS]KGV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{I|L}SVV[PS]KVG{I|L};{[QN]|[E{I|L}]|[KN]}K[KT][PA]V{I|L};{[QN]|[E{I|L}]|[KN]}K[KT]VAP{I|L};{[QN]|[E{I|L}]|[KN]}KV{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{I|L}WVK{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L};{I|L}SVVK[PS]GV{I|L} 4.9209;4.7969;3.1062;3.067;2.9822;2.7113;2.5534;2.3841;2.2483;2.1524 -;-;-;-;-;-;-;-;-;- 2342 + 1 1.89 107393.1 1.0 3288 3417 6696 DOHH2_400M_050219_2,6707 DOHH2_400M_050219_2,6707,LDLILEALV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6708 36.162 432.0 209730.0 25 0 15698.0 + 5740 DPMKARVVL 9 97 514.7993252422002 1027.5840975512003 2 514.8001586794853 MULTI CID FTMS 0 0 0 6696 333114.21875 0.0490655183404926 4 -0.4016838073730469 12 Unmodified _DPMKARVVL_ ENSG00000143742|ENST00000304786|SRP9;nc|ENSG00000143742|P49458-2|SRP9 49.93300154707207 0.0405168250806675 2 DPMKA[RV]V{I|L} 9 0 + 53.254 0.0 0.0 5.1825 5.1825 89.394 0.0 0.0 0.0 27.05655227340745 0.5328302692860021 0.5328302692860021 41.70442746986683 0 1.1307196863200843 1.5228787452803376 0.0 0.0 + + DPMKA[RV]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[RE]|[WV]}K[RV]{I|L};[{M(Oxidation (M))|F}V][QP]A[RV]V{I|L};[{M(Oxidation (M))|F}V]P[PG]RRS{I|L} 5.1825;1.124;0.63011;0.068889 +;-;-;- + 79 + 1 1.89 77484.1 1.0 3289 3417 6696 DOHH2_400M_050219_2,6708 DOHH2_400M_050219_2,6708,DPMKARVVL True True DPMKARVVL 36.162286 514.800158679485 119986044.0 6696.0 ENSG00000143742|ENST00000304786|SRP9;;nc|ENSG00000143742|P49458-2|SRP9 7.5353922843933105 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6710 36.167 22.0 2000400.0 25 0 286340.0 + 26389 NTDHQTQLLY 10 62 616.7983856575039 1231.5822183818077 2 616.7985107302666 MULTI CID FTMS 0 0 0 6709 2113579.5 0.4691048324969221 2 -0.2478523254394531 1 Unmodified _NTDHQTQLLY_ ENSG00000051180|ENST00000267868|RAD51;nc|ENSG00000051180|Q06609-2|RAD51;nc|ENSG00000051180|Q06609-3|RAD51;nc|ENSG00000051180|Q06609-4|RAD51 47.594388314883695 0.0942698883389255 2 QTQ{I|L}{I|L}Y 6 4 69.095 0.0 0.0 5.6103 0.0 0.0 467.1778736798844 0.0 467.1778736798844 0.0 57.41262553045186 0.0 0.0 0 1.0 0.0 1.110924374808178 0.805462187404089 + QTQ{I|L}{I|L}Y 5.6103 + + 44 1 1.89 40703.4 1.0 3290 3418 6709 DOHH2_400M_050219_2,6710 DOHH2_400M_050219_2,6710,NTDHQTQLLY True True NTDHQTQLLY 36.166815 616.798510730267 65066636.0 6709.0 nc|ENSG00000051180|Q06609-3|RAD51;;nc|ENSG00000051180|Q06609-4|RAD51;;nc|ENSG00000051180|Q06609-2|RAD51;;ENSG00000051180|ENST00000267868|RAD51 7.30655574798584 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6711 36.17 189.0 380910.0 25 0 25316.0 + -1 VKPCKVFIY 9 96 385.2207546735995 1152.6404346209986 3 385.2205688357353 MULTI CID FTMS 0 0 0 6709 180480.0625 0.1638805224416264 2 -0.2478523254394531 2 Carbamidomethyl (C) _VKPC(Carbamidomethyl (C))KVFIY_ REV__ENSG00000165168|ENST00000378588|CYBB 4.897010918128616 0.7437319958283661 2 {I|L}Y 2 -1 22.206 0.0 0.0 1.9266 0.0 0.0 858.4842428058596 0.0 858.4842428058596 0.0 11.237125054200234 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}Y 1.9266 + + 13 1 1.89 58869.0 1.0 3291 3418 6709 DOHH2_400M_050219_2,6711 DOHH2_400M_050219_2,6711,VKPCKVFIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6712 36.172 93.0 694280.0 25 0 114340.0 + 5115 DIDTRSEFY 9 77 573.2591316796832 0 573.2593261599541 PEAK CID FTMS 0 0 0 6709 554094.875 0.6495101960915325 -1 0.0923271179199218 3 Unmodified _DIDTRSEFY_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 40.23920728925047 0.0605413866147893 2 DT 2 7 18.315 0.0 0.0 1.6003 0.0 0.0 228.1101448921508 697.3006075494749 925.4107524416256 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 + DT 1.6003 + + 81 + 1 1.89 51907.7 1.0 3292 3418 6709 DOHH2_400M_050219_2,6712 DOHH2_400M_050219_2,6712,DIDTRSEFY True True DIDTRSEFY 36.172485 573.259326159954 10739339.0 6709.0 ENSG00000138071|ENST00000260641|ACTR2;;nc|ENSG00000138071|P61160-2|ACTR2 7.013706207275391 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6713 36.176 176.0 527080.0 25 0 109670.0 + 26083 NPDLELAR 8 91 464.249984998628 926.485417064056 2 464.2514221072197 MULTI CID FTMS 0 0 0 6709 340147.6875 0.2050834312081042 -1 0.0923271179199218 4 Unmodified _NPDLELAR_ REV__ENSG00000133026|ENST00000360416|MYH10;REV__nc|ENSG00000133026|P35580-2|MYH10;REV__nc|ENSG00000133026|P35580-3|MYH10;REV__nc|ENSG00000133026|P35580-5|MYH10;REV__nc|ENSG00000133026|P35580|MYH10 16.942295170755138 0.6606234159769251 2 Y{I|L}YE{I|L}AR 7 -1 + 82.779 0.0 0.0 8.9347 8.9347 96.803 0.0 0.0 0.0 36.32023214705406 18.99333996230069 18.99333996230069 18.99333996230069 0 0.4247425010840047 2.0 0.0 0.805462187404089 Y{I|L}YE{I|L}AR;Y{I|L}YE{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 8.9347;6.8847 -;- 91 + 1 1.89 75021.2 1.0 3293 3418 6709 DOHH2_400M_050219_2,6713 DOHH2_400M_050219_2,6713,NPDLELAR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6714 36.179 128.0 490520.0 25 0 56905.0 + 31772 RSFFHQHYL 9 79 412.20914884535233 1233.605617136257 3 412.2089111208916 MULTI CID FTMS 0 0 0 6709 262261.40625 1.0 0 0.0 5 Unmodified _RSFFHQHYL_ ENSG00000204463|ENST00000676615|BAG6;ENST00000462875.1_1_6:31609234-31609708:-|nuORF;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 10.799506525563784 0.5443532743200366 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HQH{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y 9 5 + 27.735 0.0 0.0 2.2482 2.2482 64.342 0.0 0.0 0.0 5.311766136384474 0.3218468337140123 0.3218468337140123 0.3218468337140123 0 0.0 0.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HQH{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HQH{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HQH{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}H[AG]H{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}H[AG]H{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}H[AG]H{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L} 2.2482;2.2222;2.1394;1.5018;1.4757;1.393 -;-;-;-;-;- 118 + 1 1.89 54381.0 1.0 3294 3418 6709 DOHH2_400M_050219_2,6714 DOHH2_400M_050219_2,6714,RSFFHQHYL False True RSFFHQHYL 36.178514 412.208911120892 1558830.5 6709.0 nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000204463|P46379-5|BAG6;;nc|ENSG00000204463|P46379-4|BAG6;;nc|ENSG00000204463|P46379-2|BAG6;;ENST00000462875.1_1_6:31609234-31609708:-|nuORF;;ENSG00000204463|ENST00000676615|BAG6 5.171971638997396 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6715 36.185 383.0 267580.0 25 0 11594.0 + 43339 WMHKVPASL 9 129 534.7867610408811 0 534.7868530154228 PEAK CID FTMS 0 0 0 6709 242632.390625 1.0 0 0.0 6 Unmodified _WMHKVPASL_ ENSG00000105369|ENST00000221972|CD79A;nc|ENSG00000105369|P11912-2|CD79A 99.79894945604345 0.0288293043136998 2 MHKV[PA]S 7 2 34.214 0.0 0.0 3.2049 0.0 0.0 186.0791240331308 128.07222925357658 314.1513532867074 0.0 0.0 0.0 0.0 0 1.91944517631652 0.0 0.6549471895720984 0.0 + MHKV[PA]S 3.2049 + + 235 + 1 1.89 83039.9 1.0 3295 3418 6709 DOHH2_400M_050219_2,6715 DOHH2_400M_050219_2,6715,WMHKVPASL True True WMHKVPASL 36.185396 534.786853015423 1055689.75 6709.0 nc|ENSG00000105369|P11912-2|CD79A;;ENSG00000105369|ENST00000221972|CD79A 8.526606559753418 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6716 36.199 800.0 148180.0 25 0 10884.0 -1 0 109 881.9126736032672 1761.8107942733343 2 881.9190551638603 MULTI CID FTMS 0 0 0 6709 220161.765625 0.1851818027071771 6 -0.4265556335449219 7 2 [NP]{I|L}NET[HK]EN{I|L}NP 13 -1 70.483 0.0 0.0 4.0006 0.0 0.0 0.0 258.04490601786887 258.04490601786887 42.40567152401708 0.0 0.0 0.0 0 0.9247425010840048 0.8860566476931632 1.3684151806525389 0.4247425010840047 [NP]{I|L}NET[HK]EN{I|L}NP 4.0006 - 3263 1 1.89 84452.7 0.800000011920929 3296 3418 6709 DOHH2_400M_050219_2,6716 DOHH2_400M_050219_2,6716, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6717 36.204 244.0 308850.0 25 0 26724.0 + 6248 DTNADKQLSF 10 105 569.7730565099433 1137.5315600866866 2 569.7721435427666 MULTI CID FTMS 0 0 0 6709 206813.71875 1.0 0 0.0 8 Unmodified _DTNADKQLSF_ ENSG00000163220|ENST00000368738|S100A9 49.74193281347159 0.0816655385645911 2 {[ES]|[DT]|[{I|L}C]}NAD[KQ]{I|L}S{M(Oxidation (M))|F} 10 0 + 52.203 0.0 0.0 4.5891 4.5891 78.588 0.0 0.0 0.0 5.764837301042718 11.84447197927419 5.764837301042718 6.7609125905568135 0 2.1307196863200843 0.0 0.2302046884880938 0.0 + + {[ES]|[DT]|[{I|L}C]}NAD[KQ]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NW[KQ]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGAD[KQ]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NAD[KQ]{I|L}AY;{[ES]|[DT]|[{I|L}C]}NA{[QG]|[NA]}[VS]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGW[KQ]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NW[KQ]{I|L}AY;{[ES]|[DT]|[{I|L}C]}NQQ[VS]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGAD[KQ]{I|L}AY;{[QS]|[NT]}DAD[KQ]{I|L}S{M(Oxidation (M))|F} 4.5891;3.9948;3.7835;3.5479;3.474;3.1853;2.9535;2.8758;2.7422;2.6844 +;-;-;-;-;-;-;-;-;- + 625 + 1 1.89 61207.8 1.0 3297 3418 6709 DOHH2_400M_050219_2,6717 DOHH2_400M_050219_2,6717,DTNADKQLSF True True DTNADKQLSF 36.20381 569.772143542767 1411655.75 6709.0 ENSG00000163220|ENST00000368738|S100A9 7.652059713999431 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6718 36.208 210.0 288560.0 25 0 15320.0 + 42169 VSDFRKEFY 9 101 397.5329135510247 1189.576911253274 3 397.5329772830009 MULTI CID FTMS 0 0 0 6709 191908.875 1.0 0 0.0 9 Unmodified _VSDFRKEFY_ ENSG00000093009|ENST00000263201|CDC45;ENST00000491520.5_1_22:19467485-19467677:+|nuORF;nc|ENSG00000093009|O75419-2|CDC45;nc|ENSG00000093009|O75419-3|CDC45 9.5439744041441 0.5815088571869578 2 VY[YG]{M(Oxidation (M))|F}Y 6 6 21.26 0.0 0.0 1.7872 0.0 0.0 0.0 394.2096956842407 394.2096956842407 5.061668675368622 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VY[YG]{M(Oxidation (M))|F}Y 1.7872 - 55 + 1 1.89 53090.7 1.0 3298 3418 6709 DOHH2_400M_050219_2,6718 DOHH2_400M_050219_2,6718,VSDFRKEFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6719 36.212 250.0 409320.0 25 0 35129.0 + 29486 QLKFARSL 8 94 481.7926911342678 961.5708293353356 2 481.7927123904228 MULTI CID FTMS 0 0 0 6709 171211.46875 0.5491566193326787 -1 0.0923271179199218 10 Unmodified _QLKFARSL_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF;nc|ENSG00000174748|P61313-2|RPL15 29.081581746732265 0.4323690340403521 2 [Q{I|L}]K{M(Oxidation (M))|F}ARS{I|L} 8 0 + 51.041 0.0 0.0 5.3081 5.3081 80.064 0.0 0.0 0.0 22.21848749616356 5.759602195172775 5.759602195172775 5.759602195172775 0 0.2887254899964357 1.5228787452803376 0.1747425010840047 0.4247425010840047 + + [Q{I|L}]K{M(Oxidation (M))|F}ARS{I|L};[Q{I|L}]K{M(Oxidation (M))|F}{I|L}KW;[Q{I|L}]K{M(Oxidation (M))|F}[WK]{I|L};[Q{I|L}]K{I|L}{M(Oxidation (M))|F}KW;[Q{I|L}]{I|L}K{M(Oxidation (M))|F}KW;[Q{I|L}]K{I|L}[WK]{M(Oxidation (M))|F};[Q{I|L}]{I|L}K[WK]{M(Oxidation (M))|F} 5.3081;4.7091;3.9452;3.9392;3.6261;3.1752;2.8622 +;-;-;-;-;-;- + 124 + 1 1.89 83221.2 1.0 3299 3418 6709 DOHH2_400M_050219_2,6719 DOHH2_400M_050219_2,6719,QLKFARSL False True QLKFARSL 36.212435 481.792712390423 1738551.5 6709.0 ENST00000490223.1_1_3:23959920-23960989:+|nuORF;;ENSG00000174748|ENST00000307839|RPL15;;nc|ENSG00000174748|P61313-2|RPL15;;ENST00000436146.1_1_3:23959450-23960989:+|nuORF 5.436068216959636 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6720 36.218 296.0 213610.0 25 0 14249.0 26869 PDAHLSAEDF 10 104 551.2466910750657 1100.4788292169312 2 551.2467529177666 MULTI CID FTMS 0 0 0 6709 171804.734375 1.0 0 0.0 11 Unmodified _PDAHLSAEDF_ ENSG00000163870|ENST00000355552|TPRA1;nc|ENSG00000163870|Q86W33-2|TPRA1;nc|ENSG00000163870|Q86W33-3|TPRA1 20.453626601364224 0.5043500229302764 2 AK{M(Oxidation (M))|F} 3 8 20.177 0.0 0.0 1.8335 0.0 0.0 736.267294648375 0.0 736.267294648375 0.0 5.411071373652447 0.0 0.0 0 0.0 0.0 0.0 0.0 AK{M(Oxidation (M))|F} 1.8335 - 350 + 1 1.89 54320.2 1.0 3300 3418 6709 DOHH2_400M_050219_2,6720 DOHH2_400M_050219_2,6720,PDAHLSAEDF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6721 36.233 800.0 142340.0 25 0 9631.1 -1 0 105 909.4146369616468 1816.8147209900933 2 909.4174072146416 MULTI CID FTMS 0 0 0 6709 126609.3359375 1.0 0 0.0 12 2 [NP]{I|L}N[PG][NP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 17 -1 + 73.315 0.0 0.0 4.0353 4.0353 69.449 0.0 0.0 0.0 12.176807695945456 21.5039329172521 12.176807695945456 0.8780139663765993 0 1.7302046884880935 0.9208187539523752 0.0 1.1307196863200843 [NP]{I|L}N[PG][NP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[PS][YN]AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HN]E{I|L}DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}[HM][NP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NADQR[YC(Carbamidomethyl (C))]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NWQR[YC(Carbamidomethyl (C))]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}[WH]{[{M(Oxidation (M))|F}H]|[RQ]}DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}[HM][NP]QWN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NADQR[YC(Carbamidomethyl (C))]{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[AG]R[YC(Carbamidomethyl (C))]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.0353;3.987;3.926;3.6651;3.5376;3.432;3.4057;3.2958;3.0405;3.0405 -;-;-;-;-;-;-;-;-;- 1798 1 1.89 80716.7 0.6200000047683716 3301 3418 6709 DOHH2_400M_050219_2,6721 DOHH2_400M_050219_2,6721, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6722 36.247 800.0 85487.0 25 0 4129.6 + -1 DEEYSANLCMS 11 127 639.2380181180677 1276.4614833029352 2 639.2379028201103 MULTI CID FTMS 0 0 0 6709 97524.90625 1.0 0 0.0 13 Oxidation (M) _DEEYSANLCM(Oxidation (M))S_ REV__ENST00000327761.7_1_3:50367424-50367508:-|nuORF 5.296884461304476 0.8501568894076437 2 Y 1 -1 13.495 0.0 0.0 1.0572 0.0 0.0 1095.3871252480508 0.0 1095.3871252480508 0.0 -1.4536501951208436 -1.4536501951208436 0.0 0 0.0 0.0 0.0 0.0 Y 1.0572 + + 111 + 1 1.89 57320.2 0.6100000143051147 3302 3418 6709 DOHH2_400M_050219_2,6722 DOHH2_400M_050219_2,6722,DEEYSANLCMS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6723 36.252 286.0 237460.0 25 0 14912.0 5350 DLHVPNEDRI 10 98 403.20561681557297 1206.5950210469189 3 403.2065002322197 MULTI CID FTMS 0 0 0 6709 76368.0078125 1.0 0 0.0 14 Unmodified _DLHVPNEDRI_ ENSG00000118369|ENST00000529308|USP35;ENST00000530546.5_1_11:77911190-77917082:+|nuORF;nc|ENSG00000118369|Q9P2H5-2|USP35 6.1918466704503565 0.6979955778746556 2 PK{I|L} 3 8 11.682 0.0 0.0 0.96822 0.0 0.0 359.15309585012955 506.1865938776001 865.3396897277296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PK{I|L} 0.96822 - 23 + 1 1.89 57409.9 1.0 3303 3418 6709 DOHH2_400M_050219_2,6723 DOHH2_400M_050219_2,6723,DLHVPNEDRI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6724 36.267 800.0 175670.0 25 0 41521.0 + 3236 AYAQEVETREK 11 128 662.3328430983255 0 662.3320800662041 PEAK CID FTMS 0 0 0 6709 82106.3359375 1.0 0 0.0 15 Unmodified _AYAQEVETREK_ REV__ENSG00000125733|ENST00000313244|TRIP10;REV__ENST00000595305.5_1_19:6739772-6750443:+|nuORF;REV__ENST00000595319.5_1_19:6741032-6741137:+|nuORF;REV__ENST00000596078.5_1_19:6741032-6743282:+|nuORF;REV__nc|ENSG00000125733|Q15642-2|TRIP10;REV__nc|ENSG00000125733|Q15642-3|TRIP10;REV__nc|ENSG00000125733|Q15642-4|TRIP10;REV__nc|ENSG00000125733|Q15642-5|TRIP10 8.155526934196011 0.4672964927559179 2 RD{I|L}WCA 6 -1 27.568 0.0 0.0 2.0843 0.0 0.0 199.10953445535216 376.1975496881469 575.3070841434991 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3494850021680094 RD{I|L}WCA 2.0843 - 359 + 1 1.89 103515.3 0.5799999833106995 3304 3418 6709 DOHH2_400M_050219_2,6724 DOHH2_400M_050219_2,6724,AYAQEVETREK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6725 36.268 41.0 1095800.0 25 0 87098.0 + 15790 LSEPSSLQY 9 80 511.7666409227638 0 511.7666503787041 PEAK CID FTMS 0 0 0 6709 268815.625 1.0 0 0.0 16 Unmodified _ISELRNQY_ nc|ENSG00000113161|P04035-3|HMGCR;ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR 34.18733598223924 0.1926487934498573 2 Q{I|L}ST 4 7 10.152 0.0 0.0 0.99377 0.0 0.0 509.2578169023652 80.01490961246327 589.2727265148285 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 Q{I|L}ST 0.99377 - 109 + 1 1.89 38904.0 1.0 3305 3418 6709 DOHH2_400M_050219_2,6725 DOHH2_400M_050219_2,6725,ISELRNQY False False LSEPSSLQY 36.268185 511.766650378704 10233152.0 6709.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 4.615201632181804 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6726 36.276 435.0 160150.0 25 0 19697.0 + -1 LCRPGCLWY 9 109 584.2747062599079 1166.5348595866158 2 584.2747070193291 MULTI CID FTMS 0 0 0 6709 201382.59375 1.0 0 0.0 17 Carbamidomethyl (C) _LC(Carbamidomethyl (C))RPGCLWY_ REV__ENST00000064778.8_1_11:73113059-73113341:-|nuORF 11.640296217721598 0.521594087909532 2 [AG]PS[RP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WY 10 -1 [AG]PS[RP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}W + + 21.99 -6.9335 -0.70358 1.885 1.885 47.359 0.0 0.0 0.0 0.0 0.5630250076728771 0.0 0.0 0 0.5 0.0 0.0 0.0 [AG]PS[RP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WY 1.885 - 308 + 1 1.89 56406.0 1.0 3306 3418 6709 DOHH2_400M_050219_2,6726 DOHH2_400M_050219_2,6726,LCRPGCLWY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6727 36.29 800.0 310910.0 25 0 33561.0 + -1 QGNVRDIIME 10 172 595.795765871341 1189.576978809482 2 595.7959472537041 MULTI CID FTMS 0 0 0 6709 128856.84375 1.0 0 0.0 18 Oxidation (M) _QGNVRDIIM(Oxidation (M))E_ REV__ENSG00000111880|ENST00000369485|RNGTT;REV__nc|ENSG00000111880|O60942-2|RNGTT;REV__nc|ENSG00000111880|O60942-3|RNGTT;REV__nc|ENSG00000111880|O60942-4|RNGTT 34.40172386719151 0.2166836008404837 2 [PS]QKN{I|L}D{I|L}[{M(Oxidation (M))|F}E] 10 -1 + 69.156 0.0 0.0 5.8135 5.8135 79.891 0.0 0.0 0.0 5.05805663670256 6.761594111505509 5.05805663670256 3.520599913279625 0 0.0 0.6777807052660807 1.5264209843288905 1.316901560044258 [PS]QKN{I|L}D{I|L}[{M(Oxidation (M))|F}E];[PS]QKND{I|L}{I|L}[{M(Oxidation (M))|F}E];[AG]SPKN{I|L}D{I|L}[{M(Oxidation (M))|F}E];{[QS]|[NT]}PKN{I|L}D{I|L}[{M(Oxidation (M))|F}E];[PS]QKN{I|L}DY[EP];[PS]QKGG{I|L}D{I|L}[{M(Oxidation (M))|F}E];[PS][AG]KN{I|L}D{I|L}[{M(Oxidation (M))|F}E];[AG]KSPN{I|L}D{I|L}[{M(Oxidation (M))|F}E];[KQ]SPN{I|L}D{I|L}[{M(Oxidation (M))|F}E];[AG]SPKND{I|L}{I|L}[{M(Oxidation (M))|F}E] 5.8135;5.5175;5.1076;5.0787;5.0623;5.0431;5.0431;4.863;4.8341;4.8116 -;-;-;-;-;-;-;-;-;- 13048 1 1.89 184028.2 0.6800000071525574 3307 3418 6709 DOHH2_400M_050219_2,6727 DOHH2_400M_050219_2,6727,QGNVRDIIME False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6728 36.299 481.0 115640.0 25 0 12074.0 + 6721 EDIPQHYNMC 10 89 625.2522056162638 1248.4898582993276 2 625.2525512576103 MULTI CID FTMS 0 0 0 6709 125489.859375 1.0 0 0.0 19 Unmodified _EDIPQHYNMC_ REV__ENSG00000173157|ENST00000389420|ADAMTS20;REV__nc|ENSG00000173157|P59510-2|ADAMTS20;REV__nc|ENSG00000173157|P59510|ADAMTS20 9.38312468134398 0.6832340498775793 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V 4 -1 25.445 0.0 0.0 2.0381 0.0 0.0 0.0 789.2435280235029 789.2435280235029 10.841218823962109 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V 2.0381 - 98 + 1 1.89 50919.1 1.0 3308 3418 6709 DOHH2_400M_050219_2,6728 DOHH2_400M_050219_2,6728,EDIPQHYNMC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6730 36.304 4.1 8353400.0 25 0 531900.0 + 2689 ATEDPWKTNY 10 63 612.7801090649566 1223.5456651967131 2 612.7814208865166 MULTI CID FTMS 0 0 0 6729 9629428.0 0.3227863202607276 1 -0.1105461120605468 1 Unmodified _ATEDPWKTNY_ ENSG00000139684|ENST00000378720|ESD 53.40400417844725 0.0601721406801337 2 [TA]EDPW[KT]NY 10 0 + 57.374 0.0 0.0 4.6891 4.6891 72.516 0.0 0.0 0.0 10.133639615579815 1.383026981662816 1.383026981662816 1.383026981662816 0 0.4247425010840047 1.3979400086720375 0.3807196863200844 0.4247425010840047 + + [TA]EDPW[KT]NY;[TA]EDP[PS]DK[HQ];[TA]EDPW[KT]GGY;[PG]E[Q{I|L}]WPDE[PG];[PG]EDRRPDE[PG];[PG]E[Q{I|L}]{[DA]|[EG]}PD[WP];[WK]PD[PS]PDE[PG];[TA]{[{M(Oxidation (M))|F}D]|MM}YNTK[HQ];[TA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YDTK[HQ];[TA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YTDK[HQ] 4.6891;4.5761;3.9401;3.8609;3.471;2.9644;2.8623;2.7872;2.6851;2.5412 +;-;-;-;-;-;-;-;-;- + 277 + 1 1.892 32131.5 1.0 3309 3419 6729 DOHH2_400M_050219_2,6730 DOHH2_400M_050219_2,6730,ATEDPWKTNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6731 36.306 86.0 632260.0 25 0 56963.0 + 15990 ITDPDPDIRY 10 75 602.7961003620584 1203.577647790917 2 602.7964355349541 MULTI CID FTMS 0 0 0 6729 352289.4375 0.2786185212133674 1 -0.1105461120605468 2 Unmodified _ITDPDPDIRY_ ENSG00000198793|ENST00000361445|MTOR 32.037481411007896 0.2488723560272515 2 {I|L}TDPD[DP]{I|L}RY 10 0 + 72.6 0.0 0.0 6.032 6.032 91.626 0.0 0.0 0.0 52.14246308919897 15.026975159433531 15.026975159433531 23.494850021680094 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + + {I|L}TDPD[DP]{I|L}RY;{I|L}DTPD[DP]{I|L}RY;{I|L}TDPD[DP][HV][VP];{I|L}T{[DS]|[MA]|[CV]|TT}AY[YR]{[ES]|[DT]|[{I|L}C]};{I|L}TDP[HS][YR]{[ES]|[DT]|[{I|L}C]};{I|L}T{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y[YR]{[ES]|[DT]|[{I|L}C]};{I|L}DTPD[DP][HV][VP];{I|L}DTP[HS][YR]{[ES]|[DT]|[{I|L}C]};{I|L}[R{M(Oxidation (M))|F}]AY[YR]{[ES]|[DT]|[{I|L}C]} 6.032;4.0799;3.9225;3.3304;3.1238;2.7877;2.6762;1.1717;1.0857 +;-;-;-;-;-;-;-;- + 208 + 1 1.892 43802.9 1.0 3310 3419 6729 DOHH2_400M_050219_2,6731 DOHH2_400M_050219_2,6731,ITDPDPDIRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6732 36.307 24.0 1468800.0 25 0 143790.0 + 22942 LSEPSSLQY 9 69 512.2521463773691 1022.489739821538 2 512.2532226443291 MULTI CID FTMS 0 0 0 6729 1900589.75 1.0 0 0.0 3 Unmodified _LSEPSSLQY_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 18.13498045792455 0.3457906370836843 2 {[TV]|[{I|L}S]}[PS]Q 5 4 17.72 0.0 0.0 1.7331 0.0 0.0 0.0 507.2070609487444 507.2070609487444 0.7306842758111998 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.805462187404089 0.0 {[TV]|[{I|L}S]}[PS]Q 1.7331 - 79 1 1.892 34548.6 1.0 3311 3419 6729 DOHH2_400M_050219_2,6732 DOHH2_400M_050219_2,6732,LSEPSSLQY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6733 36.308 24.0 3387000.0 25 0 359580.0 + 20530 LLLRRTQLL 9 67 375.91945738590834 1124.736542757925 3 375.9201537966728 MULTI CID FTMS 0 0 0 6729 1867561.25 1.0 0 0.0 4 Unmodified _LLLRRTQLL_ ENSG00000255181|ENST00000542437|CCDC166 13.614867670302877 0.4681447649821485 2 WV{I|L}{I|L} 4 7 24.412 0.0 0.0 2.1705 0.0 0.0 595.4142933576187 0.0 595.4142933576187 0.0 8.927900303521312 0.0 0.0 0 0.0 0.0 0.0 0.0 WV{I|L}{I|L} 2.1705 - 26 1 1.892 70343.0 1.0 3312 3419 6729 DOHH2_400M_050219_2,6733 DOHH2_400M_050219_2,6733,LLLRRTQLL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6734 36.31 42.0 1353400.0 25 0 122640.0 + 7720 ELDDTLKY 8 74 498.7477008893824 995.4808488455648 2 498.7479125857353 MULTI CID FTMS 0 0 0 6729 1362400.5 1.0 0 0.0 5 Unmodified _ELDDTLKY_ ENSG00000104695|ENST00000221138|PPP2CB;ENSG00000113575|ENST00000481195|PPP2CA;ENST00000472253.1_1_5:133533465-133534901:-|nuORF;nc|ENSG00000113575|P67775-2|PPP2CA 54.773552608820026 0.1167943196628344 2 {[QN]|[E{I|L}]|[KN]}DDT{I|L}KY 8 0 + 69.58 0.0 0.0 6.9896 6.9896 94.415 0.0 0.0 0.0 42.54075503321209 14.024174299985006 14.024174299985006 22.04873480831204 0 0.2887254899964357 1.6989700043360187 0.805462187404089 0.3054621874040891 + + {[QN]|[E{I|L}]|[KN]}DDT{I|L}KY;{[QN]|[E{I|L}]|[KN]}D[{I|L}V]S{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}VVES{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}QQ{[MG]|[TS]}KY;DDT{I|L}[YK]{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HT]{[MG]|[TS]}KY;{[DS]|[MA]|[CV]|TT}E{I|L}[YK]{[QN]|[E{I|L}]|[KN]};[{I|L}T]DD[YK]{[QN]|[E{I|L}]|[KN]} 6.9896;4.7747;4.7747;3.8754;1.8735;1.1496;0.89723;0.18928 +;-;-;-;-;-;-;- + 155 + 1 1.892 49009.3 1.0 3313 3419 6729 DOHH2_400M_050219_2,6734 DOHH2_400M_050219_2,6734,ELDDTLKY True True ELDDTLKY 36.309589 498.747912585735 6501030.5 6729.0 ENSG00000104695|ENST00000221138|PPP2CB;;ENST00000472253.1_1_5:133533465-133534901:-|nuORF;;nc|ENSG00000113575|P67775-2|PPP2CA;;ENSG00000113575|ENST00000481195|PPP2CA 6.999981085459392 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6735 36.312 85.0 541910.0 25 0 61922.0 + 32875 SEIEDSTKQVF 11 71 641.8115066322325 1281.608460331265 2 641.8120605349541 MULTI CID FTMS 0 0 0 6729 647274.9375 1.0 0 0.0 6 Unmodified _SEIEDSTKQVF_ ENSG00000139618|ENST00000380152|BRCA2 63.22749603027936 0.0560465731344335 2 {[QN]|[E{I|L}]|[KN]}SETEV{[ET]|[MV]}V{M(Oxidation (M))|F} 11 7 + 70.705 0.0 0.0 5.5169 5.5169 78.535 0.0 0.0 0.0 9.999999999999991 16.575773191777927 9.999999999999991 3.4948500216800937 0 1.6237125054200234 1.3010299956639813 1.1237125054200234 0.0 {[QN]|[E{I|L}]|[KN]}SETEV{[ET]|[MV]}V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}SETV{[QC]|[C(Carbamidomethyl (C))A]}QV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}SETE{I|L}{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}SETVE{[ET]|[MV]}V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}SETEV{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}ETEV{[ET]|[MV]}V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}S[{I|L}T]D{[QC]|[C(Carbamidomethyl (C))A]}QV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}SETE{I|L}V{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}S[{I|L}T]DE{[ET]|[MV]}V{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}ETV{[QC]|[C(Carbamidomethyl (C))A]}QV{M(Oxidation (M))|F} 5.5169;5.2442;5.1068;5.0094;4.9263;4.7367;4.7023;4.5162;4.4674;4.464 -;-;-;-;-;-;-;-;-;- 560 1 1.892 43258.7 1.0 3314 3419 6729 DOHH2_400M_050219_2,6735 DOHH2_400M_050219_2,6735,SEIEDSTKQVF True True SEIEDSTKQVF 36.311503 641.812060534954 8268998.0 6729.0 ENSG00000139618|ENST00000380152|BRCA2 6.960865179697673 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6736 36.313 79.0 860060.0 25 0 64215.0 + 759 AERDLYRDTW 10 82 442.2140319477845 1323.6202664435536 3 442.2141296267509 MULTI CID FTMS 0 0 0 6729 579731.75 0.5957390727154026 -1 0.1373062133789062 7 Unmodified _AERDLYRDTW_ ENSG00000242114|ENST00000266263|MTFP1;nc|ENSG00000242114|Q9UDX5-2|MTFP1 39.92294525591503 0.1583807461695373 2 A{I|L}YRDTW 7 3 45.988 0.0 0.0 3.4744 0.0 0.0 400.1698170392594 0.0 400.1698170392594 0.0 12.525179276955704 0.0 0.0 0 1.305462187404089 0.0 0.3494850021680094 0.0 A{I|L}YRDTW 3.4744 - 168 1 1.892 61016.6 1.0 3315 3419 6729 DOHH2_400M_050219_2,6736 DOHH2_400M_050219_2,6736,AERDLYRDTW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6737 36.316 133.0 639670.0 25 0 77255.0 + + -1 TVDIQNPDITSSRY 14 64 804.897407974027 1607.780263014854 2 804.8968383669853 MULTI CID FTMS 0 0 0 6729 485233.90625 1.0 0 0.0 8 Carbamidomethyl (C) _LSWRLFFFWC(Carbamidomethyl (C))F_ ENSG00000015285|ENST00000376701|WAS 5.731851221503515 0.8481046878870278 2 {[TV]|[{I|L}S]}D{I|L}QNPD{I|L}TSS[YR] 14 -1 + 117.72 0.0 0.0 7.3218 7.3218 89.767 0.0 0.0 0.0 100.28282596651046 2.120343669168136 2.120343669168136 9.050244867691433 0 1.8807196863200843 1.6989700043360187 0.3807196863200844 1.274227503252014 {[TV]|[{I|L}S]}D{I|L}QNPD{I|L}TSS[YR];{[TV]|[{I|L}S]}D{I|L}QGGPD{I|L}TSS[YR];{[TV]|[{I|L}S]}D{I|L}[AG]NPD{I|L}TSS[YR];{[TV]|[{I|L}S]}D{I|L}[AG]GGPD{I|L}TSS[YR];{[TV]|[{I|L}S]}D{I|L}QNPD{I|L}AA{NN|[MP]|[D{I|L}]|[EV]}[HS];{[TV]|[{I|L}S]}D{I|L}QNP{[MG]|[TS]}VES[YR];{[TV]|[{I|L}S]}D{I|L}QNP{[WT]|[RM]}ES[YR];{[TV]|[{I|L}S]}D{I|L}QYY{I|L}TSS[YR];{[TV]|[{I|L}S]}D{I|L}QNPD[RV]{NN|[MP]|[D{I|L}]|[EV]}[HS];{[TV]|[{I|L}S]}D{I|L}QNPD[KQ][HS]{[QV]|[N{I|L}]|[RA]|[KV]} 7.3218;6.7589;6.7589;6.1972;5.7021;5.4843;5.444;5.3529;5.286;5.1439 -;-;-;-;-;-;-;-;-;- 2467 + 1 1.892 61333.0 1.0 3316 3419 6729 DOHH2_400M_050219_2,6737 DOHH2_400M_050219_2,6737,LSWRLFFFWCF False False TVDIQNPDITSSRY 36.316039 804.896838366985 3817274.75 6729.0 ENSG00000015285|ENST00000376701|WAS 8.037260214487711 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6738 36.319 124.0 535610.0 25 0 67335.0 + 20258 LLDPSQKNLY 10 94 595.8243012326175 1189.6340495320349 2 595.8243286013603 MULTI CID FTMS 0 0 0 6729 431816.15625 0.4442870722237855 -1 0.1373062133789062 9 Unmodified _LLDPSQKNLY_ ENSG00000132010|ENST00000334213|ZNF20;ENSG00000196418|ENST00000543802|ZNF124;ENSG00000196646|ENST00000343979|ZNF136;ENSG00000198040|ENST00000539354|ZNF84;ENSG00000198551|ENST00000361113|ZNF627;ENSG00000223547|ENST00000439326|ZNF844;ENSG00000257446|ENST00000547628|ZNF878;ENSG00000257591|ENST00000439556|ZNF625;ENSG00000277462|ENST00000366503|ZNF670;ENST00000464860.1_1_19:12296590-12298813:+|nuORF;ENST00000476676.1_1_19:12296653-12296758:+|nuORF;ENST00000478942.5_1_19:12246557-12251057:-|nuORF;ENST00000480770.5_3_19:12241465-12247683:-|nuORF;ENST00000539098.5_1_12:133618053-133624816:+|nuORF;ENST00000543124.1_1_12:133624462-133624816:+|nuORF;nc|ENSG00000196418|Q15973-4|ZNF124;nc|ENSG00000196418|Q15973-5|ZNF124;nc|ENSG00000214189|Q6ZQV5-2|ZNF788P;nc|ENSG00000214189|Q6ZQV5|ZNF788P 74.19965305603844 0.0188013450058842 2 [PS]QKN{I|L}D{I|L}{I|L}Y 10 6 + 68.471 0.0 0.0 5.7556 5.7556 77.076 0.0 0.0 0.0 1.5970084286751105 9.226759565325295 1.5970084286751105 1.5970084286751105 0 0.6549471895720984 0.0 0.7742275032520141 1.0356668758921828 [PS]QKN{I|L}D{I|L}{I|L}Y;{[QS]|[NT]}PKN{I|L}D{I|L}{I|L}Y;[PS]QKND{I|L}{I|L}{I|L}Y;{[QS]|[NT]}PKND{I|L}{I|L}{I|L}Y;[PS][AG]KN{I|L}D{I|L}{I|L}Y;[PS]QKGG{I|L}D{I|L}{I|L}Y;{[QS]|[NT]}KPN{I|L}D{I|L}{I|L}Y;{[QS]|[NT]}PKGG{I|L}D{I|L}{I|L}Y;{I|L}{I|L}DP{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}Y;[PS]QKGGD{I|L}{I|L}{I|L}Y 5.7556;5.6214;5.4656;5.3313;4.9853;4.9853;4.8655;4.851;4.7654;4.6952 -;-;-;-;-;-;-;-;-;- 1230 1 1.892 53741.3 1.0 3317 3419 6729 DOHH2_400M_050219_2,6738 DOHH2_400M_050219_2,6738,LLDPSQKNLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6739 36.321 108.0 524180.0 25 0 51891.0 + 2784 ATSKVALVY 9 87 476.2799589157199 950.5453648982398 2 476.2800170779228 MULTI CID FTMS 0 0 0 6729 359850.1875 1.0 0 0.0 10 Unmodified _ATSKVALVY_ ENSG00000110955|ENST00000262030|ATP5F1B 27.628801355627647 0.1796483985696185 2 A{I|L}VY 4 5 33.443 0.0 0.0 3.5183 0.0 0.0 486.2801991193375 0.0 486.2801991193375 0.0 16.453650195120844 0.0 0.0 0 0.5 0.0 0.0 0.0 + A{I|L}VY 3.5183 + + 94 1 1.892 46673.1 1.0 3318 3419 6729 DOHH2_400M_050219_2,6739 DOHH2_400M_050219_2,6739,ATSKVALVY False True ATSKVALVY 36.320872 476.280017077923 2025557.875 6729.0 ENSG00000110955|ENST00000262030|ATP5F1B 7.569391886393229 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6740 36.325 195.0 571650.0 25 0 51172.0 + 20143 LKPGILPVPK 10 121 531.3576326146177 1060.7007122960354 2 531.3577148318291 MULTI CID FTMS 0 0 0 6729 322574.875 0.0940423907373566 4 -0.2450408935546875 11 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 29.43715596616401 0.3072975788498757 2 K{I|L}AP{I|L}VKD{I|L} 9 -1 66.756 0.0 0.0 6.2935 0.0 0.0 0.0 80.05126367740468 80.05126367740468 43.79284113160488 0.0 0.0 0.0 0 1.8494850021680087 0.0 1.0994850021680094 0.0 K{I|L}AP{I|L}VKD{I|L} 6.2935 - 280 + 1 1.892 93116.4 1.0 3319 3419 6729 DOHH2_400M_050219_2,6740 DOHH2_400M_050219_2,6740,LKPGILPVPK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6741 36.331 325.0 605890.0 25 0 203200.0 + 31082 VEATFQRQF 9 116 563.3767439857724 1124.7389350383446 2 563.3773071169853 MULTI CID FTMS 0 0 0 6729 322532.90625 1.0 0 0.0 12 Unmodified _RLLDRKVLL_ nc|ENSG00000058600|Q9NVU0-3|POLR3E;ENSG00000058600|ENST00000299853|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-5|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;nc|ENSG00000058600|Q9NVU0-2|POLR3E 26.020703789607367 0.2001090068861241 2 {I|L}RE 3 7 30.234 0.0 0.0 2.6881 0.0 0.0 0.0 723.4893081791272 723.4893081791272 18.244171855527966 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 {I|L}RE 2.6881 - 56 + 1 1.892 152977.9 1.0 3320 3419 6729 DOHH2_400M_050219_2,6741 DOHH2_400M_050219_2,6741,RLLDRKVLL False False VEATFQRQF 36.330541 563.377307116985 221460.859375 6729.0 nc|ENSG00000058600|Q9NVU0-3|POLR3E;;ENSG00000058600|ENST00000299853|POLR3E;;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;;nc|ENSG00000058600|Q9NVU0-5|POLR3E;;nc|ENSG00000058600|Q9NVU0-4|POLR3E;;nc|ENSG00000058600|Q9NVU0-2|POLR3E 0.0458811273177464 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6742 36.333 119.0 548680.0 25 0 41178.0 + 11255 GESQTLQQF 9 113 519.2487240201622 0 519.2483398318291 PEAK CID FTMS 0 0 0 6729 285963.34375 1.0 0 0.0 13 Unmodified _GESQTLQQF_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 16.942295170755138 0.2326366549411506 2 TDA 3 8 13.188 0.0 0.0 1.2723 0.0 0.0 164.00482001122424 582.3432100885374 746.3480300997617 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TDA 1.2723 - 76 + 1 1.892 52362.8 1.0 3321 3419 6729 DOHH2_400M_050219_2,6742 DOHH2_400M_050219_2,6742,GESQTLQQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6743 36.347 800.0 407820.0 25 0 106250.0 + 761 AERDLYRDTW 10 132 662.8176161211686 1323.6206793091371 2 662.8173095583916 MULTI CID FTMS 0 0 0 6729 233455.6875 0.5216635511277739 -1 0.1373062133789062 14 Unmodified _AERDLYRDTW_ ENSG00000242114|ENST00000266263|MTFP1;nc|ENSG00000242114|Q9UDX5-2|MTFP1 109.14607045052348 0.0032173623903629 2 {[CP]|[EA]}RD{I|L}YRDTW 10 0 + 86.694 0.0 0.0 6.5497 6.5497 85.615 0.0 0.0 0.0 4.259687322722812 65.73062593160506 4.259687322722812 6.480873551196154 0 3.274227503252014 0.0 0.0 1.7856668758921828 + + {[CP]|[EA]}RD{I|L}YRDTW;W{[VA]|[{I|L}G]}D{I|L}YRDTW;{[CP]|[EA]}RD{I|L}YDRTW;WT[PS]{I|L}YRDTW;{[CP]|[EA]}RD{I|L}Y[VG]DT[VS];{[CP]|[EA]}RD{I|L}YD[VG]T[VS];WT{I|L}[PS]YRDTW;{[DA]|[EG]}{[RE]|[WV]}{I|L}YRDTW;{[CP]|[EA]}RD{I|L}{[DS]|[MA]|[CV]|TT}Y{[VA]|[{I|L}G]}W;{[CP]|[EA]}RD{I|L}YR{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA] 6.5497;6.0601;5.9851;5.5108;5.1677;4.603;4.4507;4.3043;4.2837;4.1681 +;-;-;-;-;-;-;-;-;- + 1680 1 1.892 232888.5 0.8899999856948853 3322 3419 6729 DOHH2_400M_050219_2,6743 DOHH2_400M_050219_2,6743,AERDLYRDTW True True AERDLYRDTW 36.346853 662.817309558392 16072477.0 6729.0 ENSG00000242114|ENST00000266263|MTFP1;;nc|ENSG00000242114|Q9UDX5-2|MTFP1 9.620328426361084 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6744 36.351 228.0 443030.0 25 0 25926.0 + 38597 TTDPYLTNSY 10 135 587.7665685635532 1173.5185841939062 2 587.7670165896416 MULTI CID FTMS 0 0 0 6729 219744.65625 0.2365732181973368 -3 0.328369140625 15 Unmodified _TTDPYLTNSY_ ENSG00000182022|ENST00000435907|CHST15;nc|ENSG00000182022|Q7LFX5-2|CHST15 96.11092074494114 0.0088956849251946 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TDTTNSY 10 6 + 72.73 0.0 0.0 6.1976 6.1976 85.085 0.0 0.0 0.0 16.192803136799157 8.066884185923655 8.066884185923655 6.989700043360188 0 1.1069758080123702 1.3010299956639813 1.579689690656103 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TDTTNSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}DTTNSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}DTTTNSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TDTTGGSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}TTTNSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}DTTGGSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}DTTTGGSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}TTTGGSY;[DP]Y{I|L}TTTNSY;[HM]NTTDTQA[VG] 6.1976;5.602;5.4329;5.4167;5.2828;4.8211;4.6519;4.5019;4.4022;4.1584 -;-;-;-;-;-;-;-;-;- 2758 1 1.892 78151.6 1.0 3323 3419 6729 DOHH2_400M_050219_2,6744 DOHH2_400M_050219_2,6744,TTDPYLTNSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6745 36.365 800.0 165490.0 25 0 13208.0 + 26014 NLYERKLL 8 162 524.8110453114883 0 524.8112670779228 PEAK CID FTMS 0 0 0 6729 168490.65625 1.0 0 0.0 16 Unmodified _NLYERKLL_ ENSG00000197299|ENST00000355112|BLM 45.69961567697781 0.1181504488424713 2 {I|L}YE 3 5 19.882 0.0 0.0 1.8979 0.0 0.0 114.04193817981408 525.3515108697874 639.3934490496015 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.2887254899964357 0.0 + {I|L}YE 1.8979 + + 322 + 1 1.892 107586.5 0.7099999785423279 3324 3419 6729 DOHH2_400M_050219_2,6745 DOHH2_400M_050219_2,6745,NLYERKLL True True NLYERKLL 36.364976 524.811267077923 1202137.75 6729.0 ENSG00000197299|ENST00000355112|BLM 2.325265722970168 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6746 36.369 208.0 426990.0 25 0 106900.0 7929 ELRHEIEIF 9 92 395.8801398495346 1184.6185901488038 3 395.8801452517509 MULTI CID FTMS 0 0 0 6729 145006.953125 0.624650501917612 -1 0.1373062133789062 17 Unmodified _ELRHEIEIF_ ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35452707-35454621:-|nuORF;nc|ENSG00000163867|O95789-5|ZMYM6 7.608950283845883 0.6490595679007971 2 ET{M(Oxidation (M))|F} 3 7 23.188 0.0 0.0 1.9574 0.0 0.0 789.4422452162879 0.0 789.4422452162879 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 ET{M(Oxidation (M))|F} 1.9574 - 32 + 1 1.892 75442.2 1.0 3325 3419 6729 DOHH2_400M_050219_2,6746 DOHH2_400M_050219_2,6746,ELRHEIEIF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6747 36.384 800.0 104580.0 25 0 7258.7 -1 QSDIMTMFENN 11 122 681.2710684993358 1360.5275840654715 2 681.2707397341728 MULTI CID FTMS 0 0 0 6729 148110.34375 1.0 0 0.0 18 2 Oxidation (M) _QSDIM(Oxidation (M))TM(Oxidation (M))FENN_ ENSG00000137948|ENST00000399546|BRDT;nc|ENSG00000137948|Q58F21-2|BRDT;nc|ENSG00000137948|Q58F21-3|BRDT;nc|ENSG00000137948|Q58F21-4|BRDT;nc|ENSG00000137948|Q58F21-5|BRDT 18.373094154950223 0.6529654022026722 2 [NS]E{I|L} 4 -1 59.64 0.0 0.0 4.3836 0.0 0.0 0.0 914.302827555959 914.302827555959 34.947274948966935 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 1.066901560044258 0.9802046884880936 [NS]E{I|L} 4.3836 - 939 1 1.892 64936.6 0.699999988079071 3326 3419 6729 DOHH2_400M_050219_2,6747 DOHH2_400M_050219_2,6747,QSDIMTMFENN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6748 36.398 800.0 68000.0 25 0 5156.9 -1 0 84 667.3363682565737 1998.987275369921 3 667.6700927615166 MULTI CID FTMS 0 0 0 6729 123269.5703125 1.0 0 0.0 19 2 S{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 -1 33.188 0.0 0.0 1.6602 0.0 0.0 1599.8177545221415 0.0 1599.8177545221415 0.0 17.703037561203843 0.0 0.0 0 0.5 0.0 0.5 0.0 S{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.6602 - 75 1 1.892 50161.9 0.6399999856948853 3327 3419 6729 DOHH2_400M_050219_2,6748 DOHH2_400M_050219_2,6748, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6749 36.41 698.0 248470.0 25 0 14656.0 + 504 AEGTFPGKI 9 168 460.2484714883759 918.4823900435516 2 460.2472717165947 MULTI CID FTMS 0 0 0 6729 119515.828125 0.7642736784552525 1 -0.1105461120605468 20 Unmodified _AEGTFPGKI_ ENSG00000126267|ENST00000649813|COX6B1 29.081581746732265 0.1611639662936252 2 {[CP]|[EA]}GT{M(Oxidation (M))|F}PGK{I|L} 9 0 + 26.111 0.0 0.0 2.8428 2.8428 74.018 0.0 0.0 0.0 13.921590589602529 8.170284965696588 8.170284965696588 7.596678446896306 0 0.5682503180159344 0.0 0.3807196863200844 0.0 + + {[CP]|[EA]}GT{M(Oxidation (M))|F}PGK{I|L};{[CP]|[EA]}GT{M(Oxidation (M))|F}PKG{I|L};{[CP]|[EA]}GT{M(Oxidation (M))|F}[K{I|L}]GP;{[CP]|[EA]}GT{M(Oxidation (M))|F}PKAV;{[CP]|[EA]}VC(Carbamidomethyl (C)){[TV]|[{I|L}S]}K{I|L};[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PGK{I|L};{[CP]|[EA]}VC(Carbamidomethyl (C))[K{I|L}]S{I|L};[{M(Oxidation (M))|F}V]{[NV]|[RG]}{[CP]|[EA]}K{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{[WT]|[RM]}PGK{I|L};[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PKG{I|L} 2.8428;2.0157;1.4858;1.4584;1.3666;1.3619;0.74425;0.62098;0.58482;0.53477 +;-;-;-;-;-;-;-;-;- + 208 + 1 1.892 133662.9 1.0 3328 3419 6729 DOHH2_400M_050219_2,6749 DOHH2_400M_050219_2,6749,AEGTFPGKI False True AEGTFPGKI 36.40987 460.247271716595 1495929.375 6729.0 ENSG00000126267|ENST00000649813|COX6B1 5.27231486638387 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6751 36.417 245.0 302210.0 25 0 19869.0 + 13775 HSDQQVFEY 9 104 576.7512871874885 1151.488021441777 2 576.7515746951103 MULTI CID FTMS 0 0 0 6750 184230.703125 0.1584652277004297 2 -0.06988525390625 1 Unmodified _HSDQQVFEY_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 51.629811660486645 0.0367964933207742 2 [HS]DQQV{M(Oxidation (M))|F}EY 9 0 + 37.404 0.0 0.0 3.2483 3.2483 77.979 0.0 0.0 0.0 3.0495815253761265 20.414318254237912 3.0495815253761265 9.208187539523752 0 0.9802046884880938 0.0 0.3807196863200844 0.6382104921644451 + + [HS]DQQV{M(Oxidation (M))|F}EY;[HS]D[AG]QV{M(Oxidation (M))|F}EY;[HS]DQ[AG]V{M(Oxidation (M))|F}EY;[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}V[WY]{NN|[MP]|[D{I|L}]|[EV]};[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[DN][NG]{I|L}Y;[H{I|L}]{[QS]|[NT]}[DN]{M(Oxidation (M))|F}EY;[W{M(Oxidation (M))|F}]{[{M(Oxidation (M))|F}D]|MM}V{M(Oxidation (M))|F}EY;[Y{M(Oxidation (M))|F}][EP]{[SA]|[TG]}{M(Oxidation (M))|F}EY;[HS]D[AG][AG]V{M(Oxidation (M))|F}EY;[HS][Q{I|L}][DN]{M(Oxidation (M))|F}EY 3.2483;2.4486;2.4486;2.4265;2.0121;1.9337;1.7599;1.1803;1.0985;0.90274 +;-;-;-;-;-;-;-;-;- + 217 1 1.892 61570.4 1.0 3329 3420 6750 DOHH2_400M_050219_2,6751 DOHH2_400M_050219_2,6751,HSDQQVFEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6752 36.427 578.0 239630.0 25 0 36745.0 + 10326 FSDYISRPE 9 134 557.2642852682962 1112.5140176033924 2 557.2642700076103 MULTI CID FTMS 0 0 0 6750 182045.515625 1.0 0 0.0 2 Unmodified _FSDYISRPE_ ENSG00000183090|ENST00000329798|FREM3 36.506200033944 0.094635877243972 2 {M(Oxidation (M))|F}SDPQG[KA]TY 10 7 + 62.177 0.0 0.0 5.5889 5.5889 75.747 0.0 0.0 0.0 6.915919983620533 6.915919983620533 6.915919983620533 1.136218907515314 0 1.2302046884880935 0.0 0.3494850021680094 0.3807196863200844 {M(Oxidation (M))|F}SDPQG[KA]TY;{M(Oxidation (M))|F}SDPDR{I|L}TY;{M(Oxidation (M))|F}SDPQ[KQ]TY;[DP]R{I|L}GQPDSE;{M(Oxidation (M))|F}SDP[AG]G[KA]TY;[EP][RV]GQPDSE;{M(Oxidation (M))|F}SDP[AG][KQ]TY;[DP]R{I|L}G[AG]PDSE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RH][HV]DSE;[EP][RV]G[AG]PDSE 5.5889;5.4868;5.0884;4.9672;4.7651;4.6659;4.2607;4.1435;3.9681;3.8422 -;-;-;-;-;-;-;-;-;- 785 + 1 1.892 107218.1 1.0 3330 3420 6750 DOHH2_400M_050219_2,6752 DOHH2_400M_050219_2,6752,FSDYISRPE True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6753 36.429 86.0 948950.0 25 0 56853.0 + 17964 KRGEPNTL 8 121 457.7562049534704 913.4978569737408 2 457.7562438845634 MULTI CID FTMS 0 0 0 6750 769290.5 0.4100060458384478 -3 0.340179443359375 3 Unmodified _KRGEPNTL_ REV__ENSG00000060656|ENST00000373779|PTPRU;REV__ENSG00000152894|ENST00000368226|PTPRK;REV__ENST00000524481.5_1_6:128321419-128841710:-|nuORF;REV__ENST00000524534.5_1_6:128384662-128841530:-|nuORF;REV__ENST00000531050.5_1_6:128321419-128718758:-|nuORF;REV__nc|ENSG00000060656|Q92729-3|PTPRU;REV__nc|ENSG00000060656|Q92729-4|PTPRU;REV__nc|ENSG00000060656|Q92729|PTPRU;REV__nc|ENSG00000152894|Q15262-3|PTPRK;REV__nc|ENSG00000152894|Q15262-4|PTPRK;REV__nc|ENSG00000152894|Q15262|PTPRK 19.256988751693697 0.6264283240490721 2 RNVGNT{I|L} 7 -1 53.581 0.0 0.0 5.8654 0.0 0.0 141.0791950910172 0.0 141.0791950910172 0.0 14.116067214497306 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.2887254899964357 RNVGNT{I|L} 5.8654 - 640 1 1.892 69220.7 1.0 3331 3420 6750 DOHH2_400M_050219_2,6753 DOHH2_400M_050219_2,6753,KRGEPNTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6754 36.431 70.0 882430.0 25 0 85955.0 + 45409 YTDATPLRV 9 97 518.2760307631644 1034.537508593129 2 518.2773925662041 MULTI CID FTMS 0 0 0 6750 551799.875 1.0 0 0.0 4 Unmodified _YTDATPLRV_ ENSG00000185163|ENST00000397333|DDX51;ENST00000329073.8_1_12:132625785-132627411:-|nuORF;ENST00000545991.1_1_12:132626393-132626546:-|nuORF;ENST00000546058.1_1_12:132626393-132626917:-|nuORF 45.69961567697781 0.0497987121815769 2 YTDATV[RP]{I|L} 9 3 + 76.347 0.0 0.0 7.3798 7.3798 92.569 0.0 0.0 0.0 61.36456369399517 1.917463906918499 1.917463906918499 9.719712763997563 0 0.9476212463643422 2.0 0.3807196863200844 0.4247425010840047 YTDATV[RP]{I|L};YTDAT[R{I|L}][VP];YTDV[TA][RP]{I|L};YTVD[TA][RP]{I|L};YTV[NP][KG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};YTV[NP][{M(Oxidation (M))|F}V][VP] 7.3798;6.4403;4.8658;4.3319;3.7426;2.8073 -;-;-;-;-;- 156 + 1 1.892 50330.5 1.0 3332 3420 6750 DOHH2_400M_050219_2,6754 DOHH2_400M_050219_2,6754,YTDATPLRV True True YTDATPLRV 36.430705 518.277392566204 2991531.75 6750.0 ENSG00000185163|ENST00000397333|DDX51;;ENST00000545991.1_1_12:132626393-132626546:-|nuORF;;ENST00000329073.8_1_12:132625785-132627411:-|nuORF;;ENST00000546058.1_1_12:132626393-132626917:-|nuORF 6.356651782989502 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6755 36.433 99.0 440240.0 25 0 82011.0 + 30085 QVDPNYAYAY 10 61 602.269628647593 1202.524704361986 2 602.2698242068291 MULTI CID FTMS 0 0 0 6750 445243.28125 1.0 0 0.0 5 Unmodified _QVDPNYAYAY_ ENSG00000004897|ENST00000066544|CDC27;ENST00000425026.1_1_Y:10028050-10028227:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 20.41453444215458 0.5050059513928961 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YYRAY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 9 5 + 43.636 0.0 0.0 3.6287 3.6287 73.836 0.0 0.0 0.0 2.356180578496776 28.1509840653446 2.356180578496776 5.6427143043856205 0 0.5 1.5228787452803376 0.4247425010840047 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YYRAY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NP]D[VG]AY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[NP]YAD[VG]AY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[NP]D{[QV]|[N{I|L}]|[RA]|[KV]}YAY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YY[VG]AY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};YY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RAY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};YY{[QV]|[N{I|L}]|[RA]|[KV]}YAY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q][HK]Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[NP]D{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG]AY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};YY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG]AY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 3.6287;3.1594;2.9516;2.6551;2.5463;2.5087;2.4058;1.9225;1.6427;1.4264 -;-;-;-;-;-;-;-;-;- 148 1 1.892 34946.7 1.0 3333 3420 6750 DOHH2_400M_050219_2,6755 DOHH2_400M_050219_2,6755,QVDPNYAYAY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6756 36.435 115.0 845170.0 25 0 119390.0 + 45416 YTDFDGTRVY 10 74 618.7799248705649 1235.5452968079296 2 618.7800781130791 MULTI CID FTMS 0 0 0 6750 376807.65625 0.2282829644042874 -3 0.340179443359375 6 Unmodified _YTDFDGTRVY_ ENSG00000102096|ENST00000376509|PIM2;ENSG00000137193|ENST00000373509|PIM1;ENSG00000198355|ENST00000360612|PIM3;nc|ENSG00000137193|P11309-2|PIM1 49.74193281347159 0.0816655385645911 2 YTD{M(Oxidation (M))|F}DGTRVY 10 0 + 107.91 0.0 0.0 8.734 8.734 97.168 0.0 0.0 0.0 92.63419102003724 14.146518864155126 14.146518864155126 22.272437815030628 0 1.6989700043360187 2.0 0.4247425010840047 0.0 + + YTD{M(Oxidation (M))|F}DGTRVY;YTD{M(Oxidation (M))|F}D[WK]VY;YTD{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[VG]VY;YTD{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]};[{M(Oxidation (M))|F}V]D{[CA]|SS}RV[YT]Y;[{M(Oxidation (M))|F}V]D{[CA]|SS}R[YT]VY;[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))E]|[WC]}RV[YT]Y;[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))E]|[WC]}R[YT]VY;{[{M(Oxidation (M))|F}D]|MM}[WK]DV[YT]Y;{[{M(Oxidation (M))|F}D]|MM}[WK]D[YT]VY 8.734;6.9313;6.186;3.676;1.5136;1.5037;0.98496;0.975;0.76557;0.75561 +;-;-;-;-;-;-;-;-;- + 439 + 1 1.892 74867.1 1.0 3334 3420 6750 DOHH2_400M_050219_2,6756 DOHH2_400M_050219_2,6756,YTDFDGTRVY True True YTDFDGTRVY 36.435259 618.780078113079 36168024.0 6750.0 ENSG00000198355|ENST00000360612|PIM3;;nc|ENSG00000137193|P11309-2|PIM1;;ENSG00000137193|ENST00000373509|PIM1;;ENSG00000102096|ENST00000376509|PIM2 8.995570500691732 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6757 36.439 205.0 333670.0 25 0 22247.0 + 39680 VEELFERKY 9 86 404.87983568043865 1211.617677641516 3 404.8800536990166 MULTI CID FTMS 0 0 0 6750 265015.15625 0.97596018402242 -2 0.2478523254394531 7 Unmodified _VEELFERKY_ ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 45.69961567697781 0.0497987121815769 2 VEE{I|L}{M(Oxidation (M))|F}ERKY 9 0 + 72.669 0.0 0.0 5.9977 5.9977 91.722 0.0 0.0 0.0 48.50171114005629 9.46372858424762 9.46372858424762 25.0 0 0.1989700043360188 2.0 0.5 0.75 + + VEE{I|L}{M(Oxidation (M))|F}ERKY;VY[HA]{M(Oxidation (M))|F}ERKY;{[TV]|[{I|L}S]}[HK]E{M(Oxidation (M))|F}{I|L}[HC]V;[{M(Oxidation (M))|F}E]KR{I|L}[YE]EV;[RK]E{M(Oxidation (M))|F}{I|L}[YE]EV;{[TV]|[{I|L}S]}{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}[YE]EV;{[TV]|[{I|L}S]}[HK]E{M(Oxidation (M))|F}[HA]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[AG][Y{I|L}]R{I|L}[YE]EV;[RK][Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[HA]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[TV]|[{I|L}S]}{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}[{M(Oxidation (M))|F}E]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.9977;3.9344;3.3159;2.7267;2.1346;1.9515;1.7683;1.5025;0.65232;0.40397 +;-;-;-;-;-;-;-;-;- + 322 + 1 1.892 60413.6 1.0 3335 3420 6750 DOHH2_400M_050219_2,6757 DOHH2_400M_050219_2,6757,VEELFERKY True True VEELFERKY 36.439157 404.880053699017 1615849.375 6750.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENSG00000263001|ENST00000573035|GTF2I 4.79515806833903 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6758 36.444 242.0 265970.0 25 0 37864.0 15756 ISCWNFLY 8 100 523.243752531071 0 523.2446166872978 PEAK CID FTMS 0 0 0 6750 145103.953125 0.9477591399614044 -1 0.1105461120605468 8 Unmodified _ISCWNFLY_ ENSG00000134897|ENST00000257336|BIVM;ENST00000490317.1_1_13:103473357-103492212:+|nuORF 39.957323273325 0.1410752012386504 2 SEP 3 7 23.188 0.0 0.0 2.22 0.0 0.0 113.08335758495704 615.2398165338499 728.323174118807 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.3494850021680094 0.0 SEP 2.22 - 32 + 1 1.892 55103.7 1.0 3336 3420 6750 DOHH2_400M_050219_2,6758 DOHH2_400M_050219_2,6758,ISCWNFLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6759 36.458 800.0 130840.0 25 0 8199.9 43510 WWWWIWWQWW 10 111 874.9037639281709 1747.7929749231416 2 875.8990966677666 MULTI CID FTMS 0 0 0 6750 125032.1328125 0.0868107113290194 12 -0.7047042846679688 9 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 2 [NP]{I|L}DY{I|L}{M(Oxidation (M))|F}DAD{I|L}NP{[QN]|[E{I|L}]|[KN]} 15 14 + 62.59 0.0 0.0 3.5811 3.5811 71.769 0.0 0.0 0.0 13.46787486224656 44.402821967095605 13.46787486224656 3.679767852945943 0 0.242992819099939 0.0 0.3494850021680094 1.4604093769761874 [NP]{I|L}DY{I|L}{M(Oxidation (M))|F}DAD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DY{I|L}{M(Oxidation (M))|F}WD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DY{I|L}{M(Oxidation (M))|F}DW{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DY{I|L}{M(Oxidation (M))|F}DAD{I|L}GGP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DY{I|L}{M(Oxidation (M))|F}WD{I|L}GGP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DY{I|L}{M(Oxidation (M))|F}DW{I|L}GGP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DY{I|L}{M(Oxidation (M))|F}DAD{I|L}{[HG]|PP}MQ;[NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAD{I|L}NP{[QN]|[E{I|L}]|[KN]};[DP]{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}{M(Oxidation (M))|F}DAD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DY{I|L}{M(Oxidation (M))|F}WD{I|L}{[HG]|PP}MQ 3.5811;3.3706;3.1983;3.0644;2.8528;2.6805;2.6375;2.539;2.463;2.4269 -;-;-;-;-;-;-;-;-;- 1241 1 1.892 72367.1 0.5400000214576721 3337 3420 6750 DOHH2_400M_050219_2,6759 DOHH2_400M_050219_2,6759,WWWWIWWQWW False False False False splicing PXD020620_cell_line DOHH2_400M_050219_2 6760 36.471 800.0 115210.0 25 0 9775.3 + 35614 STYNYPYYPFY 11 104 739.3206734216737 1476.6267939101474 2 739.3195678591728 MULTI CID FTMS 0 0 0 6750 97240.875 1.0 0 0.0 10 Unmodified _STYNYPYYPFY_ REV__ENSG00000136040|ENST00000258526|PLXNC1 9.38312468134398 0.8308777417566128 2 {[QG]|[NA]}G[HQ]EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 80.73 0.0 0.0 5.4672 5.4672 81.515 0.0 0.0 0.0 6.4301859900686935 10.696083918116416 6.4301859900686935 6.4301859900686935 0 0.8182503180159344 0.8239087409443188 0.6203715150305281 1.4049471895720984 {[QG]|[NA]}G[HQ]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HQ]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HQ]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HQ]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HQ]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[CS]NAQQNA{M(Oxidation (M))|F}Y;[AG]N[HQ]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HQ]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HQ]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HQ]EAQQGGA{M(Oxidation (M))|F}Y 5.4672;5.0317;4.8528;4.8528;4.8528;4.7199;4.6661;4.4155;4.4155;4.4155 -;-;-;-;-;-;-;-;-;- 2663 1 1.892 67395.4 0.5299999713897705 3338 3420 6750 DOHH2_400M_050219_2,6760 DOHH2_400M_050219_2,6760,STYNYPYYPFY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6762 36.477 101.0 497860.0 25 0 86676.0 + 26084 NPDLELAR 8 75 464.249984998628 926.485417064056 2 464.2503539919853 MULTI CID FTMS 0 0 0 6761 340026.65625 0.2050104584820045 2 -0.0729904174804687 1 Unmodified _NPDLELAR_ REV__ENSG00000133026|ENST00000360416|MYH10;REV__nc|ENSG00000133026|P35580-2|MYH10;REV__nc|ENSG00000133026|P35580-3|MYH10;REV__nc|ENSG00000133026|P35580-5|MYH10;REV__nc|ENSG00000133026|P35580|MYH10 23.1484247019978 0.5573009939494978 2 Y{I|L}YE{I|L}AR 7 -1 + 84.504 0.0 0.0 9.1209 9.1209 99.236 0.0 0.0 0.0 69.89970682348377 23.908671882634444 23.908671882634444 84.50380059324564 0 0.4247425010840047 2.0 0.2614393726401688 1.0387254899964358 Y{I|L}YE{I|L}AR 9.1209 - 52 + 1 1.901 44984.2 1.0 3339 3421 6761 DOHH2_400M_050219_2,6762 DOHH2_400M_050219_2,6762,NPDLELAR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6763 36.48 111.0 484120.0 25 0 50788.0 + 8377 ESDSRQIFY 9 83 572.7664941130179 1143.5184352928356 2 573.2585327029228 MULTI CID FTMS 0 0 0 6761 247624.09375 0.9720476994531352 -2 0.1720504760742187 2 Unmodified _ESDSRQIFY_ ENSG00000145740|ENST00000396591|SLC30A5;ENST00000507354.5_1_5:68398890-68419336:+|nuORF;nc|ENSG00000145740|Q8TAD4-2|SLC30A5 37.97399986684836 0.0865783450051559 2 E{I|L}{M(Oxidation (M))|F}Y 4 5 33.805 0.0 0.0 2.9562 0.0 0.0 573.2497425763687 0.0 573.2497425763687 0.0 26.357828494520703 0.0 0.0 0 0.9247425010840048 0.0 0.8807196863200843 0.0 E{I|L}{M(Oxidation (M))|F}Y 2.9562 - 64 1 1.901 46358.5 1.0 3340 3421 6761 DOHH2_400M_050219_2,6763 DOHH2_400M_050219_2,6763,ESDSRQIFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6765 36.488 283.0 209110.0 25 0 28237.0 + 23126 LSPLGYACL 9 85 468.7473610346042 935.4801691360084 2 468.7472411990166 MULTI CID FTMS 0 0 0 6764 112968.234375 0.3091965215874042 1 -0.0646095275878906 1 Unmodified _LSPLGYACL_ REV__ENSG00000144445|ENST00000281772|KANSL1L;REV__nc|ENSG00000144445|A0AUZ9-2|KANSL1L 18.13498045792455 0.3457906370836843 2 {I|L}T 2 -1 23.184 0.0 0.0 2.4783 0.0 0.0 0.0 718.3284449320802 718.3284449320802 11.925181884344475 0.0 0.0 0.0 0 0.2215141619232908 0.0 0.0 0.0 {I|L}T 2.4783 - 3 + 1 1.901 50614.0 1.0 3341 3422 6764 DOHH2_400M_050219_2,6765 DOHH2_400M_050219_2,6765,LSPLGYACL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6766 36.49 145.0 640570.0 25 0 59273.0 + 32881 SEIENVHGF 9 100 516.2429980274625 1030.4714431217249 2 516.2433349490166 MULTI CID FTMS 0 0 0 6764 445428.6875 0.4270950966091801 -3 0.1804313659667968 2 Unmodified _SEIENVHGF_ ENSG00000075711|ENST00000667157|DLG1;ENST00000471733.5_1_3:196807912-197024075:-|nuORF;ENST00000485409.5_1_3:196921289-197023334:-|nuORF;nc|ENSG00000075711|Q12959-2|DLG1;nc|ENSG00000075711|Q12959-3|DLG1;nc|ENSG00000075711|Q12959-5|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959|DLG1 30.63653989081413 0.1413794767160703 2 {[ES]|[DT]|[{I|L}C]}{I|L}EGGVHG{M(Oxidation (M))|F} 10 2 + 48.044 0.0 0.0 4.6623 4.6623 75.243 0.0 0.0 0.0 27.664962656759883 4.070519340220159 4.070519340220159 3.521825181113627 0 0.7742275032520141 0.0 0.4247425010840047 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}EGGVHG{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}EGRHG{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}ENVHG{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}EGG[RH]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}EN[RH]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]}D[VP];{[ES]|[DT]|[{I|L}C]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}RHW;{[ES]|[DT]|[{I|L}C]}[W{I|L}]GVHG{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}WWD[VP];{[ES]|[DT]|[{I|L}C]}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 4.6623;4.3206;4.0284;3.695;3.0664;2.1929;2.1306;1.7496;1.5643;1.5389 -;-;+;-;-;-;-;-;-;- + 533 + 1 1.901 75843.4 1.0 3342 3422 6764 DOHH2_400M_050219_2,6766 DOHH2_400M_050219_2,6766,SEIENVHGF False True SEIENVHGF 36.490412 516.243334949017 14124919.0 6764.0 nc|ENSG00000075711|Q12959-6|DLG1;;nc|ENSG00000075711|Q12959-3|DLG1;;nc|ENSG00000075711|Q12959-2|DLG1;;ENSG00000075711|ENST00000667157|DLG1;;nc|ENSG00000075711|Q12959-7|DLG1;;nc|ENSG00000075711|Q12959-5|DLG1;;ENST00000471733.5_1_3:196807912-197024075:-|nuORF;;ENST00000485409.5_1_3:196921289-197023334:-|nuORF;;nc|ENSG00000075711|Q12959|DLG1 7.123898347218831 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6767 36.493 149.0 595610.0 25 0 107120.0 + 16256 IVSAQNLLK 9 96 493.3056601287906 984.5967673243812 2 493.3056823611259 MULTI CID FTMS 0 0 0 6764 456440.3125 0.542129827379147 -2 0.06988525390625 3 Unmodified _IVSAQNLLK_ L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;nc|ENSG999|O00370|L1_ORF2 38.17557092003332 0.0854718145212029 2 {I|L}VSAQN{I|L}{I|L}K 9 0 + 77.197 0.0 0.0 7.8405 7.8405 89.541 0.0 0.0 0.0 36.47817481888637 7.616280323235642 7.616280323235642 7.616280323235642 0 0.75 2.0 0.0 0.1595680409956017 + + {I|L}VSAQN{I|L}{I|L}K;{I|L}VSAQN{I|L}K{I|L};{I|L}VSAQGG{I|L}{I|L}K;{I|L}VSA[AG]N{I|L}{I|L}K;{I|L}VSAQGG{I|L}K{I|L};{I|L}VSA[AG]N{I|L}K{I|L};{I|L}VSA[AG]GG{I|L}{I|L}K;{I|L}VSA[{I|L}V]QQK;{I|L}VSA[AG]GG{I|L}K{I|L};{I|L}VSA[{I|L}V][RD]{I|L} 7.8405;7.0669;6.9053;6.9053;6.1317;6.1317;5.9745;5.5015;5.2009;4.7279 +;-;-;-;-;-;-;-;-;- + 260 + 1 1.901 71198.7 1.0 3343 3422 6764 DOHH2_400M_050219_2,6767 DOHH2_400M_050219_2,6767,IVSAQNLLK True True IVSAQNLLK 36.493369 493.305682361126 11567820.0 6764.0 nc|ENSG999|O00370|L1_ORF2;;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;;L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense 6.336926460266113 2.0 True 9.0 False ERV PXD020620_cell_line DOHH2_400M_050219_2 6768 36.496 103.0 463290.0 25 0 32215.0 + 6334 DVKGRIYQL 9 76 546.3142445473059 0 546.3139526247978 PEAK CID FTMS 0 0 0 6764 355208.40625 0.037365174425069 7 -0.2964668273925781 4 Unmodified _DVKGRIYQL_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000536090.1_1_12:6626539-6627126:+|nuORF;ENST00000542472.1_1_12:6626979-6631036:+|nuORF 23.1484247019978 0.1725298825155634 2 K 1 8 13.979 0.0 0.0 1.2818 0.0 0.0 214.09542670969603 745.3990028464909 959.494429556187 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.4247425010840047 + K 1.2818 + + 9 + 1 1.901 43205.2 1.0 3344 3422 6764 DOHH2_400M_050219_2,6768 DOHH2_400M_050219_2,6768,DVKGRIYQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6769 36.5 230.0 393190.0 25 0 23816.0 + 7744 ELEKKLVAI 9 131 521.8283369630916 1041.642120992983 2 521.8290893435478 MULTI CID FTMS 0 0 0 6764 222054.59375 0.6488644467882075 -1 0.0083808898925781 5 Unmodified _ELEKKLVAI_ ENSG00000155561|ENST00000285968|NUP205 58.6788170122104 0.0268135626297836 2 {I|L}EEK 4 6 44.017 0.0 0.0 4.2257 0.0 0.0 0.0 539.3564547174436 539.3564547174436 24.31031895404267 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.3252574989159953 0.0 {I|L}EEK 4.2257 - 488 + 1 1.901 72947.5 1.0 3345 3422 6764 DOHH2_400M_050219_2,6769 DOHH2_400M_050219_2,6769,ELEKKLVAI True True ELEKKLVAI 36.499933 521.829089343548 2087743.25 6764.0 ENSG00000155561|ENST00000285968|NUP205 3.589451471964518 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6770 36.505 273.0 346450.0 25 0 47664.0 + 34346 SLSPTRLLSL 10 137 362.88877475885 1085.64449487675 3 362.8881408572197 MULTI CID FTMS 0 0 0 6764 171812.921875 0.7442606080735021 -1 0.0083808898925781 6 Unmodified _SLSPTRLLSL_ ENSG00000161681|ENST00000293441|SHANK1;nc|ENSG00000161681|Q9Y566-2|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1 29.081581746732265 0.3152867722954398 2 T{I|L}K[YN]S{I|L} 7 7 30.411 0.0 0.0 2.8012 0.0 0.0 248.17545643746104 0.0 248.17545643746104 0.0 21.11896034438779 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 T{I|L}K[YN]S{I|L} 2.8012 - 437 + 1 1.901 83586.1 1.0 3346 3422 6764 DOHH2_400M_050219_2,6770 DOHH2_400M_050219_2,6770,SLSPTRLLSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6771 36.513 482.0 281560.0 25 0 16177.0 + 8753 EVREKLTVL 9 142 543.8292566068869 1085.6439602805738 2 543.8295165896416 MULTI CID FTMS 0 0 0 6764 152373.53125 0.6090599033551517 -1 0.0083808898925781 7 Unmodified _EVREKLTVL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 59.36838082759317 0.0264317782606298 2 {NN|[MP]|[D{I|L}]|[EV]}REK{I|L}TV{I|L} 9 0 + 59.166 0.0 0.0 5.4499 5.4499 86.657 0.0 0.0 0.0 8.725635714287918 31.9622725880631 8.725635714287918 10.353582552641498 0 1.0 1.6989700043360187 1.805462187404089 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}REK{I|L}TV{I|L};{[QN]|[E{I|L}]|[KN]}[RD]K{I|L}TV{I|L};{NN|[MP]|[D{I|L}]|[EV]}REK{I|L}S{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[KA]{[CP]|[EA]}{I|L}TV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}]K{I|L}TV{I|L};[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}{[CP]|[EA]}{I|L}TV{I|L};{[QN]|[E{I|L}]|[KN]}[RD]K{I|L}S{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}REKVT{I|L}{I|L};{[TV]|[{I|L}S]}[Q{I|L}]{[CP]|[EA]}{I|L}GKK;{[QN]|[E{I|L}]|[KN]}[KA]{[CP]|[EA]}{I|L}S{I|L}{I|L} 5.4499;4.4962;4.2069;4.1297;3.7681;3.4072;3.2532;3.0765;3.0548;2.8866 +;-;-;-;-;-;-;-;-;- + 719 1 1.901 106421.2 1.0 3347 3422 6764 DOHH2_400M_050219_2,6771 DOHH2_400M_050219_2,6771,EVREKLTVL True True EVREKLTVL 36.513494 543.829516589642 1543538.75 6764.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 2.407355229059855 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6772 36.525 643.0 293250.0 25 0 23108.0 + 26385 NTDFYQTSY 9 199 569.7379480278096 1137.461343122419 2 569.7382690310478 MULTI CID FTMS 0 0 0 6764 134482.390625 1.0 0 0.0 8 Unmodified _NTDFYQTSY_ ENSG00000145817|ENST00000274496|YIPF5;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;ENST00000522203.5_1_5:143545115-143549519:-|nuORF;nc|ENSG00000145817|Q969M3-3|YIPF5 39.94969957227396 0.0757326808254658 2 {[QS]|[NT]}D{M(Oxidation (M))|F}Y 5 4 35.202 0.0 0.0 3.0948 0.0 0.0 0.0 494.1883688394691 494.1883688394691 13.290645474441348 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.109724654087736 0.1595680409956017 + {[QS]|[NT]}D{M(Oxidation (M))|F}Y 3.0948 + + 1834 1 1.901 140063.8 1.0 3348 3422 6764 DOHH2_400M_050219_2,6772 DOHH2_400M_050219_2,6772,NTDFYQTSY True True NTDFYQTSY 36.524706 569.738269031048 1133589.125 6764.0 ENST00000522203.5_1_5:143545115-143549519:-|nuORF;;ENST00000508754.1_1_5:143543641-143549519:-|nuORF;;ENSG00000145817|ENST00000274496|YIPF5;;nc|ENSG00000145817|Q969M3-3|YIPF5 2.402965863545736 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6773 36.527 115.0 529570.0 25 0 101130.0 + 45282 YSDKYGLGY 9 91 533.2481922105937 1064.4818314879874 2 533.2483398318291 MULTI CID FTMS 0 0 0 6764 292385.21875 0.6293700794763846 -2 0.06988525390625 9 Unmodified _YSDKYGLGY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 39.94969957227396 0.0757326808254658 2 YS[HT]DK{M(Oxidation (M))|F}T 8 7 45.36 0.0 0.0 4.2612 0.0 0.0 0.0 82.06686578922108 82.06686578922108 23.15343460101261 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.3807196863200844 0.0 YS[HT]DK{M(Oxidation (M))|F}T 4.2612 - 329 + 1 1.901 49165.2 1.0 3349 3422 6764 DOHH2_400M_050219_2,6773 DOHH2_400M_050219_2,6773,YSDKYGLGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6774 36.531 175.0 396630.0 25 0 46320.0 27875 PLSALPPP 8 84 396.2374189293871 790.4602849255741 2 396.2373535037041 MULTI CID FTMS 0 0 0 6764 143893.015625 0.6629942812383799 -1 0.0083808898925781 10 Unmodified _PLSALPPP_ ENSG00000186918|ENST00000344423|ZNF395 46.92087301778293 0.1537303740847981 2 P{I|L}SA{I|L}KY 7 3 + 61.744 0.0 0.0 7.8111 7.8111 95.196 0.0 0.0 0.0 40.77455389734872 12.825382125373965 12.825382125373965 16.786662482156345 0 1.3539171939081172 2.0 0.0 0.0 P{I|L}SA{I|L}KY;[{I|L}P]SA{I|L}KY;P{I|L}[KG][{I|L}T]Y;P{I|L}[KG][YT]{I|L};P{I|L}SA[YK]{I|L};{[SA]|[TG]}{I|L}P{I|L}KY 7.8111;5.6874;5.4707;4.8316;4.6991;1.8575 -;-;-;-;-;- 69 + 1 1.901 64516.3 1.0 3350 3422 6764 DOHH2_400M_050219_2,6774 DOHH2_400M_050219_2,6774,PLSALPPP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6775 36.544 800.0 61631.0 25 0 16673.0 -1 0 44 1094.1213136282834 3279.3421114850503 3 1094.454760730267 MULTI CID FTMS 0 0 0 6764 102599.890625 0.6997382053055652 -1 0.0083808898925781 11 2 GYWC 4 -1 15.662 0.0 0.0 0.47759 0.0 0.0 1856.6557339519688 910.4764498346312 2767.1321837866 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYWC 0.47759 - 39 + 1 1.901 48704.7 0.4900000095367431 3351 3422 6764 DOHH2_400M_050219_2,6775 DOHH2_400M_050219_2,6775, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6777 36.552 257.0 216760.0 25 0 15326.0 30359 RAGKVAHS 8 102 413.238996635502 824.463440337804 2 413.2386657595634 MULTI CID FTMS 0 0 0 6776 111181.7734375 0.2345010423574329 -13 1.2340087890625 1 Unmodified _RAGKVAHS_ ENST00000560141.2_1_15:45021411-45021504:+|nuORF 8.593279151180031 0.7721714526254883 2 {[{M(Oxidation (M))|F}H]|[RQ]}K 3 6 8.4335 0.0 0.0 1.0229 0.0 0.0 0.0 409.1783467510522 409.1783467510522 1.4437735970130756 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.2887254899964357 {[{M(Oxidation (M))|F}H]|[RQ]}K 1.0229 - 15 1 1.901 45743.1 1.0 3352 3423 6776 DOHH2_400M_050219_2,6777 DOHH2_400M_050219_2,6777,RAGKVAHS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6778 36.559 382.0 202360.0 25 0 15979.0 41257 VPGQALLT 8 123 399.7382980693085 0 399.7383911013603 PEAK CID FTMS 0 0 0 6776 120541.7265625 0.9669793471213056 5 -0.1944313049316406 2 Unmodified _VPGQALLT_ ENST00000478299.1_1_1:12091250-12091862:+|nuORF 2.577480529830294 0.5910327097116076 2 V 1 7 2.4743 0.0 0.0 0.31027 0.0 0.0 416.2266438907671 279.14548669986567 695.3721305906328 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.31027 + + 1 + 1 1.901 65259.6 1.0 3353 3423 6776 DOHH2_400M_050219_2,6778 DOHH2_400M_050219_2,6778,VPGQALLT False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6779 36.561 133.0 633100.0 25 0 65555.0 + 6290 DVDIRKDLY 9 89 568.8008399055332 1135.5871268778662 2 568.8010742068291 MULTI CID FTMS 0 0 0 6776 346001.75 0.1649276264532088 -4 0.2450408935546875 3 Unmodified _DVDIRKDLY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP 44.94466952835103 0.0514539652423294 2 DVD{I|L}[VG][R{I|L}]SY 10 4 + 62.445 0.0 0.0 5.4989 5.4989 88.968 0.0 0.0 0.0 12.531508201060896 2.408037477650637 2.408037477650637 19.84250962403124 0 1.305462187404089 2.0 0.3807196863200844 0.0 DVD{I|L}[VG][R{I|L}]SY;{NN|[MP]|[D{I|L}]|[EV]}[RK]DVD{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}[RK]{I|L}D[DV]Y;{NN|[MP]|[D{I|L}]|[EV]}[RK]D{I|L}[DV]Y 5.4989;3.7516;2.3415;2.0764 -;-;-;- 164 + 1 1.901 66962.1 1.0 3354 3423 6776 DOHH2_400M_050219_2,6779 DOHH2_400M_050219_2,6779,DVDIRKDLY True True DVDIRKDLY 36.561235 568.801074206829 26877604.0 6776.0 ENSG00000196604|ENST00000409914|POTEF;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000188219|ENST00000683005|POTEE;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;;ENSG00000196834|ENST00000451531|POTEI;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENSG00000169067|ENST00000423391|ACTBL2;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;;ENSG00000222038|ENST00000409602|POTEJ;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENSG00000075624|ENST00000646664|ACTB 6.799294471740723 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6780 36.565 173.0 325080.0 25 0 20780.0 28639 PVILNTTQI 9 88 499.7971105526356 997.5796681720713 2 499.7970764040947 MULTI CID FTMS 0 0 0 6776 165100.171875 0.7715597884463307 -1 0.0646095275878906 4 Unmodified _PVILNTTQI_ ENSG00000121931|ENST00000369763|LRIF1 26.88365393820708 0.1891292719743517 2 {[QN]|[E{I|L}]|[KN]}G 3 7 24.995 0.0 0.0 2.5056 0.0 0.0 0.0 695.4079817309181 695.4079817309181 7.881922257237793 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.2134679910804404 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}G 2.5056 - 245 1 1.901 49403.2 1.0 3355 3423 6776 DOHH2_400M_050219_2,6780 DOHH2_400M_050219_2,6780,PVILNTTQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6781 36.569 262.0 345660.0 25 0 27389.0 + 40671 VLEVQSSAISL 11 127 382.55260626083947 1144.6359893827184 3 382.5521728396416 MULTI CID FTMS 0 0 0 6776 143561.0 0.5918422823037308 -4 0.2450408935546875 5 Unmodified _VLEVQSSAISL_ REV__ENSG00000087237|ENST00000200676|CETP;REV__nc|ENSG00000087237|P11597-2|CETP 11.494710602746466 0.7960433852372589 2 T{I|L} 2 -1 24.253 0.0 0.0 2.1188 0.0 0.0 912.4930320155116 0.0 912.4930320155116 0.0 13.539171939081172 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 T{I|L} 2.1188 - 34 1 1.901 75919.0 1.0 3356 3423 6776 DOHH2_400M_050219_2,6781 DOHH2_400M_050219_2,6781,VLEVQSSAISL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6782 36.575 287.0 340430.0 25 0 61025.0 33196 SFHFYCLDF 9 138 393.503419816981 1177.488430051143 3 393.5034973025322 MULTI CID FTMS 0 0 0 6776 143763.0 0.29587970104703 -3 0.1344947814941406 6 Unmodified _SFHFYCLDF_ ENST00000354485.5_1_9:730997-731267:+|nuORF 4.897010918128616 0.7437319958283661 2 {M(Oxidation (M))|F}S{I|L}V{M(Oxidation (M))|F}Y 6 7 24.308 0.0 0.0 2.0644 0.0 0.0 403.086038548993 0.0 403.086038548993 0.0 3.1004172559177583 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}S{I|L}V{M(Oxidation (M))|F}Y 2.0644 - 308 + 1 1.901 79082.0 1.0 3357 3423 6776 DOHH2_400M_050219_2,6782 DOHH2_400M_050219_2,6782,SFHFYCLDF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6783 36.589 800.0 353590.0 25 0 26174.0 + 6292 DVDIRKDLY 9 221 379.5361995909293 1135.586769372988 3 379.5359374880791 MULTI CID FTMS 0 0 0 6776 124822.78125 0.1307680013158224 -5 0.3823471069335937 7 Unmodified _DVDIRKDLY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP 39.21299971606389 0.0797768173001226 2 DVD{I|L}R 5 4 56.797 0.0 0.0 5.0015 0.0 0.0 0.0 534.2567232721311 534.2567232721311 26.980756419024623 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.6861818737241735 + DVD{I|L}R 5.0015 + + 459 + 1 1.901 221874.0 0.449999988079071 3358 3423 6776 DOHH2_400M_050219_2,6783 DOHH2_400M_050219_2,6783,DVDIRKDLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6785 36.593 13.0 3637800.0 25 0 223120.0 + 2690 ATEDPWKTNY 10 69 612.7801090649566 1223.5456651967131 2 612.7805663943291 MULTI CID FTMS 0 0 0 6784 3995607.25 0.1339360304095513 6 -0.2997055053710937 1 Unmodified _ATEDPWKTNY_ ENSG00000139684|ENST00000378720|ESD 49.55428908609986 0.0827668555218455 2 [WP]KD[PS]PD 8 8 42.14 0.0 0.0 3.4441 0.0 0.0 0.0 298.1064921832944 298.1064921832944 15.48455006504028 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.4247425010840047 [WP]KD[PS]PD 3.4441 - 352 1 1.915 42280.9 1.0 3359 3424 6784 DOHH2_400M_050219_2,6785 DOHH2_400M_050219_2,6785,ATEDPWKTNY True True ATEDPWKTNY 36.593372 612.780566394329 718903552.0 6784.0 ENSG00000139684|ENST00000378720|ESD 9.442646662394203 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6786 36.596 115.0 455260.0 25 0 64413.0 + 20259 LLDPSQKNLY 10 77 595.8243012326175 1189.6340495320349 2 595.8244506716728 MULTI CID FTMS 0 0 0 6784 430938.46875 0.4433840369758949 4 -0.1502227783203125 2 Unmodified _LLDPSQKNLY_ ENSG00000132010|ENST00000334213|ZNF20;ENSG00000196418|ENST00000543802|ZNF124;ENSG00000196646|ENST00000343979|ZNF136;ENSG00000198040|ENST00000539354|ZNF84;ENSG00000198551|ENST00000361113|ZNF627;ENSG00000223547|ENST00000439326|ZNF844;ENSG00000257446|ENST00000547628|ZNF878;ENSG00000257591|ENST00000439556|ZNF625;ENSG00000277462|ENST00000366503|ZNF670;ENST00000464860.1_1_19:12296590-12298813:+|nuORF;ENST00000476676.1_1_19:12296653-12296758:+|nuORF;ENST00000478942.5_1_19:12246557-12251057:-|nuORF;ENST00000480770.5_3_19:12241465-12247683:-|nuORF;ENST00000539098.5_1_12:133618053-133624816:+|nuORF;ENST00000543124.1_1_12:133624462-133624816:+|nuORF;nc|ENSG00000196418|Q15973-4|ZNF124;nc|ENSG00000196418|Q15973-5|ZNF124;nc|ENSG00000214189|Q6ZQV5-2|ZNF788P;nc|ENSG00000214189|Q6ZQV5|ZNF788P 66.45667989310934 0.0196491505995134 2 {I|L}{I|L}D[QT]PD{I|L} 8 5 55.425 0.0 0.0 4.659 0.0 0.0 0.0 291.13588887735153 291.13588887735153 39.8514532483668 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.3807196863200844 0.3252574989159953 {I|L}{I|L}D[QT]PD{I|L} 4.659 - 266 1 1.915 46494.5 1.0 3360 3424 6784 DOHH2_400M_050219_2,6786 DOHH2_400M_050219_2,6786,LLDPSQKNLY True True LLDPSQKNLY 36.595781 595.824450671673 22576678.5 6784.0 nc|ENSG00000196418|Q15973-4|ZNF124;;ENST00000478942.5_1_19:12246557-12251057:-|nuORF;;nc|ENSG00000214189|Q6ZQV5-2|ZNF788P;;ENSG00000196646|ENST00000343979|ZNF136;;ENSG00000223547|ENST00000439326|ZNF844;;ENST00000543124.1_1_12:133624462-133624816:+|nuORF;;nc|ENSG00000214189|Q6ZQV5|ZNF788P;;ENSG00000257591|ENST00000439556|ZNF625;;ENSG00000277462|ENST00000366503|ZNF670;;ENST00000464860.1_1_19:12296590-12298813:+|nuORF;;ENSG00000257446|ENST00000547628|ZNF878;;ENST00000480770.5_3_19:12241465-12247683:-|nuORF;;nc|ENSG00000196418|Q15973-5|ZNF124;;ENSG00000132010|ENST00000334213|ZNF20;;ENSG00000198551|ENST00000361113|ZNF627;;ENST00000476676.1_1_19:12296653-12296758:+|nuORF;;ENSG00000196418|ENST00000543802|ZNF124;;ENST00000539098.5_1_12:133618053-133624816:+|nuORF;;ENSG00000198040|ENST00000539354|ZNF84 7.868669350941976 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6787 36.603 389.0 403680.0 25 0 85473.0 + 760 AERDLYRDTW 10 134 442.2140319477845 1323.6202664435536 3 442.2141601443291 MULTI CID FTMS 0 0 0 6784 194306.8125 0.199671934995859 4 -0.1502227783203125 3 Unmodified _AERDLYRDTW_ ENSG00000242114|ENST00000266263|MTFP1;nc|ENSG00000242114|Q9UDX5-2|MTFP1 41.34703777101937 0.1433426498679313 2 {I|L}Y[RD]TW 6 4 34.188 0.0 0.0 2.5829 0.0 0.0 471.2072923695279 0.0 471.2072923695279 0.0 -2.204937904527199 -2.204937904527199 0.0 0 1.4559771852360797 0.0 0.3252574989159953 0.0 + {I|L}Y[RD]TW 2.5829 + + 335 1 1.915 126162.0 1.0 3361 3424 6784 DOHH2_400M_050219_2,6787 DOHH2_400M_050219_2,6787,AERDLYRDTW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6788 36.61 405.0 271540.0 25 0 23073.0 + 15991 ITDPDPDIRY 10 111 602.7961003620584 1203.577647790917 2 602.7963134646416 MULTI CID FTMS 0 0 0 6784 159460.859375 0.1261143369661068 6 -0.2997055053710937 4 Unmodified _ITDPDPDIRY_ ENSG00000198793|ENST00000361445|MTOR 43.9818466556824 0.1155196613165264 2 {I|L}TDPD[DP]{I|L}RY 10 0 + 73.677 0.0 0.0 6.1215 6.1215 82.262 0.0 0.0 0.0 54.98055982231925 11.249387366083 11.249387366083 4.771212547196626 0 0.7302046884880937 2.0 0.0 0.0 + + {I|L}TDPD[DP]{I|L}RY;{I|L}TDPC[HS]{I|L}RY;{I|L}TDPD[DP]Y[R{I|L}];{I|L}TDPC[HS]Y[R{I|L}];{I|L}TDPDY{[RE]|[WV]}[VP];{I|L}TDPDY[DP][R{I|L}];{I|L}TDPD[DP][HV][VP];{I|L}TDPC[HS][HV][VP];{I|L}T{[DS]|[MA]|[CV]|TT}AY[HS]D[VP];{I|L}TDPD[NS]{[CA]|SS}[R{I|L}] 6.1215;5.7251;4.998;4.6016;4.5001;4.4978;4.2388;3.8424;3.7104;3.6559 +;-;-;-;-;-;-;-;-;- + 889 + 1 1.915 86241.3 1.0 3362 3424 6784 DOHH2_400M_050219_2,6788 DOHH2_400M_050219_2,6788,ITDPDPDIRY True True ITDPDPDIRY 36.609981 602.796313464642 21971385.0 6784.0 ENSG00000198793|ENST00000361445|MTOR 7.616934458414714 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6789 36.615 271.0 251130.0 25 0 18299.0 + 22943 LSEPSSLQY 9 104 512.2521463773691 1022.489739821538 2 512.2515746951103 MULTI CID FTMS 0 0 0 6784 160128.109375 0.0842518009870357 5 -0.1876487731933593 5 Unmodified _LSEPSSLQY_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 34.10243960390752 0.1078313939113124 2 {I|L}A{[DS]|[MA]|[CV]|TT}QY 6 5 29.474 0.0 0.0 2.8826 0.0 0.0 327.1373971475131 0.0 327.1373971475131 0.0 19.38547520912806 0.0 0.0 0 0.5 0.0 0.7614393726401688 0.5 {I|L}A{[DS]|[MA]|[CV]|TT}QY 2.8826 - 272 + 1 1.915 55072.3 1.0 3363 3424 6784 DOHH2_400M_050219_2,6789 DOHH2_400M_050219_2,6789,LSEPSSLQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6790 36.624 496.0 291220.0 25 0 54834.0 + 31694 RRMEVYNEF 9 112 622.2979018985027 1242.5812508638053 2 622.2974120974541 MULTI CID FTMS 0 0 0 6784 108357.0703125 0.2699797014548848 -3 0.1171989440917968 6 Unmodified _RRMEVYNEF_ ENSG00000178105|ENST00000322536|DDX10;ENST00000417796.1_1_9:84702254-84702629:-|nuORF 27.628801355627647 0.1796483985696185 2 DQ{M(Oxidation (M))|F} 3 8 32.167 0.0 0.0 2.5887 0.0 0.0 834.4190330970052 0.0 834.4190330970052 0.0 8.711375162600703 0.0 0.0 0 0.5 0.0 0.5 0.3494850021680094 DQ{M(Oxidation (M))|F} 2.5887 - 241 1 1.915 109362.1 1.0 3364 3424 6784 DOHH2_400M_050219_2,6790 DOHH2_400M_050219_2,6790,RRMEVYNEF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6791 36.638 800.0 113830.0 25 0 8642.5 -1 0 97 881.9126736032672 1761.8107942733343 2 881.9135619997978 MULTI CID FTMS 0 0 0 6784 104364.7265625 0.0877829451858774 12 -0.9751052856445312 7 2 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQG[VG]D{M(Oxidation (M))|F}{I|L}Q 16 -1 + 98.395 0.0 0.0 5.5849 5.5849 78.184 0.0 0.0 0.0 7.659167939666318 15.56337391686148 7.659167939666318 3.0102999566398125 0 1.305462187404089 0.0 0.3494850021680094 1.4604093769761874 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQG[VG]D{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQAAAD{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ{[NV]|[RG]}D{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEAQG[VG]D{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[AG]G[VG]D{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAQG[VG]D{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PNN{I|L}EAQG[VG]D{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEAQAAAD{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAQAAAD{M(Oxidation (M))|F}{I|L}Q 5.5849;5.414;5.204;5.0732;5.0732;5.0732;5.0332;4.9568;4.9024;4.9024 -;-;-;-;-;-;-;-;-;- 4234 + 1 1.915 66975.1 0.5400000214576721 3365 3424 6784 DOHH2_400M_050219_2,6791 DOHH2_400M_050219_2,6791, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6792 36.645 421.0 207960.0 25 0 18581.0 45386 YTADGKEVLEY 11 138 644.308475954619 1286.602398976038 2 644.3068115115166 MULTI CID FTMS 0 0 0 6784 119627.234375 0.1036484296852222 9 -0.6480216979980469 8 Unmodified _YTADGKEVLEY_ ENSG00000196655|ENST00000533632|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENST00000531290.5_1_11:118889791-118894106:+|nuORF 23.80106514851385 0.5333463718001408 2 [YT]EE{[QN]|[E{I|L}]|[KN]}V{I|L}EY 10 4 + 33.905 0.0 0.0 2.6352 2.6352 67.712 0.0 0.0 0.0 2.2885593051641706 6.989700043360184 2.2885593051641706 2.2885593051641706 0 0.3807196863200844 2.0 0.3252574989159953 0.2742275032520141 [YT]EE{[QN]|[E{I|L}]|[KN]}V{I|L}EY;[YE]{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}VQNY;[YT]{[NV]|[RG]}{[{M(Oxidation (M))|F}H]|[RQ]}TENY;[YT]EE{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}ENY;[YE]{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}V{I|L}EY;[YT]{[NV]|[RG]}{[{M(Oxidation (M))|F}H]|[RQ]}TNEY;[YT]EE{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NEY;[YT]{[NV]|[RG]}{[{M(Oxidation (M))|F}H]|[RQ]}NTEY;[YE]{[ET]|[MV]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}ENY;{[QN]|[E{I|L}]|[KN]}EEV{I|L}TYEY 2.6352;2.4573;2.2175;2.1881;2.0865;1.8466;1.8173;1.7098;1.6394;1.3568 -;-;-;-;-;-;-;-;-;- 956 1 1.915 70684.2 1.0 3366 3424 6784 DOHH2_400M_050219_2,6792 DOHH2_400M_050219_2,6792,YTADGKEVLEY False True TEAERYLENY 36.645139 644.306811511517 411496.90625 6784.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 3.4861026604970298 2.0 False 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6794 36.651 108.0 395290.0 25 0 21829.0 + 38598 TTDPYLTNSY 10 89 587.7665685635532 1173.5185841939062 2 587.7670165896416 MULTI CID FTMS 0 0 0 6793 405349.125 0.4363917131419416 3 -0.0936660766601562 1 Unmodified _TTDPYLTNSY_ ENSG00000182022|ENST00000435907|CHST15;nc|ENSG00000182022|Q7LFX5-2|CHST15 52.268347100219714 0.0668375294751462 2 SY 2 8 23.856 0.0 0.0 2.0329 0.0 0.0 905.412762515975 0.0 905.412762515975 0.0 1.9855926684676284 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 + SY 2.0329 + + 287 + 1 1.922 37988.4 1.0 3367 3425 6793 DOHH2_400M_050219_2,6794 DOHH2_400M_050219_2,6794,TTDPYLTNSY True True TTDPYLTNSY 36.651314 587.767016589642 13732466.0 6793.0 ENSG00000182022|ENST00000435907|CHST15;;nc|ENSG00000182022|Q7LFX5-2|CHST15 7.0444685618082685 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6795 36.665 800.0 105580.0 25 0 4224.1 + 32876 SEIEDSTKQVF 11 141 641.8115066322325 1281.608460331265 2 641.8105346560478 MULTI CID FTMS 0 0 0 6793 54333.2109375 0.0839414718378463 6 -0.3594741821289062 2 Unmodified _SEIEDSTKQVF_ ENSG00000139618|ENST00000380152|BRCA2 40.23920728925047 0.2087110615831976 2 Y{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 10 18.276 0.0 0.0 1.426 0.0 0.0 806.4008320127087 0.0 806.4008320127087 0.0 -3.2678735278690034 -3.2678735278690034 0.0 0 0.5 0.0 0.0 0.0 Y{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.426 - 1129 + 1 1.922 69326.6 0.6000000238418579 3368 3425 6793 DOHH2_400M_050219_2,6795 DOHH2_400M_050219_2,6795,SEIEDSTKQVF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6796 36.669 196.0 293480.0 25 0 22845.0 + 13123 HEVPYTTSF 9 81 540.753332776134 1079.492112619068 2 540.7532836794853 MULTI CID FTMS 0 0 0 6793 239512.234375 0.3789261522321338 -4 0.1737556457519531 3 Unmodified _HEVPYTTSF_ ENSG00000119638|ENST00000238616|NEK9;ENST00000556170.5_1_14:75553702-75572727:-|nuORF;ENST00000557026.5_1_14:75551269-75572727:-|nuORF 64.23631603340823 0.0237365939569086 2 {[YC]|[HE]}VPYTTS{M(Oxidation (M))|F} 9 0 + 56.775 0.0 0.0 5.2594 5.2594 86.414 0.0 0.0 0.0 12.082887833543545 8.697114610913488 8.697114610913488 12.082887833543545 0 0.8935078169319297 0.0 1.674742501084005 0.0 + + {[YC]|[HE]}VPYTTS{M(Oxidation (M))|F};[{I|L}T]{M(Oxidation (M))|F}TYTTS{M(Oxidation (M))|F};{[YC]|[HE]}VT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TS{M(Oxidation (M))|F};[{I|L}T]{M(Oxidation (M))|F}TYTG{[YD]|[{M(Oxidation (M))|F}M]};{[YC]|[HE]}VT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{[YD]|[{M(Oxidation (M))|F}M]};[{I|L}T][HD]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TS{M(Oxidation (M))|F};{[CP]|[EA]}[PG][RD]TTS{M(Oxidation (M))|F};[{I|L}T][HD]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{[YD]|[{M(Oxidation (M))|F}M]} 5.2594;4.1401;3.5962;2.7134;2.1696;1.6015;0.91292;0.17479 +;-;-;-;-;-;-;- + 248 1 1.922 50405.6 1.0 3369 3425 6793 DOHH2_400M_050219_2,6796 DOHH2_400M_050219_2,6796,HEVPYTTSF True True HEVPYTTSF 36.668912 540.753283679485 7374760.0 6793.0 ENST00000557026.5_1_14:75551269-75572727:-|nuORF;;ENSG00000119638|ENST00000238616|NEK9;;ENST00000556170.5_1_14:75553702-75572727:-|nuORF 8.536162694295248 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6797 36.677 459.0 309900.0 25 0 32843.0 -1 0 120 909.0597768774452 2724.157501232535 3 909.3928100466728 MULTI CID FTMS 0 0 0 6793 167329.984375 0.1677425997185702 -4 0.1737556457519531 4 2 [YG]S{[NV]|[RG]}SQ[TP]YQ 11 -1 54.614 0.0 0.0 2.0048 0.0 0.0 0.0 1496.598494125771 1496.598494125771 1.4035699682584024 0.0 0.0 0.0 0 0.0 2.0 1.841129063296272 0.7742275032520141 [YG]S{[NV]|[RG]}SQ[TP]YQ 2.0048 - 12311 1 1.922 96002.2 1.0 3370 3425 6793 DOHH2_400M_050219_2,6797 DOHH2_400M_050219_2,6797, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6798 36.682 254.0 475730.0 25 0 38812.0 + 8136 EPLAKKIF 8 120 473.2916340000108 944.5687150668216 2 473.2922241091728 MULTI CID FTMS 0 0 0 6793 153752.484375 0.1883708132870336 -4 0.1737556457519531 5 Unmodified _EPLAKKIF_ ENSG00000218739|ENST00000402297|CEBPZOS;ENST00000470216.1_1_2:37426847-37428252:+|nuORF 42.09456458481378 0.1992492688217789 2 EP{I|L}AK{I|L}K{M(Oxidation (M))|F} 8 2 + 74.119 0.0 0.0 7.8468 7.8468 84.586 0.0 0.0 0.0 57.29818770663016 16.40978057358332 16.40978057358332 3.0102999566398125 0 0.3252574989159953 1.3010299956639813 0.0 0.0 EP{I|L}AK{I|L}K{M(Oxidation (M))|F};EP{I|L}AKK{I|L}{M(Oxidation (M))|F};EPRR{I|L}K{M(Oxidation (M))|F};EP{I|L}[K{I|L}]AK{M(Oxidation (M))|F};EP{I|L}AKK{M(Oxidation (M))|F}{I|L};EP{I|L}RRK{M(Oxidation (M))|F};EPRRK{I|L}{M(Oxidation (M))|F};[NP]KAK{I|L}K{M(Oxidation (M))|F};[NP]KAKK{I|L}{M(Oxidation (M))|F};EPRRK{M(Oxidation (M))|F}{I|L} 7.8468;7.5281;5.8205;5.8077;5.7226;5.5018;5.5018;5.4404;5.1217;3.6963 -;+;-;-;-;-;-;-;-;- + 666 + 1 1.922 96973.7 1.0 3371 3425 6793 DOHH2_400M_050219_2,6798 DOHH2_400M_050219_2,6798,EPLAKKIF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6799 36.696 800.0 185300.0 25 0 16106.0 + 29059 QELDSTDGAKVF 12 161 655.3170125488919 1308.6194721645836 2 655.3166992068291 MULTI CID FTMS 0 0 0 6793 141651.25 0.7069885863246299 -2 0.1007652282714843 6 Oxidation (M) _QEISSQTLEKM(Oxidation (M))_ nc|ENSG00000100883|P61011-2|SRP54;ENSG00000100883|ENST00000216774|SRP54 55.24861242081279 0.0885632729458983 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DSTDQKV{M(Oxidation (M))|F} 11 5 + 63.045 0.0 0.0 4.8176 4.8176 76.546 0.0 0.0 0.0 4.091959503804475 4.091959503804475 4.091959503804475 4.091959503804475 0 1.416386562212267 0.0 0.2742275032520141 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DSTDQKV{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}D[C(Carbamidomethyl (C))K]{I|L}EQ{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DSTD[AG]KV{M(Oxidation (M))|F};[AG]ESSDKV{I|L}EQ{M(Oxidation (M))|F};[AG]ESKVSD{I|L}EQ{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}D{[CT]|[{M(Oxidation (M))|F}G]}VQKV{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSDKV{I|L}EQ{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SKVSD{I|L}EQ{M(Oxidation (M))|F};[AG]TDSDKV{I|L}EQ{M(Oxidation (M))|F};[AG]ESS[WR]{I|L}EQ{M(Oxidation (M))|F} 4.8176;4.505;4.1201;4.0302;3.8853;3.6148;3.5471;3.4023;3.3269;3.2063 -;-;-;-;-;-;-;-;-;- 6609 + 1 1.922 115097.4 0.6899999976158142 3372 3425 6793 DOHH2_400M_050219_2,6799 DOHH2_400M_050219_2,6799,QEISSQTLEKM True False QELDSTDGAKVF 36.695628 655.316699206829 1386384.125 6793.0 nc|ENSG00000100883|P61011-2|SRP54;;ENSG00000100883|ENST00000216774|SRP54 9.469419479370115 2.0 False 12.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6801 36.7 41.0 1100200.0 25 0 159760.0 + 8438 ESLQPKRG 8 76 457.7562049534704 913.4978569737408 2 457.7562744021416 MULTI CID FTMS 0 0 0 6800 1019152.5 0.5431741151507379 3 -0.0806007385253906 1 Unmodified _ESLQPKRG_ REV__ENSG00000158163|ENST00000327532|DZIP1L 16.942295170755138 0.6606234159769251 2 RNVGNT{I|L} 7 -1 34.257 0.0 0.0 3.7501 0.0 0.0 141.0792408673844 0.0 141.0792408673844 0.0 9.806679035102164 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 RNVGNT{I|L} 3.7501 - 238 1 1.922 38231.2 1.0 3373 3426 6800 DOHH2_400M_050219_2,6801 DOHH2_400M_050219_2,6801,ESLQPKRG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6802 36.702 45.0 1279900.0 25 0 202170.0 + 45417 YTDFDGTRVY 10 50 618.7799248705649 1235.5452968079296 2 618.7802001833916 MULTI CID FTMS 0 0 0 6800 1133574.5 0.6867581986216817 3 -0.0806007385253906 2 Unmodified _YTDFDGTRVY_ ENSG00000102096|ENST00000376509|PIM2;ENSG00000137193|ENST00000373509|PIM1;ENSG00000198355|ENST00000360612|PIM3;nc|ENSG00000137193|P11309-2|PIM1 37.07464296494664 0.1884581770199685 2 YTD{M(Oxidation (M))|F}D 5 5 75.701 0.0 0.0 6.1269 0.0 0.0 0.0 591.2889083008504 591.2889083008504 68.7113751626007 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.8494850021680094 0.0 + YTD{M(Oxidation (M))|F}D 6.1269 + + 45 + 1 1.922 48437.0 1.0 3374 3426 6800 DOHH2_400M_050219_2,6802 DOHH2_400M_050219_2,6802,YTDFDGTRVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6803 36.706 245.0 471190.0 25 0 85750.0 + 13390 HLKLNRISF 9 145 376.56069400049023 1126.660252601671 3 376.5605956912041 MULTI CID FTMS 0 0 0 6800 104364.609375 0.8028796679689918 -3 0.1512565612792968 3 Unmodified _HLKLNRISF_ REV__ENST00000422060.2_1_7:5161504-5161795:-|nuORF 12.240655878213236 0.5053430591993562 2 E{M(Oxidation (M))|F} 2 -1 24.253 0.0 0.0 2.1526 0.0 0.0 832.5390652598065 0.0 832.5390652598065 0.0 11.15356566548286 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 E{M(Oxidation (M))|F} 2.1526 - 100 1 1.922 92319.3 1.0 3375 3426 6800 DOHH2_400M_050219_2,6803 DOHH2_400M_050219_2,6803,HLKLNRISF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6805 36.714 298.0 228560.0 25 0 22753.0 + 2048 APLPPHLPGA 10 93 485.2803608437773 968.5461687543548 2 485.2791931033134 MULTI CID FTMS 0 0 0 6804 134709.453125 0.5619231978778146 14 -1.2624015808105469 1 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 24.67388899826682 0.4143206957119831 2 [PA]{I|L}Y{I|L}P 6 5 37.229 0.0 0.0 3.8438 0.0 0.0 0.0 311.1329356823422 311.1329356823422 23.44212497064703 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [PA]{I|L}Y{I|L}P 3.8438 - 289 1 1.922 55658.5 1.0 3376 3427 6804 DOHH2_400M_050219_2,6805 DOHH2_400M_050219_2,6805,APLPPHLPGA False True APLPPHLPGA 36.714228 485.279193103313 2103601.0 6804.0 LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 5.215195020039876 2.0 True 10.0 False ERV PXD020620_cell_line DOHH2_400M_050219_2 6806 36.718 170.0 355620.0 25 0 37873.0 + 36494 TADVHGLYY 9 91 519.7486753998224 1037.4827978664448 2 519.7484619021416 MULTI CID FTMS 0 0 0 6804 186856.171875 0.4693351582211316 -2 0.06109619140625 2 Unmodified _TADVHGLYY_ ENST00000476493.5_1_1:33099602-33116090:-|nuORF 42.09456458481378 0.0639583784996157 2 [TA][DG]TA{I|L}GW{M(Oxidation (M))|F} 10 6 + 48.95 0.0 0.0 4.7182 4.7182 74.761 0.0 0.0 0.0 38.35439946897759 0.7699217471274977 0.7699217471274977 3.0102999566398125 0 0.6861818737241735 1.5228787452803376 0.3494850021680094 0.0 [TA][DG]TA{I|L}GW{M(Oxidation (M))|F};[TA][DG]{I|L}TAGW{M(Oxidation (M))|F};[TA][DG]T{I|L}AGW{M(Oxidation (M))|F};{[HG]|PP}{I|L}VDATYY;[TA][DG][HV]{I|L}YY;[TA][DG]{I|L}TQW{M(Oxidation (M))|F};{[HG]|PP}[DV]{I|L}ATYY;{[HG]|PP}{I|L}VWTYY;[TA][DG]{I|L}[HV]YY;[TA][DG]TP[WK]Y 4.7182;4.428;4.1379;4.0627;3.9335;3.7984;3.7554;3.7284;3.724;3.6778 -;-;-;-;-;-;-;-;-;- 435 + 1 1.922 52481.6 1.0 3377 3427 6804 DOHH2_400M_050219_2,6806 DOHH2_400M_050219_2,6806,TADVHGLYY True True TADVHGLYY 36.717555 519.748461902142 2444405.0 6804.0 ENST00000476493.5_1_1:33099602-33116090:-|nuORF 5.218039035797119 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6807 36.725 413.0 163990.0 25 0 11694.0 + 4797 DENSLEYKYY 10 105 662.2901702338705 1322.565787534541 2 662.2913696169853 MULTI CID FTMS 0 0 0 6804 98963.0546875 0.9797581819505132 -2 0.06109619140625 3 Unmodified _DENSLEYKYY_ ENSG00000064607|ENST00000452918|SUGP2;ENST00000598240.1_1_19:19105804-19136912:-|nuORF;nc|ENSG00000064607|Q8IX01-3|SUGP2;nc|ENSG00000064607|Q8IX01-4|SUGP2 53.31671820480216 0.0606844387689228 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NS{I|L}EYKYY 10 0 + 54.914 0.0 0.0 4.1521 4.1521 82.505 0.0 0.0 0.0 36.5030565586067 11.054266826574462 11.054266826574462 13.521825181113629 0 1.8539171939081167 0.0 0.0 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NS{I|L}EYKYY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WK]EYKYY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WQ]EYKYY 4.1521;3.1297;3.1297 +;-;- + 363 + 1 1.922 56393.6 1.0 3378 3427 6804 DOHH2_400M_050219_2,6807 DOHH2_400M_050219_2,6807,DENSLEYKYY True True DENSLEYKYY 36.724936 662.291369616985 666469.3125 6804.0 ENST00000598240.1_1_19:19105804-19136912:-|nuORF;;ENSG00000064607|ENST00000452918|SUGP2;;nc|ENSG00000064607|Q8IX01-4|SUGP2;;nc|ENSG00000064607|Q8IX01-3|SUGP2 8.668911298116049 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6808 36.739 800.0 147790.0 25 0 9749.2 43511 WWWWIWWQWW 10 110 874.9037639281709 1747.7929749231416 2 875.4012939333916 MULTI CID FTMS 0 0 0 6804 149430.046875 0.0629940842679985 19 -1.65106201171875 4 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.4583401331227399 0.7245164002484112 2 [NP]{I|L}NA[QP]QDAN{I|L}DP 14 13 85.487 0.0 0.0 4.8911 0.0 0.0 0.0 257.0625851465779 257.0625851465779 66.85927302166498 0.0 0.0 0.0 0 1.086696871556164 1.0 0.4247425010840047 0.75 [NP]{I|L}NA[QP]QDAN{I|L}DP 4.8911 - 1634 1 1.922 82546.0 0.6399999856948853 3379 3427 6804 DOHH2_400M_050219_2,6808 DOHH2_400M_050219_2,6808,WWWWIWWQWW False False False False splicing PXD020620_cell_line DOHH2_400M_050219_2 6810 36.745 177.0 358130.0 25 0 33518.0 + 8378 ESDSRQIFY 9 81 572.7664941130179 1143.5184352928356 2 572.7667724490166 MULTI CID FTMS 0 0 0 6809 185923.34375 0.5027742576205254 4 -0.3757781982421875 1 Unmodified _ESDSRQIFY_ ENSG00000145740|ENST00000396591|SLC30A5;ENST00000507354.5_1_5:68398890-68419336:+|nuORF;nc|ENSG00000145740|Q8TAD4-2|SLC30A5 53.832793166522166 0.0319663582346103 2 E{I|L}{M(Oxidation (M))|F}Y 4 5 39.641 0.0 0.0 3.4666 0.0 0.0 573.2466397951197 0.0 573.2466397951197 0.0 19.80835659879972 0.0 0.0 0 0.5 0.0 1.5 0.0 E{I|L}{M(Oxidation (M))|F}Y 3.4666 - 41 1 1.922 54315.9 1.0 3380 3428 6809 DOHH2_400M_050219_2,6810 DOHH2_400M_050219_2,6810,ESDSRQIFY True True ESDSRQIFY 36.744788 572.766772449017 3245028.5 6809.0 ENSG00000145740|ENST00000396591|SLC30A5;;nc|ENSG00000145740|Q8TAD4-2|SLC30A5;;ENST00000507354.5_1_5:68398890-68419336:+|nuORF 6.732280572255452 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6811 36.757 682.0 139840.0 25 0 10146.0 + 4006 DALRSGLTV 9 142 466.26416477409725 930.5137766149944 2 466.2643310427666 MULTI CID FTMS 0 0 0 6809 60256.8125 0.6102552915977616 1 -0.0374259948730468 2 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 26.268140514670165 0.1969607489560049 2 [{M(Oxidation (M))|F}V][WR]QPV 7 7 + 29.965 0.0 0.0 3.2203 3.2203 73.584 0.0 0.0 0.0 4.960310232820149 10.299632233774428 4.960310232820149 6.445479542755727 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V][WR]QPV;{[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;[{M(Oxidation (M))|F}V][WR][AG]PV;[{M(Oxidation (M))|F}V][WR]QVP;{[DA]|[EG]}[R{I|L}][SG]{I|L}TV;[{M(Oxidation (M))|F}V][WR][NP]{I|L};[{I|L}T]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[SA]|[TG]}[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;[{M(Oxidation (M))|F}V][WR]RAP;[VS]R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 3.2203;2.5276;2.2176;2.0605;2.0136;1.9281;1.8372;1.7375;1.5636;1.3403 -;-;-;-;+;-;-;-;-;- + 163 + 1 1.922 78121.8 1.0 3381 3428 6809 DOHH2_400M_050219_2,6811 DOHH2_400M_050219_2,6811,DALRSGLTV False True DALRSGLTV 36.756632 466.264331042767 899049.9375 6809.0 nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 3.606170813242594 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6812 36.762 286.0 334640.0 25 0 27011.0 + 43953 YGNVTSLGY 9 112 487.234946106028 972.455339278856 2 487.2350952029228 MULTI CID FTMS 0 0 0 6809 103550.2890625 0.1009294539322414 -2 0.0431747436523437 3 Unmodified _YGNVTSLGY_ nc|ENSG00000186448|O14709-2|ZNF197 21.74664581756881 0.2544899275067181 2 {[WT]|[RM]}KCC{I|L}GY 8 6 {[WT]|[RM]}KCC{I|L} + + 25.969 17.72 2.413 2.6705 2.6705 48.367 0.0 0.0 0.0 0.0 7.279615680828609 0.0 0.0 0 0.5 0.0 0.0 0.0 {[WT]|[RM]}KCC{I|L}GY 2.6705 - 164 + 1 1.922 77872.2 1.0 3382 3428 6809 DOHH2_400M_050219_2,6812 DOHH2_400M_050219_2,6812,YGNVTSLGY False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6813 36.772 585.0 184170.0 25 0 15729.0 + 15372 IPNERTMQL 9 135 551.28937431452 1100.56419569584 2 551.2897216677666 MULTI CID FTMS 0 0 0 6809 96630.75 0.4513755698605913 -2 0.0431747436523437 4 Unmodified _IPNERTMQL_ ENSG00000223501|ENST00000445902|VPS52;ENST00000471309.1_1_6:33231312-33232261:-|nuORF;nc|ENSG00000223501|Q8N1B4-2|VPS52 45.69961567697781 0.0497987121815769 2 {I|L}PNEN 5 5 59.469 0.0 0.0 5.4035 0.0 0.0 0.0 530.2606295221311 530.2606295221311 40.943189564175896 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.7742275032520141 {I|L}PNEN 5.4035 - 818 + 1 1.922 87792.8 1.0 3383 3428 6809 DOHH2_400M_050219_2,6813 DOHH2_400M_050219_2,6813,IPNERTMQL True True IPNERTMQL 36.772128 551.289721667767 1878970.25 6809.0 nc|ENSG00000223501|Q8N1B4-2|VPS52;;ENSG00000223501|ENST00000445902|VPS52;;ENST00000471309.1_1_6:33231312-33232261:-|nuORF 5.498958905537923 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6814 36.776 218.0 355020.0 25 0 22555.0 + 465 AEFRIYKDY 9 111 402.20443651332135 1203.591480140164 3 402.2027160525322 MULTI CID FTMS 0 0 0 6809 121392.828125 0.7029733904653601 -1 0.0325698852539062 5 Unmodified _AEFRIYKDY_ ENSG00000101144|ENST00000395863|BMP7 19.256988751693697 0.3154191944385105 2 AEY 3 6 42.809 0.0 0.0 3.5568 0.0 0.0 0.0 837.4253023736936 837.4253023736936 24.607704751370875 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 AEY 3.5568 - 145 + 1 1.922 65339.1 1.0 3384 3428 6809 DOHH2_400M_050219_2,6814 DOHH2_400M_050219_2,6814,AEFRIYKDY False True AEFRIYKDY 36.776236 402.202716052532 762454.625 6809.0 ENSG00000101144|ENST00000395863|BMP7 1.3798221151034038 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6816 36.781 91.0 603490.0 25 0 51547.0 + 32882 SEIENVHGF 9 94 516.2429980274625 1030.4714431217249 2 516.2432128787041 MULTI CID FTMS 0 0 0 6815 433161.1875 0.4153325199169164 4 -0.4603729248046875 1 Unmodified _SEIENVHGF_ ENSG00000075711|ENST00000667157|DLG1;ENST00000471733.5_1_3:196807912-197024075:-|nuORF;ENST00000485409.5_1_3:196921289-197023334:-|nuORF;nc|ENSG00000075711|Q12959-2|DLG1;nc|ENSG00000075711|Q12959-3|DLG1;nc|ENSG00000075711|Q12959-5|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959|DLG1 25.399314129420983 0.2080152500878129 2 {NN|[MP]|[D{I|L}]|[EV]}MVGGE{I|L} 8 7 47.82 0.0 0.0 4.6406 0.0 0.0 0.0 213.05216171425425 213.05216171425425 34.30810803881059 0.0 0.0 0.0 0 0.4247425010840047 0.958607314841775 0.6989700043360187 0.0 {NN|[MP]|[D{I|L}]|[EV]}MVGGE{I|L} 4.6406 - 329 1 1.922 44661.1 1.0 3385 3429 6815 DOHH2_400M_050219_2,6816 DOHH2_400M_050219_2,6816,SEIENVHGF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6817 36.784 165.0 369250.0 25 0 61713.0 + 16257 IVSAQNLLK 9 76 493.3056601287906 984.5967673243812 2 493.3057128787041 MULTI CID FTMS 0 0 0 6815 283248.625 0.3364241149857479 5 -0.5706443786621094 2 Unmodified _IVSAQNLLK_ L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;nc|ENSG999|O00370|L1_ORF2 21.53697664764585 0.2571576504437394 2 {I|L}VSAQN{I|L}{I|L}K 9 0 + 56.609 0.0 0.0 5.7495 5.7495 81.089 0.0 0.0 0.0 34.28456906244314 1.928571858695136 1.928571858695136 4.771664843060179 0 0.4247425010840047 2.0 0.0 0.1549471895720985 + + {I|L}VSAQN{I|L}{I|L}K;{I|L}VSAQN[K{I|L}]{I|L};{I|L}VSAQGG{I|L}{I|L}K;{I|L}VSA[AG]N{I|L}{I|L}K;{I|L}VSAQGG[K{I|L}]{I|L};{I|L}VSA[AG]N[K{I|L}]{I|L} 5.7495;5.2648;4.8142;4.8142;4.3296;4.3296 +;-;-;-;-;- + 88 + 1 1.922 52527.0 1.0 3386 3429 6815 DOHH2_400M_050219_2,6817 DOHH2_400M_050219_2,6817,IVSAQNLLK False True False False ERV PXD020620_cell_line DOHH2_400M_050219_2 6818 36.787 111.0 569510.0 25 0 99234.0 + 15999 ITDSAGHILY 10 99 545.2823428087136 1088.550132684227 2 545.2828246951103 MULTI CID FTMS 0 0 0 6815 375693.40625 0.2179803313829157 -1 0.0374259948730468 3 Unmodified _ITDSAGHILY_ ENSG00000170348|ENST00000303575|TMED10 49.52724829834842 0.0829255630816734 2 {I|L}TD{[QS]|[NT]}H{I|L}{I|L}Y 9 2 + 56.493 0.0 0.0 5.1898 5.1898 75.547 0.0 0.0 0.0 40.295540574256776 6.739474173071613 6.739474173071613 2.174165578762484 0 1.3182503180159344 2.0 0.0 0.0 {I|L}TD{[QS]|[NT]}H{I|L}{I|L}Y;{I|L}TD[{I|L}T][HN]{I|L}Y;{I|L}TD{[QS]|[NT]}H{I|L}Y{I|L};{I|L}TD[{I|L}T][HN]Y{I|L};[H{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HK]D[VP];[VP][WY][{I|L}T]D[VP] 5.1898;4.9901;4.5477;4.3479;0.79685;0.18748 -;-;-;-;-;- 498 + 1 1.922 53971.4 1.0 3387 3429 6815 DOHH2_400M_050219_2,6818 DOHH2_400M_050219_2,6818,ITDSAGHILY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6819 36.792 300.0 477670.0 25 0 24386.0 + 592 AEITGEIQQY 10 147 576.2811217311034 1150.5476905290068 2 576.2824584841728 MULTI CID FTMS 0 0 0 6815 286509.9375 0.5100860907329785 -1 0.0374259948730468 4 Unmodified _AEITGEIQQY_ ENSG00000100485|ENST00000216373|SOS2;ENSG00000115904|ENST00000402219|SOS1;nc|ENSG00000100485|Q07890-2|SOS2 60.07390631473393 0.0363923079357811 2 {[CP]|[EA]}S{I|L}AEQQ{I|L}Y 10 5 + 48.341 0.0 0.0 4.2016 4.2016 70.066 0.0 0.0 0.0 0.92070179452611 16.532125137753436 0.92070179452611 0.92070179452611 0 0.0 0.0 0.8778623208748889 0.0 {[CP]|[EA]}S{I|L}AEQQ{I|L}Y;{[QN]|[E{I|L}]|[KN]}ASAEQQ{I|L}Y;{[CP]|[EA]}SAE{I|L}QQ{I|L}Y;{[DA]|[EG]}T{I|L}AEQQ{I|L}Y;[TA]D{I|L}AEQQ{I|L}Y;{[CP]|[EA]}{I|L}SAEQQ{I|L}Y;{[QN]|[E{I|L}]|[KN]}GTAEQQ{I|L}Y;{[DA]|[EG]}TAE{I|L}QQ{I|L}Y;[TA]DAE{I|L}QQ{I|L}Y;{[CP]|[EA]}VTAEQQ{I|L}Y 4.2016;4.1216;4.1149;4.064;4.0141;3.9904;3.9869;3.9773;3.9275;3.8557 -;-;-;-;-;-;-;-;-;- 6097 1 1.922 111865.0 1.0 3388 3429 6815 DOHH2_400M_050219_2,6819 DOHH2_400M_050219_2,6819,AEITGEIQQY True True AEITGEIQQY 36.792109 576.282458484173 3329774.25 6815.0 nc|ENSG00000100485|Q07890-2|SOS2;;ENSG00000115904|ENST00000402219|SOS1;;ENSG00000100485|ENST00000216373|SOS2 4.817808787027995 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6820 36.795 166.0 449100.0 25 0 46651.0 + 32745 SEDGAIHVI 9 89 470.7401459692072 939.4657390052143 2 470.7406799197197 MULTI CID FTMS 0 0 0 6815 200330.671875 0.8508336550767798 -1 0.0374259948730468 5 Unmodified _SEDGAIHVI_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 23.1484247019978 0.2366544122328345 2 {[ES]|[DT]|[{I|L}C]}DQ{I|L}[HV]{I|L} 8 2 + 17.801 0.0 0.0 1.8948 1.8948 76.225 0.0 0.0 0.0 1.18993674511551 0.6348625752110664 0.6348625752110664 9.262137858390815 0 0.75 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}DQ{I|L}[HV]{I|L};{[ES]|[DT]|[{I|L}C]}D[AG]{I|L}[HV]{I|L} 1.8948;0.90887 -;+ + 143 + 1 1.922 63669.5 1.0 3389 3429 6815 DOHH2_400M_050219_2,6820 DOHH2_400M_050219_2,6820,SEDGAIHVI False True SEDGAIHVI 36.795361 470.74067991972 1557475.375 6815.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 5.262480735778809 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6821 36.801 298.0 408050.0 25 0 36932.0 + 4271 DAQHLIMT 8 123 464.7315390040196 927.4485250748392 2 464.7336303591728 MULTI CID FTMS 0 0 0 6815 201158.828125 0.0319108945620051 -2 0.0699958801269531 6 Unmodified _DAQHLIMT_ REV__ENST00000482160.5_1_X:109931866-110002981:-|nuORF 25.399314129420983 0.5099049743284904 2 {[DA]|[EG]}HGA{I|L}{I|L}TM 9 -1 + 50.529 0.0 0.0 5.4482 5.4482 78.188 0.0 0.0 0.0 17.65916793966631 8.697114610913488 8.697114610913488 3.4678748622465605 0 0.8935078169319297 1.2218487496163564 0.3054621874040891 0.0 {[DA]|[EG]}HGA{I|L}{I|L}TM;{[DA]|[EG]}HQ{I|L}{I|L}TM;{[DA]|[EG]}HG{I|L}A{I|L}TM;{[DA]|[EG]}H{I|L}Q{I|L}TM;{[DA]|[EG]}H{I|L}GA{I|L}TM;[HD]AGA{I|L}{I|L}TM;[HD]QA{I|L}{I|L}TM;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[WK]TM;{[DA]|[EG]}HG{I|L}{I|L}ATM;[HD]AQ{I|L}{I|L}TM 5.4482;5.0743;4.4193;3.9107;3.5803;3.5442;3.3601;3.2921;3.2509;3.1702 -;-;-;-;-;-;-;-;-;- 717 1 1.922 98007.8 1.0 3390 3429 6815 DOHH2_400M_050219_2,6821 DOHH2_400M_050219_2,6821,DAQHLIMT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6822 36.805 243.0 232880.0 25 0 42021.0 + 45283 YSDKYGLGY 9 96 533.2481922105937 1064.4818314879874 2 533.2474853396416 MULTI CID FTMS 0 0 0 6815 167553.640625 0.3606654555505427 5 -0.5706443786621094 7 Unmodified _YSDKYGLGY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 32.78568957990786 0.1150597335874693 2 YSD 3 6 42.224 0.0 0.0 3.9666 0.0 0.0 0.0 696.3310030572874 696.3310030572874 23.015384402724592 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + YSD 3.9666 + + 203 + 1 1.922 47294.2 1.0 3391 3429 6815 DOHH2_400M_050219_2,6822 DOHH2_400M_050219_2,6822,YSDKYGLGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6823 36.811 319.0 299920.0 25 0 27171.0 + 30086 NLDIERPTY 9 104 560.786176743469 1119.557800553738 2 560.7847167849541 MULTI CID FTMS 0 0 0 6815 154759.40625 0.7985584573923523 -1 0.0374259948730468 8 Unmodified _QVDVFREDL_ ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000243910|ENST00000490341|TUBA4B;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167553|ENST00000301072|TUBA1C;nc|ENSG00000183785|Q9NY65-2|TUBA8;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;nc|ENSG00000127824|P68366-2|TUBA4A 47.74868867922204 0.0453060283459952 2 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}ER 6 5 62.312 0.0 0.0 5.5658 0.0 0.0 0.0 376.1513765924438 376.1513765924438 33.87390588723424 0.0 0.0 0.0 0 1.1861818737241734 2.0 0.3807196863200844 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}ER 5.5658 - 972 + 1 1.922 74501.1 1.0 3392 3429 6815 DOHH2_400M_050219_2,6823 DOHH2_400M_050219_2,6823,QVDVFREDL True False NLDIERPTY 36.811167 560.784716784954 1305366.875 6815.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000127824|ENST00000248437|TUBA4A;;ENSG00000243910|ENST00000490341|TUBA4B;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000152086|ENST00000312988|TUBA3E;;ENSG00000167553|ENST00000301072|TUBA1C;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;ENSG00000167552|ENST00000301071|TUBA1A;;ENSG00000075886|ENST00000321253|TUBA3D;;ENSG00000198033|ENST00000400113|TUBA3C;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000198033|P0DPH7-2|TUBA3C;;nc|ENSG00000127824|P68366-2|TUBA4A 5.166813850402832 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6824 36.825 800.0 111480.0 25 0 8279.8 + -1 YLEHGEYEGNLY 12 116 743.8273200472632 1485.6400871613264 2 744.3293334841728 MULTI CID FTMS 0 0 0 6815 112529.8671875 0.9904409992052444 -1 0.0374259948730468 9 Carbamidomethyl (C) _WPC(Carbamidomethyl (C))EYKQCPLY_ nc|ENSG00000108852|Q14168-6|MPP2;nc|ENSG00000108852|Q14168-3|MPP2;ENSG00000108852|ENST00000269095|MPP2;nc|ENSG00000108852|Q14168-2|MPP2;nc|ENSG00000108852|Q14168-4|MPP2;ENSG00000105926|ENST00000222644|PALS2;nc|ENSG00000108852|Q14168|MPP2;nc|ENSG00000108852|Q14168-5|MPP2 20.41453444215458 0.6105011870913812 2 [Y{I|L}][WH]EYEGN{I|L}Y 11 -1 + 70.279 0.0 0.0 4.7305 4.7305 72.776 0.0 0.0 0.0 1.461280356782396 10.835460514500753 1.461280356782396 1.461280356782396 0 0.5 1.6989700043360187 0.3054621874040891 0.3252574989159953 [Y{I|L}][WH]EYEGN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]WYEGN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]GEYEGN{I|L}Y;[Y{I|L}][WH]EEYGN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]WEYGN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]GEEYGN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}WWEYEGN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]GEYWN{I|L}Y;[NG]E[WE]{I|L}YEGN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]WYEGGG{I|L}Y 4.7305;4.6322;4.6067;4.4094;4.311;4.2856;4.1617;4.1617;4.1191;4.0177 -;-;-;-;-;-;-;-;-;- 2508 1 1.922 67200.0 0.5899999737739563 3393 3429 6815 DOHH2_400M_050219_2,6824 DOHH2_400M_050219_2,6824,WPCEYKQCPLY False False YLEHGEYEGNLY 36.825017 743.8283 1220123.75 6815.0 nc|ENSG00000108852|Q14168-6|MPP2;;nc|ENSG00000108852|Q14168-3|MPP2;;ENSG00000108852|ENST00000269095|MPP2;;nc|ENSG00000108852|Q14168-2|MPP2;;nc|ENSG00000108852|Q14168-4|MPP2;;ENSG00000105926|ENST00000222644|PALS2;;nc|ENSG00000108852|Q14168|MPP2;;nc|ENSG00000108852|Q14168-5|MPP2 7.582384586334228 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6825 36.839 800.0 133020.0 25 0 13840.0 + 28460 PTEPYLSSQNY 11 146 649.7983815469444 1297.5822101606886 2 649.7985107302666 MULTI CID FTMS 0 0 0 6815 97568.8046875 1.0 0 0.0 10 Unmodified _PTEPYLSSQNY_ ENSG00000174231|ENST00000304992|PRPF8 47.74868867922204 0.1300977870992118 2 [TP]E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SG 8 4 35.85 0.0 0.0 2.7628 0.0 0.0 0.0 450.1506665418012 450.1506665418012 5.056255099519429 0.0 0.0 0.0 0 0.0 0.7958800173440752 1.394599018282542 0.0 [TP]E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SG 2.7628 - 1095 1 1.922 83694.7 0.5799999833106995 3394 3429 6815 DOHH2_400M_050219_2,6825 DOHH2_400M_050219_2,6825,PTEPYLSSQNY False True PTEPYLSSQNY 36.838848 649.798510730267 692425.4375 6815.0 ENSG00000174231|ENST00000304992|PRPF8 6.636954307556152 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6826 36.849 562.0 285230.0 25 0 23916.0 + 22610 LPYIKQEV 8 163 495.2868510389953 988.5591491447906 2 495.2855102419853 MULTI CID FTMS 0 0 0 6815 92113.2421875 0.0689222299477349 -4 0.1310920715332031 11 Unmodified _LPYIKQEV_ ENSG00000047315|ENST00000314595|POLR2B 41.8396318013385 0.2035142800366642 2 {I|L}PY{I|L}K[DG]A{I|L} 9 4 + 61.596 0.0 0.0 6.2308 6.2308 86.136 0.0 0.0 0.0 44.94009708316895 13.147124887093824 13.147124887093824 8.284634594678266 0 0.9291746928241128 1.5228787452803376 0.3252574989159953 0.0 {I|L}PY{I|L}K[DG]A{I|L};{I|L}PY[KA][DV]A{I|L};{I|L}PY[KA]TPS{I|L};{I|L}PY[KA]TPTV;{I|L}V{M(Oxidation (M))|F}{[NV]|[RG]}[DV]A{I|L};{I|L}V{M(Oxidation (M))|F}{[NV]|[RG]}WV{I|L};{I|L}VM[KT][DV]A{I|L};{I|L}V{M(Oxidation (M))|F}{[NV]|[RG]}TPS{I|L};{I|L}V{M(Oxidation (M))|F}{[NV]|[RG]}W{I|L}V;{I|L}V{M(Oxidation (M))|F}{[NV]|[RG]}TPTV 6.2308;5.3928;4.2605;3.7315;3.5629;2.7999;2.7882;2.4306;2.2709;1.9016 -;-;-;-;-;-;-;-;-;- 1490 + 1 1.922 127560.1 1.0 3395 3429 6815 DOHH2_400M_050219_2,6826 DOHH2_400M_050219_2,6826,LPYIKQEV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6827 36.855 322.0 360390.0 25 0 25293.0 38972 TVPSGRPR 8 131 435.2510543401133 868.4875557470267 2 435.2506896853447 MULTI CID FTMS 0 0 0 6815 149228.46875 0.2471067623153353 -20 1.5176544189453125 12 Unmodified _TVPSGRPR_ ENST00000540643.5_2_22:32002357-32009472:+|nuORF 2.577480529830294 0.808687252328423 2 {I|L} 1 8 10.713 0.0 0.0 1.2336 0.0 0.0 737.3926441032752 0.0 737.3926441032752 0.0 8.723637474483468 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2336 - 30 + 1 1.922 94607.7 1.0 3396 3429 6815 DOHH2_400M_050219_2,6827 DOHH2_400M_050219_2,6827,TVPSGRPR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6828 36.861 246.0 368420.0 25 0 68977.0 -1 ELIPAGPG 8 121 398.2163024212387 0 398.2158386111259 PEAK CID FTMS 0 0 0 6815 105108.859375 1.0 0 0.0 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ELIPAGPG_ ENST00000396908.8_2_19:36255765-36256006:+|nuORF 5.760428011301431 0.5786759180849727 2 A 1 -1 7.7423 0.0 0.0 0.97458 0.0 0.0 397.1934337970309 323.1702669733032 720.363700770334 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 A 0.97458 + + 5 + 1 1.922 76245.6 1.0 3397 3429 6815 DOHH2_400M_050219_2,6828 DOHH2_400M_050219_2,6828,ELIPAGPG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6829 36.874 800.0 133290.0 25 0 9388.6 + 7745 ELEKKLVAI 9 165 521.8283369630916 1041.642120992983 2 521.8293334841728 MULTI CID FTMS 0 0 0 6815 98154.3515625 0.2868162641938444 6 -0.6894798278808594 14 Unmodified _ELEKKLVAI_ ENSG00000155561|ENST00000285968|NUP205 36.12702656103203 0.0967173616627612 2 A{I|L} 2 7 20.507 0.0 0.0 1.9687 0.0 0.0 839.5100847154425 0.0 839.5100847154425 0.0 -5.540775313925828 -5.540775313925828 0.0 0 0.6694451763165201 0.0 0.0 0.0 + A{I|L} 1.9687 + + 555 + 1 1.922 85239.9 0.4699999988079071 3398 3429 6815 DOHH2_400M_050219_2,6829 DOHH2_400M_050219_2,6829,ELEKKLVAI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6830 36.888 800.0 143260.0 25 0 11751.0 23479 LTHQISKDYG 10 174 581.2993795749608 1160.5842062167214 2 581.2986328005791 MULTI CID FTMS 0 0 0 6815 88719.4296875 1.0 0 0.0 15 Unmodified _LTHQISKDYG_ ENSG00000123131|ENST00000379341|PRDX4 21.53697664764585 0.484802182336468 2 {[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}[DP]Q{I|L}GY 10 8 + 39.543 0.0 0.0 3.4072 3.4072 71.599 0.0 0.0 0.0 3.979400086720375 5.184465535402296 3.979400086720375 3.979400086720375 0 0.8182503180159344 1.0969100130080565 0.7742275032520141 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}[DP]Q{I|L}GY;{[CP]|[EA]}R{I|L}[DP]Q{I|L}GY;[{I|L}T][HT]K[DN]{I|L}GY;[HT]{I|L}[DN]K[{I|L}T]GY;[{I|L}T][HT][QT]Q{I|L}GY;[HT]{I|L}Q[QT][{I|L}T]GY;[KP]M{I|L}[DP]Q{I|L}GY;[HT]{I|L}Q{[MG]|[TS]}[RV]GY;[HT]{I|L}Q{[MG]|[TS]}RRY;{[CP]|[EA]}R{I|L}[DP][AG]{I|L}GY 3.4072;3.0643;3.0575;2.9604;2.8015;2.7045;2.6973;2.621;2.4889;2.2746 -;-;-;-;-;-;-;-;-;- 712 1 1.922 86037.6 0.4699999988079071 3399 3429 6815 DOHH2_400M_050219_2,6830 DOHH2_400M_050219_2,6830,LTHQISKDYG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6832 36.894 82.0 648990.0 25 0 82883.0 + 6291 DVDIRKDLY 9 62 568.8008399055332 1135.5871268778662 2 568.8011352419853 MULTI CID FTMS 0 0 0 6831 483407.6875 0.2304245065483325 3 -0.3483161926269531 1 Unmodified _DVDIRKDLY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP 37.07464296494664 0.0915153923251136 2 [DV]D{I|L} 4 5 40.49 0.0 0.0 3.5655 0.0 0.0 0.0 690.3581637018186 690.3581637018186 11.458194150502049 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 + [DV]D{I|L} 3.5655 + + 56 + 1 1.934 43930.9 1.0 3400 3430 6831 DOHH2_400M_050219_2,6832 DOHH2_400M_050219_2,6832,DVDIRKDLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6833 36.896 72.0 674550.0 25 0 40846.0 + 2691 ATEDPWKTNY 10 79 612.7801090649566 1223.5456651967131 2 612.7797119021416 MULTI CID FTMS 0 0 0 6831 701787.75 0.0235245006688409 12 -1.203754425048828 2 Unmodified _ATEDPWKTNY_ ENSG00000139684|ENST00000378720|ESD 51.41523569358685 0.0718446036348414 2 [WP]KD[PS]PD 8 8 35.979 0.0 0.0 2.9405 0.0 0.0 0.0 298.1078709266333 298.1078709266333 10.51615737469504 0.0 0.0 0.0 0 0.4247425010840047 1.154901959985743 0.0 0.3807196863200844 [WP]KD[PS]PD 2.9405 - 424 1 1.934 41690.5 1.0 3401 3430 6831 DOHH2_400M_050219_2,6833 DOHH2_400M_050219_2,6833,ATEDPWKTNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6834 36.897 66.0 1027900.0 25 0 185760.0 + 37748 TLRERISAF 9 72 364.8770755385624 1091.6093972158872 3 364.8770324587822 MULTI CID FTMS 0 0 0 6831 600074.0 1.0 0 0.0 3 Unmodified _TLRERISAF_ ENSG00000184661|ENST00000330560|CDCA2 10.823927491677226 0.5436922275383211 2 A{M(Oxidation (M))|F} 2 7 20.701 0.0 0.0 1.8964 0.0 0.0 855.4929888414064 0.0 855.4929888414064 0.0 13.711375162600705 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + A{M(Oxidation (M))|F} 1.8964 + + 8 1 1.934 62109.1 1.0 3402 3430 6831 DOHH2_400M_050219_2,6834 DOHH2_400M_050219_2,6834,TLRERISAF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6835 36.9 132.0 559090.0 25 0 56112.0 + 7588 EILFIGLAI 9 105 494.8057468444142 987.5969407556285 2 494.8060180544853 MULTI CID FTMS 0 0 0 6831 329497.625 0.9149583315218868 -1 0.1120567321777343 4 Unmodified _EILFIGLAI_ REV__ENSG00000241973|ENST00000255882|PI4KA;REV__ENST00000485963.5_1_22:21152870-21213097:-|nuORF 23.1484247019978 0.2366544122328345 2 [KT]{I|L}TK[DV]A{I|L} 9 -1 + 24.939 0.0 0.0 2.5252 2.5252 80.377 0.0 0.0 0.0 2.7790619681684383 13.96977168525439 2.7790619681684383 24.938871815334952 0 0.3054621874040891 0.0 0.0 0.0 [KT]{I|L}TK[DV]A{I|L} 2.5252 - 585 + 1 1.934 62632.4 1.0 3403 3430 6831 DOHH2_400M_050219_2,6835 DOHH2_400M_050219_2,6835,EILFIGLAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6836 36.903 166.0 498730.0 25 0 46963.0 + 4753 DEIERKFDKW 10 94 455.8981275185981 1364.6725531559944 3 455.8980895876884 MULTI CID FTMS 0 0 0 6831 270695.28125 0.1173137462839074 -1 0.1120567321777343 5 Unmodified _DEIERKFDKW_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 36.95490438235368 0.1897225894910353 2 DE{I|L}ER{[QV]|[N{I|L}]|[RA]|[KV]}YKW 10 2 + 76.38 0.0 0.0 5.597 5.597 83.417 0.0 0.0 0.0 44.42471268044436 3.5834938564822494 3.5834938564822494 7.786596949921218 0 1.1549471895720984 2.0 0.9247425010840048 0.0 DE{I|L}ER{[QV]|[N{I|L}]|[RA]|[KV]}YKW;DE{I|L}ER{[QV]|[N{I|L}]|[RA]|[KV]}YWK;DE{I|L}E[VG]{[QV]|[N{I|L}]|[RA]|[KV]}YKW;D{M(Oxidation (M))|F}WK{I|L}E[DV]KW;DE{I|L}E[VG]{[QV]|[N{I|L}]|[RA]|[KV]}YWK;DE{I|L}ERK{[CP]|[EA]}[{M(Oxidation (M))|F}T]K;DEW[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}YKW;D{M(Oxidation (M))|F}WK{I|L}E[DV]WK;D{M(Oxidation (M))|F}W{I|L}KE[DV]KW;W{[{M(Oxidation (M))|F}D]|MM}K{I|L}E[DV]KW 5.597;5.0264;4.9254;4.6268;4.3548;4.2258;4.1323;4.0563;4.0211;3.8272 -;-;-;-;-;-;-;-;-;- 903 + 1 1.934 72353.2 1.0 3404 3430 6831 DOHH2_400M_050219_2,6836 DOHH2_400M_050219_2,6836,DEIERKFDKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6837 36.906 162.0 314950.0 25 0 16422.0 + 7412 GEANGVWKY 9 88 512.2521463773691 1022.489739821538 2 512.2482787966728 MULTI CID FTMS 0 0 0 6831 248841.15625 0.130928390122066 11 -1.0803489685058594 6 Unmodified _EGLDPKTTY_ ENST00000495312.1_1_2:27255799-27258254:+|nuORF;ENSG00000119777|ENST00000238788|TMEM214;nc|ENSG00000119777|Q6NUQ4-2|TMEM214 25.399314129420983 0.2080152500878129 2 {[DA]|[EG]}ANRWKY 8 6 + 59.385 0.0 0.0 5.8079 5.8079 87.63 0.0 0.0 0.0 45.9568378181978 12.914930551903224 12.914930551903224 9.262137858390815 0 0.6989700043360187 1.5228787452803376 0.0 0.0 {[DA]|[EG]}ANRWKY;{[DA]|[EG]}AN[VG]WKY;{[DA]|[EG]}AGGRWKY;{[DA]|[EG]}AGG[VG]WKY 5.8079;4.9021;4.9021;4.0015 -;-;-;- 75 + 1 1.934 43030.9 1.0 3405 3430 6831 DOHH2_400M_050219_2,6837 DOHH2_400M_050219_2,6837,EGLDPKTTY False False GEANGVWKY 36.906433 512.248278796673 2002030.0 6831.0 ENST00000495312.1_1_2:27255799-27258254:+|nuORF;;ENSG00000119777|ENST00000238788|TMEM214;;nc|ENSG00000119777|Q6NUQ4-2|TMEM214 8.151803811391195 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6838 36.91 205.0 367620.0 25 0 24408.0 + 31497 RQETILVDY 9 104 379.5361995909293 1135.586769372988 3 379.5361816287041 MULTI CID FTMS 0 0 0 6831 199940.046875 0.2094630487400359 2 -0.2262954711914062 7 Unmodified _RQETILVDY_ ENSG00000166405|ENST00000309737|RIC3;ENST00000524799.5_1_11:8132247-8159930:-|nuORF;ENST00000530060.5_1_11:8132247-8149890:-|nuORF;nc|ENSG00000166405|Q7Z5B4-3|RIC3;nc|ENSG00000166405|Q7Z5B4-5|RIC3;nc|ENSG00000166405|Q7Z5B4-6|RIC3 7.101721422024254 0.6667666702315642 2 [DV]D 3 7 29.947 0.0 0.0 2.6372 0.0 0.0 0.0 803.4423703217888 803.4423703217888 15.34318117920506 0.0 0.0 0.0 0 0.25 2.0 0.0 0.0 [DV]D 2.6372 - 129 + 1 1.934 65884.6 1.0 3406 3430 6831 DOHH2_400M_050219_2,6838 DOHH2_400M_050219_2,6838,RQETILVDY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6839 36.915 227.0 343970.0 25 0 50970.0 + 15974 ITDHGSLIY 9 87 509.76415932711177 0 509.7640869021416 PEAK CID FTMS 0 0 0 6831 198184.578125 0.3470138150961442 -1 0.1120567321777343 8 Unmodified _ITDHGSLIY_ ENSG00000132109|ENST00000254436|TRIM21;nc|ENSG00000132109|P19474-2|TRIM21 42.09456458481378 0.053291022336892 2 {I|L}{I|L}TR 4 7 37.735 0.0 0.0 3.7086 0.0 0.0 181.07645624707976 350.11017786197505 531.1866341090548 0.0 0.0 0.0 0.0 0 1.0 0.0 1.2302046884880935 0.0 {I|L}{I|L}TR 3.7086 - 91 + 1 1.934 63846.2 1.0 3407 3430 6831 DOHH2_400M_050219_2,6839 DOHH2_400M_050219_2,6839,ITDHGSLIY True True ITDHGSLIY 36.914591 509.764086902142 3105820.0 6831.0 ENSG00000132109|ENST00000254436|TRIM21;;nc|ENSG00000132109|P19474-2|TRIM21 4.147587140401204 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6840 36.919 243.0 411570.0 25 0 20408.0 + 819 AETARLTSF 9 120 498.261887047662 0 498.2623779177666 PEAK CID FTMS 0 0 0 6831 178622.28125 1.0 0 0.0 9 Unmodified _AETARLTSF_ ENSG00000166226|ENST00000299300|CCT2;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;ENST00000549933.5_1_12:69979244-69980637:+|nuORF;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;ENST00000551620.5_1_12:69979244-69983508:+|nuORF 32.037481411007896 0.1008621704287274 2 TA 2 7 14.068 0.0 0.0 1.4146 0.0 0.0 200.0811246612979 619.3223971002561 819.403521761554 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 + TA 1.4146 + + 121 + 1 1.934 78166.9 1.0 3408 3430 6831 DOHH2_400M_050219_2,6840 DOHH2_400M_050219_2,6840,AETARLTSF True True AETARLTSF 36.919116 498.262377917767 964829.875 6831.0 ENST00000549933.5_1_12:69979244-69980637:+|nuORF;;ENST00000550638.5_1_12:69979244-69982049:+|nuORF;;ENST00000546859.5_1_12:69979244-69981900:+|nuORF;;ENST00000551620.5_1_12:69979244-69983508:+|nuORF;;ENST00000550455.5_1_12:69979244-69981425:+|nuORF;;ENSG00000166226|ENST00000299300|CCT2 4.76233156522115 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6841 36.929 548.0 310890.0 25 0 41504.0 + 35234 SSDSVGGFRY 10 144 537.7463402989189 1073.4781276646377 2 537.7466308474541 MULTI CID FTMS 0 0 0 6831 153481.90625 0.2232663406860503 -1 0.1120567321777343 10 Unmodified _SSDSVGGFRY_ ENSG00000113282|ENST00000411809|CLINT1;nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1 82.5293158979368 0.0149949422200525 2 {[CA]|SS}DSVGG{M(Oxidation (M))|F}RY 10 0 + 56.967 0.0 0.0 5.3067 5.3067 77.806 0.0 0.0 0.0 7.269987279362624 7.309785965855497 7.269987279362624 3.521825181113627 0 1.3494850021680094 0.0 0.4247425010840047 0.6139829889124311 + + {[CA]|SS}DSVGG{M(Oxidation (M))|F}RY;{[CA]|SS}DSVN{M(Oxidation (M))|F}RY;{[CA]|SS}DSVY[RN]{M(Oxidation (M))|F};{[CA]|SS}DSRG{M(Oxidation (M))|F}RY;{[CA]|SS}DSVGG[YR]{M(Oxidation (M))|F};{[CA]|SS}DSV{[MG]|[TS]}[KT]Y;{[CA]|SS}DSVN[YR]{M(Oxidation (M))|F};{[CA]|SS}DSVG[WH]S{I|L};{[CA]|SS}DSYV[RN]{M(Oxidation (M))|F};{[CA]|SS}DSVG[WH]TV 5.3067;4.9787;4.6258;4.3952;4.1126;3.9694;3.7845;3.5665;3.5355;3.4387 +;-;-;-;-;-;-;-;-;- + 973 + 1 1.934 133679.0 1.0 3409 3430 6831 DOHH2_400M_050219_2,6841 DOHH2_400M_050219_2,6841,SSDSVGGFRY True True SSDSVGGFRY 36.928754 537.746630847454 8595656.0 6831.0 ENSG00000113282|ENST00000411809|CLINT1;;nc|ENSG00000113282|Q14677-2|CLINT1;;nc|ENSG00000113282|Q14677-3|CLINT1 7.663503487904866 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6842 36.933 236.0 402210.0 25 0 100120.0 -1 0 114 398.23009292118985 397.22281645458986 1 398.2303039431572 MULTI CID FTMS 0 0 0 6831 150491.046875 0.2430101902818399 -3 0.1820526123046875 11 2 {I|L} 1 -1 9.8329 0.0 0.0 2.4754 0.0 0.0 266.12799636357266 0.0 266.12799636357266 0.0 9.832881222565248 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.4754 - 3 + 1 1.934 81165.2 1.0 3410 3430 6831 DOHH2_400M_050219_2,6842 DOHH2_400M_050219_2,6842, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6843 36.947 800.0 106220.0 25 0 4427.8 7615 EIRHECSSRVL 11 120 664.8389097237143 1327.6632665142286 2 664.8392211794853 MULTI CID FTMS 0 0 0 6831 152277.15625 1.0 0 0.0 12 Unmodified _EIRHECSSRVL_ ENST00000339526.8_1_1:182360552-182360696:-|nuORF 15.248480904072842 0.7179608125786238 2 {[SA]|[TG]}N[Q{I|L}]PSQSANV{I|L} 13 9 + 90.929 0.0 0.0 6.8488 6.8488 78.37 0.0 0.0 0.0 0.1095025908493312 16.642078980768076 0.1095025908493312 0.1095025908493312 0 0.5418727718234408 0.8538719643217619 1.8452266673433144 0.805462187404089 {[SA]|[TG]}N[Q{I|L}]PSQSANV{I|L};[AG]GS[Q{I|L}]PSQSANV{I|L};[AG]GV[QT]PSQSANV{I|L};{[QG]|[NA]}S[Q{I|L}]PSQSANV{I|L};{[NV]|[RG]}A[QT]PSQSANV{I|L};{[SA]|[TG]}GG[Q{I|L}]PSQSANV{I|L};{[SA]|[TG]}N[Q{I|L}]PSQSAGGV{I|L};{[SA]|[TG]}N[Q{I|L}]PS[AG]SANV{I|L};[AG]GS[Q{I|L}]PSQSAGGV{I|L};[AG]GS[Q{I|L}]PS[AG]SANV{I|L} 6.8488;6.8405;6.4812;6.3952;6.2626;6.1654;6.1654;6.1654;6.1589;6.1589 -;-;-;-;-;-;-;-;-;- 1199 1 1.934 68444.3 0.7099999785423279 3411 3430 6831 DOHH2_400M_050219_2,6843 DOHH2_400M_050219_2,6843,EIRHECSSRVL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6844 36.953 303.0 243360.0 25 0 21618.0 15072 IMIMEVIL 8 105 481.2753467851406 960.5361406370812 2 481.2759582400322 MULTI CID FTMS 0 0 0 6831 148876.09375 1.0 0 0.0 13 Unmodified _IMIMEVIL_ ENST00000415279.1_1_1:106434930-106435587:+|nuORF 32.116972079565 0.368454113111938 2 {I|L}P{M(Oxidation (M))|F}Q 4 6 47.964 0.0 0.0 4.9934 0.0 0.0 0.0 472.2411287897094 472.2411287897094 25.20008297468017 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.3807196863200844 {I|L}P{M(Oxidation (M))|F}Q 4.9934 - 233 + 1 1.934 62892.1 1.0 3412 3430 6831 DOHH2_400M_050219_2,6844 DOHH2_400M_050219_2,6844,IMIMEVIL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6845 36.957 149.0 676100.0 25 0 50592.0 + 32769 SEDRSVRIW 9 120 383.2006185826977 1146.5800263482931 3 383.1992980837822 MULTI CID FTMS 0 0 0 6831 139240.296875 0.2427609322495067 -1 0.1120567321777343 14 Unmodified _SEDRSVRIW_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 41.95555342248728 0.0647214845423414 2 SEDRSVR{I|L}W 9 0 + 88.938 0.0 0.0 7.7568 7.7568 84.412 0.0 0.0 0.0 33.46787486224656 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.6861818737241735 1.6989700043360187 0.4247425010840047 0.3494850021680094 + + SEDRSVR{I|L}W;SEDRSVRW{I|L};SEDA[TA]VR{I|L}W;SEG[DV]SVR{I|L}W;SEGE[TA]VR{I|L}W;SED[VG]SVR{I|L}W;SEDA[TA]VRW{I|L};SEGE[TA]VRW{I|L};SEG[DV]SVRW{I|L};SED[VG]SVRW{I|L} 7.7568;7.4943;6.9537;6.9537;6.9537;6.9537;6.6912;6.6912;6.6912;6.6912 +;-;-;-;-;-;-;-;-;- + 342 + 1 1.934 85275.9 1.0 3413 3430 6831 DOHH2_400M_050219_2,6845 DOHH2_400M_050219_2,6845,SEDRSVRIW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6846 36.97 790.0 148780.0 25 0 16235.0 28100 PPLLSKTS 8 179 421.7511096353617 841.4876663375235 2 421.7514221072197 MULTI CID FTMS 0 0 0 6831 118749.8671875 0.5161226365801241 -7 0.3439140319824219 15 Unmodified _PPLLSKTS_ ENST00000604759.1_1_14:39684292-39684520:+|nuORF 4.3292370932331545 0.7980541185046766 2 {I|L} 1 7 9.6041 0.0 0.0 1.1413 0.0 0.0 710.3928615052954 0.0 710.3928615052954 0.0 -0.5731938998424368 -0.5731938998424368 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1413 + + 30 + 1 1.934 92959.6 1.0 3414 3430 6831 DOHH2_400M_050219_2,6846 DOHH2_400M_050219_2,6846,PPLLSKTS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6847 36.973 123.0 654560.0 25 0 113330.0 + 26359 NSRIKLGL 8 84 450.7849741702822 899.5553954073645 2 450.7852050662041 MULTI CID FTMS 0 0 0 6831 114267.7265625 0.1445399015684178 -1 0.1120567321777343 16 Unmodified _NSRIKLGL_ ENSG00000124575|ENST00000244534|H1-3;ENSG00000168298|ENST00000304218|H1-4;ENSG00000184357|ENST00000331442|H1-5;ENSG00000187837|ENST00000343677|H1-2 60.07390631473393 0.1152413078224327 2 [NS]R{I|L}K{I|L}G{I|L} 8 0 + 63.155 0.0 0.0 7.0207 7.0207 83.452 0.0 0.0 0.0 3.336134377877329 14.904630595263413 3.336134377877329 3.336134377877329 0 1.6549471895720984 1.0 0.4247425010840047 0.3252574989159953 + + [NS]R{I|L}K{I|L}G{I|L};{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}K{I|L}G{I|L} 7.0207;6.6498 +;- + 69 1 1.934 66712.6 1.0 3415 3430 6831 DOHH2_400M_050219_2,6847 DOHH2_400M_050219_2,6847,NSRIKLGL True True NSRIKLGL 36.972864 450.785205066204 3916230.5 6831.0 ENSG00000184357|ENST00000331442|H1-5;;ENSG00000168298|ENST00000304218|H1-4;;ENSG00000187837|ENST00000343677|H1-2;;ENSG00000124575|ENST00000244534|H1-3 2.8187177379926047 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6848 36.98 372.0 403330.0 25 0 77191.0 + 40564 VKGKSGSG 8 175 360.2061788433893 718.3978047535786 2 360.2058288455009 MULTI CID FTMS 0 0 0 6831 139001.390625 0.8550732605714535 1 -0.1163253784179687 17 Unmodified _VKGKSGSG_ REV__ENST00000473395.1_1_2:198365100-198366019:+|nuORF 0.0 0.8243325171867699 2 {I|L} 1 -1 10.969 0.0 0.0 1.5269 0.0 0.0 587.3030151801396 0.0 587.3030151801396 0.0 0.9691001300805624 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5269 - 35 + 1 1.934 117097.7 1.0 3416 3430 6831 DOHH2_400M_050219_2,6848 DOHH2_400M_050219_2,6848,VKGKSGSG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6849 36.988 478.0 177490.0 25 0 15611.0 + 7283 EETVVPKTF 9 121 525.2799494829825 1048.5453460327649 2 525.2801391482353 MULTI CID FTMS 0 0 0 6831 89926.0625 1.0 0 0.0 18 Unmodified _EETVVPKTF_ ENSG00000147789|ENST00000532777|ZNF7;nc|ENSG00000147789|P17097-2|ZNF7 17.11289562659939 0.3734572693229295 2 {[TV]|[{I|L}S]}[YK]V 5 6 21.138 0.0 0.0 2.0159 0.0 0.0 0.0 455.1797203826274 455.1797203826274 6.533408749793573 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.5451140161145328 0.0 {[TV]|[{I|L}S]}[YK]V 2.0159 - 334 1 1.934 70204.6 1.0 3417 3430 6831 DOHH2_400M_050219_2,6849 DOHH2_400M_050219_2,6849,EETVVPKTF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6850 36.991 66.0 548990.0 25 0 66055.0 + + 207 AAGRPLEL 8 66 413.238996635502 824.463440337804 2 413.7419921755791 MULTI CID FTMS 0 0 0 6831 414027.8125 0.887820719437612 -1 0.1120567321777343 19 Unmodified _AARGTPRP_ ENSG00000120802|ENST00000556029|TMPO;nc|ENSG00000120802|P42167-2|TMPO 5.760428011301431 0.7893668129297577 2 {I|L} 1 -1 13.495 0.0 0.0 1.6368 0.0 0.0 693.3685134352634 0.0 693.3685134352634 0.0 12.385606273598311 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.6368 - 13 + 1 1.934 33859.1 1.0 3418 3430 6831 DOHH2_400M_050219_2,6850 DOHH2_400M_050219_2,6850,AARGTPRP False False AAGRPLEL 36.990753 413.741992175579 2971386.5 6831.0 ENSG00000120802|ENST00000556029|TMPO;;nc|ENSG00000120802|P42167-2|TMPO 2.275979518890381 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6851 37.005 800.0 56409.0 25 0 8133.7 -1 0 47 1045.4366036672122 3133.2879816018367 3 1046.105395495892 MULTI CID FTMS 0 0 0 6831 136009.796875 1.0 0 0.0 20 2 V 1 -1 0.088644 0.0 0.0 0.0028291 0.0 0.0 2092.692352795 938.5155733697874 3031.207926164787 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.0028291 - 3 + 1 1.934 45509.8 0.550000011920929 3419 3430 6831 DOHH2_400M_050219_2,6851 DOHH2_400M_050219_2,6851, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6853 37.011 145.0 603300.0 25 0 32341.0 + 8137 AGADHIITM 9 114 473.2916340000108 944.5687150668216 2 473.2922546267509 MULTI CID FTMS 0 0 0 6852 232325.8125 0.2846354153306402 2 -0.2319908142089843 1 Unmodified _EPLAKKIF_ ENSG00000147224|ENST00000372435|PRPS1;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;ENSG00000229937|ENST00000506618|PRPS1L1;ENSG00000101911|ENST00000380668|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1;nc|ENSG00000101911|P11908-2|PRPS2 30.22481116460888 0.4082965392918993 2 EP{I|L}AK{I|L}K 7 2 29.607 0.0 0.0 3.1344 0.0 0.0 0.0 162.05640588931877 162.05640588931877 5.142682348509243 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 EP{I|L}AK{I|L}K 3.1344 - 333 + 1 1.94 74322.4 1.0 3420 3431 6852 DOHH2_400M_050219_2,6853 DOHH2_400M_050219_2,6853,EPLAKKIF False True AGADHIITM 37.011372 473.292254626751 11968093.0 6852.0 ENSG00000147224|ENST00000372435|PRPS1;;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;;ENSG00000229937|ENST00000506618|PRPS1L1;;ENSG00000101911|ENST00000380668|PRPS2;;nc|ENSG00000147224|P60891-2|PRPS1;;nc|ENSG00000101911|P11908-2|PRPS2 5.308235168457031 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6854 37.016 272.0 262880.0 25 0 29384.0 -1 0 98 909.0597768774452 2724.157501232535 3 909.3940307497978 MULTI CID FTMS 0 0 0 6852 251928.390625 0.2525496153256482 2 -0.2319908142089843 2 2 [YG]S{[NV]|[RG]}SQ[TP]Y 10 -1 41.734 0.0 0.0 1.532 0.0 0.0 0.0 1624.6563360769346 1624.6563360769346 14.09124416886019 0.0 0.0 0.0 0 0.0 2.0 1.6861818737241734 0.7302046884880937 [YG]S{[NV]|[RG]}SQ[TP]Y 1.532 - 2680 1 1.94 54172.5 1.0 3421 3431 6852 DOHH2_400M_050219_2,6854 DOHH2_400M_050219_2,6854, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6855 37.018 93.0 1027700.0 25 0 76847.0 + 22374 LPSRKLVAL 9 85 498.8316458597671 995.6487387863342 2 498.8318969607353 MULTI CID FTMS 0 0 0 6852 704070.1875 0.8639437971008157 -1 0.1163253784179687 3 Unmodified _LPSRKLVAL_ ENSG00000128789|ENST00000317615|PSMG2;nc|ENSG00000128789|Q969U7-2|PSMG2;PSMG2|p.M147Cfs*9|1|0.11|ENSG00000128789|chr18:12720539-12720539|C/-|frameshift_variant 40.23920728925047 0.0741434193262949 2 [{I|L}V]N[RV]V{I|L}A{I|L} 9 5 + 41.889 0.0 0.0 4.2072 4.2072 71.465 0.0 0.0 0.0 3.445531853034254 8.996294548824366 3.445531853034254 1.9897000433601804 0 0.9247425010840048 0.8538719643217619 0.0 0.0 [{I|L}V]N[RV]V{I|L}A{I|L};[{I|L}V]N[RV]VA{I|L}{I|L};{[VA]|[{I|L}G]}[VG][RV]V{I|L}A{I|L};[{I|L}V]N[RV]{I|L}VA{I|L};{[VA]|[{I|L}G]}[VG][RV]VA{I|L}{I|L};[{I|L}V]N[RV]{I|L}G{I|L}{I|L};[{I|L}V]GG[RV]V{I|L}A{I|L};{[VA]|[{I|L}G]}[VG][RV]{I|L}VA{I|L};[{I|L}V]GG[RV]VA{I|L}{I|L};{[VA]|[{I|L}G]}[VG][RV]{I|L}G{I|L}{I|L} 4.2072;4.0074;3.7315;3.728;3.5316;3.5281;3.2824;3.2523;3.0825;3.0524 -;-;-;-;-;-;-;-;-;- 270 1 1.94 78886.8 1.0 3422 3431 6852 DOHH2_400M_050219_2,6855 DOHH2_400M_050219_2,6855,LPSRKLVAL True True LPSRKLVAL 37.018459 498.831896960735 10373962.0 6852.0 PSMG2|p.M147Cfs*9|1|0.11|ENSG00000128789|chr18:12720539-12720539|C/-|frameshift_variant;;ENSG00000128789|ENST00000317615|PSMG2;;nc|ENSG00000128789|Q969U7-2|PSMG2 4.135912736256917 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6856 37.021 125.0 773150.0 25 0 100680.0 + 4756 DEIERKFDKW 10 81 683.3435848662751 1364.6726167993502 2 683.3437377810478 MULTI CID FTMS 0 0 0 6852 479847.53125 1.0 0 0.0 4 Unmodified _DEIERKFDKW_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 45.003709309572464 0.1094750793640421 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ERK{M(Oxidation (M))|F}DKW 10 0 + 67.484 0.0 0.0 4.9451 4.9451 77.198 0.0 0.0 0.0 4.129172106187582 4.129172106187582 4.129172106187582 4.129172106187582 0 2.4291746928241125 0.0 0.3807196863200844 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ERK{M(Oxidation (M))|F}DKW;DE{I|L}[WR][W{M(Oxidation (M))|F}]KW;{[CT]|[{M(Oxidation (M))|F}G]}K{[{M(Oxidation (M))|F}H]|[RQ]}[PG]{M(Oxidation (M))|F}DKW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ERK{M(Oxidation (M))|F}[QP]{[CT]|[{M(Oxidation (M))|F}G]};{[CT]|[{M(Oxidation (M))|F}G]}K[Y{M(Oxidation (M))|F}]KWW{[CT]|[{M(Oxidation (M))|F}G]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ERKWW{[CT]|[{M(Oxidation (M))|F}G]} 4.9451;4.6425;3.193;1.8462;1.1123;1.0531 +;-;-;-;-;- + 167 1 1.94 77316.0 1.0 3423 3431 6852 DOHH2_400M_050219_2,6856 DOHH2_400M_050219_2,6856,DEIERKFDKW True True DEIERKFDKW 37.021041 683.343737781048 34379577.5 6852.0 ENST00000466404.5_1_19:54621832-54631576:+|nuORF;;nc|ENSG00000105618|Q8WWY3-3|PRPF31;;nc|ENSG00000105618|Q8WWY3-2|PRPF31;;ENSG00000105618|ENST00000321030|PRPF31;;nc|ENSG00000105618|Q8WWY3-4|PRPF31 8.247147560119629 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6857 37.024 124.0 735000.0 25 0 51617.0 + 1015 AGADHIITM 9 129 472.7285750363295 943.4425971394588 2 472.7289306521416 MULTI CID FTMS 0 0 0 6852 427887.375 1.0 0 0.0 5 Oxidation (M) _AGADHIITM(Oxidation (M))_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 50.855029805455786 0.0384952370514206 2 {[YC]|[HE]}{I|L}{I|L}QGT{M(Oxidation (M))|F} 8 6 + 52.013 0.0 0.0 5.5131 5.5131 78.983 0.0 0.0 0.0 29.184531067637423 2.5004522958635533 2.5004522958635533 3.802112417116064 0 0.3807196863200844 0.0 0.7059771852360797 0.0 {[YC]|[HE]}{I|L}{I|L}QGT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}{I|L}ANT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}{I|L}AGGT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}AQVT{M(Oxidation (M))|F};[HD]AQ{I|L}{I|L}T{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}Q{I|L}GT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}A{I|L}NT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}A{I|L}GGT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}AG{I|L}GT{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}QAVT{M(Oxidation (M))|F} 5.5131;5.1101;5.0559;4.9365;4.8717;4.6883;4.6883;4.6341;4.6341;4.5335 -;-;-;-;-;-;-;-;-;- 667 + 1 1.94 72846.8 1.0 3424 3431 6852 DOHH2_400M_050219_2,6857 DOHH2_400M_050219_2,6857,AGADHIITM True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6858 37.027 164.0 647150.0 25 0 65265.0 + 44263 YLKVKGNVF 9 107 534.3160450899084 1066.6175372466166 2 534.3157226443291 MULTI CID FTMS 0 0 0 6852 342546.375 0.1901200494134203 -1 0.1163253784179687 6 Unmodified _YLKVKGNVF_ ENSG00000108298|ENST00000225430|RPL19;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;ENST00000429272.1_1_2:131051524-131051887:+|nuORF;ENST00000472309.1_1_4:179208113-179208287:+|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 78.14939416004806 0.0179651292570206 2 Y{I|L}KV[W{I|L}]V{M(Oxidation (M))|F} 8 3 + 73.141 0.0 0.0 6.8573 6.8573 92.834 0.0 0.0 0.0 28.781446971601312 13.99674684468792 13.99674684468792 15.053950318867066 0 1.9291746928241125 2.0 0.0 0.3494850021680094 Y{I|L}KV[W{I|L}]V{M(Oxidation (M))|F};[Y{I|L}]KV[KG]NV{M(Oxidation (M))|F};[Y{I|L}]KV[W{I|L}]V{M(Oxidation (M))|F};[Y{I|L}]KV[KG]GGV{M(Oxidation (M))|F};[NG]VKKV{I|L}Y{M(Oxidation (M))|F};[NG]VKVK{I|L}Y{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}KNGV{I|L}Y{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[NG]KV{I|L}Y{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[NG]VK{I|L}Y{M(Oxidation (M))|F};[K{I|L}]QQK{I|L}Y{M(Oxidation (M))|F} 6.8573;5.4459;5.2859;4.5826;3.7334;3.7107;3.547;3.2432;3.2205;3.1603 -;+;-;-;-;-;-;-;-;- + 828 + 1 1.94 87034.8 1.0 3425 3431 6852 DOHH2_400M_050219_2,6858 DOHH2_400M_050219_2,6858,YLKVKGNVF True True YLKVKGNVF 37.026818 534.315722644329 20567546.0 6852.0 ENST00000472309.1_1_4:179208113-179208287:+|nuORF;;ENST00000429272.1_1_2:131051524-131051887:+|nuORF;;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;;ENSG00000108298|ENST00000225430|RPL19 6.021884600321452 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6859 37.031 231.0 268020.0 25 0 24638.0 + 25983 NLQIKENAL 9 98 521.7982516644674 0 521.7983886599541 PEAK CID FTMS 0 0 0 6852 211537.296875 1.0 0 0.0 7 Unmodified _NLQIKENAL_ ENSG00000129003|ENST00000644861|VPS13C;ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 81.89019881105858 0.0126191756360086 2 Q{I|L} 2 7 27.519 0.0 0.0 2.642 0.0 0.0 227.12859453811603 570.2899263971311 797.4185209352472 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.5 + Q{I|L} 2.642 + + 125 + 1 1.94 50925.0 1.0 3426 3431 6852 DOHH2_400M_050219_2,6859 DOHH2_400M_050219_2,6859,NLQIKENAL True True NLQIKENAL 37.031166 521.798388659954 972561.875 6852.0 ENSG00000197969|ENST00000360280|VPS13A;;nc|ENSG00000197969|Q96RL7-2|VPS13A;;nc|ENSG00000129003|Q709C8-4|VPS13C;;ENSG00000129003|ENST00000644861|VPS13C;;nc|ENSG00000197969|Q96RL7-4|VPS13A;;nc|ENSG00000129003|Q709C8-2|VPS13C;;nc|ENSG00000129003|Q709C8-3|VPS13C;;nc|ENSG00000197969|Q96RL7-3|VPS13A 6.2852864265441895 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6860 37.045 800.0 136980.0 25 0 8763.7 -1 0 107 881.9119343069236 1761.8093156806472 2 882.4135009646416 MULTI CID FTMS 0 0 0 6852 179343.484375 0.7779709717033143 -1 0.1163253784179687 8 2 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}R[YQ][KP]EN{I|L}DP{[QN]|[E{I|L}]|[KN]} 14 -1 + 58.68 0.0 0.0 3.3307 3.3307 74.687 0.0 0.0 0.0 5.680373320598235 23.340314232235 5.680373320598235 7.015449934959719 0 0.9247425010840048 0.0 0.3252574989159953 1.7218487496163564 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}R[YQ][KP]EN{I|L}DP{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}R[YQ][KP]EN{I|L}DV[HC];[NP]{I|L}NE{[QG]|[NA]}ERG{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[NP]{I|L}NE{[QG]|[NA]}ERG{M(Oxidation (M))|F}YP{[QN]|[E{I|L}]|[KN]};{[QV]|[N{I|L}]|[RA]|[KV]}PNE{[QG]|[NA]}ERG{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[QV]|[N{I|L}]|[RA]|[KV]}PNE{[QG]|[NA]}ERG{M(Oxidation (M))|F}YP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}NE{[QG]|[NA]}{[WT]|[RM]}H{I|L}DP{[QN]|[E{I|L}]|[KN]};[YQ][W{M(Oxidation (M))|F}]QERG{M(Oxidation (M))|F}YP{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GREQ[W{M(Oxidation (M))|F}]{[WS]|[C(Carbamidomethyl (C)){I|L}]};[NP]{I|L}NE{[QG]|[NA]}E[VG]G{M(Oxidation (M))|F}YP{[QN]|[E{I|L}]|[KN]} 3.3307;2.9325;2.0499;2.0499;1.8556;1.8556;1.6684;1.6335;1.6335;1.5374 -;-;-;-;-;-;-;-;-;- 1067 1 1.94 76096.4 0.75 3427 3431 6852 DOHH2_400M_050219_2,6860 DOHH2_400M_050219_2,6860, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6861 37.059 800.0 187720.0 25 0 20024.0 + 45418 YTDFDGTRVY 10 110 618.7799248705649 1235.5452968079296 2 618.7794067263603 MULTI CID FTMS 0 0 0 6852 144198.265625 0.0873602406767228 8 -0.8094558715820312 9 Unmodified _YTDFDGTRVY_ ENSG00000102096|ENST00000376509|PIM2;ENSG00000137193|ENST00000373509|PIM1;ENSG00000198355|ENST00000360612|PIM3;nc|ENSG00000137193|P11309-2|PIM1 57.10758569107544 0.0441734977746303 2 YTD{M(Oxidation (M))|F}DGTRVY 10 0 + 98.955 0.0 0.0 8.009 8.009 94.454 0.0 0.0 0.0 80.728590856098 19.526071122992832 19.526071122992832 12.730012720637376 0 1.6549471895720984 2.0 0.7614393726401688 0.0 + + YTD{M(Oxidation (M))|F}DGTRVY;YTD{M(Oxidation (M))|F}D[WK]VY;YTD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YRVY;YTD{M(Oxidation (M))|F}Q{[WT]|[RM]}{I|L}Y;YTD{M(Oxidation (M))|F}[AG]{[WT]|[RM]}{I|L}Y;YTD{M(Oxidation (M))|F}{[HG]|PP}[EP][RD];{[TV]|[{I|L}S]}[HV]TGD{M(Oxidation (M))|F}D[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}[HV]TGD[MD]VY;{[TV]|[{I|L}S]}[HV]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D[{M(Oxidation (M))|F}V];{[ES]|[DT]|[{I|L}C]}[W{I|L}]{[HG]|PP}{M(Oxidation (M))|F}D[{M(Oxidation (M))|F}V] 8.009;6.9787;6.0269;5.8804;5.1352;4.3076;3.2179;2.0869;1.4261;1.307 +;-;-;-;-;-;-;-;-;- + 211 + 1 1.94 111814.6 0.6899999976158142 3428 3431 6852 DOHH2_400M_050219_2,6861 DOHH2_400M_050219_2,6861,YTDFDGTRVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6862 37.068 545.0 161400.0 25 0 7044.3 + 13124 HEVPYTTSF 9 136 540.753332776134 1079.492112619068 2 540.7533447146416 MULTI CID FTMS 0 0 0 6852 121841.859375 0.1927628752420697 2 -0.2319908142089843 10 Unmodified _HEVPYTTSF_ ENSG00000119638|ENST00000238616|NEK9;ENST00000556170.5_1_14:75553702-75572727:-|nuORF;ENST00000557026.5_1_14:75551269-75572727:-|nuORF 32.30548876998284 0.1201446275138228 2 {[YC]|[HE]}VPYT 6 3 30.138 0.0 0.0 2.7919 0.0 0.0 0.0 350.1358888421417 350.1358888421417 9.679250024847263 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 + {[YC]|[HE]}VPYT 2.7919 + + 450 1 1.94 71711.2 1.0 3429 3431 6852 DOHH2_400M_050219_2,6862 DOHH2_400M_050219_2,6862,HEVPYTTSF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6863 37.073 272.0 637620.0 25 0 133710.0 + 11267 GETPQTDVRW 10 120 594.7853673357007 1187.5561817382013 2 594.7857543826103 MULTI CID FTMS 0 0 0 6852 86011.2265625 0.209928205077357 -2 0.2283821105957031 11 Unmodified _GETPQTDVRW_ ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB 55.23464941255904 0.0494277333541689 2 {[DA]|[EG]}TPQTDVRW 10 0 {[DA]|[EG]} + + 68.881 25.458 13.682 5.8003 5.8003 58.739 0.0 0.0 0.0 0.0 30.693897340162906 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.805462187404089 + + {[DA]|[EG]}TPQTDVRW 5.8003 + + 386 + 1 1.94 133268.0 1.0 3430 3431 6852 DOHH2_400M_050219_2,6863 DOHH2_400M_050219_2,6863,GETPQTDVRW True True GETPQTDVRW 37.073478 594.78575438261 3038023.0 6852.0 nc|ENSG00000089597|Q14697-2|GANAB;;ENSG00000089597|ENST00000356638|GANAB 8.22255309422811 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6864 37.083 476.0 266450.0 25 0 17127.0 915 AEYVSAREW 9 132 555.7637517625567 1109.5129505919133 2 555.2580444216728 MULTI CID FTMS 0 0 0 6852 84277.0859375 1.0 0 0.0 12 Unmodified _AEYVSAREW_ ENSG00000115524|ENST00000335508|SF3B1;ENST00000496458.1_1_2:198262707-198263303:-|nuORF 15.248480904072842 0.4239247793462406 2 {[CP]|[EA]}YVW[QA]P{M(Oxidation (M))|F} 9 4 + 29.024 0.0 0.0 2.6159 2.6159 66.843 0.0 0.0 0.0 11.70696227168975 0.5909929536735419 0.5909929536735419 1.7609125905568064 0 0.8494850021680094 0.0 0.0 0.5 {[CP]|[EA]}YVW[QA]P{M(Oxidation (M))|F};{[CP]|[EA]}YVW[QP]A{M(Oxidation (M))|F};{[CP]|[EA]}YVT{[{M(Oxidation (M))|F}H]|[RQ]}P{M(Oxidation (M))|F};{[CP]|[EA]}YVS[YE]{I|L}H;{[CP]|[EA]}YV[KC][PG]P{M(Oxidation (M))|F};{[CP]|[EA]}YVT{[YD]|[{M(Oxidation (M))|F}M]}{I|L}H;{[CP]|[EA]}YVT[WR]W;{[CP]|[EA]}YV{[DA]|[EG]}[QA]P{M(Oxidation (M))|F};{[CP]|[EA]}YV{[DA]|[EG]}[QP]A{M(Oxidation (M))|F};{[CP]|[EA]}YVS[SG][PG]P{M(Oxidation (M))|F} 2.6159;2.4572;2.3446;2.2477;2.0573;2.0367;1.9035;1.786;1.6273;1.4377 -;-;-;-;-;-;-;-;-;- 1360 + 1 1.94 98780.2 1.0 3431 3431 6852 DOHH2_400M_050219_2,6864 DOHH2_400M_050219_2,6864,AEYVSAREW False True SEEEIREAF 37.08309 555.258044421673 546137.1875 6852.0 ENSG00000160014|ENST00000291295|CALM3;;ENST00000482532.5_1_2:47387917-47389823:-|nuORF;;ENST00000585658.1_1_17:68237680-68237866:+|nuORF;;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;;ENST00000597868.5_1_19:47104691-47111872:+|nuORF;;ENSG00000198668|ENST00000356978|CALM1;;ENSG00000143933|ENST00000272298|CALM2 3.5288027127583823 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6865 37.094 640.0 169510.0 25 0 22342.0 + 30460 READLDFARQY 11 101 461.8935244011201 0 461.8934203982353 PEAK CID FTMS 0 0 0 6852 79475.484375 1.0 0 0.0 13 Unmodified _READLDFARQY_ ENSG00000131558|ENST00000253861|EXOC4 30.41366949970193 0.2236921607676731 2 D{M(Oxidation (M))|F}K 3 9 12.466 0.0 0.0 1.3524 0.0 0.0 123.40887784632248 405.1562899225219 528.5651677688444 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3252574989159953 D{M(Oxidation (M))|F}K 1.3524 - 62 + 1 1.94 91499.6 1.0 3432 3431 6852 DOHH2_400M_050219_2,6865 DOHH2_400M_050219_2,6865,READLDFARQY False True READLDFARQY 37.09424 461.893420398235 488218.59375 6852.0 ENSG00000131558|ENST00000253861|EXOC4 3.8907528718312574 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6866 37.096 94.0 538940.0 25 0 23738.0 + 2662 ATDLAQHLY 9 99 516.2616561055462 0 516.2618286013603 PEAK CID FTMS 0 0 0 6852 153803.875 0.4089764478844045 -1 0.1163253784179687 14 Unmodified _ATDLAQHLY_ ENSG00000163492|ENST00000443758|CCDC141;nc|ENSG00000163492|Q6ZP82-1|CCDC141 64.23631603340823 0.0129441640563295 2 D{I|L}AQ 4 5 28.633 0.0 0.0 2.7785 0.0 0.0 172.08640927964854 428.1931551568969 600.2795644365455 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.6861818737241735 + D{I|L}AQ 2.7785 + + 99 + 1 1.94 44697.1 1.0 3433 3431 6852 DOHH2_400M_050219_2,6866 DOHH2_400M_050219_2,6866,ATDLAQHLY True True ATDLAQHLY 37.096299 516.26182860136 1810315.0 6852.0 nc|ENSG00000163492|Q6ZP82-1|CCDC141;;ENSG00000163492|ENST00000443758|CCDC141 8.40801207224528 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6867 37.101 237.0 404620.0 25 0 53911.0 40436 VIKGMRVL 8 100 458.2947296244439 0 458.2947265505791 PEAK CID FTMS 0 0 0 6852 137553.640625 0.5682425547620619 -1 0.1163253784179687 15 Unmodified _VIKGMRVL_ ENSG00000120063|ENST00000439174|GNA13 20.871210003555333 0.4015059659087983 2 VTVRKD 6 6 31.82 0.0 0.0 3.4793 0.0 0.0 131.0871161917218 82.06688867740468 213.15400486912648 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.6237125054200234 0.0 VTVRKD 3.4793 - 555 + 1 1.94 79827.2 1.0 3434 3431 6852 DOHH2_400M_050219_2,6867 DOHH2_400M_050219_2,6867,VIKGMRVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6868 37.115 800.0 53835.0 25 0 3400.6 43512 WWWWIWWQWW 10 75 874.9037639281709 1747.7929749231416 2 875.3984863162041 MULTI CID FTMS 0 0 0 6852 108594.015625 0.0457791502735992 23 -2.0947036743164062 16 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 2 WNN[NP]{[QN]|[E{I|L}]|[KN]} 7 8 24.793 0.0 0.0 1.4185 0.0 0.0 862.4253488486135 0.0 862.4253488486135 0.0 7.759169494624132 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 WNN[NP]{[QN]|[E{I|L}]|[KN]} 1.4185 - 88 1 1.94 34657.0 0.5600000023841858 3435 3431 6852 DOHH2_400M_050219_2,6868 DOHH2_400M_050219_2,6868,WWWWIWWQWW False False False False splicing PXD020620_cell_line DOHH2_400M_050219_2 6870 37.119 15.0 3046400.0 25 0 364530.0 + 1012 AGADHIITM 9 79 464.7315390040196 927.4485250748392 2 464.7316467165947 MULTI CID FTMS 0 0 0 6869 3471257.0 0.5506639562236323 1 -0.1220207214355468 1 Unmodified _AGADHIITM_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 36.04419817259434 0.0971720506436186 2 [HD]AQ{I|L}{I|L}TM 8 4 + 40.182 0.0 0.0 4.3325 4.3325 69.093 0.0 0.0 0.0 0.0763815229193909 0.0763815229193909 0.0763815229193909 0.0763815229193909 0 0.8935078169319297 0.0 0.7302046884880937 0.0 [HD]AQ{I|L}{I|L}TM;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[WK]TM;[YV]T[WK]TM;[HD]A{I|L}GA{I|L}TM;[H{I|L}]DAGA{I|L}TM;[HD]A{I|L}Q{I|L}TM;[HD]{I|L}AGA{I|L}TM;[H{I|L}]DQA{I|L}TM;[H{I|L}]DAQ{I|L}TM;[HD]{I|L}QA{I|L}TM 4.3325;4.3243;4.1283;4.0021;3.8844;3.8181;3.8123;3.7004;3.7004;3.6282 -;-;-;-;-;-;-;-;-;- 350 1 1.94 41909.9 1.0 3436 3432 6869 DOHH2_400M_050219_2,6870 DOHH2_400M_050219_2,6870,AGADHIITM True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6871 37.121 81.0 494290.0 25 0 81171.0 + 16000 ITDSAGHILY 10 81 545.2823428087136 1088.550132684227 2 545.2825805544853 MULTI CID FTMS 0 0 0 6869 399390.96875 0.231729847453155 2 -0.2322921752929687 2 Unmodified _ITDSAGHILY_ ENSG00000170348|ENST00000303575|TMED10 42.312485326615175 0.1331477410672653 2 {I|L}TD{[SA]|[TG]}GH{I|L}{I|L}Y 10 0 + 58.893 0.0 0.0 5.4103 5.4103 74.079 0.0 0.0 0.0 31.14130335360009 9.953132367022164 9.953132367022164 0.5115252244738144 0 1.6989700043360187 2.0 0.0 0.0 + + {I|L}TD{[SA]|[TG]}GH{I|L}{I|L}Y;{I|L}TD{[QS]|[NT]}H{I|L}{I|L}Y;{[RE]|[WV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[KS]D[VP] 5.4103;5.3633;0.11996 +;-;- + 203 + 1 1.94 35759.3 1.0 3437 3432 6869 DOHH2_400M_050219_2,6871 DOHH2_400M_050219_2,6871,ITDSAGHILY False True ITDSAGHILY 37.121219 545.282580554485 19909770.0 6869.0 ENSG00000170348|ENST00000303575|TMED10 5.903419176737468 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6872 37.122 34.0 2478300.0 25 0 360150.0 + 8324 ERLKVLYF 8 99 356.5463025267301 1066.6170781803903 3 356.5463134646416 MULTI CID FTMS 0 0 0 6869 1295657.875 1.0 0 0.0 3 Unmodified _ERLKVLYF_ nc|ENSG00000122008|Q9UBT6-2|POLK 32.30548876998284 0.3644845974844379 2 KV{I|L}Y{M(Oxidation (M))|F} 5 3 31.242 0.0 0.0 2.9291 0.0 0.0 398.2266712873063 0.0 398.2266712873063 0.0 16.63811573052314 0.0 0.0 0 0.2742275032520141 0.0 0.0 1.2302046884880935 + KV{I|L}Y{M(Oxidation (M))|F} 2.9291 + + 60 1 1.94 70796.1 1.0 3438 3432 6869 DOHH2_400M_050219_2,6872 DOHH2_400M_050219_2,6872,ERLKVLYF False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6873 37.124 64.0 934150.0 25 0 82351.0 + 22611 LPYIKQEV 8 83 495.2868510389953 988.5591491447906 2 495.2872497439384 MULTI CID FTMS 0 0 0 6869 793587.875 0.5937891741249197 -1 0.1099700927734375 4 Unmodified _LPYIKQEV_ ENSG00000047315|ENST00000314595|POLR2B 43.85829265575387 0.1697421968005898 2 {I|L}PY{I|L}K[DG]A{I|L} 9 4 + 64.011 0.0 0.0 6.4752 6.4752 94.267 0.0 0.0 0.0 23.873249492148915 0.6909945086313485 0.6909945086313485 50.84219589515433 0 1.1382104921644451 2.0 0.4247425010840047 0.0 {I|L}PY{I|L}K[DG]A{I|L};{I|L}[{M(Oxidation (M))|F}V]Q{I|L}{[DA]|[EG]}A{I|L} 6.4752;1.3322 -;- 687 + 1 1.94 53379.4 1.0 3439 3432 6869 DOHH2_400M_050219_2,6873 DOHH2_400M_050219_2,6873,LPYIKQEV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6874 37.126 81.0 899890.0 25 0 73213.0 + 11293 GEVEGHPVW 9 87 505.24015755067137 1008.4657621681428 2 505.2404968142509 MULTI CID FTMS 0 0 0 6869 719476.75 0.3542646975822869 -1 0.1099700927734375 5 Unmodified _GEVEGHPVW_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 42.09456458481378 0.0639583784996157 2 {[DA]|[EG]}VEGH[VP]W 9 0 + 63.082 0.0 0.0 6.2553 6.2553 93.459 0.0 0.0 0.0 41.27249243351191 7.447274948966935 7.447274948966935 43.01029995663981 0 1.1989700043360187 2.0 0.0 0.0 + + {[DA]|[EG]}VEGH[VP]W;{NN|[MP]|[D{I|L}]|[EV]}GH{[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}H]|[RQ]};[VP]HG[C(Carbamidomethyl (C))R]{[{M(Oxidation (M))|F}H]|[RQ]} 6.2553;1.9903;0.4522 +;-;- + 342 + 1 1.94 62823.4 1.0 3440 3432 6869 DOHH2_400M_050219_2,6874 DOHH2_400M_050219_2,6874,GEVEGHPVW True True GEVEGHPVW 37.125773 505.240496814251 10055211.0 6869.0 nc|ENSG00000102900|Q8N1F7-2|NUP93;;ENSG00000102900|ENST00000308159|NUP93 5.78818154335022 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6875 37.128 109.0 550750.0 25 0 35736.0 + 34639 SPNQKLLAV 9 101 485.2905554436069 968.5665579540138 2 485.2921020388603 MULTI CID FTMS 0 0 0 6869 335708.875 0.8594638813340123 -1 0.1099700927734375 6 Unmodified _SPNQKLLAV_ ENSG00000065183|ENST00000349139|WDR3 32.78568957990786 0.1150597335874693 2 [PS][KG]{[QG]|[NA]}{I|L}{I|L}AV 10 3 + 22.571 0.0 0.0 2.3303 2.3303 70.231 0.0 0.0 0.0 0.57582781025922 4.771212547196623 0.57582781025922 4.771212547196626 0 0.8182503180159344 1.5228787452803376 0.3807196863200844 0.0 [PS][KG]{[QG]|[NA]}{I|L}{I|L}AV;{[QN]|[E{I|L}]|[KN]}[PS]K{I|L}{I|L}AV;[NP]{[QS]|[NT]}K{I|L}{I|L}AV;[PS][KG]{[QG]|[NA]}{I|L}A{I|L}V;{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}R[TP];{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]{I|L}AV;[{I|L}A][W{I|L}]{I|L}R[TP];[{I|L}A][W{I|L}][PS]{I|L}AV;{[QN]|[E{I|L}]|[KN]}[PS]K{I|L}A{I|L}V;[NP]{[QS]|[NT]}K{I|L}A{I|L}V 2.3303;1.8377;1.7905;1.714;1.4324;1.4032;1.3148;1.2856;1.2214;1.1742 -;-;-;-;-;-;-;-;-;- 265 1 1.94 51760.4 1.0 3441 3432 6869 DOHH2_400M_050219_2,6875 DOHH2_400M_050219_2,6875,SPNQKLLAV True True SPNQKLLAV 37.128073 485.29210203886 2218728.0 6869.0 ENSG00000065183|ENST00000349139|WDR3 2.95758293569088 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6876 37.131 143.0 353420.0 25 0 26896.0 + 43954 KSDGSFIGY 9 85 487.234946106028 972.455339278856 2 487.2346984744072 MULTI CID FTMS 0 0 0 6869 241264.515625 0.2351581635910316 2 -0.2322921752929687 7 Unmodified _YGNVTSLGY_ ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENSG00000105221|ENST00000392038|AKT2 15.847184025352805 0.4077185912009129 2 GY 2 7 25.217 0.0 0.0 2.5931 0.0 0.0 734.3597867659639 0.0 734.3597867659639 0.0 15.46261525427152 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + GY 2.5931 + + 28 + 1 1.94 43202.9 1.0 3442 3432 6869 DOHH2_400M_050219_2,6876 DOHH2_400M_050219_2,6876,YGNVTSLGY False False KSDGSFIGY 37.130938 487.2358 5960732.0 6869.0 ENST00000537834.5_1_19:40745726-40771198:-|nuORF;;nc|ENSG00000105221|P31751-2|AKT2;;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;;ENSG00000105221|ENST00000392038|AKT2 0.3475910127162933 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6877 37.139 434.0 268680.0 25 0 18230.0 + + 16663 KIDENQLMY 9 145 576.2811217311034 1150.5476905290068 2 577.2817870974541 MULTI CID FTMS 0 0 0 6869 229472.3125 0.7447382569135698 -1 0.1099700927734375 8 Unmodified _KELNDQLEY_ nc|ENSG00000112851|Q96RT1-9|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-7|ERBIN 32.30548876998284 0.1201446275138228 2 [Y{M(Oxidation (M))|F}]{I|L}K{I|L}{[CA]|SS}MY 9 -1 + 52.598 0.0 0.0 4.5715 4.5715 79.474 0.0 0.0 0.0 30.3487179211534 15.104310818814994 15.104310818814994 7.983324797206279 0 0.0 0.0 0.6989700043360187 0.8494850021680094 [Y{M(Oxidation (M))|F}]{I|L}K{I|L}{[CA]|SS}MY;[Y{M(Oxidation (M))|F}]{I|L}KMRMY;[H{I|L}]{[QG]|[NA]}[YE]{I|L}EY;[AG]T[KQ]NQ{I|L}EY;[QP][TP]K{I|L}{[CA]|SS}MY;[H{I|L}][WY]Q{I|L}EY;{[QN]|[E{I|L}]|[KN]}{I|L}WW{I|L}EY;{[QN]|[E{I|L}]|[KN]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}EY;{[CP]|[EA]}SVVNQ{I|L}EY;[Y{M(Oxidation (M))|F}]{I|L}QNE[Q{I|L}]P 4.5715;3.8777;3.1996;2.9335;2.8366;2.8294;2.7518;2.751;2.6691;2.5772 -;-;-;-;-;-;-;-;-;- 1502 + 1 1.94 93506.2 1.0 3443 3432 6869 DOHH2_400M_050219_2,6877 DOHH2_400M_050219_2,6877,KELNDQLEY False False KIDENQLMY 37.138678 577.281787097454 2085676.875 6869.0 nc|ENSG00000112851|Q96RT1-9|ERBIN;;nc|ENSG00000112851|Q96RT1-3|ERBIN;;nc|ENSG00000112851|Q96RT1-5|ERBIN;;nc|ENSG00000112851|Q96RT1-2|ERBIN;;ENSG00000112851|ENST00000284037|ERBIN;;nc|ENSG00000112851|Q96RT1-4|ERBIN;;nc|ENSG00000112851|Q96RT1-8|ERBIN;;nc|ENSG00000112851|Q96RT1-6|ERBIN;;nc|ENSG00000112851|Q96RT1-7|ERBIN 4.2676699956258135 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6878 37.147 495.0 300890.0 25 0 68025.0 + 32770 SEDRSVRIW 9 113 574.2975517484152 1146.5805505636304 2 574.2964965701103 MULTI CID FTMS 0 0 0 6869 223634.46875 1.0 0 0.0 9 Unmodified _SEDRSVRIW_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 71.92227651296345 0.0203558744033348 2 {[ES]|[DT]|[{I|L}C]}DRSVR{I|L}W 9 0 + 55.614 0.0 0.0 4.8504 4.8504 80.733 0.0 0.0 0.0 29.41630954681237 14.09256854528806 14.09256854528806 8.068109453757657 0 0.7742275032520141 0.0 0.0 1.4049471895720984 + + {[ES]|[DT]|[{I|L}C]}DRSVR{I|L}W;W{I|L}C[TA]VR{I|L}W;{[ES]|[DT]|[{I|L}C]}DA[TA]VR{I|L}W;{[ES]|[DT]|[{I|L}C]}D[VG]SVR{I|L}W;W[WD]SVR{I|L}W;W{I|L}[C(Carbamidomethyl (C))D]VR{I|L}W;{[ES]|[DT]|[{I|L}C]}W[TA]VR{I|L}W;{[ES]|[DT]|[{I|L}C]}D{[QN]|[E{I|L}]|[KN]}[KQ]{I|L}W;W{I|L}[C(Carbamidomethyl (C))N][KQ]{I|L}W;W{I|L}[RK][MD]{I|L}W 4.8504;4.1468;4.0473;4.0473;3.6275;3.5818;3.194;2.8925;2.6262;2.2595 +;-;-;-;-;-;-;-;-;- + 264 + 1 1.94 114350.1 1.0 3444 3432 6869 DOHH2_400M_050219_2,6878 DOHH2_400M_050219_2,6878,SEDRSVRIW True True SEDRSVRIW 37.147423 574.29649657011 5153903.25 6869.0 ENST00000420783.7_1_3:49044839-49051550:+|nuORF;;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;;ENST00000489684.2_1_3:49044864-49050780:+|nuORF;;ENSG00000178252|ENST00000608424|WDR6 5.211610635121663 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6879 37.161 800.0 341590.0 25 0 23172.0 + 30426 VTEKVYADTGLY 12 169 679.8460101333385 1357.677467333477 2 679.8456298708916 MULTI CID FTMS 0 0 0 6869 210501.453125 0.1846967336761678 -1 0.1099700927734375 10 Carbamidomethyl (C) _RC(Carbamidomethyl (C))TFNKVTGLY_ ENST00000312814.10_1_7:112430370-112430523:-|nuORF 53.40400417844725 0.0987786977674846 2 {[TV]|[{I|L}S]}ASVVYADTG{I|L}Y 13 8 + 124.55 0.0 0.0 9.1738 9.1738 81.88 0.0 0.0 0.0 11.338031200885156 16.642078980768076 11.338031200885156 0.1722032235195456 0 1.9361818737241727 1.3010299956639813 2.80153844027246 0.0 {[TV]|[{I|L}S]}ASVVYADTG{I|L}Y;{[TV]|[{I|L}S]}GTVVYADTG{I|L}Y;{[TV]|[{I|L}S]}ASVVAYDTG{I|L}Y;{[TV]|[{I|L}S]}GTVVAYDTG{I|L}Y;{[TV]|[{I|L}S]}ASVVGYETG{I|L}Y;{[TV]|[{I|L}S]}GTVVGYETG{I|L}Y;{[TV]|[{I|L}S]}ASVVYADAS{I|L}Y;{[TV]|[{I|L}S]}GTVVYADAS{I|L}Y;{[TV]|[{I|L}S]}EKVYADTG{I|L}Y;{[TV]|[{I|L}S]}ASVVYGETG{I|L}Y 9.1738;9.1612;8.8807;8.8681;8.6285;8.6158;8.6105;8.5978;8.5738;8.4068 -;-;-;-;-;-;-;-;-;- 336503 1 1.94 199732.7 0.8199999928474426 3445 3432 6869 DOHH2_400M_050219_2,6879 DOHH2_400M_050219_2,6879,RCTFNKVTGLY True False VTEKVYADTGLY 37.161261 679.845629870892 19995552.0 6869.0 ENST00000312814.10_1_7:112430370-112430523:-|nuORF 7.703646659851074 2.0 False 12.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6880 37.169 413.0 341870.0 25 0 22886.0 + 24333 MEIGKTETF 9 136 528.2590286073847 0 528.2585327029228 PEAK CID FTMS 0 0 0 6869 170099.484375 0.3602925757740635 -1 0.1099700927734375 11 Unmodified _MEIGKTETF_ ENSG00000139618|ENST00000380152|BRCA2 53.832793166522166 0.0232989711577274 2 E{I|L}GD 4 6 34.769 0.0 0.0 3.2972 0.0 0.0 131.0439547595792 506.2581747288243 637.3021294884036 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 1.1237125054200234 0.0 E{I|L}GD 3.2972 - 521 + 1 1.94 112657.7 1.0 3446 3432 6869 DOHH2_400M_050219_2,6880 DOHH2_400M_050219_2,6880,MEIGKTETF True True MEIGKTETF 37.168638 528.258532702923 2039553.75 6869.0 ENSG00000139618|ENST00000380152|BRCA2 3.294294993082682 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6881 37.182 800.0 163850.0 25 0 9783.8 + -1 ACRRYFYFFYD 11 144 825.3630579147048 1648.7115628962094 2 825.8653442263603 MULTI CID FTMS 0 0 0 6869 162691.703125 1.0 0 0.0 12 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))AC(Carbamidomethyl (C))RRYFYFFYD_ REV__ENSG00000166268|ENST00000552032|MYRFL 0.0 0.8751479354844584 2 {M(Oxidation (M))|F}ADQAGAED 9 -1 69.994 0.0 0.0 4.2454 0.0 0.0 408.1997579221293 333.1317537897094 741.3315117118387 0.0 0.0 0.0 0.0 0 0.5 0.0 0.8441876774005248 1.6989700043360187 {M(Oxidation (M))|F}ADQAGAED 4.2454 - 4021 + 1 1.94 94134.3 0.6899999976158142 3447 3432 6869 DOHH2_400M_050219_2,6881 DOHH2_400M_050219_2,6881,ACRRYFYFFYD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6882 37.188 300.0 242140.0 25 0 17302.0 + 30509 REHDIAIKF 9 104 376.87851829044143 0 376.8767272830009 PEAK CID FTMS 0 0 0 6869 141242.21875 1.0 0 0.0 13 Unmodified _REHDIAIKF_ ENSG00000004897|ENST00000066544|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 13.51866281300042 0.2719089254562534 2 {I|L}CW 3 8 11.972 0.0 0.0 1.5926 0.0 0.0 101.42926450881414 245.11463342838127 346.5438979371954 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}CW 1.5926 - 40 + 1 1.94 67127.4 1.0 3448 3432 6869 DOHH2_400M_050219_2,6882 DOHH2_400M_050219_2,6882,REHDIAIKF False True REHDIAIKF 37.187967 376.876727283001 732244.5625 6869.0 ENSG00000004897|ENST00000066544|CDC27;;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;;nc|ENSG00000004897|P30260-2|CDC27 6.624814987182617 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6883 37.192 117.0 605220.0 25 0 77858.0 + 14366 IEVTPGDRSW 10 73 580.2908278342894 1158.5671027353787 2 580.2911865115166 MULTI CID FTMS 0 0 0 6869 139808.125 0.2497647147228122 -1 0.1099700927734375 14 Unmodified _IEVTPGDRSW_ ENSG00000196684|ENST00000613986|HSH2D;nc|ENSG00000196684|Q96JZ2-2|HSH2D 39.21299971606389 0.1658776112144286 2 {I|L}EVTW[NS]ED 9 6 77.29 0.0 0.0 6.6712 0.0 0.0 0.0 82.0668200128539 82.0668200128539 64.10273743745762 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.8494850021680094 0.4247425010840047 {I|L}EVTW[NS]ED 6.6712 - 469 + 1 1.94 58338.0 1.0 3449 3432 6869 DOHH2_400M_050219_2,6883 DOHH2_400M_050219_2,6883,IEVTPGDRSW False True IEVTPGDRSW 37.19189 580.291186511517 2708647.75 6869.0 nc|ENSG00000196684|Q96JZ2-2|HSH2D;;ENSG00000196684|ENST00000613986|HSH2D 6.368142127990723 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6884 37.201 510.0 216500.0 25 0 28264.0 + 20173 LKRVLNPL 8 105 476.8189890023624 951.6234250715248 2 476.8186523318291 MULTI CID FTMS 0 0 0 6869 106387.8203125 0.7172246099323427 -1 0.1099700927734375 15 Unmodified _LKRVLNPL_ ENSG00000165525|ENST00000298310|NEMF;ENST00000557380.5_1_14:50298948-50312874:-|nuORF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF 30.22481116460888 0.4082965392918993 2 {I|L}P{I|L} 3 5 25.551 0.0 0.0 2.685 0.0 0.0 610.3894350189221 0.0 610.3894350189221 0.0 12.056204968171809 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 {I|L}P{I|L} 2.685 - 66 1 1.94 89455.3 1.0 3450 3432 6869 DOHH2_400M_050219_2,6884 DOHH2_400M_050219_2,6884,LKRVLNPL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6885 37.211 581.0 159100.0 25 0 14133.0 + 16717 KEVEGAEVGW 10 128 552.2718879004889 1102.5292228677777 2 552.2720825076103 MULTI CID FTMS 0 0 0 6869 99047.6015625 1.0 0 0.0 16 Unmodified _KEVEGAEVGW_ ENSG00000167721|ENST00000301364|TSR1 18.373094154950223 0.5392593366289069 2 EEQVKEVGW 9 5 + 53.449 0.0 0.0 4.8478 4.8478 82.879 0.0 0.0 0.0 13.328063752739824 14.09256854528806 13.328063752739824 9.208187539523747 0 0.9247425010840048 1.3979400086720375 0.5941876774005249 0.0 EEQVKEVGW;EE[AG]VKEVGW;EEQVKERW;{NN|[MP]|[D{I|L}]|[EV]}QEKEVGW;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HSKEVGW;{[QN]|[E{I|L}]|[KN]}NEKEVGW;{[CT]|[{M(Oxidation (M))|F}G]}GHSKEVGW;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HSKERW;{[CT]|[{M(Oxidation (M))|F}G]}GHSKERW;{[QN]|[E{I|L}]|[KN]}NEKEVDQ 4.8478;4.0126;3.7345;3.639;3.6079;3.5875;3.5421;3.3333;3.2626;3.2022 -;-;-;-;-;-;-;-;-;- 493 1 1.94 75178.4 1.0 3451 3432 6869 DOHH2_400M_050219_2,6885 DOHH2_400M_050219_2,6885,KEVEGAEVGW False True KEVEGAEVGW 37.211054 552.27208250761 960778.625 6869.0 ENSG00000167721|ENST00000301364|TSR1 3.303314685821533 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6886 37.223 675.0 116780.0 25 0 6679.9 + 2111 APTGGGGGWG 10 131 408.6849277159327 0 408.6848022341728 PEAK CID FTMS 0 0 0 6869 90363.3671875 1.0 0 0.0 17 Unmodified _APTGGGGGWG_ REV__ENST00000524877.5_1_11:61717864-61722837:+|nuORF;REV__ENST00000533521.5_1_11:61719272-61722837:+|nuORF 1.6526216038709556 0.3961065659209837 2 N 1 -1 8.0989 0.0 0.0 0.9933 0.0 0.0 293.17709312542166 405.1175936334594 698.2946867588811 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 N 0.9933 - 10 + 1 1.94 68930.6 1.0 3452 3432 6869 DOHH2_400M_050219_2,6886 DOHH2_400M_050219_2,6886,APTGGGGGWG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6887 37.237 800.0 190300.0 25 0 13022.0 -1 0 133 865.8985985942385 1729.7826442552769 2 866.3993408083916 MULTI CID FTMS 0 0 0 6869 81622.640625 0.264622593911316 -3 0.3383522033691406 18 2 PN{M(Oxidation (M))|F}N{I|L}NADHHT{I|L}A 13 -1 76.582 0.0 0.0 4.4273 0.0 0.0 0.0 282.1096285455688 282.1096285455688 40.841863386659824 0.0 0.0 0.0 0 1.6791746928241125 1.0457574905606752 0.2887254899964357 0.4247425010840047 PN{M(Oxidation (M))|F}N{I|L}NADHHT{I|L}A 4.4273 - 2068 + 1 1.94 104806.1 0.4799999892711639 3453 3432 6869 DOHH2_400M_050219_2,6887 DOHH2_400M_050219_2,6887, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6889 37.243 104.0 345960.0 25 0 32367.0 + 4754 DEIERKFDKW 10 73 455.8981275185981 1364.6725531559944 3 455.8981201052666 MULTI CID FTMS 0 0 0 6888 291748.96875 0.1264379797848033 2 -0.2291069030761718 1 Unmodified _DEIERKFDKW_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 16.565877749689598 0.5695826726197942 2 {I|L}K[WE]D 5 8 22.218 0.0 0.0 1.6281 0.0 0.0 675.3325062482437 0.0 675.3325062482437 0.0 9.030899869919438 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}K[WE]D 1.6281 - 70 1 1.94 37725.2 1.0 3454 3433 6888 DOHH2_400M_050219_2,6889 DOHH2_400M_050219_2,6889,DEIERKFDKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6890 37.251 464.0 160780.0 25 0 16017.0 + 35235 SSDSVGGFRY 10 117 537.7463402989189 1073.4781276646377 2 537.7463256716728 MULTI CID FTMS 0 0 0 6888 84385.296875 0.1227532085137055 2 -0.2291069030761718 2 Unmodified _SSDSVGGFRY_ ENSG00000113282|ENST00000411809|CLINT1;nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1 57.72198328787511 0.0425618229276495 2 {[CA]|SS}DSVG[C(Carbamidomethyl (C))H]{I|L}{I|L} 10 4 + 42.657 0.0 0.0 3.9737 3.9737 70.144 0.0 0.0 0.0 7.269987279362624 1.6925183452537595 1.6925183452537595 1.6925183452537595 0 1.2302046884880935 0.0 0.0 0.0 {[CA]|SS}DSVG[C(Carbamidomethyl (C))H]{I|L}{I|L};{[CA]|SS}DSVY[RN]{M(Oxidation (M))|F};{[CA]|SS}DSR[C(Carbamidomethyl (C))H]{I|L}{I|L};{[CA]|SS}DSYV[RN]{M(Oxidation (M))|F};[MN]MVG[C(Carbamidomethyl (C))H]{I|L}{I|L};[MN]MVY[RN]{M(Oxidation (M))|F};{[CA]|SS}DSV[PS][{I|L}A][DP];{[CA]|SS}DSV[PS]{[CP]|[EA]}[VP];{[CA]|SS}DSV[PS]{NN|[MP]|[D{I|L}]|[EV]}[PA];{[CA]|SS}DSV[PS]{[QN]|[E{I|L}]|[KN]}[PG] 3.9737;3.816;3.3652;2.9271;2.1704;2.0177;1.8864;1.7701;1.7077;1.6291 -;-;-;-;-;-;-;-;-;- 436 + 1 1.94 63169.7 1.0 3455 3433 6888 DOHH2_400M_050219_2,6890 DOHH2_400M_050219_2,6890,SSDSVGGFRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6891 37.252 23.0 3498200.0 25 0 283330.0 + 38188 TPRHIIVRF 9 93 380.2328101140902 1137.6766009424707 3 380.2328369021416 MULTI CID FTMS 0 0 0 6888 2210872.75 0.3214476751641716 -1 0.1220207214355468 3 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 34.221707139014875 0.1071766711162635 2 TPRH{I|L}{I|L}V[R{M(Oxidation (M))|F}] 9 0 + 49.587 0.0 0.0 4.3586 4.3586 72.125 0.0 0.0 0.0 16.478174818886373 2.04628427264403 2.04628427264403 2.04628427264403 0 1.1677353201839438 0.0 0.0 0.3807196863200844 + + TPRH{I|L}{I|L}V[R{M(Oxidation (M))|F}];TPRH{I|L}{I|L}{M(Oxidation (M))|F}[RV];TPRH{I|L}{M(Oxidation (M))|F}{I|L}[RV] 4.3586;4.1788;3.9142 +;-;- + 84 + 1 1.94 69452.5 1.0 3456 3433 6888 DOHH2_400M_050219_2,6891 DOHH2_400M_050219_2,6891,TPRHIIVRF True True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6892 37.254 67.0 1009300.0 25 0 65039.0 + 515 AEHFLEQQM 9 91 566.7579127634774 1131.5012725937547 2 566.7584716677666 MULTI CID FTMS 0 0 0 6888 709486.875 0.5921951492310346 -1 0.1220207214355468 4 Unmodified _AEHFLEQQM_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 58.6788170122104 0.0268135626297836 2 [AG]M[PA]G{I|L}EQQM 11 5 + 63.439 0.0 0.0 5.6067 5.6067 76.694 0.0 0.0 0.0 10.501222959631242 38.99729824914534 10.501222959631242 1.804560644581308 0 0.3252574989159953 1.5228787452803376 0.7302046884880937 0.4247425010840047 [AG]M[PA]G{I|L}EQQM;[AG]M[QP]{I|L}EQQM;[AG]M[PA]VAEQQM;[AG]M[PA]G{I|L}EQ[AG]M;[AG]M[QP]{I|L}EQ[AG]M;[AG]M[QP]{I|L}E[AG]QM;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PA]G{I|L}EQQM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[VA]|[{I|L}G]}G{I|L}EQQM;[AG]M[PA]G{I|L}E[AG]QM;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP]{I|L}EQQM 5.6067;5.4472;4.9189;4.7999;4.6372;4.6372;4.5631;4.4522;4.4245;4.4075 -;-;-;-;-;-;-;-;-;- 496 1 1.94 59061.8 1.0 3457 3433 6888 DOHH2_400M_050219_2,6892 DOHH2_400M_050219_2,6892,AEHFLEQQM True True AEHFLEQQM 37.253722 566.758471667767 7399505.5 6888.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 9.45982837677002 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6893 37.256 102.0 798170.0 25 0 81791.0 + 19772 AVRPKYLL 8 79 480.3054494199701 958.59634590674 2 480.3054382205009 MULTI CID FTMS 0 0 0 6888 579054.4375 1.0 0 0.0 5 Unmodified _LGRLFQLL_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 38.15118350030904 0.2652218139009398 2 {[VA]|[{I|L}G]}R[KP]Y{I|L}{I|L} 8 3 + 44.633 0.0 0.0 4.6561 4.6561 78.874 0.0 0.0 0.0 16.202972028968716 25.29743970546736 16.202972028968716 6.7609125905568135 0 1.2059771852360797 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}R[KP]Y{I|L}{I|L};{[VA]|[{I|L}G]}R[KP]{I|L}Y{I|L} 4.6561;3.9508 -;- 93 1 1.94 68049.2 1.0 3458 3433 6888 DOHH2_400M_050219_2,6893 DOHH2_400M_050219_2,6893,LGRLFQLL False False AVRPKYLL 37.255902 480.305438220501 3906404.75 6888.0 ENSG00000134057|ENST00000256442|CCNB1;;nc|ENSG00000134057|P14635-2|CCNB1 3.3983470598856607 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6894 37.258 106.0 729280.0 25 0 96535.0 + 44123 YLDHNSFDY 9 108 587.2457822928911 1172.4770116525822 2 587.2460204958916 MULTI CID FTMS 0 0 0 6888 519833.8125 0.8816201345006521 -1 0.1220207214355468 6 Unmodified _YLDHNSFDY_ ENSG00000174123|ENST00000308973|TLR10 56.17704186161178 0.0281986971544335 2 [HD]{I|L}YNS{M(Oxidation (M))|F}DY 9 4 + 78.459 0.0 0.0 6.6917 6.6917 91.018 0.0 0.0 0.0 10.231237988471378 16.478174818886373 10.231237988471378 10.231237988471378 0 0.9247425010840048 1.0969100130080565 1.1421590589602533 0.4247425010840047 [HD]{I|L}YNS{M(Oxidation (M))|F}DY;{[YD]|[{M(Oxidation (M))|F}M]}[H{I|L}]NS{M(Oxidation (M))|F}DY;[HD]{I|L}YGGS{M(Oxidation (M))|F}DY;[HD]NS{M(Oxidation (M))|F}D{I|L}YY;[HD]N[Y{I|L}]S{M(Oxidation (M))|F}DY;[HD]NS[Y{I|L}]{M(Oxidation (M))|F}DY;{[YD]|[{M(Oxidation (M))|F}M]}[H{I|L}]GGS{M(Oxidation (M))|F}DY;[HD]NS{M(Oxidation (M))|F}[Y{I|L}]DY;[HD]{I|L}YN{[DA]|[EG]}YY;{[YD]|[{M(Oxidation (M))|F}M]}[H{I|L}]NWYY 6.6917;5.8191;5.5441;5.4247;5.3492;5.267;4.6715;4.5353;4.5301;4.4474 -;-;-;-;-;-;-;-;-;- 433 1 1.94 63633.1 1.0 3459 3433 6888 DOHH2_400M_050219_2,6894 DOHH2_400M_050219_2,6894,YLDHNSFDY True True YLDHNSFDY 37.258168 587.246020495892 4026308.5 6888.0 ENSG00000174123|ENST00000308973|TLR10 7.910738627115886 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6895 37.26 71.0 743290.0 25 0 73282.0 + 24464 MIDPSGVSY 9 96 484.7230712082271 967.4315894832542 2 484.7234374880791 MULTI CID FTMS 0 0 0 6888 465575.5 0.8367242615067153 -1 0.1220207214355468 7 Unmodified _MIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 23.1484247019978 0.2366544122328345 2 [PS]GDVM{I|L}SY 9 6 [PS]GDVM{I|L} + + 24.024 23.495 3.3596 2.4832 2.4832 48.037 0.0 0.0 0.0 0.0 -5.113583918728626 -5.113583918728626 0.0 0 0.0 0.0 0.3054621874040891 0.0 [PS]GDVM{I|L}SY 2.4832 - 138 + 1 1.94 47353.4 1.0 3460 3433 6888 DOHH2_400M_050219_2,6895 DOHH2_400M_050219_2,6895,MIDPSGVSY False True MIDPSGVSY 37.259831 484.723437488079 3922600.5 6888.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 4.005101521809896 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6896 37.263 163.0 1025500.0 25 0 183700.0 + 38191 TPRHIIVRF 9 103 569.8456898327325 1137.676826732265 2 569.8458740115166 MULTI CID FTMS 0 0 0 6888 435517.28125 0.3344612713727775 -1 0.1220207214355468 8 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 57.10758569107544 0.0276834916274374 2 TPRH{I|L}{I|L}V{M(Oxidation (M))|F}R 9 2 + 65.509 0.0 0.0 5.7581 5.7581 77.945 0.0 0.0 0.0 14.092568545288067 2.218487496163569 2.218487496163569 2.218487496163569 0 1.805462187404089 0.0 0.0 1.174742501084005 TPRH{I|L}{I|L}V{M(Oxidation (M))|F}R;TPRH{I|L}{I|L}VR{M(Oxidation (M))|F};TP[H{I|L}]R{I|L}V{M(Oxidation (M))|F}R;TP[H{I|L}]R{I|L}VR{M(Oxidation (M))|F} 5.7581;5.5631;3.4059;3.2109 -;+;-;- + 253 + 1 1.94 129311.4 1.0 3461 3433 6888 DOHH2_400M_050219_2,6896 DOHH2_400M_050219_2,6896,TPRHIIVRF True True TPRHIIVRF 37.263039 569.845874011517 168676902.0 6888.0 nc|ENSG1000|Q9UN81|L1_ORF1 6.708158651987712 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6897 37.266 139.0 836850.0 25 0 153450.0 + 44008 YIDSKFEDY 9 93 590.264381771695 1178.5142106101898 2 590.2638427615166 MULTI CID FTMS 0 0 0 6888 398235.40625 0.2658152521303337 -1 0.1220207214355468 9 Unmodified _YIDSKFEDY_ ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000398921.6_1_7:45788229-45798731:-|nuORF;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;ENST00000428867.1_1_7:45797631-45798728:-|nuORF;ENST00000429741.5_1_7:45796578-45798731:-|nuORF;ENST00000449219.2_1_1:224190265-224197055:+|nuORF;ENST00000473201.1_1_7:35903172-35913395:+|nuORF;ENST00000475109.5_1_7:35903172-35919218:+|nuORF;ENST00000489259.5_1_10:38674311-38691690:-|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7 49.55428908609986 0.0413471690215031 2 Y{I|L}DSK[{M(Oxidation (M))|F}E]DY 9 0 + 81.966 0.0 0.0 6.955 6.955 85.394 0.0 0.0 0.0 41.69978440589176 4.74448558440487 4.74448558440487 5.300084529637985 0 1.1861818737241734 2.0 0.805462187404089 0.4247425010840047 + + Y{I|L}DSK[{M(Oxidation (M))|F}E]DY;[Y{I|L}]DQSDY{I|L}Y;[Y{I|L}]DQSD{I|L}YY;Y{I|L}D[HK][EP]DY;[Y{I|L}]D[AG]SDY{I|L}Y;[Y{I|L}][NS]EDY{I|L}Y;[Y{I|L}]D[AG]SD{I|L}YY;[Y{I|L}][NS]ED{I|L}YY;[Y{I|L}]DQS{I|L}DYY;Y{I|L}D[Y{M(Oxidation (M))|F}]{[QV]|[N{I|L}]|[RA]|[KV]}[MT] 6.955;6.5053;6.3559;5.9808;5.7239;5.6167;5.5745;5.4673;5.4397;5.1546 +;-;-;-;-;-;-;-;-;- + 734 + 1 1.94 92756.6 1.0 3462 3433 6888 DOHH2_400M_050219_2,6897 DOHH2_400M_050219_2,6897,YIDSKFEDY True True YIDSKFEDY 37.265854 590.263842761517 10944476.0 6888.0 ENST00000429741.5_1_7:45796578-45798731:-|nuORF;;ENST00000428867.1_1_7:45797631-45798728:-|nuORF;;ENSG00000122545|ENST00000350320|SEPTIN7;;ENST00000473201.1_1_7:35903172-35913395:+|nuORF;;ENST00000489259.5_1_10:38674311-38691690:-|nuORF;;ENST00000398921.6_1_7:45788229-45798731:-|nuORF;;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;;ENST00000475109.5_1_7:35903172-35919218:+|nuORF;;nc|ENSG00000122545|Q16181-2|SEPTIN7;;ENST00000449219.2_1_1:224190265-224197055:+|nuORF 5.503377755482991 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6898 37.28 800.0 221050.0 25 0 13499.0 + 30547 REMNPNYTEF 10 151 650.7843117524664 1299.5540705717326 2 650.7849609255791 MULTI CID FTMS 0 0 0 6888 197932.515625 1.0 0 0.0 10 Unmodified _REMNPNYTEF_ ENSG00000082701|ENST00000264235|GSK3B;ENSG00000105723|ENST00000222330|GSK3A;nc|ENSG00000082701|P49841-2|GSK3B 77.04852534044906 0.0187095815199658 2 {[ET]|[MV]}VSNPNYTE{M(Oxidation (M))|F} 11 3 + 82.937 0.0 0.0 6.382 6.382 79.847 0.0 0.0 0.0 2.200919170682994 16.57577319177794 2.200919170682994 2.200919170682994 0 2.091129063296272 0.0 1.0044321917401078 1.0 {[ET]|[MV]}VSNPNYTE{M(Oxidation (M))|F};{[RE]|[WV]}MNPNYTE{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}[DV]NPNYTE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}SSNPNYTE{M(Oxidation (M))|F};{[ET]|[MV]}VSNPGGYTE{M(Oxidation (M))|F};{[RE]|[WV]}MNPGGYTE{M(Oxidation (M))|F};{[RE]|[WV]}MGGPNYTE{M(Oxidation (M))|F};{[ET]|[MV]}VSGGPNYTE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))Q]PNYTE{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}[DV]NPGGYTE{M(Oxidation (M))|F} 6.382;6.2126;5.8529;5.7077;5.6796;5.5074;5.5074;5.4293;5.1884;5.1505 -;+;-;-;-;-;-;-;-;- + 4142 1 1.94 129362.2 0.8100000023841858 3463 3433 6888 DOHH2_400M_050219_2,6898 DOHH2_400M_050219_2,6898,REMNPNYTEF True True REMNPNYTEF 37.279691 650.784960925579 1060284.375 6888.0 nc|ENSG00000082701|P49841-2|GSK3B;;ENSG00000082701|ENST00000264235|GSK3B;;ENSG00000105723|ENST00000222330|GSK3A 8.471292495727539 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6899 37.283 183.0 429870.0 25 0 47245.0 + 29623 QMDPSSNFY 9 114 544.7209405949518 1087.4273282567035 2 544.7216064333916 MULTI CID FTMS 0 0 0 6888 177275.484375 0.4113498471292169 -1 0.1220207214355468 11 Unmodified _QMDPSSNFY_ ENSG00000138670|ENST00000264400|RASGEF1B;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B 21.74664581756881 0.2544899275067181 2 {M(Oxidation (M))|F}Y 2 7 22.959 0.0 0.0 2.1113 0.0 0.0 759.2850139362865 0.0 759.2850139362865 0.0 12.121344736971931 0.0 0.0 0 0.5 0.0 0.0 0.0 + {M(Oxidation (M))|F}Y 2.1113 + + 339 + 1 1.94 63631.7 1.0 3464 3433 6888 DOHH2_400M_050219_2,6899 DOHH2_400M_050219_2,6899,QMDPSSNFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6900 37.289 336.0 172110.0 25 0 21325.0 41591 VPPKVTTT 8 104 421.7511096353617 841.4876663375235 2 421.7512695193291 MULTI CID FTMS 0 0 0 6888 172933.0625 0.7516190988950481 -4 0.4603729248046875 12 Unmodified _VPPKVTTT_ ENSG00000113249|ENST00000523175|HAVCR1 2.577480529830294 0.808687252328423 2 Y 1 8 11.99 0.0 0.0 1.4248 0.0 0.0 660.4133845765845 0.0 660.4133845765845 0.0 2.525749891599532 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4248 - 14 + 1 1.94 54654.0 1.0 3465 3433 6888 DOHH2_400M_050219_2,6900 DOHH2_400M_050219_2,6900,VPPKVTTT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6901 37.296 373.0 263430.0 25 0 72139.0 + 10314 FSDKELAAY 9 113 522.2547927987088 1042.4950326642174 2 522.2555419802666 MULTI CID FTMS 0 0 0 6888 163980.59375 1.0 0 0.0 13 Unmodified _FSDKELAAY_ ENSG00000005471|ENST00000649586|ABCB4;nc|ENSG00000005471|P21439-3|ABCB4;nc|ENSG00000005471|P21439|ABCB4 27.628801355627647 0.1796483985696185 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WW{I|L}AAY 8 3 + 54.922 0.0 0.0 5.2683 5.2683 76.933 0.0 0.0 0.0 7.513443482296758 16.40978057358332 7.513443482296758 3.0102999566398125 0 0.9247425010840048 1.3010299956639813 0.4247425010840047 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WW{I|L}AAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WWA{I|L}AY;{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]C{I|L}AAY;{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]CA{I|L}AY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}C{I|L}AAY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}CA{I|L}AY;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]{[YD]|[{M(Oxidation (M))|F}M]}AAY;{NN|[MP]|[D{I|L}]|[EV]}[RH][TP]AAY;[TA]A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}C{I|L}AAY;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T][WY]AY 5.2683;4.9795;4.5476;4.2588;4.2054;3.9167;3.8205;3.7702;3.3058;3.1991 -;-;-;-;-;-;-;-;-;- 564 1 1.94 80384.3 1.0 3466 3433 6888 DOHH2_400M_050219_2,6901 DOHH2_400M_050219_2,6901,FSDKELAAY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6902 37.302 287.0 383120.0 25 0 20304.0 + + -1 RMNSKIMSL 9 129 540.2885568709584 1078.5625608087166 2 540.2885009646416 MULTI CID FTMS 0 0 0 6888 155751.09375 0.6878442733709115 -1 0.1220207214355468 14 Carbamidomethyl (C) _C(Carbamidomethyl (C))MVIILMSL_ ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2 42.09456458481378 0.0639583784996157 2 {[MS]|[{M(Oxidation (M))|F}A]}[RN]K{I|L}MS{I|L} 9 -1 + 54.069 0.0 0.0 5.013 5.013 74.983 0.0 0.0 0.0 5.406075122407685 9.300850554378442 5.406075122407685 2.218487496163561 0 1.2302046884880935 0.9208187539523752 0.5 0.4247425010840047 {[MS]|[{M(Oxidation (M))|F}A]}[RN]K{I|L}MS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[RE]|[WV]}{I|L}MS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{[RE]|[WV]}{I|L}MS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[RN]K{I|L}SM{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[RE]|[WV]}{I|L}SM{I|L};{[MS]|[{M(Oxidation (M))|F}A]}M[HK]V{M(Oxidation (M))|F}S{I|L};[VP][YE]K{I|L}MS{I|L};{[TV]|[{I|L}S]}[NS]SK{I|L}MS{I|L};{[TV]|[{I|L}S]}M{[RE]|[WV]}{I|L}MS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{[RE]|[WV]}{I|L}SM{I|L} 5.013;4.8073;4.5118;4.4821;4.2764;4.1507;4.0859;4.0238;3.996;3.9808 -;-;-;-;-;-;-;-;-;- 800 1 1.94 87051.4 1.0 3467 3433 6888 DOHH2_400M_050219_2,6902 DOHH2_400M_050219_2,6902,CMVIILMSL False False RMNSKIMSL 37.302489 540.288500964642 1337747.75 6888.0 ENSG00000138346|ENST00000358410|DNA2;;nc|ENSG00000138346|P51530-4|DNA2 5.141258239746094 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6903 37.307 235.0 260390.0 25 0 25140.0 + 25358 NATIRNVL 8 105 450.7668416023026 0 450.7664672732353 PEAK CID FTMS 0 0 0 6888 130761.3203125 1.0 0 0.0 15 Unmodified _NATIRNVL_ ENSG00000241973|ENST00000255882|PI4KA;ENST00000360806.9_2_22:21827645-21842641:-|nuORF;ENST00000450651.5_1_22:21841260-21846319:-|nuORF;ENST00000462560.6_1_22:21830876-21842641:-|nuORF;ENST00000467443.5_1_22:21831964-21846319:-|nuORF;nc|ENSG00000183506|A4QPH2-2|PI4KAP2;nc|ENSG00000183506|A4QPH2-4|PI4KAP2;nc|ENSG00000183506|A4QPH2|PI4KAP2;nc|ENSG00000241973|P42356-2|PI4KA;nc|ENSG00000290425|Q8N8J0|PI4KAP1 20.453626601364224 0.4093984001168845 2 T{I|L}QA{I|L}G 6 6 12.057 0.0 0.0 1.3404 0.0 0.0 185.08033050712737 128.0721377008422 313.1524682079696 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 T{I|L}QA{I|L}G 1.3404 - 84 + 1 1.94 51485.8 1.0 3468 3433 6888 DOHH2_400M_050219_2,6903 DOHH2_400M_050219_2,6903,NATIRNVL False True NATIRNVL 37.306893 450.766467273235 557623.1875 6888.0 ENST00000467443.5_1_22:21831964-21846319:-|nuORF;;nc|ENSG00000183506|A4QPH2|PI4KAP2;;ENSG00000241973|ENST00000255882|PI4KA;;nc|ENSG00000241973|P42356-2|PI4KA;;ENST00000360806.9_2_22:21827645-21842641:-|nuORF;;ENST00000450651.5_1_22:21841260-21846319:-|nuORF;;nc|ENSG00000290425|Q8N8J0|PI4KAP1;;nc|ENSG00000183506|A4QPH2-2|PI4KAP2;;nc|ENSG00000183506|A4QPH2-4|PI4KAP2;;ENST00000462560.6_1_22:21830876-21842641:-|nuORF 0.0565098921457926 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6904 37.309 126.0 386230.0 25 0 51690.0 43366 WPSLITSLT 9 96 509.2837925312741 0 509.2827026247978 PEAK CID FTMS 0 0 0 6888 125827.0078125 1.0 0 0.0 16 Unmodified _WPSLITSLT_ ENST00000280663.12_1_12:1902823-1909126:-|nuORF 11.640296217721598 0.2934555500198502 2 YA{I|L}R 4 8 15.662 0.0 0.0 1.5407 0.0 0.0 186.12891211157324 324.13154016666255 510.2604522782358 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YA{I|L}R 1.5407 - 63 + 1 1.94 41004.0 1.0 3469 3433 6888 DOHH2_400M_050219_2,6904 DOHH2_400M_050219_2,6904,WPSLITSLT False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6905 37.323 800.0 136630.0 25 0 14406.0 + 10321 FSDSESADSLY 11 142 610.7513205951213 1219.4880882570426 2 610.7521240115166 MULTI CID FTMS 0 0 0 6888 99483.8984375 0.8961707273233728 -1 0.1220207214355468 17 Unmodified _FSDSESADSLY_ ENSG00000102760|ENST00000379359|RGCC;nc|ENSG00000102760|Q9H4X1-2|RGCC 88.95385435242217 0.0009976987138062 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSESADS{I|L}Y 11 0 + 44.905 0.0 0.0 3.6823 3.6823 71.586 0.0 0.0 0.0 6.640359271405735 9.797513843253569 6.640359271405735 3.39327001161859 0 0.7742275032520141 1.0457574905606752 2.396591250700361 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSESADS{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSESWS{I|L}Y;{[DS]|[MA]|[CV]|TT}AYESADS{I|L}Y;{[ES]|[DT]|[{I|L}C]}GYESADS{I|L}Y;{[DA]|[EG]}SYESADS{I|L}Y;{[DS]|[MA]|[CV]|TT}AYESWS{I|L}Y;[YE]GSESADS{I|L}Y;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}SESADS{I|L}Y;{[ES]|[DT]|[{I|L}C]}GYESWS{I|L}Y;{[DA]|[EG]}SYESWS{I|L}Y 3.6823;3.404;3.1377;3.0582;2.9205;2.8595;2.8488;2.8293;2.7799;2.6423 +;-;-;-;-;-;-;-;-;- + 674 1 1.94 82818.4 0.5199999809265137 3470 3433 6888 DOHH2_400M_050219_2,6905 DOHH2_400M_050219_2,6905,FSDSESADSLY True True FSDSESADSLY 37.32332 610.752124011517 1012903.375 6888.0 ENSG00000102760|ENST00000379359|RGCC;;nc|ENSG00000102760|Q9H4X1-2|RGCC 6.2452324231465655 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6906 37.325 84.0 776840.0 25 0 279150.0 -1 0 60 398.23009292118985 397.22281645458986 1 398.2298461794853 MULTI CID FTMS 0 0 0 6888 619278.75 1.0 0 0.0 18 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.94 57913.9 1.0 3471 3433 6888 DOHH2_400M_050219_2,6906 DOHH2_400M_050219_2,6906, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6907 37.333 377.0 254270.0 25 0 52948.0 + 4795 DENPNANLL 9 131 500.2406966635492 998.4668403938985 2 500.2412597537041 MULTI CID FTMS 0 0 0 6888 181433.375 1.0 0 0.0 19 Unmodified _DENPNANLL_ ENSG00000105063|ENST00000412770|PPP6R1;ENST00000586690.1_1_19:55748009-55750864:-|nuORF 14.838274106304384 0.4350285940865338 2 {I|L} 1 8 15.485 0.0 0.0 1.5508 0.0 0.0 867.3717456446781 0.0 867.3717456446781 0.0 6.662192299578024 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5508 + + 157 + 1 1.94 77227.2 1.0 3472 3433 6888 DOHH2_400M_050219_2,6907 DOHH2_400M_050219_2,6907,DENPNANLL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6908 37.347 800.0 178180.0 25 0 14610.0 + 28441 PTDGPPNSFY 10 152 547.7428810432775 1093.471209153355 2 547.7430908083916 MULTI CID FTMS 0 0 0 6888 130480.46875 1.0 0 0.0 20 Unmodified _PTDGPPNSFY_ ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11 32.78568957990786 0.2337485590374503 2 {[DA]|[EG]}AAS[NP]QGTY 11 8 {[DA]|[EG]}AA + + 32.924 3.4795 1.0604 3.011 3.011 48.879 0.0 0.0 0.0 0.0 20.44994474394521 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 {[DA]|[EG]}AAS[NP]QGTY 3.011 - 990 + 1 1.94 112502.7 0.5600000023841858 3473 3433 6888 DOHH2_400M_050219_2,6908 DOHH2_400M_050219_2,6908,PTDGPPNSFY False True PTDGPPNSFY 37.346976 547.743090808392 1013396.3125 6888.0 nc|ENSG00000072803|Q9UKB1-2|FBXW11;;nc|ENSG00000072803|Q9UKB1-3|FBXW11;;nc|ENSG00000072803|Q9UKB1|FBXW11;;ENSG00000072803|ENST00000517395|FBXW11 2.8047566413879395 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6910 37.352 89.0 596750.0 25 0 61624.0 + 44264 YLKVKGNVF 9 82 534.3160450899084 1066.6175372466166 2 534.3160888552666 MULTI CID FTMS 0 0 0 6909 391934.4375 0.2175314061470394 2 -0.2168121337890625 1 Unmodified _YLKVKGNVF_ ENSG00000108298|ENST00000225430|RPL19;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;ENST00000429272.1_1_2:131051524-131051887:+|nuORF;ENST00000472309.1_1_4:179208113-179208287:+|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 34.10243960390752 0.1078313939113124 2 Y{I|L}KV[W{I|L}]V{M(Oxidation (M))|F} 8 3 + 57.16 0.0 0.0 5.359 5.359 90.271 0.0 0.0 0.0 40.97418457616534 8.499934467764874 8.499934467764874 57.159809847166514 0 0.805462187404089 2.0 0.0 0.0 Y{I|L}KV[W{I|L}]V{M(Oxidation (M))|F} 5.359 - 164 + 1 1.94 45410.4 1.0 3474 3434 6909 DOHH2_400M_050219_2,6910 DOHH2_400M_050219_2,6910,YLKVKGNVF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6911 37.354 99.0 486300.0 25 0 73032.0 + 10933 GAKRHSGL 8 100 413.238996635502 824.463440337804 2 413.2382690310478 MULTI CID FTMS 0 0 0 6909 460375.4375 0.9710091558325186 -2 0.2322921752929687 2 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 2.302733041254933 0.8103549651115762 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.94 44141.5 1.0 3475 3434 6909 DOHH2_400M_050219_2,6911 DOHH2_400M_050219_2,6911,GAKRHSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6912 37.357 170.0 284990.0 25 0 16547.0 + 2692 ATEDPWKTNY 10 89 612.7801090649566 1223.5456651967131 2 612.7803222537041 MULTI CID FTMS 0 0 0 6909 289535.65625 0.0097054725436663 16 -1.328033447265625 3 Unmodified _ATEDPWKTNY_ ENSG00000139684|ENST00000378720|ESD 55.50274090549119 0.048383292844968 2 [WP]KD[PS]PD 8 8 46.577 0.0 0.0 3.8067 0.0 0.0 0.0 298.1053935504819 298.1053935504819 20.361753205006607 0.0 0.0 0.0 0 0.566901560044258 1.5228787452803376 0.3807196863200844 0.4247425010840047 [WP]KD[PS]PD 3.8067 - 349 1 1.94 42551.7 1.0 3476 3434 6909 DOHH2_400M_050219_2,6912 DOHH2_400M_050219_2,6912,ATEDPWKTNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6913 37.36 127.0 390230.0 25 0 56931.0 + 4453 DAYALNHTL 9 91 509.2538726359954 0 509.2537414431572 PEAK CID FTMS 0 0 0 6909 245864.515625 1.0 0 0.0 4 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 60.07390631473393 0.0167981024283326 2 YA{I|L}N 4 5 23.034 0.0 0.0 2.266 0.0 0.0 186.06364019210963 366.17868982486567 552.2423300169753 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 + YA{I|L}N 2.266 + + 42 + 1 1.94 43514.8 1.0 3477 3434 6909 DOHH2_400M_050219_2,6913 DOHH2_400M_050219_2,6913,DAYALNHTL True True DAYALNHTL 37.359759 509.253741443157 3060255.25 6909.0 ENSG00000110777|ENST00000393067|POU2AF1 8.1104154586792 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6914 37.374 800.0 235330.0 25 0 13423.0 + 15285 IPIMALILI 9 157 498.8316458597671 995.6487387863342 2 498.8316833376884 MULTI CID FTMS 0 0 0 6909 180162.09375 0.2210716007173761 2 -0.2168121337890625 5 Unmodified _IPIMALILI_ REV__ENSG00000198727|ENST00000361789|MT-CYB 45.7499826716795 0.0496882803020414 2 {I|L}{I|L}TV{I|L}A{I|L} 7 -1 37.555 0.0 0.0 3.7719 0.0 0.0 254.16320998359527 0.0 254.16320998359527 0.0 26.29620391657209 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L}{I|L}TV{I|L}A{I|L} 3.7719 - 360 1 1.94 145900.8 0.6800000071525574 3478 3434 6909 DOHH2_400M_050219_2,6914 DOHH2_400M_050219_2,6914,IPIMALILI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6915 37.387 800.0 159540.0 25 0 11728.0 -1 0 110 881.9119343069236 1761.8093156806472 2 881.9131957888603 MULTI CID FTMS 0 0 0 6909 167841.328125 0.6780958803029242 1 -0.11883544921875 6 2 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQG[KQ]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 15 -1 + 74.096 0.0 0.0 4.2057 4.2057 83.287 0.0 0.0 0.0 49.52607112299283 3.65279269351241 3.65279269351241 15.848396689760094 0 1.25 0.0 0.3252574989159953 1.2302046884880935 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQG[KQ]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}[VG]GQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}AAAQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[QP]AQAEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}NEA{[QN]|[E{I|L}]|[KN]}[DV]{M(Oxidation (M))|F}{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N[QP]AE[KC]{M(Oxidation (M))|F}{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N[QP]AE{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N[QP]AQ[MT]{M(Oxidation (M))|F}{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N[QP]AE{[CA]|SS}G{M(Oxidation (M))|F}{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.2057;3.3061;2.9253;2.9094;2.8164;2.097;1.8534;1.8534;1.7825;1.7546 -;-;-;-;-;-;-;-;-;- 1517 + 1 1.94 91510.7 0.7200000286102295 3479 3434 6909 DOHH2_400M_050219_2,6915 DOHH2_400M_050219_2,6915, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6916 37.393 324.0 159040.0 25 0 16359.0 + 11578 GKKVWIGI 8 88 450.7849741702822 899.5553954073645 2 450.7848388552666 MULTI CID FTMS 0 0 0 6909 139242.6875 0.1761313097829399 3 -0.2971343994140625 7 Unmodified _GKKVWIGI_ ENSG00000073969|ENST00000398238|NSF;nc|ENSG00000073969|P46459-2|NSF 26.34127834903884 0.4900704351052977 2 A{I|L}G{I|L} 4 5 29.641 0.0 0.0 3.2951 0.0 0.0 527.3106271962301 0.0 527.3106271962301 0.0 19.18366291575822 0.0 0.0 0 1.0 0.0 0.0 0.0 A{I|L}G{I|L} 3.2951 - 80 + 1 1.94 47819.6 1.0 3480 3434 6909 DOHH2_400M_050219_2,6916 DOHH2_400M_050219_2,6916,GKKVWIGI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6917 37.407 800.0 141740.0 25 0 12784.0 -1 MLKEDDMFKDF 11 131 725.8148137191175 1449.615074505035 2 725.8149902224541 MULTI CID FTMS 0 0 0 6909 126659.2734375 1.0 0 0.0 8 2 Oxidation (M) _M(Oxidation (M))LKEDDM(Oxidation (M))FKDF_ ENSG00000110841|ENST00000228425|PPFIBP1;nc|ENSG00000110841|Q86W92-3|PPFIBP1;nc|ENSG00000110841|Q86W92-4|PPFIBP1;nc|ENSG00000110841|Q86W92|PPFIBP1 20.41453444215458 0.6105011870913812 2 [HD]EAQQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 12 -1 + 74.338 0.0 0.0 5.1281 5.1281 77.476 0.0 0.0 0.0 3.556518697048716 57.97018612667812 3.556518697048716 3.679767852945943 0 0.6989700043360187 0.0 1.024227503252014 0.805462187404089 [HD]EAQQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[HD]EAQQW{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[AG]Y{[QC]|[C(Carbamidomethyl (C))A]}WDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[HD]EA[AG]QDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQW{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQ[AG]DA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HA[AG]QDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[YQ]{[QC]|[C(Carbamidomethyl (C))A]}WDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 5.1281;4.8743;4.672;4.5917;4.5005;4.5005;4.4182;4.2466;4.2466;4.2092 -;-;-;-;-;-;-;-;-;- 1113 1 1.94 83789.9 0.6399999856948853 3481 3434 6909 DOHH2_400M_050219_2,6917 DOHH2_400M_050219_2,6917,MLKEDDMFKDF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6918 37.413 341.0 357570.0 25 0 65731.0 + 5996 DRNIRYVAL 9 128 560.3173591116689 1118.6201652901375 2 560.3173095583916 MULTI CID FTMS 0 0 0 6909 123001.65625 0.8343347441158836 -1 0.1102714538574218 9 Unmodified _DRNIRYVAL_ ENSG00000213983|ENST00000397120|AP1G2;ENST00000535852.6_1_14:24028960-24035624:-|nuORF 32.78568957990786 0.1150597335874693 2 DRN{I|L} 4 5 32.528 0.0 0.0 2.9079 0.0 0.0 0.0 617.3426607721311 617.3426607721311 1.4603757650552716 0.0 0.0 0.0 0 0.6989700043360187 0.6777807052660807 0.0 0.0 + DRN{I|L} 2.9079 + + 551 + 1 1.94 97193.1 1.0 3482 3434 6909 DOHH2_400M_050219_2,6918 DOHH2_400M_050219_2,6918,DRNIRYVAL True True DRNIRYVAL 37.41332 560.317309558392 1123417.375 6909.0 ENSG00000213983|ENST00000397120|AP1G2;;ENST00000535852.6_1_14:24028960-24035624:-|nuORF 7.010985851287842 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6919 37.424 564.0 213980.0 25 0 13320.0 + 24465 MIDPSGVSY 9 144 492.72100109588143 0 492.7210265994072 PEAK CID FTMS 0 0 0 6909 116326.1171875 1.0 0 0.0 10 Oxidation (M) _M(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 44.40701690623563 0.0469661192146891 2 S 1 8 13.539 0.0 0.0 1.3767 0.0 0.0 715.321174653337 178.05140100650627 893.3725756598433 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 + S 1.3767 + + 125 + 1 1.94 95415.1 1.0 3483 3434 6909 DOHH2_400M_050219_2,6919 DOHH2_400M_050219_2,6919,MIDPSGVSY True False MIDPSGVSY 37.424374 492.721026599407 1408985.125 6909.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 5.4696574211120605 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6920 37.429 253.0 318400.0 25 0 17016.0 32771 SEDRTVRVW 9 122 383.2006185826977 1146.5800263482931 3 383.1979858279228 MULTI CID FTMS 0 0 0 6909 99722.9609375 0.1738637413679289 3 -0.2971343994140625 11 Unmodified _SEDRTVRVW_ ENSG00000139668|ENST00000298125|WDFY2 17.11289562659939 0.3734572693229295 2 SEDR 4 5 50.79 0.0 0.0 4.4297 0.0 0.0 0.0 656.3556002252561 656.3556002252561 36.81031895404267 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 + SEDR 4.4297 + + 61 + 1 1.94 68570.7 1.0 3484 3434 6909 DOHH2_400M_050219_2,6920 DOHH2_400M_050219_2,6920,SEDRTVRVW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6921 37.443 800.0 91176.0 25 0 9524.6 + 4757 DEIERKFDKW 10 95 683.3435848662751 1364.6726167993502 2 683.3433715701103 MULTI CID FTMS 0 0 0 6909 89015.921875 0.1855087628420512 3 -0.2971343994140625 12 Unmodified _DEIERKFDKW_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 39.41278653710922 0.1637679073694847 2 S{M(Oxidation (M))|F}DKW 5 6 47.123 0.0 0.0 3.453 0.0 0.0 683.3641224591812 0.0 683.3641224591812 0.0 20.75257498915996 0.0 0.0 0 0.6861818737241735 0.0 0.3807196863200844 0.0 S{M(Oxidation (M))|F}DKW 3.453 - 300 1 1.94 55605.8 0.4699999988079071 3485 3434 6909 DOHH2_400M_050219_2,6921 DOHH2_400M_050219_2,6921,DEIERKFDKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6922 37.453 565.0 234220.0 25 0 17320.0 + 24326 MEFERQAEI 9 153 576.770366175929 0 576.7698242068291 PEAK CID FTMS 0 0 0 6909 132065.15625 1.0 0 0.0 13 Unmodified _MEFERQAEI_ ENSG00000130724|ENST00000312547|CHMP2A 34.93206674587334 0.0866320009191956 2 E[C(Carbamidomethyl (C))R]DH 5 7 11.655 0.0 0.0 1.0122 0.0 0.0 131.0446863540079 320.1980990045532 451.242785358561 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.3494850021680094 0.3054621874040891 E[C(Carbamidomethyl (C))R]DH 1.0122 - 174 + 1 1.94 102298.2 1.0 3486 3434 6909 DOHH2_400M_050219_2,6922 DOHH2_400M_050219_2,6922,MEFERQAEI True True MEFERQAEI 37.452822 576.769824206829 481922.25 6909.0 ENSG00000130724|ENST00000312547|CHMP2A 0.4035165508588155 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6923 37.466 673.0 136910.0 25 0 11225.0 + 37968 TMRTAFVLY 9 142 551.28937431452 1100.56419569584 2 551.7909423708916 MULTI CID FTMS 0 0 0 6909 115293.046875 0.9954917391949 1 -0.11883544921875 14 Unmodified _TMRTAFVLY_ REV__ENSG00000158079|ENST00000620992|PTPDC1;REV__nc|ENSG00000158079|A2A3K4-2|PTPDC1;REV__nc|ENSG00000158079|A2A3K4|PTPDC1 13.50788311687929 0.4710407108020397 2 Y 1 -1 15.485 0.0 0.0 1.407 0.0 0.0 919.4898834173227 0.0 919.4898834173227 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.407 + + 388 + 1 1.94 71534.2 1.0 3487 3434 6909 DOHH2_400M_050219_2,6923 DOHH2_400M_050219_2,6923,TMRTAFVLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6925 37.471 67.0 725890.0 25 0 60697.0 + 22612 LPYIKQEV 8 82 495.2868510389953 988.5591491447906 2 495.2870361208916 MULTI CID FTMS 0 0 0 6924 584237.8125 0.4371464069772042 2 -0.1782989501953125 1 Unmodified _LPYIKQEV_ ENSG00000047315|ENST00000314595|POLR2B 43.85829265575387 0.1697421968005898 2 {I|L}PY{I|L}K 5 3 61.044 0.0 0.0 6.1751 0.0 0.0 0.0 371.1569918268188 371.1569918268188 33.596981436199016 0.0 0.0 0.0 0 1.086696871556164 1.5228787452803376 0.0 0.0 + {I|L}PY{I|L}K 6.1751 + + 178 + 1 1.94 41584.5 1.0 3488 3435 6924 DOHH2_400M_050219_2,6925 DOHH2_400M_050219_2,6925,LPYIKQEV False True LPYIKQEV 37.47069 495.287036120892 25703406.0 6924.0 ENSG00000047315|ENST00000314595|POLR2B 5.777544498443604 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6926 37.473 99.0 466780.0 25 0 55141.0 1013 AGADHIITM 9 83 464.7315390040196 927.4485250748392 2 464.7315856814384 MULTI CID FTMS 0 0 0 6924 460483.3125 0.0730489164692251 4 -0.348358154296875 2 Unmodified _AGADHIITM_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 28.486842064014134 0.1687311288560894 2 [HD]AQ{I|L}{I|L}TM 8 4 + 36.56 0.0 0.0 3.942 3.942 73.541 0.0 0.0 0.0 3.098943791441968 16.42667503568731 3.098943791441968 4.313637641589871 0 0.8935078169319297 0.0 0.0 0.0 [HD]AQ{I|L}{I|L}TM;[HD]A{I|L}GA{I|L}TM;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[WK]TM;[HD]A{I|L}Q{I|L}TM;[H{I|L}]DAGA{I|L}TM;[HD]{I|L}AGA{I|L}TM;[H{I|L}]DQA{I|L}TM;[HD]{I|L}QA{I|L}TM;[H{I|L}]DAQ{I|L}TM;[HD]{I|L}AQ{I|L}TM 3.942;3.4769;3.4221;3.2928;3.1523;3.1523;3.1029;3.1029;2.9682;2.9682 -;-;-;-;-;-;-;-;-;- 241 1 1.94 42622.9 1.0 3489 3435 6924 DOHH2_400M_050219_2,6926 DOHH2_400M_050219_2,6926,AGADHIITM False True NHAAGILTM 37.472827 464.731585681438 0.0 6924.0 ENSG00000161610|ENST00000293330|HCRT 2.12590491771698 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6927 37.474 45.0 1289500.0 25 0 181240.0 + 25892 NLIQKSESF 9 85 533.2826097125482 1064.5506664918962 2 533.2827636599541 MULTI CID FTMS 0 0 0 6924 1067301.875 1.0 0 0.0 3 Unmodified _NLIQKSESF_ ENSG00000117724|ENST00000366955|CENPF 41.8396318013385 0.0653578398400075 2 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q 4 5 49.693 0.0 0.0 4.668 0.0 0.0 0.0 593.258444102961 593.258444102961 17.974833468734275 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.4247425010840047 + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q 4.668 + + 133 + 1 1.94 49155.3 1.0 3490 3435 6924 DOHH2_400M_050219_2,6927 DOHH2_400M_050219_2,6927,NLIQKSESF True True NLIQKSESF 37.474069 533.282763659954 5032395.5 6924.0 ENSG00000117724|ENST00000366955|CENPF 5.257313887278239 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6928 37.476 97.0 563410.0 25 0 80856.0 -1 KFLTYGQHCEW 11 91 504.2300433103397 1509.668300531219 3 504.2303649783134 MULTI CID FTMS 0 0 0 6924 395003.8125 1.0 0 0.0 4 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))KFLTYGQHC(Carbamidomethyl (C))EW_ RMND5B|p.R27W|1|0.33|ENSG00000145916|chr5:178138198-178138198|C/T|missense_variant 4.406150317652783 0.8543594311449257 2 {[DA]|[EG]}HVPV[WD]E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W 12 -1 + 27.278 0.0 0.0 1.8069 1.8069 73.367 0.0 0.0 0.0 3.861687672771481 8.131455692823831 3.861687672771481 8.550014694627311 0 0.4247425010840047 1.0969100130080565 0.0 0.0 {[DA]|[EG]}HVPV[WD]E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W;{[RE]|[WV]}HPV[WD]E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W 1.8069;1.2405 -;- 268 1 1.94 48183.0 1.0 3491 3435 6924 DOHH2_400M_050219_2,6928 DOHH2_400M_050219_2,6928,KFLTYGQHCEW False False False False variant PXD020620_cell_line DOHH2_400M_050219_2 6929 37.481 248.0 225160.0 25 0 38035.0 + 14548 IHFLYSVCTLY 11 78 679.8460101333385 1357.677467333477 2 679.8463012576103 MULTI CID FTMS 0 0 0 6924 277658.1875 0.2436209325321966 2 -0.1782989501953125 5 Unmodified _IHFLYSVCTLY_ REV__ENST00000375204.2_1_9:100008408-100054866:+|nuORF;REV__ENST00000375206.6_1_9:100008408-100053768:+|nuORF;REV__ENST00000527128.5_1_9:100008408-100053855:+|nuORF 13.90604991867851 0.7458848613461305 2 YADTG{I|L}Y 7 -1 39.232 0.0 0.0 2.8897 0.0 0.0 556.3243539277044 0.0 556.3243539277044 0.0 24.628070917755096 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 YADTG{I|L}Y 2.8897 - 90 1 1.94 55388.7 1.0 3492 3435 6924 DOHH2_400M_050219_2,6929 DOHH2_400M_050219_2,6929,IHFLYSVCTLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6930 37.486 311.0 325450.0 25 0 35130.0 + 9495 FLDKSGLQGY 10 115 564.290320263968 1126.566087594736 2 564.2904540896416 MULTI CID FTMS 0 0 0 6924 272694.8125 0.5812107709068584 -1 0.11883544921875 6 Unmodified _FLDKSGLQGY_ ENSG00000073921|ENST00000393346|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-5|PICALM 88.36371040165146 0.0102134265615327 2 KD{I|L}E 4 8 48.022 0.0 0.0 4.2627 0.0 0.0 623.2914906232437 0.0 623.2914906232437 0.0 5.202497070500272 0.0 0.0 0 1.0114393726401687 0.0 0.3494850021680094 0.8494850021680094 KD{I|L}E 4.2627 - 1696 1 1.94 79259.0 1.0 3493 3435 6924 DOHH2_400M_050219_2,6930 DOHH2_400M_050219_2,6930,FLDKSGLQGY True True FLDKSGLQGY 37.486494 564.290454089642 6444234.5 6924.0 nc|ENSG00000073921|Q13492-5|PICALM;;ENSG00000073921|ENST00000393346|PICALM;;nc|ENSG00000073921|Q13492-3|PICALM;;nc|ENSG00000073921|Q13492-4|PICALM;;nc|ENSG00000073921|Q13492-2|PICALM 8.550231138865152 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6931 37.491 256.0 221720.0 25 0 15488.0 + 18068 KTDSDSDLQLY 11 77 642.8010236508912 1283.5874943685824 2 642.8005859255791 MULTI CID FTMS 0 0 0 6924 176912.953125 0.7908291461673759 -1 0.11883544921875 7 Unmodified _KTDSDSDLQLY_ ENSG00000116337|ENST00000528667|AMPD2;ENST00000525415.1_1_1:110168821-110169689:+|nuORF;ENST00000526301.5_1_1:110162158-110172443:+|nuORF;nc|ENSG00000116337|Q01433-2|AMPD2;nc|ENSG00000116337|Q01433-4|AMPD2;nc|ENSG00000116337|Q01433-5|AMPD2 30.7034409873982 0.3712764582118616 2 {I|L}Q{I|L}Y 4 7 45.745 0.0 0.0 3.5639 0.0 0.0 748.2875647081233 0.0 748.2875647081233 0.0 37.43115345883339 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 + {I|L}Q{I|L}Y 3.5639 + + 48 1 1.94 53464.6 1.0 3494 3435 6924 DOHH2_400M_050219_2,6931 DOHH2_400M_050219_2,6931,KTDSDSDLQLY False True KTDSDSDLQLY 37.491271 642.800585925579 1988243.125 6924.0 ENSG00000116337|ENST00000528667|AMPD2;;ENST00000525415.1_1_1:110168821-110169689:+|nuORF;;nc|ENSG00000116337|Q01433-5|AMPD2;;nc|ENSG00000116337|Q01433-4|AMPD2;;nc|ENSG00000116337|Q01433-2|AMPD2;;ENST00000526301.5_1_1:110162158-110172443:+|nuORF 6.978784720102946 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6932 37.495 198.0 328110.0 25 0 50233.0 + 5538 DMKNKLEEL 9 92 560.2892028759547 1118.5638528187094 2 560.2902099490166 MULTI CID FTMS 0 0 0 6924 174712.28125 1.0 0 0.0 8 Unmodified _DMKNKLEEL_ ENSG00000103995|ENST00000380950|CEP152;nc|ENSG00000103995|O94986-1|CEP152;nc|ENSG00000103995|O94986-2|CEP152;nc|ENSG00000103995|O94986-3|CEP152 16.149105407346934 0.3995459350917656 2 [MD]KNKYHA{I|L} 9 3 + 46.341 0.0 0.0 4.1429 4.1429 80.125 0.0 0.0 0.0 33.24162613995121 12.09614293199344 12.09614293199344 9.208187539523747 0 0.0 1.6989700043360187 0.0 0.0 [MD]KNKYHA{I|L};[MD]KGGKYHA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NNKYHA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}KNK{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}KNNQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGNKYHA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NGGKYHA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}KGGK{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}KGGNQN;{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}KNGGQN 4.1429;3.3196;2.3549;2.3429;2.3189;1.5316;1.5316;1.5197;1.4957;1.4957 -;-;-;-;-;-;-;-;-;- 324 + 1 1.94 55592.2 1.0 3495 3435 6924 DOHH2_400M_050219_2,6932 DOHH2_400M_050219_2,6932,DMKNKLEEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6933 37.509 800.0 125770.0 25 0 4869.9 -1 0 122 703.367078582058 2107.0794063463736 3 703.7018920779228 MULTI CID FTMS 0 0 0 6924 136776.578125 1.0 0 0.0 9 2 VQAQ{[MS]|[{M(Oxidation (M))|F}A]}Y[PG]QA{I|L} 12 -1 68.488 0.0 0.0 3.2504 0.0 0.0 0.0 830.3752006832012 830.3752006832012 38.03248296405036 0.0 0.0 0.0 0 2.56295299324845 0.0 0.3807196863200844 0.0 VQAQ{[MS]|[{M(Oxidation (M))|F}A]}Y[PG]QA{I|L} 3.2504 - 5050 + 1 1.94 83489.1 0.6700000166893005 3496 3435 6924 DOHH2_400M_050219_2,6933 DOHH2_400M_050219_2,6933, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6934 37.515 362.0 214030.0 25 0 26137.0 -1 LTVPPSLT 8 110 435.2510543401133 868.4875557470267 2 435.2508727908134 MULTI CID FTMS 0 0 0 6924 135385.125 0.2241836305407172 -14 0.9943275451660156 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LTVPPSLT_ Tigger1_dup3614|chr4:153370819-153372334:-|1.1451237488797577|0.4461990466272801|1.36|48.0|17|2|sense 2.302733041254933 0.8103549651115762 2 W 1 -1 10.969 0.0 0.0 1.263 0.0 0.0 664.3979999382361 0.0 664.3979999382361 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.263 - 6 + 1 1.94 64944.8 1.0 3497 3435 6924 DOHH2_400M_050219_2,6934 DOHH2_400M_050219_2,6934,LTVPPSLT False False False False ERV PXD020620_cell_line DOHH2_400M_050219_2 6935 37.522 337.0 241950.0 25 0 15702.0 38176 TPQQKGWPM 9 141 536.7659090473794 1071.5172651615587 2 536.7661010622978 MULTI CID FTMS 0 0 0 6924 107431.03125 1.0 0 0.0 11 Unmodified _TPQQKGWPM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 22.736283301280096 0.2418982879461534 2 TADSVG 6 7 33.237 0.0 0.0 3.1019 0.0 0.0 0.0 538.2420137994749 538.2420137994749 1.124622252242922 0.0 0.0 0.0 0 0.1861818737241735 0.0 0.0 0.0 TADSVG 3.1019 - 1205 + 1 1.94 64953.9 1.0 3498 3435 6924 DOHH2_400M_050219_2,6935 DOHH2_400M_050219_2,6935,TPQQKGWPM False True HAIQKLYSL 37.521531 536.766101062298 347362.40625 6924.0 ENSG00000132842|ENST00000255194|AP3B1;;nc|ENSG00000132842|O00203-3|AP3B1 2.67486576239268 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6936 37.535 800.0 105070.0 25 0 6591.4 5964 DQLHFCRRHML 11 104 728.3564763370773 0 728.3561889529228 PEAK CID FTMS 0 0 0 6924 103698.7421875 1.0 0 0.0 12 Unmodified _DQLHFCRRHML_ ENSG00000146858|ENST00000275766|ZC3HAV1L 5.296884461304476 0.47618401536486 2 TGVG{M(Oxidation (M))|F}{I|L} 6 9 16.217 0.0 0.0 1.1148 0.0 0.0 368.117325755065 509.280588018225 877.3979137732899 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TGVG{M(Oxidation (M))|F}{I|L} 1.1148 - 348 + 1 1.94 69980.7 0.6000000238418579 3499 3435 6924 DOHH2_400M_050219_2,6936 DOHH2_400M_050219_2,6936,DQLHFCRRHML False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6937 37.544 422.0 255340.0 25 0 9603.1 + -1 DLMSKKIHL 9 175 362.2167003481608 361.2094238815608 1 362.2091552615166 MULTI CID FTMS 0 0 0 -1 0 13 nc|ENSG00000133706|Q9P2J5-2|LARS1;ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-3|LARS1 2 {[ET]|[MV]}{I|L} 3 -1 {[ET]|[MV]} + + 11.42 -2.8351 -1.2321 3.1616 3.1616 49.166 0.0 0.0 0.0 0.0 2.968134118955499 0.0 0.0 0 0.0 0.0 0.0 0.0 {[ET]|[MV]}{I|L} 3.1616 - 13 + 1 1.94 89232.2 1.0 3500 3435 6924 DOHH2_400M_050219_2,6937 DOHH2_400M_050219_2,6937, False False DLMSKKIHL 37.544059 362.209155261517 397370.53125 6924.0 nc|ENSG00000133706|Q9P2J5-2|LARS1;;ENSG00000133706|ENST00000394434|LARS1;;nc|ENSG00000133706|Q9P2J5-3|LARS1 0.7207154432932535 3.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6938 37.546 62.0 1165200.0 25 0 106820.0 + 11769 GLKVREYEL 9 72 553.8143507989168 0 553.8135864138603 PEAK CID FTMS 0 0 0 6924 97498.4921875 0.0166409553707423 -3 0.3511276245117187 14 Unmodified _GLKVREYEL_ ENSG00000142676|ENST00000643754|RPL11;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;nc|ENSG00000142676|P62913-2|RPL11 47.594388314883695 0.0382481814706656 2 GKV 3 6 23.759 0.0 0.0 2.149 0.0 0.0 113.08464678931188 705.3239621069999 818.4086088963119 0.0 0.0 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.3252574989159953 GKV 2.149 - 52 + 1 1.94 63020.2 1.0 3501 3435 6924 DOHH2_400M_050219_2,6938 DOHH2_400M_050219_2,6938,GLKVREYEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6939 37.559 800.0 109270.0 25 0 6734.3 + + -1 ASENTNHAVYNLY 13 110 748.3449543396794 1494.6753557461586 2 748.8462402224541 MULTI CID FTMS 0 0 0 6924 87855.71875 0.7457363076492546 -1 0.11883544921875 15 2 Carbamidomethyl (C) _RC(Carbamidomethyl (C))LEHC(Carbamidomethyl (C))PTFLY_ nc|ENSG00000036672|O75604-3|USP2;nc|ENSG00000036672|O75604-2|USP2;ENSG00000036672|ENST00000260187|USP2;nc|ENSG00000036672|O75604-4|USP2 8.745405648335112 0.8338865417133445 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}AVYN{I|L}Y 12 -1 + 66.282 0.0 0.0 4.4345 4.4345 75.817 0.0 0.0 0.0 10.000000000000009 10.629778129126288 10.000000000000009 4.771212547196633 0 0.7429928190999391 1.6989700043360187 0.0 1.7302046884880935 {[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}AVYN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}VAYN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}AVYGG{I|L}Y;[YN]{I|L}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}AVYN{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}VAYGG{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}Y{[MG]|[TS]}[MD]VYN{I|L}Y;[YN]{I|L}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}VAYN{I|L}Y;[EP]{M(Oxidation (M))|F}{I|L}[NG]{[YC]|[HE]}YN{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NYVA[MN]GRNY;{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}AVYS[R{M(Oxidation (M))|F}] 4.4345;4.1153;3.8258;3.7655;3.5066;3.4545;3.4463;3.4077;3.3474;3.3341 -;-;-;-;-;-;-;-;-;- 2262 1 1.94 67572.8 0.5 3502 3435 6924 DOHH2_400M_050219_2,6939 DOHH2_400M_050219_2,6939,RCLEHCPTFLY False False ASENTNHAVYNLY 37.559442 748.3452 1479086.125 6924.0 nc|ENSG00000036672|O75604-3|USP2;;nc|ENSG00000036672|O75604-2|USP2;;ENSG00000036672|ENST00000260187|USP2;;nc|ENSG00000036672|O75604-4|USP2 6.2339151700337725 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6940 37.564 225.0 271180.0 25 0 19464.0 -1 0 96 517.3214311474769 516.3141546808769 1 517.3221923708916 MULTI CID FTMS 0 0 0 6924 186934.171875 1.0 0 0.0 16 2 {I|L} 1 -1 12.764 0.0 0.0 2.4722 0.0 0.0 385.2190904492346 0.0 385.2190904492346 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.4722 - 27 + 1 1.94 50607.9 1.0 3503 3435 6924 DOHH2_400M_050219_2,6940 DOHH2_400M_050219_2,6940, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6942 37.568 19.0 2704600.0 25 0 244230.0 + 38189 TPRHIIVRF 9 84 380.2328101140902 1137.6766009424707 3 380.2328369021416 MULTI CID FTMS 0 0 0 6941 2037542.0 0.2962464207627312 2 -0.1734237670898437 1 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 17.86316937532769 0.3531482428618743 2 TPRH{I|L}{I|L}{M(Oxidation (M))|F}[RV] 9 2 + 71.119 0.0 0.0 6.2513 6.2513 83.965 0.0 0.0 0.0 50.15031251017078 7.147642715192504 7.147642715192504 6.020599913279625 0 1.3494850021680094 0.0 0.0 0.0 TPRH{I|L}{I|L}{M(Oxidation (M))|F}[RV];TPRH{I|L}{M(Oxidation (M))|F}{I|L}[RV];TPRH{M(Oxidation (M))|F}{I|L}{I|L}[RV] 6.2513;5.7221;4.6059 -;-;- 134 + 1 1.945 47816.3 1.0 3504 3436 6941 DOHH2_400M_050219_2,6942 DOHH2_400M_050219_2,6942,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6943 37.571 127.0 681980.0 25 0 108630.0 + 38192 TPRHIIVRF 9 87 569.8456898327325 1137.676826732265 2 569.8458740115166 MULTI CID FTMS 0 0 0 6941 401090.03125 0.3080224082079913 2 -0.1734237670898437 2 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 27.22323531849824 0.1848086127304535 2 Y 1 9 13.099 0.0 0.0 1.1514 0.0 0.0 956.6026365240604 0.0 956.6026365240604 0.0 6.109243748081781 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1514 - 15 + 1 1.945 68555.6 1.0 3505 3436 6941 DOHH2_400M_050219_2,6943 DOHH2_400M_050219_2,6943,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6944 37.573 73.0 664350.0 25 0 110120.0 + + -1 EEIHATGFNY 10 75 590.264381771695 1178.5142106101898 2 590.7668945193291 MULTI CID FTMS 0 0 0 6941 639925.25 0.4254067991437356 1 -0.080322265625 3 Carbamidomethyl (C),Oxidation (M) _YLGC(Carbamidomethyl (C))LMM(Oxidation (M))LY_ nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2|NPEPPSL1;nc|ENSG00000274487|A6NEC2-3|NPEPPSL1;ENSG00000141279|ENST00000322157|NPEPPS 9.347437153973935 0.588369872918737 2 [Y{I|L}][YC(Carbamidomethyl (C))]A{[NV]|[RG]}NY 9 -1 + 32.17 0.0 0.0 2.7297 2.7297 79.144 0.0 0.0 0.0 13.898474608419782 13.472959308331347 13.472959308331347 15.000000000000004 0 0.0 2.0 0.0 0.3807196863200844 [Y{I|L}][YC(Carbamidomethyl (C))]A{[NV]|[RG]}NY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{[SA]|[TG]}A{[NV]|[RG]}NY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}[QT]{[NV]|[RG]}NY;{[YD]|[{M(Oxidation (M))|F}M]}RR{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];{[YD]|[{M(Oxidation (M))|F}M]}[KA]{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[Q{I|L}]{[MS]|[{M(Oxidation (M))|F}A]} 2.7297;1.4569;1.3075;0.36754;0.32414;0.011899 -;-;-;-;-;- 158 + 1 1.945 41970.7 1.0 3506 3436 6941 DOHH2_400M_050219_2,6944 DOHH2_400M_050219_2,6944,YLGCLMMLY False False EEIHATGFNY 37.572793 590.766894519329 10454370.0 6941.0 nc|ENSG00000141279|P55786-2|NPEPPS;;nc|ENSG00000274487|A6NEC2|NPEPPSL1;;nc|ENSG00000274487|A6NEC2-3|NPEPPSL1;;ENSG00000141279|ENST00000322157|NPEPPS 5.882949511210124 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6945 37.575 123.0 412090.0 25 0 79424.0 + 23999 LVVSTQTALA 10 81 501.7947764028615 1001.574999872523 2 501.7952453494072 MULTI CID FTMS 0 0 0 6941 528892.0625 0.5395126385460992 -2 0.2168121337890625 4 Unmodified _LVVSTQTALA_ CON__P02769 25.399314129420983 0.3980215340001851 2 [{I|L}V]V[C(Carbamidomethyl (C))R]T[RV] 8 6 + 36.884 0.0 0.0 3.6826 3.6826 81.949 0.0 0.0 0.0 17.781512503836435 4.6040937697618745 4.6040937697618745 17.781512503836435 0 0.0 2.0 0.5 0.0 [{I|L}V]V[C(Carbamidomethyl (C))R]T[RV];[{I|L}A]T[WR]T[RV];[VS]V[WR]T[RV];[TA]{I|L}[WR]T[RV] 3.6826;1.9073;1.5856;0.73303 -;-;-;- 438 1 1.945 45739.5 1.0 3507 3436 6941 DOHH2_400M_050219_2,6945 DOHH2_400M_050219_2,6945,LVVSTQTALA False True LVVSTQTALA 37.575325 501.795245349407 7796442.5 6941.0 P02769 6.544287999471028 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 6946 37.58 259.0 277620.0 25 0 20371.0 -1 0 68 865.8985985942385 1729.7826442552769 2 865.8994628787041 MULTI CID FTMS 0 0 0 6941 292214.21875 0.9404812289064822 1 -0.080322265625 5 2 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 64.686 0.0 0.0 3.7395 0.0 0.0 844.419870402391 0.0 844.419870402391 0.0 36.60663683014111 0.0 0.0 0 1.5 0.0 0.0 1.1549471895720984 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.7395 - 170 1 1.945 56290.1 1.0 3508 3436 6941 DOHH2_400M_050219_2,6946 DOHH2_400M_050219_2,6946, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6947 37.585 247.0 892480.0 25 0 109550.0 -1 VARSARCR 8 140 488.2662725530053 974.5179921728106 2 488.2664367556572 MULTI CID FTMS 0 0 0 6941 271421.125 0.3230161997599732 -2 0.2168121337890625 6 Carbamidomethyl (C) _VARSARC(Carbamidomethyl (C))R_ ENST00000361389.8_1_14:77787419-77788944:+|nuORF;ENST00000553770.1_1_14:77787419-77791288:+|nuORF;ENST00000557639.5_1_14:77787419-77793819:+|nuORF 28.486842064014134 0.4448922141344407 2 {[VA]|[{I|L}G]}KVE 5 -1 51.0 0.0 0.0 5.2333 0.0 0.0 0.0 445.1836031549438 445.1836031549438 15.07007180900061 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.3054621874040891 0.3494850021680094 {[VA]|[{I|L}G]}KVE 5.2333 - 952 + 1 1.945 171984.0 1.0 3509 3436 6941 DOHH2_400M_050219_2,6947 DOHH2_400M_050219_2,6947,VARSARCR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6948 37.589 206.0 324400.0 25 0 43725.0 + 4755 DEIERKFDKW 10 83 455.8981275185981 1364.6725531559944 3 455.8983032107353 MULTI CID FTMS 0 0 0 6941 259697.515625 0.1125475417152006 5 -0.4049491882324219 7 Unmodified _DEIERKFDKW_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 31.635753872319068 0.2578985419642538 2 KDVE{I|L}KEGED 10 8 43.63 0.0 0.0 3.1971 0.0 0.0 204.09027297187657 0.0 204.09027297187657 0.0 17.872650971726607 0.0 0.0 0 0.0 0.0 0.0 0.0 KDVE{I|L}KEGED 3.1971 - 811 1 1.945 58948.4 1.0 3510 3436 6941 DOHH2_400M_050219_2,6948 DOHH2_400M_050219_2,6948,DEIERKFDKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6949 37.593 241.0 231350.0 25 0 14662.0 + 39782 VEQGIDAKW 9 113 523.2712107848099 1044.5278686364195 2 523.2704955935478 MULTI CID FTMS 0 0 0 6941 178237.859375 0.7780132846905502 1 -0.080322265625 8 Unmodified _VEQGIDAKW_ ENSG00000179151|ENST00000315127|EDC3 24.99096001346401 0.2132109383330889 2 {NN|[MP]|[D{I|L}]|[EV]}Q 3 6 29.437 0.0 0.0 2.8182 0.0 0.0 0.0 685.3353692069853 685.3353692069853 5.61452479087194 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}Q 2.8182 + + 272 1 1.945 48557.5 1.0 3511 3436 6941 DOHH2_400M_050219_2,6949 DOHH2_400M_050219_2,6949,VEQGIDAKW False True VEQGIDAKW 37.593195 523.270495593548 1423124.625 6941.0 ENSG00000179151|ENST00000315127|EDC3 4.9483310381571455 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6950 37.603 575.0 173980.0 25 0 23928.0 41592 VPPKVTTT 8 137 421.7511096353617 841.4876663375235 2 421.7510558962822 MULTI CID FTMS 0 0 0 6941 168705.265625 0.7332438221749079 -1 0.0979766845703125 9 Unmodified _VPPKVTTT_ ENSG00000113249|ENST00000523175|HAVCR1 2.577480529830294 0.808687252328423 2 Y 1 8 10.837 0.0 0.0 1.2879 0.0 0.0 660.4133845765845 0.0 660.4133845765845 0.0 1.4403250924980693 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2879 - 35 + 1 1.945 84766.3 1.0 3512 3436 6941 DOHH2_400M_050219_2,6950 DOHH2_400M_050219_2,6950,VPPKVTTT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6951 37.613 544.0 246650.0 25 0 12107.0 + 29484 QLKEHFAQF 9 157 574.2975517484152 1146.5805505636304 2 574.2986938357353 MULTI CID FTMS 0 0 0 6941 139994.96875 0.6259990668366054 4 -0.2690086364746094 10 Unmodified _QLKEHFAQF_ ENSG00000119705|ENST00000557342|SLIRP;ENST00000554074.1_1_14:78174487-78178182:+|nuORF;nc|ENSG00000119705|Q9GZT3-2|SLIRP 32.30548876998284 0.1201446275138228 2 [Q{I|L}][C(Carbamidomethyl (C))Q]{[RE]|[WV]}KW 8 7 + 24.503 0.0 0.0 2.1371 2.1371 47.576 0.0 0.0 0.0 2.1861796940034672 2.9934054945358177 2.1861796940034672 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.2887254899964357 [Q{I|L}][C(Carbamidomethyl (C))Q]{[RE]|[WV]}KW;[Q{I|L}][C(Carbamidomethyl (C))K]{[RE]|[WV]}KW;W[HS]YQ{I|L}KW;[Q{I|L}][C(Carbamidomethyl (C))Q][RP]AK{M(Oxidation (M))|F};[Q{I|L}][C(Carbamidomethyl (C))K][RP]AK{M(Oxidation (M))|F};{[YC]|[HE]}A{M(Oxidation (M))|F}KQ{I|L}K{M(Oxidation (M))|F};W[VP]{M(Oxidation (M))|F}{[RE]|[WV]}KW;[VP]W{[ET]|[MV]}Q{I|L}K{M(Oxidation (M))|F};{[CP]|[EA]}H{M(Oxidation (M))|F}KQ{I|L}K{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}EAKQ{I|L}K{M(Oxidation (M))|F} 2.1371;2.1371;1.9464;1.876;1.876;1.5172;1.2512;1.2184;1.1517;1.1118 -;-;-;-;-;-;-;-;-;- 1689 + 1 1.945 101178.6 1.0 3513 3436 6941 DOHH2_400M_050219_2,6951 DOHH2_400M_050219_2,6951,QLKEHFAQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6952 37.62 409.0 254640.0 25 0 17870.0 + 26842 PASLDCSLY 9 135 484.7230712082271 967.4315894832542 2 484.7236205935478 MULTI CID FTMS 0 0 0 6941 125990.0859375 0.2264272102230944 2 -0.1734237670898437 11 Unmodified _PASLDCSLY_ REV__ENST00000523988.5_1_13:45970327-45970543:-|nuORF 19.438996006549623 0.310492472477042 2 SY 2 -1 23.271 0.0 0.0 2.4055 0.0 0.0 699.3251637886989 0.0 699.3251637886989 0.0 0.8753718491936269 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 SY 2.4055 - 544 + 1 1.945 83255.4 1.0 3514 3436 6941 DOHH2_400M_050219_2,6952 DOHH2_400M_050219_2,6952,PASLDCSLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6953 37.63 564.0 278950.0 25 0 30573.0 + 26573 NVLPRTVSV 9 154 492.7964531822377 983.5783534312754 2 492.7952758669853 MULTI CID FTMS 0 0 0 6941 130293.0390625 0.6949852243574864 -1 0.0979766845703125 12 Unmodified _NVLPRTVSV_ ENSG00000129810|ENST00000412997|SGO1;nc|ENSG00000129810|Q5FBB7|SGO1 45.69961567697781 0.0497987121815769 2 {[NV]|[RG]}{I|L}PS[WR]{I|L} 8 5 + 25.64 0.0 0.0 2.6068 2.6068 71.273 0.0 0.0 0.0 8.530768805449188 0.947209416731816 0.947209416731816 5.440680443502757 0 0.8494850021680094 0.0 0.7302046884880937 0.0 {[NV]|[RG]}{I|L}PS[WR]{I|L};{[NV]|[RG]}{I|L}PS[R{I|L}]W;{[NV]|[RG]}{I|L}[{I|L}T][QP]TV;{[NV]|[RG]}{I|L}[{I|L}T][QP]S{I|L};{[NV]|[RG]}{I|L}V[PA][KP]{M(Oxidation (M))|F};{[NV]|[RG]}{I|L}[{I|L}T][QT]PV;{[NV]|[RG]}{I|L}P{[VA]|[{I|L}G]}[KP]{M(Oxidation (M))|F};{[NV]|[RG]}{I|L}[{I|L}A]{[WT]|[RM]}[PA];{[NV]|[RG]}V{I|L}[PA][KP]{M(Oxidation (M))|F};{[NV]|[RG]}VD[{I|L}V]{I|L}{[NV]|[RG]} 2.6068;2.0537;1.6638;1.4382;1.3034;1.2755;0.69133;0.64843;0.5383;0.50331 -;-;-;-;-;-;-;-;-;- 342 + 1 1.945 123001.4 1.0 3515 3436 6941 DOHH2_400M_050219_2,6953 DOHH2_400M_050219_2,6953,NVLPRTVSV True True NVLPRTVSV 37.630004 492.795275866985 1133330.125 6941.0 ENSG00000129810|ENST00000412997|SGO1;;nc|ENSG00000129810|Q5FBB7|SGO1 3.831004540125529 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6954 37.639 451.0 178760.0 25 0 17312.0 + 29624 QMDPSSNFY 9 117 544.7209405949518 1087.4273282567035 2 544.7212402224541 MULTI CID FTMS 0 0 0 6941 112392.421875 0.2607952572785839 2 -0.1734237670898437 13 Unmodified _QMDPSSNFY_ ENSG00000138670|ENST00000264400|RASGEF1B;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B 25.399314129420983 0.2080152500878129 2 [{I|L}T][HN]DT{I|L} 7 9 26.29 0.0 0.0 2.4176 0.0 0.0 0.0 290.0127276535813 290.0127276535813 7.706444443591067 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5866968715561641 0.0 [{I|L}T][HN]DT{I|L} 2.4176 - 569 1 1.945 66493.1 1.0 3516 3436 6941 DOHH2_400M_050219_2,6954 DOHH2_400M_050219_2,6954,QMDPSSNFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6955 37.644 260.0 275370.0 25 0 71912.0 + 26893 PDIKMRAL 8 99 472.2725137084302 0 472.2736999392509 PEAK CID FTMS 0 0 0 6941 155301.484375 1.0 0 0.0 14 Unmodified _PDIKMRAL_ REV__ENSG00000089154|ENST00000300648|GCN1 18.13498045792455 0.4501116112875982 2 VT 2 -1 9.0237 0.0 0.0 0.95739 0.0 0.0 577.3597419170574 162.02321802310783 739.3829599401652 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 VT 0.95739 - 32 + 1 1.945 61554.9 1.0 3517 3436 6941 DOHH2_400M_050219_2,6955 DOHH2_400M_050219_2,6955,PDIKMRAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6957 37.649 109.0 434260.0 25 0 73207.0 + 10934 GAKRHSGL 8 85 413.238996635502 824.463440337804 2 413.2383911013603 MULTI CID FTMS 0 0 0 6956 407792.875 0.8601036959280995 1 -0.0931015014648437 1 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 2.302733041254933 0.8103549651115762 2 M 1 -1 3.9794 0.0 0.0 0.48267 0.0 0.0 411.2440932692477 279.1456698053344 690.3897630745821 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.48267 - 1 + 1 1.945 47362.2 1.0 3518 3437 6956 DOHH2_400M_050219_2,6957 DOHH2_400M_050219_2,6957,GAKRHSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6958 37.657 466.0 210160.0 25 0 12175.0 + 2693 ATEDPWKTNY 10 120 612.7801090649566 1223.5456651967131 2 612.7799560427666 MULTI CID FTMS 0 0 0 6956 203202.25 0.0068115059945617 19 -1.5818824768066406 2 Unmodified _ATEDPWKTNY_ ENSG00000139684|ENST00000378720|ESD 80.6760300276096 0.0165137828474802 2 [TA]EDPW[KT]NY 10 0 [TA]E + + 49.767 24.78 8.2292 4.0675 4.0675 51.859 0.0 0.0 0.0 0.0 13.630682165566974 0.0 0.0 0 1.7302046884880935 0.0 0.3054621874040891 1.316901560044258 + + [TA]EDPW[KT]NY 4.0675 + + 829 + 1 1.945 78412.8 1.0 3519 3437 6956 DOHH2_400M_050219_2,6958 DOHH2_400M_050219_2,6958,ATEDPWKTNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6959 37.66 125.0 642700.0 25 0 35117.0 + 40790 VLLKARLVPA 10 94 360.58150946828266 1078.722699005048 3 360.5816528201103 MULTI CID FTMS 0 0 0 6956 455791.53125 0.1861987255894317 -2 0.1782989501953125 3 Unmodified _VLLKARLVPA_ ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B 15.738622578938676 0.5834632108994704 2 WV{I|L}{I|L}R 5 7 36.938 0.0 0.0 3.4243 0.0 0.0 0.0 408.2746370904906 408.2746370904906 13.381681563112409 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 WV{I|L}{I|L}R 3.4243 - 111 + 1 1.945 78511.7 1.0 3520 3437 6956 DOHH2_400M_050219_2,6959 DOHH2_400M_050219_2,6959,VLLKARLVPA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6960 37.661 70.0 1040400.0 25 0 98589.0 + 5162 DIKRLIYVT 9 81 374.2296003883728 1119.6669717653183 3 374.5642883181572 MULTI CID FTMS 0 0 0 6956 318793.53125 1.0 0 0.0 4 Unmodified _DIKRLIYVT_ REV__ENSG00000154556|ENST00000695409|SORBS2;REV__ENST00000480146.1_1_4:186535903-186536357:-|nuORF;REV__nc|ENSG00000154556|O94875-10|SORBS2;REV__nc|ENSG00000154556|O94875-11|SORBS2;REV__nc|ENSG00000154556|O94875-12|SORBS2;REV__nc|ENSG00000154556|O94875-2|SORBS2;REV__nc|ENSG00000154556|O94875-3|SORBS2;REV__nc|ENSG00000154556|O94875-4|SORBS2;REV__nc|ENSG00000154556|O94875-5|SORBS2;REV__nc|ENSG00000154556|O94875-7|SORBS2;REV__nc|ENSG00000154556|O94875-8|SORBS2;REV__nc|ENSG00000154556|O94875-9|SORBS2;REV__nc|ENSG00000154556|O94875|SORBS2 6.2057823575117 0.6980434486082533 2 {I|L} 1 -1 11.259 0.0 0.0 1.0056 0.0 0.0 988.5720601215668 0.0 988.5720601215668 0.0 1.654966095207122 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0056 + + 17 + 1 1.945 64060.0 1.0 3521 3437 6956 DOHH2_400M_050219_2,6960 DOHH2_400M_050219_2,6960,DIKRLIYVT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6961 37.664 122.0 556060.0 25 0 45423.0 + 25683 NGYKRVLAL 9 107 517.310511646286 1032.606470359372 2 517.3103515505791 MULTI CID FTMS 0 0 0 6956 327670.3125 0.8399384696377077 -1 0.080322265625 5 Unmodified _NGYKRVLAL_ ENSG00000089157|ENST00000392514|RPLP0;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 52.268347100219714 0.0353964759249114 2 NGYK 4 5 47.677 0.0 0.0 4.6172 0.0 0.0 0.0 567.3640230768186 567.3640230768186 19.23393743112328 0.0 0.0 0.0 0 0.75 0.8239087409443188 0.0 0.0 + NGYK 4.6172 + + 140 + 1 1.945 52839.2 1.0 3522 3437 6956 DOHH2_400M_050219_2,6961 DOHH2_400M_050219_2,6961,NGYKRVLAL True True NGYKRVLAL 37.663868 517.310351550579 2106304.25 6956.0 ENSG00000089157|ENST00000392514|RPLP0;;nc|ENSG00000213553|Q8NHW5|RPLP0P6;;nc|ENSG00000089157|P05388-2|RPLP0 4.841405789057414 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6962 37.667 179.0 581600.0 25 0 53114.0 + 19660 LGIEKMREI 9 130 363.5417645192439 1087.6034641579315 3 363.5415222048759 MULTI CID FTMS 0 0 0 6956 233997.34375 0.8971121777351794 -1 0.080322265625 6 Unmodified _LGIEKMREI_ ENSG00000083067|ENST00000677713|TRPM3;nc|ENSG00000083067|Q9HCF6-10|TRPM3;nc|ENSG00000083067|Q9HCF6-11|TRPM3;nc|ENSG00000083067|Q9HCF6-2|TRPM3;nc|ENSG00000083067|Q9HCF6-4|TRPM3;nc|ENSG00000083067|Q9HCF6-5|TRPM3;nc|ENSG00000083067|Q9HCF6-6|TRPM3;nc|ENSG00000083067|Q9HCF6-7|TRPM3;nc|ENSG00000083067|Q9HCF6-8|TRPM3;nc|ENSG00000083067|Q9HCF6|TRPM3 29.84058131909904 0.1515068451768857 2 {M(Oxidation (M))|F} 1 8 12.474 0.0 0.0 1.1469 0.0 0.0 922.5240859614458 0.0 922.5240859614458 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.1469 + + 226 + 1 1.945 86462.3 1.0 3523 3437 6956 DOHH2_400M_050219_2,6962 DOHH2_400M_050219_2,6962,LGIEKMREI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6963 37.671 179.0 327910.0 25 0 22577.0 + -1 FSDPGCTIQF 10 96 586.2589131917185 1170.503273450237 2 586.2593871951103 MULTI CID FTMS 0 0 0 6956 185077.796875 0.7798896617129594 -1 0.080322265625 7 Carbamidomethyl (C) _FSDPGC(Carbamidomethyl (C))TIQF_ REV__ENSG00000107959|ENST00000224949|PITRM1;REV__nc|ENSG00000107959|Q5JRX3-2|PITRM1;REV__nc|ENSG00000107959|Q5JRX3-3|PITRM1 29.081581746732265 0.3152867722954398 2 T{I|L}Q{M(Oxidation (M))|F} 4 -1 37.977 0.0 0.0 3.2445 0.0 0.0 663.2405873029312 0.0 663.2405873029312 0.0 3.764552509497321 0.0 0.0 0 0.3807196863200844 0.0 0.6747425010840047 0.0 T{I|L}Q{M(Oxidation (M))|F} 3.2445 + + 221 1 1.945 49346.7 1.0 3524 3437 6956 DOHH2_400M_050219_2,6963 DOHH2_400M_050219_2,6963,FSDPGCTIQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6964 37.68 538.0 376830.0 25 0 40581.0 + 40793 VLLKARLVPA 10 135 540.368746999787 1078.722941066374 2 540.3690063357353 MULTI CID FTMS 0 0 0 6956 164359.0 0.1790670285216857 -2 0.1782989501953125 8 Unmodified _VLLKARLVPA_ ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B 61.08992128646608 0.0337271188422265 2 V{I|L}{I|L}KAR{I|L}VAP 10 2 + 71.534 0.0 0.0 6.6314 6.6314 92.26 0.0 0.0 0.0 42.41795208734355 7.212463990471704 7.212463990471704 15.329335245017496 0 2.1237125054200234 1.6989700043360187 0.0 0.0 V{I|L}{I|L}KAR{I|L}VAP;V{I|L}{I|L}KAR{I|L}[PG]{I|L};V{I|L}{I|L}KAR{I|L}AVP;V{I|L}{I|L}KAR{I|L}{I|L}GP 6.6314;5.2103;5.1751;4.8551 -;-;-;- 590 + 1 1.945 162915.7 1.0 3525 3437 6956 DOHH2_400M_050219_2,6964 DOHH2_400M_050219_2,6964,VLLKARLVPA True True VLLKARLVPA 37.680279 540.369006335735 52835240.0 6956.0 ENSG00000144369|ENST00000304698|FAM171B;;nc|ENSG00000144369|Q6P995-2|FAM171B 7.017492771148682 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6965 37.694 800.0 236590.0 25 0 11237.0 + -1 EMLFYRMRCER 11 150 824.8711215474099 1647.7276901616196 2 825.3704711794853 MULTI CID FTMS 0 0 0 6956 129748.765625 0.1803552711197293 -2 0.1782989501953125 9 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))EMLFYRM(Oxidation (M))RC(Carbamidomethyl (C))ER_ REV__ENSG00000221947|ENST00000408926|XKR9 2.735195868890462 0.8622431031272658 2 [QA]HDEAGAQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 85.896 0.0 0.0 5.213 5.213 73.736 0.0 0.0 0.0 2.2675449504608025 55.401261326517 2.2675449504608025 0.6694678963061307 0 0.7887254899964358 0.0 0.9143943297944483 2.0356668758921828 [QA]HDEAGAQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]HDEAQQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]HDEQAQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]HDEAGANQA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]HDEAQNQA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]HDEAGAQGGA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]HDEAGA[AG]NA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};[AG]AHDEAGAQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]HDEAQQGGA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]HDEAQ[AG]NA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]} 5.213;5.1723;4.807;4.7992;4.7586;4.6649;4.6649;4.6423;4.6231;4.6231 -;-;-;-;-;-;-;-;-;- 14338 1 1.945 129858.2 0.6000000238418579 3526 3437 6956 DOHH2_400M_050219_2,6965 DOHH2_400M_050219_2,6965,EMLFYRMRCER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6966 37.708 800.0 275230.0 25 0 12638.0 + 13765 HSDPMFSSY 9 218 535.7160091326768 1069.4174653321536 2 535.7166625857353 MULTI CID FTMS 0 0 0 6956 117901.828125 0.6678681841101775 -1 0.080322265625 10 Unmodified _HSDPMFSSY_ ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3 88.90359156742426 0.0153595091083554 2 [HS]DPM{M(Oxidation (M))|F}SSY 9 0 + 62.349 0.0 0.0 5.8302 5.8302 88.621 0.0 0.0 0.0 4.137342758552691 45.3596597852934 4.137342758552691 11.49166239860314 0 0.75 0.0 1.829689690656103 0.0 + + [HS]DPM{M(Oxidation (M))|F}SSY;{[{M(Oxidation (M))|F}C]|[YS]}WM{M(Oxidation (M))|F}SSY;[QA]SSE[DP]SSY;[HM]S{M(Oxidation (M))|F}[DP]SSY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[DS]|[MA]|[CV]|TT}M{M(Oxidation (M))|F}SSY;{[MG]|[TS]}[{M(Oxidation (M))|F}T]M{M(Oxidation (M))|F}SSY;{[ES]|[DT]|[{I|L}C]}[YG]M{M(Oxidation (M))|F}SSY;{[MG]|[TS]}M[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}SSY;[HS]D[HT]HSSY;{[CT]|[{M(Oxidation (M))|F}G]}[MT]M{M(Oxidation (M))|F}SSY 5.8302;4.7556;4.374;4.0405;3.8215;3.4575;3.3801;3.2354;3.2283;3.1508 +;-;-;-;-;-;-;-;-;- + 1800 1 1.945 165751.0 0.6000000238418579 3527 3437 6956 DOHH2_400M_050219_2,6966 DOHH2_400M_050219_2,6966,HSDPMFSSY True True HSDPMFSSY 37.707958 535.716662585735 1422687.875 6956.0 ENSG00000147548|ENST00000317025|NSD3;;nc|ENSG00000147548|Q9BZ95-5|NSD3;;nc|ENSG00000147548|Q9BZ95-4|NSD3 8.55516497294108 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6967 37.722 800.0 346590.0 25 0 20673.0 -1 YLFYCKNCRFY 11 148 788.8549023906082 1575.6952518480164 2 788.8553954958916 MULTI CID FTMS 0 0 0 6956 93027.03125 0.1126432728861438 -3 0.2971343994140625 11 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 2 {[QN]|[E{I|L}]|[KN]}AGAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y 14 -1 + 96.926 0.0 0.0 6.1513 6.1513 81.098 0.0 0.0 0.0 15.57323053215191 43.93513940908907 15.57323053215191 3.5283216485112803 0 1.2034021960761268 0.0 1.2080702636867084 3.6470748756446607 {[QN]|[E{I|L}]|[KN]}AGAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQA{M(Oxidation (M))|F}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}QAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}QQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQA{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQA{M(Oxidation (M))|F}{M(Oxidation (M))|F}QQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}QAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q[AG]NA{M(Oxidation (M))|F}Y 6.1513;5.9274;5.6974;5.577;5.577;5.577;5.3516;5.3516;5.3516;5.1216 -;-;-;-;-;-;-;-;-;- 40319 1 1.945 189873.1 0.550000011920929 3528 3437 6956 DOHH2_400M_050219_2,6967 DOHH2_400M_050219_2,6967,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6968 37.737 800.0 161670.0 25 0 7230.7 + 646 AELPKDTFWS 10 146 597.2957053303992 0 597.2955810427666 PEAK CID FTMS 0 0 0 6956 91096.4375 0.8201636705785303 -1 0.080322265625 12 Unmodified _AELPKDTFWS_ ENSG00000156096|ENST00000305107|UGT2B4;nc|ENSG00000156096|P06133-3|UGT2B4 16.149105407346934 0.3281668441439271 2 {I|L}[HK]EQ 5 8 24.551 0.0 0.0 2.0587 0.0 0.0 298.05802509725294 256.1672457330688 554.2252708303217 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 1.0994850021680094 {I|L}[HK]EQ 2.0587 - 829 + 1 1.945 100869.7 0.5 3529 3437 6956 DOHH2_400M_050219_2,6968 DOHH2_400M_050219_2,6968,AELPKDTFWS False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6970 37.745 196.0 321850.0 25 0 28627.0 + 1014 AGADHIITM 9 106 464.7315390040196 927.4485250748392 2 464.7319213747978 MULTI CID FTMS 0 0 0 6969 239498.5625 0.0379929304963944 7 -0.6015625 1 Unmodified _AGADHIITM_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 28.486842064014134 0.1687311288560894 2 [YV]T[WK]TM 7 7 + 34.122 0.0 0.0 3.6791 3.6791 70.327 0.0 0.0 0.0 -0.7660625688767198 2.4391626408079574 -0.7660625688767198 2.4865124202832334 0 0.4247425010840047 0.0 0.5649093276264391 0.0 [YV]T[WK]TM;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[WK]TM;{[{M(Oxidation (M))|F}C]|[YS]}[WK]T{I|L}M;{[DA]|[EG]}HQ{I|L}{I|L}[MT];[H{I|L}]{[DA]|[EG]}Q{I|L}[MT];{[DA]|[EG]}HQ{I|L}T{I|L}M;[H{I|L}]{[DA]|[EG]}GA{I|L}[MT];[H{I|L}]{[DA]|[EG]}QT{I|L}M;{[{M(Oxidation (M))|F}C]|[YS]}[WK]{I|L}[MT];[H{I|L}]{[DA]|[EG]}GAT{I|L}M 3.6791;3.411;2.4062;2.3427;2.063;2.038;2.0078;1.7583;1.7138;1.7031 -;-;-;-;-;-;-;-;-;- 206 + 1 1.949 54357.0 1.0 3530 3438 6969 DOHH2_400M_050219_2,6970 DOHH2_400M_050219_2,6970,AGADHIITM False True AGADHIITM 37.74473 464.731921374798 99958134.0 6969.0 ENSG00000147224|ENST00000372435|PRPS1;;ENST00000430496.1_1_9:127913263-127913512:+|nuORF;;ENSG00000229937|ENST00000506618|PRPS1L1;;ENSG00000101911|ENST00000380668|PRPS2;;nc|ENSG00000147224|P60891-2|PRPS1;;nc|ENSG00000101911|P11908-2|PRPS2 6.475464820861816 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6971 37.749 204.0 246110.0 25 0 21687.0 + 9496 FLDKSGLQGY 10 82 564.290320263968 1126.566087594736 2 564.2905761599541 MULTI CID FTMS 0 0 0 6969 123836.765625 0.2639407084999762 2 -0.0955848693847656 2 Unmodified _FLDKSGLQGY_ ENSG00000073921|ENST00000393346|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-5|PICALM 22.736283301280096 0.4578556481593033 2 {I|L}E 2 9 24.776 0.0 0.0 2.1993 0.0 0.0 866.4140055932394 0.0 866.4140055932394 0.0 1.064921830680703 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}E 2.1993 - 20 1 1.949 42348.0 1.0 3531 3438 6969 DOHH2_400M_050219_2,6971 DOHH2_400M_050219_2,6971,FLDKSGLQGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6972 37.75 5.4 8613300.0 25 0 1419000.0 + 26167 NQATYVKGIL 10 70 369.5452771529824 1105.6140020591472 3 369.5455200076103 MULTI CID FTMS 0 0 0 6969 9194948.0 1.0 0 0.0 3 Unmodified _NQATYVKGIL_ REV__ENSG00000104368|ENST00000220809|PLAT;REV__ENST00000524261.1_1_8:42040235-42040316:-|nuORF;REV__nc|ENSG00000104368|P00750-2|PLAT;REV__nc|ENSG00000104368|P00750-3|PLAT;REV__nc|ENSG00000104368|P00750-4|PLAT 8.155526934196011 0.6889124077178598 2 {I|L} 1 -1 14.604 0.0 0.0 1.3209 0.0 0.0 974.5190293802394 0.0 974.5190293802394 0.0 -3.0153844027245924 -3.0153844027245924 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3209 + + 44 + 1 1.949 42725.1 1.0 3532 3438 6969 DOHH2_400M_050219_2,6972 DOHH2_400M_050219_2,6972,NQATYVKGIL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6973 37.753 164.0 417120.0 25 0 43631.0 + 535 AEIDSIHQL 9 75 513.2665447746363 1024.5185366160724 2 513.2676879763603 MULTI CID FTMS 0 0 0 6969 297928.5625 0.4391720616646659 -2 0.1734237670898437 4 Unmodified _AEIDSIHQL_ ENSG00000168818|ENST00000306200|STX18;ENST00000503692.5_1_4:4422578-4426973:-|nuORF 39.94969957227396 0.0757326808254658 2 {[CP]|[EA]}{I|L}DS{I|L}H[Q{I|L}] 9 0 + 42.029 0.0 0.0 4.1024 4.1024 83.235 0.0 0.0 0.0 8.59446989507444 11.18362703119672 8.59446989507444 17.84318117920506 0 0.4247425010840047 0.0 0.4247425010840047 0.6421590589602533 + + {[CP]|[EA]}{I|L}DS{I|L}H[Q{I|L}];{[CP]|[EA]}{I|L}{[WT]|[RM]}S[YR];{[CP]|[EA]}{I|L}{[CA]|SS}{I|L}S[YR];{[CP]|[EA]}{I|L}[{M(Oxidation (M))|F}V]Q[YR];{[CP]|[EA]}{I|L}[{M(Oxidation (M))|F}V][AG][YR];{[CP]|[EA]}{[WT]|[RM]}{I|L}S[YR] 4.1024;2.3607;2.1682;1.8242;0.92017;0.74969 +;-;-;-;-;- + 275 + 1 1.949 59419.3 1.0 3533 3438 6969 DOHH2_400M_050219_2,6973 DOHH2_400M_050219_2,6973,AEIDSIHQL True True AEIDSIHQL 37.753034 513.26768797636 3230419.5 6969.0 ENST00000503692.5_1_4:4422578-4426973:-|nuORF;;ENSG00000168818|ENST00000306200|STX18 7.028327941894531 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6974 37.757 206.0 455250.0 25 0 46265.0 + 34468 SMDEKVELY 9 117 557.2601117941113 1112.5056706550224 2 557.2602416872978 MULTI CID FTMS 0 0 0 6969 234003.125 0.1845682860509944 -2 0.1734237670898437 5 Unmodified _SMDEKVELY_ ENSG00000131143|ENST00000253452|COX4I1 53.40400417844725 0.0329064971918313 2 {[MS]|[{M(Oxidation (M))|F}A]}[RP]{[MS]|[{M(Oxidation (M))|F}A]}E{I|L}Y 9 4 + 52.571 0.0 0.0 4.7254 4.7254 72.429 0.0 0.0 0.0 1.2358997863662324 8.898182314357975 1.2358997863662324 1.2358997863662324 0 1.424742501084005 1.5228787452803376 0.7742275032520141 0.0 {[MS]|[{M(Oxidation (M))|F}A]}[RP]{[MS]|[{M(Oxidation (M))|F}A]}E{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KV{[MS]|[{M(Oxidation (M))|F}A]}E{I|L}Y;{[MS]|[{M(Oxidation (M))|F}A]}[RP]E{[MS]|[{M(Oxidation (M))|F}A]}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KVE{[MS]|[{M(Oxidation (M))|F}A]}{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DV{[MS]|[{M(Oxidation (M))|F}A]}E{I|L}Y;{[MS]|[{M(Oxidation (M))|F}A]}[RP]E{I|L}{[MS]|[{M(Oxidation (M))|F}A]}Y;AA{[ET]|[MV]}V{[MS]|[{M(Oxidation (M))|F}A]}E{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KVE{I|L}{[MS]|[{M(Oxidation (M))|F}A]}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DVE{[MS]|[{M(Oxidation (M))|F}A]}{I|L}Y;AA{[ET]|[MV]}VE{[MS]|[{M(Oxidation (M))|F}A]}{I|L}Y 4.7254;4.6143;4.488;4.3769;4.3655;4.3131;4.2155;4.202;4.1281;3.9781 -;-;-;-;-;-;-;-;-;- 1229 1 1.949 72759.6 1.0 3534 3438 6969 DOHH2_400M_050219_2,6974 DOHH2_400M_050219_2,6974,SMDEKVELY True True SMDEKVELY 37.756988 557.260241687298 9618097.0 6969.0 ENSG00000131143|ENST00000253452|COX4I1 7.159973780314128 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6975 37.762 277.0 305320.0 25 0 40115.0 + + 14102 IAPSHVIEM 9 113 498.762751715771 995.510950498342 2 498.7632629275322 MULTI CID FTMS 0 0 0 6969 171102.8125 0.8556209482731476 -1 0.0931015014648437 6 Unmodified _IARTLYEM_ ENSG00000184863|ENST00000401878|RBM33;ENST00000307403.6_1_7:155532339-155538302:+|nuORF 24.67388899826682 0.525179942228231 2 [{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V[R{M(Oxidation (M))|F}] 8 -1 + 40.903 0.0 0.0 4.1087 4.1087 72.398 0.0 0.0 0.0 6.505149978319906 3.27955014859348 3.27955014859348 3.0102999566398125 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V[R{M(Oxidation (M))|F}];[{I|L}A][YV]EV[R{M(Oxidation (M))|F}];[{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V[CS]{I|L};[{I|L}A]R[YT]E{I|L}M;[{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}SMA{I|L};[YV]AE{I|L}V[R{M(Oxidation (M))|F}];[YV]EA{I|L}V[R{M(Oxidation (M))|F}];[YV]A{I|L}EV[R{M(Oxidation (M))|F}];[YV]E{I|L}AV[R{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}[YK]EA{I|L}M 4.1087;3.8063;3.7793;3.4553;2.9989;2.9518;2.9518;2.6494;2.347;2.2687 -;-;-;-;-;-;-;-;-;- 416 + 1 1.949 67235.8 1.0 3535 3438 6969 DOHH2_400M_050219_2,6975 DOHH2_400M_050219_2,6975,IARTLYEM False False IAPSHVIEM 37.762084 498.763262927532 1372173.25 6969.0 ENSG00000184863|ENST00000401878|RBM33;;ENST00000307403.6_1_7:155532339-155538302:+|nuORF 4.333400885264079 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6976 37.776 800.0 294400.0 25 0 30741.0 + 43783 YEMEVSQRL 9 151 577.7789669656055 1153.543380998011 2 577.7800781130791 MULTI CID FTMS 0 0 0 6969 152268.125 0.3855885547642294 -2 0.1734237670898437 7 Unmodified _YEMEVSQRL_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 89.40071534611396 0.0152361884002446 2 YEMEVSQR{I|L} 9 0 + 109.02 0.0 0.0 9.4509 9.4509 91.826 0.0 0.0 0.0 86.94174435103608 5.483754299755802 5.483754299755802 8.580526254793114 0 1.1549471895720984 2.0 1.1861818737241734 1.615356566548286 + + YEMEVSQR{I|L};YEMEVS[R{I|L}]Q;YEMEVS[AG]R{I|L};YEM{I|L}DSQR{I|L};YE{I|L}MDSQR{I|L};YEMEV{I|L}[KG]W;YEMEV{I|L}{[VA]|[{I|L}G]}[NS];YEM{I|L}DS[R{I|L}]Q;YEM{I|L}DS[AG]R{I|L};YEMEVKKMP 9.4509;8.7071;8.6527;8.5691;8.1948;8.1929;7.9808;7.8252;7.7708;7.6816 +;-;-;-;-;-;-;-;-;- + 1381 + 1 1.949 176095.7 0.6899999976158142 3536 3438 6969 DOHH2_400M_050219_2,6976 DOHH2_400M_050219_2,6976,YEMEVSQRL True True YEMEVSQRL 37.775915 577.780078113079 2427149.25 6969.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 5.759259780248006 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6977 37.79 800.0 194310.0 25 0 35388.0 -1 EMYQELMEMCH 11 135 766.7780767494886 1531.5416005657771 2 766.7792846560478 MULTI CID FTMS 0 0 0 6969 120618.0078125 0.4654242675548827 -3 0.2714004516601562 8 Carbamidomethyl (C),2 Oxidation (M) _EMYQELM(Oxidation (M))EM(Oxidation (M))C(Carbamidomethyl (C))H_ ENSG00000144010|ENST00000639673|TRIM43B;ENSG00000144015|ENST00000272395|TRIM43 5.296884461304476 0.8501568894076437 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HC]PNS[NP]D{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 13 -1 + 63.97 0.0 0.0 4.1769 4.1769 70.448 0.0 0.0 0.0 2.6103414981642814 27.14631742013088 2.6103414981642814 1.3194591750836082 0 2.086696871556164 0.0 0.9604093769761876 0.8494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HC]PNS[NP]D{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}CSNS[NP]D{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[NP]SNM[YN]NSC{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CA]|SS}YNS[NP]D{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[NP]SNP{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}SC{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[NP]SNDE{[YD]|[{M(Oxidation (M))|F}M]}SC{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[NP]SNDE{[YD]|[{M(Oxidation (M))|F}M]}P[HC]{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}CSGGS[NP]D{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}CSNSYY{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[NS]PNM[YN]NSC{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 4.1769;4.0907;3.8321;3.8125;3.5648;3.4162;3.3225;3.221;2.9029;2.8895 -;-;-;-;-;-;-;-;-;- 1428 1 1.949 111240.0 0.6100000143051147 3537 3438 6969 DOHH2_400M_050219_2,6977 DOHH2_400M_050219_2,6977,EMYQELMEMCH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6978 37.8 578.0 242650.0 25 0 21799.0 + 9749 FMKVQIGL 8 150 468.27436035202135 0 468.2814208865166 PEAK CID FTMS 0 0 0 -1 0 9 Unmodified _FMKVQIGL_ REV__ENST00000532121.5_1_11:36371570-36422672:+|nuORF 10.183394434864962 0.5394990767616434 2 KPQ 3 -1 13.082 0.0 0.0 1.3998 0.0 0.0 242.1030897452552 336.18064294986567 578.2837326951209 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 KPQ 1.3998 - 161 + 1 1.949 112723.7 1.0 3538 3438 6969 DOHH2_400M_050219_2,6978 DOHH2_400M_050219_2,6978,FMKVQIGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6979 37.805 280.0 215450.0 25 0 15701.0 + 25893 NLIQKSESF 9 104 533.2826097125482 1064.5506664918962 2 533.2847167849541 MULTI CID FTMS 0 0 0 6969 110250.5703125 0.1032983946669258 3 -0.2315254211425781 10 Unmodified _NLIQKSESF_ ENSG00000117724|ENST00000366955|CENPF 41.8396318013385 0.0653578398400075 2 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q 4 5 45.005 0.0 0.0 4.2276 0.0 0.0 0.0 593.2573336236936 593.2573336236936 28.578409410397462 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q 4.2276 + + 104 + 1 1.949 53312.2 1.0 3539 3438 6969 DOHH2_400M_050219_2,6979 DOHH2_400M_050219_2,6979,NLIQKSESF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6980 37.814 442.0 314880.0 25 0 67626.0 -1 0 121 459.2804224664865 458.27314599988654 1 459.2806274294853 MULTI CID FTMS 0 0 0 6969 112010.4453125 0.3196439592880773 2 -0.0955848693847656 11 2 {I|L} 1 -1 11.99 0.0 0.0 2.6163 0.0 0.0 327.1778986627756 0.0 327.1778986627756 0.0 1.8001500618731097 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.6163 - 28 + 1 1.949 108471.2 1.0 3540 3438 6969 DOHH2_400M_050219_2,6980 DOHH2_400M_050219_2,6980, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6982 37.819 17.0 3417500.0 25 0 279950.0 + 11770 GLKVREYEL 9 73 553.8143507989168 0 553.8145019412041 PEAK CID FTMS 0 0 0 6981 3100748.75 0.5292330210133287 1 -0.0186271667480468 1 Unmodified _GLKVREYEL_ ENSG00000142676|ENST00000643754|RPL11;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;nc|ENSG00000142676|P62913-2|RPL11 28.49450938151212 0.124065572374239 2 GKV 3 6 20.947 0.0 0.0 1.8946 0.0 0.0 113.08784850121296 705.3221976182707 818.4100461194837 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 GKV 1.8946 - 26 + 1 1.949 48969.5 1.0 3541 3439 6981 DOHH2_400M_050219_2,6982 DOHH2_400M_050219_2,6982,GLKVREYEL True True GLKVREYEL 37.818859 553.814501941204 108713148.0 6981.0 ENSG00000142676|ENST00000643754|RPL11;;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;;nc|ENSG00000142676|P62913-2|RPL11 5.546746730804443 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6983 37.833 800.0 82570.0 25 0 9992.5 -1 EVRYTVRCIY 10 108 679.8460101333385 1357.677467333477 2 679.8461791872978 MULTI CID FTMS 0 0 0 6981 73770.390625 0.0647271075243438 6 -0.5246047973632812 2 Carbamidomethyl (C) _EVRYTVRC(Carbamidomethyl (C))IY_ ENSG00000125386|ENST00000637812|FAM193A 10.823927491677226 0.6659270209832991 2 {[TV]|[{I|L}S]}GTVVYAD{[SA]|[TG]}{I|L}Y 13 -1 + 60.184 0.0 0.0 4.4328 4.4328 70.092 0.0 0.0 0.0 7.579478642953568 15.780194711291202 7.579478642953568 0.4453125937239832 0 0.8182503180159344 0.958607314841775 1.274227503252014 0.0 {[TV]|[{I|L}S]}GTVVYAD{[SA]|[TG]}{I|L}Y;{[TV]|[{I|L}S]}ASVVYAD{[SA]|[TG]}{I|L}Y;{[TV]|[{I|L}S]}GTVVYAG{[ES]|[DT]|[{I|L}C]}{I|L}Y;{[TV]|[{I|L}S]}ASVVYAG{[ES]|[DT]|[{I|L}C]}{I|L}Y;{[VA]|[{I|L}G]}STVVYAD{[SA]|[TG]}{I|L}Y;{[TV]|[{I|L}S]}GTVVYGE{[SA]|[TG]}{I|L}Y;{[VA]|[{I|L}G]}TSVVYAD{[SA]|[TG]}{I|L}Y;{[TV]|[{I|L}S]}ASVVYGE{[SA]|[TG]}{I|L}Y;{[TV]|[{I|L}S]}GTVVYQ{[ES]|[DT]|[{I|L}C]}{I|L}Y;{[TV]|[{I|L}S]}ASVVYQ{[ES]|[DT]|[{I|L}C]}{I|L}Y 4.4328;4.4;4.2111;4.1783;3.8746;3.8597;3.8418;3.8269;3.7219;3.6891 -;-;-;-;-;-;-;-;-;- 1585 1 1.949 56369.9 0.6100000143051147 3542 3439 6981 DOHH2_400M_050219_2,6983 DOHH2_400M_050219_2,6983,EVRYTVRCIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6985 37.837 63.0 896680.0 25 0 133220.0 + 35854 SVLEKQVSL 9 97 501.7947764028615 1001.574999872523 2 501.7941161990166 MULTI CID FTMS 0 0 0 6984 748209.25 0.7632338907564868 2 -0.2593460083007812 1 Unmodified _SVLEKQVSL_ ENSG00000166037|ENST00000325542|CEP57;ENST00000432815.2_1_1:173332252-173332432:-|nuORF;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;ENST00000541768.1_1_11:95546181-95551118:+|nuORF;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 34.93206674587334 0.1032771302489716 2 [VS]{I|L}AQVS 7 3 57.039 0.0 0.0 5.6949 0.0 0.0 0.0 314.17057917242886 314.17057917242886 32.39786858548108 0.0 0.0 0.0 0 0.8252574989159953 2.0 0.3807196863200844 0.3252574989159953 [VS]{I|L}AQVS 5.6949 - 884 1 1.949 47800.2 1.0 3543 3440 6984 DOHH2_400M_050219_2,6985 DOHH2_400M_050219_2,6985,SVLEKQVSL True True SVLEKQVSL 37.837484 501.794116199017 7796442.5 6984.0 nc|ENSG00000166037|Q86XR8-3|CEP57;;nc|ENSG00000166037|Q86XR8-4|CEP57;;nc|ENSG00000166037|Q86XR8-5|CEP57;;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;;nc|ENSG00000166037|Q86XR8-2|CEP57;;ENSG00000166037|ENST00000325542|CEP57;;ENST00000541768.1_1_11:95546181-95551118:+|nuORF;;ENST00000432815.2_1_1:173332252-173332432:-|nuORF 3.309688687324524 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6986 37.84 95.0 762640.0 25 0 139190.0 5483 DLRTRVVL 8 76 486.3042427082537 970.5939324833074 2 486.3040038943291 MULTI CID FTMS 0 0 0 6984 421730.46875 0.8959433383866364 1 -0.1359405517578125 2 Unmodified _DLRTRVVL_ ENSG00000169919|ENST00000304895|GUSB;ENST00000476486.5_1_7:65444492-65445384:-|nuORF;nc|ENSG00000169919|P08236-2|GUSB;nc|ENSG00000169919|P08236-3|GUSB 26.88365393820708 0.4786498634179528 2 D{I|L}R 3 5 52.505 0.0 0.0 5.4096 0.0 0.0 0.0 583.3587740533811 583.3587740533811 37.900990676322905 0.0 0.0 0.0 0 0.25 2.0 0.0 0.3807196863200844 + D{I|L}R 5.4096 + + 29 + 1 1.949 60529.3 1.0 3544 3440 6984 DOHH2_400M_050219_2,6986 DOHH2_400M_050219_2,6986,DLRTRVVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6987 37.841 84.0 903850.0 25 0 74839.0 + 4746 DEIDAIGGRRF 11 78 416.8818324268155 1247.6236678806465 3 416.8825866580009 MULTI CID FTMS 0 0 0 6984 572449.1875 0.6020733803281486 -1 0.0186271667480468 3 Unmodified _DEIDAIGGRRF_ ENSG00000100519|ENST00000445930|PSMC6 24.95707706330732 0.5062028554934599 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D{M(Oxidation (M))|F} 5 6 26.466 0.0 0.0 2.1213 0.0 0.0 0.0 625.3551063070136 625.3551063070136 14.783474859079387 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D{M(Oxidation (M))|F} 2.1213 - 74 + 1 1.949 67131.1 1.0 3545 3440 6984 DOHH2_400M_050219_2,6987 DOHH2_400M_050219_2,6987,DEIDAIGGRRF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6988 37.844 97.0 637790.0 25 0 49814.0 + 38190 TPRHIIVRF 9 83 380.2328101140902 1137.6766009424707 3 380.2327758669853 MULTI CID FTMS 0 0 0 6984 499077.0625 0.0725628200304106 6 -0.5246009826660156 4 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 18.721224879955976 0.3299216912490967 2 T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}VR 9 2 + 55.75 0.0 0.0 4.9003 4.9003 80.69 0.0 0.0 0.0 34.7807075759896 10.968878562567532 10.968878562567532 7.7815125038364386 0 1.1549471895720984 0.0 0.0 0.0 T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}VR;T[RP]H{I|L}{M(Oxidation (M))|F}{I|L}VR 4.9003;4.2163 -;- 99 + 1 1.949 56879.0 1.0 3546 3440 6984 DOHH2_400M_050219_2,6988 DOHH2_400M_050219_2,6988,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 6989 37.846 143.0 978520.0 25 0 116700.0 + -1 GLKVANMLN 9 128 488.2662725530053 974.5179921728106 2 488.2665893435478 MULTI CID FTMS 0 0 0 6984 436783.96875 0.5198132521987886 2 -0.2593460083007812 5 Oxidation (M) _GLKVANM(Oxidation (M))LN_ REV__ENST00000399604.4_1_17:5084193-5085186:-|nuORF 21.74664581756881 0.2544899275067181 2 {[VA]|[{I|L}G]}KVE 5 -1 47.619 0.0 0.0 4.8865 0.0 0.0 0.0 445.1837252252563 445.1837252252563 11.121506059964544 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.3494850021680094 {[VA]|[{I|L}G]}KVE 4.8865 - 1041 + 1 1.949 109967.9 1.0 3547 3440 6984 DOHH2_400M_050219_2,6989 DOHH2_400M_050219_2,6989,GLKVANMLN False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6990 37.85 185.0 585250.0 25 0 124120.0 + 4748 DEIDAIGGRRF 11 61 624.8204771422469 1247.6264013512937 2 624.8209716677666 MULTI CID FTMS 0 0 0 6984 325146.59375 0.7259285952498231 -1 0.0186271667480468 6 Unmodified _DEIDAIGGRRF_ ENSG00000100519|ENST00000445930|PSMC6 43.476825903602695 0.1588371419577413 2 DE{I|L}D{M(Oxidation (M))|F} 5 6 67.423 0.0 0.0 5.4041 0.0 0.0 0.0 625.3541643733003 625.3541643733003 26.27636252551653 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.4247425010840047 0.0 DE{I|L}D{M(Oxidation (M))|F} 5.4041 - 96 + 1 1.949 84001.6 1.0 3548 3440 6984 DOHH2_400M_050219_2,6990 DOHH2_400M_050219_2,6990,DEIDAIGGRRF False True DEIDAIGGRRF 37.849979 624.820971667767 9274778.0 6984.0 ENSG00000100519|ENST00000445930|PSMC6 5.636194864908855 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6991 37.854 221.0 278210.0 25 0 22468.0 + 32699 SEAELMRSM 9 95 527.2381678753119 1052.4617828174237 2 527.2384521365166 MULTI CID FTMS 0 0 0 6984 207770.359375 1.0 0 0.0 7 Unmodified _SEAELMRSM_ ENSG00000137574|ENST00000260129|TGS1;ENST00000523948.5_1_8:56686169-56737149:+|nuORF 47.594388314883695 0.0456443387682827 2 {[ES]|[DT]|[{I|L}C]}AE{I|L}MR{[MS]|[{M(Oxidation (M))|F}A]} 9 0 + 55.652 0.0 0.0 5.2878 5.2878 82.549 0.0 0.0 0.0 37.068715476696354 3.2568864632742844 3.2568864632742844 8.34632606336092 0 1.424742501084005 0.0 0.3494850021680094 0.3807196863200844 + + {[ES]|[DT]|[{I|L}C]}AE{I|L}MR{[MS]|[{M(Oxidation (M))|F}A]};{[ES]|[DT]|[{I|L}C]}AE{I|L}M{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[DP]{I|L}MR{[MS]|[{M(Oxidation (M))|F}A]};{[CP]|[EA]}[WH]{I|L}[DP]W;{[CT]|[{M(Oxidation (M))|F}G]}[DP]{I|L}M{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L};{[CP]|[EA]}{I|L}[WH][DP]W;{[CT]|[{M(Oxidation (M))|F}G]}T[HS]MR{[MS]|[{M(Oxidation (M))|F}A]};{[ES]|[DT]|[{I|L}C]}ATH[YK]{[MS]|[{M(Oxidation (M))|F}A]};{[CP]|[EA]}[WH]HSTW;{[CP]|[EA]}{I|L}[DV][YG]TW 5.2878;4.4948;2.224;1.68;1.431;1.394;1.2484;1.1902;1.0783;0.46181 +;-;-;-;-;-;-;-;-;- + 150 + 1 1.949 57649.0 1.0 3549 3440 6984 DOHH2_400M_050219_2,6991 DOHH2_400M_050219_2,6991,SEAELMRSM True True SEAELMRSM 37.854152 527.238452136517 1009079.1875 6984.0 ENSG00000137574|ENST00000260129|TGS1;;ENST00000523948.5_1_8:56686169-56737149:+|nuORF 1.2292154878377914 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 6992 37.86 296.0 321350.0 25 0 61817.0 + 23169 LSQTSSKPL 9 94 480.772198007412 0 480.7723266482353 PEAK CID FTMS 0 0 0 6984 153806.375 0.8029958386778788 1 -0.1359405517578125 8 Unmodified _LSQTSSKPL_ REV__ENSG00000161996|ENST00000293879|WDR90;REV__ENST00000420061.6_1_16:699416-706047:+|nuORF;REV__ENST00000549648.5_1_16:699416-706047:+|nuORF;REV__ENST00000552943.5_1_16:699416-703842:+|nuORF;REV__nc|ENSG00000161996|Q96KV7-3|WDR90;REV__nc|ENSG00000161996|Q96KV7-5|WDR90 14.838274106304384 0.2567717476666951 2 SGQG 4 -1 8.1361 0.0 0.0 0.84792 0.0 0.0 545.3102823900209 82.06686578922108 627.377148179242 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SGQG 0.84792 - 91 + 1 1.949 79843.4 1.0 3550 3440 6984 DOHH2_400M_050219_2,6992 DOHH2_400M_050219_2,6992,LSQTSSKPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6993 37.868 500.0 217870.0 25 0 29796.0 + -1 SMDEKVELY 9 130 565.2577321805211 1128.500911427842 2 565.2578613162041 MULTI CID FTMS 0 0 0 6984 134684.234375 1.0 0 0.0 9 Oxidation (M) _SM(Oxidation (M))DEKVELY_ ENSG00000131143|ENST00000253452|COX4I1 38.61474834105838 0.0830609365873449 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DE[R{I|L}]S{I|L}Y 9 -1 + 53.389 0.0 0.0 4.731 4.731 84.39 0.0 0.0 0.0 7.147642715192504 36.39969987625378 7.147642715192504 12.375437381428751 0 1.8494850021680087 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DE[R{I|L}]S{I|L}Y;{[QN]|[E{I|L}]|[KN]}[QT]ES{M(Oxidation (M))|F}{I|L}Y;{[QN]|[E{I|L}]|[KN]}[QT]E{M(Oxidation (M))|F}S{I|L}Y;{[QN]|[E{I|L}]|[KN]}[QT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}KDES{M(Oxidation (M))|F}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}KDE{M(Oxidation (M))|F}S{I|L}Y;{[QN]|[E{I|L}]|[KN]}V[WC(Carbamidomethyl (C))]{M(Oxidation (M))|F}{I|L}Y;{[QN]|[E{I|L}]|[KN]}V[SG]DS{M(Oxidation (M))|F}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}KD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{[QS]|[NT]}[RN]{I|L}Y 4.731;3.6344;3.4378;3.2665;3.2569;3.0603;3.0174;3.0174;2.889;2.8303 -;-;-;-;-;-;-;-;-;- 1109 1 1.949 82911.3 1.0 3551 3440 6984 DOHH2_400M_050219_2,6993 DOHH2_400M_050219_2,6993,SMDEKVELY False False SMDEKVELY 37.868402 565.257861316204 911697.4375 6984.0 ENSG00000131143|ENST00000253452|COX4I1 7.839590549468994 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6994 37.875 341.0 212600.0 25 0 22934.0 + 12003 GPKMIVGAP 9 111 435.2510543401133 868.4875557470267 2 435.2513305544853 MULTI CID FTMS 0 0 0 6984 114132.15625 0.1889909334542137 -9 0.8280830383300781 10 Unmodified _GPKMIVGAP_ REV__ENST00000469042.5_1_3:132298334-132378619:-|nuORF;REV__ENST00000489991.1_1_3:132349350-132378619:-|nuORF 2.059750862983233 0.8427793054688888 2 P 1 -1 8.3277 0.0 0.0 0.95888 0.0 0.0 753.4237949211463 0.0 753.4237949211463 0.0 8.327731244245346 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.95888 + + 15 + 1 1.949 60238.0 1.0 3552 3440 6984 DOHH2_400M_050219_2,6994 DOHH2_400M_050219_2,6994,GPKMIVGAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 6995 37.878 167.0 535180.0 25 0 90346.0 11597 GKSRLLEL 8 90 458.2844327743187 914.5543126154374 2 458.2843810915947 MULTI CID FTMS 0 0 0 6984 88677.7890625 0.928849550483166 1 -0.1359405517578125 11 Unmodified _GKSRLLEL_ ENST00000334690.10_1_4:184580422-184585007:+|nuORF 30.63653989081413 0.3996269429323407 2 {[NV]|[RG]}{I|L}[KS]{I|L}E{I|L} 8 4 + 32.611 0.0 0.0 3.5658 3.5658 79.365 0.0 0.0 0.0 4.674165578762484 14.86880000633434 4.674165578762484 9.51544993495972 0 0.3252574989159953 0.0 0.3494850021680094 0.0 {[NV]|[RG]}{I|L}[KS]{I|L}E{I|L};{[NV]|[RG]}{I|L}{I|L}[KS]E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KG]{I|L}{I|L}E{I|L};{I|L}{I|L}{[DS]|[MA]|[CV]|TT}{I|L}{I|L}E{I|L};{I|L}{M(Oxidation (M))|F}[KS][KP][VP] 3.5658;2.5253;1.8342;1.3558;0.069974 -;-;-;-;- 153 1 1.949 72888.8 1.0 3553 3440 6984 DOHH2_400M_050219_2,6995 DOHH2_400M_050219_2,6995,GKSRLLEL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6996 37.892 800.0 102940.0 25 0 7294.9 -1 0 94 881.9119343069236 1761.8093156806472 2 881.9138671755791 MULTI CID FTMS 0 0 0 6984 102666.96875 0.4147849003000974 7 -0.6145896911621094 12 2 SDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 48.166 0.0 0.0 2.7339 0.0 0.0 789.4162464826187 0.0 789.4162464826187 0.0 28.367216912203418 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.8494850021680094 SDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.7339 - 369 1 1.949 60955.0 0.5699999928474426 3554 3440 6984 DOHH2_400M_050219_2,6996 DOHH2_400M_050219_2,6996, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 6997 37.905 800.0 165110.0 25 0 13139.0 + 28848 QAGPRGLAL 9 156 441.7613037231277 881.5080545130554 2 441.7613098025322 MULTI CID FTMS 0 0 0 6984 100903.3359375 0.7906369016373623 -1 0.0186271667480468 13 Unmodified _QAGRLQPL_ ENSG00000065268|ENST00000585809|WDR18 44.40701690623563 0.1655546087385432 2 QA{I|L}K[Y{M(Oxidation (M))|F}]{I|L} 7 5 + 52.484 0.0 0.0 5.9539 5.9539 78.657 0.0 0.0 0.0 23.9840322369416 10.54068199846057 10.54068199846057 2.247585925944186 0 1.1549471895720984 1.3979400086720375 0.0 0.0 QA{I|L}K[Y{M(Oxidation (M))|F}]{I|L};QAG{I|L}A{[NV]|[RG]}P{I|L};QA[Q{I|L}]{[NV]|[RG]}P{I|L};QAG{I|L}A{[NV]|[RG]}{I|L}P;[AG]Q{I|L}A{[NV]|[RG]}P{I|L};QA[Q{I|L}]{[NV]|[RG]}{I|L}P;[AG]Q{I|L}A{[NV]|[RG]}{I|L}P 5.9539;5.6989;4.9578;3.7506;3.2253;3.0094;1.2769 -;-;-;-;-;-;- 392 + 1 1.949 106053.7 0.4600000083446502 3555 3440 6984 DOHH2_400M_050219_2,6997 DOHH2_400M_050219_2,6997,QAGRLQPL False False QAGPRGLAL 37.9055 441.761309802532 954744.375 6984.0 ENSG00000065268|ENST00000585809|WDR18 5.2426596482594805 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 6998 37.912 270.0 310430.0 25 0 36560.0 5476 DLRTASIAV 9 119 473.2723835511152 944.5302141690304 2 473.2736999392509 MULTI CID FTMS 0 0 0 6984 104591.9140625 0.452400257306318 -1 0.0186271667480468 14 Unmodified _DLRTASIAV_ ENST00000423186.1_7:74304473-74306652:-|nuORF;ENST00000423834.6_1_7:72474205-72476389:-|nuORF;ENST00000448173.5_1_7:72474205-72476389:-|nuORF;ENST00000470714.5_1_7:99933771-99935846:+|nuORF;ENST00000473757.5_1_7:99933771-99935846:+|nuORF 27.628801355627647 0.1796483985696185 2 {NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}TS{I|L}AV 9 2 + 47.707 0.0 0.0 5.0509 5.0509 86.701 0.0 0.0 0.0 8.026972851230774 32.08864871462839 8.026972851230774 15.81228618911186 0 0.5 1.6989700043360187 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}TS{I|L}AV;{NN|[MP]|[D{I|L}]|[EV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]AV;{[TV]|[{I|L}S]}[VS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AV;[{I|L}A][RD]TS{I|L}AV;{[ES]|[DT]|[{I|L}C]}[RV]S[TP]AV;{[ES]|[DT]|[{I|L}C]}QQ[RK]AV;[TA][{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AV;{[CT]|[{M(Oxidation (M))|F}G]}[R{I|L}][WP]AV;{[ES]|[DT]|[{I|L}C]}[RV]S[TP]G{I|L};{[ES]|[DT]|[{I|L}C]}QQ[RK]G{I|L} 5.0509;3.3768;3.1096;2.5309;2.3842;2.0942;2.0508;2.0253;1.2789;0.98885 -;-;-;-;-;-;-;-;-;- 294 1 1.949 68341.8 1.0 3556 3440 6984 DOHH2_400M_050219_2,6998 DOHH2_400M_050219_2,6998,DLRTASIAV False True SLREASLAV 37.911652 473.273699939251 1362856.25 6984.0 ENST00000273395.8_2_3:112931414-112931489:+|nuORF 0.1827072718491157 2.0 False 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 6999 37.925 800.0 202800.0 25 0 19046.0 38193 TPRHIIVRF 9 154 569.8456898327325 1137.676826732265 2 569.8464233279228 MULTI CID FTMS 0 0 0 6984 96052.03125 0.0737644311096157 6 -0.5246009826660156 15 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 25.997395711884035 0.2004055669077203 2 TPRH{I|L}{I|L}[RV]{M(Oxidation (M))|F} 9 0 + 21.504 0.0 0.0 1.8901 1.8901 77.589 0.0 0.0 0.0 4.760006596438188 3.5448163530067163 3.5448163530067163 13.161927004360235 0 1.670017468983572 0.431798275933005 0.0 0.0 + + TPRH{I|L}{I|L}[RV]{M(Oxidation (M))|F};[TP]RH{I|L}{I|L}[RV]{M(Oxidation (M))|F} 1.8901;0.73322 +;+ + 277 + 1 1.949 125522.4 0.5 3557 3440 6984 DOHH2_400M_050219_2,6999 DOHH2_400M_050219_2,6999,TPRHIIVRF False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 7000 37.939 800.0 89481.0 25 0 6285.4 -1 0 88 865.8985985942385 1729.7826442552769 2 865.8997680544853 MULTI CID FTMS 0 0 0 6984 92032.4921875 0.2962033528761209 5 -0.5059776306152344 16 2 DAN{I|L}DP{[QN]|[E{I|L}]|[KN]} 8 -1 49.87 0.0 0.0 2.883 0.0 0.0 844.4183828667435 0.0 844.4183828667435 0.0 32.013356515246514 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.4247425010840047 DAN{I|L}DP{[QN]|[E{I|L}]|[KN]} 2.883 - 131 1 1.949 53447.8 0.449999988079071 3558 3440 6984 DOHH2_400M_050219_2,7000 DOHH2_400M_050219_2,7000, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7001 37.946 313.0 254170.0 25 0 35878.0 -1 0 134 398.23009292118985 397.22281645458986 1 398.2309142947197 MULTI CID FTMS 0 0 0 6984 92722.015625 0.1497258151115309 7 -0.6145896911621094 17 2 W 1 -1 12.474 0.0 0.0 3.1404 0.0 0.0 193.1324977063461 0.0 193.1324977063461 0.0 2.095646538709879 0.0 0.0 0 0.0 0.0 0.0 0.0 W 3.1404 - 6 + 1 1.949 65004.7 1.0 3559 3440 6984 DOHH2_400M_050219_2,7001 DOHH2_400M_050219_2,7001, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7002 37.955 485.0 208810.0 25 0 11095.0 + 33018 SENYRIMSY 9 134 581.7614166331355 1161.5082803330708 2 581.7634765505791 MULTI CID FTMS 0 0 0 6984 78671.6953125 0.9271238481012284 1 -0.1359405517578125 18 Unmodified _SENYRIMSY_ ENSG00000166483|ENST00000450114|WEE1;nc|ENSG00000166483|P30291-2|WEE1 43.9818466556824 0.0535980856389242 2 {[ES]|[DT]|[{I|L}C]}NYT[{I|L}V]SSY 10 3 + 52.215 0.0 0.0 4.4955 4.4955 81.506 0.0 0.0 0.0 32.21143466090822 16.532125137753432 16.532125137753432 9.208187539523747 0 1.2614393726401687 0.0 0.3494850021680094 0.3252574989159953 {[ES]|[DT]|[{I|L}C]}NYT[{I|L}V]SSY;{[ES]|[DT]|[{I|L}C]}N[HN][KP]SSY;{[ES]|[DT]|[{I|L}C]}GGYT[{I|L}V]SSY;{[ES]|[DT]|[{I|L}C]}NYT{[DS]|[MA]|[CV]|TT}A{I|L}Y;{[ES]|[DT]|[{I|L}C]}NN{[QG]|[NA]}[HT]{I|L}Y;{[ES]|[DT]|[{I|L}C]}N[HM][TP]A{I|L}Y;{[ES]|[DT]|[{I|L}C]}NN[PG][TP]A{I|L}Y;{[ES]|[DT]|[{I|L}C]}N[HN]{[QS]|[NT]}A{I|L}Y;[HM]M{[ET]|[MV]}[HT]{I|L}Y;{[ES]|[DT]|[{I|L}C]}N{[CT]|[{M(Oxidation (M))|F}G]}[YV]A{I|L}Y 4.4955;3.7027;3.4264;3.0107;2.6681;2.3255;2.2217;2.2179;2.1876;2.0087 -;-;-;-;-;-;-;-;-;- 762 + 1 1.949 80127.9 1.0 3560 3440 6984 DOHH2_400M_050219_2,7002 DOHH2_400M_050219_2,7002,SENYRIMSY True True SENYRIMSY 37.954796 581.763476550579 323547.625 6984.0 nc|ENSG00000166483|P30291-2|WEE1;;ENSG00000166483|ENST00000450114|WEE1 7.50533660252889 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7003 37.969 800.0 159890.0 25 0 8489.5 + -1 FRFWRCDCRWR 11 113 872.9071255739927 1743.7996982147854 2 872.9075805544853 MULTI CID FTMS 0 0 0 6984 78946.2890625 0.6374730338994566 -1 0.0186271667480468 19 2 Carbamidomethyl (C) _FRFWRC(Carbamidomethyl (C))DC(Carbamidomethyl (C))RWR_ REV__ENST00000602980.1_1_7:29725056-29725440:+|nuORF 0.0 0.8751479354844584 2 [NP]{I|L}NQ[WY]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 14 -1 + 70.24 0.0 0.0 4.028 4.028 68.068 0.0 0.0 0.0 9.16019871070607 47.68005550264913 9.16019871070607 0.1223445641701346 0 1.274227503252014 0.8860566476931632 0.0 0.8494850021680094 [NP]{I|L}NQ[WY]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}[TP]{[HG]|PP}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[TA]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGQ[WY]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[AG][WY]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NQ[WY]EGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NQ[WY]EN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{[WT]|[RM]}[TA]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NQ[WY]EN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.028;4.021;3.5192;3.509;3.509;3.509;3.509;2.9918;2.8646;2.5951 -;-;-;-;-;-;-;-;-;- 556 1 1.949 90188.0 0.3600000143051147 3561 3440 6984 DOHH2_400M_050219_2,7003 DOHH2_400M_050219_2,7003,FRFWRCDCRWR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7005 37.974 65.0 746080.0 25 0 44914.0 + 40791 VLLKARLVPA 10 78 360.58150946828266 1078.722699005048 3 360.5815307497978 MULTI CID FTMS 0 0 0 7004 596109.5625 0.2435210688201519 2 -0.2019233703613281 1 Unmodified _VLLKARLVPA_ ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B 16.565877749689598 0.5695826726197942 2 [DV]V{I|L} 4 8 31.682 0.0 0.0 2.937 0.0 0.0 0.0 649.4523180292693 649.4523180292693 20.71333751784365 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [DV]V{I|L} 2.937 - 16 + 1 1.949 51702.7 1.0 3562 3441 7004 DOHH2_400M_050219_2,7005 DOHH2_400M_050219_2,7005,VLLKARLVPA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7006 37.976 89.0 558400.0 25 0 44296.0 -1 YLFYCKNCRFY 11 70 788.8549023906082 1575.6952518480164 2 788.8557617068291 MULTI CID FTMS 0 0 0 7004 496605.21875 0.6013223943695335 1 -0.1234054565429687 2 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 2 AQQNA{M(Oxidation (M))|F}Y 7 -1 49.156 0.0 0.0 3.1197 0.0 0.0 735.3192616193375 0.0 735.3192616193375 0.0 35.17683537374076 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.8494850021680094 AQQNA{M(Oxidation (M))|F}Y 3.1197 - 163 1 1.949 43585.6 1.0 3563 3441 7004 DOHH2_400M_050219_2,7006 DOHH2_400M_050219_2,7006,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7007 37.977 14.0 5556500.0 25 0 950390.0 + 24482 MIEPRTLQY 9 73 575.7994555006755 1149.584358068151 2 575.8001586794853 MULTI CID FTMS 0 0 0 7004 3921066.5 0.1268241948902586 -2 0.1545677185058593 3 Unmodified _MIEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 44.391923383255 0.0526658857881241 2 M{I|L}E[TP]R{I|L}QY 9 2 + 80.869 0.0 0.0 7.0346 7.0346 93.937 0.0 0.0 0.0 46.88424994129406 14.09256854528806 14.09256854528806 18.26606256887672 0 2.004432191740108 2.0 0.4247425010840047 0.8494850021680094 M{I|L}E[TP]R{I|L}QY;M{I|L}[QA]QR{I|L}QY;M{I|L}[Y{M(Oxidation (M))|F}]Q[RP][VP];[{I|L}T][RP]QE{I|L}MY;[RP][{I|L}T]QE{I|L}MY;[RP][WR]E{I|L}MY;[{I|L}T][RP]QT[SG]QY;[{I|L}T][RP][AG]E{I|L}MY;[RP][{I|L}T]QT[SG]QY;[RP][{I|L}T][AG]E{I|L}MY 7.0346;5.4457;3.9228;3.0596;2.9509;2.3874;2.3401;2.2586;2.2314;2.1499 -;-;-;-;-;-;-;-;-;- 171 + 1 1.949 60639.3 1.0 3564 3441 7004 DOHH2_400M_050219_2,7007 DOHH2_400M_050219_2,7007,MIEPRTLQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7008 37.978 73.0 710390.0 25 0 49190.0 + 11269 GETSYIRVY 9 77 544.2744667547832 1086.5343805763664 2 544.2747680544853 MULTI CID FTMS 0 0 0 7004 688496.625 0.4834922744437793 -1 0.1359405517578125 4 Unmodified _GETSYIRVY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 53.832793166522166 0.0319663582346103 2 {[DA]|[EG]}TSY{I|L}RVY 9 0 + 80.908 0.0 0.0 7.4464 7.4464 97.255 0.0 0.0 0.0 68.82962806725317 12.98332479720628 12.98332479720628 80.90797194541551 0 1.424742501084005 1.6989700043360187 0.0 0.3807196863200844 + + {[DA]|[EG]}TSY{I|L}RVY 7.4464 + + 68 + 1 1.949 46655.8 1.0 3565 3441 7004 DOHH2_400M_050219_2,7008 DOHH2_400M_050219_2,7008,GETSYIRVY True True GETSYIRVY 37.978462 544.274768054485 17581286.0 7004.0 ENST00000603963.1_1_12:120899824-120902572:-|nuORF;;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;;ENSG00000111786|ENST00000229390|SRSF9 6.137221018473308 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7009 37.981 93.0 895490.0 25 0 133480.0 + 43984 YIDEQFERY 9 65 631.7879139297086 1261.561274926217 2 631.7881957888603 MULTI CID FTMS 0 0 0 7004 614343.9375 0.1474785474630066 -1 0.1359405517578125 5 Unmodified _YIDEQFERY_ ENSG00000168385|ENST00000391971|SEPTIN2;ENST00000467971.5_1_2:242255375-242276932:+|nuORF;ENST00000484167.5_1_2:242276764-242276932:+|nuORF;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2 63.960520009940105 0.0238892913700936 2 Y{I|L}DEQ{M(Oxidation (M))|F}E[YR] 9 0 + 106.48 0.0 0.0 8.44 8.44 93.007 0.0 0.0 0.0 97.17925002484726 8.123468415207498 8.123468415207498 9.208187539523747 0 0.9247425010840048 2.0 0.7614393726401688 1.1989700043360187 + + Y{I|L}DEQ{M(Oxidation (M))|F}E[YR];Y{I|L}DE[AG]{M(Oxidation (M))|F}E[YR];Y{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}EEE[YR];Y[{M(Oxidation (M))|F}V]QEEE[YR] 8.44;7.7101;4.3942;1.4555 +;-;-;- + 245 + 1 1.949 70430.5 1.0 3566 3441 7004 DOHH2_400M_050219_2,7009 DOHH2_400M_050219_2,7009,YIDEQFERY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7010 37.984 154.0 343310.0 25 0 19106.0 -1 FYEWECKQRMR 11 79 824.8711215474099 1647.7276901616196 2 824.8716308474541 MULTI CID FTMS 0 0 0 7004 368019.9375 0.4775701399225791 1 -0.1234054565429687 6 Carbamidomethyl (C),Oxidation (M) _FYEWEC(Carbamidomethyl (C))KQRM(Oxidation (M))R_ ENSG00000120658|ENST00000690772|ENOX1;nc|ENSG00000120658|Q8TC92-2|ENOX1 1.4819007175156935 0.86815623132643 2 AQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 9 -1 61.119 0.0 0.0 3.7093 0.0 0.0 580.22563368965 0.0 580.22563368965 0.0 18.436395961864527 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 AQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 3.7093 - 857 1 1.949 43136.7 1.0 3567 3441 7004 DOHH2_400M_050219_2,7010 DOHH2_400M_050219_2,7010,FYEWECKQRMR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7011 37.986 141.0 384330.0 25 0 30506.0 + 43335 WLTQKQTL 8 96 509.2884696314354 1016.5623863296707 2 509.2900878787041 MULTI CID FTMS 0 0 0 7004 347789.28125 1.0 0 0.0 7 Unmodified _WLTQKQTL_ ENSG00000266412|ENST00000581486|NCOA4;nc|ENSG00000266412|Q13772-2|NCOA4;nc|ENSG00000266412|Q13772-3|NCOA4;nc|ENSG00000266412|Q13772-4|NCOA4 57.47134341890925 0.1146309765603773 2 [W{I|L}]TQ[KQ]T{I|L} 8 0 + 56.23 0.0 0.0 5.5313 5.5313 86.388 0.0 0.0 0.0 21.57726412454497 12.71271006008984 12.71271006008984 9.262137858390815 0 0.805462187404089 2.0 1.5021934810768762 0.0 + + [W{I|L}]TQ[KQ]T{I|L};[W{I|L}]T[AG][KQ]T{I|L};[W{I|L}]TQ[RK]W;[W{I|L}][VS]{I|L}T{I|L}W;[W{I|L}]TVVT{I|L}W;[W{I|L}][VS]T{I|L}{I|L}W;[W{I|L}]T[VS]{I|L}{I|L}W;[QT]KQ{I|L}T{I|L}W;[W{I|L}]T[AG][RK]W;[W{I|L}][W{I|L}]T{I|L}W 5.5313;4.6202;4.2808;4.0895;3.8479;3.7933;3.5518;3.3678;3.3629;3.139 +;-;-;-;-;-;-;-;-;- + 493 + 1 1.949 46862.0 1.0 3568 3441 7004 DOHH2_400M_050219_2,7011 DOHH2_400M_050219_2,7011,WLTQKQTL True True WLTQKQTL 37.986414 509.290087878704 2140248.5 7004.0 nc|ENSG00000266412|Q13772-3|NCOA4;;ENSG00000266412|ENST00000581486|NCOA4;;nc|ENSG00000266412|Q13772-4|NCOA4;;nc|ENSG00000266412|Q13772-2|NCOA4 5.114533185958862 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7012 37.988 94.0 720620.0 25 0 74532.0 + 11175 GELPSERW 8 95 487.2407470722893 972.4669412113786 2 487.2407104372978 MULTI CID FTMS 0 0 0 7004 348298.3125 1.0 0 0.0 8 Unmodified _GELPSERW_ ENSG00000099804|ENST00000215574|CDC34;ENSG00000107341|ENST00000263228|UBE2R2;ENST00000586788.1_1_19:531880-536341:+|nuORF 21.53697664764585 0.591232569029014 2 {[DA]|[EG]}{I|L}PC 5 4 40.273 0.0 0.0 4.1413 0.0 0.0 0.0 470.23935877017817 470.23935877017817 28.48992045677184 0.0 0.0 0.0 0 1.0 1.154901959985743 0.0 0.0 {[DA]|[EG]}{I|L}PC 4.1413 - 246 + 1 1.949 58075.6 1.0 3569 3441 7004 DOHH2_400M_050219_2,7012 DOHH2_400M_050219_2,7012,GELPSERW False True GELPSERW 37.988474 487.240710437298 2024437.875 7004.0 ENSG00000099804|ENST00000215574|CDC34;;ENSG00000107341|ENST00000263228|UBE2R2;;ENST00000586788.1_1_19:531880-536341:+|nuORF 4.269637584686279 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7013 37.991 105.0 488980.0 25 0 68578.0 + 27968 PLVSPLEA 8 86 413.238996635502 824.463440337804 2 413.2395202517509 MULTI CID FTMS 0 0 0 7004 285149.375 0.6014279463050639 5 -0.3886604309082031 9 Unmodified _PLVSPLEA_ REV__ENSG00000107186|ENST00000319217|MPDZ;REV__ENST00000539508.5_1_9:13136054-13190160:-|nuORF;REV__nc|ENSG00000107186|O75970-2|MPDZ;REV__nc|ENSG00000107186|O75970-3|MPDZ;REV__nc|ENSG00000107186|O75970-5|MPDZ 0.7936320650641473 0.8195151834710337 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.949 46333.0 1.0 3570 3441 7004 DOHH2_400M_050219_2,7013 DOHH2_400M_050219_2,7013,PLVSPLEA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7014 37.995 250.0 460350.0 25 0 39680.0 + 1286 AIQEHPVVL 9 122 503.2896748871678 1004.5647968411356 2 503.2894164919853 MULTI CID FTMS 0 0 0 7004 273889.78125 1.0 0 0.0 10 Unmodified _AIQEHPVVL_ ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT 62.57269311338072 0.0246576765497938 2 [{I|L}A]QEHPVV{I|L} 9 0 + 61.647 0.0 0.0 6.1367 6.1367 82.036 0.0 0.0 0.0 14.177805497702993 16.478174818886373 14.177805497702993 4.476212463643421 0 1.7544321917401078 2.0 0.0 0.0 + + [{I|L}A]QEHPVV{I|L};[{I|L}A]Q{[YD]|[{M(Oxidation (M))|F}M]}V{I|L}A{I|L};[{I|L}A][AG]EHPVV{I|L};[{I|L}A]M{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}A{I|L};[{I|L}A][YR]{[DA]|[EG]}{I|L}A{I|L};{[YC]|[HE]}Q[{I|L}A]PVV{I|L};[{I|L}A][YR][DG]VV{I|L};{[YC]|[HE]}Q[VP]V{I|L}A{I|L};[{I|L}A]Q{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}A]V{I|L};[VP]HEQV{I|L}A{I|L} 6.1367;5.6911;5.2201;5.0891;4.7718;4.7254;4.6447;4.4778;4.4721;4.2378 +;-;-;-;-;-;-;-;-;- + 1217 1 1.949 90726.1 1.0 3571 3441 7004 DOHH2_400M_050219_2,7014 DOHH2_400M_050219_2,7014,AIQEHPVVL True True AIQEHPVVL 37.995358 503.289416491985 2148249.25 7004.0 ENSG00000116906|ENST00000366647|GNPAT;;nc|ENSG00000116906|O15228-2|GNPAT 6.594669342041016 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7015 38.009 800.0 285230.0 25 0 14131.0 + -1 KEKDERILW 9 182 608.7418427627676 1215.4691325923352 2 608.7418701052666 MULTI CID FTMS 0 0 0 7004 271050.59375 1.0 0 0.0 11 Carbamidomethyl (C),Oxidation (M) _ESNFM(Oxidation (M))QRC(Carbamidomethyl (C))E_ ENSG00000114850|ENST00000265044|SSR3;ENST00000467733.1_1_3:156262080-156272878:-|nuORF;ENST00000498205.5_1_3:156260994-156266845:-|nuORF 21.53697664764585 0.2571576504437394 2 {[ES]|[DT]|[{I|L}C]}NVDNDN{M(Oxidation (M))|F}Y 10 -1 + 44.518 0.0 0.0 3.6627 3.6627 73.862 0.0 0.0 0.0 23.788208981383647 0.3246091534035145 0.3246091534035145 5.593080109070115 0 1.5044321917401078 0.0 0.0 0.6109243748081782 {[ES]|[DT]|[{I|L}C]}NVDNDN{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}NVDNDNY{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NVDNC(Carbamidomethyl (C))MT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NVDGGDN{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}GGVDNDN{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}GGVDNDNY{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NVDGGDNY{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGVDNC(Carbamidomethyl (C))MT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NVDGGC(Carbamidomethyl (C))MT{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}[YC(Carbamidomethyl (C))][NP]H{M(Oxidation (M))|F}Y 3.6627;3.2025;3.024;2.9087;2.9087;2.4485;2.4485;2.27;2.055;0.77457 -;-;-;-;-;-;-;-;-;- 1056 + 1 1.949 167842.8 0.9700000286102296 3572 3441 7004 DOHH2_400M_050219_2,7015 DOHH2_400M_050219_2,7015,ESNFMQRCE False False KEKDERILW 38.009195 608.741870105267 644225.3125 7004.0 ENSG00000114850|ENST00000265044|SSR3;;ENST00000467733.1_1_3:156262080-156272878:-|nuORF;;ENST00000498205.5_1_3:156260994-156266845:-|nuORF 2.137076338132222 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7016 38.018 474.0 413570.0 25 0 33988.0 + 40794 VLLKARLVPA 10 139 540.368746999787 1078.722941066374 2 540.3685180544853 MULTI CID FTMS 0 0 0 7004 245230.578125 0.2671755786266578 2 -0.2019233703613281 12 Unmodified _VLLKARLVPA_ ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B 71.70789743142352 0.0188816056000227 2 V{I|L}{I|L}KAR{I|L}VAP 10 2 + 51.098 0.0 0.0 4.7369 4.7369 78.431 0.0 0.0 0.0 22.716303573407583 5.589866794433405 5.589866794433405 6.237125054200234 0 1.7231975075880328 1.5228787452803376 0.0 0.0 V{I|L}{I|L}KAR{I|L}VAP;V{I|L}{I|L}KA[{I|L}V]RAP;V{I|L}{I|L}KAR{I|L}AVP;V{I|L}{I|L}KAR{I|L}[PG]{I|L} 4.7369;4.1587;3.0987;3.0276 -;-;-;- 1106 + 1 1.949 152815.9 1.0 3573 3441 7004 DOHH2_400M_050219_2,7016 DOHH2_400M_050219_2,7016,VLLKARLVPA True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7017 38.026 482.0 261670.0 25 0 25985.0 + 13091 HEIEALKSF 9 142 537.2854535650497 1072.5563541968993 2 537.2855102419853 MULTI CID FTMS 0 0 0 7004 170603.03125 1.0 0 0.0 13 Unmodified _HEIEALKSF_ ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC 84.5221896805406 0.0164210731287474 2 {[YC]|[HE]}{I|L}EA{I|L}KS{M(Oxidation (M))|F} 9 0 + 74.28 0.0 0.0 6.9255 6.9255 93.815 0.0 0.0 0.0 7.638918350167216 59.63390693883396 7.638918350167216 19.02668842303273 0 1.7302046884880935 0.0 1.7134679910804405 0.0 + + {[YC]|[HE]}{I|L}EA{I|L}KS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}HEA{I|L}KS{M(Oxidation (M))|F};{[YC]|[HE]}{[CP]|[EA]}{I|L}{I|L}KS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HA]H{I|L}KS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HHA{I|L}KS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[MT]{I|L}{I|L}KS{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}[TA]{I|L}RS{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}EH{I|L}KS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AEH{I|L}KS{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}ERRS{M(Oxidation (M))|F} 6.9255;5.1515;5.0809;4.6262;4.6262;4.5523;4.5498;4.5097;4.4034;4.1797 +;-;-;-;-;-;-;-;-;- + 1461 1 1.949 97040.9 1.0 3574 3441 7004 DOHH2_400M_050219_2,7017 DOHH2_400M_050219_2,7017,HEIEALKSF True True HEIEALKSF 38.02612 537.285510241985 994733.9375 7004.0 nc|ENSG00000078618|O43847-2|NRDC;;ENSG00000078618|ENST00000352171|NRDC 5.871709028879802 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7018 38.029 150.0 347300.0 25 0 35086.0 + 34710 SPWGKHVF 8 98 479.2502689232866 956.4859849133732 2 479.2506286501884 MULTI CID FTMS 0 0 0 7004 153855.65625 1.0 0 0.0 14 Unmodified _SPWGKHVF_ ENSG00000110108|ENST00000227525|TMEM109 19.438996006549623 0.6237395211498085 2 [PS]W[KG]HV{M(Oxidation (M))|F} 8 0 + 34.429 0.0 0.0 3.5996 3.5996 76.216 0.0 0.0 0.0 5.766835540847168 0.476919903378743 0.476919903378743 8.025012804190577 0 0.3494850021680094 2.0 0.0 0.0 + + [PS]W[KG]HV{M(Oxidation (M))|F};[PS]AD[KG]HV{M(Oxidation (M))|F};[VG][HK]WPS{M(Oxidation (M))|F};[PS][R{M(Oxidation (M))|F}]VS[HQ];[HV][KG]WPS{M(Oxidation (M))|F} 3.5996;2.7606;2.67;1.7817;0.22791 +;-;-;-;- + 105 + 1 1.949 43791.9 1.0 3575 3441 7004 DOHH2_400M_050219_2,7018 DOHH2_400M_050219_2,7018,SPWGKHVF False True SPWGKHVF 38.029099 479.250628650188 1459433.25 7004.0 ENSG00000110108|ENST00000227525|TMEM109 4.109070936838786 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7019 38.036 339.0 286900.0 25 0 24695.0 + 6732 EDLEKRIKW 9 126 406.22788707600336 1215.66183182821 3 406.2274658083916 MULTI CID FTMS 0 0 0 7004 150390.21875 0.937204773613072 -1 0.1359405517578125 15 Unmodified _EDLEKRIKW_ REV__ENSG00000118898|ENST00000345988|PPL 10.799506525563784 0.5443532743200366 2 EKW 3 -1 26.287 0.0 0.0 2.1623 0.0 0.0 754.4342663694827 0.0 754.4342663694827 0.0 14.69273760456403 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3807196863200844 EKW 2.1623 - 88 1 1.949 82121.8 1.0 3576 3441 7004 DOHH2_400M_050219_2,7019 DOHH2_400M_050219_2,7019,EDLEKRIKW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7020 38.05 800.0 121140.0 25 0 6588.9 + -1 YSDKYFDEHYEY 12 119 829.8374629057098 0 829.8361694216728 PEAK CID FTMS 0 0 0 7004 122954.9453125 1.0 0 0.0 16 2 Carbamidomethyl (C) _YMC(Carbamidomethyl (C))HRSYC(Carbamidomethyl (C))YRY_ ENSG00000123975|ENST00000314355|CKS2 2.498486711656943 0.4761840153648598 2 {M(Oxidation (M))|F}YHED{M(Oxidation (M))|F}YKDD 10 -1 84.894 0.0 0.0 5.1213 0.0 0.0 163.0654904988799 132.04570947818596 295.1111999770659 0.0 0.0 0.0 0.0 0 2.7971062485323515 0.0 2.2034021960761265 0.0 {M(Oxidation (M))|F}YHED{M(Oxidation (M))|F}YKDD 5.1213 - 2518 + 1 1.949 71762.3 0.6100000143051147 3577 3441 7004 DOHH2_400M_050219_2,7020 DOHH2_400M_050219_2,7020,YMCHRSYCYRY False False YSDKYFDEHYEY 38.050253 829.836169421673 928963.5625 7004.0 ENSG00000123975|ENST00000314355|CKS2 11.406818707784018 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7021 38.06 542.0 159170.0 25 0 17898.0 + 20630 LLPPSSKT 8 139 421.7511096353617 841.4876663375235 2 421.7509643435478 MULTI CID FTMS 0 0 0 7004 124992.484375 0.543254928331538 4 -0.3700370788574219 17 Unmodified _LLPPSSKT_ REV__ENST00000271843.8_1_1:153946752-153946992:-|nuORF 5.230669730166228 0.792582437072536 2 {I|L} 1 -1 8.8735 0.0 0.0 1.0545 0.0 0.0 710.3926936586157 0.0 710.3926936586157 0.0 6.399203482970215 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0545 + + 23 + 1 1.949 70078.0 1.0 3578 3441 7004 DOHH2_400M_050219_2,7021 DOHH2_400M_050219_2,7021,LLPPSSKT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7022 38.063 189.0 409960.0 25 0 34645.0 + 24479 MIEPRTLQY 9 104 583.7966821252453 1165.5788113172905 2 583.7977172732353 MULTI CID FTMS 0 0 0 7004 113693.625 0.1244921605986908 -2 0.1545677185058593 18 Oxidation (M) _M(Oxidation (M))IEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 57.72198328787511 0.0273433238377839 2 [VP]E[RP]TPE{I|L} 9 5 40.499 0.0 0.0 3.4745 0.0 0.0 0.0 144.014943479653 144.014943479653 11.609915303255605 0.0 0.0 0.0 0 1.0994850021680094 1.6989700043360187 0.3494850021680094 0.7302046884880937 [VP]E[RP]TPE{I|L} 3.4745 - 209 1 1.949 63421.8 1.0 3579 3441 7004 DOHH2_400M_050219_2,7022 DOHH2_400M_050219_2,7022,MIEPRTLQY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7023 38.078 800.0 132500.0 25 0 12432.0 + 11331 GFAGRVLAHFT 11 154 588.3219449122331 0 588.3215820193291 PEAK CID FTMS 0 0 0 7004 128881.7421875 1.0 0 0.0 19 Unmodified _GFAGRVLAHFT_ REV__ENSG00000187950|ENST00000537054|OVCH1;REV__nc|ENSG00000187950|Q7RTY7|OVCH1 8.745405648335112 0.4618489994582195 2 D 1 -1 8.9794 0.0 0.0 0.76445 0.0 0.0 587.3174228396806 469.2575472467407 1056.5749700864212 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 D 0.76445 - 20 + 1 1.949 81235.0 0.6200000047683716 3580 3441 7004 DOHH2_400M_050219_2,7023 DOHH2_400M_050219_2,7023,GFAGRVLAHFT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7024 38.092 800.0 127300.0 25 0 29572.0 -1 0 57 1142.4665597866715 3424.377849960215 3 1142.801684558392 MULTI CID FTMS 0 0 0 7004 105410.7265625 0.5832584190200913 -1 0.1359405517578125 20 2 E 1 -1 9.2917 0.0 0.0 0.27134 0.0 0.0 2768.1500105908103 524.1626680963499 3292.3126786871603 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 E 0.27134 - 9 + 1 1.949 91669.1 0.4399999976158142 3581 3441 7004 DOHH2_400M_050219_2,7024 DOHH2_400M_050219_2,7024, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7026 38.097 32.0 1575400.0 25 0 505730.0 -1 TQLEAMELY 9 64 557.2601117941113 1112.5056706550224 2 557.2606078982353 MULTI CID FTMS 0 0 0 7025 323259.375 0.2549685128934311 2 -0.1724700927734375 1 Oxidation (M) _TQLEAM(Oxidation (M))ELY_ ENSG00000136877|ENST00000373247|FPGS;ENST00000460181.5_1_9:130565203-130569527:+|nuORF;ENST00000479375.6_1_9:130556974-130569527:+|nuORF;ENST00000488307.5_1_9:130565203-130570042:+|nuORF;nc|ENSG00000136877|Q05932-2|FPGS;nc|ENSG00000136877|Q05932-3|FPGS;nc|ENSG00000136877|Q05932-4|FPGS 6.723162845929126 0.6799819581413107 2 {[MS]|[{M(Oxidation (M))|F}A]}E[HA]N 6 -1 26.655 0.0 0.0 2.396 0.0 0.0 0.0 440.2260836236938 440.2260836236938 12.05136871872881 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}E[HA]N 2.396 - 25 + 1 1.943 45357.1 1.0 3582 3442 7025 DOHH2_400M_050219_2,7026 DOHH2_400M_050219_2,7026,TQLEAMELY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7027 38.099 121.0 580400.0 25 0 51628.0 + 11771 GLKVREYEL 9 83 553.8143507989168 0 553.8141357302666 PEAK CID FTMS 0 0 0 7025 423946.09375 0.0723587397857089 4 -0.2652549743652344 2 Unmodified _GLKVREYEL_ ENSG00000142676|ENST00000643754|RPL11;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;nc|ENSG00000142676|P62913-2|RPL11 24.99096001346401 0.1558265925128033 2 GKV 3 6 17.193 0.0 0.0 1.555 0.0 0.0 113.08558197912164 705.321371993719 818.4069539728407 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 GKV 1.555 - 23 + 1 1.943 58895.5 1.0 3583 3442 7025 DOHH2_400M_050219_2,7027 DOHH2_400M_050219_2,7027,GLKVREYEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7028 38.101 22.0 3545700.0 25 0 896920.0 + 4813 DERLRINSL 9 62 558.3122899927076 1114.6100270522152 2 558.3121826052666 MULTI CID FTMS 0 0 0 7025 2466048.5 0.8980952361008975 -1 0.1234054565429687 3 Unmodified _DERLRINSL_ ENSG00000120333|ENST00000476371|MRPS14 36.506200033944 0.094635877243972 2 DER{I|L} 4 5 48.8 0.0 0.0 4.3782 0.0 0.0 0.0 598.3310030572874 598.3310030572874 27.830918867322296 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.3807196863200844 0.0 + DER{I|L} 4.3782 + + 47 + 1 1.943 61108.6 1.0 3584 3442 7025 DOHH2_400M_050219_2,7028 DOHH2_400M_050219_2,7028,DERLRINSL True True DERLRINSL 38.100632 558.312182605267 16789584.0 7025.0 ENSG00000120333|ENST00000476371|MRPS14 5.1343994140625 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7029 38.102 43.0 1603600.0 25 0 195190.0 + 7219 EERADLIAY 9 71 540.2716238855018 1078.5286948378034 2 540.2722656130791 MULTI CID FTMS 0 0 0 7025 1317281.875 0.5069908000090446 -1 0.1234054565429687 4 Unmodified _EERADLIAY_ ENSG00000172115|ENST00000305786|CYCS 36.12702656103203 0.0967173616627612 2 {I|L}{I|L}AY 4 5 41.938 0.0 0.0 3.8885 0.0 0.0 600.2510374081248 0.0 600.2510374081248 0.0 25.684180743856896 0.0 0.0 0 1.0 0.0 0.0 0.0 + {I|L}{I|L}AY 3.8885 + + 90 1 1.943 56609.8 1.0 3585 3442 7025 DOHH2_400M_050219_2,7029 DOHH2_400M_050219_2,7029,EERADLIAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7030 38.104 72.0 1005800.0 25 0 76286.0 + 456 AEFQRLPSY 9 88 555.7825854824296 1109.550618031659 2 555.7827636599541 MULTI CID FTMS 0 0 0 7025 958773.8125 0.5453453724399533 -2 0.2593460083007812 5 Unmodified _AEFQRLPSY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 45.739877483867886 0.0497104363764649 2 {[CP]|[EA]}{M(Oxidation (M))|F}QR{I|L}PSY 9 0 + 71.08 0.0 0.0 6.4062 6.4062 88.681 0.0 0.0 0.0 48.11365663899274 14.09256854528806 14.09256854528806 9.208187539523747 0 1.8494850021680087 0.0 0.9247425010840048 0.3494850021680094 + + {[CP]|[EA]}{M(Oxidation (M))|F}QR{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}[AG]R{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[CP]|[EA]}{M(Oxidation (M))|F}QR[DV][{M(Oxidation (M))|F}V];{[CP]|[EA]}{M(Oxidation (M))|F}[AG]R[DV][{M(Oxidation (M))|F}V];{[CP]|[EA]}{M(Oxidation (M))|F}[MD][K{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[CP]|[EA]}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}[RV][{M(Oxidation (M))|F}V] 6.4062;5.5763;3.5011;2.5356;1.7057;0.95362;0.66634 +;-;-;-;-;-;- + 266 + 1 1.943 59435.2 1.0 3586 3442 7025 DOHH2_400M_050219_2,7030 DOHH2_400M_050219_2,7030,AEFQRLPSY True True AEFQRLPSY 38.103538 555.782763659954 28191188.0 7025.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 8.326367219289144 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7031 38.105 85.0 967030.0 25 0 126660.0 + 5186 DIQKRFGL 8 79 488.78263209275633 975.5507112523128 2 488.7824279665947 MULTI CID FTMS 0 0 0 7025 776762.75 1.0 0 0.0 6 Unmodified _DIQKRFGL_ ENSG00000168653|ENST00000372969|NDUFS5 26.88365393820708 0.4786498634179528 2 D{I|L}QKP 5 4 65.054 0.0 0.0 6.6684 0.0 0.0 0.0 391.2216890924438 391.2216890924438 50.36114602796653 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.4247425010840047 D{I|L}QKP 6.6684 - 166 + 1 1.943 69402.5 1.0 3587 3442 7025 DOHH2_400M_050219_2,7031 DOHH2_400M_050219_2,7031,DIQKRFGL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7032 38.107 60.0 1047100.0 25 0 166970.0 + 24469 MIDVTKSYY 9 94 560.2725900815926 1118.5306272299852 2 560.2728149294853 MULTI CID FTMS 0 0 0 7025 759429.3125 1.0 0 0.0 7 Unmodified _MIDVTKSYY_ ENSG00000166847|ENST00000300087|DCTN5;ENST00000566053.5_1_16:23652819-23678462:+|nuORF 26.268140514670165 0.1969607489560049 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[QT]SDVT 9 5 57.782 0.0 0.0 5.1659 0.0 0.0 0.0 125.0724581354125 125.0724581354125 42.6047653249357 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.9476212463643424 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[QT]SDVT 5.1659 - 482 + 1 1.943 54117.1 1.0 3588 3442 7025 DOHH2_400M_050219_2,7032 DOHH2_400M_050219_2,7032,MIDVTKSYY False True MIDVTKSYY 38.106926 560.2733 4594896.5 7025.0 ENSG00000166847|ENST00000300087|DCTN5;;ENST00000566053.5_1_16:23652819-23678462:+|nuORF 1.045896013577779 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7033 38.11 139.0 478280.0 25 0 55062.0 + 42390 VTDSGPTFNY 10 97 550.7484567406758 1099.4823605481515 2 550.7484619021416 MULTI CID FTMS 0 0 0 7025 550298.5625 0.6608786343146935 -1 0.1234054565429687 8 Unmodified _VTDSGPTFNY_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 54.773552608820026 0.052133998764723 2 {M(Oxidation (M))|F}VT[SG]NY 7 5 38.364 0.0 0.0 3.4893 0.0 0.0 313.1232429717828 0.0 313.1232429717828 0.0 11.970705572328969 0.0 0.0 0 0.5 0.0 1.110924374808178 0.5 {M(Oxidation (M))|F}VT[SG]NY 3.4893 - 484 + 1 1.943 57481.6 1.0 3589 3442 7025 DOHH2_400M_050219_2,7033 DOHH2_400M_050219_2,7033,VTDSGPTFNY True True VTDSGPTFNY 38.109742 550.748461902142 5925204.0 7025.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 4.659517526626587 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7034 38.113 152.0 532020.0 25 0 105890.0 + 31760 RSDTPLIY 8 71 482.7584718005593 963.5023906679186 2 482.7588378787041 MULTI CID FTMS 0 0 0 7025 474859.03125 0.4862286059098537 -2 0.2593460083007812 9 Unmodified _RSDTPLIY_ ENSG00000196305|ENST00000443024|IARS1 19.256988751693697 0.6264283240490721 2 {M(Oxidation (M))|F}{I|L}Y 3 6 33.06 0.0 0.0 3.4312 0.0 0.0 522.3039176227999 0.0 522.3039176227999 0.0 22.090606190045108 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}Y 3.4312 - 45 + 1 1.943 66577.9 1.0 3590 3442 7025 DOHH2_400M_050219_2,7034 DOHH2_400M_050219_2,7034,RSDTPLIY False True RSDTPLIY 38.112759 482.758837878704 15486625.0 7025.0 ENSG00000196305|ENST00000443024|IARS1 6.361339410146077 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7035 38.116 166.0 595850.0 25 0 114200.0 + 1198 AIDNPLHY 8 105 471.7377104612344 0 471.7378112673759 PEAK CID FTMS 0 0 0 7025 452814.09375 0.3117003376419103 -3 0.2779731750488281 10 Unmodified _AIDNPLHY_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 40.44857923139169 0.1366842323899322 2 DNP{I|L}H 5 3 20.428 0.0 0.0 2.1698 0.0 0.0 184.11945709177468 178.0512636774047 362.1707207691794 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + DNP{I|L}H 2.1698 + + 122 + 1 1.943 81480.5 1.0 3591 3442 7025 DOHH2_400M_050219_2,7035 DOHH2_400M_050219_2,7035,AIDNPLHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7036 38.119 142.0 401260.0 25 0 23240.0 + 10444 FTEPNEISQY 10 93 614.2801530849251 1226.5457532366502 2 614.2799560427666 MULTI CID FTMS 0 0 0 7025 378153.3125 1.0 0 0.0 11 Unmodified _FTEPNEISQY_ ENSG00000143155|ENST00000367833|TIPRL 39.94969957227396 0.1580982266129622 2 QY 2 8 22.541 0.0 0.0 1.8377 0.0 0.0 917.4122215977816 0.0 917.4122215977816 0.0 0.3034473146052008 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 + QY 1.8377 + + 276 + 1 1.943 48082.7 1.0 3592 3442 7025 DOHH2_400M_050219_2,7036 DOHH2_400M_050219_2,7036,FTEPNEISQY False True FTEPNEISQY 38.118861 614.279956042767 2720260.0 7025.0 ENSG00000143155|ENST00000367833|TIPRL 4.533701340357463 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7037 38.122 174.0 311110.0 25 0 44846.0 + 20466 LLKVNQEL 8 95 478.7922305409746 955.5699081487492 2 478.7922546267509 MULTI CID FTMS 0 0 0 7025 306622.96875 1.0 0 0.0 12 Unmodified _LLKVNQEL_ ENSG00000100347|ENST00000350028|SAMM50;ENST00000474323.5_1_22:44371844-44392260:+|nuORF 30.22481116460888 0.4082965392918993 2 {I|L}{I|L}WW 4 6 27.14 0.0 0.0 2.8402 0.0 0.0 0.0 354.23791286970544 354.23791286970544 12.535918783769093 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {I|L}{I|L}WW 2.8402 - 89 1 1.943 45002.9 1.0 3593 3442 7025 DOHH2_400M_050219_2,7037 DOHH2_400M_050219_2,7037,LLKVNQEL False True LLKVNQEL 38.122236 478.792254626751 1549403.375 7025.0 ENST00000474323.5_1_22:44371844-44392260:+|nuORF;;ENSG00000100347|ENST00000350028|SAMM50 0.5741078903277715 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7038 38.127 245.0 356280.0 25 0 50542.0 + 43913 YGFEKPSAI 9 100 506.2604044695252 1010.5062560058504 2 506.2607604861259 MULTI CID FTMS 0 0 0 7025 273136.6875 1.0 0 0.0 13 Unmodified _YGFEKPSAI_ ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465222.1_1_3:186502277-186502505:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENST00000467585.1_1_3:186502182-186503751:+|nuORF;ENST00000485101.5_1_3:186501384-186502505:+|nuORF;ENST00000486805.5_1_3:186501384-186502505:+|nuORF;ENST00000575957.1_1_17:78115565-78120760:-|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584054.5_1_17:7476159-7478064:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;nc|ENSG00000161960|P60842-2|EIF4A1 57.72198328787511 0.0273433238377839 2 YG{M(Oxidation (M))|F}EKPSA{I|L} 9 0 + 79.364 0.0 0.0 7.8539 7.8539 96.022 0.0 0.0 0.0 51.28176764770821 13.349213759150544 13.349213759150544 21.568364597629422 0 1.5114393726401687 1.6989700043360187 0.3807196863200844 0.0 + + YG{M(Oxidation (M))|F}EKPSA{I|L};YG{M(Oxidation (M))|F}E[PG][KT]{I|L};YG{[RE]|[WV]}[R{M(Oxidation (M))|F}]A{I|L};YG{M(Oxidation (M))|F}[DV]{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L};[YG][QT][{I|L}P]GY{I|L};[{I|L}P]Q{[CA]|SS}{M(Oxidation (M))|F}GY{I|L};[{I|L}P]QG[YT]GY{I|L};[PS]AKE{M(Oxidation (M))|F}GY{I|L};Y[WR][R{M(Oxidation (M))|F}]A{I|L};[{I|L}P][KS]{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT} 7.8539;5.7195;4.5287;4.5203;3.0489;1.9217;1.9217;1.7626;1.7182;1.5292 +;-;-;-;-;-;-;-;-;- + 280 + 1 1.943 71503.5 1.0 3594 3442 7025 DOHH2_400M_050219_2,7038 DOHH2_400M_050219_2,7038,YGFEKPSAI True True YGFEKPSAI 38.126807 506.260760486126 1791627.25 7025.0 ENST00000584054.5_1_17:7476159-7478064:+|nuORF;;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;;ENST00000467585.1_1_3:186502182-186503751:+|nuORF;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;ENSG00000141543|ENST00000649764|EIF4A3;;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;;ENST00000485101.5_1_3:186501384-186502505:+|nuORF;;nc|ENSG00000156976|Q14240-2|EIF4A2;;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;;ENSG00000156976|ENST00000323963|EIF4A2;;ENST00000465222.1_1_3:186502277-186502505:+|nuORF;;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;;ENST00000575957.1_1_17:78115565-78120760:-|nuORF;;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENST00000486805.5_1_3:186501384-186502505:+|nuORF 7.815716902414958 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7039 38.134 411.0 226930.0 25 0 40413.0 -1 EMYQELMEMCH 11 88 766.7780767494886 1531.5416005657771 2 766.7777587771416 MULTI CID FTMS 0 0 0 7025 217238.40625 0.8382498430157141 1 -0.0785179138183593 14 Carbamidomethyl (C),2 Oxidation (M) _EMYQELM(Oxidation (M))EM(Oxidation (M))C(Carbamidomethyl (C))H_ ENSG00000144010|ENST00000639673|TRIM43B;ENSG00000144015|ENST00000272395|TRIM43 1.3295316138638542 0.8688751186870782 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}CSN 6 -1 32.357 0.0 0.0 2.1127 0.0 0.0 0.0 817.2839077867955 817.2839077867955 0.8727270250229999 0.0 0.0 0.0 0 0.5 0.0 0.5484550065040281 0.4247425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}CSN 2.1127 - 244 1 1.943 73127.6 1.0 3595 3442 7025 DOHH2_400M_050219_2,7039 DOHH2_400M_050219_2,7039,EMYQELMEMCH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7040 38.137 136.0 432110.0 25 0 48575.0 23987 LVVDQKVYI 9 95 359.5496358379919 1075.6270781141757 3 359.5496398806572 MULTI CID FTMS 0 0 0 7025 212017.015625 1.0 0 0.0 15 Unmodified _LVVDQKVYI_ ENSG00000174898|ENST00000381624|CATSPERD 20.41453444215458 0.284085796332423 2 DVY{I|L} 4 5 15.618 0.0 0.0 1.4519 0.0 0.0 567.3863392560562 0.0 567.3863392560562 0.0 1.6381157305231395 0.0 0.0 0 0.242992819099939 0.0 0.0 0.0 DVY{I|L} 1.4519 - 42 1 1.943 57482.4 1.0 3596 3442 7025 DOHH2_400M_050219_2,7040 DOHH2_400M_050219_2,7040,LVVDQKVYI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7041 38.144 415.0 296130.0 25 0 36188.0 + 38055 TPFGKRLL 8 134 466.2906883729515 930.566823812703 2 466.2904846072197 MULTI CID FTMS 0 0 0 7025 200496.28125 1.0 0 0.0 16 Unmodified _TPFGKRLL_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 34.10243960390752 0.3329570729325616 2 TP{M(Oxidation (M))|F}GK 5 3 61.656 0.0 0.0 6.6256 0.0 0.0 0.0 397.2570894830688 397.2570894830688 50.546384236363 0.0 0.0 0.0 0 0.8468040358200661 2.0 0.0 0.0 + TP{M(Oxidation (M))|F}GK 6.6256 + + 95 + 1 1.943 97184.2 1.0 3597 3442 7025 DOHH2_400M_050219_2,7041 DOHH2_400M_050219_2,7041,TPFGKRLL False True TPFGKRLL 38.144326 466.29048460722 897767.9375 7025.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-2|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 4.108907143274943 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7042 38.147 155.0 509620.0 25 0 54386.0 + 12507 GVDVTGPHLY 10 116 529.2683040839432 1056.5220552346864 2 529.2689086794853 MULTI CID FTMS 0 0 0 7025 198561.4375 0.3936932653307295 -2 0.2593460083007812 17 Unmodified _GVDVTGPHLY_ ENSG00000136930|ENST00000259457|PSMB7 25.399314129420983 0.3980215340001851 2 [VG]DVPAS{I|L}HY 10 5 + 64.831 0.0 0.0 6.1362 6.1362 82.514 0.0 0.0 0.0 15.678644001908566 4.886831541432315 4.886831541432315 4.886831541432315 0 0.9247425010840048 2.0 0.0 0.0 [VG]DVPAS{I|L}HY;[VG]DVPAS{[RE]|[WV]}Q;[VG]DVT[PG]{I|L}HY;[VG]DVPAN{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};[VG]DVPAS{[WN]|[YH]}{I|L};[VG]DVT{[QD]|[EN]|[WG]|[KD]|[RS]}[VP]Q;[VG]DVT[PG]{[RE]|[WV]}Q;[VG]DVPAGG{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};[VG]DVT{[QD]|[EN]|[WG]|[KD]|[RS]}[VG][PA];[VG]DVT{[QD]|[EN]|[WG]|[KD]|[RS]}[NP]{I|L} 6.1362;5.6737;4.8131;4.6897;4.6897;4.3506;4.3506;3.8223;3.6873;3.3666 -;-;-;-;-;-;-;-;-;- 815 + 1 1.943 69851.7 1.0 3598 3442 7025 DOHH2_400M_050219_2,7042 DOHH2_400M_050219_2,7042,GVDVTGPHLY False True GVDVTGPHLY 38.147398 529.268908679485 4085378.5 7025.0 ENSG00000136930|ENST00000259457|PSMB7 5.414669831593831 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7043 38.153 242.0 288480.0 25 0 35374.0 -1 NVLIVCVP 8 99 457.2641402460201 912.5137275588404 2 457.2641174197197 MULTI CID FTMS 0 0 0 7025 176746.34375 0.6909243631676679 -5 0.4480323791503906 18 Carbamidomethyl (C) _NVLIVC(Carbamidomethyl (C))VP_ ENSG00000093000|ENST00000347635|NUP50;ENST00000405676.2_1_6:25140296-25141628:+|nuORF;ENST00000469163.1_1_22:45580305-45580533:+|nuORF;nc|ENSG00000093000|Q9UKX7-2|NUP50 13.50788311687929 0.7113601687236069 2 Y 1 -1 10.485 0.0 0.0 1.149 0.0 0.0 731.4392016572763 0.0 731.4392016572763 0.0 0.2069634257911268 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.149 - 41 + 1 1.943 63135.8 1.0 3599 3442 7025 DOHH2_400M_050219_2,7043 DOHH2_400M_050219_2,7043,NVLIVCVP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7044 38.162 495.0 201090.0 25 0 13929.0 + 18382 KVPQVSTPTL 10 140 535.3165631520994 1068.6185733709988 2 535.3144409060478 MULTI CID FTMS 0 0 0 7025 151422.953125 1.0 0 0.0 19 Unmodified _KVPQVSTPTL_ CON__P02768-1;CON__P02769;ENSG00000163631|ENST00000295897|ALB;nc|ENSG00000163631|P02768-2|ALB;nc|ENSG00000163631|P02768-3|ALB 41.95555342248728 0.1369168616057562 2 TPT{I|L} 4 6 24.399 0.0 0.0 2.2832 0.0 0.0 638.373683089552 0.0 638.373683089552 0.0 5.695990759876111 0.0 0.0 0 0.9247425010840048 0.0 0.555462187404089 0.0 + TPT{I|L} 2.2832 + + 178 + 1 1.943 80675.0 1.0 3600 3442 7025 DOHH2_400M_050219_2,7044 DOHH2_400M_050219_2,7044,KVPQVSTPTL False True KVPQVSTPTL 38.161848 535.314440906048 910497.625 7025.0 P02768-1;;ENSG00000163631|ENST00000295897|ALB;;nc|ENSG00000163631|P02768-3|ALB;;nc|ENSG00000163631|P02768-2|ALB;;P02769 2.7250285943349204 2.0 True 10.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 7045 38.171 509.0 200150.0 25 0 17029.0 + 467 AEFTKSIAKF 10 117 571.3169262620604 1140.6192995909207 2 571.3188964724541 MULTI CID FTMS 0 0 0 7025 91614.3359375 0.7062208630411623 -1 0.1234054565429687 20 Unmodified _AEFTKSIAKF_ ENSG00000118363|ENST00000263672|SPCS2 60.94344597037026 0.0341113498090871 2 {M(Oxidation (M))|F}{[CP]|[EA]}TKS{I|L}AK{M(Oxidation (M))|F} 10 2 + 47.387 0.0 0.0 4.1545 4.1545 82.323 0.0 0.0 0.0 35.2346448708586 12.30663493768214 12.30663493768214 12.971062485323516 0 1.5924778212679485 0.0 0.3807196863200844 0.3252574989159953 {M(Oxidation (M))|F}{[CP]|[EA]}TKS{I|L}AK{M(Oxidation (M))|F};{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}K[VS]PAK{M(Oxidation (M))|F};[RH]{[CP]|[EA]}[VS]PAK{M(Oxidation (M))|F};[KA]{[TV]|[{I|L}S]}T{M(Oxidation (M))|F}K{[MS]|[{M(Oxidation (M))|F}A]}E;[KT]{[VA]|[{I|L}G]}T{M(Oxidation (M))|F}K{[MS]|[{M(Oxidation (M))|F}A]}E;[KA]{[TV]|[{I|L}S]}TK{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}E;[RH][WP]S{I|L}AK{M(Oxidation (M))|F};[KT]{[VA]|[{I|L}G]}TK{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}E;[KA]{[TV]|[{I|L}S]}KT{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}E;[RH]AE{M(Oxidation (M))|F}R[KT]P 4.1545;3.0173;1.951;1.6099;1.4154;1.3459;1.2826;1.1514;1.0233;0.88901 -;-;-;-;-;-;-;-;-;- 430 + 1 1.943 80146.3 1.0 3601 3442 7025 DOHH2_400M_050219_2,7045 DOHH2_400M_050219_2,7045,AEFTKSIAKF True True AEFTKSIAKF 38.170834 571.318896472454 816101.75 7025.0 ENSG00000118363|ENST00000263672|SPCS2 6.673898855845134 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7047 38.176 155.0 317280.0 25 0 51358.0 -1 LGHLVALM 8 79 435.2510543401133 868.4875557470267 2 435.2510558962822 MULTI CID FTMS 0 0 0 7046 291631.5625 0.4829114163133658 -6 0.52655029296875 1 Oxidation (M) _LGHLVALM(Oxidation (M))_ ENSG00000101353|ENST00000343811|MROH8;nc|ENSG00000101353|Q9H579-2|MROH8;nc|ENSG00000101353|Q9H579|MROH8 2.889219685676258 0.8067950007271085 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.943 46375.4 1.0 3602 3443 7046 DOHH2_400M_050219_2,7047 DOHH2_400M_050219_2,7047,LGHLVALM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7048 38.181 265.0 264360.0 25 0 20702.0 + 4747 DEIDAIGGRRF 11 88 416.8818324268155 1247.6236678806465 3 416.8824340701103 MULTI CID FTMS 0 0 0 7046 110707.5625 0.1164366686820824 2 -0.1681137084960937 2 Unmodified _DEIDAIGGRRF_ ENSG00000100519|ENST00000445930|PSMC6 15.538449434065043 0.7119291465483839 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D{M(Oxidation (M))|F}[{I|L}V]{[RE]|[WV]}{I|L} 10 5 + 28.689 0.0 0.0 2.2995 2.2995 72.633 0.0 0.0 0.0 16.21523434085148 2.2235719422483413 2.2235719422483413 6.817496819840656 0 0.4247425010840047 0.0 0.0 0.3807196863200844 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D{M(Oxidation (M))|F}[{I|L}V]{[RE]|[WV]}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F}D[{I|L}V]{[RE]|[WV]}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L}D[{I|L}V]{[RE]|[WV]}{I|L} 2.2995;1.7531;1.5118 -;-;- 77 + 1 1.943 64279.0 1.0 3603 3443 7046 DOHH2_400M_050219_2,7048 DOHH2_400M_050219_2,7048,DEIDAIGGRRF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7049 38.184 129.0 613280.0 25 0 70612.0 + 4938 DGLVKVQV 8 105 429.2584701583135 856.5023873834269 2 429.2585937380791 MULTI CID FTMS 0 0 0 7046 370455.96875 0.7656174557760742 -1 0.0785179138183593 3 Unmodified _DGLVKVQV_ ENSG00000137100|ENST00000259632|DCTN3;nc|ENSG00000137100|O75935-2|DCTN3;nc|ENSG00000137100|O75935-3|DCTN3 60.38955033654506 0.1153153300159026 2 [DG]{I|L}VKVQV 8 0 [DG]{I|L} + + 33.894 14.437 5.0633 3.9572 3.9572 51.538 0.0 0.0 0.0 0.0 19.45677228596267 0.0 0.0 0 0.7742275032520141 0.0 0.0 1.278659694992122 + + [DG]{I|L}VKVQV 3.9572 + + 198 + 1 1.943 67316.1 1.0 3604 3443 7046 DOHH2_400M_050219_2,7049 DOHH2_400M_050219_2,7049,DGLVKVQV True True DGLVKVQV 38.18374 429.258593738079 2832238.75 7046.0 ENSG00000137100|ENST00000259632|DCTN3;;nc|ENSG00000137100|O75935-2|DCTN3;;nc|ENSG00000137100|O75935-3|DCTN3 2.765302538871765 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7050 38.188 236.0 368180.0 25 0 28185.0 + -1 ASELKALGY 9 112 476.2613616502816 475.2540851836816 1 476.2610656619072 MULTI CID FTMS 0 0 0 7046 364119.0625 1.0 0 0.0 4 ENSG00000176102|ENST00000323959|CSTF3 2 {[SA]|[TG]}E 3 -1 28.514 0.0 0.0 5.9997 0.0 0.0 0.0 185.11865846975232 185.11865846975232 7.544835218721204 0.0 0.0 0.0 0 0.0 2.0 0.6462566630072955 0.0 {[SA]|[TG]}E 5.9997 - 83 1 1.943 72097.4 1.0 3605 3443 7046 DOHH2_400M_050219_2,7050 DOHH2_400M_050219_2,7050, False False ASELKALGY 38.188171 476.261065661907 2610999.0 7046.0 ENSG00000176102|ENST00000323959|CSTF3 5.469032764434815 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7051 38.19 105.0 534260.0 25 0 52980.0 + + 893 AEEGGRSLW 9 83 502.743542849182 1003.472532765164 2 502.7439453005791 MULTI CID FTMS 0 0 0 7046 347174.5625 0.9251885173080824 -1 0.0785179138183593 5 Unmodified _AEWLDGKW_ ENST00000204517.10_1_16:4322677-4322779:-|nuORF 26.88365393820708 0.4786498634179528 2 {[CP]|[EA]}EG 4 -1 22.435 0.0 0.0 2.2357 0.0 0.0 0.0 614.3045137994749 614.3045137994749 3.5834938564822494 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 {[CP]|[EA]}EG 2.2357 - 33 + 1 1.943 50855.6 1.0 3606 3443 7046 DOHH2_400M_050219_2,7051 DOHH2_400M_050219_2,7051,AEWLDGKW False False AEEGGRSLW 38.190398 502.743945300579 2813560.5 7046.0 ENST00000204517.10_1_16:4322677-4322779:-|nuORF 1.804043059547742 2.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 7052 38.204 800.0 280040.0 25 0 15087.0 + 7542 EIEQKVVAL 9 195 514.8025903205795 0 514.8030883669853 PEAK CID FTMS 0 0 0 7046 227812.5625 1.0 0 0.0 6 Unmodified _EIEQKVVAL_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;ENST00000489156.1_1_6:152599163-152623219:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1 85.64151623876279 0.0090244794229972 2 AVV{I|L}E[NG]E 8 9 25.932 0.0 0.0 2.5236 0.0 0.0 131.09076306127764 82.06696497134999 213.15772803262763 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 2.721848749616356 0.0 AVV{I|L}E[NG]E 2.5236 - 1318 + 1 1.943 173365.6 0.8700000047683716 3607 3443 7046 DOHH2_400M_050219_2,7052 DOHH2_400M_050219_2,7052,EIEQKVVAL True True EIEQKVVAL 38.204235 514.803088366985 1441710.0 7046.0 nc|ENSG00000131018|Q8NF91-2|SYNE1;;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;;nc|ENSG00000131018|Q8NF91-4|SYNE1;;ENSG00000131018|ENST00000367255|SYNE1;;nc|ENSG00000131018|Q8NF91-8|SYNE1;;ENST00000489156.1_1_6:152599163-152623219:-|nuORF 3.766009330749512 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7053 38.207 147.0 349530.0 25 0 46724.0 + 42555 VTPLPPAE 8 100 412.230767951171 822.446982969142 2 412.2306091189384 MULTI CID FTMS 0 0 0 7046 204030.421875 0.5590788340320348 -4 0.3564910888671875 7 Unmodified _VTPLPPAE_ REV__ENSG00000100239|ENST00000612753|PPP6R2;REV__nc|ENSG00000100239|O75170-2|PPP6R2;REV__nc|ENSG00000100239|O75170-3|PPP6R2;REV__nc|ENSG00000100239|O75170-4|PPP6R2;REV__nc|ENSG00000100239|O75170-6|PPP6R2;REV__nc|ENSG00000100239|O75170|PPP6R2 2.577480529830294 0.808687252328423 2 E 1 -1 6.9897 0.0 0.0 0.84987 0.0 0.0 411.2430167599608 279.146103287973 690.3891200479338 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 E 0.84987 + + 1 + 1 1.943 45453.2 1.0 3608 3443 7046 DOHH2_400M_050219_2,7053 DOHH2_400M_050219_2,7053,VTPLPPAE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7054 38.214 377.0 252590.0 25 0 17356.0 + 32784 SEEETRVVF 9 124 548.2699939009701 1094.52543486874 2 548.2687255740166 MULTI CID FTMS 0 0 0 7046 102835.234375 0.7224826524488339 -1 0.0785179138183593 8 Unmodified _SEEETRVVF_ ENSG00000165304|ENST00000298048|MELK;nc|ENSG00000165304|Q14680-5|MELK;nc|ENSG00000165304|Q14680-6|MELK;nc|ENSG00000165304|Q14680-7|MELK 47.594388314883695 0.0456443387682827 2 {[ES]|[DT]|[{I|L}C]}EETRVV{M(Oxidation (M))|F} 9 0 + 45.088 0.0 0.0 4.1195 4.1195 83.209 0.0 0.0 0.0 10.09566169879838 15.42296958451168 10.09566169879838 17.367807219767204 0 1.6237125054200234 0.0 0.6694451763165201 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}EETRVV{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}W{[ES]|[DT]|[{I|L}C]}VV{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}W[WE]V{M(Oxidation (M))|F};[YE]QQVP{[QG]|[NA]}{M(Oxidation (M))|F};[YE]QQVP[KG]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[DP]RVV{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}{[CP]|[EA]}{[DS]|[MA]|[CV]|TT}VV{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}{[DA]|[EG]}{[ES]|[DT]|[{I|L}C]}VV{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}E[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}{[DA]|[EG]}[WE]V{M(Oxidation (M))|F} 4.1195;2.5327;2.3767;2.2318;2.2318;1.9426;1.7381;1.6914;1.5349;1.5305 +;-;-;-;-;-;-;-;-;- + 302 + 1 1.943 79956.2 1.0 3609 3443 7046 DOHH2_400M_050219_2,7054 DOHH2_400M_050219_2,7054,SEEETRVVF True True SEEETRVVF 38.213961 548.268725574017 1701954.5 7046.0 nc|ENSG00000165304|Q14680-5|MELK;;nc|ENSG00000165304|Q14680-7|MELK;;nc|ENSG00000165304|Q14680-6|MELK;;ENSG00000165304|ENST00000298048|MELK 6.72344175974528 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7055 38.228 800.0 148470.0 25 0 12050.0 + 13742 HRGPVLSL 8 144 439.76365278309055 877.5127526329811 2 439.7639037966728 MULTI CID FTMS 0 0 0 7046 94499.5390625 0.9592518972399564 1 -0.0939521789550781 9 Unmodified _HRGPVLSL_ ENSG00000135801|ENST00000258281|TAF5L 39.957323273325 0.2350051964751539 2 [RH]G[VP]{I|L}S{I|L} 8 0 + 45.208 0.0 0.0 5.1518 5.1518 77.059 0.0 0.0 0.0 3.0153844027245924 28.35923944530624 3.0153844027245924 3.366869606967775 0 1.174742501084005 0.0 0.4247425010840047 0.3807196863200844 + + [RH]G[VP]{I|L}S{I|L};[RH]KP{I|L}D{I|L};[RP][HK]{I|L}D{I|L} 5.1518;4.7682;2.8836 +;-;- + 138 1 1.943 97219.8 0.4799999892711639 3610 3443 7046 DOHH2_400M_050219_2,7055 DOHH2_400M_050219_2,7055,HRGPVLSL False True HRGPVLSL 38.227775 439.763903796673 915799.5625 7046.0 ENSG00000135801|ENST00000258281|TAF5L 6.764603137969971 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7056 38.242 800.0 120000.0 25 0 9432.4 -1 0 111 604.2972513338495 603.2899748672495 1 604.2946655154228 MULTI CID FTMS 0 0 0 7046 85003.6953125 0.4129406716582748 -7 0.60687255859375 10 2 {I|L}Q 2 -1 25.133 0.0 0.0 4.166 0.0 0.0 344.13642369713074 0.0 344.13642369713074 0.0 5.411071373652444 0.0 0.0 0 0.0 0.0 0.0 0.6549471895720985 {I|L}Q 4.166 - 51 + 1 1.943 79760.2 0.6100000143051147 3611 3443 7046 DOHH2_400M_050219_2,7056 DOHH2_400M_050219_2,7056, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7057 38.255 800.0 325250.0 25 0 128800.0 -1 0 65 1110.4566922954114 3328.348247486434 3 1110.790087878704 MULTI CID FTMS 0 0 0 7046 180752.71875 0.935668879140867 -1 0.0785179138183593 11 2 {I|L} 1 -1 6.9897 0.0 0.0 0.21001 0.0 0.0 2583.95619954376 628.2841890924436 3212.240388636204 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.21001 - 34 + 1 1.943 182923.6 0.6800000071525574 3612 3443 7046 DOHH2_400M_050219_2,7057 DOHH2_400M_050219_2,7057, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7058 38.265 435.0 297840.0 25 0 36513.0 + -1 YLFLTWLSC 9 124 601.7988666319782 1201.5831803307562 2 601.8199951052666 MULTI CID FTMS 0 0 0 -1 0 12 Carbamidomethyl (C) _YLFLTWLSC(Carbamidomethyl (C))_ REV__ENST00000374719.7_1_X:65817835-65819320:-|nuORF 23.1484247019978 0.2366544122328345 2 Y{I|L}DT 4 -1 56.564 0.0 0.0 4.7075 0.0 0.0 0.0 706.3425997369749 706.3425997369749 24.55994932245381 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.3054621874040891 0.0 Y{I|L}DT 4.7075 - 1436 + 1 1.943 96421.7 1.0 3613 3443 7046 DOHH2_400M_050219_2,7058 DOHH2_400M_050219_2,7058,YLFLTWLSC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7060 38.269 2.4 25871000.0 25 0 4867100.0 + 24483 MIEPRTLQY 9 70 575.7994555006755 1149.584358068151 2 575.8007690310478 MULTI CID FTMS 0 0 0 7059 22188536.0 0.7176729122022083 1 -0.0741615295410156 1 Unmodified _MIEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 51.487983226225225 0.0371074584807926 2 M{I|L}E[TP]R{I|L}QY 9 2 + 85.371 0.0 0.0 7.4262 7.4262 97.281 0.0 0.0 0.0 59.453096482460666 14.09256854528806 14.09256854528806 85.37069682934217 0 2.1435078169319297 2.0 0.3494850021680094 1.110924374808178 M{I|L}E[TP]R{I|L}QY 7.4262 - 54 + 1 1.939 50952.4 1.0 3614 3444 7059 DOHH2_400M_050219_2,7060 DOHH2_400M_050219_2,7060,MIEPRTLQY True True MIEPRTLQY 38.269302 575.800769031048 694532256.0 7059.0 ENSG00000105193|ENST00000251453|RPS16;;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 5.679199695587158 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7061 38.27 28.0 2020400.0 25 0 339920.0 + 43985 YIDEQFERY 9 47 631.7879139297086 1261.561274926217 2 631.7882568240166 MULTI CID FTMS 0 0 0 7059 1744322.625 0.4187396527240229 2 -0.0927848815917968 2 Unmodified _YIDEQFERY_ ENSG00000168385|ENST00000391971|SEPTIN2;ENST00000467971.5_1_2:242255375-242276932:+|nuORF;ENST00000484167.5_1_2:242276764-242276932:+|nuORF;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2 53.40400417844725 0.0329064971918313 2 Y{I|L}DEQ{M(Oxidation (M))|F}E[YR] 9 0 + 106.79 0.0 0.0 8.4648 8.4648 93.025 0.0 0.0 0.0 93.6008406144498 7.147642715192504 7.147642715192504 9.208187539523747 0 1.305462187404089 2.0 0.3807196863200844 1.2302046884880935 + + Y{I|L}DEQ{M(Oxidation (M))|F}E[YR];Y{I|L}DE[AG]{M(Oxidation (M))|F}E[YR];[Y{I|L}]D[W{M(Oxidation (M))|F}]ED{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 8.4648;7.7349;3.2167 +;-;- + 97 + 1 1.939 52120.8 1.0 3615 3444 7059 DOHH2_400M_050219_2,7061 DOHH2_400M_050219_2,7061,YIDEQFERY True True YIDEQFERY 38.270481 631.788256824017 50634512.0 7059.0 ENST00000467971.5_1_2:242255375-242276932:+|nuORF;;nc|ENSG00000168385|Q15019-3|SEPTIN2;;ENST00000484167.5_1_2:242276764-242276932:+|nuORF;;nc|ENSG00000168385|Q15019-2|SEPTIN2;;ENSG00000168385|ENST00000391971|SEPTIN2 8.669568061828613 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7062 38.273 119.0 493560.0 25 0 26017.0 + 11270 GETSYIRVY 9 83 544.2744667547832 1086.5343805763664 2 544.2747070193291 MULTI CID FTMS 0 0 0 7059 401098.71875 0.281668965051097 2 -0.0927848815917968 3 Unmodified _GETSYIRVY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 53.832793166522166 0.0319663582346103 2 {[DA]|[EG]}TSY{I|L}RVY 9 0 + 73.835 0.0 0.0 6.7954 6.7954 94.849 0.0 0.0 0.0 48.797568461734855 11.923487412610356 11.923487412610356 34.488474775526186 0 1.1989700043360187 2.0 0.4247425010840047 0.3494850021680094 + + {[DA]|[EG]}TSY{I|L}RVY;WTS[RH][KS]W;{[CT]|[{M(Oxidation (M))|F}G]}[W{M(Oxidation (M))|F}]{I|L}RVY 6.7954;3.6213;1.3908 +;-;- + 98 + 1 1.939 52369.5 1.0 3616 3444 7059 DOHH2_400M_050219_2,7062 DOHH2_400M_050219_2,7062,GETSYIRVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7063 38.276 180.0 379860.0 25 0 37690.0 + 6403 HVNGTFSVY 9 116 512.7400857526277 1023.4656185720554 2 512.7406494021416 MULTI CID FTMS 0 0 0 7059 248550.78125 0.3972136897657767 -2 0.1724700927734375 4 Unmodified _DYHQLSVY_ ENSG00000182379|ENST00000349394|NXPH4;ENST00000556415.1_1_12:57615249-57619527:+|nuORF 28.486842064014134 0.4448922141344407 2 [HV]D{[SA]|[TG]}{M(Oxidation (M))|F}SVY 9 6 + 65.517 0.0 0.0 6.4015 6.4015 92.569 0.0 0.0 0.0 16.355830254716253 41.38743756437101 16.355830254716253 22.21848749616356 0 0.8807196863200843 0.9208187539523752 2.0669015600442577 0.0 [HV]D{[SA]|[TG]}{M(Oxidation (M))|F}SVY;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{[SA]|[TG]}{M(Oxidation (M))|F}SVY;[HV][{M(Oxidation (M))|F}E][SG]SVY;{[SA]|[TG]}{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}SVY;{[CT]|[{M(Oxidation (M))|F}G]}T{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}SVY;[QA][PA]{M(Oxidation (M))|F}NDVY;[W{M(Oxidation (M))|F}][WH]SVY;[VS]{M(Oxidation (M))|F}[WH]WY;[HQ]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}WY;[QA]VSE{[SA]|[TG]}W{M(Oxidation (M))|F} 6.4015;4.2306;3.8821;3.8042;3.5645;3.4335;3.2056;2.9769;2.838;2.6733 -;-;-;-;-;-;-;-;-;- 685 1 1.939 54772.3 1.0 3617 3444 7059 DOHH2_400M_050219_2,7063 DOHH2_400M_050219_2,7063,DYHQLSVY False False HVNGTFSVY 38.276456 512.740649402142 0.0 7059.0 ENSG00000182379|ENST00000349394|NXPH4;;ENST00000556415.1_1_12:57615249-57619527:+|nuORF 7.432311534881592 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7064 38.282 285.0 562560.0 25 0 84145.0 20971 LNLSQLSVGL 10 138 522.308377714364 1042.602202495528 2 522.3089477419853 MULTI CID FTMS 0 0 0 7059 212699.4375 0.5536091935287482 -1 0.0939521789550781 5 Unmodified _LNLSQLSVGL_ ENSG00000137261|ENST00000378214|KIAA0319;nc|ENSG00000137261|Q5VV43-2|KIAA0319;nc|ENSG00000137261|Q5VV43-3|KIAA0319;nc|ENSG00000137261|Q5VV43-4|KIAA0319 13.90604991867851 0.6142120002215601 2 AQSVSNK 7 8 34.065 0.0 0.0 3.2673 0.0 0.0 310.221051227753 0.0 310.221051227753 0.0 11.29307797902552 0.0 0.0 0 0.0 0.0 0.6382104921644451 0.8076556684809654 AQSVSNK 3.2673 - 635 + 1 1.939 128367.5 1.0 3618 3444 7059 DOHH2_400M_050219_2,7064 DOHH2_400M_050219_2,7064,LNLSQLSVGL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7065 38.292 611.0 352320.0 25 0 12220.0 + 40792 VLLKARLVPA 10 223 360.58150946828266 1078.722699005048 3 360.5812560915947 MULTI CID FTMS 0 0 0 7059 210703.84375 0.0860761652930442 5 -0.3010520935058594 6 Unmodified _VLLKARLVPA_ ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B 20.580933911654288 0.5022139299129796 2 [{I|L}V]{I|L}NK{I|L}{I|L}V 8 5 40.416 0.0 0.0 3.7467 0.0 0.0 0.0 183.0767459216095 183.0767459216095 -0.2973416999081877 0.0 -0.2973416999081877 0.0 0 0.7429928190999391 1.6989700043360187 0.0 0.2887254899964357 [{I|L}V]{I|L}NK{I|L}{I|L}V 3.7467 - 157 1 1.939 187347.9 1.0 3619 3444 7059 DOHH2_400M_050219_2,7065 DOHH2_400M_050219_2,7065,VLLKARLVPA False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7066 38.298 280.0 282880.0 25 0 33025.0 + 42568 VTPPPPVG 8 140 382.2214324494116 762.4283119656233 2 382.2205688357353 MULTI CID FTMS 0 0 0 7059 193458.21875 1.0 0 0.0 7 Unmodified _VTPPPPVG_ REV__ENSG00000121774|ENST00000327300|KHDRBS1;REV__ENST00000307714.12_1_1:32479575-32503673:+|nuORF;REV__nc|ENSG00000121774|Q07666-2|KHDRBS1;REV__nc|ENSG00000121774|Q07666-3|KHDRBS1 0.7936320650641473 0.8195151834710337 2 H 1 -1 8.7236 0.0 0.0 1.1442 0.0 0.0 607.3617358931608 0.0 607.3617358931608 0.0 8.634993639681312 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.1442 - 14 + 1 1.939 68566.8 1.0 3620 3444 7059 DOHH2_400M_050219_2,7066 DOHH2_400M_050219_2,7066,VTPPPPVG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7067 38.306 486.0 197730.0 25 0 10079.0 2726 ATHNLMEL 8 134 464.7315390040196 927.4485250748392 2 464.7317077517509 MULTI CID FTMS 0 0 0 7059 132208.703125 0.0209729695928616 13 -0.9963150024414062 8 Unmodified _ATHNLMEL_ ENSG00000146414|ENST00000275233|SHPRH;ENST00000433355.6_1_6:146231577-146267398:-|nuORF;ENST00000519632.5_1_6:146239221-146248402:-|nuORF;ENST00000523276.1_1_6:146240471-146248402:-|nuORF;nc|ENSG00000146414|Q149N8-4|SHPRH 16.942295170755138 0.6606234159769251 2 [YV]T[WK]TM 7 7 + 31.622 0.0 0.0 3.4095 3.4095 66.37 0.0 0.0 0.0 0.2287874528033739 1.5747396408230756 0.2287874528033739 0.2287874528033739 0 0.5 0.0 0.2396518287104437 0.0 [YV]T[WK]TM;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[WK]TM;[H{I|L}]DQA{I|L}TM;[H{I|L}]D[AG]A{I|L}TM;[H{I|L}]DQAT{I|L}M;{[{M(Oxidation (M))|F}C]|[YS]}[WK]T{I|L}M;{[{M(Oxidation (M))|F}C]|[YS]}[WK]{I|L}TM;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}[HN][PG];{[YD]|[{M(Oxidation (M))|F}M]}{I|L}A[YN]G{I|L};{[CP]|[EA]}[HN]{I|L}{I|L}TM 3.4095;3.3849;3.2397;2.2411;2.1862;2.1367;2.112;2.0425;1.7748;1.6943 -;-;-;-;-;-;-;-;-;- 272 + 1 1.939 76637.9 1.0 3621 3444 7059 DOHH2_400M_050219_2,7067 DOHH2_400M_050219_2,7067,ATHNLMEL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7068 38.316 589.0 300510.0 25 0 16263.0 + 15811 ISGIVILSDF 10 188 532.3031575313898 1062.5917621295796 2 532.8032714724541 MULTI CID FTMS 0 0 0 7059 124059.1015625 0.7448622562796 -2 0.1724700927734375 9 Unmodified _ISGIVILSDF_ REV__ENSG00000157388|ENST00000350061|CACNA1D;REV__nc|ENSG00000157388|Q01668-2|CACNA1D;REV__nc|ENSG00000157388|Q01668-3|CACNA1D;REV__nc|ENSG00000157388|Q01668-4|CACNA1D 20.453626601364224 0.5043500229302764 2 {[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}[WR]S{M(Oxidation (M))|F} 8 -1 + 55.882 0.0 0.0 5.259 5.259 85.936 0.0 0.0 0.0 18.53871964321762 10.378807668912366 10.378807668912366 10.378807668912366 0 0.0 1.154901959985743 0.8129529932484498 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}[WR]S{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}[WR]{M(Oxidation (M))|F}S;{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}[WR]AY;{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}Y[KT]PS;{[QV]|[N{I|L}]|[RA]|[KV]}K[QT]{I|L}{I|L}S{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}Y[KT]SP;{[QV]|[N{I|L}]|[RA]|[KV]}K[QT]{I|L}{I|L}AY;{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}[WH]RP;{[QV]|[N{I|L}]|[RA]|[KV]}K[QT]{I|L}{I|L}{M(Oxidation (M))|F}S;{[QV]|[N{I|L}]|[RA]|[KV]}K[QT]KKG{M(Oxidation (M))|F} 5.259;4.2822;3.9819;3.3349;3.254;3.1418;2.4839;2.3085;2.2773;2.0549 -;-;-;-;-;-;-;-;-;- 1194 + 1 1.939 144459.9 1.0 3622 3444 7059 DOHH2_400M_050219_2,7068 DOHH2_400M_050219_2,7068,ISGIVILSDF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7069 38.33 800.0 114050.0 25 0 5889.6 -1 YLFYCKNCRFY 11 105 788.8549023906082 1575.6952518480164 2 788.8551513552666 MULTI CID FTMS 0 0 0 7059 101680.5703125 0.1231215494574828 4 -0.292144775390625 10 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 2 {[QN]|[E{I|L}]|[KN]}[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQNA{M(Oxidation (M))|F}Y 13 -1 + 70.59 0.0 0.0 4.4799 4.4799 77.259 0.0 0.0 0.0 9.113536715452 55.98552434486329 9.113536715452 6.020599913279639 0 0.7742275032520141 0.958607314841775 0.1861818737241735 2.065463477821985 {[QN]|[E{I|L}]|[KN]}[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}HHEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[CS]{[NV]|[RG]}AQQNA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NHHEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}HHEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}HHEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}HHEA[AG]QNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N[CS]{[NV]|[RG]}AQQNA{M(Oxidation (M))|F}Y 4.4799;4.0978;3.8435;3.5203;3.4652;3.3976;3.2678;3.2678;3.2678;3.0744 -;-;-;-;-;-;-;-;-;- 917 1 1.939 68636.9 0.5799999833106995 3623 3444 7059 DOHH2_400M_050219_2,7069 DOHH2_400M_050219_2,7069,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7070 38.339 478.0 349930.0 25 0 44595.0 + 19417 LETNELDLQQ 10 145 601.7988666319782 1201.5831803307562 2 601.7958251833916 MULTI CID FTMS 0 0 0 7059 76931.375 0.298917957122864 -1 0.0939521789550781 11 Unmodified _LETNELDLQQ_ REV__ENSG00000100503|ENST00000530997|NIN;REV__nc|ENSG00000100503|Q8N4C6-10|NIN;REV__nc|ENSG00000100503|Q8N4C6-11|NIN;REV__nc|ENSG00000100503|Q8N4C6-2|NIN;REV__nc|ENSG00000100503|Q8N4C6-4|NIN;REV__nc|ENSG00000100503|Q8N4C6-5|NIN;REV__nc|ENSG00000100503|Q8N4C6-6|NIN;REV__nc|ENSG00000100503|Q8N4C6-9|NIN;REV__nc|ENSG00000100503|Q8N4C6|NIN 26.268140514670165 0.3785003716575977 2 Y{I|L}{M(Oxidation (M))|F}Y{I|L}ADTS 9 -1 82.935 0.0 0.0 6.9021 0.0 0.0 0.0 125.0724581354125 125.0724581354125 49.58002144185989 0.0 0.0 0.0 0 0.4247425010840047 2.0 2.531234684152075 0.0 Y{I|L}{M(Oxidation (M))|F}Y{I|L}ADTS 6.9021 - 5102 + 1 1.939 121897.4 1.0 3624 3444 7059 DOHH2_400M_050219_2,7070 DOHH2_400M_050219_2,7070,LETNELDLQQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7072 38.343 104.0 628950.0 25 0 62479.0 + 24480 MIEPRTLQY 9 93 583.7966821252453 1165.5788113172905 2 583.7969848513603 MULTI CID FTMS 0 0 0 7071 585619.0 0.6412406552930715 2 -0.108612060546875 1 Oxidation (M) _M(Oxidation (M))IEPRTLQY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 63.960520009940105 0.0238892913700936 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E 3 6 37.447 0.0 0.0 3.2128 0.0 0.0 0.0 773.3939717999655 773.3939717999655 3.6915778689651546 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E 3.2128 + + 163 1 1.939 54172.5 1.0 3625 3445 7071 DOHH2_400M_050219_2,7072 DOHH2_400M_050219_2,7072,MIEPRTLQY True False MIEPRTLQY 38.34346 583.79698485136 29118782.0 7071.0 ENSG00000105193|ENST00000251453|RPS16;;ENST00000601390.1_1_19:39926180-39926535:-|nuORF 8.4886523882548 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7073 38.357 800.0 173270.0 25 0 15082.0 37707 TLPKPSSL 8 182 421.7511096353617 841.4876663375235 2 421.7511169314384 MULTI CID FTMS 0 0 0 7071 80211.7578125 0.3486244229776425 8 -0.6361274719238281 2 Unmodified _TLPKPSSL_ ENST00000479871.1_1_9:116169653-116169776:-|nuORF 9.347437153973935 0.7675937258251505 2 {I|L} 1 7 11.99 0.0 0.0 1.4248 0.0 0.0 710.3927394349829 0.0 710.3927394349829 0.0 1.0155154671948434 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4248 + + 86 + 1 1.939 110509.9 0.4300000071525574 3626 3445 7071 DOHH2_400M_050219_2,7073 DOHH2_400M_050219_2,7073,TLPKPSSL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7075 38.362 35.0 1681500.0 25 0 218660.0 + 7220 EERADLIAY 9 58 540.2716238855018 1078.5286948378034 2 540.2722656130791 MULTI CID FTMS 0 0 0 7074 1527948.375 0.5880713791904028 3 -0.2082672119140625 1 Unmodified _EERADLIAY_ ENSG00000172115|ENST00000305786|CYCS 36.12702656103203 0.0967173616627612 2 {I|L}{I|L}AY 4 5 41.938 0.0 0.0 3.8885 0.0 0.0 600.25062600258 0.0 600.25062600258 0.0 33.354706403678875 0.0 0.0 0 1.0 0.0 0.0 0.0 + {I|L}{I|L}AY 3.8885 + + 20 1 1.939 52600.2 1.0 3627 3446 7074 DOHH2_400M_050219_2,7075 DOHH2_400M_050219_2,7075,EERADLIAY True True EERADLIAY 38.362082 540.272265613079 37936100.0 7074.0 ENSG00000172115|ENST00000305786|CYCS 4.774728933970134 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7076 38.363 44.0 1243200.0 25 0 86586.0 + 457 AEFQRLPSY 9 82 555.7825854824296 1109.550618031659 2 555.7828246951103 MULTI CID FTMS 0 0 0 7074 1309436.125 0.744800204140384 2 -0.1993598937988281 2 Unmodified _AEFQRLPSY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 51.41523569358685 0.0372669606867193 2 {[CP]|[EA]}{M(Oxidation (M))|F}QR{I|L}PSY 9 0 + 69.319 0.0 0.0 6.2475 6.2475 88.23 0.0 0.0 0.0 47.94653786155799 14.09256854528806 14.09256854528806 9.208187539523747 0 2.167735320183944 0.0 1.6549471895720984 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}QR{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}[AG]R{I|L}PSY;{[MS]|[{M(Oxidation (M))|F}A]}EQR{I|L}PSY;{[MS]|[{M(Oxidation (M))|F}A]}E[AG]R{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[H{I|L}]Y;[PS]Y[R{I|L}]QPSY;{[CP]|[EA]}{M(Oxidation (M))|F}[R{I|L}]QPSY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{[CP]|[EA]}{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}{[CP]|[EA]}PSY 6.2475;5.4176;5.0916;4.2617;3.1671;3.0363;2.9816;2.9621;2.943;2.5321 +;-;-;-;-;-;-;-;-;- + 288 + 1 1.939 46763.3 1.0 3628 3446 7074 DOHH2_400M_050219_2,7076 DOHH2_400M_050219_2,7076,AEFQRLPSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7077 38.365 71.0 960420.0 25 0 112130.0 35159 SRPPGGSY 8 92 410.7023709064002 819.3901888796004 2 410.7029601931572 MULTI CID FTMS 0 0 0 7074 727891.5 0.5262103376706372 -1 0.0186233520507812 3 Unmodified _SRPPGGSY_ ENSG00000124313|ENST00000642864|IQSEC2 13.50788311687929 0.7113601687236069 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}SY 7 5 + 36.189 0.0 0.0 4.4166 4.4166 71.1 0.0 0.0 0.0 1.1535656654828583 1.1535656654828583 1.1535656654828583 1.1535656654828583 0 0.8935078169319297 0.0 0.9049471895720984 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}SY;[HM]{I|L}{[VA]|[{I|L}G]}SY;{[CT]|[{M(Oxidation (M))|F}G]}HP{I|L}SY;[HM]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;{[HG]|PP}{M(Oxidation (M))|F}P{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}S{I|L}Y;{[HG]|PP}P{M(Oxidation (M))|F}{I|L}SY;{[CT]|[{M(Oxidation (M))|F}G]}HPS{I|L}Y;{[HG]|PP}{M(Oxidation (M))|F}PS{I|L}Y;{[HG]|PP}P{M(Oxidation (M))|F}S{I|L}Y 4.4166;4.2758;3.9946;3.78;3.2305;2.7454;2.6482;2.3234;1.9563;1.374 -;-;-;-;-;-;-;-;-;- 171 1 1.939 60765.2 1.0 3629 3446 7074 DOHH2_400M_050219_2,7077 DOHH2_400M_050219_2,7077,SRPPGGSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7078 38.368 139.0 460480.0 25 0 37163.0 + + 18959 RSSPLTVTM 9 88 496.26512059417735 990.5156882551548 2 496.2656738162041 MULTI CID FTMS 0 0 0 7074 402645.84375 0.6304218166716312 -1 0.0186233520507812 4 Unmodified _LDEKRVTM_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8 26.88365393820708 0.4786498634179528 2 {[TV]|[{I|L}S]}RREVTM 8 -1 + 48.448 0.0 0.0 4.8912 4.8912 86.397 0.0 0.0 0.0 3.767285528507962 32.004191323397926 3.767285528507962 18.27832488075948 0 1.0 0.958607314841775 0.4247425010840047 0.0 {[TV]|[{I|L}S]}RREVTM;{[TV]|[{I|L}S]}RRTVEM;{[TV]|[{I|L}S]}TRRVEM;{[TV]|[{I|L}S]}T{[QG]|[NA]}{I|L}{I|L}EM;{[DS]|[MA]|[CV]|TT}VRRVEM;{[DS]|[MA]|[CV]|TT}V{[QG]|[NA]}{I|L}{I|L}EM 4.8912;3.0458;3.0458;1.933;1.4702;0.35736 -;-;-;-;-;- 247 1 1.939 54115.0 1.0 3630 3446 7074 DOHH2_400M_050219_2,7078 DOHH2_400M_050219_2,7078,LDEKRVTM False False RSSPLTVTM 38.367768 496.265673816204 3707497.25 7074.0 ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;nc|ENSG00000125885|Q9UJA3-2|MCM8 7.094364166259766 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7079 38.371 154.0 474970.0 25 0 43053.0 + 25514 NENHSGELW 9 104 543.2355771717251 1084.4566014102502 2 543.2360107302666 MULTI CID FTMS 0 0 0 7074 198250.828125 0.8212388914279212 1 -0.0899887084960937 5 Unmodified _NENHSGELW_ ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-3|ILK 22.736283301280096 0.2418982879461534 2 [EP][HM]SW{I|L}W 8 4 [EP][HM]SW + + 26.766 -8.7306 -1.1379 2.4681 2.4681 48.011 0.0 0.0 0.0 0.0 14.739152941678311 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 [EP][HM]SW{I|L}W 2.4681 - 165 + 1 1.939 64181.8 1.0 3631 3446 7074 DOHH2_400M_050219_2,7079 DOHH2_400M_050219_2,7079,NENHSGELW False True NENHSGELW 38.370839 543.236010730267 1826080.625 7074.0 nc|ENSG00000166333|Q13418-3|ILK;;ENSG00000166333|ENST00000299421|ILK 0.668657124042511 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7080 38.379 468.0 270440.0 25 0 9648.2 + 24749 MPFIKSQHEL 10 114 615.3207086202312 1228.6268643072624 2 615.3215820193291 MULTI CID FTMS 0 0 0 7074 171416.78125 0.948220242904062 -1 0.0186233520507812 6 Unmodified _MPFIKSQHEL_ ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH 51.41523569358685 0.0718446036348414 2 MP{M(Oxidation (M))|F}{I|L}K{[QS]|[NT]}H{[QN]|[E{I|L}]|[KN]} 10 0 + 63.674 0.0 0.0 5.1825 5.1825 73.063 0.0 0.0 0.0 30.12856755183767 3.873949984654246 3.873949984654246 0.4142300593978945 0 1.4124379954164592 1.3979400086720375 0.8494850021680094 0.3252574989159953 + + MP{M(Oxidation (M))|F}{I|L}K{[QS]|[NT]}H{[QN]|[E{I|L}]|[KN]};M{I|L}M{I|L}K{[QS]|[NT]}H{[QN]|[E{I|L}]|[KN]};M{I|L}{M(Oxidation (M))|F}PK{[QS]|[NT]}H{[QN]|[E{I|L}]|[KN]};MP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[VP]H{[QN]|[E{I|L}]|[KN]};M{I|L}M{I|L}{M(Oxidation (M))|F}[VP]H{[QN]|[E{I|L}]|[KN]};MP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}[W{I|L}]Y;MP{M(Oxidation (M))|F}{I|L}[RD][HK]W;M{I|L}M{I|L}[RD][HK]W;M{I|L}M{I|L}{M(Oxidation (M))|F}{I|L}[W{I|L}]Y;M{I|L}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[VP]H{[QN]|[E{I|L}]|[KN]} 5.1825;5.1488;4.8067;4.7942;4.7605;4.5481;4.5415;4.5078;4.4334;4.4184 +;-;-;-;-;-;-;-;-;- + 1272 + 1 1.939 98396.9 1.0 3632 3446 7074 DOHH2_400M_050219_2,7080 DOHH2_400M_050219_2,7080,MPFIKSQHEL True True MPFIKSQHEL 38.379137 615.321582019329 986939.625 7074.0 ENSG00000174442|ENST00000307897|ZWILCH;;nc|ENSG00000174442|Q9H900-2|ZWILCH 5.639834562937419 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7081 38.384 274.0 246100.0 25 0 23446.0 + 25521 NENSNIQVL 9 112 515.7612045865867 1029.5078562399733 2 515.7615234255791 MULTI CID FTMS 0 0 0 7074 138278.09375 0.7454040160926714 -1 0.0186233520507812 7 Unmodified _NENSNIQVL_ ENSG00000145216|ENST00000337488|FIP1L1;ENST00000505125.5_1_4:54245288-54325613:+|nuORF;ENST00000513008.5_1_4:54292015-54325613:+|nuORF;ENST00000513975.5_1_4:54244032-54306933:+|nuORF;nc|ENSG00000145216|Q6UN15-3|FIP1L1;nc|ENSG00000145216|Q6UN15-4|FIP1L1;nc|ENSG00000145216|Q6UN15-5|FIP1L1 26.268140514670165 0.1969607489560049 2 {[QD]|[EN]|[WG]|[KD]|[RS]}NSN{I|L} 6 3 30.935 0.0 0.0 3.0048 0.0 0.0 0.0 355.1971511729202 355.1971511729202 11.972849678676202 0.0 0.0 0.0 0 0.0 0.0 0.4291746928241126 0.4247425010840047 + {[QD]|[EN]|[WG]|[KD]|[RS]}NSN{I|L} 3.0048 + + 219 1 1.939 57299.4 1.0 3633 3446 7074 DOHH2_400M_050219_2,7081 DOHH2_400M_050219_2,7081,NENSNIQVL False True NENSNIQVL 38.384201 515.761523425579 1081006.125 7074.0 ENST00000513975.5_1_4:54244032-54306933:+|nuORF;;nc|ENSG00000145216|Q6UN15-3|FIP1L1;;ENST00000505125.5_1_4:54245288-54325613:+|nuORF;;nc|ENSG00000145216|Q6UN15-4|FIP1L1;;ENSG00000145216|ENST00000337488|FIP1L1;;ENST00000513008.5_1_4:54292015-54325613:+|nuORF;;nc|ENSG00000145216|Q6UN15-5|FIP1L1 4.0737987359364825 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7082 38.388 194.0 324890.0 25 0 19536.0 + 6919 EEFNRQVSF 9 106 578.2751513384238 1154.5357497436476 2 578.2752563357353 MULTI CID FTMS 0 0 0 7074 137977.65625 0.4070976090667648 -1 0.0186233520507812 8 Unmodified _EEFNRQVSF_ ENST00000507415.1_1_5:138699473-138699677:+|nuORF 80.6760300276096 0.0173529540220427 2 EE{M(Oxidation (M))|F}NG[Q{I|L}][TA]{M(Oxidation (M))|F} 10 4 + 51.877 0.0 0.0 4.4933 4.4933 79.187 0.0 0.0 0.0 14.678024757013262 6.923487412610356 6.923487412610356 7.941905711336759 0 0.805462187404089 1.6989700043360187 0.0 0.0 EE{M(Oxidation (M))|F}NG[Q{I|L}][TA]{M(Oxidation (M))|F};EE[YT][RP]VD{M(Oxidation (M))|F};EE{M(Oxidation (M))|F}NG[Q{I|L}][VG]Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q][RP]VD{M(Oxidation (M))|F};{[ET]|[MV]}[YE][RP]VD{M(Oxidation (M))|F};[DP][Y{M(Oxidation (M))|F}][RP]VD{M(Oxidation (M))|F} 4.4933;3.8054;3.5597;2.0594;1.923;1.1949 -;-;-;-;-;- 117 + 1 1.939 52316.6 1.0 3634 3446 7074 DOHH2_400M_050219_2,7082 DOHH2_400M_050219_2,7082,EEFNRQVSF True True EEFNRQVSF 38.387924 578.275256335735 1562014.25 7074.0 ENST00000507415.1_1_5:138699473-138699677:+|nuORF 8.493924776713053 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7083 38.397 524.0 244570.0 25 0 39076.0 + 10324 FSDVNMQEY 9 138 566.7345498561734 1131.4545467791468 2 566.7346069216728 MULTI CID FTMS 0 0 0 7074 129467.2734375 0.7607916161019719 1 -0.0899887084960937 9 Unmodified _FSDVNMQEY_ ENSG00000067066|ENST00000340126|SP100;nc|ENSG00000067066|P23497-2|SP100;nc|ENSG00000067066|P23497-3|SP100;nc|ENSG00000067066|P23497-5|SP100;nc|ENSG00000067066|P23497-6|SP100;nc|ENSG00000067066|P23497-7|SP100;nc|ENSG00000067066|P23497|SP100 36.12702656103203 0.0967173616627612 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVNM 6 3 24.453 0.0 0.0 2.1612 0.0 0.0 0.0 435.1514821641656 435.1514821641656 1.005432046207826 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.5402877273156862 0.2887254899964357 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVNM 2.1612 + + 1437 1 1.939 100213.9 1.0 3635 3446 7074 DOHH2_400M_050219_2,7083 DOHH2_400M_050219_2,7083,FSDVNMQEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7084 38.402 257.0 293020.0 25 0 19342.0 + 397 AEDSARTLLY 10 126 569.7910507430097 1137.5675485528193 2 569.7920410037041 MULTI CID FTMS 0 0 0 7074 118595.2890625 0.9702393488052756 -1 0.0186233520507812 10 Unmodified _AEDSARTLLY_ ENSG00000174989|ENST00000652555|FBXW8;nc|ENSG00000174989|Q8N3Y1-2|FBXW8 29.43715596616401 0.3072975788498757 2 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HKCT{I|L}{I|L}Y 9 6 + 42.573 0.0 0.0 3.7425 3.7425 72.785 0.0 0.0 0.0 4.137342758552691 27.96388461952553 4.137342758552691 4.13811573052314 0 1.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HKCT{I|L}{I|L}Y;[TA][EP]KCT{I|L}{I|L}Y;{[CP]|[EA]}[TP]KCT{I|L}{I|L}Y;{[CT]|[{M(Oxidation (M))|F}G]}GHKCT{I|L}{I|L}Y;{[ET]|[MV]}[PA]KCT{I|L}{I|L}Y;{[CP]|[EA]}D[RP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HK{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HK{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}Y;[TA][EP]K{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Y;{[CP]|[EA]}[TP]K{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Y 3.7425;3.3787;3.3725;3.3375;3.0289;2.9989;2.888;2.7557;2.5243;2.5181 -;-;-;-;-;-;-;-;-;- 404 1 1.939 57297.9 1.0 3636 3446 7074 DOHH2_400M_050219_2,7084 DOHH2_400M_050219_2,7084,AEDSARTLLY False True AEDSARTLLY 38.401934 569.792041003704 1525472.125 7074.0 ENSG00000174989|ENST00000652555|FBXW8;;nc|ENSG00000174989|Q8N3Y1-2|FBXW8 6.813729286193848 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7085 38.414 682.0 147500.0 25 0 9617.1 + 5187 DIQKRFGL 8 122 488.78263209275633 975.5507112523128 2 488.7835571169853 MULTI CID FTMS 0 0 0 7074 122721.703125 0.1579912310740956 4 -0.3176116943359375 11 Unmodified _DIQKRFGL_ ENSG00000168653|ENST00000372969|NDUFS5 30.22481116460888 0.4082965392918993 2 D{I|L}QK{I|L}[{M(Oxidation (M))|F}V]E 8 3 {I|L}[{M(Oxidation (M))|F}V]E + + 56.498 14.693 3.0092 5.7914 5.7914 58.687 0.0 0.0 0.0 41.75628044033559 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.4247425010840047 D{I|L}QK{I|L}[{M(Oxidation (M))|F}V]E 5.7914 - 305 + 1 1.939 81576.9 1.0 3637 3446 7074 DOHH2_400M_050219_2,7085 DOHH2_400M_050219_2,7085,DIQKRFGL False True DIQKRFGL 38.413791 488.783557116985 12608644.0 7074.0 ENSG00000168653|ENST00000372969|NDUFS5 4.391527096430461 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7086 38.418 228.0 155830.0 25 0 7948.2 + 39805 VESKLSMYY 9 81 560.2725900815926 1118.5306272299852 2 560.2720825076103 MULTI CID FTMS 0 0 0 7074 103065.59375 0.1357145320223599 4 -0.3176116943359375 12 Unmodified _VESKLSMYY_ REV__ENSG00000032219|ENST00000355431|ARID4A;REV__nc|ENSG00000032219|P29374-2|ARID4A;REV__nc|ENSG00000032219|P29374-3|ARID4A 7.910154910731844 0.6385446671287552 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}W 9 -1 43.433 0.0 0.0 3.8831 0.0 0.0 0.0 82.06692682437733 82.06692682437733 32.17420967618249 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTN{[VA]|[{I|L}G]}W 3.8831 - 413 + 1 1.939 31489.4 1.0 3638 3446 7074 DOHH2_400M_050219_2,7086 DOHH2_400M_050219_2,7086,VESKLSMYY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7087 38.427 410.0 1089600.0 25 0 124000.0 + 2534 ASDRNIVLY 9 170 525.7822224639784 1049.5498919947568 2 525.7823364138603 MULTI CID FTMS 0 0 0 7074 94221.7734375 0.008122623393965 -3 0.186737060546875 13 Unmodified _ASDRNIVLY_ ENSG00000164934|ENST00000612750|DCAF13 38.17557092003332 0.0854718145212029 2 {[SA]|[TG]}[RD]N{I|L}V{I|L}Y 9 0 + 61.117 0.0 0.0 5.8231 5.8231 77.024 0.0 0.0 0.0 1.3129833735282048 6.770558279134953 1.3129833735282048 1.3129833735282048 0 1.0 0.8538719643217619 0.25 1.098136244196333 + + {[SA]|[TG]}[RD]N{I|L}V{I|L}Y;[{I|L}V]EPSMV{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}N{I|L}V{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}N{I|L}V{I|L}Y;[{I|L}V]EP{M(Oxidation (M))|F}AV{I|L}Y;[{I|L}V]E[WE]V{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}{I|L}PSMV{I|L}Y;{[SA]|[TG]}[RD]GG{I|L}V{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}[WE]{I|L}V{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}RAV{I|L}Y 5.8231;5.698;5.6554;5.3675;5.2691;5.0359;4.9972;4.9458;4.871;4.8326 +;-;-;-;-;-;-;-;-;- + 2265 1 1.939 344235.9 1.0 3639 3446 7074 DOHH2_400M_050219_2,7087 DOHH2_400M_050219_2,7087,ASDRNIVLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7088 38.429 106.0 490770.0 25 0 64706.0 + + 18995 AEIPADPKLY 10 82 558.3122899927076 1114.6100270522152 2 558.3141357302666 MULTI CID FTMS 0 0 0 7074 566366.375 0.2062615326808189 3 -0.2082672119140625 14 Unmodified _LDHKFNKLT_ nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-4|DOCK8;ENSG00000107099|ENST00000432829|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8 10.073929032068715 0.563993802247229 2 {I|L}D{I|L} 3 -1 36.911 0.0 0.0 3.3116 0.0 0.0 0.0 770.3700045221311 770.3700045221311 24.436974992327123 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {I|L}D{I|L} 3.3116 - 80 + 1 1.939 44024.4 1.0 3640 3446 7074 DOHH2_400M_050219_2,7088 DOHH2_400M_050219_2,7088,LDHKFNKLT False False AEIPADPKLY 38.428872 558.314135730267 878880.5 7074.0 nc|ENSG00000107099|Q8NF50-3|DOCK8;;nc|ENSG00000107099|Q8NF50-4|DOCK8;;ENSG00000107099|ENST00000432829|DOCK8;;nc|ENSG00000107099|Q8NF50-2|DOCK8 3.3429537614186606 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7089 38.443 800.0 223950.0 25 0 28365.0 -1 0 108 948.9633719373256 1895.912190941452 2 948.9637328982352 MULTI CID FTMS 0 0 0 7074 160015.71875 1.0 0 0.0 15 2 H{I|L}PN{I|L}N[YN]YVTEN{I|L} 14 -1 103.47 0.0 0.0 5.4574 0.0 0.0 0.0 208.0729158990844 208.0729158990844 67.26298192025737 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.8494850021680094 1.610924374808178 H{I|L}PN{I|L}N[YN]YVTEN{I|L} 5.4574 - 3171 + 1 1.939 122565.3 0.5799999833106995 3641 3446 7074 DOHH2_400M_050219_2,7089 DOHH2_400M_050219_2,7089, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7090 38.447 244.0 269370.0 25 0 29707.0 + 27274 PHGKVSSK 8 99 420.2412416327421 838.4679303322843 2 420.7435485720634 MULTI CID FTMS 0 0 0 7074 155484.328125 0.7121424875099502 1 -0.0899887084960937 16 Unmodified _PHGKVSSK_ REV__ENSG00000135315|ENST00000403245|CEP162;REV__ENST00000497936.5_1_6:84884653-84936120:-|nuORF;REV__nc|ENSG00000135315|Q5TB80-2|CEP162 2.302733041254933 0.8103549651115762 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.939 59166.1 1.0 3642 3446 7074 DOHH2_400M_050219_2,7090 DOHH2_400M_050219_2,7090,PHGKVSSK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7092 38.452 57.0 817680.0 25 0 166140.0 + 1199 AIDNPLHY 8 61 471.7377104612344 0 471.7376891970634 PEAK CID FTMS 0 0 0 7091 727454.375 0.5007524664896428 2 -0.1182785034179687 1 Unmodified _AIDNPLHY_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 26.34127834903884 0.298120260672589 2 A 1 7 6.9897 0.0 0.0 0.74243 0.0 0.0 785.3343859109469 82.06685053043202 867.401236441379 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.74243 + + 27 + 1 1.939 42853.7 1.0 3643 3447 7091 DOHH2_400M_050219_2,7092 DOHH2_400M_050219_2,7092,AIDNPLHY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7093 38.454 65.0 932860.0 25 0 78817.0 + -1 LPSAEKPLC 9 81 507.7662281205648 1013.5179033079296 2 507.7665283083916 MULTI CID FTMS 0 0 0 7091 899621.6875 1.0 0 0.0 2 Carbamidomethyl (C) _LPSAEKPLC(Carbamidomethyl (C))_ REV__ENSG00000122741|ENST00000377724|DCAF10;REV__nc|ENSG00000122741|Q5QP82-2|DCAF10 24.67388899826682 0.2172451872415813 2 {[CP]|[EA]}SP{I|L}KPSW 9 -1 + 52.101 0.0 0.0 5.1406 5.1406 89.498 0.0 0.0 0.0 24.38084305890683 8.908555305749317 8.908555305749317 52.10077508221467 0 0.9247425010840048 0.0 0.0 0.0 {[CP]|[EA]}SP{I|L}KPSW 5.1406 - 209 + 1 1.939 53421.0 1.0 3644 3447 7091 DOHH2_400M_050219_2,7093 DOHH2_400M_050219_2,7093,LPSAEKPLC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7094 38.455 43.0 858780.0 25 0 56630.0 + -1 KVPQVSTPTLVEVSR 15 77 547.3209409467048 546.3136644801048 1 547.3171874880791 MULTI CID FTMS 0 0 0 7091 724811.25 0.7596621269619862 -1 0.0899887084960937 3 P02768-1;ENSG00000163631|ENST00000295897|ALB;nc|ENSG00000163631|P02768-3|ALB;nc|ENSG00000163631|P02768-2|ALB;P02769 2 [VS]VSR 5 -1 + 15.784 0.0 0.0 2.8892 2.8892 79.595 0.0 0.0 0.0 -0.9691001300805624 4.101523083377465 -0.9691001300805624 15.783960731301685 0 0.0 0.0 0.0 0.0 [VS]VSR 2.8892 - 41 + 1 1.939 37132.0 1.0 3645 3447 7091 DOHH2_400M_050219_2,7094 DOHH2_400M_050219_2,7094, False False KVPQVSTPTLVEVSR 38.45489 547.317187488079 9633753.625 7091.0 P02768-1;;ENSG00000163631|ENST00000295897|ALB;;nc|ENSG00000163631|P02768-3|ALB;;nc|ENSG00000163631|P02768-2|ALB;;P02769 11.003462473551432 3.0 False 15.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7095 38.456 62.0 802860.0 25 0 90131.0 -1 0 69 632.9781758485349 1895.9126981458044 3 633.3126708865166 MULTI CID FTMS 0 0 0 7091 713956.1875 1.0 0 0.0 4 2 [H{I|L}][NP]{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 16 -1 + 71.054 0.0 0.0 3.7478 3.7478 82.983 0.0 0.0 0.0 22.21848749616356 63.09562510389476 22.21848749616356 22.78151250383644 0 0.3252574989159953 1.6989700043360187 0.0 0.0 [H{I|L}][NP]{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]};[Q{I|L}][YG]{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}[KS];[NP][H{I|L}]{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}[KS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WK]NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}[KS] 3.7478;2.5462;2.3242;1.9485 -;-;-;- 158 1 1.939 44567.2 1.0 3646 3447 7091 DOHH2_400M_050219_2,7095 DOHH2_400M_050219_2,7095, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7096 38.459 95.0 567630.0 25 0 42104.0 + 15796 ISEQTGKELLY 11 93 640.8403681942629 1279.6661834553256 2 640.8403808474541 MULTI CID FTMS 0 0 0 7091 603445.6875 0.5511319028262893 -2 0.108612060546875 5 Unmodified _ISEQTGKELLY_ ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY 83.27773906761396 0.0052189922445383 2 {[TV]|[{I|L}S]}E[KA]QES{I|L}{I|L}Y 11 5 + 77.674 0.0 0.0 6.0699 6.0699 77.102 0.0 0.0 0.0 14.176227042599294 37.09554154808197 14.176227042599294 0.7355755364280441 0 0.8807196863200843 1.3010299956639813 1.7376954943324543 1.0 {[TV]|[{I|L}S]}E[KA]QES{I|L}{I|L}Y;{[TV]|[{I|L}S]}ERRQC{I|L}{I|L}Y;{[TV]|[{I|L}S]}E[KA]QSE{I|L}{I|L}Y;{[TV]|[{I|L}S]}EQ[KA]ES{I|L}{I|L}Y;{[TV]|[{I|L}S]}EQRRC{I|L}{I|L}Y;{[TV]|[{I|L}S]}EQ[KA]SE{I|L}{I|L}Y;{[TV]|[{I|L}S]}{[QS]|[NT]}{I|L}QES{I|L}{I|L}Y;{[TV]|[{I|L}S]}[KA]EQES{I|L}{I|L}Y;{[TV]|[{I|L}S]}{[QS]|[NT]}{I|L}QSE{I|L}{I|L}Y;{[TV]|[{I|L}S]}[KA]EQSE{I|L}{I|L}Y 6.0699;6.0124;5.9109;5.8969;5.8394;5.738;5.6622;5.6003;5.5033;5.4414 -;-;-;-;-;-;-;-;-;- 3709 1 1.939 52215.4 1.0 3647 3447 7091 DOHH2_400M_050219_2,7096 DOHH2_400M_050219_2,7096,ISEQTGKELLY True True ISEQTGKELLY 38.458517 640.840380847454 6185591.5 7091.0 ENSG00000131473|ENST00000352035|ACLY;;nc|ENSG00000131473|P53396-2|ACLY;;nc|ENSG00000131473|P53396-3|ACLY 7.161892255147298 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7097 38.461 113.0 613570.0 25 0 103380.0 -1 RRSLAAGP 8 97 435.2510543401133 868.4875557470267 2 435.2508422732353 MULTI CID FTMS 0 0 0 7091 511137.78125 0.8463907944624782 -2 0.108612060546875 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RRSLAAGP_ chr19:6470366-6471406|18|13.33|0.35|5.23|-|0|DENND1C,DENND1C|1 2.889219685676258 0.8067950007271085 2 A 1 -1 0.48455 0.0 0.0 0.055792 0.0 0.0 554.3231708366736 240.0970705621704 794.4202413988439 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.055792 + + 5 + 1 1.939 58138.5 1.0 3648 3447 7091 DOHH2_400M_050219_2,7097 DOHH2_400M_050219_2,7097,RRSLAAGP False False False False splicing PXD020620_cell_line DOHH2_400M_050219_2 7098 38.464 150.0 356600.0 25 0 23859.0 + 35155 SRPDSILGMQF 11 84 625.8131627862479 1249.6117726392956 2 625.8134643435478 MULTI CID FTMS 0 0 0 7091 375091.3125 0.5414911309104256 -1 0.0899887084960937 7 Unmodified _SRPDSILGMQF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 36.506200033944 0.2662161991516171 2 [Q{I|L}]KQEQAMQ{M(Oxidation (M))|F} 10 -1 + 72.834 0.0 0.0 5.8285 5.8285 86.106 0.0 0.0 0.0 4.259687322722812 55.0250858389421 4.259687322722812 9.164539485499262 0 0.7059771852360797 0.0 0.3807196863200844 1.8882104921644447 [Q{I|L}]KQEQAMQ{M(Oxidation (M))|F};[Q{I|L}]KQEQAM[AG]{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQAMQ{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]AMQ{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{[VA]|[{I|L}G]}KQAMQ{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Q{I|L}]KQAMQ{M(Oxidation (M))|F};[QA]E{[VA]|[{I|L}G]}KQAMQ{M(Oxidation (M))|F};[Q{I|L}]KQK{[CP]|[EA]}MQ{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQAM[AG]{M(Oxidation (M))|F};[Q{I|L}]K[AG]E[AG]AMQ{M(Oxidation (M))|F} 5.8285;5.0951;5.0951;5.0951;4.8791;4.7495;4.4705;4.4699;4.3646;4.3646 -;-;-;-;-;-;-;-;-;- 627 1 1.939 51429.7 1.0 3649 3447 7091 DOHH2_400M_050219_2,7098 DOHH2_400M_050219_2,7098,SRPDSILGMQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7099 38.469 253.0 282440.0 25 0 13960.0 -1 0 84 771.7012309045275 2312.0818633137824 3 772.0359985232353 MULTI CID FTMS 0 0 0 7091 307065.34375 0.6385399548087377 -1 0.0899887084960937 8 2 TGYG{M(Oxidation (M))|F} 5 -1 26.414 0.0 0.0 1.1425 0.0 0.0 1161.501164063289 622.3675579977438 1783.8687220610327 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 TGYG{M(Oxidation (M))|F} 1.1425 - 449 + 1 1.939 56895.4 1.0 3650 3447 7091 DOHH2_400M_050219_2,7099 DOHH2_400M_050219_2,7099, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7100 38.474 275.0 385740.0 25 0 44459.0 + 20497 LLLERAKEL 9 103 542.8397443865634 1083.6649358399268 2 542.8398925662041 MULTI CID FTMS 0 0 0 7091 269826.75 1.0 0 0.0 9 Unmodified _LLLERAKEL_ ENSG00000115758|ENST00000234111|ODC1 53.40400417844725 0.0329064971918313 2 {I|L}{I|L}{I|L}E 4 5 66.983 0.0 0.0 6.1811 0.0 0.0 0.0 612.348455004503 612.348455004503 44.20310309343897 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.2302046884880935 0.0 + {I|L}{I|L}{I|L}E 6.1811 + + 221 + 1 1.939 81634.5 1.0 3651 3447 7091 DOHH2_400M_050219_2,7100 DOHH2_400M_050219_2,7100,LLLERAKEL True True LLLERAKEL 38.473671 542.839892566204 1332800.25 7091.0 ENSG00000115758|ENST00000234111|ODC1 1.5751257240772247 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7101 38.478 241.0 263540.0 25 0 38724.0 + 31761 RSDTPLIY 8 88 482.7584718005593 963.5023906679186 2 482.7585327029228 MULTI CID FTMS 0 0 0 7091 265989.53125 0.2723581325301012 3 -0.2276229858398437 10 Unmodified _RSDTPLIY_ ENSG00000196305|ENST00000443024|IARS1 19.256988751693697 0.6264283240490721 2 {M(Oxidation (M))|F}{I|L}Y 3 6 31.555 0.0 0.0 3.275 0.0 0.0 522.3037955524874 0.0 522.3037955524874 0.0 21.639723038299667 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}Y 3.275 - 49 + 1 1.939 53623.7 1.0 3652 3447 7091 DOHH2_400M_050219_2,7101 DOHH2_400M_050219_2,7101,RSDTPLIY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7102 38.482 173.0 297010.0 25 0 42298.0 14954 ILMVNQPV 8 80 457.2641402460201 912.5137275588404 2 457.2641784548759 MULTI CID FTMS 0 0 0 7091 255811.421875 1.0 0 0.0 11 Unmodified _ILMVNQPV_ chr16:28986446-28986657|12|15.0|0.21|6.17|+|0|LAT,LAT|1 5.760428011301431 0.7893668129297577 2 {I|L} 1 7 10.713 0.0 0.0 1.174 0.0 0.0 781.4189074678231 0.0 781.4189074678231 0.0 -10.255762612236907 -10.255762612236907 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.174 + + 11 + 1 1.939 47884.0 1.0 3653 3447 7091 DOHH2_400M_050219_2,7102 DOHH2_400M_050219_2,7102,ILMVNQPV False False False False splicing PXD020620_cell_line DOHH2_400M_050219_2 7103 38.485 204.0 422340.0 25 0 18662.0 + 25904 NLKLKLHSF 9 133 367.2250868786173 1098.6534312360518 3 367.2248107790947 MULTI CID FTMS 0 0 0 7091 247512.875 0.5384895650298047 -1 0.0899887084960937 12 Unmodified _NLKLKLHSF_ ENSG00000162521|ENST00000373493|RBBP4;ENST00000502424.1_1_5:14797477-14798464:-|nuORF;nc|ENSG00000162521|Q09028-2|RBBP4;nc|ENSG00000162521|Q09028-3|RBBP4;nc|ENSG00000162521|Q09028-4|RBBP4 47.7319792270244 0.0453426645642791 2 N{I|L}K{I|L}K{I|L}HS{M(Oxidation (M))|F} 9 0 + 96.877 0.0 0.0 8.8178 8.8178 99.114 0.0 0.0 0.0 80.22126774895685 13.46787486224656 13.46787486224656 89.30611793774335 0 0.1803115997617927 1.6989700043360187 1.7658715643802767 0.3494850021680094 + + N{I|L}K{I|L}K{I|L}HS{M(Oxidation (M))|F};[H{I|L}][K{I|L}]S{M(Oxidation (M))|F}[K{I|L}]N;[HS]{M(Oxidation (M))|F}{I|L}K{I|L}[K{I|L}]N;[K{I|L}][H{I|L}]S{M(Oxidation (M))|F}[K{I|L}]N 8.8178;0.68908;0.3175;0.2548 +;-;-;- + 215 + 1 1.939 72399.0 1.0 3654 3447 7091 DOHH2_400M_050219_2,7103 DOHH2_400M_050219_2,7103,NLKLKLHSF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7104 38.499 800.0 360440.0 25 0 27510.0 + 21468 LPHNRLVSL 9 262 350.2138287038059 1047.6196567116178 3 350.2139770388603 MULTI CID FTMS 0 0 0 7091 116975.4609375 1.0 0 0.0 13 Unmodified _LPHNRLVSL_ ENSG00000163428|ENST00000295628|LRRC58 47.7319792270244 0.0453426645642791 2 {I|L}VSP{I|L}{I|L} 6 6 47.542 0.0 0.0 4.5381 0.0 0.0 407.2026539533219 0.0 407.2026539533219 0.0 24.5217596488785 0.0 0.0 0 0.4247425010840047 0.0 1.2059771852360797 0.0 {I|L}VSP{I|L}{I|L} 4.5381 - 920 1 1.939 231157.2 0.8600000143051147 3655 3447 7091 DOHH2_400M_050219_2,7104 DOHH2_400M_050219_2,7104,LPHNRLVSL True True LPHNRLVSL 38.499215 350.21397703886 623254.9375 7091.0 ENSG00000163428|ENST00000295628|LRRC58 3.514077583948771 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7105 38.513 800.0 100960.0 25 0 19317.0 -1 EMYQELMEMCH 11 89 766.7780767494886 1531.5416005657771 2 766.7769653201103 MULTI CID FTMS 0 0 0 7091 115817.1171875 0.4468992475908225 6 -0.5275154113769531 14 Carbamidomethyl (C),2 Oxidation (M) _EMYQELM(Oxidation (M))EM(Oxidation (M))C(Carbamidomethyl (C))H_ ENSG00000144010|ENST00000639673|TRIM43B;ENSG00000144015|ENST00000272395|TRIM43 1.3295316138638542 0.8688751186870782 2 [MT]YDSN 6 -1 28.019 0.0 0.0 1.8295 0.0 0.0 0.0 817.2840071422021 817.2840071422021 3.374269747458765 0.0 0.0 0.0 0 0.5 0.0 0.2396518287104437 0.4247425010840047 [MT]YDSN 1.8295 - 265 1 1.939 62301.3 0.5899999737739563 3656 3447 7091 DOHH2_400M_050219_2,7105 DOHH2_400M_050219_2,7105,EMYQELMEMCH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7106 38.517 225.0 278040.0 25 0 32602.0 + 39347 VAGAEPRR 8 100 428.243609129672 854.4726653261439 2 428.2439147830009 MULTI CID FTMS 0 0 0 7091 117054.3203125 0.901419974044462 -4 0.2767257690429687 15 Unmodified _VAGAEPRR_ REV__ENST00000441788.6_1_19:3506381-3522955:+|nuORF 2.577480529830294 0.808687252328423 2 H 1 -1 10.969 0.0 0.0 1.2837 0.0 0.0 699.4030680134471 0.0 699.4030680134471 0.0 2.430380486862944 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.2837 - 16 + 1 1.939 53818.9 1.0 3657 3447 7091 DOHH2_400M_050219_2,7106 DOHH2_400M_050219_2,7106,VAGAEPRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7107 38.531 800.0 473960.0 25 0 53452.0 + + -1 VVDPDEKSIMTY 12 156 698.8368299247848 1395.6591069163694 2 698.8356201052666 MULTI CID FTMS 0 0 0 7091 103578.15625 0.0622248132167303 -3 0.1827735900878906 16 Oxidation (M) _MHMVLLEM(Oxidation (M))LTY_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 36.12702656103203 0.2720571796884491 2 VVDP{[QG]|[NA]}M{I|L}HHTY 12 -1 + 112.35 0.0 0.0 8.0498 8.0498 82.418 0.0 0.0 0.0 46.40871530755108 7.385551262424457 7.385551262424457 1.1928031367991565 0 1.6906140654642812 2.0 2.559894379144197 0.0 VVDP{[QG]|[NA]}M{I|L}HHTY;VVDP{[QG]|[NA]}M[KQ]MTY;VVDP[C(Carbamidomethyl (C))R][KQ]MTY;VVDP[WK]DHHTY;VVDP{[QG]|[NA]}M{I|L}S[HQ]W;VVDP{[QG]|[NA]}P{M(Oxidation (M))|F}HHTY;VVDP[NS]{I|L}S[SG]TGTY;VVDP{[QG]|[NA]}C[RK]MTY;VVDPDNS{I|L}SPDA[PA];VVDP[NS]D{I|L}SPDA[PA] 8.0498;7.9644;7.2576;7.1661;7.0473;7.029;6.9247;6.9139;6.8562;6.8224 -;-;-;-;-;-;-;-;-;- 65609 + 1 1.939 267435.3 0.5699999928474426 3658 3447 7091 DOHH2_400M_050219_2,7107 DOHH2_400M_050219_2,7107,MHMVLLEMLTY False False VVDPDEKSIMTY 38.531121 698.835620105267 20442940.0 7091.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 7.179877758026123 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7108 38.535 144.0 512820.0 25 0 70519.0 + 1071 AGHPHIITL 9 89 479.7772605044344 957.5399680756688 2 479.7770873904228 MULTI CID FTMS 0 0 0 7091 91563.859375 0.1016643173189775 -3 0.1827735900878906 17 Unmodified _AGHPHIITL_ ENSG00000156873|ENST00000563588|PHKG2;nc|ENSG00000156873|P15735-2|PHKG2 26.34127834903884 0.1960301806784604 2 [{I|L}T]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}E{I|L} 8 6 + 25.596 0.0 0.0 2.6731 2.6731 70.296 0.0 0.0 0.0 1.3431156469699346 4.424712680444358 1.3431156469699346 4.208187539523749 0 0.2742275032520141 1.3979400086720375 0.0 0.0 [{I|L}T]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]{I|L}{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[HQ]{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[WR]{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[HQ]T{I|L};{[QN]|[E{I|L}]|[KN]}[QT]{I|L}{I|L}E{I|L};{I|L}{I|L}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VP]{I|L} 2.6731;2.2336;2.2336;1.7498;1.7353;1.6893;1.6765;0.92674 -;-;-;-;-;-;-;- 126 1 1.939 62561.8 1.0 3659 3447 7091 DOHH2_400M_050219_2,7108 DOHH2_400M_050219_2,7108,AGHPHIITL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7109 38.538 120.0 391070.0 25 0 25318.0 + 2528 ASDPFFRHY 9 85 380.5135933109689 1138.5189505331068 3 380.5136596560478 MULTI CID FTMS 0 0 0 7091 89493.5703125 0.2048185927136415 -3 0.1827735900878906 18 Unmodified _ASDPFFRHY_ ENSG00000142751|ENST00000374135|GPN2;ENST00000477418.2_1_1:27206170-27212721:-|nuORF 14.838274106304384 0.4350285940865338 2 {[WS]|[C(Carbamidomethyl (C)){I|L}]}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 6 4 20.635 0.0 0.0 1.8124 0.0 0.0 0.0 308.14814172916255 308.14814172916255 4.69273760456403 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 1.8124 - 73 + 1 1.939 43929.2 1.0 3660 3447 7091 DOHH2_400M_050219_2,7109 DOHH2_400M_050219_2,7109,ASDPFFRHY False True ASDPFFRHY 38.537956 380.513659656048 4999385.875 7091.0 ENSG00000142751|ENST00000374135|GPN2;;ENST00000477418.2_1_1:27206170-27212721:-|nuORF 4.880976378917694 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7110 38.552 800.0 169970.0 25 0 13799.0 + 15793 NLKLKLHSF 9 162 550.7484567406758 1099.4823605481515 2 550.7482787966728 MULTI CID FTMS 0 0 0 7091 87424.4140625 0.1049919649233815 4 -0.3486289978027344 19 Unmodified _ISEQNFEAY_ nc|ENSG00000162521|Q09028-4|RBBP4;nc|ENSG00000162521|Q09028-3|RBBP4;ENST00000502424.1_1_5:14797477-14798464:-|nuORF;nc|ENSG00000162521|Q09028-2|RBBP4;ENSG00000162521|ENST00000373493|RBBP4 13.50788311687929 0.4710407108020397 2 K{I|L}K{I|L}HS{M(Oxidation (M))|F} 7 8 47.226 0.0 0.0 4.2953 0.0 0.0 227.953177475288 0.0 227.953177475288 0.0 31.46874206298464 0.0 0.0 0 0.0 0.0 1.394599018282542 0.3807196863200844 K{I|L}K{I|L}HS{M(Oxidation (M))|F} 4.2953 - 524 + 1 1.939 104478.0 0.4699999988079071 3661 3447 7091 DOHH2_400M_050219_2,7110 DOHH2_400M_050219_2,7110,ISEQNFEAY False True NLKLKLHSF 38.551788 550.748278796673 4063305.125 7091.0 nc|ENSG00000162521|Q09028-4|RBBP4;;nc|ENSG00000162521|Q09028-3|RBBP4;;ENST00000502424.1_1_5:14797477-14798464:-|nuORF;;nc|ENSG00000162521|Q09028-2|RBBP4;;ENSG00000162521|ENST00000373493|RBBP4 5.36463991800944 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7111 38.557 262.0 291000.0 25 0 13302.0 + 533 AEIDEPNAF 9 116 503.2291879288336 1004.4438229244672 2 503.2298156619072 MULTI CID FTMS 0 0 0 7091 195875.390625 1.0 0 0.0 20 Unmodified _AEIDEPNAF_ ENSG00000139645|ENST00000267116|ANKRD52 34.10243960390752 0.1078313939113124 2 {M(Oxidation (M))|F} 1 8 11.99 0.0 0.0 1.1937 0.0 0.0 839.3977088881375 0.0 839.3977088881375 0.0 1.1522446068913703 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.1937 + + 177 + 1 1.939 63101.6 1.0 3662 3447 7091 DOHH2_400M_050219_2,7111 DOHH2_400M_050219_2,7111,AEIDEPNAF True True AEIDEPNAF 38.556654 503.229815661907 960848.375 7091.0 ENSG00000139645|ENST00000267116|ANKRD52 5.102319240570068 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7113 38.562 59.0 939610.0 25 0 164600.0 + 9841 FPENKKQPY 9 59 575.7994555006755 1149.584358068151 2 575.7999145388603 MULTI CID FTMS 0 0 0 7112 728762.375 0.0235713170066582 5 -0.4181442260742187 1 Unmodified _FPENKKQPY_ ENSG00000051382|ENST00000674063|PIK3CB;ENST00000481749.5_1_3:138374233-138426144:-|nuORF 39.957323273325 0.0756908302845263 2 M{I|L}EY 4 7 60.455 0.0 0.0 5.2589 0.0 0.0 0.0 610.3324068658811 610.3324068658811 37.18383807764848 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3494850021680094 0.0 M{I|L}EY 5.2589 - 36 + 1 1.941 46247.4 1.0 3663 3448 7112 DOHH2_400M_050219_2,7113 DOHH2_400M_050219_2,7113,FPENKKQPY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7114 38.566 183.0 211720.0 25 0 15997.0 6404 DYHQLSVY 8 81 512.7400857526277 1023.4656185720554 2 512.7405883669853 MULTI CID FTMS 0 0 0 7112 121373.78125 0.193969728232897 2 -0.1182518005371093 2 Unmodified _DYHQLSVY_ ENSG00000198919|ENST00000361582|DZIP3;ENST00000495008.5_1_3:108355483-108366962:+|nuORF 18.13498045792455 0.6430038125133779 2 VY 2 6 23.711 0.0 0.0 2.3168 0.0 0.0 743.322870624593 0.0 743.322870624593 0.0 11.237125054200234 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + VY 2.3168 + + 54 + 1 1.941 37186.3 1.0 3664 3448 7112 DOHH2_400M_050219_2,7114 DOHH2_400M_050219_2,7114,DYHQLSVY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7116 38.57 53.0 1143500.0 25 0 78775.0 + 30550 RENDIKSYF 9 71 586.2907770642856 1170.5670011953712 2 586.2908813357353 MULTI CID FTMS 0 0 0 7115 942755.0 0.7921567029314684 -1 0.0089073181152343 1 Unmodified _RENDIKSYF_ ENSG00000168496|ENST00000305885|FEN1;ENST00000401028.2_1_1:91793937-91794252:+|nuORF 43.77239144664712 0.0547478964384323 2 {M(Oxidation (M))|F}W{I|L}KSY{M(Oxidation (M))|F} 7 4 64.593 0.0 0.0 5.5181 0.0 0.0 181.07486159492345 0.0 181.07486159492345 0.0 49.89991092270554 0.0 0.0 0 1.1307196863200843 0.0 0.8807196863200843 0.4247425010840047 {M(Oxidation (M))|F}W{I|L}KSY{M(Oxidation (M))|F} 5.5181 - 218 1 1.941 50951.9 1.0 3665 3449 7115 DOHH2_400M_050219_2,7116 DOHH2_400M_050219_2,7116,RENDIKSYF True True RENDIKSYF 38.570352 586.290881335735 7295370.5 7115.0 ENSG00000168496|ENST00000305885|FEN1;;ENST00000401028.2_1_1:91793937-91794252:+|nuORF 5.958487192789714 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7117 38.572 69.0 944810.0 25 0 111170.0 + 36801 TEIDDTKVF 9 87 534.2661585111764 1066.5177640891527 2 534.2664672732353 MULTI CID FTMS 0 0 0 7115 702743.3125 0.376773691429463 -1 0.0089073181152343 2 Unmodified _TEIDDTKVF_ ENSG00000100592|ENST00000360909|DAAM1;nc|ENSG00000100592|Q9Y4D1-3|DAAM1;nc|ENSG00000100592|Q9Y4D1|DAAM1 36.506200033944 0.094635877243972 2 {[ET]|[MV]}{I|L}DDTKV{M(Oxidation (M))|F} 9 0 + 48.082 0.0 0.0 4.5083 4.5083 70.301 0.0 0.0 0.0 0.3788076689123585 0.3788076689123585 0.3788076689123585 0.3788076689123585 0 1.0 0.0 0.0 0.0 + + {[ET]|[MV]}{I|L}DDTKV{M(Oxidation (M))|F};[KT]VDD{I|L}{[ET]|[MV]}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}DTKV{[ET]|[MV]}{M(Oxidation (M))|F};[KT]DDV{I|L}{[ET]|[MV]}{M(Oxidation (M))|F};{[ET]|[MV]}[QT]V{I|L}{[ET]|[MV]}{M(Oxidation (M))|F};[KT]DVD{I|L}{[ET]|[MV]}{M(Oxidation (M))|F};[KT]VDEV{[ET]|[MV]}{M(Oxidation (M))|F};{[ET]|[MV]}[DV]KV{[ET]|[MV]}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}KDD{I|L}{[ET]|[MV]}{M(Oxidation (M))|F};[KT]DD{I|L}V{[ET]|[MV]}{M(Oxidation (M))|F} 4.5083;4.4728;4.1387;4.0469;4.0407;3.9351;3.879;3.6131;3.591;3.4531 +;-;-;-;-;-;-;-;-;- + 547 + 1 1.941 53606.6 1.0 3666 3449 7115 DOHH2_400M_050219_2,7117 DOHH2_400M_050219_2,7117,TEIDDTKVF True True TEIDDTKVF 38.571996 534.266467273235 19708972.0 7115.0 nc|ENSG00000100592|Q9Y4D1-3|DAAM1;;nc|ENSG00000100592|Q9Y4D1|DAAM1;;ENSG00000100592|ENST00000360909|DAAM1 5.690115769704183 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7118 38.574 115.0 610780.0 25 0 68125.0 + 6991 EEIPVHEEF 9 84 564.7640002229741 1127.513447512748 2 564.7644531130791 MULTI CID FTMS 0 0 0 7115 478077.25 1.0 0 0.0 3 Unmodified _EEIPVHEEF_ ENSG00000118961|ENST00000237822|LDAH;nc|ENSG00000118961|Q9H6V9-2|LDAH;nc|ENSG00000118961|Q9H6V9-3|LDAH 34.10243960390752 0.1078313939113124 2 EEH[{I|L}T]{M(Oxidation (M))|F}{I|L}[HC] 9 7 + 50.652 0.0 0.0 4.4924 4.4924 84.981 0.0 0.0 0.0 7.949171771974761 28.212112250009653 7.949171771974761 19.31749681984065 0 0.0 1.6989700043360187 1.6549471895720984 0.0 EEH[{I|L}T]{M(Oxidation (M))|F}{I|L}[HC];{[YC]|[HE]}E[{I|L}T]{M(Oxidation (M))|F}{I|L}[HC];[DP]{I|L}H{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[HC];EE{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}T]VP;[{M(Oxidation (M))|F}E]{[{M(Oxidation (M))|F}H]|[RQ]}VP{I|L}[HC];[HV]PE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[HC];{[YC]|[HE]}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{I|L}[HC];{[YC]|[HE]}VP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[HC];[VP]HE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[HC];[VP]EH{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[HC] 4.4924;2.7791;2.5229;2.3659;2.2751;2.1818;2.1365;2.1365;2.1224;1.8554 -;-;-;-;-;-;-;-;-;- 291 1 1.941 56351.3 1.0 3667 3449 7115 DOHH2_400M_050219_2,7118 DOHH2_400M_050219_2,7118,EEIPVHEEF True True EEIPVHEEF 38.574408 564.764453113079 3078629.5 7115.0 ENSG00000118961|ENST00000237822|LDAH;;nc|ENSG00000118961|Q9H6V9-2|LDAH;;nc|ENSG00000118961|Q9H6V9-3|LDAH 7.415396054585774 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7119 38.577 141.0 483960.0 25 0 69999.0 + 13013 HASDRIIAL 9 72 498.2857530946353 994.5569532560706 2 498.2856323122978 MULTI CID FTMS 0 0 0 7115 370467.53125 0.9970620425263708 1 -0.109344482421875 4 Unmodified _HASDRIIAL_ ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT 29.43715596616401 0.1566398223704148 2 HA{I|L} 3 6 45.406 0.0 0.0 4.5655 0.0 0.0 0.0 670.3563326471311 670.3563326471311 12.07350762871934 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.0 0.0 HA{I|L} 4.5655 - 22 + 1 1.941 60132.6 1.0 3668 3449 7115 DOHH2_400M_050219_2,7119 DOHH2_400M_050219_2,7119,HASDRIIAL False True HASDRIIAL 38.577231 498.285632312298 2013457.875 7115.0 ENST00000461139.5_1_3:53259774-53265639:-|nuORF;;nc|ENSG00000163931|P29401-2|TKT;;ENSG00000163931|ENST00000462138|TKT;;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;;ENST00000460343.5_1_3:53261754-53265639:-|nuORF 6.1696445147196455 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7120 38.58 108.0 471550.0 25 0 26476.0 + 25470 NEKAPVDFGY 10 83 570.269715360883 1138.5248777885658 2 570.2703735232353 MULTI CID FTMS 0 0 0 7115 282057.125 0.9157722092436316 -1 0.0089073181152343 5 Unmodified _NEKAPVDFGY_ ENSG00000184640|ENST00000427177|SEPTIN9;ENST00000592481.5_1_17:75447336-75492345:+|nuORF;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;nc|ENSG00000184640|Q9UHD8-3|SEPTIN9;nc|ENSG00000184640|Q9UHD8-4|SEPTIN9;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9;nc|ENSG00000184640|Q9UHD8-8|SEPTIN9;nc|ENSG00000184640|Q9UHD8-9|SEPTIN9 10.799506525563784 0.666336781075408 2 {I|L}GY 3 8 20.177 0.0 0.0 1.7722 0.0 0.0 787.3450815012596 0.0 787.3450815012596 0.0 2.1842903735120345 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}GY 1.7722 - 64 + 1 1.941 43570.4 1.0 3669 3449 7115 DOHH2_400M_050219_2,7120 DOHH2_400M_050219_2,7120,NEKAPVDFGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7121 38.587 410.0 355720.0 25 0 26995.0 + 18055 KTDLDLDGY 9 142 520.2509928757277 1038.4874328182552 2 520.2514526247978 MULTI CID FTMS 0 0 0 7115 222448.078125 0.2749947228866474 -1 0.0089073181152343 6 Unmodified _KTDLDLDGY_ ENSG00000127527|ENST00000455140|EPS15L1;nc|ENSG00000127527|Q9UBC2-3|EPS15L1;nc|ENSG00000127527|Q9UBC2-4|EPS15L1;nc|ENSG00000127527|Q9UBC2|EPS15L1 53.40400417844725 0.0329064971918313 2 {NN|[MP]|[D{I|L}]|[EV]}DTK{I|L}DGY 9 4 + 77.532 0.0 0.0 7.4659 7.4659 87.821 0.0 0.0 0.0 11.72242688480749 16.478174818886373 11.72242688480749 6.465912507003608 0 1.25 1.154901959985743 1.1421590589602533 0.0 {NN|[MP]|[D{I|L}]|[EV]}DTK{I|L}DGY;{NN|[MP]|[D{I|L}]|[EV]}[KT]D{I|L}DGY;[KT]D{I|L}D{I|L}DGY;{NN|[MP]|[D{I|L}]|[EV]}DTKD{I|L}GY;{NN|[MP]|[D{I|L}]|[EV]}DT{I|L}KDGY;{[ES]|[DT]|[{I|L}C]}K{I|L}D{I|L}DGY;{NN|[MP]|[D{I|L}]|[EV]}D{I|L}TKDGY;{[TV]|[{I|L}S]}[SG]{I|L}D{I|L}DGY;{NN|[MP]|[D{I|L}]|[EV]}[KT]DD{I|L}GY;[KT]DD{I|L}{I|L}DGY 7.4659;6.8432;6.3371;6.2788;6.0601;5.9736;5.9398;5.6956;5.6562;5.3601 -;-;+;-;-;-;-;-;-;- + 675 1 1.941 114051.8 1.0 3670 3449 7115 DOHH2_400M_050219_2,7121 DOHH2_400M_050219_2,7121,KTDLDLDGY True True KTDLDLDGY 38.586858 520.251452624798 3784309.75 7115.0 ENSG00000127527|ENST00000455140|EPS15L1;;nc|ENSG00000127527|Q9UBC2-4|EPS15L1;;nc|ENSG00000127527|Q9UBC2-3|EPS15L1;;nc|ENSG00000127527|Q9UBC2|EPS15L1 5.545153220494588 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7122 38.59 167.0 449660.0 25 0 55178.0 + 33349 SGGKKSVG 8 120 360.2060064383613 718.3974599435227 2 360.2057678103447 MULTI CID FTMS 0 0 0 7115 226754.421875 0.1172789799824072 -3 0.2082672119140625 7 Unmodified _SGGKKSVG_ REV__ENST00000240185.7_1_1:11083899-11083992:+|nuORF 2.577480529830294 0.808687252328423 2 {I|L} 1 -1 10.0 0.0 0.0 1.392 0.0 0.0 587.3023499355133 0.0 587.3023499355133 0.0 8.217263382430938 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.392 - 8 + 1 1.941 65587.6 1.0 3671 3449 7115 DOHH2_400M_050219_2,7122 DOHH2_400M_050219_2,7122,SGGKKSVG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7123 38.604 800.0 203400.0 25 0 16003.0 32301 RWWFRRLFLIF 11 97 820.4722754848907 1638.9299980365813 2 820.9752075076103 MULTI CID FTMS 0 0 0 7115 176017.1875 1.0 0 0.0 8 Unmodified _RWWFRRLFLIF_ ENST00000281830.3_1_2:223918801-223918864:+|nuORF 0.3070304955306653 0.8736993455979228 2 KVPQVSTP[{I|L}T]VEVSR 15 14 + 76.961 0.0 0.0 4.6958 4.6958 80.655 0.0 0.0 0.0 28.71701101314291 9.075674083184085 9.075674083184085 9.030899869919438 0 0.555462187404089 0.0 0.0 0.9247425010840048 KVPQVSTP[{I|L}T]VEVSR;KVP[AG]VSTP[{I|L}T]VEVSR;KVN[{I|L}P]STP[{I|L}T]VEVSR;KVPQV{[RE]|[WV]}[{I|L}T]VEVSR;KV{I|L}[NP]STP[{I|L}T]VEVSR;[QP]VVK[HN]PTSV[HA]{I|L}{I|L};[QP]VVK[HN]PTS[{I|L}P]P{I|L}{I|L} 4.6958;4.1448;3.614;3.3272;3.3229;2.2558;2.2558 -;-;-;-;-;-;- 695 + 1 1.941 113319.2 0.6899999976158142 3672 3449 7115 DOHH2_400M_050219_2,7123 DOHH2_400M_050219_2,7123,RWWFRRLFLIF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7124 38.612 423.0 166170.0 25 0 15059.0 + 32830 SEGISPNNSAW 11 116 581.2619050731615 1160.509257213123 2 581.2623168826103 MULTI CID FTMS 0 0 0 7115 165183.03125 0.8418793593739535 1 -0.109344482421875 9 Unmodified _SEGISPNNSAW_ ENSG00000116497|ENST00000373475|S100PBP;ENST00000356689.7_1_1:33290993-33299636:+|nuORF;ENST00000531123.5_1_1:33290993-33299636:+|nuORF;nc|ENSG00000116497|Q96BU1-2|S100PBP 16.149105407346934 0.6992268271266642 2 [NP]NSAP 6 6 21.177 0.0 0.0 1.8248 0.0 0.0 0.0 577.2291418168917 577.2291418168917 -1.1674614436431625 0.0 -1.1674614436431625 0.0 0 0.0 0.619788758288394 0.6307196863200843 0.5774509799928715 [NP]NSAP 1.8248 - 619 1 1.941 58622.4 1.0 3673 3449 7115 DOHH2_400M_050219_2,7124 DOHH2_400M_050219_2,7124,SEGISPNNSAW False True SEGISPNNSAW 38.611523 581.26231688261 1204073.375 7115.0 ENST00000356689.7_1_1:33290993-33299636:+|nuORF;;ENST00000531123.5_1_1:33290993-33299636:+|nuORF;;ENSG00000116497|ENST00000373475|S100PBP;;nc|ENSG00000116497|Q96BU1-2|S100PBP 5.195514837900798 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7125 38.622 593.0 241760.0 25 0 26376.0 + 14597 IIDNSQGFY 9 134 528.7514238112082 1055.4882946892162 2 528.7534667849541 MULTI CID FTMS 0 0 0 7115 154412.421875 0.83620157964874 -1 0.0089073181152343 10 Unmodified _IIDNSQGFY_ ENSG00000135069|ENST00000376588|PSAT1;nc|ENSG00000135069|Q9Y617-2|PSAT1 58.6788170122104 0.0268135626297836 2 [DN]SQG{I|L}{I|L}[Y{M(Oxidation (M))|F}] 9 4 + 44.172 0.0 0.0 4.185 4.185 77.415 0.0 0.0 0.0 7.204999916446795 4.762036441594191 4.762036441594191 7.204999916446795 0 0.5 0.7695510786217261 1.5807808920067157 1.5044321917401078 [DN]SQG{I|L}{I|L}[Y{M(Oxidation (M))|F}];[NS]DQG{I|L}{I|L}[Y{M(Oxidation (M))|F}];[DN]S[AG]G{I|L}{I|L}[Y{M(Oxidation (M))|F}];{I|L}{I|L}DNSQG[Y{M(Oxidation (M))|F}];[RD]DD{I|L}{I|L}[Y{M(Oxidation (M))|F}];[NS]NEG{I|L}{I|L}[Y{M(Oxidation (M))|F}];[VG]DG{I|L}TQ{[ET]|[MV]}H;[VG]DG{I|L}TQG[Y{M(Oxidation (M))|F}];[NS]NAD{I|L}{I|L}[Y{M(Oxidation (M))|F}];[VG]DA{I|L}SQG[Y{M(Oxidation (M))|F}] 4.185;3.5024;3.3126;3.1445;3.035;2.9678;2.9051;2.8554;2.7689;2.6341 -;-;-;+;-;-;-;-;-;- + 1509 1 1.941 112521.8 1.0 3674 3449 7115 DOHH2_400M_050219_2,7125 DOHH2_400M_050219_2,7125,IIDNSQGFY True True IIDNSQGFY 38.621906 528.753466784954 1514099.75 7115.0 ENSG00000135069|ENST00000376588|PSAT1;;nc|ENSG00000135069|Q9Y617-2|PSAT1 4.281167984008789 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7126 38.627 295.0 239790.0 25 0 16928.0 + 20969 LNLKQMLY 8 118 511.79045875931735 1021.5663645854348 2 511.7905151247978 MULTI CID FTMS 0 0 0 7115 147345.203125 1.0 0 0.0 11 Unmodified _LNLKQMLY_ REV__ENSG00000139318|ENST00000279488|DUSP6;REV__nc|ENSG00000139318|Q16828-2|DUSP6 20.871210003555333 0.6025813472596342 2 HG 2 -1 24.883 0.0 0.0 2.4357 0.0 0.0 0.0 824.4645932739477 824.4645932739477 2.317897329958484 0.0 0.0 0.0 0 0.5418727718234408 0.0 0.0 0.0 HG 2.4357 - 167 + 1 1.941 65726.3 1.0 3675 3449 7115 DOHH2_400M_050219_2,7126 DOHH2_400M_050219_2,7126,LNLKQMLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7127 38.636 421.0 145880.0 25 0 17804.0 -1 0 110 547.3209409467048 546.3136644801048 1 550.3347045779228 MULTI CID FTMS 0 0 0 7115 135396.453125 0.975054641217842 1 -0.109344482421875 12 2 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 3 -1 24.169 0.0 0.0 4.424 0.0 0.0 0.0 154.1198833123891 154.1198833123891 9.47621246364342 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 4.424 - 52 1 1.941 51063.6 1.0 3676 3449 7115 DOHH2_400M_050219_2,7127 DOHH2_400M_050219_2,7127, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7128 38.65 800.0 93266.0 25 0 5736.7 -1 0 99 765.0448813648306 2292.112814694692 3 765.3788329958916 MULTI CID FTMS 0 0 0 7115 123947.921875 1.0 0 0.0 13 2 [DN]{I|L}Q{I|L}N[SG]AEAW 12 -1 49.607 0.0 0.0 2.1643 0.0 0.0 0.0 990.4908683195292 990.4908683195292 28.637984666052887 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 [DN]{I|L}Q{I|L}N[SG]AEAW 2.1643 - 1472 1 1.941 60851.3 0.5600000023841858 3677 3449 7115 DOHH2_400M_050219_2,7128 DOHH2_400M_050219_2,7128, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7129 38.658 450.0 302850.0 25 0 34889.0 + + -1 VVDPDEKSIMTY 12 129 706.83436434246 1411.65417575172 2 706.8354980349541 MULTI CID FTMS 0 0 0 7115 123093.8125 0.4173467398444618 -1 0.0089073181152343 14 2 Oxidation (M) _M(Oxidation (M))HMVLLEM(Oxidation (M))LTY_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 17.11289562659939 0.6791789249425932 2 VVDP{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}HHTY 12 -1 + 99.541 0.0 0.0 7.0513 7.0513 83.582 0.0 0.0 0.0 62.90221594415691 8.257108030787322 8.257108030787322 3.433181346311472 0 1.274227503252014 2.0 1.8996498648046136 0.0 VVDP{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}HHTY;VVDP{[C(Carbamidomethyl (C))G]|[NC]}{I|L}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TY;VVDPD[KS]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TY;VVD[WQ]D{I|L}HHTY;VVD[WQ]{I|L}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TY;VVD[QA]D{I|L}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TY;VVD[WQ]{I|L}DHHTY;VVDY{[YC]|[HE]}{I|L}HHTY;VVDP{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}Y;VVDPD[KS]D{[{M(Oxidation (M))|F}D]|MM}{I|L}Y 7.0513;6.8081;6.8081;6.6481;6.3485;6.2656;6.2035;6.1633;6.1487;5.7605 -;-;-;-;-;-;-;-;-;- 7750 + 1 1.941 99700.0 1.0 3678 3449 7115 DOHH2_400M_050219_2,7129 DOHH2_400M_050219_2,7129,MHMVLLEMLTY False False VVDPDEKSIMTY 38.657839 706.835498034954 1474438.25 7115.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 7.991182327270508 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7130 38.661 141.0 476640.0 25 0 85577.0 13580 HPLLGGPH 8 97 414.2300844730385 826.445616012877 2 414.2305786013603 MULTI CID FTMS 0 0 0 7115 124314.296875 0.9091261762278368 1 -0.109344482421875 15 Unmodified _HPLLGGPH_ ENSG00000213023|ENST00000600079|SYT3 11.114462752807354 0.7467182956244686 2 E{I|L} 2 7 17.959 0.0 0.0 2.173 0.0 0.0 0.0 581.2945040338499 581.2945040338499 5.194998528595392 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L} 2.173 - 75 + 1 1.941 57301.9 1.0 3679 3449 7115 DOHH2_400M_050219_2,7130 DOHH2_400M_050219_2,7130,HPLLGGPH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7131 38.67 460.0 225560.0 25 0 19750.0 -1 0 92 604.2972513338495 603.2899748672495 1 604.3012573122978 MULTI CID FTMS 0 0 0 7115 116993.7734375 0.568345731388609 -1 0.0089073181152343 16 2 {I|L}Q 2 -1 25.445 0.0 0.0 4.2178 0.0 0.0 344.1361490389276 0.0 344.1361490389276 0.0 9.233745164289113 0.0 0.0 0 0.0 0.0 0.0 0.6861818737241735 {I|L}Q 4.2178 - 55 + 1 1.941 84443.6 1.0 3680 3449 7115 DOHH2_400M_050219_2,7131 DOHH2_400M_050219_2,7131, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7132 38.675 263.0 498010.0 25 0 58029.0 + 25149 MQSNEKSYSL 10 121 593.7719521842182 1185.5293514352363 2 593.7718383669853 MULTI CID FTMS 0 0 0 7115 94596.0859375 0.1938540839282282 -1 0.0089073181152343 17 Unmodified _MQSNEKSYSL_ REV__ENSG00000108582|ENST00000225719|CPD;REV__nc|ENSG00000108582|O75976-2|CPD 21.53697664764585 0.484802182336468 2 S{[SA]|[TG]}D{I|L} 5 -1 26.356 0.0 0.0 2.2232 0.0 0.0 694.2928333966812 0.0 694.2928333966812 0.0 2.3150821687341505 0.0 0.0 0 0.555462187404089 0.0 1.305462187404089 0.0 S{[SA]|[TG]}D{I|L} 2.2232 - 115 1 1.941 100239.6 1.0 3681 3449 7115 DOHH2_400M_050219_2,7132 DOHH2_400M_050219_2,7132,MQSNEKSYSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7134 38.68 5.8 10553000.0 25 0 1151000.0 -1 IVEGMPLLY 9 70 525.7822224639784 1049.5498919947568 2 525.7830688357353 MULTI CID FTMS 0 0 0 7133 9707375.0 0.8368485159249819 1 -0.1210060119628906 1 Oxidation (M) _IVEGM(Oxidation (M))PLLY_ ENSG00000163817|ENST00000358525|SLC6A20;nc|ENSG00000163817|Q9NP91-2|SLC6A20 23.1484247019978 0.2366544122328345 2 QS{I|L}V{I|L}Y 6 -1 44.87 0.0 0.0 4.2752 0.0 0.0 328.1612721173844 0.0 328.1612721173844 0.0 23.65524322918041 0.0 0.0 0 1.0 0.0 0.0 0.0 QS{I|L}V{I|L}Y 4.2752 - 89 1 1.941 51895.8 1.0 3682 3450 7133 DOHH2_400M_050219_2,7134 DOHH2_400M_050219_2,7134,IVEGMPLLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7135 38.694 800.0 197410.0 25 0 12798.0 + -1 QEHDITNFY 9 177 583.7966821252453 1165.5788113172905 2 583.7975952029228 MULTI CID FTMS 0 0 0 7133 41744.39453125 0.0457092459500652 7 -0.5859184265136719 2 Oxidation (M) _M(Oxidation (M))IEPRTLQY_ ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1 38.17557092003332 0.0854718145212029 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EC{I|L} 5 -1 43.952 0.0 0.0 3.7709 0.0 0.0 0.0 557.3087190655875 557.3087190655875 19.92870292316539 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EC{I|L} 3.7709 - 2679 1 1.941 119843.8 0.550000011920929 3683 3450 7133 DOHH2_400M_050219_2,7135 DOHH2_400M_050219_2,7135,MIEPRTLQY False False QEHDITNFY 38.693528 583.797595202923 721777.6875 7133.0 ENSG00000165671|ENST00000439151|NSD1;;nc|ENSG00000165671|Q96L73-2|NSD1;;nc|ENSG00000165671|Q96L73-3|NSD1 4.751876672108968 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7136 38.695 61.0 1203100.0 25 0 167720.0 + 9746 FMKPGKVVL 9 83 509.8092540288391 1017.603955124478 2 509.8096801638603 MULTI CID FTMS 0 0 0 7133 942071.25 0.7588396471380588 -2 0.1182518005371093 3 Unmodified _FMKPGKVVL_ ENSG00000131469|ENST00000253788|RPL27;ENST00000587478.1_1_17:41150475-41150953:+|nuORF;ENST00000593262.1_1_17:41150683-41150953:+|nuORF 34.10243960390752 0.1078313939113124 2 {[YD]|[{M(Oxidation (M))|F}M]}KP[RK]V{I|L} 8 2 + 18.795 0.0 0.0 1.847 1.847 78.692 0.0 0.0 0.0 1.845012469977771 1.013422047481647 1.013422047481647 18.79547504202166 0 0.8494850021680094 0.0 0.0 0.0 {[YD]|[{M(Oxidation (M))|F}M]}KP[RK]V{I|L} 1.847 - 122 + 1 1.941 61613.2 1.0 3684 3450 7133 DOHH2_400M_050219_2,7136 DOHH2_400M_050219_2,7136,FMKPGKVVL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7137 38.698 129.0 776550.0 25 0 138360.0 + 27481 PKGPGPLA 8 122 368.7202646534795 735.425976373759 2 368.7199584841728 MULTI CID FTMS 0 0 0 7133 473602.0625 0.6034810229156299 -2 0.1182518005371093 4 Unmodified _PKGPGPLA_ REV__ENST00000519574.1_1_2:219125758-219128073:+|nuORF;REV__ENST00000566665.1_1_16:10273773-10274277:-|nuORF 0.6903765706972694 0.8201419426409876 2 {I|L} 1 -1 9.6041 0.0 0.0 1.3059 0.0 0.0 604.3311562827419 0.0 604.3311562827419 0.0 3.661968799114844 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3059 + + 6 + 1 1.941 83648.6 1.0 3685 3450 7133 DOHH2_400M_050219_2,7137 DOHH2_400M_050219_2,7137,PKGPGPLA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7138 38.7 119.0 550800.0 25 0 91599.0 + 37070 TGIARVPL 8 97 413.7608216832372 825.5070904332745 2 413.7615539431572 MULTI CID FTMS 0 0 0 7133 338039.53125 0.4605906776380252 -2 0.1182518005371093 5 Unmodified _TGIARVPL_ ENSG00000125835|ENST00000381342|SNRPB;ENSG00000128739|ENST00000390687|SNRPN;nc|ENSG00000125835|P14678-3|SNRPB;nc|ENSG00000125835|P14678|SNRPB;nc|ENSG00000128739|P63162-2|SNRPN 30.63653989081413 0.3996269429323407 2 {[SA]|[TG]}{I|L}ARVP{I|L} 8 0 + 40.581 0.0 0.0 4.9159 4.9159 85.936 0.0 0.0 0.0 22.164797616105457 3.965852269705678 3.965852269705678 15.115999703580163 0 1.4731975075880328 1.154901959985743 0.0 0.0 + + {[SA]|[TG]}{I|L}ARVP{I|L};{[SA]|[TG]}{I|L}[{I|L}V]A[RP];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[{I|L}T][RP] 4.9159;3.0848;0.0094622 +;-;- + 110 + 1 1.941 58580.5 1.0 3686 3450 7133 DOHH2_400M_050219_2,7138 DOHH2_400M_050219_2,7138,TGIARVPL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7139 38.706 311.0 333430.0 25 0 29590.0 + 16726 KEWVTPKEF 9 117 582.308070290261 1162.6015876473218 2 582.3087036013603 MULTI CID FTMS 0 0 0 7133 300500.34375 0.935355856487239 -2 0.1182518005371093 6 Unmodified _KEWVTPKEF_ ENSG00000143799|ENST00000366794|PARP1 112.04118876639724 0.0046099663446653 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVTPKE{M(Oxidation (M))|F} 9 0 + 92.015 0.0 0.0 7.9146 7.9146 84.382 0.0 0.0 0.0 2.8725420524135927 61.77637002803293 2.8725420524135927 2.943839129248204 0 2.9604093769761874 0.0 1.9476212463643423 0.6382104921644451 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVTPKE{M(Oxidation (M))|F};{[RE]|[WV]}TGVTPKE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVTPEK{M(Oxidation (M))|F};KEWVTPKE{M(Oxidation (M))|F};{[RE]|[WV]}TGVTPEK{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WTVPKE{M(Oxidation (M))|F};{[TV]|[{I|L}S]}GWVTPKE{M(Oxidation (M))|F};{[RE]|[WV]}TGTVPKE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WTVPEK{M(Oxidation (M))|F};{[RE]|[WV]}TRTPKE{M(Oxidation (M))|F} 7.9146;7.6614;7.637;7.483;7.3838;7.1483;6.9992;6.8951;6.8707;6.7534 +;-;-;+;-;-;-;-;-;- + 2563 1 1.941 81093.8 1.0 3687 3450 7133 DOHH2_400M_050219_2,7139 DOHH2_400M_050219_2,7139,KEWVTPKEF True True KEWVTPKEF 38.705803 582.30870360136 7569676.5 7133.0 ENSG00000143799|ENST00000366794|PARP1 8.513373215993246 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7140 38.71 199.0 346620.0 25 0 51378.0 + + -1 ETDLSIPTSPTSKY 14 76 769.8831585343494 1537.751764135499 2 769.8831054568291 MULTI CID FTMS 0 0 0 7133 259941.046875 0.8827769781103375 -2 0.1182518005371093 7 Carbamidomethyl (C) _RTQC(Carbamidomethyl (C))LREVWYQ_ nc|ENSG00000185480|Q9NWS1-2|PARPBP;nc|ENSG00000185480|Q9NWS1-7|PARPBP;ENST00000541668.5_1_12:102514215-102548625:+|nuORF;nc|ENSG00000185480|Q9NWS1-3|PARPBP;nc|ENSG00000185480|Q9NWS1-6|PARPBP;ENSG00000185480|ENST00000327680|PARPBP 7.101721422024254 0.8416415510090076 2 [DP]D{I|L}[Q{I|L}][TP]{I|L}S{I|L}D[DP] 14 -1 + 71.075 0.0 0.0 4.622 4.622 76.881 0.0 0.0 0.0 11.165827977365623 7.569619513137056 7.569619513137056 5.255762612236907 0 1.4436726795685342 1.2218487496163564 1.274227503252014 0.3807196863200844 [DP]D{I|L}[Q{I|L}][TP]{I|L}S{I|L}D[DP];[DP]VE[Q{I|L}][TP]{I|L}S{I|L}D[DP];[DP]VS[VP]{[RE]|[WV]}{I|L}S{I|L}D[DP];[DP]VS[VP]S[TP]{I|L}S{I|L}D[DP];[DP]VT{[SA]|[TG]}K{I|L}[HM]{I|L}D[DP];{NN|[MP]|[D{I|L}]|[EV]}T[HK]S[TP]{I|L}S{I|L}D[DP];{NN|[MP]|[D{I|L}]|[EV]}T[HK]{[RE]|[WV]}{I|L}S{I|L}D[DP];{[TV]|[{I|L}S]}E[HK]S[TP]{I|L}S{I|L}D[DP];{NN|[MP]|[D{I|L}]|[EV]}GK[HM][TP]{I|L}S{I|L}D[DP];{[ET]|[MV]}V[HK]S[TP]{I|L}S{I|L}D[DP] 4.622;4.2802;4.2802;4.2719;3.9025;3.8959;3.658;3.4571;3.401;3.3431 -;-;-;-;-;-;-;-;-;- 675 1 1.941 53393.2 1.0 3688 3450 7133 DOHH2_400M_050219_2,7140 DOHH2_400M_050219_2,7140,RTQCLREVWYQ False False ETDLSIPTSPTSKY 38.709634 769.883105456829 7209262.0 7133.0 nc|ENSG00000185480|Q9NWS1-2|PARPBP;;nc|ENSG00000185480|Q9NWS1-7|PARPBP;;ENST00000541668.5_1_12:102514215-102548625:+|nuORF;;nc|ENSG00000185480|Q9NWS1-3|PARPBP;;nc|ENSG00000185480|Q9NWS1-6|PARPBP;;ENSG00000185480|ENST00000327680|PARPBP 7.74392573038737 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7141 38.714 239.0 320220.0 25 0 38118.0 + 29050 QEIDGKSLL 9 106 501.7770731186185 0 501.7771789431572 PEAK CID FTMS 0 0 0 7133 199866.71875 0.6420235259774827 -1 0.109344482421875 8 Unmodified _QEIDGKSLL_ ENSG00000141858|ENST00000533683|SAMD1;ENSG00000203943|ENST00000394834|SAMD13;ENST00000506295.1_2_1:84810518-84815454:+|nuORF;nc|ENSG00000141858|Q6SPF0|SAMD1;nc|ENSG00000203943|Q5VXD3-2|SAMD13;nc|ENSG00000203943|Q5VXD3-3|SAMD13;nc|ENSG00000203943|Q5VXD3|SAMD13 36.12702656103203 0.0807574182900477 2 {I|L}{I|L}SDG 5 7 15.609 0.0 0.0 1.5585 0.0 0.0 388.195551411262 125.07242761783438 513.2679790290964 0.0 0.0 0.0 0.0 0 0.5 0.0 0.5994850021680094 0.0 {I|L}{I|L}SDG 1.5585 - 254 + 1 1.941 66621.4 1.0 3689 3450 7133 DOHH2_400M_050219_2,7141 DOHH2_400M_050219_2,7141,QEIDGKSLL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7142 38.719 266.0 236170.0 25 0 19981.0 43317 WLDRLGESKY 10 93 422.8876025944763 1265.6409783836289 3 422.8872558474541 MULTI CID FTMS 0 0 0 7133 186295.21875 1.0 0 0.0 9 Unmodified _WLDRLGESKY_ ENSG00000111142|ENST00000323666|METAP2;nc|ENSG00000111142|P50579-2|METAP2;nc|ENSG00000111142|P50579-3|METAP2 10.315234532428624 0.6744623947628824 2 W{I|L}N 3 8 39.922 0.0 0.0 3.1543 0.0 0.0 0.0 849.3900850885374 849.3900850885374 21.421590589602527 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 W{I|L}N 3.1543 - 214 + 1 1.941 55875.9 1.0 3690 3450 7133 DOHH2_400M_050219_2,7142 DOHH2_400M_050219_2,7142,WLDRLGESKY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7143 38.733 800.0 207590.0 25 0 11570.0 25282 MYKPGKVVL 9 162 517.8073295440335 1033.6001061548668 2 517.8074218630791 MULTI CID FTMS 0 0 0 7133 144360.921875 1.0 0 0.0 10 Unmodified _MYKPGKVVL_ ENST00000427953.5_1_1:114466911-114471053:-|nuORF 32.30548876998284 0.1201446275138228 2 [VG][KP]KMYV{I|L} 9 5 + 42.303 0.0 0.0 4.0927 4.0927 69.284 0.0 0.0 0.0 0.627908298594555 13.0648859461192 0.627908298594555 0.627908298594555 0 0.7742275032520141 1.5228787452803376 0.0 0.0 [VG][KP]KMYV{I|L};[KP]GVKMYV{I|L};[VG][KP]VKMY{I|L};[KG]PVKMYV{I|L};[PG]KVKMYV{I|L};[KP]GVVKMY{I|L};[VG][KP]KVMY{I|L};[KP]GVKVMY{I|L};[VG][KP]KMVY{I|L};[KG]PVVKMY{I|L} 4.0927;4.032;3.7313;3.7096;3.7096;3.6705;3.5609;3.5002;3.3906;3.3482 -;-;-;-;-;-;-;-;-;- 1030 1 1.941 126400.0 0.6299999952316284 3691 3450 7133 DOHH2_400M_050219_2,7143 DOHH2_400M_050219_2,7143,MYKPGKVVL True True FMKPGKVVL 38.732837 517.807421863079 1056474.875 7133.0 ENSG00000131469|ENST00000253788|RPL27;;ENST00000593262.1_1_17:41150683-41150953:+|nuORF;;ENST00000587478.1_1_17:41150475-41150953:+|nuORF 4.498509645462036 2.0 False 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7144 38.739 331.0 391530.0 25 0 37612.0 + 31697 RRNDKIIVF 9 137 387.5673120358209 1159.6801067076628 3 387.5677673220634 MULTI CID FTMS 0 0 0 7133 142853.3125 0.628417340435674 -2 0.1182518005371093 11 Unmodified _RRNDKIIVF_ ENSG00000163161|ENST00000285398|ERCC3;ENST00000426778.5_1_2:128015174-128051559:-|nuORF 10.898955630103616 0.5416613042237204 2 [RN][RD]K{I|L}{I|L}V{M(Oxidation (M))|F} 9 2 + 42.087 0.0 0.0 3.6292 3.6292 73.675 0.0 0.0 0.0 3.4016622314967293 29.613037394097432 3.4016622314967293 5.510299956639805 0 0.6747425010840047 0.0 0.4247425010840047 0.0 [RN][RD]K{I|L}{I|L}V{M(Oxidation (M))|F};[RN][RD]K{I|L}V{I|L}{M(Oxidation (M))|F};{[HG]|PP}RRY{I|L}{I|L}V{M(Oxidation (M))|F};{[HG]|PP}RRY{I|L}V{I|L}{M(Oxidation (M))|F} 3.6292;3.1541;2.9075;2.4324 -;-;-;- 92 1 1.941 105351.3 1.0 3692 3450 7133 DOHH2_400M_050219_2,7144 DOHH2_400M_050219_2,7144,RRNDKIIVF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7145 38.751 610.0 335570.0 25 0 50164.0 + 7493 EGYIKKLL 8 140 482.29732389354257 962.5800948538852 2 482.2976867556572 MULTI CID FTMS 0 0 0 7133 128535.2265625 1.0 0 0.0 12 Unmodified _EGYIKKLL_ ENSG00000100796|ENST00000554943|PPP4R3A;ENSG00000275052|ENST00000616407|PPP4R3B;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;nc|ENSG00000100796|Q6IN85-5|PPP4R3A;nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B 78.14939416004806 0.0999748067387998 2 EGY{I|L}KK{I|L}{I|L} 8 0 + 51.353 0.0 0.0 5.335 5.335 90.123 0.0 0.0 0.0 29.92652058786005 12.5190243216651 12.5190243216651 51.35319562354736 0 1.3226825097560422 0.5376020021010439 0.0 0.0 + + EGY{I|L}KK{I|L}{I|L} 5.335 + + 417 + 1 1.941 155389.4 1.0 3693 3450 7133 DOHH2_400M_050219_2,7145 DOHH2_400M_050219_2,7145,EGYIKKLL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7146 38.761 570.0 233890.0 25 0 14755.0 + 44128 YLDKGILKY 9 161 556.8204205781169 1111.6262882230335 2 556.8209106326103 MULTI CID FTMS 0 0 0 7133 125763.921875 1.0 0 0.0 13 Unmodified _YLDKGILKY_ ENSG00000070882|ENST00000313367|OSBPL3;nc|ENSG00000070882|Q9H4L5-2|OSBPL3;nc|ENSG00000070882|Q9H4L5-3|OSBPL3;nc|ENSG00000070882|Q9H4L5-4|OSBPL3;nc|ENSG00000070882|Q9H4L5-5|OSBPL3;nc|ENSG00000070882|Q9H4L5-6|OSBPL3;nc|ENSG00000070882|Q9H4L5-7|OSBPL3;nc|ENSG00000070882|Q9H4L5-8|OSBPL3;OSBPL3|p.R837Kfs*6|1|0.48|ENSG00000070882|chr7:24804369-24804372|TCTC/-|frameshift_variant 27.628801355627647 0.1796483985696185 2 {I|L}YTKSP{I|L}KY 9 5 + 58.807 0.0 0.0 5.2902 5.2902 73.228 0.0 0.0 0.0 1.7609125905568137 12.57007180900061 1.7609125905568137 0.2930316943826483 0 0.9049471895720984 2.0 0.3494850021680094 0.2396518287104437 {I|L}YTKSP{I|L}KY;{I|L}YTK[K{I|L}]PSY;Y{I|L}TKSP{I|L}KY;Y{I|L}TK[K{I|L}]PSY;{I|L}YTKSPK{I|L}Y;Y{I|L}TKSPK{I|L}Y;{I|L}YTKSPKY{I|L};{I|L}YTKSP{I|L}YK;{I|L}Y{I|L}S[WR]K{M(Oxidation (M))|F};Y{I|L}TKSPKY{I|L} 5.2902;5.2638;5.1318;5.1054;4.9718;4.8134;4.1594;4.1007;4.0137;4.001 -;-;-;-;-;-;-;-;-;- 3323 + 1 1.941 103655.1 1.0 3694 3450 7133 DOHH2_400M_050219_2,7146 DOHH2_400M_050219_2,7146,YLDKGILKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7147 38.774 800.0 75123.0 25 0 7093.8 + 904 AEYIQKNVQLY 11 103 684.8630798579151 1367.71160678263 2 684.8628417849541 MULTI CID FTMS 0 0 0 7133 121246.28125 1.0 0 0.0 14 Unmodified _AEYIQKNVQLY_ ENSG00000126067|ENST00000373237|PSMB2 27.22323531849824 0.4529927607131788 2 {[QN]|[E{I|L}]|[KN]}{I|L}VQ[YE]AQ{I|L}Y 11 6 + 48.224 0.0 0.0 3.5259 3.5259 68.872 0.0 0.0 0.0 15.56302500767287 9.797513843253569 9.797513843253569 1.7609125905568137 0 0.7429928190999391 1.0969100130080565 0.2614393726401688 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}VQ[YE]AQ{I|L}Y;{[QN]|[E{I|L}]|[KN]}{I|L}N{I|L}[YE]AQ{I|L}Y;{[QN]|[E{I|L}]|[KN]}{I|L}N[DV]YVQ{I|L}Y;{[QN]|[E{I|L}]|[KN]}V{I|L}Q[YE]AQ{I|L}Y;{[QN]|[E{I|L}]|[KN]}{I|L}VQ[YE]A[AG]{I|L}Y;{[QN]|[E{I|L}]|[KN]}{I|L}V[AG][YE]AQ{I|L}Y;{[QN]|[E{I|L}]|[KN]}{I|L}GG{I|L}[YE]AQ{I|L}Y;{[QN]|[E{I|L}]|[KN]}{I|L}N{I|L}[YE]A[AG]{I|L}Y;{[QN]|[E{I|L}]|[KN]}{I|L}V[DP][HA]AQ{I|L}Y;[{I|L}V]E{I|L}Q[YE]AQ{I|L}Y 3.5259;3.3971;3.0087;2.9569;2.8585;2.8585;2.7297;2.7297;2.6384;2.388 -;-;-;-;-;-;-;-;-;- 663 1 1.941 52666.3 0.550000011920929 3695 3450 7133 DOHH2_400M_050219_2,7147 DOHH2_400M_050219_2,7147,AEYIQKNVQLY False True AEYIQKNVQLY 38.774495 684.862841784954 457769.0625 7133.0 ENSG00000126067|ENST00000373237|PSMB2 4.189983606338501 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7148 38.782 355.0 185020.0 25 0 13013.0 + 582 AEIPQQVVGY 10 94 552.2898457377368 1102.5651385422734 2 552.2902709841728 MULTI CID FTMS 0 0 0 7133 119877.2109375 0.3463353011003075 -3 0.2276229858398437 15 Unmodified _AEIPQQVVGY_ ENSG00000085719|ENST00000517490|CPNE3 22.736283301280096 0.4578556481593033 2 VDT{I|L}VGY 7 7 36.955 0.0 0.0 3.3517 0.0 0.0 337.1641508487172 0.0 337.1641508487172 0.0 11.34720730648759 0.0 0.0 0 0.3182503180159344 0.0 0.3807196863200844 0.0 VDT{I|L}VGY 3.3517 - 706 + 1 1.941 58002.2 1.0 3696 3450 7133 DOHH2_400M_050219_2,7148 DOHH2_400M_050219_2,7148,AEIPQQVVGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7149 38.796 800.0 138170.0 25 0 9088.2 + -1 HCTFELLWVC 10 108 654.2983079637598 1306.5820629943196 2 654.2989990115166 MULTI CID FTMS 0 0 0 7133 93661.890625 0.908848266427819 -3 0.2276229858398437 16 Carbamidomethyl (C) _HCTFELLWVC(Carbamidomethyl (C))_ REV__ENST00000467006.6_1_11:126158385-126159665:+|nuORF 14.838274106304384 0.5985701837916485 2 [HC]PD{M(Oxidation (M))|F}EEKR{M(Oxidation (M))|F} 10 -1 + 72.963 0.0 0.0 5.5843 5.5843 83.209 0.0 0.0 0.0 27.1115578437868 8.951552554016288 8.951552554016288 7.742275032520155 0 1.385151878060192 0.0 0.7742275032520141 0.0 [HC]PD{M(Oxidation (M))|F}EEKR{M(Oxidation (M))|F};{M(Oxidation (M))|F}[CS]D{M(Oxidation (M))|F}EEKR{M(Oxidation (M))|F};[HC]PD{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}[RK];{M(Oxidation (M))|F}[CS]D{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}[RK];[HC]{M(Oxidation (M))|F}[DP]EEKR{M(Oxidation (M))|F};{M(Oxidation (M))|F}[HC][DP]EEKR{M(Oxidation (M))|F};[HC]PD[NS]{[CT]|[{M(Oxidation (M))|F}G]}KR{M(Oxidation (M))|F};[HC]{M(Oxidation (M))|F}[DP]EE{M(Oxidation (M))|F}[RK];{M(Oxidation (M))|F}EE{[HG]|PP}EEKR{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}EE[RK]EEE 5.5843;4.9917;4.8975;4.3049;4.1121;3.5195;3.4683;3.4253;3.1065;2.9527 -;-;-;-;-;-;-;-;-;- 692 + 1 1.941 84943.7 0.5199999809265137 3697 3450 7133 DOHH2_400M_050219_2,7149 DOHH2_400M_050219_2,7149,HCTFELLWVC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7151 38.802 98.0 370760.0 25 0 46108.0 + -1 MHMVLLEMLTY 11 66 698.8368299247848 1395.6591069163694 2 698.8372070193291 MULTI CID FTMS 0 0 0 7150 387344.90625 0.2326983344218213 1 -0.1217918395996093 1 Oxidation (M) _MHMVLLEM(Oxidation (M))LTY_ REV__ENSG00000078618|ENST00000352171|NRDC;REV__nc|ENSG00000078618|O43847-2|NRDC 5.731851221503515 0.8481046878870278 2 VVD[QA]VD{I|L}SKE 11 -1 48.964 0.0 0.0 3.5083 0.0 0.0 0.0 209.0580080621704 209.0580080621704 27.197921159242675 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3494850021680094 0.0 VVD[QA]VD{I|L}SKE 3.5083 - 398 + 1 1.946 35247.7 1.0 3698 3451 7150 DOHH2_400M_050219_2,7151 DOHH2_400M_050219_2,7151,MHMVLLEMLTY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7152 38.805 130.0 330220.0 25 0 40756.0 + 1072 AGHPHIITL 9 73 479.7772605044344 957.5399680756688 2 479.7772094607353 MULTI CID FTMS 0 0 0 7150 204860.109375 0.227458336811728 1 -0.1217918395996093 2 Unmodified _AGHPHIITL_ ENSG00000156873|ENST00000563588|PHKG2;nc|ENSG00000156873|P15735-2|PHKG2 26.34127834903884 0.1960301806784604 2 {NN|[MP]|[D{I|L}]|[EV]}[RD]{I|L}{I|L}T{I|L} 8 5 {NN|[MP]|[D{I|L}]|[EV]}[RD]{I|L}{I|L} + + 25.005 16.144 2.2255 2.6114 2.6114 48.202 0.0 0.0 0.0 0.0 7.865071892553811 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}[RD]{I|L}{I|L}T{I|L} 2.6114 - 80 + 1 1.946 41555.1 1.0 3699 3451 7150 DOHH2_400M_050219_2,7152 DOHH2_400M_050219_2,7152,AGHPHIITL False True AGHPHIITL 38.804567 479.777209460735 9792615.0 7150.0 ENSG00000156873|ENST00000563588|PHKG2;;nc|ENSG00000156873|P15735-2|PHKG2 5.913168112436931 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7153 38.806 63.0 914940.0 25 0 49614.0 + + 10091 KLDDLHTLY 9 88 559.2981753258174 0 559.2983276247978 PEAK CID FTMS 0 0 0 7150 691937.875 1.0 0 0.0 3 Unmodified _FPSYLSKYL_ ENSG00000047932|ENST00000368498|GOPC;nc|ENSG00000047932|Q9HD26-2|GOPC 16.942295170755138 0.2326366549411506 2 TH{I|L}D 4 -1 19.641 0.0 0.0 1.7591 0.0 0.0 294.1585161630284 353.1832369440063 647.3417531070347 0.0 0.0 0.0 0.0 0 0.5 0.0 0.5 0.0 TH{I|L}D 1.7591 - 120 + 1 1.946 46147.5 1.0 3700 3451 7150 DOHH2_400M_050219_2,7153 DOHH2_400M_050219_2,7153,FPSYLSKYL False False KLDDLHTLY 38.806113 559.298327624798 5741637.5 7150.0 ENSG00000047932|ENST00000368498|GOPC;;nc|ENSG00000047932|Q9HD26-2|GOPC 5.47520128885905 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7154 38.808 92.0 696630.0 25 0 82900.0 + 7221 EERADLIAY 9 70 540.2716238855018 1078.5286948378034 2 540.2724487185478 MULTI CID FTMS 0 0 0 7150 622827.3125 0.2397115783832205 8 -0.5419273376464844 4 Unmodified _EERADLIAY_ ENSG00000172115|ENST00000305786|CYCS 36.12702656103203 0.0967173616627612 2 E{I|L}AY 4 5 50.477 0.0 0.0 4.6802 0.0 0.0 584.291307517775 0.0 584.291307517775 0.0 34.93115345883339 0.0 0.0 0 1.0 0.0 1.1549471895720984 0.0 E{I|L}AY 4.6802 - 86 1 1.946 52767.8 1.0 3701 3451 7150 DOHH2_400M_050219_2,7154 DOHH2_400M_050219_2,7154,EERADLIAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7155 38.81 103.0 527760.0 25 0 90849.0 -1 LHLAVMLG 8 90 435.2510543401133 868.4875557470267 2 435.2511779665947 MULTI CID FTMS 0 0 0 7150 497133.6875 0.8232014774728342 2 -0.1788864135742187 5 Oxidation (M) _LHLAVM(Oxidation (M))LG_ ENSG00000118454|ENST00000370944|ANKRD13C;nc|ENSG00000118454|Q8N6S4-2|ANKRD13C 0.7936320650641473 0.8195151834710337 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.946 49151.7 1.0 3702 3451 7150 DOHH2_400M_050219_2,7155 DOHH2_400M_050219_2,7155,LHLAVMLG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7156 38.813 125.0 601490.0 25 0 101580.0 + 1200 AIDNPLHY 8 92 471.7377104612344 0 471.7377197146416 PEAK CID FTMS 0 0 0 7150 461345.65625 0.3175731471426924 6 -0.4649124145507812 6 Unmodified _AIDNPLHY_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 32.116972079565 0.2111542247894177 2 DN 2 6 18.469 0.0 0.0 1.9617 0.0 0.0 184.12148315831183 525.2478640127839 709.3693471710958 0.0 0.0 0.0 0.0 0 0.75 0.0 0.0 0.0 + DN 1.9617 + + 53 + 1 1.946 64421.2 1.0 3703 3451 7150 DOHH2_400M_050219_2,7156 DOHH2_400M_050219_2,7156,AIDNPLHY False True AIDNPLHY 38.812919 471.737719714642 20759854.0 7150.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 7.597794532775879 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7157 38.815 111.0 528050.0 25 0 38736.0 + 458 AEFQRLPSY 9 78 555.7825854824296 1109.550618031659 2 555.7828246951103 MULTI CID FTMS 0 0 0 7150 444063.53125 0.2525809410720968 7 -0.4976310729980469 7 Unmodified _AEFQRLPSY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 37.07464296494664 0.0915153923251136 2 {[CP]|[EA]}{M(Oxidation (M))|F}QR{I|L}PSY 9 0 + 59.799 0.0 0.0 5.3895 5.3895 84.929 0.0 0.0 0.0 44.44660339379311 12.98332479720628 12.98332479720628 9.208187539523747 0 2.017220322351953 0.0 0.7742275032520141 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}QR{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}[AG]R{I|L}PSY;{[CP]|[EA]}{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{[CP]|[EA]}{I|L}PSY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}{[CP]|[EA]}PSY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}[TA][DP]Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}[PS]{[CP]|[EA]}Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}[VG]{NN|[MP]|[D{I|L}]|[EV]}Y 5.3895;4.5596;2.3055;2.2108;1.7807;0.81675;0.70415;0.61681 +;-;-;-;-;-;-;- + 126 + 1 1.946 52553.1 1.0 3704 3451 7150 DOHH2_400M_050219_2,7157 DOHH2_400M_050219_2,7157,AEFQRLPSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7158 38.819 174.0 409030.0 25 0 72885.0 + 31762 RSDTPLIY 8 94 482.7584718005593 963.5023906679186 2 482.7587768435478 MULTI CID FTMS 0 0 0 7150 265001.40625 0.2713463488014651 7 -0.4976310729980469 8 Unmodified _RSDTPLIY_ ENSG00000196305|ENST00000443024|IARS1 25.399314129420983 0.5099049743284904 2 TP{I|L}{I|L}Y 5 3 34.693 0.0 0.0 3.6007 0.0 0.0 358.1597157209 0.0 358.1597157209 0.0 18.31756235207578 0.0 0.0 0 1.274227503252014 0.0 0.2742275032520141 0.0 + TP{I|L}{I|L}Y 3.6007 + + 90 1 1.946 60016.8 1.0 3705 3451 7150 DOHH2_400M_050219_2,7158 DOHH2_400M_050219_2,7158,RSDTPLIY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7159 38.825 334.0 347250.0 25 0 20455.0 + 32923 SEKLGVMTY 9 156 514.2601245930167 1026.505696252833 2 514.2609741091728 MULTI CID FTMS 0 0 0 7150 197404.28125 0.7063508135191773 -1 0.1210060119628906 9 Unmodified _SEKLGVMTY_ ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1 39.94969957227396 0.0757326808254658 2 [VG]{I|L}KMTDTY 9 7 + 35.636 0.0 0.0 3.4716 3.4716 72.776 0.0 0.0 0.0 5.62551450044289 6.456652627075464 5.62551450044289 4.943663967357949 0 0.8935078169319297 1.5228787452803376 0.6549471895720984 0.0 [VG]{I|L}KMTDTY;[VG]T{[TV]|[{I|L}S]}RMTY;[{I|L}V]GKMTDTY;[VG]{I|L}{[MG]|[TS]}RMTY;[VG]{I|L}K{[ES]|[DT]|[{I|L}C]}MTY;{[ES]|[DT]|[{I|L}C]}[K{I|L}]RMTY;[VG]{I|L}KMTSEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[TV]|[{I|L}S]}RMTY;[Y{M(Oxidation (M))|F}]ST[WK][VP];[Y{M(Oxidation (M))|F}]ST[RP]VGT 3.4716;2.99;2.9235;2.6533;2.5273;2.4156;2.3675;2.2019;2.1976;2.1382 -;-;-;-;-;-;-;-;-;- 785 1 1.946 90350.1 1.0 3706 3451 7150 DOHH2_400M_050219_2,7159 DOHH2_400M_050219_2,7159,SEKLGVMTY True True SEKLGVMTY 38.824696 514.260974109173 1985279.875 7150.0 nc|ENSG00000136758|Q96TA2|YME1L1;;nc|ENSG00000136758|Q96TA2-3|YME1L1;;ENSG00000136758|ENST00000376016|YME1L1 3.271602471669515 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7160 38.833 474.0 132610.0 25 0 11580.0 + 22935 LSEMGKSADY 10 94 550.7484567406758 1099.4823605481515 2 550.7485229372978 MULTI CID FTMS 0 0 0 7150 183620.28125 0.220517967834924 8 -0.5419273376464844 10 Unmodified _LSEMGKSADY_ REV__ENSG00000163214|ENST00000457308|DHX57 24.020572477871973 0.4289996903560794 2 {M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}KNY 6 -1 28.192 0.0 0.0 2.5641 0.0 0.0 313.13227617490776 0.0 313.13227617490776 0.0 17.08297602838357 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.4247425010840047 {M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}KNY 2.5641 - 169 + 1 1.946 54722.0 1.0 3707 3451 7150 DOHH2_400M_050219_2,7160 DOHH2_400M_050219_2,7160,LSEMGKSADY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7161 38.847 800.0 303830.0 25 0 19826.0 + 22930 LSEINKPNFY 10 193 612.816326189918 1223.6180994466358 2 612.8174316287041 MULTI CID FTMS 0 0 0 7150 135051.8125 0.3974666805604006 -2 0.2303504943847656 11 Unmodified _LSEINKPNFY_ ENSG00000067334|ENST00000436063|DNTTIP2 122.17920374332846 0.0003471860834527 2 {I|L}SE{I|L}NKPN{M(Oxidation (M))|F}Y 10 0 + 107.09 0.0 0.0 8.7518 8.7518 92.126 0.0 0.0 0.0 53.37321686376914 15.026975159433531 15.026975159433531 9.164539485499247 0 1.2302046884880935 1.5228787452803376 0.805462187404089 0.9802046884880936 + + {I|L}SE{I|L}NKPN{M(Oxidation (M))|F}Y;{I|L}SE{I|L}GGKPN{M(Oxidation (M))|F}Y;{I|L}SE{I|L}NKPGG{M(Oxidation (M))|F}Y;{I|L}SE{I|L}GGKPGG{M(Oxidation (M))|F}Y;{I|L}SE{I|L}AW[VP]{M(Oxidation (M))|F}Y;{I|L}SE{I|L}NK[YQ]{[ET]|[MV]};{I|L}SE{I|L}NQQKHQ;{I|L}SE{I|L}GGK[YQ]{[ET]|[MV]};{I|L}SE{I|L}[PG][W{I|L}]{M(Oxidation (M))|F}Y;{I|L}SE{I|L}[PG][KG]N{M(Oxidation (M))|F}Y 8.7518;8.0029;7.7173;6.9712;6.5543;6.2061;6.0049;5.4571;5.4118;5.4093 +;-;-;-;-;-;-;-;-;- + 16880 + 1 1.946 177614.1 0.699999988079071 3708 3451 7150 DOHH2_400M_050219_2,7161 DOHH2_400M_050219_2,7161,LSEINKPNFY True True LSEINKPNFY 38.84694 612.817431628704 2572362.0 7150.0 ENSG00000067334|ENST00000436063|DNTTIP2 7.581829229990642 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7162 38.853 307.0 300800.0 25 0 41073.0 39970 VGAPRERA 8 116 428.243609129672 854.4726653261439 2 428.2422973513603 MULTI CID FTMS 0 0 0 7150 129855.4765625 1.0 0 0.0 12 Unmodified _VGAPRERA_ ENST00000330539.1_1_8:37593798-37594005:-|nuORF 2.889219685676258 0.8067950007271085 2 V 1 7 9.6777 0.0 0.0 1.1326 0.0 0.0 737.3934320881541 0.0 737.3934320881541 0.0 6.578766262423441 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1326 + + 28 + 1 1.946 77209.0 1.0 3709 3451 7150 DOHH2_400M_050219_2,7162 DOHH2_400M_050219_2,7162,VGAPRERA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7163 38.866 800.0 193200.0 25 0 18101.0 + 7308 EEVLIPDQKY 10 125 617.3221581374463 1232.6297633416923 2 617.3218871951103 MULTI CID FTMS 0 0 0 7150 107974.21875 0.573163901062821 -1 0.1210060119628906 13 Unmodified _EEVLIPDQKY_ ENSG00000005812|ENST00000355619|FBXL3 83.42873516780209 0.014257832770272 2 EEV{I|L}{I|L}PDQKY 10 0 + 78.868 0.0 0.0 6.3983 6.3983 87.53 0.0 0.0 0.0 66.10333524753781 11.54901959985743 11.54901959985743 9.164539485499247 0 1.305462187404089 1.6989700043360187 0.2302046884880938 0.5866968715561641 + + EEV{I|L}{I|L}PDQKY;EEV{I|L}{I|L}PD[AG]KY;EEV{I|L}{I|L}P{[NV]|[RG]}{[SA]|[TG]}Y;EEV{I|L}{I|L}PEE{I|L}Y;EEV{I|L}{I|L}P[WH]NP;EEV{I|L}{I|L}PEEY{I|L};[DP][KP]DP{I|L}{I|L}V[HC];EEV{I|L}{I|L}{[ET]|[MV]}[C(Carbamidomethyl (C))K]{I|L};EEV{I|L}{I|L}{[ET]|[MV]}[KS]W;{[QN]|[E{I|L}]|[KN]}[Y{M(Oxidation (M))|F}]P{I|L}{I|L}V[HC] 6.3983;5.6548;5.0908;4.8481;4.4736;4.414;3.9929;3.7362;3.6576;3.4233 +;-;-;-;-;-;-;-;-;- + 507 + 1 1.946 117050.8 0.6399999856948853 3710 3451 7150 DOHH2_400M_050219_2,7163 DOHH2_400M_050219_2,7163,EEVLIPDQKY True True EEVLIPDQKY 38.866365 617.32188719511 1202668.375 7150.0 ENSG00000005812|ENST00000355619|FBXL3 7.7717940012613935 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7164 38.88 800.0 138320.0 25 0 17103.0 -1 EMYQELMEMCH 11 114 766.7780767494886 1531.5416005657771 2 766.7764770388603 MULTI CID FTMS 0 0 0 7150 99466.109375 0.3838062155226182 10 -0.6982421875 14 Carbamidomethyl (C),2 Oxidation (M) _EMYQELM(Oxidation (M))EM(Oxidation (M))C(Carbamidomethyl (C))H_ ENSG00000144010|ENST00000639673|TRIM43B;ENSG00000144015|ENST00000272395|TRIM43 1.3295316138638542 0.8688751186870782 2 {[QV]|[N{I|L}]|[RA]|[KV]}MVQ 5 -1 37.335 0.0 0.0 2.4377 0.0 0.0 0.0 943.2252913218896 943.2252913218896 18.183246301495902 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.5283773187068795 {[QV]|[N{I|L}]|[RA]|[KV]}MVQ 2.4377 - 404 1 1.946 81847.9 0.6000000238418579 3711 3451 7150 DOHH2_400M_050219_2,7164 DOHH2_400M_050219_2,7164,EMYQELMEMCH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7165 38.89 485.0 275590.0 25 0 14397.0 + 18960 LDEKRVTM 8 164 496.26512059417735 990.5156882551548 2 496.2666503787041 MULTI CID FTMS 0 0 0 7150 93663.609375 0.1466489315480722 4 -0.3745689392089844 15 Unmodified _LDEKRVTM_ REV__ENSG00000169258|ENST00000303991|GPRIN1;REV__nc|ENSG00000169258|Q7Z2K8-2|GPRIN1 19.256988751693697 0.6264283240490721 2 {[TV]|[{I|L}S]}RREVTM 8 -1 + 35.895 0.0 0.0 3.6238 3.6238 69.423 0.0 0.0 0.0 1.887503315119062 4.722649882229973 1.887503315119062 1.887503315119062 0 0.5 0.958607314841775 0.6694451763165201 0.0 {[TV]|[{I|L}S]}RREVTM;{NN|[MP]|[D{I|L}]|[EV]}RRTVTM;{NN|[MP]|[D{I|L}]|[EV]}[RK]EVTM;[Q{I|L}][W{I|L}]TVTM;[VP]S[KT]EVTM;[VP][PG]YKVTM;[PS]V[KT]EVTM;{[HG]|PP}[VG]YKVTM;{[TV]|[{I|L}S]}RR{[TV]|[{I|L}S]}EM;{NN|[MP]|[D{I|L}]|[EV]}[RK]{[TV]|[{I|L}S]}EM 3.6238;3.4333;3.1294;1.7942;1.5002;1.49;1.4575;1.1398;1.0252;0.5307 -;-;-;-;-;-;-;-;-;- 312 1 1.946 104574.2 1.0 3712 3451 7150 DOHH2_400M_050219_2,7165 DOHH2_400M_050219_2,7165,LDEKRVTM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7166 38.894 218.0 327410.0 25 0 30248.0 -1 VKNFAQLTV 9 115 531.3019643459801 0 531.3010742068291 PEAK CID FTMS 0 0 0 7150 261000.21875 0.3167751572628798 5 -0.4299774169921875 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VKNFAQLTV_ chr3:186790255-186791725|48|15.94|0.82|4.28|-|ENST00000433496|RFC4,RFC4;ENSG00000163918|ENST00000296273|RFC4;ENST00000479307.5_1_3:186508099-186512490:-|nuORF;ENST00000494047.5_1_3:186509405-186522502:-|nuORF;nc|ENSG00000163918|P35249-2|RFC4 6.2057823575117 0.3444685223463735 2 {I|L} 1 -1 6.9897 0.0 0.0 0.65904 0.0 0.0 126.07034607301632 818.4175509088499 944.4878969818662 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.65904 + + 61 + 1 1.946 64160.2 1.0 3713 3451 7150 DOHH2_400M_050219_2,7166 DOHH2_400M_050219_2,7166,VKNFAQLTV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7167 38.899 253.0 324570.0 25 0 32331.0 + 23038 LSKQPMPL 8 115 457.2641402460201 912.5137275588404 2 457.2640869021416 MULTI CID FTMS 0 0 0 7150 185442.0625 0.7249170546834091 4 -0.3745689392089844 17 Unmodified _LSKQPMPL_ REV__ENSG00000117479|ENST00000236137|SLC19A2 14.581692164780916 0.6954967302934248 2 {[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}{I|L}HR 7 -1 + 25.494 0.0 0.0 2.7938 2.7938 79.222 0.0 0.0 0.0 12.729604522193831 11.36410176859158 11.36410176859158 15.070844780971054 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}{I|L}HR;{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}[RH]{I|L} 2.7938;1.1422 -;- 61 + 1 1.946 67160.8 1.0 3714 3451 7150 DOHH2_400M_050219_2,7167 DOHH2_400M_050219_2,7167,LSKQPMPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7168 38.907 442.0 220220.0 25 0 14966.0 + 25427 NEDYPVEIHEY 11 112 704.3071975058509 1406.5998420785018 2 704.3067504763603 MULTI CID FTMS 0 0 0 7150 167665.890625 0.9589204409886768 -1 0.1210060119628906 18 Unmodified _NEDYPVEIHEY_ ENSG00000197223|ENST00000410067|C1D;ENST00000485709.1_1_2:68273401-68290109:-|nuORF 74.19965305603844 0.0202339408097979 2 {[QD]|[EN]|[WG]|[KD]|[RS]}DYPVE{I|L}[MT]N 11 3 56.472 0.0 0.0 4.0148 0.0 0.0 0.0 98.02537714176016 98.02537714176016 15.739087409443188 0.0 0.0 0.0 0 1.325257498915995 0.0 0.75 0.3252574989159953 {[QD]|[EN]|[WG]|[KD]|[RS]}DYPVE{I|L}[MT]N 4.0148 - 626 + 1 1.946 74464.9 1.0 3715 3451 7150 DOHH2_400M_050219_2,7168 DOHH2_400M_050219_2,7168,NEDYPVEIHEY True True NEDYPVEIHEY 38.906935 704.30675047636 1763053.0 7150.0 ENST00000485709.1_1_2:68273401-68290109:-|nuORF;;ENSG00000197223|ENST00000410067|C1D 9.67055320739746 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7169 38.918 617.0 249080.0 25 0 12483.0 -1 0 191 380.23013098690166 379.22285452030167 1 380.2321960330009 MULTI CID FTMS 0 0 0 7150 91583.6171875 1.0 0 0.0 19 2 R 1 -1 11.109 0.0 0.0 2.9295 0.0 0.0 205.11114294979228 0.0 205.11114294979228 0.0 0.1401436180012183 0.0 0.0 0 0.0 0.0 0.0 0.0 R 2.9295 - 40 + 1 1.946 123089.2 1.0 3716 3451 7150 DOHH2_400M_050219_2,7169 DOHH2_400M_050219_2,7169, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7171 38.922 22.0 2723800.0 25 0 466650.0 + 9842 FPENKKQPY 9 66 575.7994555006755 1149.584358068151 2 575.8002197146416 MULTI CID FTMS 0 0 0 7170 2171264.0 0.0702280383906272 9 -0.5764503479003906 1 Unmodified _FPENKKQPY_ ENSG00000051382|ENST00000674063|PIK3CB;ENST00000481749.5_1_3:138374233-138426144:-|nuORF 39.957323273325 0.0756908302845263 2 M{I|L}EPT 5 7 65.305 0.0 0.0 5.6808 0.0 0.0 0.0 575.2968233697874 575.2968233697874 32.57007180900061 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3494850021680094 0.0 M{I|L}EPT 5.6808 - 88 + 1 1.946 50558.4 1.0 3717 3452 7170 DOHH2_400M_050219_2,7171 DOHH2_400M_050219_2,7171,FPENKKQPY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7172 38.924 33.0 1591400.0 25 0 315520.0 + 33373 SGKSGVKG 8 80 360.2060064383613 718.3974599435227 2 360.2064697146416 MULTI CID FTMS 0 0 0 7170 1933461.75 1.0 0 0.0 2 Unmodified _SGKSGVKG_ REV__ENST00000561077.1_1_15:59397440-59406659:+|nuORF 0.6903765706972694 0.8201419426409876 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.946 46420.9 1.0 3718 3452 7170 DOHH2_400M_050219_2,7172 DOHH2_400M_050219_2,7172,SGKSGVKG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7173 38.926 86.0 767950.0 25 0 89696.0 + 32888 SEIGKAVGF 9 79 454.2474158620934 906.4802787909867 2 454.2475158572197 MULTI CID FTMS 0 0 0 7170 612958.5625 0.4958258429482762 -1 0.1217918395996093 3 Unmodified _SEIGKAVGF_ ENSG00000092853|ENST00000318121|CLSPN;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN 34.10243960390752 0.1078313939113124 2 {[ES]|[DT]|[{I|L}C]}{I|L}GK{[VA]|[{I|L}G]}G{M(Oxidation (M))|F} 9 0 + 29.503 0.0 0.0 3.2547 3.2547 67.999 0.0 0.0 0.0 8.660861026799719 7.658759741222777 7.658759741222777 1.7069622716897506 0 0.6861818737241735 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}{I|L}GK{[VA]|[{I|L}G]}G{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}GK{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F} 3.2547;3.0664 +;- + 242 + 1 1.946 60939.2 1.0 3719 3452 7170 DOHH2_400M_050219_2,7173 DOHH2_400M_050219_2,7173,SEIGKAVGF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7174 38.928 144.0 536940.0 25 0 53124.0 + 36802 TEIDDTKVF 9 113 534.2661585111764 1066.5177640891527 2 534.2667724490166 MULTI CID FTMS 0 0 0 7170 394324.34375 0.211415798588888 2 -0.181610107421875 4 Unmodified _TEIDDTKVF_ ENSG00000100592|ENST00000360909|DAAM1;nc|ENSG00000100592|Q9Y4D1-3|DAAM1;nc|ENSG00000100592|Q9Y4D1|DAAM1 26.268140514670165 0.1969607489560049 2 {[ET]|[MV]}{I|L}DDTKV{M(Oxidation (M))|F} 9 0 + 41.872 0.0 0.0 3.926 3.926 82.479 0.0 0.0 0.0 -1.6415226129103644 12.403405327429413 -1.6415226129103644 16.709412807357747 0 0.4247425010840047 0.0 0.0 0.0 + + {[ET]|[MV]}{I|L}DDTKV{M(Oxidation (M))|F};{[ET]|[MV]}{I|L}DM{[NV]|[RG]}V{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}{[CA]|SS}DTKV{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}C(Carbamidomethyl (C))ETKV{M(Oxidation (M))|F};[VP][VP]TDD{I|L}[DP];[NP][PS]V[WR][DP];{[{M(Oxidation (M))|F}H]|[RQ]}E{I|L}[{M(Oxidation (M))|F}E]V{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}EVK[HS][PS];{[{M(Oxidation (M))|F}H]|[RQ]}EVK{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F};[NP][PS]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V{M(Oxidation (M))|F} 3.926;2.3593;2.0519;1.8135;1.6777;1.2343;1.1143;1.0705;0.99716;0.85833 +;-;-;-;-;-;-;-;-;- + 482 + 1 1.946 62302.1 1.0 3720 3452 7170 DOHH2_400M_050219_2,7174 DOHH2_400M_050219_2,7174,TEIDDTKVF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7175 38.932 166.0 450870.0 25 0 43558.0 + + 6610 GEVPFNHEI 9 105 520.2509928757277 1038.4874328182552 2 521.2537719607353 MULTI CID FTMS 0 0 0 7170 334151.15625 0.998036191753928 -1 0.1217918395996093 5 Unmodified _EAQWGALHQ_ ENSG00000168090|ENST00000303904|COPS6 14.838274106304384 0.4350285940865338 2 {[DA]|[EG]}V[EP]M{I|L}V 8 -1 35.64 0.0 0.0 3.4319 0.0 0.0 0.0 181.03385550796148 181.03385550796148 10.268477219983223 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8807196863200843 0.0 {[DA]|[EG]}V[EP]M{I|L}V 3.4319 - 370 1 1.946 64304.4 1.0 3721 3452 7170 DOHH2_400M_050219_2,7175 DOHH2_400M_050219_2,7175,EAQWGALHQ False False GEVPFNHEI 38.931752 521.253771960735 8381376.0 7170.0 ENSG00000168090|ENST00000303904|COPS6 6.4028652509053545 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7176 38.939 382.0 349280.0 25 0 57615.0 + 32840 SEGQEPALRSW 11 131 630.3040432917828 1258.5935336503655 2 630.3051025271416 MULTI CID FTMS 0 0 0 7170 208395.25 0.6527819434644748 -1 0.1217918395996093 6 Unmodified _SEGQEPALRSW_ ENSG00000075702|ENST00000401500|WDR62;nc|ENSG00000075702|O43379|WDR62 128.86945502625275 0.0503664432907914 2 [AG]YR{I|L}APEQG 10 9 68.185 0.0 0.0 5.4176 0.0 0.0 0.0 213.0498122085513 213.0498122085513 43.97730666700717 0.0 0.0 0.0 0 2.004432191740108 1.0 0.8494850021680094 1.2302046884880935 [AG]YR{I|L}APEQG 5.4176 - 381 1 1.946 100742.6 1.0 3722 3452 7170 DOHH2_400M_050219_2,7176 DOHH2_400M_050219_2,7176,SEGQEPALRSW True True SEGQEPALRSW 38.938625 630.305102527142 1996984.25 7170.0 nc|ENSG00000075702|O43379|WDR62;;ENSG00000075702|ENST00000401500|WDR62 8.48861821492513 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7177 38.946 405.0 312350.0 25 0 28581.0 + 6418 EAAIRSVEL 9 136 494.27702982779977 986.5395067223996 2 494.2770263552666 MULTI CID FTMS 0 0 0 7170 171558.09375 0.5638598461085276 -1 0.1217918395996093 7 Unmodified _EAAIRSVEL_ ENSG00000157538|ENST00000309117|VPS26C;ENST00000399000.7_1_21:38597847-38603826:-|nuORF;ENST00000497493.1_1_21:38599661-38600668:-|nuORF;nc|ENSG00000157538|O14972-2|VPS26C 72.96794272382148 0.0199516581995792 2 {[CP]|[EA]}A{I|L}SRVE{I|L} 9 2 + 33.215 0.0 0.0 3.3668 3.3668 66.079 0.0 0.0 0.0 0.1140252048638572 13.467874862246564 0.1140252048638572 0.1140252048638572 0 1.6989700043360187 0.0 1.960409376976188 0.0 {[CP]|[EA]}A{I|L}SRVE{I|L};{[QN]|[E{I|L}]|[KN]}[QT]RVE{I|L};{[QN]|[E{I|L}]|[KN]}[QT]{I|L}AAE{I|L};{[QN]|[E{I|L}]|[KN]}[RK]EAE{I|L};[QP]{I|L}[PS]SV{M(Oxidation (M))|F}{I|L};[PG]A{I|L}[PS]SV{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[QT][VG]VE{I|L};[TA][W{I|L}]{I|L}AAE{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RVE{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AAE{I|L} 3.3668;3.3552;3.2174;2.9462;2.478;2.4316;2.4164;2.3862;2.3715;2.2337 -;-;-;-;-;-;-;-;-;- 613 1 1.946 95722.5 1.0 3723 3452 7170 DOHH2_400M_050219_2,7177 DOHH2_400M_050219_2,7177,EAAIRSVEL True True EAAIRSVEL 38.945862 494.277026355267 1295251.0 7170.0 ENST00000497493.1_1_21:38599661-38600668:-|nuORF;;ENSG00000157538|ENST00000309117|VPS26C;;nc|ENSG00000157538|O14972-2|VPS26C;;ENST00000399000.7_1_21:38597847-38603826:-|nuORF 3.741177241007487 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7178 38.96 800.0 157010.0 25 0 10216.0 + 7206 EEQPKNYQVW 10 158 660.8150740396729 1319.6155951461458 2 660.8148681521416 MULTI CID FTMS 0 0 0 7170 149425.96875 1.0 0 0.0 8 Unmodified _EEQPKNYQVW_ ENSG00000168522|ENST00000302279|FNTA;ENST00000526755.5_1_8:42911676-42932640:+|nuORF;nc|ENSG00000168522|P49354-2|FNTA 69.10491478415734 0.0189654488676922 2 [YK]NPQEEQVW 10 6 + 62.216 0.0 0.0 4.7147 4.7147 73.549 0.0 0.0 0.0 2.087100199064018 7.174839442139067 2.087100199064018 2.087100199064018 0 0.5 0.0 1.079689690656103 0.8494850021680094 [YK]NPQEEQVW;[AG]YN[KP]EEQVW;[AG]EE{[QV]|[N{I|L}]|[RA]|[KV]}Q{M(Oxidation (M))|F}QVW;EEQ{[QV]|[N{I|L}]|[RA]|[KV]}Q{M(Oxidation (M))|F}QVW;{[CT]|[{M(Oxidation (M))|F}G]}VQEEQ[QA]VW;[YK]NPQEE[AG]VW;[YK]NP[AG]EEQVW;[YK]GGPQEEQVW;[YK]NPQEQEVW;{[CT]|[{M(Oxidation (M))|F}G]}SN[KP]EEQVW 4.7147;4.5565;4.4242;4.3972;4.171;4.0202;4.0202;4.0202;3.9916;3.9095 -;-;-;-;-;-;-;-;-;- 5906 1 1.946 97002.3 0.7300000190734863 3724 3452 7170 DOHH2_400M_050219_2,7178 DOHH2_400M_050219_2,7178,EEQPKNYQVW True True EEQPKNYQVW 38.9597 660.814868152142 1354014.375 7170.0 ENST00000526755.5_1_8:42911676-42932640:+|nuORF;;ENSG00000168522|ENST00000302279|FNTA;;nc|ENSG00000168522|P49354-2|FNTA 6.266780376434326 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7179 38.965 274.0 322320.0 25 0 23918.0 + 19932 LICPHISPHI 10 128 565.3151731267694 1128.6157933203388 2 565.3162719607353 MULTI CID FTMS 0 0 0 7170 129291.75 1.0 0 0.0 9 Unmodified _LICPHISPHI_ REV__ENST00000501520.1_1_16:28303156-28303378:-|nuORF 36.12702656103203 0.1984647928738587 2 {I|L}{I|L}CP{I|L}AG[KS]D{I|L} 11 -1 + 77.946 0.0 0.0 6.9064 6.9064 81.081 0.0 0.0 0.0 51.17539548562371 12.35028299170665 12.35028299170665 1.8045606445813007 0 1.1382104921644451 2.0 1.1307196863200843 0.0 {I|L}{I|L}CP{I|L}AG[KS]D{I|L};{I|L}{I|L}CP{I|L}Q[KS]D{I|L};{I|L}{I|L}CP{I|L}A[WK]W;{I|L}{I|L}CP{I|L}{M(Oxidation (M))|F}[RN][PG];{I|L}{I|L}C[YK]{[QS]|[NT]}K{M(Oxidation (M))|F};{I|L}{I|L}[{M(Oxidation (M))|F}V]VK[{M(Oxidation (M))|F}T]Y;{I|L}{I|L}CP{I|L}{M(Oxidation (M))|F}QQ[PA];{I|L}{I|L}CP{I|L}AG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PA];{I|L}{I|L}[{M(Oxidation (M))|F}V]VD[RN][PG];{I|L}{I|L}CP{I|L}Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PA] 6.9064;6.7465;4.8952;4.5614;4.3312;4.0222;3.9687;3.9132;3.7708;3.7533 -;-;-;-;-;-;-;-;-;- 1098 + 1 1.946 70389.8 1.0 3725 3452 7170 DOHH2_400M_050219_2,7179 DOHH2_400M_050219_2,7179,LICPHISPHI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7180 38.969 229.0 227010.0 25 0 34509.0 + 32679 SDINVRSW 8 89 488.74578541323774 0 488.7462341189384 PEAK CID FTMS 0 0 0 7170 97603.0390625 0.8191920959027114 -1 0.1217918395996093 10 Unmodified _SDINVRSW_ ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L 31.26834338654808 0.2187394806911077 2 {I|L}NVR 4 4 31.529 0.0 0.0 3.2321 0.0 0.0 202.058879320813 288.09775720767817 490.1566365284912 0.0 0.0 0.0 0.0 0 1.25 0.0 0.0 0.4247425010840047 + {I|L}NVR 3.2321 + + 102 + 1 1.946 47440.0 1.0 3726 3452 7170 DOHH2_400M_050219_2,7180 DOHH2_400M_050219_2,7180,SDINVRSW False True SDINVRSW 38.969062 488.746234118938 732665.375 7170.0 nc|ENSG00000121210|A2VDJ0|TMEM131L;;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;;ENSG00000121210|ENST00000409959|TMEM131L;;nc|ENSG00000121210|A2VDJ0-6|TMEM131L 3.687413295110067 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7181 38.975 315.0 468970.0 25 0 43111.0 -1 0 121 603.9673254404012 1808.880146921404 3 603.9730712771416 MULTI CID FTMS 0 0 0 7170 213811.234375 0.1022070871249917 -8 0.6531944274902344 11 2 {M(Oxidation (M))|F}{I|L}H{I|L}{M(Oxidation (M))|F}WAC(Carbamidomethyl (C))V{[CA]|SS}{[DS]|[MA]|[CV]|TT}{I|L}Q 15 -1 + 67.333 0.0 0.0 3.7224 3.7224 68.164 0.0 0.0 0.0 0.6233433846648637 0.6233433846648637 0.6233433846648637 0.6233433846648637 0 0.0 0.0 0.0 1.7312958898387063 {M(Oxidation (M))|F}{I|L}H{I|L}{M(Oxidation (M))|F}WAC(Carbamidomethyl (C))V{[CA]|SS}{[DS]|[MA]|[CV]|TT}{I|L}Q;[H{I|L}][NP]{[CA]|SS}VC(Carbamidomethyl (C))AW{M(Oxidation (M))|F}{I|L}H{I|L}E;[NP]{I|L}HAA{[QS]|[NT]}{M(Oxidation (M))|F}W{M(Oxidation (M))|F}{I|L}H{I|L}E;[NP]{I|L}HAA[KS]{M(Oxidation (M))|F}W{M(Oxidation (M))|F}{I|L}H{I|L}E;[NP]{I|L}HAA[YQ]AW{M(Oxidation (M))|F}{I|L}H{I|L}E;[NP]{I|L}H{I|L}N[YE][NG]{M(Oxidation (M))|F}{I|L}H{I|L}E;[NP]{I|L}H{[CA]|SS}VC(Carbamidomethyl (C))AW{M(Oxidation (M))|F}{I|L}H{I|L}E;[NP]{I|L}H{I|L}{[WT]|[RM]}Y[C(Carbamidomethyl (C))N]{I|L}H{I|L}E;[NP]{I|L}H[KC]{[DS]|[MA]|[CV]|TT}AW{M(Oxidation (M))|F}{I|L}H{I|L}E;[NP]{I|L}H{[CA]|SS}G{[DS]|[MA]|[CV]|TT}AW{M(Oxidation (M))|F}{I|L}H{I|L}E 3.7224;3.6879;3.5988;3.5988;3.156;3.1158;3.0431;2.9659;2.7696;2.7103 -;-;-;-;-;-;-;-;-;- 2080 + 1 1.946 116911.5 1.0 3727 3452 7170 DOHH2_400M_050219_2,7181 DOHH2_400M_050219_2,7181, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7183 38.98 58.0 1031600.0 25 0 150400.0 + 9747 FMKPGKVVL 9 74 509.8092540288391 1017.603955124478 2 509.8096496462822 MULTI CID FTMS 0 0 0 7182 822820.8125 0.6627832608365353 1 -0.1245155334472656 1 Unmodified _FMKPGKVVL_ ENSG00000131469|ENST00000253788|RPL27;ENST00000587478.1_1_17:41150475-41150953:+|nuORF;ENST00000593262.1_1_17:41150683-41150953:+|nuORF 34.10243960390752 0.1078313939113124 2 GGPVK{[YD]|[{M(Oxidation (M))|F}M]}V{I|L} 9 6 34.452 0.0 0.0 3.3856 0.0 0.0 71.07422072578281 0.0 71.07422072578281 0.0 20.18745656177388 0.0 0.0 0 0.6421590589602533 0.0 0.3494850021680094 0.0 GGPVK{[YD]|[{M(Oxidation (M))|F}M]}V{I|L} 3.3856 - 188 1 1.946 51405.1 1.0 3728 3453 7182 DOHH2_400M_050219_2,7183 DOHH2_400M_050219_2,7183,FMKPGKVVL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7184 38.982 87.0 585580.0 25 0 65543.0 + -1 ASDRNIVLY 9 55 525.7822224639784 1049.5498919947568 2 525.7825805544853 MULTI CID FTMS 0 0 0 7182 457895.5 0.0394740256375928 4 -0.2860260009765625 2 Oxidation (M) _IVEGM(Oxidation (M))PLLY_ ENSG00000164934|ENST00000612750|DCAF13 18.13498045792455 0.3457906370836843 2 {I|L}V{I|L}Y 4 -1 41.938 0.0 0.0 3.9958 0.0 0.0 543.2392445294937 0.0 543.2392445294937 0.0 27.24546265559709 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}V{I|L}Y 3.9958 - 30 1 1.946 46961.9 1.0 3729 3453 7182 DOHH2_400M_050219_2,7184 DOHH2_400M_050219_2,7184,IVEGMPLLY False False ASDRNIVLY 38.981579 525.782580554485 213690552.0 7182.0 ENSG00000164934|ENST00000612750|DCAF13 5.474816958109538 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7185 38.984 107.0 631620.0 25 0 83969.0 28090 PPKIPGGA 8 113 368.7202646534795 735.425976373759 2 368.7198974490166 MULTI CID FTMS 0 0 0 7182 607451.125 0.7740363805663328 1 -0.1245155334472656 3 Unmodified _PPKIPGGA_ ENSG00000173486|ENST00000309366|FKBP2;ENST00000541388.1_1_11:64010007-64011498:+|nuORF 0.7936320650641473 0.8195151834710337 2 W 1 8 15.485 0.0 0.0 2.1055 0.0 0.0 531.3366341880153 0.0 531.3366341880153 0.0 -2.4742501084004687 -2.4742501084004687 0.0 0 0.0 0.0 0.0 0.0 W 2.1055 - 12 + 1 1.946 57943.4 1.0 3730 3453 7182 DOHH2_400M_050219_2,7185 DOHH2_400M_050219_2,7185,PPKIPGGA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7186 38.986 99.0 566250.0 25 0 88873.0 + 37071 TGIARVPL 8 86 413.7608216832372 825.5070904332745 2 413.7607604861259 MULTI CID FTMS 0 0 0 7182 567673.375 0.7734748166922114 1 -0.1245155334472656 4 Unmodified _TGIARVPL_ ENSG00000125835|ENST00000381342|SNRPB;ENSG00000128739|ENST00000390687|SNRPN;nc|ENSG00000125835|P14678-3|SNRPB;nc|ENSG00000125835|P14678|SNRPB;nc|ENSG00000128739|P63162-2|SNRPN 43.85829265575387 0.1697421968005898 2 TG{I|L}ARV[{I|L}P] 8 0 + 75.399 0.0 0.0 9.1336 9.1336 97.95 0.0 0.0 0.0 66.44647232932286 4.56022414822435 4.56022414822435 27.54554718523508 0 1.805462187404089 1.3979400086720375 0.0 0.0 + + TG{I|L}ARV[{I|L}P];{[SA]|[TG]}{I|L}ARV[{I|L}P];{[SA]|[TG]}{I|L}[{I|L}V]A[RP];T[Q{I|L}]RV[{I|L}P];T{I|L}{I|L}RN[{I|L}P] 9.1336;5.7968;3.9521;3.6368;2.9137 +;+;-;-;- + 165 + 1 1.946 48862.9 1.0 3731 3453 7182 DOHH2_400M_050219_2,7186 DOHH2_400M_050219_2,7186,TGIARVPL False True TGIARVPL 38.985997 413.760760486126 11482162.0 7182.0 nc|ENSG00000125835|P14678-3|SNRPB;;ENSG00000128739|ENST00000390687|SNRPN;;nc|ENSG00000125835|P14678|SNRPB;;ENSG00000125835|ENST00000381342|SNRPB;;nc|ENSG00000128739|P63162-2|SNRPN 4.129613637924194 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7187 38.988 107.0 749230.0 25 0 134130.0 + 6471 EAFVRHIL 8 83 492.78466226741904 983.554771601638 2 492.7848083376884 MULTI CID FTMS 0 0 0 7182 536490.5625 0.3635842840385301 -1 0.0570945739746093 5 Unmodified _EAFVRHIL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000412707.1_1_17:69617202-69617574:+|nuORF 96.28474662873226 0.07713372045102 2 EA{M(Oxidation (M))|F}VRH{I|L}{I|L} 8 0 + 90.259 0.0 0.0 9.1768 9.1768 97.82 0.0 0.0 0.0 78.74343476811902 11.40978057358332 11.40978057358332 24.987737688117235 0 2.1549471895720984 2.0 0.0 0.2614393726401688 + + EA{M(Oxidation (M))|F}VRH{I|L}{I|L};EA{M(Oxidation (M))|F}VR{I|L}{I|L}H;{[CP]|[EA]}{M(Oxidation (M))|F}VRH{I|L}{I|L} 9.1768;6.6362;6.0267 +;-;+ + 191 + 1 1.946 65119.6 1.0 3732 3453 7182 DOHH2_400M_050219_2,7187 DOHH2_400M_050219_2,7187,EAFVRHIL True True EAFVRHIL 38.988266 492.784808337688 7080294.0 7182.0 ENSG00000092841|ENST00000550697|MYL6;;ENST00000412707.1_1_17:69617202-69617574:+|nuORF 5.760186831156413 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7188 38.992 217.0 283230.0 25 0 32050.0 + 8287 EQLTLAQSL 9 100 501.7770731186185 0 501.7769348025322 PEAK CID FTMS 0 0 0 7182 267373.53125 0.8588728446625167 2 -0.1956825256347656 6 Unmodified _EQLTLAQSL_ REV__ENSG00000186684|ENST00000664447|CYP27C1;REV__nc|ENSG00000186684|Q4G0S4-1|CYP27C1;REV__nc|ENSG00000186684|Q4G0S4|CYP27C1 30.63653989081413 0.1077493867305487 2 {I|L}{I|L}SDN 5 -1 18.318 0.0 0.0 1.829 0.0 0.0 388.197504536262 68.05130945377186 456.24881399003385 0.0 0.0 0.0 0.0 0 0.5 0.0 0.6139829889124311 0.2396518287104437 {I|L}{I|L}SDN 1.829 - 117 + 1 1.946 52523.5 1.0 3733 3453 7182 DOHH2_400M_050219_2,7188 DOHH2_400M_050219_2,7188,EQLTLAQSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7189 38.998 320.0 229120.0 25 0 20844.0 + 16727 KEWVTPKEF 9 103 582.308070290261 1162.6015876473218 2 582.3086425662041 MULTI CID FTMS 0 0 0 7182 230108.03125 0.7162484141232737 1 -0.1245155334472656 7 Unmodified _KEWVTPKEF_ ENSG00000143799|ENST00000366794|PARP1 70.49555756994154 0.020907391616941 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVTPKE{M(Oxidation (M))|F} 9 0 + 76.02 0.0 0.0 6.5388 6.5388 90.175 0.0 0.0 0.0 2.4323139047743894 55.7126032092652 2.4323139047743894 9.370470067515498 0 2.774227503252014 0.0 1.055462187404089 0.5941876774005248 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVTPKE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TVWPKE{M(Oxidation (M))|F};[WE]KVTPKE{M(Oxidation (M))|F};{[TV]|[{I|L}S]}GWVTPKE{M(Oxidation (M))|F};KEWVTP[Q{I|L}]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV{[DA]|[EG]}PKE{M(Oxidation (M))|F};{[TV]|[{I|L}S]}GTVWPKE{M(Oxidation (M))|F};{[ET]|[MV]}{[NV]|[RG]}VTPKE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PT{[RE]|[WV]}KE{M(Oxidation (M))|F};{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}VTPKE{M(Oxidation (M))|F} 6.5388;5.7328;5.5185;5.4896;5.3212;4.9408;4.6837;4.575;4.297;4.0897 +;-;-;-;-;-;-;-;-;- + 921 1 1.946 58094.9 1.0 3734 3453 7182 DOHH2_400M_050219_2,7189 DOHH2_400M_050219_2,7189,KEWVTPKEF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7190 39.003 249.0 503010.0 25 0 253890.0 41369 VPKKSSHG 8 105 420.2412416327421 838.4679303322843 2 420.2411682009697 MULTI CID FTMS 0 0 0 7182 181018.09375 0.2291196979339756 -1 0.0570945739746093 8 Unmodified _VPKKSSHG_ ENSG00000176246|ENST00000315683|OR4L1 5.760428011301431 0.7893668129297577 2 {I|L} 1 8 10.837 0.0 0.0 1.2925 0.0 0.0 707.373079723689 0.0 707.373079723689 0.0 -0.1046695341782122 -0.1046695341782122 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2925 - 25 + 1 1.946 104363.3 1.0 3735 3453 7182 DOHH2_400M_050219_2,7190 DOHH2_400M_050219_2,7190,VPKKSSHG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7191 39.017 800.0 143600.0 25 0 10932.0 6846 EEDQRTYVF 9 140 593.7719521842182 1185.5293514352363 2 593.7722045779228 MULTI CID FTMS 0 0 0 7182 174106.953125 0.356794296181361 3 -0.2510910034179687 9 Unmodified _EEDQRTYVF_ ENSG00000105771|ENST00000270066|SMG9;ENST00000595700.5_1_19:44242246-44254893:-|nuORF;nc|ENSG00000105771|Q9H0W8-2|SMG9 29.081581746732265 0.1611639662936252 2 {NN|[MP]|[D{I|L}]|[EV]}[HV]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YV{M(Oxidation (M))|F} 9 5 {NN|[MP]|[D{I|L}]|[EV]}[HV]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YV + + 17.659 -7.9013 -0.7743 1.4895 1.4895 47.107 0.0 0.0 0.0 0.0 2.174165578762484 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[HV]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YV{M(Oxidation (M))|F} 1.4895 - 199 + 1 1.946 88422.5 0.7400000095367432 3736 3453 7182 DOHH2_400M_050219_2,7191 DOHH2_400M_050219_2,7191,EEDQRTYVF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7192 39.023 378.0 518080.0 25 0 48002.0 + 432 AEEPLAGRTW 10 143 565.2851966450795 1128.555840356959 2 565.2860595583916 MULTI CID FTMS 0 0 0 7182 157274.5 0.1371998920019035 -1 0.0570945739746093 10 Unmodified _AEEPLAGRTW_ ENST00000529704.5_1_11:67119307-67120167:-|nuORF;ENST00000534515.1_1_11:67119307-67119526:-|nuORF 69.33821966488729 0.0189579340102328 2 {[CP]|[EA]}EP{I|L}AGRTW 10 0 + 76.177 0.0 0.0 6.75 6.75 91.174 0.0 0.0 0.0 6.059837384595923 10.131769785048093 6.059837384595923 10.131769785048093 0 1.575257498915995 0.0 0.9802046884880936 0.4247425010840047 + + {[CP]|[EA]}EP{I|L}AGRTW;{[CP]|[EA]}EP{I|L}AG[KS]D{I|L};{[CP]|[EA]}EP{I|L}QRTW;[EP]CP{I|L}AG[KS]D{I|L};[{I|L}P][HN]GA{I|L}PC[HA];{[CP]|[EA]}EP{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]}SW;{[CT]|[{M(Oxidation (M))|F}G]}TRGA{I|L}PC[HA];[EP]CP{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]}SW;{[CP]|[EA]}EP{I|L}A[WK]W;{[CP]|[EA]}EP{I|L}AG{[VA]|[{I|L}G]}C(Carbamidomethyl (C)){I|L} 6.75;5.8522;5.7067;5.6763;5.3564;5.2959;5.1614;5.12;4.9348;4.8701 +;-;-;-;-;-;-;-;-;- + 1259 + 1 1.946 149678.5 1.0 3737 3453 7182 DOHH2_400M_050219_2,7192 DOHH2_400M_050219_2,7192,AEEPLAGRTW True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7193 39.028 216.0 242420.0 25 0 27650.0 + 20562 LLNCKPTDII 10 105 377.2133069541743 1128.618091462723 3 377.2140075564384 MULTI CID FTMS 0 0 0 7182 142923.125 0.8633446075884373 1 -0.1245155334472656 11 Unmodified _LLNCKPTDII_ REV__ENSG00000172382|ENST00000302641|PRSS27 10.073929032068715 0.6785112666868882 2 {I|L} 1 -1 12.474 0.0 0.0 1.1053 0.0 0.0 997.523332406862 0.0 997.523332406862 0.0 -13.723637474483468 -13.723637474483468 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1053 + + 38 + 1 1.946 47986.7 1.0 3738 3453 7182 DOHH2_400M_050219_2,7193 DOHH2_400M_050219_2,7193,LLNCKPTDII False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7194 39.041 800.0 130250.0 25 0 3067.9 + -1 QSENPWDNKAVY 12 156 725.8336975753275 1449.652842217455 2 726.3351928591728 MULTI CID FTMS 0 0 0 7182 122670.8515625 1.0 0 0.0 12 Carbamidomethyl (C) _ENTNRLMQVWC(Carbamidomethyl (C))_ ENSG00000162298|ENST00000377190|SYVN1;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1 34.93206674587334 0.2904649469012649 2 {[QS]|[NT]}ENRPV 7 -1 60.882 0.0 0.0 4.1997 0.0 0.0 0.0 636.230847966948 636.230847966948 21.746972714976486 0.0 0.0 0.0 0 0.4247425010840047 1.0457574905606752 1.6307196863200843 1.416386562212267 {[QS]|[NT]}ENRPV 4.1997 - 4003 1 1.946 76570.4 0.6700000166893005 3739 3453 7182 DOHH2_400M_050219_2,7194 DOHH2_400M_050219_2,7194,ENTNRLMQVWC False False QSENPWDNKAVY 39.041353 725.8342 1121905.0 7182.0 ENSG00000162298|ENST00000377190|SYVN1;;ENST00000529207.5_1_11:64898917-64899817:-|nuORF;;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;;nc|ENSG00000162298|Q86TM6-2|SYVN1;;nc|ENSG00000162298|Q86TM6-3|SYVN1 7.378443082173665 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7195 39.05 429.0 321120.0 25 0 68007.0 -1 0 136 547.2818298076344 546.2745533410343 1 547.2826415896416 MULTI CID FTMS 0 0 0 7182 97255.890625 1.0 0 0.0 13 2 GE 2 -1 17.959 0.0 0.0 3.2875 0.0 0.0 0.0 357.1891268365844 357.1891268365844 4.859856381998782 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GE 3.2875 - 75 + 1 1.946 106724.8 1.0 3740 3453 7182 DOHH2_400M_050219_2,7195 DOHH2_400M_050219_2,7195, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7196 39.057 358.0 234400.0 25 0 13649.0 + 33372 SGKLKLSL 8 133 423.2750467125374 844.5355404918748 2 423.2744933962822 MULTI CID FTMS 0 0 0 7182 95715.859375 1.0 0 0.0 14 Unmodified _SGKLKLSL_ ENSG00000171566|ENST00000499023|PLRG1;nc|ENSG00000171566|O43660-2|PLRG1 33.4449034751529 0.3439576156054211 2 S[KG]{I|L}K{I|L}S{I|L} 8 0 + 37.573 0.0 0.0 4.449 4.449 71.586 0.0 0.0 0.0 1.38170855558851 4.300602357736665 1.38170855558851 1.38170855558851 0 1.548455006504028 0.0 0.3494850021680094 0.0 + + S[KG]{I|L}K{I|L}S{I|L};{[TV]|[{I|L}S]}[KG]K{I|L}S{I|L};[SG]K{I|L}K{I|L}S{I|L};[KG]S{I|L}K{I|L}S{I|L};[K{I|L}][SG]K{I|L}S{I|L} 4.449;4.2854;3.9397;3.5874;3.1214 +;-;+;-;- + 108 + 1 1.946 70534.9 1.0 3741 3453 7182 DOHH2_400M_050219_2,7196 DOHH2_400M_050219_2,7196,SGKLKLSL False True SGKLKLSL 39.056622 423.274493396282 733808.625 7182.0 ENSG00000171566|ENST00000499023|PLRG1;;nc|ENSG00000171566|O43660-2|PLRG1 2.0080795685450235 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7197 39.07 800.0 259570.0 25 0 35921.0 -1 0 105 904.9561939599467 0 904.9564086794852 PEAK CID FTMS 0 0 0 7182 83141.171875 0.6882053298377924 -1 0.0570945739746093 15 2 A{I|L}PN{I|L}{I|L}ESSEN{I|L}H{I|L} 14 -1 58.662 0.0 0.0 3.2448 0.0 0.0 66.0625821564184 208.0733431451781 274.13592530159656 0.0 0.0 0.0 0.0 0 1.048455006504028 0.0 0.0 0.4247425010840047 A{I|L}PN{I|L}{I|L}ESSEN{I|L}H{I|L} 3.2448 - 4030 + 1 1.946 139355.7 0.4699999988079071 3742 3453 7182 DOHH2_400M_050219_2,7197 DOHH2_400M_050219_2,7197, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7198 39.084 800.0 107770.0 25 0 5827.1 + 7106 EEMGDYIRSY 10 104 631.77030587795 1261.5260588227 2 633.3123657107353 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _EEMGDYIRSY_ ENSG00000125633|ENST00000376300|CCDC93 19.361941925380144 0.5226674314761524 2 [H{I|L}]{[CA]|SS}{I|L}Y 6 8 22.14 0.0 0.0 1.755 0.0 0.0 0.0 558.1493247741249 558.1493247741249 -0.7783248807594845 0.0 -0.7783248807594845 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]{[CA]|SS}{I|L}Y 1.755 - 518 1 1.946 69877.4 0.4600000083446502 3743 3453 7182 DOHH2_400M_050219_2,7198 DOHH2_400M_050219_2,7198,EEMGDYIRSY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7199 39.099 800.0 64352.0 25 0 5416.1 + -1 RTQCLREVWYQ 11 102 769.8828613162041 0 769.8828613162041 PEAK CID FTMS 0 0 0 -1 0 17 Carbamidomethyl (C) _RTQC(Carbamidomethyl (C))LREVWYQ_ REV__ENSG00000006611|ENST00000005226|USH1C 7.101721422024254 0.47618401536486 2 S{I|L}[TP]S[HM]V 8 -1 14.43 0.0 0.0 0.93837 0.0 0.0 458.2002186267456 224.104303228186 682.3045218549315 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.3494850021680094 0.0 S{I|L}[TP]S[HM]V 0.93837 - 130 + 1 1.946 40367.3 0.7599999904632568 3744 3453 7182 DOHH2_400M_050219_2,7199 DOHH2_400M_050219_2,7199,RTQCLREVWYQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7201 39.105 99.0 538570.0 25 0 91345.0 -1 LHLAVMLG 8 79 435.2510543401133 868.4875557470267 2 435.2512084841728 MULTI CID FTMS 0 0 0 7200 577689.1875 0.9565929741385332 5 -0.238525390625 1 Oxidation (M) _LHLAVM(Oxidation (M))LG_ ENSG00000118454|ENST00000370944|ANKRD13C;nc|ENSG00000118454|Q8N6S4-2|ANKRD13C 0.7936320650641473 0.8195151834710337 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.949 49172.9 1.0 3745 3454 7200 DOHH2_400M_050219_2,7201 DOHH2_400M_050219_2,7201,LHLAVMLG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7202 39.109 164.0 267080.0 25 0 19688.0 + 17969 KRHFQELY 8 87 560.797743956084 1119.580934978968 2 560.7982055544853 MULTI CID FTMS 0 0 0 7200 76293.1015625 0.1951875436125624 1 -0.0711669921875 2 Unmodified _KRHFQELY_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 23.1484247019978 0.5573009939494978 2 KE{I|L}Y 4 4 37.696 0.0 0.0 3.367 0.0 0.0 568.2856312482437 0.0 568.2856312482437 0.0 21.92085350219358 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.3807196863200844 KE{I|L}Y 3.367 - 266 1 1.949 39166.9 1.0 3746 3454 7200 DOHH2_400M_050219_2,7202 DOHH2_400M_050219_2,7202,KRHFQELY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7203 39.11 39.0 1249200.0 25 0 102850.0 + 37136 THLEKVMV 8 94 478.76458514501854 955.5146173568372 2 478.7653381228447 MULTI CID FTMS 0 0 0 7200 1138700.875 1.0 0 0.0 3 Unmodified _THLEKVMV_ REV__ENSG00000158683|ENST00000289672|PKD1L1;REV__nc|ENSG00000158683|Q8TDX9-2|PKD1L1 21.74664581756881 0.5868176546531598 2 {I|L}QKVVM 6 -1 40.182 0.0 0.0 4.2053 0.0 0.0 239.09092909980623 0.0 239.09092909980623 0.0 23.192672072328904 0.0 0.0 0 1.548455006504028 0.0 0.0 0.3807196863200844 {I|L}QKVVM 4.2053 - 152 1 1.949 40751.0 1.0 3747 3454 7200 DOHH2_400M_050219_2,7203 DOHH2_400M_050219_2,7203,THLEKVMV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7204 39.111 50.0 989080.0 25 0 171820.0 + 15777 ISEAGKDLLY 10 92 554.7974825844958 1107.5804122357915 2 554.7979614138603 MULTI CID FTMS 0 0 0 7200 952614.3125 0.9220838845612072 -1 0.1245155334472656 4 Unmodified _ISEAGKDLLY_ ENSG00000119397|ENST00000373855|CNTRL;ENST00000373851.6_1_9:123874787-123912836:+|nuORF;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 49.52724829834842 0.0829255630816734 2 {[TV]|[{I|L}S]}{[NV]|[RG]}AES{I|L}{I|L}Y 10 5 + 77.7 0.0 0.0 7.0153 7.0153 80.533 0.0 0.0 0.0 16.020599913279625 41.72598659335485 16.020599913279625 1.17931555708239 0 1.424742501084005 1.5228787452803376 1.360924374808178 0.0 {[TV]|[{I|L}S]}{[NV]|[RG]}AES{I|L}{I|L}Y;{[TV]|[{I|L}S]}{[NV]|[RG]}{I|L}AES{I|L}Y;{[TV]|[{I|L}S]}{[NV]|[RG]}AE{I|L}S{I|L}Y;{[TV]|[{I|L}S]}{[NV]|[RG]}A{I|L}ES{I|L}Y;{[TV]|[{I|L}S]}[NG]E{I|L}S{I|L}{I|L}Y;{[TV]|[{I|L}S]}[NG]{I|L}ES{I|L}{I|L}Y;{[TV]|[{I|L}S]}[NG]E{I|L}{I|L}S{I|L}Y;{[TV]|[{I|L}S]}[NG]{I|L}E{I|L}S{I|L}Y;{[TV]|[{I|L}S]}[NG]{I|L}{I|L}ES{I|L}Y;{[TV]|[{I|L}S]}[NG]ES{I|L}{I|L}{I|L}Y 7.0153;6.9088;6.7717;6.7498;6.5472;6.4717;6.3036;6.2281;6.2062;5.9817 -;-;-;-;-;-;-;-;-;- 431 1 1.949 43298.0 1.0 3748 3454 7200 DOHH2_400M_050219_2,7204 DOHH2_400M_050219_2,7204,ISEAGKDLLY True True ISEAGKDLLY 39.111067 554.79796141386 6060206.5 7200.0 ENST00000373851.6_1_9:123874787-123912836:+|nuORF;;nc|ENSG00000119397|Q7Z7A1-5|CNTRL;;ENSG00000119397|ENST00000373855|CNTRL 6.409969011942546 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7205 39.113 70.0 822110.0 25 0 37709.0 + 28997 QDWLNGKEY 9 106 576.7690441203932 1151.5235353075864 2 576.7697021365166 MULTI CID FTMS 0 0 0 7200 727388.125 1.0 0 0.0 5 Unmodified _QDWLNGKEY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 47.594388314883695 0.0456443387682827 2 [QA]ET{I|L}NY 7 6 31.991 0.0 0.0 2.7781 0.0 0.0 0.0 329.1461275690063 329.1461275690063 14.203379672125852 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.4247425010840047 [QA]ET{I|L}NY 2.7781 - 665 + 1 1.949 47547.5 1.0 3749 3454 7200 DOHH2_400M_050219_2,7205 DOHH2_400M_050219_2,7205,QDWLNGKEY True True QDWLNGKEY 39.112732 576.769702136517 3481805.0 7200.0 nc|ENSG00000211896|P01857|IGHG1;;nc|ENSG00000211892|P01861-1|IGHG4;;nc|ENSG00000211893|P01859|IGHG2;;nc|ENSG00000211897|P01860-1|IGHG3;;nc|ENSG00000211893|P01859-1|IGHG2;;nc|ENSG00000211892|P01861|IGHG4;;nc|ENSG00000211897|P01860|IGHG3;;nc|ENSG00000211896|P01857-1|IGHG1 7.627547264099121 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 7206 39.115 86.0 764960.0 25 0 70859.0 + 7107 EEMGDYIRSY 10 71 631.77030587795 1261.5260588227 2 631.7714721560478 MULTI CID FTMS 0 0 0 7200 688990.125 1.0 0 0.0 6 Unmodified _EEMGDYIRSY_ ENSG00000125633|ENST00000376300|CCDC93 43.9818466556824 0.1155196613165264 2 EEMGDY{I|L}RSY 10 0 + 78.894 0.0 0.0 6.2538 6.2538 92.816 0.0 0.0 0.0 64.20100967372576 13.521825181113629 13.521825181113629 29.45168783987789 0 0.5 1.6989700043360187 0.6549471895720985 0.0 + + EEMGDY{I|L}RSY;[HM]R{I|L}YDGM[HC];[HM]R{I|L}YDGC[HM];[HM]R{I|L}YDC(Carbamidomethyl (C))[HM];[AG][KA][YN]MHM[HC] 6.2538;3.9192;3.2843;2.4647;0.081619 +;-;-;-;- + 137 + 1 1.949 54188.2 1.0 3750 3454 7200 DOHH2_400M_050219_2,7206 DOHH2_400M_050219_2,7206,EEMGDYIRSY True True EEMGDYIRSY 39.114659 631.771472156048 4958328.5 7200.0 ENSG00000125633|ENST00000376300|CCDC93 8.214460531870523 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7207 39.117 129.0 727920.0 25 0 67892.0 16210 IVKNRTLPL 9 101 351.8973803369925 1052.6703116111776 3 351.8973571658134 MULTI CID FTMS 0 0 0 7200 616227.4375 1.0 0 0.0 7 Unmodified _IVKNRTLPL_ ENST00000559530.1_1_15:32058089-32058740:-|nuORF 20.453626601364224 0.2830276176381075 2 RT{I|L}P{I|L} 5 4 27.633 0.0 0.0 2.625 0.0 0.0 454.30208022285314 0.0 454.30208022285314 0.0 12.01544993495972 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.3252574989159953 + RT{I|L}P{I|L} 2.625 + + 132 1 1.949 90000.4 1.0 3751 3454 7200 DOHH2_400M_050219_2,7207 DOHH2_400M_050219_2,7207,IVKNRTLPL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7208 39.119 100.0 432400.0 25 0 44246.0 + 38579 TTDFPGNYSGY 11 72 611.2563810020872 1220.4982090709743 2 611.2568237185478 MULTI CID FTMS 0 0 0 7200 488552.0625 0.4105680919431657 -7 0.6520309448242188 8 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 43.77239144664712 0.1542841003880809 2 [YN][PG]S[DV]YSGY 11 7 [YN][PG]S[DV]Y + + 23.812 15.398 1.7197 1.951 1.951 47.416 0.0 0.0 0.0 0.0 3.36696871556164 0.0 0.0 0 0.0 0.0 0.0 0.0 [YN][PG]S[DV]YSGY 1.951 - 154 + 1 1.949 37343.5 1.0 3752 3454 7200 DOHH2_400M_050219_2,7208 DOHH2_400M_050219_2,7208,TTDFPGNYSGY False True TTDFPGNYSGY 39.119471 611.256823718548 77641431.0 7200.0 nc|ENSG00000171453|O15160-2|POLR1C;;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;;ENSG00000171453|ENST00000642195|POLR1C 8.755175590515137 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7209 39.122 138.0 740120.0 25 0 232990.0 + 30502 REFPDRLVGY 10 73 626.3275432768801 1250.64053362056 2 626.3278076052666 MULTI CID FTMS 0 0 0 7200 457365.78125 0.8457923985100901 -1 0.1245155334472656 9 Unmodified _REFPDRLVGY_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 31.461819360018414 0.2618065768826754 2 [VG]E{M(Oxidation (M))|F}[DP]{M(Oxidation (M))|F} 7 7 35.78 0.0 0.0 2.8609 0.0 0.0 0.0 456.2761629693969 456.2761629693969 9.810538213352942 0.0 0.0 0.0 0 1.5356668758921828 1.0457574905606752 0.0 0.0 [VG]E{M(Oxidation (M))|F}[DP]{M(Oxidation (M))|F} 2.8609 - 44 + 1 1.949 79065.4 1.0 3753 3454 7200 DOHH2_400M_050219_2,7209 DOHH2_400M_050219_2,7209,REFPDRLVGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7210 39.124 98.0 428200.0 25 0 72282.0 + 7732 ELDPNNAVYY 10 79 599.2747994978329 1196.5350460624657 2 599.2751342654228 MULTI CID FTMS 0 0 0 7200 441275.375 1.0 0 0.0 10 Unmodified _ELDPNNAVYY_ ENSG00000197860|ENST00000381007|SGTB 17.11289562659939 0.5604042439455784 2 [NP]NAVEEVYY 10 6 + 47.382 0.0 0.0 3.96 3.96 75.565 0.0 0.0 0.0 4.259687322722812 31.897737521010825 4.259687322722812 6.262874945799766 0 0.8182503180159344 0.0 0.4247425010840047 1.1307196863200843 [NP]NAVEEVYY;[NP]NAD{[QN]|[E{I|L}]|[KN]}VYY;[NP]GGAVEEVYY;[NP]GGAD{[QN]|[E{I|L}]|[KN]}VYY 3.96;3.4365;3.194;2.6706 -;-;-;- 78 1 1.949 35734.1 1.0 3754 3454 7200 DOHH2_400M_050219_2,7210 DOHH2_400M_050219_2,7210,ELDPNNAVYY False True ELDPNNAVYY 39.124396 599.275134265423 2451175.25 7200.0 ENSG00000197860|ENST00000381007|SGTB 3.146105527877808 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7211 39.127 123.0 605290.0 25 0 65578.0 + 25728 NIKPEIVSV 9 106 499.79737106460726 997.5801891960144 2 499.7975341677666 MULTI CID FTMS 0 0 0 7200 439552.28125 0.979482955235488 -1 0.1245155334472656 11 Unmodified _NIKPEIVSV_ ENSG00000131504|ENST00000389054|DIAPH1;nc|ENSG00000131504|O60610-2|DIAPH1;nc|ENSG00000131504|O60610-3|DIAPH1 45.69961567697781 0.0497987121815769 2 {[QV]|[N{I|L}]|[RA]|[KV]}K[EP]{I|L}VSV 9 0 + 49.944 0.0 0.0 5.0065 5.0065 78.805 0.0 0.0 0.0 5.541134294324124 9.889917747712644 5.541134294324124 5.541134294324124 0 1.1989700043360187 1.6989700043360187 0.0 0.6861818737241735 + + {[QV]|[N{I|L}]|[RA]|[KV]}K[EP]{I|L}VSV;[EP]{I|L}VKQVSV;[EP]{I|L}KVQVSV;[DP]{I|L}{I|L}KQVSV;[EP]{I|L}KN{I|L}VSV;[EP]{I|L}VK[AG]VSV;[EP]{I|L}KV[AG]VSV;[DP]{I|L}{I|L}K[AG]VSV;[EP]{I|L}KGG{I|L}VSV;[R{M(Oxidation (M))|F}]QK{[VA]|[{I|L}G]}{I|L}H 5.0065;4.4511;3.8475;3.824;3.5458;3.528;2.9245;2.9009;2.6227;2.5852 +;-;-;-;-;-;-;-;-;- + 456 1 1.949 60541.2 1.0 3755 3454 7200 DOHH2_400M_050219_2,7211 DOHH2_400M_050219_2,7211,NIKPEIVSV True True NIKPEIVSV 39.126928 499.797534167767 3335697.75 7200.0 nc|ENSG00000131504|O60610-3|DIAPH1;;nc|ENSG00000131504|O60610-2|DIAPH1;;ENSG00000131504|ENST00000389054|DIAPH1 5.19084374109904 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7212 39.133 333.0 459850.0 25 0 44451.0 + + 20169 DMLQREMM 8 128 527.3422042870964 1052.6698556409926 2 527.3427001833916 MULTI CID FTMS 0 0 0 7200 364244.125 1.0 0 0.0 12 Unmodified _LKRKAELVP_ nc|ENSG00000089876|Q7L7V1-2|DHX32;ENSG00000089876|ENST00000284690|DHX32 20.453626601364224 0.2830276176381075 2 [{I|L}T]KV 4 -1 37.99 0.0 0.0 3.6089 0.0 0.0 0.0 608.3524218325056 608.3524218325056 20.56654926303064 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.25 [{I|L}T]KV 3.6089 - 377 + 1 1.949 124296.2 1.0 3756 3454 7200 DOHH2_400M_050219_2,7212 DOHH2_400M_050219_2,7212,LKRKAELVP False False DMLQREMM 39.132972 527.342700183392 233125.1875 7200.0 nc|ENSG00000089876|Q7L7V1-2|DHX32;;ENSG00000089876|ENST00000284690|DHX32 2.452937642733256 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7213 39.135 117.0 662670.0 25 0 52196.0 + 5196 DIRPKISL 8 93 471.2923139077164 940.5700748822328 2 471.2928649783134 MULTI CID FTMS 0 0 0 7200 336458.3125 0.8955756508326109 -1 0.1245155334472656 13 Unmodified _DIRPKISL_ ENSG00000198919|ENST00000361582|DZIP3;ENST00000495008.5_1_3:108355483-108366962:+|nuORF 38.17557092003332 0.2648138137323925 2 D{I|L}R 3 5 42.167 0.0 0.0 4.4831 0.0 0.0 0.0 553.3344210260374 553.3344210260374 13.1259189508755 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + D{I|L}R 4.4831 + + 291 + 1 1.949 65000.9 1.0 3757 3454 7200 DOHH2_400M_050219_2,7213 DOHH2_400M_050219_2,7213,DIRPKISL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7214 39.139 157.0 291620.0 25 0 28343.0 + 39698 VEGFIPKNY 9 85 533.7820276895382 1065.5495024458762 2 533.7820312380791 MULTI CID FTMS 0 0 0 7200 269782.78125 1.0 0 0.0 14 Unmodified _VEGFIPKNY_ ENSG00000154016|ENST00000284154|GRAP;ENSG00000189152|ENST00000344415|GRAPL;ENST00000571380.1_1_17:18939269-18950305:-|nuORF;nc|ENSG00000189152|Q8TC17-2|GRAPL 46.020951573049366 0.0490941689151868 2 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{I|L}PKNY 9 0 + 57.56 0.0 0.0 5.4019 5.4019 86.996 0.0 0.0 0.0 44.79536541236652 14.099330555070395 14.099330555070395 12.460762528683702 0 0.6989700043360187 2.0 0.0 0.6747425010840047 + + {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{I|L}PKNY;{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{I|L}PKGGY 5.4019;4.2324 +;- + 105 + 1 1.949 42718.9 1.0 3758 3454 7200 DOHH2_400M_050219_2,7214 DOHH2_400M_050219_2,7214,VEGFIPKNY True True VEGFIPKNY 39.138521 533.782031238079 1425982.0 7200.0 ENSG00000189152|ENST00000344415|GRAPL;;ENST00000571380.1_1_17:18939269-18950305:-|nuORF;;ENSG00000154016|ENST00000284154|GRAP;;nc|ENSG00000189152|Q8TC17-2|GRAPL 7.132548014322917 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7215 39.142 195.0 255080.0 25 0 15346.0 + 583 AEIPQQVVGY 10 76 552.2898457377368 1102.5651385422734 2 552.2900268435478 MULTI CID FTMS 0 0 0 7200 231198.40625 0.6679515565660928 1 -0.0711669921875 15 Unmodified _AEIPQQVVGY_ ENSG00000085719|ENST00000517490|CPNE3 24.020572477871973 0.4289996903560794 2 [QP]QV[DV]VVGY 10 6 [QP]QV[DV]V + + 24.693 13.6 1.7769 2.2396 2.2396 47.672 0.0 0.0 0.0 0.0 9.340612801023408 0.0 0.0 0 0.0 0.0 0.0 0.0 [QP]QV[DV]VVGY 2.2396 - 92 + 1 1.949 46221.9 1.0 3759 3454 7200 DOHH2_400M_050219_2,7215 DOHH2_400M_050219_2,7215,AEIPQQVVGY False True AEIPQQVVGY 39.14228 552.290026843548 7617154.5 7200.0 ENSG00000085719|ENST00000517490|CPNE3 4.168791611989339 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7216 39.152 548.0 205710.0 25 0 12606.0 + 7584 EIKVKLIEA 9 147 521.8296434049352 1041.6447338766702 2 521.8292724490166 MULTI CID FTMS 0 0 0 7200 225181.875 1.0 0 0.0 16 Unmodified _EIKVKLIEA_ ENSG00000109805|ENST00000251496|NCAPG 43.77239144664712 0.0547478964384323 2 AK{I|L}{I|L}{M(Oxidation (M))|F}A 6 5 28.665 0.0 0.0 2.7519 0.0 0.0 380.233202049025 0.0 380.233202049025 0.0 1.5249472719554549 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 AK{I|L}{I|L}{M(Oxidation (M))|F}A 2.7519 - 374 1 1.949 89390.5 1.0 3760 3454 7200 DOHH2_400M_050219_2,7216 DOHH2_400M_050219_2,7216,EIKVKLIEA True True EIKVKLIEA 39.151915 521.829272449017 1171172.625 7200.0 ENSG00000109805|ENST00000251496|NCAPG 4.788067976633708 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7217 39.156 242.0 330230.0 25 0 29784.0 + 30505 REFPDRLVGY 10 77 417.8874137099507 1250.6404117300522 3 417.8874999880791 MULTI CID FTMS 0 0 0 7200 225188.109375 0.8851457685945825 -5 0.53375244140625 17 Unmodified _REFPDRLVGY_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 38.16057220495361 0.1769910087603572 2 {[RE]|[WV]}{M(Oxidation (M))|F}PDR{I|L}VGY 10 0 + 73.421 0.0 0.0 5.8707 5.8707 85.854 0.0 0.0 0.0 5.764837301042718 62.45235939505172 5.764837301042718 9.164539485499247 0 2.1237125054200234 0.0 0.0 1.1549471895720984 + + {[RE]|[WV]}{M(Oxidation (M))|F}PDR{I|L}VGY;{[RE]|[WV]}{M(Oxidation (M))|F}PD[VG]{I|L}VGY;{[RE]|[WV]}{M(Oxidation (M))|F}PD[VG]{I|L}RY;[TA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PDR{I|L}VGY;[TA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PDR{I|L}RY;{[RE]|[WV]}TEER{I|L}RY;{[RE]|[WV]}{M(Oxidation (M))|F}PD[K{I|L}]V[{M(Oxidation (M))|F}T] 5.8707;5.1379;4.5938;4.5459;4.0018;3.948;2.1359 +;-;-;-;-;-;- + 150 1 1.949 67655.1 1.0 3761 3454 7200 DOHH2_400M_050219_2,7217 DOHH2_400M_050219_2,7217,REFPDRLVGY False True REFPDRLVGY 39.15643 417.887499988079 30319301.0 7200.0 nc|ENSG00000151348|Q93063-3|EXT2;;ENSG00000151348|ENST00000533608|EXT2;;nc|ENSG00000151348|Q93063-2|EXT2;;ENST00000528159.1_1_11:44228449-44265767:+|nuORF 9.758681933085125 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7218 39.161 251.0 328010.0 25 0 54970.0 + 11129 GEIDPLNRRF 10 93 406.2194096128528 1215.6363994387584 3 406.2193481326103 MULTI CID FTMS 0 0 0 7200 215644.59375 1.0 0 0.0 18 Unmodified _GEIDPLNRRF_ ENSG00000044446|ENST00000379942|PHKA2;ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1 12.240655878213236 0.6421556946785427 2 {[DA]|[EG]}{I|L}D{M(Oxidation (M))|F} 5 5 46.026 0.0 0.0 3.7861 0.0 0.0 0.0 651.369950507225 651.369950507225 35.05658422928384 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[DA]|[EG]}{I|L}D{M(Oxidation (M))|F} 3.7861 - 108 + 1 1.949 70367.8 1.0 3762 3454 7200 DOHH2_400M_050219_2,7218 DOHH2_400M_050219_2,7218,GEIDPLNRRF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7219 39.168 334.0 250160.0 25 0 25230.0 + + 42933 ADVVVSRW 8 113 466.2530564790289 930.4915600248578 2 466.2530700564384 MULTI CID FTMS 0 0 0 7200 206927.046875 1.0 0 0.0 19 Unmodified _VVSAMTRAP_ ENSG00000169710|ENST00000306749|FASN 18.13498045792455 0.3457906370836843 2 {[DA]|[EG]}VVWV{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 + 59.026 0.0 0.0 6.3435 6.3435 89.446 0.0 0.0 0.0 40.24057189675089 9.155852772434642 9.155852772434642 9.273174902439573 0 1.3494850021680094 1.0969100130080565 0.5176452685714268 0.0 {[DA]|[EG]}VVWV{[QD]|[EN]|[WG]|[KD]|[RS]};{[DA]|[EG]}VVVW{[QD]|[EN]|[WG]|[KD]|[RS]};{[DA]|[EG]}VWVV{[QD]|[EN]|[WG]|[KD]|[RS]};{[DA]|[EG]}VVV[QT]S{I|L};{[DA]|[EG]}VVV[C(Carbamidomethyl (C))R]{I|L};{[DA]|[EG]}V{[DA]|[EG]}VV{[QD]|[EN]|[WG]|[KD]|[RS]};{[DA]|[EG]}VW[Q{I|L}]S{I|L};{[DA]|[EG]}V[R{M(Oxidation (M))|F}]R[PA];WV{[DA]|[EG]}[Q{I|L}]S{I|L} 6.3435;5.3469;5.0508;4.6856;4.4931;4.0554;3.3436;2.4603;2.1648 -;-;-;-;-;-;-;-;- 177 + 1 1.949 68429.6 1.0 3763 3454 7200 DOHH2_400M_050219_2,7219 DOHH2_400M_050219_2,7219,VVSAMTRAP False False ADVVVSRW 39.168309 466.253070056438 944104.75 7200.0 ENSG00000169710|ENST00000306749|FASN 2.23390261332194 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7220 39.17 102.0 609030.0 25 0 62259.0 + 26081 NPASKVIAL 9 112 456.7790204591876 911.5434879851751 2 456.7787353396416 MULTI CID FTMS 0 0 0 7200 190964.421875 0.2792287017604464 -4 0.424407958984375 20 Unmodified _NPASKVIAL_ ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC 32.30548876998284 0.1201446275138228 2 [NP]A 3 6 29.169 0.0 0.0 3.2 0.0 0.0 0.0 626.3868467100377 626.3868467100377 12.971062485323516 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.7742275032520141 + [NP]A 3.2 + + 46 1 1.949 50612.0 1.0 3764 3454 7200 DOHH2_400M_050219_2,7220 DOHH2_400M_050219_2,7220,NPASKVIAL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7222 39.175 85.0 629990.0 25 0 56012.0 + 18011 KSDVHLNFY 9 79 561.7819784042864 1121.5494038753727 2 561.7812377810478 MULTI CID FTMS 0 0 0 7221 525375.3125 0.4740927581161688 -2 0.1956825256347656 1 Unmodified _KSDVHLNFY_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 61.60191391372663 0.0251951588191061 2 SK{I|L}N{M(Oxidation (M))|F}Y 6 4 56.045 0.0 0.0 4.9971 0.0 0.0 351.1538563459 0.0 351.1538563459 0.0 38.56594299929293 0.0 0.0 0 0.9247425010840048 0.0 0.2742275032520141 0.7134679910804405 SK{I|L}N{M(Oxidation (M))|F}Y 4.9971 - 379 1 1.949 46463.7 1.0 3765 3455 7221 DOHH2_400M_050219_2,7222 DOHH2_400M_050219_2,7222,KSDVHLNFY True True KSDVHLNFY 39.175273 561.781237781048 12494215.0 7221.0 ENSG00000071794|ENST00000310053|HLTF;;nc|ENSG00000071794|Q14527-2|HLTF 8.071070988972982 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7223 39.189 800.0 111570.0 25 0 8256.3 + 43438 WSDYSDNLKY 10 129 645.7849425704994 1289.5553322077988 2 645.7850829958916 MULTI CID FTMS 0 0 0 7221 99957.3125 0.6181163401393173 1 -0.0554084777832031 2 Unmodified _WSDYSDNLKY_ ENSG00000196150|ENST00000417550|ZNF250;nc|ENSG00000196150|P15622-2|ZNF250;nc|ENSG00000196150|P15622|ZNF250 37.07464296494664 0.1884581770199685 2 WSDYSD{[QV]|[N{I|L}]|[RA]|[KV]}KY 10 0 + 68.426 0.0 0.0 5.3062 5.3062 87.622 0.0 0.0 0.0 57.10007458970934 12.64136888583522 12.64136888583522 16.15423952885945 0 0.7614393726401688 1.154901959985743 0.0 0.2887254899964357 + + WSDYSD{[QV]|[N{I|L}]|[RA]|[KV]}KY;WSDY[MN][PS]KY;WSDYS{[SA]|[TG]}[PS]KY;WSDY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}RR{M(Oxidation (M))|F};WSDYS{[CA]|SS}RR{M(Oxidation (M))|F};WSDY[TP]YYVP;[VG]A[H{I|L}]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YDS[PA];[VG]A[H{I|L}]{[CA]|SS}SYDS[PA];{[QV]|[N{I|L}]|[RA]|[KV]}[H{I|L}]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YDS[PA];{[QV]|[N{I|L}]|[RA]|[KV]}[H{I|L}]{[CA]|SS}SYDS[PA] 5.3062;4.0535;3.7879;3.4303;3.1614;2.678;2.0357;1.7753;1.2465;0.98377 +;-;-;-;-;-;-;-;-;- + 319 + 1 1.949 72433.4 0.7400000095367432 3766 3455 7221 DOHH2_400M_050219_2,7223 DOHH2_400M_050219_2,7223,WSDYSDNLKY False True WSDYSDNLKY 39.189111 645.785082995892 808722.0625 7221.0 nc|ENSG00000196150|P15622-2|ZNF250;;ENSG00000196150|ENST00000417550|ZNF250;;nc|ENSG00000196150|P15622|ZNF250 7.66292158762614 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7224 39.19 46.0 1544000.0 25 0 132220.0 + 16234 IVNRLLPSA 9 91 491.8056145371911 981.596676141182 2 491.8058349490166 MULTI CID FTMS 0 0 0 7221 998773.625 0.551833366012054 -2 0.1956825256347656 3 Unmodified _IVNRLLPSA_ REV__ENSG00000222018|ENST00000410005|C21orf140 39.957323273325 0.0756908302845263 2 V{I|L}C(Carbamidomethyl (C)){I|L}[K{I|L}]AD 8 -1 50.558 0.0 0.0 5.1505 0.0 0.0 0.0 66.03570734195546 66.03570734195546 36.26078152608656 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5242275032520141 0.0 V{I|L}C(Carbamidomethyl (C)){I|L}[K{I|L}]AD 5.1505 - 278 + 1 1.949 57267.1 1.0 3767 3455 7221 DOHH2_400M_050219_2,7224 DOHH2_400M_050219_2,7224,IVNRLLPSA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7225 39.194 178.0 518110.0 25 0 44699.0 + 33117 SESSIDRLM 9 107 519.2505645369384 1036.4865761406768 2 519.2508422732353 MULTI CID FTMS 0 0 0 7221 260065.953125 1.0 0 0.0 4 Unmodified _SESSIDRLM_ ENSG00000181789|ENST00000314797|COPG1 34.93206674587334 0.1032771302489716 2 {[ES]|[DT]|[{I|L}C]}SS{I|L}DR{I|L}M 9 0 + 41.832 0.0 0.0 4.036 4.036 83.834 0.0 0.0 0.0 28.64471023598732 2.931372718143664 2.931372718143664 22.92751353989288 0 1.0172203223519531 0.0 0.4247425010840047 0.0 + + {[ES]|[DT]|[{I|L}C]}SS{I|L}DR{I|L}M;{[ES]|[DT]|[{I|L}C]}S[RV]{I|L}M{[ES]|[DT]|[{I|L}C]};{[MG]|[TS]}D[RV]{I|L}M{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}SVVG{I|L}M{[ES]|[DT]|[{I|L}C]};{[MG]|[TS]}DVVG{I|L}M{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}{[WT]|[RM]}DR{I|L}M;{[ES]|[DT]|[{I|L}C]}S[{I|L}T][RP]T{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}SVV{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[MG]|[TS]}DVV{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[CA]|SS}E[RV]{I|L}M{[ES]|[DT]|[{I|L}C]} 4.036;1.8239;1.7419;1.7034;1.6214;1.5552;1.2892;0.22891;0.14692;0.02451 +;-;-;-;-;-;-;-;-;- + 179 + 1 1.949 73737.9 1.0 3768 3455 7221 DOHH2_400M_050219_2,7225 DOHH2_400M_050219_2,7225,SESSIDRLM True True SESSIDRLM 39.193808 519.250842273235 3762410.5 7221.0 ENSG00000181789|ENST00000314797|COPG1 6.07414452234904 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7226 39.2 312.0 227640.0 25 0 16523.0 + 413 AEEKAIVQQW 10 101 601.3140682608932 1200.6135835885864 2 601.3140746951103 MULTI CID FTMS 0 0 0 7221 243693.703125 1.0 0 0.0 5 Unmodified _AEEKAIVQQW_ ENSG00000124802|ENST00000379715|EEF1E1;nc|ENSG00000124802|O43324-2|EEF1E1 49.52724829834842 0.0829255630816734 2 [AG]V{[ET]|[MV]}A{I|L}VQQW 11 3 + 60.75 0.0 0.0 5.0599 5.0599 74.679 0.0 0.0 0.0 1.804560644581308 9.128498242810998 1.804560644581308 1.804560644581308 0 0.805462187404089 1.5228787452803376 0.4247425010840047 0.4247425010840047 [AG]V{[ET]|[MV]}A{I|L}VQQW;{[CP]|[EA]}EKA{I|L}VQQW;[AG]V{[ET]|[MV]}AV{I|L}QQW;{[CP]|[EA]}EKAV{I|L}QQW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[DG]{I|L}VQQW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CP]|[EA]}A{I|L}VQQW;{[QV]|[N{I|L}]|[RA]|[KV]}{[ET]|[MV]}A{I|L}VQQW;[AG]V{[ET]|[MV]}A{I|L}VQ[AG]W;{[CP]|[EA]}EKA{I|L}V[AG]QW;{[CP]|[EA]}EKA{I|L}VQ[AG]W 5.0599;4.9096;4.6625;4.5122;4.4601;4.3794;4.3274;4.2996;4.1463;4.1463 -;+;-;-;-;-;-;-;-;- + 716 1 1.949 56360.5 1.0 3769 3455 7221 DOHH2_400M_050219_2,7226 DOHH2_400M_050219_2,7226,AEEKAIVQQW True True AEEKAIVQQW 39.199513 601.31407469511 2071960.375 7221.0 ENSG00000124802|ENST00000379715|EEF1E1;;nc|ENSG00000124802|O43324-2|EEF1E1 7.441522439320882 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7227 39.206 338.0 299570.0 25 0 25851.0 + + 6362 DVQKKLMSL 9 130 531.3019643459801 0 531.3043090701103 PEAK CID FTMS 0 0 0 7221 222660.84375 0.2702427765501318 9 -0.6484870910644531 6 Unmodified _DVRVFVDVL_ nc|ENSG00000100815|Q15643-2|TRIP11;ENSG00000100815|ENST00000267622|TRIP11 37.97399986684836 0.0716774499419844 2 VQKK{I|L}MS 7 -1 42.138 0.0 0.0 3.9731 0.0 0.0 115.0214106831656 128.07203088931877 243.0934415724844 0.0 0.0 0.0 0.0 0 2.128144697160131 0.0 0.8901668265424344 0.5 VQKK{I|L}MS 3.9731 - 340 + 1 1.949 82014.5 1.0 3770 3455 7221 DOHH2_400M_050219_2,7227 DOHH2_400M_050219_2,7227,DVRVFVDVL False False DVQKKLMSL 39.205652 531.30430907011 1530663.125 7221.0 nc|ENSG00000100815|Q15643-2|TRIP11;;ENSG00000100815|ENST00000267622|TRIP11 6.862038771311442 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7228 39.211 300.0 277280.0 25 0 27656.0 + 18573 LAARLAELL 9 122 485.3078680666691 968.6011832001382 2 485.3082153201103 MULTI CID FTMS 0 0 0 7221 117377.8671875 1.0 0 0.0 7 Unmodified _LAARLAELL_ REV__ENSG00000107719|ENST00000263563|PALD1 11.640296217721598 0.521594087909532 2 [PA][PS][RV]V{I|L} 8 -1 20.449 0.0 0.0 2.1112 0.0 0.0 0.0 146.08331467996246 146.08331467996246 7.261584145730637 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3807196863200844 0.3252574989159953 [PA][PS][RV]V{I|L} 2.1112 - 402 1 1.949 66562.2 1.0 3771 3455 7221 DOHH2_400M_050219_2,7228 DOHH2_400M_050219_2,7228,LAARLAELL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7229 39.218 358.0 221960.0 25 0 14870.0 + 24543 MLAKHVITL 9 111 513.3126921676675 1024.6108314021349 2 513.3131591677666 MULTI CID FTMS 0 0 0 7221 90139.2421875 0.6166295977768927 -1 0.0711669921875 8 Unmodified _MLAKHVITL_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 46.020951573049366 0.0490941689151868 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KA]HV{I|L}T{I|L} 9 0 + 40.713 0.0 0.0 3.9735 3.9735 83.999 0.0 0.0 0.0 20.83113812663257 26.10908374628002 20.83113812663257 26.49288766643714 0 1.0317183090963749 2.0 0.3494850021680094 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KA]HV{I|L}T{I|L};[HV][KA]{I|L}M{I|L}T{I|L};[KA][HV]{I|L}M{I|L}T{I|L};[HV]{I|L}[KC]V{I|L}T{I|L};[HV][KA]{I|L}{I|L}MT{I|L};[KA][HV]{I|L}{I|L}MT{I|L};[HV]{I|L}[KA]M{I|L}T{I|L};[VP]{[TV]|[{I|L}S]}[PS]V{I|L}T{I|L};[HV]{I|L}[KA]{I|L}MT{I|L};[HV][KA]{I|L}T{I|L}M{I|L} 3.9735;1.3879;1.144;0.98755;0.92221;0.67834;0.62841;0.38528;0.16275;0.12362 +;-;-;-;-;-;-;-;-;- + 185 1 1.949 67907.6 1.0 3772 3455 7221 DOHH2_400M_050219_2,7229 DOHH2_400M_050219_2,7229,MLAKHVITL True True MLAKHVITL 39.217592 513.313159167767 801253.375 7221.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 3.0435354709625244 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7230 39.226 468.0 165810.0 25 0 12309.0 + 13830 HTVDELKLY 9 116 559.2981753258174 0 559.2941772341728 PEAK CID FTMS 0 0 0 7221 99876.3359375 0.1443429237595933 4 -0.1673583984375 9 Unmodified _HTVDELKLY_ REV__ENSG00000151151|ENST00000373935|IPMK 10.150570793230772 0.310544096262648 2 {I|L}D{I|L} 3 -1 11.198 0.0 0.0 1.0029 0.0 0.0 258.1006708647222 514.2627657525999 772.3634366173221 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D{I|L} 1.0029 - 159 + 1 1.949 63011.2 1.0 3773 3455 7221 DOHH2_400M_050219_2,7230 DOHH2_400M_050219_2,7230,HTVDELKLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7232 39.231 41.0 952380.0 25 0 118660.0 -1 0 44 603.9673254404012 1808.880146921404 3 603.9699584841728 MULTI CID FTMS 0 0 0 7231 850900.6875 0.4067516889664271 -4 0.3081855773925781 1 2 DYE{[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}{I|L}Q 9 -1 30.34 0.0 0.0 1.6773 0.0 0.0 713.3875737693223 0.0 713.3875737693223 0.0 23.35016244829767 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 DYE{[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}{I|L}Q 1.6773 - 87 + 1 1.949 37186.4 1.0 3774 3456 7231 DOHH2_400M_050219_2,7232 DOHH2_400M_050219_2,7232, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7233 39.233 134.0 444970.0 25 0 41397.0 + 32889 SEIGKAVGF 9 89 454.2474158620934 906.4802787909867 2 454.2476379275322 MULTI CID FTMS 0 0 0 7231 322119.8125 0.2605646406369487 3 -0.1119499206542968 2 Unmodified _SEIGKAVGF_ ENSG00000092853|ENST00000318121|CLSPN;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN 16.942295170755138 0.3780752226737986 2 [KG]{I|L}G{I|L}G 6 6 19.842 0.0 0.0 2.1889 0.0 0.0 0.0 378.13265851194313 378.13265851194313 3.912486963465213 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 [KG]{I|L}G{I|L}G 2.1889 - 244 1 1.949 49122.3 1.0 3775 3456 7231 DOHH2_400M_050219_2,7233 DOHH2_400M_050219_2,7233,SEIGKAVGF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7234 39.235 88.0 555520.0 25 0 72031.0 + 9843 FPENKKQPY 9 74 575.7994555006755 1149.584358068151 2 575.7999755740166 MULTI CID FTMS 0 0 0 7231 324224.15625 0.0104868069899808 13 -1.0935897827148438 3 Unmodified _FPENKKQPY_ ENSG00000051382|ENST00000674063|PIK3CB;ENST00000481749.5_1_3:138374233-138426144:-|nuORF 34.10243960390752 0.1078313939113124 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{[DS]|[MA]|[CV]|TT}Q 6 5 38.275 0.0 0.0 3.3295 0.0 0.0 0.0 443.2254732721313 443.2254732721313 15.316206019771528 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3252574989159953 0.7614393726401688 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{[DS]|[MA]|[CV]|TT}Q 3.3295 - 74 + 1 1.949 45220.6 1.0 3776 3456 7231 DOHH2_400M_050219_2,7234 DOHH2_400M_050219_2,7234,FPENKKQPY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7235 39.239 166.0 457450.0 25 0 52641.0 + 40565 VKGKSGSG 8 112 360.2060064383613 718.3974599435227 2 360.2067138552666 MULTI CID FTMS 0 0 0 7231 315986.3125 0.1634303406829744 4 -0.1742019653320312 4 Unmodified _VKGKSGSG_ REV__ENST00000473395.1_1_2:198365100-198366019:+|nuORF 0.0 0.8243325171867699 2 Y 1 -1 6.9897 0.0 0.0 0.97296 0.0 0.0 196.20588387106017 356.09473544178576 552.3006193128459 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.97296 - 3 + 1 1.949 66154.1 1.0 3777 3456 7231 DOHH2_400M_050219_2,7235 DOHH2_400M_050219_2,7235,VKGKSGSG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7236 39.252 800.0 206470.0 25 0 21448.0 327 AEAFAALIDMM 11 139 591.7806742985457 1181.546795663891 2 591.7805663943291 MULTI CID FTMS 0 0 0 7231 85403.125 0.8939503953863537 -1 0.0554084777832031 5 Unmodified _AEAFAALIDMM_ ENSG00000168795|ENST00000307750|ZBTB5 12.240655878213236 0.7805268987462184 2 {NN|[MP]|[D{I|L}]|[EV]}RD 4 9 24.641 0.0 0.0 2.0855 0.0 0.0 0.0 679.2848382266444 679.2848382266444 3.672137691284405 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}RD 2.0855 - 534 1 1.949 125729.4 0.550000011920929 3778 3456 7231 DOHH2_400M_050219_2,7236 DOHH2_400M_050219_2,7236,AEAFAALIDMM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7237 39.261 473.0 206760.0 25 0 11893.0 + 6611 EAQWGALHQ 9 148 520.2509928757277 1038.4874328182552 2 521.2544433474541 MULTI CID FTMS 0 0 0 7231 128124.75 0.3826805179861594 3 -0.1119499206542968 6 Unmodified _EAQWGALHQ_ REV__nc|ENSG00000078618|O43847-2|NRDC 20.453626601364224 0.2830276176381075 2 {[QN]|[E{I|L}]|[KN]}K[C(Carbamidomethyl (C))Q]P[HQ] 8 -1 + 24.855 0.0 0.0 2.3934 2.3934 72.993 0.0 0.0 0.0 0.6302304249898327 4.665762445130497 0.6302304249898327 7.116069873417704 0 0.0 1.5228787452803376 0.3494850021680094 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}K[C(Carbamidomethyl (C))Q]P[HQ];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NHE{I|L}PW;{[QN]|[E{I|L}]|[KN]}[QP][C(Carbamidomethyl (C))K][HQ];[TA]QPNM{I|L}[HQ];[TA]QPN{M(Oxidation (M))|F}P[HQ];[VP][NS]NM{I|L}[HQ];[VP][NS]N{M(Oxidation (M))|F}P[HQ];[TA]WHE{I|L}PW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGHE{I|L}PW;{[CT]|[{M(Oxidation (M))|F}G]}[YQ]{M(Oxidation (M))|F}{I|L}[HQ] 2.3934;1.7082;1.6711;1.5882;1.3966;1.1626;0.97104;0.96323;0.81629;0.80171 -;-;-;-;-;-;-;-;-;- 379 1 1.949 84472.7 1.0 3779 3456 7231 DOHH2_400M_050219_2,7237 DOHH2_400M_050219_2,7237,EAQWGALHQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7239 39.27 345.0 219840.0 25 0 25528.0 + 9748 FMKPGKVVL 9 118 509.8092540288391 1017.603955124478 2 509.8096496462822 MULTI CID FTMS 0 0 0 7238 141128.484375 0.1136791822107447 5 -0.3226890563964844 1 Unmodified _FMKPGKVVL_ ENSG00000131469|ENST00000253788|RPL27;ENST00000587478.1_1_17:41150475-41150953:+|nuORF;ENST00000593262.1_1_17:41150683-41150953:+|nuORF 28.486842064014134 0.1687311288560894 2 KVVPGG 6 7 18.805 0.0 0.0 1.8479 0.0 0.0 409.2039724009431 68.05128656558827 477.25525896653136 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KVVPGG 1.8479 - 199 + 1 1.949 63405.9 1.0 3780 3457 7238 DOHH2_400M_050219_2,7239 DOHH2_400M_050219_2,7239,FMKPGKVVL False True FMKPGKVVL 39.269596 509.809649646282 35914725.0 7238.0 ENSG00000131469|ENST00000253788|RPL27;;ENST00000593262.1_1_17:41150683-41150953:+|nuORF;;ENST00000587478.1_1_17:41150475-41150953:+|nuORF 4.909448305765788 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7240 39.273 164.0 263600.0 25 0 22019.0 -1 NCKEEIASI 9 85 532.2564563494691 1062.498359765738 2 532.2581664919853 MULTI CID FTMS 0 0 0 7238 179595.421875 0.9673023053290674 -1 0.0349349975585937 2 Carbamidomethyl (C) _NC(Carbamidomethyl (C))KEEIASI_ ENSG00000029725|ENST00000537505|RABEP1;ENST00000575475.2_1_17:5185712-5281605:+|nuORF;nc|ENSG00000029725|Q15276-2|RABEP1 43.77239144664712 0.0547478964384323 2 [DV][WM]E{I|L}AS{I|L} 9 -1 + 63.75 0.0 0.0 6.0 6.0 90.549 0.0 0.0 0.0 3.467466663803016 47.27207371400709 3.467466663803016 17.30622673923861 0 1.424742501084005 1.5228787452803376 1.2302046884880935 0.0 [DV][WM]E{I|L}AS{I|L};[VS][PG]C(Carbamidomethyl (C))C(Carbamidomethyl (C)){I|L}AS{I|L};[DV][WM]ES[{I|L}A]{I|L} 6;4.3712;3.4064 -;-;- 73 1 1.949 39655.5 1.0 3781 3457 7238 DOHH2_400M_050219_2,7240 DOHH2_400M_050219_2,7240,NCKEEIASI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7241 39.282 501.0 303220.0 25 0 16374.0 41245 VPGKPAAP 8 214 368.7202646534795 735.425976373759 2 368.7196227908134 MULTI CID FTMS 0 0 0 7238 121443.90625 0.1547482550725164 5 -0.3226890563964844 3 Unmodified _VPGKPAAP_ ENSG00000185504|ENST00000327787|FAAP100;nc|ENSG00000185504|Q0VG06-3|FAAP100 0.0 0.8243325171867699 2 W 1 8 12.764 0.0 0.0 1.7356 0.0 0.0 531.3369698813747 0.0 531.3369698813747 0.0 0.2013159000862785 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.7356 - 27 + 1 1.949 118549.2 1.0 3782 3457 7238 DOHH2_400M_050219_2,7241 DOHH2_400M_050219_2,7241,VPGKPAAP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7242 39.294 683.0 215150.0 25 0 18354.0 + 783 AESKAVQEL 9 151 487.7616358736374 0 487.7622253298759 PEAK CID FTMS 0 0 0 7238 99831.4375 0.8005101845848329 1 -0.0327186584472656 4 Unmodified _AESKAVQEL_ ENSG00000169994|ENST00000409816|MYO7B;ENST00000496841.5_1_2:128377972-128392002:+|nuORF;nc|ENSG00000169994|Q6PIF6-2|MYO7B;nc|ENSG00000169994|Q6PIF6|MYO7B 36.12702656103203 0.0807574182900477 2 {I|L}NQ 3 8 10.177 0.0 0.0 1.0454 0.0 0.0 200.08960367911223 415.1980379693969 615.2876416485092 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}NQ 1.0454 - 87 + 1 1.949 116292.7 1.0 3783 3457 7238 DOHH2_400M_050219_2,7242 DOHH2_400M_050219_2,7242,AESKAVQEL True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7244 39.299 76.0 724830.0 25 0 75402.0 + 433 AEEPLAGRTW 10 71 565.2851966450795 1128.555840356959 2 565.2855102419853 MULTI CID FTMS 0 0 0 7243 553088.9375 0.4824923461365164 4 -0.2899703979492187 1 Unmodified _AEEPLAGRTW_ ENST00000529704.5_1_11:67119307-67120167:-|nuORF;ENST00000534515.1_1_11:67119307-67119526:-|nuORF 32.037481411007896 0.2488723560272515 2 {[CP]|[EA]}EP{I|L}A[WK]W 9 3 + 47.101 0.0 0.0 4.1735 4.1735 69.097 0.0 0.0 0.0 34.336565238925765 4.436974992327123 4.436974992327123 0.4575749056067479 0 1.0 0.0 0.4247425010840047 0.0 {[CP]|[EA]}EP{I|L}A[WK]W;{[CP]|[EA]}EP{I|L}A{[NV]|[RG]}TW;{[MS]|[{M(Oxidation (M))|F}A]}[HA]{I|L}A[WK]W;{[MS]|[{M(Oxidation (M))|F}A]}[HA]{I|L}A{[NV]|[RG]}TW 4.1735;4.133;1.2496;1.2091 -;+;-;- + 67 + 1 1.96 51202.1 1.0 3784 3458 7243 DOHH2_400M_050219_2,7244 DOHH2_400M_050219_2,7244,AEEPLAGRTW False True AEEPLAGRTW 39.299185 565.285510241985 31869608.0 7243.0 ENST00000534515.1_1_11:67119307-67119526:-|nuORF;;ENST00000529704.5_1_11:67119307-67120167:-|nuORF 7.2052585283915205 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7245 39.313 800.0 61699.0 25 0 4530.5 -1 0 87 988.4529784105956 2962.337105831987 3 989.1272460818292 MULTI CID FTMS 0 0 0 7243 99243.1015625 0.8118787575729861 1 -0.0442962646484375 2 2 [NP]{I|L}N{M(Oxidation (M))|F} 5 -1 9.0411 0.0 0.0 0.3052 0.0 0.0 0.0 2374.063399127162 2374.063399127162 4.436974992327121 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}N{M(Oxidation (M))|F} 0.3052 - 59 1 1.96 44860.3 0.5600000023841858 3785 3458 7243 DOHH2_400M_050219_2,7245 DOHH2_400M_050219_2,7245, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7246 39.322 525.0 216090.0 25 0 29299.0 + 35251 SSEQTFMYY 9 148 586.233788527575 1170.45302412195 2 586.2343017458916 MULTI CID FTMS 0 0 0 7243 118303.2109375 0.3476046451560299 -3 0.1230621337890625 3 Oxidation (M) _SSEQTFM(Oxidation (M))YY_ ENSG00000115758|ENST00000234111|ODC1 56.17704186161178 0.0281986971544335 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TH{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY 8 5 + 41.401 0.0 0.0 3.5372 3.5372 67.017 0.0 0.0 0.0 0.4011506781246723 2.5705241048641625 0.4011506781246723 0.4011506781246723 0 1.242992819099939 0.0 1.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TH{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SST{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY;[AG]ESST{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY;{[ET]|[MV]}NST{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY;{[ES]|[DT]|[{I|L}C]}QST{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY;{[CA]|SS}EQT{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HT{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY;{[ES]|[DT]|[{I|L}C]}SQT{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY;{[QS]|[NT]}EST{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY;[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY 3.5372;3.5029;3.2364;3.0833;3.0148;2.8185;2.8152;2.6486;2.6328;2.558 -;-;-;-;-;+;-;-;-;- + 1601 1 1.96 88917.1 1.0 3786 3458 7243 DOHH2_400M_050219_2,7246 DOHH2_400M_050219_2,7246,SSEQTFMYY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7247 39.336 800.0 188570.0 25 0 24418.0 + + 30590 KANHAELIL 9 159 504.7954976473632 1007.5764423615263 2 504.7953369021416 MULTI CID FTMS 0 0 0 7243 104604.578125 1.0 0 0.0 4 Unmodified _REVHELLL_ ENSG00000104549|ENST00000265896|SQLE 48.345845343767074 0.1470278396477103 2 {[QN]|[E{I|L}]|[KN]}[HA]AE{I|L}{I|L}{I|L} 9 -1 + 58.92 0.0 0.0 5.8477 5.8477 81.754 0.0 0.0 0.0 5.708632092071902 14.97302484056646 5.708632092071902 5.017346757967545 0 0.8252574989159953 1.154901959985743 0.9386218330464624 1.1861818737241734 {[QN]|[E{I|L}]|[KN]}[HA]AE{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HA]NAK{I|L}{I|L};[{I|L}P][RH]{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HA]ANK{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[YV]MK{I|L}{I|L};{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}MK{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HA]GGAK{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HA]AGGK{I|L}{I|L};[VP]Y[YQ]{I|L}{I|L}{I|L};[KS][C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}{I|L}{I|L}{I|L} 5.8477;5.3497;5.2811;5.1711;5.0089;4.4602;4.4358;4.2572;3.5441;3.3623 -;-;-;-;-;-;-;-;-;- 477 1 1.96 114213.9 0.5199999809265137 3787 3458 7243 DOHH2_400M_050219_2,7247 DOHH2_400M_050219_2,7247,REVHELLL False False KANHAELIL 39.336108 504.795336902142 541830.625 7243.0 ENSG00000104549|ENST00000265896|SQLE 4.050253510475159 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7248 39.338 75.0 768370.0 25 0 52542.0 19089 LDRWAALL 8 87 479.2794450135249 956.5443370938498 2 479.2794067263603 MULTI CID FTMS 0 0 0 7243 404165.59375 1.0 0 0.0 5 Unmodified _LDRWAALL_ ENST00000487527.5_1_17:27934887-27934962:+|nuORF 9.347437153973935 0.7675937258251505 2 {NN|[MP]|[D{I|L}]|[EV]}CP 4 6 27.792 0.0 0.0 2.9054 0.0 0.0 0.0 525.3501070611936 525.3501070611936 15.573193899842437 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}CP 2.9054 - 33 + 1 1.96 47524.0 1.0 3788 3458 7243 DOHH2_400M_050219_2,7248 DOHH2_400M_050219_2,7248,LDRWAALL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7250 39.343 111.0 848380.0 25 0 126860.0 -1 0 56 905.4482018234356 1808.8818507136712 2 905.4479858279228 MULTI CID FTMS 0 0 0 7249 616066.375 0.932117373993077 -1 0.0442962646484375 1 2 H{I|L}PN{I|L}NEER[HM]N{I|L} 13 -1 95.946 0.0 0.0 5.3042 0.0 0.0 0.0 208.07290064029533 208.07290064029533 77.31867366038344 0.0 0.0 0.0 0 1.6989700043360187 1.6989700043360187 0.0 0.4247425010840047 H{I|L}PN{I|L}NEER[HM]N{I|L} 5.3042 - 511 + 1 1.96 68727.5 1.0 3789 3459 7249 DOHH2_400M_050219_2,7250 DOHH2_400M_050219_2,7250, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7251 39.35 372.0 311080.0 25 0 33568.0 + 42178 VSDRVTVLY 9 130 526.2917327729009 1050.5689126126017 2 526.2923461794853 MULTI CID FTMS 0 0 0 7249 182747.03125 1.0 0 0.0 2 Unmodified _VSDRVTVLY_ ENSG00000119723|ENST00000334571|COQ6;ENST00000556300.6_1_14:74417008-74425067:+|nuORF;ENST00000557584.5_1_14:74417012-74426158:+|nuORF;nc|ENSG00000119723|Q9Y2Z9-2|COQ6;nc|ENSG00000119723|Q9Y2Z9-3|COQ6 45.739877483867886 0.0497104363764649 2 [{I|L}T]KWEV{I|L}Y 8 6 + 52.184 0.0 0.0 4.9673 4.9673 74.661 0.0 0.0 0.0 1.5931199497454784 29.55987096095465 1.5931199497454784 2.0609971201947985 0 1.1549471895720984 1.3979400086720375 1.0114393726401687 0.0 [{I|L}T]KWEV{I|L}Y;[{I|L}V][MN]VTV{I|L}Y;{[QN]|[E{I|L}]|[KN]}[WK]TV{I|L}Y;[{I|L}V][MN]TVV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}[QT]VTV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}[QT]TVV{I|L}Y;{[ES]|[DT]|[{I|L}C]}A[R{I|L}]TV{I|L}Y;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTV{I|L}Y;{[ES]|[DT]|[{I|L}C]}A[K{I|L}]EV{I|L}Y;{[ET]|[MV]}G[R{I|L}]TV{I|L}Y 4.9673;4.7711;4.5801;4.5768;4.539;4.3447;4.2842;4.2524;4.1452;4.1452 -;-;-;-;-;-;-;-;-;- 1073 1 1.96 94302.4 1.0 3790 3459 7249 DOHH2_400M_050219_2,7251 DOHH2_400M_050219_2,7251,VSDRVTVLY True True VSDRVTVLY 39.349683 526.292346179485 1039868.5625 7249.0 ENST00000557584.5_1_14:74417012-74426158:+|nuORF;;nc|ENSG00000119723|Q9Y2Z9-3|COQ6;;ENSG00000119723|ENST00000334571|COQ6;;nc|ENSG00000119723|Q9Y2Z9-2|COQ6;;ENST00000556300.6_1_14:74417008-74425067:+|nuORF 5.788189093271892 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7252 39.354 245.0 486600.0 25 0 41757.0 33102 SESLLRGIY 9 123 519.2855456948414 1036.5565384564827 2 519.2846557497978 MULTI CID FTMS 0 0 0 7249 164695.0625 0.610872568792452 -1 0.0442962646484375 3 Unmodified _SESLLRGIY_ ENSG00000161960|ENST00000293831|EIF4A1;ENST00000550578.1_1_12:53547103-53547616:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584054.5_1_17:7476159-7478064:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1 15.847184025352805 0.4077185912009129 2 {I|L}{I|L}EY 4 6 30.037 0.0 0.0 2.8978 0.0 0.0 500.2572499005875 0.0 500.2572499005875 0.0 6.493920667436971 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{I|L}EY 2.8978 - 199 1 1.96 94211.8 1.0 3791 3459 7249 DOHH2_400M_050219_2,7252 DOHH2_400M_050219_2,7252,SESLLRGIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7253 39.368 800.0 170790.0 25 0 16071.0 + 7690 KEPGSGSGGGVYW 13 141 640.799053135419 1279.5835533376378 2 640.7990600466728 MULTI CID FTMS 0 0 0 7249 137123.796875 0.5048130225415718 -2 0.0770149230957031 4 Unmodified _EKREEGSPYW_ ENSG00000107371|ENST00000327304|EXOSC3;nc|ENSG00000107371|Q9NQT5-2|EXOSC3 26.268140514670165 0.3785003716575977 2 SYNGVTGVYW 10 8 70.631 0.0 0.0 5.5199 0.0 0.0 135.06859023261876 0.0 135.06859023261876 0.0 54.91808133927755 0.0 0.0 0 1.7302046884880935 0.0 2.5807808920067155 0.0 SYNGVTGVYW 5.5199 - 1896 1 1.96 102163.6 0.6800000071525574 3792 3459 7249 DOHH2_400M_050219_2,7253 DOHH2_400M_050219_2,7253,EKREEGSPYW False False KEPGSGSGGGVYW 39.36811 640.799060046673 1977122.25 7249.0 ENSG00000107371|ENST00000327304|EXOSC3;;nc|ENSG00000107371|Q9NQT5-2|EXOSC3 4.9395216306050616 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7254 39.375 359.0 207160.0 25 0 16954.0 + 15751 ISAGTRRGI 9 122 465.7772019834701 0 465.7756530642509 PEAK CID FTMS 0 0 0 7249 121260.828125 0.4140801683661823 -2 0.0770149230957031 5 Unmodified _ISAGTRRGI_ ENST00000561460.5_1_15:40849378-40849537:+|nuORF 11.640296217721598 0.2934555500198502 2 V 1 9 6.9897 0.0 0.0 0.75195 0.0 0.0 284.18097759799633 543.2679537408811 827.4489313388774 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.75195 - 32 + 1 1.96 61766.8 1.0 3793 3459 7249 DOHH2_400M_050219_2,7254 DOHH2_400M_050219_2,7254,ISAGTRRGI False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7255 39.388 800.0 220280.0 25 0 11232.0 + -1 NMFCTRLSRCF 11 146 746.3356923370286 1490.6568317408571 2 746.3392822146416 MULTI CID FTMS 0 0 0 7249 113433.84375 0.2356827374360982 -2 0.0770149230957031 6 2 Carbamidomethyl (C) _NMFC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 11.494710602746466 0.7960433852372589 2 [MN]PN{I|L}NADQRDG{M(Oxidation (M))|F} 13 -1 + 94.319 0.0 0.0 6.3273 6.3273 86.649 0.0 0.0 0.0 53.27987089272937 5.680705413955266 5.680705413955266 8.664610916297832 0 0.7614393726401688 1.5228787452803376 0.3807196863200844 1.8539171939081167 [MN]PN{I|L}NADQRDG{M(Oxidation (M))|F};[MN]PN{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PGG{I|L}NADQRDG{M(Oxidation (M))|F};[MN]PN{I|L}GGADQRDG{M(Oxidation (M))|F};[MN]PN{I|L}NAD[AG]RDG{M(Oxidation (M))|F};[MN]PN{I|L}NADQ[VG]DG{M(Oxidation (M))|F};[MN]PN{I|L}NADEAQQ{M(Oxidation (M))|F};[MN]PN{I|L}NAENRDG{M(Oxidation (M))|F};[MN]PN{I|L}NWQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PN{I|L}NWQ[VG]DG{M(Oxidation (M))|F} 6.3273;5.7461;5.7187;5.7187;5.7187;5.7187;5.6279;5.3831;5.348;5.3189 -;-;-;-;-;-;-;-;-;- 2638 + 1 1.96 124874.6 0.6000000238418579 3794 3459 7249 DOHH2_400M_050219_2,7255 DOHH2_400M_050219_2,7255,NMFCTRLSRCF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7256 39.394 333.0 215680.0 25 0 19612.0 + 14203 IDKMQVKI 8 95 487.7898952339078 973.5652375346156 2 487.7914306521416 MULTI CID FTMS 0 0 0 7249 104071.9765625 0.4535572435518851 -2 0.0770149230957031 7 Unmodified _IDKMQVKI_ REV__ENSG00000132554|ENST00000360863|RGS22;REV__nc|ENSG00000132554|Q8NE09-3|RGS22 14.581692164780916 0.6954967302934248 2 {NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]K{M(Oxidation (M))|F}[NP] 8 -1 + 22.184 0.0 0.0 2.2786 2.2786 76.963 0.0 0.0 0.0 9.70963206666802 0.0 0.0 9.84205732816768 0 0.0 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]K{M(Oxidation (M))|F}[NP];{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}VK{M(Oxidation (M))|F}[NP];{[QN]|[E{I|L}]|[KN]}KVK{M(Oxidation (M))|F}[NP];{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]{[WT]|[RM]}[KA];[TA]VVVK{M(Oxidation (M))|F}[NP] 2.2786;1.2677;1.1494;0.17178;0.059669 -;-;-;-;- 75 1 1.96 62521.6 1.0 3795 3459 7249 DOHH2_400M_050219_2,7256 DOHH2_400M_050219_2,7256,IDKMQVKI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7257 39.4 309.0 172770.0 25 0 31921.0 -1 MMKSMTVPF 9 104 544.252858367833 1086.491163802466 2 544.2548095583916 MULTI CID FTMS 0 0 0 7249 94891.8984375 0.8296069255470903 -1 0.0442962646484375 8 Oxidation (M) _MMKSM(Oxidation (M))TVPF_ ENST00000512561.5_1_5:68651732-68651771:-|nuORF 19.256988751693697 0.3154191944385105 2 TV{I|L}M 4 -1 25.972 0.0 0.0 2.3905 0.0 0.0 624.2430287091812 0.0 624.2430287091812 0.0 12.477216044145289 0.0 0.0 0 0.5738194166937225 0.0 0.8807196863200843 0.0 TV{I|L}M 2.3905 - 155 1 1.96 46295.8 1.0 3796 3459 7249 DOHH2_400M_050219_2,7257 DOHH2_400M_050219_2,7257,MMKSMTVPF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7259 39.405 53.0 948040.0 25 0 92545.0 + 38580 TTDFPGNYSGY 11 70 611.2563810020872 1220.4982090709743 2 611.2565795779228 MULTI CID FTMS 0 0 0 7258 947074.5 0.7958999669416557 -1 0.0622520446777343 1 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 51.629811660486645 0.1086041609037681 2 [MN]WS[DV]YSGY 10 7 [MN]WS[DV]Y + + 23.812 0.80086 0.089444 1.951 1.951 47.416 0.0 0.0 0.0 0.0 1.8001500618731114 0.0 0.0 0 0.0 0.0 0.0 0.0 [MN]WS[DV]YSGY 1.951 - 151 + 1 1.965 44236.4 1.0 3797 3460 7258 DOHH2_400M_050219_2,7259 DOHH2_400M_050219_2,7259,TTDFPGNYSGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7260 39.408 108.0 678150.0 25 0 204700.0 + 30503 REFPDRLVGY 10 59 626.3275432768801 1250.64053362056 2 626.3276244997978 MULTI CID FTMS 0 0 0 7258 370633.96875 0.6854019392129072 5 -0.5036201477050781 2 Unmodified _REFPDRLVGY_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 23.015651743759182 0.4515786786615758 2 [VG]E{M(Oxidation (M))|F} 4 9 30.476 0.0 0.0 2.4368 0.0 0.0 0.0 815.4022921197874 815.4022921197874 12.516894462103991 0.0 0.0 0.0 0 0.75 1.154901959985743 0.0 0.0 [VG]E{M(Oxidation (M))|F} 2.4368 - 22 + 1 1.965 63789.9 1.0 3798 3460 7258 DOHH2_400M_050219_2,7260 DOHH2_400M_050219_2,7260,REFPDRLVGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7261 39.411 172.0 430390.0 25 0 61546.0 + 24450 MHIPTGVI 8 111 434.2428106256922 866.4710683181844 2 434.2427245974541 MULTI CID FTMS 0 0 0 7258 294392.9375 0.7007906102755531 -3 0.1392669677734375 3 Unmodified _MHIPTGVI_ REV__ENSG00000133059|ENST00000367162|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-3|DSTYK 2.889219685676258 0.8067950007271085 2 K 1 -1 2.7642 0.0 0.0 0.31902 0.0 0.0 433.2419556246281 302.10556970767817 735.3475253323063 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.31902 - 10 + 1 1.965 61070.8 1.0 3799 3460 7258 DOHH2_400M_050219_2,7261 DOHH2_400M_050219_2,7261,MHIPTGVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7262 39.415 203.0 396060.0 25 0 56216.0 + 5197 DIRPKISL 8 98 471.2923139077164 940.5700748822328 2 471.2924682497978 MULTI CID FTMS 0 0 0 7258 206377.59375 0.5493303062319925 5 -0.5036201477050781 4 Unmodified _DIRPKISL_ ENSG00000198919|ENST00000361582|DZIP3;ENST00000495008.5_1_3:108355483-108366962:+|nuORF 36.506200033944 0.2927422953263032 2 D{I|L}R[KP]{I|L}S{I|L} 8 0 + 62.847 0.0 0.0 6.6818 6.6818 94.51 0.0 0.0 0.0 40.99775285321165 14.024174299985006 14.024174299985006 34.73320034371433 0 1.305462187404089 1.6989700043360187 0.75 0.0 + + D{I|L}R[KP]{I|L}S{I|L};VVW[KP]{I|L}S{I|L};[{I|L}P]AATR{I|L}{[TV]|[{I|L}S]};[{I|L}P][RK]D{I|L}{[TV]|[{I|L}S]};[{I|L}P][RK]{I|L}D{[TV]|[{I|L}S]};[KP]{NN|[MP]|[D{I|L}]|[EV]}R{I|L}{[TV]|[{I|L}S]};[KP][R{I|L}]D{I|L}{[TV]|[{I|L}S]} 6.6818;2.9891;2.5882;2.2514;1.3197;0.92044;0.76508 +;-;-;-;-;-;- + 158 + 1 1.965 69099.2 1.0 3800 3460 7258 DOHH2_400M_050219_2,7262 DOHH2_400M_050219_2,7262,DIRPKISL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7263 39.429 800.0 284020.0 25 0 32850.0 + 9738 FMDPEMETRY 10 142 659.7757323081793 1317.5369116831585 2 659.7746459841728 MULTI CID FTMS 0 0 0 7258 164102.28125 0.5384365910317594 -1 0.0622520446777343 5 Unmodified _FMDPEMETRY_ ENSG00000138031|ENST00000679454|ADCY3;nc|ENSG00000138031|O60266-2|ADCY3 63.22749603027936 0.0281198777558511 2 {M(Oxidation (M))|F}MDPEMETRY 10 0 + 87.727 0.0 0.0 6.6584 6.6584 84.79 0.0 0.0 0.0 5.550762695790112 5.550762695790112 5.550762695790112 5.550762695790112 0 0.9247425010840048 0.0 1.4749073637206092 0.4247425010840047 + + {M(Oxidation (M))|F}MDPEMETRY;[EP]M[{I|L}P]MEPDME;{M(Oxidation (M))|F}MDPEME{[TV]|[{I|L}S]}GY;{M(Oxidation (M))|F}MDPEME[HS][VP];[NG]W[{I|L}P]MEPDME;{M(Oxidation (M))|F}MDY[DP][DP]RY;{M(Oxidation (M))|F}MDP{[YD]|[{M(Oxidation (M))|F}M]}[DP]RY;{M(Oxidation (M))|F}MDY[C(Carbamidomethyl (C))Q][KT][EP];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}V][C(Carbamidomethyl (C))Q]YDME;{[ET]|[MV]}[YR]{[YD]|[{M(Oxidation (M))|F}M]}PDME 6.6584;6.2371;5.2182;4.7057;4.5095;3.637;3.637;3.1183;3.039;2.9084 +;-;-;-;-;-;-;-;-;- + 660 + 1 1.965 164129.9 0.7200000286102295 3801 3460 7258 DOHH2_400M_050219_2,7263 DOHH2_400M_050219_2,7263,FMDPEMETRY True True FMDPEMETRY 39.428711 659.774645984173 3899513.5 7258.0 nc|ENSG00000138031|O60266-2|ADCY3;;ENSG00000138031|ENST00000679454|ADCY3 7.698649724324544 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7264 39.434 297.0 235670.0 25 0 14772.0 + 23385 LTDPIQGTEY 10 111 568.776524366477 1135.538495799754 2 568.7772094607353 MULTI CID FTMS 0 0 0 7258 159815.703125 0.3841842247383089 -2 0.1065483093261718 6 Unmodified _LTDPIQGTEY_ ENSG00000172175|ENST00000649217|MALT1;nc|ENSG00000172175|Q9UDY8-2|MALT1 62.57269311338072 0.0298375429882549 2 [{I|L}T]DP{I|L}Q 6 4 37.998 0.0 0.0 3.3463 0.0 0.0 0.0 465.1626772785227 465.1626772785227 12.152478964635506 0.0 0.0 0.0 0 0.3252574989159953 1.3010299956639813 0.8882104921644451 0.0 + [{I|L}T]DP{I|L}Q 3.3463 + + 408 1 1.965 58321.0 1.0 3802 3460 7258 DOHH2_400M_050219_2,7264 DOHH2_400M_050219_2,7264,LTDPIQGTEY True True LTDPIQGTEY 39.434155 568.777209460735 13576960.5 7258.0 ENSG00000172175|ENST00000649217|MALT1;;nc|ENSG00000172175|Q9UDY8-2|MALT1 6.958706378936768 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7265 39.439 248.0 263480.0 25 0 19705.0 + 20101 DIKEKLCYV 9 96 554.7974825844958 1107.5804122357915 2 555.7986938357353 MULTI CID FTMS 0 0 0 7258 157852.34375 0.6878228887805595 1 -0.0940628051757812 7 Unmodified _LKEKAEEVY_ ENSG00000188219|ENST00000683005|POTEE;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000163017|ENST00000345517|ACTG2;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI;ENSG00000184009|ENST00000573283|ACTG1;ENST00000574671.5_1_17:79477718-79478688:-|nuORF 20.453626601364224 0.2830276176381075 2 {[TV]|[{I|L}S]}{[VA]|[{I|L}G]}KCY 7 6 18.956 0.0 0.0 1.7115 0.0 0.0 0.0 340.1677284801853 340.1677284801853 2.5024678227801544 0.0 0.0 0.0 0 0.0 0.721246399047171 0.805462187404089 0.0 {[TV]|[{I|L}S]}{[VA]|[{I|L}G]}KCY 1.7115 - 268 1 1.965 54621.8 1.0 3803 3460 7258 DOHH2_400M_050219_2,7265 DOHH2_400M_050219_2,7265,LKEKAEEVY False False DIKEKLCYV 39.438788 555.798693835735 1427613.5 7258.0 ENSG00000188219|ENST00000683005|POTEE;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;;ENSG00000143632|ENST00000366684|ACTA1;;ENSG00000222038|ENST00000409602|POTEJ;;ENSG00000163017|ENST00000345517|ACTG2;;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENST00000418987.2_1_9:103493819-103494230:+|nuORF;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000075624|ENST00000646664|ACTB;;ENSG00000196604|ENST00000409914|POTEF;;ENSG00000107796|ENST00000224784|ACTA2;;ENSG00000159251|ENST00000290378|ACTC1;;ENSG00000196834|ENST00000451531|POTEI;;ENSG00000184009|ENST00000573283|ACTG1;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF 4.943493048350017 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7266 39.444 271.0 291350.0 25 0 35963.0 25759 NIVDLLTP 8 104 442.7577956967499 0 442.7567626833916 PEAK CID FTMS 0 0 0 7258 139045.40625 0.5769058125025284 -4 0.1742019653320312 8 Unmodified _NIVDLLTP_ ENSG00000180113|ENST00000316081|TDRD6;nc|ENSG00000180113|O60522-2|TDRD6 4.75600775471527 0.5825752635465162 2 D 1 7 5.9691 0.0 0.0 0.67562 0.0 0.0 442.2825458839311 323.17136560611567 765.4539114900467 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + D 0.67562 + + 4 + 1 1.965 66442.4 1.0 3804 3460 7258 DOHH2_400M_050219_2,7266 DOHH2_400M_050219_2,7266,NIVDLLTP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7267 39.458 800.0 178840.0 25 0 8962.6 -1 EAGTRCQVAGW 11 144 617.782592871844 1233.550632810488 2 617.7832519412041 MULTI CID FTMS 0 0 0 7258 104760.7578125 1.0 0 0.0 9 Carbamidomethyl (C) _EAGTRC(Carbamidomethyl (C))QVAGW_ ENSG00000172232|ENST00000233997|AZU1 31.26834338654808 0.3580123756476716 2 {[CP]|[EA]}SSW[WQ]{I|L}{NN|[MP]|[D{I|L}]|[EV]} 10 -1 + 44.746 0.0 0.0 3.6274 3.6274 67.295 0.0 0.0 0.0 0.4129056829700275 0.4129056829700275 0.4129056829700275 0.4129056829700275 0 0.7742275032520141 0.0 0.3252574989159953 1.1866654986684733 {[CP]|[EA]}SSW[WQ]{I|L}{NN|[MP]|[D{I|L}]|[EV]};[TA]D[KT]{[CP]|[EA]}QQGW;{[CP]|[EA]}SSSQQ[KT]D[PG];{[CP]|[EA]}S[KT]{[CP]|[EA]}QQGW;{[CP]|[EA]}SSWG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[CP]|[EA]}SSDA[WQ]{I|L}{NN|[MP]|[D{I|L}]|[EV]};[TA]D[KT]{[CP]|[EA]}AGQGW;{[CP]|[EA]}S[KT]{[CP]|[EA]}AGQGW;{[CP]|[EA]}SSDAG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[CP]|[EA]}SSW[WQ]{[NV]|[RG]}Q 3.6274;3.5939;3.5158;3.5076;3.4883;3.4754;3.4448;3.3585;3.3392;3.3305 -;-;-;-;-;-;-;-;-;- 4571 + 1 1.965 107451.1 0.6100000143051147 3805 3460 7258 DOHH2_400M_050219_2,7267 DOHH2_400M_050219_2,7267,EAGTRCQVAGW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7268 39.467 520.0 129140.0 25 0 7447.6 -1 HSLILIMG 8 119 450.2557495933007 898.4969462534013 2 450.2563049197197 MULTI CID FTMS 0 0 0 7258 102499.4375 0.5885170893830486 -1 0.0622520446777343 10 Oxidation (M) _HSLILIM(Oxidation (M))G_ ENSG00000127366|ENST00000247883|TAS2R5 2.302733041254933 0.8103549651115762 2 {M(Oxidation (M))|F} 1 -1 11.42 0.0 0.0 1.271 0.0 0.0 733.4177511623842 0.0 733.4177511623842 0.0 3.2474232062805 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.271 + + 23 + 1 1.965 57319.0 1.0 3806 3460 7258 DOHH2_400M_050219_2,7268 DOHH2_400M_050219_2,7268,HSLILIMG False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7269 39.477 512.0 144980.0 25 0 10589.0 -1 TSMWPLLLSK 10 116 596.3240496139051 1190.63354629461 2 596.3240844607353 MULTI CID FTMS 0 0 0 7258 83698.5703125 0.5737044733177025 -1 0.0622520446777343 11 Oxidation (M) _TSM(Oxidation (M))WPLLLSK_ ENST00000526924.5_1_17:42827021-42827294:+|nuORF 6.723162845929126 0.6955379296933136 2 T{M(Oxidation (M))|F}STNG{I|L}RP 9 -1 49.836 0.0 0.0 4.1857 0.0 0.0 199.1589559337416 0.0 199.1589559337416 0.0 34.619347108016214 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 T{M(Oxidation (M))|F}STNG{I|L}RP 4.1857 - 768 + 1 1.965 56219.8 1.0 3807 3460 7258 DOHH2_400M_050219_2,7269 DOHH2_400M_050219_2,7269,TSMWPLLLSK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7270 39.48 170.0 487760.0 25 0 35497.0 + 35536 STPDHSFSL 9 90 495.7299089271846 989.4452649211692 2 495.7292053103447 MULTI CID FTMS 0 0 0 7258 87442.046875 0.0505913217722082 -3 0.1392669677734375 12 Unmodified _STPDHSFSL_ ENSG00000128272|ENST00000674920|ATF4 36.04419817259434 0.0971720506436186 2 {I|L}S{M(Oxidation (M))|F}DCS{I|L} 7 6 54.003 0.0 0.0 5.4579 0.0 0.0 206.0902649475574 0.0 206.0902649475574 0.0 27.61639196620613 0.0 0.0 0 0.0 0.0 1.9802046884880933 0.0 {I|L}S{M(Oxidation (M))|F}DCS{I|L} 5.4579 - 478 + 1 1.965 67189.6 1.0 3808 3460 7258 DOHH2_400M_050219_2,7270 DOHH2_400M_050219_2,7270,STPDHSFSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7271 39.494 800.0 161980.0 25 0 12596.0 + 830 AETDPGMVHL 10 161 535.2519710329642 1068.4893891327283 2 535.2526733279228 MULTI CID FTMS 0 0 0 7258 98205.6875 0.9957055871250152 1 -0.0940628051757812 13 Unmodified _AETDPGMVHL_ ENSG00000111596|ENST00000229195|CNOT2;ENST00000548939.1_1_12:70732225-70736007:+|nuORF;nc|ENSG00000111596|Q9NZN8-2|CNOT2;nc|ENSG00000111596|Q9NZN8-3|CNOT2;nc|ENSG00000111596|Q9NZN8-4|CNOT2;nc|ENSG00000111596|Q9NZN8-5|CNOT2 26.88365393820708 0.3646707531412818 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[C(Carbamidomethyl (C))C]NE{I|L} 7 7 22.875 0.0 0.0 2.1409 0.0 0.0 0.0 202.1263564531778 202.1263564531778 7.302239151715106 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.6307196863200843 0.7742275032520141 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[C(Carbamidomethyl (C))C]NE{I|L} 2.1409 - 382 1 1.965 101377.6 0.4600000083446502 3809 3460 7258 DOHH2_400M_050219_2,7271 DOHH2_400M_050219_2,7271,AETDPGMVHL False True AETDPGMVHL 39.494128 535.252673327923 500148.5625 7258.0 nc|ENSG00000111596|Q9NZN8-3|CNOT2;;nc|ENSG00000111596|Q9NZN8-4|CNOT2;;nc|ENSG00000111596|Q9NZN8-5|CNOT2;;ENSG00000111596|ENST00000229195|CNOT2;;ENST00000548939.1_1_12:70732225-70736007:+|nuORF;;nc|ENSG00000111596|Q9NZN8-2|CNOT2 4.455548683802287 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7273 39.499 25.0 1609600.0 25 0 208180.0 -1 0 45 603.9673254404012 1808.880146921404 3 603.9678832888603 MULTI CID FTMS 0 0 0 7272 1626365.5 0.7774431537308257 1 -0.0893592834472656 1 2 E{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}Q 9 -1 35.111 0.0 0.0 1.941 0.0 0.0 688.3633900373062 0.0 688.3633900373062 0.0 13.873949984654253 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 E{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}Q 1.941 - 45 1 1.965 37738.2 1.0 3810 3461 7272 DOHH2_400M_050219_2,7273 DOHH2_400M_050219_2,7273, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7274 39.506 385.0 196380.0 25 0 11932.0 + 18012 KSDVHLNFY 9 111 561.7819784042864 1121.5494038753727 2 561.7819091677666 MULTI CID FTMS 0 0 0 7272 120983.7421875 0.109174364794477 4 -0.4095573425292969 2 Unmodified _KSDVHLNFY_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 26.268140514670165 0.1969607489560049 2 SK{I|L}N{M(Oxidation (M))|F}Y 6 4 51.736 0.0 0.0 4.6129 0.0 0.0 351.1556568830094 0.0 351.1556568830094 0.0 30.794196309807745 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.6989700043360187 SK{I|L}N{M(Oxidation (M))|F}Y 4.6129 - 483 1 1.965 60656.1 1.0 3811 3461 7272 DOHH2_400M_050219_2,7274 DOHH2_400M_050219_2,7274,KSDVHLNFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7275 39.507 69.0 677710.0 25 0 116080.0 -1 LSLLHMAI 8 76 457.2642121021641 912.5138712711282 2 457.2642089724541 MULTI CID FTMS 0 0 0 7272 713914.25 1.0 0 0.0 3 Oxidation (M) _LSLLHM(Oxidation (M))AI_ ENSG00000089053|ENST00000261819|ANAPC5;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5 2.577480529830294 0.808687252328423 2 W 1 -1 13.979 0.0 0.0 1.532 0.0 0.0 708.4235525228845 0.0 708.4235525228845 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.532 - 12 + 1 1.965 42263.1 1.0 3812 3461 7272 DOHH2_400M_050219_2,7275 DOHH2_400M_050219_2,7275,LSLLHMAI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7276 39.512 211.0 237090.0 25 0 17101.0 -1 0 74 964.4444617022658 2890.3115557069973 3 965.1141845583916 MULTI CID FTMS 0 0 0 7272 352897.53125 0.690503854639019 -2 0.1563148498535156 4 2 [NP]{I|L}N{M(Oxidation (M))|F} 5 -1 11.304 0.0 0.0 0.39109 0.0 0.0 0.0 2302.042975955297 2302.042975955297 2.3769549433245434 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 [NP]{I|L}N{M(Oxidation (M))|F} 0.39109 - 145 1 1.965 44707.7 1.0 3813 3461 7272 DOHH2_400M_050219_2,7276 DOHH2_400M_050219_2,7276, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7277 39.515 184.0 308570.0 25 0 30540.0 + 40400 VIDSAELQAY 10 101 554.7786642977485 1107.542775662297 2 554.7793456912041 MULTI CID FTMS 0 0 0 7272 173879.625 0.4313065333527742 -1 0.0940628051757812 5 Unmodified _VIDSAELQAY_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 32.30548876998284 0.2428506522065767 2 [EP][PG]{I|L}V{I|L}DS 9 9 23.707 0.0 0.0 2.1405 0.0 0.0 0.0 197.05701624088127 197.05701624088127 2.156818820794939 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 [EP][PG]{I|L}V{I|L}DS 2.1405 - 805 + 1 1.965 48690.7 1.0 3814 3461 7272 DOHH2_400M_050219_2,7277 DOHH2_400M_050219_2,7277,VIDSAELQAY False True VIDSAELQAY 39.515084 554.779345691204 2877985.5 7272.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 4.794515212376912 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7278 39.529 800.0 247740.0 25 0 15170.0 + 33077 SERDPYLVSY 10 134 614.7962942171594 1227.5780355011186 2 614.7969238162041 MULTI CID FTMS 0 0 0 7272 113827.09375 0.602273398058124 -1 0.0940628051757812 6 Unmodified _SERDPYLVSY_ ENSG00000105483|ENST00000651546|CARD8;ENST00000522051.5_1_19:48714969-48735770:-|nuORF;ENST00000522773.5_1_19:48714969-48736545:-|nuORF;nc|ENSG00000105483|Q9Y2G2-1|CARD8;nc|ENSG00000105483|Q9Y2G2-4|CARD8;nc|ENSG00000105483|Q9Y2G2-7|CARD8 57.24910588100465 0.0438022649904578 2 [VS]WD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VSY 10 2 + 63.893 0.0 0.0 5.2048 5.2048 82.101 0.0 0.0 0.0 8.235680527055962 16.316825264666825 8.235680527055962 8.02378753635658 0 1.325257498915995 1.2218487496163564 0.3807196863200844 0.0 [VS]WD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VSY;[VS]WD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}SY;[{I|L}V]C(Carbamidomethyl (C))Q[C(Carbamidomethyl (C))S]{I|L}VSY;[{I|L}V]C(Carbamidomethyl (C))D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VSY;{[YD]|[{M(Oxidation (M))|F}M]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[QP]{I|L}VSY;[VS]WD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SVY;[VS]WQN[{M(Oxidation (M))|F}V]VSY;[VS]WD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}WY;{[ES]|[DT]|[{I|L}C]}RD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VSY;[{I|L}V]C(Carbamidomethyl (C))D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}SY 5.2048;4.5511;4.5339;4.5163;4.3287;4.307;4.3037;4.2653;4.1669;3.8627 -;-;-;-;-;-;-;-;+;- + 2950 1 1.965 146222.8 0.6000000238418579 3815 3461 7272 DOHH2_400M_050219_2,7278 DOHH2_400M_050219_2,7278,SERDPYLVSY True True SERDPYLVSY 39.528921 614.796923816204 1402161.5 7272.0 nc|ENSG00000105483|Q9Y2G2-1|CARD8;;ENST00000522051.5_1_19:48714969-48735770:-|nuORF;;nc|ENSG00000105483|Q9Y2G2-7|CARD8;;ENSG00000105483|ENST00000651546|CARD8;;nc|ENSG00000105483|Q9Y2G2-4|CARD8;;ENST00000522773.5_1_19:48714969-48736545:-|nuORF 6.763814608256022 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7279 39.539 583.0 148410.0 25 0 14824.0 + 10426 FTDIDGQVY 9 121 529.2459481955817 1056.4773434579631 2 529.2453491091728 MULTI CID FTMS 0 0 0 7272 107905.1328125 1.0 0 0.0 7 Unmodified _FTDIDGQVY_ ENSG00000120008|ENST00000263461|WDR11;ENST00000478567.5_1_10:122645388-122659588:+|nuORF;ENST00000497136.6_1_10:122626245-122665534:+|nuORF;ENST00000604509.5_1_10:122640390-122648742:+|nuORF 25.399314129420983 0.2080152500878129 2 EEQPQY 6 7 26.252 0.0 0.0 2.4849 0.0 0.0 264.1481055083771 0.0 264.1481055083771 0.0 11.201440220286797 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 EEQPQY 2.4849 - 853 + 1 1.965 73518.1 1.0 3816 3461 7272 DOHH2_400M_050219_2,7279 DOHH2_400M_050219_2,7279,FTDIDGQVY False True FTDIDGQVY 39.539136 529.245349109173 1146815.125 7272.0 ENST00000604509.5_1_10:122640390-122648742:+|nuORF;;ENSG00000120008|ENST00000263461|WDR11;;ENST00000497136.6_1_10:122626245-122665534:+|nuORF;;ENST00000478567.5_1_10:122645388-122659588:+|nuORF 2.412853717803955 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7280 39.545 295.0 274130.0 25 0 37317.0 + 21609 LPKQKKSL 8 93 471.3125807861188 940.6106086390377 2 471.3126403689384 MULTI CID FTMS 0 0 0 7272 103460.734375 1.0 0 0.0 8 Unmodified _LPKQKKSL_ REV__ENSG00000198554|ENST00000360586|WDHD1;REV__ENST00000475379.1_1_14:55408210-55411247:-|nuORF;REV__nc|ENSG00000198554|O75717-2|WDHD1 24.020572477871973 0.5389365498350341 2 {I|L}P 2 -1 44.024 0.0 0.0 4.6803 0.0 0.0 0.0 727.4508875275267 727.4508875275267 22.11249690339386 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {I|L}P 4.6803 + + 112 + 1 1.965 68924.9 1.0 3817 3461 7272 DOHH2_400M_050219_2,7280 DOHH2_400M_050219_2,7280,LPKQKKSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7281 39.554 557.0 331930.0 25 0 54965.0 + 45230 YRMDGHIQL 9 162 378.1904344324413 0 378.1900817751884 PEAK CID FTMS 0 0 0 7272 103073.5390625 0.7258539396300764 -1 0.0940628051757812 9 Unmodified _YRMDGHIQL_ ENSG00000125124|ENST00000245157|BBS2;ENST00000561951.5_1_16:56535647-56545169:-|nuORF;ENST00000565781.5_1_16:56536573-56553907:-|nuORF;ENST00000569342.5_1_16:56536573-56553774:-|nuORF 16.149105407346934 0.2417352846137613 2 GEY 3 8 9.2968 0.0 0.0 1.2324 0.0 0.0 132.11425401937623 270.11289392642817 402.2271479458044 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GEY 1.2324 - 21 + 1 1.965 143520.0 1.0 3818 3461 7272 DOHH2_400M_050219_2,7281 DOHH2_400M_050219_2,7281,YRMDGHIQL False True YRMDGHIQL 39.554298 378.190081775188 1298839.0 7272.0 ENSG00000125124|ENST00000245157|BBS2;;ENST00000561951.5_1_16:56535647-56545169:-|nuORF;;ENST00000569342.5_1_16:56536573-56553774:-|nuORF;;ENST00000565781.5_1_16:56536573-56553907:-|nuORF 3.5570626258850098 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7282 39.563 483.0 167970.0 25 0 28745.0 + 30324 RAEDAMRLYY 10 99 644.3098422155653 1286.6051314979304 2 644.3104736208916 MULTI CID FTMS 0 0 0 7272 96836.078125 1.0 0 0.0 10 Unmodified _RAEDAMRLYY_ ENSG00000105258|ENST00000221859|POLR2I;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;ENST00000589591.5_1_19:36604659-36605638:-|nuORF;ENST00000592962.5_1_19:36604659-36605276:-|nuORF 26.020703789607367 0.3840598856887971 2 {[QV]|[N{I|L}]|[RA]|[KV]}TE{[WN]|[YH]}[KG]YY 10 6 + 23.918 0.0 0.0 1.859 1.859 76.594 0.0 0.0 0.0 2.46462170693448 5.233871898888154 2.46462170693448 10.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}TE{[WN]|[YH]}[KG]YY;{[QV]|[N{I|L}]|[RA]|[KV]}TE{[WT]|[RM]}[TP]YY;{[QV]|[N{I|L}]|[RA]|[KV]}TE{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}H{M(Oxidation (M))|F};[NP]{I|L}{M(Oxidation (M))|F}A{[WT]|[RM]}{I|L}YY;[{I|L}P]N{M(Oxidation (M))|F}A{[WT]|[RM]}{I|L}YY 1.859;1.0818;0.95346;0.79233;0.74726 -;-;-;-;- 133 + 1 1.965 64211.4 1.0 3819 3461 7272 DOHH2_400M_050219_2,7282 DOHH2_400M_050219_2,7282,RAEDAMRLYY False True RAEDAMRLYY 39.562854 644.310473620892 556998.375 7272.0 ENST00000592962.5_1_19:36604659-36605276:-|nuORF;;ENSG00000105258|ENST00000221859|POLR2I;;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;;ENST00000589591.5_1_19:36604659-36605638:-|nuORF 5.161765257517497 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7283 39.578 800.0 154750.0 25 0 7288.8 + 33106 SESLVHESW 9 165 537.2480970844929 1072.4816412357857 2 537.2484619021416 MULTI CID FTMS 0 0 0 7272 94185.2734375 1.0 0 0.0 11 Unmodified _SESLVHESW_ ENSG00000100242|ENST00000689035|SUN2;nc|ENSG00000100242|Q9UH99-2|SUN2;nc|ENSG00000100242|Q9UH99-3|SUN2 52.268347100219714 0.0353964759249114 2 {[ES]|[DT]|[{I|L}C]}S{I|L}YQ{M(Oxidation (M))|F}S{I|L} 9 4 + 29.196 0.0 0.0 2.7223 2.7223 72.533 0.0 0.0 0.0 4.57084533625747 1.0662352933547297 1.0662352933547297 6.282344974114402 0 0.75 0.0 0.5866968715561641 0.0 {[ES]|[DT]|[{I|L}C]}S{I|L}YQ{M(Oxidation (M))|F}S{I|L};{[ES]|[DT]|[{I|L}C]}HV{I|L}SW{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}S{I|L}Y[AG]{M(Oxidation (M))|F}S{I|L};{[YC]|[HE]}SV{I|L}SW{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}S{I|L}YQ{[TV]|[{I|L}S]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}S[W{M(Oxidation (M))|F}][RV]Y;{[ES]|[DT]|[{I|L}C]}S{[{M(Oxidation (M))|F}C]|[YS]}[KP]{I|L}Y;{[YC]|[HE]}VS{I|L}SW{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}S[MT]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y;{[ES]|[DT]|[{I|L}C]}S[YQ]{I|L}{M(Oxidation (M))|F}S{I|L} 2.7223;2.1365;1.8637;1.8367;1.7999;1.6749;1.6272;1.581;1.5533;1.5353 -;-;-;-;-;-;-;-;-;- 554 + 1 1.965 95995.3 0.5099999904632568 3820 3461 7272 DOHH2_400M_050219_2,7283 DOHH2_400M_050219_2,7283,SESLVHESW True True SESLVHESW 39.577861 537.248461902142 436302.65625 7272.0 ENSG00000100242|ENST00000689035|SUN2;;nc|ENSG00000100242|Q9UH99-3|SUN2;;nc|ENSG00000100242|Q9UH99-2|SUN2 5.067883014678955 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7284 39.584 310.0 171730.0 25 0 12718.0 + 30506 REFPDRLVGY 10 81 417.8874137099507 1250.6404117300522 3 417.8873474001884 MULTI CID FTMS 0 0 0 7272 160396.359375 0.6304691628381288 2 -0.1849403381347656 12 Unmodified _REFPDRLVGY_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 21.2413784809298 0.4911323115084531 2 {[RE]|[WV]}{M(Oxidation (M))|F}[DP]R{I|L}VGY 10 0 + 51.387 0.0 0.0 4.1089 4.1089 75.582 0.0 0.0 0.0 0.4575749056067479 40.41833743429045 0.4575749056067479 5.982036305339911 0 1.3494850021680094 0.0 0.0 0.4247425010840047 + + {[RE]|[WV]}{M(Oxidation (M))|F}[DP]R{I|L}VGY;{[RE]|[WV]}{M(Oxidation (M))|F}[DP]VG{I|L}VGY;{[RE]|[WV]}{M(Oxidation (M))|F}[DP]VG{I|L}RY;{[RE]|[WV]}{M(Oxidation (M))|F}[DP][K{I|L}]V[{M(Oxidation (M))|F}T] 4.1089;3.6306;3.0865;0.6535 +;-;-;- + 86 1 1.965 47006.4 1.0 3821 3461 7272 DOHH2_400M_050219_2,7284 DOHH2_400M_050219_2,7284,REFPDRLVGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7286 39.594 355.0 184700.0 25 0 24035.0 + -1 SSEQTFMYY 9 116 586.233788527575 1170.45302412195 2 586.2343627810478 MULTI CID FTMS 0 0 0 7285 114831.359375 0.3374034703877914 1 -0.0955810546875 1 Oxidation (M) _SSEQTFM(Oxidation (M))YY_ ENSG00000115758|ENST00000234111|ODC1 32.30548876998284 0.1201446275138228 2 [AG]ES{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[QT]D 11 -1 + 26.885 0.0 0.0 2.297 2.297 68.442 0.0 0.0 0.0 2.460640069764551 14.121142906920008 2.460640069764551 3.151546383555882 0 0.4247425010840047 0.6575773191777937 0.8851518780601924 0.0 [AG]ES{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[QT]D;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[QT]D;[AG]ESS{[ET]|[MV]}{M(Oxidation (M))|F}[QT]D;{[ET]|[MV]}N{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[QT]D;{[ES]|[DT]|[{I|L}C]}Q{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[QT]D;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}H{[ET]|[MV]}{M(Oxidation (M))|F}[QT]D;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))M]Q{M(Oxidation (M))|F}[QT]D;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SS{[ET]|[MV]}{M(Oxidation (M))|F}[QT]D;{[ET]|[MV]}NS{[ET]|[MV]}{M(Oxidation (M))|F}[QT]D;{[ES]|[DT]|[{I|L}C]}QS{[ET]|[MV]}{M(Oxidation (M))|F}[QT]D 2.297;2.0277;1.9679;1.9153;1.8799;1.7607;1.717;1.6987;1.5862;1.5508 -;-;-;-;-;-;-;-;-;- 502 1 1.977 55074.9 1.0 3822 3462 7285 DOHH2_400M_050219_2,7286 DOHH2_400M_050219_2,7286,SSEQTFMYY False False SSEQTFMYY 39.593794 586.234362781048 5042689.0 7285.0 ENSG00000115758|ENST00000234111|ODC1 6.796422640482585 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7287 39.595 51.0 1419700.0 25 0 262820.0 + 44115 YLDDPDLKY 9 69 571.2739964826986 1140.5334400321972 2 571.2743408083916 MULTI CID FTMS 0 0 0 7285 979620.125 0.204455482016959 -2 0.1834220886230468 2 Unmodified _YLDDPDLKY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 36.506200033944 0.094635877243972 2 Y{I|L}DD[DP]{I|L}KY 9 0 + 82.713 0.0 0.0 7.2522 7.2522 96.908 0.0 0.0 0.0 65.71842196392844 13.46787486224656 13.46787486224656 82.7132064533734 0 1.110924374808178 2.0 0.0 0.0 + + Y{I|L}DD[DP]{I|L}KY 7.2522 + + 97 + 1 1.977 58091.1 1.0 3823 3462 7285 DOHH2_400M_050219_2,7287 DOHH2_400M_050219_2,7287,YLDDPDLKY True True YLDDPDLKY 39.595137 571.274340808392 111887844.0 7285.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 9.39166005452474 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7288 39.6 236.0 543830.0 25 0 76685.0 + 9510 FLDSTGSRLDY 11 90 637.3062600413134 1272.5979671494267 2 637.3066284060478 MULTI CID FTMS 0 0 0 7285 429501.9375 0.4934300572511273 -1 0.0893592834472656 3 Unmodified _FLDSTGSRLDY_ ENSG00000136261|ENST00000258761|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF;nc|ENSG00000136261|Q9Y6E2-2|BZW2 60.899326713953855 0.0654953153043458 2 GTSD{I|L}E 6 8 65.904 0.0 0.0 5.1787 0.0 0.0 652.3163929669937 0.0 652.3163929669937 0.0 34.36636269262294 0.0 0.0 0 1.424742501084005 0.0 0.75 0.0 GTSD{I|L}E 5.1787 - 507 1 1.977 99545.6 1.0 3824 3462 7285 DOHH2_400M_050219_2,7288 DOHH2_400M_050219_2,7288,FLDSTGSRLDY True True FLDSTGSRLDY 39.599569 637.306628406048 18301788.0 7285.0 nc|ENSG00000136261|Q9Y6E2-2|BZW2;;ENSG00000136261|ENST00000258761|BZW2;;ENST00000480517.5_1_7:16705068-16725727:+|nuORF 6.984780629475911 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7289 39.602 105.0 556070.0 25 0 61156.0 19090 LDRWAALL 8 95 479.2794450135249 956.5443370938498 2 479.2794982790947 MULTI CID FTMS 0 0 0 7285 250410.671875 0.619574441138336 4 -0.4230918884277344 4 Unmodified _LDRWAALL_ ENST00000487527.5_1_17:27934887-27934962:+|nuORF 9.347437153973935 0.7675937258251505 2 {NN|[MP]|[D{I|L}]|[EV]}C 3 6 27.69 0.0 0.0 2.8947 0.0 0.0 0.0 622.4040621393186 622.4040621393186 16.720449851406514 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}C 2.8947 - 30 + 1 1.977 49933.8 1.0 3825 3462 7285 DOHH2_400M_050219_2,7289 DOHH2_400M_050219_2,7289,LDRWAALL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7290 39.605 186.0 472540.0 25 0 46806.0 + 5402 DLKVKLTEV 9 103 522.8181458705023 1043.6217388078046 2 522.8183471560478 MULTI CID FTMS 0 0 0 7285 248667.03125 0.2528188540739593 -1 0.0893592834472656 5 Unmodified _DLKVKLTEV_ ENSG00000132467|ENST00000254803|UTP3 78.11562728322046 0.0179733105885776 2 VEKVK{I|L}TEV 9 2 + 107.45 0.0 0.0 10.296 10.296 83.617 0.0 0.0 0.0 0.796896906561031 13.659964294993756 0.796896906561031 0.796896906561031 0 2.7856668758921828 2.0 1.610924374808178 0.0 VEKVK{I|L}TEV;D{I|L}KVK{I|L}TEV;VEKVK{I|L}TD{I|L};D{I|L}KVK{I|L}TD{I|L};{NN|[MP]|[D{I|L}]|[EV]}KVK{I|L}TEV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}TKVEV;{NN|[MP]|[D{I|L}]|[EV]}KVKPV{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}KVPKV{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}TK{I|L}DV;[{I|L}T]AAVK{I|L}TEV 10.296;10.22;8.9874;8.911;8.3495;6.9873;6.8286;6.2474;5.968;5.8629 -;+;-;-;+;-;-;-;-;- + 1161 + 1 1.977 71829.8 1.0 3826 3462 7285 DOHH2_400M_050219_2,7290 DOHH2_400M_050219_2,7290,DLKVKLTEV True True DLKVKLTEV 39.605391 522.818347156048 11956096.0 7285.0 ENSG00000132467|ENST00000254803|UTP3 5.6496405601501465 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7291 39.61 274.0 219830.0 25 0 17675.0 + 5908 DPYLKPYAV 9 97 533.2844581136259 1064.5543632940517 2 533.2843505740166 MULTI CID FTMS 0 0 0 7285 128209.2890625 0.4726266155075593 -1 0.0893592834472656 6 Unmodified _DPYLKPYAV_ ENSG00000114480|ENST00000429644|GBE1 39.957323273325 0.0756908302845263 2 [DP]Y{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV 9 0 + 58.937 0.0 0.0 5.5363 5.5363 80.646 0.0 0.0 0.0 20.163800089887545 5.440680443502757 5.440680443502757 5.440680443502757 0 1.1861818737241734 1.6989700043360187 0.3252574989159953 0.0 + + [DP]Y{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV;[DP]Y{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L};[DP]Y{I|L}K[Y{I|L}][PG];[DP]Y{I|L}K[YV][PA];C(Carbamidomethyl (C)){[QS]|[NT]}{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV;C(Carbamidomethyl (C))[KS]{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV;C(Carbamidomethyl (C))[KS]{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L};C(Carbamidomethyl (C)){[QS]|[NT]}{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L};C(Carbamidomethyl (C))[KS]{I|L}K[Y{I|L}][PG];C(Carbamidomethyl (C))[KS]{I|L}K[YV][PA] 5.5363;5.0252;3.8695;3.5868;3.2999;3.2999;2.7889;2.7889;1.6332;1.3504 +;-;-;-;-;-;-;-;-;- + 297 + 1 1.977 56683.3 1.0 3827 3462 7285 DOHH2_400M_050219_2,7291 DOHH2_400M_050219_2,7291,DPYLKPYAV True True DPYLKPYAV 39.610452 533.284350574017 4503968.0 7285.0 ENSG00000114480|ENST00000429644|GBE1 7.684799035390218 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7292 39.623 708.0 192240.0 25 0 25321.0 + 32890 SEIGKAVGF 9 151 454.2474158620934 906.4802787909867 2 454.2468139529228 MULTI CID FTMS 0 0 0 7285 105617.53125 0.085434651974777 9 -0.8918113708496094 7 Unmodified _SEIGKAVGF_ ENSG00000092853|ENST00000318121|CLSPN;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN 21.74664581756881 0.2544899275067181 2 {[ES]|[DT]|[{I|L}C]}{I|L}[HA]A{I|L} 7 5 19.018 0.0 0.0 2.098 0.0 0.0 0.0 182.0934542291625 182.0934542291625 4.06081270784008 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}[HA]A{I|L} 2.098 - 430 + 1 1.977 106630.7 1.0 3828 3462 7285 DOHH2_400M_050219_2,7292 DOHH2_400M_050219_2,7292,SEIGKAVGF False True SEIGKAVGF 39.622733 454.246813952923 20292855.0 7285.0 ENSG00000092853|ENST00000318121|CLSPN;;nc|ENSG00000092853|Q9HAW4-2|CLSPN;;nc|ENSG00000092853|Q9HAW4-3|CLSPN 1.980132261912028 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7293 39.631 445.0 289280.0 25 0 19217.0 + 40566 VKGKSGSG 8 177 360.2060064383613 718.3974599435227 2 360.2050964236259 MULTI CID FTMS 0 0 0 7285 118477.3515625 0.0612773185518151 10 -0.9462776184082032 8 Unmodified _VKGKSGSG_ REV__ENST00000473395.1_1_2:198365100-198366019:+|nuORF 0.0 0.8243325171867699 2 {I|L} 1 -1 9.6041 0.0 0.0 1.3369 0.0 0.0 587.3023957118805 0.0 587.3023957118805 0.0 9.423032906489652 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3369 - 14 + 1 1.977 102553.2 1.0 3829 3462 7285 DOHH2_400M_050219_2,7293 DOHH2_400M_050219_2,7293,VKGKSGSG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7294 39.644 800.0 363550.0 25 0 22783.0 + 42203 VSERDVYLTY 10 178 622.811670094708 1243.608787256216 2 622.8116332888603 MULTI CID FTMS 0 0 0 7285 123448.53125 0.0865956820894043 -2 0.1834220886230468 9 Unmodified _VSERDVYLTY_ ENSG00000170638|ENST00000380909|TRABD;ENST00000463233.1_1_22:50624392-50636456:+|nuORF;ENST00000472677.1_1_22:50636123-50636456:+|nuORF;nc|ENSG00000170638|Q9H4I3-2|TRABD 104.48436234954404 0.0061796757808163 2 [{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DVY{I|L}TY 10 3 + 89.75 0.0 0.0 7.2169 7.2169 85.876 0.0 0.0 0.0 11.399859878055535 16.532125137753454 11.399859878055535 5.010912013506129 0 1.424742501084005 1.3010299956639813 1.2312958898387063 0.7783773187068795 [{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DVY{I|L}TY;[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DYV{I|L}TY;[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DVYT{I|L}Y;[VS]ERDVY{I|L}TY;[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DY{I|L}VTY;[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DYVT{I|L}Y;[VS]ERDYV{I|L}TY;[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DVY{I|L}TY;[Y{I|L}]{M(Oxidation (M))|F}YYV{I|L}TY;[Y{I|L}]{M(Oxidation (M))|F}YVY{I|L}TY 7.2169;6.814;6.3307;6.3002;5.9525;5.9278;5.8973;5.7115;5.5315;5.5315 -;-;-;+;-;-;-;-;-;- + 7339 1 1.977 211177.0 0.6399999856948853 3830 3462 7285 DOHH2_400M_050219_2,7294 DOHH2_400M_050219_2,7294,VSERDVYLTY True True VSERDVYLTY 39.644466 622.81163328886 18041484.0 7285.0 ENST00000472677.1_1_22:50636123-50636456:+|nuORF;;ENSG00000170638|ENST00000380909|TRABD;;nc|ENSG00000170638|Q9H4I3-2|TRABD;;ENST00000463233.1_1_22:50624392-50636456:+|nuORF 7.159165064493815 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7295 39.65 318.0 263820.0 25 0 31098.0 37198 TIGYGLSL 8 128 412.2307579612923 822.4469629893846 2 412.2302734255791 MULTI CID FTMS 0 0 0 7285 127000.7265625 0.8244949160664311 -2 0.1834220886230468 10 Unmodified _TIGYGLSL_ ENSG00000114812|ENST00000325123|VIPR1;ENST00000446673.5_1_3:42544163-42573332:+|nuORF;ENST00000473575.1_1_3:42555294-42568989:+|nuORF;nc|ENSG00000114812|P32241-2|VIPR1;nc|ENSG00000114812|P32241-4|VIPR1;nc|ENSG00000114812|P32241-5|VIPR1 2.577480529830294 0.808687252328423 2 P 1 8 9.6041 0.0 0.0 1.1677 0.0 0.0 707.3830343168245 0.0 707.3830343168245 0.0 4.097608893952831 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.1677 - 14 + 1 1.977 69999.6 1.0 3831 3462 7285 DOHH2_400M_050219_2,7295 DOHH2_400M_050219_2,7295,TIGYGLSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7296 39.665 800.0 64357.0 25 0 5653.0 -1 0 66 979.1206563756492 2934.340139727148 3 979.4540893435478 MULTI CID FTMS 0 0 0 7285 116154.3359375 1.0 0 0.0 11 2 N 1 -1 9.732 0.0 0.0 0.33166 0.0 0.0 1782.809086115623 1034.464584325754 2817.2736704413765 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 N 0.33166 - 28 + 1 1.977 44999.8 0.5400000214576721 3832 3462 7285 DOHH2_400M_050219_2,7296 DOHH2_400M_050219_2,7296, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7297 39.679 800.0 75534.0 25 0 6817.9 -1 0 81 727.3335622622454 726.3262857956454 1 727.3336059451103 MULTI CID FTMS 0 0 0 7285 99641.953125 0.5670352657979059 1 -0.0955810546875 12 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}GY 6 -1 + 60.287 0.0 0.0 8.3002 8.3002 97.073 0.0 0.0 0.0 9.384454040515834 9.384454040515834 9.384454040515834 24.719712763997563 0 1.613982988912431 1.3010299956639813 1.305462187404089 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}GY;[Y{I|L}][DP]GY;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{NN|[MP]|[D{I|L}]|[EV]}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{NN|[MP]|[D{I|L}]|[EV]}GY;{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))K]GY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{NN|[MP]|[D{I|L}]|[EV]}Y 8.3002;4.8969;3.8636;3.7625;2.8002;2.2736 -;-;-;-;-;- 110 1 1.977 53931.8 0.5899999737739563 3833 3462 7285 DOHH2_400M_050219_2,7297 DOHH2_400M_050219_2,7297, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7299 39.684 45.0 1052900.0 25 0 109380.0 + 38581 TTDFPGNYSGY 11 82 611.2563810020872 1220.4982090709743 2 611.2565795779228 MULTI CID FTMS 0 0 0 7298 1100267.875 0.9246402108170644 2 -0.2246170043945312 1 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 38.17557092003332 0.2405003631267018 2 [NG]PYS[DV]YSGY 11 7 [NG]PYS[DV]Y + + 20.802 13.185 1.4726 1.7044 1.7044 47.207 0.0 0.0 0.0 0.0 3.8168252646668286 0.0 0.0 0 0.0 0.0 0.0 0.0 [NG]PYS[DV]YSGY 1.7044 - 333 + 1 1.983 41904.6 1.0 3834 3463 7298 DOHH2_400M_050219_2,7299 DOHH2_400M_050219_2,7299,TTDFPGNYSGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7300 39.686 100.0 406970.0 25 0 33336.0 + 23386 LTDPIQGTEY 10 84 568.776524366477 1135.538495799754 2 568.7773925662041 MULTI CID FTMS 0 0 0 7298 378562.5625 0.9100342566165468 1 -0.1398735046386718 2 Unmodified _LTDPIQGTEY_ ENSG00000172175|ENST00000649217|MALT1;nc|ENSG00000172175|Q9UDY8-2|MALT1 45.69961567697781 0.105390671673896 2 EY 2 8 26.454 0.0 0.0 2.3296 0.0 0.0 825.4233967780727 0.0 825.4233967780727 0.0 -0.6593871989765887 -0.6593871989765887 0.0 0 0.5 0.0 0.5 0.0 + EY 2.3296 + + 206 + 1 1.983 35016.7 1.0 3835 3463 7298 DOHH2_400M_050219_2,7300 DOHH2_400M_050219_2,7300,LTDPIQGTEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7301 39.689 108.0 558430.0 25 0 75982.0 + 24451 MHIPTGVI 8 96 434.2428106256922 866.4710683181844 2 434.2430297732353 MULTI CID FTMS 0 0 0 7298 420086.875 1.0 0 0.0 3 Unmodified _MHIPTGVI_ REV__ENSG00000133059|ENST00000367162|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-3|DSTYK 2.889219685676258 0.8067950007271085 2 S 1 -1 5.7268 0.0 0.0 0.66094 0.0 0.0 433.282352097618 343.1400240533813 776.4223761509993 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 S 0.66094 - 2 + 1 1.983 53720.7 1.0 3836 3463 7298 DOHH2_400M_050219_2,7301 DOHH2_400M_050219_2,7301,MHIPTGVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7302 39.693 213.0 323620.0 25 0 43947.0 20659 LLQKMVAQ 8 105 465.7772019834701 0 465.7773620486259 PEAK CID FTMS 0 0 0 7298 270794.59375 0.924706458849709 2 -0.2246170043945312 4 Unmodified _LLQKMVAQ_ ENSG00000167094|ENST00000373289|TTC16;ENST00000488285.1_1_9:130482605-130486777:+|nuORF;nc|ENSG00000167094|Q8NEE8-2|TTC16 5.230669730166228 0.5807325378471833 2 {I|L} 1 7 6.9897 0.0 0.0 0.75195 0.0 0.0 464.2812583597151 349.15143762760005 813.4326959873151 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.75195 + + 4 + 1 1.983 58929.7 1.0 3837 3463 7298 DOHH2_400M_050219_2,7302 DOHH2_400M_050219_2,7302,LLQKMVAQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7303 39.695 100.0 623340.0 25 0 93327.0 + 11317 GEWASGGVRSF 11 86 576.775884597574 1151.5372162619478 2 576.7744628787041 MULTI CID FTMS 0 0 0 7298 265118.3125 0.1325407165228137 -1 0.0955810546875 5 Unmodified _GEWASGGVRSF_ ENSG00000126432|ENST00000265462|PRDX5;nc|ENSG00000126432|P30044-3|PRDX5;nc|ENSG00000126432|P30044-4|PRDX5 14.95716135407024 0.7240205813188479 2 WADASR 6 8 48.537 0.0 0.0 4.215 0.0 0.0 0.0 462.19172083072505 462.19172083072505 34.55767843264759 0.0 0.0 0.0 0 1.1677353201839438 1.0969100130080565 0.3494850021680094 0.0 WADASR 4.215 - 378 + 1 1.983 51622.9 1.0 3838 3463 7298 DOHH2_400M_050219_2,7303 DOHH2_400M_050219_2,7303,GEWASGGVRSF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7304 39.704 510.0 320460.0 25 0 36491.0 + + 19866 HLILRAEGL 9 138 510.81006496474544 1019.6055769962908 2 511.3112975955009 MULTI CID FTMS 0 0 0 7298 225415.375 1.0 0 0.0 6 Unmodified _LHLVSELPL_ ENSG00000163832|ENST00000296149|ELP6;nc|ENSG00000163832|Q0PNE2-2|ELP6 9.347437153973935 0.588369872918737 2 [H{I|L}]{I|L} 3 -1 25.942 0.0 0.0 2.5443 0.0 0.0 0.0 653.3566807455063 653.3566807455063 13.239087409443185 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [H{I|L}]{I|L} 2.5443 + + 142 1 1.983 127368.7 1.0 3839 3463 7298 DOHH2_400M_050219_2,7304 DOHH2_400M_050219_2,7304,LHLVSELPL False False HLILRAEGL 39.703876 511.311297595501 1857280.875 7298.0 ENSG00000163832|ENST00000296149|ELP6;;nc|ENSG00000163832|Q0PNE2-2|ELP6 4.579511006673177 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7305 39.711 403.0 272770.0 25 0 39070.0 -1 0 79 905.4482018234356 1808.8818507136712 2 905.4481078982352 MULTI CID FTMS 0 0 0 7298 222182.515625 0.3361653734332616 3 -0.3275108337402344 7 2 [H{I|L}]P{[QV]|[N{I|L}]|[RA]|[KV]}NEER 9 -1 48.835 0.0 0.0 2.6997 0.0 0.0 0.0 703.3150118463499 703.3150118463499 22.904849854573683 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.4247425010840047 [H{I|L}]P{[QV]|[N{I|L}]|[RA]|[KV]}NEER 2.6997 - 194 + 1 1.983 79962.3 1.0 3840 3463 7298 DOHH2_400M_050219_2,7305 DOHH2_400M_050219_2,7305, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7306 39.725 800.0 221290.0 25 0 54829.0 + 30504 REFPDRLVGY 10 133 626.3275432768801 1250.64053362056 2 626.3278076052666 MULTI CID FTMS 0 0 0 7298 208337.9375 0.3852729064626984 8 -0.7962303161621094 8 Unmodified _REFPDRLVGY_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 34.79049567835207 0.2125782580530075 2 [VG]E{M(Oxidation (M))|F} 4 9 37.862 0.0 0.0 3.0274 0.0 0.0 0.0 815.4047583222388 815.4047583222388 15.65552802072581 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.0 0.0 [VG]E{M(Oxidation (M))|F} 3.0274 - 235 + 1 1.983 133963.0 0.800000011920929 3841 3463 7298 DOHH2_400M_050219_2,7306 DOHH2_400M_050219_2,7306,REFPDRLVGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7307 39.728 163.0 556070.0 25 0 38314.0 + 900 AEYDRPNLL 9 112 545.7821318007166 0 545.7823974490166 PEAK CID FTMS 0 0 0 7298 205366.6875 1.0 0 0.0 9 Unmodified _AEYDRPNLL_ ENSG00000006715|ENST00000310301|VPS41;nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41 41.95555342248728 0.0536712386667488 2 YDR 3 6 23.491 0.0 0.0 2.1561 0.0 0.0 200.08391663116527 452.2508028619751 652.3347194931404 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.25 0.2887254899964357 + YDR 2.1561 + + 568 + 1 1.983 71503.6 1.0 3842 3463 7298 DOHH2_400M_050219_2,7307 DOHH2_400M_050219_2,7307,AEYDRPNLL True True AEYDRPNLL 39.728147 545.782397449017 600785.9375 7298.0 nc|ENSG00000006715|P49754-3|VPS41;;nc|ENSG00000006715|P49754-2|VPS41;;ENSG00000006715|ENST00000310301|VPS41 5.717963695526123 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7308 39.742 800.0 176060.0 25 0 22858.0 + -1 NMFCTRLSRCF 11 122 746.3356923370286 1490.6568317408571 2 746.3357421755791 MULTI CID FTMS 0 0 0 7298 176061.703125 0.3658053256276229 2 -0.2246170043945312 10 2 Carbamidomethyl (C) _NMFC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 8.745405648335112 0.8338865417133445 2 [MN]PN{I|L}NADQRGD{M(Oxidation (M))|F} 13 -1 + 89.396 0.0 0.0 5.9971 5.9971 85.845 0.0 0.0 0.0 52.48043141304652 4.451107134741605 4.451107134741605 9.072459467631006 0 1.2231975075880328 1.5228787452803376 0.2614393726401688 1.566901560044258 [MN]PN{I|L}NADQRGD{M(Oxidation (M))|F};[MN]PGG{I|L}NADQRGD{M(Oxidation (M))|F};[MN]PN{I|L}NAD[AG]RGD{M(Oxidation (M))|F};[MN]PN{I|L}GGADQRGD{M(Oxidation (M))|F};[MN]PN{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PN{I|L}NADV{[QG]|[NA]}GD{M(Oxidation (M))|F};[MN]PN{I|L}NWQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PN{I|L}NWV{[QG]|[NA]}GD{M(Oxidation (M))|F};[MN]PGG{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PN{I|L}GGADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]} 5.9971;5.3885;5.3885;5.3885;5.3533;5.1215;5.1097;4.8762;4.7447;4.7447 -;-;-;-;-;-;-;-;-;- 1960 + 1 1.983 100004.4 0.7099999785423279 3843 3463 7298 DOHH2_400M_050219_2,7308 DOHH2_400M_050219_2,7308,NMFCTRLSRCF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7309 39.756 800.0 126040.0 25 0 7997.1 + 31307 RMDENSPLMY 10 128 628.2754749284466 1254.536396923693 2 628.2765991091728 MULTI CID FTMS 0 0 0 7298 102328.84375 1.0 0 0.0 11 Unmodified _RMDENSPLMY_ ENSG00000150995|ENST00000649015|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1 21.59015148037692 0.4836074274810599 2 SP{I|L}MY 5 5 45.305 0.0 0.0 3.6113 0.0 0.0 645.2540760724625 0.0 645.2540760724625 0.0 33.0866814795592 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 + SP{I|L}MY 3.6113 + + 277 1 1.983 81894.6 0.5799999833106995 3844 3463 7298 DOHH2_400M_050219_2,7309 DOHH2_400M_050219_2,7309,RMDENSPLMY False True RMDENSPLMY 39.755826 628.2767 850529.0625 7298.0 nc|ENSG00000150995|Q14643-3|ITPR1;;nc|ENSG00000150995|Q14643-4|ITPR1;;nc|ENSG00000150995|Q14643-2|ITPR1;;nc|ENSG00000150995|Q14643-6|ITPR1;;nc|ENSG00000150995|Q14643-7|ITPR1;;nc|ENSG00000150995|Q14643-5|ITPR1;;nc|ENSG00000150995|Q14643-8|ITPR1;;ENSG00000150995|ENST00000649015|ITPR1 5.899021148681641 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7310 39.766 507.0 236670.0 25 0 28484.0 + 5145 DIIKKPIAL 9 135 505.83372262359137 1009.6528923139828 2 505.8342468142509 MULTI CID FTMS 0 0 0 7298 102602.84375 0.56126752822628 -1 0.0955810546875 12 Unmodified _DIIKKPIAL_ ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A 41.8396318013385 0.0653578398400075 2 {I|L}D{I|L}KK[{I|L}P]A{I|L} 9 2 + 73.853 0.0 0.0 7.3147 7.3147 95.526 0.0 0.0 0.0 42.24932183384787 1.821355998091434 1.821355998091434 24.31712829830282 0 1.4802046884880935 2.0 0.0 0.0 {I|L}D{I|L}KK[{I|L}P]A{I|L};{I|L}D{I|L}KKVVPV 7.3147;4.9063 -;- 680 + 1 1.983 94786.2 1.0 3845 3463 7298 DOHH2_400M_050219_2,7310 DOHH2_400M_050219_2,7310,DIIKKPIAL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7311 39.78 800.0 132300.0 25 0 6561.7 + 434 AEEPLAGRTW 10 147 565.2851966450795 1128.555840356959 2 565.2858154177666 MULTI CID FTMS 0 0 0 7298 95024.1015625 0.0828951703674334 9 -0.8506965637207031 13 Unmodified _AEEPLAGRTW_ ENST00000529704.5_1_11:67119307-67120167:-|nuORF;ENST00000534515.1_1_11:67119307-67119526:-|nuORF 26.020703789607367 0.3840598856887971 2 {[CP]|[EA]}EP{I|L}A 6 4 36.075 0.0 0.0 3.1966 0.0 0.0 0.0 515.2374319364476 515.2374319364476 22.58024070117017 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + {[CP]|[EA]}EP{I|L}A 3.1966 + + 514 + 1 1.983 83948.6 0.4799999892711639 3846 3463 7298 DOHH2_400M_050219_2,7311 DOHH2_400M_050219_2,7311,AEEPLAGRTW False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7312 39.794 800.0 115410.0 25 0 5928.3 -1 0 124 910.4217595233204 1818.8289661134409 2 910.922900378704 MULTI CID FTMS 0 0 0 7298 91354.0078125 0.0336397631483448 -11 0.7613906860351562 14 2 [NP]{I|L}NW[H{I|L}][CS]AN{I|L}DP[EP] 16 -1 + 69.139 0.0 0.0 3.8013 3.8013 75.812 0.0 0.0 0.0 15.985994592184554 40.14313464437279 15.985994592184554 6.709412807357751 0 0.3807196863200844 1.154901959985743 0.4247425010840047 0.3494850021680094 [NP]{I|L}NW[H{I|L}][CS]AN{I|L}DP[EP];[NP]{I|L}NW[H{I|L}]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}N{I|L}DP[EP];[NP]{I|L}NW[H{I|L}][CS]Y{I|L}H[WH] 3.8013;3.4324;2.6218 -;-;- 454 1 1.983 67344.9 0.4799999892711639 3847 3463 7298 DOHH2_400M_050219_2,7312 DOHH2_400M_050219_2,7312, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7313 39.809 800.0 101470.0 25 0 3852.6 + 9739 FMDPEMETRY 10 134 659.7757323081793 1317.5369116831585 2 659.7747680544853 MULTI CID FTMS 0 0 0 7298 82275.546875 0.2699545956778021 2 -0.2246170043945312 15 Unmodified _FMDPEMETRY_ ENSG00000138031|ENST00000679454|ADCY3;nc|ENSG00000138031|O60266-2|ADCY3 26.020703789607367 0.3840598856887971 2 EPD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 5 7 25.783 0.0 0.0 1.9569 0.0 0.0 698.305955955275 0.0 698.305955955275 0.0 11.80400924012389 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 EPD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 1.9569 - 360 1 1.983 65078.1 0.4799999892711639 3848 3463 7298 DOHH2_400M_050219_2,7313 DOHH2_400M_050219_2,7313,FMDPEMETRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7314 39.81 49.0 1174100.0 25 0 104790.0 + 35208 SSDNIMVQY 9 90 528.7366296764621 1055.4587064197242 2 528.7363769412041 MULTI CID FTMS 0 0 0 7298 164874.90625 0.1062000792918101 -2 0.1849403381347656 16 Unmodified _SSDNIMVQY_ ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2 68.08070601005525 0.0218408846571049 2 [DN]SS{I|L}M 6 7 38.829 0.0 0.0 3.6789 0.0 0.0 0.0 405.1787283582671 405.1787283582671 15.24578102350123 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5866968715561641 1.1861818737241734 [DN]SS{I|L}M 3.6789 - 284 1 1.983 51437.5 1.0 3849 3463 7298 DOHH2_400M_050219_2,7314 DOHH2_400M_050219_2,7314,SSDNIMVQY True True SSDNIMVQY 39.810232 528.736376941204 20620168.0 7298.0 ENSG00000158623|ENST00000425248|COPG2;;nc|ENSG00000158623|Q9UBF2-2|COPG2;;ENSG00000181789|ENST00000314797|COPG1 7.118299166361491 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7315 39.819 495.0 190860.0 25 0 16864.0 + 34424 SLVSTLLEL 9 126 487.7898952339078 973.5652375346156 2 487.7897216677666 MULTI CID FTMS 0 0 0 7298 126866.421875 0.5528979702846275 2 -0.2246170043945312 17 Unmodified _SLVSTLLEL_ REV__ENSG00000065060|ENST00000192788|BLTP3A 12.531546534597751 0.4974689918368763 2 {I|L} 1 -1 11.783 0.0 0.0 1.2103 0.0 0.0 842.4701733029735 0.0 842.4701733029735 0.0 1.1868045789730175 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2103 + + 78 + 1 1.983 77093.4 1.0 3850 3463 7298 DOHH2_400M_050219_2,7315 DOHH2_400M_050219_2,7315,SLVSTLLEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7317 39.824 50.0 995670.0 25 0 134360.0 + 35537 STPDHSFSL 9 79 495.7299089271846 989.4452649211692 2 495.7299987673759 MULTI CID FTMS 0 0 0 7316 640795.1875 0.3707447009702108 1 -0.0847434997558593 1 Unmodified _STPDHSFSL_ ENSG00000128272|ENST00000674920|ATF4 28.486842064014134 0.1687311288560894 2 [WY]S{M(Oxidation (M))|F}S{I|L}{[MG]|[TS]} 8 7 + 39.117 0.0 0.0 3.9535 3.9535 81.15 0.0 0.0 0.0 5.440680443502757 9.451687839877891 5.440680443502757 11.03531276083039 0 0.0 0.0 1.274227503252014 0.0 [WY]S{M(Oxidation (M))|F}S{I|L}{[MG]|[TS]};{[MG]|[TS]}[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}S{I|L}{[MG]|[TS]};[HS][DP]{M(Oxidation (M))|F}S{I|L}{[MG]|[TS]};[YR]S[{M(Oxidation (M))|F}T][WM];[WY]S{[ES]|[DT]|[{I|L}C]}[YR];AA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}S{I|L}{[MG]|[TS]};[YR]{[YD]|[{M(Oxidation (M))|F}M]}{[CA]|SS}S{I|L};{[MG]|[TS]}[{M(Oxidation (M))|F}T]{[ES]|[DT]|[{I|L}C]}[YR];[YR]{[YD]|[{M(Oxidation (M))|F}M]}{[CA]|SS}TV;{[MG]|[TS]}[HV]{[ET]|[MV]}[WM] 3.9535;2.8382;2.1633;1.5898;1.4648;1.4524;0.4405;0.34256;0.21628;0.19043 -;-;-;-;-;-;-;-;-;- 142 1 1.986 44558.8 1.0 3851 3464 7316 DOHH2_400M_050219_2,7317 DOHH2_400M_050219_2,7317,STPDHSFSL False True STPDHSFSL 39.824163 495.729998767376 25286364.0 7316.0 ENSG00000128272|ENST00000674920|ATF4 3.739140510559082 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7318 39.826 73.0 729110.0 25 0 86643.0 -1 0 63 603.9673254404012 1808.880146921404 3 604.3018066287041 MULTI CID FTMS 0 0 0 7316 621135.1875 0.3227008429114295 4 -0.4165458679199219 2 2 ME[EC]G{M(Oxidation (M))|F}{I|L}H{I|L}Q 10 -1 40.138 0.0 0.0 2.2189 0.0 0.0 603.3471546857437 0.0 603.3471546857437 0.0 16.670175336041453 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 ME[EC]G{M(Oxidation (M))|F}{I|L}H{I|L}Q 2.2189 - 125 1 1.986 46802.3 1.0 3852 3464 7316 DOHH2_400M_050219_2,7318 DOHH2_400M_050219_2,7318, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7319 39.827 35.0 1459600.0 25 0 127660.0 + 16634 KEIGDVENW 9 89 545.2642527960139 0 545.2645141482353 PEAK CID FTMS 0 0 0 7316 1357653.375 1.0 0 0.0 3 Unmodified _KEIGDVENW_ ENSG00000135441|ENST00000548925|BLOC1S1;nc|ENSG00000135441|P78537-2|BLOC1S1 57.72198328787511 0.0192479126618854 2 NEVWVE 6 6 38.053 0.0 0.0 3.4958 0.0 0.0 204.09605373011965 125.07235132388908 329.1684050540087 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.1861818737241734 0.3807196863200844 NEVWVE 3.4958 - 171 + 1 1.986 49266.5 1.0 3853 3464 7316 DOHH2_400M_050219_2,7319 DOHH2_400M_050219_2,7319,KEIGDVENW True True KEIGDVENW 39.827048 545.264514148235 17225572.0 7316.0 ENSG00000135441|ENST00000548925|BLOC1S1;;nc|ENSG00000135441|P78537-2|BLOC1S1 5.166948159535726 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7320 39.829 83.0 740530.0 25 0 115230.0 14955 ILMVNQPV 8 91 457.2642121021641 912.5138712711282 2 457.2642700076103 MULTI CID FTMS 0 0 0 7316 609779.75 0.8541358433453318 3 -0.3033790588378906 4 Unmodified _ILMVNQPV_ chr16:28986446-28986657|12|15.0|0.21|6.17|+|0|LAT,LAT|1 5.760428011301431 0.7893668129297577 2 {I|L} 1 7 9.2082 0.0 0.0 1.0091 0.0 0.0 781.4197225668298 0.0 781.4197225668298 0.0 8.494850021680092 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0091 + + 5 + 1 1.986 53379.3 1.0 3854 3464 7316 DOHH2_400M_050219_2,7320 DOHH2_400M_050219_2,7320,ILMVNQPV False False False False splicing PXD020620_cell_line DOHH2_400M_050219_2 7321 39.831 90.0 651170.0 25 0 155970.0 + 37258 TIMPRGPTL 9 70 493.2783123285221 984.5420717238442 2 493.2787353396416 MULTI CID FTMS 0 0 0 7316 442930.625 0.7448600756475112 -1 0.1398735046386718 5 Unmodified _TIMPRGPTL_ ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1 18.1463463914782 0.3454829746528889 2 [{I|L}T]MP 4 5 38.06 0.0 0.0 3.8657 0.0 0.0 0.0 539.2948092096311 539.2948092096311 24.564856298445576 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}T]MP 3.8657 + + 18 + 1 1.986 49102.2 1.0 3855 3464 7316 DOHH2_400M_050219_2,7321 DOHH2_400M_050219_2,7321,TIMPRGPTL False True TIMPRGPTL 39.830894 493.278735339642 9316696.0 7316.0 nc|ENSG00000136758|Q96TA2|YME1L1;;nc|ENSG00000136758|Q96TA2-3|YME1L1;;ENSG00000136758|ENST00000376016|YME1L1 4.404765208562215 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7322 39.836 292.0 311200.0 25 0 25677.0 -1 0 94 964.4444617022658 2890.3115557069973 3 964.7803832888604 MULTI CID FTMS 0 0 0 7316 420280.90625 0.6933333436438979 1 -0.0847434997558593 6 2 [NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}D 6 -1 17.579 0.0 0.0 0.6082 0.0 0.0 0.0 2169.993415408422 2169.993415408422 2.8862778287721387 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.3807196863200844 [NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}D 0.6082 - 582 1 1.986 69265.8 1.0 3856 3464 7316 DOHH2_400M_050219_2,7322 DOHH2_400M_050219_2,7322, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7323 39.84 168.0 325180.0 25 0 32113.0 + 34510 SNEDEVEGEE 10 95 568.7151444354577 1135.4157359377152 2 568.7161132693291 MULTI CID FTMS 0 0 0 7316 249041.046875 0.9962805655235604 -1 0.1398735046386718 7 Unmodified _SNEDEVEGEE_ REV__ENSG00000074356|ENST00000389005|NCBP3;REV__ENST00000575815.5_1_17:3728158-3732552:-|nuORF 5.731851221503515 0.7001233259664787 2 [NS]E{I|L}S 5 -1 23.178 0.0 0.0 2.0414 0.0 0.0 0.0 602.1582035492964 602.1582035492964 4.594768576111527 0.0 0.0 0.0 0 0.0 0.6575773191777937 0.8441876774005248 0.0 [NS]E{I|L}S 2.0414 - 221 1 1.986 46412.9 1.0 3857 3464 7316 DOHH2_400M_050219_2,7323 DOHH2_400M_050219_2,7323,SNEDEVEGEE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7324 39.844 213.0 345300.0 25 0 47940.0 + 14297 IEKPPVGTW 9 98 513.7844060811921 1025.554259229184 2 513.7847778201103 MULTI CID FTMS 0 0 0 7316 232200.71875 0.5924666138553547 -1 0.1398735046386718 8 Unmodified _IEKPPVGTW_ ENSG00000122122|ENST00000356892|SASH3 51.629811660486645 0.0367964933207742 2 {I|L}EKP[RP]TW 8 2 + 75.979 0.0 0.0 7.4086 7.4086 95.605 0.0 0.0 0.0 38.43413003545859 14.024174299985006 14.024174299985006 23.82190971075161 0 0.7302046884880937 1.6989700043360187 1.2302046884880935 0.0 {I|L}EKP[RP]TW;{I|L}EKP[HA]G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{I|L}EKP[HQ]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{I|L}{M(Oxidation (M))|F}KWTG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{I|L}{M(Oxidation (M))|F}WKTG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]PGTWKE{I|L};{I|L}{M(Oxidation (M))|F}K{[DA]|[EG]}TG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]PGTKWE{I|L};{I|L}{M(Oxidation (M))|F}{[DA]|[EG]}KTG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[TV]|[{I|L}S]}[PG]PWKE{I|L} 7.4086;5.0858;4.9193;4.5795;4.5529;3.6936;3.6764;3.667;3.6498;3.1631 -;-;-;-;-;-;-;-;-;- 535 + 1 1.986 58578.1 1.0 3858 3464 7316 DOHH2_400M_050219_2,7324 DOHH2_400M_050219_2,7324,IEKPPVGTW True True IEKPPVGTW 39.843628 513.78477782011 2988261.5 7316.0 ENSG00000122122|ENST00000356892|SASH3 6.869803428649902 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7325 39.85 342.0 265760.0 25 0 15587.0 + -1 NMWPWHKVNMF 11 100 753.3439006338228 1504.6732483344456 2 753.3432494997978 MULTI CID FTMS 0 0 0 7316 227483.25 1.0 0 0.0 9 Oxidation (M) _NMWPWHKVNM(Oxidation (M))F_ REV__ENSG00000006788|ENST00000252172|MYH13 13.90604991867851 0.7458848613461305 2 [MN]PN{I|L}NEKCH{I|L}S 12 -1 72.15 0.0 0.0 4.7951 0.0 0.0 0.0 121.04107843570546 121.04107843570546 55.26593150440647 0.0 0.0 0.0 0 1.0044321917401078 1.5228787452803376 0.0 0.805462187404089 [MN]PN{I|L}NEKCH{I|L}S 4.7951 - 959 + 1 1.986 68489.9 1.0 3859 3464 7316 DOHH2_400M_050219_2,7325 DOHH2_400M_050219_2,7325,NMWPWHKVNMF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7326 39.857 388.0 338690.0 25 0 19031.0 + 5478 DLRTKATIEL 10 150 580.3377408567709 1158.6609287803417 2 580.3373901247978 MULTI CID FTMS 0 0 0 7316 211491.015625 0.7577912603965584 -1 0.1398735046386718 10 Unmodified _DLRTKATIEL_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 61.08992128646608 0.0337271188422265 2 [{I|L}T]AK[RD]T{I|L}E{I|L} 10 5 + 65.927 0.0 0.0 5.6899 5.6899 82.392 0.0 0.0 0.0 6.4002805813900565 12.385606273598311 6.4002805813900565 6.4002805813900565 0 0.9802046884880938 1.5228787452803376 1.9291746928241125 0.0 [{I|L}T]AK[RD]T{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}R[KT]AT{I|L}E{I|L};[{I|L}T]AK[RD]TE{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}R[KT]ATE{I|L}{I|L};[{I|L}T]AK[RD]ET{I|L}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}TA{[TV]|[{I|L}S]}KA[VP];{I|L}{M(Oxidation (M))|F}{I|L}TA{[TV]|[{I|L}S]}K[PG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}R[KT]AET{I|L}{I|L};[TA]{I|L}K[RD]T{I|L}E{I|L};{I|L}{M(Oxidation (M))|F}{I|L}TA{[TV]|[{I|L}S]}K{I|L}[PG] 5.6899;5.1375;5.0448;4.4924;4.119;3.8411;3.8263;3.5666;3.3867;3.039 -;+;-;-;-;-;-;-;-;- + 1047 1 1.986 100350.3 1.0 3860 3464 7316 DOHH2_400M_050219_2,7326 DOHH2_400M_050219_2,7326,DLRTKATIEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7327 39.86 152.0 342680.0 25 0 51391.0 + 22913 LSDLGKLSY 9 96 498.27362500157454 994.5326970699492 2 498.2737304568291 MULTI CID FTMS 0 0 0 7316 209447.703125 1.0 0 0.0 11 Unmodified _LSDLGKLSY_ ENSG00000103510|ENST00000219797|KAT8;ENST00000538768.2_1_16:31138259-31142577:+|nuORF;nc|ENSG00000103510|Q9H7Z6-2|KAT8 41.95555342248728 0.0647214845423414 2 {I|L}SD{I|L} 4 5 59.68 0.0 0.0 6.0009 0.0 0.0 0.0 563.2825562945318 563.2825562945318 30.23886815013292 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {I|L}SD{I|L} 6.0009 + + 351 + 1 1.986 45293.6 1.0 3861 3464 7316 DOHH2_400M_050219_2,7327 DOHH2_400M_050219_2,7327,LSDLGKLSY True True LSDLGKLSY 39.859817 498.273730456829 1404442.5 7316.0 ENST00000538768.2_1_16:31138259-31142577:+|nuORF;;ENSG00000103510|ENST00000219797|KAT8;;nc|ENSG00000103510|Q9H7Z6-2|KAT8 2.779490232467652 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7328 39.864 247.0 265700.0 25 0 22381.0 + 43732 AEMPGQGPGSDW 12 100 616.2571184702049 1230.4996840072097 2 616.2576782107353 MULTI CID FTMS 0 0 0 7316 186747.34375 1.0 0 0.0 12 Unmodified _YDLCGTPHYY_ ENST00000538285.6_1_12:110906680-110924532:+|nuORF;ENSG00000204856|ENST00000377673|FAM216A 21.74664581756881 0.480091245866545 2 {[{M(Oxidation (M))|F}C]|[YS]}Y{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}SYY 9 6 + 50.34 0.0 0.0 4.091 4.091 76.407 0.0 0.0 0.0 0.7378621416091846 31.64320017660792 0.7378621416091846 6.524939065189258 0 0.9247425010840048 0.0 1.0 0.0 {[{M(Oxidation (M))|F}C]|[YS]}Y{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}SYY;[QA]Y[HN]GESYY;{[{M(Oxidation (M))|F}C]|[YS]}Y{M(Oxidation (M))|F}YYYY;[QA]Y[HN]WSYY;[QA]Y[HN]G{M(Oxidation (M))|F}[MT]Y;[PG]QG[TP]{[{M(Oxidation (M))|F}D]|MM}SYY;{[{M(Oxidation (M))|F}C]|[YS]}Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[ES]|[DT]|[{I|L}C]}YY;[QA]Y[HN]G{M(Oxidation (M))|F}Y[MT];[PG]Q{[YD]|[{M(Oxidation (M))|F}M]}YYYY;[PG][SG]D{M(Oxidation (M))|F}YYYY 4.091;3.5607;3.3235;3.2709;2.8958;2.5713;2.4635;2.4075;2.3443;2.3071 -;-;-;-;-;-;-;-;-;- 495 1 1.986 55758.7 1.0 3862 3464 7316 DOHH2_400M_050219_2,7328 DOHH2_400M_050219_2,7328,YDLCGTPHYY False False AEMPGQGPGSDW 39.86444 616.257678210735 1565975.375 7316.0 ENST00000538285.6_1_12:110906680-110924532:+|nuORF;;ENSG00000204856|ENST00000377673|FAM216A 3.4336461226145425 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7329 39.87 295.0 387650.0 25 0 22780.0 + 7821 ELKEKYISL 9 136 561.8238648513403 1121.6331767694803 2 561.8239013552666 MULTI CID FTMS 0 0 0 7316 133418.890625 0.4432160525970477 -1 0.1398735046386718 13 Unmodified _ELKEKYISL_ ENSG00000179562|ENST00000321407|GCC1 61.60191391372663 0.0251951588191061 2 [Y{I|L}]T[VG]KE{I|L}S{I|L} 10 5 + 38.539 0.0 0.0 3.4359 3.4359 66.235 0.0 0.0 0.0 0.1098866067231014 7.3396067924996835 0.1098866067231014 0.1098866067231014 0 1.5172203223519531 1.2218487496163564 0.7134679910804405 0.0 [Y{I|L}]T[VG]KE{I|L}S{I|L};{[TV]|[{I|L}S]}GY{I|L}KE{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}KYKE{I|L}S{I|L};{[TV]|[{I|L}S]}GYK{I|L}E{I|L}S{I|L};[{I|L}T]Y[VG]KE{I|L}S{I|L};[Y{I|L}]T[VG]KEVT{I|L};{[TV]|[{I|L}S]}GY{I|L}KEVT{I|L};{[QN]|[E{I|L}]|[KN]}KYKEVT{I|L};{[TV]|[{I|L}S]}GYK{I|L}EVT{I|L};[Y{I|L}][SG]{I|L}KE{I|L}S{I|L} 3.4359;3.4261;3.3488;3.3288;2.9914;2.8282;2.8184;2.741;2.721;2.5876 -;-;-;-;-;-;-;-;-;- 1787 1 1.986 88909.1 1.0 3863 3464 7316 DOHH2_400M_050219_2,7329 DOHH2_400M_050219_2,7329,ELKEKYISL True True ELKEKYISL 39.869853 561.823901355267 2122193.0 7316.0 ENSG00000179562|ENST00000321407|GCC1 4.967528820037842 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7330 39.879 540.0 204350.0 25 0 40581.0 23835 LVGNPRGALPL 11 114 553.8372066816954 1105.6598604301907 2 553.8384887576103 MULTI CID FTMS 0 0 0 7316 120414.2578125 1.0 0 0.0 14 Unmodified _LVGNPRGALPL_ ENSG00000146828|ENST00000354161|SLC12A9;nc|ENSG00000146828|Q9BXP2-2|SLC12A9;nc|ENSG00000146828|Q9BXP2-3|SLC12A9;nc|ENSG00000146828|Q9BXP2-4|SLC12A9 18.1463463914782 0.6576820063886638 2 {I|L}VG 3 8 37.797 0.0 0.0 3.4185 0.0 0.0 0.0 833.4527280349376 833.4527280349376 18.332567493688344 0.0 0.0 0.0 0 0.2134679910804404 1.3979400086720375 0.0 0.0 + {I|L}VG 3.4185 + + 300 + 1 1.986 87343.0 1.0 3864 3464 7316 DOHH2_400M_050219_2,7330 DOHH2_400M_050219_2,7330,LVGNPRGALPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7331 39.894 800.0 192030.0 25 0 13759.0 + 13616 HPPSHWPL 8 171 485.7484329851038 0 485.7485534548759 PEAK CID FTMS 0 0 0 7316 116522.5 1.0 0 0.0 15 Unmodified _HPPSHWPL_ ENSG00000168036|ENST00000349496|CTNNB1 56.541270873467816 0.0676047439469011 2 WHSCE 5 7 34.421 0.0 0.0 3.5504 0.0 0.0 228.1463235160158 96.08250604801016 324.22882956402594 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 1.7376954943324543 0.0 WHSCE 3.5504 - 328 + 1 1.986 116409.9 0.5299999713897705 3865 3464 7316 DOHH2_400M_050219_2,7331 DOHH2_400M_050219_2,7331,HPPSHWPL True True HPPSHWPL 39.894346 485.748553454876 2127612.0 7316.0 ENSG00000168036|ENST00000349496|CTNNB1 4.6776479085286455 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7332 39.9 287.0 157320.0 25 0 10657.0 37759 TLRPGARE 8 94 450.2557495933007 898.4969462534013 2 450.2562438845634 MULTI CID FTMS 0 0 0 7316 109918.4921875 0.6311147911573746 3 -0.3033790588378906 16 Unmodified _TLRPGARE_ ENST00000376259.6_1_1:12227075-12248914:+|nuORF 5.230669730166228 0.792582437072536 2 {I|L} 1 7 10.969 0.0 0.0 1.2208 0.0 0.0 767.4019735744936 0.0 767.4019735744936 0.0 1.365006360318688 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2208 + + 11 + 1 1.986 39885.3 1.0 3866 3464 7316 DOHH2_400M_050219_2,7332 DOHH2_400M_050219_2,7332,TLRPGARE False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7333 39.904 218.0 232560.0 25 0 14929.0 + + 41923 PLDHLKPLEY 10 82 408.89241797356055 1223.6554245208818 3 408.8921081423759 MULTI CID FTMS 0 0 0 7316 138061.609375 0.7347864502708275 -1 0.1398735046386718 17 Unmodified _VQGYKKEYIP_ ENSG00000135763|ENST00000258243|URB2 18.1463463914782 0.5430639438673815 2 [{I|L}P]DH{I|L}KE 7 -1 39.742 0.0 0.0 3.2478 0.0 0.0 0.0 388.1882974059005 388.1882974059005 22.751991628826147 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.5 0.3807196863200844 [{I|L}P]DH{I|L}KE 3.2478 - 138 1 1.986 50150.5 1.0 3867 3464 7316 DOHH2_400M_050219_2,7333 DOHH2_400M_050219_2,7333,VQGYKKEYIP False False PLDHLKPLEY 39.903717 408.892108142376 1628349.875 7316.0 ENSG00000135763|ENST00000258243|URB2 4.626564105351766 3.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7335 39.909 20.0 2584400.0 25 0 522700.0 + 44116 YLDDPDLKY 9 55 571.2739964826986 1140.5334400321972 2 571.2746459841728 MULTI CID FTMS 0 0 0 7334 2257674.5 0.4711968612679298 1 -0.1028938293457031 1 Unmodified _YLDDPDLKY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 26.268140514670165 0.1969607489560049 2 Y{I|L}DD[DP]{I|L}KY 9 0 + 74.659 0.0 0.0 6.5459 6.5459 94.91 0.0 0.0 0.0 55.27310937020445 13.46787486224656 13.46787486224656 74.65858457933251 0 0.3054621874040891 2.0 0.0 0.0 + + Y{I|L}DD[DP]{I|L}KY 6.5459 + + 62 + 1 1.986 46742.9 1.0 3868 3465 7334 DOHH2_400M_050219_2,7335 DOHH2_400M_050219_2,7335,YLDDPDLKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7336 39.91 73.0 813230.0 25 0 57094.0 + 42204 VSERDVYLTY 10 77 622.811670094708 1243.608787256216 2 622.8116332888603 MULTI CID FTMS 0 0 0 7334 686467.0625 0.4815373897702591 1 -0.1028938293457031 2 Unmodified _VSERDVYLTY_ ENSG00000170638|ENST00000380909|TRABD;ENST00000463233.1_1_22:50624392-50636456:+|nuORF;ENST00000472677.1_1_22:50636123-50636456:+|nuORF;nc|ENSG00000170638|Q9H4I3-2|TRABD 30.7034409873982 0.2788461460996952 2 [{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DVY{I|L}TY 10 3 + 73.02 0.0 0.0 5.8717 5.8717 58.973 0.0 0.0 0.0 7.82120227101629 16.53212513775344 7.82120227101629 0.0 0 1.3807196863200843 1.3010299956639813 0.3807196863200844 0.0 [{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DVY{I|L}TY;[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DYV{I|L}TY;[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DY{I|L}VTY;[Y{I|L}]{M(Oxidation (M))|F}YYV{I|L}TY;[Y{I|L}]{M(Oxidation (M))|F}YVY{I|L}TY;[Y{I|L}]{M(Oxidation (M))|F}YY{I|L}VTY;[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DY{I|L}TVY;[YT]EE{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}TY;[Y{I|L}]{M(Oxidation (M))|F}YY{I|L}TVY;[YT]EE{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VTY 5.8717;5.8717;5.488;5.2427;5.2427;4.8591;4.7023;4.3366;4.0734;3.953 -;-;-;-;-;-;-;-;-;- 485 1 1.986 49118.2 1.0 3869 3465 7334 DOHH2_400M_050219_2,7336 DOHH2_400M_050219_2,7336,VSERDVYLTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7337 39.912 88.0 633150.0 25 0 132320.0 + 33438 SIAPRMMSV 9 74 496.2560754607034 990.497597988207 2 496.2568237185478 MULTI CID FTMS 0 0 0 7334 525038.8125 0.8903822297932091 1 -0.1028938293457031 3 Unmodified _SIAPRMMSV_ ENSG00000047315|ENST00000314595|POLR2B 24.99096001346401 0.2132109383330889 2 {[TV]|[{I|L}S]}A[WE]S{I|L}SV 9 4 + 51.277 0.0 0.0 5.1769 5.1769 78.04 0.0 0.0 0.0 4.119543704721593 4.119543704721593 4.119543704721593 4.119543704721593 0 1.5924778212679485 2.0 0.0 0.0 {[TV]|[{I|L}S]}A[WE]S{I|L}SV;{[TV]|[{I|L}S]}A[HS][YK]SV;{[TV]|[{I|L}S]}AV[RD][EC]V;{[TV]|[{I|L}S]}AV[RD][DC]{I|L};{[TV]|[{I|L}S]}VA[RD][EC]V;{[TV]|[{I|L}S]}V[WR][EC]V;{[TV]|[{I|L}S]}[NS]{[QG]|[NA]}S{I|L}SV;{[TV]|[{I|L}S]}VA[RD][DC]{I|L};{[TV]|[{I|L}S]}V[WR][DC]{I|L};[WY][RD]V[RP] 5.1769;4.761;4.6805;4.237;4.1228;3.7727;3.7424;3.6793;3.3292;1.5392 -;-;-;-;-;-;-;-;-;- 120 1 1.986 47683.4 1.0 3870 3465 7334 DOHH2_400M_050219_2,7337 DOHH2_400M_050219_2,7337,SIAPRMMSV False True SIAPRMMSV 39.912169 496.256823718548 3568514.0 7334.0 ENSG00000047315|ENST00000314595|POLR2B 5.215264956156413 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7338 39.919 367.0 346350.0 25 0 30225.0 + 5403 DLKVKLTEV 9 131 522.8181458705023 1043.6217388078046 2 522.8187744021416 MULTI CID FTMS 0 0 0 7334 263543.5625 0.2679437685602678 2 -0.2186355590820312 4 Unmodified _DLKVKLTEV_ ENSG00000132467|ENST00000254803|UTP3 92.20098385977256 0.0140933140335417 2 D{I|L}KV{M(Oxidation (M))|F}TV{I|L} 8 4 88.168 0.0 0.0 8.4483 0.0 0.0 0.0 125.07241235904532 125.07241235904532 41.184107709105376 0.0 0.0 0.0 0 1.25 2.0 1.055462187404089 0.4247425010840047 D{I|L}KV{M(Oxidation (M))|F}TV{I|L} 8.4483 - 1961 + 1 1.986 103384.3 1.0 3871 3465 7334 DOHH2_400M_050219_2,7338 DOHH2_400M_050219_2,7338,DLKVKLTEV True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7339 39.933 800.0 287200.0 25 0 16156.0 + 6899 EEFDRLVKEY 10 150 664.3299896143155 1326.645426295431 2 664.3296996951103 MULTI CID FTMS 0 0 0 7334 237693.546875 1.0 0 0.0 5 Unmodified _EEFDRLVKEY_ ENSG00000092036|ENST00000541587|HAUS4;nc|ENSG00000092036|Q9H6D7-2|HAUS4;nc|ENSG00000092036|Q9H6D7-3|HAUS4;nc|ENSG00000092036|Q9H6D7-4|HAUS4 115.05908914016896 0.0010566098934358 2 EE{M(Oxidation (M))|F}DR{I|L}VKEY 10 0 + 95.623 0.0 0.0 7.2078 7.2078 88.16 0.0 0.0 0.0 7.206347643199962 7.206347643199962 7.206347643199962 7.206347643199962 0 2.742992819099939 2.0 0.5 0.3807196863200844 + + EE{M(Oxidation (M))|F}DR{I|L}VKEY;EE[HS]{[HG]|PP}{I|L}VKEY;EEVVV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VKEY;EEVV[W{M(Oxidation (M))|F}]VKEY;EE{M(Oxidation (M))|F}{I|L}{I|L}{[SA]|[TG]}VKEY;EEVVV[W{M(Oxidation (M))|F}]KEY;EE{M(Oxidation (M))|F}{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KEY;[YE]{[ET]|[MV]}[PG]{I|L}VKEY;{[ET]|[MV]}[HD]{[HG]|PP}{I|L}VKEY;[{M(Oxidation (M))|F}V][{I|L}A][MD]{I|L}VKEY 7.2078;6.6646;6.5204;6.3844;6.2204;6.1747;5.8747;5.3051;5.2105;5.2022 +;-;-;-;-;-;-;-;-;- + 1920 + 1 1.986 168110.2 0.8899999856948853 3872 3465 7334 DOHH2_400M_050219_2,7339 DOHH2_400M_050219_2,7339,EEFDRLVKEY True True EEFDRLVKEY 39.932612 664.32969969511 1775346.5 7334.0 nc|ENSG00000092036|Q9H6D7-4|HAUS4;;ENSG00000092036|ENST00000541587|HAUS4;;nc|ENSG00000092036|Q9H6D7-2|HAUS4;;nc|ENSG00000092036|Q9H6D7-3|HAUS4 8.7910737991333 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7340 39.936 183.0 392570.0 25 0 40593.0 + 9511 FLDSTGSRLDY 11 91 637.3062600413134 1272.5979671494267 2 637.3064453005791 MULTI CID FTMS 0 0 0 7334 233072.421875 0.2677634916825961 2 -0.2186355590820312 6 Unmodified _FLDSTGSRLDY_ ENSG00000136261|ENST00000258761|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF;nc|ENSG00000136261|Q9Y6E2-2|BZW2 24.881564428377168 0.5079759154518888 2 YY{I|L}[RN]TSD{I|L}E 10 8 + 53.02 0.0 0.0 4.1663 4.1663 71.842 0.0 0.0 0.0 2.455126678141504 5.30726239543597 2.455126678141504 2.455126678141504 0 0.7614393726401688 0.0 0.0 0.0 YY{I|L}[RN]TSD{I|L}E;[DP]N{I|L}[RN]TSD{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}[NP][RN]TSD{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}[DP][RN]TSD{I|L}E;[DP]GG{I|L}[RN]TSD{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[YV][DP]Y{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[YV][DP]Y{I|L}E 4.1663;3.9734;3.6565;3.4328;3.2561;2.1354;1.4876 -;-;-;-;-;-;- 161 1 1.986 57591.0 1.0 3873 3465 7334 DOHH2_400M_050219_2,7340 DOHH2_400M_050219_2,7340,FLDSTGSRLDY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7341 39.95 800.0 237710.0 25 0 15616.0 + + -1 DSDESYMEKSLY 12 165 733.8033681361919 1465.5921833391835 2 733.8030883669853 MULTI CID FTMS 0 0 0 7334 182867.8125 1.0 0 0.0 7 Carbamidomethyl (C) _DDEC(Carbamidomethyl (C))MKHLQQY_ ENSG00000092853|ENST00000318121|CLSPN;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN 13.042465956692816 0.7638483625850725 2 {[DS]|[MA]|[CV]|TT}DESYME[KS]{I|L}Y 12 -1 + 79.971 0.0 0.0 5.4566 5.4566 79.178 0.0 0.0 0.0 5.454608969861937 14.226208160867884 5.454608969861937 4.203103093438969 0 2.66944517631652 0.0 3.3767959391884546 0.0 {[DS]|[MA]|[CV]|TT}DESYME[KS]{I|L}Y;{[DS]|[MA]|[CV]|TT}EDSYME[KS]{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SDSYME[KS]{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DSSYME[KS]{I|L}Y;{[ES]|[DT]|[{I|L}C]}DDSYME[KS]{I|L}Y;{[DS]|[MA]|[CV]|TT}DESYEM[KS]{I|L}Y;{[DS]|[MA]|[CV]|TT}DTDYME[KS]{I|L}Y;{[DS]|[MA]|[CV]|TT}EDSYEM[KS]{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SDSYEM[KS]{I|L}Y;{[DS]|[MA]|[CV]|TT}ESDYME[KS]{I|L}Y 5.4566;5.1698;5.0844;4.8341;4.8164;4.7164;4.4578;4.4296;4.3442;4.171 -;-;-;-;-;-;-;-;-;- 5076 1 1.986 135775.9 0.7699999809265137 3874 3465 7334 DOHH2_400M_050219_2,7341 DOHH2_400M_050219_2,7341,DDECMKHLQQY False False DSDESYMEKSLY 39.950014 733.803088366985 1304273.0 7334.0 ENSG00000092853|ENST00000318121|CLSPN;;nc|ENSG00000092853|Q9HAW4-2|CLSPN;;nc|ENSG00000092853|Q9HAW4-3|CLSPN 8.465478738149008 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7342 39.954 204.0 322140.0 25 0 57123.0 + + -1 FSDYLHPQY 9 98 585.2624924762123 1168.5104320192245 2 585.2665893435478 MULTI CID FTMS 0 0 0 7334 191588.453125 1.0 0 0.0 8 Carbamidomethyl (C) _AYDSLEQAIC(Carbamidomethyl (C))_ nc|ENSG00000260916|Q9ULG6|CCPG1;nc|ENSG00000260916|Q9ULG6-2|CCPG1;nc|ENSG00000260916|Q9ULG6-4|CCPG1;ENSG00000260916|ENST00000442196|CCPG1;ENST00000568372.5_1_15:55651699-55664264:-|nuORF 18.1463463914782 0.5430639438673815 2 {[YD]|[{M(Oxidation (M))|F}M]}KH{I|L}DYSE 9 -1 + 55.014 0.0 0.0 4.7081 4.7081 70.926 0.0 0.0 0.0 0.2726570743408985 2.838096733120281 0.2726570743408985 0.2726570743408985 0 0.0 1.0 0.3807196863200844 0.3494850021680094 {[YD]|[{M(Oxidation (M))|F}M]}KH{I|L}DYSE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TA]H{I|L}DYSE;{M(Oxidation (M))|F}SYD{I|L}HPQY;{[YD]|[{M(Oxidation (M))|F}M]}KH{I|L}YDSE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TA]H{I|L}YDSE;{M(Oxidation (M))|F}SDY{I|L}HPQY;{M(Oxidation (M))|F}SYDK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SY;{M(Oxidation (M))|F}SYRS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SY;{M(Oxidation (M))|F}SYD{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SY;{[YD]|[{M(Oxidation (M))|F}M]}[H{I|L}]KDYSE 4.7081;4.6847;4.4652;4.3446;4.3213;4.1017;3.8813;3.8813;3.4839;3.4594 -;-;-;-;-;-;-;-;-;- 1259 1 1.986 54885.3 1.0 3875 3465 7334 DOHH2_400M_050219_2,7342 DOHH2_400M_050219_2,7342,AYDSLEQAIC False False FSDYLHPQY 39.953916 585.266589343548 1223575.125 7334.0 nc|ENSG00000260916|Q9ULG6|CCPG1;;nc|ENSG00000260916|Q9ULG6-2|CCPG1;;nc|ENSG00000260916|Q9ULG6-4|CCPG1;;ENSG00000260916|ENST00000442196|CCPG1;;ENST00000568372.5_1_15:55651699-55664264:-|nuORF 8.717754681905111 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7343 39.968 800.0 249770.0 25 0 9728.4 -1 0 172 946.433918239842 1890.853283546484 2 946.9363281130792 MULTI CID FTMS 0 0 0 7334 153064.640625 0.3485284166229648 -1 0.0847434997558593 9 2 [MN]PN{I|L}NEEQRGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]} 16 -1 + 112.04 0.0 0.0 5.9254 5.9254 85.511 0.0 0.0 0.0 40.1845096328223 9.014545898519003 9.014545898519003 9.01390202114048 0 2.418580043289144 1.5228787452803376 1.086696871556164 1.7302046884880935 [MN]PN{I|L}NEEQRGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}GGEEQRGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PGG{I|L}NEEQRGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEEQ[VG]GD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEE[AG]RGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEEQRGD{M(Oxidation (M))|F}K{[CP]|[EA]};{I|L}[DN]N{I|L}NEEQRGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};{I|L}E[DV]{I|L}NEEQRGD{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEEQ[VG]GD{M(Oxidation (M))|F}K{[CP]|[EA]};[MN]PN{I|L}NEE[AG]RGD{M(Oxidation (M))|F}K{[CP]|[EA]} 5.9254;5.4487;5.4487;5.4487;5.4487;5.0208;4.7427;4.5542;4.5441;4.5441 -;-;-;-;-;-;-;-;-;- 21070 + 1 1.986 129715.6 0.6800000071525574 3876 3465 7334 DOHH2_400M_050219_2,7343 DOHH2_400M_050219_2,7343, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7344 39.975 399.0 256390.0 25 0 27591.0 + 11430 GGVLRHGQ 8 152 412.2307579612923 822.4469629893846 2 412.2305480837822 MULTI CID FTMS 0 0 0 7334 139513.15625 0.9057262203606272 1 -0.1028938293457031 10 Unmodified _GGVLRHGQ_ REV__ENSG00000168056|ENST00000301873|LTBP3;REV__ENST00000525443.1_1_11:65310528-65310994:-|nuORF;REV__nc|ENSG00000168056|Q9NS15-2|LTBP3 2.577480529830294 0.808687252328423 2 {I|L} 1 -1 7.6144 0.0 0.0 0.92582 0.0 0.0 691.3520055692659 0.0 691.3520055692659 0.0 -1.4266750356873086 -1.4266750356873086 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.92582 + + 51 + 1 1.986 85647.0 1.0 3877 3465 7334 DOHH2_400M_050219_2,7344 DOHH2_400M_050219_2,7344,GGVLRHGQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7345 39.99 800.0 233210.0 25 0 18433.0 + 22933 LSELFSAWL 9 198 533.2844581136259 1064.5543632940517 2 533.2847167849541 MULTI CID FTMS 0 0 0 7334 125260.734375 0.4617571579761886 2 -0.2186355590820312 11 Unmodified _LSELFSAWL_ REV__ENSG00000122882|ENST00000372979|ECD;REV__nc|ENSG00000122882|O95905-2|ECD;REV__nc|ENSG00000122882|O95905-3|ECD 32.30548876998284 0.1201446275138228 2 [DP][VP]DV{I|L}DPV 10 -1 + 52.162 0.0 0.0 4.8999 4.8999 78.127 0.0 0.0 0.0 30.487609642191856 11.462946571258795 11.462946571258795 5.31234684152075 0 0.6861818737241735 1.5228787452803376 0.9436726795685344 0.0 [DP][VP]DV{I|L}DPV;[DP][VP]D{I|L}VDPV;[DP]Y{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV;[DP]Y{I|L}K[{I|L}P]GY;[{I|L}T]D{I|L}VD[VP]{[HG]|PP};[{I|L}T]D{I|L}VDD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[DP]Y{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L};[DP][VP]DV{I|L}V[DP];[DP]Y{I|L}K[Y{I|L}][PG];[DP]Y{I|L}K{[ES]|[DT]|[{I|L}C]}T{I|L} 4.8999;4.4009;4.0668;3.7256;3.6388;3.6016;3.5227;3.398;3.3518;3.2787 -;-;-;-;-;-;-;-;-;- 2191 + 1 1.986 146586.1 0.5799999833106995 3878 3465 7334 DOHH2_400M_050219_2,7345 DOHH2_400M_050219_2,7345,LSELFSAWL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7346 39.999 495.0 219920.0 25 0 33542.0 + 15179 VNGVRVLSV 9 128 471.2923139077164 940.5700748822328 2 471.7904540896416 MULTI CID FTMS 0 0 0 7334 100109.8671875 0.498308233587272 10 -0.9080238342285156 12 Unmodified _IPDKLRSL_ ENST00000461864.5_1_3:136561051-136561096:-|nuORF 26.34127834903884 0.4900704351052977 2 V 1 8 12.474 0.0 0.0 1.3262 0.0 0.0 823.4907043151414 0.0 823.4907043151414 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3262 - 215 + 1 1.986 89348.2 1.0 3879 3465 7334 DOHH2_400M_050219_2,7346 DOHH2_400M_050219_2,7346,IPDKLRSL False False VNGVRVLSV 39.998637 471.790454089642 823180.1875 7334.0 ENST00000461864.5_1_3:136561051-136561096:-|nuORF 2.529667695363363 2.0 False 9.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 7347 40.004 272.0 178550.0 25 0 19165.0 + 4784 DEMVSLKDY 9 90 550.2516422436465 0 550.2527343630791 PEAK CID FTMS 0 0 0 7334 88453.0 1.0 0 0.0 13 Unmodified _DEMVSLKDY_ ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000530115.1_1_11:27910903-27911533:-|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 20.41453444215458 0.197313647343139 2 VS{I|L} 3 6 13.456 0.0 0.0 1.2249 0.0 0.0 375.1075652712965 421.1725718381567 796.2801371094531 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + VS{I|L} 1.2249 + + 29 + 1 1.986 42915.4 1.0 3880 3465 7334 DOHH2_400M_050219_2,7347 DOHH2_400M_050219_2,7347,DEMVSLKDY False True DEMVSLKDY 40.003674 550.252734363079 804148.125 7334.0 ENST00000530115.1_1_11:27910903-27911533:-|nuORF;;nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1 6.580938816070557 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7348 40.007 146.0 370380.0 25 0 33988.0 + 29131 QETPLPRSW 9 87 557.2885418804967 1112.5625308277934 2 557.2882568240166 MULTI CID FTMS 0 0 0 7334 135376.828125 0.6126832632948139 -1 0.0847434997558593 14 Unmodified _QETPLPRSW_ ENSG00000010017|ENST00000011619|RANBP9;ENSG00000141084|ENST00000317506|RANBP10;ENST00000602525.5_1_16:67765330-67840439:-|nuORF;nc|ENSG00000141084|Q6VN20-3|RANBP10 55.50274090549119 0.0285720310785888 2 QETP{I|L} 5 4 58.672 0.0 0.0 5.2736 0.0 0.0 0.0 541.2532710852407 541.2532710852407 45.17728766960431 0.0 0.0 0.0 0 0.8494850021680094 1.2218487496163564 0.0 0.0 + QETP{I|L} 5.2736 + + 136 + 1 1.986 49380.1 1.0 3881 3465 7334 DOHH2_400M_050219_2,7348 DOHH2_400M_050219_2,7348,QETPLPRSW True True QETPLPRSW 40.006608 557.288256824017 2272039.0 7334.0 ENSG00000010017|ENST00000011619|RANBP9;;ENST00000602525.5_1_16:67765330-67840439:-|nuORF;;ENSG00000141084|ENST00000317506|RANBP10;;nc|ENSG00000141084|Q6VN20-3|RANBP10 4.710061073303223 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7350 40.011 39.0 1024400.0 25 0 144800.0 + 11318 GEWASGGVRSF 11 60 576.775884597574 1151.5372162619478 2 576.7758056521416 MULTI CID FTMS 0 0 0 7349 914627.125 0.45724994760104 2 -0.2289085388183593 1 Unmodified _GEWASGGVRSF_ ENSG00000126432|ENST00000265462|PRDX5;nc|ENSG00000126432|P30044-3|PRDX5;nc|ENSG00000126432|P30044-4|PRDX5 23.80106514851385 0.5333463718001408 2 WADASG 6 8 59.882 0.0 0.0 5.2002 0.0 0.0 0.0 561.2788179986936 561.2788179986936 47.1180777427622 0.0 0.0 0.0 0 1.6237125054200234 1.5228787452803376 0.0 0.0 WADASG 5.2002 - 103 + 1 1.986 36355.7 1.0 3882 3466 7349 DOHH2_400M_050219_2,7350 DOHH2_400M_050219_2,7350,GEWASGGVRSF False True GEWASGGVRSF 40.011397 576.775805652142 28357138.0 7349.0 ENSG00000126432|ENST00000265462|PRDX5;;nc|ENSG00000126432|P30044-3|PRDX5;;nc|ENSG00000126432|P30044-4|PRDX5 0.7500212987263998 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7351 40.013 41.0 1129600.0 25 0 128760.0 + 38582 TTDFPGNYSGY 11 68 611.2563810020872 1220.4982090709743 2 611.2570068240166 MULTI CID FTMS 0 0 0 7349 923413.6875 0.7760159558247237 5 -0.468719482421875 2 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 36.506200033944 0.2662161991516171 2 [YG][NP]S[DV]YSGY 11 7 [YG][NP]S[DV]Y + + 20.802 14.613 1.6321 1.7044 1.7044 47.207 0.0 0.0 0.0 0.0 2.1127451000356388 0.0 0.0 0 0.0 0.0 0.0 0.0 [YG][NP]S[DV]YSGY 1.7044 - 268 + 1 1.986 39100.3 1.0 3883 3466 7349 DOHH2_400M_050219_2,7351 DOHH2_400M_050219_2,7351,TTDFPGNYSGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7352 40.014 53.0 1047500.0 25 0 93158.0 + 2682 ATDRWYDEY 9 67 609.7567298532333 1217.4989067732663 2 609.7570678591728 MULTI CID FTMS 0 0 0 7349 1019642.5 1.0 0 0.0 3 Unmodified _ATDRWYDEY_ ENSG00000139197|ENST00000675855|PEX5;ENST00000539304.1_1_12:7344181-7354515:+|nuORF;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5 28.49450938151212 0.1686335738423394 2 [TA][RD]WYDEY 9 0 + 56.449 0.0 0.0 4.6364 4.6364 84.825 0.0 0.0 0.0 13.489853770435332 35.99107903826933 13.489853770435332 15.585003915861648 0 0.8807196863200843 1.2218487496163564 0.1989700043360188 0.0 + + [TA][RD]WYDEY;{[ES]|[DT]|[{I|L}C]}{[QV]|[N{I|L}]|[RA]|[KV]}WYDEY;{[ES]|[DT]|[{I|L}C]}{[QV]|[N{I|L}]|[RA]|[KV]}{[DA]|[EG]}YDEY;{[YD]|[{M(Oxidation (M))|F}M]}[WR]DTAEY;[PG]{NN|[MP]|[D{I|L}]|[EV]}[HT]DTAEY;[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E][RN]DEY;[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E]{[NV]|[RG]}TAEY;{[YD]|[{M(Oxidation (M))|F}M]}[WR][TA]DEY;[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E][WQ]AEY;{[YD]|[{M(Oxidation (M))|F}M]}[WR]D[WD]Y 4.6364;3.3564;2.6;2.47;2.436;2.1661;2.0635;1.8163;1.7743;1.0369 +;-;-;-;-;-;-;-;-;- + 223 1 1.986 45535.6 1.0 3884 3466 7349 DOHH2_400M_050219_2,7352 DOHH2_400M_050219_2,7352,ATDRWYDEY False True ATDRWYDEY 40.013953 609.757067859173 7695874.5 7349.0 ENSG00000139197|ENST00000675855|PEX5;;nc|ENSG00000139197|P50542-3|PEX5;;ENST00000539304.1_1_12:7344181-7354515:+|nuORF;;nc|ENSG00000139197|P50542-2|PEX5;;nc|ENSG00000139197|P50542-4|PEX5 8.66808271408081 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7353 40.018 200.0 350750.0 25 0 44699.0 + 24452 MHIPTGVI 8 101 434.2428106256922 866.4710683181844 2 434.2427245974541 MULTI CID FTMS 0 0 0 7349 290618.78125 0.6918063823108018 3 -0.3128738403320312 4 Unmodified _MHIPTGVI_ REV__ENSG00000133059|ENST00000367162|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-3|DSTYK 2.889219685676258 0.8067950007271085 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.986 59947.4 1.0 3885 3466 7349 DOHH2_400M_050219_2,7353 DOHH2_400M_050219_2,7353,MHIPTGVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7354 40.021 193.0 341890.0 25 0 28444.0 + 23369 LTDLVDDNY 9 113 534.248503516944 1066.4824541006878 2 534.2484008669853 MULTI CID FTMS 0 0 0 7349 279252.0 0.8723881748122172 -1 0.1028938293457031 5 Unmodified _LTDLVDDNY_ ENSG00000174231|ENST00000304992|PRPF8 34.10243960390752 0.1078313939113124 2 [{I|L}T]D{I|L}V 5 4 32.179 0.0 0.0 3.0173 0.0 0.0 0.0 522.1470408528941 522.1470408528941 14.943868066579707 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 + [{I|L}T]D{I|L}V 3.0173 + + 202 1 1.986 57240.9 1.0 3886 3466 7349 DOHH2_400M_050219_2,7354 DOHH2_400M_050219_2,7354,LTDLVDDNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7355 40.025 176.0 486290.0 25 0 68416.0 + 25056 MPVEKNITL 9 110 522.7913871294418 1043.5682213256837 2 522.7918578982353 MULTI CID FTMS 0 0 0 7349 200075.59375 0.5793960449441456 -2 0.1876373291015625 6 Unmodified _MPVEKNITL_ ENSG00000170571|ENST00000303221|EMB;ENST00000505896.5_1_5:49695109-49707239:-|nuORF;nc|ENSG00000170571|Q6PCB8-2|EMB 41.8396318013385 0.0653578398400075 2 MPQV 4 7 30.094 0.0 0.0 2.8837 0.0 0.0 0.0 585.3306368463499 585.3306368463499 3.8907562519182193 0.0 0.0 0.0 0 0.1677353201839438 1.2218487496163564 0.0 0.0 MPQV 2.8837 - 252 + 1 1.986 69448.7 1.0 3887 3466 7349 DOHH2_400M_050219_2,7355 DOHH2_400M_050219_2,7355,MPVEKNITL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7356 40.03 255.0 306210.0 25 0 38908.0 8604 EVCKLPRL 8 118 479.2794450135249 956.5443370938498 2 479.2776367068291 MULTI CID FTMS 0 0 0 7349 196771.484375 0.4868585733616767 8 -0.7175636291503906 7 Unmodified _EVCKLPRL_ ENSG00000072518|ENST00000402010|MARK2;ENSG00000075413|ENST00000429436|MARK3;ENSG00000116141|ENST00000366917|MARK1;ENST00000555235.1_1_14:103966361-103969561:+|nuORF;nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-11|MARK2;nc|ENSG00000072518|Q7KZI7-12|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;nc|ENSG00000072518|Q7KZI7-14|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-3|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-6|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-8|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2;nc|ENSG00000075413|P27448-2|MARK3;nc|ENSG00000075413|P27448-3|MARK3;nc|ENSG00000075413|P27448-4|MARK3;nc|ENSG00000075413|P27448-6|MARK3;nc|ENSG00000075413|P27448-7|MARK3;nc|ENSG00000075413|P27448-8|MARK3;nc|ENSG00000116141|Q9P0L2-2|MARK1;nc|ENSG00000116141|Q9P0L2-3|MARK1 5.230669730166228 0.792582437072536 2 {I|L} 1 7 11.42 0.0 0.0 1.1939 0.0 0.0 825.4494101913092 0.0 825.4494101913092 0.0 -1.996391797221495 -1.996391797221495 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1939 + + 30 + 1 1.986 63343.7 1.0 3888 3466 7349 DOHH2_400M_050219_2,7356 DOHH2_400M_050219_2,7356,EVCKLPRL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7357 40.035 314.0 330290.0 25 0 23864.0 + 638 AELELQKQL 9 133 536.3059713425152 1070.5973897518304 2 536.3063232302666 MULTI CID FTMS 0 0 0 7349 155358.015625 1.0 0 0.0 8 Unmodified _AELELQKQL_ ENSG00000175467|ENST00000312397|SART1 74.92900055777586 0.0191935851694334 2 {[CP]|[EA]}{I|L}E{I|L}Q[KS]S 9 2 54.816 0.0 0.0 5.1201 0.0 0.0 0.0 82.06689630679921 82.06689630679921 22.046284272644023 0.0 0.0 0.0 0 0.8494850021680094 0.0 1.274227503252014 1.424742501084005 {[CP]|[EA]}{I|L}E{I|L}Q[KS]S 5.1201 - 785 + 1 1.986 85831.4 1.0 3889 3466 7349 DOHH2_400M_050219_2,7357 DOHH2_400M_050219_2,7357,AELELQKQL True True AELELQKQL 40.035374 536.3072 1530459.125 7349.0 ENSG00000175467|ENST00000312397|SART1 5.072756131490071 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7358 40.049 800.0 139460.0 25 0 17633.0 -1 0 96 905.4482018234356 1808.8818507136712 2 905.4492065310478 MULTI CID FTMS 0 0 0 7349 103333.8671875 0.1563456420217089 6 -0.5231857299804688 9 2 H{I|L}[NP]{I|L}NEER 9 -1 63.695 0.0 0.0 3.5212 0.0 0.0 0.0 703.3167818658811 703.3167818658811 44.71516880861636 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.4247425010840047 H{I|L}[NP]{I|L}NEER 3.5212 - 337 + 1 1.986 76684.6 0.6000000238418579 3890 3466 7349 DOHH2_400M_050219_2,7358 DOHH2_400M_050219_2,7358, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7359 40.063 800.0 120610.0 25 0 8860.7 + 35083 SQVEGEHQLW 10 143 606.785605230582 1211.5566575279638 2 606.7861205935478 MULTI CID FTMS 0 0 0 7349 92135.796875 1.0 0 0.0 10 Unmodified _SQVEGEHQLW_ ENSG00000117724|ENST00000366955|CENPF 57.24910588100465 0.0438022649904578 2 {[QS]|[NT]}VEW{[HG]|PP}A{I|L}W 10 3 + 58.822 0.0 0.0 4.8551 4.8551 74.792 0.0 0.0 0.0 10.542094457479784 10.542094457479784 10.542094457479784 2.724928274552596 0 1.8494850021680087 1.0 0.3494850021680094 0.0 {[QS]|[NT]}VEW{[HG]|PP}A{I|L}W;{[QS]|[NT]}VEW[HQ]{I|L}W;{[QS]|[NT]}V{[CT]|[{M(Oxidation (M))|F}G]}S{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}W;{[QS]|[NT]}V[YQ]{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}W;{[QS]|[NT]}VE{[DA]|[EG]}{[HG]|PP}A{I|L}W;{[QS]|[NT]}V[YK]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}W;{[QS]|[NT]}VE{[DA]|[EG]}[HQ]{I|L}W;{[QS]|[NT]}VE[YG][KC]{I|L}W;{[QS]|[NT]}VEW{[HG]|PP}AW{I|L};{[QS]|[NT]}{[CT]|[{M(Oxidation (M))|F}G]}VS{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}W 4.8551;4.6302;4.3297;4.1338;4.0987;3.985;3.8702;3.8702;3.8245;3.6285 -;-;-;-;-;-;+;-;-;- + 2244 + 1 1.986 73274.5 0.5699999928474426 3891 3466 7349 DOHH2_400M_050219_2,7359 DOHH2_400M_050219_2,7359,SQVEGEHQLW True True SQVEGEHQLW 40.063053 606.786120593548 639877.5625 7349.0 ENSG00000117724|ENST00000366955|CENPF 7.063165346781413 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7360 40.077 800.0 123790.0 25 0 10596.0 -1 DTCTHTHMHT 10 142 600.2329649908758 1198.4513770485514 2 600.2333251833916 MULTI CID FTMS 0 0 0 7349 84340.8125 1.0 0 0.0 11 Oxidation (M) _DTCTHTHM(Oxidation (M))HT_ ENST00000264025.7_1_11:119534550-119534718:-|nuORF 6.723162845929126 0.6955379296933136 2 [H{I|L}]{[WT]|[RM]}VYE 7 -1 26.278 0.0 0.0 2.1926 0.0 0.0 0.0 266.97308049997645 266.97308049997645 1.918176697686501 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.5994850021680094 0.3494850021680094 [H{I|L}]{[WT]|[RM]}VYE 2.1926 - 1277 1 1.986 76068.8 0.5600000023841858 3892 3466 7349 DOHH2_400M_050219_2,7360 DOHH2_400M_050219_2,7360,DTCTHTHMHT False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7361 40.08 129.0 509320.0 25 0 26755.0 + -1 STELECGSMPF 11 108 637.257090414473 1272.499627895746 2 637.2558471560478 MULTI CID FTMS 0 0 0 7349 179144.96875 1.0 0 0.0 12 Carbamidomethyl (C),Oxidation (M) _STELEC(Carbamidomethyl (C))GSM(Oxidation (M))PF_ REV__nc|ENSG00000181798|Q8N535|LINC00471 17.11289562659939 0.6791789249425932 2 YY{I|L}[RN]TSD{I|L} 9 -1 30.812 0.0 0.0 2.4214 0.0 0.0 0.0 143.951018847171 143.951018847171 12.383512853885108 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 YY{I|L}[RN]TSD{I|L} 2.4214 - 293 1 1.986 55976.7 1.0 3893 3466 7349 DOHH2_400M_050219_2,7361 DOHH2_400M_050219_2,7361,STELECGSMPF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7362 40.084 139.0 429970.0 25 0 43162.0 + 8365 ESDGKSRWFY 10 83 425.53162634467697 1273.573049634231 3 425.5312682986259 MULTI CID FTMS 0 0 0 7349 139849.09375 0.593413389586331 -1 0.1028938293457031 13 Unmodified _ESDGKSRWFY_ ENSG00000146476|ENST00000367294|ARMT1 6.623454094837244 0.6959991410060766 2 [KG]QMA{[QN]|[E{I|L}]|[KN]}{[MG]|[TS]}{M(Oxidation (M))|F}Y 11 8 [KG]QMA{[QN]|[E{I|L}]|[KN]}{[MG]|[TS]}{M(Oxidation (M))|F} + + 14.604 -17.82 -1.6311 1.1467 1.1467 46.951 0.0 0.0 0.0 0.0 1.4165061435177506 0.0 0.0 0 0.0 0.0 0.0 0.0 [KG]QMA{[QN]|[E{I|L}]|[KN]}{[MG]|[TS]}{M(Oxidation (M))|F}Y 1.1467 - 81 + 1 1.986 55433.4 1.0 3894 3466 7349 DOHH2_400M_050219_2,7362 DOHH2_400M_050219_2,7362,ESDGKSRWFY False True ESDGKSRWFY 40.083788 425.531268298626 2101414.75 7349.0 ENSG00000146476|ENST00000367294|ARMT1 1.8881371021270752 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7363 40.098 800.0 138900.0 25 0 14106.0 + 5146 DIIKKPIAL 9 131 505.83372262359137 1009.6528923139828 2 505.8335754275322 MULTI CID FTMS 0 0 0 7349 128211.4453125 0.701354059700375 2 -0.2289085388183593 14 Unmodified _DIIKKPIAL_ ENSG00000198604|ENST00000360310|BAZ1A;nc|ENSG00000198604|Q9NRL2-2|BAZ1A 41.8396318013385 0.0653578398400075 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}KK[{I|L}P]A{I|L} 9 0 + 60.869 0.0 0.0 6.0287 6.0287 92.729 0.0 0.0 0.0 43.61818737241734 2.6760624017703094 2.6760624017703094 44.65067646030784 0 1.579689690656103 2.0 0.0 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}{I|L}KK[{I|L}P]A{I|L};{[TV]|[{I|L}S]}[{I|L}V]KG[{I|L}P]A{I|L};KK{I|L}P{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{I|L};[K{I|L}]KP{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{I|L};[{I|L}P]KK{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{I|L} 6.0287;1.6063;0.47312;0.37713;0.2324 +;-;-;-;- + 474 + 1 1.986 88547.6 0.5699999928474426 3895 3466 7349 DOHH2_400M_050219_2,7363 DOHH2_400M_050219_2,7363,DIIKKPIAL True True DIIKKPIAL 40.097605 505.833575427532 4467365.5 7349.0 ENSG00000198604|ENST00000360310|BAZ1A;;nc|ENSG00000198604|Q9NRL2-2|BAZ1A 3.1482725143432617 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7364 40.102 249.0 296330.0 25 0 28943.0 43909 YGAALVVA 8 128 382.2200932415714 762.4256335499429 2 382.2210265994072 MULTI CID FTMS 0 0 0 7349 103574.28125 0.0578070392383873 -3 0.3275108337402344 15 Unmodified _YGAALVVA_ ENSG00000174326|ENST00000574600|SLC16A11;nc|ENSG00000174326|Q8NCK7|SLC16A11 0.7936320650641473 0.8195151834710337 2 Q 1 8 8.2488 0.0 0.0 1.0819 0.0 0.0 616.3528929266992 0.0 616.3528929266992 0.0 0.0384341433314538 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 1.0819 - 12 + 1 1.986 60244.3 1.0 3896 3466 7349 DOHH2_400M_050219_2,7364 DOHH2_400M_050219_2,7364,YGAALVVA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7365 40.116 800.0 183660.0 25 0 42862.0 -1 TLARKMVL 8 161 474.2885937285496 0 474.2888671755791 PEAK CID FTMS 0 0 0 7349 93159.984375 0.80543602947032 25 -1.999671936035156 16 Oxidation (M) _TLARKM(Oxidation (M))VL_ ENSG00000182261|ENST00000691676|NLRP10 10.183394434864962 0.5394990767616434 2 T 1 -1 4.6041 0.0 0.0 0.4864 0.0 0.0 760.4255170696009 82.06689630679921 842.4924133764001 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.4864 + + 40 + 1 1.986 115091.5 0.4600000083446502 3897 3466 7349 DOHH2_400M_050219_2,7365 DOHH2_400M_050219_2,7365,TLARKMVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7366 40.122 347.0 258570.0 25 0 36257.0 37045 TGEASGIY 8 132 399.1863878921536 796.3582228511071 2 399.1862060427666 MULTI CID FTMS 0 0 0 7349 89453.1796875 1.0 0 0.0 17 Unmodified _TGEASGIY_ ENSG00000132849|ENST00000642238|PATJ;ENST00000459752.5_1_1:62228564-62579919:+|nuORF;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-4|PATJ;nc|ENSG00000132849|Q8NI35|PATJ 5.760428011301431 0.7893668129297577 2 Y 1 7 14.604 0.0 0.0 1.8339 0.0 0.0 615.2839868665353 0.0 615.2839868665353 0.0 -1.7256334060851657 -1.7256334060851657 0.0 0 0.0 0.0 0.0 0.0 + Y 1.8339 + + 24 + 1 1.986 74046.1 1.0 3898 3466 7349 DOHH2_400M_050219_2,7366 DOHH2_400M_050219_2,7366,TGEASGIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7368 40.129 133.0 448400.0 25 0 43101.0 + 35209 SSDNIMVQY 9 95 528.7366296764621 1055.4587064197242 2 528.7372314333916 MULTI CID FTMS 0 0 0 7367 444615.6875 0.2863881614300094 2 -0.1971321105957031 1 Unmodified _SSDNIMVQY_ ENSG00000158623|ENST00000425248|COPG2;ENSG00000181789|ENST00000314797|COPG1;nc|ENSG00000158623|Q9UBF2-2|COPG2 43.85829265575387 0.0542763391141878 2 [DN]SS{I|L}M 6 7 41.283 0.0 0.0 3.9113 0.0 0.0 0.0 405.17703566188703 405.17703566188703 17.699018381151305 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.6382104921644451 1.174742501084005 [DN]SS{I|L}M 3.9113 - 189 1 1.996 55456.4 1.0 3899 3467 7367 DOHH2_400M_050219_2,7368 DOHH2_400M_050219_2,7368,SSDNIMVQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7369 40.131 93.0 607880.0 25 0 108840.0 + 40687 VLFPPPML 8 89 457.2642121021641 912.5138712711282 2 457.2642700076103 MULTI CID FTMS 0 0 0 7367 586229.25 0.8211479880111652 6 -0.4973945617675781 2 Unmodified _VLFPPPML_ REV__ENSG00000146247|ENST00000275034|PHIP;REV__ENSG00000165288|ENST00000373275|BRWD3;REV__ENSG00000185658|ENST00000342449|BRWD1;REV__nc|ENSG00000165288|Q6RI45-2|BRWD3;REV__nc|ENSG00000165288|Q6RI45-3|BRWD3;REV__nc|ENSG00000165288|Q6RI45-4|BRWD3;REV__nc|ENSG00000165288|Q6RI45-5|BRWD3;REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1;REV__nc|ENSG00000185658|Q9NSI6|BRWD1 2.889219685676258 0.8067950007271085 2 {I|L} 1 -1 9.3971 0.0 0.0 1.0298 0.0 0.0 781.4190511801111 0.0 781.4190511801111 0.0 9.397130343970748 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0298 + + 5 + 1 1.996 51362.4 1.0 3900 3467 7367 DOHH2_400M_050219_2,7369 DOHH2_400M_050219_2,7369,VLFPPPML False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7370 40.135 183.0 358790.0 25 0 40238.0 -1 0 68 603.9673254404012 1808.880146921404 3 604.3013793826103 MULTI CID FTMS 0 0 0 7367 324937.09375 0.1688158651393666 7 -0.6018218994140625 3 2 [H{I|L}][NP]{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}Q 15 -1 + 68.668 0.0 0.0 3.7961 3.7961 68.88 0.0 0.0 0.0 6.628195034995358 0.0 0.0 0.9691001300805624 0 1.1549471895720984 1.6989700043360187 0.0 0.3807196863200844 [H{I|L}][NP]{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP]N{I|L}E{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}K;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H{I|L}{M(Oxidation (M))|F}G{[YD]|[{M(Oxidation (M))|F}M]}EN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H{I|L}{M(Oxidation (M))|F}G{[YD]|[{M(Oxidation (M))|F}M]}E{I|L}N{[DS]|[MA]|[CV]|TT}{I|L}Q;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H{I|L}{M(Oxidation (M))|F}G{[YD]|[{M(Oxidation (M))|F}M]}E{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;[NP][H{I|L}]{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP][H{I|L}]N{I|L}E{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}K 3.7961;3.7426;3.4297;3.3761;3.0063;2.4267;2.3731 -;-;-;-;-;-;- 433 1 1.996 57460.4 1.0 3901 3467 7367 DOHH2_400M_050219_2,7370 DOHH2_400M_050219_2,7370, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7371 40.137 111.0 375040.0 25 0 29234.0 + 16635 KEIGDVENW 9 82 545.2642527960139 0 545.2641479372978 PEAK CID FTMS 0 0 0 7367 316163.90625 0.2328752773512606 3 -0.2886505126953125 4 Unmodified _KEIGDVENW_ ENSG00000135441|ENST00000548925|BLOC1S1;nc|ENSG00000135441|P78537-2|BLOC1S1 34.93206674587334 0.0866320009191956 2 NEV[DG]{I|L}E 7 5 23.663 0.0 0.0 2.1739 0.0 0.0 204.0873301996465 125.07232080631094 329.1596510059574 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.7059771852360797 0.0 NEV[DG]{I|L}E 2.1739 - 86 + 1 1.996 38286.9 1.0 3902 3467 7367 DOHH2_400M_050219_2,7371 DOHH2_400M_050219_2,7371,KEIGDVENW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7372 40.151 800.0 171790.0 25 0 10593.0 -1 0 122 964.4444617022658 2890.3115557069973 3 964.7791015505792 MULTI CID FTMS 0 0 0 7367 284659.78125 0.4696004862462224 4 -0.3529777526855469 5 2 [NP]TSADDP{I|L}{I|L}HH 12 -1 29.312 0.0 0.0 1.0141 0.0 0.0 0.0 1589.6986883727172 1589.6986883727172 11.291615863770872 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.3252574989159953 [NP]TSADDP{I|L}{I|L}HH 1.0141 - 3077 1 1.996 97141.0 0.9300000071525574 3903 3467 7367 DOHH2_400M_050219_2,7372 DOHH2_400M_050219_2,7372, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7373 40.155 199.0 391540.0 25 0 21556.0 + 5344 DLHEKDFSL 9 112 552.2723903562919 1102.5302277793835 2 552.2722656130791 MULTI CID FTMS 0 0 0 7367 257041.015625 0.6263584227119825 -1 0.1157417297363281 6 Unmodified _DLHEKDFSL_ ENSG00000102699|ENST00000381989|PARP4 51.41523569358685 0.0372669606867193 2 D{I|L}HWW{M(Oxidation (M))|F}S{I|L} 8 3 + 89.708 0.0 0.0 8.1366 8.1366 88.742 0.0 0.0 0.0 51.35816051984875 13.399480616943508 13.399480616943508 6.419204875827532 0 0.9417509724019616 2.0 1.6237125054200234 0.0 D{I|L}HWW{M(Oxidation (M))|F}S{I|L};D{I|L}HEG[YR]T{I|L};{NN|[MP]|[D{I|L}]|[EV]}HWW{M(Oxidation (M))|F}S{I|L};{[YC]|[HE]}VWW{M(Oxidation (M))|F}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}H[YQ]S{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}HW[PA]HD{I|L};{NN|[MP]|[D{I|L}]|[EV]}H[SG]{M(Oxidation (M))|F}S{I|L}D{I|L};[{M(Oxidation (M))|F}V]H[QP]E{M(Oxidation (M))|F}S{I|L};{[YC]|[HE]}V[YQ]S{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}H[YQ]{NN|[MP]|[D{I|L}]|[EV]}S{I|L} 8.1366;7.5544;5.8968;5.2794;4.6947;4.4217;4.3083;4.2558;4.0773;3.9253 -;-;-;-;-;-;-;-;-;- 1067 + 1 1.996 62058.8 1.0 3904 3467 7367 DOHH2_400M_050219_2,7373 DOHH2_400M_050219_2,7373,DLHEKDFSL True True DLHEKDFSL 40.154517 552.272265613079 2680196.5 7367.0 ENSG00000102699|ENST00000381989|PARP4 5.416580041249593 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7374 40.158 177.0 318740.0 25 0 50878.0 + 16067 ITNNWKPL 8 84 493.2783123285221 984.5420717238442 2 493.2783080935478 MULTI CID FTMS 0 0 0 7367 210919.21875 0.3546950614075036 2 -0.1971321105957031 7 Unmodified _ITNNWKPL_ REV__ENST00000471332.1_1_3:403392-405149:+|nuORF 13.50788311687929 0.7113601687236069 2 [{I|L}T]M{M(Oxidation (M))|F} 4 -1 43.06 0.0 0.0 4.3736 0.0 0.0 0.0 489.27390466861567 489.27390466861567 29.564856298445576 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 [{I|L}T]M{M(Oxidation (M))|F} 4.3736 - 38 + 1 1.996 48858.8 1.0 3905 3467 7367 DOHH2_400M_050219_2,7374 DOHH2_400M_050219_2,7374,ITNNWKPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7375 40.161 162.0 327100.0 25 0 28158.0 + 35538 STPDHSFSL 9 84 495.7299089271846 989.4452649211692 2 495.7299682497978 MULTI CID FTMS 0 0 0 7367 189203.328125 0.109467319163148 4 -0.3529777526855469 8 Unmodified _STPDHSFSL_ ENSG00000128272|ENST00000674920|ATF4 21.74664581756881 0.2544899275067181 2 S{M(Oxidation (M))|F}S{M(Oxidation (M))|F}SP 6 5 31.451 0.0 0.0 3.1787 0.0 0.0 319.173427618238 0.0 319.173427618238 0.0 7.805941947693213 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 S{M(Oxidation (M))|F}S{M(Oxidation (M))|F}SP 3.1787 - 185 + 1 1.996 45335.0 1.0 3906 3467 7367 DOHH2_400M_050219_2,7375 DOHH2_400M_050219_2,7375,STPDHSFSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7376 40.167 298.0 317390.0 25 0 38014.0 + 23414 LTELIDRY 8 101 511.7795316182073 1021.5445103032146 2 511.7798339724541 MULTI CID FTMS 0 0 0 7367 186791.515625 1.0 0 0.0 9 Unmodified _LTELIDRY_ ENSG00000102572|ENST00000539966|STK24;ENSG00000115694|ENST00000316586|STK25;ENST00000478403.5_1_2:242436769-242438604:-|nuORF;ENST00000487962.5_1_2:242435079-242438851:-|nuORF;ENST00000495143.5_1_2:242438052-242438731:-|nuORF;nc|ENSG00000102572|Q9Y6E0|STK24;nc|ENSG00000115694|O00506-2|STK25;nc|ENSG00000115694|O00506-3|STK25 62.57269311338072 0.1158273023829763 2 {I|L}TE{I|L}{I|L}DRY 8 0 + 87.966 0.0 0.0 8.6111 8.6111 97.846 0.0 0.0 0.0 72.55967932764958 8.688363253412106 8.688363253412106 31.47232629291655 0 0.7614393726401688 2.0 0.3807196863200844 0.3807196863200844 + + {I|L}TE{I|L}{I|L}DRY;[H{I|L}]SD{I|L}{I|L}E[VP];{[TV]|[{I|L}S]}HD{I|L}{I|L}E[VP];[VP]E[KG][PA]E[VP];[H{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PA]E[VP];[H{I|L}][HK]YE[VP];[H{I|L}][HK]EY[VP];{[MG]|[TS]}[YT]{I|L}{I|L}E[VP];{[ES]|[DT]|[{I|L}C]}[HV]{I|L}{I|L}E[VP];[DP]{I|L}[KG][PA]E[VP] 8.6111;5.5302;4.6736;3.4293;2.938;2.7158;2.4642;2.3443;2.3089;1.8487 +;-;-;-;-;-;-;-;-;- + 287 + 1 1.996 73780.6 1.0 3907 3467 7367 DOHH2_400M_050219_2,7376 DOHH2_400M_050219_2,7376,LTELIDRY True True LTELIDRY 40.166601 511.779833972454 1727771.375 7367.0 nc|ENSG00000115694|O00506-3|STK25;;nc|ENSG00000102572|Q9Y6E0|STK24;;ENST00000487962.5_1_2:242435079-242438851:-|nuORF;;nc|ENSG00000115694|O00506-2|STK25;;ENST00000495143.5_1_2:242438052-242438731:-|nuORF;;ENSG00000102572|ENST00000539966|STK24;;ENSG00000115694|ENST00000316586|STK25;;ENST00000478403.5_1_2:242436769-242438604:-|nuORF 6.133927822113037 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7377 40.18 800.0 200910.0 25 0 18921.0 + 19488 LFKDKVVL 8 152 481.30788739676575 960.6012218603316 2 481.3076049685478 MULTI CID FTMS 0 0 0 7367 131794.890625 1.0 0 0.0 10 Unmodified _LFKDKVVL_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 62.57269311338072 0.1158273023829763 2 {[QD]|[EN]|[WG]|[KD]|[RS]}KVV{M(Oxidation (M))|F}{I|L}{I|L} 8 4 + 41.403 0.0 0.0 4.3101 4.3101 68.998 0.0 0.0 0.0 0.6312244042186137 8.892494821072347 0.6312244042186137 0.1230450566754584 0 0.3252574989159953 0.0 0.8764613514953894 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}KVV{M(Oxidation (M))|F}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VKV{M(Oxidation (M))|F}{I|L}{I|L};{[TV]|[{I|L}S]}AAKV{M(Oxidation (M))|F}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}KV{M(Oxidation (M))|F}{I|L}V{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VK{M(Oxidation (M))|F}{I|L}V{I|L};{[TV]|[{I|L}S]}AAK{M(Oxidation (M))|F}{I|L}V{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}K{M(Oxidation (M))|F}{I|L}VV{I|L};VV[SG]KV{M(Oxidation (M))|F}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}KV{M(Oxidation (M))|F}V{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VK{M(Oxidation (M))|F}V{I|L}{I|L} 4.3101;4.2973;4.2444;4.1301;4.1173;4.0644;3.7969;3.6944;3.605;3.5922 -;-;-;-;-;-;-;-;-;- 843 1 1.996 124671.7 0.5699999928474426 3908 3467 7367 DOHH2_400M_050219_2,7377 DOHH2_400M_050219_2,7377,LFKDKVVL True True LFKDKVVL 40.18043 481.307604968548 1173085.5 7367.0 ENSG00000126457|ENST00000454376|PRMT1;;nc|ENSG00000126457|Q99873-5|PRMT1;;nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENST00000525616.1_1_19:50180537-50188241:+|nuORF 3.961664915084839 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7378 40.19 560.0 213580.0 25 0 12143.0 + 32155 RVQGFQVEY 9 130 563.2876143490813 1124.5606757649623 2 563.2870971560478 MULTI CID FTMS 0 0 0 7367 114576.25 0.8532112824465282 -1 0.1157417297363281 11 Unmodified _RVQGFQVEY_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 47.74868867922204 0.0453060283459952 2 {[QV]|[N{I|L}]|[RA]|[KV]}RG{M(Oxidation (M))|F}QVEY 9 2 + 61.906 0.0 0.0 5.5049 5.5049 78.449 0.0 0.0 0.0 3.4756841908579474 16.478174818886373 3.4756841908579474 3.4756841908579474 0 1.0941876774005248 0.6777807052660807 0.0 0.9210074136357708 {[QV]|[N{I|L}]|[RA]|[KV]}RG{M(Oxidation (M))|F}QVEY;[RV]QG{M(Oxidation (M))|F}QVEY;[AG]VRG{M(Oxidation (M))|F}QVEY;{[QV]|[N{I|L}]|[RA]|[KV]}RG{M(Oxidation (M))|F}[AG]VEY;[RV][AG]G{M(Oxidation (M))|F}QVEY;[RV]QG{M(Oxidation (M))|F}[AG]VEY;[AG]VRG{M(Oxidation (M))|F}[AG]VEY;[AG]S[KP]{M(Oxidation (M))|F}QVEY;[AG]{M(Oxidation (M))|F}RRQVEY;{[QS]|[NT]}[KP]{M(Oxidation (M))|F}QVEY 5.5049;5.1958;5.0953;4.6861;4.377;4.377;4.2804;3.9805;3.8419;3.6455 -;+;-;-;-;-;-;-;-;- + 748 1 1.996 97283.0 1.0 3909 3467 7367 DOHH2_400M_050219_2,7378 DOHH2_400M_050219_2,7378,RVQGFQVEY True True RVQGFQVEY 40.190257 563.287097156048 1106680.375 7367.0 nc|ENSG00000124214|O95793-2|STAU1;;nc|ENSG00000124214|O95793-3|STAU1;;ENSG00000124214|ENST00000371856|STAU1 6.915178298950195 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7379 40.201 534.0 339300.0 25 0 17833.0 + 4722 DEDPENKIEF 10 155 618.2753085114595 1234.5360640897188 2 618.2750732302666 MULTI CID FTMS 0 0 0 7367 101077.1953125 0.2562219451420958 -1 0.1157417297363281 12 Unmodified _DEDPENKIEF_ ENSG00000113141|ENST00000417647|IK;ENST00000434096.1_1_2:58688403-58689123:-|nuORF 118.20947048124656 0.0007427166967034 2 [EP]NK{I|L}EDDE{M(Oxidation (M))|F} 10 6 + 95.475 0.0 0.0 7.7337 7.7337 82.288 0.0 0.0 0.0 1.3856718058334394 16.53212513775344 1.3856718058334394 1.3856718058334394 0 0.75 0.6020599913279624 1.4604093769761877 1.3193415193665468 [EP]NK{I|L}EDDE{M(Oxidation (M))|F};[DP]QK{I|L}EDDE{M(Oxidation (M))|F};[EP]NK{I|L}DEDE{M(Oxidation (M))|F};[DP]QK{I|L}DEDE{M(Oxidation (M))|F};[AG]PDK{I|L}EDDE{M(Oxidation (M))|F};[EP]GGK{I|L}EDDE{M(Oxidation (M))|F};[QP]DK{I|L}EDDE{M(Oxidation (M))|F};[AG]DPK{I|L}EDDE{M(Oxidation (M))|F};[PG]ADK{I|L}EDDE{M(Oxidation (M))|F};[DP][AG]K{I|L}EDDE{M(Oxidation (M))|F} 7.7337;7.6214;7.2837;7.1715;7.1405;6.9913;6.9686;6.9482;6.9464;6.8791 -;-;-;-;-;-;-;-;-;- 3751 1 1.996 135411.9 1.0 3910 3467 7367 DOHH2_400M_050219_2,7379 DOHH2_400M_050219_2,7379,DEDPENKIEF True True DEDPENKIEF 40.200832 618.275073230267 5923080.0 7367.0 ENST00000434096.1_1_2:58688403-58689123:-|nuORF;;ENSG00000113141|ENST00000417647|IK 7.147406260172526 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7380 40.208 391.0 181310.0 25 0 19316.0 16044 ITKGTELQI 9 113 501.7947483099927 1001.5749436867852 2 501.2916747927666 MULTI CID FTMS 0 0 0 7367 83270.4921875 0.1904061183352911 -7 0.7222557067871094 13 Unmodified _ITKGTELQI_ ENSG00000174718|ENST00000312561|RESF1 10.073929032068715 0.563993802247229 2 [{I|L}T][DP]{M(Oxidation (M))|F} 5 7 21.707 0.0 0.0 2.1673 0.0 0.0 0.0 425.2528475397094 425.2528475397094 9.71726222832956 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}T][DP]{M(Oxidation (M))|F} 2.1673 - 72 + 1 1.996 56908.5 1.0 3911 3467 7367 DOHH2_400M_050219_2,7380 DOHH2_400M_050219_2,7380,ITKGTELQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7381 40.222 800.0 86552.0 25 0 6396.7 -1 0 87 958.441788504292 2872.303536113076 3 958.7764770388604 MULTI CID FTMS 0 0 0 7367 119698.4140625 1.0 0 0.0 14 2 PW 2 -1 9.464 0.0 0.0 0.32949 0.0 0.0 1631.7196260562384 954.394662725256 2586.1142887814945 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PW 0.32949 - 156 + 1 1.996 58232.6 0.6000000238418579 3912 3467 7367 DOHH2_400M_050219_2,7381 DOHH2_400M_050219_2,7381, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7382 40.236 800.0 103400.0 25 0 7304.2 + 5479 DLRTKATIEL 10 156 580.3377408567709 1158.6609287803417 2 580.3383056521416 MULTI CID FTMS 0 0 0 7367 113567.9140625 0.4069240127468412 2 -0.1971321105957031 15 Unmodified _DLRTKATIEL_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 28.49450938151212 0.328477364964909 2 {[TV]|[{I|L}S]}V[WK]AT{I|L}E{I|L} 10 3 + 35.029 0.0 0.0 3.0233 3.0233 74.792 0.0 0.0 0.0 9.030899869919434 19.54470415425095 9.030899869919434 8.209991640913003 0 0.4645069810232298 0.8239087409443188 1.2302046884880935 0.0 {[TV]|[{I|L}S]}V[WK]AT{I|L}E{I|L};{[TV]|[{I|L}S]}V[WK]ATE{I|L}{I|L};{[TV]|[{I|L}S]}[KQ]{NN|[MP]|[D{I|L}]|[EV]}T{I|L}E{I|L};[TA][RK]{NN|[MP]|[D{I|L}]|[EV]}T{I|L}E{I|L};{[TV]|[{I|L}S]}[KQ]{NN|[MP]|[D{I|L}]|[EV]}TE{I|L}{I|L};[TA][RK]{NN|[MP]|[D{I|L}]|[EV]}TE{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}T{NN|[MP]|[D{I|L}]|[EV]}[RK]GP 3.0233;2.3147;1.7749;1.211;1.0663;0.50246;0.3931 -;-;-;-;-;-;- 267 1 1.996 65843.6 0.6000000238418579 3913 3467 7367 DOHH2_400M_050219_2,7382 DOHH2_400M_050219_2,7382,DLRTKATIEL False True DLRTKATIEL 40.235511 580.338305652142 5222471.0 7367.0 nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4 4.0792774359385175 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7384 40.241 95.0 583630.0 25 0 102260.0 + 44117 YLDDPDLKY 9 71 571.2739964826986 1140.5334400321972 2 571.2744018435478 MULTI CID FTMS 0 0 0 7383 398077.78125 0.0830823934386917 4 -0.2942771911621094 1 Unmodified _YLDDPDLKY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 31.26834338654808 0.1333407332142048 2 Y{I|L}DD[DP]{I|L}KY 9 0 + 78.906 0.0 0.0 6.9183 6.9183 96.056 0.0 0.0 0.0 56.510234424404686 13.46787486224656 13.46787486224656 78.90600959017256 0 0.7302046884880937 2.0 0.0 0.0 + + Y{I|L}DD[DP]{I|L}KY 6.9183 + + 93 + 1 2.009 49437.6 1.0 3914 3468 7383 DOHH2_400M_050219_2,7384 DOHH2_400M_050219_2,7384,YLDDPDLKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7385 40.248 343.0 248490.0 25 0 10601.0 -1 0 98 946.433918239842 1890.853283546484 2 946.4347411990166 MULTI CID FTMS 0 0 0 7383 271089.25 0.6688190533404963 2 -0.1754837036132812 2 2 [MN]PN{I|L}NEWS[HT]EN{I|L} 14 -1 75.68 0.0 0.0 4.0024 0.0 0.0 0.0 208.0731600397094 208.0731600397094 50.4203797715149 0.0 0.0 0.0 0 1.23239816956497 1.5228787452803376 0.0 1.0994850021680094 [MN]PN{I|L}NEWS[HT]EN{I|L} 4.0024 - 1806 + 1 2.009 60099.7 1.0 3915 3468 7383 DOHH2_400M_050219_2,7385 DOHH2_400M_050219_2,7385, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7386 40.25 88.0 762420.0 25 0 113520.0 + 28175 PPVPKAAT 8 94 390.73321681738383 779.4518807015677 2 390.7328063845634 MULTI CID FTMS 0 0 0 7383 623348.5 0.7429388570486583 -1 0.1131668090820312 3 Unmodified _PPVPKAAT_ REV__ENST00000438047.1_1_7:157655587-157655827:+|nuORF 2.302733041254933 0.8103549651115762 2 C 1 -1 7.4743 0.0 0.0 0.95891 0.0 0.0 390.2261859767614 283.1928804986938 673.4190664754552 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 C 0.95891 - 5 + 1 2.009 56032.4 1.0 3916 3468 7383 DOHH2_400M_050219_2,7386 DOHH2_400M_050219_2,7386,PPVPKAAT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7387 40.254 224.0 419800.0 25 0 29537.0 + 24327 MEFLKGSGDY 10 108 573.7602137957675 1145.505874658335 2 573.7606689333916 MULTI CID FTMS 0 0 0 7383 292071.90625 0.5802684173412344 -1 0.1131668090820312 4 Unmodified _MEFLKGSGDY_ ENST00000470661.1_1_6:64237905-64286433:+|nuORF 45.739877483867886 0.1051543674217965 2 ME{M(Oxidation (M))|F}{I|L}K[NS]DY 9 2 + 85.741 0.0 0.0 7.485 7.485 96.1 0.0 0.0 0.0 42.828920627517846 14.973024840566469 14.973024840566469 28.57840941039747 0 1.0 2.0 1.066901560044258 0.0 ME{M(Oxidation (M))|F}{I|L}K[NS]DY;M{M(Oxidation (M))|F}E{I|L}K[NS]DY;[MT]{[HG]|PP}[QA]{I|L}EEM;[K{I|L}]{M(Oxidation (M))|F}GS[DG]EMY;[{M(Oxidation (M))|F}E][PA]{I|L}{M(Oxidation (M))|F}EMY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KGS[DG]EMY;M{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QGK{[QN]|[E{I|L}]|[KN]};[SG][DG]K{I|L}{M(Oxidation (M))|F}EMY;{NN|[MP]|[D{I|L}]|[EV]}{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}EMY;{[ET]|[MV]}[DV]{I|L}{M(Oxidation (M))|F}EMY 7.485;4.9901;3.3141;2.5584;2.5349;2.4386;2.3566;2.3168;2.3051;2.1401 -;-;-;-;-;-;-;-;-;- 767 + 1 2.009 73306.0 1.0 3917 3468 7383 DOHH2_400M_050219_2,7387 DOHH2_400M_050219_2,7387,MEFLKGSGDY True True MEFLKGSGDY 40.253896 573.760668933392 3676412.25 7383.0 ENST00000470661.1_1_6:64237905-64286433:+|nuORF 7.281200408935547 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7388 40.257 135.0 1016300.0 25 0 86566.0 + 10542 FVDPYPVNKY 10 122 621.3142510245009 1240.6139491158017 2 621.3145629763603 MULTI CID FTMS 0 0 0 7383 210389.671875 0.971215536749224 2 -0.1754837036132812 5 Unmodified _FVDPYPVNKY_ ENSG00000174010|ENST00000328046|KLHL15 34.40172386719151 0.2166836008404837 2 EE{I|L}A{I|L} 5 10 34.028 0.0 0.0 2.7428 0.0 0.0 0.0 682.3020344031642 682.3020344031642 4.643331241078172 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.674742501084005 0.0 EE{I|L}A{I|L} 2.7428 - 720 1 2.009 103319.5 1.0 3918 3468 7383 DOHH2_400M_050219_2,7388 DOHH2_400M_050219_2,7388,FVDPYPVNKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7389 40.262 316.0 374810.0 25 0 51987.0 + 13769 HSDPSILGY 9 121 494.7403502505754 987.4661475679508 2 494.7402526736259 MULTI CID FTMS 0 0 0 7383 193790.84375 0.213333087937318 -3 0.3318023681640625 6 Unmodified _HSDPSILGY_ ENSG00000146830|ENST00000678049|GIGYF1 74.42276476219924 0.019389277360085 2 [HS]DPS{I|L}{I|L}GY 9 0 + 66.449 0.0 0.0 6.7293 6.7293 93.216 0.0 0.0 0.0 3.65279269351241 48.974856131339166 3.65279269351241 18.935078169319297 0 0.8807196863200843 0.0 1.6549471895720984 0.0 + + [HS]DPS{I|L}{I|L}GY;[HT]{I|L}{I|L}S[DC]S{I|L};[HS]D{I|L}[PS]{I|L}GY;[PS][HD]S{I|L}{I|L}GY;[HT]{I|L}[PS][DV]GY;[HT]{I|L}{I|L}S[{M(Oxidation (M))|F}E]AA;[HT]{I|L}{I|L}S{[ES]|[DT]|[{I|L}C]}{[DS]|[MA]|[CV]|TT};{[TV]|[{I|L}S]}[HD][PS]{I|L}GY;[HT]{I|L}AA[{M(Oxidation (M))|F}E]S{I|L};[HT]{I|L}[PS]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L} 6.7293;4.8117;4.4003;4.1894;3.4463;3.3358;3.0071;2.8254;2.5629;2.4827 +;-;-;-;-;-;-;-;-;- + 972 1 2.009 95435.4 1.0 3919 3468 7383 DOHH2_400M_050219_2,7389 DOHH2_400M_050219_2,7389,HSDPSILGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7390 40.267 242.0 664410.0 25 0 94679.0 + 6951 EEIAIIPSKKL 11 98 414.25526659359736 1239.743970380992 3 414.2560302615166 MULTI CID FTMS 0 0 0 7383 198148.25 0.320704617655196 -1 0.1131668090820312 7 Unmodified _EEIAIIPSKKL_ ENSG00000182774|ENST00000647841|RPS17;ENST00000559273.1_1_15:83208730-83209179:-|nuORF;ENST00000560639.1_1_15:83207600-83209179:-|nuORF 59.05245873256422 0.0729907235015292 2 EE{I|L}A{I|L}{I|L}PSKK{I|L} 11 0 EE{I|L} + + 43.714 22.012 5.9305 3.526 3.526 50.208 0.0 0.0 0.0 0.0 21.70178264569621 0.0 0.0 0 0.9604093769761874 0.0 0.4247425010840047 0.0 + + EE{I|L}A{I|L}{I|L}PSKK{I|L} 3.526 + + 324 + 1 2.009 133898.7 1.0 3920 3468 7383 DOHH2_400M_050219_2,7390 DOHH2_400M_050219_2,7390,EEIAIIPSKKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7391 40.27 139.0 442910.0 25 0 42520.0 + 43099 VYNSSLRPGP 10 97 545.2860392297839 1088.5575255263675 2 545.2860595583916 MULTI CID FTMS 0 0 0 7383 162216.109375 0.4110889464927864 -1 0.1131668090820312 8 Unmodified _VYNSSLRPGP_ REV__ENSG00000283434|ENST00000637986|CSNKA2IP 13.90604991867851 0.6142120002215601 2 VYMATT{I|L}KY 9 -1 + 78.515 0.0 0.0 7.2128 7.2128 94.228 0.0 0.0 0.0 62.31730022313528 12.587418566968154 12.587418566968154 17.501225267833995 0 0.4247425010840047 2.0 0.4247425010840047 0.0 VYMATT{I|L}KY;VYMATT[YK]{I|L};VYMA[KQ][VP][PG];[QA]{[HG]|PP}ATT{I|L}KY;[QA][HQ]TT{I|L}KY;[PS]A{I|L}[KQ]AM{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[PS]{I|L}A[KQ]AM{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[QA]{[HG]|PP}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}KY;[QA]{[HG]|PP}ATT[YK]{I|L};[C(Carbamidomethyl (C))R]{[QV]|[N{I|L}]|[RA]|[KV]}[HV]KY 7.2128;5.605;3.9143;2.3032;1.7031;1.6376;1.4143;0.97201;0.69547;0.53866 -;-;-;-;-;-;-;-;-;- 211 + 1 2.009 51970.3 1.0 3921 3468 7383 DOHH2_400M_050219_2,7391 DOHH2_400M_050219_2,7391,VYNSSLRPGP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7392 40.284 800.0 112960.0 25 0 6233.5 + 32797 SEETLANNTW 10 143 582.7609075883452 1163.5072622434902 2 582.7624999880791 MULTI CID FTMS 0 0 0 7383 89910.0 1.0 0 0.0 9 Unmodified _SEETLANNTW_ ENSG00000164944|ENST00000297591|VIRMA;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA 25.399314129420983 0.3980215340001851 2 EEST 4 7 20.743 0.0 0.0 1.7828 0.0 0.0 0.0 714.3183638882746 714.3183638882746 1.8106930237712435 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.9386218330464624 0.0 EEST 1.7828 - 829 1 2.009 72525.6 0.5600000023841858 3922 3468 7383 DOHH2_400M_050219_2,7392 DOHH2_400M_050219_2,7392,SEETLANNTW False True SEETLANNTW 40.283556 582.762499988079 810690.8125 7383.0 nc|ENSG00000164944|Q69YN4-2|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA;;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;;nc|ENSG00000164944|Q69YN4-4|VIRMA;;ENSG00000164944|ENST00000297591|VIRMA 4.855326255162557 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7393 40.292 476.0 705590.0 25 0 53329.0 + 4800 DENSVIKSF 9 179 519.7585016525774 1037.5024503719546 2 519.7590209841728 MULTI CID FTMS 0 0 0 7383 228980.578125 0.0867287188636665 -2 0.2289085388183593 10 Unmodified _DENSVIKSF_ ENSG00000130935|ENST00000253247|NOL11 128.57297698046145 0.0057676723676998 2 {I|L}NSV{I|L}KS{M(Oxidation (M))|F} 8 2 89.388 0.0 0.0 8.6157 0.0 0.0 130.9724439440226 0.0 130.9724439440226 0.0 44.74357333510567 0.0 0.0 0 2.2658715643802765 0.0 1.506625672816984 0.3807196863200844 {I|L}NSV{I|L}KS{M(Oxidation (M))|F} 8.6157 - 1375 + 1 2.009 252985.3 1.0 3923 3468 7383 DOHH2_400M_050219_2,7393 DOHH2_400M_050219_2,7393,DENSVIKSF True True DENSVIKSF 40.291981 519.759020984173 37141016.0 7383.0 ENSG00000130935|ENST00000253247|NOL11 7.268533865610759 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7394 40.297 243.0 352640.0 25 0 48872.0 + 567 AEILLSNHY 9 104 530.2772889204035 1058.540024907607 2 530.2776367068291 MULTI CID FTMS 0 0 0 7383 162975.375 0.767527277752489 -1 0.1131668090820312 11 Unmodified _AEILLSNHY_ ENSG00000132182|ENST00000254508|NUP210 69.10491478415734 0.0214449631113747 2 {[CP]|[EA]}{I|L}{I|L}{I|L}SNHY 9 0 + 71.894 0.0 0.0 6.7918 6.7918 93.694 0.0 0.0 0.0 57.05112052208703 11.382805414149786 11.382805414149786 20.590292461168204 0 1.305462187404089 0.0 0.7614393726401688 1.1382104921644451 + + {[CP]|[EA]}{I|L}{I|L}{I|L}SNHY;{[CP]|[EA]}{I|L}{I|L}{I|L}SGGHY;{[CP]|[EA]}{I|L}{I|L}C{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[PG];{[CP]|[EA]}{I|L}{I|L}[WK]HY;{[CP]|[EA]}{I|L}{I|L}C{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A[VP];{[CP]|[EA]}{I|L}{I|L}{I|L}S[DC][VP];{[CP]|[EA]}{I|L}{I|L}C{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PG]{I|L};{[CP]|[EA]}VVM{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[PG];{[CP]|[EA]}VVM{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A[VP];{[CP]|[EA]}WAA[RV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.7918;4.8467;4.3273;4.1515;3.667;3.6441;3.2301;0.69972;0.039404;0.033265 +;-;-;-;-;-;-;-;-;- + 428 + 1 2.009 69717.9 1.0 3924 3468 7383 DOHH2_400M_050219_2,7394 DOHH2_400M_050219_2,7394,AEILLSNHY True True AEILLSNHY 40.296533 530.277636706829 1633045.0 7383.0 ENSG00000132182|ENST00000254508|NUP210 7.174130280812581 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7395 40.31 800.0 132910.0 25 0 4429.3 + 10517 FVDEGSLY 8 117 929.4264338200124 928.4191573534124 1 929.4261962771416 MULTI CID FTMS 0 0 0 7383 91719.03125 0.9579802118125288 -1 0.1131668090820312 12 Unmodified _FVDEGSLY_ ENSG00000011260|ENST00000225298|UTP18 70.71552829651908 0.111000043122623 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}{M(Oxidation (M))|F}VY 8 4 + 50.628 0.0 0.0 5.4531 5.4531 73.575 0.0 0.0 0.0 0.1401436180012183 10.076833818782944 0.1401436180012183 0.1401436180012183 0 0.0 0.0 1.805462187404089 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}{M(Oxidation (M))|F}VY;[{M(Oxidation (M))|F}V]DEGS{I|L}Y;[{M(Oxidation (M))|F}V]DWS{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}V{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{M(Oxidation (M))|F}VS{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GV{M(Oxidation (M))|F}S{I|L}Y;[{M(Oxidation (M))|F}V]DTGD{I|L}Y;[{M(Oxidation (M))|F}V]DEGTVY;[{M(Oxidation (M))|F}V]DWTVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS[{M(Oxidation (M))|F}V]{I|L}Y 5.4531;5.438;5.3961;5.014;4.962;4.8274;4.7259;4.6089;4.5669;4.5622 -;+;-;-;-;-;-;-;-;- + 1061 1 2.009 71543.0 0.5799999833106995 3925 3468 7383 DOHH2_400M_050219_2,7395 DOHH2_400M_050219_2,7395,FVDEGSLY True True FVDEGSLY 40.310381 929.426196277142 916177.375 7383.0 ENSG00000011260|ENST00000225298|UTP18 7.684816201527913 1.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7396 40.319 428.0 231610.0 25 0 20625.0 11441 GHSSFLVEDL 10 153 368.5170861191419 1102.5294289576257 3 368.5171691775322 MULTI CID FTMS 0 0 0 7383 94404.4140625 1.0 0 0.0 13 Unmodified _GHSSFLVEDL_ ENSG00000109851|ENST00000524983|DBX1 10.073929032068715 0.6785112666868882 2 {I|L} 1 9 13.979 0.0 0.0 1.2679 0.0 0.0 971.4345936078196 0.0 971.4345936078196 0.0 -5.942124970647033 -5.942124970647033 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2679 + + 31 + 1 2.009 81015.0 1.0 3926 3468 7383 DOHH2_400M_050219_2,7396 DOHH2_400M_050219_2,7396,GHSSFLVEDL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7398 40.325 64.0 813480.0 25 0 83588.0 + 38583 TTDFPGNYSGY 11 74 611.2563810020872 1220.4982090709743 2 611.2572509646416 MULTI CID FTMS 0 0 0 7397 533010.6875 0.4479301137986495 8 -0.6813507080078125 1 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 39.94969957227396 0.2131707853268865 2 TPGY 4 7 23.443 0.0 0.0 1.9208 0.0 0.0 784.3021163969494 0.0 784.3021163969494 0.0 10.08694898399245 0.0 0.0 0 0.0 0.0 0.0 0.0 TPGY 1.9208 - 193 + 1 2.019 44335.0 1.0 3927 3469 7397 DOHH2_400M_050219_2,7398 DOHH2_400M_050219_2,7398,TTDFPGNYSGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7399 40.329 208.0 353530.0 25 0 53225.0 + 25057 MPVEKNITL 9 91 522.7913871294418 1043.5682213256837 2 522.7919189333916 MULTI CID FTMS 0 0 0 7397 187974.96875 0.5443540184033534 1 -0.0915184020996093 2 Unmodified _MPVEKNITL_ ENSG00000170571|ENST00000303221|EMB;ENST00000505896.5_1_5:49695109-49707239:-|nuORF;nc|ENSG00000170571|Q6PCB8-2|EMB 31.26834338654808 0.1333407332142048 2 MPVE 4 5 49.457 0.0 0.0 4.7392 0.0 0.0 0.0 584.3443697565061 584.3443697565061 12.689709983288836 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 0.0 0.0 + MPVE 4.7392 + + 252 + 1 2.019 62016.0 1.0 3928 3469 7397 DOHH2_400M_050219_2,7399 DOHH2_400M_050219_2,7399,MPVEKNITL False True MPVEKNITL 40.328883 522.791918933392 6232004.0 7397.0 nc|ENSG00000170571|Q6PCB8-2|EMB;;ENST00000505896.5_1_5:49695109-49707239:-|nuORF;;ENSG00000170571|ENST00000303221|EMB 5.656003316243489 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7400 40.33 24.0 3668400.0 25 0 455260.0 + 12444 GTVYEDLRY 9 79 558.2720860411114 1114.529619149023 2 558.2722656130791 MULTI CID FTMS 0 0 0 7397 2185990.25 0.2092383899215946 -2 0.1971321105957031 3 Unmodified _GTVYEDLRY_ chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-2|UBE2C 69.10491478415734 0.0214449631113747 2 {[SA]|[TG]}VYED{I|L}RY 9 0 + 80.204 0.0 0.0 7.1962 7.1962 94.006 0.0 0.0 0.0 56.7708332860846 12.252684618815096 12.252684618815096 16.364554064455135 0 0.6694451763165201 1.6989700043360187 0.4247425010840047 0.6109243748081782 + + {[SA]|[TG]}VYED{I|L}RY;{[SA]|[TG]}VYEDY[R{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YY{[HG]|PP}RY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE[R{M(Oxidation (M))|F}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 7.1962;5.7279;2.4115;1.9805 +;-;-;- + 169 + 1 2.019 75475.6 1.0 3929 3469 7397 DOHH2_400M_050219_2,7400 DOHH2_400M_050219_2,7400,GTVYEDLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7401 40.331 46.0 1785900.0 25 0 162500.0 + 35147 SRGDFVVEY 9 62 536.2588183568016 1070.5030837804031 2 536.2590820193291 MULTI CID FTMS 0 0 0 7397 1170424.25 0.1655081758623686 -2 0.1971321105957031 4 Unmodified _SRGDFVVEY_ ENSG00000183955|ENST00000402868|KMT5A;ENST00000437519.5_1_12:123868737-123892247:+|nuORF;nc|ENSG00000183955|Q9NQR1|KMT5A 24.99096001346401 0.2132109383330889 2 [YE][RN]VVEY 8 5 + 47.708 0.0 0.0 4.4566 4.4566 78.262 0.0 0.0 0.0 0.9421249706470292 36.73902187720806 0.9421249706470292 6.817496819840656 0 0.8807196863200843 0.0 0.0 0.3494850021680094 [YE][RN]VVEY;[YE][RN]VEVY;[YE]{[QD]|[EN]|[WG]|[KD]|[RS]}[KP]EY 4.4566;3.8198;2.2141 -;-;- 79 1 2.019 71652.3 1.0 3930 3469 7397 DOHH2_400M_050219_2,7401 DOHH2_400M_050219_2,7401,SRGDFVVEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7402 40.333 80.0 1355100.0 25 0 96205.0 + 6953 EEIAIIPSKKL 11 113 620.8792078984225 1239.7438628636448 2 620.8795043826103 MULTI CID FTMS 0 0 0 7397 615098.375 1.0 0 0.0 5 Unmodified _EEIAIIPSKKL_ ENSG00000182774|ENST00000647841|RPS17;ENST00000559273.1_1_15:83208730-83209179:-|nuORF;ENST00000560639.1_1_15:83207600-83209179:-|nuORF 79.42699986076722 0.0080827643292781 2 EE{I|L}A{I|L}{I|L}PSK[K{I|L}] 11 0 + 70.27 0.0 0.0 5.6681 5.6681 91.322 0.0 0.0 0.0 50.88486687798661 4.736385658588532 4.736385658588532 43.73835032203424 0 1.7302046884880935 1.3979400086720375 0.6549471895720984 0.0 + + EE{I|L}A{I|L}{I|L}PSK[K{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KG]{I|L}{I|L}PSK[K{I|L}] 5.6681;2.1401 +;- + 506 + 1 2.019 82015.4 1.0 3931 3469 7397 DOHH2_400M_050219_2,7402 DOHH2_400M_050219_2,7402,EEIAIIPSKKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7403 40.335 74.0 868470.0 25 0 96969.0 + 35373 STDWHVVNY 9 90 560.7562775415855 1119.498002149971 2 560.7565185427666 MULTI CID FTMS 0 0 0 7397 620844.375 0.835167165263807 -1 0.0839653015136718 6 Unmodified _STDWHVVNY_ ENSG00000147251|ENST00000276202|DOCK11 58.6788170122104 0.0268135626297836 2 [WH]D{[MG]|[TS]}VVNY 9 4 + 48.539 0.0 0.0 4.3358 4.3358 74.505 0.0 0.0 0.0 3.959354596443049 12.74227503252014 3.959354596443049 3.959354596443049 0 0.805462187404089 0.0 0.6382104921644451 0.0 [WH]D{[MG]|[TS]}VVNY;[HV]WD{[MG]|[TS]}VNY;[WH]DV{[MG]|[TS]}VNY;[WH]D{[MG]|[TS]}VVGGY;[WH]D{[WT]|[RM]}VNY;[HV]WDV{[MG]|[TS]}NY;[WH]VD{[MG]|[TS]}VNY;[HV]WH[HQ]NY;[HV]WD{[MG]|[TS]}VGGY;[HV]VDW{[MG]|[TS]}NY 4.3358;3.9822;3.5401;3.5133;3.4993;3.4011;3.2712;3.2029;3.1596;3.1572 -;-;-;-;-;-;-;-;-;- 1052 1 2.019 55143.2 1.0 3932 3469 7397 DOHH2_400M_050219_2,7403 DOHH2_400M_050219_2,7403,STDWHVVNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7404 40.339 223.0 282860.0 25 0 20601.0 + 8492 ETDKNGFLQY 10 101 607.7877086235569 1213.5608643139135 2 607.7881347537041 MULTI CID FTMS 0 0 0 7397 239615.296875 0.7541407129337813 -1 0.0839653015136718 7 Unmodified _ETDKNGFLQY_ ENSG00000106733|ENST00000361092|NMRK1;nc|ENSG00000106733|Q9NWW6-2|NMRK1 36.12702656103203 0.1984647928738587 2 {I|L}{M(Oxidation (M))|F}GNHHY 7 8 45.789 0.0 0.0 3.7731 0.0 0.0 327.1454874005262 0.0 327.1454874005262 0.0 17.96797627904318 0.0 0.0 0 0.0 0.0 0.0 1.2302046884880935 {I|L}{M(Oxidation (M))|F}GNHHY 3.7731 - 1163 + 1 2.019 53269.4 1.0 3933 3469 7397 DOHH2_400M_050219_2,7404 DOHH2_400M_050219_2,7404,ETDKNGFLQY False True ETDKNGFLQY 40.339106 607.788134753704 2423128.25 7397.0 nc|ENSG00000106733|Q9NWW6-2|NMRK1;;ENSG00000106733|ENST00000361092|NMRK1 6.841830571492513 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7405 40.344 251.0 313460.0 25 0 30267.0 + 33509 SIKKLITSM 9 121 510.81006496474544 1019.6055769962908 2 510.8100158572197 MULTI CID FTMS 0 0 0 7397 220103.125 1.0 0 0.0 8 Unmodified _SIKKLITSM_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 61.60191391372663 0.0251951588191061 2 {[TV]|[{I|L}S]}KK{I|L}{I|L}TSM 9 0 + 51.109 0.0 0.0 5.0127 5.0127 81.393 0.0 0.0 0.0 13.092208971043078 5.297181698106428 5.297181698106428 8.010299956639813 0 2.061243137115873 2.0 0.535666875892183 0.0 + + {[TV]|[{I|L}S]}KK{I|L}{I|L}TSM;{[TV]|[{I|L}S]}KK{I|L}T{I|L}SM;{[TV]|[{I|L}S]}KK{I|L}TS{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[TV]|[{I|L}S]}KK{I|L}TM{[TV]|[{I|L}S]};[{I|L}T][K{I|L}]KVTSM;KK{I|L}{I|L}TVTSM;KK{I|L}S{I|L}{I|L}TSM;KK{I|L}{I|L}S{I|L}TSM;[{I|L}T][K{I|L}]KS{I|L}SM;KK{I|L}{I|L}TS{I|L}SM 5.0127;4.227;3.302;3.0636;3.0407;2.6934;2.6852;2.6546;2.255;1.9078 +;-;-;-;-;-;-;-;-;- + 426 1 2.019 61530.4 1.0 3934 3469 7397 DOHH2_400M_050219_2,7405 DOHH2_400M_050219_2,7405,SIKKLITSM True True SIKKLITSM 40.34377 510.81001585722 1825378.625 7397.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 5.263001124064128 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7406 40.347 147.0 385670.0 25 0 29766.0 + 25481 NELERNITI 9 99 551.2984533601308 1100.5823537870615 2 551.2990600466728 MULTI CID FTMS 0 0 0 7397 212410.0 0.6014729943658806 1 -0.0915184020996093 9 Unmodified _NELERNITI_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 65.47368725323818 0.0230515101691092 2 {NN|[MP]|[D{I|L}]|[EV]}H[Y{I|L}]N{I|L}T{I|L} 9 4 + 43.846 0.0 0.0 3.9839 3.9839 71.078 0.0 0.0 0.0 4.2714628708620594 20.65844813936952 4.2714628708620594 2.302046884880937 0 0.6989700043360187 1.6989700043360187 0.6989700043360187 0.7302046884880937 {NN|[MP]|[D{I|L}]|[EV]}H[Y{I|L}]N{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}QERN{I|L}T{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ERN{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}H[Y{I|L}]GG{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}H[Y{I|L}]NT{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QERGG{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]ERN{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}QERNT{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ERGG{I|L}T{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ERNT{I|L}{I|L} 3.9839;3.7747;3.5493;3.1472;3.0201;2.9381;2.9381;2.8109;2.7127;2.5855 -;-;+;-;-;-;-;-;-;- + 578 1 2.019 50920.6 1.0 3935 3469 7397 DOHH2_400M_050219_2,7406 DOHH2_400M_050219_2,7406,NELERNITI True True NELERNITI 40.346724 551.299060046673 1991829.5 7397.0 ENSG00000180574|ENST00000538173|EIF2S3B;;ENSG00000130741|ENST00000253039|EIF2S3;;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 5.199389139811198 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7407 40.352 299.0 263870.0 25 0 25008.0 + 31853 RTGIPISM 8 95 437.74419068108216 873.4738284289643 2 437.7441894412041 MULTI CID FTMS 0 0 0 7397 186325.359375 0.9708868044795468 -1 0.0839653015136718 10 Unmodified _RTGIPISM_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 26.268140514670165 0.4916104673212489 2 [{I|L}P]S{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SM 8 4 + 44.218 0.0 0.0 5.0624 5.0624 72.672 0.0 0.0 0.0 0.3966067227434564 12.140012553530966 0.3966067227434564 0.3966067227434564 0 1.0 1.6989700043360187 0.2614393726401688 0.0 [{I|L}P]S{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SM;[WK]{I|L}P{I|L}SM;[{I|L}P][WK]{I|L}SM;{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}SM;{[TV]|[{I|L}S]}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SM 5.0624;5.017;4.5755;3.1164;2.539 -;-;-;-;- 79 1 2.019 67995.0 1.0 3936 3469 7397 DOHH2_400M_050219_2,7407 DOHH2_400M_050219_2,7407,RTGIPISM False True RTGIPISM 40.352183 437.744189441204 1520177.75 7397.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 4.188577651977539 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7408 40.356 210.0 219280.0 25 0 12029.0 + 28438 PTAVVPLRY 9 73 508.2999385496113 1014.5853241660226 2 508.3000671267509 MULTI CID FTMS 0 0 0 7397 144097.53125 0.8767210618104452 -1 0.0839653015136718 11 Unmodified _PTAVVPLRY_ ENSG00000113441|ENST00000231368|LNPEP;nc|ENSG00000113441|Q9UIQ6-2|LNPEP;nc|ENSG00000113441|Q9UIQ6-3|LNPEP 49.93300154707207 0.0405168250806675 2 PTAVV 5 4 71.454 0.0 0.0 7.0426 0.0 0.0 0.0 544.2884777116544 544.2884777116544 60.48455006504028 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.0 0.0 + PTAVV 7.0426 + + 80 + 1 2.019 43131.2 1.0 3937 3469 7397 DOHH2_400M_050219_2,7408 DOHH2_400M_050219_2,7408,PTAVVPLRY True True PTAVVPLRY 40.356158 508.300067126751 1492011.5 7397.0 nc|ENSG00000113441|Q9UIQ6-2|LNPEP;;nc|ENSG00000113441|Q9UIQ6-3|LNPEP;;ENSG00000113441|ENST00000231368|LNPEP 7.292226314544678 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7409 40.363 382.0 234650.0 25 0 19688.0 + 24453 MHIPTGVI 8 129 434.2428106256922 866.4710683181844 2 434.2411682009697 MULTI CID FTMS 0 0 0 7397 135148.375 0.3217152999602761 6 -0.4922561645507812 12 Unmodified _MHIPTGVI_ REV__ENSG00000133059|ENST00000367162|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-3|DSTYK 2.889219685676258 0.8067950007271085 2 M 1 -1 9.8329 0.0 0.0 1.1348 0.0 0.0 717.420132504511 0.0 717.420132504511 0.0 2.843181179205061 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.1348 + + 7 + 1 2.019 75532.3 1.0 3938 3469 7397 DOHH2_400M_050219_2,7409 DOHH2_400M_050219_2,7409,MHIPTGVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7410 40.368 291.0 257000.0 25 0 28304.0 -1 0 118 479.277350532607 478.270074066007 1 479.2774536013603 MULTI CID FTMS 0 0 0 -1 0 13 2 {I|L} 1 -1 10.969 0.0 0.0 2.2935 0.0 0.0 347.1752844925679 0.0 347.1752844925679 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.2935 - 26 + 1 2.019 60704.3 1.0 3939 3469 7397 DOHH2_400M_050219_2,7410 DOHH2_400M_050219_2,7410, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7411 40.382 800.0 173010.0 25 0 21554.0 + 5773 DPPLKFMSV 9 160 525.2697935221267 1048.5250341110534 2 525.2701293826103 MULTI CID FTMS 0 0 0 7397 103249.734375 0.7322029514902108 -3 0.3128738403320312 14 Oxidation (M) _DPPLKFM(Oxidation (M))SV_ ENSG00000169813|ENST00000682386|HNRNPF 49.55428908609986 0.0413471690215031 2 DPP{I|L}K{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV 9 0 + 73.045 0.0 0.0 6.9664 6.9664 92.147 0.0 0.0 0.0 30.85625774441256 11.18936948991901 11.18936948991901 11.18936948991901 0 0.9247425010840048 2.0 0.5501648626366046 0.0 + + DPP{I|L}K{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV;DPP[KS][KS]QY;DPP{I|L}K{M(Oxidation (M))|F}{[DA]|[EG]}{M(Oxidation (M))|F};DPP{I|L}K{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Y;DPP{I|L}K{[CT]|[{M(Oxidation (M))|F}G]}Y{I|L};DPP[KS]{[ET]|[MV]}{I|L}Y;DPP[KS]{[ET]|[MV]}Y{I|L};DPRR{[ET]|[MV]}{I|L}Y;DPP{I|L}[MT][KT]{M(Oxidation (M))|F};DPP[DV][RH]T{I|L} 6.9664;5.8993;5.6335;5.588;5.3316;5.1544;4.898;4.5147;4.4832;4.2974 +;-;-;-;-;-;-;-;-;- + 1133 + 1 2.019 112541.4 0.5199999809265137 3940 3469 7397 DOHH2_400M_050219_2,7411 DOHH2_400M_050219_2,7411,DPPLKFMSV True False DPPLKFMSV 40.382158 525.27012938261 1740543.875 7397.0 ENSG00000169813|ENST00000682386|HNRNPF 6.336736043294271 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7412 40.396 800.0 333750.0 25 0 37402.0 + -1 AIDHNQMFQY 10 143 632.9766507264328 1895.9081227794984 3 633.3101074099541 MULTI CID FTMS 0 0 0 7397 92870.984375 0.3999949796575184 -5 0.5005111694335938 15 ENSG00000087502|ENST00000360150|ERGIC2 2 [DP]ETYVSRT 9 -1 40.575 0.0 0.0 2.1401 0.0 0.0 0.0 844.3795556065446 844.3795556065446 13.67046012758685 0.0 0.0 0.0 0 0.3494850021680094 1.154901959985743 0.9489700043360187 0.0 [DP]ETYVSRT 2.1401 - 4321 1 2.019 193838.2 0.5699999928474426 3941 3469 7397 DOHH2_400M_050219_2,7412 DOHH2_400M_050219_2,7412, False False AIDHNQMFQY 40.395995 632.9761 1228726.875 7397.0 ENSG00000087502|ENST00000360150|ERGIC2 4.853124141693115 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7413 40.411 800.0 127050.0 25 0 19722.0 + 38464 TSDHFETIMKY 11 114 686.3165682941902 1370.6185836551804 2 686.3163329958916 MULTI CID FTMS 0 0 0 7397 83811.640625 0.7742917211502103 -1 0.0839653015136718 16 Unmodified _TSDHFETIMKY_ ENSG00000136628|ENST00000366923|EPRS1 59.36838082759317 0.0717085717264091 2 M{I|L}TE{M(Oxidation (M))|F}MKY 8 7 64.762 0.0 0.0 4.725 0.0 0.0 309.1681394620408 0.0 309.1681394620408 0.0 53.79284113160488 0.0 0.0 0 0.2614393726401688 0.0 1.3494850021680094 0.3807196863200844 M{I|L}TE{M(Oxidation (M))|F}MKY 4.725 - 783 + 1 2.019 78748.1 0.5799999833106995 3942 3469 7397 DOHH2_400M_050219_2,7413 DOHH2_400M_050219_2,7413,TSDHFETIMKY True True TSDHFETIMKY 40.411003 686.316332995892 899137.125 7397.0 ENSG00000136628|ENST00000366923|EPRS1 7.4454450607299805 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7415 40.416 45.0 1075800.0 25 0 204420.0 + 39242 VAAFAALT 8 72 382.2200932415714 762.4256335499429 2 382.2196838259697 MULTI CID FTMS 0 0 0 7414 1360839.0 0.7595135831090092 1 -0.0643272399902343 1 Unmodified _VAAFAALT_ REV__ENSG00000117600|ENST00000370185|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-3|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5|PLPPR4 0.0 0.8243325171867699 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.024 48045.3 1.0 3943 3470 7414 DOHH2_400M_050219_2,7415 DOHH2_400M_050219_2,7415,VAAFAALT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7416 40.418 83.0 551170.0 25 0 82374.0 41421 VPLFFPPP 8 80 457.2642121021641 912.5138712711282 2 457.2643920779228 MULTI CID FTMS 0 0 0 7414 549199.625 0.7692795388241656 9 -0.8075981140136719 2 Unmodified _VPLFFPPP_ ENST00000563518.5_1_15:41796702-41799561:-|nuORF 6.354104778181461 0.7857632046190106 2 W 1 8 3.9794 0.0 0.0 0.43609 0.0 0.0 653.3779287435876 70.03062616519765 723.4085549087853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.43609 - 11 + 1 2.024 43430.4 1.0 3944 3470 7414 DOHH2_400M_050219_2,7416 DOHH2_400M_050219_2,7416,VPLFFPPP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7417 40.421 182.0 284350.0 25 0 22813.0 + 13387 HLKLGEVSV 9 87 491.2910753247647 980.5675977163294 2 491.2911559939384 MULTI CID FTMS 0 0 0 7414 168747.21875 0.8138799873484792 -1 0.0915184020996093 3 Unmodified _HLKLGEVSV_ ENSG00000132780|ENST00000350030|NASP;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP;nc|ENSG00000132780|P49321-4|NASP 20.453626601364224 0.2830276176381075 2 SV 2 7 21.722 0.0 0.0 2.2152 0.0 0.0 776.4562218391794 0.0 776.4562218391794 0.0 11.80684181573442 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 + SV 2.2152 + + 24 + 1 2.024 43725.8 1.0 3945 3470 7414 DOHH2_400M_050219_2,7417 DOHH2_400M_050219_2,7417,HLKLGEVSV False True HLKLGEVSV 40.421476 491.291155993938 1242024.125 7414.0 nc|ENSG00000132780|P49321-3|NASP;;ENSG00000132780|ENST00000350030|NASP;;nc|ENSG00000132780|P49321-4|NASP;;nc|ENSG00000132780|P49321-2|NASP 1.8504274288813276 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7418 40.426 266.0 276600.0 25 0 29482.0 24656 MLRTTSPSL 9 89 503.2727686849788 1004.5309844367576 2 503.2728149294853 MULTI CID FTMS 0 0 0 7414 135721.75 1.0 0 0.0 4 Unmodified _MLRTTSPSL_ ENST00000534472.5_1_11:125479379-125479505:+|nuORF 19.256988751693697 0.3154191944385105 2 M{I|L}{I|L}Y 4 7 52.691 0.0 0.0 5.2453 0.0 0.0 0.0 481.2429598443969 481.2429598443969 37.7962253513872 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 M{I|L}{I|L}Y 5.2453 - 73 + 1 2.024 63014.8 1.0 3946 3470 7414 DOHH2_400M_050219_2,7418 DOHH2_400M_050219_2,7418,MLRTTSPSL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7419 40.44 800.0 198540.0 25 0 12709.0 + -1 EEKDMKMYKYF 11 128 772.3451867079478 1542.6758204826956 2 772.3450805544853 MULTI CID FTMS 0 0 0 7414 131845.09375 1.0 0 0.0 5 2 Oxidation (M) _EEKDM(Oxidation (M))KM(Oxidation (M))YKYF_ REV__ENSG00000182272|ENST00000329962|B4GALNT4 4.897010918128616 0.8520435188433833 2 ANQQAQ{[MG]|[TS]}{M(Oxidation (M))|F}Y 10 -1 61.036 0.0 0.0 3.9565 0.0 0.0 386.1863529907985 0.0 386.1863529907985 0.0 15.495818018618678 0.0 0.0 0 0.5 0.0 0.0 1.1421590589602533 ANQQAQ{[MG]|[TS]}{M(Oxidation (M))|F}Y 3.9565 - 4458 + 1 2.024 112808.0 0.6800000071525574 3947 3470 7414 DOHH2_400M_050219_2,7419 DOHH2_400M_050219_2,7419,EEKDMKMYKYF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7420 40.448 415.0 227340.0 25 0 32881.0 5475 DLRSIRQQI 9 118 564.8274120898352 1127.6402712464703 2 564.8281127810478 MULTI CID FTMS 0 0 0 7414 99127.3984375 1.0 0 0.0 6 Unmodified _DLRSIRQQI_ ENSG00000180071|ENST00000399703|ANKRD18A 17.11289562659939 0.3734572693229295 2 D{I|L}R 3 6 47.945 0.0 0.0 4.2518 0.0 0.0 0.0 740.4080294244749 740.4080294244749 33.64848121939808 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + D{I|L}R 4.2518 + + 284 + 1 2.024 76902.4 1.0 3948 3470 7414 DOHH2_400M_050219_2,7420 DOHH2_400M_050219_2,7420,DLRSIRQQI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7421 40.461 800.0 205810.0 25 0 22436.0 + 32507 SALIKAEL 8 156 422.7605558444018 843.5065587556036 2 422.7604553103447 MULTI CID FTMS 0 0 0 7414 91323.59375 0.4523912910549019 -1 0.0915184020996093 7 Unmodified _SALIKAEL_ ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF 49.93300154707207 0.1395624531867191 2 {[SA]|[TG]}{I|L}{I|L}K{I|L}{[CP]|[EA]} 8 2 + 51.539 0.0 0.0 6.1101 6.1101 92.686 0.0 0.0 0.0 26.20452423722624 7.448827157224457 7.448827157224457 36.4368785742186 0 0.8807196863200843 1.6989700043360187 1.341129063296272 0.0 {[SA]|[TG]}{I|L}{I|L}K{I|L}{[CP]|[EA]};{I|L}{I|L}KASAE{I|L};{I|L}{I|L}K[QT]E{I|L};[{I|L}A]K{I|L}SAE{I|L};{[HG]|PP}[HK]{I|L}[RP];[K{I|L}]{I|L}ASAE{I|L};[K{I|L}]A{I|L}SAE{I|L} 6.1101;1.7904;1.6431;0.63245;0.41313;0.13314;0.018248 -;-;-;-;-;-;- 419 + 1 2.024 132257.5 0.3899999856948852 3949 3470 7414 DOHH2_400M_050219_2,7421 DOHH2_400M_050219_2,7421,SALIKAEL False True SALIKAEL 40.461482 422.760455310345 1272539.375 7414.0 ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 0.5336452225844065 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7422 40.475 800.0 85571.0 25 0 5562.3 -1 0 83 964.4444617022658 2890.3115557069973 3 965.1088134646416 MULTI CID FTMS 0 0 0 7414 124521.6328125 0.2436476875834642 7 -0.5898323059082031 8 2 [NP]{I|L} 3 -1 5.6864 0.0 0.0 0.19674 0.0 0.0 0.0 2563.108469040565 2563.108469040565 2.19151233673003 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L} 0.19674 - 94 1 2.024 52105.3 0.6399999856948853 3950 3470 7414 DOHH2_400M_050219_2,7422 DOHH2_400M_050219_2,7422, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7424 40.492 800.0 181500.0 25 0 7849.3 + 4723 DEDPENKIEF 10 142 618.2753085114595 1234.5360640897188 2 618.2756225466728 MULTI CID FTMS 0 0 0 7423 138690.796875 0.3515691708575256 3 -0.2488441467285156 1 Unmodified _DEDPENKIEF_ ENSG00000113141|ENST00000417647|IK;ENST00000434096.1_1_2:58688403-58689123:-|nuORF 94.90867108109512 0.0089818344207408 2 [EP]NK{I|L}EDDE{M(Oxidation (M))|F} 10 6 + 73.814 0.0 0.0 5.9791 5.9791 80.003 0.0 0.0 0.0 3.109685181981604 16.53212513775344 3.109685181981604 3.109685181981604 0 0.6861818737241735 0.744727494896694 0.7614393726401688 0.6307196863200843 [EP]NK{I|L}EDDE{M(Oxidation (M))|F};[DP]QK{I|L}EDDE{M(Oxidation (M))|F};[EP]NK{I|L}DEDE{M(Oxidation (M))|F};[EP]GGK{I|L}EDDE{M(Oxidation (M))|F};[DP]QK{I|L}DEDE{M(Oxidation (M))|F};[QP]DK{I|L}EDDE{M(Oxidation (M))|F};[DP][AG]K{I|L}EDDE{M(Oxidation (M))|F};[EP]NKD{I|L}EDE{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PNK{I|L}EDE{M(Oxidation (M))|F};[EP]GGK{I|L}DEDE{M(Oxidation (M))|F} 5.9791;5.7272;5.3452;5.2367;5.0933;5.0778;4.9849;4.7609;4.6519;4.6028 -;-;-;-;-;-;-;-;-;- 1849 1 2.024 109138.8 0.7900000214576721 3951 3471 7423 DOHH2_400M_050219_2,7424 DOHH2_400M_050219_2,7424,DEDPENKIEF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7425 40.493 58.0 1222600.0 25 0 258970.0 + 28094 PPLAALAA 8 85 362.2222620001882 722.4299710671764 2 362.2222473025322 MULTI CID FTMS 0 0 0 7423 1011879.5625 0.2520355789814919 -3 0.2398109436035156 2 Unmodified _PPLAALAA_ REV__ENSG00000150281|ENST00000279804|CTF1;REV__nc|ENSG00000150281|Q16619-2|CTF1 0.7936320650641473 0.8195151834710337 2 A 1 -1 3.4949 0.0 0.0 0.48376 0.0 0.0 361.2004311275264 287.1659029596313 648.3663340871577 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.48376 + + 1 + 1 2.024 62530.3 1.0 3952 3471 7423 DOHH2_400M_050219_2,7425 DOHH2_400M_050219_2,7425,PPLAALAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7426 40.497 218.0 330900.0 25 0 52741.0 15907 ISTISPAKVS 10 114 501.7947483099927 1001.5749436867852 2 501.2908813357353 MULTI CID FTMS 0 0 0 7423 219541.921875 0.5020040599971803 -3 0.2398109436035156 3 Unmodified _ISTISPAKVS_ ENST00000596494.1_1_19:18648927-18650245:-|nuORF 8.745405648335112 0.6861838735306406 2 Y 1 10 13.495 0.0 0.0 1.3474 0.0 0.0 820.5002957149088 0.0 820.5002957149088 0.0 3.252574989159953 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3474 - 29 + 1 2.024 59254.2 1.0 3953 3471 7423 DOHH2_400M_050219_2,7426 DOHH2_400M_050219_2,7426,ISTISPAKVS False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7427 40.506 475.0 231000.0 25 0 19268.0 20708 LLSAAKVM 8 136 416.7514525961503 831.4883522591006 2 416.7516662478447 MULTI CID FTMS 0 0 0 7423 99128.3671875 0.1589181861658302 -3 0.2398109436035156 4 Unmodified _LLSAAKVM_ ENSG00000134780|ENST00000257215|DAGLA 18.13498045792455 0.6430038125133779 2 {[TV]|[{I|L}S]}AAK{I|L}VM 8 2 + 41.82 0.0 0.0 5.0296 5.0296 80.195 0.0 0.0 0.0 0.6694678963061307 24.830787802852043 0.6694678963061307 6.516445029729603 0 0.8935078169319297 0.0 1.4291746928241125 0.0 {[TV]|[{I|L}S]}AAK{I|L}VM;[QT]{I|L}K{I|L}VM;{[TV]|[{I|L}S]}AA{I|L}KVM;[QT]K{I|L}{I|L}VM;[QT]{I|L}{I|L}KVM;[{M(Oxidation (M))|F}T]{I|L}K[NP]{I|L};{[TV]|[{I|L}S]}A{I|L}AKVM;[{M(Oxidation (M))|F}T]K{I|L}[NP]{I|L};[{I|L}V][TA]AKVM 5.0296;4.2459;3.5522;3.0316;2.7685;2.3482;1.8916;1.2005;1.07 -;-;-;-;-;-;-;-;- 211 1 2.024 88851.1 1.0 3954 3471 7423 DOHH2_400M_050219_2,7427 DOHH2_400M_050219_2,7427,LLSAAKVM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7428 40.509 150.0 317560.0 25 0 72842.0 -1 0 62 575.3272883276561 574.3200118610561 1 575.3276855349541 MULTI CID FTMS 0 0 0 7423 454528.96875 0.7451053326552132 1 -0.0544662475585937 5 2 Y 1 -1 12.764 0.0 0.0 2.2225 0.0 0.0 393.2455622534373 0.0 393.2455622534373 0.0 12.675566008486744 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.2225 - 8 + 1 2.024 46585.3 1.0 3955 3471 7423 DOHH2_400M_050219_2,7428 DOHH2_400M_050219_2,7428, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7429 40.516 409.0 249110.0 25 0 51485.0 40839 VLNKAREN 8 110 472.2701932251518 942.5258335171036 2 472.2726928591728 MULTI CID FTMS 0 0 0 7423 178511.46875 0.5821877090255413 -7 0.6563568115234375 6 Unmodified _VLNKAREN_ ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6 8.593279151180031 0.7721714526254883 2 [{I|L}V]N 3 5 11.628 0.0 0.0 1.2338 0.0 0.0 0.0 613.3083707087629 613.3083707087629 0.3694274640881616 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 + [{I|L}V]N 1.2338 + + 57 1 2.024 87628.6 1.0 3956 3471 7423 DOHH2_400M_050219_2,7429 DOHH2_400M_050219_2,7429,VLNKAREN False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7430 40.53 800.0 123470.0 25 0 6021.2 + -1 SESAGGFYY 9 103 980.3998799534002 0 980.3976928591728 PEAK CID FTMS 0 0 0 7423 105789.1015625 1.0 0 0.0 7 nc|ENSG00000030066|Q12769|NUP160;nc|ENSG00000030066|Q12769-2|NUP160;ENST00000529863.1_1_11:47861610-47869870:-|nuORF;ENSG00000030066|ENST00000378460|NUP160 2 YY{M(Oxidation (M))|F}GSQ 6 -1 25.175 0.0 0.0 1.2852 0.0 0.0 997.4086984565746 213.0518282526 1210.4605267091747 0.0 0.0 0.0 0.0 0 0.0 0.0 1.774227503252014 0.0 YY{M(Oxidation (M))|F}GSQ 1.2852 - 2805 + 1 2.024 72010.4 0.5899999737739563 3957 3471 7423 DOHH2_400M_050219_2,7430 DOHH2_400M_050219_2,7430, False False SESAGGFYY 40.529836 980.397692859173 1028048.375 7423.0 nc|ENSG00000030066|Q12769|NUP160;;nc|ENSG00000030066|Q12769-2|NUP160;;ENST00000529863.1_1_11:47861610-47869870:-|nuORF;;ENSG00000030066|ENST00000378460|NUP160 8.323569615681967 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7432 40.535 63.0 926680.0 25 0 136630.0 + 13770 HSDPSILGY 9 66 494.7403502505754 987.4661475679508 2 494.7405273318291 MULTI CID FTMS 0 0 0 7431 866776.75 0.954184197001169 1 -0.0899505615234375 1 Unmodified _HSDPSILGY_ ENSG00000146830|ENST00000678049|GIGYF1 77.98433622928108 0.0180125044636492 2 [HS]D[PS]{I|L}{I|L}GY 9 0 + 67.457 0.0 0.0 6.8314 6.8314 87.235 0.0 0.0 0.0 3.748162098248997 48.249256301612746 3.748162098248997 7.257724967479859 0 1.3807196863200843 0.0 2.079689690656103 0.0 + + [HS]D[PS]{I|L}{I|L}GY;[HS]D{I|L}[PS]{I|L}GY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}GY;[HS]D{I|L}GV[TP]Y;[HS]D{I|L}GV{I|L}[{M(Oxidation (M))|F}T];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[RK]Y 6.8314;6.0964;5.6471;3.1978;2.2613;0.78303 +;-;-;-;-;- + 201 1 2.024 51172.1 1.0 3958 3472 7431 DOHH2_400M_050219_2,7432 DOHH2_400M_050219_2,7432,HSDPSILGY True True HSDPSILGY 40.534582 494.740527331829 28860795.0 7431.0 ENSG00000146830|ENST00000678049|GIGYF1 9.01447327931722 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7433 40.538 181.0 659980.0 25 0 163710.0 + 6952 EEIAIIPSKKL 11 91 414.25526659359736 1239.743970380992 3 414.2554199099541 MULTI CID FTMS 0 0 0 7431 301694.75 0.4882955032271541 3 -0.2819442749023437 2 Unmodified _EEIAIIPSKKL_ ENSG00000182774|ENST00000647841|RPS17;ENST00000559273.1_1_15:83208730-83209179:-|nuORF;ENST00000560639.1_1_15:83207600-83209179:-|nuORF 63.22749603027936 0.0560465731344335 2 [{I|L}A]QKD 5 8 34.181 0.0 0.0 2.7571 0.0 0.0 0.0 681.4307128949171 681.4307128949171 12.617391737842 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [{I|L}A]QKD 2.7571 - 206 1 2.024 102350.4 1.0 3959 3472 7431 DOHH2_400M_050219_2,7433 DOHH2_400M_050219_2,7433,EEIAIIPSKKL True True EEIAIIPSKKL 40.538088 414.255419909954 23055485.0 7431.0 ENSG00000182774|ENST00000647841|RPS17;;ENST00000560639.1_1_15:83207600-83209179:-|nuORF;;ENST00000559273.1_1_15:83208730-83209179:-|nuORF 7.445955912272136 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7434 40.542 186.0 542530.0 25 0 22911.0 -1 0 116 910.4217595233204 1818.8289661134409 2 910.4223510622978 MULTI CID FTMS 0 0 0 7431 449979.1875 0.174080712193264 -3 0.2103118896484375 3 2 [MN]PN{I|L}NADQ[NP]TAN{I|L}S 16 -1 90.589 0.0 0.0 4.9806 0.0 0.0 0.0 121.04124628238516 121.04124628238516 66.5090513895472 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.6139829889124311 1.1861818737241734 [MN]PN{I|L}NADQ[NP]TAN{I|L}S 4.9806 - 2620 + 1 2.024 68899.4 1.0 3960 3472 7431 DOHH2_400M_050219_2,7434 DOHH2_400M_050219_2,7434, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7435 40.546 241.0 284450.0 25 0 43568.0 + 39705 VEGPNTIG 8 96 393.70497884783134 0 393.7051269412041 PEAK CID FTMS 0 0 0 7431 123072.4453125 1.0 0 0.0 4 Unmodified _VEGPNTIG_ REV__ENSG00000116819|ENST00000373235|TFAP2E 4.75600775471527 0.5825752635465162 2 {M(Oxidation (M))|F}TK 3 -1 15.383 0.0 0.0 1.9587 0.0 0.0 228.1091021275002 178.05141626529533 406.1605183927956 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.7887254899964358 {M(Oxidation (M))|F}TK 1.9587 - 21 + 1 2.024 58416.4 1.0 3961 3472 7431 DOHH2_400M_050219_2,7435 DOHH2_400M_050219_2,7435,VEGPNTIG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7436 40.552 336.0 206980.0 25 0 10619.0 + 25413 NEASVLHNL 9 110 498.7590168387918 995.5034807443836 2 498.7592956423759 MULTI CID FTMS 0 0 0 7431 118508.7578125 0.613484854943474 -1 0.0544662475585937 5 Unmodified _NEASVLHNL_ ENSG00000078814|ENST00000262873|MYH7B;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000133026|ENST00000360416|MYH10;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000078814|A7E2Y1-2|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11 40.72490554402381 0.0714771638475563 2 {[QD]|[EN]|[WG]|[KD]|[RS]}ASV{I|L}HN{I|L} 9 0 + 42.813 0.0 0.0 4.3006 4.3006 83.261 0.0 0.0 0.0 14.005441764518718 11.62263811776812 11.62263811776812 14.762809413564636 0 1.0 0.0 0.0 0.555462187404089 + + {[QD]|[EN]|[WG]|[KD]|[RS]}ASV{I|L}HN{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}ASV{I|L}HGG{I|L} 4.3006;2.8177 +;- + 226 + 1 2.024 57513.5 1.0 3962 3472 7431 DOHH2_400M_050219_2,7436 DOHH2_400M_050219_2,7436,NEASVLHNL True True NEASVLHNL 40.552292 498.759295642376 2963299.0 7431.0 nc|ENSG00000078814|A7E2Y1-2|MYH7B;;ENSG00000100345|ENST00000216181|MYH9;;nc|ENSG00000133026|P35580-3|MYH10;;nc|ENSG00000133026|P35580-5|MYH10;;ENSG00000105357|ENST00000642316|MYH14;;ENSG00000078814|ENST00000262873|MYH7B;;nc|ENSG00000133392|P35749-4|MYH11;;nc|ENSG00000133026|P35580-2|MYH10;;nc|ENSG00000105357|Q7Z406-4|MYH14;;nc|ENSG00000105357|Q7Z406-5|MYH14;;nc|ENSG00000105357|Q7Z406-6|MYH14;;nc|ENSG00000133026|P35580|MYH10;;nc|ENSG00000133392|P35749-2|MYH11;;ENSG00000133026|ENST00000360416|MYH10;;nc|ENSG00000133392|P35749-3|MYH11;;nc|ENSG00000105357|Q7Z406|MYH14;;nc|ENSG00000078814|A7E2Y1|MYH7B;;ENSG00000133392|ENST00000300036|MYH11 7.260917186737059 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7437 40.566 800.0 235400.0 25 0 26820.0 + 45594 YVGPSLRM 8 157 461.7445033867082 0 461.7444335818291 PEAK CID FTMS 0 0 0 7431 104331.6484375 1.0 0 0.0 6 Unmodified _YVGPSLRM_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 46.020951573049366 0.1173232347498002 2 VGP[RD]V 6 4 23.817 0.0 0.0 2.5847 0.0 0.0 163.06355204608195 132.04583154849846 295.10938359458044 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3494850021680094 0.3807196863200844 VGP[RD]V 2.5847 - 77 + 1 2.024 145658.2 0.9700000286102296 3963 3472 7431 DOHH2_400M_050219_2,7437 DOHH2_400M_050219_2,7437,YVGPSLRM True True YVGPSLRM 40.566109 461.744433581829 781726.5 7431.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 4.060869614283244 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7438 40.571 266.0 184900.0 25 0 17488.0 + 894 AEWLLQSSR 9 84 545.2860392297839 1088.5575255263675 2 545.2858154177666 MULTI CID FTMS 0 0 0 7431 104384.9921875 0.2645330148365057 3 -0.2819442749023437 7 Unmodified _AEWLLQSSR_ REV__ENSG00000203485|ENST00000392634|INF2;REV__nc|ENSG00000203485|Q27J81-2|INF2 7.289230182591677 0.6602208344931196 2 [YV]MA 4 -1 40.445 0.0 0.0 3.7155 0.0 0.0 0.0 621.3280130749868 621.3280130749868 28.662575976154923 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [YV]MA 3.7155 - 86 + 1 2.024 41590.7 1.0 3964 3472 7431 DOHH2_400M_050219_2,7438 DOHH2_400M_050219_2,7438,AEWLLQSSR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7439 40.585 800.0 158320.0 25 0 49088.0 40524 VIVVKAPP 8 126 411.7746084717589 821.5346640103178 2 411.7745239138603 MULTI CID FTMS 0 0 0 7431 101470.296875 0.5272897945078904 -2 0.1187934875488281 8 Unmodified _VIVVKAPP_ ENSG00000112242|ENST00000346618|E2F3;nc|ENSG00000112242|O00716-2|E2F3 2.577480529830294 0.808687252328423 2 T 1 8 9.732 0.0 0.0 1.1846 0.0 0.0 410.2880342269178 307.1665459767535 717.4545802036713 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 T 1.1846 - 18 + 1 2.024 103526.5 0.7400000095367432 3965 3472 7431 DOHH2_400M_050219_2,7439 DOHH2_400M_050219_2,7439,VIVVKAPP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7440 40.599 800.0 134480.0 25 0 13326.0 -1 0 103 603.9673254404012 1808.880146921404 3 604.2948486208916 MULTI CID FTMS 0 0 0 7431 103798.34375 0.0539267677874638 12 -1.001628875732422 9 2 {I|L}Q 2 -1 25.573 0.0 0.0 1.4138 0.0 0.0 1549.726790181193 0.0 1549.726790181193 0.0 3.683859512463595 0.0 0.0 0 0.0 0.0 0.0 0.6989700043360187 {I|L}Q 1.4138 - 512 + 1 2.024 84411.3 0.550000011920929 3966 3472 7431 DOHH2_400M_050219_2,7440 DOHH2_400M_050219_2,7440, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7441 40.613 800.0 143120.0 25 0 11995.0 + + 36582 TALLKSLSA 9 145 452.2791630521812 902.5437731711625 2 452.2791931033134 MULTI CID FTMS 0 0 0 7431 92486.5234375 1.0 0 0.0 10 Unmodified _TALLPLLY_ ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000556791.1_1_14:102499420-102503925:+|nuORF 28.17323086031832 0.4514957916281387 2 [TA]{I|L}{I|L}A 5 -1 46.07 0.0 0.0 5.1045 0.0 0.0 0.0 430.23484216861567 430.23484216861567 14.460959125389074 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 [TA]{I|L}{I|L}A 5.1045 - 227 + 1 2.024 94372.4 0.4099999964237213 3967 3472 7431 DOHH2_400M_050219_2,7441 DOHH2_400M_050219_2,7441,TALLPLLY False False TALLKSLSA 40.612504 452.279193103313 732012.8125 7431.0 ENSG00000197102|ENST00000360184|DYNC1H1;;ENST00000556791.1_1_14:102499420-102503925:+|nuORF 4.156167984008789 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7442 40.62 317.0 371650.0 25 0 34703.0 + 31366 RNKLKYLAF 9 128 384.9010424420836 1151.6812979264507 3 384.9009277224541 MULTI CID FTMS 0 0 0 7431 79797.90625 0.4048195334354657 -2 0.1187934875488281 11 Unmodified _RNKLKYLAF_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000472481.5_1_19:49990877-49994169:+|nuORF 28.49450938151212 0.1686335738423394 2 [RN]K{I|L}KAY{I|L}{M(Oxidation (M))|F} 9 2 + 30.8 0.0 0.0 2.6743 2.6743 67.073 0.0 0.0 0.0 0.4575749056067515 23.810187889572425 0.4575749056067515 1.7609125905568137 0 0.4247425010840047 0.0 0.0 0.0 [RN]K{I|L}KAY{I|L}{M(Oxidation (M))|F};[RN]K{I|L}KA{I|L}Y{M(Oxidation (M))|F};[RN]K{I|L}KY{I|L}A{M(Oxidation (M))|F};[RN]K{I|L}KYA{I|L}{M(Oxidation (M))|F};[RN]KRRY{I|L}{M(Oxidation (M))|F};[RN]KRR{I|L}Y{M(Oxidation (M))|F};[RN]K{I|L}RRY{M(Oxidation (M))|F} 2.6743;2.5214;2.2867;2.0674;1.2679;1.115;0.59222 -;-;+;-;-;-;- + 116 1 2.024 96222.9 1.0 3968 3472 7431 DOHH2_400M_050219_2,7442 DOHH2_400M_050219_2,7442,RNKLKYLAF False True RNKLKYLAF 40.619744 384.900927722454 1487445.625 7431.0 ENST00000472481.5_1_19:49990877-49994169:+|nuORF;;ENSG00000142541|ENST00000391857|RPL13A 6.031460126241048 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7444 40.625 7.7 6738500.0 25 0 884580.0 + 12445 GTVYEDLRY 9 61 558.2720860411114 1114.529619149023 2 558.2726318240166 MULTI CID FTMS 0 0 0 7443 6288262.5 0.6018992632306303 2 -0.1919937133789062 1 Unmodified _GTVYEDLRY_ chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-2|UBE2C 43.77239144664712 0.0547478964384323 2 {[SA]|[TG]}VYED{I|L}RY 9 0 + 73.37 0.0 0.0 6.583 6.583 92.312 0.0 0.0 0.0 44.49600975727897 11.962724883926654 11.962724883926654 16.251837901751003 0 0.6549471895720985 1.3979400086720375 0.4247425010840047 0.0 + + {[SA]|[TG]}VYED{I|L}RY;{[SA]|[TG]}VYEDY[R{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE[R{M(Oxidation (M))|F}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.583;5.1249;1.7645 +;-;- + 73 + 1 2.025 50709.2 1.0 3969 3473 7443 DOHH2_400M_050219_2,7444 DOHH2_400M_050219_2,7444,GTVYEDLRY True True GTVYEDLRY 40.624533 558.272631824017 229290888.0 7443.0 ENSG00000175063|ENST00000356455|UBE2C;;nc|ENSG00000175063|O00762-2|UBE2C;;chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C 8.641199429829916 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7445 40.626 11.0 5917500.0 25 0 553530.0 + 35148 SRGDFVVEY 9 64 536.2588183568016 1070.5030837804031 2 536.2593871951103 MULTI CID FTMS 0 0 0 7443 4723870.5 0.6679964034110325 2 -0.1919937133789062 2 Unmodified _SRGDFVVEY_ ENSG00000183955|ENST00000402868|KMT5A;ENST00000437519.5_1_12:123868737-123892247:+|nuORF;nc|ENSG00000183955|Q9NQR1|KMT5A 24.99096001346401 0.2132109383330889 2 [YE][RN]VVEY 8 5 + 51.713 0.0 0.0 4.8307 4.8307 88.195 0.0 0.0 0.0 4.507046801327732 40.744171855527966 4.507046801327732 51.71327198560853 0 0.9247425010840048 0.0 0.3252574989159953 0.3807196863200844 [YE][RN]VVEY 4.8307 - 48 1 2.025 57709.6 1.0 3970 3473 7443 DOHH2_400M_050219_2,7445 DOHH2_400M_050219_2,7445,SRGDFVVEY False True SRGDFVVEY 40.625712 536.25938719511 212911904.0 7443.0 ENST00000437519.5_1_12:123868737-123892247:+|nuORF;;ENSG00000183955|ENST00000402868|KMT5A;;nc|ENSG00000183955|Q9NQR1|KMT5A 6.121735572814941 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7446 40.627 48.0 1301300.0 25 0 116920.0 + 4801 DENSVIKSF 9 93 519.7585016525774 1037.5024503719546 2 519.7589599490166 MULTI CID FTMS 0 0 0 7443 1208409.125 0.4576972253830283 3 -0.2821006774902344 3 Unmodified _DENSVIKSF_ ENSG00000130935|ENST00000253247|NOL11 59.36838082759317 0.0264317782606298 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NSV{I|L}KS{M(Oxidation (M))|F} 9 0 + 71.138 0.0 0.0 6.8567 6.8567 90.141 0.0 0.0 0.0 50.77623146104628 14.973024840566469 14.973024840566469 9.208187539523747 0 1.2302046884880935 0.0 0.5994850021680094 0.4247425010840047 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NSV{I|L}KS{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGSV{I|L}KS{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WP]{I|L}KS{M(Oxidation (M))|F} 6.8567;5.9691;2.8298 +;-;- + 148 + 1 2.025 54529.1 1.0 3971 3473 7443 DOHH2_400M_050219_2,7446 DOHH2_400M_050219_2,7446,DENSVIKSF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7447 40.63 166.0 398570.0 25 0 74896.0 -1 0 96 479.277350532607 478.270074066007 1 479.2774536013603 MULTI CID FTMS 0 0 0 7443 366031.34375 0.3715023190898668 -4 0.300262451171875 4 2 {I|L} 1 -1 9.6041 0.0 0.0 2.0081 0.0 0.0 347.1749793167867 0.0 347.1749793167867 0.0 7.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.0081 - 6 + 1 2.025 59002.3 1.0 3972 3473 7443 DOHH2_400M_050219_2,7447 DOHH2_400M_050219_2,7447, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7448 40.633 120.0 504610.0 25 0 46117.0 + 16724 KEWETIRSF 9 81 598.3079737548258 1194.6013945764514 2 598.3091308474541 MULTI CID FTMS 0 0 0 7443 283954.375 1.0 0 0.0 5 Unmodified _KEWETIRSF_ ENSG00000149313|ENST00000278618|AASDHPPT 42.312485326615175 0.0627620958981271 2 KEWET{I|L}R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 9 0 + 60.411 0.0 0.0 5.057 5.057 83.843 0.0 0.0 0.0 39.371987629411294 2.147642715192504 2.147642715192504 9.208187539523747 0 0.7742275032520141 0.0 0.805462187404089 0.0 + + KEWET{I|L}R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};KE{[DA]|[EG]}ET{I|L}R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[H{I|L}]{[SA]|[TG]}{I|L}T[C(Carbamidomethyl (C))H]EK;K{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H]T{I|L}R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 5.057;4.2862;2.669;2.3732 +;-;-;- + 93 + 1 2.025 51173.7 1.0 3973 3473 7443 DOHH2_400M_050219_2,7448 DOHH2_400M_050219_2,7448,KEWETIRSF True True KEWETIRSF 40.632746 598.309130847454 2425285.5 7443.0 ENSG00000149313|ENST00000278618|AASDHPPT 5.61512565612793 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7449 40.636 152.0 327220.0 25 0 30860.0 + 38584 TTDFPGNYSGY 11 83 611.2563810020872 1220.4982090709743 2 611.2567626833916 MULTI CID FTMS 0 0 0 7443 252957.421875 0.2125796900961423 12 -0.9765548706054688 6 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 43.77239144664712 0.1542841003880809 2 {[ET]|[MV]}[Y{M(Oxidation (M))|F}][QA]RSGY 10 6 {[ET]|[MV]}[Y{M(Oxidation (M))|F}][QA]R + + 24.609 -9.6926 -1.0825 2.0163 2.0163 47.498 0.0 0.0 0.0 0.0 0.9499766998215976 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[ET]|[MV]}[Y{M(Oxidation (M))|F}][QA]RSGY 2.0163 - 127 + 1 2.025 40847.3 1.0 3974 3473 7443 DOHH2_400M_050219_2,7449 DOHH2_400M_050219_2,7449,TTDFPGNYSGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7450 40.64 233.0 377830.0 25 0 41481.0 + 44134 YLDNVIGHSY 10 105 590.784389236535 1179.55422553987 2 590.7846557497978 MULTI CID FTMS 0 0 0 7443 186375.28125 0.8138643021151434 1 -0.1044273376464843 7 Unmodified _YLDNVIGHSY_ ENSG00000089195|ENST00000203001|TRMT6;ENST00000473131.5_1_20:5924535-5931132:-|nuORF;nc|ENSG00000089195|Q9UJA5-2|TRMT6;nc|ENSG00000089195|Q9UJA5-3|TRMT6 55.24861242081279 0.0493457817857391 2 Y{I|L}DNV{I|L}GHSY 10 0 + 100.7 0.0 0.0 8.537 8.537 91.969 0.0 0.0 0.0 35.02697515943353 10.647253296366545 10.647253296366545 9.164539485499247 0 0.8494850021680094 2.0 1.4559771852360797 0.0 + + Y{I|L}DNV{I|L}GHSY;Y{I|L}DGGV{I|L}GHSY;Y{I|L}DNV{I|L}G[NS]W;Y{I|L}DGGV{I|L}G[NS]W;Y{I|L}DNV{I|L}[MT][DP];Y{I|L}DN[R{I|L}]HSY;Y{I|L}DSPY{I|L}{M(Oxidation (M))|F}Y;Y{I|L}DGGV{I|L}[MT][DP];Y{I|L}DGG[R{I|L}]HSY;Y{I|L}DN[R{I|L}][NS]W 8.537;7.76;7.6343;6.8574;6.0536;6.0503;5.9589;5.2767;5.2696;5.1476 +;-;-;-;-;-;-;-;-;- + 848 + 1 2.025 72511.4 1.0 3975 3473 7443 DOHH2_400M_050219_2,7450 DOHH2_400M_050219_2,7450,YLDNVIGHSY True True YLDNVIGHSY 40.640166 590.784655749798 1812731.375 7443.0 ENSG00000089195|ENST00000203001|TRMT6;;nc|ENSG00000089195|Q9UJA5-3|TRMT6;;nc|ENSG00000089195|Q9UJA5-2|TRMT6;;ENST00000473131.5_1_20:5924535-5931132:-|nuORF 9.166711489359535 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7451 40.645 253.0 301440.0 25 0 24224.0 + 35374 STDWHVVNY 9 117 560.7562775415855 1119.498002149971 2 560.7564575076103 MULTI CID FTMS 0 0 0 7443 175478.234375 0.2360553875815766 3 -0.2821006774902344 8 Unmodified _STDWHVVNY_ ENSG00000147251|ENST00000276202|DOCK11 46.020951573049366 0.0490941689151868 2 [WH]D{[MG]|[TS]}VVNY 9 4 + 48.112 0.0 0.0 4.2976 4.2976 76.442 0.0 0.0 0.0 14.47117211497865 35.347857426846296 14.47117211497865 6.025684359364405 0 0.805462187404089 1.154901959985743 0.5866968715561641 0.0 [WH]D{[MG]|[TS]}VVNY;[WH]D{[MG]|[TS]}VNVY;[WH]DV{[MG]|[TS]}VNY;[WH]D{[WT]|[RM]}VNY;[WH]D{[MG]|[TS]}VVGGY;[WH]VD{[MG]|[TS]}VNY;[WH]DV{[MG]|[TS]}NVY;[WH]VHHQNY;[WH]DVV{[MG]|[TS]}NY;[WH]D{[WT]|[RM]}NVY 4.2976;3.7594;3.6379;3.4854;3.4751;3.1001;3.0997;3.0991;3.0785;2.9472 -;-;-;-;-;-;-;-;-;- 1074 1 2.025 63085.1 1.0 3976 3473 7443 DOHH2_400M_050219_2,7451 DOHH2_400M_050219_2,7451,STDWHVVNY True True STDWHVVNY 40.644889 560.75645750761 10071872.0 7443.0 ENSG00000147251|ENST00000276202|DOCK11 7.946613311767578 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7452 40.659 800.0 260450.0 25 0 17703.0 + + -1 FSALTPDETYVPK 13 158 734.3725094278982 1466.7304659225963 2 734.3738281130791 MULTI CID FTMS 0 0 0 7443 128781.2265625 0.3891204554173726 -1 0.0899505615234375 9 Carbamidomethyl (C) _FSEKLRC(Carbamidomethyl (C))RDEK_ P02769 15.248480904072842 0.7179608125786238 2 {[WT]|[RM]}T{I|L}[WY]PT{I|L}ASE 12 -1 + 92.872 0.0 0.0 6.3319 6.3319 80.203 0.0 0.0 0.0 0.6534553274869523 44.916440611282624 0.6534553274869523 2.5044398833870503 0 1.610924374808178 0.0 1.4361818737241734 0.3807196863200844 {[WT]|[RM]}T{I|L}[WY]PT{I|L}ASE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG]{I|L}[WY]PT{I|L}ASE;[{I|L}A]CT{I|L}[{M(Oxidation (M))|F}E]{[VA]|[{I|L}G]}T{I|L}ASE;{M(Oxidation (M))|F}SA{I|L}TPDETYVPK;[{I|L}A]TC{I|L}[{M(Oxidation (M))|F}E]{[VA]|[{I|L}G]}T{I|L}ASE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[VP][WY]PT{I|L}ASE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AT[NG]VT{[VA]|[{I|L}G]}T{I|L}ASE;{M(Oxidation (M))|F}SA{I|L}TPDTEYVPK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AT[NG]E[K{I|L}]T{I|L}ASE;{[WT]|[RM]}T{[C(Carbamidomethyl (C))G]|[NC]}T[K{I|L}]T{I|L}ASE 6.3319;6.1612;6.0579;6.0102;5.8344;5.829;5.7824;5.7701;5.7284;5.651 -;-;-;-;-;-;-;-;-;- 13465 1 2.025 144840.0 0.6800000071525574 3977 3473 7443 DOHH2_400M_050219_2,7452 DOHH2_400M_050219_2,7452,FSEKLRCRDEK False False FSALTPDETYVPK 40.658737 734.373828113079 4986814.0 7443.0 P02769 9.270923137664797 2.0 False 13.0 True unknown PXD020620_cell_line DOHH2_400M_050219_2 7453 40.67 629.0 198620.0 25 0 21712.0 + 12871 GVVRPPPLSP 10 153 509.8042835690469 0 509.8042785525322 PEAK CID FTMS 0 0 0 7443 126056.5390625 0.8975199665360967 -2 0.1444168090820312 10 Unmodified _GVVRPPPLSP_ REV__ENSG00000225614|ENST00000565624|ZNF469 6.723162845929126 0.3961065659209837 2 T 1 -1 5.4846 0.0 0.0 0.53897 0.0 0.0 347.1512174293062 566.3666475885374 913.5178650178436 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.53897 - 27 + 1 2.025 96960.7 1.0 3978 3473 7443 DOHH2_400M_050219_2,7453 DOHH2_400M_050219_2,7453,GVVRPPPLSP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7454 40.679 549.0 304620.0 25 0 32216.0 + 7407 EGKPRILSL 9 131 506.81197432885983 1011.6093957245196 2 506.8111450076103 MULTI CID FTMS 0 0 0 7443 130977.2109375 0.5131566720015515 -1 0.0899505615234375 11 Unmodified _EGKPRILSL_ ENSG00000150347|ENST00000279873|ARID5B;nc|ENSG00000150347|Q14865-3|ARID5B 67.83816525789305 0.0219346420158844 2 {I|L}{I|L}[RP]SN{I|L}S{I|L} 9 5 + 40.472 0.0 0.0 4.0007 4.0007 73.367 0.0 0.0 0.0 5.518338989248264 18.49151998491174 5.518338989248264 3.979400086720368 0 0.8807196863200843 1.154901959985743 1.3494850021680094 0.0 {I|L}{I|L}[RP]SN{I|L}S{I|L};{I|L}{I|L}[KP]DN{I|L}S{I|L};{I|L}{I|L}[RP]S{I|L}NS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[HV]{I|L}{I|L}S{I|L};{I|L}{I|L}[KP]D{I|L}NS{I|L};{I|L}{I|L}[RP]SGG{I|L}S{I|L};[RP]{I|L}{I|L}SN{I|L}S{I|L};{I|L}{I|L}[KP]DGG{I|L}S{I|L};{I|L}{I|L}[RP]S{I|L}GGS{I|L};[RP]{I|L}{I|L}S{I|L}NS{I|L} 4.0007;3.6074;3.4851;3.2841;3.0917;3.0905;2.8244;2.6971;2.5748;2.3087 -;-;-;-;-;-;-;-;-;- 394 1 2.025 131483.7 1.0 3979 3473 7443 DOHH2_400M_050219_2,7454 DOHH2_400M_050219_2,7454,EGKPRILSL True True EGKPRILSL 40.679354 506.81114500761 1817554.625 7443.0 ENSG00000150347|ENST00000279873|ARID5B;;nc|ENSG00000150347|Q14865-3|ARID5B 4.328347682952881 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7455 40.693 800.0 185540.0 25 0 11583.0 + 6954 EEIAIIPSKKL 11 155 620.8792078984225 1239.7438628636448 2 620.8798095583916 MULTI CID FTMS 0 0 0 7443 122567.3203125 0.1992645815598196 4 -0.3810882568359375 12 Unmodified _EEIAIIPSKKL_ ENSG00000182774|ENST00000647841|RPS17;ENST00000559273.1_1_15:83208730-83209179:-|nuORF;ENST00000560639.1_1_15:83207600-83209179:-|nuORF 88.36371040165146 0.0014365852967226 2 EE{I|L}A{I|L}{I|L}PSKK{I|L} 11 0 + 76.552 0.0 0.0 6.1748 6.1748 93.72 0.0 0.0 0.0 54.7266690622825 12.210635766988986 12.210635766988986 76.55178905871597 0 1.7302046884880935 1.3979400086720375 1.1861818737241734 0.0 + + EE{I|L}A{I|L}{I|L}PSKK{I|L} 6.1748 + + 732 + 1 2.025 113184.5 0.6399999856948853 3980 3473 7443 DOHH2_400M_050219_2,7455 DOHH2_400M_050219_2,7455,EEIAIIPSKKL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7456 40.701 380.0 137030.0 25 0 6156.9 -1 IFLTDMIIYQ 10 105 636.8332366460467 1271.6519203588932 2 637.3366577029228 MULTI CID FTMS 0 0 0 7443 118899.84375 1.0 0 0.0 13 Oxidation (M) _IFLTDM(Oxidation (M))IIYQ_ ENSG00000104613|ENST00000397977|INTS10 18.1463463914782 0.5430639438673815 2 [AG]Y[KT]DT{I|L}{I|L}QY 11 -1 + 50.632 0.0 0.0 3.9816 3.9816 77.884 0.0 0.0 0.0 12.958494831602003 16.575773191777934 12.958494831602003 8.812281309285623 0 0.8494850021680094 2.0 0.2742275032520141 0.2614393726401688 [AG]Y[KT]DT{I|L}{I|L}QY;[AG]Y[KT]{[ET]|[MV]}V{I|L}QY;[AG]Y[KT]DT{I|L}{I|L}[AG]Y;[YQ][KT]DT{I|L}{I|L}QY;[HS]D[R{I|L}]Q{I|L}{I|L}QY;[H{I|L}][RN]DT{I|L}{I|L}QY;[YQ][KT]{[ET]|[MV]}V{I|L}QY;[YQ][KT]DT{I|L}{I|L}[AG]Y;[HS]D[R{I|L}]AAV{I|L}QY;[HS]D[R{I|L}][AG]{I|L}{I|L}QY 3.9816;3.2887;3.2638;2.9626;2.5243;2.4892;2.2696;2.2419;1.9421;1.8037 -;-;-;-;-;-;-;-;-;- 369 1 2.025 46023.5 1.0 3981 3473 7443 DOHH2_400M_050219_2,7456 DOHH2_400M_050219_2,7456,IFLTDMIIYQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7457 40.715 800.0 152300.0 25 0 9289.6 + 26913 PDPLEGGDKTW 11 154 607.7877086235569 1213.5608643139135 2 607.7893554568291 MULTI CID FTMS 0 0 0 7443 113545.34375 0.3573610182767521 3 -0.2821006774902344 14 Unmodified _PDPLEGGDKTW_ REV__ENSG00000175161|ENST00000383699|CADM2;REV__nc|ENSG00000175161|Q8N3J6-3|CADM2;REV__nc|ENSG00000175161|Q8N3J6-4|CADM2;REV__nc|ENSG00000175161|Q8N3J6-5|CADM2;REV__nc|ENSG00000175161|Q8N3J6|CADM2 17.11289562659939 0.6791789249425932 2 {[ET]|[MV]}[{I|L}P]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}QY 10 -1 + 23.126 0.0 0.0 1.9057 1.9057 70.348 0.0 0.0 0.0 0.7918124604762475 10.119974565770033 0.7918124604762475 5.300084529637985 0 0.3807196863200844 0.0 0.2742275032520141 0.8494850021680094 {[ET]|[MV]}[{I|L}P]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}QY;{[ET]|[MV]}[{I|L}P]{M(Oxidation (M))|F}[WM]QY;{[ET]|[MV]}[{I|L}P]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}YQ;{[QN]|[E{I|L}]|[KN]}N[WK]C[{I|L}P][DP];{[ET]|[MV]}[{I|L}P]{M(Oxidation (M))|F}[WM]YQ;WW[HN]AP{I|L}QY;WW[KS]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}QY 1.9057;1.4689;1.0413;0.6817;0.60459;0.5906;0.54339 -;-;-;-;-;-;- 552 + 1 2.025 91513.1 0.6100000143051147 3982 3473 7443 DOHH2_400M_050219_2,7457 DOHH2_400M_050219_2,7457,PDPLEGGDKTW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7458 40.72 294.0 254390.0 25 0 23388.0 -1 0 124 379.24825751772926 756.4819621022585 2 379.2483398318291 MULTI CID FTMS 0 0 0 7443 105712.2578125 1.0 0 0.0 15 2 P 1 -1 12.764 0.0 0.0 1.6873 0.0 0.0 641.4180258003039 0.0 641.4180258003039 0.0 2.4866232040397485 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.6873 - 24 + 1 2.025 63826.3 1.0 3983 3473 7443 DOHH2_400M_050219_2,7458 DOHH2_400M_050219_2,7458, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7459 40.724 195.0 244020.0 25 0 40475.0 42970 VVTATQRR 8 74 465.7772019834701 0 465.7777282595634 PEAK CID FTMS 0 0 0 7443 171777.78125 0.5865849151899749 12 -0.9765548706054688 16 Unmodified _VVTATQRR_ ENST00000435805.6_1_10:43047711-43048011:-|nuORF 2.302733041254933 0.5920993303473642 2 {I|L} 1 8 6.9897 0.0 0.0 0.75195 0.0 0.0 464.2801597269026 349.15244470767817 813.4326044345808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.75195 - 7 + 1 2.025 41173.5 1.0 3984 3473 7443 DOHH2_400M_050219_2,7459 DOHH2_400M_050219_2,7459,VVTATQRR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7461 40.733 324.0 333840.0 25 0 40129.0 + 1359 ALAAALAY 8 154 382.2200932415714 762.4256335499429 2 382.2197448611259 MULTI CID FTMS 0 0 0 7460 214381.4375 0.1196509019418793 5 -0.4944267272949219 1 Unmodified _ALAAALAY_ REV__ENSG00000142661|ENST00000374434|MYOM3;REV__ENST00000475306.1_1_1:24410803-24434643:-|nuORF;REV__nc|ENSG00000142661|Q5VTT5-2|MYOM3 0.7936320650641473 0.8195151834710337 2 {I|L} 1 -1 8.4949 0.0 0.0 1.1142 0.0 0.0 631.3309660468163 0.0 631.3309660468163 0.0 0.3594100365306261 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1142 + + 16 + 1 2.025 87068.4 1.0 3985 3474 7460 DOHH2_400M_050219_2,7461 DOHH2_400M_050219_2,7461,ALAAALAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7462 40.735 124.0 588840.0 25 0 72551.0 + 33134 SEVDLTRSF 9 88 527.2640445742322 1052.5135362152644 2 527.2649413943291 MULTI CID FTMS 0 0 0 7460 424312.3125 0.2056737565017959 -2 0.1943778991699218 2 Unmodified _SEVDLTRSF_ ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2 43.9818466556824 0.0535980856389242 2 {[ES]|[DT]|[{I|L}C]}VD{I|L}TRS{M(Oxidation (M))|F} 9 0 + 62.4 0.0 0.0 5.9286 5.9286 79.117 0.0 0.0 0.0 7.147642715192504 2.7620641193894926 2.7620641193894926 2.7620641193894926 0 1.805462187404089 0.0 0.3252574989159953 0.0 + + {[ES]|[DT]|[{I|L}C]}VD{I|L}TRS{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}VD{I|L}TRAY;{[ES]|[DT]|[{I|L}C]}VD{I|L}T[VG]S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}VD{I|L}T[VG]AY;{[ES]|[DT]|[{I|L}C]}VG{[NV]|[RG]}[KS]S{M(Oxidation (M))|F};{[SA]|[TG]}[H{I|L}]T{I|L}GS[HM];{[ES]|[DT]|[{I|L}C]}VG{[NV]|[RG]}[KS]AY;{[TV]|[{I|L}S]}[HA]T{I|L}GS[HM];{[ES]|[DT]|[{I|L}C]}VD[KP][NP][PA];{[ES]|[DT]|[{I|L}C]}V[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{M(Oxidation (M))|F} 5.9286;5.6662;5.0538;4.7913;2.4154;2.3796;2.153;1.986;1.8683;1.8383 +;-;-;-;-;-;-;-;-;- + 364 + 1 2.025 62221.9 1.0 3986 3474 7460 DOHH2_400M_050219_2,7462 DOHH2_400M_050219_2,7462,SEVDLTRSF True True SEVDLTRSF 40.735162 527.264941394329 30816363.0 7460.0 nc|ENSG00000100938|Q9P2T1-2|GMPR2;;ENSG00000100938|ENST00000399440|GMPR2;;nc|ENSG00000100938|Q9P2T1-3|GMPR2 5.147068977355957 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7463 40.738 114.0 584040.0 25 0 98412.0 + 13512 HMPITLIS 8 86 456.2565331763432 910.4985134194864 2 456.2566100955009 MULTI CID FTMS 0 0 0 7460 358703.125 0.6189397449203642 -3 0.2488441467285156 3 Unmodified _HMPITLIS_ REV__ENSG00000197181|ENST00000356766|PIWIL2;REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2 2.889219685676258 0.8067950007271085 2 {I|L} 1 -1 9.0908 0.0 0.0 0.99844 0.0 0.0 779.4036628108911 0.0 779.4036628108911 0.0 -0.830742997091269 -0.830742997091269 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.99844 + + 13 + 1 2.025 56192.6 1.0 3987 3474 7460 DOHH2_400M_050219_2,7463 DOHH2_400M_050219_2,7463,HMPITLIS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7464 40.743 317.0 382330.0 25 0 28738.0 -1 0 108 632.9766507264328 1895.9081227794984 3 633.3116332888603 MULTI CID FTMS 0 0 0 7460 232180.375 1.0 0 0.0 4 2 [DP]ETYVT 7 -1 39.293 0.0 0.0 2.0725 0.0 0.0 0.0 1087.5373701762358 1087.5373701762358 12.984097769176724 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.2416440611282626 0.0 [DP]ETYVT 2.0725 - 852 1 2.025 91668.4 1.0 3988 3474 7460 DOHH2_400M_050219_2,7464 DOHH2_400M_050219_2,7464, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7465 40.746 148.0 339210.0 25 0 53727.0 33465 SIFVPLWL 8 82 487.79067362394665 973.5667943146932 2 487.7915832400322 MULTI CID FTMS 0 0 0 7460 227792.53125 0.4697316778598051 -3 0.2488441467285156 5 Unmodified _SIFVPLWL_ ENSG00000226479|ENST00000426077|TMEM185B 2.577480529830294 0.808687252328423 2 {I|L} 1 7 11.259 0.0 0.0 1.1565 0.0 0.0 842.471943706098 0.0 842.471943706098 0.0 9.665266051846936 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1565 + + 8 + 1 2.025 44744.7 1.0 3989 3474 7460 DOHH2_400M_050219_2,7465 DOHH2_400M_050219_2,7465,SIFVPLWL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7466 40.757 584.0 246710.0 25 0 21247.0 + 33101 SESLFVSNHAY 11 152 627.2932662373169 1252.5719795414336 2 627.2939330935478 MULTI CID FTMS 0 0 0 7460 124942.8359375 0.9476456999331484 -1 0.1044273376464843 6 Unmodified _SESLFVSNHAY_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 65.47368725323818 0.0469305343733202 2 {[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSN[HA]Y 11 0 + 49.542 0.0 0.0 3.9552 3.9552 72.325 0.0 0.0 0.0 33.37125426772721 3.015935807182025 3.015935807182025 3.273589343863307 0 0.9247425010840048 0.0 0.2396518287104437 0.75 + + {[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSN[HA]Y;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSN{[QG]|[NA]}W;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSN{[QD]|[EN]|[WG]|[KD]|[RS]}Q;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSGG{[QG]|[NA]}W;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VS[DP]SW;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}[YQ]{[HG]|PP}W;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSGG{[QD]|[EN]|[WG]|[KD]|[RS]}Q;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}VSGG[HA]Y;{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}[YQ][PA][DP];{[ES]|[DT]|[{I|L}C]}S{I|L}{M(Oxidation (M))|F}DD[RV]W 3.9552;3.6939;3.4242;2.9651;2.7774;2.7073;2.6955;2.6277;2.5785;2.3371 +;-;-;-;-;-;-;-;-;- + 1833 + 1 2.025 110287.9 1.0 3990 3474 7460 DOHH2_400M_050219_2,7466 DOHH2_400M_050219_2,7466,SESLFVSNHAY True True SESLFVSNHAY 40.756516 627.293933093548 1043391.0625 7460.0 nc|ENSG00000149925|P04075|ALDOA;;ENSG00000149925|ENST00000642816|ALDOA 7.685475349426269 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7467 40.767 602.0 349620.0 25 0 22342.0 + 11656 GLDDKLLHY 9 212 358.5256851113862 1072.5552259343588 3 358.5256225466728 MULTI CID FTMS 0 0 0 7460 117847.8203125 0.9442554830215782 -1 0.1044273376464843 7 Unmodified _GLDDKLLHY_ ENSG00000156384|ENST00000369727|SFR1;nc|ENSG00000156384|Q86XK3-2|SFR1;nc|ENSG00000156384|Q86XK3-3|SFR1 24.99096001346401 0.2132109383330889 2 {[VA]|[{I|L}G]}DDK{I|L}{I|L}HY 9 0 + 68.594 0.0 0.0 6.3954 6.3954 91.478 0.0 0.0 0.0 29.616164500129663 13.372505457509972 13.372505457509972 15.740312677277188 0 0.2742275032520141 2.0 0.0 0.4247425010840047 + + {[VA]|[{I|L}G]}DDK{I|L}{I|L}HY;{[VA]|[{I|L}G]}DDK{I|L}{[WN]|[YH]}{I|L};{[VA]|[{I|L}G]}DDK{[WN]|[YH]}{I|L}{I|L} 6.3954;4.9278;3.6582 +;-;- + 243 + 1 2.025 167227.0 1.0 3991 3474 7460 DOHH2_400M_050219_2,7467 DOHH2_400M_050219_2,7467,GLDDKLLHY False True GLDDKLLHY 40.767039 358.525622546673 972839.875 7460.0 ENSG00000156384|ENST00000369727|SFR1;;nc|ENSG00000156384|Q86XK3-3|SFR1;;nc|ENSG00000156384|Q86XK3-2|SFR1 5.399908383687337 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7468 40.78 730.0 247030.0 25 0 49581.0 13303 HKAPSART 8 166 434.2421425517554 866.4697321703109 2 434.2417480349541 MULTI CID FTMS 0 0 0 7460 97841.4140625 0.3066108333060762 -4 0.31317138671875 8 Unmodified _HKAPSART_ ENSG00000131773|ENST00000355849|KHDRBS3 5.230669730166228 0.792582437072536 2 Y 1 8 9.3971 0.0 0.0 1.0845 0.0 0.0 685.3955572208953 0.0 685.3955572208953 0.0 0.5236767526000641 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0845 - 38 + 1 2.025 142252.3 1.0 3992 3474 7460 DOHH2_400M_050219_2,7468 DOHH2_400M_050219_2,7468,HKAPSART False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7469 40.785 278.0 252380.0 25 0 14416.0 -1 0 94 917.4294408659848 1832.8443287987693 2 918.4235107302666 MULTI CID FTMS 0 0 0 7460 217381.828125 0.3285857971691683 -2 0.1943778991699218 9 2 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[NP]{I|L}NDAQ[HV]{M(Oxidation (M))|F}N{I|L} 14 -1 42.558 0.0 0.0 2.322 0.0 0.0 0.0 208.07282434635 208.07282434635 28.803425879790083 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6421590589602533 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[NP]{I|L}NDAQ[HV]{M(Oxidation (M))|F}N{I|L} 2.322 - 1217 + 1 2.025 48775.8 1.0 3993 3474 7460 DOHH2_400M_050219_2,7469 DOHH2_400M_050219_2,7469, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7470 40.799 800.0 401570.0 25 0 75745.0 + + 19163 GEHGDSSVPVW 11 178 584.8615533631665 1167.708553793133 2 584.8616210818291 MULTI CID FTMS 0 0 0 7460 135781.28125 0.801155618312219 -1 0.1044273376464843 10 Unmodified _LEDLLLVILGA_ ENST00000394996.2_1_10:120692379-120692769:-|nuORF;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-3|LDHA;ENSG00000166800|ENST00000280706|LDHAL6A;ENSG00000171989|ENST00000307144|LDHAL6B;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-5|LDHA;ENSG00000134333|ENST00000422447|LDHA;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 21.53697664764585 0.586507868110548 2 [VP]QKM 5 -1 26.198 0.0 0.0 2.2435 0.0 0.0 0.0 581.3658163265892 581.3658163265892 0.2012718026662696 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [VP]QKM 2.2435 - 1758 1 2.025 238676.3 0.6399999856948853 3994 3474 7460 DOHH2_400M_050219_2,7470 DOHH2_400M_050219_2,7470,LEDLLLVILGA False False GEHGDSSVPVW 40.798678 584.861621081829 1660846.25 7460.0 ENST00000394996.2_1_10:120692379-120692769:-|nuORF;;nc|ENSG00000134333|P00338-4|LDHA;;nc|ENSG00000134333|P00338-3|LDHA;;ENSG00000166800|ENST00000280706|LDHAL6A;;ENSG00000171989|ENST00000307144|LDHAL6B;;nc|ENSG00000134333|P00338-2|LDHA;;nc|ENSG00000134333|P00338-5|LDHA;;ENSG00000134333|ENST00000422447|LDHA;;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 5.794592062632243 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7471 40.812 666.0 183270.0 25 0 18714.0 -1 0 153 504.2590563765316 503.2517799099316 1 504.2609741091728 MULTI CID FTMS 0 0 0 7460 92541.328125 1.0 0 0.0 11 2 {[QN]|[E{I|L}]|[KN]}GW 4 -1 + 25.406 0.0 0.0 5.0484 5.0484 81.71 0.0 0.0 0.0 8.23908740944319 12.218487496163563 8.23908740944319 8.23908740944319 0 0.0 0.9208187539523752 0.0 0.0 {[QN]|[E{I|L}]|[KN]}GW;{NN|[MP]|[D{I|L}]|[EV]}AW;{[CP]|[EA]}VW 5.0484;3.4112;2.4279 -;-;- 53 1 2.025 95757.7 1.0 3995 3474 7460 DOHH2_400M_050219_2,7471 DOHH2_400M_050219_2,7471, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7473 40.817 20.0 2654900.0 25 0 545700.0 + 42857 VVLGPPAA 8 67 362.2222620001882 722.4299710671764 2 362.2221862673759 MULTI CID FTMS 0 0 0 7472 2859062.5 0.7121257304095138 1 -0.0901069641113281 1 Unmodified _VVLGPPAA_ REV__ENST00000468758.1_1_2:134877558-135010718:+|nuORF;REV__ENST00000481801.5_1_2:134877633-135011843:+|nuORF 0.0 0.8243325171867699 2 K 1 -1 6.9897 0.0 0.0 0.96753 0.0 0.0 200.22594382283893 391.0876864068969 591.3136302297358 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.96753 - 1 + 1 2.025 51549.9 1.0 3996 3475 7472 DOHH2_400M_050219_2,7473 DOHH2_400M_050219_2,7473,VVLGPPAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7474 40.818 23.0 2401700.0 25 0 128230.0 -1 0 66 910.4217595233204 1818.8289661134409 2 910.9246703982352 MULTI CID FTMS 0 0 0 7472 2675626.75 0.9852600044445992 1 -0.0901069641113281 2 2 [MN]PN{I|L}NA[YG]{[MG]|[TS]}{M(Oxidation (M))|F}AN{I|L} 15 -1 69.166 0.0 0.0 3.8028 0.0 0.0 0.0 208.07326685123283 208.07326685123283 43.460696996448576 0.0 0.0 0.0 0 0.6307196863200843 1.5228787452803376 0.0 0.3807196863200844 [MN]PN{I|L}NA[YG]{[MG]|[TS]}{M(Oxidation (M))|F}AN{I|L} 3.8028 - 699 + 1 2.025 43980.3 1.0 3997 3475 7472 DOHH2_400M_050219_2,7474 DOHH2_400M_050219_2,7474, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7475 40.819 32.0 1789800.0 25 0 440450.0 + 37683 TLNEKLTAL 9 77 501.7947483099927 1001.5749436867852 2 501.7949401736259 MULTI CID FTMS 0 0 0 7472 1650649.0 0.3914228162184997 -1 0.0875663757324218 3 Unmodified _TLNEKLTAL_ ENSG00000254999|ENST00000530758|BRK1;nc|ENSG00000254999|Q8WUW1-2|BRK1 57.24910588100465 0.0276051374632116 2 [{I|L}T]NRTA{I|L} 7 3 68.492 0.0 0.0 6.8385 0.0 0.0 0.0 229.11991289775224 229.11991289775224 47.03865411098249 0.0 0.0 0.0 0 0.8807196863200843 2.0 1.1989700043360187 0.3494850021680094 [{I|L}T]NRTA{I|L} 6.8385 - 804 1 2.025 49286.9 1.0 3998 3475 7472 DOHH2_400M_050219_2,7475 DOHH2_400M_050219_2,7475,TLNEKLTAL True True TLNEKLTAL 40.818896 501.794940173626 63872676.0 7472.0 ENSG00000254999|ENST00000530758|BRK1;;nc|ENSG00000254999|Q8WUW1-2|BRK1 6.25394868850708 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7476 40.822 146.0 498810.0 25 0 62071.0 20709 LLSAAKVM 8 90 416.7514525961503 831.4883522591006 2 416.7515441775322 MULTI CID FTMS 0 0 0 7472 446989.375 0.7165934709288292 1 -0.0901069641113281 4 Unmodified _LLSAAKVM_ ENSG00000134780|ENST00000257215|DAGLA 18.13498045792455 0.6430038125133779 2 {[TV]|[{I|L}S]}AAK{I|L}VM 8 2 + 41.502 0.0 0.0 4.9913 4.9913 85.146 0.0 0.0 0.0 0.6694678963061307 24.51268265186993 0.6694678963061307 10.85415499922145 0 0.8935078169319297 0.0 1.5356668758921828 0.0 {[TV]|[{I|L}S]}AAK{I|L}VM;{[TV]|[{I|L}S]}AA{I|L}KVM;{[TV]|[{I|L}S]}A{I|L}AKVM;[K{I|L}][QT]{I|L}VM;[{I|L}V][TA]AKVM;[K{I|L}][DV]KVM 4.9913;3.6859;2.4511;2.3444;1.3526;1.039 -;-;-;-;-;- 129 1 2.025 66634.0 1.0 3999 3475 7472 DOHH2_400M_050219_2,7476 DOHH2_400M_050219_2,7476,LLSAAKVM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7477 40.825 175.0 472870.0 25 0 57301.0 + 13771 HSDPSILGY 9 112 494.7403502505754 987.4661475679508 2 494.7405883669853 MULTI CID FTMS 0 0 0 7472 299308.3125 0.3294911426945721 4 -0.4068603515625 5 Unmodified _HSDPSILGY_ ENSG00000146830|ENST00000678049|GIGYF1 74.42276476219924 0.019389277360085 2 [HS]DPS{I|L}{I|L}GY 9 0 + 61.641 0.0 0.0 6.2424 6.2424 92.217 0.0 0.0 0.0 2.632192780232785 39.20146196958932 2.632192780232785 22.41811817498017 0 1.2302046884880935 0.0 1.579689690656103 0.0 + + [HS]DPS{I|L}{I|L}GY;[HS]D{I|L}[PS]{I|L}GY;{[CP]|[EA]}{I|L}[WH]{I|L}GY;[HT]{I|L}[PS][DV]GY;[HT]{I|L}{I|L}S[{M(Oxidation (M))|F}E]AA;{[TV]|[{I|L}S]}[HD][PS]{I|L}GY;[HT]{I|L}AAD{M(Oxidation (M))|F}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MG]|[TS]}{[YD]|[{M(Oxidation (M))|F}M]}Y;[HS]D{I|L}[VG][TP]Y;[KT][YT]QQGY 6.2424;3.9721;3.6396;2.4324;2.2567;1.844;1.5031;1.3377;0.75119;0.62147 +;-;-;-;-;-;-;-;-;- + 767 1 2.025 66771.8 1.0 4000 3475 7472 DOHH2_400M_050219_2,7477 DOHH2_400M_050219_2,7477,HSDPSILGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7478 40.829 189.0 377410.0 25 0 37697.0 + 32920 SEKLDYITY 9 94 566.2814073026734 1130.5482616721467 2 566.2820922732353 MULTI CID FTMS 0 0 0 7472 263652.5 0.3061598259033694 -1 0.0875663757324218 6 Unmodified _SEKLDYITY_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000446317.1_1_20:3471092-3471287:-|nuORF;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 51.629811660486645 0.0367964933207742 2 {[ES]|[DT]|[{I|L}C]}K{I|L}DY{I|L}TY 9 0 + 45.429 0.0 0.0 4.0183 4.0183 72.155 0.0 0.0 0.0 3.0153844027245924 7.739824496852137 3.0153844027245924 3.0102999566398125 0 0.8935078169319297 0.0 1.1421590589602533 0.0 + + {[ES]|[DT]|[{I|L}C]}K{I|L}DY{I|L}TY;{[ES]|[DT]|[{I|L}C]}K{I|L}YD{I|L}TY;[{I|L}T]AATDY{I|L}TY;[{I|L}T]AATYD{I|L}TY;{[MG]|[TS]}[VG]{I|L}DY{I|L}TY;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}KTD{I|L}TY;{[MG]|[TS]}[VG]{I|L}YD{I|L}TY;{[ES]|[DT]|[{I|L}C]}K{I|L}DYT{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}KC{I|L}{I|L}TY;{[MG]|[TS]}[R{I|L}]DY{I|L}TY 4.0183;3.752;3.7516;3.4853;3.4701;3.2342;3.2038;3.154;3.1485;2.9775 +;-;-;-;-;-;-;-;-;- + 1107 1 2.025 59153.0 1.0 4001 3475 7472 DOHH2_400M_050219_2,7478 DOHH2_400M_050219_2,7478,SEKLDYITY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7479 40.834 303.0 205920.0 25 0 26450.0 + 43415 WREAVLVA 8 93 472.2701932251518 942.5258335171036 2 472.2698852419853 MULTI CID FTMS 0 0 0 7472 242448.40625 0.790708200318817 -3 0.2819442749023437 7 Unmodified _WREAVLVA_ REV__ENSG00000178297|ENST00000696167|TMPRSS9;REV__nc|ENSG00000178297|Q7Z410|TMPRSS9 5.230669730166228 0.792582437072536 2 {I|L} 1 -1 10.837 0.0 0.0 1.1498 0.0 0.0 811.430906614563 0.0 811.430906614563 0.0 10.352905371428536 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1498 + + 3 + 1 2.025 57437.1 1.0 4002 3475 7472 DOHH2_400M_050219_2,7479 DOHH2_400M_050219_2,7479,WREAVLVA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7480 40.842 402.0 417320.0 25 0 40386.0 + 7052 EELGFRPEY 9 130 570.2716954590559 1138.5288379849117 2 570.2717773318291 MULTI CID FTMS 0 0 0 7472 191739.53125 0.0790238064229358 -2 0.1919937133789062 8 Unmodified _EELGFRPEY_ ENSG00000143799|ENST00000366794|PARP1 82.5293158979368 0.0169039238599547 2 EE{I|L}G{M(Oxidation (M))|F}R[EP]Y 9 0 + 91.947 0.0 0.0 8.076 8.076 97.272 0.0 0.0 0.0 76.3566032266867 20.75643416741073 20.75643416741073 33.840925825650515 0 0.7302046884880937 2.0 1.2059771852360797 0.2742275032520141 + + EE{I|L}G{M(Oxidation (M))|F}R[EP]Y;EE{I|L}G{M(Oxidation (M))|F}YW[VP];EE{I|L}G{M(Oxidation (M))|F}Y[VP]W;EE{I|L}G{M(Oxidation (M))|F}[HV]P[DP];EE{I|L}[HT][YG]KY;EE{I|L}{[ES]|[DT]|[{I|L}C]}{[QN]|[E{I|L}]|[KN]}KY;EE{I|L}G{M(Oxidation (M))|F}QQAA{M(Oxidation (M))|F};[EP]V[HT]{M(Oxidation (M))|F}G{I|L}[HC];EE{I|L}[TP]E[HV]W;{[ET]|[MV]}{[VA]|[{I|L}G]}Y{M(Oxidation (M))|F}G{I|L}[HC] 8.076;5.1036;4.9721;4.6272;4.1985;4.1985;4.1705;3.8837;3.7392;3.5365 +;-;-;-;-;-;-;-;-;- + 1336 + 1 2.025 128521.0 1.0 4003 3475 7472 DOHH2_400M_050219_2,7480 DOHH2_400M_050219_2,7480,EELGFRPEY True True EELGFRPEY 40.84158 570.271777331829 36284733.0 7472.0 ENSG00000143799|ENST00000366794|PARP1 7.795067151387532 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7481 40.855 800.0 205980.0 25 0 25668.0 -1 0 139 1138.4837186487784 2274.952884364357 2 1138.485034167767 MULTI CID FTMS 0 0 0 7472 119838.8359375 1.0 0 0.0 9 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TSED[{M(Oxidation (M))|F}V]KP 10 -1 45.355 0.0 0.0 1.9936 0.0 0.0 0.0 1134.4030642244084 1134.4030642244084 23.408336046439047 0.0 0.0 0.0 0 0.0 2.0 0.7742275032520141 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TSED[{M(Oxidation (M))|F}V]KP 1.9936 - 96331 1 2.025 110195.6 0.5699999928474426 4004 3475 7472 DOHH2_400M_050219_2,7481 DOHH2_400M_050219_2,7481, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7482 40.869 800.0 284940.0 25 0 14502.0 + 12292 GSDFYSMHY 9 176 553.7162369791815 1105.417921025163 2 553.7158080935478 MULTI CID FTMS 0 0 0 7472 125343.9296875 0.7444180787730909 -1 0.0875663757324218 10 Unmodified _GSDFYSMHY_ ENSG00000196704|ENST00000359904|AMZ2;ENST00000584350.1_1_17:66246608-66253107:+|nuORF;nc|ENSG00000196704|Q86W34-5|AMZ2 85.35673624503755 0.0162188719545379 2 [SG]D{M(Oxidation (M))|F}YSMHY 9 0 + 75.957 0.0 0.0 6.8714 6.8714 79.573 0.0 0.0 0.0 19.366130211356065 0.6694678963061307 0.6694678963061307 0.6694678963061307 0 0.9604093769761874 1.2218487496163564 0.7302046884880937 0.0 + + [SG]D{M(Oxidation (M))|F}YSMHY;[SG]D{M(Oxidation (M))|F}YSMNW;[SG]D{M(Oxidation (M))|F}YSMYH;[SG]D{M(Oxidation (M))|F}YSMGGW;[SG]D{M(Oxidation (M))|F}Y[HM]SY;[SG]D{M(Oxidation (M))|F}{[SA]|[TG]}Y{[CA]|SS}W;[SG]D{M(Oxidation (M))|F}Y[C(Carbamidomethyl (C))R]{[DS]|[MA]|[CV]|TT};[SG]D{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}D[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[SG]D{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[SG]D{M(Oxidation (M))|F}[QA]CYC{I|L} 6.8714;6.8108;6.486;5.9778;4.7435;3.7605;3.259;3.2359;3.1898;2.9109 +;-;-;-;-;-;-;-;-;- + 2379 + 1 2.025 174456.0 0.6100000143051147 4005 3475 7472 DOHH2_400M_050219_2,7482 DOHH2_400M_050219_2,7482,GSDFYSMHY True True GSDFYSMHY 40.869276 553.715808093548 1022926.5625 7472.0 ENST00000584350.1_1_17:66246608-66253107:+|nuORF;;ENSG00000196704|ENST00000359904|AMZ2;;nc|ENSG00000196704|Q86W34-5|AMZ2 9.464926719665527 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7483 40.877 415.0 312260.0 25 0 13659.0 -1 0 129 395.22935897601553 394.22208250941554 1 395.2281982302666 MULTI CID FTMS 0 0 0 7472 105764.25 0.5212792354122703 -1 0.0875663757324218 11 2 {I|L} 1 -1 14.604 0.0 0.0 3.7045 0.0 0.0 263.12697250140616 0.0 263.12697250140616 0.0 3.1774187340745623 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.7045 - 28 + 1 2.025 102274.0 1.0 4006 3475 7472 DOHH2_400M_050219_2,7483 DOHH2_400M_050219_2,7483, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7484 40.891 800.0 250830.0 25 0 13766.0 + 38462 TSDFSRFTNY 10 187 619.2774941108855 1236.540435288571 2 619.2777587771416 MULTI CID FTMS 0 0 0 7472 90302.59375 0.3907761042732065 -1 0.0875663757324218 12 Unmodified _TSDFSRFTNY_ ENSG00000175305|ENST00000308108|CCNE2;nc|ENSG00000175305|O96020-2|CCNE2 150.61878029816774 4.2759518620235246e-05 2 TSD{M(Oxidation (M))|F}SR{M(Oxidation (M))|F}TNY 10 0 + 107.34 0.0 0.0 8.6807 8.6807 83.105 0.0 0.0 0.0 73.74623447346616 13.521825181113629 13.521825181113629 1.1349936396813265 0 2.637591837382481 1.6989700043360187 0.7059771852360797 1.5010912013506126 + + TSD{M(Oxidation (M))|F}SR{M(Oxidation (M))|F}TNY;TSDYAR{M(Oxidation (M))|F}TNY;TSD{M(Oxidation (M))|F}YRATNY;TSDY{M(Oxidation (M))|F}RATNY;TSYDAR{M(Oxidation (M))|F}TNY;TSYD{M(Oxidation (M))|F}RATNY;TSD{M(Oxidation (M))|F}SR{M(Oxidation (M))|F}TGGY;TSDYAR{M(Oxidation (M))|F}TGGY;TSD{M(Oxidation (M))|F}YRATGGY;TSDY{M(Oxidation (M))|F}RATGGY 8.6807;8.5889;8.5305;8.4387;8.0082;7.8581;7.4743;7.3825;7.3241;7.2324 +;-;-;-;-;-;-;-;-;- + 14251 + 1 2.025 149246.8 0.5699999928474426 4007 3475 7472 DOHH2_400M_050219_2,7484 DOHH2_400M_050219_2,7484,TSDFSRFTNY True True TSDFSRFTNY 40.890515 619.277758777142 2152176.75 7472.0 nc|ENSG00000175305|O96020-2|CCNE2;;ENSG00000175305|ENST00000308108|CCNE2 7.809072812398274 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7485 40.902 562.0 121090.0 25 0 9030.2 + 28951 QDAPLLPGW 9 120 498.7590168387918 995.5034807443836 2 498.7593566775322 MULTI CID FTMS 0 0 0 7472 91527.78125 0.4738123041699085 2 -0.1890945434570312 13 Unmodified _QDAPLLPGW_ REV__ENST00000554503.5_1_12:57629544-57630899:-|nuORF 21.74664581756881 0.2544899275067181 2 {[QD]|[EN]|[WG]|[KD]|[RS]}A 3 -1 24.749 0.0 0.0 2.4861 0.0 0.0 0.0 678.3579173501055 678.3579173501055 13.911866397379056 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.3494850021680094 {[QD]|[EN]|[WG]|[KD]|[RS]}A 2.4861 + + 89 1 2.025 55304.1 1.0 4008 3475 7472 DOHH2_400M_050219_2,7485 DOHH2_400M_050219_2,7485,QDAPLLPGW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7487 40.908 82.0 708780.0 25 0 88478.0 + 12446 GTVYEDLRY 9 72 558.2720860411114 1114.529619149023 2 558.2722656130791 MULTI CID FTMS 0 0 0 7486 588558.6875 0.0563355999171848 5 -0.429473876953125 1 Unmodified _GTVYEDLRY_ chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-2|UBE2C 47.594388314883695 0.0456443387682827 2 {[SA]|[TG]}VYED{I|L}RY 9 0 + 79.065 0.0 0.0 7.094 7.094 94.249 0.0 0.0 0.0 44.68170056051526 12.587418566968154 12.587418566968154 19.195925227640984 0 1.0994850021680094 1.3979400086720375 0.4247425010840047 0.0 + + {[SA]|[TG]}VYED{I|L}RY;{[SA]|[TG]}VYEDY[R{I|L}];[YE]D[R{I|L}]V{[SA]|[TG]}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE[R{M(Oxidation (M))|F}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YE]D[R{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;[YT]K{[{M(Oxidation (M))|F}H]|[RQ]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y 7.094;5.3717;2.3056;1.7392;1.7243;0.68808 +;-;-;-;-;- + 124 + 1 2.03 52491.8 1.0 4009 3476 7486 DOHH2_400M_050219_2,7487 DOHH2_400M_050219_2,7487,GTVYEDLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7488 40.91 86.0 667470.0 25 0 55417.0 + 35149 SRGDFVVEY 9 64 536.2588183568016 1070.5030837804031 2 536.2590820193291 MULTI CID FTMS 0 0 0 7486 457723.15625 0.064726038136089 5 -0.429473876953125 2 Unmodified _SRGDFVVEY_ ENSG00000183955|ENST00000402868|KMT5A;ENST00000437519.5_1_12:123868737-123892247:+|nuORF;nc|ENSG00000183955|Q9NQR1|KMT5A 19.361941925380144 0.3125782356748823 2 {M(Oxidation (M))|F}VVEY 5 4 46.454 0.0 0.0 4.3394 0.0 0.0 415.181444236525 0.0 415.181444236525 0.0 35.48455006504028 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + {M(Oxidation (M))|F}VVEY 4.3394 + + 65 1 2.03 50494.5 1.0 4010 3476 7486 DOHH2_400M_050219_2,7488 DOHH2_400M_050219_2,7488,SRGDFVVEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7489 40.911 57.0 890580.0 25 0 199740.0 -1 0 70 479.277350532607 478.270074066007 1 479.2776061892509 MULTI CID FTMS 0 0 0 7486 923028.375 0.936824640166492 -1 0.0901069641113281 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.03 46985.4 1.0 4011 3476 7486 DOHH2_400M_050219_2,7489 DOHH2_400M_050219_2,7489, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7490 40.917 354.0 327620.0 25 0 29672.0 + 365 AEDELFNRY 9 117 578.7668604546395 1155.519167976079 2 578.7671386599541 MULTI CID FTMS 0 0 0 7486 207698.203125 0.1797149266781416 -1 0.0901069641113281 4 Unmodified _AEDELFNRY_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107 96.11092074494114 0.0124975504059861 2 AEDE{I|L}{M(Oxidation (M))|F}NRY 9 0 + 109.89 0.0 0.0 9.5102 9.5102 93.711 0.0 0.0 0.0 34.09256854528806 12.21848749616356 12.21848749616356 9.208187539523747 0 1.3494850021680094 2.0 1.3494850021680094 0.6861818737241735 + + AEDE{I|L}{M(Oxidation (M))|F}NRY;AEDE{I|L}{M(Oxidation (M))|F}GGRY;AEDE{I|L}{M(Oxidation (M))|F}Y[RN];AEDE{I|L}{M(Oxidation (M))|F}[KG]T{M(Oxidation (M))|F};AEDE{I|L}Y{M(Oxidation (M))|F}[RN];AEDE{I|L}{M(Oxidation (M))|F}[HA][QP];AEDEY{I|L}{M(Oxidation (M))|F}[RN];AEDYE{I|L}{M(Oxidation (M))|F}[RN];AEDE{I|L}{M(Oxidation (M))|F}[HA]A[PG];AEY{[HG]|PP}{M(Oxidation (M))|F}[KG]T{M(Oxidation (M))|F} 9.5102;8.7133;8.4528;8.0098;7.6674;7.4456;7.0625;6.0901;5.69;5.3263 +;-;-;-;-;-;-;-;-;- + 739 + 1 2.03 90590.9 1.0 4012 3476 7486 DOHH2_400M_050219_2,7490 DOHH2_400M_050219_2,7490,AEDELFNRY True True AEDELFNRY 40.917332 578.767138659954 10557104.0 7486.0 ENSG00000111581|ENST00000229179|NUP107;;nc|ENSG00000111581|P57740-3|NUP107;;nc|ENSG00000111581|P57740-2|NUP107 6.710308074951172 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7491 40.923 289.0 403370.0 25 0 53933.0 + 31835 RTEEALQLY 9 115 561.7926685369897 1121.570784140779 2 561.7930175662041 MULTI CID FTMS 0 0 0 7486 206909.015625 0.3855117805724922 -1 0.0901069641113281 5 Unmodified _RTEEALQLY_ ENSG00000174780|ENST00000642900|SRP72 29.84058131909904 0.1515068451768857 2 EA{I|L}Q{I|L}Y 6 3 53.18 0.0 0.0 4.7416 0.0 0.0 386.1913624494157 0.0 386.1913624494157 0.0 29.71253489819958 0.0 0.0 0 1.0 0.0 0.2742275032520141 0.3807196863200844 + EA{I|L}Q{I|L}Y 4.7416 + + 335 1 2.03 92959.5 1.0 4013 3476 7486 DOHH2_400M_050219_2,7491 DOHH2_400M_050219_2,7491,RTEEALQLY False True RTEEALQLY 40.922648 561.793017566204 6811873.0 7486.0 ENSG00000174780|ENST00000642900|SRP72 5.828001022338867 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7492 40.929 338.0 326380.0 25 0 28230.0 -1 GYYWFHRMAHE 11 93 756.8286218790255 1511.642690824851 2 756.8295165896416 MULTI CID FTMS 0 0 0 7486 198212.9375 1.0 0 0.0 6 Oxidation (M) _GYYWFHRM(Oxidation (M))AHE_ ENSG00000187546|ENST00000342526|AGMO 2.735195868890462 0.8622431031272658 2 ANQQA[DN]S{M(Oxidation (M))|F}Y 10 -1 54.87 0.0 0.0 3.6298 0.0 0.0 355.152296387797 0.0 355.152296387797 0.0 41.68243764792422 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 ANQQA[DN]S{M(Oxidation (M))|F}Y 3.6298 - 811 + 1 2.03 82037.3 1.0 4014 3476 7486 DOHH2_400M_050219_2,7492 DOHH2_400M_050219_2,7492,GYYWFHRMAHE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7493 40.936 393.0 146950.0 25 0 8402.1 + -1 FSEKLRCRDEK 11 99 734.3725094278982 1466.7304659225963 2 734.3732177615166 MULTI CID FTMS 0 0 0 7486 145421.421875 0.4393998365901522 2 -0.1971969604492187 7 Carbamidomethyl (C) _FSEKLRC(Carbamidomethyl (C))RDEK_ REV__ENST00000274056.11_1_4:164446528-164446588:-|nuORF 5.731851221503515 0.8481046878870278 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L} 4 -1 32.932 0.0 0.0 2.2453 0.0 0.0 0.0 1045.4870326552714 1045.4870326552714 -0.4318250140072166 0.0 -0.4318250140072166 0.0 0 0.5 1.5228787452803376 1.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L} 2.2453 - 552 1 2.03 45847.2 1.0 4015 3476 7486 DOHH2_400M_050219_2,7493 DOHH2_400M_050219_2,7493,FSEKLRCRDEK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7494 40.95 800.0 210050.0 25 0 11220.0 + 33449 SIDPGADLSQY 11 180 583.2720288603823 1164.5295047875643 2 583.2727538943291 MULTI CID FTMS 0 0 0 7486 101930.4765625 1.0 0 0.0 8 Unmodified _SIDPGADLSQY_ ENSG00000101773|ENST00000327155|RBBP8;nc|ENSG00000101773|Q99708-2|RBBP8;nc|ENSG00000101773|Q99708-3|RBBP8 70.33199760932243 0.0314424197347918 2 {[TV]|[{I|L}S]}QPDD{I|L}SQY 10 3 + 54.071 0.0 0.0 4.6432 4.6432 71.056 0.0 0.0 0.0 7.100718042197343 4.312412373755876 4.312412373755876 0.5044166166358153 0 0.8882104921644451 2.0 1.4968328665259174 0.0 {[TV]|[{I|L}S]}QPDD{I|L}SQY;{[TV]|[{I|L}S]}D[QP]D{I|L}SQY;[AG]PD{I|L}SD{I|L}SQY;{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}SD{I|L}SQY;[AG]DP{I|L}SD{I|L}SQY;[EP]N{I|L}SD{I|L}SQY;{[TV]|[{I|L}S]}[AG]PDD{I|L}SQY;[AG]PDD{I|L}S{I|L}SQY;{[QD]|[EN]|[WG]|[KD]|[RS]}PD{I|L}S{I|L}SQY;[AG]DPD{I|L}S{I|L}SQY 4.6432;4.5999;4.0334;4.0101;3.979;3.9302;3.8562;3.8138;3.7904;3.7593 -;-;-;-;-;-;-;-;-;- 8201 1 2.03 125381.6 0.5600000023841858 4016 3476 7486 DOHH2_400M_050219_2,7494 DOHH2_400M_050219_2,7494,SIDPGADLSQY True True SIDPGADLSQY 40.949698 583.272753894329 1451894.375 7486.0 nc|ENSG00000101773|Q99708-3|RBBP8;;nc|ENSG00000101773|Q99708-2|RBBP8;;ENSG00000101773|ENST00000327155|RBBP8 6.610227902730306 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7495 40.964 800.0 146110.0 25 0 16641.0 + 38585 TTDFPGNYSGY 11 146 611.2563810020872 1220.4982090709743 2 611.2566406130791 MULTI CID FTMS 0 0 0 7486 98087.65625 0.0824306454948998 15 -1.1044349670410156 9 Unmodified _TTDFPGNYSGY_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 51.629811660486645 0.1086041609037681 2 {[DS]|[MA]|[CV]|TT}D{M(Oxidation (M))|F}{M(Oxidation (M))|F}QRSGY 10 4 {[DS]|[MA]|[CV]|TT}D{M(Oxidation (M))|F}{M(Oxidation (M))|F}QR + + 19.297 18.655 2.0835 1.5811 1.5811 47.168 0.0 0.0 0.0 0.0 -4.11983599878339 -4.11983599878339 0.0 0 0.0 0.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}D{M(Oxidation (M))|F}{M(Oxidation (M))|F}QRSGY 1.5811 - 457 + 1 2.03 88294.7 0.5699999928474426 4017 3476 7486 DOHH2_400M_050219_2,7495 DOHH2_400M_050219_2,7495,TTDFPGNYSGY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7496 40.972 459.0 262210.0 25 0 17782.0 + 11124 GEHGDSSVPVW 11 162 585.2651877071243 1168.5158224810484 2 585.2652465701103 MULTI CID FTMS 0 0 0 7486 95526.2109375 0.9674137328094612 1 -0.0989875793457031 10 Unmodified _GEHGDSSVPVW_ ENSG00000134333|ENST00000422447|LDHA;ENSG00000166800|ENST00000280706|LDHAL6A;ENSG00000171989|ENST00000307144|LDHAL6B;ENST00000394996.2_1_10:120692379-120692769:-|nuORF;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-5|LDHA 34.40172386719151 0.2986346176549658 2 [VP]EE{[DA]|[EG]}QPS[TP] 11 9 + 33.861 0.0 0.0 2.8978 2.8978 66.505 0.0 0.0 0.0 7.390016856306516 7.205551320904217 7.205551320904217 0.9640156839957824 0 0.8182503180159344 1.3979400086720375 0.5 0.0 [VP]EE{[DA]|[EG]}QPS[TP];[VP]EE{[DA]|[EG]}QPV{[DA]|[EG]};[VP]EEMH{[QN]|[E{I|L}]|[KN]}W;[VP]EEMH{[ET]|[MV]}[TP];[VP]EEMH[QT][QA];[VP]EE{M(Oxidation (M))|F}WY{[TV]|[{I|L}S]};EE[VP]MH{[QN]|[E{I|L}]|[KN]}W;[VP]EE{[DA]|[EG]}{M(Oxidation (M))|F}Y{[TV]|[{I|L}S]};[VP]EEMH{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]};{[CT]|[{M(Oxidation (M))|F}G]}VP{[QG]|[NA]}{[{M(Oxidation (M))|F}D]|MM}[R{M(Oxidation (M))|F}] 2.8978;2.8153;2.5429;1.8374;1.5798;1.4464;1.3992;1.3576;1.2392;1.1812 -;-;-;-;-;-;-;-;-;- 753 1 2.03 92707.6 1.0 4018 3476 7486 DOHH2_400M_050219_2,7496 DOHH2_400M_050219_2,7496,GEHGDSSVPVW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7497 40.986 800.0 144710.0 25 0 7433.4 + -1 SAWLSPEPP 9 149 513.2505623966737 1024.4865718601473 2 513.2520019412041 MULTI CID FTMS 0 0 0 7486 91562.96875 1.0 0 0.0 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SAWLSPEPP_ REV__ENST00000487247.5_1_7:75612754-75613000:+|nuORF 20.453626601364224 0.2830276176381075 2 {[CP]|[EA]}W 3 -1 17.319 0.0 0.0 1.6905 0.0 0.0 0.0 635.3046969049436 635.3046969049436 -0.2114847922558382 0.0 -0.2114847922558382 0.0 0 0.6861818737241735 0.0 0.0 0.0 {[CP]|[EA]}W 1.6905 - 536 + 1 2.03 90963.4 0.4799999892711639 4019 3476 7486 DOHH2_400M_050219_2,7497 DOHH2_400M_050219_2,7497,SAWLSPEPP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7498 41.001 800.0 166900.0 25 0 14050.0 -1 0 126 599.6365052502617 1795.887686350985 3 599.6406127810478 MULTI CID FTMS 0 0 0 7486 119328.8046875 0.4211853246787053 -4 0.3720512390136719 12 2 [H{I|L}][NP]{I|L}CWE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}H{I|L}Q 14 -1 + 78.603 0.0 0.0 4.3768 4.3768 75.895 0.0 0.0 0.0 13.010299956639813 0.0 0.0 5.058582469088293 0 0.3807196863200844 1.6989700043360187 0.0 0.6694451763165201 [H{I|L}][NP]{I|L}CWE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP]H[HT]MDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[H{I|L}][NP]H[HK]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP]{I|L}TETS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP]{I|L}CGQ[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP]{I|L}{[{M(Oxidation (M))|F}D]|MM}MDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP][VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[H{I|L}][NP]{I|L}CG[NG]S{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP]{I|L}C(Carbamidomethyl (C))Q[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q 4.3768;4.0952;4.0945;3.9876;3.9275;3.9113;3.8729;3.8611;3.8132;3.8033 -;-;-;-;-;-;-;-;-;- 11423 1 2.03 103301.3 0.6100000143051147 4020 3476 7486 DOHH2_400M_050219_2,7498 DOHH2_400M_050219_2,7498, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7500 41.006 54.0 937030.0 25 0 136540.0 + 33135 SEVDLTRSF 9 67 527.2640445742322 1052.5135362152644 2 527.2644531130791 MULTI CID FTMS 0 0 0 7499 850761.75 0.4123834257355938 1 -0.0982093811035156 1 Unmodified _SEVDLTRSF_ ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2 38.61474834105838 0.0830609365873449 2 {[ES]|[DT]|[{I|L}C]}VD{I|L}TT 7 3 43.716 0.0 0.0 4.1535 0.0 0.0 0.0 304.1459139459594 304.1459139459594 32.12221349969987 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}VD{I|L}TT 4.1535 - 85 + 1 2.03 46100.2 1.0 4021 3477 7499 DOHH2_400M_050219_2,7500 DOHH2_400M_050219_2,7500,SEVDLTRSF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7501 41.007 74.0 539070.0 25 0 81435.0 + 13513 HMPITLIS 8 57 456.2565331763432 910.4985134194864 2 456.2564269900322 MULTI CID FTMS 0 0 0 7499 579544.5 1.0 0 0.0 2 Unmodified _HMPITLIS_ REV__ENSG00000197181|ENST00000356766|PIWIL2;REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2 2.889219685676258 0.8067950007271085 2 {I|L} 1 -1 10.713 0.0 0.0 1.1766 0.0 0.0 779.4036780696802 0.0 779.4036780696802 0.0 0.5360498482393439 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1766 + + 3 + 1 2.03 37857.0 1.0 4022 3477 7499 DOHH2_400M_050219_2,7501 DOHH2_400M_050219_2,7501,HMPITLIS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7502 41.009 83.0 800960.0 25 0 73834.0 + 426 AEELFARKF 9 92 555.8007878444893 1109.5870227557784 2 555.8009521365166 MULTI CID FTMS 0 0 0 7499 638209.125 1.0 0 0.0 3 Unmodified _AEELFARKF_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 43.77239144664712 0.0547478964384323 2 AEE{I|L}{M(Oxidation (M))|F}ARK{M(Oxidation (M))|F} 9 0 + 81.987 0.0 0.0 7.389 7.389 96.525 0.0 0.0 0.0 61.55388247842919 8.098269928065392 8.098269928065392 40.28714835437864 0 1.274227503252014 1.6989700043360187 0.4247425010840047 0.3807196863200844 + + AEE{I|L}{M(Oxidation (M))|F}ARK{M(Oxidation (M))|F};AEE{I|L}[RP]{[QN]|[E{I|L}]|[KN]}[PG];A{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[KP]PK{M(Oxidation (M))|F} 7.389;3.7581;2.5408 +;-;- + 149 + 1 2.03 55596.3 1.0 4023 3477 7499 DOHH2_400M_050219_2,7502 DOHH2_400M_050219_2,7502,AEELFARKF True True AEELFARKF 41.009225 555.800952136517 2663867.75 7499.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 0.9821270561466614 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7503 41.011 75.0 876700.0 25 0 75243.0 + 350 AEASMISKL 9 100 475.2551644608157 948.4957759884314 2 475.2550536990166 MULTI CID FTMS 0 0 0 7499 519742.15625 1.0 0 0.0 4 Unmodified _AEASMISKL_ ENSG00000055130|ENST00000325222|CUL1 41.95555342248728 0.0647214845423414 2 {[CP]|[EA]}ASM{I|L}SK{I|L} 9 0 + 45.64 0.0 0.0 4.8118 4.8118 84.008 0.0 0.0 0.0 20.32232346685614 11.382805414149786 11.382805414149786 9.960762528683702 0 0.805462187404089 0.0 0.7742275032520141 0.0 + + {[CP]|[EA]}ASM{I|L}SK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[ET]|[MV]}QSK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[QT]ESK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[ET]|[MV]}[AG]SK{I|L};[YV][DP]QSK{I|L};{[CP]|[EA]}ASM[KS]{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KS]S{I|L}A{[CP]|[EA]};[YV][NP]ESK{I|L};[YV][DP][AG]SK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[ET]|[MV]}{[ET]|[MV]}{I|L}{I|L} 4.8118;3.7617;3.0247;2.7852;2.306;2.1309;1.6223;1.569;1.3295;1.0807 +;-;-;-;-;-;-;-;-;- + 328 + 1 2.03 58003.2 1.0 4024 3477 7499 DOHH2_400M_050219_2,7503 DOHH2_400M_050219_2,7503,AEASMISKL True True AEASMISKL 41.01095 475.255053699017 4790370.0 7499.0 ENSG00000055130|ENST00000325222|CUL1 6.470175425211589 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7504 41.013 124.0 402520.0 25 0 72339.0 + -1 LLMLLIGW 8 78 487.79067362394665 973.5667943146932 2 487.7907287478447 MULTI CID FTMS 0 0 0 7499 484941.8125 1.0 0 0.0 5 Oxidation (M) _LLM(Oxidation (M))LLIGW_ REV__ENST00000451786.5_1_7:130737210-130792560:-|nuORF 6.354104778181461 0.7857632046190106 2 W 1 -1 12.474 0.0 0.0 1.2813 0.0 0.0 769.4762772021918 0.0 769.4762772021918 0.0 2.2931892451282465 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.2813 + + 8 + 1 2.03 45090.3 1.0 4025 3477 7499 DOHH2_400M_050219_2,7504 DOHH2_400M_050219_2,7504,LLMLLIGW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7505 41.016 130.0 397130.0 25 0 25557.0 -1 RCHRRRRRCCC 11 74 866.9070133939276 1731.7994738546552 2 866.9094116091728 MULTI CID FTMS 0 0 0 7499 326538.5 0.0403427282096037 -13 1.1818618774414062 6 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 2 [MN][NP]{I|L}NADQ[QP]AN{I|L} 14 -1 45.605 0.0 0.0 2.6334 0.0 0.0 0.0 208.07326685123283 208.07326685123283 20.86828217823566 0.0 0.0 0.0 0 0.7302046884880937 1.5228787452803376 0.0 0.0 [MN][NP]{I|L}NADQ[QP]AN{I|L} 2.6334 - 704 + 1 2.03 42105.0 1.0 4026 3477 7499 DOHH2_400M_050219_2,7505 DOHH2_400M_050219_2,7505,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7506 41.02 225.0 405140.0 25 0 68451.0 27161 PFSNAACH 8 107 423.6811413261904 845.3477297191807 2 423.6814453005791 MULTI CID FTMS 0 0 0 7499 306439.875 1.0 0 0.0 7 Unmodified _PFSNAACH_ nc|ENSG00000064419|Q9Y5L0-1|TNPO3 2.889219685676258 0.8067950007271085 2 VV{I|L} 3 8 30.062 0.0 0.0 3.5561 0.0 0.0 0.0 531.1031673014651 531.1031673014651 16.082268588648247 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 VV{I|L} 3.5561 - 64 1 2.03 78123.7 1.0 4027 3477 7499 DOHH2_400M_050219_2,7506 DOHH2_400M_050219_2,7506,PFSNAACH False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 7507 41.024 161.0 585680.0 25 0 54853.0 + 25822 NLAERIKSL 9 118 522.3135005526871 1042.612448172174 2 522.3138915896416 MULTI CID FTMS 0 0 0 7499 300050.5 0.3523445537654082 -1 0.0989875793457031 8 Unmodified _NLAERIKSL_ ENSG00000110344|ENST00000252108|UBE4A;nc|ENSG00000110344|Q14139-2|UBE4A 69.33821966488729 0.021354776001734 2 {[QV]|[N{I|L}]|[RA]|[KV]}AER{I|L}KS{I|L} 9 0 + 67.232 0.0 0.0 6.4484 6.4484 94.458 0.0 0.0 0.0 24.04034160721965 53.30662485208818 24.04034160721965 67.23162232407793 0 2.304024105181816 2.0 0.0 0.6109243748081782 + + {[QV]|[N{I|L}]|[RA]|[KV]}AER{I|L}KS{I|L} 6.4484 + + 351 1 2.03 76416.9 1.0 4028 3477 7499 DOHH2_400M_050219_2,7507 DOHH2_400M_050219_2,7507,NLAERIKSL True True NLAERIKSL 41.023581 522.313891589642 4022334.25 7499.0 ENSG00000110344|ENST00000252108|UBE4A;;nc|ENSG00000110344|Q14139-2|UBE4A 4.925879796346028 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7508 41.029 288.0 316070.0 25 0 30845.0 + 19230 LEHEYIQNF 9 105 596.7851250229105 1191.555697112621 2 596.7855102419853 MULTI CID FTMS 0 0 0 7499 293993.40625 1.0 0 0.0 9 Unmodified _LEHEYIQNF_ ENSG00000101367|ENST00000375571|MAPRE1 47.74868867922204 0.0453060283459952 2 [H{I|L}]EEY{I|L}QN{M(Oxidation (M))|F} 9 2 + 69.095 0.0 0.0 5.7987 5.7987 80.334 0.0 0.0 0.0 6.478947790856822 9.699463174498456 6.478947790856822 3.8907562519182193 0 0.6421590589602533 1.0969100130080565 0.7302046884880937 0.0 [H{I|L}]EEY{I|L}QN{M(Oxidation (M))|F};[H{I|L}]EEYQ{I|L}N{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}EY{I|L}QN{M(Oxidation (M))|F};[H{I|L}]EYE{I|L}QN{M(Oxidation (M))|F};[H{I|L}]EEY{I|L}QGG{M(Oxidation (M))|F};[H{I|L}]EEY{I|L}[AG]N{M(Oxidation (M))|F};[AG]DW{I|L}E{I|L}QN{M(Oxidation (M))|F};{[YC]|[HE]}{I|L}EYQ{I|L}N{M(Oxidation (M))|F};[H{I|L}]EYEQ{I|L}N{M(Oxidation (M))|F};{[YC]|[HE]}E{I|L}Y{I|L}QN{M(Oxidation (M))|F} 5.7987;5.4722;5.255;5.2528;5.0259;5.0259;5.0157;4.9285;4.9263;4.7497 -;-;-;-;-;-;-;-;-;- 2028 1 2.03 73543.8 1.0 4029 3477 7499 DOHH2_400M_050219_2,7508 DOHH2_400M_050219_2,7508,LEHEYIQNF True True LEHEYIQNF 41.028872 596.785510241985 1425028.75 7499.0 ENSG00000101367|ENST00000375571|MAPRE1 6.540926456451416 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7509 41.032 156.0 360470.0 25 0 43429.0 + 21021 LNVVRDRG 8 97 464.7702889225754 927.5260249119508 2 464.7700988650322 MULTI CID FTMS 0 0 0 7499 275371.0625 1.0 0 0.0 10 Unmodified _LNVVRDRG_ REV__ENSG00000065183|ENST00000349139|WDR3 4.75600775471527 0.7954636275367004 2 {I|L} 1 -1 10.837 0.0 0.0 1.1684 0.0 0.0 796.4309759390977 0.0 796.4309759390977 0.0 -0.4047540638161973 -0.4047540638161973 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1684 + + 22 + 1 2.03 50014.3 1.0 4030 3477 7499 DOHH2_400M_050219_2,7509 DOHH2_400M_050219_2,7509,LNVVRDRG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7510 41.035 175.0 323940.0 25 0 30530.0 + 19132 TSERGSFSLY 10 74 573.7743372640399 1145.5341215948797 2 573.7746459841728 MULTI CID FTMS 0 0 0 7499 250954.71875 0.8614881159271036 -1 0.0989875793457031 11 Unmodified _LDYLTMDIY_ nc|ENSG00000140262|Q99081|TCF12;ENSG00000140262|ENST00000333725|TCF12 23.1484247019978 0.2366544122328345 2 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[YN]D{I|L}Y 9 5 + 40.391 0.0 0.0 3.526 3.526 68.815 0.0 0.0 0.0 2.611943190733683 27.4595372608497 2.611943190733683 1.7609125905568064 0 1.0 1.3010299956639813 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[YN]D{I|L}Y;{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YQ]S{I|L}Y;{[ET]|[MV]}[KT][YN]D{I|L}Y;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[DN]YY;{[DS]|[MA]|[CV]|TT}[RD][YQ]S{I|L}Y;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WR]YY;{[ET]|[MV]}[KT]{I|L}[DN]YY;{[ET]|[MV]}[KT][WR]YY 3.526;3.3723;2.7376;2.1932;2.1674;1.8904;1.4048;1.1021 -;-;-;-;-;-;-;- 111 1 2.03 48546.8 1.0 4031 3477 7499 DOHH2_400M_050219_2,7510 DOHH2_400M_050219_2,7510,LDYLTMDIY False False TSERGSFSLY 41.035364 573.774645984173 1685154.5 7499.0 nc|ENSG00000140262|Q99081|TCF12;;ENSG00000140262|ENST00000333725|TCF12 -0.1947721689939499 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7511 41.039 209.0 322870.0 25 0 22946.0 + 4815 DETDSGAGLKW 11 108 589.7698995734717 1177.5252462137432 2 589.7700683474541 MULTI CID FTMS 0 0 0 7499 205305.609375 1.0 0 0.0 12 Unmodified _DETDSGAGLKW_ ENSG00000160049|ENST00000377038|DFFA;nc|ENSG00000160049|O00273-2|DFFA 51.41523569358685 0.1097924807909074 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TDSQG{I|L}KW 10 2 + 63.726 0.0 0.0 5.4119 5.4119 77.445 0.0 0.0 0.0 42.0670586374718 12.01667520279372 12.01667520279372 3.0102999566398125 0 1.048455006504028 1.3979400086720375 0.0 0.2887254899964357 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TDSQG{I|L}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TDQSG{I|L}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ESSQG{I|L}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TDS[AG]G{I|L}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ESQSG{I|L}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TD[AG]SG{I|L}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TDK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ESS[AG]G{I|L}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ES[AG]SG{I|L}KW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ESK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KW 5.4119;5.1562;4.7955;4.6336;4.5399;4.378;4.3502;4.0172;3.7616;3.7339 -;-;-;+;-;-;-;-;-;- + 341 + 1 2.03 54550.9 1.0 4032 3477 7499 DOHH2_400M_050219_2,7511 DOHH2_400M_050219_2,7511,DETDSGAGLKW True True DETDSGAGLKW 41.039354 589.770068347454 1249249.125 7499.0 nc|ENSG00000160049|O00273-2|DFFA;;ENSG00000160049|ENST00000377038|DFFA 5.789807478586833 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7512 41.049 535.0 321680.0 25 0 22353.0 + 4805 DEQDSVRLL 9 132 537.7750967377632 1073.5356405423263 2 537.7748901247978 MULTI CID FTMS 0 0 0 7499 192310.625 0.4981795706336713 -1 0.0989875793457031 13 Unmodified _DEQDSVRLL_ ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B 99.7552728972412 0.0110101799492648 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QDSVR{I|L}{I|L} 9 0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} + + 62.248 6.4659 2.6492 5.7984 5.7984 58.721 0.0 0.0 0.0 0.0 24.473622650646654 0.0 0.0 0 1.4731975075880328 0.0 0.75 0.9361818737241734 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QDSVR{I|L}{I|L} 5.7984 + + 423 + 1 2.03 132353.7 1.0 4033 3477 7499 DOHH2_400M_050219_2,7512 DOHH2_400M_050219_2,7512,DEQDSVRLL True True DEQDSVRLL 41.048766 537.774890124798 2025231.5 7499.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 5.681173165639241 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7513 41.052 178.0 383310.0 25 0 61390.0 + 13749 HRPSHFLNF 9 80 385.5332214409034 1153.57783492291 3 385.5331909060478 MULTI CID FTMS 0 0 0 7499 182931.828125 1.0 0 0.0 14 Unmodified _HRPSHFLNF_ ENSG00000174231|ENST00000304992|PRPF8 17.44264345198275 0.3645313841742926 2 N{M(Oxidation (M))|F} 2 7 15.815 0.0 0.0 1.371 0.0 0.0 874.4542825320883 0.0 874.4542825320883 0.0 1.3784939400354563 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 + N{M(Oxidation (M))|F} 1.371 + + 38 + 1 2.03 61232.7 1.0 4034 3477 7499 DOHH2_400M_050219_2,7513 DOHH2_400M_050219_2,7513,HRPSHFLNF False True HRPSHFLNF 41.052205 385.533190906048 1120752.375 7499.0 ENSG00000174231|ENST00000304992|PRPF8 6.744541009267171 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7514 41.057 265.0 277720.0 25 0 19658.0 + + 755 RSPDFASSF 9 101 507.23811595922535 1012.4616789852508 2 507.2381469607353 MULTI CID FTMS 0 0 0 7499 163162.625 1.0 0 0.0 15 Unmodified _AEQRFESF_ ENSG00000185043|ENST00000328649|CIB1;nc|ENSG00000185043|Q99828-2|CIB1 44.40701690623563 0.1655546087385432 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[KC]ASS{M(Oxidation (M))|F} 9 -1 + 58.253 0.0 0.0 5.7536 5.7536 83.713 0.0 0.0 0.0 4.013189010928357 38.67631754564208 4.013189010928357 7.256820375752753 0 1.3494850021680094 1.154901959985743 0.8807196863200843 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[KC]ASS{M(Oxidation (M))|F};[TA]M[W{I|L}]ASS{M(Oxidation (M))|F};[TA][WP]{M(Oxidation (M))|F}ASS{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[DP]{M(Oxidation (M))|F}ASS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}E[KC]ASS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[KQ]{M(Oxidation (M))|F}DS{M(Oxidation (M))|F};[WK][{I|L}A]{M(Oxidation (M))|F}DS{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}A[{I|L}A]{M(Oxidation (M))|F}DS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[KQ]{M(Oxidation (M))|F}SD{M(Oxidation (M))|F};[TA]M[W{I|L}][MN]{M(Oxidation (M))|F} 5.7536;5.0369;5.0369;4.853;4.2199;3.0037;2.9255;2.6733;1.8421;1.8068 -;-;-;-;-;-;-;-;-;- 212 1 2.03 61295.7 1.0 4035 3477 7499 DOHH2_400M_050219_2,7514 DOHH2_400M_050219_2,7514,AEQRFESF False False RSPDFASSF 41.057102 507.238146960735 1001959.0 7499.0 ENSG00000185043|ENST00000328649|CIB1;;nc|ENSG00000185043|Q99828-2|CIB1 7.302914460500081 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7515 41.065 423.0 160010.0 25 0 12250.0 + 26310 NRGVIITM 8 96 452.2587688133731 902.5029846935462 2 452.2586852908134 MULTI CID FTMS 0 0 0 7499 141722.03125 1.0 0 0.0 16 Unmodified _NRGVIITM_ ENSG00000113732|ENST00000519374|ATP6V0E1;ENSG00000171130|ENST00000425642|ATP6V0E2;nc|ENSG00000171130|Q8NHE4-2|ATP6V0E2;nc|ENSG00000171130|Q8NHE4-3|ATP6V0E2;nc|ENSG00000171130|Q8NHE4-4|ATP6V0E2 37.97399986684836 0.2681860861828418 2 [RN][R{I|L}]{I|L}TM 7 2 + 36.699 0.0 0.0 4.0664 4.0664 69.106 0.0 0.0 0.0 2.0188568173469434 17.614189627179915 2.0188568173469434 0.5799194697768684 0 0.5 0.0 0.4247425010840047 0.6237125054200234 [RN][R{I|L}]{I|L}TM;[RN][VG]{I|L}{I|L}TM;[RN]K{I|L}{I|L}EM;[VG][RN]{I|L}{I|L}TM 4.0664;4.0021;3.6734;3.4057 -;+;-;- + 106 1 2.03 56896.9 1.0 4036 3477 7499 DOHH2_400M_050219_2,7515 DOHH2_400M_050219_2,7515,NRGVIITM False True NRGVIITM 41.064629 452.258685290813 459540.8125 7499.0 ENSG00000171130|ENST00000425642|ATP6V0E2;;nc|ENSG00000171130|Q8NHE4-4|ATP6V0E2;;ENSG00000113732|ENST00000519374|ATP6V0E1;;nc|ENSG00000171130|Q8NHE4-3|ATP6V0E2;;nc|ENSG00000171130|Q8NHE4-2|ATP6V0E2 4.325303157170613 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7516 41.074 474.0 163430.0 25 0 15534.0 37637 TLLNVPDL 8 103 442.7566674285961 883.4987819239923 2 442.7567016482353 MULTI CID FTMS 0 0 0 7499 133162.046875 1.0 0 0.0 17 Unmodified _TLLNVPDL_ ENSG00000104067|ENST00000614355|TJP1;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1 8.593279151180031 0.7721714526254883 2 {I|L} 1 7 9.3323 0.0 0.0 1.0563 0.0 0.0 752.4037787275064 0.0 752.4037787275064 0.0 4.115780317228301 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0563 + + 14 + 1 2.03 66523.6 1.0 4037 3477 7499 DOHH2_400M_050219_2,7516 DOHH2_400M_050219_2,7516,TLLNVPDL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7517 41.088 800.0 132740.0 25 0 9976.7 + 33172 SEYFRDMGY 9 134 584.2427512977341 1166.470949662268 2 584.2442504763603 MULTI CID FTMS 0 0 0 7499 125142.8125 1.0 0 0.0 18 Unmodified _SEYFRDMGY_ ENSG00000114573|ENST00000273398|ATP6V1A;nc|ENSG00000114573|P38606-2|ATP6V1A 24.99096001346401 0.2132109383330889 2 {[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}[HN][HA]Y 9 4 + 26.417 0.0 0.0 2.2647 2.2647 68.099 0.0 0.0 0.0 6.724309029657295 6.411962188136545 6.411962188136545 3.0102999566398125 0 0.805462187404089 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}[HN][HA]Y;{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[TP]Y;{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}[WY]SW;{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}[HN]{[QG]|[NA]}W;{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}[HN][HS]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}[WY]C(Carbamidomethyl (C)){I|L};{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[DV]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}Y[HK]{[QC]|[C(Carbamidomethyl (C))A]}SW;{[ES]|[DT]|[{I|L}C]}Y{M(Oxidation (M))|F}[WY][CG]{I|L};{[ES]|[DT]|[{I|L}C]}Y{[CT]|[{M(Oxidation (M))|F}G]}[WE]H{I|L} 2.2647;2.0066;1.6546;1.5851;1.0193;0.96186;0.76119;0.19352;0.16783;0.10757 -;-;-;-;-;-;-;-;-;- 537 + 1 2.03 82731.5 0.5600000023841858 4038 3477 7499 DOHH2_400M_050219_2,7517 DOHH2_400M_050219_2,7517,SEYFRDMGY False True SEYFRDMGY 41.08802 584.24425047636 940459.5625 7499.0 nc|ENSG00000114573|P38606-2|ATP6V1A;;ENSG00000114573|ENST00000273398|ATP6V1A 6.700815041859944 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7518 41.094 357.0 178820.0 25 0 15032.0 + 15754 ISALITAY 8 124 426.2480226048679 850.4814922765358 2 426.2476989626884 MULTI CID FTMS 0 0 0 7499 109757.34375 1.0 0 0.0 19 Unmodified _ISALITAY_ REV__ENSG00000113716|ENST00000502717|HMGXB3 5.230669730166228 0.792582437072536 2 {NN|[MP]|[D{I|L}]|[EV]}H 3 -1 18.952 0.0 0.0 2.2284 0.0 0.0 0.0 482.2951573978828 482.2951573978828 10.413705284069229 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}H 2.2284 - 73 1 2.03 55387.2 1.0 4039 3477 7499 DOHH2_400M_050219_2,7518 DOHH2_400M_050219_2,7518,ISALITAY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7519 41.099 246.0 181820.0 25 0 22158.0 37265 TINNPNLL 8 80 449.7534763435129 897.4923997538258 2 449.7526428103447 MULTI CID FTMS 0 0 0 7499 94822.828125 1.0 0 0.0 20 Unmodified _TINNPNLL_ ENSG00000181381|ENST00000682922|DDX60L;nc|ENSG00000181381|Q5H9U9-2|DDX60L 14.581692164780916 0.6954967302934248 2 [{I|L}T]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H 5 5 18.454 0.0 0.0 2.0562 0.0 0.0 0.0 309.21259485416255 309.21259485416255 3.85029351276792 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 [{I|L}T]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H 2.0562 - 104 + 1 2.03 40537.8 1.0 4040 3477 7499 DOHH2_400M_050219_2,7519 DOHH2_400M_050219_2,7519,TINNPNLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7521 41.104 47.0 668830.0 25 0 144520.0 + 37684 TLNEKLTAL 9 53 501.7947483099927 1001.5749436867852 2 501.7950317263603 MULTI CID FTMS 0 0 0 7520 723221.0 0.1714993318193992 2 -0.1752967834472656 1 Unmodified _TLNEKLTAL_ ENSG00000254999|ENST00000530758|BRK1;nc|ENSG00000254999|Q8WUW1-2|BRK1 21.53697664764585 0.2571576504437394 2 [{I|L}T][RN]TA 6 4 42.72 0.0 0.0 4.2653 0.0 0.0 0.0 342.20297038039786 342.20297038039786 28.74098423245101 0.0 0.0 0.0 0 0.5 2.0 0.805462187404089 0.0 [{I|L}T][RN]TA 4.2653 - 80 1 2.033 32264.9 1.0 4041 3478 7520 DOHH2_400M_050219_2,7521 DOHH2_400M_050219_2,7521,TLNEKLTAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7522 41.105 45.0 1169600.0 25 0 118310.0 + 7053 EELGFRPEY 9 72 570.2716954590559 1138.5288379849117 2 570.2722045779228 MULTI CID FTMS 0 0 0 7520 917243.8125 0.378034185277772 1 -0.1195564270019531 2 Unmodified _EELGFRPEY_ ENSG00000143799|ENST00000366794|PARP1 32.78568957990786 0.1150597335874693 2 EE{I|L}G{M(Oxidation (M))|F}R[EP]Y 9 0 + 61.756 0.0 0.0 5.4242 5.4242 90.601 0.0 0.0 0.0 48.26151861349551 6.478174818886373 6.478174818886373 61.756368635175605 0 0.3807196863200844 2.0 0.0 0.3054621874040891 + + EE{I|L}G{M(Oxidation (M))|F}R[EP]Y 5.4242 + + 66 + 1 2.033 46850.7 1.0 4042 3478 7520 DOHH2_400M_050219_2,7522 DOHH2_400M_050219_2,7522,EELGFRPEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7523 41.107 48.0 1546400.0 25 0 72890.0 -1 0 69 902.9182897976564 1803.8220266621124 2 902.9197875857352 MULTI CID FTMS 0 0 0 7520 1392909.75 1.0 0 0.0 3 2 [MN]PNN{I|L}EE[RH][Y{M(Oxidation (M))|F}]{I|L}Q 14 -1 + 82.195 0.0 0.0 4.5567 4.5567 72.794 0.0 0.0 0.0 53.48390117247135 5.219287460610119 5.219287460610119 1.989700043360188 0 1.6307196863200843 1.3979400086720375 0.4247425010840047 0.6549471895720984 [MN]PNN{I|L}EE[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]PN{I|L}NEE[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]P[HV]RQEEN[Y{M(Oxidation (M))|F}]{I|L}Q;[NP]M[HV]RQEEN[Y{M(Oxidation (M))|F}]{I|L}K;[NP]{I|L}NM[RH]EEN[Y{M(Oxidation (M))|F}]{I|L}K;[MN]P[HV]RQEEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NEE{[{M(Oxidation (M))|F}H]|[RQ]}D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q[MN];[NP]{I|L}NM[RH]EE{I|L}N{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]M[HV]RQEEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NM[RH]EEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.5567;4.4464;3.1927;2.9384;2.8429;2.7762;2.6641;2.5367;2.5219;2.4264 -;-;-;-;-;-;-;-;-;- 1060 + 1 2.033 52215.0 1.0 4043 3478 7520 DOHH2_400M_050219_2,7523 DOHH2_400M_050219_2,7523, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7524 41.108 62.0 993610.0 25 0 87579.0 + -1 LFMPISLL 8 76 475.2771023522244 948.5396517712488 2 475.2770568728447 MULTI CID FTMS 0 0 0 7520 696083.6875 1.0 0 0.0 4 Oxidation (M) _LFM(Oxidation (M))PISLL_ REV__ENSG00000105642|ENST00000684775|KCNN1;REV__nc|ENSG00000105642|Q92952-2|KCNN1 36.46614268402704 0.2934124525509074 2 S{I|L}{I|L} 3 -1 24.186 0.0 0.0 2.5498 0.0 0.0 617.323534080275 0.0 617.323534080275 0.0 17.196596782814815 0.0 0.0 0 0.566901560044258 0.0 0.4247425010840047 0.0 S{I|L}{I|L} 2.5498 + + 161 1 2.033 51239.5 1.0 4044 3478 7520 DOHH2_400M_050219_2,7524 DOHH2_400M_050219_2,7524,LFMPISLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7525 41.11 85.0 622540.0 25 0 54137.0 + 32808 SEFGNHYLY 9 88 565.250921976253 1128.487291019306 2 565.2513305544853 MULTI CID FTMS 0 0 0 7520 578488.5 1.0 0 0.0 5 Unmodified _SEFGNHYLY_ ENSG00000189091|ENST00000302516|SF3B3 46.020951573049366 0.0490941689151868 2 {M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}Y{I|L}Y 6 5 20.15 0.0 0.0 1.7856 0.0 0.0 308.1233082501969 0.0 308.1233082501969 0.0 5.457574905606748 0.0 0.0 0 0.6237125054200234 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}Y{I|L}Y 1.7856 - 116 1 2.033 43865.3 1.0 4045 3478 7520 DOHH2_400M_050219_2,7525 DOHH2_400M_050219_2,7525,SEFGNHYLY True True SEFGNHYLY 41.110182 565.251330554485 3631746.0 7520.0 ENSG00000189091|ENST00000302516|SF3B3 7.736084938049316 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7526 41.113 146.0 293660.0 25 0 11429.0 -1 0 76 910.4217595233204 1818.8289661134409 2 910.9200317263604 MULTI CID FTMS 0 0 0 7520 347512.5625 0.1279663648426687 4 -0.3308830261230469 6 2 QDAN{I|L}{[NV]|[RG]}[QP] 9 -1 32.598 0.0 0.0 1.7922 0.0 0.0 821.403123924025 0.0 821.403123924025 0.0 16.399699876253784 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.5 QDAN{I|L}{[NV]|[RG]}[QP] 1.7922 - 257 1 2.033 34940.2 1.0 4046 3478 7520 DOHH2_400M_050219_2,7526 DOHH2_400M_050219_2,7526, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7527 41.119 316.0 197280.0 25 0 7688.6 -1 0 92 917.4294408659848 1832.8443287987693 2 917.9343749880792 MULTI CID FTMS 0 0 0 7520 317942.5 0.3171854576090516 2 -0.1752967834472656 7 2 [NP]{I|L}[PG]E[DV]QADNKN[WH] 16 -1 + 32.239 0.0 0.0 1.759 1.759 64.654 0.0 0.0 0.0 5.609112683611528 14.61426266193143 5.609112683611528 0.6888128940781257 0 0.0 0.0 0.0 0.0 [NP]{I|L}[PG]E[DV]QADNKN[WH];[NP]{I|L}[WP][DV]QADNKN[WH];[NP]{I|L}[PG]E[DV]QWNKN[WH];[NP]{I|L}[PG]E[WR]ADNKN[WH];[NP]{I|L}[WP][WR]ADNKN[YC(Carbamidomethyl (C))];[NP]{I|L}[WP][DV]QWNKN[YC(Carbamidomethyl (C))];[Q{I|L}][HT]Q[DV]QADNKN[WH];[NP]{I|L}[PG]E[WR]WNKN[YC(Carbamidomethyl (C))];[NP]{I|L}[WP][WR]WNKN[YC(Carbamidomethyl (C))];[C(Carbamidomethyl (C))R][YK][DV]QADNKN[WH] 1.759;1.7214;1.3929;1.3929;1.3564;1.3564;1.2968;1.0279;0.99256;0.9318 -;-;-;-;-;-;-;-;-;- 1037 1 2.033 46313.6 1.0 4047 3478 7520 DOHH2_400M_050219_2,7527 DOHH2_400M_050219_2,7527, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7528 41.123 203.0 323670.0 25 0 33314.0 + 24454 MHIPTGVI 8 107 434.2421425517554 866.4697321703109 2 434.2426635622978 MULTI CID FTMS 0 0 0 7520 319106.1875 1.0 0 0.0 8 Unmodified _MHIPTGVI_ REV__ENSG00000133059|ENST00000367162|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-3|DSTYK 2.889219685676258 0.8067950007271085 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 6 1 2.033 57504.1 1.0 4048 3478 7520 DOHH2_400M_050219_2,7528 DOHH2_400M_050219_2,7528,MHIPTGVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7529 41.127 214.0 212510.0 25 0 34255.0 6715 EDEVILLL 8 73 472.2701932251518 942.5258335171036 2 472.2702819705009 MULTI CID FTMS 0 0 0 7520 306621.84375 1.0 0 0.0 9 Unmodified _EDEVILLL_ ENSG00000188827|ENST00000294008|SLX4;nc|ENSG00000188827|Q8IY92-2|SLX4 2.577480529830294 0.808687252328423 2 {I|L} 1 7 10.379 0.0 0.0 1.1011 0.0 0.0 811.4306166975708 0.0 811.4306166975708 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1011 + + 4 + 1 2.033 41509.6 1.0 4049 3478 7520 DOHH2_400M_050219_2,7529 DOHH2_400M_050219_2,7529,EDEVILLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7530 41.134 372.0 272350.0 25 0 12672.0 + 17974 KRLNFITEY 9 121 592.3273823958874 1182.6402118585747 2 592.3277465701103 MULTI CID FTMS 0 0 0 7520 183356.890625 1.0 0 0.0 10 Unmodified _KRLNFITEY_ ENSG00000106683|ENST00000336180|LIMK1;ENST00000483414.1_1_7:73511493-73523492:+|nuORF;nc|ENSG00000106683|P53667-2|LIMK1;nc|ENSG00000106683|P53667-4|LIMK1 58.6788170122104 0.0268135626297836 2 {M(Oxidation (M))|F}{I|L}TEY 5 4 53.047 0.0 0.0 4.4855 0.0 0.0 511.3234120099625 0.0 511.3234120099625 0.0 37.81865655543953 0.0 0.0 0 1.1861818737241734 0.0 0.9247425010840048 0.0 + {M(Oxidation (M))|F}{I|L}TEY 4.4855 + + 580 1 2.033 78952.3 1.0 4050 3478 7520 DOHH2_400M_050219_2,7530 DOHH2_400M_050219_2,7530,KRLNFITEY True True KRLNFITEY 41.133511 592.32774657011 1380417.5 7520.0 ENSG00000106683|ENST00000336180|LIMK1;;nc|ENSG00000106683|P53667-2|LIMK1;;nc|ENSG00000106683|P53667-4|LIMK1;;ENST00000483414.1_1_7:73511493-73523492:+|nuORF 5.901395479838054 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7531 41.139 285.0 135660.0 25 0 12635.0 -1 0 63 728.021287401152 2181.042032803656 3 728.3563110232353 MULTI CID FTMS 0 0 0 7520 173995.125 1.0 0 0.0 11 2 TGYGM 5 -1 29.196 0.0 0.0 1.3386 0.0 0.0 1046.452873723381 622.3686577908155 1668.821531514196 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 TGYGM 1.3386 - 43 + 1 2.033 39308.6 1.0 4051 3478 7520 DOHH2_400M_050219_2,7531 DOHH2_400M_050219_2,7531, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7532 41.145 333.0 290150.0 25 0 33845.0 + 22908 LSDIVIEKY 9 111 540.3030953587572 0 540.3025390505791 PEAK CID FTMS 0 0 0 7520 167230.140625 1.0 0 0.0 12 Unmodified _LSDIVIEKY_ ENSG00000184465|ENST00000448612|WDR27;ENST00000546953.1_1_6:170072345-170089107:-|nuORF;nc|ENSG00000184465|A2RRH5-2|WDR27;nc|ENSG00000184465|A2RRH5-3|WDR27;nc|ENSG00000184465|A2RRH5|WDR27 74.19965305603844 0.0183649874100916 2 SD{I|L}V{I|L}EK 7 2 40.456 0.0 0.0 3.7508 0.0 0.0 113.08742805230244 178.05132471256096 291.1387527648634 0.0 0.0 0.0 0.0 0 1.4802046884880935 0.0 0.3494850021680094 0.0 + SD{I|L}V{I|L}EK 3.7508 + + 270 + 1 2.033 77073.1 1.0 4052 3478 7520 DOHH2_400M_050219_2,7532 DOHH2_400M_050219_2,7532,LSDIVIEKY True True LSDIVIEKY 41.144828 540.302539050579 1226783.125 7520.0 nc|ENSG00000184465|A2RRH5-3|WDR27;;ENST00000546953.1_1_6:170072345-170089107:-|nuORF;;nc|ENSG00000184465|A2RRH5-2|WDR27;;nc|ENSG00000184465|A2RRH5|WDR27;;ENSG00000184465|ENST00000448612|WDR27 6.829885800679524 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7533 41.159 800.0 101530.0 25 0 5513.4 + -1 SVMEANPSADLY 12 119 648.7932724886502 1295.5719920441004 2 648.7955810427666 MULTI CID FTMS 0 0 0 7520 113674.328125 1.0 0 0.0 13 Carbamidomethyl (C) _C(Carbamidomethyl (C))FLPFSFCLY_ ENSG00000241973|ENST00000255882|PI4KA;ENST00000485963.5_1_22:21152870-21213097:-|nuORF 15.847184025352805 0.5816416552707754 2 [VS]MEA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[CS]{I|L}Y 11 -1 [VS]MEA{M(Oxidation (M))|F} + + 25.251 28.267 4.255 1.949 1.949 47.403 0.0 0.0 0.0 0.0 -3.0156325993663806 -3.0156325993663806 0.0 0 0.8807196863200843 0.0 0.2887254899964357 0.0 [VS]MEA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[CS]{I|L}Y 1.949 - 556 + 1 2.033 64502.9 0.5899999737739563 4053 3478 7520 DOHH2_400M_050219_2,7533 DOHH2_400M_050219_2,7533,CFLPFSFCLY False False SVMEANPSADLY 41.158665 648.795581042767 659330.75 7520.0 ENSG00000241973|ENST00000255882|PI4KA;;ENST00000485963.5_1_22:21152870-21213097:-|nuORF 7.823304653167725 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7534 41.167 500.0 328510.0 25 0 18989.0 + 441 AEFEEPRVI 9 169 545.2829830047282 1088.5514130762565 2 545.2827636599541 MULTI CID FTMS 0 0 0 7520 176756.171875 1.0 0 0.0 14 Unmodified _AEFEEPRVI_ ENSG00000163956|ENST00000650182|LRPAP1;ENST00000296325.9_1_4:3514703-3533784:-|nuORF;ENST00000515119.5_1_4:3517776-3534065:-|nuORF 26.020703789607367 0.2001090068861241 2 [{I|L}T][R{I|L}]EE{M(Oxidation (M))|F} 7 8 42.616 0.0 0.0 3.915 0.0 0.0 0.0 197.0580009073481 197.0580009073481 29.85224046712337 0.0 0.0 0.0 0 0.8494850021680094 1.3010299956639813 0.9896518287104438 0.0 [{I|L}T][R{I|L}]EE{M(Oxidation (M))|F} 3.915 - 631 1 2.033 124573.2 1.0 4054 3478 7520 DOHH2_400M_050219_2,7534 DOHH2_400M_050219_2,7534,AEFEEPRVI False True AEFEEPRVI 41.167501 545.282763659954 956398.875 7520.0 ENST00000296325.9_1_4:3514703-3533784:-|nuORF;;ENST00000515119.5_1_4:3517776-3534065:-|nuORF;;ENSG00000163956|ENST00000650182|LRPAP1 6.303670883178711 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7535 41.176 404.0 221480.0 25 0 20346.0 + 23726 LTVHGLVYL 9 150 507.8050324083637 1013.5955118835274 2 508.3008911013603 MULTI CID FTMS 0 0 0 -1 0 15 Unmodified _LTVHGLVYL_ REV__ENSG00000146828|ENST00000354161|SLC12A9;REV__nc|ENSG00000146828|Q9BXP2-2|SLC12A9;REV__nc|ENSG00000146828|Q9BXP2-3|SLC12A9;REV__nc|ENSG00000146828|Q9BXP2-4|SLC12A9 12.531546534597751 0.4974689918368763 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}A[TP]KQ{I|L} 9 -1 + 24.196 0.0 0.0 2.3871 2.3871 66.009 0.0 0.0 0.0 7.535014192041991 5.479553813795533 5.479553813795533 1.2687323638550012 0 0.0 0.5528419686577808 0.0 0.3807196863200844 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}A[TP]KQ{I|L};{[TV]|[{I|L}S]}{I|L}D[TP]KQ{I|L};Q[KT]A[TP]KQ{I|L};Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}KQ{I|L};[WK]KT{I|L}{I|L}[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}A[TP]K[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}T[TP]{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}D[TP]K[AG]{I|L};{[TV]|[{I|L}S]}{I|L}[H{I|L}][YR]{I|L};{[SA]|[TG]}RKT{I|L}{I|L}[EP] 2.3871;2.2619;1.371;1.22;1.1448;1.103;1.0735;0.97785;0.75898;0.57585 -;-;-;-;-;-;-;-;-;- 579 + 1 2.033 72497.5 1.0 4055 3478 7520 DOHH2_400M_050219_2,7535 DOHH2_400M_050219_2,7535,LTVHGLVYL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7536 41.19 800.0 75726.0 25 0 8040.4 -1 0 75 896.4414634945972 1790.8683740559943 2 896.4399902224541 MULTI CID FTMS 0 0 0 7520 95620.046875 1.0 0 0.0 16 2 Q 1 -1 15.485 0.0 0.0 0.86464 0.0 0.0 1644.7988682960315 0.0 1644.7988682960315 0.0 9.798187706630156 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.86464 - 15 + 1 2.033 46980.5 0.550000011920929 4056 3478 7520 DOHH2_400M_050219_2,7536 DOHH2_400M_050219_2,7536, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7537 41.204 800.0 52206.0 25 0 5115.1 -1 0 63 777.0335541504423 0 777.0333740115166 PEAK CID FTMS 0 0 0 7520 90973.734375 1.0 0 0.0 17 2 TGY 3 -1 16.198 0.0 0.0 1.0436 0.0 0.0 417.4696829839161 810.4289422523279 1227.898625236244 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TGY 1.0436 - 17 + 1 2.033 38625.5 0.5699999928474426 4057 3478 7520 DOHH2_400M_050219_2,7537 DOHH2_400M_050219_2,7537, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7538 41.219 800.0 79036.0 25 0 3603.6 + 13448 HLRDYFEEY 9 111 636.2874282475076 1270.560303561815 2 636.2892333865166 MULTI CID FTMS 0 0 0 7520 90016.328125 1.0 0 0.0 18 Unmodified _HLRDYFEEY_ ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000491091.1_1_3:122036542-122036854:+|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1 17.11289562659939 0.3734572693229295 2 SGEEY 5 6 36.938 0.0 0.0 2.9072 0.0 0.0 687.332436514152 0.0 687.332436514152 0.0 16.00833760139686 0.0 0.0 0 0.5 0.0 0.0 0.0 SGEEY 2.9072 - 248 1 2.033 53199.5 0.550000011920929 4058 3478 7520 DOHH2_400M_050219_2,7538 DOHH2_400M_050219_2,7538,HLRDYFEEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7540 41.223 67.0 728080.0 25 0 163000.0 -1 0 67 479.277350532607 478.270074066007 1 479.2775146365166 MULTI CID FTMS 0 0 0 7539 823427.0 0.835734549307191 2 -0.1127204895019531 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.033 45267.9 1.0 4059 3479 7539 DOHH2_400M_050219_2,7540 DOHH2_400M_050219_2,7540, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7541 41.228 272.0 235670.0 25 0 18787.0 + 366 AEDELFNRY 9 87 578.7668604546395 1155.519167976079 2 578.7672607302666 MULTI CID FTMS 0 0 0 7539 202600.578125 0.1753041070883529 2 -0.1127204895019531 2 Unmodified _AEDELFNRY_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107 53.832793166522166 0.0319663582346103 2 {[CP]|[EA]}DE{I|L}{M(Oxidation (M))|F}NRY 9 0 {[CP]|[EA]} + + 59.474 3.7236 1.8611 5.1469 5.1469 56.176 0.0 0.0 0.0 0.0 33.275779165182726 0.0 0.0 0 1.305462187404089 0.0 0.8494850021680094 0.0 + + {[CP]|[EA]}DE{I|L}{M(Oxidation (M))|F}NRY 5.1469 + + 269 + 1 2.033 53188.8 1.0 4060 3479 7539 DOHH2_400M_050219_2,7541 DOHH2_400M_050219_2,7541,AEDELFNRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7542 41.231 145.0 667940.0 25 0 62739.0 6589 EAPNQEKVSDY 11 102 640.2936793341825 1278.5728057351648 2 640.2941161990166 MULTI CID FTMS 0 0 0 7539 433465.25 0.3856401795439072 -2 0.2177658081054687 3 Unmodified _EAPNQEKVSDY_ ENSG00000132646|ENST00000379143|PCNA 29.84058131909904 0.3915366693542702 2 {[YD]|[{M(Oxidation (M))|F}M]}[YV]{I|L}E{I|L}SDY 10 7 + 82.929 0.0 0.0 6.486 6.486 92.182 0.0 0.0 0.0 13.282636354873816 45.434267342909024 13.282636354873816 17.46931475036361 0 1.805462187404089 1.5228787452803376 1.6791746928241125 0.0 {[YD]|[{M(Oxidation (M))|F}M]}[YV]{I|L}E{I|L}SDY;{[CA]|SS}[HQ]T{I|L}E{I|L}SDY;{[YD]|[{M(Oxidation (M))|F}M]}[YV]{I|L}T{I|L}DDY;{[YD]|[{M(Oxidation (M))|F}M]}[YV]{I|L}TPMDY;{[CA]|SS}[HQ]{[QN]|[E{I|L}]|[KN]}T{I|L}SDY;{[YD]|[{M(Oxidation (M))|F}M]}[YV]{I|L}S{[QN]|[E{I|L}]|[KN]}DY;{[CA]|SS}[HQ]T{I|L}T{I|L}DDY;{[YD]|[{M(Oxidation (M))|F}M]}[YV][TP]{I|L}MDY;{[YD]|[{M(Oxidation (M))|F}M]}[YV]{I|L}E[WE]Y;{[QN]|[E{I|L}]|[KN]}YED[Y{I|L}][TA]Y 6.486;5.1197;5.1118;4.8006;4.5127;3.8049;3.7455;3.566;3.4497;3.1812 -;-;-;-;-;-;-;-;-;- 553 1 2.033 75459.8 1.0 4061 3479 7539 DOHH2_400M_050219_2,7542 DOHH2_400M_050219_2,7542,EAPNQEKVSDY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7543 41.236 250.0 338440.0 25 0 32757.0 + 2652 ATDIKITVY 9 123 512.2892887719402 1022.5640246106803 2 512.2894775271416 MULTI CID FTMS 0 0 0 7539 280840.15625 0.8982021235500977 -1 0.1195564270019531 4 Unmodified _ATDIKITVY_ ENSG00000124596|ENST00000424266|OARD1 66.45667989310934 0.0225072657982126 2 [TA]D{I|L}[K{I|L}]TVY 9 0 + 70.446 0.0 0.0 6.8891 6.8891 86.675 0.0 0.0 0.0 19.06804392152253 14.09256854528806 14.09256854528806 6.505149978319906 0 1.8807196863200843 1.3979400086720375 1.610924374808178 0.0 + + [TA]D{I|L}[K{I|L}]TVY;[TA][{I|L}A]{I|L}TATVY;[TA][{I|L}A]{I|L}TTAVY;[TA]{[TV]|[{I|L}S]}VVATVY;{[TV]|[{I|L}S]}[VG]{I|L}TATVY;{[TV]|[{I|L}S]}[K{I|L}]EATVY;[TA]{[TV]|[{I|L}S]}VVTAVY;{[TV]|[{I|L}S]}[VG]{I|L}TTAVY;{[TV]|[{I|L}S]}[K{I|L}]ETAVY;{[ET]|[MV]}G{I|L}[K{I|L}]TVY 6.8891;6.253;6.036;5.0344;5.0244;4.8759;4.8174;4.8075;4.6589;4.5605 +;-;-;-;-;-;-;-;-;- + 915 1 2.033 72627.7 1.0 4062 3479 7539 DOHH2_400M_050219_2,7543 DOHH2_400M_050219_2,7543,ATDIKITVY True True ATDIKITVY 41.236 512.289477527142 4879070.0 7539.0 ENSG00000124596|ENST00000424266|OARD1 5.114881038665772 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7544 41.24 226.0 317920.0 25 0 23635.0 + 29432 QLFQRPNAL 9 98 543.8063780627862 1085.5982031923722 2 543.8062011599541 MULTI CID FTMS 0 0 0 7539 258477.046875 1.0 0 0.0 5 Unmodified _QLFQRPNAL_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 74.42276476219924 0.019389277360085 2 Q{I|L}{M(Oxidation (M))|F}QR[NP]A{I|L} 9 0 + 64.944 0.0 0.0 5.9823 5.9823 87.326 0.0 0.0 0.0 50.07393098725139 0.2904561281719964 0.2904561281719964 9.208187539523747 0 0.6549471895720984 2.0 0.0 0.7302046884880937 + + Q{I|L}{M(Oxidation (M))|F}QR[NP]A{I|L};Q{I|L}{M(Oxidation (M))|F}[AG]R[NP]A{I|L} 5.9823;5.1341 +;- + 292 + 1 2.033 62202.9 1.0 4063 3479 7539 DOHH2_400M_050219_2,7544 DOHH2_400M_050219_2,7544,QLFQRPNAL True True QLFQRPNAL 41.240267 543.806201159954 2224740.25 7539.0 nc|ENSG00000134644|Q14671|PUM1;;nc|ENSG00000134644|Q14671-4|PUM1;;nc|ENSG00000134644|Q14671-2|PUM1;;ENSG00000134644|ENST00000426105|PUM1 7.239460468292236 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7545 41.247 355.0 298290.0 25 0 28188.0 + 32921 SEKLDYITY 9 119 566.2814073026734 1130.5482616721467 2 566.2812377810478 MULTI CID FTMS 0 0 0 7539 233177.1875 0.2707711367411169 3 -0.2113265991210937 6 Unmodified _SEKLDYITY_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000446317.1_1_20:3471092-3471287:-|nuORF;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 63.960520009940105 0.0238892913700936 2 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}KC{I|L}TY 9 5 + 69.486 0.0 0.0 6.1463 6.1463 77.667 0.0 0.0 0.0 0.9578050786708588 16.478174818886366 0.9578050786708588 0.9578050786708588 0 1.0 0.958607314841775 0.6747425010840047 0.0 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}KC{I|L}TY;[YT]{I|L}DKD{I|L}TY;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}K{I|L}C{I|L}TY;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}KTDTY;[Y{I|L}]D{I|L}KTDTY;{[ES]|[DT]|[{I|L}C]}K{I|L}DY{I|L}TY;[YT]{I|L}DK{I|L}DTY;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}K{I|L}TDTY;[Y{I|L}]DK{I|L}TDTY;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}TKD{I|L}TY 6.1463;6.0615;6.0605;5.9014;5.882;5.8803;5.8167;5.8157;5.7963;5.7242 -;-;-;-;-;+;-;-;-;- + 3025 1 2.033 87567.4 1.0 4064 3479 7539 DOHH2_400M_050219_2,7545 DOHH2_400M_050219_2,7545,SEKLDYITY True True SEKLDYITY 41.246688 566.281237781048 14168802.0 7539.0 ENST00000446317.1_1_20:3471092-3471287:-|nuORF;;ENST00000470585.5_1_1:38445118-38455637:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 7.332662423451741 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7546 41.251 206.0 377900.0 25 0 39865.0 + 5159 DIKKGILL 8 100 450.2997332893816 898.5849136455632 2 450.2996703982353 MULTI CID FTMS 0 0 0 7539 203750.0625 0.6823393264057075 -2 0.2177658081054687 7 Unmodified _DIKKGILL_ ENSG00000104738|ENST00000649973|MCM4 32.30548876998284 0.3644845974844379 2 D{I|L}K 3 5 38.918 0.0 0.0 4.331 0.0 0.0 0.0 539.3559054010374 539.3559054010374 2.7720882015922257 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 + D{I|L}K 4.331 + + 208 + 1 2.033 67800.4 1.0 4065 3479 7539 DOHH2_400M_050219_2,7546 DOHH2_400M_050219_2,7546,DIKKGILL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7547 41.257 334.0 212240.0 25 0 23690.0 22952 LSETFLHIY 9 86 561.7926685369897 1121.570784140779 2 561.7929565310478 MULTI CID FTMS 0 0 0 7539 110893.5859375 0.2066163411956656 2 -0.1127204895019531 8 Unmodified _LSETFLHIY_ ENSG00000133121|ENST00000336934|STARD13;nc|ENSG00000133121|Q9Y3M8-2|STARD13;nc|ENSG00000133121|Q9Y3M8-3|STARD13;nc|ENSG00000133121|Q9Y3M8-4|STARD13 16.942295170755138 0.3780752226737986 2 A{I|L}Q{I|L}Y 5 6 42.691 0.0 0.0 3.8063 0.0 0.0 515.2319813459 0.0 515.2319813459 0.0 28.210152202969454 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 A{I|L}Q{I|L}Y 3.8063 - 213 1 2.033 56302.4 1.0 4066 3479 7539 DOHH2_400M_050219_2,7547 DOHH2_400M_050219_2,7547,LSETFLHIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7548 41.265 453.0 232840.0 25 0 20869.0 + 12447 GTVYEDLRY 9 117 558.2720860411114 1114.529619149023 2 558.2726318240166 MULTI CID FTMS 0 0 0 7539 111377.3359375 0.0106608043861673 8 -0.4428787231445312 9 Unmodified _GTVYEDLRY_ chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-2|UBE2C 60.07390631473393 0.0260411565414776 2 {[SA]|[TG]}VYED{I|L}RY 9 0 + 75.27 0.0 0.0 6.7535 6.7535 81.91 0.0 0.0 0.0 51.04446048438773 12.98332479720628 12.98332479720628 2.887254899964361 0 0.7134679910804405 1.3010299956639813 0.4247425010840047 0.3252574989159953 + + {[SA]|[TG]}VYED{I|L}RY;{[SA]|[TG]}YVED{I|L}RY;{[SA]|[TG]}VYEDYR{I|L};{[SA]|[TG]}YVEDYR{I|L};{[SA]|[TG]}VYED[HV][VP];{[SA]|[TG]}VYEYDR{I|L};{[SA]|[TG]}V{[WN]|[YH]}HV[R{M(Oxidation (M))|F}];{[SA]|[TG]}YVED[HV][VP];{[SA]|[TG]}YVEYDR{I|L};{[SA]|[TG]}VYYEDR{I|L} 6.7535;6.4944;4.9942;4.7352;4.3101;4.296;4.1699;4.0511;4.037;3.71 +;-;-;-;-;-;-;-;-;- + 516 + 1 2.033 90767.0 1.0 4067 3479 7539 DOHH2_400M_050219_2,7548 DOHH2_400M_050219_2,7548,GTVYEDLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7549 41.274 547.0 197750.0 25 0 11314.0 + 7803 ELIHRYVEL 9 151 586.3263284261262 0 586.3264648318291 PEAK CID FTMS 0 0 0 7539 104763.9609375 0.9332338842354042 -2 0.2177658081054687 10 Unmodified _ELIHRYVEL_ ENSG00000106367|ENST00000337619|AP1S1;nc|ENSG00000106367|P61966-2|AP1S1 55.50274090549119 0.0215595200729321 2 {I|L}{[ET]|[MV]}[RN]TE 7 6 24.595 0.0 0.0 2.101 0.0 0.0 242.1249648734532 82.06682764224843 324.1917925157016 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.4361818737241734 0.0 {I|L}{[ET]|[MV]}[RN]TE 2.101 - 595 + 1 2.033 82575.0 1.0 4068 3479 7539 DOHH2_400M_050219_2,7549 DOHH2_400M_050219_2,7549,ELIHRYVEL True True ELIHRYVEL 41.274334 586.326464831829 1005524.125 7539.0 ENSG00000106367|ENST00000337619|AP1S1;;nc|ENSG00000106367|P61966-2|AP1S1 0.1857901159673929 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7551 41.28 94.0 733670.0 25 0 109680.0 + 33136 SEVDLTRSF 9 62 527.2640445742322 1052.5135362152644 2 527.2643310427666 MULTI CID FTMS 0 0 0 7550 659159.9375 0.3195097019040993 4 -0.2570838928222656 1 Unmodified _SEVDLTRSF_ ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2 63.960520009940105 0.0238892913700936 2 {[ES]|[DT]|[{I|L}C]}VD{I|L}TRS{M(Oxidation (M))|F} 9 0 + 72.541 0.0 0.0 6.8921 6.8921 92.695 0.0 0.0 0.0 54.58175076054957 10.412800692342117 10.412800692342117 14.018637558036673 0 1.424742501084005 0.0 0.8494850021680094 0.7614393726401688 + + {[ES]|[DT]|[{I|L}C]}VD{I|L}TRS{M(Oxidation (M))|F};[VS]ED{I|L}TRS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[HA]T{I|L}DE[PA];{[ES]|[DT]|[{I|L}C]}V[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}[RH]TRS{M(Oxidation (M))|F};[VS]E[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}V[{I|L}V]G{[MS]|[{M(Oxidation (M))|F}A]}[MT];{[ES]|[DT]|[{I|L}C]}V[R{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}[MT];{[ES]|[DT]|[{I|L}C]}V[{I|L}V][YQ]{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}V[{I|L}V]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[MT] 6.8921;5.5602;3.2372;2.8498;1.8053;1.5179;1.3665;1.1992;1.1992;1.0319 +;-;-;-;-;-;-;-;-;- + 173 + 1 2.033 58008.4 1.0 4069 3480 7550 DOHH2_400M_050219_2,7551 DOHH2_400M_050219_2,7551,SEVDLTRSF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7552 41.283 138.0 419240.0 25 0 64565.0 8706 EVKVHSGR 8 88 456.2565331763432 910.4985134194864 2 456.2569457888603 MULTI CID FTMS 0 0 0 7550 325043.0625 0.5608595414157153 3 -0.2113838195800781 2 Unmodified _EVKVHSGR_ ENSG00000197081|ENST00000356956|IGF2R 5.230669730166228 0.792582437072536 2 {I|L} 1 8 10.379 0.0 0.0 1.1399 0.0 0.0 779.4035407405786 0.0 779.4035407405786 0.0 3.4673784689629974 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1399 - 12 + 1 2.033 52778.2 1.0 4070 3480 7550 DOHH2_400M_050219_2,7552 DOHH2_400M_050219_2,7552,EVKVHSGR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7553 41.285 117.0 587780.0 25 0 81072.0 27705 PLLAPAAA 8 104 362.2222620001882 722.4299710671764 2 362.2222167849541 MULTI CID FTMS 0 0 0 7550 439626.625 0.1095007301993553 6 -0.33782958984375 3 Unmodified _PLLAPAAA_ ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000532094.5_1_11:420655-431830:-|nuORF 0.7936320650641473 0.8195151834710337 2 A 1 7 3.9794 0.0 0.0 0.55084 0.0 0.0 361.20323874471393 287.16510950260005 648.368348247314 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.55084 + + 5 + 1 2.033 59530.4 1.0 4071 3480 7550 DOHH2_400M_050219_2,7553 DOHH2_400M_050219_2,7553,PLLAPAAA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7554 41.288 169.0 347660.0 25 0 59158.0 -1 MLLILGWI 8 93 487.79067362394665 973.5667943146932 2 487.7909728884697 MULTI CID FTMS 0 0 0 7550 302043.21875 0.6228442484530038 3 -0.2113838195800781 4 Oxidation (M) _M(Oxidation (M))LLILGWI_ ENSG00000100191|ENST00000266086|SLC5A4 2.889219685676258 0.8067950007271085 2 {M(Oxidation (M))|F} 1 -1 10.278 0.0 0.0 1.0557 0.0 0.0 808.4876602588324 0.0 808.4876602588324 0.0 0.1889428044469987 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0557 + + 11 + 1 2.033 53541.2 1.0 4072 3480 7550 DOHH2_400M_050219_2,7554 DOHH2_400M_050219_2,7554,MLLILGWI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7555 41.296 412.0 301890.0 25 0 30307.0 -1 0 114 599.6365052502617 1795.887686350985 3 599.6356689333916 MULTI CID FTMS 0 0 0 7550 283316.625 1.0 0 0.0 5 2 [H{I|L}][NP]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q 15 -1 + 83.063 0.0 0.0 4.6252 4.6252 84.373 0.0 0.0 0.0 13.802112417116064 0.0 0.0 13.802112417116064 0 1.6237125054200234 1.6989700043360187 0.805462187404089 0.0 [H{I|L}][NP]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[HA][RP]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H[VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[MT][KT]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}K;{[QN]|[E{I|L}]|[KN]}[DN]{M(Oxidation (M))|F}{I|L}[HV]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PH[VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;{[QN]|[E{I|L}]|[KN]}[DN]{I|L}{M(Oxidation (M))|F}[HV]DG{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP]{I|L}H{I|L}TEYDG[H{I|L}]{M(Oxidation (M))|F}{I|L}Q 4.6252;3.8566;3.7498;3.2458;3.1776;3.1478;3.1141;3.0708;3.0004;2.9485 -;-;-;-;-;-;-;-;-;- 3516 1 2.033 96485.2 1.0 4073 3480 7550 DOHH2_400M_050219_2,7555 DOHH2_400M_050219_2,7555, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7556 41.299 180.0 346710.0 25 0 17934.0 45679 YVWNVEVY 8 88 536.2588183568016 1070.5030837804031 2 536.2586547732353 MULTI CID FTMS 0 0 0 7550 163272.015625 0.0230880840647875 9 -0.5314483642578125 6 Unmodified _YVWNVEVY_ ENSG00000075702|ENST00000401500|WDR62;nc|ENSG00000075702|O43379-2|WDR62;nc|ENSG00000075702|O43379|WDR62 12.531546534597751 0.7257836412119636 2 {M(Oxidation (M))|F}VVEY 5 4 39.949 0.0 0.0 3.7318 0.0 0.0 415.1815663068375 0.0 415.1815663068375 0.0 28.52851693497493 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}VVEY 3.7318 - 154 1 2.033 56484.4 1.0 4074 3480 7550 DOHH2_400M_050219_2,7556 DOHH2_400M_050219_2,7556,YVWNVEVY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7557 41.305 346.0 202660.0 25 0 10669.0 427 AEELFARKF 9 102 555.8007878444893 1109.5870227557784 2 555.8010742068291 MULTI CID FTMS 0 0 0 7550 102256.3046875 0.160223821129947 3 -0.2113838195800781 7 Unmodified _AEELFARKF_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 29.081581746732265 0.1611639662936252 2 E{I|L}{M(Oxidation (M))|F}A 4 5 33.175 0.0 0.0 2.9899 0.0 0.0 200.0798832949021 446.2519930475219 646.331876342424 0.0 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 + E{I|L}{M(Oxidation (M))|F}A 2.9899 + + 192 + 1 2.033 61433.7 1.0 4075 3480 7550 DOHH2_400M_050219_2,7557 DOHH2_400M_050219_2,7557,AEELFARKF False True EDSPSYVKW 41.305431 555.801074206829 542487.375 7550.0 ENSG00000153147|ENST00000283131|SMARCA5 1.1766138523817062 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7558 41.316 622.0 378280.0 25 0 36413.0 + 11305 GEVLISRVY 9 174 518.2951676639102 1034.5757823946203 2 518.2961303591728 MULTI CID FTMS 0 0 0 7550 102979.796875 0.1084986627286919 -2 0.1752967834472656 8 Unmodified _GEVLISRVY_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 59.36838082759317 0.0264317782606298 2 {[DA]|[EG]}V{I|L}{I|L}SRVY 9 0 + 78.967 0.0 0.0 7.6328 7.6328 95.118 0.0 0.0 0.0 33.2332484928007 14.458909803095892 14.458909803095892 17.971062485323515 0 2.1549471895720984 1.5228787452803376 0.3494850021680094 0.2742275032520141 + + {[DA]|[EG]}V{I|L}{I|L}SRVY;WV{I|L}{I|L}S[VG]VY;{[DA]|[EG]}V{I|L}TVRVY;{[DA]|[EG]}{I|L}VTVRVY;{[DA]|[EG]}V{I|L}{I|L}S[{I|L}P][HA];WV{I|L}{I|L}S[{I|L}T]{[CT]|[{M(Oxidation (M))|F}G]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VVWVY;{NN|[MP]|[D{I|L}]|[EV]}G{I|L}TVRVY;{[SA]|[TG]}V{I|L}VVWVY;{[QN]|[E{I|L}]|[KN]}KVVWVY 7.6328;5.8957;5.8775;4.8123;4.661;3.6711;3.4706;3.421;3.2131;2.8969 +;-;-;-;-;-;-;-;-;- + 1470 + 1 2.033 175720.8 1.0 4076 3480 7550 DOHH2_400M_050219_2,7558 DOHH2_400M_050219_2,7558,GEVLISRVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7559 41.33 800.0 128380.0 25 0 12380.0 + 12293 GSDFYSMHY 9 129 553.7162369791815 1105.417921025163 2 553.7159911990166 MULTI CID FTMS 0 0 0 7550 81050.59375 0.4813597868936949 3 -0.2113838195800781 9 Unmodified _GSDFYSMHY_ ENSG00000196704|ENST00000359904|AMZ2;ENST00000584350.1_1_17:66246608-66253107:+|nuORF;nc|ENSG00000196704|Q86W34-5|AMZ2 48.345845343767074 0.0439967357579942 2 [SG]D{M(Oxidation (M))|F}YSMHY 9 0 + 64.444 0.0 0.0 5.8299 5.8299 77.163 0.0 0.0 0.0 16.733715863610243 1.383026981662809 1.383026981662809 1.383026981662809 0 0.6022338482433752 0.958607314841775 0.3252574989159953 0.0 + + [SG]D{M(Oxidation (M))|F}YSMHY;[SG]D{M(Oxidation (M))|F}YSMNW;[SG]D{M(Oxidation (M))|F}YSMYH;[SG]D{M(Oxidation (M))|F}YSMGGW;[SG]D{M(Oxidation (M))|F}Y{[C(Carbamidomethyl (C))G]|[NC]}[PG]{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}Y[QA][DG]{M(Oxidation (M))|F} 5.8299;5.7047;5.3106;4.8717;2.1956;0.95876 +;-;-;-;-;- + 310 + 1 2.033 88359.2 0.5 4077 3480 7550 DOHH2_400M_050219_2,7559 DOHH2_400M_050219_2,7559,GSDFYSMHY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7560 41.331 40.0 1271300.0 25 0 66108.0 -1 RCHRRRRRCCC 11 68 866.9070133939276 1731.7994738546552 2 866.9153930544853 MULTI CID FTMS 0 0 0 7550 1044216.375 0.1290094044305424 -10 0.8633384704589844 10 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 2 [MN]P[WR]ADQK[WC(Carbamidomethyl (C))]{I|L}Q 13 -1 + 61.948 0.0 0.0 3.5771 3.5771 50.365 0.0 0.0 0.0 42.739600907670656 12.104738332459595 12.104738332459595 0.0 0 0.4247425010840047 1.5228787452803376 0.0 1.1549471895720984 [MN]P[WR]ADQK[WC(Carbamidomethyl (C))]{I|L}Q;[MN]P{NN|[MP]|[D{I|L}]|[EV]}NWQK[WC(Carbamidomethyl (C))]{I|L}Q;[MN]PN[W{I|L}]DQK[WC(Carbamidomethyl (C))]{I|L}Q;[MN]P[WR]WQK[WC(Carbamidomethyl (C))]{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[RH]ADQK[WC(Carbamidomethyl (C))]{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L}[HN]DQK[WC(Carbamidomethyl (C))]{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[RH]WQK[WC(Carbamidomethyl (C))]{I|L}Q 3.5771;3.5771;3.4033;3.1935;2.4525;2.1048;2.0689 -;-;-;-;-;-;- 296 + 1 2.033 40433.0 1.0 4078 3480 7550 DOHH2_400M_050219_2,7560 DOHH2_400M_050219_2,7560,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7562 41.341 376.0 233180.0 25 0 24316.0 + 21022 LNVVRDRG 8 131 464.7702889225754 927.5260249119508 2 464.7700378298759 MULTI CID FTMS 0 0 0 7561 111106.4296875 0.4034789591862071 4 -0.2649803161621094 1 Unmodified _LNVVRDRG_ REV__ENSG00000065183|ENST00000349139|WDR3 4.75600775471527 0.7954636275367004 2 {I|L} 1 -1 9.6777 0.0 0.0 1.0434 0.0 0.0 796.431281114879 0.0 796.431281114879 0.0 -3.254114960141808 -3.254114960141808 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0434 + + 22 + 1 2.033 71994.0 1.0 4079 3481 7561 DOHH2_400M_050219_2,7562 DOHH2_400M_050219_2,7562,LNVVRDRG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7563 41.344 176.0 272970.0 25 0 25942.0 + 29134 QETPPQVTF 9 80 523.7610451005128 1045.5075372678257 2 523.7614013552666 MULTI CID FTMS 0 0 0 7561 126988.140625 0.602133639920684 -2 0.1127204895019531 2 Unmodified _QETPPQVTF_ ENSG00000159753|ENST00000334583|CARMIL2;nc|ENSG00000159753|Q6F5E8-2|CARMIL2 27.628801355627647 0.1796483985696185 2 [QP]PTEQV[{M(Oxidation (M))|F}T] 9 4 + 38.567 0.0 0.0 3.6888 3.6888 74.435 0.0 0.0 0.0 0.7378621416091917 23.96259381945641 0.7378621416091917 6.020599913279625 0 0.5 0.0 0.8494850021680094 0.0 [QP]PTEQV[{M(Oxidation (M))|F}T];{[HG]|PP}QTEQV[{M(Oxidation (M))|F}T];[QP]PVT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}T];[QP]PTE[AG]V[{M(Oxidation (M))|F}T];{[HG]|PP}QVQMV[{M(Oxidation (M))|F}T];[QP]PTV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}T];[QP]VPT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}T];{[HG]|PP}QVT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}T];{[HG]|PP}QTE[AG]V[{M(Oxidation (M))|F}T];{[HG]|PP}[AG]TEQV[{M(Oxidation (M))|F}T] 3.6888;3.1129;2.8092;2.8081;2.6641;2.3529;2.2334;2.2334;2.2322;2.2322 -;-;-;-;-;-;-;-;-;- 282 1 2.033 43686.5 1.0 4080 3481 7561 DOHH2_400M_050219_2,7563 DOHH2_400M_050219_2,7563,QETPPQVTF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7564 41.358 800.0 139300.0 25 0 8323.5 -1 0 112 873.9148948428956 1745.815236752591 2 874.4138061404228 MULTI CID FTMS 0 0 0 7561 116793.2265625 0.0320549605835603 -11 0.920318603515625 3 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PN{I|L}NA{[QN]|[E{I|L}]|[KN]}{I|L}V[C(Carbamidomethyl (C))C]{I|L}Q 15 -1 + 53.941 0.0 0.0 3.0897 3.0897 69.853 0.0 0.0 0.0 29.125842504886524 4.493559221610965 4.493559221610965 3.3226467981605623 0 0.0 0.0 0.0 1.1421590589602533 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PN{I|L}NA{[QN]|[E{I|L}]|[KN]}{I|L}V[C(Carbamidomethyl (C))C]{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N{I|L}NA{[QN]|[E{I|L}]|[KN]}{I|L}V[C(Carbamidomethyl (C))C]{I|L}Q;[NP]{I|L}[C(Carbamidomethyl (C))H]{I|L}{[QN]|[E{I|L}]|[KN]}AN{I|L}NP{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PN{I|L}NA[Q{I|L}]NV[C(Carbamidomethyl (C))C]{I|L}Q;[NP]{I|L}DT{[HG]|PP}{[QN]|[E{I|L}]|[KN]}AN{I|L}NP{[QN]|[E{I|L}]|[KN]};[MN][YN]V{I|L}{[QN]|[E{I|L}]|[KN]}AN{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N[C(Carbamidomethyl (C))H][Q{I|L}]AN{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}NA[QP]{[QN]|[E{I|L}]|[KN]}AN{I|L}NA[HM];[NP]{I|L}DT{[HG]|PP}{[QN]|[E{I|L}]|[KN]}AN{I|L}N{I|L}[EP];[NP]{I|L}[C(Carbamidomethyl (C))H]N[Q{I|L}]AN{I|L}NP{[QN]|[E{I|L}]|[KN]} 3.0897;2.8994;2.7369;2.5724;2.5656;2.5268;2.4929;2.3757;2.3753;2.2196 -;-;-;-;-;-;-;-;-;- 1200 + 1 2.033 77548.8 0.5799999833106995 4081 3481 7561 DOHH2_400M_050219_2,7564 DOHH2_400M_050219_2,7564, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7565 41.37 698.0 212720.0 25 0 16156.0 + 31826 RTDGKVFQF 9 154 549.2904306864735 1096.566308439747 2 549.2911254763603 MULTI CID FTMS 0 0 0 7561 97645.1875 0.3193875813355123 -2 0.1127204895019531 4 Unmodified _RTDGKVFQF_ ENSG00000114391|ENST00000394077|RPL24 47.594388314883695 0.0456443387682827 2 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PGKV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 9 3 + 62.167 0.0 0.0 5.6693 5.6693 86.128 0.0 0.0 0.0 9.06534518921275 37.70332985526564 9.06534518921275 9.208187539523747 0 1.066901560044258 0.0 0.0 0.9436726795685342 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PGKV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PGKV{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}RGKV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[ET]|[MV]}AAGKV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}RGKV{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][{I|L}A]PV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}RGKV[RH]E;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PKK{M(Oxidation (M))|F}{[CA]|SS}E;{[ET]|[MV]}AAGKV{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KG]PV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 5.6693;4.8295;4.68;3.9043;3.8402;3.4877;3.3569;3.0714;3.0686;3.0277 -;-;-;-;-;-;-;-;-;- 824 1 2.033 116756.2 1.0 4082 3481 7561 DOHH2_400M_050219_2,7565 DOHH2_400M_050219_2,7565,RTDGKVFQF True True RTDGKVFQF 41.370025 549.29112547636 4825049.0 7561.0 ENSG00000114391|ENST00000394077|RPL24 4.77760108311971 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7566 41.384 800.0 140760.0 25 0 12563.0 + 35706 SVGKPLYL 8 125 438.7639177352856 875.5132825373712 2 438.7636291384697 MULTI CID FTMS 0 0 0 7561 93460.1875 1.0 0 0.0 5 Unmodified _SVGKPLYL_ ENSG00000143624|ENST00000318967|INTS3;nc|ENSG00000143624|Q68E01-3|INTS3;nc|ENSG00000143624|Q68E01-4|INTS3;nc|ENSG00000143624|Q68E01|INTS3 24.67388899826682 0.525179942228231 2 [VS][KG][{I|L}P]Y{I|L} 8 0 + 38.689 0.0 0.0 4.4191 4.4191 76.781 0.0 0.0 0.0 17.71575216895016 8.650202880515643 8.650202880515643 6.00833760139686 0 0.805462187404089 2.0 0.0 0.0 + + [VS][KG][{I|L}P]Y{I|L};[VS][KG][Y{I|L}]P{I|L};[VS][KG][Y{I|L}]{I|L}P;[VS][KG]KK{[ET]|[MV]};[{I|L}P][KG][VS]Y{I|L} 4.4191;3.7328;2.7856;1.9781;1.2604 +;-;-;-;- + 147 + 1 2.033 95406.3 0.4199999868869781 4083 3481 7561 DOHH2_400M_050219_2,7566 DOHH2_400M_050219_2,7566,SVGKPLYL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7567 41.398 800.0 196450.0 25 0 28930.0 + 5182 DINTDGAVNF 10 174 533.2461959662949 1064.4778389993896 2 533.2468749880791 MULTI CID FTMS 0 0 0 7561 89925.703125 0.857119688131922 -2 0.1127204895019531 6 Unmodified _DINTDGAVNF_ ENSG00000143546|ENST00000368733|S100A8 39.94969957227396 0.1580982266129622 2 {NN|[MP]|[D{I|L}]|[EV]}NTNE 6 5 41.904 0.0 0.0 3.9365 0.0 0.0 0.0 375.1691365134989 375.1691365134989 14.918963919121992 0.0 0.0 0.0 0 0.0 2.0 0.6237125054200234 0.7742275032520141 {NN|[MP]|[D{I|L}]|[EV]}NTNE 3.9365 - 1431 1 2.033 127040.4 0.4900000095367431 4084 3481 7561 DOHH2_400M_050219_2,7567 DOHH2_400M_050219_2,7567,DINTDGAVNF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7568 41.403 266.0 389320.0 25 0 92226.0 + 29911 QSEDFATYY 9 118 562.2323529029718 1122.4501528727435 2 562.2325317263603 MULTI CID FTMS 0 0 0 7561 195502.8125 0.5140992738041344 -1 0.0569801330566406 7 Unmodified _QSEDFATYY_ nc|ENSG00000239819|A0A087WSZ0|IGKV1D-8;nc|ENSG00000240671|A0A0C4DH67|IGKV1-8 65.23502041540118 0.0231836506122253 2 {[ES]|[DT]|[{I|L}C]}QD{M(Oxidation (M))|F}A 6 5 35.742 0.0 0.0 3.1843 0.0 0.0 0.0 442.162163941356 442.162163941356 11.194028404633151 0.0 0.0 0.0 0 0.0 0.0 1.860924374808178 1.1549471895720984 {[ES]|[DT]|[{I|L}C]}QD{M(Oxidation (M))|F}A 3.1843 - 1291 1 2.033 82681.4 1.0 4085 3481 7561 DOHH2_400M_050219_2,7568 DOHH2_400M_050219_2,7568,QSEDFATYY True True QSEDFATYY 41.40261 562.23253172636 6074531.5 7561.0 nc|ENSG00000240671|A0A0C4DH67|IGKV1-8;;nc|ENSG00000239819|A0A087WSZ0|IGKV1D-8 6.811203320821126 2.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 7569 41.416 708.0 210970.0 25 0 16623.0 + 17031 KKKKKKVKKI 10 162 419.3153467747704 0 419.3147155642509 PEAK CID FTMS 0 0 0 7561 125442.9765625 0.3218657624990959 695 -15.98137664794922 8 Unmodified _KKKKKKVKKI_ REV__ENSG00000187257|ENST00000334955|RSBN1L 0.0 0.3961065659209837 2 E 1 -1 6.3515 0.0 0.0 0.75919 0.0 0.0 637.4949533378236 67.05609308414296 704.5510464219666 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1747425010840047 0.0 E 0.75919 - 19 + 1 2.033 120127.4 1.0 4086 3481 7561 DOHH2_400M_050219_2,7569 DOHH2_400M_050219_2,7569,KKKKKKVKKI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7570 41.43 800.0 59224.0 25 0 3901.2 -1 0 81 1009.1042613628414 3024.290954688724 3 1009.437976062298 MULTI CID FTMS 0 0 0 7561 70599.40625 1.0 0 0.0 9 2 ET 2 -1 15.573 0.0 0.0 0.51494 0.0 0.0 2492.1069469756367 299.0703524225219 2791.1772993981585 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 ET 0.51494 - 60 + 1 2.033 36770.8 0.3499999940395355 4087 3481 7561 DOHH2_400M_050219_2,7570 DOHH2_400M_050219_2,7570, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7572 41.435 70.0 770210.0 25 0 136080.0 + 37685 TLNEKLTAL 9 82 501.7947483099927 1001.5749436867852 2 501.7950317263603 MULTI CID FTMS 0 0 0 7571 612150.75 0.1451609460977269 6 -0.2679939270019531 1 Unmodified _TLNEKLTAL_ ENSG00000254999|ENST00000530758|BRK1;nc|ENSG00000254999|Q8WUW1-2|BRK1 38.17557092003332 0.0854718145212029 2 [{I|L}T][VG]NTA{I|L}[{I|L}T] 10 5 + 50.207 0.0 0.0 5.0128 5.0128 79.352 0.0 0.0 0.0 12.345143534448011 11.593020841151612 11.593020841151612 6.020599913279625 0 0.5 2.0 0.7302046884880937 0.0 [{I|L}T][VG]NTA{I|L}[{I|L}T];[{I|L}T][VG]NT{I|L}A[{I|L}T];[{I|L}T][VG]GGTA{I|L}[{I|L}T];{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}TA{I|L}[{I|L}T];[{I|L}T][VG]GGT{I|L}A[{I|L}T];[TA][QA]{I|L}TA{I|L}[{I|L}T];{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}T{I|L}A[{I|L}T];[{I|L}T]NA[VS]A{I|L}[{I|L}T];[TA][QA]{I|L}T{I|L}A[{I|L}T];[TA]VVNTA{I|L}[{I|L}T] 5.0128;4.4117;4.0978;3.7608;3.4967;3.1845;3.1597;2.9816;2.5834;2.5592 -;-;-;-;-;-;-;-;-;- 411 1 2.044 46410.4 1.0 4088 3482 7571 DOHH2_400M_050219_2,7572 DOHH2_400M_050219_2,7572,TLNEKLTAL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7573 41.44 242.0 433890.0 25 0 18563.0 + -1 ILGPPGSVY 9 91 902.9182897976564 1803.8220266621124 2 902.9191161990166 MULTI CID FTMS 0 0 0 7571 326000.4375 0.2340427565389645 4 -0.1822433471679687 2 ENSG00000182247|ENST00000396703|UBE2E2;nc|ENSG00000170142|P51965-3|UBE2E1;nc|ENSG00000170142|P51965-2|UBE2E1;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000170035|ENST00000410062|UBE2E3;ENST00000493707.1_1_3:23907959-23932094:+|nuORF 2 [MN]PN{I|L}NEEQRG 11 -1 88.326 0.0 0.0 4.8966 0.0 0.0 0.0 518.2265719049436 518.2265719049436 53.09231733010141 0.0 0.0 0.0 0 1.055462187404089 1.5228787452803376 0.4247425010840047 1.1989700043360187 [MN]PN{I|L}NEEQRG 4.8966 - 1541 + 1 2.044 74762.2 1.0 4089 3482 7571 DOHH2_400M_050219_2,7573 DOHH2_400M_050219_2,7573, False False ILGPPGSVY 41.439999 902.919116199017 3160357.0 7571.0 ENSG00000182247|ENST00000396703|UBE2E2;;nc|ENSG00000170142|P51965-3|UBE2E1;;nc|ENSG00000170142|P51965-2|UBE2E1;;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;;ENSG00000170142|ENST00000306627|UBE2E1;;ENSG00000170035|ENST00000410062|UBE2E3;;ENST00000493707.1_1_3:23907959-23932094:+|nuORF 5.2747117678324384 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7574 41.444 222.0 322130.0 25 0 15560.0 + 2538 ASEFGNHYLY 10 103 600.769741589485 1199.5249302457698 2 600.7700683474541 MULTI CID FTMS 0 0 0 7571 256763.015625 0.8676578859831144 1 -0.0557975769042968 3 Unmodified _ASEFGNHYLY_ ENSG00000189091|ENST00000302516|SF3B3 60.07390631473393 0.0363923079357811 2 {[SA]|[TG]}E[PS]{M(Oxidation (M))|F}TW{I|L}Y 10 5 + 56.132 0.0 0.0 4.6795 4.6795 77.867 0.0 0.0 0.0 8.520599913279625 16.5051499783199 8.520599913279625 6.020599913279625 0 1.3494850021680094 1.3010299956639813 0.7742275032520141 0.0 {[SA]|[TG]}E[PS]{M(Oxidation (M))|F}TW{I|L}Y;{[SA]|[TG]}E[VG]{M(Oxidation (M))|F}EW{I|L}Y;{[SA]|[TG]}E[PS]{M(Oxidation (M))|F}{I|L}{[WT]|[RM]}Y;{[SA]|[TG]}E{M(Oxidation (M))|F}REW{I|L}Y;{[ES]|[DT]|[{I|L}C]}A[PS]{M(Oxidation (M))|F}TW{I|L}Y;{[ES]|[DT]|[{I|L}C]}A[PS]{M(Oxidation (M))|F}{I|L}E{[SA]|[TG]}Y;{[SA]|[TG]}E[PS]{I|L}{M(Oxidation (M))|F}{[WT]|[RM]}Y;{[ES]|[DT]|[{I|L}C]}A[PS]{M(Oxidation (M))|F}E{[SA]|[TG]}{I|L}Y;{[ES]|[DT]|[{I|L}C]}A[VG]{M(Oxidation (M))|F}EW{I|L}Y;{[ES]|[DT]|[{I|L}C]}A[PS]{M(Oxidation (M))|F}E{I|L}{[SA]|[TG]}Y 4.6795;4.1776;4.1224;4.0865;3.9692;3.7497;3.7246;3.706;3.4672;3.4551 -;-;-;-;-;-;-;-;-;- 1317 1 2.044 54801.4 1.0 4090 3482 7571 DOHH2_400M_050219_2,7574 DOHH2_400M_050219_2,7574,ASEFGNHYLY True True ASEFGNHYLY 41.444195 600.770068347454 2444396.25 7571.0 ENSG00000189091|ENST00000302516|SF3B3 6.813775062561035 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7575 41.458 800.0 210820.0 25 0 7918.1 -1 0 144 917.4294408659848 1832.8443287987693 2 917.4322387576104 MULTI CID FTMS 0 0 0 7571 229115.5625 0.2098740474840985 6 -0.2679939270019531 4 2 [MN]PN{I|L}NEAQR 10 -1 87.179 0.0 0.0 4.7565 0.0 0.0 0.0 662.2786959283811 662.2786959283811 -7.808240935216958 0.0 -7.808240935216958 0.0 0 1.426935982160881 1.5228787452803376 0.3252574989159953 1.1688265215345564 [MN]PN{I|L}NEAQR 4.7565 - 18138 + 1 2.044 112682.0 0.8500000238418579 4091 3482 7571 DOHH2_400M_050219_2,7575 DOHH2_400M_050219_2,7575, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7576 41.463 289.0 246850.0 25 0 26875.0 + 37253 TIMPKDIQL 9 114 537.7969229930856 1073.579293052971 2 537.7971679568291 MULTI CID FTMS 0 0 0 7571 119419.7265625 0.6698958482977213 -1 0.0986061096191406 5 Oxidation (M) _TIM(Oxidation (M))PKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 45.69961567697781 0.0497987121815769 2 [{I|L}T]{M(Oxidation (M))|F} 3 6 40.19 0.0 0.0 3.7435 0.0 0.0 0.0 709.3892655473647 709.3892655473647 15.3747002940198 0.0 0.0 0.0 0 1.0 2.0 0.2742275032520141 0.0 + [{I|L}T]{M(Oxidation (M))|F} 3.7435 + + 414 1 2.044 59803.5 1.0 4092 3482 7571 DOHH2_400M_050219_2,7576 DOHH2_400M_050219_2,7576,TIMPKDIQL True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7577 41.477 800.0 236560.0 25 0 8003.9 + + -1 YSAPPGDPLSTNY 13 177 691.8090082270999 1381.6034635209996 2 691.8073608279228 MULTI CID FTMS 0 0 0 7571 80043.1484375 0.8138636037407059 -5 0.4290924072265625 6 Oxidation (M) _DFKAYIM(Oxidation (M))MQGY_ nc|ENSG00000082641|Q14494-2|NFE2L1;ENSG00000082641|ENST00000362042|NFE2L1 5.296884461304476 0.8501568894076437 2 [PG]DP{I|L}PSV 8 -1 22.447 0.0 0.0 1.6247 0.0 0.0 0.0 616.2026205857059 616.2026205857059 1.5834013317710252 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3054621874040891 0.0 [PG]DP{I|L}PSV 1.6247 - 2706 1 2.044 127444.5 0.5699999928474426 4093 3482 7571 DOHH2_400M_050219_2,7577 DOHH2_400M_050219_2,7577,DFKAYIMMQGY False False YSAPPGDPLSTNY 41.477188 691.807360827923 0.0 7571.0 nc|ENSG00000082641|Q14494-2|NFE2L1;;ENSG00000082641|ENST00000362042|NFE2L1 4.5478207270304365 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7578 41.48 129.0 418490.0 25 0 35190.0 + 7054 EELGFRPEY 9 77 570.2716954590559 1138.5288379849117 2 570.2720214724541 MULTI CID FTMS 0 0 0 7571 285537.1875 0.1176817074937411 5 -0.2315521240234375 7 Unmodified _EELGFRPEY_ ENSG00000143799|ENST00000366794|PARP1 26.268140514670165 0.1969607489560049 2 EE{I|L}G{M(Oxidation (M))|F}R[EP]Y 9 0 + 48.311 0.0 0.0 4.2433 4.2433 74.957 0.0 0.0 0.0 35.2119811855394 4.181212380090216 4.181212380090216 4.771212547196626 0 0.5 1.5228787452803376 0.0 0.0 + + EE{I|L}G{M(Oxidation (M))|F}R[EP]Y;EE{I|L}G{M(Oxidation (M))|F}W[VP]Y;[EP]{[NV]|[RG]}[RD]G{I|L}[HC];[DP]{[QV]|[N{I|L}]|[RA]|[KV]}[RD]G{I|L}[HC];[RP]{[DA]|[EG]}[RD]G{I|L}[HC];[EP][QA][HC]{I|L}RW 4.2433;3.8242;0.89261;0.6277;0.43442;0.077341 +;-;-;-;-;- + 119 + 1 2.044 48725.5 1.0 4094 3482 7571 DOHH2_400M_050219_2,7578 DOHH2_400M_050219_2,7578,EELGFRPEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7579 41.486 323.0 239510.0 25 0 8723.9 -1 0 116 910.4217595233204 1818.8289661134409 2 910.9214965701104 MULTI CID FTMS 0 0 0 7571 205604.78125 0.0757109218197963 8 -0.4628524780273437 8 2 [NP]{I|L}NQ[PG]TQDAN{I|L}[DP][EP] 17 -1 + 60.471 0.0 0.0 3.3247 3.3247 81.133 0.0 0.0 0.0 9.138318225791965 38.25244982325314 9.138318225791965 19.58607314841776 0 0.3807196863200844 0.958607314841775 0.0 0.9361818737241736 [NP]{I|L}NQ[PG]TQDAN{I|L}[DP][EP];{[QV]|[N{I|L}]|[RA]|[KV]}PNQ[PG]TQDAN{I|L}[DP][EP] 3.3247;2.2479 -;- 1442 1 2.044 55191.1 1.0 4095 3482 7571 DOHH2_400M_050219_2,7579 DOHH2_400M_050219_2,7579, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7581 41.491 60.0 1143900.0 25 0 92200.0 6590 EAPNQEKVSDY 11 97 640.2936793341825 1278.5728057351648 2 640.2941772341728 MULTI CID FTMS 0 0 0 7580 670634.5625 0.5966421370360131 2 -0.1105766296386718 1 Unmodified _EAPNQEKVSDY_ ENSG00000132646|ENST00000379143|PCNA 29.84058131909904 0.3915366693542702 2 {[YD]|[{M(Oxidation (M))|F}M]}[YV]{[QN]|[E{I|L}]|[KN]}{I|L}SDY 10 7 + 68.905 0.0 0.0 5.3892 5.3892 88.343 0.0 0.0 0.0 4.906812209816636 47.81234684152075 4.906812209816636 18.82068444291761 0 1.424742501084005 1.5228787452803376 1.4802046884880935 0.2742275032520141 {[YD]|[{M(Oxidation (M))|F}M]}[YV]{[QN]|[E{I|L}]|[KN]}{I|L}SDY;{[YD]|[{M(Oxidation (M))|F}M]}[YV][{I|L}T]{I|L}DDY;{[YD]|[{M(Oxidation (M))|F}M]}[YV][{I|L}T]PMDY 5.3892;3.9172;3.4917 -;-;- 158 1 2.044 55517.2 1.0 4096 3483 7580 DOHH2_400M_050219_2,7581 DOHH2_400M_050219_2,7581,EAPNQEKVSDY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7582 41.492 80.0 727120.0 25 0 132700.0 -1 0 83 479.277350532607 478.270074066007 1 479.2775146365166 MULTI CID FTMS 0 0 0 7580 546141.0 0.5543040275497143 6 -0.3200645446777344 2 2 {I|L} 1 -1 10.0 0.0 0.0 2.0909 0.0 0.0 347.1751624222554 0.0 347.1751624222554 0.0 8.740940135031003 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.0909 - 2 + 1 2.044 49600.5 1.0 4097 3483 7580 DOHH2_400M_050219_2,7582 DOHH2_400M_050219_2,7582, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7583 41.502 540.0 384990.0 25 0 27749.0 + 13330 HLDGQPFLRY 10 164 623.3222821153229 1244.6300112974457 2 623.3220092654228 MULTI CID FTMS 0 0 0 7580 158403.09375 0.3821682573571871 -5 0.3866806030273437 3 Unmodified _HLDGQPFLRY_ ENSG00000204516|ENST00000252229|MICB;ENSG00000204520|ENST00000449934|MICA;nc|ENSG00000204516|Q29980-2|MICB 61.60191391372663 0.0323840705564037 2 H{I|L}DGQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}RY 10 0 + 81.157 0.0 0.0 6.5205 6.5205 88.382 0.0 0.0 0.0 67.14246308919897 5.049406363485858 5.049406363485858 9.164539485499262 0 1.610924374808178 2.0 0.0 0.8494850021680094 + + H{I|L}DGQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}RY;H{I|L}DG[AG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}RY;H{I|L}DGQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KKY;H{I|L}DGQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YR]{I|L};H{I|L}[TA]Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}RY;H{I|L}DK[WD]{I|L}RY;H{I|L}DGQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HV][VP];H{I|L}YH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KKY;H{I|L}DG[W{I|L}][VS]RY;H{I|L}D{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[VS]RY 6.5205;5.7842;5.3195;5.2707;4.9146;4.8997;4.8501;4.6953;4.1706;3.9754 +;-;-;-;-;-;-;-;-;- + 2729 + 1 2.044 150945.1 1.0 4098 3483 7580 DOHH2_400M_050219_2,7583 DOHH2_400M_050219_2,7583,HLDGQPFLRY True True HLDGQPFLRY 41.501828 623.322009265423 8917591.0 7580.0 nc|ENSG00000204516|Q29980-2|MICB;;ENSG00000204520|ENST00000449934|MICA;;ENSG00000204516|ENST00000252229|MICB 9.75257682800293 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7584 41.511 538.0 242560.0 25 0 34939.0 + 5185 DIQEKIQAL 9 137 529.2976658457321 1056.5807787582642 2 529.2990600466728 MULTI CID FTMS 0 0 0 7580 138896.3125 0.7376709274290653 -3 0.2113838195800781 4 Unmodified _DIQEKIQAL_ ENSG00000078674|ENST00000325083|PCM1;ENST00000518762.1_1_8:17817875-17822118:+|nuORF;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1 87.25819977447905 0.0157581688916699 2 {NN|[MP]|[D{I|L}]|[EV]}QEK{I|L}QA{I|L} 9 0 + 73.164 0.0 0.0 6.9246 6.9246 78.579 0.0 0.0 0.0 0.070673192912082 16.478174818886373 0.070673192912082 0.070673192912082 0 2.360924374808178 2.0 0.5554621874040891 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}QEK{I|L}QA{I|L};{[TV]|[{I|L}S]}GQ{I|L}AGA{I|L}D{I|L};{[TV]|[{I|L}S]}GQ{I|L}QA{I|L}D{I|L};{[TV]|[{I|L}S]}G{I|L}QAGA{I|L}D{I|L};{[TV]|[{I|L}S]}G{I|L}QQA{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}QE[{I|L}V]{I|L}D{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}AGA{I|L}D{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}QA{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}QEK{I|L}[AG]A{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]EK{I|L}QA{I|L} 6.9246;6.9179;6.8587;6.6825;6.6234;6.4749;6.2926;6.2376;6.0531;6.0531 +;-;-;-;-;-;-;-;-;- + 4605 1 2.044 103979.3 1.0 4099 3483 7580 DOHH2_400M_050219_2,7584 DOHH2_400M_050219_2,7584,DIQEKIQAL True True DIQEKIQAL 41.511299 529.299060046673 1228286.0 7580.0 ENSG00000078674|ENST00000325083|PCM1;;ENST00000518762.1_1_8:17817875-17822118:+|nuORF;;nc|ENSG00000078674|Q15154-4|PCM1;;nc|ENSG00000078674|Q15154-5|PCM1;;nc|ENSG00000078674|Q15154-2|PCM1 5.317985534667969 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7585 41.525 800.0 161720.0 25 0 6979.7 + 43244 WDRHSRVYWWQ 11 127 809.8849097125682 1617.7552664919365 2 809.8856078982353 MULTI CID FTMS 0 0 0 7580 128513.5 0.9022122830362967 -2 0.1544036865234375 5 Unmodified _WDRHSRVYWWQ_ REV__ENSG00000132821|ENST00000373461|VSTM2L;REV__nc|ENSG00000132821|Q96N03-2|VSTM2L 7.608950283845883 0.8392484121837455 2 MPN{I|L}NAD[RH][Y{M(Oxidation (M))|F}]{I|L}Q 13 -1 + 126.24 0.0 0.0 7.8031 7.8031 81.22 0.0 0.0 0.0 30.62147906748844 16.72686363731944 16.72686363731944 0.5237875363565649 0 2.9916440611282624 1.3979400086720375 0.0 1.7104093769761874 MPN{I|L}NAD[RH][Y{M(Oxidation (M))|F}]{I|L}Q;MPN{I|L}N[RH]DA[Y{M(Oxidation (M))|F}]{I|L}Q;MPN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;MPN{I|L}NA[H{I|L}]GT[Y{M(Oxidation (M))|F}]{I|L}Q;MPN{I|L}N[RH]W[Y{M(Oxidation (M))|F}]{I|L}Q;MPN{I|L}NW[RH][Y{M(Oxidation (M))|F}]{I|L}Q;MPN{I|L}NWQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;MPN{I|L}NA[H{I|L}]SA[Y{M(Oxidation (M))|F}]{I|L}Q;MPN{I|L}NAD[RH]H{I|L}[WD];MPN{I|L}N[RH]DAH{I|L}[WD] 7.8031;7.7708;7.7185;7.3164;7.1572;7.1572;7.071;6.9749;6.0213;5.8001 -;-;-;-;-;-;-;-;-;- 7503 + 1 2.044 89625.1 0.7099999785423279 4100 3483 7580 DOHH2_400M_050219_2,7585 DOHH2_400M_050219_2,7585,WDRHSRVYWWQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7586 41.531 347.0 210320.0 25 0 14120.0 + 2653 ATDIKITVY 9 117 512.2892887719402 1022.5640246106803 2 512.2899047732353 MULTI CID FTMS 0 0 0 7580 95010.140625 0.3038679055291559 3 -0.1264457702636718 6 Unmodified _ATDIKITVY_ ENSG00000124596|ENST00000424266|OARD1 45.69961567697781 0.0497987121815769 2 [TA]D{I|L}[K{I|L}]TVY 9 0 + 47.882 0.0 0.0 4.6826 4.6826 81.584 0.0 0.0 0.0 9.172709702397064 11.0827208845118 9.172709702397064 9.172709702397064 0 1.6822333069283657 1.3010299956639813 1.0356668758921828 0.0 + + [TA]D{I|L}[K{I|L}]TVY;[{I|L}T]KVEATVY;[K{I|L}]TVEATVY;{[TV]|[{I|L}S]}[K{I|L}]EATVY;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]TATVY;{[ET]|[MV]}G{I|L}[K{I|L}]TVY;[K{I|L}]{NN|[MP]|[D{I|L}]|[EV]}TATVY;{NN|[MP]|[D{I|L}]|[EV]}[TA][K{I|L}]TVY;{[QN]|[E{I|L}]|[KN]}[VG]{I|L}[KC]VY;{[QN]|[E{I|L}]|[KN]}{[SA]|[TG]}[K{I|L}]TVY 4.6826;3.7855;3.7814;2.763;2.5434;2.3151;1.7281;1.6653;1.6153;1.6153 +;-;-;-;-;-;-;-;-;- + 514 1 2.044 62057.4 1.0 4101 3483 7580 DOHH2_400M_050219_2,7586 DOHH2_400M_050219_2,7586,ATDIKITVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7588 41.538 150.0 601250.0 25 0 107930.0 + 32717 SEALPSRVSF 10 86 546.7878362349861 1091.561119536772 2 546.7880126833916 MULTI CID FTMS 0 0 0 7587 323368.8125 0.6862895194395823 2 -0.0807456970214843 1 Unmodified _SEALPSRVSF_ ENST00000455773.7_1_10:12238257-12240732:+|nuORF 43.9818466556824 0.1155196613165264 2 {[ES]|[DT]|[{I|L}C]}A{I|L}PN 6 5 42.664 0.0 0.0 3.9085 0.0 0.0 0.0 477.2482088678344 477.2482088678344 30.67410004652736 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}A{I|L}PN 3.9085 - 266 + 1 2.061 71877.4 1.0 4102 3484 7587 DOHH2_400M_050219_2,7588 DOHH2_400M_050219_2,7588,SEALPSRVSF True True SEALPSRVSF 41.538292 546.788012683392 3559332.25 7587.0 ENST00000455773.7_1_10:12238257-12240732:+|nuORF 5.743593374888103 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7589 41.541 147.0 506010.0 25 0 50725.0 + 1914 AMDVYKNLY 9 108 558.7732049825506 1115.5318570319012 2 558.7734863162041 MULTI CID FTMS 0 0 0 7587 290860.3125 0.5933683719707391 -2 0.1014976501464843 2 Unmodified _AMDVYKNLY_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 85.27202061508552 0.0162393975915471 2 {[DS]|[MA]|[CV]|TT}DV[TP]{I|L}NQQ 10 5 + 51.589 0.0 0.0 4.6246 4.6246 75.573 0.0 0.0 0.0 19.610819339696302 0.934619839528132 0.934619839528132 3.908324577398794 0 1.2059771852360797 1.6989700043360187 0.0 1.086696871556164 {[DS]|[MA]|[CV]|TT}DV[TP]{I|L}NQQ;{[DS]|[MA]|[CV]|TT}DVY{[QN]|[E{I|L}]|[KN]}{I|L}Y;{[DS]|[MA]|[CV]|TT}DV[TP]{I|L}GGQQ;[PG][KT][C(Carbamidomethyl (C))R]VD[PS];{[QV]|[N{I|L}]|[RA]|[KV]}[VG][C(Carbamidomethyl (C))R]VD[PS];{[DS]|[MA]|[CV]|TT}DV[KG][YG]{I|L}Y;{[DS]|[MA]|[CV]|TT}DV[TP]{I|L}{[DS]|[MA]|[CV]|TT}[PA];[DV]CVY{[QN]|[E{I|L}]|[KN]}{I|L}Y;{[DS]|[MA]|[CV]|TT}[VS]{I|L}[TP]VD[PS];{[DS]|[MA]|[CV]|TT}[KC]Y[QP]{I|L}Y 4.6246;4.2742;3.8031;3.4653;3.1867;3.1765;3.0577;2.9635;2.9153;2.7592 -;+;-;-;-;-;-;-;-;- + 705 + 1 2.061 61757.5 1.0 4103 3484 7587 DOHH2_400M_050219_2,7589 DOHH2_400M_050219_2,7589,AMDVYKNLY True True AMDVYKNLY 41.541242 558.773486316204 7103065.5 7587.0 ENST00000518442.5_1_8:109247181-109261015:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 8.006985664367676 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7590 41.544 118.0 701770.0 25 0 174110.0 + 38541 TSSKKSGL 8 94 404.2325049130775 806.450456892955 2 404.2325622439384 MULTI CID FTMS 0 0 0 7587 299957.5625 0.4386556555831947 -4 0.2570838928222656 3 Unmodified _TSSKKSGL_ REV__ENST00000511058.1_1_3:123385915-123401122:-|nuORF 7.910154910731844 0.7763180056447161 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.061 71178.9 1.0 4104 3484 7587 DOHH2_400M_050219_2,7590 DOHH2_400M_050219_2,7590,TSSKKSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7591 41.547 145.0 444770.0 25 0 59665.0 + 42478 VTHLISKFT 9 95 523.3033710117845 1044.592189090369 2 523.3032714724541 MULTI CID FTMS 0 0 0 7587 205011.625 0.6082316519154132 -6 0.4323806762695312 4 Unmodified _VTHLISKFT_ REV__ENSG00000149305|ENST00000260191|HTR3B;REV__nc|ENSG00000149305|O95264-2|HTR3B 7.910154910731844 0.6385446671287552 2 T{M(Oxidation (M))|F} 2 -1 20.701 0.0 0.0 1.9817 0.0 0.0 778.4655239065784 0.0 778.4655239065784 0.0 7.109862992977082 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 T{M(Oxidation (M))|F} 1.9817 - 56 + 1 2.061 57531.1 1.0 4105 3484 7587 DOHH2_400M_050219_2,7591 DOHH2_400M_050219_2,7591,VTHLISKFT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7592 41.56 800.0 169490.0 25 0 16515.0 + 40633 LVDIVKGTNSYY 12 147 686.3611119791241 1370.707671025048 2 686.3606445193291 MULTI CID FTMS 0 0 0 7587 149201.21875 1.0 0 0.0 5 Unmodified _VLDIFFEVLNY_ ENSG00000143799|ENST00000366794|PARP1 29.84058131909904 0.3915366693542702 2 [{I|L}V]D{I|L}V[MN]VK 9 6 67.884 0.0 0.0 4.9525 0.0 0.0 0.0 356.12177454166255 356.12177454166255 47.20545221231035 0.0 0.0 0.0 0 1.8494850021680087 1.6989700043360187 0.3807196863200844 0.75 [{I|L}V]D{I|L}V[MN]VK 4.9525 - 2891 + 1 2.061 96211.2 0.7300000190734863 4106 3484 7587 DOHH2_400M_050219_2,7592 DOHH2_400M_050219_2,7592,VLDIFFEVLNY False False LVDIVKGTNSYY 41.560444 686.360644519329 1248535.25 7587.0 ENSG00000143799|ENST00000366794|PARP1 6.951658725738525 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7593 41.574 800.0 165490.0 25 0 11770.0 + 5160 DIKKGILL 8 180 450.2997332893816 898.5849136455632 2 450.2995483279228 MULTI CID FTMS 0 0 0 7587 96316.328125 0.322554102061606 3 -0.1300544738769531 6 Unmodified _DIKKGILL_ ENSG00000104738|ENST00000649973|MCM4 36.12702656103203 0.299085846329477 2 D{I|L}K 3 5 39.838 0.0 0.0 4.4334 0.0 0.0 0.0 539.3572481744749 539.3572481744749 12.88241865052136 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + D{I|L}K 4.4334 + + 373 + 1 2.061 105089.0 0.4199999868869781 4107 3484 7587 DOHH2_400M_050219_2,7593 DOHH2_400M_050219_2,7593,DIKKGILL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7594 41.582 463.0 206380.0 25 0 24226.0 20575 LLNNRNSL 8 131 472.2701932251518 942.5258335171036 2 472.2705566287041 MULTI CID FTMS 0 0 0 7587 110736.375 0.3611496612429459 6 -0.3613548278808594 7 Unmodified _LLNNRNSL_ ENSG00000119946|ENST00000356713|CNNM1;nc|ENSG00000119946|Q9NRU3-2|CNNM1 14.581692164780916 0.6954967302934248 2 {I|L}{I|L}D 3 6 20.458 0.0 0.0 2.1705 0.0 0.0 0.0 598.3072720759504 598.3072720759504 2.670977955685529 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}D 2.1705 - 97 1 2.061 77457.1 1.0 4108 3484 7587 DOHH2_400M_050219_2,7594 DOHH2_400M_050219_2,7594,LLNNRNSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7595 41.596 800.0 152960.0 25 0 16726.0 + 31410 DMKIKVTDL 9 146 531.816389403685 1061.61822587417 2 531.8177978396416 MULTI CID FTMS 0 0 0 7587 87623.25 0.8120161679586472 -5 0.3128242492675781 8 Unmodified _RPHLAIKMP_ nc|ENSG00000085433|O94967-3|WDR47;nc|ENSG00000085433|O94967-4|WDR47;ENSG00000085433|ENST00000369962|WDR47;nc|ENSG00000085433|O94967-2|WDR47 10.073929032068715 0.563993802247229 2 {I|L}KMP 4 5 32.423 0.0 0.0 3.0541 0.0 0.0 574.3315296857437 0.0 574.3315296857437 0.0 21.313506577119625 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + {I|L}KMP 3.0541 + + 253 1 2.061 96139.9 0.4799999892711639 4109 3484 7587 DOHH2_400M_050219_2,7595 DOHH2_400M_050219_2,7595,RPHLAIKMP False False DMKIKVTDL 41.596296 531.817797839642 204909.90625 7587.0 nc|ENSG00000085433|O94967-3|WDR47;;nc|ENSG00000085433|O94967-4|WDR47;;ENSG00000085433|ENST00000369962|WDR47;;nc|ENSG00000085433|O94967-2|WDR47 2.8890053232510886 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7597 41.601 40.0 1029300.0 25 0 50652.0 -1 RCHRRRRRCCC 11 60 866.9070133939276 1731.7994738546552 2 866.9162475466728 MULTI CID FTMS 0 0 0 7596 875530.6875 0.1081688577762806 -5 0.32196044921875 1 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 2 [MN]PN{I|L}NADEK 10 -1 75.054 0.0 0.0 4.3339 0.0 0.0 0.0 602.2570894830686 602.2570894830686 57.39577516576787 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.805462187404089 [MN]PN{I|L}NADEK 4.3339 - 1049 + 1 2.061 34683.3 1.0 4110 3485 7596 DOHH2_400M_050219_2,7597 DOHH2_400M_050219_2,7597,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7598 41.603 81.0 904370.0 25 0 86813.0 + 11306 GEVLISRVY 9 78 518.2951676639102 1034.5757823946203 2 518.2955200076103 MULTI CID FTMS 0 0 0 7596 577585.25 0.6085390449243613 3 -0.1016197204589843 2 Unmodified _GEVLISRVY_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 47.594388314883695 0.0456443387682827 2 {[DA]|[EG]}V{I|L}{I|L}SRVY 9 0 + 80.367 0.0 0.0 7.7681 7.7681 95.136 0.0 0.0 0.0 56.14893351526163 12.403405327429413 12.403405327429413 16.989700043360187 0 1.924742501084005 1.6989700043360187 0.3494850021680094 0.0 + + {[DA]|[EG]}V{I|L}{I|L}SRVY;WV{I|L}{I|L}S[VG]VY;{[DA]|[EG]}V{I|L}{I|L}SP{I|L}[HA];{[DA]|[EG]}V{I|L}{I|L}[TP]V[HA];[{I|L}V]{[SA]|[TG]}VVWVY;{[SA]|[TG]}V{I|L}VVWVY;[{I|L}V]{[SA]|[TG]}[RD]{I|L}VY;{[SA]|[TG]}V{I|L}[RD]{I|L}VY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VVWVY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[RD]{I|L}VY 7.7681;6.1259;5.8533;4.5786;1.5034;1.4364;1.3332;1.2662;1.0586;0.88842 +;-;-;-;-;-;-;-;-;- + 208 + 1 2.061 62566.6 1.0 4111 3485 7596 DOHH2_400M_050219_2,7598 DOHH2_400M_050219_2,7598,GEVLISRVY True True GEVLISRVY 41.602948 518.29552000761 12081814.0 7596.0 ENST00000487958.5_1_3:183894781-183898060:+|nuORF;;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;;ENST00000484469.5_1_3:183894781-183895400:+|nuORF;;ENSG00000161203|ENST00000292807|AP2M1;;nc|ENSG00000161203|Q96CW1-2|AP2M1;;ENST00000466598.5_1_3:183894781-183896942:+|nuORF 5.802534898122151 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7599 41.606 158.0 554130.0 25 0 127300.0 + 27505 PKLDPAIA 8 107 412.7463797522136 823.4782065712271 2 412.7459899783134 MULTI CID FTMS 0 0 0 7596 288234.25 0.6699515260969966 -3 0.1663742065429687 3 Unmodified _PKLDPAIA_ REV__ENSG00000152939|ENST00000325631|MARVELD2;REV__nc|ENSG00000152939|Q8N4S9-2|MARVELD2;REV__nc|ENSG00000152939|Q8N4S9-3|MARVELD2 0.7936320650641473 0.8195151834710337 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.061 71832.9 1.0 4112 3485 7596 DOHH2_400M_050219_2,7599 DOHH2_400M_050219_2,7599,PKLDPAIA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7600 41.612 336.0 316160.0 25 0 25711.0 + 32730 SEAQVQKFL 9 133 525.2854858943257 1048.5564188554513 2 525.2860595583916 MULTI CID FTMS 0 0 0 7596 211418.6875 1.0 0 0.0 4 Unmodified _SEAQVQKFL_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 75.76082778847304 0.0188720312721366 2 {[ES]|[DT]|[{I|L}C]}AQVQK{M(Oxidation (M))|F}{I|L} 9 0 {[ES]|[DT]|[{I|L}C]} + + 56.639 7.0319 3.2544 5.4016 5.4016 56.993 0.0 0.0 0.0 0.0 27.95732670896497 0.0 0.0 0 1.9634679910804405 0.0 0.0 0.6861818737241735 + + {[ES]|[DT]|[{I|L}C]}AQVQK{M(Oxidation (M))|F}{I|L} 5.4016 + + 583 + 1 2.061 86840.5 1.0 4113 3485 7596 DOHH2_400M_050219_2,7600 DOHH2_400M_050219_2,7600,SEAQVQKFL True True SEAQVQKFL 41.612169 525.2869 1443548.0 7596.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 6.2436550458272295 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7602 41.623 378.0 329360.0 25 0 27919.0 + 31827 RTDGKVFQF 9 125 549.2904306864735 1096.566308439747 2 549.2905151247978 MULTI CID FTMS 0 0 0 7601 225142.15625 0.7364173348671126 3 -0.1936187744140625 1 Unmodified _RTDGKVFQF_ ENSG00000114391|ENST00000394077|RPL24 41.95555342248728 0.0647214845423414 2 {M(Oxidation (M))|F}VEV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 7 5 51.52 0.0 0.0 4.6983 0.0 0.0 182.1025404556928 0.0 182.1025404556928 0.0 27.80857585810999 0.0 0.0 0 1.2614393726401687 0.0 0.0 1.0356668758921828 {M(Oxidation (M))|F}VEV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 4.6983 - 1166 + 1 2.071 99481.2 1.0 4114 3486 7601 DOHH2_400M_050219_2,7602 DOHH2_400M_050219_2,7602,RTDGKVFQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7603 41.626 168.0 382350.0 25 0 62552.0 + 45303 YSESSQLLY 9 98 545.2584439253241 1088.502334917448 2 545.2582275271416 MULTI CID FTMS 0 0 0 7601 263560.9375 0.6397509977868763 -2 0.0807456970214843 2 Unmodified _YSESSQLLY_ ENSG00000101868|ENST00000379068|POLA1;nc|ENSG00000101868|P09884|POLA1 48.345845343767074 0.0439967357579942 2 Y{I|L}CC{I|L}Y 6 6 28.901 0.0 0.0 2.6551 0.0 0.0 312.16592241920426 0.0 312.16592241920426 0.0 14.318970284316435 0.0 0.0 0 0.5 0.0 0.0 0.0 Y{I|L}CC{I|L}Y 2.6551 - 201 + 1 2.071 52057.9 1.0 4115 3486 7601 DOHH2_400M_050219_2,7603 DOHH2_400M_050219_2,7603,YSESSQLLY True True YSESSQLLY 41.626131 545.258227527142 2977351.75 7601.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1 5.8666839599609375 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7604 41.637 650.0 244370.0 25 0 33189.0 + -1 SLLICQKI 8 150 487.79067362394665 973.5667943146932 2 487.7912475466728 MULTI CID FTMS 0 0 0 7601 177619.15625 0.3662690072739397 9 -0.677154541015625 3 Carbamidomethyl (C) _SLLIC(Carbamidomethyl (C))QKI_ REV__ENST00000492247.3_1_14:74522272-74524078:+|nuORF 9.347437153973935 0.7675937258251505 2 {I|L} 1 -1 10.969 0.0 0.0 1.1267 0.0 0.0 842.471684306684 0.0 842.471684306684 0.0 0.1316446936117454 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1267 + + 83 + 1 2.071 121809.8 1.0 4116 3486 7601 DOHH2_400M_050219_2,7604 DOHH2_400M_050219_2,7604,SLLICQKI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7605 41.648 581.0 281940.0 25 0 20794.0 + 214 AASKVMVEL 9 149 474.26525567837024 946.5159584235404 2 474.2652465701103 MULTI CID FTMS 0 0 0 7601 181902.9375 0.8302710853791962 -2 0.0807456970214843 4 Unmodified _AASKVMVEL_ ENSG00000149100|ENST00000531120|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF;nc|ENSG00000149100|Q7L2H7-2|EIF3M 51.629811660486645 0.0367964933207742 2 AASKVMVE{I|L} 9 0 + 54.251 0.0 0.0 5.7316 5.7316 88.551 0.0 0.0 0.0 14.663555400457687 11.0827208845118 11.0827208845118 12.83809673312028 0 1.218765315847925 1.5228787452803376 1.333839506110969 0.0 + + AASKVMVE{I|L};AASKVVME{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VM[VP]E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VN[QT]{I|L}{I|L};[KS]AAVMVE{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}T]MVE{I|L};[QT]KVMVE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VM[DP]{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MVPVE{I|L};[KS][Q{I|L}]MVE{I|L} 5.7316;4.3753;4.1824;4.1582;3.8147;3.7322;3.6485;3.3393;3.2418;3.1951 +;-;-;-;-;-;-;-;-;- + 484 1 2.071 128353.6 1.0 4117 3486 7601 DOHH2_400M_050219_2,7605 DOHH2_400M_050219_2,7605,AASKVMVEL True True AASKVMVEL 41.647633 474.26524657011 1377332.625 7601.0 nc|ENSG00000149100|Q7L2H7-2|EIF3M;;ENSG00000149100|ENST00000531120|EIF3M;;ENST00000524711.5_1_11:32608681-32615496:+|nuORF 4.730029424031575 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7606 41.661 800.0 214900.0 25 0 12719.0 -1 0 145 873.9148948428956 1745.815236752591 2 874.4113647341728 MULTI CID FTMS 0 0 0 7601 141354.125 0.0387959219773239 -6 0.33782958984375 5 2 [NP]{I|L}N[QP]AQAED{I|L}NP[EP] 16 -1 + 88.535 0.0 0.0 5.0713 5.0713 73.697 0.0 0.0 0.0 9.76403468139864 7.659167939666318 7.659167939666318 0.9568378181977976 0 0.0 1.0969100130080565 0.4247425010840047 1.2786596949921218 [NP]{I|L}N[QP]AQAED{I|L}NP[EP];[NP]{I|L}NM[RH]AED{I|L}NP[EP];[NP]{I|L}N[QP]AQADE{I|L}NP[EP];[NP]{I|L}NM[RH]ADE{I|L}NP[EP];[NP]{I|L}N[QP]AQAED{I|L}GGP[EP];[NP]{I|L}N[QP]A[AG]AED{I|L}NP[EP];[NP]{I|L}GG[QP]AQAED{I|L}NP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DEAQAC(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}GGM[RH]AED{I|L}NP[EP];[NP]{I|L}NM[RH]AED{I|L}GGP[EP] 5.0713;5.0165;4.6888;4.634;4.555;4.555;4.555;4.512;4.4992;4.4992 -;-;-;-;-;-;-;-;-;- 11533 1 2.071 114859.1 0.7300000190734863 4118 3486 7601 DOHH2_400M_050219_2,7606 DOHH2_400M_050219_2,7606, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7608 41.67 344.0 271970.0 25 0 56162.0 + 29912 QSEDFATYY 9 128 562.2323529029718 1122.4501528727435 2 562.2327758669853 MULTI CID FTMS 0 0 0 7607 152627.5625 0.4013534027483371 5 -0.4328269958496094 1 Unmodified _QSEDFATYY_ nc|ENSG00000239819|A0A087WSZ0|IGKV1D-8;nc|ENSG00000240671|A0A0C4DH67|IGKV1-8 52.268347100219714 0.0353964759249114 2 {M(Oxidation (M))|F}DYY 4 6 29.672 0.0 0.0 2.6435 0.0 0.0 516.2218720049125 0.0 516.2218720049125 0.0 12.544073720759291 0.0 0.0 0 0.0 0.0 0.6139829889124311 0.0 {M(Oxidation (M))|F}DYY 2.6435 - 925 + 1 2.071 74021.3 1.0 4119 3487 7607 DOHH2_400M_050219_2,7608 DOHH2_400M_050219_2,7608,QSEDFATYY True True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 7609 41.684 800.0 301930.0 25 0 23828.0 + 497 AEGPPRLAI 9 191 462.2690524520986 922.5235519709972 2 462.2691833376884 MULTI CID FTMS 0 0 0 7607 93390.296875 0.0645917055010756 -3 0.1300544738769531 2 Unmodified _AEGPPRLAI_ ENSG00000089693|ENST00000203630|MLF2 51.629811660486645 0.0367964933207742 2 [PG][RP]{I|L}AEA{I|L} 9 4 + 38.768 0.0 0.0 4.2024 4.2024 72.264 0.0 0.0 0.0 5.57074336417444 6.694247663943429 5.57074336417444 2.7422750325201406 0 0.6109243748081782 1.3010299956639813 0.3807196863200844 0.2742275032520141 [PG][RP]{I|L}AEA{I|L};[PG]{I|L}[RP]AEA{I|L};[PG][RP]{I|L}AE{I|L}A;[PG]{I|L}[RP]AE{I|L}A;[PG][RP]{[CP]|[EA]}{I|L}A{I|L};[PG][RP]{I|L}A{I|L}EA;[PG]{I|L}[RP]A{I|L}EA;[PG][RP]{[CP]|[EA]}{I|L}{I|L}A;{[TV]|[{I|L}S]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[Y{I|L}]A{I|L} 4.2024;3.9051;3.3541;3.0568;2.895;2.3698;2.0725;2.0467;0.21934 -;-;-;-;-;-;-;-;- 294 1 2.071 182240.5 0.4099999964237213 4120 3487 7607 DOHH2_400M_050219_2,7609 DOHH2_400M_050219_2,7609,AEGPPRLAI True True AEGPPRLAI 41.684073 462.269183337688 17626114.0 7607.0 ENSG00000089693|ENST00000203630|MLF2 4.74855915705363 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7610 41.698 800.0 138050.0 25 0 4804.8 -1 0 122 859.9174844078683 1717.8204158825365 2 859.9175903201103 MULTI CID FTMS 0 0 0 7607 77348.703125 0.927242446103738 -2 0.0651779174804687 3 2 [MN]PN{I|L}NWQAQD{M(Oxidation (M))|F}{I|L}Q 14 -1 + 97.473 0.0 0.0 5.6742 5.6742 74.6 0.0 0.0 0.0 16.156327985172368 11.937499767655794 11.937499767655794 0.2165251409206092 0 1.7231975075880328 1.5228787452803376 0.0 1.837180496500464 [MN]PN{I|L}NWQAQD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NADQ[WK]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NADQR{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NWQ[WK]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NW[AG]AQD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}GGWQAQD{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}NWQAQD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NWQR{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}NADQ[WK]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NAD[AG][WK]{M(Oxidation (M))|F}{I|L}Q 5.6742;5.6616;5.5253;5.2734;5.1474;5.1474;5.1474;5.1359;5.1348;5.1348 -;-;-;-;-;-;-;-;-;- 1592 + 1 2.071 73463.0 0.6299999952316284 4121 3487 7607 DOHH2_400M_050219_2,7610 DOHH2_400M_050219_2,7610, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7612 41.716 800.0 292540.0 25 0 11620.0 -1 0 170 902.9182897976564 1803.8220266621124 2 902.918994128704 MULTI CID FTMS 0 0 0 7611 195689.5625 0.1404897643224911 10 -0.7262954711914062 1 2 NMPN{I|L}NEEQ[RD]G{M(Oxidation (M))|F}{I|L}Q 15 -1 + 136.51 0.0 0.0 7.5679 7.5679 84.694 0.0 0.0 0.0 23.010299956639813 15.05323835235319 15.05323835235319 3.4556125503638384 0 2.5545970543767123 1.3979400086720375 0.6989700043360187 2.2017188504113845 NMPN{I|L}NEEQ[RD]G{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NE[C(Carbamidomethyl (C))R]GPD{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NE[KT]SGPD{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NE[QT]SGPD{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NEE[AG][RD]G{M(Oxidation (M))|F}{I|L}Q;NMPGG{I|L}NEEQ[RD]G{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}GGEEQ[RD]G{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NEE{[WT]|[RM]}RC(Carbamidomethyl (C)){I|L}Q;NMPN{I|L}NEERRMC(Carbamidomethyl (C)){I|L}Q;NMPN{I|L}NE[C(Carbamidomethyl (C))R][DP]G{M(Oxidation (M))|F}{I|L}Q 7.5679;7.3763;7.2476;7.2476;7.0672;7.0672;7.0672;6.7775;6.717;6.6953 -;-;-;-;-;-;-;-;-;- 39430 + 1 2.084 155331.6 0.800000011920929 4122 3488 7611 DOHH2_400M_050219_2,7612 DOHH2_400M_050219_2,7612, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7613 41.719 167.0 614350.0 25 0 90191.0 + 6962 EEIEGFRY 8 90 521.745635938059 1041.4767189429178 2 521.7458984255791 MULTI CID FTMS 0 0 0 7611 371381.3125 0.9068924101553436 -1 0.0364418029785156 2 Unmodified _EEIEGFRY_ ENSG00000136271|ENST00000258772|DDX56;ENST00000415758.1_1_7:44608571-44609680:-|nuORF;ENST00000421223.5_1_7:44605603-44609680:-|nuORF;ENST00000446987.5_1_7:44605603-44612175:-|nuORF;nc|ENSG00000136271|Q9NY93-2|DDX56 64.23631603340823 0.116217441302575 2 EE{I|L}EG{M(Oxidation (M))|F}RY 8 0 + 73.766 0.0 0.0 7.0828 7.0828 93.277 0.0 0.0 0.0 42.85764583011405 12.914930551903224 12.914930551903224 14.491129410415963 0 0.7887254899964358 1.6989700043360187 0.4247425010840047 0.3494850021680094 + + EE{I|L}EG{M(Oxidation (M))|F}RY;EE{I|L}{I|L}GE{I|L}[HC];{[QN]|[E{I|L}]|[KN]}E{I|L}GE{I|L}[HC];{[QN]|[E{I|L}]|[KN]}E{I|L}W{I|L}[HC];EEYV[PS]RY;{[QN]|[E{I|L}]|[KN]}[HQ]Y{I|L}[HC];{[TV]|[{I|L}S]}H{M(Oxidation (M))|F}GE{I|L}[HC];{[QN]|[E{I|L}]|[KN]}G[HA]Y{I|L}[HC];{[QN]|[E{I|L}]|[KN]}G{[QN]|[E{I|L}]|[KN]}E{I|L}[HC];{[QN]|[E{I|L}]|[KN]}[HQ]{I|L}Y[HC] 7.0828;5.6914;4.8457;4.2237;4.1666;3.801;3.7972;3.6116;3.5351;3.0234 +;-;-;-;-;-;-;-;-;- + 293 + 1 2.084 82727.1 1.0 4123 3488 7611 DOHH2_400M_050219_2,7613 DOHH2_400M_050219_2,7613,EEIEGFRY True True EEIEGFRY 41.71892 521.745898425579 2792344.25 7611.0 nc|ENSG00000136271|Q9NY93-2|DDX56;;ENST00000446987.5_1_7:44605603-44612175:-|nuORF;;ENSG00000136271|ENST00000258772|DDX56;;ENST00000421223.5_1_7:44605603-44609680:-|nuORF;;ENST00000415758.1_1_7:44608571-44609680:-|nuORF 5.046661694844564 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7614 41.723 202.0 472690.0 25 0 31172.0 + 11141 GEILRTEQW 9 110 566.2932352630266 1130.5719175928532 2 566.2936889529228 MULTI CID FTMS 0 0 0 7611 184107.59375 0.3122370881573366 -1 0.0364418029785156 3 Unmodified _GEILRTEQW_ ENSG00000104960|ENST00000391842|PTOV1;ENST00000596424.1_1_19:50360315-50362048:+|nuORF;nc|ENSG00000104960|Q86YD1-2|PTOV1;nc|ENSG00000104960|Q86YD1-3|PTOV1 53.4695610476455 0.0327627608358129 2 {[DA]|[EG]}{I|L}{I|L}RTEQW 9 0 + 55.205 0.0 0.0 4.8829 4.8829 76.759 0.0 0.0 0.0 19.366130211356065 35.05449080957064 19.366130211356065 3.979400086720375 0 2.0924778212679485 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}{I|L}{I|L}RTEQW;{[DA]|[EG]}{I|L}{I|L}S{I|L}WQW;{[DA]|[EG]}{I|L}{I|L}SQ{I|L}WW;{[DA]|[EG]}{I|L}{I|L}S{I|L}GAWW;{[DA]|[EG]}{I|L}{I|L}S{I|L}QWW;{[DA]|[EG]}{I|L}{I|L}SQW{I|L}W;{[DA]|[EG]}{I|L}{I|L}RTE[AG]W;{[DA]|[EG]}{I|L}{I|L}RTAW{[DA]|[EG]};{[DA]|[EG]}{I|L}{I|L}RTA{[DA]|[EG]}W;{[DA]|[EG]}{I|L}{I|L}S{I|L}W[AG]W 4.8829;4.5309;4.4881;4.2671;4.2218;4.1361;4.0684;3.7593;3.7593;3.7165 +;-;-;-;-;-;-;-;-;- + 562 1 2.084 76601.4 1.0 4124 3488 7611 DOHH2_400M_050219_2,7614 DOHH2_400M_050219_2,7614,GEILRTEQW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7615 41.733 603.0 265720.0 25 0 16938.0 + -1 ITDAYLDQY 9 155 551.2590142430912 550.2517377764912 1 551.2592651247978 MULTI CID FTMS 0 0 0 7611 165226.890625 0.9500958315004412 -1 0.0364418029785156 4 ENSG00000174231|ENST00000304992|PRPF8 2 [{I|L}T]DA 4 -1 22.267 0.0 0.0 4.0466 0.0 0.0 0.0 147.03276146690527 147.03276146690527 1.3391232314103156 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4386218330464625 0.0 [{I|L}T]DA 4.0466 - 269 1 2.084 121901.6 1.0 4125 3488 7611 DOHH2_400M_050219_2,7615 DOHH2_400M_050219_2,7615, False False ITDAYLDQY 41.733358 551.259265124798 1132497.75 7611.0 ENSG00000174231|ENST00000304992|PRPF8 4.003543893496196 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7616 41.739 307.0 342320.0 25 0 53509.0 + 23649 LTQTGVNRL 9 130 501.290428884807 1000.566304836414 2 501.2905761599541 MULTI CID FTMS 0 0 0 7611 157768.9375 0.1534626321700896 -5 0.2121963500976562 5 Unmodified _LTQTGVNRL_ REV__ENSG00000171219|ENST00000342711|CDC42BPG 15.847184025352805 0.4077185912009129 2 [{I|L}T]{[WT]|[RM]}Q 5 -1 21.439 0.0 0.0 2.1427 0.0 0.0 0.0 368.2079423698703 368.2079423698703 9.220449851406514 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 [{I|L}T]{[WT]|[RM]}Q 2.1427 - 100 1 2.084 83294.5 1.0 4126 3488 7611 DOHH2_400M_050219_2,7616 DOHH2_400M_050219_2,7616,LTQTGVNRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7617 41.753 800.0 164160.0 25 0 6283.0 + -1 FRMCFELLRRM 11 137 816.8943237914643 0 816.8929931521416 PEAK CID FTMS 0 0 0 7611 110735.140625 0.9762221908770484 -1 0.0364418029785156 6 Acetyl (Protein N-term),Carbamidomethyl (C),2 Oxidation (M) _(Acetyl (Protein N-term))FRM(Oxidation (M))C(Carbamidomethyl (C))FELLRRM(Oxidation (M))_ REV__ENST00000433866.6_1_16:83845703-83845736:+|nuORF 0.2690200627634905 0.4761840153648598 2 PN{I|L}NEAQRDG{M(Oxidation (M))|F}{I|L} 12 -1 96.645 0.0 0.0 5.9227 0.0 0.0 131.04271081505755 143.04648767642814 274.0891984914857 0.0 0.0 0.0 0.0 0 4.247425010840047 0.0 0.3807196863200844 1.0501648626366045 PN{I|L}NEAQRDG{M(Oxidation (M))|F}{I|L} 5.9227 - 3575 + 1 2.084 93115.3 0.7099999785423279 4127 3488 7611 DOHH2_400M_050219_2,7617 DOHH2_400M_050219_2,7617,FRMCFELLRRM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7618 41.767 800.0 710620.0 25 0 65677.0 + 43802 YEVEIDGKTY 10 205 608.7900816199875 1215.565610306775 2 608.7911254763603 MULTI CID FTMS 0 0 0 7611 110705.5390625 0.0424402127779476 -2 0.0857505798339843 7 Unmodified _YEVEIDGKTY_ ENSG00000111142|ENST00000323666|METAP2;nc|ENSG00000111142|P50579-2|METAP2;nc|ENSG00000111142|P50579-3|METAP2 79.42699986076722 0.0175374121712975 2 YEVE{I|L}DKGTY 10 2 + 121.67 0.0 0.0 10.01 10.01 85.285 0.0 0.0 0.0 52.47460417722439 24.660429802403925 24.660429802403925 2.218487496163561 0 1.968223800408798 1.6989700043360187 2.6866654986684733 0.0 YEVE{I|L}DKGTY;YEVE{I|L}DGKTY;YEVE{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GTY;YEVES[TP]KTY;YEVES[VG]{I|L}GTY;YEYHRKGTY;YEYHRGKTY;YEVWW{I|L}GTY;YE{[QD]|[EN]|[WG]|[KD]|[RS]}RGKGTY;{NN|[MP]|[D{I|L}]|[EV]}E[QP]{I|L}EVHH 10.01;9.8272;7.395;7.3263;7.193;6.7882;6.6057;6.2207;6.2074;6.0306 -;+;-;-;-;-;-;-;-;- + 15554 + 1 2.084 401079.4 0.6000000238418579 4128 3488 7611 DOHH2_400M_050219_2,7618 DOHH2_400M_050219_2,7618,YEVEIDGKTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7619 41.78 800.0 205920.0 25 0 23162.0 + 32750 SEDGSLHVF 9 156 495.7302195432642 989.4458861533284 2 495.7298461794853 MULTI CID FTMS 0 0 0 7611 105802.8125 0.977344094147696 -1 0.0364418029785156 8 Unmodified _SEDGSLHVF_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49051556-49052718:+|nuORF 70.71552829651908 0.0208223590022201 2 {[ES]|[DT]|[{I|L}C]}DGS{I|L}HV{M(Oxidation (M))|F} 9 0 + 43.44 0.0 0.0 4.3903 4.3903 74.244 0.0 0.0 0.0 7.147642715192504 3.5618356244003664 3.5618356244003664 3.5618356244003664 0 0.9247425010840048 0.0 0.7059771852360797 0.0 + + {[ES]|[DT]|[{I|L}C]}DGS{I|L}HV{M(Oxidation (M))|F};[HV]TGDV{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}VDGRY;[HV]TGVD{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};[H{I|L}]SGDV{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[TV]|[{I|L}S]}HGDV{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};[HV]TRD{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}[RH]V{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}VDRGY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}DVGRY 4.3903;4.0303;3.0768;3.0597;2.9734;2.7782;2.7092;2.601;2.2073;2.1061 +;-;-;-;-;-;-;-;-;- + 616 + 1 2.084 127450.5 0.4799999892711639 4129 3488 7611 DOHH2_400M_050219_2,7619 DOHH2_400M_050219_2,7619,SEDGSLHVF True True SEDGSLHVF 41.780453 495.729846179485 853998.0625 7611.0 ENSG00000178252|ENST00000608424|WDR6;;ENST00000420783.7_1_3:49051556-49052718:+|nuORF 6.104038238525391 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7620 41.785 178.0 583620.0 25 0 328300.0 -1 0 72 619.2728338285348 618.2655573619347 1 619.2731201052666 MULTI CID FTMS 0 0 0 7611 142172.734375 0.1595064274443497 -2 0.0857505798339843 9 2 Y 1 -1 14.604 0.0 0.0 2.3621 0.0 0.0 437.191123013105 0.0 437.191123013105 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.3621 - 6 + 1 2.084 80560.7 1.0 4130 3488 7611 DOHH2_400M_050219_2,7620 DOHH2_400M_050219_2,7620, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7621 41.792 362.0 256830.0 25 0 43901.0 + 24364 SETRTIYQF 9 103 572.3374980432548 1142.6604431533094 2 572.3383666872978 MULTI CID FTMS 0 0 0 7611 102428.71875 1.0 0 0.0 10 Unmodified _MERRLVNLI_ ENSG00000134242|ENST00000359785|PTPN22;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;nc|ENSG00000134242|Q9Y2R2|PTPN22;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;ENST00000484147.5_1_1:114375712-114414257:-|nuORF 6.2057823575117 0.6980434486082533 2 {M(Oxidation (M))|F} 1 8 15.485 0.0 0.0 1.3551 0.0 0.0 977.5813548738156 0.0 977.5813548738156 0.0 0.0733904965478142 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.3551 + + 147 + 1 2.084 75133.7 1.0 4131 3488 7611 DOHH2_400M_050219_2,7621 DOHH2_400M_050219_2,7621,MERRLVNLI False False SETRTIYQF 41.791924 572.338366687298 1394528.5 7611.0 ENSG00000134242|ENST00000359785|PTPN22;;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;;nc|ENSG00000134242|Q9Y2R2|PTPN22;;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;;ENST00000484147.5_1_1:114375712-114414257:-|nuORF 5.90052588780721 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7622 41.806 800.0 102520.0 25 0 19461.0 + -1 QETPPQVTF 9 87 1046.5136230168123 0 1046.519091784954 PEAK CID FTMS 0 0 0 7611 86231.3125 0.7991108255054421 2 -0.1948585510253906 11 nc|ENSG00000159753|Q6F5E8-2|CARMIL2;ENSG00000159753|ENST00000334583|CARMIL2 2 {M(Oxidation (M))|F}TVQET{I|L} 7 -1 36.904 0.0 0.0 1.7649 0.0 0.0 1063.516715080876 206.051568853186 1269.568283934062 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 1.2302046884880935 {M(Oxidation (M))|F}TVQET{I|L} 1.7649 - 1267 + 1 2.084 59689.9 0.5699999928474426 4132 3488 7611 DOHH2_400M_050219_2,7622 DOHH2_400M_050219_2,7622, False False QETPPQVTF 41.805793 1046.51909178495 3738310.625 7611.0 nc|ENSG00000159753|Q6F5E8-2|CARMIL2;;ENSG00000159753|ENST00000334583|CARMIL2 7.9429670969645185 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7624 41.812 112.0 648220.0 25 0 130770.0 + 38542 TSSKKSGL 8 89 404.2325049130775 806.450456892955 2 404.2327148318291 MULTI CID FTMS 0 0 0 7623 481528.21875 0.7041832008405832 1 -0.0869903564453125 1 Unmodified _TSSKKSGL_ REV__ENST00000511058.1_1_3:123385915-123401122:-|nuORF 1.844237919475145 0.8131380230371302 2 S 1 -1 8.8224 0.0 0.0 1.094 0.0 0.0 701.4073869850433 0.0 701.4073869850433 0.0 8.822357765462257 0.0 0.0 0 0.0 0.0 0.0 0.0 S 1.094 + + 1 + 1 2.087 61983.4 1.0 4133 3489 7623 DOHH2_400M_050219_2,7624 DOHH2_400M_050219_2,7624,TSSKKSGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7625 41.815 165.0 732070.0 25 0 57885.0 + 13331 HLDGQPFLRY 10 125 623.3222821153229 1244.6300112974457 2 623.3228637576103 MULTI CID FTMS 0 0 0 7623 340732.6875 0.8220623368128251 1 -0.0869903564453125 2 Unmodified _HLDGQPFLRY_ ENSG00000204516|ENST00000252229|MICB;ENSG00000204520|ENST00000449934|MICA;nc|ENSG00000204516|Q29980-2|MICB 38.17557092003332 0.1768326257063233 2 H{I|L}YH 4 8 58.22 0.0 0.0 4.6777 0.0 0.0 0.0 691.3594580130205 691.3594580130205 40.74539712336197 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.0 0.0 H{I|L}YH 4.6777 - 260 + 1 2.087 90337.0 1.0 4134 3489 7623 DOHH2_400M_050219_2,7625 DOHH2_400M_050219_2,7625,HLDGQPFLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7626 41.819 211.0 621840.0 25 0 72800.0 + 30573 RERDWFPDQGY 11 103 490.2250539293677 1467.6533323883032 3 490.2251464724541 MULTI CID FTMS 0 0 0 7623 326469.78125 1.0 0 0.0 3 Unmodified _RERDWFPDQGY_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 36.95490438235368 0.2593041297346161 2 {[RE]|[WV]}[RD]W{M(Oxidation (M))|F}PDQGY 11 0 + 70.851 0.0 0.0 4.8275 4.8275 81.528 0.0 0.0 0.0 15.413031420692649 57.46131393314112 15.413031420692649 9.128498242811006 0 0.9247425010840048 0.0 0.0 1.916386562212267 + + {[RE]|[WV]}[RD]W{M(Oxidation (M))|F}PDQGY;{[RE]|[WV]}[RD]W{M(Oxidation (M))|F}PD[AG]GY;{[RE]|[WV]}{[CT]|[{M(Oxidation (M))|F}G]}[RP]{M(Oxidation (M))|F}PDQGY;[DP]Q[QA]W{M(Oxidation (M))|F}[QT]QGY;[YG][YR]W{M(Oxidation (M))|F}[QT]QGY;{[RE]|[WV]}[RD]W{M(Oxidation (M))|F}PTN[{M(Oxidation (M))|F}T] 4.8275;4.2055;3.7923;3.3197;3.0609;1.4167 +;-;-;-;-;- + 227 1 2.087 105665.3 1.0 4135 3489 7623 DOHH2_400M_050219_2,7626 DOHH2_400M_050219_2,7626,RERDWFPDQGY False True RERDWFPDQGY 41.819259 490.225146472454 3569323.875 7623.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 9.526074568430582 3.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7627 41.825 345.0 484380.0 25 0 81082.0 27716 PLLLSPAG 8 137 384.2354898811049 766.4564268290098 2 384.2354003787041 MULTI CID FTMS 0 0 0 7623 232525.375 0.072007393500687 -2 0.1443099975585937 4 Unmodified _PLLLSPAG_ ENST00000558912.1_1_15:40628793-40629063:-|nuORF 0.6903765706972694 0.8201419426409876 2 {I|L} 1 7 9.9148 0.0 0.0 1.2936 0.0 0.0 635.3613015622115 0.0 635.3613015622115 0.0 3.4354332167857216 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2936 + + 9 + 1 2.087 131989.9 1.0 4136 3489 7623 DOHH2_400M_050219_2,7627 DOHH2_400M_050219_2,7627,PLLLSPAG False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7628 41.83 214.0 458370.0 25 0 92746.0 + 22988 KSTPVTVVL 9 109 472.2944569212886 942.5743609093772 2 472.2949096560478 MULTI CID FTMS 0 0 0 7623 219444.625 0.6648521897514782 -1 0.1078681945800781 5 Unmodified _LSGTLGALVL_ nc|ENSG00000108883|Q15029-3|EFTUD2;ENST00000586875.1_1_17:42957901-42959090:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;ENSG00000108883|ENST00000426333|EFTUD2 32.30548876998284 0.2428506522065767 2 {NN|[MP]|[D{I|L}]|[EV]}KRTVV{I|L} 8 7 + 56.631 0.0 0.0 6.0081 6.0081 85.059 0.0 0.0 0.0 7.835462822703505 13.788624837399295 7.835462822703505 7.835462822703505 0 0.9247425010840048 1.6989700043360187 0.9247425010840048 0.0 {NN|[MP]|[D{I|L}]|[EV]}KRTVV{I|L};{[TV]|[{I|L}S]}PVT[KS]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[VG]TVV{I|L};{[TV]|[{I|L}S]}P[KS]TVV{I|L};[VP]TVT[KS]V{I|L};[VP]T[KS]TVV{I|L};{NN|[MP]|[D{I|L}]|[EV]}KD[K{I|L}]V{I|L};{[TV]|[{I|L}S]}[KS]PTVV{I|L};VV[TP]T[KS]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}][KS]V{I|L} 6.0081;5.1768;5.0255;4.9232;4.8394;4.5858;4.5493;4.5193;3.8148;3.5789 -;-;-;-;-;-;-;-;-;- 610 1 2.087 78054.9 1.0 4137 3489 7623 DOHH2_400M_050219_2,7628 DOHH2_400M_050219_2,7628,LSGTLGALVL False False KSTPVTVVL 41.829536 472.294909656048 2109948.5 7623.0 nc|ENSG00000108883|Q15029-3|EFTUD2;;ENST00000586875.1_1_17:42957901-42959090:-|nuORF;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 2.8400027006864548 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7629 41.834 246.0 469060.0 25 0 80311.0 -1 0 129 479.277350532607 478.270074066007 1 479.2773925662041 MULTI CID FTMS 0 0 0 7623 215186.15625 0.2184024877867018 12 -0.7532844543457031 6 2 {I|L} 1 -1 8.8224 0.0 0.0 1.8446 0.0 0.0 347.1748419876851 0.0 347.1748419876851 0.0 1.83265772210207 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.8446 - 4 + 1 2.087 92816.7 1.0 4138 3489 7623 DOHH2_400M_050219_2,7629 DOHH2_400M_050219_2,7629, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7630 41.842 420.0 269640.0 25 0 15746.0 -1 LCKEAKLEM 9 149 561.2864472978183 1120.5583416624363 2 561.2868530154228 MULTI CID FTMS 0 0 0 7623 183480.859375 1.0 0 0.0 7 Carbamidomethyl (C) _LC(Carbamidomethyl (C))KEAKLEM_ nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2;nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2 36.12702656103203 0.0967173616627612 2 {[QN]|[E{I|L}]|[KN]}RY[PA]{I|L}EM 9 -1 + 68.725 0.0 0.0 6.1331 6.1331 77.867 0.0 0.0 0.0 3.979400086720375 16.478174818886373 3.979400086720375 1.2236374744834675 0 1.024227503252014 1.3979400086720375 1.341129063296272 0.0 {[QN]|[E{I|L}]|[KN]}RY[PA]{I|L}EM;{[QN]|[E{I|L}]|[KN]}[NP]{I|L}Y{I|L}EM;{[QN]|[E{I|L}]|[KN]}YR[PA]{I|L}EM;{[QN]|[E{I|L}]|[KN]}R[PA]Y{I|L}EM;[Y{I|L}]ER[PA]{I|L}EM;{[QN]|[E{I|L}]|[KN]}RY[PA]E{I|L}M;{[QN]|[E{I|L}]|[KN]}[NP]{I|L}YE{I|L}M;{[QN]|[E{I|L}]|[KN]}YR[PA]E{I|L}M;{[QN]|[E{I|L}]|[KN]}R[PA]YE{I|L}M;[Y{I|L}]ER[PA]E{I|L}M 6.1331;6.0239;6.0216;5.9493;5.778;5.5247;5.4155;5.4132;5.3409;5.1696 -;-;-;-;-;-;-;-;-;- 1864 1 2.087 90181.4 1.0 4139 3489 7623 DOHH2_400M_050219_2,7630 DOHH2_400M_050219_2,7630,LCKEAKLEM False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 7631 41.848 378.0 214780.0 25 0 16526.0 + 1915 AMDVYKNLY 9 118 558.7732049825506 1115.5318570319012 2 558.7733032107353 MULTI CID FTMS 0 0 0 7623 138334.609375 0.2822089450655179 3 -0.2885169982910156 8 Unmodified _AMDVYKNLY_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 56.17704186161178 0.0281986971544335 2 {[DS]|[MA]|[CV]|TT}DV[TP]{I|L}K 8 4 40.314 0.0 0.0 3.6139 0.0 0.0 0.0 257.05869470767817 257.05869470767817 16.435752032695873 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.7059771852360797 {[DS]|[MA]|[CV]|TT}DV[TP]{I|L}K 3.6139 - 647 + 1 2.087 66725.9 1.0 4140 3489 7623 DOHH2_400M_050219_2,7631 DOHH2_400M_050219_2,7631,AMDVYKNLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7632 41.856 435.0 253670.0 25 0 32815.0 + 23349 LTDFIQKY 8 138 514.2758789975692 0 514.2758666872978 PEAK CID FTMS 0 0 0 7623 121616.859375 1.0 0 0.0 9 Unmodified _LTDFIQKY_ ENSG00000065427|ENST00000302445|KARS1;ENST00000565738.1_1_16:75674022-75675473:-|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;nc|ENSG00000065427|Q15046-2|KARS1 68.08070601005525 0.0039982439012242 2 TD{M(Oxidation (M))|F}{I|L}QK 6 2 34.461 0.0 0.0 3.357 0.0 0.0 113.08433748556952 178.05112634830314 291.1354638338727 0.0 0.0 0.0 0.0 0 1.086696871556164 0.0 0.0 0.5 + TD{M(Oxidation (M))|F}{I|L}QK 3.357 + + 239 + 1 2.087 88314.6 1.0 4141 3489 7623 DOHH2_400M_050219_2,7632 DOHH2_400M_050219_2,7632,LTDFIQKY True True LTDFIQKY 41.856172 514.275866687298 872416.875 7623.0 nc|ENSG00000065427|Q15046-2|KARS1;;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;;ENST00000565738.1_1_16:75674022-75675473:-|nuORF;;ENSG00000065427|ENST00000302445|KARS1 7.279000600179036 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7633 41.861 236.0 299010.0 25 0 35273.0 + -1 TKLVKVMPS 9 104 509.8029128096132 1017.5912726860264 2 510.3062316775322 MULTI CID FTMS 0 0 0 7623 184258.890625 0.8099989518328021 -4 0.2094879150390625 10 Oxidation (M) _TKLVKVM(Oxidation (M))PS_ REV__ENST00000473035.1_1_2:26332713-26332770:+|nuORF 3.2813086475875832 0.8001353427076754 2 Y 1 -1 11.594 0.0 0.0 1.1393 0.0 0.0 836.5165026438374 0.0 836.5165026438374 0.0 1.1362189075153122 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1393 - 36 + 1 2.087 58357.1 1.0 4142 3489 7623 DOHH2_400M_050219_2,7633 DOHH2_400M_050219_2,7633,TKLVKVMPS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7634 41.864 171.0 400500.0 25 0 49747.0 + 30574 RERDWFPDQGY 11 89 734.8343759100202 1467.6541988868405 2 734.8310424685478 MULTI CID FTMS 0 0 0 7623 160598.0625 1.0 0 0.0 11 Unmodified _RERDWFPDQGY_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 4.603747607663779 0.8534271542535958 2 [DP]Q 3 8 10.458 0.0 0.0 0.71254 0.0 0.0 0.0 1124.4916066839685 1124.4916066839685 10.45757490560675 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + [DP]Q 0.71254 + + 45 1 2.087 52427.8 1.0 4143 3489 7623 DOHH2_400M_050219_2,7634 DOHH2_400M_050219_2,7634,RERDWFPDQGY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7635 41.879 800.0 70839.0 25 0 2758.9 -1 0 77 959.1139865651612 2874.320130295684 3 959.4484741091728 MULTI CID FTMS 0 0 0 7623 124062.3125 1.0 0 0.0 12 2 [NP]{I|L}NW 5 -1 17.703 0.0 0.0 0.6159 0.0 0.0 0.0 2247.0081825894645 2247.0081825894645 15.026975159433531 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}NW 0.6159 - 35 1 2.087 42332.7 0.6899999976158142 4144 3489 7623 DOHH2_400M_050219_2,7635 DOHH2_400M_050219_2,7635, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7636 41.893 800.0 104500.0 25 0 3791.5 -1 0 125 911.4164668776076 0 911.416064441204 PEAK CID FTMS 0 0 0 7623 105032.65625 0.9001684746794515 2 -0.2004928588867187 13 2 D{I|L}DA[PG]{[RE]|[WV]}DAD{I|L} 12 -1 30.583 0.0 0.0 1.6796 0.0 0.0 342.1370586558024 208.07332788638908 550.2103865421915 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 D{I|L}DA[PG]{[RE]|[WV]}DAD{I|L} 1.6796 - 721 + 1 2.087 61566.3 0.6899999976158142 4145 3489 7623 DOHH2_400M_050219_2,7636 DOHH2_400M_050219_2,7636, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7638 41.898 6.1 10169000.0 25 0 509650.0 -1 RCHRRRRRCCC 11 63 866.9070133939276 1731.7994738546552 2 866.9081298708916 MULTI CID FTMS 0 0 0 7637 8094110.5 1.0 0 0.0 1 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 2 [MN]PN{I|L}NADQ[QP]AN{I|L} 14 -1 89.835 0.0 0.0 5.1874 0.0 0.0 0.0 208.0734957330688 208.0734957330688 69.12208243522961 0.0 0.0 0.0 0 0.7742275032520141 1.5228787452803376 0.0 1.274227503252014 [MN]PN{I|L}NADQ[QP]AN{I|L} 5.1874 - 476 + 1 2.087 49413.2 1.0 4146 3490 7637 DOHH2_400M_050219_2,7638 DOHH2_400M_050219_2,7638,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7639 41.902 252.0 265610.0 25 0 42532.0 + 8419 ESGNRNHLY 9 107 545.2584439253241 1088.502334917448 2 545.2588989138603 MULTI CID FTMS 0 0 0 7637 159979.25 0.3883234206992306 2 -0.2015266418457031 2 Unmodified _ESGNRNHLY_ REV__nc|ENSG00000204403|Q6UXS9-3|CASP12;REV__nc|ENSG00000204403|Q6UXS9-4|CASP12;REV__nc|ENSG00000204403|Q6UXS9-5|CASP12;REV__nc|ENSG00000204403|Q6UXS9-6|CASP12;REV__nc|ENSG00000204403|Q6UXS9-7|CASP12;REV__nc|ENSG00000204403|Q6UXS9-8|CASP12;REV__nc|ENSG00000204403|Q6UXS9|CASP12 28.486842064014134 0.1687311288560894 2 {[ES]|[DT]|[{I|L}C]}SY{[QS]|[NT]}{I|L}{I|L}Y 9 -1 + 32.246 0.0 0.0 2.9624 2.9624 74.774 0.0 0.0 0.0 7.029478005380064 10.128940779022091 7.029478005380064 8.349621957594099 0 0.8935078169319297 0.0 1.2218487496163564 0.0 {[ES]|[DT]|[{I|L}C]}SY{[QS]|[NT]}{I|L}{I|L}Y;{[QS]|[NT]}S{I|L}{[ES]|[DT]|[{I|L}C]}Y{I|L}Y;{[ET]|[MV]}M[RN]Y{I|L}Y;{[MG]|[TS]}DY{[QS]|[NT]}{I|L}{I|L}Y;{[MG]|[TS]}N{I|L}{[ES]|[DT]|[{I|L}C]}Y{I|L}Y;[AG]SS{I|L}{[ES]|[DT]|[{I|L}C]}Y{I|L}Y;{[QS]|[NT]}{I|L}S{[ES]|[DT]|[{I|L}C]}Y{I|L}Y;{[ES]|[DT]|[{I|L}C]}[KA]{[ES]|[DT]|[{I|L}C]}Y{I|L}Y;[MT]E[RN]Y{I|L}Y;[AG]S{I|L}S{[ES]|[DT]|[{I|L}C]}Y{I|L}Y 2.9624;2.1953;2.0539;1.9745;1.9224;1.8018;1.7073;1.691;1.554;1.5252 -;-;-;-;-;-;-;-;-;- 242 1 2.087 55051.0 1.0 4147 3490 7637 DOHH2_400M_050219_2,7639 DOHH2_400M_050219_2,7639,ESGNRNHLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7640 41.905 131.0 653720.0 25 0 150840.0 + 16515 KAPLTLAA 8 96 392.7486243915319 783.4826958498637 2 392.7485534548759 MULTI CID FTMS 0 0 0 7637 527781.4375 0.3783442198638597 -1 0.0869903564453125 3 Unmodified _KAPLTLAA_ REV__ENST00000416447.1_1_21:42742154-42742199:+|nuORF 2.302733041254933 0.8103549651115762 2 P 1 -1 1.5938 0.0 0.0 0.20342 0.0 0.0 563.3508884541591 120.0509279840453 683.4018164382044 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.20342 + + 4 + 1 2.087 73072.3 1.0 4148 3490 7637 DOHH2_400M_050219_2,7640 DOHH2_400M_050219_2,7640,KAPLTLAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7641 41.907 77.0 1226800.0 25 0 122660.0 + 21201 LPDERTISL 9 111 522.2898839061793 1042.5652148791585 2 522.2906371951103 MULTI CID FTMS 0 0 0 7637 515300.78125 0.2435719329031953 -1 0.0869903564453125 4 Unmodified _LPDERTISL_ ENSG00000101138|ENST00000217109|CSTF1 36.506200033944 0.094635877243972 2 {I|L}PDE 4 5 52.924 0.0 0.0 5.0764 0.0 0.0 0.0 585.3403414361936 585.3403414361936 24.164069721344447 0.0 0.0 0.0 0 0.6382104921644451 1.6989700043360187 0.0 0.0 + {I|L}PDE 5.0764 + + 524 + 1 2.087 79539.1 1.0 4149 3490 7637 DOHH2_400M_050219_2,7641 DOHH2_400M_050219_2,7641,LPDERTISL True True LPDERTISL 41.906719 522.29063719511 24360758.0 7637.0 ENSG00000101138|ENST00000217109|CSTF1 4.413599809010823 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7642 41.909 119.0 711480.0 25 0 77935.0 + 38427 TRNDYVMMY 9 86 596.7597279453036 1191.504902957407 2 596.7606689333916 MULTI CID FTMS 0 0 0 7637 359737.6875 0.4537360959733563 -1 0.0869903564453125 5 Unmodified _TRNDYVMMY_ ENSG00000169180|ENST00000304658|XPO6;nc|ENSG00000169180|Q96QU8-2|XPO6 20.41453444215458 0.284085796332423 2 {[{M(Oxidation (M))|F}D]|MM}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}MMY 9 6 + 48.362 0.0 0.0 4.0589 4.0589 85.076 0.0 0.0 0.0 0.4036245867396815 24.71726222832956 0.4036245867396815 48.36242476018043 0 1.0 2.0 0.0 0.0 {[{M(Oxidation (M))|F}D]|MM}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}MMY 4.0589 - 112 1 2.087 66468.2 1.0 4150 3490 7637 DOHH2_400M_050219_2,7642 DOHH2_400M_050219_2,7642,TRNDYVMMY False True TRNDYVMMY 41.909192 596.760668933392 9125155.0 7637.0 nc|ENSG00000169180|Q96QU8-2|XPO6;;ENSG00000169180|ENST00000304658|XPO6 7.831684271494548 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7643 41.916 356.0 468840.0 25 0 37845.0 + 42407 VTEEFQPVY 9 137 556.269191630228 1110.5238303272558 2 556.2697021365166 MULTI CID FTMS 0 0 0 7637 275341.84375 0.1679585259471889 -1 0.0869903564453125 6 Unmodified _VTEEFQPVY_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 81.61307344734483 0.0171259190214613 2 EETV{M(Oxidation (M))|F}QPVY 9 4 + 75.459 0.0 0.0 6.7949 6.7949 84.434 0.0 0.0 0.0 9.846821098145568 8.824995917031941 8.824995917031941 4.771212547196626 0 1.524227503252014 1.2218487496163564 1.6109243748081783 0.3807196863200844 EETV{M(Oxidation (M))|F}QPVY;EET{M(Oxidation (M))|F}VQPVY;EET{M(Oxidation (M))|F}QVPVY;{[TV]|[{I|L}S]}EE{M(Oxidation (M))|F}QPVY;EETVQ{M(Oxidation (M))|F}PVY;EE{M(Oxidation (M))|F}TVQPVY;EETV{M(Oxidation (M))|F}[AG]PVY;EE{M(Oxidation (M))|F}TQVPVY;{[ET]|[MV]}EV{M(Oxidation (M))|F}QPVY;EE{M(Oxidation (M))|F}QTVPVY 6.7949;6.3653;6.1889;5.9082;5.8013;5.6887;5.6229;5.5123;5.404;5.382 -;-;-;+;-;-;-;-;-;- + 3376 1 2.087 140985.4 1.0 4151 3490 7637 DOHH2_400M_050219_2,7643 DOHH2_400M_050219_2,7643,VTEEFQPVY True True VTEEFQPVY 41.915628 556.269702136517 23652522.0 7637.0 nc|ENSG00000150093|P05556-2|ITGB1;;nc|ENSG00000150093|P05556-4|ITGB1;;nc|ENSG00000150093|P05556-5|ITGB1;;ENSG00000150093|ENST00000302278|ITGB1;;nc|ENSG00000150093|P05556-3|ITGB1 8.062218189239502 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7644 41.92 237.0 160380.0 25 0 15434.0 29554 QLPLTSICL 9 77 494.2823778453485 986.5502027574968 2 494.2830078005791 MULTI CID FTMS 0 0 0 7637 191392.078125 0.5806190188850247 -1 0.0869903564453125 7 Unmodified _QLPLTSICL_ ENSG00000203705|ENST00000366974|TATDN3;nc|ENSG00000203705|Q17R31-2|TATDN3;nc|ENSG00000203705|Q17R31-3|TATDN3;nc|ENSG00000203705|Q17R31-4|TATDN3;nc|ENSG00000203705|Q17R31-5|TATDN3 2.059750862983233 0.8427793054688888 2 Y 1 9 11.99 0.0 0.0 1.2153 0.0 0.0 805.4759667729251 0.0 805.4759667729251 0.0 9.771212547196624 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2153 - 4 + 1 2.087 37042.4 1.0 4152 3490 7637 DOHH2_400M_050219_2,7644 DOHH2_400M_050219_2,7644,QLPLTSICL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7645 41.924 220.0 478990.0 25 0 19613.0 + + -1 KELPQGTSGQLW 12 154 672.352080004802 1342.689607076404 2 672.3516113162041 MULTI CID FTMS 0 0 0 7637 172427.53125 1.0 0 0.0 8 Carbamidomethyl (C) _LSLDPC(Carbamidomethyl (C))LQVLW_ ENST00000332359.5_1_X:149283405-149283582:+|nuORF;ENSG00000130935|ENST00000253247|NOL11 16.149105407346934 0.6992268271266642 2 [{I|L}A]VSYYE{[TV]|[{I|L}S]}{I|L}W 11 -1 + 42.923 0.0 0.0 3.1968 3.1968 70.005 0.0 0.0 0.0 9.101523083377458 30.93304797363846 9.101523083377458 3.1767448706979806 0 1.424742501084005 0.5228787452803376 0.6747425010840047 0.0 [{I|L}A]VSYYE{[TV]|[{I|L}S]}{I|L}W;[{I|L}A]VQEMPG{[TV]|[{I|L}S]}{I|L}W;[{I|L}A]VQEMP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}W;[{I|L}A]V{[CT]|[{M(Oxidation (M))|F}G]}[{I|L}A]C(Carbamidomethyl (C))GH{I|L}W;[{I|L}A]VQD[WK]GQ{I|L}W;[{I|L}A]VQE[YQ]GH{I|L}[VS];{[DS]|[MA]|[CV]|TT}[VS]V[{I|L}A]C(Carbamidomethyl (C))GH{I|L}W;[{I|L}A]VQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[QP]Q{I|L}W;[{I|L}A]VQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[KP]Q{I|L}W;[{I|L}A][R{M(Oxidation (M))|F}][{I|L}A]C(Carbamidomethyl (C))GH{I|L}W 3.1968;2.9602;2.8231;2.7825;2.5223;2.3341;2.3303;2.2859;2.2859;2.272 -;-;-;-;-;-;-;-;-;- 1925 1 2.087 77986.5 1.0 4153 3490 7637 DOHH2_400M_050219_2,7645 DOHH2_400M_050219_2,7645,LSLDPCLQVLW False False KELPQGTSGQLW 41.924221 672.351611316204 2376346.25 7637.0 ENST00000332359.5_1_X:149283405-149283582:+|nuORF;;ENSG00000130935|ENST00000253247|NOL11 6.562697410583496 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7646 41.931 389.0 296380.0 25 0 37882.0 20537 LLLSGPPQ 8 146 412.7463797522136 823.4782065712271 2 412.7460815310478 MULTI CID FTMS 0 0 0 7637 138916.390625 0.3228875399058414 2 -0.2015266418457031 9 Unmodified _LLLSGPPQ_ ENSG00000196208|ENST00000381486|GREB1;nc|ENSG00000196208|Q4ZG55-4|GREB1 2.889219685676258 0.8067950007271085 2 AM 2 8 10.133 0.0 0.0 1.2305 0.0 0.0 340.2236422175146 278.1645907037719 618.3882329212865 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 AM 1.2305 - 14 + 1 2.087 92615.1 1.0 4154 3490 7637 DOHH2_400M_050219_2,7646 DOHH2_400M_050219_2,7646,LLLSGPPQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7647 41.939 432.0 346330.0 25 0 46524.0 + 5524 DMDKVLLKY 9 142 562.8042951162244 1123.5940372992486 2 562.8047363162041 MULTI CID FTMS 0 0 0 7637 118591.046875 0.3546797958194121 -1 0.0869903564453125 10 Unmodified _DMDKVLLKY_ ENSG00000068305|ENST00000557942|MEF2A;ENSG00000081189|ENST00000504921|MEF2C;ENSG00000116604|ENST00000348159|MEF2D;ENST00000558983.5_1_15:100173318-100211695:+|nuORF;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078|MEF2A;nc|ENSG00000081189|Q06413-2|MEF2C;nc|ENSG00000081189|Q06413-3|MEF2C;nc|ENSG00000081189|Q06413-4|MEF2C;nc|ENSG00000081189|Q06413-5|MEF2C;nc|ENSG00000081189|Q06413-6|MEF2C;nc|ENSG00000116604|Q14814-2|MEF2D;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D;nc|ENSG00000116604|Q14814-6|MEF2D 96.93554129104106 0.0121609977933358 2 DMDKV{I|L}{I|L}KY 9 0 + 99.423 0.0 0.0 8.8486 8.8486 89.85 0.0 0.0 0.0 13.343144584301442 6.53212513775344 6.53212513775344 6.53212513775344 0 2.805462187404089 2.0 0.0 0.3054621874040891 + + DMDKV{I|L}{I|L}KY;DMDKV{I|L}{I|L}YK;YYYV{I|L}{I|L}KY;YYYV{I|L}{I|L}YK;D{I|L}V{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L}KY;D{I|L}V{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}KY;D{I|L}V{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L}YK;D{I|L}V{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}YK;D{I|L}V{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}KY;D{I|L}V{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YK 8.8486;8.2673;4.9101;4.3288;3.1657;2.7207;2.5844;2.1394;1.7399;1.1585 +;-;-;-;-;-;-;-;-;- + 1078 + 1 2.087 114364.1 1.0 4155 3490 7637 DOHH2_400M_050219_2,7647 DOHH2_400M_050219_2,7647,DMDKVLLKY True True DMDKVLLKY 41.938886 562.804736316204 1561411.25 7637.0 ENST00000558983.5_1_15:100173318-100211695:+|nuORF;;nc|ENSG00000116604|Q14814-4|MEF2D;;ENSG00000116604|ENST00000348159|MEF2D;;nc|ENSG00000068305|Q02078|MEF2A;;nc|ENSG00000068305|Q02078-6|MEF2A;;nc|ENSG00000081189|Q06413-2|MEF2C;;nc|ENSG00000081189|Q06413-3|MEF2C;;nc|ENSG00000068305|Q02078-4|MEF2A;;nc|ENSG00000068305|Q02078-5|MEF2A;;ENSG00000068305|ENST00000557942|MEF2A;;nc|ENSG00000081189|Q06413-5|MEF2C;;nc|ENSG00000068305|Q02078-3|MEF2A;;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;;nc|ENSG00000116604|Q14814-6|MEF2D;;nc|ENSG00000116604|Q14814-2|MEF2D;;ENSG00000081189|ENST00000504921|MEF2C;;nc|ENSG00000081189|Q06413-6|MEF2C;;nc|ENSG00000081189|Q06413-4|MEF2C;;nc|ENSG00000116604|Q14814-3|MEF2D;;nc|ENSG00000116604|Q14814-5|MEF2D 8.187786738077799 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7648 41.95 612.0 194260.0 25 0 23590.0 13417 HLLRRRDP 8 133 531.816389403685 1061.61822587417 2 531.8175536990166 MULTI CID FTMS 0 0 0 7637 104736.234375 0.970604442127018 1 -0.1135025024414062 11 Unmodified _HLLRRRDP_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 10.183394434864962 0.7604730176254005 2 [H{I|L}]{I|L} 3 5 19.922 0.0 0.0 1.8765 0.0 0.0 0.0 695.3672852826261 695.3672852826261 8.952424927286845 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + [H{I|L}]{I|L} 1.8765 + + 131 1 2.087 96135.8 1.0 4156 3490 7637 DOHH2_400M_050219_2,7648 DOHH2_400M_050219_2,7648,HLLRRRDP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7649 41.963 800.0 187160.0 25 0 9150.8 + 617 AEKLITQTF 9 177 525.7952004758175 1049.575848018435 2 525.7957031130791 MULTI CID FTMS 0 0 0 7637 109677.0625 1.0 0 0.0 12 Unmodified _AEKLITQTF_ ENSG00000090273|ENST00000321265|NUDC 40.23920728925047 0.0741434193262949 2 {[CP]|[EA]}K{I|L}{I|L}TQT{M(Oxidation (M))|F} 9 0 + 36.647 0.0 0.0 3.4916 3.4916 67.286 0.0 0.0 0.0 0.5251378347332221 5.937040524562249 0.5251378347332221 0.5251378347332221 0 1.242992819099939 0.0 1.0114393726401687 0.0 + + {[CP]|[EA]}K{I|L}{I|L}TQT{M(Oxidation (M))|F};[QT]V{I|L}{I|L}TQT{M(Oxidation (M))|F};[TA]GV{I|L}{I|L}TQT{M(Oxidation (M))|F};[K{I|L}]WD[K{I|L}]T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}Q{I|L}{I|L}TQT{M(Oxidation (M))|F};{[CP]|[EA]}K{I|L}{I|L}T[AG]T{M(Oxidation (M))|F};[QT]V{I|L}{I|L}T[AG]T{M(Oxidation (M))|F};[{I|L}T]N{I|L}{I|L}TQT{M(Oxidation (M))|F};[TA]GV{I|L}{I|L}T[AG]T{M(Oxidation (M))|F};[KA]E{I|L}{I|L}TQT{M(Oxidation (M))|F} 3.4916;3.4416;3.3645;2.9259;2.8089;2.6143;2.5642;2.5023;2.4913;2.3555 +;-;-;-;-;-;-;-;-;- + 1557 1 2.087 114744.9 0.4900000095367431 4157 3490 7637 DOHH2_400M_050219_2,7649 DOHH2_400M_050219_2,7649,AEKLITQTF True True AEKLITQTF 41.963419 525.795703113079 491105.1875 7637.0 ENSG00000090273|ENST00000321265|NUDC 5.83374039332072 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7650 41.975 645.0 197440.0 25 0 13138.0 + 33129 SETRTIYQF 9 163 572.7864500339924 1143.5583471347848 2 572.7866088747978 MULTI CID FTMS 0 0 0 7637 86342.7265625 1.0 0 0.0 13 Unmodified _SETRTIYQF_ ENSG00000134242|ENST00000359785|PTPN22;ENST00000484147.5_1_1:114375712-114414257:-|nuORF;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;nc|ENSG00000134242|Q9Y2R2|PTPN22 55.50274090549119 0.0285720310785888 2 EE[KS]T{I|L}YQ{M(Oxidation (M))|F} 9 3 + 43.1 0.0 0.0 3.7689 3.7689 69.336 0.0 0.0 0.0 1.201072897758138 30.001091895161 1.201072897758138 1.4161854674108554 0 0.6989700043360187 1.5228787452803376 0.6747425010840047 0.4247425010840047 EE[KS]T{I|L}YQ{M(Oxidation (M))|F};[{I|L}T]MQT{I|L}YQ{M(Oxidation (M))|F};[{I|L}T]M[WR]YQ{M(Oxidation (M))|F};EE[KS]T{I|L}Y[AG]{M(Oxidation (M))|F};[{I|L}T]M[AG]T{I|L}YQ{M(Oxidation (M))|F};[{I|L}T]MQT{I|L}Y[AG]{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[TP]T{I|L}YQ{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}A[TP]T{I|L}YQ{M(Oxidation (M))|F};[{I|L}T][VG]CT{I|L}YQ{M(Oxidation (M))|F};[VG][{I|L}T]CT{I|L}YQ{M(Oxidation (M))|F} 3.7689;3.6451;3.0631;2.9637;2.8399;2.8399;2.8002;2.5817;2.527;2.494 -;-;-;-;-;-;-;-;-;- 2527 1 2.087 96699.5 1.0 4158 3490 7637 DOHH2_400M_050219_2,7650 DOHH2_400M_050219_2,7650,SETRTIYQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7651 41.978 109.0 700340.0 25 0 112350.0 -1 0 103 377.2171344241988 376.2098579575988 1 377.2171508669853 MULTI CID FTMS 0 0 0 7637 234348.640625 0.242278976658738 -3 0.2313003540039062 14 2 Y 1 -1 1.7827 0.0 0.0 0.47387 0.0 0.0 134.0938281497847 76.02501856021718 210.1188467100019 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.47387 - 5 + 1 2.087 61454.6 1.0 4159 3490 7637 DOHH2_400M_050219_2,7651 DOHH2_400M_050219_2,7651, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7652 41.992 800.0 354590.0 25 0 21521.0 -1 0 159 771.7014771515778 2312.082602054933 3 772.0374633669853 MULTI CID FTMS 0 0 0 7637 199886.765625 0.711879462618289 -1 0.0869903564453125 15 2 [MN][WK]QSQAG{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}C 13 -1 67.56 0.0 0.0 2.9221 0.0 0.0 0.0 753.4080576024936 753.4080576024936 37.61186777096637 0.0 0.0 0.0 0 1.6989700043360187 1.3979400086720375 1.0 0.9027084789088669 [MN][WK]QSQAG{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}C 2.9221 - 19190 1 2.087 196847.8 0.6899999976158142 4160 3490 7637 DOHH2_400M_050219_2,7652 DOHH2_400M_050219_2,7652, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7653 41.998 324.0 368290.0 25 0 65410.0 + -1 EQMCKPPLY 9 122 583.2729042130643 1164.5312554929285 2 583.2731201052666 MULTI CID FTMS 0 0 0 7637 178431.703125 0.487136865420699 -2 0.1948585510253906 16 Carbamidomethyl (C) _EQMC(Carbamidomethyl (C))KPPLY_ REV__ENSG00000168404|ENST00000308807|MLKL 7.910154910731844 0.6385446671287552 2 {I|L}GK{I|L}P{M(Oxidation (M))|F}Y 7 -1 35.17 0.0 0.0 3.0201 0.0 0.0 328.04349966758394 0.0 328.04349966758394 0.0 20.5655637381809 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}GK{I|L}P{M(Oxidation (M))|F}Y 3.0201 - 254 + 1 2.087 93784.0 1.0 4161 3490 7637 DOHH2_400M_050219_2,7653 DOHH2_400M_050219_2,7653,EQMCKPPLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7654 42.001 164.0 413080.0 25 0 48302.0 + 12660 GVLGQQKSR 9 96 486.7825404297312 971.5505279262624 2 486.7828246951103 MULTI CID FTMS 0 0 0 7637 142648.203125 0.6784927010356107 -1 0.0869903564453125 17 Unmodified _GVLGQQKSR_ REV__ENSG00000188501|ENST00000695545|LCTL;REV__nc|ENSG00000188501|Q6UWM7-2|LCTL 2.302733041254933 0.8342969208511092 2 {I|L} 1 -1 10.181 0.0 0.0 1.0479 0.0 0.0 840.45514326005 0.0 840.45514326005 0.0 10.181060863272222 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0479 + + 4 + 1 2.087 52695.2 1.0 4162 3490 7637 DOHH2_400M_050219_2,7654 DOHH2_400M_050219_2,7654,GVLGQQKSR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7655 42.006 206.0 285570.0 25 0 25111.0 + 10237 FQNPSTVTL 9 102 503.7636631371322 1005.5127733410644 2 503.7639037966728 MULTI CID FTMS 0 0 0 7637 116250.9609375 1.0 0 0.0 18 Unmodified _FQNPSTVTL_ ENSG00000121621|ENST00000263181|KIF18A 34.10243960390752 0.1078313939113124 2 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L} 4 6 19.085 0.0 0.0 1.8981 0.0 0.0 0.0 500.2475810405363 500.2475810405363 0.8843154735291847 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L} 1.8981 - 133 1 2.087 50279.7 1.0 4163 3490 7637 DOHH2_400M_050219_2,7655 DOHH2_400M_050219_2,7655,FQNPSTVTL True True FQNPSTVTL 42.006481 503.763903796673 1310979.25 7637.0 ENSG00000121621|ENST00000263181|KIF18A 5.613353729248047 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7657 42.011 32.0 2158400.0 25 0 254080.0 + 43803 YEVEIDGKTY 10 85 608.7900816199875 1215.565610306775 2 608.7907592654228 MULTI CID FTMS 0 0 0 7656 1416100.375 0.5428779963394752 1 -0.0880241394042968 1 Unmodified _YEVEIDGKTY_ ENSG00000111142|ENST00000323666|METAP2;nc|ENSG00000111142|P50579-2|METAP2;nc|ENSG00000111142|P50579-3|METAP2 62.86856922530385 0.0290614069976636 2 YEVE{I|L}DKGTY 10 2 + 117.2 0.0 0.0 9.6415 9.6415 65.818 0.0 0.0 0.0 72.31167528634693 23.93553046518285 23.93553046518285 0.0 0 2.0 1.6989700043360187 2.004432191740108 0.4247425010840047 YEVE{I|L}DKGTY;YEVE{I|L}DGKTY;{NN|[MP]|[D{I|L}]|[EV]}E[QP]{I|L}EVHH;{NN|[MP]|[D{I|L}]|[EV]}[KG]EVTYEY;[KG]D{I|L}EVTYEY;{NN|[MP]|[D{I|L}]|[EV]}[KG]TEVYEY;{NN|[MP]|[D{I|L}]|[EV]}[KG]T[Y{M(Oxidation (M))|F}]V[C(Carbamidomethyl (C))N];{NN|[MP]|[D{I|L}]|[EV]}EV[KG]TYEY;[KG]D{I|L}TEVYEY;[KG]D{I|L}T[Y{M(Oxidation (M))|F}]VHH 9.6415;9.6415;5.7116;3.9835;3.9205;3.8155;3.8034;3.7699;3.7526;3.7405 -;+;-;-;-;-;-;-;-;- + 1360 + 1 2.078 57617.1 1.0 4164 3491 7656 DOHH2_400M_050219_2,7657 DOHH2_400M_050219_2,7657,YEVEIDGKTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7658 42.013 73.0 910570.0 25 0 117440.0 + 498 AEGPPRLAI 9 77 462.2690524520986 922.5235519709972 2 462.2690917849541 MULTI CID FTMS 0 0 0 7656 627198.8125 0.4337906864333902 1 -0.0880241394042968 2 Unmodified _AEGPPRLAI_ ENSG00000089693|ENST00000203630|MLF2 32.30548876998284 0.1201446275138228 2 {[CP]|[EA]}GPP[R{I|L}]A{I|L} 9 0 + 30.556 0.0 0.0 3.3123 3.3123 82.184 0.0 0.0 0.0 15.942124970647033 2.8533500713746243 2.8533500713746243 30.556387632578467 0 0.8494850021680094 0.0 0.0 0.0 + + {[CP]|[EA]}GPP[R{I|L}]A{I|L} 3.3123 + + 65 + 1 2.078 57961.9 1.0 4165 3491 7656 DOHH2_400M_050219_2,7658 DOHH2_400M_050219_2,7658,AEGPPRLAI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7659 42.014 16.0 4689200.0 25 0 584800.0 + 36814 TEIGIRSGW 9 68 509.7694119020393 1017.5242708708786 2 509.7697631716728 MULTI CID FTMS 0 0 0 7656 3549538.25 0.6050510350232903 -1 0.1135025024414062 3 Unmodified _TEIGIRSGW_ ENSG00000189233|ENST00000413272|NUGGC 31.26834338654808 0.1333407332142048 2 TE{I|L}G{I|L} 5 4 56.938 0.0 0.0 5.5958 0.0 0.0 0.0 501.22004388590176 501.22004388590176 44.17399041687222 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + TE{I|L}G{I|L} 5.5958 + + 47 + 1 2.078 61220.7 1.0 4166 3491 7656 DOHH2_400M_050219_2,7659 DOHH2_400M_050219_2,7659,TEIGIRSGW False True TEIGIRSGW 42.01407 509.769763171673 77867472.0 7656.0 ENSG00000189233|ENST00000413272|NUGGC 3.9192749659220376 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7660 42.015 16.0 2971300.0 25 0 161900.0 -1 0 47 873.9148948428956 1745.815236752591 2 873.9152099490166 MULTI CID FTMS 0 0 0 7656 2898449.0 0.7789719297759969 -1 0.1135025024414062 4 2 [MN]PN{I|L}NEA[RH][Y{M(Oxidation (M))|F}]{I|L}Q 14 -1 + 77.137 0.0 0.0 4.4184 4.4184 86.154 0.0 0.0 0.0 48.86631982299271 6.412090597409275 6.412090597409275 37.32139188265293 0 0.6989700043360187 1.3979400086720375 0.0 1.079689690656103 [MN]PN{I|L}NEA[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[NP]{I|L}NM[RH]AEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NM[RH]AEN[Y{M(Oxidation (M))|F}][Q{I|L}];[NP]{I|L}NM[RH]AEY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[Q{I|L}] 4.4184;2.2807;1.8975;1.839 -;-;-;- 275 + 1 2.078 37279.6 1.0 4167 3491 7656 DOHH2_400M_050219_2,7660 DOHH2_400M_050219_2,7660, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7661 42.017 52.0 1387100.0 25 0 207020.0 + 9452 FLDASGAKLDY 11 75 600.3007213517965 1198.5868897703929 2 600.3011352419853 MULTI CID FTMS 0 0 0 7656 1072145.5 1.0 0 0.0 5 Unmodified _FLDASGAKLDY_ ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1 48.07275321834293 0.1283031204265279 2 {M(Oxidation (M))|F}{I|L}DASGA[K{I|L}]DY 11 0 + 73.722 0.0 0.0 6.1508 6.1508 77.128 0.0 0.0 0.0 44.07577319177794 16.57577319177794 16.57577319177794 0.5551732784983159 0 1.3494850021680094 0.0 0.6307196863200843 0.0 + + {M(Oxidation (M))|F}{I|L}DASGA[K{I|L}]DY;{M(Oxidation (M))|F}{I|L}DASQ[K{I|L}]DY;{M(Oxidation (M))|F}{I|L}DAQS[K{I|L}]DY;{M(Oxidation (M))|F}{I|L}DA[AG]S[K{I|L}]DY;{M(Oxidation (M))|F}{I|L}DAQRRMY;{M(Oxidation (M))|F}{I|L}D{[QS]|[NT]}A[K{I|L}]DY;{M(Oxidation (M))|F}{I|L}WSGRRDY;{M(Oxidation (M))|F}{I|L}DA[AG]RRMY;[KQ]S{[HG]|PP}AGSAD{I|L}E;[KQ]S{[HG]|PP}QSAD{I|L}E 6.1508;6.1044;5.7724;5.0078;4.9146;4.7912;4.64;4.1464;4.0727;4.0234 +;-;-;-;-;-;-;-;-;- + 1131 + 1 2.078 56359.9 1.0 4168 3491 7656 DOHH2_400M_050219_2,7661 DOHH2_400M_050219_2,7661,FLDASGAKLDY False True FLDASGAKLDY 42.016627 600.301135241985 15131723.0 7656.0 nc|ENSG00000082153|Q7L1Q6-2|BZW1;;nc|ENSG00000082153|Q7L1Q6-3|BZW1;;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;;nc|ENSG00000082153|Q7L1Q6-4|BZW1;;ENSG00000082153|ENST00000409600|BZW1 6.881892999013265 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7662 42.018 53.0 945500.0 25 0 224760.0 + 37549 TLHVSVKFA 9 72 501.290428884807 1000.566304836414 2 501.2907287478447 MULTI CID FTMS 0 0 0 7656 980315.3125 0.9535575924943652 -2 0.2004928588867187 6 Unmodified _TLHVSVKFA_ REV__ENSG00000268696|ENST00000600766|ZNF723;REV__ENST00000600766.1_3_19:23032061-23041232:+|nuORF 2.059750862983233 0.8427793054688888 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.078 43220.7 1.0 4169 3491 7656 DOHH2_400M_050219_2,7662 DOHH2_400M_050219_2,7662,TLHVSVKFA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7663 42.023 274.0 596040.0 25 0 59644.0 + 6551 EALKKLIL 8 145 464.3155603760029 926.6165678188056 2 464.3156616091728 MULTI CID FTMS 0 0 0 7656 277055.0 0.3100192933312996 -2 0.2004928588867187 7 Unmodified _EALKKLIL_ ENSG00000104738|ENST00000649973|MCM4 78.14939416004806 0.0999748067387998 2 EA{I|L}KK{I|L}{I|L}{I|L} 8 0 + 48.701 0.0 0.0 5.2558 5.2558 86.075 0.0 0.0 0.0 17.109178215846654 14.904630595263413 14.904630595263413 10.993208897830442 0 1.2940228147639203 1.5228787452803376 0.0 0.0 + + EA{I|L}KK{I|L}{I|L}{I|L};{I|L}{I|L}KK{[CP]|[EA]}{I|L}{I|L};{I|L}{I|L}K{[QS]|[NT]}{I|L}{I|L}{I|L};{I|L}{I|L}KK{I|L}{[CP]|[EA]}{I|L};[K{I|L}]{I|L}K{[CP]|[EA]}{I|L}{I|L};[K{I|L}]K{I|L}{[CP]|[EA]}{I|L}{I|L};KK{I|L}{I|L}{[CP]|[EA]}{I|L}{I|L};[K{I|L}]{I|L}{[QS]|[NT]}{I|L}{I|L}{I|L};[K{I|L}]K{[CP]|[EA]}{I|L}{I|L}{I|L};KK{I|L}{[CP]|[EA]}{I|L}{I|L}{I|L} 5.2558;4.0694;3.7734;3.5009;3.1479;3.0928;3.0074;2.852;2.7969;2.7114 +;-;-;-;-;-;-;-;-;- + 422 + 1 2.078 125736.8 1.0 4170 3491 7656 DOHH2_400M_050219_2,7663 DOHH2_400M_050219_2,7663,EALKKLIL True True EALKKLIL 42.023039 464.316 10492502.0 7656.0 ENSG00000104738|ENST00000649973|MCM4 2.7540934085845947 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7664 42.027 216.0 354480.0 25 0 25563.0 + 11142 GEILRTEQW 9 102 566.2932352630266 1130.5719175928532 2 566.2935058474541 MULTI CID FTMS 0 0 0 7656 235434.453125 0.3992848236096451 2 -0.1510734558105468 8 Unmodified _GEILRTEQW_ ENSG00000104960|ENST00000391842|PTOV1;ENST00000596424.1_1_19:50360315-50362048:+|nuORF;nc|ENSG00000104960|Q86YD1-2|PTOV1;nc|ENSG00000104960|Q86YD1-3|PTOV1 60.899326713953855 0.0255841537240836 2 {[DA]|[EG]}{I|L}{I|L}RTEQW 9 0 + 56.058 0.0 0.0 4.9584 4.9584 73.25 0.0 0.0 0.0 15.08582016186226 12.26280941356464 12.26280941356464 0.9691001300805624 0 2.048455006504028 1.3979400086720375 0.0 0.3054621874040891 + + {[DA]|[EG]}{I|L}{I|L}RTEQW;{[DA]|[EG]}{I|L}{I|L}S{I|L}WQW;{[DA]|[EG]}{I|L}{I|L}S{I|L}QWW;{[DA]|[EG]}{I|L}{I|L}S{I|L}GAWW;{[DA]|[EG]}{I|L}{I|L}RTE[AG]W;{[DA]|[EG]}{I|L}{I|L}RTAW{[DA]|[EG]};{[DA]|[EG]}{I|L}{I|L}RTA{[DA]|[EG]}W;{[DA]|[EG]}{I|L}{I|L}S{I|L}W[AG]W;{[TV]|[{I|L}S]}W{I|L}{I|L}GEQW;{[ET]|[MV]}R{I|L}{I|L}GEQW 4.9584;4.8727;4.6025;4.4881;4.1439;3.8737;3.8737;3.788;3.624;3.4666 +;-;-;-;-;-;-;-;-;- + 778 1 2.078 60694.9 1.0 4171 3491 7656 DOHH2_400M_050219_2,7664 DOHH2_400M_050219_2,7664,GEILRTEQW True True GEILRTEQW 42.027139 566.293505847454 8246083.0 7656.0 nc|ENSG00000104960|Q86YD1-3|PTOV1;;nc|ENSG00000104960|Q86YD1-2|PTOV1;;ENSG00000104960|ENST00000391842|PTOV1;;ENST00000596424.1_1_19:50360315-50362048:+|nuORF 5.931990146636963 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7665 42.035 446.0 216860.0 25 0 61405.0 + 43001 VVVPQIVL 8 104 433.7881644177896 865.5617759023793 2 433.7877380251884 MULTI CID FTMS 0 0 0 7656 184958.359375 1.0 0 0.0 9 Unmodified _VVVPQIVL_ REV__ENST00000521506.1_1_5:171681851-171682091:-|nuORF 0.0 0.8243325171867699 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 8 1 2.078 79353.0 1.0 4172 3491 7656 DOHH2_400M_050219_2,7665 DOHH2_400M_050219_2,7665,VVVPQIVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7666 42.045 577.0 358220.0 25 0 68693.0 19244 LEILLPFVL 9 155 528.8388044521324 1055.6630559710648 2 528.8396484255791 MULTI CID FTMS 0 0 0 7656 141513.625 1.0 0 0.0 10 Unmodified _LEILLPFVL_ ENSG00000167716|ENST00000409644|WDR81;ENST00000464528.5_1_17:1630890-1639119:+|nuORF;nc|ENSG00000167716|Q562E7-4|WDR81 11.640296217721598 0.521594087909532 2 {I|L} 1 8 18.737 0.0 0.0 1.7749 0.0 0.0 924.5679001866882 0.0 924.5679001866882 0.0 7.317141772374232 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + {I|L} 1.7749 + + 522 + 1 2.078 162045.2 1.0 4173 3491 7656 DOHH2_400M_050219_2,7666 DOHH2_400M_050219_2,7666,LEILLPFVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7667 42.059 800.0 229750.0 25 0 20431.0 + 6045 DSEKVIAGLY 10 164 547.789951932479 1093.5653509317578 2 547.7895995974541 MULTI CID FTMS 0 0 0 7656 122312.421875 1.0 0 0.0 11 Unmodified _DSEKVIAGLY_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 38.61474834105838 0.1721950110283317 2 {[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))E]|[WC]}VAAV{I|L}Y 10 5 + 47.805 0.0 0.0 4.3715 4.3715 69.536 0.0 0.0 0.0 1.4569395819891966 2.4910270749855883 1.4569395819891966 0.2422750325201477 0 1.0 0.8860566476931632 1.3494850021680094 0.0 {[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))E]|[WC]}VAAV{I|L}Y;{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))E]|[WC]}V{I|L}Q{I|L}Y;{[CP]|[EA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VAAV{I|L}Y;{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))E]|[WC]}VAG{I|L}{I|L}Y;{[CP]|[EA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{I|L}Q{I|L}Y;{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))E]|[WC]}V{I|L}AG{I|L}Y;{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))E]|[WC]}V{I|L}GA{I|L}Y;{[QN]|[E{I|L}]|[KN]}HR[YT]{I|L}Y;{[CP]|[EA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VAG{I|L}{I|L}Y;{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))E]|[WC]}VQ{I|L}{I|L}Y 4.3715;4.3493;4.2383;4.2351;4.2161;4.1739;4.1739;4.1437;4.1019;4.0741 -;-;-;-;-;-;-;-;-;- 2262 1 2.078 136471.8 0.550000011920929 4174 3491 7656 DOHH2_400M_050219_2,7667 DOHH2_400M_050219_2,7667,DSEKVIAGLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7668 42.073 800.0 81243.0 25 0 4992.3 + -1 LFYRMRCERLV 11 104 779.9020364408922 1557.7895199485845 2 779.9017822146416 MULTI CID FTMS 0 0 0 7656 97908.3125 1.0 0 0.0 12 Carbamidomethyl (C),Oxidation (M) _LFYRM(Oxidation (M))RC(Carbamidomethyl (C))ERLV_ REV__ENSG00000221947|ENST00000408926|XKR9 2.9952420565917617 0.861016188266951 2 {[QS]|[NT]}SV[KC][HK]QSTNV{I|L} 14 -1 + 55.71 0.0 0.0 3.5762 3.5762 73.758 0.0 0.0 0.0 4.726278332130228 29.715020280823133 4.726278332130228 5.796444610697478 0 0.4876954943324545 0.7958800173440752 1.8684151806525389 0.0 {[QS]|[NT]}SV[KC][HK]QSTNV{I|L};{[QS]|[NT]}SVH[K{I|L}][MD]STNV{I|L};{[QS]|[NT]}VS[KC][HK]QSTNV{I|L};{[QS]|[NT]}SVH[NP]{I|L}YSTNV{I|L};{[QS]|[NT]}SVH{[SA]|[TG]}K[NS]STNV{I|L};[KG]ES[KC][HK]QSTNV{I|L};{[MG]|[TS]}NV[KC][HK]QSTNV{I|L};{[QS]|[NT]}VSH[K{I|L}][MD]STNV{I|L};{[QS]|[NT]}V[WQ][PA]TQSTNV{I|L};{[NV]|[RG]}TS[KC][HK]QSTNV{I|L} 3.5762;3.2042;3.1386;2.9408;2.8357;2.797;2.7859;2.7665;2.6899;2.6037 -;-;-;-;-;-;-;-;-;- 895 1 2.078 50093.5 0.6700000166893005 4175 3491 7656 DOHH2_400M_050219_2,7668 DOHH2_400M_050219_2,7668,LFYRMRCERLV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7669 42.087 800.0 189880.0 25 0 14856.0 16972 KISAALAK 8 198 401.2623633780668 800.5101738229336 2 401.2621032595634 MULTI CID FTMS 0 0 0 7656 103410.4140625 1.0 0 0.0 13 Unmodified _KISAALAK_ ENST00000263847.5_1_11:59368828-59369130:-|nuORF 0.6903765706972694 0.8201419426409876 2 A 1 7 8.7724 0.0 0.0 1.0959 0.0 0.0 711.4617480800609 0.0 711.4617480800609 0.0 1.039028361164438 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 1.0959 + + 55 + 1 2.078 123038.9 0.4199999868869781 4176 3491 7656 DOHH2_400M_050219_2,7669 DOHH2_400M_050219_2,7669,KISAALAK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7670 42.094 350.0 241070.0 25 0 31384.0 31588 RQQAAQPL 8 118 456.2566586164001 910.4987642996 2 456.2569763064384 MULTI CID FTMS 0 0 0 7656 92805.21875 0.4245837555378036 -2 0.2004928588867187 14 Unmodified _RQQAAQPL_ ENSG00000185813|ENST00000538936|PCYT2;ENST00000574343.5_1_17:79862711-79863545:-|nuORF;nc|ENSG00000185813|Q99447-2|PCYT2;nc|ENSG00000185813|Q99447-3|PCYT2;nc|ENSG00000185813|Q99447-4|PCYT2 2.577480529830294 0.808687252328423 2 {I|L} 1 7 9.3323 0.0 0.0 1.025 0.0 0.0 779.4035932564345 0.0 779.4035932564345 0.0 7.113817961985347 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.025 + + 17 + 1 2.078 70444.7 1.0 4177 3491 7656 DOHH2_400M_050219_2,7670 DOHH2_400M_050219_2,7670,RQQAAQPL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7672 42.099 29.0 1869100.0 25 0 458530.0 + 42975 VVTPLPAA 8 66 384.2354898811049 766.4564268290098 2 384.2353393435478 MULTI CID FTMS 0 0 0 7671 2180990.5 0.6753991522635338 1 -0.06304931640625 1 Unmodified _VVTPLPAA_ REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF 0.0 0.8243325171867699 2 P 1 -1 1.1092 0.0 0.0 0.14472 0.0 0.0 546.3243752926802 120.05110346011952 666.3754787527997 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.14472 + + 2 + 1 2.072 52016.1 1.0 4178 3492 7671 DOHH2_400M_050219_2,7672 DOHH2_400M_050219_2,7672,VVTPLPAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7673 42.101 91.0 714210.0 25 0 104920.0 16812 KGPKTPDGR 9 91 478.2693758599064 954.5241987866128 2 478.2691833376884 MULTI CID FTMS 0 0 0 7671 449659.78125 0.8143130192626612 1 -0.06304931640625 2 Unmodified _KGPKTPDGR_ ENSG00000095464|ENST00000371447|PDE6C 3.944395688203298 0.7769873103969335 2 A 1 9 1.5938 0.0 0.0 0.16697 0.0 0.0 537.3321039153223 343.14203821353755 880.4741421288597 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.16697 - 2 + 1 2.072 55186.2 1.0 4179 3492 7671 DOHH2_400M_050219_2,7673 DOHH2_400M_050219_2,7673,KGPKTPDGR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7674 42.102 12.0 6459200.0 25 0 732550.0 + 35665 SVDPHGFISY 10 98 561.2666909069633 1120.5188288807265 2 561.2669555544853 MULTI CID FTMS 0 0 0 7671 4606842.5 0.2945754132445429 -2 0.2015266418457031 3 Unmodified _SVDPHGFISY_ ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;nc|ENSG00000105197|Q3ZCQ8-3|TIMM50 85.64151623876279 0.0124443716933876 2 [VS]D[HM]{I|L}G{I|L}SY 10 3 + 70.947 0.0 0.0 6.3316 6.3316 82.557 0.0 0.0 0.0 35.12402212786767 11.505149978319906 11.505149978319906 4.317496819840656 0 1.5044321917401078 2.0 0.9247425010840048 0.0 [VS]D[HM]{I|L}G{I|L}SY;[VS]DPH{M(Oxidation (M))|F}G{I|L}SY;WDP[NG]{I|L}G{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}SDVSY;[VS][HM]D{I|L}G{I|L}SY;[HM]VDS{I|L}G{I|L}SY;{[CT]|[{M(Oxidation (M))|F}G]}HP{I|L}SDVSY;{[CT]|[{M(Oxidation (M))|F}G]}H{I|L}PSDVSY;{[HG]|PP}P{M(Oxidation (M))|F}{I|L}SDVSY;{[HG]|PP}{M(Oxidation (M))|F}P{I|L}SDVSY 6.3316;5.9463;5.6828;5.6405;5.2315;5.109;4.9917;4.8385;4.7315;4.7315 -;-;-;-;-;-;-;-;-;- 2271 + 1 2.072 60464.0 1.0 4180 3492 7671 DOHH2_400M_050219_2,7674 DOHH2_400M_050219_2,7674,SVDPHGFISY True True SVDPHGFISY 42.102322 561.266955554485 536488400.0 7671.0 nc|ENSG00000105197|Q3ZCQ8-3|TIMM50;;ENSG00000105197|ENST00000607714|TIMM50;;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50 7.913015206654866 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7675 42.104 97.0 781840.0 25 0 47749.0 + 31945 RVDPAKGLFY 10 101 583.3219778433258 1164.6294027534516 2 583.3218261599541 MULTI CID FTMS 0 0 0 7671 343220.15625 0.8441396939020438 -2 0.2015266418457031 4 Unmodified _RVDPAKGLFY_ ENSG00000144028|ENST00000323853|SNRNP200 30.7034409873982 0.2788461460996952 2 KG{I|L}{M(Oxidation (M))|F}Y 5 5 45.305 0.0 0.0 3.8901 0.0 0.0 538.2875651419 0.0 538.2875651419 0.0 31.81031895404267 0.0 0.0 0 1.1861818737241734 0.0 0.0 0.0 + KG{I|L}{M(Oxidation (M))|F}Y 3.8901 + + 153 1 2.072 62266.7 1.0 4181 3492 7671 DOHH2_400M_050219_2,7675 DOHH2_400M_050219_2,7675,RVDPAKGLFY False True RVDPAKGLFY 42.104432 583.321826159954 8056197.0 7671.0 ENSG00000144028|ENST00000323853|SNRNP200 6.929340680440267 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7676 42.118 800.0 167060.0 25 0 11126.0 -1 0 114 881.9123406423205 1761.8101283514409 2 881.9110595583916 MULTI CID FTMS 0 0 0 7671 194434.171875 1.0 0 0.0 5 2 [NP]{I|L}N{[CA]|SS}A[H{I|L}]EN{I|L}NPNE 16 -1 + 71.248 0.0 0.0 4.044 4.044 51.798 0.0 0.0 0.0 5.150702794114736 5.150702794114736 5.150702794114736 0.0 0 1.510638087671366 0.9208187539523752 0.0 1.1861818737241734 [NP]{I|L}N{[CA]|SS}A[H{I|L}]EN{I|L}NPNE;[NP]{I|L}N{[CA]|SS}[H{I|L}]AEN{I|L}NPNE;[NP]{I|L}N[MN][H{I|L}]EN{I|L}NPNE;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ[{I|L}A]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[NP]{I|L}[C(Carbamidomethyl (C))Q][H{I|L}]AEN{I|L}NPNE;[NP]{I|L}[C(Carbamidomethyl (C))Q]A[H{I|L}]EN{I|L}NPNE;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEARRE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{[CA]|SS}A[H{I|L}]EN{I|L}NPNE;{[QV]|[N{I|L}]|[RA]|[KV]}PN{[CA]|SS}[H{I|L}]AEN{I|L}NPNE;{[QV]|[N{I|L}]|[RA]|[KV]}PN[MN][H{I|L}]EN{I|L}NPNE 4.044;4.044;3.934;3.7517;3.4471;3.4471;3.372;3.1562;3.1562;3.0461 -;-;-;-;-;-;-;-;-;- 974 1 2.072 92592.2 0.8299999833106995 4182 3492 7671 DOHH2_400M_050219_2,7676 DOHH2_400M_050219_2,7676, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7677 42.127 512.0 329780.0 25 0 22557.0 5991 DRKRCEYEW 9 132 642.7912597680277 1283.5679666028552 2 642.7922851443291 MULTI CID FTMS 0 0 0 7671 181473.6875 0.9207417802605754 -1 0.0880241394042968 6 Unmodified _DRKRCEYEW_ ENST00000564901.1_1_16:30886783-30905983:+|nuORF 11.640296217721598 0.521594087909532 2 WNSEHVNGRW 10 9 + 86.169 0.0 0.0 6.7132 6.7132 86.562 0.0 0.0 0.0 6.7780111518825805 18.293037728310253 6.7780111518825805 6.7780111518825805 0 2.261922997584469 0.0 0.4247425010840047 0.9916440611282626 WNSEHVNGRW;[HC]{M(Oxidation (M))|F}EHVNGRW;WNSEHVGGGRW;[HC]{M(Oxidation (M))|F}EHVGGGRW;[HC]{M(Oxidation (M))|F}EHVNG[{I|L}T]Q;{[DA]|[EG]}NSEHVNG[{I|L}T]Q;{[CT]|[{M(Oxidation (M))|F}G]}RGNVHC{M(Oxidation (M))|F}[{M(Oxidation (M))|F}T];[HC]{M(Oxidation (M))|F}EHVGGG[{I|L}T]Q;{[YC]|[HE]}[HK]VHESN[PA];[HC]{M(Oxidation (M))|F}EH[RN]RW 6.7132;6.1851;5.9992;5.4712;4.5533;4.3702;3.9109;3.8422;3.8223;3.5159 -;-;-;-;-;-;-;-;-;- 983 + 1 2.072 126283.6 1.0 4183 3492 7671 DOHH2_400M_050219_2,7677 DOHH2_400M_050219_2,7677,DRKRCEYEW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7678 42.135 409.0 285290.0 25 0 19913.0 + -1 NESEYTVKW 9 158 578.2724534090873 1731.7955308274618 3 578.2698242068291 MULTI CID FTMS 0 0 0 7671 135726.84375 0.7582283513881185 -1 0.0880241394042968 7 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENSG00000151694|ENST00000310823|ADAM17;ENST00000478059.1_1_2:9667906-9695734:-|nuORF;nc|ENSG00000151694|P78536-2|ADAM17 0.0948413911109767 0.8747004676205551 2 SEYTVKW 7 -1 28.166 0.0 0.0 1.6264 0.0 0.0 820.356243533935 0.0 820.356243533935 0.0 10.675121215139589 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 SEYTVKW 1.6264 - 615 + 1 2.072 90140.4 1.0 4184 3492 7671 DOHH2_400M_050219_2,7678 DOHH2_400M_050219_2,7678,RCHRRRRRCCC False False NESEYTVKW 42.13462 578.269824206829 967029.0625 7671.0 ENSG00000151694|ENST00000310823|ADAM17;;ENST00000478059.1_1_2:9667906-9695734:-|nuORF;;nc|ENSG00000151694|P78536-2|ADAM17 6.594650745391846 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7679 42.144 520.0 220700.0 25 0 11275.0 + 8308 EQWVKPMAV 9 159 544.2836098682068 0 544.2830078005791 PEAK CID FTMS 0 0 0 7671 105442.78125 1.0 0 0.0 8 Unmodified _EQWVKPMAV_ ENSG00000197713|ENST00000359429|RPE;ENSG00000235376|ENST00000441178|RPEL1;nc|ENSG00000197713|Q96AT9-2|RPE;nc|ENSG00000197713|Q96AT9-3|RPE;nc|ENSG00000197713|Q96AT9-4|RPE;nc|ENSG00000197713|Q96AT9-5|RPE 54.773552608820026 0.0223190572393154 2 WVKP 4 5 24.993 0.0 0.0 2.3002 0.0 0.0 257.0989235508844 316.13279138736567 573.2317149382501 0.0 0.0 0.0 0.0 0 0.6549471895720984 0.0 0.0 0.0 + WVKP 2.3002 + + 286 + 1 2.072 91741.0 1.0 4185 3492 7671 DOHH2_400M_050219_2,7679 DOHH2_400M_050219_2,7679,EQWVKPMAV True True EQWVKPMAV 42.14378 544.283007800579 502632.8125 7671.0 ENSG00000235376|ENST00000441178|RPEL1;;nc|ENSG00000197713|Q96AT9-4|RPE;;ENSG00000197713|ENST00000359429|RPE;;nc|ENSG00000197713|Q96AT9-5|RPE;;nc|ENSG00000197713|Q96AT9-3|RPE;;nc|ENSG00000197713|Q96AT9-2|RPE 7.594056606292725 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7680 42.158 800.0 163700.0 25 0 11948.0 -1 MLQQLFCQLVY 11 139 701.349350970507 0 701.3518554568291 PEAK CID FTMS 0 0 0 7671 141613.515625 1.0 0 0.0 9 Oxidation (M) _M(Oxidation (M))LQQLFCQLVY_ ENST00000526995.5_1_11:36511020-36511152:-|nuORF 9.38312468134398 0.4559597037863106 2 PRHQ{I|L}ME 7 -1 18.237 0.0 0.0 1.302 0.0 0.0 381.1502267439451 125.07253442935782 506.2227611733029 0.0 0.0 0.0 0.0 0 0.218765315847925 0.0 0.5994850021680094 0.0 PRHQ{I|L}ME 1.302 - 854 + 1 2.072 92954.8 0.7400000095367432 4186 3492 7671 DOHH2_400M_050219_2,7680 DOHH2_400M_050219_2,7680,MLQQLFCQLVY False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7682 42.162 17.0 3411000.0 25 0 166690.0 -1 RCHRRRRRCCC 11 58 866.9070133939276 1731.7994738546552 2 866.9080078005791 MULTI CID FTMS 0 0 0 7681 2840883.5 0.3509815562809527 3 -0.2155876159667968 1 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 2 [MN]PN{I|L}NADQ[QP]AN{I|L} 14 -1 81.073 0.0 0.0 4.6814 0.0 0.0 0.0 208.0734499567016 208.0734499567016 61.12404479047257 0.0 0.0 0.0 0 1.1989700043360187 1.5228787452803376 0.0 0.4247425010840047 [MN]PN{I|L}NADQ[QP]AN{I|L} 4.6814 - 606 + 1 2.072 46453.5 1.0 4187 3493 7681 DOHH2_400M_050219_2,7682 DOHH2_400M_050219_2,7682,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7683 42.176 800.0 194060.0 25 0 15550.0 + 5387 DLKRGMLL 8 166 473.2807132940886 944.5468736549772 2 473.2802307009697 MULTI CID FTMS 0 0 0 7681 85476.0546875 0.6517210338628898 2 -0.1319694519042968 2 Unmodified _DLKRGMLL_ ENSG00000086504|ENST00000199706|MRPL28 32.30548876998284 0.3644845974844379 2 D{I|L}K 3 5 41.559 0.0 0.0 4.3999 0.0 0.0 0.0 585.3228243463499 585.3228243463499 17.57490805844361 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 + D{I|L}K 4.3999 + + 116 + 1 2.072 122385.9 0.4900000095367431 4188 3493 7681 DOHH2_400M_050219_2,7683 DOHH2_400M_050219_2,7683,DLKRGMLL False True DLKRGMLL 42.175974 473.28023070097 899017.1875 7681.0 ENSG00000086504|ENST00000199706|MRPL28 0.3852608998616536 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7684 42.179 123.0 1040200.0 25 0 193710.0 + 5528 DMDRVLLKY 9 97 576.8074849211166 1151.6004169090331 2 576.8075439333916 MULTI CID FTMS 0 0 0 7681 390521.90625 0.2115265517283404 -2 0.1510734558105468 3 Unmodified _DMDRVLLKY_ chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;ENSG00000213999|ENST00000424583|MEF2B;nc|ENSG00000213999|Q02080|MEF2B 70.33199760932243 0.0209706178985989 2 [MD][RD]V{I|L}{I|L}KY 9 0 + 76.256 0.0 0.0 6.6217 6.6217 94.084 0.0 0.0 0.0 27.06006414642259 60.04583947929687 27.06006414642259 30.43157681736544 0 1.8494850021680087 1.5228787452803376 0.3494850021680094 0.91944517631652 + + [MD][RD]V{I|L}{I|L}KY;{[CP]|[EA]}[WM]V{I|L}{I|L}KY;[K{I|L}][PG][DG]K{M(Oxidation (M))|F}KY 6.6217;3.9792;2.5051 +;-;- + 259 1 2.072 99973.6 1.0 4189 3493 7681 DOHH2_400M_050219_2,7684 DOHH2_400M_050219_2,7684,DMDRVLLKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7685 42.189 615.0 328760.0 25 0 26952.0 + 345 AEAPGGELMGY 11 162 547.7446857470077 1093.4748185608153 2 547.7446777224541 MULTI CID FTMS 0 0 0 7681 184171.0625 0.4605447713461509 -3 0.2645759582519531 4 Unmodified _AEAPGGELMGY_ ENSG00000173418|ENST00000334982|NAA20;nc|ENSG00000173418|P61599-2|NAA20 63.960520009940105 0.0530716371881472 2 {[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AEAMGY 10 5 + 70.699 0.0 0.0 6.4655 6.4655 78.866 0.0 0.0 0.0 1.1394335230683623 16.53212513775344 1.1394335230683623 1.1394335230683623 0 1.424742501084005 0.0 1.7346368802282015 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AEAMGY;[NP]E{I|L}AEAMGY;{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}MAEAGY;[NP]E{I|L}MAEAGY;[PG]GE{I|L}AEAMGY;{[CP]|[EA]}VGPAEAMGY;{[QD]|[EN]|[WG]|[KD]|[RS]}PA{I|L}EAMGY;{[QN]|[E{I|L}]|[KN]}NPAEAMGY;[NP]EA{I|L}EAMGY;{[QD]|[EN]|[WG]|[KD]|[RS]}PAAE{I|L}MGY 6.4655;6.3613;6.0623;5.9581;5.944;5.9242;5.824;5.7923;5.7198;5.5976 -;-;-;-;-;-;-;-;-;- 6750 1 2.072 151909.7 1.0 4190 3493 7681 DOHH2_400M_050219_2,7685 DOHH2_400M_050219_2,7685,AEAPGGELMGY True True AEAPGGELMGY 42.189267 547.744677722454 3166694.75 7681.0 nc|ENSG00000173418|P61599-2|NAA20;;ENSG00000173418|ENST00000334982|NAA20 6.124958833058675 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7686 42.196 375.0 201790.0 25 0 7032.1 + + 9292 DSDRDDLKLMAY 12 115 721.3360768475177 1440.6576007618353 2 721.3370239138603 MULTI CID FTMS 0 0 0 7681 103758.53125 0.6790538816651609 -1 0.06304931640625 5 Unmodified _FIDIMYRCFAY_ nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000157212|Q6ZW49-2|PAXIP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF 7.608950283845883 0.8392484121837455 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AK[HC]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}MAY 12 -1 + 62.4 0.0 0.0 4.3314 4.3314 82.392 0.0 0.0 0.0 7.758947927111102 32.22289807887176 7.758947927111102 10.791812460476253 0 1.3494850021680094 2.0 0.4247425010840047 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AK[HC]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}MAY;{[DS]|[MA]|[CV]|TT}{I|L}K[HC]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}MAY 4.3314;3.5823 -;- 178 1 2.072 57843.6 1.0 4191 3493 7681 DOHH2_400M_050219_2,7686 DOHH2_400M_050219_2,7686,FIDIMYRCFAY False False DSDRDDLKLMAY 42.196009 721.33702391386 1887401.6875 7681.0 nc|ENSG00000157212|Q6ZW49-1|PAXIP1;;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;;ENSG00000157212|ENST00000404141|PAXIP1;;nc|ENSG00000157212|Q6ZW49-2|PAXIP1;;ENST00000457196.5_1_7:154735861-154782774:-|nuORF 7.934938112894694 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7687 42.21 800.0 199810.0 25 0 27146.0 39008 TVRTAADLPL 10 151 528.8058511669652 1055.5971494007304 2 528.8071777224541 MULTI CID FTMS 0 0 0 7681 93101.2578125 1.0 0 0.0 6 Unmodified _TVRTAADLPL_ nc|ENSG00000183833|Q7Z4T9-8|CFAP91 18.1463463914782 0.5430639438673815 2 E{I|L} 2 9 21.999 0.0 0.0 2.0841 0.0 0.0 795.4596199591273 0.0 795.4596199591273 0.0 4.335461668602122 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.0 E{I|L} 2.0841 - 446 + 1 2.072 125196.6 0.4799999892711639 4192 3493 7681 DOHH2_400M_050219_2,7687 DOHH2_400M_050219_2,7687,TVRTAADLPL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 7688 42.224 800.0 204470.0 25 0 8456.9 -1 KYYLCFYLFVL 11 155 764.8964694675527 1527.7783860019051 2 764.8942748904228 MULTI CID FTMS 0 0 0 7681 84695.8046875 0.3660168389050444 -2 0.1510734558105468 7 Carbamidomethyl (C) _KYYLC(Carbamidomethyl (C))FYLFVL_ MER57F_dup142|chr6:29552528-29552933:-|5.889111264267852|0.0722232426967899|6.35|48.0|19|3|sense 8.745405648335112 0.8338865417133445 2 {[SA]|[TG]}GPS[WK]PSQSANV{I|L} 15 -1 + 105.93 0.0 0.0 6.9337 6.9337 79.578 0.0 0.0 0.0 8.780673999630864 16.690067809585756 8.780673999630864 0.5415865901876771 0 0.5994850021680094 1.0 3.2658715643802765 0.4247425010840047 {[SA]|[TG]}GPS[WK]PSQSANV{I|L};{[SA]|[TG]}NV[WR]PSQSANV{I|L};{[SA]|[TG]}GGV[WR]PSQSANV{I|L};{[QG]|[NA]}SV[WR]PSQSANV{I|L};{[QS]|[NT]}PS[WK]PSQSANV{I|L};{[SA]|[TG]}GPS[WK]PSQSAGGV{I|L};{[SA]|[TG]}GPS[WK]PS[AG]SANV{I|L};{[SA]|[TG]}NV[WR]PSQSAGGV{I|L};{[SA]|[TG]}NV[WR]PS[AG]SANV{I|L};{[QS]|[NT]}GV[WR]PSQSANV{I|L} 6.9337;6.8983;6.8786;6.359;6.3506;6.3426;6.3426;6.3059;6.3059;6.2955 -;-;-;-;-;-;-;-;-;- 5268 1 2.072 114756.8 0.6200000047683716 4193 3493 7681 DOHH2_400M_050219_2,7688 DOHH2_400M_050219_2,7688,KYYLCFYLFVL False False False False ERV PXD020620_cell_line DOHH2_400M_050219_2 7689 42.23 327.0 208760.0 25 0 27925.0 + 36932 TEVKSLRKE 9 116 545.3165366524856 1088.6185203717712 2 545.3168212771416 MULTI CID FTMS 0 0 0 7681 145801.78125 0.3587710948267264 -12 0.8260345458984375 8 Unmodified _TEVKSLRKE_ REV__ENSG00000176009|ENST00000531618|ASCL3;REV__ENSG00000232237|ENST00000449188|ASCL5;REV__nc|ENSG00000232237|Q7RTU5|ASCL5 3.944395688203298 0.7769873103969335 2 Y 1 -1 13.495 0.0 0.0 1.2396 0.0 0.0 907.5441012817306 0.0 907.5441012817306 0.0 1.901056208558032 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2396 - 71 + 1 2.072 55888.4 1.0 4194 3493 7681 DOHH2_400M_050219_2,7689 DOHH2_400M_050219_2,7689,TEVKSLRKE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7690 42.243 697.0 270300.0 25 0 16556.0 + 24674 MLYFEERHCTL 11 185 481.2255517754336 1440.6548259265007 3 481.2252075076103 MULTI CID FTMS 0 0 0 7681 121218.640625 1.0 0 0.0 9 Unmodified _MLYFEERHCTL_ REV__ENST00000469100.5_1_1:33241584-33246798:-|nuORF 6.2057823575117 0.8458686499021061 2 MRK{I|L}D 5 -1 27.493 0.0 0.0 1.9084 0.0 0.0 209.0652922580253 585.1916597955686 794.256952053594 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3252574989159953 MRK{I|L}D 1.9084 - 557 + 1 2.072 147367.8 1.0 4195 3493 7681 DOHH2_400M_050219_2,7690 DOHH2_400M_050219_2,7690,MLYFEERHCTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7692 42.248 79.0 678020.0 25 0 60128.0 + 42408 VTEEFQPVY 9 92 556.269191630228 1110.5238303272558 2 556.2693969607353 MULTI CID FTMS 0 0 0 7691 597884.9375 0.3647098146103236 3 -0.1401443481445312 1 Unmodified _VTEEFQPVY_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 50.855029805455786 0.0384952370514206 2 EETV{M(Oxidation (M))|F}Q 6 7 46.974 0.0 0.0 4.2299 0.0 0.0 0.0 374.1705880052453 374.1705880052453 17.800084529637985 0.0 0.0 0.0 0 0.5 1.154901959985743 1.4049471895720984 0.0 EETV{M(Oxidation (M))|F}Q 4.2299 - 324 1 2.062 51356.8 1.0 4196 3494 7691 DOHH2_400M_050219_2,7692 DOHH2_400M_050219_2,7692,VTEEFQPVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7693 42.25 79.0 816000.0 25 0 81138.0 21116 LPAPADFLSL 10 74 522.2898839061793 1042.5652148791585 2 522.2902709841728 MULTI CID FTMS 0 0 0 7691 619052.5625 0.2926132361977689 3 -0.1401443481445312 2 Unmodified _LPAPADFLSL_ ENSG00000038358|ENST00000358933|EDC4;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;nc|ENSG00000038358|Q6P2E9-2|EDC4 36.12702656103203 0.1984647928738587 2 {I|L}PD[VP][R{M(Oxidation (M))|F}]S 8 5 50.411 0.0 0.0 4.8353 0.0 0.0 0.0 128.07216821842033 128.07216821842033 29.96584697476848 0.0 0.0 0.0 0 1.079689690656103 1.5228787452803376 0.8494850021680094 0.0 {I|L}PD[VP][R{M(Oxidation (M))|F}]S 4.8353 - 123 + 1 2.062 54521.2 1.0 4197 3494 7691 DOHH2_400M_050219_2,7693 DOHH2_400M_050219_2,7693,LPAPADFLSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7694 42.252 92.0 639180.0 25 0 53951.0 + 29082 QELSGQGWTY 10 92 584.7666764683743 1167.5188000035484 2 584.7672607302666 MULTI CID FTMS 0 0 0 7691 637731.0 1.0 0 0.0 3 Unmodified _QELSGQGWTY_ ENSG00000237649|ENST00000428849|KIFC1 85.64151623876279 0.0124443716933876 2 Y{[SA]|[TG]}GRDATY 9 6 42.299 0.0 0.0 3.623 0.0 0.0 165.08532550422416 0.0 165.08532550422416 0.0 17.560385063328482 0.0 0.0 0 0.6677353201839438 0.0 0.3494850021680094 0.3252574989159953 Y{[SA]|[TG]}GRDATY 3.623 - 564 + 1 2.062 51059.7 1.0 4198 3494 7691 DOHH2_400M_050219_2,7694 DOHH2_400M_050219_2,7694,QELSGQGWTY True True QELSGQGWTY 42.252202 584.767260730267 4657745.0 7691.0 ENSG00000237649|ENST00000428849|KIFC1 7.3781388600667315 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7695 42.257 287.0 171990.0 25 0 15644.0 -1 ALGCLVLLE 9 91 494.2823778453485 986.5502027574968 2 494.2826110720634 MULTI CID FTMS 0 0 0 7691 228473.453125 0.693111405102526 3 -0.1401443481445312 4 Carbamidomethyl (C) _ALGC(Carbamidomethyl (C))LVLLE_ ENSG00000166341|ENST00000299441|DCHS1 5.230669730166228 0.7320841359114558 2 V{I|L}{[QN]|[E{I|L}]|[KN]} 4 -1 13.812 0.0 0.0 1.4001 0.0 0.0 514.2502308576187 0.0 514.2502308576187 0.0 0.3174312876055296 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}{[QN]|[E{I|L}]|[KN]} 1.4001 + + 53 1 2.062 42054.0 1.0 4199 3494 7691 DOHH2_400M_050219_2,7695 DOHH2_400M_050219_2,7695,ALGCLVLLE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7696 42.266 465.0 313910.0 25 0 86798.0 + 31475 RPWLRPAAL 9 105 540.3276704027572 1078.6407878723144 2 540.3277465701103 MULTI CID FTMS 0 0 0 7691 134054.84375 0.8497223735071937 -1 0.0853309631347656 5 Unmodified _RPWLRPAAL_ ENSG00000162073|ENST00000318782|PAQR4;nc|ENSG00000162073|Q8N4S7-2|PAQR4;nc|ENSG00000162073|Q8N4S7-3|PAQR4 38.17557092003332 0.0854718145212029 2 {I|L}EKR[W{I|L}]P 7 8 45.019 0.0 0.0 4.1736 0.0 0.0 0.0 153.07856165103752 153.07856165103752 10.083620394173948 0.0 0.0 0.0 0 1.4204841662593095 2.0 0.0 0.8807196863200843 {I|L}EKR[W{I|L}]P 4.1736 - 172 + 1 2.062 117878.4 1.0 4200 3494 7691 DOHH2_400M_050219_2,7696 DOHH2_400M_050219_2,7696,RPWLRPAAL True True RPWLRPAAL 42.26573 540.32774657011 1223606.5 7691.0 nc|ENSG00000162073|Q8N4S7-3|PAQR4;;ENSG00000162073|ENST00000318782|PAQR4;;nc|ENSG00000162073|Q8N4S7-2|PAQR4 6.202909866968791 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7697 42.271 291.0 255790.0 25 0 17999.0 + 38428 TRNDYVMMY 9 108 596.7597279453036 1191.504902957407 2 596.7606689333916 MULTI CID FTMS 0 0 0 7691 131346.234375 0.1656666223110525 3 -0.1401443481445312 6 Unmodified _TRNDYVMMY_ ENSG00000169180|ENST00000304658|XPO6;nc|ENSG00000169180|Q96QU8-2|XPO6 15.248480904072842 0.4239247793462406 2 YVMMY 5 4 44.949 0.0 0.0 3.7724 0.0 0.0 486.21727187324376 0.0 486.21727187324376 0.0 23.06425027550688 0.0 0.0 0 1.0 0.0 0.0 0.0 + YVMMY 3.7724 + + 351 1 2.062 60383.5 1.0 4201 3494 7691 DOHH2_400M_050219_2,7697 DOHH2_400M_050219_2,7697,TRNDYVMMY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7698 42.285 800.0 449160.0 25 0 26479.0 + 6173 DTDHYFLRY 9 156 615.2828689331391 1228.551184933078 2 615.2817870974541 MULTI CID FTMS 0 0 0 7691 171514.296875 0.2282209382075953 -5 0.4368972778320312 7 Unmodified _DTDHYFLRY_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 104.48436234954404 0.008620177265826 2 DTDHY{M(Oxidation (M))|F}{I|L}RY 9 0 + 112.98 0.0 0.0 9.1966 9.1966 90.61 0.0 0.0 0.0 31.841896413063537 7.117129053615088 7.117129053615088 7.117129053615088 0 2.5253187046026264 2.0 0.3494850021680094 1.0114393726401687 + + DTDHY{M(Oxidation (M))|F}{I|L}RY;DTDHY{M(Oxidation (M))|F}{I|L}YR;DTDYH{M(Oxidation (M))|F}{I|L}RY;DTYDH{M(Oxidation (M))|F}{I|L}RY;DTDYH{M(Oxidation (M))|F}{I|L}YR;DTYDH{M(Oxidation (M))|F}{I|L}YR;YDTDH{M(Oxidation (M))|F}{I|L}RY;DTDH[TP][QP]RY;DYTDH{M(Oxidation (M))|F}{I|L}RY;YDTDH{M(Oxidation (M))|F}{I|L}YR 9.1966;8.6173;8.2959;7.9368;7.7166;7.3575;6.6047;6.4479;6.3343;6.0254 +;-;-;-;-;-;-;-;-;- + 1720 + 1 2.062 259789.9 0.7300000190734863 4202 3494 7691 DOHH2_400M_050219_2,7698 DOHH2_400M_050219_2,7698,DTDHYFLRY True True DTDHYFLRY 42.284913 615.281787097454 17917358.0 7691.0 nc|ENSG00000124155|Q969N2-6|PIGT;;nc|ENSG00000124155|Q969N2-3|PIGT;;nc|ENSG00000124155|Q969N2-4|PIGT;;ENSG00000124155|ENST00000279036|PIGT;;nc|ENSG00000124155|Q969N2-5|PIGT 8.541804949442545 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7699 42.289 242.0 276860.0 25 0 44685.0 + 16956 KIPALTAA 8 96 392.7486243915319 783.4826958498637 2 393.2502014040947 MULTI CID FTMS 0 0 0 7691 153018.5625 0.3311580278901868 3 -0.1401443481445312 8 Unmodified _KIPALTAA_ REV__ENST00000531207.5_1_11:76119663-76122142:+|nuORF 2.302733041254933 0.8103549651115762 2 Y 1 -1 3.9794 0.0 0.0 0.50791 0.0 0.0 541.3664066426356 76.02501093082265 617.3914175734583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.50791 - 18 + 1 2.062 59691.6 1.0 4203 3494 7691 DOHH2_400M_050219_2,7699 DOHH2_400M_050219_2,7699,KIPALTAA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7701 42.294 26.0 2664100.0 25 0 341050.0 + 36815 TEIGIRSGW 9 72 509.7694119020393 1017.5242708708786 2 509.7697326540947 MULTI CID FTMS 0 0 0 7700 1785724.5 0.3043929606876183 3 -0.1348915100097656 1 Unmodified _TEIGIRSGW_ ENSG00000189233|ENST00000413272|NUGGC 29.84058131909904 0.1515068451768857 2 {I|L}G{I|L}[DP] 5 6 32.218 0.0 0.0 3.1664 0.0 0.0 504.2456892513856 0.0 504.2456892513856 0.0 19.744237387763093 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}G{I|L}[DP] 3.1664 - 48 1 2.062 57458.1 1.0 4204 3495 7700 DOHH2_400M_050219_2,7701 DOHH2_400M_050219_2,7701,TEIGIRSGW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7702 42.295 32.0 1606100.0 25 0 76040.0 -1 0 65 873.9148948428956 1745.815236752591 2 873.9153320193291 MULTI CID FTMS 0 0 0 7700 1455463.25 0.3911626585703403 3 -0.1348915100097656 2 2 [MN]PN{I|L}GGEAQ{I|L}AE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 16 -1 + 99.728 0.0 0.0 5.7124 5.7124 79.804 0.0 0.0 0.0 80.02156305217312 9.94972548463494 9.94972548463494 3.6991128507179374 0 0.6747425010840047 1.5228787452803376 0.0 0.75 [MN]PN{I|L}GGEAQ{I|L}AE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}NEAQ{I|L}AE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}GGEAQA{I|L}E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}GWAQ{I|L}AE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}GWAQ{I|L}A[C(Carbamidomethyl (C))M]{I|L}Q;[MN]PN{I|L}NEAQA{I|L}E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PGG{I|L}GGEAQ{I|L}AE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}GGEA[AG]{I|L}AE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}GWAQA{I|L}E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PGG{I|L}NEAQ{I|L}AE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 5.7124;5.5005;5.4391;5.3281;5.2272;5.2272;5.1961;5.1961;5.0548;4.9832 -;-;-;-;-;-;-;-;-;- 2734 + 1 2.062 40986.3 1.0 4205 3495 7700 DOHH2_400M_050219_2,7702 DOHH2_400M_050219_2,7702, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7703 42.297 83.0 761460.0 25 0 167850.0 + 37658 TLLWLAER 8 89 501.290428884807 1000.566304836414 2 501.2907287478447 MULTI CID FTMS 0 0 0 7700 664686.4375 0.6465438120004438 2 -0.093505859375 3 Unmodified _TLLWLAER_ REV__ENSG00000179698|ENST00000323662|WDR97;REV__ENST00000533108.1_1_8:145164641-145165891:+|nuORF;REV__nc|ENSG00000179698|A6NE52-2|WDR97 4.75600775471527 0.7954636275367004 2 M 1 -1 0.3786 0.0 0.0 0.037839 0.0 0.0 671.4413181194203 195.0669344537719 866.5082525731922 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.037839 - 5 + 1 2.062 54753.4 1.0 4206 3495 7700 DOHH2_400M_050219_2,7703 DOHH2_400M_050219_2,7703,TLLWLAER False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7704 42.301 201.0 556430.0 25 0 59794.0 + 6552 EALKKLIL 8 127 464.3155603760029 926.6165678188056 2 464.3156616091728 MULTI CID FTMS 0 0 0 7700 356796.8125 0.3992488699865016 2 -0.093505859375 4 Unmodified _EALKKLIL_ ENSG00000104738|ENST00000649973|MCM4 64.23631603340823 0.116217441302575 2 EA{I|L}KK{I|L}{I|L}{I|L} 8 0 + 49.295 0.0 0.0 5.3199 5.3199 89.533 0.0 0.0 0.0 28.884030681983788 14.904630595263413 14.904630595263413 33.20230047379489 0 0.9731975075880328 1.5228787452803376 0.0 0.0 + + EA{I|L}KK{I|L}{I|L}{I|L};{I|L}{I|L}KK{[CP]|[EA]}{I|L}{I|L};[K{I|L}]K{I|L}{[CP]|[EA]}{I|L}{I|L};KK{I|L}{I|L}{[CP]|[EA]}{I|L}{I|L};{I|L}{I|L}K{[QS]|[NT]}{I|L}{I|L}{I|L};KK{I|L}{[CP]|[EA]}{I|L}{I|L}{I|L};[K{I|L}]K{[CP]|[EA]}{I|L}{I|L}{I|L};[K{I|L}]EAK{I|L}{I|L}{I|L};{I|L}{I|L}[SG]AK{I|L}{I|L}{I|L};[K{I|L}]{I|L}K{[CP]|[EA]}{I|L}{I|L} 5.3199;1.7367;1.7078;1.7078;1.4365;1.4076;1.4076;1.1302;1.0198;0.84753 +;-;-;-;-;-;-;-;-;- + 338 + 1 2.062 92092.3 1.0 4207 3495 7700 DOHH2_400M_050219_2,7704 DOHH2_400M_050219_2,7704,EALKKLIL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7705 42.309 462.0 321650.0 25 0 25438.0 + 43804 YEVEIDGKTY 10 142 608.7900816199875 1215.565610306775 2 608.7903930544853 MULTI CID FTMS 0 0 0 7700 193828.171875 0.0743062084011124 5 -0.1868782043457031 5 Unmodified _YEVEIDGKTY_ ENSG00000111142|ENST00000323666|METAP2;nc|ENSG00000111142|P50579-2|METAP2;nc|ENSG00000111142|P50579-3|METAP2 79.42699986076722 0.0175374121712975 2 YEVE{I|L}DKGTY 10 2 + 120.8 0.0 0.0 9.9381 9.9381 84.004 0.0 0.0 0.0 71.72728434065397 22.05066822622348 22.05066822622348 1.249387366082999 0 1.8494850021680087 1.6989700043360187 2.642642683904553 0.0 YEVE{I|L}DKGTY;YEVE{I|L}DGKTY;YEVE{I|L}[KS]GEY;{NN|[MP]|[D{I|L}]|[EV]}EGKTVYEY;{NN|[MP]|[D{I|L}]|[EV]}EGKTYVEY;{NN|[MP]|[D{I|L}]|[EV]}[KG]TY{M(Oxidation (M))|F}V[C(Carbamidomethyl (C))N];{NN|[MP]|[D{I|L}]|[EV]}EGKVTYEY;YEV{[WN]|[YH]}[{M(Oxidation (M))|F}V]PY;{NN|[MP]|[D{I|L}]|[EV]}[KG]ETVYEY;{NN|[MP]|[D{I|L}]|[EV]}[KG]ETYVEY 9.9381;9.8353;7.3129;4.4336;4.4336;4.3868;4.2888;4.2719;4.1801;4.1801 -;+;-;-;-;-;-;-;-;- + 3434 + 1 2.062 108387.8 1.0 4208 3495 7700 DOHH2_400M_050219_2,7705 DOHH2_400M_050219_2,7705,YEVEIDGKTY True True YEVEIDGKTY 42.309206 608.790393054485 49890468.0 7700.0 ENSG00000111142|ENST00000323666|METAP2;;nc|ENSG00000111142|P50579-2|METAP2;;nc|ENSG00000111142|P50579-3|METAP2 7.122953573862712 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7706 42.318 488.0 405350.0 25 0 19474.0 + 6175 DTDHYFLRY 9 151 410.5241803353904 1228.5507116063711 3 410.5242492556572 MULTI CID FTMS 0 0 0 7700 183014.515625 0.4915151540583922 -4 0.2830429077148437 6 Unmodified _DTDHYFLRY_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 63.22749603027936 0.0242951379232427 2 DTDHY{M(Oxidation (M))|F}{I|L}RY 9 0 + 100.8 0.0 0.0 8.2052 8.2052 86.97 0.0 0.0 0.0 31.96272488392665 5.2827377716704405 5.2827377716704405 4.6604298024039394 0 0.9749073637206092 1.6989700043360187 0.9247425010840048 0.3494850021680094 + + DTDHY{M(Oxidation (M))|F}{I|L}RY;DTYDH{M(Oxidation (M))|F}{I|L}RY;DTDHY{M(Oxidation (M))|F}{I|L}YR;DTDYH{M(Oxidation (M))|F}{I|L}RY;DTYDH{M(Oxidation (M))|F}{I|L}YR;DTDYH{M(Oxidation (M))|F}{I|L}YR;DTDHY{M(Oxidation (M))|F}Y{I|L}R;DTDHY{M(Oxidation (M))|F}YR{I|L};DTYDH{M(Oxidation (M))|F}Y{I|L}R;DTDHYY{M(Oxidation (M))|F}{I|L}R 8.2052;7.8258;7.7752;7.7251;7.3958;7.2951;7.1023;6.899;6.723;6.714 +;-;-;-;-;-;-;-;-;- + 641 + 1 2.062 155003.6 1.0 4209 3495 7700 DOHH2_400M_050219_2,7706 DOHH2_400M_050219_2,7706,DTDHYFLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7707 42.332 800.0 306210.0 25 0 15947.0 + 25571 NEYESRSLW 9 205 592.2727373900207 1182.5309218468412 2 592.2728149294853 MULTI CID FTMS 0 0 0 7700 172976.625 0.8327552955785641 -3 0.1950187683105468 7 Unmodified _NEYESRSLW_ ENSG00000117859|ENST00000428468|OSBPL9;nc|ENSG00000117859|Q96SU4-2|OSBPL9;nc|ENSG00000117859|Q96SU4-3|OSBPL9;nc|ENSG00000117859|Q96SU4-4|OSBPL9;nc|ENSG00000117859|Q96SU4-5|OSBPL9;nc|ENSG00000117859|Q96SU4-6|OSBPL9;nc|ENSG00000117859|Q96SU4-7|OSBPL9 84.5221896805406 0.0164210731287474 2 NEYES 5 4 66.253 0.0 0.0 5.6026 0.0 0.0 0.0 557.2855318658811 557.2855318658811 40.5652180107578 0.0 0.0 0.0 0 1.0067180366000754 1.6989700043360187 0.7742275032520141 0.0 + NEYES 5.6026 + + 709 + 1 2.062 177006.8 0.6899999976158142 4210 3495 7700 DOHH2_400M_050219_2,7707 DOHH2_400M_050219_2,7707,NEYESRSLW True True NEYESRSLW 42.33166 592.272814929485 1544095.25 7700.0 nc|ENSG00000117859|Q96SU4-4|OSBPL9;;nc|ENSG00000117859|Q96SU4-2|OSBPL9;;nc|ENSG00000117859|Q96SU4-7|OSBPL9;;ENSG00000117859|ENST00000428468|OSBPL9;;nc|ENSG00000117859|Q96SU4-5|OSBPL9;;nc|ENSG00000117859|Q96SU4-6|OSBPL9;;nc|ENSG00000117859|Q96SU4-3|OSBPL9 7.420687357584636 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7708 42.338 339.0 321630.0 25 0 34942.0 + 18132 KTLSIFME 8 109 484.75980863935695 967.505064345514 2 484.7596618533134 MULTI CID FTMS 0 0 0 7700 165820.71875 0.6149459694873973 -1 0.0466384887695312 8 Unmodified _KTLSIFME_ ENSG00000169967|ENST00000682094|MAP3K2 26.88365393820708 0.4786498634179528 2 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}STK{[QN]|[E{I|L}]|[KN]} 8 5 + 28.695 0.0 0.0 2.9658 2.9658 71.143 0.0 0.0 0.0 11.704868851976542 0.0443219174010778 0.0443219174010778 4.705673779823378 0 0.7742275032520141 0.0 1.110924374808178 0.0 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}STK{[QN]|[E{I|L}]|[KN]};[K{I|L}]{M(Oxidation (M))|F}TS{I|L}EM;[KT]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}EM;{[TV]|[{I|L}S]}[KT]{M(Oxidation (M))|F}{I|L}EM;[K{I|L}]{[MG]|[TS]}{M(Oxidation (M))|F}{I|L}EM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MSTK{[QN]|[E{I|L}]|[KN]};[{I|L}T][KS]{M(Oxidation (M))|F}{I|L}EM;[K{I|L}]{M(Oxidation (M))|F}TSM{[QN]|[E{I|L}]|[KN]};[KT]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}M{[QN]|[E{I|L}]|[KN]};[KT]{[TV]|[{I|L}S]}E{I|L}{[YD]|[{M(Oxidation (M))|F}M]} 2.9658;2.4795;2.4579;2.2492;2.1592;1.9864;1.9381;1.8935;1.8719;1.7163 -;-;-;-;-;-;-;-;-;- 323 + 1 2.062 88698.8 1.0 4211 3495 7700 DOHH2_400M_050219_2,7708 DOHH2_400M_050219_2,7708,KTLSIFME False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7709 42.352 800.0 95957.0 25 0 3283.4 -1 0 112 917.4300142417984 1832.8454755503965 2 917.9314453005792 MULTI CID FTMS 0 0 0 7700 97889.9140625 0.804952750279487 1 -0.0836181640625 9 2 [NP]{I|L}NE{[VA]|[{I|L}G]}[DP]AENNN[WH] 16 -1 + 51.727 0.0 0.0 2.8222 2.8222 65.167 0.0 0.0 0.0 2.3957751657678727 19.05123765425855 2.3957751657678727 0.2632893872234945 0 0.0 1.0457574905606752 0.0 0.0 [NP]{I|L}NE{[VA]|[{I|L}G]}[DP]AENNN[WH];[NP]{I|L}NE{[VA]|[{I|L}G]}[DP]AENNNV[HS];[NP]{I|L}NE{[VA]|[{I|L}G]}[DP]AEN{I|L}D[WH];[NP]{I|L}NE{[VA]|[{I|L}G]}[DP]AEN{I|L}DV[HS];[NP]{I|L}N[W{I|L}][DP]AENNN[WH];[NP]{I|L}NE{[VA]|[{I|L}G]}[WP]ENNN[WH];[NP]{I|L}N[W{I|L}][DP]AENNNV[HS];[NP]{I|L}NE{[VA]|[{I|L}G]}[WP]ENNNV[HS];[NP]{I|L}N[W{I|L}][DP]AEN{I|L}D[WH];[NP]{I|L}NE{[VA]|[{I|L}G]}[WP]EN{I|L}D[WH] 2.8222;2.8079;2.658;2.6436;2.4562;2.4562;2.4409;2.4409;2.2919;2.2919 -;-;-;-;-;-;-;-;-;- 626 1 2.062 53283.2 0.6100000143051147 4212 3495 7700 DOHH2_400M_050219_2,7709 DOHH2_400M_050219_2,7709, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7710 42.365 800.0 231470.0 25 0 8537.7 + 7094 EELYTKKLW 9 191 605.3286474692475 1208.6427420052948 2 605.3280517458916 MULTI CID FTMS 0 0 0 7700 91513.796875 0.9031716499904776 -1 0.0466384887695312 10 Unmodified _EELYTKKLW_ ENSG00000185627|ENST00000532097|PSMD13 60.07390631473393 0.0260411565414776 2 {M(Oxidation (M))|F}[HS]YTKK{I|L}W 9 3 + 53.07 0.0 0.0 4.3909 4.3909 74.987 0.0 0.0 0.0 2.147642715192504 4.208187539523749 2.147642715192504 4.208187539523749 0 0.9247425010840048 0.0 0.0 0.0 {M(Oxidation (M))|F}[HS]YTKK{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}KKTY{I|L}[HC];{M(Oxidation (M))|F}[HS]YTKKW{I|L};[KT]K{I|L}Y{I|L}EEGE;[KT]KY{I|L}{I|L}EEGE;KKT{I|L}Y{I|L}EEGE;EE{I|L}[Q{I|L}][KP]{I|L}[HC];KK{I|L}TY{I|L}EEGE;KKTY{I|L}{I|L}EEGE;[K{I|L}]KTY{I|L}EEGE 4.3909;4.0427;3.1619;2.7669;2.599;2.5136;2.4744;2.4481;2.3457;2.199 -;-;-;-;-;-;-;-;-;- 782 + 1 2.062 128737.5 0.5199999809265137 4213 3495 7700 DOHH2_400M_050219_2,7710 DOHH2_400M_050219_2,7710,EELYTKKLW True True EELYTKKLW 42.365473 605.3304 575647.5 7700.0 ENSG00000185627|ENST00000532097|PSMD13 6.904988447825114 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7711 42.373 338.0 294000.0 25 0 37308.0 + 9453 FLDASGAKLDY 11 114 600.3007213517965 1198.5868897703929 2 600.3010742068291 MULTI CID FTMS 0 0 0 7700 274078.8125 0.255635837206797 4 -0.1513214111328125 11 Unmodified _FLDASGAKLDY_ ENSG00000082153|ENST00000409600|BZW1;ENST00000464483.1_1_2:201677931-201680272:+|nuORF;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1 51.487983226225225 0.1093896055713593 2 {M(Oxidation (M))|F}{I|L}DASQ[K{I|L}]DY 10 2 + 75.214 0.0 0.0 6.2753 6.2753 83.443 0.0 0.0 0.0 5.925452076056075 5.925452076056075 5.925452076056075 5.440680443502757 0 1.424742501084005 0.0 0.7614393726401688 0.4247425010840047 {M(Oxidation (M))|F}{I|L}DASQ[K{I|L}]DY;{M(Oxidation (M))|F}{I|L}DAQS[K{I|L}]DY;[KQ]S{[HG]|PP}QSAD{I|L}E;{M(Oxidation (M))|F}{I|L}DAS[AG][K{I|L}]DY;[KQ]S{[HG]|PP}SQAD{I|L}E;{M(Oxidation (M))|F}{I|L}DAQRRMY;{M(Oxidation (M))|F}{I|L}DA[AG]S[K{I|L}]DY;[KQ]S{[HG]|PP}[AG]SAD{I|L}E;[KQ]S{[HG]|PP}QSADG[KG];[KA]GS{[HG]|PP}QSAD{I|L}E 6.2753;5.8213;5.7809;5.5106;5.327;5.2099;5.0567;5.0193;5.0193;4.8592 -;-;-;+;-;-;-;-;-;- + 2426 + 1 2.062 75558.8 1.0 4214 3495 7700 DOHH2_400M_050219_2,7711 DOHH2_400M_050219_2,7711,FLDASGAKLDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7713 42.378 5.8 10942000.0 25 0 1347800.0 + 35666 SVDPHGFISY 10 87 561.2666909069633 1120.5188288807265 2 561.2672607302666 MULTI CID FTMS 0 0 0 7712 8333614.0 0.5328764306291149 2 -0.0512733459472656 1 Unmodified _SVDPHGFISY_ ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;nc|ENSG00000105197|Q3ZCQ8-3|TIMM50 69.10491478415734 0.0189654488676922 2 [VS]D[HM]{I|L}G{I|L}SY 10 3 + 69.64 0.0 0.0 6.215 6.215 77.406 0.0 0.0 0.0 37.521890713348746 11.505149978319906 11.505149978319906 0.5803717656404217 0 1.6237125054200234 2.0 0.6747425010840047 0.0 [VS]D[HM]{I|L}G{I|L}SY;[VS]DPH{M(Oxidation (M))|F}G{I|L}SY;WDP[NG]{I|L}G{I|L}SY;[VS][HM]D{I|L}G{I|L}SY;[VS][HM]{I|L}DG{I|L}SY;[VS]DP[NG]{I|L}AWY;[VS]D[HM]{I|L}PHW;[VS]D[HM]P{I|L}HW;[VS]DPHM{I|L}HW;[HM]VDS{I|L}G{I|L}SY 6.215;6.1632;5.5662;5.2554;4.9867;4.8308;4.6815;4.4128;4.361;4.2275 -;-;-;-;-;-;-;-;-;- 1423 + 1 2.059 53869.8 1.0 4215 3496 7712 DOHH2_400M_050219_2,7713 DOHH2_400M_050219_2,7713,SVDPHGFISY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7714 42.383 280.0 349160.0 25 0 54660.0 16824 KHVLSERS 8 113 478.2693758599064 954.5241987866128 2 478.2690612673759 MULTI CID FTMS 0 0 0 7712 213349.84375 0.386366676913646 5 -0.1861305236816406 2 Unmodified _KHVLSERS_ ENSG00000105053|ENST00000316763|VRK3;ENST00000594090.5_1_19:50491627-50519408:-|nuORF;ENST00000600284.5_1_19:50490096-50500767:-|nuORF;nc|ENSG00000105053|Q8IV63-2|VRK3;nc|ENSG00000105053|Q8IV63-3|VRK3 7.289230182591677 0.7800870086367542 2 {M(Oxidation (M))|F} 1 8 1.7827 0.0 0.0 0.18677 0.0 0.0 593.3675958586816 211.06150232486564 804.4290981835472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.18677 - 19 + 1 2.059 81237.9 1.0 4216 3496 7712 DOHH2_400M_050219_2,7714 DOHH2_400M_050219_2,7714,KHVLSERS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7716 42.399 800.0 257750.0 25 0 9366.3 -1 0 152 901.41697274086 1800.8193925485198 2 901.922412097454 MULTI CID FTMS 0 0 0 7715 237999.859375 0.827544772306615 -4 0.2254753112792968 1 2 [NP]{I|L}NAD[YK]MAN{I|L}[DP][EP] 16 -1 + 84.655 0.0 0.0 4.7009 4.7009 71.247 0.0 0.0 0.0 17.876965682898742 5.219739756473658 5.219739756473658 0.4850023609038345 0 0.3807196863200844 1.2218487496163564 0.75 1.8098943791441968 [NP]{I|L}NAD[YK]MAN{I|L}[DP][EP];[NP]{I|L}NAD[YK]MY{I|L}{M(Oxidation (M))|F}S[EP];[NP]{I|L}NAD[YK]MAN[HT]S[EP];[NP]{I|L}GGAD[YK]MY{I|L}{M(Oxidation (M))|F}S[EP];[NP]{I|L}NAD[YK]MY{I|L}ES{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NA{[MS]|[{M(Oxidation (M))|F}A]}RYY{I|L}{M(Oxidation (M))|F}S[EP];[NP]{I|L}NM{[SA]|[TG]}RYY{I|L}{M(Oxidation (M))|F}S[EP];[NP]{I|L}NAD[YK]MAN{I|L}DD[HA];[NP]{I|L}NAD[YK]PNVP{M(Oxidation (M))|F}S[EP];[NP]{I|L}NAD[YK]MAN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.7009;4.674;4.5684;4.1725;4.163;4.159;4.1582;4.1432;4.0995;4.0865 -;-;-;-;-;-;-;-;-;- 30475 1 2.059 135156.4 0.8299999833106995 4217 3497 7715 DOHH2_400M_050219_2,7716 DOHH2_400M_050219_2,7716, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7717 42.401 95.0 720290.0 25 0 104390.0 -1 LGPLVGAV 8 100 384.2354898811049 766.4564268290098 2 384.2354919314384 MULTI CID FTMS 0 0 0 7715 448628.5625 0.1389292391661989 6 -0.2950325012207031 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LGPLVGAV_ ENSG00000198814|ENST00000427190|GK;ENSG00000229894|ENST00000505354|GK3;ENST00000328462.7_1_X:101035000-101035489:-|nuORF;ENST00000505994.1_1_4:120314876-120316112:-|nuORF;nc|ENSG00000198814|P32189-1|GK;nc|ENSG00000198814|P32189-2|GK;nc|ENSG00000198814|P32189-4|GK 2.889219685676258 0.8067950007271085 2 {I|L}KY 3 -1 14.922 0.0 0.0 1.9468 0.0 0.0 344.2053719967817 0.0 344.2053719967817 0.0 5.088643834802157 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}KY 1.9468 - 22 + 1 2.059 60890.2 1.0 4218 3497 7715 DOHH2_400M_050219_2,7717 DOHH2_400M_050219_2,7717,LGPLVGAV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7718 42.411 525.0 278180.0 25 0 106630.0 + 11337 GFGILHAP 8 119 406.2250377545 0 406.2252685427666 PEAK CID FTMS 0 0 0 7715 108243.2109375 0.8462182251267331 -1 0.0098876953125 3 Unmodified _GFGILHAP_ REV__ENST00000452143.5_1_1:62902154-62905498:+|nuORF 2.889219685676258 0.5898224805723975 2 D 1 -1 7.1041 0.0 0.0 0.87658 0.0 0.0 576.3345531927907 116.05108057193593 692.3856337647267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 D 0.87658 - 12 + 1 2.059 119317.1 1.0 4219 3497 7715 DOHH2_400M_050219_2,7718 DOHH2_400M_050219_2,7718,GFGILHAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7719 42.424 800.0 93671.0 25 0 4593.1 27154 PFRRNTTWHRV 11 125 735.3986972207271 0 735.5984985232353 PEAK CID FTMS 0 0 0 7715 40700.1484375 1.0 0 0.0 4 Unmodified _PFRRNTTWHRV_ ENSG00000116991|ENST00000674635|SIPA1L2;nc|ENSG00000116991|Q9P2F8-2|SIPA1L2 2.9952420565917617 0.4761840153648598 2 P 1 10 5.4846 0.0 0.0 0.37341 0.0 0.0 1252.655688043213 116.05117975406483 1368.7068677972782 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.37341 + + 69 + 1 2.059 55580.5 0.6200000047683716 4220 3497 7715 DOHH2_400M_050219_2,7719 DOHH2_400M_050219_2,7719,PFRRNTTWHRV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7721 42.429 45.0 1184100.0 25 0 60521.0 -1 RCHRRRRRCCC 11 56 866.9070133939276 1731.7994738546552 2 866.9077026247978 MULTI CID FTMS 0 0 0 7720 1106146.375 0.1366606466516611 8 -0.4507102966308594 1 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 2 [MN]PN{I|L}NAD[RH]MN{I|L} 13 -1 90.949 0.0 0.0 5.2517 0.0 0.0 0.0 208.07332788638908 208.07332788638908 71.0005790304626 0.0 0.0 0.0 0 0.7742275032520141 1.5228787452803376 0.0 1.274227503252014 [MN]PN{I|L}NAD[RH]MN{I|L} 5.2517 - 850 + 1 2.059 41223.3 1.0 4221 3498 7720 DOHH2_400M_050219_2,7721 DOHH2_400M_050219_2,7721,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7722 42.431 81.0 904900.0 25 0 122110.0 + 1192 AIDEDVLRY 9 85 547.2796291330557 1092.5447053329112 2 547.2798950076103 MULTI CID FTMS 0 0 0 7720 329348.65625 0.2642684799375093 -3 0.1348915100097656 2 Unmodified _AIDEDVLRY_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 39.94969957227396 0.0757326808254658 2 [{I|L}A]DEDV{I|L}RY 9 0 + 78.822 0.0 0.0 7.2146 7.2146 96.612 0.0 0.0 0.0 62.04365036222725 14.973024840566469 14.973024840566469 65.14349874539631 0 0.7742275032520141 2.0 0.4247425010840047 0.0 + + [{I|L}A]DEDV{I|L}RY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{I|L}[RV]Y[{I|L}A];{[CP]|[EA]}[RP]HHY[{I|L}A];{[CP]|[EA]}V[PG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KQ] 7.2146;1.252;0.47412;0.31942 +;-;-;- + 244 + 1 2.059 64277.8 1.0 4222 3498 7720 DOHH2_400M_050219_2,7722 DOHH2_400M_050219_2,7722,AIDEDVLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7723 42.441 539.0 225840.0 25 0 14034.0 + 36823 TEKPKFIL 8 145 488.2976231692764 974.5806934053528 2 488.2979003787041 MULTI CID FTMS 0 0 0 7720 88853.8125 0.5373292901820287 -3 0.1348915100097656 3 Unmodified _TEKPKFIL_ ENSG00000159063|ENST00000299626|ALG8;nc|ENSG00000159063|Q9BVK2-2|ALG8 39.957323273325 0.2350051964751539 2 GP{M(Oxidation (M))|F}{I|L}T[SG]{I|L}{I|L} 9 7 32.198 0.0 0.0 3.3038 0.0 0.0 71.07437331367343 0.0 71.07437331367343 0.0 6.2240230840105255 0.0 0.0 0 0.6307196863200843 0.0 0.3807196863200844 0.0 GP{M(Oxidation (M))|F}{I|L}T[SG]{I|L}{I|L} 3.3038 - 494 1 2.059 96113.7 1.0 4223 3498 7720 DOHH2_400M_050219_2,7723 DOHH2_400M_050219_2,7723,TEKPKFIL False True TEKPKFIL 42.440772 488.297900378704 1147757.75 7720.0 ENSG00000159063|ENST00000299626|ALG8;;nc|ENSG00000159063|Q9BVK2-2|ALG8 2.6027676661809287 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7725 42.445 47.0 1756300.0 25 0 340100.0 + 5529 DMDRVLLKY 9 78 576.8074849211166 1151.6004169090331 2 576.8079101443291 MULTI CID FTMS 0 0 0 7724 1181820.625 0.6401342346404725 4 -0.2372169494628906 1 Unmodified _DMDRVLLKY_ chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;ENSG00000213999|ENST00000424583|MEF2B;nc|ENSG00000213999|Q02080|MEF2B 33.4449034751529 0.1114409586740657 2 V{I|L}{I|L}KY 5 4 49.196 0.0 0.0 4.272 0.0 0.0 517.1973744123062 0.0 517.1973744123062 0.0 36.13374936505406 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 + V{I|L}{I|L}KY 4.272 + + 87 1 2.059 68061.5 1.0 4224 3499 7724 DOHH2_400M_050219_2,7725 DOHH2_400M_050219_2,7725,DMDRVLLKY True True DMDRVLLKY 42.445432 576.807910144329 25278042.0 7724.0 chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;;ENSG00000213999|ENST00000424583|MEF2B;;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;;chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;;nc|ENSG00000213999|Q02080|MEF2B 5.959039370218913 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7726 42.45 217.0 385590.0 25 0 9645.7 -1 NVSEAECDMEC 11 95 672.2326836615703 0 672.3030883669853 PEAK CID FTMS 0 0 0 7724 59095.65625 1.0 0 0.0 2 2 Carbamidomethyl (C) _NVSEAEC(Carbamidomethyl (C))DMEC(Carbamidomethyl (C))_ ENSG00000075035|ENST00000547525|WSCD2;nc|ENSG00000075035|Q2TBF2-2|WSCD2 2.9952420565917617 0.4761840153648598 2 YK 2 -1 10.969 0.0 0.0 0.8171 0.0 0.0 685.1167513083277 363.1688021295532 1048.285553437881 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YK 0.8171 - 78 + 1 2.059 64753.2 1.0 4225 3499 7724 DOHH2_400M_050219_2,7726 DOHH2_400M_050219_2,7726,NVSEAECDMEC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7727 42.455 321.0 332390.0 25 0 49940.0 + 14277 IEIENFKSY 9 101 571.7901813210074 1141.5658097088146 2 571.7914916872978 MULTI CID FTMS 0 0 0 7724 201934.515625 0.3442004614335847 -2 0.0578155517578125 3 Unmodified _IEIENFKSY_ ENSG00000072501|ENST00000322213|SMC1A 53.40400417844725 0.0329064971918313 2 {I|L}E{I|L}EN{M(Oxidation (M))|F}KSY 9 0 + 94.848 0.0 0.0 8.3086 8.3086 92.799 0.0 0.0 0.0 59.38039076304327 14.09256854528806 14.09256854528806 9.208187539523747 0 0.8252574989159953 1.6989700043360187 1.055462187404089 0.0 + + {I|L}E{I|L}EN{M(Oxidation (M))|F}KSY;{I|L}E{I|L}EGG{M(Oxidation (M))|F}KSY;{I|L}E{I|L}E[PG]NN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}E{I|L}EN[PG]N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}E{I|L}[PG]ENN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}E{I|L}E[PG]NK{[QD]|[EN]|[WG]|[KD]|[RS]};{I|L}E{I|L}E[PG]{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]};{I|L}E{I|L}[PG]NEN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}E{I|L}EN[PG]K{[QD]|[EN]|[WG]|[KD]|[RS]};{I|L}E{I|L}E[HM]K{[QD]|[EN]|[WG]|[KD]|[RS]} 8.3086;7.502;6.555;6.326;6.1617;6.137;6.0129;5.9219;5.908;5.7538 +;-;-;-;-;-;-;-;-;- + 1995 + 1 2.059 84015.2 1.0 4226 3499 7724 DOHH2_400M_050219_2,7727 DOHH2_400M_050219_2,7727,IEIENFKSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7728 42.469 800.0 198370.0 25 0 18770.0 + 25539 NERYAYEW 8 170 565.7480167745316 1129.4814806158631 2 565.7484008669853 MULTI CID FTMS 0 0 0 7724 101478.6875 1.0 0 0.0 4 Unmodified _NERYAYEW_ ENSG00000275066|ENST00000612223|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;nc|ENSG00000275066|Q9UMZ2-6|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG 62.57269311338072 0.1158273023829763 2 {[DA]|[EG]}GRYAYEW 9 2 + 58.042 0.0 0.0 5.1388 5.1388 74.097 0.0 0.0 0.0 1.16537568150207 16.478174818886373 1.16537568150207 1.16537568150207 0 0.8539171939081173 0.6989700043360187 0.0 1.7530834337684311 {[DA]|[EG]}GRYAYEW;[YE][RN]AYEW;{[DA]|[EG]}{M(Oxidation (M))|F}[QT]AYEW;[WQ][{M(Oxidation (M))|F}T]AYEW;{[CP]|[EA]}[QA]YAYEW;{[CT]|[{M(Oxidation (M))|F}G]}E[QT]AYEW;[MT]TYAYYA{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}M[QT]AYEW;[MT]TYA[QT]EW;[MT]TN{M(Oxidation (M))|F}[RP]TY 5.1388;5.0356;4.0649;3.9578;3.7866;3.7279;3.5008;3.4852;3.4184;3.2462 -;-;-;-;-;-;-;-;-;- 889 1 2.059 124839.0 0.5099999904632568 4227 3499 7724 DOHH2_400M_050219_2,7728 DOHH2_400M_050219_2,7728,NERYAYEW True True NERYAYEW 42.469222 565.748400866985 750272.9375 7724.0 nc|ENSG00000275066|Q9UMZ2-6|SYNRG;;nc|ENSG00000275066|Q9UMZ2-4|SYNRG;;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;;ENSG00000275066|ENST00000612223|SYNRG;;nc|ENSG00000275066|Q9UMZ2-9|SYNRG;;nc|ENSG00000275066|Q9UMZ2-3|SYNRG 6.327407201131185 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7729 42.476 389.0 108730.0 25 0 4284.6 + -1 ECVCWCDWHWM 11 81 777.7730288821505 0 777.7689086794853 PEAK CID FTMS 0 0 0 7724 114978.5 1.0 0 0.0 5 Carbamidomethyl (C) _EC(Carbamidomethyl (C))VCWCDWHWM_ REV__ENST00000477757.5_1_10:96997826-96998342:-|nuORF 1.3295316138638542 0.4761840153648598 2 P 1 -1 4.6041 0.0 0.0 0.29636 0.0 0.0 1337.4042750721148 116.05121790103748 1453.4554929731523 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.29636 - 4 + 1 2.059 31292.8 1.0 4228 3499 7724 DOHH2_400M_050219_2,7729 DOHH2_400M_050219_2,7729,ECVCWCDWHWM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7731 42.493 800.0 150150.0 25 0 4133.8 -1 YRSRMRREMLV 11 137 764.8964694675527 1527.7783860019051 2 764.8969604372978 MULTI CID FTMS 0 0 0 7730 89326.5 0.3860286029642836 5 -0.3024177551269531 1 2 Oxidation (M) _YRSRM(Oxidation (M))RREM(Oxidation (M))LV_ ENSG00000111249|ENST00000261726|CUX2 5.731851221503515 0.8481046878870278 2 {[SA]|[TG]}NVQ[{I|L}T]PSQSANV{I|L} 15 -1 + 90.183 0.0 0.0 5.9029 5.9029 78.249 0.0 0.0 0.0 3.725303688959869 16.690067809585756 3.725303688959869 2.04628427264403 0 0.3054621874040891 0.5528419686577808 2.4489700043360187 0.7302046884880937 {[SA]|[TG]}NVQ[{I|L}T]PSQSANV{I|L};{[SA]|[TG]}NV[WR]PSQSANV{I|L};{[SA]|[TG]}GGVQ[{I|L}T]PSQSANV{I|L};{[QS]|[NT]}GVQ[{I|L}T]PSQSANV{I|L};{[QG]|[NA]}SVQ[{I|L}T]PSQSANV{I|L};{[SA]|[TG]}GGV[WR]PSQSANV{I|L};{[NV]|[RG]}ASQ[{I|L}T]PSQSANV{I|L};{[QS]|[NT]}GV[WR]PSQSANV{I|L};{[QG]|[NA]}SV[WR]PSQSANV{I|L};{[NV]|[RG]}AS[WR]PSQSANV{I|L} 5.9029;5.769;5.7537;5.6591;5.6563;5.6185;5.541;5.5251;5.5224;5.4071 -;-;-;-;-;-;-;-;-;- 3321 1 2.059 83292.6 0.6600000262260437 4229 3500 7730 DOHH2_400M_050219_2,7731 DOHH2_400M_050219_2,7731,YRSRMRREMLV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7732 42.494 81.0 1006200.0 25 0 92579.0 + 8676 EVISKLYAV 9 108 511.2997761888511 1020.5849994445024 2 511.3000976443291 MULTI CID FTMS 0 0 0 7730 608484.6875 0.7775528670986869 -1 0.0355567932128906 2 Unmodified _EVISKLYAV_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 39.957323273325 0.0756908302845263 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[HT]{I|L}{I|L}SG 9 5 53.043 0.0 0.0 5.1973 0.0 0.0 0.0 68.05137048892811 68.05137048892811 20.56292093567873 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.385151878060192 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[HT]{I|L}{I|L}SG 5.1973 - 739 + 1 2.059 66817.0 1.0 4230 3500 7730 DOHH2_400M_050219_2,7732 DOHH2_400M_050219_2,7732,EVISKLYAV True True EVISKLYAV 42.494443 511.300097644329 10391647.0 7730.0 nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 8.27162758509318 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7733 42.504 548.0 419170.0 25 0 31862.0 + 5481 DLRTKGFSL 9 170 518.7935278709266 1035.572502808653 2 518.7932617068291 MULTI CID FTMS 0 0 0 7730 159097.9375 1.0 0 0.0 3 Unmodified _DLRTKGFSL_ ENSG00000014216|ENST00000279247|CAPN1;ENST00000530567.1_1_11:64976762-64977505:+|nuORF 55.24861242081279 0.0288621114503864 2 {NN|[MP]|[D{I|L}]|[EV]}RTKG{M(Oxidation (M))|F}S{I|L} 9 0 + 55.336 0.0 0.0 5.3435 5.3435 76.077 0.0 0.0 0.0 2.1876531584792502 2.1876531584792502 2.1876531584792502 2.1876531584792502 0 1.673877368056628 1.5228787452803376 0.6747425010840047 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}RTKG{M(Oxidation (M))|F}S{I|L};D{I|L}R[KP][HA]S{I|L};{NN|[MP]|[D{I|L}]|[EV]}RTKGS{M(Oxidation (M))|F}{I|L};{I|L}DR[KP][HA]S{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}KG{M(Oxidation (M))|F}S{I|L};D{I|L}RT{[VA]|[{I|L}G]}SK{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{[RE]|[WV]}KGS{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}RTKGT[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}RTK[YQ]{I|L};{I|L}DRT{[VA]|[{I|L}G]}SK{M(Oxidation (M))|F} 5.3435;5.1323;4.8841;4.8768;3.7454;3.3732;3.286;3.1852;3.1525;3.1178 +;-;-;-;-;-;-;-;-;- + 807 1 2.059 176602.3 1.0 4231 3500 7730 DOHH2_400M_050219_2,7733 DOHH2_400M_050219_2,7733,DLRTKGFSL True True DLRTKGFSL 42.504078 518.793261706829 1299199.875 7730.0 ENSG00000014216|ENST00000279247|CAPN1;;ENST00000530567.1_1_11:64976762-64977505:+|nuORF 4.832138856252034 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7734 42.518 800.0 229810.0 25 0 17010.0 + 34625 SPLTKSISL 9 174 473.2840099128561 944.553466892512 2 473.2846862673759 MULTI CID FTMS 0 0 0 7730 120214.078125 0.7101667636791797 -2 0.0519866943359375 4 Unmodified _SPLTKSISL_ ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;nc|ENSG00000170776|Q12802-4|AKAP13 107.09958533191995 0.0072323465566536 2 [PS]{I|L}TKS{I|L}S{I|L} 9 0 + 71.823 0.0 0.0 7.6039 7.6039 84.62 0.0 0.0 0.0 0.2805795300642302 10.266551459643892 0.2805795300642302 3.3226467981605623 0 2.274227503252014 2.0 1.673877368056628 0.0 + + [PS]{I|L}TKS{I|L}S{I|L};[PS]{I|L}TKS{I|L}{I|L}S;[{I|L}P]TSKS{I|L}S{I|L};[VG]{[QN]|[E{I|L}]|[KN]}KS{I|L}S{I|L};[{I|L}P]TSKS{I|L}{I|L}S;[VG]{[QN]|[E{I|L}]|[KN]}KS{I|L}{I|L}S;{[TV]|[{I|L}S]}PTKS{I|L}S{I|L};{[TV]|[{I|L}S]}PTKS{I|L}{I|L}S;[{I|L}T]PSKS{I|L}S{I|L};[PS]{I|L}TK{[WT]|[RM]}{I|L} 7.6039;7.2521;6.4637;6.2997;6.1119;5.9479;5.706;5.3542;5.3321;5.0917 +;-;-;-;-;-;-;-;-;- + 1848 1 2.059 143782.4 0.4799999892711639 4232 3500 7730 DOHH2_400M_050219_2,7734 DOHH2_400M_050219_2,7734,SPLTKSISL True True SPLTKSISL 42.517893 473.284686267376 1098794.375 7730.0 nc|ENSG00000170776|Q12802-2|AKAP13;;ENSG00000170776|ENST00000394518|AKAP13;;nc|ENSG00000170776|Q12802-4|AKAP13 5.285019715627034 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7735 42.532 800.0 241100.0 25 0 20389.0 + 27244 PGRLKLQL 8 142 462.803147396336 923.591741859472 2 462.8027526736259 MULTI CID FTMS 0 0 0 7730 94117.3984375 0.703741170103913 -1 0.0355567932128906 5 Unmodified _PGRLKLQL_ nc|ENSG00000291085|Q9H0A3|TMEM191A 50.855029805455786 0.1352255786796883 2 {I|L}E{I|L}[VP]{I|L}Q 7 6 44.601 0.0 0.0 4.8291 0.0 0.0 0.0 128.07219873599846 128.07219873599846 30.4514825491489 0.0 0.0 0.0 0 1.6307196863200843 0.8860566476931632 0.3252574989159953 1.305462187404089 {I|L}E{I|L}[VP]{I|L}Q 4.8291 - 249 + 1 2.059 152458.4 0.4300000071525574 4233 3500 7730 DOHH2_400M_050219_2,7735 DOHH2_400M_050219_2,7735,PGRLKLQL False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 7736 42.546 800.0 329090.0 25 0 22850.0 -1 0 137 1031.4503151712272 3091.329116113882 3 1032.118701159954 MULTI CID FTMS 0 0 0 7730 132226.375 0.1721550205825477 -2 0.0519866943359375 6 2 [QT]PGYAQTANHA 12 -1 41.191 0.0 0.0 1.3325 0.0 0.0 0.0 1848.756518942896 1848.756518942896 4.632283283275562 0.0 0.0 0.0 0 0.0 0.0 1.416386562212267 1.0044321917401078 [QT]PGYAQTANHA 1.3325 - 131146 1 2.059 168128.0 0.6800000071525574 4234 3500 7730 DOHH2_400M_050219_2,7736 DOHH2_400M_050219_2,7736, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7737 42.559 800.0 268200.0 25 0 8199.0 -1 0 108 754.3647857584184 3013.430037167273 4 754.6127807497978 MULTI CID FTMS 0 0 0 7730 102376.5625 0.7420958428429901 1 -0.0828704833984375 7 2 [MN]PN{I|L} 5 -1 54.521 0.0 0.0 1.8093 0.0 0.0 0.0 2441.144657490146 2441.144657490146 36.716590673155736 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.8494850021680094 [MN]PN{I|L} 1.8093 - 257 + 1 2.059 148655.6 0.6499999761581421 4235 3500 7730 DOHH2_400M_050219_2,7737 DOHH2_400M_050219_2,7737, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7739 42.565 108.0 719120.0 25 0 49367.0 + 6174 DTDHYFLRY 9 89 615.2828689331391 1228.551184933078 2 615.2833129763603 MULTI CID FTMS 0 0 0 7738 416312.90625 0.5539556980579302 2 -0.1187896728515625 1 Unmodified _DTDHYFLRY_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 73.1962812333195 0.0198633909068982 2 DTDHY{M(Oxidation (M))|F}{I|L}RY 9 0 + 99.638 0.0 0.0 8.1102 8.1102 90.262 0.0 0.0 0.0 64.07460183208309 12.587418566968154 12.587418566968154 8.010299956639813 0 1.9361818737241727 1.6989700043360187 0.3494850021680094 0.5 + + DTDHY{M(Oxidation (M))|F}{I|L}RY;DTDYH{M(Oxidation (M))|F}{I|L}RY;[HD]TDY{M(Oxidation (M))|F}{I|L}RY;{[ES]|[DT]|[{I|L}C]}HDY{M(Oxidation (M))|F}{I|L}RY;[HS]EDY{M(Oxidation (M))|F}{I|L}RY;[HD]TSY{[MG]|[TS]}KKY;{[ES]|[DT]|[{I|L}C]}HSY{[MG]|[TS]}KKY;[HS]ESY{[MG]|[TS]}KKY 8.1102;7.4582;4.5904;3.8954;2.9625;1.9632;1.2682;0.33529 +;-;-;-;-;-;-;- + 266 + 1 2.047 62080.0 1.0 4236 3501 7738 DOHH2_400M_050219_2,7739 DOHH2_400M_050219_2,7739,DTDHYFLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7740 42.567 97.0 509700.0 25 0 106010.0 + -1 LVMVVLNVG 9 66 501.290428884807 1000.566304836414 2 501.2906371951103 MULTI CID FTMS 0 0 0 7738 490946.875 0.4775464732604919 8 -0.6599693298339844 2 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))LVM(Oxidation (M))VVLNVG_ REV__ENST00000492112.2_1_1:24305263-24306804:-|nuORF 4.75600775471527 0.7486543447549536 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.047 42225.8 1.0 4237 3501 7738 DOHH2_400M_050219_2,7740 DOHH2_400M_050219_2,7740,LVMVVLNVG False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7741 42.571 179.0 460380.0 25 0 70588.0 + 6029 DSDMQTLVY 9 113 536.2365115844746 1070.458470235749 2 536.2368652224541 MULTI CID FTMS 0 0 0 7738 380304.0625 0.5968204506511225 -2 0.1184272766113281 3 Unmodified _DSDMQTLVY_ ENSG00000149823|ENST00000279281|VPS51 58.6788170122104 0.0268135626297836 2 {[DS]|[MA]|[CV]|TT}DMQT{I|L}VY 9 0 + 44.222 0.0 0.0 4.1311 4.1311 80.073 0.0 0.0 0.0 2.3764301679958777 17.605990592769693 2.3764301679958777 9.208187539523747 0 0.8935078169319297 0.0 1.674742501084005 0.0 + + {[DS]|[MA]|[CV]|TT}DMQT{I|L}VY;{[DS]|[MA]|[CV]|TT}DM[AG]T{I|L}VY;{[DS]|[MA]|[CV]|TT}D[VP][YN]VY;{[DS]|[MA]|[CV]|TT}D[RP][YG]VY;{[DS]|[MA]|[CV]|TT}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WE]VY 4.1311;3.2709;0.53607;0.25485;0.001196 +;-;-;-;- + 282 1 2.047 72377.4 1.0 4238 3501 7738 DOHH2_400M_050219_2,7741 DOHH2_400M_050219_2,7741,DSDMQTLVY True True DSDMQTLVY 42.570842 536.236865222454 3968493.75 7738.0 ENSG00000149823|ENST00000279281|VPS51 8.359256267547607 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7742 42.577 310.0 634190.0 25 0 60132.0 + 26419 NTDPWAGYRY 10 155 621.7805841754958 1241.5466154177916 2 621.7809936404228 MULTI CID FTMS 0 0 0 7738 314876.25 0.3770607564611065 -2 0.1184272766113281 4 Unmodified _NTDPWAGYRY_ ENSG00000164024|ENST00000296411|METAP1;ENST00000510209.5_1_4:99916904-99957225:+|nuORF;ENST00000513199.5_1_4:99943548-99960531:+|nuORF 86.33184430468982 0.0118786207050641 2 {[QS]|[NT]}DPWAGYRY 10 0 + 81.479 0.0 0.0 6.5627 6.5627 84.99 0.0 0.0 0.0 58.80305265260567 11.15917488689631 11.15917488689631 6.020599913279625 0 1.305462187404089 1.6989700043360187 0.0 0.9531198197908842 + + {[QS]|[NT]}DPWAGYRY;{[QS]|[NT]}DPWAYGRY;{[QS]|[NT]}DPWQYRY;{[QS]|[NT]}DPWGAYRY;{[QS]|[NT]}DPWYAGRY;{[QS]|[NT]}DPWYQRY;{[QS]|[NT]}DP{[DA]|[EG]}GHPRY;{[QS]|[NT]}DY[WQ]PRY;{[QS]|[NT]}DPWGH{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]};{[QS]|[NT]}DP{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}AGRY 6.5627;6.0778;6.0366;5.882;5.451;5.4098;5.1439;4.2336;4.146;4.0861 +;-;-;-;-;-;-;-;-;- + 2070 + 1 2.047 141661.9 1.0 4239 3501 7738 DOHH2_400M_050219_2,7742 DOHH2_400M_050219_2,7742,NTDPWAGYRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7743 42.579 141.0 487990.0 25 0 35841.0 + 8910 FAHPYQYEL 9 98 584.2774360629933 0 584.2772704958916 PEAK CID FTMS 0 0 0 7738 245355.8125 0.80955427108331 -1 0.0828704833984375 5 Unmodified _FAHPYQYEL_ ENSG00000171824|ENST00000376936|EXOSC10;nc|ENSG00000171824|Q01780-2|EXOSC10 21.74664581756881 0.185237546287679 2 EYQH 4 7 19.68 0.0 0.0 1.6871 0.0 0.0 131.099410417952 475.1969088190063 606.2963192369583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 EYQH 1.6871 - 112 + 1 2.047 57182.9 1.0 4240 3501 7738 DOHH2_400M_050219_2,7743 DOHH2_400M_050219_2,7743,FAHPYQYEL False True FAHPYQYEL 42.579386 584.277270495892 2162062.75 7738.0 ENSG00000171824|ENST00000376936|EXOSC10;;nc|ENSG00000171824|Q01780-2|EXOSC10 5.479148546854655 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7744 42.592 752.0 313470.0 25 0 23817.0 + 8414 ESERLLRELY 10 142 436.5702295769341 1306.6888593310025 3 436.5700866580009 MULTI CID FTMS 0 0 0 7738 139446.8125 1.0 0 0.0 6 Unmodified _ESERLLRELY_ ENSG00000070669|ENST00000394308|ASNS;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS 63.22749603027936 0.0281198777558511 2 ESER{I|L}{I|L}RE{I|L}Y 10 0 + 59.973 0.0 0.0 4.5897 4.5897 83.852 0.0 0.0 0.0 18.198047693763783 8.41251590079672 8.41251590079672 12.552725051033056 0 0.7166152729074456 0.9208187539523752 0.3054621874040891 0.2742275032520141 + + ESER{I|L}{I|L}RE{I|L}Y;ESER{I|L}{I|L}REY{I|L};[QA]{I|L}Q{[CA]|SS}{I|L}RE{I|L}Y;ES[KP]R{I|L}{[QS]|[NT]}S{I|L}Y;[QA]{I|L}ER{I|L}{[QS]|[NT]}S{I|L}Y;[QA]{I|L}Q{[WT]|[RM]}RE{I|L}Y;[QA]{I|L}Q{[CA]|SS}{I|L}REY{I|L};ES[KP]R{I|L}{[QS]|[NT]}SY{I|L};[QA]{I|L}ER{I|L}{[QS]|[NT]}SY{I|L};[QA]{I|L}Q{[WT]|[RM]}REY{I|L} 4.5897;3.629;3.0219;2.8731;2.7484;2.5187;2.0613;1.9124;1.7878;1.558 +;-;-;-;-;-;-;-;-;- + 752 + 1 2.047 187759.6 1.0 4241 3501 7738 DOHH2_400M_050219_2,7744 DOHH2_400M_050219_2,7744,ESERLLRELY True True ESERLLRELY 42.5924 436.570086658001 882212.25 7738.0 nc|ENSG00000070669|P08243-2|ASNS;;nc|ENSG00000070669|P08243-3|ASNS;;ENSG00000070669|ENST00000394308|ASNS 5.537617842356364 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7745 42.594 95.0 451190.0 25 0 24227.0 -1 0 59 873.9148948428956 1745.815236752591 2 873.9207641482353 MULTI CID FTMS 0 0 0 7738 651328.625 0.1750476602950739 9 -0.7234153747558594 7 2 [MN]PD{I|L}NQAQA[QP]N{I|L} 14 -1 87.432 0.0 0.0 5.0081 0.0 0.0 0.0 208.0734804742797 208.0734804742797 63.2107918022669 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.7302046884880937 [MN]PD{I|L}NQAQA[QP]N{I|L} 5.0081 - 434 + 1 2.047 35380.8 1.0 4242 3501 7738 DOHH2_400M_050219_2,7745 DOHH2_400M_050219_2,7745, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7746 42.608 800.0 302620.0 25 0 19720.0 + 26374 NSYWVGEDSTY 11 108 660.7726891365044 1319.5308253398086 2 660.7744018435478 MULTI CID FTMS 0 0 0 7738 195351.5 0.2605598843395091 -2 0.1184272766113281 8 Unmodified _NSYWVGEDSTY_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 85.76441949171179 0.0033696626484081 2 [NS]YWVGED 8 3 69.801 0.0 0.0 5.2898 0.0 0.0 0.0 366.12723438080576 366.12723438080576 30.70311175005673 0.0 0.0 0.0 0 1.5010912013506124 0.0 0.9436726795685344 1.4742887089386454 + [NS]YWVGED 5.2898 + + 4699 1 2.047 179704.4 0.7900000214576721 4243 3501 7738 DOHH2_400M_050219_2,7746 DOHH2_400M_050219_2,7746,NSYWVGEDSTY True True NSYWVGEDSTY 42.608329 660.774401843548 10273129.0 7738.0 ENST00000490223.1_1_3:23959920-23960989:+|nuORF;;ENSG00000174748|ENST00000307839|RPL15;;ENST00000436146.1_1_3:23959450-23960989:+|nuORF 9.752704620361328 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7747 42.617 501.0 184720.0 25 0 25515.0 12869 GVVRMKGLW 9 114 523.3030520939583 1044.5915512547165 2 523.3050414919853 MULTI CID FTMS 0 0 0 -1 0 9 Unmodified _GVVRMKGLW_ nc|ENSG00000185332|Q8N8V8|TMEM105 5.230669730166228 0.7320841359114558 2 W 1 8 11.594 0.0 0.0 1.1099 0.0 0.0 840.5012325064728 0.0 840.5012325064728 0.0 0.1738105312960591 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 1.1099 + + 38 + 1 2.047 77912.1 1.0 4244 3501 7738 DOHH2_400M_050219_2,7747 DOHH2_400M_050219_2,7747,GVVRMKGLW False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 7748 42.624 369.0 121640.0 25 0 7644.0 9400 FIVLFSVY 8 88 494.2823778453485 986.5502027574968 2 494.2830078005791 MULTI CID FTMS 0 0 0 7738 120479.296875 0.3654935555996911 10 -0.7997817993164062 10 Unmodified _FIVLFSVY_ ENSG00000164181|ENST00000508821|ELOVL7 9.347437153973935 0.7675937258251505 2 [{I|L}T]{[WN]|[YH]}V{I|L}{[QN]|[E{I|L}]|[KN]} 8 7 + 23.433 0.0 0.0 2.3753 2.3753 78.839 0.0 0.0 0.0 11.126138210185772 11.443569497791302 11.126138210185772 16.320232147054053 0 0.0 1.154901959985743 0.0 0.0 [{I|L}T]{[WN]|[YH]}V{I|L}{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}[WQ]V{I|L}{[QN]|[E{I|L}]|[KN]};{[CP]|[EA]}[WK]V{I|L}{[QN]|[E{I|L}]|[KN]} 2.3753;0.721;0.042874 -;-;- 71 1 2.047 42392.6 1.0 4245 3501 7738 DOHH2_400M_050219_2,7748 DOHH2_400M_050219_2,7748,FIVLFSVY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7749 42.632 458.0 102480.0 25 0 10161.0 -1 DAMFRTCMTDF 11 84 705.778091579427 0 705.9138061404228 PEAK CID FTMS 0 0 0 -1 0 11 Carbamidomethyl (C),Oxidation (M) _DAMFRTC(Carbamidomethyl (C))M(Oxidation (M))TDF_ ENSG00000076555|ENST00000338432|ACACB;nc|ENSG00000076555|O00763-2|ACACB;nc|ENSG00000076555|O00763-3|ACACB 1.3295316138638542 0.4761840153648598 2 C 1 -1 4.6041 0.0 0.0 0.32664 0.0 0.0 945.3686698758478 358.1329439752563 1303.501613851104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.32664 + + 7 + 1 2.047 38271.9 1.0 4246 3501 7738 DOHH2_400M_050219_2,7749 DOHH2_400M_050219_2,7749,DAMFRTCMTDF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7751 42.637 51.0 1059800.0 25 0 129390.0 + 35667 SVDPHGFISY 10 75 561.2666909069633 1120.5188288807265 2 561.2668945193291 MULTI CID FTMS 0 0 0 7750 1013092.0625 0.0647801640637169 8 -0.6509895324707031 1 Unmodified _SVDPHGFISY_ ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;nc|ENSG00000105197|Q3ZCQ8-3|TIMM50 71.92227651296345 0.0188747003512554 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}S[DV]SY 10 6 + 62.616 0.0 0.0 5.5881 5.5881 81.723 0.0 0.0 0.0 6.158401914925861 6.158401914925861 6.158401914925861 6.158401914925861 0 0.5 0.0 2.3001648626366045 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}S[DV]SY;[HM][DV]S{I|L}G{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}D[VS]{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}D[VS]SY;[WD]P[NG]{I|L}G{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}[PG]{M(Oxidation (M))|F}{I|L}SY;{[HG]|PP}P{M(Oxidation (M))|F}{I|L}S[DV]SY;[HM][DV]S{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;[VS]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TA]{M(Oxidation (M))|F}{I|L}SY;[HM][VS]D{I|L}G{I|L}SY 5.5881;5.0385;4.9404;4.6718;4.6077;4.5853;4.3202;4.2387;4.2195;4.1222 -;-;-;-;-;-;-;-;-;- 1038 1 2.027 47963.8 1.0 4247 3502 7750 DOHH2_400M_050219_2,7751 DOHH2_400M_050219_2,7751,SVDPHGFISY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7752 42.642 291.0 203490.0 25 0 11311.0 + 6176 DTDHYFLRY 9 91 410.5241803353904 1228.5507116063711 3 410.5243102908134 MULTI CID FTMS 0 0 0 7750 130093.6171875 0.3493875011802226 3 -0.1471214294433593 2 Unmodified _DTDHYFLRY_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 27.22323531849824 0.1848086127304535 2 {[ES]|[DT]|[{I|L}C]}DHY{M(Oxidation (M))|F}{I|L}RY 9 0 + 51.077 0.0 0.0 4.1575 4.1575 77.48 0.0 0.0 0.0 7.147642715192504 7.501225267834002 7.147642715192504 7.501225267834002 0 0.2215141619232908 0.0 0.4247425010840047 0.0 + + {[ES]|[DT]|[{I|L}C]}DHY{M(Oxidation (M))|F}{I|L}RY;{[ES]|[DT]|[{I|L}C]}DHY{M(Oxidation (M))|F}Y[R{I|L}];{[ES]|[DT]|[{I|L}C]}DHYY{M(Oxidation (M))|F}[R{I|L}];{[ES]|[DT]|[{I|L}C]}DHYY[R{I|L}]{M(Oxidation (M))|F} 4.1575;3.5469;2.978;2.1524 +;-;-;- + 150 + 1 2.027 51192.5 1.0 4248 3502 7750 DOHH2_400M_050219_2,7752 DOHH2_400M_050219_2,7752,DTDHYFLRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7753 42.652 582.0 208790.0 25 0 19277.0 + 6829 EEATFQQIY 9 145 564.7635908622309 1127.5126287912617 2 564.7654296755791 MULTI CID FTMS 0 0 0 7750 124252.5078125 0.7302701329676424 -2 0.1552963256835937 3 Unmodified _EEATFQQIY_ ENSG00000085840|ENST00000371568|ORC1 81.61307344734483 0.0171259190214613 2 EEAT{M(Oxidation (M))|F}QQ{I|L}Y 9 0 + 48.841 0.0 0.0 4.3317 4.3317 78.935 0.0 0.0 0.0 8.528134895032402 8.072420927871988 8.072420927871988 8.528134895032402 0 0.7742275032520141 1.0 2.329689690656103 0.0 + + EEAT{M(Oxidation (M))|F}QQ{I|L}Y;[AG]Q{M(Oxidation (M))|F}{[CA]|SS}QQ{I|L}Y;EEAT{M(Oxidation (M))|F}[AG]Q{I|L}Y;EEAT{M(Oxidation (M))|F}Q[AG]{I|L}Y;[AG]{M(Oxidation (M))|F}Q{[CA]|SS}QQ{I|L}Y;[AG]Q{[CA]|SS}{M(Oxidation (M))|F}QQ{I|L}Y;[AG]Q{M(Oxidation (M))|F}T[NS]Q{I|L}Y;[AG]{M(Oxidation (M))|F}QT[NS]Q{I|L}Y;EEAT{M(Oxidation (M))|F}Q[YG][{I|L}A];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQ{[CA]|SS}QAW 4.3317;3.5754;3.5151;3.5151;3.4216;3.3311;3.2654;3.1116;2.9857;2.8322 +;-;-;-;-;-;-;-;-;- + 3178 1 2.027 95520.2 1.0 4249 3502 7750 DOHH2_400M_050219_2,7753 DOHH2_400M_050219_2,7753,EEATFQQIY True True EEATFQQIY 42.652252 564.765429675579 1039278.25 7750.0 ENSG00000085840|ENST00000371568|ORC1 4.58564551671346 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7754 42.655 145.0 526310.0 25 0 27403.0 + 33000 SENLLGKQF 9 112 518.2764521519316 1034.5383513706631 2 518.2775756716728 MULTI CID FTMS 0 0 0 7750 302665.125 0.6927839635336654 -2 0.1552963256835937 4 Unmodified _SENLLGKQF_ chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;nc|ENSG00000148773|P46013-2|MKI67 61.60191391372663 0.0251951588191061 2 {[ES]|[DT]|[{I|L}C]}N{I|L}{I|L}GKQ{M(Oxidation (M))|F} 9 0 + 64.725 0.0 0.0 6.2564 6.2564 88.29 0.0 0.0 0.0 41.68727389736722 13.46787486224656 13.46787486224656 9.208187539523747 0 2.138210492164445 0.0 0.0 0.7302046884880937 + + {[ES]|[DT]|[{I|L}C]}N{I|L}{I|L}GKQ{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GG{I|L}{I|L}GKQ{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}N{I|L}{I|L}GK[AG]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GG{I|L}{I|L}GK[AG]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}N{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[DA]|[EG]}{I|L}GKQ{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GG{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[DA]|[EG]}{I|L}GK[AG]{M(Oxidation (M))|F};[KG]{I|L}QVQ{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F};[KG]Q{I|L}VQ{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F} 6.2564;5.3663;5.0285;4.1427;3.6333;3.5501;2.7432;2.3222;1.7465;1.6818 +;-;-;-;-;-;-;-;-;- + 370 + 1 2.027 64494.6 1.0 4250 3502 7750 DOHH2_400M_050219_2,7754 DOHH2_400M_050219_2,7754,SENLLGKQF True True SENLLGKQF 42.655173 518.277575671673 2792192.75 7750.0 nc|ENSG00000148773|P46013-2|MKI67;;ENSG00000148773|ENST00000368654|MKI67;;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67 6.502243359883626 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7755 42.669 800.0 198020.0 25 0 20085.0 + 21847 IPYPRPIHL 9 161 553.8307324203479 1105.6469119074957 2 553.8311645388603 MULTI CID FTMS 0 0 0 7750 195184.359375 0.6802168604578981 -3 0.1908531188964843 5 Unmodified _LPPDLPVSLR_ ENSG00000102897|ENST00000567954|LYRM1 10.073929032068715 0.6785112666868882 2 PY 2 9 14.239 0.0 0.0 1.2879 0.0 0.0 114.08540175300192 728.4232629628042 842.5086647158062 0.0 0.0 0.0 0.0 0 0.4775237221401505 0.0 0.0 0.0 PY 1.2879 - 604 + 1 2.027 123351.2 0.699999988079071 4251 3502 7750 DOHH2_400M_050219_2,7755 DOHH2_400M_050219_2,7755,LPPDLPVSLR False False IPYPRPIHL 42.669006 553.83116453886 3051012.5 7750.0 ENSG00000102897|ENST00000567954|LYRM1 4.524188200632731 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7756 42.678 532.0 135600.0 25 0 21023.0 + -1 VLPEHVSVL 9 94 497.2888443598585 496.2815678932585 1 497.2895385622978 MULTI CID FTMS 0 0 0 7750 144406.0 0.6590469431635563 -2 0.1552963256835937 6 ENSG00000178567|ENST00000322716|EPM2AIP1 2 {M(Oxidation (M))|F} 1 -1 13.979 0.0 0.0 2.8168 0.0 0.0 331.2018845209913 0.0 331.2018845209913 0.0 -3.7236374744834713 -3.7236374744834713 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.8168 - 34 + 1 2.027 59478.0 1.0 4252 3502 7750 DOHH2_400M_050219_2,7756 DOHH2_400M_050219_2,7756, False False VLPEHVSVL 42.678362 497.289538562298 769578.5 7750.0 ENSG00000178567|ENST00000322716|EPM2AIP1 3.505756934483846 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7758 42.692 685.0 195120.0 25 0 7268.2 -1 0 125 901.41697274086 1800.8193925485198 2 901.4182617068292 MULTI CID FTMS 0 0 0 7757 238407.6875 0.7020932172443141 1 -0.0332298278808593 1 2 [MN]PN{I|L}NAD{[VA]|[{I|L}G]}HDY{I|L}{[QS]|[NT]} 16 -1 + 96.941 0.0 0.0 5.3832 5.3832 81.632 0.0 0.0 0.0 71.08984766782105 2.9881610466492816 2.9881610466492816 6.709412807357751 0 1.5501648626366045 1.5228787452803376 0.3494850021680094 1.5986198691406326 [MN]PN{I|L}NAD{[VA]|[{I|L}G]}HDY{I|L}{[QS]|[NT]};[MN]PN{I|L}NW{[VA]|[{I|L}G]}HDY{I|L}{[QS]|[NT]};[MN]PGG{I|L}NAD{[VA]|[{I|L}G]}HDY{I|L}{[QS]|[NT]};[MN]PN{I|L}GGAD{[VA]|[{I|L}G]}HDY{I|L}{[QS]|[NT]};[MN]PN{I|L}NA{[RE]|[WV]}HDY{I|L}{[QS]|[NT]};[MN]PN{I|L}NADQQ[WK]Q{[QS]|[NT]};[MN]PN{I|L}NAD{[VA]|[{I|L}G]}HDYK{[CP]|[EA]};[MN]PN{I|L}GGW{[VA]|[{I|L}G]}HDY{I|L}{[QS]|[NT]};[MN]PGG{I|L}NW{[VA]|[{I|L}G]}HDY{I|L}{[QS]|[NT]};[NP]{I|L}NADH{[VA]|[{I|L}G]}DY{I|L}{M(Oxidation (M))|F}V[DV] 5.3832;5.0106;4.8826;4.8826;4.8165;4.5479;4.5238;4.5091;4.5091;4.385 -;-;-;-;-;-;-;-;-;- 5545 + 1 2.027 92559.5 1.0 4253 3503 7757 DOHH2_400M_050219_2,7758 DOHH2_400M_050219_2,7758, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7759 42.698 297.0 233720.0 25 0 4317.7 + -1 PEEKMECHDLD 11 81 709.7812672715874 0 709.9055053591728 PEAK CID FTMS 0 0 0 7757 29628.2578125 0.7939817691096542 -1 0.0463638305664062 2 Carbamidomethyl (C),Oxidation (M) _PEEKM(Oxidation (M))EC(Carbamidomethyl (C))HDLD_ REV__ENST00000339094.5_1_15:85081807-85112930:-|nuORF;REV__ENST00000354771.8_1_15:85081845-85089490:-|nuORF;REV__ENST00000559010.1_1_15:85081807-85085521:-|nuORF 1.3295316138638542 0.4761840153648598 2 Y 1 -1 3.9794 0.0 0.0 0.28072 0.0 0.0 1056.3916228226683 195.0783175104125 1251.4699403330808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.28072 - 11 + 1 2.027 52723.8 1.0 4254 3503 7757 DOHH2_400M_050219_2,7759 DOHH2_400M_050219_2,7759,PEEKMECHDLD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7760 42.712 800.0 269400.0 25 0 37520.0 + 33828 SLDVGGPLRY 10 139 538.7904762877445 1075.5663996422888 2 538.7897827029228 MULTI CID FTMS 0 0 0 7757 121283.7421875 0.0556107014226647 -3 0.20166015625 3 Unmodified _SLDVGGPLRY_ ENSG00000176894|ENST00000317479|PXMP2 88.95385435242217 0.009729780394035 2 {[TV]|[{I|L}S]}DVGG[{I|L}P]RY 10 0 + 79.205 0.0 0.0 7.364 7.364 92.503 0.0 0.0 0.0 17.971062485323515 9.719712763997563 9.719712763997563 9.58674701179433 0 1.274227503252014 2.0 0.3807196863200844 0.9802046884880936 + + {[TV]|[{I|L}S]}DVGG[{I|L}P]RY;{[TV]|[{I|L}S]}DVN[{I|L}P]RY;{[TV]|[{I|L}S]}DVGY[RV][PA];{[TV]|[{I|L}S]}DVGY{[QV]|[N{I|L}]|[RA]|[KV]}[VP];{[TV]|[{I|L}S]}DVGY[R{I|L}][PG];{[TV]|[{I|L}S]}DVYG[RV][PA];{[TV]|[{I|L}S]}DV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG]T{I|L};{[TV]|[{I|L}S]}DVYG{[QV]|[N{I|L}]|[RA]|[KV]}[VP];{[TV]|[{I|L}S]}DRY[TP][KP];{[TV]|[{I|L}S]}DVYG[R{I|L}][PG] 7.364;6.4727;6.4603;5.8105;5.7599;5.6166;5.412;4.9667;4.9233;4.9162 +;-;-;-;-;-;-;-;-;- + 1440 + 1 2.027 163705.1 0.5600000023841858 4255 3503 7757 DOHH2_400M_050219_2,7760 DOHH2_400M_050219_2,7760,SLDVGGPLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7762 42.717 72.0 798370.0 25 0 143390.0 + 1193 AIDEDVLRY 9 69 547.2796291330557 1092.5447053329112 2 547.2801391482353 MULTI CID FTMS 0 0 0 7761 685847.1875 0.5503219468806955 3 -0.3077507019042969 1 Unmodified _AIDEDVLRY_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 47.74868867922204 0.0453060283459952 2 [{I|L}A]DEDV{I|L}RY 9 0 + 84.614 0.0 0.0 7.7447 7.7447 97.272 0.0 0.0 0.0 64.49092531119419 12.98332479720628 12.98332479720628 49.67584314246003 0 0.9247425010840048 2.0 0.7742275032520141 0.0 + + [{I|L}A]DEDV{I|L}RY;[W{I|L}]EDV[{I|L}V]GY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DV[R{I|L}]Y[{I|L}A] 7.7447;3.1979;1.4052 +;-;- + 78 + 1 2.008 52523.3 1.0 4256 3504 7761 DOHH2_400M_050219_2,7762 DOHH2_400M_050219_2,7762,AIDEDVLRY True True AIDEDVLRY 42.716662 547.280139148235 16372615.0 7761.0 nc|ENSG00000100023|Q13356-2|PPIL2;;ENSG00000100023|ENST00000398831|PPIL2 7.307084560394287 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7763 42.719 108.0 599560.0 25 0 106500.0 + 25943 NLPAHTVII 9 80 489.2927136572385 976.570874381277 2 489.2920715212822 MULTI CID FTMS 0 0 0 7761 551547.125 1.0 0 0.0 2 Unmodified _NLPAHTVII_ ENSG00000144028|ENST00000323853|SNRNP200 58.6788170122104 0.0268135626297836 2 TV{I|L}N{I|L}{I|L} 6 7 58.677 0.0 0.0 6.0085 0.0 0.0 305.14998061347814 0.0 305.14998061347814 0.0 23.637692371991093 0.0 0.0 0 0.3807196863200844 0.0 1.8494850021680087 0.0 TV{I|L}N{I|L}{I|L} 6.0085 - 459 1 2.008 57412.7 1.0 4257 3504 7761 DOHH2_400M_050219_2,7763 DOHH2_400M_050219_2,7763,NLPAHTVII True True NLPAHTVII 42.718941 489.292071521282 3857041.0 7761.0 ENSG00000144028|ENST00000323853|SNRNP200 3.2945220867792764 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7764 42.723 241.0 278000.0 25 0 40976.0 + 14278 IEIENFKSY 9 90 571.7901813210074 1141.5658097088146 2 571.7905761599541 MULTI CID FTMS 0 0 0 7761 287582.28125 0.4901883840907791 3 -0.3077507019042969 3 Unmodified _IEIENFKSY_ ENSG00000072501|ENST00000322213|SMC1A 38.61474834105838 0.0830609365873449 2 {I|L}E{I|L}EN{M(Oxidation (M))|F}KSY 9 0 + 88.101 0.0 0.0 7.7175 7.7175 91.93 0.0 0.0 0.0 46.89841138438741 14.09256854528806 14.09256854528806 9.208187539523747 0 0.8252574989159953 1.6989700043360187 0.3807196863200844 0.0 + + {I|L}E{I|L}EN{M(Oxidation (M))|F}KSY;{I|L}E{I|L}EGG{M(Oxidation (M))|F}KSY;{I|L}E{I|L}[DG]A{M(Oxidation (M))|F}KSY;{I|L}E{I|L}E[PG]NN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}E{I|L}EN[PG]N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}E{I|L}E[PG]NK{[QD]|[EN]|[WG]|[KD]|[RS]};{I|L}E{I|L}EN[PG]K{[QD]|[EN]|[WG]|[KD]|[RS]};{I|L}E{I|L}E[PG]{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]};{I|L}E[PS]TA{M(Oxidation (M))|F}KSY;{I|L}E{I|L}E[HM]K{[QD]|[EN]|[WG]|[KD]|[RS]} 7.7175;6.9109;6.075;5.6863;5.6863;5.1589;5.1589;5.0495;5.0386;5.0047 +;-;-;-;-;-;-;-;-;- + 1485 + 1 2.008 57171.6 1.0 4258 3504 7761 DOHH2_400M_050219_2,7764 DOHH2_400M_050219_2,7764,IEIENFKSY True True IEIENFKSY 42.723456 571.790576159954 6850179.5 7761.0 ENSG00000072501|ENST00000322213|SMC1A 7.268021742502849 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7765 42.734 592.0 426890.0 25 0 21144.0 + 7916 ELQKRFIL 8 182 523.8220822015685 1045.629611469937 2 523.8231078982353 MULTI CID FTMS 0 0 0 7761 171418.0625 0.3131873088461524 -2 0.0795936584472656 4 Unmodified _ELQKRFIL_ ENSG00000126067|ENST00000373237|PSMB2 92.4914307365334 0.0626417082128876 2 {I|L}EQK 4 6 57.9 0.0 0.0 5.5373 0.0 0.0 0.0 544.3272785938642 544.3272785938642 34.57084386766868 0.0 0.0 0.0 0 0.5649093276264391 2.0 0.3494850021680094 0.3807196863200844 {I|L}EQK 5.5373 - 1181 + 1 2.008 192120.1 1.0 4259 3504 7761 DOHH2_400M_050219_2,7765 DOHH2_400M_050219_2,7765,ELQKRFIL True True ELQKRFIL 42.733827 523.823107898235 3842298.5 7761.0 ENSG00000126067|ENST00000373237|PSMB2 3.465461015701294 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7766 42.748 800.0 255190.0 25 0 18580.0 + -1 MEVEVDGQKF 10 175 591.2782605385646 590.2709840719646 1 591.2770263552666 MULTI CID FTMS 0 0 0 7761 141506.078125 0.6051640137195802 -1 0.0332298278808593 5 ENSG00000165209|ENST00000348403|STRBP;ENSG00000129351|ENST00000588657|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;ENST00000492885.1_1_9:125898316-125898746:-|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906|ILF3;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000165209|Q96SI9-2|STRBP 2 {NN|[MP]|[D{I|L}]|[EV]}ME 4 -1 29.297 0.0 0.0 4.9633 0.0 0.0 0.0 99.05215590576732 99.05215590576732 13.151668842475033 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.7614393726401688 0.0 {NN|[MP]|[D{I|L}]|[EV]}ME 4.9633 - 260 1 2.008 149109.8 0.6700000166893005 4260 3504 7761 DOHH2_400M_050219_2,7766 DOHH2_400M_050219_2,7766, False False MEVEVDGQKF 42.747658 591.277026355267 1560232.625 7761.0 ENSG00000165209|ENST00000348403|STRBP;;ENSG00000129351|ENST00000588657|ILF3;;nc|ENSG00000129351|Q12906-4|ILF3;;ENST00000492885.1_1_9:125898316-125898746:-|nuORF;;nc|ENSG00000129351|Q12906-2|ILF3;;nc|ENSG00000129351|Q12906|ILF3;;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;;nc|ENSG00000129351|Q12906-5|ILF3;;nc|ENSG00000129351|Q12906-3|ILF3;;nc|ENSG00000129351|Q12906-6|ILF3;;nc|ENSG00000165209|Q96SI9-2|STRBP 7.212875525156657 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7767 42.751 195.0 401180.0 25 0 22563.0 -1 RCHRRRRRCCC 11 85 866.9070133939276 1731.7994738546552 2 867.4030639529228 MULTI CID FTMS 0 0 0 7761 471717.125 0.0601333549280344 14 -1.1125984191894531 6 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 2 [NP]{I|L}NM[RH]DAD{I|L}NP[EP] 15 -1 + 93.4 0.0 0.0 5.3932 5.3932 74.14 0.0 0.0 0.0 16.307578903143366 69.48638135581298 16.307578903143366 0.5483121601221086 0 0.4247425010840047 1.0457574905606752 0.7742275032520141 1.110924374808178 [NP]{I|L}NM[RH]DAD{I|L}NP[EP];[NP]{I|L}NA[QP]QDAD{I|L}NP[EP];[NP]{I|L}NA[QP]QDAN{I|L}DP[EP];[NP]{I|L}NM[RH]DW{I|L}NP[EP];[NP]{I|L}NM[RH]WD{I|L}NP[EP];[NP]{I|L}NM[RH]DAD{I|L}GGP[EP];[NP]{I|L}GGM[RH]DAD{I|L}NP[EP];[NP]{I|L}NA[QP][AG]DAD{I|L}NP[EP];[NP]{I|L}GGA[QP]QDAD{I|L}NP[EP];[NP]{I|L}NA[QP]QDAD{I|L}GGP[EP] 5.3932;5.3615;5.0853;5.0069;5.0069;4.8717;4.8717;4.8411;4.8411;4.8411 -;-;-;-;-;-;-;-;-;- 4539 1 2.008 57494.3 1.0 4261 3504 7761 DOHH2_400M_050219_2,7767 DOHH2_400M_050219_2,7767,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7768 42.765 800.0 167530.0 25 0 8386.4 + 32739 SEDDLKTVF 9 169 527.2584700309001 1052.5023871286 2 527.2591430544853 MULTI CID FTMS 0 0 0 7761 109166.8671875 0.8800652363953333 -1 0.0332298278808593 7 Unmodified _SEDDLKTVF_ ENSG00000106344|ENST00000223073|RBM28 43.9818466556824 0.0535980856389242 2 {NN|[MP]|[D{I|L}]|[EV]}SRTD{I|L}AY 9 8 + 58.259 0.0 0.0 5.5353 5.5353 74.679 0.0 0.0 0.0 2.0501870663843462 2.6931168656760605 2.0501870663843462 0.5237875363565792 0 1.5044321917401078 1.154901959985743 0.2614393726401688 0.0 {NN|[MP]|[D{I|L}]|[EV]}SRTD{I|L}AY;{NN|[MP]|[D{I|L}]|[EV]}SRTVEAY;{[ES]|[DT]|[{I|L}C]}DD{I|L}K{I|L}AY;{NN|[MP]|[D{I|L}]|[EV]}SRTD{I|L}S{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}SRTVES{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}VRTD{I|L}AY;{NN|[MP]|[D{I|L}]|[EV]}DKTD{I|L}AY;{[ES]|[DT]|[{I|L}C]}DD{I|L}K{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}VRTVEAY;{NN|[MP]|[D{I|L}]|[EV]}DKTVEAY 5.5353;5.4855;5.3405;5.2794;5.2296;5.134;5.1317;5.0846;5.0842;5.082 -;-;-;-;-;-;-;-;-;- 2682 1 2.008 104224.5 0.5199999809265137 4262 3504 7761 DOHH2_400M_050219_2,7768 DOHH2_400M_050219_2,7768,SEDDLKTVF True True SEDDLKTVF 42.765249 527.259143054485 781271.9375 7761.0 ENSG00000106344|ENST00000223073|RBM28 4.65833314259847 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7769 42.779 800.0 26277.0 25 0 2284.7 -1 0 51 885.2017089724541 0 885.2017089724541 PEAK CID FTMS 0 0 0 -1 0 8 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.008 23294.6 0.7300000190734863 4263 3504 7761 DOHH2_400M_050219_2,7769 DOHH2_400M_050219_2,7769, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7771 42.788 401.0 256820.0 25 0 22489.0 + 8677 EVISKLYAV 9 127 511.2997761888511 1020.5849994445024 2 511.2994872927666 MULTI CID FTMS 0 0 0 7770 179949.859375 0.229949137530329 4 -0.4404220581054687 1 Unmodified _EVISKLYAV_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 25.399314129420983 0.2080152500878129 2 {[TV]|[{I|L}S]}KYA{I|L}N 7 5 46.163 0.0 0.0 4.5232 0.0 0.0 0.0 228.12385377483352 228.12385377483352 26.158197815704085 0.0 0.0 0.0 0 0.0 0.6989700043360187 1.4604093769761874 0.0 {[TV]|[{I|L}S]}KYA{I|L}N 4.5232 - 1003 1 2.008 83138.9 1.0 4264 3505 7770 DOHH2_400M_050219_2,7771 DOHH2_400M_050219_2,7771,EVISKLYAV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7772 42.791 122.0 466220.0 25 0 43648.0 + -1 VMAPRTVLL 9 91 508.2998573973431 1014.5851618614862 2 508.3023254275322 MULTI CID FTMS 0 0 0 7770 257633.421875 0.62563300204857 -1 0.0675277709960937 2 Oxidation (M) _VM(Oxidation (M))APRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;ENST00000498007.1_1_6:31324459-31324935:-|nuORF 29.84058131909904 0.1515068451768857 2 AD{I|L} 3 -1 29.45 0.0 0.0 2.9027 0.0 0.0 697.4485313430619 0.0 697.4485313430619 0.0 10.510299956639813 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 AD{I|L} 2.9027 - 63 1 2.008 48491.6 1.0 4265 3505 7770 DOHH2_400M_050219_2,7772 DOHH2_400M_050219_2,7772,VMAPRTVLL False False VMAPRTVLL 42.790845 508.302325427532 7509044.5 7770.0 ENSG00000234745|ENST00000412585|HLA-B;;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;;ENST00000498007.1_1_6:31324459-31324935:-|nuORF 5.286761442820231 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7773 42.805 800.0 212030.0 25 0 27244.0 + 41817 VPWLKREL 8 136 520.816413395036 1039.6182738568718 2 520.8161498904228 MULTI CID FTMS 0 0 0 7770 123246.25 1.0 0 0.0 3 Unmodified _VPWLKREL_ ENSG00000197579|ENST00000360538|TOPORS;nc|ENSG00000197579|Q9NS56-2|TOPORS 21.59015148037692 0.5901128892327699 2 VPW{I|L}K{[RE]|[WV]}{I|L} 8 0 + 63.88 0.0 0.0 6.1446 6.1446 83.886 0.0 0.0 0.0 39.187522094009 3.8173657553704032 3.8173657553704032 6.262874945799766 0 1.1307196863200843 1.6989700043360187 0.0 0.0 + + VPW{I|L}K{[RE]|[WV]}{I|L};VP{I|L}WK{[RE]|[WV]}{I|L};VPW{I|L}K[{I|L}V]W;VP{[DA]|[EG]}{I|L}K{[RE]|[WV]}{I|L};VP{I|L}WK[{I|L}V]W;VP{[DA]|[EG]}{I|L}K[{I|L}V]W;{I|L}VPWK{[RE]|[WV]}{I|L};V{I|L}PWK{[RE]|[WV]}{I|L};V{I|L}PWK[{I|L}V]W;{I|L}VPWK[{I|L}V]W 6.1446;5.5422;5.5066;5.2537;4.9042;4.6157;3.2865;3.2098;2.5718;2.2823 +;-;-;-;-;-;-;-;-;- + 279 + 1 2.008 138264.9 0.5600000023841858 4266 3505 7770 DOHH2_400M_050219_2,7773 DOHH2_400M_050219_2,7773,VPWLKREL False True VPWLKREL 42.80468 520.816149890423 1138684.375 7770.0 ENSG00000197579|ENST00000360538|TOPORS;;nc|ENSG00000197579|Q9NS56-2|TOPORS 5.811074892679851 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7774 42.818 800.0 158370.0 25 0 18815.0 + 34133 SLLSKHLL 8 125 455.79012396299294 909.565694992786 2 455.7898437380791 MULTI CID FTMS 0 0 0 7770 117063.609375 1.0 0 0.0 4 Unmodified _SLLSKHLL_ ENSG00000093009|ENST00000263201|CDC45;nc|ENSG00000093009|O75419-2|CDC45;nc|ENSG00000093009|O75419-3|CDC45 34.10243960390752 0.3329570729325616 2 {I|L}S{I|L}SKH{I|L}{I|L} 8 2 + 69.582 0.0 0.0 7.65 7.65 97.177 0.0 0.0 0.0 43.583502063248446 6.446123420134256 6.446123420134256 51.12949333758088 0 0.6989700043360187 2.0 0.5 0.0 {I|L}S{I|L}SKH{I|L}{I|L};{I|L}{[WT]|[RM]}KH{I|L}{I|L} 7.65;2.0287 -;- 230 + 1 2.008 101750.2 0.5 4267 3505 7770 DOHH2_400M_050219_2,7774 DOHH2_400M_050219_2,7774,SLLSKHLL False True SLLSKHLL 42.818497 455.789843738079 732012.3125 7770.0 ENSG00000093009|ENST00000263201|CDC45;;nc|ENSG00000093009|O75419-2|CDC45;;nc|ENSG00000093009|O75419-3|CDC45 2.4079284270604453 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7775 42.832 800.0 129320.0 25 0 4486.4 -1 0 128 754.5367661859615 0 754.2631103396416 PEAK CID FTMS 0 0 0 7770 44764.98828125 1.0 0 0.0 5 2 P 1 -1 3.4949 0.0 0.0 0.2319 0.0 0.0 1281.91102824419 125.0726259820922 1406.9836542262822 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.2319 - 89 + 1 2.008 70236.7 0.800000011920929 4268 3505 7770 DOHH2_400M_050219_2,7775 DOHH2_400M_050219_2,7775, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7776 42.846 800.0 136530.0 25 0 14570.0 + + 20081 ILKQMQVL 8 146 486.7991282090232 971.5837034848464 2 486.7990295290947 MULTI CID FTMS 0 0 0 7770 99431.328125 1.0 0 0.0 6 Unmodified _LIWCLVLI_ ENSG00000115484|ENST00000394440|CCT4 41.81723621529253 0.2038889569391319 2 {I|L}{I|L} 2 -1 43.271 0.0 0.0 4.4537 0.0 0.0 0.0 742.3927096002561 742.3927096002561 16.38689707366744 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L} 4.4537 + + 316 + 1 2.008 86973.8 0.5 4269 3505 7770 DOHH2_400M_050219_2,7776 DOHH2_400M_050219_2,7776,LIWCLVLI False False ILKQMQVL 42.846161 486.799029529095 414614.78125 7770.0 ENSG00000115484|ENST00000394440|CCT4 3.754480600357056 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7777 42.86 800.0 178330.0 25 0 29312.0 + 35420 KEIIPTSEF 9 150 531.8167073282751 1061.6188617233502 2 531.8168212771416 MULTI CID FTMS 0 0 0 7770 97982.9140625 0.2560301490508819 -4 0.2195472717285156 7 Unmodified _STITKAWKK_ nc|ENSG00000153827|Q14669-2|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12 6.723162845929126 0.6799819581413107 2 {M(Oxidation (M))|F} 1 9 12.474 0.0 0.0 1.175 0.0 0.0 896.5393004213955 0.0 896.5393004213955 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.175 - 79 + 1 2.008 109725.7 0.5199999809265137 4270 3505 7770 DOHH2_400M_050219_2,7777 DOHH2_400M_050219_2,7777,STITKAWKK False False KEIIPTSEF 42.859993 531.816821277142 123497.328125 7770.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12 0.5753942281007767 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7778 42.875 800.0 154210.0 25 0 10672.0 + 5530 DMDRVLLKY 9 155 576.8074849211166 1151.6004169090331 2 576.8090087771416 MULTI CID FTMS 0 0 0 7770 94977.984375 0.0514449130853384 10 -0.9189300537109376 8 Unmodified _DMDRVLLKY_ chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;ENSG00000213999|ENST00000424583|MEF2B;nc|ENSG00000213999|Q02080|MEF2B 19.361941925380144 0.3125782356748823 2 V{I|L}{I|L}KY 5 4 37.457 0.0 0.0 3.2526 0.0 0.0 517.1951771466812 0.0 517.1951771466812 0.0 12.345872408998453 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + V{I|L}{I|L}KY 3.2526 + + 651 1 2.008 97401.0 0.5199999809265137 4271 3505 7770 DOHH2_400M_050219_2,7778 DOHH2_400M_050219_2,7778,DMDRVLLKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7780 42.887 482.0 330300.0 25 0 27653.0 -1 0 119 1031.4503151712272 3091.329116113882 3 1031.786181628704 MULTI CID FTMS 0 0 0 7779 324645.90625 0.3546011969647983 3 -0.3441162109375 1 2 [QT]PGYQATYAS 11 -1 40.359 0.0 0.0 1.3055 0.0 0.0 0.0 1920.7936639687289 1920.7936639687289 12.40894786250637 0.0 0.0 0.0 0 0.0 0.0 1.3684151806525389 1.2095083459089813 [QT]PGYQATYAS 1.3055 - 64588 1 1.992 104712.1 1.0 4272 3506 7779 DOHH2_400M_050219_2,7780 DOHH2_400M_050219_2,7780, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7781 42.89 123.0 533970.0 25 0 71387.0 + 36749 TDVYVNNEW 9 97 570.253147077898 1138.491741222596 2 570.2539550662041 MULTI CID FTMS 0 0 0 7779 462456.59375 0.5072288958407097 -1 0.0963058471679687 2 Unmodified _TDVYVNNEW_ ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A 21.74664581756881 0.2544899275067181 2 [YV]DTV 5 7 23.901 0.0 0.0 2.0993 0.0 0.0 0.0 558.1934373498021 558.1934373498021 5.964263880637564 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [YV]DTV 2.0993 - 212 1 1.992 55504.9 1.0 4273 3506 7779 DOHH2_400M_050219_2,7781 DOHH2_400M_050219_2,7781,TDVYVNNEW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7782 42.893 167.0 579060.0 25 0 57331.0 + 26420 NTDPWAGYRY 10 117 621.7805841754958 1241.5466154177916 2 621.7809936404228 MULTI CID FTMS 0 0 0 7779 438269.125 0.5248223319670735 3 -0.3441162109375 3 Unmodified _NTDPWAGYRY_ ENSG00000164024|ENST00000296411|METAP1;ENST00000510209.5_1_4:99916904-99957225:+|nuORF;ENST00000513199.5_1_4:99943548-99960531:+|nuORF 63.960520009940105 0.0261970246776379 2 {[QS]|[NT]}DPWAGY[YR] 10 0 + 70.367 0.0 0.0 5.6677 5.6677 82.666 0.0 0.0 0.0 47.06608156627958 6.888793896675267 6.888793896675267 6.53212513775344 0 0.8494850021680094 1.6989700043360187 0.0 0.4247425010840047 + + {[QS]|[NT]}DPWAGY[YR];{[QS]|[NT]}DPWQY[YR];{[QS]|[NT]}DPWAG[TP]{[{M(Oxidation (M))|F}H]|[RQ]};{[QS]|[NT]}DPWQ[TP]{[{M(Oxidation (M))|F}H]|[RQ]};{[QS]|[NT]}DPW[HM][WR];{[QS]|[NT]}{[{M(Oxidation (M))|F}C]|[YS]}[Y{I|L}]Y[YR] 5.6677;5.1415;4.8289;4.2992;3.6951;1.1436 +;-;-;-;-;- + 584 + 1 1.992 75343.3 1.0 4274 3506 7779 DOHH2_400M_050219_2,7782 DOHH2_400M_050219_2,7782,NTDPWAGYRY True True NTDPWAGYRY 42.893186 621.780993640423 13200922.0 7779.0 ENSG00000164024|ENST00000296411|METAP1;;ENST00000510209.5_1_4:99916904-99957225:+|nuORF;;ENST00000513199.5_1_4:99943548-99960531:+|nuORF 8.904078801472982 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7783 42.896 155.0 406870.0 25 0 85057.0 + 24335 MEKKLWRV 8 74 545.3165366524856 1088.6185203717712 2 545.3168212771416 MULTI CID FTMS 0 0 0 7779 381811.375 0.9395144822762432 1 -0.1439170837402343 4 Unmodified _MEKKLWRV_ REV__ENSG00000106397|ENST00000223127|PLOD3;REV__ENST00000478082.5_1_7:100856177-100861250:-|nuORF 4.75600775471527 0.7954636275367004 2 Y 1 -1 11.42 0.0 0.0 1.049 0.0 0.0 907.5438266235276 0.0 907.5438266235276 0.0 11.419983281826005 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.049 - 3 + 1 1.992 52570.4 1.0 4275 3506 7779 DOHH2_400M_050219_2,7783 DOHH2_400M_050219_2,7783,MEKKLWRV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7784 42.901 231.0 437010.0 25 0 76370.0 + 18551 LAAAVNRH 8 105 426.2462620077636 850.4779710823271 2 426.2464172244072 MULTI CID FTMS 0 0 0 7779 305413.34375 0.6863991478819041 -1 0.0963058471679687 5 Unmodified _LAAAVNRH_ REV__ENST00000436411.5_1_7:107204485-107204728:+|nuORF;REV__ENST00000443233.5_1_7:107204485-107205092:+|nuORF 2.577480529830294 0.808687252328423 2 H 1 -1 9.2694 0.0 0.0 1.0899 0.0 0.0 695.4108151758803 0.0 695.4108151758803 0.0 3.784809756568528 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.0899 + + 7 + 1 1.992 86847.4 1.0 4276 3506 7779 DOHH2_400M_050219_2,7784 DOHH2_400M_050219_2,7784,LAAAVNRH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7785 42.907 354.0 361350.0 25 0 59476.0 + 26375 NSYWVGEDSTY 11 133 660.7726891365044 1319.5308253398086 2 660.7713500857353 MULTI CID FTMS 0 0 0 7779 261885.5 0.3493029518083789 3 -0.3441162109375 6 Unmodified _NSYWVGEDSTY_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 40.23920728925047 0.2087110615831976 2 [NS]YWV 5 6 44.341 0.0 0.0 3.3603 0.0 0.0 0.0 667.2220359195767 667.2220359195767 22.134475811582632 0.0 0.0 0.0 0 0.5 1.154901959985743 0.6307196863200843 0.8296896906561032 + [NS]YWV 3.3603 + + 407 1 1.992 93756.8 1.0 4277 3506 7779 DOHH2_400M_050219_2,7785 DOHH2_400M_050219_2,7785,NSYWVGEDSTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7786 42.91 139.0 383310.0 25 0 70432.0 + 23652 LTRGQEKGL 9 91 501.290428884807 1000.566304836414 2 501.2905456423759 MULTI CID FTMS 0 0 0 7779 269560.4375 0.2622027816322901 13 -0.9746932983398438 7 Unmodified _LTRGQEKGL_ REV__ENST00000262031.9_2_12:56983630-56983771:+|nuORF 4.75600775471527 0.7486543447549536 2 {I|L} 1 -1 9.6777 0.0 0.0 0.96722 0.0 0.0 869.4713321575063 0.0 869.4713321575063 0.0 8.083916240743346 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.96722 + + 18 + 1 1.992 48033.2 1.0 4278 3506 7779 DOHH2_400M_050219_2,7786 DOHH2_400M_050219_2,7786,LTRGQEKGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7787 42.916 326.0 229690.0 25 0 18023.0 + 11261 GESSVGTNMGW 11 116 562.7370085191922 1123.4594641051842 2 562.7373535037041 MULTI CID FTMS 0 0 0 7779 219856.8125 1.0 0 0.0 8 Unmodified _GESSVGTNMGW_ ENSG00000067533|ENST00000366932|RRP15;ENST00000491428.1_1_1:218458703-218475928:+|nuORF 30.63653989081413 0.3728473165938781 2 MGW 3 8 23.188 0.0 0.0 2.0639 0.0 0.0 731.3071336381905 0.0 731.3071336381905 0.0 -3.5822685886482475 -3.5822685886482475 0.0 0 0.0 0.0 0.0 0.0 + MGW 2.0639 + + 204 + 1 1.992 61758.9 1.0 4279 3506 7779 DOHH2_400M_050219_2,7787 DOHH2_400M_050219_2,7787,GESSVGTNMGW False True GESSVGTNMGW 42.915732 562.737353503704 1594369.125 7779.0 ENST00000491428.1_1_1:218458703-218475928:+|nuORF;;ENSG00000067533|ENST00000366932|RRP15 4.72966194152832 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7788 42.921 313.0 282050.0 25 0 45980.0 31658 RRGQVGPV 8 105 434.7594645779096 867.5043762226192 2 434.7591735720634 MULTI CID FTMS 0 0 0 7779 195176.0 0.9269309490738232 -1 0.0963058471679687 9 Unmodified _RRGQVGPV_ ENST00000462875.1_1_6:31609004-31609235:-|nuORF 0.7936320650641473 0.8195151834710337 2 {I|L} 1 8 9.3323 0.0 0.0 1.0758 0.0 0.0 736.4090373327739 0.0 736.4090373327739 0.0 9.33230545814891 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0758 - 3 + 1 1.992 71871.9 1.0 4280 3506 7779 DOHH2_400M_050219_2,7788 DOHH2_400M_050219_2,7788,RRGQVGPV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7789 42.929 446.0 289880.0 25 0 39785.0 + 6194 DTEKELQALY 10 140 605.3045003920868 1208.5944478509734 2 605.3049194216728 MULTI CID FTMS 0 0 0 7779 184393.515625 1.0 0 0.0 10 Unmodified _DTEKELQALY_ ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3;nc|ENSG00000075151|O43432|EIF4G3 62.57269311338072 0.0298375429882549 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AGAYDKKY 10 9 + 49.681 0.0 0.0 4.1107 4.1107 76.507 0.0 0.0 0.0 7.151282078846599 7.151282078846599 7.151282078846599 6.532125137753432 0 0.5 0.0 0.6203715150305281 0.805462187404089 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AGAYDKKY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQYDKKY;[{I|L}A]{[DA]|[EG]}K{[C(Carbamidomethyl (C))G]|[NC]}AGA{I|L}Y;[NP]V{I|L}EYAGA{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AG{I|L}{[ES]|[DT]|[{I|L}C]}Y{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QAYDKKY;[{I|L}A]{[DA]|[EG]}KA{[C(Carbamidomethyl (C))G]|[NC]}GA{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{I|L}{[ES]|[DT]|[{I|L}C]}Y{I|L}Y;[AG]{[QN]|[E{I|L}]|[KN]}K{[C(Carbamidomethyl (C))G]|[NC]}AGA{I|L}Y;[{I|L}A]{[DA]|[EG]}K{[C(Carbamidomethyl (C))G]|[NC]}QA{I|L}Y 4.1107;3.5702;3.519;3.3766;3.2824;3.2552;3.1648;3.0934;3.0208;2.9719 -;-;-;-;-;-;-;-;-;- 801 + 1 1.992 93574.1 1.0 4281 3506 7779 DOHH2_400M_050219_2,7789 DOHH2_400M_050219_2,7789,DTEKELQALY True True DTEKELQALY 42.929355 605.304919421673 1139754.375 7779.0 nc|ENSG00000075151|O43432|EIF4G3;;nc|ENSG00000075151|O43432-3|EIF4G3;;ENSG00000075151|ENST00000602326|EIF4G3;;nc|ENSG00000075151|O43432-4|EIF4G3 6.790042877197266 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7790 42.939 547.0 295720.0 25 0 32233.0 + 10440 FTEEQAVLY 9 157 550.2689371712797 1098.5233214093594 2 550.2689086794853 MULTI CID FTMS 0 0 0 7779 136015.859375 0.342281485202613 -1 0.0963058471679687 11 Unmodified _FTEEQAVLY_ ENSG00000167881|ENST00000307877|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68 68.08070601005525 0.0218408846571049 2 EEQT{M(Oxidation (M))|F}AV{I|L}Y 9 4 + 64.573 0.0 0.0 5.8782 5.8782 78.001 0.0 0.0 0.0 14.26046029469326 8.697114610913488 8.697114610913488 1.9453781259591096 0 0.8935078169319297 1.5228787452803376 1.873712505420024 0.0 EEQT{M(Oxidation (M))|F}AV{I|L}Y;EEQTA{M(Oxidation (M))|F}V{I|L}Y;EETQ{M(Oxidation (M))|F}AV{I|L}Y;EEQAT{M(Oxidation (M))|F}V{I|L}Y;EETQA{M(Oxidation (M))|F}V{I|L}Y;EE[AG]T{M(Oxidation (M))|F}AV{I|L}Y;EET{M(Oxidation (M))|F}QAV{I|L}Y;EE[AG]TA{M(Oxidation (M))|F}V{I|L}Y;EET{M(Oxidation (M))|F}AGAV{I|L}Y;EEQTAV{M(Oxidation (M))|F}{I|L}Y 5.8782;5.7011;5.5798;5.5397;5.4027;5.04;5.0317;4.8629;4.857;4.7924 -;-;-;-;-;-;-;-;-;- 2644 1 1.992 126327.9 1.0 4282 3506 7779 DOHH2_400M_050219_2,7790 DOHH2_400M_050219_2,7790,FTEEQAVLY True True FTEEQAVLY 42.938975 550.268908679485 2833323.25 7779.0 nc|ENSG00000167881|Q9UHB9-4|SRP68;;ENSG00000167881|ENST00000307877|SRP68;;nc|ENSG00000167881|Q9UHB9-2|SRP68 7.489218711853027 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7791 42.954 800.0 112040.0 25 0 9928.5 + -1 FLFCVMDCCL 10 128 625.7569683191533 1249.4993837051063 2 625.7562133669853 MULTI CID FTMS 0 0 0 7779 87473.03125 1.0 0 0.0 12 Carbamidomethyl (C) _FLFC(Carbamidomethyl (C))VMDCCL_ REV__ENSG00000099785|ENST00000215555|MARCHF2 4.3292370932331545 0.7066112369704343 2 Y 1 -1 16.99 0.0 0.0 1.3597 0.0 0.0 1068.4248272859645 0.0 1068.4248272859645 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3597 - 79 + 1 1.992 72169.5 0.5699999928474426 4283 3506 7779 DOHH2_400M_050219_2,7791 DOHH2_400M_050219_2,7791,FLFCVMDCCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7792 42.966 703.0 217850.0 25 0 16571.0 -1 0 135 697.3589046093633 696.3516281427633 1 697.3593627810478 MULTI CID FTMS 0 0 0 7779 336640.96875 0.2536055384520927 4 -0.407562255859375 13 2 [{I|L}A]SM{I|L}Y 6 -1 + 66.05 0.0 0.0 9.4851 9.4851 89.02 0.0 0.0 0.0 8.165800984889515 5.713089321201871 5.713089321201871 5.713089321201871 0 1.2491348669726234 0.8860566476931632 1.2302046884880935 0.0 [{I|L}A]SM{I|L}Y;[{I|L}A]SMY{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}A{I|L}Y;{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SA{I|L}Y;{[TV]|[{I|L}S]}AM{I|L}Y;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}AY{I|L};[{I|L}A]S{I|L}MY;{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}Y{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SAY{I|L} 9.4851;8.6647;8.3125;7.9269;7.6273;7.551;7.492;7.2678;7.1065;6.8069 -;-;-;-;-;-;-;-;-;- 354 1 1.992 108333.3 1.0 4284 3506 7779 DOHH2_400M_050219_2,7792 DOHH2_400M_050219_2,7792, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7793 42.98 800.0 102760.0 25 0 2765.9 -1 0 128 917.43033464959 1832.84611636598 2 917.4296752810478 MULTI CID FTMS 0 0 0 7779 118444.078125 1.0 0 0.0 14 2 [MN]PN{I|L}NA[WY]ESV{I|L}T 14 -1 65.536 0.0 0.0 3.5757 0.0 0.0 0.0 197.0570314996704 197.0570314996704 47.38351285388511 0.0 0.0 0.0 0 0.4731975075880329 1.3979400086720375 1.6861818737241734 0.4247425010840047 [MN]PN{I|L}NA[WY]ESV{I|L}T 3.5757 - 8999 + 1 1.992 56830.3 0.6399999856948853 4285 3506 7779 DOHH2_400M_050219_2,7793 DOHH2_400M_050219_2,7793, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7794 42.987 313.0 177090.0 25 0 2879.6 -1 0 67 733.0286763245767 0 732.9950439333916 PEAK CID FTMS 0 0 0 7779 14908.177734375 0.2946758814580184 -1 0.0963058471679687 15 2 Y 1 -1 2.7642 0.0 0.0 0.18881 0.0 0.0 1102.886440928647 195.0781649225219 1297.964605851169 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.18881 - 2 + 1 1.992 43349.1 1.0 4286 3506 7779 DOHH2_400M_050219_2,7794 DOHH2_400M_050219_2,7794, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7795 42.991 230.0 303970.0 25 0 16441.0 + 4818 DEVDRISEW 9 109 574.7643474146236 1147.514141896047 2 575.2665283083916 MULTI CID FTMS 0 0 0 7779 98537.1875 1.0 0 0.0 16 Unmodified _DEVDRISEW_ ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2 19.361941925380144 0.3125782356748823 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VD{[QS]|[NT]}{[QS]|[NT]}SS 10 5 25.037 0.0 0.0 2.1818 0.0 0.0 0.0 82.06701837711171 82.06701837711171 6.989119338223908 0.0 0.0 0.0 0 0.4247425010840047 0.8860566476931632 0.3054621874040891 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VD{[QS]|[NT]}{[QS]|[NT]}SS 2.1818 - 186 + 1 1.992 56413.1 1.0 4287 3506 7779 DOHH2_400M_050219_2,7795 DOHH2_400M_050219_2,7795,DEVDRISEW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7796 43.005 800.0 74802.0 25 0 4809.3 + -1 EPIRFRCCCC 10 106 700.7861745049861 0 700.4092895388603 PEAK CID FTMS 0 0 0 -1 0 17 3 Carbamidomethyl (C) _EPIRFRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C_ REV__ENSG00000173818|ENST00000518137|ENDOV;REV__ENST00000521330.6_1_17:78388994-78402256:+|nuORF;REV__nc|ENSG00000173818|Q8N8Q3-2|ENDOV;REV__nc|ENSG00000173818|Q8N8Q3-3|ENDOV;REV__nc|ENSG00000173818|Q8N8Q3-4|ENDOV;REV__nc|ENSG00000173818|Q8N8Q3-5|ENDOV;REV__nc|ENSG00000173818|Q8N8Q3-6|ENDOV;REV__nc|ENSG00000173818|Q8N8Q3-7|ENDOV 1.6526216038709556 0.3961065659209837 2 P 1 -1 5.4846 0.0 0.0 0.39188 0.0 0.0 1183.430535800208 116.05122553043202 1299.48176133064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.39188 + + 37 + 1 1.992 50165.6 0.6399999856948853 4288 3506 7779 DOHH2_400M_050219_2,7796 DOHH2_400M_050219_2,7796,EPIRFRCCCC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7797 43.019 800.0 79646.0 25 0 5132.7 -1 0 73 987.1318776086324 2958.3738034260973 3 987.8027221560478 MULTI CID FTMS 0 0 0 7779 85041.5078125 1.0 0 0.0 18 2 [NP]{I|L}NW 5 -1 12.932 0.0 0.0 0.43713 0.0 0.0 0.0 2331.061705607991 2331.061705607991 -1.288624837399297 0.0 -1.288624837399297 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}NW 0.43713 - 187 1 1.992 53110.1 0.6100000143051147 4289 3506 7779 DOHH2_400M_050219_2,7797 DOHH2_400M_050219_2,7797, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7799 43.024 32.0 2375700.0 25 0 359350.0 + 33829 SLDVGGPLRY 10 67 538.7904762877445 1075.5663996422888 2 538.7906371951103 MULTI CID FTMS 0 0 0 7798 1630941.625 0.7478150501446049 1 -0.123748779296875 1 Unmodified _SLDVGGPLRY_ ENSG00000176894|ENST00000317479|PXMP2 31.26834338654808 0.266153677697784 2 {[TV]|[{I|L}S]}DVGG{I|L}PRY 10 2 + 61.955 0.0 0.0 5.7602 5.7602 83.144 0.0 0.0 0.0 49.73660722610156 4.291294632377571 4.291294632377571 6.53212513775344 0 1.1989700043360187 2.0 0.0 0.0 {[TV]|[{I|L}S]}DVGG{I|L}PRY;{[TV]|[{I|L}S]}DVN{I|L}PRY;{[TV]|[{I|L}S]}DV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[TV]|[{I|L}S]}[PA];{[TV]|[{I|L}S]}DV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG][{I|L}T] 5.7602;5.1529;3.8502;3.5704 -;-;-;- 146 + 1 1.992 61147.9 1.0 4290 3507 7798 DOHH2_400M_050219_2,7799 DOHH2_400M_050219_2,7799,SLDVGGPLRY False True SLDVGGPLRY 43.023756 538.79063719511 49185591.0 7798.0 ENSG00000176894|ENST00000317479|PXMP2 7.311089515686035 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7800 43.025 67.0 1242200.0 25 0 127850.0 + 7917 AEGPHINFY 9 118 523.8220822015685 1045.629611469937 2 523.8218261599541 MULTI CID FTMS 0 0 0 7798 181309.734375 0.3312597689436432 1 -0.123748779296875 2 Unmodified _ELQKRFIL_ ENST00000572176.1_1_17:3838413-3839645:-|nuORF;nc|ENSG00000074370|Q93084-3|ATP2A3;ENSG00000074370|ENST00000397041|ATP2A3;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3 23.1484247019978 0.5573009939494978 2 E{I|L}QK 4 4 43.761 0.0 0.0 4.1851 0.0 0.0 0.0 544.3272799127561 544.3272799127561 8.634993639681312 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.0 0.0 + E{I|L}QK 4.1851 + + 467 + 1 1.992 67581.4 1.0 4291 3507 7798 DOHH2_400M_050219_2,7800 DOHH2_400M_050219_2,7800,ELQKRFIL False True AEGPHINFY 43.025366 523.821826159954 4625524.5 7798.0 ENST00000572176.1_1_17:3838413-3839645:-|nuORF;;nc|ENSG00000074370|Q93084-3|ATP2A3;;ENSG00000074370|ENST00000397041|ATP2A3;;nc|ENSG00000074370|Q93084-1|ATP2A3;;nc|ENSG00000074370|Q93084-4|ATP2A3;;nc|ENSG00000074370|Q93084-6|ATP2A3;;nc|ENSG00000074370|Q93084-5|ATP2A3;;nc|ENSG00000074370|Q93084-7|ATP2A3 5.52861754099528 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7801 43.027 49.0 1370400.0 25 0 183330.0 23541 LTLLIFYY 8 108 523.3030520939583 1044.5915512547165 2 523.3041259646416 MULTI CID FTMS 0 0 0 7798 834266.4375 0.8625725091383194 -2 0.2402229309082031 3 Unmodified _LTLLIFYY_ ENSG00000186815|ENST00000335509|TPCN1;ENST00000551127.5_1_12:113726380-113729792:+|nuORF;ENST00000552077.5_1_12:113726380-113733878:+|nuORF;nc|ENSG00000186815|Q9ULQ1-3|TPCN1 5.760428011301431 0.7893668129297577 2 {M(Oxidation (M))|F}N{I|L}Y{M(Oxidation (M))|F}Y 6 5 24.078 0.0 0.0 2.305 0.0 0.0 179.18793904944147 0.0 179.18793904944147 0.0 14.245331591126842 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}N{I|L}Y{M(Oxidation (M))|F}Y 2.305 - 188 + 1 1.992 55041.5 1.0 4292 3507 7798 DOHH2_400M_050219_2,7801 DOHH2_400M_050219_2,7801,LTLLIFYY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7802 43.029 82.0 678490.0 25 0 51206.0 + 29657 QNMIKGVTL 9 95 502.2831465707071 1002.551740208214 2 502.2833740115166 MULTI CID FTMS 0 0 0 7798 428937.375 0.5142027285494309 -1 0.1439170837402343 4 Unmodified _QNMIKGVTL_ ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000514842.5_1_4:39459094-39460113:-|nuORF;ENST00000561773.1_1_15:66671752-66672088:-|nuORF 34.40172386719151 0.1061884637610825 2 {[QN]|[E{I|L}]|[KN]}M{I|L}[RK]T 7 3 30.453 0.0 0.0 3.0376 0.0 0.0 0.0 128.07212244205314 128.07212244205314 4.27755885601902 0.0 0.0 0.0 0 0.6307196863200843 1.154901959985743 0.2887254899964357 0.0 {[QN]|[E{I|L}]|[KN]}M{I|L}[RK]T 3.0376 - 151 + 1 1.992 48451.0 1.0 4293 3507 7798 DOHH2_400M_050219_2,7802 DOHH2_400M_050219_2,7802,QNMIKGVTL True True QNMIKGVTL 43.028527 502.283374011517 5134934.5 7798.0 ENSG00000163682|ENST00000295955|RPL9;;ENST00000514842.5_1_4:39459094-39460113:-|nuORF;;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;;ENST00000561773.1_1_15:66671752-66672088:-|nuORF;;ENST00000439124.1_1_6:64325734-64326112:-|nuORF 7.004699389139812 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7803 43.032 205.0 184760.0 25 0 15976.0 + -1 RFIVRPMP 8 73 516.295909720368 1030.5772665075358 2 516.2961913943291 MULTI CID FTMS 0 0 0 7798 327977.71875 1.0 0 0.0 5 Oxidation (M) _RFIVRPM(Oxidation (M))P_ REV__ENSG00000136937|ENST00000375147|NCBP1 2.302733041254933 0.8103549651115762 2 Y 1 -1 11.783 0.0 0.0 1.1433 0.0 0.0 849.5026795708155 0.0 849.5026795708155 0.0 10.67349286948728 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1433 - 6 + 1 1.992 38585.8 1.0 4294 3507 7798 DOHH2_400M_050219_2,7803 DOHH2_400M_050219_2,7803,RFIVRPMP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7804 43.035 143.0 387830.0 25 0 21670.0 -1 RCHRRRRRCCC 11 60 866.9070133939276 1731.7994738546552 2 867.4017822146416 MULTI CID FTMS 0 0 0 7798 314997.40625 0.0401551053111364 17 -0.967376708984375 6 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 2 QDAD{I|L}NP[EP] 9 -1 49.346 0.0 0.0 2.8494 0.0 0.0 734.3726063459 0.0 734.3726063459 0.0 3.557551698048549 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 QDAD{I|L}NP[EP] 2.8494 - 532 1 1.992 46410.8 1.0 4295 3507 7798 DOHH2_400M_050219_2,7804 DOHH2_400M_050219_2,7804,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7805 43.038 130.0 438100.0 25 0 27570.0 + 7083 EELPHIHAF 9 83 546.7778567760204 0 546.7772094607353 PEAK CID FTMS 0 0 0 7798 273750.90625 0.8977764937475609 1 -0.123748779296875 7 Unmodified _EELPHIHAF_ ENSG00000169627|ENST00000651894|BOLA2B;ENSG00000183336|ENST00000330978|BOLA2;ENST00000567436.1_1_16:30204298-30204508:-|nuORF 37.97399986684836 0.0716774499419844 2 {I|L}PH{I|L}H 5 4 24.068 0.0 0.0 2.205 0.0 0.0 258.08552717142487 233.0936525934204 491.1791797648452 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}PH{I|L}H 2.205 + + 198 + 1 1.992 46989.3 1.0 4296 3507 7798 DOHH2_400M_050219_2,7805 DOHH2_400M_050219_2,7805,EELPHIHAF True True EELPHIHAF 43.038008 546.7792 4768024.0 7798.0 ENSG00000183336|ENST00000330978|BOLA2;;ENST00000567436.1_1_16:30204298-30204508:-|nuORF;;ENSG00000169627|ENST00000651894|BOLA2B 9.57789659500122 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7806 43.042 210.0 397730.0 25 0 51865.0 -1 0 124 377.2171344241988 376.2098579575988 1 377.2168151736259 MULTI CID FTMS 0 0 0 7798 233348.328125 0.2412448136774952 14 -0.8643989562988281 8 2 W 1 -1 11.259 0.0 0.0 2.9928 0.0 0.0 172.11923403357378 0.0 172.11923403357378 0.0 5.743030899546675 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.9928 - 10 + 1 1.992 71615.4 1.0 4297 3507 7798 DOHH2_400M_050219_2,7806 DOHH2_400M_050219_2,7806, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7807 43.048 340.0 255650.0 25 0 50186.0 + 26332 NSDNNTIFV 9 105 512.2401077358561 1022.4656625385122 2 512.2414428591728 MULTI CID FTMS 0 0 0 7798 221819.96875 1.0 0 0.0 9 Unmodified _NSDNNTIFV_ ENSG00000089280|ENST00000254108|FUS;ENSG00000270647|ENST00000605844|TAF15;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;nc|ENSG00000089280|P35637-2|FUS;nc|ENSG00000270647|Q92804-2|TAF15 39.94969957227396 0.0757326808254658 2 [NS]QDSN 6 6 37.411 0.0 0.0 3.6589 0.0 0.0 0.0 374.2065579494369 374.2065579494369 12.03678910848688 0.0 0.0 0.0 0 0.0 0.7695510786217261 2.004432191740108 0.3807196863200844 [NS]QDSN 3.6589 - 356 1 1.992 72696.6 1.0 4298 3507 7798 DOHH2_400M_050219_2,7807 DOHH2_400M_050219_2,7807,NSDNNTIFV True True NSDNNTIFV 43.048158 512.241442859173 1342432.625 7798.0 ENSG00000089280|ENST00000254108|FUS;;ENSG00000270647|ENST00000605844|TAF15;;nc|ENSG00000270647|Q92804-2|TAF15;;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 5.7847927411397295 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7808 43.052 190.0 306310.0 25 0 42450.0 + 7378 EGFLKAQAL 9 102 488.7765253973224 975.5384978614449 2 488.7772704958916 MULTI CID FTMS 0 0 0 7798 158123.109375 1.0 0 0.0 10 Unmodified _EGFLKAQAL_ ENSG00000136758|ENST00000376016|YME1L1;ENST00000463270.1_1_10:27418274-27425210:-|nuORF;nc|ENSG00000136758|Q96TA2-3|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1 26.88365393820708 0.1891292719743517 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}V{[CT]|[{M(Oxidation (M))|F}G]}A{I|L} 9 5 + 30.556 0.0 0.0 3.1323 3.1323 75.013 0.0 0.0 0.0 -3.6171945858502106 0.8910774833115234 -3.6171945858502106 8.23908740944319 0 0.0 0.0 1.1505149978319906 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}V{[CT]|[{M(Oxidation (M))|F}G]}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}VT{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}K[MD]{I|L};[KA]Q[YK]{I|L}[EP];[KA]Q{I|L}[YK][EP];[QA]K[YK]{I|L}[EP];[KA][AG][YK]{I|L}[EP];[QA]K{I|L}[YK][EP];[KA][AG]{I|L}[YK][EP] 3.1323;2.2877;2.2629;2.0823;1.789;1.1718;0.97879;0.83956;0.36163;0.2224 -;-;-;-;-;-;-;-;-;- 663 + 1 1.992 48909.2 1.0 4299 3507 7798 DOHH2_400M_050219_2,7808 DOHH2_400M_050219_2,7808,EGFLKAQAL False True EGFLKAQAL 43.051802 488.777270495892 2030669.5 7798.0 nc|ENSG00000136758|Q96TA2|YME1L1;;ENST00000463270.1_1_10:27418274-27425210:-|nuORF;;ENSG00000136758|ENST00000376016|YME1L1;;nc|ENSG00000136758|Q96TA2-3|YME1L1 0.7347275416056315 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7809 43.064 719.0 308910.0 25 0 37779.0 + 8718 EVLKPKLL 8 148 470.3152380682801 938.6159232033602 2 470.3149902224541 MULTI CID FTMS 0 0 0 7798 152185.796875 0.3897072209715085 -2 0.2402229309082031 11 Unmodified _EVLKPKLL_ ENSG00000117151|ENST00000370630|CTBS 49.93300154707207 0.1395624531867191 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}KPK{I|L}{I|L} 8 0 + 53.81 0.0 0.0 5.7329 5.7329 88.712 0.0 0.0 0.0 13.26606256887672 14.904630595263413 13.26606256887672 13.26606256887672 0 1.5924778212679485 2.0 0.2302046884880938 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}{I|L}KPK{I|L}{I|L};[{I|L}P]KK{I|L}D{I|L}{I|L};[KP]K{I|L}{I|L}D{I|L}{I|L};KKP{I|L}{I|L}D{I|L}{I|L};[{I|L}P]KK{I|L}{I|L}D{I|L};[KP]K{I|L}{I|L}{I|L}D{I|L};[KP]{I|L}K{I|L}D{I|L}{I|L};KKP{I|L}{I|L}{I|L}D{I|L};{I|L}{I|L}DKPK{I|L}{I|L};KK{I|L}P{I|L}D{I|L}{I|L} 5.7329;4.3196;4.2708;4.1377;3.8398;3.791;3.7625;3.6579;3.409;3.3087 +;-;-;-;-;-;-;-;-;- + 363 1 1.992 169249.0 1.0 4300 3507 7798 DOHH2_400M_050219_2,7809 DOHH2_400M_050219_2,7809,EVLKPKLL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7810 43.073 490.0 244130.0 25 0 24431.0 + 35668 SVDPHGFISY 10 130 561.2666909069633 1120.5188288807265 2 561.2671996951103 MULTI CID FTMS 0 0 0 7798 145855.421875 0.0093264358772381 13 -0.8605079650878906 12 Unmodified _SVDPHGFISY_ ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;nc|ENSG00000105197|Q3ZCQ8-3|TIMM50 96.11092074494114 0.0088956849251946 2 [VS]D[HM]{I|L}G{I|L}SY 10 3 + 74.869 0.0 0.0 6.6816 6.6816 79.856 0.0 0.0 0.0 34.24742501084005 11.505149978319906 11.505149978319906 1.3329467548003748 0 1.9419628234359576 2.0 1.055462187404089 0.0 [VS]D[HM]{I|L}G{I|L}SY;[VS]DPH{M(Oxidation (M))|F}G{I|L}SY;WDP[NG]{I|L}G{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}{I|L}SDVSY;[VS][HM]D{I|L}G{I|L}SY;{[CT]|[{M(Oxidation (M))|F}G]}HP{I|L}SDVSY;[VS]DP[NG]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;[VS][WY]G{M(Oxidation (M))|F}{I|L}SY;[HM]VDS{I|L}G{I|L}SY;{[CT]|[{M(Oxidation (M))|F}G]}H{I|L}PSDVSY 6.6816;6.5627;6.0328;5.9759;5.5421;5.5409;5.3708;5.34;5.1934;5.1902 -;-;-;-;-;-;-;-;-;- 3568 + 1 1.992 93872.5 1.0 4301 3507 7798 DOHH2_400M_050219_2,7810 DOHH2_400M_050219_2,7810,SVDPHGFISY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7811 43.08 393.0 161470.0 25 0 20546.0 15388 IPPAFRRIH 9 106 553.8307324203479 1105.6469119074957 2 553.8300659060478 MULTI CID FTMS 0 0 0 7798 135492.484375 0.4721908693520454 2 -0.2001991271972656 13 Unmodified _IPPAFRRIH_ ENST00000343060.4_1_7:27133701-27134016:-|nuORF 8.593279151180031 0.6146971463335029 2 PY 2 8 13.711 0.0 0.0 1.2401 0.0 0.0 114.08137343268945 728.4236536996622 842.5050271323516 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PY 1.2401 - 38 + 1 1.992 55721.9 1.0 4302 3507 7798 DOHH2_400M_050219_2,7811 DOHH2_400M_050219_2,7811,IPPAFRRIH False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7812 43.088 448.0 205430.0 25 0 21388.0 + 1799 ALSPVPSHW 9 100 497.26100580424645 992.5074586752928 2 497.2611266970634 MULTI CID FTMS 0 0 0 7798 134127.421875 1.0 0 0.0 14 Unmodified _ALSPVPSHW_ ENSG00000007312|ENST00000006750|CD79B;ENST00000558969.1_1_17:62008689-62009627:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B;nc|ENSG00000007312|P40259-3|CD79B 57.47134341890925 0.0274820932774257 2 [{I|L}A]SPVPSHW 9 0 + 84.83 0.0 0.0 8.547 8.547 89.237 0.0 0.0 0.0 27.147642715192504 6.368220975871751 6.368220975871751 6.368220975871751 0 0.9247425010840048 2.0 0.75 0.0 + + [{I|L}A]SPVPSHW;[{I|L}A]SPVPSWH;[{I|L}A]SPVW[PS]H;[{I|L}A]SPVP[C(Carbamidomethyl (C))H]{I|L};[{I|L}A]S[RH]SHW;[{I|L}A]S[RH]SWH;[{I|L}A]SPK[YE]W;[{I|L}A]SP[R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}];[{I|L}A]SPQ[PS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}A]SP[R{M(Oxidation (M))|F}][CS]{I|L} 8.547;7.9054;6.5244;6.3064;5.9807;5.339;5.0708;4.8755;4.6009;4.5919 +;-;-;-;-;-;-;-;-;- + 553 + 1 1.992 75330.4 1.0 4303 3507 7798 DOHH2_400M_050219_2,7812 DOHH2_400M_050219_2,7812,ALSPVPSHW True True ALSPVPSHW 43.087943 497.261126697063 993642.9375 7798.0 nc|ENSG00000007312|P40259-3|CD79B;;ENSG00000007312|ENST00000006750|CD79B;;nc|ENSG00000007312|P40259-2|CD79B;;ENST00000558969.1_1_17:62008689-62009627:-|nuORF 6.66342814763387 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7813 43.103 800.0 151550.0 25 0 4929.2 -1 0 118 908.4262014463012 1814.8378499594023 2 908.928271472454 MULTI CID FTMS 0 0 0 7798 134431.671875 1.0 0 0.0 15 2 [MN]PN{I|L}NEAQ[HV]EN{I|L} 14 -1 87.776 0.0 0.0 4.8366 0.0 0.0 0.0 208.0733431451781 208.0733431451781 60.91592278318394 0.0 0.0 0.0 0 1.066901560044258 2.0 0.0 0.75 [MN]PN{I|L}NEAQ[HV]EN{I|L} 4.8366 - 1496 + 1 1.992 83825.8 0.6600000262260437 4304 3507 7798 DOHH2_400M_050219_2,7813 DOHH2_400M_050219_2,7813, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7814 43.106 175.0 542530.0 25 0 30973.0 + 25972 NLPPHIIRL 9 103 358.2250351249064 1071.653275974919 3 358.2248107790947 MULTI CID FTMS 0 0 0 7798 101543.140625 0.1799222775836338 -3 0.3077507019042969 16 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 12.872603262515298 0.4882369880199512 2 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}R{I|L} 9 0 + 50.912 0.0 0.0 4.7508 4.7508 85.876 0.0 0.0 0.0 38.14794195648428 2.139107961803859 2.139107961803859 18.750612633917 0 0.2742275032520141 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}R{I|L} 4.7508;3.0011 +;- + 75 + 1 1.992 86593.7 1.0 4305 3507 7798 DOHH2_400M_050219_2,7814 DOHH2_400M_050219_2,7814,NLPPHIIRL False True NLPPHIIRL 43.106355 358.224810779095 20242194.5 7798.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 4.320221424102783 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7815 43.12 800.0 128550.0 25 0 4998.4 -1 0 111 873.914100818394 1745.813648703588 2 874.4127685427666 MULTI CID FTMS 0 0 0 -1 0 17 2 [MN]PN{I|L}NEA[RH]MN{I|L}S 14 -1 74.085 0.0 0.0 4.2436 0.0 0.0 0.0 121.04121576480702 121.04121576480702 49.3090942970574 0.0 0.0 0.0 0 0.7059771852360797 1.3979400086720375 0.0 1.5356668758921828 [MN]PN{I|L}NEA[RH]MN{I|L}S 4.2436 - 4239 + 1 1.992 70828.0 0.6100000143051147 4306 3507 7798 DOHH2_400M_050219_2,7815 DOHH2_400M_050219_2,7815, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7816 43.135 800.0 182870.0 25 0 16099.0 + 11598 GKSYIIQL 8 151 461.2740673895096 920.5335818458192 2 461.2745544314384 MULTI CID FTMS 0 0 0 7798 89862.984375 1.0 0 0.0 18 Unmodified _GKSYIIQL_ REV__ENSG00000141506|ENST00000447110|PIK3R5;REV__ENST00000578515.5_1_17:8785060-8814811:-|nuORF;REV__nc|ENSG00000141506|Q8WYR1-2|PIK3R5 21.74664581756881 0.5868176546531598 2 {I|L} 1 -1 15.485 0.0 0.0 1.6821 0.0 0.0 789.4385328729662 0.0 789.4385328729662 0.0 -1.553046041627372 -1.553046041627372 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.6821 + + 332 + 1 1.992 113403.9 0.4199999868869781 4307 3507 7798 DOHH2_400M_050219_2,7816 DOHH2_400M_050219_2,7816,GKSYIIQL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7817 43.143 413.0 291930.0 25 0 15717.0 + 34169 SLMKRWSQL 9 152 574.8162400624728 1147.6179271917456 2 574.8153564333916 MULTI CID FTMS 0 0 0 7798 125681.421875 1.0 0 0.0 19 Unmodified _SLMKRWSQL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 43.9818466556824 0.0535980856389242 2 {I|L}SMKDWKQ{I|L} 9 4 + 83.902 0.0 0.0 7.311 7.311 93.155 0.0 0.0 0.0 67.70455512309964 10.335230341436628 10.335230341436628 11.950462572043875 0 1.0994850021680094 2.0 0.4247425010840047 0.5629529932484498 {I|L}SMKDWKQ{I|L};{I|L}SMKDWK[AG]{I|L};{I|L}SMKWRSQ{I|L};{I|L}SMKWGVSQ{I|L};{I|L}S{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}WKQ{I|L};{I|L}SMKWG[K{I|L}]W;{I|L}SMKWRS[AG]{I|L};{I|L}SMKWG[WK]{I|L};{I|L}SMKWGVS[AG]{I|L};{I|L}S{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}WK[AG]{I|L} 7.311;6.2697;6.005;5.7427;5.4148;5.3487;4.9637;4.8474;4.7051;4.3735 -;-;-;-;-;-;-;-;-;- 1725 + 1 1.992 95562.4 1.0 4308 3507 7798 DOHH2_400M_050219_2,7817 DOHH2_400M_050219_2,7817,SLMKRWSQL True True SLMKRWSQL 43.142572 574.815356433392 1968233.875 7798.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 4.442649602890015 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7819 43.147 82.0 612400.0 25 0 69175.0 + 36750 TDVYVNNEW 9 84 570.253147077898 1138.491741222596 2 570.2540161013603 MULTI CID FTMS 0 0 0 7818 438328.59375 0.4807649661135867 1 -0.0764503479003906 1 Unmodified _TDVYVNNEW_ ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A 21.74664581756881 0.2544899275067181 2 {[ES]|[DT]|[{I|L}C]}VYV 5 4 19.563 0.0 0.0 1.7183 0.0 0.0 0.0 558.1930711388646 558.1930711388646 3.6328751293413504 0.0 0.0 0.0 0 0.0 0.0 0.5610312860818771 0.0 + {[ES]|[DT]|[{I|L}C]}VYV 1.7183 + + 118 1 1.992 46831.5 1.0 4309 3508 7818 DOHH2_400M_050219_2,7819 DOHH2_400M_050219_2,7819,TDVYVNNEW False True TDVYVNNEW 43.147378 570.25401610136 13058099.0 7818.0 ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 4.179261684417725 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7820 43.151 175.0 407970.0 25 0 74383.0 + + -1 SEDGTVRLW 9 95 531.8167073282751 1061.6188617233502 2 531.8170043826103 MULTI CID FTMS 0 0 0 7818 327192.96875 0.8549578807589678 -1 0.123748779296875 2 Oxidation (M) _DTVKVM(Oxidation (M))KLI_ ENSG00000148835|ENST00000369839|TAF5 3.944395688203298 0.7769873103969335 2 DGTVV 5 -1 15.573 0.0 0.0 1.4669 0.0 0.0 216.1788604369229 371.1711825006469 587.3500429375698 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DGTVV 1.4669 - 82 + 1 1.992 60942.4 1.0 4310 3508 7818 DOHH2_400M_050219_2,7820 DOHH2_400M_050219_2,7820,DTVKVMKLI False False SEDGTVRLW 43.150784 531.81700438261 838189.25 7818.0 ENSG00000148835|ENST00000369839|TAF5 5.106287320454915 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7821 43.153 81.0 881940.0 25 0 155370.0 + 9460 FLDDGHTFNY 10 98 614.7670572620019 1227.5195615908035 2 614.7675048708916 MULTI CID FTMS 0 0 0 7818 599748.5 0.6326666603813006 -1 0.123748779296875 3 Unmodified _FLDDGHTFNY_ ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB 61.60191391372663 0.0323840705564037 2 YT{M(Oxidation (M))|F}N{I|L}{M(Oxidation (M))|F}Y 7 8 49.055 0.0 0.0 3.9963 0.0 0.0 261.0642262189469 0.0 261.0642262189469 0.0 14.458457507232332 0.0 0.0 0 0.4247425010840047 0.0 0.805462187404089 0.3054621874040891 YT{M(Oxidation (M))|F}N{I|L}{M(Oxidation (M))|F}Y 3.9963 - 671 1 1.992 58438.9 1.0 4311 3508 7818 DOHH2_400M_050219_2,7821 DOHH2_400M_050219_2,7821,FLDDGHTFNY True True FLDDGHTFNY 43.152638 614.767504870892 11569273.0 7818.0 nc|ENSG00000089597|Q14697-2|GANAB;;ENSG00000089597|ENST00000356638|GANAB 7.724863688151042 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7822 43.156 151.0 478760.0 25 0 115550.0 + 28672 PVPITTAL 8 78 406.2483238056012 810.4820946780025 2 406.2485534548759 MULTI CID FTMS 0 0 0 7818 425569.6875 0.2036266706061536 -2 0.2676658630371094 4 Unmodified _PVPITTAL_ REV__ENSG00000114859|ENST00000265593|CLCN2;REV__nc|ENSG00000114859|P51788-3|CLCN2;REV__nc|ENSG00000114859|P51788-4|CLCN2;REV__nc|ENSG00000114859|P51788-5|CLCN2 0.7936320650641473 0.8195151834710337 2 P 1 -1 0.48455 0.0 0.0 0.059785 0.0 0.0 590.3504703877666 120.05084406070546 710.401314448472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.059785 + + 8 + 1 1.992 61478.2 1.0 4312 3508 7818 DOHH2_400M_050219_2,7822 DOHH2_400M_050219_2,7822,PVPITTAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7823 43.16 235.0 465630.0 25 0 67906.0 + + 4956 DPGLGVLRKTAL 12 104 620.374766416969 1238.734979900738 2 620.3744384646416 MULTI CID FTMS 0 0 0 7818 269747.875 1.0 0 0.0 5 Unmodified _DGPLFPVRLLL_ ENST00000487264.5_1_19:59086841-59086880:+|nuORF 15.248480904072842 0.7179608125786238 2 DPG{I|L}GV{I|L}R[KT][{I|L}A] 12 -1 + 97.01 0.0 0.0 7.8314 7.8314 90.675 0.0 0.0 0.0 80.81215024481537 2.649087242336776 2.649087242336776 9.098233696509112 0 2.3494850021680094 1.6989700043360187 1.048455006504028 0.0 DPG{I|L}GV{I|L}R[KT][{I|L}A];DPG{I|L}GV{I|L}[VG][KT][{I|L}A];DPG{I|L}R{I|L}R[KT][{I|L}A];DPG{I|L}R{I|L}[VG][KT][{I|L}A];DP{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}R[KT][{I|L}A];D{I|L}[PG]GV{I|L}R[KT][{I|L}A];D{I|L}[PG]R{I|L}R[KT][{I|L}A];D{I|L}[NP]V{I|L}R[KT][{I|L}A] 7.8314;7.0969;6.894;6.1571;4.9983;4.2032;3.2658;3.0444 -;-;-;-;-;-;-;- 268 + 1 1.992 85797.8 1.0 4313 3508 7818 DOHH2_400M_050219_2,7823 DOHH2_400M_050219_2,7823,DGPLFPVRLLL False False DPGLGVLRKTAL 43.160061 620.374438464642 1598382.5 7818.0 ENST00000487264.5_1_19:59086841-59086880:+|nuORF 9.134661356608072 2.0 False 12.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 7824 43.168 458.0 330360.0 25 0 65478.0 + 42647 VTVPKTIA 8 110 414.761996926222 827.5094409192441 2 414.7617065310478 MULTI CID FTMS 0 0 0 7818 240981.734375 0.2701629270391998 -2 0.2676658630371094 6 Unmodified _VTVPKTIA_ REV__ENSG00000186472|ENST00000333891|PCLO;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__PCLO|p.V3720Sfs*2|1|0.13|ENSG00000186472|chr7:82916828-82916829|-/T|frameshift_variant 9.347437153973935 0.7675937258251505 2 {[TV]|[{I|L}S]}DV 4 -1 13.867 0.0 0.0 1.6757 0.0 0.0 0.0 410.2679607769191 410.2679607769191 5.283030065732234 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.2887254899964357 0.0 {[TV]|[{I|L}S]}DV 1.6757 - 41 1 1.992 120120.6 1.0 4314 3508 7818 DOHH2_400M_050219_2,7824 DOHH2_400M_050219_2,7824,VTVPKTIA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7825 43.173 246.0 319160.0 25 0 32877.0 + 39813 VETPGRELW 9 82 543.7823916430173 1085.5502303528344 2 543.7831909060478 MULTI CID FTMS 0 0 0 7818 207030.890625 0.911535435605998 -1 0.123748779296875 7 Unmodified _VETPGRELW_ ENSG00000177732|ENST00000342665|SOX12 40.23920728925047 0.0741434193262949 2 VETP 4 5 66.428 0.0 0.0 6.1193 0.0 0.0 0.0 656.317481192175 656.317481192175 35.25698788007091 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.75 0.0 + VETP 6.1193 + + 626 + 1 1.992 66704.0 1.0 4315 3508 7818 DOHH2_400M_050219_2,7825 DOHH2_400M_050219_2,7825,VETPGRELW True True VETPGRELW 43.17278 543.783190906048 1630678.5 7818.0 ENSG00000177732|ENST00000342665|SOX12 6.214988231658936 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7826 43.187 800.0 169550.0 25 0 24967.0 -1 0 127 479.2777343863049 478.27045791970494 1 480.2797119021416 MULTI CID FTMS 0 0 0 7818 136905.796875 0.3974965077171376 5 -0.43133544921875 8 2 V{I|L} 2 -1 17.959 0.0 0.0 3.7549 0.0 0.0 248.10683594880493 0.0 248.10683594880493 0.0 5.740312677277188 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L} 3.7549 - 27 + 1 1.992 105230.3 0.5299999713897705 4316 3508 7818 DOHH2_400M_050219_2,7826 DOHH2_400M_050219_2,7826, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7827 43.2 800.0 141790.0 25 0 13482.0 + 32944 SELKGMASW 9 125 504.7443972189207 1007.4742415046412 2 504.7448303103447 MULTI CID FTMS 0 0 0 7818 105046.2890625 1.0 0 0.0 9 Unmodified _SELKGMASW_ ENSG00000053900|ENST00000315368|ANAPC4;nc|ENSG00000053900|Q9UJX5-2|ANAPC4;nc|ENSG00000053900|Q9UJX5-3|ANAPC4 61.60191391372663 0.0251951588191061 2 S{I|L}ESW 5 5 44.557 0.0 0.0 4.4227 0.0 0.0 387.1932545392594 0.0 387.1932545392594 0.0 23.86139537870969 0.0 0.0 0 0.9247425010840048 0.0 0.6382104921644451 0.0 S{I|L}ESW 4.4227 - 661 1 1.992 89369.7 0.4600000083446502 4317 3508 7818 DOHH2_400M_050219_2,7827 DOHH2_400M_050219_2,7827,SELKGMASW True True SELKGMASW 43.200409 504.744830310345 617513.8125 7818.0 ENSG00000053900|ENST00000315368|ANAPC4;;nc|ENSG00000053900|Q9UJX5-3|ANAPC4;;nc|ENSG00000053900|Q9UJX5-2|ANAPC4 7.880758126576741 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7828 43.205 257.0 302340.0 25 0 26089.0 -1 VMAPRTVLL 9 107 508.2998573973431 1014.5851618614862 2 508.3022643923759 MULTI CID FTMS 0 0 0 7818 152404.28125 0.3700961905856846 2 -0.1398963928222656 10 Oxidation (M) _VM(Oxidation (M))APRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 20.41453444215458 0.284085796332423 2 V{M(Oxidation (M))|F}A 3 -1 30.005 0.0 0.0 2.9574 0.0 0.0 0.0 694.426709904741 694.426709904741 14.771212547196622 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 V{M(Oxidation (M))|F}A 2.9574 + + 97 + 1 1.992 67051.1 1.0 4318 3508 7818 DOHH2_400M_050219_2,7828 DOHH2_400M_050219_2,7828,VMAPRTVLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7829 43.219 800.0 81800.0 25 0 8540.3 -1 0 81 1031.4503151712272 3091.329116113882 3 1032.121020495892 MULTI CID FTMS 0 0 0 7818 98658.03125 0.1284499813329783 6 -0.5270118713378906 11 2 VSQPS 5 -1 15.846 0.0 0.0 0.5126 0.0 0.0 2141.840054689857 448.1843660943969 2590.024420784254 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 VSQPS 0.5126 - 1461 + 1 1.992 49443.3 0.550000011920929 4319 3508 7818 DOHH2_400M_050219_2,7829 DOHH2_400M_050219_2,7829, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7831 43.232 526.0 169980.0 25 0 17398.0 7129 EEMSTKVYL 9 124 550.2689371712797 1098.5233214093594 2 550.2688476443291 MULTI CID FTMS 0 0 0 7830 135809.03125 0.3417610059134185 2 -0.1398124694824218 1 Unmodified _EEMSTKVYL_ ENSG00000170175|ENST00000306071|CHRNB1 26.88365393820708 0.1891292719743517 2 EEQT{M(Oxidation (M))|F}AV{I|L}Y 9 6 + 60.696 0.0 0.0 5.5252 5.5252 82.644 0.0 0.0 0.0 10.123045056675451 11.0827208845118 10.123045056675451 7.2184874961635614 0 0.8935078169319297 1.3010299956639813 1.610924374808178 0.0 EEQT{M(Oxidation (M))|F}AV{I|L}Y;EETQ{M(Oxidation (M))|F}AV{I|L}Y;EE[AG]T{M(Oxidation (M))|F}AV{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ET{M(Oxidation (M))|F}AV{I|L}Y;EET{M(Oxidation (M))|F}QAV{I|L}Y;EET[AG]{M(Oxidation (M))|F}AV{I|L}Y;EEQY[VG]V{I|L}Y;{[ET]|[MV]}EQ{M(Oxidation (M))|F}AV{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EYRV{I|L}Y;EET{M(Oxidation (M))|F}[AG]AV{I|L}Y 5.5252;4.8681;4.687;4.6037;4.4171;4.0299;3.8016;3.7408;3.7232;3.5788 -;-;-;-;-;-;-;-;-;- 508 1 1.992 69958.3 1.0 4320 3509 7830 DOHH2_400M_050219_2,7831 DOHH2_400M_050219_2,7831,EEMSTKVYL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7832 43.234 78.0 674320.0 25 0 46771.0 + 26415 NTDPSIVMTY 10 94 570.7656946908764 1139.5168364485528 2 570.7666503787041 MULTI CID FTMS 0 0 0 7830 607793.5625 0.4709132631611162 -2 0.2001991271972656 2 Unmodified _NTDPSIVMTY_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF 44.391923383255 0.1130657680819667 2 V[{I|L}T]MTY 6 5 37.312 0.0 0.0 3.2744 0.0 0.0 413.1607147583704 0.0 413.1607147583704 0.0 13.476760142375989 0.0 0.0 0 0.0 0.0 1.4916440611282626 0.0 V[{I|L}T]MTY 3.2744 - 229 + 1 1.992 46123.1 1.0 4321 3509 7830 DOHH2_400M_050219_2,7832 DOHH2_400M_050219_2,7832,NTDPSIVMTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7833 43.241 390.0 455420.0 25 0 65381.0 + 25976 NLPPHIIRL 9 106 536.8346862566455 1071.6548195800908 2 536.8350707888603 MULTI CID FTMS 0 0 0 7830 271944.96875 1.0 0 0.0 3 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 33.4449034751529 0.1114409586740657 2 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}R{I|L} 9 0 + 71.261 0.0 0.0 6.6496 6.6496 93.633 0.0 0.0 0.0 57.28157370620036 11.50243175605042 11.50243175605042 23.2403126772772 0 0.9247425010840048 2.0 0.0 0.6989700043360187 + + {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}R{I|L} 6.6496;4.481 +;- + 151 + 1 1.992 139644.8 1.0 4322 3509 7830 DOHH2_400M_050219_2,7833 DOHH2_400M_050219_2,7833,NLPPHIIRL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7834 43.255 800.0 162380.0 25 0 11330.0 + 23163 LSQLWGRL 8 138 486.7839264875759 971.5533000419518 2 486.7838317751884 MULTI CID FTMS 0 0 0 7830 95054.65625 0.8633222185380254 -3 0.3441162109375 4 Unmodified _LSQLWGRL_ REV__ENSG00000171451|ENST00000310045|DSEL 21.74664581756881 0.5868176546531598 2 {[TV]|[{I|L}S]}Q{I|L}QA 6 -1 25.022 0.0 0.0 2.5755 0.0 0.0 0.0 328.1754673605644 328.1754673605644 13.032667135606069 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3859084917177392 0.0 {[TV]|[{I|L}S]}Q{I|L}QA 2.5755 - 254 1 1.992 101716.0 0.4300000071525574 4323 3509 7830 DOHH2_400M_050219_2,7834 DOHH2_400M_050219_2,7834,LSQLWGRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7835 43.269 800.0 109060.0 25 0 10850.0 + -1 KWFCFRKWFYM 11 89 857.9008790951956 1713.787205257191 2 858.4037963747978 MULTI CID FTMS 0 0 0 7830 81513.734375 0.0968341424502067 -8 0.6599693298339844 5 Carbamidomethyl (C),Oxidation (M) _KWFC(Carbamidomethyl (C))FRKWFYM(Oxidation (M))_ REV__ENSG00000121446|ENST00000294854|RGSL1;REV__nc|ENSG00000121446|A5PLK6-2|RGSL1;REV__nc|ENSG00000121446|A5PLK6-3|RGSL1 0.3070304955306653 0.8736993455979228 2 [NP]{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L}D[WH] 15 -1 + 56.621 0.0 0.0 3.3038 3.3038 66.135 0.0 0.0 0.0 2.340832060333682 35.40948200479491 2.340832060333682 0.2802872360024366 0 0.0 1.154901959985743 0.0 0.0 [NP]{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L}D[WH];[NP]{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L}DV[HS];{[QV]|[N{I|L}]|[RA]|[KV]}PNA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L}DD[HA];[NP]{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TWN{I|L}DD[HA];[MN]{[ES]|[DT]|[{I|L}C]}V[RK]DAN{I|L}DD[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L}DV[HS];[NP]{[{M(Oxidation (M))|F}C]|[YS]}V[RK]DAN{I|L}DD[HA];[NP]{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TWN{I|L}DV[HS];[NP]{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAGG{I|L}D[WH];[NP]{I|L}GGA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L}D[WH] 3.3038;3.2875;3.1345;3.1282;3.0512;2.9023;2.896;2.896;2.7769;2.7769 -;-;-;-;-;-;-;-;-;- 1399 1 1.992 62409.7 0.5799999833106995 4324 3509 7830 DOHH2_400M_050219_2,7835 DOHH2_400M_050219_2,7835,KWFCFRKWFYM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7836 43.282 800.0 144090.0 25 0 13016.0 -1 0 103 893.912421546487 1785.810290159774 2 894.4135009646416 MULTI CID FTMS 0 0 0 7830 130604.9375 0.9284858335284638 -1 0.0764503479003906 6 2 [MN]PN{I|L}NEEQ[C(Carbamidomethyl (C))S][{I|L}P]{I|L}Q 15 -1 + 83.845 0.0 0.0 4.695 4.695 85.789 0.0 0.0 0.0 61.45394248918264 7.445405118435218 7.445405118435218 19.77674928914496 0 1.2931576817365436 1.5228787452803376 0.0 1.1861818737241734 [MN]PN{I|L}NEEQ[C(Carbamidomethyl (C))S][{I|L}P]{I|L}Q;[NP]{I|L}N[HN]{M(Oxidation (M))|F}HEN{I|L}[DP][EP];[NP]{I|L}N[HN]{M(Oxidation (M))|F}HEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V[C(Carbamidomethyl (C))S]QEEN{I|L}[DP][EP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V[C(Carbamidomethyl (C))S]QEEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}N[HN]{M(Oxidation (M))|F}HE[RH]Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V[C(Carbamidomethyl (C))S]QEE[RH]Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.695;3.5876;3.1072;2.8334;2.353;1.9146;1.1603 -;-;-;-;-;-;- 717 + 1 1.992 83191.7 0.6600000262260437 4325 3509 7830 DOHH2_400M_050219_2,7836 DOHH2_400M_050219_2,7836, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7838 43.295 565.0 210940.0 25 0 22459.0 + 33830 SLDVGGPLRY 10 120 538.7904762877445 1075.5663996422888 2 538.7907592654228 MULTI CID FTMS 0 0 0 7837 128163.890625 0.0587653689288002 4 -0.387115478515625 1 Unmodified _SLDVGGPLRY_ ENSG00000176894|ENST00000317479|PXMP2 51.629811660486645 0.0705852162080619 2 {[TV]|[{I|L}S]}DVGG[{I|L}P]RY 10 0 + 70.182 0.0 0.0 6.5251 6.5251 85.689 0.0 0.0 0.0 46.77903232049481 10.528419686577806 10.528419686577806 6.53212513775344 0 1.274227503252014 2.0 0.0 0.3494850021680094 + + {[TV]|[{I|L}S]}DVGG[{I|L}P]RY;{[TV]|[{I|L}S]}DVN[{I|L}P]RY;{[TV]|[{I|L}S]}DV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG]T{I|L};{[TV]|[{I|L}S]}DV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[TV]|[{I|L}S]}[PA];{[TV]|[{I|L}S]}DV[TP][KC]T{I|L};{[TV]|[{I|L}S]}DV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{I|L}A][PS];{[TV]|[{I|L}S]}DV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{I|L}T][PG];{[TV]|[{I|L}S]}DV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[TA][VP];{[TV]|[{I|L}S]}EAAG[{I|L}P]RY;{[TV]|[{I|L}S]}E[QA][{I|L}P]RY 6.5251;5.9178;4.2471;4.2202;3.8035;3.5982;3.5704;3.3978;3.2971;2.6898 +;-;-;-;-;-;-;-;-;- + 546 + 1 1.992 97068.1 1.0 4326 3510 7837 DOHH2_400M_050219_2,7838 DOHH2_400M_050219_2,7838,SLDVGGPLRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7839 43.297 119.0 355500.0 25 0 56009.0 15737 IRMVCKIH 8 73 500.2829245958238 998.5512962584476 2 500.2832519412041 MULTI CID FTMS 0 0 0 7837 328426.625 0.8571489157563542 2 -0.1603584289550781 2 Unmodified _IRMVCKIH_ ENST00000422447.7_1_11:18428940-18429036:+|nuORF 2.302733041254933 0.8103549651115762 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.992 38159.5 1.0 4327 3510 7837 DOHH2_400M_050219_2,7839 DOHH2_400M_050219_2,7839,IRMVCKIH False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7840 43.304 366.0 251880.0 25 0 31054.0 16825 KHVLSERS 8 116 478.26899917837926 954.5234454235584 2 478.2693359255791 MULTI CID FTMS 0 0 0 7837 215511.390625 0.7940875499732861 -2 0.1398963928222656 3 Unmodified _KHVLSERS_ ENSG00000105053|ENST00000316763|VRK3;ENST00000594090.5_1_19:50491627-50519408:-|nuORF;ENST00000600284.5_1_19:50490096-50500767:-|nuORF;nc|ENSG00000105053|Q8IV63-2|VRK3;nc|ENSG00000105053|Q8IV63-3|VRK3 7.289230182591677 0.7800870086367542 2 W 1 8 11.783 0.0 0.0 1.2344 0.0 0.0 750.4333860747289 0.0 750.4333860747289 0.0 2.574549078045312 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.2344 - 36 + 1 1.992 77396.3 1.0 4328 3510 7837 DOHH2_400M_050219_2,7840 DOHH2_400M_050219_2,7840,KHVLSERS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7841 43.309 255.0 260350.0 25 0 13184.0 + 7989 EMARKINFL 9 105 561.3095229578968 1120.6044929825937 2 561.3106567263603 MULTI CID FTMS 0 0 0 7837 148435.40625 1.0 0 0.0 4 Unmodified _EMARKINFL_ ENSG00000266472|ENST00000614145|MRPS21 36.12702656103203 0.0967173616627612 2 {I|L}N{I|L}{M(Oxidation (M))|F} 4 7 21.727 0.0 0.0 1.9388 0.0 0.0 615.3179798810562 0.0 615.3179798810562 0.0 1.025684359364405 0.0 0.0 0 0.5044321917401079 0.0 0.0 0.3494850021680094 {I|L}N{I|L}{M(Oxidation (M))|F} 1.9388 - 177 1 1.992 57270.4 1.0 4329 3510 7837 DOHH2_400M_050219_2,7841 DOHH2_400M_050219_2,7841,EMARKINFL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7842 43.318 541.0 255690.0 25 0 14057.0 29534 QLMYWPEVI 9 144 589.7989408800188 1177.5833288268375 2 589.8002197146416 MULTI CID FTMS 0 0 0 7837 159248.390625 0.815992869277534 -1 0.063446044921875 5 Unmodified _QLMYWPEVI_ ENSG00000188649|ENST00000646931|CC2D2B 74.42276476219924 0.019389277360085 2 [Q{I|L}]MR{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{M(Oxidation (M))|F}{I|L} 9 4 + 66.579 0.0 0.0 5.6539 5.6539 76.312 0.0 0.0 0.0 11.41966006925606 11.41966006925606 11.41966006925606 1.346682531158919 0 1.0 1.6989700043360187 0.6747425010840047 0.9531198197908842 [Q{I|L}]MR{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{M(Oxidation (M))|F}{I|L};[Q{I|L}]MR{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}EQ{I|L};[Q{I|L}]MR{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}MQ{I|L};[Q{I|L}]MR{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{[CA]|SS}{I|L};[Q{I|L}]MR{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GG{M(Oxidation (M))|F}{I|L};[Q{I|L}]MR{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E[AG]{I|L};Q{I|L}MP[{I|L}P][{M(Oxidation (M))|F}E]G{M(Oxidation (M))|F};[Q{I|L}]M[DV][KA]N{M(Oxidation (M))|F}{I|L};[Q{I|L}]MR{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}M[AG]{I|L};[Q{I|L}]M[DV][KG]{M(Oxidation (M))|F}Q{I|L} 5.6539;5.5395;5.1481;4.978;4.8719;4.7576;4.6841;4.6163;4.3662;4.306 -;-;-;-;-;-;-;-;-;- 2615 1 1.992 105159.3 1.0 4330 3510 7837 DOHH2_400M_050219_2,7842 DOHH2_400M_050219_2,7842,QLMYWPEVI True False QLMPRYEEL 43.318265 589.800219714642 975970.625 7837.0 ENSG00000164880|ENST00000404767|INTS1 5.836351871490479 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7843 43.324 311.0 155440.0 25 0 48925.0 33719 SLAALLLLP 9 58 455.800323355893 909.586093778586 2 455.8009826540947 MULTI CID FTMS 0 0 0 7837 136901.578125 1.0 0 0.0 6 Unmodified _SLAALLLLP_ ENSG00000078549|ENST00000304166|ADCYAP1R1;nc|ENSG00000078549|P41586-2|ADCYAP1R1;nc|ENSG00000078549|P41586-3|ADCYAP1R1;nc|ENSG00000078549|P41586-4|ADCYAP1R1;nc|ENSG00000078549|P41586-5|ADCYAP1R1 2.059750862983233 0.8427793054688888 2 {I|L} 1 8 10.379 0.0 0.0 1.141 0.0 0.0 778.4908464414751 0.0 778.4908464414751 0.0 10.37860356969059 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.141 + + 1 + 1 1.992 45550.4 1.0 4331 3510 7837 DOHH2_400M_050219_2,7843 DOHH2_400M_050219_2,7843,SLAALLLLP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7844 43.338 800.0 108500.0 25 0 16252.0 + + 24431 MGMERMPL 8 108 482.72346254137193 963.432372149544 2 482.7242919802666 MULTI CID FTMS 0 0 0 7837 116893.8359375 1.0 0 0.0 7 Unmodified _MGMNVWIN_ chr11:126304233-126306570|19|15.89|0.64|4.63|+|1|None,DCPS|2;ENST00000263579.4_1_11:126176468-126176510:+|nuORF 19.438996006549623 0.6237395211498085 2 MGMERMP{I|L} 8 -1 + 75.014 0.0 0.0 7.7861 7.7861 88.994 0.0 0.0 0.0 63.42024246406447 5.610441338120481 5.610441338120481 6.8322096673914245 0 1.5994850021680094 1.3979400086720375 0.0 0.0 MGMERMP{I|L};MGMEVGMP{I|L};MGMER[{I|L}P]M;MG[KA]C(Carbamidomethyl (C))GMP{I|L};MGMEVG[{I|L}P]M;M[KQ]C(Carbamidomethyl (C))GMP{I|L};{[MG]|[TS]}MERM[{I|L}P];M[WM]VGMP{I|L};[KQ]MC(Carbamidomethyl (C))GMP{I|L};{[MG]|[TS]}{[RE]|[WV]}MM[{I|L}P] 7.7861;7.077;5.6382;5.2884;4.9291;2.7241;2.6151;2.5413;2.4116;2.0828 -;-;-;-;-;-;-;-;-;- 141 + 1 1.992 71045.6 0.4900000095367431 4332 3510 7837 DOHH2_400M_050219_2,7844 DOHH2_400M_050219_2,7844,MGMNVWIN False False MGMERMPL 43.337752 482.724291980267 941957.125 7837.0 chr11:126304233-126306570|19|15.89|0.64|4.63|+|1|None,DCPS|2;;ENST00000263579.4_1_11:126176468-126176510:+|nuORF 6.799222946166992 2.0 False 8.0 True non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_2 7845 43.345 408.0 158920.0 25 0 16914.0 + 5985 DREDLVEL 8 104 494.7508677417324 987.4871825502648 2 494.7510253787041 MULTI CID FTMS 0 0 0 7837 108909.359375 0.7932170611225147 -1 0.063446044921875 8 Unmodified _DREDLVEL_ ENSG00000022976|ENST00000442396|ZNF839;nc|ENSG00000022976|A8K0R7-2|ZNF839;nc|ENSG00000022976|A8K0R7|ZNF839 70.71552829651908 0.111000043122623 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[NG]S{I|L}V{[QN]|[E{I|L}]|[KN]} 9 4 + 27.994 0.0 0.0 2.8349 2.8349 70.049 0.0 0.0 0.0 4.238088903435859 7.40301504348546 4.238088903435859 3.696662315049945 0 0.3494850021680094 0.0 1.4604093769761874 1.4876954943324543 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[NG]S{I|L}V{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EE{I|L}V{[QN]|[E{I|L}]|[KN]} 2.8349;2.4605 -;- 81 1 1.992 53862.4 1.0 4333 3510 7837 DOHH2_400M_050219_2,7845 DOHH2_400M_050219_2,7845,DREDLVEL True True QENGSLVEI 43.345038 494.751025378704 984379.375 7837.0 ENSG00000163682|ENST00000295955|RPL9;;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;;ENST00000511075.5_1_4:39457912-39460059:-|nuORF 1.6458405653635662 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7846 43.359 800.0 252110.0 25 0 18445.0 -1 0 142 423.2734782562338 844.5324035792677 2 423.2736083865166 MULTI CID FTMS 0 0 0 7837 108490.71875 1.0 0 0.0 9 2 PPH{I|L}{I|L}R{I|L} 7 -1 + 69.893 0.0 0.0 8.2759 8.2759 88.26 0.0 0.0 0.0 43.6950936706654 11.804782212094338 11.804782212094338 5.897554856604174 0 0.91944517631652 0.9208187539523752 0.0 0.3054621874040891 PPH{I|L}{I|L}R{I|L};PP{I|L}H{I|L}R{I|L};PPH{I|L}R{I|L}{I|L};{I|L}A{M(Oxidation (M))|F}{I|L}{I|L}R{I|L};PP{I|L}HR{I|L}{I|L};P{I|L}PH{I|L}R{I|L};{I|L}PPH{I|L}R{I|L};{I|L}A{M(Oxidation (M))|F}{I|L}R{I|L}{I|L};P{I|L}PHR{I|L}{I|L};{I|L}PPHR{I|L}{I|L} 8.2759;7.5776;6.6364;6.0269;5.9381;5.68;5.3236;4.3874;4.0405;3.6841 -;-;-;-;-;-;-;-;-;- 228 + 1 1.992 157006.5 0.4199999868869781 4334 3510 7837 DOHH2_400M_050219_2,7846 DOHH2_400M_050219_2,7846, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7848 43.364 58.0 781160.0 25 0 149920.0 43397 WQRVILCK 8 69 523.3030520939583 1044.5915512547165 2 523.3038207888603 MULTI CID FTMS 0 0 0 7847 817918.4375 0.8456698330320507 2 -0.2150726318359375 1 Unmodified _WQRVILCK_ ENST00000441433.1_1_7:26961755-26962307:+|nuORF 0.7936320650641473 0.8195151834710337 2 H 1 8 5.4846 0.0 0.0 0.52504 0.0 0.0 522.3986934439728 382.09958826236567 904.4982817063384 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.52504 - 2 + 1 1.992 38622.5 1.0 4335 3511 7847 DOHH2_400M_050219_2,7848 DOHH2_400M_050219_2,7848,WQRVILCK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7849 43.368 223.0 320790.0 25 0 34224.0 8719 EVLKPKLL 8 96 470.3152380682801 938.6159232033602 2 470.3155395388603 MULTI CID FTMS 0 0 0 7847 231876.859375 0.5937747695920296 2 -0.2150726318359375 2 Unmodified _EVLKPKLL_ ENSG00000117151|ENST00000370630|CTBS 42.09456458481378 0.1992492688217789 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}PKK{I|L}{I|L} 8 2 + 53.185 0.0 0.0 5.6663 5.6663 75.369 0.0 0.0 0.0 36.98715432778343 13.910597642973777 13.910597642973777 0.5799194697768684 0 0.7302046884880937 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}PKK{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}KPK{I|L}{I|L} 5.6663;5.6045 -;+ + 132 + 1 1.992 62766.9 1.0 4336 3511 7847 DOHH2_400M_050219_2,7849 DOHH2_400M_050219_2,7849,EVLKPKLL False True DILPKKIL 43.367904 470.31553953886 3439858.25 7847.0 ENSG00000104472|ENST00000220913|CHRAC1 2.0894331336021423 2.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7850 43.372 219.0 302980.0 25 0 23868.0 + 24346 MELPHGGEGW 10 104 556.7457735098628 1111.4769940865256 2 556.7452880740166 MULTI CID FTMS 0 0 0 7847 278277.375 0.4728578471281597 -1 0.0763664245605468 3 Unmodified _MELPHGGEGW_ ENSG00000127564|ENST00000262300|PKMYT1;ENST00000575981.1_1_16:3022956-3024767:-|nuORF;nc|ENSG00000127564|Q99640-2|PKMYT1;nc|ENSG00000127564|Q99640-3|PKMYT1;nc|ENSG00000127564|Q99640-4|PKMYT1 68.08070601005525 0.0189984391031388 2 ME{I|L}{[{M(Oxidation (M))|F}D]|MM}[KS]GW 9 5 + 74.917 0.0 0.0 6.7403 6.7403 87.769 0.0 0.0 0.0 51.47363086350517 5.083559388717376 5.083559388717376 8.339993556128107 0 1.3807196863200843 1.6989700043360187 1.6549471895720984 0.0 ME{I|L}{[{M(Oxidation (M))|F}D]|MM}[KS]GW;ME{[CT]|[{M(Oxidation (M))|F}G]}{I|L}G{[ES]|[DT]|[{I|L}C]}GW;ME{[CT]|[{M(Oxidation (M))|F}G]}G{I|L}{[ES]|[DT]|[{I|L}C]}GW;ME{[CT]|[{M(Oxidation (M))|F}G]}{I|L}G{[WS]|[C(Carbamidomethyl (C)){I|L}]}W;ME{[CT]|[{M(Oxidation (M))|F}G]}GN[KS]GW;ME{[CT]|[{M(Oxidation (M))|F}G]}G{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}W;ME{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[ES]|[DT]|[{I|L}C]}GW;ME{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}N[KS]GW;ME{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}W;ME{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}GW 6.7403;5.99;5.8315;5.8315;5.7448;5.6731;5.6731;5.5864;5.5195;5.4023 -;-;-;-;-;-;-;-;-;- 927 + 1 1.992 59462.1 1.0 4337 3511 7847 DOHH2_400M_050219_2,7850 DOHH2_400M_050219_2,7850,MELPHGGEGW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7851 43.376 191.0 335790.0 25 0 34092.0 + -1 YGMPRQIL 8 86 489.2652999549621 976.5160469767244 2 489.2656127810478 MULTI CID FTMS 0 0 0 7847 198355.171875 0.343540644141397 -1 0.0763664245605468 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VCMLMLLL_ ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2;ENST00000478033.1_1_1:159888592-159888742:-|nuORF 24.20995872069341 0.5349487244130675 2 YGMP 4 -1 46.146 0.0 0.0 4.7256 0.0 0.0 0.0 525.3161104791624 525.3161104791624 23.17024086827658 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 YGMP 4.7256 - 179 + 1 1.992 51814.3 1.0 4338 3511 7847 DOHH2_400M_050219_2,7851 DOHH2_400M_050219_2,7851,VCMLMLLL False False YGMPRQIL 43.375712 489.265612781048 9403607.0 7847.0 ENSG00000158710|ENST00000368097|TAGLN2;;nc|ENSG00000158710|P37802-2|TAGLN2;;ENST00000478033.1_1_1:159888592-159888742:-|nuORF 5.540342966715495 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7852 43.381 259.0 367810.0 25 0 55816.0 + 1580 ALLERGYSL 9 98 511.2875221670736 1020.5604914009472 2 511.2874633669853 MULTI CID FTMS 0 0 0 7847 194259.84375 0.232459855589015 -1 0.0763664245605468 5 Unmodified _ALLERGYSL_ ENSG00000182199|ENST00000328923|SHMT2;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 79.59630418116434 0.0176145593575188 2 A{I|L}{I|L}E 4 5 67.18 0.0 0.0 6.5827 0.0 0.0 0.0 591.2886446588499 591.2886446588499 12.521890713348752 0.0 0.0 0.0 0 0.75 2.0 0.7742275032520141 0.0 + A{I|L}{I|L}E 6.5827 + + 599 + 1 1.992 79631.9 1.0 4339 3511 7847 DOHH2_400M_050219_2,7852 DOHH2_400M_050219_2,7852,ALLERGYSL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7853 43.387 331.0 118710.0 25 0 13713.0 + 33500 SIISDNKRV 9 75 516.295909720368 1030.5772665075358 2 516.2957031130791 MULTI CID FTMS 0 0 0 7847 202532.859375 0.6175201783429076 4 -0.3386955261230469 6 Unmodified _SIISDNKRV_ REV__ENSG00000164035|ENST00000296420|EMCN;REV__nc|ENSG00000164035|Q9ULC0-2|EMCN;REV__nc|ENSG00000164035|Q9ULC0-3|EMCN 7.289230182591677 0.6602208344931196 2 {I|L} 1 -1 9.3971 0.0 0.0 0.91183 0.0 0.0 899.4822022758937 0.0 899.4822022758937 0.0 6.29818655252878 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.91183 + + 12 + 1 1.992 35628.1 1.0 4340 3511 7847 DOHH2_400M_050219_2,7853 DOHH2_400M_050219_2,7853,SIISDNKRV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7854 43.393 361.0 345700.0 25 0 28863.0 + 6997 EEIPVSSHYF 10 113 604.2848711836715 1206.555189434143 2 604.2858154177666 MULTI CID FTMS 0 0 0 7847 160286.1875 0.4000849910660318 -1 0.0763664245605468 7 Unmodified _EEIPVSSHYF_ ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 58.6788170122104 0.0400518768368984 2 EE{I|L}PVSSH{M(Oxidation (M))|F}Y 10 2 + 61.13 0.0 0.0 5.0665 5.0665 79.005 0.0 0.0 0.0 18.32840510762193 5.440680443502757 5.440680443502757 5.440680443502757 0 0.7614393726401688 1.5228787452803376 0.3494850021680094 0.0 EE{I|L}PVSSH{M(Oxidation (M))|F}Y;EE{I|L}PVSSHY{M(Oxidation (M))|F};EE{I|L}PVS{[{M(Oxidation (M))|F}H]|[RQ]}SY;EE{I|L}PVSS{[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F};[VP]E[PG]C(Carbamidomethyl (C))VP{I|L}[HC];EE{I|L}[HM]VP{I|L}[HC];[VP]SSH[KC]P{I|L}[HC];[VP]E[PG][CG]VP{I|L}[HC];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}YSVP{I|L}[HC];{[QN]|[E{I|L}]|[KN]}QH[KC]P{I|L}[HC] 5.0665;4.6155;4.077;3.5777;3.5474;3.4035;2.9961;2.7908;2.644;2.6324 -;+;-;-;-;-;-;-;-;- + 931 + 1 1.992 93110.3 1.0 4341 3511 7847 DOHH2_400M_050219_2,7854 DOHH2_400M_050219_2,7854,EEIPVSSHYF True True EEIPVSSHYF 43.393049 604.285815417767 6247506.5 7847.0 ENST00000558825.5_1_15:91337395-91358506:+|nuORF;;ENSG00000197299|ENST00000355112|BLM;;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 6.322653929392497 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7855 43.407 800.0 129980.0 25 0 10076.0 -1 0 125 983.1207693028024 2946.340478508607 3 983.4530517458916 MULTI CID FTMS 0 0 0 7847 140658.40625 0.6893743177772377 -1 0.0763664245605468 8 2 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 6 -1 34.627 0.0 0.0 1.1752 0.0 0.0 0.0 2226.0256951436254 2226.0256951436254 15.241049764686135 0.0 0.0 0.0 0 1.0 2.0 0.0 0.4247425010840047 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 1.1752 - 970 1 1.992 70919.2 0.6100000143051147 4342 3511 7847 DOHH2_400M_050219_2,7855 DOHH2_400M_050219_2,7855, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7856 43.421 800.0 117430.0 25 0 14139.0 -1 RCHRRRRRCCC 11 99 866.9070133939276 1731.7994738546552 2 867.4005004763603 MULTI CID FTMS 0 0 0 7847 141797.9375 0.0180760571364686 21 -0.8474807739257812 9 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 2 [NP]{I|L}NM[RH]DAD{I|L}NP[EP] 15 -1 + 86.665 0.0 0.0 5.0043 5.0043 80.26 0.0 0.0 0.0 16.83175737152787 7.61760834195475 7.61760834195475 6.690067809585756 0 0.4247425010840047 1.154901959985743 0.3807196863200844 1.1989700043360187 [NP]{I|L}NM[RH]DAD{I|L}NP[EP];[NP]{I|L}NM[RH]DW{I|L}NP[EP];[NP]{I|L}NM[RH]WD{I|L}NP[EP];[NP]{I|L}GGM[RH]DAD{I|L}NP[EP];[NP]{I|L}NM[RH]DAD{I|L}GGP[EP];[NP]{I|L}NM[RH]WNNNP[EP];[NP][RH]{[ET]|[MV]}QDAD{I|L}NP[EP];[NP]M{[QV]|[N{I|L}]|[RA]|[KV]}[RH]DAD{I|L}NP[EP];[NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAD{I|L}NP[EP];[NP]{I|L}NM[RH]DW{I|L}GGP[EP] 5.0043;4.618;4.618;4.4829;4.4829;4.1989;4.1824;4.1676;4.1257;4.0954 -;-;-;-;-;-;-;-;-;- 1484 1 1.992 65898.5 0.6600000262260437 4343 3511 7847 DOHH2_400M_050219_2,7856 DOHH2_400M_050219_2,7856,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7857 43.429 465.0 224270.0 25 0 28134.0 26412 NTDPSIVMTY 10 132 578.7625311934776 1155.510509453755 2 578.7625610232353 MULTI CID FTMS 0 0 0 7847 131851.484375 1.0 0 0.0 10 Oxidation (M) _NTDPSIVM(Oxidation (M))TY_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF 51.629811660486645 0.0705852162080619 2 {M(Oxidation (M))|F}TY 3 7 26.436 0.0 0.0 2.2879 0.0 0.0 726.3562563793395 0.0 726.3562563793395 0.0 -0.8387241908740961 -0.8387241908740961 0.0 0 0.3494850021680094 0.0 0.6989700043360187 0.0 + {M(Oxidation (M))|F}TY 2.2879 + + 296 + 1 1.992 85242.1 1.0 4344 3511 7847 DOHH2_400M_050219_2,7857 DOHH2_400M_050219_2,7857,NTDPSIVMTY True False QLDRISVYY 43.428999 578.762561023235 856883.0 7847.0 ENST00000518096.1_1_8:30209523-30210210:+|nuORF;;ENSG00000196230|ENST00000327892|TUBB 4.50167973836263 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7858 43.443 800.0 202440.0 25 0 9872.0 -1 0 142 901.4455649675524 1800.8765770019045 2 901.4443237185478 MULTI CID FTMS 0 0 0 7847 93995.7890625 0.4759108769493759 -1 0.0763664245605468 11 2 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[{I|L}T]{M(Oxidation (M))|F}N{I|L}SQ 16 -1 + 122.04 0.0 0.0 6.7766 6.7766 78.457 0.0 0.0 0.0 21.52249673628745 12.05809428866324 12.05809428866324 0.2553103163733397 0 2.9921276860725623 2.0 1.7856668758921828 1.774227503252014 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[{I|L}T]{M(Oxidation (M))|F}N{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[YN]YY{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[WR]{M(Oxidation (M))|F}N{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NAD[YN]YY{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGAD[YN]YY{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[YN]MVSV[HT];{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQ[{I|L}T]{M(Oxidation (M))|F}N{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW[YN]YY{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[YN]MSVV[HT];{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW[WR]{M(Oxidation (M))|F}N{I|L}SQ 6.7766;6.7624;6.404;6.2609;6.2609;6.107;6.0323;6.0192;5.7285;5.6608 -;-;-;-;-;-;-;-;-;- 44395 + 1 1.992 108438.9 0.5600000023841858 4345 3511 7847 DOHH2_400M_050219_2,7858 DOHH2_400M_050219_2,7858, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7860 43.448 50.0 761850.0 25 0 180510.0 -1 VVVALTPA 8 50 406.2483238056012 810.4820946780025 2 406.2484619021416 MULTI CID FTMS 0 0 0 7859 1145744.875 0.5482162407544915 2 -0.2267570495605468 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VVVALTPA_ ENST00000532887.5_1_8:145582591-145582844:+|nuORF 0.7936320650641473 0.8195151834710337 2 P 1 -1 3.0989 0.0 0.0 0.38236 0.0 0.0 634.3771732686259 76.0249270074828 710.4021002761087 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.38236 + + 2 + 1 1.992 38161.4 1.0 4346 3512 7859 DOHH2_400M_050219_2,7860 DOHH2_400M_050219_2,7860,VVVALTPA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7861 43.45 104.0 424810.0 25 0 94262.0 + 11592 GKPSLLLT 8 67 414.761996926222 827.5094409192441 2 414.7617065310478 MULTI CID FTMS 0 0 0 7859 485833.40625 0.5446644137836418 2 -0.2267570495605468 2 Unmodified _GKPSLLLT_ REV__ENSG00000185522|ENST00000329451|LMNTD2;REV__ENST00000469990.1_1_11:555480-556365:-|nuORF 0.6903765706972694 0.8201419426409876 2 P 1 -1 0.71334 0.0 0.0 0.086203 0.0 0.0 629.3908628936566 98.03794275455311 727.4288056482097 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.086203 + + 4 + 1 1.992 39235.9 1.0 4347 3512 7859 DOHH2_400M_050219_2,7861 DOHH2_400M_050219_2,7861,GKPSLLLT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7862 43.454 190.0 760400.0 25 0 127160.0 + 25973 NLPPHIIRL 9 107 358.2250351249064 1071.653275974919 3 358.2254516482353 MULTI CID FTMS 0 0 0 7859 415542.59375 0.7362916829273587 2 -0.2267570495605468 3 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 17.44264345198275 0.3645313841742926 2 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}R{I|L}{I|L} 9 2 + 53.049 0.0 0.0 4.9502 4.9502 72.933 0.0 0.0 0.0 30.808549334416067 7.088616157006854 7.088616157006854 0.7918124604762511 0 0.25 1.5228787452803376 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}R{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PP{I|L}HR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PP{I|L}H{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PHR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PH{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PPHR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PPH{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}R{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}R{I|L} 4.9502;4.8763;4.6693;4.5954;4.3884;4.3145;4.1075;4.0336;3.2005;3.1266 -;+;-;-;-;-;-;-;-;- + 135 + 1 1.992 121262.1 1.0 4348 3512 7859 DOHH2_400M_050219_2,7862 DOHH2_400M_050219_2,7862,NLPPHIIRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7863 43.458 227.0 264900.0 25 0 53455.0 30097 QVFRLMRI 8 74 531.8167073282751 1061.6188617233502 2 531.8170654177666 MULTI CID FTMS 0 0 0 7859 300707.5 0.7857511361277604 3 -0.2547035217285156 4 Unmodified _QVFRLMRI_ ENSG00000124134|ENST00000537075|KCNS1 2.302733041254933 0.8103549651115762 2 {I|L} 1 7 9.2082 0.0 0.0 0.86737 0.0 0.0 930.5239805971768 0.0 930.5239805971768 0.0 7.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.86737 + + 4 + 1 1.992 55349.7 1.0 4349 3512 7859 DOHH2_400M_050219_2,7863 DOHH2_400M_050219_2,7863,QVFRLMRI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7864 43.465 373.0 156820.0 25 0 30642.0 + 37513 TLGTATREKI 10 85 545.3165366524856 1088.6185203717712 2 545.3170043826103 MULTI CID FTMS 0 0 0 7859 213165.78125 0.5245321426322216 7 -0.4067726135253906 5 Unmodified _TLGTATREKI_ REV__ENSG00000129003|ENST00000644861|VPS13C;REV__nc|ENSG00000129003|Q709C8-2|VPS13C;REV__nc|ENSG00000129003|Q709C8-3|VPS13C;REV__nc|ENSG00000129003|Q709C8-4|VPS13C 5.731851221503515 0.7001233259664787 2 Y 1 -1 11.99 0.0 0.0 1.1014 0.0 0.0 907.5439029174728 0.0 907.5439029174728 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1014 - 14 + 1 1.992 47764.4 1.0 4350 3512 7859 DOHH2_400M_050219_2,7864 DOHH2_400M_050219_2,7864,TLGTATREKI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7865 43.479 800.0 252850.0 25 0 20627.0 + 6904 EEFEKLYASY 10 156 639.7975254550201 1277.5804979768402 2 639.7985107302666 MULTI CID FTMS 0 0 0 7859 150321.5625 0.4663166174559415 -1 0.0839920043945312 6 Unmodified _EEFEKLYASY_ ENSG00000167325|ENST00000300738|RRM1 143.90916361153978 9.591654341469698e-05 2 EE{M(Oxidation (M))|F}EK{I|L}YASY 10 0 + 74.241 0.0 0.0 5.811 5.811 80.742 0.0 0.0 0.0 4.23902187720806 4.23902187720806 4.23902187720806 4.23902187720806 0 2.4489700043360187 1.5228787452803376 3.024227503252014 0.0 + + EE{M(Oxidation (M))|F}EK{I|L}YASY;EE{M(Oxidation (M))|F}P{I|L}[WH]ASY;EE{M(Oxidation (M))|F}PH[W{I|L}]ASY;EE{M(Oxidation (M))|F}EK{I|L}P{M(Oxidation (M))|F}[HC];[{M(Oxidation (M))|F}E]EEK{I|L}YASY;EE{M(Oxidation (M))|F}PNGS{I|L}GV{[ET]|[MV]};EE{M(Oxidation (M))|F}E[EP]{I|L}{[TV]|[{I|L}S]}W;EE{M(Oxidation (M))|F}E[EP]{I|L}GV{[ET]|[MV]};[HM]AY{I|L}KEHSY;EEVY[HC]{I|L}{[TV]|[{I|L}S]}W 5.811;5.4792;5.1922;4.4044;3.9921;3.9407;3.7149;3.6788;3.6627;3.6591 +;-;-;-;-;-;-;-;-;- + 22586 1 1.992 148873.9 0.6600000262260437 4351 3512 7859 DOHH2_400M_050219_2,7865 DOHH2_400M_050219_2,7865,EEFEKLYASY True True EEFEKLYASY 43.478724 639.798510730267 4799363.5 7859.0 ENSG00000167325|ENST00000300738|RRM1 8.316168308258057 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7866 43.487 452.0 215620.0 25 0 27863.0 + 9461 FLDDGHTFNY 10 111 614.7670572620019 1227.5195615908035 2 614.7675659060478 MULTI CID FTMS 0 0 0 7859 140874.75 0.1486068870777511 3 -0.2547035217285156 7 Unmodified _FLDDGHTFNY_ ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB 41.8396318013385 0.1381409678234242 2 {M(Oxidation (M))|F}{I|L}D{M(Oxidation (M))|F}DDNY 8 5 40.853 0.0 0.0 3.3281 0.0 0.0 180.08569524116598 0.0 180.08569524116598 0.0 24.157913024158685 0.0 0.0 0 0.0 0.0 1.548455006504028 0.3252574989159953 {M(Oxidation (M))|F}{I|L}D{M(Oxidation (M))|F}DDNY 3.3281 - 522 + 1 1.992 76968.5 1.0 4352 3512 7859 DOHH2_400M_050219_2,7866 DOHH2_400M_050219_2,7866,FLDDGHTFNY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7867 43.5 782.0 178250.0 25 0 26170.0 -1 0 137 396.8016379805473 791.5887230278946 2 396.8013183474541 MULTI CID FTMS 0 0 0 7859 136383.03125 1.0 0 0.0 8 2 {I|L}{I|L}{I|L} 3 -1 32.677 0.0 0.0 4.1281 0.0 0.0 0.0 449.31281458072505 449.31281458072505 14.863671462829547 0.0 0.0 0.0 0 1.0994850021680094 0.0 0.0 0.0 {I|L}{I|L}{I|L} 4.1281 - 46 + 1 1.992 110667.4 1.0 4353 3512 7859 DOHH2_400M_050219_2,7867 DOHH2_400M_050219_2,7867, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7868 43.505 244.0 112520.0 25 0 7485.0 + 7955 ELSRVRDL 8 62 494.2827311426652 986.5509093521304 2 494.2830688357353 MULTI CID FTMS 0 0 0 7859 133900.828125 1.0 0 0.0 9 Unmodified _ELSRVRDL_ REV__ENSG00000111057|ENST00000388835|KRT18;REV__ENST00000396959.2_1_3:12829511-12830132:-|nuORF;REV__ENST00000402024.2_1_6:116779363-116779789:-|nuORF;REV__ENST00000411618.1_1_9:30800375-30800732:-|nuORF;REV__ENST00000453838.2_1_1:182929095-182929497:-|nuORF;REV__ENST00000506277.1_1_5:36885388-36885895:+|nuORF;REV__ENST00000510337.1_1_5:122971848-122972142:+|nuORF;REV__ENST00000549078.5_1_12:53342924-53344195:+|nuORF;REV__ENST00000555540.1_1_14:35981656-35982271:-|nuORF 4.75600775471527 0.7954636275367004 2 {I|L} 1 -1 13.495 0.0 0.0 1.3679 0.0 0.0 855.455997708379 0.0 855.455997708379 0.0 11.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3679 + + 7 + 1 1.992 28166.5 1.0 4354 3512 7859 DOHH2_400M_050219_2,7868 DOHH2_400M_050219_2,7868,ELSRVRDL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7869 43.519 800.0 156410.0 25 0 25789.0 + + 42627 ISELLTSDDMKNAY 14 121 800.3875934963556 799.3803170297556 1 800.3830444216728 MULTI CID FTMS 0 0 0 7859 131283.203125 0.7191044518339416 -3 0.2238044738769531 10 Unmodified _VTTQSHGA_ nc|ENSG00000118246|Q9NYY8-2|FASTKD2;ENST00000471788.1_1_2:207651391-207655428:+|nuORF;ENSG00000118246|ENST00000402774|FASTKD2;ENST00000487777.5_1_2:207631381-207653673:+|nuORF 20.871210003555333 0.6025813472596342 2 {[TV]|[{I|L}S]}E{I|L}{I|L} 5 -1 36.357 0.0 0.0 4.5481 0.0 0.0 0.0 241.03043844993056 241.03043844993056 17.947858309300738 0.0 0.0 0.0 0 0.0 1.0 1.555462187404089 0.0 {[TV]|[{I|L}S]}E{I|L}{I|L} 4.5481 - 368 1 1.992 90211.6 0.6200000047683716 4355 3512 7859 DOHH2_400M_050219_2,7869 DOHH2_400M_050219_2,7869,VTTQSHGA False False ISELLTSDDMKNAY 43.518661 800.383044421673 894471.4375 7859.0 nc|ENSG00000118246|Q9NYY8-2|FASTKD2;;ENST00000471788.1_1_2:207651391-207655428:+|nuORF;;ENSG00000118246|ENST00000402774|FASTKD2;;ENST00000487777.5_1_2:207631381-207653673:+|nuORF 8.439679145812988 2.0 False 14.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7870 43.523 161.0 359110.0 25 0 32753.0 + 8602 EVAPTAHTL 9 94 469.7516072892384 937.4886616452768 2 469.7505981326103 MULTI CID FTMS 0 0 0 7859 118307.7890625 1.0 0 0.0 11 Unmodified _EVAPTAHTL_ REV__ENSG00000189184|ENST00000344876|PCDH18;REV__nc|ENSG00000189184|Q9HCL0-2|PCDH18 16.942295170755138 0.3780752226737986 2 {[QN]|[E{I|L}]|[KN]}G[RH]{I|L}[DV] 8 -1 + 23.134 0.0 0.0 2.4676 2.4676 48.002 0.0 0.0 0.0 1.953052385040664 5.57074336417444 1.953052385040664 0.0 0 0.0 1.0457574905606752 0.0 0.0 {[QN]|[E{I|L}]|[KN]}G[RH]{I|L}[DV];{[QN]|[E{I|L}]|[KN]}G[RH][VP]M;{[QN]|[E{I|L}]|[KN]}G{[VA]|[{I|L}G]}[YR]M;{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}][YR]M;{NN|[MP]|[D{I|L}]|[EV]}A[RH]{I|L}[DV];{NN|[MP]|[D{I|L}]|[EV]}A[RH][VP]M;{NN|[MP]|[D{I|L}]|[EV]}A{[VA]|[{I|L}G]}[YR]M;{[QN]|[E{I|L}]|[KN]}G{[VA]|[{I|L}G]}[HV][DV];{NN|[MP]|[D{I|L}]|[EV]}[HK]GQ[Q{I|L}];{[CP]|[EA]}[HQ]{I|L}[{I|L}P]M 2.4676;2.4676;2.439;2.0465;2.0132;2.0132;1.9847;1.4511;1.3198;1.2677 -;-;-;-;-;-;-;-;-;- 328 1 1.992 47688.0 1.0 4356 3512 7859 DOHH2_400M_050219_2,7870 DOHH2_400M_050219_2,7870,EVAPTAHTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7871 43.537 800.0 68926.0 25 0 8641.4 -1 0 86 959.1131914953642 2874.317745086292 3 959.7800781130792 MULTI CID FTMS 0 0 0 7859 99120.140625 0.0840541934445751 -16 1.069904327392578 12 2 [NP]P 3 -1 5.9421 0.0 0.0 0.20673 0.0 0.0 0.0 2563.140779104124 2563.140779104124 0.4575749056067497 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]P 0.20673 - 138 1 1.992 42237.6 0.4300000071525574 4357 3512 7859 DOHH2_400M_050219_2,7871 DOHH2_400M_050219_2,7871, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7872 43.551 800.0 221570.0 25 0 8285.7 -1 0 135 873.914100818394 1745.813648703588 2 874.4128906130791 MULTI CID FTMS 0 0 0 7859 139657.328125 0.2753425474515547 -3 0.2238044738769531 13 2 [MN]PN{I|L}NEAQ[RD]G{M(Oxidation (M))|F}{I|L}Q 15 -1 + 112.07 0.0 0.0 6.4194 6.4194 87.144 0.0 0.0 0.0 22.84639579475811 15.234615020224709 15.234615020224709 9.030899869919438 0 1.7856668758921828 1.5228787452803376 0.25 2.8505762035186217 [MN]PN{I|L}NEAQ[RD]G{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}GGEAQ[RD]G{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}NEAQ[RD]G{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NEA[AG][RD]G{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}MEAC(Carbamidomethyl (C))V{I|L}[DV]{I|L}Q;[MN]PN{I|L}NEAYYV[YK]Q;[MN]PGG{I|L}MEAC(Carbamidomethyl (C))V{I|L}[DV]{I|L}Q;[MN]PN{I|L}MEA[CG]V{I|L}[DV]{I|L}Q;[YV]GH{I|L}NEAQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[QN]|[E{I|L}]|[KN]}[DV]{I|L}NEAQ[RD]G{M(Oxidation (M))|F}{I|L}Q 6.4194;5.9021;5.9021;5.9021;5.2419;5.1971;4.7247;4.7247;4.0238;3.9441 -;-;-;-;-;-;-;-;-;- 4023 + 1 1.992 120679.5 0.5400000214576721 4358 3512 7859 DOHH2_400M_050219_2,7872 DOHH2_400M_050219_2,7872, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7873 43.559 447.0 139210.0 25 0 11006.0 36767 TEDLSRPLY 9 88 547.2796291330557 1092.5447053329112 2 547.2796508669853 MULTI CID FTMS 0 0 0 7859 105778.90625 0.0848767111499025 11 -0.5107002258300781 14 Unmodified _TEDLSRPLY_ ENSG00000257594|ENST00000529983|GALNT4 21.74664581756881 0.2544899275067181 2 {I|L}Y 2 7 19.693 0.0 0.0 1.8025 0.0 0.0 798.3855640486955 0.0 798.3855640486955 0.0 -0.2287874528033775 -0.2287874528033775 0.0 0 0.5 0.0 0.0 0.0 + {I|L}Y 1.8025 + + 161 + 1 1.992 50287.1 1.0 4359 3512 7859 DOHH2_400M_050219_2,7873 DOHH2_400M_050219_2,7873,TEDLSRPLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7874 43.574 800.0 104360.0 25 0 9295.5 + 16047 ITKSRWTL 8 131 502.7969868748186 0 502.7982665896416 PEAK CID FTMS 0 0 0 7859 87788.8125 1.0 0 0.0 15 Unmodified _ITKSRWTL_ REV__ENST00000276079.12_1_X:70504298-70511637:+|nuORF 13.50788311687929 0.5021269579892848 2 T 1 -1 3.7236 0.0 0.0 0.37104 0.0 0.0 771.4366728689747 128.07196985416252 899.5086427231372 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 T 0.37104 + + 25 + 1 1.992 67365.9 0.4199999868869781 4360 3512 7859 DOHH2_400M_050219_2,7874 DOHH2_400M_050219_2,7874,ITKSRWTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7876 43.581 129.0 300770.0 25 0 20632.0 + 26416 NTDPSIVMTY 10 81 570.7656946908764 1139.5168364485528 2 570.7659789919853 MULTI CID FTMS 0 0 0 7875 271749.96875 0.2105495557103631 2 -0.1236228942871093 1 Unmodified _NTDPSIVMTY_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF 39.21299971606389 0.1658776112144286 2 TY 2 8 24.464 0.0 0.0 2.1469 0.0 0.0 857.3950860380864 0.0 857.3950860380864 0.0 -4.688166459799376 -4.688166459799376 0.0 0 0.0 0.0 0.3494850021680094 0.0 + TY 2.1469 + + 141 + 1 1.992 35098.2 1.0 4361 3513 7875 DOHH2_400M_050219_2,7876 DOHH2_400M_050219_2,7876,NTDPSIVMTY False True NTDPSIVMTY 43.580521 570.765978991985 17956348.0 7875.0 ENST00000426186.1_3_2:87098444-87121919:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 6.512593428293864 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7877 43.584 200.0 320640.0 25 0 81017.0 + 89 AAGSHVIIL 9 82 440.7661076087003 879.5176622842006 2 440.7661926150322 MULTI CID FTMS 0 0 0 7875 307502.625 0.2447559739100318 -4 0.3548851013183594 2 Unmodified _AAGSHVIIL_ ENSG00000169188|ENST00000374987|APEX2 44.40701690623563 0.0526327925666318 2 AA[HT]AA{I|L}{I|L}{I|L} 9 4 + 58.311 0.0 0.0 6.6299 6.6299 85.793 0.0 0.0 0.0 6.478174818886373 16.478174818886373 6.478174818886373 6.478174818886373 0 0.5 1.5228787452803376 0.6989700043360187 0.0 AA[HT]AA{I|L}{I|L}{I|L};[HV]SGAA{I|L}{I|L}{I|L};AA[HT]{I|L}AA{I|L}{I|L};AA[HT]A{I|L}A{I|L}{I|L};[HV]SQA{I|L}{I|L}{I|L};[HV]SG{I|L}AA{I|L}{I|L};[HV]SGA{I|L}A{I|L}{I|L};AA[HT]{I|L}A{I|L}A{I|L};AA[HT]A{I|L}{I|L}A{I|L};AA[HT]{I|L}{I|L}AA{I|L} 6.6299;5.8933;5.8321;5.69;5.1568;5.0955;4.9535;4.524;4.3819;4.3819 -;-;-;-;-;-;-;-;-;- 311 1 1.992 51969.3 1.0 4362 3513 7875 DOHH2_400M_050219_2,7877 DOHH2_400M_050219_2,7877,AAGSHVIIL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7878 43.591 347.0 328500.0 25 0 44014.0 + 7034 EELDPESREYW 11 100 726.8173187651969 1451.6200845971937 2 726.8177368044853 MULTI CID FTMS 0 0 0 7875 273005.4375 0.7772940349743318 -1 0.1310806274414062 3 Unmodified _EELDPESREYW_ ENSG00000183617|ENST00000330133|MRPL54 94.90867108109512 0.0004917860609384 2 EE{I|L}DPES{[RE]|[WV]}YW 11 0 + 88.39 0.0 0.0 6.0891 6.0891 91.8 0.0 0.0 0.0 72.38615767805572 13.080923170097831 13.080923170097831 23.49896831032649 0 2.0114393726401687 1.6989700043360187 0.4247425010840047 0.3807196863200844 + + EE{I|L}DPES{[RE]|[WV]}YW;{[ET]|[MV]}H{[RE]|[WV]}SEPD{I|L}[HC];EE{I|L}D[Y{I|L}]{[QG]|[NA]}HY{[DA]|[EG]};EE{I|L}D[RH]WTY{[CT]|[{M(Oxidation (M))|F}G]};{NN|[MP]|[D{I|L}]|[EV]}[HC][{I|L}A]SEPD{I|L}[HC];{[ET]|[MV]}HWWEPD{I|L}[HC];EE{I|L}D[RH]WD{I|L}[HC];EE{I|L}D[Y{I|L}]{[QG]|[NA]}H{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT};{[ET]|[MV]}H{[RE]|[WV]}SEPTY{[CT]|[{M(Oxidation (M))|F}G]};EE{I|L}D[RH]{[DA]|[EG]}TY{[CT]|[{M(Oxidation (M))|F}G]} 6.0891;4.4702;4.2295;4.0233;3.9184;3.7525;3.7491;3.5055;3.487;3.3944 +;-;-;-;-;-;-;-;-;- + 722 + 1 1.992 86495.7 1.0 4363 3513 7875 DOHH2_400M_050219_2,7878 DOHH2_400M_050219_2,7878,EELDPESREYW True True EELDPESREYW 43.59063 726.817736804485 6051574.5 7875.0 ENSG00000183617|ENST00000330133|MRPL54 10.41859531402588 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7879 43.595 255.0 201200.0 25 0 18319.0 + + 6546 AEIGEGAYGKVF 12 80 620.814022022177 1239.613491111154 2 620.8140746951103 MULTI CID FTMS 0 0 0 7875 174676.3125 1.0 0 0.0 4 Unmodified _EALIWYDALF_ ENSG00000105810|ENST00000424848|CDK6 27.628801355627647 0.3479284626772844 2 {[CP]|[EA]}{I|L}GEQYGKV{M(Oxidation (M))|F} 11 -1 + 61.011 0.0 0.0 4.9217 4.9217 74.062 0.0 0.0 0.0 20.21076683145925 12.685016939859716 12.685016939859716 1.804560644581308 0 1.1861818737241734 0.0 0.0 0.0 {[CP]|[EA]}{I|L}GEQYGKV{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}WQYGKV{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}GE[AG]YGKV{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}W[AG]YGKV{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}GEQY[RK]{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}WQY[RK]{M(Oxidation (M))|F};{[CP]|[EA]}K[NG]QYGKV{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}GE[AG]Y[RK]{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}W[AG]Y[RK]{M(Oxidation (M))|F};{[CP]|[EA]}K[NG][AG]YGKV{M(Oxidation (M))|F} 4.9217;4.7762;4.1853;4.0369;3.6072;3.4651;3.4056;2.8679;2.7223;2.6692 -;-;-;-;-;-;-;-;-;- 1544 + 1 1.992 44913.5 1.0 4364 3513 7875 DOHH2_400M_050219_2,7879 DOHH2_400M_050219_2,7879,EALIWYDALF False False AEIGEGAYGKVF 43.595377 620.8152 1238634.0 7875.0 ENSG00000105810|ENST00000424848|CDK6 7.1668938000996905 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7880 43.603 404.0 170050.0 25 0 21442.0 + 40438 VIKHDSTR 8 100 478.26899917837926 954.5234454235584 2 478.2693359255791 MULTI CID FTMS 0 0 0 7875 170502.6875 0.6282455001013283 1 -0.0956764221191406 5 Unmodified _VIKHDSTR_ REV__ENSG00000198598|ENST00000360564|MMP17;REV__nc|ENSG00000198598|Q9ULZ9-2|MMP17 4.75600775471527 0.7954636275367004 2 {M(Oxidation (M))|F} 1 -1 9.464 0.0 0.0 0.99148 0.0 0.0 789.442938076682 0.0 789.442938076682 0.0 9.463950151760656 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.99148 - 5 + 1 1.992 59996.9 1.0 4365 3513 7875 DOHH2_400M_050219_2,7880 DOHH2_400M_050219_2,7880,VIKHDSTR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7881 43.607 241.0 274900.0 25 0 20534.0 + 25491 NELNIIHKF 9 116 376.5449151017983 1126.612915905595 3 376.5448791384697 MULTI CID FTMS 0 0 0 7875 164709.953125 0.8683524081220576 -1 0.1310806274414062 6 Unmodified _NELNIIHKF_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 13.042465956692816 0.4836390050082244 2 N{I|L}{I|L}HK{M(Oxidation (M))|F} 6 3 28.849 0.0 0.0 2.5607 0.0 0.0 356.1718891495387 0.0 356.1718891495387 0.0 6.402150411921781 0.0 0.0 0 0.0 0.0 0.0 0.0 + N{I|L}{I|L}HK{M(Oxidation (M))|F} 2.5607 + + 164 + 1 1.992 56722.9 1.0 4366 3513 7875 DOHH2_400M_050219_2,7881 DOHH2_400M_050219_2,7881,NELNIIHKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7882 43.617 553.0 163020.0 25 0 15691.0 + 25484 NELGVGGTSQW 11 116 574.2722198284888 1146.5298867237775 2 574.2721435427666 MULTI CID FTMS 0 0 0 7875 158427.28125 1.0 0 0.0 7 Unmodified _NELGVGGTSQW_ ENSG00000101310|ENST00000650089|SEC23B 53.40400417844725 0.0987786977674846 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GV[PG]W[{M(Oxidation (M))|F}E] 10 5 + 35.142 0.0 0.0 3.065 3.065 73.519 0.0 0.0 0.0 13.252574989159957 0.7918124604762511 0.7918124604762511 6.53212513775344 0 0.0 0.0 0.6139829889124311 0.535666875892183 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GV[PG]W[{M(Oxidation (M))|F}E];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}G[RP]W[{M(Oxidation (M))|F}E];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}R[PG]W[{M(Oxidation (M))|F}E];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GV[PG]{[DA]|[EG]}[{M(Oxidation (M))|F}E];{[QN]|[E{I|L}]|[KN]}NGV[PG]W[{M(Oxidation (M))|F}E];{[QD]|[EN]|[WG]|[KD]|[RS]}G{I|L}V[PG]W[{M(Oxidation (M))|F}E];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}G[RP]{[DA]|[EG]}[{M(Oxidation (M))|F}E];{[QS]|[NT]}[TP]V[PG]W[{M(Oxidation (M))|F}E];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}R[PG]{[DA]|[EG]}[{M(Oxidation (M))|F}E];{[QN]|[E{I|L}]|[KN]}NG[RP]W[{M(Oxidation (M))|F}E] 3.065;2.4953;2.2673;2.2657;1.9092;1.8953;1.6922;1.5282;1.4642;1.3394 -;-;-;-;-;-;-;-;-;- 802 1 1.992 77684.6 1.0 4367 3513 7875 DOHH2_400M_050219_2,7882 DOHH2_400M_050219_2,7882,NELGVGGTSQW True True NELGVGGTSQW 43.616809 574.272143542767 1207744.25 7875.0 ENSG00000101310|ENST00000650089|SEC23B 6.0193400382995605 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7883 43.622 284.0 190560.0 25 0 29366.0 + 13146 HFKSTIGPI 9 91 500.2829245958238 998.5512962584476 2 500.2831603884697 MULTI CID FTMS 0 0 0 7875 155888.703125 0.4068483572617108 5 -0.2497634887695312 8 Unmodified _HFKSTIGPI_ REV__ENSG00000180773|ENST00000326402|SLC36A4;REV__ENST00000526735.1_1_11:92887247-92899179:-|nuORF;REV__ENST00000527503.1_1_11:92881705-92887463:-|nuORF;REV__nc|ENSG00000180773|Q6YBV0-2|SLC36A4 7.289230182591677 0.6602208344931196 2 {I|L} 1 -1 9.6777 0.0 0.0 0.96918 0.0 0.0 867.4561557328601 0.0 867.4561557328601 0.0 9.193159988825128 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.96918 + + 5 + 1 1.992 47481.3 1.0 4368 3513 7875 DOHH2_400M_050219_2,7883 DOHH2_400M_050219_2,7883,HFKSTIGPI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7884 43.636 797.0 163950.0 25 0 6436.9 + 25492 NELNIIHKF 9 158 564.3143314613143 1126.6141099894285 2 564.3146240115166 MULTI CID FTMS 0 0 0 7875 114950.03125 1.0 0 0.0 9 Unmodified _NELNIIHKF_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 72.96794272382148 0.0199516581995792 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}N{I|L}{I|L}HK{M(Oxidation (M))|F} 9 0 {[QD]|[EN]|[WG]|[KD]|[RS]} + + 53.435 9.5906 3.9454 4.743 4.743 54.456 0.0 0.0 0.0 0.0 30.124121236461537 0.0 0.0 0 1.5356668758921828 0.0 0.0 0.5796896906561032 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}N{I|L}{I|L}HK{M(Oxidation (M))|F} 4.743 + + 1305 + 1 1.992 99261.6 1.0 4369 3513 7875 DOHH2_400M_050219_2,7884 DOHH2_400M_050219_2,7884,NELNIIHKF True True NELNIIHKF 43.635811 564.314624011517 2113398.1875 7875.0 ENST00000466404.5_1_19:54621832-54631576:+|nuORF;;nc|ENSG00000105618|Q8WWY3-3|PRPF31;;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;;nc|ENSG00000105618|Q8WWY3-2|PRPF31;;ENSG00000105618|ENST00000321030|PRPF31;;nc|ENSG00000105618|Q8WWY3-4|PRPF31 6.438682715098064 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7885 43.65 800.0 292320.0 25 0 12090.0 -1 MYFWKRFCFWK 11 127 857.9008790951956 1713.787205257191 2 858.4004394412041 MULTI CID FTMS 0 0 0 7875 105986.4921875 0.1259065255809181 -4 0.3548851013183594 10 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 2 [MN]PN{I|L}NAT[WY]AN{I|L}S 14 -1 109.02 0.0 0.0 6.3614 0.0 0.0 0.0 121.04129968814686 121.04129968814686 62.93975546198382 0.0 0.0 0.0 0 1.5189301784845295 1.5228787452803376 0.3054621874040891 2.7302046884880937 [MN]PN{I|L}NAT[WY]AN{I|L}S 6.3614 - 28577 + 1 1.992 154625.8 0.550000011920929 4370 3513 7875 DOHH2_400M_050219_2,7885 DOHH2_400M_050219_2,7885,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7886 43.665 800.0 201060.0 25 0 24440.0 + 39767 VEMYDPTRNEW 11 126 720.316538412346 1438.6185238914918 2 720.3165771365166 MULTI CID FTMS 0 0 0 7875 94533.578125 0.4461648613044034 -2 0.2150726318359375 11 Unmodified _VEMYDPTRNEW_ ENSG00000116679|ENST00000367498|IVNS1ABP;ENST00000459929.5_1_1:185267169-185275646:-|nuORF;ENST00000480769.5_1_1:185267169-185274781:-|nuORF 72.58957779350692 0.0248999445157541 2 VEMYDPT 7 4 86.05 0.0 0.0 5.9814 0.0 0.0 0.0 600.2525118463499 600.2525118463499 65.59253889761443 0.0 0.0 0.0 0 1.3807196863200843 1.6989700043360187 1.079689690656103 0.0 + VEMYDPT 5.9814 + + 639 + 1 1.992 114450.8 0.550000011920929 4371 3513 7875 DOHH2_400M_050219_2,7886 DOHH2_400M_050219_2,7886,VEMYDPTRNEW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7887 43.67 249.0 268480.0 25 0 23474.0 + -1 TEQDLKEYF 9 100 586.2745855532459 1170.5346181732916 2 586.7770873904228 MULTI CID FTMS 0 0 0 7875 92265.6015625 0.1106053596767333 -11 0.9424285888671876 12 Carbamidomethyl (C) _TVVANEIC(Carbamidomethyl (C))EH_ ENSG00000120948|ENST00000240185|TARDBP 18.1463463914782 0.5430639438673815 2 [AG]D{I|L}KE{[CP]|[EA]}Q[NP] 11 -1 + 31.428 0.0 0.0 2.6849 2.6849 66.948 0.0 0.0 0.0 1.658658717118726 0.3361976019096993 0.3361976019096993 1.658658717118726 0 0.0 1.3979400086720375 1.0189301784845295 1.3807196863200843 [AG]D{I|L}KE{[CP]|[EA]}Q[NP];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KEY{M(Oxidation (M))|F}[QT];{[DS]|[MA]|[CV]|TT}[PG]KEY{M(Oxidation (M))|F}[QT];[AG]D{I|L}[WR]DQ[NP];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KE{[CP]|[EA]}Q[NP];{[ET]|[MV]}[RV]QY{M(Oxidation (M))|F}[QT];{[DS]|[MA]|[CV]|TT}[PG][QT]{I|L}DQ[NP];[QT]Q{[CP]|[EA]}EK[PG][PS];[AG]D{I|L}KE{[CP]|[EA]}[AG][NP];{[DS]|[MA]|[CV]|TT}[PG]K[DV]DQ[NP] 2.6849;2.5432;2.4108;2.149;2.0757;2.0186;1.9729;1.9471;1.9051;1.8895 -;-;-;-;-;-;-;-;-;- 667 1 1.992 54972.4 1.0 4372 3513 7875 DOHH2_400M_050219_2,7887 DOHH2_400M_050219_2,7887,TVVANEICEH False False TEQDLKEYF 43.669592 586.777087390423 5449259.0 7875.0 ENSG00000120948|ENST00000240185|TARDBP 6.648634910583496 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7889 43.676 96.0 481620.0 25 0 98292.0 + 23918 LVNQKTKSQ 9 67 523.3030520939583 1044.5915512547165 2 523.3038818240166 MULTI CID FTMS 0 0 0 7888 427141.03125 0.44163362508664 5 -0.1800155639648437 1 Unmodified _LVNQKTKSQ_ REV__ENSG00000127980|ENST00000248633|PEX1;REV__ENST00000484913.5_1_7:92116773-92148321:-|nuORF 1.6526216038709556 0.8569919814334629 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.992 43999.5 1.0 4373 3514 7888 DOHH2_400M_050219_2,7889 DOHH2_400M_050219_2,7889,LVNQKTKSQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7890 43.679 162.0 301400.0 25 0 39622.0 + 1581 ALLERGYSL 9 78 511.2875221670736 1020.5604914009472 2 511.2880126833916 MULTI CID FTMS 0 0 0 7888 316026.5625 0.3781712558957149 2 -0.0495338439941406 2 Unmodified _ALLERGYSL_ ENSG00000182199|ENST00000328923|SHMT2;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 49.55428908609986 0.0413471690215031 2 [{I|L}A]{I|L}[DV]QYS 8 4 42.669 0.0 0.0 4.1809 0.0 0.0 0.0 128.06974368049728 128.06974368049728 28.06479076621045 0.0 0.0 0.0 0 1.805462187404089 2.0 0.0 0.0 [{I|L}A]{I|L}[DV]QYS 4.1809 - 76 1 1.992 43914.1 1.0 4374 3514 7888 DOHH2_400M_050219_2,7890 DOHH2_400M_050219_2,7890,ALLERGYSL True True ALLERGYSL 43.678769 511.288012683392 10909173.0 7888.0 ENST00000553837.5_1_12:57625333-57628141:+|nuORF;;ENSG00000182199|ENST00000328923|SHMT2;;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;;nc|ENSG00000182199|P34897-2|SHMT2;;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;;nc|ENSG00000182199|P34897-3|SHMT2;;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 5.776463985443115 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7891 43.682 138.0 367800.0 25 0 43464.0 12914 GYMLRLGAP 9 72 489.2652999549621 976.5160469767244 2 489.2657348513603 MULTI CID FTMS 0 0 0 7888 360533.4375 0.6244248041655057 2 -0.0495338439941406 3 Unmodified _GYMLRLGAP_ ENSG00000133048|ENST00000255409|CHI3L1;ENST00000472064.1_1_1:203149576-203151929:-|nuORF 18.13498045792455 0.3457906370836843 2 YGM 3 7 48.984 0.0 0.0 5.0162 0.0 0.0 0.0 622.3681198661451 622.3681198661451 35.48963451112506 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 YGM 5.0162 - 31 + 1 1.992 44787.1 1.0 4375 3514 7888 DOHH2_400M_050219_2,7891 DOHH2_400M_050219_2,7891,GYMLRLGAP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7892 43.684 143.0 425190.0 25 0 74692.0 40843 VLNQLLSFTV 10 75 567.3294638107494 1132.6443746882987 2 567.3300048708916 MULTI CID FTMS 0 0 0 7888 307957.15625 0.7052337037828214 -4 0.387115478515625 4 Unmodified _VLNQLLSFTV_ ENSG00000130943|ENST00000253255|PKDREJ 1.4819007175156935 0.719781833666733 2 R 1 10 4.6041 0.0 0.0 0.40649 0.0 0.0 610.46445633068 363.04844080142817 973.5128971321084 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.40649 - 2 + 1 1.992 50853.7 1.0 4376 3514 7888 DOHH2_400M_050219_2,7892 DOHH2_400M_050219_2,7892,VLNQLLSFTV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7893 43.688 201.0 296590.0 25 0 19214.0 + 24347 MELPHGGEGW 10 94 556.7457735098628 1111.4769940865256 2 556.7454711794853 MULTI CID FTMS 0 0 0 7888 262278.1875 0.4456715142218292 2 -0.0495338439941406 5 Unmodified _MELPHGGEGW_ ENSG00000127564|ENST00000262300|PKMYT1;ENST00000575981.1_1_16:3022956-3024767:-|nuORF;nc|ENSG00000127564|Q99640-2|PKMYT1;nc|ENSG00000127564|Q99640-3|PKMYT1;nc|ENSG00000127564|Q99640-4|PKMYT1 74.92900055777586 0.0187778523875693 2 ME{I|L}PHPD 7 5 77.784 0.0 0.0 6.9983 0.0 0.0 0.0 289.08323084049067 289.08323084049067 27.63628443975044 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 1.6549471895720984 0.0 ME{I|L}PHPD 6.9983 - 1504 + 1 1.992 52688.3 1.0 4377 3514 7888 DOHH2_400M_050219_2,7893 DOHH2_400M_050219_2,7893,MELPHGGEGW True True MELPHGGEGW 43.688291 556.745471179485 10335892.0 7888.0 nc|ENSG00000127564|Q99640-4|PKMYT1;;nc|ENSG00000127564|Q99640-2|PKMYT1;;ENST00000575981.1_1_16:3022956-3024767:-|nuORF;;ENSG00000127564|ENST00000262300|PKMYT1;;nc|ENSG00000127564|Q99640-3|PKMYT1 7.653820355733235 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7894 43.693 273.0 200900.0 25 0 16608.0 + 6998 EEIPVSSHYF 10 78 604.2848711836715 1206.555189434143 2 604.2845947146416 MULTI CID FTMS 0 0 0 7888 162419.546875 0.4054099980413678 2 -0.0495338439941406 6 Unmodified _EEIPVSSHYF_ ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF;ENST00000560821.1_1_15:91352032-91358506:+|nuORF 43.85829265575387 0.1168243637355526 2 EE{I|L}[HM]VP 7 6 38.473 0.0 0.0 3.1886 0.0 0.0 0.0 368.1454732623254 368.1454732623254 15.452490459521968 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.1237125054200234 0.0 EE{I|L}[HM]VP 3.1886 - 252 1 1.992 45234.0 1.0 4378 3514 7888 DOHH2_400M_050219_2,7894 DOHH2_400M_050219_2,7894,EEIPVSSHYF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7895 43.698 222.0 202220.0 25 0 24025.0 + 38411 TRGAPIVL 8 73 413.7611871369167 825.5078213406333 2 413.7607604861259 MULTI CID FTMS 0 0 0 7888 143010.15625 0.7454618387214348 1 -0.0279464721679687 7 Unmodified _TRGAPIVL_ REV__ENSG00000068781|ENST00000394754|STON1-GTF2A1L;REV__ENSG00000242441|ENST00000403751|GTF2A1L;REV__nc|ENSG00000242441|Q9UNN4-2|GTF2A1L;REV__nc|ENSG00000243244|Q9Y6Q2-2|STON1 7.910154910731844 0.7763180056447161 2 V{I|L} 2 -1 19.949 0.0 0.0 2.4165 0.0 0.0 595.3446418746162 0.0 595.3446418746162 0.0 9.490925311194188 0.0 0.0 0 0.5 0.0 0.0 0.0 V{I|L} 2.4165 + + 18 + 1 1.992 41795.9 1.0 4379 3514 7888 DOHH2_400M_050219_2,7895 DOHH2_400M_050219_2,7895,TRGAPIVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7897 43.705 283.0 242370.0 25 0 40877.0 40858 VLPLGAEL 8 87 406.2483238056012 810.4820946780025 2 406.2485229372978 MULTI CID FTMS 0 0 0 7896 224925.34375 0.1076223242116066 5 -0.1818008422851562 1 Unmodified _VLPLGAEL_ ENST00000485984.1_1_1:3389348-3394597:+|nuORF 2.302733041254933 0.8103549651115762 2 [YE]{I|L} 3 6 22.932 0.0 0.0 2.8294 0.0 0.0 0.0 402.2745806001306 402.2745806001306 20.94212497064703 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YE]{I|L} 2.8294 - 28 1 1.992 64345.4 1.0 4380 3515 7896 DOHH2_400M_050219_2,7897 DOHH2_400M_050219_2,7897,VLPLGAEL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7898 43.719 800.0 126540.0 25 0 5808.0 -1 0 109 901.4455649675524 1800.8765770019045 2 901.4464599490166 MULTI CID FTMS 0 0 0 7896 70060.484375 0.3547238327478059 3 -0.1261405944824218 2 2 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[RH]{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]} 15 -1 + 99.171 0.0 0.0 5.5068 5.5068 83.148 0.0 0.0 0.0 7.997264672786599 7.997264672786599 7.997264672786599 7.997264672786599 0 1.555462187404089 2.0 0.3807196863200844 2.1549471895720984 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[RH]{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PNA{M(Oxidation (M))|F}[RH]DY{I|L}K[WQ];{[QV]|[N{I|L}]|[RA]|[KV]}PNA{M(Oxidation (M))|F}[RH]DY{I|L}Q[WK];{[QV]|[N{I|L}]|[RA]|[KV]}PNA{M(Oxidation (M))|F}[RH]DY{I|L}QV{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGAD[RH]{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NAD[RH]{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW[RH]{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NA[YG]{[MG]|[TS]}{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PNA{M(Oxidation (M))|F}[RH]DY{I|L}[AG][WK] 5.5068;5.0627;5.0627;5.0461;5.0053;5.0053;4.9239;4.6441;4.5641;4.5602 -;-;-;-;-;-;-;-;-;- 3614 + 1 1.992 69040.9 0.6100000143051147 4381 3515 7896 DOHH2_400M_050219_2,7898 DOHH2_400M_050219_2,7898, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7900 43.729 408.0 190090.0 25 0 36001.0 37800 TLSKTQRKT 9 101 531.8167073282751 1061.6188617233502 2 531.8173095583916 MULTI CID FTMS 0 0 0 7899 127494.9375 0.3331453056247775 7 -0.2344093322753906 1 Unmodified _TLSKTQRKT_ ENSG00000107937|ENST00000360803|GTPBP4 4.3292370932331545 0.7635526921153418 2 {M(Oxidation (M))|F} 1 9 10.278 0.0 0.0 0.96811 0.0 0.0 896.539407232919 0.0 896.539407232919 0.0 7.803336530848686 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.96811 - 14 + 1 1.992 65296.0 1.0 4382 3516 7899 DOHH2_400M_050219_2,7900 DOHH2_400M_050219_2,7900,TLSKTQRKT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7901 43.734 274.0 315730.0 25 0 31486.0 + 589 AEITDKLGL 9 107 480.2743908857532 958.5342288383064 2 480.2745544314384 MULTI CID FTMS 0 0 0 7899 167033.71875 0.5170582692356618 -2 0.0495338439941406 2 Unmodified _AEITDKLGL_ ENSG00000134287|ENST00000256682|ARF3;ENSG00000143761|ENST00000272102|ARF1;ENST00000444561.2_1_17:43710417-43713807:+|nuORF;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3 34.40172386719151 0.1061884637610825 2 [TA]AT{I|L}{I|L}G 7 5 40.979 0.0 0.0 4.2752 0.0 0.0 0.0 328.152262857508 328.152262857508 5.136284439750433 0.0 0.0 0.0 0 0.0 0.0 1.677825934852436 0.0 [TA]AT{I|L}{I|L}G 4.2752 - 542 1 1.992 69869.8 1.0 4383 3516 7899 DOHH2_400M_050219_2,7901 DOHH2_400M_050219_2,7901,AEITDKLGL True True AEITDKLGL 43.734031 480.274554431438 3877701.25 7899.0 ENST00000444561.2_1_17:43710417-43713807:+|nuORF;;ENSG00000143761|ENST00000272102|ARF1;;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;;nc|ENSG00000134287|P61204-2|ARF3;;ENSG00000134287|ENST00000256682|ARF3 3.71013085047404 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7902 43.74 343.0 208980.0 25 0 27098.0 + + 44249 YLDIPNPRY 9 102 575.8427722231648 1149.6709915131296 2 575.8430053591728 MULTI CID FTMS 0 0 0 7899 134067.828125 0.7952254448683213 -2 0.0495338439941406 3 Unmodified _YLKGIKRSW_ nc|ENSG00000122966|O14578|CIT;ENSG00000122966|ENST00000392521|CIT;ENST00000545913.5_1_12:120126039-120222037:-|nuORF;nc|ENSG00000122966|O14578-3|CIT;ENST00000537607.5_1_12:120126039-120222037:-|nuORF 7.910154910731844 0.6385446671287552 2 [Y{I|L}]DM 4 -1 27.703 0.0 0.0 2.4096 0.0 0.0 0.0 624.4417794372108 624.4417794372108 10.915513912237028 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}]DM 2.4096 - 131 1 1.992 59255.6 1.0 4384 3516 7899 DOHH2_400M_050219_2,7902 DOHH2_400M_050219_2,7902,YLKGIKRSW False False YLDIPNPRY 43.740243 575.843005359173 1293436.0 7899.0 nc|ENSG00000122966|O14578|CIT;;ENSG00000122966|ENST00000392521|CIT;;ENST00000545913.5_1_12:120126039-120222037:-|nuORF;;nc|ENSG00000122966|O14578-3|CIT;;ENST00000537607.5_1_12:120126039-120222037:-|nuORF 5.984699885050456 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7903 43.751 616.0 283740.0 25 0 26346.0 + 14272 IEHGIITNW 9 142 541.7851096152443 1081.5556662972886 2 541.7855102419853 MULTI CID FTMS 0 0 0 7899 135234.15625 0.0375710208478307 -7 0.5000953674316406 4 Unmodified _IEHGIITNW_ ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF 46.020951573049366 0.0490941689151868 2 {I|L}G{I|L}VTNW 7 3 59.431 0.0 0.0 5.4949 0.0 0.0 280.11726576972814 0.0 280.11726576972814 0.0 36.73516269895728 0.0 0.0 0 0.7742275032520141 0.0 0.8252574989159953 0.3494850021680094 {I|L}G{I|L}VTNW 5.4949 - 2040 1 1.992 136992.2 1.0 4385 3516 7899 DOHH2_400M_050219_2,7903 DOHH2_400M_050219_2,7903,IEHGIITNW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7904 43.755 221.0 271670.0 25 0 28632.0 + 36838 TELGRPDAEYW 11 67 668.8121366735033 1335.6097204138066 2 668.8118163943291 MULTI CID FTMS 0 0 0 7899 120767.6796875 0.638098294690888 2 -0.10455322265625 5 Unmodified _TELGRPDAEYW_ ENSG00000196126|ENST00000360004|HLA-DRB1;ENSG00000198502|ENST00000374975|HLA-DRB5 27.088373467376528 0.4561593585727911 2 AEYW 4 7 38.175 0.0 0.0 2.8583 0.0 0.0 768.3753529279312 0.0 768.3753529279312 0.0 23.910553545553768 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + AEYW 2.8583 + + 38 1 1.992 51905.6 1.0 4386 3516 7899 DOHH2_400M_050219_2,7904 DOHH2_400M_050219_2,7904,TELGRPDAEYW False True TELGRPDAEYW 43.755191 668.811816394329 1650649.75 7899.0 ENSG00000196126|ENST00000360004|HLA-DRB1;;ENSG00000198502|ENST00000374975|HLA-DRB5 8.342919508616129 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7905 43.764 507.0 145560.0 25 0 10812.0 + 6905 EEFEKLYASY 10 114 639.7975254550201 1277.5804979768402 2 639.7977783083916 MULTI CID FTMS 0 0 0 7899 110043.2265625 0.3413680933802349 3 -0.1304817199707031 6 Unmodified _EEFEKLYASY_ ENSG00000167325|ENST00000300738|RRM1 32.78568957990786 0.2337485590374503 2 [{M(Oxidation (M))|F}E]K{I|L}EEPHSY 10 6 [{M(Oxidation (M))|F}E]K{I|L}EEPH + + 23.856 8.153 0.80765 1.8673 1.8673 47.325 0.0 0.0 0.0 0.0 7.658467447160984 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 [{M(Oxidation (M))|F}E]K{I|L}EEPHSY 1.8673 - 422 + 1 1.992 61391.0 1.0 4387 3516 7899 DOHH2_400M_050219_2,7905 DOHH2_400M_050219_2,7905,EEFEKLYASY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7906 43.777 744.0 342610.0 25 0 23759.0 + 29437 QLFVRAQEL 9 161 552.3140530657133 1102.6135531982266 2 552.3144409060478 MULTI CID FTMS 0 0 0 7899 96753.0390625 0.0829964411836421 -6 0.4366493225097656 7 Unmodified _QLFVRAQEL_ ENSG00000149806|ENST00000529639|FAU;ENST00000531357.1_1_11:64889042-64889375:-|nuORF 155.02607137521346 0.0088416533300911 2 [Q{I|L}]{M(Oxidation (M))|F}ARVQE{I|L} 9 2 + 77.185 0.0 0.0 7.0002 7.0002 83.356 0.0 0.0 0.0 12.253606678833464 12.967037512142369 12.253606678833464 3.2838616227078177 0 1.297106248532352 1.6989700043360187 0.5 2.368415180652539 [Q{I|L}]{M(Oxidation (M))|F}ARVQE{I|L};[Q{I|L}]{M(Oxidation (M))|F}ARVEQ{I|L};[Q{I|L}]{M(Oxidation (M))|F}ARD{I|L}Q{I|L};[Q{I|L}]{M(Oxidation (M))|F}VRAQE{I|L};[Q{I|L}]{M(Oxidation (M))|F}ARV[AG]E{I|L};[Q{I|L}]{M(Oxidation (M))|F}VRAEQ{I|L};[AG]{I|L}{M(Oxidation (M))|F}ARVQE{I|L};[Q{I|L}]{M(Oxidation (M))|F}ARVE[AG]{I|L};Q{I|L}{M(Oxidation (M))|F}V[H{I|L}]S{M(Oxidation (M))|F}{I|L};[Q{I|L}]{M(Oxidation (M))|F}ARD{I|L}[AG]{I|L} 7.0002;6.7023;6.5866;6.4193;6.165;6.1215;5.8888;5.8672;5.8241;5.7514 -;-;-;+;-;-;-;-;-;- + 8206 1 1.992 195844.3 1.0 4388 3516 7899 DOHH2_400M_050219_2,7906 DOHH2_400M_050219_2,7906,QLFVRAQEL True True QLFVRAQEL 43.777037 552.314440906048 13810534.0 7899.0 ENST00000531357.1_1_11:64889042-64889375:-|nuORF;;ENSG00000149806|ENST00000529639|FAU 6.171145757039388 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7907 43.791 800.0 60643.0 25 0 3585.6 -1 RCHRRRRRCCC 11 68 866.9070133939276 1731.7994738546552 2 867.4055663943291 MULTI CID FTMS 0 0 0 7899 91227.25 0.0116294285550021 26 -1.1802330017089844 8 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 2 [MN][{I|L}P]{I|L}DAD 8 -1 35.099 0.0 0.0 2.0267 0.0 0.0 0.0 859.4065685472627 859.4065685472627 7.395775165767873 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 [MN][{I|L}P]{I|L}DAD 2.0267 - 179 + 1 1.992 41293.8 0.550000011920929 4389 3516 7899 DOHH2_400M_050219_2,7907 DOHH2_400M_050219_2,7907,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7908 43.8 426.0 81589.0 25 0 5573.7 + 35669 SVDPHGFISY 10 67 561.2666909069633 1120.5188288807265 2 561.2673217654228 MULTI CID FTMS 0 0 0 7899 83786.9765625 0.0053575921567557 22 -0.8291511535644531 9 Unmodified _SVDPHGFISY_ ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50;nc|ENSG00000105197|Q3ZCQ8-3|TIMM50 18.1463463914782 0.5430639438673815 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}SY 9 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L} + + 22.959 -6.2864 -0.73749 2.0489 2.0489 47.507 0.0 0.0 0.0 0.0 11.989700043360187 0.0 0.0 0 0.5 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}SY 2.0489 - 57 + 1 1.992 34052.3 1.0 4390 3516 7899 DOHH2_400M_050219_2,7908 DOHH2_400M_050219_2,7908,SVDPHGFISY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7910 43.807 149.0 383750.0 25 0 17584.0 -1 0 68 873.914100818394 1745.813648703588 2 873.9153320193291 MULTI CID FTMS 0 0 0 7909 276606.6875 0.4756905089806232 1 -0.0240287780761718 1 2 [MN]PN{I|L}NEAQA[QP]N{I|L} 14 -1 91.68 0.0 0.0 5.2514 0.0 0.0 0.0 208.07306848697505 208.07306848697505 68.40874491738596 0.0 0.0 0.0 0 1.1549471895720984 1.6989700043360187 0.0 0.4247425010840047 [MN]PN{I|L}NEAQA[QP]N{I|L} 5.2514 - 624 + 1 1.992 43377.8 1.0 4391 3517 7909 DOHH2_400M_050219_2,7910 DOHH2_400M_050219_2,7910, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7911 43.817 624.0 129370.0 25 0 9968.6 + 29305 QIKEMVEL 8 112 495.2699246805389 988.5252964278778 2 495.2696716189384 MULTI CID FTMS 0 0 0 7909 82192.578125 0.5311476644678916 3 -0.0796890258789062 2 Unmodified _QIKEMVEL_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 30.22481116460888 0.4082965392918993 2 {NN|[MP]|[D{I|L}]|[EV]}M[RP]V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 8 6 + 15.072 0.0 0.0 1.5247 1.5247 68.846 0.0 0.0 0.0 0.4677437977763095 -2.2037746486127983 -2.2037746486127983 3.979400086720375 0 0.0 1.2218487496163564 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}M[RP]V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{NN|[MP]|[D{I|L}]|[EV]}[RP]MV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{NN|[MP]|[D{I|L}]|[EV]}M[RV]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[Q{I|L}][RP]{[ES]|[DT]|[{I|L}C]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 1.5247;1.1221;0.91563;0.23734 -;-;-;- 262 1 1.992 64748.3 1.0 4392 3517 7909 DOHH2_400M_050219_2,7911 DOHH2_400M_050219_2,7911,QIKEMVEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7912 43.824 348.0 371380.0 25 0 18593.0 + 25974 NLPPHIIRL 9 122 358.2250351249064 1071.653275974919 3 358.2254516482353 MULTI CID FTMS 0 0 0 7909 242554.65625 0.4297777862926464 7 -0.1865577697753906 3 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 12.872603262515298 0.4882369880199512 2 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}R{I|L}{I|L} 9 2 + 48.753 0.0 0.0 4.5493 4.5493 70.405 0.0 0.0 0.0 35.9887199536231 2.237610926422533 2.237610926422533 0.3778856088939974 0 0.2614393726401688 1.6989700043360187 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}R{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L}{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PP{I|L}HR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PP{I|L}H{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PPHR{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PHR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PH{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PPHR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PPH{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}R{I|L}{I|L} 4.5493;4.5141;4.1041;4.0688;3.9875;3.8232;3.7879;3.5423;3.507;2.7996 -;+;-;-;-;-;-;-;-;- + 156 + 1 1.992 111046.7 1.0 4393 3517 7909 DOHH2_400M_050219_2,7912 DOHH2_400M_050219_2,7912,NLPPHIIRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7914 43.835 483.0 304000.0 25 0 28003.0 + 9064 FEYEYSQRW 9 122 654.2877060648833 1306.5608591965663 2 654.2886230349541 MULTI CID FTMS 0 0 0 7913 154970.453125 0.7128875250079316 1 -0.0259284973144531 1 Unmodified _FEYEYSQRW_ ENSG00000116560|ENST00000357214|SFPQ;nc|ENSG00000116560|P23246-2|SFPQ 79.59630418116434 0.0176145593575188 2 {M(Oxidation (M))|F}EYEYSQ[WR] 9 0 + 89.901 0.0 0.0 6.8807 6.8807 90.219 0.0 0.0 0.0 77.25054710168186 10.642492736872596 10.642492736872596 9.208187539523747 0 1.25 0.0 0.7742275032520141 1.5044321917401078 + + {M(Oxidation (M))|F}EYEYSQ[WR];{M(Oxidation (M))|F}EYEYS[AG][WR];[YE]{M(Oxidation (M))|F}{I|L}EY[VS]EE;{M(Oxidation (M))|F}EYEG{M(Oxidation (M))|F}{[CA]|SS}[WR];[YE]{M(Oxidation (M))|F}{I|L}E[VS]YEE;[YE]{M(Oxidation (M))|F}E{I|L}Y[VS]EE;[YE]{M(Oxidation (M))|F}E{I|L}[VS]YEE;[YE]{M(Oxidation (M))|F}{I|L}T[DV]YEE;{M(Oxidation (M))|F}EYEGE[R{M(Oxidation (M))|F}][KC];{M(Oxidation (M))|F}EYEW[R{M(Oxidation (M))|F}][KC] 6.8807;6.176;5.2698;5.1967;5.0936;5.0804;4.9042;4.8447;4.6246;4.6061 +;-;-;-;-;-;-;-;-;- + 1322 + 1 1.992 108660.8 1.0 4394 3518 7913 DOHH2_400M_050219_2,7914 DOHH2_400M_050219_2,7914,FEYEYSQRW True True FEYEYSQRW 43.834795 654.2858 1413415.25 7913.0 ENSG00000116560|ENST00000357214|SFPQ;;nc|ENSG00000116560|P23246-2|SFPQ 5.810322046279907 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7915 43.837 90.0 597660.0 25 0 80253.0 + 41908 VQFIGRALW 9 94 545.3162561026879 1088.6179592721758 2 545.3146240115166 MULTI CID FTMS 0 0 0 7913 326798.59375 0.3097664715214808 -13 1.0450706481933594 2 Unmodified _VQFIGRALW_ REV__ENST00000395123.6_1_11:57193529-57194387:-|nuORF;REV__ENST00000395124.5_1_11:57193529-57194590:-|nuORF;REV__ENST00000526621.5_3_11:57193529-57194929:-|nuORF;REV__ENST00000529112.5_3_11:57193529-57194064:-|nuORF;REV__ENST00000532795.5_3_11:57193529-57194924:-|nuORF;REV__ENST00000533235.5_2_11:57193529-57194920:-|nuORF;REV__ENST00000533245.5_3_11:57193529-57194590:-|nuORF 4.3292370932331545 0.7635526921153418 2 W 1 -1 11.594 0.0 0.0 1.065 0.0 0.0 884.5275489711977 0.0 884.5275489711977 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.065 + + 17 + 1 1.992 47710.3 1.0 4395 3518 7913 DOHH2_400M_050219_2,7915 DOHH2_400M_050219_2,7915,VQFIGRALW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7916 43.85 738.0 219040.0 25 0 13764.0 + 1415 ALDGGFQMHY 10 153 569.752751486415 1137.49095003963 2 570.2543212771416 MULTI CID FTMS 0 0 0 7913 97324.1171875 0.7437801673102619 -5 0.2497634887695312 3 Unmodified _ALDGGFQMHY_ ENSG00000255302|ENST00000530028|EID1;nc|ENSG00000255302|Q9Y6B2-2|EID1 36.12702656103203 0.1984647928738587 2 [{I|L}A]NG[W{M(Oxidation (M))|F}]MH 8 4 35.996 0.0 0.0 3.1645 0.0 0.0 0.0 178.05127893619377 178.05127893619377 19.463701955118875 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 [{I|L}A]NG[W{M(Oxidation (M))|F}]MH 3.1645 - 1633 + 1 1.992 127241.3 1.0 4396 3518 7913 DOHH2_400M_050219_2,7916 DOHH2_400M_050219_2,7916,ALDGGFQMHY False True ALDGGFQMHY 43.849605 570.254321277142 1199728.875 7913.0 ENSG00000255302|ENST00000530028|EID1;;nc|ENSG00000255302|Q9Y6B2-2|EID1 6.0009870529174805 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7918 43.854 56.0 959460.0 25 0 249360.0 + 13865 HVISGAALL 9 64 440.7661076087003 879.5176622842006 2 440.7662536501884 MULTI CID FTMS 0 0 0 7917 957828.0 0.7623808901738578 2 -0.0336227416992187 1 Unmodified _HVISGAALL_ REV__ENSG00000198914|ENST00000361360|POU3F3 23.1484247019978 0.2366544122328345 2 AA[HT]AA{I|L}{I|L}{I|L} 9 -1 + 37.514 0.0 0.0 4.2653 4.2653 75.017 0.0 0.0 0.0 8.440899702813034 22.029478005380064 8.440899702813034 4.771212547196626 0 0.8182503180159344 1.5228787452803376 0.0 0.0 AA[HT]AA{I|L}{I|L}{I|L};AA[HT]{I|L}AA{I|L}{I|L};AA[HT]A{I|L}A{I|L}{I|L};[HV][SG]AA{I|L}{I|L}{I|L};[HV][SG]{I|L}AA{I|L}{I|L};[HV][SG]A{I|L}A{I|L}{I|L};[HV]{[QS]|[NT]}A{I|L}{I|L}{I|L};[HV]{I|L}[SG]AA{I|L}{I|L};[HV]{I|L}{[QS]|[NT]}A{I|L}{I|L};[HV]{[QS]|[NT]}{I|L}A{I|L}{I|L} 4.2653;3.7228;3.5808;2.5338;1.9913;1.8493;1.7972;1.4488;1.2548;1.1127 -;-;-;-;-;-;-;+;-;- + 98 1 1.992 48616.7 1.0 4397 3519 7917 DOHH2_400M_050219_2,7918 DOHH2_400M_050219_2,7918,HVISGAALL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7919 43.869 800.0 149250.0 25 0 10935.0 + 7035 EELDPESREYW 11 118 726.8173187651969 1451.6200845971937 2 727.3188354372978 MULTI CID FTMS 0 0 0 7917 108771.390625 0.3759907243613951 4 -0.1039276123046875 2 Unmodified _EELDPESREYW_ ENSG00000183617|ENST00000330133|MRPL54 35.61225514009592 0.279986979807413 2 EE{I|L}DPES{[RE]|[WV]}YW 11 0 + 60.934 0.0 0.0 4.1977 4.1977 73.801 0.0 0.0 0.0 40.400990676322905 1.249387366082999 1.249387366082999 3.735806628125928 0 0.5 1.6989700043360187 0.3494850021680094 0.0 + + EE{I|L}DPES{[RE]|[WV]}YW;EE{I|L}DPES[{I|L}A]D[TA]Y;EE{I|L}DPES{[RE]|[WV]}WY;{NN|[MP]|[D{I|L}]|[EV]}[HC][{I|L}A]SEPD{I|L}[HC];EE{I|L}D{[CT]|[{M(Oxidation (M))|F}G]}Y[KC]YW;{[ET]|[MV]}H{[RE]|[WV]}SEPD{I|L}[HC];[DP]QQ[RD]EPD{I|L}[HC];{[ET]|[MV]}HWWEPD{I|L}[HC];EE{I|L}D{[CT]|[{M(Oxidation (M))|F}G]}Y[KC]WY;[DP][YV][HQ]EPD{I|L}[HC] 4.1977;3.9403;3.8375;3.0088;2.9939;2.916;2.7987;2.7892;2.6337;2.47 +;-;-;-;-;-;-;-;-;- + 609 + 1 1.992 84644.1 0.5699999928474426 4398 3519 7917 DOHH2_400M_050219_2,7919 DOHH2_400M_050219_2,7919,EELDPESREYW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7920 43.879 616.0 182640.0 25 0 16910.0 + 29990 QTDIQGALSAY 11 152 583.7886855626766 1165.5628181921531 2 583.7888061404228 MULTI CID FTMS 0 0 0 7917 107041.8203125 0.2816386254925619 -5 0.1800155639648437 3 Unmodified _QTDIQGALSAY_ ENSG00000198730|ENST00000361367|CTR9 87.25819977447905 0.0022587470437062 2 {[SA]|[TG]}AD{I|L}QGA{I|L}DC 11 5 62.621 0.0 0.0 5.3726 0.0 0.0 0.0 118.08122574514064 118.08122574514064 26.373348600742773 0.0 0.0 0.0 0 0.25 1.154901959985743 1.8882104921644447 0.9247425010840048 {[SA]|[TG]}AD{I|L}QGA{I|L}DC 5.3726 - 4837 1 1.992 90034.7 1.0 4399 3519 7917 DOHH2_400M_050219_2,7920 DOHH2_400M_050219_2,7920,QTDIQGALSAY True True QTDIQGALSAY 43.879349 583.788806140423 2060507.375 7917.0 ENSG00000198730|ENST00000361367|CTR9 6.887986501057942 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7923 43.889 58.0 889970.0 25 0 48473.0 -1 MYFWKRFCFWK 11 57 857.9008790951956 1713.787205257191 2 857.9017822146416 MULTI CID FTMS 0 0 0 7922 798030.1875 0.8247283983008448 4 -0.1433753967285156 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 2 NMPN{I|L}NAD 8 -1 84.59 0.0 0.0 4.9358 0.0 0.0 0.0 841.3974193711547 841.3974193711547 56.697150495474986 0.0 0.0 0.0 0 1.1237125054200234 1.5228787452803376 0.4247425010840047 0.0 NMPN{I|L}NAD 4.9358 - 175 + 1 1.992 42705.7 1.0 4400 3521 7922 DOHH2_400M_050219_2,7923 DOHH2_400M_050219_2,7923,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7924 43.89 82.0 671510.0 25 0 87587.0 + 18005 KSDLFFHDY 9 84 586.2745855532459 1170.5346181732916 2 586.2748290896416 MULTI CID FTMS 0 0 0 7922 398580.21875 0.3242257668155215 -3 0.0595512390136718 2 Unmodified _KSDLFFHDY_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 61.08992128646608 0.0254786290039527 2 KSD{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HDY 9 0 + 92.349 0.0 0.0 7.8895 7.8895 96.994 0.0 0.0 0.0 64.92660950345218 16.478174818886373 16.478174818886373 32.5404627391503 0 2.841129063296272 0.0 0.2614393726401688 0.0 + + KSD{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HDY;{[DS]|[MA]|[CV]|TT}Q{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HDY;KSD{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}CQ[PS];K[HM]{[HG]|PP}{M(Oxidation (M))|F}HDY;KSDC{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Q[PS];{[DS]|[MA]|[CV]|TT}[AG]{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HDY;{[YD]|[{M(Oxidation (M))|F}M]}RR{M(Oxidation (M))|F}HDY;KSD{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}C[AG][PS];{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}A]K{M(Oxidation (M))|F}HDY;{[DS]|[MA]|[CV]|TT}QC{M(Oxidation (M))|F}{[HG]|PP}SKY 7.8895;5.1095;5.057;5.0045;4.7708;4.3229;4.301;4.2741;4.2573;4.2424 +;-;-;-;-;-;-;-;-;- + 439 + 1 1.992 49606.1 1.0 4401 3521 7922 DOHH2_400M_050219_2,7924 DOHH2_400M_050219_2,7924,KSDLFFHDY True True KSDLFFHDY 43.890461 586.274829089642 14796059.0 7922.0 ENSG00000035928|ENST00000349703|RFC1;;nc|ENSG00000035928|P35251|RFC1 8.429430484771729 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7925 43.895 231.0 190190.0 25 0 10310.0 + 33978 SLIHVPIEAP 10 82 538.3089738829074 1074.6033948326146 2 538.3110839724541 MULTI CID FTMS 0 0 0 7922 114690.1484375 0.2951485415334374 -6 0.1856918334960937 3 Unmodified _SLIHVPIEAP_ REV__ENST00000509144.2_1_8:106809432-107072670:-|nuORF;REV__ENST00000520078.5_1_8:106810397-107072670:-|nuORF;REV__ENST00000520594.5_1_8:106799777-107072670:-|nuORF;REV__ENST00000521622.1_1_8:106810653-107072670:-|nuORF;REV__ENST00000524045.6_1_8:107071351-107072670:-|nuORF 6.723162845929126 0.6955379296933136 2 {[TV]|[{I|L}S]}D 3 -1 18.161 0.0 0.0 1.69 0.0 0.0 0.0 756.4368386581074 756.4368386581074 1.9627248839266545 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}D 1.69 - 82 1 1.992 38154.9 1.0 4402 3521 7922 DOHH2_400M_050219_2,7925 DOHH2_400M_050219_2,7925,SLIHVPIEAP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7926 43.909 800.0 153700.0 25 0 22681.0 + 15740 IRPENVIIY 9 95 558.8248855073263 1115.6352180814524 2 558.8243286013603 MULTI CID FTMS 0 0 0 7922 89475.0859375 1.0 0 0.0 4 Unmodified _IRPENVIIY_ ENSG00000107362|ENST00000333421|ABHD17B;nc|ENSG00000107362|Q5VST6-2|ABHD17B 21.53697664764585 0.2571576504437394 2 [YV]P[H{I|L}]V{I|L}{I|L}Y 9 4 + 51.132 0.0 0.0 4.5832 4.5832 85.858 0.0 0.0 0.0 7.014224667125717 38.65742484373364 7.014224667125717 23.010299956639813 0 0.9247425010840048 0.0 0.0 0.0 [YV]P[H{I|L}]V{I|L}{I|L}Y;{[HG]|PP}[KG]{[ET]|[MV]}V{I|L}{I|L}Y 4.5832;2.5207 -;- 86 1 1.992 96621.3 0.4300000071525574 4403 3521 7922 DOHH2_400M_050219_2,7926 DOHH2_400M_050219_2,7926,IRPENVIIY False True IRPENVIIY 43.908648 558.82432860136 689722.1875 7922.0 nc|ENSG00000107362|Q5VST6-2|ABHD17B;;ENSG00000107362|ENST00000333421|ABHD17B 3.9732234477996826 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7928 43.925 800.0 125240.0 25 0 12247.0 + 39768 VEMYDPTRNEW 11 121 720.316538412346 1438.6185238914918 2 720.3170043826103 MULTI CID FTMS 0 0 0 7927 78769.421875 0.3717636514235922 7 -0.2077560424804687 1 Unmodified _VEMYDPTRNEW_ ENSG00000116679|ENST00000367498|IVNS1ABP;ENST00000459929.5_1_1:185267169-185275646:-|nuORF;ENST00000480769.5_1_1:185267169-185274781:-|nuORF 40.72490554402381 0.2012291192650359 2 {NN|[MP]|[D{I|L}]|[EV]}MYD 5 6 49.208 0.0 0.0 3.4205 0.0 0.0 0.0 798.354476398359 798.354476398359 30.21189299069938 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}MYD 3.4205 + + 138 + 1 1.992 73994.4 0.5400000214576721 4404 3522 7927 DOHH2_400M_050219_2,7928 DOHH2_400M_050219_2,7928,VEMYDPTRNEW False True VEMYDPTRNEW 43.925021 720.31700438261 3843683.25 7927.0 ENST00000480769.5_1_1:185267169-185274781:-|nuORF;;ENSG00000116679|ENST00000367498|IVNS1ABP;;ENST00000459929.5_1_1:185267169-185275646:-|nuORF 9.440199851989746 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7929 43.93 264.0 305450.0 25 0 22734.0 + 45304 YSEVLTDTRGLY 12 103 708.8544986797067 1415.6944444262133 2 708.8530151247978 MULTI CID FTMS 0 0 0 7927 163673.78125 0.8522750026300209 -2 0.029296875 2 Unmodified _YSETFRNIHIH_ nc|ENSG00000131188|Q8TB68-2|PRR7;ENSG00000131188|ENST00000323249|PRR7 18.373094154950223 0.6529654022026722 2 YSEV{I|L}TD 7 7 78.76 0.0 0.0 5.5634 0.0 0.0 0.0 605.3049676450114 605.3049676450114 61.75373472475883 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.3807196863200844 0.0 YSEV{I|L}TD 5.5634 - 204 + 1 1.992 61840.8 1.0 4405 3522 7927 DOHH2_400M_050219_2,7929 DOHH2_400M_050219_2,7929,YSETFRNIHIH False False YSEVLTDTRGLY 43.929921 708.853015124798 1260229.75 7927.0 nc|ENSG00000131188|Q8TB68-2|PRR7;;ENSG00000131188|ENST00000323249|PRR7 10.199700673421225 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7930 43.94 556.0 190410.0 25 0 17604.0 + 39584 VCVQSVLRA 9 111 516.2846862701822 1030.5548196071643 2 516.2838012576103 MULTI CID FTMS 0 0 0 7927 111293.21875 0.7776746861248582 -2 0.029296875 3 Carbamidomethyl (C) _VC(Carbamidomethyl (C))VQSVLRA_ ENST00000607711.1_1_6:15244923-15245223:-|nuORF 46.020951573049366 0.0490941689151868 2 [TA]WQSV{I|L}AR 9 5 + 76.216 0.0 0.0 7.3957 7.3957 88.277 0.0 0.0 0.0 55.42780583395468 19.86855180969256 19.86855180969256 6.778259348524358 0 0.3054621874040891 1.5228787452803376 0.6861818737241735 1.2689301784845295 [TA]WQSV{I|L}AR;[TA]DAQSV{I|L}AR;[TA]W[AG]SV{I|L}AR;[TA]DA[AG]SV{I|L}AR;[TA]W[WK]{I|L}AR;[TA]DA[WK]{I|L}AR 7.3957;6.7379;6.5021;5.8486;4.3313;3.6683 -;-;-;-;-;- 126 + 1 1.992 85676.8 1.0 4406 3522 7927 DOHH2_400M_050219_2,7930 DOHH2_400M_050219_2,7930,VCVQSVLRA True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7931 43.954 800.0 356730.0 25 0 13021.0 -1 0 183 959.1131914953642 2874.317745086292 3 959.4486572146416 MULTI CID FTMS 0 0 0 7927 316888.03125 0.2067522128917059 -6 0.1895103454589843 4 2 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDK{I|L}SKNWNNP[C(Carbamidomethyl (C))H]KSAD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 24 -1 + 135.95 0.0 0.0 4.7299 4.7299 70.613 0.0 0.0 0.0 7.997716968650167 45.81862604637078 7.997716968650167 0.0637985349297309 0 1.2614393726401687 2.0 1.524227503252014 2.4534021960761265 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDK{I|L}SKNWNNP[C(Carbamidomethyl (C))H]KSAD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}GNG{M(Oxidation (M))|F}{I|L}QHPNP[C(Carbamidomethyl (C))H]KSAD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}GNG{M(Oxidation (M))|F}{I|L}QHPNP[C(Carbamidomethyl (C))H]QSAD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDK{I|L}SKNWNNP[C(Carbamidomethyl (C))H]KSAN[MN];[MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}GNG{M(Oxidation (M))|F}{I|L}QHPNP[C(Carbamidomethyl (C))H]KSAN[MN];[MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDK{I|L}SKNWNNP[C(Carbamidomethyl (C))H]KSAP[YV];[MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDK{I|L}SKNWNNP[C(Carbamidomethyl (C))H]QSAP[YV];[MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDK{I|L}SQNWNNP[C(Carbamidomethyl (C))H]KSAP[YV];[MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}GNG{M(Oxidation (M))|F}{I|L}QHPNP[C(Carbamidomethyl (C))H]QSAP{[{M(Oxidation (M))|F}D]|MM};[MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}GNG{M(Oxidation (M))|F}{I|L}QHPNP[C(Carbamidomethyl (C))H]KSAP[YV] 4.7299;4.7277;4.7277;4.5555;4.5533;4.3904;4.3904;4.3904;4.3882;4.3882 -;-;-;-;-;-;-;-;-;- 295493 1 1.992 190842.3 0.949999988079071 4407 3522 7927 DOHH2_400M_050219_2,7931 DOHH2_400M_050219_2,7931, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7933 43.96 182.0 353990.0 25 0 63116.0 -1 MKKYIHVAK 9 86 567.3294638107494 1132.6443746882987 2 567.3298828005791 MULTI CID FTMS 0 0 0 7932 318822.78125 0.730116401934653 5 -0.1297531127929687 1 Oxidation (M) _M(Oxidation (M))KKYIHVAK_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 2.059750862983233 0.8427793054688888 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.992 52635.0 1.0 4408 3523 7932 DOHH2_400M_050219_2,7933 DOHH2_400M_050219_2,7933,MKKYIHVAK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7934 43.964 204.0 310250.0 25 0 57356.0 43398 WQRVILCK 8 89 523.3030520939583 1044.5915512547165 2 523.3035766482353 MULTI CID FTMS 0 0 0 7932 202636.5 0.209511813482257 14 -0.5035324096679688 2 Unmodified _WQRVILCK_ ENST00000441433.1_1_7:26961755-26962307:+|nuORF 0.7936320650641473 0.8195151834710337 2 {I|L} 1 7 9.6041 0.0 0.0 0.91941 0.0 0.0 913.4967769400664 0.0 913.4967769400664 0.0 9.604093769761874 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.91941 + + 1 + 1 1.992 55151.3 1.0 4409 3523 7932 DOHH2_400M_050219_2,7934 DOHH2_400M_050219_2,7934,WQRVILCK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7935 43.97 352.0 190420.0 25 0 20770.0 + 6474 EAGGRFVAF 9 104 477.245166405957 952.475779878714 2 477.2448608279228 MULTI CID FTMS 0 0 0 7932 135178.65625 0.6784637046008526 -3 0.0741958618164062 3 Unmodified _EAGGRFVAF_ ENSG00000070010|ENST00000263202|UFD1;nc|ENSG00000070010|Q92890-1|UFD1 28.486842064014134 0.1687311288560894 2 AV[YT]VA{M(Oxidation (M))|F} 7 5 36.484 0.0 0.0 3.8304 0.0 0.0 183.08724269048412 0.0 183.08724269048412 0.0 23.168563304579024 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 AV[YT]VA{M(Oxidation (M))|F} 3.8304 - 84 + 1 1.992 55140.1 1.0 4410 3523 7932 DOHH2_400M_050219_2,7935 DOHH2_400M_050219_2,7935,EAGGRFVAF False True EAGGRFVAF 43.969859 477.244860827923 1209940.125 7932.0 nc|ENSG00000070010|Q92890-1|UFD1;;ENSG00000070010|ENST00000263202|UFD1 5.903191884358724 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7936 43.974 214.0 326120.0 25 0 31657.0 -1 PFVLMIPRA 9 102 530.305715684457 1058.596878435714 2 530.8093139529228 MULTI CID FTMS 0 0 0 7932 149666.203125 0.739145116453142 -5 0.1298561096191406 4 Oxidation (M) _PFVLM(Oxidation (M))IPRA_ ENST00000367815.8_1_1:169094151-169094205:+|nuORF 13.50788311687929 0.4710407108020397 2 [KP]T{M(Oxidation (M))|F}GRKPE 9 -1 + 28.07 0.0 0.0 2.6516 2.6516 74.561 0.0 0.0 0.0 1.1709124234504067 11.871987629411295 1.1709124234504067 8.750612633917001 0 0.0 0.0 0.0 0.4247425010840047 [KP]T{M(Oxidation (M))|F}GRKPE;[KP]G[{M(Oxidation (M))|F}T]RKPE;{M(Oxidation (M))|F}PKR[C(Carbamidomethyl (C))R][VP];{M(Oxidation (M))|F}PKRGT{[SA]|[TG]}[VP];{M(Oxidation (M))|F}PKRGT[VS][PA];{M(Oxidation (M))|F}PKRGT[VP]{[SA]|[TG]};[{I|L}T]{[SA]|[TG]}[KC]{I|L}V[QP];{M(Oxidation (M))|F}PK[WK]{[SA]|[TG]}[VP];{M(Oxidation (M))|F}PK[WK][VS][PA];{M(Oxidation (M))|F}PK[WK][VP]{[SA]|[TG]} 2.6516;1.825;1.5722;1.5722;1.3545;1.1354;0.95514;0.69725;0.47956;0.26045 -;-;-;-;-;-;-;-;-;- 255 1 1.992 55836.1 1.0 4411 3523 7932 DOHH2_400M_050219_2,7936 DOHH2_400M_050219_2,7936,PFVLMIPRA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7937 43.986 709.0 183440.0 25 0 23779.0 + 19006 DLYIRPNI 8 129 502.2819895865396 1002.5494262398792 2 502.2827941775322 MULTI CID FTMS 0 0 0 7932 93776.9453125 0.5269871607496135 -3 0.0741958618164062 5 Unmodified _LDIYRNPL_ ENSG00000092201|ENST00000216297|SUPT16H 38.15118350030904 0.2652218139009398 2 {NN|[MP]|[D{I|L}]|[EV]}Y{I|L}RPN{I|L} 8 4 + 59.644 0.0 0.0 5.9492 5.9492 79.109 0.0 0.0 0.0 46.54493614710597 11.58417361842227 11.58417361842227 2.6979531151190628 0 0.7742275032520141 2.0 0.0 0.6861818737241735 {NN|[MP]|[D{I|L}]|[EV]}Y{I|L}RPN{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}YRPN{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}RPGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}YRPGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[QT]{[TV]|[{I|L}S]}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WR]{[TV]|[{I|L}S]}T{I|L} 5.9492;5.6801;4.6017;4.3326;3.9021;2.8278 -;-;-;-;-;- 197 + 1 1.992 102653.3 1.0 4412 3523 7932 DOHH2_400M_050219_2,7937 DOHH2_400M_050219_2,7937,LDIYRNPL False False DLYIRPNI 43.986208 502.282794177532 1169676.5 7932.0 ENSG00000092201|ENST00000216297|SUPT16H 4.021452347437541 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7939 44.002 669.0 153250.0 25 0 13179.0 + 590 AEITDKLGL 9 128 480.2743908857532 958.5342288383064 2 480.2747375369072 MULTI CID FTMS 0 0 0 7938 80879.828125 0.2503661192443535 6 -0.1488037109375 1 Unmodified _AEITDKLGL_ ENSG00000134287|ENST00000256682|ARF3;ENSG00000143761|ENST00000272102|ARF1;ENST00000444561.2_1_17:43710417-43713807:+|nuORF;ENST00000470670.5_1_1:228284963-228285711:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3 36.12702656103203 0.0967173616627612 2 [TA]AT{I|L}{I|L}G 7 5 35.613 0.0 0.0 3.7154 0.0 0.0 0.0 328.15169644988765 328.15169644988765 3.603458809491656 0.0 0.0 0.0 0 0.0 0.0 1.5303695511246982 0.0 [TA]AT{I|L}{I|L}G 3.7154 - 317 1 1.992 86207.0 1.0 4413 3524 7938 DOHH2_400M_050219_2,7939 DOHH2_400M_050219_2,7939,AEITDKLGL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7940 44.004 125.0 574770.0 25 0 92714.0 + 14890 ILLENFSAEK 10 71 582.3189749988439 1162.6233970644878 2 582.3191406130791 MULTI CID FTMS 0 0 0 7938 417680.84375 0.7527070233538875 -4 0.1068687438964843 2 Unmodified _ILLENFSAEK_ ENST00000560979.1_1_15:49715501-49715549:+|nuORF 53.31671820480216 0.0606844387689228 2 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK 10 0 + 107.71 0.0 0.0 9.2648 9.2648 92.812 0.0 0.0 0.0 88.04866927607691 13.965912507003608 13.965912507003608 9.164539485499262 0 0.805462187404089 2.0 1.1307196863200843 0.6237125054200234 + + {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SAEK 9.2648;8.4765 +;- + 141 + 1 1.992 58176.9 1.0 4414 3524 7938 DOHH2_400M_050219_2,7940 DOHH2_400M_050219_2,7940,ILLENFSAEK True True ILLENFSAEK 44.004302 582.319140613079 6368700.0 7938.0 ENST00000560979.1_1_15:49715501-49715549:+|nuORF 7.45663054784139 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7941 44.018 800.0 151490.0 25 0 7757.8 -1 0 121 973.7887843862952 2918.3445237590854 3 974.1226684451104 MULTI CID FTMS 0 0 0 7938 161863.578125 0.4132289917665892 -4 0.1068687438964843 3 2 [MN]PN{I|L} 5 -1 54.693 0.0 0.0 1.8741 0.0 0.0 0.0 2346.0497095359897 2346.0497095359897 15.725059339022849 0.0 0.0 0.0 0 0.9731975075880328 2.0 0.0 0.4247425010840047 [MN]PN{I|L} 1.8741 - 3455 + 1 1.992 85674.0 0.6499999761581421 4415 3524 7938 DOHH2_400M_050219_2,7941 DOHH2_400M_050219_2,7941, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7942 44.027 477.0 183010.0 25 0 11793.0 + 10447 FTEQWTDGY 9 136 573.7407327545242 1145.4669125758485 2 573.7408325076103 MULTI CID FTMS 0 0 0 7938 154431.953125 1.0 0 0.0 4 Unmodified _FTEQWTDGY_ ENSG00000146872|ENST00000346027|TLK2;nc|ENSG00000146872|Q86UE8-3|TLK2;nc|ENSG00000146872|Q86UE8|TLK2 46.020951573049366 0.0490941689151868 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{M(Oxidation (M))|F}WTDGY 9 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{M(Oxidation (M))|F}WT + + 26.114 29.672 3.7448 2.2798 2.2798 47.733 0.0 0.0 0.0 0.0 -3.557556773697506 -3.557556773697506 0.0 0 0.0 0.0 0.3807196863200844 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{M(Oxidation (M))|F}WTDGY 2.2798 - 433 + 1 1.992 67444.0 1.0 4416 3524 7938 DOHH2_400M_050219_2,7942 DOHH2_400M_050219_2,7942,FTEQWTDGY True True FTEQWTDGY 44.026606 573.74083250761 878945.0 7938.0 nc|ENSG00000146872|Q86UE8-3|TLK2;;nc|ENSG00000146872|Q86UE8|TLK2;;ENSG00000146872|ENST00000346027|TLK2 6.415347417195638 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7944 44.031 20.0 2760300.0 25 0 299870.0 + 14273 IEHGIITNW 9 79 541.7851096152443 1081.5556662972886 2 541.7853881716728 MULTI CID FTMS 0 0 0 7943 2472387.25 0.6868835173707151 2 -0.0300369262695312 1 Unmodified _IEHGIITNW_ ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF 32.30548876998284 0.1201446275138228 2 {I|L}G{I|L}VTNW 7 3 57.093 0.0 0.0 5.2788 0.0 0.0 280.11827284980626 0.0 280.11827284980626 0.0 41.59075170426174 0.0 0.0 0 0.805462187404089 0.0 0.5 0.3807196863200844 {I|L}G{I|L}VTNW 5.2788 - 256 1 1.992 49928.6 1.0 4417 3525 7943 DOHH2_400M_050219_2,7944 DOHH2_400M_050219_2,7944,IEHGIITNW True True IEHGIITNW 44.031406 541.785388171673 43121360.0 7943.0 ENST00000473016.1_1_2:74120109-74129648:+|nuORF;;ENSG00000163017|ENST00000345517|ACTG2;;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;;ENSG00000107796|ENST00000224784|ACTA2;;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;;ENSG00000159251|ENST00000290378|ACTC1;;ENSG00000143632|ENST00000366684|ACTA1 0.4725628097852071 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7945 44.033 72.0 795410.0 25 0 56571.0 + 29438 QLFVRAQEL 9 85 552.3140530657133 1102.6135531982266 2 552.3141967654228 MULTI CID FTMS 0 0 0 7943 624665.75 0.5358491545244399 3 -0.0566825866699218 2 Unmodified _QLFVRAQEL_ ENSG00000149806|ENST00000529639|FAU;ENST00000531357.1_1_11:64889042-64889375:-|nuORF 43.77239144664712 0.0547478964384323 2 Q{I|L}{M(Oxidation (M))|F}V 4 5 45.795 0.0 0.0 4.1533 0.0 0.0 0.0 612.3111807868667 612.3111807868667 19.763786484756864 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 + Q{I|L}{M(Oxidation (M))|F}V 4.1533 + + 299 + 1 1.992 49615.0 1.0 4418 3525 7943 DOHH2_400M_050219_2,7945 DOHH2_400M_050219_2,7945,QLFVRAQEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7947 44.043 401.0 295950.0 25 0 31398.0 + 31764 RSDVEILGY 9 103 526.2742765670639 1050.5340002009275 2 526.2746459841728 MULTI CID FTMS 0 0 0 7946 184435.78125 0.4987395343578292 -5 0.1498641967773437 1 Unmodified _RSDVEILGY_ ENSG00000028116|ENST00000340157|VRK2;nc|ENSG00000028116|Q86Y07-2|VRK2;nc|ENSG00000028116|Q86Y07-3|VRK2;nc|ENSG00000028116|Q86Y07-4|VRK2;nc|ENSG00000028116|Q86Y07-5|VRK2 29.84058131909904 0.1515068451768857 2 VE{I|L}{I|L}GY 6 3 62.211 0.0 0.0 5.9219 0.0 0.0 358.1599293439469 0.0 358.1599293439469 0.0 48.39902832107995 0.0 0.0 0 1.424742501084005 0.0 0.3807196863200844 0.0 + VE{I|L}{I|L}GY 5.9219 + + 252 1 1.992 92374.3 1.0 4419 3526 7946 DOHH2_400M_050219_2,7947 DOHH2_400M_050219_2,7947,RSDVEILGY False True RSDVEILGY 44.042837 526.274645984173 4292479.5 7946.0 nc|ENSG00000028116|Q86Y07-5|VRK2;;nc|ENSG00000028116|Q86Y07-3|VRK2;;ENSG00000028116|ENST00000340157|VRK2;;nc|ENSG00000028116|Q86Y07-4|VRK2;;nc|ENSG00000028116|Q86Y07-2|VRK2 6.421953996022542 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7948 44.057 800.0 142680.0 25 0 32170.0 + 27335 PHSSPLALL 9 140 467.7716192626435 933.5286855920872 2 467.7713500857353 MULTI CID FTMS 0 0 0 7946 135411.0625 0.0291096407596264 -10 0.3139686584472656 2 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 53.57557251787612 0.0325303259649373 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPSTA{I|L}{I|L} 9 4 + 49.256 0.0 0.0 5.2763 5.2763 74.227 0.0 0.0 0.0 4.168950068207451 16.478174818886373 4.168950068207451 0.8732784294804219 0 0.9247425010840048 0.0 1.1237125054200234 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPSTA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP]TA{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}TTA{I|L}{I|L};[VP]HPSTA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};[{I|L}A][RD]YA{I|L}{I|L};[TA][VP]H[PS]{I|L}{I|L};[{I|L}A][W{M(Oxidation (M))|F}]TA{I|L}{I|L};[PS]H[VP]TA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA][PS]{I|L}{I|L} 5.2763;5.1827;4.8297;4.6612;4.6497;4.2351;4.1661;4.13;4.0672;4.0246 -;-;-;-;-;-;-;-;-;- 869 1 1.992 88717.6 0.5 4420 3526 7946 DOHH2_400M_050219_2,7948 DOHH2_400M_050219_2,7948,PHSSPLALL True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7950 44.067 386.0 231980.0 25 0 10983.0 -1 0 85 873.914100818394 1745.813648703588 2 873.9157592654228 MULTI CID FTMS 0 0 0 7949 158936.234375 0.2733283815681693 11 -0.4916343688964844 1 2 [MN]PN{I|L}NWQ[WR]{M(Oxidation (M))|F}{I|L}Q 13 -1 + 98.0 0.0 0.0 5.6135 5.6135 74.288 0.0 0.0 0.0 52.32126347338021 13.05462187404089 13.05462187404089 0.149643610194488 0 1.1237125054200234 1.5228787452803376 0.0 1.885151878060192 [MN]PN{I|L}NWQ[WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NAGW[WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NADQ[KQ]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}NEGQ[KQ]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}NQW[WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}GGWQ[WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NW[AG][WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}NWQ[WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}NAGW[WR]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}GGAGW[WR]{M(Oxidation (M))|F}{I|L}Q 5.6135;5.6049;5.4029;5.4029;5.2229;5.0938;5.0938;5.0938;5.0865;5.0865 -;-;-;-;-;-;-;-;-;- 1747 + 1 1.992 67477.2 1.0 4421 3527 7949 DOHH2_400M_050219_2,7950 DOHH2_400M_050219_2,7950, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7951 44.073 322.0 342980.0 25 0 66642.0 16807 KGPFATFK 8 120 448.2569101784929 0 448.2585632205009 PEAK CID FTMS 0 0 0 7949 182345.203125 0.7471637295427145 -3 0.0704345703125 2 Unmodified _KGPFATFK_ ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF 2.302733041254933 0.5920993303473642 2 P 1 7 3.0989 0.0 0.0 0.34644 0.0 0.0 621.3997628845265 173.02437769107658 794.424140575603 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.34644 + + 10 + 1 1.992 92839.1 1.0 4422 3527 7949 DOHH2_400M_050219_2,7951 DOHH2_400M_050219_2,7951,KGPFATFK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7952 44.083 568.0 280750.0 25 0 24002.0 + 23344 LTDDGNKWLY 10 137 612.7984751321814 1223.5823973311626 2 612.7985107302666 MULTI CID FTMS 0 0 0 7949 129312.421875 0.0149462232539737 -8 0.2070350646972656 3 Unmodified _LTDDGNKWLY_ ENSG00000175166|ENST00000310118|PSMD2;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2 121.3458533713876 0.000430218257633 2 {[QN]|[E{I|L}]|[KN]}GDDWT{I|L}{I|L}Y 10 6 + 94.782 0.0 0.0 7.7462 7.7462 83.973 0.0 0.0 0.0 18.537821640704536 15.026975159433531 15.026975159433531 2.7865969499212184 0 0.9247425010840048 1.5228787452803376 1.5640441945990624 2.15803062334053 {[QN]|[E{I|L}]|[KN]}GDDWT{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDDW{I|L}T{I|L}Y;{[QN]|[E{I|L}]|[KN]}GWDDT{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}GWDD{I|L}T{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDWDT{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDDA{I|L}C{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDWD{I|L}T{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDDTW{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}GDDT{I|L}W{I|L}Y;{I|L}TDD[NG]KW{I|L}Y 7.7462;7.5185;7.0328;6.8051;6.7545;6.6516;6.5267;6.5041;6.4904;6.2312 -;-;-;-;-;-;-;-;-;+ + 6267 1 1.992 119299.0 1.0 4423 3527 7949 DOHH2_400M_050219_2,7952 DOHH2_400M_050219_2,7952,LTDDGNKWLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7954 44.092 338.0 274140.0 25 0 16460.0 + 25975 NLPPHIIRL 9 105 358.2250351249064 1071.653275974919 3 358.2251159548759 MULTI CID FTMS 0 0 0 7953 148770.40625 0.2636033331723875 18 -0.9911613464355468 1 Unmodified _NLPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 10.150570793230772 0.5619192000662246 2 {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L} 6 3 46.911 0.0 0.0 4.3775 0.0 0.0 0.0 397.257245936856 397.257245936856 34.69273760456403 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}PPH{I|L} 4.3775 + + 66 + 1 1.992 79708.9 1.0 4424 3528 7953 DOHH2_400M_050219_2,7954 DOHH2_400M_050219_2,7954,NLPPHIIRL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7955 44.103 607.0 159340.0 25 0 23620.0 + + -1 AEIIGGERSVF 11 110 589.3427806603354 1176.6710083874707 2 589.3420287966728 MULTI CID FTMS 0 0 0 7953 114842.7109375 0.2354078633471573 -11 0.2836380004882812 2 Oxidation (M) _ISIVIKCRVM(Oxidation (M))_ ENSG00000142207|ENST00000382751|URB1 3.2813086475875832 0.7114585191678878 2 {[TV]|[{I|L}S]}{I|L}{I|L}V 5 -1 22.218 0.0 0.0 1.8882 0.0 0.0 0.0 648.2880343072874 648.2880343072874 9.822712330395683 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}{I|L}V 1.8882 - 163 + 1 1.992 78002.6 1.0 4425 3528 7953 DOHH2_400M_050219_2,7955 DOHH2_400M_050219_2,7955,ISIVIKCRVM False False AEIIGGERSVF 44.102575 589.342028796673 203809.453125 7953.0 ENSG00000142207|ENST00000382751|URB1 3.858710209528605 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7956 44.116 800.0 126390.0 25 0 5931.4 + 30521 REKMTQIMF 9 144 592.3010361664237 1182.5875193996474 2 592.3016845583916 MULTI CID FTMS 0 0 0 7953 104665.625 0.9771223174483492 1 -0.0331039428710937 3 Unmodified _REKMTQIMF_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 36.506200033944 0.094635877243972 2 TQ{I|L}M{M(Oxidation (M))|F} 5 4 38.505 0.0 0.0 3.256 0.0 0.0 544.2789784162125 0.0 544.2789784162125 0.0 26.51507067384769 0.0 0.0 0 0.8252574989159953 0.0 0.2887254899964357 0.6307196863200843 + TQ{I|L}M{M(Oxidation (M))|F} 3.256 + + 475 1 1.992 77412.4 0.5 4426 3528 7953 DOHH2_400M_050219_2,7956 DOHH2_400M_050219_2,7956,REKMTQIMF True True REKMTQIMF 44.116404 592.301684558392 658809.5 7953.0 ENST00000480297.5_1_10:90700968-90708687:-|nuORF;;ENSG00000188219|ENST00000683005|POTEE;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;;ENST00000446382.2_1_9:6834760-6835018:+|nuORF;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000415776.1_1_Y:19869357-19869702:-|nuORF;;ENSG00000222038|ENST00000409602|POTEJ;;ENSG00000169067|ENST00000423391|ACTBL2;;ENSG00000163017|ENST00000345517|ACTG2;;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENSG00000075624|ENST00000646664|ACTB;;ENSG00000196604|ENST00000409914|POTEF;;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;;ENSG00000107796|ENST00000224784|ACTA2;;ENSG00000159251|ENST00000290378|ACTC1;;ENSG00000196834|ENST00000451531|POTEI;;ENSG00000184009|ENST00000573283|ACTG1 5.30666446685791 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7958 44.121 56.0 914860.0 25 0 227700.0 30242 QWTSRKRK 8 62 545.3162561026879 1088.6179592721758 2 545.3167602419853 MULTI CID FTMS 0 0 0 7957 891607.0625 0.845138195256562 -2 0.0597496032714843 1 Unmodified _QWTSRKRK_ ENST00000275820.3_1_7:156745216-156745255:+|nuORF 2.302733041254933 0.8103549651115762 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.992 44840.6 1.0 4427 3529 7957 DOHH2_400M_050219_2,7958 DOHH2_400M_050219_2,7958,QWTSRKRK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7959 44.135 800.0 114470.0 25 0 23604.0 + 90 AAGSHVIIL 9 112 440.7661076087003 879.5176622842006 2 440.7661010622978 MULTI CID FTMS 0 0 0 7957 102937.125 0.081932556773698 12 -0.7194747924804688 2 Unmodified _AAGSHVIIL_ ENSG00000169188|ENST00000374987|APEX2 28.486842064014134 0.1687311288560894 2 AA[HT]AA{I|L}{I|L}{I|L} 9 4 + 47.062 0.0 0.0 5.3508 5.3508 75.499 0.0 0.0 0.0 9.321355998091434 31.57698754585809 9.321355998091434 1.7609125905568137 0 0.5 1.5228787452803376 0.0 0.0 AA[HT]AA{I|L}{I|L}{I|L};AA[HT]{I|L}AA{I|L}{I|L};AA[HT]A{I|L}A{I|L}{I|L};AA[HT]{I|L}A{I|L}A{I|L};AA[HT]A{I|L}{I|L}A{I|L};[HV][SG]AA{I|L}{I|L}{I|L};[HV][SG]{I|L}AA{I|L}{I|L};[HV][SG]A{I|L}A{I|L}{I|L};[HV]{[QS]|[NT]}A{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[HN]A{I|L}{I|L}{I|L} 5.3508;5.1506;4.6663;4.2399;3.7555;3.2189;3.0187;2.5344;2.4824;2.4824 -;-;-;-;-;-;-;-;-;- 200 1 1.992 78171.3 0.5 4428 3529 7957 DOHH2_400M_050219_2,7959 DOHH2_400M_050219_2,7959,AAGSHVIIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7961 44.153 800.0 118460.0 25 0 5109.7 + 23433 LTEVDNYHFY 10 140 650.7960894645447 1299.577625995889 2 650.7969848513603 MULTI CID FTMS 0 0 0 7960 35773.1640625 0.2318321257279933 1 -0.0267829895019531 1 Unmodified _LTEVDNYHFY_ ENSG00000116044|ENST00000397062|NFE2L2;nc|ENSG00000116044|Q16236-2|NFE2L2;nc|ENSG00000116044|Q16236-3|NFE2L2 57.72198328787511 0.0425618229276495 2 {I|L}TEVDNYH{M(Oxidation (M))|F}Y 10 0 + 89.423 0.0 0.0 6.8809 6.8809 86.918 0.0 0.0 0.0 72.08963892957203 3.979400086720375 3.979400086720375 6.690840781556204 0 0.6861818737241735 2.0 0.4247425010840047 0.0 + + {I|L}TEVDNYH{M(Oxidation (M))|F}Y;{I|L}TEVDNVD[PS][DP];{I|L}TEVDGGYH{M(Oxidation (M))|F}Y;{I|L}TEVDNVD[DP][PS];{I|L}TEVDGGVD[PS][DP];{I|L}TE[QA]EYH{M(Oxidation (M))|F}Y;{I|L}TEVDGGVD[DP][PS];{I|L}TE[QA]EVD[PS][DP];{I|L}TE[QA]EVD[DP][PS];{I|L}TE[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][{I|L}A]H{M(Oxidation (M))|F}Y 6.8809;6.3661;6.1757;5.9366;5.666;5.4381;5.2365;4.9232;4.4937;4.323 +;-;-;-;-;-;-;-;-;- + 1332 + 1 1.992 76171.4 0.6399999856948853 4429 3530 7960 DOHH2_400M_050219_2,7961 DOHH2_400M_050219_2,7961,LTEVDNYHFY True True LTEVDNYHFY 44.15273 650.79698485136 621977.3125 7960.0 nc|ENSG00000116044|Q16236-3|NFE2L2;;ENSG00000116044|ENST00000397062|NFE2L2;;nc|ENSG00000116044|Q16236-2|NFE2L2 9.556039492289225 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7962 44.155 119.0 429440.0 25 0 65894.0 + 477 AEGEINNVQW 10 93 580.2726050762218 1158.5306572192435 2 580.2725707888603 MULTI CID FTMS 0 0 0 7960 443403.1875 1.0 0 0.0 2 Unmodified _AEGEINNVQW_ ENSG00000136485|ENST00000614556|DCAF7;nc|ENSG00000136485|P61962-2|DCAF7 45.69961567697781 0.105390671673896 2 {[CP]|[EA]}GE{I|L}{NN|[MP]|[D{I|L}]|[EV]}VQW 10 0 {[CP]|[EA]}GE{I|L}{NN|[MP]|[D{I|L}]|[EV]}V + + 24.821 17.898 2.1658 2.1424 2.1424 47.603 0.0 0.0 0.0 0.0 -0.3470403574558389 -0.3470403574558389 0.0 0 0.5 0.0 0.0 0.4247425010840047 + + {[CP]|[EA]}GE{I|L}{NN|[MP]|[D{I|L}]|[EV]}VQW 2.1424 + + 271 + 1 1.992 46149.8 1.0 4430 3530 7960 DOHH2_400M_050219_2,7962 DOHH2_400M_050219_2,7962,AEGEINNVQW True True AEGEINNVQW 44.155207 580.27257078886 2944517.5 7960.0 ENSG00000136485|ENST00000614556|DCAF7;;nc|ENSG00000136485|P61962-2|DCAF7 8.082267125447592 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7963 44.162 367.0 289410.0 25 0 44236.0 + 27589 PLDIVKDL 8 123 456.7728900965899 0 456.7723876833916 PEAK CID FTMS 0 0 0 7960 137042.671875 1.0 0 0.0 3 Unmodified _PLDIVKDL_ REV__nc|ENSG00000177707|Q9NQS3-3|NECTIN3 20.871210003555333 0.4015059659087983 2 {I|L}SVA 4 -1 23.844 0.0 0.0 2.6159 0.0 0.0 473.28420074806417 65.0040758722289 538.2882766202931 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 {I|L}SVA 2.6159 - 50 + 1 1.992 84931.6 1.0 4431 3530 7960 DOHH2_400M_050219_2,7963 DOHH2_400M_050219_2,7963,PLDIVKDL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7965 44.167 132.0 580990.0 25 0 70983.0 + 18006 KSDLFFHDY 9 107 586.2745855532459 1170.5346181732916 2 586.2749511599541 MULTI CID FTMS 0 0 0 7964 437091.34375 0.3555527079096182 7 -0.3864822387695312 1 Unmodified _KSDLFFHDY_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 83.42873516780209 0.0166860047644719 2 KSD{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HDY 9 0 + 85.447 0.0 0.0 7.2998 7.2998 95.083 0.0 0.0 0.0 25.42674056792244 14.973024840566469 14.973024840566469 21.695925227640984 0 2.610924374808178 0.0 0.6307196863200843 0.0 + + KSD{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HDY;KSD{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y[HD];[TP][YT]K{M(Oxidation (M))|F}HDY;KSDC{M(Oxidation (M))|F}R[RP]Y;{[{M(Oxidation (M))|F}H]|[RQ]}D{M(Oxidation (M))|F}{I|L}SKDY;{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}A]K{M(Oxidation (M))|F}HDY;{[{M(Oxidation (M))|F}H]|[RQ]}D{M(Oxidation (M))|F}{I|L}DSKY;{[{M(Oxidation (M))|F}H]|[RQ]}D{M(Oxidation (M))|F}{I|L}SDKY;{[YD]|[{M(Oxidation (M))|F}M]}RR{M(Oxidation (M))|F}HDY;K[HM]{[HG]|PP}{M(Oxidation (M))|F}HDY 7.2998;5.4463;5.2648;5.1406;4.9505;4.9259;4.8824;4.8824;4.7801;4.7604 +;-;-;-;-;-;-;-;-;- + 1318 + 1 1.992 61662.2 1.0 4432 3531 7964 DOHH2_400M_050219_2,7965 DOHH2_400M_050219_2,7965,KSDLFFHDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7966 44.17 173.0 162210.0 25 0 15618.0 + 38765 TVDELSKRK 9 57 538.3089738829074 1074.6033948326146 2 538.3093749880791 MULTI CID FTMS 0 0 0 7964 274504.125 0.7064206755544804 4 -0.1524543762207031 2 Unmodified _TVDELSKRK_ REV__ENSG00000039560|ENST00000265109|RAI14;REV__nc|ENSG00000039560|Q9P0K7-2|RAI14;REV__nc|ENSG00000039560|Q9P0K7-3|RAI14;REV__nc|ENSG00000039560|Q9P0K7-4|RAI14 4.3292370932331545 0.7635526921153418 2 {[TV]|[{I|L}S]}D 3 -1 14.181 0.0 0.0 1.3197 0.0 0.0 0.0 756.436224993024 756.436224993024 7.191512336730032 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[TV]|[{I|L}S]}D 1.3197 + + 7 1 1.992 26284.6 1.0 4433 3531 7964 DOHH2_400M_050219_2,7966 DOHH2_400M_050219_2,7966,TVDELSKRK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7967 44.179 462.0 345910.0 25 0 83199.0 + -1 QEDWPPKPVY 10 92 629.3827283490571 628.375451882457 1 629.3823730349541 MULTI CID FTMS 0 0 0 7964 173791.96875 0.4028064629610033 -4 0.1051521301269531 3 ENST00000444129.6_1_12:21654122-21654191:-|nuORF 2 Y 1 -1 13.495 0.0 0.0 2.1476 0.0 0.0 447.30117012151794 0.0 447.30117012151794 0.0 6.0475750727131565 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.1476 - 37 + 1 1.992 122737.7 1.0 4434 3531 7964 DOHH2_400M_050219_2,7967 DOHH2_400M_050219_2,7967, False False QEDWPPKPVY 44.178655 629.382373034954 586926.0 7964.0 ENST00000444129.6_1_12:21654122-21654191:-|nuORF 5.392112572987874 2.0 False 10.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 7968 44.193 800.0 194630.0 25 0 9346.0 + 20947 LNGGPLAES 9 134 857.4372300462459 856.4299535796458 1 857.4379150271416 MULTI CID FTMS 0 0 0 7964 106205.125 1.0 0 0.0 4 Unmodified _LNGGPLAES_ REV__ENSG00000164037|ENST00000296422|SLC9B1;REV__nc|ENSG00000164037|Q4ZJI4-3|SLC9B1 16.942295170755138 0.3780752226737986 2 [NP]{I|L}NAD[{I|L}T] 8 -1 + 50.623 0.0 0.0 5.9109 5.9109 76.907 0.0 0.0 0.0 0.9691001300805624 6.989700043360188 0.9691001300805624 0.9691001300805624 0 0.0 1.0969100130080565 0.0 0.4247425010840047 [NP]{I|L}NAD[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}PNAD[{I|L}T];[NP]{I|L}NA[NS]K;{[QV]|[N{I|L}]|[RA]|[KV]}PNA[NS]K;[NP]{I|L}GGAD[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}PGGAD[{I|L}T];[NP]{I|L}GGA[NS]K;{[QV]|[N{I|L}]|[RA]|[KV]}PGGA[NS]K;[KA][Y{M(Oxidation (M))|F}]D[{I|L}T];[KA][Y{M(Oxidation (M))|F}][NS]K 5.9109;5.7977;5.0023;4.8891;4.8294;4.7162;3.9208;3.8076;1.4882;0.57964 -;-;-;-;-;-;-;-;-;- 184 1 1.992 106705.5 0.6200000047683716 4435 3531 7964 DOHH2_400M_050219_2,7968 DOHH2_400M_050219_2,7968,LNGGPLAES False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7969 44.206 800.0 107480.0 25 0 3034.6 -1 0 77 697.5222864375601 0 697.4408447146416 PEAK CID FTMS 0 0 0 7964 17274.369140625 1.0 0 0.0 5 2 {I|L}M 2 -1 7.0783 0.0 0.0 0.50813 0.0 0.0 877.7525674046138 268.13007532291255 1145.8826427275264 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}M 0.50813 - 14 + 1 1.992 66888.1 0.5299999713897705 4436 3531 7964 DOHH2_400M_050219_2,7969 DOHH2_400M_050219_2,7969, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7971 44.211 91.0 558720.0 25 0 40697.0 -1 0 73 959.1131914953642 2874.317745086292 3 959.4481078982352 MULTI CID FTMS 0 0 0 7970 917562.0 0.5986593220861492 4 -0.1917381286621093 1 2 [MN]PN 4 -1 42.747 0.0 0.0 1.4872 0.0 0.0 0.0 2415.115602447001 2415.115602447001 28.935078169319297 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.4247425010840047 [MN]PN 1.4872 - 114 + 1 1.992 44710.1 1.0 4437 3532 7970 DOHH2_400M_050219_2,7971 DOHH2_400M_050219_2,7971, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7972 44.225 800.0 184780.0 25 0 7584.7 -1 0 124 864.9101621910369 1727.8057714488737 2 865.4125244021416 MULTI CID FTMS 0 0 0 7970 143526.65625 0.3274030122183757 -3 0.0899314880371093 2 2 [MN]PN{I|L}NEAQ 9 -1 76.609 0.0 0.0 4.4339 0.0 0.0 0.0 713.3379842865836 713.3379842865836 41.687522094009 0.0 0.0 0.0 0 1.4489700043360187 1.5228787452803376 0.0 1.1307196863200843 [MN]PN{I|L}NEAQ 4.4339 - 1229 + 1 1.992 100727.4 0.7200000286102295 4438 3532 7970 DOHH2_400M_050219_2,7972 DOHH2_400M_050219_2,7972, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7973 44.239 800.0 136260.0 25 0 10876.0 -1 0 109 952.775510190024 2855.3047011702715 3 953.4432861208916 MULTI CID FTMS 0 0 0 7970 114748.4453125 0.5321592989430872 -4 0.1230354309082031 3 2 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 6 -1 28.478 0.0 0.0 0.99737 0.0 0.0 0.0 2134.98747639904 2134.98747639904 13.430730810643468 0.0 0.0 0.0 0 0.0 2.0 0.2742275032520141 0.6861818737241735 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 0.99737 - 3192 1 1.992 79588.8 0.6399999856948853 4439 3532 7970 DOHH2_400M_050219_2,7973 DOHH2_400M_050219_2,7973, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 7975 44.247 212.0 525900.0 25 0 73387.0 + 16144 ITVKNPRES 9 124 522.2955107227056 1042.576468512211 2 522.2958862185478 MULTI CID FTMS 0 0 0 7974 327394.1875 0.719486933417502 5 -0.3090133666992187 1 Unmodified _ITVKNPRES_ REV__ENSG00000170006|ENST00000304385|TMEM154 7.289230182591677 0.6602208344931196 2 Q 1 -1 2.2185 0.0 0.0 0.21279 0.0 0.0 608.360132819267 303.1450594537719 911.505192273039 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.21279 - 73 + 1 1.997 88720.4 1.0 4440 3533 7974 DOHH2_400M_050219_2,7975 DOHH2_400M_050219_2,7975,ITVKNPRES False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7976 44.256 529.0 252470.0 25 0 39021.0 7892 ELNLLQKLY 9 125 567.3294638107494 1132.6443746882987 2 567.3295776247978 MULTI CID FTMS 0 0 0 7974 150574.5 0.344821382374505 15 -0.9526100158691406 2 Unmodified _ELNLLQKLY_ ENSG00000124721|ENST00000327475|DNAH8;nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8 4.75600775471527 0.7486543447549536 2 Y 1 8 13.099 0.0 0.0 1.1565 0.0 0.0 951.5700166334144 0.0 951.5700166334144 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1565 + + 48 + 1 1.997 105264.6 1.0 4441 3533 7974 DOHH2_400M_050219_2,7976 DOHH2_400M_050219_2,7976,ELNLLQKLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7978 44.273 800.0 230690.0 25 0 26746.0 + 14891 ILLENFSAEK 10 150 582.3189749988439 1162.6233970644878 2 582.3199340701103 MULTI CID FTMS 0 0 0 7977 124270.0390625 0.2239483390116708 6 -0.4758682250976562 1 Unmodified _ILLENFSAEK_ ENST00000560979.1_1_15:49715501-49715549:+|nuORF 78.06048673739656 0.0186573233964999 2 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK 10 0 + 103.59 0.0 0.0 8.9098 8.9098 92.612 0.0 0.0 0.0 70.76133523874674 15.088643834802156 15.088643834802156 9.164539485499262 0 0.7742275032520141 2.0 1.8525684359364407 0.1505149978319906 + + {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EE{I|L}[RD]Y;{I|L}{I|L}{I|L}ENKS[PS]Y;{I|L}{I|L}{I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}SAEK;{I|L}{I|L}{I|L}EGGKS[PS]Y;{I|L}{I|L}{I|L}EMVV[PS]Y;{I|L}{I|L}{I|L}{M(Oxidation (M))|F}N{[WT]|[RM]}EK;{I|L}{I|L}{I|L}[NS]G{I|L}S[PS]Y;{I|L}{I|L}{[QS]|[NT]}VG{I|L}S[PS]Y 8.9098;8.1216;6.9767;6.9328;6.8461;6.1445;5.8817;5.4582;5.4347;4.8274 +;-;-;-;-;-;-;-;-;- + 1567 + 1 1.997 138980.4 0.550000011920929 4442 3534 7977 DOHH2_400M_050219_2,7978 DOHH2_400M_050219_2,7978,ILLENFSAEK True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7979 44.287 800.0 201530.0 25 0 27501.0 + 13147 HFKSTIGPI 9 155 500.2833430220061 998.5521331108124 2 500.2835265994072 MULTI CID FTMS 0 0 0 7977 100954.1796875 0.5367310967085295 -3 0.0947227478027343 2 Unmodified _HFKSTIGPI_ REV__ENSG00000180773|ENST00000326402|SLC36A4;REV__ENST00000526735.1_1_11:92887247-92899179:-|nuORF;REV__ENST00000527503.1_1_11:92881705-92887463:-|nuORF;REV__nc|ENSG00000180773|Q6YBV0-2|SLC36A4 7.289230182591677 0.6602208344931196 2 W 1 -1 11.109 0.0 0.0 1.1125 0.0 0.0 794.461677033467 0.0 794.461677033467 0.0 0.4353918981962046 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1125 - 86 + 1 1.997 122088.3 0.4300000071525574 4443 3534 7977 DOHH2_400M_050219_2,7979 DOHH2_400M_050219_2,7979,HFKSTIGPI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7980 44.301 800.0 229030.0 25 0 22634.0 + + 10154 FPKWKPGSL 9 151 530.305715684457 1058.596878435714 2 530.8087646365166 MULTI CID FTMS 0 0 0 7977 100349.2734375 0.4955873393741451 6 -0.4758682250976562 3 Unmodified _FPWVWVLI_ nc|ENSG00000170312|P06493-2|CDK1;ENSG00000170312|ENST00000395284|CDK1 11.114462752807354 0.7467182956244686 2 {M(Oxidation (M))|F}PKRG{M(Oxidation (M))|F}T 7 -1 29.042 0.0 0.0 2.7434 0.0 0.0 0.0 222.12551294498283 222.12551294498283 15.942897942617478 0.0 0.0 0.0 0 0.2059771852360797 0.0 0.0 0.0 {M(Oxidation (M))|F}PKRG{M(Oxidation (M))|F}T 2.7434 - 308 + 1 1.997 140754.0 0.4300000071525574 4444 3534 7977 DOHH2_400M_050219_2,7980 DOHH2_400M_050219_2,7980,FPWVWVLI False False FPKWKPGSL 44.300557 530.808764636517 850736.3125 7977.0 nc|ENSG00000170312|P06493-2|CDK1;;ENSG00000170312|ENST00000395284|CDK1 3.320882558822632 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7981 44.314 800.0 160760.0 25 0 7576.7 -1 MYFWKRFCFWK 11 133 857.9008790951956 1713.787205257191 2 858.4041015505791 MULTI CID FTMS 0 0 0 7977 117482.3203125 0.1395629807387467 17 -1.0322303771972656 4 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 2 [NP]{I|L}DAN[YK]DD{I|L}NP[EP] 15 -1 + 70.59 0.0 0.0 4.119 4.119 75.035 0.0 0.0 0.0 5.351132016973494 7.61760834195475 5.351132016973494 5.351132016973494 0 0.0 1.154901959985743 0.3807196863200844 0.6694451763165201 [NP]{I|L}DAN[YK]DD{I|L}NP[EP];{[QV]|[N{I|L}]|[RA]|[KV]}PDAN[YK]DD{I|L}NP[EP];[NP]{I|L}DAGG[YK]DD{I|L}NP[EP];[NP]{I|L}DAN[YK]DD{I|L}GGP[EP];[NP]{I|L}N[HS][VP]GDD{I|L}NP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}WDQ[KP][EC]{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DWQ[KP][EC]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PDAN[YK]DMPNP[EP];[NP]{I|L}N{[DA]|[EG]}[YK]DD{I|L}NP[EP];{[QV]|[N{I|L}]|[RA]|[KV]}PDAGG[YK]DD{I|L}NP[EP] 4.119;3.8067;3.592;3.592;3.3435;3.3331;3.3331;3.3293;3.3033;3.2798 -;-;-;-;-;-;-;-;-;- 3503 1 1.997 90554.1 0.6700000166893005 4445 3534 7977 DOHH2_400M_050219_2,7981 DOHH2_400M_050219_2,7981,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7983 44.319 23.0 3222100.0 25 0 1001700.0 + 27336 PHSSPLALL 9 78 467.7716192626435 933.5286855920872 2 467.7716247439384 MULTI CID FTMS 0 0 0 7982 2763968.25 0.5941768814384233 -1 0.0577316284179687 1 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 63.562846038646086 0.0241094678104353 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}A[PS]{I|L}{I|L} 9 4 + 58.65 0.0 0.0 6.2826 6.2826 82.844 0.0 0.0 0.0 4.771212547196626 16.236352082229786 4.771212547196626 4.771212547196626 0 0.5 0.0 2.079689690656103 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}A[PS]{I|L}{I|L};[PS]H{I|L}A[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VTA[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}[PS]A{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPSTA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}A{I|L}[PS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VREA{I|L}{I|L};[PS]{I|L}AH[PS]{I|L}{I|L};[VP]TAH[PS]{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}TTA{I|L}{I|L} 6.2826;5.7715;5.6786;5.5297;5.4552;5.4034;5.2497;5.2284;5.2284;5.148 -;-;-;-;-;-;-;-;-;- 1000 1 1.997 61394.6 1.0 4446 3535 7982 DOHH2_400M_050219_2,7983 DOHH2_400M_050219_2,7983,PHSSPLALL True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 7984 44.323 235.0 406530.0 25 0 65749.0 + 23240 LSTLRQILY 9 119 553.8307808578033 1105.6470087824066 2 553.8307983279228 MULTI CID FTMS 0 0 0 7982 243809.640625 0.5833289843586447 7 -0.5851097106933594 2 Unmodified _LSTLRQILY_ REV__ENST00000539080.1_1_12:122865079-122884682:-|nuORF 6.2057823575117 0.6980434486082533 2 NSMT 4 -1 20.165 0.0 0.0 1.8238 0.0 0.0 258.2229796614841 411.2254122369751 669.4483918984591 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 NSMT 1.8238 - 80 + 1 1.997 75226.0 1.0 4447 3535 7982 DOHH2_400M_050219_2,7984 DOHH2_400M_050219_2,7984,LSTLRQILY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7985 44.33 389.0 301670.0 25 0 54595.0 + 40703 VLGGTRRP 8 116 428.26194814577735 854.5093433583547 2 428.2619506716728 MULTI CID FTMS 0 0 0 7982 141180.265625 0.1269650806216178 -2 0.0749855041503906 3 Unmodified _VLGGTRRP_ REV__ENST00000350148.9_1_13:37453875-37494358:-|nuORF;REV__ENST00000483941.1_1_13:37453875-37494793:-|nuORF 2.577480529830294 0.808687252328423 2 D 1 -1 1.5938 0.0 0.0 0.18652 0.0 0.0 332.3321715827672 404.1295260065063 736.4616975892735 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.18652 - 2 + 1 1.997 95431.3 1.0 4448 3535 7982 DOHH2_400M_050219_2,7985 DOHH2_400M_050219_2,7985,VLGGTRRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7986 44.344 800.0 267200.0 25 0 29262.0 + -1 AELPGVSRW 9 156 507.7720365825523 1013.5295202319046 2 507.7718688845634 MULTI CID FTMS 0 0 0 7982 86909.7109375 0.2982435590911065 -2 0.0749855041503906 4 Carbamidomethyl (C) _AEIPVGIC(Carbamidomethyl (C))R_ nc|ENSG00000167397|Q9BQB6-2|VKORC1;nc|ENSG00000167397|Q9BQB6-3|VKORC1 30.63653989081413 0.1413794767160703 2 {[CP]|[EA]}{I|L}PGV[C(Carbamidomethyl (C))R]{I|L} 9 -1 + 42.954 0.0 0.0 4.238 4.238 71.061 0.0 0.0 0.0 4.774619429583851 2.2078663081304413 2.2078663081304413 1.706962271689747 0 1.305462187404089 0.0 0.0 0.4247425010840047 {[CP]|[EA]}{I|L}PGV[C(Carbamidomethyl (C))R]{I|L};{[CP]|[EA]}{I|L}PR[C(Carbamidomethyl (C))R]{I|L};{[CP]|[EA]}{I|L}PGRPQ{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}PGV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GP;{[CP]|[EA]}{I|L}PR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GP;{[CP]|[EA]}{I|L}PGV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}G{I|L};{[CP]|[EA]}{I|L}PR[QT]S{I|L};{[CP]|[EA]}{I|L}PR{[DS]|[MA]|[CV]|TT}N{I|L};{[CP]|[EA]}{I|L}PGR[VS]W;{[CP]|[EA]}{I|L}PR{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}G{I|L} 4.238;4.0696;4.0202;3.9479;3.7741;3.3843;3.347;3.3295;3.3131;3.2106 -;-;-;-;-;-;-;-;-;- 556 + 1 1.997 165018.1 0.4000000059604645 4449 3535 7982 DOHH2_400M_050219_2,7986 DOHH2_400M_050219_2,7986,AEIPVGICR False False AELPGVSRW 44.344254 507.771868884563 3838406.25 7982.0 nc|ENSG00000167397|Q9BQB6-2|VKORC1;;nc|ENSG00000167397|Q9BQB6-3|VKORC1 5.352627595265706 2.0 False 9.0 True nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 7987 44.358 800.0 162890.0 25 0 14904.0 + 14274 IEHGIITNW 9 144 541.7851096152443 1081.5556662972886 2 541.7853881716728 MULTI CID FTMS 0 0 0 7982 188130.609375 0.0522668181097423 12 -0.8531990051269531 5 Unmodified _IEHGIITNW_ ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF 54.773552608820026 0.0299037012502309 2 {I|L}G{I|L}VTNW 7 3 60.033 0.0 0.0 5.5506 0.0 0.0 280.11750991035314 0.0 280.11750991035314 0.0 31.44043919409096 0.0 0.0 0 0.805462187404089 0.0 0.8252574989159953 0.3494850021680094 {I|L}G{I|L}VTNW 5.5506 - 818 1 1.997 104995.0 0.6499999761581421 4450 3535 7982 DOHH2_400M_050219_2,7987 DOHH2_400M_050219_2,7987,IEHGIITNW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7988 44.371 716.0 154540.0 25 0 10711.0 + 13817 HTLLYEIY 8 127 526.2742765670639 1050.5340002009275 2 526.2751342654228 MULTI CID FTMS 0 0 0 7982 119300.09375 0.3226037420855416 4 -0.3189163208007812 6 Unmodified _HTLLYEIY_ REV__ENSG00000146918|ENST00000356309|NCAPG2;REV__ENST00000432615.5_1_7:158447451-158457424:-|nuORF;REV__ENST00000467785.5_1_7:158448006-158486027:-|nuORF;REV__nc|ENSG00000146918|Q86XI2-2|NCAPG2 30.22481116460888 0.4082965392918993 2 EEAKE{I|L}{I|L}G 8 -1 50.811 0.0 0.0 4.8367 0.0 0.0 0.0 178.0466054904456 178.0466054904456 20.860315625092323 0.0 0.0 0.0 0 0.8494850021680094 1.3010299956639813 0.8494850021680094 0.2887254899964357 EEAKE{I|L}{I|L}G 4.8367 - 679 1 1.997 88555.7 1.0 4451 3535 7982 DOHH2_400M_050219_2,7988 DOHH2_400M_050219_2,7988,HTLLYEIY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7989 44.384 800.0 43332.0 25 0 1842.9 + 773 AESDFASTF 9 68 974.4109650268176 973.4036885602176 1 974.1231567263604 MULTI CID FTMS 0 0 0 -1 0 7 Unmodified _AESDFASTF_ ENSG00000111652|ENST00000543155|COPS7A 34.10243960390752 0.1078313939113124 2 MAEAST{M(Oxidation (M))|F} 7 4 58.989 0.0 0.0 6.0601 0.0 0.0 218.09297377754064 0.0 218.09297377754064 0.0 48.05925402426212 0.0 0.0 0 0.0 0.0 1.566901560044258 0.0 MAEAST{M(Oxidation (M))|F} 6.0601 - 159 1 1.997 33663.4 0.6800000071525574 4452 3535 7982 DOHH2_400M_050219_2,7989 DOHH2_400M_050219_2,7989,AESDFASTF True False AESDFASTF 44.384366 974.12315672636 893061.625 7982.0 ENSG00000111652|ENST00000543155|COPS7A 4.23365044593811 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7990 44.398 800.0 122960.0 25 0 3379.5 + -1 CIFLCCCFREK 11 67 768.3349492231197 0 768.3358032107353 PEAK CID FTMS 0 0 0 7982 100438.8125 1.0 0 0.0 8 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))IFLC(Carbamidomethyl (C))C(Carbamidomethyl (C))CFREK_ REV__ENST00000296027.4_1_4:74863223-74863334:-|nuORF 0.3506318815782774 0.47618401536486 2 H 1 -1 0.71334 0.0 0.0 0.046482 0.0 0.0 932.6977782296392 461.8772371881469 1394.5750154177863 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.046482 - 1 + 1 1.997 72023.5 0.6299999952316284 4453 3535 7982 DOHH2_400M_050219_2,7990 DOHH2_400M_050219_2,7990,CIFLCCCFREK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7992 44.403 6.6 9462300.0 25 0 1296900.0 + 23345 LTDDGNKWLY 10 80 612.7984751321814 1223.5823973311626 2 612.7989379763603 MULTI CID FTMS 0 0 0 7991 7950406.0 0.9189259725612314 1 -0.0590057373046875 1 Unmodified _LTDDGNKWLY_ ENSG00000175166|ENST00000310118|PSMD2;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2 65.47368725323818 0.0222277162070287 2 [W{I|L}]WDD{I|L}T{I|L}Y 9 6 + 71.341 0.0 0.0 5.8305 5.8305 77.267 0.0 0.0 0.0 1.4709969530883882 1.4709969530883882 1.4709969530883882 1.4709969530883882 0 0.9247425010840048 1.6989700043360187 0.7302046884880937 0.0 [W{I|L}]WDD{I|L}T{I|L}Y;{I|L}TDD[NG]KW{I|L}Y;[W{I|L}]W{I|L}DDT{I|L}Y;[W{I|L}]WDDT{I|L}{I|L}Y;[W{I|L}]DDW{I|L}T{I|L}Y;[W{I|L}]DDWT{I|L}{I|L}Y;[W{I|L}]W{I|L}DSE{I|L}Y;[W{I|L}]WD{I|L}DT{I|L}Y;[{I|L}T]{[NV]|[RG]}[NG]DDT{I|L}Y;[W{I|L}]K[NG]DDT{I|L}Y 5.8305;5.7103;5.647;5.5845;5.5282;5.2822;5.2571;5.1549;4.9168;4.8152 -;+;-;-;-;-;-;-;-;- + 1044 1 1.995 55364.0 1.0 4454 3536 7991 DOHH2_400M_050219_2,7992 DOHH2_400M_050219_2,7992,LTDDGNKWLY True True LTDDGNKWLY 44.402862 612.79893797636 247747488.0 7991.0 ENST00000466987.1_1_3:184021130-184021370:+|nuORF;;ENSG00000175166|ENST00000310118|PSMD2;;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;;nc|ENSG00000175166|Q13200-3|PSMD2;;nc|ENSG00000175166|Q13200-2|PSMD2 7.896148840586345 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7993 44.405 90.0 779430.0 25 0 190610.0 + 23064 LSLLEAVTML 10 85 545.3162561026879 1088.6179592721758 2 545.3171264529228 MULTI CID FTMS 0 0 0 7991 680051.125 0.644608151547358 5 -0.43780517578125 2 Unmodified _LSLLEAVTML_ REV__ENSG00000054793|ENST00000338821|ATP9A;REV__nc|ENSG00000054793|O75110-2|ATP9A 3.5964929083625545 0.7100006075494749 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 9 1 1.995 61382.8 1.0 4455 3536 7991 DOHH2_400M_050219_2,7993 DOHH2_400M_050219_2,7993,LSLLEAVTML False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7994 44.409 223.0 341500.0 25 0 83869.0 + 40572 VKLLEGLT 8 74 436.7749283025414 871.5353036718828 2 436.7747985720634 MULTI CID FTMS 0 0 0 7991 320360.53125 0.5904827189605008 -1 0.0838127136230468 3 Unmodified _VKLLEGLT_ REV__ENST00000489597.1_1_2:231042247-231042924:-|nuORF 0.6903765706972694 0.8201419426409876 2 P 1 -1 1.9897 0.0 0.0 0.2283 0.0 0.0 651.4033131707095 120.05104242496328 771.4543555956727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.2283 - 3 + 1 1.995 64567.4 1.0 4456 3536 7991 DOHH2_400M_050219_2,7994 DOHH2_400M_050219_2,7994,VKLLEGLT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 7995 44.412 154.0 582740.0 25 0 60043.0 + + 19448 FLDDSIPNGVKY 12 121 684.3458889914671 1366.677225049734 2 684.3456909060478 MULTI CID FTMS 0 0 0 7991 304141.09375 0.6747679602570777 -1 0.0838127136230468 4 Unmodified _LFDDMEKTIKQ_ ENSG00000189233|ENST00000413272|NUGGC 18.373094154950223 0.6529654022026722 2 {M(Oxidation (M))|F}{I|L}DDS{I|L}[NP]RKY 11 -1 + 73.778 0.0 0.0 5.3984 5.3984 83.674 0.0 0.0 0.0 52.890177771410656 8.82464272976226 8.82464272976226 9.128498242811006 0 1.6549471895720984 0.0 0.4247425010840047 0.3252574989159953 {M(Oxidation (M))|F}{I|L}DDS{I|L}[NP]RKY;{M(Oxidation (M))|F}{I|L}DDS{I|L}[NP][VG]KY;[NP]KRY[W{M(Oxidation (M))|F}]D{I|L}E;{M(Oxidation (M))|F}{I|L}D[WE][NP]RKY;{M(Oxidation (M))|F}{I|L}D[W{M(Oxidation (M))|F}]YR[HA]{I|L} 5.3984;4.7304;3.5923;3.1439;2.7515 -;-;-;-;- 249 + 1 1.995 69679.3 1.0 4457 3536 7991 DOHH2_400M_050219_2,7995 DOHH2_400M_050219_2,7995,LFDDMEKTIKQ False False FLDDSIPNGVKY 44.412129 684.345690906048 7222899.5 7991.0 ENSG00000189233|ENST00000413272|NUGGC 8.067881107330322 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 7996 44.417 288.0 322740.0 25 0 24177.0 + 25421 NEDNGIIKAF 10 133 560.7854392647715 1119.556325596343 2 560.7851440310478 MULTI CID FTMS 0 0 0 7991 199821.046875 0.594083675810308 -1 0.0838127136230468 5 Unmodified _NEDNGIIKAF_ ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF 91.08480475639789 0.0092558408645064 2 {[QD]|[EN]|[WG]|[KD]|[RS]}DNG{I|L}{I|L}KA{M(Oxidation (M))|F} 10 0 + 62.366 0.0 0.0 5.5706 5.5706 84.781 0.0 0.0 0.0 29.495761560637185 15.026975159433531 15.026975159433531 9.164539485499256 0 2.0250722263572136 0.0 0.0 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}DNG{I|L}{I|L}KA{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}DGGG{I|L}{I|L}KA{M(Oxidation (M))|F} 5.5706;4.752 +;- + 392 + 1 1.995 69825.0 1.0 4458 3536 7991 DOHH2_400M_050219_2,7996 DOHH2_400M_050219_2,7996,NEDNGIIKAF True True NEDNGIIKAF 44.417418 560.785144031048 2063182.5 7991.0 ENSG00000174444|ENST00000307961|RPL4;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;;ENST00000422486.1_1_3:185135660-185136437:-|nuORF 7.594468275705974 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7997 44.424 369.0 278160.0 25 0 19341.0 + 5155 DIKKELQSL 9 128 537.3138854325997 1072.613217931999 2 537.3141967654228 MULTI CID FTMS 0 0 0 7991 143528.78125 1.0 0 0.0 6 Unmodified _DIKKELQSL_ ENSG00000165238|ENST00000427277|WNK2;nc|ENSG00000165238|Q9Y3S1-2|WNK2;nc|ENSG00000165238|Q9Y3S1-4|WNK2;nc|ENSG00000165238|Q9Y3S1|WNK2 43.9818466556824 0.0535980856389242 2 D{I|L}K 3 6 45.177 0.0 0.0 4.2119 0.0 0.0 0.0 713.3864265107779 713.3864265107779 16.17877506637881 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3494850021680094 + D{I|L}K 4.2119 + + 649 + 1 1.995 82738.4 1.0 4459 3536 7991 DOHH2_400M_050219_2,7997 DOHH2_400M_050219_2,7997,DIKKELQSL True True DIKKELQSL 44.424066 537.314196765423 862309.9375 7991.0 nc|ENSG00000165238|Q9Y3S1-4|WNK2;;ENSG00000165238|ENST00000427277|WNK2;;nc|ENSG00000165238|Q9Y3S1|WNK2;;nc|ENSG00000165238|Q9Y3S1-2|WNK2 4.067338784535726 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7998 44.438 800.0 251420.0 25 0 33202.0 + 6839 EEDFPSLREY 10 152 642.7898929410425 1283.5652329488848 2 642.7911254763603 MULTI CID FTMS 0 0 0 7991 125041.5703125 1.0 0 0.0 7 Unmodified _EEDFPSLREY_ ENSG00000020426|ENST00000261245|MNAT1;ENST00000556764.5_1_14:61201502-61275155:+|nuORF;nc|ENSG00000020426|P51948-2|MNAT1 43.9818466556824 0.1155196613165264 2 EED{M(Oxidation (M))|F}PS{I|L}{[RE]|[WV]}Y 10 0 + 59.377 0.0 0.0 4.6259 4.6259 75.99 0.0 0.0 0.0 39.602081283171295 5.630230424989833 5.630230424989833 4.259687322722812 0 0.75 1.6989700043360187 0.3807196863200844 0.4247425010840047 + + EED{M(Oxidation (M))|F}PS{I|L}{[RE]|[WV]}Y;EED{M(Oxidation (M))|F}PTV{[RE]|[WV]}Y;EED{M(Oxidation (M))|F}PS{I|L}[YV]W;EED{M(Oxidation (M))|F}PTV[YV]W;{[ET]|[MV]}[HV]{I|L}SP{M(Oxidation (M))|F}D[HC];EED{M(Oxidation (M))|F}[K{I|L}][C(Carbamidomethyl (C))Q]{[ES]|[DT]|[{I|L}C]};EED{M(Oxidation (M))|F}PS{I|L}[HV]DP;EE[YT][K{I|L}]{M(Oxidation (M))|F}D[HC];{[ET]|[MV]}[HV]VTP{M(Oxidation (M))|F}D[HC];EED{M(Oxidation (M))|F}PTV[HV]DP 4.6259;4.2941;3.985;3.6531;3.1359;3.1348;3.1141;2.9774;2.8041;2.7822 +;-;-;-;-;-;-;-;-;- + 594 + 1 1.995 150231.5 0.5600000023841858 4460 3536 7991 DOHH2_400M_050219_2,7998 DOHH2_400M_050219_2,7998,EEDFPSLREY True True EEDFPSLREY 44.437904 642.79112547636 695511.6875 7991.0 nc|ENSG00000020426|P51948-2|MNAT1;;ENST00000556764.5_1_14:61201502-61275155:+|nuORF;;ENSG00000020426|ENST00000261245|MNAT1 9.249382495880129 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 7999 44.44 107.0 614060.0 25 0 37723.0 -1 0 101 735.0512293283316 0 735.0494872927666 PEAK CID FTMS 0 0 0 7991 161359.71875 1.0 0 0.0 8 2 P 1 -1 6.9897 0.0 0.0 0.47611 0.0 0.0 1242.9394509888912 125.07259546451408 1368.0120464534052 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.47611 - 51 + 1 1.995 48236.9 1.0 4461 3536 7991 DOHH2_400M_050219_2,7999 DOHH2_400M_050219_2,7999, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8000 44.446 346.0 270550.0 25 0 22898.0 + 6744 EDNGIIKAF 9 113 503.7633783648213 1005.5122037964428 2 503.7637817263603 MULTI CID FTMS 0 0 0 7991 170390.328125 1.0 0 0.0 9 Unmodified _EDNGIIKAF_ ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF 46.020951573049366 0.0490941689151868 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NG{I|L}{I|L}KA{M(Oxidation (M))|F} 9 0 + 35.168 0.0 0.0 3.4975 3.4975 76.199 0.0 0.0 0.0 20.870827893812425 14.092568545288067 14.092568545288067 8.467874862246568 0 0.5044321917401079 0.0 0.0 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NG{I|L}{I|L}KA{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KA{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGG{I|L}{I|L}KA{M(Oxidation (M))|F} 3.4975;2.6553;2.5817 +;-;- + 253 + 1 1.995 74643.7 1.0 4462 3536 7991 DOHH2_400M_050219_2,8000 DOHH2_400M_050219_2,8000,EDNGIIKAF True True EDNGIIKAF 44.446435 503.76378172636 1092294.625 7991.0 ENSG00000174444|ENST00000307961|RPL4;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;;ENST00000422486.1_1_3:185135660-185136437:-|nuORF 6.14180850982666 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8001 44.457 611.0 221800.0 25 0 39975.0 + 38498 TSISLSTRLLS 11 139 589.3427806603354 1176.6710083874707 2 589.3434326052666 MULTI CID FTMS 0 0 0 7991 166633.109375 0.3415692987446978 -3 0.1587982177734375 10 Unmodified _TSISLSTRLLS_ REV__nc|ENSG00000100150|O75140-5|DEPDC5 2.498486711656943 0.8633599123570009 2 Y 1 -1 10.278 0.0 0.0 0.87345 0.0 0.0 995.5960094634456 0.0 995.5960094634456 0.0 6.29818655252878 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.87345 - 181 + 1 1.995 105247.4 1.0 4463 3536 7991 DOHH2_400M_050219_2,8001 DOHH2_400M_050219_2,8001,TSISLSTRLLS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8003 44.473 800.0 118340.0 25 0 7340.5 -1 0 111 963.4511453170284 2887.3316065512854 3 964.1192504763604 MULTI CID FTMS 0 0 0 8002 124370.375 1.0 0 0.0 1 2 [MN][KA]SA{[ET]|[MV]}{I|L}T{I|L}{M(Oxidation (M))|F} 12 -1 33.113 0.0 0.0 1.1468 0.0 0.0 0.0 1577.6958392995855 1577.6958392995855 14.93501263708417 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.6549471895720985 [MN][KA]SA{[ET]|[MV]}{I|L}T{I|L}{M(Oxidation (M))|F} 1.1468 - 1251 1 1.995 71850.3 0.6100000143051147 4464 3537 8002 DOHH2_400M_050219_2,8003 DOHH2_400M_050219_2,8003, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8004 44.478 221.0 242570.0 25 0 13524.0 + 9291 FIDHDITSQLY 11 85 676.3302493759799 1350.6459458187596 2 676.3290893435478 MULTI CID FTMS 0 0 0 8002 178069.90625 0.570543326297459 -1 0.0590057373046875 2 Unmodified _FIDHDITSQLY_ ENSG00000156787|ENST00000287380|TBC1D31;ENST00000524307.5_1_8:124089445-124141439:+|nuORF;nc|ENSG00000156787|Q96DN5-2|TBC1D31;nc|ENSG00000156787|Q96DN5-3|TBC1D31 49.55428908609986 0.1200983873401432 2 [HD]D{I|L}{M(Oxidation (M))|F}{I|L}TSQ{I|L}Y 11 4 + 81.478 0.0 0.0 6.0325 6.0325 86.245 0.0 0.0 0.0 4.35728569561438 51.75373472475883 4.35728569561438 9.128498242811006 0 1.0 0.0 1.579689690656103 0.0 [HD]D{I|L}{M(Oxidation (M))|F}{I|L}TSQ{I|L}Y;[HD]D{I|L}{M(Oxidation (M))|F}{I|L}TS[AG]{I|L}Y;[HD]D{I|L}{M(Oxidation (M))|F}T{I|L}SQ{I|L}Y;{[QS]|[NT]}[HQ]{M(Oxidation (M))|F}{I|L}TSQ{I|L}Y;[HD]D{I|L}T{M(Oxidation (M))|F}{I|L}SQ{I|L}Y;[HD]D{I|L}T{I|L}{M(Oxidation (M))|F}SQ{I|L}Y;[HD]D{I|L}{M(Oxidation (M))|F}T{I|L}S[AG]{I|L}Y;{[QS]|[NT]}[HQ]{M(Oxidation (M))|F}{I|L}TS[AG]{I|L}Y;{[QS]|[NT]}[HQ]{M(Oxidation (M))|F}T{I|L}SQ{I|L}Y;[HD]D{I|L}T{I|L}{M(Oxidation (M))|F}S[AG]{I|L}Y 6.0325;5.3566;5.3446;5.3308;4.9913;4.9913;4.6687;4.655;4.6429;4.3154 -;-;-;-;-;-;-;-;-;- 958 1 1.995 49077.1 1.0 4465 3537 8002 DOHH2_400M_050219_2,8004 DOHH2_400M_050219_2,8004,FIDHDITSQLY True True FIDHDITSQLY 44.477653 676.329089343548 1938965.875 8002.0 ENST00000524307.5_1_8:124089445-124141439:+|nuORF;;nc|ENSG00000156787|Q96DN5-3|TBC1D31;;ENSG00000156787|ENST00000287380|TBC1D31;;nc|ENSG00000156787|Q96DN5-2|TBC1D31 8.855234146118164 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8005 44.491 800.0 82556.0 25 0 6523.8 + -1 TEQSQIKGYVW 11 116 669.4374676130697 3342.150955732348 5 669.8395873904228 MULTI CID FTMS 0 0 0 8002 77835.3671875 1.0 0 0.0 3 ENSG00000205155|ENST00000587708|PSENEN 2 VW 2 -1 17.959 0.0 0.0 0.53734 0.0 0.0 3038.9925827848856 0.0 3038.9925827848856 0.0 3.5302283147456137 0.0 0.0 0 0.0 0.0 0.0 0.0 VW 0.53734 - 247 + 1 1.995 53266.9 0.5099999904632568 4466 3537 8002 DOHH2_400M_050219_2,8005 DOHH2_400M_050219_2,8005, False False TEQSQIKGYVW 44.491485 669.839587390423 423708.21875 8002.0 ENSG00000205155|ENST00000587708|PSENEN 7.635805606842041 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8006 44.505 800.0 159020.0 25 0 11904.0 + 542 AEIEETYANF 10 160 593.766938468044 1185.519324002888 2 593.7670165896416 MULTI CID FTMS 0 0 0 8002 80813.8203125 0.7758016392216821 -1 0.0590057373046875 4 Unmodified _AEIEETYANF_ ENSG00000119787|ENST00000378954|ATL2;ENST00000477642.5_1_2:38525261-38527422:-|nuORF;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2 49.93300154707207 0.0805441195901191 2 {[QN]|[E{I|L}]|[KN]}EAETY 7 5 26.672 0.0 0.0 2.2498 0.0 0.0 0.0 347.1344112433755 347.1344112433755 2.4717618943685657 0.0 0.0 0.0 0 0.0 0.721246399047171 1.174742501084005 0.0 {[QN]|[E{I|L}]|[KN]}EAETY 2.2498 - 1803 1 1.995 94183.8 0.449999988079071 4467 3537 8002 DOHH2_400M_050219_2,8006 DOHH2_400M_050219_2,8006,AEIEETYANF True True AEIEETYANF 44.505316 593.767016589642 825283.625 8002.0 ENST00000477642.5_1_2:38525261-38527422:-|nuORF;;nc|ENSG00000119787|Q8NHH9-2|ATL2;;ENSG00000119787|ENST00000378954|ATL2;;nc|ENSG00000119787|Q8NHH9-5|ATL2;;nc|ENSG00000119787|Q8NHH9-3|ATL2;;nc|ENSG00000119787|Q8NHH9-4|ATL2 6.885170618693034 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8007 44.519 800.0 205520.0 25 0 8969.7 -1 0 149 857.9305006712133 1713.8464484092265 2 858.4332763552666 MULTI CID FTMS 0 0 0 8002 76478.5234375 0.2111998918504778 -2 0.1428184509277343 5 2 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[RD]G{M(Oxidation (M))|F}{I|L}Q 15 -1 + 134.69 0.0 0.0 7.8587 7.8587 86.883 0.0 0.0 0.0 25.232002068356422 15.493466499992364 15.493466499992364 4.9168929071461775 0 2.4940840204505514 2.0 2.2104093769761874 2.2092096562557453 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGADQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NADQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[AG][RD]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGWQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW[AG][RD]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NWQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[KA]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDAN{I|L}[DP][HA] 7.8587;7.5718;7.3317;7.3317;7.3317;7.0437;7.0437;7.0437;6.5655;6.2851 -;-;-;-;-;-;-;-;-;- 12486 + 1 1.995 110927.1 0.5799999833106995 4468 3537 8002 DOHH2_400M_050219_2,8007 DOHH2_400M_050219_2,8007, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8008 44.533 800.0 77250.0 25 0 5271.4 19040 LDLRLTFGP 9 118 516.2968808474171 1030.5792087616342 2 516.2969238162041 MULTI CID FTMS 0 0 0 8002 128710.8125 1.0 0 0.0 6 Unmodified _LDLRLTFGP_ ENSG00000160867|ENST00000292408|FGFR4;ENST00000513423.1_1_5:176524254-176524674:+|nuORF;nc|ENSG00000160867|P22455-2|FGFR4 4.3292370932331545 0.7635526921153418 2 {I|L} 1 8 10.379 0.0 0.0 1.0071 0.0 0.0 899.484129271203 0.0 899.484129271203 0.0 0.4637702661844933 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0071 + + 76 + 1 1.995 49625.9 0.4900000095367431 4469 3537 8002 DOHH2_400M_050219_2,8008 DOHH2_400M_050219_2,8008,LDLRLTFGP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8009 44.548 800.0 269250.0 25 0 13156.0 13457 HLRVHTGERPY 11 190 682.865425637529 0 682.8682739138603 PEAK CID FTMS 0 0 0 8002 104652.7109375 1.0 0 0.0 7 Unmodified _HLRVHTGERPY_ ENSG00000083828|ENST00000396154|ZNF586;ENSG00000083828|ENST00000396154|ZNF586;ENSG00000083828|ENST00000396154|ZNF586;ENSG00000121417|ENST00000240731|ZNF211;ENSG00000165804|ENST00000360947|ZNF219;ENSG00000267508|ENST00000614994|ZNF285;ENST00000396150.4_1_19:58281140-58291161:+|nuORF;ENST00000396150.4_1_19:58281140-58291161:+|nuORF;ENST00000396150.4_1_19:58281140-58291161:+|nuORF;nc|ENSG00000083828|Q9NXT0-3|ZNF586;nc|ENSG00000083828|Q9NXT0-3|ZNF586;nc|ENSG00000083828|Q9NXT0-3|ZNF586;nc|ENSG00000121417|Q13398-2|ZNF211;nc|ENSG00000121417|Q13398-3|ZNF211;nc|ENSG00000121417|Q13398-4|ZNF211;nc|ENSG00000121417|Q13398-5|ZNF211;nc|ENSG00000121417|Q13398-6|ZNF211;nc|ENSG00000121417|Q13398-8|ZNF211;nc|ENSG00000121417|Q13398|ZNF211;nc|ENSG00000267508|Q96NJ3-2|ZNF285 5.296884461304476 0.47618401536486 2 P 1 10 6.9897 0.0 0.0 0.51255 0.0 0.0 1138.5681945594345 125.07254968814688 1263.640744247581 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.51255 + + 984 + 1 1.995 148219.6 0.5799999833106995 4470 3537 8002 DOHH2_400M_050219_2,8009 DOHH2_400M_050219_2,8009,HLRVHTGERPY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8011 44.565 800.0 97390.0 25 0 4252.7 -1 0 105 864.9101621910369 1727.8057714488737 2 865.4128295779228 MULTI CID FTMS 0 0 0 8010 94093.1484375 0.214638737029368 3 -0.2875900268554687 1 2 [MN]PN{I|L}NEAQ 9 -1 64.241 0.0 0.0 3.718 0.0 0.0 0.0 713.3434542291624 713.3434542291624 26.233006765553824 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.4247425010840047 0.805462187404089 [MN]PN{I|L}NEAQ 3.718 - 1429 + 1 1.995 56350.5 0.949999988079071 4471 3538 8010 DOHH2_400M_050219_2,8011 DOHH2_400M_050219_2,8011, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8012 44.567 94.0 1033900.0 25 0 133770.0 + 5315 DLDSRVLYY 9 77 572.2875708633626 1142.560588793525 2 572.2878295779228 MULTI CID FTMS 0 0 0 8010 543493.625 0.0756038186844753 -2 0.1502151489257812 2 Unmodified _DLDSRVLYY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 36.506200033944 0.094635877243972 2 {NN|[MP]|[D{I|L}]|[EV]}[QT]V{[QN]|[E{I|L}]|[KN]}YY 9 4 + 57.315 0.0 0.0 5.0163 5.0163 80.62 0.0 0.0 0.0 6.90344192233303 10.993624753846092 6.90344192233303 6.90344192233303 0 1.305462187404089 2.0 0.0 0.2887254899964357 {NN|[MP]|[D{I|L}]|[EV]}[QT]V{[QN]|[E{I|L}]|[KN]}YY;[Y{I|L}][Y{M(Oxidation (M))|F}]V{I|L}YY;{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}{I|L}YY;{NN|[MP]|[D{I|L}]|[EV]}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{I|L}{I|L}YY;{[TV]|[{I|L}S]}[RD]DV{I|L}YY;{[TV]|[{I|L}S]}[RV]DD{I|L}YY;[Y{I|L}][Y{M(Oxidation (M))|F}]VY{I|L}Y;{[TV]|[{I|L}S]}[RV]D{I|L}DYY;{[TV]|[{I|L}S]}[RD]DVY{I|L}Y;{[TV]|[{I|L}S]}[RD]VD{I|L}YY 5.0163;4.4121;4.3176;4.0542;4.0541;3.8863;3.711;3.3593;3.3531;3.2745 -;-;-;-;-;-;-;-;-;- 410 + 1 1.995 76669.5 1.0 4472 3538 8010 DOHH2_400M_050219_2,8012 DOHH2_400M_050219_2,8012,DLDSRVLYY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8013 44.572 313.0 265930.0 25 0 53163.0 34165 SLMIRQTI 8 89 481.2794730072653 960.5443930813308 2 481.2793151736259 MULTI CID FTMS 0 0 0 8010 182115.78125 1.0 0 0.0 3 Unmodified _SLMIRQTI_ ENSG00000148308|ENST00000372097|GTF3C5;ENST00000489842.1_1_9:135931263-135933364:+|nuORF;nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5 19.256988751693697 0.6264283240490721 2 {[TV]|[{I|L}S]}[KC]{I|L}{[RE]|[WV]}{I|L} 8 4 + 36.132 0.0 0.0 3.7616 3.7616 70.93 0.0 0.0 0.0 6.780061942764554 1.4266750356873104 1.4266750356873104 2.768024924119672 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}[KC]{I|L}{[RE]|[WV]}{I|L};{[TV]|[{I|L}S]}{I|L}[KC]{[RE]|[WV]}{I|L} 3.7616;3.4734 -;- 117 + 1 1.995 67944.9 1.0 4473 3538 8010 DOHH2_400M_050219_2,8013 DOHH2_400M_050219_2,8013,SLMIRQTI False True TVMGRIATL 44.572444 481.279315173626 752564.9375 8010.0 ENST00000485672.2_1_19:42488766-42489464:-|nuORF;;ENSG00000105409|ENST00000648268|ATP1A3;;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;;ENSG00000163399|ENST00000295598|ATP1A1;;nc|ENSG00000163399|P05023-2|ATP1A1;;nc|ENSG00000163399|P05023-4|ATP1A1;;nc|ENSG00000105409|P13637-3|ATP1A3;;ENSG00000018625|ENST00000361216|ATP1A2;;nc|ENSG00000163399|P05023-3|ATP1A1;;nc|ENSG00000105409|P13637-2|ATP1A3 -0.3967342774073283 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8014 44.58 414.0 196750.0 25 0 25052.0 + 17904 KQSRDGLPV 9 84 500.2833430220061 998.5521331108124 2 500.2830078005791 MULTI CID FTMS 0 0 0 8010 137025.671875 0.7285081149720659 1 -0.0848884582519531 4 Unmodified _KQSRDGLPV_ REV__ENST00000271375.6_1_1:168213838-168214108:+|nuORF 7.289230182591677 0.6602208344931196 2 E 1 -1 10.841 0.0 0.0 1.0857 0.0 0.0 499.2928468274407 367.1965120904906 866.4893589179313 0.0 0.0 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 E 1.0857 - 17 + 1 1.995 65621.3 1.0 4474 3538 8010 DOHH2_400M_050219_2,8014 DOHH2_400M_050219_2,8014,KQSRDGLPV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8015 44.594 800.0 149520.0 25 0 18816.0 + -1 VGSFMKKLRL 10 148 597.8564722118422 1193.6983914904845 2 597.8563720583916 MULTI CID FTMS 0 0 0 8010 114054.265625 0.6600204440269036 -2 0.1502151489257812 5 Oxidation (M) _VGSFM(Oxidation (M))KKLRL_ REV__ENST00000520784.2_1_8:55609260-55609404:+|nuORF 1.6526216038709556 0.7189921496796233 2 Y 1 -1 11.594 0.0 0.0 0.97125 0.0 0.0 1012.6238503301312 0.0 1012.6238503301312 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.97125 - 23 + 1 1.995 89801.8 0.5299999713897705 4475 3538 8010 DOHH2_400M_050219_2,8015 DOHH2_400M_050219_2,8015,VGSFMKKLRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8016 44.606 694.0 163080.0 25 0 19915.0 19266 LEKKGPRSE 9 131 522.2955107227056 1042.576468512211 2 522.2963744997978 MULTI CID FTMS 0 0 0 8010 115302.5 0.2533906993702248 10 -0.6435966491699219 6 Unmodified _LEKKGPRSE_ ENST00000453838.2_1_1:182929095-182929497:-|nuORF;ENST00000470335.1_1_22:20837987-20843498:-|nuORF 13.042465956692816 0.4836390050082244 2 {[QN]|[E{I|L}]|[KN]}K 3 6 14.481 0.0 0.0 1.3889 0.0 0.0 0.0 669.3329131745735 669.3329131745735 4.726934727215559 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + {[QN]|[E{I|L}]|[KN]}K 1.3889 + + 112 1 1.995 86740.0 1.0 4476 3538 8010 DOHH2_400M_050219_2,8016 DOHH2_400M_050219_2,8016,LEKKGPRSE False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8017 44.62 800.0 108960.0 25 0 18609.0 -1 0 92 959.1131914953642 2874.317745086292 3 959.7773315310478 MULTI CID FTMS 0 0 0 8010 245824.953125 0.2084603394747489 10 -0.6435966491699219 7 2 [NP]{I|L}DY 5 -1 23.456 0.0 0.0 0.81604 0.0 0.0 0.0 2269.029244986124 2269.029244986124 -1.6060561250048266 0.0 -1.6060561250048266 0.0 0 0.0 0.0 0.0 0.4247425010840047 [NP]{I|L}DY 0.81604 - 711 1 1.995 64857.0 0.8100000023841858 4477 3538 8010 DOHH2_400M_050219_2,8017 DOHH2_400M_050219_2,8017, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8018 44.633 800.0 127460.0 25 0 16591.0 + 32684 SDSDGPILY 9 72 966.4410509075864 965.4337744409864 1 966.4417602419852 MULTI CID FTMS 0 0 0 8010 103639.2734375 1.0 0 0.0 8 Unmodified _SDSDGPILY_ ENSG00000112419|ENST00000440869|PHACTR2;nc|ENSG00000112419|O75167-2|PHACTR2;nc|ENSG00000112419|O75167-5|PHACTR2;nc|ENSG00000112419|O75167|PHACTR2 36.04419817259434 0.0971720506436186 2 SGES{I|L}{I|L}Y 7 5 67.269 0.0 0.0 6.9677 0.0 0.0 198.06450087715 0.0 198.06450087715 0.0 25.057809497117844 0.0 0.0 0 0.7059771852360797 0.0 2.274227503252014 0.0 SGES{I|L}{I|L}Y 6.9677 - 251 1 1.995 74028.3 0.5299999713897705 4478 3538 8010 DOHH2_400M_050219_2,8018 DOHH2_400M_050219_2,8018,SDSDGPILY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8020 44.638 40.0 1465800.0 25 0 468530.0 + 18840 LASPHSPIL 9 67 467.7716192626435 933.5286855920872 2 467.7715331912041 MULTI CID FTMS 0 0 0 8019 2059810.25 0.4428023479285259 3 -0.2661933898925781 1 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 44.40701690623563 0.0526327925666318 2 [VP]TAH[PS]{I|L}{I|L} 9 4 + 39.196 0.0 0.0 4.1987 4.1987 69.58 0.0 0.0 0.0 0.5780301492854321 6.889086190737061 0.5780301492854321 0.5780301492854321 0 0.5 0.0 1.2134679910804405 0.0 [VP]TAH[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};[{I|L}A][PS]H[PS]{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}T[TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L};[VP]TAH{I|L}[PS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]{I|L}[PS]{I|L};[{I|L}A][PS]H{I|L}[PS]{I|L} 4.1987;4.1368;3.3462;3.3048;3.2787;3.0714;3.0095;2.2189 -;-;+;-;-;-;-;- + 216 1 1.995 51178.4 1.0 4479 3539 8019 DOHH2_400M_050219_2,8020 DOHH2_400M_050219_2,8020,LASPHSPIL True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8021 44.641 134.0 478290.0 25 0 105530.0 + 42462 VTGLGPRR 8 68 428.26194814577735 854.5093433583547 2 428.2616760134697 MULTI CID FTMS 0 0 0 8019 686128.0 0.6170430155453915 2 -0.2027015686035156 2 Unmodified _VTGLGPRR_ REV__ENSG00000134698|ENST00000373210|AGO4;REV__ENST00000252506.10_1_9:92221290-92221356:+|nuORF 0.6903765706972694 0.8201419426409876 2 H 1 -1 11.109 0.0 0.0 1.3001 0.0 0.0 699.4398070808141 0.0 699.4398070808141 0.0 11.020599913279623 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.3001 - 3 + 1 1.995 55186.8 1.0 4480 3539 8019 DOHH2_400M_050219_2,8021 DOHH2_400M_050219_2,8021,VTGLGPRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8022 44.646 309.0 464600.0 25 0 28983.0 + 7729 ELDPMAMTQKY 11 117 663.8069266612266 1325.5993003892531 2 663.8075439333916 MULTI CID FTMS 0 0 0 8019 335723.5625 0.2017941180271486 -2 0.1760978698730468 3 Unmodified _ELDPMAMTQKY_ ENSG00000087365|ENST00000322535|SF3B2;ENST00000534765.1_1_11:65835264-65836005:+|nuORF 84.5221896805406 0.0042935016478757 2 {[QN]|[E{I|L}]|[KN]}DPMAMTQKY 11 0 + 99.004 0.0 0.0 7.4686 7.4686 90.275 0.0 0.0 0.0 51.515230675649455 12.060323256818222 12.060323256818222 9.128498242811006 0 0.5994850021680094 2.0 0.7302046884880937 1.0994850021680094 + + {[QN]|[E{I|L}]|[KN]}DPMAMTQKY;{[QN]|[E{I|L}]|[KN]}DPMAMT[AG]KY;{[QN]|[E{I|L}]|[KN]}DPMA{[TV]|[{I|L}S]}C(Carbamidomethyl (C))KY;{[QN]|[E{I|L}]|[KN]}DPMAMTP[QP]P;{[QN]|[E{I|L}]|[KN]}DPMAM[KA]{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}DP[W{M(Oxidation (M))|F}]TQKY;{[QN]|[E{I|L}]|[KN]}DPMA{[TV]|[{I|L}S]}[CG]KY;{[QN]|[E{I|L}]|[KN]}DPMAR{[CA]|SS}{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}DP[W{M(Oxidation (M))|F}]T[AG]KY;{[QN]|[E{I|L}]|[KN]}D[{I|L}V][DC]TQKY 7.4686;6.78;5.825;5.5678;5.3837;5.2343;5.1363;4.9296;4.5429;4.0887 +;-;-;-;-;-;-;-;-;- + 2335 + 1 1.995 108494.2 1.0 4481 3539 8019 DOHH2_400M_050219_2,8022 DOHH2_400M_050219_2,8022,ELDPMAMTQKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8023 44.658 653.0 341280.0 25 0 35384.0 + 31948 RVDPIGPLSY 10 123 558.8060022513149 1115.5974515694295 2 558.8057739138603 MULTI CID FTMS 0 0 0 8019 280131.28125 0.7831123562819247 -1 0.0848884582519531 4 Unmodified _RVDPIGPLSY_ ENSG00000104093|ENST00000560891|DMXL2;nc|ENSG00000104093|Q8TDJ6-2|DMXL2;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;nc|ENSG00000104093|Q8TDJ6|DMXL2 100.7086487251713 0.0085662259466921 2 [RV]DP{I|L}GP{I|L}SY 10 0 + 97.668 0.0 0.0 8.7548 8.7548 96.664 0.0 0.0 0.0 15.265860596678593 66.85579523154988 15.265860596678593 18.895353934259475 0 2.305462187404089 0.721246399047171 1.024227503252014 0.555462187404089 + + [RV]DP{I|L}GP{I|L}SY;[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GP{I|L}SY;[PG]{I|L}[NP]G[KA]{I|L}SY;[{I|L}P]G[NP]G[KA]{I|L}SY;[{I|L}P]S[HT][KA]{I|L}SY;[PG]{I|L}[NP][KQ]{I|L}SY;[{I|L}P]G[NP][KQ]{I|L}SY;{[TV]|[{I|L}S]}P[HT][KA]{I|L}SY;[{I|L}P]S[RV]G[{I|L}P]DY;[{I|L}P]SG[RV][{I|L}P]DY 8.7548;7.061;5.1933;5.1333;4.9309;4.5833;4.5233;3.6668;3.6286;3.5165 +;-;-;-;-;-;-;-;-;- + 965 1 1.995 178036.4 1.0 4482 3539 8019 DOHH2_400M_050219_2,8023 DOHH2_400M_050219_2,8023,RVDPIGPLSY True True RVDPIGPLSY 44.657723 558.80577391386 2989491.75 8019.0 ENSG00000104093|ENST00000560891|DMXL2;;nc|ENSG00000104093|Q8TDJ6-2|DMXL2;;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;;nc|ENSG00000104093|Q8TDJ6|DMXL2 7.974452654520671 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8024 44.672 800.0 214480.0 25 0 27708.0 + + 2404 SEVMREVAW 9 148 553.8307808578033 1105.6470087824066 2 553.8305541872978 MULTI CID FTMS 0 0 0 8019 197289.96875 0.4720279181744773 11 -0.6060028076171875 5 Unmodified _AQPRTLHKR_ ENSG00000039123|ENST00000230640|MTREX 6.723162845929126 0.6799819581413107 2 VM{[RE]|[WV]}VAW 7 -1 19.429 0.0 0.0 1.7573 0.0 0.0 216.19642125562424 0.0 216.19642125562424 0.0 7.122213499699866 0.0 0.0 0 0.0 0.0 0.0 0.0 VM{[RE]|[WV]}VAW 1.7573 - 374 + 1 1.995 132125.1 0.6100000143051147 4483 3539 8019 DOHH2_400M_050219_2,8024 DOHH2_400M_050219_2,8024,AQPRTLHKR False False SEVMREVAW 44.671569 553.830554187298 823514.6875 8019.0 ENSG00000039123|ENST00000230640|MTREX 7.656385898590088 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8025 44.685 800.0 260050.0 25 0 25218.0 + 33115 SESRMVVTF 9 139 528.2622356318617 1054.5099183305233 2 528.2634765505791 MULTI CID FTMS 0 0 0 8019 181930.765625 0.5280928204202965 -1 0.0848884582519531 6 Unmodified _SESRMVVTF_ ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-5|GTF2I 99.7552728972412 0.0110101799492648 2 {[MG]|[TS]}[RD]MVVT{M(Oxidation (M))|F} 9 2 + 69.682 0.0 0.0 6.608 6.608 83.478 0.0 0.0 0.0 2.243012119929091 39.462279177277125 2.243012119929091 4.2609125905568135 0 1.305462187404089 0.0 0.9489700043360187 0.8263487002666079 {[MG]|[TS]}[RD]MVVT{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T][NP]MVVT{M(Oxidation (M))|F};[{I|L}T][MN]MVVT{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][WQ]VVT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[QP]TDT{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[KC]ESVT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[QP]EST{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[WQ]VE{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[TP]{[CT]|[{M(Oxidation (M))|F}G]}SVT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[QP]TSE{M(Oxidation (M))|F} 6.608;6.2039;5.3833;5.0708;5.0334;4.5098;4.4862;4.3853;4.3488;4.2738 -;-;-;-;-;-;-;-;-;- 1639 1 1.995 164750.5 0.5799999833106995 4484 3539 8019 DOHH2_400M_050219_2,8025 DOHH2_400M_050219_2,8025,SESRMVVTF True True SESRMVVTF 44.685402 528.263476550579 1846859.375 8019.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-5|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENSG00000263001|ENST00000573035|GTF2I 6.712975978851318 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8026 44.699 800.0 224940.0 25 0 84962.0 35934 SVPELLAP 8 122 413.2382112394951 824.4618695457903 2 413.2380859255791 MULTI CID FTMS 0 0 0 8019 121122.0078125 1.0 0 0.0 7 Unmodified _SVPELLAP_ ENSG00000070476|ENST00000389709|ZXDC;nc|ENSG00000070476|Q2QGD7-2|ZXDC;nc|ENSG00000070476|Q2QGD7-3|ZXDC 9.347437153973935 0.7675937258251505 2 E 1 7 9.2917 0.0 0.0 1.127 0.0 0.0 412.2593166854451 280.12800012760005 692.3873168130451 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.0 + E 1.127 + + 13 + 1 1.995 146472.7 0.4300000071525574 4485 3539 8019 DOHH2_400M_050219_2,8026 DOHH2_400M_050219_2,8026,SVPELLAP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8027 44.713 800.0 141360.0 25 0 12274.0 + 44429 YMIDPSGVSY 10 128 566.2546184599972 1130.4946839867944 2 566.2540771365166 MULTI CID FTMS 0 0 0 8019 118225.90625 1.0 0 0.0 8 Unmodified _YMIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 30.63653989081413 0.2803493085145199 2 [PS]GVDYM{I|L}SY 10 8 + 31.898 0.0 0.0 2.8216 2.8216 70.162 0.0 0.0 0.0 1.5043542130354304 7.716502347606582 1.5043542130354304 3.872161432802642 0 0.8182503180159344 0.3872161432802645 0.0 0.0 [PS]GVDYM{I|L}SY;{[QD]|[EN]|[WG]|[KD]|[RS]}PDYM{I|L}SY;[PS]GVYDM{I|L}SY;[VG]SPDYM{I|L}SY;[PS]GDVYM{I|L}SY;{[QD]|[EN]|[WG]|[KD]|[RS]}PYDM{I|L}SY;[VG]SPYDM{I|L}SY;[PS][RD]YM{I|L}SY;[HM]{I|L}MDE{[VA]|[{I|L}G]}W;{[MS]|[{M(Oxidation (M))|F}A]}[VG]EDM{I|L}SY 2.8216;2.4791;2.4696;2.3856;2.2438;2.127;2.0335;1.736;1.6898;1.5788 -;-;-;-;-;-;-;-;-;- 384 1 1.995 90526.9 0.4399999976158142 4486 3539 8019 DOHH2_400M_050219_2,8027 DOHH2_400M_050219_2,8027,YMIDPSGVSY False True YMIDPSGVSY 44.713052 566.254077136517 849904.625 8019.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 5.299131075541179 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8028 44.728 800.0 105840.0 25 0 8173.8 -1 AEIPVGICR 9 116 507.7720365825523 1013.5295202319046 2 507.7723571658134 MULTI CID FTMS 0 0 0 8019 110506.3984375 0.3792190909027541 2 -0.2027015686035156 9 Carbamidomethyl (C) _AEIPVGIC(Carbamidomethyl (C))R_ ENSG00000198160|ENST00000401041|MIER1;nc|ENSG00000198160|Q8N108-13|MIER1;nc|ENSG00000198160|Q8N108-14|MIER1;nc|ENSG00000198160|Q8N108-15|MIER1;nc|ENSG00000198160|Q8N108-16|MIER1;nc|ENSG00000198160|Q8N108-17|MIER1;nc|ENSG00000198160|Q8N108-18|MIER1;nc|ENSG00000198160|Q8N108-19|MIER1;nc|ENSG00000198160|Q8N108|MIER1 24.020572477871973 0.2255576514309169 2 {[CP]|[EA]}{I|L}PR{[DS]|[MA]|[CV]|TT}N{I|L} 9 -1 + 40.498 0.0 0.0 3.9958 3.9958 68.824 0.0 0.0 0.0 27.399182048155097 3.626138210185772 3.626138210185772 0.5271944187438038 0 1.2302046884880935 0.0 0.0 0.555462187404089 {[CP]|[EA]}{I|L}PR{[DS]|[MA]|[CV]|TT}N{I|L};{[CP]|[EA]}{I|L}PR[C(Carbamidomethyl (C))R]{I|L};{[CP]|[EA]}{I|L}PGV[C(Carbamidomethyl (C))R]{I|L};{[CP]|[EA]}{I|L}PR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG];{[CP]|[EA]}{I|L}PGV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG];{[CP]|[EA]}{I|L}PR[PG]Q{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}PR{[DS]|[MA]|[CV]|TT}GG{I|L};{[CP]|[EA]}{I|L}PP{[NV]|[RG]}Q{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}PG[RP]Q{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}PR[PG][AG]{M(Oxidation (M))|F} 3.9958;3.9437;3.8151;3.5006;3.3774;3.3565;2.8406;2.619;2.5409;2.4479 -;-;-;-;-;-;-;-;-;- 311 + 1 1.995 69273.0 0.449999988079071 4487 3539 8019 DOHH2_400M_050219_2,8028 DOHH2_400M_050219_2,8028,AEIPVGICR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8029 44.732 213.0 327730.0 25 0 68411.0 + 5112 DIDIRPGLY 9 81 531.2836648951695 1060.552776857139 2 531.2844726443291 MULTI CID FTMS 0 0 0 8019 115649.9375 0.4698301422453165 -1 0.0848884582519531 10 Unmodified _DIDIRPGLY_ ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;ENST00000484312.1_1_3:179298984-179304429:+|nuORF;nc|ENSG00000136518|O96019-2|ACTL6A 43.77239144664712 0.0547478964384323 2 {NN|[MP]|[D{I|L}]|[EV]}D{I|L}R[PG]{I|L}Y 9 0 + 68.35 0.0 0.0 6.4448 6.4448 88.812 0.0 0.0 0.0 44.43574972449312 12.636824930454011 12.636824930454011 9.208187539523747 0 2.1237125054200234 2.0 0.0 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}D{I|L}R[PG]{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}D{I|L}[VG][PG]{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}R{NN|[MP]|[D{I|L}]|[EV]}[PG]{I|L}Y;[R{I|L}]D{NN|[MP]|[D{I|L}]|[EV]}[PG]{I|L}Y;[PG]{I|L}{NN|[MP]|[D{I|L}]|[EV]}RD{I|L}Y;[PG]{I|L}{NN|[MP]|[D{I|L}]|[EV]}[VG]D{I|L}Y 6.4448;5.5765;3.8788;1.5099;0.90077;0.032525 +;-;-;-;-;- + 89 + 1 1.995 59991.1 1.0 4488 3539 8019 DOHH2_400M_050219_2,8029 DOHH2_400M_050219_2,8029,DIDIRPGLY True True DIDIRPGLY 44.732389 531.284472644329 1829068.75 8019.0 ENST00000484312.1_1_3:179298984-179304429:+|nuORF;;ENSG00000136518|ENST00000429709|ACTL6A;;nc|ENSG00000136518|O96019-2|ACTL6A;;ENSG00000077080|ENST00000160382|ACTL6B 5.46002991994222 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8031 44.738 64.0 632130.0 25 0 75866.0 + 23346 LTDDGNKWLY 10 75 612.7984751321814 1223.5823973311626 2 612.7985107302666 MULTI CID FTMS 0 0 0 8030 594569.8125 0.0687217285767684 5 -0.3210372924804687 1 Unmodified _LTDDGNKWLY_ ENSG00000175166|ENST00000310118|PSMD2;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2 45.739877483867886 0.1051543674217965 2 {[QN]|[E{I|L}]|[KN]}SRDD{I|L}T{I|L}Y 10 7 + 57.241 0.0 0.0 4.6781 4.6781 70.883 0.0 0.0 0.0 0.3785594722705809 15.026975159433531 0.3785594722705809 0.3785594722705809 0 1.1677353201839438 1.5228787452803376 0.7614393726401688 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}SRDD{I|L}T{I|L}Y;[{I|L}T]DD[W{I|L}]W{I|L}Y;{[QN]|[E{I|L}]|[KN]}SR{I|L}DDT{I|L}Y 4.6781;4.6472;4.121 -;-;- 74 1 1.995 35108.2 1.0 4489 3540 8030 DOHH2_400M_050219_2,8031 DOHH2_400M_050219_2,8031,LTDDGNKWLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8032 44.74 117.0 397300.0 25 0 83932.0 + -1 WQLTMKKKV 9 73 589.3427806603354 1176.6710083874707 2 589.3428222537041 MULTI CID FTMS 0 0 0 8030 430014.78125 0.8814565594576461 1 -0.1034812927246093 2 Oxidation (M) _WQLTM(Oxidation (M))KKKV_ REV__ENST00000466094.5_1_7:107220736-107227893:+|nuORF;REV__ENST00000486326.5_1_7:107220736-107234551:+|nuORF 0.6014990680409731 0.8936861360942873 2 H 1 -1 10.379 0.0 0.0 0.88203 0.0 0.0 1021.6033794585628 0.0 1021.6033794585628 0.0 10.37860356969059 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.88203 - 1 + 1 1.995 39494.8 1.0 4490 3540 8030 DOHH2_400M_050219_2,8032 DOHH2_400M_050219_2,8032,WQLTMKKKV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8033 44.744 185.0 516520.0 25 0 40833.0 -1 0 98 722.6896661167896 2165.0471689505684 3 722.6900512576103 MULTI CID FTMS 0 0 0 8030 470748.46875 0.5318125107676144 -2 0.1841087341308593 3 2 {[QS]|[NT]}{[NV]|[RG]}QSQAGMTG 12 -1 61.684 0.0 0.0 2.8491 0.0 0.0 0.0 973.4908433455902 973.4908433455902 40.71510327638123 0.0 0.0 0.0 0 2.0 0.0 1.1421590589602533 0.3252574989159953 {[QS]|[NT]}{[NV]|[RG]}QSQAGMTG 2.8491 - 2403 1 1.995 79175.2 1.0 4491 3540 8030 DOHH2_400M_050219_2,8033 DOHH2_400M_050219_2,8033, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8034 44.747 150.0 330330.0 25 0 74689.0 -1 WQKILMVR 8 70 545.3162561026879 1088.6179592721758 2 545.3169433474541 MULTI CID FTMS 0 0 0 8030 423773.5 0.4016872297796056 9 -0.4940376281738281 4 Oxidation (M) _WQKILM(Oxidation (M))VR_ ENSG00000198793|ENST00000361445|MTOR;ENST00000495435.1_1_1:11193031-11204809:-|nuORF 0.7936320650641473 0.8195151834710337 2 {I|L} 1 -1 8.6759 0.0 0.0 0.79697 0.0 0.0 957.5227119350648 0.0 957.5227119350648 0.0 8.675910884952316 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.79697 + + 3 + 1 1.995 42469.2 1.0 4492 3540 8030 DOHH2_400M_050219_2,8034 DOHH2_400M_050219_2,8034,WQKILMVR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8035 44.75 132.0 474200.0 25 0 39583.0 + 38057 TPFIRPVM 8 93 480.76912251533145 959.5236920974628 2 480.7704345583916 MULTI CID FTMS 0 0 0 8030 338449.25 1.0 0 0.0 5 Unmodified _TPFIRPVM_ ENSG00000205339|ENST00000379719|IPO7;ENST00000451446.1_1_13:24697062-24697869:-|nuORF 32.30548876998284 0.3644845974844379 2 TP{M(Oxidation (M))|F}{I|L}RE{M(Oxidation (M))|F} 7 2 72.695 0.0 0.0 7.5762 0.0 0.0 0.0 66.03570734195546 66.03570734195546 52.060544824331245 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.3494850021680094 0.0 TP{M(Oxidation (M))|F}{I|L}RE{M(Oxidation (M))|F} 7.5762 - 182 + 1 1.995 53149.9 1.0 4493 3540 8030 DOHH2_400M_050219_2,8035 DOHH2_400M_050219_2,8035,TPFIRPVM False True TPFIRPVM 44.749541 480.770434558392 2823841.0 8030.0 ENST00000451446.1_1_13:24697062-24697869:-|nuORF;;ENSG00000205339|ENST00000379719|IPO7 7.215821901957194 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8036 44.754 212.0 289610.0 25 0 55948.0 27205 PGKELKVLSY 10 84 567.3300059642745 1132.645458995349 2 567.3302490115166 MULTI CID FTMS 0 0 0 8030 247733.28125 0.1990417881385585 -7 0.4931221008300781 6 Unmodified _PGKELKVLSY_ ENSG00000164308|ENST00000437043|ERAP2;nc|ENSG00000164308|Q6P179-2|ERAP2;nc|ENSG00000164308|Q6P179-3|ERAP2;nc|ENSG00000164308|Q6P179-4|ERAP2 1.6526216038709556 0.7189921496796233 2 Y 1 9 11.594 0.0 0.0 1.0236 0.0 0.0 951.5708873174176 0.0 951.5708873174176 0.0 11.593793813122062 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.0236 + + 1 + 1 1.995 50713.5 1.0 4494 3540 8030 DOHH2_400M_050219_2,8036 DOHH2_400M_050219_2,8036,PGKELKVLSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8037 44.759 298.0 147940.0 25 0 28134.0 + 34304 SLRKRGGV 8 73 436.7749283025414 871.5353036718828 2 436.7747070193291 MULTI CID FTMS 0 0 0 8030 205092.6875 0.3780231206428189 3 -0.249359130859375 7 Unmodified _SLRKRGGV_ REV__ENST00000534751.2_1_11:45235120-45235297:+|nuORF 0.7936320650641473 0.8195151834710337 2 C 1 -1 3.0989 0.0 0.0 0.35557 0.0 0.0 349.3546528923891 416.1376436822876 765.4922965746766 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.35557 - 5 + 1 1.995 38874.8 1.0 4495 3540 8030 DOHH2_400M_050219_2,8037 DOHH2_400M_050219_2,8037,SLRKRGGV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8038 44.773 800.0 215200.0 25 0 21164.0 + 25560 NEVDPGDWQKF 11 130 667.8046622304998 1333.5947715277996 2 667.8049194216728 MULTI CID FTMS 0 0 0 8030 183592.796875 0.5824375479955816 -1 0.0992202758789062 8 Unmodified _NEVDPGDWQKF_ ENSG00000142207|ENST00000382751|URB1 104.48436234954404 0.0055741972225795 2 {[QD]|[EN]|[WG]|[KD]|[RS]}VDPGDWQK{M(Oxidation (M))|F} 11 0 + 74.026 0.0 0.0 5.5509 5.5509 82.323 0.0 0.0 0.0 36.73428634031186 10.810935890735209 10.810935890735209 6.6985700518116005 0 1.424742501084005 0.0 0.6861818737241735 1.1549471895720984 + + {[QD]|[EN]|[WG]|[KD]|[RS]}VDPGDWQK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VDPGDADQK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VDPGDW[AG]K{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VDPGDAD[AG]K{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VD{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[DS]|[MA]|[CV]|TT}K{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VDPG[HK][YE]{M(Oxidation (M))|F};[DP]GWQK{M(Oxidation (M))|F}D[WR];{[QD]|[EN]|[WG]|[KD]|[RS]}V{[HG]|PP}[CS]WQK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VD[RH]S[Y{M(Oxidation (M))|F}][PA];[DP]GWQKD{M(Oxidation (M))|F}[WR] 5.5509;5.0486;4.8664;4.3663;3.5672;3.419;2.3137;2.2636;2.1733;2.111 +;-;-;-;-;-;-;-;-;- + 3189 + 1 1.995 128788.0 0.6899999976158142 4496 3540 8030 DOHH2_400M_050219_2,8038 DOHH2_400M_050219_2,8038,NEVDPGDWQKF True True NEVDPGDWQKF 44.772854 667.804919421673 4755872.0 8030.0 ENSG00000142207|ENST00000382751|URB1 7.838423252105713 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8039 44.787 800.0 150010.0 25 0 14904.0 14383 IFDRDPDTLLY 11 131 684.3458889914671 1366.677225049734 2 684.3450805544853 MULTI CID FTMS 0 0 0 8030 145919.921875 0.3237381927921928 3 -0.249359130859375 9 Unmodified _IFDRDPDTLLY_ ENSG00000148572|ENST00000277746|NRBF2;ENST00000432731.2_1_1:111390701-111391313:-|nuORF;ENST00000520874.1_1_8:108995475-108995910:+|nuORF;nc|ENSG00000148572|Q96F24-3|NRBF2 21.53697664764585 0.586507868110548 2 {M(Oxidation (M))|F}{I|L}DDS{I|L}PNRKY 11 8 + 92.623 0.0 0.0 6.7772 6.7772 88.534 0.0 0.0 0.0 74.89730364141751 12.060323256818208 12.060323256818208 9.128498242810991 0 1.7689301784845295 0.0 0.4247425010840047 0.5796896906561032 {M(Oxidation (M))|F}{I|L}DDS{I|L}PNRKY;{M(Oxidation (M))|F}{I|L}DDS{I|L}PN[VG]KY;{M(Oxidation (M))|F}{I|L}DDS{I|L}PGGRKY;{M(Oxidation (M))|F}{I|L}DDS{I|L}PGG[VG]KY;{M(Oxidation (M))|F}{I|L}DDS{I|L}P{[RE]|[WV]}{I|L}Y;{[TV]|[{I|L}S]}[HK]NP{I|L}SDD{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YR]P{I|L}SDD{I|L}E;{M(Oxidation (M))|F}{I|L}DDS{I|L}P{[RE]|[WV]}Y{I|L};{M(Oxidation (M))|F}{I|L}D[{I|L}V]CPNRKY;{M(Oxidation (M))|F}{I|L}D[WE]PNRKY 6.7772;6.1093;6.1093;5.4436;5.185;5.1069;4.856;4.7869;4.6362;4.5956 -;-;-;-;-;-;-;-;-;- 970 + 1 1.995 91496.4 0.6100000143051147 4497 3540 8030 DOHH2_400M_050219_2,8039 DOHH2_400M_050219_2,8039,IFDRDPDTLLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8040 44.792 299.0 176270.0 25 0 14246.0 + 1433 ALDSHILDY 9 100 523.7619556745005 1045.509358415801 2 523.7612792849541 MULTI CID FTMS 0 0 0 8030 136319.84375 1.0 0 0.0 10 Unmodified _ALDSHILDY_ ENSG00000134077|ENST00000452837|THUMPD3 26.88365393820708 0.1891292719743517 2 [HS]D{I|L}{I|L}AVEY 9 7 + 48.338 0.0 0.0 4.6234 4.6234 74.353 0.0 0.0 0.0 2.147642715192504 29.71971276399756 2.147642715192504 3.0102999566398125 0 0.5 0.0 0.3494850021680094 0.0 [HS]D{I|L}{I|L}AVEY;[HS]D{I|L}{I|L}G{I|L}EY;[HS]D{I|L}{I|L}D[{I|L}A]Y;{NN|[MP]|[D{I|L}]|[EV]}[HS]{I|L}AVEY;{NN|[MP]|[D{I|L}]|[EV]}[HS]{I|L}G{I|L}EY;{[ES]|[DT]|[{I|L}C]}[HV]{I|L}AVEY;[HS]D{I|L}{I|L}DV[{M(Oxidation (M))|F}T];{[ES]|[DT]|[{I|L}C]}[HV]{I|L}G{I|L}EY;[{I|L}A][DN]H[WK]Y;{NN|[MP]|[D{I|L}]|[EV]}[HS]{I|L}D[{I|L}A]Y 4.6234;4.3355;3.2863;3.2837;2.9958;2.8763;2.8081;2.5884;2.3121;1.9466 -;-;-;-;-;-;-;-;-;- 308 1 1.995 45490.5 1.0 4498 3540 8030 DOHH2_400M_050219_2,8040 DOHH2_400M_050219_2,8040,ALDSHILDY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8041 44.806 800.0 203420.0 25 0 23500.0 17495 KPGRHSVRIT 10 177 575.843230799288 1149.671908665376 2 575.8430053591728 MULTI CID FTMS 0 0 0 8030 99817.03125 0.2070624136482294 -8 0.52606201171875 11 Unmodified _KPGRHSVRIT_ ENST00000585917.5_1_19:28284461-28284521:+|nuORF 3.2813086475875832 0.7114585191678878 2 YW 2 10 17.959 0.0 0.0 1.5621 0.0 0.0 782.518207303158 0.0 782.518207303158 0.0 6.538816891614747 0.0 0.0 0 0.0 0.0 0.0 0.0 YW 1.5621 - 304 + 1 1.995 125393.4 0.959999978542328 4499 3540 8030 DOHH2_400M_050219_2,8041 DOHH2_400M_050219_2,8041,KPGRHSVRIT False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8042 44.815 457.0 91894.0 25 0 5389.2 + 506 AEGVIVGHW 9 81 484.2532693515049 966.4919857698098 2 484.2534362673759 MULTI CID FTMS 0 0 0 8030 95040.25 1.0 0 0.0 12 Unmodified _AEGVIVGHW_ ENSG00000137642|ENST00000260197|SORL1 46.92087301778293 0.0471210510596396 2 {[CP]|[EA]}R{I|L}VGHW 8 2 + 49.418 0.0 0.0 5.1131 5.1131 79.031 0.0 0.0 0.0 33.93298474960609 13.399480616943508 13.399480616943508 5.327059689071518 0 0.7302046884880937 0.0 0.0 0.0 {[CP]|[EA]}R{I|L}VGHW;{[CP]|[EA]}GV{I|L}VGHW;{[CP]|[EA]}R{I|L}V[EP][PG];{[CP]|[EA]}R[R{I|L}]HW;{[CP]|[EA]}GV{I|L}V[EP][PG];{[CP]|[EA]}GV[R{I|L}]HW 5.1131;4.5619;3.1491;3.1327;2.6035;2.5745 -;+;-;-;-;- + 225 + 1 1.995 36179.3 1.0 4500 3540 8030 DOHH2_400M_050219_2,8042 DOHH2_400M_050219_2,8042,AEGVIVGHW True True AEGVIVGHW 44.81526 484.253436267376 776471.875 8030.0 ENSG00000137642|ENST00000260197|SORL1 7.78336763381958 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8043 44.822 376.0 251800.0 25 0 17245.0 -1 0 93 771.7008906227272 2312.080842468381 3 771.7008544802666 MULTI CID FTMS 0 0 0 8030 214283.234375 0.7926479548612151 -1 0.0992202758789062 13 2 [MT]GAQ{[QS]|[NT]}SQAGMTG 14 -1 70.141 0.0 0.0 3.0337 0.0 0.0 0.0 973.4934590590892 973.4934590590892 58.713913893108725 0.0 0.0 0.0 0 2.805462187404089 0.0 2.079689690656103 0.0 [MT]GAQ{[QS]|[NT]}SQAGMTG 3.0337 - 3337 1 1.995 75551.5 1.0 4501 3540 8030 DOHH2_400M_050219_2,8043 DOHH2_400M_050219_2,8043, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8044 44.836 800.0 196650.0 25 0 9522.5 + -1 RSEAPNWATQDSGFY 15 131 864.8856630806647 1727.7567732281293 2 865.3847534060478 MULTI CID FTMS 0 0 0 8030 111005.9453125 1.0 0 0.0 14 ENST00000433978.1_1_6:74002913-74002997:+|nuORF;ENSG00000104408|ENST00000220849|EIF3E 2 {[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]AQAEN{I|L}NP 14 -1 87.645 0.0 0.0 5.0728 0.0 0.0 0.0 224.00017504428084 224.00017504428084 28.12287684201517 0.0 0.0 0.0 0 0.0 2.0 1.079689690656103 1.6016784832448856 {[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]AQAEN{I|L}NP 5.0728 - 40410 1 1.995 107249.3 0.4699999988079071 4502 3540 8030 DOHH2_400M_050219_2,8044 DOHH2_400M_050219_2,8044, False False RSEAPNWATQDSGFY 44.835882 865.384753406048 1448871.75 8030.0 ENST00000433978.1_1_6:74002913-74002997:+|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 2.5184760689735413 2.0 False 15.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8046 44.841 10.0 4961400.0 25 0 631360.0 + 5316 DLDSRVLYY 9 56 572.2875708633626 1142.560588793525 2 572.2880737185478 MULTI CID FTMS 0 0 0 8045 4755969.0 0.6615890258970112 1 -0.0634918212890625 1 Unmodified _DLDSRVLYY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 24.99096001346401 0.2132109383330889 2 {NN|[MP]|[D{I|L}]|[EV]}[QT]V{[QN]|[E{I|L}]|[KN]}YY 9 4 + 54.427 0.0 0.0 4.7636 4.7636 76.277 0.0 0.0 0.0 42.12021525989542 14.09256854528806 14.09256854528806 4.016187022368669 0 1.305462187404089 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[QT]V{[QN]|[E{I|L}]|[KN]}YY;[Y{I|L}][Y{M(Oxidation (M))|F}]V{I|L}YY;{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}{I|L}YY 4.7636;4.4121;4.3176 -;-;- 74 + 1 1.995 44085.0 1.0 4503 3541 8045 DOHH2_400M_050219_2,8046 DOHH2_400M_050219_2,8046,DLDSRVLYY False True DLDSRVLYY 44.840668 572.288073718548 137230176.0 8045.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 7.844107151031494 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8047 44.844 148.0 337550.0 25 0 22624.0 -1 0 51 857.9305006712133 1713.8464484092265 2 857.9291259646416 MULTI CID FTMS 0 0 0 8045 317155.34375 0.6954322258280251 2 -0.1458778381347656 2 2 {[QV]|[N{I|L}]|[RA]|[KV]}NP{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 15 -1 + 104.05 0.0 0.0 6.0712 6.0712 82.08 0.0 0.0 0.0 79.5872875024979 4.6560458488244905 4.6560458488244905 4.771212547196626 0 1.274227503252014 2.0 0.0 1.6237125054200234 {[QV]|[N{I|L}]|[RA]|[KV]}NP{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NP{I|L}NADQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NP{I|L}NWQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NP{I|L}NWQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PP{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PP{I|L}NADQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PP{I|L}NWQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PP{I|L}NWQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[WM]{I|L}PP{I|L}{I|L};[NP]{I|L}N{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[WM]{I|L}PP{I|L}{I|L} 6.0712;5.7928;5.6809;5.4025;4.2769;3.9985;3.8865;3.6081;3.1564;2.5472 -;-;-;-;-;-;-;-;-;- 737 + 1 1.995 40365.9 1.0 4504 3541 8045 DOHH2_400M_050219_2,8047 DOHH2_400M_050219_2,8047, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8048 44.848 236.0 231750.0 25 0 14647.0 + -1 CCRRRCRRHRR 11 71 864.9382423542687 1727.861931775337 2 864.9370605349541 MULTI CID FTMS 0 0 0 8045 179482.609375 0.907171017752912 -1 0.1034812927246093 3 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))RRRC(Carbamidomethyl (C))RRHRR_ REV__ENSG00000184560|ENST00000333870|SPEM2 0.0 0.8751479354844584 2 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQA{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 15 -1 + 98.4 0.0 0.0 5.6949 5.6949 79.526 0.0 0.0 0.0 66.71204671777453 7.129070689390957 7.129070689390957 3.602934034162999 0 1.3494850021680094 2.0 1.1307196863200843 0.6307196863200843 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQA{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNESWATQT{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}PGGESWATQT{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}PNES{[DA]|[EG]}ATQT{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}PNESWATQT{I|L}[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}PNESWAT[AG]T{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}PNESW{[WN]|[YH]}T{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}PNEA{[DS]|[MA]|[CV]|TT}ATQT{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}PNES[QT]EQT{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}PNEA{[WS]|[C(Carbamidomethyl (C)){I|L}]}TQT{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]} 5.6949;5.4864;4.9637;4.9637;4.9637;4.9637;4.6386;4.6152;4.5754;4.5031 -;-;-;-;-;-;-;-;-;- 2840 + 1 1.995 42279.0 1.0 4505 3541 8045 DOHH2_400M_050219_2,8048 DOHH2_400M_050219_2,8048,CCRRRCRRHRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8049 44.857 495.0 167090.0 25 0 17600.0 + 9604 FLLDKKIGV 9 91 516.8259995844263 1031.6374462356523 2 516.8264648318291 MULTI CID FTMS 0 0 0 8045 156933.28125 1.0 0 0.0 4 Unmodified _FLLDKKIGV_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 36.506200033944 0.094635877243972 2 {M(Oxidation (M))|F}{I|L}{I|L}DKK{I|L}GV 9 0 + 52.912 0.0 0.0 5.1289 5.1289 74.87 0.0 0.0 0.0 3.291138597099668 6.45806077782904 3.291138597099668 1.7731749024395782 0 1.048455006504028 0.0 0.4247425010840047 0.0 + + {M(Oxidation (M))|F}{I|L}{I|L}DKK{I|L}GV;{M(Oxidation (M))|F}{I|L}VEKK{I|L}GV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}K{I|L}{M(Oxidation (M))|F}{I|L}[VG];{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[VG];[TA]A{I|L}K{I|L}{M(Oxidation (M))|F}{I|L}[VG];[TA]AK{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[VG];KKD{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[VG];{[VA]|[{I|L}G]}[VS]K{I|L}{M(Oxidation (M))|F}{I|L}[VG] 5.1289;4.957;3.444;3.4205;2.9974;2.9739;2.8932;1.6478 +;-;-;-;-;-;-;- + 425 + 1 1.995 67076.3 1.0 4506 3541 8045 DOHH2_400M_050219_2,8049 DOHH2_400M_050219_2,8049,FLLDKKIGV True True FLLDKKIGV 44.856843 516.826464831829 899443.0 8045.0 nc|ENSG00000166226|P78371-2|CCT2;;ENSG00000166226|ENST00000299300|CCT2 4.720591068267822 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8050 44.871 800.0 105540.0 25 0 15299.0 15655 IQLLEALPGLQ 11 116 597.8564722118422 1193.6983914904845 2 597.8565551638603 MULTI CID FTMS 0 0 0 8045 129666.390625 0.7503662247676538 1 -0.0634918212890625 5 Unmodified _IQLLEALPGLQ_ ENST00000259608.7_1_9:35650062-35650556:-|nuORF;ENST00000474403.1_1_9:35650065-35650895:-|nuORF 2.498486711656943 0.8633599123570009 2 Y 1 11 11.42 0.0 0.0 0.95669 0.0 0.0 1012.6242317998576 0.0 1012.6242317998576 0.0 11.419983281826005 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.95669 - 9 + 1 1.995 70826.1 0.5400000214576721 4507 3541 8045 DOHH2_400M_050219_2,8050 DOHH2_400M_050219_2,8050,IQLLEALPGLQ False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8051 44.881 585.0 129210.0 25 0 13212.0 + 778 AESEDLAVHLY 11 94 623.8014688844753 1245.5883848357505 2 623.8011962771416 MULTI CID FTMS 0 0 0 8045 118736.65625 0.9957553777815982 -1 0.1034812927246093 6 Unmodified _AESEDLAVHLY_ ENSG00000116191|ENST00000367635|RALGPS2;ENST00000478871.1_1_1:178863027-178885491:+|nuORF;ENST00000480743.1_1_1:178855116-178863183:+|nuORF;nc|ENSG00000116191|Q86X27-3|RALGPS2 68.08070601005525 0.0379666706128858 2 {[CP]|[EA]}SED{I|L}AVH{I|L}Y 11 0 + 62.899 0.0 0.0 5.0498 5.0498 87.274 0.0 0.0 0.0 14.763360818022058 10.186242207693716 10.186242207693716 19.30578591241531 0 0.7742275032520141 0.0 0.4247425010840047 0.0 + + {[CP]|[EA]}SED{I|L}AVH{I|L}Y;{[CP]|[EA]}SE[W{I|L}]VH{I|L}Y;{[WT]|[RM]}EKSV{NN|[MP]|[D{I|L}]|[EV]}D[PG];{[CP]|[EA]}V[HV]{I|L}EY{[WT]|[RM]};{[CP]|[EA]}V[HV]E{I|L}Y{[WT]|[RM]} 5.0498;3.4998;1.6605;0.99653;0.99653 +;-;-;-;- + 838 + 1 1.995 62543.0 1.0 4508 3541 8045 DOHH2_400M_050219_2,8051 DOHH2_400M_050219_2,8051,AESEDLAVHLY True True AESEDLAVHLY 44.88092 623.801196277142 1015362.8125 8045.0 ENSG00000116191|ENST00000367635|RALGPS2;;ENST00000478871.1_1_1:178863027-178885491:+|nuORF;;nc|ENSG00000116191|Q86X27-3|RALGPS2;;ENST00000480743.1_1_1:178855116-178863183:+|nuORF 8.478671073913574 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8052 44.895 800.0 194340.0 25 0 29773.0 + 39636 VDSQILYY 8 140 500.7529214327856 999.4912899323712 2 500.7523376345634 MULTI CID FTMS 0 0 0 8045 102874.7578125 0.260077431680334 -2 0.2027015686035156 7 Unmodified _VDSQILYY_ ENSG00000087111|ENST00000308360|PIGS;ENST00000484580.6_1_17:26883511-26887327:-|nuORF;nc|ENSG00000087111|Q96S52-2|PIGS 42.09456458481378 0.1992492688217789 2 {I|L}{I|L}DGTR 6 8 38.439 0.0 0.0 3.8458 0.0 0.0 0.0 341.1121144775462 341.1121144775462 11.19998100259714 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.7614393726401688 0.0 {I|L}{I|L}DGTR 3.8458 - 817 1 1.995 121322.7 0.8399999737739563 4509 3541 8045 DOHH2_400M_050219_2,8052 DOHH2_400M_050219_2,8052,VDSQILYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8053 44.899 248.0 226120.0 25 0 33314.0 -1 0 75 679.3670120884171 678.3597356218171 1 679.3664428591728 MULTI CID FTMS 0 0 0 8045 239651.03125 0.7322943992629725 1 -0.0634918212890625 8 2 [DV]VYA{I|L} 6 -1 + 61.577 0.0 0.0 9.0773 9.0773 88.047 0.0 0.0 0.0 16.962476687284877 16.197887582883936 16.197887582883936 4.815534464597704 0 1.0941876774005248 1.5228787452803376 0.0 0.0 [DV]VYA{I|L};[DV]VAY{I|L};[DV]V{M(Oxidation (M))|F}S{I|L};[DV]YVA{I|L};[DV]YAV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VDV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVV{I|L};[YV]ADV{I|L};[YV]DVA{I|L};[YV]DAV{I|L} 9.0773;8.3674;7.7395;7.1931;7.1866;6.5768;6.2497;6.0576;5.6204;5.6139 -;-;-;-;-;-;-;-;-;- 243 1 1.995 47173.6 1.0 4510 3541 8045 DOHH2_400M_050219_2,8053 DOHH2_400M_050219_2,8053, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8055 44.904 41.0 1110200.0 25 0 85188.0 + 7730 ELDPMAMTQKY 11 69 663.8069266612266 1325.5993003892531 2 663.8072387576103 MULTI CID FTMS 0 0 0 8054 1055261.875 0.6342886324915016 1 -0.0823860168457031 1 Unmodified _ELDPMAMTQKY_ ENSG00000087365|ENST00000322535|SF3B2;ENST00000534765.1_1_11:65835264-65836005:+|nuORF 46.0223103267499 0.1396584557920269 2 {[QN]|[E{I|L}]|[KN]}DPMAMTQKY 11 0 + 83.594 0.0 0.0 6.3061 6.3061 87.057 0.0 0.0 0.0 62.70358896566125 12.060323256818208 12.060323256818208 9.128498242810991 0 0.2614393726401688 2.0 0.0 0.7059771852360797 + + {[QN]|[E{I|L}]|[KN]}DPMAMTQKY;{[QN]|[E{I|L}]|[KN]}DPMAMT[AG]KY;{[QN]|[E{I|L}]|[KN]}DP[W{M(Oxidation (M))|F}]TQKY;{[QN]|[E{I|L}]|[KN]}DPMAM[KA]{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}DP[W{M(Oxidation (M))|F}]T[AG]KY;{[QN]|[E{I|L}]|[KN]}DPMAR{[CA]|SS}{[SA]|[TG]}Y;{NN|[MP]|[D{I|L}]|[EV]}AD[RV]AMPD[HS];{NN|[MP]|[D{I|L}]|[EV]}DA[RV]AMPD[HS];{NN|[MP]|[D{I|L}]|[EV]}AN[KQ]AMPD[HS];{[DS]|[MA]|[CV]|TT}PD[RV]AMPD[HS] 6.3061;5.6175;4.6227;4.2575;3.9313;3.8033;2.6159;2.3888;2.3888;2.2297 +;-;-;-;-;-;-;-;-;- + 415 + 1 1.995 38108.1 1.0 4511 3542 8054 DOHH2_400M_050219_2,8055 DOHH2_400M_050219_2,8055,ELDPMAMTQKY False True ELDPMAMTQKY 44.904432 663.80723875761 36397038.0 8054.0 ENST00000534765.1_1_11:65835264-65836005:+|nuORF;;ENSG00000087365|ENST00000322535|SF3B2 10.292588233947754 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8056 44.908 171.0 290770.0 25 0 64854.0 + 27337 PHSSPLALL 9 74 467.7716192626435 933.5286855920872 2 467.7717468142509 MULTI CID FTMS 0 0 0 8054 262703.28125 0.056473954213029 6 -0.2925148010253906 2 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 30.22481116460888 0.1466181017706357 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 9 4 + 40.92 0.0 0.0 4.3834 4.3834 84.086 0.0 0.0 0.0 5.642492736872597 28.93053421393809 5.642492736872597 16.707542976826023 0 0.9247425010840048 0.0 1.1549471895720984 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};[TA][VP]H[PS]{I|L}{I|L} 4.3834;2.5937 -;- 120 1 1.995 45169.6 1.0 4512 3542 8054 DOHH2_400M_050219_2,8056 DOHH2_400M_050219_2,8056,PHSSPLALL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8057 44.912 237.0 130770.0 25 0 11053.0 30953 RKRRSCKW 8 64 560.3218621726122 1118.6291714120243 2 560.3225585818291 MULTI CID FTMS 0 0 0 8054 207217.765625 0.6429808719311966 -1 0.0634918212890625 3 Unmodified _RKRRSCKW_ ENST00000557589.1_1_12:56815505-56817595:-|nuORF 2.302733041254933 0.8103549651115762 2 W 1 7 13.099 0.0 0.0 1.171 0.0 0.0 914.5395850856556 0.0 914.5395850856556 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 1.171 + + 3 + 1 1.995 29447.8 1.0 4513 3542 8054 DOHH2_400M_050219_2,8057 DOHH2_400M_050219_2,8057,RKRRSCKW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8058 44.926 800.0 119160.0 25 0 8013.0 + -1 TLDPYRNEVSQLY 13 102 799.3971134195922 1596.7796739059845 2 799.3972045779228 MULTI CID FTMS 0 0 0 8054 134585.0 1.0 0 0.0 4 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))YRQRFLYSLY_ ENSG00000023516|ENST00000025301|AKAP11 5.731851221503515 0.8481046878870278 2 [{I|L}T]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TA]SQNSQ{I|L}Y 14 -1 + 84.139 0.0 0.0 5.2693 5.2693 76.32 0.0 0.0 0.0 3.181277912325342 3.181277912325342 3.181277912325342 2.5578094971178444 0 1.6677353201839438 2.0 2.0356668758921828 0.3494850021680094 [{I|L}T]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TA]SQNSQ{I|L}Y;[{I|L}T]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}[CS]VSQ{I|L}Y;[{I|L}T][HA]SNQSV{NN|[MP]|[D{I|L}]|[EV]}H{I|L}Y;[{I|L}T]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{[C(Carbamidomethyl (C))E]|[WC]}SQ{I|L}Y;[{I|L}T]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V[CS]VSQ{I|L}Y;[{I|L}T]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[C(Carbamidomethyl (C))K]NSQ{I|L}Y;[{I|L}T]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}[CS]WQ{I|L}Y;[{I|L}T]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V{[C(Carbamidomethyl (C))E]|[WC]}SQ{I|L}Y;[{I|L}T]NEEV{I|L}[CS]VSQ{I|L}Y;[{I|L}T]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TA]SQNNT{I|L}Y 5.2693;5.1091;5.0701;4.9904;4.8599;4.849;4.7715;4.7411;4.7329;4.6263 -;-;-;-;-;-;-;-;-;- 3835 1 1.995 71107.7 0.5600000023841858 4514 3542 8054 DOHH2_400M_050219_2,8058 DOHH2_400M_050219_2,8058,MYRQRFLYSLY False False TLDPYRNEVSQLY 44.926067 799.397204577923 1011766.25 8054.0 ENSG00000023516|ENST00000025301|AKAP11 7.600107987721761 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8059 44.938 675.0 239760.0 25 0 91773.0 -1 0 40 1083.5305389990283 2165.046525064857 2 1084.032763659954 MULTI CID FTMS 0 0 0 8054 131489.453125 0.986950936652394 1 -0.0823860168457031 5 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 105235.6 1.0 4515 3542 8054 DOHH2_400M_050219_2,8059 DOHH2_400M_050219_2,8059, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8060 44.952 800.0 253740.0 25 0 41632.0 + 9456 FLDDFESKY 9 149 582.2665042201633 1162.5184555071264 2 582.2671996951103 MULTI CID FTMS 0 0 0 8054 104918.6328125 0.1552472917238313 -4 0.3510818481445312 6 Unmodified _FLDDFESKY_ ENSG00000171475|ENST00000323571|WIPF2;ENST00000494757.5_1_17:38375603-38434474:+|nuORF;nc|ENSG00000171475|Q8TF74-2|WIPF2 70.33199760932243 0.0209706178985989 2 {M(Oxidation (M))|F}{I|L}DD{M(Oxidation (M))|F}ESKY 9 0 + 88.982 0.0 0.0 7.6543 7.6543 87.005 0.0 0.0 0.0 13.46787486224656 5.495340330834338 5.495340330834338 5.495340330834338 0 1.110924374808178 0.0 1.055462187404089 0.5994850021680094 + + {M(Oxidation (M))|F}{I|L}DD{M(Oxidation (M))|F}ESKY;{M(Oxidation (M))|F}{I|L}DD{M(Oxidation (M))|F}ESYK;[KS][Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}DD{I|L}E;{M(Oxidation (M))|F}{I|L}DD{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[PG]E{M(Oxidation (M))|F}DD{I|L}E;{M(Oxidation (M))|F}{I|L}D[PA]EDDNK;{[ET]|[MV]}{M(Oxidation (M))|F}E{I|L}[PA]D{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}[PA]P{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}E;{[ES]|[DT]|[{I|L}C]}KN[DV]DD{I|L}E;{[ET]|[MV]}{M(Oxidation (M))|F}{I|L}E[PA]D{I|L}E 7.6543;7.1816;5.4328;5.2912;4.8986;3.8312;3.6078;3.3664;3.364;3.2841 +;-;-;-;-;-;-;-;-;- + 2846 + 1 1.995 152602.0 0.4799999892711639 4516 3542 8054 DOHH2_400M_050219_2,8060 DOHH2_400M_050219_2,8060,FLDDFESKY True True FLDDFESKY 44.951684 582.26719969511 4708735.5 8054.0 ENSG00000171475|ENST00000323571|WIPF2;;nc|ENSG00000171475|Q8TF74-2|WIPF2;;ENST00000494757.5_1_17:38375603-38434474:+|nuORF 8.10827668507894 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8061 44.955 180.0 444790.0 25 0 70989.0 + 33779 SLAVTPKRTD 10 89 544.3089661663242 1086.6033793994484 2 544.3091918826103 MULTI CID FTMS 0 0 0 8054 238457.171875 0.6070865178878442 -3 0.2661933898925781 7 Unmodified _SLAVTPKRTD_ REV__ENSG00000103091|ENST00000262144|WDR59;REV__nc|ENSG00000103091|Q6PJI9-2|WDR59 5.731851221503515 0.7001233259664787 2 Y 1 -1 10.596 0.0 0.0 0.97514 0.0 0.0 905.529021344564 0.0 905.529021344564 0.0 9.882594520752386 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.97514 - 8 + 1 1.995 66453.0 1.0 4517 3542 8054 DOHH2_400M_050219_2,8061 DOHH2_400M_050219_2,8061,SLAVTPKRTD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8062 44.967 665.0 160200.0 25 0 16236.0 + 42116 VRPGGRTL 8 122 428.26194814577735 854.5093433583547 2 428.2624389529228 MULTI CID FTMS 0 0 0 8054 160269.96875 0.1441326761462375 5 -0.2680892944335937 8 Unmodified _VRPGGRTL_ REV__ENST00000394321.9_1_19:7587636-7592563:+|nuORF 0.6903765706972694 0.8201419426409876 2 {I|L} 1 -1 8.9794 0.0 0.0 1.0508 0.0 0.0 723.4140502448766 0.0 723.4140502448766 0.0 8.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0508 + + 3 + 1 1.995 86491.6 1.0 4518 3542 8054 DOHH2_400M_050219_2,8062 DOHH2_400M_050219_2,8062,VRPGGRTL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8063 44.982 800.0 266550.0 25 0 27122.0 + 45241 YRTDMIQAL 9 153 555.7843591969125 1109.554165460625 2 555.7839843630791 MULTI CID FTMS 0 0 0 8054 145610.4375 0.2882446944835768 -4 0.3510818481445312 9 Unmodified _YRTDMIQAL_ ENSG00000174231|ENST00000304992|PRPF8;ENST00000572445.1_1_17:1564285-1564453:-|nuORF;ENST00000573681.1_1_17:1563133-1564615:-|nuORF 51.629811660486645 0.0367964933207742 2 [AG]{I|L}MYM{I|L}AGA{I|L} 11 7 + 71.412 0.0 0.0 6.4361 6.4361 78.592 0.0 0.0 0.0 0.9691001300805624 15.07062321345802 0.9691001300805624 0.9691001300805624 0 1.305462187404089 1.5228787452803376 0.0 0.0 [AG]{I|L}MYM{I|L}AGA{I|L};[{I|L}A]GMYM{I|L}AGA{I|L};[AG]{I|L}MYM{I|L}QA{I|L};[{I|L}A]GMYM{I|L}QA{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QYM{I|L}AGA{I|L};[YT][RD]M{I|L}AGA{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QYM{I|L}QA{I|L};[Q{I|L}]MYM{I|L}AGA{I|L};[YT][RD]M{I|L}QA{I|L};[Q{I|L}]MYM{I|L}QA{I|L} 6.4361;6.3487;6.2734;6.1861;6.0575;5.9179;5.8988;5.8053;5.7592;5.6466 -;-;-;-;-;-;-;-;-;- 6464 1 1.995 158943.0 0.550000011920929 4519 3542 8054 DOHH2_400M_050219_2,8063 DOHH2_400M_050219_2,8063,YRTDMIQAL True True YRTDMIQAL 44.981757 555.783984363079 7170673.5 8054.0 ENST00000573681.1_1_17:1563133-1564615:-|nuORF;;ENST00000572445.1_1_17:1564285-1564453:-|nuORF;;ENSG00000174231|ENST00000304992|PRPF8 6.111147403717041 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8065 44.992 347.0 198930.0 25 0 12283.0 5113 DIDIRPGLY 9 89 531.2836648951695 1060.552776857139 2 531.7842285037041 MULTI CID FTMS 0 0 0 8064 177958.15625 0.9892849458783752 2 -0.0716781616210937 1 Unmodified _DIDIRPGLY_ ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;ENST00000484312.1_1_3:179298984-179304429:+|nuORF;nc|ENSG00000136518|O96019-2|ACTL6A 14.838274106304384 0.4350285940865338 2 {NN|[MP]|[D{I|L}]|[EV]}D{I|L}R[PS]V{M(Oxidation (M))|F} 9 3 + 32.074 0.0 0.0 3.0243 3.0243 77.55 0.0 0.0 0.0 15.620149727660298 6.030768805449192 6.030768805449192 9.208187539523756 0 0.2742275032520141 1.5228787452803376 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}D{I|L}R[PS]V{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}[VG][PS]V{M(Oxidation (M))|F};{[QS]|[NT]}Q{I|L}R[PS]V{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}R{[TV]|[{I|L}S]}{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}R[Y{I|L}][PG];{[QS]|[NT]}[AG]{I|L}R[PS]V{M(Oxidation (M))|F};{[QS]|[NT]}Q{I|L}[VG][PS]V{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[HN]R[RP][PG];{NN|[MP]|[D{I|L}]|[EV]}[YR][HK]{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}[VG]{[TV]|[{I|L}S]}{[ET]|[MV]} 3.0243;2.156;1.7796;1.208;1.1649;0.91139;0.91139;0.71499;0.43115;0.33977 -;-;-;-;-;-;-;-;-;- 263 + 1 1.995 63159.5 1.0 4520 3543 8064 DOHH2_400M_050219_2,8065 DOHH2_400M_050219_2,8065,DIDIRPGLY False True SETPRINVF 44.991913 531.784228503704 2033056.125 8064.0 ENSG00000176715|ENST00000614302|ACSF3 2.4559284448623657 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8066 44.999 391.0 206090.0 25 0 15069.0 + 29993 QTDQMVFNAY 10 110 608.7687971612802 1215.5230413893603 2 608.7689086794853 MULTI CID FTMS 0 0 0 8064 191207.390625 0.8137831453622877 -1 0.0823860168457031 2 Unmodified _QTDQMVFNAY_ ENSG00000147457|ENST00000397677|CHMP7;ENST00000517325.5_1_8:23104188-23118109:+|nuORF;ENST00000523091.5_1_8:23112705-23118098:+|nuORF 76.82478488871298 0.0187167883027705 2 [QA]ANEVMQYY 10 7 + 61.481 0.0 0.0 5.058 5.058 79.821 0.0 0.0 0.0 36.95529882148689 5.105698298707914 5.105698298707914 6.189093046596298 0 0.2887254899964357 0.0 0.0 1.0 [QA]ANEVMQYY;[QA]ANEVMQD[NP];[QA]ANEVQMYY;[QA]AGGEVMQYY;[TP]WEVMQYY;[QA]ANEQVMYY;[QA]AGGEVMQD[NP];[QA]ANEVM[AG]D[NP];[QA]AN{M(Oxidation (M))|F}[NG]{M(Oxidation (M))|F}NAY;[QA]ANEVQMD[NP] 5.058;4.5488;4.4641;4.304;4.1281;3.8051;3.7978;3.7978;3.7615;3.7174 -;-;-;-;-;-;-;-;-;- 2559 + 1 1.995 63127.4 1.0 4521 3543 8064 DOHH2_400M_050219_2,8066 DOHH2_400M_050219_2,8066,QTDQMVFNAY True True QTDQMVFNAY 44.998931 608.768908679485 1764679.625 8064.0 ENST00000523091.5_1_8:23112705-23118098:+|nuORF;;ENSG00000147457|ENST00000397677|CHMP7;;ENST00000517325.5_1_8:23104188-23118109:+|nuORF 9.067438125610352 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8067 45.008 508.0 174290.0 25 0 26631.0 + 43573 YADNQVMHFY 10 110 644.2765991632095 1286.538645393219 2 644.2770873904228 MULTI CID FTMS 0 0 0 8064 149449.640625 0.8515903029515214 -1 0.0823860168457031 3 Unmodified _YADNQVMHFY_ ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF 75.76082778847304 0.0187510588500744 2 YADNVQMH{M(Oxidation (M))|F}Y 10 2 + 102.3 0.0 0.0 7.9514 7.9514 80.503 0.0 0.0 0.0 71.87464226430107 13.521825181113629 13.521825181113629 0.0443219174010778 0 1.5941876774005248 2.0 0.0 1.2302046884880935 YADNVQMH{M(Oxidation (M))|F}Y;YADNQVMH{M(Oxidation (M))|F}Y;YADGGVQMH{M(Oxidation (M))|F}Y;YADGGQVMH{M(Oxidation (M))|F}Y;YADNVHMQ{M(Oxidation (M))|F}Y;YADN[AG]VMH{M(Oxidation (M))|F}Y;YADNV[AG]MH{M(Oxidation (M))|F}Y;YADNVD{[HG]|PP}S{M(Oxidation (M))|F}Y;YADAAAQMH{M(Oxidation (M))|F}Y;YADNVHMAG{M(Oxidation (M))|F}Y 7.9514;7.9479;7.239;7.2356;7.0728;6.847;6.613;6.5336;6.5289;6.4899 -;+;-;-;-;-;-;-;-;- + 4783 + 1 1.995 69236.8 1.0 4522 3543 8064 DOHH2_400M_050219_2,8067 DOHH2_400M_050219_2,8067,YADNQVMHFY True True YADNQVMHFY 45.007896 644.277087390423 1419113.125 8064.0 ENSG00000177084|ENST00000320574|POLE;;ENST00000537064.5_1_12:133201285-133234573:-|nuORF 9.215768019358316 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8068 45.012 233.0 228780.0 25 0 18586.0 + 30322 RADQELLMY 9 85 569.7813901865863 1137.5482274399726 2 569.7817260622978 MULTI CID FTMS 0 0 0 8064 133897.75 0.8647722209860341 -1 0.0823860168457031 4 Unmodified _RADQELLMY_ ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000172354|P62879-2|GNB2 15.248480904072842 0.4239247793462406 2 {I|L}{I|L}MY 4 5 41.938 0.0 0.0 3.6867 0.0 0.0 599.2662831037125 0.0 599.2662831037125 0.0 30.96910013008056 0.0 0.0 0 1.0 0.0 0.0 0.0 + {I|L}{I|L}MY 3.6867 + + 26 1 1.995 45706.4 1.0 4523 3543 8064 DOHH2_400M_050219_2,8068 DOHH2_400M_050219_2,8068,RADQELLMY False True RADQELLMY 45.012271 569.781726062298 1182237.125 8064.0 ENSG00000172354|ENST00000303210|GNB2;;nc|ENSG00000172354|P62879-2|GNB2 5.864835262298584 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8070 45.017 55.0 815530.0 25 0 177030.0 30251 QWVRLLYR 8 69 567.3300059642745 1132.645458995349 2 567.3300659060478 MULTI CID FTMS 0 0 0 8069 1025069.875 0.82359439094124 -3 0.1764030456542968 1 Unmodified _QWVRLLYR_ ENSG00000142530|ENST00000600100|GARIN5A;nc|ENSG00000142530|Q6IPT2-2|GARIN5A 0.7936320650641473 0.8195151834710337 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 41632.6 1.0 4524 3544 8069 DOHH2_400M_050219_2,8070 DOHH2_400M_050219_2,8070,QWVRLLYR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8071 45.021 220.0 252870.0 25 0 24872.0 -1 0 70 722.6896661167896 2165.0471689505684 3 722.6897460818291 MULTI CID FTMS 0 0 0 8069 271073.9375 0.3062368140853105 2 -0.0621795654296875 2 2 GMTGYGM 7 -1 59.769 0.0 0.0 2.7606 0.0 0.0 842.4055196359185 622.368217814874 1464.7737374507924 0.0 0.0 0.0 0.0 0 2.2302046884880937 0.0 0.0 0.0 GMTGYGM 2.7606 - 356 + 1 1.995 50718.5 1.0 4525 3544 8069 DOHH2_400M_050219_2,8071 DOHH2_400M_050219_2,8071, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8072 45.03 511.0 163810.0 25 0 16277.0 + 23347 LTDDGNKWLY 10 101 612.7984751321814 1223.5823973311626 2 612.7989990115166 MULTI CID FTMS 0 0 0 8069 178766.609375 0.020662250504112 9 -0.3275947570800781 3 Unmodified _LTDDGNKWLY_ ENSG00000175166|ENST00000310118|PSMD2;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;ENST00000466987.1_1_3:184021130-184021370:+|nuORF;nc|ENSG00000175166|Q13200-2|PSMD2;nc|ENSG00000175166|Q13200-3|PSMD2 69.33821966488729 0.0189579340102328 2 [W{I|L}]WDD{I|L}T{I|L}Y 9 6 + 73.822 0.0 0.0 6.0333 6.0333 77.085 0.0 0.0 0.0 8.051214991653666 8.112431371158735 8.051214991653666 0.7918124604762511 0 0.9247425010840048 1.5228787452803376 0.7742275032520141 0.0 [W{I|L}]WDD{I|L}T{I|L}Y;[W{I|L}]DDW{I|L}T{I|L}Y;[W{I|L}]DWD{I|L}T{I|L}Y;[W{I|L}]WDDT{I|L}{I|L}Y;[W{I|L}]DDWT{I|L}{I|L}Y;[W{I|L}]DWDT{I|L}{I|L}Y;[W{I|L}]W{I|L}DDT{I|L}Y;[{I|L}T]D[WD]{I|L}W{I|L}Y;[W{I|L}]WD{I|L}DT{I|L}Y;[W{I|L}]W{I|L}DSE{I|L}Y 6.0333;5.9686;5.7873;5.7873;5.7226;5.5413;5.5391;5.3753;5.3577;5.3326 -;-;-;-;-;-;-;-;-;- 1651 1 1.995 69548.1 1.0 4526 3544 8069 DOHH2_400M_050219_2,8072 DOHH2_400M_050219_2,8072,LTDDGNKWLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8073 45.04 532.0 161600.0 25 0 30349.0 + 27816 PLPTPARAQAR 11 85 589.3427806603354 1176.6710083874707 2 589.3432494997978 MULTI CID FTMS 0 0 0 8069 179920.734375 0.3688066513348035 5 -0.2141532897949218 4 Unmodified _PLPTPARAQAR_ REV__ENSG00000139718|ENST00000604567|SETD1B;REV__nc|ENSG00000139718|Q9UPS6-2|SETD1B 3.2813086475875832 0.8596665074481906 2 Y 1 -1 11.783 0.0 0.0 1.0014 0.0 0.0 995.5968486968442 0.0 995.5968486968442 0.0 6.311674132245544 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0014 - 13 + 1 1.995 72747.7 1.0 4527 3544 8069 DOHH2_400M_050219_2,8073 DOHH2_400M_050219_2,8073,PLPTPARAQAR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8074 45.053 800.0 84990.0 25 0 7914.8 + 25561 NEVDPGDWQKF 11 99 667.8046622304998 1333.5947715277996 2 667.8042480349541 MULTI CID FTMS 0 0 0 8069 92662.921875 0.2939677695728286 3 -0.1551780700683593 5 Unmodified _NEVDPGDWQKF_ ENSG00000142207|ENST00000382751|URB1 57.10758569107544 0.0808838796364293 2 {[QD]|[EN]|[WG]|[KD]|[RS]}VDP[DG]WQK{M(Oxidation (M))|F} 11 0 + 54.312 0.0 0.0 4.0726 4.0726 72.95 0.0 0.0 0.0 7.367585652254185 3.4845464559211905 3.4845464559211905 3.4845464559211905 0 1.5 0.0 0.4247425010840047 0.3252574989159953 + + {[QD]|[EN]|[WG]|[KD]|[RS]}VDP[DG]WQK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VDP[DG]WQ{M(Oxidation (M))|F}K;{[QD]|[EN]|[WG]|[KD]|[RS]}VDP[DG]W[AG]K{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}VDP[DG]W[AG]{M(Oxidation (M))|F}K;{[QD]|[EN]|[WG]|[KD]|[RS]}[MT][HN]WQK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[MT][HN]WQ{M(Oxidation (M))|F}K 4.0726;3.8113;3.3881;3.1268;1.3308;1.0695 +;-;-;-;-;- + 454 + 1 1.995 58138.3 0.4600000083446502 4528 3544 8069 DOHH2_400M_050219_2,8074 DOHH2_400M_050219_2,8074,NEVDPGDWQKF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8076 45.061 169.0 295920.0 25 0 60625.0 + 40359 VHQTRQLLR 9 66 575.843230799288 1149.671908665376 2 575.8433105349541 MULTI CID FTMS 0 0 0 8075 372516.40625 0.7727553628448488 -3 0.1540641784667968 1 Unmodified _VHQTRQLLR_ REV__ENSG00000101343|ENST00000536226|CRNKL1;REV__ENST00000521379.1_1_20:20018163-20019094:-|nuORF;REV__nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;REV__nc|ENSG00000101343|Q9BZJ0|CRNKL1 0.6014990680409731 0.8936861360942873 2 K 1 -1 0.48455 0.0 0.0 0.042147 0.0 0.0 779.4540264405697 239.09270654849848 1018.546732989068 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.042147 - 1 + 1 1.995 48500.1 1.0 4529 3545 8075 DOHH2_400M_050219_2,8076 DOHH2_400M_050219_2,8076,VHQTRQLLR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8077 45.074 800.0 131560.0 25 0 11743.0 + 13804 HTDVGLLEY 9 129 523.7619556745005 1045.509358415801 2 523.7615844607353 MULTI CID FTMS 0 0 0 8075 83375.265625 0.6116150322025292 5 -0.1857452392578125 2 Unmodified _HTDVGLLEY_ ENSG00000196498|ENST00000405201|NCOR2;ENST00000542565.1_1_12:124970985-124979836:-|nuORF;nc|ENSG00000196498|Q9Y618-4|NCOR2;nc|ENSG00000196498|Q9Y618-5|NCOR2 71.13359017698441 0.0206607516130725 2 [HT]DVG{I|L}{I|L}EY 9 0 + 66.793 0.0 0.0 6.3886 6.3886 78.57 0.0 0.0 0.0 1.1809931207799451 10.598623115335071 1.1809931207799451 1.1809931207799451 0 0.7887254899964358 0.0 1.4291746928241125 0.0 + + [HT]DVG{I|L}{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}[HS]G{I|L}{I|L}EY;{[ES]|[DT]|[{I|L}C]}HVG{I|L}{I|L}EY;[HT]DR{I|L}{I|L}EY;{[ES]|[DT]|[{I|L}C]}HR{I|L}{I|L}EY;{[TV]|[{I|L}S]}[HD]G{I|L}{I|L}EY;{I|L}{I|L}DH[SG]{I|L}EY;{[QN]|[E{I|L}]|[KN]}VH[SG]{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}{I|L}H[SG]{I|L}EY;{[MG]|[TS]}[YT]G{I|L}{I|L}EY 6.3886;6.2756;6.0804;5.769;5.4608;5.0312;4.9257;4.9257;4.8884;4.5025 +;-;-;-;-;-;-;-;-;- + 1179 1 1.995 83718.0 0.4099999964237213 4530 3545 8075 DOHH2_400M_050219_2,8077 DOHH2_400M_050219_2,8077,HTDVGLLEY True True HTDVGLLEY 45.07446 523.761584460735 1773450.0 8075.0 nc|ENSG00000196498|Q9Y618-4|NCOR2;;ENSG00000196498|ENST00000405201|NCOR2;;nc|ENSG00000196498|Q9Y618-5|NCOR2;;ENST00000542565.1_1_12:124970985-124979836:-|nuORF 8.000425974527994 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8079 45.087 569.0 190040.0 25 0 27519.0 + 25784 NKFSILKSVW 10 103 611.3557452104335 1220.696937487667 2 611.3553344607353 MULTI CID FTMS 0 0 0 8078 119946.7890625 0.252283538032183 -19 1.0178070068359375 1 Unmodified _NKFSILKSVW_ REV__ENST00000472839.6_1_12:92819564-92822903:+|nuORF 3.944395688203298 0.708391353636983 2 W 1 -1 11.42 0.0 0.0 0.93553 0.0 0.0 1016.6062220109076 0.0 1016.6062220109076 0.0 0.8240512432299596 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.93553 + + 37 + 1 1.995 83073.7 1.0 4531 3546 8078 DOHH2_400M_050219_2,8079 DOHH2_400M_050219_2,8079,NKFSILKSVW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8080 45.1 754.0 133360.0 25 0 27811.0 + 16814 KGSGVVIIM 9 113 452.2702171474605 902.5258813617212 2 452.2702819705009 MULTI CID FTMS 0 0 0 8078 122881.8359375 0.1386478269607774 -5 0.2385826110839843 2 Unmodified _KGSGVVIIM_ ENSG00000133835|ENST00000510025|HSD17B4;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4 32.78568957990786 0.1150597335874693 2 {[QD]|[EN]|[WG]|[KD]|[RS]}GKV{I|L}{I|L}M 8 3 + 57.758 0.0 0.0 6.3995 6.3995 77.397 0.0 0.0 0.0 4.119543704721593 41.49079424672394 4.119543704721593 0.3959062302381255 0 1.0 0.0 0.6549471895720984 0.2614393726401688 {[QD]|[EN]|[WG]|[KD]|[RS]}GKV{I|L}{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}GVK{I|L}{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}VGK{I|L}{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}KGV{I|L}{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}GK{I|L}V{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}KG{I|L}V{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}VG{I|L}K{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}GV{I|L}K{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}V[KA]V{I|L}M;[YV]{I|L}KG[NP]{I|L} 6.3995;6.3557;6.3557;6.066;5.5627;5.2291;4.9531;4.9531;3.8186;2.4395 -;-;-;-;-;-;-;-;-;- 263 1 1.995 78731.3 1.0 4532 3546 8078 DOHH2_400M_050219_2,8080 DOHH2_400M_050219_2,8080,KGSGVVIIM True True KGSGVVIIM 45.100037 452.270281970501 10888567.0 8078.0 nc|ENSG00000133835|P51659-3|HSD17B4;;nc|ENSG00000133835|P51659-2|HSD17B4;;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;;ENSG00000133835|ENST00000510025|HSD17B4 3.4222657680511475 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8081 45.105 249.0 189690.0 25 0 12790.0 + 25376 NAYMKSLL 8 90 470.25275154029765 938.4909501473952 2 470.2524291872978 MULTI CID FTMS 0 0 0 8078 103400.90625 0.8124052766350394 1 -0.0929985046386718 3 Unmodified _NAYMKSLL_ ENSG00000100365|ENST00000248899|NCF4;nc|ENSG00000100365|Q15080-3|NCF4 15.847184025352805 0.6768015514314958 2 {[QG]|[NA]}Y 3 5 30.942 0.0 0.0 3.297 0.0 0.0 0.0 587.3260080910078 587.3260080910078 18.46787486224656 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[QG]|[NA]}Y 3.297 + + 47 1 1.995 41580.7 1.0 4533 3546 8078 DOHH2_400M_050219_2,8081 DOHH2_400M_050219_2,8081,NAYMKSLL False True NAYMKSLL 45.104662 470.252429187298 1827183.375 8078.0 nc|ENSG00000100365|Q15080-3|NCF4;;ENSG00000100365|ENST00000248899|NCF4 4.861700057983398 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8082 45.118 800.0 50419.0 25 0 4783.5 + 30557 RENTQTTIKLF 11 72 675.8721484079288 1349.7297438826574 2 676.3721191287041 MULTI CID FTMS 0 0 0 8078 90455.90625 1.0 0 0.0 4 Unmodified _RENTQTTIKLF_ ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK 12.872603262515298 0.7673816944342327 2 {I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4 7 26.198 0.0 0.0 1.941 0.0 0.0 830.3896398915083 0.0 830.3896398915083 0.0 13.098943791441968 0.0 0.0 0 1.0 0.0 0.0 0.0 + {I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 1.941 + + 19 1 1.995 39398.2 0.4699999988079071 4534 3546 8078 DOHH2_400M_050219_2,8082 DOHH2_400M_050219_2,8082,RENTQTTIKLF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8083 45.127 462.0 186720.0 25 0 28345.0 + -1 LLFMPARL 8 98 488.7874444309807 975.5603359287614 2 488.7885009646416 MULTI CID FTMS 0 0 0 8078 105020.6875 1.0 0 0.0 5 Oxidation (M) _LLFM(Oxidation (M))PARL_ REV__ENSG00000132975|ENST00000405846|GPR12 20.871210003555333 0.6025813472596342 2 {I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D 6 -1 29.666 0.0 0.0 3.0409 0.0 0.0 0.0 224.16372713696515 224.16372713696515 13.384315473529185 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D 3.0409 - 118 1 1.995 70425.8 1.0 4535 3546 8078 DOHH2_400M_050219_2,8083 DOHH2_400M_050219_2,8083,LLFMPARL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8084 45.141 800.0 128680.0 25 0 10151.0 + 30068 QVDFSPDMSY 10 128 594.7473704613028 1187.4801879894055 2 594.7476684451103 MULTI CID FTMS 0 0 0 8078 86438.96875 0.5433497749831556 -2 0.0621795654296875 6 Unmodified _QVDFSPDMSY_ ENSG00000168438|ENST00000307731|CDC40;ENST00000606893.5_1_6:110533295-110551331:+|nuORF 75.76082778847304 0.0187510588500744 2 {[QV]|[N{I|L}]|[RA]|[KV]}D{M(Oxidation (M))|F}S 5 5 37.219 0.0 0.0 3.1342 0.0 0.0 0.0 608.2006219095805 608.2006219095805 7.842316264383662 0.0 0.0 0.0 0 0.2742275032520141 1.2218487496163564 0.8829131673969606 1.146591250700361 + {[QV]|[N{I|L}]|[RA]|[KV]}D{M(Oxidation (M))|F}S 3.1342 + + 627 1 1.995 79139.9 0.4399999976158142 4536 3546 8078 DOHH2_400M_050219_2,8084 DOHH2_400M_050219_2,8084,QVDFSPDMSY True True QVDFSPDMSY 45.140516 594.74766844511 1013560.625 8078.0 ENSG00000168438|ENST00000307731|CDC40;;ENST00000606893.5_1_6:110533295-110551331:+|nuORF 7.649288654327393 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8085 45.154 800.0 175790.0 25 0 17285.0 + 14342 IERVKEAIF 9 150 552.8229678181652 1103.6313827031304 2 552.8234741091728 MULTI CID FTMS 0 0 0 8078 87787.75 0.8084967319320907 3 -0.1519737243652343 7 Unmodified _IERVKEAIF_ REV__ENSG00000104967|ENST00000263257|NOVA2 12.531546534597751 0.4974689918368763 2 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 1.1303 0.0 0.0 938.5519434714882 0.0 938.5519434714882 0.0 -0.8366748685809071 -0.8366748685809071 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1303 + + 162 + 1 1.995 107630.9 0.949999988079071 4537 3546 8078 DOHH2_400M_050219_2,8085 DOHH2_400M_050219_2,8085,IERVKEAIF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8086 45.167 669.0 100600.0 25 0 5350.2 + 808 AESPVFKEL 9 118 510.2731067412347 1018.5316605492694 2 510.2734557986259 MULTI CID FTMS 0 0 0 8078 85848.4140625 1.0 0 0.0 8 Unmodified _AESPVFKEL_ ENSG00000168575|ENST00000520262|SLC20A2 29.84058131909904 0.1515068451768857 2 {[CP]|[EA]}SPV{M(Oxidation (M))|F} 6 3 33.148 0.0 0.0 3.2545 0.0 0.0 0.0 385.20896326236567 385.20896326236567 20.384140311638923 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + {[CP]|[EA]}SPV{M(Oxidation (M))|F} 3.2545 + + 236 + 1 1.995 55094.8 1.0 4538 3546 8078 DOHH2_400M_050219_2,8086 DOHH2_400M_050219_2,8086,AESPVFKEL False True AESPVFKEL 45.167449 510.273455798626 857515.1875 8078.0 ENSG00000168575|ENST00000520262|SLC20A2 6.5745469729105634 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8088 45.174 117.0 441630.0 25 0 49544.0 + 5317 DLDSRVLYY 9 70 572.2875708633626 1142.560588793525 2 572.2877075076103 MULTI CID FTMS 0 0 0 8087 325750.84375 0.0453142531840918 7 -0.17645263671875 1 Unmodified _DLDSRVLYY_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 24.99096001346401 0.2132109383330889 2 {NN|[MP]|[D{I|L}]|[EV]}[QT]V{[QN]|[E{I|L}]|[KN]}YY 9 4 + 47.157 0.0 0.0 4.1273 4.1273 82.792 0.0 0.0 0.0 37.134928107446186 11.992333953776964 11.992333953776964 15.172203223519528 0 1.305462187404089 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[QT]V{[QN]|[E{I|L}]|[KN]}YY;{[TV]|[{I|L}S]}[RV]DD{I|L}YY;{[TV]|[{I|L}S]}[RV]YD{NN|[MP]|[D{I|L}]|[EV]}Y 4.1273;2.7994;1.5714 -;-;- 79 + 1 1.995 44881.7 1.0 4539 3547 8087 DOHH2_400M_050219_2,8088 DOHH2_400M_050219_2,8088,DLDSRVLYY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8089 45.176 112.0 423010.0 25 0 37129.0 + 11201 GENLPPLTY 9 83 502.2585636270432 1002.5025743208864 2 502.2585021853447 MULTI CID FTMS 0 0 0 8087 425198.625 0.8411462707427295 -1 0.0929985046386718 2 Unmodified _GENLPPLTY_ ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1 52.268347100219714 0.0353964759249114 2 {[DA]|[EG]}N{I|L}P[{I|L}P]TY 9 0 {[DA]|[EG]}N{I|L} + + 33.698 28.94 7.0041 3.3614 3.3614 49.765 0.0 0.0 0.0 0.0 4.757724967479859 0.0 0.0 0 0.3494850021680094 0.0 1.0994850021680094 0.0 + + {[DA]|[EG]}N{I|L}P[{I|L}P]TY 3.3614 + + 164 + 1 1.995 41561.8 1.0 4540 3547 8087 DOHH2_400M_050219_2,8089 DOHH2_400M_050219_2,8089,GENLPPLTY True True GENLPPLTY 45.176143 502.258502185345 11159290.0 8087.0 ENSG00000001630|ENST00000003100|CYP51A1;;nc|ENSG00000001630|Q16850-2|CYP51A1;;ENST00000419457.1_1_13:29296686-29297403:-|nuORF 8.016021569569906 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8090 45.178 71.0 807780.0 25 0 109860.0 + 23912 LVNELTEFAK 10 75 582.3188736014009 1162.6231942696018 2 582.3188354372978 MULTI CID FTMS 0 0 0 8087 423905.5 1.0 0 0.0 3 Unmodified _LVNELTEFAK_ CON__P02769 23.80106514851385 0.4339316747945569 2 [{I|L}V]NE{I|L}TPSKY 10 4 + 68.911 0.0 0.0 5.9272 5.9272 76.064 0.0 0.0 0.0 24.25968732272281 0.4575749056067479 0.4575749056067479 0.4575749056067479 0 0.7302046884880937 1.6989700043360187 0.0 0.3807196863200844 [{I|L}V]NE{I|L}TPSKY;[{I|L}V]NE{I|L}TPSYK;[{I|L}V]GGE{I|L}TPSKY;[{I|L}V]GGE{I|L}TPSYK;[{I|L}V]NE{I|L}TE{M(Oxidation (M))|F}AK;[{I|L}V]GGE{I|L}TE{M(Oxidation (M))|F}AK 5.9272;5.8879;5.1389;5.0996;4.9297;4.1415 -;-;-;-;+;- + 299 + 1 1.995 48701.1 1.0 4541 3547 8087 DOHH2_400M_050219_2,8090 DOHH2_400M_050219_2,8090,LVNELTEFAK False True False False contaminant PXD020620_cell_line DOHH2_400M_050219_2 8091 45.181 168.0 193370.0 25 0 13021.0 + 19221 LEGRGLRRY 9 74 560.3218621726122 1118.6291714120243 2 560.3223754763603 MULTI CID FTMS 0 0 0 8087 266805.65625 0.8278775373065945 4 -0.1212997436523437 4 Unmodified _LEGRGLRRY_ REV__ENSG00000074855|ENST00000159087|ANO8;REV__ENST00000597643.5_1_19:17434328-17439993:-|nuORF;REV__nc|ENSG00000074855|Q9HCE9-2|ANO8 4.75600775471527 0.7486543447549536 2 Y 1 -1 13.979 0.0 0.0 1.2497 0.0 0.0 937.5551337917104 0.0 937.5551337917104 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2497 + + 24 + 1 1.995 29384.4 1.0 4542 3547 8087 DOHH2_400M_050219_2,8091 DOHH2_400M_050219_2,8091,LEGRGLRRY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8092 45.186 239.0 194670.0 25 0 44654.0 3474 CGGLPAASPLL 11 77 499.76864476371713 997.5227365942344 2 499.7691528201103 MULTI CID FTMS 0 0 0 8087 147492.65625 0.7195584191612092 -3 0.1551780700683593 5 Unmodified _CGGLPAASPLL_ ENST00000487002.1_1_1:155279546-155279798:+|nuORF 19.256988751693697 0.6345794173041263 2 {I|L}HWD{I|L} 5 9 29.821 0.0 0.0 2.9895 0.0 0.0 315.1724691155218 0.0 315.1724691155218 0.0 14.336068845642204 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}HWD{I|L} 2.9895 - 103 + 1 1.995 41744.8 1.0 4543 3547 8087 DOHH2_400M_050219_2,8092 DOHH2_400M_050219_2,8092,CGGLPAASPLL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8093 45.192 348.0 99481.0 25 0 24794.0 18841 LASPHSPIL 9 57 467.7716192626435 933.5286855920872 2 467.7717162966728 MULTI CID FTMS 0 0 0 8087 118087.8359375 0.0253856252122852 11 -0.2055397033691406 6 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 23.1484247019978 0.2366544122328345 2 {I|L}{I|L} 2 7 21.454 0.0 0.0 2.2981 0.0 0.0 689.3499421612262 0.0 689.3499421612262 0.0 5.969100130080562 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 2.2981 + + 68 + 1 1.995 32750.2 1.0 4544 3547 8087 DOHH2_400M_050219_2,8093 DOHH2_400M_050219_2,8093,LASPHSPIL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8095 45.197 81.0 721990.0 25 0 86219.0 + 9457 LVNELTEFAK 10 74 582.2665042201633 1162.5184555071264 2 582.2665283083916 MULTI CID FTMS 0 0 0 8094 422876.0 0.6257263555114237 2 -0.0472946166992187 1 Unmodified _FLDDFESKY_ P02769 19.361941925380144 0.3125782356748823 2 VNE{I|L}TPSKY 9 6 47.305 0.0 0.0 4.0691 0.0 0.0 112.97922318466392 0.0 112.97922318466392 0.0 14.062755376215977 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 VNE{I|L}TPSKY 4.0691 - 490 + 1 1.995 49982.7 1.0 4545 3548 8094 DOHH2_400M_050219_2,8095 DOHH2_400M_050219_2,8095,FLDDFESKY False True LVNELTEFAK 45.196672 582.266528308392 5983018.5 8094.0 P02769 6.643535296122233 2.0 False 10.0 False unknown PXD020620_cell_line DOHH2_400M_050219_2 8096 45.211 800.0 123190.0 25 0 13180.0 + 7731 ELDPMAMTQKY 11 107 663.8069266612266 1325.5993003892531 2 663.8070556521416 MULTI CID FTMS 0 0 0 8094 75696.171875 0.0454988685566181 7 -0.1568183898925781 2 Unmodified _ELDPMAMTQKY_ ENSG00000087365|ENST00000322535|SF3B2;ENST00000534765.1_1_11:65835264-65836005:+|nuORF 67.08073823543168 0.0408645806987127 2 {[QN]|[E{I|L}]|[KN]}DPMAMTQKY 11 0 + 87.188 0.0 0.0 6.5773 6.5773 88.034 0.0 0.0 0.0 62.13896546296998 12.31608586905513 12.31608586905513 9.128498242811006 0 0.5283773187068795 2.0 0.0 1.0994850021680094 + + {[QN]|[E{I|L}]|[KN]}DPMAMTQKY;{[QN]|[E{I|L}]|[KN]}DPMAMT[AG]KY;{[QN]|[E{I|L}]|[KN]}DPMAM[KA]{[SA]|[TG]}Y;{[QN]|[E{I|L}]|[KN]}DP[W{M(Oxidation (M))|F}]TQKY;{[QN]|[E{I|L}]|[KN]}DP[W{M(Oxidation (M))|F}]T[AG]KY;{[QN]|[E{I|L}]|[KN]}D[W{M(Oxidation (M))|F}]PTQKY;{[QN]|[E{I|L}]|[KN]}D[W{M(Oxidation (M))|F}]PT[AG]KY;{[QN]|[E{I|L}]|[KN]}D{[CA]|SS}QKNC(Carbamidomethyl (C))[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}D[W{M(Oxidation (M))|F}][WR]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QN]|[E{I|L}]|[KN]}D[{I|L}V]Q{[CT]|[{M(Oxidation (M))|F}G]}M{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 6.5773;5.8886;4.986;4.6484;3.9571;3.8941;3.2027;1.7979;1.6712;1.4263 +;-;-;-;-;-;-;-;-;- + 778 + 1 1.995 78551.1 0.4900000095367431 4546 3548 8094 DOHH2_400M_050219_2,8096 DOHH2_400M_050219_2,8096,ELDPMAMTQKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8097 45.213 95.0 516260.0 25 0 50991.0 + 8370 ESDLDYIQY 9 79 573.2536606983009 1144.4927684634015 2 573.2535888552666 MULTI CID FTMS 0 0 0 8094 361608.15625 0.6613827315281751 -3 0.1384506225585937 3 Unmodified _ESDLDYIQY_ ENSG00000182628|ENST00000330137|SKA2;ENST00000437036.6_1_17:57189640-57232487:-|nuORF;ENST00000583976.1_1_17:57189640-57232487:-|nuORF 44.40701690623563 0.0526327925666318 2 {NN|[MP]|[D{I|L}]|[EV]}DSEY 6 5 33.808 0.0 0.0 2.9539 0.0 0.0 0.0 419.1957088431373 419.1957088431373 14.611812126263438 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9247425010840048 0.0 {NN|[MP]|[D{I|L}]|[EV]}DSEY 2.9539 - 122 1 1.995 43546.5 1.0 4547 3548 8094 DOHH2_400M_050219_2,8097 DOHH2_400M_050219_2,8097,ESDLDYIQY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8098 45.226 800.0 134440.0 25 0 12503.0 + 45519 YTSYPMHDFY 10 117 662.2712885192476 1322.5280241052951 2 662.2718994021416 MULTI CID FTMS 0 0 0 8094 93188.625 0.8677165124066032 -2 0.1174240112304687 4 Unmodified _YTSYPMHDFY_ ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11 74.92900055777586 0.0187778523875693 2 YTSYP[KC]{M(Oxidation (M))|F}EW 10 5 + 77.102 0.0 0.0 5.8299 5.8299 75.295 0.0 0.0 0.0 23.45098040014257 0.1986269784956533 0.1986269784956533 0.1986269784956533 0 0.6237125054200234 1.5228787452803376 0.75 0.0 YTSYP[KC]{M(Oxidation (M))|F}EW;YTSY[DN]VDSPY;YTSY[DN]V{M(Oxidation (M))|F}S{NN|[MP]|[D{I|L}]|[EV]};YTSYP[KC]{M(Oxidation (M))|F}S{NN|[MP]|[D{I|L}]|[EV]};YTSYP[WC(Carbamidomethyl (C))]SPY;YTSYPM[HD]{M(Oxidation (M))|F}Y;YTSY[DN]V{M(Oxidation (M))|F}N[NS];YTSYP[KC]{M(Oxidation (M))|F}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};YTSYP[KC]{M(Oxidation (M))|F}N[NS];YTSY[DN]V{M(Oxidation (M))|F}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.8299;5.8149;5.6181;5.5053;5.4508;5.4185;5.1513;5.1369;5.0385;5.0038 -;-;-;-;-;+;-;-;-;- + 2202 + 1 1.995 84283.1 0.4699999988079071 4548 3548 8094 DOHH2_400M_050219_2,8098 DOHH2_400M_050219_2,8098,YTSYPMHDFY True True YTSYPMHDFY 45.226436 662.271899402142 703981.9375 8094.0 ENSG00000138081|ENST00000403359|FBXO11;;nc|ENSG00000138081|Q86XK2-5|FBXO11;;nc|ENSG00000138081|Q86XK2-6|FBXO11 8.519679387410482 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8100 45.235 234.0 221200.0 25 0 21667.0 + 45242 YRTDMIQAL 9 76 555.7843591969125 1109.554165460625 2 555.7845947146416 MULTI CID FTMS 0 0 0 8099 198414.9375 0.3927744056168054 3 -0.08551025390625 1 Unmodified _YRTDMIQAL_ ENSG00000174231|ENST00000304992|PRPF8;ENST00000572445.1_1_17:1564285-1564453:-|nuORF;ENST00000573681.1_1_17:1563133-1564615:-|nuORF 24.99096001346401 0.2132109383330889 2 M{I|L}QA{I|L} 5 4 51.013 0.0 0.0 4.5977 0.0 0.0 535.237622747841 0.0 535.237622747841 0.0 39.593438765655634 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 + M{I|L}QA{I|L} 4.5977 + + 52 1 1.995 46990.6 1.0 4549 3549 8099 DOHH2_400M_050219_2,8100 DOHH2_400M_050219_2,8100,YRTDMIQAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8101 45.239 239.0 284370.0 25 0 41253.0 + 19087 LDRRRRDT 8 90 544.3089661663242 1086.6033793994484 2 544.3092529177666 MULTI CID FTMS 0 0 0 8099 199297.234375 0.5073894951032129 4 -0.1134414672851562 2 Unmodified _LDRRRRDT_ REV__ENSG00000240583|ENST00000311813|AQP1;REV__nc|ENSG00000240583|P29972-2|AQP1;REV__nc|ENSG00000240583|P29972-3|AQP1;REV__nc|ENSG00000240583|P29972-4|AQP1 8.593279151180031 0.7721714526254883 2 Y 1 -1 10.713 0.0 0.0 0.98595 0.0 0.0 905.5288840154624 0.0 905.5288840154624 0.0 0.2287874528033739 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.98595 - 43 + 1 1.995 57284.1 1.0 4550 3549 8099 DOHH2_400M_050219_2,8101 DOHH2_400M_050219_2,8101,LDRRRRDT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8103 45.252 576.0 190690.0 25 0 10780.0 + 25411 NEAPGPINF 9 132 479.7351474902783 957.4557420473566 2 479.7348815798759 MULTI CID FTMS 0 0 0 8102 172320.5 0.6387927030878991 -3 0.0717201232910156 1 Unmodified _NEAPGPINF_ ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B;ENST00000569826.2_1_15:42864283-42864628:+|nuORF 75.76082778847304 0.0188720312721366 2 {[QD]|[EN]|[WG]|[KD]|[RS]}A[PG]P{I|L}N{M(Oxidation (M))|F} 9 0 + 48.595 0.0 0.0 5.0754 5.0754 86.258 0.0 0.0 0.0 23.897328409264908 33.11014809900988 23.897328409264908 13.478786875752682 0 1.4731975075880328 0.0 0.5283773187068795 1.146591250700361 + + {[QD]|[EN]|[WG]|[KD]|[RS]}A[PG]P{I|L}N{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[QP]P{I|L}N{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}[R{M(Oxidation (M))|F}]{I|L}N{M(Oxidation (M))|F} 5.0754;3.6676;2.0391 +;-;- + 229 1 1.995 88357.2 1.0 4551 3550 8102 DOHH2_400M_050219_2,8103 DOHH2_400M_050219_2,8103,NEAPGPINF True True NEAPGPINF 45.251803 479.734881579876 1501381.5 8102.0 ENST00000569826.2_1_15:42864283-42864628:+|nuORF;;ENSG00000101608|ENST00000217652|MYL12A;;ENSG00000118680|ENST00000237500|MYL12B 6.300913174947103 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8104 45.261 529.0 169820.0 25 0 21508.0 + 1987 ANQRLPQI 8 131 470.27168272523176 938.5288125172636 2 470.2726013064384 MULTI CID FTMS 0 0 0 8102 119505.7421875 0.9018314387293466 -1 0.0127449035644531 2 Unmodified _ANQRLPQI_ REV__ENSG00000157450|ENST00000348370|RNF111;REV__nc|ENSG00000157450|Q6ZNA4-3|RNF111;REV__nc|ENSG00000157450|Q6ZNA4-4|RNF111;REV__nc|ENSG00000157450|Q6ZNA4|RNF111 19.438996006549623 0.6237395211498085 2 {[QG]|[NA]}Y 3 -1 25.032 0.0 0.0 2.6671 0.0 0.0 0.0 587.3627413104854 587.3627413104854 13.438126803997292 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.4574345711512606 {[QG]|[NA]}Y 2.6671 - 31 1 1.995 73713.8 1.0 4552 3550 8102 DOHH2_400M_050219_2,8104 DOHH2_400M_050219_2,8104,ANQRLPQI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8105 45.275 800.0 164240.0 25 0 17348.0 + 19117 LDVKLQRGD 9 134 522.2949282510854 1042.5753035689706 2 522.2955200076103 MULTI CID FTMS 0 0 0 8102 105512.671875 0.4190234525669302 -12 0.6908912658691406 3 Unmodified _LDVKLQRGD_ REV__ENSG00000106344|ENST00000223073|RBM28;REV__nc|ENSG00000106344|Q9NW13-2|RBM28 7.289230182591677 0.6602208344931196 2 {I|L} 1 -1 11.259 0.0 0.0 1.0799 0.0 0.0 911.4802851136956 0.0 911.4802851136956 0.0 0.4216044285001796 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0799 + + 87 + 1 1.995 103712.6 0.4600000083446502 4553 3550 8102 DOHH2_400M_050219_2,8105 DOHH2_400M_050219_2,8105,LDVKLQRGD False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8106 45.289 800.0 78370.0 25 0 6073.7 + -1 PTDPDPIRGFGSY 13 94 711.3389331544021 1420.663313375604 2 711.3346435427666 MULTI CID FTMS 0 0 0 8102 84163.3671875 1.0 0 0.0 4 Carbamidomethyl (C) _PTSYHFC(Carbamidomethyl (C))LHFL_ ENSG00000102699|ENST00000381989|PARP4;ENST00000446672.2_1_13:19968469-19969442:+|nuORF 5.296884461304476 0.8501568894076437 2 PTDPD 5 -1 69.196 0.0 0.0 4.8707 0.0 0.0 0.0 892.4329602527322 892.4329602527322 52.99803764475705 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.0 0.0 PTDPD 4.8707 - 68 + 1 1.995 51974.6 0.449999988079071 4554 3550 8102 DOHH2_400M_050219_2,8106 DOHH2_400M_050219_2,8106,PTSYHFCLHFL False False PTDPDPIRGFGSY 45.288763 711.334643542767 757944.5 8102.0 ENSG00000102699|ENST00000381989|PARP4;;ENST00000446672.2_1_13:19968469-19969442:+|nuORF 6.259673595428467 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8108 45.294 56.0 729310.0 25 0 148440.0 25159 MRQLVLFNI 9 68 567.3300059642745 1132.645458995349 2 567.3298828005791 MULTI CID FTMS 0 0 0 8107 876982.0625 0.7046129490744033 4 -0.0599441528320312 1 Unmodified _MRQLVLFNI_ ENST00000481603.1_1_11:5626782-5632007:+|nuORF 1.1933415558491238 0.8730252149911817 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 37101.7 1.0 4555 3551 8107 DOHH2_400M_050219_2,8108 DOHH2_400M_050219_2,8108,MRQLVLFNI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8109 45.301 434.0 204310.0 25 0 33010.0 + 7919 ELQLIPTAPVP 11 98 589.3427806603354 1176.6710083874707 2 589.3433105349541 MULTI CID FTMS 0 0 0 8107 185245.0625 0.3797206109360145 12 -0.2240562438964843 2 Unmodified _ELQLIPTAPVP_ REV__ENSG00000100505|ENST00000684578|TRIM9;REV__nc|ENSG00000100505|Q9C026-5|TRIM9;REV__nc|ENSG00000100505|Q9C026|TRIM9 5.731851221503515 0.8481046878870278 2 Y 1 -1 10.485 0.0 0.0 0.89103 0.0 0.0 995.596818179266 0.0 995.596818179266 0.0 0.0269751594335314 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.89103 - 80 + 1 1.995 72249.2 1.0 4556 3551 8107 DOHH2_400M_050219_2,8109 DOHH2_400M_050219_2,8109,ELQLIPTAPVP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8110 45.305 167.0 338350.0 25 0 23764.0 + 4821 DEVERVITI 9 80 537.2956520756081 1072.5767512180162 2 537.2956420779228 MULTI CID FTMS 0 0 0 8107 201014.828125 0.2007725959879405 -10 0.452880859375 3 Unmodified _DEVERVITI_ ENSG00000231500|ENST00000439602|RPS18;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 42.312485326615175 0.0627620958981271 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VERV{I|L}T{I|L} 9 0 + 49.759 0.0 0.0 4.6392 4.6392 87.318 0.0 0.0 0.0 4.762036441594191 38.50043086104844 4.762036441594191 49.75949072601743 0 2.167735320183944 0.0 0.0 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VERV{I|L}T{I|L} 4.6392 + + 55 1 1.995 52563.4 1.0 4557 3551 8107 DOHH2_400M_050219_2,8110 DOHH2_400M_050219_2,8110,DEVERVITI True True DEVERVITI 45.304559 537.295642077923 11212940.0 8107.0 ENST00000496813.5_1_6:33239896-33244045:+|nuORF;;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;;ENSG00000231500|ENST00000439602|RPS18 6.662859757741292 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8111 45.312 413.0 325420.0 25 0 33655.0 + + -1 LTDDGNKWLY 10 131 613.290395585017 1224.566238236834 2 613.2907592654228 MULTI CID FTMS 0 0 0 8107 210906.25 0.1995475778312427 -11 0.5563621520996094 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SLTHFDSTLY_ ENST00000466987.1_1_3:184021130-184021370:+|nuORF;ENSG00000175166|ENST00000310118|PSMD2;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;nc|ENSG00000175166|Q13200-3|PSMD2;nc|ENSG00000175166|Q13200-2|PSMD2 39.957323273325 0.1580177220464651 2 [{I|L}T]DD[RN]DT{I|L}Y 10 -1 + 70.614 0.0 0.0 5.7665 5.7665 76.329 0.0 0.0 0.0 0.924005240709036 0.924005240709036 0.924005240709036 0.924005240709036 0 2.048455006504028 2.0 1.329689690656103 0.0 [{I|L}T]DD[RN]DT{I|L}Y;{I|L}TDD[DG]KW{I|L}Y;[{I|L}T]D[RN]DDT{I|L}Y;[{I|L}T]DD[RN]SE{I|L}Y;[{I|L}T]D[RN]DSE{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}GDDAD{I|L}T{I|L}Y;[{I|L}T]DD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}{I|L}Y;[{I|L}T]DD[DG]KW{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}GDDW{I|L}T{I|L}Y;[{I|L}T]DD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E{I|L}Y 5.7665;5.691;5.5863;5.4535;5.2733;5.2238;5.2118;5.2018;5.1785;5.0484 -;-;-;-;-;-;-;-;-;- 4489 1 1.995 102587.2 1.0 4558 3551 8107 DOHH2_400M_050219_2,8111 DOHH2_400M_050219_2,8111,SLTHFDSTLY False False LTDDGNKWLY 45.311946 613.291 0.0 8107.0 ENST00000466987.1_1_3:184021130-184021370:+|nuORF;;ENSG00000175166|ENST00000310118|PSMD2;;ENST00000460628.1_1_3:184020551-184021585:+|nuORF;;nc|ENSG00000175166|Q13200-3|PSMD2;;nc|ENSG00000175166|Q13200-2|PSMD2 4.435425360997518 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8113 45.319 151.0 300360.0 25 0 51596.0 + 30185 QVVDHRLKR 9 73 575.843230799288 1149.671908665376 2 575.8433105349541 MULTI CID FTMS 0 0 0 8112 281214.28125 0.5833564382629043 4 -0.0407867431640625 1 Unmodified _QVVDHRLKR_ REV__ENSG00000120800|ENST00000261637|UTP20 2.059750862983233 0.8427793054688888 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.995 39760.7 1.0 4559 3552 8112 DOHH2_400M_050219_2,8113 DOHH2_400M_050219_2,8113,QVVDHRLKR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8114 45.326 401.0 201660.0 25 0 18949.0 + 19315 LELQLEKV 8 107 486.2908642531634 970.5671755731267 2 486.2883788943291 MULTI CID FTMS 0 0 0 8112 149882.859375 0.5314088720906308 -6 0.2374839782714843 2 Unmodified _LELQLEKV_ REV__ENSG00000116254|ENST00000262450|CHD5 37.97399986684836 0.2681860861828418 2 {I|L}NK{M(Oxidation (M))|F}VK 6 -1 56.348 0.0 0.0 5.8057 0.0 0.0 0.0 238.12020288638908 238.12020288638908 39.203776956815545 0.0 0.0 0.0 0 0.4291746928241126 2.0 0.0 0.7134679910804405 {I|L}NK{M(Oxidation (M))|F}VK 5.8057 - 666 + 1 1.995 66816.3 1.0 4560 3552 8112 DOHH2_400M_050219_2,8114 DOHH2_400M_050219_2,8114,LELQLEKV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8115 45.34 800.0 169910.0 25 0 17112.0 + 33046 SEPSFITESY 10 74 1159.515255774312 1158.507979307712 1 1159.513110339642 MULTI CID FTMS 0 0 0 8112 74443.8203125 0.5747243481370995 -8 0.2996635437011719 3 Unmodified _SEPSFITESY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 118.89474601620944 0.0006744381916515 2 {I|L}TDTESY 7 6 64.958 0.0 0.0 5.607 0.0 0.0 331.15330702949376 0.0 331.15330702949376 0.0 4.476737238972092 0.0 0.0 0 0.7134679910804405 0.0 2.0356668758921828 0.0 {I|L}TDTESY 5.607 - 1443 1 1.995 86830.4 0.4000000059604645 4561 3552 8112 DOHH2_400M_050219_2,8115 DOHH2_400M_050219_2,8115,SEPSFITESY True True SEPSFITESY 45.339877 1159.51311033964 905806.125 8112.0 ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;nc|ENSG00000134954|P14921-2|ETS1;;nc|ENSG00000134954|P14921-5|ETS1 8.19100824991862 1.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8118 45.349 76.0 631300.0 25 0 154540.0 + 16815 KGSGVVIIM 9 71 452.2702171474605 902.5258813617212 2 452.2701293826103 MULTI CID FTMS 0 0 0 8117 755420.8125 0.8523428486805918 3 -0.0126914978027343 1 Unmodified _KGSGVVIIM_ ENSG00000133835|ENST00000510025|HSD17B4;ENST00000515235.6_1_5:118829562-118961685:+|nuORF;nc|ENSG00000133835|P51659-2|HSD17B4;nc|ENSG00000133835|P51659-3|HSD17B4 20.41453444215458 0.284085796332423 2 KV{I|L}{I|L}M 5 4 45.573 0.0 0.0 5.0495 0.0 0.0 300.1435719220719 0.0 300.1435719220719 0.0 40.42288138967165 0.0 0.0 0 1.0 0.0 0.0 0.0 KV{I|L}{I|L}M 5.0495 - 89 1 1.995 45953.3 1.0 4562 3554 8117 DOHH2_400M_050219_2,8118 DOHH2_400M_050219_2,8118,KGSGVVIIM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8122 45.373 800.0 82263.0 25 0 9551.0 41712 VPSNVPLKEVL 11 105 597.8564722118422 1193.6983914904845 2 597.8571655154228 MULTI CID FTMS 0 0 0 8121 46078.125 0.2666494265319344 17 -1.0227584838867188 1 Unmodified _VPSNVPLKEVL_ ENSG00000116815|ENST00000369489|CD58;nc|ENSG00000116815|P19256-2|CD58;nc|ENSG00000116815|P19256-3|CD58 8.155526934196011 0.8366696279279818 2 [VP]VCVV 6 7 21.19 0.0 0.0 1.7752 0.0 0.0 0.0 594.336244844253 594.336244844253 8.091092062267407 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [VP]VCVV 1.7752 - 174 1 1.995 55231.9 0.449999988079071 4563 3557 8121 DOHH2_400M_050219_2,8122 DOHH2_400M_050219_2,8122,VPSNVPLKEVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8126 45.389 283.0 174020.0 25 0 14722.0 + 450 AEFPDEPKW 9 77 559.7614572391299 1117.5083615450596 2 559.7616454958916 MULTI CID FTMS 0 0 0 8125 82180.46875 0.272841653433233 -4 0.0283126831054687 1 Unmodified _AEFPDEPKW_ ENSG00000085377|ENST00000652536|PREP 20.41453444215458 0.284085796332423 2 {[CP]|[EA]}{M(Oxidation (M))|F}PDE[KP]W 9 0 + 30.072 0.0 0.0 2.691 2.691 81.011 0.0 0.0 0.0 18.289100949969125 2.676062401770313 2.676062401770313 30.071837567538186 0 0.5 0.0 0.0 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}PDE[KP]W 2.691 + + 62 + 1 1.995 44572.3 1.0 4564 3560 8125 DOHH2_400M_050219_2,8126 DOHH2_400M_050219_2,8126,AEFPDEPKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8127 45.403 800.0 73584.0 25 0 8462.1 + 14241 IDVSVKLRY 9 90 546.8225651635397 1091.630577393879 2 546.8217651247978 MULTI CID FTMS 0 0 0 8125 83476.9921875 0.7861675108696204 -3 0.0244407653808593 2 Unmodified _IDVSVKLRY_ REV__ENST00000267884.10_1_15:40328186-40328351:-|nuORF 4.75600775471527 0.7486543447549536 2 W 1 -1 11.783 0.0 0.0 1.0794 0.0 0.0 887.5399382110653 0.0 887.5399382110653 0.0 0.1889428044469987 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.0794 - 31 + 1 1.995 50651.3 0.4600000083446502 4565 3560 8125 DOHH2_400M_050219_2,8127 DOHH2_400M_050219_2,8127,IDVSVKLRY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8128 45.417 800.0 111640.0 25 0 3617.7 13011 HARSYISF 8 81 980.4937037866672 979.4864273200672 1 982.4999267458916 MULTI CID FTMS 0 0 0 8125 162282.015625 0.9539882417324624 6 -0.3993988037109375 3 Unmodified _HARSYISF_ ENSG00000110619|ENST00000380525|CARS1;ENST00000439280.6_1_11:3050478-3078655:-|nuORF;ENST00000526890.5_1_11:3050224-3063461:-|nuORF;ENST00000531387.5_1_11:3022346-3069017:-|nuORF;nc|ENSG00000110619|P49589-2|CARS1;nc|ENSG00000110619|P49589|CARS1 18.13498045792455 0.6430038125133779 2 DATGA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 7 6 20.086 0.0 0.0 2.0507 0.0 0.0 271.1538851741053 0.0 271.1538851741053 0.0 0.4275135398928817 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.0 DATGA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 2.0507 - 874 1 1.995 61338.7 0.6399999856948853 4566 3560 8125 DOHH2_400M_050219_2,8128 DOHH2_400M_050219_2,8128,HARSYISF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8129 45.43 800.0 124620.0 25 0 11017.0 34336 SLSLLRVSW 9 120 530.8093623333732 1059.6041717335463 2 530.8092529177666 MULTI CID FTMS 0 0 0 8125 87159.1171875 1.0 0 0.0 4 Unmodified _SLSLLRVSW_ ENSG00000033100|ENST00000035307|CHPF2;nc|ENSG00000033100|Q9P2E5-2|CHPF2 4.3292370932331545 0.7635526921153418 2 Y 1 9 13.495 0.0 0.0 1.2736 0.0 0.0 878.5295237616698 0.0 878.5295237616698 0.0 1.712113404111033 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2736 - 51 + 1 1.995 78758.7 0.4600000083446502 4567 3560 8125 DOHH2_400M_050219_2,8129 DOHH2_400M_050219_2,8129,SLSLLRVSW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8131 45.436 76.0 868110.0 25 0 117730.0 + 10331 FSEIDLEKY 9 87 572.2835330619162 1142.5525131906322 2 572.2831909060478 MULTI CID FTMS 0 0 0 8130 638677.8125 0.992221637265299 2 -0.0824851989746093 1 Unmodified _FSEIDLEKY_ ENSG00000178700|ENST00000314636|DHFR2 70.33199760932243 0.0209706178985989 2 {M(Oxidation (M))|F}SE{I|L}D{I|L}EKY 9 0 + 84.435 0.0 0.0 7.39 7.39 88.104 0.0 0.0 0.0 14.09256854528806 6.690067809585756 6.690067809585756 6.690067809585756 0 0.7302046884880937 0.0 0.8494850021680094 0.3054621874040891 + + {M(Oxidation (M))|F}SE{I|L}D{I|L}EKY;{M(Oxidation (M))|F}SE{I|L}D{I|L}EYK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS][{M(Oxidation (M))|F}V]{I|L}ESE;{[TV]|[{I|L}S]}[HT]{I|L}D{I|L}ESE;{[MG]|[TS]}[H{I|L}]{I|L}D{I|L}ESE;[{I|L}T][HS]{I|L}D{I|L}ESE;{[TV]|[{I|L}S]}GY[{M(Oxidation (M))|F}V]{I|L}ESE;[YE]K[{M(Oxidation (M))|F}V]{I|L}ESE;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y[{M(Oxidation (M))|F}V]{I|L}ESE;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WK][HA]ESE 7.39;6.8045;4.9899;4.9391;4.3536;4.3273;4.2229;4.1932;4.0688;2.4277 +;-;-;-;-;-;-;-;-;- + 412 + 1 1.995 53510.5 1.0 4568 3561 8130 DOHH2_400M_050219_2,8131 DOHH2_400M_050219_2,8131,FSEIDLEKY True True FSEIDLEKY 45.435964 572.283190906048 3987142.75 8130.0 ENSG00000178700|ENST00000314636|DHFR2 7.802181402842204 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8132 45.439 153.0 389400.0 25 0 29628.0 + 11202 GENLPPLTY 9 91 502.2585636270432 1002.5025743208864 2 502.2585632205009 MULTI CID FTMS 0 0 0 8130 314467.71875 0.6220936130626857 13 -0.9490318298339844 2 Unmodified _GENLPPLTY_ ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1 55.50274090549119 0.0285720310785888 2 {[DA]|[EG]}N{I|L}PP{I|L}TY 9 0 + 43.259 0.0 0.0 4.3151 4.3151 69.736 0.0 0.0 0.0 3.1346584759892835 17.061085315034816 3.1346584759892835 0.5102999566398054 0 1.742992819099939 1.2218487496163564 0.0 0.0 + + {[DA]|[EG]}N{I|L}PP{I|L}TY;{[DA]|[EG]}GG{I|L}PP{I|L}TY;{[DA]|[EG]}NP{I|L}P{I|L}TY;{[DA]|[EG]}GGP{I|L}P{I|L}TY;[Y{M(Oxidation (M))|F}]S{I|L}P{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}G{I|L}PP{I|L}TY;[{I|L}P]P{[QG]|[NA]}D{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}GP{I|L}P{I|L}TY;[{I|L}P]P{[QG]|[NA]}{I|L}SEY;[{I|L}P]N{[DA]|[EG]}P{I|L}TY 4.3151;4.2642;3.465;3.4141;3.13;2.6941;2.0394;1.844;1.2767;1.2075 +;-;-;-;-;-;-;-;-;- + 238 1 1.995 51504.8 1.0 4569 3561 8130 DOHH2_400M_050219_2,8132 DOHH2_400M_050219_2,8132,GENLPPLTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8133 45.449 575.0 162910.0 25 0 14778.0 + 33155 SEVPGSIPNSW 11 122 586.7833105140554 1171.5520680949107 2 586.7833129763603 MULTI CID FTMS 0 0 0 8130 118464.46875 0.322805403809582 -4 0.0737266540527343 3 Unmodified _SEVPGSIPNSW_ ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-2|MLH1;nc|ENSG00000076242|P40692-3|MLH1 51.41523569358685 0.1097924807909074 2 {I|L}PNSW 5 6 32.891 0.0 0.0 2.8075 0.0 0.0 556.2494080380733 0.0 556.2494080380733 0.0 12.32644647810383 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.6643943297944485 + {I|L}PNSW 2.8075 + + 403 + 1 1.995 73863.5 1.0 4570 3561 8130 DOHH2_400M_050219_2,8133 DOHH2_400M_050219_2,8133,SEVPGSIPNSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8134 45.463 800.0 86735.0 25 0 6036.1 -1 0 83 1006.1462606308836 0 1006.14805907011 PEAK CID FTMS 0 0 0 8130 74420.296875 0.9772741495759756 -1 0.049285888671875 4 2 {I|L} 1 -1 6.9897 0.0 0.0 0.3477 0.0 0.0 1185.7673614943856 708.3948458307249 1894.1622073251103 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.3477 - 49 + 1 1.995 52765.5 0.4300000071525574 4571 3561 8130 DOHH2_400M_050219_2,8134 DOHH2_400M_050219_2,8134, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8136 45.479 800.0 106660.0 25 0 16919.0 + 27338 PHSSPLALL 9 122 467.7716192626435 933.5286855920872 2 467.7709228396416 MULTI CID FTMS 0 0 0 8135 89487.5859375 0.019237360899423 26 -1.5879554748535156 1 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 30.22481116460888 0.1466181017706357 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]PS{I|L}{I|L} 9 4 + 44.509 0.0 0.0 4.7678 4.7678 80.229 0.0 0.0 0.0 5.351876606898841 28.054914168102684 5.351876606898841 7.948445096549001 0 0.9247425010840048 0.0 1.0189301784845295 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]PS{I|L}{I|L};[TA][VP]HPS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA]PS{I|L}{I|L};{[TV]|[{I|L}S]}[PA]HPS{I|L}{I|L};[VP][TA]HPS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L};[PG][{I|L}T]HPS{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}[VS]S{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}T[TA]{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}A{[DS]|[MA]|[CV]|TT}{I|L}{I|L} 4.7678;3.9163;3.905;3.4112;3.3429;3.1617;3.1404;2.9884;2.7507;2.6659 -;-;-;-;-;-;-;-;-;- 433 1 1.995 70928.6 0.9700000286102296 4572 3562 8135 DOHH2_400M_050219_2,8136 DOHH2_400M_050219_2,8136,PHSSPLALL False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8137 45.493 800.0 379720.0 25 0 22496.0 -1 0 152 766.3695438883676 2296.0868022653026 3 766.7044555544853 MULTI CID FTMS 0 0 0 8135 213211.25 0.0615168010700819 -3 0.0858116149902343 2 2 [MT]GA[QA]QSQAGMTGYGM 17 -1 120.57 0.0 0.0 5.2513 0.0 0.0 0.0 622.3575291542276 622.3575291542276 83.21314162538809 0.0 0.0 0.0 0 4.123712505420023 0.0 3.600329725273209 0.2887254899964357 [MT]GA[QA]QSQAGMTGYGM 5.2513 - 133990 1 1.995 215916.2 0.7599999904632568 4573 3562 8135 DOHH2_400M_050219_2,8137 DOHH2_400M_050219_2,8137, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8138 45.499 338.0 230880.0 25 0 43304.0 37075 TGISVRKR 8 80 458.7883558189383 915.5621587046766 2 458.7879821658134 MULTI CID FTMS 0 0 0 8135 133750.359375 0.259072867861752 -2 0.0817756652832031 3 Unmodified _TGISVRKR_ ENSG00000164190|ENST00000282516|NIPBL;nc|ENSG00000164190|Q6KC79-2|NIPBL 0.6903765706972694 0.8201419426409876 2 P 1 8 0.088644 0.0 0.0 0.0096819 0.0 0.0 695.430625967175 120.05106531314686 815.4816912803219 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.0096819 - 1 + 1 1.995 65335.2 1.0 4574 3562 8135 DOHH2_400M_050219_2,8138 DOHH2_400M_050219_2,8138,TGISVRKR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8139 45.513 800.0 185130.0 25 0 17321.0 8358 ESAWGDEED 9 154 519.1882776284316 1036.362002323663 2 519.1887695193291 MULTI CID FTMS 0 0 0 8135 117284.6328125 0.7939328294660104 -1 0.0324897766113281 4 Unmodified _ESAWGDEED_ ENSG00000129946|ENST00000264554|SHC2 15.847184025352805 0.4077185912009129 2 {[ES]|[DT]|[{I|L}C]}AGTG{M(Oxidation (M))|F} 7 5 29.83 0.0 0.0 2.8783 0.0 0.0 0.0 384.069760507412 384.069760507412 7.026595898321499 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.4247425010840047 0.0 {[ES]|[DT]|[{I|L}C]}AGTG{M(Oxidation (M))|F} 2.8783 - 374 + 1 1.995 116045.9 0.5 4575 3562 8135 DOHH2_400M_050219_2,8139 DOHH2_400M_050219_2,8139,ESAWGDEED False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8141 45.529 800.0 95532.0 25 0 4305.4 25687 NHLLMMYWQSL 11 111 718.347913144646 1434.681273356092 2 718.3473998904228 MULTI CID FTMS 0 0 0 8140 93984.9453125 1.0 0 0.0 1 Unmodified _NHLLMMYWQSL_ nc|ENSG00000102053|Q5HYM0-2|ZC3H12B 8.745405648335112 0.8338865417133445 2 {[TV]|[{I|L}S]}HT{I|L}{M(Oxidation (M))|F}[WD]K{[C(Carbamidomethyl (C))E]|[WC]} 11 8 + 55.895 0.0 0.0 3.896 3.896 75.287 0.0 0.0 0.0 3.4678748622465605 14.937905657896572 3.4678748622465605 6.197887582883936 0 0.0 1.2218487496163564 2.1237125054200234 0.0 {[TV]|[{I|L}S]}HT{I|L}{M(Oxidation (M))|F}[WD]K{[C(Carbamidomethyl (C))E]|[WC]};[HT]VT{I|L}{M(Oxidation (M))|F}[WD]K{[C(Carbamidomethyl (C))E]|[WC]};{[TV]|[{I|L}S]}HT{I|L}M{[MG]|[TS]}EK{[C(Carbamidomethyl (C))E]|[WC]};{[TV]|[{I|L}S]}HT{I|L}M[WM]K{[C(Carbamidomethyl (C))E]|[WC]};[KS]{I|L}[WD]{M(Oxidation (M))|F}{I|L}TH{[C(Carbamidomethyl (C))E]|[WC]};[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]K[WD]{M(Oxidation (M))|F}{I|L}T[YR];[HT]VT{I|L}M{[MG]|[TS]}EK{[C(Carbamidomethyl (C))E]|[WC]};{[TV]|[{I|L}S]}HT{I|L}{M(Oxidation (M))|F}[DG]{[MS]|[{M(Oxidation (M))|F}A]}Q{[TV]|[{I|L}S]};[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]K[WD]{M(Oxidation (M))|F}{I|L}[YG]S{I|L};{[TV]|[{I|L}S]}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{M(Oxidation (M))|F}{I|L}TH{[C(Carbamidomethyl (C))E]|[WC]} 3.896;3.464;3.45;3.199;3.0995;3.0422;3.018;2.8505;2.8252;2.7725 -;-;-;-;-;-;-;-;-;- 904 1 1.995 59340.5 0.449999988079071 4576 3563 8140 DOHH2_400M_050219_2,8141 DOHH2_400M_050219_2,8141,NHLLMMYWQSL False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 8142 45.538 499.0 210960.0 25 0 14091.0 + 5397 DLKTKVLVL 9 115 514.8392726558736 1027.6639923785472 2 514.8395873904228 MULTI CID FTMS 0 0 0 8140 220753.46875 0.6140589116985165 -1 0.0499954223632812 2 Unmodified _DLKTKVLVL_ ENSG00000180104|ENST00000512944|EXOC3 57.24910588100465 0.0276051374632116 2 {[TV]|[{I|L}S]}K{I|L}KVEV{I|L} 9 3 + 59.435 0.0 0.0 5.7835 5.7835 78.592 0.0 0.0 0.0 2.243012119929091 30.273561666068005 2.243012119929091 2.768024924119672 0 0.805462187404089 0.0 0.5796896906561032 0.0 {[TV]|[{I|L}S]}K{I|L}KVEV{I|L};{[TV]|[{I|L}S]}K{I|L}KD{I|L}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}KTKV{I|L}V{I|L};{[TV]|[{I|L}S]}K{I|L}VKEV{I|L};[{I|L}V][KT]KVEV{I|L};{[TV]|[{I|L}S]}K{I|L}K{I|L}DV{I|L};[K{I|L}]S{I|L}KVEV{I|L};{[TV]|[{I|L}S]}K{I|L}KVD{I|L}{I|L};[{I|L}V][KT]KD{I|L}V{I|L};[{I|L}V]VKTKEV{I|L} 5.7835;5.5141;5.3136;5.2237;5.1479;5.0263;5.0263;4.9786;4.8785;4.8537 -;-;+;-;-;-;-;-;-;- + 1657 1 1.995 82508.4 1.0 4577 3563 8140 DOHH2_400M_050219_2,8142 DOHH2_400M_050219_2,8142,DLKTKVLVL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8143 45.552 800.0 159770.0 25 0 10817.0 + 38460 TSDELQFGY 9 132 530.2355223877913 1058.4564918423823 2 530.2359496951103 MULTI CID FTMS 0 0 0 8140 150041.203125 1.0 0 0.0 3 Unmodified _TSDELQFGY_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 57.47134341890925 0.0274820932774257 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ST{I|L}Q{M(Oxidation (M))|F}GY 9 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ST{I|L}Q + + 29.693 22.597 3.3562 2.8053 2.8053 48.567 0.0 0.0 0.0 0.0 7.095398342068098 0.0 0.0 0 0.5 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ST{I|L}Q{M(Oxidation (M))|F}GY 2.8053 - 367 + 1 1.995 99855.6 0.5699999928474426 4578 3563 8140 DOHH2_400M_050219_2,8143 DOHH2_400M_050219_2,8143,TSDELQFGY True True TSDELQFGY 45.551828 530.23594969511 708479.375 8140.0 nc|ENSG00000151348|Q93063-3|EXT2;;ENSG00000151348|ENST00000533608|EXT2;;nc|ENSG00000151348|Q93063-2|EXT2;;ENST00000528159.1_1_11:44228449-44265767:+|nuORF 6.484163125356038 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8144 45.563 636.0 138970.0 25 0 15627.0 + 32966 SELSSIQNL 9 120 495.7578691064586 989.5011852797172 2 495.7584716677666 MULTI CID FTMS 0 0 0 8140 150686.3125 1.0 0 0.0 4 Unmodified _SELSSIQNL_ ENSG00000112159|ENST00000369393|MDN1 85.35673624503755 0.0162188719545379 2 {NN|[MP]|[D{I|L}]|[EV]}QE{I|L} 5 6 33.281 0.0 0.0 3.3634 0.0 0.0 0.0 388.1805685578482 388.1805685578482 11.27853648249765 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.1549471895720984 0.5356668758921829 {NN|[MP]|[D{I|L}]|[EV]}QE{I|L} 3.3634 - 456 1 1.995 69954.3 1.0 4579 3563 8140 DOHH2_400M_050219_2,8144 DOHH2_400M_050219_2,8144,SELSSIQNL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8145 45.568 265.0 209270.0 25 0 38391.0 + 32951 SELNPNAEVW 10 79 579.7753398458776 1157.5361267585552 2 579.7756835818291 MULTI CID FTMS 0 0 0 8140 136310.375 0.4547278147850768 -1 0.0499954223632812 5 Unmodified _SELNPNAEVW_ ENSG00000107929|ENST00000316157|LARP4B 26.268140514670165 0.3785003716575977 2 [NP]AEV{[QS]|[NT]}EVW 10 6 + 41.872 0.0 0.0 3.6173 3.6173 71.981 0.0 0.0 0.0 5.440680443502757 8.947340481202062 5.440680443502757 3.7628749457997657 0 0.8182503180159344 0.0 0.0 1.305462187404089 [NP]AEV{[QS]|[NT]}EVW;[NP]AEN{[TV]|[{I|L}S]}EVW;{[QG]|[NA]}PEV{[QS]|[NT]}EVW;{[QG]|[NA]}PEN{[TV]|[{I|L}S]}EVW;[NP]AEGG{[TV]|[{I|L}S]}EVW;[R{M(Oxidation (M))|F}]E{[TV]|[{I|L}S]}N{[ET]|[MV]}Y;[R{M(Oxidation (M))|F}]E{[QS]|[NT]}V{[ET]|[MV]}Y;{[QG]|[NA]}PEGG{[TV]|[{I|L}S]}EVW;{[CP]|[EA]}[NP]V{[QS]|[NT]}EVW;{[CP]|[EA]}[NP]N{[TV]|[{I|L}S]}EVW 3.6173;3.2923;3.1473;2.8222;2.5005;2.0419;2.0381;2.0305;1.9975;1.6724 -;-;-;-;-;-;-;-;-;- 200 1 1.995 46314.9 1.0 4580 3563 8140 DOHH2_400M_050219_2,8145 DOHH2_400M_050219_2,8145,SELNPNAEVW False True SELNPNAEVW 45.567824 579.775683581829 2359365.25 8140.0 ENSG00000107929|ENST00000316157|LARP4B 5.312247117360433 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8146 45.582 800.0 113210.0 25 0 22121.0 + 28221 PQPLALRSMLL 11 84 619.8693554658943 1237.7241579985885 2 619.8690673708916 MULTI CID FTMS 0 0 0 8140 133099.4375 0.9388782020159558 -2 0.0824851989746093 6 Unmodified _PQPLALRSMLL_ REV__ENSG00000095752|ENST00000264563|IL11;REV__nc|ENSG00000095752|P20809-2|IL11 2.735195868890462 0.8622431031272658 2 Y 1 -1 11.42 0.0 0.0 0.92266 0.0 0.0 1056.64954054429 0.0 1056.64954054429 0.0 5.9354332167857216 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.92266 - 12 + 1 1.995 69579.5 0.5600000023841858 4581 3563 8140 DOHH2_400M_050219_2,8146 DOHH2_400M_050219_2,8146,PQPLALRSMLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8147 45.592 528.0 140420.0 25 0 19346.0 + 19118 LDVLKHSLY 9 113 544.3089661663242 1086.6033793994484 2 544.3094970583916 MULTI CID FTMS 0 0 0 8140 124150.96875 0.3160751204008636 18 -1.1605300903320312 7 Unmodified _LDVLKHSLY_ REV__ENSG00000130177|ENST00000356221|CDC16;REV__nc|ENSG00000130177|Q13042-2|CDC16;REV__nc|ENSG00000130177|Q13042-3|CDC16;REV__nc|ENSG00000130177|Q13042-4|CDC16 5.230669730166228 0.7320841359114558 2 Y 1 -1 13.495 0.0 0.0 1.2419 0.0 0.0 905.5286398748376 0.0 905.5286398748376 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2419 + + 81 + 1 1.995 60930.7 1.0 4582 3563 8140 DOHH2_400M_050219_2,8147 DOHH2_400M_050219_2,8147,LDVLKHSLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8148 45.606 800.0 96663.0 25 0 8293.9 + + 11444 NLDAVHDITVAY 12 104 665.8362851971684 1329.6580174611368 2 665.8371459841728 MULTI CID FTMS 0 0 0 8140 96177.1875 0.9444682573006776 -1 0.0499954223632812 8 Unmodified _GHYHTRQVVYA_ nc|ENSG00000172954|Q6UWP7|LCLAT1;ENSG00000172954|ENST00000379509|LCLAT1 15.248480904072842 0.7179608125786238 2 {[QV]|[N{I|L}]|[RA]|[KV]}{[DA]|[EG]}VHD{I|L}TVAY 12 -1 + 77.401 0.0 0.0 5.8211 5.8211 80.073 0.0 0.0 0.0 15.27544826290196 16.61181443446619 15.27544826290196 3.6015144778263704 0 1.0 1.6989700043360187 1.0 0.4650302283996909 {[QV]|[N{I|L}]|[RA]|[KV]}{[DA]|[EG]}VHD{I|L}TVAY;{[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}HD{I|L}TVAY;[HD]VAD{I|L}N{I|L}TVAY;[KA][YC(Carbamidomethyl (C))]KN{I|L}TVAY;[HD]VW{I|L}N{I|L}TVAY;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}AD{I|L}N{I|L}TVAY;{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T][C(Carbamidomethyl (C))R]{I|L}TVAY;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}W{I|L}N{I|L}TVAY;[HD]VP[C(Carbamidomethyl (C))R]{I|L}TVAY;{[QV]|[N{I|L}]|[RA]|[KV]}{[DA]|[EG]}VH{[TV]|[{I|L}S]}EVAY 5.8211;5.5502;4.6723;4.6313;4.6278;4.4233;4.3875;4.3789;4.2556;4.2411 -;-;-;-;-;-;-;-;-;- 2966 1 1.995 63855.0 0.449999988079071 4583 3563 8140 DOHH2_400M_050219_2,8148 DOHH2_400M_050219_2,8148,GHYHTRQVVYA False False NLDAVHDITVAY 45.605976 665.837145984173 699491.8125 8140.0 nc|ENSG00000172954|Q6UWP7|LCLAT1;;ENSG00000172954|ENST00000379509|LCLAT1 6.881954669952393 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8150 45.611 58.0 1104900.0 25 0 157220.0 + + -1 TLDFHTNTLY 10 74 613.290395585017 1224.566238236834 2 613.2899658083916 MULTI CID FTMS 0 0 0 8149 316800.90625 0.2997391186696938 2 -0.1745376586914062 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SLTHFDSTLY_ ENSG00000168702|ENST00000389484|LRP1B 15.847184025352805 0.5816416552707754 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T{I|L}[R{M(Oxidation (M))|F}][EC]Y 9 -1 + 27.029 0.0 0.0 2.2073 2.2073 68.038 0.0 0.0 0.0 11.54492794033978 3.5295435376151865 3.5295435376151865 3.0102999566398125 0 0.3054621874040891 0.0 0.6861818737241735 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T{I|L}[R{M(Oxidation (M))|F}][EC]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}T[R{M(Oxidation (M))|F}][EC]Y 2.2073;1.9614 -;- 27 + 1 1.995 53785.1 1.0 4584 3564 8149 DOHH2_400M_050219_2,8150 DOHH2_400M_050219_2,8150,SLTHFDSTLY False False TLDFHTNTLY 45.611253 613.2906 0.0 8149.0 ENSG00000168702|ENST00000389484|LRP1B 0.7802442709604899 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8151 45.614 160.0 263020.0 25 0 15699.0 + 4822 DEVERVITI 9 72 537.2956520756081 1072.5767512180162 2 537.2957641482353 MULTI CID FTMS 0 0 0 8149 263339.6875 0.2630223510334781 3 -0.1829757690429687 2 Unmodified _DEVERVITI_ ENSG00000231500|ENST00000439602|RPS18;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 29.84058131909904 0.1515068451768857 2 T{I|L} 2 7 25.459 0.0 0.0 2.3736 0.0 0.0 840.4336828359834 0.0 840.4336828359834 0.0 10.753800256993951 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 + T{I|L} 2.3736 + + 46 + 1 1.995 39467.7 1.0 4585 3564 8149 DOHH2_400M_050219_2,8151 DOHH2_400M_050219_2,8151,DEVERVITI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8152 45.617 128.0 365970.0 25 0 83543.0 30252 QWVRLLYR 8 62 567.3300059642745 1132.645458995349 2 567.3301269412041 MULTI CID FTMS 0 0 0 8149 526374.1875 0.4229163678829724 17 -1.0674400329589844 3 Unmodified _QWVRLLYR_ ENSG00000142530|ENST00000600100|GARIN5A;nc|ENSG00000142530|Q6IPT2-2|GARIN5A 0.7936320650641473 0.8195151834710337 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 40653.3 1.0 4586 3564 8149 DOHH2_400M_050219_2,8152 DOHH2_400M_050219_2,8152,QWVRLLYR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8153 45.621 177.0 283820.0 25 0 37134.0 + 8479 ETDEKDFYLY 10 80 661.7933340562329 1321.5721151792657 2 661.7928954958916 MULTI CID FTMS 0 0 0 8149 364238.4375 0.5143643995580279 -1 0.0930900573730468 4 Unmodified _ETDEKDFYLY_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 45.69961567697781 0.105390671673896 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{M(Oxidation (M))|F}[YE]Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 9 8 + 34.6 0.0 0.0 2.6181 2.6181 72.472 0.0 0.0 0.0 0.7077282964302114 1.5795332614348538 0.7077282964302114 6.433852901485302 0 0.5 0.0 1.424742501084005 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{M(Oxidation (M))|F}[YE]Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ET]|[MV]}N{I|L}{M(Oxidation (M))|F}[YE]Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[DP]WWVYY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ET]|[MV]}GG{I|L}{M(Oxidation (M))|F}[YE]Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[{M(Oxidation (M))|F}D]|MM}YWW{[ET]|[MV]}{I|L}Y;[DP]WWVN[DP]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 2.6181;2.1312;1.9061;1.4378;1.1389;0.9816 -;-;-;-;-;- 350 + 1 1.995 46202.0 1.0 4587 3564 8149 DOHH2_400M_050219_2,8153 DOHH2_400M_050219_2,8153,ETDEKDFYLY True True ETDEKDFYLY 45.620505 661.792895495892 4440942.5 8149.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 8.610129038492838 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8154 45.627 371.0 461160.0 25 0 47664.0 -1 0 109 969.4319837316668 2905.2741217952 3 970.1007568240166 MULTI CID FTMS 0 0 0 8149 340073.96875 1.0 0 0.0 5 2 GTMGAQS 7 -1 47.071 0.0 0.0 1.6202 0.0 0.0 1585.707136633774 684.2909539273878 2269.998090561162 0.0 0.0 0.0 0.0 0 0.5 0.0 1.7614393726401687 0.0 GTMGAQS 1.6202 - 1650 + 1 1.995 115049.7 1.0 4588 3564 8149 DOHH2_400M_050219_2,8154 DOHH2_400M_050219_2,8154, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8155 45.631 211.0 309330.0 25 0 59546.0 + 11326 GEYPSGINTW 10 90 562.2564890722284 1122.4984252112567 2 562.2567626833916 MULTI CID FTMS 0 0 0 8149 295688.40625 0.4891309056482711 -3 0.1755752563476562 6 Unmodified _GEYPSGINTW_ ENSG00000155508|ENST00000285896|CNOT8;ENST00000521583.5_1_5:154238316-154247291:+|nuORF;nc|ENSG00000155508|Q9UFF9-3|CNOT8 56.17704186161178 0.0466144807663799 2 [PS]G{I|L}YWNTW 9 5 [PS]G{I|L}YW + + 31.713 4.8173 0.68494 2.8252 2.8252 48.619 0.0 0.0 0.0 0.0 1.5000655322351264 0.0 0.0 0 0.4247425010840047 0.0 0.75 0.3054621874040891 [PS]G{I|L}YWNTW 2.8252 - 297 + 1 1.995 58786.7 1.0 4589 3564 8149 DOHH2_400M_050219_2,8155 DOHH2_400M_050219_2,8155,GEYPSGINTW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8156 45.64 476.0 727710.0 25 0 269420.0 -1 0 50 1149.05017167189 2296.08579041058 2 1149.551928699017 MULTI CID FTMS 0 0 0 8149 255820.90625 0.916053187079979 -1 0.0930900573730468 7 2 A 1 -1 6.9897 0.0 0.0 0.30442 0.0 0.0 901.40166062718 1320.6366671197875 2222.038327746968 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.30442 - 4 + 1 1.995 216150.5 1.0 4590 3564 8149 DOHH2_400M_050219_2,8156 DOHH2_400M_050219_2,8156, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8157 45.651 634.0 150450.0 25 0 18596.0 + 14196 IDKDLNRGL 9 114 522.2949282510854 1042.5753035689706 2 522.2948486208916 MULTI CID FTMS 0 0 0 8149 176275.515625 0.7000445903569661 2 -0.1745376586914062 8 Unmodified _IDKDLNRGL_ REV__ENSG00000136682|ENST00000259199|ZNG1B;REV__ENSG00000172785|ENST00000356521|ZNG1A;REV__ENST00000358604.7_1_2:114196636-114253317:+|nuORF;REV__ENST00000456188.5_1_2:114214762-114253317:+|nuORF;REV__ENST00000479583.5_1_2:114228547-114253317:+|nuORF;REV__ENST00000487575.6_1_9:121469-150531:-|nuORF;REV__nc|ENSG00000172785|Q9BRT8-2|ZNG1A;REV__nc|ENSG00000172785|Q9BRT8-3|ZNG1A 7.289230182591677 0.6602208344931196 2 {I|L} 1 -1 10.596 0.0 0.0 1.0163 0.0 0.0 911.4801325258052 0.0 911.4801325258052 0.0 8.606231995235856 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0163 + + 31 + 1 1.995 75503.0 1.0 4591 3564 8149 DOHH2_400M_050219_2,8157 DOHH2_400M_050219_2,8157,IDKDLNRGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8158 45.657 319.0 143900.0 25 0 22246.0 13396 HLKPVTLLTE 10 73 575.843230799288 1149.671908665376 2 575.8436157107353 MULTI CID FTMS 0 0 0 8149 165964.984375 0.3442810291533107 16 -1.046527862548828 9 Unmodified _HLKPVTLLTE_ ENSG00000172497|ENST00000307624|ACOT12;nc|ENSG00000172497|Q8WYK0-2|ACOT12 1.3295316138638542 0.7204866299213272 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 40543.6 1.0 4592 3564 8149 DOHH2_400M_050219_2,8158 DOHH2_400M_050219_2,8158,HLKPVTLLTE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8159 45.67 800.0 98487.0 25 0 6888.4 -1 0 92 771.701604593229 2312.082984379887 3 772.0355102419853 MULTI CID FTMS 0 0 0 8149 119589.6015625 1.0 0 0.0 10 2 {[SA]|[TG]}M[RN]GASQAGM 12 -1 31.685 0.0 0.0 1.3704 0.0 0.0 0.0 1147.5571195339337 1147.5571195339337 3.2420784358147614 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.2302046884880938 0.0 {[SA]|[TG]}M[RN]GASQAGM 1.3704 - 751 1 1.995 62562.3 0.5299999713897705 4593 3564 8149 DOHH2_400M_050219_2,8159 DOHH2_400M_050219_2,8159, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8160 45.683 699.0 180050.0 25 0 34569.0 + 15425 IPPPRHAPPVP 11 131 589.3434271203944 1176.672301307589 2 589.3434326052666 MULTI CID FTMS 0 0 0 8149 98896.0859375 0.0788225610714713 -6 0.2329063415527343 11 Unmodified _IPPPRHAPPVP_ REV__ENST00000336156.9_1_22:45592780-45592966:-|nuORF 3.5964929083625545 0.858179447565866 2 [KQ]NP 4 -1 13.188 0.0 0.0 1.1208 0.0 0.0 0.0 706.4116304986936 706.4116304986936 3.0065267629719017 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [KQ]NP 1.1208 - 32 + 1 1.995 97667.2 1.0 4594 3564 8149 DOHH2_400M_050219_2,8160 DOHH2_400M_050219_2,8160,IPPPRHAPPVP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8161 45.689 262.0 192480.0 25 0 19950.0 + 26396 NTDNLLTEY 9 98 541.7539066439351 1081.4932603546702 2 541.7535888552666 MULTI CID FTMS 0 0 0 8149 95702.984375 0.7436154600370145 -1 0.0930900573730468 12 Unmodified _NTDNLLTEY_ ENSG00000164151|ENST00000296564|ICE1;ENST00000505464.1_1_5:5423001-5437265:+|nuORF;ICE1|p.Y725Lfs*4|1|0.29|ENSG00000164151|chr5:5461508-5461508|A/-|frameshift_variant 27.628801355627647 0.1796483985696185 2 {[QS]|[NT]}DN{I|L} 5 4 20.942 0.0 0.0 1.9364 0.0 0.0 0.0 521.2248157532233 521.2248157532233 2.208814997277564 0.0 0.0 0.0 0 0.0 1.0 0.0 0.3494850021680094 + {[QS]|[NT]}DN{I|L} 1.9364 + + 109 1 1.995 44667.1 1.0 4595 3564 8149 DOHH2_400M_050219_2,8161 DOHH2_400M_050219_2,8161,NTDNLLTEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8162 45.703 800.0 85589.0 25 0 22112.0 20737 LLSLLDIVL 9 88 499.826869378856 997.639185824512 2 499.8272888064384 MULTI CID FTMS 0 0 0 8149 98907.015625 1.0 0 0.0 13 Unmodified _LLSLLDIVL_ ENSG00000180934|ENST00000641900|OR56A1;ENSG00000183389|ENST00000641156|OR56A4;ENSG00000184478|ENST00000641160|OR56A3;ENSG00000188691|ENST00000532411|OR56A5;nc|ENSG00000180934|Q8NGH5|OR56A1 18.13498045792455 0.3457906370836843 2 W 1 9 13.979 0.0 0.0 1.4012 0.0 0.0 793.5486229356434 0.0 793.5486229356434 0.0 -0.2507663609921486 -0.2507663609921486 0.0 0 0.0 0.0 0.0 0.0 W 1.4012 - 46 + 1 1.995 56620.2 0.4199999868869781 4596 3564 8149 DOHH2_400M_050219_2,8162 DOHH2_400M_050219_2,8162,LLSLLDIVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8163 45.717 800.0 99404.0 25 0 6335.3 -1 LMSLHEMF 8 115 512.2339622444475 1022.4533715556952 2 512.2336913943291 MULTI CID FTMS 0 0 0 8149 86248.875 1.0 0 0.0 14 Oxidation (M) _LM(Oxidation (M))SLHEMF_ ENSG00000113638|ENST00000337702|TTC33 14.581692164780916 0.6954967302934248 2 MP{[TV]|[{I|L}S]}C(Carbamidomethyl (C))PRY 8 -1 + 37.344 0.0 0.0 3.6524 3.6524 79.339 0.0 0.0 0.0 15.29290666384 11.313506577119623 11.313506577119623 9.262137858390812 0 0.0 1.0 0.0 0.0 MP{[TV]|[{I|L}S]}C(Carbamidomethyl (C))PRY;MP{[TV]|[{I|L}S]}[CG]PRY;MP{[TV]|[{I|L}S]}C(Carbamidomethyl (C))[MT]A{I|L};M{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YPRY;DDE[KT]PRY;M{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PYRY;DDVVC(Carbamidomethyl (C))PRY;EED[KS]PRY;M{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y[MT]A{I|L};M[YV]EYRY 3.6524;2.7465;2.4521;2.4367;1.9451;1.6494;1.6463;1.5241;1.5121;1.355 -;-;-;-;-;-;-;-;-;- 699 + 1 1.995 68936.7 0.4000000059604645 4597 3564 8149 DOHH2_400M_050219_2,8163 DOHH2_400M_050219_2,8163,LMSLHEMF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8164 45.721 143.0 250410.0 25 0 40127.0 42341 VTAPRRSL 8 74 450.2747646595719 898.5349763859438 2 451.2774230837822 MULTI CID FTMS 0 0 0 8149 162751.6875 1.0 0 0.0 15 Unmodified _VTAPRRSL_ ENSG00000132938|ENST00000612955|MTUS2 0.6903765706972694 0.8201419426409876 2 M 1 8 10.837 0.0 0.0 1.2061 0.0 0.0 749.4835522910204 0.0 749.4835522910204 0.0 0.7488116016666613 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.2061 - 7 + 1 1.995 33974.9 1.0 4598 3564 8149 DOHH2_400M_050219_2,8164 DOHH2_400M_050219_2,8164,VTAPRRSL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8166 45.728 177.0 330680.0 25 0 38629.0 + 33156 SEVPGSIPNSW 11 94 586.7833105140554 1171.5520680949107 2 586.7834960818291 MULTI CID FTMS 0 0 0 8165 366984.15625 1.0 0 0.0 1 Unmodified _SEVPGSIPNSW_ ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-2|MLH1;nc|ENSG00000076242|P40692-3|MLH1 51.41523569358685 0.1097924807909074 2 {I|L}PNSW 5 6 39.469 0.0 0.0 3.369 0.0 0.0 556.2492249326045 0.0 556.2492249326045 0.0 27.50630971391878 0.0 0.0 0 0.4247425010840047 0.0 0.6549471895720985 0.8494850021680094 + {I|L}PNSW 3.369 + + 167 + 1 1.995 50161.2 1.0 4599 3565 8165 DOHH2_400M_050219_2,8166 DOHH2_400M_050219_2,8166,SEVPGSIPNSW True True SEVPGSIPNSW 45.727891 586.783496081829 14673453.0 8165.0 nc|ENSG00000076242|P40692-2|MLH1;;ENSG00000076242|ENST00000231790|MLH1;;nc|ENSG00000076242|P40692-3|MLH1 7.188329537709554 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8167 45.735 406.0 229720.0 25 0 21615.0 + 451 AEFPDEPKW 9 100 559.7614572391299 1117.5083615450596 2 559.7615844607353 MULTI CID FTMS 0 0 0 8165 149549.46875 0.4965087805466139 1 -0.0598716735839843 2 Unmodified _AEFPDEPKW_ ENSG00000085377|ENST00000652536|PREP 36.506200033944 0.094635877243972 2 {[CP]|[EA]}{M(Oxidation (M))|F}PDEPKW 9 0 + 53.466 0.0 0.0 4.7844 4.7844 85.91 0.0 0.0 0.0 31.404243831634982 12.98332479720628 12.98332479720628 18.298122174395026 0 0.805462187404089 0.0 0.3807196863200844 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}PDEPKW;{[CP]|[EA]}{M(Oxidation (M))|F}PN[Q{I|L}]NW;{[CP]|[EA]}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}K{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}W;{[CP]|[EA]}{M(Oxidation (M))|F}PN[Q{I|L}]HY;{[CP]|[EA]}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}K{[YC]|[HE]}[PG];{[CP]|[EA]}{M(Oxidation (M))|F}PN[Q{I|L}]GGW;{[CP]|[EA]}{M(Oxidation (M))|F}PGG[Q{I|L}]NW;{[CP]|[EA]}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}K[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}PGG[Q{I|L}]HY;{[CP]|[EA]}{M(Oxidation (M))|F}{[ET]|[MV]}[HA]KW 4.7844;3.147;2.8776;2.6282;2.4097;2.323;2.323;2.1442;1.8042;1.7385 +;-;-;-;-;-;-;-;-;- + 361 + 1 1.995 76124.4 1.0 4600 3565 8165 DOHH2_400M_050219_2,8167 DOHH2_400M_050219_2,8167,AEFPDEPKW True True AEFPDEPKW 45.73515 559.761584460735 5440664.5 8165.0 ENSG00000085377|ENST00000652536|PREP 8.783583482106527 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8168 45.737 67.0 899110.0 25 0 151890.0 + 24568 MLFLVVKR 8 74 503.3174510849592 1004.6203492367184 2 503.3175842165947 MULTI CID FTMS 0 0 0 8165 705699.0 0.4898254105187154 -3 0.25775146484375 3 Unmodified _MLFLVVKR_ REV__ENST00000479285.5_1_1:114438325-114438811:-|nuORF 19.438996006549623 0.6237395211498085 2 M{I|L}{M(Oxidation (M))|F}KK 5 -1 64.508 0.0 0.0 6.4212 0.0 0.0 0.0 354.22345911197505 354.22345911197505 53.39902832107995 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 M{I|L}{M(Oxidation (M))|F}KK 6.4212 - 55 + 1 1.995 49990.5 1.0 4601 3565 8165 DOHH2_400M_050219_2,8168 DOHH2_400M_050219_2,8168,MLFLVVKR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8169 45.742 281.0 231690.0 25 0 29809.0 + 43923 YGGRGADY 8 83 429.6904750153112 857.3663970974224 2 429.6904174685478 MULTI CID FTMS 0 0 0 8165 288703.09375 0.7598650872284254 1 -0.0598716735839843 4 Unmodified _YGGRGADY_ REV__ENSG00000114503|ENST00000321256|NCBP2;REV__ENST00000463783.1_1_3:196663884-196664019:-|nuORF;REV__ENST00000467803.1_1_3:196662357-196664019:-|nuORF;REV__nc|ENSG00000114503|P52298-2|NCBP2;REV__nc|ENSG00000114503|P52298-3|NCBP2 5.760428011301431 0.7893668129297577 2 DY 2 -1 17.691 0.0 0.0 2.0634 0.0 0.0 561.2651225386318 0.0 561.2651225386318 0.0 10.70107520596089 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 DY 2.0634 + + 30 + 1 1.995 58153.8 1.0 4602 3565 8165 DOHH2_400M_050219_2,8169 DOHH2_400M_050219_2,8169,YGGRGADY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8170 45.75 450.0 138200.0 25 0 22948.0 42068 VQVRNPLNVR 10 81 597.856513248852 1193.698473564504 2 597.8563110232353 MULTI CID FTMS 0 0 0 8165 182624.796875 0.4361450540655533 -5 0.3395271301269531 5 Unmodified _VQVRNPLNVR_ ENSG00000128000|ENST00000434248|ZNF780B 1.4819007175156935 0.719781833666733 2 Y 1 10 11.42 0.0 0.0 0.95669 0.0 0.0 1012.6243291326664 0.0 1012.6243291326664 0.0 11.419983281826005 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.95669 - 2 + 1 1.995 52543.9 1.0 4603 3565 8165 DOHH2_400M_050219_2,8170 DOHH2_400M_050219_2,8170,VQVRNPLNVR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8171 45.758 456.0 209300.0 25 0 36616.0 -1 0 97 378.6999665809588 755.3853802287176 2 378.6997253298759 MULTI CID FTMS 0 0 0 8165 164894.515625 0.5651695907910966 -3 0.25775146484375 6 2 {[{M(Oxidation (M))|F}D]|MM}{I|L}SK{M(Oxidation (M))|F} 6 -1 + 35.277 0.0 0.0 4.67 4.67 84.981 0.0 0.0 0.0 22.40160273318921 11.682437647924218 11.682437647924218 15.650318544098386 0 0.3494850021680094 0.0 0.0 0.2396518287104437 {[{M(Oxidation (M))|F}D]|MM}{I|L}SK{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}{I|L}{M(Oxidation (M))|F}[KS] 4.67;2.5982 -;- 55 + 1 1.995 78596.5 1.0 4604 3565 8165 DOHH2_400M_050219_2,8171 DOHH2_400M_050219_2,8171, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8172 45.767 488.0 166710.0 25 0 21977.0 + 913 AEYPFSSEQKW 11 85 686.3155049590266 1370.6164569848531 2 686.3165771365166 MULTI CID FTMS 0 0 0 8165 138614.703125 0.8341864507600669 -1 0.1146659851074218 7 Unmodified _AEYPFSSEQKW_ ENSG00000017260|ENST00000510168|ATP2C1;nc|ENSG00000017260|P98194-2|ATP2C1;nc|ENSG00000017260|P98194-3|ATP2C1;nc|ENSG00000017260|P98194-4|ATP2C1;nc|ENSG00000017260|P98194-5|ATP2C1;nc|ENSG00000017260|P98194-6|ATP2C1;nc|ENSG00000017260|P98194-7|ATP2C1;nc|ENSG00000017260|P98194-8|ATP2C1;nc|ENSG00000017260|P98194-9|ATP2C1 51.487983226225225 0.1093896055713593 2 {[CP]|[EA]}YP{M(Oxidation (M))|F}SSEQKW 11 0 + 74.544 0.0 0.0 5.4387 5.4387 83.847 0.0 0.0 0.0 21.268732363855 12.350282991706656 12.350282991706656 9.128498242811006 0 0.9247425010840048 0.0 0.3494850021680094 0.7302046884880937 + + {[CP]|[EA]}YP{M(Oxidation (M))|F}SSEQKW;{[CP]|[EA]}YP{M(Oxidation (M))|F}SSE[AG]KW;{[CP]|[EA]}Y{[CT]|[{M(Oxidation (M))|F}G]}[DV]EQKW;{[CP]|[EA]}YP{M(Oxidation (M))|F}SSE[{M(Oxidation (M))|F}V]VP;{[CP]|[EA]}Y{[CT]|[{M(Oxidation (M))|F}G]}KQSEA{[QN]|[E{I|L}]|[KN]};{[CP]|[EA]}G{M(Oxidation (M))|F}Y[DV]EQKW;{[CP]|[EA]}YP{[TV]|[{I|L}S]}Y{[ES]|[DT]|[{I|L}C]}A{[QN]|[E{I|L}]|[KN]};{[CP]|[EA]}YP{M(Oxidation (M))|F}[Q{I|L}]{[{M(Oxidation (M))|F}D]|MM}{[QN]|[E{I|L}]|[KN]};{[CP]|[EA]}G{M(Oxidation (M))|F}YKQSEA{[QN]|[E{I|L}]|[KN]};{[CP]|[EA]}G{M(Oxidation (M))|F}KYQSEA{[QN]|[E{I|L}]|[KN]} 5.4387;4.7727;3.3616;3.0622;2.8375;2.4217;2.2023;1.9736;1.8976;1.678 +;-;-;-;-;-;-;-;-;- + 677 + 1 1.995 66779.5 1.0 4605 3565 8165 DOHH2_400M_050219_2,8172 DOHH2_400M_050219_2,8172,AEYPFSSEQKW True True AEYPFSSEQKW 45.766616 686.316577136517 1014284.25 8165.0 nc|ENSG00000017260|P98194-7|ATP2C1;;nc|ENSG00000017260|P98194-4|ATP2C1;;ENSG00000017260|ENST00000510168|ATP2C1;;nc|ENSG00000017260|P98194-2|ATP2C1;;nc|ENSG00000017260|P98194-9|ATP2C1;;nc|ENSG00000017260|P98194-3|ATP2C1;;nc|ENSG00000017260|P98194-6|ATP2C1;;nc|ENSG00000017260|P98194-5|ATP2C1;;nc|ENSG00000017260|P98194-8|ATP2C1 8.16228755315145 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8173 45.78 800.0 187590.0 25 0 10803.0 + + 34693 REIAPGLTGSEW 12 129 658.3361130148779 1314.6576730965558 2 658.3359252810478 MULTI CID FTMS 0 0 0 8165 124572.0859375 0.8309894674040488 -2 0.2077560424804687 8 Unmodified _SPTAQRDLLEW_ nc|ENSG00000110497|Q9C0C7-2|AMBRA1;nc|ENSG00000110497|Q9C0C7-5|AMBRA1;nc|ENSG00000110497|Q9C0C7-4|AMBRA1;ENSG00000110497|ENST00000683756|AMBRA1;nc|ENSG00000110497|Q9C0C7-6|AMBRA1;nc|ENSG00000110497|Q9C0C7-3|AMBRA1 38.17557092003332 0.2405003631267018 2 {[RE]|[WV]}{I|L}APG{I|L}TGSEW 12 -1 + 90.236 0.0 0.0 6.8639 6.8639 91.392 0.0 0.0 0.0 6.474359738055597 65.53858857874737 6.474359738055597 9.827796776480469 0 1.829689690656103 0.0 1.5356668758921828 0.3252574989159953 {[RE]|[WV]}{I|L}APG{I|L}TGSEW;{[RE]|[WV]}{I|L}APG{I|L}GTSEW;{[RE]|[WV]}{I|L}[QP]{I|L}TGSEW;{[SA]|[TG]}[{I|L}P]TPG{I|L}TGSE[VS];{[RE]|[WV]}{I|L}AP{[QV]|[N{I|L}]|[RA]|[KV]}TSEW;{[RE]|[WV]}{I|L}[QP]{I|L}GTSEW;{[RE]|[WV]}{I|L}APG{I|L}[MN]E[VS];{[ES]|[DT]|[{I|L}C]}GT[RK][HV]SEW;{[RE]|[WV]}{I|L}APG{I|L}T{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[DA]|[EG]};{[SA]|[TG]}[{I|L}P]TPG{I|L}GTSE[VS] 6.8639;6.1163;5.2035;4.5983;4.4894;4.4559;4.1428;3.9286;3.8619;3.8507 -;-;-;-;-;-;-;-;-;- 1362 1 1.995 110857.1 0.5400000214576721 4606 3565 8165 DOHH2_400M_050219_2,8173 DOHH2_400M_050219_2,8173,SPTAQRDLLEW False False REIAPGLTGSEW 45.780448 658.335925281048 931160.0625 8165.0 nc|ENSG00000110497|Q9C0C7-2|AMBRA1;;nc|ENSG00000110497|Q9C0C7-5|AMBRA1;;nc|ENSG00000110497|Q9C0C7-4|AMBRA1;;ENSG00000110497|ENST00000683756|AMBRA1;;nc|ENSG00000110497|Q9C0C7-6|AMBRA1;;nc|ENSG00000110497|Q9C0C7-3|AMBRA1 9.012221654256184 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8175 45.786 39.0 1589900.0 25 0 117970.0 -1 0 68 766.3695438883676 2296.0868022653026 3 766.7042724490166 MULTI CID FTMS 0 0 0 8174 1984422.25 0.5725556638887228 1 -0.0084381103515625 1 2 AGMTGYGM 8 -1 49.686 0.0 0.0 2.1639 0.0 0.0 902.40059728659 622.3694828206075 1524.7700801071976 0.0 0.0 0.0 0.0 0 2.004432191740108 0.0 0.0 0.0 AGMTGYGM 2.1639 - 227 + 1 1.995 52349.1 1.0 4607 3566 8174 DOHH2_400M_050219_2,8175 DOHH2_400M_050219_2,8175, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8176 45.789 171.0 268500.0 25 0 49888.0 + 27487 PKGRAKLF 8 63 458.7883558189383 915.5621587046766 2 458.7880126833916 MULTI CID FTMS 0 0 0 8174 334412.4375 0.6477529453872836 2 -0.0654792785644531 2 Unmodified _PKGRAKLF_ REV__ENST00000425103.5_1_4:6883046-6883184:+|nuORF 0.6903765706972694 0.8201419426409876 2 D 1 -1 5.4846 0.0 0.0 0.59904 0.0 0.0 580.4011307279172 217.10946069888908 797.5105914268063 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.59904 - 1 + 1 1.995 42409.4 1.0 4608 3566 8174 DOHH2_400M_050219_2,8176 DOHH2_400M_050219_2,8176,PKGRAKLF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8178 45.795 178.0 314410.0 25 0 75388.0 37348 TKEVNSGFFY 10 66 596.2879796541974 1190.5614063751948 2 596.2877685427666 MULTI CID FTMS 0 0 0 8177 390997.78125 0.2729804502824116 -2 0.0683097839355468 1 Unmodified _TKEVNSGFFY_ nc|ENSG00000132141|Q92526-3|CCT6B 47.594388314883695 0.0942698883389255 2 N[SG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 6 4 53.945 0.0 0.0 4.5311 0.0 0.0 457.25340468574376 0.0 457.25340468574376 0.0 41.03794667124717 0.0 0.0 0 1.0 0.0 1.1549471895720984 0.8494850021680094 + N[SG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 4.5311 + + 149 1 1.995 48526.5 1.0 4609 3567 8177 DOHH2_400M_050219_2,8178 DOHH2_400M_050219_2,8178,TKEVNSGFFY True True KTEVNSGFFY 45.794895 596.287768542767 18582426.0 8177.0 ENSG00000146731|ENST00000275603|CCT6A;;ENSG00000132141|ENST00000314144|CCT6B;;ENST00000482776.1_1_7:56124009-56126486:+|nuORF;;nc|ENSG00000132141|Q92526-2|CCT6B;;nc|ENSG00000146731|P40227-2|CCT6A 4.981300354003906 2.0 False 10.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 8179 45.799 191.0 263320.0 25 0 28283.0 + 41824 VPYEKGFAL 9 77 512.2793426127738 1022.5441322923476 2 512.2792846560478 MULTI CID FTMS 0 0 0 8177 267179.71875 0.4073909542279359 -2 0.0683097839355468 2 Unmodified _VPYEKGFAL_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 24.020572477871973 0.2255576514309169 2 VPYE 4 5 52.735 0.0 0.0 5.1572 0.0 0.0 0.0 531.2943758510073 531.2943758510073 34.151603310239906 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + VPYE 5.1572 + + 77 + 1 1.995 46901.7 1.0 4610 3567 8177 DOHH2_400M_050219_2,8179 DOHH2_400M_050219_2,8179,VPYEKGFAL False True VPYEKGFAL 45.798579 512.279284656048 13559209.5 8177.0 ENST00000548375.5_1_12:96405582-96408866:-|nuORF;;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;;nc|ENSG00000111144|P09960-4|LTA4H;;nc|ENSG00000111144|P09960-2|LTA4H;;nc|ENSG00000111144|P09960-3|LTA4H;;ENSG00000111144|ENST00000228740|LTA4H 8.208333492279053 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8180 45.801 89.0 525870.0 25 0 87586.0 + 7812 GEYPSGINTW 10 77 562.3031875853542 1122.5918222375085 2 562.3035156130791 MULTI CID FTMS 0 0 0 8177 228337.90625 1.0 0 0.0 3 Unmodified _ELITPFQLY_ ENST00000521583.5_1_5:154238316-154247291:+|nuORF;ENSG00000155508|ENST00000285896|CNOT8;nc|ENSG00000155508|Q9UFF9-3|CNOT8 26.88365393820708 0.1891292719743517 2 {I|L}Y 2 7 24.776 0.0 0.0 2.2071 0.0 0.0 828.4321156232437 0.0 828.4321156232437 0.0 3.8818126275826543 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {I|L}Y 2.2071 + + 178 1 1.995 40184.3 1.0 4611 3567 8177 DOHH2_400M_050219_2,8180 DOHH2_400M_050219_2,8180,ELITPFQLY False False GEYPSGINTW 45.800554 562.2566 9482702.0 8177.0 ENST00000521583.5_1_5:154238316-154247291:+|nuORF;;ENSG00000155508|ENST00000285896|CNOT8;;nc|ENSG00000155508|Q9UFF9-3|CNOT8 5.566152095794678 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8181 45.814 800.0 132530.0 25 0 14320.0 + 42112 VRNNVIIVM 9 110 529.3130492486487 1056.6115455640972 2 529.3131591677666 MULTI CID FTMS 0 0 0 8177 166841.921875 1.0 0 0.0 4 Unmodified _VRNNVIIVM_ ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF 32.30548876998284 0.1201446275138228 2 V{I|L}{I|L}VM 5 4 45.815 0.0 0.0 4.3361 0.0 0.0 483.256151267775 0.0 483.256151267775 0.0 16.81917438353821 0.0 0.0 0 1.325257498915995 0.0 0.0 0.0 + V{I|L}{I|L}VM 4.3361 + + 253 1 1.995 88978.5 0.5899999737739563 4612 3567 8177 DOHH2_400M_050219_2,8181 DOHH2_400M_050219_2,8181,VRNNVIIVM True True VRNNVIIVM 45.814397 529.313159167767 861917.25 8177.0 ENSG00000151503|ENST00000534548|NCAPD3;;ENST00000525964.6_1_11:134022841-134052943:-|nuORF 6.4683834711710615 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8182 45.825 617.0 143290.0 25 0 13816.0 + 32878 SEIEGIQSL 9 127 488.2534234233975 974.4922939135952 2 488.2535278201103 MULTI CID FTMS 0 0 0 8177 139904.375 0.8583842564427137 -1 0.0084381103515625 5 Unmodified _SEIEGIQSL_ ENSG00000104880|ENST00000668164|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18 92.8221339359638 0.0138398038803217 2 {[TV]|[{I|L}S]}EEG{I|L}QS{I|L} 9 2 {[TV]|[{I|L}S]}EEG{I|L} + + 36.022 29.473 4.6908 3.6965 3.6965 50.773 0.0 0.0 0.0 0.0 17.992953198672268 0.0 0.0 0 0.5 0.0 0.8252574989159953 0.3807196863200844 {[TV]|[{I|L}S]}EEG{I|L}QS{I|L} 3.6965 - 264 + 1 1.995 72672.2 1.0 4613 3567 8177 DOHH2_400M_050219_2,8182 DOHH2_400M_050219_2,8182,SEIEGIQSL True True SEIEGIQSL 45.825166 488.25352782011 907068.375 8177.0 nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18;;nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18;;ENSG00000104880|ENST00000668164|ARHGEF18;;nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18;;nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18 4.773934364318848 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8183 45.832 385.0 94539.0 25 0 10022.0 + 19557 LFRERKPAF 9 61 582.3354365633785 1162.656320193557 2 582.3358642458916 MULTI CID FTMS 0 0 0 8177 138051.671875 0.3677170008453659 -2 0.0683097839355468 6 Unmodified _LFRERKPAF_ REV__ENST00000580900.5_2_9:21837935-21854639:+|nuORF 2.302733041254933 0.8342969208511092 2 Y 1 -1 13.495 0.0 0.0 1.1607 0.0 0.0 981.5821452441412 0.0 981.5821452441412 0.0 10.395906230238126 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1607 - 7 + 1 1.995 31435.8 1.0 4614 3567 8177 DOHH2_400M_050219_2,8183 DOHH2_400M_050219_2,8183,LFRERKPAF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8184 45.846 800.0 77813.0 25 0 4758.9 + 5398 DLKTKVLVL 9 108 514.8392726558736 1027.6639923785472 2 514.8392211794853 MULTI CID FTMS 0 0 0 8177 111098.96875 0.3090384591814142 3 -0.2454948425292968 7 Unmodified _DLKTKVLVL_ ENSG00000180104|ENST00000512944|EXOC3 38.61474834105838 0.0830609365873449 2 [{I|L}V][KT]KVEV{I|L} 9 2 + 41.848 0.0 0.0 4.0722 4.0722 70.014 0.0 0.0 0.0 5.932044273317487 9.172356950594676 5.932044273317487 1.2763625255165252 0 0.75 1.154901959985743 0.0 0.0 [{I|L}V][KT]KVEV{I|L};[{I|L}V][KT]KD{I|L}V{I|L};[{I|L}V][KT]VKEV{I|L};{[TV]|[{I|L}S]}[K{I|L}]KVEV{I|L};{[TV]|[{I|L}S]}[K{I|L}]KD{I|L}V{I|L};{[TV]|[{I|L}S]}[K{I|L}]VKEV{I|L};[KT][{I|L}V]KVEV{I|L};[KT][{I|L}V]KD{I|L}V{I|L};[{I|L}V][KT]V[SG]{I|L}V{I|L};[KT][{I|L}V]VKEV{I|L} 4.0722;3.948;3.4863;3.4127;3.2885;2.8268;2.6554;2.5312;2.4661;2.0696 -;-;-;-;-;-;-;-;-;- 397 1 1.995 54497.7 0.4699999988079071 4615 3567 8177 DOHH2_400M_050219_2,8184 DOHH2_400M_050219_2,8184,DLKTKVLVL True True DLKTKVLVL 45.845916 514.839221179485 2274657.0 8177.0 ENSG00000180104|ENST00000512944|EXOC3 3.924816687901815 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8186 45.859 584.0 137020.0 25 0 15969.0 + 32952 SELNPNAEVW 10 97 579.7753398458776 1157.5361267585552 2 579.7759277224541 MULTI CID FTMS 0 0 0 8185 102906.71875 0.3432940988086195 4 -0.4027252197265625 1 Unmodified _SELNPNAEVW_ ENSG00000107929|ENST00000316157|LARP4B 26.268140514670165 0.3785003716575977 2 [NP]ATV{M(Oxidation (M))|F}A{M(Oxidation (M))|F}EY 10 9 + 41.023 0.0 0.0 3.544 3.544 71.942 0.0 0.0 0.0 1.7136878416241783 10.282533672448668 1.7136878416241783 3.969127807875857 0 0.0 0.0 0.0 0.6109243748081782 [NP]ATV{M(Oxidation (M))|F}A{M(Oxidation (M))|F}EY;{[QV]|[N{I|L}]|[RA]|[KV]}{[ES]|[DT]|[{I|L}C]}WA{M(Oxidation (M))|F}EY;{[ES]|[DT]|[{I|L}C]}{I|L}N[VS]A{M(Oxidation (M))|F}EY;[R{M(Oxidation (M))|F}]E{[QS]|[NT]}VTEY;[R{M(Oxidation (M))|F}]E{[TV]|[{I|L}S]}NTEY;[NP]AEV{[QS]|[NT]}EVW;[NP]AEN{[TV]|[{I|L}S]}EVW;{[ES]|[DT]|[{I|L}C]}{I|L}GG[VS]A{M(Oxidation (M))|F}EY;[R{M(Oxidation (M))|F}][{I|L}T]DNTEY;[R{M(Oxidation (M))|F}]E{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VW 3.544;3.2011;2.9243;2.4898;2.2297;2.2161;1.956;1.8306;1.6711;1.669 -;-;-;-;-;-;-;-;-;- 769 1 1.995 67308.1 1.0 4616 3568 8185 DOHH2_400M_050219_2,8186 DOHH2_400M_050219_2,8186,SELNPNAEVW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8187 45.862 184.0 307170.0 25 0 54474.0 + + 1112 ARGPIQIL 8 84 434.2744419207558 866.5343309083116 2 434.2743713259697 MULTI CID FTMS 0 0 0 8185 260207.0625 0.1315858541207865 -2 0.0654792785644531 2 Unmodified _AGPRLQLL_ ENSG00000047315|ENST00000314595|POLR2B 19.438996006549623 0.6237395211498085 2 Q{I|L}{I|L} 3 -1 27.435 0.0 0.0 3.1661 0.0 0.0 494.29707447020417 0.0 494.29707447020417 0.0 11.95046257204389 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Q{I|L}{I|L} 3.1661 + + 24 1 1.995 50935.0 1.0 4617 3568 8185 DOHH2_400M_050219_2,8187 DOHH2_400M_050219_2,8187,AGPRLQLL False False ARGPIQIL 45.862239 434.27437132597 28814726.0 8185.0 ENSG00000047315|ENST00000314595|POLR2B 1.816180149714152 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8188 45.867 279.0 267710.0 25 0 35220.0 + 6178 DTDISLIRY 9 74 548.2873821760077 1094.5602114188152 2 548.2872802615166 MULTI CID FTMS 0 0 0 8185 180512.296875 0.197903865975037 -1 0.0570411682128906 3 Unmodified _DTDISLIRY_ ENSG00000101158|ENST00000652272|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;nc|ENSG00000101158|Q8IXH7|NELFCD 60.07390631473393 0.0260411565414776 2 {[ES]|[DT]|[{I|L}C]}D{I|L}S{I|L}{I|L}RY 9 0 + 57.56 0.0 0.0 5.2587 5.2587 89.298 0.0 0.0 0.0 44.46063146421345 8.992887666437142 8.992887666437142 33.979400086720375 0 1.048455006504028 0.0 0.0 0.3252574989159953 + + {[ES]|[DT]|[{I|L}C]}D{I|L}S{I|L}{I|L}RY;{[ES]|[DT]|[{I|L}C]}Y[HK]{I|L}RY 5.2587;2.1543 +;- + 130 + 1 1.995 63303.7 1.0 4618 3568 8185 DOHH2_400M_050219_2,8188 DOHH2_400M_050219_2,8188,DTDISLIRY True True DTDISLIRY 45.867393 548.287280261517 5776097.5 8185.0 ENST00000474543.5_1_20:57564608-57568882:+|nuORF;;nc|ENSG00000101158|Q8IXH7|NELFCD;;ENSG00000101158|ENST00000652272|NELFCD 5.779422124226888 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8189 45.879 677.0 250620.0 25 0 19689.0 + 8729 EVLQRIESL 9 147 543.8101903759791 1085.605827818758 2 543.8113281130791 MULTI CID FTMS 0 0 0 8185 151015.96875 0.3937853519842255 -1 0.0570411682128906 4 Unmodified _EVLQRIESL_ ENSG00000182185|ENST00000471583|RAD51B;ENST00000474051.1_1_14:68352547-68354002:+|nuORF;ENST00000553595.5_1_14:68331761-69149671:+|nuORF;nc|ENSG00000182185|O15315-1|RAD51B;nc|ENSG00000182185|O15315-4|RAD51B;nc|ENSG00000182185|O15315-5|RAD51B;nc|ENSG00000182185|O15315|RAD51B 96.36657018975838 0.0123932121270252 2 {NN|[MP]|[D{I|L}]|[EV]}TRQ{I|L}{I|L}D{I|L} 9 5 + 70.17 0.0 0.0 6.4637 6.4637 82.245 0.0 0.0 0.0 6.875758612822061 14.973024840566474 6.875758612822061 3.679067360440612 0 0.5 2.0 2.033428165228951 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}TRQ{I|L}{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}TR{I|L}Q{I|L}D{I|L};{[TV]|[{I|L}S]}ERQ{I|L}{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}TRQ{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}TR[AG]{I|L}{I|L}D{I|L};{[TV]|[{I|L}S]}ER{I|L}Q{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}TR{I|L}QVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}TR{I|L}[AG]{I|L}D{I|L};{[TV]|[{I|L}S]}ERQ{I|L}VE{I|L};{[TV]|[{I|L}S]}ER[AG]{I|L}{I|L}D{I|L} 6.4637;6.1248;5.8303;5.6588;5.6155;5.4914;5.3199;5.2766;5.0255;4.9821 -;-;-;-;-;-;-;-;-;- 3589 1 1.995 131836.3 1.0 4619 3568 8185 DOHH2_400M_050219_2,8189 DOHH2_400M_050219_2,8189,EVLQRIESL True True EVLQRIESL 45.87917 543.811328113079 2208540.25 8185.0 nc|ENSG00000182185|O15315-5|RAD51B;;nc|ENSG00000182185|O15315-1|RAD51B;;nc|ENSG00000182185|O15315-4|RAD51B;;ENST00000474051.1_1_14:68352547-68354002:+|nuORF;;ENST00000553595.5_1_14:68331761-69149671:+|nuORF;;ENSG00000182185|ENST00000471583|RAD51B;;nc|ENSG00000182185|O15315|RAD51B 5.215952396392822 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8190 45.893 800.0 169810.0 25 0 9893.6 + 8530 ETEQTKFWDY 10 141 673.7989507071294 1345.5833484810587 2 673.7991210818291 MULTI CID FTMS 0 0 0 8185 101897.9921875 0.3866624613765706 -1 0.0570411682128906 5 Unmodified _ETEQTKFWDY_ ENSG00000196968|ENST00000372841|FUT11 107.5634045930896 0.0042230779264997 2 [DP]EQTK{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}DY 11 4 + 80.759 0.0 0.0 6.0017 6.0017 79.152 0.0 0.0 0.0 8.898777816235409 8.898777816235409 8.898777816235409 2.544321917401078 0 1.0 1.2218487496163564 2.605627050040693 0.3054621874040891 [DP]EQTK{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}DY;[DP]EQTK{M(Oxidation (M))|F}A[{M(Oxidation (M))|F}T]Y;[DP]EQT[RH]WDY;[DP]QETK{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}DY;[QA]C(Carbamidomethyl (C))QTK{M(Oxidation (M))|F}WDY;[DP]QETK{M(Oxidation (M))|F}A[{M(Oxidation (M))|F}T]Y;[DP]QET[RH]WDY;[DP]E[AG]TK{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}DY;{[ET]|[MV]}EQTK{M(Oxidation (M))|F}WDY;[DP]E[AG]TK{M(Oxidation (M))|F}A[{M(Oxidation (M))|F}T]Y 6.0017;5.8127;5.6557;5.5163;5.3404;5.3272;5.1703;5.0963;5.0715;4.9072 -;-;-;-;-;-;-;-;+;- + 11867 1 1.995 103576.0 0.4900000095367431 4620 3568 8185 DOHH2_400M_050219_2,8190 DOHH2_400M_050219_2,8190,ETEQTKFWDY True True ETEQTKFWDY 45.893015 673.799121081829 1581713.875 8185.0 ENSG00000196968|ENST00000372841|FUT11 9.148555119832356 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8191 45.907 800.0 133810.0 25 0 26224.0 + 10428 FTDPGMGNLTY 11 113 608.2717544878108 0 608.2717773318291 PEAK CID FTMS 0 0 0 8185 92156.484375 1.0 0 0.0 6 Unmodified _FTDPGMGNLTY_ ENSG00000134569|ENST00000378623|LRP4 36.506200033944 0.163641010201298 2 {I|L}AE{I|L}QEK 7 11 17.528 0.0 0.0 1.4432 0.0 0.0 198.9980855363652 201.0672854059204 400.0653709422856 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 {I|L}AE{I|L}QEK 1.4432 - 238 + 1 1.995 81034.5 0.4699999988079071 4621 3568 8185 DOHH2_400M_050219_2,8191 DOHH2_400M_050219_2,8191,FTDPGMGNLTY False True FTDPGMGNLTY 45.906849 608.271777331829 577459.4375 8185.0 ENSG00000134569|ENST00000378623|LRP4 5.34252421061198 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8192 45.921 800.0 78977.0 25 0 5303.8 8283 EQLKISPDAW 10 115 593.8073498096373 1185.6001466860746 2 593.8056518435478 MULTI CID FTMS 0 0 0 8185 91631.1015625 0.716866711398583 2 -0.1884536743164062 7 Unmodified _EQLKISPDAW_ ENSG00000184575|ENST00000332707|XPOT 20.41453444215458 0.5050059513928961 2 V{I|L}AW 4 7 36.938 0.0 0.0 3.1156 0.0 0.0 698.3148420405774 0.0 698.3148420405774 0.0 21.453650195120844 0.0 0.0 0 0.5 0.0 0.0 0.0 V{I|L}AW 3.1156 - 90 1 1.995 53978.8 0.4600000083446502 4622 3568 8185 DOHH2_400M_050219_2,8192 DOHH2_400M_050219_2,8192,EQLKISPDAW False True EEFRHVIAW 45.92068 593.805651843548 817205.25 8185.0 ENSG00000117036|ENST00000368192|ETV3;;nc|ENSG00000117036|P41162-2|ETV3;;ENSG00000253831|ENST00000454449|ETV3L;;ENST00000460850.1_1_1:157105261-157106150:-|nuORF 0.198747436205546 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8193 45.925 115.0 430440.0 25 0 65160.0 8451 ESRKELELK 9 74 566.3218158295025 1130.629078725805 2 566.3221313357353 MULTI CID FTMS 0 0 0 8185 247730.5 0.7214303427746404 -1 0.0570411682128906 8 Unmodified _ESRKELELK_ ENSG00000127914|ENST00000356239|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-4|AKAP9;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 3.944395688203298 0.7769873103969335 2 R 1 8 1.5938 0.0 0.0 0.14097 0.0 0.0 758.4504115888893 213.0518740289672 971.5022856178564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.14097 + + 5 + 1 1.995 40540.8 1.0 4623 3568 8185 DOHH2_400M_050219_2,8193 DOHH2_400M_050219_2,8193,ESRKELELK False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8194 45.935 621.0 151180.0 25 0 13244.0 23808 LVDVPFPNSY 10 117 575.7933555647132 1149.5721581962264 2 575.7933227419853 MULTI CID FTMS 0 0 0 8185 128434.8984375 1.0 0 0.0 9 Unmodified _LVDVPFPNSY_ ENSG00000150471|ENST00000683033|ADGRL3;nc|ENSG00000150471|Q9HAR2-2|ADGRL3;nc|ENSG00000150471|Q9HAR2-3|ADGRL3;nc|ENSG00000150471|Q9HAR2-4|ADGRL3;nc|ENSG00000150471|Q9HAR2|ADGRL3 16.149105407346934 0.5765757077271437 2 V{I|L}DVY{I|L}EHY 9 7 + 95.117 0.0 0.0 8.2742 8.2742 87.561 0.0 0.0 0.0 36.47817481888637 5.006023505691843 5.006023505691843 5.006023505691843 0 0.805462187404089 2.0 0.75 0.0 V{I|L}DVY{I|L}EHY;V{I|L}DVY{I|L}EYH;V{I|L}DVY[CS][{I|L}A][PA];V{I|L}D[{M(Oxidation (M))|F}T][KQ]HY;V{I|L}D[{M(Oxidation (M))|F}T][KQ]YH;V{I|L}DV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[Y{I|L}][PA];[{I|L}V]N{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[RE]|[WV]}[EP] 8.2742;7.8387;4.7258;4.4682;4.0328;4.024;1.3797 -;-;-;-;-;-;- 281 + 1 1.995 78211.8 1.0 4624 3568 8185 DOHH2_400M_050219_2,8194 DOHH2_400M_050219_2,8194,LVDVPFPNSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8195 45.949 800.0 61589.0 25 0 10240.0 + 17503 KPGVTHIIFRA 11 82 619.8693554658943 1237.7241579985885 2 619.8694946169853 MULTI CID FTMS 0 0 0 8185 100847.734375 0.7113759554947984 3 -0.2852821350097656 10 Unmodified _KPGVTHIIFRA_ REV__ENSG00000196505|ENST00000369443|GDAP2;REV__ENST00000369442.3_1_1:118455226-118455283:-|nuORF;REV__ENST00000493555.5_1_1:118439453-118462815:-|nuORF;REV__nc|ENSG00000196505|Q9NXN4-2|GDAP2 2.735195868890462 0.8622431031272658 2 Y 1 -1 11.109 0.0 0.0 0.89755 0.0 0.0 1056.6499372728056 0.0 1056.6499372728056 0.0 0.651668842475031 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.89755 - 18 + 1 1.995 42716.9 0.4600000083446502 4625 3568 8185 DOHH2_400M_050219_2,8195 DOHH2_400M_050219_2,8195,KPGVTHIIFRA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8197 45.954 46.0 974190.0 25 0 204730.0 + -1 WQLTMKKKV 9 71 589.3434271203944 1176.672301307589 2 589.3431884646416 MULTI CID FTMS 0 0 0 8196 1157275.125 0.9223761319983446 -1 0.1033248901367187 1 Oxidation (M) _WQLTM(Oxidation (M))KKKV_ REV__ENST00000466094.5_1_7:107220736-107227893:+|nuORF;REV__ENST00000486326.5_1_7:107220736-107234551:+|nuORF 0.6014990680409731 0.8936861360942873 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 39346.2 1.0 4626 3569 8196 DOHH2_400M_050219_2,8197 DOHH2_400M_050219_2,8197,WQLTMKKKV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8198 45.957 136.0 273940.0 25 0 40467.0 -1 EGQKDMITW 9 83 562.2564890722284 1122.4984252112567 2 562.2566406130791 MULTI CID FTMS 0 0 0 8196 229859.515625 0.3802360548234352 2 -0.1819572448730468 2 Oxidation (M) _EGQKDM(Oxidation (M))ITW_ ENSG00000159459|ENST00000290650|UBR1;ENST00000564540.5_1_15:43313466-43317626:-|nuORF 12.531546534597751 0.4974689918368763 2 TW 2 -1 17.251 0.0 0.0 1.5368 0.0 0.0 817.3609262872318 0.0 817.3609262872318 0.0 -0.72051538364164 -0.72051538364164 0.0 0 0.0 0.0 0.3807196863200844 0.0 TW 1.5368 + + 81 + 1 1.995 34335.3 1.0 4627 3569 8196 DOHH2_400M_050219_2,8198 DOHH2_400M_050219_2,8198,EGQKDMITW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8199 45.96 126.0 409540.0 25 0 54277.0 + 16630 KEIDMLLKEY 10 81 641.3415990672518 1280.6686452013034 2 641.3418456912041 MULTI CID FTMS 0 0 0 8196 376058.34375 0.9908290079801562 -1 0.1033248901367187 3 Unmodified _KEIDMLLKEY_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 84.06023858526366 0.0137402908938907 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DM{I|L}{I|L}KEY 10 0 + 94.418 0.0 0.0 7.3725 7.3725 83.261 0.0 0.0 0.0 6.786662482156345 81.22994718840225 6.786662482156345 2.6979531151190628 0 2.9049471895720984 0.0 0.9247425010840048 1.0994850021680094 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DM{I|L}{I|L}KEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DM{I|L}{I|L}EKY;[K{I|L}]EDM{I|L}{I|L}KEY;[K{I|L}]EDM{I|L}{I|L}EKY;KE{I|L}DM{I|L}{I|L}KEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QS]|[NT]}[SG]{I|L}{I|L}KEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[NG]{[MG]|[TS]}{I|L}KEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QS]|[NT]}[SG]{I|L}{I|L}EKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[NG]{[MG]|[TS]}{I|L}EKY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[QS]|[NT]}[SG]{I|L}KEY 7.3725;7.1619;6.492;6.2813;6.2102;5.3711;5.3711;5.1604;5.1604;4.9985 +;-;-;-;+;-;-;-;-;- + 832 1 1.995 45717.1 1.0 4628 3569 8196 DOHH2_400M_050219_2,8199 DOHH2_400M_050219_2,8199,KEIDMLLKEY True True KEIDMLLKEY 45.959748 641.341845691204 2731536.5 8196.0 nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 6.7419304847717285 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8200 45.963 141.0 301090.0 25 0 21078.0 + 23355 LTDIFQHDTY 10 69 626.7944863111732 1251.5744196891462 2 626.7939330935478 MULTI CID FTMS 0 0 0 8196 225790.5 0.8065864772079163 -1 0.1033248901367187 4 Unmodified _LTDIFQHDTY_ ENSG00000164366|ENST00000296824|CCDC127 49.55428908609986 0.0827668555218455 2 {I|L}TN[PA]D{I|L}D[KC]Y 11 7 + 55.789 0.0 0.0 4.4575 4.4575 77.102 0.0 0.0 0.0 35.708929506758935 1.3200105795410266 1.3200105795410266 6.020599913279625 0 0.3807196863200844 2.0 0.0 0.0 {I|L}TN[PA]D{I|L}D[KC]Y;{I|L}TN[PA]D{I|L}D{[YC]|[HE]}K;{I|L}T[{M(Oxidation (M))|F}V]YTD[KC]Y;{I|L}T[{M(Oxidation (M))|F}V]YTD{[YC]|[HE]}K;[VP]DT{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}{I|L}D[VP];[VP]DT{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}G[NG][VP];[VP]DTD{I|L}D[PA][Y{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}HD{I|L}D[PA]N[VP];[VP]DTDTY[{M(Oxidation (M))|F}V][VP];[VP]DTD{I|L}[WP][Y{M(Oxidation (M))|F}] 4.4575;3.9765;3.3878;2.9068;1.6527;1.626;1.556;1.4612;1.3159;1.0306 -;-;-;-;-;-;-;-;-;- 530 + 1 1.995 38641.1 1.0 4629 3569 8196 DOHH2_400M_050219_2,8200 DOHH2_400M_050219_2,8200,LTDIFQHDTY True True LTDIFQHDTY 45.96259 626.793933093548 1862210.5 8196.0 ENSG00000164366|ENST00000296824|CCDC127 7.0550456047058105 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8201 45.968 285.0 205330.0 25 0 17080.0 + 29246 QGYLRSVF 8 94 485.2614399068875 968.508326880575 2 485.2606078982353 MULTI CID FTMS 0 0 0 8196 166182.953125 0.6394655686829823 -1 0.1033248901367187 5 Unmodified _QGYLRSVF_ ENSG00000089009|ENST00000202773|RPL6;ENST00000431036.1_1_22:45298215-45298323:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF 39.94969957227396 0.2351327405675156 2 QGY{I|L} 4 4 37.529 0.0 0.0 3.8749 0.0 0.0 0.0 504.25922756841874 504.25922756841874 15.539409396148756 0.0 0.0 0.0 0 0.6989700043360187 0.638272163982407 0.0 0.0 + QGY{I|L} 3.8749 + + 89 + 1 1.995 50758.8 1.0 4630 3569 8196 DOHH2_400M_050219_2,8201 DOHH2_400M_050219_2,8201,QGYLRSVF False True QGYLRSVF 45.967828 485.260607898235 1658814.75 8196.0 ENST00000431036.1_1_22:45298215-45298323:+|nuORF;;ENST00000489915.1_1_18:6462145-6462637:-|nuORF;;ENSG00000089009|ENST00000202773|RPL6 5.687559922536214 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8202 45.977 493.0 141740.0 25 0 9564.9 + 16683 KENSLITQF 9 110 540.2909787797312 1078.5674046262625 2 540.2908203005791 MULTI CID FTMS 0 0 0 8196 160610.875 1.0 0 0.0 6 Unmodified _KENSLITQF_ ENSG00000102699|ENST00000381989|PARP4 62.57269311338072 0.0246576765497938 2 [AG]T[QT]{I|L}{I|L}TQ{M(Oxidation (M))|F} 10 5 + 69.491 0.0 0.0 6.4429 6.4429 85.428 0.0 0.0 0.0 6.575773191777927 16.53212513775344 6.575773191777927 6.575773191777927 0 0.2742275032520141 1.5228787452803376 1.7803695511246982 0.6505149978319906 [AG]T[QT]{I|L}{I|L}TQ{M(Oxidation (M))|F};[QT][QT]{I|L}{I|L}TQ{M(Oxidation (M))|F};[AG]T[WR]{I|L}TQ{M(Oxidation (M))|F};[AG]T[QT]{I|L}{I|L}T[AG]{M(Oxidation (M))|F};[QT][WR]{I|L}TQ{M(Oxidation (M))|F};[QT][QT]{I|L}{I|L}T[AG]{M(Oxidation (M))|F};[AG]T[WR]{I|L}T[AG]{M(Oxidation (M))|F};{[ET]|[MV]}EV{I|L}{I|L}TQ{M(Oxidation (M))|F};[VP]D{M(Oxidation (M))|F}{I|L}{I|L}TQ{M(Oxidation (M))|F};{[TV]|[{I|L}S]}N[SG]{I|L}{I|L}TQ{M(Oxidation (M))|F} 6.4429;5.8332;5.8331;5.5932;5.2284;4.9794;4.9794;4.5756;4.4425;4.387 -;-;-;-;-;-;-;-;-;- 723 1 1.995 57563.7 1.0 4631 3569 8196 DOHH2_400M_050219_2,8202 DOHH2_400M_050219_2,8202,KENSLITQF True True KENSLITQF 45.976544 540.290820300579 780553.9375 8196.0 ENSG00000102699|ENST00000381989|PARP4 4.115675965944926 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8203 45.985 491.0 220160.0 25 0 29702.0 + 2872 AVDPRFLAY 9 92 526.2821343029871 1050.549715672774 2 526.2822753787041 MULTI CID FTMS 0 0 0 8196 152962.46875 0.4625561705164512 -2 0.1603660583496093 7 Unmodified _AVDPRFLAY_ ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8 38.17557092003332 0.0854718145212029 2 [RP]{M(Oxidation (M))|F}{I|L}ADVAY 9 6 + 58.695 0.0 0.0 5.587 5.587 89.576 0.0 0.0 0.0 7.376430167995878 14.754406279932653 7.376430167995878 21.36500636031868 0 0.9247425010840048 0.0 0.0 0.2614393726401688 [RP]{M(Oxidation (M))|F}{I|L}ADVAY;[RP]{M(Oxidation (M))|F}{I|L}[DG]{I|L}AY;[RP]{M(Oxidation (M))|F}{I|L}AA[DV]Y;[RP][WK][KC]AY 5.587;3.5533;3.4452;1.1032 -;-;-;- 250 1 1.995 89974.3 1.0 4632 3569 8196 DOHH2_400M_050219_2,8203 DOHH2_400M_050219_2,8203,AVDPRFLAY True True AVDPRFLAY 45.985238 526.282275378704 2299221.5 8196.0 nc|ENSG00000100888|Q9HCK8-2|CHD8;;ENSG00000100888|ENST00000646647|CHD8 3.1866000493367515 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8204 45.999 800.0 73755.0 25 0 8367.1 + 8480 ETDEKDFYLY 10 93 661.7933340562329 1321.5721151792657 2 661.7934448122978 MULTI CID FTMS 0 0 0 8196 149857.109375 0.2116228111789371 4 -0.3524627685546875 8 Unmodified _ETDEKDFYLY_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 19.256988751693697 0.5244284437930726 2 {I|L}Y 2 8 22.959 0.0 0.0 1.7372 0.0 0.0 1027.413711714225 0.0 1027.413711714225 0.0 11.276362525516532 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}Y 1.7372 + + 154 + 1 1.995 50306.2 0.6000000238418579 4633 3569 8196 DOHH2_400M_050219_2,8204 DOHH2_400M_050219_2,8204,ETDEKDFYLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8205 46.011 669.0 152070.0 25 0 32317.0 + 14375 IFCGAFSP 8 98 421.198072106177 840.381591279154 2 421.1974670290947 MULTI CID FTMS 0 0 0 8196 128405.609375 0.7041380871545311 -1 0.1033248901367187 9 Unmodified _IFCGAFSP_ REV__ENST00000216268.5_1_22:50280822-50281059:+|nuORF 14.581692164780916 0.6954967302934248 2 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HDY 6 -1 + 39.997 0.0 0.0 4.7594 4.7594 75.56 0.0 0.0 0.0 11.173808665767943 3.482135413933776 3.482135413933776 3.482135413933776 0 0.2742275032520141 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HDY;{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y[HD];{I|L}{M(Oxidation (M))|F}[QA]{[CP]|[EA]}Y 4.7594;4.345;1.5319 -;-;- 87 + 1 1.995 81650.5 1.0 4634 3569 8196 DOHH2_400M_050219_2,8205 DOHH2_400M_050219_2,8205,IFCGAFSP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8206 46.018 381.0 132370.0 25 0 8691.5 + 31496 RQDGVLQDW 9 83 558.777312152187 1115.540071371174 2 558.7778198122978 MULTI CID FTMS 0 0 0 8196 126626.3828125 1.0 0 0.0 10 Unmodified _RQDGVLQDW_ ENSG00000167005|ENST00000300291|NUDT21 16.149105407346934 0.3995459350917656 2 {[CT]|[{M(Oxidation (M))|F}G]}DQ{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VY 9 7 + 46.589 0.0 0.0 4.1764 4.1764 80.221 0.0 0.0 0.0 15.671649510859352 7.036655871178041 7.036655871178041 9.208187539523747 0 1.424742501084005 0.0 0.0 0.0 {[CT]|[{M(Oxidation (M))|F}G]}DQ{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VY;{[CT]|[{M(Oxidation (M))|F}G]}D[AG]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VY;[YE][W{I|L}]M{I|L}VY;[KP]C(Carbamidomethyl (C))H{[CP]|[EA]}{I|L}VY;[KP]C(Carbamidomethyl (C)){[VA]|[{I|L}G]}{I|L}QDW;[YE]{[ET]|[MV]}{[TV]|[{I|L}S]}{I|L}VY;[KP][CG]H{[CP]|[EA]}{I|L}VY;[KP]C(Carbamidomethyl (C)){[VA]|[{I|L}G]}{I|L}{[YC]|[HE]}Y;[KP][CG]{[VA]|[{I|L}G]}{I|L}QDW;[KP]C(Carbamidomethyl (C)){[VA]|[{I|L}G]}{I|L}[AG]DW 4.1764;3.3509;3.1029;2.8992;2.2257;2.1606;2.0738;1.7375;1.4002;1.4002 -;-;-;-;-;-;-;-;-;- 161 + 1 1.995 47087.2 1.0 4635 3569 8196 DOHH2_400M_050219_2,8206 DOHH2_400M_050219_2,8206,RQDGVLQDW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8207 46.031 800.0 130940.0 25 0 12920.0 + 5521 DMAPKYIL 8 111 475.7542332602931 949.4939135873864 2 475.7544128298759 MULTI CID FTMS 0 0 0 8196 122701.5390625 0.9355312028646948 -1 0.1033248901367187 11 Unmodified _DMAPKYIL_ ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF 34.10243960390752 0.3329570729325616 2 [MD]AP[YK]{I|L}{I|L} 8 0 + 43.867 0.0 0.0 4.62 4.62 85.641 0.0 0.0 0.0 16.34691648101458 5.634862575211059 5.634862575211059 20.561383883823225 0 1.305462187404089 2.0 0.0 0.0 + + [MD]AP[YK]{I|L}{I|L};[Y{I|L}][TP]{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{I|L};[MD][KT]{[ET]|[MV]}{I|L}{I|L};[KP]YA[MD]{I|L}{I|L};[PA]KY[MD]{I|L}{I|L};[YV]GRDD{I|L}{I|L};[MD][KT][{I|L}V]M{I|L};[KP]AY[MD]{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[K{I|L}][MD]{I|L}{I|L} 4.62;2.4545;2.0986;1.6814;1.5805;1.578;1.572;1.3643;0.52612 +;-;-;-;-;-;-;-;- + 155 + 1 1.995 81133.6 0.4900000095367431 4636 3569 8196 DOHH2_400M_050219_2,8207 DOHH2_400M_050219_2,8207,DMAPKYIL False True DMAPKYIL 46.031371 475.754412829876 1120611.75 8196.0 ENST00000586817.5_1_19:1089487-1094188:-|nuORF;;ENSG00000099817|ENST00000615234|POLR2E 3.660856485366821 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8208 46.034 64.0 762280.0 25 0 91438.0 + 41003 VMAPRTVLL 9 65 500.304616573433 998.594680213666 2 500.3045226931572 MULTI CID FTMS 0 0 0 8196 99440.8125 0.0253761461709197 -3 0.1688041687011718 12 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 36.506200033944 0.094635877243972 2 VMA 3 6 55.445 0.0 0.0 5.5523 0.0 0.0 0.0 694.4254674965988 694.4254674965988 19.967940394481687 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMA 5.5523 + + 67 + 1 1.995 43003.3 1.0 4637 3569 8196 DOHH2_400M_050219_2,8208 DOHH2_400M_050219_2,8208,VMAPRTVLL True True VMAPRTVLL 46.034375 500.304522693157 87463032.0 8196.0 ENSG00000234745|ENST00000412585|HLA-B;;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;;ENST00000498007.1_1_6:31324459-31324935:-|nuORF 4.257367293039958 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8210 46.042 217.0 260880.0 25 0 40620.0 + + 24600 MIFKRVVL 8 71 503.3174510849592 1004.6203492367184 2 503.3177368044853 MULTI CID FTMS 0 0 0 8209 198090.375 0.137494454794723 2 -0.2142715454101562 1 Unmodified _MLKRVFVL_ ENST00000438444.5_1_7:43688212-43769049:-|nuORF;ENST00000446564.5_1_7:43688212-43769049:-|nuORF;ENST00000395879.5_2_7:43688212-43688257:-|nuORF;chr7:43648652-43648739|32|20.88|0.73|4.85|-|0|COA1,None|2;ENST00000415076.6_1_7:43688212-43769078:-|nuORF 14.581692164780916 0.6954967302934248 2 M{I|L}{M(Oxidation (M))|F}K[RV]V{I|L} 8 -1 + 57.265 0.0 0.0 5.7001 5.7001 78.687 0.0 0.0 0.0 44.95754791313065 1.079053973095192 1.079053973095192 3.0102999566398125 0 0.4247425010840047 2.0 0.0 0.0 M{I|L}{M(Oxidation (M))|F}K[RV]V{I|L};{I|L}M{M(Oxidation (M))|F}K[RV]V{I|L} 5.7001;5.4005 -;- 38 + 1 1.995 50983.1 1.0 4638 3570 8209 DOHH2_400M_050219_2,8210 DOHH2_400M_050219_2,8210,MLKRVFVL False False MIFKRVVL 46.042352 503.317736804485 16147444.0 8209.0 ENST00000438444.5_1_7:43688212-43769049:-|nuORF;;ENST00000446564.5_1_7:43688212-43769049:-|nuORF;;ENST00000395879.5_2_7:43688212-43688257:-|nuORF;;chr7:43648652-43648739|32|20.88|0.73|4.85|-|0|COA1,None|2;;ENST00000415076.6_1_7:43688212-43769078:-|nuORF 2.48389220237732 2.0 False 8.0 True non_canonical_ambiguous PXD020620_cell_line DOHH2_400M_050219_2 8211 46.048 326.0 143620.0 25 0 11955.0 -1 0 69 766.3695438883676 2296.0868022653026 3 766.7042114138603 MULTI CID FTMS 0 0 0 8209 193223.203125 0.0557497474864232 5 -0.4204025268554687 2 2 TGYGM 5 -1 36.013 0.0 0.0 1.5685 0.0 0.0 1161.493787126851 622.3685486107594 1783.8623357376105 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 TGYGM 1.5685 - 230 + 1 1.995 42074.0 1.0 4639 3570 8209 DOHH2_400M_050219_2,8211 DOHH2_400M_050219_2,8211, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8212 46.055 372.0 262600.0 25 0 47849.0 + 1207 AIDQLHLEY 9 106 551.2825586506784 1100.5505643681568 2 551.2827636599541 MULTI CID FTMS 0 0 0 8209 205462.921875 0.4434211298353663 -1 0.0851287841796875 3 Unmodified _AIDQLHLEY_ ENSG00000130402|ENST00000252699|ACTN4;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4 66.45667989310934 0.0225072657982126 2 [{I|L}A]DGH{I|L}A{I|L}EY 10 3 + 67.63 0.0 0.0 6.1451 6.1451 82.592 0.0 0.0 0.0 3.1555280207258107 18.64995468387385 3.1555280207258107 4.948500216800937 0 1.3807196863200843 2.0 0.0 0.0 [{I|L}A]DGH{I|L}A{I|L}EY;[{I|L}A]DGH{I|L}E[{I|L}A]Y;[H{I|L}]EN{I|L}A{I|L}EY;[{I|L}A]DGH{I|L}EY[{I|L}A];[H{I|L}]QD{I|L}A{I|L}EY;[{I|L}A]DQ{I|L}{[CP]|[EA]}[WR];[H{I|L}]E{I|L}NA{I|L}EY;[H{I|L}]EN{I|L}E[{I|L}A]Y;[H{I|L}]QD{I|L}E[{I|L}A]Y;[{I|L}A]DQ[KP]S{M(Oxidation (M))|F}[VP] 6.1451;5.6954;5.6199;5.5095;5.5064;5.2207;5.1996;5.1703;5.0568;5.04 -;-;-;-;-;-;-;-;-;- 1773 1 1.995 77778.7 1.0 4640 3570 8209 DOHH2_400M_050219_2,8212 DOHH2_400M_050219_2,8212,AIDQLHLEY True True AIDQLHLEY 46.054981 551.282763659954 4994611.5 8209.0 nc|ENSG00000130402|O43707-3|ACTN4;;ENSG00000130402|ENST00000252699|ACTN4;;nc|ENSG00000130402|O43707-2|ACTN4 6.65903107325236 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8213 46.063 464.0 164850.0 25 0 12758.0 + 31358 RNFPDAFEY 9 85 579.7645552907095 1157.514557648219 2 579.7637817263603 MULTI CID FTMS 0 0 0 8209 161436.046875 1.0 0 0.0 4 Unmodified _RNFPDAFEY_ ENSG00000135678|ENST00000551568|CPM;ENST00000546912.1_1_12:69260670-69264157:-|nuORF 31.26834338654808 0.1333407332142048 2 [RN]{M(Oxidation (M))|F}[DP]A{M(Oxidation (M))|F}EY 9 0 + 45.965 0.0 0.0 3.971 3.971 74.018 0.0 0.0 0.0 5.9717340404973385 31.35029351276792 5.9717340404973385 4.771212547196626 0 0.805462187404089 0.0 0.0 0.3807196863200844 + + [RN]{M(Oxidation (M))|F}[DP]A{M(Oxidation (M))|F}EY;[RN]{M(Oxidation (M))|F}G[EP]{M(Oxidation (M))|F}EY;{[CT]|[{M(Oxidation (M))|F}G]}{[NV]|[RG]}[DP]A{M(Oxidation (M))|F}EY;{[CT]|[{M(Oxidation (M))|F}G]}{[NV]|[RG]}G[EP]{M(Oxidation (M))|F}EY;[{M(Oxidation (M))|F}V][PS][QA]A{M(Oxidation (M))|F}EY;{[CT]|[{M(Oxidation (M))|F}G]}{[NV]|[RG]}[WP]{M(Oxidation (M))|F}EY;[TP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[YR]EY;{[CT]|[{M(Oxidation (M))|F}G]}[RN][EP]{M(Oxidation (M))|F}EY;[{M(Oxidation (M))|F}V][PS][RN]{M(Oxidation (M))|F}EY;[{M(Oxidation (M))|F}E][PG][RN]{M(Oxidation (M))|F}EY 3.971;3.5588;3.2439;2.8317;2.8075;2.6795;2.4701;2.2673;2.2431;2.091 +;-;-;-;-;-;-;-;-;- + 283 1 1.995 62794.2 1.0 4641 3570 8209 DOHH2_400M_050219_2,8213 DOHH2_400M_050219_2,8213,RNFPDAFEY False True RNFPDAFEY 46.063219 579.76378172636 5220619.125 8209.0 ENST00000546912.1_1_12:69260670-69264157:-|nuORF;;ENSG00000135678|ENST00000551568|CPM 7.935337384541829 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8214 46.077 800.0 138050.0 25 0 12427.0 + 33157 SEVPGSIPNSW 11 131 586.7833105140554 1171.5520680949107 2 586.7830688357353 MULTI CID FTMS 0 0 0 8209 145718.9375 0.3970714675778322 5 -0.4204025268554687 5 Unmodified _SEVPGSIPNSW_ ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-2|MLH1;nc|ENSG00000076242|P40692-3|MLH1 65.47368725323818 0.0469305343733202 2 {[CT]|[{M(Oxidation (M))|F}G]}SNP{I|L}HGVNM 11 10 + 40.781 0.0 0.0 3.4809 3.4809 71.313 0.0 0.0 0.0 0.095147837223557 4.776527721631929 0.095147837223557 3.5654732351381213 0 1.1409328277719766 0.0 0.6421590589602533 0.75 {[CT]|[{M(Oxidation (M))|F}G]}SNP{I|L}HGVNM;{[CT]|[{M(Oxidation (M))|F}G]}SNP{I|L}HRNM;[YQ]NP{I|L}HGVNM;[NP][YQ]{I|L}HGVNM;[NP]A[YG]{I|L}HGVNM;[YQ]NP{I|L}HRNM;[NP][YQ]{I|L}HRNM;[NP]SW[KG][HT][{M(Oxidation (M))|F}V];[NP]A[YG]{I|L}HRNM;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[QT]{I|L}HGVNM 3.4809;3.1766;2.9681;2.7087;2.6734;2.6675;2.4081;2.3886;2.3691;2.3571 -;-;-;-;-;-;-;-;-;- 1144 1 1.995 86361.7 0.5799999833106995 4642 3570 8209 DOHH2_400M_050219_2,8214 DOHH2_400M_050219_2,8214,SEVPGSIPNSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8215 46.083 327.0 226010.0 25 0 9351.5 + 15730 IRKPYIWEY 9 89 634.3451884952303 1266.6758240572606 2 634.8466064333916 MULTI CID FTMS 0 0 0 8209 135901.203125 0.501715980830023 -1 0.0851287841796875 6 Unmodified _IRKPYIWEY_ ENSG00000136628|ENST00000366923|EPRS1 36.12702656103203 0.0967173616627612 2 [R{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W{I|L}EY 9 2 + 32.563 0.0 0.0 2.5708 2.5708 68.533 0.0 0.0 0.0 2.0908543866868925 21.93340810813814 2.0908543866868925 3.0102999566398125 0 0.6694451763165201 0.0 0.0 0.3807196863200844 [R{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W{I|L}EY;[R{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EWY;[R{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}WEY;[R{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WE{I|L}Y;[KA]VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EGEY;[KA]VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W{I|L}EY;[KA]VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EWY;[KA]VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}WEY;[KA]VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WE{I|L}Y 2.5708;2.3331;2.1941;2.1052;1.6356;1.5029;1.2652;1.1262;1.0373 -;-;+;-;-;-;-;-;- + 267 1 1.995 59116.0 1.0 4643 3570 8209 DOHH2_400M_050219_2,8215 DOHH2_400M_050219_2,8215,IRKPYIWEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8216 46.095 716.0 130010.0 25 0 11014.0 + 6965 EEIFGTIGM 9 118 506.7365962788195 1011.458639624439 2 506.7364379763603 MULTI CID FTMS 0 0 0 8209 131964.109375 1.0 0 0.0 7 Oxidation (M) _EEIFGTIGM(Oxidation (M))_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 53.57557251787612 0.0325303259649373 2 EE{I|L} 3 6 28.205 0.0 0.0 2.7885 0.0 0.0 0.0 637.2658655368015 637.2658655368015 2.007046801327732 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.7302046884880937 0.0 + EE{I|L} 2.7885 + + 445 1 1.995 76119.4 1.0 4644 3570 8209 DOHH2_400M_050219_2,8216 DOHH2_400M_050219_2,8216,EEIFGTIGM True False EEIFGTIGM 46.095431 506.73643797636 1157174.375 8209.0 ENSG00000126457|ENST00000454376|PRMT1;;nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;;nc|ENSG00000126457|Q99873-5|PRMT1 5.280381123224895 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8217 46.103 437.0 85059.0 25 0 7223.0 + 34513 SNKLHFAF 8 85 482.2565764795845 962.498600025969 2 482.2560912966728 MULTI CID FTMS 0 0 0 8209 116100.6171875 1.0 0 0.0 8 Unmodified _SNKLHFAF_ ENSG00000187446|ENST00000334660|CHP1 32.116972079565 0.368454113111938 2 [YT]{M(Oxidation (M))|F} 3 7 28.072 0.0 0.0 2.9166 0.0 0.0 0.0 548.2965181940061 548.2965181940061 10.113168458567683 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YT]{M(Oxidation (M))|F} 2.9166 - 54 + 1 1.995 33989.1 1.0 4645 3570 8209 DOHH2_400M_050219_2,8217 DOHH2_400M_050219_2,8217,SNKLHFAF False True SNKLHFAF 46.103185 482.256091296673 649227.8125 8209.0 ENSG00000187446|ENST00000334660|CHP1 4.866082509358724 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8218 46.115 586.0 197930.0 25 0 10741.0 + 38491 TSETPDYLLKY 11 127 665.3324868387599 1328.6504207443195 2 665.3326293826103 MULTI CID FTMS 0 0 0 8209 114848.3046875 0.5627409019314722 -1 0.0851287841796875 9 Unmodified _TSETPDYLLKY_ ENSG00000105656|ENST00000262809|ELL 93.93812099017352 0.00052454058588 2 TSET[DP]Y{I|L}{I|L}KY 11 0 + 88.869 0.0 0.0 6.6886 6.6886 93.242 0.0 0.0 0.0 38.51397345193905 12.060323256818208 12.060323256818208 19.842961919894776 0 1.5356668758921828 1.6989700043360187 0.4247425010840047 0.2614393726401688 + + TSET[DP]Y{I|L}{I|L}KY;TS[Y{M(Oxidation (M))|F}]K[RK]TSDP;TS[Y{M(Oxidation (M))|F}]KT[RK]SDP;TS[Y{M(Oxidation (M))|F}]TK[RK]SDP;TS[Y{M(Oxidation (M))|F}]K[RK]TDSP;TS[Y{M(Oxidation (M))|F}]KEKKSDP;TS[Y{M(Oxidation (M))|F}]TRKKSDP;TS[Y{M(Oxidation (M))|F}]KT[RK]DSP;TS[Y{M(Oxidation (M))|F}]TK[RK]DSP;TS[Y{M(Oxidation (M))|F}]KEKKDSP 6.6886;5.1952;5.0089;5.0056;4.8198;4.7824;4.779;4.6336;4.6303;4.407 +;-;-;-;-;-;-;-;-;- + 2943 + 1 1.995 86240.1 1.0 4646 3570 8209 DOHH2_400M_050219_2,8218 DOHH2_400M_050219_2,8218,TSETPDYLLKY True True TSETPDYLLKY 46.114627 665.33262938261 1285385.25 8209.0 ENSG00000105656|ENST00000262809|ELL 8.888436158498129 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8219 46.128 800.0 40217.0 25 0 4838.1 -1 0 54 953.4630503337409 2857.367321601422 3 953.7992431521416 MULTI CID FTMS 0 0 0 8209 109743.734375 1.0 0 0.0 10 2 {[QV]|[N{I|L}]|[RA]|[KV]}PN 4 -1 34.425 0.0 0.0 1.2048 0.0 0.0 0.0 2416.1225150430814 2416.1225150430814 23.96713777483761 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}PN 1.2048 - 53 1 1.995 28159.3 0.4399999976158142 4647 3570 8209 DOHH2_400M_050219_2,8219 DOHH2_400M_050219_2,8219, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8220 46.131 133.0 355160.0 25 0 61639.0 10302 FSALTRKKML 10 78 597.856513248852 1193.698473564504 2 597.8561279177666 MULTI CID FTMS 0 0 0 8209 418724.90625 1.0 0 0.0 11 Unmodified _FSALTRKKML_ ENST00000443317.1_1_20:32802260-32803361:-|nuORF 1.6526216038709556 0.7189921496796233 2 Y 1 10 12.218 0.0 0.0 1.0236 0.0 0.0 1012.6237950750492 0.0 1012.6237950750492 0.0 12.21848749616356 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0236 - 5 + 1 1.995 44156.1 1.0 4648 3570 8209 DOHH2_400M_050219_2,8220 DOHH2_400M_050219_2,8220,FSALTRKKML False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8222 46.136 31.0 1265200.0 25 0 249660.0 + 1113 AGPRLQLL 8 57 434.2744419207558 866.5343309083116 2 434.2742187380791 MULTI CID FTMS 0 0 0 8221 1767951.0 0.8940469952797637 1 -0.1174430847167968 1 Unmodified _AGPRLQLL_ REV__ENSG00000167600|ENST00000310054|CYP2S1;REV__nc|ENSG00000167600|Q96SQ9-2|CYP2S1 14.581692164780916 0.6954967302934248 2 {I|L}{I|L} 2 -1 21.454 0.0 0.0 2.4758 0.0 0.0 622.3552670428804 0.0 622.3552670428804 0.0 10.996075289514094 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{I|L} 2.4758 + + 13 + 1 1.995 38256.2 1.0 4649 3571 8221 DOHH2_400M_050219_2,8222 DOHH2_400M_050219_2,8222,AGPRLQLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8223 46.138 65.0 554370.0 25 0 82198.0 + 37349 TKEVNSGFFY 10 62 596.2879796541974 1190.5614063751948 2 596.2880126833916 MULTI CID FTMS 0 0 0 8221 431929.40625 0.3015574242682219 2 -0.1705055236816406 2 Unmodified _TKEVNSGFFY_ nc|ENSG00000132141|Q92526-3|CCT6B 17.11289562659939 0.5604042439455784 2 VY[YR]{M(Oxidation (M))|F}Y 6 7 36.031 0.0 0.0 3.0264 0.0 0.0 281.1243469042948 0.0 281.1243469042948 0.0 25.546218740408904 0.0 0.0 0 1.0 0.0 0.0 0.0 VY[YR]{M(Oxidation (M))|F}Y 3.0264 - 57 + 1 1.995 33107.9 1.0 4650 3571 8221 DOHH2_400M_050219_2,8223 DOHH2_400M_050219_2,8223,TKEVNSGFFY False True False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 8224 46.141 145.0 282720.0 25 0 31183.0 + 15731 IRKPYIWEY 9 74 423.2327572978054 1266.6764424936162 3 423.2326537966728 MULTI CID FTMS 0 0 0 8221 318643.71875 1.0 0 0.0 3 Unmodified _IRKPYIWEY_ ENSG00000136628|ENST00000366923|EPRS1 19.256988751693697 0.3154191944385105 2 [R{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}WY 9 2 + 29.351 0.0 0.0 2.3172 2.3172 63.964 0.0 0.0 0.0 0.6471248870938275 13.153434601012606 0.6471248870938275 0.0443219174010778 0 0.4247425010840047 0.0 0.3054621874040891 0.4247425010840047 [R{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}WY;[R{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EWY;[KA]VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}WY;[KA]VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EWY 2.3172;2.3137;0.90808;0.90458 -;-;-;- 108 1 1.995 41548.3 1.0 4651 3571 8221 DOHH2_400M_050219_2,8224 DOHH2_400M_050219_2,8224,IRKPYIWEY False True IRKPYIWEY 46.140553 423.232653796673 5143364.25 8221.0 ENSG00000136628|ENST00000366923|EPRS1 6.704480171203613 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8225 46.147 336.0 390870.0 25 0 59009.0 + 44081 YIYDEQGKLA 10 77 600.3012506654302 1198.5879483976605 2 600.3018066287041 MULTI CID FTMS 0 0 0 8221 266373.8125 0.4097752110467121 -1 0.0968284606933593 4 Unmodified _YIYDEQGKLA_ REV__ENSG00000213160|ENST00000392647|KLHL23 21.53697664764585 0.484802182336468 2 Y{I|L}YEDEV[R{I|L}] 9 -1 + 85.64 0.0 0.0 7.1451 7.1451 94.597 0.0 0.0 0.0 72.14509699961575 5.999161495794425 5.999161495794425 20.51152522447381 0 0.9247425010840048 2.0 0.3807196863200844 0.2742275032520141 Y{I|L}YEDEV[R{I|L}];Y{I|L}YE{I|L}DD[R{I|L}];Y{I|L}EE{[YD]|[{M(Oxidation (M))|F}M]}V[R{I|L}];Y{I|L}{I|L}[YE]DD[R{I|L}];Y{I|L}{I|L}{[WT]|[RM]}D{[CT]|[{M(Oxidation (M))|F}G]}[KG];Y{I|L}{I|L}C[W{I|L}]{[CT]|[{M(Oxidation (M))|F}G]}[KG];Y{I|L}{M(Oxidation (M))|F}[RP]D{[CT]|[{M(Oxidation (M))|F}G]}[KG] 7.1451;5.4338;3.5326;3.4522;3.2763;3.0252;2.6267 -;-;-;-;-;-;- 189 + 1 1.995 99035.2 1.0 4652 3571 8221 DOHH2_400M_050219_2,8225 DOHH2_400M_050219_2,8225,YIYDEQGKLA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8226 46.154 437.0 82464.0 25 0 7608.1 + -1 DLLRVKCFL 9 76 582.3354365633785 1162.656320193557 2 582.3356201052666 MULTI CID FTMS 0 0 0 8221 243054.71875 0.6474050694655084 2 -0.1705055236816406 5 Carbamidomethyl (C) _DLLRVKC(Carbamidomethyl (C))FL_ REV__ENSG00000167106|ENST00000373095|EEIG1;REV__ENST00000493175.1_1_9:130715879-130742356:-|nuORF;REV__nc|ENSG00000167106|Q5T9C2-2|EEIG1 2.059750862983233 0.8427793054688888 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.995 34825.9 1.0 4653 3571 8221 DOHH2_400M_050219_2,8226 DOHH2_400M_050219_2,8226,DLLRVKCFL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8227 46.161 364.0 148850.0 25 0 17678.0 + 41825 VPYEKGFAL 9 77 512.2793426127738 1022.5441322923476 2 512.2789184451103 MULTI CID FTMS 0 0 0 8221 205158.46875 0.3128220388247739 2 -0.1705055236816406 6 Unmodified _VPYEKGFAL_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 30.63653989081413 0.1413794767160703 2 VPYE 4 5 53.844 0.0 0.0 5.2657 0.0 0.0 0.0 531.2941807725575 531.2941807725575 24.25705341230603 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3494850021680094 0.0 + VPYE 5.2657 + + 159 + 1 1.995 50243.3 1.0 4654 3571 8221 DOHH2_400M_050219_2,8227 DOHH2_400M_050219_2,8227,VPYEKGFAL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8228 46.166 263.0 318690.0 25 0 32333.0 + 7128 EEMPATKGGFSF 12 75 650.7970428741077 1299.5795328150152 2 650.7976562380791 MULTI CID FTMS 0 0 0 8221 191846.03125 0.5479188568508276 -1 0.0968284606933593 7 Unmodified _EEMQSNVEVVH_ nc|ENSG00000124789|P49790-2|NUP153;ENSG00000124789|ENST00000262077|NUP153;nc|ENSG00000124789|P49790-3|NUP153 20.41453444215458 0.6105011870913812 2 [PA]TKGG[KC]APM[HC] 13 12 + 56.373 0.0 0.0 4.3378 4.3378 70.183 0.0 0.0 0.0 2.059066116681876 15.803369036680095 2.059066116681876 0.6214790674884441 0 0.8807196863200843 1.3010299956639813 0.6643943297944485 0.0 [PA]TKGG[KC]APM[HC];[PA]TKG[C(Carbamidomethyl (C))K]APM[HC];[PA]TKN[KC]APM[HC];[KT][PA]GG[KC]APM[HC];[KT][PA]G[C(Carbamidomethyl (C))K]APM[HC];[KT][QP]G[KC]APM[HC];[KT][QP][C(Carbamidomethyl (C))K]APM[HC];[KP][TA]GG[KC]APM[HC];[KP][TA]G[C(Carbamidomethyl (C))K]APM[HC];[KT][PA]N[KC]APM[HC] 4.3378;4.29;3.8267;2.7651;2.7172;2.4856;2.4401;2.3373;2.2895;2.254 -;-;-;-;-;-;-;-;-;- 391 1 1.995 68838.8 1.0 4655 3571 8221 DOHH2_400M_050219_2,8228 DOHH2_400M_050219_2,8228,EEMQSNVEVVH False False EEMPATKGGFSF 46.165893 650.797656238079 2805442.75 8221.0 nc|ENSG00000124789|P49790-2|NUP153;;ENSG00000124789|ENST00000262077|NUP153;;nc|ENSG00000124789|P49790-3|NUP153 7.512832800547282 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8229 46.172 308.0 357970.0 25 0 24710.0 + -1 EVEWQKKLYME 11 108 749.8627855786573 1497.7110182241145 2 750.3638183474541 MULTI CID FTMS 0 0 0 8221 178624.703125 0.2474264961146703 -1 0.0968284606933593 8 Oxidation (M) _EVEWQKKLYM(Oxidation (M))E_ REV__ENST00000263239.6_1_2:118575052-118575118:+|nuORF 15.248480904072842 0.7179608125786238 2 EEVD{I|L}SKD{I|L}QWH 12 -1 + 112.25 0.0 0.0 7.4949 7.4949 63.629 0.0 0.0 0.0 18.78588685498836 0.0 0.0 0.0 0 2.8169015600442577 1.6989700043360187 0.0 0.9291746928241126 EEVD{I|L}SKD{I|L}QWH;EEVD{I|L}SKD{I|L}QHW;EEVD{I|L}SKD{I|L}[AG]HW;EEVD{I|L}SKD{I|L}[AG]WH;EEVD{I|L}SV[SG]{I|L}QHW;EEVD{I|L}SV[SG]{I|L}QWH;EEV[KP]DKS{I|L}DV[HC];[DV]P{[SA]|[TG]}{I|L}DKS{I|L}DV[HC];EEVD[KP]KS{I|L}DV[HC];{[QG]|[NA]}[TA]D{I|L}SKD{I|L}QWH 7.4949;7.4949;6.7044;6.7044;6.5983;6.5983;5.9937;5.7266;5.5888;5.5521 -;-;-;-;-;-;-;-;-;- 5538 + 1 1.995 81103.9 1.0 4656 3571 8221 DOHH2_400M_050219_2,8229 DOHH2_400M_050219_2,8229,EVEWQKKLYME False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8230 46.175 177.0 290170.0 25 0 19064.0 + 12499 GVDLTGPQLY 10 89 531.7786731139917 1061.5427932947832 2 531.7773925662041 MULTI CID FTMS 0 0 0 8221 165653.53125 1.0 0 0.0 9 Unmodified _GVDLTGPQLY_ chr16:67935478-67935630|18|95.22|0.0|23.18|-|2|PSMB10,None|1;ENSG00000205220|ENST00000358514|PSMB10 37.97399986684836 0.1789611706409123 2 [VG]D[KP]DR{I|L}Y 9 5 + 35.128 0.0 0.0 3.3091 3.3091 69.545 0.0 0.0 0.0 2.79840696594043 7.944539621753542 2.79840696594043 2.79840696594043 0 0.6989700043360187 1.6989700043360187 0.4247425010840047 0.0 [VG]D[KP]DR{I|L}Y;[QP]{I|L}GTDR{I|L}Y;[QP]G{I|L}TDR{I|L}Y;[VG]DTA[PA]R{I|L}Y;[QP]GT{I|L}DR{I|L}Y;[QP]G{I|L}ESR{I|L}Y;[QP]{I|L}GESR{I|L}Y;[VG]D[KP]D[VG]{I|L}Y;[QP]G{I|L}TD[VG]{I|L}Y;[QP]{I|L}GTD[VG]{I|L}Y 3.3091;3.0455;3.0455;2.8166;2.5961;2.533;2.533;2.4417;2.1781;2.1781 -;-;-;-;-;-;-;-;-;- 495 1 1.995 45743.3 1.0 4657 3571 8221 DOHH2_400M_050219_2,8230 DOHH2_400M_050219_2,8230,GVDLTGPQLY False True GVDLTGPQLY 46.175014 531.777392566204 1580401.875 8221.0 chr16:67935478-67935630|18|95.22|0.0|23.18|-|2|PSMB10,None|1;;ENSG00000205220|ENST00000358514|PSMB10 1.7070996115605035 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8231 46.189 800.0 154130.0 25 0 5234.4 -1 0 111 938.4350185328278 1874.855484132456 2 938.9357787966728 MULTI CID FTMS 0 0 0 8221 123225.578125 0.4137890959445354 -1 0.0968284606933593 10 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQNA{M(Oxidation (M))|F}YEV[EP] 17 -1 + 104.95 0.0 0.0 5.5976 5.5976 76.859 0.0 0.0 0.0 6.777807052660805 0.0 0.0 1.955198108940067 0 0.3807196863200844 1.154901959985743 0.8494850021680094 1.610924374808178 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQNA{M(Oxidation (M))|F}YEV[EP];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YEV{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QAQNA{M(Oxidation (M))|F}YEV[EP];[YQ]V[CS]AGAQNA{M(Oxidation (M))|F}YEV{I|L}{I|L};[YQ]V[CS]AQQNA{M(Oxidation (M))|F}YEV{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQGGA{M(Oxidation (M))|F}YEV[EP];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGA[AG]NA{M(Oxidation (M))|F}YEV[EP];[AG]YV[CS]AGAQNA{M(Oxidation (M))|F}YEV{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]NA{M(Oxidation (M))|F}YEV[EP];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQGGA{M(Oxidation (M))|F}YEV[EP] 5.5976;5.4933;5.2388;5.236;5.1318;5.1176;5.1176;5.0402;5.0125;5.0125 -;-;-;-;-;-;-;-;-;- 17573 1 1.995 85218.0 0.5 4658 3571 8221 DOHH2_400M_050219_2,8231 DOHH2_400M_050219_2,8231, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8232 46.201 690.0 153090.0 25 0 11471.0 + 8730 EVLQRIESL 9 140 543.8101903759791 1085.605827818758 2 543.8112670779228 MULTI CID FTMS 0 0 0 8221 122943.7265625 0.3205848960172726 2 -0.1705055236816406 11 Unmodified _EVLQRIESL_ ENSG00000182185|ENST00000471583|RAD51B;ENST00000474051.1_1_14:68352547-68354002:+|nuORF;ENST00000553595.5_1_14:68331761-69149671:+|nuORF;nc|ENSG00000182185|O15315-1|RAD51B;nc|ENSG00000182185|O15315-4|RAD51B;nc|ENSG00000182185|O15315-5|RAD51B;nc|ENSG00000182185|O15315|RAD51B 49.55428908609986 0.0413471690215031 2 {I|L}D{I|L}S 4 6 50.156 0.0 0.0 4.6201 0.0 0.0 0.0 654.3718355768186 654.3718355768186 23.78734122535916 0.0 0.0 0.0 0 0.6747425010840047 1.6989700043360187 0.2887254899964357 0.0 {I|L}D{I|L}S 4.6201 - 410 + 1 1.995 84105.9 1.0 4659 3571 8221 DOHH2_400M_050219_2,8232 DOHH2_400M_050219_2,8232,EVLQRIESL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8233 46.209 383.0 264140.0 25 0 20157.0 + -1 GENVIISHF 9 120 508.30176323036505 1014.58897352753 2 508.3021118044853 MULTI CID FTMS 0 0 0 8221 119762.8984375 0.4521409553351251 -1 0.0968284606933593 12 Oxidation (M) _VM(Oxidation (M))APRTVLL_ ENST00000525250.5_1_11:821680-823850:+|nuORF;ENSG00000177666|ENST00000336615|PNPLA2 33.4449034751529 0.1114409586740657 2 V{I|L}{I|L}SH{M(Oxidation (M))|F} 6 -1 41.146 0.0 0.0 4.0555 0.0 0.0 300.18125828728586 0.0 300.18125828728586 0.0 2.870156338638594 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}{I|L}SH{M(Oxidation (M))|F} 4.0555 - 351 + 1 1.995 78629.2 1.0 4660 3571 8221 DOHH2_400M_050219_2,8233 DOHH2_400M_050219_2,8233,VMAPRTVLL False False GENVIISHF 46.208899 508.302111804485 2940128.0 8221.0 ENST00000525250.5_1_11:821680-823850:+|nuORF;;ENSG00000177666|ENST00000336615|PNPLA2 6.671498457590739 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8234 46.223 800.0 75167.0 25 0 9562.0 + 42882 VVNKNGRL 8 94 450.2747646595719 898.5349763859438 2 450.2747375369072 MULTI CID FTMS 0 0 0 8221 106009.125 0.0834130672633072 7 -0.419464111328125 13 Unmodified _VVNKNGRL_ REV__CON__Q28085 0.6903765706972694 0.8201419426409876 2 {I|L} 1 -1 10.713 0.0 0.0 1.1923 0.0 0.0 767.4395764609422 0.0 767.4395764609422 0.0 7.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1923 + + 5 + 1 1.995 54628.9 0.4099999964237213 4661 3571 8221 DOHH2_400M_050219_2,8234 DOHH2_400M_050219_2,8234,VVNKNGRL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8235 46.235 720.0 157690.0 25 0 11021.0 + 41022 VMEKSFLEY 9 145 573.2830257601353 1144.5514985870705 2 573.2807494997978 MULTI CID FTMS 0 0 0 8221 92442.9296875 0.8587869751324938 -1 0.0968284606933593 14 Unmodified _VMEKSFLEY_ ENSG00000159202|ENST00000360943|UBE2Z;ENST00000513342.5_1_17:46990150-47004493:+|nuORF;nc|ENSG00000159202|Q9H832-2|UBE2Z 47.594388314883695 0.0456443387682827 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EKETEY 9 5 + 43.258 0.0 0.0 3.7795 3.7795 68.546 0.0 0.0 0.0 4.270885837162126 10.602482293585858 4.270885837162126 0.7390874094431936 0 0.25 0.8239087409443188 0.6989700043360187 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EKETEY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EKEMVY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}KEETEY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}KEEMVY;{[ET]|[MV]}QAM{M(Oxidation (M))|F}KKY;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EKEMVY;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}KEEMVY;[YE][{I|L}A]KEMVY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EKMVEY;[{I|L}A]YEKEMVY 3.7795;3.7149;3.6703;3.6058;3.3423;3.035;2.9259;2.9104;2.7943;2.772 -;-;-;-;-;-;-;-;-;- 3600 1 1.995 88882.5 1.0 4662 3571 8221 DOHH2_400M_050219_2,8235 DOHH2_400M_050219_2,8235,VMEKSFLEY True True VMEKSFLEY 46.23522 573.280749499798 1045768.5 8221.0 ENST00000513342.5_1_17:46990150-47004493:+|nuORF;;nc|ENSG00000159202|Q9H832-2|UBE2Z;;ENSG00000159202|ENST00000360943|UBE2Z 3.9819765090942383 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8236 46.249 705.0 95981.0 25 0 6089.4 + 1158 AGYMATSLLLM 11 111 585.7996565220028 1169.5847601108055 2 585.7996093630791 MULTI CID FTMS 0 0 0 8221 105323.2578125 1.0 0 0.0 15 Unmodified _AGYMATSLLLM_ REV__ENSG00000176087|ENST00000323146|SLC35A4 13.90604991867851 0.7458848613461305 2 [NP]SW[QP]VV{I|L}M 10 -1 + 28.814 0.0 0.0 2.4636 2.4636 71.908 0.0 0.0 0.0 0.1672069722747728 12.359944576838805 0.1672069722747728 6.154239528859439 0 0.5994850021680094 0.744727494896694 0.0 0.0 [NP]SW[QP]VV{I|L}M;[NP]A{[DS]|[MA]|[CV]|TT}[QP]VV{I|L}M;[NP]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HN]V{I|L}M;[NP]S{[DA]|[EG]}[QP]VV{I|L}M;{[ES]|[DT]|[{I|L}C]}V{[QN]|[E{I|L}]|[KN]}[HN]V{I|L}M;[PG]GSW[QP]VV{I|L}M;{[ES]|[DT]|[{I|L}C]}V[R{I|L}][WH]{I|L}M;[YV]VV[QP][MT]S{M(Oxidation (M))|F};[PG]Q{[DS]|[MA]|[CV]|TT}[QP]VV{I|L}M;[PG]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HN]V{I|L}M 2.4636;1.9374;1.7831;1.68;1.3541;1.1387;1.1207;0.96912;0.77285;0.61855 -;-;-;-;-;-;-;-;-;- 564 1 1.995 57208.1 1.0 4663 3571 8221 DOHH2_400M_050219_2,8236 DOHH2_400M_050219_2,8236,AGYMATSLLLM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8238 46.254 62.0 621880.0 25 0 135270.0 + -1 WQLTMKKKV 9 61 589.3434271203944 1176.672301307589 2 589.3431884646416 MULTI CID FTMS 0 0 0 8237 838418.5 0.6682397265091601 2 -0.1307144165039062 1 Oxidation (M) _WQLTM(Oxidation (M))KKKV_ REV__ENST00000466094.5_1_7:107220736-107227893:+|nuORF;REV__ENST00000486326.5_1_7:107220736-107234551:+|nuORF 0.6014990680409731 0.8936861360942873 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 36764.6 1.0 4664 3572 8237 DOHH2_400M_050219_2,8238 DOHH2_400M_050219_2,8238,WQLTMKKKV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8239 46.259 239.0 177130.0 25 0 9379.5 + 25429 NEEGFVRLY 9 79 563.7810745394186 1125.547596145637 2 563.7803222537041 MULTI CID FTMS 0 0 0 8237 140194.78125 0.2879569635173753 2 -0.1307144165039062 2 Unmodified _NEEGFVRLY_ ENSG00000143476|ENST00000366991|DTL;nc|ENSG00000143476|Q9NZJ0-2|DTL 21.59015148037692 0.2564810811560323 2 {[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}GVR{I|L}Y 9 2 + 44.065 0.0 0.0 3.915 3.915 71.808 0.0 0.0 0.0 7.147642715192504 5.88271706842329 5.88271706842329 3.0102999566398125 0 0.3252574989159953 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}GVR{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}EG{M(Oxidation (M))|F}VR{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}GVRY{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}RR{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}EG{M(Oxidation (M))|F}VRY{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}W{M(Oxidation (M))|F}VR{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}RRY{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}{I|L}RRY;{[QD]|[EN]|[WG]|[KD]|[RS]}W{M(Oxidation (M))|F}VRY{I|L};[MD]K{[DS]|[MA]|[CV]|TT}VR{I|L}Y 3.915;3.6475;3.3923;3.3394;3.1249;3.0719;2.8167;2.6323;2.5493;2.5107 -;+;-;-;-;-;-;-;-;- + 167 + 1 1.995 39454.4 1.0 4665 3572 8237 DOHH2_400M_050219_2,8239 DOHH2_400M_050219_2,8239,NEEGFVRLY False True NEEGFVRLY 46.258538 563.780322253704 3581163.5 8237.0 nc|ENSG00000143476|Q9NZJ0-2|DTL;;ENSG00000143476|ENST00000366991|DTL 6.213826974232991 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8240 46.262 164.0 482930.0 25 0 73255.0 + 19934 LIDADPYLKY 10 76 605.821862451105 1209.6291719690098 2 605.8214599490166 MULTI CID FTMS 0 0 0 8237 397360.6875 0.6777320337778121 -1 0.1174430847167968 3 Unmodified _LIDADPYLKY_ ENSG00000145386|ENST00000274026|CCNA2 38.61474834105838 0.1721950110283317 2 {I|L}{I|L}DAD{M(Oxidation (M))|F}{I|L}{I|L}KY 10 2 + 88.397 0.0 0.0 7.3078 7.3078 97.081 0.0 0.0 0.0 55.209347275122624 12.01667520279372 12.01667520279372 88.39693490136675 0 1.6237125054200234 2.0 0.0 0.3054621874040891 {I|L}{I|L}DAD{M(Oxidation (M))|F}{I|L}{I|L}KY 7.3078 - 256 + 1 1.995 62227.2 1.0 4666 3572 8237 DOHH2_400M_050219_2,8240 DOHH2_400M_050219_2,8240,LIDADPYLKY False True LIDADPYLKY 46.261774 605.821459949017 3421898.5 8237.0 ENSG00000145386|ENST00000274026|CCNA2 6.696657657623291 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8241 46.274 706.0 132560.0 25 0 11356.0 2873 AVDPRFLAY 9 116 526.2821343029871 1050.549715672774 2 526.2811767458916 MULTI CID FTMS 0 0 0 8237 93666.8828125 0.2832472237930143 1 -0.0530624389648437 4 Unmodified _AVDPRFLAY_ ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8 29.081581746732265 0.1611639662936252 2 {[VA]|[{I|L}G]}[C(Carbamidomethyl (C))Q]{I|L}VKAY 9 5 + 59.135 0.0 0.0 5.6289 5.6289 88.377 0.0 0.0 0.0 14.58983321807466 13.750612633917 13.750612633917 13.750612633917 0 1.2302046884880935 2.0 0.0 0.0 {[VA]|[{I|L}G]}[C(Carbamidomethyl (C))Q]{I|L}VKAY;{[VA]|[{I|L}G]}[C(Carbamidomethyl (C))Q]{I|L}VKS{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[C(Carbamidomethyl (C))Q]{I|L}VSK{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}{I|L}VKS{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}{I|L}VSK{M(Oxidation (M))|F};[KS]V[RN]DVAY;[{I|L}T]{I|L}W{[RE]|[WV]}AY;[{I|L}T][HK][YG]VAY;[{I|L}T]HK{I|L}[YN]Y;[{I|L}T]{I|L}VWWAY 5.6289;4.32;4.1063;3.3846;3.1708;2.795;2.2002;2.0592;1.9859;1.7947 -;-;-;-;-;-;-;-;-;- 507 + 1 1.995 77117.5 1.0 4667 3572 8237 DOHH2_400M_050219_2,8241 DOHH2_400M_050219_2,8241,AVDPRFLAY False True NETLIVSKF 46.274041 526.281176745892 629226.3125 8237.0 ENSG00000116455|ENST00000235090|WDR77 3.658497015635173 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8242 46.288 800.0 147440.0 25 0 13946.0 + 28664 AEDPNLNQPVW 11 144 641.8826054993914 1281.750658065583 2 641.8826782107353 MULTI CID FTMS 0 0 0 8237 91910.8125 0.6281170845238971 -3 0.2994003295898437 5 Unmodified _PVNELKVKMKP_ ENSG00000135837|ENST00000367607|CEP350 8.745405648335112 0.8338865417133445 2 [VP]QN[NS]NQ 8 9 29.589 0.0 0.0 2.3084 0.0 0.0 0.0 397.3395207763448 397.3395207763448 13.882805414149786 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 1.0994850021680094 [VP]QN[NS]NQ 2.3084 - 833 1 1.995 92618.9 0.4600000083446502 4668 3572 8237 DOHH2_400M_050219_2,8242 DOHH2_400M_050219_2,8242,PVNELKVKMKP False False AEDPNLNQPVW 46.287878 641.882678210735 938850.0625 8237.0 ENSG00000135837|ENST00000367607|CEP350 6.442562103271484 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8243 46.302 800.0 126430.0 25 0 28649.0 + 30560 RENWISLRY 9 87 618.8272430746188 1235.6399332160374 2 618.8271362185478 MULTI CID FTMS 0 0 0 8237 88569.875 1.0 0 0.0 6 Unmodified _RENWISLRY_ ENSG00000121210|ENST00000409959|TMEM131L;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L 9.5439744041441 0.5815088571869578 2 RE 2 7 17.505 0.0 0.0 1.4167 0.0 0.0 0.0 947.4733980768186 947.4733980768186 3.6928031367991534 0.0 0.0 0.0 0 0.1307196863200844 0.0 0.0 0.0 + RE 1.4167 + + 47 + 1 1.995 79974.1 0.4600000083446502 4669 3572 8237 DOHH2_400M_050219_2,8243 DOHH2_400M_050219_2,8243,RENWISLRY False True RENWISLRY 46.301713 618.827136218548 728839.5 8237.0 nc|ENSG00000121210|A2VDJ0|TMEM131L;;nc|ENSG00000121210|A2VDJ0-2|TMEM131L;;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;;ENSG00000121210|ENST00000409959|TMEM131L;;nc|ENSG00000121210|A2VDJ0-6|TMEM131L 4.078381299972534 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8245 46.306 15.0 3165100.0 25 0 312080.0 + 41004 VMAPRTVLL 9 73 500.304616573433 998.594680213666 2 500.3047057986259 MULTI CID FTMS 0 0 0 8244 3004588.25 0.7667361991378331 1 -0.0776519775390625 1 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 36.506200033944 0.094635877243972 2 VMA 3 6 54.693 0.0 0.0 5.477 0.0 0.0 0.0 694.42619556196 694.42619556196 26.741115296921265 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + VMA 5.477 + + 81 + 1 1.995 43751.9 1.0 4670 3573 8244 DOHH2_400M_050219_2,8245 DOHH2_400M_050219_2,8245,VMAPRTVLL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8246 46.316 518.0 132880.0 25 0 21833.0 + 1208 AIDQLHLEY 9 96 551.2825586506784 1100.5505643681568 2 551.2825805544853 MULTI CID FTMS 0 0 0 8244 104236.0 0.2249575955979003 2 -0.1530685424804687 2 Unmodified _AIDQLHLEY_ ENSG00000130402|ENST00000252699|ACTN4;nc|ENSG00000130402|O43707-2|ACTN4;nc|ENSG00000130402|O43707-3|ACTN4 36.12702656103203 0.0967173616627612 2 [H{I|L}]EN{I|L}E[{I|L}A]Y 9 5 + 48.61 0.0 0.0 4.4169 4.4169 79.239 0.0 0.0 0.0 0.2377310771389318 12.24809656601387 0.2377310771389318 8.519374645445623 0 0.3807196863200844 1.0457574905606752 0.0 0.3252574989159953 [H{I|L}]EN{I|L}E[{I|L}A]Y;{[QN]|[E{I|L}]|[KN]}HN{I|L}E[{I|L}A]Y;[H{I|L}]E{I|L}NE[{I|L}A]Y;[H{I|L}]{I|L}ENE[{I|L}A]Y;[H{I|L}]EGG{I|L}E[{I|L}A]Y;[H{I|L}]{I|L}QDE[{I|L}A]Y;{[QN]|[E{I|L}]|[KN]}HGG{I|L}E[{I|L}A]Y;{[QN]|[E{I|L}]|[KN]}H{I|L}NE[{I|L}A]Y;[H{I|L}]E{I|L}GGE[{I|L}A]Y;[H{I|L}]{I|L}EGGE[{I|L}A]Y 4.4169;3.6428;3.4143;3.3007;3.2846;3.1872;2.8061;2.6402;2.5776;2.4641 -;-;-;-;-;-;-;-;-;- 585 1 1.995 58830.8 1.0 4671 3573 8244 DOHH2_400M_050219_2,8246 DOHH2_400M_050219_2,8246,AIDQLHLEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8247 46.318 107.0 611930.0 25 0 54641.0 9448 FLAYLLIGWGL 11 84 633.3690621411636 1264.723571349127 2 633.3692504763603 MULTI CID FTMS 0 0 0 8244 393721.1875 0.9335812790510444 -2 0.1705055236816406 3 Unmodified _FLAYLLIGWGL_ ENSG00000106018|ENST00000262178|VIPR2;nc|ENSG00000106018|P41587-2|VIPR2 6.723162845929126 0.8434276150410019 2 {M(Oxidation (M))|F}{I|L}DSQ[RV]W 8 8 21.297 0.0 0.0 1.6839 0.0 0.0 215.19715256121412 0.0 215.19715256121412 0.0 10.83912540424891 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {M(Oxidation (M))|F}{I|L}DSQ[RV]W 1.6839 - 208 + 1 1.995 53008.3 1.0 4672 3573 8244 DOHH2_400M_050219_2,8247 DOHH2_400M_050219_2,8247,FLAYLLIGWGL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8248 46.321 180.0 735000.0 25 0 129660.0 + 31641 RRFTEIYEF 9 75 630.822405188728 1259.630257444256 2 630.8222534060478 MULTI CID FTMS 0 0 0 8244 297715.8125 0.0652686813456034 -3 0.267333984375 4 Unmodified _RRFTEIYEF_ chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1;nc|ENSG00000165178|A8MVU1|NCF1C;nc|ENSG00000290838|A6NI72|NCF1B 34.40172386719151 0.1061884637610825 2 E[{I|L}P][KS]{I|L}YE{M(Oxidation (M))|F} 9 5 35.402 0.0 0.0 2.8105 0.0 0.0 135.06868178535314 0.0 135.06868178535314 0.0 17.44273099358574 0.0 0.0 0 0.7302046884880937 0.0 0.0 1.6549471895720984 E[{I|L}P][KS]{I|L}YE{M(Oxidation (M))|F} 2.8105 - 124 1 1.995 100884.8 1.0 4673 3573 8244 DOHH2_400M_050219_2,8248 DOHH2_400M_050219_2,8248,RRFTEIYEF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8249 46.325 161.0 272210.0 25 0 16656.0 + 43358 WPLIKHVEV 9 95 560.8278761839339 1119.6411994346677 2 560.8270751833916 MULTI CID FTMS 0 0 0 8244 292537.40625 0.8462208370241532 -1 0.0530624389648437 5 Unmodified _WPLIKHVEV_ ENSG00000189233|ENST00000413272|NUGGC 32.78568957990786 0.1150597335874693 2 WP{I|L}{I|L}K[HV]EV 9 0 + 44.259 0.0 0.0 3.9529 3.9529 51.503 0.0 0.0 0.0 21.42667503568732 0.0 0.0 0.0 0 0.6989700043360187 1.2218487496163564 0.5 0.0 + + WP{I|L}{I|L}K[HV]EV;WP{I|L}{I|L}K[HV]D{I|L};WP{I|L}{I|L}[{I|L}T]{I|L}[HQ];WP{I|L}{I|L}[{I|L}T][HQ]{I|L};[{I|L}P]{I|L}{[WT]|[RM]}{I|L}{I|L}[HQ];[{I|L}P][TP][HA]{I|L}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}P]W[{I|L}T]{I|L}{I|L}[HQ];[HV][{M(Oxidation (M))|F}V]K{I|L}{I|L}[HQ];[{I|L}P]{[{M(Oxidation (M))|F}H]|[RQ]}[KT]{I|L}[HQ] 3.9529;3.9529;2.5947;2.1808;1.4419;1.2437;1.2163;0.94503;0.39147 +;-;-;-;-;-;-;-;- + 170 + 1 1.995 38795.1 1.0 4674 3573 8244 DOHH2_400M_050219_2,8249 DOHH2_400M_050219_2,8249,WPLIKHVEV True True WPLIKHVEV 46.324598 560.827075183392 3031223.75 8244.0 ENSG00000189233|ENST00000413272|NUGGC 6.56434949239095 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8250 46.327 140.0 327290.0 25 0 16261.0 + 11211 GENVIISHF 9 73 508.2640585859168 1014.5135642386336 2 508.2642089724541 MULTI CID FTMS 0 0 0 8244 257053.421875 1.0 0 0.0 6 Unmodified _GENVIISHF_ ENSG00000177666|ENST00000336615|PNPLA2;ENST00000525250.5_1_11:821680-823850:+|nuORF 29.081581746732265 0.1611639662936252 2 {[DA]|[EG]}NV{I|L}{I|L}SH{M(Oxidation (M))|F} 9 0 {[DA]|[EG]}NV + + 38.756 25.662 6.4287 3.8201 3.8201 51.147 0.0 0.0 0.0 0.0 13.093859345357188 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + + {[DA]|[EG]}NV{I|L}{I|L}SH{M(Oxidation (M))|F} 3.8201 + + 82 + 1 1.995 40377.5 1.0 4675 3573 8244 DOHH2_400M_050219_2,8250 DOHH2_400M_050219_2,8250,GENVIISHF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8251 46.331 168.0 250460.0 25 0 26286.0 + 25844 NLDPLTETY 9 83 533.2590531359463 1064.5035533386924 2 533.2594482302666 MULTI CID FTMS 0 0 0 8244 188326.609375 0.2279687853692076 -2 0.1705055236816406 7 Unmodified _NLDPLTETY_ ENSG00000173418|ENST00000334982|NAA20;nc|ENSG00000173418|P61599-2|NAA20 47.74868867922204 0.0453060283459952 2 {[QV]|[N{I|L}]|[RA]|[KV]}DP[{I|L}T]ETY 9 0 + 44.003 0.0 0.0 4.1337 4.1337 74.322 0.0 0.0 0.0 4.514099636583062 11.0827208845118 4.514099636583062 4.514099636583062 0 0.8935078169319297 1.5228787452803376 0.4247425010840047 0.5010912013506126 + + {[QV]|[N{I|L}]|[RA]|[KV]}DP[{I|L}T]ETY;[{I|L}P]TD{[QV]|[N{I|L}]|[RA]|[KV]}ETY;[{I|L}P]TEG[VG]ETY;[{I|L}P]TW[VG]ETY;[{I|L}P]DT{[QV]|[N{I|L}]|[RA]|[KV]}ETY;[{I|L}P]DN[{I|L}T]ETY;{[QV]|[N{I|L}]|[RA]|[KV]}[NG]V[VG]ETY;[{I|L}P]DGG[{I|L}T]ETY;[DP]{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]}ETY;[DP]{I|L}N[{I|L}T]ETY 4.1337;3.7096;3.2884;3.0482;3.0278;2.7665;2.3946;1.9015;1.837;1.5757 +;-;-;-;-;-;-;-;-;- + 268 1 1.995 38404.2 1.0 4676 3573 8244 DOHH2_400M_050219_2,8251 DOHH2_400M_050219_2,8251,NLDPLTETY True True NLDPLTETY 46.330713 533.259448230267 5071175.5 8244.0 nc|ENSG00000173418|P61599-2|NAA20;;ENSG00000173418|ENST00000334982|NAA20 5.443483352661133 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8252 46.338 399.0 127390.0 25 0 18070.0 9229 FGQRLLGMLP 10 82 566.3218158295025 1130.629078725805 2 566.3220092654228 MULTI CID FTMS 0 0 0 8244 144900.09375 0.4219719586491773 4 -0.2324409484863281 8 Unmodified _FGQRLLGMLP_ ENSG00000183323|ENST00000396496|CCDC125;nc|ENSG00000183323|Q86Z20-2|CCDC125 4.3292370932331545 0.7066112369704343 2 W 1 10 12.764 0.0 0.0 1.1289 0.0 0.0 926.5393703291236 0.0 926.5393703291236 0.0 2.764209843288903 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1289 - 23 + 1 1.995 43718.1 1.0 4677 3573 8244 DOHH2_400M_050219_2,8252 DOHH2_400M_050219_2,8252,FGQRLLGMLP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8253 46.352 800.0 272750.0 25 0 30761.0 + 31644 RRFTEIYEF 9 99 420.88410160001655 1259.6304754002497 3 420.8838989138603 MULTI CID FTMS 0 0 0 8244 97838.015625 0.0653557338854125 -3 0.267333984375 9 Unmodified _RRFTEIYEF_ chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1;nc|ENSG00000165178|A8MVU1|NCF1C;nc|ENSG00000290838|A6NI72|NCF1B 29.081581746732265 0.1611639662936252 2 {[ET]|[MV]}RR{M(Oxidation (M))|F}{I|L}YE{M(Oxidation (M))|F} 9 4 + 49.319 0.0 0.0 3.9154 3.9154 81.502 0.0 0.0 0.0 5.253312076568903 33.12137499549429 5.253312076568903 12.730012720637376 0 0.4247425010840047 0.0 0.3807196863200844 1.1421590589602533 {[ET]|[MV]}RR{M(Oxidation (M))|F}{I|L}YE{M(Oxidation (M))|F};[HD][PA][R{I|L}]{I|L}YE{M(Oxidation (M))|F};{[ET]|[MV]}RR{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RH] 3.9154;2.9048;0.27143 -;-;- 195 1 1.995 175261.5 0.800000011920929 4678 3573 8244 DOHH2_400M_050219_2,8253 DOHH2_400M_050219_2,8253,RRFTEIYEF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8254 46.366 800.0 217100.0 25 0 38615.0 + 39796 VERRDQIYY 9 132 621.3145152557028 1240.6144775782054 2 621.3177368044853 MULTI CID FTMS 0 0 0 8244 102216.21875 0.3666776900639207 -2 0.1705055236816406 10 Unmodified _VERRDQIYY_ REV__ENSG00000168781|ENST00000420765|PPIP5K1;REV__ENST00000488768.5_1_15:43865553-43876720:-|nuORF;REV__nc|ENSG00000168781|Q6PFW1-2|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1-3|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1-4|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1-5|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1-6|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1-7|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1|PPIP5K1 32.30548876998284 0.1201446275138228 2 DT{I|L}{M(Oxidation (M))|F}{I|L}YY 7 -1 68.422 0.0 0.0 5.5152 0.0 0.0 307.16454673407856 0.0 307.16454673407856 0.0 31.009562869230862 0.0 0.0 0 0.9247425010840048 0.0 2.0994850021680094 0.0 DT{I|L}{M(Oxidation (M))|F}{I|L}YY 5.5152 - 5037 1 1.995 132042.1 0.4699999988079071 4679 3573 8244 DOHH2_400M_050219_2,8254 DOHH2_400M_050219_2,8254,VERRDQIYY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8255 46.379 800.0 400550.0 25 0 103080.0 + 37842 TLTSKLYSL 9 149 513.297596696144 1024.5806404590878 2 513.2990600466728 MULTI CID FTMS 0 0 0 8244 86324.03125 0.037237360696684 -4 0.3524627685546875 11 Unmodified _TLTSKLYSL_ ENSG00000184076|ENST00000330029|UQCR10;nc|ENSG00000184076|Q9UDW1-2|UQCR10 125.52916310638032 0.0024920486013546 2 [{I|L}T][KS]YS{I|L}T{I|L} 9 4 + 78.193 0.0 0.0 7.6317 7.6317 80.481 0.0 0.0 0.0 10.034666326551658 0.312346841520764 0.312346841520764 0.312346841520764 0 0.8807196863200843 2.0 2.051203852579394 0.0 [{I|L}T][KS]YS{I|L}T{I|L};[{I|L}T][KS]YS{I|L}{I|L}T;[Y{I|L}]KSTS{I|L}T{I|L};[Y{I|L}]SKTS{I|L}T{I|L};[Y{I|L}]SKTS{I|L}{I|L}T;[Y{I|L}]KSTS{I|L}{I|L}T;[{I|L}T][KS]YVTT{I|L};[{I|L}T][KS]YVT{I|L}T;[KS]T{I|L}YS{I|L}T{I|L};{[TV]|[{I|L}S]}KTYS{I|L}T{I|L} 7.6317;7.6012;6.6523;6.6523;6.6218;6.6218;6.6084;6.5779;6.5719;6.5594 -;-;-;-;-;-;-;-;-;- 9339 1 1.995 242869.4 0.959999978542328 4680 3573 8244 DOHH2_400M_050219_2,8255 DOHH2_400M_050219_2,8255,TLTSKLYSL True True TLTSKLYSL 46.379359 513.299060046673 39774507.0 8244.0 ENSG00000184076|ENST00000330029|UQCR10;;nc|ENSG00000184076|Q9UDW1-2|UQCR10 4.452188809712728 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8257 46.394 592.0 164460.0 25 0 12133.0 + 31359 RNFPDAFEY 9 104 579.7645552907095 1157.514557648219 2 579.7642089724541 MULTI CID FTMS 0 0 0 8256 126850.8203125 0.7857651544869694 4 -0.1713066101074218 1 Unmodified _RNFPDAFEY_ ENSG00000135678|ENST00000551568|CPM;ENST00000546912.1_1_12:69260670-69264157:-|nuORF 16.149105407346934 0.3995459350917656 2 {[ET]|[MV]}N{[RE]|[WV]}A{M(Oxidation (M))|F}EY 9 5 + 40.398 0.0 0.0 3.49 3.49 74.592 0.0 0.0 0.0 1.3693178344330192 26.418271902055324 1.3693178344330192 6.523722004121446 0 0.5 0.0 0.1747425010840047 0.3807196863200844 {[ET]|[MV]}N{[RE]|[WV]}A{M(Oxidation (M))|F}EY;{[CT]|[{M(Oxidation (M))|F}G]}VYYA{M(Oxidation (M))|F}EY;{[ET]|[MV]}GG{[RE]|[WV]}A{M(Oxidation (M))|F}EY;[KA]{[MS]|[{M(Oxidation (M))|F}A]}[DP]A{M(Oxidation (M))|F}EY;{[DS]|[MA]|[CV]|TT}[KS][DP]A{M(Oxidation (M))|F}EY;[KA]{[MS]|[{M(Oxidation (M))|F}A]}[WP]{M(Oxidation (M))|F}EY;{[DS]|[MA]|[CV]|TT}[KS][WP]{M(Oxidation (M))|F}EY 3.49;2.9264;2.6945;2.3614;2.1998;1.4682;1.3065 -;-;-;-;-;-;- 176 1 1.995 75128.5 1.0 4681 3574 8256 DOHH2_400M_050219_2,8257 DOHH2_400M_050219_2,8257,RNFPDAFEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8258 46.395 43.0 1698400.0 25 0 178160.0 + 32810 SEFIDSQRVW 10 72 633.809392975791 1265.6042330183818 2 633.8093749880791 MULTI CID FTMS 0 0 0 8256 1068359.75 0.6388843560948696 -1 0.0776519775390625 2 Unmodified _SEFIDSQRVW_ ENSG00000174231|ENST00000304992|PRPF8;ENST00000572445.1_1_17:1564459-1565038:-|nuORF 40.72490554402381 0.149912226101682 2 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}DSQRVW 10 0 + 60.406 0.0 0.0 4.7729 4.7729 81.619 0.0 0.0 0.0 38.72363747448347 10.128333601982009 10.128333601982009 9.164539485499256 0 1.8182503180159344 0.0 0.3807196863200844 0.0 + + {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}DSQRVW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}DS[AG]RVW;{[CT]|[{M(Oxidation (M))|F}G]}VRQSD{I|L}M[DV];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}D[W{I|L}]D{[QN]|[E{I|L}]|[KN]};{[CT]|[{M(Oxidation (M))|F}G]}VR[AG]SD{I|L}M[DV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[W{I|L}]D{I|L}M[DV];{[ES]|[DT]|[{I|L}C]}[RN][R{M(Oxidation (M))|F}]{I|L}M[DV];[R{M(Oxidation (M))|F}][C(Carbamidomethyl (C))Q]SQ[RV]W 4.7729;4.0488;3.2767;3.058;2.5554;2.2859;2.0521;1.6112 +;-;-;-;-;-;-;- + 117 + 1 1.995 59946.3 1.0 4682 3574 8256 DOHH2_400M_050219_2,8258 DOHH2_400M_050219_2,8258,SEFIDSQRVW False True SEFIDSQRVW 46.394831 633.809374988079 40766292.0 8256.0 ENST00000572445.1_1_17:1564459-1565038:-|nuORF;;ENSG00000174231|ENST00000304992|PRPF8 7.875840663909912 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8259 46.397 116.0 438300.0 25 0 22985.0 + + -1 NLDIIQQEY 9 93 568.2565594741293 1134.4985660150585 2 568.2565795779228 MULTI CID FTMS 0 0 0 8256 214941.671875 0.9640330024223698 -1 0.0776519775390625 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RTEGGSVQEM_ ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 8.155526934196011 0.6889124077178598 2 {I|L}NGKEY 6 -1 37.587 0.0 0.0 3.3131 0.0 0.0 412.1420729504085 0.0 412.1420729504085 0.0 6.78456906244314 0.0 0.0 0 0.5 0.0 0.5 0.3252574989159953 {I|L}NGKEY 3.3131 - 212 + 1 1.995 45364.3 1.0 4683 3574 8256 DOHH2_400M_050219_2,8259 DOHH2_400M_050219_2,8259,RTEGGSVQEM False False NLDIIQQEY 46.397264 568.256579577923 1432584.875 8256.0 ENSG00000115368|ENST00000314761|WDR75;;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 1.2372575998306274 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8260 46.4 132.0 345900.0 25 0 50171.0 + 27977 PLWLPRLEP 9 71 374.22179802527216 1119.6435646760165 3 374.2220641970634 MULTI CID FTMS 0 0 0 8256 217657.1875 0.9061222376400384 -1 0.0776519775390625 4 Unmodified _PLWLPRLEP_ REV__ENST00000464025.5_1_11:33886210-33886258:-|nuORF 6.723162845929126 0.6799819581413107 2 V 1 -1 11.594 0.0 0.0 1.0355 0.0 0.0 1002.5640186328508 0.0 1002.5640186328508 0.0 6.109243748081781 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0355 - 11 + 1 1.995 46922.7 1.0 4684 3574 8256 DOHH2_400M_050219_2,8260 DOHH2_400M_050219_2,8260,PLWLPRLEP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8261 46.409 527.0 185140.0 25 0 16250.0 -1 0 95 764.3622865400097 2290.065030220229 3 764.6973144412041 MULTI CID FTMS 0 0 0 8256 167664.875 0.7557142935618004 -1 0.0776519775390625 5 2 [MN]PN{I|L}NW{[{M(Oxidation (M))|F}H]|[RQ]}D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}QS{I|L}KDD 19 -1 + 82.813 0.0 0.0 3.6162 3.6162 74.175 0.0 0.0 0.0 54.46301109215359 2.7560406136976496 2.7560406136976496 6.020599913279625 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.8494850021680094 [MN]PN{I|L}NW{[{M(Oxidation (M))|F}H]|[RQ]}D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}QS{I|L}KDD;[MN]PN{I|L}NHE[YR]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}QS{I|L}KDD 3.6162;3.3533 -;- 792 + 1 1.995 75570.3 1.0 4685 3574 8256 DOHH2_400M_050219_2,8261 DOHH2_400M_050219_2,8261, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8262 46.419 529.0 269260.0 25 0 50474.0 + 35253 SSEQTFMYY 9 139 578.2368447216012 1154.4591365100025 2 578.2362548708916 MULTI CID FTMS 0 0 0 8256 141402.53125 0.0868135648371449 -5 0.43011474609375 6 Unmodified _SSEQTFMYY_ ENSG00000115758|ENST00000234111|ODC1 32.037481411007896 0.1235546156350648 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HT{M(Oxidation (M))|F}MYY 8 4 + 57.261 0.0 0.0 4.96 4.96 80.642 0.0 0.0 0.0 7.157067017436717 33.478451952859665 7.157067017436717 7.257724967479859 0 0.8182503180159344 2.0 1.3494850021680094 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HT{M(Oxidation (M))|F}MYY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}H{M(Oxidation (M))|F}TMYY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SST{M(Oxidation (M))|F}MYY;[QT]DST{M(Oxidation (M))|F}MYY;[AG]ESST{M(Oxidation (M))|F}MYY;{[ES]|[DT]|[{I|L}C]}QST{M(Oxidation (M))|F}MYY;[AG]TDST{M(Oxidation (M))|F}MYY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SS{M(Oxidation (M))|F}TMYY;{[ET]|[MV]}NST{M(Oxidation (M))|F}MYY;[QT]DS{M(Oxidation (M))|F}TMYY 4.96;4.3313;4.0774;3.8299;3.6766;3.5178;3.4513;3.4487;3.3601;3.2012 -;-;-;-;-;-;-;-;-;- 2275 1 1.995 107720.6 1.0 4686 3574 8256 DOHH2_400M_050219_2,8262 DOHH2_400M_050219_2,8262,SSEQTFMYY True True SSEQTFMYY 46.418546 578.236254870892 10215928.0 8256.0 ENSG00000115758|ENST00000234111|ODC1 5.230886777242024 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8263 46.425 376.0 323490.0 25 0 48269.0 + 29055 QEIPVNVRF 9 109 551.3062874212299 1100.5980219092596 2 551.3060790896416 MULTI CID FTMS 0 0 0 8256 121775.0546875 0.2149211127137407 -3 0.2481575012207031 7 Unmodified _QEIPVNVRF_ ENSG00000133313|ENST00000324262|CNDP2 72.96794272382148 0.0199516581995792 2 QE{I|L}PVNVR{M(Oxidation (M))|F} 9 0 + 77.233 0.0 0.0 7.0174 7.0174 90.566 0.0 0.0 0.0 57.321844178516486 7.169577525961273 7.169577525961273 9.208187539523747 0 1.4604093769761874 1.5228787452803376 0.0 0.4247425010840047 + + QE{I|L}PVNVR{M(Oxidation (M))|F};QE{I|L}PVGGVR{M(Oxidation (M))|F} 7.0174;6.1807 +;- + 300 + 1 1.995 95723.6 1.0 4687 3574 8256 DOHH2_400M_050219_2,8263 DOHH2_400M_050219_2,8263,QEIPVNVRF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8264 46.435 558.0 92924.0 25 0 7226.3 + 7750 ELEKSVYWDY 10 73 666.3119455050552 1330.6093380769105 2 666.3114501833916 MULTI CID FTMS 0 0 0 8256 106172.984375 1.0 0 0.0 8 Unmodified _ELEKSVYWDY_ ENSG00000141258|ENST00000268989|SGSM2;nc|ENSG00000141258|O43147-5|SGSM2;nc|ENSG00000141258|O43147|SGSM2 53.832793166522166 0.0576554960245129 2 YVSK[TA]Y 7 8 33.989 0.0 0.0 2.5544 0.0 0.0 500.1929181138119 0.0 500.1929181138119 0.0 24.697369754785257 0.0 0.0 0 0.5 0.0 0.805462187404089 0.0 YVSK[TA]Y 2.5544 - 304 + 1 1.995 47615.8 1.0 4688 3574 8256 DOHH2_400M_050219_2,8264 DOHH2_400M_050219_2,8264,ELEKSVYWDY True True ELEKSVYWDY 46.435116 666.311450183392 686347.1875 8256.0 ENSG00000141258|ENST00000268989|SGSM2;;nc|ENSG00000141258|O43147|SGSM2;;nc|ENSG00000141258|O43147-5|SGSM2 6.154911677042644 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8265 46.449 800.0 119650.0 25 0 9612.8 -1 0 89 769.0333257059796 2304.0781477181386 3 769.3697997927666 MULTI CID FTMS 0 0 0 8256 91592.4765625 1.0 0 0.0 9 2 [MN]PN{I|L}[HD]Q{I|L} 9 -1 57.725 0.0 0.0 2.5054 0.0 0.0 0.0 1238.5441378229127 1238.5441378229127 38.48589548359068 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.0 0.4247425010840047 [MN]PN{I|L}[HD]Q{I|L} 2.5054 - 607 + 1 1.995 75516.6 0.4600000083446502 4689 3574 8256 DOHH2_400M_050219_2,8265 DOHH2_400M_050219_2,8265, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8266 46.455 249.0 658240.0 25 0 63283.0 6179 DTDISLIRY 9 108 548.2873821760077 1094.5602114188152 2 548.2841674685478 MULTI CID FTMS 0 0 0 8256 128934.8671875 0.1413571768634346 5 -0.21893310546875 10 Unmodified _DTDISLIRY_ ENSG00000101158|ENST00000652272|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;nc|ENSG00000101158|Q8IXH7|NELFCD 30.63653989081413 0.1413794767160703 2 EY{I|L}[KS][RH]Y 8 5 + 43.466 0.0 0.0 3.9711 3.9711 83.374 0.0 0.0 0.0 22.31939364284848 5.506981269092606 5.506981269092606 21.480625354554373 0 0.0 1.0 0.0 1.1861818737241734 EY{I|L}[KS][RH]Y;EY{I|L}[KS][{I|L}P][{M(Oxidation (M))|F}V];EY{I|L}[QT][VP][{M(Oxidation (M))|F}V];{[ES]|[DT]|[{I|L}C]}[{I|L}P]V{M(Oxidation (M))|F}{I|L}YQ;{[QN]|[E{I|L}]|[KN]}[PS]V{M(Oxidation (M))|F}{I|L}YQ;[Q{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}YQ;{[TV]|[{I|L}S]}[EP]V{M(Oxidation (M))|F}{I|L}YQ;{[TV]|[{I|L}S]}HH[KS]{I|L}HH;{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QT]{I|L}HH 3.9711;2.0086;1.8477;1.8185;1.3576;0.94107;0.86055;0.36423;0.20335 -;-;-;-;-;-;-;-;- 358 + 1 1.995 127906.3 1.0 4690 3574 8256 DOHH2_400M_050219_2,8266 DOHH2_400M_050219_2,8266,DTDISLIRY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8268 46.462 241.0 183800.0 25 0 13114.0 + 6840 EEVDLSKDIQHW 12 71 749.8627855786573 1497.7110182241145 2 749.8622314333916 MULTI CID FTMS 0 0 0 8267 141986.375 0.1588842180310468 3 -0.0958900451660156 1 Unmodified _EEDFRRWASFR_ ENSG00000171848|ENST00000304567|RRM2;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 7.608950283845883 0.8392484121837455 2 EEVD{I|L}SKD{I|L}QHW 12 9 + 104.07 0.0 0.0 6.9487 6.9487 88.938 0.0 0.0 0.0 18.785886854988377 9.522976709946306 9.522976709946306 9.098233696509112 0 2.6549471895720984 1.6989700043360187 0.0 0.0 EEVD{I|L}SKD{I|L}QHW;EEVD{I|L}SKD{I|L}[AG]HW;EEVD{I|L}SKD{I|L}QWH;EEVD{I|L}SKD{I|L}[AG]WH;{[CT]|[{M(Oxidation (M))|F}G]}HQ{I|L}DKS{I|L}MHW;EEVD[KP]KS{I|L}MH{[DA]|[EG]};{[CT]|[{M(Oxidation (M))|F}G]}HM{I|L}SKD{I|L}QWH;{[CT]|[{M(Oxidation (M))|F}G]}H[AG]{I|L}DKS{I|L}MHW;{[CT]|[{M(Oxidation (M))|F}G]}HM[KP]KS{I|L}DV[HC];EEV[WE]K[KP]MHW 6.9487;6.3412;6.3128;5.7054;5.4038;5.1429;4.8182;4.7963;4.3245;4.3197 -;-;-;-;-;-;-;-;-;- 914 + 1 1.995 35691.9 1.0 4691 3575 8267 DOHH2_400M_050219_2,8268 DOHH2_400M_050219_2,8268,EEDFRRWASFR False False EEVDLSKDIQHW 46.461858 749.862231433392 10801804.0 8267.0 ENSG00000171848|ENST00000304567|RRM2;;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;;nc|ENSG00000171848|P31350-2|RRM2 11.711417516072592 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8269 46.47 451.0 140130.0 25 0 18308.0 + 44082 YIYDEQGKLA 10 60 600.3012506654302 1198.5879483976605 2 600.3010742068291 MULTI CID FTMS 0 0 0 8267 117166.921875 0.1802433192978448 3 -0.0958900451660156 2 Unmodified _YIYDEQGKLA_ REV__ENSG00000213160|ENST00000392647|KLHL23 21.53697664764585 0.484802182336468 2 Y{I|L}YEDEV[R{I|L}] 9 -1 + 81.916 0.0 0.0 6.8344 6.8344 95.813 0.0 0.0 0.0 64.46858230198188 2.922152515121212 2.922152515121212 81.91585725094882 0 0.4247425010840047 2.0 0.8494850021680094 0.0 Y{I|L}YEDEV[R{I|L}] 6.8344 - 65 + 1 1.995 51662.9 1.0 4692 3575 8267 DOHH2_400M_050219_2,8269 DOHH2_400M_050219_2,8269,YIYDEQGKLA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8270 46.473 130.0 371440.0 25 0 23075.0 + 25830 NLDIIQQEY 9 83 568.2854306222281 1134.556308311256 2 568.2853881716728 MULTI CID FTMS 0 0 0 8267 239036.59375 1.0 0 0.0 3 Unmodified _NLDIIQQEY_ ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 14.838274106304384 0.4350285940865338 2 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L} 4 5 28.716 0.0 0.0 2.5311 0.0 0.0 0.0 676.2960293408061 676.2960293408061 11.726759565325295 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.3054621874040891 + {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L} 2.5311 + + 155 1 1.995 40437.8 1.0 4693 3575 8267 DOHH2_400M_050219_2,8270 DOHH2_400M_050219_2,8270,NLDIIQQEY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8271 46.477 267.0 192760.0 25 0 24162.0 + 13747 KEPEQPPALW 10 76 597.856513248852 1193.698473564504 2 597.8561889529228 MULTI CID FTMS 0 0 0 8267 191309.71875 0.4568864089392819 5 -0.1976547241210937 4 Unmodified _HRLRWKLW_ ENSG00000153395|ENST00000283415|LPCAT1 2.889219685676258 0.8067950007271085 2 {I|L}W 2 6 14.693 0.0 0.0 1.2309 0.0 0.0 876.5249638982915 0.0 876.5249638982915 0.0 9.208187539523747 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}W 1.2309 + + 31 + 1 1.995 42040.7 1.0 4694 3575 8267 DOHH2_400M_050219_2,8271 DOHH2_400M_050219_2,8271,HRLRWKLW False False KEPEQPPALW 46.477485 597.856188952923 786709.3125 8267.0 ENSG00000153395|ENST00000283415|LPCAT1 5.302475770314534 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8272 46.487 548.0 183400.0 25 0 19109.0 20970 LNLLLERDT 9 105 543.8101903759791 1085.605827818758 2 544.3097411990166 MULTI CID FTMS 0 0 0 8267 164088.84375 0.6270477135360732 6 -0.21856689453125 5 Unmodified _LNLLLERDT_ ENSG00000158402|ENST00000323760|CDC25C;nc|ENSG00000158402|P30307-2|CDC25C;nc|ENSG00000158402|P30307-3|CDC25C;nc|ENSG00000158402|P30307-4|CDC25C 7.289230182591677 0.6602208344931196 2 {[QV]|[N{I|L}]|[RA]|[KV]}V 3 7 17.14 0.0 0.0 1.5788 0.0 0.0 0.0 756.3876936236987 756.3876936236987 4.37580271024207 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.1989700043360188 {[QV]|[N{I|L}]|[RA]|[KV]}V 1.5788 - 98 1 1.995 79587.3 1.0 4695 3575 8267 DOHH2_400M_050219_2,8272 DOHH2_400M_050219_2,8272,LNLLLERDT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8273 46.493 305.0 208090.0 25 0 30532.0 + 36487 TADHNLLLY 9 85 530.2770945757053 1058.5396362182105 2 530.2768432497978 MULTI CID FTMS 0 0 0 8267 122017.5625 0.5762117391408612 -1 0.0754165649414062 6 Unmodified _TADHNLLLY_ ENSG00000183751|ENST00000568546|TBL3 49.93300154707207 0.0405168250806675 2 {I|L}{I|L}{I|L}N{[QD]|[EN]|[WG]|[KD]|[RS]}Y 7 7 57.836 0.0 0.0 5.4637 0.0 0.0 181.07889510668548 0.0 181.07889510668548 0.0 47.91402596017612 0.0 0.0 0 0.5 0.0 1.2302046884880935 0.7302046884880937 {I|L}{I|L}{I|L}N{[QD]|[EN]|[WG]|[KD]|[RS]}Y 5.4637 - 165 + 1 1.995 50984.6 1.0 4696 3575 8267 DOHH2_400M_050219_2,8273 DOHH2_400M_050219_2,8273,TADHNLLLY True True TADHNLLLY 46.492697 530.276843249798 1202632.0 8267.0 ENSG00000183751|ENST00000568546|TBL3 5.244281689325969 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8274 46.506 757.0 117960.0 25 0 13657.0 + 1114 AGPRLQLL 8 133 434.2744419207558 866.5343309083116 2 434.2744933962822 MULTI CID FTMS 0 0 0 8267 114328.984375 0.0578157906830312 5 -0.1976547241210937 7 Unmodified _AGPRLQLL_ REV__ENSG00000167600|ENST00000310054|CYP2S1;REV__nc|ENSG00000167600|Q96SQ9-2|CYP2S1 19.438996006549623 0.6237395211498085 2 Q{I|L}{I|L} 3 -1 30.802 0.0 0.0 3.5546 0.0 0.0 494.2972584455094 0.0 494.2972584455094 0.0 22.35863111416478 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 Q{I|L}{I|L} 3.5546 + + 32 1 1.995 73967.8 1.0 4697 3575 8267 DOHH2_400M_050219_2,8274 DOHH2_400M_050219_2,8274,AGPRLQLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8276 46.524 800.0 143840.0 25 0 13866.0 + 20925 NLDIPEGPAVQY 12 122 658.3302582660423 1314.6459635988845 2 658.3300659060478 MULTI CID FTMS 0 0 0 8275 125514.328125 1.0 0 0.0 1 Unmodified _LNDWQRHAIY_ ENSG00000183111|ENST00000333677|ARHGEF37 20.453626601364224 0.5043500229302764 2 {[QV]|[N{I|L}]|[RA]|[KV]}[HS]VQNNVQY 11 7 + 64.58 0.0 0.0 4.9124 4.9124 85.806 0.0 0.0 0.0 22.83719873060721 10.10986068477434 10.10986068477434 14.64130707932496 0 1.2034021960761268 1.6989700043360187 0.8065533887547017 0.6989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}[HS]VQNNVQY;{[QV]|[N{I|L}]|[RA]|[KV]}[WH]QNNVQY;{[QV]|[N{I|L}]|[RA]|[KV]}D[HQ][W{I|L}]VQY;{[QV]|[N{I|L}]|[RA]|[KV]}P[EP]Q[DV]{I|L}QY;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}[WP][PA]VQY;[PA]DAPVQ[DV]{I|L}QY;{[QV]|[N{I|L}]|[RA]|[KV]}[YC(Carbamidomethyl (C))]KNNVQY;{[QV]|[N{I|L}]|[RA]|[KV]}[WH]Q[DV]{I|L}QY;{[QV]|[N{I|L}]|[RA]|[KV]}PA[WP]NNVQY;{[QV]|[N{I|L}]|[RA]|[KV]}D[YK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}QY 4.9124;3.7987;3.2034;3.1964;3.1752;3.047;3.0065;2.9579;2.8954;2.8337 -;-;-;-;-;-;-;-;-;- 1918 1 1.995 88749.3 0.4900000095367431 4698 3576 8275 DOHH2_400M_050219_2,8276 DOHH2_400M_050219_2,8276,LNDWQRHAIY False False NLDIPEGPAVQY 46.523505 658.330065906048 992063.25 8275.0 ENSG00000183111|ENST00000333677|ARHGEF37 7.7050849596659345 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8277 46.529 291.0 233800.0 25 0 56334.0 + 20512 LLLMLPPF 8 62 472.2884274497442 942.5623019662884 2 472.2877685427666 MULTI CID FTMS 0 0 0 8275 279801.59375 0.2591312749894595 -5 0.3745956420898437 2 Unmodified _LLLMLPPF_ REV__ENSG00000205329|ENST00000641740|OR6C3 0.7936320650641473 0.8195151834710337 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 60456.8 1.0 4699 3576 8275 DOHH2_400M_050219_2,8277 DOHH2_400M_050219_2,8277,LLLMLPPF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8278 46.534 290.0 232630.0 25 0 32771.0 + 181 AANPHSFVF 9 104 495.2458316263696 988.4771103195392 2 495.2454711794853 MULTI CID FTMS 0 0 0 8275 188735.953125 0.0944891825614306 -7 0.5565528869628906 3 Unmodified _AANPHSFVF_ ENSG00000130810|ENST00000253107|PPAN;nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN 65.23502041540118 0.0231836506122253 2 TS{M(Oxidation (M))|F}V{M(Oxidation (M))|F} 5 5 42.907 0.0 0.0 4.3407 0.0 0.0 389.1905689923844 0.0 389.1905689923844 0.0 11.462505624616384 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.0 TS{M(Oxidation (M))|F}V{M(Oxidation (M))|F} 4.3407 - 1367 1 1.995 55029.6 1.0 4700 3576 8275 DOHH2_400M_050219_2,8278 DOHH2_400M_050219_2,8278,AANPHSFVF True True AANPHSFVF 46.534153 495.245471179485 35736105.0 8275.0 nc|ENSG00000130810|Q9NQ55-2|PPAN;;nc|ENSG00000130810|Q9NQ55-3|PPAN;;ENSG00000130810|ENST00000253107|PPAN 8.610657374064127 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8280 46.54 175.0 304510.0 25 0 61956.0 39603 VDKFVKELLS 10 74 589.3434271203944 1176.672301307589 2 589.3430053591728 MULTI CID FTMS 0 0 0 8279 346734.375 0.27635564329905 7 -0.2177352905273437 1 Unmodified _VDKFVKELLS_ ENSG00000068383|ENST00000368594|INPP5A 2.735195868890462 0.713984610296514 2 Y 1 10 13.495 0.0 0.0 1.1469 0.0 0.0 995.5979127351262 0.0 995.5979127351262 0.0 4.225490200071285 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1469 - 10 + 1 1.995 46106.0 1.0 4701 3577 8279 DOHH2_400M_050219_2,8280 DOHH2_400M_050219_2,8280,VDKFVKELLS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8281 46.546 321.0 192220.0 25 0 30247.0 + 42924 VVRHLTVL 8 56 468.8033716916249 935.5921904500498 2 468.8031494021416 MULTI CID FTMS 0 0 0 8279 163457.0625 0.9698328165682504 -1 0.028350830078125 2 Unmodified _VVRHLTVL_ REV__ENSG00000158246|ENST00000289166|TENT5B 18.13498045792455 0.6430038125133779 2 VWH{I|L}VV{I|L} 7 -1 46.931 0.0 0.0 5.0161 0.0 0.0 71.07428939033359 0.0 71.07428939033359 0.0 30.2751076100089 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 VWH{I|L}VV{I|L} 5.0161 - 35 1 1.995 52748.3 1.0 4702 3577 8279 DOHH2_400M_050219_2,8281 DOHH2_400M_050219_2,8281,VVRHLTVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8282 46.551 254.0 189960.0 25 0 36799.0 25985 NLRVFAKI 8 82 480.801610520472 959.588668107744 2 480.8008300662041 MULTI CID FTMS 0 0 0 8279 216286.953125 0.4618167489265095 -4 0.2324409484863281 3 Unmodified _NLRVFAKI_ ENSG00000154263|ENST00000690296|ABCA10;nc|ENSG00000154263|Q8WWZ4-2|ABCA10 2.577480529830294 0.808687252328423 2 {I|L} 1 7 9.9148 0.0 0.0 1.0332 0.0 0.0 828.4938327579379 0.0 828.4938327579379 0.0 8.321039490384035 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0332 + + 17 + 1 1.995 41550.5 1.0 4703 3577 8279 DOHH2_400M_050219_2,8282 DOHH2_400M_050219_2,8282,NLRVFAKI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8284 46.567 800.0 123830.0 25 0 16482.0 + 40665 VLEPRIRTIW 10 120 641.8826054993914 1281.750658065583 2 641.8823730349541 MULTI CID FTMS 0 0 0 8283 98802.609375 0.6752155187832602 3 -0.1226768493652343 1 Unmodified _VLEPRIRTIW_ REV__ENSG00000131042|ENST00000314446|LILRB2;REV__nc|ENSG00000131042|Q8N423-1|LILRB2;REV__nc|ENSG00000131042|Q8N423-3|LILRB2 3.944395688203298 0.708391353636983 2 W 1 -1 12.474 0.0 0.0 0.97322 0.0 0.0 1077.6602477646045 0.0 1077.6602477646045 0.0 3.6518923429382113 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.97322 + + 119 + 1 1.995 80912.2 0.5 4704 3578 8283 DOHH2_400M_050219_2,8284 DOHH2_400M_050219_2,8284,VLEPRIRTIW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8285 46.571 185.0 607030.0 25 0 48338.0 + 38588 TTDLELIKY 9 98 548.301441100727 1094.5883292682538 2 548.3018066287041 MULTI CID FTMS 0 0 0 8283 111675.8984375 0.2433680757943534 -3 0.0958900451660156 2 Unmodified _TTDLELIKY_ ENSG00000164109|ENST00000296509|MAD2L1;ENST00000511295.1_1_4:120986776-120987958:-|nuORF;nc|ENSG00000164109|Q13257-2|MAD2L1 49.52724829834842 0.0414064571532091 2 {[QN]|[E{I|L}]|[KN]}{I|L}[WM]{I|L}YK 8 7 + 40.142 0.0 0.0 3.6673 3.6673 68.802 0.0 0.0 0.0 7.367034247796759 7.367034247796759 7.367034247796759 1.3033376849500584 0 0.8807196863200843 1.0457574905606752 0.3252574989159953 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}[WM]{I|L}YK;{[QN]|[E{I|L}]|[KN]}{I|L}S{[ET]|[MV]}{I|L}YK;{[DS]|[MA]|[CV]|TT}D{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}KY;{[DS]|[MA]|[CV]|TT}[WR]Q{I|L}YK;{[DS]|[MA]|[CV]|TT}{[QN]|[E{I|L}]|[KN]}D{I|L}{I|L}KY;{[DS]|[MA]|[CV]|TT}[WR][AG]{I|L}YK;{[QN]|[E{I|L}]|[KN]}D[KS]{[NV]|[RG]}YK;[Q{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}YK;{[DS]|[MA]|[CV]|TT}D[RV]{[NV]|[RG]}YK;[K{I|L}][NS]{[ET]|[MV]}{I|L}YK 3.6673;3.5482;2.9943;2.8137;2.675;1.9675;1.9429;1.8647;1.6138;1.2434 -;-;+;-;-;-;-;-;-;- + 394 1 1.995 90353.8 1.0 4705 3578 8283 DOHH2_400M_050219_2,8285 DOHH2_400M_050219_2,8285,TTDLELIKY True False TTDLELIKY 46.570624 548.301806628704 2086016.5 8283.0 nc|ENSG00000164109|Q13257-2|MAD2L1;;ENST00000511295.1_1_4:120986776-120987958:-|nuORF;;ENSG00000164109|ENST00000296509|MAD2L1 3.8192137082417807 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8286 46.584 800.0 77272.0 25 0 11063.0 -1 SSEQTFMYY 9 114 586.2339873641156 1170.453421795031 2 586.2338134646416 MULTI CID FTMS 0 0 0 8283 83634.1953125 1.0 0 0.0 3 Oxidation (M) _SSEQTFM(Oxidation (M))YY_ ENSG00000115758|ENST00000234111|ODC1 26.88365393820708 0.1891292719743517 2 {M(Oxidation (M))|F}YY 3 -1 23.962 0.0 0.0 2.0472 0.0 0.0 679.2807971385843 0.0 679.2807971385843 0.0 10.863153634730873 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}YY 2.0472 + + 518 + 1 1.995 51229.1 0.4000000059604645 4706 3578 8283 DOHH2_400M_050219_2,8286 DOHH2_400M_050219_2,8286,SSEQTFMYY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8287 46.598 800.0 75166.0 25 0 4804.7 -1 EYMKSPLVY 9 91 573.2830257601353 1144.5514985870705 2 573.2839233279228 MULTI CID FTMS 0 0 0 8283 94981.671875 0.882371674700266 6 -0.2012176513671875 4 Oxidation (M) _EYM(Oxidation (M))KSPLVY_ ENSG00000103269|ENST00000352681|RHBDL1;ENST00000450775.2_1_16:725790-727700:+|nuORF;nc|ENSG00000103269|O75783|RHBDL1 13.042465956692816 0.4836390050082244 2 V{I|L}PY{I|L}VY 7 -1 38.632 0.0 0.0 3.3753 0.0 0.0 279.049211058215 0.0 279.049211058215 0.0 26.413960427940992 0.0 0.0 0 1.3182503180159344 0.0 0.0 0.0 V{I|L}PY{I|L}VY 3.3753 - 208 + 1 1.995 49797.2 0.4199999868869781 4707 3578 8283 DOHH2_400M_050219_2,8287 DOHH2_400M_050219_2,8287,EYMKSPLVY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8289 46.603 20.0 3611900.0 25 0 822800.0 + 31642 RRFTEIYEF 9 49 630.822405188728 1259.630257444256 2 630.8224365115166 MULTI CID FTMS 0 0 0 8288 2575316.25 0.5645904202196327 3 -0.1147270202636718 1 Unmodified _RRFTEIYEF_ chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1;nc|ENSG00000165178|A8MVU1|NCF1C;nc|ENSG00000290838|A6NI72|NCF1B 29.081581746732265 0.1611639662936252 2 {I|L}YE{M(Oxidation (M))|F} 4 5 29.725 0.0 0.0 2.3598 0.0 0.0 689.3608930304623 0.0 689.3608930304623 0.0 13.526909627198409 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {I|L}YE{M(Oxidation (M))|F} 2.3598 + + 30 1 1.995 57381.4 1.0 4708 3579 8288 DOHH2_400M_050219_2,8289 DOHH2_400M_050219_2,8289,RRFTEIYEF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8290 46.604 54.0 855890.0 25 0 106110.0 + 31645 RRFTEIYEF 9 45 420.88410160001655 1259.6304754002497 3 420.8838989138603 MULTI CID FTMS 0 0 0 8288 773084.375 0.5164198840369775 3 -0.1147270202636718 2 Unmodified _RRFTEIYEF_ chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1;nc|ENSG00000165178|A8MVU1|NCF1C;nc|ENSG00000290838|A6NI72|NCF1B 17.11289562659939 0.3734572693229295 2 {I|L}YE{M(Oxidation (M))|F} 4 5 33.175 0.0 0.0 2.6337 0.0 0.0 689.3610451745133 0.0 689.3610451745133 0.0 26.18562527100117 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}YE{M(Oxidation (M))|F} 2.6337 + + 19 1 1.995 43772.7 1.0 4709 3579 8288 DOHH2_400M_050219_2,8290 DOHH2_400M_050219_2,8290,RRFTEIYEF False True RRFTEIYEF 46.604469 420.88389891386 47633626.0 8288.0 chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;;ENSG00000158517|ENST00000289473|NCF1;;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;;chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;;nc|ENSG00000158517|P14598-2|NCF1;;nc|ENSG00000290838|A6NI72|NCF1B;;nc|ENSG00000165178|A8MVU1|NCF1C 7.20833683013916 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8291 46.607 132.0 485840.0 25 0 84134.0 11516 GIMKKGYKVPT 11 70 611.3563670908326 1220.698181248465 2 611.3561279177666 MULTI CID FTMS 0 0 0 8288 430208.21875 0.4320195959119847 -8 0.4670906066894531 3 Unmodified _GIMKKGYKVPT_ ENSG00000123064|ENST00000306014|DDX54;nc|ENSG00000123064|Q8TDD1-2|DDX54 2.498486711656943 0.8633599123570009 2 M 1 10 4.6041 0.0 0.0 0.37717 0.0 0.0 646.3510265627214 440.2812899225219 1086.632316485243 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 0.37717 + + 4 + 1 1.995 52543.3 1.0 4710 3579 8288 DOHH2_400M_050219_2,8291 DOHH2_400M_050219_2,8291,GIMKKGYKVPT False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8292 46.621 800.0 138760.0 25 0 26863.0 + 28222 PQPLALRSMLL 11 98 619.8697811734406 1237.7250094136812 2 619.8695556521416 MULTI CID FTMS 0 0 0 8288 204794.71875 0.499450929715574 -7 0.3496475219726562 4 Unmodified _PQPLALRSMLL_ REV__ENSG00000095752|ENST00000264563|IL11;REV__nc|ENSG00000095752|P20809-2|IL11 2.735195868890462 0.8622431031272658 2 Y 1 -1 9.7539 0.0 0.0 0.78805 0.0 0.0 1056.6505750648514 0.0 1056.6505750648514 0.0 5.149816116887216 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.78805 - 8 + 1 1.995 84500.3 0.6899999976158142 4711 3579 8288 DOHH2_400M_050219_2,8292 DOHH2_400M_050219_2,8292,PQPLALRSMLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8293 46.625 196.0 217840.0 25 0 17365.0 + 41005 VMAPRTVLL 9 67 500.304616573433 998.594680213666 2 500.3040649294853 MULTI CID FTMS 0 0 0 8288 198670.75 0.050698479478798 7 -0.3164482116699219 5 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 29.081581746732265 0.1611639662936252 2 VMA 3 6 54.693 0.0 0.0 5.477 0.0 0.0 0.0 694.4269274052568 694.4269274052568 38.01029995663981 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + VMA 5.477 + + 30 + 1 1.995 39315.1 1.0 4712 3579 8288 DOHH2_400M_050219_2,8293 DOHH2_400M_050219_2,8293,VMAPRTVLL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8294 46.639 800.0 213200.0 25 0 17925.0 + 654 AELTEEINKW 10 143 616.811805059437 1231.609057185674 2 616.8110839724541 MULTI CID FTMS 0 0 0 8288 143136.796875 0.4463758679857643 -2 0.0641441345214843 6 Unmodified _AELTEEINKW_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 157.7952019732125 3.245040474617877e-06 2 {[CP]|[EA]}{I|L}TEE{I|L}NKW 10 0 + 101.35 0.0 0.0 8.2288 8.2288 91.578 0.0 0.0 0.0 54.6311366486534 12.306634937682148 12.306634937682148 9.164539485499247 0 2.0994850021680094 0.0 1.5114393726401687 1.652089824126903 + + {[CP]|[EA]}{I|L}TEE{I|L}NKW;{[CP]|[EA]}{I|L}TEE{I|L}GGKW;{[CP]|[EA]}{I|L}TEE{I|L}[HK]Y;{[CP]|[EA]}{I|L}T[NS]G{I|L}NKW;{[CP]|[EA]}{I|L}T[NS]G{I|L}GGKW;{[CP]|[EA]}{I|L}TEE{I|L}[MT][VP];{[CP]|[EA]}{I|L}T{M(Oxidation (M))|F}QQE{I|L}[PG];{[CP]|[EA]}{I|L}T[NS]G{I|L}[HK]Y;{[CP]|[EA]}{I|L}T{M(Oxidation (M))|F}QQA{I|L}PD;{[CP]|[EA]}{I|L}T{M(Oxidation (M))|F}QQAE[VP] 8.2288;7.4846;6.5469;6.4304;5.6892;4.9196;4.7518;4.7485;4.6011;4.5358 +;-;-;-;-;-;-;-;-;- + 20221 + 1 1.995 127203.9 0.550000011920929 4713 3579 8288 DOHH2_400M_050219_2,8294 DOHH2_400M_050219_2,8294,AELTEEINKW True True AELTEEINKW 46.638588 616.811083972454 1585814.25 8288.0 nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;nc|ENSG00000072571|O75330-4|HMMR;;ENSG00000072571|ENST00000393915|HMMR 7.909632841746013 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8295 46.652 800.0 185520.0 25 0 16561.0 + 16707 KESTLHLVL 9 118 520.3109130671952 1038.6072732011903 2 520.3113891482353 MULTI CID FTMS 0 0 0 8288 98416.78125 0.2642035530526716 -5 0.21893310546875 7 Unmodified _KESTLHLVL_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 99.79894945604345 0.0109923542231827 2 GE[Y{M(Oxidation (M))|F}]K{I|L}V{I|L} 8 5 50.701 0.0 0.0 4.8817 0.0 0.0 71.07429701972812 0.0 71.07429701972812 0.0 23.84151715195152 0.0 0.0 0 1.4698565171985374 0.0 0.91944517631652 0.8494850021680094 GE[Y{M(Oxidation (M))|F}]K{I|L}V{I|L} 4.8817 - 475 1 1.995 116217.4 0.4399999976158142 4714 3579 8288 DOHH2_400M_050219_2,8295 DOHH2_400M_050219_2,8295,KESTLHLVL True True KESTLHLVL 46.652424 520.311389148235 1906838.25 8288.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC;;ENST00000392399.3_1_2:137087013-137087097:-|nuORF 4.394403060277303 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8297 46.657 54.0 786000.0 25 0 203230.0 + 37843 TLTSKLYSL 9 68 513.297596696144 1024.5806404590878 2 513.2976562380791 MULTI CID FTMS 0 0 0 8296 840810.1875 0.3626979854394139 3 -0.064483642578125 1 Unmodified _TLTSKLYSL_ ENSG00000184076|ENST00000330029|UQCR10;nc|ENSG00000184076|Q9UDW1-2|UQCR10 29.081581746732265 0.1611639662936252 2 [{I|L}T][KS]YS{I|L}[{I|L}T] 9 4 + 56.347 0.0 0.0 5.4995 5.4995 89.081 0.0 0.0 0.0 15.104765324935698 14.976884018817245 14.976884018817245 20.44068044350275 0 0.5 2.0 1.5994850021680094 0.0 [{I|L}T][KS]YS{I|L}[{I|L}T];{[TV]|[{I|L}S]}[KT]YS{I|L}[{I|L}T];{[TV]|[{I|L}S]}[YK]TS{I|L}[{I|L}T] 5.4995;3.5045;2.6243 -;-;- 164 1 1.995 35611.8 1.0 4715 3580 8296 DOHH2_400M_050219_2,8297 DOHH2_400M_050219_2,8297,TLTSKLYSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8298 46.66 108.0 571980.0 25 0 58372.0 + 32811 SEFIDSQRVW 10 62 633.809392975791 1265.6042330183818 2 633.8092529177666 MULTI CID FTMS 0 0 0 8296 411466.34375 0.2460588861396444 5 -0.1773643493652343 2 Unmodified _SEFIDSQRVW_ ENSG00000174231|ENST00000304992|PRPF8;ENST00000572445.1_1_17:1564459-1565038:-|nuORF 45.739877483867886 0.1051543674217965 2 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}D{[QS]|[NT]}RVW 10 0 + 51.431 0.0 0.0 4.0638 4.0638 82.948 0.0 0.0 0.0 33.69382430541138 7.129843661361406 7.129843661361406 17.17483944213906 0 1.5 0.0 0.0 0.4247425010840047 + + {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}D{[QS]|[NT]}RVW;{[CT]|[{M(Oxidation (M))|F}G]}VR{[QS]|[NT]}D{I|L}M[DV];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}D{[QS]|[NT]}[QA]{[QN]|[E{I|L}]|[KN]};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}RNRM[DV];{[ES]|[DT]|[{I|L}C]}[RN]{I|L}{M(Oxidation (M))|F}RM[DV];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}RN{[ES]|[DT]|[{I|L}C]}VW;{[ES]|[DT]|[{I|L}C]}[RN]{M(Oxidation (M))|F}R{I|L}M[DV];{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[VG]{[WT]|[RM]}RVW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}R{[WT]|[RM]}[VG]VW;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}RGGRM[DV] 4.0638;2.7067;2.5078;2.4981;2.2814;2.2727;2.1802;2.1075;2.1075;1.774 +;-;-;-;-;-;-;-;-;- + 255 + 1 1.995 53591.4 1.0 4716 3580 8296 DOHH2_400M_050219_2,8298 DOHH2_400M_050219_2,8298,SEFIDSQRVW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8299 46.673 800.0 77080.0 25 0 7577.4 + -1 VQTMKLCLKK 10 97 604.348357497048 1206.682162060896 2 604.3486816287041 MULTI CID FTMS 0 0 0 8296 113940.4140625 0.4644287087046693 -4 0.1466331481933593 3 Oxidation (M) _VQTM(Oxidation (M))KLCLKK_ REV__ENSG00000141161|ENST00000394570|UNC45B;REV__nc|ENSG00000141161|Q8IWX7-2|UNC45B;REV__nc|ENSG00000141161|Q8IWX7|UNC45B 3.2813086475875832 0.7114585191678878 2 KHH 3 -1 13.2 0.0 0.0 1.0939 0.0 0.0 786.4286366193375 0.0 786.4286366193375 0.0 0.1009061466849221 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 KHH 1.0939 - 23 1 1.995 49279.6 0.4900000095367431 4717 3580 8296 DOHH2_400M_050219_2,8299 DOHH2_400M_050219_2,8299,VQTMKLCLKK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8301 46.678 46.0 876780.0 25 0 194210.0 + -1 QTDLGMAQEM 10 65 578.2368447216012 1154.4591365100025 2 578.2368652224541 MULTI CID FTMS 0 0 0 8300 1143427.5 0.7020031150101819 2 -0.0435714721679687 1 2 Oxidation (M) _QTDLGM(Oxidation (M))AQEM(Oxidation (M))_ REV__ENSG00000156206|ENST00000286732|CFAP161 8.155526934196011 0.6889124077178598 2 YY 2 -1 17.959 0.0 0.0 1.5556 0.0 0.0 810.3223697075232 0.0 810.3223697075232 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 YY 1.5556 - 55 + 1 1.995 37182.3 1.0 4718 3581 8300 DOHH2_400M_050219_2,8301 DOHH2_400M_050219_2,8301,QTDLGMAQEM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8302 46.685 383.0 198240.0 25 0 29641.0 + 29056 QEIPVNVRF 9 87 551.3062874212299 1100.5980219092596 2 551.3060180544853 MULTI CID FTMS 0 0 0 8300 137039.796875 0.2418618961496002 4 -0.1564521789550781 2 Unmodified _QEIPVNVRF_ ENSG00000133313|ENST00000324262|CNDP2 58.6788170122104 0.0268135626297836 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 3 6 34.947 0.0 0.0 3.1753 0.0 0.0 0.0 727.3899279974033 727.3899279974033 18.458931237911 0.0 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.6747425010840047 + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 3.1753 + + 113 1 1.995 62259.3 1.0 4719 3581 8300 DOHH2_400M_050219_2,8302 DOHH2_400M_050219_2,8302,QEIPVNVRF True True QEIPVNVRF 46.685357 551.306018054485 6375100.0 8300.0 ENSG00000133313|ENST00000324262|CNDP2 5.249105612436931 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8303 46.699 800.0 121450.0 25 0 15263.0 + 9284 FIDASRLVY 9 97 542.2954360982121 1082.576319263224 2 542.2955810427666 MULTI CID FTMS 0 0 0 8300 117967.359375 1.0 0 0.0 3 Unmodified _FIDASRLVY_ ENSG00000044115|ENST00000302763|CTNNA1;ENSG00000066032|ENST00000402739|CTNNA2;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2 43.9818466556824 0.0535980856389242 2 SAD{I|L}E 5 7 44.508 0.0 0.0 4.1113 0.0 0.0 549.326952049025 0.0 549.326952049025 0.0 17.825834421237516 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 SAD{I|L}E 4.1113 - 234 1 1.995 78957.6 0.4900000095367431 4720 3581 8300 DOHH2_400M_050219_2,8303 DOHH2_400M_050219_2,8303,FIDASRLVY True True FIDASRLVY 46.699188 542.295581042767 563197.9375 8300.0 ENSG00000044115|ENST00000302763|CTNNA1;;nc|ENSG00000044115|P35221-3|CTNNA1;;ENSG00000066032|ENST00000402739|CTNNA2;;nc|ENSG00000044115|P35221-2|CTNNA1;;nc|ENSG00000066032|P26232-6|CTNNA2;;nc|ENSG00000066032|P26232-2|CTNNA2;;nc|ENSG00000066032|P26232-5|CTNNA2;;nc|ENSG00000066032|P26232-4|CTNNA2;;nc|ENSG00000066032|P26232-3|CTNNA2 5.583466053009033 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8304 46.713 800.0 110240.0 25 0 21541.0 35306 SSRLILEKHVQ 11 98 655.3825762091127 1308.7505994850253 2 655.3821899294853 MULTI CID FTMS 0 0 0 8300 116081.3046875 0.3794202602928396 -10 0.5421409606933594 4 Unmodified _SSRLILEKHVQ_ ENSG00000143373|ENST00000336715|ZNF687;ENST00000426871.1_1_1:151262664-151263682:+|nuORF 2.498486711656943 0.8633599123570009 2 {M(Oxidation (M))|F} 1 11 3.4949 0.0 0.0 0.26704 0.0 0.0 752.4107079828754 406.2755221002563 1158.6862300831317 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.26704 - 25 + 1 1.995 83498.9 0.5 4721 3581 8300 DOHH2_400M_050219_2,8304 DOHH2_400M_050219_2,8304,SSRLILEKHVQ False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8307 46.724 256.0 258260.0 25 0 16252.0 + 737 AEQDLIREL 9 87 543.7926479661794 1085.5707429991587 2 543.7928954958916 MULTI CID FTMS 0 0 0 8306 211611.890625 0.6705190398309221 -1 0.0038948059082031 1 Unmodified _AEQDLIREL_ ENSG00000125124|ENST00000245157|BBS2;ENST00000561853.1_1_16:56536201-56536626:-|nuORF;ENST00000561951.5_1_16:56535647-56545169:-|nuORF;ENST00000565781.5_1_16:56536201-56536402:-|nuORF 39.21299971606389 0.0797768173001226 2 {[CP]|[EA]}QD{I|L}VV{I|L}EA 10 4 + 52.089 0.0 0.0 4.7983 4.7983 83.739 0.0 0.0 0.0 4.375390091284217 27.201140738196017 4.375390091284217 9.530162782510487 0 1.924742501084005 0.0 0.0 0.4247425010840047 {[CP]|[EA]}QD{I|L}VV{I|L}EA;{[CP]|[EA]}QD{I|L}RRQA;{[CP]|[EA]}[AG]D{I|L}VV{I|L}EA;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[R{I|L}]E{I|L}EA;{[CP]|[EA]}[AG]D{I|L}RRQA;{[CP]|[EA]}QD{I|L}RR[AG]A;{[CP]|[EA]}QD{I|L}VVA{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}{[CP]|[EA]}{I|L}VV{I|L}EA;{[CP]|[EA]}QD{I|L}{I|L}R{[QN]|[E{I|L}]|[KN]};[PG]{[CA]|SS}D{I|L}VV{I|L}EA 4.7983;3.9204;3.5628;3.2189;3.0721;3.0721;2.9088;2.8682;2.8329;2.805 -;-;-;-;-;-;-;-;+;- + 373 1 1.995 59630.5 1.0 4722 3583 8306 DOHH2_400M_050219_2,8307 DOHH2_400M_050219_2,8307,AEQDLIREL True True AEQDLIREL 46.724225 543.792895495892 1814414.5 8306.0 ENSG00000125124|ENST00000245157|BBS2;;ENST00000561853.1_1_16:56536201-56536626:-|nuORF;;ENST00000561951.5_1_16:56535647-56545169:-|nuORF;;ENST00000565781.5_1_16:56536201-56536402:-|nuORF 5.528539975484212 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8308 46.738 800.0 217620.0 25 0 17203.0 -1 0 133 627.9202414730476 1880.7388950193424 3 628.2548705935478 MULTI CID FTMS 0 0 0 8306 123375.8046875 0.9885308137980524 1 -0.0349693298339843 2 2 [HT]D{M(Oxidation (M))|F}A[WP]YDTY{I|L}TDH 15 -1 [HT]D{M(Oxidation (M))|F}A[WP]Y + + 59.14 12.784 1.2566 3.1445 3.1445 49.14 0.0 0.0 0.0 0.0 33.59045337627234 0.0 0.0 0 1.3807196863200843 0.0 1.6184151806525389 0.0 [HT]D{M(Oxidation (M))|F}A[WP]YDTY{I|L}TDH 3.1445 - 1975 + 1 1.995 136081.3 0.5299999713897705 4723 3583 8306 DOHH2_400M_050219_2,8308 DOHH2_400M_050219_2,8308, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8309 46.752 800.0 127210.0 25 0 12643.0 + 25184 MSRTLQSL 8 130 468.25132286890266 934.4880928046052 2 468.2504455447197 MULTI CID FTMS 0 0 0 8306 94811.0 0.9632637951066758 -1 0.0038948059082031 3 Unmodified _MSRTLQSL_ REV__ENSG00000136770|ENST00000376980|DNAJC1 24.020572477871973 0.5389365498350341 2 [{M(Oxidation (M))|F}V]Q{I|L}{[C(Carbamidomethyl (C))G]|[NC]}V{I|L} 8 -1 + 30.328 0.0 0.0 3.2454 3.2454 73.436 0.0 0.0 0.0 4.626524973814199 5.023656471886326 4.626524973814199 6.264100213633768 0 0.0 2.0 0.0 0.6505149978319906 [{M(Oxidation (M))|F}V]Q{I|L}{[C(Carbamidomethyl (C))G]|[NC]}V{I|L};[{M(Oxidation (M))|F}V]Q[DG][{I|L}T]R;{[TV]|[{I|L}S]}RMTQS{I|L};[{M(Oxidation (M))|F}V][AG]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}V{I|L};{[TV]|[{I|L}S]}RMT[AG]S{I|L};[{M(Oxidation (M))|F}V]Q{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TA];[AG][YR]{I|L}Q{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V][AG]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TA] 3.2454;2.575;2.4367;2.2542;1.4455;1.2389;0.88855;0.24771 -;-;-;-;-;-;-;- 151 + 1 1.995 80356.7 0.9800000190734864 4724 3583 8306 DOHH2_400M_050219_2,8309 DOHH2_400M_050219_2,8309,MSRTLQSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8311 46.757 78.0 606360.0 25 0 93961.0 + 25476 NEKPVGSFW 9 94 532.2641761800024 1062.5137994268048 2 532.2640869021416 MULTI CID FTMS 0 0 0 8310 605540.6875 0.8697364529112175 3 -0.2126045227050781 1 Unmodified _NEKPVGSFW_ ENSG00000136108|ENST00000258607|CKAP2;nc|ENSG00000136108|Q8WWK9-4|CKAP2;nc|ENSG00000136108|Q8WWK9-6|CKAP2;nc|ENSG00000136108|Q8WWK9|CKAP2 41.8396318013385 0.0653578398400075 2 [KP]D{M(Oxidation (M))|F}KENW 8 7 + 44.048 0.0 0.0 4.1456 4.1456 69.745 0.0 0.0 0.0 1.34698573897456 30.53064865473278 1.34698573897456 0.796896906561031 0 0.4247425010840047 0.0 1.110924374808178 0.0 [KP]D{M(Oxidation (M))|F}KENW;[KP]DK{M(Oxidation (M))|F}ENW;[KP]D{M(Oxidation (M))|F}KEGGW;[KP]DK{M(Oxidation (M))|F}EGGW;[TA][PA]{M(Oxidation (M))|F}KENW;[TA][PA]K{M(Oxidation (M))|F}ENW;[TA][PA]{M(Oxidation (M))|F}KEGGW;{[CT]|[{M(Oxidation (M))|F}G]}[HK]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}W;[TA][PA]K{M(Oxidation (M))|F}EGGW;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}[WR]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]} 4.1456;4.0706;3.2739;3.1989;3.1471;3.0721;2.2805;2.2511;2.2055;1.8928 -;-;-;-;-;-;-;-;-;- 151 1 1.995 41370.4 1.0 4725 3584 8310 DOHH2_400M_050219_2,8311 DOHH2_400M_050219_2,8311,NEKPVGSFW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8312 46.771 800.0 171560.0 25 0 9034.8 + 6190 DTEFPNFKY 9 135 580.7667641827818 1159.5189754323635 2 580.7670776247978 MULTI CID FTMS 0 0 0 8310 171711.3125 0.2452503505290361 -4 0.0994529724121093 2 Unmodified _DTEFPNFKY_ ENSG00000132383|ENST00000254719|RPA1 85.27202061508552 0.0162393975915471 2 {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY 9 0 + 55.486 0.0 0.0 4.7852 4.7852 80.872 0.0 0.0 0.0 33.09008836194643 8.282957030980711 8.282957030980711 8.877268672201453 0 0.9604093769761876 0.0 0.4247425010840047 0.3252574989159953 + + {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{I|L}MN{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PGG{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PTP[PA]W;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN[YK]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}E{I|L}MGG{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}Y[KQ]{[ET]|[MV]};{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}VVC(Carbamidomethyl (C))KY;{[ES]|[DT]|[{I|L}C]}E{I|L}MTP[PA]W;{[ES]|[DT]|[{I|L}C]}E{I|L}A{[CA]|SS}{M(Oxidation (M))|F}KY 4.7852;4.0196;3.9911;3.4693;3.2849;3.2255;3.1962;3.1104;2.9842;2.814 +;-;-;-;-;-;-;-;-;- + 1372 + 1 1.995 104320.8 0.4300000071525574 4726 3584 8310 DOHH2_400M_050219_2,8312 DOHH2_400M_050219_2,8312,DTEFPNFKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8313 46.784 800.0 101070.0 25 0 10982.0 + 25814 NKSYELFL 8 108 507.2693248742974 1012.5240968153948 2 507.2687255740166 MULTI CID FTMS 0 0 0 8310 89907.2734375 1.0 0 0.0 3 Unmodified _NKSYELFL_ REV__ENSG00000133805|ENST00000396553|AMPD3;REV__ENST00000534047.5_1_11:10518329-10527428:+|nuORF;REV__nc|ENSG00000133805|Q01432-3|AMPD3;REV__nc|ENSG00000133805|Q01432-4|AMPD3;REV__nc|ENSG00000133805|Q01432-5|AMPD3;REV__nc|ENSG00000133805|Q01432-6|AMPD3 36.12702656103203 0.299085846329477 2 {[QN]|[E{I|L}]|[KN]}SEY{I|L}{M(Oxidation (M))|F}{I|L} 8 -1 + 52.731 0.0 0.0 5.2078 5.2078 56.333 0.0 0.0 0.0 17.689549981487076 28.379231027444405 17.689549981487076 0.0 0 1.1677353201839438 1.0457574905606752 0.75 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}SEY{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}ESY{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SYE{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SE{I|L}Y{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}ES{I|L}Y{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SE{I|L}{M(Oxidation (M))|F}Y{I|L};{[QN]|[E{I|L}]|[KN]}ES{I|L}{M(Oxidation (M))|F}Y{I|L};{[QN]|[E{I|L}]|[KN]}SEY{M(Oxidation (M))|F}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}ESY{M(Oxidation (M))|F}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}SY{M(Oxidation (M))|F}{I|L} 5.2078;5.2078;4.7632;4.588;4.588;3.7608;3.7608;3.7333;3.7333;3.7094 -;-;+;-;-;-;-;-;-;- + 589 1 1.995 64753.9 0.4099999964237213 4727 3584 8310 DOHH2_400M_050219_2,8313 DOHH2_400M_050219_2,8313,NKSYELFL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8314 46.798 800.0 111830.0 25 0 5175.3 + 6886 EEEPLNIHSF 10 109 607.7873105046203 1213.5600680760406 2 607.7861205935478 MULTI CID FTMS 0 0 0 8310 85791.4609375 0.98030928736962 -1 0.0349693298339843 4 Unmodified _EEEPLNIHSF_ ENSG00000180376|ENST00000394672|CCDC66;nc|ENSG00000180376|A2RUB6-3|CCDC66 99.7552728972412 0.0086345419122624 2 EEEP{I|L}N{I|L}HS{M(Oxidation (M))|F} 10 0 + 88.674 0.0 0.0 7.3069 7.3069 93.164 0.0 0.0 0.0 22.754537344402905 20.03083433768431 20.03083433768431 12.051794385463625 0 0.6421590589602533 1.6989700043360187 1.9802046884880933 0.2887254899964357 + + EEEP{I|L}N{I|L}HS{M(Oxidation (M))|F};EEEP{I|L}GG{I|L}HS{M(Oxidation (M))|F};EEEP{I|L}N{I|L}HAY;EEEP{I|L}GG{I|L}HAY;[{I|L}P][YE]N{I|L}PE[HC];[{I|L}P]N[YE]{I|L}PE[HC];[{I|L}P]N{I|L}HS{M(Oxidation (M))|F}{M(Oxidation (M))|F}[HC];[{I|L}P]N{I|L}[YE]PE[HC];[{I|L}P]N{I|L}HS{M(Oxidation (M))|F}EEE;[{M(Oxidation (M))|F}E][HA]{I|L}N{I|L}HS{M(Oxidation (M))|F} 7.3069;6.3138;5.6563;4.6632;4.5442;4.5043;4.046;3.8732;3.8563;3.8548 +;-;-;-;-;-;-;-;-;- + 720 + 1 1.995 71648.7 0.4399999976158142 4728 3584 8310 DOHH2_400M_050219_2,8314 DOHH2_400M_050219_2,8314,EEEPLNIHSF True True EEEPLNIHSF 46.798158 607.786120593548 575141.4375 8310.0 nc|ENSG00000180376|A2RUB6-3|CCDC66;;ENSG00000180376|ENST00000394672|CCDC66 8.652614911397299 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8315 46.802 210.0 296980.0 25 0 48146.0 + 26005 NLVNFRREK 9 73 588.3353863294454 1174.6562197256908 2 588.3352538943291 MULTI CID FTMS 0 0 0 8310 194678.453125 0.8841135158003253 2 -0.1628570556640625 5 Unmodified _NLVNFRREK_ REV__ENSG00000164512|ENST00000341048|ANKRD55;REV__nc|ENSG00000164512|Q3KP44-2|ANKRD55;REV__nc|ENSG00000164512|Q3KP44-3|ANKRD55 1.844237919475145 0.850302753031785 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.995 54628.3 1.0 4729 3584 8310 DOHH2_400M_050219_2,8315 DOHH2_400M_050219_2,8315,NLVNFRREK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8316 46.816 800.0 180000.0 25 0 16523.0 + 8517 ETEEGIYWRY 10 111 673.3068549573647 1344.5991569815294 2 673.3069335818291 MULTI CID FTMS 0 0 0 8310 85473.0859375 0.3448497319449433 -2 0.0388641357421875 6 Unmodified _ETEEGIYWRY_ ENSG00000131650|ENST00000303746|KREMEN2;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;nc|ENSG00000131650|Q8NCW0-3|KREMEN2;nc|ENSG00000131650|Q8NCW0-4|KREMEN2;nc|ENSG00000131650|Q8NCW0-5|KREMEN2;nc|ENSG00000131650|Q8NCW0-6|KREMEN2 89.40071534611396 0.0093765175072318 2 ETEEG{I|L}YWRY 10 0 + 102.69 0.0 0.0 7.6375 7.6375 85.667 0.0 0.0 0.0 24.509194129180106 4.121804477866476 4.121804477866476 4.121804477866476 0 0.809894379144197 1.2218487496163564 0.7742275032520141 0.8539171939081174 + + ETEEG{I|L}YWRY;ETEEG{I|L}YWYR;ETEEG{I|L}Y{I|L}[QT]Y;ETEEG{I|L}Y[RH][DP];ETEEY{[VA]|[{I|L}G]}WRY;[DP][TP]{I|L}Y{I|L}GEE[DP];ETEEY{[VA]|[{I|L}G]}WYR;ETEEY{[VA]|[{I|L}G]}{I|L}[QT]Y;ETEEY{[VA]|[{I|L}G]}[RH][DP];[PS]PE{I|L}Y{I|L}GEE[DP] 7.6375;7.331;6.7196;6.3653;5.7431;5.7083;5.4365;5.0524;4.698;4.6259 +;-;-;-;-;-;-;-;-;- + 1239 + 1 1.995 108438.5 0.4399999976158142 4730 3584 8310 DOHH2_400M_050219_2,8316 DOHH2_400M_050219_2,8316,ETEEGIYWRY True True ETEEGIYWRY 46.815985 673.306933581829 1649370.375 8310.0 ENSG00000131650|ENST00000303746|KREMEN2;;nc|ENSG00000131650|Q8NCW0-5|KREMEN2;;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;;nc|ENSG00000131650|Q8NCW0-4|KREMEN2;;nc|ENSG00000131650|Q8NCW0-6|KREMEN2;;nc|ENSG00000131650|Q8NCW0-3|KREMEN2 8.296302954355875 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8317 46.83 800.0 87443.0 25 0 26581.0 36905 TERERMGLLAD 11 60 430.8881555522122 0 430.8880798220634 PEAK CID FTMS 0 0 0 8310 80715.578125 0.5754534826273837 -15 0.8026390075683594 7 Unmodified _TERERMGLLAD_ ENSG00000197774|ENST00000568449|EME2;nc|ENSG00000197774|A4GXA9-2|EME2 2.9952420565917617 0.4761840153648598 2 S 1 11 0.48455 0.0 0.0 0.056359 0.0 0.0 651.8155739444651 117.8911608331664 769.7067347776315 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.056359 - 1 + 1 1.995 61299.4 0.3700000047683716 4731 3584 8310 DOHH2_400M_050219_2,8317 DOHH2_400M_050219_2,8317,TERERMGLLAD False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8319 46.835 50.0 640170.0 25 0 91574.0 + 182 AANPHSFVF 9 61 495.2458316263696 988.4771103195392 2 495.2456237673759 MULTI CID FTMS 0 0 0 8318 940078.4375 0.4706429359761234 2 -0.1346931457519531 1 Unmodified _AANPHSFVF_ ENSG00000130810|ENST00000253107|PPAN;nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN 43.85829265575387 0.0542763391141878 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQS{M(Oxidation (M))|F}V{M(Oxidation (M))|F} 8 4 + 47.128 0.0 0.0 4.7677 4.7677 85.823 0.0 0.0 0.0 3.4678748622465605 39.380843058906834 3.4678748622465605 18.088774899272405 0 0.9247425010840048 0.0 0.8494850021680094 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQS{M(Oxidation (M))|F}V{M(Oxidation (M))|F};[HS]{M(Oxidation (M))|F}PNAAV{M(Oxidation (M))|F};[HS]{M(Oxidation (M))|F}PQQV{M(Oxidation (M))|F};[HS]{M(Oxidation (M))|F}VPQQ{M(Oxidation (M))|F};{[QG]|[NA]}WPNAAV{M(Oxidation (M))|F};{[QG]|[NA]}WVPQQ{M(Oxidation (M))|F};{[QG]|[NA]}WPQQV{M(Oxidation (M))|F};[HS]{M(Oxidation (M))|F}PVQQ{M(Oxidation (M))|F};{[QG]|[NA]}WPVQQ{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV]PQQ{M(Oxidation (M))|F} 4.7677;2.9377;2.8915;2.3869;2.3802;2.3351;2.3339;2.2605;2.2087;2.0126 -;-;-;-;-;-;-;-;-;- 177 1 1.995 30238.1 1.0 4732 3585 8318 DOHH2_400M_050219_2,8319 DOHH2_400M_050219_2,8319,AANPHSFVF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8320 46.837 89.0 332780.0 25 0 64529.0 20046 LIPFMPLL 8 51 472.2884274497442 942.5623019662884 2 472.2879821658134 MULTI CID FTMS 0 0 0 8318 467927.03125 0.4333589619156527 4 -0.2880973815917969 2 Unmodified _LIPFMPLL_ ENSG00000091428|ENST00000397081|RAPGEF4;nc|ENSG00000091428|Q8WZA2-2|RAPGEF4;nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;nc|ENSG00000091428|Q8WZA2-5|RAPGEF4 0.7936320650641473 0.8195151834710337 2 {M(Oxidation (M))|F} 1 7 5.4846 0.0 0.0 0.58188 0.0 0.0 350.2292464016384 442.2432039850219 792.4724503866603 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.58188 + + 1 + 1 1.995 29190.2 1.0 4733 3585 8318 DOHH2_400M_050219_2,8320 DOHH2_400M_050219_2,8320,LIPFMPLL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8321 46.839 71.0 734050.0 25 0 90559.0 38063 TPGSGSIY 8 69 391.1887491120291 780.3629452908582 2 391.1886169314384 MULTI CID FTMS 0 0 0 8318 848129.1875 1.0 0 0.0 3 Unmodified _TPGSGSIY_ ENSG00000073712|ENST00000341590|FERMT2;nc|ENSG00000073712|Q96AC1-2|FERMT2;nc|ENSG00000073712|Q96AC1-3|FERMT2 2.577480529830294 0.808687252328423 2 MA{M(Oxidation (M))|F}[H{I|L}]Y 6 6 + 41.604 0.0 0.0 5.3314 5.3314 89.229 0.0 0.0 0.0 8.900925144087779 3.812281309285624 3.812281309285624 26.921305798057134 0 0.0 1.6989700043360187 0.0 0.0 MA{M(Oxidation (M))|F}[H{I|L}]Y;{[DS]|[MA]|[CV]|TT}[KT]{M(Oxidation (M))|F}[PS] 5.3314;1.8815 -;- 46 + 1 1.995 47063.0 1.0 4734 3585 8318 DOHH2_400M_050219_2,8321 DOHH2_400M_050219_2,8321,TPGSGSIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8322 46.852 800.0 182630.0 25 0 6917.9 -1 0 136 981.801277542479 2942.382003227637 3 982.1359130740166 MULTI CID FTMS 0 0 0 8318 194915.40625 0.6359880329335984 -1 0.077911376953125 4 2 [MN]PME[MN]D 8 -1 56.515 0.0 0.0 1.9207 0.0 0.0 0.0 1976.9811998846096 1976.9811998846096 22.88241865052136 0.0 0.0 0.0 0 1.305462187404089 2.0 0.0 0.805462187404089 [MN]PME[MN]D 1.9207 - 906 + 1 1.995 102825.8 0.5899999737739563 4735 3585 8318 DOHH2_400M_050219_2,8322 DOHH2_400M_050219_2,8322, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8323 46.857 264.0 167170.0 25 0 29365.0 + 28504 PTKRKALF 8 75 480.801610520472 959.588668107744 2 480.8016235232353 MULTI CID FTMS 0 0 0 8318 189336.65625 0.4042723695472147 4 -0.2880973815917969 5 Unmodified _PTKRKALF_ REV__ENSG00000126883|ENST00000359428|NUP214;REV__ENST00000489260.1_1_9:134038513-134039545:+|nuORF;REV__ENST00000525980.5_1_9:134025776-134070755:+|nuORF;REV__nc|ENSG00000126883|P35658-2|NUP214;REV__nc|ENSG00000126883|P35658-3|NUP214;REV__nc|ENSG00000126883|P35658-4|NUP214;REV__nc|ENSG00000126883|P35658-5|NUP214 2.577480529830294 0.808687252328423 2 {I|L} 1 -1 11.594 0.0 0.0 1.2082 0.0 0.0 828.4935428409457 0.0 828.4935428409457 0.0 11.593793813122062 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2082 + + 4 + 1 1.995 44137.7 1.0 4736 3585 8318 DOHH2_400M_050219_2,8323 DOHH2_400M_050219_2,8323,PTKRKALF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8324 46.866 467.0 152950.0 25 0 15337.0 + 2702 ATELQSMMY 9 110 537.2356941147465 1072.4568352962929 2 537.2360717654228 MULTI CID FTMS 0 0 0 8318 185301.390625 0.7454333342447526 -1 0.077911376953125 6 Unmodified _ATELQSMMY_ ENSG00000196284|ENST00000371459|SUPT3H 34.10243960390752 0.1078313939113124 2 M[W{I|L}]MY 5 6 22.218 0.0 0.0 2.0717 0.0 0.0 330.1250614699241 0.0 330.1250614699241 0.0 -0.8282826487027641 -0.8282826487027641 0.0 0 0.0 0.0 0.0 0.0 M[W{I|L}]MY 2.0717 - 226 + 1 1.995 57687.8 1.0 4737 3585 8318 DOHH2_400M_050219_2,8324 DOHH2_400M_050219_2,8324,ATELQSMMY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8325 46.878 708.0 170160.0 25 0 21359.0 8809 EYARLPKLYL 10 106 633.3690621411636 1264.723571349127 2 633.3694946169853 MULTI CID FTMS 0 0 0 8318 133688.203125 0.3169979356710981 10 -0.5969810485839844 7 Unmodified _EYARLPKLYL_ ENSG00000156650|ENST00000287239|KAT6B;ENST00000490365.1_1_10:76737066-76741701:+|nuORF;nc|ENSG00000156650|Q8WYB5-2|KAT6B;nc|ENSG00000156650|Q8WYB5-3|KAT6B 5.731851221503515 0.7001233259664787 2 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[R{I|L}]NR{M(Oxidation (M))|F} 8 7 23.294 0.0 0.0 1.8418 0.0 0.0 0.0 212.16937982684968 212.16937982684968 11.699784405891762 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.2614393726401688 0.0 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[R{I|L}]NR{M(Oxidation (M))|F} 1.8418 - 218 1 1.995 97372.5 1.0 4738 3585 8318 DOHH2_400M_050219_2,8325 DOHH2_400M_050219_2,8325,EYARLPKLYL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8326 46.888 578.0 224890.0 25 0 14587.0 + 4750 DEIENVAKQF 10 143 596.7953822289379 1191.5762115246755 2 596.7957031130791 MULTI CID FTMS 0 0 0 8318 125808.7265625 0.8150953154605604 -1 0.077911376953125 8 Unmodified _DEIENVAKQF_ ENSG00000111726|ENST00000229329|CMAS;nc|ENSG00000111726|Q8NFW8-2|CMAS 114.18643581695662 0.001143558078943 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ENVAKQ{M(Oxidation (M))|F} 10 0 + 78.868 0.0 0.0 6.6188 6.6188 88.729 0.0 0.0 0.0 41.79297219607513 13.521825181113629 13.521825181113629 9.164539485499262 0 1.8807196863200843 0.0 0.3494850021680094 1.8252574989159955 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ENVAKQ{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EGGVAKQ{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ENVAK[AG]{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EGGVAK[AG]{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[QP]NVAKQ{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[QP]GGVAKQ{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[QP]NVAK[AG]{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EN{I|L}[YT][VP];{[QN]|[E{I|L}]|[KN]}NG{I|L}QY{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}[H{I|L}]VN[QP]{[QD]|[EN]|[WG]|[KD]|[RS]} 6.6188;5.8497;5.5767;4.8106;4.1246;3.3555;3.0826;2.7021;2.1833;2.1583 +;-;-;-;-;-;-;-;-;- + 1303 + 1 1.995 98573.5 1.0 4739 3585 8318 DOHH2_400M_050219_2,8326 DOHH2_400M_050219_2,8326,DEIENVAKQF True True DEIENVAKQF 46.888064 596.795703113079 937592.5625 8318.0 ENSG00000111726|ENST00000229329|CMAS;;nc|ENSG00000111726|Q8NFW8-2|CMAS 8.233636061350504 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8327 46.901 742.0 125090.0 25 0 10079.0 + 19176 LEEKLREY 8 113 540.2910679610651 1078.56758298893 2 540.2903930544853 MULTI CID FTMS 0 0 0 8318 99779.3125 1.0 0 0.0 9 Unmodified _LEEKLREY_ REV__ENSG00000127328|ENST00000247833|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-3|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-4|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-5|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-6|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-7|RAB3IP;REV__nc|ENSG00000127328|Q96QF0|RAB3IP 21.74664581756881 0.5868176546531598 2 {[QN]|[E{I|L}]|[KN]}K[DG]{I|L}{I|L}EY 9 -1 + 55.168 0.0 0.0 5.1149 5.1149 79.639 0.0 0.0 0.0 15.219159051337384 25.324609153403514 15.219159051337384 5.993624753846092 0 0.5 1.3010299956639813 0.0 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}K[DG]{I|L}{I|L}EY;{[QN]|[E{I|L}]|[KN]}E[RK]{I|L}EY;{[QN]|[E{I|L}]|[KN]}K{[RE]|[WV]}{I|L}EY;{[QN]|[E{I|L}]|[KN]}K[DG]{I|L}E{I|L}Y;{[QN]|[E{I|L}]|[KN]}E[RK]E{I|L}Y;[{I|L}T]R[DG]{I|L}{I|L}EY;{[QN]|[E{I|L}]|[KN]}K{[RE]|[WV]}E{I|L}Y;{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}{I|L}{I|L}{I|L}EY;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}{[RE]|[WV]}{I|L}EY;EE{I|L}[RK]{I|L}EY 5.1149;4.5592;4.5143;4.2735;3.7178;3.703;3.6729;3.2102;3.1872;2.8682 -;-;-;-;-;-;-;-;-;- 669 1 1.995 75116.3 1.0 4740 3585 8318 DOHH2_400M_050219_2,8327 DOHH2_400M_050219_2,8327,LEEKLREY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8328 46.915 800.0 104680.0 25 0 9699.8 23825 LVFILYPEAI 10 108 393.23463328908616 1176.6820704674583 3 393.2343627810478 MULTI CID FTMS 0 0 0 8318 98844.1328125 1.0 0 0.0 10 Unmodified _LVFILYPEAI_ ENSG00000103546|ENST00000568943|SLC6A2;nc|ENSG00000103546|P23975-2|SLC6A2;nc|ENSG00000103546|P23975-3|SLC6A2 6.630372943996041 0.695967137280542 2 {I|L} 1 9 19.732 0.0 0.0 1.6769 0.0 0.0 1045.5870825297616 0.0 1045.5870825297616 0.0 7.949238458311267 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L} 1.6769 + + 17 + 1 1.995 71467.2 0.3799999952316284 4741 3585 8318 DOHH2_400M_050219_2,8328 DOHH2_400M_050219_2,8328,LVFILYPEAI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8330 46.92 60.0 856190.0 25 0 198680.0 + 35304 SSRGRPHLRR 10 65 611.3563670908326 1220.698181248465 2 611.3561889529228 MULTI CID FTMS 0 0 0 8329 946360.8125 0.9503454327095826 -1 0.0849456787109375 1 Unmodified _SSRGRPHLRR_ REV__ENST00000286371.7_1_3:141595540-141622555:+|nuORF;REV__ENST00000465172.5_1_3:141595540-141640837:+|nuORF 1.3295316138638542 0.7204866299213272 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 44246.7 1.0 4742 3586 8329 DOHH2_400M_050219_2,8330 DOHH2_400M_050219_2,8330,SSRGRPHLRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8331 46.923 173.0 296800.0 25 0 61041.0 30232 QWRRRPALR 9 61 619.8697811734406 1237.7250094136812 2 619.8695556521416 MULTI CID FTMS 0 0 0 8329 410039.71875 1.0 0 0.0 2 Unmodified _QWRRRPALR_ ENST00000240139.9_1_8:22298692-22298875:+|nuORF 0.6014990680409731 0.8936861360942873 2 K 1 9 3.9794 0.0 0.0 0.32151 0.0 0.0 823.4784711830156 283.1182955377563 1106.596766720772 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.32151 - 1 + 1 1.995 42525.1 1.0 4743 3586 8329 DOHH2_400M_050219_2,8331 DOHH2_400M_050219_2,8331,QWRRRPALR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8332 46.927 183.0 329130.0 25 0 58455.0 + -1 MEQPIKVTEW 10 79 630.822405188728 1259.630257444256 2 630.8215209841728 MULTI CID FTMS 0 0 0 8329 180497.03125 0.0395706332074104 10 -0.5802421569824219 3 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))AGARRLELGE_ ENSG00000173801|ENST00000393931|JUP;ENST00000589036.1_1_17:39927815-39942960:-|nuORF 8.155526934196011 0.8366696279279818 2 RY[RH] 4 -1 16.198 0.0 0.0 1.2859 0.0 0.0 629.32133681465 0.0 629.32133681465 0.0 0.3566687589218276 0.0 0.0 0 0.0 0.0 0.0 0.0 RY[RH] 1.2859 - 47 1 1.995 53218.0 1.0 4744 3586 8329 DOHH2_400M_050219_2,8332 DOHH2_400M_050219_2,8332,MAGARRLELGE False False MEQPIKVTEW 46.927042 630.821520984173 1264854.875 8329.0 ENSG00000173801|ENST00000393931|JUP;;ENST00000589036.1_1_17:39927815-39942960:-|nuORF 1.0982248783111572 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8333 46.937 558.0 165970.0 25 0 13156.0 + 45427 YTDHLQSYVIY 11 82 701.3388749392591 1400.663196945318 2 701.3384277224541 MULTI CID FTMS 0 0 0 8329 173919.21875 0.9310844761062056 -1 0.0849456787109375 4 Unmodified _YTDHLQSYVIY_ ENSG00000090989|ENST00000381295|EXOC1;ENST00000511971.5_1_4:56749994-56766742:+|nuORF;nc|ENSG00000090989|Q9NV70-2|EXOC1 37.07464296494664 0.257459615863268 2 SMY{I|L}QSYV{I|L}Y 10 4 78.608 0.0 0.0 5.6122 0.0 0.0 135.06863600898595 0.0 135.06863600898595 0.0 58.298574470258586 0.0 0.0 0 0.5 0.0 1.274227503252014 0.0 SMY{I|L}QSYV{I|L}Y 5.6122 - 1888 1 1.995 75792.4 1.0 4745 3586 8329 DOHH2_400M_050219_2,8333 DOHH2_400M_050219_2,8333,YTDHLQSYVIY False True YTDHLQSYVIY 46.93684 701.338427722454 1233700.25 8329.0 nc|ENSG00000090989|Q9NV70-2|EXOC1;;ENST00000511971.5_1_4:56749994-56766742:+|nuORF;;ENSG00000090989|ENST00000381295|EXOC1 7.814638137817383 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8334 46.951 800.0 96225.0 25 0 7796.6 + 32309 RYGPQFTL 8 105 491.2614588961308 980.5083648590615 2 491.2615539431572 MULTI CID FTMS 0 0 0 8329 87131.671875 0.6992401611991301 -1 0.0849456787109375 5 Unmodified _RYGPQFTL_ ENSG00000081853|ENST00000394576|PCDHGA2;ENSG00000204956|ENST00000517417|PCDHGA1;ENSG00000240184|ENST00000308177|PCDHGC3;ENSG00000240764|ENST00000252087|PCDHGC5;ENSG00000242419|ENST00000306593|PCDHGC4;ENSG00000253159|ENST00000252085|PCDHGA12;ENSG00000253305|ENST00000520790|PCDHGB6;ENSG00000253485|ENST00000518069|PCDHGA5;ENSG00000253537|ENST00000518325|PCDHGA7;ENSG00000253731|ENST00000517434|PCDHGA6;ENSG00000253767|ENST00000398604|PCDHGA8;ENSG00000253846|ENST00000398610|PCDHGA10;ENSG00000253873|ENST00000398587|PCDHGA11;ENSG00000253910|ENST00000522605|PCDHGB2;ENSG00000253953|ENST00000519479|PCDHGB4;ENSG00000254122|ENST00000398594|PCDHGB7;ENSG00000254221|ENST00000523390|PCDHGB1;ENSG00000254245|ENST00000253812|PCDHGA3;ENSG00000261934|ENST00000573521|PCDHGA9;ENSG00000262209|ENST00000576222|PCDHGB3;ENSG00000262576|ENST00000571252|PCDHGA4;ENSG00000276547|ENST00000617380|PCDHGB5;nc|ENSG00000253873|Q9Y5H2-3|PCDHGA11 48.345845343767074 0.1470278396477103 2 [YR]GPQ{M(Oxidation (M))|F}T{I|L} 8 0 + 56.165 0.0 0.0 5.7281 5.7281 80.724 0.0 0.0 0.0 3.979400086720375 41.01464731531564 3.979400086720375 4.702818301893572 0 0.8807196863200843 0.0 0.3252574989159953 0.5 + + [YR]GPQ{M(Oxidation (M))|F}T{I|L};[{I|L}T]{[MG]|[TS]}AQ{M(Oxidation (M))|F}T{I|L};[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Q{M(Oxidation (M))|F}T{I|L};[YR]GP[AG]{M(Oxidation (M))|F}T{I|L};[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[AG]{M(Oxidation (M))|F}T{I|L};[{I|L}T]{[MG]|[TS]}A[AG]{M(Oxidation (M))|F}T{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}AQ{M(Oxidation (M))|F}T{I|L};{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}Q{M(Oxidation (M))|F}T{I|L};[{M(Oxidation (M))|F}T][C(Carbamidomethyl (C))N]{I|L}{I|L}T{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}A[AG]{M(Oxidation (M))|F}T{I|L} 5.7281;5.2485;5.2018;4.7835;4.2572;3.7995;3.6829;3.6362;2.522;2.2338 +;-;-;-;-;-;-;-;-;- + 384 1 1.995 63929.9 0.3799999952316284 4746 3586 8329 DOHH2_400M_050219_2,8334 DOHH2_400M_050219_2,8334,RYGPQFTL False True RYGPQFTL 46.950655 491.261553943157 581379.1875 8329.0 ENSG00000253485|ENST00000518069|PCDHGA5;;ENSG00000253767|ENST00000398604|PCDHGA8;;ENSG00000081853|ENST00000394576|PCDHGA2;;ENSG00000253305|ENST00000520790|PCDHGB6;;ENSG00000253731|ENST00000517434|PCDHGA6;;ENSG00000253873|ENST00000398587|PCDHGA11;;ENSG00000253846|ENST00000398610|PCDHGA10;;ENSG00000262209|ENST00000576222|PCDHGB3;;ENSG00000253910|ENST00000522605|PCDHGB2;;ENSG00000276547|ENST00000617380|PCDHGB5;;ENSG00000253953|ENST00000519479|PCDHGB4;;nc|ENSG00000253873|Q9Y5H2-3|PCDHGA11;;ENSG00000240764|ENST00000252087|PCDHGC5;;ENSG00000240184|ENST00000308177|PCDHGC3;;ENSG00000204956|ENST00000517417|PCDHGA1;;ENSG00000262576|ENST00000571252|PCDHGA4;;ENSG00000261934|ENST00000573521|PCDHGA9;;ENSG00000254245|ENST00000253812|PCDHGA3;;ENSG00000254221|ENST00000523390|PCDHGB1;;ENSG00000253159|ENST00000252085|PCDHGA12;;ENSG00000253537|ENST00000518325|PCDHGA7;;ENSG00000242419|ENST00000306593|PCDHGC4;;ENSG00000254122|ENST00000398594|PCDHGB7 5.1028157869974775 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8335 46.964 800.0 132640.0 25 0 7715.1 + 2511 ARSDKPIFTL 10 110 574.3284156615316 1146.6422783898631 2 574.3274413943291 MULTI CID FTMS 0 0 0 8329 85256.171875 0.5070249371119939 -2 0.1628570556640625 6 Unmodified _ARSDKPIFTL_ ENSG00000136045|ENST00000412830|PWP1 47.7319792270244 0.0934623409360514 2 {M(Oxidation (M))|F}KP{I|L}{M(Oxidation (M))|F}T{I|L} 7 4 51.897 0.0 0.0 4.526 0.0 0.0 282.167772361525 0.0 282.167772361525 0.0 30.101554088112728 0.0 0.0 0 1.4698565171985374 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}KP{I|L}{M(Oxidation (M))|F}T{I|L} 4.526 - 481 1 1.995 84027.7 0.4000000059604645 4747 3586 8329 DOHH2_400M_050219_2,8335 DOHH2_400M_050219_2,8335,ARSDKPIFTL True True ARSDKPIFTL 46.964486 574.327441394329 1320852.75 8329.0 ENSG00000136045|ENST00000412830|PWP1 6.825120766957601 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8337 46.977 563.0 89717.0 25 0 7099.5 + 7702 ELAELIRAHR 10 80 604.348357497048 1206.682162060896 2 604.3488036990166 MULTI CID FTMS 0 0 0 8336 132236.5 0.5390047723096496 3 -0.2737159729003906 1 Unmodified _ELAELIRAHR_ REV__ENSG00000118193|ENST00000367350|KIF14 3.5964929083625545 0.7100006075494749 2 {[QN]|[E{I|L}]|[KN]}KVE 5 -1 20.662 0.0 0.0 1.7123 0.0 0.0 0.0 605.3264784252948 605.3264784252948 8.879101117075532 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[QN]|[E{I|L}]|[KN]}KVE 1.7123 - 163 1 1.995 42513.7 1.0 4748 3587 8336 DOHH2_400M_050219_2,8337 DOHH2_400M_050219_2,8337,ELAELIRAHR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8338 46.991 800.0 125200.0 25 0 12333.0 + 7004 EEISTVLQY 9 126 541.2747904225371 1080.535027911874 2 541.2750732302666 MULTI CID FTMS 0 0 0 8336 115661.671875 0.6928355347130178 -1 0.0497474670410156 2 Unmodified _EEISTVLQY_ ENSG00000155561|ENST00000285968|NUP205 57.47134341890925 0.0274820932774257 2 EE{I|L}S 4 5 26.141 0.0 0.0 2.4193 0.0 0.0 0.0 619.3114921054865 619.3114921054865 3.2167003028108745 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.274227503252014 0.0 + EE{I|L}S 2.4193 + + 620 1 1.995 79602.6 0.4699999988079071 4749 3587 8336 DOHH2_400M_050219_2,8338 DOHH2_400M_050219_2,8338,EEISTVLQY True True EEISTVLQY 46.990738 541.275073230267 1137054.25 8336.0 ENSG00000155561|ENST00000285968|NUP205 5.541316032409668 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8339 47.005 800.0 147930.0 25 0 22879.0 10269 FQVLPIIVFFS 11 105 655.3825762091127 1308.7505994850253 2 655.3815795779228 MULTI CID FTMS 0 0 0 8336 117897.203125 0.3853556575532031 -4 0.2475738525390625 3 Unmodified _FQVLPIIVFFS_ ENSG00000156222|ENST00000394573|SLC28A1 8.745405648335112 0.8338865417133445 2 {[QG]|[NA]}A{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 6 9 29.799 0.0 0.0 2.2769 0.0 0.0 0.0 668.445581745044 668.445581745044 12.983963277792022 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.9833067407287436 {[QG]|[NA]}A{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 2.2769 - 224 1 1.995 105456.1 0.4900000095367431 4750 3587 8336 DOHH2_400M_050219_2,8339 DOHH2_400M_050219_2,8339,FQVLPIIVFFS False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8340 47.013 475.0 170540.0 25 0 21697.0 + 32956 SELPGNPNAVW 11 109 592.2909703945425 1182.5673878558848 2 592.2905151247978 MULTI CID FTMS 0 0 0 8336 105082.4765625 0.393522236859798 -2 0.1346931457519531 4 Unmodified _SELPGNPNAVW_ ENSG00000189091|ENST00000302516|SF3B3 55.50274090549119 0.0873970505193986 2 [NP]G[NP]AV{[ET]|[MV]}VW 11 7 + 60.595 0.0 0.0 5.124 5.124 79.482 0.0 0.0 0.0 5.791507118637504 9.128498242810998 5.791507118637504 5.791507118637504 0 0.7614393726401688 0.638272163982407 0.0 2.0356668758921828 [NP]G[NP]AV{[ET]|[MV]}VW;{[QV]|[N{I|L}]|[RA]|[KV]}[HD]AV{[ET]|[MV]}VW;[NP]G[NP]A{I|L}{[ES]|[DT]|[{I|L}C]}VW;[NP]GQ[PG]V{[ET]|[MV]}VW;{[MG]|[TS]}[YQ]AV{[ET]|[MV]}VW;[NP]AN[PG]V{[ET]|[MV]}VW;{[QV]|[N{I|L}]|[RA]|[KV]}[HD]A{I|L}{[ES]|[DT]|[{I|L}C]}VW;{[CT]|[{M(Oxidation (M))|F}G]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AV{[ET]|[MV]}VW;[NP]GQ[PG]{I|L}{[ES]|[DT]|[{I|L}C]}VW;{[CT]|[{M(Oxidation (M))|F}G]}V{[ET]|[MV]}VA[WQ]{M(Oxidation (M))|F} 5.124;4.6343;4.4489;4.3986;4.2412;4.1441;3.9591;3.8939;3.7235;3.6248 -;-;-;-;-;-;-;-;-;- 1136 1 1.995 66460.9 1.0 4751 3587 8336 DOHH2_400M_050219_2,8340 DOHH2_400M_050219_2,8340,SELPGNPNAVW True True SELPGNPNAVW 47.012988 592.290515124798 3805947.0 8336.0 ENSG00000189091|ENST00000302516|SF3B3 6.183914979298909 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8341 47.027 800.0 106790.0 25 0 19930.0 + -1 PLYVCKLTF 9 82 570.811866678493 1139.6091804237858 2 570.8109008669853 MULTI CID FTMS 0 0 0 8336 94873.0625 1.0 0 0.0 5 Carbamidomethyl (C) _PLYVC(Carbamidomethyl (C))KLTF_ REV__ENSG00000158683|ENST00000289672|PKD1L1 34.10243960390752 0.1078313939113124 2 Y[QP]{[WT]|[RM]}{I|L}T{M(Oxidation (M))|F} 8 -1 39.174 0.0 0.0 3.4375 0.0 0.0 85.08978469062656 0.0 85.08978469062656 0.0 10.24613421077092 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.805462187404089 Y[QP]{[WT]|[RM]}{I|L}T{M(Oxidation (M))|F} 3.4375 - 240 1 1.995 69328.0 0.4300000071525574 4752 3587 8336 DOHH2_400M_050219_2,8341 DOHH2_400M_050219_2,8341,PLYVCKLTF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8342 47.039 696.0 335700.0 25 0 29939.0 + 33022 SEPDFVAKF 9 155 520.2583260448015 1038.502099156403 2 520.2585937380791 MULTI CID FTMS 0 0 0 8336 85649.0703125 0.0475433063717117 -5 0.2514686584472656 6 Unmodified _SEPDFVAKF_ ENSG00000179933|ENST00000319074|C14orf119 41.8396318013385 0.0653578398400075 2 {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F} 9 0 + 50.36 0.0 0.0 4.8493 4.8493 85.163 0.0 0.0 0.0 7.147642715192504 13.337359645711324 7.147642715192504 13.291812460476244 0 0.4247425010840047 0.0 0.0 0.9559771852360796 + + {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VKA{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}VAKE{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[DP]VAK{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}P[{I|L}T]{M(Oxidation (M))|F}AK{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}AVKE{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[DP]{M(Oxidation (M))|F}VA[Y{I|L}]{[QS]|[NT]};{[ES]|[DT]|[{I|L}C]}PD[RH]{I|L}W;{[ES]|[DT]|[{I|L}C]}PW[{M(Oxidation (M))|F}V]K{M(Oxidation (M))|F};[HD]ERAHK{M(Oxidation (M))|F} 4.8493;3.5694;3.565;3.3569;3.0437;2.9852;2.9189;2.7991;2.7098;2.4395 +;-;-;-;-;-;-;-;-;- + 1086 + 1 1.995 180154.7 1.0 4753 3587 8336 DOHH2_400M_050219_2,8342 DOHH2_400M_050219_2,8342,SEPDFVAKF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8343 47.051 594.0 142510.0 25 0 34513.0 + 37844 TLTSKLYSL 9 87 513.297596696144 1024.5806404590878 2 513.2977783083916 MULTI CID FTMS 0 0 0 8336 89084.3515625 0.0384280725022676 10 -0.6377677917480469 7 Unmodified _TLTSKLYSL_ ENSG00000184076|ENST00000330029|UQCR10;nc|ENSG00000184076|Q9UDW1-2|UQCR10 22.736283301280096 0.2418982879461534 2 [{I|L}T][KS]YS 6 3 40.959 0.0 0.0 3.9977 0.0 0.0 0.0 342.2057985003566 342.2057985003566 28.485221620214105 0.0 0.0 0.0 0 0.5 2.0 0.805462187404089 0.0 [{I|L}T][KS]YS 3.9977 - 119 1 1.995 72661.2 1.0 4754 3587 8336 DOHH2_400M_050219_2,8343 DOHH2_400M_050219_2,8343,TLTSKLYSL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8345 47.057 99.0 594210.0 25 0 34431.0 + 6191 DTEFPNFKY 9 77 580.7667641827818 1159.5189754323635 2 580.7667114138603 MULTI CID FTMS 0 0 0 8344 700147.0625 1.0 0 0.0 1 Unmodified _DTEFPNFKY_ ENSG00000132383|ENST00000254719|RPA1 58.6788170122104 0.0268135626297836 2 {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY 9 0 + 49.944 0.0 0.0 4.3073 4.3073 80.646 0.0 0.0 0.0 23.30075608481181 9.850680276396346 9.850680276396346 9.208187539523747 0 0.7614393726401688 0.0 0.4247425010840047 0.0 + + {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PGG{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}P[KP]D[DP];{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}VVC(Carbamidomethyl (C))KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}P[RH]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ES]|[DT]|[{I|L}C]}E[KP]PEE{[ES]|[DT]|[{I|L}C]};[NP]{M(Oxidation (M))|F}K{M(Oxidation (M))|F}[YE]{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}VV[CG]KY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EEPN{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.3073;3.5132;2.8254;2.6066;2.4548;2.1029;1.9487;1.8125;1.6672;1.6606 +;-;-;-;-;-;-;-;-;- + 273 + 1 1.995 48925.4 1.0 4755 3588 8344 DOHH2_400M_050219_2,8345 DOHH2_400M_050219_2,8345,DTEFPNFKY True True DTEFPNFKY 47.056792 580.76671141386 30518349.0 8344.0 ENSG00000132383|ENST00000254719|RPA1 9.378934542338053 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8346 47.069 682.0 116420.0 25 0 18082.0 + 38511 TSLIRESKEL 10 96 588.3353863294454 1174.6562197256908 2 588.3356201052666 MULTI CID FTMS 0 0 0 8344 105384.734375 0.4785946596778243 6 -0.3017997741699219 2 Unmodified _TSLIRESKEL_ REV__ENST00000397149.3_1_9:33057678-33060557:-|nuORF 5.296884461304476 0.7021353017287152 2 T 1 -1 1.9897 0.0 0.0 0.16939 0.0 0.0 791.4455396493221 279.1450289361938 1070.590568585516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.16939 + + 21 + 1 1.995 65409.2 1.0 4756 3588 8344 DOHH2_400M_050219_2,8346 DOHH2_400M_050219_2,8346,TSLIRESKEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8347 47.072 162.0 405490.0 25 0 35566.0 + 550 AEIEIVKEEF 10 87 603.816583087715 1205.61861324223 2 603.8162719607353 MULTI CID FTMS 0 0 0 8344 328911.8125 0.6050795236388643 -1 0.0862846374511718 3 Unmodified _AEIEIVKEEF_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2 55.23464941255904 0.0494277333541689 2 {[QN]|[E{I|L}]|[KN]}ATHV{I|L}E{I|L} 9 7 71.961 0.0 0.0 5.9688 0.0 0.0 0.0 197.0623137639674 197.0623137639674 35.95077630092079 0.0 0.0 0.0 0 0.8807196863200843 1.3010299956639813 1.1549471895720984 0.0 {[QN]|[E{I|L}]|[KN]}ATHV{I|L}E{I|L} 5.9688 - 1358 1 1.995 50804.7 1.0 4757 3588 8344 DOHH2_400M_050219_2,8347 DOHH2_400M_050219_2,8347,AEIEIVKEEF True True AEIEIVKEEF 47.071869 603.816271960735 9049256.25 8344.0 ENST00000557005.1_1_14:64469755-64489638:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 7.770119190216064 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8348 47.084 676.0 91120.0 25 0 4652.7 + + -1 VTDDSWLGNTTQY 13 104 750.3362287868839 1498.6579046405675 2 750.3351318240166 MULTI CID FTMS 0 0 0 8344 138270.484375 1.0 0 0.0 4 Carbamidomethyl (C) _DKQWC(Carbamidomethyl (C))DLMLQY_ nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1 8.745405648335112 0.8338865417133445 2 {[TV]|[{I|L}S]}DDADS{I|L} 8 -1 46.519 0.0 0.0 3.104 0.0 0.0 0.0 679.2731139513677 679.2731139513677 23.688134150875307 0.0 0.0 0.0 0 0.6237125054200234 1.3010299956639813 1.6203715150305282 0.0 {[TV]|[{I|L}S]}DDADS{I|L} 3.104 - 1720 1 1.995 50931.5 1.0 4758 3588 8344 DOHH2_400M_050219_2,8348 DOHH2_400M_050219_2,8348,DKQWCDLMLQY False False VTDDSWLGNTTQY 47.08365 750.335131824017 930193.75 8344.0 nc|ENSG00000131196|O95644-10|NFATC1;;nc|ENSG00000131196|O95644-5|NFATC1;;ENSG00000131196|ENST00000427363|NFATC1;;nc|ENSG00000131196|O95644-11|NFATC1;;nc|ENSG00000131196|O95644-8|NFATC1;;nc|ENSG00000131196|O95644-2|NFATC1;;nc|ENSG00000131196|O95644-6|NFATC1;;nc|ENSG00000131196|O95644-4|NFATC1;;nc|ENSG00000131196|O95644-3|NFATC1;;chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1 5.717083136240642 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8349 47.093 520.0 156600.0 25 0 14416.0 + 5177 DILSRIHTI 9 110 534.3141036843582 1066.6136544355163 2 534.3136474490166 MULTI CID FTMS 0 0 0 8344 107452.7890625 1.0 0 0.0 5 Unmodified _DILSRIHTI_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 59.36838082759317 0.0264317782606298 2 {I|L}D{I|L}R{I|L}SHT{I|L} 9 4 + 100.58 0.0 0.0 9.4295 9.4295 88.099 0.0 0.0 0.0 83.58648488285382 18.372505457509973 18.372505457509973 4.771212547196626 0 2.1549471895720984 2.0 1.548455006504028 0.0 {I|L}D{I|L}R{I|L}SHT{I|L};{I|L}D{I|L}RVTHT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}K{I|L}HT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}{I|L}KHT{I|L};{I|L}QQ{I|L}KSHT{I|L};{[TV]|[{I|L}S]}QQK{I|L}HT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VK{I|L}HT{I|L};{I|L}QQK{I|L}SHT{I|L};{[TV]|[{I|L}S]}QQ{I|L}KHT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V{I|L}KHT{I|L} 9.4295;8.9822;5.1105;4.8283;4.5407;4.4815;4.3182;4.2584;4.1993;4.036 -;-;-;-;-;-;-;-;-;- 646 + 1 1.995 68482.1 1.0 4759 3588 8344 DOHH2_400M_050219_2,8349 DOHH2_400M_050219_2,8349,DILSRIHTI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8350 47.107 800.0 95274.0 25 0 7736.0 + + -1 TTDFPSESSFEY 12 104 705.2906939268995 1408.566834920599 2 705.2900878787041 MULTI CID FTMS 0 0 0 8344 99349.71875 0.8109675819306412 -4 0.29888916015625 6 2 Oxidation (M) _ESFTTDPRM(Oxidation (M))YM(Oxidation (M))_ ENSG00000120280|ENST00000378962|TASL 20.41453444215458 0.6105011870913812 2 {M(Oxidation (M))|F}STE{M(Oxidation (M))|F}SSNY 9 -1 47.393 0.0 0.0 3.3646 0.0 0.0 328.1367334575114 0.0 328.1367334575114 0.0 25.3350377162234 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 {M(Oxidation (M))|F}STE{M(Oxidation (M))|F}SSNY 3.3646 - 4848 + 1 1.995 59937.1 0.4600000083446502 4760 3588 8344 DOHH2_400M_050219_2,8350 DOHH2_400M_050219_2,8350,ESFTTDPRMYM False False TTDFPSESSFEY 47.106644 705.290087878704 875255.6875 8344.0 ENSG00000120280|ENST00000378962|TASL 8.89067300160726 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8351 47.118 644.0 162490.0 25 0 10944.0 + 339 AEANHFIDL 9 124 515.2536677222487 1028.4927825112973 2 515.2540161013603 MULTI CID FTMS 0 0 0 8344 116215.109375 0.7340374905750502 -1 0.0862846374511718 7 Unmodified _AEANHFIDL_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 51.41523569358685 0.0372669606867193 2 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}D{I|L} 8 4 + 66.601 0.0 0.0 6.4756 6.4756 79.239 0.0 0.0 0.0 1.357580297878911 16.409780573583312 1.357580297878911 1.357580297878911 0 0.7742275032520141 1.3979400086720375 0.0 0.5774509799928715 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}D{I|L};[HN]A{M(Oxidation (M))|F}EA{I|L}D{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}NAEA{I|L}D{I|L};[HN]A{M(Oxidation (M))|F}{I|L}EAD{I|L};[HN]{M(Oxidation (M))|F}AEA{I|L}D{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}NA{I|L}EAD{I|L};[HN]A{M(Oxidation (M))|F}E{I|L}AD{I|L};[HN]{M(Oxidation (M))|F}A{I|L}EAD{I|L};{[CP]|[EA]}ANH{M(Oxidation (M))|F}{I|L}D{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}GGAEA{I|L}D{I|L} 6.4756;6.3436;5.9504;5.8724;5.7347;5.4792;5.3063;5.2635;5.153;5.0551 -;-;-;-;-;-;-;-;+;- + 1480 1 1.995 82319.8 1.0 4761 3588 8344 DOHH2_400M_050219_2,8351 DOHH2_400M_050219_2,8351,AEANHFIDL True True AEANHFIDL 47.117883 515.25401610136 1005692.1875 8344.0 nc|ENSG00000147162|O15294-3|OGT;;ENSG00000147162|ENST00000373719|OGT;;nc|ENSG00000147162|O15294-4|OGT;;nc|ENSG00000147162|O15294-2|OGT 6.369522253672282 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8353 47.134 800.0 80823.0 25 0 8436.6 + 183 AANPHSFVF 9 97 495.2458316263696 988.4771103195392 2 495.2453491091728 MULTI CID FTMS 0 0 0 8352 98456.875 0.0492916663850554 6 -0.3088836669921875 1 Unmodified _AANPHSFVF_ ENSG00000130810|ENST00000253107|PPAN;nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN 41.8396318013385 0.0653578398400075 2 AAN[HT]{[ET]|[MV]}V{M(Oxidation (M))|F} 9 3 + 34.159 0.0 0.0 3.4558 3.4558 75.517 0.0 0.0 0.0 6.746199743006052 15.462659351691531 6.746199743006052 7.781512503836431 0 0.3807196863200844 1.5228787452803376 0.5 0.0 AAN[HT]{[ET]|[MV]}V{M(Oxidation (M))|F};AAN[HA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{M(Oxidation (M))|F};[HS]PQQ{M(Oxidation (M))|F}V{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HPQQV{M(Oxidation (M))|F};[HS]{M(Oxidation (M))|F}PQQV{M(Oxidation (M))|F};QQ[HT]{[ET]|[MV]}V{M(Oxidation (M))|F};[HS]P{M(Oxidation (M))|F}QQV{M(Oxidation (M))|F};{[ET]|[MV]}[YT]{[ET]|[MV]}V{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HPVQQ{M(Oxidation (M))|F};QQ[HA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{M(Oxidation (M))|F} 3.4558;2.6685;2.5668;2.1629;2.0366;1.9669;1.8584;1.306;1.272;1.1796 -;-;-;-;-;-;-;-;-;- 393 1 1.995 53525.2 0.5299999713897705 4762 3589 8352 DOHH2_400M_050219_2,8353 DOHH2_400M_050219_2,8353,AANPHSFVF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8354 47.14 294.0 214450.0 25 0 9432.6 -1 0 85 881.4133537592872 1760.8121545853744 2 881.9147216677666 MULTI CID FTMS 0 0 0 8352 287541.875 0.611718134475555 -3 0.2031517028808593 2 2 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 12 -1 76.966 0.0 0.0 4.371 0.0 0.0 358.22929625687203 0.0 358.22929625687203 0.0 60.09881272697172 0.0 0.0 0 0.3054621874040891 0.0 0.0 1.610924374808178 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 4.371 - 2063 + 1 1.995 48920.6 1.0 4763 3589 8352 DOHH2_400M_050219_2,8354 DOHH2_400M_050219_2,8354, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8355 47.144 207.0 288250.0 25 0 20985.0 + 7166 EEPISLHTW 9 86 556.2750932938733 1110.5356336545465 2 556.2744628787041 MULTI CID FTMS 0 0 0 8352 258194.03125 0.8738353123337539 -2 0.1534042358398437 3 Unmodified _EEPISLHTW_ ENST00000318410.11_1_8:126096196-126103965:-|nuORF 74.42276476219924 0.019389277360085 2 EEP{I|L}S{I|L}HTW 9 0 + 70.187 0.0 0.0 6.3201 6.3201 90.888 0.0 0.0 0.0 14.094345217579471 14.094345217579471 14.094345217579471 14.094345217579471 0 0.3807196863200844 1.6989700043360187 1.774227503252014 0.0 + + EEP{I|L}S{I|L}HTW;EE[{I|L}A]{I|L}S{I|L}P[HC];[{I|L}P]S[H{I|L}][HA]P[HC];[{I|L}P]S[H{I|L}]TWEE;[H{I|L}]S[{I|L}P][HA]P[HC];[HT]V[{I|L}P][HA]P[HC];[HT]VTW{I|L}PEE;[H{I|L}]STW{I|L}PEE;[HT]VT{I|L}PWEE;[H{I|L}]ST{I|L}PWEE 6.3201;5.0509;2.972;2.223;1.7735;1.7735;1.6694;1.6694;1.3829;1.3829 +;-;-;-;-;-;-;-;-;- + 294 + 1 1.995 53310.9 1.0 4764 3589 8352 DOHH2_400M_050219_2,8355 DOHH2_400M_050219_2,8355,EEPISLHTW True True EEPISLHTW 47.14362 556.274462878704 4247580.0 8352.0 ENST00000318410.11_1_8:126096196-126103965:-|nuORF 6.600267887115479 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8356 47.151 389.0 231150.0 25 0 37901.0 + 178 AANKTIIYL 9 103 503.80006227896587 1005.5855716247318 2 503.8004333376884 MULTI CID FTMS 0 0 0 8352 190839.625 0.6208581325277626 -3 0.2031517028808593 4 Unmodified _AANKTIIYL_ ENSG00000112159|ENST00000369393|MDN1 68.08070601005525 0.0218408846571049 2 {[QN]|[E{I|L}]|[KN]}AAT{I|L}{I|L}Y{I|L} 9 4 + 67.292 0.0 0.0 6.6918 6.6918 87.461 0.0 0.0 0.0 13.605925060534574 42.13538040330974 13.605925060534574 8.02378753635658 0 0.5 1.0969100130080565 1.674742501084005 0.7742275032520141 {[QN]|[E{I|L}]|[KN]}AAT{I|L}{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}AA{I|L}T{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}AAT{I|L}Y{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}AA{I|L}TY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[RV]T{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}AATY{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}T]AA{I|L}Y{I|L};[{I|L}T][RD]{I|L}{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}[RV]TY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}T]{I|L}AAY{I|L} 6.6918;5.8939;5.8204;5.0224;4.8273;4.7993;4.2055;4.1868;3.9558;3.5814 -;-;-;-;-;-;-;-;-;- 378 1 1.995 72842.5 1.0 4765 3589 8352 DOHH2_400M_050219_2,8356 DOHH2_400M_050219_2,8356,AANKTIIYL True True AANKTIIYL 47.150581 503.800433337688 1799714.0 8352.0 ENSG00000112159|ENST00000369393|MDN1 3.624769369761149 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8357 47.162 662.0 161340.0 25 0 14847.0 + 14760 ILDEVIMGY 9 124 534.7676582980107 1067.5207636628213 2 534.7671996951103 MULTI CID FTMS 0 0 0 8352 106371.8203125 0.4572967887106115 -2 0.1534042358398437 5 Oxidation (M) _ILDEVIM(Oxidation (M))GY_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 63.562846038646086 0.0241094678104353 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}D{I|L}R{I|L} 7 6 60.956 0.0 0.0 5.7101 0.0 0.0 0.0 225.9954513138428 225.9954513138428 40.053431336667 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.5277586639249157 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}D{I|L}R{I|L} 5.7101 - 939 1 1.995 83302.2 1.0 4766 3589 8352 DOHH2_400M_050219_2,8357 DOHH2_400M_050219_2,8357,ILDEVIMGY True False ILDEVIMGY 47.162112 534.76719969511 2349407.5 8352.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 6.689993381500244 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8358 47.176 795.0 74545.0 25 0 11756.0 31403 RPFAQVLL 8 88 472.2884274497442 942.5623019662884 2 472.2881042361259 MULTI CID FTMS 0 0 0 8352 99005.2109375 0.0916912094637944 8 -0.4843635559082031 6 Unmodified _RPFAQVLL_ ENST00000491430.1_1_1:234743015-234743087:-|nuORF 2.302733041254933 0.8103549651115762 2 {I|L} 1 7 8.8735 0.0 0.0 0.94142 0.0 0.0 811.4672529934353 0.0 811.4672529934353 0.0 8.873453591370684 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.94142 + + 6 + 1 1.995 51611.6 1.0 4767 3589 8352 DOHH2_400M_050219_2,8358 DOHH2_400M_050219_2,8358,RPFAQVLL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8359 47.19 800.0 142600.0 25 0 22824.0 + 45285 YSDLHAFYY 9 136 589.7617014309147 1177.5088499286294 2 589.7611572146416 MULTI CID FTMS 0 0 0 8352 100429.8671875 1.0 0 0.0 7 Unmodified _YSDLHAFYY_ ENSG00000185090|ENST00000373045|MANEAL;nc|ENSG00000185090|Q5VSG8-3|MANEAL 52.268347100219714 0.0353964759249114 2 YS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}A[RD]Y 9 5 + 57.801 0.0 0.0 4.9087 4.9087 79.474 0.0 0.0 0.0 23.543483413195503 6.465912507003608 6.465912507003608 6.465912507003608 0 0.75 1.5228787452803376 0.6989700043360187 0.0 YS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}A[RD]Y;YS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}SD[R{M(Oxidation (M))|F}];YS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[RD]Y;[H{I|L}]DASY{M(Oxidation (M))|F}YY;[H{I|L}]DAS{M(Oxidation (M))|F}YYY;[H{I|L}]DSAY{M(Oxidation (M))|F}YY;[H{I|L}]DSA{M(Oxidation (M))|F}YYY;YS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}];[H{I|L}]ADSY{M(Oxidation (M))|F}YY;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}ASY{M(Oxidation (M))|F}YY 4.9087;4.3596;4.1645;4.1571;4.1343;3.9014;3.8787;3.8483;3.8191;3.8087 -;-;-;-;-;-;-;-;-;- 726 + 1 1.995 87935.8 0.449999988079071 4768 3589 8352 DOHH2_400M_050219_2,8359 DOHH2_400M_050219_2,8359,YSDLHAFYY True True YSDLHAFYY 47.189676 589.761157214642 678019.3125 8352.0 ENSG00000185090|ENST00000373045|MANEAL;;nc|ENSG00000185090|Q5VSG8-3|MANEAL 7.614086310068767 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8360 47.204 800.0 50231.0 25 0 2965.8 -1 0 71 981.801277542479 2942.382003227637 3 982.469287097454 MULTI CID FTMS 0 0 0 8352 89751.21875 0.3347300820823471 3 -0.1506500244140625 8 2 [NP]{I|L} 3 -1 7.4473 0.0 0.0 0.2531 0.0 0.0 0.0 2615.180623182968 2615.180623182968 2.8431811792050627 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L} 0.2531 - 32 1 1.995 35795.8 0.4199999868869781 4769 3589 8352 DOHH2_400M_050219_2,8360 DOHH2_400M_050219_2,8360, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8361 47.219 800.0 67016.0 25 0 16115.0 + 19282 LEKQVILQPMK 11 75 663.8960485031448 1325.7775440730895 2 663.8951293826103 MULTI CID FTMS 0 0 0 8352 86715.03125 0.7590951362073406 -2 0.1534042358398437 9 Unmodified _LEKQVILQPMK_ REV__ENSG00000099715|ENST00000698851|PCDH11Y;REV__ENSG00000102290|ENST00000682573|PCDH11X;REV__ENST00000361724.3_1_X:91090458-91134302:+|nuORF;REV__nc|ENSG00000099715|Q9BZA8-2|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8-4|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8|PCDH11Y;REV__nc|ENSG00000102290|Q9BZA7-2|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-3|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-4|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-6|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-8|PCDH11X 2.735195868890462 0.8622431031272658 2 Y 1 -1 11.42 0.0 0.0 0.86138 0.0 0.0 1144.7035064527754 0.0 1144.7035064527754 0.0 9.430283238465815 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.86138 - 20 + 1 1.995 51251.3 0.4300000071525574 4770 3589 8352 DOHH2_400M_050219_2,8361 DOHH2_400M_050219_2,8361,LEKQVILQPMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8362 47.231 686.0 112600.0 25 0 8035.6 + 32790 SEELRNLGW 9 129 552.2774556556699 0 552.2774536013603 PEAK CID FTMS 0 0 0 8352 84124.09375 1.0 0 0.0 10 Unmodified _SEELRNLGW_ ENSG00000181555|ENST00000409792|SETD2;nc|ENSG00000181555|Q9BYW2-2|SETD2;nc|ENSG00000181555|Q9BYW2-3|SETD2 63.960520009940105 0.0127941097601138 2 G{I|L}Y{I|L}TCY 7 8 47.912 0.0 0.0 4.3456 0.0 0.0 204.08794282690104 82.06688104801015 286.1548238749112 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 1.392159058960253 0.0 G{I|L}Y{I|L}TCY 4.3456 - 245 + 1 1.995 60125.6 1.0 4771 3589 8352 DOHH2_400M_050219_2,8362 DOHH2_400M_050219_2,8362,SEELRNLGW True True SEELRNLGW 47.230741 552.27745360136 461042.875 8352.0 nc|ENSG00000181555|Q9BYW2-2|SETD2;;ENSG00000181555|ENST00000409792|SETD2;;nc|ENSG00000181555|Q9BYW2-3|SETD2 6.899011452992757 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8363 47.238 347.0 237160.0 25 0 26035.0 + 43259 WEQGFSQSF 9 111 558.2433899514787 1114.4722269697572 2 558.2435790896416 MULTI CID FTMS 0 0 0 8352 144361.109375 0.4107870156048283 -2 0.1534042358398437 11 Unmodified _WEQGFSQSF_ ENSG00000168036|ENST00000349496|CTNNB1 43.85829265575387 0.0542763391141878 2 [WE]QG{M(Oxidation (M))|F} 5 4 43.372 0.0 0.0 3.8917 0.0 0.0 0.0 464.17646217601686 464.17646217601686 10.491275634974713 0.0 0.0 0.0 0 0.0 1.154901959985743 0.3494850021680094 0.6109243748081782 + [WE]QG{M(Oxidation (M))|F} 3.8917 + + 1503 1 1.995 64396.1 1.0 4772 3589 8352 DOHH2_400M_050219_2,8363 DOHH2_400M_050219_2,8363,WEQGFSQSF True True WEQGFSQSF 47.238201 558.243579089642 1980096.5 8352.0 ENSG00000168036|ENST00000349496|CTNNB1 6.54321829477946 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8365 47.244 83.0 1236200.0 25 0 114470.0 + 734 AEQDFISKF 9 112 542.7692183972135 1083.523883861227 2 542.7692748904228 MULTI CID FTMS 0 0 0 8364 678801.6875 0.463544014975685 1 -0.0262680053710937 1 Unmodified _AEQDFISKF_ ENSG00000090989|ENST00000381295|EXOC1;ENST00000504321.1_1_4:56755058-56759725:+|nuORF;ENST00000511971.5_1_4:56749994-56766742:+|nuORF;nc|ENSG00000090989|Q9NV70-2|EXOC1 59.05245873256422 0.0266066919017776 2 {[CP]|[EA]}QD{M(Oxidation (M))|F}{I|L}SK{M(Oxidation (M))|F} 9 0 {[CP]|[EA]} + + 75.543 2.8432 1.421 6.972 6.972 62.483 0.0 0.0 0.0 0.0 47.94124931625144 0.0 0.0 0 2.0356668758921828 0.0 0.7887254899964358 0.6989700043360187 + + {[CP]|[EA]}QD{M(Oxidation (M))|F}{I|L}SK{M(Oxidation (M))|F} 6.972 + + 835 + 1 1.995 79999.8 1.0 4773 3590 8364 DOHH2_400M_050219_2,8365 DOHH2_400M_050219_2,8365,AEQDFISKF True True AEQDFISKF 47.243963 542.769274890423 9176087.0 8364.0 nc|ENSG00000090989|Q9NV70-2|EXOC1;;ENST00000511971.5_1_4:56749994-56766742:+|nuORF;;ENST00000504321.1_1_4:56755058-56759725:+|nuORF;;ENSG00000090989|ENST00000381295|EXOC1 8.359717528025309 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8366 47.251 369.0 456030.0 25 0 82635.0 + 24162 LYRVKVNRSS 10 105 611.3563670908326 1220.698181248465 2 611.3561279177666 MULTI CID FTMS 0 0 0 8364 154808.59375 0.1554604101007254 3 -0.0988273620605468 2 Unmodified _LYRVKVNRSS_ REV__ENST00000487196.1_1_10:5800911-5803598:+|nuORF 1.4819007175156935 0.719781833666733 2 W 1 -1 10.278 0.0 0.0 0.84194 0.0 0.0 1016.6086254396744 0.0 1016.6086254396744 0.0 0.3627533357430579 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.84194 - 9 + 1 1.995 127477.3 1.0 4774 3590 8364 DOHH2_400M_050219_2,8366 DOHH2_400M_050219_2,8366,LYRVKVNRSS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8367 47.264 800.0 306010.0 25 0 64077.0 + 37247 TIMPKDIQL 9 137 529.7992520418954 1057.5839511505908 2 529.7994262576103 MULTI CID FTMS 0 0 0 8364 114109.8125 0.0675701772306307 -4 0.3234634399414062 3 Unmodified _TIMPKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 96.11092074494114 0.0124975504059861 2 [{I|L}T][YV]QPPQ{I|L} 9 5 + 57.954 0.0 0.0 5.4798 5.4798 81.254 0.0 0.0 0.0 15.447654210078966 6.751284189090825 6.751284189090825 6.103955202775225 0 0.805462187404089 2.0 0.0 1.1237125054200234 [{I|L}T][YV]QPPQ{I|L};[{I|L}T]AAPQM{I|L}T{I|L};[{I|L}T]AAPMQ{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[WK]RM[VP];[{I|L}T][WR]RM[VP];[{I|L}T][YV]PQPQ{I|L};[{I|L}T][YV][AG]PPQ{I|L};[{I|L}T]AAPMT{I|L}Q{I|L};[{I|L}T]{[QN]|[E{I|L}]|[KN]}[WR]Q{I|L};[{I|L}T][YV]QPP[AG]{I|L} 5.4798;4.9027;4.8569;4.7556;4.7075;4.6807;4.6091;4.5264;4.3461;4.2787 -;-;-;-;-;-;-;-;-;- 2174 + 1 1.995 188752.2 0.4000000059604645 4775 3590 8364 DOHH2_400M_050219_2,8367 DOHH2_400M_050219_2,8367,TIMPKDIQL True True TIMPKDIQL 47.264464 529.79942625761 9450695.0 8364.0 ENSG00000278828|ENST00000685041|H3C10;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000197409|ENST00000356476|H3C4;;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000188375|ENST00000340398|H3-5;;ENSG00000277775|ENST00000618052|H3C7;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;;ENSG00000275379|ENST00000616365|H3C11;;ENSG00000163041|ENST00000366815|H3-3A 2.0097581148147583 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8370 47.273 31.0 1645500.0 25 0 160010.0 + 33023 SEPDFVAKF 9 65 520.2583260448015 1038.502099156403 2 520.2585937380791 MULTI CID FTMS 0 0 0 8369 1801495.875 1.0 0 0.0 1 Unmodified _SEPDFVAKF_ ENSG00000179933|ENST00000319074|C14orf119 34.40172386719151 0.1061884637610825 2 {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F} 9 0 + 48.312 0.0 0.0 4.6521 4.6521 86.683 0.0 0.0 0.0 15.59562510389476 9.208187539523747 9.208187539523747 30.41956270212445 0 0.4247425010840047 0.0 0.0 0.3252574989159953 + + {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}PD[RH][W{I|L}];{[ES]|[DT]|[{I|L}C]}P[VP]V[HQ]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}[RH]V[HQ]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}P[VP][DP][W{I|L}];{[ES]|[DT]|[{I|L}C]}[RH][DP][W{I|L}] 4.6521;1.7229;1.5974;0.97362;0.83105;0.20725 +;-;-;-;-;- + 236 + 1 1.995 45547.0 1.0 4776 3592 8369 DOHH2_400M_050219_2,8370 DOHH2_400M_050219_2,8370,SEPDFVAKF True True SEPDFVAKF 47.273332 520.258593738079 37851384.0 8369.0 ENSG00000179933|ENST00000319074|C14orf119 8.452662309010824 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8371 47.277 206.0 233320.0 25 0 56422.0 + 43429 WRRRLVHMR 9 66 655.3825762091127 1308.7505994850253 2 655.3823730349541 MULTI CID FTMS 0 0 0 8369 302215.4375 0.98781332850674 1 -0.0684890747070312 2 Unmodified _WRRRLVHMR_ REV__ENSG00000171004|ENST00000370833|HS6ST2;REV__nc|ENSG00000171004|Q96MM7|HS6ST2 0.5247636613948944 0.8963649302248013 2 G 1 -1 2.4743 0.0 0.0 0.18905 0.0 0.0 729.5344262445941 519.1720064752561 1248.7064327198502 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.18905 - 2 + 1 1.995 52939.2 1.0 4777 3592 8369 DOHH2_400M_050219_2,8371 DOHH2_400M_050219_2,8371,WRRRLVHMR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8372 47.282 233.0 263400.0 25 0 19630.0 + 18053 KTDHFIFTY 9 88 586.2929351504159 1170.5713173676318 2 586.2925903201103 MULTI CID FTMS 0 0 0 8369 241937.828125 0.663760923276303 -1 0.0040702819824218 3 Unmodified _KTDHFIFTY_ ENSG00000116212|ENST00000371370|LRRC42 60.07390631473393 0.0260411565414776 2 [YE][HA]K{I|L}{M(Oxidation (M))|F}TY 9 4 + 72.009 0.0 0.0 6.1516 6.1516 82.592 0.0 0.0 0.0 4.850901843909384 12.40270483492408 4.850901843909384 4.850901843909384 0 1.3494850021680094 1.3979400086720375 1.055462187404089 0.2887254899964357 [YE][HA]K{I|L}{M(Oxidation (M))|F}TY;[HD]TK{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}TY;[HD]{M(Oxidation (M))|F}TK{I|L}{M(Oxidation (M))|F}TY;[HD]T{M(Oxidation (M))|F}K{I|L}{M(Oxidation (M))|F}TY;[YE][HA]{I|L}K{M(Oxidation (M))|F}TY;[YE][HA]K{M(Oxidation (M))|F}{I|L}TY;[YE][HA]K{I|L}T{M(Oxidation (M))|F}Y;[{M(Oxidation (M))|F}T][HD]K{I|L}{M(Oxidation (M))|F}TY;[QA]ETRR{M(Oxidation (M))|F}TY;[QA]EEKR{M(Oxidation (M))|F}TY 6.1516;5.7372;5.48;5.48;5.3868;5.318;5.3168;5.2145;5.092;4.9841 -;-;-;-;-;-;-;-;-;- 853 1 1.995 51750.9 1.0 4778 3592 8369 DOHH2_400M_050219_2,8372 DOHH2_400M_050219_2,8372,KTDHFIFTY True True KTDHFIFTY 47.281651 586.29259032011 1785431.375 8369.0 ENSG00000116212|ENST00000371370|LRRC42 7.689493179321289 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8373 47.284 132.0 273920.0 25 0 28988.0 + 2554 ASETGFLTY 9 69 494.7348217639697 987.4550905947392 2 494.7349120974541 MULTI CID FTMS 0 0 0 8369 193649.984375 0.3046969045392113 -2 0.0303382873535156 4 Unmodified _ASETGFLTY_ ENSG00000227057|ENST00000374617|WDR46;ENST00000489905.1_1_6:33248421-33255161:-|nuORF 16.942295170755138 0.3780752226737986 2 {[SA]|[TG]}{[ET]|[MV]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}TY 9 0 {[SA]|[TG]}{[ET]|[MV]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L} + + 24.464 -2.0796 -0.29484 2.4775 2.4775 48.019 0.0 0.0 0.0 0.0 7.016675202793717 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + + {[SA]|[TG]}{[ET]|[MV]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}TY 2.4775 + + 65 + 1 1.995 32137.9 1.0 4779 3592 8369 DOHH2_400M_050219_2,8373 DOHH2_400M_050219_2,8373,ASETGFLTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8374 47.293 489.0 202640.0 25 0 21629.0 + 36832 TELERAFGYY 10 89 624.7983299061758 1247.5821068791515 2 624.7984496951103 MULTI CID FTMS 0 0 0 8369 137972.125 0.6790913503182 -2 0.0303382873535156 5 Unmodified _TELERAFGYY_ ENSG00000112081|ENST00000373715|SRSF3;nc|ENSG00000112081|P84103-2|SRSF3 49.74193281347159 0.0816655385645911 2 TE{I|L}E{M(Oxidation (M))|F}[RK]YY 9 4 + 75.187 0.0 0.0 6.0267 6.0267 80.464 0.0 0.0 0.0 22.54071093579208 3.451450164297384 3.451450164297384 3.451450164297384 0 1.2614393726401687 1.6989700043360187 0.0 0.0 TE{I|L}E{M(Oxidation (M))|F}[RK]YY;TENG{M(Oxidation (M))|F}ARE{I|L}[DP];TENG{M(Oxidation (M))|F}ARKN[DP];TEGGG{M(Oxidation (M))|F}ARE{I|L}[DP];TENK{M(Oxidation (M))|F}{[RE]|[WV]}{I|L}[DP];TEGGG{M(Oxidation (M))|F}ARKN[DP];TENG{M(Oxidation (M))|F}ARKGG[DP];TE{I|L}E{M(Oxidation (M))|F}[RK]N[DP];TENG{M(Oxidation (M))|F}A[HS][{I|L}A]{[DS]|[MA]|[CV]|TT};TEGGK{M(Oxidation (M))|F}{[RE]|[WV]}{I|L}[DP] 6.0267;5.75;5.3912;5.0183;4.9678;4.6595;4.6595;4.5371;4.3723;4.2332 -;-;-;-;-;-;-;-;-;- 591 + 1 1.995 76676.2 1.0 4780 3592 8369 DOHH2_400M_050219_2,8374 DOHH2_400M_050219_2,8374,TELERAFGYY True True TELERAFGYY 47.292982 624.79844969511 1100541.375 8369.0 nc|ENSG00000112081|P84103-2|SRSF3;;ENSG00000112081|ENST00000373715|SRSF3 8.565832138061523 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8375 47.306 722.0 125230.0 25 0 25767.0 + + 3491 RTELPQFVSY 10 90 619.8691266110251 0 619.8693115115166 PEAK CID FTMS 0 0 0 8369 130812.421875 0.87469258538784 -2 0.0303382873535156 6 Unmodified _CKKFINLIFL_ ENSG00000100304|ENST00000216129|TTLL12 1.4819007175156935 0.3961065659209837 2 V{M(Oxidation (M))|F} 2 -1 7.9588 0.0 0.0 0.64302 0.0 0.0 267.2000929663876 721.3651827447874 988.565275711175 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{M(Oxidation (M))|F} 0.64302 - 14 + 1 1.995 71720.1 1.0 4781 3592 8369 DOHH2_400M_050219_2,8375 DOHH2_400M_050219_2,8375,CKKFINLIFL False False RTELPQFVSY 47.305511 619.869311511517 292178.4375 8369.0 ENSG00000100304|ENST00000216129|TTLL12 3.2246740659077964 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8376 47.314 496.0 158080.0 25 0 20312.0 + 16659 KELKELDTR 9 88 566.3218553495147 0 566.3221313357353 PEAK CID FTMS 0 0 0 8369 132577.9375 0.7459295354491975 1 -0.0684890747070312 7 Unmodified _KELKELDTR_ REV__ENSG00000108839|ENST00000251535|ALOX12 3.5964929083625545 0.3444685223463734 2 S 1 -1 1.2591 0.0 0.0 0.11136 0.0 0.0 565.3595787636795 475.2196138971313 1040.5791926608108 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.11136 - 2 + 1 1.995 63378.5 1.0 4782 3592 8369 DOHH2_400M_050219_2,8376 DOHH2_400M_050219_2,8376,KELKELDTR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8377 47.324 553.0 112240.0 25 0 10739.0 + 32957 SELPGNPNAVW 11 110 592.2909703945425 1182.5673878558848 2 592.2892333865166 MULTI CID FTMS 0 0 0 8369 120961.484375 0.4529873625201419 3 -0.158233642578125 8 Unmodified _SELPGNPNAVW_ ENSG00000189091|ENST00000302516|SF3B3 20.41453444215458 0.6105011870913812 2 VA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W 5 10 22.492 0.0 0.0 1.9019 0.0 0.0 533.2470276037349 0.0 533.2470276037349 0.0 8.490372752635391 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 VA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W 1.9019 - 273 + 1 1.995 49629.5 1.0 4783 3592 8369 DOHH2_400M_050219_2,8377 DOHH2_400M_050219_2,8377,SELPGNPNAVW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8378 47.337 752.0 209950.0 25 0 21396.0 + 31643 RRFTEIYEF 9 98 630.822405188728 1259.630257444256 2 630.8213378787041 MULTI CID FTMS 0 0 0 8369 98185.0625 0.0215252576052226 16 -0.9406013488769532 9 Unmodified _RRFTEIYEF_ chr7:74777347-74778307|47|25.45|0.54|5.56|+|0|NCF1,NCF1|1;chr7:74777347-74782939|29|11.28|0.14|6.32|+|0|NCF1,NCF1|1;chr7:75163019-75168632|32|13.03|0.19|6.12|-|0|NCF1C,NCF1C|1;ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74188378-74193456:+|nuORF;ENST00000449343.6_1_7:74188378-74197664:+|nuORF;nc|ENSG00000158517|P14598-2|NCF1;nc|ENSG00000165178|A8MVU1|NCF1C;nc|ENSG00000290838|A6NI72|NCF1B 29.081581746732265 0.1611639662936252 2 AN[EP]Y{M(Oxidation (M))|F}E 7 7 33.276 0.0 0.0 2.6417 0.0 0.0 391.2876148908219 0.0 391.2876148908219 0.0 15.176835373740758 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.8807196863200843 AN[EP]Y{M(Oxidation (M))|F}E 2.6417 - 114 1 1.995 117039.1 1.0 4784 3592 8369 DOHH2_400M_050219_2,8378 DOHH2_400M_050219_2,8378,RRFTEIYEF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8380 47.343 118.0 488000.0 25 0 27932.0 + 6192 DTEFPNFKY 9 93 580.7667641827818 1159.5189754323635 2 580.7666503787041 MULTI CID FTMS 0 0 0 8379 504687.40625 0.7208305701489678 5 -0.3354606628417969 1 Unmodified _DTEFPNFKY_ ENSG00000132383|ENST00000254719|RPA1 49.93300154707207 0.0405168250806675 2 {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY 9 0 + 42.374 0.0 0.0 3.6544 3.6544 78.588 0.0 0.0 0.0 18.728721920568244 11.170912423450403 11.170912423450403 9.208187539523747 0 0.7302046884880937 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PN{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}PGG{M(Oxidation (M))|F}KY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}Y[QT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}Y[KQ]{[ET]|[MV]};{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}VVC(Carbamidomethyl (C))KY;{[ES]|[DT]|[{I|L}C]}[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}KP{[QD]|[EN]|[WG]|[KD]|[RS]};{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}VV[CG]KY;{[ES]|[DT]|[{I|L}C]}[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ES]|[DT]|[{I|L}C]}[Y{M(Oxidation (M))|F}]K{M(Oxidation (M))|F}P{[QD]|[EN]|[WG]|[KD]|[RS]};{[ES]|[DT]|[{I|L}C]}[Y{M(Oxidation (M))|F}]E[QT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.6544;2.8603;2.6446;2.3619;2.2392;1.6744;1.4451;1.3053;0.70525;0.69914 +;-;-;-;-;-;-;-;-;- + 309 + 1 1.995 47146.8 1.0 4785 3593 8379 DOHH2_400M_050219_2,8380 DOHH2_400M_050219_2,8380,DTEFPNFKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8381 47.353 522.0 119260.0 25 0 9163.2 + 551 AEIEIVKEEF 10 87 603.816583087715 1205.61861324223 2 603.8162719607353 MULTI CID FTMS 0 0 0 8379 111689.2578125 0.2054680931009913 4 -0.2652244567871094 2 Unmodified _AEIEIVKEEF_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2 34.93206674587334 0.2110832994570416 2 {[QN]|[E{I|L}]|[KN]}ATHV{I|L}E 8 7 55.399 0.0 0.0 4.5951 0.0 0.0 0.0 310.1415059246553 310.1415059246553 36.89387834276005 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 1.079689690656103 0.0 {[QN]|[E{I|L}]|[KN]}ATHV{I|L}E 4.5951 - 556 1 1.995 50059.0 1.0 4786 3593 8379 DOHH2_400M_050219_2,8381 DOHH2_400M_050219_2,8381,AEIEIVKEEF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8383 47.359 200.0 244700.0 25 0 49628.0 7664 EKKKTYIMKP 10 73 633.3694777048854 1264.7244024765707 2 633.3694335818291 MULTI CID FTMS 0 0 0 8382 295057.6875 0.3088523458899135 -4 0.1143684387207031 1 Unmodified _EKKKTYIMKP_ ENST00000272793.9_1_2:170938445-170938493:+|nuORF 3.2813086475875832 0.7114585191678878 2 W 1 10 3.0989 0.0 0.0 0.24503 0.0 0.0 668.3554709034981 407.2791842096313 1075.6346551131294 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.24503 - 5 + 1 1.995 41447.6 1.0 4787 3594 8382 DOHH2_400M_050219_2,8383 DOHH2_400M_050219_2,8383,EKKKTYIMKP False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8384 47.373 800.0 123070.0 25 0 17847.0 + + 28758 YLDSIPPGQYM 11 112 641.8827421380392 1281.7509313428784 2 641.8824951052666 MULTI CID FTMS 0 0 0 8382 104007.4609375 0.3318335509505432 -3 0.0881004333496093 2 Unmodified _PWIVKLKGREG_ ENST00000475504.6_1_10:62539923-62545554:+|nuORF;nc|ENSG00000170312|P06493-2|CDK1;ENSG00000170312|ENST00000395284|CDK1 3.876331618118854 0.8568591502966533 2 [Y{I|L}]DS 4 -1 21.031 0.0 0.0 1.6408 0.0 0.0 0.0 800.5220244427409 800.5220244427409 9.560020049002578 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.5 0.0 [Y{I|L}]DS 1.6408 - 101 1 1.995 79511.5 0.4699999988079071 4788 3594 8382 DOHH2_400M_050219_2,8384 DOHH2_400M_050219_2,8384,PWIVKLKGREG False False YLDSIPPGQYM 47.372792 641.882495105267 2817730.25 8382.0 ENST00000475504.6_1_10:62539923-62545554:+|nuORF;;nc|ENSG00000170312|P06493-2|CDK1;;ENSG00000170312|ENST00000395284|CDK1 6.3669540087382 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8385 47.384 648.0 151600.0 25 0 13411.0 39757 VELMGREL 8 112 473.75323229536 945.49191165752 2 473.7531921267509 MULTI CID FTMS 0 0 0 8382 135584.828125 0.3870146566805141 -1 0.0155410766601562 3 Unmodified _VELMGREL_ ENSG00000115159|ENST00000438166|GPD2;ENST00000464846.5_1_2:157427687-157435520:+|nuORF;nc|ENSG00000115159|P43304-2|GPD2 57.47134341890925 0.1146309765603773 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}MNVE 7 3 42.087 0.0 0.0 4.4513 0.0 0.0 0.0 128.07209192447502 128.07209192447502 17.28885231997808 0.0 0.0 0.0 0 0.6822333069283655 2.0 1.555462187404089 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}MNVE 4.4513 - 304 + 1 1.995 80342.9 1.0 4789 3594 8382 DOHH2_400M_050219_2,8385 DOHH2_400M_050219_2,8385,VELMGREL True False EVGPRFEL 47.384065 473.753192126751 2108673.0 8382.0 ENST00000460766.5_1_2:131100637-131104038:+|nuORF;;ENSG00000136718|ENST00000259239|IMP4;;ENST00000475074.1_1_2:131103527-131104038:+|nuORF 4.460371494293213 2.0 False 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8386 47.389 267.0 235450.0 25 0 29939.0 + 16410 YIVDHTIIM 9 107 552.82515321846 1103.6357535037198 2 552.8243286013603 MULTI CID FTMS 0 0 0 8382 119115.578125 0.3567917336835136 -2 0.0840301513671875 4 Unmodified _IYRRRPMI_ ENSG00000133028|ENST00000255390|SCO1 26.34127834903884 0.4900704351052977 2 [Y{I|L}][RD]Q{I|L}A{I|L}{I|L} 9 5 + 41.242 0.0 0.0 3.7369 3.7369 68.976 0.0 0.0 0.0 2.033508659441132 10.449624067838318 2.033508659441132 1.249387366082999 0 0.2887254899964357 2.0 0.3494850021680094 0.0 [Y{I|L}][RD]Q{I|L}A{I|L}{I|L};[Y{I|L}][RD]{I|L}QA{I|L}{I|L};{I|L}G[RV]{I|L}[W{M(Oxidation (M))|F}]T{I|L};{I|L}G[RV]{I|L}{I|L}[RD]Y;[Y{I|L}][RD]Q{I|L}{I|L}A{I|L};[Y{I|L}][RD]{I|L}Q{I|L}A{I|L};[Y{I|L}][RD][AG]{I|L}A{I|L}{I|L};{I|L}G[RV]{I|L}[R{M(Oxidation (M))|F}]M{I|L};[Y{I|L}][RD]{I|L}[AG]A{I|L}{I|L};[{I|L}A]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}Q{I|L}A{I|L}{I|L} 3.7369;3.6237;3.5527;3.1942;3.0816;2.9684;2.9026;2.8211;2.7894;2.7378 -;-;-;-;-;-;-;-;-;- 860 1 1.995 50524.6 1.0 4790 3594 8382 DOHH2_400M_050219_2,8386 DOHH2_400M_050219_2,8386,IYRRRPMI False False YIVDHTIIM 47.389015 552.82432860136 589803.25 8382.0 ENSG00000133028|ENST00000255390|SCO1 3.545029799143473 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8387 47.403 800.0 104440.0 25 0 18228.0 + 32474 SAIPHPLIM 9 99 489.7758045261015 977.537056119003 2 489.7756530642509 MULTI CID FTMS 0 0 0 8382 105381.09375 1.0 0 0.0 5 Unmodified _SAIPHPLIM_ ENSG00000166200|ENST00000388901|COPS2;ENST00000559016.1_1_15:49426483-49429634:-|nuORF;nc|ENSG00000166200|P61201-2|COPS2 50.855029805455786 0.0384952370514206 2 [{I|L}P]HP{I|L}{[SA]|[TG]}{I|L}M 9 4 + 44.548 0.0 0.0 4.5572 4.5572 79.135 0.0 0.0 0.0 7.716525140920602 10.360527937172606 7.716525140920602 7.716525140920602 0 0.4247425010840047 1.3979400086720375 0.0 0.0 [{I|L}P]HP{I|L}{[SA]|[TG]}{I|L}M;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P{I|L}{[SA]|[TG]}{I|L}M;[{I|L}P][YV]HP[RP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}{I|L}{[SA]|[TG]}{I|L}M;[{I|L}P]H{[SA]|[TG]}[{I|L}P]{I|L}M;[{I|L}P]H[YV]P[RP];[{I|L}P]HP[YV][RP];[YV][{I|L}P]HP[RP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[YV]P[RP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[SA]|[TG]}[{I|L}P]{I|L}M 4.5572;3.7678;3.3942;3.1271;2.9236;2.6503;2.4702;2.3986;2.2954;2.1342 -;-;-;-;-;-;-;-;-;- 221 1 1.995 68147.4 0.4300000071525574 4791 3594 8382 DOHH2_400M_050219_2,8387 DOHH2_400M_050219_2,8387,SAIPHPLIM True True SAIPHPLIM 47.402831 489.775653064251 677371.5625 8382.0 ENST00000559016.1_1_15:49426483-49429634:-|nuORF;;nc|ENSG00000166200|P61201-2|COPS2;;ENSG00000166200|ENST00000388901|COPS2 6.024104595184326 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8388 47.417 800.0 110980.0 25 0 15121.0 + 9628 FLLWSGVGLL 10 131 368.8854390552115 1103.6344877658346 3 368.8853332400322 MULTI CID FTMS 0 0 0 8382 107036.546875 0.9409010817835388 -1 0.0155410766601562 6 Unmodified _FLLWSGVGLL_ REV__nc|ENSG00000167920|Q8N816-2|KRT10-AS1;REV__nc|ENSG00000167920|Q8N816|KRT10-AS1 19.256988751693697 0.5244284437930726 2 [VP][TA][KS]{M(Oxidation (M))|F}E{I|L}{I|L} 10 -1 [VP][TA][KS]{M(Oxidation (M))|F}E{I|L} + + 15.485 -4.8328 -0.49693 1.4031 1.4031 47.012 0.0 0.0 0.0 0.0 -10.177287669604311 -10.177287669604311 0.0 0 0.0 0.0 0.0 0.0 [VP][TA][KS]{M(Oxidation (M))|F}E{I|L}{I|L} 1.4031 - 65 + 1 1.995 73797.8 0.8199999928474426 4792 3594 8382 DOHH2_400M_050219_2,8388 DOHH2_400M_050219_2,8388,FLLWSGVGLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8389 47.427 578.0 147540.0 25 0 8753.8 + 11207 GENSGIGKLF 10 118 511.2691634237231 1020.523773914246 2 511.2690612673759 MULTI CID FTMS 0 0 0 8382 92079.0390625 0.4218113831110202 -1 0.0155410766601562 7 Unmodified _GENSGIGKLF_ ENSG00000129534|ENST00000310806|MIS18BP1 74.19965305603844 0.0188013450058842 2 {[DA]|[EG]}NSG{I|L}GK{I|L}{M(Oxidation (M))|F} 10 0 + 91.974 0.0 0.0 9.0124 9.0124 92.664 0.0 0.0 0.0 34.01741229020267 16.53212513775344 16.53212513775344 9.164539485499262 0 1.4802046884880935 1.5228787452803376 0.3807196863200844 0.0 + + {[DA]|[EG]}NSG{I|L}GK{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}GGSG{I|L}GK{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}NS{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}NSG{I|L}GK{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}GGS{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}GGSG{I|L}GK{M(Oxidation (M))|F}{I|L};WEE{I|L}GK{I|L}{M(Oxidation (M))|F};WN[WK]K{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}NS{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}{I|L};WGG[WK]K{I|L}{M(Oxidation (M))|F} 9.0124;8.1144;7.125;7.1199;6.2227;6.2219;5.6273;5.2942;5.2324;4.3799 +;-;-;-;-;-;-;-;-;- + 658 + 1 1.995 71522.4 1.0 4793 3594 8382 DOHH2_400M_050219_2,8389 DOHH2_400M_050219_2,8389,GENSGIGKLF True True GENSGIGKLF 47.426775 511.269061267376 872102.8125 8382.0 ENSG00000129534|ENST00000310806|MIS18BP1 6.474110285441081 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8391 47.437 320.0 97063.0 25 0 6107.6 -1 0 52 881.4133537592872 1760.8121545853744 2 881.4127685427666 MULTI CID FTMS 0 0 0 8390 158889.328125 0.3314383060153887 4 -0.3192787170410156 1 2 Y{M(Oxidation (M))|F}ANQQA[CS]VC(Carbamidomethyl (C)){I|L} 12 -1 63.286 0.0 0.0 3.5942 0.0 0.0 358.232105047629 0.0 358.232105047629 0.0 56.29670030985565 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 Y{M(Oxidation (M))|F}ANQQA[CS]VC(Carbamidomethyl (C)){I|L} 3.5942 - 664 + 1 1.995 27557.2 1.0 4794 3595 8390 DOHH2_400M_050219_2,8391 DOHH2_400M_050219_2,8391, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8392 47.439 115.0 496650.0 25 0 76988.0 + 26142 WSDGHLIYY 9 65 577.2694058447344 1152.5242587562686 2 577.2692138552666 MULTI CID FTMS 0 0 0 8390 415659.90625 0.2583568508967959 -2 0.0897445678710937 2 Unmodified _NPSPYHLYY_ nc|ENSG00000115762|Q96CS7-5|PLEKHB2;nc|ENSG00000115762|Q96CS7-2|PLEKHB2;nc|ENSG00000115762|Q96CS7-3|PLEKHB2;nc|ENSG00000115762|Q96CS7-6|PLEKHB2;nc|ENSG00000115762|Q96CS7-4|PLEKHB2;ENSG00000115762|ENST00000693505|PLEKHB2 15.847184025352805 0.4077185912009129 2 {I|L}S{I|L}WYY 6 6 34.654 0.0 0.0 3.0067 0.0 0.0 309.10701186347814 0.0 309.10701186347814 0.0 20.049406363485858 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 {I|L}S{I|L}WYY 3.0067 - 187 1 1.995 48930.7 1.0 4795 3595 8390 DOHH2_400M_050219_2,8392 DOHH2_400M_050219_2,8392,NPSPYHLYY False False WSDGHLIYY 47.438925 577.269213855267 20787426.0 8390.0 nc|ENSG00000115762|Q96CS7-5|PLEKHB2;;nc|ENSG00000115762|Q96CS7-2|PLEKHB2;;nc|ENSG00000115762|Q96CS7-3|PLEKHB2;;nc|ENSG00000115762|Q96CS7-6|PLEKHB2;;nc|ENSG00000115762|Q96CS7-4|PLEKHB2;;ENSG00000115762|ENST00000693505|PLEKHB2 5.4937896728515625 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8393 47.448 492.0 255640.0 25 0 29850.0 + 5561 DMLVKVNAL 9 125 501.7863568115229 1001.558160689846 2 501.7864868044853 MULTI CID FTMS 0 0 0 8390 225693.203125 0.4408587273935133 -1 0.0742034912109375 3 Unmodified _DMLVKVNAL_ ENSG00000106144|ENST00000310447|CASP2;ENST00000472067.1_1_7:143000848-143002161:+|nuORF;ENST00000493642.5_1_7:142991831-143002161:+|nuORF 88.95385435242217 0.0153473310052057 2 [MD]{I|L}VKVNA{I|L} 9 0 + 82.967 0.0 0.0 8.2838 8.2838 92.781 0.0 0.0 0.0 41.332946754800375 14.09256854528806 14.09256854528806 9.208187539523747 0 2.1237125054200234 2.0 0.0 1.1307196863200843 + + [MD]{I|L}VKVNA{I|L};[MD]{I|L}VKVGGA{I|L};[{I|L}V]KV[MD]NA{I|L};[{I|L}V]KVN[MD]A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V[MD]NA{I|L};[{I|L}V]KV[MD]GGA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}[MD]NA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VN[MD]A{I|L};[{I|L}V]KV{[DA]|[EG]}{I|L}[MN];[{I|L}V]KVGG[MD]A{I|L} 8.2838;7.3644;2.7621;2.2782;2.1433;1.8427;1.6669;1.6594;1.3747;1.3589 +;-;-;-;-;-;-;-;-;- + 865 + 1 1.995 99172.5 1.0 4796 3595 8390 DOHH2_400M_050219_2,8393 DOHH2_400M_050219_2,8393,DMLVKVNAL True True DMLVKVNAL 47.447604 501.786486804485 2391720.5 8390.0 ENSG00000106144|ENST00000310447|CASP2;;ENST00000493642.5_1_7:142991831-143002161:+|nuORF;;ENST00000472067.1_1_7:143000848-143002161:+|nuORF 5.962485631306966 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8394 47.453 323.0 148860.0 25 0 16724.0 + -1 TIMPKDIQL 9 91 537.7989421613602 1073.5833313895205 2 537.7999755740166 MULTI CID FTMS 0 0 0 8390 110705.2578125 0.7932798899528699 -5 0.1885719299316406 4 Oxidation (M) _TIM(Oxidation (M))PKDIQL_ ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7;ENSG00000203852|ENST00000403683|H3C15;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197409|ENST00000356476|H3C4;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENSG00000203811|ENST00000369158|H3C14;ENSG00000275714|ENST00000613854|H3C1;ENSG00000188375|ENST00000340398|H3-5;ENSG00000277775|ENST00000618052|H3C7;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENSG00000197153|ENST00000359303|H3C12;ENSG00000132475|ENST00000254810|H3-3B;ENSG00000168148|ENST00000366696|H3-4;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;ENSG00000275379|ENST00000616365|H3C11;ENSG00000163041|ENST00000366815|H3-3A 26.268140514670165 0.1969607489560049 2 [{I|L}T]{M(Oxidation (M))|F}P 4 -1 39.693 0.0 0.0 3.6972 0.0 0.0 0.0 612.3383883111936 612.3383883111936 24.20818753952375 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}T]{M(Oxidation (M))|F}P 3.6972 + + 102 + 1 1.995 42852.4 1.0 4797 3595 8390 DOHH2_400M_050219_2,8394 DOHH2_400M_050219_2,8394,TIMPKDIQL False False TIMPKDIQL 47.453485 537.799975574017 1339866.25 8390.0 ENSG00000278828|ENST00000685041|H3C10;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000197409|ENST00000356476|H3C4;;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000188375|ENST00000340398|H3-5;;ENSG00000277775|ENST00000618052|H3C7;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;;ENSG00000275379|ENST00000616365|H3C11;;ENSG00000163041|ENST00000366815|H3-3A 4.733356952667236 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8395 47.467 800.0 107660.0 25 0 9191.6 -1 YASLYFCC 8 113 513.70836189848 1025.40217086376 2 513.7086059451103 MULTI CID FTMS 0 0 0 8390 93669.1875 1.0 0 0.0 5 Carbamidomethyl (C) _YASLYFC(Carbamidomethyl (C))C_ ENSG00000106367|ENST00000337619|AP1S1;ENSG00000152056|ENST00000396654|AP1S3;ENSG00000182287|ENST00000672987|AP1S2;nc|ENSG00000106367|P61966-2|AP1S1;nc|ENSG00000152056|Q96PC3-2|AP1S3;nc|ENSG00000152056|Q96PC3-3|AP1S3;nc|ENSG00000152056|Q96PC3|AP1S3;nc|ENSG00000182287|P56377-2|AP1S2;nc|ENSG00000182287|P56377|AP1S2 10.183394434864962 0.7604730176254005 2 YT 2 -1 23.711 0.0 0.0 2.3124 0.0 0.0 0.0 758.269897590869 758.269897590869 6.4928876664371415 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YT 2.3124 - 111 + 1 1.995 70155.3 0.4199999868869781 4798 3595 8390 DOHH2_400M_050219_2,8395 DOHH2_400M_050219_2,8395,YASLYFCC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8396 47.481 800.0 165960.0 25 0 11408.0 + 36687 TDAEFRQMW 9 143 592.26344388032 1182.51233482744 2 592.2637817263603 MULTI CID FTMS 0 0 0 8390 89893.6875 0.5006541873166067 -1 0.0742034912109375 6 Unmodified _TDAEFRQMW_ ENSG00000129083|ENST00000439561|COPB1;ENST00000526527.1_1_11:14481741-14482839:-|nuORF 103.41943736471065 0.0091853052135676 2 TDAE{M(Oxidation (M))|F}GKETW 10 4 + 96.105 0.0 0.0 8.1272 8.1272 83.895 0.0 0.0 0.0 59.71320876157616 13.010299956639813 13.010299956639813 2.220938031831565 0 2.2728787452803374 1.3979400086720375 0.3807196863200844 0.6307196863200843 TDAE{M(Oxidation (M))|F}GKETW;TDAE{M(Oxidation (M))|F}WQTW;TDAE{M(Oxidation (M))|F}GVQMW;TDAEG{M(Oxidation (M))|F}KETW;TDAEW{M(Oxidation (M))|F}QTW;TDAEG{M(Oxidation (M))|F}VQMW;TDAE{M(Oxidation (M))|F}WGATW;TDAE{M(Oxidation (M))|F}GK{M(Oxidation (M))|F}G[DP];TDAE{M(Oxidation (M))|F}G[VS]ATW;TDADA{M(Oxidation (M))|F}KETW 8.1272;7.9394;7.9331;7.659;7.5132;7.1694;7.1514;6.7935;6.7756;6.6574 -;-;-;-;-;-;-;-;-;- 10111 + 1 1.995 101851.6 0.4300000071525574 4799 3595 8390 DOHH2_400M_050219_2,8396 DOHH2_400M_050219_2,8396,TDAEFRQMW True True TDAEFRQMW 47.481152 592.26378172636 1112396.75 8390.0 ENSG00000129083|ENST00000439561|COPB1;;ENST00000526527.1_1_11:14481741-14482839:-|nuORF 7.549923261006673 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8397 47.495 800.0 275350.0 25 0 83191.0 -1 0 84 627.3672780155738 626.3600015489737 1 627.3672973513603 MULTI CID FTMS 0 0 0 8390 104909.4296875 0.2492014586120248 -2 0.0897445678710937 7 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MH 4 -1 23.645 0.0 0.0 3.775 0.0 0.0 0.0 95.11541748816084 95.11541748816084 7.447274948966935 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MH 3.775 - 45 1 1.995 163126.6 0.4699999988079071 4800 3595 8390 DOHH2_400M_050219_2,8397 DOHH2_400M_050219_2,8397, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8399 47.513 800.0 119450.0 25 0 34673.0 + 889 AEWDQVTVY 9 112 555.7591614828965 1109.503770032593 2 556.2750121951103 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _AEWDQVTVY_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-3|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 12.531546534597751 0.4974689918368763 2 EE[{I|L}A]{I|L}S{I|L}P 8 8 30.962 0.0 0.0 2.7906 0.0 0.0 0.0 254.03124170076617 254.03124170076617 9.357551360547411 0.0 0.0 0.0 0 0.0 1.154901959985743 1.3829131673969606 0.0 EE[{I|L}A]{I|L}S{I|L}P 2.7906 - 376 1 1.995 77966.7 0.4300000071525574 4801 3596 8398 DOHH2_400M_050219_2,8399 DOHH2_400M_050219_2,8399,AEWDQVTVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8400 47.515 122.0 433230.0 25 0 91466.0 42023 VQRLLYVP 8 62 494.3010634317772 986.5875739303544 2 494.3008605837822 MULTI CID FTMS 0 0 0 8398 421399.1875 0.50114423347432 -1 0.068206787109375 2 Unmodified _VQRLLYVP_ ENSG00000126107|ENST00000372172|HECTD3 2.889219685676258 0.8067950007271085 2 TY 2 7 16.198 0.0 0.0 1.6418 0.0 0.0 704.4655779360169 0.0 704.4655779360169 0.0 10.511525224473813 0.0 0.0 0 0.0 0.0 0.0 0.0 TY 1.6418 - 22 + 1 1.995 48891.3 1.0 4802 3596 8398 DOHH2_400M_050219_2,8400 DOHH2_400M_050219_2,8400,VQRLLYVP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8401 47.521 305.0 157230.0 25 0 18484.0 + 11135 GEIEGLNDTF 10 83 547.7538142218959 0 547.7540161013603 PEAK CID FTMS 0 0 0 8398 161760.328125 0.8177770633393143 -1 0.068206787109375 3 Unmodified _GEIEGLNDTF_ ENSG00000143401|ENST00000583931|ANP32E;nc|ENSG00000143401|Q9BTT0-2|ANP32E 37.97399986684836 0.1321455838593572 2 RGE{I|L} 4 8 9.87 0.0 0.0 0.90261 0.0 0.0 452.1876078365668 183.0414217584594 635.2290295950262 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 RGE{I|L} 0.90261 - 76 + 1 1.995 44356.2 1.0 4803 3596 8398 DOHH2_400M_050219_2,8401 DOHH2_400M_050219_2,8401,GEIEGLNDTF False True GEIEGLNDTF 47.520812 547.75401610136 1267513.75 8398.0 nc|ENSG00000143401|Q9BTT0-2|ANP32E;;ENSG00000143401|ENST00000583931|ANP32E 5.66237751642863 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8402 47.531 608.0 189490.0 25 0 40297.0 + 38828 TVGVIVRL 8 98 428.78458744928594 855.5546219653719 2 428.7842590212822 MULTI CID FTMS 0 0 0 8398 141189.796875 0.4606713109627588 -1 0.068206787109375 4 Unmodified _TVGVIVRL_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 34.10243960390752 0.3329570729325616 2 {[TV]|[{I|L}S]}GV{I|L}V[R{I|L}] 8 0 + 55.195 0.0 0.0 6.4513 6.4513 92.92 0.0 0.0 0.0 45.0206926348982 6.989700043360188 6.989700043360188 22.998037644757048 0 0.805462187404089 2.0 0.0 0.3494850021680094 + + {[TV]|[{I|L}S]}GV{I|L}V[R{I|L}];{[TV]|[{I|L}S]}{I|L}[VG]V[R{I|L}] 6.4513;3.7632 +;- + 129 + 1 1.995 96222.1 1.0 4804 3596 8398 DOHH2_400M_050219_2,8402 DOHH2_400M_050219_2,8402,TVGVIVRL False True TVGVIVRL 47.531431 428.784259021282 1575751.875 8398.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 1.1379071076711018 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8403 47.539 446.0 144780.0 25 0 10230.0 + 35316 SSSPVIFHV 9 96 486.7615136486966 971.5084743641931 2 486.7612182497978 MULTI CID FTMS 0 0 0 8398 125695.1328125 1.0 0 0.0 5 Unmodified _SSSPVIFHV_ ENST00000357606.7_1_12:56221676-56222300:-|nuORF 49.66892048692302 0.0410958345688192 2 {[CA]|SS}SPV{I|L}{M(Oxidation (M))|F}HV 9 0 + 48.045 0.0 0.0 4.9454 4.9454 85.989 0.0 0.0 0.0 29.008920240978554 8.26397541348014 8.26397541348014 14.752551605802942 0 0.3054621874040891 0.0 0.5 0.0 + + {[CA]|SS}SPV{I|L}{M(Oxidation (M))|F}HV;{[CA]|SS}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VPDQ;[VP]S{I|L}[WK]DQ;{[CA]|SS}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[HK]{[CA]|SS};[VP]{I|L}{M(Oxidation (M))|F}H[VS]{[CA]|SS};[VP]{I|L}S[WK]DQ;{[TV]|[{I|L}S]}[WK]VPDQ;{[CA]|SS}S[KP][PA]W{I|L};[PS]V{I|L}[WK]DQ 4.9454;3.4269;1.5704;1.5566;1.4987;1.2106;1.0349;0.95862;0.95066 +;-;-;-;-;-;-;-;- + 166 + 1 1.995 53877.4 1.0 4805 3596 8398 DOHH2_400M_050219_2,8403 DOHH2_400M_050219_2,8403,SSSPVIFHV True True SSSPVIFHV 47.539349 486.761218249798 855803.875 8398.0 ENST00000357606.7_1_12:56221676-56222300:-|nuORF 7.428946495056152 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8404 47.553 800.0 122160.0 25 0 10751.0 + 31918 RTYDLYITY 9 78 604.3028362197578 1206.5911195063154 2 604.3019286990166 MULTI CID FTMS 0 0 0 8398 109643.703125 0.8306017675211276 -1 0.068206787109375 6 Unmodified _RTYDLYITY_ ENSG00000144848|ENST00000283290|ATG3;ENST00000467275.1_1_3:112256557-112257010:-|nuORF;ENST00000495756.5_1_3:112255248-112280627:-|nuORF;nc|ENSG00000144848|Q9NT62-2|ATG3 31.26834338654808 0.1333407332142048 2 [YT][RD]{I|L}Y{I|L}TY 9 2 + 67.113 0.0 0.0 5.5622 5.5622 80.855 0.0 0.0 0.0 5.536049848239344 16.478174818886373 5.536049848239344 5.536049848239344 0 0.9247425010840048 1.3010299956639813 0.4247425010840047 0.3494850021680094 [YT][RD]{I|L}Y{I|L}TY;[{I|L}T]Y[RD]Y{I|L}TY;[YT]{I|L}[RD]Y{I|L}TY;{[QN]|[E{I|L}]|[KN]}{I|L}[{M(Oxidation (M))|F}T][HA]{I|L}TY;[Y{I|L}]T[RD]Y{I|L}TY;{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}E][RH]{I|L}TY;{[QN]|[E{I|L}]|[KN]}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}[QP]{I|L}TY;{[QN]|[E{I|L}]|[KN]}A{[WS]|[C(Carbamidomethyl (C)){I|L}]}[QP]{I|L}TY;[{I|L}T]WW[QP]{I|L}TY;{[QN]|[E{I|L}]|[KN]}{I|L}[{M(Oxidation (M))|F}T][RH]EY 5.5622;5.1034;5.0231;4.198;3.6953;3.5494;3.5494;3.5494;3.4034;2.9927 -;-;-;-;-;-;-;-;-;- 266 1 1.995 73969.0 0.4699999988079071 4806 3596 8398 DOHH2_400M_050219_2,8404 DOHH2_400M_050219_2,8404,RTYDLYITY False True RTYDLYITY 47.553199 604.301928699017 799932.0625 8398.0 ENSG00000144848|ENST00000283290|ATG3;;ENST00000467275.1_1_3:112256557-112257010:-|nuORF;;nc|ENSG00000144848|Q9NT62-2|ATG3;;ENST00000495756.5_1_3:112255248-112280627:-|nuORF 6.59403117497762 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8405 47.567 800.0 248830.0 25 0 28115.0 7025 EELDGLFRRY 10 109 649.3305341814639 1296.6465154297275 2 649.8247558474541 MULTI CID FTMS 0 0 0 -1 0 7 Unmodified _EELDGLFRRY_ ENSG00000116604|ENST00000348159|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D 34.40172386719151 0.2166836008404837 2 EE[{I|L}T]{I|L}{[ET]|[MV]}KATY 11 7 + 51.948 0.0 0.0 4.0063 4.0063 76.833 0.0 0.0 0.0 11.479951491177792 5.611757507782151 5.611757507782151 7.1932890090214485 0 0.3807196863200844 1.3010299956639813 0.4247425010840047 0.3494850021680094 EE[{I|L}T]{I|L}{[ET]|[MV]}KATY;EE{NN|[MP]|[D{I|L}]|[EV]}V[RK]Y[{M(Oxidation (M))|F}V];EE[VS]{I|L}RRY[{M(Oxidation (M))|F}V];EE[DV]{I|L}[RK]Y[{M(Oxidation (M))|F}V];[HA]TY{I|L}{[ET]|[MV]}KATY;Y[WH]V[RK]Y[{M(Oxidation (M))|F}V];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[NP]V{[ET]|[MV]}KATY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}D{[VA]|[{I|L}G]}[RN]ATY;[HA]{[YD]|[{M(Oxidation (M))|F}M]}V[RK]Y[{M(Oxidation (M))|F}V] 4.0063;3.4516;3.1579;2.79;2.2076;2.1392;1.8874;1.6902;0.6711 -;-;-;-;-;-;-;-;- 847 + 1 1.995 150883.3 0.449999988079071 4807 3596 8398 DOHH2_400M_050219_2,8405 DOHH2_400M_050219_2,8405,EELDGLFRRY False True RYYSGLIYTY 47.567039 649.824755847454 712450.0625 8398.0 ENSG00000100345|ENST00000216181|MYH9;;nc|ENSG00000133026|P35580-3|MYH10;;nc|ENSG00000133026|P35580-5|MYH10;;ENSG00000105357|ENST00000642316|MYH14;;nc|ENSG00000133026|P35580-2|MYH10;;nc|ENSG00000105357|Q7Z406-4|MYH14;;nc|ENSG00000105357|Q7Z406-5|MYH14;;nc|ENSG00000105357|Q7Z406-6|MYH14;;nc|ENSG00000105357|Q7Z406|MYH14;;nc|ENSG00000133026|P35580|MYH10;;ENSG00000133026|ENST00000360416|MYH10 3.9027259349823 2.0 False 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8406 47.581 800.0 67366.0 25 0 4038.3 + -1 FFFYCLFCFVI 11 65 781.8655196500428 1561.7164863668854 2 781.8645507693291 MULTI CID FTMS 0 0 0 8398 82862.3828125 1.0 0 0.0 8 2 Carbamidomethyl (C) _FFFYC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))FVI_ REV__ENSG00000164197|ENST00000389100|RNF180 3.5964929083625545 0.858179447565866 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQV{I|L} 13 -1 + 71.273 0.0 0.0 4.5638 4.5638 75.347 0.0 0.0 0.0 3.890552152696444 9.1909339397965 3.890552152696444 3.890552152696444 0 0.6677353201839438 1.5228787452803376 0.3807196863200844 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QNA{M(Oxidation (M))|F}YQV{I|L};[YQ][C(Carbamidomethyl (C))K]ENA{M(Oxidation (M))|F}YQV{I|L};[Y{M(Oxidation (M))|F}][DP]GENA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]NA{M(Oxidation (M))|F}YQV{I|L};[HD]{[CP]|[EA]}QQNA{M(Oxidation (M))|F}YQV{I|L};[Y{M(Oxidation (M))|F}][DP]WNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QNA{M(Oxidation (M))|F}Y[AG]V{I|L} 4.5638;4.3147;4.1442;3.9991;3.9828;3.9828;3.9828;3.8863;3.7665;3.7337 -;-;-;-;-;-;-;-;-;- 803 1 1.995 42215.6 0.4000000059604645 4808 3596 8398 DOHH2_400M_050219_2,8406 DOHH2_400M_050219_2,8406,FFFYCLFCFVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8407 47.596 800.0 55139.0 25 0 2890.1 + 20121 LKKKKKKLLFL 11 75 694.0000480316994 0 694.0001708865166 PEAK CID FTMS 0 0 0 8398 84484.15625 1.0 0 0.0 9 Unmodified _LKKKKKKLLFL_ REV__ENST00000336440.3_1_14:69259862-69260099:-|nuORF 0.0 0.4761840153648598 2 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.33219 0.0 0.0 947.7954624190644 288.09894739322505 1235.8944098122895 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.33219 + + 56 + 1 1.995 46678.6 0.4000000059604645 4809 3596 8398 DOHH2_400M_050219_2,8407 DOHH2_400M_050219_2,8407,LKKKKKKLLFL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8408 47.602 336.0 176610.0 25 0 34462.0 + 45259 YSDFPFHEDY 10 63 660.2647884702802 1318.5150240073604 2 660.2645141482353 MULTI CID FTMS 0 0 0 8398 158437.5 0.8283436655726648 -2 0.1424102783203125 10 Unmodified _YSDFPFHEDY_ ENSG00000076258|ENST00000367749|FMO4;ENST00000475780.5_1_1:171285408-171306524:+|nuORF 53.832793166522166 0.0576554960245129 2 YSD{M(Oxidation (M))|F}P{M(Oxidation (M))|F} 6 4 72.88 0.0 0.0 5.5275 0.0 0.0 0.0 559.1806928118019 559.1806928118019 31.03408749299639 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + YSD{M(Oxidation (M))|F}P{M(Oxidation (M))|F} 5.5275 + + 495 + 1 1.995 48933.4 1.0 4810 3596 8398 DOHH2_400M_050219_2,8408 DOHH2_400M_050219_2,8408,YSDFPFHEDY True True YSDFPFHEDY 47.602261 660.264514148235 5957727.0 8398.0 ENSG00000076258|ENST00000367749|FMO4;;ENST00000475780.5_1_1:171285408-171306524:+|nuORF 11.75560728708903 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8410 47.609 153.0 264030.0 25 0 56104.0 + 37248 TIMPKDIQL 9 67 529.7992520418954 1057.5839511505908 2 529.7994872927666 MULTI CID FTMS 0 0 0 8409 319144.71875 0.188981689967787 3 -0.1596641540527343 1 Unmodified _TIMPKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 18.1463463914782 0.3454829746528889 2 [{I|L}T][YV]Q{I|L}D 7 6 43.244 0.0 0.0 4.0889 0.0 0.0 0.0 222.1246737115844 222.1246737115844 28.63962578990254 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3494850021680094 [{I|L}T][YV]Q{I|L}D 4.0889 - 91 + 1 1.995 36022.2 1.0 4811 3597 8409 DOHH2_400M_050219_2,8410 DOHH2_400M_050219_2,8410,TIMPKDIQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8411 47.616 382.0 169110.0 25 0 11325.0 + 33024 SEPDFVAKF 9 86 520.2583260448015 1038.502099156403 2 520.2582885622978 MULTI CID FTMS 0 0 0 8409 154836.6875 0.0859489547818143 5 -0.2306289672851562 2 Unmodified _SEPDFVAKF_ ENSG00000179933|ENST00000319074|C14orf119 27.628801355627647 0.1796483985696185 2 {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F} 9 0 + 37.558 0.0 0.0 3.6166 3.6166 82.727 0.0 0.0 0.0 13.14589961925983 2.218487496163569 2.218487496163569 24.43697499232713 0 0.4247425010840047 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}PD[RH][W{I|L}];{[ES]|[DT]|[{I|L}C]}P[VP]V[HQ]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}P[VP]PD[W{I|L}];{[ES]|[DT]|[{I|L}C]}[RH]V[HQ]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}P[RH]D[W{I|L}];{[ES]|[DT]|[{I|L}C]}[RH]PD[W{I|L}] 3.6166;1.2635;1.138;1.0735;0.51419;0.44972;0.44972 +;-;-;-;-;-;- + 160 + 1 1.995 55314.9 1.0 4812 3597 8409 DOHH2_400M_050219_2,8411 DOHH2_400M_050219_2,8411,SEPDFVAKF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8412 47.618 117.0 350440.0 25 0 67935.0 43077 VYLNRKIV 8 69 502.8144207692196 1003.6142886052392 2 502.8140746951103 MULTI CID FTMS 0 0 0 8409 407183.03125 1.0 0 0.0 3 Unmodified _VYLNRKIV_ ENSG00000114859|ENST00000265593|CLCN2;ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-3|CLCN2;nc|ENSG00000114859|P51788-4|CLCN2;nc|ENSG00000114859|P51788-5|CLCN2 0.7936320650641473 0.8195151834710337 2 {I|L} 1 7 10.379 0.0 0.0 1.0341 0.0 0.0 872.5193617026986 0.0 872.5193617026986 0.0 4.894053504650309 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0341 + + 16 + 1 1.995 36647.8 1.0 4813 3597 8409 DOHH2_400M_050219_2,8412 DOHH2_400M_050219_2,8412,VYLNRKIV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8413 47.621 128.0 338550.0 25 0 40594.0 + 26335 NSDVSLLNY 9 79 512.7510033812989 1023.487453829398 2 512.7510864138603 MULTI CID FTMS 0 0 0 8409 344498.3125 0.5608203604835004 -1 0.1072731018066406 4 Unmodified _NSDVSLLNY_ ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1 45.69961567697781 0.0497987121815769 2 [NS]DVS{I|L} 6 3 32.655 0.0 0.0 3.1906 0.0 0.0 0.0 405.1770039605103 405.1770039605103 12.08220305641312 0.0 0.0 0.0 0 0.0 0.9208187539523752 1.1307196863200843 0.0 + [NS]DVS{I|L} 3.1906 + + 123 1 1.995 39040.7 1.0 4814 3597 8409 DOHH2_400M_050219_2,8413 DOHH2_400M_050219_2,8413,NSDVSLLNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8414 47.624 142.0 421080.0 25 0 45320.0 + 7027 EELDGLFRRY 10 67 433.22279507481977 1296.6465558246591 3 433.2223693728447 MULTI CID FTMS 0 0 0 8409 331825.4375 0.7543523109930237 -1 0.1072731018066406 5 Unmodified _EELDGLFRRY_ ENSG00000116604|ENST00000348159|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D 24.99096001346401 0.4071966087057876 2 EE{I|L}DY 5 5 55.745 0.0 0.0 4.2992 0.0 0.0 0.0 644.3642315158434 644.3642315158434 39.54705724461448 0.0 0.0 0.0 0 0.4247425010840047 1.154901959985743 0.5 0.0 EE{I|L}DY 4.2992 - 58 + 1 1.995 56659.2 1.0 4815 3597 8409 DOHH2_400M_050219_2,8414 DOHH2_400M_050219_2,8414,EELDGLFRRY False True EELDGLFRRY 47.623949 433.222369372845 2694671.75 8409.0 nc|ENSG00000116604|Q14814-4|MEF2D;;ENSG00000116604|ENST00000348159|MEF2D 4.02936855951945 3.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8415 47.627 138.0 276830.0 25 0 24533.0 + 5465 DLRIAHML 8 50 484.7710629667342 0 484.7710143923759 PEAK CID FTMS 0 0 0 8409 322301.375 1.0 0 0.0 6 Unmodified _DLRIAHML_ ENSG00000182378|ENST00000381657|PLCXD1;ENST00000484611.7_1_X:200851-207455:+|nuORF 26.88365393820708 0.2878692218834006 2 H 1 7 15.242 0.0 0.0 1.5754 0.0 0.0 262.1356176137951 565.3109330816817 827.4465506954768 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 + H 1.5754 + + 10 + 1 1.995 37212.5 1.0 4816 3597 8409 DOHH2_400M_050219_2,8415 DOHH2_400M_050219_2,8415,DLRIAHML False True DLRIAHML 47.626734 484.771014392376 1377074.75 8409.0 ENSG00000182378|ENST00000381657|PLCXD1;;ENST00000484611.7_1_X:200851-207455:+|nuORF 3.211760997772217 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8416 47.631 226.0 316410.0 25 0 49564.0 + 25164 MSDSYLPSYY 10 82 613.2576861965837 1224.5008194599673 2 613.2579833865166 MULTI CID FTMS 0 0 0 8409 186366.21875 0.8787753738268352 -1 0.1072731018066406 7 Unmodified _MSDSYLPSYY_ ENSG00000198492|ENST00000373812|YTHDF2;nc|ENSG00000198492|Q9Y5A9-2|YTHDF2 49.93300154707207 0.0805441195901191 2 {[C(Carbamidomethyl (C))E]|[WC]}YM{I|L}PSYY 9 5 {[C(Carbamidomethyl (C))E]|[WC]}YM + + 30.45 9.0854 1.5579 2.4868 2.4868 48.046 0.0 0.0 0.0 0.0 8.623405191175124 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {[C(Carbamidomethyl (C))E]|[WC]}YM{I|L}PSYY 2.4868 - 417 + 1 1.995 58701.8 1.0 4817 3597 8409 DOHH2_400M_050219_2,8416 DOHH2_400M_050219_2,8416,MSDSYLPSYY True True MSDSYLPSYY 47.631011 613.257983386517 1706738.125 8409.0 nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;;ENSG00000198492|ENST00000373812|YTHDF2 6.259936491648356 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8417 47.637 354.0 152540.0 25 0 15863.0 + 890 AEWDQVTVY 9 98 555.7591614828965 1109.503770032593 2 555.7587768435478 MULTI CID FTMS 0 0 0 8409 174105.5625 1.0 0 0.0 8 Unmodified _AEWDQVTVY_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-3|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 19.256988751693697 0.3154191944385105 2 [WD]Q{[CP]|[EA]}VTVY 9 4 [WD]Q{[CP]|[EA]}VT + + 17.959 14.186 1.7105 1.6186 1.6186 47.194 0.0 0.0 0.0 0.0 -1.869537093743293 -1.869537093743293 0.0 0 0.0 0.0 0.0 0.0 [WD]Q{[CP]|[EA]}VTVY 1.6186 - 266 + 1 1.995 46737.1 1.0 4818 3597 8409 DOHH2_400M_050219_2,8417 DOHH2_400M_050219_2,8417,AEWDQVTVY False True AEWDQVTVY 47.637417 555.758776843548 1003187.0625 8409.0 ENSG00000001497|ENST00000374811|LAS1L;;nc|ENSG00000001497|Q9Y4W2-3|LAS1L;;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 3.901628653208415 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8418 47.651 800.0 199720.0 25 0 27847.0 -1 LLAILFCALW 10 115 610.3485910952332 1218.6826292572664 2 610.3482543826103 MULTI CID FTMS 0 0 0 8409 173726.515625 1.0 0 0.0 9 Carbamidomethyl (C) _LLAILFC(Carbamidomethyl (C))ALW_ ENSG00000163661|ENST00000295927|PTX3 4.3292370932331545 0.7066112369704343 2 W 1 -1 11.99 0.0 0.0 0.98382 0.0 0.0 1014.5929361193744 0.0 1014.5929361193744 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.98382 + + 25 + 1 1.995 119616.7 0.6200000047683716 4819 3597 8409 DOHH2_400M_050219_2,8418 DOHH2_400M_050219_2,8418,LLAILFCALW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8419 47.665 800.0 67001.0 25 0 3658.5 -1 0 70 1006.1397860778956 3015.397528833887 3 1006.475634753704 MULTI CID FTMS 0 0 0 8409 160492.453125 1.0 0 0.0 10 2 [MN]P 3 -1 27.676 0.0 0.0 0.91782 0.0 0.0 0.0 2670.238171494296 2670.238171494296 10.853481135844874 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [MN]P 0.91782 - 88 1 1.995 44259.1 0.5099999904632568 4820 3597 8409 DOHH2_400M_050219_2,8419 DOHH2_400M_050219_2,8419, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8420 47.672 414.0 154520.0 25 0 18739.0 36514 TAFLRRKC 8 78 497.7824461025526 993.5503392719052 2 497.7823364138603 MULTI CID FTMS 0 0 0 8409 144379.859375 0.7227818813128845 -1 0.1072731018066406 11 Unmodified _TAFLRRKC_ ENST00000428040.6_1_6:30314274-30314612:+|nuORF 30.22481116460888 0.4082965392918993 2 [TA]{M(Oxidation (M))|F}{I|L}GS{I|L}TGK 10 6 + 65.092 0.0 0.0 6.5514 6.5514 94.814 0.0 0.0 0.0 53.30889824360467 9.832881222565248 9.832881222565248 65.09163486117373 0 0.805462187404089 1.6989700043360187 0.3494850021680094 0.0 [TA]{M(Oxidation (M))|F}{I|L}GS{I|L}TGK 6.5514 - 114 + 1 1.995 55954.4 1.0 4821 3597 8409 DOHH2_400M_050219_2,8420 DOHH2_400M_050219_2,8420,TAFLRRKC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8422 47.678 61.0 628070.0 25 0 141850.0 + 31717 RRRLQHLLCA 10 56 633.3694777048854 1264.7244024765707 2 633.3693115115166 MULTI CID FTMS 0 0 0 8421 955335.75 1.0 0 0.0 1 Unmodified _RRRLQHLLCA_ REV__ENSG00000141258|ENST00000268989|SGSM2;REV__nc|ENSG00000141258|O43147-5|SGSM2;REV__nc|ENSG00000141258|O43147|SGSM2 0.4583401331227399 0.7245164002484112 2 {I|L} 1 -1 2.2185 0.0 0.0 0.17541 0.0 0.0 957.5222368044988 191.0928438776 1148.615080682099 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.17541 + + 2 + 1 1.995 35087.5 1.0 4822 3598 8421 DOHH2_400M_050219_2,8422 DOHH2_400M_050219_2,8422,RRRLQHLLCA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8423 47.682 191.0 255380.0 25 0 47385.0 + 44065 YIRRFMRKL 9 66 641.8827421380392 1281.7509313428784 2 641.8827392458916 MULTI CID FTMS 0 0 0 8421 291677.78125 0.9305916423027116 1 -0.0735626220703125 2 Unmodified _YIRRFMRKL_ REV__ENSG00000146834|ENST00000310512|MEPCE;REV__nc|ENSG00000289690|Q7L2J0-2|MEPCE 0.6014990680409731 0.8936861360942873 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 42187.7 1.0 4823 3598 8421 DOHH2_400M_050219_2,8423 DOHH2_400M_050219_2,8423,YIRRFMRKL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8424 47.688 376.0 176940.0 25 0 21323.0 + 7162 EENTNILKF 9 87 554.2875164903646 1106.5604800475292 2 554.2875854372978 MULTI CID FTMS 0 0 0 8421 230070.1875 1.0 0 0.0 3 Unmodified _EENTNILKF_ ENSG00000138594|ENST00000308580|TMOD3 62.57269311338072 0.0246576765497938 2 EENTN{I|L}{I|L}K{M(Oxidation (M))|F} 9 0 + 71.539 0.0 0.0 6.465 6.465 84.625 0.0 0.0 0.0 24.13734275855269 6.020599913279625 6.020599913279625 6.020599913279625 0 0.6237125054200234 1.6989700043360187 0.0 0.75 + + EENTN{I|L}{I|L}K{M(Oxidation (M))|F};EENTN{I|L}{I|L}{M(Oxidation (M))|F}K;EENTGG{I|L}{I|L}K{M(Oxidation (M))|F};EEGGTN{I|L}{I|L}K{M(Oxidation (M))|F};EENTGG{I|L}{I|L}{M(Oxidation (M))|F}K;EEGGTN{I|L}{I|L}{M(Oxidation (M))|F}K;EEN[KA]E{I|L}K{M(Oxidation (M))|F};EEGGTGG{I|L}{I|L}K{M(Oxidation (M))|F};EEN[KA]E{I|L}{M(Oxidation (M))|F}K;EEGGTGG{I|L}{I|L}{M(Oxidation (M))|F}K 6.465;5.9209;5.6328;5.6328;5.0888;5.0888;4.955;4.8046;4.4109;4.2606 +;-;-;-;-;-;-;-;-;- + 346 + 1 1.995 56906.0 1.0 4824 3598 8421 DOHH2_400M_050219_2,8424 DOHH2_400M_050219_2,8424,EENTNILKF True True EENTNILKF 47.688332 554.287585437298 1268518.875 8421.0 ENSG00000138594|ENST00000308580|TMOD3 7.300589720408122 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8425 47.695 395.0 156240.0 25 0 18013.0 + 16613 KEEQVIQVW 9 101 579.8117790305669 1157.6090051279336 2 579.8119994997978 MULTI CID FTMS 0 0 0 8421 137472.8125 1.0 0 0.0 4 Unmodified _KEEQVIQVW_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 36.506200033944 0.094635877243972 2 {[QV]|[N{I|L}]|[RA]|[KV]}EEK{I|L}QVW 9 3 + 63.329 0.0 0.0 5.4707 5.4707 85.32 0.0 0.0 0.0 4.696596782814808 46.85432019533685 4.696596782814808 9.208187539523747 0 1.1677353201839438 1.0969100130080565 0.6747425010840047 0.7614393726401688 {[QV]|[N{I|L}]|[RA]|[KV]}EEK{I|L}QVW;{[QV]|[N{I|L}]|[RA]|[KV]}EEK{I|L}[AG]VW;[Q{I|L}]WW{I|L}QVW;[NP]HHK{I|L}QVW;[Q{I|L}]WW{I|L}[AG]VW;[NP]HHK{I|L}[AG]VW;{[QV]|[N{I|L}]|[RA]|[KV]}MTHAS[KA]W 5.4707;4.6753;3.9951;3.5924;3.195;2.797;2.0947 -;-;-;-;-;-;- 219 1 1.995 52792.8 1.0 4825 3598 8421 DOHH2_400M_050219_2,8425 DOHH2_400M_050219_2,8425,KEEQVIQVW True True KEEQVIQVW 47.695417 579.811999499798 1046046.75 8421.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 6.317088921864827 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8426 47.706 602.0 110520.0 25 0 7947.7 + 38130 TPMFREYSL 9 81 572.2807452832641 1142.546937633328 2 572.2785522341728 MULTI CID FTMS 0 0 0 8421 109706.9921875 1.0 0 0.0 5 Unmodified _TPMFREYSL_ ENSG00000182199|ENST00000328923|SHMT2;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 57.24910588100465 0.0276051374632116 2 TPM{I|L}E[TA][HM]{I|L} 10 6 + 83.676 0.0 0.0 7.3236 7.3236 80.976 0.0 0.0 0.0 47.92551530008844 8.207027803924873 8.207027803924873 0.8361343778773289 0 1.305462187404089 2.0 1.174742501084005 0.0 TPM{I|L}E[TA][HM]{I|L};TPM{I|L}[HV][MD]S{I|L};TP{I|L}ME[TA][HM]{I|L};TP{I|L}M[HV][MD]S{I|L};TPM{I|L}{M(Oxidation (M))|F}[PG][HM]{I|L};[TP]M{I|L}E[HD]TS{I|L};[TP]M{[QN]|[E{I|L}]|[KN]}E[HS]S{I|L};[TP]M{[QN]|[E{I|L}]|[KN]}EMP[VP];[TP]M{I|L}E[HD]ST{I|L};TP{I|L}M{M(Oxidation (M))|F}[PG][HM]{I|L} 7.3236;7.2505;6.6923;6.6191;6.032;5.4788;5.4564;5.2627;5.2611;5.0674 -;-;-;-;-;-;-;-;-;- 716 + 1 1.995 55497.2 1.0 4826 3598 8421 DOHH2_400M_050219_2,8426 DOHH2_400M_050219_2,8426,TPMFREYSL True True TPMFREYSL 47.70595 572.278552234173 623688.625 8421.0 ENST00000553837.5_1_12:57625333-57628141:+|nuORF;;ENSG00000182199|ENST00000328923|SHMT2;;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;;nc|ENSG00000182199|P34897-2|SHMT2;;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;;nc|ENSG00000182199|P34897-3|SHMT2;;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 6.995561599731445 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8427 47.72 800.0 94016.0 25 0 21813.0 16768 KFYSQLIVRGV 11 81 655.3825762091127 1308.7505994850253 2 655.3820068240166 MULTI CID FTMS 0 0 0 8421 91253.34375 0.2982682485472213 7 -0.2915992736816406 6 Unmodified _KFYSQLIVRGV_ ENSG00000182858|ENST00000330817|ALG12 2.498486711656943 0.8633599123570009 2 {I|L} 1 10 3.0989 0.0 0.0 0.23679 0.0 0.0 653.3154931391254 539.3288668268186 1192.644359965944 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.23679 + + 8 + 1 1.995 72674.0 0.4399999976158142 4827 3598 8421 DOHH2_400M_050219_2,8427 DOHH2_400M_050219_2,8427,KFYSQLIVRGV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8428 47.734 800.0 73206.0 25 0 17226.0 + 41364 VPKENSLIL 9 94 506.8058462332707 1011.5971395333414 2 506.8054687380791 MULTI CID FTMS 0 0 0 8421 92479.578125 1.0 0 0.0 7 Unmodified _VPKENSLIL_ ENSG00000131652|ENST00000326266|THOC6;nc|ENSG00000131652|Q86W42-2|THOC6;nc|ENSG00000131652|Q86W42-3|THOC6 22.736283301280096 0.2418982879461534 2 [NP]E{I|L}SVK{I|L}{I|L} 9 5 + 55.36 0.0 0.0 5.4725 5.4725 75.161 0.0 0.0 0.0 0.9691001300805624 16.478174818886373 0.9691001300805624 0.9691001300805624 0 0.9247425010840048 0.0 0.6549471895720985 0.0 [NP]E{I|L}SVK{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}SVK{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[NP]SVK{I|L}{I|L};[VP]MVVE{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[RN][RV]{I|L}{I|L};[VP][C(Carbamidomethyl (C))R]AA{I|L}{I|L}{I|L};[VP][C(Carbamidomethyl (C))R][RV]{I|L}{I|L} 5.4725;5.3767;4.8093;4.049;1.9484;1.8191;1.1787 -;-;-;-;-;-;- 140 1 1.995 50604.2 0.4099999964237213 4828 3598 8421 DOHH2_400M_050219_2,8428 DOHH2_400M_050219_2,8428,VPKENSLIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8429 47.746 718.0 59761.0 25 0 2788.9 + 7310 EEVNYINTF 9 91 564.763537219735 1127.51252150627 2 564.7637817263603 MULTI CID FTMS 0 0 0 8421 88370.78125 0.8205509066896517 -3 0.2457160949707031 8 Unmodified _EEVNYINTF_ ENSG00000175305|ENST00000308108|CCNE2;nc|ENSG00000175305|O96020-2|CCNE2 28.486842064014134 0.1687311288560894 2 T{M(Oxidation (M))|F} 2 7 19.253 0.0 0.0 1.7075 0.0 0.0 861.3858258049012 0.0 861.3858258049012 0.0 0.2942271115827566 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + T{M(Oxidation (M))|F} 1.7075 + + 178 + 1 1.995 38606.9 1.0 4829 3598 8421 DOHH2_400M_050219_2,8429 DOHH2_400M_050219_2,8429,EEVNYINTF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8431 47.753 126.0 290230.0 25 0 38360.0 26143 NPSPYHLYY 9 72 577.2694058447344 1152.5242587562686 2 577.2695190310478 MULTI CID FTMS 0 0 0 8430 299954.15625 0.1864389854708424 2 -0.0403289794921875 1 Unmodified _NPSPYHLYY_ ENSG00000020633|ENST00000308873|RUNX3;nc|ENSG00000020633|Q13761-2|RUNX3 15.847184025352805 0.4077185912009129 2 S{I|L}{I|L}WYY 6 6 30.138 0.0 0.0 2.615 0.0 0.0 309.1066761701188 0.0 309.1066761701188 0.0 15.53395642852614 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 S{I|L}{I|L}WYY 2.615 - 152 1 1.995 33660.9 1.0 4830 3599 8430 DOHH2_400M_050219_2,8431 DOHH2_400M_050219_2,8431,NPSPYHLYY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8432 47.762 532.0 140910.0 25 0 44138.0 -1 0 42 627.3672780155738 626.3600015489737 1 627.3669311404228 MULTI CID FTMS 0 0 0 8430 145614.515625 0.3458921642880414 2 -0.0403289794921875 2 2 Y 1 -1 3.0989 0.0 0.0 0.49475 0.0 0.0 127.51821795698 332.75104700260005 460.26926495958 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.49475 - 1 + 1 1.995 60852.2 1.0 4831 3599 8430 DOHH2_400M_050219_2,8432 DOHH2_400M_050219_2,8432, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8434 47.776 654.0 154330.0 25 0 28257.0 + 25165 MSDSYLPSYY 10 117 621.2551692923159 1240.4957856514318 2 621.2549316287041 MULTI CID FTMS 0 0 0 8433 141992.484375 1.0 0 0.0 1 Oxidation (M) _M(Oxidation (M))SDSYLPSYY_ ENSG00000198492|ENST00000373812|YTHDF2;nc|ENSG00000198492|Q9Y5A9-2|YTHDF2 61.357469665136826 0.0330252915653943 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSY{I|L} 6 4 34.46 0.0 0.0 2.7779 0.0 0.0 0.0 525.1993105174288 525.1993105174288 13.846662287851032 0.0 0.0 0.0 0 0.5 0.0 1.6094862925859053 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSY{I|L} 2.7779 + + 702 1 1.995 77013.8 1.0 4832 3600 8433 DOHH2_400M_050219_2,8434 DOHH2_400M_050219_2,8434,MSDSYLPSYY True False MSDSYLPSYY 47.775877 621.254931628704 222678.265625 8433.0 nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;;ENSG00000198492|ENST00000373812|YTHDF2 8.065950552622477 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8435 47.786 600.0 192970.0 25 0 16015.0 + 7490 EGYGRYLDL 9 110 543.2672278296694 1084.5199027261388 2 543.2671386599541 MULTI CID FTMS 0 0 0 8433 136604.765625 0.3616785445858829 -2 0.0894279479980468 2 Unmodified _EGYGRYLDL_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000446317.1_1_20:3471092-3471287:-|nuORF;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 55.50274090549119 0.0285720310785888 2 {NN|[MP]|[D{I|L}]|[EV]}YRGYAD{I|L} 9 4 + 63.348 0.0 0.0 5.8411 5.8411 88.03 0.0 0.0 0.0 29.053783369835315 29.614759055215 29.053783369835315 9.704999916446797 0 0.8807196863200843 1.6989700043360187 0.9247425010840048 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}YRGYAD{I|L};{NN|[MP]|[D{I|L}]|[EV]}YRGYW{I|L};{NN|[MP]|[D{I|L}]|[EV]}YRGYGE{I|L};{NN|[MP]|[D{I|L}]|[EV]}M[{I|L}A][HS]AD{I|L};{NN|[MP]|[D{I|L}]|[EV]}C(Carbamidomethyl (C))RY[{M(Oxidation (M))|F}V]{I|L};{NN|[MP]|[D{I|L}]|[EV]}CGRY[{M(Oxidation (M))|F}V]{I|L};{NN|[MP]|[D{I|L}]|[EV]}YRGC[{M(Oxidation (M))|F}V]{I|L};{NN|[MP]|[D{I|L}]|[EV]}YR[YQ]D{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y[VG]GYW{I|L};{NN|[MP]|[D{I|L}]|[EV]}M{[QG]|[NA]}Y[{M(Oxidation (M))|F}V]{I|L} 5.8411;4.9463;4.8261;4.5358;4.49;4.4428;4.2546;4.2324;4.0922;4.0759 -;-;-;-;-;-;-;-;-;- 577 1 1.995 88888.9 1.0 4833 3600 8433 DOHH2_400M_050219_2,8435 DOHH2_400M_050219_2,8435,EGYGRYLDL True True EGYGRYLDL 47.786375 543.267138659954 1883354.875 8433.0 ENST00000446317.1_1_20:3471092-3471287:-|nuORF;;ENST00000470585.5_1_1:38445118-38455637:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 4.790358543395996 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8437 47.791 117.0 325850.0 25 0 61607.0 + 13895 HVRRHAVL 8 59 494.3010634317772 986.5875739303544 2 494.3009826540947 MULTI CID FTMS 0 0 0 8436 431805.03125 0.5135192658532026 4 -0.1777076721191406 1 Unmodified _HVRRHAVL_ REV__ENSG00000130182|ENST00000576985|ZSCAN10;REV__nc|ENSG00000130182|Q96SZ4-2|ZSCAN10;REV__nc|ENSG00000130182|Q96SZ4-3|ZSCAN10;REV__nc|ENSG00000130182|Q96SZ4|ZSCAN10 2.577480529830294 0.808687252328423 2 {I|L} 1 -1 10.837 0.0 0.0 1.0985 0.0 0.0 855.4927690981262 0.0 855.4927690981262 0.0 6.858055349748442 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0985 + + 7 + 1 1.995 36545.1 1.0 4834 3601 8436 DOHH2_400M_050219_2,8437 DOHH2_400M_050219_2,8437,HVRRHAVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8438 47.805 800.0 49416.0 25 0 3943.4 -1 TIMPKDIQL 9 82 537.7989421613602 1073.5833313895205 2 537.7972289919853 MULTI CID FTMS 0 0 0 8436 50270.0390625 0.3602196665579123 1 -0.0465011596679687 2 Oxidation (M) _TIM(Oxidation (M))PKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 22.736283301280096 0.2418982879461534 2 [{I|L}T]{M(Oxidation (M))|F} 3 -1 39.947 0.0 0.0 3.7209 0.0 0.0 0.0 709.3933344014921 709.3933344014921 20.90620618687793 0.0 0.0 0.0 0 1.0 2.0 0.25 0.0 [{I|L}T]{M(Oxidation (M))|F} 3.7209 + + 113 1 1.995 33654.3 0.5099999904632568 4835 3601 8436 DOHH2_400M_050219_2,8438 DOHH2_400M_050219_2,8438,TIMPKDIQL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8439 47.819 800.0 81372.0 25 0 24072.0 31713 RRRHAFRRQA 10 69 677.3960592164915 1352.777565499783 2 677.3959228396416 MULTI CID FTMS 0 0 0 8436 117367.5078125 0.4571539606837103 -2 0.0403289794921875 3 Unmodified _RRRHAFRRQA_ ENSG00000022567|ENST00000517878|SLC45A4;nc|ENSG00000022567|Q5BKX6-2|SLC45A4;nc|ENSG00000022567|Q5BKX6-3|SLC45A4;nc|ENSG00000022567|Q5BKX6|SLC45A4 0.4007161486938917 0.7247829448918255 2 Y 1 10 10.713 0.0 0.0 0.79195 0.0 0.0 1171.7033905503672 0.0 1171.7033905503672 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.79195 - 8 + 1 1.995 62589.5 0.4600000083446502 4836 3601 8436 DOHH2_400M_050219_2,8439 DOHH2_400M_050219_2,8439,RRRHAFRRQA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8440 47.833 800.0 176710.0 25 0 7685.8 -1 0 81 1082.5209019619697 5407.568127476848 5 1083.123217761517 MULTI CID FTMS 0 0 0 8436 147682.5625 1.0 0 0.0 4 2 AAAAAAA[HV] 9 -1 47.625 0.0 0.0 0.8807 0.0 0.0 4656.184586023916 0.0 4656.184586023916 0.0 27.44727494896693 0.0 0.0 0 0.0 0.0 0.0 0.0 AAAAAAA[HV] 0.8807 - 106 1 1.995 100455.8 0.4600000083446502 4837 3601 8436 DOHH2_400M_050219_2,8440 DOHH2_400M_050219_2,8440, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8442 47.851 800.0 115310.0 25 0 18954.0 + 7026 EELDGLFRRY 10 83 649.3305341814639 1296.6465154297275 2 649.3309814333916 MULTI CID FTMS 0 0 0 8441 80346.2109375 0.2357853355367414 4 -0.1930274963378906 1 Unmodified _EELDGLFRRY_ ENSG00000116604|ENST00000348159|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D 38.17557092003332 0.1768326257063233 2 EE{NN|[MP]|[D{I|L}]|[EV]}Y 5 5 45.445 0.0 0.0 3.5048 0.0 0.0 0.0 644.3624459902818 644.3624459902818 9.471580313422194 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.4247425010840047 EE{NN|[MP]|[D{I|L}]|[EV]}Y 3.5048 - 77 + 1 1.995 72922.5 0.5899999737739563 4838 3602 8441 DOHH2_400M_050219_2,8442 DOHH2_400M_050219_2,8442,EELDGLFRRY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8443 47.855 262.0 177510.0 25 0 9752.5 + 30001 QTETGTPYMLY 11 72 652.2976082018314 1302.5806634704627 2 652.2975341677666 MULTI CID FTMS 0 0 0 8441 194374.125 0.8613924055453701 -1 0.0465011596679687 2 Unmodified _QTETGTPYMLY_ ENSG00000167325|ENST00000300738|RRM1 36.506200033944 0.2662161991516171 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[HA]PYM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 10 6 + 49.142 0.0 0.0 3.7727 3.7727 82.679 0.0 0.0 0.0 3.290587192642249 20.72559982972642 3.290587192642249 20.199178382953065 0 0.0 1.5228787452803376 1.1237125054200234 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[HA]PYM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[DP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}M{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[NP]R{[{M(Oxidation (M))|F}C]|[YS]}P{M(Oxidation (M))|F}E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[NP]R{[{M(Oxidation (M))|F}C]|[YS]}{I|L}EM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[NP][VG]{[{M(Oxidation (M))|F}C]|[YS]}P{M(Oxidation (M))|F}E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[QT]QNT{[WT]|[RM]}M{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[QT]QNTAA{M(Oxidation (M))|F}E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[NP]H[HS]{[WT]|[RM]}M{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[NP]H[HS]AA{M(Oxidation (M))|F}E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3.7727;2.222;1.8136;1.7784;1.11;1.0552;0.5548;0.55136;0.05096 -;-;-;-;-;-;-;-;- 441 1 1.995 44297.2 1.0 4839 3602 8441 DOHH2_400M_050219_2,8443 DOHH2_400M_050219_2,8443,QTETGTPYMLY False True QTETGTPYMLY 47.85546 652.297534167767 1069866.0 8441.0 ENSG00000167325|ENST00000300738|RRM1 1.7300431330998738 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8444 47.861 311.0 175600.0 25 0 15794.0 + + 20961 NLKIKWENL 9 100 579.3373413653921 1156.6601297975842 2 579.3375121951103 MULTI CID FTMS 0 0 0 8441 140002.96875 0.9964435725748068 -1 0.0465011596679687 3 Unmodified _LNKLLICNNL_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 85.27202061508552 0.012747187882667 2 {[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VW 9 -1 + 75.468 0.0 0.0 6.5246 6.5246 78.779 0.0 0.0 0.0 21.51068672026824 0.8541549992214641 0.8541549992214641 0.8541549992214641 0 1.305462187404089 2.0 0.3807196863200844 1.274227503252014 {[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VW;{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}K[WE]N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}K[WE]GG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}{[ES]|[DT]|[{I|L}C]}{[QV]|[N{I|L}]|[RA]|[KV]}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KEE[Q{I|L}][RK];[K{I|L}]N{I|L}{[ES]|[DT]|[{I|L}C]}{[QV]|[N{I|L}]|[RA]|[KV]}N{I|L};[K{I|L}]NEE[Q{I|L}][RK] 6.5246;6.4508;5.4176;4.1711;3.2527;1.6916;0.77312 -;-;-;-;-;-;- 345 + 1 1.995 45243.0 1.0 4840 3602 8441 DOHH2_400M_050219_2,8444 DOHH2_400M_050219_2,8444,LNKLLICNNL False False NLKIKWENL 47.861141 579.33751219511 661200.1875 8441.0 ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 4.875502109527588 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8445 47.875 800.0 137000.0 25 0 12563.0 6866 EEEELASTPP 10 115 551.2517412639742 1100.4889295947482 2 551.2514526247978 MULTI CID FTMS 0 0 0 8441 113833.2421875 1.0 0 0.0 4 Unmodified _EEEELASTPP_ ENSG00000149136|ENST00000278412|SSRP1 30.63653989081413 0.2803493085145199 2 {[TV]|[{I|L}S]}EAA{I|L} 6 8 45.896 0.0 0.0 4.1705 0.0 0.0 0.0 513.1488166399232 513.1488166399232 30.411159568492465 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 2.079689690656103 0.0 {[TV]|[{I|L}S]}EAA{I|L} 4.1705 - 365 1 1.995 87762.3 0.4600000083446502 4841 3602 8441 DOHH2_400M_050219_2,8445 DOHH2_400M_050219_2,8445,EEEELASTPP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8447 47.885 426.0 175040.0 25 0 34824.0 + 45260 YSDFPFHEDY 10 80 660.2647884702802 1318.5150240073604 2 660.2644531130791 MULTI CID FTMS 0 0 0 8446 184993.0 0.967181252703962 5 -0.3341751098632812 1 Unmodified _YSDFPFHEDY_ ENSG00000076258|ENST00000367749|FMO4;ENST00000475780.5_1_1:171285408-171306524:+|nuORF 62.57269311338072 0.0298375429882549 2 YSD{M(Oxidation (M))|F}Y{[{M(Oxidation (M))|F}D]|MM}S{I|L}Y 10 4 + 90.372 0.0 0.0 6.8541 6.8541 93.224 0.0 0.0 0.0 54.50827206916173 14.146518864155126 14.146518864155126 16.977437731477423 0 1.3494850021680094 2.0 1.305462187404089 0.0 YSD{M(Oxidation (M))|F}Y{[{M(Oxidation (M))|F}D]|MM}S{I|L}Y;YSD{M(Oxidation (M))|F}Y[HV]{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};YSD{M(Oxidation (M))|F}Y[YV]{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};YSD{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}H]|[RQ]}[C(Carbamidomethyl (C))K]{[ES]|[DT]|[{I|L}C]};{[{M(Oxidation (M))|F}C]|[YS]}D{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}SDYY;YSD{M(Oxidation (M))|F}P{[QD]|[EN]|[WG]|[KD]|[RS]}[MT]{[ES]|[DT]|[{I|L}C]};{[{M(Oxidation (M))|F}C]|[YS]}D{M(Oxidation (M))|F}{I|L}YADYY;{[{M(Oxidation (M))|F}C]|[YS]}D{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}DSYY;{[{M(Oxidation (M))|F}C]|[YS]}D{M(Oxidation (M))|F}{I|L}YWYY;Y[HM]D{M(Oxidation (M))|F}DES{I|L}Y 6.8541;5.5665;5.5317;4.3941;4.3695;4.3627;4.2359;4.0076;3.7405;3.7396 -;-;-;-;-;-;-;-;-;- 1142 + 1 1.995 59908.3 1.0 4842 3603 8446 DOHH2_400M_050219_2,8447 DOHH2_400M_050219_2,8447,YSDFPFHEDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8448 47.892 368.0 114080.0 25 0 13200.0 + 26336 NSDVSLLNY 9 78 512.7510033812989 1023.487453829398 2 512.7510864138603 MULTI CID FTMS 0 0 0 8446 233188.140625 0.3796147973461834 5 -0.3341751098632812 2 Unmodified _NSDVSLLNY_ ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1 62.57269311338072 0.0246576765497938 2 [NS]DVS{I|L} 6 3 36.574 0.0 0.0 3.5734 0.0 0.0 0.0 405.1781025933228 405.1781025933228 15.542872863478252 0.0 0.0 0.0 0 0.0 0.6989700043360187 1.363673220883544 0.3807196863200844 + [NS]DVS{I|L} 3.5734 + + 99 1 1.995 37352.5 1.0 4843 3603 8446 DOHH2_400M_050219_2,8448 DOHH2_400M_050219_2,8448,NSDVSLLNY True True NSDVSLLNY 47.891739 512.75108641386 7663824.5 8446.0 nc|ENSG00000163349|Q86Z02-3|HIPK1;;nc|ENSG00000163349|Q86Z02-4|HIPK1;;ENSG00000163349|ENST00000426820|HIPK1;;nc|ENSG00000163349|Q86Z02-2|HIPK1 5.644473393758138 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8449 47.904 703.0 115170.0 25 0 10654.0 + 42114 VRNPFTVTV 9 102 516.7954565844622 1031.5763602357242 2 516.7956420779228 MULTI CID FTMS 0 0 0 8446 122905.5078125 0.5375064361420253 -3 0.1130485534667968 3 Unmodified _VRNPFTVTV_ ENSG00000236287|ENST00000413761|ZBED5 56.17704186161178 0.0281986971544335 2 {[TV]|[{I|L}S]}A[WR]TVTV 9 4 + 66.551 0.0 0.0 6.4514 6.4514 87.318 0.0 0.0 0.0 12.956349637772746 56.373949984654246 12.956349637772746 9.045860914111984 0 0.8494850021680094 1.5228787452803376 1.5994850021680094 0.0 {[TV]|[{I|L}S]}A[WR]TVTV;{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))R]VVVTV;[RV]N{M(Oxidation (M))|F}VVVTV;[RV]YP[QA]VTV;[RV]GG{M(Oxidation (M))|F}VVVTV;{[TV]|[{I|L}S]}A[WR]R{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[TV]|[{I|L}S]}A[WK]T[KG]AA 6.4514;5.5745;3.6688;2.9578;2.7761;2.0682;1.3906 -;-;-;-;-;-;- 307 1 1.995 64813.1 1.0 4844 3603 8446 DOHH2_400M_050219_2,8449 DOHH2_400M_050219_2,8449,VRNPFTVTV True True VRNPFTVTV 47.903951 516.795642077923 1970394.375 8446.0 ENSG00000236287|ENST00000413761|ZBED5 7.082717418670654 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8450 47.918 800.0 125030.0 25 0 9018.6 + 22619 LPYLSDHHCWR 11 89 713.8359692126483 1425.6573854920964 2 713.8369018435478 MULTI CID FTMS 0 0 0 8446 97685.9453125 0.8176133483911547 -3 0.1130485534667968 4 Unmodified _LPYLSDHHCWR_ REV__nc|ENSG00000152457|Q96SD1-4|DCLRE1C 10.073929032068715 0.8255972128077141 2 [EP]G{[{M(Oxidation (M))|F}H]|[RQ]}V[YG]EP 10 -1 36.577 0.0 0.0 2.5656 0.0 0.0 0.0 310.14238069318134 310.14238069318134 11.170664226808626 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 0.2887254899964357 0.0 [EP]G{[{M(Oxidation (M))|F}H]|[RQ]}V[YG]EP 2.5656 - 993 1 1.995 77953.5 0.4399999976158142 4845 3603 8446 DOHH2_400M_050219_2,8450 DOHH2_400M_050219_2,8450,LPYLSDHHCWR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8451 47.931 789.0 89037.0 25 0 16028.0 + 13312 HKPKPVVVT 9 106 502.8144207692196 1003.6142886052392 2 502.8139831423759 MULTI CID FTMS 0 0 0 8446 96299.640625 0.2365020966845607 6 -0.4221076965332031 5 Unmodified _HKPKPVVVT_ REV__ENSG00000139233|ENST00000266604|LLPH 1.844237919475145 0.850302753031785 2 {I|L} 1 -1 10.969 0.0 0.0 1.093 0.0 0.0 872.5194379966439 0.0 872.5194379966439 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.093 - 16 + 1 1.995 57808.4 1.0 4846 3603 8446 DOHH2_400M_050219_2,8451 DOHH2_400M_050219_2,8451,HKPKPVVVT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8452 47.938 392.0 98304.0 25 0 17236.0 + 14661 IINSNPIEL 9 79 506.7873842572764 1011.5602155813528 2 506.7873412966728 MULTI CID FTMS 0 0 0 8446 82371.046875 0.8385226437031077 1 -0.0634651184082031 6 Unmodified _IINSNPIEL_ ENSG00000075568|ENST00000186436|TMEM131 46.020951573049366 0.0490941689151868 2 {I|L}{I|L}N[NS]P 6 3 28.478 0.0 0.0 2.8153 0.0 0.0 0.0 370.1972754780903 370.1972754780903 7.024393559295277 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.3807196863200844 0.3807196863200844 + {I|L}{I|L}N[NS]P 2.8153 + + 95 1 1.995 35952.8 1.0 4847 3603 8446 DOHH2_400M_050219_2,8452 DOHH2_400M_050219_2,8452,IINSNPIEL True True IINSNPIEL 47.938434 506.787341296673 533554.75 8446.0 ENSG00000075568|ENST00000186436|TMEM131 3.6902844111124673 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8454 47.945 121.0 301980.0 25 0 73093.0 + 28183 PPWRLRERR 9 43 633.3694777048854 1264.7244024765707 2 633.3694335818291 MULTI CID FTMS 0 0 0 8453 491872.28125 0.514868496494557 6 -0.399139404296875 1 Unmodified _PPWRLRERR_ REV__ENSG00000161956|ENST00000321337|SENP3 0.5247636613948944 0.8963649302248013 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 36222.2 1.0 4848 3604 8453 DOHH2_400M_050219_2,8454 DOHH2_400M_050219_2,8454,PPWRLRERR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8455 47.952 415.0 157770.0 25 0 29140.0 + 30397 RARRPRAWLT 10 80 641.8827421380392 1281.7509313428784 2 641.8826171755791 MULTI CID FTMS 0 0 0 8453 214801.140625 0.6853183858093904 7 -0.4657516479492187 2 Unmodified _RARRPRAWLT_ REV__ENSG00000250510|ENST00000311268|GPR162;REV__ENST00000535220.1_1_12:6933100-6934099:+|nuORF 1.6526216038709556 0.7189921496796233 2 Y 1 -1 10.278 0.0 0.0 0.80184 0.0 0.0 1100.677351486236 0.0 1100.677351486236 0.0 3.200368920326941 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.80184 - 13 + 1 1.995 54099.0 1.0 4849 3604 8453 DOHH2_400M_050219_2,8455 DOHH2_400M_050219_2,8455,RARRPRAWLT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8456 47.964 681.0 149110.0 25 0 22135.0 + 13070 HDIAYLLIY 9 86 560.803526548836 1119.592500164472 2 560.8034545779228 MULTI CID FTMS 0 0 0 8453 93784.75 0.4569686991168317 -2 0.1055488586425781 3 Unmodified _HDIAYLLIY_ ENSG00000197140|ENST00000379907|ADAM32 15.847184025352805 0.4077185912009129 2 EQ{I|L}{I|L}{I|L}Y 6 5 48.448 0.0 0.0 4.3273 0.0 0.0 342.16584975410314 0.0 342.16584975410314 0.0 35.97418457616534 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 EQ{I|L}{I|L}{I|L}Y 4.3273 - 136 1 1.995 81990.9 1.0 4850 3604 8453 DOHH2_400M_050219_2,8456 DOHH2_400M_050219_2,8456,HDIAYLLIY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8458 47.98 800.0 74820.0 25 0 4419.5 -1 0 72 869.4240897882851 1736.83362664337 2 869.9254638552666 MULTI CID FTMS 0 0 0 8457 64310.76171875 0.7415056484584517 1 -0.0618209838867187 1 2 AGMTGYGMP 9 -1 61.151 0.0 0.0 3.5209 0.0 0.0 343.15569435161007 525.3153170221311 868.4710113737412 0.0 0.0 0.0 0.0 0 0.9291746928241128 0.0 0.0 0.0 AGMTGYGMP 3.5209 - 459 + 1 1.995 49726.6 0.949999988079071 4851 3605 8457 DOHH2_400M_050219_2,8458 DOHH2_400M_050219_2,8458, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8459 47.984 205.0 250470.0 25 0 23439.0 + 540 AEIEDIRVL 9 69 529.2984294516646 1056.582305970129 2 529.2975952029228 MULTI CID FTMS 0 0 0 8457 165131.09375 0.453328180247065 -2 0.0891227722167968 2 Unmodified _AEIEDIRVL_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B 32.78568957990786 0.1150597335874693 2 {[CP]|[EA]}{I|L}ED{I|L}[RV]{I|L} 9 0 + 46.132 0.0 0.0 4.3661 4.3661 85.754 0.0 0.0 0.0 22.21848749616356 3.4678748622465605 3.4678748622465605 32.99803764475705 0 1.0 0.0 0.4247425010840047 0.0 + + {[CP]|[EA]}{I|L}ED{I|L}[RV]{I|L};{[NV]|[RG]}[DN]D{I|L}[RV]{I|L};{[NV]|[RG]}M[WR]R[VP];{[NV]|[RG]}EWAA[RV]{I|L} 4.3661;1.243;0.10339;0.05498 +;-;-;- + 123 + 1 1.995 46302.8 1.0 4852 3605 8457 DOHH2_400M_050219_2,8459 DOHH2_400M_050219_2,8459,AEIEDIRVL True True AEIEDIRVL 47.984398 529.297595202923 4412355.0 8457.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 5.794271787007649 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8460 47.998 800.0 118410.0 25 0 7627.0 + 32980 SEMRFVQDL 9 107 562.7738407551464 1123.5331285770926 2 562.7737304568291 MULTI CID FTMS 0 0 0 8457 118840.234375 0.632339335663231 -1 0.0256576538085937 3 Unmodified _SEMRFVQDL_ ENSG00000167657|ENST00000545797|DAPK3;ENST00000595279.1_1_19:3959101-3961233:-|nuORF 63.22749603027936 0.0242951379232427 2 {NN|[MP]|[D{I|L}]|[EV]}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L} 9 3 + 81.297 0.0 0.0 7.2358 7.2358 91.088 0.0 0.0 0.0 9.71848749616356 16.478174818886373 9.71848749616356 9.208187539523747 0 1.3494850021680094 1.3979400086720375 0.0 0.6989700043360187 {NN|[MP]|[D{I|L}]|[EV]}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}V[AG]D{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L};{[MG]|[TS]}[PA]{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L};{[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}{M(Oxidation (M))|F}VQD{I|L};{[MG]|[TS]}[VS]E{M(Oxidation (M))|F}VQD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V[AG]D{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V[AG]D{I|L};[{M(Oxidation (M))|F}V]QV{M(Oxidation (M))|F}EQD{I|L} 7.2358;6.4162;6.4162;6.3708;5.8924;5.7882;5.6914;5.6005;5.5512;5.487 -;-;-;-;-;-;-;-;-;- 1458 1 1.995 76224.0 0.4799999892711639 4853 3605 8457 DOHH2_400M_050219_2,8460 DOHH2_400M_050219_2,8460,SEMRFVQDL True True SEMRFVQDL 47.99823 562.7754 992587.6875 8457.0 ENST00000595279.1_1_19:3959101-3961233:-|nuORF;;ENSG00000167657|ENST00000545797|DAPK3 7.655678113301595 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8461 48.012 800.0 55270.0 25 0 11015.0 + 21006 EELLGRSIYEY 11 80 685.9092334660374 1369.8039139988748 2 685.9082519412041 MULTI CID FTMS 0 0 0 8457 89793.2890625 1.0 0 0.0 4 Unmodified _LNTVKFLLLFY_ nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A;ENSG00000100644|ENST00000337138|HIF1A 1.4819007175156935 0.86815623132643 2 Y 1 10 13.495 0.0 0.0 0.98517 0.0 0.0 1188.7298306021935 0.0 1188.7298306021935 0.0 2.525749891599532 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.98517 + + 44 + 1 1.995 42753.8 0.4300000071525574 4854 3605 8457 DOHH2_400M_050219_2,8461 DOHH2_400M_050219_2,8461,LNTVKFLLLFY False False EELLGRSIYEY 48.012069 685.908251941204 71233.0 8457.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A -0.3392923374970754 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8462 48.026 800.0 165950.0 25 0 17098.0 + 31733 RRSDDMFTF 9 116 587.7688620663012 1173.5231711994022 2 587.7695800662041 MULTI CID FTMS 0 0 0 8457 82016.0546875 1.0 0 0.0 5 Unmodified _RRSDDMFTF_ ENSG00000153201|ENST00000283195|RANBP2 51.629811660486645 0.0367964933207742 2 [R{I|L}][MN]DM{M(Oxidation (M))|F}T{M(Oxidation (M))|F} 9 3 + 52.4 0.0 0.0 4.4652 4.4652 83.209 0.0 0.0 0.0 11.411962188136542 31.43053421393809 11.411962188136542 11.645293596321125 0 0.8252574989159953 0.0 0.3807196863200844 1.4476212463643423 [R{I|L}][MN]DM{M(Oxidation (M))|F}T{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}[TP]M{M(Oxidation (M))|F}T{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}V[WY]E{M(Oxidation (M))|F};RR[C(Carbamidomethyl (C))N]{[CA]|SS}{M(Oxidation (M))|F}T{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}V[WY]{M(Oxidation (M))|F}E;{[{M(Oxidation (M))|F}H]|[RQ]}{[NV]|[RG]}{I|L}[C(Carbamidomethyl (C))H]T{M(Oxidation (M))|F};[R{I|L}]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WY]{M(Oxidation (M))|F}E;[R{I|L}]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WY]E{M(Oxidation (M))|F};[YE]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RH]{M(Oxidation (M))|F}E;[YE]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RH]E{M(Oxidation (M))|F} 4.4652;3.4728;1.5746;1.5711;1.2296;1.2276;1.0198;1.0029;0.93509;0.91822 -;-;-;-;-;-;-;-;-;- 204 1 1.995 103606.4 0.4099999964237213 4855 3605 8457 DOHH2_400M_050219_2,8462 DOHH2_400M_050219_2,8462,RRSDDMFTF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8464 48.044 800.0 70747.0 25 0 7319.4 -1 EIGSALTRMC 10 99 577.2694058447344 1152.5242587562686 2 577.2693359255791 MULTI CID FTMS 0 0 0 8463 41818.19921875 0.0259924474260767 9 -0.4551239013671875 1 Carbamidomethyl (C),Oxidation (M) _EIGSALTRM(Oxidation (M))C(Carbamidomethyl (C))_ ENSG00000170873|ENST00000518547|MTSS1;nc|ENSG00000170873|O43312-4|MTSS1;nc|ENSG00000170873|O43312-5|MTSS1 18.1463463914782 0.5430639438673815 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QSW{I|L}YY 8 -1 + 44.161 0.0 0.0 3.8316 3.8316 74.996 0.0 0.0 0.0 2.218487496163561 29.55645316481359 2.218487496163561 6.034087492996392 0 0.6989700043360187 0.0 0.3252574989159953 0.805462187404089 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QSW{I|L}YY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QC(Carbamidomethyl (C)){I|L}{I|L}YY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QS{I|L}WYY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{I|L}C(Carbamidomethyl (C)){I|L}YY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[CG]{I|L}{I|L}YY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{I|L}SWYY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[AG]SW{I|L}YY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[AG]S{I|L}WYY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QS{I|L}YWY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{I|L}[CG]{I|L}YY 3.8316;3.3081;3.1809;2.7215;2.5044;2.3529;2.3291;2.0469;1.9596;1.9178 -;-;-;-;-;-;-;-;-;- 511 1 1.995 46102.0 0.4399999976158142 4856 3606 8463 DOHH2_400M_050219_2,8464 DOHH2_400M_050219_2,8464,EIGSALTRMC False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8465 48.047 169.0 324310.0 25 0 14809.0 14329 IEQIIAQGEQL 11 77 414.5632792493934 1240.6680083483802 3 414.5629760622978 MULTI CID FTMS 0 0 0 8463 304415.9375 0.7184823916198161 -1 0.0618209838867187 2 Unmodified _IEQIIAQGEQL_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;ENST00000460912.6_1_6:152443573-152489284:-|nuORF;nc|ENSG00000131018|Q8NF91-11|SYNE1;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-3|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1;nc|ENSG00000131018|Q8NF91-9|SYNE1 14.170726826480095 0.7403792890213726 2 T[YR]WQ{I|L} 6 9 24.975 0.0 0.0 2.0131 0.0 0.0 375.20613295722814 0.0 375.20613295722814 0.0 10.199111696616558 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.3494850021680094 T[YR]WQ{I|L} 2.0131 - 60 1 1.995 50631.5 1.0 4857 3606 8463 DOHH2_400M_050219_2,8465 DOHH2_400M_050219_2,8465,IEQIIAQGEQL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8466 48.061 800.0 224630.0 25 0 41617.0 -1 0 54 860.8846353256951 3439.50943543638 4 861.3868896365166 MULTI CID FTMS 0 0 0 8463 169389.3125 1.0 0 0.0 3 2 D 1 -1 3.0989 0.0 0.0 0.090098 0.0 0.0 2340.7143437389177 980.73395715885 3321.448300897768 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.090098 - 2 + 1 1.995 130921.6 0.5299999713897705 4858 3606 8463 DOHH2_400M_050219_2,8466 DOHH2_400M_050219_2,8466, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8467 48.075 800.0 133360.0 25 0 9176.7 -1 0 90 1016.1417724116544 3045.403487835163 3 1016.476489245892 MULTI CID FTMS 0 0 0 8463 133449.578125 0.5766187020488568 -1 0.0618209838867187 4 2 [NP]{I|L}N{M(Oxidation (M))|F} 5 -1 23.077 0.0 0.0 0.75776 0.0 0.0 0.0 2457.130323991518 2457.130323991518 5.668767403800793 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.2887254899964357 [NP]{I|L}N{M(Oxidation (M))|F} 0.75776 - 351 1 1.995 80163.9 0.4399999976158142 4859 3606 8463 DOHH2_400M_050219_2,8467 DOHH2_400M_050219_2,8467, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8468 48.085 600.0 155710.0 25 0 13823.0 + -1 VLCRLVCLSI 10 124 588.3360903342588 1174.6576277353174 2 588.3358032107353 MULTI CID FTMS 0 0 0 8463 101988.2109375 0.8371322750705241 -1 0.0618209838867187 5 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))RLVCLSI_ REV__ENST00000447069.5_3_2:201677557-201677948:+|nuORF 3.944395688203298 0.708391353636983 2 {M(Oxidation (M))|F} 1 -1 11.783 0.0 0.0 1.0031 0.0 0.0 1009.5784631618784 0.0 1009.5784631618784 0.0 4.793036574208873 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0031 - 47 + 1 1.995 73888.2 1.0 4860 3606 8463 DOHH2_400M_050219_2,8468 DOHH2_400M_050219_2,8468,VLCRLVCLSI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8469 48.099 800.0 263800.0 25 0 35374.0 + 5382 DLKPRNIFL 9 138 558.3323803364736 1114.6502077397472 2 558.3329345583916 MULTI CID FTMS 0 0 0 8463 97229.328125 0.1346207448290662 -2 0.0874786376953125 6 Unmodified _DLKPRNIFL_ ENSG00000086232|ENST00000199389|EIF2AK1;ENST00000481134.1_1_3:142170107-142170575:+|nuORF;nc|ENSG00000086232|Q9BQI3-2|EIF2AK1 71.92227651296345 0.0203558744033348 2 D{I|L}K{I|L}PNR{M(Oxidation (M))|F}{I|L} 9 3 + 77.89 0.0 0.0 6.9878 6.9878 81.198 0.0 0.0 0.0 28.97894779085682 9.562214181262604 9.562214181262604 1.7609125905568137 0 1.2302046884880935 2.0 0.0 0.6237125054200234 D{I|L}K{I|L}PNR{M(Oxidation (M))|F}{I|L};D{I|L}KP{I|L}NR{M(Oxidation (M))|F}{I|L};D{I|L}K{I|L}PGGR{M(Oxidation (M))|F}{I|L};D{I|L}K{I|L}PNR{I|L}{M(Oxidation (M))|F};D{I|L}KP{I|L}GGR{M(Oxidation (M))|F}{I|L};D{I|L}KP{I|L}NR{I|L}{M(Oxidation (M))|F};D{I|L}K{I|L}PGGR{I|L}{M(Oxidation (M))|F};D{I|L}KP{I|L}GGR{I|L}{M(Oxidation (M))|F};[RP]N{I|L}KD{I|L}{M(Oxidation (M))|F}{I|L};[RP]N{I|L}K{I|L}D{M(Oxidation (M))|F}{I|L} 6.9878;6.8299;6.1617;6.13;6.0038;5.972;5.3039;5.1459;4.388;3.924 -;-;-;-;-;-;-;-;-;- 1097 + 1 1.995 158381.6 0.4199999868869781 4861 3606 8463 DOHH2_400M_050219_2,8469 DOHH2_400M_050219_2,8469,DLKPRNIFL True True DLKPRNIFL 48.099029 558.332934558392 5017855.0 8463.0 ENSG00000086232|ENST00000199389|EIF2AK1;;nc|ENSG00000086232|Q9BQI3-2|EIF2AK1;;ENST00000481134.1_1_3:142170107-142170575:+|nuORF 4.524002234141032 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8470 48.114 800.0 74827.0 25 0 6773.5 -1 0 67 1010.9728511984052 2019.9311494636104 2 1011.475390613079 MULTI CID FTMS 0 0 0 8463 92668.984375 0.8821350624969276 -1 0.0618209838867187 7 2 QEEN{I|L}DP{[QN]|[E{I|L}]|[KN]} 9 -1 55.455 0.0 0.0 2.7454 0.0 0.0 934.4855824201188 0.0 934.4855824201188 0.0 43.30320662047981 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.805462187404089 QEEN{I|L}DP{[QN]|[E{I|L}]|[KN]} 2.7454 - 288 1 1.995 46061.8 0.3799999952316284 4862 3606 8463 DOHH2_400M_050219_2,8470 DOHH2_400M_050219_2,8470, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8471 48.125 601.0 131310.0 25 0 32332.0 40834 VLNFFLLSFPI 11 83 655.3826799068972 1308.7508068805944 2 655.3817016482353 MULTI CID FTMS 0 0 0 8463 82193.2421875 0.1190303976966738 -9 0.4236564636230469 8 Unmodified _VLNFFLLSFPI_ ENST00000591445.1_1_17:67501802-67515615:+|nuORF 1.1933415558491238 0.8695176722560516 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 7 1 1.995 81201.3 1.0 4863 3606 8463 DOHH2_400M_050219_2,8471 DOHH2_400M_050219_2,8471,VLNFFLLSFPI False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8473 48.143 800.0 73711.0 25 0 19709.0 + 36820 TEQWPYRTSW 10 79 677.3960592164915 1352.777565499783 2 677.3953735232353 MULTI CID FTMS 0 0 0 8472 111851.4921875 0.4356687265063734 4 -0.2793312072753906 1 Unmodified _TEKKRRDHRK_ ENSG00000134313|ENST00000256707|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;nc|ENSG00000134313|Q9ULH0-4|KIDINS220;nc|ENSG00000134313|Q9ULH0-3|KIDINS220 1.6526216038709556 0.7189921496796233 2 W 1 10 10.969 0.0 0.0 0.81086 0.0 0.0 1148.687460374586 0.0 1148.687460374586 0.0 0.3731680914845192 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.81086 - 32 + 1 1.995 55594.1 0.6499999761581421 4864 3607 8472 DOHH2_400M_050219_2,8473 DOHH2_400M_050219_2,8473,TEKKRRDHRK False False TEQWPYRTSW 48.142571 677.395373523235 176152.34375 8472.0 ENSG00000134313|ENST00000256707|KIDINS220;;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;;nc|ENSG00000134313|Q9ULH0-4|KIDINS220;;nc|ENSG00000134313|Q9ULH0-3|KIDINS220 2.2799766858418784 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8474 48.145 136.0 480740.0 25 0 99975.0 17435 KNDLLSELL 9 70 522.8002082632157 1043.5858635932314 2 522.8001586794853 MULTI CID FTMS 0 0 0 8472 441713.40625 0.1964053427345957 -2 0.1607627868652343 2 Unmodified _KNDLLSELL_ ENSG00000145703|ENST00000274364|IQGAP2;nc|ENSG00000145703|Q13576-2|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2 43.85829265575387 0.0542763391141878 2 {[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}{I|L}S{I|L}E{I|L} 9 4 + 60.493 0.0 0.0 5.7967 5.7967 76.242 0.0 0.0 0.0 0.7918124604762511 6.466364802867162 0.7918124604762511 0.7918124604762511 0 0.2742275032520141 0.0 1.555462187404089 0.7302046884880937 {[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}{I|L}S{I|L}E{I|L};[DN]K{I|L}{I|L}S{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}S{I|L}{I|L}E{I|L};[DN]K{I|L}S{I|L}{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GG{I|L}{I|L}S{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}{I|L}TVE{I|L};[DN]K{I|L}{I|L}TVE{I|L};{[TV]|[{I|L}S]}[DN]K{I|L}{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GG{I|L}S{I|L}{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GG{I|L}{I|L}TVE{I|L} 5.7967;5.7208;5.0278;4.952;4.9143;4.8128;4.7369;4.5638;4.1455;3.9304 -;-;-;-;-;-;-;-;-;- 351 1 1.995 56447.3 1.0 4865 3607 8472 DOHH2_400M_050219_2,8474 DOHH2_400M_050219_2,8474,KNDLLSELL True False SINDKIIEL 48.145329 522.800158679485 14838147.0 8472.0 nc|ENSG00000072310|P36956-5|SREBF1;;ENST00000470247.1_1_17:17721556-17722545:-|nuORF;;ENSG00000072310|ENST00000261646|SREBF1;;nc|ENSG00000072310|P36956-3|SREBF1;;nc|ENSG00000072310|P36956-6|SREBF1;;nc|ENSG00000198911|Q12772-2|SREBF2;;ENSG00000198911|ENST00000361204|SREBF2;;nc|ENSG00000072310|P36956-2|SREBF1;;nc|ENSG00000072310|P36956-4|SREBF1 2.917997439702352 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8475 48.15 223.0 169690.0 25 0 19485.0 + 9164 FGEKNGSWLY 10 61 600.7880263017332 1199.5614996702664 2 600.7881347537041 MULTI CID FTMS 0 0 0 8472 259579.515625 1.0 0 0.0 3 Unmodified _FGEKNGSWLY_ ENSG00000170734|ENST00000372236|POLH;nc|ENSG00000170734|Q9Y253-2|POLH 29.081581746732265 0.3152867722954398 2 W[WD]{M(Oxidation (M))|F}W{I|L}Y 7 7 48.02 0.0 0.0 4.0031 0.0 0.0 85.08983809638828 0.0 85.08983809638828 0.0 33.415922783183944 0.0 0.0 0 1.0 0.0 0.805462187404089 0.0 W[WD]{M(Oxidation (M))|F}W{I|L}Y 4.0031 - 262 1 1.995 31703.0 1.0 4866 3607 8472 DOHH2_400M_050219_2,8475 DOHH2_400M_050219_2,8475,FGEKNGSWLY False True FGEKNGSWLY 48.149541 600.788134753704 1665523.875 8472.0 nc|ENSG00000170734|Q9Y253-2|POLH;;ENSG00000170734|ENST00000372236|POLH 4.639400641123454 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8476 48.158 463.0 311870.0 25 0 86042.0 + 35142 SREGRPIWQL 10 108 621.3413706522222 1240.6681883712442 2 621.3417236208916 MULTI CID FTMS 0 0 0 8472 255370.4375 1.0 0 0.0 4 Unmodified _SREGRPIWQL_ ENSG00000113161|ENST00000287936|HMGCR;ENST00000504466.1_1_5:74645886-74647190:+|nuORF;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 26.120906184454547 0.3818084954799617 2 [WP]MVVKKE[QP] 10 9 + 22.253 0.0 0.0 1.7936 1.7936 73.706 0.0 0.0 0.0 5.263480968738463 1.7956061064919029 1.7956061064919029 9.070589637099287 0 0.6109243748081782 1.3010299956639813 0.0 0.0 [WP]MVVKKE[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}EKKVVMHQ;{[QD]|[EN]|[WG]|[KD]|[RS]}EKKVVMG[HA];{[QD]|[EN]|[WG]|[KD]|[RS]}EKK[KS]NHQ;{[QD]|[EN]|[WG]|[KD]|[RS]}EKK[KS]NG[HA];{[ES]|[DT]|[{I|L}C]}KT[{I|L}P]{[NV]|[RG]}E[QP];[DP]M[R{I|L}]KKE[QP] 1.7936;1.0625;0.89044;0.38138;0.20928;0.094697;0.071923 -;-;-;-;-;-;- 290 1 1.995 109304.2 1.0 4867 3607 8472 DOHH2_400M_050219_2,8476 DOHH2_400M_050219_2,8476,SREGRPIWQL False True SREGRPIWQL 48.15776 621.341723620892 1753499.75 8472.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR;;ENST00000504466.1_1_5:74645886-74647190:+|nuORF 7.399970690409343 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8477 48.166 460.0 339920.0 25 0 31173.0 + 6922 EEFQKELSQW 10 141 662.3146918531729 1322.6148307731455 2 662.3141357302666 MULTI CID FTMS 0 0 0 8472 250259.734375 0.167111685777479 -2 0.1607627868652343 5 Unmodified _EEFQKELSQW_ ENSG00000100109|ENST00000407690|TFIP11 136.8642669712571 0.0001827723315714 2 EE{M(Oxidation (M))|F}GAKE{I|L}SQW 11 2 + 108.34 0.0 0.0 8.1911 8.1911 87.196 0.0 0.0 0.0 14.087855461944216 14.087855461944216 14.087855461944216 4.778941817452022 0 2.258582007194973 1.3979400086720375 0.9749073637206092 2.2416440611282624 EE{M(Oxidation (M))|F}GAKE{I|L}SQW;EE{M(Oxidation (M))|F}GAGS{I|L}{I|L}SQW;EE{M(Oxidation (M))|F}QKE{I|L}SQW;EE{M(Oxidation (M))|F}QGS{I|L}{I|L}SQW;EE{M(Oxidation (M))|F}GQS{I|L}{I|L}SQW;EE{M(Oxidation (M))|F}GAKE{I|L}SGAW;EE{M(Oxidation (M))|F}GAKEKEAW;EE{M(Oxidation (M))|F}QKE{I|L}SGAW;EE{M(Oxidation (M))|F}GAGS{I|L}KEAW;EE{M(Oxidation (M))|F}QKEKEAW 8.1911;7.8298;7.7905;7.4264;7.3392;7.0511;6.9259;6.6477;6.5646;6.5252 -;-;+;-;-;-;-;-;-;- + 28776 + 1 1.995 118980.1 1.0 4868 3607 8472 DOHH2_400M_050219_2,8477 DOHH2_400M_050219_2,8477,EEFQKELSQW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8478 48.174 473.0 250890.0 25 0 21179.0 + 6284 DVDHGNFFTY 10 116 607.759463299681 1213.504373666162 2 607.7596923708916 MULTI CID FTMS 0 0 0 8472 179901.296875 0.5927058316982081 -1 0.0989418029785156 6 Unmodified _DVDHGNFFTY_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENSG00000276043|ENST00000650932|UHRF1;ENST00000540175.1_1_12:20704556-20705942:+|nuORF;nc|ENSG00000276043|Q96T88-2|UHRF1 99.7552728972412 0.0086345419122624 2 [YT]{[DS]|[MA]|[CV]|TT}GN{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY 10 3 + 88.443 0.0 0.0 7.2883 7.2883 88.23 0.0 0.0 0.0 6.989700043360188 15.026975159433531 6.989700043360188 6.989700043360188 0 1.274227503252014 1.5228787452803376 1.113982988912431 0.9947026752325154 [YT]{[DS]|[MA]|[CV]|TT}GN{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY;[DV][HD]GN{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY;[HD][DV]GN{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY;[YE][KC]N{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY;[YT]{[DS]|[MA]|[CV]|TT}GN{M(Oxidation (M))|F}T{M(Oxidation (M))|F}Y;[HD]GNVD{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY;[YT]N[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{M(Oxidation (M))|F}TY;[YE]MVD{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY;[YT]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))N]V{M(Oxidation (M))|F}TY;[YT]{[DS]|[MA]|[CV]|TT}GGG{M(Oxidation (M))|F}{M(Oxidation (M))|F}TY 7.2883;6.7123;6.3438;6.3191;6.1121;5.9522;5.8809;5.852;5.7358;5.7134 -;+;-;-;-;-;-;-;-;- + 4290 1 1.995 89896.6 1.0 4869 3607 8472 DOHH2_400M_050219_2,8478 DOHH2_400M_050219_2,8478,DVDHGNFFTY True True DVDHGNFFTY 48.174308 607.759692370892 2129349.25 8472.0 ENSG00000276043|ENST00000650932|UHRF1;;ENST00000540175.1_1_12:20704556-20705942:+|nuORF;;chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;;nc|ENSG00000276043|Q96T88-2|UHRF1 8.359776973724365 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8479 48.188 800.0 242690.0 25 0 25786.0 + 35242 SSEELLSLKY 10 144 584.8086528385337 1167.6027527438673 2 584.8085815310478 MULTI CID FTMS 0 0 0 8472 128119.5390625 0.3472002484027261 -2 0.1607627868652343 7 Unmodified _SSEELLSLKY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 163.68669969883206 1.5120248561637696e-06 2 SSEE{I|L}{I|L}S{I|L}KY 10 0 + 129.83 0.0 0.0 11.119 11.119 98.662 0.0 0.0 0.0 95.29118500272244 14.146518864155126 14.146518864155126 29.26693609624867 0 2.3243923658886185 1.5228787452803376 1.673877368056628 0.25 + + SSEE{I|L}{I|L}S{I|L}KY;SSEE{I|L}{I|L}S[YK]{I|L};SSEVV{I|L}{I|L}S[TA]Y;SS[TA]W{[NV]|[RG]}{I|L}KY;SSEVV{I|L}S{I|L}[TA]Y;SS{M(Oxidation (M))|F}[NP]{[NV]|[RG]}{I|L}KY;SS[RK]S{I|L}{[MS]|[{M(Oxidation (M))|F}A]}SW;SS[RK]{I|L}S{[MS]|[{M(Oxidation (M))|F}A]}SW;SSEVV{I|L}[HC]V[VP];S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}W{[NV]|[RG]}{I|L}KY 11.119;8.6125;4.8449;4.714;4.6262;4.501;2.5912;2.552;2.5093;2.1604 +;-;-;-;-;-;-;-;-;- + 2009 + 1 1.995 146803.5 0.5199999809265137 4870 3607 8472 DOHH2_400M_050219_2,8479 DOHH2_400M_050219_2,8479,SSEELLSLKY True True SSEELLSLKY 48.188141 584.808581531048 5130568.5 8472.0 ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;nc|ENSG00000134954|P14921-2|ETS1;;nc|ENSG00000134954|P14921-5|ETS1 8.093608697255453 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8480 48.202 800.0 93020.0 25 0 18582.0 7072 EELLLLRRER 10 99 663.8960027242318 1325.7774525152636 2 663.8958007693291 MULTI CID FTMS 0 0 0 8472 101821.296875 0.3468387759501183 -8 0.3787994384765625 8 Unmodified _EELLLLRRER_ ENSG00000162069|ENST00000572449|BICDL2;ENST00000572240.5_1_16:3080380-3081406:-|nuORF;ENST00000576826.1_1_16:3080380-3080641:-|nuORF;nc|ENSG00000162069|A1A5D9-2|BICDL2 3.944395688203298 0.708391353636983 2 W 1 10 13.099 0.0 0.0 0.98802 0.0 0.0 1121.6873321312776 0.0 1121.6873321312776 0.0 2.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.98802 - 40 + 1 1.995 68915.4 0.4699999988079071 4871 3607 8472 DOHH2_400M_050219_2,8480 DOHH2_400M_050219_2,8480,EELLLLRRER False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8481 48.209 313.0 200660.0 25 0 28824.0 + 7423 EGLPKPLTL 9 91 484.2948339440627 966.5751149549254 2 484.2949401736259 MULTI CID FTMS 0 0 0 8472 86381.0 0.2125181894554169 -4 0.2498855590820312 9 Unmodified _EGLPKPLTL_ ENSG00000206503|ENST00000376809|HLA-A;ENSG00000234745|ENST00000412585|HLA-B;ENST00000495183.5_1_6:29910749-29913287:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;nc|ENSG00000206503|P04439-2|HLA-A 43.85829265575387 0.0542763391141878 2 {[DA]|[EG]}{I|L}PK[{I|L}P]T{I|L} 9 0 {[DA]|[EG]}{I|L} + + 33.633 17.982 6.0112 3.4796 3.4796 50.104 0.0 0.0 0.0 0.0 13.355158699542429 0.0 0.0 0 0.3252574989159953 0.0 1.0994850021680094 0.0 + + {[DA]|[EG]}{I|L}PK[{I|L}P]T{I|L} 3.4796 + + 181 + 1 1.995 54039.5 1.0 4872 3607 8472 DOHH2_400M_050219_2,8481 DOHH2_400M_050219_2,8481,EGLPKPLTL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8483 48.226 767.0 99051.0 25 0 13462.0 + + 19368 RADQELLLY 9 92 560.803526548836 1119.592500164472 2 560.8037597537041 MULTI CID FTMS 0 0 0 8482 88330.2109375 0.4303913118585347 2 -0.1284294128417968 1 Unmodified _LEQRGLELY_ ENSG00000114450|ENST00000232564|GNB4 20.453626601364224 0.2830276176381075 2 {[QN]|[E{I|L}]|[KN]}N{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L}Y 9 -1 + 59.575 0.0 0.0 5.3211 5.3211 84.755 0.0 0.0 0.0 17.63682493045401 38.52715782384018 17.63682493045401 9.208187539523747 0 1.0 1.3979400086720375 0.2742275032520141 0.0 {[QN]|[E{I|L}]|[KN]}N{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}GG{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L}Y;{[MG]|[TS]}[PA]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L}Y 5.3211;4.4987;3.1167 -;-;- 102 1 1.995 62547.5 1.0 4873 3608 8482 DOHH2_400M_050219_2,8483 DOHH2_400M_050219_2,8483,LEQRGLELY False False RADQELLLY 48.226314 560.803759753704 3129207.0 8482.0 ENSG00000114450|ENST00000232564|GNB4 5.582535743713379 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8484 48.231 236.0 220560.0 25 0 18610.0 + + 19307 KESSTVFEL 9 75 520.2693651478497 1038.5241773624994 2 520.2696411013603 MULTI CID FTMS 0 0 0 8482 269378.5625 0.810472863292242 -1 0.08428955078125 2 Unmodified _LELFEEFL_ nc|ENSG00000103363|Q15370-2|ELOB;ENSG00000103363|ENST00000409906|ELOB 32.116972079565 0.368454113111938 2 [{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}V{M(Oxidation (M))|F}E{I|L} 8 -1 + 45.935 0.0 0.0 4.4231 4.4231 72.186 0.0 0.0 0.0 0.6694678963061307 34.96584697476848 0.6694678963061307 1.933115814076345 0 0.4247425010840047 0.0 1.2302046884880935 0.0 [{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}V{M(Oxidation (M))|F}E{I|L};{[MG]|[TS]}[VS]{[SA]|[TG]}V{M(Oxidation (M))|F}E{I|L};[{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}VE{M(Oxidation (M))|F}{I|L};{[MG]|[TS]}[VS]{[SA]|[TG]}VE{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}E][{I|L}A]{[WN]|[YH]}{M(Oxidation (M))|F}{I|L};[VP][YT]{[WN]|[YH]}{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[Y{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ][KQ]E{I|L} 4.4231;4.237;3.5971;3.4109;1.9623;1.9623;1.8695;1.805 -;-;-;-;-;-;-;- 136 1 1.995 45389.6 1.0 4874 3608 8482 DOHH2_400M_050219_2,8484 DOHH2_400M_050219_2,8484,LELFEEFL False False KESSTVFEL 48.230737 520.26964110136 2140489.0 8482.0 nc|ENSG00000103363|Q15370-2|ELOB;;ENSG00000103363|ENST00000409906|ELOB 1.1841046611467998 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8485 48.236 299.0 268360.0 25 0 20188.0 + 35248 SSENPWMTEY 10 107 622.2503380681054 1242.4861232030107 2 622.2504150271416 MULTI CID FTMS 0 0 0 8482 225312.875 0.7550426765956533 -2 0.1832313537597656 3 Unmodified _SSENPWMTEY_ ENSG00000154429|ENST00000284617|CCSAP;ENST00000483092.1_1_1:229460984-229462796:-|nuORF;nc|ENSG00000154429|Q6IQ19-2|CCSAP 72.96794272382148 0.0188410189619069 2 {[QD]|[EN]|[WG]|[KD]|[RS]}SSPWM 7 6 29.53 0.0 0.0 2.3767 0.0 0.0 0.0 408.1412495059983 408.1412495059983 6.571450803909755 0.0 0.0 0.0 0 0.75 0.0 0.6109243748081782 0.8252574989159953 {[QD]|[EN]|[WG]|[KD]|[RS]}SSPWM 2.3767 - 777 1 1.995 62157.9 1.0 4875 3608 8482 DOHH2_400M_050219_2,8485 DOHH2_400M_050219_2,8485,SSENPWMTEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8486 48.243 349.0 142570.0 25 0 45498.0 + 25147 MQNPNAIIL 9 75 507.2756007537532 1012.5366485743064 2 507.2763854861259 MULTI CID FTMS 0 0 0 8482 168033.25 0.925167137188076 -2 0.1832313537597656 4 Unmodified _MQNPNAIIL_ ENSG00000198836|ENST00000361510|OPA1;ENST00000475899.1_1_3:193355061-193361921:+|nuORF;nc|ENSG00000198836|O60313-11|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313|OPA1 42.09456458481378 0.0639583784996157 2 [NP]AN{[MG]|[TS]}A{I|L}{I|L}{I|L} 10 5 + 41.572 0.0 0.0 4.1057 4.1057 75.391 0.0 0.0 0.0 4.884381005764311 26.087353034733027 4.884381005764311 5.793037728310246 0 0.8182503180159344 0.0 0.0 0.8494850021680094 [NP]AN{[MG]|[TS]}A{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N[NP]A{I|L}{I|L}{I|L};[NP]AN{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L};[NP]AGG{[MG]|[TS]}A{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GG[NP]A{I|L}{I|L}{I|L};[NP]AGG{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L};[NP]AN{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L};[NP]A{I|L}N{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L};[NP]AGG{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L};[NP]A{I|L}GG{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L} 4.1057;3.5336;3.4606;3.2006;2.6242;2.5512;2.4465;2.1492;1.5371;1.2398 -;+;-;-;-;-;-;-;-;- + 134 1 1.995 44581.8 1.0 4876 3608 8482 DOHH2_400M_050219_2,8486 DOHH2_400M_050219_2,8486,MQNPNAIIL True True MQNPNAIIL 48.242537 507.276385486126 1360108.75 8482.0 ENST00000475899.1_1_3:193355061-193361921:+|nuORF;;ENSG00000198836|ENST00000361510|OPA1;;nc|ENSG00000198836|O60313-9|OPA1;;nc|ENSG00000198836|O60313-2|OPA1;;nc|ENSG00000198836|O60313-13|OPA1;;nc|ENSG00000198836|O60313|OPA1;;nc|ENSG00000198836|O60313-11|OPA1 6.198239326477051 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8487 48.252 523.0 151820.0 25 0 31007.0 -1 LVTGISFIIRM 11 92 633.3694777048854 1264.7244024765707 2 633.3690673708916 MULTI CID FTMS 0 0 0 8482 154885.28125 0.1621265416373249 10 -0.3795661926269531 5 Oxidation (M) _LVTGISFIIRM(Oxidation (M))_ ENST00000354300.4_1_12:110973101-110973269:-|nuORF 2.498486711656943 0.8633599123570009 2 {I|L}DS 3 -1 14.693 0.0 0.0 1.1617 0.0 0.0 255.2011613650457 691.3552950494749 946.5564564145208 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DS 1.1617 - 11 + 1 1.995 67200.2 1.0 4877 3608 8482 DOHH2_400M_050219_2,8487 DOHH2_400M_050219_2,8487,LVTGISFIIRM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8488 48.264 686.0 122700.0 25 0 11300.0 + 752 AEQPSGFTF 9 135 492.226861960336 982.439170987472 2 492.2266418337822 MULTI CID FTMS 0 0 0 8482 131229.5625 1.0 0 0.0 6 Unmodified _AEQPSGFTF_ ENSG00000198000|ENST00000442668|NOL8;nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8 15.847184025352805 0.4077185912009129 2 WT{M(Oxidation (M))|F} 3 7 22.457 0.0 0.0 2.2858 0.0 0.0 530.2332211357127 0.0 530.2332211357127 0.0 12.078343878162343 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 WT{M(Oxidation (M))|F} 2.2858 - 157 + 1 1.995 66529.1 1.0 4878 3608 8482 DOHH2_400M_050219_2,8488 DOHH2_400M_050219_2,8488,AEQPSGFTF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8489 48.274 598.0 88870.0 25 0 8638.2 + 38785 TVDNVQPLLY 10 81 581.3105591032632 1160.6065652733264 2 581.3107787966728 MULTI CID FTMS 0 0 0 8482 100420.1171875 0.930189684874094 -1 0.08428955078125 7 Unmodified _TVDNVQPLLY_ ENSG00000145332|ENST00000273963|KLHL8 71.92227651296345 0.0188747003512554 2 {[TV]|[{I|L}S]}[DN]VQ[{I|L}P][Y{I|L}] 10 0 + 49.441 0.0 0.0 4.2599 4.2599 71.69 0.0 0.0 0.0 0.6986246702928867 31.280221703767307 0.6986246702928867 2.04119982655925 0 0.9247425010840048 1.3010299956639813 1.1307196863200843 1.274227503252014 + + {[TV]|[{I|L}S]}[DN]VQ[{I|L}P][Y{I|L}];[DN]VTVQ[{I|L}P][Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{I|L}P]Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}Y;[DN]VTV[AG][{I|L}P][Y{I|L}];[AG]{[CP]|[EA]}TVQ[{I|L}P][Y{I|L}];[DN]VQ{[TV]|[{I|L}S]}[{I|L}P][Y{I|L}];[{I|L}P]{I|L}EE{[RE]|[WV]}[Y{I|L}];[DN]V[RP]{[RE]|[WV]}[Y{I|L}];[DN]VQ[{I|L}V][TP][Y{I|L}] 4.2599;4.084;3.8709;3.2944;2.4593;1.7354;1.6887;0.26429;0.15665 +;-;-;-;-;-;-;-;- + 263 1 1.995 45009.7 1.0 4879 3608 8482 DOHH2_400M_050219_2,8489 DOHH2_400M_050219_2,8489,TVDNVQPLLY True True TVDNVQPLLY 48.274139 581.310778796673 817599.125 8482.0 ENSG00000145332|ENST00000273963|KLHL8 7.654924233754476 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8490 48.282 446.0 129440.0 25 0 21494.0 + 33758 SLAQFEQKW 9 96 568.7904672119287 1135.5663814906572 2 568.7906371951103 MULTI CID FTMS 0 0 0 8482 96880.3046875 0.6557986507998878 -1 0.08428955078125 8 Unmodified _SLAQFEQKW_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 69.10491478415734 0.0214449631113747 2 {[TV]|[{I|L}S]}AQ{M(Oxidation (M))|F}EQKW 9 0 + 86.511 0.0 0.0 7.6183 7.6183 91.791 0.0 0.0 0.0 65.99895739657265 11.706962271689749 11.706962271689749 9.208187539523747 0 0.805462187404089 2.0 0.805462187404089 1.1861818737241734 + + {[TV]|[{I|L}S]}AQ{M(Oxidation (M))|F}EQKW;{[TV]|[{I|L}S]}A[AG]{M(Oxidation (M))|F}EQKW;{[TV]|[{I|L}S]}AQ{M(Oxidation (M))|F}E[AG]KW;{[TV]|[{I|L}S]}A[AG]{M(Oxidation (M))|F}E[AG]KW;{[TV]|[{I|L}S]}AQ{M(Oxidation (M))|F}[KG]{[CP]|[EA]}W;{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{M(Oxidation (M))|F}Q[RP];{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AEQKW;{[TV]|[{I|L}S]}AQ[{I|L}T][CS]KW;{[TV]|[{I|L}S]}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q[RP];{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AE[AG]KW 7.6183;6.8074;6.8074;6.0004;5.5062;5.086;5.0275;4.9368;4.8872;4.2167 +;-;-;-;-;-;-;-;-;- + 773 + 1 1.995 45333.4 1.0 4880 3608 8482 DOHH2_400M_050219_2,8490 DOHH2_400M_050219_2,8490,SLAQFEQKW True True SLAQFEQKW 48.282076 568.79063719511 985545.1875 8482.0 ENST00000394768.6_2_14:64542710-64692241:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2;;nc|ENSG00000054654|Q8WXH0-7|SYNE2 8.420267581939697 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8491 48.297 800.0 95004.0 25 0 8316.3 + + -1 AEIPEGYVPEHW 12 79 713.8359692126483 1425.6573854920964 2 713.8328124880791 MULTI CID FTMS 0 0 0 8482 92984.328125 0.7782616795382007 2 -0.1284294128417968 9 Oxidation (M) _ATYSKM(Oxidation (M))IHHHW_ nc|ENSG00000136521|O43674-2|NDUFB5;ENST00000488002.5_1_3:179322588-179334847:+|nuORF;ENSG00000136521|ENST00000259037|NDUFB5;ENST00000359944.10_1_3:179322640-179341825:+|nuORF 6.2057823575117 0.8458686499021061 2 [EP]GYVH{M(Oxidation (M))|F}GEP 10 -1 53.327 0.0 0.0 3.7405 0.0 0.0 0.0 310.1428662801672 310.1428662801672 34.38670047696206 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 [EP]GYVH{M(Oxidation (M))|F}GEP 3.7405 - 1022 1 1.995 61784.3 0.3899999856948852 4881 3608 8482 DOHH2_400M_050219_2,8491 DOHH2_400M_050219_2,8491,ATYSKMIHHHW False False AEIPEGYVPEHW 48.297082 713.832812488079 4074121.25 8482.0 nc|ENSG00000136521|O43674-2|NDUFB5;;ENST00000488002.5_1_3:179322588-179334847:+|nuORF;;ENSG00000136521|ENST00000259037|NDUFB5;;ENST00000359944.10_1_3:179322640-179341825:+|nuORF 8.307444413503012 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8493 48.315 800.0 175080.0 25 0 7342.7 + 35143 SREGRPIWQL 10 132 414.5632792493934 1240.6680083483802 3 414.5629455447197 MULTI CID FTMS 0 0 0 8492 132103.625 0.3117909305640324 2 -0.1071090698242187 1 Unmodified _SREGRPIWQL_ ENSG00000113161|ENST00000287936|HMGCR;ENST00000504466.1_1_5:74645886-74647190:+|nuORF;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 20.871137199558856 0.4973446006067743 2 [{I|L}P]K[C(Carbamidomethyl (C))S][{I|L}P]WQ{I|L} 10 5 + 32.457 0.0 0.0 2.6161 2.6161 70.179 0.0 0.0 0.0 4.217363645126181 5.568109453757657 4.217363645126181 4.217363645126181 0 0.3807196863200844 0.8239087409443188 0.0 1.1237125054200234 [{I|L}P]K[C(Carbamidomethyl (C))S][{I|L}P]WQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[WR][{I|L}P]WQ{I|L};[{I|L}P]K[C(Carbamidomethyl (C))S][{I|L}P]W{I|L}Q;{[QN]|[E{I|L}]|[KN]}G[KP][RD]WQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[WR][{I|L}P]W{I|L}K;[{I|L}P]K{[QD]|[EN]|[WG]|[KD]|[RS]}[DV]WQ{I|L};{[QN]|[E{I|L}]|[KN]}G[KP][RD]W{I|L}Q;[{I|L}P]K{[QD]|[EN]|[WG]|[KD]|[RS]}W[DV]Q{I|L};[{I|L}P]K{[QD]|[EN]|[WG]|[KD]|[RS]}[DV]W{I|L}Q;[{I|L}P]K{[QD]|[EN]|[WG]|[KD]|[RS]}W[DV]{I|L}Q 2.6161;2.2762;2.1673;2.0009;1.8274;1.7885;1.5521;1.5458;1.3397;1.097 -;-;-;-;-;-;-;-;-;- 185 1 1.995 113528.1 0.8199999928474426 4882 3609 8492 DOHH2_400M_050219_2,8493 DOHH2_400M_050219_2,8493,SREGRPIWQL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8494 48.316 60.0 856200.0 25 0 93092.0 + 32822 SEFTGVWKY 9 81 558.7709676896873 1115.5273824461744 2 558.7713500857353 MULTI CID FTMS 0 0 0 8492 566156.375 0.8621399625411523 -1 0.0879325866699218 2 Unmodified _SEFTGVWKY_ ENSG00000249915|ENST00000264933|PDCD6;ENST00000505526.1_1_5:271863-311637:+|nuORF;nc|ENSG00000249915|O75340-2|PDCD6 21.53697664764585 0.2571576504437394 2 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TRWKY 8 2 + 43.141 0.0 0.0 3.8673 3.8673 79.96 0.0 0.0 0.0 28.43617237268305 11.8943306386236 11.8943306386236 9.262137858390808 0 0.8807196863200843 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TRWKY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T[VG]WKY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TR[YK]W;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{[ET]|[MV]};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TAA{[CP]|[EA]}KY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T[VG][YK]W;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TR{[DS]|[MA]|[CV]|TT}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}[VS]{[MS]|[{M(Oxidation (M))|F}A]}WKY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T[VG]{[DS]|[MA]|[CV]|TT}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TAA{[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.8673;3.037;2.7262;2.0789;1.9417;1.8959;1.809;1.4426;0.98355;0.71369 -;+;-;-;-;-;-;-;-;- + 186 + 1 1.995 45295.9 1.0 4883 3609 8492 DOHH2_400M_050219_2,8494 DOHH2_400M_050219_2,8494,SEFTGVWKY False True SEFTGVWKY 48.316269 558.771350085735 8533411.0 8492.0 ENSG00000249915|ENST00000264933|PDCD6;;nc|ENSG00000249915|O75340-2|PDCD6;;ENST00000505526.1_1_5:271863-311637:+|nuORF 7.082882086435954 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8495 48.33 800.0 179680.0 25 0 14453.0 -1 0 121 1035.1617873173575 3102.463532552273 3 1035.831103503704 MULTI CID FTMS 0 0 0 8492 248791.859375 0.4927665865890636 -3 0.2711639404296875 3 2 N{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}P]PDM{[QD]|[EN]|[WG]|[KD]|[RS]} 10 -1 37.197 0.0 0.0 1.1989 0.0 0.0 1912.9493885724623 0.0 1912.9493885724623 0.0 14.978109286651248 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.8494850021680094 N{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}P]PDM{[QD]|[EN]|[WG]|[KD]|[RS]} 1.1989 - 1699 1 1.995 104970.0 0.6600000262260437 4884 3609 8492 DOHH2_400M_050219_2,8495 DOHH2_400M_050219_2,8495, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8496 48.338 417.0 237170.0 25 0 30758.0 + 15799 ISESHPILY 9 101 529.7792939974225 1057.544035061645 2 529.7789184451103 MULTI CID FTMS 0 0 0 8492 109247.421875 0.1788172789035337 -9 0.53515625 4 Unmodified _ISESHPILY_ ENSG00000019102|ENST00000326621|VSIG2;nc|ENSG00000019102|Q96IQ7-2|VSIG2 21.74664581756881 0.2544899275067181 2 {NN|[MP]|[D{I|L}]|[EV]}HTSP{I|L}{I|L}Y 9 4 + 46.672 0.0 0.0 4.4133 4.4133 78.205 0.0 0.0 0.0 7.112044607530301 11.0827208845118 7.112044607530301 7.112044607530301 0 0.8935078169319297 1.3010299956639813 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}HTSP{I|L}{I|L}Y;{[QN]|[E{I|L}]|[KN]}[HS]SP{I|L}{I|L}Y;[{I|L}T][HD]SP{I|L}{I|L}Y;[H{I|L}]DTSP{I|L}{I|L}Y;[{I|L}T][YC(Carbamidomethyl (C))]{I|L}{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}H[DG]{I|L}{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}H{[RE]|[WV]}{I|L}{I|L}Y;[NP][DN]{I|L}P{I|L}{I|L}Y;{[CT]|[{M(Oxidation (M))|F}G]}[YV]SP{I|L}{I|L}Y;[PG][NP]TSP{I|L}{I|L}Y 4.4133;3.7408;3.5743;3.2463;2.5547;2.5179;2.4746;2.3365;2.1342;1.8812 -;-;-;-;-;-;-;-;-;- 284 1 1.995 81205.3 1.0 4885 3609 8492 DOHH2_400M_050219_2,8496 DOHH2_400M_050219_2,8496,ISESHPILY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8498 48.354 800.0 70614.0 25 0 4988.9 -1 0 70 1016.1417724116544 3045.403487835163 3 1016.478076159954 MULTI CID FTMS 0 0 0 8497 99569.078125 0.4302253585160123 3 -0.0879859924316406 1 2 D 1 -1 10.485 0.0 0.0 0.34427 0.0 0.0 2328.095029438482 599.2437672718012 2927.338796710283 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 D 0.34427 - 43 + 1 1.995 46244.2 0.4000000059604645 4886 3610 8497 DOHH2_400M_050219_2,8498 DOHH2_400M_050219_2,8498, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8499 48.36 311.0 276510.0 25 0 35824.0 + + 19639 ISDRLIGIY 9 91 525.303828949356 1048.593104965512 2 525.3035156130791 MULTI CID FTMS 0 0 0 8497 216948.359375 0.8241233473545208 -3 0.2127189636230468 2 Unmodified _LGFLGPLGIY_ ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4 40.44857923139169 0.1528301697436547 2 {[TV]|[{I|L}S]}[RD]{I|L}{I|L}G{I|L}Y 9 -1 + 52.826 0.0 0.0 5.0378 5.0378 79.474 0.0 0.0 0.0 7.87787469514015 21.043031117331942 7.87787469514015 6.020599913279625 0 1.3494850021680094 1.0 0.0 0.0 {[TV]|[{I|L}S]}[RD]{I|L}{I|L}G{I|L}Y;{[TV]|[{I|L}S]}[RD]{I|L}G{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RR[TP]{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RR{I|L}[TP]Y 5.0378;4.4637;3.4202;2.4883 -;-;-;- 77 1 1.995 71964.9 1.0 4887 3610 8497 DOHH2_400M_050219_2,8499 DOHH2_400M_050219_2,8499,LGFLGPLGIY False False ISDRLIGIY 48.359661 525.303515613079 1784873.125 8497.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 5.11362091700236 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8500 48.367 434.0 213330.0 25 0 14381.0 -1 0 97 974.9615473026256 1947.9085416720511 2 974.9632446169852 MULTI CID FTMS 0 0 0 8497 203112.171875 0.4961310402998347 -5 0.3734817504882812 3 2 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YN]{M(Oxidation (M))|F}YQ{[TV]|[{I|L}S]} 16 -1 + 62.539 0.0 0.0 3.2106 3.2106 71.56 0.0 0.0 0.0 35.88344732164998 0.4060751224076853 0.4060751224076853 4.549951869379839 0 2.2302046884880937 0.0 0.5 1.1237125054200234 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YN]{M(Oxidation (M))|F}YQ{[TV]|[{I|L}S]};[NP]{I|L}NA{M(Oxidation (M))|F}[YN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNA{M(Oxidation (M))|F}[YN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA{M(Oxidation (M))|F}[YN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YKSW{[MG]|[TS]};[NP]{I|L}NA{M(Oxidation (M))|F}[YN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YKSN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}NA{M(Oxidation (M))|F}[YN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YQSN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QV]|[N{I|L}]|[RA]|[KV]}PNA{M(Oxidation (M))|F}[YN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YKSW{[MG]|[TS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNA{M(Oxidation (M))|F}[YN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YQSW{[MG]|[TS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNA{M(Oxidation (M))|F}[YN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YKSN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QV]|[N{I|L}]|[RA]|[KV]}PNA{M(Oxidation (M))|F}[YN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YQSN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.2106;2.977;2.7514;1.8469;1.6924;1.6924;1.6214;1.6214;1.4668;1.4668 -;-;-;-;-;-;-;-;-;- 1214 + 1 1.995 67519.6 1.0 4888 3610 8497 DOHH2_400M_050219_2,8500 DOHH2_400M_050219_2,8500, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8501 48.381 800.0 87036.0 25 0 22049.0 + 18842 LASPHSPIL 9 99 467.77174785126 933.52894276932 2 467.7714416384697 MULTI CID FTMS 0 0 0 8497 102028.9140625 0.9109753064933588 -1 0.040496826171875 4 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 36.04419817259434 0.0971720506436186 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}A[PS]{I|L}{I|L} 9 3 + 53.368 0.0 0.0 5.7167 5.7167 89.315 0.0 0.0 0.0 9.76203644159419 46.377809162905024 9.76203644159419 16.144517969153142 0 0.8494850021680094 0.0 1.7302046884880935 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}A[PS]{I|L}{I|L};[{I|L}A][PS]H[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[TA][VP]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[VP][TA]H[PS]{I|L}{I|L};[R{M(Oxidation (M))|F}][{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[{I|L}A][W{M(Oxidation (M))|F}][TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP]{I|L}{I|L};[VP][HT]A[PS]{I|L}{I|L} 5.7167;3.9873;3.8491;3.4823;3.1736;2.8817;2.638;2.6008;2.3805;2.3706 -;+;-;-;-;-;-;-;-;- + 282 1 1.995 58650.2 0.8999999761581421 4889 3610 8497 DOHH2_400M_050219_2,8501 DOHH2_400M_050219_2,8501,LASPHSPIL True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8502 48.395 800.0 63282.0 25 0 8291.2 + 17650 KPTARRRGAPW 11 83 648.3749805068111 1294.735408080422 2 648.3746215701103 MULTI CID FTMS 0 0 0 8497 95450.09375 0.897701867548105 -3 0.2127189636230468 5 Unmodified _KPTARRRGAPW_ REV__ENST00000204961.4_1_X:68049045-68049573:+|nuORF 2.9952420565917617 0.861016188266951 2 Y 1 -1 13.099 0.0 0.0 1.0117 0.0 0.0 1113.6610500255376 0.0 1113.6610500255376 0.0 1.6789605096159654 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0117 - 12 + 1 1.995 47269.6 0.4199999868869781 4890 3610 8497 DOHH2_400M_050219_2,8502 DOHH2_400M_050219_2,8502,KPTARRRGAPW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8503 48.404 515.0 237990.0 25 0 29435.0 + 14765 ILDKESLLY 9 134 547.3104951225896 1092.606437311979 2 547.3101074099541 MULTI CID FTMS 0 0 0 8497 87814.859375 0.1771496851926637 -5 0.3734817504882812 6 Unmodified _ILDKESLLY_ REV__ENSG00000101194|ENST00000370351|SLC17A9;REV__nc|ENSG00000101194|Q9BYT1-2|SLC17A9 42.312485326615175 0.0627620958981271 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}KES{I|L}{I|L}Y 9 -1 + 73.828 0.0 0.0 6.757 6.757 80.546 0.0 0.0 0.0 4.191293077419758 16.478174818886373 4.191293077419758 1.7609125905568137 0 1.0 1.2218487496163564 1.079689690656103 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}KES{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}ES{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}KE{I|L}S{I|L}{I|L}Y;{I|L}{I|L}DKES{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}KES{I|L}{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}{I|L}KETV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}{I|L}KTD{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}ES{I|L}Y;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}VES{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}ETV{I|L}Y 6.757;6.5958;6.4569;6.3734;6.2982;6.1616;6.1004;6.0473;6.0324;6.0005 -;-;-;+;-;-;-;-;-;- + 5455 1 1.995 96732.2 1.0 4891 3610 8497 DOHH2_400M_050219_2,8503 DOHH2_400M_050219_2,8503,ILDKESLLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8505 48.409 38.0 1192300.0 25 0 242590.0 + 33576 SINDKIIEL 9 60 522.8002082632157 1043.5858635932314 2 522.8005248904228 MULTI CID FTMS 0 0 0 8504 1324361.75 0.5888698865212199 2 -0.0213737487792968 1 Unmodified _SINDKIIEL_ ENSG00000072310|ENST00000261646|SREBF1;ENSG00000198911|ENST00000361204|SREBF2;ENST00000470247.1_1_17:17721556-17722545:-|nuORF;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1;nc|ENSG00000198911|Q12772-2|SREBF2 32.78568957990786 0.1150597335874693 2 {[TV]|[{I|L}S]}[VG]N{I|L}S{I|L}E{I|L} 10 4 + 64.939 0.0 0.0 6.2227 6.2227 82.627 0.0 0.0 0.0 20.79181246047625 49.45432175029467 20.79181246047625 4.771212547196626 0 1.1549471895720984 2.0 0.8494850021680094 0.0 {[TV]|[{I|L}S]}[VG]N{I|L}S{I|L}E{I|L};{[TV]|[{I|L}S]}[VG]NS{I|L}{I|L}E{I|L};{[TV]|[{I|L}S]}[VG]GG{I|L}S{I|L}E{I|L};{[TV]|[{I|L}S]}[VG]GGS{I|L}{I|L}E{I|L};{[TV]|[{I|L}S]}[VG][KA]D{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[WK][QP]{I|L} 6.2227;5.7655;5.3445;4.8873;3.7305;1.5036 -;-;-;-;-;- 161 1 1.995 43202.9 1.0 4892 3611 8504 DOHH2_400M_050219_2,8505 DOHH2_400M_050219_2,8505,SINDKIIEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8506 48.412 111.0 298470.0 25 0 87349.0 + 17900 KQQRLHLHIH 10 50 655.3826799068972 1308.7508068805944 2 655.3823730349541 MULTI CID FTMS 0 0 0 8504 598475.0 0.866697983503449 -4 0.2793312072753906 2 Unmodified _KQQRLHLHIH_ REV__ENSG00000088538|ENST00000266037|DOCK3 0.4583401331227399 0.7245164002484112 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 39649.1 1.0 4893 3611 8504 DOHH2_400M_050219_2,8506 DOHH2_400M_050219_2,8506,KQQRLHLHIH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8508 48.416 67.0 614060.0 25 0 77474.0 + 6923 EEFQKELSQW 10 69 662.3146918531729 1322.6148307731455 2 662.3144409060478 MULTI CID FTMS 0 0 0 8507 782918.75 0.5227963358390207 3 -0.0694847106933593 1 Unmodified _EEFQKELSQW_ ENSG00000100109|ENST00000407690|TFIP11 37.77132515983256 0.1811013699114492 2 EE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{M(Oxidation (M))|F}{I|L} 7 5 40.01 0.0 0.0 3.025 0.0 0.0 0.0 416.1555161581645 416.1555161581645 6.856281995293401 0.0 0.0 0.0 0 0.5 1.3010299956639813 1.1549471895720984 0.5 EE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{M(Oxidation (M))|F}{I|L} 3.025 - 569 1 1.995 37404.0 1.0 4894 3612 8507 DOHH2_400M_050219_2,8508 DOHH2_400M_050219_2,8508,EEFQKELSQW False True EEFQKELSQW 48.416344 662.314440906048 19697534.0 8507.0 ENSG00000100109|ENST00000407690|TFIP11 8.815629005432129 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8509 48.421 273.0 239910.0 25 0 35381.0 + 44048 YILPKNVL 8 80 480.3000175615829 958.585482189966 2 480.2997314333916 MULTI CID FTMS 0 0 0 8507 227970.5 0.6427249425318446 -3 0.1144752502441406 2 Unmodified _YILPKNVL_ ENSG00000174231|ENST00000304992|PRPF8;ENST00000575116.1_1_17:1555319-1557183:-|nuORF;ENST00000576585.1_1_17:1556769-1557303:-|nuORF 38.15118350030904 0.2652218139009398 2 [Y{I|L}]{I|L}PKNV{I|L} 8 0 + 47.942 0.0 0.0 5.0013 5.0013 88.447 0.0 0.0 0.0 25.23870814833116 5.093728280886936 5.093728280886936 34.55997595158257 0 1.0317183090963749 2.0 0.0 0.0 + + [Y{I|L}]{I|L}PKNV{I|L};[{I|L}P]KN[Y{I|L}]V{I|L};[KP]N{I|L}[Y{I|L}]V{I|L};[KP]{I|L}N[Y{I|L}]V{I|L};[{I|L}P]KGG[Y{I|L}]V{I|L};[KP]GG{I|L}[Y{I|L}]V{I|L} 5.0013;1.396;1.003;0.68893;0.42976;0.036734 +;-;-;-;-;- + 235 + 1 1.995 55798.8 1.0 4895 3612 8507 DOHH2_400M_050219_2,8509 DOHH2_400M_050219_2,8509,YILPKNVL False True YILPKNVL 48.421373 480.299731433392 4159801.0 8507.0 ENST00000576585.1_1_17:1556769-1557303:-|nuORF;;ENSG00000174231|ENST00000304992|PRPF8;;ENST00000575116.1_1_17:1555319-1557183:-|nuORF 1.0243597030639648 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8510 48.426 222.0 230290.0 25 0 43513.0 + 34033 SLKLSQRSL 9 70 516.3140591963595 1030.613565459519 2 516.3141357302666 MULTI CID FTMS 0 0 0 8507 256932.6875 0.3556743273770538 -6 0.3856391906738281 3 Unmodified _SLKLSQRSL_ REV__ENST00000351989.7_1_22:20067867-20073284:+|nuORF 2.059750862983233 0.8427793054688888 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.995 47711.6 1.0 4896 3612 8507 DOHH2_400M_050219_2,8510 DOHH2_400M_050219_2,8510,SLKLSQRSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8512 48.432 222.0 198230.0 25 0 21360.0 + 11132 GEIDTRFSF 9 59 536.2586225194893 1070.5026921057786 2 536.2585937380791 MULTI CID FTMS 0 0 0 8511 215296.78125 0.9152055297859378 -2 0.0213737487792968 1 Unmodified _GEIDTRFSF_ ENSG00000137955|ENST00000319942|RABGGTB 29.84058131909904 0.1515068451768857 2 {[DA]|[EG]}{I|L}DT 5 4 47.888 0.0 0.0 4.4734 0.0 0.0 0.0 552.2587374322874 552.2587374322874 34.78855930516417 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + {[DA]|[EG]}{I|L}DT 4.4734 + + 23 + 1 1.995 40876.7 1.0 4897 3613 8511 DOHH2_400M_050219_2,8512 DOHH2_400M_050219_2,8512,GEIDTRFSF False True GEIDTRFSF 48.432302 536.258593738079 1588261.75 8511.0 ENSG00000137955|ENST00000319942|RABGGTB 5.167595545450847 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8513 48.442 559.0 121810.0 25 0 11345.0 + 35243 SSEELLSLKY 10 109 584.8086528385337 1167.6027527438673 2 584.8085204958916 MULTI CID FTMS 0 0 0 8511 103244.296875 0.2797890609306515 4 -0.1214103698730468 2 Unmodified _SSEELLSLKY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 80.6760300276096 0.0165137828474802 2 {[CA]|SS}EE{I|L}{I|L}S{I|L}KY 10 0 + 72.216 0.0 0.0 6.185 6.185 93.624 0.0 0.0 0.0 45.83613437787733 14.146518864155126 14.146518864155126 66.92179256180064 0 1.610924374808178 0.0 0.0 0.2742275032520141 + + {[CA]|SS}EE{I|L}{I|L}S{I|L}KY;{[QV]|[N{I|L}]|[RA]|[KV]}{[WN]|[YH]}{I|L}[WH]W 6.185;0.45346 +;- + 274 + 1 1.995 52493.8 1.0 4898 3613 8511 DOHH2_400M_050219_2,8513 DOHH2_400M_050219_2,8513,SSEELLSLKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8514 48.456 800.0 54538.0 25 0 5856.5 25794 NKLILYKFDR 10 79 437.2572770697585 1308.7500018094756 3 437.2568847537041 MULTI CID FTMS 0 0 0 8511 86414.640625 0.7979881397001601 -5 0.2164154052734375 3 Unmodified _NKLILYKFDR_ ENSG00000081985|ENST00000674203|IL12RB2;nc|ENSG00000081985|Q99665-2|IL12RB2;nc|ENSG00000081985|Q99665-3|IL12RB2 1.4819007175156935 0.719781833666733 2 Y 1 9 10.485 0.0 0.0 0.80111 0.0 0.0 1127.6756437545912 0.0 1127.6756437545912 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.80111 + + 2 + 1 1.995 45336.6 0.3600000143051147 4899 3613 8511 DOHH2_400M_050219_2,8514 DOHH2_400M_050219_2,8514,NKLILYKFDR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8516 48.462 154.0 310800.0 25 0 47194.0 + 7424 EGLPKPLTL 9 65 484.2948339440627 966.5751149549254 2 484.2946655154228 MULTI CID FTMS 0 0 0 8515 369237.40625 0.9084134827735756 3 -0.0910224914550781 1 Unmodified _EGLPKPLTL_ ENSG00000206503|ENST00000376809|HLA-A;ENSG00000234745|ENST00000412585|HLA-B;ENST00000495183.5_1_6:29910749-29913287:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;nc|ENSG00000206503|P04439-2|HLA-A 37.97399986684836 0.0865783450051559 2 {[DA]|[EG]}{I|L}PK[{I|L}P]T{I|L} 9 0 {[DA]|[EG]}{I|L} + + 30.327 14.181 4.7405 3.1376 3.1376 49.123 0.0 0.0 0.0 0.0 6.554760441027536 0.0 0.0 0 0.0 0.0 1.0941876774005248 0.0 + + {[DA]|[EG]}{I|L}PK[{I|L}P]T{I|L} 3.1376 + + 111 + 1 1.995 40619.6 1.0 4900 3614 8515 DOHH2_400M_050219_2,8516 DOHH2_400M_050219_2,8516,EGLPKPLTL True True EGLPKPLTL 48.461541 484.294665515423 7617888.5 8515.0 ENSG00000234745|ENST00000412585|HLA-B;;ENSG00000206503|ENST00000376809|HLA-A;;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;;chr6:29928328-30009145|17|27.82|0.56|5.62|+|2|HLA-K,HLA-J|1;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;;chr6:30546058-31355317|14|15.71|0.03|9.1|-|2|None,HLA-B|1;;ENST00000495183.5_1_6:29910749-29913287:+|nuORF;;chr6:31354526-31355317|14|59.0|0.97|5.92|-|2|HLA-B,HLA-B|1 6.3771897951761884 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8517 48.467 309.0 128720.0 25 0 34594.0 + 42056 VQVLKRDLEAR 11 59 663.8960027242318 1325.7774525152636 2 663.8952514529228 MULTI CID FTMS 0 0 0 8515 183330.9375 0.6244889812624245 -1 0.0303878784179687 2 Unmodified _VQVLKRDLEAR_ REV__ENSG00000124074|ENST00000243878|ENKD1;REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1 1.0714618166137932 0.8700927088084459 2 W 1 -1 11.594 0.0 0.0 0.87449 0.0 0.0 1121.6869201439729 0.0 1121.6869201439729 0.0 11.593793813122062 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.87449 - 8 + 1 1.995 42469.5 1.0 4901 3614 8515 DOHH2_400M_050219_2,8517 DOHH2_400M_050219_2,8517,VQVLKRDLEAR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8518 48.481 800.0 130320.0 25 0 20084.0 + 30496 REFGSVDYW 9 88 579.7642170079904 1157.5138810827807 2 579.7642700076103 MULTI CID FTMS 0 0 0 8515 123949.6015625 0.9914583801236752 -1 0.0303878784179687 3 Unmodified _REFGSVDYW_ ENSG00000010165|ENST00000361735|METTL13;nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13 36.506200033944 0.094635877243972 2 GSVDYW 6 3 52.938 0.0 0.0 4.5734 0.0 0.0 432.2133961408219 0.0 432.2133961408219 0.0 39.44328470624591 0.0 0.0 0 0.9247425010840048 0.0 0.7059771852360797 0.0 + GSVDYW 4.5734 + + 144 1 1.995 81118.9 0.4799999892711639 4902 3614 8515 DOHH2_400M_050219_2,8518 DOHH2_400M_050219_2,8518,REFGSVDYW True True REFGSVDYW 48.481029 579.76427000761 866257.3125 8515.0 ENSG00000010165|ENST00000361735|METTL13;;nc|ENSG00000010165|Q8N6R0-4|METTL13;;nc|ENSG00000010165|Q8N6R0-1|METTL13 5.490062554677327 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8520 48.497 676.0 137790.0 25 0 9852.6 + 7333 EFFEILEL 8 125 520.2693651478497 1038.5241773624994 2 520.2710449099541 MULTI CID FTMS 0 0 0 8519 74922.328125 0.2254170236727342 6 -0.1940727233886718 1 Unmodified _EFFEILEL_ REV__ENSG00000079277|ENST00000371945|MKNK1;REV__ENSG00000099875|ENST00000250896|MKNK2;REV__ENST00000486716.5_2_1:47040607-47059818:-|nuORF;REV__ENST00000531355.5_1_1:47027303-47048968:-|nuORF;REV__ENST00000585667.1_1_19:2042756-2043527:-|nuORF;REV__nc|ENSG00000079277|Q9BUB5-2|MKNK1;REV__nc|ENSG00000079277|Q9BUB5-3|MKNK1;REV__nc|ENSG00000079277|Q9BUB5|MKNK1;REV__nc|ENSG00000099875|Q9HBH9-2|MKNK2 46.92087301778293 0.1537303740847981 2 [{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}V{M(Oxidation (M))|F}E{I|L} 8 -1 + 41.526 0.0 0.0 3.9985 3.9985 72.985 0.0 0.0 0.0 0.6694678963061307 16.749836445409706 0.6694678963061307 3.6082400477607934 0 0.6203715150305281 0.0 1.5356668758921828 0.0 [{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}V{M(Oxidation (M))|F}E{I|L};{[ES]|[DT]|[{I|L}C]}{[WT]|[RM]}K{M(Oxidation (M))|F}E{I|L};[{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}VE{M(Oxidation (M))|F}{I|L};{[MG]|[TS]}[QP]TV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[MG]|[TS]}[PA]GTV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[ES]|[DT]|[{I|L}C]}{[WT]|[RM]}KE{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}[KC]{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}T]HH[KQ]E{I|L};[DP]{M(Oxidation (M))|F}VA[KC]{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}D[Q{I|L}]{M(Oxidation (M))|F}{I|L} 3.9985;3.6511;3.0689;2.9863;2.866;2.7215;2.2878;2.1765;2.0064;2.0002 -;-;-;-;-;-;-;-;-;- 553 1 1.995 72414.4 1.0 4903 3615 8519 DOHH2_400M_050219_2,8520 DOHH2_400M_050219_2,8520,EFFEILEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8521 48.511 800.0 107430.0 25 0 13537.0 + 6757 EDTLRKKHTLL 11 94 677.3960592164915 1352.777565499783 2 677.3987914919853 MULTI CID FTMS 0 0 0 8519 100454.21875 0.3912756164364886 12 -0.3468360900878906 2 Unmodified _EDTLRKKHTLL_ REV__ENSG00000111199|ENST00000261740|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-2|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-3|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-4|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-5|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-6|TRPV4 9.38312468134398 0.8308777417566128 2 D{I|L}{I|L}D{I|L}WWY 8 -1 32.695 0.0 0.0 2.4169 0.0 0.0 230.22115060790708 0.0 230.22115060790708 0.0 1.7089605114941977 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L}{I|L}D{I|L}WWY 2.4169 - 324 + 1 1.995 72016.7 0.4600000083446502 4904 3615 8519 DOHH2_400M_050219_2,8521 DOHH2_400M_050219_2,8521,EDTLRKKHTLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8523 48.527 800.0 84508.0 25 0 6435.5 + 35249 SSENPWMTEY 10 103 622.2503380681054 1242.4861232030107 2 622.2510253787041 MULTI CID FTMS 0 0 0 8522 136953.46875 0.4589427639856762 6 -0.2153282165527343 1 Unmodified _SSENPWMTEY_ ENSG00000154429|ENST00000284617|CCSAP;ENST00000483092.1_1_1:229460984-229462796:-|nuORF;nc|ENSG00000154429|Q6IQ19-2|CCSAP 103.41943736471065 0.0068563894390004 2 {[CA]|SS}ENPWMT[YE] 10 0 + 44.407 0.0 0.0 3.574 3.574 68.19 0.0 0.0 0.0 1.0201301491248105 5.764837301042718 1.0201301491248105 1.0201301491248105 0 0.7887254899964358 0.0 1.4749073637206092 1.1549471895720984 + + {[CA]|SS}ENPWMT[YE];{[QD]|[EN]|[WG]|[KD]|[RS]}SSPWMT[YE];[WP]{[QC]|[C(Carbamidomethyl (C))A]}WMT[YE];{[ES]|[DT]|[{I|L}C]}SNPWMT[YE];{[ES]|[DT]|[{I|L}C]}NSPWMT[YE];[Y{M(Oxidation (M))|F}]TMW{[QC]|[C(Carbamidomethyl (C))A]}HQ;{[QD]|[EN]|[WG]|[KD]|[RS]}SSP{[DA]|[EG]}MT[YE];[Y{M(Oxidation (M))|F}]TMWW{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}SNP{[DA]|[EG]}MT[YE];{[ES]|[DT]|[{I|L}C]}NSP{[DA]|[EG]}MT[YE] 3.574;3.4919;3.4262;3.4023;3.2539;2.9924;2.7543;2.754;2.6647;2.5163 +;-;-;-;-;-;-;-;-;- + 591 1 1.995 56987.4 0.449999988079071 4905 3616 8522 DOHH2_400M_050219_2,8523 DOHH2_400M_050219_2,8523,SSENPWMTEY True True SSENPWMTEY 48.526887 622.251025378704 5300775.5 8522.0 ENSG00000154429|ENST00000284617|CCSAP;;ENST00000483092.1_1_1:229460984-229462796:-|nuORF;;nc|ENSG00000154429|Q6IQ19-2|CCSAP 7.297772566477458 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8524 48.533 346.0 166360.0 25 0 13470.0 + 25651 NFVKWKVRGK 10 87 421.2559857384115 1260.7461278154344 3 421.2561523318291 MULTI CID FTMS 0 0 0 8522 123093.671875 0.3863091234033355 -3 0.0849456787109375 2 Unmodified _NFVKWKVRGK_ REV__ENSG00000037637|ENST00000375592|FBXO42 10.073929032068715 0.6785112666868882 2 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 -1 + 81.191 0.0 0.0 6.4399 6.4399 88.06 0.0 0.0 0.0 66.0649218306807 13.521825181113629 13.521825181113629 9.164539485499262 0 0.3054621874040891 2.0 0.0 0.0 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR 6.4399;5.713 -;- 126 + 1 1.995 58106.7 1.0 4906 3616 8522 DOHH2_400M_050219_2,8524 DOHH2_400M_050219_2,8524,NFVKWKVRGK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8525 48.547 800.0 90172.0 25 0 15466.0 + + 6206 SEVEQYVKVW 10 101 633.3694777048854 1264.7244024765707 2 633.3699828982353 MULTI CID FTMS 0 0 0 8522 103944.765625 0.1088044340693834 18 -0.6579704284667969 3 Unmodified _DTHLRLLVLW_ ENSG00000197102|ENST00000360184|DYNC1H1 3.944395688203298 0.708391353636983 2 W 1 -1 12.218 0.0 0.0 0.9661 0.0 0.0 1060.6339311404363 0.0 1060.6339311404363 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.9661 + + 81 + 1 1.995 61734.0 0.449999988079071 4907 3616 8522 DOHH2_400M_050219_2,8525 DOHH2_400M_050219_2,8525,DTHLRLLVLW False False SEVEQYVKVW 48.546974 633.369982898235 309673.75 8522.0 ENSG00000197102|ENST00000360184|DYNC1H1 2.198516130447388 2.0 False 10.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8527 48.565 800.0 70160.0 25 0 4999.6 + 32589 SAVGHVFSL 9 91 458.7478793530835 915.481205772967 2 458.7477599978447 MULTI CID FTMS 0 0 0 8526 88908.0234375 1.0 0 0.0 1 Unmodified _SAVGHVFSL_ ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA 26.88365393820708 0.1891292719743517 2 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F} 3 7 27.447 0.0 0.0 2.9981 0.0 0.0 0.0 519.2699068658811 519.2699068658811 1.5321251377534395 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F} 2.9981 - 111 + 1 1.995 45273.8 0.3799999952316284 4908 3617 8526 DOHH2_400M_050219_2,8527 DOHH2_400M_050219_2,8527,SAVGHVFSL False True SAVGHVFSL 48.564656 458.747759997845 500633.34375 8526.0 nc|ENSG00000164944|Q69YN4-4|VIRMA;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA 4.237484693527222 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8528 48.568 162.0 334530.0 25 0 64467.0 20910 LMVVVIVLY 9 74 524.8271656079545 1047.639778282709 2 524.8274413943291 MULTI CID FTMS 0 0 0 8526 289920.34375 0.853031955007855 1 -0.0417404174804687 2 Unmodified _LMVVVIVLY_ ENSG00000103546|ENST00000568943|SLC6A2;nc|ENSG00000103546|P23975-2|SLC6A2;nc|ENSG00000103546|P23975-3|SLC6A2 5.230669730166228 0.7320841359114558 2 Y 1 8 14.604 0.0 0.0 1.394 0.0 0.0 866.5655422981371 0.0 866.5655422981371 0.0 4.515449934959719 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.394 + + 8 + 1 1.995 49625.8 1.0 4909 3617 8526 DOHH2_400M_050219_2,8528 DOHH2_400M_050219_2,8528,LMVVVIVLY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8529 48.575 391.0 264380.0 25 0 24124.0 + 8494 ETDLLDIRSEY 11 91 677.3306547347769 1352.6467565363537 2 677.3306152224541 MULTI CID FTMS 0 0 0 8526 148992.40625 0.3491954874436657 -3 0.0910224914550781 3 Unmodified _ETDLLDIRSEY_ ENSG00000122359|ENST00000422982|ANXA11;nc|ENSG00000122359|P50995-2|ANXA11 77.04852534044906 0.0119778990295177 2 {NN|[MP]|[D{I|L}]|[EV]}T[HS]{I|L}D{I|L}{I|L}D[DP] 12 7 + 60.191 0.0 0.0 4.4499 4.4499 76.164 0.0 0.0 0.0 9.785692913480515 23.776903016220103 9.785692913480515 5.025749891599531 0 1.1861818737241734 1.0969100130080565 0.3807196863200844 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}T[HS]{I|L}D{I|L}{I|L}D[DP];{NN|[MP]|[D{I|L}]|[EV]}TT[HV]D{I|L}{I|L}D[DP];{[ET]|[MV]}V[HS]{I|L}D{I|L}{I|L}D[DP];{NN|[MP]|[D{I|L}]|[EV]}R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}{I|L}D[DP];{[QN]|[E{I|L}]|[KN]}S[HS]{I|L}D{I|L}{I|L}D[DP];{[TV]|[{I|L}S]}E[HS]{I|L}D{I|L}{I|L}D[DP];{[ET]|[MV]}VT[HV]D{I|L}{I|L}D[DP];{NN|[MP]|[D{I|L}]|[EV]}{I|L}[YN]Y{I|L}{I|L}D[DP];{[ES]|[DT]|[{I|L}C]}{I|L}[HS]{I|L}D{I|L}{I|L}D[DP];{[TV]|[{I|L}S]}ET[HV]D{I|L}{I|L}D[DP] 4.4499;4.0783;3.5612;3.5179;3.4971;3.4363;3.4301;3.4099;3.3985;3.3052 -;-;-;-;-;-;-;-;-;- 930 1 1.995 84342.7 1.0 4910 3617 8526 DOHH2_400M_050219_2,8529 DOHH2_400M_050219_2,8529,ETDLLDIRSEY True True ETDLLDIRSEY 48.57488 677.330615222454 10391477.0 8526.0 ENSG00000122359|ENST00000422982|ANXA11;;nc|ENSG00000122359|P50995-2|ANXA11 5.727947235107422 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8530 48.589 800.0 77681.0 25 0 19650.0 + 12276 GRGRRRRQWGL 11 79 699.4091488600855 1396.8037447869708 2 699.4095336794853 MULTI CID FTMS 0 0 0 8526 93916.5 0.7060607940096869 -5 0.1354179382324218 4 Unmodified _GRGRRRRQWGL_ REV__ENST00000369754.7_2_6:82462234-82462363:-|nuORF;REV__ENST00000369756.3_2_6:82461889-82462327:-|nuORF 1.3295316138638542 0.8688751186870782 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.995 58363.4 0.4199999868869781 4911 3617 8526 DOHH2_400M_050219_2,8530 DOHH2_400M_050219_2,8530,GRGRRRRQWGL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8532 48.594 83.0 547520.0 25 0 71247.0 + + 5184 STDHIPILY 9 58 529.7792939974225 1057.544035061645 2 529.7797729372978 MULTI CID FTMS 0 0 0 8531 610944.4375 1.0 0 0.0 1 Unmodified _DIPSTHLLY_ ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1 16.942295170755138 0.3780752226737986 2 {NN|[MP]|[D{I|L}]|[EV]}H{[MG]|[TS]}P{I|L}{I|L}Y 9 -1 + 35.079 0.0 0.0 3.317 3.317 71.595 0.0 0.0 0.0 3.925449767853316 18.089315389975987 3.925449767853316 4.259687322722819 0 0.8935078169319297 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}H{[MG]|[TS]}P{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}K{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}H[DG]{I|L}{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}H{[RE]|[WV]}{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}H[KQ]AA{I|L}Y 3.317;2.9142;2.7477;2.7045;1.544 -;-;-;-;- 48 1 1.995 40808.9 1.0 4912 3618 8531 DOHH2_400M_050219_2,8532 DOHH2_400M_050219_2,8532,DIPSTHLLY False False STDHIPILY 48.593501 529.779772937298 5423572.5 8531.0 ENSG00000198380|ENST00000357308|GFPT1;;nc|ENSG00000198380|Q06210-2|GFPT1 7.333520412445068 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8533 48.607 800.0 97705.0 25 0 9632.2 -1 0 88 1035.1617873173575 3102.463532552273 3 1035.496630847454 MULTI CID FTMS 0 0 0 8531 195510.125 0.376233746443374 6 -0.1886558532714843 2 2 DVM{[QD]|[EN]|[WG]|[KD]|[RS]} 5 -1 26.95 0.0 0.0 0.86868 0.0 0.0 2496.171825246316 0.0 2496.171825246316 0.0 16.90614065464281 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 DVM{[QD]|[EN]|[WG]|[KD]|[RS]} 0.86868 - 253 1 1.995 61223.0 0.6399999856948853 4913 3618 8531 DOHH2_400M_050219_2,8533 DOHH2_400M_050219_2,8533, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8534 48.612 262.0 125720.0 25 0 7760.4 + 33049 SEPVGIYQGF 10 75 548.7692630058278 1095.5239730784556 2 548.7691528201103 MULTI CID FTMS 0 0 0 8531 142636.09375 1.0 0 0.0 3 Unmodified _SEPVGIYQGF_ ENSG00000163932|ENST00000330452|PRKCD;nc|ENSG00000163932|Q05655-2|PRKCD 27.22323531849824 0.3570408936368626 2 [VP]G{I|L}{[ES]|[DT]|[{I|L}C]}H 7 6 20.304 0.0 0.0 1.8534 0.0 0.0 0.0 373.12288600253686 373.12288600253686 7.104192878355738 0.0 0.0 0.0 0 0.4247425010840047 1.0 0.3494850021680094 0.0 [VP]G{I|L}{[ES]|[DT]|[{I|L}C]}H 1.8534 - 98 1 1.995 32937.4 1.0 4914 3618 8531 DOHH2_400M_050219_2,8534 DOHH2_400M_050219_2,8534,SEPVGIYQGF False True SEPVGIYQGF 48.612228 548.7695 1030675.3125 8531.0 ENSG00000163932|ENST00000330452|PRKCD;;nc|ENSG00000163932|Q05655-2|PRKCD 3.4631637732187905 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8535 48.625 739.0 129270.0 25 0 16093.0 + 25230 MVDPLLTKY 9 102 540.2927892428787 1078.571025552557 2 540.2935058474541 MULTI CID FTMS 0 0 0 8531 128502.5546875 1.0 0 0.0 4 Unmodified _MVDPLLTKY_ ENSG00000101452|ENST00000252011|DHX35;nc|ENSG00000101452|Q9H5Z1-2|DHX35 40.23920728925047 0.0741434193262949 2 MVDP{I|L}{I|L}TKY 9 0 + 88.414 0.0 0.0 8.1974 8.1974 96.352 0.0 0.0 0.0 51.55114945941853 12.587418566968154 12.587418566968154 20.784634594678263 0 0.7614393726401688 2.0 0.4247425010840047 0.0 + + MVDP{I|L}{I|L}TKY;MV[EP]V{I|L}TKY;MV[EP]{I|L}VTKY 8.1974;6.2703;5.7121 +;-;- + 631 + 1 1.995 78863.4 1.0 4915 3618 8531 DOHH2_400M_050219_2,8535 DOHH2_400M_050219_2,8535,MVDPLLTKY True True MVDPLLTKY 48.625051 540.293505847454 806224.625 8531.0 nc|ENSG00000101452|Q9H5Z1-2|DHX35;;ENSG00000101452|ENST00000252011|DHX35 8.26899798711141 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8536 48.631 309.0 136710.0 25 0 9517.1 + 32823 SEFTGVWKY 9 79 558.7709676896873 1115.5273824461744 2 558.7706786990166 MULTI CID FTMS 0 0 0 8531 112056.390625 0.1706388847355719 8 -0.2227706909179687 5 Unmodified _SEFTGVWKY_ ENSG00000249915|ENST00000264933|PDCD6;ENST00000505526.1_1_5:271863-311637:+|nuORF;nc|ENSG00000249915|O75340-2|PDCD6 27.628801355627647 0.1796483985696185 2 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TRWKY 8 2 + 40.556 0.0 0.0 3.6356 3.6356 79.296 0.0 0.0 0.0 26.57698754585809 11.638568026386691 11.638568026386691 9.262137858390812 0 0.8494850021680094 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TRWKY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T[VG]WKY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TR[YK]W;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TAA{[CP]|[EA]}KY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T[VG][YK]W;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TR{[DS]|[MA]|[CV]|TT}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}[VS]{[MS]|[{M(Oxidation (M))|F}A]}WKY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TAA{[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}T[VG]{[DS]|[MA]|[CV]|TT}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{[HG]|PP}[PG]R{[ET]|[MV]} 3.6356;2.8053;2.4534;2.4076;1.6231;1.5522;1.1714;1.1544;0.72671;0.075003 -;+;-;-;-;-;-;-;-;- + 177 + 1 1.995 40317.8 1.0 4916 3618 8531 DOHH2_400M_050219_2,8536 DOHH2_400M_050219_2,8536,SEFTGVWKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8538 48.642 391.0 331840.0 25 0 23201.0 -1 0 128 974.9615473026256 1947.9085416720511 2 974.9626342654228 MULTI CID FTMS 0 0 0 8537 236515.25 0.5777229200300751 4 -0.142608642578125 1 2 {[QV]|[N{I|L}]|[RA]|[KV]}[DG]M{I|L}[YK]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 17 -1 + 84.375 0.0 0.0 4.3316 4.3316 72.924 0.0 0.0 0.0 2.9333459353503457 6.39217310126719 2.9333459353503457 2.9333459353503457 0 1.8494850021680087 0.8860566476931632 0.6989700043360187 1.5044321917401078 {[QV]|[N{I|L}]|[RA]|[KV]}[DG]M{I|L}[YK]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}[YK]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}[PS]M{I|L}[YK]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}T[PS]M[YK]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}[DG]M{I|L}[YK]QDANN{I|L}P{[QD]|[EN]|[WG]|[KD]|[RS]};{[ES]|[DT]|[{I|L}C]}{I|L}[NS]{I|L}[YK]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}[DG]M{I|L}[YK]QWN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]S[PS]M[YK]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[KA]PCM{I|L}[YK]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}{I|L}[PS]M[YK]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.3316;4.181;4.1239;4.0806;4.0231;3.9996;3.9863;3.9663;3.9584;3.873 -;-;-;-;-;-;-;-;-;- 4874 1 1.995 87887.7 1.0 4917 3619 8537 DOHH2_400M_050219_2,8538 DOHH2_400M_050219_2,8538, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8540 48.648 189.0 196400.0 25 0 23131.0 33130 SETVSTKKTI 10 71 547.3104951225896 1092.606437311979 2 547.3101074099541 MULTI CID FTMS 0 0 0 8539 161010.859375 0.324808617287403 5 -0.1657981872558593 1 Unmodified _SETVSTKKTI_ ENSG00000133665|ENST00000256039|DYDC2 10.823927491677226 0.6659270209832991 2 {[TV]|[{I|L}S]}WW{I|L}{I|L}{I|L}Y 8 8 + 26.533 0.0 0.0 2.4284 2.4284 80.377 0.0 0.0 0.0 0.5634817240507317 10.334694271247358 0.5634817240507317 26.53258185413129 0 0.8935078169319297 0.638272163982407 0.0 0.0 {[TV]|[{I|L}S]}WW{I|L}{I|L}{I|L}Y 2.4284 - 97 1 1.995 33378.6 1.0 4918 3620 8539 DOHH2_400M_050219_2,8540 DOHH2_400M_050219_2,8540,SETVSTKKTI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8541 48.661 778.0 113200.0 25 0 17457.0 + 16675 KENPLQFKF 9 118 575.8168150089338 1149.6190770846674 2 575.8168823122978 MULTI CID FTMS 0 0 0 8539 138447.640625 1.0 0 0.0 2 Unmodified _KENPLQFKF_ ENSG00000092820|ENST00000367075|EZR;ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000137710|P35241-3|RDX;nc|ENSG00000137710|P35241-5|RDX 125.0377797344192 0.0019632425973841 2 [RH]{M(Oxidation (M))|F}Q{I|L}PNE 8 8 80.233 0.0 0.0 6.9791 0.0 0.0 0.0 125.0723360651 125.0723360651 38.23371551661548 0.0 0.0 0.0 0 3.004432191740108 0.0 1.4802046884880935 1.2302046884880935 [RH]{M(Oxidation (M))|F}Q{I|L}PNE 6.9791 - 1605 + 1 1.995 69371.4 1.0 4919 3620 8539 DOHH2_400M_050219_2,8541 DOHH2_400M_050219_2,8541,KENPLQFKF True True KENPLQFKF 48.661276 575.816882312298 910045.625 8539.0 nc|ENSG00000137710|P35241-5|RDX;;ENSG00000137710|ENST00000645495|RDX;;ENSG00000092820|ENST00000367075|EZR;;nc|ENSG00000137710|P35241-3|RDX 7.409359773000081 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8542 48.675 800.0 55282.0 25 0 5188.2 + 7101 EEMEWFNNY 9 80 639.2425674088007 1276.470581884401 2 639.2424804568291 MULTI CID FTMS 0 0 0 8539 86922.59375 1.0 0 0.0 3 Oxidation (M) _EEM(Oxidation (M))EWFNNY_ ENSG00000101003|ENST00000262460|GINS1 67.34385681178166 0.0221257235307089 2 [{M(Oxidation (M))|F}E]EEW{M(Oxidation (M))|F} 6 5 38.421 0.0 0.0 3.01 0.0 0.0 0.0 406.13742693738885 406.13742693738885 11.959362098959438 0.0 0.0 0.0 0 0.2742275032520141 0.0 1.805462187404089 0.0 [{M(Oxidation (M))|F}E]EEW{M(Oxidation (M))|F} 3.01 - 183 1 1.995 40024.4 0.4099999964237213 4920 3620 8539 DOHH2_400M_050219_2,8542 DOHH2_400M_050219_2,8542,EEMEWFNNY True False EEMEWFNNY 48.675115 639.242480456829 541225.3125 8539.0 ENSG00000101003|ENST00000262460|GINS1 8.810420036315918 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8544 48.681 178.0 283380.0 25 0 60961.0 35643 SVCLLLVTLA 10 64 516.3140591963595 1030.613565459519 2 516.3141967654228 MULTI CID FTMS 0 0 0 8543 373389.65625 0.5168868006966537 3 -0.1022567749023437 1 Unmodified _SVCLLLVTLA_ ENSG00000124935|ENST00000244926|SCGB1D2 3.5964929083625545 0.7100006075494749 2 P 1 10 0.3786 0.0 0.0 0.036736 0.0 0.0 810.4821090159627 120.05073724918202 930.5328462651448 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.036736 - 3 + 1 1.995 44662.9 1.0 4921 3621 8543 DOHH2_400M_050219_2,8544 DOHH2_400M_050219_2,8544,SVCLLLVTLA False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8545 48.684 164.0 219900.0 25 0 68494.0 16652 KELEKHREKL 10 57 655.3826799068972 1308.7508068805944 2 655.3823119997978 MULTI CID FTMS 0 0 0 8543 339000.59375 0.49093300640728 6 -0.1527633666992187 2 Unmodified _KELEKHREKL_ ENSG00000234545|ENST00000445716|FAM133B;ENST00000332869.5_1_10:60475484-60475616:+|nuORF;ENST00000481407.5_1_7:92207439-92210911:-|nuORF;nc|ENSG00000234545|Q5BKY9-2|FAM133B 1.1933415558491238 0.7211165886235917 2 E 1 9 3.0989 0.0 0.0 0.23679 0.0 0.0 809.4933128393819 367.19834314517817 1176.6916559845602 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.23679 + + 2 + 1 1.995 40862.2 1.0 4922 3621 8543 DOHH2_400M_050219_2,8545 DOHH2_400M_050219_2,8545,KELEKHREKL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8546 48.698 800.0 160530.0 25 0 11593.0 + 6440 EAEPHPLWEY 10 129 635.7904573439066 1269.5663617546131 2 635.7903930544853 MULTI CID FTMS 0 0 0 8543 101466.4375 0.1364783676226759 -9 0.2635574340820312 3 Unmodified _EAEPHPLWEY_ ENSG00000132600|ENST00000441236|PRMT7;ENST00000568463.1_1_16:68389580-68391124:+|nuORF;ENST00000568975.5_1_16:68386292-68391124:+|nuORF;nc|ENSG00000132600|Q9NVM4-2|PRMT7;nc|ENSG00000132600|Q9NVM4-3|PRMT7 100.7086487251713 0.0085662259466921 2 [WE][{M(Oxidation (M))|F}T]P{I|L}WEY 9 4 + 65.617 0.0 0.0 5.1685 5.1685 81.463 0.0 0.0 0.0 10.0 14.973024840566469 10.0 7.376750844102773 0 1.5501648626366045 1.3010299956639813 2.3494850021680094 0.0 [WE][{M(Oxidation (M))|F}T]P{I|L}WEY;[WE]{[ET]|[MV]}P{I|L}W{M(Oxidation (M))|F}Y;[YE][RD]P{I|L}WEY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{[CP]|[EA]}P{I|L}WEY;{[WT]|[RM]}[{M(Oxidation (M))|F}E]P{I|L}WEY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}PWE{[CP]|[EA]}EY;[EP]H{[CP]|[EA]}P{I|L}WEY;[WE][{I|L}P][{M(Oxidation (M))|F}T]WEY;[WE][{I|L}P]{[ET]|[MV]}W{M(Oxidation (M))|F}Y;{[WT]|[RM]}EEP{I|L}W{M(Oxidation (M))|F}Y 5.1685;4.5874;4.3808;4.2824;4.019;3.7371;3.6695;3.4866;3.446;3.438 -;-;-;-;-;-;-;-;-;- 2672 1 1.995 104086.9 0.4399999976158142 4923 3621 8543 DOHH2_400M_050219_2,8546 DOHH2_400M_050219_2,8546,EAEPHPLWEY True True EAEPHPLWEY 48.698194 635.790393054485 24879123.0 8543.0 nc|ENSG00000132600|Q9NVM4-2|PRMT7;;ENST00000568463.1_1_16:68389580-68391124:+|nuORF;;ENST00000568975.5_1_16:68386292-68391124:+|nuORF;;nc|ENSG00000132600|Q9NVM4-3|PRMT7;;ENSG00000132600|ENST00000441236|PRMT7 8.271523316701254 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8547 48.712 800.0 101110.0 25 0 8175.3 + 5200 DISSWFNEAI 10 119 591.2759655484904 1180.5373781637809 2 591.2761718630791 MULTI CID FTMS 0 0 0 8543 95200.84375 1.0 0 0.0 4 Unmodified _DISSWFNEAI_ ENSG00000120129|ENST00000239223|DUSP1 27.628801355627647 0.3479284626772844 2 EA[VG]YY 6 10 38.148 0.0 0.0 3.2314 0.0 0.0 0.0 495.2337740533813 495.2337740533813 -0.1503125101707851 0.0 -0.1503125101707851 0.0 0 0.2742275032520141 1.3010299956639813 0.0 0.0 EA[VG]YY 3.2314 - 464 + 1 1.995 62172.8 0.4300000071525574 4924 3621 8543 DOHH2_400M_050219_2,8547 DOHH2_400M_050219_2,8547,DISSWFNEAI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8548 48.726 800.0 78472.0 25 0 8512.1 + 24119 LYLPPTKK 8 102 480.3000175615829 958.585482189966 2 480.2992736697197 MULTI CID FTMS 0 0 0 8543 94644.859375 0.2668354537220008 6 -0.1527633666992187 5 Unmodified _LYLPPTKK_ ENST00000295797.4_1_3:170020944-170021133:+|nuORF 21.74664581756881 0.5868176546531598 2 [Y{I|L}]{I|L}P 4 4 40.005 0.0 0.0 4.1733 0.0 0.0 0.0 469.2793367975219 469.2793367975219 14.356734291156954 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + [Y{I|L}]{I|L}P 4.1733 + + 218 + 1 1.995 54450.0 0.9399999976158142 4925 3621 8543 DOHH2_400M_050219_2,8548 DOHH2_400M_050219_2,8548,LYLPPTKK False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8550 48.744 800.0 79010.0 25 0 21281.0 13407 HLLLLMFEVLV 11 88 663.8960027242318 1325.7774525152636 2 663.8953735232353 MULTI CID FTMS 0 0 0 8549 117932.7265625 0.4017199130316763 7 -0.1955184936523437 1 Unmodified _HLLLLMFEVLV_ ENSG00000226479|ENST00000426077|TMEM185B;ENSG00000269556|ENST00000600449|TMEM185A;ENST00000502900.2_1_X:148688442-148693021:-|nuORF;ENST00000517359.1_1_X:148690238-148690502:-|nuORF 1.3295316138638542 0.8688751186870782 2 K 1 11 0.9691 0.0 0.0 0.073097 0.0 0.0 867.504058815848 327.1453951471313 1194.6494539629794 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.073097 - 5 + 1 1.995 63472.7 0.5699999928474426 4926 3622 8549 DOHH2_400M_050219_2,8550 DOHH2_400M_050219_2,8550,HLLLLMFEVLV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8551 48.754 575.0 161640.0 25 0 11930.0 + 28031 IPNEIIHAL 9 116 509.7986057043217 1017.5826584754434 2 510.2979308962822 MULTI CID FTMS 0 0 0 8549 143346.171875 0.5741486281340216 -6 0.2153282165527343 2 Unmodified _PNLTKFSVI_ ENSG00000099783|ENST00000325495|HNRNPM 11.640296217721598 0.521594087909532 2 [NP]E{I|L}{I|L}KNP 8 6 53.977 0.0 0.0 5.3044 0.0 0.0 0.0 109.063077690656 109.063077690656 20.656753288559813 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.7302046884880937 [NP]E{I|L}{I|L}KNP 5.3044 - 1083 1 1.995 78650.0 1.0 4927 3622 8549 DOHH2_400M_050219_2,8551 DOHH2_400M_050219_2,8551,PNLTKFSVI False False IPNEIIHAL 48.753609 510.297930896282 2145789.0 8549.0 ENSG00000099783|ENST00000325495|HNRNPM 4.380590279897054 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8552 48.765 638.0 140450.0 25 0 9940.9 + 30553 RENFPGVSW 9 109 546.2671675439602 1090.5197821547204 2 546.2678710818291 MULTI CID FTMS 0 0 0 8549 104352.4609375 0.5983006651530333 -10 0.3142814636230469 3 Unmodified _RENFPGVSW_ ENSG00000145604|ENST00000274255|SKP2;nc|ENSG00000145604|Q13309-2|SKP2 33.4449034751529 0.1114409586740657 2 {[CT]|[{M(Oxidation (M))|F}G]}S[RP]QVDW 9 6 + 48.559 0.0 0.0 4.4528 4.4528 74.331 0.0 0.0 0.0 1.6439432979444817 1.6439432979444817 1.6439432979444817 3.4614401177851377 0 0.9247425010840048 0.0 0.8703715150305282 0.3494850021680094 {[CT]|[{M(Oxidation (M))|F}G]}S[RP]QVDW;[MT]SVQ[RP]SW;[YQ][RP]QVDW;[MT]SVQ[RP]C(Carbamidomethyl (C)){I|L};{[CT]|[{M(Oxidation (M))|F}G]}SVQ[RP]DW;{[CT]|[{M(Oxidation (M))|F}G]}S[RP][AG]VDW;[MT]SV[PG]QVSW;{[CT]|[{M(Oxidation (M))|F}G]}DVQ[RP]C(Carbamidomethyl (C)){I|L};[MT]SV[PG]QVC(Carbamidomethyl (C)){I|L};[MT]S[RP]QVSW 4.4528;4.1354;4.0753;3.9817;3.7142;3.6084;3.5583;3.4384;3.4045;3.3968 -;-;-;-;-;-;-;-;-;- 606 1 1.995 71948.8 1.0 4928 3622 8549 DOHH2_400M_050219_2,8552 DOHH2_400M_050219_2,8552,RENFPGVSW True True RENFPGVSW 48.764744 546.267871081829 14182861.5 8549.0 ENSG00000145604|ENST00000274255|SKP2;;nc|ENSG00000145604|Q13309-2|SKP2 6.944626172383626 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8553 48.773 482.0 89727.0 25 0 3592.7 + -1 ADYVVTGAW 9 78 981.9698708632196 1961.92518879324 2 982.4720947146416 MULTI CID FTMS 0 0 0 8549 133032.203125 0.6887408105856617 5 -0.1020393371582031 4 ENSG00000135069|ENST00000376588|PSAT1;nc|ENSG00000135069|Q9Y617-2|PSAT1 2 VMVAD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 7 -1 16.96 0.0 0.0 0.86447 0.0 0.0 1184.5522162364018 0.0 1184.5522162364018 0.0 2.980779081629521 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 VMVAD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 0.86447 - 928 + 1 1.995 35717.0 1.0 4929 3622 8549 DOHH2_400M_050219_2,8553 DOHH2_400M_050219_2,8553, False False ADYVVTGAW 48.773304 982.472094714642 2199828.0 8549.0 ENSG00000135069|ENST00000376588|PSAT1;;nc|ENSG00000135069|Q9Y617-2|PSAT1 4.15849894285202 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8556 48.786 345.0 145660.0 25 0 11238.0 + 40413 VIFNLSLMIVI 11 75 421.2559857384115 1260.7461278154344 3 421.2560912966728 MULTI CID FTMS 0 0 0 8555 117079.15625 0.3674335612123818 5 -0.1439857482910156 1 Unmodified _VIFNLSLMIVI_ REV__ENSG00000127249|ENST00000342695|ATP13A4;REV__nc|ENSG00000127249|Q4VNC1-4|ATP13A4 16.274544907608252 0.6966175468278786 2 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 -1 + 81.164 0.0 0.0 6.4378 6.4378 88.052 0.0 0.0 0.0 68.68948444925195 17.64136888583522 17.64136888583522 9.164539485499262 0 0.3054621874040891 2.0 0.0 0.3494850021680094 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR 6.4378;5.7108 -;- 104 + 1 1.995 50869.0 1.0 4930 3624 8555 DOHH2_400M_050219_2,8556 DOHH2_400M_050219_2,8556,VIFNLSLMIVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8557 48.794 416.0 123870.0 25 0 17422.0 + 5596 DNLKSLLEL 9 85 522.8002082632157 1043.5858635932314 2 522.8000366091728 MULTI CID FTMS 0 0 0 8555 116763.078125 0.0519180356615834 15 -0.5235595703125 2 Unmodified _DNLKSLLEL_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 32.78568957990786 0.1150597335874693 2 [DN]K{I|L}{I|L}S{I|L}E{I|L} 9 -1 + 53.394 0.0 0.0 5.1164 5.1164 74.944 0.0 0.0 0.0 7.504311474114331 38.79039059593687 7.504311474114331 1.8839576472322648 0 0.2742275032520141 0.0 0.8494850021680094 0.805462187404089 [DN]K{I|L}{I|L}S{I|L}E{I|L};[DN]K{I|L}S{I|L}{I|L}E{I|L} 5.1164;4.9359 -;- 87 1 1.995 46197.6 1.0 4931 3624 8555 DOHH2_400M_050219_2,8557 DOHH2_400M_050219_2,8557,DNLKSLLEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8558 48.807 800.0 113660.0 25 0 20975.0 + 43750 YEDGSIRIF 9 88 550.2746458903285 1098.534738847457 2 550.2745239138603 MULTI CID FTMS 0 0 0 8555 102610.84375 0.5418137787863843 -4 0.1357536315917968 3 Unmodified _YEDGSIRIF_ ENSG00000065183|ENST00000349139|WDR3 63.960520009940105 0.0238892913700936 2 YEDGS{I|L}R{I|L}{M(Oxidation (M))|F} 9 0 + 89.607 0.0 0.0 8.157 8.157 97.255 0.0 0.0 0.0 72.99420565588971 14.4812969097282 14.4812969097282 31.10251817814735 0 1.0924778212679485 2.0 0.8494850021680094 0.7614393726401688 + + YEDGS{I|L}R{I|L}{M(Oxidation (M))|F};YEWWR{I|L}{M(Oxidation (M))|F};[YE][{I|L}V]{[RE]|[WV]}QY;[{I|L}T][WQ]{I|L}{M(Oxidation (M))|F}EY;{[QN]|[E{I|L}]|[KN]}[YV]{[RE]|[WV]}QY 8.157;5.3257;2.4631;1.504;0.82363 +;-;-;-;- + 117 + 1 1.995 74205.7 0.4300000071525574 4932 3624 8555 DOHH2_400M_050219_2,8558 DOHH2_400M_050219_2,8558,YEDGSIRIF True True YEDGSIRIF 48.807415 550.27452391386 1114989.625 8555.0 ENSG00000065183|ENST00000349139|WDR3 5.91046682993571 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8561 48.828 800.0 112570.0 25 0 17890.0 24668 MLTLVFLVL 9 105 524.8271656079545 1047.639778282709 2 524.8276855349541 MULTI CID FTMS 0 0 0 8560 110020.171875 0.3237120965397292 10 -0.3903083801269531 1 Unmodified _MLTLVFLVL_ ENSG00000184349|ENST00000333274|EFNA5;ENST00000504941.1_1_5:106762801-107006392:-|nuORF 5.230669730166228 0.7320841359114558 2 Y 1 9 14.604 0.0 0.0 1.394 0.0 0.0 866.5656033332933 0.0 866.5656033332933 0.0 -0.0207536403547692 -0.0207536403547692 0.0 0 0.0 0.0 0.0 0.0 Y 1.394 - 51 + 1 1.995 74396.3 0.4399999976158142 4933 3626 8560 DOHH2_400M_050219_2,8561 DOHH2_400M_050219_2,8561,MLTLVFLVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8563 48.836 291.0 180090.0 25 0 15000.0 + 8495 ETDLLDIRSEY 11 76 677.3306547347769 1352.6467565363537 2 677.3306762576103 MULTI CID FTMS 0 0 0 8562 127221.5546875 0.2981708525996944 7 -0.3406028747558594 1 Unmodified _ETDLLDIRSEY_ ENSG00000122359|ENST00000422982|ANXA11;nc|ENSG00000122359|P50995-2|ANXA11 53.31671820480216 0.0992620867501809 2 {I|L}D{I|L}{I|L}D[DP] 7 7 46.044 0.0 0.0 3.404 0.0 0.0 553.248910537004 0.0 553.248910537004 0.0 12.895453934374572 0.0 0.0 0 1.1307196863200843 0.0 0.0 0.0 {I|L}D{I|L}{I|L}D[DP] 3.404 - 157 1 1.995 48268.9 1.0 4934 3627 8562 DOHH2_400M_050219_2,8563 DOHH2_400M_050219_2,8563,ETDLLDIRSEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8564 48.85 800.0 79825.0 25 0 17480.0 + 5993 DRLLIRIEQEI 11 81 699.4091488600855 1396.8037447869708 2 699.4089843630791 MULTI CID FTMS 0 0 0 8562 114179.5703125 0.8583978116148773 5 -0.2578887939453125 2 Unmodified _DRLLIRIEQEI_ REV__ENSG00000136758|ENST00000376016|YME1L1;REV__nc|ENSG00000136758|Q96TA2-3|YME1L1;REV__nc|ENSG00000136758|Q96TA2|YME1L1 0.9622753412299312 0.8706078577147922 2 Y 1 -1 11.259 0.0 0.0 0.80606 0.0 0.0 1215.7296613902895 0.0 1215.7296613902895 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.80606 - 2 + 1 1.995 58047.9 0.4699999988079071 4935 3627 8562 DOHH2_400M_050219_2,8564 DOHH2_400M_050219_2,8564,DRLLIRIEQEI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8565 48.863 800.0 76851.0 25 0 10523.0 + 10961 GALYKQMKLLS 11 73 626.3611604106973 1250.7077678881944 2 626.3616821169853 MULTI CID FTMS 0 0 0 8562 91458.015625 1.0 0 0.0 3 Unmodified _GALYKQMKLLS_ REV__AluSq2_dup37925|chr11:61391283-61391540:+|1.113432909944505|0.041105984733163|4.76|47.0|7|3|sense 4.897010918128616 0.8520435188433833 2 Y 1 -1 12.474 0.0 0.0 0.99738 0.0 0.0 1069.6331046575287 0.0 1069.6331046575287 0.0 1.054266826574466 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.99738 + + 21 + 1 1.995 52967.3 0.4199999868869781 4936 3627 8562 DOHH2_400M_050219_2,8565 DOHH2_400M_050219_2,8565,GALYKQMKLLS False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8567 48.88 800.0 146800.0 25 0 15436.0 19291 LEKSAVLELFA 11 112 610.3486906088542 1218.6828282845083 2 610.3489257693291 MULTI CID FTMS 0 0 0 8566 64802.234375 0.7495460082340226 1 -0.0579147338867187 1 Unmodified _LEKSAVLELFA_ ENST00000515753.1_1_10:69833717-69833930:-|nuORF 8.155526934196011 0.8366696279279818 2 {[QN]|[E{I|L}]|[KN]}K 3 8 10.29 0.0 0.0 0.84439 0.0 0.0 0.0 845.4398832984333 845.4398832984333 8.071968632008437 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 + {[QN]|[E{I|L}]|[KN]}K 0.84439 + + 49 1 1.995 90232.4 0.3899999856948852 4937 3628 8566 DOHH2_400M_050219_2,8567 DOHH2_400M_050219_2,8567,LEKSAVLELFA False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8568 48.894 800.0 49589.0 25 0 5728.0 -1 0 57 1035.1617873173575 3102.463532552273 3 1035.826220691204 MULTI CID FTMS 0 0 0 8566 107694.8828125 0.2133045668372759 16 -0.5120391845703125 2 2 G{I|L} 2 -1 12.959 0.0 0.0 0.41769 0.0 0.0 2288.0472250344988 641.2682589166624 2929.315483951161 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 G{I|L} 0.41769 - 160 + 1 1.995 38289.0 0.4099999964237213 4938 3628 8566 DOHH2_400M_050219_2,8568 DOHH2_400M_050219_2,8568, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8569 48.908 800.0 87709.0 25 0 21000.0 37982 TNICRYLDWI 10 70 432.8850816709645 0 432.8847534060478 PEAK CID FTMS 0 0 0 8566 86560.734375 0.8702886809579152 -41 1.8989486694335933 3 Unmodified _TNICRYLDWI_ ENSG00000129455|ENST00000695909|KLK8;nc|ENSG00000129455|O60259-2|KLK8;nc|ENSG00000129455|O60259-3|KLK8 1.9063754702782607 0.3961065659209837 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 61596.6 0.3700000047683716 4939 3628 8566 DOHH2_400M_050219_2,8569 DOHH2_400M_050219_2,8569,TNICRYLDWI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8570 48.921 800.0 100360.0 25 0 5980.1 + 19396 LESFIDTQKF 10 87 614.3167938589752 1226.6190347847505 2 614.3168823122978 MULTI CID FTMS 0 0 0 8566 78463.0859375 1.0 0 0.0 4 Unmodified _LESFIDTQKF_ ENSG00000073111|ENST00000265056|MCM2;ENST00000468414.1_1_3:127336783-127340613:+|nuORF;ENST00000474964.5_1_3:127323572-127340613:+|nuORF 32.037481411007896 0.2488723560272515 2 {[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}{I|L}D[QT]K{M(Oxidation (M))|F} 10 0 + 60.896 0.0 0.0 4.9645 4.9645 80.755 0.0 0.0 0.0 21.58661594732408 7.501225267834002 7.501225267834002 7.501225267834002 0 0.805462187404089 2.0 0.4247425010840047 0.0 + + {[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}{I|L}D[QT]K{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}{I|L}[RH]YY;{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}{I|L}D[RH][NP];{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}{I|L}[RH]D[NP];{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}[YK][QP]{[ES]|[DT]|[{I|L}C]};{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}[YK]{[ET]|[MV]}[NP];{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}[YK][MN][VP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}C{I|L}{I|L}[RH]YY;[VP]P[QT]D{I|L}{I|L}C{[QN]|[E{I|L}]|[KN]} 4.9645;4.353;3.8248;3.7208;2.6663;2.4999;1.6057;0.32766;0.0112 +;-;-;-;-;-;-;-;- + 218 + 1 1.995 62485.3 0.3899999856948852 4940 3628 8566 DOHH2_400M_050219_2,8570 DOHH2_400M_050219_2,8570,LESFIDTQKF False True LESFIDTQKF 48.921355 614.316882312298 417168.03125 8566.0 ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2;;ENST00000468414.1_1_3:127336783-127340613:+|nuORF 5.721525986989339 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8572 48.939 800.0 120420.0 25 0 9186.6 -1 0 111 974.9615473026256 1947.9085416720511 2 974.9631835818292 MULTI CID FTMS 0 0 0 8571 115240.9296875 0.2814927426711092 14 -0.4500656127929687 1 2 [NP]{I|L}NAD[PG]RQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 18 -1 + 92.698 0.0 0.0 4.7588 4.7588 78.214 0.0 0.0 0.0 14.303335376747311 69.56408725516025 14.303335376747311 6.020599913279625 0 1.8807196863200843 0.958607314841775 0.3494850021680094 0.7302046884880937 [NP]{I|L}NAD[PG]RQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]VQAD[PG]RQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[PG]RQWN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[PG][VG]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[PG]R[AG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGAD[PG]RQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[PG]RQDAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[PG]RQDAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}D{[QG]|[NA]}[PG]RQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]VQAD[PG]RQWN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.7588;4.4498;4.4127;4.2975;4.2975;4.2975;4.2975;4.2975;4.1397;4.1037 -;-;-;-;-;-;-;-;-;- 3796 1 1.995 68150.2 0.9300000071525574 4941 3629 8571 DOHH2_400M_050219_2,8572 DOHH2_400M_050219_2,8572, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8573 48.944 266.0 196780.0 25 0 36218.0 + 6758 EDTLRKKHTLL 11 81 677.3959595610053 1352.7773661888104 2 677.3952514529228 MULTI CID FTMS 0 0 0 8571 205739.09375 0.4154776008531626 -4 0.1139411926269531 2 Unmodified _EDTLRKKHTLL_ REV__ENSG00000111199|ENST00000261740|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-2|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-3|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-4|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-5|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-6|TRPV4 1.3295316138638542 0.8688751186870782 2 D{I|L}{I|L}D{I|L} 5 -1 26.454 0.0 0.0 1.9555 0.0 0.0 230.2173819132229 550.2238253229124 780.4412072361354 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L}{I|L}D{I|L} 1.9555 - 27 + 1 1.995 50431.7 1.0 4942 3629 8571 DOHH2_400M_050219_2,8573 DOHH2_400M_050219_2,8573,EDTLRKKHTLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8574 48.947 171.0 346400.0 25 0 28911.0 + 30215 QVYQKILSI 9 91 546.3267325650966 1090.638912196993 2 546.3271362185478 MULTI CID FTMS 0 0 0 8571 198922.890625 0.5867952972913527 -1 0.0579147338867187 3 Unmodified _QVYQKILSI_ REV__ENSG00000009413|ENST00000368802|REV3L;REV__ENST00000462119.5_1_6:111628768-111636625:-|nuORF;REV__nc|ENSG00000009413|O60673-2|REV3L 32.30548876998284 0.1201446275138228 2 {[QV]|[N{I|L}]|[RA]|[KV]}K 3 -1 31.325 0.0 0.0 2.8721 0.0 0.0 0.0 732.3941568809889 732.3941568809889 15.126656038284452 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}K 2.8721 - 235 + 1 1.995 55344.4 1.0 4943 3629 8571 DOHH2_400M_050219_2,8574 DOHH2_400M_050219_2,8574,QVYQKILSI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8575 48.951 210.0 283520.0 25 0 24337.0 + 43283 WIKEKIYVL 9 102 596.3595147203442 1190.7044765074884 2 596.3608276247978 MULTI CID FTMS 0 0 0 8571 190634.140625 0.6210633724058485 -1 0.0579147338867187 4 Unmodified _WIKEKIYVL_ ENSG00000100632|ENST00000557016|ERH;ENST00000216520.6_1_14:69847257-69864987:-|nuORF 39.94969957227396 0.0757326808254658 2 W{I|L}K 3 6 44.481 0.0 0.0 3.7357 0.0 0.0 0.0 760.4233492486936 760.4233492486936 20.38241865052136 0.0 0.0 0.0 0 0.6549471895720985 2.0 0.0 0.0 + W{I|L}K 3.7357 + + 148 + 1 1.995 49994.2 1.0 4944 3629 8571 DOHH2_400M_050219_2,8575 DOHH2_400M_050219_2,8575,WIKEKIYVL True True WIKEKIYVL 48.951353 596.360827624798 1803075.625 8571.0 ENSG00000100632|ENST00000557016|ERH;;ENST00000216520.6_1_14:69847257-69864987:-|nuORF 4.275370518366496 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8576 48.961 523.0 184230.0 25 0 15015.0 + 528 AEIDAHLVAL 10 119 526.2931552787092 1050.5717576242182 2 526.2932006716728 MULTI CID FTMS 0 0 0 8571 180841.3125 0.7810830394784287 -1 0.0579147338867187 5 Unmodified _AEIDAHLVAL_ ENSG00000100902|ENST00000261479|PSMA6;ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;ENST00000554457.1_1_14:35786443-35786509:+|nuORF;nc|ENSG00000100902|P60900-2|PSMA6;nc|ENSG00000100902|P60900-3|PSMA6 78.14939416004806 0.0185844602684931 2 [{I|L}A]HD{I|L}VAEA{I|L} 10 6 + 68.254 0.0 0.0 6.4969 6.4969 79.517 0.0 0.0 0.0 3.4678748622465605 16.53212513775344 3.4678748622465605 1.5186375580366729 0 0.7614393726401688 1.0457574905606752 0.3807196863200844 0.0 [{I|L}A]HD{I|L}VAEA{I|L};[{I|L}A]HD{I|L}VEAA{I|L};[{I|L}A]HD{I|L}EAVA{I|L};[{I|L}A]HDV{I|L}AEA{I|L};[H{I|L}]AD{I|L}VAEA{I|L};[HA]D{I|L}{I|L}VAEA{I|L};[{I|L}A]HDV{I|L}EAA{I|L};[{I|L}A]HD{I|L}G{I|L}EA{I|L};[{I|L}A]HVEVAEA{I|L};[H{I|L}]AD{I|L}VEAA{I|L} 6.4969;6.3523;6.3414;6.2103;6.1668;6.1668;6.0658;6.0427;6.0427;6.0222 -;-;-;-;-;-;-;-;-;- 5190 1 1.995 79493.4 1.0 4945 3629 8571 DOHH2_400M_050219_2,8576 DOHH2_400M_050219_2,8576,AEIDAHLVAL True True AEIDAHLVAL 48.960574 526.293200671673 1253461.75 8571.0 ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;;ENST00000554457.1_1_14:35786443-35786509:+|nuORF;;ENSG00000100902|ENST00000261479|PSMA6;;nc|ENSG00000100902|P60900-2|PSMA6;;nc|ENSG00000100902|P60900-3|PSMA6 4.401427666346232 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8578 48.965 75.0 760800.0 25 0 69637.0 + 6441 EAEPHPLWEY 10 67 635.7904573439066 1269.5663617546131 2 635.7906982302666 MULTI CID FTMS 0 0 0 8577 743461.6875 1.0 0 0.0 1 Unmodified _EAEPHPLWEY_ ENSG00000132600|ENST00000441236|PRMT7;ENST00000568463.1_1_16:68389580-68391124:+|nuORF;ENST00000568975.5_1_16:68386292-68391124:+|nuORF;nc|ENSG00000132600|Q9NVM4-2|PRMT7;nc|ENSG00000132600|Q9NVM4-3|PRMT7 57.24910588100465 0.0438022649904578 2 [WE]{[ET]|[MV]}P{I|L}W{M(Oxidation (M))|F}Y 9 4 + 42.853 0.0 0.0 3.3754 3.3754 68.207 0.0 0.0 0.0 1.4620533287528303 12.324478088933262 1.4620533287528303 1.4620533287528303 0 0.5 0.0 0.5 0.0 [WE]{[ET]|[MV]}P{I|L}W{M(Oxidation (M))|F}Y;[YE][RD][{I|L}P]WEY;[WE][{M(Oxidation (M))|F}T][{I|L}P]WEY;[{M(Oxidation (M))|F}V][RD]{I|L}E{[CP]|[EA]}EY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}P]WE{[CP]|[EA]}EY;[YE][QP][KQ]WEY;[WE][{I|L}P][{M(Oxidation (M))|F}T]WEY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]{[ET]|[MV]}W{M(Oxidation (M))|F}Y;[WE][{I|L}P]{[ET]|[MV]}W{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK][{M(Oxidation (M))|F}T]WEY 3.3754;3.2603;3.0232;2.5485;2.4501;2.4279;2.0923;1.9176;1.8985;1.8552 -;-;-;-;-;-;-;-;-;- 420 1 1.995 48601.4 1.0 4946 3630 8577 DOHH2_400M_050219_2,8578 DOHH2_400M_050219_2,8578,EAEPHPLWEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8579 48.979 800.0 137540.0 25 0 26822.0 12269 GRDLRGQPRVR 11 137 655.3826799068972 1308.7508068805944 2 655.3826171755791 MULTI CID FTMS 0 0 0 8577 199210.21875 0.2884917413156873 15 -0.418975830078125 2 Unmodified _GRDLRGQPRVR_ ENST00000256509.6_1_3:238430-286315:+|nuORF 2.498486711656943 0.8633599123570009 2 {[HG]|PP}QQ{I|L} 5 9 5.9421 0.0 0.0 0.45403 0.0 0.0 0.0 742.4451787890506 742.4451787890506 1.3380312008851538 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}QQ{I|L} 0.45403 - 129 1 1.995 100869.2 0.6299999952316284 4947 3630 8577 DOHH2_400M_050219_2,8579 DOHH2_400M_050219_2,8579,GRDLRGQPRVR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8580 48.982 160.0 227380.0 25 0 13715.0 + 42361 VTDGAILGKLY 11 77 575.3295293093312 1148.6445056854625 2 575.3287841677666 MULTI CID FTMS 0 0 0 8577 170561.984375 0.708134869870418 -1 0.039215087890625 3 Unmodified _VTDGAILGKLY_ ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C 23.015651743759182 0.551788120787869 2 {[TV]|[{I|L}S]}RS{I|L}{I|L}GK{I|L} 9 4 49.051 0.0 0.0 4.2704 0.0 0.0 0.0 178.05132471256096 178.05132471256096 31.348200093054714 0.0 0.0 0.0 0 1.3979400086720375 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}RS{I|L}{I|L}GK{I|L} 4.2704 - 192 + 1 1.995 35176.0 1.0 4948 3630 8577 DOHH2_400M_050219_2,8580 DOHH2_400M_050219_2,8580,VTDGAILGKLY False True VTDGAILGKLY 48.982349 575.328784167767 1416223.125 8577.0 nc|ENSG00000055609|Q8NEZ4-3|KMT2C;;ENSG00000055609|ENST00000262189|KMT2C;;nc|ENSG00000055609|Q8NEZ4-2|KMT2C 5.422852516174316 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8581 48.996 800.0 62466.0 25 0 14973.0 + 16853 KIEIREVKIGW 11 73 685.9091083889856 1369.803663844771 2 685.9091674685478 MULTI CID FTMS 0 0 0 8577 111720.96875 0.6625883541706282 -3 0.1326942443847656 4 Unmodified _KIEIREVKIGW_ REV__ENSG00000116218|ENST00000367615|NPHS2;REV__nc|ENSG00000116218|Q9NP85-2|NPHS2 1.1933415558491238 0.8695176722560516 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.995 48301.1 0.4600000083446502 4949 3630 8577 DOHH2_400M_050219_2,8581 DOHH2_400M_050219_2,8581,KIEIREVKIGW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8582 49.008 662.0 130490.0 25 0 5848.0 + 29139 QEVDFFQRY 9 94 616.2910189861736 1230.5674850391472 2 616.2908813357353 MULTI CID FTMS 0 0 0 8577 96139.6953125 1.0 0 0.0 5 Unmodified _QEVDFFQRY_ ENSG00000149262|ENST00000534064|INTS4 67.83816525789305 0.0219346420158844 2 QEVD{M(Oxidation (M))|F}{M(Oxidation (M))|F}QRY 9 0 + 84.924 0.0 0.0 6.9012 6.9012 90.288 0.0 0.0 0.0 73.81502413901542 12.587418566968154 12.587418566968154 9.208187539523747 0 1.1382104921644451 1.3979400086720375 0.0 0.0 + + QEVD{M(Oxidation (M))|F}{M(Oxidation (M))|F}QRY;QEVD{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG]RY;QEVD{M(Oxidation (M))|F}{M(Oxidation (M))|F}[HN][VP];[AG]EVD{M(Oxidation (M))|F}{M(Oxidation (M))|F}[HV][NP];QEVD{M(Oxidation (M))|F}{[CP]|[EA]}[TP][VP];QEVY[R{M(Oxidation (M))|F}]{[CA]|SS}{[ES]|[DT]|[{I|L}C]};QEVY[R{M(Oxidation (M))|F}]{[TV]|[{I|L}S]}[CS] 6.9012;6.1529;4.366;4.0606;2.9345;2.3758;2.1311 +;-;-;-;-;-;- + 390 + 1 1.995 69393.7 1.0 4950 3630 8577 DOHH2_400M_050219_2,8582 DOHH2_400M_050219_2,8582,QEVDFFQRY True True QEVDFFQRY 49.007726 616.290881335735 701296.0625 8577.0 ENSG00000149262|ENST00000534064|INTS4 7.651471455891927 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8583 49.022 800.0 295520.0 25 0 49602.0 + 17961 KRGDVIYIL 9 109 538.8268691261638 1075.6391853191276 2 538.8267700076103 MULTI CID FTMS 0 0 0 8577 84087.5 0.0154908425562989 -6 0.1832008361816406 6 Unmodified _KRGDVIYIL_ ENSG00000005020|ENST00000345317|SKAP2 53.832793166522166 0.0319663582346103 2 [RK][DG]V{I|L}Y{I|L}{I|L} 9 0 + 58.183 0.0 0.0 5.4092 5.4092 81.037 0.0 0.0 0.0 11.992333953776964 44.37076236157729 11.992333953776964 6.262874945799766 0 0.805462187404089 0.0 0.7059771852360797 1.1976212463643423 + + [RK][DG]V{I|L}Y{I|L}{I|L};[RK][DG]VY{I|L}{I|L}{I|L};[RK][DG]{I|L}VY{I|L}{I|L};[RK][DG]V{I|L}{I|L}Y{I|L};[RK][DG]YV{I|L}{I|L}{I|L};[RK][DG]Y{I|L}V{I|L}{I|L};[Y{I|L}][RK][DG]V{I|L}{I|L};[RK][DG]{I|L}YV{I|L}{I|L};[RK][DG]{I|L}V{I|L}Y{I|L};[RK][Y{I|L}][DG]V{I|L}{I|L} 5.4092;4.8269;4.0478;3.9843;3.7454;3.3755;3.3222;3.0956;2.623;1.426 +;-;-;-;-;-;-;-;-;- + 350 1 1.995 179357.2 0.4000000059604645 4951 3630 8577 DOHH2_400M_050219_2,8583 DOHH2_400M_050219_2,8583,KRGDVIYIL True True KRGDVIYIL 49.021557 538.82677000761 128181788.0 8577.0 ENSG00000005020|ENST00000345317|SKAP2 3.047151684761048 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8584 49.033 636.0 69489.0 25 0 9446.3 + 32066 RVLFLGDVL 9 81 516.3140591963595 1030.613565459519 2 516.3143188357353 MULTI CID FTMS 0 0 0 8577 109685.9609375 0.1518393037442973 12 -0.3919105529785156 7 Unmodified _RVLFLGDVL_ REV__ENSG00000141738|ENST00000309156|GRB7;REV__nc|ENSG00000141738|Q14451-3|GRB7;REV__nc|ENSG00000141738|Q14451-4|GRB7 7.289230182591677 0.6602208344931196 2 {I|L} 1 -1 13.099 0.0 0.0 1.271 0.0 0.0 899.518562263033 0.0 899.518562263033 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.271 + + 17 + 1 1.995 39365.6 1.0 4952 3630 8577 DOHH2_400M_050219_2,8584 DOHH2_400M_050219_2,8584,RVLFLGDVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8586 49.04 196.0 196940.0 25 0 26744.0 + 20654 LLQFQKEL 8 76 509.7986057043217 1017.5826584754434 2 510.2984191775322 MULTI CID FTMS 0 0 0 8585 142725.84375 0.5716640096938983 3 -0.1358146667480468 1 Unmodified _LLQFQKEL_ REV__ENSG00000106278|ENST00000393386|PTPRZ1;REV__nc|ENSG00000106278|P23471-2|PTPRZ1;REV__nc|ENSG00000106278|P23471-3|PTPRZ1 26.34127834903884 0.4900704351052977 2 {I|L}{I|L}[C(Carbamidomethyl (C))K][KP]{M(Oxidation (M))|F}{I|L} 8 -1 + 20.876 0.0 0.0 2.0515 2.0515 79.265 0.0 0.0 0.0 1.3122813092856234 13.88621229653701 1.3122813092856234 20.8759123398972 0 0.4247425010840047 2.0 0.0 0.3494850021680094 {I|L}{I|L}[C(Carbamidomethyl (C))K][KP]{M(Oxidation (M))|F}{I|L} 2.0515 - 92 + 1 1.995 37828.9 1.0 4953 3631 8585 DOHH2_400M_050219_2,8586 DOHH2_400M_050219_2,8586,LLQFQKEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8587 49.054 800.0 66963.0 25 0 4798.5 -1 0 70 1029.1599733364048 3084.4580906094147 3 1029.828540027142 MULTI CID FTMS 0 0 0 8585 125932.5859375 1.0 0 0.0 2 2 M{[QD]|[EN]|[WG]|[KD]|[RS]} 3 -1 10.458 0.0 0.0 0.33904 0.0 0.0 2692.272190311093 0.0 2692.272190311093 0.0 3.4678748622465623 0.0 0.0 0 0.0 0.0 0.0 0.0 M{[QD]|[EN]|[WG]|[KD]|[RS]} 0.33904 - 129 1 1.995 45367.7 0.4099999964237213 4954 3631 8585 DOHH2_400M_050219_2,8587 DOHH2_400M_050219_2,8587, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8588 49.059 252.0 280400.0 25 0 92087.0 + 24691 MMKSMTVPF 9 95 536.2550088480788 1070.4954647629577 2 536.2559081912041 MULTI CID FTMS 0 0 0 8585 232465.875 0.2323369570309674 -4 0.2047882080078125 3 Unmodified _MMKSMTVPF_ ENST00000512561.5_1_5:68651732-68651771:-|nuORF 30.63653989081413 0.1413794767160703 2 [YV]MMKV[WD] 8 7 + 46.119 0.0 0.0 4.3082 4.3082 78.97 0.0 0.0 0.0 18.089989253352563 3.2070278039248734 3.2070278039248734 8.947340481202062 0 0.5 0.0 2.3494850021680094 0.0 [YV]MMKV[WD];[WD]VKMMVY;[WD]KVMMVY;[YV]MTVSWW;[YV]MTSVWW;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}MSVTMP{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}MVSTMP{M(Oxidation (M))|F};[WD]K{M(Oxidation (M))|F}TMP{M(Oxidation (M))|F};[YV]V[MT]SWW;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}MS[MT]VP{M(Oxidation (M))|F} 4.3082;3.4724;2.5633;2.5316;2.5316;2.5254;2.5254;2.4399;2.3523;2.3461 -;-;-;-;-;-;-;-;-;- 971 + 1 1.995 69873.7 1.0 4955 3631 8585 DOHH2_400M_050219_2,8588 DOHH2_400M_050219_2,8588,MMKSMTVPF False True MMKSMTVPF 49.058848 536.255908191204 6147994.5 8585.0 ENST00000512561.5_1_5:68651732-68651771:-|nuORF 0.7423325479030609 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8589 49.067 480.0 325580.0 25 0 66460.0 + -1 VMILMLVLL 9 136 359.55364384236424 1075.6391021272927 3 359.5535461306572 MULTI CID FTMS 0 0 0 8585 201267.125 0.1329967068356886 -5 0.2211799621582031 4 2 Oxidation (M) _VM(Oxidation (M))ILM(Oxidation (M))LVLL_ REV__ENSG00000112195|ENST00000483722|TREML2 13.90604991867851 0.4602628045680013 2 Y[HA]V{I|L}Y{I|L}{I|L} 8 -1 22.568 0.0 0.0 2.0981 0.0 0.0 85.08977706123203 0.0 85.08977706123203 0.0 5.578278345927217 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.0 Y[HA]V{I|L}Y{I|L}{I|L} 2.0981 - 175 1 1.995 128820.1 1.0 4956 3631 8585 DOHH2_400M_050219_2,8589 DOHH2_400M_050219_2,8589,VMILMLVLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8590 49.072 247.0 237140.0 25 0 30987.0 42593 VTRLAPPTL 9 76 484.30007527245385 966.5855976117076 2 484.3004333376884 MULTI CID FTMS 0 0 0 8585 163393.09375 0.6365286054932374 -1 0.0720939636230468 5 Unmodified _VTRLAPPTL_ ENST00000283131.3_1_4:144434789-144434849:+|nuORF 18.1463463914782 0.3454829746528889 2 [QP]{I|L}{I|L}R 5 8 20.713 0.0 0.0 2.1429 0.0 0.0 0.0 356.1836031549438 356.1836031549438 0.2287874528033739 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [QP]{I|L}{I|L}R 2.1429 - 73 + 1 1.995 49862.3 1.0 4957 3631 8585 DOHH2_400M_050219_2,8590 DOHH2_400M_050219_2,8590,VTRLAPPTL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8591 49.086 800.0 96244.0 25 0 9431.9 + 29030 QEFDFIKSY 9 99 588.7819195539714 1175.5492861747427 2 588.7817870974541 MULTI CID FTMS 0 0 0 8585 94015.9765625 0.752272107693657 -1 0.0720939636230468 6 Unmodified _QEFDFIKSY_ ENSG00000129173|ENST00000250024|E2F8 57.72198328787511 0.0273433238377839 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}KSY 9 0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F} + + 38.167 14.283 3.534 3.2467 3.2467 49.409 0.0 0.0 0.0 0.0 14.023722004121453 0.0 0.0 0 0.3252574989159953 0.0 0.3054621874040891 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}KSY 3.2467 + + 273 + 1 1.995 62822.0 0.4399999976158142 4958 3631 8585 DOHH2_400M_050219_2,8591 DOHH2_400M_050219_2,8591,QEFDFIKSY True True QEFDFIKSY 49.085765 588.781787097454 643043.5 8585.0 ENSG00000129173|ENST00000250024|E2F8 7.769596099853516 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8593 49.098 538.0 123990.0 25 0 45458.0 -1 0 69 530.2980632360723 529.2907867694722 1 530.2976562380791 MULTI CID FTMS 0 0 0 8592 80309.546875 0.2582829981226055 4 -0.11602783203125 1 2 [PG]{M(Oxidation (M))|F}P{I|L} 5 -1 + 51.98 0.0 0.0 9.8208 9.8208 97.698 0.0 0.0 0.0 5.075202072186499 5.075202072186499 5.075202072186499 21.505149978319903 0 1.1803115997617928 1.3979400086720375 0.0 0.0 [PG]{M(Oxidation (M))|F}P{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{I|L} 9.8208;5.7578 -;- 35 1 1.995 57120.9 1.0 4959 3632 8592 DOHH2_400M_050219_2,8593 DOHH2_400M_050219_2,8593, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8594 49.101 186.0 409770.0 25 0 24112.0 + 6895 EEFDARWVTY 10 94 658.3013959414446 1314.5882389496892 2 658.3013793826103 MULTI CID FTMS 0 0 0 8592 367942.75 0.3054438268436829 -5 0.2578887939453125 2 Unmodified _EEFDARWVTY_ ENSG00000178741|ENST00000322347|COX5A 59.17704102725264 0.0387449460849098 2 EE{M(Oxidation (M))|F}DH 5 6 42.703 0.0 0.0 3.2484 0.0 0.0 0.0 654.3231548482668 654.3231548482668 -1.967809330011434 0.0 -1.967809330011434 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 EE{M(Oxidation (M))|F}DH 3.2484 - 548 + 1 1.995 60293.3 1.0 4960 3632 8592 DOHH2_400M_050219_2,8594 DOHH2_400M_050219_2,8594,EEFDARWVTY True True EEFDARWVTY 49.101369 658.30137938261 16192032.0 8592.0 ENSG00000178741|ENST00000322347|COX5A 9.194420178731283 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8595 49.105 204.0 512060.0 25 0 122670.0 + -1 IIVPMMIL 8 91 473.2797919637968 944.5450309943936 2 473.2794677615166 MULTI CID FTMS 0 0 0 8592 315937.1875 0.469224896327186 -5 0.2578887939453125 3 Oxidation (M) _IIVPM(Oxidation (M))MIL_ REV__ENST00000361908.7_1_3:193355005-193355792:+|nuORF 17.086550045450526 0.6584923310065985 2 {I|L}Y{I|L}V 4 -1 51.67 0.0 0.0 5.4704 0.0 0.0 0.0 453.2225130670532 453.2225130670532 43.7113751626007 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}Y{I|L}V 5.4704 - 172 + 1 1.995 85564.7 1.0 4961 3632 8592 DOHH2_400M_050219_2,8595 DOHH2_400M_050219_2,8595,IIVPMMIL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8596 49.108 153.0 260830.0 25 0 17170.0 + 25519 NENSLFKSL 9 72 526.2736062060753 1050.5326594789506 2 526.2749511599541 MULTI CID FTMS 0 0 0 8592 166692.609375 0.4314891606434087 -3 0.1644096374511718 4 Unmodified _NENSLFKSL_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 31.26834338654808 0.1333407332142048 2 {[QD]|[EN]|[WG]|[KD]|[RS]}[WQ]{M(Oxidation (M))|F}KS{I|L} 8 3 + 23.65 0.0 0.0 2.2513 2.2513 78.284 0.0 0.0 0.0 6.763546500973597 10.974184576165348 6.763546500973597 14.648867983026513 0 0.3807196863200844 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}[WQ]{M(Oxidation (M))|F}KS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[WQ][YK]A{I|L} 2.2513;0.85684 -;- 100 + 1 1.995 34796.1 1.0 4962 3632 8592 DOHH2_400M_050219_2,8596 DOHH2_400M_050219_2,8596,NENSLFKSL False True NENSLFKSL 49.108302 526.274951159954 2206997.75 8592.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 3.481719493865967 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8597 49.112 177.0 242210.0 25 0 15057.0 7320 EEWKRASW 8 73 546.2671675439602 1090.5197821547204 2 546.2670165896416 MULTI CID FTMS 0 0 0 8592 174414.75 1.0 0 0.0 5 Unmodified _EEWKRASW_ ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14 20.453626601364224 0.6087503291685402 2 {[QV]|[N{I|L}]|[RA]|[KV]}[DG]{M(Oxidation (M))|F}[PG]VSW 10 8 + 41.132 0.0 0.0 3.7717 3.7717 75.482 0.0 0.0 0.0 8.736480491502505 8.736480491502505 8.736480491502505 6.532125137753432 0 0.9247425010840048 1.5228787452803376 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[DG]{M(Oxidation (M))|F}[PG]VSW;{[QV]|[N{I|L}]|[RA]|[KV]}[DG]{M(Oxidation (M))|F}[RP]SW;{[QV]|[N{I|L}]|[RA]|[KV]}[DG]{M(Oxidation (M))|F}[PG]WW;{[QV]|[N{I|L}]|[RA]|[KV]}[DG]{M(Oxidation (M))|F}[KP]DW;[MT]S[RP]QVC(Carbamidomethyl (C)){I|L};[MT]S[RP]QVSW;{[CT]|[{M(Oxidation (M))|F}G]}SVQ[RP]DW;[YQ]VQ[RP]DW;{[CT]|[{M(Oxidation (M))|F}G]}D[RP]QVC(Carbamidomethyl (C)){I|L};[MT]S[RP]{[WN]|[YH]}S{I|L} 3.7717;3.1728;2.9903;2.9903;2.9706;2.8681;2.6401;2.3911;1.9636;1.6682 -;-;-;-;-;-;-;-;-;- 114 1 1.995 42519.6 1.0 4963 3632 8592 DOHH2_400M_050219_2,8597 DOHH2_400M_050219_2,8597,EEWKRASW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8598 49.122 590.0 168120.0 25 0 13329.0 + 10727 RMDNIYFEY 9 84 625.7783974897862 1249.5422420463724 2 625.7785522341728 MULTI CID FTMS 0 0 0 8592 138533.609375 1.0 0 0.0 6 Unmodified _FYERLNMDY_ ENSG00000113318|ENST00000265081|MSH3 20.453626601364224 0.2830276176381075 2 N{I|L}Y{M(Oxidation (M))|F}EY 6 6 51.899 0.0 0.0 4.1534 0.0 0.0 402.1685963361344 0.0 402.1685963361344 0.0 37.2062251842808 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3494850021680094 N{I|L}Y{M(Oxidation (M))|F}EY 4.1534 - 226 1 1.995 79996.3 1.0 4964 3632 8592 DOHH2_400M_050219_2,8598 DOHH2_400M_050219_2,8598,FYERLNMDY False False RMDNIYFEY 49.122081 625.778552234173 838012.875 8592.0 ENSG00000113318|ENST00000265081|MSH3 7.0813727378845215 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8599 49.136 800.0 88189.0 25 0 7280.4 + 33395 SGSDVILHL 9 115 470.7587340009964 939.5029150687928 2 470.7589294314384 MULTI CID FTMS 0 0 0 8592 123895.140625 0.870371701799504 -1 0.0531005859375 7 Unmodified _SGSDVILHL_ ENST00000420969.1_1_2:162360026-162361742:-|nuORF 60.38955033654506 0.025866396858536 2 [SG]SDV{I|L}{I|L}H{I|L} 9 0 [SG] + + 49.825 20.458 14.201 5.3034 5.3034 56.645 0.0 0.0 0.0 0.0 34.34070099586343 0.0 0.0 0 1.2614393726401687 0.0 0.0 0.0 + + [SG]SDV{I|L}{I|L}H{I|L} 5.3034 + + 155 + 1 1.995 59875.6 0.4699999988079071 4965 3632 8592 DOHH2_400M_050219_2,8599 DOHH2_400M_050219_2,8599,SGSDVILHL True True SGSDVILHL 49.135896 470.758929431438 595742.5625 8592.0 ENST00000420969.1_1_2:162360026-162361742:-|nuORF 6.446293354034424 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8601 49.154 800.0 93483.0 25 0 14225.0 + -1 SLSTFQQMW 9 119 572.260061432051 1142.505569930902 2 572.2604247927666 MULTI CID FTMS 0 0 0 8600 153970.671875 1.0 0 0.0 1 Oxidation (M) _SLSTFQQM(Oxidation (M))W_ ENSG00000188219|ENST00000683005|POTEE;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;ENSG00000143632|ENST00000366684|ACTA1;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000163017|ENST00000345517|ACTG2;ENST00000428275.1_1_X:53172047-53172134:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENSG00000075624|ENST00000646664|ACTB;ENSG00000196604|ENST00000409914|POTEF;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000196834|ENST00000451531|POTEI;ENSG00000184009|ENST00000573283|ACTG1;ENST00000574671.5_1_17:79477718-79478688:-|nuORF 36.04419817259434 0.0971720506436186 2 [YT]ST{[WT]|[RM]}QAW 9 -1 + 31.092 0.0 0.0 2.7214 2.7214 70.118 0.0 0.0 0.0 7.363715560249563 2.5972951650759235 2.5972951650759235 3.974315640635595 0 0.0 0.0 0.0 0.0 [YT]ST{[WT]|[RM]}QAW;[YT]S[Q{I|L}]AQ{M(Oxidation (M))|F}W;{[TV]|[{I|L}S]}S{[{M(Oxidation (M))|F}H]|[RQ]}[YG]S[{M(Oxidation (M))|F}V];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W[KT]TS[{M(Oxidation (M))|F}V];[YT]ST{[WT]|[RM]}[AG]AW;[YT]S[Q{I|L}]{M(Oxidation (M))|F}QAW;[YT]S[Q{I|L}]A{[CT]|[{M(Oxidation (M))|F}G]}AW;[YT]S[YG][PA]QAW;[YT]ST[KT]C[PG]W;{[WT]|[RM]}AC[KT]TS[{M(Oxidation (M))|F}V] 2.7214;2.3736;2.1331;2.0097;1.9155;1.8862;1.672;1.652;1.5934;1.5934 -;-;-;-;-;-;-;-;-;- 865 + 1 1.995 57975.1 0.4099999964237213 4966 3633 8600 DOHH2_400M_050219_2,8601 DOHH2_400M_050219_2,8601,SLSTFQQMW False False SLSTFQQMW 49.153606 572.260424792767 912662.1875 8600.0 ENSG00000188219|ENST00000683005|POTEE;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;;ENSG00000222038|ENST00000409602|POTEJ;;ENSG00000169067|ENST00000423391|ACTBL2;;ENSG00000163017|ENST00000345517|ACTG2;;ENST00000428275.1_1_X:53172047-53172134:-|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000075624|ENST00000646664|ACTB;;ENSG00000196604|ENST00000409914|POTEF;;ENSG00000107796|ENST00000224784|ACTA2;;ENSG00000159251|ENST00000290378|ACTC1;;ENSG00000196834|ENST00000451531|POTEI;;ENSG00000184009|ENST00000573283|ACTG1;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF 1.863009462753932 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8602 49.159 272.0 266550.0 25 0 27859.0 + 36867 TENDIRVMF 9 92 562.7736526109421 1123.5327522886842 2 562.7740356326103 MULTI CID FTMS 0 0 0 8600 251507.015625 0.3414676206675489 -5 0.2724571228027344 2 Unmodified _TENDIRVMF_ ENSG00000149187|ENST00000687097|CELF1;ENST00000422993.2_1_11:47504376-47508350:-|nuORF;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1 70.33199760932243 0.0209706178985989 2 {[ET]|[MV]}ND{I|L}RVM{M(Oxidation (M))|F} 9 0 + 56.845 0.0 0.0 5.0595 5.0595 85.363 0.0 0.0 0.0 0.6424927368725974 31.91885526238913 0.6424927368725974 10.440680443502757 0 2.667735320183944 0.0 0.2742275032520141 0.7302046884880937 + + {[ET]|[MV]}ND{I|L}RVM{M(Oxidation (M))|F};[QT]DD{I|L}RVM{M(Oxidation (M))|F};[DN]{[ET]|[MV]}{I|L}RVM{M(Oxidation (M))|F};{[SA]|[TG]}ADD{I|L}RVM{M(Oxidation (M))|F} 5.0595;4.1302;3.4843;3.2391 +;-;-;- + 246 1 1.995 61969.9 1.0 4967 3633 8600 DOHH2_400M_050219_2,8602 DOHH2_400M_050219_2,8602,TENDIRVMF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8603 49.168 561.0 163160.0 25 0 16507.0 + -1 VMAPRTLLL 9 106 515.3103105225159 1028.6060681118315 2 515.3099853396416 MULTI CID FTMS 0 0 0 8600 136365.390625 0.9186890284821037 -4 0.2145423889160156 3 Oxidation (M) _VM(Oxidation (M))APRTLLL_ ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 29.84058131909904 0.1515068451768857 2 AD{I|L} 3 -1 38.698 0.0 0.0 3.7622 0.0 0.0 711.4633735218965 0.0 711.4633735218965 0.0 21.70818753952375 0.0 0.0 0 1.25 0.0 0.0 0.0 AD{I|L} 3.7622 - 88 1 1.995 70441.1 1.0 4968 3633 8600 DOHH2_400M_050219_2,8603 DOHH2_400M_050219_2,8603,VMAPRTLLL False False VMAPRTLLL 49.168477 515.309985339642 1033461.5625 8600.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 4.217034975687663 2.0 True 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8606 49.189 800.0 38292.0 25 0 8424.3 26349 NSHLIVHKRIH 11 66 451.93273685368064 1352.776381161242 3 451.9326354861259 MULTI CID FTMS 0 0 0 8605 81055.0625 0.6659645239932268 -1 0.0040664672851562 1 Unmodified _NSHLIVHKRIH_ ENSG00000166704|ENST00000551380|ZNF606 1.1933415558491238 0.8695176722560516 2 C(Carbamidomethyl (C)) 1 11 0.71334 0.0 0.0 0.052731 0.0 0.0 1036.6592374618265 153.0561922662719 1189.715429728098 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.052731 - 1 + 1 1.995 36853.5 0.3499999940395355 4969 3635 8605 DOHH2_400M_050219_2,8606 DOHH2_400M_050219_2,8606,NSHLIVHKRIH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8607 49.202 744.0 248460.0 25 0 54188.0 + 24020 LVYGRGPA 8 113 416.7371236531689 831.4596943731378 2 416.7371398806572 MULTI CID FTMS 0 0 0 8605 105967.53125 1.0 0 0.0 2 Unmodified _LVYGRGPA_ REV__ENST00000496202.5_1_1:150297400-150300075:+|nuORF 13.50788311687929 0.7113601687236069 2 {I|L}YV 3 -1 43.188 0.0 0.0 5.1942 0.0 0.0 0.0 453.2218583290066 453.2218583290066 12.213403050078782 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}YV 5.1942 - 162 + 1 1.995 145872.2 1.0 4970 3635 8605 DOHH2_400M_050219_2,8607 DOHH2_400M_050219_2,8607,LVYGRGPA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8609 49.207 114.0 247950.0 25 0 78868.0 + 28984 QDRPKERLRR 10 48 677.3959595610053 1352.7773661888104 2 677.3956176638603 MULTI CID FTMS 0 0 0 8608 430444.40625 0.8692563282441992 3 -0.0991363525390625 1 Unmodified _QDRPKERLRR_ REV__ENSG00000104365|ENST00000520810|IKBKB;REV__ENST00000342222.6_1_8:42151073-42188494:+|nuORF;REV__nc|ENSG00000104365|O14920-2|IKBKB;REV__nc|ENSG00000104365|O14920-4|IKBKB 0.4583401331227399 0.7245164002484112 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.995 34169.7 1.0 4971 3636 8608 DOHH2_400M_050219_2,8609 DOHH2_400M_050219_2,8609,QDRPKERLRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8610 49.221 800.0 107120.0 25 0 9893.9 + 7243 EESFSEHLGF 10 116 591.2591935423247 1180.5038341514494 2 591.2593261599541 MULTI CID FTMS 0 0 0 8608 94886.390625 0.7299240444861261 -2 0.0333137512207031 2 Unmodified _EESFSEHLGF_ ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 64.23631603340823 0.0254735623525308 2 EES{M(Oxidation (M))|F}[HV]V{M(Oxidation (M))|F}S 9 5 58.533 0.0 0.0 4.9583 0.0 0.0 0.0 116.0510042779906 116.0510042779906 29.34698085914832 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 1.363364334130467 0.0 EES{M(Oxidation (M))|F}[HV]V{M(Oxidation (M))|F}S 4.9583 - 1470 + 1 1.995 67582.4 0.4300000071525574 4972 3636 8608 DOHH2_400M_050219_2,8610 DOHH2_400M_050219_2,8610,EESFSEHLGF True True EESFSEHLGF 49.220722 591.259326159954 702007.5 8608.0 ENST00000591595.5_1_19:11130023-11172489:+|nuORF;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;;ENSG00000127616|ENST00000344626|SMARCA4;;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 8.266539255777994 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8611 49.235 800.0 41918.0 25 0 4428.4 -1 0 47 807.4031141046548 3225.583350552219 4 808.1551391482353 MULTI CID FTMS 0 0 0 8608 66786.6640625 0.8259407260694186 -3 0.0658950805664062 3 2 VM[EP] 4 -1 13.188 0.0 0.0 0.40884 0.0 0.0 2751.339535135832 0.0 2751.339535135832 0.0 10.713337517843655 0.0 0.0 0 0.0 0.0 0.0 0.0 VM[EP] 0.40884 - 12 1 1.995 34485.3 0.3300000131130218 4973 3636 8608 DOHH2_400M_050219_2,8611 DOHH2_400M_050219_2,8611, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8613 49.245 369.0 257990.0 25 0 21544.0 + 6442 EAEPHPLWEY 10 90 635.7904573439066 1269.5663617546131 2 635.7904540896416 MULTI CID FTMS 0 0 0 8612 303321.5 0.4079853812238307 7 -0.14093017578125 1 Unmodified _EAEPHPLWEY_ ENSG00000132600|ENST00000441236|PRMT7;ENST00000568463.1_1_16:68389580-68391124:+|nuORF;ENST00000568975.5_1_16:68386292-68391124:+|nuORF;nc|ENSG00000132600|Q9NVM4-2|PRMT7;nc|ENSG00000132600|Q9NVM4-3|PRMT7 63.22749603027936 0.0281198777558511 2 W{[ET]|[MV]}P{I|L}G{M(Oxidation (M))|F}EY 9 6 43.858 0.0 0.0 3.4545 0.0 0.0 129.04309279609532 0.0 129.04309279609532 0.0 25.01464616121425 0.0 0.0 0 0.8252574989159953 0.0 1.0 0.0 W{[ET]|[MV]}P{I|L}G{M(Oxidation (M))|F}EY 3.4545 - 714 1 1.995 73893.7 1.0 4974 3637 8612 DOHH2_400M_050219_2,8613 DOHH2_400M_050219_2,8613,EAEPHPLWEY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8614 49.246 53.0 935870.0 25 0 106470.0 + 15062 IMGLILKR 8 67 472.309526156701 942.604499380202 2 472.3096496462822 MULTI CID FTMS 0 0 0 8612 679352.375 0.8779194215974078 -1 0.0327568054199218 2 Unmodified _IMGLILKR_ REV__ENST00000377861.4_3_13:67779735-67779861:-|nuORF 32.116972079565 0.368454113111938 2 M{I|L}G{I|L}K 5 -1 59.553 0.0 0.0 6.3179 0.0 0.0 0.0 397.25324426822505 397.25324426822505 44.49092531119419 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 M{I|L}G{I|L}K 6.3179 - 79 + 1 1.995 47068.0 1.0 4975 3637 8612 DOHH2_400M_050219_2,8614 DOHH2_400M_050219_2,8614,IMGLILKR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8615 49.257 631.0 76442.0 25 0 20855.0 + 16854 KIEIREVKIGW 11 59 685.9091083889856 1369.803663844771 2 685.9085571169853 MULTI CID FTMS 0 0 0 8612 145718.9375 0.8642215695933771 4 -0.1138648986816406 3 Unmodified _KIEIREVKIGW_ REV__ENSG00000116218|ENST00000367615|NPHS2;REV__nc|ENSG00000116218|Q9NP85-2|NPHS2 1.1933415558491238 0.8695176722560516 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 48510.8 1.0 4976 3637 8612 DOHH2_400M_050219_2,8615 DOHH2_400M_050219_2,8615,KIEIREVKIGW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8616 49.268 607.0 102350.0 25 0 8989.4 + 4727 DEEETYRLW 9 70 620.7773557767256 1239.540158620251 2 620.7776977419853 MULTI CID FTMS 0 0 0 8612 112568.203125 0.552851634463258 -8 0.3131942749023437 4 Unmodified _DEEETYRLW_ ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1095212-1095344:-|nuORF;ENST00000592597.1_1_19:1093873-1095344:-|nuORF 72.96794272382148 0.0199516581995792 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EETYR{I|L}W 9 0 + 80.143 0.0 0.0 6.4656 6.4656 91.4 0.0 0.0 0.0 60.30008452963798 13.46787486224656 13.46787486224656 14.208187539523747 0 1.805462187404089 0.0 0.8494850021680094 0.5 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EETYR{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EETY[VG]{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[DP]YR{I|L}W;{[{M(Oxidation (M))|F}D]|MM}[HC]TYR{I|L}W;{[{M(Oxidation (M))|F}D]|MM}E[DP]YR{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[DP]Y[VG]{I|L}W;{[{M(Oxidation (M))|F}D]|MM}[HC]TY[VG]{I|L}W;{[{M(Oxidation (M))|F}D]|MM}E[DP]Y[VG]{I|L}W;EE[YT]R{[VA]|[{I|L}G]}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};EE[YT]R[W{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.4656;5.3193;4.2068;3.5215;3.2786;3.0606;2.3752;2.1324;1.0656;0.78146 +;-;-;-;-;-;-;-;-;- + 143 + 1 1.995 50841.1 1.0 4977 3637 8612 DOHH2_400M_050219_2,8616 DOHH2_400M_050219_2,8616,DEEETYRLW True True DEEETYRLW 49.268078 620.777697741985 1374626.25 8612.0 ENST00000586817.5_1_19:1095212-1095344:-|nuORF;;ENST00000592597.1_1_19:1093873-1095344:-|nuORF;;ENSG00000099817|ENST00000615234|POLR2E 7.731106599171956 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8618 49.273 27.0 4007900.0 25 0 665220.0 + -1 VMILMLVLL 9 76 538.8268691261638 1075.6391853191276 2 538.8269531130791 MULTI CID FTMS 0 0 0 8617 4256814.5 0.7842026842380919 2 -0.0598945617675781 1 2 Oxidation (M) _VM(Oxidation (M))ILM(Oxidation (M))LVLL_ REV__ENSG00000112195|ENST00000483722|TREML2 28.17323086031832 0.1727213568982648 2 [{M(Oxidation (M))|F}V]{I|L}PV{I|L}Y{I|L}{I|L} 9 -1 + 48.65 0.0 0.0 4.5229 4.5229 74.014 0.0 0.0 0.0 1.0822685886482477 37.68114684785509 1.0822685886482477 3.0102999566398125 0 0.8807196863200843 0.0 0.0 0.0 [{M(Oxidation (M))|F}V]{I|L}PV{I|L}Y{I|L}{I|L};[{M(Oxidation (M))|F}V]{I|L}PVY{I|L}{I|L}{I|L};[{M(Oxidation (M))|F}V]{I|L}P{I|L}VY{I|L}{I|L};[{M(Oxidation (M))|F}V]{I|L}PYV{I|L}{I|L}{I|L};[{M(Oxidation (M))|F}V]{I|L}PV{I|L}{I|L}Y{I|L};[{M(Oxidation (M))|F}V]{I|L}PY{I|L}V{I|L}{I|L};[{M(Oxidation (M))|F}V]{I|L}P{I|L}YV{I|L}{I|L};[{M(Oxidation (M))|F}V]{I|L}P{I|L}V{I|L}Y{I|L} 4.5229;4.2431;4.0793;3.7995;3.6145;3.5196;3.5196;3.1709 -;-;-;-;-;-;-;- 211 1 1.995 87092.2 1.0 4978 3638 8617 DOHH2_400M_050219_2,8618 DOHH2_400M_050219_2,8618,VMILMLVLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8619 49.287 800.0 103540.0 25 0 8706.5 + 640 AELGGLLKY 9 103 482.2788259980439 962.5430990628878 2 482.2790710330009 MULTI CID FTMS 0 0 0 8617 115490.8359375 0.8762086907784639 -3 0.0955276489257812 2 Unmodified _AELGGLLKY_ ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11 41.8396318013385 0.0653578398400075 2 {[CP]|[EA]}{I|L}GG{I|L}{I|L}KY 9 0 + 44.662 0.0 0.0 4.64 4.64 78.349 0.0 0.0 0.0 31.597652991372843 12.587418566968154 12.587418566968154 6.478174818886373 0 1.3569758080123702 0.0 0.0 0.0 + + {[CP]|[EA]}{I|L}GG{I|L}{I|L}KY;{[CP]|[EA]}{I|L}N{I|L}{I|L}KY 4.64;3.967 +;- + 141 + 1 1.995 65961.3 0.4199999868869781 4979 3638 8617 DOHH2_400M_050219_2,8619 DOHH2_400M_050219_2,8619,AELGGLLKY True True AELGGLLKY 49.287095 482.279071033001 634158.5625 8617.0 ENSG00000108671|ENST00000261712|PSMD11;;nc|ENSG00000108671|O00231-2|PSMD11 5.498347918192546 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8620 49.301 800.0 92710.0 25 0 12852.0 + 30589 REVEVVPSNMW 11 69 673.3324114737967 1344.6502700143933 2 673.3318359255791 MULTI CID FTMS 0 0 0 8617 81696.421875 0.9724227010238335 -9 0.3467178344726562 3 Unmodified _REVEVVPSNMW_ ENSG00000114745|ENST00000319283|GORASP1;ENST00000441302.6_1_3:39142056-39149053:-|nuORF;ENST00000470910.5_1_3:39142410-39149053:-|nuORF;ENST00000493851.5_1_3:39143979-39149053:-|nuORF;nc|ENSG00000114745|Q9BQQ3-2|GORASP1;nc|ENSG00000114745|Q9BQQ3-3|GORASP1 44.391923383255 0.1486875248750151 2 [PS]N[KS]VV[PS]NMW 12 5 + 67.959 0.0 0.0 5.054 5.054 75.417 0.0 0.0 0.0 2.398790645499446 16.611814434466197 2.398790645499446 2.398790645499446 0 1.7302046884880935 0.0 1.110924374808178 0.6694451763165201 [PS]N[KS]VV[PS]NMW;[NS]P[KS]VV[PS]NMW;[PS]N[KS]V[WP]NM[VS];[NS]P[KS]V[WP]NM[VS];[PS]NM[KP][Q{I|L}]NM[VS];[PS]NM[KP][K{I|L}]NM{[DA]|[EG]};[NS]PM[KP][K{I|L}]NM{[DA]|[EG]};[NS]PM[KP][Q{I|L}]NM[VS] 5.054;4.8756;3.5116;3.3332;2.6091;2.6091;2.4307;2.4307 -;-;-;-;-;-;-;- 220 1 1.995 59562.4 0.3300000131130218 4980 3638 8617 DOHH2_400M_050219_2,8620 DOHH2_400M_050219_2,8620,REVEVVPSNMW False True REVEVVPSNMW 49.300932 673.331835925579 586320.625 8617.0 ENST00000470910.5_1_3:39142410-39149053:-|nuORF;;nc|ENSG00000114745|Q9BQQ3-2|GORASP1;;ENSG00000114745|ENST00000319283|GORASP1;;nc|ENSG00000114745|Q9BQQ3-3|GORASP1;;ENST00000493851.5_1_3:39143979-39149053:-|nuORF;;ENST00000441302.6_1_3:39142056-39149053:-|nuORF 7.71577262878418 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8622 49.309 279.0 181020.0 25 0 27177.0 + 20641 LLPSHPLEL 9 79 509.7986057043217 1017.5826584754434 2 509.8002807497978 MULTI CID FTMS 0 0 0 8621 103432.4609375 0.4719106454255658 2 -0.0474853515625 1 Unmodified _LLPSHPLEL_ ENSG00000132963|ENST00000380842|POMP 28.486842064014134 0.1687311288560894 2 {I|L}{I|L}[C(Carbamidomethyl (C))Q]{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 8 6 + 38.645 0.0 0.0 3.7977 3.7977 73.332 0.0 0.0 0.0 3.519374645445623 10.929862658764264 3.519374645445623 4.581662565709543 0 0.5 2.0 0.0 0.0 {I|L}{I|L}[C(Carbamidomethyl (C))Q]{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{I|L}{I|L}[PS]H[{I|L}P]E{I|L};{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RN{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{I|L}{I|L}[R{I|L}]{[{M(Oxidation (M))|F}D]|MM}E{I|L};{I|L}{I|L}[PS]H[KQ][VP];{I|L}{I|L}[R{I|L}][NS][R{M(Oxidation (M))|F}];[{I|L}T]{[WN]|[YH]}{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{I|L}T][KQ]RN{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 3.7977;3.3475;2.8595;2.3492;2.2495;1.6423;1.2068;0.26854 -;+;-;-;-;-;-;- + 122 1 1.995 45773.4 1.0 4981 3639 8621 DOHH2_400M_050219_2,8622 DOHH2_400M_050219_2,8622,LLPSHPLEL False True LLPSHPLEL 49.308605 509.800280749798 2214722.75 8621.0 ENSG00000132963|ENST00000380842|POMP 4.603903452555339 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8623 49.314 302.0 124200.0 25 0 12776.0 + 353 AEASVDPSLSW 11 85 581.2745745214505 1160.534596109701 2 581.2745849490166 MULTI CID FTMS 0 0 0 8621 123751.4453125 0.2915558926733448 -15 0.5235595703125 2 Unmodified _AEASVDPSLSW_ ENSG00000132467|ENST00000254803|UTP3 27.628801355627647 0.4434699450731472 2 DSW 3 8 21.925 0.0 0.0 1.8892 0.0 0.0 754.389040545051 0.0 754.389040545051 0.0 4.34472017591597 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 DSW 1.8892 - 146 + 1 1.995 34228.3 1.0 4982 3639 8621 DOHH2_400M_050219_2,8623 DOHH2_400M_050219_2,8623,AEASVDPSLSW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8624 49.328 800.0 46677.0 25 0 13192.0 + 40332 VHKWFINRLTK 11 56 721.4219389747743 1440.8293250163483 2 721.4218017458916 MULTI CID FTMS 0 0 0 8621 81459.59375 0.7521031030841857 -3 0.0991363525390625 3 Unmodified _VHKWFINRLTK_ REV__ENST00000452825.7_2_X:53221315-53221459:-|nuORF 0.4545168274142398 0.8730034954726786 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 38210.3 0.3899999856948852 4983 3639 8621 DOHH2_400M_050219_2,8624 DOHH2_400M_050219_2,8624,VHKWFINRLTK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8626 49.334 76.0 462220.0 25 0 107330.0 + -1 VMILMLVLL 9 53 359.55364384236424 1075.6391021272927 3 359.5535156130791 MULTI CID FTMS 0 0 0 8625 680636.25 0.4497623732787581 4 -0.0475120544433593 1 2 Oxidation (M) _VM(Oxidation (M))ILM(Oxidation (M))LVLL_ REV__ENSG00000112195|ENST00000483722|TREML2 13.90604991867851 0.4602628045680013 2 {I|L}PY{I|L}{I|L}{I|L} 6 -1 22.128 0.0 0.0 2.0572 0.0 0.0 345.19053847480626 0.0 345.19053847480626 0.0 7.523656471886326 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 {I|L}PY{I|L}{I|L}{I|L} 2.0572 - 67 1 1.995 33489.6 1.0 4984 3640 8625 DOHH2_400M_050219_2,8626 DOHH2_400M_050219_2,8626,VMILMLVLL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8627 49.336 140.0 231070.0 25 0 69934.0 -1 LTVFCGMLM 9 60 536.2550088480788 1070.4954647629577 2 536.2556640505791 MULTI CID FTMS 0 0 0 8625 328979.53125 0.3287970899647058 5 -0.0515785217285156 2 Carbamidomethyl (C) _LTVFC(Carbamidomethyl (C))GMLM_ ENSG00000138698|ENST00000408927|RAP1GDS1;ENST00000503745.1_1_4:99273670-99308609:+|nuORF;ENST00000505378.5_1_4:99182716-99313239:+|nuORF;ENST00000507303.5_1_4:99182716-99313239:+|nuORF;ENST00000511379.5_1_4:99182716-99300325:+|nuORF;nc|ENSG00000138698|P52306-4|RAP1GDS1;nc|ENSG00000138698|P52306-5|RAP1GDS1 16.942295170755138 0.3780752226737986 2 [YV]MMRR{[ES]|[DT]|[{I|L}C]} 8 -1 + 30.379 0.0 0.0 2.8379 2.8379 67.66 0.0 0.0 0.0 6.989700043360188 1.9576404378418744 1.9576404378418744 1.9576404378418744 0 0.5 0.0 1.3494850021680094 0.0 [YV]MMRR{[ES]|[DT]|[{I|L}C]};[WD]VKMM[YV];[{I|L}T][WQ]MM[YV] 2.8379;2.655;0.84086 -;-;- 74 + 1 1.995 35342.6 1.0 4985 3640 8625 DOHH2_400M_050219_2,8627 DOHH2_400M_050219_2,8627,LTVFCGMLM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8628 49.343 385.0 192670.0 25 0 30385.0 + 30197 QVVKIKKSY 9 92 546.8408156109135 1091.667078288627 2 546.8415405154228 MULTI CID FTMS 0 0 0 8625 169788.015625 0.5880931204505915 -5 0.1554222106933593 3 Unmodified _QVVKIKKSY_ REV__ENST00000460138.5_1_6:7881773-7881830:-|nuORF 2.059750862983233 0.8427793054688888 2 SW 2 -1 16.198 0.0 0.0 1.4838 0.0 0.0 800.5451928248691 0.0 800.5451928248691 0.0 5.601955544287893 0.0 0.0 0 0.0 0.0 0.0 0.0 SW 1.4838 - 58 + 1 1.995 63249.4 1.0 4986 3640 8625 DOHH2_400M_050219_2,8628 DOHH2_400M_050219_2,8628,QVVKIKKSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8629 49.348 275.0 181060.0 25 0 12593.0 + 11234 GEQGYIRLI 9 81 524.7929204098224 1047.571287886445 2 524.7932617068291 MULTI CID FTMS 0 0 0 8625 158945.484375 0.6345457234533897 3 -0.0434532165527343 4 Unmodified _GEQGYIRLI_ ENSG00000197329|ENST00000358912|PELI1 47.74868867922204 0.0453060283459952 2 {[DA]|[EG]}QGY{I|L}R{I|L}{I|L} 9 0 + 73.84 0.0 0.0 7.0487 7.0487 90.636 0.0 0.0 0.0 19.643871731781744 9.710536658395128 9.710536658395128 9.208187539523747 0 1.305462187404089 2.0 0.0 0.3494850021680094 + + {[DA]|[EG]}QGY{I|L}R{I|L}{I|L};{[DA]|[EG]}[AG]GY{I|L}R{I|L}{I|L} 7.0487;6.1697 +;- + 96 + 1 1.995 42598.1 1.0 4987 3640 8625 DOHH2_400M_050219_2,8629 DOHH2_400M_050219_2,8629,GEQGYIRLI True True GEQGYIRLI 49.348413 524.793261706829 1328595.25 8625.0 ENSG00000197329|ENST00000358912|PELI1 6.352262020111084 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8632 49.357 106.0 524100.0 25 0 36246.0 + 6896 EEFDARWVTY 10 70 658.3013959414446 1314.5882389496892 2 658.3013793826103 MULTI CID FTMS 0 0 0 8631 550096.3125 0.4566567022250022 5 -0.0350265502929687 1 Unmodified _EEFDARWVTY_ ENSG00000178741|ENST00000322347|COX5A 59.17704102725264 0.0387449460849098 2 EE{M(Oxidation (M))|F}DAQ 6 5 41.432 0.0 0.0 3.1517 0.0 0.0 0.0 592.3006075494749 592.3006075494749 4.599009323677095 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 EE{M(Oxidation (M))|F}DAQ 3.1517 - 296 + 1 1.995 46713.0 1.0 4988 3642 8631 DOHH2_400M_050219_2,8632 DOHH2_400M_050219_2,8632,EEFDARWVTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8633 49.371 800.0 83947.0 25 0 7752.5 + 40467 VINPEPITL 9 91 498.2919627402312 994.5693725472624 2 498.2912170290947 MULTI CID FTMS 0 0 0 8631 85540.5078125 0.6152910936868683 -14 0.4890403747558594 2 Unmodified _VINPEPITL_ ENSG00000108021|ENST00000695737|TASOR2 46.020951573049366 0.0490941689151868 2 [{I|L}V]N[EP]P 6 3 32.197 0.0 0.0 3.2372 0.0 0.0 0.0 342.20447931899986 342.20447931899986 10.179877482601078 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.3054621874040891 + [{I|L}V]N[EP]P 3.2372 + + 410 1 1.995 56236.1 0.4000000059604645 4989 3642 8631 DOHH2_400M_050219_2,8633 DOHH2_400M_050219_2,8633,VINPEPITL True True VINPEPITL 49.371394 498.291217029095 891296.9375 8631.0 ENSG00000108021|ENST00000695737|TASOR2 5.256273110707601 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8642 49.406 180.0 302120.0 25 0 30798.0 + 36868 TENDIRVMF 9 79 562.7736526109421 1123.5327522886842 2 562.7740356326103 MULTI CID FTMS 0 0 0 8641 330112.15625 0.4481887404532381 12 -0.2055931091308593 1 Unmodified _TENDIRVMF_ ENSG00000149187|ENST00000687097|CELF1;ENST00000422993.2_1_11:47504376-47508350:-|nuORF;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1 45.739877483867886 0.0497104363764649 2 TEND{I|L}RVM{M(Oxidation (M))|F} 9 0 + 93.594 0.0 0.0 8.3303 8.3303 92.834 0.0 0.0 0.0 82.1736794668258 14.973024840566469 14.973024840566469 9.208187539523747 0 1.8182503180159344 2.0 0.0 0.3807196863200844 + + TEND{I|L}RVM{M(Oxidation (M))|F};TEGGD{I|L}RVM{M(Oxidation (M))|F};{[ET]|[MV]}ND{I|L}RVM{M(Oxidation (M))|F};[PS][WK]{[ET]|[MV]}VM{M(Oxidation (M))|F} 8.3303;7.5107;2.374;0.56371 +;-;+;- + 66 + 1 1.995 49000.5 1.0 4990 3650 8641 DOHH2_400M_050219_2,8642 DOHH2_400M_050219_2,8642,TENDIRVMF True True TENDIRVMF 49.405567 562.77403563261 8912574.0 8641.0 ENST00000422993.2_1_11:47504376-47508350:-|nuORF;;nc|ENSG00000149187|Q92879-6|CELF1;;nc|ENSG00000149187|Q92879-4|CELF1;;nc|ENSG00000149187|Q92879|CELF1;;ENSG00000149187|ENST00000687097|CELF1;;nc|ENSG00000149187|Q92879-3|CELF1;;nc|ENSG00000149187|Q92879-5|CELF1;;nc|ENSG00000149187|Q92879-2|CELF1 6.98437515894572 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8646 49.424 427.0 193420.0 25 0 16053.0 + 547 AEIEIVKDL 9 114 515.2944737480676 1028.5743945629351 2 515.2932006716728 MULTI CID FTMS 0 0 0 8645 91496.6015625 0.1053289601724466 -8 0.0340042114257812 1 Unmodified _AEIEIVKDL_ ENSG00000122884|ENST00000394890|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1;nc|ENSG00000122884|P13674-3|P4HA1 41.95555342248728 0.0647214845423414 2 {[CP]|[EA]}{I|L}E{I|L}V 6 3 36.744 0.0 0.0 3.5723 0.0 0.0 0.0 371.19384546113344 371.19384546113344 7.391143015546646 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.3807196863200844 0.0 + {[CP]|[EA]}{I|L}E{I|L}V 3.5723 + + 327 + 1 1.995 67363.3 1.0 4991 3653 8645 DOHH2_400M_050219_2,8646 DOHH2_400M_050219_2,8646,AEIEIVKDL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8647 49.438 800.0 105620.0 25 0 11288.0 + 566 AEIIKNDLW 9 116 551.3007845493311 1100.587016165462 2 551.3005859255791 MULTI CID FTMS 0 0 0 8645 100009.890625 0.749807353711238 -1 0.0040664672851562 2 Unmodified _AEIIKNDLW_ ENSG00000184205|ENST00000375442|TSPYL2;ENST00000553557.5_1_X:53113753-53114504:+|nuORF 34.93206674587334 0.1032771302489716 2 {[CP]|[EA]}AAK{I|L}{[CP]|[EA]}{I|L}W 10 5 + 42.937 0.0 0.0 3.9013 3.9013 71.764 0.0 0.0 0.0 3.99166239860314 13.244171855527966 3.99166239860314 3.0102999566398125 0 0.805462187404089 0.0 0.0 1.1237125054200234 {[CP]|[EA]}AAK{I|L}{[CP]|[EA]}{I|L}W;{[CP]|[EA]}AAK{I|L}{I|L}{[CP]|[EA]}W;[TA]{[QG]|[NA]}{I|L}{I|L}{[CP]|[EA]}{I|L}W;{[CP]|[EA]}AAK{I|L}K{[QG]|[NA]}W;[TA]{[QG]|[NA]}{I|L}{I|L}{I|L}{[CP]|[EA]}W;[K{I|L}][DN]{I|L}{[CP]|[EA]}{I|L}W;[PG]{[MG]|[TS]}K{I|L}{[CP]|[EA]}{I|L}W;[MT][TA]{I|L}{I|L}{I|L}{[QG]|[NA]}[PG];[K{I|L}][DN]{I|L}{I|L}{[CP]|[EA]}W;[PG]{[MG]|[TS]}K{I|L}{I|L}{[CP]|[EA]}W 3.9013;3.6278;3.5381;3.4678;3.2646;2.7618;2.7475;2.5247;2.4883;2.474 -;-;-;-;-;-;-;-;-;- 402 1 1.995 67616.8 0.4300000071525574 4992 3653 8645 DOHH2_400M_050219_2,8647 DOHH2_400M_050219_2,8647,AEIIKNDLW True True AEIIKNDLW 49.437538 551.300585925579 822796.4375 8645.0 ENST00000553557.5_1_X:53113753-53114504:+|nuORF;;ENSG00000184205|ENST00000375442|TSPYL2 4.862204074859619 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8650 49.458 800.0 107360.0 25 0 10221.0 + -1 QDLLSCTEDTQ 11 110 655.2812486447458 1308.5479443562915 2 655.2814819216728 MULTI CID FTMS 0 0 0 8649 102466.1875 0.9618096436074688 1 -0.0163764953613281 1 Carbamidomethyl (C) _QDLLSC(Carbamidomethyl (C))TEDTQ_ REV__ENSG00000111860|ENST00000368491|CEP85L;REV__nc|ENSG00000111860|Q5SZL2-4|CEP85L 33.4449034751529 0.3133739643825231 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}D{I|L} 6 -1 46.203 0.0 0.0 3.5309 0.0 0.0 0.0 608.1589245735522 608.1589245735522 20.568109453757657 0.0 0.0 0.0 0 1.0 0.0 1.2302046884880935 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}D{I|L} 3.5309 - 235 + 1 1.995 75803.4 0.4399999976158142 4993 3655 8649 DOHH2_400M_050219_2,8650 DOHH2_400M_050219_2,8650,QDLLSCTEDTQ False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8652 49.469 473.0 108050.0 25 0 34347.0 35175 SRSRHRRRSR 10 69 677.3959595610053 1352.7773661888104 2 677.3950683474541 MULTI CID FTMS 0 0 0 8651 221442.171875 0.447189013139797 23 -0.6430587768554688 1 Unmodified _SRSRHRRRSR_ ENSG00000179335|ENST00000395066|CLK3;ENST00000454830.6_1_15:74908152-74912599:+|nuORF;nc|ENSG00000179335|P49761-2|CLK3;nc|ENSG00000179335|P49761-3|CLK3 1.4819007175156935 0.719781833666733 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 53443.5 1.0 4994 3656 8651 DOHH2_400M_050219_2,8652 DOHH2_400M_050219_2,8652,SRSRHRRRSR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8653 49.481 680.0 127300.0 25 0 10014.0 + 329 AEAFEAIPRAL 11 101 594.3247806627512 1186.6350083923023 2 594.3252441287041 MULTI CID FTMS 0 0 0 8651 104080.65625 0.788553759389818 -3 0.0442657470703125 2 Unmodified _AEAFEAIPRAL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000413611.2_1_1:146675128-146675437:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 61.08992128646608 0.0647217981198246 2 {[CP]|[EA]}A{M(Oxidation (M))|F}EA{I|L}P 8 3 60.482 0.0 0.0 5.097 0.0 0.0 0.0 355.2088411920532 355.2088411920532 48.69972002775802 0.0 0.0 0.0 0 1.960409376976188 0.0 0.4247425010840047 0.0 + {[CP]|[EA]}A{M(Oxidation (M))|F}EA{I|L}P 5.097 + + 282 + 1 1.995 69958.4 1.0 4995 3656 8651 DOHH2_400M_050219_2,8653 DOHH2_400M_050219_2,8653,AEAFEAIPRAL True True AEAFEAIPRAL 49.480581 594.325244128704 625060.625 8651.0 nc|ENSG00000156261|P50990-3|CCT8;;ENST00000413611.2_1_1:146675128-146675437:-|nuORF;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 6.885332902272542 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8656 49.5 741.0 82282.0 25 0 10318.0 + 347 AEAQQLITI 9 98 493.7792661988076 985.5439794644152 2 493.7796203494072 MULTI CID FTMS 0 0 0 8655 103248.15625 1.0 0 0.0 1 Unmodified _AEAQQLITI_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 27.628801355627647 0.1796483985696185 2 QQA{I|L}AE{I|L}T{I|L} 9 5 QQA{I|L}AE{I|L} + + 21.211 24.001 3.1857 2.1523 2.1523 47.611 0.0 0.0 0.0 0.0 -7.552040273902637 -7.552040273902637 0.0 0 0.0 0.0 0.3252574989159953 0.0 QQA{I|L}AE{I|L}T{I|L} 2.1523 - 210 + 1 1.995 52788.2 1.0 4996 3658 8655 DOHH2_400M_050219_2,8656 DOHH2_400M_050219_2,8656,AEAQQLITI False True AEAQQLITI 49.500029 493.779620349407 595213.9375 8655.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 4.073395411173503 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8657 49.511 649.0 175920.0 25 0 10654.0 34195 SLNRHSQNIW 10 126 418.8841659455437 1253.6306684368312 3 418.8841125369072 MULTI CID FTMS 0 0 0 8655 92234.3125 0.3667377176174818 -3 0.0432205200195312 2 Unmodified _SLNRHSQNIW_ ENST00000467303.5_1_3:197431537-197476242:-|nuORF 13.90604991867851 0.6142120002215601 2 Q{[MS]|[{M(Oxidation (M))|F}A]}WN{I|L}W 7 6 20.916 0.0 0.0 1.6684 0.0 0.0 290.1882191388688 0.0 290.1882191388688 0.0 7.421072761503851 0.0 0.0 0 0.4929928190999391 0.0 0.0 1.0 Q{[MS]|[{M(Oxidation (M))|F}A]}WN{I|L}W 1.6684 - 292 1 1.995 94973.5 1.0 4997 3658 8655 DOHH2_400M_050219_2,8657 DOHH2_400M_050219_2,8657,SLNRHSQNIW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8659 49.521 389.0 177340.0 25 0 17846.0 + + 24573 MLGLKRLL 8 93 472.309526156701 942.604499380202 2 472.3097411990166 MULTI CID FTMS 0 0 0 8658 122343.4921875 0.1581031168065865 21 -0.6209373474121094 1 Unmodified _MLGKLRII_ ENST00000589878.5_1_19:34663429-34663453:+|nuORF 24.67388899826682 0.525179942228231 2 M{I|L}G{I|L}K 5 -1 61.058 0.0 0.0 6.4776 0.0 0.0 0.0 397.25751672916255 397.25751672916255 48.35470640367888 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 M{I|L}G{I|L}K 6.4776 - 132 + 1 1.995 57110.1 1.0 4998 3659 8658 DOHH2_400M_050219_2,8659 DOHH2_400M_050219_2,8659,MLGKLRII False False MLGLKRLL 49.520823 472.309741199017 7903038.0 8658.0 ENST00000589878.5_1_19:34663429-34663453:+|nuORF 1.7762943108876543 2.0 False 8.0 True nuORF PXD020620_cell_line DOHH2_400M_050219_2 8660 49.532 628.0 101650.0 25 0 7619.4 + 10519 FVDPAQITM 9 104 511.25435411491566 1020.4941552966312 2 511.2540161013603 MULTI CID FTMS 0 0 0 8658 88364.765625 0.5121940019990197 -3 0.0535049438476562 2 Unmodified _FVDPAQITM_ ENSG00000167325|ENST00000300738|RRM1 29.081581746732265 0.1611639662936252 2 [{I|L}T]{M(Oxidation (M))|F}PAQ{I|L}TM 9 3 + 42.641 0.0 0.0 4.1784 4.1784 71.647 0.0 0.0 0.0 2.260907710730578 2.9870589449144163 2.260907710730578 2.260907710730578 0 0.8182503180159344 1.0969100130080565 0.2396518287104437 0.0 [{I|L}T]{M(Oxidation (M))|F}PAQ{I|L}TM;[PA]Q{I|L}T{M(Oxidation (M))|F}{I|L}TM;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{M(Oxidation (M))|F}V[YV]M;[PA]QDV{M(Oxidation (M))|F}{I|L}TM;[DP]AQV{M(Oxidation (M))|F}{I|L}TM;[QA]P{I|L}T{M(Oxidation (M))|F}{I|L}TM;[QA]PDV{M(Oxidation (M))|F}{I|L}TM;[PA]AGDV{M(Oxidation (M))|F}{I|L}TM;[{I|L}T]{M(Oxidation (M))|F}PA[AG]{I|L}TM;[PA]DQV{M(Oxidation (M))|F}{I|L}TM 4.1784;3.9569;3.8857;3.8856;3.8451;3.7243;3.6531;3.3458;3.2761;3.2007 -;-;-;-;-;-;-;-;-;- 801 1 1.995 54897.9 1.0 4999 3659 8658 DOHH2_400M_050219_2,8660 DOHH2_400M_050219_2,8660,FVDPAQITM False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8662 49.537 52.0 755130.0 25 0 92798.0 44051 YINNKAKII 9 56 538.8268691261638 1075.6391853191276 2 538.8273193240166 MULTI CID FTMS 0 0 0 8661 840515.4375 0.1548421859188494 24 -0.7743415832519531 1 Unmodified _YINNKAKII_ ENSG00000136011|ENST00000388887|STAB2 8.593279151180031 0.6146971463335029 2 V{I|L}Y{I|L}{I|L} 5 6 26.708 0.0 0.0 2.483 0.0 0.0 456.244920799025 0.0 456.244920799025 0.0 15.598943791441968 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.0 V{I|L}Y{I|L}{I|L} 2.483 - 39 1 1.995 37946.7 1.0 5000 3660 8661 DOHH2_400M_050219_2,8662 DOHH2_400M_050219_2,8662,YINNKAKII False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8663 49.547 599.0 203330.0 25 0 13915.0 + 38591 TTDLFGRDLSY 11 102 644.3142892519643 1286.6140255707285 2 644.3151122927666 MULTI CID FTMS 0 0 0 8661 157416.03125 0.1057969558917324 -6 0.0942764282226562 2 Unmodified _TTDLFGRDLSY_ ENSG00000169813|ENST00000682386|HNRNPF 83.27773906761396 0.0052189922445383 2 TTD{I|L}{M(Oxidation (M))|F}Y[KT]T 9 6 83.056 0.0 0.0 6.4554 0.0 0.0 0.0 213.0516756647094 213.0516756647094 41.67680179738202 0.0 0.0 0.0 0 0.7614393726401688 2.0 1.5356668758921828 0.3252574989159953 TTD{I|L}{M(Oxidation (M))|F}Y[KT]T 6.4554 - 816 + 1 1.995 95362.6 1.0 5001 3660 8661 DOHH2_400M_050219_2,8663 DOHH2_400M_050219_2,8663,TTDLFGRDLSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8664 49.561 800.0 95489.0 25 0 15068.0 + -1 DYSDEMEPDY 10 101 640.2178987168688 1278.4212445005376 2 640.2182494997978 MULTI CID FTMS 0 0 0 8661 96851.40625 0.8922849722543336 -1 0.0205001831054687 3 Oxidation (M) _DYSDEM(Oxidation (M))EPDY_ REV__nc|ENSG00000288674|P49810-3|PSEN2 7.289230182591677 0.6929195370588109 2 {M(Oxidation (M))|F}DD 3 -1 18.162 0.0 0.0 1.4206 0.0 0.0 766.2296073929189 132.0456942193969 898.2753016123157 0.0 0.0 0.0 0.0 0 0.5 0.0 0.5994850021680094 0.0 {M(Oxidation (M))|F}DD 1.4206 - 174 + 1 1.995 61128.7 0.4399999976158142 5002 3660 8661 DOHH2_400M_050219_2,8664 DOHH2_400M_050219_2,8664,DYSDEMEPDY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8666 49.569 223.0 185290.0 25 0 17244.0 + 354 AEASVDPSLSW 11 80 581.2745745214505 1160.534596109701 2 581.2750121951103 MULTI CID FTMS 0 0 0 8665 261794.140625 0.6167816801963709 7 -0.2507400512695312 1 Unmodified _AEASVDPSLSW_ ENSG00000132467|ENST00000254803|UTP3 38.17557092003332 0.2405003631267018 2 SW 2 9 17.959 0.0 0.0 1.5475 0.0 0.0 869.4121757133717 0.0 869.4121757133717 0.0 -1.1702385600738232 -1.1702385600738232 0.0 0 0.0 0.0 0.0 0.0 + SW 1.5475 + + 423 + 1 1.995 36047.6 1.0 5003 3661 8665 DOHH2_400M_050219_2,8666 DOHH2_400M_050219_2,8666,AEASVDPSLSW False True AEASVDPSLSW 49.56936 581.27501219511 5704217.0 8665.0 ENSG00000132467|ENST00000254803|UTP3 6.833554903666179 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8667 49.583 800.0 62647.0 25 0 3305.9 -1 0 74 881.905231547614 1761.795910162028 2 882.4057494997978 MULTI CID FTMS 0 0 0 8665 91314.1875 0.0360490915895495 -7 0.1237258911132812 2 2 Y{M(Oxidation (M))|F}ADQAGA[CS]C(Carbamidomethyl (C))V{I|L} 13 -1 72.002 0.0 0.0 4.0868 0.0 0.0 358.2210333083154 0.0 358.2210333083154 0.0 59.29870120485762 0.0 0.0 0 0.3054621874040891 0.0 0.0 1.274227503252014 Y{M(Oxidation (M))|F}ADQAGA[CS]C(Carbamidomethyl (C))V{I|L} 4.0868 - 1811 + 1 1.995 39205.8 0.3899999856948852 5004 3661 8665 DOHH2_400M_050219_2,8667 DOHH2_400M_050219_2,8667, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8668 49.597 800.0 118970.0 25 0 17280.0 + 43636 YALPHAIL 8 112 449.2634336141255 896.512314295051 2 449.2639648318291 MULTI CID FTMS 0 0 0 8665 90988.75 0.1762663064222566 -5 0.10345458984375 3 Unmodified _YALPHAIL_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224051789-224052101:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF 64.08090720244739 0.1161809961245979 2 YA{I|L}PHA{I|L}{I|L} 8 0 + 58.013 0.0 0.0 6.471 6.471 92.304 0.0 0.0 0.0 0.4453125937239832 8.332815690330122 0.4453125937239832 18.475862139862897 0 1.242992819099939 2.0 0.0 0.0 + + YA{I|L}PHA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]Y{I|L}{I|L};[HA]P{I|L}AY{I|L}{I|L};[{I|L}A]HPAY{I|L}{I|L};[HA]P{I|L}YA{I|L}{I|L};[{I|L}A]HPYA{I|L}{I|L};[HA]{I|L}PAY{I|L}{I|L};[HA]{I|L}PYA{I|L}{I|L};[{I|L}A]H{I|L}{M(Oxidation (M))|F}A{I|L}{I|L};[HA]{I|L}{I|L}{M(Oxidation (M))|F}A{I|L}{I|L} 6.471;4.4101;3.8404;3.7706;3.5046;3.4348;3.3082;2.9724;2.2732;1.8108 +;-;-;-;-;-;-;-;-;- + 244 + 1 1.995 77508.8 0.3899999856948852 5005 3661 8665 DOHH2_400M_050219_2,8668 DOHH2_400M_050219_2,8668,YALPHAIL True True YALPHAIL 49.597024 449.263964831829 5617645.5 8665.0 ENST00000436287.1_1_1:224051789-224052101:-|nuORF;;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;;ENSG00000075624|ENST00000646664|ACTB;;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;;ENSG00000169067|ENST00000423391|ACTBL2;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF 5.195423126220703 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8669 49.605 456.0 166410.0 25 0 17287.0 + 4816 DEVAIFYVIW 10 92 627.8226506130092 1253.6307482928182 2 628.3247558474541 MULTI CID FTMS 0 0 0 8665 115704.65625 1.0 0 0.0 4 Unmodified _DEVAIFYVIW_ REV__ENSG00000249242|ENST00000449862|TMEM150C;REV__nc|ENSG00000249242|B9EJG8-2|TMEM150C 14.838274106304384 0.5985701837916485 2 N{I|L}W 3 -1 27.703 0.0 0.0 2.2098 0.0 0.0 822.4131518265172 0.0 822.4131518265172 0.0 21.760912590556813 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 N{I|L}W 2.2098 - 145 1 1.995 60579.2 1.0 5006 3661 8665 DOHH2_400M_050219_2,8669 DOHH2_400M_050219_2,8669,DEVAIFYVIW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8671 49.617 519.0 138600.0 25 0 15168.0 + 17962 KRGDVIYIL 9 109 359.55364384236424 1075.6391021272927 3 359.5535461306572 MULTI CID FTMS 0 0 0 8670 109140.890625 0.072119970085721 26 -0.8716812133789062 1 Unmodified _KRGDVIYIL_ ENSG00000005020|ENST00000345317|SKAP2 8.155526934196011 0.6299788542272896 2 V{I|L}Y{I|L}{I|L} 5 4 19.38 0.0 0.0 1.8018 0.0 0.0 456.24400527168126 0.0 456.24400527168126 0.0 3.895840698002999 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.0 + V{I|L}Y{I|L}{I|L} 1.8018 + + 76 1 1.995 63029.9 1.0 5007 3662 8670 DOHH2_400M_050219_2,8671 DOHH2_400M_050219_2,8671,KRGDVIYIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8672 49.627 570.0 186490.0 25 0 23615.0 + 382 AEDKPYAELW 10 107 611.2925710016551 1220.57058907011 2 611.2930786013603 MULTI CID FTMS 0 0 0 8670 143341.40625 0.8942193534300413 -1 0.0438575744628906 2 Unmodified _AEDKPYAELW_ ENSG00000178802|ENST00000352410|MPI;ENST00000568840.1_1_15:75182430-75185220:+|nuORF;nc|ENSG00000178802|P34949-2|MPI 45.69961567697781 0.105390671673896 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEKDAE{I|L}W 10 5 + 73.497 0.0 0.0 6.0216 6.0216 84.655 0.0 0.0 0.0 14.259687322722812 55.32710378649152 14.259687322722812 7.257724967479859 0 0.8494850021680094 1.0 1.610924374808178 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEKDAE{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEKDEA{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AWWAE{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AT[VG]DAE{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATRDAE{I|L}{[DA]|[EG]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEKD{I|L}EAW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATRWE{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AE{I|L}[NS]E{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AWWEA{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AE{I|L}KDEAW 6.0216;5.4269;5.1358;4.8798;4.8798;4.8333;4.7836;4.6192;4.5412;4.4739 -;-;-;-;-;-;-;-;-;- 1599 1 1.995 81962.4 1.0 5008 3662 8670 DOHH2_400M_050219_2,8672 DOHH2_400M_050219_2,8672,AEDKPYAELW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8673 49.638 615.0 166170.0 25 0 44502.0 + 8483 ETDEKDFYLYY 11 95 743.3249146655426 1484.635276397885 2 743.8268920779228 MULTI CID FTMS 0 0 0 8670 142160.546875 0.292440164880097 -4 0.1204681396484375 3 Unmodified _ETDEKDFYLYY_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 67.83816525789305 0.0386695545555003 2 [Y{I|L}]{M(Oxidation (M))|F}DK{M(Oxidation (M))|F}P{[ET]|[MV]}YY 11 8 + 53.108 0.0 0.0 3.5772 3.5772 67.582 0.0 0.0 0.0 0.568109453757657 5.43955428426262 0.568109453757657 0.568109453757657 0 0.8182503180159344 2.0 0.0 0.4247425010840047 [Y{I|L}]{M(Oxidation (M))|F}DK{M(Oxidation (M))|F}P{[ET]|[MV]}YY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[ET]|[MV]}KD{M(Oxidation (M))|F}Y{I|L}YY;{[{M(Oxidation (M))|F}D]|MM}Y{I|L}YYY{I|L}YY;{[ET]|[MV]}N{[HG]|PP}YYY{I|L}YY;{[{M(Oxidation (M))|F}D]|MM}Y{I|L}K{M(Oxidation (M))|F}P{[ET]|[MV]}YY;{[ET]|[MV]}WWD{M(Oxidation (M))|F}Y{I|L}YY;[PS]N{[DS]|[MA]|[CV]|TT}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}Y{I|L}YY;{[{M(Oxidation (M))|F}D]|MM}YK{I|L}{M(Oxidation (M))|F}P{[ET]|[MV]}YY;[Y{I|L}]{M(Oxidation (M))|F}DWW{[ET]|[MV]}YY;[DP]DEK[QT]P{[ET]|[MV]}YY 3.5772;3.5389;2.8891;2.6169;2.5514;2.4776;2.3136;2.2301;2.1093;2.0104 -;-;-;-;-;-;-;-;-;- 1093 1 1.995 80731.6 1.0 5009 3662 8670 DOHH2_400M_050219_2,8673 DOHH2_400M_050219_2,8673,ETDEKDFYLYY True True ETDEKDFYLYY 49.637561 743.3259 7649699.0 8670.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 7.486833413441976 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8674 49.651 800.0 82486.0 25 0 20904.0 9269 FHRNRRVTRR 10 67 699.4090031897522 1396.8034534463045 2 699.4093505740166 MULTI CID FTMS 0 0 0 8670 83050.3984375 0.2413276032831511 -10 0.1956443786621093 4 Unmodified _FHRNRRVTRR_ ENSG00000162490|ENST00000294485|DRAXIN 0.4583401331227399 0.7245164002484112 2 Y 1 10 10.969 0.0 0.0 0.7853 0.0 0.0 1215.7291716853651 0.0 1215.7291716853651 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.7853 - 4 + 1 1.995 60658.6 0.4000000059604645 5010 3662 8670 DOHH2_400M_050219_2,8674 DOHH2_400M_050219_2,8674,FHRNRRVTRR False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8675 49.661 542.0 214140.0 25 0 34956.0 + 25931 NLLSRTVTL 9 108 508.8089380619439 1015.6033231906878 2 508.8087036013603 MULTI CID FTMS 0 0 0 8670 144078.046875 0.412585331516364 -3 0.0938072204589843 5 Unmodified _NLLSRTVTL_ ENST00000393085.3_1_7:135613116-135613200:-|nuORF 61.60191391372663 0.0251951588191061 2 N{I|L}{I|L}S 4 5 62.652 0.0 0.0 6.1689 0.0 0.0 0.0 585.3372286432249 585.3372286432249 33.002829796780034 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.7742275032520141 0.0 + N{I|L}{I|L}S 6.1689 + + 333 + 1 1.995 90954.3 1.0 5011 3662 8670 DOHH2_400M_050219_2,8675 DOHH2_400M_050219_2,8675,NLLSRTVTL True True NLLSRTVTL 49.660922 508.80870360136 1945808.0 8670.0 ENST00000393085.3_1_7:135613116-135613200:-|nuORF 1.4083240901430447 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8677 49.679 800.0 92556.0 25 0 16357.0 + 30198 QVVKIKKSY 9 89 546.8408156109135 1091.667078288627 2 546.8409911990166 MULTI CID FTMS 0 0 0 8676 75785.609375 0.2624978879606559 18 -0.4782180786132812 1 Unmodified _QVVKIKKSY_ REV__ENST00000460138.5_1_6:7881773-7881830:-|nuORF 4.75600775471527 0.7486543447549536 2 SW 2 -1 14.949 0.0 0.0 1.3693 0.0 0.0 800.5450530687975 0.0 800.5450530687975 0.0 2.730012720637376 0.0 0.0 0 0.0 0.0 0.0 0.0 SW 1.3693 - 37 + 1 1.995 61798.1 0.5 5012 3663 8676 DOHH2_400M_050219_2,8677 DOHH2_400M_050219_2,8677,QVVKIKKSY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8678 49.687 476.0 239800.0 25 0 31046.0 + 6914 EEFGRFASF 9 120 545.2536270266303 1088.4927011200605 2 545.2535888552666 MULTI CID FTMS 0 0 0 8676 167797.5625 0.2288959989850947 -6 0.1803398132324218 2 Unmodified _EEFGRFASF_ ENSG00000204287|ENST00000395388|HLA-DRA 72.96794272382148 0.0199516581995792 2 EE{M(Oxidation (M))|F}G 4 5 51.732 0.0 0.0 4.7526 0.0 0.0 0.0 623.2965181940061 623.2965181940061 18.044701178513115 0.0 0.0 0.0 0 0.5189301784845295 1.6989700043360187 0.0 0.0 + EE{M(Oxidation (M))|F}G 4.7526 + + 1814 + 1 1.995 90115.4 1.0 5013 3663 8676 DOHH2_400M_050219_2,8678 DOHH2_400M_050219_2,8678,EEFGRFASF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8679 49.701 800.0 94973.0 25 0 9994.4 + 43467 WVDPYEVSY 9 93 579.2609742085697 1156.5073954839393 2 579.2609741091728 MULTI CID FTMS 0 0 0 8676 100973.59375 0.8700585699586365 -3 0.1291122436523437 3 Unmodified _WVDPYEVSY_ ENSG00000133639|ENST00000256015|BTG1;ENSG00000159388|ENST00000290551|BTG2 28.486842064014134 0.1687311288560894 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EDVAD 7 6 33.945 0.0 0.0 2.9351 0.0 0.0 0.0 364.1506577357935 364.1506577357935 6.395388402139446 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EDVAD 2.9351 - 772 1 1.995 63697.8 0.4399999976158142 5014 3663 8676 DOHH2_400M_050219_2,8679 DOHH2_400M_050219_2,8679,WVDPYEVSY False True WVDPYEVSY 49.700899 579.260974109173 854397.0625 8676.0 ENSG00000159388|ENST00000290551|BTG2;;ENSG00000133639|ENST00000256015|BTG1 2.3083647092183432 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8680 49.715 800.0 57106.0 25 0 12340.0 32998 SENLKRLIKH 10 64 619.3716557913624 1236.7287586495247 2 619.3717529177666 MULTI CID FTMS 0 0 0 8676 84921.1796875 1.0 0 0.0 4 Unmodified _SENLKRLIKH_ ENSG00000008513|ENST00000522652|ST3GAL1;ENST00000522204.1_1_8:134478135-134488174:-|nuORF 1.6526216038709556 0.7189921496796233 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.995 39842.8 0.4099999964237213 5015 3663 8676 DOHH2_400M_050219_2,8680 DOHH2_400M_050219_2,8680,SENLKRLIKH False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8682 49.721 184.0 253870.0 25 0 26845.0 + 548 AEIEIVKDL 9 74 515.2944737480676 1028.5743945629351 2 515.2949706912041 MULTI CID FTMS 0 0 0 8681 254114.578125 0.2925313489406815 3 -0.0597343444824218 1 Unmodified _AEIEIVKDL_ ENSG00000122884|ENST00000394890|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1;nc|ENSG00000122884|P13674-3|P4HA1 36.506200033944 0.094635877243972 2 {[QN]|[E{I|L}]|[KN]}AE{I|L}VKD{I|L} 9 2 {[QN]|[E{I|L}]|[KN]}A + + 40.354 20.959 6.6927 3.9233 3.9233 51.425 0.0 0.0 0.0 0.0 27.957895581713643 0.0 0.0 0 0.805462187404089 0.0 0.805462187404089 0.0 {[QN]|[E{I|L}]|[KN]}AE{I|L}VKD{I|L} 3.9233 - 231 + 1 1.995 42270.3 1.0 5016 3664 8681 DOHH2_400M_050219_2,8682 DOHH2_400M_050219_2,8682,AEIEIVKDL True True AEIEIVKDL 49.720848 515.294970691204 8866616.0 8681.0 nc|ENSG00000122884|P13674-3|P4HA1;;nc|ENSG00000122884|P13674-2|P4HA1;;ENSG00000122884|ENST00000394890|P4HA1 5.990804513295491 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8683 49.731 599.0 123200.0 25 0 15047.0 + 33004 SENNIQTIF 9 111 533.2647969142416 1064.5150408952832 2 533.2650024294853 MULTI CID FTMS 0 0 0 8681 127853.125 0.5191651608998956 -4 0.1829261779785156 2 Unmodified _SENNIQTIF_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 92.4914307365334 0.0139747738690111 2 {[ES]|[DT]|[{I|L}C]}NN{I|L}QT{I|L}{M(Oxidation (M))|F} 9 0 + 55.208 0.0 0.0 5.1862 5.1862 84.269 0.0 0.0 0.0 13.47677438916211 37.2442814851831 13.47677438916211 9.208187539523747 0 0.8935078169319297 0.0 1.208170666312956 1.610924374808178 + + {[ES]|[DT]|[{I|L}C]}NN{I|L}QT{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGN{I|L}QT{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NN{I|L}[AG]T{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NGG{I|L}QT{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGN{I|L}[AG]T{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NGG{I|L}[AG]T{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGGG{I|L}QT{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[ES]|[DT]|[{I|L}C]}QT{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[ES]|[DT]|[{I|L}C]}[AG]T{I|L}{M(Oxidation (M))|F};[{I|L}T][WE]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F} 5.1862;4.3212;4.3212;4.3212;3.4603;3.4603;2.745;2.6935;1.8285;1.7196 +;-;-;-;-;-;-;-;-;- + 352 1 1.995 59912.8 1.0 5017 3664 8681 DOHH2_400M_050219_2,8683 DOHH2_400M_050219_2,8683,SENNIQTIF True True SENNIQTIF 49.731326 533.265002429485 3120436.0 8681.0 nc|ENSG00000150093|P05556-2|ITGB1;;nc|ENSG00000150093|P05556-4|ITGB1;;nc|ENSG00000150093|P05556-5|ITGB1;;ENSG00000150093|ENST00000302278|ITGB1;;nc|ENSG00000150093|P05556-3|ITGB1 6.391425609588623 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8684 49.745 800.0 133230.0 25 0 9440.1 + 7096 EEMDLFTKY 9 124 588.2683547970131 1174.522156660826 2 588.2684814333916 MULTI CID FTMS 0 0 0 8681 91615.046875 0.5039413370558911 -3 0.1534767150878906 3 Unmodified _EEMDLFTKY_ ENSG00000092020|ENST00000261475|PPP2R3C;ENST00000556254.1_1_14:35579616-35591165:-|nuORF;ENST00000557773.5_1_14:35568434-35591165:-|nuORF 49.55428908609986 0.0413471690215031 2 EEMD{I|L}{M(Oxidation (M))|F}TKY 9 0 + 76.027 0.0 0.0 6.473 6.473 93.928 0.0 0.0 0.0 60.84991425165589 13.46787486224656 13.46787486224656 37.03402196076127 0 0.6139829889124311 1.5228787452803376 0.0 0.3054621874040891 + + EEMD{I|L}{M(Oxidation (M))|F}TKY;[MD]{I|L}VV{I|L}DM[HC];EEMVV{[YD]|[{M(Oxidation (M))|F}M]}KY;[DP]VV{M(Oxidation (M))|F}{I|L}DM[HC];{NN|[MP]|[D{I|L}]|[EV]}MVV{I|L}DM[HC];[DP]{M(Oxidation (M))|F}VV{I|L}DM[HC];EEM[TP][NP]K{[ET]|[MV]};[KT]{M(Oxidation (M))|F}[NP][TP]M[HC];EEM[TP][EP]{I|L}{[ET]|[MV]};[MD]{I|L}{NN|[MP]|[D{I|L}]|[EV]}VVM[HC] 6.473;3.3199;3.0343;2.8129;2.6423;2.4066;1.901;1.6687;1.434;1.2213 +;-;-;-;-;-;-;-;-;- + 365 + 1 1.995 83200.1 0.4099999964237213 5018 3664 8681 DOHH2_400M_050219_2,8684 DOHH2_400M_050219_2,8684,EEMDLFTKY True True EEMDLFTKY 49.745159 588.268481433392 1100914.875 8681.0 ENST00000556254.1_1_14:35579616-35591165:-|nuORF;;ENSG00000092020|ENST00000261475|PPP2R3C;;ENST00000557773.5_1_14:35568434-35591165:-|nuORF 8.32998514175415 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8687 49.766 800.0 95995.0 25 0 8835.9 + 19329 LEMKQLML 8 130 503.2754014912256 1004.5362500492512 2 503.2752868533134 MULTI CID FTMS 0 0 0 8686 107646.8203125 0.6940576309707785 -3 0.0882987976074218 1 Unmodified _LEMKQLML_ REV__ENSG00000150477|ENST00000280020|KIAA1328;REV__ENST00000590617.5_1_18:34415331-34802187:+|nuORF;REV__ENST00000592611.5_1_18:34415331-34809581:+|nuORF;REV__ENST00000599493.1_1_18:34647308-34664196:+|nuORF;REV__nc|ENSG00000150477|Q86T90-2|KIAA1328;REV__nc|ENSG00000150477|Q86T90-3|KIAA1328;REV__nc|ENSG00000150477|Q86T90-4|KIAA1328 52.268347100219714 0.1285778651304833 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[SG]Q{I|L}M{I|L} 9 -1 + 47.647 0.0 0.0 4.7431 4.7431 73.541 0.0 0.0 0.0 8.30748165474624 16.478174818886373 8.30748165474624 1.989700043360188 0 0.7302046884880937 1.6989700043360187 0.3494850021680094 0.5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[SG]Q{I|L}M{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[SG]{I|L}QM{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[SG]QP{M(Oxidation (M))|F}{I|L};[KP]E{M(Oxidation (M))|F}Q{I|L}M{I|L};[KP]E{M(Oxidation (M))|F}{I|L}QM{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[SG]{I|L}[AG]M{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[SG]{I|L}MQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[SG][AG]{I|L}M{I|L};[{I|L}T]{[WT]|[RM]}Q{I|L}M{I|L};[KP]E{M(Oxidation (M))|F}QP{M(Oxidation (M))|F}{I|L} 4.7431;4.5451;4.0206;3.9161;3.7181;3.6284;3.3476;3.3287;3.2482;3.1936 -;-;-;-;-;-;-;-;-;- 424 1 1.995 62756.7 0.4300000071525574 5019 3666 8686 DOHH2_400M_050219_2,8687 DOHH2_400M_050219_2,8687,LEMKQLML False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8688 49.774 504.0 160930.0 25 0 16176.0 + 23399 LTDYDIRFY 9 87 603.2954903856603 1204.5764278381205 2 603.2951537966728 MULTI CID FTMS 0 0 0 8686 110570.8671875 0.3290367819104096 -5 0.1879615783691406 2 Unmodified _LTDYDIRFY_ CSNK2A1|p.K229Rfs*15|1|0.27|ENSG00000101266|chr20:489819-489819|C/-|frameshift_variant;ENSG00000101266|ENST00000217244|CSNK2A1;ENSG00000254598|ENST00000528848|CSNK2A3 60.07390631473393 0.0260411565414776 2 {I|L}TDYD{I|L}R{M(Oxidation (M))|F}Y 9 0 + 93.454 0.0 0.0 7.7582 7.7582 97.029 0.0 0.0 0.0 68.6721376912844 9.87765543582988 9.87765543582988 37.99085977895906 0 0.8494850021680094 2.0 0.3807196863200844 0.3807196863200844 + + {I|L}TDYD{I|L}R{M(Oxidation (M))|F}Y;{I|L}TD{[NV]|[RG]}[W{M(Oxidation (M))|F}]D[VP];{I|L}TD{[NV]|[RG]}D[W{M(Oxidation (M))|F}][VP];[VP][C(Carbamidomethyl (C))K]{I|L}DYD[VP];{[YD]|[{M(Oxidation (M))|F}M]}D[R{I|L}]{[NV]|[RG]}D[VP];{[YD]|[{M(Oxidation (M))|F}M]}[R{I|L}]D{[NV]|[RG]}D[VP];[VP]D[HV]D{[NV]|[RG]}D[VP];{[ES]|[DT]|[{I|L}C]}{I|L}{[QS]|[NT]}[PA]YD[VP];{[ES]|[DT]|[{I|L}C]}{I|L}[W{M(Oxidation (M))|F}]{[NV]|[RG]}D[VP] 7.7582;4.6043;4.3957;4.0218;2.7719;2.6257;2.5489;1.7283;1.4323 +;-;-;-;-;-;-;-;- + 198 + 1 1.995 63767.5 1.0 5020 3666 8686 DOHH2_400M_050219_2,8688 DOHH2_400M_050219_2,8688,LTDYDIRFY True True LTDYDIRFY 49.774486 603.295153796673 2044641.5 8686.0 ENSG00000101266|ENST00000217244|CSNK2A1;;CSNK2A1|p.K229Rfs*15|1|0.27|ENSG00000101266|chr20:489819-489819|C/-|frameshift_variant;;ENSG00000254598|ENST00000528848|CSNK2A3 6.657205899556478 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8690 49.784 409.0 100400.0 25 0 7082.5 + 10520 FVDPAQITM 9 76 511.25435411491566 1020.4941552966312 2 511.2545349001884 MULTI CID FTMS 0 0 0 8689 103269.984375 0.5985900172912667 5 -0.1501998901367187 1 Unmodified _FVDPAQITM_ ENSG00000167325|ENST00000300738|RRM1 20.453626601364224 0.2830276176381075 2 [PA]QDV{M(Oxidation (M))|F}{I|L}TM 9 6 [PA]QDV{M(Oxidation (M))|F}{I|L} + + 20.174 22.092 2.8676 1.9769 1.9769 47.464 0.0 0.0 0.0 0.0 -7.560574668912221 -7.560574668912221 0.0 0 0.0 0.0 0.2215141619232908 0.0 [PA]QDV{M(Oxidation (M))|F}{I|L}TM 1.9769 - 144 + 1 1.995 37997.7 1.0 5021 3667 8689 DOHH2_400M_050219_2,8690 DOHH2_400M_050219_2,8690,FVDPAQITM False True FVDPAQITM 49.784346 511.254534900188 2814556.25 8689.0 ENSG00000167325|ENST00000300738|RRM1 6.918170928955078 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8691 49.798 800.0 105280.0 25 0 10557.0 + 16699 KESEVFYEL 9 102 572.2820428159287 1142.5495326986572 2 572.2825805544853 MULTI CID FTMS 0 0 0 8689 87940.21875 0.237585185881865 -5 0.1693534851074218 2 Unmodified _KESEVFYEL_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 57.72198328787511 0.0273433238377839 2 {[TV]|[{I|L}S]}G{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}YE{I|L} 10 3 + 51.193 0.0 0.0 4.4806 4.4806 73.497 0.0 0.0 0.0 5.39269161468507 16.532125137753432 5.39269161468507 2.887254899964354 0 0.2396518287104437 0.8860566476931632 1.6571406706489746 0.0 {[TV]|[{I|L}S]}G{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}YE{I|L};{[TV]|[{I|L}S]}D{[SA]|[TG]}V{M(Oxidation (M))|F}YE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}YE{I|L};[YE]KE{[VA]|[{I|L}G]}YE{I|L};{[TV]|[{I|L}S]}WW{M(Oxidation (M))|F}YE{I|L};{[ES]|[DT]|[{I|L}C]}V{[SA]|[TG]}V{M(Oxidation (M))|F}YE{I|L};{[TV]|[{I|L}S]}GYE{[VA]|[{I|L}G]}YE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y[W{I|L}]YE{I|L};{[TV]|[{I|L}S]}G{[ES]|[DT]|[{I|L}C]}VEY{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE{[VA]|[{I|L}G]}YE{I|L} 4.4806;4.2279;4.0086;3.9585;3.8904;3.2084;3.0869;2.9924;2.6872;2.6149 -;-;+;-;-;-;-;-;-;- + 570 1 1.995 67259.3 0.4199999868869781 5022 3667 8689 DOHH2_400M_050219_2,8691 DOHH2_400M_050219_2,8691,KESEVFYEL True True KESEVFYEL 49.798177 572.282580554485 3775104.75 8689.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 4.884406089782715 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8692 49.812 800.0 53912.0 25 0 12555.0 4802 DEPKLDRIVRL 11 84 677.3959595610053 1352.7773661888104 2 677.3948852419853 MULTI CID FTMS 0 0 0 8689 102447.9375 0.2068873859072043 34 -1.181365966796875 3 Unmodified _DEPKLDRIVRL_ ENSG00000176428|ENST00000324941|VPS37D 1.3295316138638542 0.8688751186870782 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 1.995 42303.4 0.449999988079071 5023 3667 8689 DOHH2_400M_050219_2,8692 DOHH2_400M_050219_2,8692,DEPKLDRIVRL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8694 49.817 59.0 910240.0 25 0 80579.0 + 38592 TTDLFGRDLSY 11 56 644.3142892519643 1286.6140255707285 2 644.3145019412041 MULTI CID FTMS 0 0 0 8693 865320.8125 0.5815691521714731 2 -0.0756263732910156 1 Unmodified _TTDLFGRDLSY_ ENSG00000169813|ENST00000682386|HNRNPF 62.86856922530385 0.057503257068159 2 {[DS]|[MA]|[CV]|TT}D{I|L}{M(Oxidation (M))|F}[DV]N{I|L}SY 11 3 {[DS]|[MA]|[CV]|TT} + + 52.374 7.5308 3.7264 4.0707 4.0707 51.868 0.0 0.0 0.0 0.0 35.13850249415157 0.0 0.0 0 2.473197507588033 0.0 0.6549471895720985 0.0 {[DS]|[MA]|[CV]|TT}D{I|L}{M(Oxidation (M))|F}[DV]N{I|L}SY 4.0707 - 133 + 1 1.995 47494.0 1.0 5024 3668 8693 DOHH2_400M_050219_2,8694 DOHH2_400M_050219_2,8694,TTDLFGRDLSY True True TTDLFGRDLSY 49.817366 644.314501941204 30099738.0 8693.0 ENSG00000169813|ENST00000682386|HNRNPF 8.276372909545898 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8695 49.823 295.0 180910.0 25 0 20347.0 + 22874 LSARQLIYL 9 76 538.8268691261638 1075.6391853191276 2 538.8272582888603 MULTI CID FTMS 0 0 0 8693 187838.65625 0.0346041807635559 32 -1.1228523254394531 2 Unmodified _LSARQLIYL_ REV__ENST00000500268.6_1_4:10455867-10456122:-|nuORF 13.042465956692816 0.4836390050082244 2 {I|L}Y{I|L}{I|L} 4 -1 22.123 0.0 0.0 2.0567 0.0 0.0 555.3128529279312 0.0 555.3128529279312 0.0 8.143265708843046 0.0 0.0 0 0.5924778212679485 0.0 0.0 0.0 {I|L}Y{I|L}{I|L} 2.0567 - 30 1 1.995 48492.9 1.0 5025 3668 8693 DOHH2_400M_050219_2,8695 DOHH2_400M_050219_2,8695,LSARQLIYL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8696 49.835 690.0 98959.0 25 0 10441.0 + 42397 VTDTGALYLY 10 101 558.2853251346156 1114.5560973360311 2 558.2859985232353 MULTI CID FTMS 0 0 0 8693 111969.1875 0.6157887057265032 -4 0.0972633361816406 3 Unmodified _VTDTGALYLY_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 54.773552608820026 0.052133998764723 2 [QT]DTV{I|L}Y{I|L}Y 9 3 + 58.75 0.0 0.0 5.2711 5.2711 74.991 0.0 0.0 0.0 3.5931806021543693 25.89645275486931 3.5931806021543693 1.5186375580366729 0 1.1989700043360187 0.0 2.2638793319624577 0.2059771852360797 [QT]DTV{I|L}Y{I|L}Y;[QT]DT{I|L}VY{I|L}Y;[QT]{I|L}DTYV{I|L}Y;[QT]DT{I|L}YV{I|L}Y;[QT]D{I|L}TYV{I|L}Y;[QT]{I|L}DYTV{I|L}Y;{[TV]|[{I|L}S]}AADTYV{I|L}Y;{[ES]|[DT]|[{I|L}C]}QTV{I|L}Y{I|L}Y;[QT]{I|L}DS{I|L}Y{I|L}Y;{[ES]|[DT]|[{I|L}C]}QT{I|L}VY{I|L}Y 5.2711;5.1349;5.0176;4.9283;4.8138;4.704;4.6888;4.6533;4.6377;4.517 -;-;-;-;-;-;-;-;-;- 1021 1 1.995 58263.7 1.0 5026 3668 8693 DOHH2_400M_050219_2,8696 DOHH2_400M_050219_2,8696,VTDTGALYLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8697 49.849 800.0 55007.0 25 0 14843.0 + -1 LLHLVTRFLMR 11 65 707.9222422653296 1413.829931597459 2 707.9223510622978 MULTI CID FTMS 0 0 0 8693 84362.078125 0.7087200688088824 -2 0.0627784729003906 4 Oxidation (M) _LLHLVTRFLM(Oxidation (M))R_ REV__ENSG00000143669|ENST00000389793|LYST;REV__ENST00000465349.5_1_1:235954948-235996891:-|nuORF;REV__ENST00000489585.5_1_1:235926109-235996891:-|nuORF;REV__nc|ENSG00000143669|Q99698-2|LYST;REV__nc|ENSG00000143669|Q99698-3|LYST 1.4819007175156935 0.86815623132643 2 Y 1 -1 10.969 0.0 0.0 0.77584 0.0 0.0 1232.7560465650356 0.0 1232.7560465650356 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.77584 - 2 + 1 1.995 44928.4 0.4000000059604645 5027 3668 8693 DOHH2_400M_050219_2,8697 DOHH2_400M_050219_2,8697,LLHLVTRFLMR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8699 49.853 26.0 1900300.0 25 0 94331.0 -1 0 73 881.905231547614 1761.795910162028 2 881.9054443240166 MULTI CID FTMS 0 0 0 8698 2414278.25 0.8861195136153602 1 -0.0390129089355468 1 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YE 13 -1 80.553 0.0 0.0 4.5722 0.0 0.0 0.0 226.1413440822029 226.1413440822029 50.1201227351842 0.0 0.0 0.0 0 0.3807196863200844 1.2218487496163564 0.0 1.2302046884880935 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YE 4.5722 - 2180 1 1.995 40963.0 1.0 5028 3669 8698 DOHH2_400M_050219_2,8699 DOHH2_400M_050219_2,8699, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8700 49.86 364.0 177950.0 25 0 30831.0 + 43637 YALPHAIL 8 89 449.2634336141255 896.512314295051 2 449.2633544802666 MULTI CID FTMS 0 0 0 8698 234985.859375 0.4552220960667231 3 -0.0760574340820312 2 Unmodified _YALPHAIL_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000436287.1_1_1:224051789-224052101:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF 41.81723621529253 0.2038889569391319 2 [HA]P{I|L}AY{I|L}{I|L} 8 4 + 43.096 0.0 0.0 4.8071 4.8071 72.82 0.0 0.0 0.0 1.275910229652979 1.275910229652979 1.275910229652979 1.275910229652979 0 0.5172203223519531 0.8538719643217619 0.0 0.0 [HA]P{I|L}AY{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P[HA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]Y{I|L}{I|L};[HA]P{I|L}A{I|L}Y{I|L};[HA]{I|L}PAY{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]{I|L}Y{I|L};[HA]P{I|L}{I|L}AY{I|L};[{I|L}A]HPAY{I|L}{I|L};[HA]{I|L}PA{I|L}Y{I|L};[{I|L}A]HPA{I|L}Y{I|L} 4.8071;4.6648;4.4244;4.1655;3.9391;3.7827;3.6333;3.485;3.2975;2.8433 -;+;-;-;-;-;-;-;-;- + 180 1 1.995 54337.5 1.0 5029 3669 8698 DOHH2_400M_050219_2,8700 DOHH2_400M_050219_2,8700,YALPHAIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8701 49.874 800.0 97370.0 25 0 8549.1 + + 11453 GEIDGNKVTLDW 12 107 673.8329259619879 1345.6512989907758 2 673.8331176638603 MULTI CID FTMS 0 0 0 8698 90898.2578125 0.5259821691014092 -2 0.0741424560546875 3 Unmodified _GIELQEFPIDW_ ENST00000461347.5_1_2:232319904-232323320:-|nuORF;ENSG00000115053|ENST00000322723|NCL 33.4449034751529 0.3133739643825231 2 {NN|[MP]|[D{I|L}]|[EV]}WVT{I|L}DA{I|L}DW 11 -1 + 98.035 0.0 0.0 7.2853 7.2853 80.047 0.0 0.0 0.0 2.971514781187068 5.9373996621854985 2.971514781187068 0.4406804435027709 0 1.424742501084005 1.0457574905606752 1.916386562212268 1.1549471895720984 {NN|[MP]|[D{I|L}]|[EV]}WVT{I|L}DA{I|L}DW;{NN|[MP]|[D{I|L}]|[EV]}ADVT{I|L}W{I|L}DW;{NN|[MP]|[D{I|L}]|[EV]}ADV{I|L}WT{I|L}DW;{[DA]|[EG]}{I|L}DVT{I|L}W{I|L}DW;{NN|[MP]|[D{I|L}]|[EV]}ADVT{I|L}{I|L}WDW;{NN|[MP]|[D{I|L}]|[EV]}WVT{I|L}W{I|L}DW;{NN|[MP]|[D{I|L}]|[EV]}WV{I|L}TDA{I|L}DW;{NN|[MP]|[D{I|L}]|[EV]}WVT{I|L}GE{I|L}DW;{NN|[MP]|[D{I|L}]|[EV]}WVT{I|L}D{I|L}ADW;{NN|[MP]|[D{I|L}]|[EV]}WVT{I|L}{I|L}DADW 7.2853;7.2526;7.1839;7.0645;7.0586;7.0204;6.9896;6.9896;6.9697;6.9605 -;-;-;-;-;-;-;-;-;- 9859 1 1.995 63965.3 0.4099999964237213 5030 3669 8698 DOHH2_400M_050219_2,8701 DOHH2_400M_050219_2,8701,GIELQEFPIDW False False GEIDGNKVTLDW 49.873808 673.83311766386 939292.25 8698.0 ENST00000461347.5_1_2:232319904-232323320:-|nuORF;;ENSG00000115053|ENST00000322723|NCL 6.071964422861735 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8702 49.888 800.0 138910.0 25 0 16994.0 -1 0 94 670.672945169691 2008.997006109273 3 671.0070068240166 MULTI CID FTMS 0 0 0 8698 83852.265625 0.1386101556264015 -10 0.3373031616210937 4 2 AN[YE]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}H{I|L}Q{[CP]|[EA]} 13 -1 43.373 0.0 0.0 2.1589 0.0 0.0 503.2982960431656 0.0 503.2982960431656 0.0 2.214047612776504 0.0 0.0 0 0.7614393726401688 0.0 0.3252574989159953 0.0 AN[YE]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}H{I|L}Q{[CP]|[EA]} 2.1589 - 667 1 1.995 91248.4 0.9900000095367432 5031 3669 8698 DOHH2_400M_050219_2,8702 DOHH2_400M_050219_2,8702, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8704 49.898 369.0 218580.0 25 0 60771.0 + 8484 ETDEKDFYLYY 11 84 743.3249146655426 1484.635276397885 2 743.3245117068291 MULTI CID FTMS 0 0 0 8703 197205.328125 0.3536064994507547 4 -0.0600433349609375 1 Unmodified _ETDEKDFYLYY_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 53.40400417844725 0.0987786977674846 2 [DP]S[R{M(Oxidation (M))|F}]D{M(Oxidation (M))|F}Y{I|L}YY 11 5 + 59.522 0.0 0.0 4.0092 4.0092 77.484 0.0 0.0 0.0 11.31238041787948 10.550088832413522 10.550088832413522 8.010299956639813 0 0.8182503180159344 1.2218487496163564 2.337180496500464 0.0 [DP]S[R{M(Oxidation (M))|F}]D{M(Oxidation (M))|F}Y{I|L}YY;[DP]S[R{M(Oxidation (M))|F}]DY{M(Oxidation (M))|F}{I|L}YY;[DP]S[R{M(Oxidation (M))|F}]D{M(Oxidation (M))|F}{I|L}YYY;{[ET]|[MV]}WWD{M(Oxidation (M))|F}Y{I|L}YY;[PS]D[R{M(Oxidation (M))|F}]D{M(Oxidation (M))|F}Y{I|L}YY;{[ET]|[MV]}WWDY{M(Oxidation (M))|F}{I|L}YY;{[ET]|[MV]}WWD{M(Oxidation (M))|F}{I|L}YYY;[PS]D[R{M(Oxidation (M))|F}]DY{M(Oxidation (M))|F}{I|L}YY;[PS]D[R{M(Oxidation (M))|F}]D{M(Oxidation (M))|F}{I|L}YYY;[DP]S[R{M(Oxidation (M))|F}]DY[{I|L}T]WW 4.0092;3.4697;3.3176;3.2472;3.0368;2.7077;2.5556;2.4973;2.3452;0.96475 -;-;-;-;-;-;-;-;-;- 242 1 1.995 65380.4 1.0 5032 3670 8703 DOHH2_400M_050219_2,8704 DOHH2_400M_050219_2,8704,ETDEKDFYLYY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8705 49.902 222.0 151430.0 25 0 46131.0 35168 SRSIFRKFLLM 11 54 699.4090031897522 1396.8034534463045 2 699.4086181521416 MULTI CID FTMS 0 0 0 8703 271217.03125 0.7881016509558393 -2 0.0756263732910156 2 Unmodified _SRSIFRKFLLM_ ENSG00000153976|ENST00000284110|HS3ST3A1 1.1933415558491238 0.8695176722560516 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 38798.0 1.0 5033 3670 8703 DOHH2_400M_050219_2,8705 DOHH2_400M_050219_2,8705,SRSIFRKFLLM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8707 49.917 704.0 120570.0 25 0 7076.5 43410 WRCWTWPWREW 11 107 846.3872057933796 1690.7598586535591 2 846.3860351443291 MULTI CID FTMS 0 0 0 8706 150965.8125 0.9806731962245276 1 -0.0222015380859375 1 Unmodified _WRCWTWPWREW_ ENST00000374279.3_1_9:114659094-114659565:+|nuORF 1.3295316138638542 0.8688751186870782 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQW{M(Oxidation (M))|F}YQV{I|L} 13 10 + 121.23 0.0 0.0 7.1699 7.1699 86.475 0.0 0.0 0.0 5.937040524562249 9.943508928956462 5.937040524562249 5.937040524562249 0 1.3667053245199623 1.3010299956639813 2.166386562212267 3.293157681736544 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQW{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QQW{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]QW{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQ{[DA]|[EG]}{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]Q[AG]W{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQ{[DA]|[EG]}{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQW{M(Oxidation (M))|F}Y[AG]V{I|L};[KT]EY{M(Oxidation (M))|F}WQQ[CS]C(Carbamidomethyl (C))V{I|L};[YQ]V[CS]QQW{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ]V[CS]Q[AG]W{M(Oxidation (M))|F}YQV{I|L} 7.1699;6.8188;6.6333;6.6333;6.6333;6.6333;6.6333;6.4096;6.2822;6.2822 -;-;-;-;-;-;-;-;-;- 9314 1 1.995 62192.6 1.0 5034 3671 8706 DOHH2_400M_050219_2,8707 DOHH2_400M_050219_2,8707,WRCWTWPWREW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8708 49.925 414.0 149810.0 25 0 16473.0 + 29088 QEMPWNVRM 9 83 595.7757279444456 1189.5369029556912 2 595.7766601443291 MULTI CID FTMS 0 0 0 8706 92446.75 0.3471552953781214 -6 0.157318115234375 2 Unmodified _QEMPWNVRM_ chr3:112128228-112130445|42|16.38|0.48|5.1|-|ENST00000495418|GCSAM,GCSAM;chr3:112130519-112133092|43|17.12|0.46|5.23|-|ENST00000484193|GCSAM,GCSAM;ENSG00000174500|ENST00000308910|GCSAM;nc|ENSG00000174500|Q8N6F7-2|GCSAM;nc|ENSG00000174500|Q8N6F7-3|GCSAM 82.5293158979368 0.0169039238599547 2 QEMPWNVRM 9 0 + 79.836 0.0 0.0 6.7115 6.7115 86.996 0.0 0.0 0.0 12.21848749616356 7.474250108400469 7.474250108400469 7.474250108400469 0 1.3979400086720375 1.3979400086720375 0.0 0.805462187404089 + + QEMPWNVRM;QEMPWNM[RV];QEMPWGGVRM;QEMPWGGM[RV];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}M{I|L}[WP]QQM;[AG]NY{[YC]|[HE]}NVRM;[AG]NY{[YC]|[HE]}NM[RV] 6.7115;6.0832;5.9374;5.3091;3.2491;1.8103;1.182 +;-;-;-;-;-;- + 172 + 1 1.995 50897.2 1.0 5035 3671 8706 DOHH2_400M_050219_2,8708 DOHH2_400M_050219_2,8708,QEMPWNVRM True True QEMPWNVRM 49.924672 595.776660144329 1579079.5 8706.0 chr3:112128228-112130445|42|16.38|0.48|5.1|-|ENST00000495418|GCSAM,GCSAM;;nc|ENSG00000174500|Q8N6F7-3|GCSAM;;ENSG00000174500|ENST00000308910|GCSAM;;nc|ENSG00000174500|Q8N6F7-2|GCSAM;;chr3:112130519-112133092|43|17.12|0.46|5.23|-|ENST00000484193|GCSAM,GCSAM 7.6347120602925616 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8711 49.934 125.0 339440.0 25 0 44950.0 + 6915 EEFGRFASF 9 67 545.2536270266303 1088.4927011200605 2 545.2539550662041 MULTI CID FTMS 0 0 0 8710 356464.21875 0.4862599446474236 4 -0.0755348205566406 1 Unmodified _EEFGRFASF_ ENSG00000204287|ENST00000395388|HLA-DRA 43.85829265575387 0.0542763391141878 2 EE[WR]{M(Oxidation (M))|F}AS 7 3 36.559 0.0 0.0 3.3587 0.0 0.0 0.0 180.06729360600437 180.06729360600437 15.54576644454535 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.7614393726401688 0.0 EE[WR]{M(Oxidation (M))|F}AS 3.3587 - 78 1 1.995 40563.5 1.0 5036 3673 8710 DOHH2_400M_050219_2,8711 DOHH2_400M_050219_2,8711,EEFGRFASF True True EEFGRFASF 49.93387 545.253955066204 8924028.0 8710.0 ENSG00000204287|ENST00000395388|HLA-DRA 7.114065329233806 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8712 49.948 800.0 88678.0 25 0 11642.0 + 7936 ELRLRQRQWL 10 99 466.6083859355467 1396.80332840684 3 466.6079894900322 MULTI CID FTMS 0 0 0 8710 110141.578125 0.9856248785282732 -3 0.041107177734375 2 Unmodified _ELRLRQRQWL_ REV__ENST00000380254.6_1_8:28340871-28347825:-|nuORF;REV__ENST00000521548.5_1_8:28340871-28347759:-|nuORF 3.944395688203298 0.708391353636983 2 {I|L} 1 -1 11.594 0.0 0.0 0.83002 0.0 0.0 1265.70855409219 0.0 1265.70855409219 0.0 4.6040937697618745 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.83002 + + 21 + 1 1.995 64527.3 0.4199999868869781 5037 3673 8710 DOHH2_400M_050219_2,8712 DOHH2_400M_050219_2,8712,ELRLRQRQWL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8714 49.959 489.0 107990.0 25 0 12282.0 + 34173 SLMSHAIEL 9 84 500.76006965076806 999.505586368336 2 500.7604858279228 MULTI CID FTMS 0 0 0 8713 98859.828125 1.0 0 0.0 1 Unmodified _SLMSHAIEL_ ENSG00000137055|ENST00000397292|PLAA 32.30548876998284 0.1201446275138228 2 {[TV]|[{I|L}S]}[HA]{M(Oxidation (M))|F}A{I|L}E{I|L} 9 3 + 57.219 0.0 0.0 5.7247 5.7247 78.453 0.0 0.0 0.0 8.102554773050969 16.478174818886373 8.102554773050969 2.887254899964361 0 0.5 2.0 0.2887254899964357 0.0 {[TV]|[{I|L}S]}[HA]{M(Oxidation (M))|F}A{I|L}E{I|L};{[TV]|[{I|L}S]}[HA]MS{I|L}E{I|L};[HS]MA{I|L}S{I|L}E{I|L};[HA]{M(Oxidation (M))|F}A{I|L}S{I|L}E{I|L};[HS]AM{I|L}S{I|L}E{I|L};[HS]A{I|L}{M(Oxidation (M))|F}A{I|L}E{I|L};[HA]SM{I|L}S{I|L}E{I|L};[HA]S{I|L}{M(Oxidation (M))|F}A{I|L}E{I|L};[HS]A{I|L}MS{I|L}E{I|L};[HA]S{I|L}MS{I|L}E{I|L} 5.7247;5.4358;4.9141;4.3844;4.2875;4.2751;4.0832;4.0709;3.9863;3.7821 -;-;-;-;-;-;-;-;-;- 328 1 1.995 45949.2 1.0 5038 3674 8713 DOHH2_400M_050219_2,8714 DOHH2_400M_050219_2,8714,SLMSHAIEL True True SLMSHAIEL 49.95886 500.760485827923 489871.84375 8713.0 ENSG00000137055|ENST00000397292|PLAA 4.75152858098348 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8715 49.972 731.0 209490.0 25 0 19697.0 + 33896 SLFPNSPKW 9 131 538.2822219403982 1074.5498909475964 2 538.2819702029228 MULTI CID FTMS 0 0 0 8713 141995.71875 0.2401618160163374 -7 0.1731986999511718 2 Unmodified _SLFPNSPKW_ ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF 34.221707139014875 0.1071766711162635 2 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW 9 0 + 81.674 0.0 0.0 7.6008 7.6008 91.756 0.0 0.0 0.0 70.56479076621045 12.98332479720628 12.98332479720628 9.208187539523747 0 0.6989700043360187 2.0 0.7059771852360797 0.0 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]SPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNV{[NV]|[RG]}W;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGV{[NV]|[RG]}W;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[RD]G[NG]{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}GD[RP][NG]{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]V{[NV]|[RG]}W;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[Q{I|L}][QP]W;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[KG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[PG] 7.6008;6.7438;6.1835;4.7548;3.8978;3.7831;3.6893;3.3376;3.2899;3.1478 +;-;-;-;-;-;-;-;-;- + 1063 + 1 1.995 122956.6 1.0 5039 3674 8713 DOHH2_400M_050219_2,8715 DOHH2_400M_050219_2,8715,SLFPNSPKW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8718 49.985 404.0 294420.0 25 0 28717.0 + 10435 FTDVNSILRY 10 99 614.3221822499374 1226.6298115666748 2 614.3218261599541 MULTI CID FTMS 0 0 0 8717 236474.859375 0.4988309384529586 -5 0.0731430053710937 1 Unmodified _FTDVNSILRY_ ENSG00000136628|ENST00000366923|EPRS1 80.6760300276096 0.0165137828474802 2 {M(Oxidation (M))|F}TDVNS{I|L}{I|L}RY 10 0 + 87.137 0.0 0.0 7.1038 7.1038 90.076 0.0 0.0 0.0 58.20931833779112 9.163413326259118 9.163413326259118 9.164539485499262 0 1.2134679910804405 0.0 0.3807196863200844 1.2302046884880935 + + {M(Oxidation (M))|F}TDVNS{I|L}{I|L}RY;{M(Oxidation (M))|F}TDVGGS{I|L}{I|L}RY;{M(Oxidation (M))|F}TDV[VS]Q{I|L}RY;{M(Oxidation (M))|F}TDV[VS][AG]{I|L}RY;{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}][RK]VD{[ET]|[MV]};{M(Oxidation (M))|F}[WE][WK]{I|L}RY;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}V[RK][W{M(Oxidation (M))|F}]E;{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}][PA]Q{I|L}RY;{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}][RK]{M(Oxidation (M))|F}E[PA];{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}[RK][W{M(Oxidation (M))|F}]E 7.1038;6.3567;5.3606;4.6134;2.6621;2.1448;1.7146;0.85328;0.72582;0.61443 +;-;-;-;-;-;-;-;-;- + 403 + 1 1.995 92069.0 1.0 5040 3676 8717 DOHH2_400M_050219_2,8718 DOHH2_400M_050219_2,8718,FTDVNSILRY True True FTDVNSILRY 49.985395 614.321826159954 6277491.0 8717.0 ENSG00000136628|ENST00000366923|EPRS1 8.835111300150553 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8719 49.997 658.0 164820.0 25 0 28040.0 + 24467 MIDPTLLHY 9 120 551.7831461681525 1101.5517394031049 2 551.7830688357353 MULTI CID FTMS 0 0 0 8717 112997.0625 0.5337670303196707 -2 0.0279426574707031 2 Unmodified _MIDPTLLHY_ ENSG00000163618|ENST00000383710|CADPS;nc|ENSG00000163618|Q9ULU8-2|CADPS;nc|ENSG00000163618|Q9ULU8-3|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS 81.86404211737425 0.017065112157077 2 M{I|L}DPT{I|L}{I|L}HY 9 0 + 96.597 0.0 0.0 8.7692 8.7692 85.085 0.0 0.0 0.0 36.47817481888637 2.632414347745822 2.632414347745822 2.632414347745822 0 0.8494850021680094 2.0 1.1549471895720984 0.0 + + M{I|L}DPT{I|L}{I|L}HY;M{I|L}DPT{I|L}{I|L}NW;M{I|L}DPT{I|L}{I|L}YH;M{I|L}DPT{I|L}{I|L}GGW;M{I|L}DP[RV]{[RE]|[WV]}S;M{I|L}{[ET]|[MV]}[VP]{I|L}HY;M{I|L}{[ET]|[MV]}[VP]{I|L}NW;M{I|L}{[ET]|[MV]}[VP]{I|L}YH;M{I|L}D[W{I|L}][QP]{I|L}S;M[{M(Oxidation (M))|F}V]RH{I|L}HY 8.7692;8.5302;8.2569;7.6943;5.1441;5.1361;4.8971;4.6239;4.4255;2.2553 +;-;-;-;-;-;-;-;-;- + 659 + 1 1.995 85537.6 1.0 5041 3676 8717 DOHH2_400M_050219_2,8719 DOHH2_400M_050219_2,8719,MIDPTLLHY True True MIDPTLLHY 49.996853 551.783068835735 1332504.0 8717.0 nc|ENSG00000163618|Q9ULU8-3|CADPS;;nc|ENSG00000163618|Q9ULU8-4|CADPS;;ENSG00000163618|ENST00000383710|CADPS;;nc|ENSG00000163618|Q9ULU8-2|CADPS 7.820401509602864 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8720 50.004 416.0 112740.0 25 0 12045.0 + 33005 SENNIQTIF 9 93 533.2647969142416 1064.5150408952832 2 533.2657348513603 MULTI CID FTMS 0 0 0 8717 111799.7890625 0.4539783871313838 8 -0.3305397033691406 3 Unmodified _SENNIQTIF_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 46.020951573049366 0.0490941689151868 2 {NN|[MP]|[D{I|L}]|[EV]}TD{I|L}[QT]{I|L}{M(Oxidation (M))|F} 9 3 + 31.497 0.0 0.0 2.9588 2.9588 73.102 0.0 0.0 0.0 6.478174818886373 10.79551163692527 6.478174818886373 6.478174818886373 0 0.7429928190999391 0.6989700043360187 0.7887254899964358 0.7059771852360797 {NN|[MP]|[D{I|L}]|[EV]}TD{I|L}[QT]{I|L}{M(Oxidation (M))|F};{[QS]|[NT]}ND{I|L}[QT]{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}TD[WR]{I|L}{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[NS]{I|L}[QT]{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[ES]|[DT]|[{I|L}C]}[QT]{I|L}{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}[HC]{I|L}[QT]{I|L}{M(Oxidation (M))|F};{[QS]|[NT]}GGD{I|L}[QT]{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}WV{[RE]|[WV]}{I|L}{M(Oxidation (M))|F};[{I|L}T][WE]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}N{[ES]|[DT]|[{I|L}C]}[QT]{I|L}{M(Oxidation (M))|F} 2.9588;2.3502;2.0041;1.6655;1.543;1.4996;1.4852;1.2492;1.2115;0.76905 -;-;-;-;-;-;-;-;-;- 312 1 1.995 41662.5 1.0 5042 3676 8717 DOHH2_400M_050219_2,8720 DOHH2_400M_050219_2,8720,SENNIQTIF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8722 50.016 507.0 209290.0 25 0 14190.0 + 13794 HTDDPLTWDY 10 97 631.7697035934898 1261.5248542537795 2 631.7702514529228 MULTI CID FTMS 0 0 0 8721 159617.59375 0.0378032377769977 -9 0.1922683715820312 1 Unmodified _HTDDPLTWDY_ ENSG00000108651|ENST00000261708|UTP6;ENST00000583408.5_1_17:30207568-30228646:-|nuORF 88.95385435242217 0.009729780394035 2 [HT]DDP{I|L}TWDY 10 0 + 78.058 0.0 0.0 6.1876 6.1876 89.359 0.0 0.0 0.0 4.259687322722812 60.37691834842093 4.259687322722812 10.026975159433531 0 1.1861818737241734 0.0 1.885151878060192 0.0 + + [HT]DDP{I|L}TWDY;[WD]TY{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TWDY;{[WT]|[RM]}DY{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TEGDY;{[WT]|[RM]}DY{I|L}TEGDY;{[{M(Oxidation (M))|F}C]|[YS]}[WE]{I|L}TWDY;[NS][NS]Y{I|L}TWDY;[HT]DDP[VP]{[CT]|[{M(Oxidation (M))|F}G]}DY;[HT]DE[VP]TWDY 6.1876;5.3927;5.2126;5.1541;4.7349;4.6765;4.601;4.057;3.9081;3.8352 +;-;-;-;-;-;-;-;-;- + 838 1 1.995 83854.6 1.0 5043 3677 8721 DOHH2_400M_050219_2,8722 DOHH2_400M_050219_2,8722,HTDDPLTWDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8723 50.03 800.0 124200.0 25 0 9957.3 + -1 SFRRTRCCFCL 11 84 781.860796540224 1561.707040147248 2 782.8591796755791 MULTI CID FTMS 0 0 0 8721 109141.8515625 0.1566437999937029 -4 0.0755348205566406 2 3 Carbamidomethyl (C) _SFRRTRC(Carbamidomethyl (C))C(Carbamidomethyl (C))FC(Carbamidomethyl (C))L_ REV__ENSG00000134278|ENST00000409402|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-2|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-3|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-4|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-5|SPIRE1 3.5964929083625545 0.858179447565866 2 [HD]EAQQDA{M(Oxidation (M))|F}YQV 12 -1 75.959 0.0 0.0 4.8638 0.0 0.0 0.0 127.07932262968384 127.07932262968384 32.52288349991588 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 1.5669015600442575 [HD]EAQQDA{M(Oxidation (M))|F}YQV 4.8638 - 2180 1 1.995 74891.4 0.4300000071525574 5044 3677 8721 DOHH2_400M_050219_2,8723 DOHH2_400M_050219_2,8723,SFRRTRCCFCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8724 50.043 800.0 114580.0 25 0 9351.1 -1 0 92 965.956789872932 1929.899026812664 2 965.9564697146416 MULTI CID FTMS 0 0 0 8721 98904.4140625 0.6757939872649437 -1 0.028656005859375 3 2 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD{[QV]|[N{I|L}]|[RA]|[KV]}G[HN]YQ{[TV]|[{I|L}S]} 17 -1 + 71.406 0.0 0.0 3.7 3.7 67.069 0.0 0.0 0.0 0.1177837249283584 0.1177837249283584 0.1177837249283584 0.1177837249283584 0 1.805462187404089 0.0 0.6803115997617928 1.524227503252014 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD{[QV]|[N{I|L}]|[RA]|[KV]}G[HN]YQ{[TV]|[{I|L}S]};[NP]{I|L}NA[HN]G{[QV]|[N{I|L}]|[RA]|[KV]}DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[RK][HN]YQ{[TV]|[{I|L}S]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NW{[QV]|[N{I|L}]|[RA]|[KV]}G[HN]YQ{[TV]|[{I|L}S]};[NP]{I|L}NA[HN]G{[QV]|[N{I|L}]|[RA]|[KV]}WN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NA[{I|L}V][YC(Carbamidomethyl (C))]DYQ{[TV]|[{I|L}S]};[NP]{I|L}NAD[YC(Carbamidomethyl (C))][{I|L}V]AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DYQ{[TV]|[{I|L}S]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NA[WR]G[HN]YQ{[TV]|[{I|L}S]};[NP]{I|L}NAD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.7;3.6939;3.5074;3.3515;3.3446;3.1961;3.1892;3.1314;3.1314;3.1245 -;-;-;-;-;-;-;-;-;- 1787 + 1 1.995 66958.8 0.3899999856948852 5045 3677 8721 DOHH2_400M_050219_2,8724 DOHH2_400M_050219_2,8724, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8725 50.051 414.0 189950.0 25 0 29543.0 -1 0 46 1005.5056405550474 2008.9967281768947 2 1005.505541980267 MULTI CID FTMS 0 0 0 8721 112685.5234375 0.90425454083357 -2 0.0327301025390625 4 2 [H{I|L}]A 3 -1 29.437 0.0 0.0 1.4653 0.0 0.0 0.0 1684.792632067773 1684.792632067773 4.365137424788937 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [H{I|L}]A 1.4653 - 143 1 1.995 62464.3 1.0 5046 3677 8721 DOHH2_400M_050219_2,8725 DOHH2_400M_050219_2,8725, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8727 50.059 324.0 137210.0 25 0 12502.0 + 16700 KESEVFYEL 9 71 572.2820428159287 1142.5495326986572 2 572.2824584841728 MULTI CID FTMS 0 0 0 8726 103480.015625 0.2795685420935335 6 -0.2552452087402344 1 Unmodified _KESEVFYEL_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 24.99096001346401 0.2132109383330889 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[PA]{M(Oxidation (M))|F}YE{I|L} 9 3 + 44.459 0.0 0.0 3.8912 3.8912 84.538 0.0 0.0 0.0 5.659387198976589 30.96455617469936 5.659387198976589 44.45940619637945 0 0.6861818737241735 0.0 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[PA]{M(Oxidation (M))|F}YE{I|L} 3.8912 - 70 1 1.995 40622.6 1.0 5047 3678 8726 DOHH2_400M_050219_2,8727 DOHH2_400M_050219_2,8727,KESEVFYEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8728 50.073 800.0 106600.0 25 0 15902.0 + 37167 TIDKATGILLY 11 111 604.3503499726129 1206.6861470120257 2 604.3505126833916 MULTI CID FTMS 0 0 0 8726 113571.8828125 1.0 0 0.0 2 Unmodified _TIDKATGILLY_ ENSG00000172053|ENST00000306125|QARS1;ENST00000479495.5_1_3:49140063-49142467:-|nuORF;ENST00000482438.2_1_3:49141637-49142166:-|nuORF;nc|ENSG00000172053|P47897-2|QARS1 49.74193281347159 0.1190592179673825 2 [{I|L}T]QKD{I|L}T{I|L}{I|L}Y 10 5 + 90.208 0.0 0.0 7.4757 7.4757 88.451 0.0 0.0 0.0 17.498482438104205 13.037275116073346 13.037275116073346 6.817496819840656 0 1.0 2.0 1.4802046884880935 0.0 [{I|L}T]QKD{I|L}T{I|L}{I|L}Y;[{I|L}T]QKDT{I|L}{I|L}{I|L}Y;[{I|L}T]QK{I|L}DT{I|L}{I|L}Y;[{I|L}T]QKD{I|L}{I|L}T{I|L}Y;[{I|L}T][AG]KD{I|L}T{I|L}{I|L}Y;[{I|L}T]Q[VS]G{I|L}T{I|L}{I|L}Y;[{I|L}T]Q{I|L}KDT{I|L}{I|L}Y;[{I|L}T][AG]KDT{I|L}{I|L}{I|L}Y;[{I|L}T]Q[VS]GT{I|L}{I|L}{I|L}Y;[{I|L}T]QK{I|L}D{I|L}T{I|L}Y 7.4757;6.9107;6.8107;6.7907;6.7162;6.706;6.4153;6.1512;6.141;6.1257 -;-;-;-;-;-;-;-;-;- 4041 1 1.995 64804.1 0.449999988079071 5048 3678 8726 DOHH2_400M_050219_2,8728 DOHH2_400M_050219_2,8728,TIDKATGILLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8729 50.087 800.0 143770.0 25 0 19959.0 + 24343 MELPDYRQW 9 85 619.2870597296629 0 619.2875854372978 PEAK CID FTMS 0 0 0 8726 104855.7734375 0.7813404121720974 -1 0.0466384887695312 3 Unmodified _MELPDYRQW_ ENSG00000119013|ENST00000237889|NDUFB3 38.17557092003332 0.0706864996250298 2 E{I|L}PDW 5 4 31.454 0.0 0.0 2.5436 0.0 0.0 131.0427103372852 462.2101229303344 593.2528332676196 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 E{I|L}PDW 2.5436 - 66 + 1 1.995 86280.0 0.4399999976158142 5049 3678 8726 DOHH2_400M_050219_2,8729 DOHH2_400M_050219_2,8729,MELPDYRQW True True MELPDYRQW 50.087032 619.287585437298 832936.625 8726.0 ENSG00000119013|ENST00000237889|NDUFB3 7.119574228922526 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8730 50.101 800.0 103150.0 25 0 13308.0 + 20851 KPFEKFLL 8 117 511.3076861526732 1020.6008193721464 2 511.3091613650322 MULTI CID FTMS 0 0 0 8726 92222.296875 0.7006399058315405 -3 0.0793685913085937 4 Unmodified _LMEKFKIL_ ENSG00000136051|ENST00000332180|WASHC4;nc|ENSG00000136051|Q2M389-2|WASHC4;ENST00000311317.8_1_12:105501518-105541426:+|nuORF 48.345845343767074 0.1470278396477103 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EK{M(Oxidation (M))|F}K{I|L}{I|L} 8 0 + 55.015 0.0 0.0 5.3905 5.3905 83.317 0.0 0.0 0.0 16.197887582883936 34.25759390300961 16.197887582883936 9.018637558036673 0 1.0440228147639203 1.2218487496163564 0.7742275032520141 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EK{M(Oxidation (M))|F}K{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EKK{M(Oxidation (M))|F}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}K{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}PK{I|L}{I|L};[KP]YYPK{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QYPK{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}PK{M(Oxidation (M))|F}{I|L}{I|L};[KP][NP]DPK{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}MK{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[SG]P{M(Oxidation (M))|F}K{I|L}{I|L} 5.3905;4.5068;3.4627;2.849;2.7597;2.6567;2.579;2.5332;2.3815;2.3628 +;-;-;-;-;-;-;-;-;- + 821 1 1.995 65578.5 0.3799999952316284 5050 3678 8726 DOHH2_400M_050219_2,8730 DOHH2_400M_050219_2,8730,LMEKFKIL False False KPFEKFLL 50.100863 511.309161365032 807714.125 8726.0 ENSG00000136051|ENST00000332180|WASHC4;;nc|ENSG00000136051|Q2M389-2|WASHC4;;ENST00000311317.8_1_12:105501518-105541426:+|nuORF 1.3779833912849426 2.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8732 50.115 605.0 127260.0 25 0 7017.8 + 38593 TTDLFGRDLSY 11 102 644.3142892519643 1286.6140255707285 2 644.3143188357353 MULTI CID FTMS 0 0 0 8731 118152.4921875 0.0794085196100966 13 -0.5850906372070312 1 Unmodified _TTDLFGRDLSY_ ENSG00000169813|ENST00000682386|HNRNPF 59.012897905743536 0.0731512788572055 2 {[DS]|[MA]|[CV]|TT}D{I|L}{[NV]|[RG]}[YV]{I|L}SY 11 3 + 44.051 0.0 0.0 3.4238 3.4238 71.117 0.0 0.0 0.0 3.543582521789368 3.543582521789368 3.543582521789368 3.543582521789368 0 2.3807196863200843 0.0 1.0356668758921828 0.0 {[DS]|[MA]|[CV]|TT}D{I|L}{[NV]|[RG]}[YV]{I|L}SY;{[DS]|[MA]|[CV]|TT}D{I|L}{M(Oxidation (M))|F}[DV][WK]Y;{[DS]|[MA]|[CV]|TT}D{I|L}{M(Oxidation (M))|F}G[RH]H{[CT]|[{M(Oxidation (M))|F}G]};{NN|[MP]|[D{I|L}]|[EV]}TT{[NV]|[RG]}[YV]{I|L}SY;{NN|[MP]|[D{I|L}]|[EV]}M[RK]{[{M(Oxidation (M))|F}D]|MM}{I|L}SY;{NN|[MP]|[D{I|L}]|[EV]}MA{[NV]|[RG]}[YV]{I|L}SY;{NN|[MP]|[D{I|L}]|[EV]}T[WE][{I|L}V]{I|L}D[PS];{[QN]|[E{I|L}]|[KN]}ST{[NV]|[RG]}[YV]{I|L}SY;{[DS]|[MA]|[CV]|TT}D{I|L}{M(Oxidation (M))|F}[DV][YK]W;[PS]D{I|L}[KC]{[NV]|[RG]}{I|L}D[PS] 3.4238;3.1483;2.149;2.053;2.0482;1.8806;1.8678;1.8677;1.8243;1.8166 -;-;-;-;-;-;-;-;-;- 749 1 1.995 61920.7 1.0 5051 3679 8731 DOHH2_400M_050219_2,8732 DOHH2_400M_050219_2,8732,TTDLFGRDLSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8733 50.118 155.0 332460.0 25 0 40277.0 + + 11104 GEFKALQEW 9 89 554.2769396267704 1106.5393263203407 2 554.2765380740166 MULTI CID FTMS 0 0 0 8731 274815.09375 0.5585953283094952 -2 0.0965957641601562 2 Unmodified _GEFQLLTNW_ nc|ENSG00000181222|P24928|POLR2A;ENSG00000181222|ENST00000674977|POLR2A 43.77239144664712 0.0547478964384323 2 {[DA]|[EG]}{M(Oxidation (M))|F}GA{I|L}[KA]EW 10 -1 + 75.865 0.0 0.0 6.856 6.856 86.527 0.0 0.0 0.0 6.49166239860314 6.49166239860314 6.49166239860314 6.49166239860314 0 0.8252574989159953 1.3979400086720375 1.424742501084005 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}GA{I|L}[KA]EW;{[DA]|[EG]}A{I|L}AK{M(Oxidation (M))|F}GEW;{[DA]|[EG]}{M(Oxidation (M))|F}Q{I|L}[KA]EW;{[DA]|[EG]}{M(Oxidation (M))|F}[KA]{I|L}AGEW;{[DA]|[EG]}{M(Oxidation (M))|F}[KA]{I|L}QEW;W{M(Oxidation (M))|F}GARREW;{[DA]|[EG]}{M(Oxidation (M))|F}[KA]{I|L}AW{[DA]|[EG]};{[DA]|[EG]}{M(Oxidation (M))|F}RRAWW;{[CT]|[{M(Oxidation (M))|F}G]}EGA{I|L}[KA]EW;W{M(Oxidation (M))|F}QRREW 6.856;6.2694;6.2657;6.2486;5.6583;5.4556;5.278;5.1408;4.961;4.8763 -;-;-;-;-;-;-;-;-;- 456 + 1 1.995 45601.3 1.0 5052 3679 8731 DOHH2_400M_050219_2,8733 DOHH2_400M_050219_2,8733,GEFQLLTNW False False GEFKALQEW 50.118427 554.276538074017 3021961.0 8731.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A 6.293232758839925 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8734 50.132 800.0 92892.0 25 0 7720.5 + 564 AEIIKGELW 9 110 529.797265620822 1057.579978308444 2 529.7981445193291 MULTI CID FTMS 0 0 0 8731 98602.8203125 1.0 0 0.0 3 Unmodified _AEIIKGELW_ ENSG00000187189|ENST00000420283|TSPYL4 38.17557092003332 0.0854718145212029 2 {[CP]|[EA]}{I|L}{I|L}C 5 5 35.7 0.0 0.0 3.3756 0.0 0.0 0.0 525.3017672174436 525.3017672174436 1.84459443819334 0.0 0.0 0.0 0 1.586696871556164 0.0 0.0 0.0 {[CP]|[EA]}{I|L}{I|L}C 3.3756 - 546 + 1 1.995 64099.7 0.4199999868869781 5053 3679 8731 DOHH2_400M_050219_2,8734 DOHH2_400M_050219_2,8734,AEIIKGELW True True AEIIKGELW 50.132261 529.798144519329 633172.5625 8731.0 ENSG00000187189|ENST00000420283|TSPYL4 4.949587980906169 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8736 50.137 10.0 5196300.0 25 0 291920.0 -1 0 70 881.412242313419 1760.809931693638 2 881.9136840701103 MULTI CID FTMS 0 0 0 8735 6322592.5 0.4693278595919264 -3 0.1279792785644531 1 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YEV 14 -1 84.862 0.0 0.0 4.8195 0.0 0.0 0.0 127.06939882755582 127.06939882755582 63.71600731282193 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YEV 4.8195 - 857 1 1.995 44552.2 1.0 5054 3680 8735 DOHH2_400M_050219_2,8736 DOHH2_400M_050219_2,8736, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8737 50.139 96.0 699980.0 25 0 189760.0 -1 0 55 670.672945169691 2008.997006109273 3 671.0071288943291 MULTI CID FTMS 0 0 0 8735 448245.5 0.7409624301828063 1 -0.0068931579589843 2 2 {I|L}H{I|L}Q{[CP]|[EA]} 6 -1 32.224 0.0 0.0 1.604 0.0 0.0 1299.5805199453896 0.0 1299.5805199453896 0.0 7.501225267834002 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}H{I|L}Q{[CP]|[EA]} 1.604 - 102 1 1.995 57602.1 1.0 5055 3680 8735 DOHH2_400M_050219_2,8737 DOHH2_400M_050219_2,8737, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8739 50.151 554.0 151880.0 25 0 34689.0 + 7775 ELGIFAKKTI 10 82 560.340494244839 1118.6664355564778 2 560.3402587771416 MULTI CID FTMS 0 0 0 8738 176308.28125 0.4810813350471449 -2 0.0382766723632812 1 Unmodified _ELGIFAKKTI_ REV__ENSG00000198799|ENST00000361127|LRIG2 1.4819007175156935 0.719781833666733 2 {I|L} 1 -1 10.485 0.0 0.0 0.93724 0.0 0.0 987.571233995734 0.0 987.571233995734 0.0 8.89075625191822 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.93724 + + 6 + 1 1.995 70821.6 1.0 5056 3681 8738 DOHH2_400M_050219_2,8739 DOHH2_400M_050219_2,8739,ELGIFAKKTI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8740 50.162 598.0 128210.0 25 0 8379.5 -1 0 87 887.4128753554018 1772.8111977776034 2 888.4071533083916 MULTI CID FTMS 0 0 0 8738 115818.65625 0.3498429141555098 -9 0.2144699096679687 2 2 {M(Oxidation (M))|F}ADQQAE[DG]C(Carbamidomethyl (C)){I|L} 11 -1 64.06 0.0 0.0 3.6135 0.0 0.0 520.2960088231424 0.0 520.2960088231424 0.0 35.64381711330046 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.7614393726401688 {M(Oxidation (M))|F}ADQQAE[DG]C(Carbamidomethyl (C)){I|L} 3.6135 - 1247 + 1 1.995 58163.9 1.0 5057 3681 8738 DOHH2_400M_050219_2,8740 DOHH2_400M_050219_2,8740, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8741 50.176 800.0 103140.0 25 0 13250.0 + 18017 KSELGLNFY 9 108 535.7800105441559 1069.5454681551116 2 535.7788574099541 MULTI CID FTMS 0 0 0 8738 102949.1640625 0.8488341930112453 -7 0.1914710998535156 3 Unmodified _KSELGLNFY_ ENSG00000198839|ENST00000361822|ZNF277 55.50274090549119 0.0285720310785888 2 [KS]E{I|L}G{I|L}N{M(Oxidation (M))|F}Y 9 0 + 63.91 0.0 0.0 5.9754 5.9754 78.748 0.0 0.0 0.0 2.302046884880937 16.478174818886373 2.302046884880937 2.302046884880937 0 0.9247425010840048 0.0 1.7104093769761874 0.4247425010840047 + + [KS]E{I|L}G{I|L}N{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}KSG{I|L}N{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}K{I|L}G{I|L}N{M(Oxidation (M))|F}Y;{[VA]|[{I|L}G]}{[CA]|SS}{I|L}G{I|L}N{M(Oxidation (M))|F}Y;{[VA]|[{I|L}G]}{[TV]|[{I|L}S]}SG{I|L}N{M(Oxidation (M))|F}Y;{[VA]|[{I|L}G]}E[KS]{I|L}N{M(Oxidation (M))|F}Y;[VS]{[SA]|[TG]}{I|L}G{I|L}N{M(Oxidation (M))|F}Y;[KS]E{I|L}G{I|L}GG{M(Oxidation (M))|F}Y;[VS][{I|L}A]SG{I|L}N{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}KSG{I|L}GG{M(Oxidation (M))|F}Y 5.9754;5.7602;5.6642;5.6109;5.4034;5.3294;5.2087;5.1145;5.0013;4.8992 +;-;-;-;-;-;-;-;-;- + 350 1 1.995 65814.3 0.4300000071525574 5058 3681 8738 DOHH2_400M_050219_2,8741 DOHH2_400M_050219_2,8741,KSELGLNFY True True KSELGLNFY 50.175737 535.778857409954 1426889.125 8738.0 ENSG00000198839|ENST00000361822|ZNF277 5.632438659667969 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8742 50.19 800.0 86126.0 25 0 7475.4 + -1 SIMMMNVKFLW 11 91 708.3476340539719 1414.6807151747437 2 708.3486816287041 MULTI CID FTMS 0 0 0 8738 96786.6171875 1.0 0 0.0 4 Oxidation (M) _SIM(Oxidation (M))MMNVKFLW_ REV__ENST00000610146.1_1_1:155951728-155952130:+|nuORF 12.240655878213236 0.7805268987462184 2 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}EN{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK 12 -1 + 105.49 0.0 0.0 7.4566 7.4566 90.058 0.0 0.0 0.0 88.80510344348764 11.611814434466195 11.611814434466195 9.098233696509112 0 1.4604093769761874 2.0 0.6549471895720985 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}EN{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EGG{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EN{M(Oxidation (M))|F}VA[WR]{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}E[KC]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VDK;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EGG{M(Oxidation (M))|F}VA[WR]{M(Oxidation (M))|F};[YT][DP]N{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}HAV{M(Oxidation (M))|F}N[DP][{M(Oxidation (M))|F}V];[YT][DP]GG{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK;[YT]YY{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}HAV{M(Oxidation (M))|F}YY[{M(Oxidation (M))|F}V] 7.4566;6.8135;5.5011;4.891;4.8558;4.0606;3.9093;3.4175;3.3462;3.1928 -;-;-;-;-;-;-;-;-;- 293 + 1 1.995 58314.8 0.4199999868869781 5059 3681 8738 DOHH2_400M_050219_2,8742 DOHH2_400M_050219_2,8742,SIMMMNVKFLW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8743 50.202 713.0 83781.0 25 0 12032.0 -1 SLGHMIVTL 9 89 493.770897340119 0 493.7707092165947 PEAK CID FTMS 0 0 0 8738 87312.640625 0.8921704109796815 1 -0.0948944091796875 5 Oxidation (M) _SLGHM(Oxidation (M))IVTL_ ENSG00000135577|ENST00000258042|NMBR 26.88365393820708 0.1386685954232994 2 KGD 3 -1 11.684 0.0 0.0 1.1856 0.0 0.0 600.2941922859037 82.06694971256093 682.3611419984646 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6022338482433752 0.0 KGD 1.1856 - 71 + 1 1.995 51017.7 1.0 5060 3681 8738 DOHH2_400M_050219_2,8743 DOHH2_400M_050219_2,8743,SLGHMIVTL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8744 50.216 800.0 83656.0 25 0 5461.5 + 672 AEMLRSISF 9 97 527.2733288383922 1052.5321047435843 2 527.2731811404228 MULTI CID FTMS 0 0 0 8738 112684.6015625 1.0 0 0.0 6 Unmodified _AEMLRSISF_ ENSG00000101138|ENST00000217109|CSTF1 39.92294525591503 0.0758795494663778 2 {[CP]|[EA]}M{I|L}RS{I|L}S{M(Oxidation (M))|F} 9 0 + 49.746 0.0 0.0 4.7263 4.7263 85.137 0.0 0.0 0.0 4.762036441594191 33.112431371158735 4.762036441594191 15.31743128760553 0 2.3182503180159344 0.0 0.3252574989159953 0.0 + + {[CP]|[EA]}M{I|L}RS{I|L}S{M(Oxidation (M))|F};[TA][{I|L}T][DV]S{I|L}S{M(Oxidation (M))|F};{[CP]|[EA]}M{I|L}R{[WT]|[RM]}{M(Oxidation (M))|F};[{I|L}T][TA][DV]S{I|L}S{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[VS][DV]S{I|L}S{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[RK][{M(Oxidation (M))|F}V]D{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}[YR][{I|L}T][PG];{[CP]|[EA]}{M(Oxidation (M))|F}[YR][PG]T{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}[YR][TA][VP] 4.7263;3.271;2.7123;2.2415;2.1228;2.0131;1.2059;1.1584;0.46656 +;-;-;-;-;-;-;-;- + 188 1 1.995 56981.0 0.449999988079071 5061 3681 8738 DOHH2_400M_050219_2,8744 DOHH2_400M_050219_2,8744,AEMLRSISF True True AEMLRSISF 50.215766 527.273181140423 506695.0625 8738.0 ENSG00000101138|ENST00000217109|CSTF1 6.816292921702067 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8745 50.231 800.0 62685.0 25 0 5067.8 + 7274 EETPNILRI 9 95 542.8032046125749 1083.5918562919496 2 542.8034545779228 MULTI CID FTMS 0 0 0 8738 105335.9296875 1.0 0 0.0 7 Unmodified _EETPNILRI_ ENSG00000156675|ENST00000330843|RAB11FIP1;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;ENST00000523182.5_1_8:37720415-37730726:-|nuORF;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1 43.85829265575387 0.0542763391141878 2 EETPN{I|L}{I|L}R{I|L} 9 0 + 69.307 0.0 0.0 6.396 6.396 88.612 0.0 0.0 0.0 57.52426364892641 10.590992953673537 10.590992953673537 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + + EETPN{I|L}{I|L}R{I|L};EETPGG{I|L}{I|L}R{I|L};EET{I|L}[NP]{I|L}R{I|L} 6.396;5.5463;4.6656 +;-;- + 105 + 1 1.995 43418.3 0.4199999868869781 5062 3681 8738 DOHH2_400M_050219_2,8745 DOHH2_400M_050219_2,8745,EETPNILRI True True EETPNILRI 50.231058 542.803454577923 469652.1875 8738.0 nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;;ENST00000523182.5_1_8:37720415-37730726:-|nuORF;;ENSG00000156675|ENST00000330843|RAB11FIP1 5.996951103210449 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8746 50.234 150.0 205820.0 25 0 21276.0 + 7012 EEKPIEIQW 9 61 586.3032610460064 1170.5919691588126 2 586.8041869997978 MULTI CID FTMS 0 0 0 8738 95132.859375 0.2662855266966362 -2 0.0382766723632812 8 Unmodified _EEKPIEIQW_ ENSG00000113460|ENST00000336767|BRIX1 11.640296217721598 0.521594087909532 2 QW 2 7 19.196 0.0 0.0 1.6398 0.0 0.0 838.4438806351783 0.0 838.4438806351783 0.0 2.9980376447570443 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + QW 1.6398 + + 36 + 1 1.995 28754.4 1.0 5063 3681 8738 DOHH2_400M_050219_2,8746 DOHH2_400M_050219_2,8746,EEKPIEIQW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8748 50.24 92.0 590930.0 25 0 90627.0 + 33897 SLFPNSPKW 9 68 538.2822219403982 1074.5498909475964 2 538.2823364138603 MULTI CID FTMS 0 0 0 8747 470480.375 0.795738225452994 1 -0.0651321411132812 1 Unmodified _SLFPNSPKW_ ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF 22.774965066869 0.2414061210083823 2 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW 9 0 + 74.927 0.0 0.0 6.9728 6.9728 90.479 0.0 0.0 0.0 50.059034764951846 12.98332479720628 12.98332479720628 9.208187539523747 0 0.7302046884880937 2.0 0.0 0.0 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]SPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PN[DV]{[{M(Oxidation (M))|F}H]|[RQ]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGG[DV]{[{M(Oxidation (M))|F}H]|[RQ]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG][DV]{[{M(Oxidation (M))|F}H]|[RQ]} 6.9728;6.1159;5.8358;4.4135;3.5566;3.2764 +;-;-;-;-;- + 250 + 1 1.995 47559.3 1.0 5064 3682 8747 DOHH2_400M_050219_2,8748 DOHH2_400M_050219_2,8748,SLFPNSPKW False True SLFPNSPKW 50.239953 538.28233641386 18515398.5 8747.0 ENST00000531200.1_1_11:102398162-102401431:-|nuORF;;ENST00000533366.5_1_11:102395628-102401431:-|nuORF;;ENSG00000137673|ENST00000260227|MMP7 8.327314058939615 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8749 50.251 653.0 211000.0 25 0 17954.0 + 10436 FTDVNSILRY 10 98 614.3221822499374 1226.6298115666748 2 614.3220703005791 MULTI CID FTMS 0 0 0 8747 176224.234375 0.3717355005253839 1 -0.0651321411132812 2 Unmodified _FTDVNSILRY_ ENSG00000136628|ENST00000366923|EPRS1 90.13494162714682 0.0093239051209448 2 {M(Oxidation (M))|F}TDVNS{I|L}{I|L}RY 10 0 + 83.3 0.0 0.0 6.791 6.791 88.851 0.0 0.0 0.0 51.62707868647438 12.35863111416478 12.35863111416478 9.164539485499247 0 1.174742501084005 0.0 0.3494850021680094 1.548455006504028 + + {M(Oxidation (M))|F}TDVNS{I|L}{I|L}RY;{M(Oxidation (M))|F}TDVGGS{I|L}{I|L}RY;{M(Oxidation (M))|F}[WE][WK]{I|L}RY 6.791;6.0438;2.4132 +;-;- + 364 + 1 1.995 104182.2 1.0 5065 3682 8747 DOHH2_400M_050219_2,8749 DOHH2_400M_050219_2,8749,FTDVNSILRY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8750 50.26 476.0 59291.0 25 0 2940.0 -1 0 57 600.5934913629275 1798.7586446889825 3 600.9278442263603 MULTI CID FTMS 0 0 0 8747 365691.40625 1.0 0 0.0 3 2 [QA]HD 4 -1 23.94 0.0 0.0 1.3309 0.0 0.0 0.0 1344.5524199118008 1344.5524199118008 1.064921830680703 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 [QA]HD 1.3309 - 30 + 1 1.995 31264.4 1.0 5066 3682 8747 DOHH2_400M_050219_2,8750 DOHH2_400M_050219_2,8750, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8751 50.263 172.0 368870.0 25 0 22313.0 -1 0 84 845.8935177255889 1689.7724825179778 2 845.8944579958916 MULTI CID FTMS 0 0 0 8747 317274.21875 0.745739721447224 -1 0.0948944091796875 4 2 {[QV]|[N{I|L}]|[RA]|[KV]}YCSQQNA{M(Oxidation (M))|F}Y 11 -1 104.62 0.0 0.0 6.1913 0.0 0.0 0.0 355.1958114363685 355.1958114363685 68.2444750633436 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 1.4049471895720984 2.7376954943324545 {[QV]|[N{I|L}]|[RA]|[KV]}YCSQQNA{M(Oxidation (M))|F}Y 6.1913 - 5757 1 1.995 49164.1 1.0 5067 3682 8747 DOHH2_400M_050219_2,8751 DOHH2_400M_050219_2,8751, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8752 50.27 375.0 223040.0 25 0 25342.0 + 420 AEEKPIEIQW 10 101 621.822150702567 1241.629748471934 2 621.8229858279228 MULTI CID FTMS 0 0 0 8747 152684.953125 0.5972389644173 -1 0.0948944091796875 5 Unmodified _AEEKPIEIQW_ ENSG00000113460|ENST00000336767|BRIX1 78.06048673739656 0.0186573233964999 2 [{I|L}P]E{I|L}QSE{I|L}QW 10 5 + 82.942 0.0 0.0 6.6801 6.6801 79.161 0.0 0.0 0.0 1.377720968065006 10.542260453564268 1.377720968065006 0.7918124604762511 0 0.7742275032520141 1.0 1.1549471895720984 0.3807196863200844 [{I|L}P]E{I|L}QSE{I|L}QW;[{I|L}P]EKEAE{I|L}QW;{[QN]|[E{I|L}]|[KN]}P{I|L}QSE{I|L}QW;{[QN]|[E{I|L}]|[KN]}PKEAE{I|L}QW;[{I|L}P]E{I|L}[SG]AE{I|L}QW;[{I|L}P]E{I|L}QSE{I|L}[AG]W;[{I|L}P]E{I|L}[AG]SE{I|L}QW;[{I|L}P]EKEAE{I|L}[AG]W;{[QN]|[E{I|L}]|[KN]}P{I|L}[SG]AE{I|L}QW;{[QN]|[E{I|L}]|[KN]}P{I|L}[AG]SE{I|L}QW 6.6801;6.6163;6.5691;6.5054;5.981;5.942;5.942;5.8782;5.87;5.831 -;-;-;-;-;-;-;-;-;- 2805 1 1.995 70865.6 1.0 5068 3682 8747 DOHH2_400M_050219_2,8752 DOHH2_400M_050219_2,8752,AEEKPIEIQW True True AEEKPIEIQW 50.269903 621.822985827923 1544429.875 8747.0 ENSG00000113460|ENST00000336767|BRIX1 4.388001998265584 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8753 50.278 433.0 139730.0 25 0 31810.0 + 194 AAPLPLRRSR 10 64 568.8532116630146 1135.691870392829 2 568.8534423708916 MULTI CID FTMS 0 0 0 8747 132150.625 0.6608498775523854 -1 0.0948944091796875 6 Unmodified _AAPLPLRRSR_ REV__ENSG00000083814|ENST00000317398|ZNF671;REV__ENST00000594803.1_1_19:58233776-58238980:-|nuORF;REV__ENST00000599961.1_1_19:58234694-58238980:-|nuORF 1.844237919475145 0.7181058121064529 2 {I|L} 1 -1 1.5938 0.0 0.0 0.14034 0.0 0.0 783.4801832363822 236.1045931451781 1019.5847763815603 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.14034 + + 4 + 1 1.995 51099.5 1.0 5069 3682 8747 DOHH2_400M_050219_2,8753 DOHH2_400M_050219_2,8753,AAPLPLRRSR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8754 50.285 432.0 183440.0 25 0 31044.0 -1 0 66 900.3862697430249 1798.7579865528496 2 900.8885375857352 MULTI CID FTMS 0 0 0 8747 125368.859375 1.0 0 0.0 7 2 QAED 4 -1 31.938 0.0 0.0 1.7756 0.0 0.0 1019.4346966131995 333.13220171712123 1352.5668983303208 0.0 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 QAED 1.7756 - 51 + 1 1.995 60189.8 1.0 5070 3682 8747 DOHH2_400M_050219_2,8754 DOHH2_400M_050219_2,8754, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8755 50.299 800.0 150180.0 25 0 26865.0 + 42393 VTDSGPTFNYL 11 138 607.2903091605759 1212.5660653879518 2 607.2910034060478 MULTI CID FTMS 0 0 0 8747 104930.609375 0.362275114121997 -4 0.1831283569335937 8 Unmodified _VTDSGPTFNYL_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 60.07390631473393 0.0688452368411198 2 [TP]{M(Oxidation (M))|F}NGS{[ES]|[DT]|[{I|L}C]}VY{I|L} 11 6 + 67.491 0.0 0.0 5.566 5.566 76.998 0.0 0.0 0.0 4.484263328639472 16.575773191777927 4.484263328639472 2.217813632786985 0 0.5 0.619788758288394 1.1036348176228747 1.360924374808178 [TP]{M(Oxidation (M))|F}NGS{[ES]|[DT]|[{I|L}C]}VY{I|L};[TP]{M(Oxidation (M))|F}NGKC(Carbamidomethyl (C))NY{I|L};[MT]{I|L}NGS{[ES]|[DT]|[{I|L}C]}VY{I|L};[TP]{I|L}C(Carbamidomethyl (C))W{M(Oxidation (M))|F}NY{I|L};[TP]{M(Oxidation (M))|F}NGSV{[ES]|[DT]|[{I|L}C]}Y{I|L};[MT]{I|L}NGKC(Carbamidomethyl (C))NY{I|L};[MT]{I|L}NGSV{[ES]|[DT]|[{I|L}C]}Y{I|L};[TP]GSD{[TV]|[{I|L}S]}{M(Oxidation (M))|F}NY{I|L};[TP]{M(Oxidation (M))|F}NGKC(Carbamidomethyl (C))GGY{I|L};[TP]GS{M(Oxidation (M))|F}N{[ES]|[DT]|[{I|L}C]}VY{I|L} 5.566;5.3831;5.1962;5.16;5.0658;5.0133;4.696;4.6318;4.6273;4.5696 -;-;-;-;-;-;-;-;-;- 6525 1 1.995 89055.9 0.4399999976158142 5071 3682 8747 DOHH2_400M_050219_2,8755 DOHH2_400M_050219_2,8755,VTDSGPTFNYL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8757 50.304 14.0 3711000.0 25 0 303360.0 + 13795 HTDDPLTWDY 10 68 631.7697035934898 1261.5248542537795 2 631.7699462771416 MULTI CID FTMS 0 0 0 8756 3863975.25 0.9151295399739384 -3 0.1669197082519531 1 Unmodified _HTDDPLTWDY_ ENSG00000108651|ENST00000261708|UTP6;ENST00000583408.5_1_17:30207568-30228646:-|nuORF 65.23502041540118 0.0228537820337083 2 {[WT]|[RM]}DY{I|L}TWDY 9 3 + 81.336 0.0 0.0 6.4474 6.4474 88.838 0.0 0.0 0.0 11.760912590556812 16.478174818886373 11.760912590556812 9.208187539523747 0 0.9247425010840048 1.3010299956639813 1.3494850021680094 0.0 {[WT]|[RM]}DY{I|L}TWDY;{[WT]|[RM]}DY{I|L}T{[DA]|[EG]}DY;[WD]TY{I|L}TWDY;[HT]DDP{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TWDY;{[WT]|[RM]}DY{I|L}G{[ET]|[MV]}DY;{[{M(Oxidation (M))|F}C]|[YS]}[WE]{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}T{[DA]|[EG]}DY;{[WT]|[RM]}DY[VP]{[CT]|[{M(Oxidation (M))|F}G]}DY;[HT]DDP{I|L}G{[ET]|[MV]}DY 6.4474;5.7175;5.5152;5.2615;5.1369;5.0825;4.4848;4.407;4.2772;3.9001 -;-;-;+;-;-;-;-;-;- + 488 1 1.995 44343.4 1.0 5072 3683 8756 DOHH2_400M_050219_2,8757 DOHH2_400M_050219_2,8757,HTDDPLTWDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8758 50.306 101.0 472980.0 25 0 39904.0 + -1 SFRRTRCCFCL 11 69 781.860796540224 1561.707040147248 2 782.3577148318291 MULTI CID FTMS 0 0 0 8756 441927.8125 0.617719998011651 3 -0.1171798706054687 2 3 Carbamidomethyl (C) _SFRRTRC(Carbamidomethyl (C))C(Carbamidomethyl (C))FC(Carbamidomethyl (C))L_ REV__ENSG00000134278|ENST00000409402|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-2|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-3|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-4|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-5|SPIRE1 3.5964929083625545 0.858179447565866 2 [KT]QY{M(Oxidation (M))|F}ADQ[CS]C(Carbamidomethyl (C))V{I|L} 13 -1 + 65.681 0.0 0.0 4.2057 4.2057 52.397 0.0 0.0 0.0 45.49868220745476 6.2641933718740646 6.2641933718740646 0.0 0 0.0 0.0 0.3494850021680094 0.7742275032520141 [KT]QY{M(Oxidation (M))|F}ADQ[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}ADQ[CS]VC(Carbamidomethyl (C)){I|L};[KT][AG]Y{M(Oxidation (M))|F}ADQ[CS]VC(Carbamidomethyl (C)){I|L};[KT][AG]Y{M(Oxidation (M))|F}ADQ[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}ADQ[CS][CG]V{I|L};[KT]QY{M(Oxidation (M))|F}ADQ[CS]V[CG]{I|L};[KT]QY{M(Oxidation (M))|F}WQ[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}WQ[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}AD[AG][CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}AD[AG][CS]VC(Carbamidomethyl (C)){I|L} 4.2057;4.2057;3.6248;3.6248;3.6248;3.6248;3.5877;3.5877;3.401;3.401 -;-;-;-;-;-;-;-;-;- 1599 + 1 1.995 41567.5 1.0 5073 3683 8756 DOHH2_400M_050219_2,8758 DOHH2_400M_050219_2,8758,SFRRTRCCFCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8760 50.314 287.0 233170.0 25 0 14659.0 + 446 AEFKEAFQL 9 98 541.7795847184271 1081.5446165036542 2 541.7797119021416 MULTI CID FTMS 0 0 0 8759 234022.671875 0.4583851909897106 -3 0.1670112609863281 1 Unmodified _AEFKEAFQL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 79.59630418116434 0.0176145593575188 2 {[CP]|[EA]}{M(Oxidation (M))|F}KEA{M(Oxidation (M))|F}Q{I|L} 9 0 + 58.949 0.0 0.0 5.4505 5.4505 83.33 0.0 0.0 0.0 5.642492736872597 45.33854902898384 5.642492736872597 8.53286222516239 0 1.329689690656103 0.0 1.1549471895720984 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}KEA{M(Oxidation (M))|F}Q{I|L};[AG]{I|L}YAEA{M(Oxidation (M))|F}Q{I|L};[Q{I|L}]YAEA{M(Oxidation (M))|F}Q{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}K{M(Oxidation (M))|F}{[CP]|[EA]}Q{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}[VG]TA{M(Oxidation (M))|F}Q{I|L};[AG]{I|L}D{M(Oxidation (M))|F}TA{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}TA{M(Oxidation (M))|F}Q{I|L};[AG]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}EA{M(Oxidation (M))|F}Q{I|L};[Q{I|L}]D{M(Oxidation (M))|F}TA{M(Oxidation (M))|F}Q{I|L};[TA][PS]{M(Oxidation (M))|F}TA{M(Oxidation (M))|F}Q{I|L} 5.4505;4.6615;4.1308;4.0435;4.0424;3.942;3.5268;3.4845;3.4113;3.399 +;-;-;-;-;-;-;-;-;- + 1179 1 1.995 55719.9 1.0 5074 3684 8759 DOHH2_400M_050219_2,8760 DOHH2_400M_050219_2,8760,AEFKEAFQL True True AEFKEAFQL 50.313976 541.779711902142 6762422.5 8759.0 MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;;nc|ENSG00000092841|P60660-2|MYL6;;ENSG00000092841|ENST00000550697|MYL6;;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;;ENST00000548725.5_1_12:56552185-56553955:+|nuORF 6.888554573059082 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8761 50.328 800.0 79690.0 25 0 3259.0 -1 0 63 1174.8820080383691 3521.624194715308 3 1175.217944324017 MULTI CID FTMS 0 0 0 8759 46521.0703125 0.4398599910915509 1 -0.0493431091308593 2 2 NVQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 15 -1 77.194 0.0 0.0 2.192 0.0 0.0 1777.8648696194075 0.0 1777.8648696194075 0.0 71.70970510141954 0.0 0.0 0 0.0 0.0 0.4247425010840047 1.0629529932484498 NVQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.192 - 959 + 1 1.995 47577.6 0.3799999952316284 5075 3684 8759 DOHH2_400M_050219_2,8761 DOHH2_400M_050219_2,8761, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8762 50.342 800.0 214150.0 25 0 37792.0 + 31632 RRFFPYYVY 9 86 655.8377891075345 1309.661025281869 2 655.8383056521416 MULTI CID FTMS 0 0 0 8759 85101.6796875 0.0686721162315164 -6 0.2552452087402344 3 Unmodified _RRFFPYYVY_ ENSG00000008018|ENST00000262193|PSMB1 74.42276476219924 0.019389277360085 2 RR{M(Oxidation (M))|F}{M(Oxidation (M))|F}PYYVY 9 0 + 63.828 0.0 0.0 4.8736 4.8736 77.441 0.0 0.0 0.0 4.771212547196626 14.973024840566469 4.771212547196626 4.771212547196626 0 0.9247425010840048 0.0 0.0 2.1549471895720984 + + RR{M(Oxidation (M))|F}{M(Oxidation (M))|F}PYYVY;[R{M(Oxidation (M))|F}]R{M(Oxidation (M))|F}PYYVY;RR{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E]Y;[R{M(Oxidation (M))|F}]R{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E]Y 4.8736;4.5093;1.0913;0.72699 +;-;-;- + 319 1 1.995 126730.0 0.4000000059604645 5076 3684 8759 DOHH2_400M_050219_2,8762 DOHH2_400M_050219_2,8762,RRFFPYYVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8763 50.356 800.0 54230.0 25 0 14104.0 29380 QKVAFLLHKQW 11 67 699.4090031897522 1396.8034534463045 2 699.4100829958916 MULTI CID FTMS 0 0 0 8759 87224.0390625 0.2534553559242709 12 -0.5571746826171875 4 Unmodified _QKVAFLLHKQW_ ENSG00000120334|ENST00000682279|CENPL;ENST00000496683.5_1_1:173772617-173780437:-|nuORF;nc|ENSG00000120334|Q8N0S6-2|CENPL;nc|ENSG00000120334|Q8N0S6-3|CENPL 1.3295316138638542 0.8688751186870782 2 Q 1 10 6.9897 0.0 0.0 0.50041 0.0 0.0 942.5489806453262 323.17160974674067 1265.720590392067 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Q 0.50041 + + 13 + 1 1.995 43665.0 0.3899999856948852 5077 3684 8759 DOHH2_400M_050219_2,8763 DOHH2_400M_050219_2,8763,QKVAFLLHKQW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8765 50.364 226.0 279850.0 25 0 45283.0 + -1 RADGNFLLY 9 65 534.7777674585816 1067.540981983963 2 534.7797119021416 MULTI CID FTMS 0 0 0 8764 227087.640625 0.3895994207588573 -3 0.1214599609375 1 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))LVC(Carbamidomethyl (C))VLLY_ ENST00000474515.5_1_22:45593059-45598540:-|nuORF;nc|ENSG00000100364|Q6ICG6-3|KIAA0930;ENSG00000100364|ENST00000336156|KIAA0930;ENST00000498418.5_1_22:45593059-45595943:-|nuORF;ENST00000483374.1_1_22:45593059-45593908:-|nuORF;nc|ENSG00000100364|Q6ICG6-2|KIAA0930 24.20995872069341 0.5349487244130675 2 {M(Oxidation (M))|F}{I|L}{I|L}Y 4 -1 38.928 0.0 0.0 3.6465 0.0 0.0 513.2298613368495 0.0 513.2298613368495 0.0 27.33410649039925 0.0 0.0 0 1.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}{I|L}Y 3.6465 - 20 1 1.995 57286.5 1.0 5078 3685 8764 DOHH2_400M_050219_2,8765 DOHH2_400M_050219_2,8765,MLVCVLLY False False RADGNFLLY 50.363632 534.779711902142 7285758.0 8764.0 ENST00000474515.5_1_22:45593059-45598540:-|nuORF;;nc|ENSG00000100364|Q6ICG6-3|KIAA0930;;ENSG00000100364|ENST00000336156|KIAA0930;;ENST00000498418.5_1_22:45593059-45595943:-|nuORF;;ENST00000483374.1_1_22:45593059-45593908:-|nuORF;;nc|ENSG00000100364|Q6ICG6-2|KIAA0930 6.873309294382731 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8766 50.377 800.0 27581.0 25 0 2785.2 -1 0 48 587.9445595950235 1760.8118493852703 3 587.9445678591728 MULTI CID FTMS 0 0 0 8764 39794.68359375 0.4543386782761616 1 -0.06085205078125 2 2 Y 1 -1 12.764 0.0 0.0 0.7249 0.0 0.0 1579.7374760715968 0.0 1579.7374760715968 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.7249 - 35 + 1 1.995 24231.8 0.3899999856948852 5079 3685 8764 DOHH2_400M_050219_2,8766 DOHH2_400M_050219_2,8766, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8767 50.39 731.0 188430.0 25 0 24200.0 + -1 SVMSGLSFVVV 11 104 570.8010747954825 1139.5875966577648 2 570.8017455935478 MULTI CID FTMS 0 0 0 8764 131205.328125 0.4759907322527083 -3 0.1214599609375 3 Oxidation (M) _SVM(Oxidation (M))SGLSFVVV_ REV__ENSG00000109181|ENST00000265403|UGT2B10;REV__ENSG00000156096|ENST00000305107|UGT2B4;REV__ENSG00000171234|ENST00000305231|UGT2B7;REV__nc|ENSG00000109181|P36537-2|UGT2B10;REV__nc|ENSG00000156096|P06133-2|UGT2B4;REV__nc|ENSG00000156096|P06133-3|UGT2B4 13.90604991867851 0.7458848613461305 2 RR{[CP]|[EA]}{I|L}{I|L}SVV 9 -1 27.119 0.0 0.0 2.3798 0.0 0.0 0.0 112.96436677164743 112.96436677164743 5.653434601012609 0.0 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.9247425010840048 RR{[CP]|[EA]}{I|L}{I|L}SVV 2.3798 - 175 1 1.995 105948.5 1.0 5080 3685 8764 DOHH2_400M_050219_2,8767 DOHH2_400M_050219_2,8767,SVMSGLSFVVV False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8768 50.404 800.0 235530.0 25 0 27751.0 + 31634 RRFFPYYVY 9 84 437.56106430803 1309.66136352429 3 437.8952514529228 MULTI CID FTMS 0 0 0 8764 107707.046875 0.1744112865624147 -4 0.2163543701171875 4 Unmodified _RRFFPYYVY_ ENSG00000008018|ENST00000262193|PSMB1 42.09456458481378 0.0639583784996157 2 PYYVY 5 4 39.68 0.0 0.0 3.0298 0.0 0.0 606.338385359156 0.0 606.338385359156 0.0 27.897738675112205 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + PYYVY 3.0298 + + 73 1 1.995 150163.3 0.949999988079071 5081 3685 8764 DOHH2_400M_050219_2,8768 DOHH2_400M_050219_2,8768,RRFFPYYVY True True RRFFPYYVY 50.403973 437.5613 17145132.0 8764.0 ENSG00000008018|ENST00000262193|PSMB1 9.192883014678957 3.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8769 50.416 711.0 139080.0 25 0 7841.2 + 12309 GSDSVVLYLY 10 98 1115.5615891565578 1114.554312689958 1 1115.561938464642 MULTI CID FTMS 0 0 0 8764 79969.234375 0.0549553324732378 13 -0.5534210205078125 5 Unmodified _GSDSVVLYLY_ REV__ENSG00000187266|ENST00000222139|EPOR;REV__ENST00000592375.6_1_19:11488662-11489328:-|nuORF 54.773552608820026 0.052133998764723 2 [QT]DTV{I|L}Y{I|L}Y 9 -1 + 77.858 0.0 0.0 6.9856 6.9856 81.619 0.0 0.0 0.0 4.643331241078172 16.478174818886373 4.643331241078172 2.0156981316014964 0 1.066901560044258 0.0 2.0356668758921828 0.0 [QT]DTV{I|L}Y{I|L}Y;[QT]{I|L}DTYV{I|L}Y;[QT]{I|L}DS{I|L}Y{I|L}Y;[QT]DT{I|L}VY{I|L}Y;[QT]D{I|L}TYV{I|L}Y;[Y{I|L}]QTDTV{I|L}Y;[Y{I|L}]AGTDTV{I|L}Y;[QT]D{I|L}S{I|L}Y{I|L}Y;[QT]{I|L}DSY{I|L}{I|L}Y;[Q{I|L}]TDTYV{I|L}Y 6.9856;6.8048;6.7155;6.6658;6.6112;6.569;6.5279;6.522;6.4671;6.4477 -;-;-;-;-;-;-;-;-;- 8758 1 1.995 70310.8 1.0 5082 3685 8764 DOHH2_400M_050219_2,8769 DOHH2_400M_050219_2,8769,GSDSVVLYLY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8771 50.421 9.1 4598100.0 25 0 279560.0 -1 0 65 881.412242313419 1760.809931693638 2 881.4138061404228 MULTI CID FTMS 0 0 0 8770 5312746.5 0.3775812298563097 3 -0.1092758178710937 1 2 Y{M(Oxidation (M))|F}ANQQAE 8 -1 57.684 0.0 0.0 3.276 0.0 0.0 358.22181082853064 448.1589449518188 806.3807557803494 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.8494850021680094 Y{M(Oxidation (M))|F}ANQQAE 3.276 - 524 + 1 1.995 34463.2 1.0 5083 3686 8770 DOHH2_400M_050219_2,8771 DOHH2_400M_050219_2,8771, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8772 50.424 170.0 219420.0 25 0 30161.0 + 9393 FISKLRPKM 9 62 560.340494244839 1118.6664355564778 2 560.3403198122978 MULTI CID FTMS 0 0 0 8770 238786.390625 0.6515614285302553 3 -0.1092758178710937 2 Unmodified _FISKLRPKM_ REV__ENSG00000142185|ENST00000397928|TRPM2;REV__nc|ENSG00000142185|O94759-2|TRPM2;REV__nc|ENSG00000142185|O94759-3|TRPM2 4.75600775471527 0.7486543447549536 2 M{I|L}W 3 -1 13.188 0.0 0.0 1.1789 0.0 0.0 129.15411973792158 556.2788790338499 685.4329987717715 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L}W 1.1789 - 48 + 1 1.995 35450.6 1.0 5084 3686 8770 DOHH2_400M_050219_2,8772 DOHH2_400M_050219_2,8772,FISKLRPKM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8774 50.437 583.0 126040.0 25 0 10549.0 + + 6663 AEMEHLLERSWY 12 90 521.9132362743464 1562.717879423239 3 522.2480956912041 MULTI CID FTMS 0 0 0 8773 125074.578125 0.8184093025462299 1 -0.0523109436035156 1 Unmodified _EAYERYRYREE_ ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64900197-64901072:-|nuORF;ENST00000529207.5_1_11:64899759-64900720:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1 1.1097533296519684 0.8699120469545434 2 AEMEH{I|L}{I|L}EQ 9 -1 88.581 0.0 0.0 5.6684 0.0 0.0 0.0 479.2073153131469 479.2073153131469 63.431087926598266 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.5 0.0 AEMEH{I|L}{I|L}EQ 5.6684 - 672 + 1 1.995 63534.4 1.0 5085 3687 8773 DOHH2_400M_050219_2,8774 DOHH2_400M_050219_2,8774,EAYERYRYREE False False AEMEHLLERSWY 50.437234 521.9141 1049047.75 8773.0 ENSG00000162298|ENST00000377190|SYVN1;;ENST00000449943.5_1_11:64900197-64901072:-|nuORF;;ENST00000529207.5_1_11:64899759-64900720:-|nuORF;;nc|ENSG00000162298|Q86TM6-2|SYVN1;;nc|ENSG00000162298|Q86TM6-3|SYVN1 8.515652815500895 3.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8775 50.439 77.0 781200.0 25 0 57916.0 + -1 SFRRTRCCFCL 11 77 781.860796540224 1561.707040147248 2 781.8657714724541 MULTI CID FTMS 0 0 0 8773 604061.6875 1.0 0 0.0 2 3 Carbamidomethyl (C) _SFRRTRC(Carbamidomethyl (C))C(Carbamidomethyl (C))FC(Carbamidomethyl (C))L_ REV__ENSG00000134278|ENST00000409402|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-2|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-3|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-4|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-5|SPIRE1 3.5964929083625545 0.858179447565866 2 [KT]EY{M(Oxidation (M))|F}ANQ[CS]C(Carbamidomethyl (C))V{I|L} 13 -1 + 69.533 0.0 0.0 4.4523 4.4523 76.125 0.0 0.0 0.0 6.008430759637172 7.5578094971178515 6.008430759637172 5.0 0 0.5 0.0 0.0 1.610924374808178 [KT]EY{M(Oxidation (M))|F}ANQ[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[CS]VC(Carbamidomethyl (C)){I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQQNA{M(Oxidation (M))|F}YQ[{I|L}V];[KT]EY{M(Oxidation (M))|F}ANQ[CS][CG]V{I|L};[KT]EY{M(Oxidation (M))|F}AGGQ[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AN[AG][CS]C(Carbamidomethyl (C))V{I|L};[YQ]V[CS]QNA{M(Oxidation (M))|F}YQ[{I|L}V];[KT]EY{M(Oxidation (M))|F}AN[AG][CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AGGQ[CS]VC(Carbamidomethyl (C)){I|L} 4.4523;4.1322;4.0191;3.9684;3.8714;3.8714;3.8714;3.5715;3.5512;3.5512 -;-;-;-;-;-;-;-;-;- 1302 + 1 1.995 47711.9 1.0 5086 3687 8773 DOHH2_400M_050219_2,8775 DOHH2_400M_050219_2,8775,SFRRTRCCFCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8776 50.451 662.0 134120.0 25 0 10869.0 + 43941 YGKIAVMEL 9 102 512.2808165323241 1022.5470801314484 2 512.2809936404228 MULTI CID FTMS 0 0 0 8773 168351.65625 0.78704839521327 -1 0.0081405639648437 3 Unmodified _YGKIAVMEL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1 49.93300154707207 0.0405168250806675 2 [KG]Y{I|L}AVME{I|L} 9 2 + 66.362 0.0 0.0 6.4898 6.4898 84.764 0.0 0.0 0.0 4.628618393527404 56.02715782384018 4.628618393527404 6.020599913279625 0 1.174742501084005 0.0 0.0 0.0 [KG]Y{I|L}AVME{I|L};[KG]Y{I|L}G{I|L}ME{I|L};[KG]Y{I|L}AVEM{I|L};[YG]K{I|L}AVME{I|L};[KG]Y{I|L}AMVE{I|L};[KG]YA{I|L}VME{I|L};{[VA]|[{I|L}G]}YKAVME{I|L};[KG]Y{I|L}G{I|L}EM{I|L};[KG]Y{I|L}MG{I|L}E{I|L};[KG]Y{I|L}GM{I|L}E{I|L} 6.4898;5.9011;5.8774;5.7288;5.6815;5.6634;5.4222;5.2886;5.2649;5.2649 -;-;-;+;-;-;-;-;-;- + 1714 1 1.995 71072.2 1.0 5087 3687 8773 DOHH2_400M_050219_2,8776 DOHH2_400M_050219_2,8776,YGKIAVMEL True True YGKIAVMEL 50.450565 512.280993640423 1180930.25 8773.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;;nc|ENSG00000167986|Q16531-2|DDB1 2.841715176900228 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8777 50.463 715.0 53664.0 25 0 16629.0 + 30239 QWSRLRRRAGR 11 59 721.4220799897547 1440.829607046309 2 721.4218627810478 MULTI CID FTMS 0 0 0 8773 97052.5234375 0.5466566905353368 -2 0.0689926147460937 4 Unmodified _QWSRLRRRAGR_ REV__ENST00000343028.8_3_12:27167184-27167292:-|nuORF 0.3506318815782774 0.8734936314171269 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.995 40795.2 1.0 5088 3687 8773 DOHH2_400M_050219_2,8777 DOHH2_400M_050219_2,8777,QWSRLRRRAGR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8778 50.477 800.0 142580.0 25 0 10302.0 + 16673 KENPKEFFW 9 130 612.8056427939869 1223.5967326547736 2 612.8051635622978 MULTI CID FTMS 0 0 0 8773 88068.5390625 0.5348846423284904 -2 0.0689926147460937 5 Unmodified _KENPKEFFW_ ENSG00000133641|ENST00000356891|C12orf29;ENST00000547468.1_1_12:88436564-88442196:+|nuORF;ENST00000548511.5_1_12:88429578-88437530:+|nuORF;ENST00000550333.5_1_12:88429286-88442196:+|nuORF;ENST00000552121.5_1_12:88429328-88442196:+|nuORF;ENST00000552803.5_1_12:88429407-88437530:+|nuORF;ENST00000552847.5_1_12:88429328-88439561:+|nuORF;nc|ENSG00000133641|Q8N999-3|RLIG1 88.36371040165146 0.0154903161960565 2 ENPKE{M(Oxidation (M))|F}{M(Oxidation (M))|F}W 8 1 73.772 0.0 0.0 6.0291 0.0 0.0 128.09532363105626 0.0 128.09532363105626 0.0 41.66344976610702 0.0 0.0 0 2.6549471895720984 0.0 1.555462187404089 0.7614393726401688 + ENPKE{M(Oxidation (M))|F}{M(Oxidation (M))|F}W 6.0291 + + 3346 1 1.995 89753.1 0.4000000059604645 5089 3687 8773 DOHH2_400M_050219_2,8778 DOHH2_400M_050219_2,8778,KENPKEFFW True True KENPKEFFW 50.476813 612.805163562298 1220205.875 8773.0 ENSG00000133641|ENST00000356891|C12orf29;;ENST00000552121.5_1_12:88429328-88442196:+|nuORF;;ENST00000550333.5_1_12:88429286-88442196:+|nuORF;;ENST00000552847.5_1_12:88429328-88439561:+|nuORF;;ENST00000552803.5_1_12:88429407-88437530:+|nuORF;;ENST00000548511.5_1_12:88429578-88437530:+|nuORF;;ENST00000547468.1_1_12:88436564-88442196:+|nuORF;;nc|ENSG00000133641|Q8N999-3|RLIG1 9.091708819071451 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8780 50.485 337.0 98963.0 25 0 13421.0 + 43453 WTEMNTIVY 9 58 578.7699427569391 1155.5253325806782 2 578.7713500857353 MULTI CID FTMS 0 0 0 8779 158162.1875 0.6390720633083118 -2 0.0604515075683593 1 Unmodified _WTEMNTIVY_ ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8 16.942295170755138 0.3780752226737986 2 VY 2 7 20.969 0.0 0.0 1.8147 0.0 0.0 875.3829813617314 0.0 875.3829813617314 0.0 15.026975159433531 0.0 0.0 0 0.0 0.0 0.0 0.0 + VY 1.8147 + + 7 + 1 1.995 34070.7 1.0 5090 3688 8779 DOHH2_400M_050219_2,8780 DOHH2_400M_050219_2,8780,WTEMNTIVY False True WTEMNTIVY 50.485469 578.771350085735 1900253.5 8779.0 nc|ENSG00000100888|Q9HCK8-2|CHD8;;ENSG00000100888|ENST00000646647|CHD8 3.601192712783813 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8781 50.489 185.0 280580.0 25 0 22430.0 + 9646 FLNQRSIML 9 71 561.3100554518397 1120.6055579704794 2 561.3099853396416 MULTI CID FTMS 0 0 0 8779 285191.46875 1.0 0 0.0 2 Unmodified _FLNQRSIML_ ENST00000308973.8_1_4:38777424-38777762:-|nuORF;ENST00000506111.1_1_4:38777424-38777628:-|nuORF 40.23920728925047 0.0741434193262949 2 {M(Oxidation (M))|F}{I|L}N[KG]W{I|L}M{I|L} 9 3 + 36.85 0.0 0.0 3.2884 3.2884 81.298 0.0 0.0 0.0 0.6644716450613757 5.435684192258002 0.6644716450613757 21.497972112521925 0 1.6549471895720984 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}N[KG]W{I|L}M{I|L};[YV][W{I|L}][PS]{I|L}M{I|L};[YV]{I|L}[PS][W{I|L}]M{I|L} 3.2884;1.37;0.96463 -;-;- 107 + 1 1.995 45632.9 1.0 5091 3688 8779 DOHH2_400M_050219_2,8781 DOHH2_400M_050219_2,8781,FLNQRSIML True True FLNQRSIML 50.489054 561.309985339642 1625420.0 8779.0 ENST00000506111.1_1_4:38777424-38777628:-|nuORF;;ENST00000308973.8_1_4:38777424-38777762:-|nuORF 4.510006109873454 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8782 50.497 423.0 200390.0 25 0 20943.0 + 30081 QVDPLSALKY 10 103 567.3134660948167 1132.612379256433 2 567.3139526247978 MULTI CID FTMS 0 0 0 8779 157864.578125 0.079188870902834 -4 0.1706466674804687 3 Unmodified _QVDPLSALKY_ ENSG00000128585|ENST00000352689|MKLN1;ENST00000494785.5_1_7:131012658-131163543:+|nuORF;ENST00000497746.1_1_7:131149041-131155790:+|nuORF;ENST00000498778.5_1_7:131151082-131172419:+|nuORF;nc|ENSG00000128585|Q9UL63-2|MKLN1 67.83816525789305 0.0190062514522628 2 {[QV]|[N{I|L}]|[RA]|[KV]}DP{I|L}SA{I|L}KY 10 0 + 73.925 0.0 0.0 6.5269 6.5269 93.476 0.0 0.0 0.0 45.8946443675005 13.521825181113629 13.521825181113629 24.944641038550152 0 0.5994850021680094 2.0 0.0 0.5356668758921829 + + {[QV]|[N{I|L}]|[RA]|[KV]}DP{I|L}SA{I|L}KY;{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}AN[TP]KY;{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}ARA{[NV]|[RG]}Y;{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}AN{I|L}{[NV]|[RG]}Y;{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}AN[HV]G[VP] 6.5269;4.3245;3.2142;2.793;1.5626 +;-;-;-;- + 565 + 1 1.995 69637.9 1.0 5092 3688 8779 DOHH2_400M_050219_2,8782 DOHH2_400M_050219_2,8782,QVDPLSALKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8783 50.505 492.0 153820.0 25 0 6983.3 -1 0 72 914.9396265804892 1827.8647002277785 2 916.4377929568292 MULTI CID FTMS 0 0 0 8779 139654.171875 0.3990765557921613 -11 0.4725303649902344 4 2 {[QV]|[N{I|L}]|[RA]|[KV]}EY{M(Oxidation (M))|F}WQQAEEVC(Carbamidomethyl (C)){I|L} 14 -1 + 103.94 0.0 0.0 5.6863 5.6863 78.609 0.0 0.0 0.0 79.7564045197371 6.505149978319906 6.505149978319906 3.0102999566398125 0 0.0 1.5228787452803376 0.3807196863200844 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}EY{M(Oxidation (M))|F}WQQAEEVC(Carbamidomethyl (C)){I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EY{M(Oxidation (M))|F}WQQAEEC(Carbamidomethyl (C))V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EY{M(Oxidation (M))|F}ADQQAED{[CA]|SS}V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EY{M(Oxidation (M))|F}WQQAEEV[CG]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EY{M(Oxidation (M))|F}W[AG]QAEEVC(Carbamidomethyl (C)){I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EY{M(Oxidation (M))|F}WQ[AG]AEEVC(Carbamidomethyl (C)){I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EY{M(Oxidation (M))|F}WQ[AG]AEEC(Carbamidomethyl (C))V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EY{M(Oxidation (M))|F}WQQAEE[CG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EY{M(Oxidation (M))|F}W[AG]QAEEC(Carbamidomethyl (C))V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EY{M(Oxidation (M))|F}WQQAED{[CA]|SS}V{I|L} 5.6863;5.5216;5.2972;5.1912;5.1912;5.1912;5.0265;5.0265;5.0265;4.9301 -;-;-;-;-;-;-;-;-;- 3522 + 1 1.995 56842.0 1.0 5093 3688 8779 DOHH2_400M_050219_2,8783 DOHH2_400M_050219_2,8783, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8784 50.519 800.0 91677.0 25 0 11661.0 + + -1 TVMENFVAFVDK 12 83 708.3469581298077 1414.6793633264151 2 708.3486205935478 MULTI CID FTMS 0 0 0 8779 93385.6484375 0.8707186988027599 -1 0.0523109436035156 5 Oxidation (M) _SIM(Oxidation (M))MMNVKFLW_ P02769 17.11289562659939 0.6791789249425932 2 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}EN{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK 12 -1 + 106.2 0.0 0.0 7.5069 7.5069 90.188 0.0 0.0 0.0 81.67815894594433 17.92191046148514 17.92191046148514 9.098233696509112 0 0.805462187404089 2.0 0.25 0.4320395983658752 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}EN{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EGG{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}E[KC]EA{M(Oxidation (M))|F}VDK;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EN{M(Oxidation (M))|F}VA[WR]{M(Oxidation (M))|F};[YT][DP]N{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EGG{M(Oxidation (M))|F}VA[WR]{M(Oxidation (M))|F};[YT]YY{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK;[YT][DP]GG{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}E[KC]EA[WR]{M(Oxidation (M))|F};[YT]{[YC]|[HE]}{I|L}[YT]{M(Oxidation (M))|F}VDK 7.5069;6.8638;6.1815;5.0192;4.4112;4.3739;3.9438;3.768;3.6938;2.8311 -;-;-;-;-;-;-;-;-;- 348 + 1 1.995 56864.4 0.4099999964237213 5094 3688 8779 DOHH2_400M_050219_2,8784 DOHH2_400M_050219_2,8784,SIMMMNVKFLW False False TVMENFVAFVDK 50.519141 708.348620593548 664934.75 8779.0 P02769 10.73947270711263 2.0 False 12.0 True unknown PXD020620_cell_line DOHH2_400M_050219_2 8785 50.526 359.0 356550.0 25 0 18630.0 -1 0 87 887.4128753554018 1772.8111977776034 2 887.9133178591728 MULTI CID FTMS 0 0 0 8779 158911.828125 0.319427682321005 -2 0.0604515075683593 6 2 [KT]EY{M(Oxidation (M))|F}ANPAAGNA{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 16 -1 + 88.318 0.0 0.0 4.9818 4.9818 74.487 0.0 0.0 0.0 1.938652556024678 1.938652556024678 1.938652556024678 1.938652556024678 0 0.3494850021680094 0.0 0.0 2.4291746928241125 [KT]EY{M(Oxidation (M))|F}ANPAAGNA{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[YQ][WD]AQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ][WD]AQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}ANGAAPNA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}ANGAAPNA{M(Oxidation (M))|F}YKV{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}YKV{I|L};[KT]EY{M(Oxidation (M))|F}AGGPAAGNA{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANPAAGNA{M(Oxidation (M))|F}[CG]{I|L};[YQ][WE]GQQNA{M(Oxidation (M))|F}YKV{I|L} 4.9818;4.8725;4.8725;4.8552;4.8552;4.8373;4.8373;4.4734;4.4734;4.4335 -;-;-;-;-;-;-;-;-;- 3287 + 1 1.995 95145.6 1.0 5095 3688 8779 DOHH2_400M_050219_2,8785 DOHH2_400M_050219_2,8785, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8787 50.535 287.0 185890.0 25 0 25494.0 + 33898 SLFPNSPKW 9 80 538.2822219403982 1074.5498909475964 2 538.2823364138603 MULTI CID FTMS 0 0 0 8786 164807.046875 0.2787433312653283 8 -0.36468505859375 1 Unmodified _SLFPNSPKW_ ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF 14.95716135407024 0.4318104563536712 2 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNS[KP]W 9 0 + 59.142 0.0 0.0 5.5039 5.5039 85.398 0.0 0.0 0.0 45.16257482205354 6.478174818886373 6.478174818886373 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.0 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNS[KP]W;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGS[KP]W;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]S[KP]W;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[DG]R[NG]{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[DP]R[NG]{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[KG][QP]{[DS]|[MA]|[CV]|TT};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[KP][QP]{[DS]|[MA]|[CV]|TT} 5.5039;4.6469;4.3668;3.148;2.8679;2.458;2.1778 +;-;-;-;-;-;- + 243 + 1 1.995 45177.6 1.0 5096 3689 8786 DOHH2_400M_050219_2,8787 DOHH2_400M_050219_2,8787,SLFPNSPKW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8788 50.549 800.0 71862.0 25 0 3646.1 -1 0 86 845.8935177255889 1689.7724825179778 2 845.8952514529228 MULTI CID FTMS 0 0 0 8786 77830.4609375 0.1829372285221025 6 -0.2829666137695312 2 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQ{[QG]|[NA]}{M(Oxidation (M))|F}Y 11 -1 66.559 0.0 0.0 3.9389 0.0 0.0 0.0 355.2010463209653 355.2010463209653 17.823383885569505 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.3807196863200844 1.9291746928241125 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQ{[QG]|[NA]}{M(Oxidation (M))|F}Y 3.9389 - 1124 1 1.995 46286.2 0.4799999892711639 5097 3689 8786 DOHH2_400M_050219_2,8788 DOHH2_400M_050219_2,8788, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8789 50.555 331.0 230560.0 25 0 21121.0 + 561 AEIIKEDLW 9 86 558.8003652461379 1115.5861775590756 2 558.7994262576103 MULTI CID FTMS 0 0 0 8786 158839.609375 0.306886425938188 -3 0.1092758178710937 3 Unmodified _AEIIKEDLW_ ENSG00000189241|ENST00000368608|TSPYL1 34.93206674587334 0.1032771302489716 2 {[CP]|[EA]}{I|L}[TA]{I|L}[KQ]GW 10 5 + 44.398 0.0 0.0 3.9798 3.9798 68.585 0.0 0.0 0.0 0.0637620950818274 10.48455006504028 0.0637620950818274 0.4845500650402812 0 1.3494850021680094 0.0 0.4247425010840047 0.0 {[CP]|[EA]}{I|L}[TA]{I|L}[KQ]GW;{[CP]|[EA]}{I|L}[TA]{I|L}[KQ]EN;{[QN]|[E{I|L}]|[KN]}A{I|L}M[PS]{I|L}GW;{[CP]|[EA]}{I|L}[TA]{I|L}{I|L}{[CP]|[EA]}W;{[CP]|[EA]}{I|L}[TA]{I|L}{[CP]|[EA]}{I|L}W;{[CP]|[EA]}{I|L}{I|L}M[PS]{I|L}G[VS];{[CP]|[EA]}{I|L}{I|L}[TA][KQ]GW;{[QN]|[E{I|L}]|[KN]}A{I|L}M[PS]G{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D{I|L}{I|L}[KQ]EN;{[CP]|[EA]}{I|L}{I|L}WW{I|L}W 3.9798;3.9363;3.8848;3.7099;3.7099;3.6693;3.6195;3.6149;3.5955;3.5944 -;-;-;-;-;-;-;-;-;- 1208 1 1.995 62480.6 1.0 5098 3689 8786 DOHH2_400M_050219_2,8789 DOHH2_400M_050219_2,8789,AEIIKEDLW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8790 50.565 613.0 59472.0 25 0 6015.8 + 7013 EEKPIEIQW 9 71 586.3032610460064 1170.5919691588126 2 586.3032104372978 MULTI CID FTMS 0 0 0 8786 114430.6953125 0.2214772826520596 6 -0.2829666137695312 4 Unmodified _EEKPIEIQW_ ENSG00000113460|ENST00000336767|BRIX1 20.453626601364224 0.2830276176381075 2 [{I|L}P]E{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L} 7 5 28.394 0.0 0.0 2.4256 0.0 0.0 0.0 329.12648999305014 329.12648999305014 7.820838169992758 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.9247425010840048 0.0 [{I|L}P]E{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L} 2.4256 - 105 1 1.995 32731.1 1.0 5099 3689 8786 DOHH2_400M_050219_2,8790 DOHH2_400M_050219_2,8790,EEKPIEIQW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8791 50.579 800.0 115800.0 25 0 13032.0 -1 YIIMQSCWAF 10 80 659.7994565838202 1317.5843602344405 2 659.7994872927666 MULTI CID FTMS 0 0 0 8786 100146.2265625 0.8939937414174637 -1 0.0488243103027343 5 Carbamidomethyl (C) _YIIMQSC(Carbamidomethyl (C))WAF_ ENSG00000122025|ENST00000241453|FLT3;ENST00000380987.2_1_13:28578191-28599431:-|nuORF;nc|ENSG00000122025|P36888-2|FLT3 22.736283301280096 0.4578556481593033 2 Y{I|L}{M(Oxidation (M))|F}D 4 -1 57.211 0.0 0.0 4.3421 0.0 0.0 0.0 776.3192674297118 776.3192674297118 43.71645960868548 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3494850021680094 0.0 Y{I|L}{M(Oxidation (M))|F}D 4.3421 - 105 + 1 1.995 74679.4 0.4300000071525574 5100 3689 8786 DOHH2_400M_050219_2,8791 DOHH2_400M_050219_2,8791,YIIMQSCWAF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8792 50.593 800.0 148340.0 25 0 13711.0 -1 0 71 930.4490076446232 1858.8834623560465 2 930.9516479372978 MULTI CID FTMS 0 0 0 8786 84033.78125 0.927110822348214 -3 0.1092758178710937 6 2 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[MD]YQQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 102.98 0.0 0.0 5.5398 5.5398 76.694 0.0 0.0 0.0 2.000941186630726 2.000941186630726 2.000941186630726 2.000941186630726 0 1.6866654986684733 1.5228787452803376 0.0 1.4049471895720984 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[MD]YQQNA{M(Oxidation (M))|F}YQV{I|L};[KT]EY{M(Oxidation (M))|F}ANQQAED{[CT]|[{M(Oxidation (M))|F}G]}V{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]AED{[CT]|[{M(Oxidation (M))|F}G]}V{I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]QAED{[CT]|[{M(Oxidation (M))|F}G]}V{I|L};[KT]EY{M(Oxidation (M))|F}AGGQQAED{[CT]|[{M(Oxidation (M))|F}G]}V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQA[VG][KC]C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQ[WE]{[CT]|[{M(Oxidation (M))|F}G]}V{I|L} 5.5398;5.4321;4.9472;4.9472;4.9472;4.8352;4.0196 -;-;-;-;-;-;- 1372 1 1.995 81677.9 0.3899999856948852 5101 3689 8786 DOHH2_400M_050219_2,8792 DOHH2_400M_050219_2,8792, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8793 50.599 315.0 235570.0 25 0 14445.0 + 7739 ELDVRITAL 9 98 515.2997150417236 1028.5848771502472 2 515.3001586794853 MULTI CID FTMS 0 0 0 8786 191646.265625 0.8970248685420041 -1 0.0488243103027343 7 Unmodified _ELDVRITAL_ ENSG00000047410|ENST00000367478|TPR 24.020572477871973 0.2255576514309169 2 {[QN]|[E{I|L}]|[KN]}DV 4 5 37.945 0.0 0.0 3.6891 0.0 0.0 0.0 569.3430310929134 569.3430310929134 22.372118693881543 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {[QN]|[E{I|L}]|[KN]}DV 3.6891 + + 204 + 1 1.995 60909.0 1.0 5102 3689 8786 DOHH2_400M_050219_2,8793 DOHH2_400M_050219_2,8793,ELDVRITAL False True ELDVRITAL 50.598803 515.300158679485 1095279.375 8786.0 ENSG00000047410|ENST00000367478|TPR 5.34865665435791 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8795 50.604 28.0 1569100.0 25 0 127010.0 + 13796 HTDDPLTWDY 10 69 631.7697035934898 1261.5248542537795 2 631.7697631716728 MULTI CID FTMS 0 0 0 8794 1615528.625 0.3826157963643736 4 -0.1622123718261718 1 Unmodified _HTDDPLTWDY_ ENSG00000108651|ENST00000261708|UTP6;ENST00000583408.5_1_17:30207568-30228646:-|nuORF 62.57269311338072 0.0298375429882549 2 [HT]DDP{I|L}TWDY 10 0 + 68.141 0.0 0.0 5.4015 5.4015 77.128 0.0 0.0 0.0 2.2632617094281926 56.81540340012745 2.2632617094281926 2.998037644757048 0 0.805462187404089 0.0 1.274227503252014 0.0 + + [HT]DDP{I|L}TWDY;[WD]TY{I|L}TWDY;{[WT]|[RM]}DY{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RTWDY;{[WT]|[RM]}DY{I|L}TEGDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TEGDY;{[YD]|[{M(Oxidation (M))|F}M]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RTEGDY;{[{M(Oxidation (M))|F}C]|[YS]}[WE]{I|L}TWDY;[HT]DDP[VP]{[CT]|[{M(Oxidation (M))|F}G]}DY 5.4015;5.1638;4.9252;4.7451;4.5065;4.4127;4.2325;3.9939;3.9161;3.2943 +;-;-;-;-;-;-;-;-;- + 428 1 1.995 40644.4 1.0 5103 3690 8794 DOHH2_400M_050219_2,8795 DOHH2_400M_050219_2,8795,HTDDPLTWDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8796 50.605 40.0 1613700.0 25 0 293570.0 + 31633 RRFFPYYVY 9 60 655.8377891075345 1309.661025281869 2 655.8376953005791 MULTI CID FTMS 0 0 0 8794 1239246.5 1.0 0 0.0 2 Unmodified _RRFFPYYVY_ ENSG00000008018|ENST00000262193|PSMB1 23.1484247019978 0.2366544122328345 2 YVY 3 6 30.93 0.0 0.0 2.3617 0.0 0.0 866.4546628792419 0.0 866.4546628792419 0.0 21.264100213633768 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + YVY 2.3617 + + 33 1 1.995 50541.3 1.0 5104 3690 8794 DOHH2_400M_050219_2,8796 DOHH2_400M_050219_2,8796,RRFFPYYVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8797 50.614 533.0 161430.0 25 0 10324.0 + 447 AEFKEAFQL 9 105 541.7795847184271 1081.5446165036542 2 541.7792846560478 MULTI CID FTMS 0 0 0 8794 154054.0625 0.3017489728496132 3 -0.1269989013671875 3 Unmodified _AEFKEAFQL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000546630.1_1_12:56552185-56553570:+|nuORF;ENST00000547703.5_1_12:56552185-56553570:+|nuORF;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENST00000549017.5_1_12:56552185-56553840:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 79.59630418116434 0.0176145593575188 2 {[CP]|[EA]}{M(Oxidation (M))|F}KEA{M(Oxidation (M))|F}Q{I|L} 9 0 + 57.532 0.0 0.0 5.3195 5.3195 77.141 0.0 0.0 0.0 5.642492736872597 38.99263946979535 5.642492736872597 3.0102999566398125 0 1.3569758080123702 0.0 1.110924374808178 0.0 + + {[CP]|[EA]}{M(Oxidation (M))|F}KEA{M(Oxidation (M))|F}Q{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}RTA{M(Oxidation (M))|F}Q{I|L};[AG]{I|L}YAEA{M(Oxidation (M))|F}Q{I|L};[Q{I|L}]YAEA{M(Oxidation (M))|F}Q{I|L};[{M(Oxidation (M))|F}E]AKEA{M(Oxidation (M))|F}Q{I|L};{[CP]|[EA]}K{M(Oxidation (M))|F}EA{M(Oxidation (M))|F}Q{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}[VG]TA{M(Oxidation (M))|F}Q{I|L};[{M(Oxidation (M))|F}E]KAEA{M(Oxidation (M))|F}Q{I|L};[AG]{I|L}D{M(Oxidation (M))|F}TA{M(Oxidation (M))|F}Q{I|L};[AG]{I|L}S{M(Oxidation (M))|F}EA{M(Oxidation (M))|F}Q{I|L} 5.3195;5.0411;4.7505;4.3712;4.2422;4.2073;4.1897;4.1502;4.031;4.031 +;-;-;-;-;-;-;-;-;- + 1603 1 1.995 70756.0 1.0 5105 3690 8794 DOHH2_400M_050219_2,8797 DOHH2_400M_050219_2,8797,AEFKEAFQL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8798 50.628 800.0 164060.0 25 0 18453.0 + -1 WQPDAACL 8 108 480.7152383977049 959.41592386221 2 480.7152282595634 MULTI CID FTMS 0 0 0 8794 120891.453125 1.0 0 0.0 4 Carbamidomethyl (C) _WQPDAAC(Carbamidomethyl (C))L_ REV__ENSG00000122861|ENST00000372764|PLAU;REV__nc|ENSG00000122861|P00749-2|PLAU 2.889219685676258 0.8067950007271085 2 {I|L} 1 -1 11.594 0.0 0.0 1.2084 0.0 0.0 828.3211190299818 0.0 828.3211190299818 0.0 0.756338376653245 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2084 + + 30 + 1 1.995 104915.3 0.4600000083446502 5106 3690 8794 DOHH2_400M_050219_2,8798 DOHH2_400M_050219_2,8798,WQPDAACL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8799 50.636 470.0 201840.0 25 0 18165.0 + 6917 EEFIGKIGI 9 106 503.2846115132498 1004.5546700932996 2 503.2851440310478 MULTI CID FTMS 0 0 0 8794 120605.2890625 0.6100876859836557 -1 0.0731735229492187 5 Unmodified _EEFIGKIGI_ ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071|PRDM15 57.47134341890925 0.0274820932774257 2 EE{M(Oxidation (M))|F}{I|L}GK{I|L}G{I|L} 9 0 + 51.983 0.0 0.0 5.1747 5.1747 88.803 0.0 0.0 0.0 26.57698754585809 8.873949984654246 8.873949984654246 30.01525333825434 0 0.8494850021680094 1.3979400086720375 0.0 0.0 + + EE{M(Oxidation (M))|F}{I|L}GK{I|L}G{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}{I|L}{M(Oxidation (M))|F}[HC] 5.1747;2.1868 +;- + 220 + 1 1.995 77731.4 1.0 5107 3690 8794 DOHH2_400M_050219_2,8799 DOHH2_400M_050219_2,8799,EEFIGKIGI True True EEFIGKIGI 50.636343 503.285144031048 993561.5625 8794.0 nc|ENSG00000141956|P57071-3|PRDM15;;nc|ENSG00000141956|P57071-2|PRDM15;;nc|ENSG00000141956|P57071|PRDM15;;ENSG00000141956|ENST00000398548|PRDM15 4.822631359100342 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8800 50.647 588.0 85267.0 25 0 19174.0 + 16066 ITNKYQLVF 9 76 563.3187552422053 1124.6229575512104 2 563.3189575076103 MULTI CID FTMS 0 0 0 8794 110691.4921875 0.9603583807835476 -2 0.1219978332519531 6 Unmodified _ITNKYQLVF_ ENSG00000085721|ENST00000198767|RRN3;ENST00000427965.6_1_16:29086353-29124388:+|nuORF;ENST00000551766.5_1_16:22437686-22447115:-|nuORF;ENST00000563573.5_1_16:22361166-22444153:-|nuORF;ENST00000569045.1_1_16:22376319-22447115:-|nuORF;nc|ENSG00000085721|Q9NYV6-3|RRN3;nc|ENSG00000085721|Q9NYV6-4|RRN3 30.63653989081413 0.1413794767160703 2 [YQ]{I|L}KNT{I|L}V{M(Oxidation (M))|F} 9 5 + 45.526 0.0 0.0 4.0481 4.0481 77.541 0.0 0.0 0.0 5.642492736872597 24.35464087144375 5.642492736872597 8.010299956639805 0 0.8182503180159344 0.0 0.3252574989159953 0.4247425010840047 [YQ]{I|L}KNT{I|L}V{M(Oxidation (M))|F};[YQ]{I|L}KNTV{I|L}{M(Oxidation (M))|F};[YQ]{I|L}KGGT{I|L}V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[{I|L}T][YQ]{I|L}V{M(Oxidation (M))|F};[YQ]{I|L}KGGTV{I|L}{M(Oxidation (M))|F};[YQ]{I|L}KNVT{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[{I|L}T][YQ]V{I|L}{M(Oxidation (M))|F};[YQ]{I|L}KGGVT{I|L}{M(Oxidation (M))|F} 4.0481;3.3358;3.2293;2.7141;2.517;2.2447;2.0018;1.4259 -;-;-;-;-;-;-;- 134 1 1.995 43356.2 1.0 5108 3690 8794 DOHH2_400M_050219_2,8800 DOHH2_400M_050219_2,8800,ITNKYQLVF False True ITNKYQLVF 50.646645 563.31895750761 695856.9375 8794.0 ENST00000563573.5_1_16:22361166-22444153:-|nuORF;;ENST00000569045.1_1_16:22376319-22447115:-|nuORF;;nc|ENSG00000085721|Q9NYV6-4|RRN3;;ENST00000427965.6_1_16:29086353-29124388:+|nuORF;;ENSG00000085721|ENST00000198767|RRN3;;ENST00000551766.5_1_16:22437686-22447115:-|nuORF;;nc|ENSG00000085721|Q9NYV6-3|RRN3 2.9198093811670938 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8801 50.66 800.0 104060.0 25 0 7339.7 -1 0 78 921.4439262326604 1840.8732995321204 2 921.9467040896416 MULTI CID FTMS 0 0 0 8794 92843.7109375 0.9767526363866648 -2 0.1219978332519531 7 2 [KT]EY{M(Oxidation (M))|F}ANQQAE 11 -1 68.787 0.0 0.0 3.7367 0.0 0.0 0.0 528.2202242486936 528.2202242486936 42.602682818976334 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 [KT]EY{M(Oxidation (M))|F}ANQQAE 3.7367 - 890 + 1 1.995 61245.7 0.3899999856948852 5109 3690 8794 DOHH2_400M_050219_2,8801 DOHH2_400M_050219_2,8801, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8802 50.669 474.0 91161.0 25 0 6476.2 -1 0 61 1037.0121712593734 2072.009789585547 2 1037.514208972454 MULTI CID FTMS 0 0 0 8794 119370.9765625 1.0 0 0.0 8 2 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NMR 6 -1 44.13 0.0 0.0 2.1298 0.0 0.0 0.0 1327.5811146190033 1327.5811146190033 9.444152858125108 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 1.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NMR 2.1298 - 422 1 1.995 36874.1 1.0 5110 3690 8794 DOHH2_400M_050219_2,8802 DOHH2_400M_050219_2,8802, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8804 50.675 100.0 455660.0 25 0 57087.0 + 31635 RRFFPYYVY 9 48 437.56106430803 1309.66136352429 3 437.5609008669853 MULTI CID FTMS 0 0 0 8803 486186.09375 0.6091082024067948 2 -0.0568733215332031 1 Unmodified _RRFFPYYVY_ ENSG00000008018|ENST00000262193|PSMB1 16.942295170755138 0.3780752226737986 2 YVY 3 6 27.435 0.0 0.0 2.0948 0.0 0.0 866.4549550556848 0.0 866.4549550556848 0.0 20.445312593723983 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + YVY 2.0948 + + 10 1 1.995 41451.0 1.0 5111 3691 8803 DOHH2_400M_050219_2,8804 DOHH2_400M_050219_2,8804,RRFFPYYVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8805 50.683 449.0 177930.0 25 0 25312.0 -1 MLVCVLLY 8 92 534.7777674585816 1067.540981983963 2 534.7776977419853 MULTI CID FTMS 0 0 0 8803 152413.15625 0.2614852892372342 3 -0.0920867919921875 2 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))LVC(Carbamidomethyl (C))VLLY_ nc|ENSG00000254167|P0DTE2|IGHV8-51-1 17.086550045450526 0.6584923310065985 2 {M(Oxidation (M))|F}{I|L}{I|L}Y 4 -1 40.433 0.0 0.0 3.7875 0.0 0.0 513.2296384020786 0.0 513.2296384020786 0.0 29.013067000015216 0.0 0.0 0 1.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}{I|L}Y 3.7875 - 135 1 1.995 64533.1 1.0 5112 3691 8803 DOHH2_400M_050219_2,8805 DOHH2_400M_050219_2,8805,MLVCVLLY False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 8806 50.686 153.0 369480.0 25 0 39072.0 + 576 AEINNIIKI 9 73 514.3109951752583 1026.6074374173163 2 514.3109008669853 MULTI CID FTMS 0 0 0 8803 264432.125 0.1209547379371283 -4 0.2444343566894531 3 Unmodified _AEINNIIKI_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;ENST00000491510.1_1_3:25668659-25671642:-|nuORF;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 47.74868867922204 0.0453060283459952 2 {[CP]|[EA]}{I|L}NN{I|L}{I|L}K{I|L} 9 0 + 46.176 0.0 0.0 4.4979 4.4979 75.065 0.0 0.0 0.0 7.147642715192504 3.802112417116064 3.802112417116064 3.802112417116064 0 1.1677353201839438 0.0 0.0 0.2614393726401688 + + {[CP]|[EA]}{I|L}NN{I|L}{I|L}K{I|L};{[CP]|[EA]}{I|L}NN{I|L}{I|L}{I|L}K;{[CP]|[EA]}{I|L}GGN{I|L}{I|L}K{I|L};{[CP]|[EA]}{I|L}GGN{I|L}{I|L}{I|L}K 4.4979;4.1276;3.601;3.2306 +;-;-;- + 177 + 1 1.995 47496.1 1.0 5113 3691 8803 DOHH2_400M_050219_2,8806 DOHH2_400M_050219_2,8806,AEINNIIKI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8808 50.691 45.0 804530.0 25 0 51218.0 -1 0 53 881.412242313419 1760.809931693638 2 881.9136230349541 MULTI CID FTMS 0 0 0 8807 1012229.125 0.0751380590561322 9 -0.2698822021484375 1 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQNA 11 -1 52.427 0.0 0.0 2.9774 0.0 0.0 0.0 665.3328864416336 665.3328864416336 33.218973368385846 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQNA 2.9774 - 1438 1 1.995 29943.6 1.0 5114 3692 8807 DOHH2_400M_050219_2,8808 DOHH2_400M_050219_2,8808, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8809 50.703 683.0 174230.0 25 0 31511.0 -1 0 92 1027.005427472592 2051.9963020119844 2 1027.507739245892 MULTI CID FTMS 0 0 0 8807 94335.4453125 0.8402404123023807 -3 0.1603317260742187 2 2 [QP][QT]PPPP 8 -1 32.625 0.0 0.0 1.5899 0.0 0.0 0.0 1206.5451650172874 1206.5451650172874 12.003639918940507 0.0 0.0 0.0 0 0.5 0.0 0.0 0.6989700043360187 [QP][QT]PPPP 1.5899 - 2989 1 1.995 81682.3 1.0 5115 3692 8807 DOHH2_400M_050219_2,8809 DOHH2_400M_050219_2,8809, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8810 50.712 525.0 66680.0 25 0 6320.9 -1 0 48 825.3965852533815 2473.1679263603446 3 825.7300292849541 MULTI CID FTMS 0 0 0 8807 76765.8671875 1.0 0 0.0 3 2 [EP]N{I|L}P 5 -1 37.945 0.0 0.0 1.5343 0.0 0.0 0.0 1919.870904225832 1919.870904225832 27.487737688117235 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.3252574989159953 [EP]N{I|L}P 1.5343 - 59 1 1.995 34410.3 1.0 5116 3692 8807 DOHH2_400M_050219_2,8810 DOHH2_400M_050219_2,8810, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8811 50.726 800.0 49772.0 25 0 12605.0 -1 0 55 1029.5014165233947 3085.482420170384 3 1030.168017566204 MULTI CID FTMS 0 0 0 8807 71072.046875 0.7709612746542475 -2 0.087158203125 4 2 {I|L}V 2 -1 7.9588 0.0 0.0 0.25794 0.0 0.0 2255.058910504172 615.2443331354124 2870.3032436395847 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 0.25794 - 112 + 1 1.995 34286.1 0.3400000035762787 5117 3692 8807 DOHH2_400M_050219_2,8811 DOHH2_400M_050219_2,8811, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8813 50.742 800.0 52097.0 25 0 14882.0 43384 WQKLIVWKFPP 11 69 721.4220799897547 1440.829607046309 2 721.4218627810478 MULTI CID FTMS 0 0 0 8812 100341.1640625 0.5651802418738064 4 -0.1645126342773437 1 Unmodified _WQKLIVWKFPP_ ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10 1.4819007175156935 0.86815623132643 2 Y 1 11 4.6041 0.0 0.0 0.31954 0.0 0.0 720.4657897629094 554.2793673150999 1274.7451570780092 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.31954 - 27 + 1 1.995 43063.2 0.4099999964237213 5118 3693 8812 DOHH2_400M_050219_2,8813 DOHH2_400M_050219_2,8813,WQKLIVWKFPP False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8814 50.747 270.0 200340.0 25 0 11689.0 + 6942 EEGPDVLRW 9 81 550.7728270453555 1099.5311011575109 2 550.7733032107353 MULTI CID FTMS 0 0 0 8812 169269.828125 0.653650398699948 -1 0.0398406982421875 2 Unmodified _EEGPDVLRW_ ENSG00000100934|ENST00000307712|SEC23A;ENSG00000101310|ENST00000650089|SEC23B;nc|ENSG00000100934|Q15436-2|SEC23A 39.94969957227396 0.0757326808254658 2 EEGPDV{I|L}RW 9 0 + 72.643 0.0 0.0 6.6067 6.6067 92.634 0.0 0.0 0.0 56.52372200412145 11.962724883926654 11.962724883926654 17.50630971391878 0 0.3252574989159953 1.6989700043360187 0.0 0.3807196863200844 + + EEGPDV{I|L}RW;EEGPDVW[R{I|L}];[DP]K[{I|L}P]HPG[HC];[R{I|L}][R{M(Oxidation (M))|F}]DPG[HC];[PG][VS][{I|L}P]HPG[HC] 6.6067;5.0146;2.13;2.0331;1.4222 +;-;-;-;- + 192 + 1 1.995 48458.7 1.0 5119 3693 8812 DOHH2_400M_050219_2,8814 DOHH2_400M_050219_2,8814,EEGPDVLRW True True EEGPDVLRW 50.747175 550.773303210735 2629674.5 8812.0 nc|ENSG00000100934|Q15436-2|SEC23A;;ENSG00000100934|ENST00000307712|SEC23A;;ENSG00000101310|ENST00000650089|SEC23B 8.460411866505941 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8815 50.761 800.0 99295.0 25 0 8503.2 + -1 FFFYCLFCFVI 11 82 781.860796540224 1561.707040147248 2 782.3655883669853 MULTI CID FTMS 0 0 0 8812 108845.203125 0.1521421751611362 13 -0.4231758117675781 3 2 Carbamidomethyl (C) _FFFYC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))FVI_ REV__ENSG00000164197|ENST00000389100|RNF180 6.723162845929126 0.8434276150410019 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQV{I|L} 13 -1 + 74.271 0.0 0.0 4.7557 4.7557 72.959 0.0 0.0 0.0 1.5296746020854357 9.189708671962508 1.5296746020854357 1.5296746020854357 0 0.718765315847925 1.5228787452803376 0.0 1.110924374808178 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]{I|L}EA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]NA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQ{I|L}EA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[HD]EAQQGGA{M(Oxidation (M))|F}YQV{I|L} 4.7557;4.6578;4.4038;4.2575;4.1748;4.1748;4.1748;4.1595;4.0768;4.0768 -;-;-;-;-;-;-;-;-;- 1733 1 1.995 60082.7 0.4000000059604645 5120 3693 8812 DOHH2_400M_050219_2,8815 DOHH2_400M_050219_2,8815,FFFYCLFCFVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8817 50.766 30.0 1636400.0 25 0 154040.0 + 30082 QVDPLSALKY 10 80 567.3134660948167 1132.612379256433 2 567.3137084841728 MULTI CID FTMS 0 0 0 8816 1927763.625 0.9670150621783404 2 -0.1023178100585937 1 Unmodified _QVDPLSALKY_ ENSG00000128585|ENST00000352689|MKLN1;ENST00000494785.5_1_7:131012658-131163543:+|nuORF;ENST00000497746.1_1_7:131149041-131155790:+|nuORF;ENST00000498778.5_1_7:131151082-131172419:+|nuORF;nc|ENSG00000128585|Q9UL63-2|MKLN1 40.23920728925047 0.1550410903091231 2 {[QV]|[N{I|L}]|[RA]|[KV]}DP{I|L}SA{I|L}KY 10 0 + 69.804 0.0 0.0 6.1631 6.1631 93.624 0.0 0.0 0.0 44.1256052219986 13.521825181113629 13.521825181113629 69.80433741874718 0 0.2887254899964357 2.0 0.0 0.3252574989159953 + + {[QV]|[N{I|L}]|[RA]|[KV]}DP{I|L}SA{I|L}KY 6.1631 + + 238 + 1 1.995 42915.4 1.0 5121 3694 8816 DOHH2_400M_050219_2,8817 DOHH2_400M_050219_2,8817,QVDPLSALKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8818 50.772 331.0 129720.0 25 0 13944.0 -1 TDLGRFDSMV 10 82 578.7699427569391 1155.5253325806782 2 578.7692748904228 MULTI CID FTMS 0 0 0 8816 95372.578125 0.3853636020643488 4 -0.1479072570800781 2 Oxidation (M) _TDLGRFDSM(Oxidation (M))V_ ENSG00000186862|ENST00000619208|PDZD7;ENST00000474125.6_1_10:102770610-102771988:-|nuORF 20.453626601364224 0.5043500229302764 2 SY 2 -1 20.969 0.0 0.0 1.8147 0.0 0.0 887.4191446918095 0.0 887.4191446918095 0.0 4.554687406276013 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 1.8147 - 224 + 1 1.995 38914.2 1.0 5122 3694 8816 DOHH2_400M_050219_2,8818 DOHH2_400M_050219_2,8818,TDLGRFDSMV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8819 50.781 543.0 223400.0 25 0 19930.0 -1 0 77 914.9396265804892 1827.8647002277785 2 915.944384753704 MULTI CID FTMS 0 0 0 8816 201922.78125 0.3723526287752866 -4 0.1622123718261718 3 2 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YE[{I|L}P] 15 -1 + 107.05 0.0 0.0 5.8565 5.8565 85.346 0.0 0.0 0.0 11.08548320420131 77.08342832424712 11.08548320420131 9.030899869919438 0 0.0 1.6989700043360187 0.4247425010840047 1.1989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QNA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]NA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQGGA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QGGA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]GGA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG][AG]NA{M(Oxidation (M))|F}YE[{I|L}P];[YQ]{M(Oxidation (M))|F}QS{[HG]|PP}QNA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA[WP][VG][{I|L}P];[Y{M(Oxidation (M))|F}]QQS{[HG]|PP}QNA{M(Oxidation (M))|F}YE[{I|L}P] 5.8565;5.3625;5.3625;5.3625;4.8693;4.8693;4.8693;4.3202;3.9807;3.8329 -;-;-;-;-;-;-;-;-;- 3166 1 1.995 86353.2 1.0 5123 3694 8816 DOHH2_400M_050219_2,8819 DOHH2_400M_050219_2,8819, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8820 50.795 767.0 105190.0 25 0 7675.2 + 24323 MEEPISLHTW 10 102 621.7946108270033 1241.5746687208066 2 622.2963744997978 MULTI CID FTMS 0 0 0 8816 83233.2421875 1.0 0 0.0 4 Unmodified _MEEPISLHTW_ ENST00000318410.11_1_8:126096196-126103965:-|nuORF 65.23502041540118 0.0228537820337083 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EP{I|L}{[TV]|[{I|L}S]}HTW 10 0 + 62.413 0.0 0.0 5.0269 5.0269 88.421 0.0 0.0 0.0 34.48629316097296 10.0 10.0 31.22486274231747 0 0.9247425010840048 0.0 1.7302046884880935 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EP{I|L}{[TV]|[{I|L}S]}HTW;{[YD]|[{M(Oxidation (M))|F}M]}[HA]{I|L}{[TV]|[{I|L}S]}HTW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{[CT]|[{M(Oxidation (M))|F}G]}T[{I|L}P]RY;[{I|L}P]S[H{I|L}]TWE{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YD]|[{M(Oxidation (M))|F}M]}EWT[{I|L}P]RY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{[CT]|[{M(Oxidation (M))|F}G]}[{I|L}P]TRY;[HT]V[{I|L}P]TWE{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{[NV]|[RG]}S[KT]TW;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{[DA]|[EG]}T[{I|L}P]RY;{[YD]|[{M(Oxidation (M))|F}M]}E[{I|L}P]WTRY 5.0269;2.512;2.2034;1.8119;1.7369;1.6404;1.4231;1.4174;1.2767;1.1749 +;-;-;-;-;-;-;-;-;- + 715 + 1 1.995 64793.4 1.0 5124 3694 8816 DOHH2_400M_050219_2,8820 DOHH2_400M_050219_2,8820,MEEPISLHTW True True MEEPISLHTW 50.794742 621.7954 705845.5 8816.0 ENST00000318410.11_1_8:126096196-126103965:-|nuORF 7.771805604298909 2.0 True 10.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8821 50.809 800.0 37331.0 25 0 1950.4 -1 0 53 1034.484759813663 3100.432450041189 3 1035.151049792767 MULTI CID FTMS 0 0 0 8816 98976.046875 1.0 0 0.0 5 2 [QP]VN 4 -1 8.4164 0.0 0.0 0.27146 0.0 0.0 0.0 2659.187918141052 2659.187918141052 1.426675035687312 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [QP]VN 0.27146 - 24 1 1.995 31725.0 0.3700000047683716 5125 3694 8816 DOHH2_400M_050219_2,8821 DOHH2_400M_050219_2,8821, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8823 50.816 259.0 179920.0 25 0 17472.0 + 562 AEIIKEDLW 9 78 558.8003652461379 1115.5861775590756 2 558.8002197146416 MULTI CID FTMS 0 0 0 8822 189083.53125 0.3653192634847738 3 -0.1003265380859375 1 Unmodified _AEIIKEDLW_ ENSG00000189241|ENST00000368608|TSPYL1 23.78978130925829 0.2284941198415988 2 {[CP]|[EA]}{I|L}[TA]{I|L}{I|L}{[CP]|[EA]}W 10 5 + 37.14 0.0 0.0 3.3292 3.3292 49.626 0.0 0.0 0.0 4.259687322722812 7.179250024847264 4.259687322722812 0.0 0 1.3494850021680094 0.0 0.0 0.0 {[CP]|[EA]}{I|L}[TA]{I|L}{I|L}{[CP]|[EA]}W;{[CP]|[EA]}{I|L}[TA]{I|L}{[CP]|[EA]}{I|L}W;WW{I|L}{I|L}{[CP]|[EA]}{I|L}W;WW{I|L}{I|L}{I|L}{[CP]|[EA]}W;{[CP]|[EA]}[TA]{I|L}{I|L}{[CP]|[EA]}{I|L}W;{[CP]|[EA]}[TA]{I|L}{I|L}{I|L}{[CP]|[EA]}W;[TA]{[CP]|[EA]}{I|L}{I|L}{I|L}{[CP]|[EA]}W;[TA]{[CP]|[EA]}{I|L}{I|L}{[CP]|[EA]}{I|L}W;{[QN]|[E{I|L}]|[KN]}A[TA]{I|L}{I|L}{[CP]|[EA]}W;{[QN]|[E{I|L}]|[KN]}A[TA]{I|L}{[CP]|[EA]}{I|L}W 3.3292;3.3292;2.9474;2.9474;2.881;2.881;2.4898;2.4898;2.3413;2.3413 -;-;-;-;-;-;-;-;-;- 163 1 1.995 40711.6 1.0 5126 3695 8822 DOHH2_400M_050219_2,8823 DOHH2_400M_050219_2,8823,AEIIKEDLW False True AEIIKEDLW 50.815956 558.800219714642 6489085.0 8822.0 ENSG00000189241|ENST00000368608|TSPYL1 4.952953974405925 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8824 50.823 389.0 157940.0 25 0 11129.0 -1 0 67 887.4128753554018 1772.8111977776034 2 887.4124633669853 MULTI CID FTMS 0 0 0 8822 168841.4375 0.3120675872680687 5 -0.1262626647949218 2 2 QY{M(Oxidation (M))|F}ANQQAE[DG]C(Carbamidomethyl (C)){I|L} 13 -1 82.002 0.0 0.0 4.6255 0.0 0.0 230.1694263926409 0.0 230.1694263926409 0.0 72.53778861430081 0.0 0.0 0 0.3494850021680094 0.0 0.0 1.2302046884880935 QY{M(Oxidation (M))|F}ANQQAE[DG]C(Carbamidomethyl (C)){I|L} 4.6255 - 708 + 1 1.995 50071.4 1.0 5127 3695 8822 DOHH2_400M_050219_2,8824 DOHH2_400M_050219_2,8824, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8825 50.837 800.0 173700.0 25 0 33881.0 9069 FFCRGDLS 8 110 472.7175642565308 943.4205755798616 2 472.7177001833916 MULTI CID FTMS 0 0 0 8822 126934.1875 0.5095074156462246 -2 0.082794189453125 3 Unmodified _FFCRGDLS_ L1MC3_dup7320|chrX:70161794-70162664:+|1.112392509996284|0.2551508396873335|2.12|48.0|62|3|anti-sense 5.760428011301431 0.7893668129297577 2 V 1 8 5.4846 0.0 0.0 0.58135 0.0 0.0 309.02442133553035 532.3043881774144 841.3288095129446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.58135 - 52 + 1 1.995 109539.6 0.4600000083446502 5128 3695 8822 DOHH2_400M_050219_2,8825 DOHH2_400M_050219_2,8825,FFCRGDLS False False False False ERV PXD020620_cell_line DOHH2_400M_050219_2 8826 50.849 733.0 81378.0 25 0 9531.7 + 32163 RVSDINFTL 9 66 532.7899439348798 1063.5653349365596 2 532.7902709841728 MULTI CID FTMS 0 0 0 8822 117518.765625 1.0 0 0.0 4 Unmodified _RVSDINFTL_ ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3 21.53697664764585 0.2571576504437394 2 [{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}N{M(Oxidation (M))|F}T{I|L} 9 3 + 40.542 0.0 0.0 3.8119 3.8119 79.091 0.0 0.0 0.0 12.164537177296497 25.902887499330724 12.164537177296497 9.208187539523747 0 0.7742275032520141 1.0457574905606752 0.0 0.6989700043360187 [{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}N{M(Oxidation (M))|F}T{I|L};[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GG{M(Oxidation (M))|F}T{I|L};[{I|L}T]{[WN]|[YH]}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}T{I|L};[{I|L}T][QT]A{[VA]|[{I|L}G]}{M(Oxidation (M))|F}T{I|L};[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{[ES]|[DT]|[{I|L}C]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ET]|[MV]}{[NV]|[RG]}A{[VA]|[{I|L}G]}{M(Oxidation (M))|F}T{I|L} 3.8119;2.9461;1.9085;1.791;0.92156;0.40726 -;-;-;-;-;- 180 1 1.995 52379.6 1.0 5129 3695 8822 DOHH2_400M_050219_2,8826 DOHH2_400M_050219_2,8826,RVSDINFTL False True RVSDINFTL 50.849492 532.790270984173 532464.8125 8822.0 nc|ENSG00000110075|Q5H9R7-6|PPP6R3;;ENSG00000110075|ENST00000393800|PPP6R3;;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;;nc|ENSG00000110075|Q5H9R7-3|PPP6R3;;nc|ENSG00000110075|Q5H9R7-5|PPP6R3 5.509207725524902 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8827 50.863 800.0 59342.0 25 0 4847.3 + -1 YQWRWTNTFLC 11 64 787.8647038404202 1573.7148547476404 2 788.3672363162041 MULTI CID FTMS 0 0 0 8822 94999.953125 1.0 0 0.0 5 Carbamidomethyl (C) _YQWRWTNTFLC(Carbamidomethyl (C))_ REV__ENST00000374866.7_1_2:189968999-189975048:-|nuORF 1.3295316138638542 0.8688751186870782 2 [KT]EY{M(Oxidation (M))|F}ANQQAE 11 -1 74.896 0.0 0.0 4.7592 0.0 0.0 0.0 261.0636385553344 261.0636385553344 58.2408640817346 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 1.2302046884880935 [KT]EY{M(Oxidation (M))|F}ANQQAE 4.7592 - 438 + 1 1.995 39878.9 0.3799999952316284 5130 3695 8822 DOHH2_400M_050219_2,8827 DOHH2_400M_050219_2,8827,YQWRWTNTFLC False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8829 50.871 176.0 297000.0 25 0 20427.0 + 13797 HTDDPLTWDY 10 78 631.7697035934898 1261.5248542537795 2 631.7693359255791 MULTI CID FTMS 0 0 0 8828 280550.71875 0.0664445897237683 10 -0.28564453125 1 Unmodified _HTDDPLTWDY_ ENSG00000108651|ENST00000261708|UTP6;ENST00000583408.5_1_17:30207568-30228646:-|nuORF 69.10491478415734 0.0189654488676922 2 {[WT]|[RM]}DY{I|L}TWDY 9 3 + 76.837 0.0 0.0 6.0908 6.0908 84.746 0.0 0.0 0.0 8.511744483784085 16.478174818886373 8.511744483784085 7.020534381044499 0 0.7887254899964358 1.154901959985743 0.8807196863200843 0.0 {[WT]|[RM]}DY{I|L}TWDY;{[WT]|[RM]}DY{I|L}TEGDY;[HT]DDP{I|L}TWDY;[WD]TY{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RTWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TEGDY;{[{M(Oxidation (M))|F}C]|[YS]}[WE]{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RTEGDY;{[YD]|[{M(Oxidation (M))|F}M]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[VG]TWDY 6.0908;5.5343;5.4161;5.2744;4.7203;4.4817;4.1638;4.1258;3.9252;3.7518 -;-;+;-;-;-;-;-;-;- + 515 1 1.995 45360.3 1.0 5131 3696 8828 DOHH2_400M_050219_2,8829 DOHH2_400M_050219_2,8829,HTDDPLTWDY True True HTDDPLTWDY 50.870633 631.769335925579 217200100.0 8828.0 ENST00000583408.5_1_17:30207568-30228646:-|nuORF;;ENSG00000108651|ENST00000261708|UTP6 8.35684871673584 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8830 50.879 489.0 259130.0 25 0 15432.0 + 33027 SEPDFVAKFY 10 99 601.7901325513737 1201.5657121695474 2 601.7900268435478 MULTI CID FTMS 0 0 0 8828 261438.8125 0.2948013941505861 -6 0.2645301818847656 2 Unmodified _SEPDFVAKFY_ ENSG00000179933|ENST00000319074|C14orf119 31.26834338654808 0.266153677697784 2 {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F}Y 10 0 + 51.943 0.0 0.0 4.323 4.323 83.721 0.0 0.0 0.0 -3.1702408682765792 1.5325774336169928 -3.1702408682765792 16.225536605694046 0 0.3807196863200844 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F}Y;{[ES]|[DT]|[{I|L}C]}P{[QC]|[C(Carbamidomethyl (C))A]}KAVP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ES]|[DT]|[{I|L}C]}P[KC]KAVP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ES]|[DT]|[{I|L}C]}[QA]EKAVP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VPVP{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VA{[QV]|[N{I|L}]|[RA]|[KV]}[NP];{[ES]|[DT]|[{I|L}C]}P{[QC]|[C(Carbamidomethyl (C))A]}KVAP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ES]|[DT]|[{I|L}C]}P[KC]KVAP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ES]|[DT]|[{I|L}C]}P{[QC]|[C(Carbamidomethyl (C))A]}KPD[W{I|L}];{[ES]|[DT]|[{I|L}C]}[QA]EKVAP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.323;2.9726;2.9726;2.5755;2.571;2.4746;2.3022;2.3022;1.9572;1.9051 +;-;-;-;-;-;-;-;-;- + 1873 + 1 1.995 95907.1 1.0 5132 3696 8828 DOHH2_400M_050219_2,8830 DOHH2_400M_050219_2,8830,SEPDFVAKFY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8831 50.89 631.0 74831.0 25 0 5140.6 -1 0 60 1044.505938600841 3130.495986402724 3 1045.175952136517 MULTI CID FTMS 0 0 0 8828 127932.375 0.4815911071239636 -5 0.1944046020507812 3 2 [MN]MV 4 -1 40.445 0.0 0.0 1.292 0.0 0.0 0.0 2652.2197255554115 2652.2197255554115 33.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [MN]MV 1.292 - 39 + 1 1.995 42463.1 1.0 5133 3696 8828 DOHH2_400M_050219_2,8831 DOHH2_400M_050219_2,8831, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8833 50.9 369.0 183140.0 25 0 36577.0 43042 VYFESKIYYV 10 56 655.8377891075345 1309.661025281869 2 656.3392211794853 MULTI CID FTMS 0 0 0 8832 104813.171875 0.1138329149870423 8 -0.2271003723144531 1 Unmodified _VYFESKIYYV_ ENST00000367287.4_1_1:201939235-201939328:+|nuORF 10.823927491677226 0.6659270209832991 2 VY 2 8 22.959 0.0 0.0 1.753 0.0 0.0 1029.5189792387032 0.0 1029.5189792387032 0.0 9.146518864155125 0.0 0.0 0 0.5 0.0 0.0 0.0 + VY 1.753 + + 26 + 1 1.995 56053.3 1.0 5134 3697 8832 DOHH2_400M_050219_2,8833 DOHH2_400M_050219_2,8833,VYFESKIYYV False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8834 50.909 535.0 158860.0 25 0 17889.0 + 39753 VELLKKEI 8 104 486.3104673413807 970.6063817495614 2 486.3102294802666 MULTI CID FTMS 0 0 0 8832 150781.984375 0.584078579673075 -5 0.2043533325195312 2 Unmodified _VELLKKEI_ ENSG00000168256|ENST00000393885|NKIRAS2;ENSG00000197885|ENST00000425478|NKIRAS1;nc|ENSG00000168256|Q9NYR9-2|NKIRAS2 43.85829265575387 0.1697421968005898 2 {I|L}D{I|L}{M(Oxidation (M))|F}{I|L}K{I|L} 7 5 60.253 0.0 0.0 6.2078 0.0 0.0 0.0 125.07248865299064 125.07248865299064 37.26017550314786 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 {I|L}D{I|L}{M(Oxidation (M))|F}{I|L}K{I|L} 6.2078 - 344 + 1 1.995 70655.5 1.0 5135 3697 8832 DOHH2_400M_050219_2,8834 DOHH2_400M_050219_2,8834,VELLKKEI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8837 50.929 800.0 125810.0 25 0 10747.0 -1 SYLCEMCQY 9 113 598.7267604554851 1195.43896797777 2 598.7272216677666 MULTI CID FTMS 0 0 0 8836 113773.6796875 0.2665644475426518 -1 0.0040626525878906 1 Carbamidomethyl (C) _SYLC(Carbamidomethyl (C))EMCQY_ chr1:206053265-206056179|26|15.38|0.64|4.59|+|2|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056179,206058429|RHEX,None|21;chr1:206053265-206056224|35|14.69|0.74|4.32|+|2|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056224,206058429|RHEX,None|20;chr1:206053265-206056227|32|13.19|0.57|4.52|+|2|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056227,206058429|RHEX,None|20 15.847184025352805 0.4077185912009129 2 YT 2 -1 43.065 0.0 0.0 3.6024 0.0 0.0 0.0 928.30524622135 928.30524622135 24.965598778126704 0.0 0.0 0.0 0 0.5629529932484498 1.6989700043360187 0.4247425010840047 0.0 YT 3.6024 - 156 + 1 1.995 76781.1 0.5 5136 3699 8836 DOHH2_400M_050219_2,8837 DOHH2_400M_050219_2,8837,SYLCEMCQY False False False False TE_chimeric_transcript PXD020620_cell_line DOHH2_400M_050219_2 8838 50.935 300.0 249560.0 25 0 15891.0 + 29013 QEDLRTFSW 9 103 591.2831415217349 1180.5517301102698 2 591.2819702029228 MULTI CID FTMS 0 0 0 8836 128011.2421875 0.1432337089810977 -6 0.1871833801269531 2 Unmodified _QEDLRTFSW_ ENSG00000145907|ENST00000356245|G3BP1 24.99096001346401 0.2132109383330889 2 QED{I|L}A 5 5 43.091 0.0 0.0 3.6501 0.0 0.0 0.0 621.2650850885374 621.2650850885374 17.39023842381954 0.0 0.0 0.0 0 0.1109243748081781 0.8538719643217619 0.0 0.0 QED{I|L}A 3.6501 - 91 + 1 1.995 60647.8 1.0 5137 3699 8836 DOHH2_400M_050219_2,8838 DOHH2_400M_050219_2,8838,QEDLRTFSW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8840 50.94 50.0 792320.0 25 0 73801.0 + 577 AEINNIIKI 9 56 514.3109951752583 1026.6074374173163 2 514.3111450076103 MULTI CID FTMS 0 0 0 8839 1000668.9375 0.457719156086414 5 -0.18255615234375 1 Unmodified _AEINNIIKI_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;ENST00000491510.1_1_3:25668659-25671642:-|nuORF;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 43.85829265575387 0.0542763391141878 2 {[CP]|[EA]}{I|L}NN{I|L}{I|L}K{I|L} 9 0 + 38.765 0.0 0.0 3.776 3.776 79.652 0.0 0.0 0.0 14.851453248366802 11.082268588648256 11.082268588648256 9.208187539523756 0 0.7429928190999391 0.0 0.0 0.3252574989159953 + + {[CP]|[EA]}{I|L}NN{I|L}{I|L}K{I|L};{[CP]|[EA]}{I|L}GGN{I|L}{I|L}K{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}[RN][RK];{[QV]|[N{I|L}]|[RA]|[KV]}N{I|L}[RN][RK];{[QV]|[N{I|L}]|[RA]|[KV]}GG{I|L}[RN][RK] 3.776;2.879;1.5714;1.2781;0.37592 +;-;-;-;- + 65 + 1 1.995 42583.6 1.0 5138 3700 8839 DOHH2_400M_050219_2,8840 DOHH2_400M_050219_2,8840,AEINNIIKI True True AEINNIIKI 50.939649 514.31114500761 36332398.5 8839.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;ENSG00000131747|ENST00000423485|TOP2A;;ENST00000491510.1_1_3:25668659-25671642:-|nuORF;;nc|ENSG00000131747|P11388-2|TOP2A;;ENSG00000077097|ENST00000264331|TOP2B 4.376365184783936 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8841 50.95 608.0 141370.0 25 0 20773.0 + 6980 EELERILVY 9 109 582.3532446594774 1162.6919363857546 2 582.3529540896416 MULTI CID FTMS 0 0 0 8839 123847.8515625 0.4853362106380018 -4 0.0715255737304687 2 Unmodified _EEIKKKILY_ ENSG00000185344|ENST00000330342|ATP6V0A2 8.593279151180031 0.6146971463335029 2 {I|L}ESA[KP]VY 8 6 24.092 0.0 0.0 2.0721 0.0 0.0 257.1845033796984 0.0 257.1845033796984 0.0 1.8732128972452955 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {I|L}ESA[KP]VY 2.0721 - 166 + 1 1.995 72517.8 1.0 5139 3700 8839 DOHH2_400M_050219_2,8841 DOHH2_400M_050219_2,8841,EEIKKKILY False False EELERILVY 50.950276 582.352954089642 411892.65625 8839.0 ENSG00000185344|ENST00000330342|ATP6V0A2 6.872368812561035 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8842 50.953 140.0 132270.0 25 0 13535.0 -1 YSTDTNFSDM 10 46 399.4869008782189 1195.4388732348566 3 399.4867736697197 MULTI CID FTMS 0 0 0 8839 251025.828125 1.0 0 0.0 3 Oxidation (M) _YSTDTNFSDM(Oxidation (M))_ ENSG00000174437|ENST00000539276|ATP2A2;ENST00000313432.5_1_12:110783758-110784272:+|nuORF;nc|ENSG00000174437|P16615-4|ATP2A2 1.7422754331352035 0.7185774482633845 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 20191.3 1.0 5140 3700 8839 DOHH2_400M_050219_2,8842 DOHH2_400M_050219_2,8842,YSTDTNFSDM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8843 50.956 135.0 330200.0 25 0 18636.0 + -1 TYFMCGLSW 9 82 590.7435556040384 1179.4725582748767 2 590.7440063357353 MULTI CID FTMS 0 0 0 8839 233419.609375 1.0 0 0.0 4 Carbamidomethyl (C),Oxidation (M) _TYFM(Oxidation (M))C(Carbamidomethyl (C))GLSW_ REV__ENSG00000142731|ENST00000270861|PLK4;REV__nc|ENSG00000142731|O00444-2|PLK4;REV__nc|ENSG00000142731|O00444-3|PLK4 7.910154910731844 0.6385446671287552 2 YT 2 -1 29.553 0.0 0.0 2.5056 0.0 0.0 0.0 912.3400972955686 912.3400972955686 11.593793813122062 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 YT 2.5056 - 32 + 1 1.995 40872.7 1.0 5141 3700 8839 DOHH2_400M_050219_2,8843 DOHH2_400M_050219_2,8843,TYFMCGLSW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8845 50.961 60.0 742550.0 25 0 44036.0 -1 0 58 881.412242313419 1760.809931693638 2 881.9073974490166 MULTI CID FTMS 0 0 0 8844 898135.75 0.0666688750177224 18 -0.6456871032714844 1 2 [KT]KY{M(Oxidation (M))|F}ADQQA[CS]VC(Carbamidomethyl (C)){I|L} 15 -1 + 82.317 0.0 0.0 4.675 4.675 74.544 0.0 0.0 0.0 64.87002527416834 14.304461535987445 14.304461535987445 3.0102999566398125 0 0.0 0.0 0.4247425010840047 0.4247425010840047 [KT]KY{M(Oxidation (M))|F}ADQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}WQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}WQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQ[AG]A[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}AD[AG]QA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQA[CS]V[CG]{I|L};[KT]KY{M(Oxidation (M))|F}ADQQE[KC]C(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}WQQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}WQQA[CS]C(Carbamidomethyl (C))V{I|L} 4.675;4.504;4.295;4.295;4.1621;4.1621;4.1621;4.1241;4.1241;4.1241 -;-;-;-;-;-;-;-;-;- 1868 + 1 1.995 38227.2 1.0 5142 3701 8844 DOHH2_400M_050219_2,8845 DOHH2_400M_050219_2,8845, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8846 50.975 800.0 100200.0 25 0 13040.0 + 42211 VSFVHSISL 9 117 494.77674143743167 987.5389299416634 2 494.7765991091728 MULTI CID FTMS 0 0 0 8844 98396.9140625 0.8359618917602749 -1 0.0209846496582031 2 Unmodified _VSFVHSISL_ ENST00000456319.5_2_2:47397898-47403621:-|nuORF;ENST00000489742.1_1_2:47397901-47403439:-|nuORF 78.14939416004806 0.0179651292570206 2 VHVS{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L} 9 5 + 56.053 0.0 0.0 5.676 5.676 78.566 0.0 0.0 0.0 21.050457179771712 0.2997638535310898 0.2997638535310898 3.0102999566398125 0 0.0 0.8239087409443188 0.2742275032520141 0.0 VHVS{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L};VHV{I|L}S{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L};VH{I|L}VS{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L};VS[HV]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L};VH{I|L}[PA]HVC{I|L};VHV{I|L}C{I|L}H[PA];VHV[YR]VC{I|L};VS{M(Oxidation (M))|F}VH{I|L}{[WT]|[RM]};V{M(Oxidation (M))|F}SVH{I|L}{[WT]|[RM]};VHVS{I|L}{M(Oxidation (M))|F}{[WT]|[RM]} 5.676;5.3712;4.8881;4.8706;4.4993;4.363;4.3265;4.3202;4.113;4.0809 -;-;-;-;-;-;-;-;-;- 1764 + 1 1.995 62959.0 0.9900000095367432 5143 3701 8844 DOHH2_400M_050219_2,8846 DOHH2_400M_050219_2,8846,VSFVHSISL True True VSFVHSISL 50.975045 494.776599109173 706786.4375 8844.0 ENST00000456319.5_2_2:47397898-47403621:-|nuORF;;ENST00000489742.1_1_2:47397901-47403439:-|nuORF 5.963868141174316 2.0 True 9.0 False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8847 50.985 583.0 262390.0 25 0 46264.0 + 44126 YLDKEDTFFY 10 118 670.8061945659499 1339.5978361986995 2 670.8053466677666 MULTI CID FTMS 0 0 0 8844 172111.890625 0.8478296877831029 -1 0.0209846496582031 3 Unmodified _YLDKEDTFFY_ ENSG00000057935|ENST00000405094|MTA3;nc|ENSG00000057935|Q9BTC8-2|MTA3 53.31671820480216 0.0606844387689228 2 [Y{I|L}]DTQD{I|L}Y{M(Oxidation (M))|F}Y 10 4 + 82.735 0.0 0.0 6.1761 6.1761 77.18 0.0 0.0 0.0 17.941646600941155 16.532125137753454 16.532125137753454 0.541134294324138 0 1.7134679910804405 2.0 1.3539171939081172 0.0 [Y{I|L}]DTQD{I|L}Y{M(Oxidation (M))|F}Y;[Y{I|L}]DQTD{I|L}Y{M(Oxidation (M))|F}Y;[Y{I|L}]DKEDT{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;[Y{I|L}]DT[AG]D{I|L}Y{M(Oxidation (M))|F}Y;[Y{I|L}]D[AG]TD{I|L}Y{M(Oxidation (M))|F}Y;[Y{I|L}]DWWT{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;[Y{I|L}]DT[VG]DT{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;[Y{I|L}]DTWW{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;[Y{I|L}]WWDT{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;[Y{I|L}]DK{M(Oxidation (M))|F}EDT{M(Oxidation (M))|F}Y 6.1761;6.1357;5.5972;5.492;5.4516;5.3711;5.3097;5.1867;5.1056;5.0962 -;-;+;-;-;-;-;-;-;- + 6119 1 1.995 114553.8 1.0 5144 3701 8844 DOHH2_400M_050219_2,8847 DOHH2_400M_050219_2,8847,YLDKEDTFFY True True YLDKEDTFFY 50.98527 670.805346667767 1704645.875 8844.0 nc|ENSG00000057935|Q9BTC8-2|MTA3;;ENSG00000057935|ENST00000405094|MTA3 7.950783093770345 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8848 50.999 800.0 163420.0 25 0 37704.0 -1 0 86 1027.005427472592 2051.9963020119844 2 1027.508105456829 MULTI CID FTMS 0 0 0 8844 101051.90625 0.9000635454698036 6 -0.2447357177734375 4 2 {[HG]|PP}YPPPPP[HQ][C(Carbamidomethyl (C))H]P 13 -1 45.209 0.0 0.0 2.2032 0.0 0.0 0.0 547.2483521430969 547.2483521430969 21.11829144441149 0.0 0.0 0.0 0 1.0 0.0 0.0 0.3494850021680094 {[HG]|PP}YPPPPP[HQ][C(Carbamidomethyl (C))H]P 2.2032 - 1896 1 1.995 93225.6 0.3700000047683716 5145 3701 8844 DOHH2_400M_050219_2,8848 DOHH2_400M_050219_2,8848, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8850 51.016 800.0 86426.0 25 0 6313.1 -1 0 77 1057.84985215418 3170.52772706274 3 1058.185473620892 MULTI CID FTMS 0 0 0 8849 112562.1484375 0.7940298009000428 -2 0.0642662048339843 1 2 D[WH]VM{[QD]|[EN]|[WG]|[KD]|[RS]} 7 -1 33.244 0.0 0.0 1.0485 0.0 0.0 2241.0747886231056 0.0 2241.0747886231056 0.0 20.848848985623647 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 D[WH]VM{[QD]|[EN]|[WG]|[KD]|[RS]} 1.0485 - 170 1 1.995 53132.5 0.3400000035762787 5146 3702 8849 DOHH2_400M_050219_2,8850 DOHH2_400M_050219_2,8850, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8851 51.022 358.0 225890.0 25 0 19281.0 + 25495 NELPGLKW 8 99 478.7637783642536 955.5130037953072 2 478.7637512087822 MULTI CID FTMS 0 0 0 8849 175518.921875 0.0675879867988514 -5 0.1088104248046875 2 Unmodified _NELPGLKW_ ENSG00000037474|ENST00000264670|NSUN2;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 54.773552608820026 0.1167943196628344 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG{I|L}KW 8 0 + 43.581 0.0 0.0 4.561 4.561 84.529 0.0 0.0 0.0 31.798663819199984 10.43305028184122 10.43305028184122 15.555478620337055 0 0.9247425010840048 0.0 0.0 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG{I|L}KW;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG[WK]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}G[{I|L}P]{I|L}KW;{[QD]|[EN]|[WG]|[KD]|[RS]}G[{I|L}P][WK]{I|L} 4.561;2.9331;2.4692;0.84124 +;-;-;- + 125 + 1 1.995 66362.2 1.0 5147 3702 8849 DOHH2_400M_050219_2,8851 DOHH2_400M_050219_2,8851,NELPGLKW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8852 51.027 279.0 222010.0 25 0 13221.0 + 12348 GTDELRLLY 9 95 540.2902993078975 1078.566045682595 2 540.2906371951103 MULTI CID FTMS 0 0 0 8849 136867.109375 0.0676221773138416 -5 0.1088104248046875 3 Unmodified _GTDELRLLY_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 49.55428908609986 0.0413471690215031 2 {[SA]|[TG]}DE{I|L}R{I|L}{I|L}Y 9 0 + 66.335 0.0 0.0 6.1503 6.1503 91.14 0.0 0.0 0.0 56.0571258740888 16.478174818886373 16.478174818886373 17.609309280316907 0 1.524227503252014 1.5228787452803376 0.0 0.0 + + {[SA]|[TG]}DE{I|L}R{I|L}{I|L}Y;{[SA]|[TG]}DE{I|L}R{I|L}Y{I|L};{[ES]|[DT]|[{I|L}C]}GE{I|L}R{I|L}{I|L}Y;{[ES]|[DT]|[{I|L}C]}EG{I|L}R{I|L}{I|L}Y;{[ES]|[DT]|[{I|L}C]}GE{I|L}R{I|L}Y{I|L};{[ES]|[DT]|[{I|L}C]}EG{I|L}R{I|L}Y{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}]{[SA]|[TG]}{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}]{I|L}{[SA]|[TG]}{I|L}Y;VV[WE]{[SA]|[TG]}{I|L}{I|L}Y;VV[WE]{I|L}{[SA]|[TG]}{I|L}Y 6.1503;4.5176;4.3882;4.3882;2.7555;2.7555;1.827;1.827;1.2688;1.2688 +;-;-;-;-;-;-;-;-;- + 100 + 1 1.995 53662.0 1.0 5148 3702 8849 DOHH2_400M_050219_2,8852 DOHH2_400M_050219_2,8852,GTDELRLLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8853 51.036 528.0 133180.0 25 0 21030.0 + 29914 QSEIASMLY 9 108 521.2492960831393 1040.4840392330784 2 521.2496826052666 MULTI CID FTMS 0 0 0 8849 123747.75 0.483776752516204 -4 0.0902023315429687 4 Unmodified _QSEIASMLY_ ENSG00000197256|ENST00000586659|KANK2;ENST00000587317.1_1_19:11277236-11281082:-|nuORF;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2 65.23502041540118 0.0231836506122253 2 MATM{I|L}Y 6 5 31.872 0.0 0.0 3.0632 0.0 0.0 312.16642556295966 0.0 312.16642556295966 0.0 7.121148233667629 0.0 0.0 0 0.2742275032520141 0.0 0.8494850021680094 0.0 MATM{I|L}Y 3.0632 - 245 + 1 1.995 56086.1 1.0 5149 3702 8849 DOHH2_400M_050219_2,8853 DOHH2_400M_050219_2,8853,QSEIASMLY True True QSEIASMLY 51.036449 521.249682605267 1399984.625 8849.0 ENSG00000197256|ENST00000586659|KANK2;;ENST00000587317.1_1_19:11277236-11281082:-|nuORF;;nc|ENSG00000197256|Q63ZY3-2|KANK2;;nc|ENSG00000197256|Q63ZY3-3|KANK2 3.616310358047485 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8854 51.042 318.0 225620.0 25 0 29217.0 + 286 ADPHEWSIF 9 86 551.2526685877745 1100.4907842423488 2 551.2522460818291 MULTI CID FTMS 0 0 0 8849 87007.1328125 0.8694933867395016 -2 0.0642662048339843 5 Unmodified _ADPHEWSIF_ REV__ENST00000591789.1_1_19:45989311-45991830:-|nuORF;REV__ENST00000593187.5_1_19:45988968-45991824:-|nuORF 8.593279151180031 0.6146971463335029 2 DV{I|L}RW 5 -1 20.177 0.0 0.0 1.8335 0.0 0.0 413.1230607089488 0.0 413.1230607089488 0.0 6.682437647924218 0.0 0.0 0 0.0 0.0 0.0 0.0 DV{I|L}RW 1.8335 - 94 + 1 1.995 59858.1 1.0 5150 3702 8849 DOHH2_400M_050219_2,8854 DOHH2_400M_050219_2,8854,ADPHEWSIF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8856 51.047 16.0 1958700.0 25 0 237200.0 + 45509 YTSDYFISY 9 53 579.7531624720563 1157.4917720109124 2 579.7534057497978 MULTI CID FTMS 0 0 0 8855 3234747.75 0.819206366451605 1 -0.0342445373535156 1 Unmodified _YTSDYFISY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 23.1484247019978 0.2366544122328345 2 SY 2 7 24.776 0.0 0.0 2.1405 0.0 0.0 889.3854100147795 0.0 889.3854100147795 0.0 2.151734374710159 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + SY 2.1405 + + 66 + 1 1.995 29728.2 1.0 5151 3703 8855 DOHH2_400M_050219_2,8856 DOHH2_400M_050219_2,8856,YTSDYFISY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8857 51.052 270.0 461280.0 25 0 53594.0 -1 0 88 914.9396265804892 1827.8647002277785 2 915.4437744021416 MULTI CID FTMS 0 0 0 8855 364228.9375 0.6199925762553581 2 -0.0751762390136718 2 2 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}Y[EP]{I|L} 15 -1 + 111.97 0.0 0.0 6.1255 6.1255 81.663 0.0 0.0 0.0 4.131806016604358 4.131806016604358 4.131806016604358 4.131806016604358 0 0.3494850021680094 2.0 0.3494850021680094 1.416386562212267 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}Y[EP]{I|L};[KT]KY{M(Oxidation (M))|F}ANQQAEEVC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ANQQAEEVC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ANQQAEEC(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ANQQAEEC(Carbamidomethyl (C))V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QNA{M(Oxidation (M))|F}Y[EP]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQGGA{M(Oxidation (M))|F}Y[EP]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]NA{M(Oxidation (M))|F}Y[EP]{I|L};[KT]QY{M(Oxidation (M))|F}ANQQAEEV[CG]{I|L};[KT]KY{M(Oxidation (M))|F}ANQQAEEV[CG]{I|L} 6.1255;5.8994;5.8994;5.6384;5.6384;5.6314;5.6314;5.6314;5.4054;5.4054 -;-;-;-;-;-;-;-;-;- 4789 1 1.995 87002.4 1.0 5152 3703 8855 DOHH2_400M_050219_2,8857 DOHH2_400M_050219_2,8857, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8858 51.056 211.0 209060.0 25 0 21624.0 + 30083 QVDPLSALKY 10 83 567.3134660948167 1132.612379256433 2 567.3134643435478 MULTI CID FTMS 0 0 0 8855 224376.828125 0.1125531001762084 11 -0.4007644653320312 3 Unmodified _QVDPLSALKY_ ENSG00000128585|ENST00000352689|MKLN1;ENST00000494785.5_1_7:131012658-131163543:+|nuORF;ENST00000497746.1_1_7:131149041-131155790:+|nuORF;ENST00000498778.5_1_7:131151082-131172419:+|nuORF;nc|ENSG00000128585|Q9UL63-2|MKLN1 29.84058131909904 0.2982332456971691 2 {[QV]|[N{I|L}]|[RA]|[KV]}D[{I|L}P]SA{I|L}KY 10 0 + 51.616 0.0 0.0 4.5573 4.5573 87.066 0.0 0.0 0.0 27.74104976468614 11.136218907515314 11.136218907515314 51.61622501717439 0 0.2742275032520141 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}D[{I|L}P]SA{I|L}KY 4.5573 + + 234 + 1 1.995 39001.4 1.0 5153 3703 8855 DOHH2_400M_050219_2,8858 DOHH2_400M_050219_2,8858,QVDPLSALKY False True QVDPLSALKY 51.056074 567.313464343548 43812345.0 8855.0 ENSG00000128585|ENST00000352689|MKLN1;;ENST00000494785.5_1_7:131012658-131163543:+|nuORF;;ENST00000498778.5_1_7:131151082-131172419:+|nuORF;;nc|ENSG00000128585|Q9UL63-2|MKLN1;;ENST00000497746.1_1_7:131149041-131155790:+|nuORF 8.338675498962402 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8859 51.07 800.0 117960.0 25 0 5720.2 -1 0 118 1029.8303734242431 3086.4692908729294 3 1030.501513659954 MULTI CID FTMS 0 0 0 8855 163609.609375 0.1476470777680339 -5 0.1333160400390625 4 2 [MN][QT]NA 6 -1 40.463 0.0 0.0 1.311 0.0 0.0 0.0 2424.120207675312 2424.120207675312 20.509655393942086 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.805462187404089 [MN][QT]NA 1.311 - 4632 + 1 1.995 66018.1 0.4900000095367431 5154 3703 8855 DOHH2_400M_050219_2,8859 DOHH2_400M_050219_2,8859, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8860 51.076 362.0 210910.0 25 0 16336.0 + 11218 GEPPGFLHSW 10 95 563.7689809757943 1125.5234090183883 2 563.7697021365166 MULTI CID FTMS 0 0 0 8855 158166.25 0.6193497165715012 -3 0.1073799133300781 5 Unmodified _GEPPGFLHSW_ ENSG00000130511|ENST00000270061|SSBP4;ENSG00000145687|ENST00000615665|SSBP2;ENSG00000157216|ENST00000610401|SSBP3;ENST00000506960.5_1_5:80911285-80946133:-|nuORF;ENST00000508912.1_1_5:80932374-80946133:-|nuORF;ENST00000589764.1_1_18:12067489-12068164:-|nuORF;ENST00000598159.6_1_19:18538161-18542842:+|nuORF;nc|ENSG00000130511|Q9BWG4-2|SSBP4;nc|ENSG00000145687|P81877-2|SSBP2;nc|ENSG00000145687|P81877-3|SSBP2;nc|ENSG00000145687|P81877-4|SSBP2;nc|ENSG00000145687|P81877-5|SSBP2;nc|ENSG00000145687|P81877|SSBP2;nc|ENSG00000157216|Q9BWW4-2|SSBP3;nc|ENSG00000157216|Q9BWW4-3|SSBP3 56.17704186161178 0.0466144807663799 2 {[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PP{I|L}HSW 10 4 + 63.097 0.0 0.0 5.606 5.606 87.404 0.0 0.0 0.0 33.011525224473814 13.521825181113629 13.521825181113629 10.52378753635658 0 0.8494850021680094 1.3979400086720375 1.1237125054200234 0.0 {[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PP{I|L}HSW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}SH{I|L}PPW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PSH{I|L}PW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}SHP{I|L}PW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}SPH{I|L}PW;{[DA]|[EG]}{[QN]|[E{I|L}]|[KN]}{I|L}PPWW;{[DA]|[EG]}{[QN]|[E{I|L}]|[KN]}{I|L}PWPW;{[DA]|[EG]}[YQ]H{I|L}PPW;{[DA]|[EG]}P[YQ]H{I|L}PW;{[DA]|[EG]}[YQ]HP{I|L}PW 5.606;4.671;4.6546;4.6115;4.6115;4.3378;4.3378;3.9807;3.9212;3.9212 -;-;-;-;-;-;-;-;-;- 1045 + 1 1.995 66142.3 1.0 5155 3703 8855 DOHH2_400M_050219_2,8860 DOHH2_400M_050219_2,8860,GEPPGFLHSW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8862 51.093 800.0 31695.0 25 0 6000.7 24309 MDQCSCQFSY 10 50 606.2097361629806 1210.404919392761 2 606.7112914919853 MULTI CID FTMS 0 0 0 8861 50367.40625 0.5714118579986988 1 -0.0409317016601562 1 Unmodified _MDQCSCQFSY_ ENSG00000070601|ENST00000377765|FRMPD1 1.6526216038709556 0.7189921496796233 2 SY 2 8 14.949 0.0 0.0 1.235 0.0 0.0 942.298670468736 0.0 942.298670468736 0.0 4.569896647110348 0.0 0.0 0 0.0 0.0 0.0 0.0 + SY 1.235 + + 17 + 1 1.995 24655.0 0.4000000059604645 5156 3704 8861 DOHH2_400M_050219_2,8862 DOHH2_400M_050219_2,8862,MDQCSCQFSY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8863 51.104 613.0 146550.0 25 0 14994.0 + 1561 ALLDRIVSV 9 93 493.3060835483514 984.5976141635028 2 493.3058044314384 MULTI CID FTMS 0 0 0 8861 138420.0625 0.8297143334536228 -2 0.0773582458496093 2 Unmodified _ALLDRIVSV_ ENSG00000155561|ENST00000285968|NUP205 45.739877483867886 0.0497104363764649 2 [{I|L}A]{I|L}D 4 5 41.995 0.0 0.0 4.2652 0.0 0.0 0.0 569.3423555963499 569.3423555963499 1.7339374311232802 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3494850021680094 0.0 + [{I|L}A]{I|L}D 4.2652 + + 181 + 1 1.995 73573.2 1.0 5157 3704 8861 DOHH2_400M_050219_2,8863 DOHH2_400M_050219_2,8863,ALLDRIVSV True True ALLDRIVSV 51.103573 493.305804431438 988705.875 8861.0 ENSG00000155561|ENST00000285968|NUP205 5.912537415822347 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8864 51.117 800.0 88936.0 25 0 4518.5 -1 0 86 1010.8110747132 3029.4113947398 3 1011.143908679485 MULTI CID FTMS 0 0 0 8861 81577.921875 0.1622870804366525 -6 0.1675605773925781 3 2 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PA 7 -1 40.563 0.0 0.0 1.339 0.0 0.0 0.0 2256.020683640443 2256.020683640443 28.95915049722128 0.0 0.0 0.0 0 1.0 2.0 0.0 1.048455006504028 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PA 1.339 - 671 1 1.995 54107.5 0.3499999940395355 5158 3704 8861 DOHH2_400M_050219_2,8864 DOHH2_400M_050219_2,8864, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8866 51.135 800.0 86570.0 25 0 5806.6 -1 0 70 1025.4897126598316 3073.447308579696 3 1025.824267566204 MULTI CID FTMS 0 0 0 8865 88973.3046875 0.6921543447053633 -3 0.1182899475097656 1 2 S{[QS]|[NT]} 3 -1 17.249 0.0 0.0 0.56124 0.0 0.0 2753.313624352936 0.0 2753.313624352936 0.0 10.259621790487689 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.3252574989159953 S{[QS]|[NT]} 0.56124 - 225 + 1 1.995 53891.2 0.4000000059604645 5159 3705 8865 DOHH2_400M_050219_2,8866 DOHH2_400M_050219_2,8866, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8867 51.149 800.0 104570.0 25 0 6697.5 + 7042 EELEQFARTF 10 95 635.3085403990839 1268.6025278649677 2 635.3087036013603 MULTI CID FTMS 0 0 0 8865 98524.8828125 1.0 0 0.0 2 Unmodified _EELEQFARTF_ chr19:42092134-42093829|48|27.9|0.5|5.79|-|ENST00000529067|POU2F2,POU2F2;chr19:42099821-42116709|41|13.12|0.46|4.84|-|ENST00000526831|POU2F2,POU2F2;chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2;ENSG00000028277|ENST00000692977|POU2F2;nc|ENSG00000028277|P09086-2|POU2F2;nc|ENSG00000028277|P09086-3|POU2F2;nc|ENSG00000028277|P09086-4|POU2F2;nc|ENSG00000028277|P09086-5|POU2F2;nc|ENSG00000028277|P09086|POU2F2 78.06048673739656 0.0186573233964999 2 EE{I|L}EQ{M(Oxidation (M))|F}ART{M(Oxidation (M))|F} 10 0 + 91.081 0.0 0.0 7.1796 7.1796 90.241 0.0 0.0 0.0 64.7564045197371 15.620878602210723 15.620878602210723 9.164539485499262 0 1.305462187404089 1.6989700043360187 1.0114393726401687 0.4247425010840047 + + EE{I|L}EQ{M(Oxidation (M))|F}ART{M(Oxidation (M))|F};EE{I|L}E[AG]{M(Oxidation (M))|F}ART{M(Oxidation (M))|F};EE{I|L}E[WK]TST{M(Oxidation (M))|F};EE{I|L}EQ{M(Oxidation (M))|F}A[HA][VP];{[{M(Oxidation (M))|F}H]|[RQ]}SEQ{M(Oxidation (M))|F}ART{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}Q[RN]QE{I|L}[HC];EE{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ART{M(Oxidation (M))|F};EE{I|L}E[WK]T[TA]Y;{[{M(Oxidation (M))|F}H]|[RQ]}SE[AG]{M(Oxidation (M))|F}ART{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[RN]QE{I|L}[HC] 7.1796;6.4572;5.4643;5.1838;5.0701;4.9871;4.9278;4.3925;4.3477;4.2898 +;-;-;-;-;-;-;-;-;- + 536 + 1 1.995 70676.1 0.4199999868869781 5160 3705 8865 DOHH2_400M_050219_2,8867 DOHH2_400M_050219_2,8867,EELEQFARTF True True EELEQFARTF 51.148983 635.30870360136 583825.5 8865.0 nc|ENSG00000028277|P09086-4|POU2F2;;nc|ENSG00000028277|P09086|POU2F2;;chr19:42099821-42116709|41|13.12|0.46|4.84|-|ENST00000526831|POU2F2,POU2F2;;chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2;;nc|ENSG00000028277|P09086-3|POU2F2;;nc|ENSG00000028277|P09086-5|POU2F2;;chr19:42092134-42093829|48|27.9|0.5|5.79|-|ENST00000529067|POU2F2,POU2F2;;ENSG00000028277|ENST00000692977|POU2F2;;nc|ENSG00000028277|P09086-2|POU2F2 6.917882124582927 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8869 51.154 116.0 375900.0 25 0 23393.0 + 33028 SEPDFVAKFY 10 68 601.7901325513737 1201.5657121695474 2 601.7898437380791 MULTI CID FTMS 0 0 0 8868 435939.09375 0.4915699064470126 4 -0.1437339782714843 1 Unmodified _SEPDFVAKFY_ ENSG00000179933|ENST00000319074|C14orf119 38.17557092003332 0.1768326257063233 2 {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F}Y 10 0 + 54.954 0.0 0.0 4.5735 4.5735 87.161 0.0 0.0 0.0 -0.1599409116367667 12.909846105818444 -0.1599409116367667 54.95358466288572 0 0.3807196863200844 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}PD{M(Oxidation (M))|F}VAK{M(Oxidation (M))|F}Y 4.5735 + + 318 + 1 1.995 35163.8 1.0 5161 3706 8868 DOHH2_400M_050219_2,8869 DOHH2_400M_050219_2,8869,SEPDFVAKFY False True SEPDFVAKFY 51.15395 601.789843738079 12083751.0 8868.0 ENSG00000179933|ENST00000319074|C14orf119 8.991692225138346 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8870 51.168 800.0 120760.0 25 0 6868.4 + 13798 HTDDPLTWDY 10 94 631.7697035934898 1261.5248542537795 2 631.7691528201103 MULTI CID FTMS 0 0 0 8868 82138.15625 0.0194532957071528 20 -0.7384185791015625 2 Unmodified _HTDDPLTWDY_ ENSG00000108651|ENST00000261708|UTP6;ENST00000583408.5_1_17:30207568-30228646:-|nuORF 88.95385435242217 0.009729780394035 2 [HT]DDP{I|L}TWDY 10 0 + 77.578 0.0 0.0 6.1495 6.1495 89.75 0.0 0.0 0.0 4.884381005764311 63.63773646941111 4.884381005764311 11.787887749990348 0 1.1382104921644451 0.0 1.885151878060192 0.0 + + [HT]DDP{I|L}TWDY;[WD]TY{I|L}TWDY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TWDY;{[WT]|[RM]}DY{I|L}TWDY;[HT]DDP[VP]G{M(Oxidation (M))|F}DY;{[YD]|[{M(Oxidation (M))|F}M]}{[WT]|[RM]}{I|L}TEGDY;{[WT]|[RM]}DY{I|L}TEGDY;[HT]DDP{I|L}G{[ET]|[MV]}DY;{[{M(Oxidation (M))|F}C]|[YS]}[WE]{I|L}TWDY;[NS][NS]Y{I|L}TWDY 6.1495;5.2151;5.1747;5.1161;4.9565;4.697;4.6384;4.4824;4.107;4.0379 +;-;-;-;-;-;-;-;-;- + 1581 1 1.995 78064.0 0.449999988079071 5162 3706 8868 DOHH2_400M_050219_2,8870 DOHH2_400M_050219_2,8870,HTDDPLTWDY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8871 51.173 281.0 230670.0 25 0 39423.0 + 5774 DPPLKFMSV 9 87 517.272871439824 1032.531189946448 2 517.2728149294853 MULTI CID FTMS 0 0 0 8868 218878.890625 0.1953155578513618 -6 0.2141189575195312 3 Unmodified _DPPLKFMSV_ ENSG00000169813|ENST00000682386|HNRNPF 49.55428908609986 0.0413471690215031 2 DPP{I|L}HG[W{I|L}]V 9 4 + 74.078 0.0 0.0 7.1744 7.1744 93.494 0.0 0.0 0.0 42.2062251842808 13.1044805333903 13.1044805333903 14.49092531119419 0 0.8494850021680094 2.0 0.0 0.0 DPP{I|L}HG[W{I|L}]V;DP{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[W{I|L}]V;DP[R{M(Oxidation (M))|F}]T[W{I|L}]V;[{I|L}P]K{M(Oxidation (M))|F}MPD[VS];DP[R{M(Oxidation (M))|F}]{I|L}{I|L}SW;D[{I|L}T]WT[W{I|L}]V;{[ET]|[MV]}VWT[W{I|L}]V;{[CT]|[{M(Oxidation (M))|F}G]}DPVT[W{I|L}]V;{[ET]|[MV]}WVT[W{I|L}]V;[{I|L}P]K{M(Oxidation (M))|F}[HT][YQ] 7.1744;5.771;5.3703;3.6716;3.3152;2.9793;2.6878;2.5615;2.319;2.316 -;-;-;-;-;-;-;-;-;- 237 + 1 1.995 59330.2 1.0 5163 3706 8868 DOHH2_400M_050219_2,8871 DOHH2_400M_050219_2,8871,DPPLKFMSV True True DPPLKFMSV 51.172973 517.272814929485 5667670.5 8868.0 ENSG00000169813|ENST00000682386|HNRNPF 6.0046976407368975 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8872 51.187 800.0 294640.0 25 0 25460.0 + 25456 NEIEDTFRQF 10 122 649.8041812144376 1297.593809495675 2 650.3062011599541 MULTI CID FTMS 0 0 0 8868 103458.8984375 0.0134893220810075 -7 0.235992431640625 4 Unmodified _NEIEDTFRQF_ ENSG00000128524|ENST00000249289|ATP6V1F 135.86342318000737 0.0001951116291863 2 [AG]D{I|L}EDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F} 11 3 [AG]D + + 91.865 16.069 6.6106 7.0796 7.0796 62.735 0.0 0.0 0.0 0.0 34.53086327501582 0.0 0.0 0 2.1549471895720984 0.0 0.9916440611282626 2.305462187404089 [AG]D{I|L}EDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F} 7.0796 - 7123 + 1 1.995 177113.9 0.4399999976158142 5164 3706 8868 DOHH2_400M_050219_2,8872 DOHH2_400M_050219_2,8872,NEIEDTFRQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8873 51.201 794.0 31259.0 25 0 3589.0 -1 0 46 1044.505938600841 3130.495986402724 3 1044.840380847454 MULTI CID FTMS 0 0 0 8868 80154.171875 0.3324521287306162 4 -0.1437339782714843 5 2 APYY 4 -1 16.198 0.0 0.0 0.51742 0.0 0.0 2618.265653006043 0.0 2618.265653006043 0.0 4.208187539523749 0.0 0.0 0 0.0 0.0 0.0 0.0 APYY 0.51742 - 62 + 1 1.995 27795.3 1.0 5165 3706 8868 DOHH2_400M_050219_2,8873 DOHH2_400M_050219_2,8873, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8875 51.206 80.0 555760.0 25 0 46550.0 + 29014 QEDLRTFSW 9 72 591.2831415217349 1180.5517301102698 2 591.2828857302666 MULTI CID FTMS 0 0 0 8874 553437.5 0.6192495632384927 2 -0.0860786437988281 1 Unmodified _QEDLRTFSW_ ENSG00000145907|ENST00000356245|G3BP1 21.53697664764585 0.2571576504437394 2 SW 2 7 22.206 0.0 0.0 1.881 0.0 0.0 889.4297341159323 0.0 889.4297341159323 0.0 7.513487579716767 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + SW 1.881 + + 49 + 1 1.995 41130.7 1.0 5166 3707 8874 DOHH2_400M_050219_2,8875 DOHH2_400M_050219_2,8875,QEDLRTFSW False True QEDLRTFSW 51.206287 591.282885730267 12198170.0 8874.0 ENSG00000145907|ENST00000356245|G3BP1 7.625138282775879 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8876 51.217 609.0 136930.0 25 0 10609.0 + 578 AEINNIIKI 9 106 514.3109951752583 1026.6074374173163 2 514.3114501833916 MULTI CID FTMS 0 0 0 8874 146767.203125 0.0671332524055073 12 -0.4009513854980469 2 Unmodified _AEINNIIKI_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;ENST00000491510.1_1_3:25668659-25671642:-|nuORF;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 56.17704186161178 0.0281986971544335 2 {[CP]|[EA]}{I|L}NN{I|L}{I|L}K{I|L} 9 0 + 44.333 0.0 0.0 4.3184 4.3184 71.968 0.0 0.0 0.0 7.147642715192504 2.108533653148932 2.108533653148932 2.108533653148932 0 1.1435078169319297 0.0 0.0 0.3054621874040891 + + {[CP]|[EA]}{I|L}NN{I|L}{I|L}K{I|L};{[CP]|[EA]}{I|L}NN{I|L}{I|L}{I|L}K;{[CP]|[EA]}{I|L}GGN{I|L}{I|L}K{I|L};{[CP]|[EA]}{I|L}GGN{I|L}{I|L}{I|L}K 4.3184;4.113;3.4214;3.216 +;-;-;- + 302 + 1 1.995 69048.1 1.0 5167 3707 8874 DOHH2_400M_050219_2,8876 DOHH2_400M_050219_2,8876,AEINNIIKI True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8877 51.224 400.0 223760.0 25 0 29772.0 + 36818 TEITDDLHFY 10 86 627.2879195624399 1252.5612861916798 2 627.2878295779228 MULTI CID FTMS 0 0 0 8874 205600.34375 0.9750081229546732 -1 0.0516014099121093 3 Unmodified _TEITDDLHFY_ ENSG00000197157|ENST00000354725|SND1 52.268347100219714 0.0668375294751462 2 {[ET]|[MV]}{I|L}TDD{I|L}H{M(Oxidation (M))|F}Y 10 0 + 42.075 0.0 0.0 3.3591 3.3591 79.56 0.0 0.0 0.0 16.581210825132402 7.870156338638587 7.870156338638587 11.760912590556812 0 0.8252574989159953 0.0 0.0 0.0 + + {[ET]|[MV]}{I|L}TDD{I|L}H{M(Oxidation (M))|F}Y;[PS][SG]H{I|L}DDT{I|L}[DP];{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[NP][WD]{I|L}[DP];[H{I|L}]DD{[NV]|[RG]}DT{I|L}[DP];[H{I|L}]D{[NV]|[RG]}DDT{I|L}[DP];{[DS]|[MA]|[CV]|TT}{[YD]|[{M(Oxidation (M))|F}M]}{[NV]|[RG]}DT{I|L}[DP];{[DS]|[MA]|[CV]|TT}{[YD]|[{M(Oxidation (M))|F}M]}K[WD]{I|L}[DP];[H{I|L}]{M(Oxidation (M))|F}[NP][WD]{I|L}[DP] 3.3591;2.4202;1.9308;1.7152;1.6378;1.6133;0.80713;0.45075 +;-;-;-;-;-;-;- + 447 + 1 1.995 73221.9 1.0 5168 3707 8874 DOHH2_400M_050219_2,8877 DOHH2_400M_050219_2,8877,TEITDDLHFY True True TEITDDLHFY 51.224108 627.287829577923 1236580.25 8874.0 ENSG00000197157|ENST00000354725|SND1 7.663232326507568 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8878 51.238 800.0 136730.0 25 0 7519.1 + 25542 NESAIFHGW 9 137 530.7459177293405 1059.4772825254809 2 530.7461425662041 MULTI CID FTMS 0 0 0 8874 147088.0 0.7628416288918073 -3 0.1240959167480468 4 Unmodified _NESAIFHGW_ ENSG00000213380|ENST00000306875|COG8 74.42276476219924 0.019389277360085 2 {[{M(Oxidation (M))|F}H]|[RQ]}GG{M(Oxidation (M))|F}{I|L}AS 8 8 52.706 0.0 0.0 4.9747 0.0 0.0 0.0 240.0610656103688 240.0610656103688 21.055358251107723 0.0 0.0 0.0 0 0.7134679910804405 0.9208187539523752 0.4247425010840047 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}GG{M(Oxidation (M))|F}{I|L}AS 4.9747 - 1239 1 1.995 85765.4 0.5299999713897705 5169 3707 8874 DOHH2_400M_050219_2,8878 DOHH2_400M_050219_2,8878,NESAIFHGW True True NESAIFHGW 51.237939 530.746142566204 1073502.75 8874.0 ENSG00000213380|ENST00000306875|COG8 7.384325504302978 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8879 51.248 585.0 103630.0 25 0 21970.0 + -1 RRRIKKCF 8 74 582.3532446594774 1162.6919363857546 2 582.3533813357353 MULTI CID FTMS 0 0 0 8874 131607.1875 0.5157435746210021 3 -0.092132568359375 5 Carbamidomethyl (C) _RRRIKKC(Carbamidomethyl (C))F_ REV__ENSG00000204843|ENST00000628224|DCTN1;REV__ENST00000466110.5_1_2:74593906-74595252:-|nuORF;REV__nc|ENSG00000204843|Q14203-2|DCTN1;REV__nc|ENSG00000204843|Q14203-3|DCTN1;REV__nc|ENSG00000204843|Q14203-4|DCTN1;REV__nc|ENSG00000204843|Q14203-5|DCTN1;REV__nc|ENSG00000204843|Q14203-6|DCTN1 0.6903765706972694 0.8201419426409876 2 Y 1 -1 13.099 0.0 0.0 1.1266 0.0 0.0 981.6176546248156 0.0 981.6176546248156 0.0 1.839883926472972 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1266 - 10 + 1 1.995 54168.9 1.0 5170 3707 8874 DOHH2_400M_050219_2,8879 DOHH2_400M_050219_2,8879,RRRIKKCF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8881 51.255 198.0 281850.0 25 0 18665.0 -1 0 68 881.412242313419 1760.809931693638 2 881.9087402224541 MULTI CID FTMS 0 0 0 8880 336150.84375 0.0249525738053191 25 -0.7601509094238281 1 2 [KT]KY{M(Oxidation (M))|F}ANEQA[CS]C(Carbamidomethyl (C))V{I|L} 15 -1 + 84.606 0.0 0.0 4.8049 4.8049 54.691 0.0 0.0 0.0 51.68188624346679 11.222412206649466 11.222412206649466 0.0 0 0.0 0.0 1.174742501084005 0.3807196863200844 [KT]KY{M(Oxidation (M))|F}ANEQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ANEQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ANQEA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ANQEA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}AQDQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}AQDQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}AQNEA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}AQNEA[CS]C(Carbamidomethyl (C))V{I|L} 4.8049;4.8049;4.634;4.634;4.634;4.634;4.534;4.534;4.363;4.363 -;-;-;-;-;-;-;-;-;- 5777 + 1 1.995 44600.2 1.0 5171 3708 8880 DOHH2_400M_050219_2,8881 DOHH2_400M_050219_2,8881, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8882 51.259 219.0 413770.0 25 0 70681.0 + 30319 RADPEAGLLLY 11 54 609.3299604623642 1216.6453679915282 2 609.3298828005791 MULTI CID FTMS 0 0 0 8880 332171.78125 0.13195261825252 -5 0.2059402465820312 2 Unmodified _RADPEAGLLLY_ ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-2|DNA2;nc|ENSG00000138346|P51530-3|DNA2;nc|ENSG00000138346|P51530-4|DNA2 19.62595529434964 0.626904505265593 2 YQ{I|L}{I|L}{I|L}Y 6 7 48.889 0.0 0.0 4.0183 0.0 0.0 405.2040577619157 0.0 405.2040577619157 0.0 37.29486901908295 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 YQ{I|L}{I|L}{I|L}Y 4.0183 - 31 1 1.995 72917.5 1.0 5172 3708 8880 DOHH2_400M_050219_2,8882 DOHH2_400M_050219_2,8882,RADPEAGLLLY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8883 51.262 152.0 332320.0 25 0 38490.0 + 18049 KTDDLTMVLY 10 63 599.8051689474355 1197.595784961671 2 599.8057739138603 MULTI CID FTMS 0 0 0 8880 404836.0 0.9109694707929018 -1 0.0475997924804687 3 Unmodified _KTDDLTMVLY_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 40.23920728925047 0.1550410903091231 2 {M(Oxidation (M))|F}{I|L}TMV{I|L}Y 7 4 74.941 0.0 0.0 6.2576 0.0 0.0 312.1608753888688 0.0 312.1608753888688 0.0 52.72238255897584 0.0 0.0 0 1.424742501084005 0.0 1.774227503252014 0.0 {M(Oxidation (M))|F}{I|L}TMV{I|L}Y 6.2576 - 64 1 1.995 41715.7 1.0 5173 3708 8880 DOHH2_400M_050219_2,8883 DOHH2_400M_050219_2,8883,KTDDLTMVLY False True KTDDLTMVLY 51.261703 599.80577391386 2678720.0 8880.0 ENSG00000197969|ENST00000360280|VPS13A;;nc|ENSG00000197969|Q96RL7-2|VPS13A;;nc|ENSG00000197969|Q96RL7-4|VPS13A;;nc|ENSG00000197969|Q96RL7-3|VPS13A 8.750850359598795 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8884 51.273 638.0 120380.0 25 0 9435.4 + 38357 TQMVRMIL 8 108 496.27483861732753 990.5351243014552 2 496.2749511599541 MULTI CID FTMS 0 0 0 8880 126970.0 0.9217901746710524 1 -0.0384788513183593 4 Unmodified _TQMVRMIL_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 41.8396318013385 0.2035142800366642 2 [QT]MVRM{I|L}{I|L} 8 0 + 43.413 0.0 0.0 4.3828 4.3828 84.399 0.0 0.0 0.0 18.476951859255124 7.3068831343239395 7.3068831343239395 18.476951859255124 0 1.5004836249443 1.0969100130080565 0.3054621874040891 0.25 + + [QT]MVRM{I|L}{I|L};[AG]TMVRM{I|L}{I|L};{[ET]|[MV]}R[YV]{I|L}[NP];{[ET]|[MV]}RM{I|L}[Q{I|L}]T;{[ET]|[MV]}R[QT]M{I|L}{I|L};{[ET]|[MV]}RM[QT]{I|L}{I|L} 4.3828;2.5174;1.5583;1.5329;1.3309;0.60946 +;-;-;-;-;- + 104 1 1.995 64420.7 1.0 5174 3708 8880 DOHH2_400M_050219_2,8884 DOHH2_400M_050219_2,8884,TQMVRMIL False True TQMVRMIL 51.272824 496.274951159954 800270.125 8880.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 4.202098369598389 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8885 51.287 800.0 64636.0 25 0 7150.1 + 29427 QLEWDDSTLSY 11 83 678.8019349618104 1355.589316990421 2 678.8009521365166 MULTI CID FTMS 0 0 0 8880 83676.9609375 1.0 0 0.0 5 Unmodified _QLEWDDSTLSY_ ENSG00000171603|ENST00000377298|CLSTN1;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;nc|ENSG00000171603|O94985-2|CLSTN1 63.960520009940105 0.0530716371881472 2 TSDN[RD]SY 8 8 38.448 0.0 0.0 2.8363 0.0 0.0 399.202805467192 0.0 399.202805467192 0.0 15.243500300354142 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 TSDN[RD]SY 2.8363 - 242 + 1 1.995 43762.8 0.3899999856948852 5175 3708 8880 DOHH2_400M_050219_2,8885 DOHH2_400M_050219_2,8885,QLEWDDSTLSY True True QLEWDDSTLSY 51.286662 678.800952136517 597666.3125 8880.0 nc|ENSG00000171603|O94985-2|CLSTN1;;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;;ENSG00000171603|ENST00000377298|CLSTN1 6.785011927286784 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8887 51.292 31.0 1585800.0 25 0 129800.0 + 25496 NELPGLKW 8 75 478.7637783642536 955.5130037953072 2 478.7637206912041 MULTI CID FTMS 0 0 0 8886 1714854.625 0.6603480155774477 2 -0.0628852844238281 1 Unmodified _NELPGLKW_ ENSG00000037474|ENST00000264670|NSUN2;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 54.773552608820026 0.1167943196628344 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG{I|L}KW 8 0 + 47.722 0.0 0.0 4.9944 4.9944 88.829 0.0 0.0 0.0 33.02942338689878 10.810935890735216 10.810935890735216 47.72216099146281 0 1.0 0.0 0.0 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG{I|L}KW 4.9944 + + 79 + 1 1.995 44658.1 1.0 5176 3709 8886 DOHH2_400M_050219_2,8887 DOHH2_400M_050219_2,8887,NELPGLKW True True NELPGLKW 51.291537 478.763720691204 28588110.0 8886.0 nc|ENSG00000037474|Q08J23-3|NSUN2;;ENSG00000037474|ENST00000264670|NSUN2;;nc|ENSG00000037474|Q08J23-2|NSUN2 6.989396413167317 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8888 51.293 36.0 1260000.0 25 0 73456.0 + 12349 GTDELRLLY 9 83 540.2902993078975 1078.566045682595 2 540.2904540896416 MULTI CID FTMS 0 0 0 8886 1419063.125 0.7011190540699195 2 -0.0628852844238281 2 Unmodified _GTDELRLLY_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 49.55428908609986 0.0413471690215031 2 {[SA]|[TG]}DE{I|L}R{I|L}{I|L}Y 9 0 + 72.145 0.0 0.0 6.689 6.689 93.511 0.0 0.0 0.0 57.68114684785509 16.478174818886373 16.478174818886373 21.760912590556813 0 1.579689690656103 1.6989700043360187 0.3494850021680094 0.0 + + {[SA]|[TG]}DE{I|L}R{I|L}{I|L}Y;{[ES]|[DT]|[{I|L}C]}GE{I|L}R{I|L}{I|L}Y;{[ES]|[DT]|[{I|L}C]}EG{I|L}R{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}]{[SA]|[TG]}{I|L}{I|L}Y 6.689;4.6714;4.3474;1.6751 +;-;-;- + 79 + 1 1.995 40913.4 1.0 5177 3709 8886 DOHH2_400M_050219_2,8888 DOHH2_400M_050219_2,8888,GTDELRLLY True True GTDELRLLY 51.292714 540.290454089642 35307405.0 8886.0 ENSG00000001497|ENST00000374811|LAS1L;;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 8.115052382151285 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8890 51.309 800.0 59861.0 25 0 15002.0 + -1 RRKADRRKRPM 11 71 743.4356371249455 1484.856721316691 2 743.4356567263603 MULTI CID FTMS 0 0 0 8889 67855.9140625 0.6517581822298065 3 -0.1157188415527343 1 Oxidation (M) _RRKADRRKRPM(Oxidation (M))_ REV__ENST00000294119.6_1_11:62444064-62444232:-|nuORF 0.3506318815782774 0.8734936314171269 2 Y 1 -1 11.109 0.0 0.0 0.74817 0.0 0.0 1303.7825311084862 0.0 1303.7825311084862 0.0 5.422881389671657 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.74817 - 17 + 1 1.995 47491.8 0.3799999952316284 5178 3710 8889 DOHH2_400M_050219_2,8890 DOHH2_400M_050219_2,8890,RRKADRRKRPM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8891 51.323 800.0 115720.0 25 0 12307.0 -1 CLCPKDKK 8 108 524.7676522427462 1047.5207515522925 2 524.7677490115166 MULTI CID FTMS 0 0 0 8889 93197.828125 1.0 0 0.0 2 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))PKDKK_ ENST00000438023.5_2_9:6757745-6757892:+|nuORF 4.75600775471527 0.7954636275367004 2 {I|L}SKVGK 6 -1 40.421 0.0 0.0 3.8587 0.0 0.0 417.1128214331847 0.0 417.1128214331847 0.0 25.36658945444961 0.0 0.0 0 1.1861818737241734 0.0 0.6861818737241735 0.2134679910804404 {I|L}SKVGK 3.8587 - 268 + 1 1.995 72975.7 0.4000000059604645 5179 3710 8889 DOHH2_400M_050219_2,8891 DOHH2_400M_050219_2,8891,CLCPKDKK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8892 51.336 736.0 117310.0 25 0 14243.0 + 24511 MIPIQVPVE 9 102 513.2868332506713 1024.5591135681425 2 513.2868530154228 MULTI CID FTMS 0 0 0 8889 113827.1796875 1.0 0 0.0 3 Unmodified _MIPIQVPVE_ REV__ENSG00000126733|ENST00000373125|DACH2;REV__nc|ENSG00000126733|Q96NX9-2|DACH2;REV__nc|ENSG00000126733|Q96NX9-3|DACH2;REV__nc|ENSG00000126733|Q96NX9-4|DACH2 16.942295170755138 0.3780752226737986 2 VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}N 7 -1 45.348 0.0 0.0 4.4261 0.0 0.0 0.0 224.10515772037343 224.10515772037343 31.14725595156408 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.6989700043360187 VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}N 4.4261 - 497 + 1 1.995 75506.5 1.0 5180 3710 8889 DOHH2_400M_050219_2,8892 DOHH2_400M_050219_2,8892,MIPIQVPVE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8893 51.35 800.0 120200.0 25 0 11005.0 -1 0 111 666.3407686407778 1996.0004765225333 3 666.6750976443291 MULTI CID FTMS 0 0 0 8889 72634.96875 0.8555598049561917 -1 0.0060539245605468 4 2 {[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}H{I|L}{M(Oxidation (M))|F}GD[VG]G[KQ]{M(Oxidation (M))|F}{M(Oxidation (M))|F}W 17 -1 + 50.726 0.0 0.0 2.5414 2.5414 79.152 0.0 0.0 0.0 32.760126390537444 4.606735886944847 4.606735886944847 16.726410656136693 0 0.0 0.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}H{I|L}{M(Oxidation (M))|F}GD[VG]G[KQ]{M(Oxidation (M))|F}{M(Oxidation (M))|F}W;[NP]{I|L}[WR][WD]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]} 2.5414;1.7034 -;- 533 + 1 1.995 81257.0 0.9800000190734864 5181 3710 8889 DOHH2_400M_050219_2,8893 DOHH2_400M_050219_2,8893, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8895 51.354 108.0 407950.0 25 0 22539.0 -1 0 70 1029.8303734242431 3086.4692908729294 3 1030.165942370892 MULTI CID FTMS 0 0 0 8894 775125.1875 0.6175534829470231 3 -0.0934600830078125 1 2 [MN]{[ET]|[MV]}{I|L}A 6 -1 36.923 0.0 0.0 1.1963 0.0 0.0 0.0 2424.124249492023 2424.124249492023 17.715299873086607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [MN]{[ET]|[MV]}{I|L}A 1.1963 - 52 + 1 1.995 41184.6 1.0 5182 3711 8894 DOHH2_400M_050219_2,8895 DOHH2_400M_050219_2,8895, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8896 51.357 144.0 260600.0 25 0 31583.0 + 45510 YTSDYFISY 9 74 579.7531624720563 1157.4917720109124 2 579.7532226443291 MULTI CID FTMS 0 0 0 8894 343418.46875 0.0869714171551897 9 -0.2559013366699219 2 Unmodified _YTSDYFISY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 23.1484247019978 0.2366544122328345 2 SY 2 7 24.222 0.0 0.0 2.0926 0.0 0.0 889.3855867121043 0.0 889.3855867121043 0.0 7.7815125038364386 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + SY 2.0926 + + 121 + 1 1.995 34920.4 1.0 5183 3711 8894 DOHH2_400M_050219_2,8896 DOHH2_400M_050219_2,8896,YTSDYFISY False True YTSDYFISY 51.357334 579.753222644329 25755928.0 8894.0 ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;nc|ENSG00000134954|P14921-2|ETS1;;nc|ENSG00000134954|P14921-5|ETS1 4.094943126042684 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8898 51.367 413.0 335310.0 25 0 14431.0 -1 0 107 1010.8110747132 3029.4113947398 3 1011.146838366985 MULTI CID FTMS 0 0 0 8897 432971.1875 0.8613314524024267 2 -0.0856666564941406 1 2 D[PS]QSAP{[{M(Oxidation (M))|F}D]|MM} 9 -1 45.098 0.0 0.0 1.4887 0.0 0.0 2067.035631830104 0.0 2067.035631830104 0.0 14.366903183326514 0.0 0.0 0 0.0 0.0 1.674742501084005 0.4247425010840047 D[PS]QSAP{[{M(Oxidation (M))|F}D]|MM} 1.4887 - 638 1 1.995 97972.5 1.0 5184 3712 8897 DOHH2_400M_050219_2,8898 DOHH2_400M_050219_2,8898, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8899 51.372 234.0 488100.0 25 0 59017.0 -1 0 72 914.4369980127864 0 914.4371826052666 PEAK CID FTMS 0 0 0 8897 360378.15625 1.0 0 0.0 2 2 Y{M(Oxidation (M))|F}ANQQAE[EP]C(Carbamidomethyl (C)) 11 -1 63.959 0.0 0.0 3.5011 0.0 0.0 358.2215144725456 128.07215295963127 486.2936674321769 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.7742275032520141 Y{M(Oxidation (M))|F}ANQQAE[EP]C(Carbamidomethyl (C)) 3.5011 - 377 + 1 1.995 79909.8 1.0 5185 3712 8897 DOHH2_400M_050219_2,8899 DOHH2_400M_050219_2,8899, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8900 51.381 516.0 266740.0 25 0 19177.0 + 4837 DFKIRTIEL 9 157 567.8300354532311 1133.645517973262 2 567.8312255740166 MULTI CID FTMS 0 0 0 8897 196168.984375 0.707068297890602 -1 0.0077934265136718 3 Unmodified _DFKIRTIEL_ ENSG00000138069|ENST00000409784|RAB1A;ENSG00000166128|ENST00000321437|RAB8B;ENSG00000167461|ENST00000300935|RAB8A;ENSG00000174903|ENST00000311481|RAB1B;ENST00000342609.6_1_2:191857981-191858245:-|nuORF;ENST00000587156.5_1_19:16222711-16238468:+|nuORF;ENST00000589697.1_1_19:16222732-16236504:+|nuORF;ENST00000590899.5_1_19:16222711-16232755:+|nuORF;nc|ENSG00000138069|P62820-3|RAB1A;nc|ENSG00000167461|P61006-2|RAB8A 59.05245873256422 0.0266066919017776 2 D{M(Oxidation (M))|F}K{I|L}{[TV]|[{I|L}S]}[W{I|L}]{I|L} 9 2 + 55.256 0.0 0.0 4.8742 4.8742 74.392 0.0 0.0 0.0 3.1106546988673145 16.328402799419166 3.1106546988673145 2.2577249674798594 0 1.1237125054200234 0.0 0.9916440611282624 0.0 D{M(Oxidation (M))|F}K{I|L}{[TV]|[{I|L}S]}[W{I|L}]{I|L};D{M(Oxidation (M))|F}{I|L}K{[TV]|[{I|L}S]}[W{I|L}]{I|L};{[QN]|[E{I|L}]|[KN]}KE{I|L}K{M(Oxidation (M))|F}D{I|L};{[QN]|[E{I|L}]|[KN]}K[K{I|L}]{M(Oxidation (M))|F}ED{I|L};{I|L}{M(Oxidation (M))|F}DK{[TV]|[{I|L}S]}[W{I|L}]{I|L};{[QN]|[E{I|L}]|[KN]}K[K{I|L}]{M(Oxidation (M))|F}DE{I|L};{I|L}{M(Oxidation (M))|F}{I|L}TR{I|L}RC{I|L};{[QN]|[E{I|L}]|[KN]}K[K{I|L}]E{M(Oxidation (M))|F}D{I|L};D{M(Oxidation (M))|F}{I|L}{I|L}[KS][W{I|L}]{I|L};{[QN]|[E{I|L}]|[KN]}NKKK{M(Oxidation (M))|F}D{I|L} 4.8742;4.6751;3.7534;3.6194;3.5398;3.4237;3.2692;3.1282;3.084;3.018 -;-;-;-;-;-;-;-;-;- 2740 + 1 1.995 104013.0 1.0 5186 3712 8897 DOHH2_400M_050219_2,8900 DOHH2_400M_050219_2,8900,DFKIRTIEL True True DFKIRTIEL 51.380795 567.831225574017 1268062.375 8897.0 nc|ENSG00000138069|P62820-3|RAB1A;;nc|ENSG00000167461|P61006-2|RAB8A;;ENSG00000174903|ENST00000311481|RAB1B;;ENST00000342609.6_1_2:191857981-191858245:-|nuORF;;ENST00000590899.5_1_19:16222711-16232755:+|nuORF;;ENST00000589697.1_1_19:16222732-16236504:+|nuORF;;ENST00000587156.5_1_19:16222711-16238468:+|nuORF;;ENSG00000138069|ENST00000409784|RAB1A;;ENSG00000166128|ENST00000321437|RAB8B;;ENSG00000167461|ENST00000300935|RAB8A 3.2216742833455405 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8901 51.395 800.0 106040.0 25 0 12136.0 + 7625 EITRIKFDI 9 109 378.8888454928075 1133.6447070786226 3 378.8886901736259 MULTI CID FTMS 0 0 0 8897 157505.5625 1.0 0 0.0 4 Unmodified _EITRIKFDI_ REV__ENSG00000166128|ENST00000321437|RAB8B;REV__ENSG00000167461|ENST00000300935|RAB8A;REV__ENST00000587156.5_1_19:16222711-16238468:+|nuORF;REV__ENST00000589697.1_1_19:16222732-16236504:+|nuORF;REV__ENST00000590899.5_1_19:16222711-16232755:+|nuORF;REV__nc|ENSG00000167461|P61006-2|RAB8A 18.1463463914782 0.3454829746528889 2 {[QN]|[E{I|L}]|[KN]}KE{I|L}KD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 -1 + 29.618 0.0 0.0 2.6126 2.6126 70.579 0.0 0.0 0.0 4.762036441594194 11.659321666741466 4.762036441594194 4.771212547196623 0 0.0 0.0 0.6307196863200843 0.0 {[QN]|[E{I|L}]|[KN]}KE{I|L}KD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}K{I|L}EKD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}K{I|L}KED{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QD]|[EN]|[WG]|[KD]|[RS]}[KQ]{I|L}KD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}K{I|L}TRD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}K{I|L}T[VG]D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.6126;2.1918;1.6568;1.4897;1.3912;0.57897 -;-;-;-;-;- 186 1 1.995 69977.4 0.9900000095367432 5187 3712 8897 DOHH2_400M_050219_2,8901 DOHH2_400M_050219_2,8901,EITRIKFDI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8902 51.408 800.0 180480.0 25 0 42142.0 + 25468 NEIVSVIWYQF 11 96 699.3563579961469 1396.6981630590938 2 699.3571044802666 MULTI CID FTMS 0 0 0 8897 103890.1796875 0.7249709230787179 -1 0.0077934265136718 5 Unmodified _NEIVSVIWYQF_ REV__ENSG00000198879|ENST00000397167|SFMBT2 24.99096001346401 0.505407273373304 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V{I|L}EDE{I|L} 9 -1 66.469 0.0 0.0 4.759 0.0 0.0 0.0 339.16720044474613 339.16720044474613 37.61645397812573 0.0 0.0 0.0 0 0.0 0.0 1.4604093769761877 1.9291746928241125 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V{I|L}EDE{I|L} 4.759 - 1376 1 1.995 108856.2 0.4300000071525574 5188 3712 8897 DOHH2_400M_050219_2,8902 DOHH2_400M_050219_2,8902,NEIVSVIWYQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8904 51.426 800.0 110470.0 25 0 8177.2 + 11219 GEPPGFLHSW 10 104 563.7689809757943 1125.5234090183883 2 563.7697631716728 MULTI CID FTMS 0 0 0 8903 88783.4765625 0.3476596369024168 7 -0.1970138549804687 1 Unmodified _GEPPGFLHSW_ ENSG00000130511|ENST00000270061|SSBP4;ENSG00000145687|ENST00000615665|SSBP2;ENSG00000157216|ENST00000610401|SSBP3;ENST00000506960.5_1_5:80911285-80946133:-|nuORF;ENST00000508912.1_1_5:80932374-80946133:-|nuORF;ENST00000589764.1_1_18:12067489-12068164:-|nuORF;ENST00000598159.6_1_19:18538161-18542842:+|nuORF;nc|ENSG00000130511|Q9BWG4-2|SSBP4;nc|ENSG00000145687|P81877-2|SSBP2;nc|ENSG00000145687|P81877-3|SSBP2;nc|ENSG00000145687|P81877-4|SSBP2;nc|ENSG00000145687|P81877-5|SSBP2;nc|ENSG00000145687|P81877|SSBP2;nc|ENSG00000157216|Q9BWW4-2|SSBP3;nc|ENSG00000157216|Q9BWW4-3|SSBP3 71.92227651296345 0.0188747003512554 2 {[DA]|[EG]}PPG{M(Oxidation (M))|F}{I|L}HSW 10 0 + 75.933 0.0 0.0 6.7464 6.7464 92.182 0.0 0.0 0.0 36.77861646447915 13.521825181113629 13.521825181113629 13.571231544599485 0 0.7302046884880937 1.3979400086720375 1.8098943791441968 0.0 + + {[DA]|[EG]}PPG{M(Oxidation (M))|F}{I|L}HSW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PP{I|L}HSW;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}SH{I|L}PPW;{[DA]|[EG]}PPG{M(Oxidation (M))|F}{I|L}HC(Carbamidomethyl (C)){I|L};{[DA]|[EG]}PPGH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Y;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}PP{I|L}HC(Carbamidomethyl (C)){I|L};{[DA]|[EG]}PPGH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L};{[DA]|[EG]}[YQ]H{I|L}PPW;{[DA]|[EG]}PPG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H{I|L}Y;{[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}SP[H{I|L}]PW 6.7464;5.5407;4.9083;4.2776;4.2386;4.0589;4.0226;3.9506;3.8601;3.8594 +;-;-;-;-;-;-;-;-;- + 866 + 1 1.995 76446.8 0.4300000071525574 5189 3713 8903 DOHH2_400M_050219_2,8904 DOHH2_400M_050219_2,8904,GEPPGFLHSW True True GEPPGFLHSW 51.426144 563.769763171673 4305205.5 8903.0 ENSG00000157216|ENST00000610401|SSBP3;;ENST00000598159.6_1_19:18538161-18542842:+|nuORF;;nc|ENSG00000145687|P81877-3|SSBP2;;nc|ENSG00000130511|Q9BWG4-2|SSBP4;;nc|ENSG00000145687|P81877-5|SSBP2;;nc|ENSG00000145687|P81877-4|SSBP2;;nc|ENSG00000145687|P81877-2|SSBP2;;nc|ENSG00000157216|Q9BWW4-3|SSBP3;;ENSG00000145687|ENST00000615665|SSBP2;;ENST00000589764.1_1_18:12067489-12068164:-|nuORF;;nc|ENSG00000145687|P81877|SSBP2;;nc|ENSG00000157216|Q9BWW4-2|SSBP3;;ENSG00000130511|ENST00000270061|SSBP4;;ENST00000508912.1_1_5:80932374-80946133:-|nuORF;;ENST00000506960.5_1_5:80911285-80946133:-|nuORF 8.086973508199057 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8905 51.43 189.0 477710.0 25 0 48954.0 + 39632 VDSLYVIYVY 10 87 617.3217431862107 1232.628933439221 2 617.3214599490166 MULTI CID FTMS 0 0 0 8903 326686.625 0.1111353732402314 -7 0.2594528198242187 2 Unmodified _VDSLYVIYVY_ REV__ENST00000356577.8_2_21:34948883-34949093:+|nuORF 34.10243960390752 0.2198439752719791 2 [VS]D{I|L}VYY{I|L}VY 10 -1 + 58.18 0.0 0.0 4.72 4.72 71.33 0.0 0.0 0.0 12.340610492820652 37.02334067560567 12.340610492820652 0.4845500650402812 0 1.6677353201839438 0.958607314841775 1.4291746928241125 0.0 [VS]D{I|L}VYY{I|L}VY;[VS]D{I|L}YYV{I|L}VY;[VS]EVVYY{I|L}VY;[VS]EVYYV{I|L}VY;[VS]DV{I|L}YY{I|L}VY;[VS]D{I|L}YY{I|L}VVY;{[TV]|[{I|L}S]}DVVYY{I|L}VY;{[TV]|[{I|L}S]}DVYYV{I|L}VY;[DP]AVGVV{[DS]|[MA]|[CV]|TT}{I|L}VY;[DP]G{I|L}GVV{[DS]|[MA]|[CV]|TT}{I|L}VY 4.72;4.6807;4.0494;4.0101;3.9101;3.769;3.6173;3.5779;3.2109;3.1323 -;-;-;-;-;-;-;-;-;- 1867 1 1.995 71247.3 1.0 5190 3713 8903 DOHH2_400M_050219_2,8905 DOHH2_400M_050219_2,8905,VDSLYVIYVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8906 51.437 415.0 193050.0 25 0 13036.0 + 32992 SENDVIRLI 9 110 529.7947809581892 1057.5750089831783 2 529.7956420779228 MULTI CID FTMS 0 0 0 8903 141748.71875 0.8141557038395704 -1 0.0510940551757812 3 Unmodified _SENDVIRLI_ ENSG00000081320|ENST00000263955|STK17B 82.5293158979368 0.0169039238599547 2 {[ES]|[DT]|[{I|L}C]}NDV{I|L}R{I|L}{I|L} 9 0 + 62.063 0.0 0.0 5.8684 5.8684 86.935 0.0 0.0 0.0 48.083362792012 12.351905544230348 12.351905544230348 9.208187539523747 0 1.524227503252014 0.0 0.0 0.4247425010840047 + + {[ES]|[DT]|[{I|L}C]}NDV{I|L}R{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}GGDV{I|L}R{I|L}{I|L};[WC(Carbamidomethyl (C))][TP]{I|L}R{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]R{I|L}{I|L};[WC(Carbamidomethyl (C))]{I|L}[TP]R{I|L}{I|L} 5.8684;4.9977;1.9476;1.875;1.6629 +;-;-;-;- + 237 + 1 1.995 64751.8 1.0 5191 3713 8903 DOHH2_400M_050219_2,8906 DOHH2_400M_050219_2,8906,SENDVIRLI True True SENDVIRLI 51.437215 529.795642077923 926666.25 8903.0 ENSG00000081320|ENST00000263955|STK17B 5.628409226735433 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8907 51.443 315.0 175640.0 25 0 15979.0 + 10290 FRPPNPWTM 9 87 573.2819630054769 1144.5493730777537 2 573.2817870974541 MULTI CID FTMS 0 0 0 8903 135219.234375 0.5718475201208131 -1 0.0510940551757812 4 Unmodified _FRPPNPWTM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 53.832793166522166 0.0319663582346103 2 [WP]T{[QV]|[N{I|L}]|[RA]|[KV]}PWTM 9 4 + 59.772 0.0 0.0 5.2223 5.2223 85.559 0.0 0.0 0.0 11.778259348524358 11.778259348524358 11.778259348524358 9.771212547196626 0 0.9247425010840048 1.3010299956639813 0.3807196863200844 0.2614393726401688 [WP]T{[QV]|[N{I|L}]|[RA]|[KV]}PWTM;[WP]T{[QV]|[N{I|L}]|[RA]|[KV]}TWPM;{M(Oxidation (M))|F}M{[SA]|[TG]}P{[QV]|[N{I|L}]|[RA]|[KV]}T[HQ];{M(Oxidation (M))|F}M[PG]T{[QV]|[N{I|L}]|[RA]|[KV]}T[HQ];{M(Oxidation (M))|F}CWP{[QV]|[N{I|L}]|[RA]|[KV]}T[HQ];{M(Oxidation (M))|F}M[WP][KA]T[HQ];[WP]T{[QV]|[N{I|L}]|[RA]|[KV]}DDRE;[WP]T[KA][HQ]{M(Oxidation (M))|F}M;[R{M(Oxidation (M))|F}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[R{M(Oxidation (M))|F}]EM;[MT][KS][HK]WPM 5.2223;4.3686;4.1932;3.9302;3.1188;2.9772;2.7761;2.5019;2.2636;1.8912 -;-;-;-;-;-;-;-;-;- 273 1 1.995 48924.5 1.0 5192 3713 8903 DOHH2_400M_050219_2,8907 DOHH2_400M_050219_2,8907,FRPPNPWTM True True FRPPNPWTM 51.442961 573.281787097454 1600970.625 8903.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 8.860227425893148 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8909 51.448 5.2 9789000.0 25 0 1024300.0 + 25457 NEIEDTFRQF 10 54 649.8041812144376 1297.593809495675 2 649.8047973513603 MULTI CID FTMS 0 0 0 8908 9463028.0 0.7951716092560289 1 -0.0059318542480468 1 Unmodified _NEIEDTFRQF_ ENSG00000128524|ENST00000249289|ATP6V1F 67.83816525789305 0.0190062514522628 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F} 7 3 53.231 0.0 0.0 4.1023 0.0 0.0 0.0 446.2164400690063 446.2164400690063 41.01296975161809 0.0 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.0 + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F} 4.1023 + + 101 + 1 1.995 45665.6 1.0 5193 3714 8908 DOHH2_400M_050219_2,8909 DOHH2_400M_050219_2,8909,NEIEDTFRQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8910 51.449 6.2 9635800.0 25 0 1119500.0 + 847 AETPDIKLF 9 83 517.2816068735767 1032.5486608139531 2 517.2817870974541 MULTI CID FTMS 0 0 0 8908 9427164.0 0.3048901761158877 -6 0.19482421875 2 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 27.22323531849824 0.1848086127304535 2 [DP]{I|L}K{I|L}T 6 4 43.65 0.0 0.0 4.2274 0.0 0.0 0.0 362.1338445151909 362.1338445151909 6.534759048170216 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.7302046884880937 0.0 [DP]{I|L}K{I|L}T 4.2274 - 245 1 1.995 51335.1 1.0 5194 3714 8908 DOHH2_400M_050219_2,8910 DOHH2_400M_050219_2,8910,AETPDIKLF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8912 51.459 447.0 188800.0 25 0 15929.0 + 29984 QTALVELLK 9 113 507.81340362474367 1013.6122543162874 2 507.8133117556572 MULTI CID FTMS 0 0 0 8911 91475.015625 0.6643421579405578 -1 0.0059318542480468 1 Unmodified _QTALVELLK_ CON__P02769 39.21299971606389 0.0797768173001226 2 [QT]A{I|L}VE{I|L}{I|L}K 9 0 + 57.893 0.0 0.0 5.7116 5.7116 87.926 0.0 0.0 0.0 13.300756084811807 10.793037728310251 10.793037728310251 10.793037728310251 0 0.2396518287104437 0.8538719643217619 0.2396518287104437 0.25 + + [QT]A{I|L}VE{I|L}{I|L}K;[QT]A{I|L}VE{I|L}K{I|L} 5.7116;4.6468 +;- + 577 + 1 1.995 69337.8 1.0 5195 3715 8911 DOHH2_400M_050219_2,8912 DOHH2_400M_050219_2,8912,QTALVELLK True True QTALVELLK 51.459411 507.813311755657 608893.9375 8911.0 P02769 6.03822135925293 2.0 True 9.0 False contaminant PXD020620_cell_line DOHH2_400M_050219_2 8913 51.473 800.0 98824.0 25 0 9596.8 + 19192 LEFIKEIGY 9 96 556.3058427071397 1110.5971324810794 2 556.3061401247978 MULTI CID FTMS 0 0 0 8911 95195.796875 1.0 0 0.0 2 Unmodified _LEFIKEIGY_ ENSG00000049541|ENST00000055077|RFC2;ENST00000485545.5_2_7:73646438-73651717:-|nuORF;nc|ENSG00000049541|P35250-2|RFC2 49.55428908609986 0.0413471690215031 2 {[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}{I|L}GY{[QN]|[E{I|L}]|[KN]} 9 5 + 54.618 0.0 0.0 4.9179 4.9179 72.246 0.0 0.0 0.0 2.695086723435409 25.44408732588998 2.695086723435409 0.5031220908418277 0 0.5 2.0 0.6307196863200843 0.0 {[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}{I|L}GY{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}K[HT]{I|L}E{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}[YG]K{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}K{I|L}GY{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}[HT]{I|L}KE{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}KGY{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}[HT]K{I|L}E{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}[HT]{I|L}EK{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}[HT]KNK{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}[HT]KGGK{[QN]|[E{I|L}]|[KN]} 4.9179;4.8726;4.8702;4.8042;4.6491;4.621;4.466;3.9279;3.7447;2.9156 -;-;-;-;-;-;-;-;-;- 1102 1 1.995 63010.9 0.4099999964237213 5196 3715 8911 DOHH2_400M_050219_2,8913 DOHH2_400M_050219_2,8913,LEFIKEIGY True True LEFIKEIGY 51.473242 556.306140124798 529512.125 8911.0 ENST00000485545.5_2_7:73646438-73651717:-|nuORF;;ENSG00000049541|ENST00000055077|RFC2;;nc|ENSG00000049541|P35250-2|RFC2 5.054793993631999 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8914 51.487 800.0 66653.0 25 0 5838.2 -1 0 65 951.9520913677836 1901.8896298023672 2 952.4554321169852 MULTI CID FTMS 0 0 0 8911 79421.3046875 1.0 0 0.0 3 2 Y{M(Oxidation (M))|F}ANQ[HD]{[YD]|[{M(Oxidation (M))|F}M]}VC(Carbamidomethyl (C)){I|L} 12 -1 51.068 0.0 0.0 2.6851 0.0 0.0 358.2153217368107 0.0 358.2153217368107 0.0 40.61033795144553 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 Y{M(Oxidation (M))|F}ANQ[HD]{[YD]|[{M(Oxidation (M))|F}M]}VC(Carbamidomethyl (C)){I|L} 2.6851 - 513 + 1 1.995 43661.6 0.3700000047683716 5197 3715 8911 DOHH2_400M_050219_2,8914 DOHH2_400M_050219_2,8914, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8915 51.501 800.0 92150.0 25 0 4683.7 -1 0 79 1023.8277661038172 3068.461468911651 3 1024.162158191204 MULTI CID FTMS 0 0 0 8911 129196.3046875 0.494551778099907 -5 0.1562232971191406 4 2 D[QP]NVN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 8 -1 34.13 0.0 0.0 1.1123 0.0 0.0 2139.015005865769 0.0 2139.015005865769 0.0 6.19325543266271 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 D[QP]NVN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.1123 - 731 1 1.995 57546.6 0.4600000083446502 5198 3715 8911 DOHH2_400M_050219_2,8915 DOHH2_400M_050219_2,8915, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8917 51.519 800.0 88990.0 25 0 5095.7 -1 0 82 1027.005427472592 2051.9963020119844 2 1027.504931628704 MULTI CID FTMS 0 0 0 8916 59865.4765625 0.5332183734642134 21 -0.6563835144042969 1 2 {[QS]|[NT]}AAPPPPP[HQ]C 12 -1 47.979 0.0 0.0 2.3381 0.0 0.0 0.0 838.4079000406686 838.4079000406686 33.24159628931732 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 1.4143943297944483 {[QS]|[NT]}AAPPPPP[HQ]C 2.3381 - 1945 1 1.995 55363.8 0.3799999952316284 5199 3716 8916 DOHH2_400M_050219_2,8917 DOHH2_400M_050219_2,8917, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8918 51.522 201.0 281670.0 25 0 63772.0 + 34060 SLLEKSLGL 9 81 480.2924520174636 958.5703511017272 2 480.2924072146416 MULTI CID FTMS 0 0 0 8916 345415.84375 0.9002295916705217 -3 0.0924453735351562 2 Unmodified _SLLEKSLGL_ ENSG00000124802|ENST00000379715|EEF1E1;nc|ENSG00000124802|O43324-2|EEF1E1 47.74868867922204 0.0453060283459952 2 {[TV]|[{I|L}S]}{I|L}GS{I|L}G{I|L}S{I|L} 10 4 + 76.419 0.0 0.0 7.9722 7.9722 87.5 0.0 0.0 0.0 20.79181246047625 62.73648852219278 20.79181246047625 5.523787536356579 0 1.1989700043360187 2.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}{I|L}GS{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}G{I|L}S{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}GS{I|L}{I|L}G{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}KS{I|L}G{I|L}S{I|L};{[VA]|[{I|L}G]}S{I|L}S{I|L}G{I|L}S{I|L};[{I|L}T]VGS{I|L}G{I|L}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}S{I|L}G{I|L}S{I|L};{[VA]|[{I|L}G]}SS{I|L}{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}GK{[QN]|[E{I|L}]|[KN]}{I|L}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}{I|L}G{I|L}S{I|L} 7.9722;7.396;6.6668;4.9775;4.9495;4.5918;4.4205;4.2204;3.7345;3.6913 -;-;-;-;-;-;-;-;-;- 382 1 1.995 51965.1 1.0 5200 3716 8916 DOHH2_400M_050219_2,8918 DOHH2_400M_050219_2,8918,SLLEKSLGL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8919 51.534 649.0 126930.0 25 0 14722.0 -1 QLCCWMLLFS 10 94 630.2852176494536 1258.555882365707 2 630.2858154177666 MULTI CID FTMS 0 0 0 8916 146300.75 1.0 0 0.0 3 Oxidation (M) _QLCCWM(Oxidation (M))LLFS_ nc|ENSG00000134882|Q8NBM4-2|UBAC2 13.90604991867851 0.6142120002215601 2 T{I|L}A{I|L}Y 5 -1 27.391 0.0 0.0 2.1764 0.0 0.0 679.2316151349625 0.0 679.2316151349625 0.0 6.4215905896025305 0.0 0.0 0 0.3935078169319297 0.0 0.4247425010840047 0.0 T{I|L}A{I|L}Y 2.1764 - 190 1 1.995 70323.5 1.0 5201 3716 8916 DOHH2_400M_050219_2,8919 DOHH2_400M_050219_2,8919,QLCCWMLLFS False False False False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 8921 51.538 33.0 1609800.0 25 0 289140.0 + + 15017 RADPEAGLLLY 11 38 609.3299604623642 1216.6453679915282 2 609.3300048708916 MULTI CID FTMS 0 0 0 8920 1686194.375 0.6698274062493731 4 -0.1436347961425781 1 Unmodified _ILSPFLDHIY_ nc|ENSG00000138346|P51530-3|DNA2;ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2;nc|ENSG00000138346|P51530-2|DNA2 15.847184025352805 0.5816416552707754 2 G{I|L}{I|L}{I|L}Y 5 -1 47.206 0.0 0.0 3.88 0.0 0.0 639.2968617169937 0.0 639.2968617169937 0.0 31.00833760139686 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 G{I|L}{I|L}{I|L}Y 3.88 - 19 1 1.995 46081.2 1.0 5202 3717 8920 DOHH2_400M_050219_2,8921 DOHH2_400M_050219_2,8921,ILSPFLDHIY False False RADPEAGLLLY 51.538375 609.330004870892 32671598.0 8920.0 nc|ENSG00000138346|P51530-3|DNA2;;ENSG00000138346|ENST00000358410|DNA2;;nc|ENSG00000138346|P51530-4|DNA2;;nc|ENSG00000138346|P51530-2|DNA2 8.370190302530924 2.0 False 11.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8922 51.544 330.0 174800.0 25 0 11311.0 -1 0 85 881.412242313419 1760.809931693638 2 881.9109985232353 MULTI CID FTMS 0 0 0 8920 183625.796875 0.0136305957110482 34 -0.9410438537597656 2 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQENA{M(Oxidation (M))|F}YE[{I|L}P] 15 -1 + 90.372 0.0 0.0 5.1324 5.1324 76.533 0.0 0.0 0.0 3.0102999566398125 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.0 1.3979400086720375 0.8494850021680094 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQENA{M(Oxidation (M))|F}YE[{I|L}P];[KT]KY{M(Oxidation (M))|F}ANEQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ANEQA[CS]C(Carbamidomethyl (C))V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQDQA{M(Oxidation (M))|F}YE[{I|L}P];[KT]KY{M(Oxidation (M))|F}ADQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}AQDQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}AQDQA[CS]C(Carbamidomethyl (C))V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]ENA{M(Oxidation (M))|F}YE[{I|L}P] 5.1324;4.9614;4.9614;4.9614;4.8614;4.7905;4.7905;4.6905;4.6905;4.6195 -;-;-;-;-;-;-;-;-;- 3398 1 1.995 48074.9 1.0 5203 3717 8920 DOHH2_400M_050219_2,8922 DOHH2_400M_050219_2,8922, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8923 51.548 191.0 263980.0 25 0 18296.0 + -1 VSDYWMRVAI 10 67 628.3126343143251 1254.6107156954502 2 628.3129150271416 MULTI CID FTMS 0 0 0 8920 315209.8125 1.0 0 0.0 3 Oxidation (M) _VSDYWM(Oxidation (M))RVAI_ REV__ENST00000586299.1_1_17:76672425-76672650:-|nuORF 16.149105407346934 0.5765757077271437 2 VSD{I|L}VG[DP][YK]Y 11 -1 + 63.95 0.0 0.0 5.0972 5.0972 87.265 0.0 0.0 0.0 33.77236997459274 5.100232283308337 5.100232283308337 17.992953198672268 0 1.2302046884880935 1.0969100130080565 0.0 0.0 VSD{I|L}VG[DP][YK]Y;[VS]D{I|L}[{I|L}T][C(Carbamidomethyl (C))S]VVY;WD{I|L}R[DP][YK]Y;WD{I|L}[DP]R[YK]Y;[VS]EV[{I|L}T][C(Carbamidomethyl (C))S]VVY;WD{I|L}[DP][{I|L}T]{I|L}D[PA];{[TV]|[{I|L}S]}DV[{I|L}T][C(Carbamidomethyl (C))S]VVY;WD{I|L}[DP][{I|L}T]VE[PA] 5.0972;3.663;3.1781;2.7978;2.5762;1.5714;1.3665;1.1866 -;-;-;-;-;-;-;- 169 + 1 1.995 45127.3 1.0 5204 3717 8920 DOHH2_400M_050219_2,8923 DOHH2_400M_050219_2,8923,VSDYWMRVAI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8924 51.552 183.0 234930.0 25 0 25310.0 6629 EASSGLFDVF 10 62 536.2552718391844 1070.495990745169 2 536.2552368044853 MULTI CID FTMS 0 0 0 8920 291339.59375 1.0 0 0.0 4 Unmodified _EASSGLFDVF_ ENSG00000164362|ENST00000310581|TERT;nc|ENSG00000164362|O14746-3|TERT 10.073929032068715 0.6785112666868882 2 G 1 9 3.0989 0.0 0.0 0.28949 0.0 0.0 544.2515582273937 466.1904390924438 1010.4419973198376 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 0.28949 + + 10 + 1 1.995 39181.5 1.0 5205 3717 8920 DOHH2_400M_050219_2,8924 DOHH2_400M_050219_2,8924,EASSGLFDVF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8926 51.568 800.0 106920.0 25 0 8711.8 -1 VSEVVKDAYDM 11 79 636.2952190043442 1270.5758850754885 2 636.2954589724541 MULTI CID FTMS 0 0 0 8925 107724.9140625 0.4256821236704369 -1 0.0178718566894531 1 Oxidation (M) _VSEVVKDAYDM(Oxidation (M))_ ENSG00000005882|ENST00000503176|PDK2;nc|ENSG00000005882|Q15119-2|PDK2 20.580933911654288 0.6070398941446662 2 VSD{I|L}V 5 -1 49.034 0.0 0.0 3.8592 0.0 0.0 0.0 754.2808302598442 754.2808302598442 17.26280941356464 0.0 0.0 0.0 0 1.1861818737241734 1.0457574905606752 0.3807196863200844 0.0 VSD{I|L}V 3.8592 - 65 + 1 1.995 70723.5 0.6499999761581421 5206 3718 8925 DOHH2_400M_050219_2,8926 DOHH2_400M_050219_2,8926,VSEVVKDAYDM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8927 51.578 563.0 165770.0 25 0 12022.0 + 12350 GTDELRLLY 9 131 540.2902993078975 1078.566045682595 2 540.2909423708916 MULTI CID FTMS 0 0 0 8925 126114.640625 0.0623096858635995 11 -0.3807754516601562 2 Unmodified _GTDELRLLY_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-4|LAS1L 89.40071534611396 0.0152361884002446 2 {[SA]|[TG]}DE{I|L}R{I|L}{I|L}Y 9 0 + 74.688 0.0 0.0 6.9248 6.9248 94.336 0.0 0.0 0.0 3.5083376013968604 3.5083376013968604 3.5083376013968604 22.38077002415531 0 2.2302046884880937 1.5228787452803376 0.3054621874040891 0.0 + + {[SA]|[TG]}DE{I|L}R{I|L}{I|L}Y;{[ES]|[DT]|[{I|L}C]}GE{I|L}R{I|L}{I|L}Y;{[ES]|[DT]|[{I|L}C]}EG{I|L}R{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TG{I|L}R{I|L}{I|L}Y;{[ET]|[MV]}DG{I|L}R{I|L}{I|L}Y;{I|L}{I|L}[DG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L}Y;[QA][C(Carbamidomethyl (C))R]R{I|L}{I|L}Y;{[CT]|[{M(Oxidation (M))|F}G]}[HV][KC]{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}]{[SA]|[TG]}{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}]{I|L}{[SA]|[TG]}{I|L}Y 6.9248;4.8497;3.9613;3.157;2.6872;2.293;1.9344;1.7992;1.7308;1.7308 +;-;-;-;-;-;-;-;-;- + 491 + 1 1.995 75363.7 1.0 5207 3718 8925 DOHH2_400M_050219_2,8927 DOHH2_400M_050219_2,8927,GTDELRLLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8928 51.588 577.0 68120.0 25 0 6188.1 + 39774 VEPIVPRRADP 11 60 624.856156458306 1247.697759983412 2 625.3586303591728 MULTI CID FTMS 0 0 0 8925 153866.53125 1.0 0 0.0 3 Unmodified _VEPIVPRRADP_ REV__ENSG00000133958|ENST00000695012|UNC79;REV__nc|ENSG00000133958|Q9P2D8-2|UNC79;REV__nc|ENSG00000133958|Q9P2D8-3|UNC79;REV__nc|ENSG00000133958|Q9P2D8|UNC79 5.296884461304476 0.8501568894076437 2 Y 1 -1 13.979 0.0 0.0 1.1204 0.0 0.0 1066.623279858215 0.0 1066.623279858215 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1204 - 43 + 1 1.995 34698.4 1.0 5208 3718 8925 DOHH2_400M_050219_2,8928 DOHH2_400M_050219_2,8928,VEPIVPRRADP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8929 51.602 800.0 80851.0 25 0 18083.0 -1 0 75 1082.5240243285398 3244.55024358582 3 1082.858935534954 MULTI CID FTMS 0 0 0 8925 86875.1875 1.0 0 0.0 4 2 {M(Oxidation (M))|F}{I|L}K{[CP]|[EA]}T 6 -1 8.9896 0.0 0.0 0.27707 0.0 0.0 2230.0110722985137 322.14081751041255 2552.151889808926 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 {M(Oxidation (M))|F}{I|L}K{[CP]|[EA]}T 0.27707 - 179 + 1 1.995 48325.7 0.3899999856948852 5209 3718 8925 DOHH2_400M_050219_2,8929 DOHH2_400M_050219_2,8929, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8932 51.622 800.0 123970.0 25 0 6025.6 -1 0 117 1029.8303734242431 3086.4692908729294 3 1030.499072253704 MULTI CID FTMS 0 0 0 8931 155841.15625 0.1406365518761516 12 -0.3838920593261719 1 2 [NP]{I|L}DW 5 -1 19.208 0.0 0.0 0.62234 0.0 0.0 0.0 2458.167859308109 2458.167859308109 -0.6214741040881613 0.0 -0.6214741040881613 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}DW 0.62234 - 988 1 1.995 69888.7 0.7599999904632568 5210 3720 8931 DOHH2_400M_050219_2,8932 DOHH2_400M_050219_2,8932, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8933 51.636 800.0 56338.0 25 0 3363.7 -1 0 63 1004.8083887615848 3011.403336884954 3 1005.475451648235 MULTI CID FTMS 0 0 0 8931 88452.828125 0.8517409780941144 -2 0.0539894104003906 2 2 [MN][YG]H 5 -1 32.275 0.0 0.0 1.0718 0.0 0.0 0.0 2406.1060634335145 2406.1060634335145 19.08748409920328 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 [MN][YG]H 1.0718 - 34 + 1 1.995 38479.9 0.5099999904632568 5211 3720 8931 DOHH2_400M_050219_2,8933 DOHH2_400M_050219_2,8933, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8934 51.65 800.0 97357.0 25 0 9726.8 + 6634 EATLESLCRR 10 106 589.3031287551644 1176.591704577129 2 589.3032104372978 MULTI CID FTMS 0 0 0 8931 89516.4609375 0.7398033128132053 -2 0.0539894104003906 3 Unmodified _EATLESLCRR_ REV__ENST00000502704.2_1_6:17987751-17987850:-|nuORF 22.736283301280096 0.4578556481593033 2 {[MS]|[{M(Oxidation (M))|F}A]}H{M(Oxidation (M))|F}{I|L}PDA{I|L}{M(Oxidation (M))|F} 10 -1 + 41.891 0.0 0.0 3.5604 3.5604 71.508 0.0 0.0 0.0 23.9840322369416 3.784662272473568 3.784662272473568 3.568589427416512 0 0.0 0.0 0.4247425010840047 0.0 {[MS]|[{M(Oxidation (M))|F}A]}H{M(Oxidation (M))|F}{I|L}PDA{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}HPD{I|L}[HV]{I|L}{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}H{M(Oxidation (M))|F}P{I|L}DA{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}T[WK]P{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F};{[CP]|[EA]}T[{M(Oxidation (M))|F}T]{I|L}[HV]{I|L}{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}H{M(Oxidation (M))|F}{I|L}P{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F};{[CP]|[EA]}Y[VS]{I|L}[HV]{I|L}{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}H{M(Oxidation (M))|F}P{I|L}{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F};{[CP]|[EA]}H[YV]{I|L}{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F};[YE][R{I|L}]{I|L}{M(Oxidation (M))|F}H{[CP]|[EA]} 3.5604;3.2571;2.899;2.6505;2.6267;1.9906;1.4726;1.3292;1.2818;1.1541 -;-;-;-;-;-;-;-;-;- 287 + 1 1.995 60857.6 0.5099999904632568 5212 3720 8931 DOHH2_400M_050219_2,8934 DOHH2_400M_050219_2,8934,EATLESLCRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8935 51.663 800.0 124950.0 25 0 11509.0 + 25155 MRHHFSWFWFF 11 80 814.3721266776294 1626.7297004220586 2 814.3703491091728 MULTI CID FTMS 0 0 0 8931 102760.0234375 1.0 0 0.0 4 Unmodified _MRHHFSWFWFF_ REV__nc|ENSG00000181264|Q6ZRR5-3|TLCD5;REV__nc|ENSG00000181264|Q6ZRR5-4|TLCD5 0.3506318815782774 0.8734936314171269 2 TPD{I|L}K{I|L}{M(Oxidation (M))|F} 7 -1 37.912 0.0 0.0 2.3306 0.0 0.0 794.2584976735743 0.0 794.2584976735743 0.0 3.012298196444256 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 TPD{I|L}K{I|L}{M(Oxidation (M))|F} 2.3306 - 513 + 1 1.995 73710.1 0.5199999809265137 5213 3720 8931 DOHH2_400M_050219_2,8935 DOHH2_400M_050219_2,8935,MRHHFSWFWFF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8936 51.677 800.0 121230.0 25 0 19135.0 + + -1 ASDYFDQLY 9 116 561.2464608654282 1120.4783687976562 2 561.2493774294853 MULTI CID FTMS 0 0 0 8931 99554.984375 0.8195549616949398 -1 0.0039138793945312 5 Carbamidomethyl (C) _VPDPEC(Carbamidomethyl (C))ELY_ nc|ENSG00000172053|P47897-2|QARS1;ENSG00000172053|ENST00000306125|QARS1;ENST00000478561.5_1_3:49137386-49138086:-|nuORF 7.910154910731844 0.6385446671287552 2 {[SA]|[TG]}DY{M(Oxidation (M))|F}DQ{I|L}Y 9 -1 + 31.075 0.0 0.0 2.7734 2.7734 73.263 0.0 0.0 0.0 6.741464206109864 8.116582843471306 6.741464206109864 6.741464206109864 0 0.7429928190999391 0.744727494896694 0.2887254899964357 0.0 {[SA]|[TG]}DY{M(Oxidation (M))|F}DQ{I|L}Y;{[ES]|[DT]|[{I|L}C]}GY{M(Oxidation (M))|F}DQ{I|L}Y;{[SA]|[TG]}DY{M(Oxidation (M))|F}D[AG]{I|L}Y;{[ES]|[DT]|[{I|L}C]}GY{M(Oxidation (M))|F}D[AG]{I|L}Y;{[{M(Oxidation (M))|F}D]|MM}{[CA]|SS}{M(Oxidation (M))|F}DQ{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{[YC]|[HE]}{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}{[SA]|[TG]}{M(Oxidation (M))|F}DQ{I|L}Y;{[{M(Oxidation (M))|F}D]|MM}Y{[SA]|[TG]}DQ{I|L}Y;{[SA]|[TG]}D{[WT]|[RM]}{[YC]|[HE]}{I|L}Y;[Y{M(Oxidation (M))|F}]D{[SA]|[TG]}DQ{I|L}Y 2.7734;2.1717;1.9516;1.3499;1.3425;1.1419;1.0701;0.98738;0.92698;0.74867 -;-;-;-;-;-;-;-;-;- 217 1 1.995 78251.3 0.5299999713897705 5214 3720 8931 DOHH2_400M_050219_2,8936 DOHH2_400M_050219_2,8936,VPDPECELY False False ASDYFDQLY 51.677212 561.249377429485 710383.875 8931.0 nc|ENSG00000172053|P47897-2|QARS1;;ENSG00000172053|ENST00000306125|QARS1;;ENST00000478561.5_1_3:49137386-49138086:-|nuORF 5.451834996541341 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8938 51.695 800.0 146890.0 25 0 16858.0 -1 0 80 914.4369980127864 0 914.4371215701104 PEAK CID FTMS 0 0 0 8937 119894.71875 0.3326914150335658 9 -0.2590751647949219 1 2 VQY{M(Oxidation (M))|F}ANQQAED 11 -1 92.626 0.0 0.0 5.0702 0.0 0.0 131.09760328881958 399.1794527643188 530.2770560531384 0.0 0.0 0.0 0.0 0 1.3539171939081172 0.0 0.0 1.610924374808178 VQY{M(Oxidation (M))|F}ANQQAED 5.0702 - 1536 + 1 1.995 83704.9 0.4900000095367431 5215 3721 8937 DOHH2_400M_050219_2,8938 DOHH2_400M_050219_2,8938, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8939 51.709 800.0 155700.0 25 0 27219.0 13502 HMIKKRRRWWF 11 89 822.464203339475 1642.91385374575 2 822.4643432497978 MULTI CID FTMS 0 0 0 8937 120547.0078125 1.0 0 0.0 2 Unmodified _HMIKKRRRWWF_ ENST00000229634.13_1_6:126136448-126199430:+|nuORF 0.0 0.8751479354844584 2 {[CP]|[EA]}T[DP]{I|L}K{I|L}{M(Oxidation (M))|F} 9 10 22.145 0.0 0.0 1.3479 0.0 0.0 0.0 625.342982837495 625.342982837495 4.455547018128673 0.0 0.0 0.0 0 0.0 0.0 1.079689690656103 0.0 {[CP]|[EA]}T[DP]{I|L}K{I|L}{M(Oxidation (M))|F} 1.3479 - 157 1 1.995 89983.5 0.4600000083446502 5216 3721 8937 DOHH2_400M_050219_2,8939 DOHH2_400M_050219_2,8939,HMIKKRRRWWF False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 8941 51.714 3.0 15366000.0 25 0 1446400.0 + 848 AETPDIKLF 9 70 517.2816068735767 1032.5486608139531 2 517.2823364138603 MULTI CID FTMS 0 0 0 8940 17317216.0 0.5600675914916584 2 -0.1067581176757812 1 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 24.881564428377168 0.2146028316269493 2 {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F} 9 0 + 44.039 0.0 0.0 4.2651 4.2651 85.32 0.0 0.0 0.0 -2.635832143886887 2.0395587027095985 -2.635832143886887 32.71775040875461 0 0.9247425010840048 0.0 0.0 0.0 + + {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}AAK{I|L}{M(Oxidation (M))|F};[K{I|L}]{NN|[MP]|[D{I|L}]|[EV]}[YV][WP] 4.2651;1.0964;0.037903 +;-;- + 136 + 1 1.995 42864.6 1.0 5217 3722 8940 DOHH2_400M_050219_2,8941 DOHH2_400M_050219_2,8941,AETPDIKLF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8942 51.715 29.0 1690700.0 25 0 155060.0 + 39633 VDSLYVIYVY 10 73 617.3217431862107 1232.628933439221 2 617.3217651247978 MULTI CID FTMS 0 0 0 8940 1757611.0 0.5979208805874325 2 -0.1067581176757812 2 Unmodified _VDSLYVIYVY_ REV__ENST00000356577.8_2_21:34948883-34949093:+|nuORF 26.88365393820708 0.3646707531412818 2 {NN|[MP]|[D{I|L}]|[EV]}SVVYY{I|L}VY 10 -1 + 51.533 0.0 0.0 4.1807 4.1807 71.447 0.0 0.0 0.0 2.060020049002574 11.20506544868192 2.060020049002574 2.060020049002574 0 1.3182503180159344 1.5228787452803376 1.1237125054200234 0.0 {NN|[MP]|[D{I|L}]|[EV]}SVVYY{I|L}VY;[VS]D{I|L}VYY{I|L}VY;[VS]DV{I|L}YY{I|L}VY;[VS]EVVYY{I|L}VY;{[TV]|[{I|L}S]}DVVYY{I|L}VY;{NN|[MP]|[D{I|L}]|[EV]}[TA]{I|L}YY{I|L}VY 4.1807;4.0136;3.6115;3.3626;3.2908;2.8887 -;-;-;-;-;- 524 1 1.995 40837.9 1.0 5218 3722 8940 DOHH2_400M_050219_2,8942 DOHH2_400M_050219_2,8942,VDSLYVIYVY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8943 51.716 50.0 1167700.0 25 0 108740.0 + 25458 NEIEDTFRQF 10 68 649.8041812144376 1297.593809495675 2 649.8042480349541 MULTI CID FTMS 0 0 0 8940 1088350.25 0.0914533085738202 9 -0.2715377807617187 3 Unmodified _NEIEDTFRQF_ ENSG00000128524|ENST00000249289|ATP6V1F 61.08992128646608 0.0337271188422265 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}R{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 10 0 + 70.495 0.0 0.0 5.4327 5.4327 89.75 0.0 0.0 0.0 59.69782205064881 2.7545373444029053 2.7545373444029053 30.873952292857 0 1.5 0.0 0.7614393726401688 0.8494850021680094 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}R{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ED[RP]DD[VP];[RH][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]T{M(Oxidation (M))|F}R{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.4327;3.0534;1.3188 +;-;- + 174 + 1 1.995 49456.6 1.0 5219 3722 8940 DOHH2_400M_050219_2,8943 DOHH2_400M_050219_2,8943,NEIEDTFRQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8944 51.73 800.0 145590.0 25 0 11799.0 + 30434 RDIFSILIEL 10 87 406.9085187193263 1217.7037267581788 3 406.9084655642509 MULTI CID FTMS 0 0 0 8940 96525.75 0.489836891196492 -3 0.107269287109375 4 Unmodified _RDIFSILIEL_ REV__ENSG00000084710|ENST00000403714|EFR3B;REV__nc|ENSG00000084710|Q9Y2G0-2|EFR3B;REV__nc|ENSG00000084710|Q9Y2G0-3|EFR3B 22.736283301280096 0.4578556481593033 2 {I|L}E{I|L} 3 -1 26.995 0.0 0.0 2.2169 0.0 0.0 844.4830593978942 0.0 844.4830593978942 0.0 14.01400540781544 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}E{I|L} 2.2169 + + 90 1 1.995 100031.1 0.9100000262260436 5220 3722 8940 DOHH2_400M_050219_2,8944 DOHH2_400M_050219_2,8944,RDIFSILIEL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8945 51.744 800.0 110520.0 25 0 13151.0 + -1 DFYEKMYTL 9 110 604.3669008454932 1206.7192487577863 2 604.8683349490166 MULTI CID FTMS 0 0 0 8940 89068.5859375 0.8409961287314809 -3 0.107269287109375 5 Oxidation (M) _M(Oxidation (M))KKKKMLATL_ ENSG00000174206|ENST00000398055|KICS2 3.944395688203298 0.708391353636983 2 [YE]KMYT{I|L} 7 -1 40.296 0.0 0.0 3.3393 0.0 0.0 0.0 275.25791998264884 275.25791998264884 27.196917458921703 0.0 0.0 0.0 0 0.0 1.154901959985743 0.6307196863200843 0.0 [YE]KMYT{I|L} 3.3393 - 536 1 1.995 69088.6 0.4000000059604645 5221 3722 8940 DOHH2_400M_050219_2,8945 DOHH2_400M_050219_2,8945,MKKKKMLATL False False DFYEKMYTL 51.743757 604.3673 510865.0 8940.0 ENSG00000174206|ENST00000398055|KICS2 6.8951083819071455 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8947 51.761 800.0 39814.0 25 0 2019.9 -1 0 60 1023.8277661038172 3068.461468911651 3 1024.162524402142 MULTI CID FTMS 0 0 0 8946 38673.875 0.1480400983102889 3 -0.143646240234375 1 2 [NP]{I|L} 3 -1 7.4473 0.0 0.0 0.2427 0.0 0.0 0.0 2741.258776611123 2741.258776611123 0.4575749056067497 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L} 0.2427 - 43 1 1.995 33489.2 0.4300000071525574 5222 3723 8946 DOHH2_400M_050219_2,8947 DOHH2_400M_050219_2,8947, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8948 51.775 800.0 128130.0 25 0 16334.0 + 33711 QIDEIKDPSGLFY 13 107 762.8828116586519 1523.7510703841035 2 762.8822509646416 MULTI CID FTMS 0 0 0 8946 91449.0078125 0.3291422188974718 -2 0.0665321350097656 2 Unmodified _SKRSYFLQWFY_ nc|ENSG00000075089|Q9GZN1-2|ACTR6;ENST00000550813.5_1_12:100594629-100599999:+|nuORF;ENST00000551440.1_1_12:100594629-100598862:+|nuORF;ENSG00000075089|ENST00000188312|ACTR6 13.042465956692816 0.7638483625850725 2 [Q{I|L}]DQ{I|L}{M(Oxidation (M))|F}PE[QP]T 11 10 81.29 0.0 0.0 5.3349 0.0 0.0 0.0 224.0554349226092 224.0554349226092 45.63319592526734 0.0 0.0 0.0 0 1.8252574989159955 2.0 1.086696871556164 2.4916440611282624 [Q{I|L}]DQ{I|L}{M(Oxidation (M))|F}PE[QP]T 5.3349 - 6775 1 1.995 76187.1 0.4000000059604645 5223 3723 8946 DOHH2_400M_050219_2,8948 DOHH2_400M_050219_2,8948,SKRSYFLQWFY False False QIDEIKDPSGLFY 51.775334 762.882250964642 1453993.25 8946.0 nc|ENSG00000075089|Q9GZN1-2|ACTR6;;ENST00000550813.5_1_12:100594629-100599999:+|nuORF;;ENST00000551440.1_1_12:100594629-100598862:+|nuORF;;ENSG00000075089|ENST00000188312|ACTR6 8.082611719767252 2.0 False 13.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8949 51.788 725.0 129980.0 25 0 28321.0 + 18538 KYVKYVVL 8 77 506.3133437469599 1010.6121345607198 2 506.3137695193291 MULTI CID FTMS 0 0 0 8946 90338.7109375 0.4711702224671741 -2 0.0665321350097656 3 Unmodified _KYVKYVVL_ REV__ENSG00000168824|ENST00000621129|NSG1;REV__nc|ENSG00000168824|P42857-2|NSG1 18.13498045792455 0.6430038125133779 2 [{I|L}V]C(Carbamidomethyl (C))[{I|L}P]VVV{I|L} 9 -1 + 50.92 0.0 0.0 5.0385 5.0385 79.83 0.0 0.0 0.0 6.26628182818699 16.478174818886373 6.26628182818699 6.26628182818699 0 0.9247425010840048 1.3010299956639813 0.0 0.0 [{I|L}V]C(Carbamidomethyl (C))[{I|L}P]VVV{I|L};[YK][YK]VVV{I|L};[{I|L}V][CG][{I|L}P]VVV{I|L} 5.0385;4.4185;4.1274 -;-;- 62 1 1.995 75048.6 1.0 5224 3723 8946 DOHH2_400M_050219_2,8949 DOHH2_400M_050219_2,8949,KYVKYVVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 8950 51.802 800.0 152520.0 25 0 15953.0 + 460 AEFQSIPRVF 10 108 597.3191918136458 1192.6238306940916 2 597.3193237185478 MULTI CID FTMS 0 0 0 8946 88662.8203125 0.4436845088016449 -5 0.1922950744628906 4 Unmodified _AEFQSIPRVF_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 79.59630418116434 0.0173986606250113 2 {[CP]|[EA]}{M(Oxidation (M))|F}QS{I|L}P[RV]{M(Oxidation (M))|F} 10 0 + 70.979 0.0 0.0 5.9515 5.9515 86.336 0.0 0.0 0.0 42.053819254396814 5.88599303722674 5.88599303722674 9.164539485499256 0 1.3807196863200843 0.0 0.805462187404089 1.274227503252014 + + {[CP]|[EA]}{M(Oxidation (M))|F}QS{I|L}P[RV]{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}[AG]S{I|L}P[RV]{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][KA]E{M(Oxidation (M))|F}[QA];[RP]{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}E{M(Oxidation (M))|F}[QA] 5.9515;5.1831;1.3585;1.1125 +;-;-;- + 230 + 1 1.995 92926.7 0.9300000071525574 5225 3723 8946 DOHH2_400M_050219_2,8950 DOHH2_400M_050219_2,8950,AEFQSIPRVF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8951 51.816 800.0 105030.0 25 0 7798.6 + 806 AESPPRFYF 9 90 557.2720376576842 1112.5295223821684 2 557.2710449099541 MULTI CID FTMS 0 0 0 8946 81673.953125 0.7915154189397992 -1 0.0349502563476562 5 Unmodified _AESPPRFYF_ ENSG00000115232|ENST00000397033|ITGA4;ENST00000476824.1_1_2:182363351-182392165:+|nuORF 30.63653989081413 0.1413794767160703 2 {[CP]|[EA]}SPP 5 4 31.466 0.0 0.0 2.8283 0.0 0.0 0.0 628.2891329400999 628.2891329400999 17.284700126913393 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {[CP]|[EA]}SPP 2.8283 + + 277 + 1 1.995 67975.9 0.3799999952316284 5226 3723 8946 DOHH2_400M_050219_2,8951 DOHH2_400M_050219_2,8951,AESPPRFYF False True AESPPRFYF 51.815555 557.271044909954 822881.625 8946.0 ENST00000476824.1_1_2:182363351-182392165:+|nuORF;;ENSG00000115232|ENST00000397033|ITGA4 6.242644627888997 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8953 51.832 800.0 66259.0 25 0 10634.0 + 34061 SLLEKSLGL 9 93 480.2924520174636 958.5703511017272 2 480.2919494509697 MULTI CID FTMS 0 0 0 8952 67408.078125 0.1756802640752155 5 -0.1166725158691406 1 Unmodified _SLLEKSLGL_ ENSG00000124802|ENST00000379715|EEF1E1;nc|ENSG00000124802|O43324-2|EEF1E1 53.832793166522166 0.0319663582346103 2 {[TV]|[{I|L}S]}{I|L}EK{[TV]|[{I|L}S]}G{I|L} 9 0 + 62.546 0.0 0.0 6.5249 6.5249 94.658 0.0 0.0 0.0 31.145422560880256 7.853350071374621 7.853350071374621 62.54608767593865 0 1.424742501084005 2.0 0.9247425010840048 0.0 + + {[TV]|[{I|L}S]}{I|L}EK{[TV]|[{I|L}S]}G{I|L} 6.5249 + + 206 + 1 1.995 46264.4 0.3799999952316284 5227 3724 8952 DOHH2_400M_050219_2,8953 DOHH2_400M_050219_2,8953,SLLEKSLGL True True SLLEKSLGL 51.831921 480.29194945097 4381906.0 8952.0 ENSG00000124802|ENST00000379715|EEF1E1;;nc|ENSG00000124802|O43324-2|EEF1E1 3.486189047495524 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8954 51.836 211.0 708410.0 25 0 85169.0 + 4809 DEQTPIHISW 10 122 613.2960206139124 1224.5774882946248 2 613.2961303591728 MULTI CID FTMS 0 0 0 8952 337859.65625 0.118480753082612 -9 0.3666229248046875 2 Unmodified _DEQTPIHISW_ ENSG00000100526|ENST00000335183|CDKN3 86.33184430468982 0.0118786207050641 2 [H{I|L}]PPD{I|L}S{[CT]|[{M(Oxidation (M))|F}G]}G{[DA]|[EG]} 12 11 + 45.134 0.0 0.0 3.6856 3.6856 69.545 0.0 0.0 0.0 4.409226860923141 7.562893943202624 4.409226860923141 1.840601887269564 0 0.2614393726401688 1.0 1.6989700043360187 0.0 [H{I|L}]PPD{I|L}S{[CT]|[{M(Oxidation (M))|F}G]}G{[DA]|[EG]};[H{I|L}]PPD{I|L}[YQ]G{[DA]|[EG]};[H{I|L}]P{I|L}ST[WE]G{[DA]|[EG]};[H{I|L}]P{I|L}SW{[ET]|[MV]}G{[DA]|[EG]};[H{I|L}]P{I|L}S{[DA]|[EG]}{[ET]|[MV]}GW;{[CT]|[{M(Oxidation (M))|F}G]}S{I|L}H{I|L}P[DP]G{[DA]|[EG]};[H{I|L}]PTVT[WE]G{[DA]|[EG]};[H{I|L}]PTVW{[ET]|[MV]}G{[DA]|[EG]};[H{I|L}]PTV{[DA]|[EG]}{[ET]|[MV]}GW;[H{I|L}]P{I|L}[DP]S{[CT]|[{M(Oxidation (M))|F}G]}G{[DA]|[EG]} 3.6856;3.5353;3.0875;3.0875;3.0875;2.9165;2.9063;2.9063;2.9063;2.8732 -;-;-;-;-;-;-;-;-;- 1180 1 1.995 111345.2 1.0 5228 3724 8952 DOHH2_400M_050219_2,8954 DOHH2_400M_050219_2,8954,DEQTPIHISW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8955 51.842 332.0 132690.0 25 0 7597.5 -1 0 84 881.412242313419 1760.809931693638 2 881.9126464724541 MULTI CID FTMS 0 0 0 8952 163900.796875 0.0121664032883275 41 -0.8757514953613281 3 2 Y{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L} 12 -1 63.714 0.0 0.0 3.6185 0.0 0.0 357.2310816810396 0.0 357.2310816810396 0.0 53.25679128336553 0.0 0.0 0 0.0 0.0 1.1421590589602533 0.0 Y{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L} 3.6185 - 1136 + 1 1.995 33818.9 1.0 5229 3724 8952 DOHH2_400M_050219_2,8955 DOHH2_400M_050219_2,8955, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8957 51.86 800.0 65803.0 25 0 5885.1 + 37994 TNMLKVVAL 9 98 494.7973914563308 987.5802299794616 2 494.7967101931572 MULTI CID FTMS 0 0 0 8956 69998.1171875 0.7841046338767342 1 -0.0454139709472656 1 Unmodified _TNMLKVVAL_ ENSG00000116830|ENST00000369466|TTF2;ENST00000463696.1_1_1:117637951-117640053:+|nuORF;ENST00000492682.5_1_1:117635418-117640830:+|nuORF 51.629811660486645 0.0367964933207742 2 {[QS]|[NT]}M{I|L} 4 5 38.126 0.0 0.0 3.8605 0.0 0.0 0.0 525.3457993976834 525.3457993976834 15.166710578991207 0.0 0.0 0.0 0 0.7614393726401688 1.154901959985743 0.0 0.6989700043360187 + {[QS]|[NT]}M{I|L} 3.8605 + + 246 1 1.995 45568.2 0.3799999952316284 5230 3725 8956 DOHH2_400M_050219_2,8957 DOHH2_400M_050219_2,8957,TNMLKVVAL True True TNMLKVVAL 51.859748 494.796710193157 598479.8125 8956.0 ENST00000492682.5_1_1:117635418-117640830:+|nuORF;;ENST00000463696.1_1_1:117637951-117640053:+|nuORF;;ENSG00000116830|ENST00000369466|TTF2 6.337609608968099 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8958 51.874 800.0 208560.0 25 0 27576.0 + 1222 AIHTAILTL 9 121 476.7950983703872 951.5756438075744 2 476.7948791384697 MULTI CID FTMS 0 0 0 8956 152735.09375 0.0599521469428241 -9 0.3411064147949219 2 Unmodified _AIHTAILTL_ ENSG00000106588|ENST00000223321|PSMA2 81.86404211737425 0.017065112157077 2 [{I|L}T]HAA{I|L}{I|L}T{I|L} 9 2 + 69.009 0.0 0.0 7.252 7.252 80.186 0.0 0.0 0.0 1.4233291587566583 8.824995917031941 1.4233291587566583 0.5115252244738144 0 0.8182503180159344 1.5228787452803376 1.8764613514953887 0.0 [{I|L}T]HAA{I|L}{I|L}T{I|L};[{I|L}T]AHA{I|L}{I|L}T{I|L};[{I|L}A]HTA{I|L}{I|L}T{I|L};[{I|L}T]HA{I|L}A{I|L}T{I|L};[{I|L}T]AH{I|L}A{I|L}T{I|L};[{I|L}A]HT{I|L}A{I|L}T{I|L};[{I|L}T]HAA{I|L}T{I|L}{I|L};[{I|L}T]AHA{I|L}T{I|L}{I|L};[{I|L}A]HTA{I|L}T{I|L}{I|L};[{I|L}A]THA{I|L}{I|L}T{I|L} 7.252;7.1983;7.1025;6.7928;6.739;6.6432;6.2501;6.1964;6.1005;6.0997 -;-;+;-;-;-;-;-;-;- + 2606 1 1.995 129336.0 0.5199999809265137 5231 3725 8956 DOHH2_400M_050219_2,8958 DOHH2_400M_050219_2,8958,AIHTAILTL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8959 51.887 800.0 209140.0 25 0 9289.9 + 15985 ITDLPDHLLSY 11 137 643.8351084184253 1285.6556639036503 2 643.8348266482353 MULTI CID FTMS 0 0 0 8956 93231.6015625 0.1156453286580246 -8 0.3083992004394531 3 Unmodified _ITDLPDHLLSY_ ENSG00000219545|ENST00000682710|UMAD1;ENST00000406829.2_2_7:7812042-7917166:+|nuORF 145.12958885780327 0.0054465469017829 2 {I|L}TD{I|L}P[NG]PP{I|L}SY 12 4 + 103.15 0.0 0.0 8.0231 8.0231 94.215 0.0 0.0 0.0 11.766466800796408 11.766466800796408 11.766466800796408 11.766466800796408 0 2.4604093769761874 1.6989700043360187 1.2689301784845295 0.3494850021680094 {I|L}TD{I|L}P[NG]PP{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]{I|L}SE{I|L}{I|L}SY;{I|L}TD{I|L}P[NG]PPS{I|L}Y;[{I|L}T]D{I|L}[{M(Oxidation (M))|F}T]T{I|L}{I|L}SY;{I|L}TD{I|L}P{[QN]|[E{I|L}]|[KN]}[HV]SY;[{I|L}T][{M(Oxidation (M))|F}T]{I|L}DT{I|L}{I|L}SY;[{I|L}T][{M(Oxidation (M))|F}T]{I|L}SE{I|L}S{I|L}Y;[{I|L}T][{M(Oxidation (M))|F}T]{I|L}SE{I|L}SY{I|L};[{I|L}T]D[{M(Oxidation (M))|F}T]{I|L}T{I|L}{I|L}SY;[{I|L}T]D{I|L}[{M(Oxidation (M))|F}T]T{I|L}S{I|L}Y 8.0231;7.1079;7.0597;6.8933;6.8933;6.8737;6.8443;6.7669;6.7385;6.6297 -;-;-;-;-;-;-;-;-;- 19067 + 1 1.995 134079.4 0.3899999856948852 5232 3725 8956 DOHH2_400M_050219_2,8959 DOHH2_400M_050219_2,8959,ITDLPDHLLSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8961 51.904 800.0 69386.0 25 0 3762.9 -1 0 74 1029.8303734242431 3086.4692908729294 3 1030.495288074017 MULTI CID FTMS 0 0 0 8960 130095.6484375 0.1174028982497494 18 -0.4584808349609375 1 2 [MN][DN]N 5 -1 26.478 0.0 0.0 0.85788 0.0 0.0 0.0 2495.1403712138813 2495.1403712138813 12.66589350960075 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MN][DN]N 0.85788 - 253 + 1 1.995 46459.0 0.4399999976158142 5233 3726 8960 DOHH2_400M_050219_2,8961 DOHH2_400M_050219_2,8961, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8964 51.918 449.0 88898.0 25 0 4145.9 + 32687 SDTSDIVHIW 10 86 586.7826230924046 1171.5506932516091 2 586.7830078005791 MULTI CID FTMS 0 0 0 8963 105620.5703125 0.9335553474456176 1 -0.0243644714355468 1 Unmodified _SDTSDIVHIW_ ENSG00000151725|ENST00000281453|CENPU;nc|ENSG00000151725|Q71F23-3|CENPU 61.357469665136826 0.0330252915653943 2 {[DS]|[MA]|[CV]|TT}TSD{I|L}VH{I|L}W 10 0 + 53.906 0.0 0.0 4.6013 4.6013 85.046 0.0 0.0 0.0 11.308422131034844 13.010299956639813 11.308422131034844 17.501225267833995 0 1.2302046884880935 0.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}TSD{I|L}VH{I|L}W;{[DS]|[MA]|[CV]|TT}T[WE]VH{I|L}W;{[DS]|[MA]|[CV]|TT}T[YQ]{I|L}{M(Oxidation (M))|F}{I|L}W 4.6013;3.1074;2.74 +;-;- + 290 + 1 1.995 35292.0 1.0 5234 3728 8963 DOHH2_400M_050219_2,8964 DOHH2_400M_050219_2,8964,SDTSDIVHIW True True SDTSDIVHIW 51.918396 586.783007800579 599628.125 8963.0 ENSG00000151725|ENST00000281453|CENPU;;nc|ENSG00000151725|Q71F23-3|CENPU 7.111520131429036 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8965 51.932 800.0 102800.0 25 0 7021.4 + 34030 SLKERFAFL 9 116 555.819228390866 1109.623903848532 2 555.8185302615166 MULTI CID FTMS 0 0 0 8963 96265.28125 0.8471827326464084 -2 0.0204696655273437 2 Unmodified _SLKERFAFL_ ENSG00000064726|ENST00000261721|BTBD1;nc|ENSG00000064726|Q9H0C5-2|BTBD1 40.23920728925047 0.0741434193262949 2 {[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V][WK]A{M(Oxidation (M))|F}{I|L} 9 4 + 34.591 0.0 0.0 3.1174 3.1174 73.914 0.0 0.0 0.0 9.338702756058986 13.50379364601566 9.338702756058986 6.800850554378449 0 1.2059771852360797 1.6989700043360187 0.2742275032520141 0.0 {[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V][WK]A{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V][WK]{M(Oxidation (M))|F}A{I|L};{[TV]|[{I|L}S]}D[RH][K{I|L}]E{I|L};{[ES]|[DT]|[{I|L}C]}V[RH][W{I|L}]A{I|L} 3.1174;2.5045;2.1011;0.28042 -;-;-;- 311 1 1.995 66240.2 1.0 5235 3728 8963 DOHH2_400M_050219_2,8965 DOHH2_400M_050219_2,8965,SLKERFAFL True True SLKERFAFL 51.93222 555.818530261517 708741.5625 8963.0 nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1 5.02061398824056 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8968 51.953 800.0 139680.0 25 0 9002.4 -1 0 93 914.9297870602755 1827.8450211873512 2 914.9308349490166 MULTI CID FTMS 0 0 0 8967 83236.34375 0.4272200159111031 -5 0.0943107604980468 1 2 C(Carbamidomethyl (C)){M(Oxidation (M))|F}AHAQQDA{M(Oxidation (M))|F}YQV{I|L} 14 -1 110.7 0.0 0.0 6.0566 0.0 0.0 131.09497267890782 0.0 131.09497267890782 0.0 86.01210159973888 0.0 0.0 0 1.048455006504028 0.0 0.7742275032520141 0.75 C(Carbamidomethyl (C)){M(Oxidation (M))|F}AHAQQDA{M(Oxidation (M))|F}YQV{I|L} 6.0566 - 2604 1 1.995 81118.3 0.4000000059604645 5236 3730 8967 DOHH2_400M_050219_2,8968 DOHH2_400M_050219_2,8968, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8969 51.967 800.0 153330.0 25 0 21663.0 + 5354 DLIIKGISV 9 121 479.3027865492594 956.5910201653188 2 479.3023254275322 MULTI CID FTMS 0 0 0 8967 97222.3671875 0.1201227016818328 -6 0.1207351684570312 2 Unmodified _DLIIKGISV_ ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP 29.84058131909904 0.1515068451768857 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KKEV 8 3 + 54.671 0.0 0.0 5.7152 5.7152 82.08 0.0 0.0 0.0 13.384315473529185 6.020599913279625 6.020599913279625 6.020599913279625 0 1.1549471895720984 2.0 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KKEV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KKD{I|L};{[TV]|[{I|L}S]}GK{I|L}{I|L}{I|L}DV;{I|L}{I|L}KG{I|L}S{I|L}DV;{[TV]|[{I|L}S]}G{I|L}K{I|L}{I|L}DV;[K{I|L}]G{I|L}{I|L}S{I|L}DV;{I|L}{I|L}KGS{I|L}{I|L}DV;[K{I|L}]{I|L}G{I|L}S{I|L}DV;[K{I|L}]G{I|L}S{I|L}{I|L}DV;[K{I|L}]GS{I|L}{I|L}{I|L}DV 5.7152;5.0858;3.1101;2.4517;2.2617;2.1489;1.721;1.6023;1.4182;1.2213 -;-;-;-;-;-;-;-;-;- 839 + 1 1.995 94966.1 0.4000000059604645 5237 3730 8967 DOHH2_400M_050219_2,8969 DOHH2_400M_050219_2,8969,DLIIKGISV False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8970 51.98 800.0 91871.0 25 0 8702.7 + 17439 KNFDMVIVY 9 97 564.7912191957749 1127.5678854583498 2 564.7917968630791 MULTI CID FTMS 0 0 0 8967 87311.234375 0.4429563372528826 -3 0.0324897766113281 3 Unmodified _KNFDMVIVY_ ENSG00000092201|ENST00000216297|SUPT16H 60.07390631473393 0.0260411565414776 2 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}DMV{I|L}VY 9 0 + 75.228 0.0 0.0 6.6717 6.6717 79.678 0.0 0.0 0.0 1.249387366082999 16.47817481888638 1.249387366082999 1.249387366082999 0 1.0 0.0 0.7134679910804405 1.0010912013506126 + + {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}DMV{I|L}VY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}KDMV{I|L}VY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DKMV{I|L}VY;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}DMVV{I|L}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}DM{I|L}VVY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}KDMVV{I|L}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}KDM{I|L}VVY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DKMVV{I|L}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DMKV{I|L}VY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DKM{I|L}VVY 6.6717;6.5609;6.4501;5.5381;5.4581;5.4273;5.3473;5.3165;5.241;5.2365 +;-;-;-;-;-;-;-;-;- + 800 1 1.995 64706.7 0.3899999856948852 5238 3730 8967 DOHH2_400M_050219_2,8970 DOHH2_400M_050219_2,8970,KNFDMVIVY True True KNFDMVIVY 51.980345 564.791796863079 1070923.5 8967.0 ENSG00000092201|ENST00000216297|SUPT16H 8.068700472513834 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8972 51.985 19.0 2280100.0 25 0 220680.0 + 849 AETPDIKLF 9 78 517.2816068735767 1032.5486608139531 2 517.2819702029228 MULTI CID FTMS 0 0 0 8971 2414834.75 0.0780997755229744 11 -0.3291015625 1 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 33.4449034751529 0.1114409586740657 2 [DP]{I|L}K{I|L}T 6 4 37.994 0.0 0.0 3.6797 0.0 0.0 0.0 362.1348758413474 362.1348758413474 -0.3706086345021475 0.0 -0.3706086345021475 0.0 0 0.0 1.154901959985743 0.7059771852360797 0.0 [DP]{I|L}K{I|L}T 3.6797 - 233 1 1.995 42119.8 1.0 5239 3731 8971 DOHH2_400M_050219_2,8972 DOHH2_400M_050219_2,8972,AETPDIKLF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8973 51.989 221.0 236550.0 25 0 31964.0 + + 39634 VSDIVGPDGLVY 12 76 617.3217431862107 1232.628933439221 2 617.3215820193291 MULTI CID FTMS 0 0 0 8971 286581.34375 0.0974919759918034 11 -0.3291015625 2 Unmodified _VDSLYVIYVY_ ENSG00000105202|ENST00000221801|FBL 26.88365393820708 0.3646707531412818 2 [VS]D{I|L}VYY{I|L}[YV] 10 -1 + 43.121 0.0 0.0 3.4983 3.4983 74.018 0.0 0.0 0.0 4.884381005764311 26.131674952134105 4.884381005764311 6.047575072713158 0 0.9247425010840048 0.0 1.1989700043360187 0.0 [VS]D{I|L}VYY{I|L}[YV];[VS]DV{I|L}YY{I|L}[YV];[VS]EVVYY{I|L}[YV];{[TV]|[{I|L}S]}DVVYY{I|L}[YV];VV{[ES]|[DT]|[{I|L}C]}VYY{I|L}[YV];{[TV]|[{I|L}S]}{[CP]|[EA]}{I|L}YY{I|L}[YV] 3.4983;3.0077;2.8277;2.7264;1.5508;1.3458 -;-;-;-;-;- 344 1 1.995 43861.2 1.0 5240 3731 8971 DOHH2_400M_050219_2,8973 DOHH2_400M_050219_2,8973,VDSLYVIYVY False False VSDIVGPDGLVY 51.989339 617.321582019329 60670674.0 8971.0 ENSG00000105202|ENST00000221801|FBL 6.382484753926595 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8975 51.996 238.0 248300.0 25 0 22319.0 + 25459 NEIEDTFRQF 10 69 649.8041812144376 1297.593809495675 2 649.8038818240166 MULTI CID FTMS 0 0 0 8974 255234.140625 0.0214471459175499 19 -0.48529052734375 1 Unmodified _NEIEDTFRQF_ ENSG00000128524|ENST00000249289|ATP6V1F 74.19965305603844 0.0188013450058842 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F} 10 0 + 65.948 0.0 0.0 5.0824 5.0824 82.857 0.0 0.0 0.0 54.52839547293219 10.532631133464513 10.532631133464513 9.164539485499247 0 1.0 0.0 0.4247425010840047 0.7134679910804405 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}RQ{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}[VG]Q{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}R[AG]{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDT{M(Oxidation (M))|F}[VG][AG]{M(Oxidation (M))|F} 5.0824;4.3761;4.1536;3.1228 +;-;-;- + 151 + 1 1.995 50095.8 1.0 5241 3732 8974 DOHH2_400M_050219_2,8975 DOHH2_400M_050219_2,8975,NEIEDTFRQF True True NEIEDTFRQF 51.996355 649.803881824017 347025200.0 8974.0 ENSG00000128524|ENST00000249289|ATP6V1F 7.052107016245524 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8976 52.008 689.0 153050.0 25 0 12286.0 + 33104 SESLLRGIYAY 11 84 636.3351482759373 1270.6557436186745 2 636.3345214724541 MULTI CID FTMS 0 0 0 8974 165699.8125 1.0 0 0.0 2 Unmodified _SESLLRGIYAY_ ENSG00000161960|ENST00000293831|EIF4A1;ENST00000550578.1_1_12:53547103-53547616:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;ENST00000584054.5_1_17:7476159-7478064:+|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1 47.72431441374281 0.1302327715749751 2 G{I|L}YAY 5 6 46.938 0.0 0.0 3.694 0.0 0.0 685.3755017022324 0.0 685.3755017022324 0.0 19.54242509439325 0.0 0.0 0 1.5 0.0 0.0 0.0 + G{I|L}YAY 3.694 + + 84 1 1.995 84014.0 1.0 5242 3732 8974 DOHH2_400M_050219_2,8976 DOHH2_400M_050219_2,8976,SESLLRGIYAY False True SESLLRGIYAY 52.00833 636.334521472454 818291.625 8974.0 ENST00000582848.5_1_17:7476159-7480015:+|nuORF;;ENST00000584054.5_1_17:7476159-7478064:+|nuORF;;ENST00000550578.1_1_12:53547103-53547616:+|nuORF;;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;;ENST00000580461.5_1_17:7476163-7478717:+|nuORF 8.116976102193197 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8978 52.018 324.0 137910.0 25 0 12556.0 + 4733 DEEQVFHFY 9 76 607.2617802295193 1212.5090075258386 2 607.2619506716728 MULTI CID FTMS 0 0 0 8977 135876.875 0.5803022534915583 -3 0.0720367431640625 1 Unmodified _DEEQVFHFY_ ENSG00000101868|ENST00000379068|POLA1;nc|ENSG00000101868|P09884|POLA1 53.57557251787612 0.0325303259649373 2 {[{M(Oxidation (M))|F}H]|[RQ]}V{M(Oxidation (M))|F}QY{M(Oxidation (M))|F} 7 6 39.97 0.0 0.0 3.2965 0.0 0.0 0.0 241.0475782259671 241.0475782259671 12.01167895154896 0.0 0.0 0.0 0 0.3807196863200844 1.2218487496163564 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}V{M(Oxidation (M))|F}QY{M(Oxidation (M))|F} 3.2965 - 220 1 1.995 37994.1 1.0 5243 3733 8977 DOHH2_400M_050219_2,8978 DOHH2_400M_050219_2,8978,DEEQVFHFY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8979 52.032 800.0 141600.0 25 0 17518.0 + 31000 RLEIEPEWAY 10 82 653.3271187497793 1304.6396845663585 2 653.3266479372978 MULTI CID FTMS 0 0 0 8977 112103.046875 0.8125871244502977 -2 0.0279922485351562 2 Unmodified _RLEIEPEWAY_ ENSG00000100442|ENST00000396062|FKBP3 51.41523569358685 0.0718446036348414 2 [R{I|L}]E{I|L}E[EP]WAY 10 0 + 60.01 0.0 0.0 4.5997 4.5997 76.772 0.0 0.0 0.0 4.590109796761546 31.62031667669204 4.590109796761546 5.18513939877888 0 1.5994850021680094 0.0 0.3807196863200844 0.3252574989159953 + + [R{I|L}]E{I|L}E[EP]WAY;[R{I|L}]ENK[EP]GEAY;[R{I|L}]ENK[EP]GAEY;[R{I|L}]ENK[EP]QEY;[R{I|L}]EGGK[EP]GEAY;[R{I|L}]E{I|L}E[WP]EAY;[R{I|L}]EGGK[EP]GAEY;[TP][WK]K[EP]GEAY;[R{I|L}]E{I|L}E[WP]AEY;[R{I|L}]EGGK[EP]QEY 4.5997;4.2023;3.819;3.6807;3.5026;3.4436;3.1193;3.1078;3.0603;2.9783 +;-;-;-;-;-;-;-;-;- + 775 1 1.995 89074.1 0.4399999976158142 5244 3733 8977 DOHH2_400M_050219_2,8979 DOHH2_400M_050219_2,8979,RLEIEPEWAY True True RLEIEPEWAY 52.031945 653.326647937298 757904.9375 8977.0 ENSG00000100442|ENST00000396062|FKBP3 7.482467492421468 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8980 52.046 800.0 56456.0 25 0 14727.0 -1 0 40 1148.1592773666732 3441.45600270022 3 1148.493212878704 MULTI CID FTMS 0 0 0 8977 97208.234375 0.7825903738392821 -3 0.0720367431640625 3 2 G 1 -1 6.9897 0.0 0.0 0.2031 0.0 0.0 1856.6521219402573 1524.7583975465632 3381.4105194868207 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.2031 - 8 + 1 1.995 43397.5 0.3499999940395355 5245 3733 8977 DOHH2_400M_050219_2,8980 DOHH2_400M_050219_2,8980, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8982 52.062 800.0 72594.0 25 0 6077.2 + 461 AEFQSIPRVF 10 89 597.3191918136458 1192.6238306940916 2 597.3192016482353 MULTI CID FTMS 0 0 0 8981 64570.25 0.3231210055519787 6 -0.1888999938964843 1 Unmodified _AEFQSIPRVF_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 41.95555342248728 0.1369168616057562 2 {[CP]|[EA]}{M(Oxidation (M))|F}QS{I|L}P[RV]{M(Oxidation (M))|F} 10 0 + 52.642 0.0 0.0 4.414 4.414 80.212 0.0 0.0 0.0 37.45235939505172 2.1084052438762058 2.1084052438762058 9.164539485499256 0 0.9247425010840048 0.0 0.3807196863200844 0.8494850021680094 + + {[CP]|[EA]}{M(Oxidation (M))|F}QS{I|L}P[RV]{M(Oxidation (M))|F};{[CP]|[EA]}{M(Oxidation (M))|F}[AG]S{I|L}P[RV]{M(Oxidation (M))|F} 4.414;3.6455 +;- + 101 + 1 1.995 48340.6 0.4099999964237213 5246 3734 8981 DOHH2_400M_050219_2,8982 DOHH2_400M_050219_2,8982,AEFQSIPRVF False True AEFQSIPRVF 52.06218 597.319201648235 2928071.0 8981.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 7.020517190297444 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8983 52.067 260.0 223260.0 25 0 16015.0 + 22926 LSDVFPGVQY 10 99 562.7853626073036 1123.556172281407 2 562.7847778201103 MULTI CID FTMS 0 0 0 8981 218225.21875 0.96249263731498 -1 0.0374717712402343 2 Unmodified _LSDVFPGVQY_ ENSG00000197102|ENST00000360184|DYNC1H1 49.93300154707207 0.0805441195901191 2 {[TV]|[{I|L}S]}DV{M(Oxidation (M))|F}[RP]QY 9 2 {[TV]|[{I|L}S]}DV + + 28.213 12.624 3.0476 2.5111 2.5111 48.054 0.0 0.0 0.0 0.0 14.56909704601114 0.0 0.0 0 0.75 0.0 0.0 0.6989700043360187 {[TV]|[{I|L}S]}DV{M(Oxidation (M))|F}[RP]QY 2.5111 - 308 + 1 1.995 50140.9 1.0 5247 3734 8981 DOHH2_400M_050219_2,8983 DOHH2_400M_050219_2,8983,LSDVFPGVQY True True LSDVFPGVQY 52.067005 562.78477782011 1324886.0 8981.0 ENSG00000197102|ENST00000360184|DYNC1H1 6.886191209157308 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8984 52.081 800.0 107710.0 25 0 9755.6 + 13357 HLFPKLEL 8 114 498.7972590834074 995.5799652336148 2 498.7972289919853 MULTI CID FTMS 0 0 0 8981 101140.515625 0.7639141573402871 -1 0.0374717712402343 3 Unmodified _HLFPKLEL_ ENSG00000144028|ENST00000323853|SNRNP200 58.6788170122104 0.1149141431586871 2 {I|L}H{M(Oxidation (M))|F}PK{I|L}E{I|L} 8 2 + 74.709 0.0 0.0 7.504 7.504 92.699 0.0 0.0 0.0 51.03662622350441 18.953650195120844 18.953650195120844 9.51544993495972 0 2.004432191740108 1.6989700043360187 1.4802046884880935 0.0 {I|L}H{M(Oxidation (M))|F}PK{I|L}E{I|L};{I|L}H{I|L}MK{I|L}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}{I|L}HE{I|L};[H{I|L}]{M(Oxidation (M))|F}PK{I|L}E{I|L};{I|L}{M(Oxidation (M))|F}HPK{I|L}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}H{I|L}E{I|L};[KP]{M(Oxidation (M))|F}{I|L}{I|L}HE{I|L};[KP]{I|L}{M(Oxidation (M))|F}{I|L}HE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}E{I|L}H{I|L};{[QN]|[E{I|L}]|[KN]}[KP]{I|L}H{M(Oxidation (M))|F}{I|L} 7.504;6.5483;5.4416;5.3938;4.9115;4.1847;3.816;3.816;3.3297;3.0831 -;-;-;+;-;-;-;-;-;- + 490 + 1 1.995 71768.4 0.4099999964237213 5248 3734 8981 DOHH2_400M_050219_2,8984 DOHH2_400M_050219_2,8984,HLFPKLEL True True HLFPKLEL 52.080821 498.797228991985 811545.3125 8981.0 ENSG00000144028|ENST00000323853|SNRNP200 5.943634192148845 2.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8986 52.092 416.0 158810.0 25 0 13751.0 + 44358 YLRELLTTM 9 101 570.3100807350419 1138.6056085368837 2 570.3102905154228 MULTI CID FTMS 0 0 0 8985 147173.78125 0.842227877140225 -1 0.0350914001464843 1 Unmodified _YLRELLTTM_ ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B 43.77239144664712 0.0547478964384323 2 E{I|L}{I|L}TTM 6 3 48.353 0.0 0.0 4.2467 0.0 0.0 432.2470265119157 0.0 432.2470265119157 0.0 24.680475292681265 0.0 0.0 0 0.9247425010840048 0.0 1.0 0.0 + E{I|L}{I|L}TTM 4.2467 + + 943 1 1.995 55663.9 1.0 5249 3735 8985 DOHH2_400M_050219_2,8986 DOHH2_400M_050219_2,8986,YLRELLTTM True True YLRELLTTM 52.092213 570.310290515423 989829.0 8985.0 ENSG00000101608|ENST00000217652|MYL12A;;ENSG00000118680|ENST00000237500|MYL12B 5.609652837117513 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8987 52.105 731.0 111760.0 25 0 13539.0 + -1 LSDSFSDLYSSY 12 95 692.3013235092674 1382.588094085335 2 692.3019286990166 MULTI CID FTMS 0 0 0 8985 100313.2890625 0.4271979276937928 -2 0.0725631713867187 2 Oxidation (M) _SYSEREKNM(Oxidation (M))HS_ nc|ENSG00000058804|Q9BTX1-2|NDC1;nc|ENSG00000058804|Q9BTX1-4|NDC1;nc|ENSG00000058804|Q9BTX1-3|NDC1;nc|ENSG00000058804|Q9BTX1-5|NDC1;ENSG00000058804|ENST00000371429|NDC1 17.11289562659939 0.6791789249425932 2 {[TV]|[{I|L}S]}DC{I|L}YG{I|L} 8 -1 47.426 0.0 0.0 3.4302 0.0 0.0 0.0 515.1791885569885 515.1791885569885 0.026753591920503 0.0 0.0 0.0 0 0.0 0.958607314841775 1.350576203518622 0.0 {[TV]|[{I|L}S]}DC{I|L}YG{I|L} 3.4302 - 2550 1 1.995 65156.9 1.0 5250 3735 8985 DOHH2_400M_050219_2,8987 DOHH2_400M_050219_2,8987,SYSEREKNMHS False False LSDSFSDLYSSY 52.104894 692.301928699017 1278757.0 8985.0 nc|ENSG00000058804|Q9BTX1-2|NDC1;;nc|ENSG00000058804|Q9BTX1-4|NDC1;;nc|ENSG00000058804|Q9BTX1-3|NDC1;;nc|ENSG00000058804|Q9BTX1-5|NDC1;;ENSG00000058804|ENST00000371429|NDC1 8.758597056070963 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 8988 52.119 800.0 81041.0 25 0 4382.6 -1 0 76 797.0396014242405 0 797.0403320193291 PEAK CID FTMS 0 0 0 8985 77192.6875 0.9640829094613304 1 -0.037841796875 3 2 PPPPPA 6 -1 22.695 0.0 0.0 1.4255 0.0 0.0 841.6590892141234 191.0829104059204 1032.7419996200438 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPPPA 1.4255 - 1034 + 1 1.995 51855.6 0.3499999940395355 5251 3735 8985 DOHH2_400M_050219_2,8988 DOHH2_400M_050219_2,8988, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8990 52.124 27.0 1349700.0 25 0 172400.0 + 1223 AIHTAILTL 9 66 476.7950983703872 951.5756438075744 2 476.7950317263603 MULTI CID FTMS 0 0 0 8989 1854479.75 0.7279272873362919 2 -0.0717964172363281 1 Unmodified _AIHTAILTL_ ENSG00000106588|ENST00000223321|PSMA2 70.71552829651908 0.0208223590022201 2 [{I|L}T][HA]A{I|L}{I|L}T{I|L} 9 2 + 59.332 0.0 0.0 6.2351 6.2351 89.593 0.0 0.0 0.0 9.946049681132934 31.88424994129406 9.946049681132934 10.268024924119672 0 0.8182503180159344 1.5228787452803376 1.579689690656103 0.0 [{I|L}T][HA]A{I|L}{I|L}T{I|L};[{I|L}T][HA]{I|L}A{I|L}T{I|L};[HT][{I|L}A]A{I|L}{I|L}T{I|L};[{I|L}T]{I|L}[HA]A{I|L}T{I|L};[HT][{I|L}A]{I|L}A{I|L}T{I|L};[H{I|L}]{I|L}{I|L}A[TA]T{I|L};[H{I|L}]{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L};[{I|L}T][HA]{I|L}[{I|L}T]A{I|L};[{I|L}T]{I|L}[HA][{I|L}T]A{I|L};[HT][{I|L}A]{I|L}[{I|L}T]A{I|L} 6.2351;5.156;4.4497;4.3933;3.3706;3.2111;2.8467;2.5254;1.7627;0.74001 -;-;-;-;-;-;-;-;-;- 197 1 1.995 37517.4 1.0 5252 3736 8989 DOHH2_400M_050219_2,8990 DOHH2_400M_050219_2,8990,AIHTAILTL True True AIHTAILTL 52.123527 476.79503172636 46334520.0 8989.0 ENSG00000106588|ENST00000223321|PSMA2 5.441331068674724 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8991 52.125 29.0 1241700.0 25 0 90122.0 + 4810 DEQTPIHISW 10 66 613.2960206139124 1224.5774882946248 2 613.2961303591728 MULTI CID FTMS 0 0 0 8989 1685964.0 0.5912344983929195 3 -0.0758628845214843 2 Unmodified _DEQTPIHISW_ ENSG00000100526|ENST00000335183|CDKN3 45.739877483867886 0.1051543674217965 2 [H{I|L}]P{I|L}[YQ]T 7 8 29.579 0.0 0.0 2.4154 0.0 0.0 0.0 369.1050646620441 369.1050646620441 10.599136058276136 0.0 0.0 0.0 0 0.7742275032520141 0.8860566476931632 0.0 0.0 [H{I|L}]P{I|L}[YQ]T 2.4154 - 134 1 1.995 34263.9 1.0 5253 3736 8989 DOHH2_400M_050219_2,8991 DOHH2_400M_050219_2,8991,DEQTPIHISW True True DEQTPIHISW 52.124706 613.296130359173 56198904.0 8989.0 ENSG00000100526|ENST00000335183|CDKN3 9.417257150014242 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8992 52.134 504.0 107160.0 25 0 5865.8 -1 0 66 1002.9755491717603 2003.9365454103208 2 1003.476733386517 MULTI CID FTMS 0 0 0 8989 152826.09375 0.5816822085305802 -3 0.1104049682617187 3 2 [MN][NP]{I|L}NEEQK 10 -1 60.353 0.0 0.0 3.0117 0.0 0.0 0.0 803.3452852838499 803.3452852838499 6.348876663418949 0.0 0.0 0.0 0 0.6747425010840047 1.5228787452803376 0.3494850021680094 0.4247425010840047 [MN][NP]{I|L}NEEQK 3.0117 - 765 + 1 1.995 44622.8 1.0 5254 3736 8989 DOHH2_400M_050219_2,8992 DOHH2_400M_050219_2,8992, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8993 52.147 800.0 160670.0 25 0 13231.0 + 6907 EEFELLGKAY 10 122 599.8034246455604 1197.5922963579208 2 599.8026611208916 MULTI CID FTMS 0 0 0 8989 114599.3203125 0.2118173827829429 -4 0.1293983459472656 4 Unmodified _EEFELLGKAY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 106.94017166704064 0.0046191154308253 2 EE{M(Oxidation (M))|F}E{I|L}{I|L}GKAY 10 0 + 75.236 0.0 0.0 6.2823 6.2823 85.971 0.0 0.0 0.0 11.9824780801422 11.9824780801422 11.9824780801422 7.800857501608448 0 1.7764209843288905 1.3010299956639813 0.3807196863200844 0.0 + + EE{M(Oxidation (M))|F}E{I|L}{I|L}GKAY;EE{M(Oxidation (M))|F}E{I|L}{I|L}[KQ]Y;EE{M(Oxidation (M))|F}E{I|L}KK{I|L}Y;EE{M(Oxidation (M))|F}E{I|L}[KQ]{I|L}Y;[{M(Oxidation (M))|F}E]EE{I|L}KK{I|L}Y;[{M(Oxidation (M))|F}E]EE{I|L}[KQ]{I|L}Y;[KG]{I|L}A{I|L}E{M(Oxidation (M))|F}EEY;[KG]A{I|L}{I|L}E{M(Oxidation (M))|F}EEY;[KG]{I|L}{I|L}AE{M(Oxidation (M))|F}EEY;[KG]{I|L}{I|L}EA{M(Oxidation (M))|F}EEY 6.2823;5.6309;5.2817;5.2817;3.7374;3.7374;3.1373;2.8995;2.7389;2.4875 +;-;-;-;-;-;-;-;-;- + 1336 + 1 1.995 96338.6 0.449999988079071 5255 3736 8989 DOHH2_400M_050219_2,8993 DOHH2_400M_050219_2,8993,EEFELLGKAY True True EEFELLGKAY 52.147463 599.802661120892 10254177.75 8989.0 nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 7.178755124409993 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8994 52.157 557.0 97431.0 25 0 5070.6 -1 0 73 881.9077021475272 1761.8008513618545 2 881.9073364138603 MULTI CID FTMS 0 0 0 8989 116295.96875 0.7615995700709809 -3 0.1104049682617187 5 2 [YE][C(Carbamidomethyl (C))K]AQQNA{M(Oxidation (M))|F}[YE][{I|L}V] 14 -1 + 63.706 0.0 0.0 3.616 3.616 70.861 0.0 0.0 0.0 12.164758744809523 41.03031650958563 12.164758744809523 3.0102999566398125 0 0.0 1.2218487496163564 0.0 0.805462187404089 [YE][C(Carbamidomethyl (C))K]AQQNA{M(Oxidation (M))|F}[YE][{I|L}V];[YE]{M(Oxidation (M))|F}[DP]QQNA{M(Oxidation (M))|F}[YE][{I|L}V];[QA][HD]EAQQNA{M(Oxidation (M))|F}[YE][{I|L}V];[Y{M(Oxidation (M))|F}]E[DP]QQNA{M(Oxidation (M))|F}[YE][{I|L}V];[YQ]{M(Oxidation (M))|F}W[WP]NA{M(Oxidation (M))|F}[YE][{I|L}V];[Y{M(Oxidation (M))|F}]QW[WP]NA{M(Oxidation (M))|F}[YE][{I|L}V] 3.616;3.4451;2.8605;2.4808;1.6347;1.5347 -;-;-;-;-;- 1035 1 1.995 45372.8 1.0 5256 3736 8989 DOHH2_400M_050219_2,8994 DOHH2_400M_050219_2,8994, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 8996 52.162 108.0 323700.0 25 0 16447.0 + 15986 ITDLPDHLLSY 11 60 643.8351084184253 1285.6556639036503 2 643.8348876833916 MULTI CID FTMS 0 0 0 8995 310043.75 0.3845810944594801 4 -0.1108779907226562 1 Unmodified _ITDLPDHLLSY_ ENSG00000219545|ENST00000682710|UMAD1;ENST00000406829.2_2_7:7812042-7917166:+|nuORF 41.95555342248728 0.1822715950200113 2 {I|L}TD{I|L}[HM]{I|L}{I|L} 8 4 64.558 0.0 0.0 5.0214 0.0 0.0 0.0 346.1165560358032 346.1165560358032 48.10402823752675 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 {I|L}TD{I|L}[HM]{I|L}{I|L} 5.0214 - 236 + 1 1.995 37169.7 1.0 5257 3737 8995 DOHH2_400M_050219_2,8996 DOHH2_400M_050219_2,8996,ITDLPDHLLSY False True ITDLPDHLLSY 52.162119 643.834887683392 10472960.0 8995.0 ENSG00000219545|ENST00000682710|UMAD1;;ENST00000406829.2_2_7:7812042-7917166:+|nuORF 8.415803750356039 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8997 52.166 181.0 215650.0 25 0 17751.0 45562 YVDPQFLTY 9 72 573.2792607719726 1144.5439686107452 2 573.2792846560478 MULTI CID FTMS 0 0 0 8995 198533.5625 0.4304778567019397 -8 0.2250289916992187 2 Unmodified _YVDPQFLTY_ ENSG00000181191|ENST00000374571|PJA1;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;nc|ENSG00000181191|Q8NG27|PJA1;nc|ENSG00000198961|O43164-2|PJA2 25.399314129420983 0.2080152500878129 2 [QP]{M(Oxidation (M))|F}D{I|L} 5 6 27.289 0.0 0.0 2.3843 0.0 0.0 0.0 541.2318707926389 541.2318707926389 2.3945608116877217 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [QP]{M(Oxidation (M))|F}D{I|L} 2.3843 - 123 1 1.995 33920.8 1.0 5258 3737 8995 DOHH2_400M_050219_2,8997 DOHH2_400M_050219_2,8997,YVDPQFLTY False True PQNFLVYTY 52.165946 573.279284656048 0.0 8995.0 nc|ENSG00000168619|Q9Y3Q7-3|ADAM18;;ENSG00000168619|ENST00000265707|ADAM18;;nc|ENSG00000168619|Q9Y3Q7-2|ADAM18 0.8128071924050649 2.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8998 52.178 681.0 96623.0 25 0 7345.5 + 33052 SEQDWSAIQNF 11 107 662.7937975313007 1323.5730421294013 2 662.7938720583916 MULTI CID FTMS 0 0 0 8995 107557.765625 0.5598143748182394 -2 0.0763664245605468 3 Unmodified _SEQDWSAIQNF_ ENSG00000103365|ENST00000309859|GGA2;ENST00000566651.1_1_16:23505576-23507079:-|nuORF 45.60251928735463 0.1419832550123853 2 {[QD]|[EN]|[WG]|[KD]|[RS]}TD{[SA]|[TG]}W{I|L}QN{M(Oxidation (M))|F} 11 4 {[QD]|[EN]|[WG]|[KD]|[RS]}TD{[SA]|[TG]}W + + 34.976 18.75 2.3341 2.6425 2.6425 48.306 0.0 0.0 0.0 0.0 14.73726362118688 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.8807196863200843 {[QD]|[EN]|[WG]|[KD]|[RS]}TD{[SA]|[TG]}W{I|L}QN{M(Oxidation (M))|F} 2.6425 - 815 + 1 1.995 53605.9 1.0 5259 3737 8995 DOHH2_400M_050219_2,8998 DOHH2_400M_050219_2,8998,SEQDWSAIQNF False True SEQDWSAIQNF 52.177792 662.793872058392 1164624.75 8995.0 ENST00000566651.1_1_16:23505576-23507079:-|nuORF;;ENSG00000103365|ENST00000309859|GGA2 7.340987364451091 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 8999 52.191 734.0 131780.0 25 0 18394.0 + 32691 SDWVRDVAW 9 99 567.272110346428 1132.529667759656 2 567.2722656130791 MULTI CID FTMS 0 0 0 8995 101104.6640625 0.2265514455397956 -5 0.1679229736328125 4 Unmodified _SDWVRDVAW_ ENSG00000157020|ENST00000350697|SEC13;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 43.9818466556824 0.0535980856389242 2 {[DS]|[MA]|[CV]|TT}WVRDVAW 9 0 + 43.879 0.0 0.0 3.8744 3.8744 77.289 0.0 0.0 0.0 2.922152515121219 21.738569581344507 2.922152515121219 8.46787486224656 0 2.1237125054200234 0.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}WVRDVAW;[DP]{I|L}[KC]SDVAW;{[MG]|[TS]}{[CP]|[EA]}VRDVAW;[DP]{I|L}[KC]VCVA{[DA]|[EG]};[DP]{I|L}[KC]VADSW;[DP]{I|L}[K{I|L}]C(Carbamidomethyl (C))DSW;[DP]{I|L}[KC]VAMA{[DA]|[EG]};[DP]{I|L}[K{I|L}]C(Carbamidomethyl (C))MA{[DA]|[EG]};{[DS]|[MA]|[CV]|TT}WVR[TP]SW;[DP]{I|L}[K{I|L}][CG]DSW 3.8744;3.1267;2.9398;2.3175;1.9981;1.913;1.8962;1.8072;1.7773;1.0999 +;-;-;-;-;-;-;-;-;- + 251 1 1.995 76469.4 1.0 5260 3737 8995 DOHH2_400M_050219_2,8999 DOHH2_400M_050219_2,8999,SDWVRDVAW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9002 52.211 800.0 101220.0 25 0 11721.0 + + -1 SESENWRIF 9 86 584.2715435865966 1166.5285342399932 2 584.2710449099541 MULTI CID FTMS 0 0 0 9001 115752.4140625 0.5741030446975777 -5 0.1487960815429687 1 Carbamidomethyl (C) _TDSQC(Carbamidomethyl (C))LTVLM_ nc|ENSG00000204120|Q6Y7W6-5|GIGYF2;ENSG00000204120|ENST00000373563|GIGYF2;nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;nc|ENSG00000204120|Q6Y7W6-3|GIGYF2 26.268140514670165 0.3785003716575977 2 YVDY 4 -1 57.964 0.0 0.0 4.9689 0.0 0.0 0.0 623.2804861603478 623.2804861603478 33.40357227646116 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.3807196863200844 0.0 YVDY 4.9689 - 87 + 1 1.995 65800.6 0.5099999904632568 5261 3739 9001 DOHH2_400M_050219_2,9002 DOHH2_400M_050219_2,9002,TDSQCLTVLM False False SESENWRIF 52.210991 584.271044909954 530079.4375 9001.0 nc|ENSG00000204120|Q6Y7W6-5|GIGYF2;;ENSG00000204120|ENST00000373563|GIGYF2;;nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;;nc|ENSG00000204120|Q6Y7W6-3|GIGYF2 2.833602358897527 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9003 52.221 563.0 105430.0 25 0 18613.0 + 45 AAASHFFNL 9 72 489.2455383535897 976.4765237739796 2 489.2454711794853 MULTI CID FTMS 0 0 0 9001 129835.234375 0.7075564319650514 -1 0.0040664672851562 2 Unmodified _AAASHFFNL_ ENSG00000122550|ENST00000339077|KLHL7;nc|ENSG00000122550|Q8IXQ5-2|KLHL7;nc|ENSG00000122550|Q8IXQ5-3|KLHL7;nc|ENSG00000122550|Q8IXQ5-4|KLHL7;nc|ENSG00000122550|Q8IXQ5-5|KLHL7 48.345845343767074 0.0439967357579942 2 AA{[WN]|[YH]}AA{M(Oxidation (M))|F}N{I|L} 9 4 + 41.098 0.0 0.0 4.2088 4.2088 52.424 0.0 0.0 0.0 0.1230450566754512 13.46787486224656 0.1230450566754512 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 AA{[WN]|[YH]}AA{M(Oxidation (M))|F}N{I|L};AA{[WN]|[YH]}{M(Oxidation (M))|F}AAN{I|L};[HS]A{M(Oxidation (M))|F}AA{M(Oxidation (M))|F}N{I|L};[HS]AAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}N{I|L};AA{[WN]|[YH]}A{M(Oxidation (M))|F}AN{I|L};[HS]A{M(Oxidation (M))|F}{M(Oxidation (M))|F}AAN{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}SAAA{M(Oxidation (M))|F}N{I|L};[HS]{M(Oxidation (M))|F}AAA{M(Oxidation (M))|F}N{I|L};[HS]{M(Oxidation (M))|F}A{M(Oxidation (M))|F}AAN{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}SA{M(Oxidation (M))|F}AAN{I|L} 4.2088;4.2088;4.1962;3.9513;3.9005;3.9005;3.8879;3.8879;3.5922;3.5922 -;-;-;-;-;-;-;-;-;- 552 1 1.995 51920.6 1.0 5262 3739 9001 DOHH2_400M_050219_2,9003 DOHH2_400M_050219_2,9003,AAASHFFNL True True AAASHFFNL 52.22086 489.245471179485 993779.4375 9001.0 nc|ENSG00000122550|Q8IXQ5-5|KLHL7;;nc|ENSG00000122550|Q8IXQ5-2|KLHL7;;nc|ENSG00000122550|Q8IXQ5-4|KLHL7;;ENSG00000122550|ENST00000339077|KLHL7;;nc|ENSG00000122550|Q8IXQ5-3|KLHL7 5.882027705510457 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9004 52.235 800.0 100990.0 25 0 6066.5 -1 0 62 914.9297870602755 1827.8450211873512 2 915.4288207888604 MULTI CID FTMS 0 0 0 9001 101828.40625 0.5186621974455659 3 -0.1148414611816406 3 2 [YQ][EP]EAQQDA{M(Oxidation (M))|F}YKV{I|L} 15 -1 + 68.394 0.0 0.0 3.7418 3.7418 71.33 0.0 0.0 0.0 1.3805764459948051 40.94720941673181 1.3805764459948051 3.0102999566398125 0 0.8979400086720376 0.0 0.0 1.2302046884880935 [YQ][EP]EAQQDA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQENA{M(Oxidation (M))|F}YKV{I|L};[YQ]{M(Oxidation (M))|F}[HA]AQQW{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}[HA]AQQW{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQQW{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQW{M(Oxidation (M))|F}YKV{I|L};[Y{M(Oxidation (M))|F}]Q[HA]AQQW{M(Oxidation (M))|F}YKV{I|L};[Y{M(Oxidation (M))|F}]Q[HA]AQQW{M(Oxidation (M))|F}YQV{I|L} 3.7418;3.5771;3.3081;3.3081;3.1434;3.1434;2.9787;2.9787 -;-;-;-;-;-;-;- 1336 1 1.995 60526.9 0.8999999761581421 5263 3739 9001 DOHH2_400M_050219_2,9004 DOHH2_400M_050219_2,9004, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9006 52.24 161.0 330480.0 25 0 50414.0 + 5355 DLIIKGISV 9 79 479.3027865492594 956.5910201653188 2 479.3024780154228 MULTI CID FTMS 0 0 0 9005 369253.71875 0.456229935409519 4 -0.111175537109375 1 Unmodified _DLIIKGISV_ ENSG00000120948|ENST00000240185|TARDBP;nc|ENSG00000120948|Q13148-4|TARDBP 41.95555342248728 0.0647214845423414 2 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KG{I|L}SV 9 0 + 56.549 0.0 0.0 5.9115 5.9115 92.53 0.0 0.0 0.0 40.60531184956688 10.562215199999804 10.562215199999804 56.54866208804791 0 1.3851518780601924 2.0 0.2396518287104437 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KG{I|L}SV 5.9115 + + 142 + 1 1.995 47982.4 1.0 5264 3740 9005 DOHH2_400M_050219_2,9006 DOHH2_400M_050219_2,9006,DLIIKGISV True True DLIIKGISV 52.240414 479.302478015423 9105038.0 9005.0 ENSG00000120948|ENST00000240185|TARDBP;;nc|ENSG00000120948|Q13148-4|TARDBP 5.001386562983195 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9007 52.254 800.0 66916.0 25 0 3965.6 -1 0 69 966.4686086541864 1930.9226643751724 2 966.9704467654228 MULTI CID FTMS 0 0 0 9005 107229.1953125 1.0 0 0.0 2 2 ENAD{I|L}[NP][EP] 9 -1 35.423 0.0 0.0 1.8345 0.0 0.0 933.502245017775 0.0 933.502245017775 0.0 2.095690636129895 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 ENAD{I|L}[NP][EP] 1.8345 - 196 1 1.995 48613.8 0.7300000190734863 5265 3740 9005 DOHH2_400M_050219_2,9007 DOHH2_400M_050219_2,9007, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9008 52.268 800.0 28068.0 25 0 1307.9 -1 0 41 1076.5289965835225 3226.5651603507667 3 1077.197558581829 MULTI CID FTMS 0 0 0 9005 75693.875 0.9301580060197888 2 -0.074737548828125 3 2 Q 1 -1 4.6041 0.0 0.0 0.14269 0.0 0.0 1735.3366523491727 1360.1117647760375 3095.4484171252107 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.14269 - 5 + 1 1.995 26150.8 0.3499999940395355 5266 3740 9005 DOHH2_400M_050219_2,9008 DOHH2_400M_050219_2,9008, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9010 52.273 58.0 787050.0 25 0 66048.0 + 850 AETPDIKLF 9 79 517.2816068735767 1032.5486608139531 2 517.2820312380791 MULTI CID FTMS 0 0 0 9009 659265.75 0.0213217517616828 21 -0.399658203125 1 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 30.7034409873982 0.1405282614900322 2 {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F} 9 0 + 45.072 0.0 0.0 4.3651 4.3651 73.38 0.0 0.0 0.0 7.147642715192504 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 1.0 0.0 0.0 0.0 + + {[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}TPD{I|L}K{M(Oxidation (M))|F}{I|L};{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}AAK{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}AAK{M(Oxidation (M))|F}{I|L};[PG][RP]{[QV]|[N{I|L}]|[RA]|[KV]}P[WP] 4.3651;4.0736;1.0026;0.71104;0.32564 +;-;-;-;- + 145 + 1 1.995 44543.2 1.0 5267 3741 9009 DOHH2_400M_050219_2,9010 DOHH2_400M_050219_2,9010,AETPDIKLF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9011 52.285 657.0 83035.0 25 0 7236.8 + 4734 DEEQVFHFY 9 81 607.2617802295193 1212.5090075258386 2 607.2615844607353 MULTI CID FTMS 0 0 0 9009 78348.4375 0.3346101007900903 5 -0.123809814453125 2 Unmodified _DEEQVFHFY_ ENSG00000101868|ENST00000379068|POLA1;nc|ENSG00000101868|P09884|POLA1 64.23631603340823 0.0237365939569086 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EQV{M(Oxidation (M))|F}H{M(Oxidation (M))|F}Y 9 0 + 58.369 0.0 0.0 4.8139 4.8139 85.207 0.0 0.0 0.0 38.1914468044949 2.421525057367404 2.421525057367404 14.208187539523747 0 1.1307196863200843 0.0 0.0 0.5 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EQV{M(Oxidation (M))|F}H{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E[AG]V{M(Oxidation (M))|F}H{M(Oxidation (M))|F}Y 4.8139;3.6421 +;- + 305 + 1 1.995 48329.4 1.0 5268 3741 9009 DOHH2_400M_050219_2,9011 DOHH2_400M_050219_2,9011,DEEQVFHFY True True DEEQVFHFY 52.284928 607.261584460735 3144208.25 9009.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1 9.697758356730144 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9012 52.29 282.0 228680.0 25 0 23126.0 + 40643 VLDPYLLKY 9 91 562.3235360927615 1122.632519252323 2 562.3235961794853 MULTI CID FTMS 0 0 0 9009 136963.78125 0.127700811347679 -8 0.2598075866699219 3 Unmodified _VLDPYLLKY_ ENSG00000239789|ENST00000285298|MRPS17 41.8396318013385 0.0653578398400075 2 [{I|L}V]DPY{I|L}{I|L}KY 9 0 + 72.362 0.0 0.0 6.4457 6.4457 94.493 0.0 0.0 0.0 36.16373455765242 13.46787486224656 13.46787486224656 72.36162214053635 0 1.1549471895720984 2.0 0.0 0.0 + + [{I|L}V]DPY{I|L}{I|L}KY 6.4457 + + 231 + 1 1.995 56723.4 1.0 5269 3741 9009 DOHH2_400M_050219_2,9012 DOHH2_400M_050219_2,9012,VLDPYLLKY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9013 52.304 800.0 135550.0 25 0 14059.0 + 40985 VMAPRTLLL 9 87 507.3123951781496 1012.6102374230992 2 507.3125182986259 MULTI CID FTMS 0 0 0 9009 105979.171875 0.1242631236215514 -14 0.3643341064453125 4 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 40.23920728925047 0.0741434193262949 2 VMAP 4 5 59.68 0.0 0.0 5.8937 0.0 0.0 0.0 611.3894154670834 611.3894154670834 29.94341577071616 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMAP 5.8937 + + 70 + 1 1.995 86391.5 0.4000000059604645 5270 3741 9009 DOHH2_400M_050219_2,9013 DOHH2_400M_050219_2,9013,VMAPRTLLL True True VMAPRTLLL 52.303947 507.312518298626 12003644.0 9009.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 3.332282066345215 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9014 52.309 300.0 138250.0 25 0 9163.2 + 25460 NEIEDTFRQF 10 71 649.8041812144376 1297.593809495675 2 650.3025390505791 MULTI CID FTMS 0 0 0 9009 97790.015625 0.0127501939126993 28 -0.4557685852050781 5 Unmodified _NEIEDTFRQF_ ENSG00000128524|ENST00000249289|ATP6V1F 37.07464296494664 0.1884581770199685 2 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDTVVG[WH] 11 5 + 57.695 0.0 0.0 4.4463 4.4463 75.73 0.0 0.0 0.0 43.00244822746525 4.330310536180839 4.330310536180839 4.771212547196626 0 0.9247425010840048 0.0 0.4247425010840047 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDTVVG[WH];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDS{I|L}VG[WH];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDTVV[EP][PG];P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EDTVVG[WH];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EDS{I|L}V[EP][PG];P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EDS{I|L}VG[WH];P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EDTVV[EP][PG];P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EDS{I|L}V[EP][PG];P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EDT[RV][WH];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ED[HK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PG] 4.4463;4.0786;3.8785;3.6933;3.5108;3.3256;3.1255;2.7578;2.4375;2.2522 -;-;-;-;-;-;-;-;-;- 636 + 1 1.995 38010.5 1.0 5271 3741 9009 DOHH2_400M_050219_2,9014 DOHH2_400M_050219_2,9014,NEIEDTFRQF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9017 52.324 428.0 170560.0 25 0 13604.0 + 7833 ELKQGYTFVI 10 74 399.8900737461206 1196.6483918385618 3 399.8900634646416 MULTI CID FTMS 0 0 0 9016 129283.1484375 0.5778715934257421 -1 0.0040702819824218 1 Unmodified _ELKQGYTFVI_ ENSG00000173120|ENST00000529006|KDM2A;ENST00000525379.1_1_11:66985159-66986889:+|nuORF;nc|ENSG00000173120|Q9Y2K7-3|KDM2A 16.565877749689598 0.5695826726197942 2 {I|L} 1 9 16.99 0.0 0.0 1.4198 0.0 0.0 1065.5534039008649 0.0 1065.5534039008649 0.0 -3.187587626244124 -3.187587626244124 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4198 + + 11 + 1 1.995 58466.5 1.0 5272 3743 9016 DOHH2_400M_050219_2,9017 DOHH2_400M_050219_2,9017,ELKQGYTFVI False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9018 52.332 473.0 231140.0 25 0 12608.0 + 10532 FVDPLVTNY 9 118 534.2741650227597 1066.5337771123193 2 534.2729369997978 MULTI CID FTMS 0 0 0 9016 143660.609375 0.3902220055614073 -13 0.3772163391113281 2 Unmodified _FVDPLVTNY_ ENSG00000043514|ENST00000316891|TRIT1;ENST00000462243.2_1_1:40318401-40323020:-|nuORF;ENST00000486825.6_1_1:40315918-40341739:-|nuORF;nc|ENSG00000043514|Q9H3H1-4|TRIT1 46.020951573049366 0.0490941689151868 2 [{I|L}P]DV{M(Oxidation (M))|F}VM 7 7 37.497 0.0 0.0 3.5158 0.0 0.0 0.0 262.1040317517754 262.1040317517754 20.5465394165158 0.0 0.0 0.0 0 0.3252574989159953 1.154901959985743 0.0 0.0 [{I|L}P]DV{M(Oxidation (M))|F}VM 3.5158 - 942 1 1.995 88823.3 1.0 5273 3743 9016 DOHH2_400M_050219_2,9018 DOHH2_400M_050219_2,9018,FVDPLVTNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9019 52.346 800.0 111290.0 25 0 9769.1 + 10338 FSEPSFITESY 11 110 653.7964071115401 1305.5782612898802 2 653.7958251833916 MULTI CID FTMS 0 0 0 9016 91874.7578125 0.8166473302679812 -7 0.1947746276855468 3 Unmodified _FSEPSFITESY_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 81.89019881105858 0.0062508977670184 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PDT{M(Oxidation (M))|F}{I|L} 7 7 42.871 0.0 0.0 3.2837 0.0 0.0 0.0 495.1724649970776 495.1724649970776 8.990437130769138 0.0 0.0 0.0 0 0.3252574989159953 1.0969100130080565 1.9476212463643423 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PDT{M(Oxidation (M))|F}{I|L} 3.2837 - 2229 1 1.995 69464.9 0.3899999856948852 5274 3743 9016 DOHH2_400M_050219_2,9019 DOHH2_400M_050219_2,9019,FSEPSFITESY True True FSEPSFITESY 52.345884 653.795825183392 893067.5625 9016.0 ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;nc|ENSG00000134954|P14921-2|ETS1;;nc|ENSG00000134954|P14921-5|ETS1 5.579866727193196 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9022 52.364 675.0 77938.0 25 0 6471.4 + 45573 YVDVLSDDEE 10 64 592.2537533581126 1182.492953783025 2 592.2536498904228 MULTI CID FTMS 0 0 0 9021 58192.3828125 0.505401774606601 -1 0.0040664672851562 1 Unmodified _YVDVLSDDEE_ REV__ENSG00000148843|ENST00000369797|PDCD11 19.256988751693697 0.5244284437930726 2 YVD 3 -1 51.242 0.0 0.0 4.3334 0.0 0.0 0.0 802.3086985452995 802.3086985452995 27.941453415473205 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 YVD 4.3334 + + 39 + 1 1.995 43444.4 1.0 5275 3745 9021 DOHH2_400M_050219_2,9022 DOHH2_400M_050219_2,9022,YVDVLSDDEE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9023 52.378 800.0 258240.0 25 0 27761.0 + 10534 FVDPLVTNY 9 103 1067.5409271100289 1066.533650643429 1 1067.539965808392 MULTI CID FTMS 0 0 0 9021 136670.03125 0.37109433534483 -9 0.2312088012695312 2 Unmodified _FVDPLVTNY_ ENSG00000043514|ENST00000316891|TRIT1;ENST00000462243.2_1_1:40318401-40323020:-|nuORF;ENST00000486825.6_1_1:40315918-40341739:-|nuORF;nc|ENSG00000043514|Q9H3H1-4|TRIT1 118.0683919894846 0.0022886718041725 2 [{I|L}P]VD{M(Oxidation (M))|F}VTNY 9 4 + 100.44 0.0 0.0 9.4176 9.4176 86.036 0.0 0.0 0.0 20.536049848239344 16.478174818886373 16.478174818886373 3.0102999566398125 0 0.9802046884880936 1.6989700043360187 1.2530834337684311 0.3494850021680094 [{I|L}P]VD{M(Oxidation (M))|F}VTNY;[{I|L}P]DV{M(Oxidation (M))|F}VTNY;[{I|L}P]V{M(Oxidation (M))|F}DVTNY;[{I|L}P]VD{M(Oxidation (M))|F}TVNY;[{I|L}P]VDV{M(Oxidation (M))|F}TNY;[{I|L}P]VD{M(Oxidation (M))|F}VTGGY;[{I|L}P]DV{M(Oxidation (M))|F}TVNY;[{I|L}P]{M(Oxidation (M))|F}VDVTNY;[{I|L}P]DVV{M(Oxidation (M))|F}TNY;[{I|L}P]V{M(Oxidation (M))|F}DTVNY 9.4176;9.1354;8.9703;8.4614;8.3509;8.2266;8.1791;8.1235;8.0686;8.014 -;-;-;-;-;-;-;-;-;- 8409 1 1.995 132653.6 0.5 5276 3745 9021 DOHH2_400M_050219_2,9023 DOHH2_400M_050219_2,9023,FVDPLVTNY True True FVDPLVTNY 52.378107 1067.53996580839 8106261.0 9021.0 nc|ENSG00000043514|Q9H3H1-4|TRIT1;;ENSG00000043514|ENST00000316891|TRIT1;;ENST00000486825.6_1_1:40315918-40341739:-|nuORF;;ENST00000462243.2_1_1:40318401-40323020:-|nuORF 9.909825007120768 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9024 52.392 800.0 110310.0 25 0 5006.0 -1 0 93 796.7053260507475 2387.0941487524424 3 796.7054321169853 MULTI CID FTMS 0 0 0 9021 72460.6171875 0.9552132266771688 -15 0.4136505126953125 3 2 PPPPPP{[QN]|[E{I|L}]|[KN]} 8 -1 34.137 0.0 0.0 1.4301 0.0 0.0 1544.6650577393827 0.0 1544.6650577393827 0.0 4.285957665111184 0.0 0.0 0 0.0 0.0 0.0 1.5085820071949734 PPPPPP{[QN]|[E{I|L}]|[KN]} 1.4301 - 3208 + 1 1.995 70443.2 0.8799999952316284 5277 3745 9021 DOHH2_400M_050219_2,9024 DOHH2_400M_050219_2,9024, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9026 52.397 88.0 765760.0 25 0 88573.0 + 6908 EEFELLGKAY 10 83 599.8034246455604 1197.5922963579208 2 599.8032714724541 MULTI CID FTMS 0 0 0 9025 246183.0 0.4550274696521512 6 -0.0939102172851562 1 Unmodified _EEFELLGKAY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 43.77239144664712 0.1177314611616471 2 {M(Oxidation (M))|F}E{I|L}{I|L}GKAY 8 2 34.339 0.0 0.0 2.8673 0.0 0.0 258.0984962073712 0.0 258.0984962073712 0.0 18.14071999326629 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 + {M(Oxidation (M))|F}E{I|L}{I|L}GKAY 2.8673 + + 195 + 1 1.995 54745.2 1.0 5278 3746 9025 DOHH2_400M_050219_2,9026 DOHH2_400M_050219_2,9026,EEFELLGKAY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9027 52.401 247.0 217450.0 25 0 13819.0 + 4811 DEQTPIHISW 10 87 613.2960206139124 1224.5774882946248 2 613.2960082888603 MULTI CID FTMS 0 0 0 9025 205057.234375 0.0719095491407541 13 -0.185394287109375 2 Unmodified _DEQTPIHISW_ ENSG00000100526|ENST00000335183|CDKN3 53.40400417844725 0.0601721406801337 2 [H{I|L}]P{I|L}[YQ][DP]G{[DA]|[EG]} 11 10 + 31.789 0.0 0.0 2.5959 2.5959 70.131 0.0 0.0 0.0 1.8230617626549908 15.846783766776442 1.8230617626549908 4.247425010840047 0 0.4247425010840047 0.721246399047171 0.3807196863200844 0.0 [H{I|L}]P{I|L}[YQ][DP]G{[DA]|[EG]};[H{I|L}]P{I|L}[DP][YQ]G{[DA]|[EG]};[H{I|L}]P[DP]{I|L}[YQ]G{[DA]|[EG]};[H{I|L}]P{I|L}[NP][YE]G{[DA]|[EG]};[H{I|L}]P{I|L}[DP]S{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[DA]|[EG]};[H{I|L}]{I|L}P[YQ][DP]G{[DA]|[EG]};[H{I|L}]P[DP]{I|L}S{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[DA]|[EG]};[H{I|L}]P{I|L}S[DP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[DA]|[EG]};[H{I|L}]{I|L}P[DP][YQ]G{[DA]|[EG]};[H{I|L}]{I|L}P[NP][YE]G{[DA]|[EG]} 2.5959;2.2491;2.1657;2.0032;2.0032;1.9605;1.9199;1.7574;1.6136;1.3678 -;-;-;-;-;-;-;-;-;- 291 1 1.995 46301.0 1.0 5279 3746 9025 DOHH2_400M_050219_2,9027 DOHH2_400M_050219_2,9027,DEQTPIHISW True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9029 52.406 93.0 803540.0 25 0 157890.0 22798 LQTVTNYFIV 10 80 599.3315171349677 1196.6484813367354 2 599.3318359255791 MULTI CID FTMS 0 0 0 9028 381834.1875 1.0 0 0.0 1 Unmodified _LQTVTNYFIV_ ENSG00000171873|ENST00000379453|ADRA1D 10.898955630103616 0.6646681216928481 2 {I|L}[SG][{M(Oxidation (M))|F}E]{I|L}{I|L}GKAY 11 10 + 32.707 0.0 0.0 2.7333 2.7333 77.745 0.0 0.0 0.0 8.093185481980612 6.777585485147782 6.777585485147782 9.854098072537424 0 0.0 0.0 0.4247425010840047 0.0 {I|L}[SG][{M(Oxidation (M))|F}E]{I|L}{I|L}GKAY;[KQ][YN]{I|L}{I|L}GKAY;[KQ][YN]{I|L}{I|L}[KQ]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}E]{I|L}{I|L}[KQ]Y 2.7333;1.9098;1.2829;1.2019 -;-;-;- 143 + 1 1.995 60286.3 1.0 5280 3747 9028 DOHH2_400M_050219_2,9029 DOHH2_400M_050219_2,9029,LQTVTNYFIV False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9030 52.413 358.0 173540.0 25 0 22260.0 + 1224 AIHTAILTL 9 75 476.7950983703872 951.5756438075744 2 476.7950927615166 MULTI CID FTMS 0 0 0 9028 210742.078125 0.0827212641481494 13 -0.2108917236328125 2 Unmodified _AIHTAILTL_ ENSG00000106588|ENST00000223321|PSMA2 70.71552829651908 0.0208223590022201 2 [{I|L}T][HA]A{I|L}{I|L}T{I|L} 9 2 + 62.342 0.0 0.0 6.5514 6.5514 81.081 0.0 0.0 0.0 2.6218197888414494 10.330145895351848 2.6218197888414494 2.6218197888414494 0 0.8182503180159344 1.5228787452803376 1.579689690656103 0.0 [{I|L}T][HA]A{I|L}{I|L}T{I|L};[HT]A{I|L}A{I|L}{I|L}T{I|L};[{I|L}T][HA]{I|L}A{I|L}T{I|L};[HT]A{I|L}{I|L}A{I|L}T{I|L};[{I|L}T]{I|L}[HA]A{I|L}T{I|L};[H{I|L}]{I|L}{I|L}A[TA]T{I|L};[H{I|L}]{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L};[{I|L}T][HA]{I|L}[{I|L}T]A{I|L};[H{I|L}]{I|L}A{I|L}[TA]T{I|L};[HT]A{I|L}{I|L}[{I|L}T]A{I|L} 6.5514;6.2759;6.0921;5.8166;4.9903;3.2902;3.2421;2.7498;2.7185;2.4742 -;-;-;-;-;-;-;-;-;- 284 1 1.995 55047.8 1.0 5281 3747 9028 DOHH2_400M_050219_2,9030 DOHH2_400M_050219_2,9030,AIHTAILTL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9032 52.429 738.0 60972.0 25 0 2907.6 -1 0 62 1002.9755491717603 2003.9365454103208 2 1003.480883777142 MULTI CID FTMS 0 0 0 9031 60275.00390625 0.2294169570854247 9 -0.1346702575683593 1 2 [MN][NP]{I|L}NEE{[TV]|[{I|L}S]}G 11 -1 53.218 0.0 0.0 2.6557 0.0 0.0 0.0 802.3468111627561 802.3468111627561 21.33349815925779 0.0 0.0 0.0 0 0.75 1.5228787452803376 0.0 0.4247425010840047 [MN][NP]{I|L}NEE{[TV]|[{I|L}S]}G 2.6557 - 252 + 1 1.995 37712.8 1.0 5282 3748 9031 DOHH2_400M_050219_2,9032 DOHH2_400M_050219_2,9032, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9033 52.442 739.0 142880.0 25 0 11266.0 + 5331 DLFRKALEL 9 101 552.824447326289 1103.634341719378 2 552.8239623904228 MULTI CID FTMS 0 0 0 9031 94437.25 0.695327248168405 -2 0.0206375122070312 2 Unmodified _DLFRKALEL_ ENSG00000169189|ENST00000361439|NSMCE1;ENST00000565070.5_1_16:27237776-27268891:-|nuORF;ENST00000569236.5_1_16:27236480-27252833:-|nuORF 61.08992128646608 0.0254786290039527 2 {I|L}{M(Oxidation (M))|F}{I|L}AK{[SA]|[TG]}{I|L}E{I|L} 10 4 + 55.443 0.0 0.0 5.0237 5.0237 82.158 0.0 0.0 0.0 16.42159058960253 4.480844613864647 4.480844613864647 9.045160421606653 0 0.4247425010840047 0.0 1.2302046884880935 0.0 {I|L}{M(Oxidation (M))|F}{I|L}AK{[SA]|[TG]}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[KA]R{M(Oxidation (M))|F}VE{I|L};[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}R{M(Oxidation (M))|F}VE{I|L};{[TV]|[{I|L}S]}[Q{I|L}]R{M(Oxidation (M))|F}VE{I|L};{[QN]|[E{I|L}]|[KN]}[KA]R{M(Oxidation (M))|F}D{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[KA][VG]{M(Oxidation (M))|F}VE{I|L};{[QN]|[E{I|L}]|[KN]}[KA]R{M(Oxidation (M))|F}{I|L}D{I|L};[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}R{M(Oxidation (M))|F}D{I|L}{I|L};[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}[VG]{M(Oxidation (M))|F}VE{I|L};[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}R{M(Oxidation (M))|F}{I|L}D{I|L} 5.0237;4.2041;3.8499;3.5869;3.4707;3.3697;3.2258;3.1165;3.0155;2.8716 -;-;-;-;-;-;-;-;-;- 693 + 1 1.995 84089.4 1.0 5283 3748 9031 DOHH2_400M_050219_2,9033 DOHH2_400M_050219_2,9033,DLFRKALEL True True DLFRKALEL 52.442111 552.823962390423 775595.8125 9031.0 ENST00000565070.5_1_16:27237776-27268891:-|nuORF;;ENSG00000169189|ENST00000361439|NSMCE1;;ENST00000569236.5_1_16:27236480-27252833:-|nuORF 5.213084697723389 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9035 52.451 366.0 216320.0 25 0 33402.0 + 32692 SDWVRDVAW 9 78 567.272110346428 1132.529667759656 2 567.2723876833916 MULTI CID FTMS 0 0 0 9034 179248.015625 0.4016520644871572 7 -0.0866775512695312 1 Unmodified _SDWVRDVAW_ ENSG00000157020|ENST00000350697|SEC13;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 43.9818466556824 0.0535980856389242 2 {[DS]|[MA]|[CV]|TT}WVRDVAW 9 0 + 49.319 0.0 0.0 4.3548 4.3548 85.467 0.0 0.0 0.0 4.137342758552691 28.05970632012567 4.137342758552691 29.43182128828236 0 2.1237125054200234 0.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}WVRDVAW;{[CT]|[{M(Oxidation (M))|F}G]}A[C(Carbamidomethyl (C))S][HV]VA[VS];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[C(Carbamidomethyl (C))S][HV]VA[VS];{[DS]|[MA]|[CV]|TT}WVR{[RE]|[WV]}{[DA]|[EG]} 4.3548;1.756;1.6046;1.1336 +;-;-;- + 102 1 1.995 63494.8 1.0 5284 3749 9034 DOHH2_400M_050219_2,9035 DOHH2_400M_050219_2,9035,SDWVRDVAW True True SDWVRDVAW 52.451259 567.272387683392 5164576.5 9034.0 ENSG00000157020|ENST00000350697|SEC13;;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;;nc|ENSG00000157020|P55735-2|SEC13;;nc|ENSG00000157020|P55735-4|SEC13;;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;;nc|ENSG00000157020|P55735-3|SEC13 8.982599576314291 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9036 52.463 692.0 134980.0 25 0 12650.0 + 45563 YVDPQFLTY 9 107 573.2792607719726 1144.5439686107452 2 573.2794677615166 MULTI CID FTMS 0 0 0 9034 158445.6875 0.3435558154489134 4 -0.0477714538574218 2 Unmodified _YVDPQFLTY_ ENSG00000181191|ENST00000374571|PJA1;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;nc|ENSG00000181191|Q8NG27|PJA1;nc|ENSG00000198961|O43164-2|PJA2 29.081581746732265 0.1611639662936252 2 [QP]{M(Oxidation (M))|F}{I|L}DYVTY 9 6 + 49.976 0.0 0.0 4.3665 4.3665 52.997 0.0 0.0 0.0 6.473439281990196 10.330145895351848 6.473439281990196 0.0 0 0.8182503180159344 0.7958800173440752 0.0 0.2742275032520141 [QP]{M(Oxidation (M))|F}{I|L}DYVTY;[QP]{M(Oxidation (M))|F}{I|L}YDVTY;[QP]{M(Oxidation (M))|F}D{I|L}YVTY;[AG]P{M(Oxidation (M))|F}{I|L}DYVTY;[AG]P{M(Oxidation (M))|F}{I|L}YDVTY;[QP]D{M(Oxidation (M))|F}{I|L}YVTY;[QP]{M(Oxidation (M))|F}{[ET]|[MV]}{M(Oxidation (M))|F}{I|L}TY;[YV]D[QP]{M(Oxidation (M))|F}{I|L}TY;[AG]P{M(Oxidation (M))|F}D{I|L}YVTY;[QP]{M(Oxidation (M))|F}D[YV]{I|L}TY 4.3665;4.3665;4.1034;3.8009;3.8009;3.7312;3.6711;3.5407;3.5379;3.4081 -;-;-;-;-;-;-;+;-;- + 1216 1 1.995 78206.8 1.0 5285 3749 9034 DOHH2_400M_050219_2,9036 DOHH2_400M_050219_2,9036,YVDPQFLTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9037 52.471 407.0 152650.0 25 0 12880.0 + 11172 GELPRGWNW 9 73 557.7751061752487 1113.5356594172972 2 557.7753173708916 MULTI CID FTMS 0 0 0 9034 104640.5625 0.3663224681123677 -12 0.2848625183105469 3 Unmodified _GELPRGWNW_ ENSG00000182552|ENST00000326397|RWDD4;ENST00000426392.1_1_7:39894095-39894470:-|nuORF;ENST00000488019.1_1_7:104942431-104942530:+|nuORF;nc|ENSG00000182552|Q6NW29-2|RWDD4 62.57269311338072 0.0246576765497938 2 {[DA]|[EG]}{I|L}RT[KQ]N 8 5 42.227 0.0 0.0 3.7922 0.0 0.0 0.0 184.0407808893188 184.0407808893188 9.448012036375886 0.0 0.0 0.0 0 1.3851518780601924 1.3010299956639813 0.4247425010840047 1.25 {[DA]|[EG]}{I|L}RT[KQ]N 3.7922 - 226 + 1 1.995 50893.8 1.0 5286 3749 9034 DOHH2_400M_050219_2,9037 DOHH2_400M_050219_2,9037,GELPRGWNW True True GELPRGWNW 52.470565 557.775317370892 4153459.75 9034.0 ENST00000488019.1_1_7:104942431-104942530:+|nuORF;;ENST00000426392.1_1_7:39894095-39894470:-|nuORF;;ENSG00000182552|ENST00000326397|RWDD4;;nc|ENSG00000182552|Q6NW29-2|RWDD4 6.83148733774821 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9040 52.486 490.0 328180.0 25 0 27869.0 -1 0 110 914.4363438052202 1826.8581346772403 2 914.9379760622978 MULTI CID FTMS 0 0 0 9039 182890.21875 0.2703004519165718 -10 0.2064895629882812 1 2 QY{M(Oxidation (M))|F}ANQQA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 13 -1 96.007 0.0 0.0 5.2553 0.0 0.0 230.1655844605221 0.0 230.1655844605221 0.0 88.04808857094062 0.0 0.0 0 1.079689690656103 0.0 0.0 1.5994850021680094 QY{M(Oxidation (M))|F}ANQQA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 5.2553 - 3533 + 1 1.995 107431.9 1.0 5287 3751 9039 DOHH2_400M_050219_2,9040 DOHH2_400M_050219_2,9040, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9044 52.511 767.0 131250.0 25 0 31159.0 + 9214 FGHPEVYIL 9 97 537.7841482035716 1073.553743473943 2 537.7842895388603 MULTI CID FTMS 0 0 0 9043 63823.91015625 0.1994655946737948 -6 0.0811653137207031 1 Unmodified _FGHPEVYIL_ ENSG00000198804|ENST00000361624|MT-CO1 28.486842064014134 0.1687311288560894 2 [Y{I|L}]WG{M(Oxidation (M))|F}Y{I|L}{I|L} 8 6 + 49.914 0.0 0.0 4.6494 4.6494 73.554 0.0 0.0 0.0 5.862657241447309 16.40978057358332 5.862657241447309 2.340832060333682 0 0.5 1.6989700043360187 0.0 0.0 [Y{I|L}]WG{M(Oxidation (M))|F}Y{I|L}{I|L};[Y{I|L}]WYG{M(Oxidation (M))|F}{I|L}{I|L};[Y{I|L}][DP]HG{M(Oxidation (M))|F}{I|L}{I|L};[EP]VYHG{M(Oxidation (M))|F}{I|L}{I|L};[Y{I|L}]WGY{M(Oxidation (M))|F}{I|L}{I|L};[EP]VHG{M(Oxidation (M))|F}Y{I|L}{I|L};[EP]VHYG{M(Oxidation (M))|F}{I|L}{I|L};[Y{I|L}]W{[ET]|[MV]}H{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]VY{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]YV{I|L}{I|L} 4.6494;4.4314;4.2197;4.1033;4.0886;3.6703;3.4522;3.4096;3.203;3.203 -;-;-;-;-;-;-;-;-;- 455 1 1.995 82499.1 1.0 5288 3754 9043 DOHH2_400M_050219_2,9044 DOHH2_400M_050219_2,9044,FGHPEVYIL False True FGHPEVYIL 52.510902 537.78428953886 3949922.25 9043.0 ENSG00000198804|ENST00000361624|MT-CO1 5.668209711710612 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9045 52.525 800.0 118320.0 25 0 17771.0 34032 SLKIRGIHAKE 11 81 626.3799537730926 1250.745354612985 2 626.3795654177666 MULTI CID FTMS 0 0 0 9043 91082.8125 0.944663078190466 -3 0.0191230773925781 2 Unmodified _SLKIRGIHAKE_ ENSG00000146426|ENST00000682666|TIAM2;nc|ENSG00000146426|Q8IVF5-2|TIAM2;nc|ENSG00000146426|Q8IVF5-5|TIAM2 4.5288652416199255 0.8537804541365391 2 Y 1 11 11.259 0.0 0.0 0.90019 0.0 0.0 1069.6703404301709 0.0 1069.6703404301709 0.0 5.774509799928715 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.90019 - 16 + 1 1.995 72746.7 0.4099999964237213 5289 3754 9043 DOHH2_400M_050219_2,9045 DOHH2_400M_050219_2,9045,SLKIRGIHAKE False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9048 52.535 202.0 344060.0 25 0 35977.0 + 851 AETPDIKLF 9 91 517.2816068735767 1032.5486608139531 2 517.2820312380791 MULTI CID FTMS 0 0 0 9047 347421.4375 0.0112361876027413 36 -0.45489501953125 1 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 30.7034409873982 0.1405282614900322 2 [DP]{I|L}K{I|L}TEA{M(Oxidation (M))|F} 9 6 + 50.582 0.0 0.0 4.8988 4.8988 77.337 0.0 0.0 0.0 4.501962355242952 4.501962355242952 4.501962355242952 4.501962355242952 0 0.218765315847925 1.0 0.7302046884880937 0.0 [DP]{I|L}K{I|L}TEA{M(Oxidation (M))|F};{[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}TPD{I|L}K{M(Oxidation (M))|F}{I|L};[DP]{I|L}KT{I|L}EA{M(Oxidation (M))|F};[DP]{I|L}TK{I|L}EA{M(Oxidation (M))|F};[DP]T{I|L}K{I|L}EA{M(Oxidation (M))|F};[K{I|L}]{I|L}DPTEA{M(Oxidation (M))|F};[TP]D{I|L}K{I|L}EA{M(Oxidation (M))|F};[K{I|L}][DP]{I|L}TEA{M(Oxidation (M))|F};{[CP]|[EA]}TP{I|L}{I|L}{I|L}[YN] 4.8988;4.4628;4.0297;3.8531;3.4912;3.3249;3.1767;2.6698;2.4059;1.997 -;+;-;-;-;-;-;-;-;- + 369 1 1.995 60515.4 1.0 5290 3756 9047 DOHH2_400M_050219_2,9048 DOHH2_400M_050219_2,9048,AETPDIKLF False True AETPDIKLF 52.535217 517.282031238079 1259689920.0 9047.0 ENSG00000083845|ENST00000196551|RPS5;;ENST00000599909.1_1_19:58899504-58899627:+|nuORF;;ENST00000598807.1_1_19:58899504-58905010:+|nuORF 7.755760669708252 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9049 52.547 693.0 153590.0 25 0 26143.0 + 43470 WVDSDQLLY 9 127 569.77433283857 1137.53411274394 2 569.7763549685478 MULTI CID FTMS 0 0 0 9047 129347.8203125 0.2348809442472946 -7 0.0866775512695312 2 Unmodified _WVDSDQLLY_ ENSG00000116221|ENST00000360840|MRPL37 74.42276476219924 0.019389277360085 2 {[RE]|[WV]}DSDQ{I|L}{I|L}Y 9 0 + 74.891 0.0 0.0 6.5836 6.5836 87.569 0.0 0.0 0.0 10.339322000954269 11.0827208845118 10.339322000954269 8.742209500285014 0 0.8935078169319297 1.6989700043360187 0.9802046884880936 1.4604093769761874 + + {[RE]|[WV]}DSDQ{I|L}{I|L}Y;{[RE]|[WV]}DSA[DG]{I|L}{I|L}Y;{[RE]|[WV]}DSD[AG]{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}QMDQ{I|L}{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}QSDWV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}QSDVW{I|L}Y;{[RE]|[WV]}DSA{[DA]|[EG]}V{I|L}Y;{[RE]|[WV]}DSDAAV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}QMA[DG]{I|L}{I|L}Y;{[RE]|[WV]}DSAV{[DA]|[EG]}{I|L}Y 6.5836;5.8151;5.7742;5.6747;5.2974;5.2112;4.9561;4.9152;4.9062;4.8699 +;-;-;-;-;-;-;-;-;- + 2579 1 1.995 84361.9 1.0 5291 3756 9047 DOHH2_400M_050219_2,9049 DOHH2_400M_050219_2,9049,WVDSDQLLY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9051 52.552 61.0 833900.0 25 0 99479.0 + 40986 VMAPRTLLL 9 55 507.3123951781496 1012.6102374230992 2 507.3125488162041 MULTI CID FTMS 0 0 0 9050 778986.625 0.9133805215621305 2 -0.0300865173339843 1 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 32.78568957990786 0.1150597335874693 2 VMA 3 6 55.445 0.0 0.0 5.4755 0.0 0.0 0.0 708.441194096773 708.441194096773 18.46279041616178 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMA 5.4755 + + 55 + 1 1.995 44619.6 1.0 5292 3757 9050 DOHH2_400M_050219_2,9051 DOHH2_400M_050219_2,9051,VMAPRTLLL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9052 52.554 64.0 878100.0 25 0 110170.0 + 40644 VLDPYLLKY 9 78 562.3235360927615 1122.632519252323 2 562.3236572146416 MULTI CID FTMS 0 0 0 9050 691734.0625 0.6449515354489102 8 -0.1440544128417968 2 Unmodified _VLDPYLLKY_ ENSG00000239789|ENST00000285298|MRPS17 43.85829265575387 0.0542763391141878 2 [{I|L}V]DPY{I|L}{I|L}KY 9 0 + 69.792 0.0 0.0 6.2168 6.2168 93.198 0.0 0.0 0.0 27.39577516576788 13.46787486224656 13.46787486224656 38.4188256147155 0 0.7742275032520141 2.0 0.4247425010840047 0.0 + + [{I|L}V]DPY{I|L}{I|L}KY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}D{I|L}[YK][{I|L}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}{I|L}[YK][{I|L}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}D[YK][{I|L}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}K{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}V];[DP]Y{I|L}{I|L}[YK][{I|L}V] 6.2168;2.7946;2.5264;2.5264;2.2583;1.9652 +;-;-;-;-;- + 238 + 1 1.995 57471.1 1.0 5293 3757 9050 DOHH2_400M_050219_2,9052 DOHH2_400M_050219_2,9052,VLDPYLLKY True True VLDPYLLKY 52.553618 562.323657214642 20716530.0 9050.0 ENSG00000239789|ENST00000285298|MRPS17 7.514914035797119 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9054 52.57 800.0 154480.0 25 0 20281.0 + 36834 TELFRDSGTMW 11 92 671.8087713159949 1341.6029896987898 2 671.8081542849541 MULTI CID FTMS 0 0 0 9053 119769.6875 0.899686112334061 -1 0.0063629150390625 1 Unmodified _TELFRDSGTMW_ ENSG00000108651|ENST00000261708|UTP6 74.7717668357584 0.0185759530880285 2 {[ET]|[MV]}{I|L}{M(Oxidation (M))|F}RDSGTMW 11 0 + 71.96 0.0 0.0 5.3637 5.3637 82.653 0.0 0.0 0.0 8.036502144102904 9.128498242811006 8.036502144102904 8.036502144102904 0 2.079689690656103 0.0 1.3494850021680094 0.0 + + {[ET]|[MV]}{I|L}{M(Oxidation (M))|F}RDSGTMW;[{I|L}P]V{M(Oxidation (M))|F}{[CA]|SS}MSGTMW;[{I|L}P]V{M(Oxidation (M))|F}D[YN]GTMW;{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}RD[MN]MW;[MT]{M(Oxidation (M))|F}GGSDR{M(Oxidation (M))|F}{I|L}[DP];{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}RDSGTS{[ET]|[MV]};[MT]{M(Oxidation (M))|F}NSDR{M(Oxidation (M))|F}{I|L}[DP];{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}R[KC]EMW;{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}R{[QC]|[C(Carbamidomethyl (C))A]}EMW;{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}R{[CA]|SS}WMW 5.3637;4.7647;4.6275;4.056;4.0282;3.6755;3.5354;3.535;3.535;3.476 +;-;-;-;-;-;-;-;-;- + 593 1 1.995 93609.4 0.4300000071525574 5294 3758 9053 DOHH2_400M_050219_2,9054 DOHH2_400M_050219_2,9054,TELFRDSGTMW True True TELFRDSGTMW 52.57 671.808154284954 775416.75 9053.0 ENSG00000108651|ENST00000261708|UTP6 8.366972287495932 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9055 52.577 411.0 113400.0 25 0 10524.0 + 25461 NEIEDTFRQF 10 57 649.8034681499764 0 649.8040649294853 PEAK CID FTMS 0 0 0 9053 88450.546875 0.8441361101414256 9 -0.1579437255859375 2 Unmodified _NEIEDTFRQF_ ENSG00000128524|ENST00000249289|ATP6V1F 43.9818466556824 0.0820936144366115 2 {I|L}EDT{M(Oxidation (M))|F} 5 5 46.454 0.0 0.0 3.58 0.0 0.0 243.08482028366265 446.2167147272094 689.301535010872 0.0 0.0 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.0 + {I|L}EDT{M(Oxidation (M))|F} 3.58 + + 33 + 1 1.995 44249.1 1.0 5295 3758 9053 DOHH2_400M_050219_2,9055 DOHH2_400M_050219_2,9055,NEIEDTFRQF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9057 52.585 179.0 378850.0 25 0 20917.0 + 10533 FVDPLVTNY 9 106 534.2741650227597 1066.5337771123193 2 534.2739135622978 MULTI CID FTMS 0 0 0 9056 325876.40625 0.8851705792231465 3 -0.0904541015625 1 Unmodified _FVDPLVTNY_ ENSG00000043514|ENST00000316891|TRIT1;ENST00000462243.2_1_1:40318401-40323020:-|nuORF;ENST00000486825.6_1_1:40315918-40341739:-|nuORF;nc|ENSG00000043514|Q9H3H1-4|TRIT1 46.020951573049366 0.0490941689151868 2 [{I|L}P]DV{M(Oxidation (M))|F}V 6 7 36.348 0.0 0.0 3.4081 0.0 0.0 0.0 393.14023799713135 393.14023799713135 14.3360688456422 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.0 0.0 [{I|L}P]DV{M(Oxidation (M))|F}V 3.4081 - 240 1 1.995 60633.9 1.0 5296 3759 9056 DOHH2_400M_050219_2,9057 DOHH2_400M_050219_2,9057,FVDPLVTNY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9058 52.598 793.0 117150.0 25 0 7712.4 + 32983 SENAIVWKI 9 111 530.2952753893187 1058.575997845437 2 530.2950927615166 MULTI CID FTMS 0 0 0 9056 112929.5 0.9299862351514792 -2 0.0300865173339843 2 Unmodified _SENAIVWKI_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000461733.5_1_3:183898306-183901401:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 107.1870275148908 0.0071859432680538 2 {[ES]|[DT]|[{I|L}C]}NA{I|L}VWK{I|L} 9 0 + 64.689 0.0 0.0 6.111 6.111 78.427 0.0 0.0 0.0 7.147642715192504 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 1.4802046884880935 0.0 0.0 0.3054621874040891 + + {[ES]|[DT]|[{I|L}C]}NA{I|L}VWK{I|L};{[ES]|[DT]|[{I|L}C]}NA{I|L}VW{I|L}K;{[ES]|[DT]|[{I|L}C]}GGA{I|L}VWK{I|L};{[ES]|[DT]|[{I|L}C]}GGA{I|L}VW{I|L}K;{[ES]|[DT]|[{I|L}C]}NA{I|L}V[K{I|L}]W;{[ES]|[DT]|[{I|L}C]}GGA{I|L}V[K{I|L}]W;{[ES]|[DT]|[{I|L}C]}NVV[RD]K{I|L};{[ES]|[DT]|[{I|L}C]}NVV[RD]{I|L}K 6.111;5.9446;5.2411;5.0748;4.3027;3.4328;1.4449;1.2785 +;-;-;-;-;-;-;- + 221 + 1 1.995 76180.3 1.0 5297 3759 9056 DOHH2_400M_050219_2,9058 DOHH2_400M_050219_2,9058,SENAIVWKI True True SENAIVWKI 52.598406 530.295092761517 611833.875 9056.0 ENST00000461733.5_1_3:183898306-183901401:+|nuORF;;nc|ENSG00000161203|Q96CW1-2|AP2M1;;ENSG00000161203|ENST00000292807|AP2M1 6.975658257802327 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9059 52.612 800.0 102210.0 25 0 40687.0 -1 SHLCLHLC 8 33 982.4620989950891 981.4548225284892 1 982.4615966677666 MULTI CID FTMS 0 0 0 9056 93191.296875 0.7677110342187072 2 -0.0513076782226562 3 Carbamidomethyl (C) _SHLCLHLC(Carbamidomethyl (C))_ ENST00000399683.7_1_20:3734265-3734637:-|nuORF 19.438996006549623 0.6237395211498085 2 [HC]{I|L}{I|L}SHSW 8 -1 + 48.594 0.0 0.0 4.9512 4.9512 85.033 0.0 0.0 0.0 25.8771376077312 11.721675119240516 11.721675119240516 11.023050448947622 0 1.6237125054200234 0.0 0.7742275032520141 0.0 [HC]{I|L}{I|L}SHSW;{[QG]|[NA]}[PA]{I|L}SHSW;[HS]S[NP][RV]{[DA]|[EG]} 4.9512;3.8281;0.5784 -;-;- 65 + 1 1.995 64566.0 0.4000000059604645 5298 3759 9056 DOHH2_400M_050219_2,9059 DOHH2_400M_050219_2,9059,SHLCLHLC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9061 52.629 800.0 49504.0 25 0 5945.3 -1 0 51 1194.5516904212209 2387.088827909242 2 1194.553637683392 MULTI CID FTMS 0 0 0 9060 55785.125 0.644402221282459 1 -0.0164031982421875 1 2 PPPP 4 -1 26.186 0.0 0.0 1.097 0.0 0.0 1544.6595239135168 451.1951693170532 1995.8546932305696 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PPPP 1.097 - 60 + 1 1.995 32663.4 0.3700000047683716 5299 3760 9060 DOHH2_400M_050219_2,9061 DOHH2_400M_050219_2,9061, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9063 52.645 800.0 105560.0 25 0 5226.3 -1 0 90 796.7053260507475 2387.0941487524424 3 797.0391723513603 MULTI CID FTMS 0 0 0 9062 93389.828125 0.9086234298387214 1 -0.0391464233398437 1 2 {[HG]|PP}YPPPPP 8 -1 32.115 0.0 0.0 1.3454 0.0 0.0 0.0 1541.6416693292351 1541.6416693292351 14.65849638449249 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}YPPPPP 1.3454 - 1127 1 1.995 67147.7 0.9200000166893004 5300 3761 9062 DOHH2_400M_050219_2,9063 DOHH2_400M_050219_2,9063, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9064 52.654 501.0 111710.0 25 0 6559.3 -1 0 63 966.9642085988252 1931.9138642644505 2 967.4645873904228 MULTI CID FTMS 0 0 0 9062 117737.8671875 0.0973597629448595 -19 0.3192100524902344 2 2 [MN]PN{I|L}NADQR[PG]{[DA]|[EG]}N{I|L} 16 -1 83.573 0.0 0.0 4.3259 0.0 0.0 0.0 208.0731142633422 208.0731142633422 53.18163502828014 0.0 0.0 0.0 0 0.6747425010840047 1.5228787452803376 0.0 0.805462187404089 [MN]PN{I|L}NADQR[PG]{[DA]|[EG]}N{I|L} 4.3259 - 488 + 1 1.995 46190.0 1.0 5301 3761 9062 DOHH2_400M_050219_2,9064 DOHH2_400M_050219_2,9064, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9065 52.668 800.0 43312.0 25 0 1830.0 -1 0 61 1023.8466448529838 3068.518105159151 3 1024.522631824017 MULTI CID FTMS 0 0 0 9062 77012.28125 0.7920903237522509 -4 0.0813941955566406 3 2 NYYNP 5 -1 13.276 0.0 0.0 0.43266 0.0 0.0 1784.9146638523137 629.2812594049436 2414.195923257257 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NYYNP 0.43266 - 158 + 1 1.995 33663.8 0.3499999940395355 5302 3761 9062 DOHH2_400M_050219_2,9065 DOHH2_400M_050219_2,9065, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9068 52.677 131.0 376690.0 25 0 48647.0 + 7897 ELNPKILAL 9 67 505.81536005406736 1009.6161671749348 2 505.8159362673759 MULTI CID FTMS 0 0 0 9067 447189.4375 0.8197526889604825 -4 0.0945205688476562 1 Unmodified _ELNPKILAL_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 46.020951573049366 0.0490941689151868 2 E{I|L}{I|L}HA{I|L} 6 4 28.198 0.0 0.0 2.7929 0.0 0.0 315.21566161649224 0.0 315.21566161649224 0.0 9.948500216800934 0.0 0.0 0 0.0 0.0 0.5 0.0 E{I|L}{I|L}HA{I|L} 2.7929 - 285 + 1 1.995 42695.6 1.0 5303 3763 9067 DOHH2_400M_050219_2,9068 DOHH2_400M_050219_2,9068,ELNPKILAL True True ELNPKILAL 52.67707 505.815936267376 2493153.0 9067.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 5.399999141693115 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9069 52.687 579.0 204140.0 25 0 8464.3 -1 0 115 973.972445422161 1945.9303379111216 2 973.973681628704 MULTI CID FTMS 0 0 0 9067 167065.078125 0.312783247012106 -10 0.1819686889648437 2 2 [MN]PN{I|L}NEAQRD{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q{[TV]|[{I|L}S]} 17 -1 + 81.827 0.0 0.0 4.205 4.205 75.565 0.0 0.0 0.0 13.580296023901257 7.458320199781895 7.458320199781895 5.528419686577806 0 2.659379381312206 1.5228787452803376 0.5 1.4489700043360187 [MN]PN{I|L}NEAQRD{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q{[TV]|[{I|L}S]};[MN]PN{I|L}NEAQ[KT][MD]{I|L}Q{[TV]|[{I|L}S]};[MN]PN{I|L}NEA[HV]Y{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q{[TV]|[{I|L}S]};[MN]PN{I|L}NEA{M(Oxidation (M))|F}[{I|L}P][MD]{I|L}Q{[TV]|[{I|L}S]};[NP]{I|L}NEA[RK]DG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]VQEA[RK]DG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]PN{I|L}NEAQRD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{[QN]|[E{I|L}]|[KN]};[NP]{I|L}NM[HT]{[ET]|[MV]}G{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[NP]G{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]PN{I|L}NEAQRD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AG{[QN]|[E{I|L}]|[KN]} 4.205;3.9209;3.6823;3.6757;3.4912;3.2723;3.2016;3.0442;3.0442;3.0333 -;-;-;-;-;-;-;-;-;- 10245 + 1 1.995 81534.1 1.0 5304 3763 9067 DOHH2_400M_050219_2,9069 DOHH2_400M_050219_2,9069, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9073 52.712 800.0 85553.0 25 0 7512.7 19224 LEGVPRFL 8 84 465.7743767118957 929.5342004905916 2 465.7738830447197 MULTI CID FTMS 0 0 0 9072 100266.921875 0.8209255396776824 -4 0.02740478515625 1 Unmodified _LEGVPRFL_ CIITA|p.L1020Sfs*30|1|0.33|ENSG00000179583|chr16:10916453-10916453|C/-|frameshift_variant;ENSG00000179583|ENST00000324288|CIITA;ENST00000570546.5_1_16:10971115-11002148:+|nuORF;ENST00000573309.5_1_16:10971115-11002148:+|nuORF;nc|ENSG00000092068|Q9UHI5-4|SLC7A8;nc|ENSG00000179583|P33076-2|CIITA;nc|ENSG00000179583|P33076-4|CIITA;nc|ENSG00000179583|P33076|CIITA 19.438996006549623 0.6237395211498085 2 {[QN]|[E{I|L}]|[KN]}G 3 5 31.84 0.0 0.0 3.4253 0.0 0.0 0.0 627.3614596002561 627.3614596002561 17.235586057489325 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 + {[QN]|[E{I|L}]|[KN]}G 3.4253 + + 95 + 1 1.995 59860.2 0.3899999856948852 5305 3766 9072 DOHH2_400M_050219_2,9073 DOHH2_400M_050219_2,9073,LEGVPRFL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9075 52.72 314.0 154730.0 25 0 12438.0 + 11173 GELPRGWNW 9 73 557.7751061752487 1113.5356594172972 2 557.7751953005791 MULTI CID FTMS 0 0 0 9074 178045.328125 0.6232956176494785 6 -0.0489425659179687 1 Unmodified _GELPRGWNW_ ENSG00000182552|ENST00000326397|RWDD4;ENST00000426392.1_1_7:39894095-39894470:-|nuORF;ENST00000488019.1_1_7:104942431-104942530:+|nuORF;nc|ENSG00000182552|Q6NW29-2|RWDD4 30.63653989081413 0.1413794767160703 2 {[DA]|[EG]}{I|L}W 4 5 25.49 0.0 0.0 2.2891 0.0 0.0 0.0 625.2879732721311 625.2879732721311 0.0 0.0 0.0 0.0 0 0.3807196863200844 1.3010299956639813 0.0 0.0 {[DA]|[EG]}{I|L}W 2.2891 - 50 + 1 1.995 40643.8 1.0 5306 3767 9074 DOHH2_400M_050219_2,9075 DOHH2_400M_050219_2,9075,GELPRGWNW False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9079 52.734 165.0 429630.0 25 0 49157.0 -1 0 59 914.4363438052202 1826.8581346772403 2 914.9379150271416 MULTI CID FTMS 0 0 0 9078 381230.15625 0.563434634300804 9 -0.1023826599121093 1 2 [YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}YE 13 -1 78.691 0.0 0.0 4.3075 0.0 0.0 0.0 226.13717377188928 226.13717377188928 53.004991921373545 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.0 0.7742275032520141 [YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}YE 4.3075 - 658 1 1.995 54564.0 1.0 5307 3770 9078 DOHH2_400M_050219_2,9079 DOHH2_400M_050219_2,9079, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9082 52.754 800.0 11238.0 25 0 926.23 -1 0 27 997.4401733279228 0 997.4401733279228 PEAK CID FTMS 0 0 0 -1 0 1 2 W 1 -1 5.4846 0.0 0.0 0.27521 0.0 0.0 1177.460106322058 626.2841280572874 1803.7442343793448 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.27521 - 1 + 1 1.995 15941.0 0.3199999928474426 5308 3772 9081 DOHH2_400M_050219_2,9082 DOHH2_400M_050219_2,9082, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9083 52.76 366.0 214590.0 25 0 41248.0 + -1 AENPFLTHL 9 87 521.2967426618815 520.2894661952814 1 521.2971679568291 MULTI CID FTMS 0 0 0 9081 138354.453125 0.6974549432410588 1 -0.0230064392089843 2 ENSG00000163932|ENST00000330452|PRKCD;nc|ENSG00000163932|Q05655-2|PRKCD 2 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L} 4 -1 + 40.961 0.0 0.0 7.8727 7.8727 85.737 0.0 0.0 0.0 3.788624837399297 3.788624837399297 3.788624837399297 3.788624837399297 0 0.3054621874040891 0.9208187539523752 0.25 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L} 7.8727;7.1445;5.377 -;-;- 50 1 1.995 65804.8 1.0 5309 3772 9081 DOHH2_400M_050219_2,9083 DOHH2_400M_050219_2,9083, False False AENPFLTHL 52.760494 521.297167956829 342720.34375 9081.0 ENSG00000163932|ENST00000330452|PRKCD;;nc|ENSG00000163932|Q05655-2|PRKCD 5.3576553662618 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9085 52.77 290.0 155250.0 25 0 33004.0 + 9215 FGHPEVYIL 9 61 537.7841482035716 1073.553743473943 2 537.7842895388603 MULTI CID FTMS 0 0 0 9084 127714.953125 0.3991409960851376 13 -0.1614494323730468 1 Unmodified _FGHPEVYIL_ ENSG00000198804|ENST00000361624|MT-CO1 21.74664581756881 0.2544899275067181 2 VY{I|L}{I|L} 4 5 39.68 0.0 0.0 3.6962 0.0 0.0 567.24321181465 0.0 567.24321181465 0.0 31.60850666067283 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + VY{I|L}{I|L} 3.6962 + + 106 1 1.995 45317.5 1.0 5310 3773 9084 DOHH2_400M_050219_2,9085 DOHH2_400M_050219_2,9085,FGHPEVYIL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9090 52.789 246.0 176550.0 25 0 15780.0 + 852 AETPDIKLF 9 72 517.2816068735767 1032.5486608139531 2 517.2819091677666 MULTI CID FTMS 0 0 0 9089 168494.171875 0.0054493819920253 57 -0.699188232421875 1 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 24.881564428377168 0.2146028316269493 2 {[CP]|[EA]}TPD{I|L}[K{I|L}]{M(Oxidation (M))|F} 9 0 + 35.569 0.0 0.0 3.4447 3.4447 82.258 0.0 0.0 0.0 4.811442805080056 1.082720884511808 1.082720884511808 24.43697499232713 0 0.9247425010840048 0.0 0.0 0.0 + + {[CP]|[EA]}TPD{I|L}[K{I|L}]{M(Oxidation (M))|F};{[CP]|[EA]}T[YV]{I|L}[{I|L}A][PG] 3.4447;1.0781 +;- + 194 + 1 1.995 38724.0 1.0 5311 3777 9089 DOHH2_400M_050219_2,9090 DOHH2_400M_050219_2,9090,AETPDIKLF False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9091 52.803 800.0 123200.0 25 0 20836.0 39352 VAGHPHRIGL 10 95 528.805973711587 1055.5973944899738 2 528.8062621951103 MULTI CID FTMS 0 0 0 9089 104939.0546875 1.0 0 0.0 2 Unmodified _VAGHPHRIGL_ ENSG00000146755|ENST00000333149|TRIM50;nc|ENSG00000146755|Q86XT4-2|TRIM50 34.10243960390752 0.2198439752719791 2 N{I|L}{I|L}G{I|L} 5 7 47.691 0.0 0.0 4.5179 0.0 0.0 527.2684803693375 0.0 527.2684803693375 0.0 28.086681479559203 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3494850021680094 N{I|L}{I|L}G{I|L} 4.5179 - 48 1 1.995 79211.4 0.9300000071525574 5312 3777 9089 DOHH2_400M_050219_2,9091 DOHH2_400M_050219_2,9091,VAGHPHRIGL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9092 52.817 800.0 59967.0 25 0 4978.4 -1 0 78 644.9794311134569 1931.9164639405708 3 644.9796020388603 MULTI CID FTMS 0 0 0 9089 87608.8828125 1.0 0 0.0 3 2 Q{I|L}{M(Oxidation (M))|F}G 4 -1 19.553 0.0 0.0 1.0121 0.0 0.0 463.2119229693138 1020.4523409479124 1483.6642639172262 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L}{M(Oxidation (M))|F}G 1.0121 - 240 + 1 1.995 48133.6 0.3600000143051147 5313 3777 9089 DOHH2_400M_050219_2,9092 DOHH2_400M_050219_2,9092, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9094 52.824 236.0 149990.0 25 0 31032.0 + 43471 WVDSDQLLY 9 56 569.77433283857 1137.53411274394 2 569.7745849490166 MULTI CID FTMS 0 0 0 9093 212571.765625 0.3860061724247667 15 -0.1712150573730468 1 Unmodified _WVDSDQLLY_ ENSG00000116221|ENST00000360840|MRPL37 39.957323273325 0.0756908302845263 2 {[RE]|[WV]}D{[SA]|[TG]}[DG]{I|L}{I|L}Y 10 2 + 38.362 0.0 0.0 3.3724 3.3724 82.87 0.0 0.0 0.0 6.679987112256214 18.071968632008435 6.679987112256214 38.36242476018043 0 0.8935078169319297 1.5228787452803376 0.0 0.805462187404089 {[RE]|[WV]}D{[SA]|[TG]}[DG]{I|L}{I|L}Y 3.3724 - 60 1 1.995 34915.9 1.0 5314 3778 9093 DOHH2_400M_050219_2,9094 DOHH2_400M_050219_2,9094,WVDSDQLLY True True WVDSDQLLY 52.823529 569.774584949017 6778191.5 9093.0 ENSG00000116221|ENST00000360840|MRPL37 7.504411379496257 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9095 52.83 369.0 109780.0 25 0 11735.0 + 40645 VLDPYLLKY 9 74 562.3235360927615 1122.632519252323 2 562.3237792849541 MULTI CID FTMS 0 0 0 9093 89549.0 0.0834927296180596 29 -0.3349685668945312 2 Unmodified _VLDPYLLKY_ ENSG00000239789|ENST00000285298|MRPS17 30.63653989081413 0.1413794767160703 2 [{I|L}V]D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}KY 9 0 + 46.282 0.0 0.0 4.1226 4.1226 85.294 0.0 0.0 0.0 9.30577499866147 7.597587459137721 7.597587459137721 46.28198746230489 0 0.7742275032520141 2.0 0.0 0.0 + + [{I|L}V]D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}KY 4.1226 + + 106 + 1 1.995 39675.2 1.0 5315 3778 9093 DOHH2_400M_050219_2,9095 DOHH2_400M_050219_2,9095,VLDPYLLKY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9098 52.851 800.0 133740.0 25 0 7452.8 -1 0 104 902.910550672803 1803.8065484124056 2 903.4115478396416 MULTI CID FTMS 0 0 0 9097 141247.203125 0.6684802510459261 -8 0.0967521667480468 1 2 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}YE 13 -1 91.293 0.0 0.0 5.0612 0.0 0.0 0.0 226.13464834820584 226.13464834820584 69.8668106586153 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.3807196863200844 1.079689690656103 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}YE 5.0612 - 3134 1 1.995 77162.4 0.7799999713897705 5316 3780 9097 DOHH2_400M_050219_2,9098 DOHH2_400M_050219_2,9098, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9099 52.864 800.0 205750.0 25 0 12125.0 + -1 TAEVLFDMW 9 129 564.2587408102405 1126.502928687281 2 564.2589599490166 MULTI CID FTMS 0 0 0 9097 119086.9140625 0.0371916570235425 -24 0.305450439453125 2 Oxidation (M) _TAEVLFDM(Oxidation (M))W_ REV__ENSG00000197442|ENST00000359015|MAP3K5 30.22481116460888 0.1466181017706357 2 [TA]D{I|L} 4 -1 39.539 0.0 0.0 3.5099 0.0 0.0 0.0 723.2840315527684 723.2840315527684 11.43044601909807 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 1.055462187404089 0.0 [TA]D{I|L} 3.5099 - 508 1 1.995 127337.9 0.4399999976158142 5317 3780 9097 DOHH2_400M_050219_2,9099 DOHH2_400M_050219_2,9099,TAEVLFDMW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9100 52.878 800.0 70896.0 25 0 3043.3 -1 0 85 1193.547907680448 3577.6218936415444 3 1193.880664050579 MULTI CID FTMS 0 0 0 9097 111355.296875 0.4897550042637802 -15 0.1429405212402343 3 2 {I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 15 -1 52.495 0.0 0.0 1.4673 0.0 0.0 1834.82716815502 0.0 1834.82716815502 0.0 23.90092514408777 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 {I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.4673 - 2740 + 1 1.995 41916.7 0.4099999964237213 5318 3780 9097 DOHH2_400M_050219_2,9100 DOHH2_400M_050219_2,9100, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9103 52.895 583.0 205200.0 25 0 22461.0 + 25299 NAFFGSVI 8 92 854.4411362724579 853.4338598058579 1 854.4407836794853 MULTI CID FTMS 0 0 0 9102 237951.421875 1.0 0 0.0 1 Unmodified _NAFFGSVI_ REV__ENSG00000101452|ENST00000252011|DHX35;REV__nc|ENSG00000101452|Q9H5Z1-2|DHX35 77.98433622928108 0.1005472218284828 2 {[QG]|[NA]}{M(Oxidation (M))|F}YQV{I|L} 7 -1 + 86.177 0.0 0.0 10.098 10.098 94.949 0.0 0.0 0.0 20.726825097560425 16.320232147054057 16.320232147054057 9.33053210369387 0 1.674742501084005 1.0969100130080565 0.0 1.372363747448347 {[QG]|[NA]}{M(Oxidation (M))|F}YQV{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}Y[AG]V{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}QYV{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}[SG]{M(Oxidation (M))|F}V{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}YVQ{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}Y{I|L}N{I|L};[YQ]{M(Oxidation (M))|F}GQV{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}[AG]YV{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}YV[AG]{I|L};[Y{M(Oxidation (M))|F}]QGQV{I|L} 10.098;9.0044;8.5964;8.2173;8.1607;8.1007;7.669;7.5031;7.0674;7.0099 -;-;-;-;-;-;-;-;-;- 1188 1 1.995 86088.7 1.0 5319 3782 9102 DOHH2_400M_050219_2,9103 DOHH2_400M_050219_2,9103,NAFFGSVI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9106 52.904 98.0 875560.0 25 0 42944.0 -1 0 83 966.9642085988252 1931.9138642644505 2 967.4665405154228 MULTI CID FTMS 0 0 0 9105 1084883.375 0.8971114454163737 4 -0.0310287475585937 1 2 [NP]{I|L}NAD[PG]RQWN{I|L}DP[EP] 17 -1 + 99.12 0.0 0.0 5.1307 5.1307 82.453 0.0 0.0 0.0 12.373243249168723 73.76796759865074 12.373243249168723 8.998848471167321 0 0.5 1.3010299956639813 1.0356668758921828 0.3494850021680094 [NP]{I|L}NAD[PG]RQWN{I|L}DP[EP];[NP]{I|L}GGAD[PG]RQWN{I|L}DP[EP];[NP]{I|L}NAD[PG]R[AG]WN{I|L}DP[EP];[NP]{I|L}NAD[PG]RQWGG{I|L}DP[EP];[NP]{I|L}NW[PG]RQDAN{I|L}DP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NADQR[PG]DYQ{[TV]|[{I|L}S]};[NP]{I|L}NAD[PG]RQDAN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NADQR[PG]DYK{[CP]|[EA]};[NP]{I|L}NW[PG]RQDAGG{I|L}DP[EP];[NP]{I|L}NW[PG]R[AG]DAN{I|L}DP[EP] 5.1307;4.6649;4.6649;4.6649;4.6358;4.2472;4.1958;4.1825;4.17;4.17 -;-;-;-;-;-;-;-;-;- 1890 1 1.995 62609.4 1.0 5320 3784 9105 DOHH2_400M_050219_2,9106 DOHH2_400M_050219_2,9106, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9107 52.918 800.0 185250.0 25 0 14684.0 + 45564 YVDPQFLTY 9 96 1145.5506283487823 1144.5433518821826 1 1145.550952136517 MULTI CID FTMS 0 0 0 9105 105503.234375 0.0241238446776141 42 -0.4711036682128906 2 Unmodified _YVDPQFLTY_ ENSG00000181191|ENST00000374571|PJA1;ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000181191|Q8NG27-2|PJA1;nc|ENSG00000181191|Q8NG27|PJA1;nc|ENSG00000198961|O43164-2|PJA2 57.24910588100465 0.0276051374632116 2 [QP]{M(Oxidation (M))|F}{I|L}DVYTY 9 6 + 80.429 0.0 0.0 7.0271 7.0271 62.613 0.0 0.0 0.0 21.77317490243957 16.478174818886373 16.478174818886373 0.0 0 0.4247425010840047 1.2218487496163564 0.4247425010840047 0.6861818737241735 [QP]{M(Oxidation (M))|F}{I|L}DVYTY;[QP]{M(Oxidation (M))|F}{I|L}DYVTY;[QP]{M(Oxidation (M))|F}{I|L}YDVTY;[QP]D{M(Oxidation (M))|F}{I|L}VYTY;[QP]D{M(Oxidation (M))|F}{I|L}YVTY;[QP]{M(Oxidation (M))|F}D{I|L}YVTY;[QP]{M(Oxidation (M))|F}D{I|L}VYTY;[QP]{M(Oxidation (M))|F}{I|L}DTYVY;[QP]DVY{M(Oxidation (M))|F}{I|L}TY;[QP]{M(Oxidation (M))|F}{I|L}TDYVY 7.0271;7.0271;6.6103;6.5396;6.5396;6.5357;6.5357;6.4753;6.4704;6.3638 -;-;-;-;-;-;-;-;-;- 5489 1 1.995 95627.1 0.4199999868869781 5321 3784 9105 DOHH2_400M_050219_2,9107 DOHH2_400M_050219_2,9107,YVDPQFLTY True True YVDPQFLTY 52.917891 1145.55095213652 30495286.0 9105.0 nc|ENSG00000181191|Q8NG27|PJA1;;ENSG00000181191|ENST00000374571|PJA1;;nc|ENSG00000181191|Q8NG27-2|PJA1;;nc|ENSG00000198961|O43164-2|PJA2;;ENSG00000198961|ENST00000361189|PJA2 6.962432702382405 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9112 52.937 236.0 190250.0 25 0 9156.5 -1 0 65 973.972445422161 1945.9303379111216 2 974.4740478396416 MULTI CID FTMS 0 0 0 9111 244328.359375 0.4659698134572978 10 -0.1027984619140625 1 2 [MN]{[MS]|[{M(Oxidation (M))|F}A]}[YG]EAQ 9 -1 42.482 0.0 0.0 2.1831 0.0 0.0 0.0 931.4633356540412 931.4633356540412 12.649087242336776 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.7614393726401688 [MN]{[MS]|[{M(Oxidation (M))|F}A]}[YG]EAQ 2.1831 - 177 + 1 1.995 40498.1 1.0 5322 3788 9111 DOHH2_400M_050219_2,9112 DOHH2_400M_050219_2,9112, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9113 52.951 800.0 87078.0 25 0 8074.7 + -1 YWCQYFVYFWL 11 88 837.8737262049101 1673.73289947662 2 837.8729736208916 MULTI CID FTMS 0 0 0 9111 65294.01953125 0.7050158019694572 1 -0.0208511352539062 2 Carbamidomethyl (C) _YWC(Carbamidomethyl (C))QYFVYFWL_ REV__L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|122|1|anti-sense 0.3506318815782774 0.8734936314171269 2 DEAQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 12 -1 80.685 0.0 0.0 4.8207 0.0 0.0 248.09126479316564 0.0 248.09126479316564 0.0 56.873212897245295 0.0 0.0 0 0.8252574989159953 0.0 0.3807196863200844 0.7302046884880937 DEAQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 4.8207 - 759 1 1.995 52665.5 0.3799999952316284 5323 3788 9111 DOHH2_400M_050219_2,9113 DOHH2_400M_050219_2,9113,YWCQYFVYFWL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9116 52.971 800.0 101870.0 25 0 5071.0 -1 0 131 888.9137420561227 1775.812931179045 2 889.4171630740166 MULTI CID FTMS 0 0 0 9115 55687.07421875 0.437594001625765 -14 0.1769599914550781 1 2 [PG]ASWMQ{I|L} 8 -1 47.195 0.0 0.0 2.6577 0.0 0.0 0.0 902.3837679312516 902.3837679312516 25.21341055259517 0.0 0.0 0.0 0 0.0 0.7958800173440752 1.3882104921644451 0.0 [PG]ASWMQ{I|L} 2.6577 - 5852 1 1.995 55052.2 0.3799999952316284 5324 3790 9115 DOHH2_400M_050219_2,9116 DOHH2_400M_050219_2,9116, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9117 52.98 485.0 622790.0 25 0 97695.0 + 24331 MEGWTDLLY 9 116 1127.509486494044 1126.502210027444 1 1127.507739245892 MULTI CID FTMS 0 0 0 9115 267166.15625 0.3607130503918838 -11 0.1246223449707031 2 Unmodified _MEGWTDLLY_ ENSG00000141837|ENST00000360228|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A 42.09456458481378 0.0639583784996157 2 {I|L}{I|L}ATD{I|L}Y 7 5 56.943 0.0 0.0 5.0548 0.0 0.0 319.0661474150256 0.0 319.0661474150256 0.0 26.41895667918575 0.0 0.0 0 0.0 0.0 1.1237125054200234 0.0 {I|L}{I|L}ATD{I|L}Y 5.0548 - 2499 1 1.995 179789.4 1.0 5325 3790 9115 DOHH2_400M_050219_2,9117 DOHH2_400M_050219_2,9117,MEGWTDLLY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9121 53.004 800.0 49929.0 25 0 948.81 -1 0 78 1118.579243942146 0 1118.110522449017 PEAK CID FTMS 0 0 0 9120 52627.83203125 1.0 0 0.0 1 2 V 1 -1 6.9897 0.0 0.0 0.31272 0.0 0.0 1844.9542509684736 288.0993746393188 2133.0536256077926 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.31272 - 5 + 1 1.995 32185.6 0.9300000071525574 5326 3793 9120 DOHH2_400M_050219_2,9121 DOHH2_400M_050219_2,9121, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9125 53.029 800.0 104740.0 25 0 9635.5 + 7908 ELQEKFLSL 9 108 553.8084596360646 1105.6023663389292 2 553.8083984255791 MULTI CID FTMS 0 0 0 9124 94970.7421875 0.6995045797714838 -12 0.1133995056152343 1 Unmodified _ELQEKFLSL_ ENSG00000117724|ENST00000366955|CENPF 106.94017166704064 0.0073169432358171 2 {[TV]|[{I|L}S]}GQ{M(Oxidation (M))|F}{I|L}E{I|L}S{I|L} 10 5 + 45.754 0.0 0.0 4.1383 4.1383 69.871 0.0 0.0 0.0 0.8397719886150838 1.3510931138671225 0.8397719886150838 0.9421249706470292 0 0.8182503180159344 1.3010299956639813 2.091129063296272 0.7742275032520141 {[TV]|[{I|L}S]}GQ{M(Oxidation (M))|F}{I|L}E{I|L}S{I|L};{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}Q{I|L}E{I|L}S{I|L};[AG]EK{M(Oxidation (M))|F}{I|L}E{I|L}S{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}GQE{I|L}S{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}GQ{I|L}E{I|L}S{I|L};[{I|L}T][NG]{M(Oxidation (M))|F}{I|L}E{I|L}S{I|L};{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{I|L}QE{I|L}S{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G{I|L}QE{I|L}S{I|L};{[TV]|[{I|L}S]}GQ{M(Oxidation (M))|F}{I|L}S{I|L}E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{M(Oxidation (M))|F}{I|L}E{I|L}S{I|L} 4.1383;4.0531;3.9999;3.9601;3.9521;3.7257;3.7012;3.6002;3.4795;3.4321 -;-;-;-;-;-;-;-;-;- 1716 1 1.995 68116.6 0.3600000143051147 5327 3796 9124 DOHH2_400M_050219_2,9125 DOHH2_400M_050219_2,9125,ELQEKFLSL True True ELQEKFLSL 53.028664 553.808398425579 849541.5625 9124.0 ENSG00000117724|ENST00000366955|CENPF 6.050327777862549 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9128 53.049 800.0 115500.0 25 0 12116.0 + 853 AETPDIKLF 9 111 517.2816068735767 1032.5486608139531 2 517.2819702029228 MULTI CID FTMS 0 0 0 9127 88106.1015625 0.0028494979850011 78 -1.2630157470703125 1 Unmodified _AETPDIKLF_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF;ENST00000599909.1_1_19:58899504-58899627:+|nuORF 37.07464296494664 0.0915153923251136 2 [DP]{I|L}K{I|L}T{M(Oxidation (M))|F}{[CP]|[EA]} 9 6 + 50.613 0.0 0.0 4.9018 4.9018 71.803 0.0 0.0 0.0 0.2853716820872165 5.642492736872597 0.2853716820872165 0.2853716820872165 0 0.0 1.2218487496163564 0.7302046884880937 0.0 [DP]{I|L}K{I|L}T{M(Oxidation (M))|F}{[CP]|[EA]};{[CP]|[EA]}TPD{I|L}K{I|L}{M(Oxidation (M))|F};{[CP]|[EA]}TPD{I|L}K{M(Oxidation (M))|F}{I|L};[DP]{I|L}KT{I|L}{M(Oxidation (M))|F}{[CP]|[EA]};[DP]{I|L}TK{I|L}{M(Oxidation (M))|F}{[CP]|[EA]};[TP]GVV{I|L}T{M(Oxidation (M))|F}{[CP]|[EA]};[DP]T{I|L}K{I|L}{M(Oxidation (M))|F}{[CP]|[EA]};[K{I|L}][DP]{I|L}T{M(Oxidation (M))|F}{[CP]|[EA]};[TP]D{I|L}K{I|L}{M(Oxidation (M))|F}{[CP]|[EA]};[K{I|L}]{NN|[MP]|[D{I|L}]|[EV]}PT{M(Oxidation (M))|F}{[CP]|[EA]} 4.9018;4.8741;4.0804;3.5948;3.1327;2.6723;2.5496;2.194;2.0304;1.72 -;+;-;-;-;-;-;-;-;- + 323 1 1.995 74232.5 0.3899999856948852 5328 3798 9127 DOHH2_400M_050219_2,9128 DOHH2_400M_050219_2,9128,AETPDIKLF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9135 53.08 469.0 154920.0 25 0 13311.0 + 2650 ATDFDVLSY 9 87 1030.4715818934242 1029.4643054268242 1 1030.472705066204 MULTI CID FTMS 0 0 0 9134 128713.9375 0.8429927217269901 1 -0.0247650146484375 1 Unmodified _ATDFDVLSY_ ENSG00000211456|ENST00000389061|SACM1L;ENST00000445499.2_1_3:45730957-45754662:+|nuORF;ENST00000463237.5_1_3:45730948-45754703:+|nuORF;ENST00000463347.5_1_3:45730948-45748420:+|nuORF 46.020951573049366 0.0490941689151868 2 {[{M(Oxidation (M))|F}D]|MM}DTAV{I|L}SY 9 4 + 75.238 0.0 0.0 7.3084 7.3084 88.421 0.0 0.0 0.0 4.137342758552677 45.5854562117252 4.137342758552677 7.213403050078767 0 0.4247425010840047 0.0 1.9386218330464624 0.0 {[{M(Oxidation (M))|F}D]|MM}DTAV{I|L}SY;{[{M(Oxidation (M))|F}D]|MM}DTVA{I|L}SY;MH{I|L}VATD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[{M(Oxidation (M))|F}D]|MM}DTA{I|L}VSY;[DV]{M(Oxidation (M))|F}DTA{I|L}SY;{[ES]|[DT]|[{I|L}C]}A{M(Oxidation (M))|F}DV{I|L}SY;{[{M(Oxidation (M))|F}D]|MM}DVTA{I|L}SY;{[{M(Oxidation (M))|F}D]|MM}DTAVS{I|L}Y;MH{I|L}AVTD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};MHV{I|L}ATD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 7.3084;6.6077;6.6034;6.5774;6.3749;6.0837;6.0825;5.922;5.9027;5.8724 -;-;-;-;-;-;-;-;-;- 3378 1 1.995 55064.5 1.0 5329 3804 9134 DOHH2_400M_050219_2,9135 DOHH2_400M_050219_2,9135,ATDFDVLSY True False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9136 53.094 800.0 125810.0 25 0 8107.9 + 38480 TSDQATLLLY 10 99 1124.5830504115836 1123.5757739449837 1 1124.576831042767 MULTI CID FTMS 0 0 0 9134 101471.1875 0.987668057515454 -2 0.0079307556152343 2 Unmodified _TSDQATLLLY_ ENSG00000141627|ENST00000675505|DYM;nc|ENSG00000141627|Q7RTS9-2|DYM;nc|ENSG00000141627|Q7RTS9|DYM 45.739877483867886 0.1051543674217965 2 TT{I|L}{I|L}{I|L}Y 6 4 58.236 0.0 0.0 5.1831 0.0 0.0 401.15367324043126 0.0 401.15367324043126 0.0 11.019249614902982 0.0 0.0 0 0.6643943297944485 0.0 2.4247425010840047 0.0 TT{I|L}{I|L}{I|L}Y 5.1831 - 976 1 1.995 68277.4 0.449999988079071 5330 3804 9134 DOHH2_400M_050219_2,9136 DOHH2_400M_050219_2,9136,TSDQATLLLY True True TSDQATLLLY 53.093794 1124.57683104277 612270.625 9134.0 nc|ENSG00000141627|Q7RTS9-2|DYM;;nc|ENSG00000141627|Q7RTS9|DYM;;ENSG00000141627|ENST00000675505|DYM 5.6223829587300616 1.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9138 53.112 800.0 105840.0 25 0 5715.4 -1 0 95 902.910550672803 1803.8065484124056 2 903.4136840701104 MULTI CID FTMS 0 0 0 9137 90566.0390625 0.428621644813437 17 -0.2348594665527343 1 2 Y{M(Oxidation (M))|F}ADQQAECC(Carbamidomethyl (C))V{I|L} 12 -1 80.576 0.0 0.0 4.467 0.0 0.0 358.24082683213084 0.0 358.24082683213084 0.0 63.87664871696403 0.0 0.0 0 0.0 0.0 0.0 1.1549471895720984 Y{M(Oxidation (M))|F}ADQQAECC(Carbamidomethyl (C))V{I|L} 4.467 - 2615 + 1 1.995 62329.5 0.9900000095367432 5331 3805 9137 DOHH2_400M_050219_2,9138 DOHH2_400M_050219_2,9138, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9139 53.125 800.0 55970.0 25 0 5430.4 -1 0 62 1159.2853364975786 4633.1122401239145 4 1160.037158191204 MULTI CID FTMS 0 0 0 9137 71007.7421875 0.4330706699227286 -8 0.0651130676269531 2 2 NV 2 -1 10.969 0.0 0.0 0.23675 0.0 0.0 3996.853621057344 420.1238497369751 4416.97747079432 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NV 0.23675 - 39 + 1 1.995 34128.2 0.3799999952316284 5332 3805 9137 DOHH2_400M_050219_2,9139 DOHH2_400M_050219_2,9139, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9141 53.13 19.0 3388900.0 25 0 227480.0 12362 GTEIVTESEY 10 72 564.2587408102405 1126.502928687281 2 564.2593871951103 MULTI CID FTMS 0 0 0 9140 2705795.25 0.8450383462041485 2 -0.0302047729492187 1 Unmodified _GTEIVTESEY_ ENSG00000147180|ENST00000674551|ZNF711;nc|ENSG00000147180|Q9Y462-2|ZNF711;nc|ENSG00000147180|Q9Y462|ZNF711 19.256988751693697 0.5244284437930726 2 [TA]D{I|L} 4 8 42.396 0.0 0.0 3.7635 0.0 0.0 0.0 723.282719296909 723.282719296909 24.436974992327123 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.6989700043360187 0.0 [TA]D{I|L} 3.7635 - 122 1 1.995 55645.2 1.0 5333 3806 9140 DOHH2_400M_050219_2,9141 DOHH2_400M_050219_2,9141,GTEIVTESEY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9142 53.144 800.0 69409.0 25 0 3809.5 -1 0 90 1193.547907680448 3577.6218936415444 3 1194.554492175579 MULTI CID FTMS 0 0 0 9140 137117.90625 0.5839565475522663 5 -0.059478759765625 2 2 PPPP 4 -1 18.928 0.0 0.0 0.52906 0.0 0.0 2735.1920564216475 451.19394861392817 3186.386005035576 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPP 0.52906 - 454 + 1 1.995 39978.4 0.5799999833106995 5334 3806 9140 DOHH2_400M_050219_2,9142 DOHH2_400M_050219_2,9142, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9143 53.152 419.0 197580.0 25 0 21648.0 + 32949 SELLSDVRF 9 80 533.2827622927127 1064.5509716522254 2 533.2824584841728 MULTI CID FTMS 0 0 0 9140 125071.5703125 0.8910268283815768 -10 0.1130828857421875 3 Unmodified _SELLSDVRF_ ENSG00000064726|ENST00000261721|BTBD1;nc|ENSG00000064726|Q9H0C5-2|BTBD1 36.506200033944 0.094635877243972 2 {[ES]|[DT]|[{I|L}C]}{I|L}{I|L}SD{M(Oxidation (M))|F}[RV] 9 2 + 50.111 0.0 0.0 4.7072 4.7072 76.021 0.0 0.0 0.0 7.147642715192504 3.979400086720375 3.979400086720375 3.979400086720375 0 1.0 0.0 0.4247425010840047 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}{I|L}SD{M(Oxidation (M))|F}[RV];{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}SDV[R{M(Oxidation (M))|F}];{[ES]|[DT]|[{I|L}C]}{I|L}{[DS]|[MA]|[CV]|TT}{I|L}{M(Oxidation (M))|F}[RV];{[ES]|[DT]|[{I|L}C]}{I|L}{[DS]|[MA]|[CV]|TT}{I|L}V[R{M(Oxidation (M))|F}];{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}][PG];{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}[PA]{M(Oxidation (M))|F}[RV];{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}{I|L}[R{M(Oxidation (M))|F}][PG];{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}[PA]V[R{M(Oxidation (M))|F}] 4.7072;4.3334;3.5114;3.1376;2.8297;2.6643;2.3815;2.2905 -;+;-;-;-;-;-;- + 226 + 1 1.995 68314.6 1.0 5335 3806 9140 DOHH2_400M_050219_2,9143 DOHH2_400M_050219_2,9143,SELLSDVRF True True SELLSDVRF 53.151503 533.282458484173 705879.8125 9140.0 nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1 4.9803816477457685 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9146 53.163 254.0 221610.0 25 0 12650.0 -1 0 65 966.9642085988252 1931.9138642644505 2 967.4625732302666 MULTI CID FTMS 0 0 0 9145 266183.78125 0.2201126150943029 28 -0.3594245910644531 1 2 [NP]{I|L}NAD{[RE]|[WV]}N[PG]AN 13 -1 48.18 0.0 0.0 2.4939 0.0 0.0 0.0 566.2445084239638 566.2445084239638 19.22231968193824 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.0 0.0 [NP]{I|L}NAD{[RE]|[WV]}N[PG]AN 2.4939 - 459 1 1.995 45836.5 1.0 5336 3808 9145 DOHH2_400M_050219_2,9146 DOHH2_400M_050219_2,9146, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9147 53.177 800.0 110980.0 25 0 7509.0 + 36689 TDALNFIMEEM 11 100 657.2913286706529 1312.5681044081057 2 657.2911865115166 MULTI CID FTMS 0 0 0 9145 85161.9375 0.7539009694795623 -5 0.0904350280761718 2 Unmodified _TDALNFIMEEM_ REV__ENSG00000064655|ENST00000327619|EYA2;REV__ENSG00000104313|ENST00000340726|EYA1;REV__ENSG00000112319|ENST00000355286|EYA4;REV__ENST00000496494.5_1_8:72111577-72234167:-|nuORF;REV__ENST00000532518.1_1_6:133783895-133834099:+|nuORF;REV__nc|ENSG00000064655|O00167-2|EYA2;REV__nc|ENSG00000064655|O00167-3|EYA2;REV__nc|ENSG00000104313|Q99502-2|EYA1;REV__nc|ENSG00000112319|O95677-2|EYA4;REV__nc|ENSG00000112319|O95677-3|EYA4;REV__nc|ENSG00000112319|O95677-4|EYA4;REV__nc|ENSG00000112319|O95677-5|EYA4 16.149105407346934 0.6992268271266642 2 [TA]D{I|L} 4 -1 30.054 0.0 0.0 2.2897 0.0 0.0 0.0 909.34942089664 909.34942089664 11.126590506049324 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.805462187404089 0.0 [TA]D{I|L} 2.2897 - 355 1 1.995 76815.7 0.3499999940395355 5337 3808 9145 DOHH2_400M_050219_2,9147 DOHH2_400M_050219_2,9147,TDALNFIMEEM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9157 53.225 800.0 63328.0 25 0 10774.0 -1 0 80 888.9137420561227 1775.812931179045 2 889.4171020388603 MULTI CID FTMS 0 0 0 9156 81952.9609375 0.6439936847974274 13 -0.206085205078125 1 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQE[QA]{M(Oxidation (M))|F} 11 -1 31.916 0.0 0.0 1.7972 0.0 0.0 0.0 518.2683168622776 518.2683168622776 13.49926060438829 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQE[QA]{M(Oxidation (M))|F} 1.7972 - 722 1 1.995 40832.9 0.949999988079071 5338 3817 9156 DOHH2_400M_050219_2,9157 DOHH2_400M_050219_2,9157, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9158 53.239 800.0 11135.0 25 0 982.14 -1 0 28 976.1339974482 0 976.459033191204 PEAK CID FTMS 0 0 0 -1 0 2 2 A{I|L} 2 -1 10.969 0.0 0.0 0.56244 0.0 0.0 1351.9547491915184 411.15281091861567 1763.107560110134 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L} 0.56244 - 9 + 1 1.995 16419.4 0.3899999856948852 5339 3817 9156 DOHH2_400M_050219_2,9158 DOHH2_400M_050219_2,9158, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9159 53.247 450.0 52785.0 25 0 3042.9 + + 19137 WENSFVSVY 9 51 1127.509486494044 1126.502210027444 1 1130.512377917767 MULTI CID FTMS 0 0 0 9156 84975.796875 0.7512792307030288 13 -0.206085205078125 3 Unmodified _LEAEESSYVT_ ENSG00000174231|ENST00000304992|PRPF8 14.838274106304384 0.5985701837916485 2 [WE]NS{M(Oxidation (M))|F}VW 7 -1 32.911 0.0 0.0 2.9215 0.0 0.0 0.0 175.0442992210566 175.0442992210566 24.221222823376955 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.6989700043360187 [WE]NS{M(Oxidation (M))|F}VW 2.9215 - 200 1 1.995 24099.6 1.0 5340 3817 9156 DOHH2_400M_050219_2,9159 DOHH2_400M_050219_2,9159,LEAEESSYVT False False WENSFVSVY 53.247352 1130.51237791777 2221216.5 9156.0 ENSG00000174231|ENST00000304992|PRPF8 6.075252056121826 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9162 53.268 800.0 49350.0 25 0 3412.4 -1 0 59 1164.8664912213712 3491.5776442643137 3 1165.202075183392 MULTI CID FTMS 0 0 0 9161 44313.3046875 0.3030592182560583 -9 0.0706253051757812 1 2 Y{[MS]|[{M(Oxidation (M))|F}A]}DQQA 7 -1 13.275 0.0 0.0 0.38021 0.0 0.0 2088.007451069336 577.2014864557249 2665.2089375250607 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{[MS]|[{M(Oxidation (M))|F}A]}DQQA 0.38021 - 115 + 1 1.995 36865.4 0.4099999964237213 5341 3819 9161 DOHH2_400M_050219_2,9162 DOHH2_400M_050219_2,9162, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9163 53.282 800.0 109720.0 25 0 14932.0 + 28769 PYACTDLAVY 10 104 558.2591133715835 1114.5036738099668 2 558.2583495974541 MULTI CID FTMS 0 0 0 9161 84634.21875 0.1714548729029769 -13 0.12603759765625 2 Unmodified _PYACTDLAVY_ ENSG00000181240|ENST00000321510|SLC25A41 20.453626601364224 0.5043500229302764 2 {I|L}VEA{I|L}VY 7 7 34.883 0.0 0.0 3.1299 0.0 0.0 309.0450916974625 0.0 309.0450916974625 0.0 2.932597985977665 0.0 0.0 0 0.718765315847925 0.0 0.3494850021680094 0.0 {I|L}VEA{I|L}VY 3.1299 - 463 1 1.995 71353.0 0.3499999940395355 5342 3819 9161 DOHH2_400M_050219_2,9163 DOHH2_400M_050219_2,9163,PYACTDLAVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9164 53.296 800.0 49600.0 25 0 3618.9 -1 0 64 1067.1926659131489 3198.556168339647 3 1067.523852527142 MULTI CID FTMS 0 0 0 9161 81435.4609375 1.0 0 0.0 3 2 M{[QV]|[N{I|L}]|[RA]|[KV]} 3 -1 10.458 0.0 0.0 0.32695 0.0 0.0 2822.373049577045 0.0 2822.373049577045 0.0 3.4678748622465623 0.0 0.0 0 0.0 0.0 0.0 0.0 M{[QV]|[N{I|L}]|[RA]|[KV]} 0.32695 - 12 1 1.995 33420.7 0.9399999976158142 5343 3819 9161 DOHH2_400M_050219_2,9164 DOHH2_400M_050219_2,9164, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9167 53.316 800.0 127630.0 25 0 16202.0 + 9179 FGGVLILIHR 10 100 375.5694040548875 0 375.5694763064384 PEAK CID FTMS 0 0 0 9166 72270.5 0.6358370425907849 1 -0.0290794372558593 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 18.1463463914782 0.3130158145628772 2 {I|L}{I|L}{I|L} 3 7 11.972 0.0 0.0 1.5982 0.0 0.0 98.69986780615348 308.1471346490844 406.8470024552379 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}{I|L}{I|L} 1.5982 + + 19 + 1 1.995 86050.1 0.7200000286102295 5344 3821 9166 DOHH2_400M_050219_2,9167 DOHH2_400M_050219_2,9167,FGGVLILIHR False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9168 53.329 731.0 75920.0 25 0 6775.7 -1 0 80 914.9320529907372 0 914.9344360232352 PEAK CID FTMS 0 0 0 9166 95609.890625 1.0 0 0.0 2 2 Y{M(Oxidation (M))|F}ADQQAE 8 -1 39.651 0.0 0.0 2.1693 0.0 0.0 358.23243986643666 514.2067354791624 872.4391753455991 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F}ADQQAE 2.1693 - 309 + 1 1.995 42499.3 1.0 5345 3821 9166 DOHH2_400M_050219_2,9168 DOHH2_400M_050219_2,9168, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9171 53.347 663.0 172780.0 25 0 12860.0 + -1 MNWRYCRLWCL 11 113 837.3813485802551 1672.74814422731 2 837.3821899294853 MULTI CID FTMS 0 0 0 9170 124340.7734375 0.4114453784136875 -9 0.1358413696289062 1 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))NWRYC(Carbamidomethyl (C))RLWC(Carbamidomethyl (C))L_ REV__ENST00000584052.5_1_18:21043977-21044085:+|nuORF 1.4819007175156935 0.86815623132643 2 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 12 -1 90.501 0.0 0.0 5.4103 0.0 0.0 248.09124953437657 0.0 248.09124953437657 0.0 69.2862466261407 0.0 0.0 0 1.0682503180159344 0.0 0.6989700043360187 1.1989700043360187 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 5.4103 - 1080 1 1.995 83009.2 1.0 5346 3823 9170 DOHH2_400M_050219_2,9171 DOHH2_400M_050219_2,9171,MNWRYCRLWCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9172 53.359 676.0 97648.0 25 0 7965.5 + 19135 ELDPLTGEWHY 11 86 680.3178545659104 1358.6211561986206 2 680.3154174685478 MULTI CID FTMS 0 0 0 9170 96670.9921875 0.9488194129580594 -2 0.0331459045410156 2 Unmodified _LEACLWEFVSY_ ENSG00000091039|ENST00000261183|OSBPL8;nc|ENSG00000091039|Q9BZF1-2|OSBPL8;nc|ENSG00000091039|Q9BZF1-3|OSBPL8 13.042465956692816 0.7638483625850725 2 {[QN]|[E{I|L}]|[KN]}DP{I|L}TWWHY 10 7 + 75.126 0.0 0.0 5.5296 5.5296 84.785 0.0 0.0 0.0 45.9176003468815 16.53212513775344 16.53212513775344 9.164539485499262 0 0.0 1.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}DP{I|L}TWWHY;{[QN]|[E{I|L}]|[KN]}DP{I|L}T{[DA]|[EG]}WHY;{[QN]|[E{I|L}]|[KN]}DP{I|L}TPA{[CT]|[{M(Oxidation (M))|F}G]}HY;{[QN]|[E{I|L}]|[KN]}DP{I|L}[EC]YKSY;{[QN]|[E{I|L}]|[KN]}DP{I|L}TP{I|L}DD[MT];{[QN]|[E{I|L}]|[KN]}DP{I|L}[EC][Q{I|L}]HY;{[QN]|[E{I|L}]|[KN]}DP{I|L}TP{[YD]|[{M(Oxidation (M))|F}M]}EAP;{[QN]|[E{I|L}]|[KN]}DP{I|L}[EC]{[YC]|[HE]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.5296;4.855;4.677;4.2081;3.9311;3.2533;3.223;1.6943 -;-;-;-;-;-;-;- 716 + 1 1.995 54882.6 1.0 5347 3823 9170 DOHH2_400M_050219_2,9172 DOHH2_400M_050219_2,9172,LEACLWEFVSY False True ELDPLTGEWHY 53.358595 680.315417468548 812457.125 9170.0 ENSG00000091039|ENST00000261183|OSBPL8;;nc|ENSG00000091039|Q9BZF1-2|OSBPL8;;nc|ENSG00000091039|Q9BZF1-3|OSBPL8 8.75236463546753 2.0 False 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9174 53.366 257.0 410800.0 25 0 35941.0 -1 0 91 902.4178235328366 1802.821094132473 2 902.9182617068292 MULTI CID FTMS 0 0 0 9173 307290.9375 0.2185273821089385 -9 0.1576576232910156 1 2 [KT]KY{M(Oxidation (M))|F}ADQQAECC(Carbamidomethyl (C))V{I|L} 15 -1 + 92.394 0.0 0.0 5.125 5.125 56.098 0.0 0.0 0.0 70.33140101381974 11.540424199391268 11.540424199391268 0.0 0 0.0 0.0 1.1861818737241734 0.0 [KT]KY{M(Oxidation (M))|F}ADQQAECC(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ADQQAECVC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}AD[AG]QAECVC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQ[AG]AECC(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ADQQAECV[CG]{I|L};[KT]KY{M(Oxidation (M))|F}ADQ[AG]AECVC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}AD[AG]QAECC(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ADQQAEC[CG]V{I|L};[KT]KY{M(Oxidation (M))|F}WQQAECC(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}WQQAECC(Carbamidomethyl (C))V{I|L} 5.125;5.125;4.624;4.624;4.624;4.624;4.624;4.624;4.5427;4.5427 -;-;-;-;-;-;-;-;-;- 2860 + 1 1.995 75628.7 1.0 5348 3824 9173 DOHH2_400M_050219_2,9174 DOHH2_400M_050219_2,9174, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9179 53.383 145.0 407420.0 25 0 26736.0 + -1 TAEVLFDMW 9 78 564.2587408102405 1126.502928687281 2 564.2592040896416 MULTI CID FTMS 0 0 0 9178 330486.3125 0.1032131337203387 24 -0.5432777404785156 1 Oxidation (M) _TAEVLFDM(Oxidation (M))W_ REV__ENSG00000197442|ENST00000359015|MAP3K5 11.640296217721598 0.521594087909532 2 [TA]D{I|L} 4 -1 35.138 0.0 0.0 3.1192 0.0 0.0 0.0 723.2843977637059 723.2843977637059 17.179250024847263 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.7742275032520141 0.0 [TA]D{I|L} 3.1192 - 99 1 1.995 52318.1 1.0 5349 3828 9178 DOHH2_400M_050219_2,9179 DOHH2_400M_050219_2,9179,TAEVLFDMW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9180 53.397 800.0 35446.0 25 0 7469.6 -1 0 52 1148.940234363079 0 1148.940234363079 PEAK CID FTMS 0 0 0 -1 0 2 2 Q 1 -1 5.4846 0.0 0.0 0.23889 0.0 0.0 1773.6998524158082 391.0864351861938 2164.786287602002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.23889 - 10 + 1 1.995 27767.5 0.3899999856948852 5350 3828 9178 DOHH2_400M_050219_2,9180 DOHH2_400M_050219_2,9180, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9181 53.411 800.0 56239.0 25 0 3283.1 + 223 AATGVVLDL 9 84 858.4929408786362 857.4856644120362 1 858.1708251833916 MULTI CID FTMS 0 0 0 9178 20857.009765625 0.1268538562433619 17 -0.3461761474609375 3 Unmodified _AATGVVLDL_ ENSG00000165733|ENST00000374518|BMS1;ENST00000443754.1_1_9:67328347-67334199:-|nuORF;ENST00000554269.1_1_15:20362738-20365460:+|nuORF 46.020951573049366 0.0490941689151868 2 VV{I|L}D{I|L} 5 4 45.701 0.0 0.0 5.3297 0.0 0.0 300.1430836408219 0.0 300.1430836408219 0.0 35.52378753635658 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + VV{I|L}D{I|L} 5.3297 + + 87 1 1.995 39777.5 0.4000000059604645 5351 3828 9178 DOHH2_400M_050219_2,9181 DOHH2_400M_050219_2,9181,AATGVVLDL True True AATGVVLDL 53.411117 858.170825183392 760249.0 9178.0 ENSG00000165733|ENST00000374518|BMS1;;chr2:94197758-94198881|46|12.24|0.0|20.22|-|0|BMS1P23,BMS1P23|1;;ENST00000443754.1_1_9:67328347-67334199:-|nuORF;;ENST00000554269.1_1_15:20362738-20365460:+|nuORF 6.62653128306071 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9184 53.426 473.0 303240.0 25 0 21782.0 601 AEIVSIDTF 9 99 994.5115129044516 993.5042364378515 1 994.514697253704 MULTI CID FTMS 0 0 0 9183 194572.0625 0.555860225075724 8 -0.1832733154296875 1 Unmodified _AEIVSIDTF_ ENSG00000118162|ENST00000338134|KPTN;ENST00000595484.5_1_19:47984015-47987327:-|nuORF 65.23502041540118 0.0231836506122253 2 {[CP]|[EA]}{I|L}VS{I|L}DT{M(Oxidation (M))|F} 9 0 + 57.537 0.0 0.0 5.7914 5.7914 81.306 0.0 0.0 0.0 7.147642715192504 21.118391471639114 7.147642715192504 4.827796776480469 0 1.3001648626366045 0.0 0.8494850021680094 0.0 + + {[CP]|[EA]}{I|L}VS{I|L}DT{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}SV{I|L}DT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}EAV{I|L}DT{M(Oxidation (M))|F};{[CP]|[EA]}V{I|L}S{I|L}DT{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AVS{I|L}DT{M(Oxidation (M))|F};[{I|L}P]DR{I|L}YA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}D[{I|L}A]{I|L}DT{M(Oxidation (M))|F};{[CP]|[EA]}VTV{I|L}DT{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}ASV{I|L}DT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}V{[CP]|[EA]}{I|L}DT{M(Oxidation (M))|F} 5.7914;5.3054;4.8598;4.7432;4.6701;4.5058;4.3847;4.2572;4.1842;4.033 +;-;-;-;-;-;-;-;-;- + 2862 1 1.995 95536.0 1.0 5352 3830 9183 DOHH2_400M_050219_2,9184 DOHH2_400M_050219_2,9184,AEIVSIDTF True True ADEDPIMGF 53.426099 994.514697253704 810220.1875 9183.0 ENSG00000102898|ENST00000219169|NUTF2 1.0122165381908417 1.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9185 53.44 800.0 154640.0 25 0 5802.2 -1 0 156 967.822115598766 0 967.9619018435478 PEAK CID FTMS 0 0 0 9183 11222.1162109375 0.4824288295071902 -1 0.0040359497070312 2 2 WD{I|L}G 4 -1 13.672 0.0 0.0 0.70707 0.0 0.0 1308.352897113744 151.05169092349846 1459.4045880372423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WD{I|L}G 0.70707 - 287 + 1 1.995 82847.7 1.0 5353 3830 9183 DOHH2_400M_050219_2,9185 DOHH2_400M_050219_2,9185, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9186 53.454 800.0 137600.0 25 0 1824.7 -1 0 94 1157.057543933392 0 1157.057543933392 PEAK CID FTMS 0 0 0 -1 0 3 2 V 1 -1 1.2591 0.0 0.0 0.054455 0.0 0.0 1051.8028797595591 1158.2011202447875 2210.004000004347 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.054455 - 6 + 1 1.995 65080.6 0.4199999868869781 5354 3830 9183 DOHH2_400M_050219_2,9186 DOHH2_400M_050219_2,9186, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9189 53.469 510.0 143750.0 25 0 20282.0 305 ADTTLDESIY 10 83 1127.5116694335013 1126.5043929669014 1 1127.496997058392 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _ADTTLDESIY_ ENSG00000183813|ENST00000330953|CCR4 24.020572477871973 0.4289996903560794 2 {I|L}{I|L}ATD{I|L}Y 7 6 55.521 0.0 0.0 4.9286 0.0 0.0 319.06651503730626 0.0 319.06651503730626 0.0 40.815016636499024 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {I|L}{I|L}ATD{I|L}Y 4.9286 - 56 1 1.995 51433.6 1.0 5355 3832 9188 DOHH2_400M_050219_2,9189 DOHH2_400M_050219_2,9189,ADTTLDESIY False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9190 53.47 78.0 152470.0 25 0 8285.0 -1 0 36 1093.471850574017 0 1093.471850574017 PEAK CID FTMS 0 0 0 -1 0 2 2 E 1 -1 6.9897 0.0 0.0 0.31991 0.0 0.0 1662.7306751697154 390.12497888736567 2052.855654057081 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.31991 - 2 + 1 1.995 18421.9 1.0 5356 3832 9188 DOHH2_400M_050219_2,9190 DOHH2_400M_050219_2,9190, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9192 53.475 119.0 63635.0 25 0 4334.5 -1 0 24 1034.9789572934146 0 1034.619433581829 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 16359.7 1.0 5357 3833 9191 DOHH2_400M_050219_2,9192 DOHH2_400M_050219_2,9192, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9193 53.477 101.0 161140.0 25 0 7143.3 -1 0 44 1097.597460925579 0 1097.597460925579 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 19955.2 1.0 5358 3833 9191 DOHH2_400M_050219_2,9193 DOHH2_400M_050219_2,9193, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9194 53.481 199.0 66115.0 25 0 4219.1 -1 0 24 1052.8517322359412 0 1052.861499011517 PEAK CID FTMS 0 0 0 -1 0 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 20198.4 1.0 5359 3833 9191 DOHH2_400M_050219_2,9194 DOHH2_400M_050219_2,9194, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9197 53.501 800.0 122110.0 25 0 14732.0 + 23633 ARNDYLLTL 9 91 539.798450608551 1077.582348283902 2 539.7980224490166 MULTI CID FTMS 0 0 0 9196 90364.2734375 0.7319946265925447 1 -0.0302352905273437 1 Unmodified _LTQHPQEII_ nc|ENSG00000137478|O94868-3|FCHSD2;nc|ENSG00000137478|O94868-2|FCHSD2;ENSG00000137478|ENST00000409418|FCHSD2 30.63653989081413 0.1413794767160703 2 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}T{I|L} 9 4 + 45.625 0.0 0.0 4.234 4.234 76.564 0.0 0.0 0.0 0.6767339569441333 16.43053421393809 0.6767339569441333 6.29370928348407 0 0.5 1.5228787452803376 0.805462187404089 0.5 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[DN]Y{I|L}{I|L}T{I|L};[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[DN]Y{I|L}T{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}P][HD]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}P][HD]E{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[DN]YT{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}R[W{M(Oxidation (M))|F}][KS]{I|L};[VP][KQ][HD]{I|L}E{I|L};[VP][KQ][HD]E{I|L}{I|L} 4.234;3.65;3.3273;2.7432;2.5853;2.4219;2.1845;1.9362;1.5145;1.3511 -;-;-;-;-;-;-;-;-;- 279 1 1.995 84561.1 0.959999978542328 5360 3835 9196 DOHH2_400M_050219_2,9197 DOHH2_400M_050219_2,9197,LTQHPQEII False False ARNDYLLTL 53.50114 539.798022449017 628091.0625 9196.0 nc|ENSG00000137478|O94868-3|FCHSD2;;nc|ENSG00000137478|O94868-2|FCHSD2;;ENSG00000137478|ENST00000409418|FCHSD2 4.563747723897298 2.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9198 53.515 800.0 23617.0 25 0 1619.1 -1 0 50 1151.990039050579 0 1151.990039050579 PEAK CID FTMS 0 0 0 -1 0 2 2 S 1 -1 4.6041 0.0 0.0 0.20001 0.0 0.0 1437.7878651111207 774.1158541315061 2211.9037192426267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.20001 - 2 + 1 1.995 22478.4 0.4699999988079071 5361 3835 9196 DOHH2_400M_050219_2,9198 DOHH2_400M_050219_2,9198, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9200 53.53 647.0 125460.0 25 0 22140.0 + 11144 GEIPWSQEL 9 87 1058.5140034772153 1057.5067270106154 1 1058.513232409954 MULTI CID FTMS 0 0 0 9199 96020.84375 0.4337002565079379 -3 0.0451850891113281 1 Unmodified _GEIPWSQEL_ ENSG00000140992|ENST00000342085|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;nc|ENSG00000140992|O15530-4|PDPK1 45.739877483867886 0.0497104363764649 2 [WP]SQE{I|L}GE{I|L} 9 6 + 64.315 0.0 0.0 6.0818 6.0818 83.191 0.0 0.0 0.0 21.12704280191289 30.61247546857875 21.12704280191289 5.967874862246568 0 0.0 1.3979400086720375 0.8274509799928715 0.0 [WP]SQE{I|L}GE{I|L};[WP]SQE{I|L}W{I|L};[WP]S[AG]E{I|L}GE{I|L};[WP][W{I|L}]SAGE{I|L};[WP]S[W{I|L}]AGE{I|L};[WP][W{I|L}]SQE{I|L};[WP]S[AG]E{I|L}W{I|L};[WP]S[W{I|L}]QE{I|L};[WP]SQ[W{I|L}]E{I|L};[WP]S[AG][W{I|L}]E{I|L} 6.0818;5.5175;5.2111;4.8443;4.7573;4.6829;4.6416;4.5959;4.432;3.5561 -;-;-;-;-;-;-;-;-;- 636 1 1.995 60656.9 1.0 5362 3836 9199 DOHH2_400M_050219_2,9200 DOHH2_400M_050219_2,9200,GEIPWSQEL True False GEIPWSQEL 53.530188 1058.51323240995 1497305.25 9199.0 ENSG00000140992|ENST00000342085|PDPK1;;nc|ENSG00000140992|O15530-3|PDPK1;;nc|ENSG00000140992|O15530-4|PDPK1;;nc|ENSG00000140992|O15530-2|PDPK1 5.977401415506999 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9201 53.541 629.0 246620.0 25 0 57647.0 + 31670 RRIYLILEY 9 79 619.866389426729 1237.718225920258 2 619.8663207888603 MULTI CID FTMS 0 0 0 9199 105980.859375 0.6897637915385965 -3 0.0451850891113281 2 Unmodified _RRIYLILEY_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;ENST00000584561.1_1_17:8109844-8110310:-|nuORF;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 71.13359017698441 0.0206607516130725 2 {I|L}{I|L}{I|L}EY 5 4 47.251 0.0 0.0 3.8176 0.0 0.0 588.34965712715 0.0 588.34965712715 0.0 25.11053454815091 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 + {I|L}{I|L}{I|L}EY 3.8176 + + 66 1 1.995 115396.9 1.0 5363 3836 9199 DOHH2_400M_050219_2,9201 DOHH2_400M_050219_2,9201,RRIYLILEY True True RRIYLILEY 53.541162 619.86632078886 867996.375 9199.0 ENST00000584561.1_1_17:8109844-8110310:-|nuORF;;nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;nc|ENSG00000178999|Q96GD4-2|AURKB;;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB 5.320228894551595 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9202 53.55 494.0 125460.0 25 0 8711.6 + 891 AEWEANPLI 9 91 1042.5207773371656 1041.5135008705656 1 1042.519946277142 MULTI CID FTMS 0 0 0 9199 107008.5625 0.5751747789243866 5 -0.1650390625 3 Unmodified _AEWEANPLI_ ENSG00000129197|ENST00000381209|RPAIN;ENST00000571043.5_1_17:5323428-5329403:+|nuORF;nc|ENSG00000129197|Q86UA6-2|RPAIN;nc|ENSG00000129197|Q86UA6-3|RPAIN;nc|ENSG00000129197|Q86UA6-4|RPAIN;nc|ENSG00000129197|Q86UA6-8|RPAIN;nc|ENSG00000129197|Q86UA6-9|RPAIN 75.76082778847304 0.0188720312721366 2 [WE]AEANP{I|L}{I|L} 9 2 + 82.573 0.0 0.0 7.9282 7.9282 83.834 0.0 0.0 0.0 3.26606256887672 16.478174818886373 3.26606256887672 2.3860585694618663 0 1.325257498915995 0.0 1.024227503252014 1.3494850021680094 [WE]AEANP{I|L}{I|L};[WE]EAANP{I|L}{I|L};{[CP]|[EA]}WEANP{I|L}{I|L};{[CP]|[EA]}N[NS]ANP{I|L}{I|L};[WE][RD]NP{I|L}{I|L};{[CP]|[EA]}GG[NS]ANP{I|L}{I|L};{[CP]|[EA]}N[NS]AGGP{I|L}{I|L};[WE]AEAGGP{I|L}{I|L};[WE]EAAGGP{I|L}{I|L};[WE]AN{[CP]|[EA]}P{I|L}{I|L} 7.9282;7.6991;7.6146;6.6417;5.7716;5.7618;5.7618;5.7484;5.5193;5.4436 -;-;+;-;-;-;-;-;-;- + 613 1 1.995 44576.9 1.0 5364 3836 9199 DOHH2_400M_050219_2,9202 DOHH2_400M_050219_2,9202,AEWEANPLI True True AEWEANPLI 53.549921 1042.51994627714 959816.1875 9199.0 nc|ENSG00000129197|Q86UA6-8|RPAIN;;ENSG00000129197|ENST00000381209|RPAIN;;nc|ENSG00000129197|Q86UA6-9|RPAIN;;ENST00000571043.5_1_17:5323428-5329403:+|nuORF;;nc|ENSG00000129197|Q86UA6-2|RPAIN;;nc|ENSG00000129197|Q86UA6-3|RPAIN;;nc|ENSG00000129197|Q86UA6-4|RPAIN 7.219830671946208 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9204 53.565 732.0 136170.0 25 0 19760.0 + 5289 DLASLCYMSL 10 103 558.2591133715835 1114.5036738099668 2 558.2591430544853 MULTI CID FTMS 0 0 0 9203 139709.59375 0.2830284368842573 5 -0.158966064453125 1 Unmodified _DLASLCYMSL_ REV__ENST00000407721.6_1_11:71145726-71146041:-|nuORF 24.020572477871973 0.4289996903560794 2 [{I|L}A]DS{I|L}C{M(Oxidation (M))|F}A{I|L}Y 10 -1 + 62.445 0.0 0.0 5.6029 5.6029 77.041 0.0 0.0 0.0 0.3296935994882943 17.48606012441968 0.3296935994882943 2.04628427264403 0 0.5 1.6989700043360187 0.7302046884880937 0.0 [{I|L}A]DS{I|L}C{M(Oxidation (M))|F}A{I|L}Y;[{I|L}A]D{I|L}SC{M(Oxidation (M))|F}A{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}AS{I|L}C{M(Oxidation (M))|F}A{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}A{I|L}SC{M(Oxidation (M))|F}A{I|L}Y;[{I|L}A]S{I|L}DC{M(Oxidation (M))|F}A{I|L}Y;[{I|L}A]SD{I|L}C{M(Oxidation (M))|F}A{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}SA{I|L}C{M(Oxidation (M))|F}A{I|L}Y;[{I|L}A]DS{I|L}C[MT]VY;[{I|L}A]D{I|L}SC[MT]VY;[{I|L}A]DS[{M(Oxidation (M))|F}T]W{I|L}Y 5.6029;5.4193;5.2459;5.0623;4.8791;4.7926;4.7057;4.5717;4.3881;4.3193 -;-;-;-;-;-;-;-;-;- 1806 1 1.995 80154.0 1.0 5365 3837 9203 DOHH2_400M_050219_2,9204 DOHH2_400M_050219_2,9204,DLASLCYMSL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9205 53.571 350.0 543950.0 25 0 52213.0 + 9173 FGGVLILIHR 10 99 562.8505386313166 1123.686524329433 2 562.8505737185478 MULTI CID FTMS 0 0 0 9203 225636.046875 0.1528745076919637 -4 0.0801010131835937 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 54.773552608820026 0.052133998764723 2 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 123.38 0.0 0.0 10.98 10.98 94.102 0.0 0.0 0.0 104.97412507785783 24.58803062383447 24.58803062383447 9.208187539523747 0 1.6237125054200234 2.0 0.0 1.8550083952587293 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;{I|L}VN{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HR;{I|L}VGG{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HR 10.98;10.161;9.9056;9.0861 -;-;-;- 594 + 1 1.995 147794.6 1.0 5366 3837 9203 DOHH2_400M_050219_2,9205 DOHH2_400M_050219_2,9205,FGGVLILIHR True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9206 53.585 752.0 114400.0 25 0 5623.8 -1 0 98 958.9591628643942 1915.9037727955883 2 959.9575073122978 MULTI CID FTMS 0 0 0 9203 125132.21875 0.5044527290244208 -8 0.1388015747070312 3 2 [KT][SG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ADQQA 11 -1 46.77 0.0 0.0 2.4412 0.0 0.0 0.0 732.2931002252561 732.2931002252561 21.06470026316768 0.0 0.0 0.0 0 0.0 0.0 0.0 1.1549471895720984 [KT][SG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ADQQA 2.4412 - 1352 + 1 1.995 61487.0 1.0 5367 3837 9203 DOHH2_400M_050219_2,9206 DOHH2_400M_050219_2,9206, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9207 53.598 800.0 63830.0 25 0 2614.0 -1 DIRTCHFCL 9 78 1164.5329225704834 1163.5256461038834 1 1165.530444324017 MULTI CID FTMS 0 0 0 9203 91418.1796875 1.0 0 0.0 4 Carbamidomethyl (C) _DIRTCHFC(Carbamidomethyl (C))L_ ENSG00000240053|ENST00000375864|LY6G5B 3.944395688203298 0.7769873103969335 2 DAVVQEAD 8 -1 30.61 0.0 0.0 2.6308 0.0 0.0 0.0 333.1311129205688 333.1311129205688 24.923975593035408 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DAVVQEAD 2.6308 - 578 + 1 1.995 37690.2 0.4300000071525574 5368 3837 9203 DOHH2_400M_050219_2,9207 DOHH2_400M_050219_2,9207,DIRTCHFCL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9209 53.603 33.0 1863300.0 25 0 250220.0 + 9176 FGGVLILIHR 10 67 375.5695490253568 1123.6868176762705 3 375.5693542361259 MULTI CID FTMS 0 0 0 9208 1648522.375 0.5492251566028394 -5 0.1286087036132812 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 2 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 88.962 0.0 0.0 7.9169 7.9169 92.269 0.0 0.0 0.0 75.57230065733648 22.770990859864497 22.770990859864497 9.208187539523747 0 0.6549471895720984 2.0 0.0 0.7797966019298022 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 7.9169;7.0975 -;- 110 + 1 1.995 60505.7 1.0 5369 3838 9208 DOHH2_400M_050219_2,9209 DOHH2_400M_050219_2,9209,FGGVLILIHR False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9210 53.612 473.0 182320.0 25 0 15016.0 + -1 MNWRYCRLWCL 11 98 837.3813485802551 1672.74814422731 2 837.3816406130791 MULTI CID FTMS 0 0 0 9208 89212.5703125 0.2952056572973999 6 -0.1218452453613281 2 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))NWRYC(Carbamidomethyl (C))RLWC(Carbamidomethyl (C))L_ REV__ENST00000584052.5_1_18:21043977-21044085:+|nuORF 1.4819007175156935 0.86815623132643 2 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 12 -1 80.972 0.0 0.0 4.8407 0.0 0.0 248.09132582832189 0.0 248.09132582832189 0.0 63.69193498491995 0.0 0.0 0 1.048455006504028 0.0 0.3807196863200844 0.7742275032520141 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 4.8407 - 470 1 1.995 63541.2 1.0 5370 3838 9208 DOHH2_400M_050219_2,9210 DOHH2_400M_050219_2,9210,MNWRYCRLWCL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9211 53.626 800.0 143610.0 25 0 35988.0 + 16514 KANPGAWIL 9 120 485.27945936375033 0 485.2792236208916 PEAK CID FTMS 0 0 0 9208 93300.765625 0.8356855456640911 -2 0.0834236145019531 3 Unmodified _KANPGAWIL_ ENSG00000102595|ENST00000376747|UGGT2;ENSG00000136731|ENST00000259253|UGGT1;nc|ENSG00000136731|Q9NYU2-2|UGGT1 44.40701690623563 0.0469661192146891 2 {I|L}WNKA 5 7 26.146 0.0 0.0 2.6996 0.0 0.0 131.09064372574443 222.08936487369377 353.1800085994382 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.6989700043360187 {I|L}WNKA 2.6996 - 594 + 1 1.995 92530.9 0.9399999976158142 5371 3838 9208 DOHH2_400M_050219_2,9211 DOHH2_400M_050219_2,9211,KANPGAWIL True True KANPGAWIL 53.625616 485.279223620892 705971.3125 9208.0 ENSG00000136731|ENST00000259253|UGGT1;;nc|ENSG00000136731|Q9NYU2-2|UGGT1;;ENSG00000102595|ENST00000376747|UGGT2 4.641676584879558 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9212 53.63 229.0 73486.0 25 0 3391.8 -1 0 46 976.1123467549804 2925.315210865141 3 976.7770873904228 MULTI CID FTMS 0 0 0 9208 104456.109375 0.5450772532185342 -6 0.1413459777832031 4 2 {I|L} 1 -1 5.4846 0.0 0.0 0.18749 0.0 0.0 2483.073677517288 326.13617883853755 2809.2098563558257 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.18749 - 5 + 1 1.995 21961.6 1.0 5372 3838 9208 DOHH2_400M_050219_2,9212 DOHH2_400M_050219_2,9212, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9213 53.644 791.0 17716.0 25 0 3061.0 -1 0 33 1065.9619348819408 0 1066.177172839642 PEAK CID FTMS 0 0 0 9208 12451.9697265625 0.4128196071245185 -1 0.0485076904296875 5 2 Q 1 -1 3.4949 0.0 0.0 0.16408 0.0 0.0 1060.5933511097817 938.2206514947874 1998.814002604569 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.16408 - 3 + 1 1.995 19936.6 1.0 5373 3838 9208 DOHH2_400M_050219_2,9213 DOHH2_400M_050219_2,9213, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9215 53.648 78.0 834700.0 25 0 59600.0 -1 0 68 902.4178235328366 1802.821094132473 2 902.9197265505792 MULTI CID FTMS 0 0 0 9214 618052.75 0.4395230479673038 6 -0.0806465148925781 1 2 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F}Y 12 -1 84.184 0.0 0.0 4.6696 0.0 0.0 0.0 355.1963508400367 355.1963508400367 66.43704802707865 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.3252574989159953 0.2887254899964357 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F}Y 4.6696 - 947 1 1.995 50276.9 1.0 5374 3839 9214 DOHH2_400M_050219_2,9215 DOHH2_400M_050219_2,9215, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9216 53.662 800.0 119590.0 25 0 15956.0 + 474 AEGDLVRLL 9 98 493.2875236978021 984.560494462404 2 493.2871887087822 MULTI CID FTMS 0 0 0 9214 113992.0390625 1.0 0 0.0 2 Unmodified _AEGDLVRLL_ ENSG00000100365|ENST00000248899|NCF4 69.10491478415734 0.0214449631113747 2 {[CP]|[EA]}GD{I|L}VR{I|L}{I|L} 9 0 {[CP]|[EA]} + + 57.894 3.7236 1.8611 5.8802 5.8802 59.017 0.0 0.0 0.0 0.0 9.74288708938645 0.0 0.0 0 1.7302046884880935 0.0 0.3494850021680094 0.3054621874040891 + + {[CP]|[EA]}GD{I|L}VR{I|L}{I|L} 5.8802 + + 180 + 1 1.995 76806.7 0.4099999964237213 5375 3839 9214 DOHH2_400M_050219_2,9216 DOHH2_400M_050219_2,9216,AEGDLVRLL True True AEGDLVRLL 53.662481 493.287188708782 519624.21875 9214.0 ENSG00000100365|ENST00000248899|NCF4 2.405157287915548 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9217 53.676 800.0 40726.0 25 0 1858.1 -1 0 73 1100.165332019329 0 1100.165332019329 PEAK CID FTMS 0 0 0 -1 0 3 2 C(Carbamidomethyl (C)) 1 -1 2.7642 0.0 0.0 0.12574 0.0 0.0 1210.2961048572145 824.9675387018186 2035.263643559033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.12574 - 6 + 1 1.995 25669.0 0.9100000262260436 5376 3839 9214 DOHH2_400M_050219_2,9217 DOHH2_400M_050219_2,9217, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9220 53.688 267.0 25422.0 25 0 2569.0 -1 0 22 980.19082563678 0 979.9932739138604 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 16149.0 1.0 5377 3841 9219 DOHH2_400M_050219_2,9220 DOHH2_400M_050219_2,9220, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9221 53.701 800.0 78492.0 25 0 6799.9 + 36873 TENPVIMGL 9 93 487.2547974313248 972.4950419294496 2 487.2549926638603 MULTI CID FTMS 0 0 0 9219 84297.53125 0.944245163690932 2 -0.0327949523925781 2 Unmodified _TENPVIMGL_ ENSG00000110367|ENST00000534980|DDX6;ENST00000525082.1_1_11:118639020-118656960:-|nuORF;ENST00000533239.1_1_11:118656759-118656960:-|nuORF 58.6788170122104 0.0268135626297836 2 [VP]N{I|L}ET 6 7 38.281 0.0 0.0 3.9364 0.0 0.0 0.0 316.1316178597627 316.1316178597627 16.598878259206842 0.0 0.0 0.0 0 0.4247425010840047 1.0969100130080565 0.3807196863200844 0.6861818737241735 [VP]N{I|L}ET 3.9364 - 172 1 1.995 53429.4 0.4199999868869781 5378 3841 9219 DOHH2_400M_050219_2,9221 DOHH2_400M_050219_2,9221,TENPVIMGL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9222 53.709 431.0 39182.0 25 0 2135.8 -1 0 42 1132.527514636517 0 1132.527514636517 PEAK CID FTMS 0 0 0 -1 0 3 2 P 1 -1 1.5938 0.0 0.0 0.070427 0.0 0.0 1183.0769276111216 979.9018038385374 2162.978731449659 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.070427 - 1 + 1 1.995 21187.9 1.0 5379 3841 9219 DOHH2_400M_050219_2,9222 DOHH2_400M_050219_2,9222, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9225 53.72 274.0 70527.0 25 0 1757.9 -1 0 53 859.5842773318291 0 859.5842773318291 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.995 24370.3 1.0 5380 3843 9224 DOHH2_400M_050219_2,9225 DOHH2_400M_050219_2,9225, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9228 53.741 800.0 120940.0 25 0 15092.0 + 36884 TEPPPLLVY 9 100 514.7867382978055 1027.558923662411 2 514.7866699099541 MULTI CID FTMS 0 0 0 9227 90803.984375 0.8497017138622857 -4 0.0440711975097656 1 Unmodified _TEPPPLLVY_ ENSG00000174231|ENST00000304992|PRPF8 60.38955033654506 0.025866396858536 2 {[HG]|PP}{I|L}P{I|L}VMVY 9 5 + 37.809 0.0 0.0 3.6795 3.6795 71.078 0.0 0.0 0.0 3.652792693512417 20.819328110613363 3.652792693512417 3.0102999566398125 0 0.8935078169319297 0.0 0.0 0.0 {[HG]|PP}{I|L}P{I|L}VMVY;{[HG]|PP}{I|L}{I|L}PVMVY;{[HG]|PP}{I|L}PV{I|L}MVY;{[ET]|[MV]}[YK]{I|L}{I|L}VY;{[DS]|[MA]|[CV]|TT}[YR]{I|L}{I|L}VY;{[HG]|PP}{[ET]|[MV]}P{I|L}{I|L}VY;{[HG]|PP}{I|L}{I|L}{[ET]|[MV]}PVY;[{I|L}P]P{I|L}{[ET]|[MV]}PVY;[{I|L}P]{I|L}P{[ET]|[MV]}PVY;[{I|L}P]{I|L}[RH]MVY 3.6795;3.3865;2.8571;2.576;2.2447;2.0397;1.9751;1.7765;1.6051;1.1472 -;-;-;-;-;-;-;-;-;- 378 1 1.995 78249.2 0.4799999892711639 5381 3845 9227 DOHH2_400M_050219_2,9228 DOHH2_400M_050219_2,9228,TEPPPLLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9229 53.748 403.0 285600.0 25 0 16775.0 -1 0 159 888.4569554415469 0 888.0191528201103 PEAK CID FTMS 0 0 0 -1 0 2 2 S 1 -1 5.4846 0.0 0.0 0.30901 0.0 0.0 1552.798556413564 132.04592310123283 1684.8444795147968 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.30901 - 136 + 1 1.995 74730.3 1.0 5382 3845 9227 DOHH2_400M_050219_2,9229 DOHH2_400M_050219_2,9229, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9231 53.765 800.0 84531.0 25 0 3289.5 -1 0 99 1051.5177045702485 2101.0208562072967 2 1052.520190417767 MULTI CID FTMS 0 0 0 9230 49871.8984375 0.3181774138801567 1 -0.0442161560058593 1 2 [MN]P 3 -1 25.942 0.0 0.0 1.2347 0.0 0.0 0.0 1755.8608579985655 1755.8608579985655 11.249387366083 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MN]P 1.2347 - 128 1 2.07 47193.8 0.550000011920929 5383 3846 9230 DOHH2_400M_050219_2,9231 DOHH2_400M_050219_2,9231, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9232 53.773 400.0 215640.0 25 0 19463.0 + 36874 TENPVIMGL 9 86 973.503864508952 972.496588042352 1 973.5008422732352 MULTI CID FTMS 0 0 0 9230 186543.09375 0.6367514871614026 3 -0.0645561218261718 2 Unmodified _TENPVIMGL_ ENSG00000110367|ENST00000534980|DDX6;ENST00000525082.1_1_11:118639020-118656960:-|nuORF;ENST00000533239.1_1_11:118656759-118656960:-|nuORF 103.35351024395868 0.0092202910191236 2 {[ET]|[MV]}NPV{I|L}MG{I|L} 9 0 + 92.304 0.0 0.0 9.4914 9.4914 95.587 0.0 0.0 0.0 12.028937514676484 16.478174818886373 12.028937514676484 12.028937514676484 0 1.0994850021680094 0.0 1.360924374808178 1.7856668758921828 + + {[ET]|[MV]}NPV{I|L}MG{I|L};[NP]VET{I|L}MG{I|L};{[ET]|[MV]}NPVM{I|L}G{I|L};[NP]VETM{I|L}G{I|L};{[ET]|[MV]}GGPV{I|L}MG{I|L};{[ET]|[MV]}N{I|L}[VP]MG{I|L};{[ET]|[MV]}GGPVM{I|L}G{I|L};[NP]V[KT]NMG{I|L};{[ET]|[MV]}NP[KT]NG{I|L};{[ET]|[MV]}N{I|L}{[NV]|[RG]}NG{I|L} 9.4914;8.2545;8.1868;6.9499;6.7084;6.4066;5.5489;5.4497;5.4044;5.0234 +;-;-;-;-;-;-;-;-;- + 730 1 2.07 66009.9 1.0 5384 3846 9230 DOHH2_400M_050219_2,9232 DOHH2_400M_050219_2,9232,TENPVIMGL True True TENPVIMGL 53.77258 973.500842273235 2305265.65625 9230.0 ENST00000525082.1_1_11:118639020-118656960:-|nuORF;;ENSG00000110367|ENST00000534980|DDX6;;ENST00000533239.1_1_11:118656759-118656960:-|nuORF 9.757670720418297 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9233 53.783 616.0 15181.0 25 0 796.71 -1 0 28 1000.4738562272933 0 1000.28819578886 PEAK CID FTMS 0 0 0 9230 20679.80859375 0.7955495469759564 -1 0.0235366821289062 3 2 T 1 -1 5.4846 0.0 0.0 0.27437 0.0 0.0 1739.5542665543926 155.30356775455314 1894.8578343089457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.27437 - 2 + 1 2.07 19406.0 1.0 5385 3846 9230 DOHH2_400M_050219_2,9233 DOHH2_400M_050219_2,9233, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9234 53.792 483.0 155250.0 25 0 44393.0 -1 0 56 645.3791561320494 644.3718796654493 1 645.3781005740166 MULTI CID FTMS 0 0 0 9230 88645.8984375 0.5582766053212316 1 -0.0442161560058593 4 2 NW 2 -1 21.454 0.0 0.0 3.3294 0.0 0.0 326.2390804484556 0.0 326.2390804484556 0.0 15.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.5 NW 3.3294 - 21 + 1 2.07 58985.8 1.0 5386 3846 9230 DOHH2_400M_050219_2,9234 DOHH2_400M_050219_2,9234, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9236 53.808 800.0 50486.0 25 0 887.97 -1 0 68 870.6422653332385 0 870.3449584841728 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 36124.1 0.3899999856948852 5387 3847 9235 DOHH2_400M_050219_2,9236 DOHH2_400M_050219_2,9236, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9239 53.817 49.0 1214000.0 25 0 126140.0 9174 FGGVLILIHR 10 66 562.8505386313166 1123.686524329433 2 562.8505737185478 MULTI CID FTMS 0 0 0 9238 826255.75 0.5598105566832615 8 -0.282073974609375 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 24.020572477871973 0.4289996903560794 2 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 108.14 0.0 0.0 9.6238 9.6238 93.789 0.0 0.0 0.0 97.6835973835231 13.46787486224656 13.46787486224656 9.208187539523747 0 1.6549471895720984 2.0 0.0 0.4247425010840047 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;{I|L}{M(Oxidation (M))|F}VN{I|L}{I|L}{I|L}HR;{I|L}{M(Oxidation (M))|F}VGG{I|L}{I|L}{I|L}HR 9.6238;8.8043;7.198;6.3786 -;-;-;- 141 + 1 2.07 51675.3 1.0 5388 3849 9238 DOHH2_400M_050219_2,9239 DOHH2_400M_050219_2,9239,FGGVLILIHR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9240 53.823 330.0 40615.0 25 0 2897.8 -1 0 36 967.960125793284 1933.905698653368 2 967.954638659954 MULTI CID FTMS 0 0 0 9238 48896.62890625 0.2292799493404083 -5 0.0919342041015625 2 2 [NP]{I|L}D 4 -1 16.198 0.0 0.0 0.83757 0.0 0.0 0.0 1491.673434819637 1491.673434819637 7.016675202793719 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}D 0.83757 - 15 1 2.07 20383.1 1.0 5389 3849 9238 DOHH2_400M_050219_2,9240 DOHH2_400M_050219_2,9240, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9241 53.827 195.0 457870.0 25 0 203830.0 + 36885 TEPPPLLVY 9 45 1028.5668214182133 1027.5595449516134 1 1028.568286120892 MULTI CID FTMS 0 0 0 9238 224743.1875 0.7854929729451069 2 -0.0765457153320312 3 Unmodified _TEPPPLLVY_ ENSG00000174231|ENST00000304992|PRPF8 36.04419817259434 0.0971720506436186 2 {[HG]|PP}[{I|L}P]{I|L}VMVY 9 4 + 35.864 0.0 0.0 3.4902 3.4902 79.804 0.0 0.0 0.0 3.925449767853316 15.418337434290455 3.925449767853316 11.136218907515318 0 0.0 0.0 0.0 0.0 {[HG]|PP}[{I|L}P]{I|L}VMVY;{[HG]|PP}[{I|L}P]{[ET]|[MV]}{I|L}VY;{[HG]|PP}{[ET]|[MV]}[{I|L}P]{I|L}VY;{[HG]|PP}[{I|L}P]{I|L}VY{[ET]|[MV]};{[HG]|PP}[{I|L}P][KA]PP[DP];{[HG]|PP}[{I|L}P]{I|L}{[HG]|PP}V[QA] 3.4902;2.4064;2.3126;1.8641;1.5543;0.21065 -;-;-;-;-;- 102 1 2.07 63136.6 1.0 5390 3849 9238 DOHH2_400M_050219_2,9241 DOHH2_400M_050219_2,9241,TEPPPLLVY True True TEPPPLLVY 53.826798 1028.56828612089 3175943.375 9238.0 ENSG00000174231|ENST00000304992|PRPF8 7.983184973398845 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9242 53.832 270.0 197410.0 25 0 12316.0 -1 0 77 880.8988384746388 1759.7831240160774 2 880.8986083865166 MULTI CID FTMS 0 0 0 9238 83939.296875 0.7756464081027037 -3 0.0645561218261718 4 2 {M(Oxidation (M))|F}ANQQAG 7 -1 48.532 0.0 0.0 2.7578 0.0 0.0 521.2910867966174 519.1511934869749 1040.4422802835925 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 {M(Oxidation (M))|F}ANQQAG 2.7578 - 444 + 1 2.07 44045.0 1.0 5391 3849 9238 DOHH2_400M_050219_2,9242 DOHH2_400M_050219_2,9242, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9243 53.846 800.0 51018.0 25 0 1210.7 -1 0 67 1179.220507800579 0 1179.220507800579 PEAK CID FTMS 0 0 0 -1 0 5 2 W 1 -1 3.9794 0.0 0.0 0.16887 0.0 0.0 1717.6380848376832 449.6994417779906 2167.337526615674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.16887 - 1 + 1 2.07 30416.8 0.449999988079071 5392 3849 9238 DOHH2_400M_050219_2,9243 DOHH2_400M_050219_2,9243, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9245 53.854 260.0 286750.0 25 0 24169.0 -1 0 88 958.9591628643942 1915.9037727955883 2 959.4605590701104 MULTI CID FTMS 0 0 0 9244 244892.1875 0.5678477955885612 7 -0.2486000061035156 1 2 {[QV]|[N{I|L}]|[RA]|[KV]}Y{[ES]|[DT]|[{I|L}C]}CPQQNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 91.787 0.0 0.0 4.7908 4.7908 54.63 0.0 0.0 0.0 3.640078085766092 60.0829128043512 3.640078085766092 0.0 0 1.3737125054200234 1.3979400086720375 0.0 1.1989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}Y{[ES]|[DT]|[{I|L}C]}CPQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[ES]|[DT]|[{I|L}C]}CPQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]V{[ES]|[DT]|[{I|L}C]}CPQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V{[ES]|[DT]|[{I|L}C]}CPQQNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T{[YD]|[{M(Oxidation (M))|F}M]}CPQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T{[YD]|[{M(Oxidation (M))|F}M]}CPQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]{M(Oxidation (M))|F}[PA]CPQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]{M(Oxidation (M))|F}[PA]CPQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[ES]|[DT]|[{I|L}C]}CPQ[AG]NA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[ES]|[DT]|[{I|L}C]}CPQQGGA{M(Oxidation (M))|F}YQV{I|L} 4.7908;4.7908;4.5022;4.5022;4.3846;4.3846;4.3451;4.3451;4.3203;4.3203 -;-;-;-;-;-;-;-;-;- 3361 1 2.07 57084.3 1.0 5393 3850 9244 DOHH2_400M_050219_2,9245 DOHH2_400M_050219_2,9245, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9246 53.861 364.0 284900.0 25 0 13273.0 -1 0 103 1164.537929249194 3490.5919583477817 3 1164.872851550579 MULTI CID FTMS 0 0 0 9244 295977.96875 0.5474147178593012 -2 0.0374259948730468 2 2 D{I|L}VQY{M(Oxidation (M))|F}ANQQAED 13 -1 57.486 0.0 0.0 1.6469 0.0 0.0 1632.7457191893816 333.1316012018188 1965.8773203912003 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 D{I|L}VQY{M(Oxidation (M))|F}ANQQAED 1.6469 - 4381 + 1 2.07 68693.7 1.0 5394 3850 9244 DOHH2_400M_050219_2,9246 DOHH2_400M_050219_2,9246, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9247 53.875 800.0 27129.0 25 0 1168.9 -1 0 53 1178.538745105267 0 1178.538745105267 PEAK CID FTMS 0 0 0 -1 0 3 2 Q 1 -1 2.4743 0.0 0.0 0.10506 0.0 0.0 1479.020836302528 744.9405611627561 2223.961397465284 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.10506 - 10 + 1 2.07 21874.6 0.4300000071525574 5395 3850 9244 DOHH2_400M_050219_2,9247 DOHH2_400M_050219_2,9247, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9248 53.889 800.0 24904.0 25 0 733.43 -1 0 52 1193.237841784954 0 1193.237841784954 PEAK CID FTMS 0 0 0 -1 0 4 2 {I|L} 1 -1 2.2185 0.0 0.0 0.093039 0.0 0.0 1167.6205067126832 1100.7623995416627 2268.382906254346 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.093039 - 1 + 1 2.07 20690.9 0.4199999868869781 5396 3850 9244 DOHH2_400M_050219_2,9248 DOHH2_400M_050219_2,9248, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9250 53.894 43.0 1030000.0 25 0 150310.0 + 9177 FGGVLILIHR 10 59 375.5695490253568 1123.6868176762705 3 375.5693847537041 MULTI CID FTMS 0 0 0 9249 822591.0 0.2740561351465347 8 -0.2496986389160156 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 24.020572477871973 0.4289996903560794 2 N{I|L}{I|L}{I|L}HR 6 5 49.201 0.0 0.0 4.3785 0.0 0.0 359.2232424409696 0.0 359.2232424409696 0.0 35.688812894078126 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 N{I|L}{I|L}{I|L}HR 4.3785 - 53 + 1 2.07 41261.8 1.0 5397 3851 9249 DOHH2_400M_050219_2,9250 DOHH2_400M_050219_2,9250,FGGVLILIHR False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9251 53.907 800.0 32951.0 25 0 857.86 -1 0 62 976.1123467549804 2925.315210865141 3 976.7804443240166 MULTI CID FTMS 0 0 0 9249 30815.90234375 0.1608048347337926 7 -0.2094039916992187 2 2 V 1 -1 6.9897 0.0 0.0 0.23894 0.0 0.0 2398.019142605179 425.2047213190063 2823.223863924185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.23894 - 5 + 1 2.07 28244.7 0.8100000023841858 5398 3851 9249 DOHH2_400M_050219_2,9251 DOHH2_400M_050219_2,9251, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9252 53.921 800.0 119780.0 25 0 11133.0 + 32941 SELKDFFQSY 10 112 632.2984405927655 1262.5823282523309 2 632.2973510622978 MULTI CID FTMS 0 0 0 9249 80906.6640625 0.9331677440632056 -1 0.0430717468261718 3 Unmodified _SELKDFFQSY_ ENSG00000145907|ENST00000356245|G3BP1 78.06048673739656 0.0186573233964999 2 {[ES]|[DT]|[{I|L}C]}{I|L}KD{M(Oxidation (M))|F}{M(Oxidation (M))|F}QSY 10 0 + 61.974 0.0 0.0 4.9085 4.9085 78.709 0.0 0.0 0.0 8.264837301042718 37.66469552077716 8.264837301042718 5.924778212679485 0 1.8182503180159344 0.0 1.2856668758921828 0.0 + + {[ES]|[DT]|[{I|L}C]}{I|L}KD{M(Oxidation (M))|F}{M(Oxidation (M))|F}QSY;{[ES]|[DT]|[{I|L}C]}{I|L}KD{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y{[QS]|[NT]};{[ES]|[DT]|[{I|L}C]}{I|L}[HA]QSNQSY;{[ES]|[DT]|[{I|L}C]}{I|L}KD{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG]SY;{[ES]|[DT]|[{I|L}C]}{I|L}[HA]QSNY{[QS]|[NT]};{[ES]|[DT]|[{I|L}C]}{I|L}[HA]QSGGQSY;{[ES]|[DT]|[{I|L}C]}{I|L}[HA]QSN[AG]SY;{[ES]|[DT]|[{I|L}C]}{I|L}[MT]{M(Oxidation (M))|F}S[KA]SY;{[ES]|[DT]|[{I|L}C]}{I|L}[HA][AG]SNQSY;{[ES]|[DT]|[{I|L}C]}{I|L}[HA]Q{I|L}{[ES]|[DT]|[{I|L}C]}SY 4.9085;4.4392;4.213;4.1826;3.7437;3.49;3.49;3.392;3.2323;3.0426 +;-;-;-;-;-;-;-;-;- + 3067 1 2.07 76140.6 0.9200000166893004 5399 3851 9249 DOHH2_400M_050219_2,9252 DOHH2_400M_050219_2,9252,SELKDFFQSY True True SELKDFFQSY 53.921219 632.297351062298 576183.8125 9249.0 ENSG00000145907|ENST00000356245|G3BP1 8.200103600819906 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9254 53.93 287.0 146140.0 25 0 10273.0 -1 0 69 902.4178235328366 1802.821094132473 2 902.918505847454 MULTI CID FTMS 0 0 0 9253 89204.234375 0.0634368457774676 19 -0.3421173095703125 1 2 {[QV]|[N{I|L}]|[RA]|[KV]}YC{[CP]|[EA]}QQNA{M(Oxidation (M))|F}Y 12 -1 54.792 0.0 0.0 3.0392 0.0 0.0 0.0 355.20461399014806 355.20461399014806 36.37517525248825 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}YC{[CP]|[EA]}QQNA{M(Oxidation (M))|F}Y 3.0392 - 494 1 2.07 34772.3 1.0 5400 3852 9253 DOHH2_400M_050219_2,9254 DOHH2_400M_050219_2,9254, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9255 53.94 523.0 150670.0 25 0 12197.0 + 7326 EEYQGVIAW 9 92 1094.5145104113417 1093.5072339447415 1 1094.513598620892 MULTI CID FTMS 0 0 0 9253 130099.1015625 0.7833681487860316 -1 0.0324630737304687 2 Unmodified _EEYQGVIAW_ ENSG00000105722|ENST00000222329|ERF;ENSG00000268041|ENST00000597630|ERFL;ENST00000596818.1_1_19:42754481-42759151:-|nuORF 96.11092074494114 0.0124975504059861 2 [YQ]EEGV{I|L}AW 9 4 + 90.363 0.0 0.0 8.2636 8.2636 90.753 0.0 0.0 0.0 10.228539256161596 9.208187539523747 9.208187539523747 8.46787486224656 0 0.3494850021680094 0.0 2.368415180652539 1.635151878060192 [YQ]EEGV{I|L}AW;[YQ]EER{I|L}AW;[YQ]ERE{I|L}AW;EEYQGV{I|L}AW;[YQ]GVEE{I|L}AW;[YQ]EEGVA{I|L}W;[YQ]EEG{I|L}VAW;[YQ]GNSGV{I|L}AW;[YQ]E[VG]E{I|L}AW;EEYQR{I|L}AW 8.2636;7.4892;7.4739;7.3282;7.1188;6.7997;6.7297;6.6741;6.6269;6.5539 -;-;-;+;-;-;-;-;-;- + 2594 1 2.07 53733.1 1.0 5401 3852 9253 DOHH2_400M_050219_2,9255 DOHH2_400M_050219_2,9255,EEYQGVIAW True True EEYQGVIAW 53.939625 1094.51359862089 1236212.875 9253.0 ENSG00000105722|ENST00000222329|ERF;;ENST00000596818.1_1_19:42754481-42759151:-|nuORF;;ENSG00000268041|ENST00000597630|ERFL 8.494481563568115 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9256 53.949 549.0 29714.0 25 0 1231.9 -1 0 42 1120.6900323177626 0 1120.276049792767 PEAK CID FTMS 0 0 0 9253 16750.248046875 0.5244564241933498 -1 0.0324630737304687 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 22798.7 1.0 5402 3852 9253 DOHH2_400M_050219_2,9256 DOHH2_400M_050219_2,9256, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9257 53.963 800.0 92943.0 25 0 9450.6 + 12366 GTELGNELFY 10 109 571.7712255614007 1141.5278981896013 2 571.7718994021416 MULTI CID FTMS 0 0 0 9253 101677.96875 1.0 0 0.0 4 Unmodified _GTELGNELFY_ ENSG00000126821|ENST00000247225|SGPP1 53.832793166522166 0.0576554960245129 2 {[QN]|[E{I|L}]|[KN]}NG{[SA]|[TG]}E{I|L}[Y{M(Oxidation (M))|F}] 10 5 + 36.938 0.0 0.0 3.2359 3.2359 72.62 0.0 0.0 0.0 5.602554773050969 5.602554773050969 5.602554773050969 5.602554773050969 0 0.5 1.0 1.0629529932484498 0.9247425010840048 {[QN]|[E{I|L}]|[KN]}NG{[SA]|[TG]}E{I|L}[Y{M(Oxidation (M))|F}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}E{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}Y;[TA]D{I|L}[NG]E{I|L}[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}N{[QS]|[NT]}E{I|L}[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}GGG{[SA]|[TG]}E{I|L}[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}NG{[SA]|[TG]}E{M(Oxidation (M))|F}[Y{I|L}];{[QN]|[E{I|L}]|[KN]}NG{M(Oxidation (M))|F}{[CP]|[EA]}S[Y{I|L}];{[SA]|[TG]}E{I|L}[NG]E{I|L}[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}NG{M(Oxidation (M))|F}{[WT]|[RM]}[Y{I|L}];[TA]D{I|L}[NG]E{M(Oxidation (M))|F}[Y{I|L}] 3.2359;2.7451;2.7374;2.5553;2.4331;2.3599;2.2974;2.2885;2.2526;1.8613 -;-;-;-;-;-;-;+;-;- + 858 1 2.07 59706.5 0.3600000143051147 5403 3852 9253 DOHH2_400M_050219_2,9257 DOHH2_400M_050219_2,9257,GTELGNELFY True True GTELGNELFY 53.963152 571.771899402142 631557.875 9253.0 ENSG00000126821|ENST00000247225|SGPP1 4.812314351399739 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9260 53.974 224.0 509320.0 25 0 14143.0 -1 0 148 957.9592942814028 1913.9040356296057 2 957.9606811404228 MULTI CID FTMS 0 0 0 9259 275629.53125 0.8868389036357787 1 -0.0915031433105468 1 2 [MN]{[MS]|[{M(Oxidation (M))|F}A]}QY{M(Oxidation (M))|F}AWWMN{I|L}G 14 -1 51.491 0.0 0.0 2.6903 0.0 0.0 0.0 151.05159937076408 151.05159937076408 21.567370618400645 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.7134679910804405 [MN]{[MS]|[{M(Oxidation (M))|F}A]}QY{M(Oxidation (M))|F}AWWMN{I|L}G 2.6903 - 2894 + 1 2.07 78697.5 1.0 5404 3854 9259 DOHH2_400M_050219_2,9260 DOHH2_400M_050219_2,9260, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9261 53.985 641.0 255920.0 25 0 38536.0 + 7856 ELLIRKLPF 9 101 564.8605190408817 1127.7064851485634 2 564.8604003787041 MULTI CID FTMS 0 0 0 9259 188294.421875 0.8463442697476407 -1 0.0035820007324218 2 Unmodified _ELLIRKLPF_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 92.65332237495696 0.0139087009896299 2 E{I|L}{I|L}{I|L}RK{I|L}P{M(Oxidation (M))|F} 9 0 + 82.586 0.0 0.0 7.3233 7.3233 84.885 0.0 0.0 0.0 4.361086529659019 3.8071968632008577 3.8071968632008577 3.8071968632008577 0 2.416386562212267 1.6989700043360187 0.0 0.3252574989159953 + + E{I|L}{I|L}{I|L}RK{I|L}P{M(Oxidation (M))|F};E{I|L}{I|L}{I|L}RK{I|L}{M(Oxidation (M))|F}P;{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}RK{I|L}P{M(Oxidation (M))|F};[RK]{I|L}{I|L}{I|L}E{I|L}P{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}RK[KT]Q;[RK]{I|L}{I|L}{I|L}{I|L}EP{M(Oxidation (M))|F};[RK]{I|L}{I|L}{I|L}E[KT]Q;[RK]{I|L}{I|L}NK[KT]Q;[RK]{I|L}{I|L}{I|L}Q[KT]E;[RK]{I|L}{I|L}{I|L}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E 7.3233;6.9857;6.9366;4.5785;4.3506;3.0634;1.9925;1.4987;1.4196;1.2787 +;-;+;-;-;-;-;-;-;- + 388 + 1 2.07 128716.9 1.0 5405 3854 9259 DOHH2_400M_050219_2,9261 DOHH2_400M_050219_2,9261,ELLIRKLPF True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9262 53.996 641.0 131000.0 25 0 9217.3 -1 0 126 880.8988384746388 1759.7831240160774 2 881.9524413943291 MULTI CID FTMS 0 0 0 -1 0 3 2 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 -1 22.932 0.0 0.0 1.3031 0.0 0.0 0.0 1416.547899977268 1416.547899977268 11.822581265925436 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 1.3031 - 244 1 2.07 55783.7 1.0 5406 3854 9259 DOHH2_400M_050219_2,9262 DOHH2_400M_050219_2,9262, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9263 54.01 800.0 32280.0 25 0 2288.8 -1 0 71 890.1070249152973 0 890.1069824099541 PEAK CID FTMS 0 0 0 9259 171381.84375 1.0 0 0.0 4 2 R 1 -1 6.9897 0.0 0.0 0.39308 0.0 0.0 1099.8964706296194 519.1696871393186 1619.066157768938 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.39308 - 5 + 1 2.07 25627.5 0.6499999761581421 5407 3854 9259 DOHH2_400M_050219_2,9263 DOHH2_400M_050219_2,9263, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9264 54.015 298.0 20581.0 25 0 1948.9 -1 0 20 978.8147537578386 0 978.3984252810478 PEAK CID FTMS 0 0 0 9259 24283.30859375 1.0 0 0.0 5 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 14712.3 1.0 5408 3854 9259 DOHH2_400M_050219_2,9264 DOHH2_400M_050219_2,9264, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9265 54.029 800.0 33928.0 25 0 1973.7 -1 0 66 879.6026272515577 0 879.2529785037041 PEAK CID FTMS 0 0 0 9259 28687.90234375 1.0 0 0.0 6 2 D 1 -1 3.9794 0.0 0.0 0.22646 0.0 0.0 1507.093653695695 132.04619775943596 1639.1398514551308 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.22646 - 3 + 1 2.07 25221.0 0.5899999737739563 5409 3854 9259 DOHH2_400M_050219_2,9265 DOHH2_400M_050219_2,9265, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9266 54.043 800.0 19748.0 25 0 1461.1 -1 MFHPNSKCFWK 11 44 749.3422119021416 0 749.3422119021416 PEAK CID FTMS 0 0 0 -1 0 7 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FHPNSKC(Carbamidomethyl (C))FWK_ ENST00000462569.5_1_21:46197196-46221663:-|nuORF;ENST00000490450.5_1_21:46197196-46221244:-|nuORF 0.3506318815782774 0.47618401536486 2 EV 2 -1 10.969 0.0 0.0 0.7329 0.0 0.0 1042.389336058386 223.14583765201408 1265.5351737104002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EV 0.7329 - 6 + 1 2.07 21395.5 0.4900000095367431 5410 3854 9259 DOHH2_400M_050219_2,9266 DOHH2_400M_050219_2,9266,MFHPNSKCFWK False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9267 54.058 800.0 20713.0 25 0 939.01 40594 VKWKRAFKKRR 11 54 751.9820023991618 0 751.7932006716728 PEAK CID FTMS 0 0 0 -1 0 8 Unmodified _VKWKRAFKKRR_ ENST00000277141.10_2_9:88967948-88968005:-|nuORF 0.0 0.4761840153648598 2 D 1 11 3.0989 0.0 0.0 0.20633 0.0 0.0 470.4271873160986 913.4944552057248 1383.9216425218235 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.20633 - 2 + 1 2.07 22025.3 0.4099999964237213 5411 3854 9259 DOHH2_400M_050219_2,9267 DOHH2_400M_050219_2,9267,VKWKRAFKKRR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9269 54.076 800.0 21505.0 25 0 2856.1 -1 0 41 760.6138793826103 0 760.6138793826103 PEAK CID FTMS 0 0 0 -1 0 1 2 A 1 -1 1.5938 0.0 0.0 0.10491 0.0 0.0 611.3600697009643 833.8039644830686 1445.164034184033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.10491 - 1 + 1 2.07 20062.6 0.3899999856948852 5412 3855 9268 DOHH2_400M_050219_2,9269 DOHH2_400M_050219_2,9269, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9270 54.082 351.0 228800.0 25 0 22887.0 + 29629 QMEPAAFQALY 11 97 634.8025327879427 1267.590512642685 2 634.8024169802666 MULTI CID FTMS 0 0 0 9268 161567.453125 0.6056566716074396 -6 0.2460403442382812 2 Unmodified _QMEPAAFQALY_ ENSG00000215845|ENST00000423014|TSTD1;nc|ENSG00000215845|Q8NFU3-2|TSTD1;nc|ENSG00000215845|Q8NFU3-3|TSTD1;nc|ENSG00000215845|Q8NFU3-4|TSTD1 125.52916310638032 0.0506670691211381 2 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[PA]A{M(Oxidation (M))|F}AGA{I|L}Y 12 2 + 88.316 0.0 0.0 6.9673 6.9673 83.721 0.0 0.0 0.0 12.138798199450804 11.382353118286233 11.382353118286233 3.6015144778263704 0 0.8182503180159344 0.958607314841775 2.161089237444783 2.2104093769761874 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[PA]A{M(Oxidation (M))|F}AGA{I|L}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[PA]A{M(Oxidation (M))|F}QA{I|L}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[PA]A{M(Oxidation (M))|F}AQ{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[PA]A{M(Oxidation (M))|F}AGA{I|L}Y;[AG]A{[QD]|[EN]|[WG]|[KD]|[RS]}NA{M(Oxidation (M))|F}AGA{I|L}Y;[AG]{M(Oxidation (M))|F}AAPEMQA{I|L}Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAPEMAGA{I|L}Y;[AG]{M(Oxidation (M))|F}AAPEMAGA{I|L}Y;[QA]{M(Oxidation (M))|F}APEMAGA{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[PA]A{M(Oxidation (M))|F}QA{I|L}Y 6.9673;6.6831;6.1106;6.0096;5.8715;5.8568;5.8107;5.8083;5.7939;5.7255 -;+;-;-;-;-;-;-;-;- + 1376 1 2.07 68261.3 1.0 5413 3855 9268 DOHH2_400M_050219_2,9270 DOHH2_400M_050219_2,9270,QMEPAAFQALY True True QMEPAAFQALY 54.082299 634.802416980267 3631602.0 9268.0 nc|ENSG00000215845|Q8NFU3-3|TSTD1;;nc|ENSG00000215845|Q8NFU3-2|TSTD1;;ENSG00000215845|ENST00000423014|TSTD1;;nc|ENSG00000215845|Q8NFU3-4|TSTD1 7.783594608306885 2.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9271 54.09 446.0 228770.0 25 0 25172.0 + 5170 DILKRLYEL 9 95 581.8453527584231 1161.6761525836462 2 581.8453857302666 MULTI CID FTMS 0 0 0 9268 139878.796875 0.9497676516772884 -4 0.16949462890625 3 Unmodified _DILKRLYEL_ ENSG00000106305|ENST00000223029|AIMP2 44.94466952835103 0.0514539652423294 2 {I|L}D{I|L}K 4 7 71.23 0.0 0.0 6.1317 0.0 0.0 0.0 689.3633713122415 689.3633713122415 50.75257498915995 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.6549471895720984 {I|L}D{I|L}K 6.1317 - 233 + 1 2.07 77749.3 1.0 5414 3855 9268 DOHH2_400M_050219_2,9271 DOHH2_400M_050219_2,9271,DILKRLYEL True True DILKRLYEL 54.090222 581.845385730267 798794.75 9268.0 ENSG00000106305|ENST00000223029|AIMP2 3.445775985717773 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9275 54.107 370.0 111200.0 25 0 3802.3 + -1 VESPLSVSF 9 61 964.967084965992 1927.919616998784 2 964.9683715701104 MULTI CID FTMS 0 0 0 9274 103634.21875 0.808687397760957 -1 0.003875732421875 1 ENSG00000145916|ENST00000313386|RMND5B;ENSG00000153561|ENST00000283632|RMND5A;nc|ENSG00000145916|Q96G75-2|RMND5B;ENST00000515360.5_1_5:177569546-177575030:+|nuORF 2 [{I|L}P]SEVSV 7 -1 32.272 0.0 0.0 1.6739 0.0 0.0 0.0 1213.5167679450851 1213.5167679450851 3.0651114423173453 0.0 0.0 0.0 0 0.0 1.154901959985743 1.305462187404089 0.0 [{I|L}P]SEVSV 1.6739 - 206 1 2.07 37575.1 1.0 5415 3858 9274 DOHH2_400M_050219_2,9275 DOHH2_400M_050219_2,9275, False False VESPLSVSF 54.107386 964.96837157011 1806449.25 9274.0 ENSG00000145916|ENST00000313386|RMND5B;;ENSG00000153561|ENST00000283632|RMND5A;;nc|ENSG00000145916|Q96G75-2|RMND5B;;ENST00000515360.5_1_5:177569546-177575030:+|nuORF 4.289604504903157 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9276 54.115 434.0 203050.0 25 0 17445.0 + 9175 FGGVLILIHR 10 85 562.8505386313166 1123.686524329433 2 562.8506347537041 MULTI CID FTMS 0 0 0 9274 133772.96875 0.090634794499294 17 -0.1937065124511718 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 54.773552608820026 0.052133998764723 2 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 107.38 0.0 0.0 9.5556 9.5556 93.746 0.0 0.0 0.0 88.36146841346121 21.72044985140652 21.72044985140652 9.208187539523747 0 1.2302046884880935 2.0 0.0 1.25 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 9.5556;8.7361 -;- 222 + 1 2.07 71378.8 1.0 5416 3858 9274 DOHH2_400M_050219_2,9276 DOHH2_400M_050219_2,9276,FGGVLILIHR True False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9277 54.125 539.0 326000.0 25 0 36654.0 + 23419 LTELPDWSY 9 104 1123.5299935350156 1122.5227170684157 1 1125.537402331829 MULTI CID FTMS 0 0 0 9274 297985.96875 0.5543900503695449 -11 0.3062896728515625 3 Unmodified _LTELPDWSY_ chr14:22830254-22830419|27|46.37|0.79|5.87|+|2|MRPL52,None|1;ENSG00000172590|ENST00000397496|MRPL52;ENST00000311892.10_1_14:23299153-23300177:+|nuORF;ENST00000553482.5_1_14:23299112-23299471:+|nuORF;ENST00000557543.5_1_14:23299153-23299471:+|nuORF;nc|ENSG00000172590|Q86TS9-4|MRPL52;nc|ENSG00000172590|Q86TS9|MRPL52 52.268347100219714 0.0353964759249114 2 [WD]PSKE{I|L}S 8 8 51.251 0.0 0.0 4.5657 0.0 0.0 0.0 177.0493643674969 177.0493643674969 13.213434054814035 0.0 0.0 0.0 0 0.0 2.0 1.668826521534556 0.805462187404089 [WD]PSKE{I|L}S 4.5657 - 4159 1 2.07 110366.9 1.0 5417 3858 9274 DOHH2_400M_050219_2,9277 DOHH2_400M_050219_2,9277,LTELPDWSY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9278 54.138 800.0 62809.0 25 0 7112.3 + 28692 PVRRWRHR 8 81 388.2328457079719 1161.6767077241157 3 388.2325012087822 MULTI CID FTMS 0 0 0 9274 85491.1875 1.0 0 0.0 4 Unmodified _PVRRWRHR_ REV__ENST00000460670.5_1_19:37096371-37096590:+|nuORF 3.944395688203298 0.8003900995685364 2 {I|L} 1 -1 14.604 0.0 0.0 1.2572 0.0 0.0 1030.5815824573172 0.0 1030.5815824573172 0.0 -6.351518780601921 -6.351518780601921 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2572 - 23 + 1 2.07 45056.7 0.9100000262260436 5418 3858 9274 DOHH2_400M_050219_2,9278 DOHH2_400M_050219_2,9278,PVRRWRHR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9280 54.155 800.0 145950.0 25 0 6261.2 -1 0 108 1164.537929249194 3490.5919583477817 3 1165.205859363079 MULTI CID FTMS 0 0 0 9279 218421.25 0.3733961070105713 7 -0.0680770874023437 1 2 [YQ]{M(Oxidation (M))|F}V{I|L}[DP]DAN{I|L}[NP]{M(Oxidation (M))|F}{I|L}NVQY{M(Oxidation (M))|F}ANQAGA[CS]M[Q{I|L}] 31 -1 [YQ]{M(Oxidation (M))|F}V{I|L}[DP]DAN{I|L}[NP]{M(Oxidation (M))|F}{I|L} + + 75.264 54.918 3.1439 2.1562 2.1562 47.62 0.0 0.0 0.0 0.0 20.345631714873065 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 [YQ]{M(Oxidation (M))|F}V{I|L}[DP]DAN{I|L}[NP]{M(Oxidation (M))|F}{I|L}NVQY{M(Oxidation (M))|F}ANQAGA[CS]M[Q{I|L}] 2.1562 - 21453 + 1 2.07 75448.0 0.6800000071525574 5419 3859 9279 DOHH2_400M_050219_2,9280 DOHH2_400M_050219_2,9280, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9281 54.16 279.0 234510.0 25 0 17389.0 + 23420 LTELPDWSY 9 84 562.2690031191777 1122.5234533051553 2 562.2689697146416 MULTI CID FTMS 0 0 0 9279 119610.7109375 0.650410646257963 -6 0.1752891540527343 2 Unmodified _LTELPDWSY_ chr14:22830254-22830419|27|46.37|0.79|5.87|+|2|MRPL52,None|1;ENSG00000172590|ENST00000397496|MRPL52;ENST00000311892.10_1_14:23299153-23300177:+|nuORF;ENST00000553482.5_1_14:23299112-23299471:+|nuORF;ENST00000557543.5_1_14:23299153-23299471:+|nuORF;nc|ENSG00000172590|Q86TS9-4|MRPL52;nc|ENSG00000172590|Q86TS9|MRPL52 50.855029805455786 0.0384952370514206 2 V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 8 8 32.804 0.0 0.0 2.9224 0.0 0.0 111.92373514284904 0.0 111.92373514284904 0.0 1.5439715936205545 0.0 0.0 0 0.0 0.0 0.0 0.0 V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 2.9224 - 232 + 1 2.07 56707.3 1.0 5420 3859 9279 DOHH2_400M_050219_2,9281 DOHH2_400M_050219_2,9281,LTELPDWSY True True LTELPDWSY 54.160001 562.268969714642 2681033.25 9279.0 ENST00000311892.10_1_14:23299153-23300177:+|nuORF;;chr14:22830254-22830419|27|46.37|0.79|5.87|+|2|MRPL52,None|1;;ENST00000557543.5_1_14:23299153-23299471:+|nuORF;;nc|ENSG00000172590|Q86TS9-4|MRPL52;;ENST00000553482.5_1_14:23299112-23299471:+|nuORF;;ENSG00000172590|ENST00000397496|MRPL52;;nc|ENSG00000172590|Q86TS9|MRPL52 5.61986780166626 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9283 54.169 270.0 198500.0 25 0 25251.0 + 9178 FGGVLILIHR 10 66 375.5695490253568 1123.6868176762705 3 375.5692321658134 MULTI CID FTMS 0 0 0 9282 151571.28125 0.0504978045451304 17 -0.1397590637207031 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 30.63653989081413 0.2803493085145199 2 N{I|L}{I|L}{I|L}HR 6 5 45.5 0.0 0.0 4.0491 0.0 0.0 359.22317437419446 0.0 359.22317437419446 0.0 34.799705268525955 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.5629529932484498 N{I|L}{I|L}{I|L}HR 4.0491 - 72 + 1 2.07 49439.0 1.0 5421 3860 9282 DOHH2_400M_050219_2,9283 DOHH2_400M_050219_2,9283,FGGVLILIHR False True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9287 54.188 486.0 157900.0 25 0 7022.3 -1 0 97 964.4987360387588 0 964.4977905154228 PEAK CID FTMS 0 0 0 9286 68974.2890625 0.5393081161674619 3 -0.0297622680664062 1 2 {I|L}NEAV{M(Oxidation (M))|F}SVSEVS 12 -1 81.813 0.0 0.0 4.2457 0.0 0.0 455.2481301812298 207.11438928775627 662.3625194689861 0.0 0.0 0.0 0.0 0 0.0 0.0 2.4035984316004217 0.0 {I|L}NEAV{M(Oxidation (M))|F}SVSEVS 4.2457 - 13377 + 1 2.07 57286.7 1.0 5422 3863 9286 DOHH2_400M_050219_2,9287 DOHH2_400M_050219_2,9287, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9290 54.207 690.0 107290.0 25 0 11670.0 -1 0 80 1092.5254207158114 2183.036288498423 2 1092.523242175579 MULTI CID FTMS 0 0 0 9289 44501.64453125 0.3526658503728022 -32 0.7221450805664062 1 2 [QP][QT]PPPP 8 -1 45.838 0.0 0.0 2.0997 0.0 0.0 0.0 1337.583692435261 1337.583692435261 15.077001478156816 0.0 0.0 0.0 0 1.0 0.0 0.3054621874040891 1.0387254899964358 [QP][QT]PPPP 2.0997 - 488 1 2.07 55955.4 1.0 5423 3865 9289 DOHH2_400M_050219_2,9290 DOHH2_400M_050219_2,9290, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9296 54.239 800.0 121600.0 25 0 17364.0 + 7857 ELLIRKLPF 9 90 564.8605190408817 1127.7064851485634 2 564.8604003787041 MULTI CID FTMS 0 0 0 9295 83393.8984375 0.374838231380798 15 -0.1298866271972656 1 Unmodified _ELLIRKLPF_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 82.5293158979368 0.0169039238599547 2 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}RK{I|L}P{M(Oxidation (M))|F} 9 0 + 80.459 0.0 0.0 7.1348 7.1348 85.163 0.0 0.0 0.0 4.602868501927873 4.602868501927873 4.602868501927873 4.602868501927873 0 2.298455006504028 1.6989700043360187 1.416386562212267 0.0 + + {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}RK{I|L}P{M(Oxidation (M))|F};E{I|L}{I|L}{I|L}RK{I|L}P{M(Oxidation (M))|F};E{I|L}{I|L}{I|L}RK{I|L}{M(Oxidation (M))|F}P;{I|L}{I|L}E{I|L}RK{I|L}P{M(Oxidation (M))|F};[RK]{I|L}{I|L}{I|L}E{I|L}P{M(Oxidation (M))|F};{I|L}{I|L}[RK]{I|L}E{I|L}P{M(Oxidation (M))|F};[RK]{I|L}{I|L}{I|L}P{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F};{I|L}{I|L}[RK]{I|L}P{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 7.1348;6.7266;6.3582;4.4803;3.7485;3.4448;0.4118;0.10815 +;+;-;-;-;-;-;- + 175 1 2.07 79448.5 0.9900000095367432 5424 3870 9295 DOHH2_400M_050219_2,9296 DOHH2_400M_050219_2,9296,ELLIRKLPF True True ELLIRKLPF 54.238867 564.860400378704 3201599.75 9295.0 ENSG00000275379|ENST00000616365|H3C11;;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000163041|ENST00000366815|H3-3A;;ENSG00000197153|ENST00000359303|H3C12;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000188375|ENST00000340398|H3-5 6.508402188618978 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9297 54.249 605.0 135840.0 25 0 6392.1 -1 0 114 902.9122671775792 1803.8099814219584 2 902.9150268435478 MULTI CID FTMS 0 0 0 9295 98913.78125 1.0 0 0.0 2 2 [KT]EY{M(Oxidation (M))|F}WQQAECVC(Carbamidomethyl (C)){I|L} 14 -1 + 75.48 0.0 0.0 4.1845 4.1845 72.676 0.0 0.0 0.0 49.28177515022461 6.989700043360188 6.989700043360188 3.0102999566398125 0 0.0 0.0 0.0 0.2887254899964357 [KT]EY{M(Oxidation (M))|F}WQQAECVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}WQQAECC(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ADQQA{M(Oxidation (M))|F}[PS]C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}WQ[AG]AECVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}W[AG]QAECVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}WQQAECV[CG]{I|L};[KT]EY{M(Oxidation (M))|F}W[AG]QAECC(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}WQQAEC[CG]V{I|L};[KT]EY{M(Oxidation (M))|F}WQ[AG]AECC(Carbamidomethyl (C))V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}[RP]H{I|L} 4.1845;4.0176;3.7149;3.6827;3.6827;3.6827;3.5158;3.5158;3.5158;3.4992 -;-;-;-;-;-;-;-;-;- 2279 + 1 2.07 60082.9 1.0 5425 3870 9295 DOHH2_400M_050219_2,9297 DOHH2_400M_050219_2,9297, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9298 54.263 800.0 33101.0 25 0 1106.6 -1 0 68 1188.5520583642217 0 1188.224169909954 PEAK CID FTMS 0 0 0 9295 72025.7734375 0.9830843321230808 5 -0.0693702697753906 3 2 A 1 -1 5.4846 0.0 0.0 0.23092 0.0 0.0 1575.734509704035 725.2850435846311 2301.019553288666 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.23092 - 8 + 1 2.07 25979.0 0.4199999868869781 5426 3870 9295 DOHH2_400M_050219_2,9298 DOHH2_400M_050219_2,9298, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9301 54.284 800.0 57457.0 25 0 3041.4 -1 0 94 958.9650893086642 0 958.9562255740166 PEAK CID FTMS 0 0 0 9300 103074.4765625 1.0 0 0.0 1 2 VC(Carbamidomethyl (C)) 2 -1 8.5835 0.0 0.0 0.44801 0.0 0.0 1525.7246294456502 128.07216821842033 1653.7967976640705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VC(Carbamidomethyl (C)) 0.44801 - 54 + 1 2.07 39014.9 0.4199999868869781 5427 3872 9300 DOHH2_400M_050219_2,9301 DOHH2_400M_050219_2,9301, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9310 54.324 472.0 33767.0 25 0 1886.8 -1 0 43 1108.5666338143192 0 1108.606982409954 PEAK CID FTMS 0 0 0 9309 39230.41796875 1.0 0 0.0 1 2 V 1 -1 6.9897 0.0 0.0 0.31555 0.0 0.0 1387.7025902831322 725.3240450494749 2113.026635332607 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.31555 - 1 + 1 2.07 21694.5 1.0 5428 3880 9309 DOHH2_400M_050219_2,9310 DOHH2_400M_050219_2,9310, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9313 54.344 800.0 113460.0 25 0 8631.4 + 45401 YTAVVPLVY 9 91 1024.5711040509198 1023.5638275843196 1 1027.578784167767 MULTI CID FTMS 0 0 0 9312 78444.53125 0.0274842819327124 -14 0.1134147644042968 1 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 30.22481116460888 0.1466181017706357 2 [{I|L}P][HS]V{I|L}VV 8 6 35.65 0.0 0.0 3.483 0.0 0.0 0.0 176.04604128965096 176.04604128965096 22.04778945219719 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.8065533887547016 0.0 [{I|L}P][HS]V{I|L}VV 3.483 - 360 1 2.07 65694.1 0.4199999868869781 5429 3882 9312 DOHH2_400M_050219_2,9313 DOHH2_400M_050219_2,9313,YTAVVPLVY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9318 54.373 800.0 101130.0 25 0 8620.3 + 29630 QMEPAAFQALY 11 104 634.8025327879427 1267.590512642685 2 634.8024169802666 MULTI CID FTMS 0 0 0 9317 76138.6875 0.2854158010161365 25 -0.416412353515625 1 Unmodified _QMEPAAFQALY_ ENSG00000215845|ENST00000423014|TSTD1;nc|ENSG00000215845|Q8NFU3-2|TSTD1;nc|ENSG00000215845|Q8NFU3-3|TSTD1;nc|ENSG00000215845|Q8NFU3-4|TSTD1 114.20165948288296 0.0227281746564865 2 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EAPA{M(Oxidation (M))|F}QA{I|L}Y 11 2 + 80.774 0.0 0.0 6.3723 6.3723 87.161 0.0 0.0 0.0 18.564921830680674 11.30266382157346 11.30266382157346 9.128498242810991 0 0.8182503180159344 0.0 2.2302046884880937 2.1318108876706967 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EAPA{M(Oxidation (M))|F}QA{I|L}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EAPA{M(Oxidation (M))|F}[AG]A{I|L}Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAPAQEM{I|L}Y;[QA]{M(Oxidation (M))|F}APAQEM{I|L}Y;[{I|L}A][C(Carbamidomethyl (C))D]PA{M(Oxidation (M))|F}QA{I|L}Y;[{I|L}A]QAMAQEM{I|L}Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAPA[AG]EM{I|L}Y;{[MS]|[{M(Oxidation (M))|F}A]}GAAPAQEM{I|L}Y;[{I|L}A]{[DS]|[MA]|[CV]|TT}QAQEM{I|L}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EKEEQA{I|L}Y 6.3723;5.6521;4.9077;4.7509;4.7146;4.5032;4.1875;4.1826;4.1268;4.1066 -;-;-;-;-;-;-;-;-;- 1096 1 2.07 68536.1 0.3700000047683716 5430 3886 9317 DOHH2_400M_050219_2,9318 DOHH2_400M_050219_2,9318,QMEPAAFQALY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9322 54.39 395.0 12405.0 25 0 1366.0 -1 0 15 1041.0012952803609 0 1040.649096667767 PEAK CID FTMS 0 0 0 9321 26596.640625 1.0 0 0.0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 17131.1 1.0 5431 3889 9321 DOHH2_400M_050219_2,9322 DOHH2_400M_050219_2,9322, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9325 54.412 800.0 170840.0 25 0 21461.0 + 45403 YTAVVPLVY 9 109 512.789371527132 1023.564190121064 2 512.7891113162041 MULTI CID FTMS 0 0 0 9324 119017.765625 0.1511127427193614 -7 0.0456962585449218 1 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 89.42679046578446 0.015225546354407 2 [YT]AVVP{I|L}VY 9 0 + 70.613 0.0 0.0 6.8987 6.8987 85.845 0.0 0.0 0.0 14.617260673371746 11.0827208845118 11.0827208845118 5.981362441963327 0 1.242992819099939 1.3010299956639813 1.885151878060192 0.0 + + [YT]AVVP{I|L}VY;[YT]VAVP{I|L}VY;[YT]AVP{I|L}VVY;[YV]TAVP{I|L}VY;[YT]VAP{I|L}VVY;[YT]AVPV{I|L}VY;[YT]AP{I|L}VVVY;[{I|L}P]VYTAVVY;{[VA]|[{I|L}G]}TYVP{I|L}VY;[YT]APV{I|L}VVY 6.8987;6.3144;5.9827;5.4707;5.3984;5.3167;5.2668;4.9696;4.8645;4.7851 +;-;-;-;-;-;-;-;-;- + 1511 1 2.07 107769.1 0.4600000083446502 5432 3891 9324 DOHH2_400M_050219_2,9325 DOHH2_400M_050219_2,9325,YTAVVPLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9326 54.418 344.0 56564.0 25 0 3261.8 -1 0 45 1164.537929249194 3490.5919583477817 3 1164.874926745892 MULTI CID FTMS 0 0 0 9324 115634.5078125 0.2138673757925735 39 -0.50311279296875 2 2 A 1 -1 6.9897 0.0 0.0 0.20024 0.0 0.0 2327.076285595632 1089.4354952447875 3416.51178084042 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.20024 - 15 + 1 2.07 20078.7 1.0 5433 3891 9324 DOHH2_400M_050219_2,9326 DOHH2_400M_050219_2,9326, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9327 54.432 800.0 25546.0 25 0 2202.6 -1 0 52 1154.757495105267 0 1154.757495105267 PEAK CID FTMS 0 0 0 -1 0 3 2 {I|L} 1 -1 4.6041 0.0 0.0 0.19953 0.0 0.0 1458.0714954822154 733.3061007135374 2191.3775961957526 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.19953 - 4 + 1 2.07 22060.4 0.4900000095367431 5434 3891 9324 DOHH2_400M_050219_2,9327 DOHH2_400M_050219_2,9327, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9330 54.442 194.0 242910.0 25 0 28293.0 45776 YYKDDVFI 8 42 531.762762291516 1061.5109716498318 2 531.7627441287041 MULTI CID FTMS 0 0 0 9329 188742.453125 0.65593181555068 -1 0.0038948059082031 1 Unmodified _YYKDDVFI_ ENSG00000178502|ENST00000319121|KLHL11 4.75600775471527 0.7954636275367004 2 YV 2 6 20.969 0.0 0.0 1.9754 0.0 0.0 0.0 796.3578514368426 796.3578514368426 13.979400086720377 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YV 1.9754 - 5 + 1 2.07 43085.4 1.0 5435 3893 9329 DOHH2_400M_050219_2,9330 DOHH2_400M_050219_2,9330,YYKDDVFI False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9331 54.456 800.0 116250.0 25 0 5621.1 + 35532 STNAYMLIY 9 92 1075.5128515653153 1074.505575098715 1 1075.515185534954 MULTI CID FTMS 0 0 0 9329 128038.71875 0.9879038864408396 1 -0.0335922241210937 2 Unmodified _STNAYMLIY_ ENSG00000170242|ENST00000527733|USP47;nc|ENSG00000170242|Q96K76-2|USP47;nc|ENSG00000170242|Q96K76|USP47 56.17704186161178 0.0281986971544335 2 {[QS]|[NT]}SAYM{I|L}{I|L}Y 9 2 + 61.819 0.0 0.0 5.7533 5.7533 76.351 0.0 0.0 0.0 9.933787369250169 24.902953031565858 9.933787369250169 0.9691001300805624 0 0.3935078169319297 0.0 1.555462187404089 1.1237125054200234 {[QS]|[NT]}SAYM{I|L}{I|L}Y;{[QS]|[NT]}ASYM{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYM{I|L}{I|L}Y;{[QS]|[NT]}S{M(Oxidation (M))|F}SM{I|L}{I|L}Y;{[QS]|[NT]}AYSM{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YEM{I|L}{I|L}Y;{[QS]|[NT]}SAY{I|L}M{I|L}Y;{[QS]|[NT]}ASY{I|L}M{I|L}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}EM{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EY{I|L}M{I|L}Y 5.7533;5.6631;4.8288;4.5109;4.4207;4.1943;4.1447;4.0545;4.0304;3.5454 -;-;-;-;-;-;-;-;-;- 2416 1 2.07 63504.8 0.6499999761581421 5436 3893 9329 DOHH2_400M_050219_2,9331 DOHH2_400M_050219_2,9331,STNAYMLIY True True STNAYMLIY 54.455619 1075.51518553495 881404.375 9329.0 ENSG00000170242|ENST00000527733|USP47;;nc|ENSG00000170242|Q96K76|USP47;;nc|ENSG00000170242|Q96K76-2|USP47 5.1006973584493 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9332 54.469 800.0 63171.0 25 0 6713.8 + 6461 EAFLKHILSV 10 97 578.8398476955792 1155.6651424579584 2 578.8384277224541 MULTI CID FTMS 0 0 0 9329 89116.5234375 1.0 0 0.0 3 Unmodified _EAFLKHILSV_ ENSG00000196465|ENST00000695999|MYL6B;ENST00000548548.1_1_12:56551205-56551507:+|nuORF;ENST00000549178.5_1_12:56548807-56551507:+|nuORF 63.22749603027936 0.0281198777558511 2 K{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}W 7 6 32.796 0.0 0.0 2.8379 0.0 0.0 250.1442738263688 0.0 250.1442738263688 0.0 9.48206988169865 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 K{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}W 2.8379 - 143 1 2.07 41531.1 0.4900000095367431 5437 3893 9329 DOHH2_400M_050219_2,9332 DOHH2_400M_050219_2,9332,EAFLKHILSV True True EAFLKHILSV 54.469451 578.838427722454 412801.21875 9329.0 ENST00000548548.1_1_12:56551205-56551507:+|nuORF;;ENST00000549178.5_1_12:56548807-56551507:+|nuORF;;ENSG00000196465|ENST00000695999|MYL6B 6.7421213785807295 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9334 54.485 800.0 34752.0 25 0 1092.4 -1 0 59 1180.694628894329 0 1180.694628894329 PEAK CID FTMS 0 0 0 -1 0 1 2 K 1 -1 5.4846 0.0 0.0 0.23246 0.0 0.0 1798.3410267322145 429.9282930963501 2228.2693198285647 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.23246 - 4 + 1 2.07 24540.0 0.3700000047683716 5438 3894 9333 DOHH2_400M_050219_2,9334 DOHH2_400M_050219_2,9334, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9335 54.493 447.0 161010.0 25 0 31863.0 -1 0 45 1043.544306524455 2085.074060115709 2 1044.045581042767 MULTI CID FTMS 0 0 0 9333 178810.515625 1.0 0 0.0 2 2 [{I|L}P]V[HS][{I|L}P]V 8 -1 27.452 0.0 0.0 1.3166 0.0 0.0 0.0 1239.56132742184 1239.56132742184 20.462659351691528 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 [{I|L}P]V[HS][{I|L}P]V 1.3166 - 121 1 2.07 55968.3 1.0 5439 3894 9333 DOHH2_400M_050219_2,9335 DOHH2_400M_050219_2,9335, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9336 54.498 227.0 290730.0 25 0 132020.0 -1 LCLPSWRM 8 26 1062.5235564972645 1061.5162800306643 1 1062.524829089642 MULTI CID FTMS 0 0 0 9333 223034.578125 0.6204843095969677 -8 0.1126823425292968 3 Carbamidomethyl (C) _LC(Carbamidomethyl (C))LPSWRM_ ENST00000596921.5_1_19:58912885-58926968:+|nuORF 0.7936320650641473 0.8195151834710337 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 52210.3 1.0 5440 3894 9333 DOHH2_400M_050219_2,9336 DOHH2_400M_050219_2,9336,LCLPSWRM False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9337 54.506 453.0 18042.0 25 0 1815.3 -1 0 24 1060.084277331829 0 1060.084277331829 PEAK CID FTMS 0 0 0 -1 0 4 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 17530.2 1.0 5441 3894 9333 DOHH2_400M_050219_2,9337 DOHH2_400M_050219_2,9337, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9338 54.52 800.0 15733.0 25 0 822.07 -1 0 36 1151.354785144329 0 1151.354785144329 PEAK CID FTMS 0 0 0 -1 0 5 2 {M(Oxidation (M))|F} 1 -1 2.4743 0.0 0.0 0.10754 0.0 0.0 1150.1246571033082 1000.4680880182248 2150.592745121533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.10754 - 1 + 1 2.07 19118.3 0.4199999868869781 5442 3894 9333 DOHH2_400M_050219_2,9338 DOHH2_400M_050219_2,9338, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9340 54.537 800.0 45530.0 25 0 5135.7 + 385 AEDLGGPYVW 10 58 1106.512770303602 1105.5054938370022 1 1107.515307605267 MULTI CID FTMS 0 0 0 9339 37868.37890625 0.2983805775929453 1 -0.0483589172363281 1 Unmodified _AEDLGGPYVW_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 20.453626601364224 0.5043500229302764 2 G{M(Oxidation (M))|F}[HC]V{[QG]|[NA]} 7 9 19.239 0.0 0.0 1.7403 0.0 0.0 359.1846835225603 0.0 359.1846835225603 0.0 -1.9593180015394296 -1.9593180015394296 0.0 0 0.3252574989159953 0.0 0.0 0.0 G{M(Oxidation (M))|F}[HC]V{[QG]|[NA]} 1.7403 - 195 1 2.07 32044.0 0.4099999964237213 5443 3895 9339 DOHH2_400M_050219_2,9340 DOHH2_400M_050219_2,9340,AEDLGGPYVW False True AEDLGGPYVW 54.537011 1107.51530760527 903872.0625 9339.0 ENST00000548852.5_1_12:96397735-96429337:-|nuORF;;nc|ENSG00000111144|P09960-2|LTA4H;;nc|ENSG00000111144|P09960-4|LTA4H;;nc|ENSG00000111144|P09960-3|LTA4H;;ENSG00000111144|ENST00000228740|LTA4H 4.406386852264404 1.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9341 54.544 409.0 139420.0 25 0 12395.0 + 39113 TYAQPEVQI 9 79 524.7681824697618 1047.5218120063234 2 524.7673828005791 MULTI CID FTMS 0 0 0 9339 102504.515625 0.6729824035164244 -2 0.08380126953125 2 Unmodified _TYAQPEVQI_ REV__ENSG00000185920|ENST00000331920|PTCH1;REV__ENST00000375290.6_3_9:98215758-98232201:-|nuORF;REV__nc|ENSG00000185920|Q13635-2|PTCH1;REV__nc|ENSG00000185920|Q13635-3|PTCH1;REV__nc|ENSG00000185920|Q13635-4|PTCH1 10.823927491677226 0.5436922275383211 2 VY 2 -1 16.454 0.0 0.0 1.5707 0.0 0.0 767.3780264612047 0.0 767.3780264612047 0.0 2.764618041732444 0.0 0.0 0 0.0 0.0 0.0 0.0 VY 1.5707 - 88 + 1 2.07 51299.8 1.0 5444 3895 9339 DOHH2_400M_050219_2,9341 DOHH2_400M_050219_2,9341,TYAQPEVQI False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9342 54.558 800.0 88352.0 25 0 8323.9 + 33034 SEPFHLIVSY 10 82 596.305941283719 1190.597329634238 2 596.3055908083916 MULTI CID FTMS 0 0 0 9339 86916.5546875 0.7975518691355632 -3 0.0876960754394531 3 Unmodified _SEPFHLIVSY_ chr1:161710912-161711226|11|13.18|0.0|11.73|+|2|FCRLA,None|1;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-13|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-6|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 58.6788170122104 0.0400518768368984 2 [H{I|L}]M{I|L}{I|L}VSESY 10 7 + 57.449 0.0 0.0 4.8252 4.8252 74.027 0.0 0.0 0.0 7.3110945812106465 7.3110945812106465 7.3110945812106465 2.1053190375958764 0 0.8935078169319297 0.8860566476931632 0.4247425010840047 0.0 [H{I|L}]M{I|L}{I|L}VSESY;[H{I|L}]M{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}VSY;[H{I|L}]{I|L}M{I|L}VSESY;[H{I|L}]{I|L}M{I|L}{[ES]|[DT]|[{I|L}C]}VSY;[HM]ESV{I|L}{I|L}{I|L}SY;[H{I|L}]{I|L}{M(Oxidation (M))|F}PVSESY;[HM]V{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{I|L}SY;[H{I|L}]{I|L}{M(Oxidation (M))|F}P{[ES]|[DT]|[{I|L}C]}VSY 4.8252;4.6484;4.5724;4.3956;4.2112;4.0667;4.0343;3.8899 -;-;-;-;-;-;-;- 240 1 2.07 61827.4 0.3400000035762787 5445 3895 9339 DOHH2_400M_050219_2,9342 DOHH2_400M_050219_2,9342,SEPFHLIVSY True True SEPFHLIVSY 54.55815 596.305590808392 720459.4375 9339.0 ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-3|FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;nc|ENSG00000132185|Q7L513-6|FCRLA;;chr1:161710912-161711226|11|13.18|0.0|11.73|+|2|FCRLA,None|1;;nc|ENSG00000132185|Q7L513-13|FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-8|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA 6.820035457611084 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9343 54.568 563.0 375120.0 25 0 260500.0 + 43028 VYAFIVSFT 9 32 1046.5529219663056 1045.5456454997056 1 1048.560351550579 MULTI CID FTMS 0 0 0 9339 189808.59375 0.4390971502557898 -7 0.1428489685058593 4 Unmodified _VYAFIVSFT_ REV__ENSG00000148110|ENST00000375344|MFSD14B;REV__nc|ENSG00000148110|Q5SR56-2|MFSD14B 3.944395688203298 0.7769873103969335 2 A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3 -1 10.458 0.0 0.0 1.0002 0.0 0.0 712.3763294904312 0.0 712.3763294904312 0.0 10.368931070804594 0.0 0.0 0 0.0 0.0 0.0 0.0 A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.0002 - 3 1 2.07 140395.5 1.0 5446 3895 9339 DOHH2_400M_050219_2,9343 DOHH2_400M_050219_2,9343,VYAFIVSFT False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9345 54.584 800.0 15337.0 25 0 4647.3 -1 0 23 1074.141772449017 0 1074.141772449017 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 19660.3 0.4600000083446502 5447 3896 9344 DOHH2_400M_050219_2,9345 DOHH2_400M_050219_2,9345, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9346 54.598 800.0 94940.0 25 0 10800.0 + 24339 MEKSFSDLF 9 96 552.2577533706843 1102.5009538081686 2 552.2574951052666 MULTI CID FTMS 0 0 0 9344 132465.09375 1.0 0 0.0 2 Unmodified _MEKSFSDLF_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000404054.3_1_4:1742398-1742845:+|nuORF;ENST00000470808.1_1_4:1741140-1742845:+|nuORF 34.93206674587334 0.1032771302489716 2 [YE]GSKEM{I|L}{M(Oxidation (M))|F} 9 5 + 54.531 0.0 0.0 4.9461 4.9461 77.979 0.0 0.0 0.0 3.65279269351241 39.9118084610614 3.65279269351241 4.796962438796157 0 0.8252574989159953 0.0 1.4674165578762484 0.0 [YE]GSKEM{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KSAYD{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[CS]K{M(Oxidation (M))|F}M{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[CS]KYD{I|L}{M(Oxidation (M))|F};[MT]{[DA]|[EG]}KYD{I|L}{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}]E[RN]D{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[SA]|[TG]}KYD{I|L}{M(Oxidation (M))|F};[MT][VG]SAYD{I|L}{M(Oxidation (M))|F};[NP]A[YT]YD{I|L}{M(Oxidation (M))|F};[NP][YT]AYD{I|L}{M(Oxidation (M))|F} 4.9461;4.511;4.1516;4.0793;3.7902;3.7592;3.7427;3.7233;3.6769;3.4039 -;-;-;-;-;-;-;-;-;- 501 1 2.07 62932.7 0.8100000023841858 5448 3896 9344 DOHH2_400M_050219_2,9346 DOHH2_400M_050219_2,9346,MEKSFSDLF True True MEKSFSDLF 54.597887 552.257495105267 651183.4375 9344.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENST00000404054.3_1_4:1742398-1742845:+|nuORF;;ENST00000470808.1_1_4:1741140-1742845:+|nuORF 2.909744143486023 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9347 54.612 800.0 123770.0 25 0 10843.0 -1 0 80 1092.5254207158114 2183.036288498423 2 1093.027636706829 MULTI CID FTMS 0 0 0 9344 96357.84375 0.5883784863195773 3 -0.0861091613769531 3 2 {[HG]|PP}YPPPPP 8 -1 43.136 0.0 0.0 1.976 0.0 0.0 0.0 1337.5815983386226 1337.5815983386226 19.95613037846248 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[HG]|PP}YPPPPP 1.976 - 1697 1 2.07 67051.3 0.8700000047683716 5449 3896 9344 DOHH2_400M_050219_2,9347 DOHH2_400M_050219_2,9347, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9350 54.634 800.0 19188.0 25 0 919.1 -1 0 42 1148.322192370892 0 1148.322192370892 PEAK CID FTMS 0 0 0 -1 0 1 2 K 1 -1 4.6041 0.0 0.0 0.20065 0.0 0.0 1291.139488646278 872.3514498346311 2163.490938480909 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.20065 - 4 + 1 2.07 19800.4 0.7699999809265137 5450 3898 9349 DOHH2_400M_050219_2,9350 DOHH2_400M_050219_2,9350, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9351 54.64 334.0 25448.0 25 0 3840.3 -1 0 20 1072.5861335795985 0 1072.918749988079 PEAK CID FTMS 0 0 0 9349 34094.60546875 1.0 0 0.0 2 2 C 1 -1 5.4846 0.0 0.0 0.25591 0.0 0.0 1071.5662065281228 965.5792940729124 2037.145500601035 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.25591 - 1 + 1 2.07 15994.8 1.0 5451 3898 9349 DOHH2_400M_050219_2,9351 DOHH2_400M_050219_2,9351, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9352 54.654 800.0 21626.0 25 0 850.35 -1 0 46 1177.3972860753156 0 1177.037280261517 PEAK CID FTMS 0 0 0 -1 0 3 2 H 1 -1 4.6041 0.0 0.0 0.19569 0.0 0.0 1061.1654695121565 1151.5586641901002 2212.7241337022565 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.19569 - 4 + 1 2.07 21337.9 0.7300000190734863 5452 3898 9349 DOHH2_400M_050219_2,9352 DOHH2_400M_050219_2,9352, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9354 54.659 94.0 462150.0 25 0 58375.0 + 45404 YTAVVPLVY 9 70 512.789371527132 1023.564190121064 2 512.7894164919853 MULTI CID FTMS 0 0 0 9353 452718.9375 0.5748015850185827 1 -0.0044975280761718 1 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 70.71552829651908 0.0208223590022201 2 [YT]AVVP 6 3 43.76 0.0 0.0 4.2752 0.0 0.0 0.0 390.2039965998327 390.2039965998327 25.17606240177031 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 1.4361818737241734 0.0 + [YT]AVVP 4.2752 + + 386 1 2.07 42472.1 1.0 5453 3899 9353 DOHH2_400M_050219_2,9354 DOHH2_400M_050219_2,9354,YTAVVPLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9358 54.683 800.0 29844.0 25 0 6018.9 -1 0 37 1080.436450183392 0 1080.436450183392 PEAK CID FTMS 0 0 0 -1 0 1 2 M 1 -1 2.2185 0.0 0.0 0.10276 0.0 0.0 1155.358726927528 869.4598482721311 2024.8185751996589 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.10276 - 1 + 1 2.07 25221.0 0.6800000071525574 5454 3902 9357 DOHH2_400M_050219_2,9358 DOHH2_400M_050219_2,9358, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9361 54.704 800.0 8044.5 25 0 885.78 -1 0 20 997.096649719152 0 996.684130847454 PEAK CID FTMS 0 0 0 9360 13180.2216796875 0.827866300349449 -1 0.0039024353027343 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 15775.0 0.5299999713897705 5455 3904 9360 DOHH2_400M_050219_2,9361 DOHH2_400M_050219_2,9361, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9362 54.718 800.0 19291.0 25 0 800.11 -1 0 47 1134.384448230267 0 1134.384448230267 PEAK CID FTMS 0 0 0 -1 0 2 2 C 1 -1 3.4949 0.0 0.0 0.15418 0.0 0.0 1295.002281615028 865.7028902643186 2160.7051718793464 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.15418 - 2 + 1 2.07 19347.9 0.5299999713897705 5456 3904 9360 DOHH2_400M_050219_2,9362 DOHH2_400M_050219_2,9362, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9364 54.729 505.0 290690.0 25 0 29671.0 + 45537 YTYTLSCVL 9 99 531.762762291516 1061.5109716498318 2 531.7624999880791 MULTI CID FTMS 0 0 0 9363 119392.4609375 0.4149215630567905 11 -0.0873947143554687 1 Unmodified _YTYTLSCVL_ REV__ENSG00000186886|ENST00000641440|OR5D3P 21.74664581756881 0.2544899275067181 2 YT 2 -1 30.718 0.0 0.0 2.8938 0.0 0.0 0.0 794.3779210073044 794.3779210073044 17.954212120639536 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3807196863200844 0.0 YT 2.8938 + + 276 + 1 2.07 114391.5 1.0 5457 3905 9363 DOHH2_400M_050219_2,9364 DOHH2_400M_050219_2,9364,YTYTLSCVL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9368 54.752 738.0 145250.0 25 0 29272.0 -1 0 59 1043.544306524455 2085.074060115709 2 1044.042895495892 MULTI CID FTMS 0 0 0 9367 18917.857421875 0.1057983494748674 14 -0.104705810546875 1 2 [{I|L}P]VY[TA]VV 8 -1 41.999 0.0 0.0 2.0143 0.0 0.0 0.0 1239.5601469525338 1239.5601469525338 33.02001655294582 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.805462187404089 0.0 [{I|L}P]VY[TA]VV 2.0143 - 214 1 2.07 75134.6 1.0 5458 3908 9367 DOHH2_400M_050219_2,9368 DOHH2_400M_050219_2,9368, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9371 54.773 800.0 24784.0 25 0 1557.6 -1 0 41 1165.5352914344166 0 1165.532763659954 PEAK CID FTMS 0 0 0 9370 38595.609375 0.4789653683032306 1 -0.0163993835449218 1 2 H 1 -1 7.7866 0.0 0.0 0.33432 0.0 0.0 1163.5200935116084 1025.4282658362129 2188.948359347821 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 H 0.33432 - 4 + 1 2.07 21018.0 0.4199999868869781 5459 3910 9370 DOHH2_400M_050219_2,9371 DOHH2_400M_050219_2,9371, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9374 54.793 800.0 320080.0 25 0 113410.0 + 45500 YTRFLSEF 8 44 1062.5235564972645 1061.5162800306643 1 1062.523364245892 MULTI CID FTMS 0 0 0 9373 106209.609375 0.2954761396175797 10 -0.0648994445800781 1 Unmodified _YTRFLSEF_ REV__ENSG00000159200|ENST00000313806|RCAN1;REV__nc|ENSG00000159200|P53805-2|RCAN1;REV__nc|ENSG00000159200|P53805-3|RCAN1 4.3292370932331545 0.7980541185046766 2 YTR 3 -1 28.188 0.0 0.0 2.6554 0.0 0.0 0.0 638.2625216119749 638.2625216119749 21.197887582883936 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 YTR 2.6554 + + 9 + 1 2.07 171097.5 0.4399999976158142 5460 3912 9373 DOHH2_400M_050219_2,9374 DOHH2_400M_050219_2,9374,YTRFLSEF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9380 54.826 800.0 51389.0 25 0 2172.1 + -1 STIGQAFEL 9 78 964.9937189507727 1927.9728849683456 2 965.4944335818292 MULTI CID FTMS 0 0 0 9379 88481.0390625 0.871396869685325 -1 0.004058837890625 1 ENSG00000185634|ENST00000332408|SHC4;nc|ENSG00000160691|P29353-5|SHC1;nc|ENSG00000160691|P29353|SHC1;nc|ENSG00000160691|P29353-2|SHC1;nc|ENSG00000160691|P29353-7|SHC1;nc|ENSG00000160691|P29353-3|SHC1;ENSG00000160691|ENST00000448116|SHC1;nc|ENSG00000185634|Q6S5L8-2|SHC4 2 [NP]TRA{M(Oxidation (M))|F}{M(Oxidation (M))|F} 7 -1 33.329 0.0 0.0 1.7287 0.0 0.0 0.0 1091.5584922283645 1091.5584922283645 10.743471363022644 0.0 0.0 0.0 0 0.0 0.0 1.3807196863200843 0.9634679910804403 [NP]TRA{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.7287 - 2208 1 2.07 37474.9 0.3799999952316284 5461 3917 9379 DOHH2_400M_050219_2,9380 DOHH2_400M_050219_2,9380, False False STIGQAFEL 54.825653 965.494433581829 783441.9375 9379.0 ENSG00000185634|ENST00000332408|SHC4;;nc|ENSG00000160691|P29353-5|SHC1;;nc|ENSG00000160691|P29353|SHC1;;nc|ENSG00000160691|P29353-2|SHC1;;nc|ENSG00000160691|P29353-7|SHC1;;nc|ENSG00000160691|P29353-3|SHC1;;ENSG00000160691|ENST00000448116|SHC1;;nc|ENSG00000185634|Q6S5L8-2|SHC4 4.938543081283569 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9387 54.862 800.0 105450.0 25 0 9382.6 -1 0 83 1092.5254207158114 2183.036288498423 2 1093.028247058392 MULTI CID FTMS 0 0 0 9386 57356.140625 0.3502270068394957 30 -0.2597389221191406 1 2 {[HG]|PP}YPPPPP 8 -1 48.136 0.0 0.0 2.205 0.0 0.0 0.0 1337.583123094542 1337.583123094542 25.013487579716767 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {[HG]|PP}YPPPPP 2.205 - 1640 1 2.07 58598.8 0.3700000047683716 5462 3923 9386 DOHH2_400M_050219_2,9387 DOHH2_400M_050219_2,9387, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9393 54.893 717.0 230730.0 25 0 12847.0 + 35193 SSDGAISLLTY 11 90 1126.561621117297 1125.5543446506967 1 1126.559252917767 MULTI CID FTMS 0 0 0 9392 172604.40625 0.705146774905908 -12 0.0728912353515625 1 Unmodified _SSDGAISLLTY_ ENSG00000157020|ENST00000350697|SEC13;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;ENST00000482647.5_1_3:10353516-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 75.76082778847304 0.0157096510099958 2 {[QD]|[EN]|[WG]|[KD]|[RS]}SS{I|L}S{I|L}{I|L}TY 10 4 + 87.785 0.0 0.0 7.7992 7.7992 85.693 0.0 0.0 0.0 5.764837301042718 27.104093769761874 5.764837301042718 3.873657690592452 0 0.9604093769761876 0.0 3.004432191740108 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}SS{I|L}S{I|L}{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}SS{I|L}{I|L}S{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L}SS{I|L}{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}SSS{I|L}{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}SS{I|L}S{I|L}T{I|L}Y;[Q{I|L}]DSSS{I|L}{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}SS{I|L}TV{I|L}TY;[Q{I|L}]SDSS{I|L}{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}SS{I|L}{I|L}{I|L}STY;{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L}S{I|L}S{I|L}TY 7.7992;7.4551;6.9424;6.8681;6.8478;6.7117;6.6972;6.6007;6.5983;6.5983 -;-;-;-;-;-;-;-;-;- 3934 1 2.07 106236.2 1.0 5463 3928 9392 DOHH2_400M_050219_2,9393 DOHH2_400M_050219_2,9393,SSDGAISLLTY True True SSDGAISLLTY 54.893098 1126.55925291777 1990885.375 9392.0 ENSG00000157020|ENST00000350697|SEC13;;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;;nc|ENSG00000157020|P55735-2|SEC13;;nc|ENSG00000157020|P55735-3|SEC13;;nc|ENSG00000157020|P55735-4|SEC13;;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;;ENST00000482647.5_1_3:10353516-10354476:-|nuORF 6.59542195002238 1.0 True 11.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9396 54.914 800.0 110340.0 25 0 8811.9 + 42983 VVTVFQYY 8 87 1018.5249429596188 1017.5176664930189 1 1018.524279773235 MULTI CID FTMS 0 0 0 9395 54359.83203125 0.4686504576577737 -5 0.0310859680175781 1 Unmodified _VVTVFQYY_ ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9|RIPOR2 123.09622228370866 0.0011185070902737 2 {[TV]|[{I|L}S]}VV{M(Oxidation (M))|F}QYY 8 2 + 92.376 0.0 0.0 9.0786 9.0786 87.335 0.0 0.0 0.0 4.191293077419758 16.40978057358332 4.191293077419758 4.191293077419758 0 1.548455006504028 1.3979400086720375 2.079689690656103 0.0 {[TV]|[{I|L}S]}VV{M(Oxidation (M))|F}QYY;VVTV{M(Oxidation (M))|F}QYY;{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VQYY;{[TV]|[{I|L}S]}VV{M(Oxidation (M))|F}[AG]YY;VVT{M(Oxidation (M))|F}VQYY;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VVQYY;{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}QVYY;VVTV{M(Oxidation (M))|F}[AG]YY;{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}V[AG]YY;VVT{M(Oxidation (M))|F}QVYY 9.0786;8.6667;8.5275;8.1683;8.1156;7.9301;7.9189;7.7564;7.6172;7.507 -;+;-;-;-;-;-;-;-;- + 1358 1 2.07 66251.9 0.949999988079071 5464 3930 9395 DOHH2_400M_050219_2,9396 DOHH2_400M_050219_2,9396,VVTVFQYY True True VVTVFQYY 54.91356 1018.52427977323 691830.0 9395.0 nc|ENSG00000111913|Q9Y4F9|RIPOR2;;ENSG00000111913|ENST00000643898|RIPOR2 5.784341812133789 1.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9400 54.938 800.0 24437.0 25 0 3829.2 -1 0 41 1077.1687270721477 0 1077.283251941204 PEAK CID FTMS 0 0 0 9399 14387.095703125 0.4125667589008694 2 -0.034332275390625 1 2 R 1 -1 1.5938 0.0 0.0 0.07405 0.0 0.0 1099.10434759957 894.1027926080686 1993.2071402076383 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.07405 - 1 + 1 2.07 21875.4 0.8700000047683716 5465 3933 9399 DOHH2_400M_050219_2,9400 DOHH2_400M_050219_2,9400, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9401 54.952 800.0 25580.0 25 0 2901.3 -1 0 56 1082.919848620892 0 1082.919848620892 PEAK CID FTMS 0 0 0 -1 0 2 2 G 1 -1 6.9897 0.0 0.0 0.32303 0.0 0.0 793.1407703845592 1310.6138399713502 2103.7546103559093 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.32303 - 10 + 1 2.07 21429.7 0.4099999964237213 5466 3933 9399 DOHH2_400M_050219_2,9401 DOHH2_400M_050219_2,9401, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9407 54.984 800.0 68318.0 25 0 6094.4 + 35194 SSDGAISLLTY 11 93 563.7850345727348 1125.5555162122696 2 563.7847778201103 MULTI CID FTMS 0 0 0 9406 76249.5 0.8264121007169256 -2 0.0079498291015625 1 Unmodified _SSDGAISLLTY_ ENSG00000157020|ENST00000350697|SEC13;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;ENST00000479868.6_1_3:10342947-10354476:-|nuORF;ENST00000482647.5_1_3:10353516-10354476:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 49.93300154707207 0.1180010809391383 2 {I|L}S{I|L}SMY 6 7 46.235 0.0 0.0 4.1077 0.0 0.0 413.2170285187133 0.0 413.2170285187133 0.0 21.492435370573588 0.0 0.0 0 0.0 0.0 1.5044321917401078 0.0 {I|L}S{I|L}SMY 4.1077 - 372 + 1 2.07 49904.7 0.3199999928474426 5467 3938 9406 DOHH2_400M_050219_2,9407 DOHH2_400M_050219_2,9407,SSDGAISLLTY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9410 55.0 482.0 155470.0 25 0 8127.5 + 35290 SSMEGVTFL 9 82 970.4549515101032 969.4476750435032 1 970.4579955935478 MULTI CID FTMS 0 0 0 9409 162036.390625 0.5367363408040314 -9 0.0749282836914062 1 Unmodified _SSMEGVTFL_ ENSG00000102699|ENST00000381989|PARP4 61.357469665136826 0.0253304979873734 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSGVT{M(Oxidation (M))|F}{I|L} 9 4 + 62.077 0.0 0.0 6.4034 6.4034 84.642 0.0 0.0 0.0 1.9627248839266545 28.76181694148492 1.9627248839266545 6.233749886890386 0 1.1643943297944483 0.0 2.138210492164445 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSGVT{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GMSST{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{[CA]|SS}VT{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MDST{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GVSST{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}GMDST{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KDST{M(Oxidation (M))|F}{I|L};[QP]YDST{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSKE{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GMQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 6.4034;5.7603;5.5951;5.5005;5.4315;5.3661;4.9739;4.8231;4.4346;4.0493 -;-;-;-;-;-;-;-;-;- 1108 1 2.07 56756.1 1.0 5468 3940 9409 DOHH2_400M_050219_2,9410 DOHH2_400M_050219_2,9410,SSMEGVTFL True True SSMEGVTFL 54.999599 970.457995593548 1922564.375 9409.0 ENSG00000102699|ENST00000381989|PARP4 2.429029703140259 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9413 55.02 800.0 44072.0 25 0 2606.5 -1 0 64 1086.8600956298758 3257.558457489828 3 1087.524829089642 MULTI CID FTMS 0 0 0 9412 56238.58203125 0.470077722888689 -19 0.1580581665039062 1 2 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[QD]|[EN]|[WG]|[KD]|[RS]}R{M(Oxidation (M))|F} 8 -1 12.681 0.0 0.0 0.38928 0.0 0.0 0.0 2186.0862644568774 2186.0862644568774 3.217196696094435 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.8807196863200843 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[QD]|[EN]|[WG]|[KD]|[RS]}R{M(Oxidation (M))|F} 0.38928 - 29 1 2.07 30312.5 0.3700000047683716 5469 3942 9412 DOHH2_400M_050219_2,9413 DOHH2_400M_050219_2,9413, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9417 55.039 445.0 288240.0 25 0 172480.0 43758 YEFSKLIF 8 35 1046.5529219663056 1045.5456454997056 1 1046.554003894329 MULTI CID FTMS 0 0 0 9416 125810.1640625 0.0606849570141747 43 -0.4023361206054687 1 Unmodified _YEFSKLIF_ ENSG00000083223|ENST00000375963|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 4.75600775471527 0.7954636275367004 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.07 93167.5 1.0 5470 3945 9416 DOHH2_400M_050219_2,9417 DOHH2_400M_050219_2,9417,YEFSKLIF False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9418 55.052 800.0 113930.0 25 0 8014.4 + 19350 LEPEELYQTF 10 99 634.8059411206049 1267.5973293080096 2 634.8058959841728 MULTI CID FTMS 0 0 0 9416 91382.5234375 0.9852960711605532 -6 0.0437469482421875 2 Unmodified _LEPEELYQTF_ ENSG00000167658|ENST00000309311|EEF2 56.17704186161178 0.0466144807663799 2 [EP]E{I|L}YQN 7 4 52.449 0.0 0.0 4.1377 0.0 0.0 0.0 391.1657246539659 391.1657246539659 22.224006323612315 0.0 0.0 0.0 0 0.2742275032520141 1.2218487496163564 1.2038271422956004 0.0 [EP]E{I|L}YQN 4.1377 - 1281 1 2.07 75211.3 0.3400000035762787 5471 3945 9416 DOHH2_400M_050219_2,9418 DOHH2_400M_050219_2,9418,LEPEELYQTF True True LEPEELYQTF 55.052499 634.805895984173 725006.25 9416.0 ENSG00000167658|ENST00000309311|EEF2 5.944002469380696 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9422 55.077 800.0 176430.0 25 0 22337.0 + -1 ILDEVIMGY 9 96 1052.533356619753 0 1052.539721667767 PEAK CID FTMS 0 0 0 9421 171500.953125 1.0 0 0.0 1 ENSG00000138160|ENST00000260731|KIF11;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 2 GM{I|L}{I|L}{I|L}D 6 -1 48.959 0.0 0.0 2.328 0.0 0.0 1232.6018562065 225.0881746881469 1457.6900308946467 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6307196863200843 0.0 GM{I|L}{I|L}{I|L}D 2.328 - 3153 + 1 2.07 94903.6 0.5199999809265137 5472 3948 9421 DOHH2_400M_050219_2,9422 DOHH2_400M_050219_2,9422, False False ILDEVIMGY 55.07702 1052.53972166777 9689003.0 9421.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 5.173453092575073 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9426 55.101 800.0 130660.0 25 0 13836.0 + 3848 DAKIRIFDL 9 99 545.8163124103975 1089.6180718875949 2 545.8163329958916 MULTI CID FTMS 0 0 0 9425 75350.3125 0.3050604693966927 -10 0.0853652954101562 1 Unmodified _DAKIRIFDL_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000482732.1_1_X:153627802-153628024:+|nuORF;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 77.04852534044906 0.0183742546292268 2 DAK{I|L}{I|L}R{M(Oxidation (M))|F}D{I|L} 9 2 + 104.03 0.0 0.0 9.547 9.547 88.69 0.0 0.0 0.0 73.39139815941842 12.98332479720628 12.98332479720628 5.268024924119672 0 2.6237125054200234 1.6989700043360187 1.110924374808178 0.3807196863200844 DAK{I|L}{I|L}R{M(Oxidation (M))|F}D{I|L};DA{I|L}K{I|L}R{M(Oxidation (M))|F}D{I|L};{[DA]|[EG]}K{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{I|L}DAK{I|L}R{M(Oxidation (M))|F}D{I|L};WK{I|L}{I|L}[VG]{M(Oxidation (M))|F}D{I|L};W{I|L}K{I|L}[VG]{M(Oxidation (M))|F}D{I|L};{I|L}SN{I|L}{I|L}R{M(Oxidation (M))|F}D{I|L};[KA]D{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{[TV]|[{I|L}S]}N{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}AKR{I|L}{M(Oxidation (M))|F}D{I|L} 9.547;9.0636;8.1171;6.9944;6.8195;6.336;6.3021;5.8227;5.7337;5.7272 -;-;+;-;-;-;-;-;-;- + 517 + 1 2.07 83810.9 0.800000011920929 5473 3951 9425 DOHH2_400M_050219_2,9426 DOHH2_400M_050219_2,9426,DAKIRIFDL True True DAKIRIFDL 55.101338 545.816332995892 2576500.25 9425.0 ENST00000489200.5_1_X:153627802-153628283:+|nuORF;;ENSG00000165496|ENST00000298283|RPL10L;;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;;ENSG00000147403|ENST00000369817|RPL10;;ENST00000482732.1_1_X:153627802-153628024:+|nuORF;;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 5.186178525288899 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9429 55.112 124.0 568110.0 25 0 59659.0 + 45402 YTAVVPLVY 9 59 1024.5711040509198 1023.5638275843196 1 1026.577075183392 MULTI CID FTMS 0 0 0 9428 581198.625 0.053907188241898 57 -0.5484466552734375 1 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 44.40701690623563 0.0526327925666318 2 [{I|L}P]AAHRVV 8 7 34.02 0.0 0.0 3.3237 0.0 0.0 0.0 177.0487878716822 177.0487878716822 15.20303756120384 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 1.0994850021680094 [{I|L}P]AAHRVV 3.3237 - 289 1 2.07 52053.5 1.0 5474 3953 9428 DOHH2_400M_050219_2,9429 DOHH2_400M_050219_2,9429,YTAVVPLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9430 55.126 800.0 143530.0 25 0 9415.9 + -1 YGGLIFNSY 9 103 1033.498607565966 0 1033.497851550579 PEAK CID FTMS 0 0 0 9428 81697.5703125 0.4119830449058957 -11 0.1016807556152343 2 ENSG00000198712|ENST00000361739|MT-CO2 2 SN{M(Oxidation (M))|F}{I|L}{I|L} 5 -1 24.909 0.0 0.0 1.2063 0.0 0.0 1213.5658490596463 274.08396326236567 1487.649812322012 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.9247425010840048 SN{M(Oxidation (M))|F}{I|L}{I|L} 1.2063 - 1208 + 1 2.07 79080.1 0.5199999809265137 5475 3953 9428 DOHH2_400M_050219_2,9430 DOHH2_400M_050219_2,9430, False False YGGLIFNSY 55.125678 1033.49785155058 1141960.0 9428.0 ENSG00000198712|ENST00000361739|MT-CO2 3.648430347442627 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9431 55.135 515.0 111350.0 25 0 9113.9 -1 0 70 1092.525505407681 2183.0364578821623 2 1093.022998034954 MULTI CID FTMS 0 0 0 9428 92623.4375 0.7873908021426742 -1 0.0040016174316406 3 2 {M(Oxidation (M))|F}PPPPP 6 -1 33.761 0.0 0.0 1.5465 0.0 0.0 1193.5516689190747 354.14219080142817 1547.6938597205028 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}PPPPP 1.5465 - 197 + 1 2.07 46865.3 1.0 5476 3953 9428 DOHH2_400M_050219_2,9431 DOHH2_400M_050219_2,9431, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9435 55.159 800.0 35194.0 25 0 3755.4 -1 0 63 1085.6603476908658 0 1085.703906238079 PEAK CID FTMS 0 0 0 -1 0 1 2 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.21224 0.0 0.0 1415.014651825288 604.2013033502561 2019.215955175544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.21224 - 16 + 1 2.07 26829.8 0.4900000095367431 5477 3956 9434 DOHH2_400M_050219_2,9435 DOHH2_400M_050219_2,9435, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9439 55.184 800.0 19745.0 25 0 1969.8 -1 0 34 1088.5369814560142 0 1088.533984363079 PEAK CID FTMS 0 0 0 -1 0 1 2 E 1 -1 3.4949 0.0 0.0 0.16068 0.0 0.0 1113.0100458204286 930.01032434635 2043.0203701667783 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16068 - 2 + 1 2.07 20893.7 0.5299999713897705 5478 3959 9438 DOHH2_400M_050219_2,9439 DOHH2_400M_050219_2,9439, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9448 55.228 800.0 112970.0 25 0 16147.0 + -1 MEVILLML 8 66 502.2837084644127 1002.5528639956254 2 502.2837097048759 MULTI CID FTMS 0 0 0 9447 98380.796875 0.4542333154300732 -16 0.1266708374023437 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MEVILLML_ REV__ENST00000418596.7_1_2:201838679-201838826:-|nuORF 18.13498045792455 0.6430038125133779 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NG]V{I|L}{I|L}M{I|L} 9 -1 + 62.91 0.0 0.0 6.275 6.275 92.729 0.0 0.0 0.0 16.14393726401687 51.9408341705779 16.14393726401687 25.68636235841012 0 0.8807196863200843 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NG]V{I|L}{I|L}M{I|L};[{I|L}T]{[WN]|[YH]}{I|L}{I|L}M{I|L} 6.275;3.7129 -;- 45 1 2.07 74340.0 0.4600000083446502 5479 3967 9447 DOHH2_400M_050219_2,9448 DOHH2_400M_050219_2,9448,MEVILLML False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9452 55.252 800.0 60402.0 25 0 1325.6 -1 0 93 1159.2104110959306 0 1159.538623034954 PEAK CID FTMS 0 0 0 -1 0 1 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.30175 0.0 0.0 1076.8832692243209 1089.4217012994752 2166.3049705237963 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.30175 - 7 + 1 2.07 33325.2 0.5299999713897705 5480 3970 9451 DOHH2_400M_050219_2,9452 DOHH2_400M_050219_2,9452, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9453 55.26 437.0 58382.0 25 0 3605.2 -1 0 71 924.3343994021416 0 924.3343994021416 PEAK CID FTMS 0 0 0 -1 0 2 2 H 1 -1 3.0989 0.0 0.0 0.16781 0.0 0.0 856.8270496814331 849.7353609674436 1706.5624106488767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.16781 - 4 + 1 2.07 25033.7 1.0 5481 3970 9451 DOHH2_400M_050219_2,9453 DOHH2_400M_050219_2,9453, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9459 55.283 197.0 240600.0 25 0 147200.0 14146 ICAQVIPFL 9 18 1003.5604913915352 1002.5532149249352 1 1003.562060534954 MULTI CID FTMS 0 0 0 9458 99534.609375 0.5666736171539924 -10 0.0723953247070312 1 Unmodified _ICAQVIPFL_ ENSG00000106829|ENST00000376552|TLE4;ENSG00000196781|ENST00000376499|TLE1;ENST00000485159.5_1_9:82188246-82242462:+|nuORF;nc|ENSG00000106829|Q04727-2|TLE4;nc|ENSG00000106829|Q04727-3|TLE4;nc|ENSG00000106829|Q04727-4|TLE4 3.944395688203298 0.7769873103969335 2 V 1 8 5.4846 0.0 0.0 0.54706 0.0 0.0 488.3013971532538 412.1590975397094 900.4604946929633 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.54706 + + 2 + 1 2.07 41335.0 1.0 5482 3975 9458 DOHH2_400M_050219_2,9459 DOHH2_400M_050219_2,9459,ICAQVIPFL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9460 55.289 378.0 150060.0 25 0 45464.0 + 5310 DLDLSPLEY 9 46 1064.5141675576808 1063.506891091081 1 1064.512499988079 MULTI CID FTMS 0 0 0 9458 120598.734375 0.6834155588112425 12 -0.1502609252929687 2 Unmodified _DLDLSPLEY_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 92.4914307365334 0.0139747738690111 2 {NN|[MP]|[D{I|L}]|[EV]}D{I|L}SP{I|L}EY 9 0 + 76.239 0.0 0.0 7.1686 7.1686 83.734 0.0 0.0 0.0 7.147642715192504 53.263196177193066 7.147642715192504 3.26606256887672 0 1.6861818737241734 0.0 1.555462187404089 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}D{I|L}SP{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}DS{I|L}P{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}D{I|L}SPE{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[DN]SP{I|L}EY;{NN|[MP]|[D{I|L}]|[EV]}DS{I|L}PE{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}DP{I|L}EY;[QA]EKSP{I|L}EY;{[QV]|[N{I|L}]|[RA]|[KV]}[NS]DP{I|L}EY;{[QV]|[N{I|L}]|[RA]|[KV]}[DN]SPE{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}D{I|L}[TP]VEY 7.1686;6.8615;5.9626;5.6886;5.6555;5.1555;4.9875;4.7069;4.4826;4.2674 +;-;-;-;-;-;-;-;-;- + 319 1 2.07 44259.5 1.0 5483 3975 9458 DOHH2_400M_050219_2,9460 DOHH2_400M_050219_2,9460,DLDLSPLEY True True DLDLSPLEY 55.289416 1064.51249998808 934995.375 9458.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2 6.246520519256592 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9464 55.305 282.0 61635.0 25 0 2651.2 -1 0 46 1177.997851550579 0 1177.997851550579 PEAK CID FTMS 0 0 0 -1 0 1 2 T 1 -1 2.4743 0.0 0.0 0.10511 0.0 0.0 1714.2548450915897 535.6549166315061 2249.9097617230955 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.10511 - 7 + 1 2.07 21598.4 1.0 5484 3978 9463 DOHH2_400M_050219_2,9464 DOHH2_400M_050219_2,9464, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9468 55.329 800.0 32056.0 25 0 1827.0 -1 0 73 1105.2327769076223 0 1105.295092761517 PEAK CID FTMS 0 0 0 9467 10042.904296875 0.4457413483840342 -1 0.0040130615234375 1 2 {I|L} 1 -1 0.3786 0.0 0.0 0.017143 0.0 0.0 1308.021570805676 784.3186129205686 2092.3401837262445 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.017143 - 5 + 1 2.07 26312.7 0.6200000047683716 5485 3981 9467 DOHH2_400M_050219_2,9468 DOHH2_400M_050219_2,9468, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9469 55.341 655.0 56114.0 25 0 3808.6 -1 0 85 978.5378310426285 0 978.6517211794852 PEAK CID FTMS 0 0 0 9467 13682.806640625 0.6205431437818992 -1 0.0040130615234375 2 2 {M(Oxidation (M))|F}{I|L}A 3 -1 11.427 0.0 0.0 0.58447 0.0 0.0 1253.7257952866255 367.1256502740844 1620.85144556071 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}A 0.58447 - 54 + 1 2.07 31220.6 1.0 5486 3981 9467 DOHH2_400M_050219_2,9469 DOHH2_400M_050219_2,9469, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9472 55.361 785.0 123660.0 25 0 11865.0 + 3849 DAKIRIFDL 9 92 545.8163124103975 1089.6180718875949 2 545.8162719607353 MULTI CID FTMS 0 0 0 9471 90082.21875 0.3647035164740763 22 -0.2784423828125 1 Unmodified _DAKIRIFDL_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000482732.1_1_X:153627802-153628024:+|nuORF;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 79.42699986076722 0.0176555798755335 2 {[DA]|[EG]}K{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L} 9 0 + 83.114 0.0 0.0 7.6278 7.6278 95.596 0.0 0.0 0.0 17.319845938712035 29.71726222832956 17.319845938712035 21.110469015915783 0 2.305462187404089 1.6989700043360187 0.6237125054200234 0.0 + + {[DA]|[EG]}K{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}R{I|L}KAD{I|L};[KA]D{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{[TV]|[{I|L}S]}N{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}AKR{I|L}{M(Oxidation (M))|F}D{I|L};{[SA]|[TG]}[VG]{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}R{I|L}KW{I|L};{[TV]|[{I|L}S]}GG{I|L}R{I|L}{M(Oxidation (M))|F}D{I|L};{[{M(Oxidation (M))|F}D]|MM}{I|L}R{I|L}KAD{I|L};{[DA]|[EG]}K{I|L}{I|L}K{M(Oxidation (M))|F}A{[QG]|[NA]} 7.6278;5.6904;5.5447;5.4558;5.341;4.9679;4.637;4.6107;4.3958;4.2557 +;-;-;-;-;-;-;-;-;- + 536 1 2.07 76914.0 1.0 5487 3983 9471 DOHH2_400M_050219_2,9472 DOHH2_400M_050219_2,9472,DAKIRIFDL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9475 55.381 800.0 33840.0 25 0 3859.0 -1 0 63 1107.857153089897 0 1107.731372058392 PEAK CID FTMS 0 0 0 -1 0 1 2 N 1 -1 3.4949 0.0 0.0 0.15787 0.0 0.0 1372.6529525647572 723.9849337213499 2096.637886286107 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.15787 - 5 + 1 2.07 27003.2 0.4900000095367431 5488 3985 9474 DOHH2_400M_050219_2,9475 DOHH2_400M_050219_2,9475, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9476 55.391 559.0 23294.0 25 0 1628.2 -1 0 28 1101.016894519329 0 1101.016894519329 PEAK CID FTMS 0 0 0 -1 0 2 2 PP 2 -1 7.9588 0.0 0.0 0.36176 0.0 0.0 1551.695640990027 451.1941012018188 2002.8897421918457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.36176 - 13 + 1 2.07 18950.7 1.0 5489 3985 9474 DOHH2_400M_050219_2,9476 DOHH2_400M_050219_2,9476, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9478 55.401 407.0 115360.0 25 0 16354.0 -1 0 74 1092.524511062382 2183.0344691915643 2 1093.025195300579 MULTI CID FTMS 0 0 0 9477 84847.5234375 0.8167786089931297 -8 0.0938911437988281 1 2 [QP][QT]PPPPC 9 -1 39.359 0.0 0.0 1.8029 0.0 0.0 0.0 1234.5908406117394 1234.5908406117394 32.45235939505172 0.0 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 [QP][QT]PPPPC 1.8029 - 216 1 2.07 39115.6 1.0 5490 3986 9477 DOHH2_400M_050219_2,9478 DOHH2_400M_050219_2,9478, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9479 55.413 663.0 184720.0 25 0 12338.0 -1 0 112 1115.5613590717207 0 1115.565234363079 PEAK CID FTMS 0 0 0 9477 113557.734375 0.6860035341802768 -3 0.0464248657226562 2 2 Y{I|L}{I|L}SYSQ 7 -1 52.987 0.0 0.0 2.377 0.0 0.0 1132.5607541768416 239.1041201227172 1371.6648742995587 0.0 0.0 0.0 0.0 0 0.0 0.0 2.1861818737241734 0.7689301784845296 Y{I|L}{I|L}SYSQ 2.377 - 1296 + 1 2.07 79643.0 1.0 5491 3986 9477 DOHH2_400M_050219_2,9479 DOHH2_400M_050219_2,9479, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9480 55.426 800.0 46668.0 25 0 5120.7 -1 0 70 1091.7084488653163 0 1091.561328113079 PEAK CID FTMS 0 0 0 -1 0 3 2 PPPP 4 -1 17.423 0.0 0.0 0.79869 0.0 0.0 1338.9765157952831 451.1946200006469 1790.17113579593 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPP 0.79869 - 57 + 1 2.07 33404.2 0.4300000071525574 5492 3986 9477 DOHH2_400M_050219_2,9480 DOHH2_400M_050219_2,9480, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9483 55.447 800.0 159740.0 25 0 12264.0 + 7104 EEMEWFNNY 9 116 631.2451185838255 1260.475684234451 2 631.2455322146416 MULTI CID FTMS 0 0 0 9482 119582.4609375 0.6485610187521658 -9 0.1254501342773437 1 Unmodified _EEMEWFNNY_ ENSG00000101003|ENST00000262460|GINS1 100.37149154755038 0.0107586824602606 2 EEMEW{M(Oxidation (M))|F}N[YN] 9 0 + 63.668 0.0 0.0 5.0511 5.0511 83.808 0.0 0.0 0.0 11.592055243967934 4.762036441594191 4.762036441594191 9.208187539523747 0 0.6549471895720985 1.3010299956639813 2.3807196863200843 0.0 + + EEMEW{M(Oxidation (M))|F}N[YN];EEMEW{M(Oxidation (M))|F}GG[YN];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EEW{M(Oxidation (M))|F}N[YN];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EEW{M(Oxidation (M))|F}GG[YN];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WEE{M(Oxidation (M))|F}N[YN];EE[TA]NC(Carbamidomethyl (C)){M(Oxidation (M))|F}N[YN];{NN|[MP]|[D{I|L}]|[EV]}SMEE{M(Oxidation (M))|F}N[YN];[WE]MEE{M(Oxidation (M))|F}N[YN];{[ET]|[MV]}[C(Carbamidomethyl (C))Q]W{M(Oxidation (M))|F}N[YN];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WEE{M(Oxidation (M))|F}GG[YN] 5.0511;4.3205;4.1314;3.4009;2.9455;2.7638;2.6365;2.5813;2.4317;2.2149 +;-;-;-;-;-;-;-;-;- + 1203 1 2.07 98042.7 0.4399999976158142 5493 3988 9482 DOHH2_400M_050219_2,9483 DOHH2_400M_050219_2,9483,EEMEWFNNY True True EEMEWFNNY 55.44689 631.245532214642 1117231.875 9482.0 ENSG00000101003|ENST00000262460|GINS1 8.178062280019125 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9488 55.473 661.0 173280.0 25 0 14113.0 + 39039 TVTTVILEV 9 86 974.576743445684 973.5694669790838 1 974.575732409954 MULTI CID FTMS 0 0 0 9487 133934.421875 0.1687487430173976 27 -0.243408203125 1 Unmodified _TVTTVILEV_ ENSG00000119203|ENST00000238112|CPSF3 100.37149154755038 0.0107586824602606 2 {NN|[MP]|[D{I|L}]|[EV]}[VG]V{I|L}{I|L}{M(Oxidation (M))|F}V 9 4 + 73.082 0.0 0.0 7.5066 7.5066 86.484 0.0 0.0 0.0 5.017054463905751 12.4595372608497 5.017054463905751 5.017054463905751 0 0.0 2.0 2.1989700043360187 0.0 {NN|[MP]|[D{I|L}]|[EV]}[VG]V{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}TTV{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[VG]{I|L}V{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}T{I|L}S{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[RV]{I|L}{I|L}{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}[VG]V{I|L}{M(Oxidation (M))|F}{I|L}V;{[TV]|[{I|L}S]}{I|L}TS{I|L}{I|L}EV;{[TV]|[{I|L}S]}T{I|L}{I|L}S{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[VG]{I|L}{I|L}V{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}{I|L}T{I|L}S{I|L}EV 7.5066;6.9913;6.6884;6.6558;6.4049;6.3348;6.3203;6.2956;5.9678;5.9601 -;+;-;-;-;-;-;-;-;- + 3834 1 2.07 83887.1 1.0 5494 3992 9487 DOHH2_400M_050219_2,9488 DOHH2_400M_050219_2,9488,TVTTVILEV True True TVTTVILEV 55.472984 974.575732409954 5366862.0 9487.0 ENSG00000119203|ENST00000238112|CPSF3 4.3568079471588135 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9490 55.489 796.0 113850.0 25 0 17041.0 + 30744 RGSDVIIML 9 64 502.2837084644127 1002.5528639956254 2 502.2840453982353 MULTI CID FTMS 0 0 0 9489 107143.96875 0.4946936973430432 10 -0.1159591674804687 1 Unmodified _RGSDVIIML_ ENSG00000154917|ENST00000285208|RAB6B;ENSG00000175582|ENST00000336083|RAB6A;nc|ENSG00000154917|Q9NRW1-2|RAB6B;nc|ENSG00000175582|P20340-2|RAB6A;nc|ENSG00000175582|P20340-4|RAB6A 20.41453444215458 0.284085796332423 2 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NG]V{I|L}{I|L}M{I|L} 9 4 + 67.157 0.0 0.0 6.6986 6.6986 94.328 0.0 0.0 0.0 20.39136227485692 56.18825918141795 20.39136227485692 30.72559982972642 0 0.8807196863200843 1.6989700043360187 0.0 0.4247425010840047 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NG]V{I|L}{I|L}M{I|L};[{I|L}T]{[WN]|[YH]}{I|L}{I|L}M{I|L} 6.6986;3.6339 -;- 51 1 2.07 72548.9 1.0 5495 3993 9489 DOHH2_400M_050219_2,9490 DOHH2_400M_050219_2,9490,RGSDVIIML False True RGSDVIIML 55.489278 502.284045398235 2588624.25 9489.0 ENSG00000175582|ENST00000336083|RAB6A;;nc|ENSG00000175582|P20340-2|RAB6A;;nc|ENSG00000154917|Q9NRW1-2|RAB6B;;nc|ENSG00000175582|P20340-4|RAB6A;;ENSG00000154917|ENST00000285208|RAB6B 5.333079179128011 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9494 55.514 800.0 29249.0 25 0 802.99 -1 0 64 1167.1505270393154 0 1167.279956042767 PEAK CID FTMS 0 0 0 9493 78233.3515625 1.0 0 0.0 1 2 G 1 -1 6.9897 0.0 0.0 0.29969 0.0 0.0 1022.852615502656 1249.3777559869752 2272.230371489631 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.29969 - 11 + 1 2.07 22362.9 0.3600000143051147 5496 3996 9493 DOHH2_400M_050219_2,9494 DOHH2_400M_050219_2,9494, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9497 55.534 800.0 35286.0 25 0 1662.1 -1 0 70 856.2716552615166 0 856.2716552615166 PEAK CID FTMS 0 0 0 -1 0 1 2 A 1 -1 1.9897 0.0 0.0 0.11632 0.0 0.0 747.8674549548706 888.5989473932249 1636.4664023480957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.11632 - 1 + 1 2.07 27929.9 0.3400000035762787 5497 3998 9496 DOHH2_400M_050219_2,9497 DOHH2_400M_050219_2,9497, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9500 55.555 800.0 101600.0 25 0 18384.0 + 35694 SVFPRAVAL 9 82 480.2874743827418 958.5603958322836 2 480.2878906130791 MULTI CID FTMS 0 0 0 9499 103224.015625 0.1182408978661953 -48 0.4369125366210937 1 Unmodified _SVFPRAVAL_ REV__ENSG00000213903|ENST00000345363|LTB4R 34.10243960390752 0.1078313939113124 2 [VS]{M(Oxidation (M))|F}{I|L} 4 -1 43.5 0.0 0.0 4.538 0.0 0.0 0.0 509.28393573391065 509.28393573391065 29.5205343810445 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 [VS]{M(Oxidation (M))|F}{I|L} 4.538 - 114 + 1 2.07 67586.1 0.7599999904632568 5498 4000 9499 DOHH2_400M_050219_2,9500 DOHH2_400M_050219_2,9500,SVFPRAVAL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9503 55.575 800.0 93884.0 25 0 6311.3 + + 43027 TAMDVVYAL 9 86 982.4895279969486 981.4822515303484 1 982.4872924685478 MULTI CID FTMS 0 0 0 9502 73262.984375 0.4779377258028807 -22 0.2498092651367187 1 Unmodified _VYAAPDAYI_ ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000158406|ENST00000377727|H4C8;ENSG00000275126|ENST00000618305|H4C13;ENSG00000273542|ENST00000611927|H4C12;ENSG00000197061|ENST00000377803|H4C3;ENSG00000276966|ENST00000615164|H4C5;ENSG00000278637|ENST00000617569|H4C1;ENSG00000270882|ENST00000578186|H4C14;ENSG00000197238|ENST00000355057|H4C11;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276180|ENST00000615353|H4C9;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16 81.86404211737425 0.017065112157077 2 [DV]CTVVYA{I|L} 9 -1 + 63.664 0.0 0.0 6.4865 6.4865 77.745 0.0 0.0 0.0 0.3778856088939974 14.973024840566469 0.3778856088939974 0.3778856088939974 0 0.2742275032520141 0.0 2.274227503252014 0.0 [DV]CTVVYA{I|L};[MD]ATVVYA{I|L};VVDCTVYA{I|L};[DV]CTVYVA{I|L};[MD]ATVYVA{I|L};[TA][MD]VVYA{I|L};VVDCTYVA{I|L};[DV]CTVVAY{I|L};[MD]ATVVAY{I|L};[DV]VCTVYA{I|L} 6.4865;6.448;6.2233;6.1058;6.0673;5.9439;5.8425;5.6951;5.6566;5.6483 -;-;-;-;-;-;-;-;-;- 4290 1 2.07 55639.6 0.3899999856948852 5499 4002 9502 DOHH2_400M_050219_2,9503 DOHH2_400M_050219_2,9503,VYAAPDAYI False False TAMDVVYAL 55.575113 982.487292468548 821201.625 9502.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 5.466892639795939 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9504 55.589 800.0 72640.0 25 0 9761.5 + 23797 LVDPWTPHLY 10 73 620.8219254120553 1239.6292978909105 2 620.8216430544853 MULTI CID FTMS 0 0 0 9502 87382.8125 1.0 0 0.0 2 Unmodified _LVDPWTPHLY_ ENSG00000010292|ENST00000315579|NCAPD2 54.773552608820026 0.052133998764723 2 [{I|L}V]DPWTPH{I|L}Y 10 0 + 83.365 0.0 0.0 6.725 6.725 94.692 0.0 0.0 0.0 53.92281585743653 9.119543704721591 9.119543704721591 35.6574271519364 0 0.9247425010840048 2.0 0.7742275032520141 0.0 + + [{I|L}V]DPWTPH{I|L}Y;[{I|L}V]D[QA]{[QG]|[NA]}PH{I|L}Y 6.725;3.8485 +;- + 244 + 1 2.07 50351.8 0.8299999833106995 5500 4002 9502 DOHH2_400M_050219_2,9504 DOHH2_400M_050219_2,9504,LVDPWTPHLY True True LVDPWTPHLY 55.588944 620.821643054485 427691.4375 9502.0 ENSG00000010292|ENST00000315579|NCAPD2 9.00656763712565 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9507 55.609 800.0 78985.0 25 0 15845.0 + 30719 RGGILIEL 8 53 435.7742742427624 869.5339955523248 2 435.7738525271416 MULTI CID FTMS 0 0 0 9506 86412.84375 0.5057549238297925 -14 0.1420669555664062 1 Unmodified _RGGILIEL_ ENSG00000143457|ENST00000271732|GOLPH3L 21.74664581756881 0.5868176546531598 2 {I|L}{I|L}E{I|L} 4 4 36.983 0.0 0.0 4.2531 0.0 0.0 383.228807517775 0.0 383.228807517775 0.0 20.784634594678263 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {I|L}{I|L}E{I|L} 4.2531 + + 29 1 2.07 54672.2 0.8600000143051147 5501 4004 9506 DOHH2_400M_050219_2,9507 DOHH2_400M_050219_2,9507,RGGILIEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9508 55.623 800.0 261310.0 25 0 15132.0 + 1833 ALTPVVVTL 9 108 912.5764895782528 911.5692131116527 1 912.5778076052666 MULTI CID FTMS 0 0 0 9506 157078.25 0.0992410577491083 -44 0.4093551635742187 2 Unmodified _ALTPVVVTL_ ENSG00000135446|ENST00000257904|CDK4;nc|ENSG00000135446|P11802-2|CDK4 125.62461146993168 0.0025947660936329 2 [VP]VVSVVT{I|L} 9 5 + 86.314 0.0 0.0 9.4687 9.4687 86.527 0.0 0.0 0.0 6.816852257142941 14.973024840566469 6.816852257142941 3.3274830476035646 0 0.6549471895720985 1.5228787452803376 1.5941876774005248 0.0 [VP]VVSVVT{I|L};[VP]VVTA{I|L}T{I|L};[VP]VTVA{I|L}T{I|L};[VP]TVVA{I|L}T{I|L};[VP]VVT{I|L}AT{I|L};[{I|L}A]TVPVVT{I|L};[VP]VTA{I|L}VT{I|L};[VP]TVA{I|L}VT{I|L};[VP]VTV{I|L}AT{I|L};[VP]TVV{I|L}AT{I|L} 9.4687;9.1037;8.8671;8.8536;8.7545;8.7209;8.5955;8.582;8.5179;8.5044 -;-;-;-;-;-;-;-;-;- 3477 1 2.07 138943.4 0.5 5502 4004 9506 DOHH2_400M_050219_2,9508 DOHH2_400M_050219_2,9508,ALTPVVVTL True True ALTPVVVTL 55.62321 912.577807605267 12102379.0 9506.0 ENSG00000135446|ENST00000257904|CDK4;;nc|ENSG00000135446|P11802-2|CDK4 6.086716651916504 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9514 55.654 687.0 145500.0 25 0 25305.0 + 5217 DIWKKFEL 8 96 539.8003397223521 1077.586126511504 2 539.8006469607353 MULTI CID FTMS 0 0 0 9513 134047.546875 0.09454656931354 -28 0.3263664245605469 1 Unmodified _DIWKKFEL_ ENSG00000116990|ENST00000372816|MYCL;ENSG00000134323|ENST00000281043|MYCN;ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000116990|P12524-2|MYCL;nc|ENSG00000116990|P12524-3|MYCL;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC;nc|ENSG00000204053|P12525|MYCLP1 63.960520009940105 0.1161527639280749 2 {I|L}D{I|L}{M(Oxidation (M))|F}GK{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L} 9 5 + 84.509 0.0 0.0 7.8424 7.8424 89.051 0.0 0.0 0.0 55.04863339151541 7.2211214065803375 7.2211214065803375 6.817496819840656 0 0.7614393726401688 2.0 1.5356668758921828 0.4247425010840047 {I|L}D{I|L}{M(Oxidation (M))|F}GK{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};D{I|L}{I|L}{M(Oxidation (M))|F}GK{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};{I|L}D{I|L}{M(Oxidation (M))|F}WK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};D{I|L}{I|L}{M(Oxidation (M))|F}WK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}VEGK{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};[WK]K{M(Oxidation (M))|F}EVE{I|L};[WK]K{M(Oxidation (M))|F}E{I|L}D{I|L};{I|L}{M(Oxidation (M))|F}VEWK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[WK]KE{M(Oxidation (M))|F}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}WK{[SA]|[TG]}V{M(Oxidation (M))|F}{I|L} 7.8424;7.2098;7.0089;6.3762;4.7501;4.258;4.0496;3.9165;3.6744;3.5717 -;-;-;-;-;-;-;-;-;- 1023 + 1 2.07 82460.3 1.0 5503 4009 9513 DOHH2_400M_050219_2,9514 DOHH2_400M_050219_2,9514,DIWKKFEL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9523 55.698 800.0 56489.0 25 0 4665.1 + 30597 REVSVPTFSW 10 62 604.309091235701 1206.603629538202 2 604.3088867068291 MULTI CID FTMS 0 0 0 9522 36856.01171875 0.4420363280576165 1 -0.0163688659667968 1 Unmodified _REVSVPTFSW_ ENSG00000134824|ENST00000278840|FADS2;nc|ENSG00000134824|O95864-3|FADS2 33.4449034751529 0.2267874087365337 2 [TP]{M(Oxidation (M))|F}[KP][TP]{M(Oxidation (M))|F}SW 10 5 + 55.803 0.0 0.0 4.6248 4.6248 80.208 0.0 0.0 0.0 11.857378853854676 27.42548830761233 11.857378853854676 8.750612633917001 0 1.424742501084005 0.8860566476931632 1.2059771852360797 0.0 [TP]{M(Oxidation (M))|F}[KP][TP]{M(Oxidation (M))|F}SW;[TP]{M(Oxidation (M))|F}[KP]{[VA]|[{I|L}G]}{M(Oxidation (M))|F}DW;{[WS]|[C(Carbamidomethyl (C)){I|L}]}VVV[TP]{M(Oxidation (M))|F}SW;{[VA]|[{I|L}G]}CVVV[TP]{M(Oxidation (M))|F}SW;{[WS]|[C(Carbamidomethyl (C)){I|L}]}VVV{[VA]|[{I|L}G]}{M(Oxidation (M))|F}DW;[TP]{M(Oxidation (M))|F}[KP][PG]{M(Oxidation (M))|F}M[VS];{[CT]|[{M(Oxidation (M))|F}G]}S{M(Oxidation (M))|F}[TP]{I|L}{I|L}YY;{[VA]|[{I|L}G]}CVVV{[VA]|[{I|L}G]}{M(Oxidation (M))|F}DW;{[WS]|[C(Carbamidomethyl (C)){I|L}]}VVV{[VA]|[{I|L}G]}MMW;[MT]S{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{I|L}{I|L}YY 4.6248;3.8995;3.4749;3.0967;2.7497;2.641;2.5658;2.3715;2.3543;2.3316 -;-;-;-;-;-;-;-;-;- 214 1 2.07 37247.8 0.3199999928474426 5504 4017 9522 DOHH2_400M_050219_2,9523 DOHH2_400M_050219_2,9523,REVSVPTFSW False True REVSVPTFSW 55.698241 604.308886706829 308073.53125 9522.0 ENSG00000134824|ENST00000278840|FADS2;;nc|ENSG00000134824|O95864-3|FADS2 7.1098526318868 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9536 55.759 800.0 159550.0 25 0 54007.0 + -1 DIWKKFEL 8 60 1078.5925370373295 0 1078.588549792767 PEAK CID FTMS 0 0 0 9535 113087.9765625 0.7907482862239765 -18 0.0844841003417968 1 nc|ENSG00000204053|P12525|MYCLP1;nc|ENSG00000136997|P01106-1|MYC;ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000136997|P01106-3|MYC;ENSG00000116990|ENST00000372816|MYCL;ENSG00000134323|ENST00000281043|MYCN;nc|ENSG00000116990|P12524-2|MYCL;nc|ENSG00000116990|P12524-3|MYCL 2 {I|L}E{M(Oxidation (M))|F}KK 5 -1 26.938 0.0 0.0 1.2499 0.0 0.0 1095.5896628424346 411.1687516780954 1506.75841452053 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}E{M(Oxidation (M))|F}KK 1.2499 - 139 + 1 2.07 88447.5 0.7300000190734863 5505 4029 9535 DOHH2_400M_050219_2,9536 DOHH2_400M_050219_2,9536, False False DIWKKFEL 55.758738 1078.58854979277 10196741.375 9535.0 nc|ENSG00000204053|P12525|MYCLP1;;nc|ENSG00000136997|P01106-1|MYC;;ENSG00000136997|ENST00000621592|MYC;;nc|ENSG00000136997|P01106-3|MYC;;ENSG00000116990|ENST00000372816|MYCL;;ENSG00000134323|ENST00000281043|MYCN;;nc|ENSG00000116990|P12524-2|MYCL;;nc|ENSG00000116990|P12524-3|MYCL 6.380849440892537 1.0 False 8.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9545 55.797 305.0 172610.0 25 0 2280.6 -1 0 90 1029.1274333813308 0 1029.385180652142 PEAK CID FTMS 0 0 0 -1 0 1 2 W 1 -1 5.4846 0.0 0.0 0.26673 0.0 0.0 757.6942455694992 1109.4679659479127 1867.162211517412 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.26673 - 13 + 1 2.07 39793.5 1.0 5506 4037 9544 DOHH2_400M_050219_2,9545 DOHH2_400M_050219_2,9545, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9547 55.802 156.0 329270.0 25 0 65809.0 + 36184 SVVRAFAPL 9 51 480.2874743827418 958.5603958322836 2 480.2874023318291 MULTI CID FTMS 0 0 0 9546 380516.09375 0.4358730311460634 -10 0.0588264465332031 1 Unmodified _SVVRAFAPL_ REV__ENSG00000183878|ENST00000545955|UTY;REV__nc|ENSG00000183878|O14607-3|UTY;REV__nc|ENSG00000183878|O14607-4|UTY;REV__nc|ENSG00000183878|O14607-5|UTY;REV__nc|ENSG00000183878|O14607|UTY 25.399314129420983 0.2080152500878129 2 [VS]{M(Oxidation (M))|F}P 4 -1 38.94 0.0 0.0 4.0624 0.0 0.0 0.0 525.3171480768186 525.3171480768186 27.157425997835016 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [VS]{M(Oxidation (M))|F}P 4.0624 - 38 + 1 2.07 46657.0 1.0 5507 4038 9546 DOHH2_400M_050219_2,9547 DOHH2_400M_050219_2,9547,SVVRAFAPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9548 55.816 800.0 39424.0 25 0 4577.9 5219 DIWPPLPQL 9 67 360.20259078726576 1077.5859429619973 3 360.2021362185478 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _DIWPPLPQL_ ENST00000563591.5_1_16:28858025-28877416:+|nuORF 7.910154910731844 0.6385446671287552 2 {NN|[MP]|[D{I|L}]|[EV]}W 3 6 30.458 0.0 0.0 2.8265 0.0 0.0 0.0 660.3718355768186 660.3718355768186 17.98332479720628 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}W 2.8265 + + 13 + 1 2.07 33448.7 0.4799999892711639 5508 4038 9546 DOHH2_400M_050219_2,9548 DOHH2_400M_050219_2,9548,DIWPPLPQL False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9553 55.837 339.0 25952.0 25 0 1305.7 -1 0 29 1186.5455261577542 0 1186.631274402142 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 16577.3 1.0 5509 4042 9552 DOHH2_400M_050219_2,9553 DOHH2_400M_050219_2,9553, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9558 55.866 800.0 193420.0 25 0 32857.0 + 45405 YTAVVPLVY 9 120 1024.5714132410874 1023.5641367744872 1 1024.572436511517 MULTI CID FTMS 0 0 0 9557 157807.890625 0.5466598056150854 -7 0.0330047607421875 1 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 85.35673624503755 0.0162188719545379 2 [{I|L}P]VYTAVVY 9 6 + 81.225 0.0 0.0 7.9355 7.9355 93.52 0.0 0.0 0.0 12.582334120883374 16.478174818886373 12.582334120883374 9.827796776480469 0 0.4247425010840047 1.6989700043360187 1.4916440611282626 0.0 [{I|L}P]VYTAVVY;[{I|L}P]VYTG{I|L}VY;[{I|L}P]V[HS]P{I|L}VY;[YT]AVVP{I|L}VY;{[VA]|[{I|L}G]}TYVP{I|L}VY;[YV]TAVP{I|L}VY;[YT]VAVP{I|L}VY;[YT]AVP{I|L}VVY;{[VA]|[{I|L}G]}TYP{I|L}VVY;[YV]TAP{I|L}VVY 7.9355;6.9754;6.9444;6.7063;6.6284;6.3855;6.3081;6.1132;6.0353;5.7924 -;-;-;+;-;-;-;-;-;- + 1507 1 2.07 102273.7 0.5099999904632568 5510 4046 9557 DOHH2_400M_050219_2,9558 DOHH2_400M_050219_2,9558,YTAVVPLVY True True YTAVVPLVY 55.865657 1024.57243651152 10469194.0 9557.0 ENSG00000132465|ENST00000254801|JCHAIN 7.875290870666504 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9559 55.869 196.0 381430.0 25 0 213330.0 + 23815 LVEKRPFA 8 42 959.5683473155 958.5610708489 1 959.5662719607352 MULTI CID FTMS 0 0 0 9557 202867.421875 0.4496436413324937 -2 0.0080184936523437 2 Unmodified _LVEKRPFA_ REV__ENSG00000110427|ENST00000658780|KIAA1549L;REV__nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;REV__nc|ENSG00000110427|Q6ZVL6|KIAA1549L 7.910154910731844 0.7763180056447161 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 59835.1 1.0 5511 4046 9557 DOHH2_400M_050219_2,9559 DOHH2_400M_050219_2,9559,LVEKRPFA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9562 55.886 593.0 19656.0 25 0 1270.9 -1 0 32 1052.856372058392 0 1052.856372058392 PEAK CID FTMS 0 0 0 -1 0 1 2 {I|L} 1 -1 6.9897 0.0 0.0 0.33226 0.0 0.0 1534.3920521228404 453.2024325006469 1987.5944846234872 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.33226 - 2 + 1 2.07 18754.4 1.0 5512 4048 9561 DOHH2_400M_050219_2,9562 DOHH2_400M_050219_2,9562, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9563 55.893 417.0 19046.0 25 0 1575.3 -1 0 24 1048.495898425579 0 1048.495898425579 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 15416.8 1.0 5513 4048 9561 DOHH2_400M_050219_2,9563 DOHH2_400M_050219_2,9563, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9564 55.896 167.0 14109.0 25 0 2710.2 -1 0 6 1134.4130619617515 0 1134.104052722454 PEAK CID FTMS 0 0 0 -1 0 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 13793.9 1.0 5514 4048 9561 DOHH2_400M_050219_2,9564 DOHH2_400M_050219_2,9564, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9565 55.9 205.0 259630.0 25 0 3253.7 -1 0 103 798.6596557497978 0 798.6596557497978 PEAK CID FTMS 0 0 0 -1 0 4 2 Y 1 -1 2.7642 0.0 0.0 0.17327 0.0 0.0 1221.144920775183 208.0736025445922 1429.2185233197752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.17327 - 4 + 1 2.07 42725.0 1.0 5515 4048 9561 DOHH2_400M_050219_2,9565 DOHH2_400M_050219_2,9565, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9566 55.903 112.0 494000.0 25 0 27436.0 -1 0 108 927.9247314333916 0 927.9247314333916 PEAK CID FTMS 0 0 0 -1 0 5 2 A 1 -1 5.4846 0.0 0.0 0.29585 0.0 0.0 923.7165760486206 856.0420015924436 1779.7585776410642 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.29585 - 19 + 1 2.07 40716.7 1.0 5516 4048 9561 DOHH2_400M_050219_2,9566 DOHH2_400M_050219_2,9566, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9567 55.907 209.0 246960.0 25 0 15744.0 -1 0 120 981.6835204958916 0 981.6835204958916 PEAK CID FTMS 0 0 0 -1 0 6 2 AVS 3 -1 13.174 0.0 0.0 0.67168 0.0 0.0 1274.0109486072142 427.1635836236938 1701.174532230908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 AVS 0.67168 - 69 + 1 2.07 42041.0 1.0 5517 4048 9561 DOHH2_400M_050219_2,9567 DOHH2_400M_050219_2,9567, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9568 55.909 97.0 123340.0 25 0 16483.0 -1 0 36 741.5027953982353 0 741.5027953982353 PEAK CID FTMS 0 0 0 -1 0 7 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.07 15572.2 1.0 5518 4048 9561 DOHH2_400M_050219_2,9568 DOHH2_400M_050219_2,9568, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9569 55.91 54.0 675260.0 25 0 15083.0 -1 0 69 878.1630126833916 0 878.1630126833916 PEAK CID FTMS 0 0 0 -1 0 8 2 Q 1 -1 5.4846 0.0 0.0 0.31263 0.0 0.0 803.1452259509643 820.1047457330686 1623.249971684033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.31263 - 3 + 1 2.07 30416.1 1.0 5519 4048 9561 DOHH2_400M_050219_2,9569 DOHH2_400M_050219_2,9569, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9571 55.916 166.0 344240.0 25 0 53604.0 + 5218 DIWKKFEL 8 72 539.8003397223521 1077.586126511504 2 539.8004638552666 MULTI CID FTMS 0 0 0 9570 371245.0625 0.2618469927442732 12 -0.1434364318847656 1 Unmodified _DIWKKFEL_ ENSG00000116990|ENST00000372816|MYCL;ENSG00000134323|ENST00000281043|MYCN;ENSG00000136997|ENST00000621592|MYC;nc|ENSG00000116990|P12524-2|MYCL;nc|ENSG00000116990|P12524-3|MYCL;nc|ENSG00000136997|P01106-1|MYC;nc|ENSG00000136997|P01106-3|MYC;nc|ENSG00000204053|P12525|MYCLP1 24.020572477871973 0.5389365498350341 2 {I|L}DWK 4 6 55.433 0.0 0.0 5.1442 0.0 0.0 0.0 532.278745196767 532.278745196767 18.521825181113627 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}DWK 5.1442 - 181 + 1 2.07 47154.8 1.0 5520 4049 9570 DOHH2_400M_050219_2,9571 DOHH2_400M_050219_2,9571,DIWKKFEL False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9572 55.93 800.0 13767.0 25 0 1419.4 + -1 CMCKMRRVKNM 11 35 736.8431274294853 0 736.8431274294853 PEAK CID FTMS 0 0 0 -1 0 2 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))MCKM(Oxidation (M))RRVKNM_ REV__ENST00000323274.14_1_18:673204-673267:+|nuORF 0.3070304955306653 0.4761840153648598 2 K 1 -1 6.9897 0.0 0.0 0.47495 0.0 0.0 621.6536488025268 718.8858126275999 1340.5394614301267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.47495 + + 1 + 1 2.07 18813.8 0.8299999833106995 5521 4049 9570 DOHH2_400M_050219_2,9572 DOHH2_400M_050219_2,9572,CMCKMRRVKNM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9575 55.95 800.0 189900.0 25 0 2090.7 -1 0 108 936.3932841243004 0 936.6624633669852 PEAK CID FTMS 0 0 0 -1 0 1 2 D 1 -1 3.6006 0.0 0.0 0.19247 0.0 0.0 1492.6170298191105 260.1031893365844 1752.7202191556946 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 D 0.19247 - 20 + 1 2.07 95346.2 0.7699999809265137 5522 4051 9574 DOHH2_400M_050219_2,9575 DOHH2_400M_050219_2,9575, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9576 55.957 408.0 161080.0 25 0 1723.1 -1 0 128 1015.058459460735 0 1015.058459460735 PEAK CID FTMS 0 0 0 -1 0 2 2 SA 2 -1 6.4537 0.0 0.0 0.31821 0.0 0.0 1715.9599232165883 151.05153833560783 1867.0114615521964 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SA 0.31821 - 27 + 1 2.07 47051.0 1.0 5523 4051 9574 DOHH2_400M_050219_2,9576 DOHH2_400M_050219_2,9576, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9579 55.98 800.0 64101.0 25 0 4796.9 + 38573 TTDDWKDFLY 10 75 652.2958785106432 1302.5772040880863 2 652.7975952029228 MULTI CID FTMS 0 0 0 9578 80025.9609375 0.8113728823225619 -11 0.13262939453125 1 Unmodified _TTDDWKDFLY_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 41.95555342248728 0.1369168616057562 2 {I|L}{M(Oxidation (M))|F}DC{M(Oxidation (M))|F}{I|L}Y 7 6 33.888 0.0 0.0 2.6016 0.0 0.0 383.16964516305546 0.0 383.16964516305546 0.0 22.04873480831203 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}DC{M(Oxidation (M))|F}{I|L}Y 2.6016 - 257 + 1 2.157 45114.2 0.3300000131130218 5524 4053 9578 DOHH2_400M_050219_2,9579 DOHH2_400M_050219_2,9579,TTDDWKDFLY False True TTDDWKDFLY 55.979995 652.2966 798278.5625 9578.0 ENST00000548375.5_1_12:96405582-96408866:-|nuORF;;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;;nc|ENSG00000111144|P09960-4|LTA4H;;nc|ENSG00000111144|P09960-2|LTA4H;;nc|ENSG00000111144|P09960-3|LTA4H;;ENSG00000111144|ENST00000228740|LTA4H 7.465128739674886 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9580 55.988 478.0 28430.0 25 0 1060.0 -1 0 46 1053.984545886517 0 1053.984545886517 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 21300.9 1.0 5525 4053 9578 DOHH2_400M_050219_2,9580 DOHH2_400M_050219_2,9580, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9583 56.009 800.0 138380.0 25 0 16503.0 + 1807 ALSVVLTL 8 108 815.5241889320176 814.5169124654176 1 815.5233642458916 MULTI CID FTMS 0 0 0 9582 57255.48828125 0.5034959315410101 3 -0.0319252014160156 1 Unmodified _ALSVVLTL_ ENST00000355192.7_1_12:65847537-65856998:+|nuORF 101.72198241140316 0.0888720693655427 2 [{I|L}T]GVV{I|L}T{I|L} 8 2 + 77.187 0.0 0.0 9.4764 9.4764 82.019 0.0 0.0 0.0 6.342867450328157 14.90463059526342 6.342867450328157 0.1449798674442206 0 1.0941876774005248 1.2218487496163564 1.7931576817365436 0.0 [{I|L}T]GVV{I|L}T{I|L};[{I|L}T]VGV{I|L}T{I|L};[{I|L}V]TGV{I|L}T{I|L};[{I|L}T]GV{I|L}VT{I|L};[{I|L}T]VG{I|L}VT{I|L};[{I|L}T]GVVT{I|L}{I|L};[{I|L}T]VGVT{I|L}{I|L};[{I|L}T]AA{I|L}{I|L}T{I|L};[{I|L}V]TG{I|L}VT{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V{I|L}T{I|L} 9.4764;9.4586;8.6977;8.4281;8.4103;8.0968;8.079;7.8424;7.6493;7.3579 -;-;-;-;-;-;-;-;-;- 1030 1 2.157 79913.9 0.3400000035762787 5526 4055 9582 DOHH2_400M_050219_2,9583 DOHH2_400M_050219_2,9583,ALSVVLTL True True False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9584 56.016 420.0 304940.0 25 0 14848.0 + 1834 ALTPVVVTL 9 131 912.5764895782528 911.5692131116527 1 912.5740844607352 MULTI CID FTMS 0 0 0 9582 152695.921875 0.0964723301975303 7 -0.0654029846191406 2 Unmodified _ALTPVVVTL_ ENSG00000135446|ENST00000257904|CDK4;nc|ENSG00000135446|P11802-2|CDK4 78.14939416004806 0.0179651292570206 2 [VP]VVSVVT{I|L} 9 5 + 83.981 0.0 0.0 9.2128 9.2128 87.413 0.0 0.0 0.0 19.366130211356065 53.25380025699396 19.366130211356065 4.172516952396435 0 0.6861818737241735 1.2218487496163564 1.6307196863200843 0.0 [VP]VVSVVT{I|L};[VP]VVTA{I|L}T{I|L};[VP]TVVA{I|L}T{I|L};[VP]VVT{I|L}AT{I|L};[VP]VTVA{I|L}T{I|L};[VP]TA{I|L}VVT{I|L};[VP]TVV{I|L}AT{I|L};[VP]VTV{I|L}AT{I|L};[VP]T{I|L}AVVT{I|L};[VP]TVA{I|L}VT{I|L} 9.2128;8.7551;8.4297;8.4276;8.4249;8.1207;8.1023;8.0974;8.0338;7.973 -;-;-;-;-;-;-;-;-;- 2905 1 2.157 88015.1 1.0 5527 4055 9582 DOHH2_400M_050219_2,9584 DOHH2_400M_050219_2,9584,ALTPVVVTL True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9588 56.041 800.0 53553.0 25 0 1121.1 -1 0 90 1136.368212878704 0 1136.368212878704 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 31907.5 0.5899999737739563 5528 4058 9587 DOHH2_400M_050219_2,9588 DOHH2_400M_050219_2,9588, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9591 56.054 351.0 52135.0 25 0 1919.9 -1 0 52 1183.8480722423935 0 1183.734057605267 PEAK CID FTMS 0 0 0 9590 70785.6015625 1.0 0 0.0 1 2 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.16821 0.0 0.0 982.5964607916248 1232.9842012994752 2215.5806620911 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.16821 - 2 + 1 2.157 19768.9 1.0 5529 4060 9590 DOHH2_400M_050219_2,9591 DOHH2_400M_050219_2,9591, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9595 56.072 407.0 50413.0 25 0 1708.2 -1 0 58 1059.5319640821403 0 1059.184008777142 PEAK CID FTMS 0 0 0 -1 0 1 2 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.18797 0.0 0.0 641.6104847054934 1325.3751925104127 1966.985677215906 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.18797 - 3 + 1 2.157 22611.9 1.0 5530 4063 9594 DOHH2_400M_050219_2,9595 DOHH2_400M_050219_2,9595, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9599 56.098 800.0 22660.0 25 0 5121.3 -1 0 42 1191.353320300579 0 1191.353320300579 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 18737.2 0.6899999976158142 5531 4066 9598 DOHH2_400M_050219_2,9599 DOHH2_400M_050219_2,9599, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9600 56.112 800.0 44642.0 25 0 8045.0 + 36185 SVVRAFAPL 9 55 480.2874743827418 958.5603958322836 2 480.2873107790947 MULTI CID FTMS 0 0 0 9598 85992.953125 0.0985030850243639 18 -0.224395751953125 2 Unmodified _SVVRAFAPL_ REV__ENSG00000183878|ENST00000545955|UTY;REV__nc|ENSG00000183878|O14607-3|UTY;REV__nc|ENSG00000183878|O14607-4|UTY;REV__nc|ENSG00000183878|O14607-5|UTY;REV__nc|ENSG00000183878|O14607|UTY 25.399314129420983 0.2080152500878129 2 [VS]{M(Oxidation (M))|F}P 4 -1 37.435 0.0 0.0 3.9053 0.0 0.0 0.0 525.3159884088499 525.3159884088499 25.445312593723983 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [VS]{M(Oxidation (M))|F}P 3.9053 - 20 + 1 2.157 36383.7 0.3199999928474426 5532 4066 9598 DOHH2_400M_050219_2,9600 DOHH2_400M_050219_2,9600,SVVRAFAPL False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9602 56.119 141.0 110040.0 25 0 13338.0 -1 0 40 947.1374999880792 0 947.1374999880792 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 18418.7 1.0 5533 4067 9601 DOHH2_400M_050219_2,9602 DOHH2_400M_050219_2,9602, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9603 56.126 343.0 36209.0 25 0 4687.4 -1 0 35 1050.887499988079 0 1050.887499988079 PEAK CID FTMS 0 0 0 -1 0 2 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.33288 0.0 0.0 766.5139393298708 1183.1485079401002 1949.662447269971 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.33288 - 2 + 1 2.157 16772.7 1.0 5534 4067 9601 DOHH2_400M_050219_2,9603 DOHH2_400M_050219_2,9603, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9604 56.14 800.0 22057.0 25 0 655.21 -1 0 51 1199.059842292594 0 1198.672900378704 PEAK CID FTMS 0 0 0 9601 78642.9375 1.0 0 0.0 3 2 R 1 -1 5.4846 0.0 0.0 0.22889 0.0 0.0 1599.8571590951503 637.1231173150999 2236.98027641025 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.22889 - 4 + 1 2.157 20659.2 0.6399999856948853 5535 4067 9601 DOHH2_400M_050219_2,9604 DOHH2_400M_050219_2,9604, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9607 56.16 800.0 22079.0 25 0 971.75 -1 0 46 1156.9125218602794 0 1156.540332019329 PEAK CID FTMS 0 0 0 -1 0 1 2 E 1 -1 3.9794 0.0 0.0 0.17213 0.0 0.0 978.481829753959 1201.2486055963502 2179.730435350309 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.17213 - 2 + 1 2.157 20814.1 0.4699999988079071 5536 4069 9606 DOHH2_400M_050219_2,9607 DOHH2_400M_050219_2,9607, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9613 56.192 800.0 77094.0 25 0 8240.4 + 6766 EDWIRGVEW 9 89 595.2854763246338 1188.5563997160675 2 595.2852050662041 MULTI CID FTMS 0 0 0 9612 57849.9921875 0.6401059708855823 1 -0.0440711975097656 1 Unmodified _EDWIRGVEW_ ENSG00000134759|ENST00000358232|ELP2;ENST00000536373.5_1_18:33718798-33725056:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2 86.33184430468982 0.0159826143231117 2 [WE]D{I|L}RGVEW 9 2 + 43.36 0.0 0.0 3.6481 3.6481 68.042 0.0 0.0 0.0 0.7217406514756419 3.894615430168997 0.7217406514756419 0.7217406514756419 0 1.274227503252014 0.0 1.8556270500406933 0.0 [WE]D{I|L}RGVEW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W{I|L}RGVEW;[WE]D{I|L}RRE{[DA]|[EG]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W{I|L}RRE{[DA]|[EG]};[VG]{[RE]|[WV]}[W{I|L}]DEW;[VG]{[RE]|[WV]}EEREW;[VG]{[RE]|[WV]}[WE]VEW;[VG]{[RE]|[WV]}[HC]GV{M(Oxidation (M))|F}W;[RK][HT][W{M(Oxidation (M))|F}]EW;[VG]{[RE]|[WV]}[C(Carbamidomethyl (C))H]V{M(Oxidation (M))|F}W 3.6481;3.5874;2.6582;2.5975;1.7257;1.7113;1.6446;1.5105;1.4913;1.3624 -;+;-;-;-;-;-;-;-;- + 238 1 2.157 51797.3 0.7400000095367432 5537 4074 9612 DOHH2_400M_050219_2,9613 DOHH2_400M_050219_2,9613,EDWIRGVEW True True EDWIRGVEW 56.192353 595.285205066204 404175.96875 9612.0 nc|ENSG00000134759|Q6IA86-3|ELP2;;nc|ENSG00000134759|Q6IA86-4|ELP2;;nc|ENSG00000134759|Q6IA86-5|ELP2;;ENST00000536373.5_1_18:33718798-33725056:+|nuORF;;ENSG00000134759|ENST00000358232|ELP2;;nc|ENSG00000134759|Q6IA86-6|ELP2;;nc|ENSG00000134759|Q6IA86-2|ELP2 7.657326380411784 2.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9614 56.206 800.0 140830.0 25 0 5031.2 -1 0 173 1071.738696277142 0 1071.738696277142 PEAK CID FTMS 0 0 0 -1 0 2 2 SA 2 -1 8.5835 0.0 0.0 0.40082 0.0 0.0 1829.319206663856 151.05182825260002 1980.371034916456 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SA 0.40082 - 199 + 1 2.157 70862.2 0.9100000262260436 5538 4074 9612 DOHH2_400M_050219_2,9614 DOHH2_400M_050219_2,9614, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9615 56.22 800.0 64383.0 25 0 7801.2 + 42747 VVEQLKDWLY 10 74 646.8479157186803 1291.6812785041604 2 646.8478881716728 MULTI CID FTMS 0 0 0 9612 84689.53125 1.0 0 0.0 3 Unmodified _VVEQLKDWLY_ ENSG00000164109|ENST00000296509|MAD2L1 49.74193281347159 0.0816655385645911 2 VVEQ{I|L}QC{I|L}VVY 11 5 + 78.937 0.0 0.0 6.1112 6.1112 77.576 0.0 0.0 0.0 16.205065448681914 7.95880017344075 7.95880017344075 0.9691001300805624 0 2.048455006504028 2.0 0.805462187404089 0.0 VVEQ{I|L}QC{I|L}VVY;VVEQ{I|L}S[VG]W{I|L}Y;VVEQ{I|L}QC{I|L}YVV;VVEQ{[SA]|[TG]}W{I|L}VVY;VVE[AG]{I|L}QC{I|L}VVY;VVEQ{I|L}QCVV{I|L}Y;VVE[AG]{I|L}S[VG]W{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VV{I|L}SQEVVY;VVEQ{[SA]|[TG]}W{I|L}YVV;VVE[AG]{I|L}QC{I|L}YVV 6.1112;6.0362;5.4951;5.4372;5.4045;5.3587;5.3295;4.8566;4.821;4.7883 -;-;-;-;-;-;-;-;-;- 2372 1 2.157 43340.2 0.3199999928474426 5539 4074 9612 DOHH2_400M_050219_2,9615 DOHH2_400M_050219_2,9615,VVEQLKDWLY True True VVEQLKDWLY 56.220052 646.847888171673 430306.03125 9612.0 ENSG00000164109|ENST00000296509|MAD2L1 7.238642374674479 2.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9621 56.252 800.0 63358.0 25 0 2119.2 -1 0 104 1118.915412966579 0 1118.882739245892 PEAK CID FTMS 0 0 0 -1 0 1 2 A 1 -1 6.9897 0.0 0.0 0.31262 0.0 0.0 2010.7032644323783 151.0518740289672 2161.7551384613457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.31262 - 3 + 1 2.157 37888.6 0.9300000071525574 5540 4079 9620 DOHH2_400M_050219_2,9621 DOHH2_400M_050219_2,9621, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9622 56.255 151.0 247640.0 25 0 43116.0 + 45406 YTAVVPLVY 9 52 1024.5714132410874 1023.5641367744872 1 1024.573046863079 MULTI CID FTMS 0 0 0 9620 133115.296875 0.4611225840854996 26 -0.3265457153320312 2 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 60.38955033654506 0.025866396858536 2 [{I|L}P]VY[TA]VVY 9 6 + 56.577 0.0 0.0 5.5274 5.5274 77.172 0.0 0.0 0.0 22.31939364284848 26.399699876253777 22.31939364284848 2.4742501084004687 0 0.4247425010840047 1.6989700043360187 0.4247425010840047 0.0 [{I|L}P]VY[TA]VVY;[{I|L}P]V[HS][{I|L}P]VY;[{I|L}P][WH][{I|L}P]VY 5.5274;5.2857;3.8964 -;-;- 102 1 2.157 32866.1 1.0 5541 4079 9620 DOHH2_400M_050219_2,9622 DOHH2_400M_050219_2,9622,YTAVVPLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9623 56.269 800.0 52535.0 25 0 2438.4 -1 0 98 1102.7161200576145 0 1102.750170886517 PEAK CID FTMS 0 0 0 -1 0 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 35427.3 0.8100000023841858 5542 4079 9620 DOHH2_400M_050219_2,9623 DOHH2_400M_050219_2,9623, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9625 56.285 800.0 40238.0 25 0 847.05 -1 0 80 1167.889697253704 0 1167.889697253704 PEAK CID FTMS 0 0 0 -1 0 1 2 {I|L} 1 -1 3.0989 0.0 0.0 0.13279 0.0 0.0 1608.5545887439332 609.1071261041624 2217.6617148480955 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.13279 - 5 + 1 2.157 28354.0 0.3899999856948852 5543 4080 9624 DOHH2_400M_050219_2,9625 DOHH2_400M_050219_2,9625, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9628 56.3 425.0 143720.0 25 0 18730.0 19942 LIDLAIDTY 9 89 1036.5545746234775 1035.5472981568778 1 1036.557666003704 MULTI CID FTMS 0 0 0 9627 69668.4453125 0.5355659931403579 1 -0.0101547241210937 1 Unmodified _LIDLAIDTY_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT 61.357469665136826 0.0253304979873734 2 {I|L}{I|L}D{I|L}A{I|L}DTY 9 0 + 65.213 0.0 0.0 6.2975 6.2975 76.62 0.0 0.0 0.0 0.0443219174010778 16.478174818886373 0.0443219174010778 0.0443219174010778 0 0.6861818737241735 0.0 0.6747425010840047 0.0 + + {I|L}{I|L}D{I|L}A{I|L}DTY;{I|L}{I|L}DA{I|L}{I|L}DTY;[{I|L}A]D{I|L}{I|L}{I|L}DTY;{NN|[MP]|[D{I|L}]|[EV]}A{I|L}{I|L}{I|L}DTY;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}A{I|L}DTY;[{I|L}A]{I|L}D{I|L}{I|L}DTY;{NN|[MP]|[D{I|L}]|[EV]}{I|L}A{I|L}{I|L}DTY;{I|L}{I|L}AD{I|L}{I|L}DTY;{I|L}{I|L}D{I|L}AD{I|L}TY;{I|L}{I|L}DA{I|L}D{I|L}TY 6.2975;6.2932;6.2932;6.2001;6.1274;6.1231;6.1231;5.8324;5.7161;5.7118 +;-;-;-;-;-;-;-;-;- + 854 1 2.157 47468.4 1.0 5544 4082 9627 DOHH2_400M_050219_2,9628 DOHH2_400M_050219_2,9628,LIDLAIDTY True True AILNIIDTY 56.299541 1036.5576660037 0.0 9627.0 ENSG00000085760|ENST00000263629|MTIF2 1.344447374343872 1.0 False 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9631 56.318 677.0 188900.0 25 0 51312.0 + 6742 EDMIPTVGF 9 108 1008.4709473916134 1007.4636709250134 1 1008.469897449017 MULTI CID FTMS 0 0 0 9630 144901.46875 0.777152309028882 -10 0.1275749206542968 1 Unmodified _EDMIPTVGF_ ENSG00000134108|ENST00000256496|ARL8B;ENSG00000143862|ENST00000272217|ARL8A;ENST00000399029.3_1_1:28447646-28447811:-|nuORF;ENST00000444332.1_1_3:5164021-5212295:+|nuORF;ENST00000455168.5_1_3:5164021-5220395:+|nuORF;nc|ENSG00000134108|Q9NVJ2-2|ARL8B 88.90359156742426 0.0153595091083554 2 [TP]VEDM{I|L}G{M(Oxidation (M))|F} 9 6 + 71.322 0.0 0.0 7.0794 7.0794 85.936 0.0 0.0 0.0 5.546378742210663 8.384767769392738 5.546378742210663 5.546378742210663 0 0.6237125054200234 1.3010299956639813 2.524227503252014 0.0 [TP]VEDM{I|L}G{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}PS{I|L}G{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}PTVG{M(Oxidation (M))|F};[TP]VEMD{I|L}G{M(Oxidation (M))|F};[TP]VEMEVG{M(Oxidation (M))|F};[TP]VEDMG{I|L}{M(Oxidation (M))|F};[TP]VG{[QC]|[C(Carbamidomethyl (C))A]}S{I|L}G{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}PSG{I|L}{M(Oxidation (M))|F};[TP]VG{[QC]|[C(Carbamidomethyl (C))A]}TVG{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MP{I|L}S{I|L}G{M(Oxidation (M))|F} 7.0794;6.5289;6.2982;6.283;6.0523;5.6386;5.2457;5.0881;5.015;4.9373 -;-;+;-;-;-;-;-;-;- + 1265 1 2.157 86628.8 1.0 5545 4084 9630 DOHH2_400M_050219_2,9631 DOHH2_400M_050219_2,9631,EDMIPTVGF True True EDMIPTVGF 56.31791 1008.46989744902 1105671.0 9630.0 ENST00000455168.5_1_3:5164021-5220395:+|nuORF;;ENSG00000143862|ENST00000272217|ARL8A;;ENST00000444332.1_1_3:5164021-5212295:+|nuORF;;nc|ENSG00000134108|Q9NVJ2-2|ARL8B;;ENST00000399029.3_1_1:28447646-28447811:-|nuORF;;ENSG00000134108|ENST00000256496|ARL8B 6.24478801091512 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9632 56.329 658.0 230380.0 25 0 4747.4 -1 0 113 1167.8561099501978 0 1167.855883777142 PEAK CID FTMS 0 0 0 9630 63102.98046875 1.0 0 0.0 2 2 R 1 -1 3.9794 0.0 0.0 0.17052 0.0 0.0 1105.4517696056707 1069.1431368463502 2174.594906452021 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.17052 - 12 + 1 2.157 85514.6 1.0 5546 4084 9630 DOHH2_400M_050219_2,9632 DOHH2_400M_050219_2,9632, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9635 56.343 392.0 106550.0 25 0 5878.4 -1 0 92 881.1005150663229 0 880.6983520388603 PEAK CID FTMS 0 0 0 -1 0 1 2 S 1 -1 5.4846 0.0 0.0 0.31159 0.0 0.0 1538.08544678128 132.04580103092033 1670.1312478122004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.31159 - 8 + 1 2.157 33157.6 1.0 5547 4086 9634 DOHH2_400M_050219_2,9635 DOHH2_400M_050219_2,9635, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9642 56.37 244.0 56833.0 25 0 2323.1 -1 0 40 1124.5829423440691 0 1124.581713855267 PEAK CID FTMS 0 0 0 9641 26939.2734375 0.3066837537327929 1 -0.0209922790527343 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 18945.3 1.0 5548 4092 9641 DOHH2_400M_050219_2,9642 DOHH2_400M_050219_2,9642, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9643 56.384 800.0 46753.0 25 0 2512.4 -1 0 94 928.2723612816088 0 928.4540893435478 PEAK CID FTMS 0 0 0 -1 0 2 2 WNS 3 -1 13.188 0.0 0.0 0.7111 0.0 0.0 1332.3229685575552 132.04610620670158 1464.3690747642568 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WNS 0.7111 - 34 + 1 2.157 30954.2 0.4300000071525574 5549 4092 9641 DOHH2_400M_050219_2,9643 DOHH2_400M_050219_2,9643, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9649 56.416 800.0 41499.0 25 0 955.1 -1 0 73 1117.5419504519475 0 1117.415332019329 PEAK CID FTMS 0 0 0 -1 0 1 2 {M(Oxidation (M))|F} 1 -1 2.4743 0.0 0.0 0.1108 0.0 0.0 1184.1234994372955 898.8895357721311 2083.0130352094266 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.1108 - 6 + 1 2.157 28292.8 0.6100000143051147 5550 4097 9648 DOHH2_400M_050219_2,9649 DOHH2_400M_050219_2,9649, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9653 56.44 800.0 148030.0 25 0 8534.5 -1 0 174 927.5441712231266 0 927.4432250857352 PEAK CID FTMS 0 0 0 -1 0 1 2 {M(Oxidation (M))|F}AN{M(Oxidation (M))|F} 4 -1 10.177 0.0 0.0 0.54921 0.0 0.0 549.5164411225857 821.3869112604124 1370.903352382998 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}AN{M(Oxidation (M))|F} 0.54921 - 353 + 1 2.157 79490.3 0.4699999988079071 5551 4100 9652 DOHH2_400M_050219_2,9653 DOHH2_400M_050219_2,9653, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9656 56.456 410.0 18844.0 25 0 1574.3 -1 0 24 996.4737426638604 0 996.4737426638604 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 19122.3 1.0 5552 4102 9655 DOHH2_400M_050219_2,9656 DOHH2_400M_050219_2,9656, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9657 56.462 297.0 236430.0 25 0 35430.0 -1 0 115 1007.905810534954 0 1007.905810534954 PEAK CID FTMS 0 0 0 -1 0 2 2 {I|L}[PS]{I|L}M 5 -1 13.698 0.0 0.0 0.6802 0.0 0.0 1228.4290394275265 241.046686040686 1469.4757254682124 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 {I|L}[PS]{I|L}M 0.6802 - 137 + 1 2.157 53626.6 1.0 5553 4102 9655 DOHH2_400M_050219_2,9657 DOHH2_400M_050219_2,9657, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9658 56.476 800.0 96712.0 25 0 989.45 -1 0 133 1160.273486316204 0 1160.273486316204 PEAK CID FTMS 0 0 0 -1 0 3 2 S 1 -1 6.9897 0.0 0.0 0.30147 0.0 0.0 2006.387749144324 222.08933435611564 2228.47708350044 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.30147 - 26 + 1 2.157 53514.8 0.9800000190734864 5554 4102 9655 DOHH2_400M_050219_2,9658 DOHH2_400M_050219_2,9658, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9659 56.478 79.0 45001.0 25 0 9068.1 -1 0 10 879.4982978039778 0 879.4009277224541 PEAK CID FTMS 0 0 0 9655 60340.39453125 1.0 0 0.0 4 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 14061.7 1.0 5555 4102 9655 DOHH2_400M_050219_2,9659 DOHH2_400M_050219_2,9659, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9660 56.491 800.0 23172.0 25 0 3652.3 -1 0 46 1068.525195300579 0 1068.525195300579 PEAK CID FTMS 0 0 0 -1 0 5 2 M 1 -1 3.0989 0.0 0.0 0.14515 0.0 0.0 1208.9739002673707 791.9921969049436 2000.9660971723144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.14515 - 1 + 1 2.157 22877.7 0.8600000143051147 5556 4102 9655 DOHH2_400M_050219_2,9660 DOHH2_400M_050219_2,9660, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9661 56.502 599.0 20246.0 25 0 1429.0 -1 0 41 727.6783325076103 0 727.6783325076103 PEAK CID FTMS 0 0 0 -1 0 6 2 G 1 -1 2.2185 0.0 0.0 0.15265 0.0 0.0 665.4463123767456 727.8412569635374 1393.287569340283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.15265 - 2 + 1 2.157 23875.1 1.0 5557 4102 9655 DOHH2_400M_050219_2,9661 DOHH2_400M_050219_2,9661, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9662 56.512 551.0 41063.0 25 0 1310.0 + -1 CCMQMWCWSCA 11 70 769.7441894412041 0 769.7441894412041 PEAK CID FTMS 0 0 0 -1 0 7 3 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))M(Oxidation (M))QMWCWSC(Carbamidomethyl (C))A_ REV__ENST00000442692.2_1_11:68822646-68853210:+|nuORF 0.3070304955306653 0.4761840153648598 2 MVT 3 -1 15.903 0.0 0.0 1.0344 0.0 0.0 769.0619739978393 434.2418612115844 1203.3038352094238 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 MVT 1.0344 - 23 + 1 2.157 23795.7 1.0 5558 4102 9655 DOHH2_400M_050219_2,9662 DOHH2_400M_050219_2,9662,CCMQMWCWSCA False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9663 56.525 800.0 164230.0 25 0 23991.0 -1 0 43 631.3989492469086 630.3916727803086 1 631.3988525271416 MULTI CID FTMS 0 0 0 9655 152154.0 0.9351045334227032 -2 0.0198402404785156 8 2 M 1 -1 4.6041 0.0 0.0 0.73035 0.0 0.0 72.04025159589305 424.2868984347416 496.3271500306346 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.73035 - 2 + 1 2.157 98630.9 0.5 5559 4102 9655 DOHH2_400M_050219_2,9663 DOHH2_400M_050219_2,9663, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9664 56.541 800.0 28908.0 25 0 657.36 -1 0 70 765.1351806521416 0 765.1351806521416 PEAK CID FTMS 0 0 0 -1 0 9 2 H 1 -1 5.4846 0.0 0.0 0.35888 0.0 0.0 726.0088123767456 662.1500338190061 1388.1588461957515 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.35888 - 5 + 1 2.157 25494.8 0.5099999904632568 5560 4102 9655 DOHH2_400M_050219_2,9664 DOHH2_400M_050219_2,9664, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9666 56.558 800.0 14243.0 25 0 683.01 + -1 HYFYILYCCES 11 43 749.3116943240166 0 749.3116943240166 PEAK CID FTMS 0 0 0 -1 0 1 Carbamidomethyl (C) _HYFYILYC(Carbamidomethyl (C))CES_ REV__ENST00000469196.1_1_3:156806110-156806296:+|nuORF 0.3506318815782774 0.47618401536486 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 17946.8 0.4000000059604645 5561 4103 9665 DOHH2_400M_050219_2,9666 DOHH2_400M_050219_2,9666,HYFYILYCCES False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9669 56.57 282.0 53359.0 25 0 2346.3 -1 0 40 1160.332080066204 0 1160.332080066204 PEAK CID FTMS 0 0 0 -1 0 1 2 P 1 -1 1.9897 0.0 0.0 0.085813 0.0 0.0 1452.8703846423707 765.7036837213499 2218.5740683637205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.085813 - 1 + 1 2.157 19707.2 1.0 5562 4105 9668 DOHH2_400M_050219_2,9669 DOHH2_400M_050219_2,9669, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9670 56.584 800.0 99985.0 25 0 23087.0 + 45407 YTAVVPLVY 9 53 1024.5714132410874 1023.5641367744872 1 1024.572192370892 MULTI CID FTMS 0 0 0 9668 67950.65625 0.235386788264679 52 -0.5444145202636719 2 Unmodified _YTAVVPLVY_ ENSG00000132465|ENST00000254801|JCHAIN 77.98433622928108 0.0180125044636492 2 TYP{I|L}VY 6 4 58.479 0.0 0.0 5.7133 0.0 0.0 269.175096580275 0.0 269.175096580275 0.0 45.291681396006 0.0 0.0 0 0.9247425010840048 0.0 1.524227503252014 0.0 TYP{I|L}VY 5.7133 - 210 1 2.157 60457.3 0.6299999952316284 5563 4105 9668 DOHH2_400M_050219_2,9670 DOHH2_400M_050219_2,9670,YTAVVPLVY True True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9674 56.6 167.0 151060.0 25 0 4024.7 -1 0 70 1160.150805652142 0 1160.150805652142 PEAK CID FTMS 0 0 0 -1 0 1 2 C(Carbamidomethyl (C)) 1 -1 3.0989 0.0 0.0 0.13367 0.0 0.0 1453.0883411853404 702.1314791315061 2155.2198203168464 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.13367 - 8 + 1 2.157 22538.2 1.0 5564 4108 9673 DOHH2_400M_050219_2,9674 DOHH2_400M_050219_2,9674, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9675 56.603 144.0 86104.0 25 0 8956.1 -1 0 39 988.1847411990166 0 988.1847411990166 PEAK CID FTMS 0 0 0 -1 0 2 2 S 1 -1 5.4846 0.0 0.0 0.27779 0.0 0.0 1752.2543568103392 132.04592310123283 1884.300279911572 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.27779 - 3 + 1 2.157 20785.2 1.0 5565 4108 9673 DOHH2_400M_050219_2,9675 DOHH2_400M_050219_2,9675, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9676 56.607 243.0 26102.0 25 0 2174.1 -1 0 17 1048.367480456829 0 1048.367480456829 PEAK CID FTMS 0 0 0 -1 0 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 16668.9 1.0 5566 4108 9673 DOHH2_400M_050219_2,9676 DOHH2_400M_050219_2,9676, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9677 56.611 180.0 74729.0 25 0 10204.0 -1 0 36 836.2067897867357 0 836.2755615115166 PEAK CID FTMS 0 0 0 -1 0 4 2 K 1 -1 3.9794 0.0 0.0 0.23823 0.0 0.0 875.7444989076527 663.5230806940061 1539.2675796016588 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.23823 - 2 + 1 2.157 18905.3 1.0 5567 4108 9673 DOHH2_400M_050219_2,9677 DOHH2_400M_050219_2,9677, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9678 56.614 186.0 24046.0 25 0 2836.5 -1 0 14 941.7216708271744 0 941.6425659060478 PEAK CID FTMS 0 0 0 -1 0 5 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 13821.4 1.0 5568 4108 9673 DOHH2_400M_050219_2,9678 DOHH2_400M_050219_2,9678, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9679 56.617 142.0 75611.0 25 0 7769.6 + 43474 WVEYYRRWERY 11 30 853.4144164919853 0 853.4144164919853 PEAK CID FTMS 0 0 0 -1 0 6 Unmodified _WVEYYRRWERY_ REV__ENSG00000118017|ENST00000236709|A4GNT 0.0 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 18482.5 1.0 5569 4108 9673 DOHH2_400M_050219_2,9679 DOHH2_400M_050219_2,9679,WVEYYRRWERY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9680 56.62 143.0 44375.0 25 0 3758.3 -1 0 21 1138.411059558392 0 1138.411059558392 PEAK CID FTMS 0 0 0 -1 0 7 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 14907.0 1.0 5570 4108 9673 DOHH2_400M_050219_2,9680 DOHH2_400M_050219_2,9680, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9682 56.638 800.0 148600.0 25 0 8174.7 -1 0 177 917.8767968029534 0 917.5055419802666 PEAK CID FTMS 0 0 0 -1 0 1 2 S 1 -1 7.7423 0.0 0.0 0.42221 0.0 0.0 1611.638208618799 132.0458925836547 1743.6841012024536 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0752574989159953 0.0 S 0.42221 - 80 + 1 2.157 75938.4 0.449999988079071 5571 4109 9681 DOHH2_400M_050219_2,9682 DOHH2_400M_050219_2,9682, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9685 56.658 800.0 102570.0 25 0 7090.2 + -1 YFMFRWFFCRR 11 138 866.4089006236011 0 866.4171630740166 PEAK CID FTMS 0 0 0 9684 30385.775390625 1.0 0 0.0 1 Carbamidomethyl (C),Oxidation (M) _YFM(Oxidation (M))FRWFFC(Carbamidomethyl (C))RR_ REV__ENSG00000001626|ENST00000003084|CFTR;REV__nc|ENSG00000001626|P13569-2|CFTR;REV__nc|ENSG00000001626|P13569-3|CFTR 0.3506318815782774 0.47618401536486 2 QS 2 -1 12.831 0.0 0.0 0.74133 0.0 0.0 1380.6412132571645 132.04616724185783 1512.6873804990223 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 QS 0.74133 - 77 + 1 2.157 55727.0 0.3400000035762787 5572 4111 9684 DOHH2_400M_050219_2,9685 DOHH2_400M_050219_2,9685,YFMFRWFFCRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9686 56.672 800.0 25511.0 25 0 1174.2 -1 0 57 929.2028405917408 0 929.440478503704 PEAK CID FTMS 0 0 0 9684 35433.984375 1.0 0 0.0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 24343.3 0.3499999940395355 5573 4111 9684 DOHH2_400M_050219_2,9686 DOHH2_400M_050219_2,9686, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9687 56.686 800.0 48067.0 25 0 1389.9 -1 0 75 1051.17026759215 0 1051.059863269329 PEAK CID FTMS 0 0 0 -1 0 3 2 {I|L} 1 -1 6.5938 0.0 0.0 0.31394 0.0 0.0 1127.9016180927003 856.2972506158811 1984.198868708581 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {I|L} 0.31394 - 10 + 1 2.157 32355.5 0.3199999928474426 5574 4111 9684 DOHH2_400M_050219_2,9687 DOHH2_400M_050219_2,9687, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9690 56.708 800.0 20181.0 25 0 848.39 -1 0 44 1068.2009775791828 0 1068.292773425579 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 20344.6 0.7699999809265137 5575 4113 9689 DOHH2_400M_050219_2,9690 DOHH2_400M_050219_2,9690, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9693 56.728 800.0 38284.0 25 0 2140.0 -1 0 76 992.8136169184098 0 992.9330322146416 PEAK CID FTMS 0 0 0 -1 0 1 2 K 1 -1 1.5938 0.0 0.0 0.080348 0.0 0.0 1095.4878162569382 757.0079439752561 1852.4957602321945 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.080348 - 4 + 1 2.157 26526.8 0.8799999952316284 5576 4115 9692 DOHH2_400M_050219_2,9693 DOHH2_400M_050219_2,9693, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9694 56.736 446.0 72037.0 25 0 3963.9 -1 0 83 924.0932591114442 0 924.2225219607352 PEAK CID FTMS 0 0 0 -1 0 2 2 A 1 -1 2.7642 0.0 0.0 0.14973 0.0 0.0 1640.0653348959368 132.04610620670158 1772.1114411026383 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.14973 - 2 + 1 2.157 27585.1 1.0 5577 4115 9692 DOHH2_400M_050219_2,9694 DOHH2_400M_050219_2,9694, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9697 56.756 800.0 47977.0 25 0 1305.8 -1 0 90 1148.554626226624 0 1148.599414050579 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.157 33184.6 0.3799999952316284 5578 4117 9696 DOHH2_400M_050219_2,9697 DOHH2_400M_050219_2,9697, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9702 56.785 800.0 77958.0 25 0 6404.0 + 45558 YVDILPYDY 9 103 1160.5557356675556 1159.5484592009557 1 1161.563647449017 MULTI CID FTMS 0 0 0 9701 40355.8203125 0.4033050346911138 1 -0.0164031982421875 1 Unmodified _YVDILPYDY_ ENSG00000081237|ENST00000442510|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC 14.838274106304384 0.4350285940865338 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{M(Oxidation (M))|F} 4 6 30.177 0.0 0.0 2.6025 0.0 0.0 0.0 634.3528164609744 634.3528164609744 12.971062485323516 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{M(Oxidation (M))|F} 2.6025 - 37 1 2.157 45631.7 0.3600000143051147 5579 4121 9701 DOHH2_400M_050219_2,9702 DOHH2_400M_050219_2,9702,YVDILPYDY False True YVDILPYDY 56.784853 1161.56364744902 956191.0 9701.0 ENSG00000081237|ENST00000442510|PTPRC;;nc|ENSG00000081237|P08575-9|PTPRC;;nc|ENSG00000081237|P08575-6|PTPRC;;nc|ENSG00000081237|P08575-4|PTPRC;;nc|ENSG00000081237|P08575-10|PTPRC;;nc|ENSG00000081237|P08575-5|PTPRC;;nc|ENSG00000081237|P08575-7|PTPRC;;nc|ENSG00000081237|P08575-8|PTPRC 6.45970630645752 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9705 56.805 800.0 55405.0 25 0 2466.4 5990 DRKDVVVL 8 91 943.552939364465 942.545662897865 1 943.555712878704 MULTI CID FTMS 0 0 0 9704 28115.57421875 0.2766953270481934 1 -0.016387939453125 1 Unmodified _DRKDVVVL_ ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9 13.90604991867851 0.7054780292895731 2 {[QS]|[NT]}[W{I|L}]VVV{I|L} 8 4 + 40.891 0.0 0.0 4.3383 4.3383 84.816 0.0 0.0 0.0 8.952424927286842 33.187587626244124 8.952424927286842 22.26017550314786 0 0.0 0.0 0.8494850021680094 0.0 {[QS]|[NT]}[W{I|L}]VVV{I|L};[{I|L}P][KA]S{[ES]|[DT]|[{I|L}C]}V{I|L};[QP][C(Carbamidomethyl (C))K][KA]V{I|L};[PG]A[C(Carbamidomethyl (C))K][KA]V{I|L};[QP][C(Carbamidomethyl (C))K]V[KA]{I|L};[PG]A[C(Carbamidomethyl (C))K]V[KA]{I|L} 4.3383;1.9766;1.4477;1.3094;0.94149;0.80321 -;-;-;-;-;- 70 1 2.157 34810.4 0.3400000035762787 5580 4123 9704 DOHH2_400M_050219_2,9705 DOHH2_400M_050219_2,9705,DRKDVVVL False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9710 56.827 382.0 103590.0 25 0 6296.4 6967 EEIFGTIGM 9 55 996.470097097259 995.4628206306588 1 998.4734985232352 MULTI CID FTMS 0 0 0 9709 207954.03125 0.7791585452226707 7 -0.07330322265625 1 Unmodified _EEIFGTIGM_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 21.74664581756881 0.2544899275067181 2 {[WT]|[RM]}{I|L}EP{M(Oxidation (M))|F}G{M(Oxidation (M))|F} 8 6 + 42.6 0.0 0.0 4.2794 4.2794 78.084 0.0 0.0 0.0 3.679767852945943 19.428513514489005 3.679767852945943 7.770475459787669 0 0.0 0.0 0.3494850021680094 0.0 {[WT]|[RM]}{I|L}EP{M(Oxidation (M))|F}G{M(Oxidation (M))|F};EE{I|L}{[SA]|[TG]}P{M(Oxidation (M))|F}G{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}E{[SA]|[TG]}P{M(Oxidation (M))|F}G{M(Oxidation (M))|F};[VP]W{M(Oxidation (M))|F}P{M(Oxidation (M))|F}G{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}P{M(Oxidation (M))|F}G{M(Oxidation (M))|F};EE{I|L}{M(Oxidation (M))|F}N[TP]{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}N[TP]{M(Oxidation (M))|F};{[WT]|[RM]}[RD][KS]G{M(Oxidation (M))|F};EE{I|L}{[SA]|[TG]}E[YR];[HS]{I|L}{[WT]|[RM]}{I|L}[HC] 4.2794;3.4988;3.276;2.7937;2.2985;1.9588;1.7359;1.5449;1.525;1.5153 -;-;-;-;-;-;-;-;-;- 459 1 2.157 33865.5 1.0 5581 4127 9709 DOHH2_400M_050219_2,9710 DOHH2_400M_050219_2,9710,EEIFGTIGM False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9713 56.847 800.0 23894.0 25 0 687.02 -1 0 57 1110.452563464642 0 1110.452563464642 PEAK CID FTMS 0 0 0 -1 0 1 2 M 1 -1 2.4743 0.0 0.0 0.11151 0.0 0.0 964.0417713611216 1120.7810762994752 2084.822847660597 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.11151 - 5 + 1 2.157 21604.2 0.3199999928474426 5582 4129 9712 DOHH2_400M_050219_2,9713 DOHH2_400M_050219_2,9713, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9717 56.873 800.0 109190.0 25 0 1456.6 -1 0 111 1195.2237672755623 0 1195.219409167767 PEAK CID FTMS 0 0 0 9716 36938.4375 0.3777751748244484 1 -0.0316085815429687 1 2 D 1 -1 3.4949 0.0 0.0 0.14632 0.0 0.0 1534.0309563267126 736.3344820611936 2270.365438387906 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.14632 - 31 + 1 2.299 51018.9 0.3100000023841858 5583 4132 9716 DOHH2_400M_050219_2,9717 DOHH2_400M_050219_2,9717, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9718 56.887 800.0 20364.0 25 0 727.47 -1 0 49 1057.950976550579 0 1057.950976550579 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.299 20389.9 0.3400000035762787 5584 4132 9716 DOHH2_400M_050219_2,9718 DOHH2_400M_050219_2,9718, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9722 56.911 800.0 45948.0 25 0 3385.6 -1 0 89 990.8041869997978 0 990.8041869997978 PEAK CID FTMS 0 0 0 -1 0 1 2 R 1 -1 3.9794 0.0 0.0 0.20102 0.0 0.0 1061.955711790808 758.5026339166624 1820.4583457074705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.20102 - 5 + 1 2.299 33604.8 0.4699999988079071 5585 4135 9721 DOHH2_400M_050219_2,9722 DOHH2_400M_050219_2,9722, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9731 56.957 800.0 24203.0 25 0 784.57 -1 0 54 1147.8904347364914 0 1148.186328113079 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.299 24488.0 0.3400000035762787 5586 4143 9730 DOHH2_400M_050219_2,9731 DOHH2_400M_050219_2,9731, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9734 56.977 800.0 151600.0 25 0 66177.0 -1 0 93 1164.531702203829 0 1164.529711902142 PEAK CID FTMS 0 0 0 9733 289004.78125 1.0 0 0.0 1 2 W 1 -1 6.9897 0.0 0.0 0.30037 0.0 0.0 1163.521359315576 974.4245684205453 2137.945927736121 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.30037 - 5 + 1 2.299 79977.5 0.800000011920929 5587 4145 9733 DOHH2_400M_050219_2,9734 DOHH2_400M_050219_2,9734, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9735 56.98 155.0 55323.0 25 0 3297.2 -1 0 24 1087.406665027142 0 1087.406665027142 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.299 15870.6 1.0 5588 4145 9733 DOHH2_400M_050219_2,9735 DOHH2_400M_050219_2,9735, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9736 56.982 83.0 161560.0 25 0 22780.0 -1 0 37 894.6926757693291 0 894.6926757693291 PEAK CID FTMS 0 0 0 -1 0 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.299 19302.6 1.0 5589 4145 9733 DOHH2_400M_050219_2,9736 DOHH2_400M_050219_2,9736, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9737 56.994 682.0 49561.0 25 0 2735.2 -1 0 88 893.3041869997978 0 893.3041869997978 PEAK CID FTMS 0 0 0 -1 0 4 2 M 1 -1 5.4846 0.0 0.0 0.30733 0.0 0.0 1438.45665783573 212.06882654361564 1650.5254843793457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.30733 - 9 + 1 2.299 28867.2 1.0 5590 4145 9733 DOHH2_400M_050219_2,9737 DOHH2_400M_050219_2,9737, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9738 56.996 113.0 51938.0 25 0 4519.5 -1 0 19 1022.03178434799 0 1022.174731433392 PEAK CID FTMS 0 0 0 -1 0 5 2 {I|L} 1 -1 6.9897 0.0 0.0 0.34229 0.0 0.0 1486.719927483286 439.22199426822505 1925.941921751511 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.34229 - 2 + 1 2.299 16967.7 1.0 5591 4145 9733 DOHH2_400M_050219_2,9738 DOHH2_400M_050219_2,9738, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9739 57.0 235.0 36509.0 25 0 2514.0 -1 0 30 992.8961059451104 0 992.8961059451104 PEAK CID FTMS 0 0 0 -1 0 6 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.299 16754.6 1.0 5592 4145 9733 DOHH2_400M_050219_2,9739 DOHH2_400M_050219_2,9739, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9740 57.003 139.0 80790.0 25 0 13235.0 -1 SCRSRWRRPWR 11 32 801.9189941287041 0 801.9189941287041 PEAK CID FTMS 0 0 0 -1 0 7 Carbamidomethyl (C) _SC(Carbamidomethyl (C))RSRWRRPWR_ ENST00000481661.1_1_14:59931594-59931975:-|nuORF 0.0 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.299 14326.4 1.0 5593 4145 9733 DOHH2_400M_050219_2,9740 DOHH2_400M_050219_2,9740,SCRSRWRRPWR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9741 57.007 162.0 83154.0 25 0 3710.0 -1 MWWWRWRIVVC 11 45 868.4210693240166 0 868.4210693240166 PEAK CID FTMS 0 0 0 -1 0 8 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))WWWRWRIVVC(Carbamidomethyl (C))_ ENST00000536283.1_1_12:49350078-49350123:-|nuORF 0.0 0.4761840153648598 2 A 1 -1 3.0989 0.0 0.0 0.17863 0.0 0.0 1454.767265745886 205.9974306695922 1660.7646964154785 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.17863 - 3 + 1 2.299 17473.4 1.0 5594 4145 9733 DOHH2_400M_050219_2,9741 DOHH2_400M_050219_2,9741,MWWWRWRIVVC False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9743 57.023 800.0 16379.0 25 0 2411.3 -1 0 36 736.7077683914956 0 736.4277831912041 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.299 18831.0 0.7400000095367432 5595 4146 9742 DOHH2_400M_050219_2,9743 DOHH2_400M_050219_2,9743, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9748 57.047 552.0 57207.0 25 0 23251.0 -1 0 53 1163.0797015193582 0 1163.484790027142 PEAK CID FTMS 0 0 0 9747 28777.634765625 1.0 0 0.0 1 2 A 1 -1 6.9897 0.0 0.0 0.30074 0.0 0.0 1939.971828720554 310.11786829166255 2250.0896970122167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.30074 - 4 + 1 2.299 32085.0 1.0 5596 4150 9747 DOHH2_400M_050219_2,9748 DOHH2_400M_050219_2,9748, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9752 57.072 800.0 30203.0 25 0 1585.1 -1 0 62 1194.272021472454 0 1194.272021472454 PEAK CID FTMS 0 0 0 -1 0 1 2 T 1 -1 3.9794 0.0 0.0 0.16674 0.0 0.0 1053.2373280017457 1229.2443331354127 2282.4816611371584 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.16674 - 11 + 1 2.299 22435.5 0.3499999940395355 5597 4153 9751 DOHH2_400M_050219_2,9752 DOHH2_400M_050219_2,9752, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9756 57.096 800.0 35508.0 25 0 1126.5 -1 0 61 1081.8628720030435 0 1081.864062488079 PEAK CID FTMS 0 0 0 9755 39757.46875 0.3477144461467044 -8 0.0529098510742187 1 2 NG 2 -1 7.0783 0.0 0.0 0.32744 0.0 0.0 834.0692976176123 1153.5355929010375 1987.6048905186497 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NG 0.32744 - 11 + 1 2.299 28754.0 0.3400000035762787 5598 4156 9755 DOHH2_400M_050219_2,9756 DOHH2_400M_050219_2,9756, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9757 57.107 609.0 54730.0 25 0 1278.8 -1 0 89 1080.118823230267 0 1080.118823230267 PEAK CID FTMS 0 0 0 -1 0 2 2 K 1 -1 3.0989 0.0 0.0 0.14359 0.0 0.0 1472.4327625720591 554.6841524713499 2027.1169150434089 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.14359 - 9 + 1 2.299 27683.5 1.0 5599 4156 9755 DOHH2_400M_050219_2,9757 DOHH2_400M_050219_2,9757, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9760 57.127 800.0 137680.0 25 0 8229.8 + 6968 EEIFGTIGM 9 135 996.470097097259 995.4628206306588 1 996.4631835818292 MULTI CID FTMS 0 0 0 9759 105714.296875 0.0758989434009202 35 -0.3691902160644531 1 Unmodified _EEIFGTIGM_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 100.37149154755038 0.0107586824602606 2 {[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}GT{I|L}{[MG]|[TS]} 9 2 + 60.018 0.0 0.0 6.0292 6.0292 88.612 0.0 0.0 0.0 6.050822399506956 16.452451556415596 6.050822399506956 9.586073148417752 0 1.360924374808178 1.5228787452803376 2.004432191740108 0.0 {[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}GT{I|L}{[MG]|[TS]};EE{I|L}{M(Oxidation (M))|F}GT{I|L}{[MG]|[TS]};[{I|L}T]WE{M(Oxidation (M))|F}{I|L}{[MG]|[TS]};[VP]G{M(Oxidation (M))|F}E{M(Oxidation (M))|F}{I|L}{[MG]|[TS]};{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}[KP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[{I|L}T]WEEG[YV];{[WT]|[RM]}{I|L}E{M(Oxidation (M))|F}{I|L}{[MG]|[TS]};[{I|L}T]WE{I|L}{M(Oxidation (M))|F}{[MG]|[TS]};[{I|L}T]WE{I|L}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[{I|L}T]WET{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 6.0292;5.0662;5.0208;4.0654;4.0254;4.0043;3.9025;3.865;3.8297;3.7625 -;+;-;-;-;-;-;-;-;- + 3236 1 2.299 74969.2 0.7599999904632568 5600 4158 9759 DOHH2_400M_050219_2,9760 DOHH2_400M_050219_2,9760,EEIFGTIGM True True EEIFGTIGM 57.127316 996.463183581829 6973741.0 9759.0 ENSG00000126457|ENST00000454376|PRMT1;;nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENST00000530361.5_1_19:50188842-50191499:+|nuORF;;nc|ENSG00000126457|Q99873-5|PRMT1 6.3691786130269366 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9763 57.148 800.0 42408.0 25 0 5553.0 + -1 AQGTPPPPMQF 11 38 1186.551911512738 1185.544635046138 1 1186.566332995892 MULTI CID FTMS 0 0 0 9762 17696.1171875 0.3736182115503312 -1 0.0040626525878906 1 Oxidation (M) _AQGTPPPPM(Oxidation (M))QF_ REV__ENSG00000124313|ENST00000642864|IQSEC2 13.614867670302877 0.751941774060705 2 PPPP 4 -1 18.928 0.0 0.0 1.5966 0.0 0.0 343.115328334626 451.1953498976052 794.3106782322311 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPP 1.5966 + + 29 + 1 2.299 28946.6 0.3799999952316284 5601 4160 9762 DOHH2_400M_050219_2,9763 DOHH2_400M_050219_2,9763,AQGTPPPPMQF False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9770 57.184 800.0 53799.0 25 0 2054.5 -1 0 61 1081.528474049515 3241.563592748744 3 1081.527758777142 MULTI CID FTMS 0 0 0 -1 0 1 2 VM{[QV]|[N{I|L}]|[RA]|[KV]} 4 -1 16.198 0.0 0.0 0.49969 0.0 0.0 2766.318560397417 0.0 2766.318560397417 0.0 9.208187539523747 0.0 0.0 0 0.0 0.0 0.0 0.0 VM{[QV]|[N{I|L}]|[RA]|[KV]} 0.49969 - 22 1 2.299 37533.8 0.270000010728836 5602 4166 9769 DOHH2_400M_050219_2,9770 DOHH2_400M_050219_2,9770, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9773 57.207 800.0 11709.0 25 0 676.55 -1 0 27 1198.049121081829 0 1198.049121081829 PEAK CID FTMS 0 0 0 -1 0 1 2 W 1 -1 3.9794 0.0 0.0 0.16622 0.0 0.0 1336.2663807361207 868.7194918268186 2204.985872562939 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.16622 - 1 + 1 2.295 17586.4 0.8399999737739563 5603 4168 9772 DOHH2_400M_050219_2,9773 DOHH2_400M_050219_2,9773, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9774 57.213 361.0 23043.0 25 0 4753.5 + 31231 RLRRRARRRRP 11 25 775.0021705781699 1547.9897882231396 2 775.5032226443291 MULTI CID FTMS 0 0 0 9772 129912.21875 1.0 0 0.0 2 Unmodified _RLRRRARRRRP_ REV__ENST00000591365.1_1_17:43298722-43299568:-|nuORF 0.0 0.8751479354844584 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.295 14349.6 1.0 5604 4168 9772 DOHH2_400M_050219_2,9774 DOHH2_400M_050219_2,9774,RLRRRARRRRP False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9777 57.229 485.0 140860.0 25 0 6794.7 -1 0 131 934.5077879795874 0 934.5842162966728 PEAK CID FTMS 0 0 0 9776 16330.6494140625 1.0 0 0.0 1 2 PG 2 -1 6.1979 0.0 0.0 0.33197 0.0 0.0 1421.8029161917934 288.10090051822505 1709.9038167100184 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PG 0.33197 - 45 + 1 2.295 46999.6 1.0 5605 4170 9776 DOHH2_400M_050219_2,9777 DOHH2_400M_050219_2,9777, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9778 57.24 671.0 60969.0 25 0 1254.9 -1 0 88 918.6213011348532 0 918.7781249880792 PEAK CID FTMS 0 0 0 9776 9543.75 0.5943336880069242 -1 0.0039787292480468 2 2 Q 1 -1 3.4949 0.0 0.0 0.19043 0.0 0.0 960.8337144749815 743.3303927057249 1704.1641071807064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.19043 - 3 + 1 2.295 35174.0 1.0 5606 4170 9776 DOHH2_400M_050219_2,9778 DOHH2_400M_050219_2,9778, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9779 57.254 800.0 31336.0 25 0 867.42 -1 0 71 861.7535688046129 0 862.2119018435478 PEAK CID FTMS 0 0 0 -1 0 3 2 S 1 -1 2.4743 0.0 0.0 0.14373 0.0 0.0 1009.279219052782 622.1677950494749 1631.4470141022568 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.14373 - 8 + 1 2.295 23989.3 0.9200000166893004 5607 4170 9776 DOHH2_400M_050219_2,9779 DOHH2_400M_050219_2,9779, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9783 57.278 800.0 31784.0 25 0 1740.2 -1 0 72 962.6290161013604 0 962.6290161013604 PEAK CID FTMS 0 0 0 -1 0 1 2 S 1 -1 6.9897 0.0 0.0 0.36343 0.0 0.0 1701.1428760974486 132.04602991275627 1833.1889060102048 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.36343 - 4 + 1 2.295 28127.0 0.4000000059604645 5608 4173 9782 DOHH2_400M_050219_2,9783 DOHH2_400M_050219_2,9783, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9784 57.292 800.0 171390.0 25 0 14443.0 + 712 AEPDFVVTDF 10 124 1139.5240967531747 1138.5168202865748 1 1139.527880847454 MULTI CID FTMS 0 0 0 9782 90034.0390625 0.6516971536577829 5 -0.0586090087890625 2 Unmodified _AEPDFVVTDF_ ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1 106.94017166704064 0.0046191154308253 2 [DP]{M(Oxidation (M))|F}VEAVTD{M(Oxidation (M))|F} 10 4 + 81.513 0.0 0.0 7.1596 7.1596 81.263 0.0 0.0 0.0 1.411130871959955 15.026975159433531 1.411130871959955 1.411130871959955 0 0.9876954943324544 0.0 1.9520534381044503 0.0 [DP]{M(Oxidation (M))|F}VEAVTD{M(Oxidation (M))|F};{[CP]|[EA]}PD{M(Oxidation (M))|F}VVTD{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}VAEVTD{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}VVEATD{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}AEVVTD{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}VVAETD{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}VEVATD{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}AVEVTD{M(Oxidation (M))|F};[DP]EA{M(Oxidation (M))|F}VVTD{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}VAVETD{M(Oxidation (M))|F} 7.1596;7.0356;7.0045;6.9544;6.8638;6.8537;6.2934;6.246;6.1813;6.0376 -;+;-;-;-;-;-;-;-;- + 4454 1 2.295 85736.1 0.4399999976158142 5609 4173 9782 DOHH2_400M_050219_2,9784 DOHH2_400M_050219_2,9784,AEPDFVVTDF True True AEPDFVVTDF 57.292215 1139.52788084745 1227591.5 9782.0 ENSG00000130985|ENST00000335972|UBA1;;nc|ENSG00000130985|P22314-2|UBA1 8.257051785786947 1.0 True 10.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9787 57.313 800.0 58753.0 25 0 5515.6 -1 0 94 1185.822192370892 0 1185.822192370892 PEAK CID FTMS 0 0 0 -1 0 1 2 PPPP 4 -1 18.928 0.0 0.0 0.79877 0.0 0.0 1527.2003406970591 451.19452844791255 1978.394869144972 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPP 0.79877 - 73 + 1 2.295 36833.4 0.3799999952316284 5610 4175 9786 DOHH2_400M_050219_2,9787 DOHH2_400M_050219_2,9787, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9791 57.337 800.0 26308.0 25 0 6755.7 -1 0 46 1164.115527331829 0 1164.115527331829 PEAK CID FTMS 0 0 0 -1 0 1 2 T 1 -1 2.4743 0.0 0.0 0.10636 0.0 0.0 1394.2931141345582 827.8513277643186 2222.1444418988767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.10636 - 1 + 1 2.295 23430.6 0.550000011920929 5611 4178 9790 DOHH2_400M_050219_2,9791 DOHH2_400M_050219_2,9791, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9794 57.355 684.0 19112.0 25 0 728.31 -1 0 39 1098.039721667767 0 1098.039721667767 PEAK CID FTMS 0 0 0 -1 0 1 2 {I|L} 1 -1 5.4846 0.0 0.0 0.24997 0.0 0.0 1262.8732532947154 815.1070650690061 2077.9803183637214 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.24997 - 2 + 1 2.295 18464.2 1.0 5612 4180 9793 DOHH2_400M_050219_2,9794 DOHH2_400M_050219_2,9794, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9799 57.372 141.0 352110.0 25 0 21458.0 -1 0 110 871.2377248814854 0 871.0904418826103 PEAK CID FTMS 0 0 0 9798 31845.41796875 1.0 0 0.0 1 2 A 1 -1 5.4846 0.0 0.0 0.31512 0.0 0.0 1534.3549073051597 132.04583154849846 1666.400738853658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.31512 - 13 + 1 2.295 37961.1 1.0 5613 4184 9798 DOHH2_400M_050219_2,9799 DOHH2_400M_050219_2,9799, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9800 57.376 190.0 133950.0 25 0 4134.3 -1 0 73 1079.3609042194369 0 1079.361621081829 PEAK CID FTMS 0 0 0 9798 296926.125 1.0 0 0.0 2 2 N 1 -1 3.9794 0.0 0.0 0.18451 0.0 0.0 1283.0021296285238 756.6394747369749 2039.6416043654983 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.18451 - 3 + 1 2.295 26635.6 1.0 5614 4184 9798 DOHH2_400M_050219_2,9800 DOHH2_400M_050219_2,9800, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9801 57.381 276.0 27470.0 25 0 2345.9 -1 0 25 1123.078051745892 0 1123.078051745892 PEAK CID FTMS 0 0 0 -1 0 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.295 14833.0 1.0 5615 4184 9798 DOHH2_400M_050219_2,9801 DOHH2_400M_050219_2,9801, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9802 57.384 160.0 23760.0 25 0 2440.2 -1 0 13 1098.674731433392 0 1098.674731433392 PEAK CID FTMS 0 0 0 -1 0 4 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.295 16707.8 1.0 5616 4184 9798 DOHH2_400M_050219_2,9802 DOHH2_400M_050219_2,9802, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9806 57.409 800.0 203710.0 25 0 11828.0 -1 0 197 884.5747945083154 0 884.6218749880791 PEAK CID FTMS 0 0 0 -1 0 1 2 PA 2 -1 6.4537 0.0 0.0 0.3652 0.0 0.0 1321.939736866437 274.08454309635005 1596.024279962787 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PA 0.3652 - 338 + 1 2.295 105905.6 0.3700000047683716 5617 4187 9805 DOHH2_400M_050219_2,9806 DOHH2_400M_050219_2,9806, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9809 57.429 800.0 149160.0 25 0 1592.1 -1 0 136 835.0969412236412 0 834.9826537966728 PEAK CID FTMS 0 0 0 -1 0 1 2 D 1 -1 3.4949 0.0 0.0 0.2095 0.0 0.0 1342.0553803947448 208.0737246149047 1550.1291050096495 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.2095 - 46 + 1 2.295 83480.3 0.3899999856948852 5618 4189 9808 DOHH2_400M_050219_2,9809 DOHH2_400M_050219_2,9809, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9810 57.443 800.0 100660.0 25 0 5809.1 -1 0 140 959.0482055544852 0 959.0482055544852 PEAK CID FTMS 0 0 0 -1 0 2 2 S 1 -1 5.4846 0.0 0.0 0.28624 0.0 0.0 1693.9804462878783 132.04610620670158 1826.02655249458 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.28624 - 132 + 1 2.295 59234.7 0.4300000071525574 5619 4189 9808 DOHH2_400M_050219_2,9810 DOHH2_400M_050219_2,9810, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9811 57.457 800.0 130180.0 25 0 6769.3 -1 0 161 935.4034803098668 0 935.147509753704 PEAK CID FTMS 0 0 0 9808 11503.5 1.0 0 0.0 3 2 S 1 -1 5.9862 0.0 0.0 0.32032 0.0 0.0 1646.69117890411 132.04607568912346 1778.7372545932335 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1382104921644452 0.0 S 0.32032 - 62 + 1 2.295 67065.9 0.4199999868869781 5620 4189 9808 DOHH2_400M_050219_2,9811 DOHH2_400M_050219_2,9811, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9814 57.476 728.0 177120.0 25 0 6404.1 -1 0 117 791.3736609951023 2371.099153585507 3 792.1041747927666 MULTI CID FTMS 0 0 0 9813 29371.2734375 0.4005835836854423 -16 0.1647491455078125 1 2 {[HG]|PP}APPPPP[EP]M 11 -1 31.05 0.0 0.0 1.3095 0.0 0.0 0.0 1260.5079419978697 1260.5079419978697 -5.126877605797478 0.0 -5.126877605797478 0.0 0 0.5 0.0 0.0 0.0 {[HG]|PP}APPPPP[EP]M 1.3095 - 2705 1 2.316 97574.0 1.0 5621 4191 9813 DOHH2_400M_050219_2,9814 DOHH2_400M_050219_2,9814, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9817 57.491 496.0 194070.0 25 0 9776.1 -1 0 86 791.3736609951023 2371.099153585507 3 791.7070190310478 MULTI CID FTMS 0 0 0 9816 70206.390625 0.4849549535256031 -24 0.2666969299316406 1 2 {[HG]|PP}APPGDC[RN]AGM 13 -1 33.684 0.0 0.0 1.4206 0.0 0.0 0.0 1104.553799480821 1104.553799480821 14.677712972991763 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3054621874040891 0.0 {[HG]|PP}APPGDC[RN]AGM 1.4206 - 7910 1 2.316 80490.2 1.0 5622 4193 9816 DOHH2_400M_050219_2,9817 DOHH2_400M_050219_2,9817, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9822 57.52 800.0 88830.0 25 0 12508.0 -1 0 51 1186.554289387042 2371.094025840884 2 1187.056689441204 MULTI CID FTMS 0 0 0 9821 85226.5625 0.679690463891078 -2 0.0081214904785156 1 2 [QP][QT]PPPP{M(Oxidation (M))|F} 9 -1 48.918 0.0 0.0 2.0631 0.0 0.0 0.0 1378.5937566360592 1378.5937566360592 10.50907468880581 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 1.579689690656103 [QP][QT]PPPP{M(Oxidation (M))|F} 2.0631 - 775 1 2.316 50243.1 0.3899999856948852 5623 4197 9821 DOHH2_400M_050219_2,9822 DOHH2_400M_050219_2,9822, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9831 57.565 800.0 81754.0 25 0 3474.2 + 35244 SSELFTLTY 9 98 1060.5196352913829 1059.512358824783 1 1062.527026355267 MULTI CID FTMS 0 0 0 9830 93950.6171875 0.5279384161354509 2 -0.0204238891601562 1 Unmodified _SSELFTLTY_ ENSG00000054116|ENST00000373166|TRAPPC3;ENST00000497251.1_1_1:36605278-36614725:-|nuORF 26.88365393820708 0.1891292719743517 2 {[QN]|[E{I|L}]|[KN]}{[CA]|SS}[KC]{I|L}T 8 7 40.37 0.0 0.0 3.8103 0.0 0.0 0.0 195.0596970418329 195.0596970418329 6.203591984206142 0.0 0.0 0.0 0 0.0 2.0 1.3441876774005248 0.805462187404089 {[QN]|[E{I|L}]|[KN]}{[CA]|SS}[KC]{I|L}T 3.8103 - 1129 1 2.316 49077.2 0.5199999809265137 5624 4205 9830 DOHH2_400M_050219_2,9831 DOHH2_400M_050219_2,9831,SSELFTLTY False True False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9835 57.587 664.0 19740.0 25 0 859.6 -1 0 42 1117.9349591714622 0 1117.533740222454 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.316 17312.4 1.0 5625 4208 9834 DOHH2_400M_050219_2,9835 DOHH2_400M_050219_2,9835, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9841 57.612 363.0 29338.0 25 0 1396.0 -1 0 33 1138.503710925579 0 1138.503710925579 PEAK CID FTMS 0 0 0 -1 0 1 2 VV 2 -1 6.4537 0.0 0.0 0.28368 0.0 0.0 1517.6305164783082 556.2060030572874 2073.8365195355955 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV 0.28368 - 4 + 1 2.316 15644.3 1.0 5626 4213 9840 DOHH2_400M_050219_2,9841 DOHH2_400M_050219_2,9841, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9848 57.64 165.0 348330.0 25 0 25310.0 -1 0 116 878.4216796755791 0 878.4216796755791 PEAK CID FTMS 0 0 0 -1 0 1 2 A 1 -1 3.9794 0.0 0.0 0.22677 0.0 0.0 1548.7226337878783 132.04615198306877 1680.768785770947 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.22677 - 41 + 1 2.316 43808.2 1.0 5627 4219 9847 DOHH2_400M_050219_2,9848 DOHH2_400M_050219_2,9848, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9849 57.643 177.0 351070.0 25 0 18035.0 -1 0 125 868.4410278201103 0 868.4410278201103 PEAK CID FTMS 0 0 0 -1 0 2 2 Y 1 -1 5.4846 0.0 0.0 0.31614 0.0 0.0 1386.7221607654174 182.0575350397094 1568.7796958051267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.31614 - 83 + 1 2.316 46342.3 1.0 5628 4219 9847 DOHH2_400M_050219_2,9849 DOHH2_400M_050219_2,9849, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9851 57.66 800.0 200130.0 25 0 2068.8 -1 0 166 822.5382409151082 0 822.4189330935478 PEAK CID FTMS 0 0 0 9850 5414.30517578125 0.7087455006297441 -1 0.0118827819824218 1 2 {M(Oxidation (M))|F} 1 -1 3.4949 0.0 0.0 0.2127 0.0 0.0 677.615259798386 815.3814791315061 1492.9967389298922 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.2127 - 178 + 1 2.316 108631.8 0.6899999976158142 5629 4220 9850 DOHH2_400M_050219_2,9851 DOHH2_400M_050219_2,9851, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9854 57.672 336.0 202450.0 25 0 2320.1 -1 0 77 829.778958628635 0 829.6810790896416 PEAK CID FTMS 0 0 0 9853 50814.5859375 1.0 0 0.0 1 2 N 1 -1 5.4846 0.0 0.0 0.33088 0.0 0.0 1309.397686689107 231.07911096744377 1540.476797656551 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.33088 - 9 + 1 2.316 48633.5 1.0 5630 4222 9853 DOHH2_400M_050219_2,9854 DOHH2_400M_050219_2,9854, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9855 57.675 182.0 149840.0 25 0 7878.6 -1 0 80 956.4226136519932 0 956.0970947146416 PEAK CID FTMS 0 0 0 9853 163543.609375 1.0 0 0.0 2 2 S 1 -1 6.9897 0.0 0.0 0.36579 0.0 0.0 1688.72917093016 132.04616724185783 1820.7753381720177 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.36579 - 12 + 1 2.316 27069.8 1.0 5631 4222 9853 DOHH2_400M_050219_2,9855 DOHH2_400M_050219_2,9855, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9856 57.681 275.0 66919.0 25 0 6589.0 -1 FLHSWWCVFW 10 56 734.3376342654228 0 734.3376342654228 PEAK CID FTMS 0 0 0 -1 0 3 Carbamidomethyl (C) _FLHSWWC(Carbamidomethyl (C))VFW_ ENSG00000130511|ENST00000270061|SSBP4;ENSG00000145687|ENST00000615665|SSBP2;ENSG00000157216|ENST00000610401|SSBP3;ENST00000506960.5_1_5:80911285-80946133:-|nuORF;ENST00000589764.1_1_18:12067489-12068164:-|nuORF;ENST00000598159.6_1_19:18538161-18542842:+|nuORF;nc|ENSG00000130511|Q9BWG4-2|SSBP4;nc|ENSG00000145687|P81877-2|SSBP2;nc|ENSG00000145687|P81877-3|SSBP2;nc|ENSG00000145687|P81877-4|SSBP2;nc|ENSG00000145687|P81877-5|SSBP2;nc|ENSG00000145687|P81877|SSBP2;nc|ENSG00000157216|Q9BWW4-2|SSBP3;nc|ENSG00000157216|Q9BWW4-3|SSBP3 0.4583401331227399 0.3961065659209837 2 V 1 -1 5.4846 0.0 0.0 0.37395 0.0 0.0 585.6236805408081 778.9257296197874 1364.5494101605957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.37395 + + 4 + 1 2.316 22445.5 1.0 5632 4222 9853 DOHH2_400M_050219_2,9856 DOHH2_400M_050219_2,9856,FLHSWWCVFW False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9857 57.694 800.0 86454.0 25 0 995.23 -1 0 107 1167.325488269329 0 1167.325488269329 PEAK CID FTMS 0 0 0 -1 0 4 2 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.1706 0.0 0.0 1455.908775755652 726.6760347955686 2182.5848105512205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.1706 - 5 + 1 2.316 43952.8 0.9100000262260436 5633 4222 9853 DOHH2_400M_050219_2,9857 DOHH2_400M_050219_2,9857, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9858 57.697 139.0 390980.0 25 0 28454.0 -1 0 121 783.596122778559 0 783.5682861208916 PEAK CID FTMS 0 0 0 -1 0 5 2 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.35041 0.0 0.0 1283.0437032213772 132.04598413638908 1415.0896873577665 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.35041 - 102 + 1 2.316 40980.1 1.0 5634 4222 9853 DOHH2_400M_050219_2,9858 DOHH2_400M_050219_2,9858, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9859 57.701 211.0 206950.0 25 0 12801.0 + 33112 SESPIVVVL 9 82 942.5507299237294 941.5434534571292 1 942.5524169802666 MULTI CID FTMS 0 0 0 9853 186040.453125 0.0444034869743783 54 -0.7117385864257812 6 Unmodified _SESPIVVVL_ ENSG00000140612|ENST00000268220|SEC11A;ENSG00000166562|ENST00000587834|SEC11C;ENST00000585864.1_1_18:56807180-56819918:+|nuORF;nc|ENSG00000140612|P67812-2|SEC11A;nc|ENSG00000140612|P67812-3|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A 36.04419817259434 0.0971720506436186 2 [{I|L}P]VS{[ES]|[DT]|[{I|L}C]}VV{I|L} 9 5 + 54.627 0.0 0.0 5.8018 5.8018 78.883 0.0 0.0 0.0 7.147642715192504 42.31939364284848 7.147642715192504 2.9659780392387347 0 0.0 0.0 1.274227503252014 0.0 [{I|L}P]VS{[ES]|[DT]|[{I|L}C]}VV{I|L};[{I|L}P]S{[ES]|[DT]|[{I|L}C]}VVV{I|L};[{I|L}P]SV{[ES]|[DT]|[{I|L}C]}VV{I|L};[{I|L}P]VSV{[ES]|[DT]|[{I|L}C]}V{I|L};[{I|L}P]VVS{[ES]|[DT]|[{I|L}C]}V{I|L};[{I|L}P]SVV{[ES]|[DT]|[{I|L}C]}V{I|L} 5.8018;5.4868;5.4821;5.3507;5.031;5.031 -;-;-;-;-;- 204 1 2.316 38058.3 1.0 5635 4222 9853 DOHH2_400M_050219_2,9859 DOHH2_400M_050219_2,9859,SESPIVVVL True True SESPIVVVL 57.701279 942.552416980267 30063906.0 9853.0 ENSG00000140612|ENST00000268220|SEC11A;;nc|ENSG00000140612|P67812-3|SEC11A;;nc|ENSG00000140612|P67812-4|SEC11A;;ENSG00000166562|ENST00000587834|SEC11C;;nc|ENSG00000140612|P67812-2|SEC11A;;ENST00000585864.1_1_18:56807180-56819918:+|nuORF 7.275090058644612 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9860 57.706 248.0 247810.0 25 0 14621.0 -1 0 127 814.7460056159714 2441.216187448114 3 815.6274291872978 MULTI CID FTMS 0 0 0 -1 0 7 2 [QP]G 3 -1 8.4515 0.0 0.0 0.3462 0.0 0.0 0.0 2156.060003936648 2156.060003936648 2.9669088138862687 0.0 0.0 0.0 0 0.0 0.5228787452803376 0.0 0.1171302707394362 [QP]G 0.3462 - 170 1 2.316 46334.7 1.0 5636 4222 9853 DOHH2_400M_050219_2,9860 DOHH2_400M_050219_2,9860, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9862 57.723 800.0 89640.0 25 0 1257.8 -1 0 132 1026.1359440766416 0 1026.136401355267 PEAK CID FTMS 0 0 0 9861 83798.9296875 0.5773824192171584 1 -0.0313034057617187 1 2 G 1 -1 3.9794 0.0 0.0 0.19409 0.0 0.0 1768.1234678878552 222.08918176822505 1990.21264965608 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19409 - 29 + 1 2.3 53090.6 0.8799999952316284 5637 4223 9861 DOHH2_400M_050219_2,9862 DOHH2_400M_050219_2,9862, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9863 57.727 208.0 222830.0 25 0 16477.0 -1 0 107 803.5195239764904 0 803.4998046755791 PEAK CID FTMS 0 0 0 -1 0 2 2 A 1 -1 5.4846 0.0 0.0 0.34171 0.0 0.0 1398.9182766133338 132.0461825006469 1530.9644591139806 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.34171 - 24 + 1 2.3 36565.2 1.0 5638 4223 9861 DOHH2_400M_050219_2,9863 DOHH2_400M_050219_2,9863, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9864 57.732 280.0 130840.0 25 0 2765.9 -1 0 90 1009.618823230267 0 1009.618823230267 PEAK CID FTMS 0 0 0 -1 0 3 2 V 1 -1 5.4846 0.0 0.0 0.27189 0.0 0.0 562.007225462684 1353.1093233697875 1915.116548832472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.27189 - 7 + 1 2.3 35501.8 1.0 5639 4223 9861 DOHH2_400M_050219_2,9864 DOHH2_400M_050219_2,9864, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9865 57.737 231.0 284190.0 25 0 3289.9 -1 0 106 901.2951670315028 0 901.5463134646416 PEAK CID FTMS 0 0 0 -1 0 4 2 G 1 -1 3.0989 0.0 0.0 0.17211 0.0 0.0 1518.441791727265 222.0891512506469 1740.5309429779115 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.17211 - 16 + 1 2.3 46604.2 1.0 5640 4223 9861 DOHH2_400M_050219_2,9865 DOHH2_400M_050219_2,9865, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9867 57.753 800.0 35463.0 25 0 806.57 + -1 KLLKKLIRKMK 11 74 728.9922363162041 0 728.9922363162041 PEAK CID FTMS 0 0 0 -1 0 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))KLLKKLIRKM(Oxidation (M))K_ REV__ENST00000379463.6_1_16:66850506-66850557:-|nuORF 0.0 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.3 30990.7 0.4199999868869781 5641 4224 9866 DOHH2_400M_050219_2,9867 DOHH2_400M_050219_2,9867,KLLKKLIRKMK False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9869 57.761 202.0 816990.0 25 0 41022.0 -1 0 207 833.2597589189293 0 833.2703124880791 PEAK CID FTMS 0 0 0 -1 0 1 2 M[HK]S 4 -1 13.812 0.0 0.0 0.82981 0.0 0.0 1062.1935768204771 116.05111108951404 1178.2446879099912 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 M[HK]S 0.82981 - 307 + 1 2.3 108848.7 1.0 5642 4225 9868 DOHH2_400M_050219_2,9869 DOHH2_400M_050219_2,9869, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9870 57.764 124.0 307450.0 25 0 5552.4 -1 0 91 1001.4235896239996 0 1001.840991199017 PEAK CID FTMS 0 0 0 -1 0 2 2 C 1 -1 2.4743 0.0 0.0 0.12366 0.0 0.0 1280.3083476056177 614.4898165338499 1894.798164139468 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.12366 - 2 + 1 2.3 36050.0 1.0 5643 4225 9868 DOHH2_400M_050219_2,9870 DOHH2_400M_050219_2,9870, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9872 57.771 285.0 221990.0 25 0 12858.0 -1 0 122 939.3348476194046 0 939.6888915896416 PEAK CID FTMS 0 0 0 9871 49853.07421875 0.8860089803402499 1 -0.0292587280273437 1 2 H 1 -1 6.9897 0.0 0.0 0.37246 0.0 0.0 1269.0158123268966 467.5524691217407 1736.5682814486372 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.37246 - 40 + 1 2.3 46534.0 1.0 5644 4226 9871 DOHH2_400M_050219_2,9872 DOHH2_400M_050219_2,9872, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9873 57.776 272.0 223970.0 25 0 2953.7 -1 0 106 1126.534716784954 0 1126.534716784954 PEAK CID FTMS 0 0 0 -1 0 2 2 A 1 -1 4.6041 0.0 0.0 0.20453 0.0 0.0 1942.905632445105 234.0880068414672 2176.9936392865725 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.20453 - 3 + 1 2.3 40793.7 1.0 5645 4226 9871 DOHH2_400M_050219_2,9873 DOHH2_400M_050219_2,9873, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9874 57.79 800.0 61795.0 25 0 958.36 + -1 QSFCKGCEY 9 101 1121.438192165314 1120.430915698714 1 1121.409960925579 MULTI CID FTMS 0 0 0 -1 0 3 Carbamidomethyl (C) _QSFC(Carbamidomethyl (C))KGCEY_ REV__ENSG00000164631|ENST00000405858|ZNF12;REV__nc|ENSG00000164631|P17014-3|ZNF12;REV__nc|ENSG00000164631|P17014-4|ZNF12;REV__nc|ENSG00000164631|P17014-5|ZNF12 3.5964929083625545 0.7891324200061827 2 A 1 -1 5.4846 0.0 0.0 0.4895 0.0 0.0 425.1971980394384 621.1868380182249 1046.3840360576633 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.4895 - 33 + 1 2.3 34933.0 0.9800000190734864 5646 4226 9871 DOHH2_400M_050219_2,9874 DOHH2_400M_050219_2,9874,QSFCKGCEY False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9875 57.793 144.0 127460.0 25 0 3832.5 -1 0 59 913.71803604643 0 913.8401977419852 PEAK CID FTMS 0 0 0 -1 0 4 2 C 1 -1 3.9794 0.0 0.0 0.218 0.0 0.0 1128.959313204385 590.4462984674436 1719.4056116718284 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.218 - 4 + 1 2.3 20706.6 1.0 5647 4226 9871 DOHH2_400M_050219_2,9875 DOHH2_400M_050219_2,9875, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9877 57.801 245.0 72173.0 25 0 2671.3 -1 0 53 1104.299360968022 0 1104.300830066204 PEAK CID FTMS 0 0 0 -1 0 1 2 R 1 -1 5.4846 0.0 0.0 0.24855 0.0 0.0 1704.441970371788 343.02729211978755 2047.469262491576 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.24855 - 5 + 1 2.3 24990.3 1.0 5648 4227 9876 DOHH2_400M_050219_2,9877 DOHH2_400M_050219_2,9877, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9878 57.805 170.0 233060.0 25 0 3650.0 -1 0 89 862.132525300777 3444.500995336708 4 862.3832275271416 MULTI CID FTMS 0 0 0 9876 22090.76171875 0.143722853266259 1 -0.0396385192871093 2 2 {M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3 -1 6.9627 0.0 0.0 0.20214 0.0 0.0 2985.3238235611207 0.0 2985.3238235611207 0.0 3.863781092484688 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 0.20214 - 24 + 1 2.3 30575.8 1.0 5649 4227 9876 DOHH2_400M_050219_2,9878 DOHH2_400M_050219_2,9878, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9879 57.819 800.0 39799.0 25 0 2396.1 -1 0 84 1161.395922839642 0 1161.395922839642 PEAK CID FTMS 0 0 0 -1 0 3 2 Q{M(Oxidation (M))|F} 2 -1 7.9588 0.0 0.0 0.34294 0.0 0.0 1434.1509022204966 608.5438326471311 2042.694734867628 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{M(Oxidation (M))|F} 0.34294 - 10 + 1 2.3 29397.0 0.6299999952316284 5650 4227 9876 DOHH2_400M_050219_2,9879 DOHH2_400M_050219_2,9879, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9880 57.832 800.0 114750.0 25 0 10900.0 -1 0 110 1186.5521612950993 2371.0897696569987 2 1187.054492175579 MULTI CID FTMS 0 0 0 9876 102283.9375 1.0 0 0.0 4 2 {[HG]|PP}YPPPPP 8 -1 40.126 0.0 0.0 1.6923 0.0 0.0 0.0 1525.6388575878782 1525.6388575878782 2.6979531151190628 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[HG]|PP}YPPPPP 1.6923 - 1043 1 2.3 62864.0 0.5799999833106995 5651 4227 9876 DOHH2_400M_050219_2,9880 DOHH2_400M_050219_2,9880, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9882 57.849 800.0 65943.0 25 0 1051.1 -1 0 111 1079.642016589642 0 1079.642016589642 PEAK CID FTMS 0 0 0 -1 0 1 2 G 1 -1 3.0989 0.0 0.0 0.14365 0.0 0.0 1800.1402210681529 297.08555017642817 2097.225771244581 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.14365 - 18 + 1 2.3 43863.9 0.9100000262260436 5652 4228 9881 DOHH2_400M_050219_2,9882 DOHH2_400M_050219_2,9882, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9883 57.852 155.0 143170.0 25 0 3277.0 -1 0 65 998.221240222454 0 998.221240222454 PEAK CID FTMS 0 0 0 -1 0 2 2 P 1 -1 5.4846 0.0 0.0 0.27499 0.0 0.0 1538.1992725818236 356.15058313541255 1894.349855717236 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.27499 - 2 + 1 2.3 23694.3 1.0 5653 4228 9881 DOHH2_400M_050219_2,9883 DOHH2_400M_050219_2,9883, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9888 57.873 380.0 176890.0 25 0 9114.5 -1 0 124 863.7709651606375 0 863.8245117068291 PEAK CID FTMS 0 0 0 9887 27213.2109375 0.5427502423902699 -1 0.0037765502929687 1 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.40508 0.0 0.0 1443.3941814425657 132.0460146539672 1575.4401960965326 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.40508 - 39 + 1 2.333 46154.8 1.0 5654 4232 9887 DOHH2_400M_050219_2,9888 DOHH2_400M_050219_2,9888, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9889 57.882 475.0 114340.0 25 0 4225.6 + 35245 SSELFTLTY 9 99 1060.5196352913829 1059.512358824783 1 1060.518969714642 MULTI CID FTMS 0 0 0 9887 116187.453125 0.0971617189780903 13 -0.197296142578125 2 Unmodified _SSELFTLTY_ ENSG00000054116|ENST00000373166|TRAPPC3;ENST00000497251.1_1_1:36605278-36614725:-|nuORF 71.13359017698441 0.0206607516130725 2 [{I|L}T]DS{M(Oxidation (M))|F}T{I|L}TY 9 4 + 77.775 0.0 0.0 7.3406 7.3406 86.119 0.0 0.0 0.0 22.5 13.46787486224656 13.46787486224656 4.955678082598922 0 0.3494850021680094 2.0 2.6989700043360187 0.0 [{I|L}T]DS{M(Oxidation (M))|F}T{I|L}TY;[{I|L}T]{M(Oxidation (M))|F}DST{I|L}TY;[{I|L}T]D{M(Oxidation (M))|F}ST{I|L}TY;{[CA]|SS}E{I|L}{M(Oxidation (M))|F}T{I|L}TY;[{I|L}T]{M(Oxidation (M))|F}{[CA]|SS}E{I|L}TY;[{I|L}T]DS[VP]ET[QA];[{I|L}T]{M(Oxidation (M))|F}D[HK]HY;{[ET]|[MV]}W{M(Oxidation (M))|F}T{I|L}TY;[{I|L}T]D{M(Oxidation (M))|F}[HK]HY;[{I|L}T]DS[DP]{I|L}T[QA] 7.3406;6.8729;6.7777;5.217;4.9595;4.6923;4.6658;4.6574;4.5706;4.5103 -;-;-;+;-;-;-;-;-;- + 2276 1 2.333 40438.2 1.0 5655 4232 9887 DOHH2_400M_050219_2,9889 DOHH2_400M_050219_2,9889,SSELFTLTY True True SSELFTLTY 57.881571 1060.51896971464 4575734.0 9887.0 ENSG00000054116|ENST00000373166|TRAPPC3;;ENST00000497251.1_1_1:36605278-36614725:-|nuORF 7.034360249837239 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9890 57.893 629.0 56118.0 25 0 1674.6 -1 0 80 1144.676690723392 0 1144.758959949017 PEAK CID FTMS 0 0 0 -1 0 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.333 28304.8 1.0 5656 4232 9887 DOHH2_400M_050219_2,9890 DOHH2_400M_050219_2,9890, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9894 57.91 289.0 417630.0 25 0 6147.2 -1 0 162 1019.2227534847937 0 1018.809008777142 PEAK CID FTMS 0 0 0 -1 0 1 2 E 1 -1 7.3464 0.0 0.0 0.36075 0.0 0.0 1607.2805766943934 297.08331488386204 1904.363891578256 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 E 0.36075 - 61 + 1 2.333 81837.8 1.0 5657 4235 9893 DOHH2_400M_050219_2,9894 DOHH2_400M_050219_2,9894, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9895 57.914 173.0 168830.0 25 0 6183.3 -1 0 80 1062.6908623986765 0 1062.510302722454 PEAK CID FTMS 0 0 0 9893 36417.71875 1.0 0 0.0 2 2 G 1 -1 4.6041 0.0 0.0 0.21683 0.0 0.0 1912.2706122711827 151.0521639459594 2063.3227762171423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21683 - 2 + 1 2.333 29430.6 1.0 5658 4235 9893 DOHH2_400M_050219_2,9895 DOHH2_400M_050219_2,9895, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9896 57.923 499.0 39672.0 25 0 1020.7 -1 0 58 1029.283251941204 0 1029.283251941204 PEAK CID FTMS 0 0 0 -1 0 3 2 R 1 -1 3.9794 0.0 0.0 0.1935 0.0 0.0 909.1556629626832 988.2788179986936 1897.434480961377 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.1935 - 2 + 1 2.333 22536.4 1.0 5659 4235 9893 DOHH2_400M_050219_2,9896 DOHH2_400M_050219_2,9896, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9897 57.925 110.0 48369.0 25 0 2988.7 -1 0 21 972.2592791431452 0 971.909716784954 PEAK CID FTMS 0 0 0 -1 0 4 2 W 1 -1 6.9897 0.0 0.0 0.35983 0.0 0.0 1234.2349146321903 519.1553438775999 1753.3902585097903 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.35983 - 1 + 1 2.333 16364.8 1.0 5660 4235 9893 DOHH2_400M_050219_2,9897 DOHH2_400M_050219_2,9897, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9898 57.939 800.0 13743.0 25 0 2001.6 + -1 SFNGCCCNYSM 11 33 708.2277709841728 0 708.2277709841728 PEAK CID FTMS 0 0 0 -1 0 5 3 Carbamidomethyl (C),Oxidation (M) _SFNGC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))NYSM(Oxidation (M))_ REV__ENSG00000186980|ENST00000334160|KRTAP23-1 0.0 0.4761840153648598 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.333 16327.7 0.5099999904632568 5661 4235 9893 DOHH2_400M_050219_2,9898 DOHH2_400M_050219_2,9898,SFNGCCCNYSM False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9900 57.949 330.0 156750.0 25 0 8411.1 -1 0 121 902.730029284954 0 902.730029284954 PEAK CID FTMS 0 0 0 -1 0 1 2 {M(Oxidation (M))|F}A 2 -1 7.4743 0.0 0.0 0.41444 0.0 0.0 1450.312431761511 132.0460604303344 1582.3584921918457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}A 0.41444 - 52 + 1 2.333 37330.6 1.0 5662 4236 9899 DOHH2_400M_050219_2,9900 DOHH2_400M_050219_2,9900, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9901 57.963 800.0 35473.0 25 0 927.82 -1 0 71 992.4210693240166 0 992.4210693240166 PEAK CID FTMS 0 0 0 -1 0 2 2 E 1 -1 4.6041 0.0 0.0 0.2322 0.0 0.0 1522.3452381579957 328.41987024478755 1850.765108402783 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.2322 - 4 + 1 2.333 27871.0 0.4600000083446502 5663 4236 9899 DOHH2_400M_050219_2,9901 DOHH2_400M_050219_2,9901, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9902 57.976 800.0 123860.0 25 0 1277.0 -1 0 88 1000.908679187298 0 1000.908679187298 PEAK CID FTMS 0 0 0 -1 0 3 2 {I|L} 1 -1 6.9897 0.0 0.0 0.34952 0.0 0.0 937.279564329871 946.409311162756 1883.6888754926272 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.34952 - 15 + 1 2.333 62093.6 0.4300000071525574 5664 4236 9899 DOHH2_400M_050219_2,9902 DOHH2_400M_050219_2,9902, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9907 57.995 232.0 204870.0 25 0 8790.6 -1 0 110 915.8633911013604 0 915.8633911013604 PEAK CID FTMS 0 0 0 -1 0 1 2 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.29975 0.0 0.0 1547.5778736560424 132.04592310123283 1679.6237967572752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.29975 - 49 + 1 2.333 34486.0 1.0 5665 4240 9906 DOHH2_400M_050219_2,9907 DOHH2_400M_050219_2,9907, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9908 57.998 124.0 114480.0 25 0 3508.5 -1 0 48 1069.8208674185823 0 1069.479541003704 PEAK CID FTMS 0 0 0 9906 16773.48046875 0.466081580566076 -1 0.0042800903320312 2 2 R 1 -1 0.71334 0.0 0.0 0.033371 0.0 0.0 993.7321146205647 984.765268194006 1978.497382814571 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.033371 - 1 + 1 2.333 22630.7 1.0 5666 4240 9906 DOHH2_400M_050219_2,9908 DOHH2_400M_050219_2,9908, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9913 58.023 587.0 214250.0 25 0 10813.0 -1 0 172 857.1131264887857 3424.4234000887427 4 857.3638793826103 MULTI CID FTMS 0 0 0 9912 23773.45703125 0.2514159174318748 1 -0.0509872436523437 1 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NP 4 -1 16.905 0.0 0.0 0.49367 0.0 0.0 0.0 2976.201512231574 2976.201512231574 7.775488998144585 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NP 0.49367 - 1224 1 2.333 80973.6 1.0 5667 4244 9912 DOHH2_400M_050219_2,9913 DOHH2_400M_050219_2,9913, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9914 58.037 800.0 53496.0 25 0 2573.0 -1 0 94 911.4831536167892 0 911.6682006716728 PEAK CID FTMS 0 0 0 9912 17823.265625 0.5944483011751046 1 -0.0509872436523437 2 2 C 1 -1 3.9794 0.0 0.0 0.21853 0.0 0.0 760.8584448294781 954.0515230768186 1714.9099679062967 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.21853 - 20 + 1 2.333 33665.2 0.8199999928474426 5668 4244 9912 DOHH2_400M_050219_2,9914 DOHH2_400M_050219_2,9914, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9915 58.047 595.0 53549.0 25 0 1136.9 -1 0 66 907.9494506716728 0 907.9494506716728 PEAK CID FTMS 0 0 0 -1 0 3 2 C 1 -1 3.0989 0.0 0.0 0.17085 0.0 0.0 1076.5647816150267 631.2860201471311 1707.850801762158 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.17085 - 6 + 1 2.333 27269.9 1.0 5669 4244 9912 DOHH2_400M_050219_2,9915 DOHH2_400M_050219_2,9915, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9916 58.061 800.0 29698.0 25 0 1029.2 -1 0 67 1142.162566965299 0 1142.090014636517 PEAK CID FTMS 0 0 0 -1 0 4 2 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.20173 0.0 0.0 810.5139023858732 1321.7012423151002 2132.2151447009733 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20173 - 5 + 1 2.333 24961.4 0.4099999964237213 5670 4244 9912 DOHH2_400M_050219_2,9916 DOHH2_400M_050219_2,9916, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9920 58.075 172.0 35996.0 25 0 2947.3 -1 0 20 1055.237980114048 0 1055.493823230267 PEAK CID FTMS 0 0 0 -1 0 1 2 SH 2 -1 8.5835 0.0 0.0 0.4071 0.0 0.0 1075.2183175505586 806.1194552057249 1881.337772756284 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SH 0.4071 - 3 + 1 2.333 13456.7 1.0 5671 4247 9919 DOHH2_400M_050219_2,9920 DOHH2_400M_050219_2,9920, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9927 58.102 231.0 250790.0 25 0 14164.0 -1 0 119 869.9292033720545 0 870.3715087771416 PEAK CID FTMS 0 0 0 9926 50727.00390625 0.693353940491678 1 -0.0144271850585937 1 2 Y 1 -1 6.9897 0.0 0.0 0.40221 0.0 0.0 1455.7099254435243 116.05114160709218 1571.7610670506167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.40221 - 49 + 1 2.333 40324.4 1.0 5672 4253 9926 DOHH2_400M_050219_2,9927 DOHH2_400M_050219_2,9927, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9928 58.109 421.0 32688.0 25 0 1376.7 -1 0 50 800.0128051638603 0 800.0128051638603 PEAK CID FTMS 0 0 0 -1 0 2 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.4374 0.0 0.0 994.7054066150268 453.2032869928344 1447.908693607861 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.4374 - 4 + 1 2.333 25473.1 1.0 5673 4253 9926 DOHH2_400M_050219_2,9928 DOHH2_400M_050219_2,9928, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9932 58.124 245.0 192020.0 25 0 11172.0 -1 0 115 842.251857962111 0 842.4354736208916 PEAK CID FTMS 0 0 0 -1 0 1 2 S 1 -1 5.4846 0.0 0.0 0.32598 0.0 0.0 1476.3833107955124 116.05106531314686 1592.4343761086593 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.32598 - 6 + 1 2.333 38909.1 1.0 5674 4256 9931 DOHH2_400M_050219_2,9932 DOHH2_400M_050219_2,9932, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9933 58.138 800.0 38752.0 25 0 2894.6 -1 0 77 813.1173031477102 0 813.4656860232353 PEAK CID FTMS 0 0 0 -1 0 2 2 A 1 -1 5.4846 0.0 0.0 0.33767 0.0 0.0 1418.1145673776484 132.04583154849846 1550.1603989261469 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.33767 - 14 + 1 2.333 29766.5 0.7799999713897705 5675 4256 9931 DOHH2_400M_050219_2,9933 DOHH2_400M_050219_2,9933, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9937 58.162 800.0 20863.0 25 0 702.4 -1 0 51 1068.573413074017 0 1068.573413074017 PEAK CID FTMS 0 0 0 -1 0 1 2 M 1 -1 5.4846 0.0 0.0 0.25687 0.0 0.0 1375.3160023181529 625.7589205377561 2001.0749228559089 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.25687 - 3 + 1 2.333 21181.4 0.550000011920929 5676 4259 9936 DOHH2_400M_050219_2,9937 DOHH2_400M_050219_2,9937, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9938 58.176 800.0 30807.0 25 0 765.88 -1 0 73 1027.6080068994477 0 1027.596606433392 PEAK CID FTMS 0 0 0 -1 0 2 2 E 1 -1 0.48455 0.0 0.0 0.0236 0.0 0.0 1152.104611355733 769.0522554986936 1921.1568668544264 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.0236 - 2 + 1 2.333 24234.1 0.6899999976158142 5677 4259 9936 DOHH2_400M_050219_2,9938 DOHH2_400M_050219_2,9938, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9943 58.198 366.0 302940.0 25 0 62797.0 + -1 DLIGKLTSL 9 91 959.5734741091728 0 959.5734741091728 PEAK CID FTMS 0 0 0 -1 0 1 nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;ENSG00000108465|ENST00000338399|CDK5RAP3;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3;nc|ENSG00000108465|Q96JB5-3|CDK5RAP3 2 {I|L}ST{I|L}KG{I|L} 7 -1 47.026 0.0 0.0 2.453 0.0 0.0 976.5739726599046 225.0889681451781 1201.6629408050828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {I|L}ST{I|L}KG{I|L} 2.453 - 198 + 1 2.359 75597.5 1.0 5678 4263 9942 DOHH2_400M_050219_2,9943 DOHH2_400M_050219_2,9943, False False DLIGKLTSL 58.19844 959.573474109173 666784.125 9942.0 nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;;ENSG00000108465|ENST00000338399|CDK5RAP3;;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3;;nc|ENSG00000108465|Q96JB5-3|CDK5RAP3 6.516092777252197 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9944 58.212 800.0 15921.0 25 0 1913.2 23017 LSIKGLIES 9 39 480.2924377322197 0 480.2924377322197 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _LSIKGLIES_ ENSG00000018189|ENST00000381006|RUFY3;ENSG00000204130|ENST00000602465|RUFY2;ENST00000472394.2_1_10:70143908-70166946:-|nuORF;nc|ENSG00000018189|Q7L099-2|RUFY3;nc|ENSG00000018189|Q7L099-4|RUFY3;nc|ENSG00000018189|Q7L099|RUFY3;nc|ENSG00000204130|Q8WXA3-1|RUFY2;nc|ENSG00000204130|Q8WXA3-3|RUFY2;nc|ENSG00000204130|Q8WXA3-4|RUFY2 1.844237919475145 0.3444685223463735 2 D 1 9 3.0989 0.0 0.0 0.32329 0.0 0.0 758.4533466785035 82.0671633356078 840.5205100141113 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.32329 - 1 + 1 2.359 18323.5 0.3600000143051147 5679 4263 9942 DOHH2_400M_050219_2,9944 DOHH2_400M_050219_2,9944,LSIKGLIES False False False False self_gene PXD020620_cell_line DOHH2_400M_050219_2 9949 58.241 800.0 211690.0 25 0 15669.0 + 18439 YTDYGGLIFNSY 12 131 706.822355273689 1411.630157614178 2 706.8212768435478 MULTI CID FTMS 0 0 0 9948 66312.1015625 0.3197393927476583 -5 0.0402488708496093 1 Unmodified _KYEDLYAFSYN_ ENSG00000198712|ENST00000361739|MT-CO2 20.41453444215458 0.6105011870913812 2 [NS]Y{I|L}EY{M(Oxidation (M))|F}{I|L} 8 9 51.319 0.0 0.0 3.6354 0.0 0.0 0.0 379.1226862609155 379.1226862609155 20.5006573083877 0.0 0.0 0.0 0 0.5501648626366046 1.2218487496163564 1.5629529932484498 0.0 [NS]Y{I|L}EY{M(Oxidation (M))|F}{I|L} 3.6354 - 6314 1 2.359 124352.9 0.7900000214576721 5680 4267 9948 DOHH2_400M_050219_2,9949 DOHH2_400M_050219_2,9949,KYEDLYAFSYN False False YTDYGGLIFNSY 58.240517 706.821276843548 772794.875 9948.0 ENSG00000198712|ENST00000361739|MT-CO2 6.723697821299235 2.0 False 12.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 9950 58.254 800.0 281500.0 25 0 13448.0 -1 0 215 874.0842555426761 0 873.6867553591728 PEAK CID FTMS 0 0 0 -1 0 2 2 {M(Oxidation (M))|F}Y 2 -1 8.5835 0.0 0.0 0.49157 0.0 0.0 1316.954905273049 116.0514391534789 1433.006344426528 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.49157 - 1152 + 1 2.359 143686.7 0.6600000262260437 5681 4267 9948 DOHH2_400M_050219_2,9950 DOHH2_400M_050219_2,9950, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9951 58.257 151.0 229140.0 25 0 10992.0 -1 0 85 949.5244647205928 0 949.8787109255792 PEAK CID FTMS 0 0 0 9948 12864.798828125 1.0 0 0.0 3 2 H 1 -1 5.4846 0.0 0.0 0.28911 0.0 0.0 842.5195582480231 914.4268282526 1756.946386500623 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.28911 - 6 + 1 2.359 29401.4 1.0 5682 4267 9948 DOHH2_400M_050219_2,9951 DOHH2_400M_050219_2,9951, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9952 58.271 800.0 112800.0 25 0 4505.1 -1 0 151 986.4301872797172 0 986.3600952029228 PEAK CID FTMS 0 0 0 9948 61470.6484375 1.0 0 0.0 4 2 E 1 -1 6.9897 0.0 0.0 0.35465 0.0 0.0 1540.6933690889282 298.0838717096313 1838.77724079856 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.35465 - 197 + 1 2.359 61036.3 0.6600000262260437 5683 4267 9948 DOHH2_400M_050219_2,9952 DOHH2_400M_050219_2,9952, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9954 58.285 535.0 78791.0 25 0 1276.5 -1 0 92 1126.4198491075551 0 1126.853686511517 PEAK CID FTMS 0 0 0 9953 30248.23046875 1.0 0 0.0 1 2 S 1 -1 4.6041 0.0 0.0 0.20455 0.0 0.0 1966.7128233598385 194.05803857974848 2160.770861939587 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.20455 - 20 + 1 2.359 32452.8 1.0 5684 4268 9953 DOHH2_400M_050219_2,9954 DOHH2_400M_050219_2,9954, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9955 58.298 800.0 133940.0 25 0 8050.7 + -1 WCPWCCGCRRR 11 173 827.3400415299121 0 827.0630981326103 PEAK CID FTMS 0 0 0 9953 12393.740234375 1.0 0 0.0 2 4 Carbamidomethyl (C) _WC(Carbamidomethyl (C))PWC(Carbamidomethyl (C))C(Carbamidomethyl (C))GC(Carbamidomethyl (C))RRR_ REV__ENST00000292408.8_1_5:176513967-176516637:+|nuORF;REV__ENST00000393648.6_2_5:176513947-176516637:+|nuORF;REV__ENST00000503708.5_1_5:176513947-176516637:+|nuORF;REV__ENST00000510911.5_1_5:176515491-176516637:+|nuORF;REV__ENST00000513166.1_1_5:176514597-176516637:+|nuORF;REV__ENST00000514472.1_1_5:176513947-176516637:+|nuORF 0.0 0.4761840153648598 2 S 1 -1 5.7439 0.0 0.0 0.34756 0.0 0.0 1430.5641792738882 132.04607568912346 1562.6102549630116 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1139829889124311 0.0 S 0.34756 - 154 + 1 2.359 75113.5 0.5799999833106995 5685 4268 9953 DOHH2_400M_050219_2,9955 DOHH2_400M_050219_2,9955,WCPWCCGCRRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9958 58.321 800.0 72617.0 25 0 3267.4 -1 0 116 1187.080126941204 0 1187.080126941204 PEAK CID FTMS 0 0 0 -1 0 1 2 PPPPPP 6 -1 24.641 0.0 0.0 1.0388 0.0 0.0 1432.6599354236207 354.1423739068969 1786.8023093305176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPPPP 1.0388 - 600 + 1 2.359 41595.1 0.6000000238418579 5686 4270 9957 DOHH2_400M_050219_2,9958 DOHH2_400M_050219_2,9958, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9961 58.332 116.0 86038.0 25 0 6656.9 -1 0 33 984.3674194216728 0 984.3674194216728 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.359 18303.3 1.0 5687 4272 9960 DOHH2_400M_050219_2,9961 DOHH2_400M_050219_2,9961, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9962 58.335 149.0 200850.0 25 0 12831.0 -1 0 77 929.550907711586 0 929.6328002810478 PEAK CID FTMS 0 0 0 -1 0 2 2 A 1 -1 3.0989 0.0 0.0 0.16687 0.0 0.0 1650.9810440835247 132.0458925836547 1783.0269366671794 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.16687 - 2 + 1 2.359 29173.9 1.0 5688 4272 9960 DOHH2_400M_050219_2,9962 DOHH2_400M_050219_2,9962, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9964 58.345 458.0 235610.0 25 0 14047.0 -1 RCGCSWRCRRW 11 172 820.3651611208916 0 820.3651611208916 PEAK CID FTMS 0 0 0 -1 0 1 3 Carbamidomethyl (C) _RC(Carbamidomethyl (C))GC(Carbamidomethyl (C))SWRC(Carbamidomethyl (C))RRW_ ENST00000591196.5_1_17:40824320-40824401:-|nuORF 0.2690200627634905 0.4761840153648598 2 Y 1 -1 4.6041 0.0 0.0 0.28096 0.0 0.0 1356.5817799060424 116.05133997135 1472.6331198773923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.28096 - 137 + 1 2.359 73219.2 1.0 5689 4273 9963 DOHH2_400M_050219_2,9964 DOHH2_400M_050219_2,9964,RCGCSWRCRRW False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9967 58.365 800.0 129870.0 25 0 1442.7 43428 WRRRLLLRRRR 11 129 819.0306884646416 0 819.0306884646416 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _WRRRLLLRRRR_ ENST00000431489.5_1_2:62933068-62933182:+|nuORF 0.0 0.4761840153648598 2 SY 2 11 8.5835 0.0 0.0 0.52465 0.0 0.0 1200.8692249744015 182.0579622858032 1382.9271872602048 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 0.52465 - 129 + 1 2.359 73916.9 0.4199999868869781 5690 4275 9966 DOHH2_400M_050219_2,9967 DOHH2_400M_050219_2,9967,WRRRLLLRRRR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 9968 58.375 538.0 8886.4 25 0 645.78 -1 0 19 1001.427111804485 0 1001.427111804485 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.359 12726.5 1.0 5691 4275 9966 DOHH2_400M_050219_2,9968 DOHH2_400M_050219_2,9968, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9971 58.395 800.0 10724.0 25 0 1345.6 -1 0 17 1163.7947187298694 5813.937211316347 5 1164.598437488079 MULTI CID FTMS 0 0 0 9970 12399.927734375 0.0529615053835056 4 -0.0422859191894531 1 2 N 1 -1 3.9794 0.0 0.0 0.068446 0.0 0.0 4537.983428212635 1158.8698214166627 5696.853249629297 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.068446 - 1 + 1 2.359 14485.2 0.3499999940395355 5692 4277 9970 DOHH2_400M_050219_2,9971 DOHH2_400M_050219_2,9971, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9972 58.409 800.0 15589.0 25 0 678.92 -1 0 38 1172.001391589642 0 1172.001391589642 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.359 17692.9 0.3400000035762787 5693 4277 9970 DOHH2_400M_050219_2,9972 DOHH2_400M_050219_2,9972, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9986 58.474 800.0 96141.0 25 0 1480.9 -1 0 130 1125.0129794236454 0 1125.283007800579 PEAK CID FTMS 0 0 0 -1 0 1 2 YG 2 -1 9.464 0.0 0.0 0.42099 0.0 0.0 1802.8141535720968 222.08883081607652 2024.9029843881733 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.42099 - 32 + 1 2.359 51522.1 0.3799999952316284 5694 4290 9985 DOHH2_400M_050219_2,9986 DOHH2_400M_050219_2,9986, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9987 58.477 139.0 916590.0 25 0 47896.0 + 6024 DSDGSFFLY 9 109 1050.4412636057766 1049.433987139177 1 1050.441332995892 MULTI CID FTMS 0 0 0 9985 576297.5 0.7942943698301901 2 -0.0412788391113281 2 Unmodified _DSDGSFFLY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 74.42276476219924 0.019389277360085 2 [SG]DSD{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Y 9 3 + 62.934 0.0 0.0 5.9969 5.9969 59.355 0.0 0.0 0.0 0.0 16.478174818886373 0.0 0.0 0 0.9361818737241734 0.0 2.2302046884880937 0.0 [SG]DSD{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Y;{[DS]|[MA]|[CV]|TT}GSD{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Y;[SG]{M(Oxidation (M))|F}DSD{M(Oxidation (M))|F}{I|L}Y;[SG]DS{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Y;{[DS]|[MA]|[CV]|TT}GS{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Y;{[DS]|[MA]|[CV]|TT}GDS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Y;[SG]DDS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Y;[WC(Carbamidomethyl (C))]D{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Y;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}GSD{M(Oxidation (M))|F}{I|L}Y;[SG]D{M(Oxidation (M))|F}SD{M(Oxidation (M))|F}{I|L}Y 5.9969;5.9969;5.6882;5.687;5.687;5.6086;5.6086;5.6022;5.5053;5.4973 -;-;-;-;-;-;-;-;-;- 4806 1 2.359 86997.6 1.0 5695 4290 9985 DOHH2_400M_050219_2,9987 DOHH2_400M_050219_2,9987,DSDGSFFLY True True DSDGSFFLY 58.476818 1050.44133299589 3942311.5 9985.0 nc|ENSG00000211896|P01857|IGHG1;;nc|ENSG00000211892|P01861-1|IGHG4;;nc|ENSG00000211893|P01859|IGHG2;;nc|ENSG00000211897|P01860-1|IGHG3;;nc|ENSG00000211893|P01859-1|IGHG2;;nc|ENSG00000211892|P01861|IGHG4;;nc|ENSG00000211897|P01860|IGHG3;;nc|ENSG00000211896|P01857-1|IGHG1 8.068708260854086 1.0 True 9.0 False nc_isoform PXD020620_cell_line DOHH2_400M_050219_2 9989 58.485 196.0 137070.0 25 0 2924.6 -1 0 78 1061.800707995892 0 1061.800707995892 PEAK CID FTMS 0 0 0 -1 0 1 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.32946 0.0 0.0 961.6457752673716 1009.8623751276 1971.508150394972 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.32946 - 4 + 1 2.359 25293.0 1.0 5696 4291 9988 DOHH2_400M_050219_2,9989 DOHH2_400M_050219_2,9989, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9990 58.489 173.0 135680.0 25 0 3537.6 -1 0 69 1018.6401187098162 0 1018.753405749798 PEAK CID FTMS 0 0 0 9988 47348.3125 0.6635140742297793 1 -0.022613525390625 2 2 H 1 -1 1.9897 0.0 0.0 0.097761 0.0 0.0 1041.1347773592822 854.0595797174436 1895.1943570767253 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.097761 - 1 + 1 2.359 23179.5 1.0 5697 4291 9988 DOHH2_400M_050219_2,9990 DOHH2_400M_050219_2,9990, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9991 58.499 584.0 133410.0 25 0 22970.0 -1 0 97 1115.864184558392 0 1115.864184558392 PEAK CID FTMS 0 0 0 -1 0 3 2 {I|L} 1 -1 6.9897 0.0 0.0 0.31348 0.0 0.0 1694.4479603259654 419.1581209772094 2113.606081303175 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.31348 - 13 + 1 2.359 51912.5 1.0 5698 4291 9988 DOHH2_400M_050219_2,9991 DOHH2_400M_050219_2,9991, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9993 58.515 800.0 65964.0 25 0 4540.8 -1 0 112 956.9729492068292 0 956.9729492068292 PEAK CID FTMS 0 0 0 -1 0 1 2 A 1 -1 4.6041 0.0 0.0 0.24081 0.0 0.0 1705.824776121863 132.04619775943596 1837.8709738812984 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.24081 - 73 + 1 2.359 44554.9 0.4000000059604645 5699 4292 9992 DOHH2_400M_050219_2,9993 DOHH2_400M_050219_2,9993, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 9994 58.529 800.0 369560.0 25 0 17073.0 + -1 CCFCCCWAQRR 11 242 832.3115163682183 0 832.2667114138603 PEAK CID FTMS 0 0 0 9992 11530.982421875 1.0 0 0.0 2 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))FC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))WAQRR_ REV__ENST00000373874.6_1_20:35220052-35220253:+|nuORF 0.0 0.4761840153648598 2 QGY{M(Oxidation (M))|F} 4 -1 15.433 0.0 0.0 0.92824 0.0 0.0 1032.3306610549928 132.04627405338127 1164.376935108374 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QGY{M(Oxidation (M))|F} 0.92824 - 1405 + 1 2.359 186631.6 0.3600000143051147 5700 4292 9992 DOHH2_400M_050219_2,9994 DOHH2_400M_050219_2,9994,CCFCCCWAQRR False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 9995 58.543 800.0 35343.0 25 0 729.53 + -1 CYPRHCRCFFE 11 81 816.3390991091728 0 816.3390991091728 PEAK CID FTMS 0 0 0 -1 0 3 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))YPRHC(Carbamidomethyl (C))RC(Carbamidomethyl (C))FFE_ REV__ENSG00000175697|ENST00000464295|GPR156;REV__nc|ENSG00000175697|Q8NFN8-2|GPR156 0.3506318815782774 0.47618401536486 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.359 28826.1 0.3499999940395355 5701 4292 9992 DOHH2_400M_050219_2,9995 DOHH2_400M_050219_2,9995,CYPRHCRCFFE False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 10017 58.64 800.0 11634.0 25 0 583.23 -1 0 29 1104.5712094905448 0 1104.505175769329 PEAK CID FTMS 0 0 0 -1 0 1 2 D 1 -1 4.6041 0.0 0.0 0.2086 0.0 0.0 1034.5860702488646 1054.4809054010375 2089.0669756499024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.2086 - 1 + 1 2.359 18189.8 0.3799999952316284 5702 4313 10016 DOHH2_400M_050219_2,10017 DOHH2_400M_050219_2,10017, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10033 58.712 800.0 72932.0 25 0 1110.8 -1 0 100 978.5867187380792 0 978.5867187380792 PEAK CID FTMS 0 0 0 -1 0 1 2 T 1 -1 5.4846 0.0 0.0 0.28052 0.0 0.0 1628.9982838122924 222.0898836725219 1851.0881674848144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.28052 - 10 + 1 2.362 40814.9 0.3100000023841858 5703 4328 10032 DOHH2_400M_050219_2,10033 DOHH2_400M_050219_2,10033, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10034 58.726 800.0 59982.0 25 0 2477.6 -1 0 103 1098.289355456829 0 1098.289355456829 PEAK CID FTMS 0 0 0 -1 0 2 2 G 1 -1 6.9897 0.0 0.0 0.3185 0.0 0.0 1912.4309009997928 222.09006677799064 2134.5209677777834 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.3185 - 11 + 1 2.362 36379.3 0.3199999928474426 5704 4328 10032 DOHH2_400M_050219_2,10034 DOHH2_400M_050219_2,10034, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10036 58.735 228.0 149550.0 25 0 2671.6 + 29177 QGCPPQPMKH 10 89 1122.5171818518832 1121.5099053852832 1 1123.657885730267 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _QGCPPQPMKH_ REV__ENST00000492001.1_1_7:44796309-44796525:+|nuORF 1.4819007175156935 0.719781833666733 2 R 1 -1 4.6041 0.0 0.0 0.41053 0.0 0.0 351.7619328284457 610.6131075494749 962.3750403779206 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.41053 - 5 + 1 2.362 24461.6 1.0 5705 4329 10035 DOHH2_400M_050219_2,10036 DOHH2_400M_050219_2,10036,QGCPPQPMKH False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 10037 58.739 209.0 53431.0 25 0 3371.2 -1 0 33 1034.358413574813 0 1034.491503894329 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.362 15078.3 1.0 5706 4329 10035 DOHH2_400M_050219_2,10037 DOHH2_400M_050219_2,10037, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10038 58.753 800.0 53559.0 25 0 4333.0 -1 0 101 944.7189853344196 0 944.7018310427666 PEAK CID FTMS 0 0 0 -1 0 3 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.37033 0.0 0.0 1605.290252307708 132.04583154849846 1737.3360838562064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.37033 - 30 + 1 2.362 32913.8 0.5099999904632568 5707 4329 10035 DOHH2_400M_050219_2,10038 DOHH2_400M_050219_2,10038, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10042 58.777 800.0 8489.7 25 0 559.49 -1 0 25 963.5417507320376 0 963.7605468630792 PEAK CID FTMS 0 0 0 10041 10999.494140625 1.0 0 0.0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.362 18232.9 0.3400000035762787 5708 4332 10041 DOHH2_400M_050219_2,10042 DOHH2_400M_050219_2,10042, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10047 58.801 369.0 98088.0 25 0 1801.5 -1 0 92 1179.716479480267 0 1179.716479480267 PEAK CID FTMS 0 0 0 -1 0 1 2 V 1 -1 0.3786 0.0 0.0 0.01606 0.0 0.0 1194.2169422595591 1061.1021212213502 2255.3190634809093 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.01606 - 4 + 1 2.362 30309.9 1.0 5709 4336 10046 DOHH2_400M_050219_2,10047 DOHH2_400M_050219_2,10047, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10048 58.808 423.0 10876.0 25 0 1348.7 -1 0 15 971.3361083865166 0 971.3361083865166 PEAK CID FTMS 0 0 0 -1 0 2 2 K 1 -1 6.9897 0.0 0.0 0.36017 0.0 0.0 1290.3647694079957 519.1859835260374 1809.550752934033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.36017 - 1 + 1 2.362 16328.3 1.0 5710 4336 10046 DOHH2_400M_050219_2,10048 DOHH2_400M_050219_2,10048, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10055 58.84 393.0 63555.0 25 0 1686.4 -1 0 71 1019.3562375623796 0 1019.213366687298 PEAK CID FTMS 0 0 0 10054 227457.078125 1.0 0 0.0 1 2 S 1 -1 4.6041 0.0 0.0 0.22606 0.0 0.0 1179.2979110605029 767.3543795221311 1946.6522905826337 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.22606 - 4 + 1 2.362 27690.0 1.0 5711 4342 10054 DOHH2_400M_050219_2,10055 DOHH2_400M_050219_2,10055, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10056 58.843 144.0 121230.0 25 0 3747.6 -1 0 54 989.0744198344862 0 988.7668945193292 PEAK CID FTMS 0 0 0 -1 0 2 2 E 1 -1 3.0989 0.0 0.0 0.15682 0.0 0.0 1052.0533063664348 792.0150850885374 1844.068391454972 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15682 - 6 + 1 2.362 21292.0 1.0 5712 4342 10054 DOHH2_400M_050219_2,10056 DOHH2_400M_050219_2,10056, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10057 58.848 299.0 63346.0 25 0 2134.4 -1 0 51 1180.714526355267 0 1180.714526355267 PEAK CID FTMS 0 0 0 -1 0 3 2 GW 2 -1 5.9691 0.0 0.0 0.25299 0.0 0.0 1551.7187122790904 561.5717257135374 2113.290437992628 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GW 0.25299 - 3 + 1 2.362 22366.7 1.0 5713 4342 10054 DOHH2_400M_050219_2,10057 DOHH2_400M_050219_2,10057, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10058 58.853 224.0 49299.0 25 0 3570.6 -1 0 34 1016.987109363079 0 1016.987109363079 PEAK CID FTMS 0 0 0 -1 0 4 2 A 1 -1 5.4846 0.0 0.0 0.26991 0.0 0.0 1806.8479389636595 151.05217920474846 1957.900118168408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.26991 - 2 + 1 2.362 18291.1 1.0 5714 4342 10054 DOHH2_400M_050219_2,10058 DOHH2_400M_050219_2,10058, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10059 58.859 378.0 82537.0 25 0 4829.5 -1 0 83 944.1345092654228 0 944.1345092654228 PEAK CID FTMS 0 0 0 -1 0 5 2 W 1 -1 0.48455 0.0 0.0 0.025688 0.0 0.0 958.3450550525268 738.8236178033811 1697.168672855908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.025688 - 2 + 1 2.362 27698.4 1.0 5715 4342 10054 DOHH2_400M_050219_2,10059 DOHH2_400M_050219_2,10059, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10060 58.868 494.0 50878.0 25 0 1493.1 -1 0 75 1061.213549792767 0 1061.213549792767 PEAK CID FTMS 0 0 0 -1 0 6 2 G 1 -1 4.6041 0.0 0.0 0.21713 0.0 0.0 832.2215809314342 1228.1450899713502 2060.3666709027843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21713 - 5 + 1 2.362 24820.8 1.0 5716 4342 10054 DOHH2_400M_050219_2,10060 DOHH2_400M_050219_2,10060, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10062 58.886 800.0 116240.0 25 0 7175.1 + 10793 FYQILWKRWLW 11 166 819.9483021959453 0 819.8490478396416 PEAK CID FTMS 0 0 0 10061 13840.232421875 1.0 0 0.0 1 Unmodified _FYQILWKRWLW_ REV__ENST00000356721.3_1_16:48396017-48396254:-|nuORF 0.3506318815782774 0.47618401536486 2 A 1 -1 4.6041 0.0 0.0 0.2811 0.0 0.0 1431.775955122556 132.04599939517814 1563.8219545177342 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.2811 - 63 + 1 2.362 62226.3 0.5099999904632568 5717 4343 10061 DOHH2_400M_050219_2,10062 DOHH2_400M_050219_2,10062,FYQILWKRWLW False False False False reverse PXD020620_cell_line DOHH2_400M_050219_2 10065 58.897 293.0 130920.0 25 0 7904.6 -1 0 96 858.8192053234795 0 858.7640258669853 PEAK CID FTMS 0 0 0 -1 0 1 2 A 1 -1 4.6041 0.0 0.0 0.26836 0.0 0.0 1509.5172578375857 132.0458925836547 1641.5631504212402 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.26836 - 39 + 1 2.362 30242.0 1.0 5718 4345 10064 DOHH2_400M_050219_2,10065 DOHH2_400M_050219_2,10065, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10066 58.911 800.0 30812.0 25 0 712.3 -1 0 69 1123.3450708315468 0 1123.793505847454 PEAK CID FTMS 0 0 0 -1 0 2 2 A 1 -1 6.9897 0.0 0.0 0.31139 0.0 0.0 2019.5639992296967 151.05176721744377 2170.6157664471407 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.31139 - 6 + 1 2.362 25884.5 0.7900000214576721 5719 4345 10064 DOHH2_400M_050219_2,10066 DOHH2_400M_050219_2,10066, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10070 58.934 704.0 67880.0 25 0 3602.5 -1 0 120 943.0803688171812 0 942.9139282107352 PEAK CID FTMS 0 0 0 10069 33073.0546875 0.7749275613552438 -1 0.0039138793945312 1 2 S 1 -1 6.9897 0.0 0.0 0.37097 0.0 0.0 1662.0446660017465 132.04624353580314 1794.0909095375496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.37097 - 17 + 1 2.362 35393.8 1.0 5720 4348 10069 DOHH2_400M_050219_2,10070 DOHH2_400M_050219_2,10070, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10071 58.938 195.0 93001.0 25 0 7975.6 -1 0 50 863.170112159164 0 863.1120483279228 PEAK CID FTMS 0 0 0 10069 21686.068359375 0.3852434723220515 -1 0.0039138793945312 2 2 {I|L} 1 -1 3.0989 0.0 0.0 0.17972 0.0 0.0 1056.587159277509 551.6313570611936 1608.2185163387026 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.17972 - 2 + 1 2.362 21918.1 1.0 5721 4348 10069 DOHH2_400M_050219_2,10071 DOHH2_400M_050219_2,10071, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10075 58.962 800.0 81100.0 25 0 4944.4 -1 0 128 900.4453186533268 0 900.0751220583916 PEAK CID FTMS 0 0 0 10074 32763.75390625 0.6426787257285468 -2 0.0081291198730468 1 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.38856 0.0 0.0 1516.742857910366 132.0461825006469 1648.7890404110128 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.38856 - 46 + 1 2.367 45358.4 0.3400000035762787 5722 4351 10074 DOHH2_400M_050219_2,10075 DOHH2_400M_050219_2,10075, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10076 58.976 800.0 38813.0 25 0 968.45 -1 0 83 1112.0156327225482 0 1111.648120105267 PEAK CID FTMS 0 0 0 10074 32978.43359375 0.5029231269440104 1 -0.0298538208007812 2 2 H 1 -1 3.4949 0.0 0.0 0.15728 0.0 0.0 1517.5965597792776 564.3522432916624 2081.94880307094 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.15728 - 7 + 1 2.367 27527.8 0.3499999940395355 5723 4351 10074 DOHH2_400M_050219_2,10076 DOHH2_400M_050219_2,10076, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10080 58.993 391.0 186360.0 25 0 22360.0 -1 0 66 1163.796108745367 5813.944161393836 5 1164.389453113079 MULTI CID FTMS 0 0 0 10079 31210.03515625 0.1758440317382344 -7 0.0686798095703125 1 2 A 1 -1 5.4846 0.0 0.0 0.094334 0.0 0.0 4751.36574450106 988.526010381506 5739.891754882567 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.094334 - 7 + 1 2.367 49474.6 1.0 5724 4354 10079 DOHH2_400M_050219_2,10080 DOHH2_400M_050219_2,10080, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10081 59.007 800.0 32923.0 25 0 739.12 -1 0 72 1083.652521839119 0 1084.079150378704 PEAK CID FTMS 0 0 0 10079 21163.095703125 0.7075822112131436 -2 0.0082168579101562 2 2 C 1 -1 2.7642 0.0 0.0 0.12766 0.0 0.0 1274.13870959445 785.1102388971311 2059.248948491581 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.12766 - 2 + 1 2.367 27609.6 0.3300000131130218 5725 4354 10079 DOHH2_400M_050219_2,10081 DOHH2_400M_050219_2,10081, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10088 59.044 800.0 123660.0 25 0 7564.8 -1 0 157 886.3490439015166 0 886.0883666872978 PEAK CID FTMS 0 0 0 10087 29412.0546875 0.6577080654751584 1 -0.0425376892089843 1 2 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.39475 0.0 0.0 1488.5492708090892 132.0461825006469 1620.595453309736 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.39475 - 60 + 1 2.367 67989.2 0.3000000119209289 5726 4360 10087 DOHH2_400M_050219_2,10088 DOHH2_400M_050219_2,10088, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10089 59.058 800.0 137360.0 25 0 10046.0 + 45313 YSGVLITL 8 121 865.5032609370377 864.4959844704376 1 865.5029174685478 MULTI CID FTMS 0 0 0 10087 117772.78125 0.2787943559206042 -24 0.2387428283691406 2 Unmodified _YSGVLITL_ ENSG00000221978|ENST00000400809|CCNL2;nc|ENSG00000221978|Q96S94-2|CCNL2;nc|ENSG00000221978|Q96S94-4|CCNL2;nc|ENSG00000221978|Q96S94-5|CCNL2 109.62928328672726 0.0469763173861337 2 [{I|L}T]AAY{I|L}T{I|L} 8 5 + 63.339 0.0 0.0 7.3267 7.3267 81.037 0.0 0.0 0.0 0.8994806169435066 14.904630595263413 0.8994806169435066 0.8994806169435066 0 0.7742275032520141 1.3979400086720375 1.524227503252014 0.0 [{I|L}T]AAY{I|L}T{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y{I|L}T{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}{I|L}T{I|L};{[{M(Oxidation (M))|F}C]|[YS]}GV{I|L}{I|L}T{I|L};[{I|L}T]AA{I|L}YT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}YT{I|L};[{I|L}T]AAYT{I|L}{I|L};{[{M(Oxidation (M))|F}C]|[YS]}G{I|L}V{I|L}T{I|L};[YG]SV{I|L}{I|L}T{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}YT{I|L}{I|L} 7.3267;7.2227;6.7594;6.3889;6.2902;6.1861;5.8843;5.837;5.837;5.7803 -;-;-;+;-;-;-;-;-;- + 1405 1 2.367 76973.6 0.9399999976158142 5727 4360 10087 DOHH2_400M_050219_2,10089 DOHH2_400M_050219_2,10089,YSGVLITL True True YSGVLITL 59.057743 865.502917468548 1482504.25 10087.0 nc|ENSG00000221978|Q96S94-4|CCNL2;;nc|ENSG00000221978|Q96S94-2|CCNL2;;nc|ENSG00000221978|Q96S94-5|CCNL2;;ENSG00000221978|ENST00000400809|CCNL2 1.954732020696004 1.0 True 8.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 10090 59.07 706.0 25661.0 25 0 680.81 -1 0 60 999.7108642458916 0 999.7108642458916 PEAK CID FTMS 0 0 0 -1 0 3 2 R 1 -1 2.2185 0.0 0.0 0.11107 0.0 0.0 998.4824451892456 839.8228243463499 1838.305269535596 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.11107 - 2 + 1 2.367 26707.1 1.0 5728 4360 10087 DOHH2_400M_050219_2,10090 DOHH2_400M_050219_2,10090, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10094 59.094 800.0 20167.0 25 0 2366.4 -1 0 47 986.3058959841728 0 986.3058959841728 PEAK CID FTMS 0 0 0 -1 0 1 2 T 1 -1 3.4949 0.0 0.0 0.17735 0.0 0.0 966.4546741931518 900.0557345025999 1866.510408695752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.17735 - 2 + 1 2.367 22597.1 0.699999988079071 5729 4363 10093 DOHH2_400M_050219_2,10094 DOHH2_400M_050219_2,10094, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10101 59.131 800.0 55485.0 25 0 828.23 -1 0 90 914.6318393946312 0 914.5082275271416 PEAK CID FTMS 0 0 0 10100 17149.154296875 0.6696839063912555 1 -0.0300483703613281 1 2 D 1 -1 5.4846 0.0 0.0 0.30015 0.0 0.0 783.5383847445372 925.6814669244748 1709.219851669012 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.30015 - 24 + 1 2.367 33807.0 0.3499999940395355 5730 4369 10100 DOHH2_400M_050219_2,10101 DOHH2_400M_050219_2,10101, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10102 59.145 800.0 6565.8 25 0 1170.7 -1 0 14 1084.2509240396048 0 1084.647875964642 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.367 15323.3 0.2800000011920929 5731 4369 10100 DOHH2_400M_050219_2,10102 DOHH2_400M_050219_2,10102, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10119 59.219 654.0 11020.0 25 0 770.2 -1 0 26 949.4964477419852 0 949.4964477419852 PEAK CID FTMS 0 0 0 -1 0 1 2 C(Carbamidomethyl (C)) 1 -1 4.6041 0.0 0.0 0.24271 0.0 0.0 803.8943104236206 930.0344332330686 1733.9287436566892 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.24271 - 1 + 1 2.367 14101.7 1.0 5732 4385 10118 DOHH2_400M_050219_2,10119 DOHH2_400M_050219_2,10119, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10133 59.284 800.0 30365.0 25 0 2611.5 -1 0 64 928.4441997010484 0 928.7650024294852 PEAK CID FTMS 0 0 0 10132 13457.51171875 0.5782217571624139 -1 0.0038909912109375 1 2 T 1 -1 3.4949 0.0 0.0 0.18841 0.0 0.0 755.8982127792466 994.9020479791624 1750.800260758409 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.18841 - 2 + 1 2.367 25915.4 0.3300000131130218 5733 4398 10132 DOHH2_400M_050219_2,10133 DOHH2_400M_050219_2,10133, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10137 59.298 176.0 93665.0 25 0 3611.9 -1 0 47 996.5284301638604 0 996.5284301638604 PEAK CID FTMS 0 0 0 -1 0 1 2 E 1 -1 6.9897 0.0 0.0 0.35106 0.0 0.0 794.8595203845581 1064.1417178241254 1859.001238208684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.35106 - 2 + 1 2.367 19461.0 1.0 5734 4401 10136 DOHH2_400M_050219_2,10137 DOHH2_400M_050219_2,10137, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10138 59.3 121.0 25519.0 25 0 5757.9 -1 0 9 922.0926391482352 0 922.0926391482352 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.367 15724.2 1.0 5735 4401 10136 DOHH2_400M_050219_2,10138 DOHH2_400M_050219_2,10138, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10139 59.306 290.0 13195.0 25 0 1452.5 -1 0 12 1094.025927722454 0 1094.025927722454 PEAK CID FTMS 0 0 0 -1 0 3 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.367 16224.1 1.0 5736 4401 10136 DOHH2_400M_050219_2,10139 DOHH2_400M_050219_2,10139, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10147 59.346 800.0 22550.0 25 0 2240.4 -1 0 44 817.2820643286343 0 817.2826415896416 PEAK CID FTMS 0 0 0 10146 7293.17822265625 0.0989773041010733 1 -0.0302352905273437 1 2 A 1 -1 5.4846 0.0 0.0 0.33595 0.0 0.0 1426.4430368830513 132.0460604303344 1558.4890973133856 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.33595 - 6 + 1 2.367 19677.0 0.3100000023841858 5737 4408 10146 DOHH2_400M_050219_2,10147 DOHH2_400M_050219_2,10147, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10148 59.36 800.0 31948.0 25 0 2414.8 -1 0 68 857.6652084784029 0 857.3815185427666 PEAK CID FTMS 0 0 0 10146 9681.93359375 0.5539196591614333 1 -0.0302352905273437 2 2 S 1 -1 0.9691 0.0 0.0 0.056563 0.0 0.0 1507.2100270868852 116.05130182437732 1623.2613289112626 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.056563 - 2 + 1 2.367 27777.9 0.3199999928474426 5738 4408 10146 DOHH2_400M_050219_2,10148 DOHH2_400M_050219_2,10148, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10152 59.379 474.0 6341.9 25 0 870.33 -1 0 11 1134.355639636517 0 1134.355639636517 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.367 15004.5 1.0 5739 4411 10151 DOHH2_400M_050219_2,10152 DOHH2_400M_050219_2,10152, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10156 59.403 800.0 7750.9 25 0 675.13 -1 0 20 1058.357104480267 0 1058.357104480267 PEAK CID FTMS 0 0 0 -1 0 1 2 S 1 -1 5.4846 0.0 0.0 0.25935 0.0 0.0 1418.2697987048716 606.3830660455686 2024.65286475044 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.25935 - 1 + 1 2.367 14176.4 0.4300000071525574 5740 4414 10155 DOHH2_400M_050219_2,10156 DOHH2_400M_050219_2,10156, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10161 59.429 658.0 52841.0 25 0 1021.3 -1 0 96 999.564501941204 0 999.564501941204 PEAK CID FTMS 0 0 0 -1 0 1 2 A 1 -1 4.6041 0.0 0.0 0.23054 0.0 0.0 1700.9634327380736 222.08936487369377 1923.052797611768 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.23054 - 15 + 1 2.367 32905.6 1.0 5741 4418 10160 DOHH2_400M_050219_2,10161 DOHH2_400M_050219_2,10161, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10162 59.443 800.0 44639.0 25 0 713.03 -1 RRRTCCWRCWR 11 86 848.4044677615166 0 848.4044677615166 PEAK CID FTMS 0 0 0 -1 0 2 2 Carbamidomethyl (C) _RRRTC(Carbamidomethyl (C))C(Carbamidomethyl (C))WRCWR_ ENST00000375224.1_1_1:19430583-19430625:-|nuORF 0.0 0.4761840153648598 2 Q 1 -1 2.4743 0.0 0.0 0.14599 0.0 0.0 861.9602283923706 701.7530001275999 1563.7132285199705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.14599 - 1 + 1 2.367 34196.4 0.2899999916553497 5742 4418 10160 DOHH2_400M_050219_2,10162 DOHH2_400M_050219_2,10162,RRRTCCWRCWR False False False False nuORF PXD020620_cell_line DOHH2_400M_050219_2 10165 59.464 800.0 25212.0 25 0 670.66 -1 0 66 915.8656494021416 0 915.8656494021416 PEAK CID FTMS 0 0 0 -1 0 1 2 C 1 -1 3.4949 0.0 0.0 0.191 0.0 0.0 997.4657825915892 726.2099703424436 1723.675752934033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.191 - 8 + 1 2.367 20207.5 0.2800000011920929 5743 4420 10164 DOHH2_400M_050219_2,10165 DOHH2_400M_050219_2,10165, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10168 59.474 209.0 268270.0 25 0 111620.0 + 20617 LLPPPIAPL 9 53 930.6026385526184 929.5953620860182 1 930.6022216677666 MULTI CID FTMS 0 0 0 10167 124323.0 0.135344012155846 -63 0.4442367553710937 1 Unmodified _LLPPPIAPL_ ENSG00000136378|ENST00000388820|ADAMTS7 9.347437153973935 0.588369872918737 2 PP 2 7 10.969 0.0 0.0 1.18 0.0 0.0 226.16784803634303 506.2992107473522 732.4670587836953 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + PP 1.18 + + 5 + 1 2.367 44593.1 1.0 5744 4422 10167 DOHH2_400M_050219_2,10168 DOHH2_400M_050219_2,10168,LLPPPIAPL False True LLPPPIAPL 59.474228 930.602221667767 2776982.0 10167.0 ENSG00000136378|ENST00000388820|ADAMTS7 2.717672427495321 1.0 True 9.0 False self_gene PXD020620_cell_line DOHH2_400M_050219_2 10169 59.484 538.0 147460.0 25 0 11470.0 + + 27230 ASSPGILIL 9 113 870.5298176657429 869.5225411991429 1 870.5295898318291 MULTI CID FTMS 0 0 0 10167 76532.515625 0.2061309779520093 12 -0.0603790283203125 2 Unmodified _PGLSSALLL_ ENSG00000129675|ENST00000250617|ARHGEF6;nc|ENSG00000129675|Q15052-2|ARHGEF6 44.40701690623563 0.0526327925666318 2 [PG]{I|L}S{[SA]|[TG]}{I|L}{I|L}{I|L} 9 -1 + 41.749 0.0 0.0 4.8014 4.8014 78.544 0.0 0.0 0.0 2.632192780232785 17.74395259621769 2.632192780232785 6.064921830680696 0 0.0 0.0 1.4916440611282626 0.0 [PG]{I|L}S{[SA]|[TG]}{I|L}{I|L}{I|L};[PG]{I|L}A{[CA]|SS}{I|L}{I|L}{I|L};{I|L}{I|L}[PG]S{[SA]|[TG]}{I|L}{I|L};[PG]S{I|L}{[SA]|[TG]}{I|L}{I|L}{I|L};{I|L}{I|L}[PG]A{[CA]|SS}{I|L}{I|L};[PG]{I|L}S{I|L}{[SA]|[TG]}{I|L}{I|L};[PG]{I|L}{I|L}S{[SA]|[TG]}{I|L}{I|L};[QP]{I|L}{[CA]|SS}{I|L}{I|L}{I|L};[PS]G{I|L}{[SA]|[TG]}{I|L}{I|L}{I|L};[PG]{I|L}{I|L}A{[CA]|SS}{I|L}{I|L} 4.8014;4.1039;3.765;3.7628;3.5969;3.5597;3.5546;3.5026;3.4488;3.3865 +;-;-;-;-;-;-;-;-;- + 688 1 2.367 55396.8 1.0 5745 4422 10167 DOHH2_400M_050219_2,10169 DOHH2_400M_050219_2,10169,PGLSSALLL False False ASSPGILIL 59.483714 870.529589831829 1098742.375 10167.0 ENSG00000129675|ENST00000250617|ARHGEF6;;nc|ENSG00000129675|Q15052-2|ARHGEF6 2.1327326397101083 1.0 False 9.0 True self_gene PXD020620_cell_line DOHH2_400M_050219_2 10185 59.553 600.0 40771.0 25 0 3249.6 -1 0 62 934.0212641634052 0 934.051318347454 PEAK CID FTMS 0 0 0 -1 0 1 2 S 1 -1 3.9794 0.0 0.0 0.21326 0.0 0.0 1643.9263956590382 132.04575525455314 1775.9721509135911 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.21326 - 3 + 1 2.367 25086.1 1.0 5746 4437 10184 DOHH2_400M_050219_2,10185 DOHH2_400M_050219_2,10185, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10198 59.614 800.0 6159.9 25 0 699.35 -1 0 14 1169.641894519329 0 1169.641894519329 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.367 13459.8 0.2599999904632568 5747 4449 10197 DOHH2_400M_050219_2,10198 DOHH2_400M_050219_2,10198, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10202 59.638 800.0 68893.0 25 0 4917.1 -1 0 110 879.9792601696197 0 879.5725585818291 PEAK CID FTMS 0 0 0 -1 0 1 2 S 1 -1 6.9897 0.0 0.0 0.39761 0.0 0.0 1535.8434710454908 132.0457705133422 1667.889241558833 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.39761 - 45 + 1 2.372 41929.5 0.9900000095367432 5748 4452 10201 DOHH2_400M_050219_2,10202 DOHH2_400M_050219_2,10202, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10203 59.639 82.0 65286.0 25 0 6193.4 -1 0 19 965.8216801918524 0 965.539599597454 PEAK CID FTMS 0 0 0 -1 0 2 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.372 17582.5 1.0 5749 4452 10201 DOHH2_400M_050219_2,10203 DOHH2_400M_050219_2,10203, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10205 59.655 800.0 49711.0 25 0 804.72 -1 0 104 1057.4839287092743 0 1057.565356433392 PEAK CID FTMS 0 0 0 10204 43540.16796875 0.6638742685269287 1 -0.0302734375 1 2 GG 2 -1 5.0886 0.0 0.0 0.24083 0.0 0.0 1830.815347797652 165.06757532291252 1995.8829231205643 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GG 0.24083 - 7 + 1 2.372 31546.4 0.8199999928474426 5750 4453 10204 DOHH2_400M_050219_2,10205 DOHH2_400M_050219_2,10205, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10206 59.669 800.0 36880.0 25 0 917.19 -1 0 71 1013.182910144329 0 1013.182910144329 PEAK CID FTMS 0 0 0 -1 0 2 2 R 1 -1 2.2185 0.0 0.0 0.10959 0.0 0.0 918.3197254626828 946.9054659479124 1865.2251914105952 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.10959 - 2 + 1 2.372 25853.4 0.6399999856948853 5751 4453 10204 DOHH2_400M_050219_2,10206 DOHH2_400M_050219_2,10206, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10240 59.804 236.0 25352.0 25 0 2097.3 -1 0 17 953.5732299685478 0 953.5732299685478 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.372 13547.2 1.0 5752 4486 10239 DOHH2_400M_050219_2,10240 DOHH2_400M_050219_2,10240, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10241 59.815 594.0 13942.0 25 0 876.11 -1 0 29 1027.164843738079 0 1027.164843738079 PEAK CID FTMS 0 0 0 -1 0 2 2 P 1 -1 5.4846 0.0 0.0 0.26724 0.0 0.0 1569.4504932849488 382.7996004693969 1952.2500937543457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.26724 - 1 + 1 2.372 18394.2 1.0 5753 4486 10239 DOHH2_400M_050219_2,10241 DOHH2_400M_050219_2,10241, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10245 59.835 525.0 18742.0 25 0 1088.5 -1 0 30 1118.015917956829 0 1118.015917956829 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.372 16291.9 1.0 5754 4489 10244 DOHH2_400M_050219_2,10245 DOHH2_400M_050219_2,10245, False False False False unknown PXD020620_cell_line DOHH2_400M_050219_2 10255 59.875 322.0 36723.0 25 0 4416.4 -1 0 32 840.7607299685478 0 840.7607299685478 PEAK CID FTMS 0 0 0 -1 0 1 2 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.372 17170.8 1.0 5755 4498 10254 DOHH2_400M_050219_2,10255 DOHH2_400M_050219_2,10255, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12 0.056414 753.0 69166.0 25 0 46753.0 3451 CERERERER 9 36 631.8022949099541 0 631.8022949099541 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 0.92 44981.3 1.0 0 10 11 HBL1_DMSO_200M_050219_1,12 HBL1_DMSO_200M_050219_1,12,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 143 0.58576 800.0 58052.0 25 0 28821.0 -1 0 57 490.3894836306572 0 490.3894836306572 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.437 47180.2 0.4300000071525574 1 140 142 HBL1_DMSO_200M_050219_1,143 HBL1_DMSO_200M_050219_1,143, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 146 0.60617 800.0 63492.0 25 0 44605.0 + -1 CFWKFQSFL 9 30 631.8032929776896 0 631.8039428591728 PEAK CID FTMS 0 0 0 145 77664.640625 0.5753301251051571 35 -0.1509822607040405 1 Carbamidomethyl (C) _C(Carbamidomethyl (C))FWKFQSFL_ REV__ENST00000420283.2_1_6:116573500-116573923:-|nuORF 0.6014990680409731 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.459 45145.5 0.4000000059604645 2 142 145 HBL1_DMSO_200M_050219_1,146 HBL1_DMSO_200M_050219_1,146,CFWKFQSFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 229 0.94348 800.0 65415.0 25 0 45717.0 + 6686 ECEEKLERVQ 10 27 631.8032216127585 0 631.8038207888603 PEAK CID FTMS 0 0 0 228 72036.234375 0.5329874434072397 -134 0.5564151704311371 1 Unmodified _ECEEKLERVQ_ REV__ENSG00000134318|ENST00000315872|ROCK2 1.3295316138638542 0.3961065659209837 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.524 47613.0 0.4600000083446502 3 224 228 HBL1_DMSO_200M_050219_1,229 HBL1_DMSO_200M_050219_1,229,ECEEKLERVQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 321 1.3162 800.0 75260.0 25 0 53525.0 6688 ECIFKCMLYL 10 39 631.8032216127585 0 631.8027831912041 PEAK CID FTMS 0 0 0 320 96910.9140625 0.7170322098673774 -43 0.1701803207397461 1 Unmodified _ECIFKCMLYL_ ENSG00000214842|ENST00000399080|RAD51AP2 1.6526216038709556 0.3961065659209837 3 D 1 10 2.4743 0.0 0.0 0.19612 0.0 0.0 853.767379649542 289.7670992486938 1143.534478898236 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.19612 - 4 + 1 1.57 49908.3 0.5199999809265137 4 315 320 HBL1_DMSO_200M_050219_1,321 HBL1_DMSO_200M_050219_1,321,ECIFKCMLYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 523 2.1171 488.0 95446.0 25 0 66057.0 44477 YNRYYNWAL 9 27 631.8032980980815 0 631.8038207888603 PEAK CID FTMS 0 0 0 522 115905.2109375 0.4041103423975147 -279 1.114884912967682 1 Unmodified _YNRYYNWAL_ ENSG00000101577|ENST00000677752|LPIN2 0.6014990680409731 0.3444685223463735 3 C 1 9 3.0989 0.0 0.0 0.24564 0.0 0.0 917.5588839385474 238.00152002506096 1155.5604039636085 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.24564 - 2 + 1 1.658 40353.7 1.0 5 516 522 HBL1_DMSO_200M_050219_1,523 HBL1_DMSO_200M_050219_1,523,YNRYYNWAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 579 2.3458 800.0 58893.0 25 0 28766.0 -1 0 59 490.389335584766 0 490.3896057009697 PEAK CID FTMS 0 0 0 578 102878.9375 0.7780746391291097 -144 0.5743651390075684 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.663 43147.8 0.4900000095367431 6 571 578 HBL1_DMSO_200M_050219_1,579 HBL1_DMSO_200M_050219_1,579, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 592 2.4055 800.0 92477.0 25 0 66299.0 6689 ECIFKCMLYL 10 35 631.8032980980815 0 631.8027831912041 PEAK CID FTMS 0 0 0 591 164053.34375 0.5719816423958587 -212 0.855330228805542 1 Unmodified _ECIFKCMLYL_ ENSG00000214842|ENST00000399080|RAD51AP2 1.6526216038709556 0.3961065659209837 3 S 1 10 3.0989 0.0 0.0 0.24564 0.0 0.0 774.7259981963599 396.8032930963501 1171.52929129271 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.24564 - 1 + 1 1.672 59154.2 0.550000011920929 7 583 591 HBL1_DMSO_200M_050219_1,592 HBL1_DMSO_200M_050219_1,592,ECIFKCMLYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 662 2.6903 800.0 102770.0 25 0 76373.0 + -1 HIEMFRVCI 9 34 631.8032980980815 0 631.8035156130791 PEAK CID FTMS 0 0 0 661 187267.703125 0.6529198732112863 -143 0.5956008434295654 1 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))HIEM(Oxidation (M))FRVC(Carbamidomethyl (C))I_ REV__ENST00000258534.12_1_12:102315336-102315390:+|nuORF 2.302733041254933 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.69 67492.3 0.6600000262260437 8 652 661 HBL1_DMSO_200M_050219_1,662 HBL1_DMSO_200M_050219_1,662,HIEMFRVCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 691 2.8126 800.0 61817.0 25 0 32409.0 -1 0 49 490.389335584766 0 490.3896972537041 PEAK CID FTMS 0 0 0 690 101411.6875 0.7669778097682681 -35 0.1500780582427978 1 3 S 1 -1 1.42 0.0 0.0 0.14508 0.0 0.0 743.6964435310571 145.01429163150627 888.7107351625633 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.14508 - 1 + 1 1.69 44225.9 0.5 9 680 690 HBL1_DMSO_200M_050219_1,691 HBL1_DMSO_200M_050219_1,691, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 770 3.1318 800.0 128070.0 25 0 94261.0 7040 EELENELHHL 10 42 631.8032980980815 0 631.8030273318291 PEAK CID FTMS 0 0 0 769 219583.78125 0.7655917823550485 -37 0.1453864574432373 1 Unmodified _EELENELHHL_ ENSG00000115355|ENST00000436346|CCDC88A;nc|ENSG00000115355|Q3V6T2-2|CCDC88A;nc|ENSG00000115355|Q3V6T2-3|CCDC88A;nc|ENSG00000115355|Q3V6T2-4|CCDC88A;nc|ENSG00000115355|Q3V6T2-5|CCDC88A 1.844237919475145 0.3961065659209837 3 C(Carbamidomethyl (C)) 1 10 2.7642 0.0 0.0 0.2191 0.0 0.0 774.727493557688 323.80344568424067 1098.5309392419288 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.2191 - 2 + 1 1.7 83038.4 0.699999988079071 10 758 769 HBL1_DMSO_200M_050219_1,770 HBL1_DMSO_200M_050219_1,770,EELENELHHL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 848 3.4483 800.0 62610.0 25 0 29339.0 -1 0 69 490.389335584766 0 490.3893310427666 PEAK CID FTMS 0 0 0 847 96040.3203125 0.726354095258736 120 -0.4995095729827881 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.708 45742.5 0.449999988079071 11 835 847 HBL1_DMSO_200M_050219_1,848 HBL1_DMSO_200M_050219_1,848, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 955 3.8802 800.0 59696.0 25 0 29650.0 -1 0 61 490.389487811527 489.382211344927 1 490.3889953494072 MULTI CID FTMS 0 0 0 954 95405.703125 0.7555278606826356 29 -0.1389825344085693 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.792 42374.5 0.4300000071525574 12 941 954 HBL1_DMSO_200M_050219_1,955 HBL1_DMSO_200M_050219_1,955, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 979 3.9833 800.0 78058.0 25 0 57251.0 + 13923 HWHHPRHQQ 9 31 631.8033376743643 0 631.8032104372978 PEAK CID FTMS 0 0 0 978 92146.8359375 0.2423397727181202 -967 1 Unmodified _HWHHPRHQQ_ REV__ENST00000441094.5_1_3:9792033-9793586:+|nuORF 0.6014990680409731 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.807 52300.1 0.5199999809265137 13 964 978 HBL1_DMSO_200M_050219_1,979 HBL1_DMSO_200M_050219_1,979,HWHHPRHQQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 1088 4.4217 800.0 57532.0 25 0 29702.0 -1 0 54 490.38930252321546 0 490.3896362185478 PEAK CID FTMS 0 0 0 1087 66617.8046875 0.5234711753731286 -180 0.7353849411010742 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.863 39980.7 0.4799999892711639 14 1072 1087 HBL1_DMSO_200M_050219_1,1088 HBL1_DMSO_200M_050219_1,1088, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 1166 4.7366 800.0 62792.0 25 0 39738.0 + -1 CSQRKECIY 9 33 614.7765396067864 0 614.7756835818291 PEAK CID FTMS 0 0 0 1165 83807.7890625 0.8821959591706497 38 -0.1668906211853027 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))CSQRKEC(Carbamidomethyl (C))IY_ REV__ENST00000589345.6_1_19:15962923-15965568:-|nuORF 0.5247636613948944 0.3444685223463735 3 {I|L} 1 -1 2.4743 0.0 0.0 0.20156 0.0 0.0 672.5616108524415 438.8653963678344 1111.427007220276 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.20156 + + 1 + 1 1.886 43733.0 0.4600000083446502 15 1149 1165 HBL1_DMSO_200M_050219_1,1166 HBL1_DMSO_200M_050219_1,1166,CSQRKECIY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 1174 4.7695 388.0 123300.0 25 0 85099.0 -1 EIFPVHRAMM 10 29 631.8033376743643 0 631.8032714724541 PEAK CID FTMS 0 0 0 1173 176990.96875 0.4654739438815571 -775 3.186803340911865 1 2 Oxidation (M) _EIFPVHRAM(Oxidation (M))M(Oxidation (M))_ ENSG00000198642|ENST00000359039|KLHL9 1.3295316138638542 0.3961065659209837 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.886 41286.9 1.0 16 1156 1173 HBL1_DMSO_200M_050219_1,1174 HBL1_DMSO_200M_050219_1,1174,EIFPVHRAMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 1306 5.2955 800.0 98500.0 25 0 73119.0 6690 ECIFKCMLYL 10 33 631.8033376743643 0 631.8034545779228 PEAK CID FTMS 0 0 0 1305 153718.734375 0.4042695852977681 -644 2.640981912612915 1 Unmodified _ECIFKCMLYL_ ENSG00000214842|ENST00000399080|RAD51AP2 1.6526216038709556 0.3961065659209837 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.895 63170.6 0.6600000262260437 17 1287 1305 HBL1_DMSO_200M_050219_1,1306 HBL1_DMSO_200M_050219_1,1306,ECIFKCMLYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 1423 5.7628 800.0 69921.0 25 0 36575.0 -1 0 66 490.3893283009713 0 490.3894836306572 PEAK CID FTMS 0 0 0 1422 127194.7734375 0.8962517460220644 -102 0.3998932838439941 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.9 47946.3 0.550000011920929 18 1403 1422 HBL1_DMSO_200M_050219_1,1423 HBL1_DMSO_200M_050219_1,1423, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 1462 5.917 367.0 133920.0 25 0 95423.0 3452 CERERERER 9 22 631.8033376743643 0 631.8035156130791 PEAK CID FTMS 0 0 0 1461 184357.984375 0.4848486828404104 -490 1.9922001361846924 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.899 45581.7 1.0 19 1441 1461 HBL1_DMSO_200M_050219_1,1462 HBL1_DMSO_200M_050219_1,1462,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 1496 6.0586 800.0 66911.0 25 0 36183.0 -1 0 60 490.3893283009713 0 490.3893005251884 PEAK CID FTMS 0 0 0 1495 74983.734375 0.5283574241348115 -31 0.1213698387145996 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.898 47153.8 0.4900000095367431 20 1474 1495 HBL1_DMSO_200M_050219_1,1496 HBL1_DMSO_200M_050219_1,1496, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 1534 6.2095 410.0 134810.0 25 0 98762.0 3453 CERERERER 9 24 631.8033376743643 0 631.8044311404228 PEAK CID FTMS 0 0 0 1533 166419.296875 0.4376711817641935 -420 1.7070107460021973 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.897 51828.7 1.0 21 1511 1533 HBL1_DMSO_200M_050219_1,1534 HBL1_DMSO_200M_050219_1,1534,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 1557 6.3031 501.0 125260.0 25 0 26537.0 + -1 GCCFCCCC 8 66 376.0951196661977 0 376.0934020876884 PEAK CID FTMS 0 0 0 1556 105613.40625 0.7436378156695747 -140 0.584388256072998 1 5 Carbamidomethyl (C) _GC(Carbamidomethyl (C))C(Carbamidomethyl (C))FC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C_ REV__ENSG00000163793|ENST00000296097|DNAJC5G 0.0 0.6010389664953673 3 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.53046 0.0 0.0 228.0344643306392 372.0466097467407 600.0810740773799 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.53046 + + 1 + 1 1.897 59879.2 1.0 22 1533 1556 HBL1_DMSO_200M_050219_1,1557 HBL1_DMSO_200M_050219_1,1557,GCCFCCCC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 1613 6.5233 336.0 156360.0 25 0 110400.0 3454 CERERERER 9 32 631.8033376743643 0 631.8032714724541 PEAK CID FTMS 0 0 0 1612 259007.6875 0.6811722126147575 -343 1.4003725051879885 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.897 45994.3 1.0 23 1588 1612 HBL1_DMSO_200M_050219_1,1613 HBL1_DMSO_200M_050219_1,1613,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 1656 6.7007 800.0 64240.0 25 0 32580.0 -1 0 63 490.3895885074651 489.3823120408651 1 490.3898498415947 MULTI CID FTMS 0 0 0 1655 94956.203125 0.7228671619718301 18 -0.0831184387207031 1 3 {I|L} 1 -1 11.783 0.0 0.0 2.4077 0.0 0.0 358.2874461734807 0.0 358.2874461734807 0.0 4.820011733642405 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.4077 - 4 + 1 1.894 43564.7 0.4699999988079071 24 1630 1655 HBL1_DMSO_200M_050219_1,1656 HBL1_DMSO_200M_050219_1,1656, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 1958 7.894 800.0 159040.0 25 0 119170.0 6691 ECIFKCMLYL 10 41 631.8033376743643 0 631.8036376833916 PEAK CID FTMS 0 0 0 1957 380238.1875 1.0 0 0.0 1 Unmodified _ECIFKCMLYL_ ENSG00000214842|ENST00000399080|RAD51AP2 1.6526216038709556 0.3961065659209837 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.879 97108.4 0.9100000262260436 25 1931 1957 HBL1_DMSO_200M_050219_1,1958 HBL1_DMSO_200M_050219_1,1958,ECIFKCMLYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 1982 7.9964 800.0 134190.0 25 0 12254.0 10840 GAAKPRKPAG 10 134 318.1945596745286 951.5618496237856 3 318.1943847537041 MULTI CID FTMS 0 0 0 1981 63799.0234375 0.0756044560650877 -155 0.6197652816772461 1 Unmodified _GAAKPRKPAG_ ENSG00000124575|ENST00000244534|H1-3 10.073929032068715 0.6785112666868882 3 Q 1 10 18.029 0.0 0.0 1.8947 0.0 0.0 805.4924354165577 0.0 805.4924354165577 0.0 4.534021960761265 0.0 0.0 0 0.5 0.0 0.0 0.2059771852360797 Q 1.8947 - 45 + 1 1.879 89920.7 0.5199999809265137 26 1954 1981 HBL1_DMSO_200M_050219_1,1982 HBL1_DMSO_200M_050219_1,1982,GAAKPRKPAG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 1983 8.0046 460.0 131950.0 25 0 26108.0 -1 SPTCRRRCCPL 11 79 488.23402123698463 1461.680234311154 3 488.2345764040947 MULTI CID FTMS 0 0 0 1981 94471.4453125 1.0 0 0.0 2 3 Carbamidomethyl (C) _SPTC(Carbamidomethyl (C))RRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))PL_ ENST00000331808.4_1_16:11035747-11036047:-|nuORF 9.243775137331635 0.8315352019864206 3 SP 2 -1 38.201 0.0 0.0 2.6135 0.0 0.0 0.0 1274.572694251606 1274.572694251606 26.60728139283883 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 SP 2.6135 + + 62 + 1 1.879 55631.3 1.0 27 1954 1981 HBL1_DMSO_200M_050219_1,1983 HBL1_DMSO_200M_050219_1,1983,SPTCRRRCCPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 1990 8.0406 800.0 104600.0 25 0 25767.0 -1 RMEMRRYEED 10 85 477.5435949390431 1429.6089554173293 3 477.8771850466728 MULTI CID FTMS 0 0 0 1989 43643.33984375 0.5576776079215243 -2 0.0078601837158203 1 Oxidation (M) _RMEM(Oxidation (M))RRYEED_ ENSG00000056097|ENST00000265069|ZFR 5.40270961882225 0.7016457984575614 3 SGN 3 -1 26.198 0.0 0.0 1.8325 0.0 0.0 1153.4983033139097 0.0 1153.4983033139097 0.0 11.532125137753436 0.0 0.0 0 0.0 0.0 0.0 0.0 SGN 1.8325 - 85 1 1.892 67814.0 0.4699999988079071 28 1960 1989 HBL1_DMSO_200M_050219_1,1990 HBL1_DMSO_200M_050219_1,1990,RMEMRRYEED False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 1998 8.0808 800.0 89262.0 25 0 5655.5 + 34664 SPQSHRNASHQ 11 95 416.86557912275686 1247.5749079684706 3 416.8653137087822 MULTI CID FTMS 0 0 0 1997 83113.4765625 0.4404355799738633 -26 0.1352205276489257 1 Unmodified _SPQSHRNASHQ_ ENSG00000225614|ENST00000565624|ZNF469 28.49450938151212 0.4231428536161201 3 SP[DN]P 5 8 44.922 0.0 0.0 3.6007 0.0 0.0 0.0 734.3327907226757 734.3327907226757 23.46787486224656 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 1.0 SP[DN]P 3.6007 - 264 + 1 1.892 63037.7 0.5199999809265137 29 1967 1997 HBL1_DMSO_200M_050219_1,1998 HBL1_DMSO_200M_050219_1,1998,SPQSHRNASHQ False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2011 8.1405 800.0 93829.0 25 0 7928.0 -1 SPWSQKEARCQ 11 107 459.55184909008017 1375.6337178704405 3 459.5523864626884 MULTI CID FTMS 0 0 0 2010 66089.0703125 0.4787462366806026 -12 0.0597705841064453 1 Carbamidomethyl (C) _SPWSQKEARC(Carbamidomethyl (C))Q_ ENST00000445415.1_1_X:133677862-133678851:-|nuORF 16.274544907608252 0.6966175468278786 3 SP 2 -1 37.959 0.0 0.0 2.7594 0.0 0.0 0.0 1188.5325804799554 1188.5325804799554 21.84955642535897 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 SP 2.7594 + + 188 + 1 1.899 64232.1 0.4699999988079071 30 1979 2010 HBL1_DMSO_200M_050219_1,2011 HBL1_DMSO_200M_050219_1,2011,SPWSQKEARCQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 2030 8.2187 486.0 136480.0 25 0 101880.0 3455 CERERERER 9 26 631.8034435140944 0 631.8036376833916 PEAK CID FTMS 0 0 0 2029 207488.640625 0.3200670721842823 -51 0.2588381767272949 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.899 54339.7 1.0 31 1997 2029 HBL1_DMSO_200M_050219_1,2030 HBL1_DMSO_200M_050219_1,2030,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 2036 8.2411 215.0 330790.0 25 0 17861.0 + 28890 QAPKPRKQ 8 104 318.1945596745286 951.5618496237856 3 318.1942932009697 MULTI CID FTMS 0 0 0 2035 302282.5625 0.3582172184525987 -107 0.4979839324951172 1 Unmodified _QAPKPRKQ_ ENSG00000161634|ENST00000293371|DCD;nc|ENSG00000161634|P81605-2|DCD 24.67388899826682 0.525179942228231 3 [QA]PKQ 5 3 32.535 0.0 0.0 3.4192 0.0 0.0 0.0 396.23594080142817 396.23594080142817 12.86003154388904 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.805462187404089 [QA]PKQ 3.4192 - 74 + 1 1.899 60250.2 1.0 32 2002 2035 HBL1_DMSO_200M_050219_1,2036 HBL1_DMSO_200M_050219_1,2036,QAPKPRKQ False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2040 8.2653 800.0 28971.0 25 0 18294.0 -1 KTWFCECNQ 9 21 636.7586064370666 0 636.7578002810478 PEAK CID FTMS 0 0 0 2039 114161.390625 0.7802612614844673 4 -0.0282602310180664 1 2 Carbamidomethyl (C) _KTWFC(Carbamidomethyl (C))EC(Carbamidomethyl (C))NQ_ ENSG00000112200|ENST00000370706|ZNF451;ENST00000444273.6_1_6:56954967-57015704:+|nuORF;nc|ENSG00000112200|Q9Y4E5-2|ZNF451 0.6014990680409731 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.899 24424.0 0.5199999809265137 33 2005 2039 HBL1_DMSO_200M_050219_1,2040 HBL1_DMSO_200M_050219_1,2040,KTWFCECNQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2055 8.3326 800.0 66679.0 25 0 3627.2 + 34665 SPQSHRNASHQ 11 93 416.86557912275686 1247.5749079684706 3 416.8655883669853 MULTI CID FTMS 0 0 0 2054 59679.671875 0.3162549803237932 26 -0.1257143020629882 1 Unmodified _SPQSHRNASHQ_ ENSG00000225614|ENST00000565624|ZNF469 24.99096001346401 0.505407273373304 3 SP[DN]P 5 8 44.922 0.0 0.0 3.6007 0.0 0.0 0.0 734.3307888872454 734.3307888872454 23.68832586775445 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 1.0 SP[DN]P 3.6007 - 76 + 1 1.909 46808.9 0.449999988079071 34 2019 2054 HBL1_DMSO_200M_050219_1,2055 HBL1_DMSO_200M_050219_1,2055,SPQSHRNASHQ False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2068 8.391 725.0 95819.0 25 0 4365.5 -1 SPWSQKEARCQ 11 101 459.55184909008017 1375.6337178704405 3 459.5516845583916 MULTI CID FTMS 0 0 0 2067 83041.890625 0.6015517003882194 40 -0.1732397079467773 1 Carbamidomethyl (C) _SPWSQKEARC(Carbamidomethyl (C))Q_ ENST00000445415.1_1_X:133677862-133678851:-|nuORF 16.274544907608252 0.6966175468278786 3 SP 2 -1 40.846 0.0 0.0 2.9693 0.0 0.0 0.0 1188.527668776377 1188.527668776377 25.02722335607532 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 SP 2.9693 + + 163 + 1 1.914 55636.1 1.0 35 2031 2067 HBL1_DMSO_200M_050219_1,2068 HBL1_DMSO_200M_050219_1,2068,SPWSQKEARCQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 2095 8.4981 354.0 360600.0 25 0 20864.0 + 28891 QAPKPRKQ 8 142 318.1945596745286 951.5618496237856 3 318.1940795779228 MULTI CID FTMS 0 0 0 2094 291617.625 0.3455788306652753 -52 0.2402467727661132 1 Unmodified _QAPKPRKQ_ ENSG00000161634|ENST00000293371|DCD;nc|ENSG00000161634|P81605-2|DCD 44.40701690623563 0.1655546087385432 3 QAPKP[RK]Q 8 0 + 51.624 0.0 0.0 5.4252 5.4252 84.822 0.0 0.0 0.0 34.686142858300855 2.1509245670370944 2.1509245670370944 8.981931759908548 0 0.0629529932484498 0.8538719643217619 0.0 1.1643943297944483 + + QAPKP[RK]Q;QAPKQ[RK]P;QAPK[AG][RK]P;QAQ[KP][RK]P 5.4252;4.4813;3.5079;1.8794 +;-;-;- + 156 + 1 1.914 107235.6 1.0 36 2057 2094 HBL1_DMSO_200M_050219_1,2095 HBL1_DMSO_200M_050219_1,2095,QAPKPRKQ False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2115 8.5853 800.0 62052.0 25 0 3614.8 + 34666 SPQSHRNASHQ 11 83 416.8654748168984 1247.5745950508951 3 416.8656188845634 MULTI CID FTMS 0 0 0 2114 76687.9375 0.539865982444336 -26 0.1074352264404296 1 Unmodified _SPQSHRNASHQ_ ENSG00000225614|ENST00000565624|ZNF469 24.99096001346401 0.505407273373304 3 SP[DN]P 5 8 45.234 0.0 0.0 3.6257 0.0 0.0 0.0 734.3341740852678 734.3341740852678 24.02249673628745 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 1.0 SP[DN]P 3.6257 - 110 + 1 1.918 43883.7 0.4699999988079071 37 2076 2114 HBL1_DMSO_200M_050219_1,2115 HBL1_DMSO_200M_050219_1,2115,SPQSHRNASHQ False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2128 8.6417 609.0 101330.0 25 0 4323.8 -1 SPWSQKEARCQ 11 96 459.5516497208153 1375.633119762646 3 459.5515319705009 MULTI CID FTMS 0 0 0 2127 116762.234375 0.3444594714815875 -21 0.0951080322265625 1 Carbamidomethyl (C) _SPWSQKEARC(Carbamidomethyl (C))Q_ ENST00000445415.1_1_X:133677862-133678851:-|nuORF 12.227587767072771 0.7807987299068186 3 SP 2 -1 39.085 0.0 0.0 2.8412 0.0 0.0 0.0 1188.5282302349228 1188.5282302349228 5.717026860951805 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 SP 2.8412 + + 392 + 1 1.918 50666.5 1.0 38 2088 2127 HBL1_DMSO_200M_050219_1,2128 HBL1_DMSO_200M_050219_1,2128,SPWSQKEARCQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 2144 8.713 800.0 79519.0 25 0 3689.7 + -1 FWMMYKTHFRW 11 76 550.2556748052097 1647.7451950158288 3 550.5903198122978 MULTI CID FTMS 0 0 0 2143 80044.9453125 0.2505406340439867 -12 0.047093391418457 1 Oxidation (M) _FWM(Oxidation (M))MYKTHFRW_ REV__ENSG00000088038|ENST00000221232|CNOT3 1.214830529360525 0.8694162858786273 3 QQSAD 5 -1 45.037 0.0 0.0 2.7333 0.0 0.0 1100.521681175083 0.0 1100.521681175083 0.0 2.078343878162343 0.0 0.0 0 0.7302046884880937 0.0 0.5 0.3807196863200844 QQSAD 2.7333 - 111 1 1.918 53138.9 0.4399999976158142 39 2103 2143 HBL1_DMSO_200M_050219_1,2144 HBL1_DMSO_200M_050219_1,2144,FWMMYKTHFRW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 2148 8.7338 602.0 61091.0 25 0 2347.0 + 45219 YQYYFWSMQKW 11 66 543.9091258452438 1628.7055481359312 3 543.9083129763603 MULTI CID FTMS 0 0 0 2147 85196.0703125 0.6012820730543776 1 -0.0268783569335937 1 Unmodified _YQYYFWSMQKW_ REV__ENSG00000165389|ENST00000298130|SPTSSA 4.11662792887243 0.8557254166428417 3 W[MT]HQQSW 8 -1 44.29 0.0 0.0 2.7193 0.0 0.0 526.2503529279312 0.0 526.2503529279312 0.0 28.80510344348764 0.0 0.0 0 0.3807196863200844 0.0 0.9247425010840048 0.0 W[MT]HQQSW 2.7193 - 56 1 1.918 37836.6 1.0 40 2106 2147 HBL1_DMSO_200M_050219_1,2148 HBL1_DMSO_200M_050219_1,2148,YQYYFWSMQKW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 2149 8.7476 800.0 90329.0 25 0 49382.0 + 29152 QFHRFNWWHAS 11 66 505.9068676869867 0 505.9060241580009 PEAK CID FTMS 0 0 0 2147 148654.390625 0.2065576154450927 -1593 6.62657642364502 2 Unmodified _QFHRFNWWHAS_ REV__ENSG00000221968|ENST00000278829|FADS3;REV__ENST00000414624.6_1_11:61645294-61658904:-|nuORF 1.214830529360525 0.4761840153648598 3 Q 1 -1 5.4846 0.0 0.0 0.54313 0.0 0.0 341.0010389854984 537.7163790338499 878.7174180193483 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.54313 + + 5 + 1 1.918 61798.4 0.5899999737739563 41 2106 2147 HBL1_DMSO_200M_050219_1,2149 HBL1_DMSO_200M_050219_1,2149,QFHRFNWWHAS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 2151 8.7524 69.0 951300.0 25 0 70667.0 + 28892 QAPKPRKQ 8 85 318.1945596745286 951.5618496237856 3 318.1941406130791 MULTI CID FTMS 0 0 0 2150 727036.0 0.8615674403478154 -2 0.0308303833007812 1 Unmodified _QAPKPRKQ_ ENSG00000161634|ENST00000293371|DCD;nc|ENSG00000161634|P81605-2|DCD 46.92087301778293 0.1537303740847981 3 [QA]PK[KS]SPG 9 5 38.086 0.0 0.0 4.0024 0.0 0.0 0.0 68.05134760074452 68.05134760074452 22.486655626297114 0.0 0.0 0.0 0 0.2302046884880938 0.958607314841775 0.0 0.8494850021680094 [QA]PK[KS]SPG 4.0024 - 178 + 1 1.918 57855.1 1.0 42 2107 2150 HBL1_DMSO_200M_050219_1,2151 HBL1_DMSO_200M_050219_1,2151,QAPKPRKQ False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2152 8.7599 401.0 174010.0 25 0 57705.0 + -1 SPYRHGRRQCM 11 85 488.5627710856002 1462.666483857001 3 488.5625488162041 MULTI CID FTMS 0 0 0 2150 115284.2421875 0.4240795218705088 -11 0.0784635543823242 2 Carbamidomethyl (C),Oxidation (M) _SPYRHGRRQC(Carbamidomethyl (C))M(Oxidation (M))_ REV__ENST00000599056.5_1_19:53573505-53577466:-|nuORF 7.0370850670814 0.8419465095438622 3 SP 2 -1 36.331 0.0 0.0 2.4839 0.0 0.0 0.0 1275.559429159304 1275.559429159304 16.608710759894606 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 SP 2.4839 + + 194 + 1 1.918 61860.6 1.0 43 2107 2150 HBL1_DMSO_200M_050219_1,2152 HBL1_DMSO_200M_050219_1,2152,SPYRHGRRQCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 2155 8.7801 800.0 157550.0 25 0 38465.0 + + -1 SPGERHGSRHQQSAD 15 99 412.94357389397607 1647.7451897095043 4 413.1938964724541 MULTI CID FTMS 0 0 0 2154 93801.4453125 0.4339416557258894 -12 0.0907135009765625 1 Oxidation (M) _FWM(Oxidation (M))MYKTHFRW_ P20930;ENSG00000143631|ENST00000368799|FLG 0.4082653385326392 0.873221713011348 3 SPSW 4 -1 38.849 0.0 0.0 2.3577 0.0 0.0 1172.5499597253515 0.0 1172.5499597253515 0.0 18.364627099206658 0.0 0.0 0 0.2887254899964357 0.0 1.305462187404089 0.0 SPSW 2.3577 - 121 1 1.93 102643.2 0.4600000083446502 44 2109 2154 HBL1_DMSO_200M_050219_1,2155 HBL1_DMSO_200M_050219_1,2155,FWMMYKTHFRW False False SPGERHGSRHQQSAD 8.7801456 413.193896472454 7298808.0 2154.0 P20930;;ENSG00000143631|ENST00000368799|FLG 7.086477120717366 4.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2161 8.8122 800.0 39704.0 25 0 1869.6 -1 0 69 454.21965068473503 1812.84949687254 4 454.2201721072197 MULTI CID FTMS 0 0 0 2160 52016.0859375 0.5899996738991349 1 -0.0301494598388671 1 3 H{M(Oxidation (M))|F}QH 4 -1 24.768 0.0 0.0 1.3662 0.0 0.0 0.0 1260.5953883570037 1260.5953883570037 5.475898734766513 0.0 0.0 0.0 0 0.4322333069283655 0.0 0.0 0.4247425010840047 H{M(Oxidation (M))|F}QH 1.3662 - 40 + 1 1.93 38983.9 0.4799999892711639 45 2114 2160 HBL1_DMSO_200M_050219_1,2161 HBL1_DMSO_200M_050219_1,2161, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2162 8.826 800.0 109230.0 25 0 7261.9 + -1 QAPKPRKQ 8 97 476.7129605896554 1902.8227364922216 4 476.9625732302666 MULTI CID FTMS 0 0 0 2160 79267.6796875 0.6312016945080406 -10 0.0828332901000976 2 nc|ENSG00000161634|P81605-2|DCD;ENSG00000161634|ENST00000293371|DCD 3 GA[YV]P[R{M(Oxidation (M))|F}]QD[DN] 11 -1 23.46 0.0 0.0 1.2329 0.0 0.0 622.2417469709 0.0 622.2417469709 0.0 4.3033353767473095 0.0 0.0 0 0.0 0.0 0.5 0.0 GA[YV]P[R{M(Oxidation (M))|F}]QD[DN] 1.2329 - 123 1 1.93 79586.5 0.4699999988079071 46 2114 2160 HBL1_DMSO_200M_050219_1,2162 HBL1_DMSO_200M_050219_1,2162, False False QAPKPRKQ 8.8259849 476.962573230267 24547359.125 2160.0 nc|ENSG00000161634|P81605-2|DCD;;ENSG00000161634|ENST00000293371|DCD 2.443619112173716 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2176 8.8894 800.0 73843.0 25 0 4054.9 -1 0 92 384.1887710260867 383.18149455948674 1 384.1875488162041 MULTI CID FTMS 0 0 0 2175 19341.4921875 0.2741154233723078 1 -0.0163145065307617 1 3 EVH 3 -1 + 24.896 0.0 0.0 6.4971 6.4971 78.467 0.0 0.0 0.0 0.6706931641401326 8.239087409443183 0.6706931641401326 0.6706931641401326 0 0.25 0.0 0.0 0.0 EVH;[HD]{I|L};D{I|L}H;EHV;[HV]E;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F};[PG][NP] 6.4971;6.3221;5.4838;4.3469;3.8871;2.063;0.79288 -;-;-;-;-;-;- 23 + 1 1.938 56671.9 0.4000000059604645 47 2127 2175 HBL1_DMSO_200M_050219_1,2176 HBL1_DMSO_200M_050219_1,2176, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2178 8.8989 394.0 129270.0 25 0 5693.5 + 17453 KNTDYTELHQQ 11 85 459.5516497208153 1375.633119762646 3 459.5515624880791 MULTI CID FTMS 0 0 0 2177 67135.0546875 0.1980546670704606 19 -0.0837326049804687 1 Unmodified _KNTDYTELHQQ_ ENSG00000066455|ENST00000163416|GOLGA5;nc|ENSG00000066455|Q8TBA6-2|GOLGA5 19.986897341741983 0.6193965116009005 3 SP 2 11 40.846 0.0 0.0 2.9693 0.0 0.0 0.0 1188.5236512176843 1188.5236512176843 13.546553904100932 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 SP 2.9693 - 219 + 1 1.938 46178.7 1.0 48 2128 2177 HBL1_DMSO_200M_050219_1,2178 HBL1_DMSO_200M_050219_1,2178,KNTDYTELHQQ False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2193 8.9574 259.0 133700.0 25 0 4325.1 + -1 CRYCQLMRLYW 11 65 550.2556748052097 1647.7451950158288 3 550.2561523318291 MULTI CID FTMS 0 0 0 2192 159003.90625 0.3964174806153264 27 -0.1509475708007812 1 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))RYC(Carbamidomethyl (C))QLMRLYW_ REV__ENSG00000119403|ENST00000373896|PHF19;REV__ENST00000474402.5_1_9:123628304-123631123:-|nuORF 1.3296431237094175 0.8688745925763601 3 SW 2 -1 22.959 0.0 0.0 1.3933 0.0 0.0 1356.637996094301 0.0 1356.637996094301 0.0 8.354706403678875 0.0 0.0 0 0.0 0.0 0.5 0.0 SW 1.3933 - 10 1 1.947 33036.0 1.0 49 2142 2192 HBL1_DMSO_200M_050219_1,2193 HBL1_DMSO_200M_050219_1,2193,CRYCQLMRLYW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 2207 9.0133 345.0 282790.0 25 0 14073.0 + 28893 QAPKPRKQ 8 129 318.1945596745286 951.5618496237856 3 318.1939880251884 MULTI CID FTMS 0 0 0 2206 163369.984375 0.193600123333138 46 -0.2225503921508789 1 Unmodified _QAPKPRKQ_ ENSG00000161634|ENST00000293371|DCD;nc|ENSG00000161634|P81605-2|DCD 12.531546534597751 0.7257836412119636 3 [QA]PKQ 5 3 29.688 0.0 0.0 3.1199 0.0 0.0 0.0 396.2385042779906 396.2385042779906 16.416550240937763 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 0.4247425010840047 [QA]PKQ 3.1199 - 85 + 1 1.955 81821.5 1.0 50 2155 2206 HBL1_DMSO_200M_050219_1,2207 HBL1_DMSO_200M_050219_1,2207,QAPKPRKQ False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2212 9.0412 800.0 90229.0 25 0 26017.0 + -1 KCYFWLWLCLC 11 78 412.94357389397607 1647.7451897095043 4 412.9431335330009 MULTI CID FTMS 0 0 0 2211 40774.08984375 0.1644347555131549 33 -0.1666278839111328 1 3 Carbamidomethyl (C) _KC(Carbamidomethyl (C))YFWLWLC(Carbamidomethyl (C))LC(Carbamidomethyl (C))_ REV__nc|ENSG00000162897|Q8WWV6-2|FCAMR 0.4545168274142398 0.8730034954726786 3 DSW 3 -1 29.609 0.0 0.0 1.797 0.0 0.0 1241.6133114652605 0.0 1241.6133114652605 0.0 9.877203139966326 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 DSW 1.797 - 33 1 1.955 62493.8 0.449999988079071 51 2159 2211 HBL1_DMSO_200M_050219_1,2212 HBL1_DMSO_200M_050219_1,2212,KCYFWLWLCLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 2215 9.0614 800.0 137100.0 25 0 85685.0 -1 QDYEGRYCIFN 11 71 488.8798513204288 0 488.8799621462822 PEAK CID FTMS 0 0 0 2214 80359.5078125 0.7383311074330999 10 -0.0639791488647461 1 Carbamidomethyl (C) _QDYEGRYC(Carbamidomethyl (C))IFN_ ENSG00000171115|ENST00000307271|GIMAP8 1.1097533296519684 0.4761840153648598 3 SP 2 -1 10.969 0.0 0.0 1.1242 0.0 0.0 54.30473330316392 734.336037156659 788.640770459823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SP 1.1242 - 17 + 1 1.955 88470.8 0.4799999892711639 52 2161 2214 HBL1_DMSO_200M_050219_1,2215 HBL1_DMSO_200M_050219_1,2215,QDYEGRYCIFN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2218 9.0816 800.0 52764.0 25 0 3720.7 -1 0 77 476.7129605896554 1902.8227364922216 4 476.7124511599541 MULTI CID FTMS 0 0 0 2217 40688.93359375 0.334919116474887 25 -0.1104145050048828 1 3 D 1 -1 16.99 0.0 0.0 0.89287 0.0 0.0 1769.7847859080402 0.0 1769.7847859080402 0.0 -9.208187539523747 -9.208187539523747 0.0 0 0.0 0.0 0.0 0.0 D 0.89287 - 43 + 1 1.955 43990.3 0.4699999988079071 53 2163 2217 HBL1_DMSO_200M_050219_1,2218 HBL1_DMSO_200M_050219_1,2218, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2291 9.3772 800.0 109580.0 25 0 71427.0 -1 TFSLERTCCYQ 11 57 488.8798513204288 0 488.8795959353447 PEAK CID FTMS 0 0 0 2290 75397.125 0.6927374782883208 84 -0.3681707382202148 1 2 Carbamidomethyl (C) _TFSLERTC(Carbamidomethyl (C))C(Carbamidomethyl (C))YQ_ ENSG00000012171|ENST00000616701|SEMA3B;nc|ENSG00000012171|Q13214-2|SEMA3B 0.4545168274142398 0.4761840153648598 3 G 1 -1 6.9897 0.0 0.0 0.71634 0.0 0.0 557.7577524755551 357.94089685611567 915.6986493316708 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.71634 - 3 + 1 1.964 76901.7 0.449999988079071 54 2235 2290 HBL1_DMSO_200M_050219_1,2291 HBL1_DMSO_200M_050219_1,2291,TFSLERTCCYQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2319 9.4959 800.0 25979.0 25 0 1805.9 -1 NNEREKMSPWD 11 56 474.54326217123406 0 474.5429565310478 PEAK CID FTMS 0 0 0 2318 50649.625 0.7172582811628583 1 -0.0163784027099609 1 Oxidation (M) _NNEREKM(Oxidation (M))SPWD_ ENSG00000165288|ENST00000373275|BRWD3;ENST00000473691.1_1_X:79938122-79975072:-|nuORF;nc|ENSG00000165288|Q6RI45-2|BRWD3;nc|ENSG00000165288|Q6RI45-3|BRWD3;nc|ENSG00000165288|Q6RI45-4|BRWD3;nc|ENSG00000165288|Q6RI45-5|BRWD3 1.214830529360525 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.964 24005.3 0.4399999976158142 55 2262 2318 HBL1_DMSO_200M_050219_1,2319 HBL1_DMSO_200M_050219_1,2319,NNEREKMSPWD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2356 9.65 800.0 51666.0 25 0 2063.8 -1 0 62 452.4582174524154 1805.8037639432616 4 452.4584228396416 MULTI CID FTMS 0 0 0 2355 19710.71484375 0.1174607656591681 -40 0.1698493957519531 1 3 D 1 -1 13.099 0.0 0.0 0.72538 0.0 0.0 1672.766210087596 0.0 1672.766210087596 0.0 -12.078343878162343 -12.078343878162343 0.0 0 0.0 0.0 0.0 0.0 D 0.72538 - 26 + 1 1.968 40044.9 0.4799999892711639 56 2298 2355 HBL1_DMSO_200M_050219_1,2356 HBL1_DMSO_200M_050219_1,2356, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2418 9.9025 800.0 103290.0 25 0 4948.7 -1 0 91 452.4582174524154 1805.8037639432616 4 452.4580566287041 MULTI CID FTMS 0 0 0 2417 119665.9296875 0.7131172986791451 21 -0.1194238662719726 1 3 H[DN]H{M(Oxidation (M))|F}N 6 -1 25.891 0.0 0.0 1.4337 0.0 0.0 1023.5223152664728 0.0 1023.5223152664728 0.0 3.438265792396248 0.0 0.0 0 0.0 0.0 0.5 0.0 H[DN]H{M(Oxidation (M))|F}N 1.4337 - 106 1 1.973 72442.7 0.5899999737739563 57 2359 2417 HBL1_DMSO_200M_050219_1,2418 HBL1_DMSO_200M_050219_1,2418, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2421 9.9225 800.0 98415.0 25 0 60745.0 -1 VWQCNCKFHW 10 58 488.8800086213456 0 488.8798095583916 PEAK CID FTMS 0 0 0 2420 66420.890625 0.193282446538265 -1293 5.516511917114258 1 2 Carbamidomethyl (C) _VWQC(Carbamidomethyl (C))NC(Carbamidomethyl (C))KFHW_ ENSG00000154764|ENST00000285018|WNT7A;ENSG00000188064|ENST00000339464|WNT7B 0.1593219195374162 0.3961065659209837 3 G 1 -1 6.9897 0.0 0.0 0.71634 0.0 0.0 557.7579919098386 357.9396151178344 915.697607027673 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.71634 - 1 + 1 1.973 67106.8 0.449999988079071 58 2361 2420 HBL1_DMSO_200M_050219_1,2421 HBL1_DMSO_200M_050219_1,2421,VWQCNCKFHW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2425 9.9467 800.0 41276.0 25 0 3676.2 -1 YKCYRKMEED 10 71 474.5434020145584 0 474.5435363650322 PEAK CID FTMS 0 0 0 2424 34475.80859375 0.3819350796563668 -2 0.0078916549682617 1 Carbamidomethyl (C) _YKC(Carbamidomethyl (C))YRKMEED_ ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 3.319642798002388 0.3961065659209838 3 Q 1 -1 6.9897 0.0 0.0 0.73803 0.0 0.0 574.946745580095 241.04741846256096 815.9941640426559 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.73803 - 6 + 1 1.982 30878.7 0.4600000083446502 59 2364 2424 HBL1_DMSO_200M_050219_1,2425 HBL1_DMSO_200M_050219_1,2425,YKCYRKMEED False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2491 10.214 800.0 37539.0 25 0 1780.1 -1 0 55 452.458040584011 1805.803056469644 4 452.7086669802666 MULTI CID FTMS 0 0 0 2490 53777.48046875 0.5785325104439833 44 -0.1862754821777343 1 3 D 1 -1 13.979 0.0 0.0 0.77414 0.0 0.0 1672.765212696986 0.0 1672.765212696986 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.77414 - 22 + 1 1.985 34053.7 0.4699999988079071 60 2429 2490 HBL1_DMSO_200M_050219_1,2491 HBL1_DMSO_200M_050219_1,2491, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2542 10.424 800.0 28398.0 25 0 1805.5 -1 DTDMKYLLYED 11 60 474.5433235179713 1420.608141154114 3 474.5429260134697 MULTI CID FTMS 0 0 0 2541 25591.734375 0.3511018133971968 1 -0.0162773132324218 1 Oxidation (M) _DTDM(Oxidation (M))KYLLYED_ ENSG00000150676|ENST00000342404|CCDC83;nc|ENSG00000150676|Q8IWF9-2|CCDC83;nc|ENSG00000150676|Q8IWF9-3|CCDC83 2.843284757254958 0.8617331327080043 3 D 1 -1 13.099 0.0 0.0 0.92207 0.0 0.0 1287.5703584166124 0.0 1287.5703584166124 0.0 -0.0886438348021556 -0.0886438348021556 0.0 0 0.0 0.0 0.0 0.0 D 0.92207 + + 39 + 1 1.985 25463.9 0.4699999988079071 61 2479 2541 HBL1_DMSO_200M_050219_1,2542 HBL1_DMSO_200M_050219_1,2542,DTDMKYLLYED False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2596 10.645 800.0 32004.0 25 0 3803.7 -1 0 61 468.7203560271221 1870.8523182420888 4 468.7206298708916 MULTI CID FTMS 0 0 0 2595 97360.8828125 1.0 0 0.0 1 3 D 1 -1 12.764 0.0 0.0 0.68227 0.0 0.0 1737.8149322331026 0.0 1737.8149322331026 0.0 0.2899597348884342 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.68227 - 33 + 1 1.992 30373.0 0.449999988079071 62 2532 2595 HBL1_DMSO_200M_050219_1,2596 HBL1_DMSO_200M_050219_1,2596, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2620 10.748 800.0 45137.0 25 0 3317.1 -1 YWRYDERRQMM 11 78 550.5839423813077 1648.729997744123 3 550.5840331912041 MULTI CID FTMS 0 0 0 2619 68800.484375 0.3370464932125398 -54 0.2250738143920898 1 Oxidation (M) _YWRYDERRQM(Oxidation (M))M_ ENSG00000262406|ENST00000571244|MMP12 0.0948413911109767 0.8747004676205551 3 D 1 -1 15.485 0.0 0.0 0.93918 0.0 0.0 1515.6922150066212 0.0 1515.6922150066212 0.0 4.0645667832142784 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.93918 + + 32 + 1 1.992 36527.1 0.4600000083446502 63 2555 2619 HBL1_DMSO_200M_050219_1,2620 HBL1_DMSO_200M_050219_1,2620,YWRYDERRQMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2682 11.001 800.0 90751.0 25 0 3887.4 -1 MEFWFWELQIY 11 108 550.5839423813077 1648.729997744123 3 550.5845214724541 MULTI CID FTMS 0 0 0 2681 167152.828125 0.8188645045435357 7 -0.0400505065917968 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))EFWFWELQIY_ ENST00000238497.9_1_18:61064415-61066538:-|nuORF 0.0948413911109767 0.8747004676205551 3 QQSW 4 -1 47.849 0.0 0.0 2.9022 0.0 0.0 1101.5037311112346 0.0 1101.5037311112346 0.0 29.32019555215044 0.0 0.0 0 0.6307196863200843 0.0 0.3807196863200844 0.8807196863200843 QQSW 2.9022 - 352 1 1.997 61826.3 0.5799999833106995 64 2616 2681 HBL1_DMSO_200M_050219_1,2682 HBL1_DMSO_200M_050219_1,2682,MEFWFWELQIY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 2705 11.1 800.0 23797.0 25 0 1822.2 -1 CDNCCLCPCC 10 48 454.4652388644353 0 454.4643737673759 PEAK CID FTMS 0 0 0 2704 17096.310546875 0.2365252415049572 1 -0.0163202285766601 1 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))DNC(Carbamidomethyl (C))C(Carbamidomethyl (C))LC(Carbamidomethyl (C))PC(Carbamidomethyl (C))C_ ENST00000322177.5_1_15:75247948-75248191:-|nuORF 0.1593219195374162 0.3961065659209837 3 Q 1 -1 1.5938 0.0 0.0 0.17574 0.0 0.0 649.814375578677 126.01983057193594 775.8342061506129 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.17574 - 14 + 1 2.001 24406.0 0.4199999868869781 65 2638 2704 HBL1_DMSO_200M_050219_1,2705 HBL1_DMSO_200M_050219_1,2705,CDNCCLCPCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 2711 11.128 553.0 41714.0 25 0 28879.0 + -1 MMMPQNTMEK 10 21 636.7586498955893 0 636.7587768435478 PEAK CID FTMS 0 0 0 2710 139027.328125 0.6588949476482904 379 -1.8107891082763672 1 2 Oxidation (M) _M(Oxidation (M))M(Oxidation (M))MPQNTMEK_ REV__ENST00000558840.1_1_15:78585533-78588040:-|nuORF 0.4583401331227399 0.3961065659209837 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.001 29912.2 1.0 66 2643 2710 HBL1_DMSO_200M_050219_1,2711 HBL1_DMSO_200M_050219_1,2711,MMMPQNTMEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 2718 11.164 800.0 126900.0 25 0 84061.0 + -1 CWSRYLCCFL 10 60 488.8800086213456 0 488.8788940310478 PEAK CID FTMS 0 0 0 2717 116692.6875 0.3395716004542091 -1005 4.396060466766357 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))WSRYLC(Carbamidomethyl (C))C(Carbamidomethyl (C))FL_ REV__ENSG00000103043|ENST00000261776|VAC14;REV__ENST00000564685.5_1_16:70731013-70778503:-|nuORF;REV__nc|ENSG00000103043|Q08AM6-2|VAC14 0.776531954647913 0.3961065659209837 3 G 1 -1 6.9897 0.0 0.0 0.71634 0.0 0.0 557.7577344951504 357.9409578912719 915.6986923864224 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.71634 - 1 + 1 2.001 82557.7 0.5199999809265137 67 2649 2717 HBL1_DMSO_200M_050219_1,2718 HBL1_DMSO_200M_050219_1,2718,CWSRYLCCFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 2739 11.255 800.0 85849.0 25 0 3056.6 + + -1 SPGERHGSRHQQSAD 15 107 550.5837861673774 1648.729529102332 3 550.9179565310478 MULTI CID FTMS 0 0 0 2738 133409.90625 0.608034639221304 29 -0.1508598327636718 1 Oxidation (M) _M(Oxidation (M))MQRREDYRWY_ P20930;ENSG00000143631|ENST00000368799|FLG 0.0948413911109767 0.8747004676205551 3 [PS][C(Carbamidomethyl (C))M][HD]SPN 9 -1 32.113 0.0 0.0 1.9477 0.0 0.0 0.0 620.2717379205686 620.2717379205686 4.519309113210504 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3494850021680094 [PS][C(Carbamidomethyl (C))M][HD]SPN 1.9477 - 195 + 1 2.001 56583.5 0.6899999976158142 68 2669 2738 HBL1_DMSO_200M_050219_1,2739 HBL1_DMSO_200M_050219_1,2739,MMQRREDYRWY False False SPGERHGSRHQQSAD 11.255203 550.584 0.0 2738.0 P20930;;ENSG00000143631|ENST00000368799|FLG 1.650186051925023 3.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2743 11.279 800.0 55469.0 25 0 2612.9 29105 QEQEDKMWRQ 10 96 459.87978514784936 1376.617526043748 3 459.8792602419853 MULTI CID FTMS 0 0 0 2742 27964.453125 0.3454742768392238 1 -0.0162858963012695 1 Unmodified _QEQEDKMWRQ_ ENSG00000277322|ENST00000619213|GOLGA6L6;ENSG00000277865|ENST00000622895|GOLGA6L22;ENST00000567652.1_3_15:28798864-28806522:+|nuORF;nc|ENSG00000227717|P0DX01|GOLGA6L25;nc|ENSG00000237850|P0DX00|GOLGA6L24 6.2057823575117 0.6979311171683138 3 Q 1 9 15.495 0.0 0.0 1.1256 0.0 0.0 1230.5480202837855 0.0 1230.5480202837855 0.0 1.449761166236181 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 + Q 1.1256 + + 66 + 1 2.005 39442.0 0.4699999988079071 69 2672 2742 HBL1_DMSO_200M_050219_1,2743 HBL1_DMSO_200M_050219_1,2743,QEQEDKMWRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2750 11.315 800.0 65633.0 25 0 6669.2 -1 0 63 610.2842754161901 2437.10799579836 4 610.5349609255791 MULTI CID FTMS 0 0 0 2749 34896.5859375 0.3613507907303872 -16 0.0877866744995117 1 3 [PG]H 3 -1 12.447 0.0 0.0 0.51074 0.0 0.0 0.0 2142.947868716905 2142.947868716905 1.4781748188863748 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 [PG]H 0.51074 - 16 + 1 2.005 49786.9 0.4399999976158142 70 2678 2749 HBL1_DMSO_200M_050219_1,2750 HBL1_DMSO_200M_050219_1,2750, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2775 11.422 800.0 34027.0 25 0 1936.4 -1 0 58 452.7043099852464 1806.7881340745853 4 452.9545471072197 MULTI CID FTMS 0 0 0 2774 51179.12109375 0.2192380451527608 -65 0.3254518508911133 1 3 D 1 -1 13.979 0.0 0.0 0.77372 0.0 0.0 1673.7505497013417 0.0 1673.7505497013417 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.77372 - 36 + 1 2.005 30859.2 0.4300000071525574 71 2702 2774 HBL1_DMSO_200M_050219_1,2775 HBL1_DMSO_200M_050219_1,2775, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2787 11.478 800.0 57704.0 25 0 9519.3 -1 0 72 490.2274830203028 1956.8808262148111 4 490.2282897830009 MULTI CID FTMS 0 0 0 2786 86728.4296875 0.7783866434784755 4 -0.0279474258422851 1 3 RS{[DA]|[EG]}H 5 -1 18.812 0.0 0.0 0.96134 0.0 0.0 1372.613688618911 0.0 1372.613688618911 0.0 4.208187539523749 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 RS{[DA]|[EG]}H 0.96134 - 149 + 1 2.009 46207.2 0.5299999713897705 72 2713 2786 HBL1_DMSO_200M_050219_1,2787 HBL1_DMSO_200M_050219_1,2787, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2793 11.509 800.0 64753.0 25 0 3802.7 -1 MEFWFWELQIY 11 86 550.5837861673774 1648.729529102332 3 550.5837890505791 MULTI CID FTMS 0 0 0 2792 118639.9140625 0.4561855569453421 33 -0.1421947479248047 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))EFWFWELQIY_ ENST00000238497.9_1_18:61064415-61066538:-|nuORF 0.0 0.8751479354844584 3 D 1 -1 17.881 0.0 0.0 1.0845 0.0 0.0 1515.6918073999868 0.0 1515.6918073999868 0.0 8.928643424857873 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 D 1.0845 - 66 + 1 2.009 43888.3 0.5600000023841858 73 2718 2792 HBL1_DMSO_200M_050219_1,2793 HBL1_DMSO_200M_050219_1,2793,MEFWFWELQIY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 2831 11.667 800.0 25347.0 25 0 1580.8 -1 0 47 603.2702057927114 1806.788787978334 3 603.2700073122978 MULTI CID FTMS 0 0 0 2830 36131.51953125 0.4057992231891362 -13 0.0512905120849609 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.009 25811.5 0.4099999964237213 74 2755 2830 HBL1_DMSO_200M_050219_1,2831 HBL1_DMSO_200M_050219_1,2831, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2833 11.677 328.0 101970.0 25 0 4508.3 -1 0 76 452.7043099852464 1806.7881340745853 4 452.7042419314384 MULTI CID FTMS 0 0 0 2832 139083.625 0.4692077276157863 -13 0.0637722015380859 1 3 D 1 -1 13.979 0.0 0.0 0.77372 0.0 0.0 1673.750351337084 0.0 1673.750351337084 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.77372 - 40 + 1 2.014 36977.2 1.0 75 2756 2832 HBL1_DMSO_200M_050219_1,2833 HBL1_DMSO_200M_050219_1,2833, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2892 11.918 800.0 42995.0 25 0 1973.9 + -1 GADAMAEVFNA 11 86 556.241304384527 0 556.2407104372978 PEAK CID FTMS 0 0 0 2891 59989.078125 0.6246311524151351 1 -0.0163183212280273 1 Oxidation (M) _GADAM(Oxidation (M))AEVFNA_ REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1 17.11289562659939 0.3845757490720307 3 QQAEHQ 6 -1 39.39 0.0 0.0 3.5472 0.0 0.0 203.0883694118289 183.0411318414672 386.1295012532961 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.6694451763165201 0.0 QQAEHQ 3.5472 - 159 + 1 2.016 31392.2 0.5 76 2814 2891 HBL1_DMSO_200M_050219_1,2892 HBL1_DMSO_200M_050219_1,2892,GADAMAEVFNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 2899 11.953 800.0 26587.0 25 0 3187.5 -1 0 55 452.7043099852464 1806.7881340745853 4 452.7040893435478 MULTI CID FTMS 0 0 0 2898 39308.29296875 0.1326091034823314 51 -0.2123622894287109 1 3 H 1 -1 13.495 0.0 0.0 0.7469 0.0 0.0 1651.718140033373 0.0 1651.718140033373 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.7469 - 28 + 1 2.016 28156.8 0.4600000083446502 77 2820 2898 HBL1_DMSO_200M_050219_1,2899 HBL1_DMSO_200M_050219_1,2899, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2964 12.217 800.0 27931.0 25 0 1585.8 -1 0 49 516.7340060528301 2062.90691834492 4 516.7338744997978 MULTI CID FTMS 0 0 0 2963 50393.40625 0.3287357713682767 -57 0.2236175537109375 1 3 Q 1 -1 3.4949 0.0 0.0 0.16941 0.0 0.0 1694.7724101435513 237.0516604059204 1931.824070549472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.16941 - 11 + 1 2.016 27859.9 0.4699999988079071 78 2884 2963 HBL1_DMSO_200M_050219_1,2964 HBL1_DMSO_200M_050219_1,2964, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 2965 12.231 800.0 34346.0 25 0 1926.1 + -1 GADAMAEVFNA 11 65 556.2414415265304 1110.4683301198606 2 556.2415038943291 MULTI CID FTMS 0 0 0 2963 88625.125 0.831680775796364 -41 0.1607370376586914 2 Oxidation (M) _GADAM(Oxidation (M))AEVFNA_ REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1 13.90604991867851 0.7458848613461305 3 [AG]AHDEAQ 8 -1 30.91 0.0 0.0 2.7835 0.0 0.0 0.0 328.12722829450723 328.12722829450723 13.43041406322168 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [AG]AHDEAQ 2.7835 - 137 1 2.016 27417.6 0.4900000095367431 79 2884 2963 HBL1_DMSO_200M_050219_1,2965 HBL1_DMSO_200M_050219_1,2965,GADAMAEVFNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 2981 12.302 800.0 145340.0 25 0 105060.0 -1 QMLFRHMFYC 10 55 488.8800086213456 0 488.8799011111259 PEAK CID FTMS 0 0 0 2980 120168.65625 0.3496865467876399 -755 3.324249267578125 1 Carbamidomethyl (C),2 Oxidation (M) _QM(Oxidation (M))LFRHM(Oxidation (M))FYC(Carbamidomethyl (C))_ ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2 0.1593219195374162 0.3961065659209837 3 G 1 -1 6.9897 0.0 0.0 0.71634 0.0 0.0 557.7576561482421 357.9404390924438 915.698095240686 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.71634 - 1 + 1 2.021 96434.4 0.5899999737739563 80 2899 2980 HBL1_DMSO_200M_050219_1,2981 HBL1_DMSO_200M_050219_1,2981,QMLFRHMFYC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 2992 12.354 800.0 34971.0 25 0 2821.2 -1 0 51 484.47001505311175 1933.850954346047 4 484.4700195193291 MULTI CID FTMS 0 0 0 2991 43261.7578125 0.4061052506519679 1 -0.0162973403930664 1 3 [PG]SR[HS]T 7 -1 40.233 0.0 0.0 2.0805 0.0 0.0 0.0 1208.490069807884 1208.490069807884 23.243719559664413 0.0 0.0 0.0 0 0.8494850021680094 0.0 1.274227503252014 0.0 [PG]SR[HS]T 2.0805 - 69 + 1 2.021 35839.2 0.5199999809265137 81 2909 2991 HBL1_DMSO_200M_050219_1,2992 HBL1_DMSO_200M_050219_1,2992, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3021 12.476 800.0 52567.0 25 0 2630.0 -1 0 81 516.7340060528301 2062.90691834492 4 516.7339355349541 MULTI CID FTMS 0 0 0 3020 31819.2734375 0.2075694853005631 -4 0.0156536102294921 1 3 H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3 -1 9.41 0.0 0.0 0.45615 0.0 0.0 1663.766978014645 0.0 1663.766978014645 0.0 3.925449767853312 0.0 0.0 0 0.5 0.0 0.5 0.0 H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 0.45615 - 61 + 1 2.021 42001.0 0.6299999952316284 82 2937 3020 HBL1_DMSO_200M_050219_1,3021 HBL1_DMSO_200M_050219_1,3021, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3027 12.508 800.0 60707.0 25 0 4804.8 + 29109 QERDDRWMKSA 11 90 474.55867636145 1420.65419968455 3 474.5595886111259 MULTI CID FTMS 0 0 0 3026 64747.35546875 0.4817312190390185 -42 0.1900243759155273 1 Unmodified _QERDDRWMKSA_ REV__ENSG00000184787|ENST00000345496|UBE2G2;REV__ENST00000477954.5_1_21:46191294-46194726:-|nuORF;REV__ENST00000481546.1_1_21:46191294-46193735:-|nuORF;REV__ENST00000491513.5_1_21:46191294-46199096:-|nuORF;REV__ENST00000497630.5_1_21:46191294-46221727:-|nuORF;REV__nc|ENSG00000184787|P60604-2|UBE2G2 4.11662792887243 0.8557254166428417 3 QGSH 4 -1 33.22 0.0 0.0 2.3383 0.0 0.0 993.4728775183374 0.0 993.4728775183374 0.0 21.62585341864037 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.5 QGSH 2.3383 - 251 + 1 2.021 44222.9 0.5199999809265137 83 2942 3026 HBL1_DMSO_200M_050219_1,3027 HBL1_DMSO_200M_050219_1,3027,QERDDRWMKSA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3034 12.54 573.0 46214.0 25 0 2463.1 + -1 GADAMAEVFNA 11 63 556.2414415265304 1110.4683301198606 2 556.2404662966728 MULTI CID FTMS 0 0 0 3033 93135.984375 0.8740118306130236 23 -0.1238012313842773 1 Oxidation (M) _GADAM(Oxidation (M))AEVFNA_ REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1 13.042465956692816 0.7638483625850725 3 [AG]DAHEAQ 8 -1 33.618 0.0 0.0 3.0274 0.0 0.0 0.0 328.1257699715048 328.1257699715048 13.201208443269728 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3807196863200844 0.0 [AG]DAHEAQ 3.0274 - 124 1 2.027 26164.2 1.0 84 2948 3033 HBL1_DMSO_200M_050219_1,3034 HBL1_DMSO_200M_050219_1,3034,GADAMAEVFNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3042 12.58 800.0 37750.0 25 0 2440.0 + -1 GPWNWYMHCLK 11 74 497.8941019011808 0 497.8935729861259 PEAK CID FTMS 0 0 0 3041 36993.1484375 0.3395360817091178 -23 0.1238775253295898 1 Carbamidomethyl (C) _GPWNWYMHC(Carbamidomethyl (C))LK_ REV__ENSG00000197181|ENST00000356766|PIWIL2;REV__ENST00000519884.1_1_8:22210459-22213015:+|nuORF;REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2 2.843284757254958 0.4761840153648598 3 QGSH 4 -1 18.787 0.0 0.0 1.8904 0.0 0.0 172.43473592951153 409.1466158502563 581.5813517797678 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.5 QGSH 1.8904 - 138 + 1 2.027 28602.9 0.5 85 2955 3041 HBL1_DMSO_200M_050219_1,3042 HBL1_DMSO_200M_050219_1,3042,GPWNWYMHCLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3054 12.636 800.0 133450.0 25 0 53313.0 + 7344 EFYNKWYPR 9 63 434.8819223092542 0 434.8818237185478 PEAK CID FTMS 0 0 0 3053 222446.578125 0.7843344134111083 96 -0.6172075271606445 1 Unmodified _EFYNKWYPR_ REV__ENSG00000138175|ENST00000260746|ARL3 1.6526216038709556 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.027 88084.2 0.7200000286102295 86 2966 3053 HBL1_DMSO_200M_050219_1,3054 HBL1_DMSO_200M_050219_1,3054,EFYNKWYPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3078 12.739 800.0 35972.0 25 0 2425.5 -1 0 63 595.9421306238353 1784.8045624717056 3 595.9422485232353 MULTI CID FTMS 0 0 0 3077 63538.66015625 0.1253540082494649 -29 0.1264638900756836 1 3 Q 1 -1 15.986 0.0 0.0 0.89568 0.0 0.0 1638.735377146313 0.0 1638.735377146313 0.0 6.382104921644451 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 Q 0.89568 - 23 + 1 2.032 30641.6 0.4600000083446502 87 2989 3077 HBL1_DMSO_200M_050219_1,3078 HBL1_DMSO_200M_050219_1,3078, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3081 12.759 800.0 71842.0 25 0 5939.0 -1 PTFFSMCKIMK 11 93 474.55867636145 1420.65419968455 3 474.5583984255791 MULTI CID FTMS 0 0 0 3080 77354.53125 0.5755307281274166 7 -0.0646429061889648 1 Carbamidomethyl (C),2 Oxidation (M) _PTFFSM(Oxidation (M))C(Carbamidomethyl (C))KIM(Oxidation (M))K_ ENST00000270139.7_1_21:34728337-34728493:+|nuORF 2.6312355333042263 0.8627335947654684 3 QGSH 4 -1 35.522 0.0 0.0 2.5004 0.0 0.0 993.4737763244884 0.0 993.4737763244884 0.0 24.92576207804733 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.5 QGSH 2.5004 - 345 + 1 2.032 50809.1 0.5 88 2991 3080 HBL1_DMSO_200M_050219_1,3081 HBL1_DMSO_200M_050219_1,3081,PTFFSMCKIMK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 3086 12.787 800.0 377060.0 25 0 76187.0 + 23299 LTAAKKARAG 10 205 329.5416529861492 985.6031295586477 3 329.5411254763603 MULTI CID FTMS 0 0 0 3085 192557.328125 0.3157601173294032 -37 0.1826658248901367 1 Unmodified _LTAAKKARAG_ ENSG00000178372|ENST00000380332|CALML5 32.78568957990786 0.2337485590374503 3 {I|L}TAAKK 6 4 60.38 0.0 0.0 6.1262 0.0 0.0 0.0 370.1842546481871 370.1842546481871 48.39062518744797 0.0 0.0 0.0 0 0.3252574989159953 1.0 0.4247425010840047 0.3494850021680094 + {I|L}TAAKK 6.1262 + + 185 + 1 2.032 241098.4 0.7300000190734863 89 2995 3085 HBL1_DMSO_200M_050219_1,3086 HBL1_DMSO_200M_050219_1,3086,LTAAKKARAG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3089 12.807 800.0 51995.0 25 0 2564.8 + -1 EFIMDQQQG 9 94 556.2413477028034 1110.4681424724067 2 556.2417480349541 MULTI CID FTMS 0 0 0 3088 79046.421875 0.6466921710362953 -14 0.0922574996948242 1 Oxidation (M) _EFIM(Oxidation (M))DQQQG_ REV__ENSG00000076382|ENST00000321765|SPAG5 37.97399986684836 0.0865783450051559 3 [AG]AHDEAQQGQ 11 -1 + 72.837 0.0 0.0 6.5591 6.5591 78.586 0.0 0.0 0.0 5.850266520291811 9.555238810733435 5.850266520291811 0.6459105330136623 0 0.968765315847925 1.3979400086720375 1.1861818737241734 0.4247425010840047 [AG]AHDEAQQGQ;[AG]AHDEAGAQGQ;[AG]DAHEAQQGQ;[AG]DAHEAGAQGQ;[AG]ADHEAQQGQ;[QA]HDEAGAQGQ;[AG]ADHEAGAQGQ;{[DA]|[EG]}QHEAGAQGQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQGQ;[AG]AHDEQAQGQ 6.5591;6.501;6.2253;6.1672;6.0692;6.0323;6.011;5.972;5.9585;5.9056 -;-;-;-;-;-;-;-;-;- 666 1 2.032 39298.9 0.5299999713897705 90 2997 3088 HBL1_DMSO_200M_050219_1,3089 HBL1_DMSO_200M_050219_1,3089,EFIMDQQQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3093 12.832 800.0 58920.0 25 0 4613.6 + -1 EKWCMKMIDYL 11 89 497.8942498805964 1490.660920241989 3 497.8940307497978 MULTI CID FTMS 0 0 0 3092 99032.078125 0.4715661669208251 -20 0.1283159255981445 1 2 Oxidation (M) _EKWCM(Oxidation (M))KM(Oxidation (M))IDYL_ REV__ENSG00000254087|ENST00000519728|LYN;REV__nc|ENSG00000254087|P07948-2|LYN 4.11662792887243 0.8557254166428417 3 [PG]S[NG]HSGQ 9 -1 47.022 0.0 0.0 3.1544 0.0 0.0 0.0 666.291022130914 666.291022130914 30.47258004721931 0.0 0.0 0.0 0 0.0 2.0 0.6694451763165201 0.5 [PG]S[NG]HSGQ 3.1544 - 447 1 2.032 41607.3 0.6200000047683716 91 3000 3092 HBL1_DMSO_200M_050219_1,3093 HBL1_DMSO_200M_050219_1,3093,EKWCMKMIDYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3097 12.856 800.0 34883.0 25 0 2919.3 + -1 RFWCTWWRCSL 11 58 553.2556868770375 1656.7452312313126 3 553.2554199099541 MULTI CID FTMS 0 0 0 3096 72828.6484375 0.3183332040249157 -22 0.148533821105957 1 2 Carbamidomethyl (C) _RFWC(Carbamidomethyl (C))TWWRC(Carbamidomethyl (C))SL_ REV__ENST00000569069.1_1_15:75658861-75660070:-|nuORF 0.0 0.8751479354844584 3 Q[SG]H{[YC]|[HE]} 6 -1 16.968 0.0 0.0 1.0242 0.0 0.0 963.4623960375848 0.0 963.4623960375848 0.0 9.97810928665125 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.5 Q[SG]H{[YC]|[HE]} 1.0242 - 36 + 1 2.032 27426.9 0.4799999892711639 92 3003 3096 HBL1_DMSO_200M_050219_1,3097 HBL1_DMSO_200M_050219_1,3097,RFWCTWWRCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3120 12.955 800.0 38947.0 25 0 10987.0 -1 0 60 636.6243004048025 1906.851071814608 3 636.6238891482353 MULTI CID FTMS 0 0 0 3119 90068.84375 0.7771529354601341 -14 0.0551939010620117 1 3 {[DA]|[EG]}S 3 -1 30.502 0.0 0.0 1.5996 0.0 0.0 0.0 1630.732058713298 1630.732058713298 18.02764671460736 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3054621874040891 0.0 {[DA]|[EG]}S 1.5996 - 113 1 2.036 33017.7 0.4600000083446502 93 3025 3119 HBL1_DMSO_200M_050219_1,3120 HBL1_DMSO_200M_050219_1,3120, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3124 12.979 800.0 71916.0 25 0 9582.5 + -1 CHRHWRKMRCM 11 84 415.19414195916846 1656.747461970274 4 415.1931335330009 MULTI CID FTMS 0 0 0 3123 18975.8984375 0.2568204118575035 1 -0.0163040161132812 1 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))HRHWRKMRC(Carbamidomethyl (C))M_ REV__ENST00000360093.7_1_2:166027051-166032921:-|nuORF 0.0833504608790944 0.8747546825782322 3 E 1 -1 13.654 0.0 0.0 0.82412 0.0 0.0 1509.6937795745691 0.0 1509.6937795745691 0.0 1.17931555708239 0.0 0.0 0 0.0 0.0 0.2059771852360797 0.0 E 0.82412 - 83 + 1 2.036 55873.2 0.4600000083446502 94 3028 3123 HBL1_DMSO_200M_050219_1,3124 HBL1_DMSO_200M_050219_1,3124,CHRHWRKMRCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3126 12.985 198.0 121060.0 25 0 8440.4 -1 0 63 595.9421306238353 1784.8045624717056 3 595.9420654177666 MULTI CID FTMS 0 0 0 3125 251441.859375 0.4960640472563405 11 -0.078618049621582 1 3 Q 1 -1 16.382 0.0 0.0 0.91787 0.0 0.0 1638.7351482644774 0.0 1638.7351482644774 0.0 2.798611065162202 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 Q 0.91787 - 32 + 1 2.036 26310.3 1.0 95 3029 3125 HBL1_DMSO_200M_050219_1,3126 HBL1_DMSO_200M_050219_1,3126, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3129 13.005 800.0 45181.0 25 0 3614.0 -1 0 82 624.952780535382 1871.8365122063456 3 624.9528686404228 MULTI CID FTMS 0 0 0 3128 96397.9296875 0.4216036535758937 -14 0.08221435546875 1 3 E 1 -1 9.6041 0.0 0.0 0.51308 0.0 0.0 962.4576802745084 777.2945660300893 1739.7522463045975 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E 0.51308 - 26 + 1 2.036 33940.2 0.4199999868869781 96 3031 3128 HBL1_DMSO_200M_050219_1,3129 HBL1_DMSO_200M_050219_1,3129, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3136 13.041 800.0 54427.0 25 0 3256.9 + -1 HEREMFRDVE 10 89 455.20805262595513 1362.6023284780654 3 455.2076599001884 MULTI CID FTMS 0 0 0 3135 57883.66796875 0.7393190482253611 1 -0.0163125991821289 1 Oxidation (M) _HEREM(Oxidation (M))FRDVE_ REV__ENSG00000197283|ENST00000646630|SYNGAP1;REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF;REV__nc|ENSG00000197283|Q96PV0-2|SYNGAP1;REV__nc|ENSG00000197283|Q96PV0-3|SYNGAP1;REV__nc|ENSG00000197283|Q96PV0-4|SYNGAP1 3.319642798002388 0.7112812012931492 3 [PG]S 3 -1 17.42 0.0 0.0 1.2785 0.0 0.0 0.0 1118.47332086992 1118.47332086992 0.8214215303265604 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [PG]S 1.2785 - 156 1 2.036 39014.1 0.4699999988079071 97 3037 3135 HBL1_DMSO_200M_050219_1,3136 HBL1_DMSO_200M_050219_1,3136,HEREMFRDVE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3139 13.057 554.0 61347.0 25 0 2961.2 + -1 EFIMDQQQG 9 75 556.2413477028034 1110.4681424724067 2 556.2412597537041 MULTI CID FTMS 0 0 0 3138 82209.625 0.6725708717771066 28 -0.2142496109008789 1 Oxidation (M) _EFIM(Oxidation (M))DQQQG_ REV__ENSG00000076382|ENST00000321765|SPAG5 13.90604991867851 0.4602628045680013 3 [QA]HDEAQQ{[QG]|[NA]} 10 -1 + 54.654 0.0 0.0 4.9217 4.9217 82.965 0.0 0.0 0.0 7.269987279362624 44.15160331023991 7.269987279362624 8.750612633917001 0 0.5 0.0 0.3494850021680094 0.7742275032520141 [QA]HDEAQQ{[QG]|[NA]};[HD][QA]EAQQ{[QG]|[NA]};{[DA]|[EG]}[HQ]EAQQ{[QG]|[NA]};[QA]HDEAQ[AG]{[QG]|[NA]};[QA]HDEA[AG]Q{[QG]|[NA]};{[DA]|[EG]}G[HA]EAQQ{[QG]|[NA]};{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]EAQQ{[QG]|[NA]};{[DA]|[EG]}[HQ]EAQ[AG]{[QG]|[NA]};{[DA]|[EG]}[HQ]EA[AG]Q{[QG]|[NA]};[HD][QA]EAQ[AG]{[QG]|[NA]} 4.9217;4.1337;4.1337;4.0964;4.0964;3.9573;3.9509;3.3084;3.3084;3.3084 -;-;-;-;-;-;-;-;-;- 226 1 2.036 34691.7 1.0 98 3039 3138 HBL1_DMSO_200M_050219_1,3139 HBL1_DMSO_200M_050219_1,3139,EFIMDQQQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3142 13.078 800.0 69438.0 25 0 5507.4 -1 0 96 607.6138297937048 1819.819659981314 3 607.9482299685478 MULTI CID FTMS 0 0 0 3141 96087.125 0.098340146936386 -43 0.2538089752197265 1 3 QKSGE 5 -1 43.94 0.0 0.0 2.4145 0.0 0.0 1272.5686967018205 0.0 1272.5686967018205 0.0 33.759101752131855 0.0 0.0 0 0.4247425010840047 0.0 1.0228787452803376 0.0 QKSGE 2.4145 - 232 + 1 2.036 47438.8 0.4600000083446502 99 3041 3141 HBL1_DMSO_200M_050219_1,3142 HBL1_DMSO_200M_050219_1,3142, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3147 13.094 95.0 620870.0 25 0 92807.0 + 23300 LTAAKKARAG 10 90 329.5416529861492 985.6031295586477 3 329.5413085818291 MULTI CID FTMS 0 0 0 3146 388683.1875 0.6373719976489024 13 -0.1194076538085937 1 Unmodified _LTAAKKARAG_ ENSG00000178372|ENST00000380332|CALML5 20.41453444215458 0.5050059513928961 3 {I|L}TAAKK 6 4 60.054 0.0 0.0 6.0931 0.0 0.0 0.0 370.1844271295532 370.1844271295532 57.57999250452839 0.0 0.0 0.0 0 0.2887254899964357 1.3010299956639813 0.0 0.0 + {I|L}TAAKK 6.0931 + + 40 + 1 2.04 52621.9 1.0 100 3045 3146 HBL1_DMSO_200M_050219_1,3147 HBL1_DMSO_200M_050219_1,3147,LTAAKKARAG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3148 13.108 800.0 42975.0 25 0 2517.5 + -1 GPWNWYMHCLK 11 88 497.8942498805964 1490.660920241989 3 497.8940002322197 MULTI CID FTMS 0 0 0 3146 56659.78515625 0.2697998286066995 25 -0.1820135116577148 2 Carbamidomethyl (C) _GPWNWYMHC(Carbamidomethyl (C))LK_ REV__ENSG00000197181|ENST00000356766|PIWIL2;REV__ENST00000519884.1_1_8:22210459-22213015:+|nuORF;REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2 2.843284757254958 0.8617331327080043 3 [PG]S 3 -1 27.447 0.0 0.0 1.8413 0.0 0.0 0.0 1246.5315769404845 1246.5315769404845 11.606056125004828 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [PG]S 1.8413 - 80 1 2.04 32796.3 0.4900000095367431 101 3045 3146 HBL1_DMSO_200M_050219_1,3148 HBL1_DMSO_200M_050219_1,3148,GPWNWYMHCLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3149 13.122 800.0 20553.0 25 0 2183.6 -1 0 42 500.9778739629538 1999.882389985416 4 500.9774352908134 MULTI CID FTMS 0 0 0 3146 90081.0 1.0 0 0.0 3 3 H 1 -1 16.99 0.0 0.0 0.84953 0.0 0.0 1844.8128994842416 0.0 1844.8128994842416 0.0 7.323937598229689 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.84953 - 29 + 1 2.04 28616.9 0.4900000095367431 102 3045 3146 HBL1_DMSO_200M_050219_1,3149 HBL1_DMSO_200M_050219_1,3149, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3151 13.138 800.0 26474.0 25 0 2960.7 + -1 RFWCTWWRCSL 11 50 553.2556868770375 1656.7452312313126 3 553.5895873904228 MULTI CID FTMS 0 0 0 3150 41129.875 0.2442772857031762 21 -0.1377506256103515 1 2 Carbamidomethyl (C) _RFWC(Carbamidomethyl (C))TWWRC(Carbamidomethyl (C))SL_ REV__ENST00000569069.1_1_15:75658861-75660070:-|nuORF 0.0 0.8751479354844584 3 H{[YC]|[HE]} 3 -1 8.9524 0.0 0.0 0.54036 0.0 0.0 1235.5750784986938 0.0 1235.5750784986938 0.0 6.478174818886375 0.0 0.0 0 0.0 0.0 0.0 0.0 H{[YC]|[HE]} 0.54036 - 22 + 1 2.04 25112.9 0.3700000047683716 103 3046 3150 HBL1_DMSO_200M_050219_1,3151 HBL1_DMSO_200M_050219_1,3151,RFWCTWWRCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3152 13.152 800.0 59207.0 25 0 6101.0 -1 KRYYCELCLDD 11 78 493.21851889078295 1476.6337272725489 3 493.2180969119072 MULTI CID FTMS 0 0 0 3150 86579.59375 0.9359597981597496 2 -0.0478410720825195 2 Carbamidomethyl (C) _KRYYC(Carbamidomethyl (C))ELCLDD_ ENSG00000197283|ENST00000646630|SYNGAP1;ENST00000479510.2_1_6:33387852-33406697:+|nuORF;nc|ENSG00000197283|Q96PV0-2|SYNGAP1;nc|ENSG00000197283|Q96PV0-3|SYNGAP1;nc|ENSG00000197283|Q96PV0-4|SYNGAP1 4.406150317652783 0.8543594311449257 3 D 1 -1 19.386 0.0 0.0 1.3129 0.0 0.0 1343.5959903114144 0.0 1343.5959903114144 0.0 3.3875091305337506 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 D 1.3129 + + 52 + 1 2.04 43873.5 0.3899999856948852 104 3046 3150 HBL1_DMSO_200M_050219_1,3152 HBL1_DMSO_200M_050219_1,3152,KRYYCELCLDD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3153 13.166 800.0 60990.0 25 0 4943.4 -1 0 91 455.9617665873834 1819.8179604831337 4 455.9620849490166 MULTI CID FTMS 0 0 0 3150 83411.21875 0.2816978243120819 -42 0.2659616470336914 3 3 GE 2 -1 29.024 0.0 0.0 1.5949 0.0 0.0 1615.7429157827414 0.0 1615.7429157827414 0.0 15.42333368553521 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 GE 1.5949 - 123 + 1 2.04 43735.6 0.3799999952316284 105 3046 3150 HBL1_DMSO_200M_050219_1,3153 HBL1_DMSO_200M_050219_1,3153, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3166 13.225 800.0 75058.0 25 0 43644.0 -1 HGDHVFLEQM 10 33 614.7767681707031 0 614.7772094607353 PEAK CID FTMS 0 0 0 3165 85747.6484375 0.2100689119954016 362 -2.4585723876953125 1 Oxidation (M) _HGDHVFLEQM(Oxidation (M))_ ENST00000337318.7_2_10:126309750-126310008:-|nuORF 3.5964929083625545 0.3961065659209837 3 C 1 -1 2.4743 0.0 0.0 0.20156 0.0 0.0 995.4904584832046 126.01978479556875 1121.5102432787735 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.20156 - 2 + 1 2.04 49682.7 0.5 106 3058 3165 HBL1_DMSO_200M_050219_1,3166 HBL1_DMSO_200M_050219_1,3166,HGDHVFLEQM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 3172 13.248 253.0 67997.0 25 0 5151.9 -1 0 46 624.952780535382 1871.8365122063456 3 624.9527465701103 MULTI CID FTMS 0 0 0 3171 140381.5625 0.6139694061538262 18 -0.0869636535644531 1 3 Q 1 -1 8.8515 0.0 0.0 0.47288 0.0 0.0 963.4675069346646 777.2944402494278 1740.7619471840924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 Q 0.47288 - 4 + 1 2.04 22285.9 1.0 107 3063 3171 HBL1_DMSO_200M_050219_1,3172 HBL1_DMSO_200M_050219_1,3172, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3187 13.315 800.0 64509.0 25 0 3160.8 + 5925 DQALCVYDGQ 10 109 556.2413477028034 1110.4681424724067 2 556.2415038943291 MULTI CID FTMS 0 0 0 3186 84161.5703125 0.6885400671175471 66 -0.4897546768188476 1 Unmodified _DQALCVYDGQ_ REV__ENSG00000128052|ENST00000263923|KDR;REV__nc|ENSG00000128052|P35968-2|KDR;REV__nc|ENSG00000128052|P35968-3|KDR 31.26834338654808 0.266153677697784 3 {[DA]|[EG]}QHEAGAQ{[QG]|[NA]} 11 -1 + 64.376 0.0 0.0 5.7972 5.7972 77.225 0.0 0.0 0.0 1.2763625255165252 5.862435673934272 1.2763625255165252 1.2763625255165252 0 0.9247425010840048 0.0 0.7059771852360797 1.6421590589602533 {[DA]|[EG]}QHEAGAQ{[QG]|[NA]};{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQ{[QG]|[NA]};[AG]DAHEAQQ{[QG]|[NA]};[QA]DHEAGAQ{[QG]|[NA]};[AG]DAHEAGAQ{[QG]|[NA]};[AG]AHDEAQQ{[QG]|[NA]};[AG]ADHEAQQ{[QG]|[NA]};[QA]HDEAGAQ{[QG]|[NA]};{[DA]|[EG]}QHEAQQ{[QG]|[NA]};{[QG]|[NA]}EHEAGAQ{[QG]|[NA]} 5.7972;5.6823;5.6672;5.5927;5.4901;5.3997;5.3525;5.297;5.2919;5.2551 -;-;-;-;-;-;-;-;-;- 967 1 2.04 41104.5 0.550000011920929 108 3077 3186 HBL1_DMSO_200M_050219_1,3187 HBL1_DMSO_200M_050219_1,3187,DQALCVYDGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3190 13.324 51.0 475120.0 25 0 44518.0 -1 0 53 607.6138297937048 1819.819659981314 3 607.9479247927666 MULTI CID FTMS 0 0 0 3189 817882.6875 0.8370601541619268 -5 0.0320024490356445 1 3 KSGE 4 -1 45.037 0.0 0.0 2.4748 0.0 0.0 1400.6284196022111 0.0 1400.6284196022111 0.0 34.579569145996345 0.0 0.0 0 0.4247425010840047 0.0 1.0356668758921828 0.0 KSGE 2.4748 - 46 + 1 2.04 24592.3 1.0 109 3079 3189 HBL1_DMSO_200M_050219_1,3190 HBL1_DMSO_200M_050219_1,3190, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3197 13.36 800.0 34995.0 25 0 2895.4 -1 0 41 910.9165802566002 1819.8186075800004 2 911.4171630740166 MULTI CID FTMS 0 0 0 3196 47361.4375 0.5102463131637984 1 -0.0163698196411132 1 3 H 1 -1 3.9794 0.0 0.0 0.21867 0.0 0.0 926.4340383434754 753.3238009088499 1679.7578392523253 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.21867 - 7 + 1 2.042 24084.0 0.449999988079071 110 3085 3196 HBL1_DMSO_200M_050219_1,3197 HBL1_DMSO_200M_050219_1,3197, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3202 13.388 800.0 11725.0 25 0 1028.1 -1 0 35 513.7335402567836 2050.9050551607343 4 513.7338134646416 MULTI CID FTMS 0 0 0 -1 0 1 3 H 1 -1 13.979 0.0 0.0 0.68162 0.0 0.0 1895.8352442249904 0.0 1895.8352442249904 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.68162 - 11 + 1 2.042 18504.5 0.4399999976158142 111 3089 3201 HBL1_DMSO_200M_050219_1,3202 HBL1_DMSO_200M_050219_1,3202, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3205 13.408 800.0 41812.0 25 0 2634.8 -1 TWYRHYRCCRQ 11 61 543.5804639127488 1627.7195623384462 3 543.5809203982353 MULTI CID FTMS 0 0 0 3204 48865.08203125 0.5501373511596657 -10 0.0640125274658203 1 Carbamidomethyl (C) _TWYRHYRC(Carbamidomethyl (C))CRQ_ ENST00000448464.6_1_8:95941986-95942052:-|nuORF 0.4545168274142398 0.8730034954726786 3 HQ 2 -1 21.013 0.0 0.0 1.291 0.0 0.0 1344.5915238636398 0.0 1344.5915238636398 0.0 8.249212204192737 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 HQ 1.291 - 102 + 1 2.042 37104.1 0.449999988079071 112 3091 3204 HBL1_DMSO_200M_050219_1,3205 HBL1_DMSO_200M_050219_1,3205,TWYRHYRCCRQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 3207 13.415 220.0 98674.0 25 0 10289.0 -1 0 52 455.9617665873834 1819.8179604831337 4 455.9618408083916 MULTI CID FTMS 0 0 0 3206 230172.46875 0.7773424802453887 4 -0.0305290222167968 1 3 GE 2 -1 26.454 0.0 0.0 1.4536 0.0 0.0 1615.7433430288352 0.0 1615.7433430288352 0.0 19.463950151760656 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 GE 1.4536 - 14 + 1 2.042 24944.0 1.0 113 3092 3206 HBL1_DMSO_200M_050219_1,3207 HBL1_DMSO_200M_050219_1,3207, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3210 13.435 800.0 30342.0 25 0 2183.6 -1 0 60 684.642030648244 2050.904262544932 3 684.6414062380791 MULTI CID FTMS 0 0 0 3209 58938.5 0.6958269537980217 1 -0.0163354873657226 1 3 Q 1 -1 13.099 0.0 0.0 0.63869 0.0 0.0 1904.835138254696 0.0 1904.835138254696 0.0 0.422881389671657 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.63869 - 53 + 1 2.042 26140.0 0.4600000083446502 114 3094 3209 HBL1_DMSO_200M_050219_1,3210 HBL1_DMSO_200M_050219_1,3210, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3213 13.455 800.0 28171.0 25 0 2761.4 -1 0 56 626.6207303110868 1876.8403615334605 3 626.6216918826103 MULTI CID FTMS 0 0 0 3212 49266.79296875 0.6317370413328154 -17 0.1194257736206054 1 3 {[DA]|[EG]}S 3 -1 18.851 0.0 0.0 1.0044 0.0 0.0 0.0 1600.72153153762 1600.72153153762 10.892044743784597 0.0 0.0 0.0 0 0.0 0.958607314841775 0.2302046884880938 0.0 {[DA]|[EG]}S 1.0044 - 62 1 2.042 23167.4 0.4199999868869781 115 3096 3212 HBL1_DMSO_200M_050219_1,3213 HBL1_DMSO_200M_050219_1,3213, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3221 13.495 800.0 46782.0 25 0 3205.7 + -1 SSLYYQDCLMR 11 79 479.2150696097252 1434.6233794293755 3 479.2157165408134 MULTI CID FTMS 0 0 0 3220 44854.1015625 0.5508926527304441 1 -0.016331672668457 1 Carbamidomethyl (C) _SSLYYQDC(Carbamidomethyl (C))LMR_ REV__ENSG00000004799|ENST00000005178|PDK4;REV__ENST00000473796.1_1_7:95214955-95221973:-|nuORF 6.623454094837244 0.8438980474264925 3 [PG]S 3 -1 22.932 0.0 0.0 1.5985 0.0 0.0 0.0 1190.4944328563868 1190.4944328563868 8.420190159878267 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [PG]S 1.5985 - 68 1 2.042 34978.2 0.4900000095367431 116 3103 3220 HBL1_DMSO_200M_050219_1,3221 HBL1_DMSO_200M_050219_1,3221,SSLYYQDCLMR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3228 13.53 800.0 53881.0 25 0 3660.9 -1 0 79 450.7068509502281 1798.7982979345124 4 450.7068054080009 MULTI CID FTMS 0 0 0 3227 35525.7421875 0.2855566023819791 -13 0.0757122039794921 1 3 EH 2 -1 22.391 0.0 0.0 1.2448 0.0 0.0 1514.6866473991593 0.0 1514.6866473991593 0.0 8.548182249753236 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 EH 1.2448 - 72 + 1 2.044 45456.0 0.449999988079071 117 3109 3227 HBL1_DMSO_200M_050219_1,3228 HBL1_DMSO_200M_050219_1,3228, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3237 13.574 800.0 62852.0 25 0 2744.5 + -1 EFIMDQQQG 9 102 556.2412603772015 1110.4679678212028 2 556.2406494021416 MULTI CID FTMS 0 0 0 3236 138478.890625 0.7093730192417148 -63 0.364755630493164 1 Oxidation (M) _EFIM(Oxidation (M))DQQQG_ REV__ENSG00000076382|ENST00000321765|SPAG5 30.63653989081413 0.1413794767160703 3 [AG]DAHEAGAQNA 12 -1 + 70.26 0.0 0.0 6.3271 6.3271 77.803 0.0 0.0 0.0 5.790060878811588 7.689549981487062 5.790060878811588 0.5912145211865578 0 0.7638793319624579 1.6989700043360187 1.4361818737241734 0.0 [AG]DAHEAGAQNA;[AG]DAHEAQQNA;[AG]AHDEAGAQNA;[AG]AHDEAQQNA;{[DA]|[EG]}QHEAGAQNA;[AG]GEHEAGAQNA;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQNA;[AG]DAHEQAQNA;[AG]GEHEAQQNA;{[DA]|[EG]}GAHEAGAQNA 6.3271;6.2738;5.9395;5.8862;5.8057;5.7809;5.7598;5.7317;5.7277;5.5889 -;-;-;-;-;-;-;-;-;- 1134 1 2.044 45055.2 0.5199999809265137 118 3117 3236 HBL1_DMSO_200M_050219_1,3237 HBL1_DMSO_200M_050219_1,3237,EFIMDQQQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3239 13.58 153.0 141520.0 25 0 12024.0 -1 0 55 607.6138297937048 1819.819659981314 3 607.9481078982353 MULTI CID FTMS 0 0 0 3238 203603.703125 0.2083777413686259 34 -0.2774457931518554 1 3 SGE 3 -1 32.99 0.0 0.0 1.8128 0.0 0.0 1528.7127396705705 0.0 1528.7127396705705 0.0 22.53205960551832 0.0 0.0 0 0.0 0.0 0.9802046884880936 0.0 SGE 1.8128 - 103 + 1 2.044 27396.9 1.0 119 3118 3238 HBL1_DMSO_200M_050219_1,3239 HBL1_DMSO_200M_050219_1,3239, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3240 13.583 166.0 150970.0 25 0 13326.0 -1 0 55 605.9456919141732 1814.8152463427195 3 605.9459716677666 MULTI CID FTMS 0 0 0 3238 307491.71875 0.4237577298032445 -9 0.0599479675292968 2 3 Q 1 -1 8.9794 0.0 0.0 0.49478 0.0 0.0 993.4815804265068 690.259665407296 1683.7412458338029 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 Q 0.49478 - 53 + 1 2.044 28294.4 1.0 120 3118 3238 HBL1_DMSO_200M_050219_1,3240 HBL1_DMSO_200M_050219_1,3240, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3241 13.597 800.0 57400.0 25 0 2373.5 -1 0 79 454.7104670393269 1814.812762290908 4 454.7104064822197 MULTI CID FTMS 0 0 0 3238 77549.34375 0.4327948466003447 -11 0.0678911209106445 3 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GS[WE]Q 7 -1 20.039 0.0 0.0 1.1042 0.0 0.0 0.0 990.4483573438952 990.4483573438952 1.9403818747143544 0.0 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GS[WE]Q 1.1042 - 339 1 2.044 49934.9 0.7900000214576721 121 3118 3238 HBL1_DMSO_200M_050219_1,3241 HBL1_DMSO_200M_050219_1,3241, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3242 13.611 800.0 31074.0 25 0 3423.3 -1 0 43 574.5166859250926 2294.03763783397 4 574.5164062380791 MULTI CID FTMS 0 0 0 3238 71057.5625 0.7391145708815107 -3 0.0241851806640625 4 3 SGESS 5 -1 28.443 0.0 0.0 1.2399 0.0 0.0 1528.7138783987125 315.1420992486938 1843.855977647406 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 SGESS 1.2399 - 86 + 1 2.044 28814.8 0.3499999940395355 122 3118 3238 HBL1_DMSO_200M_050219_1,3242 HBL1_DMSO_200M_050219_1,3242, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3247 13.639 800.0 55622.0 25 0 3134.3 -1 0 84 563.2595211552514 1686.756734065954 3 563.2594482302666 MULTI CID FTMS 0 0 0 3246 75759.8359375 0.2350516750832487 -12 0.0918340682983398 1 3 Q[SG]HHE 6 -1 17.382 0.0 0.0 1.0305 0.0 0.0 993.4743376809917 0.0 993.4743376809917 0.0 11.897737521010828 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.5 Q[SG]HHE 1.0305 - 144 + 1 2.044 43668.1 0.4699999988079071 123 3122 3246 HBL1_DMSO_200M_050219_1,3247 HBL1_DMSO_200M_050219_1,3247, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3250 13.659 800.0 35620.0 25 0 2665.8 -1 0 37 716.3185699036712 3576.556467185356 5 716.5212890505791 MULTI CID FTMS 0 0 0 -1 0 1 3 EA 2 -1 10.573 0.0 0.0 0.29562 0.0 0.0 2732.197898925393 641.2564180963499 3373.4543170217435 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 EA 0.29562 - 4 + 1 2.044 31588.8 0.4399999976158142 124 3124 3249 HBL1_DMSO_200M_050219_1,3250 HBL1_DMSO_200M_050219_1,3250, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3251 13.667 464.0 145400.0 25 0 57202.0 + 7345 EFYNKWYPR 9 53 434.8819235238004 0 434.8819457888603 PEAK CID FTMS 0 0 0 3249 194019.9375 0.7092103455023288 -367 1.965165138244629 2 Unmodified _EFYNKWYPR_ REV__ENSG00000138175|ENST00000260746|ARL3 0.5247636613948944 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.044 58981.8 1.0 125 3124 3249 HBL1_DMSO_200M_050219_1,3251 HBL1_DMSO_200M_050219_1,3251,EFYNKWYPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3259 13.707 800.0 47917.0 25 0 1977.1 -1 0 91 472.46521102196135 1885.8317382214448 4 472.7156860232353 MULTI CID FTMS 0 0 0 3258 62174.68359375 0.2887009168941682 -12 0.0801677703857421 1 3 HESH 4 -1 29.553 0.0 0.0 1.5671 0.0 0.0 1377.6289678718804 0.0 1377.6289678718804 0.0 18.29353412159381 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 HESH 1.5671 - 141 + 1 2.044 44757.3 0.449999988079071 126 3131 3258 HBL1_DMSO_200M_050219_1,3259 HBL1_DMSO_200M_050219_1,3259, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3264 13.735 800.0 32013.0 25 0 3396.9 -1 0 55 634.9564022952225 1901.8473774858671 3 634.9556152224541 MULTI CID FTMS 0 0 0 3263 82865.0 0.2210090447114746 -23 0.180582046508789 1 3 A 1 -1 6.9897 0.0 0.0 0.36752 0.0 0.0 1308.5901886204358 519.1844576471311 1827.7746462675668 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.36752 - 67 + 1 2.044 30345.0 0.5099999904632568 127 3135 3263 HBL1_DMSO_200M_050219_1,3264 HBL1_DMSO_200M_050219_1,3264, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3265 13.749 800.0 38343.0 25 0 3038.8 -1 0 65 610.5305609390489 2438.093137889796 4 610.7811157107353 MULTI CID FTMS 0 0 0 3263 74164.640625 1.0 0 0.0 2 3 {[DA]|[EG]}[Y{I|L}]SSEGS 9 -1 37.949 0.0 0.0 1.5565 0.0 0.0 0.0 1525.6938266115762 1525.6938266115762 30.95947172861458 0.0 0.0 0.0 0 0.0 0.0 1.305462187404089 0.0 {[DA]|[EG]}[Y{I|L}]SSEGS 1.5565 - 70 1 2.044 32217.2 0.4699999988079071 128 3135 3263 HBL1_DMSO_200M_050219_1,3265 HBL1_DMSO_200M_050219_1,3265, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3269 13.773 800.0 15201.0 25 0 1671.5 + 2339 AQLEGLLLLL 10 25 541.8458436637452 0 541.8458740115166 PEAK CID FTMS 0 0 0 3268 17884.302734375 0.2588856889308278 1 -0.0163526535034179 1 Unmodified _AQLEGLLLLL_ REV__ENSG00000181830|ENST00000314134|SLC35C1;REV__nc|ENSG00000181830|Q96A29-2|SLC35C1 0.4007161486938917 0.3961065659209837 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.051 21442.1 0.4600000083446502 129 3138 3268 HBL1_DMSO_200M_050219_1,3269 HBL1_DMSO_200M_050219_1,3269,AQLEGLLLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3281 13.829 800.0 74760.0 25 0 3475.6 + -1 EFIMDQQQG 9 108 556.2412603772015 1110.4679678212028 2 556.2413207888603 MULTI CID FTMS 0 0 0 3280 86500.8515625 0.4431099206740199 -31 0.2380971908569336 1 Oxidation (M) _EFIM(Oxidation (M))DQQQG_ REV__ENSG00000076382|ENST00000321765|SPAG5 30.63653989081413 0.1413794767160703 3 [AG]DAHEAGAQ{[QG]|[NA]} 12 -1 + 69.567 0.0 0.0 6.2647 6.2647 77.415 0.0 0.0 0.0 0.5153844027246066 5.286596949921233 0.5153844027246066 0.5153844027246066 0 0.2302046884880938 1.5228787452803376 1.341129063296272 0.4247425010840047 [AG]DAHEAGAQ{[QG]|[NA]};{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQ{[QG]|[NA]};[AG]DAHEAQQ{[QG]|[NA]};[AG]AHDEAGAQ{[QG]|[NA]};{[DA]|[EG]}QHEAGAQ{[QG]|[NA]};[AG]DAHAEGAQ{[QG]|[NA]};[AG]AHDEAQQ{[QG]|[NA]};{[QD]|[EN]|[WG]|[KD]|[RS]}AHAEGAQ{[QG]|[NA]};{[QG]|[NA]}EHEAGAQ{[QG]|[NA]};[AG]ADHEAGAQ{[QG]|[NA]} 6.2647;6.2183;6.0989;6.0981;5.9891;5.95;5.9324;5.9035;5.8865;5.7914 -;-;-;-;-;-;-;-;-;- 1752 1 2.051 52574.7 0.5099999904632568 130 3149 3280 HBL1_DMSO_200M_050219_1,3281 HBL1_DMSO_200M_050219_1,3281,EFIMDQQQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3284 13.838 149.0 130270.0 25 0 9816.9 -1 0 55 605.9456919141732 1814.8152463427195 3 606.2792846560478 MULTI CID FTMS 0 0 0 3283 215848.421875 0.320350468906502 25 -0.1592073440551757 1 3 NG 2 -1 9.464 0.0 0.0 0.52148 0.0 0.0 1121.5347658817611 519.1958712213499 1640.730637103111 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NG 0.52148 - 26 + 1 2.051 20818.5 1.0 131 3151 3283 HBL1_DMSO_200M_050219_1,3284 HBL1_DMSO_200M_050219_1,3284, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3285 13.852 800.0 51564.0 25 0 2974.4 -1 0 78 476.4690487134672 1901.8470889874689 4 476.4695922732353 MULTI CID FTMS 0 0 0 3283 65435.2109375 0.7839726828004454 -2 0.020054817199707 2 3 H 1 -1 13.495 0.0 0.0 0.70957 0.0 0.0 1746.7769881347328 0.0 1746.7769881347328 0.0 -0.4845500650402812 -0.4845500650402812 0.0 0 0.0 0.0 0.0 0.0 H 0.70957 - 111 + 1 2.051 44175.9 0.4300000071525574 132 3151 3283 HBL1_DMSO_200M_050219_1,3285 HBL1_DMSO_200M_050219_1,3285, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3293 13.887 567.0 41049.0 25 0 2828.6 -1 0 59 563.2595211552514 1686.756734065954 3 563.2593871951103 MULTI CID FTMS 0 0 0 3292 119009.578125 0.3692378731166917 24 -0.1400127410888672 1 3 E 1 -1 11.42 0.0 0.0 0.67704 0.0 0.0 1539.7040282327494 0.0 1539.7040282327494 0.0 0.9354332167857216 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.67704 - 15 + 1 2.051 28416.3 1.0 133 3158 3292 HBL1_DMSO_200M_050219_1,3293 HBL1_DMSO_200M_050219_1,3293, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3296 13.908 800.0 38381.0 25 0 1974.5 -1 0 49 688.9702802895748 2063.8890114689243 3 688.9698974490166 MULTI CID FTMS 0 0 0 3295 33721.31640625 0.370792765211977 -2 0.0163850784301757 1 3 {[YC]|[HE]}QQH 5 -1 11.963 0.0 0.0 0.57962 0.0 0.0 0.0 1401.568612869568 1401.568612869568 4.973024840566467 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[YC]|[HE]}QQH 0.57962 - 13 1 2.051 31737.2 0.4099999964237213 134 3160 3295 HBL1_DMSO_200M_050219_1,3296 HBL1_DMSO_200M_050219_1,3296, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3310 13.971 800.0 35318.0 25 0 1725.1 -1 0 75 472.46521102196135 1885.8317382214448 4 472.7160827517509 MULTI CID FTMS 0 0 0 3309 27776.3515625 0.1289762601200372 30 -0.1762523651123047 1 3 [VP]E 3 -1 15.017 0.0 0.0 0.7963 0.0 0.0 0.0 1557.6451897197455 1557.6451897197455 0.6880034822597754 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [VP]E 0.7963 - 62 1 2.062 32372.0 0.5299999713897705 135 3173 3309 HBL1_DMSO_200M_050219_1,3310 HBL1_DMSO_200M_050219_1,3310, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3313 13.991 800.0 77842.0 25 0 4676.8 -1 0 96 634.9564022952225 1901.8473774858671 3 634.9565307497978 MULTI CID FTMS 0 0 0 3312 109078.9375 0.290924175164637 17 -0.1037769317626953 1 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GYYYQ 7 -1 16.003 0.0 0.0 0.84146 0.0 0.0 0.0 990.4566663865108 990.4566663865108 1.054841133351161 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GYYYQ 0.84146 - 332 1 2.062 55430.1 0.5699999928474426 136 3175 3312 HBL1_DMSO_200M_050219_1,3313 HBL1_DMSO_200M_050219_1,3313, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3326 14.051 800.0 49528.0 25 0 5941.6 -1 0 67 624.9527525038928 1871.8364281118784 3 624.9521972537041 MULTI CID FTMS 0 0 0 3325 53024.3515625 0.578660096297884 -5 0.0195465087890625 1 3 Q 1 -1 11.783 0.0 0.0 0.62947 0.0 0.0 1725.7672580452752 0.0 1725.7672580452752 0.0 10.188942804447 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.62947 - 7 + 1 2.067 36593.9 0.4799999892711639 137 3187 3325 HBL1_DMSO_200M_050219_1,3326 HBL1_DMSO_200M_050219_1,3326, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3331 14.079 800.0 30162.0 25 0 2281.7 + -1 FYCLFKCMRFY 11 63 550.9114051761458 1649.7123861286373 3 551.2457153201103 MULTI CID FTMS 0 0 0 3330 21895.310546875 0.2688099609512877 1 -0.0163373947143554 1 2 Carbamidomethyl (C),Oxidation (M) _FYC(Carbamidomethyl (C))LFKC(Carbamidomethyl (C))M(Oxidation (M))RFY_ REV__ENSG00000104043|ENST00000284509|ATP8B4;REV__ENST00000558906.5_1_15:50152393-50311102:-|nuORF;REV__ENST00000559726.5_1_15:50152393-50311102:-|nuORF;REV__ENST00000560161.1_1_15:50178110-50190397:-|nuORF;REV__ENST00000561385.5_1_15:50189347-50194027:-|nuORF 0.0948413911109767 0.8747004676205551 3 D 1 -1 14.604 0.0 0.0 0.88525 0.0 0.0 1516.6749238257055 0.0 1516.6749238257055 0.0 0.6516688424750328 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.88525 - 19 + 1 2.067 26005.0 0.4799999892711639 138 3191 3330 HBL1_DMSO_200M_050219_1,3331 HBL1_DMSO_200M_050219_1,3331,FYCLFKCMRFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3333 14.092 608.0 85762.0 25 0 3879.6 + -1 GADAMAEVFNA 11 105 556.2412603772015 1110.4679678212028 2 556.2401611208916 MULTI CID FTMS 0 0 0 3332 99380.1015625 0.5090852647631751 12 -0.0562496185302734 1 Oxidation (M) _GADAM(Oxidation (M))AEVFNA_ REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1 29.081581746732265 0.4093582134107448 3 [AG]DAHEAQQ{[QG]|[NA]} 11 -1 + 81.405 0.0 0.0 7.3307 7.3307 90.918 0.0 0.0 0.0 10.00214989947584 7.367585652254192 7.367585652254192 9.128498242811006 0 0.5 2.0 1.6976212463643423 0.0 [AG]DAHEAQQ{[QG]|[NA]};[AG]DAHEA[AG]Q{[QG]|[NA]};[AG]DAHEAQ[AG]{[QG]|[NA]};[AG]ADHEAQQ{[QG]|[NA]};{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQ{[QG]|[NA]};{[DA]|[EG]}GAHEAQQ{[QG]|[NA]};[AG]GEHEAQQ{[QG]|[NA]};{[DA]|[EG]}QHEAQQ{[QG]|[NA]};[AG]AHDEAQQ{[QG]|[NA]};[AG]DAHEA[AG][AG]{[QG]|[NA]} 7.3307;6.5087;6.5087;6.4957;6.43;6.3337;6.2498;6.1607;6.1298;5.6894 -;-;-;-;-;-;-;-;-;- 1189 1 2.067 43831.4 1.0 139 3192 3332 HBL1_DMSO_200M_050219_1,3333 HBL1_DMSO_200M_050219_1,3333,GADAMAEVFNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3349 14.163 800.0 21541.0 25 0 1691.1 -1 0 47 605.9462337160767 0 605.9465209841728 PEAK CID FTMS 0 0 0 3348 60777.0078125 0.8841769022779942 4 -0.028304100036621 1 3 Q 1 -1 9.6041 0.0 0.0 0.79381 0.0 0.0 388.5388164538345 690.2598788246232 1078.7986952784577 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 Q 0.79381 - 8 + 1 2.067 22643.6 0.4600000083446502 140 3207 3348 HBL1_DMSO_200M_050219_1,3349 HBL1_DMSO_200M_050219_1,3349, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3360 14.215 800.0 15573.0 25 0 1622.6 -1 0 33 541.0346302939395 2160.1094153093577 4 541.2861205935478 MULTI CID FTMS 0 0 0 -1 0 1 3 H 1 -1 15.485 0.0 0.0 0.71684 0.0 0.0 2005.0400468784967 0.0 2005.0400468784967 0.0 15.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.71684 - 7 + 1 2.073 22646.9 0.4399999976158142 141 3217 3359 HBL1_DMSO_200M_050219_1,3360 HBL1_DMSO_200M_050219_1,3360, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3365 14.238 530.0 27766.0 25 0 3087.4 -1 0 39 634.9564022952225 1901.8473774858671 3 634.9564697146416 MULTI CID FTMS 0 0 0 3364 54444.4609375 0.1452086924712251 63 -0.4302740097045898 1 3 A 1 -1 3.9794 0.0 0.0 0.20924 0.0 0.0 1279.5718780735608 548.2254122369749 1827.797290310536 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.20924 - 24 + 1 2.073 22882.8 1.0 142 3221 3364 HBL1_DMSO_200M_050219_1,3365 HBL1_DMSO_200M_050219_1,3365, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3368 14.259 800.0 55229.0 25 0 7295.1 -1 0 81 452.95045571128327 1807.772716978733 4 452.9509155154228 MULTI CID FTMS 0 0 0 3367 108472.671875 1.0 0 0.0 1 3 CG 2 -1 20.969 0.0 0.0 1.1599 0.0 0.0 0.0 1644.7065364199916 1644.7065364199916 2.1433312410781724 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 CG 1.1599 - 265 + 1 2.073 46197.5 0.4799999892711639 143 3223 3367 HBL1_DMSO_200M_050219_1,3368 HBL1_DMSO_200M_050219_1,3368, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3372 14.283 800.0 12216.0 25 0 1515.8 -1 0 27 588.2564548970728 2936.245892152364 5 588.4572631716728 MULTI CID FTMS 0 0 0 3371 21062.552734375 0.3340463292352873 1 -0.016275405883789 1 3 G 1 -1 5.4846 0.0 0.0 0.18679 0.0 0.0 2491.0439095857605 385.1544283502563 2876.1983379360167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.18679 - 6 + 1 2.073 18538.2 0.4099999964237213 144 3226 3371 HBL1_DMSO_200M_050219_1,3372 HBL1_DMSO_200M_050219_1,3372, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3375 14.3 638.0 209740.0 25 0 19215.0 42456 VTGILKLRHI 10 114 383.92009931746 1148.73846855258 3 383.9198791384697 MULTI CID FTMS 0 0 0 3374 95549.71875 0.7113196139004583 -2 0.0200424194335937 1 Unmodified _VTGILKLRHI_ ENST00000476679.5_1_X:153641063-153647973:+|nuORF 3.5870582119611467 0.710044248540513 3 V 1 9 13.979 0.0 0.0 1.2169 0.0 0.0 1031.6590369503324 0.0 1031.6590369503324 0.0 2.0482152761569488 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2169 + + 38 + 1 2.073 110118.9 1.0 145 3228 3374 HBL1_DMSO_200M_050219_1,3375 HBL1_DMSO_200M_050219_1,3375,VTGILKLRHI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 3376 14.31 586.0 62708.0 25 0 3220.6 + + -1 VPERHGTTHGQTGD 14 82 497.9031581164876 1490.6876449496629 3 497.9033691287041 MULTI CID FTMS 0 0 0 3374 91159.703125 0.6029305822110799 -8 0.0637521743774414 2 Oxidation (M) _VEM(Oxidation (M))WREFTYKS_ Q5D862;ENSG00000143520|ENST00000388718|FLG2 2.0839675508343545 0.8653156407712262 3 TGD 3 -1 25.802 0.0 0.0 1.7309 0.0 0.0 1199.5805110158722 0.0 1199.5805110158722 0.0 6.593793813122062 0.0 0.0 0 0.5 0.0 0.0 0.0 TGD 1.7309 - 61 + 1 2.073 35649.4 1.0 146 3228 3374 HBL1_DMSO_200M_050219_1,3376 HBL1_DMSO_200M_050219_1,3376,VEMWREFTYKS False False VPERHGTTHGQTGD 14.310351 497.903369128704 1149029.875 3374.0 Q5D862;;ENSG00000143520|ENST00000388718|FLG2 2.4894190629323325 3.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3379 14.331 800.0 64693.0 25 0 1859.7 -1 0 60 716.5150841641138 3577.5390384875686 5 716.7163574099541 MULTI CID FTMS 0 0 0 3378 110606.4375 0.8201666955742843 -7 0.0719442367553711 1 3 GH 2 -1 9.464 0.0 0.0 0.26454 0.0 0.0 1972.8168858342367 1407.588682933599 3380.4055687678365 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GH 0.26454 - 12 + 1 2.073 46574.7 0.5199999809265137 147 3230 3378 HBL1_DMSO_200M_050219_1,3379 HBL1_DMSO_200M_050219_1,3379, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3382 14.351 800.0 72384.0 25 0 2943.4 + -1 GADAMAEVFNA 11 119 556.2412603772015 1110.4679678212028 2 556.2406494021416 MULTI CID FTMS 0 0 0 3381 114754.34375 0.5878414748243446 52 -0.3225612640380859 1 Oxidation (M) _GADAM(Oxidation (M))AEVFNA_ REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1 22.736283301280096 0.5583477779825423 3 [AG]AHDEAGAQGQ 12 -1 + 67.226 0.0 0.0 6.0538 6.0538 76.234 0.0 0.0 0.0 1.93719655984016 8.51703302909064 1.93719655984016 0.2788676796658222 0 0.5317183090963749 1.6989700043360187 1.079689690656103 0.0 [AG]AHDEAGAQGQ;[AG]AHDEAQQGQ;[AG]DAHEAGAQGQ;[AG]DAHEAQQGQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQGQ;[AG]AHDEQAQGQ;[QA]HDEAGAQGQ;[AG]DAHEQAQGQ;{[DA]|[EG]}QHEAGAQGQ;[AG]ADHEAGAQGQ 6.0538;6.0287;5.958;5.9329;5.8794;5.8013;5.7142;5.7054;5.6106;5.4244 -;-;-;-;-;-;-;-;-;- 1975 1 2.073 47806.2 0.5099999904632568 148 3232 3381 HBL1_DMSO_200M_050219_1,3382 HBL1_DMSO_200M_050219_1,3382,GADAMAEVFNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3383 14.365 800.0 55222.0 25 0 3727.1 -1 0 80 607.9423574126448 1820.8052428381343 3 607.9426147341728 MULTI CID FTMS 0 0 0 3381 81095.859375 0.8973697635232829 -1 0.0037670135498046 2 3 SGE 3 -1 34.297 0.0 0.0 1.8836 0.0 0.0 1529.6984140801248 0.0 1529.6984140801248 0.0 21.532621531037 0.0 0.0 0 0.0 0.0 0.9604093769761876 0.0 SGE 1.8836 - 89 + 1 2.073 40510.1 0.449999988079071 149 3232 3381 HBL1_DMSO_200M_050219_1,3383 HBL1_DMSO_200M_050219_1,3383, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3388 14.393 800.0 59569.0 25 0 34242.0 + -1 HQPCRISEVH 10 51 631.8038220468546 0 631.8044311404228 PEAK CID FTMS 0 0 0 3387 80484.9375 0.7283898384176503 24 -0.1343374252319336 1 Carbamidomethyl (C) _HQPC(Carbamidomethyl (C))RISEVH_ REV__ENST00000262376.10_1_16:4931488-4931788:+|nuORF 1.4819007175156935 0.3961065659209837 3 R 1 -1 3.9794 0.0 0.0 0.31543 0.0 0.0 583.2789564942967 519.1858004205686 1102.4647569148651 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.31543 + + 1 + 1 2.073 39445.8 0.4799999892711639 150 3236 3387 HBL1_DMSO_200M_050219_1,3388 HBL1_DMSO_200M_050219_1,3388,HQPCRISEVH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3391 14.413 800.0 133120.0 25 0 16843.0 + 11967 GPEAGRKPA 9 110 441.7432785561999 881.4720041791998 2 441.7427551150322 MULTI CID FTMS 0 0 0 3390 98507.0546875 0.027695672695878 -80 0.5220584869384766 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 55.50274090549119 0.0285720310785888 3 GPEAS 5 5 76.058 0.0 0.0 8.6285 0.0 0.0 0.0 437.267988660185 437.267988660185 47.235293763427535 0.0 0.0 0.0 0 1.610924374808178 2.0 0.5 0.0 GPEAS 8.6285 - 255 + 1 2.073 86529.2 0.5600000023841858 151 3238 3390 HBL1_DMSO_200M_050219_1,3391 HBL1_DMSO_200M_050219_1,3391,GPEAGRKPA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3404 14.473 800.0 213630.0 25 0 11814.0 -1 0 256 303.1707232220548 302.1634467554548 1 303.1698486208916 MULTI CID FTMS 0 0 0 3403 67409.875 0.54165020920334 -51 0.3409786224365234 1 3 K 1 -1 12.681 0.0 0.0 4.1966 0.0 0.0 156.05834224060948 0.0 156.05834224060948 0.0 0.4621629584079656 0.0 0.0 0 0.0 0.0 0.0 0.1421590589602531 K 4.1966 - 45 + 1 2.08 134129.8 0.5199999809265137 152 3250 3403 HBL1_DMSO_200M_050219_1,3404 HBL1_DMSO_200M_050219_1,3404, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3407 14.484 262.0 361080.0 25 0 53125.0 + 23309 LTAEVLKQL 9 84 338.87709277120314 1013.6094489138096 3 338.8767272830009 MULTI CID FTMS 0 0 0 3406 327522.75 0.6094366335756257 -30 0.2382278442382812 1 Unmodified _LTAEVLKQL_ ENSG00000198796|ENST00000361673|ALPK2 34.93206674587334 0.1032771302489716 3 {I|L}TA{[QV]|[N{I|L}]|[RA]|[KV]}K 6 4 59.754 0.0 0.0 5.8952 0.0 0.0 0.0 370.18488489322505 370.18488489322505 43.55651869704872 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 1.2302046884880935 {I|L}TA{[QV]|[N{I|L}]|[RA]|[KV]}K 5.8952 - 62 + 1 2.08 81107.2 1.0 153 3252 3406 HBL1_DMSO_200M_050219_1,3407 HBL1_DMSO_200M_050219_1,3407,LTAEVLKQL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3426 14.567 800.0 52057.0 25 0 2894.0 + -1 VFRNHQSMWRD 11 80 497.9031581164876 1490.6876449496629 3 497.9034301638603 MULTI CID FTMS 0 0 0 3425 73614.71875 0.4868879967103601 34 -0.2201128005981445 1 Oxidation (M) _VFRNHQSM(Oxidation (M))WRD_ REV__ENSG00000168092|ENST00000527958|PAFAH1B2;REV__ENST00000533206.1_1_11:117023163-117034692:+|nuORF;REV__nc|ENSG00000168092|P68402-2|PAFAH1B2;REV__nc|ENSG00000168092|P68402-3|PAFAH1B2;REV__nc|ENSG00000168092|P68402-4|PAFAH1B2 2.434785330301024 0.8636604596255422 3 TGD 3 -1 26.427 0.0 0.0 1.7728 0.0 0.0 1199.5800532522003 0.0 1199.5800532522003 0.0 5.981362441963327 0.0 0.0 0 0.5 0.0 0.0 0.0 TGD 1.7728 - 41 + 1 2.08 37449.5 0.5 154 3270 3425 HBL1_DMSO_200M_050219_1,3426 HBL1_DMSO_200M_050219_1,3426,VFRNHQSMWRD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3429 14.587 800.0 31691.0 25 0 2483.8 -1 0 41 716.5150841641138 3577.5390384875686 5 716.9161865115166 MULTI CID FTMS 0 0 0 3428 30994.0859375 0.1808812439417385 37 -0.24188232421875 1 3 D 1 -1 3.4949 0.0 0.0 0.097689 0.0 0.0 2759.183766126044 700.286418289571 3459.4701844156148 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.097689 - 1 + 1 2.08 26884.0 0.4399999976158142 155 3272 3428 HBL1_DMSO_200M_050219_1,3429 HBL1_DMSO_200M_050219_1,3429, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3437 14.627 800.0 16251.0 25 0 1570.1 -1 0 40 574.7626279198712 2295.0214058130846 4 575.2655517458916 MULTI CID FTMS 0 0 0 3436 17258.126953125 0.1091004865822675 -7 0.0397214889526367 1 3 {[CA]|SS}A 3 -1 10.458 0.0 0.0 0.45566 0.0 0.0 0.0 2046.898379650252 2046.898379650252 7.358631114164781 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[CA]|SS}A 0.45566 - 14 1 2.091 23007.7 0.4799999892711639 156 3279 3436 HBL1_DMSO_200M_050219_1,3437 HBL1_DMSO_200M_050219_1,3437, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3438 14.641 800.0 28605.0 25 0 9316.5 -1 0 40 613.7870629826125 2451.11914606405 4 614.0400878787041 MULTI CID FTMS 0 0 0 3436 80334.296875 1.0 0 0.0 2 3 SADSS 5 -1 23.984 0.0 0.0 0.97851 0.0 0.0 1528.7159000697122 472.226944208017 2000.942844277729 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 SADSS 0.97851 - 35 + 1 2.091 27587.6 0.4799999892711639 157 3279 3436 HBL1_DMSO_200M_050219_1,3438 HBL1_DMSO_200M_050219_1,3438, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3442 14.653 29.0 1574600.0 25 0 240620.0 + 11968 GPEAGRKPA 9 53 441.7432785561999 881.4720041791998 2 441.7430908083916 MULTI CID FTMS 0 0 0 3441 2045738.375 0.5751679474646498 -36 0.2074766159057617 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 39.94969957227396 0.0757326808254658 3 GPEA 4 5 68.8 0.0 0.0 7.8051 0.0 0.0 0.0 524.2946690706552 524.2946690706552 57.830918867322296 0.0 0.0 0.0 0 1.305462187404089 2.0 0.3807196863200844 0.0 + GPEA 7.8051 + + 39 + 1 2.091 43273.8 1.0 158 3282 3441 HBL1_DMSO_200M_050219_1,3442 HBL1_DMSO_200M_050219_1,3442,GPEAGRKPA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3446 14.677 800.0 24278.0 25 0 689.42 -1 0 49 766.0144124455151 2295.021407936745 3 766.3499633669853 MULTI CID FTMS 0 0 0 3445 62980.6640625 0.6003436056324812 -10 0.0661945343017578 1 3 S{[YC]|[HE]} 3 -1 10.458 0.0 0.0 0.45566 0.0 0.0 1923.878965165064 0.0 1923.878965165064 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 S{[YC]|[HE]} 0.45566 - 29 + 1 2.091 22658.5 0.4699999988079071 159 3285 3445 HBL1_DMSO_200M_050219_1,3446 HBL1_DMSO_200M_050219_1,3446, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3461 14.735 206.0 419820.0 25 0 68148.0 + 23310 LTAEVLKQL 9 86 338.87709277120314 1013.6094489138096 3 338.8768798708916 MULTI CID FTMS 0 0 0 3460 334793.71875 0.6229660592959263 17 -0.1115579605102539 1 Unmodified _LTAEVLKQL_ ENSG00000198796|ENST00000361673|ALPK2 34.93206674587334 0.1032771302489716 3 {I|L}TARAK 6 5 64.385 0.0 0.0 6.3521 0.0 0.0 0.0 370.18488489322505 370.18488489322505 53.4163750790475 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 1.274227503252014 {I|L}TARAK 6.3521 - 64 + 1 2.1 70979.4 1.0 160 3299 3460 HBL1_DMSO_200M_050219_1,3461 HBL1_DMSO_200M_050219_1,3461,LTAEVLKQL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3464 14.755 800.0 221640.0 25 0 15009.0 -1 0 253 303.1707232220548 302.1634467554548 1 303.1698486208916 MULTI CID FTMS 0 0 0 3463 124452.78125 1.0 0 0.0 1 3 P 1 -1 12.764 0.0 0.0 4.2243 0.0 0.0 187.09979274109776 0.0 187.09979274109776 0.0 0.2899597348884342 0.0 0.0 0 0.0 0.0 0.0 0.0 P 4.2243 - 40 + 1 2.1 140807.5 0.4799999892711639 161 3301 3463 HBL1_DMSO_200M_050219_1,3464 HBL1_DMSO_200M_050219_1,3464, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3465 14.763 457.0 159400.0 25 0 62096.0 + 7346 EFYNKWYPR 9 55 434.8819235238004 0 434.8819152712822 PEAK CID FTMS 0 0 0 3463 219568.0 0.8025973987402987 -190 1.2043390274047852 2 Unmodified _EFYNKWYPR_ REV__ENSG00000138175|ENST00000260746|ARL3 0.5247636613948944 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.1 62700.5 1.0 162 3301 3463 HBL1_DMSO_200M_050219_1,3465 HBL1_DMSO_200M_050219_1,3465,EFYNKWYPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3470 14.791 800.0 38038.0 25 0 3515.5 -1 0 73 553.0044668466974 2207.9887615203893 4 553.2558471560478 MULTI CID FTMS 0 0 0 3469 108910.1953125 0.3850860152654279 -18 0.0934391021728515 1 3 {[DA]|[EG]}S 3 -1 24.922 0.0 0.0 1.1287 0.0 0.0 0.0 1931.869778936658 1931.869778936658 1.5000655322351264 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.0 {[DA]|[EG]}S 1.1287 - 263 1 2.107 32080.4 0.550000011920929 163 3305 3469 HBL1_DMSO_200M_050219_1,3470 HBL1_DMSO_200M_050219_1,3470, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3474 14.813 657.0 26360.0 25 0 2877.6 -1 0 47 737.0036993229303 2207.9892685689906 3 737.0033447146416 MULTI CID FTMS 0 0 0 3473 43977.25390625 0.3179118574006164 -17 0.1017494201660156 1 3 {[SA]|[TG]}GSS 5 -1 22.218 0.0 0.0 1.0063 0.0 0.0 0.0 1815.812302586822 1815.812302586822 15.228787452803374 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[SA]|[TG]}GSS 1.0063 - 96 1 2.107 21538.3 1.0 164 3308 3473 HBL1_DMSO_200M_050219_1,3474 HBL1_DMSO_200M_050219_1,3474, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3491 14.888 800.0 61782.0 25 0 2484.6 + -1 SPKWQWEDMFI 11 81 741.8371834240899 1481.6598139149796 2 741.8377563357353 MULTI CID FTMS 0 0 0 3490 74257.59375 0.4520075901357149 -18 0.0804481506347656 1 Oxidation (M) _SPKWQWEDM(Oxidation (M))FI_ REV__ENSG00000142185|ENST00000397928|TRPM2;REV__nc|ENSG00000142185|O94759-2|TRPM2;REV__nc|ENSG00000142185|O94759-3|TRPM2 5.296884461304476 0.8501568894076437 3 [PG]S 3 -1 22.676 0.0 0.0 1.5304 0.0 0.0 0.0 1237.530974153514 1237.530974153514 6.772784618495621 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [PG]S 1.5304 - 190 1 2.107 37684.2 0.4600000083446502 165 3324 3490 HBL1_DMSO_200M_050219_1,3491 HBL1_DMSO_200M_050219_1,3491,SPKWQWEDMFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3494 14.908 800.0 25363.0 25 0 2979.9 -1 0 50 589.0182963832567 2352.0440796666267 4 589.2686035037041 MULTI CID FTMS 0 0 0 3493 53512.84375 0.1623647490606533 -21 0.1169261932373046 1 3 R 1 -1 1.2591 0.0 0.0 0.05353 0.0 0.0 1853.822535332445 339.0921419733032 2192.9146773057487 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.05353 - 21 + 1 2.107 25069.4 0.449999988079071 166 3326 3493 HBL1_DMSO_200M_050219_1,3494 HBL1_DMSO_200M_050219_1,3494, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3495 14.922 800.0 9108.2 25 0 1547.4 24535 MKEMSSLFPED 11 20 657.2908099904519 0 657.2903930544853 PEAK CID FTMS 0 0 0 3493 69509.2109375 0.9909516363627048 -7 0.0399808883666992 2 Unmodified _MKEMSSLFPED_ ENSG00000126773|ENST00000406854|PCNX4;ENST00000483571.5_1_14:60582139-60592559:+|nuORF 1.1933415558491238 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.107 18641.1 0.4399999976158142 167 3326 3493 HBL1_DMSO_200M_050219_1,3495 HBL1_DMSO_200M_050219_1,3495,MKEMSSLFPED False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3497 14.926 21.0 2198900.0 25 0 316410.0 + 11969 GPEAGRKPA 9 61 441.7432785561999 881.4720041791998 2 441.7431213259697 MULTI CID FTMS 0 0 0 3496 2791017.5 0.7847063077227155 9 -0.0747900009155273 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 39.94969957227396 0.0757326808254658 3 GPEA 4 5 64.68 0.0 0.0 7.3378 0.0 0.0 0.0 524.2945266621903 524.2945266621903 47.99803764475705 0.0 0.0 0.0 0 1.274227503252014 2.0 0.0 0.0 + GPEA 7.3378 + + 70 + 1 2.111 42560.0 1.0 168 3327 3496 HBL1_DMSO_200M_050219_1,3497 HBL1_DMSO_200M_050219_1,3497,GPEAGRKPA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3503 14.958 800.0 51460.0 25 0 18904.0 -1 0 33 990.8523957139 0 990.8521606326104 PEAK CID FTMS 0 0 0 3502 61988.8515625 0.5070657519777587 -14 0.0942525863647461 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.111 39640.4 0.4300000071525574 169 3332 3502 HBL1_DMSO_200M_050219_1,3503 HBL1_DMSO_200M_050219_1,3503, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3507 14.983 800.0 20074.0 25 0 1937.5 -1 0 37 785.0213208811731 2352.042133243719 3 785.3564941287041 MULTI CID FTMS 0 0 0 3506 41534.875 0.2849377350691937 -12 0.0988302230834961 1 3 A 1 -1 11.99 0.0 0.0 0.50976 0.0 0.0 1758.7643144954752 519.2039278619749 2277.96824235745 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 A 0.50976 - 15 + 1 2.111 23516.2 0.4300000071525574 170 3335 3506 HBL1_DMSO_200M_050219_1,3507 HBL1_DMSO_200M_050219_1,3507, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3508 14.996 800.0 42801.0 25 0 2957.1 -1 0 79 610.7760755176176 2439.0751962040704 4 611.0256835818291 MULTI CID FTMS 0 0 0 3506 67796.125 0.1791759187544051 -12 0.0988302230834961 2 3 N 1 -1 6.9897 0.0 0.0 0.28657 0.0 0.0 1820.813246596452 501.2071016901001 2322.020348286552 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.28657 - 57 + 1 2.111 40566.7 0.4300000071525574 171 3335 3506 HBL1_DMSO_200M_050219_1,3508 HBL1_DMSO_200M_050219_1,3508, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3517 15.04 800.0 32998.0 25 0 2379.2 -1 0 59 814.0322746345803 2439.0749945039406 3 814.3680297732353 MULTI CID FTMS 0 0 0 3516 78988.734375 0.4236141417472955 -24 0.1722755432128906 1 3 P[C(Carbamidomethyl (C))M] 3 -1 10.458 0.0 0.0 0.42875 0.0 0.0 2032.8932799116435 0.0 2032.8932799116435 0.0 3.4678748622465623 0.0 0.0 0 0.0 0.0 0.0 0.0 P[C(Carbamidomethyl (C))M] 0.42875 - 11 1 2.111 27496.3 0.5 172 3343 3516 HBL1_DMSO_200M_050219_1,3517 HBL1_DMSO_200M_050219_1,3517, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3523 15.072 800.0 17288.0 25 0 1262.5 -1 0 42 553.0044668466974 2207.9887615203893 4 553.2563964724541 MULTI CID FTMS 0 0 0 3522 20543.32421875 0.0726373397917892 25 -0.2284231185913086 1 3 {[DA]|[EG]}G 3 -1 20.501 0.0 0.0 0.92851 0.0 0.0 0.0 1961.880200689588 1961.880200689588 4.303556944260336 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[DA]|[EG]}G 0.92851 - 79 1 2.111 19629.8 0.4900000095367431 173 3348 3522 HBL1_DMSO_200M_050219_1,3523 HBL1_DMSO_200M_050219_1,3523, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3530 15.103 499.0 15796.0 25 0 1049.9 -1 0 29 574.7627075165204 2295.0217241996816 4 575.0138427615166 MULTI CID FTMS 0 0 0 3529 83650.9921875 0.9273203779769564 -1 0.003814697265625 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.111 16927.0 1.0 174 3354 3529 HBL1_DMSO_200M_050219_1,3530 HBL1_DMSO_200M_050219_1,3530, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3540 15.15 800.0 63389.0 25 0 2398.9 + 27095 PFGPNWEMWRY 11 75 741.8372187729753 1481.6598846127506 2 741.8379394412041 MULTI CID FTMS 0 0 0 3539 90897.109375 0.6977471224332306 -6 0.0234241485595703 1 Unmodified _PFGPNWEMWRY_ REV__ENSG00000012779|ENST00000374391|ALOX5;REV__nc|ENSG00000012779|P09917-2|ALOX5;REV__nc|ENSG00000012779|P09917-3|ALOX5;REV__nc|ENSG00000012779|P09917-4|ALOX5;REV__nc|ENSG00000012779|P09917-5|ALOX5 5.296884461304476 0.8501568894076437 3 [PG]S 3 -1 25.731 0.0 0.0 1.7366 0.0 0.0 0.0 1237.530999074918 1237.530999074918 11.126590506049324 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3054621874040891 0.0 [PG]S 1.7366 - 120 1 2.111 43394.2 0.5 175 3363 3539 HBL1_DMSO_200M_050219_1,3540 HBL1_DMSO_200M_050219_1,3540,PFGPNWEMWRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3541 15.164 800.0 213780.0 25 0 14134.0 + 1715 ALPPEARGP 9 245 303.1701913139224 0 303.1703063845634 PEAK CID FTMS 0 0 0 3539 103699.3671875 0.8104154430215903 -48 0.2979688644409179 2 Unmodified _ALPPEARGP_ REV__ENST00000350199.8_1_9:36376122-36400677:-|nuORF 13.042465956692816 0.2773713495150148 3 P 1 -1 6.9897 0.0 0.0 1.1566 0.0 0.0 63.999361642952586 440.2509115745844 504.25027321753697 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.1566 + + 31 + 1 2.111 135851.0 0.5 176 3363 3539 HBL1_DMSO_200M_050219_1,3541 HBL1_DMSO_200M_050219_1,3541,ALPPEARGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3543 15.176 537.0 46572.0 25 0 7032.0 -1 0 60 589.0182963832567 2352.0440796666267 4 589.2691528201103 MULTI CID FTMS 0 0 0 3542 179383.28125 0.5442716066800851 17 -0.2163772583007812 1 3 NY 2 -1 7.0783 0.0 0.0 0.30094 0.0 0.0 1481.6552990043203 590.2509249322874 2071.906223936608 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NY 0.30094 - 83 + 1 2.111 28245.8 1.0 177 3364 3542 HBL1_DMSO_200M_050219_1,3543 HBL1_DMSO_200M_050219_1,3543, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3545 15.181 46.0 1076300.0 25 0 139060.0 + 11970 GPEAGRKPA 9 77 441.7432785561999 881.4720041791998 2 441.7431213259697 MULTI CID FTMS 0 0 0 3544 1317991.125 0.3705587475929686 47 -0.4601783752441406 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 47.74868867922204 0.0453060283459952 3 GPEAS 5 5 68.94 0.0 0.0 7.821 0.0 0.0 0.0 437.2654207818969 437.2654207818969 54.51544993495972 0.0 0.0 0.0 0 1.424742501084005 2.0 0.5 0.0 GPEAS 7.821 - 49 + 1 2.116 44638.7 1.0 178 3365 3544 HBL1_DMSO_200M_050219_1,3545 HBL1_DMSO_200M_050219_1,3545,GPEAGRKPA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3546 15.189 442.0 46401.0 25 0 1924.4 -1 0 56 512.7350605905374 2046.9111364957496 4 512.7355834841728 MULTI CID FTMS 0 0 0 3544 85106.6640625 0.5077753538482851 -8 0.0654220581054687 2 3 AN 2 -1 7.9588 0.0 0.0 0.38882 0.0 0.0 1362.6309984115685 496.18769251041255 1858.8186909219808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AN 0.38882 - 30 + 1 2.116 28206.8 1.0 179 3365 3544 HBL1_DMSO_200M_050219_1,3546 HBL1_DMSO_200M_050219_1,3546, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3547 15.203 800.0 12874.0 25 0 807.09 + -1 ELIDMDCKMIS 11 28 657.2910429048329 0 657.2924072146416 PEAK CID FTMS 0 0 0 3544 60327.7734375 0.8148632901104335 -13 0.0922765731811523 3 Oxidation (M) _ELIDMDCKM(Oxidation (M))IS_ REV__ENST00000441772.1_1_11:1824121-1824694:-|nuORF 0.9622753412299312 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.116 20530.5 0.3199999928474426 180 3365 3544 HBL1_DMSO_200M_050219_1,3547 HBL1_DMSO_200M_050219_1,3547,ELIDMDCKMIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3549 15.219 800.0 117290.0 25 0 51731.0 -1 ACGFDEYE 8 30 990.3506729768671 989.3433965102672 1 990.3508788943292 MULTI CID FTMS 0 0 0 3548 167625.6875 0.451584474953118 -24 0.1828584671020507 1 Carbamidomethyl (C) _AC(Carbamidomethyl (C))GFDEYE_ ENSG00000078549|ENST00000304166|ADCYAP1R1;nc|ENSG00000078549|P41586-2|ADCYAP1R1;nc|ENSG00000078549|P41586-3|ADCYAP1R1;nc|ENSG00000078549|P41586-4|ADCYAP1R1;nc|ENSG00000078549|P41586-5|ADCYAP1R1 0.7936320650641473 0.8195151834710337 3 C 1 -1 0.48455 0.0 0.0 0.048977 0.0 0.0 683.2482865022578 200.0570009820922 883.30528748435 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.048977 + + 8 + 1 2.116 74701.6 0.9300000071525574 181 3366 3548 HBL1_DMSO_200M_050219_1,3549 HBL1_DMSO_200M_050219_1,3549,ACGFDEYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3552 15.239 800.0 64912.0 25 0 3529.5 -1 PYRCHWCKYRH 11 85 416.4424393249741 1661.7406514334964 4 416.4419738650322 MULTI CID FTMS 0 0 0 3551 47308.20703125 0.6948139069938861 1 -0.0163516998291015 1 2 Carbamidomethyl (C) _PYRC(Carbamidomethyl (C))HWC(Carbamidomethyl (C))KYRH_ ENSG00000221866|ENST00000321063|PLXNA4 0.0948413911109767 0.8747004676205551 3 H 1 -1 12.218 0.0 0.0 0.73528 0.0 0.0 1506.6709015329088 0.0 1506.6709015329088 0.0 0.7133375178436552 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.73528 + + 119 + 1 2.116 53538.3 0.4199999868869781 182 3368 3551 HBL1_DMSO_200M_050219_1,3552 HBL1_DMSO_200M_050219_1,3552,PYRCHWCKYRH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3554 15.246 237.0 140250.0 25 0 9163.9 -1 0 79 610.7762764350289 2439.075999873716 4 611.0270873904228 MULTI CID FTMS 0 0 0 3553 371023.15625 0.7623437628318841 1 -0.0069150924682617 1 3 CGSQG 5 -1 23.443 0.0 0.0 0.96116 0.0 0.0 680.2878362545922 1323.5832029021112 2003.8710391567035 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 CGSQG 0.96116 - 192 + 1 2.116 35735.1 1.0 183 3369 3553 HBL1_DMSO_200M_050219_1,3554 HBL1_DMSO_200M_050219_1,3554, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3558 15.27 800.0 50989.0 25 0 5210.2 -1 0 61 410.3893876516635 2046.9105559253176 5 410.5898010134697 MULTI CID FTMS 0 0 0 3557 70286.4453125 0.9508821538657964 1 -0.0301227569580078 1 3 [YV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}G 5 -1 26.778 0.0 0.0 1.3082 0.0 0.0 0.0 1430.6422203142429 1430.6422203142429 12.17371328289893 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}G 1.3082 - 39 1 2.116 41306.3 0.4600000083446502 184 3372 3557 HBL1_DMSO_200M_050219_1,3558 HBL1_DMSO_200M_050219_1,3558, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3559 15.284 800.0 9104.6 25 0 951.64 -1 0 22 785.0213208811731 2352.042133243719 3 785.3551513552666 MULTI CID FTMS 0 0 0 3557 89455.6875 0.6136843071107735 25 -0.2587137222290039 2 3 K 1 -1 6.9897 0.0 0.0 0.29718 0.0 0.0 1701.7279699598678 519.1898287408811 2220.917798700749 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.29718 - 3 + 1 2.116 16215.0 0.4600000083446502 185 3372 3557 HBL1_DMSO_200M_050219_1,3559 HBL1_DMSO_200M_050219_1,3559, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3561 15.3 800.0 34428.0 25 0 2876.0 -1 0 58 814.0322746345803 2439.0749945039406 3 814.0319702029228 MULTI CID FTMS 0 0 0 3560 99068.6484375 0.5214967095928877 5 -0.0581922531127929 1 3 N[C(Carbamidomethyl (C))M] 3 -1 10.458 0.0 0.0 0.42875 0.0 0.0 2015.8755846880151 0.0 2015.8755846880151 0.0 2.498774732166 0.0 0.0 0 0.0 0.0 0.0 0.0 N[C(Carbamidomethyl (C))M] 0.42875 - 35 1 2.116 27122.7 0.4399999976158142 186 3373 3560 HBL1_DMSO_200M_050219_1,3561 HBL1_DMSO_200M_050219_1,3561, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3565 15.325 800.0 101520.0 25 0 12051.0 -1 0 39 992.82255627407 0 992.8322021365166 PEAK CID FTMS 0 0 0 3564 87158.65625 1.0 0 0.0 1 3 A 1 -1 5.4846 0.0 0.0 0.27649 0.0 0.0 1256.5467105932585 653.0318087213499 1909.5785193146085 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.27649 - 1 + 1 2.116 63396.0 0.449999988079071 187 3376 3564 HBL1_DMSO_200M_050219_1,3565 HBL1_DMSO_200M_050219_1,3565, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3566 15.338 800.0 67422.0 25 0 4490.7 -1 CCRWCCCCGER 11 32 803.7630870019252 0 803.7635375857353 PEAK CID FTMS 0 0 0 3564 66983.09375 0.9870730559705536 1 -0.0301752090454101 2 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))RWC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CGER_ ENSG00000011021|ENST00000346436|CLCN6;nc|ENSG00000011021|P51797-2|CLCN6;nc|ENSG00000011021|P51797-3|CLCN6;nc|ENSG00000011021|P51797-4|CLCN6;nc|ENSG00000011021|P51797-5|CLCN6;nc|ENSG00000011021|P51797-6|CLCN6 0.0 0.4761840153648598 3 M 1 -1 2.4743 0.0 0.0 0.15411 0.0 0.0 675.1145533425238 796.3285616510374 1471.4431149935613 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.15411 - 1 + 1 2.116 47236.0 0.4199999868869781 188 3376 3564 HBL1_DMSO_200M_050219_1,3566 HBL1_DMSO_200M_050219_1,3566,CCRWCCCCGER False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3571 15.366 800.0 55510.0 25 0 9927.2 -1 0 40 606.7856587626264 2423.1135291841056 4 607.0374023318291 MULTI CID FTMS 0 0 0 3570 48550.8515625 0.6121849904219712 1 -0.0301742553710937 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.123 42235.4 0.5 189 3380 3570 HBL1_DMSO_200M_050219_1,3571 HBL1_DMSO_200M_050219_1,3571, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3572 15.38 800.0 43956.0 25 0 1784.7 + -1 PGMKMINQFQE 11 65 677.8076478539168 1353.6007427746335 2 677.8072997927666 MULTI CID FTMS 0 0 0 3570 81594.734375 0.7356269393703225 -25 0.247598648071289 2 2 Oxidation (M) _PGM(Oxidation (M))KM(Oxidation (M))INQFQE_ REV__ENSG00000100883|ENST00000216774|SRP54;REV__ENST00000553923.1_1_14:35483969-35488318:+|nuORF;REV__ENST00000556445.1_1_14:35487839-35488318:+|nuORF;REV__nc|ENSG00000100883|P61011-2|SRP54 9.38312468134398 0.8308777417566128 3 [PG]S[NG]SGQ 8 -1 34.703 0.0 0.0 2.5637 0.0 0.0 0.0 666.2942601909023 666.2942601909023 23.733806366653027 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.2614393726401688 0.5 [PG]S[NG]SGQ 2.5637 - 296 1 2.123 33248.4 0.5 190 3380 3570 HBL1_DMSO_200M_050219_1,3572 HBL1_DMSO_200M_050219_1,3572,PGMKMINQFQE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3581 15.418 433.0 262250.0 25 0 201270.0 32231 RWHCQCKQDFN 11 47 488.8800086213456 0 488.8800842165947 PEAK CID FTMS 0 0 0 3580 193706.6875 0.5636796212535455 -266 1.7852964401245115 1 Unmodified _RWHCQCKQDFN_ ENSG00000169344|ENST00000396138|UMOD;nc|ENSG00000169344|P07911-2|UMOD;nc|ENSG00000169344|P07911-3|UMOD;nc|ENSG00000169344|P07911-4|UMOD;nc|ENSG00000169344|P07911-5|UMOD 0.3666738066901352 0.4761840153648598 3 A 1 11 6.9897 0.0 0.0 0.71634 0.0 0.0 557.7578009078647 343.9305819147094 901.688382822574 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.71634 - 1 + 1 2.123 90846.9 1.0 191 3388 3580 HBL1_DMSO_200M_050219_1,3581 HBL1_DMSO_200M_050219_1,3581,RWHCQCKQDFN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3582 15.432 800.0 180600.0 25 0 23834.0 + 42260 VSPGNGGP 8 163 342.66945891619457 683.3243648991892 2 342.6692077517509 MULTI CID FTMS 0 0 0 3580 93182.828125 0.3636227223890942 -276 1.8694486618041992 2 Unmodified _VSPGNGGP_ REV__ENSG00000144283|ENST00000389759|PKP4;REV__ENST00000480171.7_1_2:159519375-159537186:+|nuORF;REV__ENST00000486254.3_1_2:159526197-159533456:+|nuORF;REV__nc|ENSG00000144283|Q99569-2|PKP4 2.577480529830294 0.808687252328423 3 P 1 -1 10.713 0.0 0.0 1.5678 0.0 0.0 568.2606422202814 0.0 568.2606422202814 0.0 0.532276654571433 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.5678 + + 42 + 1 2.123 117717.3 0.5099999904632568 192 3388 3580 HBL1_DMSO_200M_050219_1,3582 HBL1_DMSO_200M_050219_1,3582,VSPGNGGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3583 15.445 800.0 39012.0 25 0 2231.0 + -1 KWCCFLFFFQ 10 66 741.8372187729753 1481.6598846127506 2 741.8372680544853 MULTI CID FTMS 0 0 0 3580 85961.1640625 0.6598576707007654 19 -0.156564712524414 3 2 Carbamidomethyl (C) _KWC(Carbamidomethyl (C))C(Carbamidomethyl (C))FLFFFQ_ REV__ENSG00000131808|ENST00000533718|FSHB 1.4819007175156935 0.719781833666733 3 [PG]S 3 -1 17.235 0.0 0.0 1.1632 0.0 0.0 0.0 1237.5306481227694 1237.5306481227694 5.452645340698496 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [PG]S 1.1632 - 36 1 2.123 28980.1 0.5 193 3388 3580 HBL1_DMSO_200M_050219_1,3583 HBL1_DMSO_200M_050219_1,3583,KWCCFLFFFQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3585 15.454 356.0 195330.0 25 0 27749.0 + 11971 GPEAGRKPA 9 76 441.7432785561999 881.4720041791998 2 441.7430602908134 MULTI CID FTMS 0 0 0 3584 194123.109375 0.0545785285836828 71 -0.4747285842895508 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 47.74868867922204 0.0453060283459952 3 GPEASV 6 5 75.75 0.0 0.0 8.5936 0.0 0.0 0.0 338.1932161920532 338.1932161920532 38.31546893236258 0.0 0.0 0.0 0 1.2614393726401687 2.0 0.5 0.0 GPEASV 8.5936 - 89 + 1 2.123 58556.3 1.0 194 3389 3584 HBL1_DMSO_200M_050219_1,3585 HBL1_DMSO_200M_050219_1,3585,GPEAGRKPA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3586 15.468 800.0 23476.0 25 0 1018.3 -1 0 53 512.7350605905374 2046.9111364957496 4 512.9857665896416 MULTI CID FTMS 0 0 0 3584 71408.0078125 0.3577649883204741 18 -0.1187629699707031 2 3 H 1 -1 15.485 0.0 0.0 0.75648 0.0 0.0 1891.8418291000448 0.0 1891.8418291000448 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.75648 - 16 + 1 2.123 24383.9 0.3600000143051147 195 3389 3584 HBL1_DMSO_200M_050219_1,3586 HBL1_DMSO_200M_050219_1,3586, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3588 15.477 353.0 244030.0 25 0 103340.0 -1 ACGFDEYE 8 27 990.3506729768671 989.3433965102672 1 990.3507568240166 MULTI CID FTMS 0 0 0 3587 371194.53125 1.0 0 0.0 1 Carbamidomethyl (C) _AC(Carbamidomethyl (C))GFDEYE_ ENSG00000078549|ENST00000304166|ADCYAP1R1;nc|ENSG00000078549|P41586-2|ADCYAP1R1;nc|ENSG00000078549|P41586-3|ADCYAP1R1;nc|ENSG00000078549|P41586-4|ADCYAP1R1;nc|ENSG00000078549|P41586-5|ADCYAP1R1 0.7936320650641473 0.8195151834710337 3 D 1 -1 5.5065 0.0 0.0 0.55658 0.0 0.0 701.2589383050175 170.03223596744377 871.2911742724613 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D 0.55658 + + 5 + 1 2.123 68569.1 1.0 196 3390 3587 HBL1_DMSO_200M_050219_1,3588 HBL1_DMSO_200M_050219_1,3588,ACGFDEYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3595 15.513 800.0 20083.0 25 0 2546.4 -1 0 39 610.7762764350289 2439.075999873716 4 610.7769042849541 MULTI CID FTMS 0 0 0 3594 67987.3515625 0.1632586278651178 31 -0.2445554733276367 1 3 {[DA]|[EG]}S 3 -1 5.0482 0.0 0.0 0.20697 0.0 0.0 0.0 2162.9572003954527 2162.9572003954527 4.563631030611579 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {[DA]|[EG]}S 0.20697 - 6 1 2.123 22894.9 0.4799999892711639 197 3396 3594 HBL1_DMSO_200M_050219_1,3595 HBL1_DMSO_200M_050219_1,3595, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3606 15.564 800.0 39185.0 25 0 2217.7 -1 NEKHNVFWWYM 11 55 785.3530681211298 1568.6915833090595 2 785.3536254763603 MULTI CID FTMS 0 0 0 3605 75652.578125 0.9225684202383074 1 -0.0162620544433593 1 Oxidation (M) _NEKHNVFWWYM(Oxidation (M))_ ENST00000281523.7_1_3:21706444-21792415:-|nuORF 1.1933415558491238 0.8695176722560516 3 [PG]S 3 -1 17.447 0.0 0.0 1.1122 0.0 0.0 0.0 1324.5625451833362 1324.5625451833362 9.286662482156348 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [PG]S 1.1122 - 19 1 2.123 26584.2 0.4600000083446502 198 3406 3605 HBL1_DMSO_200M_050219_1,3606 HBL1_DMSO_200M_050219_1,3606,NEKHNVFWWYM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 3608 15.58 800.0 126420.0 25 0 14645.0 -1 0 40 992.831036728452 0 992.833544909954 PEAK CID FTMS 0 0 0 3607 24755.798828125 0.2831383728200079 1 -0.0301361083984375 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.123 75316.8 0.3300000131130218 199 3407 3607 HBL1_DMSO_200M_050219_1,3608 HBL1_DMSO_200M_050219_1,3608, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3609 15.594 800.0 34057.0 25 0 2105.7 -1 0 68 617.6049866525273 1849.7931305577813 3 617.6052123904228 MULTI CID FTMS 0 0 0 3607 81643.84375 1.0 0 0.0 2 3 SGE 3 -1 34.609 0.0 0.0 1.871 0.0 0.0 1558.6869426689127 0.0 1558.6869426689127 0.0 26.650378042405904 0.0 0.0 0 0.0 0.0 1.1421590589602533 0.0 SGE 1.871 - 21 + 1 2.123 28366.2 0.3899999856948852 200 3407 3607 HBL1_DMSO_200M_050219_1,3609 HBL1_DMSO_200M_050219_1,3609, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3611 15.612 800.0 81229.0 25 0 4824.1 -1 0 39 803.7612634769081 4013.769935051541 5 803.9615966677666 MULTI CID FTMS 0 0 0 3610 26543.5546875 0.2718400778721621 -18 0.1262073516845703 1 3 MS 2 -1 7.4743 0.0 0.0 0.18622 0.0 0.0 3079.357961029859 713.2942598932249 3792.652220923084 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MS 0.18622 - 3 + 1 2.13 53576.4 0.3799999952316284 201 3408 3610 HBL1_DMSO_200M_050219_1,3611 HBL1_DMSO_200M_050219_1,3611, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3614 15.632 800.0 50838.0 25 0 2254.1 -1 PGTWLMHCHVT 11 82 677.8076478539168 1353.6007427746335 2 677.8074218630791 MULTI CID FTMS 0 0 0 3613 66123.96875 0.5961484294688146 5 -0.0320510864257812 1 Carbamidomethyl (C),Oxidation (M) _PGTWLM(Oxidation (M))HC(Carbamidomethyl (C))HVT_ ENSG00000089472|ENST00000343002|HEPH;nc|ENSG00000089472|Q9BQS7-2|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH;nc|ENSG00000089472|Q9BQS7-4|HEPH 9.38312468134398 0.8308777417566128 3 [PG]S[NG]SGQ[{I|L}T]YHH 13 -1 + 44.047 0.0 0.0 3.254 3.254 73.391 0.0 0.0 0.0 10.850718816155364 21.51087898710241 10.850718816155364 3.6317790241282566 0 0.0 1.6989700043360187 0.5866968715561641 0.4247425010840047 [PG]S[NG]SGQ[{I|L}T]YHH;[PG]SEEGQ[{I|L}T]YHH;[PG]S[WE]Q[{I|L}T]YHH;[PG]S[NG]SG[WR]YHH;[PG]S[WE][WR]YHH;[HS]{[MG]|[TS]}SGQ[{I|L}T]YHH;[HS]{[MG]|[TS]}SG[WR]YHH 3.254;2.9857;2.7197;2.2093;1.6798;1.3151;0.27252 -;-;-;-;-;-;- 533 1 2.13 37359.0 0.4900000095367431 202 3410 3613 HBL1_DMSO_200M_050219_1,3614 HBL1_DMSO_200M_050219_1,3614,PGTWLMHCHVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3625 15.679 498.0 222240.0 25 0 27889.0 11411 GGQPTGAP 8 131 342.66945891619457 683.3243648991892 2 342.6693603396416 MULTI CID FTMS 0 0 0 3624 103482.59375 0.4038149862631642 -244 1.6758546829223633 1 Unmodified _GGQPTGAP_ ENSG00000173065|ENST00000581407|FAM222B 14.581692164780916 0.6954967302934248 3 [VS]QHVD 6 7 + 32.099 0.0 0.0 4.6975 4.6975 75.874 0.0 0.0 0.0 16.949071216573273 1.8089275985720548 1.8089275985720548 2.894481231141661 0 0.4247425010840047 2.0 0.5 0.4247425010840047 [VS]QHVD;[VS]QHDV;[HQ]VDSV;[VS][AG]HVD;[HV]QDSV;[VS][AG]HDV;[HV][AG]DSV 4.6975;4.2739;3.1673;2.6974;2.3598;2.2738;0.46979 -;-;-;-;-;-;- 45 + 1 2.13 91555.1 1.0 203 3420 3624 HBL1_DMSO_200M_050219_1,3625 HBL1_DMSO_200M_050219_1,3625,GGQPTGAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3632 15.715 800.0 15150.0 25 0 812.88 -1 0 32 679.4975078416384 3392.4511568751914 5 679.8986694216728 MULTI CID FTMS 0 0 0 3631 34392.42578125 0.4730104301827173 1 -0.0426254272460937 1 3 K 1 -1 4.6041 0.0 0.0 0.13572 0.0 0.0 2637.875303458979 623.4535616510374 3261.3288651100165 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.13572 - 1 + 1 2.13 24810.6 0.4600000083446502 204 3426 3631 HBL1_DMSO_200M_050219_1,3632 HBL1_DMSO_200M_050219_1,3632, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3633 15.727 717.0 226370.0 25 0 16119.0 + 27752 PLPEAPRAG 9 248 303.1701913139224 0 303.1701843142509 PEAK CID FTMS 0 0 0 3631 117021.53125 0.9145287831849492 15 -0.1224775314331054 2 Unmodified _PLPEAPRAG_ REV__ENST00000177694.1_1_17:45810693-45811185:+|nuORF 8.745405648335112 0.3266626568796316 3 P{I|L} 2 -1 7.0783 0.0 0.0 1.1713 0.0 0.0 63.99848832117943 327.1671503732535 391.1656386944329 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L} 1.1713 + + 30 + 1 2.13 133465.0 1.0 205 3426 3631 HBL1_DMSO_200M_050219_1,3633 HBL1_DMSO_200M_050219_1,3633,PLPEAPRAG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3634 15.741 800.0 81200.0 25 0 8868.4 + 11972 GPEAGRKPA 9 91 441.7432785561999 881.4720041791998 2 441.7434875369072 MULTI CID FTMS 0 0 0 3631 98438.9375 0.0276765212621462 108 -0.6389541625976562 3 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 45.69961567697781 0.0497987121815769 3 GPEAS 5 5 76.663 0.0 0.0 8.6971 0.0 0.0 0.0 437.2677599765091 437.2677599765091 57.19856517198538 0.0 0.0 0.0 0 1.4896518287104437 2.0 0.3807196863200844 0.0 GPEAS 8.6971 - 294 + 1 2.13 56395.3 0.5299999713897705 206 3426 3631 HBL1_DMSO_200M_050219_1,3634 HBL1_DMSO_200M_050219_1,3634,GPEAGRKPA True True GPEAGRKPA 15.740841 441.743487536907 232482504.0 3631.0 nc|ENSG00000204469|P48634-3|PRRC2A;;ENSG00000204469|ENST00000376033|PRRC2A;;nc|ENSG00000204469|P48634-2|PRRC2A 5.435451030731201 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3636 15.757 800.0 86522.0 25 0 37647.0 -1 ACGFDEYE 8 33 990.3506729768671 989.3433965102672 1 990.3513671755792 MULTI CID FTMS 0 0 0 3635 96284.03125 0.2593896815391188 37 -0.2079973220825195 1 Carbamidomethyl (C) _AC(Carbamidomethyl (C))GFDEYE_ ENSG00000078549|ENST00000304166|ADCYAP1R1;nc|ENSG00000078549|P41586-2|ADCYAP1R1;nc|ENSG00000078549|P41586-3|ADCYAP1R1;nc|ENSG00000078549|P41586-4|ADCYAP1R1;nc|ENSG00000078549|P41586-5|ADCYAP1R1 0.7936320650641473 0.8195151834710337 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 2.13 57279.8 0.949999988079071 207 3427 3635 HBL1_DMSO_200M_050219_1,3636 HBL1_DMSO_200M_050219_1,3636,ACGFDEYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3641 15.785 800.0 27465.0 25 0 1614.6 -1 0 47 515.6432168402973 2573.1797018684865 5 515.8439208865166 MULTI CID FTMS 0 0 0 3640 65662.2421875 0.800696038974067 -3 0.0117425918579101 1 3 [QA]Q 3 -1 10.458 0.0 0.0 0.40641 0.0 0.0 0.0 2243.046637306123 2243.046637306123 3.4678748622465623 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [QA]Q 0.40641 - 11 + 1 2.138 26053.7 0.4300000071525574 208 3431 3640 HBL1_DMSO_200M_050219_1,3641 HBL1_DMSO_200M_050219_1,3641, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3652 15.837 800.0 79967.0 25 0 3563.3 + 29663 QNSHDQLEK 9 116 366.8445906411493 1097.5119425236478 3 366.8443786501884 MULTI CID FTMS 0 0 0 3651 48038.69140625 0.3942968233499394 1 -0.016366958618164 1 Unmodified _QNSHDQLEK_ REV__ENSG00000198265|ENST00000358691|HELZ 12.174745833636583 0.5071271664557081 3 HVDAAEK 7 -1 30.137 0.0 0.0 2.746 0.0 0.0 329.1365285605603 0.0 329.1365285605603 0.0 17.372935763272004 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3054621874040891 HVDAAEK 2.746 - 142 + 1 2.138 56347.6 0.5699999928474426 209 3441 3651 HBL1_DMSO_200M_050219_1,3652 HBL1_DMSO_200M_050219_1,3652,QNSHDQLEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3658 15.869 800.0 49529.0 25 0 3081.8 + 13978 HYWWFHRPSYE 11 34 804.363072719299 0 804.3641235232353 PEAK CID FTMS 0 0 0 3657 13998.072265625 0.2487903817611536 1 -0.01629638671875 1 Unmodified _HYWWFHRPSYE_ REV__ENSG00000164023|ENST00000690982|SGMS2 0.2690200627634905 0.4761840153648598 3 M 1 -1 6.9897 0.0 0.0 0.43503 0.0 0.0 672.2958343040292 800.3333437303824 1472.6291780344116 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.43503 - 1 + 1 2.138 40203.4 0.3899999856948852 210 3446 3657 HBL1_DMSO_200M_050219_1,3658 HBL1_DMSO_200M_050219_1,3658,HYWWFHRPSYE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3673 15.937 800.0 225120.0 25 0 28249.0 11412 GGQPTGAP 8 186 342.66945891619457 683.3243648991892 2 342.6692993044853 MULTI CID FTMS 0 0 0 3672 124031.5078125 0.4840019930743592 -204 1.424448013305664 1 Unmodified _GGQPTGAP_ ENSG00000173065|ENST00000581407|FAM222B 14.581692164780916 0.6954967302934248 3 [VS]QHVD 6 7 + 37.894 0.0 0.0 5.5456 5.5456 83.863 0.0 0.0 0.0 13.12615023948073 6.951687839877891 6.951687839877891 6.951687839877891 0 0.7134679910804405 2.0 0.5242275032520141 0.4247425010840047 [VS]QHVD;[VS]QHDV;[VS]Q[DV]H;[VS][AG]HVD;[HQ]VDSV;[HV]QDSV;[VS][AG]HDV;[HQ]VSVD;[HV]QSVD;[VS][AG][DV]H 5.5456;4.5282;3.6651;3.5454;3.531;3.124;2.5281;2.4007;1.9936;1.665 -;-;-;-;-;-;-;-;-;- 129 + 1 2.138 144681.7 0.6399999856948853 211 3460 3672 HBL1_DMSO_200M_050219_1,3673 HBL1_DMSO_200M_050219_1,3673,GGQPTGAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3690 16.013 800.0 220740.0 25 0 16553.0 + 1716 ALPPEARGP 9 248 303.1701913139224 0 303.1706115603447 PEAK CID FTMS 0 0 0 3689 92751.125 0.7248544142194783 65 -0.3927469253540039 1 Unmodified _ALPPEARGP_ REV__ENST00000350199.8_1_9:36376122-36400677:-|nuORF 13.042465956692816 0.2773713495150148 3 {I|L} 1 -1 7.8771 0.0 0.0 1.3035 0.0 0.0 97.05262191480683 391.1655758590118 488.2181977738186 0.0 0.0 0.0 0.0 0 0.3897727294836955 0.0 0.0 0.0 {I|L} 1.3035 + + 33 + 1 2.138 140303.5 0.4900000095367431 212 3476 3689 HBL1_DMSO_200M_050219_1,3690 HBL1_DMSO_200M_050219_1,3690,ALPPEARGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3694 16.037 800.0 54272.0 25 0 2627.4 -1 0 41 803.7584791154856 4013.756013244428 5 804.5615112185478 MULTI CID FTMS 0 0 0 3693 61790.25 0.5740660537074236 1 -0.016305923461914 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.147 39681.5 0.4900000095367431 213 3479 3693 HBL1_DMSO_200M_050219_1,3694 HBL1_DMSO_200M_050219_1,3694, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3704 16.084 800.0 80040.0 25 0 5077.0 -1 0 83 450.9528416350454 1799.7822606737816 4 450.9525024294853 MULTI CID FTMS 0 0 0 3703 98548.6953125 0.1456591937128491 -28 0.1479930877685547 1 3 QGYHHEH 7 -1 43.136 0.0 0.0 2.3967 0.0 0.0 893.4111743234193 0.0 893.4111743234193 0.0 36.14593550382132 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.4247425010840047 QGYHHEH 2.3967 - 221 + 1 2.147 59616.2 0.4799999892711639 214 3488 3703 HBL1_DMSO_200M_050219_1,3704 HBL1_DMSO_200M_050219_1,3704, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3707 16.105 800.0 52997.0 25 0 6819.2 -1 0 58 631.5722845721177 2522.2600324220707 4 631.8232910037041 MULTI CID FTMS 0 0 0 3706 72855.1875 0.4686783165168696 -9 0.0478401184082031 1 3 G{I|L} 2 -1 10.969 0.0 0.0 0.43489 0.0 0.0 150.0655282172223 2199.066344950216 2349.1318731674382 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L} 0.43489 - 32 + 1 2.154 40572.1 0.4300000071525574 215 3490 3706 HBL1_DMSO_200M_050219_1,3707 HBL1_DMSO_200M_050219_1,3707, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3708 16.118 800.0 42700.0 25 0 3855.0 -1 0 67 600.9349013959913 1799.782874788174 3 600.9353515505791 MULTI CID FTMS 0 0 0 3706 72525.0234375 0.1995025804319735 -16 0.0998382568359375 2 3 Q[YG]HHEH 7 -1 29.926 0.0 0.0 1.6628 0.0 0.0 893.4139915868053 0.0 893.4139915868053 0.0 25.32206343782676 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.5 Q[YG]HHEH 1.6628 - 140 + 1 2.154 34824.2 0.449999988079071 216 3490 3706 HBL1_DMSO_200M_050219_1,3708 HBL1_DMSO_200M_050219_1,3708, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3711 16.139 800.0 31837.0 25 0 2200.2 -1 0 45 617.3162317823102 2465.2358212628405 4 617.5672485232353 MULTI CID FTMS 0 0 0 3710 43291.09765625 0.4328620766747756 1 -0.0162811279296875 1 3 {I|L}[DG] 3 -1 14.265 0.0 0.0 0.57864 0.0 0.0 2162.0931343505345 0.0 2162.0931343505345 0.0 6.817496819840656 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}[DG] 0.57864 - 15 + 1 2.154 28584.1 0.5 217 3492 3710 HBL1_DMSO_200M_050219_1,3711 HBL1_DMSO_200M_050219_1,3711, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3714 16.159 800.0 35931.0 25 0 3171.6 -1 0 70 614.0338924590692 2452.1064639698766 4 614.2841674685478 MULTI CID FTMS 0 0 0 3713 98731.625 0.6605962049421165 -3 0.0238914489746093 1 3 {[DA]|[EG]}S 3 -1 6.8397 0.0 0.0 0.27893 0.0 0.0 0.0 2175.9870236224733 2175.9870236224733 0.1180047080106856 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 {[DA]|[EG]}S 0.27893 - 94 1 2.154 29904.3 0.5 218 3494 3713 HBL1_DMSO_200M_050219_1,3714 HBL1_DMSO_200M_050219_1,3714, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3720 16.191 800.0 221480.0 25 0 29592.0 11413 GGQPTGAP 8 175 342.66945891619457 683.3243648991892 2 342.6689941287041 MULTI CID FTMS 0 0 0 3719 107827.359375 0.4207693493845084 -165 1.2120046615600586 1 Unmodified _GGQPTGAP_ ENSG00000173065|ENST00000581407|FAM222B 14.581692164780916 0.6954967302934248 3 [VS]QHVD 6 7 + 36.982 0.0 0.0 5.4121 5.4121 86.476 0.0 0.0 0.0 12.500335909551332 9.2748208736081 9.2748208736081 9.2748208736081 0 0.7134679910804405 2.0 0.5 0.4247425010840047 [VS]QHVD;[VS]Q[DV]H;[HQ]VD[VS];[VS][AG]HVD;[HV]QD[VS];[HQ]VSVD;[VS][AG][DV]H;[HV]QSVD;{[QV]|[N{I|L}]|[RA]|[KV]}HD[VS];[HV][AG]D[VS] 5.4121;4.0548;3.6412;3.412;3.2341;2.3762;2.0547;1.9691;1.6;0.86812 -;-;-;-;-;-;-;-;-;- 118 + 1 2.154 141267.5 0.75 219 3499 3719 HBL1_DMSO_200M_050219_1,3720 HBL1_DMSO_200M_050219_1,3720,GGQPTGAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3743 16.289 800.0 79300.0 25 0 3307.1 -1 0 45 803.9582042000945 4014.7546386674726 5 804.1597167849541 MULTI CID FTMS 0 0 0 3742 67753.515625 0.2530448717013525 -90 0.5039205551147461 1 3 M 1 -1 5.4846 0.0 0.0 0.13661 0.0 0.0 2075.906657124119 1804.7846718374728 3880.691328961592 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.13661 - 5 + 1 2.157 54731.1 0.5600000023841858 220 3521 3742 HBL1_DMSO_200M_050219_1,3743 HBL1_DMSO_200M_050219_1,3743, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3753 16.326 114.0 185510.0 25 0 14640.0 -1 0 49 450.9528416350454 1799.7822606737816 4 450.9528381228447 MULTI CID FTMS 0 0 0 3752 198626.59375 0.2935786151588443 14 -0.0801067352294921 1 3 THEH 4 -1 20.438 0.0 0.0 1.1356 0.0 0.0 1277.5561387028815 0.0 1277.5561387028815 0.0 13.448434684565813 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 THEH 1.1356 - 70 + 1 2.157 26734.1 1.0 221 3530 3752 HBL1_DMSO_200M_050219_1,3753 HBL1_DMSO_200M_050219_1,3753, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3759 16.358 800.0 208910.0 25 0 15788.0 + 1717 ALPPEARGP 9 265 303.1701913139224 0 303.1702148318291 PEAK CID FTMS 0 0 0 3758 81385.2734375 0.6360297484653812 124 -0.8887748718261719 1 Unmodified _ALPPEARGP_ REV__ENST00000350199.8_1_9:36376122-36400677:-|nuORF 13.042465956692816 0.2773713495150148 3 {I|L} 1 -1 8.5392 0.0 0.0 1.413 0.0 0.0 97.05271065343229 391.1664399739312 488.2191506273635 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {I|L} 1.413 + + 38 + 1 2.157 136643.7 0.5299999713897705 222 3535 3758 HBL1_DMSO_200M_050219_1,3759 HBL1_DMSO_200M_050219_1,3759,ALPPEARGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3761 16.373 766.0 58505.0 25 0 4803.0 -1 0 86 600.9349013959913 1799.782874788174 3 601.2696411013603 MULTI CID FTMS 0 0 0 3760 75487.203125 0.2332222636416396 18 -0.1316909790039062 1 3 QGYHHEH 7 -1 36.124 0.0 0.0 2.0071 0.0 0.0 893.4105125828991 0.0 893.4105125828991 0.0 24.886919736272333 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.5 QGYHHEH 2.0071 - 158 + 1 2.157 42495.0 1.0 223 3536 3760 HBL1_DMSO_200M_050219_1,3761 HBL1_DMSO_200M_050219_1,3761, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3771 16.421 800.0 56626.0 25 0 3134.8 -1 0 78 472.7110153472769 1886.814955522708 4 472.7105285525322 MULTI CID FTMS 0 0 0 3770 79725.9765625 0.1706468789969789 -18 0.0958633422851562 1 3 E[YG]HHESH 8 -1 22.925 0.0 0.0 1.215 0.0 0.0 892.4049956611826 0.0 892.4049956611826 0.0 16.95554701812867 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 E[YG]HHESH 1.215 - 180 + 1 2.157 47491.3 0.4699999988079071 224 3545 3770 HBL1_DMSO_200M_050219_1,3771 HBL1_DMSO_200M_050219_1,3771, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3774 16.441 800.0 17290.0 25 0 2051.7 -1 0 35 691.3074650940565 2761.200754509826 4 691.5598632693291 MULTI CID FTMS 0 0 0 3773 65255.2734375 0.5491240594660134 -14 0.091714859008789 1 3 H 1 -1 3.0989 0.0 0.0 0.11223 0.0 0.0 2097.8982775584573 523.2340792291624 2621.13235678762 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.11223 - 6 + 1 2.157 20480.5 0.4199999868869781 225 3547 3773 HBL1_DMSO_200M_050219_1,3774 HBL1_DMSO_200M_050219_1,3774, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3776 16.456 705.0 221690.0 25 0 31303.0 11414 GGQPTGAP 8 159 342.66945891619457 683.3243648991892 2 342.6690551638603 MULTI CID FTMS 0 0 0 3775 166500.53125 0.6497267540660991 -116 0.6560068130493164 1 Unmodified _GGQPTGAP_ ENSG00000173065|ENST00000581407|FAM222B 14.581692164780916 0.6954967302934248 3 [VS]QHVD 6 7 + 37.617 0.0 0.0 5.505 5.505 83.977 0.0 0.0 0.0 21.89851049298128 7.198595022619266 7.198595022619266 7.231036840527381 0 0.4247425010840047 2.0 0.4247425010840047 0.5 [VS]QHVD;[VS]QHDV;[VS]Q[DV]H;[VS][AG]HVD;[HQ]VDSV;[VS][AG]HDV;[HV]QDSV;[VS][AG][DV]H;{[QV]|[N{I|L}]|[RA]|[KV]}HDSV;[HV][AG]DSV 5.505;4.4468;4.2358;3.3947;2.9201;2.3365;2.2553;2.1256;0.74645;0.31958 -;-;-;-;-;-;-;-;-;- 74 + 1 2.157 125202.4 1.0 226 3548 3775 HBL1_DMSO_200M_050219_1,3776 HBL1_DMSO_200M_050219_1,3776,GGQPTGAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3777 16.47 800.0 63564.0 25 0 4938.3 -1 0 87 629.9455509953466 1886.8148235862395 3 629.9454833865166 MULTI CID FTMS 0 0 0 3775 74956.859375 0.3465328540048266 -16 0.111886978149414 2 3 Q[YG]HHE[HS] 8 -1 29.162 0.0 0.0 1.5456 0.0 0.0 893.4104789590896 0.0 893.4104789590896 0.0 22.17207215904928 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.5 Q[YG]HHE[HS] 1.5456 - 551 + 1 2.157 45195.4 0.3600000143051147 227 3548 3775 HBL1_DMSO_200M_050219_1,3777 HBL1_DMSO_200M_050219_1,3777, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3793 16.534 349.0 207580.0 25 0 7168.2 -1 0 50 803.9582042000945 4014.7546386674726 5 804.1590453982353 MULTI CID FTMS 0 0 0 3792 214235.6875 0.8001244150537546 -48 0.2755050659179687 1 3 S 1 -1 6.9897 0.0 0.0 0.1741 0.0 0.0 2153.969885989305 1770.7300622214414 3924.699948210746 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.1741 - 6 + 1 2.162 60454.9 1.0 228 3563 3792 HBL1_DMSO_200M_050219_1,3793 HBL1_DMSO_200M_050219_1,3793, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3803 16.581 800.0 14645.0 25 0 1637.7 -1 0 32 707.9959889905234 2120.96613757177 3 708.3310424685478 MULTI CID FTMS 0 0 0 3802 19154.990234375 0.2322489992365211 -1 0.0039844512939453 1 3 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.18762 0.0 0.0 1828.847864721964 142.06321130924064 1970.9110760312044 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.18762 - 2 + 1 2.162 18302.4 0.4799999892711639 229 3572 3802 HBL1_DMSO_200M_050219_1,3803 HBL1_DMSO_200M_050219_1,3803, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3806 16.601 800.0 102190.0 25 0 13691.0 + 16578 KDKRKGFG 8 94 468.2746732626047 0 468.2749816775322 PEAK CID FTMS 0 0 0 3805 55376.359375 0.5755053308851141 1 -0.0301418304443359 1 Unmodified _KDKRKGFG_ REV__ENST00000449228.5_1_19:47735894-47735990:-|nuORF 7.910154910731844 0.5650536163073903 3 PK 2 -1 14.776 0.0 0.0 1.5811 0.0 0.0 182.0695349189992 524.2951774242545 706.3647123432536 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 PK 1.5811 - 15 + 1 2.162 66903.6 0.5 230 3574 3805 HBL1_DMSO_200M_050219_1,3806 HBL1_DMSO_200M_050219_1,3806,KDKRKGFG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3807 16.615 800.0 37403.0 25 0 2905.4 -1 0 38 659.0408059521919 2632.1341179423675 4 659.2917968630791 MULTI CID FTMS 0 0 0 3805 65095.01953125 1.0 0 0.0 2 3 H 1 -1 3.0989 0.0 0.0 0.11774 0.0 0.0 1972.84220007303 519.2036837213499 2492.04588379438 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.11774 - 4 + 1 2.162 32120.1 0.4300000071525574 231 3574 3805 HBL1_DMSO_200M_050219_1,3807 HBL1_DMSO_200M_050219_1,3807, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3820 16.674 800.0 125570.0 25 0 5132.5 -1 0 108 472.7110153472769 1886.814955522708 4 472.7109557986259 MULTI CID FTMS 0 0 0 3819 171543.734375 0.3671752187272622 23 -0.1769866943359375 1 3 GGQ[MN]DHHESH 11 -1 35.256 0.0 0.0 1.8685 0.0 0.0 639.3078816542308 0.0 639.3078816542308 0.0 12.178451130928046 0.0 0.0 0 0.0 0.0 0.9386218330464624 0.3252574989159953 GGQ[MN]DHHESH 1.8685 - 1411 + 1 2.162 91089.8 0.800000011920929 232 3586 3819 HBL1_DMSO_200M_050219_1,3820 HBL1_DMSO_200M_050219_1,3820, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3827 16.708 649.0 235000.0 25 0 32578.0 + 26840 PASGGQAP 8 157 342.66945891619457 683.3243648991892 2 342.6692382693291 MULTI CID FTMS 0 0 0 3826 156286.84375 0.6098703885842593 -72 0.4251213073730469 1 Unmodified _PASGGQAP_ REV__ENSG00000160460|ENST00000598249|SPTBN4;REV__nc|ENSG00000160460|Q9H254-3|SPTBN4 19.438996006549623 0.6237395211498085 3 [VS]QHVD 6 -1 + 35.207 0.0 0.0 5.1524 5.1524 78.28 0.0 0.0 0.0 10.390630067274202 3.1527043477859067 3.1527043477859067 3.1527043477859067 0 0.75 2.0 0.4247425010840047 0.5 [VS]QHVD;[VS]QHDV;[VS][AG]HVD;[HQ]VDSV;[HQ]VSVD;[HV]QDSV;[VS][AG]HDV;[HV]QSVD;[HV][AG]DSV;[HV][AG]SVD 5.1524;4.691;3.0421;3.0126;2.8013;2.6725;2.5807;2.4612;0.78248;0.57119 -;-;-;-;-;-;-;-;-;- 74 + 1 2.169 123327.9 1.0 233 3592 3826 HBL1_DMSO_200M_050219_1,3827 HBL1_DMSO_200M_050219_1,3827,PASGGQAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3828 16.722 800.0 45906.0 25 0 3141.9 -1 0 74 450.95290693589953 1799.7825218771982 4 450.9530822634697 MULTI CID FTMS 0 0 0 3826 67900.8046875 0.9202131736983424 -4 0.015655517578125 2 3 THEH 4 -1 20.719 0.0 0.0 1.1512 0.0 0.0 1277.552981937548 0.0 1277.552981937548 0.0 17.620251144456915 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 THEH 1.1512 - 68 + 1 2.169 38354.0 0.4399999976158142 234 3592 3826 HBL1_DMSO_200M_050219_1,3828 HBL1_DMSO_200M_050219_1,3828, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3830 16.738 800.0 59029.0 25 0 3952.0 -1 0 90 629.9455509953466 1886.8148235862395 3 629.9463989138603 MULTI CID FTMS 0 0 0 3829 82693.6640625 0.3823008548468082 29 -0.2324943542480468 1 3 SH 2 -1 16.81 0.0 0.0 0.89094 0.0 0.0 1644.713610062605 0.0 1644.713610062605 0.0 5.528871982441359 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SH 0.89094 - 167 + 1 2.169 40771.5 0.3799999952316284 235 3593 3829 HBL1_DMSO_200M_050219_1,3830 HBL1_DMSO_200M_050219_1,3830, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3842 16.793 800.0 194110.0 25 0 6546.9 -1 0 61 803.9582042000945 4014.7546386674726 5 804.3596069216728 MULTI CID FTMS 0 0 0 3841 238313.703125 0.7662470482154452 23 -0.208963394165039 1 3 HP 2 -1 19.464 0.0 0.0 0.48481 0.0 0.0 0.0 3777.61441576756 3777.61441576756 12.474250108400469 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HP 0.48481 - 7 + 1 2.169 113485.9 0.800000011920929 236 3604 3841 HBL1_DMSO_200M_050219_1,3842 HBL1_DMSO_200M_050219_1,3842, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3843 16.807 800.0 23620.0 25 0 1696.7 -1 0 26 1004.694517750893 4014.748965137172 4 1005.446459949017 MULTI CID FTMS 0 0 0 3841 77355.9140625 1.0 0 0.0 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.169 21554.1 0.4099999964237213 237 3604 3841 HBL1_DMSO_200M_050219_1,3843 HBL1_DMSO_200M_050219_1,3843, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3848 16.835 800.0 39522.0 25 0 3667.2 -1 0 65 575.9312110658087 1724.771803797626 3 575.9299804568291 MULTI CID FTMS 0 0 0 3847 62542.46484375 0.2232670704536205 -15 0.0971298217773437 1 3 Q 1 -1 16.376 0.0 0.0 0.94945 0.0 0.0 1578.7026032134447 0.0 1578.7026032134447 0.0 11.771824604062935 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 Q 0.94945 - 57 + 1 2.169 33671.5 0.4699999988079071 238 3608 3847 HBL1_DMSO_200M_050219_1,3848 HBL1_DMSO_200M_050219_1,3848, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3853 16.863 800.0 42873.0 25 0 3041.9 -1 0 43 815.362267134593 4071.7749533399647 5 815.5620605349541 MULTI CID FTMS 0 0 0 3852 49100.625 0.7073495528249953 1 -0.0301685333251953 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.169 35178.1 0.449999988079071 239 3612 3852 HBL1_DMSO_200M_050219_1,3853 HBL1_DMSO_200M_050219_1,3853, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3854 16.877 800.0 22824.0 25 0 1276.4 + 1772 ALRWRKRRWEW 11 32 821.96242627321 0 822.1678344607353 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _ALRWRKRRWEW_ ENST00000456291.1_3_9:123638279-123638699:-|nuORF 0.0 0.4761840153648598 3 E 1 10 5.4846 0.0 0.0 0.33403 0.0 0.0 691.4928934626324 818.3433931940061 1509.8362866566383 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.33403 + + 1 + 1 2.169 25899.7 0.4300000071525574 240 3612 3852 HBL1_DMSO_200M_050219_1,3854 HBL1_DMSO_200M_050219_1,3854,ALRWRKRRWEW False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 3857 16.897 800.0 79074.0 25 0 3332.6 -1 0 40 831.5665986450806 4152.796610892403 5 831.9659301638603 MULTI CID FTMS 0 0 0 3856 92258.9296875 0.4697925721239626 -5 0.0458412170410156 1 3 R 1 -1 3.9794 0.0 0.0 0.095825 0.0 0.0 3330.435967437128 663.2529390924436 3993.688906529572 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.095825 - 1 + 1 2.169 52336.8 0.5 241 3614 3856 HBL1_DMSO_200M_050219_1,3857 HBL1_DMSO_200M_050219_1,3857, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3861 16.921 800.0 17505.0 25 0 2795.3 -1 0 25 781.1492177211359 3900.709706272679 5 781.7518798708916 MULTI CID FTMS 0 0 0 3860 40054.328125 0.4170335366461239 -8 0.0699329376220703 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.169 21912.7 0.4000000059604645 242 3617 3860 HBL1_DMSO_200M_050219_1,3861 HBL1_DMSO_200M_050219_1,3861, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3864 16.942 800.0 35659.0 25 0 1792.8 -1 0 61 472.7110153472769 1886.814955522708 4 472.9609557986259 MULTI CID FTMS 0 0 0 3863 84579.03125 0.1749978953924029 61 -0.4381217956542969 1 3 MH[TA]H 5 -1 20.445 0.0 0.0 1.0836 0.0 0.0 1291.57235405962 0.0 1291.57235405962 0.0 13.455612550363796 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 MH[TA]H 1.0836 - 90 + 1 2.174 34244.6 0.4799999892711639 243 3619 3863 HBL1_DMSO_200M_050219_1,3864 HBL1_DMSO_200M_050219_1,3864, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3867 16.954 349.0 265480.0 25 0 40437.0 11415 GGQPTGAP 8 119 342.66945891619457 683.3243648991892 2 342.6690246462822 MULTI CID FTMS 0 0 0 3866 181424.296875 0.7079630234952664 -43 0.3187084197998047 1 Unmodified _GGQPTGAP_ ENSG00000173065|ENST00000581407|FAM222B 14.581692164780916 0.6954967302934248 3 [VS]QHVD 6 7 + 33.68 0.0 0.0 4.9288 4.9288 79.188 0.0 0.0 0.0 20.4356221803384 3.724071855847434 3.724071855847434 4.533186976871221 0 0.4247425010840047 2.0 0.5731074559755159 0.4247425010840047 [VS]QHVD;[VS]QHDV;[VS][AG]HVD;[HQ]VDSV;[VS][AG]HDV;[HV]QDSV;{[SA]|[TG]}[NP]Q[PA] 4.9288;4.2654;2.9287;2.8927;2.2653;1.4628;0.01528 -;-;-;-;-;-;- 74 + 1 2.174 76996.7 1.0 244 3621 3866 HBL1_DMSO_200M_050219_1,3867 HBL1_DMSO_200M_050219_1,3867,GGQPTGAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3871 16.978 800.0 30723.0 25 0 2410.9 -1 0 67 604.9422187891853 1811.804826967756 3 604.9418212771416 MULTI CID FTMS 0 0 0 3870 74501.859375 0.4908232850719638 -20 0.1848392486572265 1 3 {I|L} 1 -1 1.9897 0.0 0.0 0.10982 0.0 0.0 1062.466165523522 633.2441500299436 1695.7103155534655 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.10982 - 56 + 1 2.174 28259.7 0.5699999928474426 245 3624 3870 HBL1_DMSO_200M_050219_1,3871 HBL1_DMSO_200M_050219_1,3871, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3875 16.994 274.0 410800.0 25 0 56830.0 15032 ILTEEINDK 9 108 358.86228263002045 1073.5650184902613 3 358.8622009158134 MULTI CID FTMS 0 0 0 3874 236960.296875 0.8030665570314094 -7 0.0444889068603515 1 Unmodified _ILTEEINDK_ ENSG00000139865|ENST00000553443|TTC6 11.640296217721598 0.521594087909532 3 KTT{I|L}HWPK 8 7 41.546 0.0 0.0 3.8699 0.0 0.0 64.00000155723065 0.0 64.00000155723065 0.0 31.167424607940543 0.0 0.0 0 0.8539171939081174 0.0 0.8494850021680094 0.2396518287104437 KTT{I|L}HWPK 3.8699 - 150 + 1 2.174 95424.1 1.0 246 3627 3874 HBL1_DMSO_200M_050219_1,3875 HBL1_DMSO_200M_050219_1,3875,ILTEEINDK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3876 17.007 800.0 72342.0 25 0 4215.2 -1 0 81 522.2441237078364 2084.9473889649453 4 522.2441284060478 MULTI CID FTMS 0 0 0 3874 107568.375 1.0 0 0.0 2 3 QS[DV] 4 -1 17.396 0.0 0.0 0.83435 0.0 0.0 1637.7619984304788 0.0 1637.7619984304788 0.0 3.416375079047498 0.0 0.0 0 0.2742275032520141 0.0 0.5 0.4247425010840047 QS[DV] 0.83435 - 12 1 2.174 51576.8 0.5799999833106995 247 3627 3874 HBL1_DMSO_200M_050219_1,3876 HBL1_DMSO_200M_050219_1,3876, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3879 17.027 800.0 23329.0 25 0 1426.5 -1 0 45 757.3321848037359 3781.624541685679 5 757.7317993044853 MULTI CID FTMS 0 0 0 3878 28932.232421875 0.3022221329064675 -5 0.0491619110107421 1 3 R{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 3 -1 10.458 0.0 0.0 0.27654 0.0 0.0 3346.4322709844496 0.0 3346.4322709844496 0.0 3.4678748622465623 0.0 0.0 0 0.0 0.0 0.0 0.0 R{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 0.27654 - 4 1 2.174 25199.6 0.449999988079071 248 3629 3878 HBL1_DMSO_200M_050219_1,3879 HBL1_DMSO_200M_050219_1,3879, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3883 17.051 800.0 48295.0 25 0 4382.7 -1 0 28 803.9582042000945 4014.7546386674726 5 804.3600952029228 MULTI CID FTMS 0 0 0 3882 60563.44140625 0.1947288703871427 51 -0.3661098480224609 1 3 D 1 -1 5.4846 0.0 0.0 0.13661 0.0 0.0 3279.4796885715728 617.2371309869749 3896.716819558548 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.13661 - 2 + 1 2.174 37462.5 0.4699999988079071 249 3632 3882 HBL1_DMSO_200M_050219_1,3883 HBL1_DMSO_200M_050219_1,3883, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3887 17.076 800.0 78906.0 25 0 10445.0 + 17653 KPTGARPSA 9 97 442.7505823990608 883.4866118649215 2 442.7507202029228 MULTI CID FTMS 0 0 0 3886 57792.94921875 0.6153573020663784 -15 0.1177730560302734 1 Unmodified _KPTGARPSA_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 20.41453444215458 0.284085796332423 3 KPTG 4 5 42.735 0.0 0.0 4.8371 0.0 0.0 0.0 497.24814783267817 497.24814783267817 32.554036303449934 0.0 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.0 + KPTG 4.8371 + + 94 + 1 2.174 51587.7 0.5299999713897705 250 3635 3886 HBL1_DMSO_200M_050219_1,3887 HBL1_DMSO_200M_050219_1,3887,KPTGARPSA False True KPTGARPSA 17.07562 442.750720202923 725553.0 3886.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 4.477312723795573 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3889 17.089 620.0 68383.0 25 0 5299.4 -1 0 61 575.9312110658087 1724.771803797626 3 575.9312621951103 MULTI CID FTMS 0 0 0 3888 147372.96875 0.5260990445302794 13 -0.0974845886230468 1 3 Q 1 -1 15.819 0.0 0.0 0.91716 0.0 0.0 1578.702450625554 0.0 1578.702450625554 0.0 5.334281652289512 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 Q 0.91716 - 45 + 1 2.174 40729.3 1.0 251 3636 3888 HBL1_DMSO_200M_050219_1,3889 HBL1_DMSO_200M_050219_1,3889, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3892 17.109 800.0 66864.0 25 0 3256.6 + 15955 ITANLVMIL 9 97 494.3008467445566 986.5871405559132 2 494.3006774783134 MULTI CID FTMS 0 0 0 3891 60677.421875 0.4654895002336824 -22 0.1916522979736328 1 Unmodified _ITANLVMIL_ ENSG00000177151|ENST00000641268|OR2T35;ENSG00000196240|ENST00000641925|OR2T2 34.10243960390752 0.1078313939113124 3 {I|L}TA[KA]S{I|L}RQ 9 6 + 61.552 0.0 0.0 6.2389 6.2389 92.287 0.0 0.0 0.0 43.84928637248976 8.940023627005118 8.940023627005118 36.14361490086914 0 0.8182503180159344 2.0 0.0 1.30691957331927 {I|L}TA[KA]S{I|L}RQ;[{I|L}T][RV][KS]{I|L}[NG];[{I|L}T][RV][{I|L}T]{[RE]|[WV]} 6.2389;2.5754;1.3673 -;-;- 185 + 1 2.18 46383.8 0.5099999904632568 252 3638 3891 HBL1_DMSO_200M_050219_1,3892 HBL1_DMSO_200M_050219_1,3892,ITANLVMIL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3900 17.149 800.0 67084.0 25 0 5924.6 + -1 WRNQICWRCFE 11 94 533.2450261351285 1596.713249005585 3 533.2443115115166 MULTI CID FTMS 0 0 0 3899 64437.49609375 0.4675828922248579 -17 0.1253242492675781 1 Carbamidomethyl (C) _WRNQICWRC(Carbamidomethyl (C))FE_ REV__ENSG00000068784|ENST00000263736|SRBD1;REV__nc|ENSG00000068784|Q8N5C6-2|SRBD1 0.5059551277355931 0.8727608062196215 3 Q[SG]HEH 6 -1 12.585 0.0 0.0 0.78817 0.0 0.0 903.4283501792166 0.0 903.4283501792166 0.0 6.118960344387787 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.5 Q[SG]HEH 0.78817 - 77 + 1 2.18 50221.4 0.5 253 3645 3899 HBL1_DMSO_200M_050219_1,3900 HBL1_DMSO_200M_050219_1,3900,WRNQICWRCFE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3904 17.173 800.0 19120.0 25 0 971.51 -1 0 42 781.1492177211359 3900.709706272679 5 781.7526733279228 MULTI CID FTMS 0 0 0 3903 28511.099609375 0.2968489364410622 20 -0.108774185180664 1 3 K 1 -1 5.4846 0.0 0.0 0.1406 0.0 0.0 250.9896878174044 3518.5228622003324 3769.512550017737 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.1406 - 3 + 1 2.18 21894.1 0.4399999976158142 254 3648 3903 HBL1_DMSO_200M_050219_1,3904 HBL1_DMSO_200M_050219_1,3904, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3912 17.206 400.0 260760.0 25 0 38176.0 11416 GGQPTGAP 8 128 342.66945891619457 683.3243648991892 2 342.6692382693291 MULTI CID FTMS 0 0 0 3911 185516.5625 0.7239320684066923 -9 0.0474739074707031 1 Unmodified _GGQPTGAP_ ENSG00000173065|ENST00000581407|FAM222B 14.581692164780916 0.6954967302934248 3 [VS]QHVD 6 7 + 35.153 0.0 0.0 5.1443 5.1443 77.302 0.0 0.0 0.0 23.50930215488228 2.880650184996128 2.880650184996128 2.880650184996128 0 0.3807196863200844 2.0 0.5 0.4247425010840047 [VS]QHVD;[VS]QHDV;[VS][AG]HVD;[VS][AG]HDV;[HQ]VDSV;[HV]QDSV 5.1443;4.7228;3.1442;2.7226;2.6723;1.1148 -;-;-;-;-;- 67 + 1 2.18 86164.7 1.0 255 3655 3911 HBL1_DMSO_200M_050219_1,3912 HBL1_DMSO_200M_050219_1,3912,GGQPTGAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3916 17.23 800.0 29955.0 25 0 3313.8 -1 0 59 604.9422187891853 1811.804826967756 3 604.9424926638603 MULTI CID FTMS 0 0 0 3915 111691.25 0.7358295041048293 14 -0.1060791015625 1 3 Q 1 -1 11.109 0.0 0.0 0.61316 0.0 0.0 1665.735794230254 0.0 1665.735794230254 0.0 4.119543704721593 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.61316 - 34 + 1 2.18 24917.8 0.5099999904632568 256 3658 3915 HBL1_DMSO_200M_050219_1,3916 HBL1_DMSO_200M_050219_1,3916, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3928 17.286 800.0 37874.0 25 0 7954.1 -1 SRNDLKYTGGC 11 43 628.2905934181455 0 628.2928954958916 PEAK CID FTMS 0 0 0 3927 37272.44140625 0.4006338514336752 -16 0.0808315277099609 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SRNDLKYTGGC_ MER2_dup7702|chr15:44718484-44718821:-|1.4306555919098507|0.3372335082267703|2.08|48.0|4|1|sense 2.498486711656943 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.18 31508.8 0.4000000059604645 257 3669 3927 HBL1_DMSO_200M_050219_1,3928 HBL1_DMSO_200M_050219_1,3928,SRNDLKYTGGC False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 3929 17.3 800.0 41429.0 25 0 1597.0 -1 0 31 831.7667047787415 0 831.7654296755791 PEAK CID FTMS 0 0 0 3927 88756.140625 1.0 0 0.0 2 3 R 1 -1 5.4846 0.0 0.0 0.33009 0.0 0.0 839.1563821143205 663.2502535455686 1502.4066356598892 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.33009 - 3 + 1 2.18 30069.7 0.4199999868869781 258 3669 3927 HBL1_DMSO_200M_050219_1,3929 HBL1_DMSO_200M_050219_1,3929, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3932 17.32 800.0 58050.0 25 0 4231.9 -1 0 28 803.7573531161219 4013.750383247609 5 804.3602172732353 MULTI CID FTMS 0 0 0 3931 59489.34375 0.8391686906678548 -2 0.0339908599853515 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.18 43367.5 0.3799999952316284 259 3671 3931 HBL1_DMSO_200M_050219_1,3932 HBL1_DMSO_200M_050219_1,3932, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3936 17.344 800.0 89588.0 25 0 20571.0 -1 0 81 575.9312538462511 1724.7719321389532 3 576.2665893435478 MULTI CID FTMS 0 0 0 3935 72388.109375 0.7821207367620663 1 -0.0163288116455078 1 3 Q 1 -1 17.104 0.0 0.0 0.99167 0.0 0.0 1578.702456896569 0.0 1578.702456896569 0.0 14.885606273598311 0.0 0.0 0 0.0 0.0 0.0 0.25 Q 0.99167 - 31 + 1 2.18 63520.0 0.5299999713897705 260 3674 3935 HBL1_DMSO_200M_050219_1,3936 HBL1_DMSO_200M_050219_1,3936, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3944 17.384 800.0 29271.0 25 0 3108.3 -1 0 55 606.5343640764494 2422.1083504393973 4 606.7844116091728 MULTI CID FTMS 0 0 0 3943 42869.30859375 0.6037909527607297 1 -0.030059814453125 1 3 Q 1 -1 0.71334 0.0 0.0 0.029451 0.0 0.0 1833.18947944506 457.8278597467407 2291.0173391918006 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.029451 - 1 + 1 2.185 28660.8 0.4699999988079071 261 3681 3943 HBL1_DMSO_200M_050219_1,3944 HBL1_DMSO_200M_050219_1,3944, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3945 17.398 800.0 244850.0 25 0 181660.0 32232 RWHCQCKQDFN 11 74 488.8800086213456 0 488.8801757693291 PEAK CID FTMS 0 0 0 3943 253685.96875 0.7382172119500974 27 -0.1812057495117187 2 Unmodified _RWHCQCKQDFN_ ENSG00000169344|ENST00000396138|UMOD;nc|ENSG00000169344|P07911-2|UMOD;nc|ENSG00000169344|P07911-3|UMOD;nc|ENSG00000169344|P07911-4|UMOD;nc|ENSG00000169344|P07911-5|UMOD 0.3666738066901352 0.4761840153648598 3 A 1 11 3.9794 0.0 0.0 0.40783 0.0 0.0 557.7581057253002 343.9309481256469 901.6890538509472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.40783 - 5 + 1 2.185 154670.3 0.8899999856948853 262 3681 3943 HBL1_DMSO_200M_050219_1,3945 HBL1_DMSO_200M_050219_1,3945,RWHCQCKQDFN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 3952 17.433 800.0 48707.0 25 0 19987.0 -1 0 30 990.350833432761 0 990.3491088747978 PEAK CID FTMS 0 0 0 3951 64600.5390625 0.5644376271864882 -28 0.1870136260986328 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.185 39328.9 0.449999988079071 263 3687 3951 HBL1_DMSO_200M_050219_1,3952 HBL1_DMSO_200M_050219_1,3952, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3958 17.465 800.0 249910.0 25 0 34553.0 + 26841 PASGGQAP 8 176 342.66945891619457 683.3243648991892 2 342.6692687869072 MULTI CID FTMS 0 0 0 3957 191146.578125 0.7459017987727788 28 -0.1837978363037109 1 Unmodified _PASGGQAP_ REV__ENSG00000160460|ENST00000598249|SPTBN4;REV__nc|ENSG00000160460|Q9H254-3|SPTBN4 19.438996006549623 0.6237395211498085 3 SVQHVD 6 -1 + 50.77 0.0 0.0 7.4298 7.4298 85.649 0.0 0.0 0.0 28.26568049169897 3.3775280268872123 3.3775280268872123 3.3775280268872123 0 0.6694451763165201 2.0 0.4247425010840047 0.5 SVQHVD;SVQHDV;SVQ[DV]H;SV[AG]HVD;SV[AG]HDV;SV[AG][DV]H;[VS]QHVD;[HQ]VSVD;[HV]QSVD;[HV][AG]SVD 7.4298;6.9355;6.189;5.3195;4.8253;4.0787;3.2933;2.4767;2.2114;0.21129 -;-;-;-;-;-;-;-;-;- 111 + 1 2.185 159822.8 0.7300000190734863 264 3692 3957 HBL1_DMSO_200M_050219_1,3958 HBL1_DMSO_200M_050219_1,3958,PASGGQAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 3964 17.497 800.0 16701.0 25 0 1039.5 -1 0 36 781.1493467923664 3900.710351628832 5 781.3513671755791 MULTI CID FTMS 0 0 0 3963 15055.32421875 0.1525753785106786 21 -0.1439990997314453 1 3 {I|L} 1 -1 4.6041 0.0 0.0 0.11803 0.0 0.0 3006.06711540012 778.5253389947874 3784.592454394907 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.11803 - 2 + 1 2.185 20002.7 0.4300000071525574 265 3697 3963 HBL1_DMSO_200M_050219_1,3964 HBL1_DMSO_200M_050219_1,3964, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3969 17.525 800.0 14687.0 25 0 925.04 -1 0 29 764.1443719054074 0 764.1443359255791 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.19 19854.4 0.4300000071525574 266 3701 3968 HBL1_DMSO_200M_050219_1,3969 HBL1_DMSO_200M_050219_1,3969, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3979 17.573 800.0 175700.0 25 0 4838.0 -1 0 75 804.1549592916105 4015.738414125052 5 804.3570434451103 MULTI CID FTMS 0 0 0 3978 153053.578125 0.1200355848563807 -15 0.0834903717041015 1 3 D{[YC]|[HE]} 3 -1 10.458 0.0 0.0 0.26041 0.0 0.0 3616.598748452981 0.0 3616.598748452981 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 D{[YC]|[HE]} 0.26041 - 57 + 1 2.19 105525.1 0.6700000166893005 267 3710 3978 HBL1_DMSO_200M_050219_1,3979 HBL1_DMSO_200M_050219_1,3979, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3982 17.593 800.0 67864.0 25 0 2482.3 -1 0 55 1004.9415262354436 4015.736999075375 4 1005.442187488079 MULTI CID FTMS 0 0 0 3981 63405.62890625 0.2252729810113779 -14 0.0794811248779296 1 3 TC 2 -1 13.443 0.0 0.0 0.33477 0.0 0.0 3793.671503481576 0.0 3793.671503481576 0.0 8.839256468719157 0.0 0.0 0 0.0 0.0 0.0 0.0 TC 0.33477 - 4 1 2.19 43571.5 0.3700000047683716 268 3712 3981 HBL1_DMSO_200M_050219_1,3982 HBL1_DMSO_200M_050219_1,3982, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3987 17.621 800.0 29781.0 25 0 4682.8 -1 0 45 622.0676838148394 3105.3020367411964 5 622.2680541872978 MULTI CID FTMS 0 0 0 3986 32175.6171875 0.3958813328479753 1 -0.0162906646728515 1 3 T 1 -1 5.4846 0.0 0.0 0.17662 0.0 0.0 395.1803936152517 2606.076544464549 3001.2569380798013 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.17662 - 5 + 1 2.19 27545.6 0.4699999988079071 269 3716 3986 HBL1_DMSO_200M_050219_1,3987 HBL1_DMSO_200M_050219_1,3987, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3993 17.653 800.0 22523.0 25 0 4185.1 -1 0 46 529.74699209768 2114.95886252432 4 529.9971191287041 MULTI CID FTMS 0 0 0 3992 26663.412109375 0.3577881787802008 1 -0.016326904296875 1 3 EH 2 -1 20.969 0.0 0.0 0.99147 0.0 0.0 1830.845503004592 0.0 1830.845503004592 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 EH 0.99147 - 14 + 1 2.19 24858.2 0.4799999892711639 270 3721 3992 HBL1_DMSO_200M_050219_1,3993 HBL1_DMSO_200M_050219_1,3993, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 3996 17.673 800.0 30742.0 25 0 1066.5 -1 0 46 821.5612547321484 4102.769891327742 5 822.1641113162041 MULTI CID FTMS 0 0 0 3995 36542.0625 0.3261890067219964 -5 0.0319499969482421 1 3 N 1 -1 1.9897 0.0 0.0 0.048497 0.0 0.0 3179.359504220123 806.3282391273877 3985.687743347511 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.048497 - 1 + 1 2.19 28531.6 0.4099999964237213 271 3723 3995 HBL1_DMSO_200M_050219_1,3996 HBL1_DMSO_200M_050219_1,3996, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4000 17.697 800.0 39803.0 25 0 986.48 -1 0 49 821.5612547321484 4102.769891327742 5 821.7629272341728 MULTI CID FTMS 0 0 0 3999 64404.9375 0.3592918407012906 -8 0.0560455322265625 1 3 MV 2 -1 8.5835 0.0 0.0 0.20921 0.0 0.0 3151.3583563964607 718.2893770807249 3869.6477334771857 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MV 0.20921 - 31 + 1 2.19 32119.0 0.5099999904632568 272 3726 3999 HBL1_DMSO_200M_050219_1,4000 HBL1_DMSO_200M_050219_1,4000, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4001 17.711 800.0 19860.0 25 0 1101.7 -1 0 30 829.7678778727679 4143.80300703084 5 830.1697875857353 MULTI CID FTMS 0 0 0 3999 82585.859375 1.0 0 0.0 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.19 19783.7 0.4799999892711639 273 3726 3999 HBL1_DMSO_200M_050219_1,4001 HBL1_DMSO_200M_050219_1,4001, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4002 17.725 800.0 40413.0 25 0 16077.0 -1 0 32 990.350833432761 0 990.3538696169852 PEAK CID FTMS 0 0 0 3999 84689.109375 0.7399585303446858 11 -0.1479358673095703 3 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.19 32857.6 0.4399999976158142 274 3726 3999 HBL1_DMSO_200M_050219_1,4002 HBL1_DMSO_200M_050219_1,4002, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4004 17.74 758.0 245050.0 25 0 31255.0 + 42261 VSPGNGGP 8 178 342.66945891619457 683.3243648991892 2 342.6691161990166 MULTI CID FTMS 0 0 0 4003 143424.0 0.5596763522349194 63 -0.5286445617675781 1 Unmodified _VSPGNGGP_ REV__ENSG00000144283|ENST00000389759|PKP4;REV__ENST00000480171.7_1_2:159519375-159537186:+|nuORF;REV__ENST00000486254.3_1_2:159526197-159533456:+|nuORF;REV__nc|ENSG00000144283|Q99569-2|PKP4 14.581692164780916 0.6954967302934248 3 [HQ]VDSV 6 -1 + 31.947 0.0 0.0 4.6753 4.6753 77.334 0.0 0.0 0.0 3.661766303846022 6.522496736287458 3.661766303846022 3.661766303846022 0 0.0044321917401078 0.494850021680094 0.0 1.2059771852360797 [HQ]VDSV;[VS][HQ]VD;[VS][HQ]DV;[HV]QDSV;[HQ]VSVD;[HV]QSVD;[HV][AG]DSV;[HV][AG]SVD 4.6753;4.1394;3.8264;3.6189;3.4203;2.3639;1.2072;0.42818 -;-;-;-;-;-;-;- 108 1 2.19 147826.4 1.0 275 3727 4003 HBL1_DMSO_200M_050219_1,4004 HBL1_DMSO_200M_050219_1,4004,VSPGNGGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4005 17.754 800.0 59568.0 25 0 1660.2 -1 0 68 815.5590185487196 4072.758710410598 5 815.7584106326103 MULTI CID FTMS 0 0 0 4003 141225.59375 0.9020642077309884 -4 0.0680694580078125 2 3 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.11305 0.0 0.0 3257.396235900635 665.2667330377561 3922.6629689383913 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.11305 - 10 + 1 2.19 42231.4 0.4900000095367431 276 3727 4003 HBL1_DMSO_200M_050219_1,4005 HBL1_DMSO_200M_050219_1,4005, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4008 17.775 800.0 52495.0 25 0 2372.3 -1 0 60 598.7615042731067 2391.0169112260264 4 598.7611572146416 MULTI CID FTMS 0 0 0 4007 109911.9453125 1.0 0 0.0 1 3 Q 1 -1 9.6041 0.0 0.0 0.40167 0.0 0.0 1569.6741510715326 690.2604523069025 2259.934603378435 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 Q 0.40167 - 39 + 1 2.195 40294.6 0.4600000083446502 277 3729 4007 HBL1_DMSO_200M_050219_1,4008 HBL1_DMSO_200M_050219_1,4008, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4012 17.799 800.0 25986.0 25 0 1043.7 -1 0 45 686.7182832852834 3428.555034093417 5 687.1192504763603 MULTI CID FTMS 0 0 0 4011 28077.79296875 0.449446264149471 1 -0.0162467956542968 1 3 SS 2 -1 10.969 0.0 0.0 0.31993 0.0 0.0 823.3783853851268 2428.0858238793594 3251.4642092644863 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SS 0.31993 - 11 + 1 2.195 23403.0 0.4399999976158142 278 3732 4011 HBL1_DMSO_200M_050219_1,4012 HBL1_DMSO_200M_050219_1,4012, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4015 17.819 800.0 37421.0 25 0 1197.5 -1 0 68 679.7095431112654 3393.511333223327 5 680.1112548708916 MULTI CID FTMS 0 0 0 4014 61453.53515625 0.8942997807922833 1 -0.0162467956542968 1 3 SV 2 -1 5.5732 0.0 0.0 0.16423 0.0 0.0 2685.200982736802 519.2056368463499 3204.406619583152 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SV 0.16423 - 151 + 1 2.195 31890.3 0.4399999976158142 279 3734 4014 HBL1_DMSO_200M_050219_1,4015 HBL1_DMSO_200M_050219_1,4015, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4017 17.825 199.0 344710.0 25 0 6893.4 -1 0 54 804.1549592916105 4015.738414125052 5 804.5559570193291 MULTI CID FTMS 0 0 0 4016 621825.3125 0.3863709213348857 8 -0.0553474426269531 1 3 P{[{M(Oxidation (M))|F}D]|MM} 3 -1 10.458 0.0 0.0 0.26041 0.0 0.0 3638.5788205375193 0.0 3638.5788205375193 0.0 3.4678748622465623 0.0 0.0 0 0.0 0.0 0.0 0.0 P{[{M(Oxidation (M))|F}D]|MM} 0.26041 - 6 1 2.195 59271.7 1.0 280 3735 4016 HBL1_DMSO_200M_050219_1,4017 HBL1_DMSO_200M_050219_1,4017, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4020 17.842 635.0 86150.0 25 0 3763.9 -1 0 43 1004.9415262354436 4015.736999075375 4 1004.944201648235 MULTI CID FTMS 0 0 0 4019 51895.9609375 0.3826124385907394 8 -0.0531482696533203 1 3 D 1 -1 9.732 0.0 0.0 0.24235 0.0 0.0 180.07276032860574 3717.572789872181 3897.645550200787 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D 0.24235 - 7 + 1 2.195 46089.3 1.0 281 3737 4019 HBL1_DMSO_200M_050219_1,4020 HBL1_DMSO_200M_050219_1,4020, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4025 17.87 800.0 9368.9 25 0 977.22 -1 0 24 605.5164719050451 0 605.5156127810478 PEAK CID FTMS 0 0 0 -1 0 1 3 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.25632 0.0 0.0 603.8119222263027 455.12461267642817 1058.936534902731 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.25632 - 1 + 1 2.195 16884.6 0.4799999892711639 282 3741 4024 HBL1_DMSO_200M_050219_1,4025 HBL1_DMSO_200M_050219_1,4025, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4034 17.914 800.0 22778.0 25 0 2598.5 -1 0 41 697.5185320461125 0 697.5160400271416 PEAK CID FTMS 0 0 0 4033 13383.890625 0.2033004890448495 1 -0.016244888305664 1 3 T 1 -1 4.6041 0.0 0.0 0.33051 0.0 0.0 595.6666284459374 693.2952709213976 1288.9618993673348 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.33051 - 5 + 1 2.195 21207.2 0.4799999892711639 283 3749 4033 HBL1_DMSO_200M_050219_1,4034 HBL1_DMSO_200M_050219_1,4034, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4041 17.949 800.0 32268.0 25 0 1174.2 -1 0 49 821.5612547321484 4102.769891327742 5 821.7630493044853 MULTI CID FTMS 0 0 0 4040 62963.66015625 0.3512514759420359 21 -0.1831817626953125 1 3 E 1 -1 1.9897 0.0 0.0 0.048497 0.0 0.0 3163.366462227936 807.3173922174436 3970.683854445379 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.048497 - 1 + 1 2.204 27698.3 0.4799999892711639 284 3755 4040 HBL1_DMSO_200M_050219_1,4041 HBL1_DMSO_200M_050219_1,4041, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4048 17.985 800.0 59919.0 25 0 2888.5 -1 0 62 644.5484776860228 2574.164804877691 4 644.7997924685478 MULTI CID FTMS 0 0 0 4047 62244.4140625 0.4819211337389463 -5 0.0196361541748046 1 3 N 1 -1 11.466 0.0 0.0 0.44542 0.0 0.0 864.3514632423618 1592.7180667984842 2457.069530040846 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.5 N 0.44542 - 49 + 1 2.204 46572.6 0.4900000095367431 285 3761 4047 HBL1_DMSO_200M_050219_1,4048 HBL1_DMSO_200M_050219_1,4048, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4049 17.999 800.0 19235.0 25 0 919.19 -1 0 49 515.8409069945891 2574.168152639945 5 516.2424804568291 MULTI CID FTMS 0 0 0 4047 66366.515625 1.0 0 0.0 2 3 N 1 -1 4.6041 0.0 0.0 0.17886 0.0 0.0 2057.9747455127954 399.13291345767817 2457.107658970473 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.17886 - 15 + 1 2.204 25435.4 0.449999988079071 286 3761 4047 HBL1_DMSO_200M_050219_1,4049 HBL1_DMSO_200M_050219_1,4049, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4051 18.015 800.0 18490.0 25 0 1671.5 -1 0 33 815.7598718947715 4073.7629771408574 5 816.1615478396416 MULTI CID FTMS 0 0 0 4050 27830.310546875 0.2633110583659779 1 -0.0163726806640625 1 3 M 1 -1 0.27759 0.0 0.0 0.006814 0.0 0.0 3127.359914251989 812.3212374322874 3939.681151684276 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.006814 - 1 + 1 2.204 20428.0 0.4000000059604645 287 3762 4050 HBL1_DMSO_200M_050219_1,4051 HBL1_DMSO_200M_050219_1,4051, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4057 18.048 800.0 36151.0 25 0 2979.3 -1 0 49 815.5596539833924 0 815.5607787966728 PEAK CID FTMS 0 0 0 4056 41884.5390625 0.4830030651096608 1 -0.0162925720214843 1 3 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.19022 0.0 0.0 667.6978469298723 811.3325289361936 1479.030375866066 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19022 - 3 + 1 2.213 32925.5 0.4799999892711639 288 3767 4056 HBL1_DMSO_200M_050219_1,4057 HBL1_DMSO_200M_050219_1,4057, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4063 18.079 800.0 19884.0 25 0 793.52 -1 0 45 808.3766185069056 2422.1080261209167 3 808.7111083865166 MULTI CID FTMS 0 0 0 4062 49876.57421875 0.1528423152811443 -11 0.0941390991210937 1 3 G{[YC]|[HE]} 3 -1 13.71 0.0 0.0 0.56604 0.0 0.0 2080.975898290642 0.0 2080.975898290642 0.0 4.246199743006047 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 G{[YC]|[HE]} 0.56604 - 39 + 1 2.213 22031.0 0.4799999892711639 289 3772 4062 HBL1_DMSO_200M_050219_1,4063 HBL1_DMSO_200M_050219_1,4063, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4065 18.095 743.0 164780.0 25 0 2764.4 -1 0 73 804.154908284703 4015.738159090514 5 804.3558227419853 MULTI CID FTMS 0 0 0 4064 305104.0625 0.6763053956997491 2 -0.0330657958984375 1 3 YGD[MN] 5 -1 9.2082 0.0 0.0 0.2293 0.0 0.0 3417.49964373065 0.0 3417.49964373065 0.0 0.2557626122369036 0.0 0.0 0 0.0 0.0 0.0 0.0 YGD[MN] 0.2293 - 58 1 2.213 91882.7 1.0 290 3773 4064 HBL1_DMSO_200M_050219_1,4065 HBL1_DMSO_200M_050219_1,4065, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4066 18.109 800.0 35963.0 25 0 1496.8 -1 0 68 837.3871093865926 2509.1394987599774 3 837.7219116091728 MULTI CID FTMS 0 0 0 4064 82143.8046875 0.3007645370859728 -11 0.0803260803222656 2 3 W 1 -1 6.9897 0.0 0.0 0.27857 0.0 0.0 1572.694321613296 747.3376558893186 2320.0319775026146 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.27857 - 60 + 1 2.213 26226.9 0.3600000143051147 291 3773 4064 HBL1_DMSO_200M_050219_1,4066 HBL1_DMSO_200M_050219_1,4066, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4070 18.133 800.0 53582.0 25 0 2623.8 + 25573 NEYNRLADAN 10 79 590.2733042854213 1178.5320556376423 2 590.2736083865166 MULTI CID FTMS 0 0 0 4069 62857.48046875 0.5833560092083991 1 -0.0163116455078125 1 Unmodified _NEYNRLADAN_ REV__ENSG00000068878|ENST00000404125|PSME4;REV__nc|ENSG00000068878|Q14997-2|PSME4;REV__nc|ENSG00000068878|Q14997-3|PSME4 13.042465956692816 0.6287021003332052 3 DQQAES[QT]GQ 10 -1 50.533 0.0 0.0 4.2878 0.0 0.0 88.06211655552472 0.0 88.06211655552472 0.0 33.609529956308705 0.0 0.0 0 0.0 0.0 0.0 1.2174165578762484 DQQAES[QT]GQ 4.2878 - 210 + 1 2.218 39303.5 0.550000011920929 292 3776 4069 HBL1_DMSO_200M_050219_1,4070 HBL1_DMSO_200M_050219_1,4070,NEYNRLADAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4074 18.157 800.0 23581.0 25 0 2126.2 -1 0 52 708.3246517381825 2121.9521258147474 3 708.6578246951103 MULTI CID FTMS 0 0 0 4073 59085.23828125 0.326232195698498 -15 0.1210765838623046 1 3 A{[YC]|[HE]} 3 -1 7.4473 0.0 0.0 0.35096 0.0 0.0 1766.8023893418942 0.0 1766.8023893418942 0.0 0.4575749056067497 0.0 0.0 0 0.0 0.0 0.0 0.0 A{[YC]|[HE]} 0.35096 - 25 + 1 2.218 23900.1 0.5 293 3779 4073 HBL1_DMSO_200M_050219_1,4074 HBL1_DMSO_200M_050219_1,4074, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4075 18.171 800.0 19138.0 25 0 891.3 45502 YTRRRWCKRRR 11 45 818.9648028756228 0 818.9648925662041 PEAK CID FTMS 0 0 0 4073 57006.53515625 0.985136552544246 2 -0.0337867736816406 2 Unmodified _YTRRRWCKRRR_ ENSG00000152092|ENST00000361833|ASTN1;ENST00000281881.7_1_1:176905297-177133812:-|nuORF;nc|ENSG00000152092|O14525-3|ASTN1;nc|ENSG00000152092|O14525|ASTN1 0.0 0.4761840153648598 3 D 1 11 3.9794 0.0 0.0 0.24325 0.0 0.0 627.4735988158956 890.3705538385374 1517.844152654433 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.24325 - 6 + 1 2.218 22016.1 0.4300000071525574 294 3779 4073 HBL1_DMSO_200M_050219_1,4075 HBL1_DMSO_200M_050219_1,4075,YTRRRWCKRRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4078 18.19 800.0 46969.0 25 0 8810.1 -1 0 58 628.2916914298195 2509.1376598528777 4 628.5411865115166 MULTI CID FTMS 0 0 0 -1 0 1 3 GWES 4 -1 14.781 0.0 0.0 0.5891 0.0 0.0 1587.715981241353 459.1984652154906 2046.9144464568435 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GWES 0.5891 - 87 + 1 2.218 39353.4 0.4300000071525574 295 3781 4077 HBL1_DMSO_200M_050219_1,4078 HBL1_DMSO_200M_050219_1,4078, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4083 18.219 800.0 24776.0 25 0 1306.5 -1 0 51 847.3749508878085 2539.1030232636253 3 847.7090331912041 MULTI CID FTMS 0 0 0 4082 75798.1875 0.2043603534804185 -16 0.1509628295898437 1 3 S[WP] 3 -1 7.4473 0.0 0.0 0.2933 0.0 0.0 2150.9338165759286 0.0 2150.9338165759286 0.0 1.2493873660830008 0.0 0.0 0 0.0 0.0 0.0 0.0 S[WP] 0.2933 - 33 + 1 2.218 24490.1 0.4900000095367431 296 3785 4082 HBL1_DMSO_200M_050219_1,4083 HBL1_DMSO_200M_050219_1,4083, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4084 18.232 800.0 29831.0 25 0 3103.4 -1 0 49 606.5341775449231 2422.107604313292 4 606.7851440310478 MULTI CID FTMS 0 0 0 4082 72744.984375 1.0 0 0.0 2 3 S 1 -1 5.4846 0.0 0.0 0.22644 0.0 0.0 1959.8898592446208 372.1632174127563 2332.053076657377 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.22644 - 25 + 1 2.218 27539.3 0.4699999988079071 297 3785 4082 HBL1_DMSO_200M_050219_1,4084 HBL1_DMSO_200M_050219_1,4084, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4087 18.246 394.0 56502.0 25 0 3125.9 -1 0 58 818.3640811854054 2452.070414156416 3 818.6991454958916 MULTI CID FTMS 0 0 0 4086 104364.4453125 0.2810251124697983 -14 0.156900405883789 1 3 V 1 -1 3.4949 0.0 0.0 0.14253 0.0 0.0 1345.084038279266 1004.918100225256 2350.002138504522 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.14253 - 25 + 1 2.218 25579.0 1.0 298 3787 4086 HBL1_DMSO_200M_050219_1,4087 HBL1_DMSO_200M_050219_1,4087, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4107 18.333 800.0 21876.0 25 0 860.06 -1 0 45 808.3766185069056 2422.1080261209167 3 808.7100097537041 MULTI CID FTMS 0 0 0 4106 77856.515625 0.238584351356155 23 -0.2088508605957031 1 3 S{[YC]|[HE]} 3 -1 5.6864 0.0 0.0 0.23477 0.0 0.0 2050.963996435173 0.0 2050.963996435173 0.0 0.2018122933698425 0.0 0.0 0 0.0 0.0 0.0 0.0 S{[YC]|[HE]} 0.23477 - 17 + 1 2.22 23693.1 0.5299999713897705 299 3806 4106 HBL1_DMSO_200M_050219_1,4107 HBL1_DMSO_200M_050219_1,4107, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4108 18.346 800.0 42760.0 25 0 2290.6 -1 0 37 1004.9408735937444 4015.7343885085775 4 1005.445117175579 MULTI CID FTMS 0 0 0 4106 62678.3359375 0.97004769574547 1 -0.0301399230957031 2 3 N 1 -1 6.9897 0.0 0.0 0.17406 0.0 0.0 3030.31258782674 868.3528536432249 3898.665441469965 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.17406 - 1 + 1 2.22 32976.1 0.4199999868869781 300 3806 4106 HBL1_DMSO_200M_050219_1,4108 HBL1_DMSO_200M_050219_1,4108, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4110 18.363 800.0 160420.0 25 0 2161.0 -1 0 63 804.1547990521098 4015.737612927549 5 804.5557739138603 MULTI CID FTMS 0 0 0 4109 274342.5625 0.7410347824442791 1 -0.0300788879394531 1 3 CR{[{M(Oxidation (M))|F}D]|MM} 4 -1 13.812 0.0 0.0 0.34395 0.0 0.0 3476.551373021411 0.0 3476.551373021411 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 CR{[{M(Oxidation (M))|F}D]|MM} 0.34395 - 41 1 2.22 100069.7 0.9300000071525574 301 3807 4109 HBL1_DMSO_200M_050219_1,4110 HBL1_DMSO_200M_050219_1,4110, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4111 18.377 800.0 12271.0 25 0 620.89 -1 0 32 821.3605849156768 4101.766542245384 5 821.7643310427666 MULTI CID FTMS 0 0 0 4109 59557.4609375 0.9697924914994452 3 -0.0503292083740234 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 20818.9 0.3100000023841858 302 3807 4109 HBL1_DMSO_200M_050219_1,4111 HBL1_DMSO_200M_050219_1,4111, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4114 18.397 800.0 13511.0 25 0 933.71 -1 0 36 837.3871093865926 2509.1394987599774 3 837.3854247927666 MULTI CID FTMS 0 0 0 4113 62431.828125 0.2767322843562034 28 -0.1882133483886718 1 3 {I|L} 1 -1 4.6041 0.0 0.0 0.18349 0.0 0.0 2164.968369464859 228.06234155826408 2393.030711023123 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.18349 - 13 + 1 2.22 16669.5 0.4199999868869781 303 3809 4113 HBL1_DMSO_200M_050219_1,4114 HBL1_DMSO_200M_050219_1,4114, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4119 18.425 800.0 56228.0 25 0 5113.8 -1 0 79 632.952860566548 1895.836752299844 3 632.9518920779228 MULTI CID FTMS 0 0 0 4118 98756.7265625 0.5373788716169436 -20 0.1431083679199218 1 3 Q 1 -1 13.979 0.0 0.0 0.73737 0.0 0.0 1749.7675974920296 0.0 1749.7675974920296 0.0 11.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.73737 - 27 + 1 2.22 39614.9 0.4799999892711639 304 3813 4118 HBL1_DMSO_200M_050219_1,4119 HBL1_DMSO_200M_050219_1,4119, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4126 18.461 800.0 18557.0 25 0 1095.9 -1 0 41 835.772057458379 0 835.7733642458916 PEAK CID FTMS 0 0 0 4125 27482.9609375 0.401423449128314 -4 0.0157356262207031 1 3 N 1 -1 1.1092 0.0 0.0 0.06644 0.0 0.0 720.0990332743767 832.3486422174436 1552.4476754918203 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.06644 - 1 + 1 2.22 19798.7 0.4099999964237213 305 3819 4125 HBL1_DMSO_200M_050219_1,4126 HBL1_DMSO_200M_050219_1,4126, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4128 18.469 332.0 80581.0 25 0 3722.4 -1 0 60 847.3749508878085 2539.1030232636253 3 847.3752929568291 MULTI CID FTMS 0 0 0 4127 189506.34375 0.6382402797385912 8 -0.0483303070068359 1 3 SGN[YQ] 5 -1 22.218 0.0 0.0 0.87505 0.0 0.0 1971.8437754018728 0.0 1971.8437754018728 0.0 11.73393743112328 0.0 0.0 0 0.0 0.0 0.0 0.0 SGN[YQ] 0.87505 - 155 1 2.22 29052.7 1.0 306 3820 4127 HBL1_DMSO_200M_050219_1,4128 HBL1_DMSO_200M_050219_1,4128, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4135 18.505 800.0 37627.0 25 0 1417.0 -1 0 68 818.3640811854054 2452.070414156416 3 818.3636352419853 MULTI CID FTMS 0 0 0 4134 96578.859375 0.338880027842667 26 -0.3310279846191406 1 3 NTS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V 6 -1 18.416 0.0 0.0 0.75105 0.0 0.0 1121.469758531439 669.2647799127561 1790.734538444195 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NTS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V 0.75105 - 310 + 1 2.22 30435.7 0.5899999737739563 307 3826 4134 HBL1_DMSO_200M_050219_1,4135 HBL1_DMSO_200M_050219_1,4135, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4138 18.525 800.0 112390.0 25 0 8681.2 + 21606 LPKQEKRHV 9 111 378.8966082608433 1133.66799538273 3 378.8960143923759 MULTI CID FTMS 0 0 0 4137 53310.421875 0.4380136743391586 -11 0.0725421905517578 1 Unmodified _LPKQEKRHV_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;ENST00000569569.5_1_16:56966069-56970730:+|nuORF;ENST00000570273.5_1_16:56966069-56976120:+|nuORF 20.580933911654288 0.2795815587326093 3 {I|L}PKQEG 6 4 50.649 0.0 0.0 4.4677 0.0 0.0 0.0 478.2975252740844 478.2975252740844 28.29769650766023 0.0 0.0 0.0 0 0.0 0.958607314841775 0.3807196863200844 0.0 {I|L}PKQEG 4.4677 - 96 + 1 2.227 76864.8 0.4900000095367431 308 3828 4137 HBL1_DMSO_200M_050219_1,4138 HBL1_DMSO_200M_050219_1,4138,LPKQEKRHV False True LPKQEKRHV 18.525209 378.896014392376 654079.4375 4137.0 ENST00000569569.5_1_16:56966069-56970730:+|nuORF;;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;;ENSG00000051108|ENST00000439977|HERPUD1 4.484360853830974 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4144 18.557 800.0 45692.0 25 0 4143.4 -1 0 24 855.9849521647558 4274.888378490778 5 856.5863525271416 MULTI CID FTMS 0 0 0 4143 48593.359375 0.7001572664920162 -4 0.0156059265136718 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.227 34066.7 0.4399999976158142 309 3833 4143 HBL1_DMSO_200M_050219_1,4144 HBL1_DMSO_200M_050219_1,4144, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4151 18.593 800.0 160660.0 25 0 18321.0 + 37285 TIQESEVSAEK 11 142 407.5388213714003 1219.5946347144009 3 407.5383483767509 MULTI CID FTMS 0 0 0 4150 126495.4609375 0.0690438070361029 -9 0.0474472045898437 1 Unmodified _TIQESEVSAEK_ REV__ENSG00000144395|ENST00000389175|CCDC150 17.44264345198275 0.6723198055858692 3 [VS]QHHVDAAEK 11 -1 [VS]Q + + 55.585 26.923 8.57 4.5576 4.5576 54.183 0.0 0.0 0.0 0.0 23.816504588559937 0.0 0.0 0 1.274227503252014 0.0 0.3494850021680094 0.3252574989159953 [VS]QHHVDAAEK 4.5576 - 2707 + 1 2.227 106745.4 0.6499999761581421 310 3839 4150 HBL1_DMSO_200M_050219_1,4151 HBL1_DMSO_200M_050219_1,4151,TIQESEVSAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4152 18.607 800.0 82482.0 25 0 6480.4 -1 CEAELQELMKQ 11 101 465.5481843820753 1393.622723746426 3 465.5477172732353 MULTI CID FTMS 0 0 0 4150 92123.7890625 0.5921538483325016 -1 0.0039520263671875 2 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))EAELQELM(Oxidation (M))KQ_ ENSG00000182923|ENST00000675561|CEP63;ENST00000504013.5_1_3:134204904-134251604:+|nuORF;nc|ENSG00000182923|Q96MT8-2|CEP63;nc|ENSG00000182923|Q96MT8-3|CEP63;nc|ENSG00000182923|Q96MT8-4|CEP63 3.84590784869206 0.857002691623471 3 HKQ{[ES]|[DT]|[{I|L}C]}SSGH 9 -1 32.507 0.0 0.0 2.3325 0.0 0.0 398.17975240434015 0.0 398.17975240434015 0.0 21.52065151321604 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.5 HKQ{[ES]|[DT]|[{I|L}C]}SSGH 2.3325 - 195 + 1 2.227 62388.4 0.5699999928474426 311 3839 4150 HBL1_DMSO_200M_050219_1,4152 HBL1_DMSO_200M_050219_1,4152,CEAELQELMKQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4153 18.62 800.0 29557.0 25 0 1450.3 -1 0 52 682.6411647665445 2044.9016648998336 3 682.6415283083916 MULTI CID FTMS 0 0 0 4150 71442.09375 1.0 0 0.0 3 3 S[DG] 3 -1 5.6864 0.0 0.0 0.27808 0.0 0.0 1767.8105221769804 0.0 1767.8105221769804 0.0 0.2018122933698425 0.0 0.0 0 0.0 0.0 0.0 0.0 S[DG] 0.27808 - 12 + 1 2.227 27950.3 0.5 312 3839 4150 HBL1_DMSO_200M_050219_1,4153 HBL1_DMSO_200M_050219_1,4153, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4154 18.634 800.0 38911.0 25 0 2763.4 -1 0 29 838.9790017649152 4189.858626491576 5 839.3831664919853 MULTI CID FTMS 0 0 0 4150 57822.19140625 1.0 0 0.0 4 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.227 30164.4 0.4399999976158142 313 3839 4150 HBL1_DMSO_200M_050219_1,4154 HBL1_DMSO_200M_050219_1,4154, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4156 18.651 800.0 85080.0 25 0 2154.4 -1 0 62 804.1547990521098 4015.737612927549 5 804.7574951052666 MULTI CID FTMS 0 0 0 4155 121150.328125 0.4635241453542645 36 -0.3811855316162109 1 3 N{[{M(Oxidation (M))|F}D]|MM} 3 -1 7.4473 0.0 0.0 0.18545 0.0 0.0 3621.569227220145 0.0 3621.569227220145 0.0 0.4575749056067497 0.0 0.0 0 0.0 0.0 0.0 0.0 N{[{M(Oxidation (M))|F}D]|MM} 0.18545 - 13 1 2.227 60323.1 0.5400000214576721 314 3840 4155 HBL1_DMSO_200M_050219_1,4156 HBL1_DMSO_200M_050219_1,4156, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4157 18.664 800.0 70464.0 25 0 3981.1 -1 0 40 741.544960832986 3702.68842183193 5 741.9449340701103 MULTI CID FTMS 0 0 0 4155 81788.578125 0.7758973102833128 -2 0.0616893768310546 2 3 M 1 -1 3.9794 0.0 0.0 0.10747 0.0 0.0 3273.6045117750923 295.03042193966513 3568.6349337147576 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.10747 - 3 + 1 2.227 47241.8 0.3799999952316284 315 3840 4155 HBL1_DMSO_200M_050219_1,4157 HBL1_DMSO_200M_050219_1,4157, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4161 18.689 800.0 21001.0 25 0 1154.7 -1 KRDHMMWWFYQ 11 33 830.3659473779333 0 830.3655883669853 PEAK CID FTMS 0 0 0 4160 28557.44921875 0.4376367744559776 1 -0.016275405883789 1 2 Oxidation (M) _KRDHM(Oxidation (M))M(Oxidation (M))WWFYQ_ ENST00000497113.1_1_1:8025465-8030966:+|nuORF 0.2690200627634905 0.4761840153648598 3 P 1 -1 3.9794 0.0 0.0 0.23991 0.0 0.0 731.3242276642665 827.3297823541624 1558.6540100184288 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.23991 - 5 + 1 2.238 20285.5 0.4399999976158142 316 3843 4160 HBL1_DMSO_200M_050219_1,4161 HBL1_DMSO_200M_050219_1,4161,KRDHMMWWFYQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4164 18.709 800.0 90864.0 25 0 5982.4 + 35651 SVDARMREEK 10 90 610.804587751104 1219.594622569008 2 610.8044921755791 MULTI CID FTMS 0 0 0 4163 100106.09375 0.7061105972743039 -2 0.0199832916259765 1 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 33.4449034751529 0.2267874087365337 3 [VS]QHHVDAAEK 11 -1 + 117.29 0.0 0.0 9.6173 9.6173 92.654 0.0 0.0 0.0 7.151060511333569 7.151060511333569 7.151060511333569 7.151060511333569 0 3.809894379144197 1.6989700043360187 0.5 0.805462187404089 [VS]QHHVDAAEK;[VS]AGHHVDAAEK;[VS][AG]HHVDAAEK;[VS]AGHHVD[DV]GK;[VS]QHHA[DV]AEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHHVDAAEK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}V[NG]AAEK;WQHHVWAEK;[VS][AG]HHA[DV]AEK;[VS]QHHVD[DV]GK 9.6173;9.031;8.8688;7.5992;7.5684;7.1748;7.1216;6.9607;6.82;6.7449 -;-;-;-;-;-;-;-;-;- 1275 + 1 2.238 62220.2 0.5199999809265137 317 3845 4163 HBL1_DMSO_200M_050219_1,4164 HBL1_DMSO_200M_050219_1,4164,SVDARMREEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4165 18.722 800.0 86545.0 25 0 11526.0 + 11973 GPEAGRKPA 9 89 441.742974294469 881.471395655738 2 441.7424194216728 MULTI CID FTMS 0 0 0 4163 110601.7421875 1.0 0 0.0 2 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 39.94969957227396 0.0757326808254658 3 GPEA[RK]GAP 9 3 + 74.715 0.0 0.0 8.4762 8.4762 88.49 0.0 0.0 0.0 59.57711861032834 1.7120467177745269 1.7120467177745269 4.220449851406514 0 1.6861818737241734 2.0 0.5 0.0 GPEA[RK]GAP;GPEA[RK]QP;GPEA[RK]AGP;GPE[W{I|L}]{I|L}AP;[VS]{I|L}[W{I|L}][HQ] 8.4762;7.9974;7.4301;7.3093;1.6202 -;-;-;-;- 146 + 1 2.238 60767.2 0.5400000214576721 318 3845 4163 HBL1_DMSO_200M_050219_1,4165 HBL1_DMSO_200M_050219_1,4165,GPEAGRKPA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4166 18.736 800.0 31285.0 25 0 3831.2 -1 0 53 632.952860566548 1895.836752299844 3 633.2870361208916 MULTI CID FTMS 0 0 0 4163 84059.21875 0.7104024474715783 14 -0.2074737548828125 3 3 Q 1 -1 13.495 0.0 0.0 0.71181 0.0 0.0 1749.7670481756234 0.0 1749.7670481756234 0.0 -0.4845500650402812 -0.4845500650402812 0.0 0 0.0 0.0 0.0 0.0 Q 0.71181 - 79 + 1 2.238 26131.7 0.4799999892711639 319 3845 4163 HBL1_DMSO_200M_050219_1,4166 HBL1_DMSO_200M_050219_1,4166, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4168 18.752 800.0 23246.0 25 0 1599.6 -1 0 33 835.5688790602867 4172.808012968433 5 835.9702636599541 MULTI CID FTMS 0 0 0 4167 38069.4921875 0.5759341106779398 1 -0.0379447937011718 1 3 P 1 -1 0.9691 0.0 0.0 0.023224 0.0 0.0 3249.4079408022208 823.3379610650999 4072.7459018673208 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.023224 - 1 + 1 2.238 23200.7 0.3300000131130218 320 3846 4167 HBL1_DMSO_200M_050219_1,4168 HBL1_DMSO_200M_050219_1,4168, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4169 18.76 442.0 122550.0 25 0 7726.5 + -1 CFRFCFFHWEK 11 98 555.2487814010892 1662.7245148034676 3 555.2487060427666 MULTI CID FTMS 0 0 0 4167 155957.453125 0.2839713449825212 -9 0.1674137115478515 2 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))FRFC(Carbamidomethyl (C))FFHWEK_ REV__ENST00000268607.9_1_16:87437433-87437484:+|nuORF 0.0948413911109767 0.8747004676205551 3 QGYHEH 6 -1 38.836 0.0 0.0 2.3357 0.0 0.0 893.4099528911614 0.0 893.4099528911614 0.0 26.071727937883047 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.5 QGYHEH 2.3357 - 487 + 1 2.238 51154.7 1.0 321 3846 4167 HBL1_DMSO_200M_050219_1,4169 HBL1_DMSO_200M_050219_1,4169,CFRFCFFHWEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4170 18.774 800.0 142000.0 25 0 12169.0 + -1 CFRFCFFHWEK 11 116 416.68837263046754 1662.7243846554702 4 416.6880065798759 MULTI CID FTMS 0 0 0 4167 106832.375 0.2949735690554534 -10 0.1711616516113281 3 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))FRFC(Carbamidomethyl (C))FFHWEK_ REV__ENST00000268607.9_1_16:87437433-87437484:+|nuORF 0.0948413911109767 0.8747004676205551 3 QGHYHE 6 -1 44.047 0.0 0.0 2.6491 0.0 0.0 893.4099864778872 0.0 893.4099864778872 0.0 31.45941273191451 0.0 0.0 0 0.0 0.0 1.086696871556164 0.5 QGHYHE 2.6491 - 1334 + 1 2.238 101095.3 0.4399999976158142 322 3846 4167 HBL1_DMSO_200M_050219_1,4170 HBL1_DMSO_200M_050219_1,4170,CFRFCFFHWEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4173 18.794 800.0 41276.0 25 0 3090.4 -1 0 63 684.3090125394364 2733.2069442913453 4 684.5602905154228 MULTI CID FTMS 0 0 0 4172 51269.07421875 0.5946336788295294 1 -0.0300788879394531 1 3 P{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3 -1 13.512 0.0 0.0 0.49437 0.0 0.0 2324.0336614194653 0.0 2324.0336614194653 0.0 13.02764671460736 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 P{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 0.49437 - 40 1 2.245 35469.4 0.4799999892711639 323 3848 4172 HBL1_DMSO_200M_050219_1,4173 HBL1_DMSO_200M_050219_1,4173, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4174 18.808 800.0 58535.0 25 0 5145.1 -1 0 81 590.2668740555059 1767.7787927667175 3 590.2664672732353 MULTI CID FTMS 0 0 0 4172 102126.046875 0.9517683656028672 -2 0.0418529510498046 2 3 Q[SG]HEH 6 -1 18.082 0.0 0.0 1.0229 0.0 0.0 1074.4943211864424 0.0 1074.4943211864424 0.0 5.86365002801444 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.5 Q[SG]HEH 1.0229 - 206 + 1 2.245 41381.0 0.5099999904632568 324 3848 4172 HBL1_DMSO_200M_050219_1,4174 HBL1_DMSO_200M_050219_1,4174, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4181 18.832 33.0 1132800.0 25 0 192050.0 + 35652 SVDARMREEK 10 68 407.5388213714003 1219.5946347144009 3 407.5385314822197 MULTI CID FTMS 0 0 0 4180 1283931.0 0.7007957720749398 6 -0.0883045196533203 1 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 13.90604991867851 0.6142120002215601 3 [VS]QHHVDAAEK 11 -1 [VS]Q + + 44.628 23.952 7.6243 3.6592 3.6592 51.631 0.0 0.0 0.0 0.0 20.19077524932108 0.0 0.0 0 0.8494850021680094 0.0 0.3494850021680094 0.3252574989159953 [VS]QHHVDAAEK 3.6592 - 172 + 1 2.245 36631.3 1.0 325 3854 4180 HBL1_DMSO_200M_050219_1,4181 HBL1_DMSO_200M_050219_1,4181,SVDARMREEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4182 18.846 800.0 107100.0 25 0 4770.0 -1 0 97 451.02540101909113 1800.0724982099646 4 451.0253784060478 MULTI CID FTMS 0 0 0 4180 69345.6796875 0.6936841410134025 -11 0.1553611755371093 2 3 V{I|L}{I|L}PQK[NS]{I|L} 9 -1 86.916 0.0 0.0 4.8285 0.0 0.0 0.0 804.4020479791624 804.4020479791624 72.30130376354437 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.6549471895720984 0.0 V{I|L}{I|L}PQK[NS]{I|L} 4.8285 - 155 + 1 2.245 76599.3 0.5 326 3854 4180 HBL1_DMSO_200M_050219_1,4182 HBL1_DMSO_200M_050219_1,4182, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4185 18.866 800.0 225390.0 25 0 19562.0 18092 KTIKTKLPV 9 200 343.2336483420031 0 343.2335693240166 PEAK CID FTMS 0 0 0 4184 87123.0234375 0.5131208134290518 -41 0.4214115142822265 1 Unmodified _KTIKTKLPV_ ENSG00000136152|ENST00000349995|COG3;ENST00000486940.2_1_13:46090326-46105393:+|nuORF 7.101721422024254 0.3444685223463735 3 GD 2 9 11.727 0.0 0.0 1.7133 0.0 0.0 456.3413068385 53.040490972326566 509.3817978108265 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.5669015600442578 0.0 GD 1.7133 - 19 + 1 2.245 144485.5 0.5 327 3856 4184 HBL1_DMSO_200M_050219_1,4185 HBL1_DMSO_200M_050219_1,4185,KTIKTKLPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4188 18.886 800.0 23829.0 25 0 1524.8 + -1 MYEMCGEEEMC 11 43 734.7318370845535 0 734.7321655154228 PEAK CID FTMS 0 0 0 4187 22324.103515625 0.309180110705986 1 -0.0295467376708984 1 2 Carbamidomethyl (C) _MYEMC(Carbamidomethyl (C))GEEEMC(Carbamidomethyl (C))_ REV__ENSG00000171680|ENST00000377728|PLEKHG5;REV__nc|ENSG00000171680|O94827-3|PLEKHG5;REV__nc|ENSG00000171680|O94827-4|PLEKHG5;REV__nc|ENSG00000171680|O94827-7|PLEKHG5 0.0 0.4761840153648598 3 DWQG 4 -1 15.918 0.0 0.0 1.0847 0.0 0.0 185.9400006071017 792.3358858697874 978.2758864768892 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DWQG 1.0847 - 31 + 1 2.245 21432.8 0.4099999964237213 328 3858 4187 HBL1_DMSO_200M_050219_1,4188 HBL1_DMSO_200M_050219_1,4188,MYEMCGEEEMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4189 18.9 768.0 29176.0 25 0 1563.6 -1 0 55 641.0447743636533 2560.149991588213 4 641.2957031130791 MULTI CID FTMS 0 0 0 4187 92709.6875 0.9521793622952108 -5 0.0465106964111328 2 3 S{[HG]|PP} 3 -1 10.458 0.0 0.0 0.40848 0.0 0.0 2261.026866443485 0.0 2261.026866443485 0.0 3.4678748622465623 0.0 0.0 0 0.0 0.0 0.0 0.0 S{[HG]|PP} 0.40848 - 151 + 1 2.245 29398.6 1.0 329 3858 4187 HBL1_DMSO_200M_050219_1,4189 HBL1_DMSO_200M_050219_1,4189, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4191 18.916 800.0 13342.0 25 0 1121.2 -1 0 29 804.1547990521098 4015.737612927549 5 804.7539550662041 MULTI CID FTMS 0 0 0 4190 30083.9609375 0.1151019770085807 55 -0.3545188903808594 1 3 M 1 -1 5.4846 0.0 0.0 0.13658 0.0 0.0 3081.3317424214924 800.3244722955686 3881.656214717061 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.13658 - 2 + 1 2.245 17906.3 0.3100000023841858 330 3859 4190 HBL1_DMSO_200M_050219_1,4191 HBL1_DMSO_200M_050219_1,4191, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4199 18.956 800.0 88546.0 25 0 15123.0 -1 EMSRCRNSY 9 117 387.8293046571923 1160.466084571777 3 387.8290893435478 MULTI CID FTMS 0 0 0 4198 122236.78125 0.9096409343617976 -23 0.2672100067138672 1 Oxidation (M) _EM(Oxidation (M))SRCRNSY_ ENSG00000164741|ENST00000276297|DLC1;nc|ENSG00000164741|Q96QB1-1|DLC1;nc|ENSG00000164741|Q96QB1-4|DLC1;nc|ENSG00000164741|Q96QB1-6|DLC1 4.5288652416199255 0.7565837746943351 3 {M(Oxidation (M))|F} 1 -1 16.99 0.0 0.0 1.464 0.0 0.0 995.4199705354472 0.0 995.4199705354472 0.0 4.225490200071285 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.464 + + 196 + 1 2.249 60461.0 0.5099999904632568 331 3866 4198 HBL1_DMSO_200M_050219_1,4199 HBL1_DMSO_200M_050219_1,4199,EMSRCRNSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4202 18.976 800.0 36890.0 25 0 1998.4 -1 0 70 623.6244165704406 1867.851420311522 3 623.6254150271416 MULTI CID FTMS 0 0 0 4201 84750.421875 0.7468717157137296 -8 0.0436649322509765 1 3 D 1 -1 11.594 0.0 0.0 0.6207 0.0 0.0 1734.8139885261687 0.0 1734.8139885261687 0.0 3.851518780601921 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.6207 - 40 + 1 2.249 29257.7 0.4699999988079071 332 3868 4201 HBL1_DMSO_200M_050219_1,4202 HBL1_DMSO_200M_050219_1,4202, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4210 19.015 800.0 50353.0 25 0 6046.5 -1 MLQCYRCRQWF 11 76 555.2487814010892 1662.7245148034676 3 555.2476074099541 MULTI CID FTMS 0 0 0 4209 95630.9140625 0.1741272298571721 20 -0.129983901977539 1 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LQC(Carbamidomethyl (C))YRC(Carbamidomethyl (C))RQWF_ ENSG00000119403|ENST00000373896|PHF19;ENST00000474402.5_1_9:123628304-123631123:-|nuORF;ENST00000487555.5_1_9:123623373-123629236:-|nuORF 0.0948413911109767 0.8747004676205551 3 QGYHEH 6 -1 30.812 0.0 0.0 1.8531 0.0 0.0 893.4109904888177 0.0 893.4109904888177 0.0 18.593662748651816 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.5 QGYHEH 1.8531 - 363 + 1 2.249 39782.6 0.5600000023841858 333 3875 4209 HBL1_DMSO_200M_050219_1,4210 HBL1_DMSO_200M_050219_1,4210,MLQCYRCRQWF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4217 19.051 800.0 43209.0 25 0 5234.0 -1 0 57 642.9565794397433 1925.8479089194293 3 642.9564697146416 MULTI CID FTMS 0 0 0 4216 70307.234375 0.4413931647013226 -32 0.2269935607910156 1 3 Q 1 -1 15.485 0.0 0.0 0.80404 0.0 0.0 1779.7786473000924 0.0 1779.7786473000924 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.80404 - 60 + 1 2.249 38501.7 0.5 334 3881 4216 HBL1_DMSO_200M_050219_1,4217 HBL1_DMSO_200M_050219_1,4217, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4229 19.107 800.0 71019.0 25 0 3883.2 -1 0 76 451.02540101909113 1800.0724982099646 4 451.0248901247978 MULTI CID FTMS 0 0 0 4228 35457.48828125 0.3546911272874196 27 -0.2168292999267578 1 3 [{I|L}V]{I|L}PK 5 -1 43.015 0.0 0.0 2.3896 0.0 0.0 0.0 1246.6670767506173 1246.6670767506173 36.025684359364405 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [{I|L}V]{I|L}PK 2.3896 - 27 + 1 2.249 54666.3 0.5 335 3892 4228 HBL1_DMSO_200M_050219_1,4229 HBL1_DMSO_200M_050219_1,4229, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4232 19.115 73.0 721450.0 25 0 187170.0 + 4103 DAPAGRKV 8 62 407.2325339633345 812.4505149934689 2 407.2323791384697 MULTI CID FTMS 0 0 0 4231 745963.0 0.1102638489062015 -23 0.1271572113037109 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 21.74664581756881 0.5868176546531598 3 DAPA 4 4 59.993 0.0 0.0 7.3842 0.0 0.0 0.0 455.27257222054726 455.27257222054726 54.88707973807409 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + DAPA 7.3842 + + 20 + 1 2.249 46736.2 1.0 336 3894 4231 HBL1_DMSO_200M_050219_1,4232 HBL1_DMSO_200M_050219_1,4232,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4233 19.129 800.0 215580.0 25 0 24561.0 18093 KTIKTKLPV 9 167 343.2336483420031 0 343.2336913943291 PEAK CID FTMS 0 0 0 4231 145890.84375 0.859240479303995 -3 0.0241832733154296 2 Unmodified _KTIKTKLPV_ ENSG00000136152|ENST00000349995|COG3;ENST00000486940.2_1_13:46090326-46105393:+|nuORF 10.799506525563784 0.3031001954684014 3 D 1 9 9.1213 0.0 0.0 1.3326 0.0 0.0 470.3208448023672 96.08237634830311 566.4032211506703 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.2215141619232908 0.0 D 1.3326 - 16 + 1 2.249 139064.3 0.5 337 3894 4231 HBL1_DMSO_200M_050219_1,4233 HBL1_DMSO_200M_050219_1,4233,KTIKTKLPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4244 19.181 800.0 21320.0 25 0 1330.1 -1 0 49 842.3748211961733 2524.10263418872 3 842.7114135622978 MULTI CID FTMS 0 0 0 4243 71254.875 0.5152463505598006 -8 0.0313529968261718 1 3 QK 2 -1 8.5835 0.0 0.0 0.34006 0.0 0.0 1745.7537705186012 519.1867159479124 2264.940486466513 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QK 0.34006 - 28 + 1 2.249 22973.4 0.449999988079071 338 3904 4243 HBL1_DMSO_200M_050219_1,4244 HBL1_DMSO_200M_050219_1,4244, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4248 19.205 800.0 15327.0 25 0 1342.8 -1 0 34 671.9673057409251 2012.8800878229752 3 672.3024169802666 MULTI CID FTMS 0 0 0 4247 39629.921875 0.5151564852451691 1 -0.0162773132324218 1 3 S 1 -1 6.9897 0.0 0.0 0.34725 0.0 0.0 1677.7572515015593 245.06792627506096 1922.82517777662 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.34725 - 11 + 1 2.246 18473.1 0.4600000083446502 339 3907 4247 HBL1_DMSO_200M_050219_1,4248 HBL1_DMSO_200M_050219_1,4248, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4255 19.24 800.0 10003.0 25 0 954.88 -1 0 24 804.5565063357353 0 804.5565063357353 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.246 19014.7 0.4699999988079071 340 3913 4254 HBL1_DMSO_200M_050219_1,4255 HBL1_DMSO_200M_050219_1,4255, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4256 19.254 800.0 73277.0 25 0 16123.0 + -1 TNHQCTCQL 9 103 387.8293046571923 1160.466084571777 3 387.8289672732353 MULTI CID FTMS 0 0 0 4254 101122.515625 0.7525163756562878 24 -0.2219142913818359 2 2 Carbamidomethyl (C) _TNHQC(Carbamidomethyl (C))TC(Carbamidomethyl (C))QL_ REV__ENSG00000130702|ENST00000252999|LAMA5;REV__ENST00000370677.4_1_20:60920618-60942301:-|nuORF;REV__nc|ENSG00000130702|O15230-2|LAMA5 4.189502756095605 0.7684307469601125 3 {M(Oxidation (M))|F} 1 -1 16.99 0.0 0.0 1.464 0.0 0.0 995.4197874299786 0.0 995.4197874299786 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.464 - 26 + 1 2.246 54924.4 0.5699999928474426 341 3913 4254 HBL1_DMSO_200M_050219_1,4256 HBL1_DMSO_200M_050219_1,4256,TNHQCTCQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4259 19.27 563.0 47572.0 25 0 5210.8 -1 0 49 585.5121983268015 2338.0196874408057 4 585.5129272341728 MULTI CID FTMS 0 0 0 4258 58488.99609375 0.2611922466570836 -22 0.1514263153076172 1 3 S[VP]{I|L}AQ 6 -1 21.159 0.0 0.0 0.90498 0.0 0.0 1049.4542594311392 690.2517794244749 1739.7060388556142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 S[VP]{I|L}AQ 0.90498 - 97 + 1 2.246 31428.1 1.0 342 3915 4258 HBL1_DMSO_200M_050219_1,4259 HBL1_DMSO_200M_050219_1,4259, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4260 19.273 119.0 1086200.0 25 0 210950.0 -1 0 90 314.1996188968114 313.1923424302114 1 314.1995422244072 MULTI CID FTMS 0 0 0 4258 493226.3125 0.8249136083100762 -1 0.0039310455322265 2 3 P 1 -1 10.0 0.0 0.0 3.1929 0.0 0.0 198.1285053103856 0.0 198.1285053103856 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 P 3.1929 - 8 + 1 2.246 106601.6 1.0 343 3915 4258 HBL1_DMSO_200M_050219_1,4260 HBL1_DMSO_200M_050219_1,4260, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4263 19.293 800.0 37916.0 25 0 3963.0 31807 RSTSCTQEVSH 11 51 617.7774718116913 0 617.7772094607353 PEAK CID FTMS 0 0 0 4262 25444.56640625 0.3377176914613194 -1 0.0038890838623046 1 Unmodified _RSTSCTQEVSH_ nc|ENSG00000125449|Q9H6L4-2|ARMC7 4.189502756095605 0.4761840153648598 3 A{[DA]|[EG]}SHW 6 9 13.505 0.0 0.0 1.0948 0.0 0.0 341.1693268723822 222.0885714166625 563.2578982890448 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 A{[DA]|[EG]}SHW 1.0948 - 57 + 1 2.246 33166.7 0.4699999988079071 344 3917 4262 HBL1_DMSO_200M_050219_1,4263 HBL1_DMSO_200M_050219_1,4263,RSTSCTQEVSH False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 4265 19.307 688.0 43112.0 25 0 5528.5 -1 0 61 642.9565794397433 1925.8479089194293 3 642.9566528201103 MULTI CID FTMS 0 0 0 4264 77558.421875 0.4869165681877462 5 -0.0473651885986328 1 3 Q 1 -1 16.99 0.0 0.0 0.88219 0.0 0.0 1779.7789066995065 0.0 1779.7789066995065 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.88219 - 75 + 1 2.246 32048.2 1.0 345 3918 4264 HBL1_DMSO_200M_050219_1,4265 HBL1_DMSO_200M_050219_1,4265, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4268 19.319 289.0 97258.0 25 0 6345.3 + -1 WRRWMMCRDLH 11 61 555.2491758937556 1662.7256982814663 3 555.5831786990166 MULTI CID FTMS 0 0 0 4267 116142.78125 0.6360231774077262 -5 0.0528640747070312 1 Acetyl (Protein N-term),2 Oxidation (M) _(Acetyl (Protein N-term))WRRWM(Oxidation (M))M(Oxidation (M))CRDLH_ REV__ENST00000393104.6_1_10:112641263-112642826:+|nuORF 0.0948413911109767 0.8747004676205551 3 Q[YG]HEH 6 -1 27.14 0.0 0.0 1.6323 0.0 0.0 893.4099767011916 0.0 893.4099767011916 0.0 20.15031251017077 0.0 0.0 0 0.0 0.0 0.0 0.5 Q[YG]HEH 1.6323 - 192 + 1 2.246 31884.7 1.0 346 3920 4267 HBL1_DMSO_200M_050219_1,4268 HBL1_DMSO_200M_050219_1,4268,WRRWMMCRDLH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4269 19.333 800.0 107920.0 25 0 12996.0 + -1 CFRFCFFHWEK 11 98 416.6881003490178 1662.7232955296713 4 416.6882202029228 MULTI CID FTMS 0 0 0 4267 80483.25 0.9307580254607708 -2 0.0180816650390625 2 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))FRFC(Carbamidomethyl (C))FFHWEK_ REV__ENST00000268607.9_1_16:87437433-87437484:+|nuORF 0.0948413911109767 0.8747004676205551 3 QGHYHE 6 -1 35.101 0.0 0.0 2.111 0.0 0.0 893.4072847219873 0.0 893.4072847219873 0.0 18.25431355831408 0.0 0.0 0 0.0 0.0 0.6022338482433752 0.5 QGHYHE 2.111 - 785 + 1 2.246 76642.9 0.4799999892711639 347 3920 4267 HBL1_DMSO_200M_050219_1,4269 HBL1_DMSO_200M_050219_1,4269,CFRFCFFHWEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4277 19.372 800.0 92530.0 25 0 43821.0 -1 0 52 813.3644883929203 2437.0716357789606 3 813.6974365115166 MULTI CID FTMS 0 0 0 4276 47332.25390625 0.4871051409711907 -1 0.0039634704589843 1 3 DA 2 -1 10.969 0.0 0.0 0.45009 0.0 0.0 1624.6209313419793 623.3620699518186 2247.9830012937978 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DA 0.45009 - 15 + 1 2.251 60417.0 0.5 348 3927 4276 HBL1_DMSO_200M_050219_1,4277 HBL1_DMSO_200M_050219_1,4277, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4279 19.377 9.3 6412700.0 25 0 1975200.0 + 4104 DAPAGRKV 8 58 407.2325269460866 812.4505009589733 2 407.2323486208916 MULTI CID FTMS 0 0 0 4278 6791282.5 0.2934165398819487 -18 0.1599388122558593 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 26.88365393820708 0.4786498634179528 3 DAPA 4 4 61.23 0.0 0.0 7.5365 0.0 0.0 0.0 455.2731006954948 455.2731006954948 49.24024714504206 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.0 0.0 + DAPA 7.5365 + + 29 + 1 2.251 52414.3 1.0 349 3928 4278 HBL1_DMSO_200M_050219_1,4279 HBL1_DMSO_200M_050219_1,4279,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4284 19.405 800.0 137140.0 25 0 50743.0 5358 DLIQFYNNIY 10 70 434.8819231782773 0 434.8817626833916 PEAK CID FTMS 0 0 0 4283 183493.0625 0.6795928446075128 47 -0.5319061279296875 1 Unmodified _DLIQFYNNIY_ ENSG00000103479|ENST00000262133|RBL2 1.9063754702782607 0.3961065659209837 3 R 1 10 1.42 0.0 0.0 0.16364 0.0 0.0 600.6019678391733 108.02083002261952 708.6227978617928 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.16364 - 3 + 1 2.251 89740.7 0.8500000238418579 350 3932 4283 HBL1_DMSO_200M_050219_1,4284 HBL1_DMSO_200M_050219_1,4284,DLIQFYNNIY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4285 19.418 800.0 90917.0 25 0 51726.0 -1 ISHRWRWPMAC 11 58 505.9070228382176 0 505.9070312380791 PEAK CID FTMS 0 0 0 4283 119079.2265625 0.6624478634624223 13 -0.2301197052001953 2 Carbamidomethyl (C),Oxidation (M) _ISHRWRWPM(Oxidation (M))AC(Carbamidomethyl (C))_ ENST00000433071.2_1_21:32931573-32932426:+|nuORF 0.4545168274142398 0.4761840153648598 3 E 1 -1 3.0989 0.0 0.0 0.30689 0.0 0.0 680.6413639363979 197.0933016412719 877.7346655776697 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.30689 - 7 + 1 2.251 61989.6 0.6399999856948853 351 3932 4283 HBL1_DMSO_200M_050219_1,4285 HBL1_DMSO_200M_050219_1,4285,ISHRWRWPMAC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4289 19.442 800.0 40461.0 25 0 3408.6 -1 0 74 572.9315310928598 1715.7727638787792 3 573.2662231326103 MULTI CID FTMS 0 0 0 4288 48814.3515625 0.1394471522927429 -12 0.0857486724853515 1 3 Q 1 -1 19.292 0.0 0.0 1.1244 0.0 0.0 1569.7033344127622 0.0 1569.7033344127622 0.0 7.509010310672064 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 Q 1.1244 - 145 + 1 2.251 36354.6 0.5699999928474426 352 3935 4288 HBL1_DMSO_200M_050219_1,4289 HBL1_DMSO_200M_050219_1,4289, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4293 19.466 800.0 25621.0 25 0 1699.0 -1 0 35 754.7408222790348 3768.6677290621737 5 754.9434081912041 MULTI CID FTMS 0 0 0 4292 19445.748046875 0.2455251116058768 -1 0.0038928985595703 1 3 G 1 -1 2.2185 0.0 0.0 0.058867 0.0 0.0 3014.849138829555 693.7699068658811 3708.619045695437 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.058867 - 2 + 1 2.251 23142.8 0.5099999904632568 353 3938 4292 HBL1_DMSO_200M_050219_1,4293 HBL1_DMSO_200M_050219_1,4293, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4294 19.48 800.0 168970.0 25 0 30029.0 -1 0 140 349.7189198606537 697.4232867881075 2 349.7183410525322 MULTI CID FTMS 0 0 0 4292 91237.75 0.6731807959079869 -9 0.073099136352539 2 3 APA 3 -1 53.188 0.0 0.0 7.6263 0.0 0.0 0.0 455.274267090384 455.274267090384 26.800398258514893 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 APA 7.6263 - 51 + 1 2.251 109039.3 0.5600000023841858 354 3938 4292 HBL1_DMSO_200M_050219_1,4294 HBL1_DMSO_200M_050219_1,4294, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4297 19.494 428.0 50574.0 25 0 7466.4 -1 0 47 686.9146430669294 3429.536833001647 5 687.3150512576103 MULTI CID FTMS 0 0 0 4296 61320.09375 0.6156437928310852 4 -0.1186351776123046 1 3 N 1 -1 11.237 0.0 0.0 0.32766 0.0 0.0 1182.520472902855 2129.947026282008 3312.467499184864 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 N 0.32766 - 20 + 1 2.251 25660.5 1.0 355 3940 4296 HBL1_DMSO_200M_050219_1,4297 HBL1_DMSO_200M_050219_1,4297, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4298 19.508 800.0 45974.0 25 0 2667.9 -1 0 40 804.1544260790041 4015.73574806202 5 804.5563842654228 MULTI CID FTMS 0 0 0 4296 133586.78125 1.0 0 0.0 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.251 37097.2 0.6200000047683716 356 3940 4296 HBL1_DMSO_200M_050219_1,4298 HBL1_DMSO_200M_050219_1,4298, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4299 19.522 800.0 55884.0 25 0 8182.8 -1 0 72 600.2700217158095 1797.7882357476285 3 600.6055786013603 MULTI CID FTMS 0 0 0 4296 79966.5625 1.0 0 0.0 3 3 Q[SG]HEH 6 -1 11.419 0.0 0.0 0.63517 0.0 0.0 1104.5051679759472 0.0 1104.5051679759472 0.0 7.439644787305399 0.0 0.0 0 0.0 0.0 0.0 0.5 Q[SG]HEH 0.63517 - 91 + 1 2.251 42310.7 0.5299999713897705 357 3940 4296 HBL1_DMSO_200M_050219_1,4299 HBL1_DMSO_200M_050219_1,4299, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4301 19.539 800.0 54861.0 25 0 4198.9 -1 0 69 585.5121983268015 2338.0196874408057 4 585.7623779177666 MULTI CID FTMS 0 0 0 4300 88032.6640625 0.4044217285686127 1 -0.0307960510253906 1 3 A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{I|L}AQ 7 -1 21.458 0.0 0.0 0.9178 0.0 0.0 838.3604940844085 690.2478121393186 1528.6083062237271 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{I|L}AQ 0.9178 - 679 + 1 2.251 41173.6 0.699999988079071 358 3941 4300 HBL1_DMSO_200M_050219_1,4301 HBL1_DMSO_200M_050219_1,4301, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4302 19.552 800.0 15240.0 25 0 1073.7 -1 0 37 789.6975503368117 2366.070821610635 3 790.0324584841728 MULTI CID FTMS 0 0 0 4300 69635.9609375 1.0 0 0.0 2 3 W 1 -1 4.6041 0.0 0.0 0.19459 0.0 0.0 1976.9185216612195 200.0569857233032 2176.975507384522 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.19459 - 13 + 1 2.251 20024.5 0.3499999940395355 359 3941 4300 HBL1_DMSO_200M_050219_1,4302 HBL1_DMSO_200M_050219_1,4302, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4304 19.557 32.0 2837700.0 25 0 773470.0 -1 0 85 314.2004471468097 626.3863413604195 2 314.1999694705009 MULTI CID FTMS 0 0 0 4303 2013653.875 0.8806915426067855 -5 0.1060981750488281 1 3 PA{[NV]|[RG]}{[QV]|[N{I|L}]|[RA]|[KV]} 6 -1 + 50.533 0.0 0.0 8.0673 8.0673 97.435 0.0 0.0 0.0 29.56363103061157 3.5379466712471697 3.5379466712471697 50.53273116069214 0 0.3807196863200844 2.0 0.0 0.7059771852360797 PA{[NV]|[RG]}{[QV]|[N{I|L}]|[RA]|[KV]} 8.0673 - 40 + 1 2.251 79532.8 1.0 360 3942 4303 HBL1_DMSO_200M_050219_1,4304 HBL1_DMSO_200M_050219_1,4304, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4305 19.571 800.0 61438.0 25 0 5789.0 + 31668 RRIYFRMRREK 11 41 805.9621035305523 0 805.7623168826103 PEAK CID FTMS 0 0 0 4303 61001.39453125 0.6225311995968947 2 -0.05023193359375 2 Unmodified _RRIYFRMRREK_ REV__ENSG00000141837|ENST00000360228|CACNA1A;REV__nc|ENSG00000141837|O00555-2|CACNA1A;REV__nc|ENSG00000141837|O00555-3|CACNA1A;REV__nc|ENSG00000141837|O00555-4|CACNA1A;REV__nc|ENSG00000141837|O00555-5|CACNA1A;REV__nc|ENSG00000141837|O00555-6|CACNA1A 0.0 0.4761840153648598 3 {M(Oxidation (M))|F} 1 -1 7.2185 0.0 0.0 0.44838 0.0 0.0 804.7583612585671 655.0748385065061 1459.8331997650732 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.44838 + + 1 + 1 2.251 41749.2 0.3899999856948852 361 3942 4303 HBL1_DMSO_200M_050219_1,4305 HBL1_DMSO_200M_050219_1,4305,RRIYFRMRREK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4306 19.585 800.0 29479.0 25 0 2085.8 -1 0 63 601.9421607664461 1802.8046528995385 3 601.9423095583916 MULTI CID FTMS 0 0 0 4303 80733.1796875 0.4044425228726317 -9 0.1338005065917968 3 3 Q 1 -1 13.234 0.0 0.0 0.73408 0.0 0.0 1656.735482832935 0.0 1656.735482832935 0.0 7.036086140689317 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 Q 0.73408 - 21 + 1 2.251 26736.8 0.4000000059604645 362 3942 4303 HBL1_DMSO_200M_050219_1,4306 HBL1_DMSO_200M_050219_1,4306, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4307 19.599 800.0 52091.0 25 0 5835.0 -1 0 76 525.9888074038232 2099.9261237488927 4 526.4893676638603 MULTI CID FTMS 0 0 0 4303 63889.16015625 0.4255985604883723 -4 0.1022052764892578 4 3 Q 1 -1 13.099 0.0 0.0 0.62378 0.0 0.0 1953.8572130817035 0.0 1953.8572130817035 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.62378 - 89 + 1 2.251 39536.0 0.3600000143051147 363 3942 4303 HBL1_DMSO_200M_050219_1,4307 HBL1_DMSO_200M_050219_1,4307, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4310 19.619 800.0 52531.0 25 0 3157.7 24317 MDYLNPNVWG 10 86 604.774398986078 1207.534245038956 2 604.7736083865166 MULTI CID FTMS 0 0 0 4309 79918.2421875 0.9730917901279488 1 -0.0161113739013671 1 Unmodified _MDYLNPNVWG_ ENSG00000156042|ENST00000355577|CFAP70;nc|ENSG00000156042|Q5T0N1-2|CFAP70;nc|ENSG00000156042|Q5T0N1-6|CFAP70;nc|ENSG00000156042|Q5T0N1-7|CFAP70;nc|ENSG00000156042|Q5T0N1|CFAP70 8.745405648335112 0.6861838735306406 3 Q 1 10 10.181 0.0 0.0 0.84313 0.0 0.0 1061.4647850553606 0.0 1061.4647850553606 0.0 0.0037731936679108 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.84313 - 82 + 1 2.245 34375.8 0.5600000023841858 364 3944 4309 HBL1_DMSO_200M_050219_1,4310 HBL1_DMSO_200M_050219_1,4310,MDYLNPNVWG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4314 19.631 2.3 21110000.0 25 0 6057300.0 + 4105 DAPAGRKV 8 58 407.2325269460866 812.4505009589733 2 407.2325012087822 MULTI CID FTMS 0 0 0 4313 22635568.0 0.9779669805846778 1 -0.032175064086914 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 16.942295170755138 0.6606234159769251 3 DAPA 4 4 56.186 0.0 0.0 6.9156 0.0 0.0 0.0 455.27341638736567 455.27341638736567 52.69077524932108 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + DAPA 6.9156 + + 17 + 1 2.245 43497.6 1.0 365 3947 4313 HBL1_DMSO_200M_050219_1,4314 HBL1_DMSO_200M_050219_1,4314,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4315 19.645 800.0 45338.0 25 0 4818.3 -1 0 59 512.5200114003574 2046.0509397350293 4 512.5201293826103 MULTI CID FTMS 0 0 0 4313 45551.4453125 0.4336602788892151 -9 0.1762962341308593 2 3 KE 2 -1 16.198 0.0 0.0 0.79167 0.0 0.0 1770.9025155180354 0.0 1770.9025155180354 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 KE 0.79167 - 64 + 1 2.245 42532.1 0.6499999761581421 366 3947 4313 HBL1_DMSO_200M_050219_1,4315 HBL1_DMSO_200M_050219_1,4315, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4316 19.659 800.0 40491.0 25 0 2177.7 -1 0 62 700.9822919038364 2099.925046311709 3 701.3168823122978 MULTI CID FTMS 0 0 0 4313 80344.1640625 0.982708283823113 3 -0.0757369995117187 3 3 HPT 3 -1 31.198 0.0 0.0 1.4857 0.0 0.0 0.0 1761.7067354791627 1761.7067354791627 27.703037561203843 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 HPT 1.4857 - 21 + 1 2.245 32092.5 0.6000000238418579 367 3947 4313 HBL1_DMSO_200M_050219_1,4316 HBL1_DMSO_200M_050219_1,4316, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4319 19.675 564.0 184740.0 25 0 12284.0 + 31926 RVAGIHKKV 9 133 336.553965292709 0 336.5536376833916 PEAK CID FTMS 0 0 0 4318 115101.4296875 0.9002580950607163 5 -0.0714111328125 1 Unmodified _RVAGIHKKV_ ENSG00000167526|ENST00000311528|RPL13;ENST00000399461.8_1_16:89627605-89629447:+|nuORF;ENST00000440687.1_1_20:44728270-44728609:+|nuORF;ENST00000565571.5_1_16:89627367-89628201:+|nuORF 17.44264345198275 0.2268971914127055 3 HG 2 8 7.9588 0.0 0.0 1.1859 0.0 0.0 405.93897198991175 68.0513170831664 473.99028907307815 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HG 1.1859 - 14 + 1 2.245 86046.5 1.0 368 3949 4318 HBL1_DMSO_200M_050219_1,4319 HBL1_DMSO_200M_050219_1,4319,RVAGIHKKV False True RVAGIHKKV 19.674502 336.553637683392 502984.4375 4318.0 ENSG00000167526|ENST00000311528|RPL13;;ENST00000565571.5_1_16:89627367-89628201:+|nuORF;;ENST00000440687.1_1_20:44728270-44728609:+|nuORF;;ENST00000399461.8_1_16:89627605-89629447:+|nuORF 5.39719279607137 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4320 19.688 800.0 65559.0 25 0 1699.6 -1 0 102 808.704606832366 2423.091991097298 3 809.0402709841728 MULTI CID FTMS 0 0 0 4318 109403.2421875 0.155319901689249 -15 0.2400741577148437 2 3 H{M(Oxidation (M))|F}AQ[WP][HQ] 8 -1 13.522 0.0 0.0 0.55806 0.0 0.0 1373.6112345803383 0.0 1373.6112345803383 0.0 1.3161404875364084 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 H{M(Oxidation (M))|F}AQ[WP][HQ] 0.55806 - 1772 1 2.245 45886.6 0.5899999737739563 369 3949 4318 HBL1_DMSO_200M_050219_1,4320 HBL1_DMSO_200M_050219_1,4320, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4321 19.702 800.0 25187.0 25 0 2297.6 -1 0 47 760.6866528398166 2279.038129119649 3 761.0206786990166 MULTI CID FTMS 0 0 0 4318 78785.28125 0.695612766310557 -7 0.1099834442138671 3 3 {[SA]|[TG]}GS 4 -1 16.198 0.0 0.0 0.71073 0.0 0.0 0.0 1973.8925321468569 1973.8925321468569 9.208187539523747 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[SA]|[TG]}GS 0.71073 - 28 1 2.245 24783.8 0.5199999809265137 370 3949 4318 HBL1_DMSO_200M_050219_1,4321 HBL1_DMSO_200M_050219_1,4321, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4323 19.708 192.0 81673.0 25 0 8617.5 -1 0 38 572.9315310928598 1715.7727638787792 3 572.9315673708916 MULTI CID FTMS 0 0 0 4322 203487.203125 0.4909965609982455 4 -0.0315666198730468 1 3 Q 1 -1 17.787 0.0 0.0 1.0367 0.0 0.0 1569.7034259654963 0.0 1569.7034259654963 0.0 7.302046884880937 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 Q 1.0367 - 21 + 1 2.245 23419.3 1.0 371 3950 4322 HBL1_DMSO_200M_050219_1,4323 HBL1_DMSO_200M_050219_1,4323, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4324 19.722 800.0 46903.0 25 0 2183.9 -1 0 77 837.7152622853699 2510.1239574563097 3 838.0499145388603 MULTI CID FTMS 0 0 0 4322 106495.484375 0.1790595057621984 -21 0.3251323699951172 2 3 HG[HN]HS 6 -1 15.406 0.0 0.0 0.61376 0.0 0.0 1293.599861852597 544.2267550104124 1837.826616863009 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 HG[HN]HS 0.61376 - 444 + 1 2.245 36708.6 0.4099999964237213 372 3950 4322 HBL1_DMSO_200M_050219_1,4324 HBL1_DMSO_200M_050219_1,4324, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4330 19.754 800.0 165470.0 25 0 31077.0 -1 0 130 349.7189198606537 697.4232867881075 2 349.7188293337822 MULTI CID FTMS 0 0 0 4329 66094.4453125 0.4876655912773568 8 -0.0630741119384765 1 3 APA 3 -1 54.253 0.0 0.0 7.779 0.0 0.0 0.0 455.2735443200364 455.2735443200364 27.425091941556392 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 APA 7.779 - 49 + 1 2.245 104999.7 0.6600000262260437 373 3955 4329 HBL1_DMSO_200M_050219_1,4330 HBL1_DMSO_200M_050219_1,4330, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4333 19.774 800.0 76039.0 25 0 2381.7 -1 0 102 525.2360814884566 2096.9152200874264 4 525.4860717654228 MULTI CID FTMS 0 0 0 4332 96919.2578125 0.7501524109470787 1 -0.0237598419189453 1 3 GPSRS 5 -1 41.287 0.0 0.0 1.9689 0.0 0.0 0.0 1609.6696986490947 1609.6696986490947 22.34636880228201 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 GPSRS 1.9689 - 812 + 1 2.242 53789.4 0.6200000047683716 374 3957 4332 HBL1_DMSO_200M_050219_1,4333 HBL1_DMSO_200M_050219_1,4333, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4334 19.781 428.0 168750.0 25 0 18333.0 + 25873 NLHEDIQK 8 113 332.8416437654628 995.5031018965884 3 332.8416625857353 MULTI CID FTMS 0 0 0 4332 131075.546875 0.4778382693267708 -37 0.4464302062988281 2 Unmodified _NLHEDIQK_ ENSG00000113615|ENST00000398844|SEC24A;nc|ENSG00000113615|O95486-2|SEC24A 18.1463463914782 0.6428359029697936 3 VA{M(Oxidation (M))|F}GEG 6 8 17.106 0.0 0.0 1.7183 0.0 0.0 364.1864563076812 68.05133997134999 432.2377962790312 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.2614393726401688 0.0 VA{M(Oxidation (M))|F}GEG 1.7183 - 163 + 1 2.242 61384.6 1.0 375 3957 4332 HBL1_DMSO_200M_050219_1,4334 HBL1_DMSO_200M_050219_1,4334,NLHEDIQK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4342 19.809 62.0 1536600.0 25 0 348070.0 -1 0 83 314.2004471468097 626.3863413604195 2 314.2000610232353 MULTI CID FTMS 0 0 0 4341 1003615.5 0.4389412171836535 17 -0.1290931701660156 1 3 PAV 3 -1 46.995 0.0 0.0 7.5025 0.0 0.0 0.0 356.2049654596313 356.2049654596313 27.53083433768431 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 PAV 7.5025 - 24 + 1 2.242 82685.8 1.0 376 3964 4341 HBL1_DMSO_200M_050219_1,4342 HBL1_DMSO_200M_050219_1,4342, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4343 19.823 800.0 75635.0 25 0 34003.0 -1 KDDCRCRQKWH 11 69 530.2451206189351 1587.713532457005 3 530.2463256716728 MULTI CID FTMS 0 0 0 4341 51861.87890625 0.3183564288060772 -61 0.6438865661621094 2 2 Carbamidomethyl (C) _KDDC(Carbamidomethyl (C))RC(Carbamidomethyl (C))RQKWH_ ENST00000534296.5_1_11:35222683-35223248:+|nuORF 0.5059551277355931 0.8727608062196215 3 H 1 -1 11.99 0.0 0.0 0.75516 0.0 0.0 1432.6440877321988 0.0 1432.6440877321988 0.0 3.8907562519182193 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.75516 + + 72 + 1 2.242 51583.3 0.5600000023841858 377 3964 4341 HBL1_DMSO_200M_050219_1,4343 HBL1_DMSO_200M_050219_1,4343,KDDCRCRQKWH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4344 19.837 800.0 46451.0 25 0 5437.8 + 41930 VQHVDAAEK 9 50 498.7588417822275 995.503130631255 2 498.7591430544853 MULTI CID FTMS 0 0 0 4341 64597.7109375 0.6447119628840842 -24 0.3206233978271484 3 Unmodified _VQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 27.128809495255545 0.1860100384555814 3 {[QV]|[N{I|L}]|[RA]|[KV]}HV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EK 8 2 + 44.601 0.0 0.0 4.4802 4.4802 78.499 0.0 0.0 0.0 5.783861622707818 39.99668131245279 5.783861622707818 5.118926768029048 0 1.75 0.0 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}HV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EK;{[QV]|[N{I|L}]|[RA]|[KV]}HE{[QV]|[N{I|L}]|[RA]|[KV]}EK;{[QV]|[N{I|L}]|[RA]|[KV]}HEE{[QV]|[N{I|L}]|[RA]|[KV]}K 4.4802;3.966;3.6393 -;-;- 102 1 2.242 41075.8 0.5400000214576721 378 3964 4341 HBL1_DMSO_200M_050219_1,4344 HBL1_DMSO_200M_050219_1,4344,VQHVDAAEK False True VQHVDAAEK 19.836728 498.759143054485 5411236.9375 4341.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 6.959108193715413 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4346 19.853 800.0 34170.0 25 0 2712.5 -1 0 73 601.9421607664461 1802.8046528995385 3 601.9422485232353 MULTI CID FTMS 0 0 0 4345 89530.6640625 0.4485145734140581 14 -0.0836830139160156 1 3 QE 2 -1 7.9588 0.0 0.0 0.44147 0.0 0.0 1136.5372711630132 406.1473482721313 1542.6846194351444 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QE 0.44147 - 60 + 1 2.242 29815.8 0.6100000143051147 379 3965 4345 HBL1_DMSO_200M_050219_1,4346 HBL1_DMSO_200M_050219_1,4346, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4355 19.885 9.5 5598200.0 25 0 1703900.0 + 4106 DAPAGRKV 8 53 407.2325269460866 812.4505009589733 2 407.2323486208916 MULTI CID FTMS 0 0 0 4354 6001388.0 0.2592892434454094 27 -0.1666336059570312 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 21.74664581756881 0.5868176546531598 3 DAPA 4 4 59.68 0.0 0.0 7.3457 0.0 0.0 0.0 455.2740817501751 455.2740817501751 55.07638152291939 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + DAPA 7.3457 + + 16 + 1 2.242 47917.9 1.0 380 3973 4354 HBL1_DMSO_200M_050219_1,4355 HBL1_DMSO_200M_050219_1,4355,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4361 19.906 194.0 520900.0 25 0 78882.0 -1 0 89 340.1980077127063 678.3814624922127 2 340.1977111697197 MULTI CID FTMS 0 0 0 4360 259188.421875 0.7040442760274965 -5 0.0201702117919921 1 3 APKPR 5 -1 38.817 0.0 0.0 5.722 0.0 0.0 111.03200337534754 0.0 111.03200337534754 0.0 34.83771747200825 0.0 0.0 0 0.5752574989159953 0.0 0.0 0.2887254899964357 APKPR 5.722 - 27 + 1 2.242 84811.0 1.0 381 3978 4360 HBL1_DMSO_200M_050219_1,4361 HBL1_DMSO_200M_050219_1,4361, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4362 19.92 800.0 40185.0 25 0 2730.2 -1 FRCQQLKSCEE 11 63 495.5591664687505 1483.6556700064516 3 495.5582763552666 MULTI CID FTMS 0 0 0 4360 76959.3984375 1.0 0 0.0 2 2 Carbamidomethyl (C) _FRC(Carbamidomethyl (C))QQLKSC(Carbamidomethyl (C))EE_ ENSG00000104327|ENST00000265431|CALB1;nc|ENSG00000104327|P05937-2|CALB1 1.3296431237094175 0.8688745925763601 3 VEQ[SG]YH 7 -1 37.197 0.0 0.0 2.5071 0.0 0.0 665.2892282113329 0.0 665.2892282113329 0.0 26.71281968974497 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.5 VEQ[SG]YH 2.5071 - 263 + 1 2.242 36492.6 0.5199999809265137 382 3978 4360 HBL1_DMSO_200M_050219_1,4362 HBL1_DMSO_200M_050219_1,4362,FRCQQLKSCEE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4365 19.934 388.0 135320.0 25 0 3920.6 -1 0 97 808.704606832366 2423.091991097298 3 809.0394164919853 MULTI CID FTMS 0 0 0 4364 369612.90625 0.5247398442126506 16 -0.094675064086914 1 3 A[WP] 3 -1 8.072 0.0 0.0 0.33313 0.0 0.0 2050.9165283060856 0.0 2050.9165283060856 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 A[WP] 0.33313 - 442 + 1 2.242 45734.0 1.0 383 3980 4364 HBL1_DMSO_200M_050219_1,4365 HBL1_DMSO_200M_050219_1,4365, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4368 19.954 800.0 32816.0 25 0 2121.1 + -1 CSCCTRRCCCI 11 48 512.5200781695911 0 512.5207397341728 PEAK CID FTMS 0 0 0 4367 41967.9765625 0.6392414116119414 1 -0.0161895751953125 1 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))SC(Carbamidomethyl (C))CTRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))I_ REV__nc|ENSG00000284667|A0A286YF46|SCYGR5 0.0948413911109767 0.4761840153648598 3 S 1 -1 7.3464 0.0 0.0 0.7181 0.0 0.0 565.8112612202385 367.1506845625717 932.9619457828104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 S 0.7181 + + 7 + 1 2.242 30786.1 0.449999988079071 384 3982 4367 HBL1_DMSO_200M_050219_1,4368 HBL1_DMSO_200M_050219_1,4368,CSCCTRRCCCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4371 19.963 173.0 82785.0 25 0 5955.2 -1 0 41 837.7152622853699 2510.1239574563097 3 838.0501586794853 MULTI CID FTMS 0 0 0 4370 347558.0625 0.5843775936618654 13 -0.0652275085449218 1 3 A[WP] 3 -1 10.458 0.0 0.0 0.41662 0.0 0.0 2137.94910501666 0.0 2137.94910501666 0.0 7.358631114164781 0.0 0.0 0 0.0 0.0 0.0 0.0 A[WP] 0.41662 - 19 + 1 2.242 21810.1 1.0 385 3984 4370 HBL1_DMSO_200M_050219_1,4371 HBL1_DMSO_200M_050219_1,4371, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4382 20.015 800.0 22719.0 25 0 2259.2 -1 0 54 608.5143280574549 2430.0282063634195 4 608.7651244997978 MULTI CID FTMS 0 0 0 4381 58668.95703125 0.6118786047431016 -18 0.1060848236083984 1 3 S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3 -1 4.1812 0.0 0.0 0.17206 0.0 0.0 2030.8885101737687 0.0 2030.8885101737687 0.0 1.7069622716897488 0.0 0.0 0 0.0 0.0 0.0 0.0 S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 0.17206 - 17 + 1 2.242 25758.0 0.5400000214576721 386 3994 4381 HBL1_DMSO_200M_050219_1,4382 HBL1_DMSO_200M_050219_1,4382, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4387 20.043 800.0 23301.0 25 0 2804.9 -1 0 45 696.3174679043316 2085.9305743131945 3 696.3181640505791 MULTI CID FTMS 0 0 0 4386 84682.171875 0.4565097415368971 -29 0.1623573303222656 1 3 V 1 -1 0.088644 0.0 0.0 0.0042496 0.0 0.0 1464.6465299790132 519.1942843072874 1983.8408142863004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.0042496 - 12 + 1 2.245 22831.5 0.4900000095367431 387 3998 4386 HBL1_DMSO_200M_050219_1,4387 HBL1_DMSO_200M_050219_1,4387, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4392 20.061 176.0 244010.0 25 0 35736.0 + 41931 VQHVDAAEK 9 81 332.8416437654628 995.5031018965884 3 332.8415405154228 MULTI CID FTMS 0 0 0 4391 175321.515625 0.6391377461265801 8 -0.0716457366943359 1 Unmodified _VQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 22.774965066869 0.2414061210083823 3 VDAAEK 6 3 34.826 0.0 0.0 3.4983 0.0 0.0 364.185990663283 0.0 364.185990663283 0.0 23.8566032266867 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.3054621874040891 + VDAAEK 3.4983 + + 164 + 1 2.245 38597.1 1.0 388 4002 4391 HBL1_DMSO_200M_050219_1,4392 HBL1_DMSO_200M_050219_1,4392,VQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4393 20.074 800.0 103330.0 25 0 5556.8 + 12163 GQNDIHHKV 9 133 349.84907750719736 1046.525403121792 3 349.8488952517509 MULTI CID FTMS 0 0 0 4391 94959.453125 0.3564132635778715 -31 0.1823387145996093 2 Unmodified _GQNDIHHKV_ ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2 14.838274106304384 0.4350285940865338 3 {I|L}HHKV 5 4 12.652 0.0 0.0 1.2089 0.0 0.0 414.15130043743176 0.0 414.15130043743176 0.0 1.4237101333623323 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}HHKV 1.2089 + + 110 + 1 2.245 71489.5 0.5199999809265137 389 4002 4391 HBL1_DMSO_200M_050219_1,4393 HBL1_DMSO_200M_050219_1,4393,GQNDIHHKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4395 20.091 800.0 70151.0 25 0 6742.9 + -1 LMWPFWCCFLL 11 95 530.2451206189351 1587.713532457005 3 530.2456542849541 MULTI CID FTMS 0 0 0 4394 129523.421875 0.7950852322455801 -22 0.1409130096435547 1 2 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))WPFWC(Carbamidomethyl (C))C(Carbamidomethyl (C))FLL_ REV__ENSG00000105270|ENST00000360535|CLIP3 1.4551175022131473 0.8682825962816412 3 QGSH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6 -1 24.957 0.0 0.0 1.5719 0.0 0.0 903.4308308962616 0.0 903.4308308962616 0.0 15.225468765256174 0.0 0.0 0 0.0 0.0 0.8494850021680094 1.0114393726401687 QGSH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 1.5719 - 480 + 1 2.245 47319.2 0.4300000071525574 390 4003 4394 HBL1_DMSO_200M_050219_1,4395 HBL1_DMSO_200M_050219_1,4395,LMWPFWCCFLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4399 20.115 800.0 24592.0 25 0 2182.0 -1 0 46 522.4902137178843 2085.931749005137 4 522.7408935427666 MULTI CID FTMS 0 0 0 4398 27826.7109375 0.284383600755595 -18 0.1232032775878906 1 3 Q 1 -1 1.5938 0.0 0.0 0.076407 0.0 0.0 1493.336486409237 461.5016268365844 1954.8381132458208 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.076407 - 4 + 1 2.245 27717.1 0.5 391 4006 4398 HBL1_DMSO_200M_050219_1,4399 HBL1_DMSO_200M_050219_1,4399, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4421 20.203 424.0 341170.0 25 0 74459.0 -1 0 116 340.1980077127063 678.3814624922127 2 340.1977111697197 MULTI CID FTMS 0 0 0 4420 143293.921875 0.3892352318664891 44 -0.2539825439453125 1 3 PKPR 4 -1 25.764 0.0 0.0 3.7979 0.0 0.0 182.0687011170158 0.0 182.0687011170158 0.0 15.354779438430397 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.2614393726401688 PKPR 3.7979 - 36 + 1 2.249 118059.7 1.0 392 4027 4420 HBL1_DMSO_200M_050219_1,4421 HBL1_DMSO_200M_050219_1,4421, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4426 20.219 49.0 938320.0 25 0 259430.0 + 7442 EGPAGVRK 8 56 407.2325269460866 812.4505009589733 2 407.2323181033134 MULTI CID FTMS 0 0 0 4425 907692.5 0.0392167447940496 85 -0.4598007202148437 1 Unmodified _EGPAGVRK_ ENST00000523135.1_1_5:179680521-179691830:-|nuORF 12.531546534597751 0.7257836412119636 3 {[DA]|[EG]}PA 4 4 40.445 0.0 0.0 4.9782 0.0 0.0 0.0 455.2745455377563 455.2745455377563 33.42182362615581 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[DA]|[EG]}PA 4.9782 + + 14 + 1 2.249 41888.1 1.0 393 4031 4425 HBL1_DMSO_200M_050219_1,4426 HBL1_DMSO_200M_050219_1,4426,EGPAGVRK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4440 20.283 800.0 120410.0 25 0 19254.0 36730 TDRIMEEFFRQ 11 85 368.6803073762396 1470.6921236385583 4 368.6799804568291 MULTI CID FTMS 0 0 0 4439 58700.46484375 0.5253120064052657 -7 0.0275592803955078 1 Unmodified _TDRIMEEFFRQ_ ENSG00000113448|ENST00000340635|PDE4D;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D 1.214830529360525 0.8694162858786273 3 {M(Oxidation (M))|F}QR 3 9 18.901 0.0 0.0 1.2852 0.0 0.0 1021.4539922134094 0.0 1021.4539922134094 0.0 6.426675035687314 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 {M(Oxidation (M))|F}QR 1.2852 - 88 + 1 2.249 82451.5 0.4699999988079071 394 4044 4439 HBL1_DMSO_200M_050219_1,4440 HBL1_DMSO_200M_050219_1,4440,TDRIMEEFFRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4442 20.299 800.0 28532.0 25 0 3171.8 -1 0 54 696.3174679043316 2085.9305743131945 3 696.6526367068291 MULTI CID FTMS 0 0 0 4441 35535.7109375 0.1706428307907567 23 -0.1526298522949218 1 3 P 1 -1 0.48455 0.0 0.0 0.023229 0.0 0.0 1396.6214445297944 589.2379244440061 1985.8593689738004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.023229 - 8 + 1 2.249 25000.8 0.3700000047683716 395 4045 4441 HBL1_DMSO_200M_050219_1,4442 HBL1_DMSO_200M_050219_1,4442, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4447 20.327 800.0 142010.0 25 0 5838.9 + 12164 GQNDIHHKV 9 164 349.84907750719736 1046.525403121792 3 349.8489868044853 MULTI CID FTMS 0 0 0 4446 160118.359375 0.6009755231894216 16 -0.1128921508789062 1 Unmodified _GQNDIHHKV_ ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2 27.628801355627647 0.1796483985696185 3 {[QG]|[NA]}ND{I|L}HHKV 9 0 + 48.24 0.0 0.0 4.6095 4.6095 76.495 0.0 0.0 0.0 5.642492736872597 3.162699622207178 3.162699622207178 3.162699622207178 0 0.4247425010840047 0.0 0.0 0.5610312860818771 + + {[QG]|[NA]}ND{I|L}HHKV;{[QG]|[NA]}ND{I|L}HHVK;{[QG]|[NA]}ND{I|L}HVHK;{[QG]|[NA]}GGD{I|L}HHKV;{[QG]|[NA]}GGD{I|L}HHVK;{[QG]|[NA]}ND{I|L}VHHK;{[QG]|[NA]}GGD{I|L}HVHK;{[QG]|[NA]}ND{I|L}V[R{M(Oxidation (M))|F}]V;{[QG]|[NA]}NDV{I|L}HHK;{[QG]|[NA]}NDV[C(Carbamidomethyl (C))K]KV 4.6095;4.3073;3.923;3.7296;3.4274;3.1794;3.0431;2.6455;2.6042;2.5301 +;-;-;-;-;-;-;-;-;- + 541 + 1 2.249 93642.3 0.7599999904632568 396 4049 4446 HBL1_DMSO_200M_050219_1,4447 HBL1_DMSO_200M_050219_1,4447,GQNDIHHKV False True GQNDIHHKV 20.327044 349.848986804485 3585930.25 4446.0 ENSG00000138757|ENST00000359707|G3BP2;;nc|ENSG00000138757|Q9UN86-2|G3BP2 6.528130849202474 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4451 20.352 800.0 24639.0 25 0 1843.9 -1 LGCEPQLAGD 10 48 530.2444787703423 0 530.2454101443291 PEAK CID FTMS 0 0 0 -1 0 1 Carbamidomethyl (C) _LGC(Carbamidomethyl (C))EPQLAGD_ ENSG00000095596|ENST00000224356|CYP26A1;nc|ENSG00000095596|O43174-2|CYP26A1 8.745405648335112 0.3843311602926832 3 Q 1 -1 6.9897 0.0 0.0 0.66036 0.0 0.0 374.193473066272 553.2004488580686 927.3939219243408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 Q 0.66036 + + 2 + 1 2.249 24223.4 0.4600000083446502 397 4052 4450 HBL1_DMSO_200M_050219_1,4451 HBL1_DMSO_200M_050219_1,4451,LGCEPQLAGD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4459 20.392 800.0 57257.0 25 0 15104.0 -1 0 35 1011.3556593623316 2020.696765791464 2 1011.356005847454 MULTI CID FTMS 0 0 0 4458 58565.0703125 0.2333094722414062 -31 0.1722927093505859 1 3 M 1 -1 6.9897 0.0 0.0 0.34591 0.0 0.0 556.1643694065009 1330.4911593072875 1886.6555287137885 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.34591 - 16 + 1 2.249 41328.4 0.4399999976158142 398 4059 4458 HBL1_DMSO_200M_050219_1,4459 HBL1_DMSO_200M_050219_1,4459, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4465 20.424 800.0 121310.0 25 0 6421.6 34589 SPHEAVGT 8 149 399.1931109937309 796.3716690542618 2 399.1927673220634 MULTI CID FTMS 0 0 0 4464 89733.1015625 0.5829671000086487 -38 0.2183570861816406 1 Unmodified _SPHEAVGT_ ENST00000393473.6_1_2:99771434-99772854:+|nuORF 18.13498045792455 0.6430038125133779 3 VDAAEK 6 7 51.508 0.0 0.0 6.4679 0.0 0.0 165.05625264976806 0.0 165.05625264976806 0.0 41.0235909396512 0.0 0.0 0 2.2302046884880937 0.0 0.8807196863200843 0.3054621874040891 VDAAEK 6.4679 - 200 + 1 2.249 78563.8 0.4799999892711639 399 4064 4464 HBL1_DMSO_200M_050219_1,4465 HBL1_DMSO_200M_050219_1,4465,SPHEAVGT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4478 20.472 160.0 453560.0 25 0 132690.0 7443 EGPAGVRK 8 60 407.2325269460866 812.4505009589733 2 407.2322875857353 MULTI CID FTMS 0 0 0 4477 481784.34375 0.020815434361981 130 -0.6996440887451172 1 Unmodified _EGPAGVRK_ ENST00000523135.1_1_5:179680521-179691830:-|nuORF 23.1484247019978 0.5573009939494978 3 {[DA]|[EG]}PA 4 4 44.253 0.0 0.0 5.4468 0.0 0.0 0.0 455.2728513680112 455.2728513680112 38.76795939188455 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + {[DA]|[EG]}PA 5.4468 + + 19 + 1 2.255 61896.2 1.0 400 4076 4477 HBL1_DMSO_200M_050219_1,4478 HBL1_DMSO_200M_050219_1,4478,EGPAGVRK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4489 20.524 800.0 34700.0 25 0 3051.0 -1 0 44 871.8692080790343 1741.7238632248684 2 872.3721191287041 MULTI CID FTMS 0 0 0 4488 54109.1875 0.6556916046190537 1 -0.0162773132324218 1 3 EGQD 4 -1 19.38 0.0 0.0 1.1127 0.0 0.0 1294.548143455275 0.0 1294.548143455275 0.0 5.383643918355359 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.0 EGQD 1.1127 - 12 1 2.255 28029.7 0.4799999892711639 401 4086 4488 HBL1_DMSO_200M_050219_1,4489 HBL1_DMSO_200M_050219_1,4489, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4501 20.579 800.0 67833.0 25 0 16175.0 -1 0 29 1040.357830207308 2078.7011074814163 2 1040.359179675579 MULTI CID FTMS 0 0 0 4500 48168.23828125 0.5326963850633305 -1 0.0039539337158203 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.255 47488.3 0.4300000071525574 402 4097 4500 HBL1_DMSO_200M_050219_1,4501 HBL1_DMSO_200M_050219_1,4501, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4515 20.643 800.0 71572.0 25 0 16778.0 -1 0 35 1011.3556593623316 2020.696765791464 2 1011.357348620892 MULTI CID FTMS 0 0 0 4514 108845.84375 0.4336162532628746 20 -0.1285629272460937 1 3 R 1 -1 3.0989 0.0 0.0 0.15336 0.0 0.0 1498.4862688205633 363.0933428598104 1861.579611680373 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.15336 - 7 + 1 2.257 52660.8 0.4900000095367431 403 4110 4514 HBL1_DMSO_200M_050219_1,4515 HBL1_DMSO_200M_050219_1,4515, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4518 20.663 800.0 62684.0 25 0 4626.1 + 28455 PTEAKHQSE 9 106 513.746130281932 1025.477707630664 2 513.7465087771416 MULTI CID FTMS 0 0 0 4517 74374.8515625 0.6039857428627078 -28 0.1468639373779297 1 Unmodified _PTEAKHQSE_ REV__chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;REV__ENSG00000013810|ENST00000313288|TACC3;REV__ENST00000484651.5_1_4:1725148-1739714:+|nuORF 39.94969957227396 0.0757326808254658 3 E[PA]THKQSE 9 -1 + 66.014 0.0 0.0 6.4374 6.4374 92.097 0.0 0.0 0.0 55.92507050674128 9.690038872254249 9.690038872254249 20.78747260431681 0 2.3737125054200234 0.0 1.0387254899964358 0.3807196863200844 E[PA]THKQSE;{[ES]|[DT]|[{I|L}C]}[YR]KQSE;{[ES]|[DT]|[{I|L}C]}[YK]RQSE;{[ES]|[DT]|[{I|L}C]}[YR]K[AG]SE;{[ES]|[DT]|[{I|L}C]}[YK]R[AG]SE;{[MG]|[TS]}[YR][VG]QSE 6.4374;4.4103;4.0445;3.5071;3.1413;2.7022 -;-;-;-;-;- 182 + 1 2.257 44451.5 0.4799999892711639 404 4112 4517 HBL1_DMSO_200M_050219_1,4518 HBL1_DMSO_200M_050219_1,4518,PTEAKHQSE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4524 20.695 800.0 123080.0 25 0 12177.0 + 13524 HNGPEHWHK 9 140 381.1811994395072 1140.5217689187216 3 381.1803466677666 MULTI CID FTMS 0 0 0 4523 29599.970703125 0.1893325934523279 -35 0.1865291595458984 1 Unmodified _HNGPEHWHK_ ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF;ENST00000520996.5_1_8:86376310-86386651:+|nuORF 47.7319792270244 0.0453426645642791 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WN]|[YH]}HWKH 8 6 + 59.882 0.0 0.0 5.2504 5.2504 85.842 0.0 0.0 0.0 15.990990843429316 9.731975075880328 9.731975075880328 9.262137858390815 0 1.548455006504028 2.0 0.0 0.7742275032520141 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WN]|[YH]}HWKH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WN]|[YH]}H{[DA]|[EG]}KH;[HN]G[EP]HWKH;[WH]G[YQ]WKH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WN]|[YH]}H{[SA]|[TG]}[RH];[VP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[C(Carbamidomethyl (C))N]NKH;[HN]G[EP]H{[SA]|[TG]}[RH];{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}][C(Carbamidomethyl (C))N]NKH;[HN]{[YC]|[HE]}[PG]WKH;[WH]G[YQ]{[SA]|[TG]}[RH] 5.2504;4.4383;3.8484;3.4381;3.1667;1.8353;1.7694;1.4757;1.4595;1.3544 -;-;-;-;-;-;-;-;-;- 196 1 2.257 81901.1 0.5 405 4117 4523 HBL1_DMSO_200M_050219_1,4524 HBL1_DMSO_200M_050219_1,4524,HNGPEHWHK True True HNGPEHWHK 20.694708 381.180346667767 2372192.0 4523.0 ENSG00000104267|ENST00000285379|CA2;;ENST00000518231.1_1_8:86376310-86386082:+|nuORF;;ENST00000520996.5_1_8:86376310-86386651:+|nuORF 8.297567049662272 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4527 20.715 800.0 141430.0 25 0 9214.9 34590 SPHEAVGT 8 150 399.1931109937309 796.3716690542618 2 399.1931030154228 MULTI CID FTMS 0 0 0 4526 129048.9609375 0.8383895932145443 17 -0.0920925140380859 1 Unmodified _SPHEAVGT_ ENST00000393473.6_1_2:99771434-99772854:+|nuORF 24.67388899826682 0.525179942228231 3 VDAAEK 6 7 56.878 0.0 0.0 7.1422 0.0 0.0 165.0535060677368 0.0 165.0535060677368 0.0 42.39745272946543 0.0 0.0 0 2.4247425010840047 0.0 0.805462187404089 0.3252574989159953 VDAAEK 7.1422 - 220 + 1 2.257 91526.6 0.5199999809265137 406 4119 4526 HBL1_DMSO_200M_050219_1,4527 HBL1_DMSO_200M_050219_1,4527,SPHEAVGT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4530 20.724 102.0 553270.0 25 0 158930.0 7444 EGPAGVRK 8 58 407.2325850863368 812.4506172394736 2 407.2322875857353 MULTI CID FTMS 0 0 0 4529 528013.125 0.2541482931664869 13 -0.0639610290527343 1 Unmodified _EGPAGVRK_ ENST00000523135.1_1_5:179680521-179691830:-|nuORF 16.942295170755138 0.6606234159769251 3 {[DA]|[EG]}PA 4 4 44.253 0.0 0.0 5.4468 0.0 0.0 0.0 455.2739610565295 455.2739610565295 39.64841568716295 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + {[DA]|[EG]}PA 5.4468 + + 12 + 1 2.257 51588.9 1.0 407 4121 4529 HBL1_DMSO_200M_050219_1,4530 HBL1_DMSO_200M_050219_1,4530,EGPAGVRK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4542 20.779 800.0 31811.0 25 0 2291.0 + 31720 RRRRQTWRRFH 11 27 827.9725180590823 0 827.9720947146416 PEAK CID FTMS 0 0 0 4541 26549.201171875 0.3597885786769516 -6 0.0235977172851562 1 Unmodified _RRRRQTWRRFH_ REV__ENST00000233468.4_1_2:24290678-24291201:-|nuORF 0.0 0.4761840153648598 3 V 1 -1 5.4846 0.0 0.0 0.33161 0.0 0.0 1048.9647982257832 502.8801058404906 1551.8449040662738 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.33161 - 1 + 1 2.257 27578.2 0.4199999868869781 408 4132 4541 HBL1_DMSO_200M_050219_1,4542 HBL1_DMSO_200M_050219_1,4542,RRRRQTWRRFH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4547 20.802 476.0 152160.0 25 0 60789.0 26960 PECERRPSICL 11 70 434.8819112889489 0 434.8820678591728 PEAK CID FTMS 0 0 0 4546 226907.734375 0.7411378417545815 -108 0.5875968933105469 1 Unmodified _PECERRPSICL_ ENST00000522621.1_2_8:62044343-62212351:+|nuORF 1.3295316138638542 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.257 62437.3 1.0 409 4136 4546 HBL1_DMSO_200M_050219_1,4547 HBL1_DMSO_200M_050219_1,4547,PECERRPSICL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4556 20.845 800.0 156590.0 25 0 9847.4 + 28563 PTRRTGGTTG 10 174 335.17992710056427 1002.5179519018928 3 335.1800414919853 MULTI CID FTMS 0 0 0 4555 108275.6875 0.9988460789205336 -20 0.0974998474121093 1 Unmodified _PTRRTGGTTG_ REV__ENST00000488261.6_3_10:135273593-135278124:+|nuORF 6.1918466704503565 0.6979955778746556 3 Y 1 -1 15.713 0.0 0.0 1.5674 0.0 0.0 821.4442804925163 0.0 821.4442804925163 0.0 1.1092437480817807 0.0 0.0 0 0.5 0.0 0.0 0.0 Y 1.5674 - 72 + 1 2.257 103098.4 0.4699999988079071 410 4144 4555 HBL1_DMSO_200M_050219_1,4556 HBL1_DMSO_200M_050219_1,4556,PTRRTGGTTG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4565 20.889 800.0 29806.0 25 0 2168.0 -1 0 27 838.9761086495432 4189.844160914716 5 839.3771240115166 MULTI CID FTMS 0 0 0 4564 21053.658203125 0.267903248895777 1 -0.0162677764892578 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.258 28505.1 0.4399999976158142 411 4152 4564 HBL1_DMSO_200M_050219_1,4565 HBL1_DMSO_200M_050219_1,4565, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4570 20.917 800.0 62344.0 25 0 5591.3 -1 EYIILCSE 8 99 513.746130281932 1025.477707630664 2 513.7455932497978 MULTI CID FTMS 0 0 0 4569 87869.640625 0.7135746701070237 16 -0.1197853088378906 1 Carbamidomethyl (C) _EYIILC(Carbamidomethyl (C))SE_ ENSG00000131400|ENST00000253719|NAPSA 23.1484247019978 0.5573009939494978 3 E[PA]THKQSE 9 -1 + 65.094 0.0 0.0 6.3477 6.3477 91.862 0.0 0.0 0.0 53.98452863022516 12.3928282368163 12.3928282368163 21.059881482015925 0 2.337180496500464 0.0 1.0629529932484498 0.0 E[PA]THKQSE;{[ES]|[DT]|[{I|L}C]}[YR]KQSE;{M(Oxidation (M))|F}SQK{[ET]|[MV]}{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}[YK]RQSE;{[ES]|[DT]|[{I|L}C]}[YR]K[AG]SE;{M(Oxidation (M))|F}S[AG]K{[ET]|[MV]}{[WT]|[RM]};{M(Oxidation (M))|F}SQ[WH][KG]H;{M(Oxidation (M))|F}SQ[HT][RN]H;{[ES]|[DT]|[{I|L}C]}[YK]R[AG]SE;{[MG]|[TS]}[YR][VG]QSE 6.3477;4.294;3.8673;3.4184;3.3908;2.9641;2.8181;2.6451;2.5152;1.9692 -;-;-;-;-;-;-;-;-;- 225 + 1 2.258 45147.6 0.5199999809265137 412 4156 4569 HBL1_DMSO_200M_050219_1,4570 HBL1_DMSO_200M_050219_1,4570,EYIILCSE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4573 20.937 800.0 18065.0 25 0 2028.0 -1 0 45 706.3209133433647 2115.940910630294 3 706.3219482302666 MULTI CID FTMS 0 0 0 4572 54767.82421875 0.2953470302005279 -28 0.1657257080078125 1 3 Y 1 -1 5.4846 0.0 0.0 0.2592 0.0 0.0 1430.6355039914254 519.2141207330686 1949.8496247244937 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.2592 - 18 + 1 2.258 20854.9 0.4199999868869781 413 4158 4572 HBL1_DMSO_200M_050219_1,4573 HBL1_DMSO_200M_050219_1,4573, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4575 20.953 800.0 130460.0 25 0 15663.0 + 13525 HNGPEHWHK 9 139 381.1811994395072 1140.5217689187216 3 381.1806518435478 MULTI CID FTMS 0 0 0 4574 109219.609375 0.6986098772265266 7 -0.0518398284912109 1 Unmodified _HNGPEHWHK_ ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF;ENST00000520996.5_1_8:86376310-86386651:+|nuORF 39.21299971606389 0.0797768173001226 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WN]|[YH]}HWKH 8 6 + 45.493 0.0 0.0 3.9888 3.9888 79.011 0.0 0.0 0.0 7.156818820794932 8.226825097560422 7.156818820794932 7.156818820794932 0 1.035666875892183 2.0 0.0 0.3252574989159953 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WN]|[YH]}HWKH;[HN]G[EP]HWKH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WN]|[YH]}H{[DA]|[EG]}KH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WN]|[YH]}H{[SA]|[TG]}[RH];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HA][QT]WKH;[HN]G[EP]H{[SA]|[TG]}[RH];[WH]G[YQ]WKH;[HN]{[YC]|[HE]}[PG]WKH;[VP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[C(Carbamidomethyl (C))N]NKH;[WH]G[YQ]{[SA]|[TG]}[RH] 3.9888;3.3613;3.1767;2.7071;2.3637;2.0843;1.9501;1.3471;0.67951;0.6683 -;-;-;-;-;-;-;-;-;- 192 1 2.258 87058.8 0.9200000166893004 414 4159 4574 HBL1_DMSO_200M_050219_1,4575 HBL1_DMSO_200M_050219_1,4575,HNGPEHWHK True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4577 20.968 685.0 128110.0 25 0 7796.2 34591 SPHEAVGT 8 124 399.19312331365705 796.3716936941141 2 399.1928283572197 MULTI CID FTMS 0 0 0 4576 138003.9375 0.8435537124568661 31 -0.1419124603271484 1 Unmodified _SPHEAVGT_ ENST00000393473.6_1_2:99771434-99772854:+|nuORF 12.531546534597751 0.7257836412119636 3 VDAAEK 6 7 52.107 0.0 0.0 6.5431 0.0 0.0 165.05444623493287 0.0 165.05444623493287 0.0 40.32434817856439 0.0 0.0 0 2.3807196863200843 0.0 0.8494850021680094 0.3252574989159953 VDAAEK 6.5431 - 106 + 1 2.258 73643.5 1.0 415 4160 4576 HBL1_DMSO_200M_050219_1,4577 HBL1_DMSO_200M_050219_1,4577,SPHEAVGT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4580 20.977 152.0 396410.0 25 0 99583.0 + 4107 DAPAGRKV 8 65 407.2325850863368 812.4506172394736 2 407.2321349978447 MULTI CID FTMS 0 0 0 4579 336175.21875 0.16181104977302 54 -0.2538967132568359 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 21.74664581756881 0.5868176546531598 3 DAPA 4 4 60.433 0.0 0.0 7.4384 0.0 0.0 0.0 455.2725924127563 455.2725924127563 46.99978074068973 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + DAPA 7.4384 + + 33 + 1 2.258 51985.2 1.0 416 4162 4579 HBL1_DMSO_200M_050219_1,4580 HBL1_DMSO_200M_050219_1,4580,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4588 21.013 481.0 19900.0 25 0 2009.5 -1 0 32 529.9928494742011 2115.942292030404 4 530.2437011599541 MULTI CID FTMS 0 0 0 4587 35057.09765625 0.343342359191298 -17 0.1277446746826172 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.262 17717.2 1.0 417 4169 4587 HBL1_DMSO_200M_050219_1,4588 HBL1_DMSO_200M_050219_1,4588, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4619 21.143 800.0 130570.0 25 0 49948.0 34694 SPTEPQEYRVP 11 68 434.8819112889489 0 434.8817932009697 PEAK CID FTMS 0 0 0 4618 201898.4375 0.6594511757588575 -45 0.2338161468505859 1 Unmodified _SPTEPQEYRVP_ ENSG00000122386|ENST00000219091|ZNF205 1.3295316138638542 0.4761840153648598 3 {M(Oxidation (M))|F} 1 11 1.9897 0.0 0.0 0.22929 0.0 0.0 433.5267487480166 284.16193567447505 717.6886844224916 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.22929 - 1 + 1 2.262 85402.4 0.8199999928474426 418 4199 4618 HBL1_DMSO_200M_050219_1,4619 HBL1_DMSO_200M_050219_1,4619,SPTEPQEYRVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4629 21.186 504.0 43342.0 25 0 4561.3 -1 0 58 706.3209133433647 2115.940910630294 3 706.3216430544853 MULTI CID FTMS 0 0 0 4628 141887.375 0.7651575615240879 22 -0.1200294494628906 1 3 E 1 -1 4.6041 0.0 0.0 0.21759 0.0 0.0 1205.042425378144 778.8252657525999 1983.867691130744 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21759 - 6 + 1 2.262 28591.4 1.0 419 4208 4628 HBL1_DMSO_200M_050219_1,4629 HBL1_DMSO_200M_050219_1,4629, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4636 21.222 800.0 126310.0 25 0 7597.1 34592 SPHEAVGT 8 131 399.19312331365705 796.3716936941141 2 399.1926452517509 MULTI CID FTMS 0 0 0 4635 145083.6875 0.8868289225990875 85 -0.4585514068603515 1 Unmodified _SPHEAVGT_ ENST00000393473.6_1_2:99771434-99772854:+|nuORF 24.67388899826682 0.525179942228231 3 VDAAEQ 6 7 42.872 0.0 0.0 5.3834 0.0 0.0 165.05389601875157 0.0 165.05389601875157 0.0 21.673786317650453 0.0 0.0 0 1.6791746928241125 0.0 0.6694451763165201 0.0 VDAAEQ 5.3834 - 146 1 2.262 83137.9 0.5699999928474426 420 4214 4635 HBL1_DMSO_200M_050219_1,4636 HBL1_DMSO_200M_050219_1,4636,SPHEAVGT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4639 21.231 166.0 358900.0 25 0 99359.0 + 4108 DAPAGRKV 8 60 407.2325850863368 812.4506172394736 2 407.2322875857353 MULTI CID FTMS 0 0 0 4638 410656.09375 0.1976608920563846 108 -0.5641746520996094 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 21.74664581756881 0.5868176546531598 3 DAPA 4 4 57.423 0.0 0.0 7.0678 0.0 0.0 0.0 455.2744627066224 455.2744627066224 53.44335023848103 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + DAPA 7.0678 + + 19 + 1 2.262 52726.5 1.0 421 4216 4638 HBL1_DMSO_200M_050219_1,4639 HBL1_DMSO_200M_050219_1,4639,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4648 21.275 800.0 94497.0 25 0 11978.0 42824 VVLDNSGK 8 105 416.2321863599184 830.4498197866369 2 416.2324401736259 MULTI CID FTMS 0 0 0 4647 95651.4453125 0.0134934244795799 -151 0.8036994934082031 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 23.1484247019978 0.5573009939494978 3 VVSPASS[KG] 9 4 + 55.908 0.0 0.0 6.7322 6.7322 83.651 0.0 0.0 0.0 15.284919386223663 3.315468932362577 3.315468932362577 3.315468932362577 0 0.8494850021680094 2.0 0.4247425010840047 0.2742275032520141 VVSPASS[KG];VVSER{[QN]|[E{I|L}]|[KN]};VVSE[VG]{[QN]|[E{I|L}]|[KN]} 6.7322;6.333;5.2094 -;-;- 167 + 1 2.263 61826.4 0.5199999809265137 422 4224 4647 HBL1_DMSO_200M_050219_1,4648 HBL1_DMSO_200M_050219_1,4648,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4659 21.326 800.0 32377.0 25 0 1550.1 -1 0 49 798.3410476340935 2392.00131350248 3 798.6766845583916 MULTI CID FTMS 0 0 0 4658 38015.1796875 0.1734358282413436 -34 0.167022705078125 1 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ][NG]Q 7 -1 8.8325 0.0 0.0 0.36925 0.0 0.0 0.0 1567.6312933210927 1567.6312933210927 1.8428385129966447 0.0 0.0 0.0 0 0.0 0.0 0.25 0.7302046884880937 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ][NG]Q 0.36925 - 33 1 2.263 25107.1 0.449999988079071 423 4234 4658 HBL1_DMSO_200M_050219_1,4659 HBL1_DMSO_200M_050219_1,4659, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4671 21.382 800.0 122560.0 25 0 7673.1 23937 LVQWLGFAT 9 149 345.5271392484344 1033.5595883455032 3 345.5269653201103 MULTI CID FTMS 0 0 0 4670 66958.75 0.129406268088178 -75 0.3528633117675781 1 Unmodified _LVQWLGFAT_ ENSG00000187713|ENST00000343666|TMEM203 12.531546534597751 0.4974689918368763 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 8 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 25.49 9.2699 2.1596 2.4663 2.4663 49.331 0.0 0.0 0.0 0.0 11.510785828862105 0.0 0.0 0 0.3494850021680094 0.0 0.3494850021680094 0.1747425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.4663 - 123 + 1 2.263 82587.4 0.4900000095367431 424 4245 4670 HBL1_DMSO_200M_050219_1,4671 HBL1_DMSO_200M_050219_1,4671,LVQWLGFAT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4679 21.417 523.0 279470.0 25 0 30035.0 + -1 ELKHSKMK 8 145 339.52347558152985 1015.5485973447896 3 339.5232421755791 MULTI CID FTMS 0 0 0 4678 124574.859375 0.0629520459122182 -59 0.3023090362548828 1 Oxidation (M) _ELKHSKM(Oxidation (M))K_ REV__ENSG00000068745|ENST00000328631|IP6K2 8.155526934196011 0.7748286014565968 3 {I|L}P[HQ]K 5 -1 28.681 0.0 0.0 2.8242 0.0 0.0 394.187831819202 0.0 394.187831819202 0.0 19.59027206596038 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.6462566630072955 {I|L}P[HQ]K 2.8242 - 97 + 1 2.263 121826.2 1.0 425 4252 4678 HBL1_DMSO_200M_050219_1,4679 HBL1_DMSO_200M_050219_1,4679,ELKHSKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4680 21.431 800.0 156860.0 25 0 20404.0 32996 SENIPQELL 9 164 348.18489152295297 1041.5328451690589 3 348.1854736208916 MULTI CID FTMS 0 0 0 4678 76158.515625 0.197039044829698 -59 0.3023090362548828 2 Unmodified _SENIPQELL_ ENSG00000145604|ENST00000274255|SKP2;nc|ENSG00000145604|Q13309-2|SKP2 22.65808497894818 0.2428932432760099 3 SQDV 4 7 35.048 0.0 0.0 3.365 0.0 0.0 0.0 609.3232498537197 609.3232498537197 23.058356021749027 0.0 0.0 0.0 0 0.5891368308784531 0.0 0.0 0.5 SQDV 3.365 - 65 + 1 2.263 101384.6 0.4799999892711639 426 4252 4678 HBL1_DMSO_200M_050219_1,4680 HBL1_DMSO_200M_050219_1,4680,SENIPQELL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4692 21.486 800.0 115480.0 25 0 6353.5 34593 SPHEAVGT 8 132 399.19312331365705 796.3716936941141 2 399.1927978396416 MULTI CID FTMS 0 0 0 4691 69278.90625 0.4234696460174456 134 -0.8718338012695312 1 Unmodified _SPHEAVGT_ ENST00000393473.6_1_2:99771434-99772854:+|nuORF 16.942295170755138 0.6606234159769251 3 VDAAEK 6 7 48.232 0.0 0.0 6.0565 0.0 0.0 165.05572797321412 0.0 165.05572797321412 0.0 38.2319095436452 0.0 0.0 0 2.3494850021680094 0.0 0.8807196863200843 0.2742275032520141 VDAAEK 6.0565 - 100 + 1 2.262 78087.5 0.5799999833106995 427 4263 4691 HBL1_DMSO_200M_050219_1,4692 HBL1_DMSO_200M_050219_1,4692,SPHEAVGT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4694 21.492 196.0 277420.0 25 0 78616.0 7445 EGPAGVRK 8 51 407.2325850863368 812.4506172394736 2 407.2323486208916 MULTI CID FTMS 0 0 0 4693 402248.65625 0.1936141443727377 156 -1.0001811981201172 1 Unmodified _EGPAGVRK_ ENST00000523135.1_1_5:179680521-179691830:-|nuORF 16.942295170755138 0.6606234159769251 3 {[DA]|[EG]}PA 4 4 41.682 0.0 0.0 5.1305 0.0 0.0 0.0 455.2734545779773 455.2734545779773 37.07834387816234 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + {[DA]|[EG]}PA 5.1305 + + 14 + 1 2.262 48702.8 1.0 428 4264 4693 HBL1_DMSO_200M_050219_1,4694 HBL1_DMSO_200M_050219_1,4694,EGPAGVRK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4701 21.516 96.0 423310.0 25 0 80548.0 + 42951 VVSPKSQS 8 53 416.2321863599184 830.4498197866369 2 416.2319824099541 MULTI CID FTMS 0 0 0 4700 664856.8125 0.0937904823068117 -105 0.5267314910888672 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 14.838274106304384 0.6917062315640577 3 VVSPAS 6 3 56.911 0.0 0.0 6.8531 0.0 0.0 0.0 287.13666711978755 287.13666711978755 38.15044357464103 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 VVSPAS 6.8531 - 54 + 1 2.262 37117.4 1.0 429 4270 4700 HBL1_DMSO_200M_050219_1,4701 HBL1_DMSO_200M_050219_1,4701,VVSPKSQS False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4708 21.552 800.0 45607.0 25 0 2110.3 + -1 NEQKVCTNN 9 71 553.7465441589228 0 553.7463867068291 PEAK CID FTMS 0 0 0 4707 27951.013671875 0.3265972730445337 1 -0.0162601470947265 1 Carbamidomethyl (C) _NEQKVC(Carbamidomethyl (C))TNN_ REV__ENSG00000137642|ENST00000260197|SORL1 14.838274106304384 0.2567717476666951 3 QAED 4 -1 22.805 0.0 0.0 2.0629 0.0 0.0 260.11245881496694 399.17783533267817 659.2902941476451 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 QAED 2.0629 - 28 + 1 2.262 33826.5 0.5099999904632568 430 4276 4707 HBL1_DMSO_200M_050219_1,4708 HBL1_DMSO_200M_050219_1,4708,NEQKVCTNN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4712 21.576 800.0 32862.0 25 0 9014.1 -1 0 24 1130.109204639407 3387.305784518421 3 1130.780566394329 MULTI CID FTMS 0 0 0 4711 35502.55078125 0.4176376841669159 1 -0.0162696838378906 1 3 E 1 -1 5.4846 0.0 0.0 0.16191 0.0 0.0 2731.078563914709 524.1612032525999 3255.239767167309 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16191 - 1 + 1 2.262 30764.2 0.3899999856948852 431 4279 4711 HBL1_DMSO_200M_050219_1,4712 HBL1_DMSO_200M_050219_1,4712, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4714 21.587 446.0 59859.0 25 0 3912.5 -1 0 40 798.3410476340935 2392.00131350248 3 798.6752807497978 MULTI CID FTMS 0 0 0 4713 92839.0546875 0.4235576018640898 12 -0.0594673156738281 1 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ]NGQ 7 -1 13.829 0.0 0.0 0.57814 0.0 0.0 0.0 1567.6331854109364 1567.6331854109364 13.829175771389616 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ]NGQ 0.57814 - 57 1 2.262 28541.5 1.0 432 4280 4713 HBL1_DMSO_200M_050219_1,4714 HBL1_DMSO_200M_050219_1,4714, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4724 21.628 426.0 403920.0 25 0 79627.0 23938 LVQWLGFAT 9 148 345.5271392484344 1033.5595883455032 3 345.5266296267509 MULTI CID FTMS 0 0 0 4723 305528.28125 0.5904721141293372 -31 0.1675319671630859 1 Unmodified _LVQWLGFAT_ ENSG00000187713|ENST00000343666|TMEM203 12.531546534597751 0.4974689918368763 3 {I|L}PQHK 5 7 32.88 0.0 0.0 3.1813 0.0 0.0 412.1994909492872 0.0 412.1994909492872 0.0 10.045150819179144 0.0 0.0 0 0.0 0.0 0.0 1.048455006504028 {I|L}PQHK 3.1813 - 229 + 1 2.262 146167.5 1.0 433 4289 4723 HBL1_DMSO_200M_050219_1,4724 HBL1_DMSO_200M_050219_1,4724,LVQWLGFAT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4734 21.664 34.0 1388700.0 25 0 304420.0 + -1 ELKHSKMK 8 74 339.52347558152985 1015.5485973447896 3 339.5232116580009 MULTI CID FTMS 0 0 0 4733 1329128.875 0.6716554398057492 -13 0.0570812225341796 1 Oxidation (M) _ELKHSKM(Oxidation (M))K_ REV__ENSG00000068745|ENST00000328631|IP6K2 8.155526934196011 0.7748286014565968 3 {I|L}P[HQ]K 5 -1 28.812 0.0 0.0 2.8371 0.0 0.0 394.19204324498327 0.0 394.19204324498327 0.0 23.890303956054662 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.6549471895720985 {I|L}P[HQ]K 2.8371 - 63 + 1 2.262 45620.6 1.0 434 4298 4733 HBL1_DMSO_200M_050219_1,4734 HBL1_DMSO_200M_050219_1,4734,ELKHSKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4737 21.676 225.0 325940.0 25 0 81450.0 32997 SENIPQELL 9 74 348.18489152295297 1041.5328451690589 3 348.1844360232353 MULTI CID FTMS 0 0 0 4736 317773.3125 0.8221503459399805 -11 0.0499763488769531 1 Unmodified _SENIPQELL_ ENSG00000145604|ENST00000274255|SKP2;nc|ENSG00000145604|Q13309-2|SKP2 22.65808497894818 0.2428932432760099 3 SQDV 4 7 36.899 0.0 0.0 3.5428 0.0 0.0 0.0 609.3229936299111 609.3229936299111 24.90926274548464 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.5 SQDV 3.5428 - 36 + 1 2.26 67388.7 1.0 435 4300 4736 HBL1_DMSO_200M_050219_1,4737 HBL1_DMSO_200M_050219_1,4737,SENIPQELL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4740 21.696 800.0 23126.0 25 0 1594.7 -1 0 44 685.7997334429061 2739.1698279052243 4 686.0515014529228 MULTI CID FTMS 0 0 0 4739 52063.50390625 0.5498781610989826 -5 0.0243721008300781 1 3 SS 2 -1 10.969 0.0 0.0 0.40045 0.0 0.0 1049.45038260971 1512.630445157103 2562.080827766813 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SS 0.40045 - 20 + 1 2.26 22730.1 0.449999988079071 436 4302 4739 HBL1_DMSO_200M_050219_1,4740 HBL1_DMSO_200M_050219_1,4740, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4753 21.754 744.0 234010.0 25 0 65457.0 + 4109 DAPAGRKV 8 105 407.2326730539738 812.4507931747477 2 407.2321349978447 MULTI CID FTMS 0 0 0 4752 274198.3125 0.2172406191356135 -30 0.1405506134033203 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 42.09456458481378 0.1992492688217789 3 DAPA{[NV]|[RG]}VK 8 2 + 65.099 0.0 0.0 8.0127 8.0127 83.776 0.0 0.0 0.0 26.40978057358332 1.5751564735983123 1.5751564735983123 1.5751564735983123 0 0.8494850021680094 2.0 0.0 0.8882104921644451 DAPA{[NV]|[RG]}VK;DAPA{[NV]|[RG]}KV 8.0127;7.8188 -;+ + 67 + 1 2.26 138289.8 1.0 437 4314 4752 HBL1_DMSO_200M_050219_1,4753 HBL1_DMSO_200M_050219_1,4753,DAPAGRKV False True DAPAGRKV 21.754043 407.232134997845 986912720.0 4752.0 ENSG00000161016|ENST00000528957|RPL8;;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 5.506234963734944 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4758 21.77 18.0 2171300.0 25 0 387650.0 42825 VVLDNSGK 8 61 416.2321863599184 830.4498197866369 2 416.2319518923759 MULTI CID FTMS 0 0 0 4757 2826302.0 0.3987027322890017 -57 0.3036155700683594 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 16.942295170755138 0.6606234159769251 3 VVSPASS[KG] 9 4 + 60.952 0.0 0.0 7.3397 7.3397 96.113 0.0 0.0 0.0 53.9625938194564 5.686814654273675 5.686814654273675 60.95229386281659 0 0.805462187404089 2.0 0.0 0.3054621874040891 VVSPASS[KG] 7.3397 - 70 + 1 2.26 36412.1 1.0 438 4318 4757 HBL1_DMSO_200M_050219_1,4758 HBL1_DMSO_200M_050219_1,4758,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4769 21.816 451.0 208370.0 25 0 14060.0 + -1 HAMMGLQT 8 150 302.1385751833515 903.3938961502546 3 302.1381103396416 MULTI CID FTMS 0 0 0 4768 97980.734375 0.1018515715220805 -63 0.3133792877197265 1 Oxidation (M) _HAMM(Oxidation (M))GLQT_ REV__ENST00000482382.1_1_3:151836255-151869472:-|nuORF 3.5964929083625545 0.8025018637788065 3 [HA][QP]M 5 -1 15.017 0.0 0.0 1.6623 0.0 0.0 0.0 336.1110341719921 336.1110341719921 1.3723391072931967 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 [HA][QP]M 1.6623 - 46 1 2.26 78442.1 1.0 439 4328 4768 HBL1_DMSO_200M_050219_1,4769 HBL1_DMSO_200M_050219_1,4769,HAMMGLQT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4773 21.84 800.0 33902.0 25 0 5344.8 -1 0 41 593.1551263631862 592.1478498965862 1 595.1556884646416 MULTI CID FTMS 0 0 0 4772 65923.3984375 0.1898928694107345 18 -0.097686767578125 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.26 28372.2 0.4900000095367431 440 4331 4772 HBL1_DMSO_200M_050219_1,4773 HBL1_DMSO_200M_050219_1,4773, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4781 21.88 800.0 48906.0 25 0 2535.2 + -1 NEQKVCTNN 9 70 553.7467297092551 1105.47890648531 2 553.7471191287041 MULTI CID FTMS 0 0 0 4780 47500.39453125 0.5438054455581034 1 -0.0162200927734375 1 Carbamidomethyl (C) _NEQKVC(Carbamidomethyl (C))TNN_ REV__ENSG00000137642|ENST00000260197|SORL1 14.838274106304384 0.4350285940865338 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QN 9 -1 + 32.905 0.0 0.0 2.9765 2.9765 68.132 0.0 0.0 0.0 19.4099998328936 2.058546584526802 2.058546584526802 0.7783248807594845 0 0.0 0.0 0.0 0.5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAED[RN]N;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SH;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EAQQN;[WH][WH]AQQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAE[HA][YQ];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]AE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]N;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]AED[RN]N 2.9765;2.9061;2.879;2.7739;2.3148;2.2711;2.2276;2.1436;2.1436;2.0732 -;-;-;-;-;-;-;-;-;- 195 + 1 2.257 39812.4 0.5400000214576721 441 4338 4780 HBL1_DMSO_200M_050219_1,4781 HBL1_DMSO_200M_050219_1,4781,NEQKVCTNN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4783 21.886 186.0 486520.0 25 0 107360.0 + 37373 TKTLRACEI 9 96 345.5271392484344 1033.5595883455032 3 345.5267822146416 MULTI CID FTMS 0 0 0 4782 317546.21875 0.6136983010278675 19 -0.0891971588134765 1 Unmodified _TKTLRACEI_ REV__ENST00000490962.1_1_3:72926686-72926866:-|nuORF 9.38312468134398 0.5871240394367778 3 {M(Oxidation (M))|F}{I|L}PQHK 6 -1 30.196 0.0 0.0 2.9216 0.0 0.0 265.162995183197 0.0 265.162995183197 0.0 12.463764468809131 0.0 0.0 0 0.0 0.0 0.0 0.6989700043360187 {M(Oxidation (M))|F}{I|L}PQHK 2.9216 - 216 + 1 2.257 78400.6 1.0 442 4339 4782 HBL1_DMSO_200M_050219_1,4783 HBL1_DMSO_200M_050219_1,4783,TKTLRACEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4792 21.917 43.0 1209700.0 25 0 251670.0 + -1 ELKHSKMK 8 70 339.52347558152985 1015.5485973447896 3 339.5232421755791 MULTI CID FTMS 0 0 0 4791 1211739.0 0.6123342185119398 36 -0.2525806427001953 1 Oxidation (M) _ELKHSKM(Oxidation (M))K_ REV__ENSG00000068745|ENST00000328631|IP6K2 8.155526934196011 0.7748286014565968 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]P{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]P + + 24.088 -0.51153 -0.10064 2.372 2.372 49.237 0.0 0.0 0.0 0.0 12.668371234652202 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.2215141619232908 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]P{I|L}T{M(Oxidation (M))|F}K 2.372 - 56 + 1 2.257 53424.9 1.0 443 4347 4791 HBL1_DMSO_200M_050219_1,4792 HBL1_DMSO_200M_050219_1,4792,ELKHSKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4796 21.941 800.0 82380.0 25 0 5938.7 + + 33306 MAHMASKE 8 105 452.7042777727317 903.3940026122632 2 452.7045471072197 MULTI CID FTMS 0 0 0 4795 75080.53125 0.2902765603601851 -44 0.2176742553710937 1 Unmodified _SFSYGSKE_ ENST00000432206.1_1_20:13373901-13374318:+|nuORF;ENST00000447427.2_1_1:120101380-120101404:-|nuORF;nc|ENSG00000111640|P04406-2|GAPDH;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;ENSG00000111640|ENST00000229239|GAPDH;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 21.53697664764585 0.591232569029014 3 MAHMASKE 8 -1 + 87.673 0.0 0.0 9.7048 9.7048 98.269 0.0 0.0 0.0 76.0788248705584 16.420692587089448 16.420692587089448 26.248037067706363 0 2.048455006504028 1.5228787452803376 0.2396518287104437 0.0 MAHMASKE;{[DS]|[MA]|[CV]|TT}HMASKE;{[DS]|[MA]|[CV]|TT}HAMSKE;MAHM{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R;[HM]AMASKE;{[DS]|[MA]|[CV]|TT}HS{[DS]|[MA]|[CV]|TT}KE;MAH[QP]{[SA]|[TG]}Y;[HA]MMASKE;[HM]AAMSKE;[HA]MAMSKE 9.7048;6.7993;6.0447;5.8349;5.2266;4.7294;4.7231;4.6984;4.4719;3.9438 -;-;-;-;-;-;-;-;-;- 312 + 1 2.257 55163.9 0.5400000214576721 444 4350 4795 HBL1_DMSO_200M_050219_1,4796 HBL1_DMSO_200M_050219_1,4796,SFSYGSKE False False MAHMASKE 21.941482 452.70454710722 44499154.75 4795.0 ENST00000432206.1_1_20:13373901-13374318:+|nuORF;;ENST00000447427.2_1_1:120101380-120101404:-|nuORF;;nc|ENSG00000111640|P04406-2|GAPDH;;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;;ENSG00000111640|ENST00000229239|GAPDH;;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 8.875549952189127 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4805 21.985 800.0 59645.0 25 0 4418.5 + 32685 SDSDRGLV 8 105 424.7093209263318 0 424.7097045779228 PEAK CID FTMS 0 0 0 4804 72133.9296875 0.5899550227761411 -41 0.2070884704589843 1 Unmodified _SDSDRGLV_ REV__ENSG00000133030|ENST00000651222|MPRIP 13.50788311687929 0.5021269579892848 3 V 1 -1 5.9691 0.0 0.0 0.7044 0.0 0.0 546.2732123098918 199.03635584049064 745.3095681503825 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V 0.7044 + + 15 + 1 2.257 41218.6 0.550000011920929 445 4358 4804 HBL1_DMSO_200M_050219_1,4805 HBL1_DMSO_200M_050219_1,4805,SDSDRGLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4808 22.005 800.0 27170.0 25 0 982.02 -1 0 49 644.7949199721453 2575.150574022181 4 645.2950927615166 MULTI CID FTMS 0 0 0 -1 0 1 3 H 1 -1 3.9794 0.0 0.0 0.15453 0.0 0.0 1806.8069593755 628.2431734674436 2435.050132842943 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.15453 - 9 + 1 2.257 26543.7 0.4399999976158142 446 4360 4807 HBL1_DMSO_200M_050219_1,4808 HBL1_DMSO_200M_050219_1,4808, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4810 22.01 84.0 722360.0 25 0 198060.0 + 4110 DAPAGRKV 8 64 407.2326085053582 812.4506640775164 2 407.2323791384697 MULTI CID FTMS 0 0 0 4809 837878.9375 0.5632231150452799 -18 0.1077003479003906 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 21.74664581756881 0.5868176546531598 3 DAPA 4 4 59.68 0.0 0.0 7.3457 0.0 0.0 0.0 455.273773335798 455.273773335798 55.21652514092061 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + DAPA 7.3457 + + 17 + 1 2.257 52516.1 1.0 447 4361 4809 HBL1_DMSO_200M_050219_1,4810 HBL1_DMSO_200M_050219_1,4810,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4814 22.022 9.2 4307100.0 25 0 825690.0 + 42952 VVSPKSQS 8 58 416.2321863599184 830.4498197866369 2 416.2320129275322 MULTI CID FTMS 0 0 0 4813 6299551.0 0.8886694330237581 -11 0.0685310363769531 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 14.838274106304384 0.6917062315640577 3 VVSPAS 6 3 54.411 0.0 0.0 6.552 0.0 0.0 0.0 287.1366060846313 287.1366060846313 47.42152505736741 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 VVSPAS 6.552 - 53 + 1 2.257 38382.0 1.0 448 4364 4813 HBL1_DMSO_200M_050219_1,4814 HBL1_DMSO_200M_050219_1,4814,VVSPKSQS False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4815 22.036 800.0 42826.0 25 0 3487.2 + 17381 KMFNDWQLMHQ 11 84 493.2306118047831 1476.6700060145492 3 493.2305480837822 MULTI CID FTMS 0 0 0 4813 63204.015625 0.5601210509079857 -1 0.0039520263671875 2 Unmodified _KMFNDWQLMHQ_ REV__ENSG00000188428|ENST00000397457|BLOC1S5;REV__ENST00000244777.6_2_6:8015884-8027440:-|nuORF;REV__nc|ENSG00000188428|Q8TDH9-3|BLOC1S5 7.608950283845883 0.8392484121837455 3 HEQ 3 -1 14.439 0.0 0.0 0.97779 0.0 0.0 1064.4999448346648 0.0 1064.4999448346648 0.0 3.179653696512254 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.2215141619232908 HEQ 0.97779 - 71 + 1 2.257 34561.1 0.5400000214576721 449 4364 4813 HBL1_DMSO_200M_050219_1,4815 HBL1_DMSO_200M_050219_1,4815,KMFNDWQLMHQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4816 22.044 435.0 27660.0 25 0 3445.1 -1 0 36 608.7607915096717 2431.0140601722865 4 608.7603027224541 MULTI CID FTMS 0 0 0 4813 89470.359375 1.0 0 0.0 3 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 8 1 2.257 19696.1 1.0 450 4364 4813 HBL1_DMSO_200M_050219_1,4816 HBL1_DMSO_200M_050219_1,4816, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4820 22.068 800.0 28705.0 25 0 1211.7 -1 0 49 755.6547313756085 2263.942364727025 3 755.9896118044853 MULTI CID FTMS 0 0 0 4819 23744.76171875 0.2214529043543748 -11 0.0906715393066406 1 3 TG[DV]Q 5 -1 15.674 0.0 0.0 0.69234 0.0 0.0 1198.4899392044315 562.2003292941026 1760.690268498534 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.424742501084005 TG[DV]Q 0.69234 - 118 + 1 2.257 23359.2 0.5199999809265137 451 4367 4819 HBL1_DMSO_200M_050219_1,4820 HBL1_DMSO_200M_050219_1,4820, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4822 22.072 110.0 531660.0 25 0 55819.0 + 24212 MAHVFDGQ 8 86 302.1385751833515 903.3938961502546 3 302.1385375857353 MULTI CID FTMS 0 0 0 4821 579373.875 0.6022626799441915 -23 0.1626510620117187 1 Unmodified _MAHVFDGQ_ REV__ENSG00000089094|ENST00000377071|KDM2B;REV__ENST00000539394.5_1_12:122012457-122017978:-|nuORF;REV__ENST00000540191.1_1_12:122012416-122017978:-|nuORF;REV__nc|ENSG00000089094|Q8NHM5-2|KDM2B;REV__nc|ENSG00000089094|Q8NHM5-3|KDM2B;REV__nc|ENSG00000089094|Q8NHM5-4|KDM2B 10.823927491677226 0.7510103885582552 3 [HA]MMASKE 8 -1 [HA]M + + 26.381 22.051 6.5022 2.9202 2.9202 50.064 0.0 0.0 0.0 0.0 3.3605339711002173 0.0 0.0 0 0.3807196863200844 0.0 0.2396518287104437 0.0 [HA]MMASKE 2.9202 - 81 + 1 2.257 57612.4 1.0 452 4368 4821 HBL1_DMSO_200M_050219_1,4822 HBL1_DMSO_200M_050219_1,4822,MAHVFDGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4826 22.096 800.0 36553.0 25 0 6081.8 + 42191 VSEFERQWD 9 56 598.2701924325085 0 598.2701904177666 PEAK CID FTMS 0 0 0 4825 48844.5 0.5580573333516612 -6 0.0363178253173828 1 Unmodified _VSEFERQWD_ REV__ENSG00000167216|ENST00000683218|KATNAL2;REV__nc|ENSG00000167216|Q8IYT4-2|KATNAL2 4.3292370932331545 0.3444685223463734 3 MV 2 -1 4.6927 0.0 0.0 0.39285 0.0 0.0 831.3715788574012 130.01473413638908 961.3863129937904 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MV 0.39285 - 17 + 1 2.257 32094.9 0.5099999904632568 453 4371 4825 HBL1_DMSO_200M_050219_1,4826 HBL1_DMSO_200M_050219_1,4826,VSEFERQWD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4837 22.148 800.0 177280.0 25 0 24996.0 23939 LVQWLGFAT 9 162 345.5271392484344 1033.5595883455032 3 345.5275146365166 MULTI CID FTMS 0 0 0 4836 129338.4921875 0.2499630234157051 61 -0.4747219085693359 1 Unmodified _LVQWLGFAT_ ENSG00000187713|ENST00000343666|TMEM203 12.531546534597751 0.4974689918368763 3 {I|L}T{M(Oxidation (M))|F}K 4 7 19.418 0.0 0.0 1.8787 0.0 0.0 526.2875276590909 0.0 526.2875276590909 0.0 8.704197296802718 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.2302046884880938 {I|L}T{M(Oxidation (M))|F}K 1.8787 - 153 + 1 2.256 117179.8 0.6000000238418579 454 4381 4836 HBL1_DMSO_200M_050219_1,4837 HBL1_DMSO_200M_050219_1,4837,LVQWLGFAT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4838 22.162 800.0 61303.0 25 0 3443.1 + -1 NEQKVCTNN 9 94 553.7466353836824 1105.4787178341646 2 553.7463256716728 MULTI CID FTMS 0 0 0 4836 93022.2734375 1.0 0 0.0 2 Carbamidomethyl (C) _NEQKVC(Carbamidomethyl (C))TNN_ REV__ENSG00000137642|ENST00000260197|SORL1 30.63653989081413 0.1413794767160703 3 {[QD]|[EN]|[WG]|[KD]|[RS]}Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQN 9 -1 + 42.003 0.0 0.0 3.7995 3.7995 77.856 0.0 0.0 0.0 6.505149978319892 7.358631114164773 6.505149978319892 6.505149978319892 0 1.079689690656103 0.0 0.7302046884880937 0.7302046884880937 {[QD]|[EN]|[WG]|[KD]|[RS]}Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQN;{[QN]|[E{I|L}]|[KN]}E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ESH;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAED[RN]N;{[QD]|[EN]|[WG]|[KD]|[RS]}Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[AG]QN;{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SH;[QA]GD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQN;[C(Carbamidomethyl (C))K]QATEQQN 3.7995;3.211;3.1338;3.1056;2.9977;2.9665;2.9665;2.9563;2.8574;2.8246 -;-;-;-;-;-;-;-;-;- 344 1 2.256 41256.3 0.6000000238418579 455 4381 4836 HBL1_DMSO_200M_050219_1,4838 HBL1_DMSO_200M_050219_1,4838,NEQKVCTNN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4841 22.171 158.0 447100.0 25 0 64691.0 + -1 ELKHSKMK 8 84 339.52347558152985 1015.5485973447896 3 339.5233947634697 MULTI CID FTMS 0 0 0 4840 376592.875 0.1903055887532625 72 -0.6141147613525391 1 Oxidation (M) _ELKHSKM(Oxidation (M))K_ REV__ENSG00000068745|ENST00000328631|IP6K2 8.155526934196011 0.7748286014565968 3 {I|L}P[HQ]K 5 -1 29.576 0.0 0.0 2.9123 0.0 0.0 394.18716043248327 0.0 394.18716043248327 0.0 24.091218246911417 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.6643943297944485 {I|L}P[HQ]K 2.9123 - 78 + 1 2.256 64275.8 1.0 456 4383 4840 HBL1_DMSO_200M_050219_1,4841 HBL1_DMSO_200M_050219_1,4841,ELKHSKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4845 22.195 800.0 156270.0 25 0 12513.0 + 33307 SFSYGSKE 8 124 452.7042777727317 903.3940026122632 2 452.7046081423759 MULTI CID FTMS 0 0 0 4844 201158.71875 0.7777204022542379 -8 0.0587615966796875 1 Unmodified _SFSYGSKE_ REV__ENST00000525598.1_1_11:118984446-118985209:+|nuORF 27.628801355627647 0.4629596117395134 3 MAHMASKE 8 -1 + 103.02 0.0 0.0 11.403 11.403 98.697 0.0 0.0 0.0 60.84675556591044 16.766449332505147 16.766449332505147 26.95046257204389 0 2.1989700043360187 1.5228787452803376 0.5484550065040282 0.7742275032520141 MAHMASKE;MA{M(Oxidation (M))|F}KSA{[{M(Oxidation (M))|F}C]|[YS]};{[DS]|[MA]|[CV]|TT}HMASKE;MAH[QP]A{[{M(Oxidation (M))|F}C]|[YS]};{[DS]|[MA]|[CV]|TT}HAMSKE;[HM]AMASKE;{[DS]|[MA]|[CV]|TT}HSAMKE;MA[YK]AA{[{M(Oxidation (M))|F}C]|[YS]};{[DS]|[MA]|[CV]|TT}HASMKE;[HM]AAMSKE 11.403;8.4202;7.9359;7.2357;6.942;6.774;6.7125;6.7119;6.08;5.78 -;-;-;-;-;-;-;-;-;- 654 + 1 2.256 103226.8 0.7200000286102295 457 4386 4844 HBL1_DMSO_200M_050219_1,4845 HBL1_DMSO_200M_050219_1,4845,SFSYGSKE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4849 22.219 800.0 27687.0 25 0 1761.4 + 31729 RRRRYPRRQQA 11 27 771.951750028723 0 771.9518920779228 PEAK CID FTMS 0 0 0 4848 33238.10546875 0.4572889142885887 1 -0.016143798828125 1 Unmodified _RRRRYPRRQQA_ REV__ENSG00000065978|ENST00000321358|YBX1 0.0 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.256 25608.3 0.4799999892711639 458 4389 4848 HBL1_DMSO_200M_050219_1,4849 HBL1_DMSO_200M_050219_1,4849,RRRRYPRRQQA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4852 22.239 800.0 70757.0 25 0 5122.0 + 32660 SDANKNTV 8 116 424.7093209263318 0 424.7088500857353 PEAK CID FTMS 0 0 0 4851 86826.5625 0.7101202842985835 -8 0.0572414398193359 1 Unmodified _SDANKNTV_ REV__ENSG00000196588|ENST00000355630|MRTFA;REV__nc|ENSG00000196588|Q969V6|MRTFA 18.13498045792455 0.4501116112875982 3 V 1 -1 6.9897 0.0 0.0 0.82484 0.0 0.0 546.272998686845 199.03627954654533 745.3092782333903 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V 0.82484 + + 10 + 1 2.256 49727.0 0.6000000238418579 459 4391 4851 HBL1_DMSO_200M_050219_1,4852 HBL1_DMSO_200M_050219_1,4852,SDANKNTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4853 22.253 800.0 18027.0 25 0 1310.0 -1 0 26 753.9438037521168 3764.682636427584 5 754.3463622927666 MULTI CID FTMS 0 0 0 4851 66666.96875 1.0 0 0.0 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.256 19986.4 0.4799999892711639 460 4391 4851 HBL1_DMSO_200M_050219_1,4853 HBL1_DMSO_200M_050219_1,4853, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4856 22.261 63.0 1053300.0 25 0 335510.0 + 4111 DAPAGRKV 8 50 407.2326085053582 812.4506640775164 2 407.2324401736259 MULTI CID FTMS 0 0 0 4855 1180858.125 0.7937740905308632 14 -0.1721706390380859 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 16.942295170755138 0.6606234159769251 3 DAPA 4 4 53.175 0.0 0.0 6.5451 0.0 0.0 0.0 455.27458530614126 455.27458530614126 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + DAPA 6.5451 + + 12 + 1 2.257 56710.9 1.0 461 4393 4855 HBL1_DMSO_200M_050219_1,4856 HBL1_DMSO_200M_050219_1,4856,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4857 22.275 800.0 69726.0 25 0 11596.0 -1 0 65 666.9026992342249 3329.4771138381243 5 667.5056640505791 MULTI CID FTMS 0 0 0 4855 62350.7109375 0.6963285508115205 1 -0.0184745788574218 2 3 R[H{I|L}]QG{[CA]|SS}SN 9 -1 19.499 0.0 0.0 0.58564 0.0 0.0 1840.7940826875367 519.2425631158811 2360.0366458034177 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R[H{I|L}]QG{[CA]|SS}SN 0.58564 - 130 + 1 2.257 52151.9 0.4900000095367431 462 4393 4855 HBL1_DMSO_200M_050219_1,4857 HBL1_DMSO_200M_050219_1,4857, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4859 22.28 11.0 4018700.0 25 0 838660.0 42826 VVLDNSGK 8 55 416.2321863599184 830.4498197866369 2 416.2320129275322 MULTI CID FTMS 0 0 0 4858 5813827.5 0.8201490531821923 19 -0.1828975677490234 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 16.942295170755138 0.6606234159769251 3 VVSPASS[KG] 9 4 + 60.908 0.0 0.0 7.3343 7.3343 96.087 0.0 0.0 0.0 35.145228064086 5.66442754764136 5.66442754764136 60.90751964955196 0 0.7742275032520141 2.0 0.0 0.2742275032520141 VVSPASS[KG] 7.3343 - 72 + 1 2.257 43060.5 1.0 463 4394 4858 HBL1_DMSO_200M_050219_1,4859 HBL1_DMSO_200M_050219_1,4859,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4860 22.294 800.0 28181.0 25 0 911.81 -1 0 49 826.3612669641175 4126.769952487587 5 826.7628661990166 MULTI CID FTMS 0 0 0 4858 110946.28125 0.6870543087958246 -44 0.3497810363769531 2 3 P{[{M(Oxidation (M))|F}D]|MM} 3 -1 10.458 0.0 0.0 0.25341 0.0 0.0 3749.6200867573816 0.0 3749.6200867573816 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{[{M(Oxidation (M))|F}D]|MM} 0.25341 - 3 1 2.257 27328.7 0.4099999964237213 464 4394 4858 HBL1_DMSO_200M_050219_1,4860 HBL1_DMSO_200M_050219_1,4860, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4863 22.314 800.0 61482.0 25 0 2488.0 -1 0 52 771.349823187482 3851.7127336044096 5 771.5510131716728 MULTI CID FTMS 0 0 0 4862 54923.62109375 0.442419180672019 -1 0.0037117004394531 1 3 D 1 -1 6.9897 0.0 0.0 0.18147 0.0 0.0 2069.670571594447 1664.0056856744752 3733.676257268922 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.18147 - 1 + 1 2.257 43945.9 0.5 465 4396 4862 HBL1_DMSO_200M_050219_1,4863 HBL1_DMSO_200M_050219_1,4863, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4864 22.328 800.0 57845.0 25 0 3482.8 + 14328 IEQEWHSDEEL 11 79 472.20806057723166 1413.602352331895 3 472.5417053103447 MULTI CID FTMS 0 0 0 4862 71439.28125 1.0 0 0.0 2 Unmodified _IEQEWHSDEEL_ REV__ENST00000348993.9_1_15:85175130-85180634:+|nuORF;REV__ENST00000530891.3_1_15:85175130-85175559:+|nuORF;REV__nc|ENSG00000176700|Q9GZW5-2|SCAND2P;REV__nc|ENSG00000176700|Q9GZW5|SCAND2P 2.843284757254958 0.8617331327080043 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HTGQ[SG]HY 12 -1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HT + + 21.56 -1.6106 -0.21017 1.5252 1.5252 48.542 0.0 0.0 0.0 0.0 6.933612207359907 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HTGQ[SG]HY 1.5252 - 374 + 1 2.257 40488.4 0.4699999988079071 466 4396 4862 HBL1_DMSO_200M_050219_1,4864 HBL1_DMSO_200M_050219_1,4864,IEQEWHSDEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4865 22.341 800.0 33242.0 25 0 3017.9 -1 MQSHKIYQYYF 11 31 783.3578888504861 0 783.1559936404228 PEAK CID FTMS 0 0 0 -1 0 3 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))QSHKIYQYYF_ ENST00000589950.1_1_17:43228002-43228083:-|nuORF 0.3506318815782774 0.47618401536486 3 C 1 -1 3.4949 0.0 0.0 0.22336 0.0 0.0 691.5592702773409 767.1172579400999 1458.6765282174408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.22336 - 1 + 1 2.257 31945.0 0.449999988079071 467 4396 4862 HBL1_DMSO_200M_050219_1,4865 HBL1_DMSO_200M_050219_1,4865,MQSHKIYQYYF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4867 22.346 82.0 626280.0 25 0 61288.0 + -1 HAMAAAVMS 9 72 302.1385751833515 903.3938961502546 3 302.1385070681572 MULTI CID FTMS 0 0 0 4866 668766.375 0.6951867294051913 6 -0.050302505493164 1 Oxidation (M) _HAMAAAVM(Oxidation (M))S_ REV__ENSG00000037757|ENST00000040663|MRI1;REV__ENST00000591688.5_1_19:13875372-13879601:+|nuORF;REV__nc|ENSG00000037757|Q9BV20-2|MRI1 8.745405648335112 0.6093864874670651 3 {[DS]|[MA]|[CV]|TT}HMASKE 8 -1 + 43.238 0.0 0.0 4.7862 4.7862 86.312 0.0 0.0 0.0 27.04394265628904 1.9348543832304657 1.9348543832304657 18.323872065994564 0 0.2887254899964357 0.0 0.2215141619232908 0.0 {[DS]|[MA]|[CV]|TT}HMASKE;{[DS]|[MA]|[CV]|TT}HAA{M(Oxidation (M))|F}KE 4.7862;2.7579 -;- 135 + 1 2.257 53138.8 1.0 468 4397 4866 HBL1_DMSO_200M_050219_1,4867 HBL1_DMSO_200M_050219_1,4867,HAMAAAVMS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4873 22.378 800.0 80856.0 25 0 11052.0 + -1 TKAQKSMK 8 84 469.26046664184486 936.5063803504896 2 469.2602722048759 MULTI CID FTMS 0 0 0 4872 107508.1484375 0.5928096859828712 -41 0.3568973541259765 1 Oxidation (M) _TKAQKSM(Oxidation (M))K_ REV__ENST00000453612.1_1_7:43810757-43831091:+|nuORF 21.74664581756881 0.5868176546531598 3 KTT{I|L}[WP]K 7 -1 49.614 0.0 0.0 5.2977 0.0 0.0 63.99850425287918 0.0 63.99850425287918 0.0 33.41567458654217 0.0 0.0 0 0.9247425010840048 0.0 1.274227503252014 0.2887254899964357 KTT{I|L}[WP]K 5.2977 - 168 + 1 2.257 54753.2 0.5799999833106995 469 4402 4872 HBL1_DMSO_200M_050219_1,4873 HBL1_DMSO_200M_050219_1,4873,TKAQKSMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4874 22.392 800.0 31893.0 25 0 1786.1 + -1 YKCNLQYHWCK 11 34 800.3604674943987 0 800.3583862185478 PEAK CID FTMS 0 0 0 4872 57867.85546875 0.8769989175872069 2 -0.0428543090820312 2 2 Carbamidomethyl (C) _YKC(Carbamidomethyl (C))NLQYHWC(Carbamidomethyl (C))K_ REV__ENST00000582730.6_1_17:56081538-56081670:-|nuORF 0.3070304955306653 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.257 25900.7 0.4300000071525574 470 4402 4872 HBL1_DMSO_200M_050219_1,4874 HBL1_DMSO_200M_050219_1,4874,YKCNLQYHWCK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4876 22.405 593.0 321860.0 25 0 61506.0 + 37369 TKSSSIFHK 9 162 345.527129119101 1033.559557957503 3 345.5270568728447 MULTI CID FTMS 0 0 0 4875 198205.671875 0.349118026632478 -36 0.3402976989746094 1 Unmodified _TKSSSIFHK_ REV__ENSG00000119231|ENST00000323460|SENP5;REV__nc|ENSG00000119231|Q96HI0-2|SENP5 10.073929032068715 0.563993802247229 3 {I|L}P[HQ]K 5 -1 26.299 0.0 0.0 2.5445 0.0 0.0 412.1982520757397 0.0 412.1982520757397 0.0 3.9620533287528303 0.0 0.0 0 0.0 0.0 0.0 1.0356668758921828 {I|L}P[HQ]K 2.5445 - 351 + 1 2.257 163601.4 1.0 471 4403 4875 HBL1_DMSO_200M_050219_1,4876 HBL1_DMSO_200M_050219_1,4876,TKSSSIFHK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4880 22.429 800.0 37853.0 25 0 3645.0 -1 0 63 612.9426830019436 1835.8062196060305 3 612.9420654177666 MULTI CID FTMS 0 0 0 4879 29085.5 0.3147998044372981 -34 0.3161830902099609 1 3 QY 2 -1 15.217 0.0 0.0 0.82887 0.0 0.0 1142.525801493838 399.1401461236938 1541.665947617532 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 QY 0.82887 - 53 + 1 2.257 30768.1 0.4600000083446502 472 4406 4879 HBL1_DMSO_200M_050219_1,4880 HBL1_DMSO_200M_050219_1,4880, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4882 22.433 50.0 1070500.0 25 0 191890.0 16654 KELFSQHK 8 84 339.523457968154 1015.548544504662 3 339.5232726931572 MULTI CID FTMS 0 0 0 4881 1088534.0 0.5014206089640242 -31 0.3166217803955078 1 Unmodified _KELFSQHK_ ENSG00000166750|ENST00000299977|SLFN5 14.581692164780916 0.6954967302934248 3 [PS]{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}T{M(Oxidation (M))|F}K 9 7 [PS]{[QV]|[N{I|L}]|[RA]|[KV]}P + + 25.775 1.4267 0.28069 2.538 2.538 49.424 0.0 0.0 0.0 0.0 14.51582129770064 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.2396518287104437 [PS]{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}T{M(Oxidation (M))|F}K 2.538 - 73 + 1 2.257 53366.9 1.0 473 4407 4881 HBL1_DMSO_200M_050219_1,4882 HBL1_DMSO_200M_050219_1,4882,KELFSQHK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4884 22.442 367.0 110240.0 25 0 9189.9 24210 MAHSPFSAG 9 76 452.7042777727317 903.3940026122632 2 452.7041503787041 MULTI CID FTMS 0 0 0 4883 107003.4921875 0.4136972014128555 14 -0.0604496002197265 1 Unmodified _MAHSPFSAG_ ENST00000381365.3_1_17:4804421-4804538:+|nuORF 16.149105407346934 0.3995459350917656 3 {[DS]|[MA]|[CV]|TT}HM{[SA]|[TG]}KE 8 5 + 53.638 0.0 0.0 5.9374 5.9374 89.549 0.0 0.0 0.0 34.78781618382761 10.688039922107675 10.688039922107675 13.61071721255756 0 1.274227503252014 1.3979400086720375 0.2302046884880938 0.0 {[DS]|[MA]|[CV]|TT}HM{[SA]|[TG]}KE;{[DS]|[MA]|[CV]|TT}H[QP]A{[{M(Oxidation (M))|F}C]|[YS]};{[DS]|[MA]|[CV]|TT}[KT]{[CT]|[{M(Oxidation (M))|F}G]}{[{M(Oxidation (M))|F}C]|[YS]} 5.9374;4.4308;1.5951 -;-;- 103 + 1 2.257 39749.2 1.0 474 4408 4883 HBL1_DMSO_200M_050219_1,4884 HBL1_DMSO_200M_050219_1,4884,MAHSPFSAG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4890 22.463 62.0 913590.0 25 0 203850.0 + 11016 GATAWGWN 8 50 431.6952306384846 861.3759083437692 2 431.6952392458916 MULTI CID FTMS 0 0 0 4889 908362.625 0.8001324139741336 -48 0.4140911102294922 1 Unmodified _GATAWGWN_ REV__ENSG00000117643|ENST00000374332|MAN1C1;REV__ENST00000473891.1_1_1:26013020-26085338:+|nuORF;REV__MAN1C1|p.K495Pfs*21|1|0.06|ENSG00000117643|chr1:25780942-25780943|-/CT|frameshift_variant 2.577480529830294 0.808687252328423 3 DD 2 -1 20.174 0.0 0.0 2.3421 0.0 0.0 613.3115039671159 0.0 613.3115039671159 0.0 11.221516865386816 0.0 0.0 0 0.2215141619232908 0.0 0.0 0.0 DD 2.3421 - 5 1 2.257 52202.9 1.0 475 4413 4889 HBL1_DMSO_200M_050219_1,4890 HBL1_DMSO_200M_050219_1,4890,GATAWGWN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4903 22.522 800.0 59238.0 25 0 5037.7 + 6076 DSPRSSTV 8 90 424.7095033474992 847.4044537617984 2 424.7088806033134 MULTI CID FTMS 0 0 0 4902 74681.4375 0.6628872553601837 -7 0.0274925231933593 1 Unmodified _DSPRSSTV_ ENSG00000111647|ENST00000279907|BLTP3B;ENSG00000116830|ENST00000369466|TTF2 25.399314129420983 0.5099049743284904 3 TV 2 6 22.321 0.0 0.0 2.634 0.0 0.0 629.2771934852344 0.0 629.2771934852344 0.0 12.642908856817074 0.0 0.0 0 0.4247425010840047 0.0 0.25 0.0 + TV 2.634 + + 44 + 1 2.256 45935.6 0.5600000023841858 476 4425 4902 HBL1_DMSO_200M_050219_1,4903 HBL1_DMSO_200M_050219_1,4903,DSPRSSTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4905 22.533 480.0 211530.0 25 0 53455.0 7446 EGPAGVRK 8 84 407.2326085053582 812.4506640775164 2 407.2322265505791 MULTI CID FTMS 0 0 0 4904 265283.71875 0.1783239985611536 47 -0.3585376739501953 1 Unmodified _EGPAGVRK_ ENST00000523135.1_1_5:179680521-179691830:-|nuORF 23.1484247019978 0.5573009939494978 3 {[DA]|[EG]}PA 4 4 42.435 0.0 0.0 5.2231 0.0 0.0 0.0 455.2737370448663 455.2737370448663 30.21652514092061 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[DA]|[EG]}PA 5.2231 + + 25 + 1 2.256 88842.1 1.0 477 4426 4904 HBL1_DMSO_200M_050219_1,4905 HBL1_DMSO_200M_050219_1,4905,EGPAGVRK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4907 22.537 36.0 1243100.0 25 0 247950.0 42827 VVLDNSGK 8 58 416.2321863599184 830.4498197866369 2 416.2319518923759 MULTI CID FTMS 0 0 0 4906 1869769.75 0.2637659769112868 52 -0.4820194244384765 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 23.1484247019978 0.5573009939494978 3 VVSPASS[KG] 9 4 + 72.285 0.0 0.0 8.7043 8.7043 98.205 0.0 0.0 0.0 31.66218805842512 5.976774389162102 5.976774389162102 46.36069488620435 0 0.805462187404089 2.0 0.7742275032520141 0.3054621874040891 VVSPASS[KG];[PS]ASS[KG]VV;[VG]{[DA]|[EG]}S[KG]VV 8.7043;3.1217;0.78479 -;-;- 90 + 1 2.256 40852.9 1.0 478 4427 4906 HBL1_DMSO_200M_050219_1,4907 HBL1_DMSO_200M_050219_1,4907,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4908 22.551 800.0 53954.0 25 0 1454.9 -1 0 57 826.3612669641175 4126.769952487587 5 826.9637939333916 MULTI CID FTMS 0 0 0 4906 98348.296875 0.7849427407376923 6 -0.0382213592529296 2 3 SN[MN] 4 -1 12.396 0.0 0.0 0.30037 0.0 0.0 3662.590530335901 0.0 3662.590530335901 0.0 1.141303353600092 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 SN[MN] 0.30037 - 14 1 2.256 36989.3 0.3899999856948852 479 4427 4906 HBL1_DMSO_200M_050219_1,4908 HBL1_DMSO_200M_050219_1,4908, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4926 22.63 800.0 110700.0 25 0 15932.0 + -1 TKAQKSMK 8 114 469.26046664184486 936.5063803504896 2 469.2602416872978 MULTI CID FTMS 0 0 0 4925 114965.3125 0.6339291653010676 1 -0.0381393432617187 1 Oxidation (M) _TKAQKSM(Oxidation (M))K_ REV__ENST00000453612.1_1_7:43810757-43831091:+|nuORF 32.30548876998284 0.3644845974844379 3 KTT{I|L}[WP]K 7 -1 48.262 0.0 0.0 5.1534 0.0 0.0 63.998567038336496 0.0 63.998567038336496 0.0 27.971835457293963 0.0 0.0 0 1.2302046884880935 0.0 1.274227503252014 0.3252574989159953 KTT{I|L}[WP]K 5.1534 - 207 + 1 2.256 74526.5 0.75 480 4444 4925 HBL1_DMSO_200M_050219_1,4926 HBL1_DMSO_200M_050219_1,4926,TKAQKSMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4927 22.639 456.0 202910.0 25 0 14128.0 + -1 HAMAAAVMS 9 125 302.1385751833515 903.3938961502546 3 302.1382018923759 MULTI CID FTMS 0 0 0 4925 105563.828125 0.10973424376743 53 -0.6359157562255859 2 Oxidation (M) _HAMAAAVM(Oxidation (M))S_ REV__ENSG00000037757|ENST00000040663|MRI1;REV__ENST00000591688.5_1_19:13875372-13879601:+|nuORF;REV__nc|ENSG00000037757|Q9BV20-2|MRI1 5.296884461304476 0.7297726132274777 3 {[DS]|[MA]|[CV]|TT}HMA[KS]E 8 -1 + 28.935 0.0 0.0 3.2029 3.2029 82.325 0.0 0.0 0.0 15.416987135913814 4.319652862322194 4.319652862322194 21.85548345125126 0 0.2396518287104437 0.0 0.1923877696554315 0.0 {[DS]|[MA]|[CV]|TT}HMA[KS]E;{[DS]|[MA]|[CV]|TT}HMAAC{[VA]|[{I|L}G]};{[DS]|[MA]|[CV]|TT}H{[WS]|[C(Carbamidomethyl (C)){I|L}]}C{[VA]|[{I|L}G]} 3.2029;0.78362;0.066527 -;-;- 69 + 1 2.256 76906.2 1.0 481 4444 4925 HBL1_DMSO_200M_050219_1,4927 HBL1_DMSO_200M_050219_1,4927,HAMAAAVMS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4928 22.652 800.0 56286.0 25 0 2032.0 -1 0 72 925.9379801112746 1849.861407289349 2 925.9404174685478 MULTI CID FTMS 0 0 0 4925 83235.4296875 0.6793450416315143 -10 0.0393753051757812 3 3 SGGG[RD] 6 -1 49.117 0.0 0.0 2.6552 0.0 0.0 1302.6257948540883 0.0 1302.6257948540883 0.0 17.64645333192 0.0 0.0 0 1.5 0.0 0.0 1.774227503252014 SGGG[RD] 2.6552 - 1029 + 1 2.256 35876.9 0.449999988079071 482 4444 4925 HBL1_DMSO_200M_050219_1,4928 HBL1_DMSO_200M_050219_1,4928, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4930 22.658 137.0 746530.0 25 0 169240.0 + -1 IQRLETMK 8 99 345.527129119101 1033.559557957503 3 345.5266601443291 MULTI CID FTMS 0 0 0 4929 462329.5625 0.8143439235969488 6 -0.0868396759033203 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 8.745405648335112 0.7712480472641603 3 {I|L}P[HQ]K 5 -1 24.091 0.0 0.0 2.3309 0.0 0.0 412.1995233935467 0.0 412.1995233935467 0.0 7.266767150454253 0.0 0.0 0 0.0 0.0 0.0 0.6643943297944485 {I|L}P[HQ]K 2.3309 - 185 + 1 2.256 90573.8 1.0 483 4445 4929 HBL1_DMSO_200M_050219_1,4930 HBL1_DMSO_200M_050219_1,4930,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4931 22.671 800.0 31117.0 25 0 2362.8 -1 0 60 617.6281839023059 1849.8627223071176 3 617.6280395388603 MULTI CID FTMS 0 0 0 4929 80211.71875 0.6984854164441472 -11 0.0775146484375 2 3 {[SA]|[TG]}GG[RP]TSSST 11 -1 50.304 0.0 0.0 2.7194 0.0 0.0 0.0 858.3802376498919 858.3802376498919 40.70040134258431 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.4247425010840047 {[SA]|[TG]}GG[RP]TSSST 2.7194 - 313 1 2.256 25837.7 0.3700000047683716 484 4445 4929 HBL1_DMSO_200M_050219_1,4931 HBL1_DMSO_200M_050219_1,4931, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4934 22.692 800.0 43757.0 25 0 1744.5 -1 0 57 644.7946232350015 2575.149387073606 4 644.7944213747978 MULTI CID FTMS 0 0 0 -1 0 1 3 N 1 -1 6.9897 0.0 0.0 0.27143 0.0 0.0 1021.4285178060416 1436.622631403007 2458.0511492090486 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.27143 - 17 + 1 2.256 33838.9 0.449999988079071 485 4447 4933 HBL1_DMSO_200M_050219_1,4934 HBL1_DMSO_200M_050219_1,4934, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4935 22.705 800.0 56962.0 25 0 2526.6 + 1034 AGENFNVNGGQ 11 73 553.7465756388251 1105.47859834445 2 553.7466918826103 MULTI CID FTMS 0 0 0 4933 92737.8125 1.0 0 0.0 2 Unmodified _AGENFNVNGGQ_ REV__ENST00000418273.2_1_10:88730415-88730517:-|nuORF 12.240655878213236 0.7805268987462184 3 [AG]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQN 10 -1 + 43.977 0.0 0.0 3.9781 3.9781 78.892 0.0 0.0 0.0 7.048741072628651 7.048741072628651 7.048741072628651 7.048741072628651 0 0.5924778212679485 2.0 0.0 0.0 [AG]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SH;[AG]GG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQN;[AG]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAED[RN]N;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QN;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]AE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SH;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EAQQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]AED[RN]N 3.9781;3.3405;3.1491;3.1491;3.1287;3.0838;2.9009;2.5075;2.4924;2.2958 -;-;-;-;-;-;-;-;-;- 151 1 2.256 42769.3 0.5 486 4447 4933 HBL1_DMSO_200M_050219_1,4935 HBL1_DMSO_200M_050219_1,4935,AGENFNVNGGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4937 22.71 32.0 1658300.0 25 0 371460.0 16496 KALHTATFQ 9 77 339.523457968154 1015.548544504662 3 339.5232116580009 MULTI CID FTMS 0 0 0 4936 1742058.25 0.8024590031784052 10 -0.0878276824951171 1 Unmodified _KALHTATFQ_ ENSG00000092929|ENST00000207549|UNC13D;nc|ENSG00000092929|Q70J99-3|UNC13D 6.2057823575117 0.6980434486082533 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]P{I|L}T{M(Oxidation (M))|F}K 9 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]P + + 26.033 -2.5527 -0.50223 2.5634 2.5634 49.459 0.0 0.0 0.0 0.0 20.384157219675487 0.0 0.0 0 0.5 0.0 0.6421590589602533 0.2215141619232908 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]P{I|L}T{M(Oxidation (M))|F}K 2.5634 - 80 + 1 2.256 49743.9 1.0 487 4448 4936 HBL1_DMSO_200M_050219_1,4937 HBL1_DMSO_200M_050219_1,4937,KALHTATFQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4938 22.718 409.0 201090.0 25 0 22068.0 + 36006 SVQHVDAAEK 10 106 361.8527598741856 1082.536450222757 3 361.8520690798759 MULTI CID FTMS 0 0 0 4936 113248.21875 0.002096658703805 -33 0.2388687133789062 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 24.881564428377168 0.4096545554397951 3 HVDAAEK 7 3 32.815 0.0 0.0 3.0313 0.0 0.0 314.1592789151376 0.0 314.1592789151376 0.0 8.86984260976169 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.3252574989159953 + HVDAAEK 3.0313 + + 588 + 1 2.256 73864.7 1.0 488 4448 4936 HBL1_DMSO_200M_050219_1,4938 HBL1_DMSO_200M_050219_1,4938,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4939 22.732 800.0 80184.0 25 0 4923.5 -1 0 78 504.77560151225634 2015.0733001826247 4 504.7751037478447 MULTI CID FTMS 0 0 0 4936 69214.640625 0.0926483266467806 -35 0.2474575042724609 3 3 [{I|L}V]QMRA 6 -1 51.911 0.0 0.0 2.5761 0.0 0.0 0.0 1313.6353397726257 1313.6353397726257 37.93182501400722 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}V]QMRA 2.5761 - 94 + 1 2.256 59863.7 0.3400000035762787 489 4448 4936 HBL1_DMSO_200M_050219_1,4939 HBL1_DMSO_200M_050219_1,4939, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4943 22.755 800.0 91757.0 25 0 10936.0 + 36017 SVQHVDAAEK 10 56 542.275195708579 1082.5358384839578 2 542.2748901247978 MULTI CID FTMS 0 0 0 4942 71520.4921875 0.0035748327601327 -32 0.2570705413818359 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 64.68765255105646 0.0242896258970391 3 [VS]AGHVDAAEK 11 2 + 90.157 0.0 0.0 8.3283 8.3283 90.881 0.0 0.0 0.0 16.40987968217719 57.42207646182483 16.40987968217719 6.575773191777941 0 2.6237125054200234 2.0 0.0 0.0 [VS]AGHVDAAEK;[VS]QHVDAAEK;[VS]AGHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]QHVDAAA[VS];[VS]QHVD[DV]GK;[VS]AGHV{[CP]|[EA]}GEK;[VS]AGHV{[CP]|[EA]}EGK;[VS]QHV{[CP]|[EA]}GEK;[VS]QHV{[CP]|[EA]}EGK 8.3283;7.7209;7.3224;7.1076;6.7116;6.5002;6.482;6.4372;5.8745;5.8297 -;+;-;-;-;-;-;-;-;- + 967 1 2.256 69417.0 0.550000011920929 490 4451 4942 HBL1_DMSO_200M_050219_1,4943 HBL1_DMSO_200M_050219_1,4943,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4946 22.776 800.0 74416.0 25 0 5088.3 + 32659 SDANKNTV 8 120 424.7095033474992 847.4044537617984 2 424.7093994021416 MULTI CID FTMS 0 0 0 4945 71809.5546875 0.6373958537613029 21 -0.137237548828125 1 Unmodified _SDANKNTV_ REV__ENSG00000196588|ENST00000355630|MRTFA;REV__nc|ENSG00000196588|Q969V6|MRTFA 32.30548876998284 0.3644845974844379 3 TV 2 -1 31.326 0.0 0.0 3.6967 0.0 0.0 629.2809925763687 0.0 629.2809925763687 0.0 20.38364391835536 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 TV 3.6967 + + 72 1 2.256 50942.2 0.5099999904632568 491 4453 4945 HBL1_DMSO_200M_050219_1,4946 HBL1_DMSO_200M_050219_1,4946,SDANKNTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4949 22.785 130.0 424780.0 25 0 113570.0 + 4112 DAPAGRKV 8 58 407.2327788866632 812.4510048401264 2 407.2322875857353 MULTI CID FTMS 0 0 0 4948 440911.03125 0.6086108113885985 -20 0.2007007598876953 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 21.74664581756881 0.5868176546531598 3 DAPA 4 4 59.993 0.0 0.0 7.3842 0.0 0.0 0.0 455.2731938813492 455.2731938813492 56.01342204748164 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + DAPA 7.3842 + + 20 + 1 2.256 49247.2 1.0 492 4455 4948 HBL1_DMSO_200M_050219_1,4949 HBL1_DMSO_200M_050219_1,4949,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4951 22.789 115.0 368660.0 25 0 63518.0 42828 VVLDNSGK 8 63 416.2321863599184 830.4498197866369 2 416.2319824099541 MULTI CID FTMS 0 0 0 4950 502442.59375 0.070878920563513 81 -1.211660385131836 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 28.486842064014134 0.4448922141344407 3 VVSPASSGK 9 4 + 63.584 0.0 0.0 7.6566 7.6566 95.077 0.0 0.0 0.0 46.76908324292192 10.334778045573074 10.334778045573074 17.447274948966935 0 0.7742275032520141 2.0 0.4247425010840047 0.3054621874040891 VVSPASSGK;VVSE{[NV]|[RG]}GK 7.6566;5.5556 -;- 90 + 1 2.256 37614.7 1.0 493 4456 4950 HBL1_DMSO_200M_050219_1,4951 HBL1_DMSO_200M_050219_1,4951,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4954 22.799 171.0 143730.0 25 0 8733.6 -1 0 50 404.0222368456053 2015.0748018950264 5 404.2227661013603 MULTI CID FTMS 0 0 0 4953 194433.296875 0.2515944363673507 -19 0.1987762451171875 1 3 [{I|L}V]QM 4 -1 38.188 0.0 0.0 1.8951 0.0 0.0 0.0 1540.76354618879 1540.76354618879 25.08864383480216 0.0 0.0 0.0 0 0.0 2.0 0.0 0.5 [{I|L}V]QM 1.8951 - 29 + 1 2.256 31847.2 1.0 494 4458 4953 HBL1_DMSO_200M_050219_1,4954 HBL1_DMSO_200M_050219_1,4954, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4966 22.843 65.0 1164000.0 25 0 234780.0 11028 GAWSAHAY 8 73 431.6952306384846 861.3759083437692 2 431.6953002810478 MULTI CID FTMS 0 0 0 4965 1070063.0 0.9425664021506864 8 -0.143930435180664 1 Unmodified _GAWSAHAY_ ENST00000367334.9_1_1:201104135-201104420:-|nuORF 2.577480529830294 0.808687252328423 3 DD{I|L} 3 8 27.435 0.0 0.0 3.185 0.0 0.0 0.0 515.2212008111936 515.2212008111936 10.445312593723983 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DD{I|L} 3.185 - 10 + 1 2.256 64024.5 1.0 495 4469 4965 HBL1_DMSO_200M_050219_1,4966 HBL1_DMSO_200M_050219_1,4966,GAWSAHAY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4967 22.857 800.0 16552.0 25 0 3646.3 -1 0 32 687.3126471737145 3431.526853535572 5 687.5124389529228 MULTI CID FTMS 0 0 0 4965 31477.365234375 0.3499189666007433 -5 0.0196857452392578 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.256 18292.6 0.4699999988079071 496 4469 4965 HBL1_DMSO_200M_050219_1,4967 HBL1_DMSO_200M_050219_1,4967, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4971 22.881 800.0 90673.0 25 0 10241.0 -1 ADGSMDVVVCT 11 107 577.2469911549877 1152.4794293767752 2 577.2477905154228 MULTI CID FTMS 0 0 0 4970 68478.671875 0.1510378782714589 -31 0.2619762420654297 1 Carbamidomethyl (C) _ADGSMDVVVC(Carbamidomethyl (C))T_ ENSG00000170439|ENST00000394252|METTL7B 11.494710602746466 0.7960433852372589 3 [AG]N[HN]EAQ 8 -1 26.666 0.0 0.0 2.3138 0.0 0.0 0.0 328.1271448861449 328.1271448861449 14.504432651052385 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.2742275032520141 [AG]N[HN]EAQ 2.3138 - 174 1 2.256 60050.7 0.5899999737739563 497 4472 4970 HBL1_DMSO_200M_050219_1,4971 HBL1_DMSO_200M_050219_1,4971,ADGSMDVVVCT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4973 22.897 800.0 139310.0 25 0 19959.0 + -1 TKAQKSMK 8 111 469.26046664184486 936.5063803504896 2 469.2601806521416 MULTI CID FTMS 0 0 0 4972 155308.75 0.8563865405180557 30 -0.4245719909667969 1 Oxidation (M) _TKAQKSM(Oxidation (M))K_ REV__ENST00000453612.1_1_7:43810757-43831091:+|nuORF 21.74664581756881 0.5868176546531598 3 KTT{I|L}[WP]K 7 -1 48.25 0.0 0.0 5.1521 0.0 0.0 63.99834296316062 0.0 63.99834296316062 0.0 31.39534430471943 0.0 0.0 0 0.8807196863200843 0.0 1.3494850021680094 0.3252574989159953 KTT{I|L}[WP]K 5.1521 - 423 + 1 2.256 90756.4 0.6000000238418579 498 4473 4972 HBL1_DMSO_200M_050219_1,4973 HBL1_DMSO_200M_050219_1,4973,TKAQKSMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4976 22.917 800.0 55311.0 25 0 2116.9 + 25505 NEMIEQIWD 9 84 589.2640654229674 0 589.2635375857353 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _NEMIEQIWD_ REV__ENSG00000213022|ENST00000594211|KLK9 10.073929032068715 0.3114232490637051 3 QAED 4 -1 14.157 0.0 0.0 1.2033 0.0 0.0 331.1459247254033 399.1782625787719 730.3241873041752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QAED 1.2033 - 71 + 1 2.256 39851.6 0.5699999928474426 499 4475 4975 HBL1_DMSO_200M_050219_1,4976 HBL1_DMSO_200M_050219_1,4976,NEMIEQIWD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4977 22.93 800.0 37864.0 25 0 2175.1 -1 0 58 703.0614199075513 2808.216573763805 4 703.3123657107353 MULTI CID FTMS 0 0 0 4975 73391.4140625 0.7806958123857048 -2 0.0198192596435546 2 3 M[RD] 3 -1 8.072 0.0 0.0 0.28744 0.0 0.0 2388.0771263641545 0.0 2388.0771263641545 0.0 2.5874185669681555 0.0 0.0 0 0.0 0.0 0.0 0.0 M[RD] 0.28744 - 32 1 2.256 28973.7 0.5199999809265137 500 4475 4975 HBL1_DMSO_200M_050219_1,4977 HBL1_DMSO_200M_050219_1,4977, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4979 22.948 800.0 173150.0 25 0 22317.0 + 14332 IEQRTLQF 8 162 345.527129119101 1033.559557957503 3 345.5270263552666 MULTI CID FTMS 0 0 0 4978 64692.5625 0.1139490083414054 37 -0.5552902221679688 1 Unmodified _IEQRTLQF_ REV__ENSG00000086619|ENST00000354619|ERO1B 8.593279151180031 0.7721714526254883 3 [VG]HT{I|L} 5 -1 23.204 0.0 0.0 2.2451 0.0 0.0 0.0 523.2624931402087 523.2624931402087 7.801752842871084 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.0 [VG]HT{I|L} 2.2451 - 256 1 2.245 116372.1 0.449999988079071 501 4476 4978 HBL1_DMSO_200M_050219_1,4979 HBL1_DMSO_200M_050219_1,4979,IEQRTLQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4980 22.955 394.0 105510.0 25 0 4616.9 + -1 MGYFCMAEK 9 88 568.7315353638594 1135.4485177945187 2 568.7307617068291 MULTI CID FTMS 0 0 0 4978 111943.140625 0.327343591653689 -9 0.0999584197998046 2 Carbamidomethyl (C) _MGYFC(Carbamidomethyl (C))MAEK_ REV__ENST00000607690.1_1_2:190531048-190531108:+|nuORF 10.073929032068715 0.563993802247229 3 VDAAEK 6 -1 37.925 0.0 0.0 3.3401 0.0 0.0 504.1293133359282 0.0 504.1293133359282 0.0 24.11236583892361 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.2742275032520141 VDAAEK 3.3401 - 64 + 1 2.245 37224.1 1.0 502 4476 4978 HBL1_DMSO_200M_050219_1,4980 HBL1_DMSO_200M_050219_1,4980,MGYFCMAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4981 22.969 800.0 486800.0 25 0 37206.0 + 40353 VHQEAGEK 8 179 449.2248150896834 896.4350772461669 2 449.2245666384697 MULTI CID FTMS 0 0 0 4978 112238.6640625 0.2652684149364746 -7 0.0919837951660156 3 Unmodified _VHQEAGEK_ REV__nc|ENSG00000112425|B3EWF7|EPM2A 85.27202061508552 0.0687763219216887 3 [AG]HVDAAEK 9 -1 + 87.637 0.0 0.0 9.7762 9.7762 89.374 0.0 0.0 0.0 56.44329145051562 23.172626582051564 23.172626582051564 3.979400086720375 0 1.6025684359364405 1.0457574905606752 1.1886218330464624 0.6694451763165201 [AG]HVDAAEK;[AG]HVADAEK;[AG]HVDAAKE;[AG]HVADAKE;[HQ]VEGAEK;[HV]QEGAEK;[VG]EHQAEK;[HQ]VEQEK;[AG]HVEQEK;[AG]HVEGAEK 9.7762;9.3323;7.1465;6.7025;6.2976;5.6786;5.4197;5.0292;4.8071;4.7599 -;-;-;-;-;-;-;-;-;- 1926 + 1 2.245 296676.8 0.4600000083446502 503 4476 4978 HBL1_DMSO_200M_050219_1,4981 HBL1_DMSO_200M_050219_1,4981,VHQEAGEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4982 22.982 800.0 62304.0 25 0 4121.1 -1 0 58 672.6982545953397 2015.072934386219 3 672.6985351443291 MULTI CID FTMS 0 0 0 4978 97112.125 1.0 0 0.0 4 3 [{I|L}V]QMR 5 -1 51.026 0.0 0.0 2.5322 0.0 0.0 0.0 1384.6832258826903 1384.6832258826903 35.541134294324124 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 [{I|L}V]QMR 2.5322 - 57 + 1 2.245 50242.1 0.4099999964237213 504 4476 4978 HBL1_DMSO_200M_050219_1,4982 HBL1_DMSO_200M_050219_1,4982, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4984 22.987 1.8 36573000.0 25 0 6029500.0 + 36007 SVQHVDAAEK 10 80 361.8527598741856 1082.536450222757 3 361.8526183962822 MULTI CID FTMS 0 0 0 4983 36374004.0 0.6734222658918306 -4 0.101633071899414 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 3 AA[TA]HVDAAEK 11 4 + 48.052 0.0 0.0 4.4388 4.4388 75.492 0.0 0.0 0.0 4.515228367446689 15.115618994235682 4.515228367446689 3.0102999566398125 0 0.0 0.0 0.3807196863200844 0.3054621874040891 AA[TA]HVDAAEK;AA[TA]HVADAEK;[VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T][KG];[VS]AG{M(Oxidation (M))|F}AA[Y{I|L}][KG];[WK]HVA{[CT]|[{M(Oxidation (M))|F}G]}A[PA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T][KG];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AA[Y{I|L}][KG];{[DA]|[EG]}K{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T][KG] 4.4388;4.1607;3.0425;2.6018;1.4654;1.1437;0.70296;0.40981 -;-;-;-;-;-;-;- 518 + 1 2.245 58041.5 1.0 505 4477 4983 HBL1_DMSO_200M_050219_1,4984 HBL1_DMSO_200M_050219_1,4984,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4985 22.988 60.0 405490.0 25 0 40142.0 -1 0 37 504.77560151225634 2015.0733001826247 4 504.7758972048759 MULTI CID FTMS 0 0 0 4983 513462.875 0.6873036648667145 -6 0.12164306640625 2 3 [{I|L}V]QMR 5 -1 43.456 0.0 0.0 2.1565 0.0 0.0 0.0 1384.675978883135 1384.675978883135 27.257724967479856 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}V]QMR 2.1565 - 32 + 1 2.245 32293.1 1.0 506 4477 4983 HBL1_DMSO_200M_050219_1,4985 HBL1_DMSO_200M_050219_1,4985, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 4987 23.004 800.0 184440.0 25 0 14588.0 + 30440 RDSFSAEK 8 126 470.2302577042992 938.4459624753983 2 470.2303344607353 MULTI CID FTMS 0 0 0 4986 276817.125 0.2960603244416676 -27 0.2486820220947265 1 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 34.40172386719151 0.3279500639400574 3 HVDAAEK 7 -1 73.467 0.0 0.0 7.8285 0.0 0.0 170.06854982932254 0.0 170.06854982932254 0.0 31.22441044645392 0.0 0.0 0 2.9291746928241125 0.0 0.4247425010840047 0.3252574989159953 HVDAAEK 7.8285 - 524 + 1 2.245 116477.8 0.7400000095367432 507 4478 4986 HBL1_DMSO_200M_050219_1,4987 HBL1_DMSO_200M_050219_1,4987,RDSFSAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4988 23.008 215.0 395830.0 25 0 48269.0 + 37480 TLFKDKHQ 8 103 339.523457968154 1015.548544504662 3 339.5230895876884 MULTI CID FTMS 0 0 0 4986 270751.125 0.1247183771707586 40 -0.604644775390625 2 Unmodified _TLFKDKHQ_ REV__ENSG00000160606|ENST00000292090|TLCD1;REV__nc|ENSG00000160606|Q96CP7-2|TLCD1 5.230669730166228 0.792582437072536 3 K 1 -1 13.245 0.0 0.0 1.3043 0.0 0.0 869.4426007564183 0.0 869.4426007564183 0.0 4.393784467040094 0.0 0.0 0 0.0 0.0 0.0 0.1462566630072955 K 1.3043 + + 78 + 1 2.245 73669.8 1.0 508 4478 4986 HBL1_DMSO_200M_050219_1,4988 HBL1_DMSO_200M_050219_1,4988,TLFKDKHQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4989 23.015 392.0 242600.0 25 0 11277.0 + 45709 YYDLYGGEK 9 120 554.2534979059981 1106.492442878796 2 554.2532226443291 MULTI CID FTMS 0 0 0 4986 237242.28125 0.5863126753077489 -2 0.0577335357666015 3 Unmodified _YYDLYGGEK_ ENSG00000179295|ENST00000351677|PTPN11;nc|ENSG00000179295|Q06124-1|PTPN11;nc|ENSG00000179295|Q06124-3|PTPN11 37.97399986684836 0.0865783450051559 3 [VS]{[MG]|[TS]}DPCAAEK 11 8 + 64.971 0.0 0.0 5.8718 5.8718 78.467 0.0 0.0 0.0 1.8191743835382184 1.8191743835382184 1.8191743835382184 1.8191743835382184 0 1.8494850021680087 1.3979400086720375 0.75 0.3807196863200844 [VS]{[MG]|[TS]}DPCAAEK;[VS]A[DC][DV]AAEK;[VS]A[CS][DP]TAEK;[VS]AG{[WS]|[C(Carbamidomethyl (C)){I|L}]}DEEK;[VS]A[DC][PS]TAEK;[VS]{[C(Carbamidomethyl (C))E]|[WC]}[DV]AAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHCYNEK;[VS][WP][C(Carbamidomethyl (C))M]AEK;[VS][WP]V[C(Carbamidomethyl (C))C]EK;[VS]QHVC(Carbamidomethyl (C))[PG]SH 5.8718;5.7074;4.9991;4.9034;4.7795;4.7691;4.6681;4.3944;4.3355;4.2772 -;-;-;-;-;-;-;-;-;- 3593 + 1 2.245 75218.5 1.0 509 4478 4986 HBL1_DMSO_200M_050219_1,4989 HBL1_DMSO_200M_050219_1,4989,YYDLYGGEK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4991 23.02 4.3 12288000.0 25 0 951650.0 + 36018 SVQHVDAAEK 10 85 542.275195708579 1082.5358384839578 2 542.2754394412041 MULTI CID FTMS 0 0 0 4990 15982007.0 0.7988340187381527 -4 0.114572525024414 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 3 [VS]QHVDAAEK 10 0 + 106.16 0.0 0.0 9.8063 9.8063 93.697 0.0 0.0 0.0 88.19775651841368 16.576447055154517 16.576447055154517 8.57840941039747 0 2.7971062485323515 2.0 0.8807196863200843 0.805462187404089 + + [VS]QHVDAAEK;[VS]QHVADAEK;[VS][AG]HVDAAEK;[VS][AG]HVADAEK;[VS]AGHVDAAA[VS];[VS]QHVDAAA[VS];[VS]Q{M(Oxidation (M))|F}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]AGHVD[DV][KG];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAA[VS];[VS]AGHVD{[NV]|[RG]}[VS] 9.8063;9.0138;8.9597;8.1673;7.6456;6.7344;6.0086;5.9032;5.4666;5.4624 +;-;-;-;-;-;-;-;-;- + 834 + 1 2.225 46843.7 1.0 510 4479 4990 HBL1_DMSO_200M_050219_1,4991 HBL1_DMSO_200M_050219_1,4991,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 4992 23.033 800.0 94681.0 25 0 3379.1 8359 ESAYENKSL 9 132 347.501341584083 1039.482195352449 3 347.5009338259697 MULTI CID FTMS 0 0 0 4990 58544.3125 0.4476099871690272 -10 0.1766891479492187 2 Unmodified _ESAYENKSL_ ENSG00000130844|ENST00000449416|ZNF331 10.799506525563784 0.5443532743200366 3 QS{I|L} 3 7 20.283 0.0 0.0 1.9513 0.0 0.0 693.2919435147834 0.0 693.2919435147834 0.0 3.1965775471243703 0.0 0.0 0 0.0 0.0 0.6382104921644451 0.0 QS{I|L} 1.9513 - 66 + 1 2.225 65070.9 0.4300000071525574 511 4479 4990 HBL1_DMSO_200M_050219_1,4992 HBL1_DMSO_200M_050219_1,4992,ESAYENKSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4993 23.047 800.0 118600.0 25 0 12182.0 + -1 WHSCMKEK 8 94 561.2493751336839 1120.4841973341677 2 561.2497436404228 MULTI CID FTMS 0 0 0 4990 105023.078125 0.6662863787263443 -4 0.114572525024414 3 Carbamidomethyl (C),Oxidation (M) _WHSC(Carbamidomethyl (C))M(Oxidation (M))KEK_ REV__nc|ENSG00000127328|Q96QF0-5|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-6|RAB3IP 36.12702656103203 0.299085846329477 3 KE{[{M(Oxidation (M))|F}D]|MM}YYEK 8 -1 + 51.164 0.0 0.0 4.5662 4.5662 84.475 0.0 0.0 0.0 16.40978057358332 12.102286636468946 12.102286636468946 12.102286636468946 0 1.7302046884880935 0.0 1.3494850021680094 0.2742275032520141 KE{[{M(Oxidation (M))|F}D]|MM}YYEK;KE{[{M(Oxidation (M))|F}D]|MM}YYKE;KE{[{M(Oxidation (M))|F}D]|MM}[QP]QTE;KE{[{M(Oxidation (M))|F}D]|MM}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[Y{M(Oxidation (M))|F}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))Q][DN]AEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ][YC(Carbamidomethyl (C))]EK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))Q][DN]ATR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ][YC(Carbamidomethyl (C))]TR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))Q][DN]AA[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ][YC(Carbamidomethyl (C))]A[VS] 4.5662;3.4861;2.9703;2.6048;2.3287;1.7505;1.5693;0.99117;0.90468;0.32171 -;-;-;-;-;-;-;-;-;- 197 + 1 2.225 75665.9 0.5 512 4479 4990 HBL1_DMSO_200M_050219_1,4993 HBL1_DMSO_200M_050219_1,4993,WHSCMKEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4994 23.061 800.0 55211.0 25 0 5336.7 + -1 RLVRRVCERWL 11 34 771.9428808474986 0 771.9443237185478 PEAK CID FTMS 0 0 0 4990 51106.76953125 0.6718916903035601 -5 0.1182785034179687 4 Carbamidomethyl (C) _RLVRRVC(Carbamidomethyl (C))ERWL_ REV__ENSG00000167196|ENST00000308275|FBXO22;REV__ENST00000565131.5_1_15:76196304-76197948:+|nuORF;REV__nc|ENSG00000167196|Q8NEZ5-3|FBXO22 0.2690200627634905 0.4761840153648598 3 Q 1 -1 2.7642 0.0 0.0 0.17928 0.0 0.0 847.5850892323034 563.2077120416624 1410.7928012739658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.17928 - 2 + 1 2.225 39670.7 0.3700000047683716 513 4479 4990 HBL1_DMSO_200M_050219_1,4994 HBL1_DMSO_200M_050219_1,4994,RLVRRVCERWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 4996 23.065 67.0 445730.0 25 0 22462.0 + -1 LKLGGQPTEQH 11 67 404.0222368456053 2015.0748018950264 5 404.0221130251884 MULTI CID FTMS 0 0 0 4995 672949.6875 0.8819181548578297 -1 0.0457324981689453 1 ENSG00000187527|ENST00000342358|ATP13A5 3 K 1 -1 13.979 0.0 0.0 0.69374 0.0 0.0 1868.9690717698293 0.0 1868.9690717698293 0.0 -5.228787452803374 -5.228787452803374 0.0 0 0.0 0.0 0.0 0.0 K 0.69374 - 55 + 1 2.225 41074.0 1.0 514 4480 4995 HBL1_DMSO_200M_050219_1,4996 HBL1_DMSO_200M_050219_1,4996, False False LKLGGQPTEQH 23.065235 404.022113025188 337489.03125 4995.0 ENSG00000187527|ENST00000342358|ATP13A5 1.576953907807668 3.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4997 23.074 467.0 141990.0 25 0 17939.0 42829 VVLDNSGK 8 99 416.2321863599184 830.4498197866369 2 416.2323791384697 MULTI CID FTMS 0 0 0 4995 128024.3984375 0.0180602347012764 105 -1.714885711669922 2 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 15.847184025352805 0.6768015514314958 3 VVSPASSGK 9 4 + 53.482 0.0 0.0 6.4401 6.4401 90.406 0.0 0.0 0.0 18.075849016662687 11.012670281914666 11.012670281914666 10.969100130080562 0 0.805462187404089 2.0 0.0 0.3646051890133548 VVSPASSGK;VVSE{[NV]|[RG]}GK;VVSE{[QN]|[E{I|L}]|[KN]}R 6.4401;5.1193;5.114 -;-;- 132 + 1 2.225 58031.3 1.0 515 4480 4995 HBL1_DMSO_200M_050219_1,4997 HBL1_DMSO_200M_050219_1,4997,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 4999 23.092 800.0 39553.0 25 0 3440.8 -1 PHKCDMCDK 9 68 603.7397949099541 0 603.7397949099541 PEAK CID FTMS 0 0 0 -1 0 1 2 Carbamidomethyl (C),Oxidation (M) _PHKC(Carbamidomethyl (C))DM(Oxidation (M))C(Carbamidomethyl (C))DK_ ENSG00000005889|ENST00000304543|ZFX;nc|ENSG00000005889|P17010-2|ZFX;nc|ENSG00000005889|P17010-3|ZFX 1.844237919475145 0.3444685223463735 3 E 1 -1 6.9897 0.0 0.0 0.57983 0.0 0.0 244.0696033923705 829.3225802057249 1073.3921835980957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.57983 - 34 + 1 2.225 29554.9 0.5199999809265137 516 4481 4998 HBL1_DMSO_200M_050219_1,4999 HBL1_DMSO_200M_050219_1,4999,PHKCDMCDK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5001 23.106 536.0 78419.0 25 0 4277.1 34970 SQLFFFHL 8 96 346.8526828062708 0 346.8521606326103 PEAK CID FTMS 0 0 0 5000 151049.328125 0.9896294820647796 -2 0.0309123992919921 1 Unmodified _SQLFFFHL_ ENSG00000159961|ENST00000641141|OR3A3;ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000159961|P47888|OR3A3;nc|ENSG00000221882|P47893|OR3A2 12.531546534597751 0.5131024102181418 3 {I|L} 1 7 4.6041 0.0 0.0 0.66563 0.0 0.0 363.5153193705509 212.06862817935783 575.5839475499088 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.66563 + + 4 + 1 2.202 37099.9 1.0 517 4482 5000 HBL1_DMSO_200M_050219_1,5001 HBL1_DMSO_200M_050219_1,5001,SQLFFFHL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5003 23.124 800.0 42218.0 25 0 4845.6 + -1 EEMCYEDDK 9 71 617.7151075095767 0 617.7152587771416 PEAK CID FTMS 0 0 0 5002 92788.59375 1.0 0 0.0 1 Carbamidomethyl (C),Oxidation (M) _EEM(Oxidation (M))C(Carbamidomethyl (C))YEDDK_ REV__ENSG00000109927|ENST00000392793|TECTA 2.059750862983233 0.3444685223463734 3 E 1 -1 6.5938 0.0 0.0 0.5346 0.0 0.0 958.2666580349752 143.08289514713127 1101.3495531821063 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E 0.5346 + + 13 + 1 2.202 33830.8 0.5099999904632568 518 4483 5002 HBL1_DMSO_200M_050219_1,5003 HBL1_DMSO_200M_050219_1,5003,EEMCYEDDK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5004 23.138 800.0 58175.0 25 0 4621.7 -1 0 46 746.129852891358 0 746.1295043826103 PEAK CID FTMS 0 0 0 5002 86145.2578125 1.0 0 0.0 2 3 D 1 -1 7.6587 0.0 0.0 0.51392 0.0 0.0 629.8727296090848 742.3034762018186 1372.1762058109034 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 D 0.51392 - 7 + 1 2.202 41535.0 0.4799999892711639 519 4483 5002 HBL1_DMSO_200M_050219_1,5004 HBL1_DMSO_200M_050219_1,5004, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5006 23.145 276.0 218970.0 25 0 17036.0 -1 DQVTDMMIAN 10 91 577.2469911549877 1152.4794293767752 2 577.2474853396416 MULTI CID FTMS 0 0 0 5005 358258.65625 0.7901821958690544 -19 0.3153057098388672 1 Oxidation (M) _DQVTDM(Oxidation (M))MIAN_ ENSG00000124171|ENST00000371610|PARD6B;ENSG00000178184|ENST00000353265|PARD6G 17.11289562659939 0.5604042439455784 3 [AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQ{[QG]|[NA]} 11 -1 + 51.814 0.0 0.0 4.4959 4.4959 81.902 0.0 0.0 0.0 5.528198119064776 31.35914466418237 5.528198119064776 9.128498242810998 0 0.5 1.6989700043360187 0.805462187404089 0.0 [AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQ{[QG]|[NA]};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EA[AG]Q{[QG]|[NA]};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQ[AG]{[QG]|[NA]};[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQ{[QG]|[NA]};[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EA[AG]Q{[QG]|[NA]};[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQ[AG]{[QG]|[NA]} 4.4959;3.7038;3.7038;3.1844;2.3892;2.3892 -;-;-;-;-;- 176 1 2.202 50288.2 1.0 520 4484 5005 HBL1_DMSO_200M_050219_1,5006 HBL1_DMSO_200M_050219_1,5006,DQVTDMMIAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5008 23.155 261.0 239130.0 25 0 53270.0 7447 EGPAGVRK 8 74 407.2327788866632 812.4510048401264 2 407.2334777712822 MULTI CID FTMS 0 0 0 5007 200004.078125 0.2760752978295661 10 -0.0945415496826171 1 Unmodified _EGPAGVRK_ ENST00000523135.1_1_5:179680521-179691830:-|nuORF 12.531546534597751 0.7257836412119636 3 {[DA]|[EG]}PA 4 4 40.445 0.0 0.0 4.9782 0.0 0.0 0.0 455.27292810611567 455.27292810611567 30.445312593723983 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[DA]|[EG]}PA 4.9782 + + 20 + 1 2.202 54865.7 1.0 521 4485 5007 HBL1_DMSO_200M_050219_1,5008 HBL1_DMSO_200M_050219_1,5008,EGPAGVRK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5010 23.173 800.0 75053.0 25 0 7022.1 + -1 DQRYWSMYGHN 11 97 491.53981613332417 1471.5976190001725 3 491.5399352908134 MULTI CID FTMS 0 0 0 5009 107933.09375 0.6201085683148212 -4 0.0627899169921875 1 Oxidation (M) _DQRYWSM(Oxidation (M))YGHN_ REV__nc|ENSG00000253534|A0A0A6YYG3|TRBV6-8 2.6312355333042263 0.8627335947654684 3 HSWSHHHE 8 -1 41.605 0.0 0.0 2.8272 0.0 0.0 416.1628937586582 0.0 416.1628937586582 0.0 20.63608784304506 0.0 0.0 0 0.0 0.0 0.25 0.0 HSWSHHHE 2.8272 - 449 + 1 2.202 55262.9 0.550000011920929 522 4486 5009 HBL1_DMSO_200M_050219_1,5010 HBL1_DMSO_200M_050219_1,5010,DQRYWSMYGHN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5012 23.192 800.0 237200.0 25 0 11827.0 42155 VSAMDKDDPK 10 154 553.265108915442 1104.515664897684 2 553.2659179568291 MULTI CID FTMS 0 0 0 5011 226655.9375 1.0 0 0.0 1 Unmodified _VSAMDKDDPK_ ENSG00000150394|ENST00000577390|CDH8 34.40172386719151 0.2166836008404837 3 SVQHCVHGE 9 9 82.464 0.0 0.0 7.4661 0.0 0.0 0.0 125.07253442935782 125.07253442935782 21.63318140560776 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.7302046884880937 0.4247425010840047 SVQHCVHGE 7.4661 - 14458 + 1 2.18 145556.5 0.7900000214576721 523 4487 5011 HBL1_DMSO_200M_050219_1,5012 HBL1_DMSO_200M_050219_1,5012,VSAMDKDDPK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5015 23.2 138.0 187750.0 25 0 8999.5 + -1 MGYFCMAEK 9 60 568.7315353638594 1135.4485177945187 2 568.7308837771416 MULTI CID FTMS 0 0 0 5014 247807.90625 0.7246386837027841 4 -0.0363311767578125 1 Carbamidomethyl (C) _MGYFC(Carbamidomethyl (C))MAEK_ REV__ENST00000607690.1_1_2:190531048-190531108:+|nuORF 10.073929032068715 0.563993802247229 3 AAEK 4 -1 27.273 0.0 0.0 2.4019 0.0 0.0 718.2251118880719 0.0 718.2251118880719 0.0 20.28303006573223 0.0 0.0 0 0.0 0.0 0.5 0.2887254899964357 AAEK 2.4019 - 27 + 1 2.18 26899.9 1.0 524 4489 5014 HBL1_DMSO_200M_050219_1,5015 HBL1_DMSO_200M_050219_1,5015,MGYFCMAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5016 23.214 800.0 119680.0 25 0 8913.4 + 39984 VGAVKANK 8 113 393.7451840919564 785.4758152507128 2 393.7451354861259 MULTI CID FTMS 0 0 0 5014 94204.328125 0.5889465454560019 5 -0.0400352478027343 2 Unmodified _VGAVKANK_ REV__ENSG00000184058|ENST00000649276|TBX1;REV__nc|ENSG00000184058|O43435-2|TBX1;REV__nc|ENSG00000184058|O43435-3|TBX1;REV__nc|ENSG00000184058|O43435|TBX1 9.347437153973935 0.7675937258251505 3 P{I|L}K 3 -1 28.232 0.0 0.0 3.5942 0.0 0.0 429.2341856291127 0.0 429.2341856291127 0.0 16.8119262618192 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 P{I|L}K 3.5942 - 73 1 2.18 80134.0 0.7699999809265137 525 4489 5014 HBL1_DMSO_200M_050219_1,5016 HBL1_DMSO_200M_050219_1,5016,VGAVKANK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5018 23.224 441.0 628580.0 25 0 52492.0 + + 40354 QHVDAAEK 8 145 449.2248150896834 896.4350772461669 2 449.2258788943291 MULTI CID FTMS 0 0 0 5017 257617.34375 0.6088609928451537 7 -0.0364532470703125 1 Unmodified _VHQEAGEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 71.13359017698441 0.1103988542940256 3 [AG]HVDAAEK 9 -1 + 80.83 0.0 0.0 9.0168 9.0168 90.738 0.0 0.0 0.0 53.86101380939489 22.899765408488896 22.899765408488896 5.6246936830415 0 1.0030834337684311 0.958607314841775 1.2218487496163564 0.6421590589602533 [AG]HVDAAEK;[AG]HVADAEK;[AG][RP][HC]EK 9.0168;8.3894;2.8773 -;-;- 1064 + 1 2.18 214549.0 1.0 526 4490 5017 HBL1_DMSO_200M_050219_1,5018 HBL1_DMSO_200M_050219_1,5018,VHQEAGEK False False QHVDAAEK 23.223916 449.225878894329 5189378.5 5017.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 5.563553969065349 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5023 23.24 1.2 34386000.0 25 0 5477600.0 + 36008 SVQHVDAAEK 10 67 361.8527598741856 1082.536450222757 3 361.8527099490166 MULTI CID FTMS 0 0 0 5022 34448588.0 0.6377754340086983 13 -0.1209964752197265 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 27.22323531849824 0.3570408936368626 3 [VS]AG{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK 11 6 + 38.804 0.0 0.0 3.5846 3.5846 74.017 0.0 0.0 0.0 9.03022600654286 17.377754544423752 9.03022600654286 3.5211513177370506 0 0.6365006360318688 2.0 0.0 0.0 [VS]AG{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK;[VS][{M(Oxidation (M))|F}E]AAQ{M(Oxidation (M))|F}GK;[VS]A[{M(Oxidation (M))|F}E]AQ{M(Oxidation (M))|F}GK;[VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;[VS][{M(Oxidation (M))|F}E]AA[AG]{M(Oxidation (M))|F}GK;[VS]AG{M(Oxidation (M))|F}AA[Y{I|L}]GK;[VS]A[{M(Oxidation (M))|F}E]A[AG]{M(Oxidation (M))|F}GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK;[WK]HVA{[CT]|[{M(Oxidation (M))|F}G]}A[PA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}E]AQ{M(Oxidation (M))|F}GK 3.5846;3.2593;3.0544;2.8494;2.4127;2.4086;2.2078;1.6858;1.2605;1.1596 -;-;-;-;-;-;-;-;-;- 337 1 2.18 42671.7 1.0 527 4494 5022 HBL1_DMSO_200M_050219_1,5023 HBL1_DMSO_200M_050219_1,5023,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5025 23.244 105.0 629260.0 25 0 54671.0 + 30441 RDSFSAEK 8 77 470.2302577042992 938.4459624753983 2 470.2302123904228 MULTI CID FTMS 0 0 0 5024 788806.0 0.8436405814182704 -10 0.0945415496826171 1 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 24.020572477871973 0.5389365498350341 3 HVDAAEK 7 -1 72.229 0.0 0.0 7.6967 0.0 0.0 170.06827801668993 0.0 170.06827801668993 0.0 38.5842668284527 0.0 0.0 0 2.504432191740108 0.0 0.4247425010840047 0.3252574989159953 HVDAAEK 7.6967 - 282 + 1 2.18 56656.0 1.0 528 4495 5024 HBL1_DMSO_200M_050219_1,5025 HBL1_DMSO_200M_050219_1,5025,RDSFSAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5026 23.247 121.0 344980.0 25 0 27249.0 -1 0 61 504.77560151225634 2015.0733001826247 4 505.0265075564384 MULTI CID FTMS 0 0 0 5024 468925.46875 0.6290795741936771 17 -0.2421436309814453 2 3 [{I|L}V]QM 4 -1 42.435 0.0 0.0 2.1059 0.0 0.0 0.0 1540.7610329229626 1540.7610329229626 26.95046257204389 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.5 [{I|L}V]QM 2.1059 - 46 + 1 2.18 46514.8 1.0 529 4495 5024 HBL1_DMSO_200M_050219_1,5026 HBL1_DMSO_200M_050219_1,5026, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5030 23.27 800.0 47069.0 25 0 3524.2 -1 0 80 581.2594529726942 1740.7565295182826 3 581.2621948122978 MULTI CID FTMS 0 0 0 5029 97806.265625 0.3451040996239007 -10 0.0628604888916015 1 3 QGSY 4 -1 25.926 0.0 0.0 1.4894 0.0 0.0 893.4076658481639 409.1500338190063 1302.5576996671705 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0994850021680094 0.5 QGSY 1.4894 - 199 + 1 2.166 38586.1 0.7300000190734863 530 4498 5029 HBL1_DMSO_200M_050219_1,5030 HBL1_DMSO_200M_050219_1,5030, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5032 23.275 6.0 7708200.0 25 0 686040.0 + 36019 SVQHVDAAEK 10 76 542.275195708579 1082.5358384839578 2 542.2753784060478 MULTI CID FTMS 0 0 0 5031 9903313.0 0.4950006167943607 16 -0.2543258666992187 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 59.17704102725264 0.0387449460849098 3 [VS]QHVDAAEK 10 0 + 99.991 0.0 0.0 9.2367 9.2367 93.943 0.0 0.0 0.0 82.03192854104806 16.576447055154517 16.576447055154517 9.164539485499247 0 2.385151878060192 2.0 0.5 0.805462187404089 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS][AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AWVHGA[PA];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AWVHQ[PA];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DAAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T][KG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK 9.2367;8.3901;5.9486;5.3983;5.098;4.6938;4.0904;3.3818;2.4228;2.2913 +;-;-;-;-;-;-;-;-;- + 466 + 1 2.166 42389.0 1.0 531 4499 5031 HBL1_DMSO_200M_050219_1,5032 HBL1_DMSO_200M_050219_1,5032,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5033 23.284 483.0 134620.0 25 0 13856.0 -1 0 74 521.135981762443 520.1287052958429 1 521.1366454958916 MULTI CID FTMS 0 0 0 5031 142085.484375 0.3753174121915008 -9 0.056344985961914 2 3 E 1 -1 11.109 0.0 0.0 2.1359 0.0 0.0 373.07537385228665 0.0 373.07537385228665 0.0 11.10924374808178 0.0 0.0 0 0.0 0.0 0.0 0.0 E 2.1359 - 3 + 1 2.166 58235.9 1.0 532 4499 5031 HBL1_DMSO_200M_050219_1,5033 HBL1_DMSO_200M_050219_1,5033, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5034 23.294 573.0 60077.0 25 0 8086.7 -1 0 57 637.945829952559 1910.815660457877 3 637.9462768435478 MULTI CID FTMS 0 0 0 5031 94458.515625 0.4442134307191511 -11 0.078857421875 3 3 Q[YG]HHEH 7 -1 27.472 0.0 0.0 1.4377 0.0 0.0 1004.4432153536312 0.0 1004.4432153536312 0.0 22.86761062306184 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.5 Q[YG]HHEH 1.4377 - 99 + 1 2.166 34866.1 1.0 533 4499 5031 HBL1_DMSO_200M_050219_1,5034 HBL1_DMSO_200M_050219_1,5034, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5041 23.329 800.0 137460.0 25 0 14767.0 35639 SVAQVFLNNY 10 140 385.531927116636 1153.573951950108 3 385.5316039919853 MULTI CID FTMS 0 0 0 5040 153080.734375 0.6611147336728802 -4 0.0155239105224609 1 Unmodified _SVAQVFLNNY_ ENSG00000196415|ENST00000234347|PRTN3 20.41453444215458 0.5050059513928961 3 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 8 5 41.247 0.0 0.0 3.5756 0.0 0.0 0.0 311.13531469927983 311.13531469927983 18.18229908093757 0.0 0.0 0.0 0 0.5 2.0 0.531234684152075 0.0 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 3.5756 - 980 1 2.166 90469.0 0.6700000166893005 534 4505 5040 HBL1_DMSO_200M_050219_1,5041 HBL1_DMSO_200M_050219_1,5041,SVAQVFLNNY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5043 23.34 467.0 161950.0 25 0 20988.0 42830 VVLDNSGK 8 107 416.2321690185925 830.449785103985 2 416.2320739626884 MULTI CID FTMS 0 0 0 5042 169286.609375 0.6604276697632149 -4 0.0277099609375 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 21.74664581756881 0.5868176546531598 3 VVSPASSGK 9 4 + 57.819 0.0 0.0 6.9624 6.9624 92.699 0.0 0.0 0.0 43.3070657987306 9.186749122038556 9.186749122038556 13.911317625438826 0 0.805462187404089 2.0 0.4247425010840047 0.4247425010840047 VVSPASSGK;VVSPYVAP;VVSE{[NV]|[RG]}GK;VVSE{[QN]|[E{I|L}]|[KN]}R;VVSPHHR;VVSPA[YV]P;VVSP[{I|L}P][YG] 6.9624;5.2872;5.279;5.267;5.1165;4.6706;4.3286 -;-;-;-;-;-;- 149 + 1 2.166 64792.2 1.0 535 4506 5042 HBL1_DMSO_200M_050219_1,5043 HBL1_DMSO_200M_050219_1,5043,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5044 23.342 131.0 201750.0 25 0 7952.4 -1 0 61 404.0222368456053 2015.0748018950264 5 404.2228576540947 MULTI CID FTMS 0 0 0 5042 346576.78125 0.4484663446953874 29 -0.6335239410400391 2 3 K 1 -1 13.099 0.0 0.0 0.65005 0.0 0.0 1868.9692548752985 0.0 1868.9692548752985 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.65005 - 49 + 1 2.166 33558.5 1.0 536 4506 5042 HBL1_DMSO_200M_050219_1,5044 HBL1_DMSO_200M_050219_1,5044, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5045 23.356 800.0 189410.0 25 0 9519.9 + 38385 TRATPSAAFL 10 188 345.5269948185099 1033.5591550557297 3 345.5269958376884 MULTI CID FTMS 0 0 0 5042 88167.359375 0.0181323191739542 -13 0.0976409912109375 3 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 20.41453444215458 0.5050059513928961 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 21.616 0.0 0.0 2.0914 0.0 0.0 0.0 601.3021018256463 601.3021018256463 3.137933066116481 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.5941876774005248 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 2.0914 + + 316 1 2.166 129918.0 0.4099999964237213 537 4506 5042 HBL1_DMSO_200M_050219_1,5045 HBL1_DMSO_200M_050219_1,5045,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5048 23.376 800.0 45913.0 25 0 5088.7 -1 0 61 585.7581747540095 2339.0035931496377 4 586.0085327029228 MULTI CID FTMS 0 0 0 5047 108297.34375 0.95840186109746 -1 0.0038814544677734 1 3 SSA 3 -1 13.188 0.0 0.0 0.56381 0.0 0.0 1049.452717068377 1041.4290626621391 2090.8817797305164 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SSA 0.56381 - 28 + 1 2.163 39988.9 0.5400000214576721 538 4508 5047 HBL1_DMSO_200M_050219_1,5048 HBL1_DMSO_200M_050219_1,5048, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5049 23.39 800.0 204770.0 25 0 32604.0 + 43116 VYPDKTRPR 9 118 377.88022360224943 1130.6188414069484 3 377.8800231814384 MULTI CID FTMS 0 0 0 5047 147615.78125 0.3883843304597347 -7 0.0625343322753906 2 Unmodified _VYPDKTRPR_ ENSG00000128708|ENST00000264108|HAT1;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1 46.0223103267499 0.0490911897871712 3 VYPDKTRPR 9 0 + 87.016 0.0 0.0 7.6963 7.6963 87.411 0.0 0.0 0.0 36.478174818886366 4.313637641589878 4.313637641589878 4.313637641589878 0 0.5451140161145328 2.0 0.0 1.774227503252014 + + VYPDKTRPR;VYPDKTRRP;VYP[VG]STRPR;VYP[VG]STRRP;VYPRE[KS]PR;VY[VG]PSTRPR;VYPRE[KS]RP;VY[VG]PSTRRP;VY[QT]KVTHR;VYRPE[KS]PR 7.6963;7.3148;6.3494;5.9678;5.7514;5.7074;5.3698;5.3259;5.2928;5.1095 +;-;-;-;-;-;-;-;-;- + 293 + 1 2.163 137771.7 0.6899999976158142 539 4508 5047 HBL1_DMSO_200M_050219_1,5049 HBL1_DMSO_200M_050219_1,5049,VYPDKTRPR True True VYPDKTRPR 23.389985 377.880023181438 4201985.5 5047.0 ENST00000457761.6_1_2:172821936-172844354:+|nuORF;;nc|ENSG00000128708|O14929-2|HAT1;;ENSG00000128708|ENST00000264108|HAT1 6.964422861735026 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5050 23.404 800.0 79996.0 25 0 26427.0 -1 0 31 1040.3588594209132 2078.7031659086265 2 1040.358569324017 MULTI CID FTMS 0 0 0 5047 92735.9296875 0.6294772742892488 -5 0.0548992156982421 3 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 2.163 52905.3 0.4699999988079071 540 4508 5047 HBL1_DMSO_200M_050219_1,5050 HBL1_DMSO_200M_050219_1,5050, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5052 23.413 347.0 203390.0 25 0 15449.0 -1 DQVTDMMIAN 10 101 577.2469911549877 1152.4794293767752 2 577.2469970583916 MULTI CID FTMS 0 0 0 5051 215397.453125 0.4750847733212704 6 -0.1205253601074218 1 Oxidation (M) _DQVTDM(Oxidation (M))MIAN_ ENSG00000124171|ENST00000371610|PARD6B;ENSG00000178184|ENST00000353265|PARD6G 12.240655878213236 0.6421556946785427 3 [AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQ{[QG]|[NA]} 11 -1 + 46.184 0.0 0.0 4.0073 4.0073 80.47 0.0 0.0 0.0 7.155471094041772 33.11989866861396 7.155471094041772 9.128498242810998 0 0.5 2.0 0.3807196863200844 0.0 [AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQ{[QG]|[NA]};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EA[AG]Q{[QG]|[NA]};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQ[AG]{[QG]|[NA]};[HS][PG]DEAQQ{[QG]|[NA]};[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQ{[QG]|[NA]};[HS][PG]DEA[AG]Q{[QG]|[NA]};[HS][PG]DEAQ[AG]{[QG]|[NA]};[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQ[AG]{[QG]|[NA]};[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EA[AG]Q{[QG]|[NA]} 4.0073;3.2153;3.2153;2.7113;2.4347;1.9192;1.9192;1.6395;1.6395 -;-;-;-;-;-;-;-;- 397 1 2.163 59651.4 1.0 541 4509 5051 HBL1_DMSO_200M_050219_1,5052 HBL1_DMSO_200M_050219_1,5052,DQVTDMMIAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5053 23.416 196.0 390620.0 25 0 98282.0 + 4113 DAPAGRKV 8 71 407.23285950935855 812.4511660855171 2 407.2323486208916 MULTI CID FTMS 0 0 0 5051 443842.71875 0.9354357492193872 -5 0.0948143005371093 2 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 16.942295170755138 0.6606234159769251 3 DAPA 4 4 56.186 0.0 0.0 6.9156 0.0 0.0 0.0 455.2733091370183 455.2733091370183 45.18273621671263 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + DAPA 6.9156 + + 25 + 1 2.163 65001.8 1.0 542 4509 5051 HBL1_DMSO_200M_050219_1,5053 HBL1_DMSO_200M_050219_1,5053,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5054 23.42 188.0 415220.0 25 0 47885.0 + 2776 ATRTPWTLA 9 101 339.5235047129109 1015.5486847389328 3 339.5236999392509 MULTI CID FTMS 0 0 0 5051 179779.90625 0.126387193852031 -10 0.1338005065917968 3 Unmodified _ATRTPWTLA_ REV__ENST00000292539.8_1_8:145722821-145724209:+|nuORF 13.90604991867851 0.4602628045680013 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 13.901 0.0 0.0 1.3688 0.0 0.0 0.0 583.2915795966078 583.2915795966078 2.1181885265187184 0.0 0.0 0.0 0 0.5 0.0 0.5 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.3688 - 50 1 2.163 68946.0 1.0 543 4509 5051 HBL1_DMSO_200M_050219_1,5054 HBL1_DMSO_200M_050219_1,5054,ATRTPWTLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5055 23.434 800.0 204390.0 25 0 14708.0 -1 0 88 751.1382940901856 3750.655088117928 5 751.5385619997978 MULTI CID FTMS 0 0 0 5051 112312.1875 0.2807250913394037 -5 0.0948143005371093 4 3 SSTQTHTHQQ 10 -1 70.087 0.0 0.0 1.8686 0.0 0.0 2597.1419228272744 0.0 2597.1419228272744 0.0 58.09685037172876 0.0 0.0 0 1.424742501084005 0.0 1.274227503252014 0.4247425010840047 SSTQTHTHQQ 1.8686 - 1773 + 1 2.163 117895.3 0.4399999976158142 544 4509 5051 HBL1_DMSO_200M_050219_1,5055 HBL1_DMSO_200M_050219_1,5055, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5058 23.454 800.0 156820.0 25 0 13013.0 -1 0 70 768.544780848509 3837.687521909545 5 768.9463989138603 MULTI CID FTMS 0 0 0 5057 126006.71875 0.6077736923388122 -2 0.0337848663330078 1 3 STND 4 -1 27.128 0.0 0.0 0.70688 0.0 0.0 2771.2064960870366 646.2705782525999 3417.4770743396366 0.0 0.0 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.0 STND 0.70688 - 33 + 1 2.163 91253.0 0.6600000262260437 545 4511 5057 HBL1_DMSO_200M_050219_1,5058 HBL1_DMSO_200M_050219_1,5058, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5059 23.468 800.0 264550.0 25 0 19660.0 -1 0 88 725.5266706469913 3622.596970901957 5 725.7263061404228 MULTI CID FTMS 0 0 0 5057 139133.515625 0.3730909066836251 -2 0.0337848663330078 2 3 N{[CT]|[{M(Oxidation (M))|F}G]}[HV]AAQNSSTV 13 -1 77.754 0.0 0.0 2.1464 0.0 0.0 1530.7119133841811 776.3170260065061 2307.028939390688 0.0 0.0 0.0 0.0 0 2.8807196863200843 0.0 1.424742501084005 0.0 N{[CT]|[{M(Oxidation (M))|F}G]}[HV]AAQNSSTV 2.1464 - 779 + 1 2.163 152202.3 0.6100000143051147 546 4511 5057 HBL1_DMSO_200M_050219_1,5059 HBL1_DMSO_200M_050219_1,5059, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5060 23.482 800.0 35135.0 25 0 3567.2 -1 0 48 590.5187894279895 2358.046051845558 4 590.7690917849541 MULTI CID FTMS 0 0 0 5057 101116.6484375 1.0 0 0.0 3 3 AQC 3 -1 16.198 0.0 0.0 0.68692 0.0 0.0 1465.6741168863766 587.2441500299436 2052.91826691632 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AQC 0.68692 - 44 + 1 2.163 30995.8 0.5400000214576721 547 4511 5057 HBL1_DMSO_200M_050219_1,5060 HBL1_DMSO_200M_050219_1,5060, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5064 23.494 17.0 3046500.0 25 0 532590.0 + 36009 SVQHVDAAEK 10 76 361.8527598741856 1082.536450222757 3 361.8523132205009 MULTI CID FTMS 0 0 0 5063 3074907.25 0.0569283218779603 33 -0.6217269897460938 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 3 [VS]AGHVDAAEK 11 2 [VS]AG + + 41.808 22.747 7.2407 3.862 3.862 52.175 0.0 0.0 0.0 0.0 17.83775335656975 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.2887254899964357 [VS]AGHVDAAEK 3.862 - 206 + 1 2.163 51435.4 1.0 548 4514 5063 HBL1_DMSO_200M_050219_1,5064 HBL1_DMSO_200M_050219_1,5064,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5065 23.508 800.0 96201.0 25 0 16156.0 -1 0 42 741.3393182313033 3701.660208823516 5 741.5404540896416 MULTI CID FTMS 0 0 0 5063 27598.8984375 0.3850143361659813 -2 0.0078086853027343 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.163 65077.8 0.4799999892711639 549 4514 5063 HBL1_DMSO_200M_050219_1,5065 HBL1_DMSO_200M_050219_1,5065, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5066 23.511 133.0 608250.0 25 0 108480.0 36966 TFEHLFIK 8 77 517.786630013618 1033.558707094036 2 517.7866699099541 MULTI CID FTMS 0 0 0 5063 499287.90625 0.4391029710635082 -6 0.1294078826904297 3 Unmodified _TFEHLFIK_ ENSG00000116678|ENST00000349533|LEPR 9.347437153973935 0.7675937258251505 3 KTRH[WP]K 7 6 19.186 0.0 0.0 1.8563 0.0 0.0 82.00840811169083 0.0 82.00840811169083 0.0 12.530382041820754 0.0 0.0 0 0.2742275032520141 0.0 0.4247425010840047 0.2742275032520141 KTRH[WP]K 1.8563 - 26 + 1 2.163 67870.6 1.0 550 4514 5063 HBL1_DMSO_200M_050219_1,5066 HBL1_DMSO_200M_050219_1,5066,TFEHLFIK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5067 23.524 800.0 76402.0 25 0 14547.0 -1 0 44 938.420352074316 3749.652302430864 4 938.9251586794852 MULTI CID FTMS 0 0 0 5063 74207.9296875 1.0 0 0.0 4 3 SG 2 -1 5.5732 0.0 0.0 0.14863 0.0 0.0 2607.1470056552766 995.436654912756 3602.583660568033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SG 0.14863 - 14 + 1 2.163 49546.1 0.4699999988079071 551 4514 5063 HBL1_DMSO_200M_050219_1,5067 HBL1_DMSO_200M_050219_1,5067, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5069 23.53 101.0 499110.0 25 0 43227.0 31810 RSYAADEK 8 69 470.2302577042992 938.4459624753983 2 470.2301513552666 MULTI CID FTMS 0 0 0 5068 569588.3125 0.6091837728497901 10 -0.2518520355224609 1 Unmodified _RSYAADEK_ ENSG00000185760|ENST00000370398|KCNQ5;nc|ENSG00000185760|Q9NR82-2|KCNQ5;nc|ENSG00000185760|Q9NR82-3|KCNQ5;nc|ENSG00000185760|Q9NR82-4|KCNQ5;nc|ENSG00000185760|Q9NR82-5|KCNQ5;nc|ENSG00000185760|Q9NR82-6|KCNQ5;nc|ENSG00000185760|Q9NR82-7|KCNQ5 24.020572477871973 0.5389365498350341 3 HVDAAEK 7 4 54.786 0.0 0.0 5.838 0.0 0.0 170.0695357378233 0.0 170.0695357378233 0.0 36.08935127453748 0.0 0.0 0 2.4291746928241125 0.0 0.3807196863200844 0.2742275032520141 HVDAAEK 5.838 - 165 + 1 2.167 42999.8 1.0 552 4515 5068 HBL1_DMSO_200M_050219_1,5069 HBL1_DMSO_200M_050219_1,5069,RSYAADEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5070 23.544 800.0 130220.0 25 0 6513.9 -1 0 93 504.77560151225634 2015.0733001826247 4 505.0262328982353 MULTI CID FTMS 0 0 0 5068 71635.203125 0.096101078065303 37 -0.6604518890380859 2 3 V{I|L}QMRAA[HK]{[ES]|[DT]|[{I|L}C]}D 12 -1 86.297 0.0 0.0 4.2826 0.0 0.0 0.0 646.3065889947874 646.3065889947874 72.31730022313528 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.2302046884880935 0.8807196863200843 V{I|L}QMRAA[HK]{[ES]|[DT]|[{I|L}C]}D 4.2826 - 318 + 1 2.167 87111.8 0.5699999928474426 553 4515 5068 HBL1_DMSO_200M_050219_1,5070 HBL1_DMSO_200M_050219_1,5070, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5071 23.558 800.0 34116.0 25 0 2793.1 -1 0 58 581.2594529726942 1740.7565295182826 3 581.2598144412041 MULTI CID FTMS 0 0 0 5068 79510.25 0.280547601544533 7 -0.1601238250732422 3 3 QGSY 4 -1 23.761 0.0 0.0 1.365 0.0 0.0 893.4158199306034 409.1476839654906 1302.563503896094 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.5 QGSY 1.365 - 79 + 1 2.167 33670.4 0.3899999856948852 554 4515 5068 HBL1_DMSO_200M_050219_1,5071 HBL1_DMSO_200M_050219_1,5071, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5073 23.563 106.0 521530.0 25 0 42004.0 + 36020 SVQHVDAAEK 10 76 542.275195708579 1082.5358384839578 2 542.2751342654228 MULTI CID FTMS 0 0 0 5072 655738.375 0.0327759912345224 33 -0.5870037078857422 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 74.09353968926766 0.0188047629662086 3 [VS]QHVDAAEK 10 0 + 113.73 0.0 0.0 10.506 10.506 94.644 0.0 0.0 0.0 16.065595694057293 16.065595694057293 16.065595694057293 9.164539485499262 0 3.2971062485323515 2.0 0.8807196863200843 0.7614393726401688 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAEK;[VS]AGHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]QHVDAAA[VS];[VS]QHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;{[QV]|[N{I|L}]|[RA]|[KV]}SHVDAAEK;[VS]AG{[MS]|[{M(Oxidation (M))|F}A]}{[CP]|[EA]}{M(Oxidation (M))|F}GK 10.506;9.659;9.0215;7.6639;7.4084;7.0531;6.801;6.6149;5.9693;5.8715 +;-;-;-;-;-;-;-;-;- + 1535 + 1 2.167 50049.7 1.0 555 4516 5072 HBL1_DMSO_200M_050219_1,5073 HBL1_DMSO_200M_050219_1,5073,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5074 23.576 800.0 57848.0 25 0 7109.0 -1 0 70 637.945829952559 1910.815660457877 3 637.9456664919853 MULTI CID FTMS 0 0 0 5072 81415.9375 0.3828776333482743 6 -0.1266040802001953 2 3 Q[YG]HHEH 7 -1 33.76 0.0 0.0 1.7668 0.0 0.0 1004.4415795755416 0.0 1004.4415795755416 0.0 26.54184173405945 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.4247425010840047 Q[YG]HHEH 1.7668 - 139 + 1 2.167 41602.1 0.4399999976158142 556 4516 5072 HBL1_DMSO_200M_050219_1,5074 HBL1_DMSO_200M_050219_1,5074, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5076 23.593 800.0 128920.0 25 0 13580.0 + 39642 VDWELHVEK 9 152 385.531927116636 1153.573951950108 3 385.5314514040947 MULTI CID FTMS 0 0 0 5075 62406.09375 0.2695152216086698 8 -0.199869155883789 1 Unmodified _VDWELHVEK_ REV__ENSG00000075420|ENST00000415807|FNDC3B 11.640296217721598 0.521594087909532 3 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 8 -1 41.49 0.0 0.0 3.5966 0.0 0.0 0.0 311.136780614673 311.136780614673 22.950397039808763 0.0 0.0 0.0 0 0.0 2.0 1.2104093769761877 0.0 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 3.5966 - 539 1 2.167 85747.7 0.4000000059604645 557 4517 5075 HBL1_DMSO_200M_050219_1,5076 HBL1_DMSO_200M_050219_1,5076,VDWELHVEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5078 23.602 394.0 137090.0 25 0 16679.0 + 42953 VVSPKSQS 8 90 416.2321690185925 830.449785103985 2 416.2319518923759 MULTI CID FTMS 0 0 0 5077 111687.8125 0.4357209469942806 8 -0.2193946838378906 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 14.838274106304384 0.6917062315640577 3 VVSPHHR 7 4 + 44.154 0.0 0.0 5.3169 5.3169 77.793 0.0 0.0 0.0 33.01396324243501 1.7187804944751548 1.7187804944751548 2.730012720637376 0 0.7742275032520141 2.0 0.0 0.0 VVSPHHR;VVSE{[QN]|[E{I|L}]|[KN]}R;VVSPYVAP;VVSPAS[SG]K;VVSPA[YV]P 5.3169;4.9881;4.7791;4.3131;4.1249 -;-;-;-;- 164 + 1 2.167 48411.8 1.0 558 4518 5077 HBL1_DMSO_200M_050219_1,5078 HBL1_DMSO_200M_050219_1,5078,VVSPKSQS False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5079 23.611 529.0 219750.0 25 0 55235.0 3541 CWAGTCRPRRP 11 78 434.8820112736458 0 434.8820983767509 PEAK CID FTMS 0 0 0 5077 216555.578125 0.7238138395749563 29 -0.5185413360595703 2 Unmodified _CWAGTCRPRRP_ ENSG00000187559|ENST00000342833|FOXD4L3;ENSG00000273514|ENST00000622588|FOXD4L6 1.1933415558491238 0.4761840153648598 3 K 1 11 6.9897 0.0 0.0 0.8055 0.0 0.0 211.34103981301763 525.2902926080686 736.6313324210862 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.8055 - 6 + 1 2.167 92193.1 1.0 559 4518 5077 HBL1_DMSO_200M_050219_1,5079 HBL1_DMSO_200M_050219_1,5079,CWAGTCRPRRP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5080 23.625 800.0 101450.0 25 0 9294.5 35578 STSFQNAGH 9 118 474.7118149918867 947.4090770505734 2 474.7117187380791 MULTI CID FTMS 0 0 0 5077 124814.671875 0.5723931039725956 -9 0.1886978149414062 3 Unmodified _STSFQNAGH_ ENST00000465215.1_1_3:101713409-101713700:+|nuORF 14.838274106304384 0.4350285940865338 3 STHEQH 6 5 66.024 0.0 0.0 6.9689 0.0 0.0 210.09935468334 0.0 210.09935468334 0.0 54.56994074453036 0.0 0.0 0 2.079689690656103 0.0 0.5 0.6861818737241735 STHEQH 6.9689 - 547 + 1 2.167 65413.8 0.4900000095367431 560 4518 5077 HBL1_DMSO_200M_050219_1,5080 HBL1_DMSO_200M_050219_1,5080,STSFQNAGH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5082 23.63 11.0 4600900.0 25 0 444760.0 + 38386 TRATPSAAFL 10 77 345.5269948185099 1033.5591550557297 3 345.5268127322197 MULTI CID FTMS 0 0 0 5081 4862442.5 1.0 0 0.0 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 16.149105407346934 0.5765757077271437 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 16.682 0.0 0.0 1.6141 0.0 0.0 0.0 601.3027848283485 601.3027848283485 -2.3755228526113044 0.0 -2.3755228526113044 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.6141 + + 89 1 2.167 49101.6 1.0 561 4519 5081 HBL1_DMSO_200M_050219_1,5082 HBL1_DMSO_200M_050219_1,5082,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5083 23.644 800.0 137490.0 25 0 19403.0 + 8905 FAGLQFNEK 9 128 351.8494462072304 1052.526509221891 3 351.8488036990166 MULTI CID FTMS 0 0 0 5081 103615.65625 0.4382393850032352 -5 0.1357383728027343 2 Unmodified _FAGLQFNEK_ REV__ENSG00000166575|ENST00000305494|TMEM135;REV__nc|ENSG00000166575|Q86UB9-2|TMEM135 16.942295170755138 0.3780752226737986 3 HVDAAEK 7 -1 35.425 0.0 0.0 3.3658 0.0 0.0 284.15175984645776 0.0 284.15175984645776 0.0 7.731237988471378 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3494850021680094 HVDAAEK 3.3658 - 577 + 1 2.167 96490.1 0.4199999868869781 562 4519 5081 HBL1_DMSO_200M_050219_1,5083 HBL1_DMSO_200M_050219_1,5083,FAGLQFNEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5084 23.658 800.0 30823.0 25 0 1240.2 -1 0 37 839.1724078617976 4190.825656975988 5 839.7739745974541 MULTI CID FTMS 0 0 0 5081 60837.85546875 1.0 0 0.0 3 3 D 1 -1 0.71334 0.0 0.0 0.017021 0.0 0.0 3245.409105317588 827.3466890924436 4072.755794410032 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.017021 - 2 + 1 2.167 23744.1 0.3199999928474426 563 4519 5081 HBL1_DMSO_200M_050219_1,5084 HBL1_DMSO_200M_050219_1,5084, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5086 23.674 800.0 132140.0 25 0 17497.0 + 43117 VYPDKTRPR 9 115 377.88022360224943 1130.6188414069484 3 377.8799011111259 MULTI CID FTMS 0 0 0 5085 103264.8359375 0.2716948271113139 5 -0.118499755859375 1 Unmodified _VYPDKTRPR_ ENSG00000128708|ENST00000264108|HAT1;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1 40.72490554402381 0.0714771638475563 3 VYPDK 5 4 75.525 0.0 0.0 6.68 0.0 0.0 0.0 525.2912081354124 525.2912081354124 62.33746927536646 0.0 0.0 0.0 0 0.8274509799928715 2.0 0.0 1.2302046884880935 + VYPDK 6.68 + + 75 + 1 2.167 92893.1 0.5600000023841858 564 4520 5085 HBL1_DMSO_200M_050219_1,5086 HBL1_DMSO_200M_050219_1,5086,VYPDKTRPR True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5088 23.679 47.0 1157100.0 25 0 93151.0 + 2777 ATRTPWTLA 9 75 339.5235047129109 1015.5486847389328 3 339.5231201052666 MULTI CID FTMS 0 0 0 5087 1149034.375 0.8077834354514928 2 -0.0142631530761718 1 Unmodified _ATRTPWTLA_ REV__ENST00000292539.8_1_8:145722821-145724209:+|nuORF 9.38312468134398 0.5871240394367778 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 18.232 0.0 0.0 1.7953 0.0 0.0 0.0 583.2919274991369 583.2919274991369 5.06706800443169 0.0 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.7953 - 58 1 2.167 51962.8 1.0 565 4521 5087 HBL1_DMSO_200M_050219_1,5088 HBL1_DMSO_200M_050219_1,5088,ATRTPWTLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5089 23.684 320.0 260990.0 25 0 57344.0 + 4114 DAPAGRKV 8 72 407.23285950935855 812.4511660855171 2 407.2325927615166 MULTI CID FTMS 0 0 0 5087 257176.34375 0.5420207105679458 7 -0.160867691040039 2 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 21.74664581756881 0.5868176546531598 3 DAPA 4 4 59.993 0.0 0.0 7.3842 0.0 0.0 0.0 455.2735858713295 455.2735858713295 51.04039720691517 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + DAPA 7.3842 + + 32 + 1 2.167 71041.7 1.0 566 4521 5087 HBL1_DMSO_200M_050219_1,5089 HBL1_DMSO_200M_050219_1,5089,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5092 23.704 800.0 28526.0 25 0 1990.0 -1 0 34 856.5789397020412 4277.858316177206 5 857.1799804568291 MULTI CID FTMS 0 0 0 5091 18679.009765625 0.3236281849633993 1 -0.0439720153808593 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.167 24219.0 0.4399999976158142 567 4523 5091 HBL1_DMSO_200M_050219_1,5092 HBL1_DMSO_200M_050219_1,5092, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5093 23.718 800.0 25472.0 25 0 1064.7 -1 0 29 827.5678756083713 4132.8029957088565 5 827.9664794802666 MULTI CID FTMS 0 0 0 5091 24255.75390625 0.5195865614307198 1 -0.0439720153808593 2 3 H 1 -1 3.4949 0.0 0.0 0.084564 0.0 0.0 3176.370696980144 816.3433321588499 3992.714029138994 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.084564 - 2 + 1 2.167 24799.8 0.449999988079071 568 4523 5091 HBL1_DMSO_200M_050219_1,5093 HBL1_DMSO_200M_050219_1,5093, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5094 23.732 800.0 23447.0 25 0 681.46 -1 0 35 887.7952205099597 4433.939720216798 5 888.1981078982353 MULTI CID FTMS 0 0 0 5091 51540.3828125 1.0 0 0.0 3 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.15764 0.0 0.0 3568.5692664218777 715.2957857721311 4283.865052194009 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.15764 - 1 + 1 2.167 20601.7 0.4199999868869781 569 4523 5091 HBL1_DMSO_200M_050219_1,5094 HBL1_DMSO_200M_050219_1,5094, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5096 23.748 800.0 30616.0 25 0 2920.0 -1 0 35 725.5266706469913 3622.596970901957 5 725.9291259646416 MULTI CID FTMS 0 0 0 5095 20469.15625 0.0742872618927859 10 -0.2162761688232422 1 3 G 1 -1 3.9794 0.0 0.0 0.10985 0.0 0.0 2727.2040398490253 835.3474825494749 3562.5515223985003 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.10985 - 4 + 1 2.167 27874.9 0.3499999940395355 570 4524 5095 HBL1_DMSO_200M_050219_1,5096 HBL1_DMSO_200M_050219_1,5096, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5097 23.762 800.0 32507.0 25 0 1293.5 -1 THFSCLSSKYM 11 55 688.8030147070673 0 688.9897338747978 PEAK CID FTMS 0 0 0 -1 0 2 Carbamidomethyl (C),Oxidation (M) _THFSC(Carbamidomethyl (C))LSSKYM(Oxidation (M))_ ENSG00000137766|ENST00000260323|UNC13C;ENST00000561210.1_1_15:54556427-54709226:+|nuORF 2.282774691075616 0.4761840153648598 3 N 1 -1 8.0989 0.0 0.0 0.58876 0.0 0.0 518.2059917170658 740.3272799127561 1258.533271629822 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 N 0.58876 - 13 + 1 2.167 29486.7 0.3799999952316284 571 4524 5095 HBL1_DMSO_200M_050219_1,5097 HBL1_DMSO_200M_050219_1,5097,THFSCLSSKYM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5098 23.776 800.0 50480.0 25 0 3522.8 -1 0 29 802.9542459549153 4009.7348474415767 5 803.3570434451103 MULTI CID FTMS 0 0 0 5095 59814.49609375 0.8590034321965867 -1 0.0439720153808593 3 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.167 38274.5 0.3400000035762787 572 4524 5095 HBL1_DMSO_200M_050219_1,5098 HBL1_DMSO_200M_050219_1,5098, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5100 23.781 48.0 1386200.0 25 0 221150.0 + 36010 SVQHVDAAEK 10 77 361.8527598741856 1082.536450222757 3 361.8522216677666 MULTI CID FTMS 0 0 0 5099 1150448.125 0.0212992054195767 44 -0.6976337432861328 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 3 HVDAAEK 7 3 39.755 0.0 0.0 3.6724 0.0 0.0 314.16149238150746 0.0 314.16149238150746 0.0 12.800084529637983 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3807196863200844 + HVDAAEK 3.6724 + + 347 + 1 2.177 60355.0 1.0 573 4525 5099 HBL1_DMSO_200M_050219_1,5100 HBL1_DMSO_200M_050219_1,5100,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5101 23.784 146.0 485220.0 25 0 83876.0 -1 KKLSAECAK 9 75 517.786630013618 1033.558707094036 2 517.7866088747978 MULTI CID FTMS 0 0 0 5099 413178.8125 0.3633736004380583 5 -0.0664787292480468 2 Carbamidomethyl (C) _KKLSAEC(Carbamidomethyl (C))AK_ ENSG00000119912|ENST00000265986|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF;nc|ENSG00000119912|P14735-2|IDE 10.073929032068715 0.563993802247229 3 KT[RH][WP]K 7 -1 17.335 0.0 0.0 1.6772 0.0 0.0 82.00918383116955 0.0 82.00918383116955 0.0 3.3555377198554552 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.2396518287104437 KT[RH][WP]K 1.6772 - 65 + 1 2.177 59497.5 1.0 574 4525 5099 HBL1_DMSO_200M_050219_1,5101 HBL1_DMSO_200M_050219_1,5101,KKLSAECAK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5102 23.798 800.0 78384.0 25 0 6356.9 -1 0 39 826.3615461483355 4126.771348408677 5 826.3652221560478 MULTI CID FTMS 0 0 0 5099 15126.2890625 0.2358697607965481 -2 0.0879650115966796 3 3 YG 2 -1 7.9588 0.0 0.0 0.19286 0.0 0.0 3441.4910882541835 462.1738375299438 3903.6649257841273 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.19286 - 41 + 1 2.177 51334.8 0.3499999940395355 575 4525 5099 HBL1_DMSO_200M_050219_1,5102 HBL1_DMSO_200M_050219_1,5102, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5103 23.812 800.0 45921.0 25 0 5520.5 -1 0 43 660.6953745530251 3298.440490432125 5 661.0936157107353 MULTI CID FTMS 0 0 0 5099 64112.140625 1.0 0 0.0 4 3 H{[QC]|[C(Carbamidomethyl (C))A]} 3 -1 10.458 0.0 0.0 0.31705 0.0 0.0 2912.2918512846263 0.0 2912.2918512846263 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 H{[QC]|[C(Carbamidomethyl (C))A]} 0.31705 - 30 1 2.177 39069.5 0.3499999940395355 576 4525 5099 HBL1_DMSO_200M_050219_1,5103 HBL1_DMSO_200M_050219_1,5103, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5106 23.821 136.0 345130.0 25 0 24985.0 + 36021 SVQHVDAAEK 10 73 542.275195708579 1082.5358384839578 2 542.2751342654228 MULTI CID FTMS 0 0 0 5105 388107.71875 0.019398918338126 44 -0.6781349182128906 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 3 [VS]QHVDAAEK 10 0 + 94.531 0.0 0.0 8.7323 8.7323 86.035 0.0 0.0 0.0 2.366482843339341 2.366482843339341 2.366482843339341 2.366482843339341 0 3.084121882396211 2.0 0.5 0.805462187404089 + + [VS]QHVDAAEK;[VS]AGHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]QHVD[DV]GK;[VS]AGHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EK;[VS]QHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVD[DV]GK 8.7323;8.5137;7.8858;6.8023;6.4589;6.2461;6.1542;5.602;5.5031;4.7474 +;-;-;-;-;-;-;-;-;- + 634 + 1 2.177 40310.7 1.0 577 4527 5105 HBL1_DMSO_200M_050219_1,5106 HBL1_DMSO_200M_050219_1,5106,SVQHVDAAEK True True SVQHVDAAEK 23.820962 542.275134265423 4246987744.0 5105.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 11.633671442667644 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5107 23.835 800.0 105380.0 25 0 7273.0 9800 FPANYAEK 8 114 470.2301883217317 938.4458237102632 2 470.2302429080009 MULTI CID FTMS 0 0 0 5105 118269.9375 0.4146465640808542 -22 0.5028743743896484 2 Unmodified _FPANYAEK_ CON__ENSEMBL:ENSBTAP00000001528;ENSG00000205726|ENST00000381318|ITSN1;nc|ENSG00000205726|Q15811-10|ITSN1;nc|ENSG00000205726|Q15811-11|ITSN1;nc|ENSG00000205726|Q15811-12|ITSN1;nc|ENSG00000205726|Q15811-13|ITSN1;nc|ENSG00000205726|Q15811-2|ITSN1;nc|ENSG00000205726|Q15811-3|ITSN1;nc|ENSG00000205726|Q15811-4|ITSN1;nc|ENSG00000205726|Q15811-5|ITSN1;nc|ENSG00000205726|Q15811-6|ITSN1;nc|ENSG00000205726|Q15811-7|ITSN1;nc|ENSG00000205726|Q15811-8|ITSN1;nc|ENSG00000205726|Q15811-9|ITSN1 20.453626601364224 0.6087503291685402 3 HVDAAEK 7 5 68.726 0.0 0.0 7.3234 0.0 0.0 170.06960719702596 0.0 170.06960719702596 0.0 38.09106543313865 0.0 0.0 0 2.4916440611282624 0.0 0.4247425010840047 0.2887254899964357 HVDAAEK 7.3234 - 424 + 1 2.177 69302.6 0.550000011920929 578 4527 5105 HBL1_DMSO_200M_050219_1,5107 HBL1_DMSO_200M_050219_1,5107,FPANYAEK False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 5111 23.859 800.0 49467.0 25 0 2072.0 -1 0 58 879.0417395260988 2634.1033891784964 3 879.3752319216728 MULTI CID FTMS 0 0 0 5110 87373.984375 0.8919254369101761 -1 0.00390625 1 3 EQ[HS]QQ 6 -1 14.442 0.0 0.0 0.54827 0.0 0.0 1433.6156026320134 460.15754114322505 1893.7731437752384 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 EQ[HS]QQ 0.54827 - 182 + 1 2.186 35197.7 0.4600000083446502 579 4530 5110 HBL1_DMSO_200M_050219_1,5111 HBL1_DMSO_200M_050219_1,5111, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5112 23.873 800.0 60768.0 25 0 5926.1 -1 0 41 805.7577693430527 4023.752464382264 5 806.1575195193291 MULTI CID FTMS 0 0 0 5110 57800.6171875 0.4498910218985692 -27 0.5376510620117188 2 3 A 1 -1 6.9897 0.0 0.0 0.17371 0.0 0.0 3147.376562137926 802.3281954400999 3949.704757578026 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.17371 - 3 + 1 2.186 42016.2 0.4099999964237213 580 4530 5110 HBL1_DMSO_200M_050219_1,5112 HBL1_DMSO_200M_050219_1,5112, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5114 23.889 800.0 108820.0 25 0 10112.0 + -1 PASFLDPC 8 113 474.7118149918867 947.4090770505734 2 474.7118408083916 MULTI CID FTMS 0 0 0 5113 132987.453125 0.6098730216577658 4 -0.0897102355957031 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))PASFLDPC(Carbamidomethyl (C))_ REV__ENST00000520105.5_1_8:142441191-142441554:+|nuORF 13.50788311687929 0.7113601687236069 3 STHEQH 6 -1 59.418 0.0 0.0 6.2716 0.0 0.0 210.100710419908 0.0 210.100710419908 0.0 35.95741852333407 0.0 0.0 0 2.031234684152075 0.0 0.5 0.5 STHEQH 6.2716 - 541 + 1 2.186 70072.4 0.5199999809265137 581 4531 5113 HBL1_DMSO_200M_050219_1,5114 HBL1_DMSO_200M_050219_1,5114,PASFLDPC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5115 23.9 644.0 130480.0 25 0 16176.0 42831 VVLDNSGK 8 106 416.2321690185925 830.449785103985 2 416.2318908572197 MULTI CID FTMS 0 0 0 5113 154284.171875 0.6018995624576616 21 -0.3120002746582031 2 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 21.74664581756881 0.5868176546531598 3 VVA{M(Oxidation (M))|F}E[PA]V 8 6 + 48.338 0.0 0.0 5.8207 5.8207 79.762 0.0 0.0 0.0 19.03172877169749 7.742275032520141 7.742275032520141 2.98332479720628 0 0.8494850021680094 2.0 0.0 0.0 VVA{M(Oxidation (M))|F}E[PA]V;VVSYP[PA]V;[PS]AS[SG]KVV;[VG]{I|L}{M(Oxidation (M))|F}E[PA]V;[VS]VYP[PA]V;{NN|[MP]|[D{I|L}]|[EV]}N[SG]KVV;[VS][DN]AKVV;[VS][QT]QAVV;[VG]{[DA]|[EG]}[SG]KVV;[KG]DDAKVV 5.8207;5.4614;3.529;3.2221;2.4563;2.2564;2.2428;2.198;2.1275;1.2586 -;-;-;-;-;-;-;-;-;- 268 1 2.186 69984.5 1.0 582 4531 5113 HBL1_DMSO_200M_050219_1,5115 HBL1_DMSO_200M_050219_1,5115,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5117 23.905 16.0 3589600.0 25 0 307470.0 + 31899 RTTALPQFT 9 88 345.5270304964741 1033.5592620896225 3 345.5268127322197 MULTI CID FTMS 0 0 0 5116 3185623.25 0.669652765208917 -3 0.0614376068115234 1 Unmodified _RTTALPQFT_ REV__ENSG00000161649|ENST00000317310|CD300LG;REV__nc|ENSG00000161649|Q6UXG3-4|CD300LG 9.38312468134398 0.5871240394367778 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 20.005 0.0 0.0 1.9356 0.0 0.0 0.0 601.3032560563066 601.3032560563066 4.2950928051717785 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.9356 - 106 1 2.186 55575.5 1.0 583 4532 5116 HBL1_DMSO_200M_050219_1,5117 HBL1_DMSO_200M_050219_1,5117,RTTALPQFT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5118 23.916 611.0 112860.0 25 0 11042.0 + 6233 DTNADKQLS 9 112 496.2382529460117 990.4619529588234 2 496.2382995486259 MULTI CID FTMS 0 0 0 5116 136449.0625 0.067753609785188 -63 1.062051773071289 2 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 87.25819977447905 0.0157581688916699 3 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S 9 0 + 69.236 0.0 0.0 6.9902 6.9902 90.752 0.0 0.0 0.0 3.748162098248997 38.21211225000965 3.748162098248997 9.208187539523747 0 1.9291746928241125 0.0 1.5356668758921828 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S;[AG]SDADKQ{I|L}S;{[QS]|[NT]}DADKQ{I|L}S;{[QG]|[NA]}DTDKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK{I|L}QS;[AG]SDADK[AG]{I|L}S;{[QS]|[NT]}DADK[AG]{I|L}S 6.9902;6.0606;6.0606;5.9872;5.8584;5.3181;5.1353;5.1185;5.062;4.9287 +;-;-;-;-;-;-;-;-;- + 1061 1 2.186 57224.9 1.0 584 4532 5116 HBL1_DMSO_200M_050219_1,5118 HBL1_DMSO_200M_050219_1,5118,DTNADKQLS True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5119 23.93 800.0 74543.0 25 0 6042.1 -1 0 99 610.2702089270837 1827.7887973814509 3 610.2688476443291 MULTI CID FTMS 0 0 0 5116 93627.2734375 0.5877326058128404 -1 0.0274105072021484 3 3 [HS]{[MG]|[TS]}SYGSQ 9 -1 40.044 0.0 0.0 2.1908 0.0 0.0 0.0 890.3858127794807 890.3858127794807 14.789842917204304 0.0 0.0 0.0 0 0.0 0.7958800173440752 1.0138793319624575 0.5 [HS]{[MG]|[TS]}SYGSQ 2.1908 - 1046 1 2.186 56045.4 0.4300000071525574 585 4532 5116 HBL1_DMSO_200M_050219_1,5119 HBL1_DMSO_200M_050219_1,5119, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5121 23.935 49.0 1233900.0 25 0 93775.0 + 2778 ATRTPWTLA 9 78 339.52351497407506 1015.5487155224253 3 339.5231811404228 MULTI CID FTMS 0 0 0 5120 1155873.0 0.761075970855028 -3 0.0869827270507812 1 Unmodified _ATRTPWTLA_ REV__ENST00000292539.8_1_8:145722821-145724209:+|nuORF 9.38312468134398 0.5871240394367778 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 18.288 0.0 0.0 1.8008 0.0 0.0 0.0 583.292137611916 583.292137611916 3.90227544246442 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.8008 - 59 1 2.188 59081.1 1.0 586 4533 5120 HBL1_DMSO_200M_050219_1,5121 HBL1_DMSO_200M_050219_1,5121,ATRTPWTLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5122 23.949 800.0 144950.0 25 0 20297.0 -1 IRAPTTMK 8 127 467.2628839213602 932.5112149095204 2 467.2624389529228 MULTI CID FTMS 0 0 0 5120 137929.828125 0.3949617208546287 -14 0.3045883178710937 2 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 22.736283301280096 0.5659792798204337 3 T{M(Oxidation (M))|F}K 3 -1 37.99 0.0 0.0 4.0739 0.0 0.0 538.3234840519017 0.0 538.3234840519017 0.0 17.389873650292635 0.0 0.0 0 1.305462187404089 0.0 0.0 0.3252574989159953 T{M(Oxidation (M))|F}K 4.0739 + + 235 + 1 2.188 91805.3 0.5299999713897705 587 4533 5120 HBL1_DMSO_200M_050219_1,5122 HBL1_DMSO_200M_050219_1,5122,IRAPTTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5124 23.956 292.0 303380.0 25 0 74216.0 + 4115 DAPAGRKV 8 80 407.23285950935855 812.4511660855171 2 407.2324096560478 MULTI CID FTMS 0 0 0 5123 246665.75 0.5198687528497662 20 -0.260080337524414 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 21.74664581756881 0.5868176546531598 3 DAPA 4 4 56.67 0.0 0.0 6.9752 0.0 0.0 0.0 455.2727738842217 455.2727738842217 35.70107520596089 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + DAPA 6.9752 + + 36 + 1 2.188 71955.6 1.0 588 4534 5123 HBL1_DMSO_200M_050219_1,5124 HBL1_DMSO_200M_050219_1,5124,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5125 23.963 350.0 205810.0 25 0 12505.0 + + 7696 TFQKKTKEM 9 115 380.8741441114725 1139.6006029346174 3 380.8737975955009 MULTI CID FTMS 0 0 0 5123 229699.40625 0.5220901958887422 -8 0.1365680694580078 2 Unmodified _EKTKKQFTM_ ENST00000278882.8_1_20:29631550-29631607:+|nuORF;ENST00000507103.1_1_4:190881915-190881972:+|nuORF 20.41453444215458 0.284085796332423 3 EQ{M(Oxidation (M))|F}TM 5 -1 29.469 0.0 0.0 2.5859 0.0 0.0 485.33299452949376 0.0 485.33299452949376 0.0 2.112496903393861 0.0 0.0 0 0.3494850021680094 0.0 0.3807196863200844 0.0 EQ{M(Oxidation (M))|F}TM 2.5859 - 215 1 2.188 63063.5 1.0 589 4534 5123 HBL1_DMSO_200M_050219_1,5125 HBL1_DMSO_200M_050219_1,5125,EKTKKQFTM False False TFQKKTKEM 23.962559 380.873797595501 5136675.0 5123.0 ENST00000278882.8_1_20:29631550-29631607:+|nuORF;;ENST00000507103.1_1_4:190881915-190881972:+|nuORF 5.026846885681152 3.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5128 23.982 800.0 147550.0 25 0 52640.0 8876 FADTYLKDSSR 11 100 434.8818852574012 0 434.8816711306572 PEAK CID FTMS 0 0 0 5127 180310.34375 0.7280257100874846 -3 0.0365447998046875 1 Unmodified _FADTYLKDSSR_ ENSG00000073350|ENST00000392550|LLGL2;ENST00000545227.6_1_17:73554011-73570984:+|nuORF;nc|ENSG00000073350|Q6P1M3-2|LLGL2 1.3295316138638542 0.4761840153648598 3 {M(Oxidation (M))|F} 1 10 1.2591 0.0 0.0 0.14509 0.0 0.0 433.5328917532806 284.1624544733032 717.6953462265838 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.14509 + + 1 + 1 2.188 95081.4 0.7599999904632568 590 4536 5127 HBL1_DMSO_200M_050219_1,5128 HBL1_DMSO_200M_050219_1,5128,FADTYLKDSSR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5129 23.996 800.0 179920.0 25 0 41097.0 + 9015 FDFLDQAPEPR 11 71 667.8224919674872 1333.6304310017742 2 667.8227416872978 MULTI CID FTMS 0 0 0 5127 90569.765625 0.1051312446323161 -13 0.2779712677001953 2 Unmodified _FDFLDQAPEPR_ REV__ENSG00000198355|ENST00000360612|PIM3 7.608950283845883 0.8392484121837455 3 H{M(Oxidation (M))|F}R 3 -1 26.427 0.0 0.0 1.9816 0.0 0.0 875.426073142775 0.0 875.426073142775 0.0 16.694699959806982 0.0 0.0 0 0.5 0.0 0.0 0.0 H{M(Oxidation (M))|F}R 1.9816 - 48 1 2.188 109666.7 0.5299999713897705 591 4536 5127 HBL1_DMSO_200M_050219_1,5129 HBL1_DMSO_200M_050219_1,5129,FDFLDQAPEPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5132 24.016 800.0 197910.0 25 0 8333.8 10715 FWTSFIFCQR 10 165 334.4151883833679 1333.6316476670715 4 334.4148437380791 MULTI CID FTMS 0 0 0 5131 75144.59375 0.2136461740652129 -12 0.1881523132324218 1 Unmodified _FWTSFIFCQR_ ENST00000299505.6_1_19:34791118-34791184:+|nuORF 6.2057823575117 0.6979311171683138 3 {[QG]|[NA]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP]DT{M(Oxidation (M))|F}QR 11 8 {[QG]|[NA]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP]DT + + 25.256 -6.9694 -0.78804 1.8938 1.8938 48.748 0.0 0.0 0.0 0.0 12.156862918214948 0.0 0.0 0 0.0 0.0 0.0 0.3829131673969607 {[QG]|[NA]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP]DT{M(Oxidation (M))|F}QR 1.8938 - 129 + 1 2.188 128988.6 0.4799999892711639 592 4538 5131 HBL1_DMSO_200M_050219_1,5132 HBL1_DMSO_200M_050219_1,5132,FWTSFIFCQR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5133 24.017 9.7 4483500.0 25 0 892060.0 + 28188 PQDESISFQQR 11 60 445.5506305676751 1333.6300623032253 3 445.5508300662041 MULTI CID FTMS 0 0 0 5131 3253231.25 0.287297897911317 -13 0.2238674163818359 2 Unmodified _PQDESISFQQR_ REV__ENSG00000169184|ENST00000302326|MN1 8.155526934196011 0.8366696279279818 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F} + + 34.667 9.9215 1.4824 2.5994 2.5994 49.533 0.0 0.0 0.0 0.0 21.75968732272281 0.0 0.0 0 0.0 0.0 0.0 0.75 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 2.5994 - 85 + 1 2.188 43359.0 1.0 593 4538 5131 HBL1_DMSO_200M_050219_1,5133 HBL1_DMSO_200M_050219_1,5133,PQDESISFQQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5134 24.031 800.0 14832.0 25 0 807.58 -1 0 33 703.0617466871466 0 703.0643798708916 PEAK CID FTMS 0 0 0 5131 61978.51953125 1.0 0 0.0 3 3 H 1 -1 4.6041 0.0 0.0 0.3279 0.0 0.0 564.065618763162 699.9688204400999 1264.034439203262 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.3279 - 2 + 1 2.188 20314.5 0.4600000083446502 594 4538 5131 HBL1_DMSO_200M_050219_1,5134 HBL1_DMSO_200M_050219_1,5134, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5136 24.036 72.0 710290.0 25 0 98352.0 + 36011 SVQHVDAAEK 10 74 361.8527598741856 1082.536450222757 3 361.8522827029228 MULTI CID FTMS 0 0 0 5135 488789.1875 0.0090493617966742 58 -0.981830596923828 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 3 [VS]AGHVDAAEK 11 2 [VS]AG + + 36.38 23.795 7.5741 3.3606 3.3606 50.936 0.0 0.0 0.0 0.0 11.7137967609372 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.2887254899964357 [VS]AGHVDAAEK 3.3606 - 249 + 1 2.188 47950.0 1.0 595 4539 5135 HBL1_DMSO_200M_050219_1,5136 HBL1_DMSO_200M_050219_1,5136,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5137 24.041 276.0 225490.0 25 0 37798.0 + 12023 GPYFALSG 8 83 406.2011560158737 810.3877590985475 2 406.2007018923759 MULTI CID FTMS 0 0 0 5135 133445.09375 0.7397603590006908 3 -0.018524169921875 2 Unmodified _GPYFALSG_ REV__ENSG00000112238|ENST00000369215|PRDM13 20.871210003555333 0.6025813472596342 3 VDAAEK 6 -1 44.205 0.0 0.0 5.4548 0.0 0.0 179.0696571471787 0.0 179.0696571471787 0.0 30.2524439246897 0.0 0.0 0 2.079689690656103 0.0 0.805462187404089 0.25 VDAAEK 5.4548 - 125 + 1 2.188 54132.5 1.0 596 4539 5135 HBL1_DMSO_200M_050219_1,5137 HBL1_DMSO_200M_050219_1,5137,GPYFALSG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5139 24.046 38.0 1526700.0 25 0 304880.0 12289 GRYSPDVLK 9 62 517.7865873238868 1033.5586217145735 2 517.7867919802666 MULTI CID FTMS 0 0 0 5138 1648225.625 0.7650961635540536 3 -0.0246009826660156 1 Unmodified _GRYSPDVLK_ ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS 10.823927491677226 0.5436922275383211 3 KTRH[WP]K 7 7 19.28 0.0 0.0 1.8654 0.0 0.0 82.00841349061109 0.0 82.00841349061109 0.0 19.28031593253494 0.0 0.0 0 0.3182503180159344 0.0 0.4247425010840047 0.2396518287104437 KTRH[WP]K 1.8654 - 9 + 1 2.188 49856.9 1.0 597 4540 5138 HBL1_DMSO_200M_050219_1,5139 HBL1_DMSO_200M_050219_1,5139,GRYSPDVLK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5142 24.066 800.0 153820.0 25 0 22434.0 -1 0 88 417.0124710322016 2080.025972828008 5 417.0125915408134 MULTI CID FTMS 0 0 0 5141 96481.7109375 0.6403065488732782 -7 0.0872344970703125 1 3 TT[PG][HN] 6 -1 12.676 0.0 0.0 0.60942 0.0 0.0 1454.701185792561 0.0 1454.701185792561 0.0 0.8933257842012505 0.0 0.0 0 0.0 0.0 0.0 0.0 TT[PG][HN] 0.60942 - 164 1 2.188 102877.5 0.5899999737739563 598 4542 5141 HBL1_DMSO_200M_050219_1,5142 HBL1_DMSO_200M_050219_1,5142, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5145 24.076 209.0 221730.0 25 0 17391.0 9801 FPANYAEK 8 76 470.2301883217317 938.4458237102632 2 470.2303649783134 MULTI CID FTMS 0 0 0 5144 252715.625 0.8860042358253182 -5 0.0385398864746093 1 Unmodified _FPANYAEK_ CON__ENSEMBL:ENSBTAP00000001528;ENSG00000205726|ENST00000381318|ITSN1;nc|ENSG00000205726|Q15811-10|ITSN1;nc|ENSG00000205726|Q15811-11|ITSN1;nc|ENSG00000205726|Q15811-12|ITSN1;nc|ENSG00000205726|Q15811-13|ITSN1;nc|ENSG00000205726|Q15811-2|ITSN1;nc|ENSG00000205726|Q15811-3|ITSN1;nc|ENSG00000205726|Q15811-4|ITSN1;nc|ENSG00000205726|Q15811-5|ITSN1;nc|ENSG00000205726|Q15811-6|ITSN1;nc|ENSG00000205726|Q15811-7|ITSN1;nc|ENSG00000205726|Q15811-8|ITSN1;nc|ENSG00000205726|Q15811-9|ITSN1 15.847184025352805 0.6768015514314958 3 HVDAAEK 7 5 68.422 0.0 0.0 7.291 0.0 0.0 170.0693779455773 0.0 170.0693779455773 0.0 46.995557461415416 0.0 0.0 0 2.1237125054200234 0.0 0.4247425010840047 0.3252574989159953 HVDAAEK 7.291 - 242 + 1 2.188 40711.4 1.0 599 4544 5144 HBL1_DMSO_200M_050219_1,5145 HBL1_DMSO_200M_050219_1,5145,FPANYAEK False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 5146 24.09 800.0 121980.0 25 0 9405.0 + 36022 SVQHVDAAEK 10 101 542.275195708579 1082.5358384839578 2 542.2751342654228 MULTI CID FTMS 0 0 0 5144 209868.078125 0.010489906571399 61 -1.078399658203125 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 66.54955139489424 0.0194055320303528 3 [VS]QHVDAAEK 10 0 + 96.085 0.0 0.0 8.8759 8.8759 93.843 0.0 0.0 0.0 72.06128941425659 17.914230059397894 17.914230059397894 9.164539485499262 0 2.853917193908117 2.0 0.805462187404089 0.7887254899964358 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]QHVD[DV]GK;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{M(Oxidation (M))|F}AEK;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CT]|[{M(Oxidation (M))|F}G]}AAEK;[HV]QSVDAAEK;[VS]QHVDAAA[VS];[HQ]VSVDAAEK;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[AG]{M(Oxidation (M))|F}AEK;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QA{M(Oxidation (M))|F}EK 8.8759;8.0293;6.9965;6.4302;6.3396;6.0576;5.6711;5.5958;5.5796;5.4345 +;-;-;-;-;-;-;-;-;- + 1797 + 1 2.188 77709.7 0.75 600 4544 5144 HBL1_DMSO_200M_050219_1,5146 HBL1_DMSO_200M_050219_1,5146,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5148 24.107 800.0 117460.0 25 0 31296.0 -1 RCWWRWPRCYW 11 92 604.6102196654331 1810.808829596499 3 604.9445678591728 MULTI CID FTMS 0 0 0 5147 136159.84375 0.6571306559799159 -7 0.0898284912109375 1 2 Carbamidomethyl (C) _RC(Carbamidomethyl (C))WWRWPRC(Carbamidomethyl (C))YW_ ENST00000341500.9_1_19:7267817-7293934:-|nuORF 0.0 0.8751479354844584 3 GDVE[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]T{M(Oxidation (M))|F}Q 9 -1 36.57 0.0 0.0 2.0195 0.0 0.0 709.3606617271615 0.0 709.3606617271615 0.0 23.382222053815987 0.0 0.0 0 0.0 0.0 0.5 1.1549471895720984 GDVE[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]T{M(Oxidation (M))|F}Q 2.0195 - 1229 + 1 2.185 75194.3 0.4199999868869781 601 4545 5147 HBL1_DMSO_200M_050219_1,5148 HBL1_DMSO_200M_050219_1,5148,RCWWRWPRCYW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5151 24.127 800.0 121810.0 25 0 7794.9 -1 0 95 537.036285078664 2144.116034448256 4 537.0353271365166 MULTI CID FTMS 0 0 0 5150 168981.8125 0.0959805862631034 -16 0.2382621765136718 1 3 V{I|L}QMRAAHKKSHE{M(Oxidation (M))|F} 14 -1 124.47 0.0 0.0 5.8052 0.0 0.0 0.0 478.2068270318969 478.2068270318969 102.25258943890634 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.4247425010840047 V{I|L}QMRAAHKKSHE{M(Oxidation (M))|F} 5.8052 - 2144 + 1 2.185 87306.2 0.7300000190734863 602 4547 5150 HBL1_DMSO_200M_050219_1,5151 HBL1_DMSO_200M_050219_1,5151, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5152 24.141 800.0 66230.0 25 0 6991.8 -1 0 55 805.7577693430527 4023.752464382264 5 806.1565429568291 MULTI CID FTMS 0 0 0 5150 73135.828125 0.569252614480214 -10 0.1148586273193359 2 3 W 1 -1 3.9794 0.0 0.0 0.098898 0.0 0.0 3356.9393673137074 477.6950472467407 3834.634414560448 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.098898 - 9 + 1 2.185 45664.4 0.5 603 4547 5150 HBL1_DMSO_200M_050219_1,5152 HBL1_DMSO_200M_050219_1,5152, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5157 24.157 42.0 950220.0 25 0 82728.0 + 31900 RTTALPQFT 9 64 345.5270304964741 1033.5592620896225 3 345.5267211794853 MULTI CID FTMS 0 0 0 5156 1187302.125 0.2495838612254833 16 -0.3133983612060547 1 Unmodified _RTTALPQFT_ REV__ENSG00000161649|ENST00000317310|CD300LG;REV__nc|ENSG00000161649|Q6UXG3-4|CD300LG 13.90604991867851 0.4602628045680013 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 19.609 0.0 0.0 1.8972 0.0 0.0 0.0 601.3022519210471 601.3022519210471 4.539765525588846 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.2614393726401688 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.8972 - 65 1 2.185 41747.4 1.0 604 4551 5156 HBL1_DMSO_200M_050219_1,5157 HBL1_DMSO_200M_050219_1,5157,RTTALPQFT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5158 24.171 800.0 64146.0 25 0 3207.7 3799 DAIHKWEV 8 93 499.2568062909237 996.4990596486474 2 499.2566711306572 MULTI CID FTMS 0 0 0 5156 76700.171875 0.751657108662351 -5 0.04522705078125 2 Unmodified _DAIHKWEV_ ENSG00000135773|ENST00000271971|CAPN9;nc|ENSG00000135773|O14815-2|CAPN9 14.838274106304384 0.6917062315640577 3 HVKSV 5 6 28.912 0.0 0.0 2.9014 0.0 0.0 428.16496648634114 0.0 428.16496648634114 0.0 0.8400017628943068 0.0 0.0 0 1.25 0.0 0.3054621874040891 0.0 HVKSV 2.9014 - 193 + 1 2.185 43508.6 0.5899999737739563 605 4551 5156 HBL1_DMSO_200M_050219_1,5158 HBL1_DMSO_200M_050219_1,5158,DAIHKWEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5159 24.185 800.0 21881.0 25 0 1125.1 -1 0 39 850.0311233941768 2547.07154078273 3 850.6984130740166 MULTI CID FTMS 0 0 0 5156 66773.65625 1.0 0 0.0 3 3 Q 1 -1 5.4846 0.0 0.0 0.21533 0.0 0.0 1827.7730921516736 588.2179049127561 2415.99099706443 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.21533 - 4 + 1 2.185 21507.3 0.5 606 4551 5156 HBL1_DMSO_200M_050219_1,5159 HBL1_DMSO_200M_050219_1,5159, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5161 24.189 47.0 795400.0 25 0 95026.0 + 6234 DTNADKQLS 9 79 496.2382529460117 990.4619529588234 2 496.2382690310478 MULTI CID FTMS 0 0 0 5160 1434166.125 0.7121333794461595 -43 0.7809772491455078 1 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 69.33821966488729 0.021354776001734 3 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S 9 0 + 54.324 0.0 0.0 5.4847 5.4847 86.045 0.0 0.0 0.0 4.232712163289278 23.08931538997598 4.232712163289278 9.208187539523747 0 1.9291746928241125 0.0 1.1237125054200234 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}QG{[ES]|[DT]|[{I|L}C]}Q{I|L}S;{[QG]|[NA]}[VS]G{[ES]|[DT]|[{I|L}C]}Q{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]G{[ES]|[DT]|[{I|L}C]}Q{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}QG{[ES]|[DT]|[{I|L}C]}[AG]{I|L}S;[AG]G[VS]G{[ES]|[DT]|[{I|L}C]}Q{I|L}S 5.4847;4.5551;4.5551;3.6298;2.4295;1.9478;1.4998;1.4998;1.4759 +;-;-;-;-;-;-;-;- + 280 1 2.185 33428.9 1.0 607 4552 5160 HBL1_DMSO_200M_050219_1,5161 HBL1_DMSO_200M_050219_1,5161,DTNADKQLS True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5162 24.191 38.0 709750.0 25 0 80234.0 -1 0 52 429.8303971257711 2144.115603295856 5 430.0310241580009 MULTI CID FTMS 0 0 0 5160 729116.4375 0.3176301852525072 -8 0.1150398254394531 2 3 V[Q{I|L}]M 4 -1 16.198 0.0 0.0 0.75546 0.0 0.0 0.0 1669.8042513999055 1669.8042513999055 13.979400086720371 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V[Q{I|L}]M 0.75546 - 15 + 1 2.185 31483.6 1.0 608 4552 5160 HBL1_DMSO_200M_050219_1,5162 HBL1_DMSO_200M_050219_1,5162, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5163 24.199 438.0 229260.0 25 0 20963.0 36098 SVRSPTPYKK 10 110 388.225323438154 1161.654140914662 3 388.2255126833916 MULTI CID FTMS 0 0 0 5160 146151.21875 0.1525302730995759 -11 0.1389331817626953 3 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 20.41453444215458 0.5050059513928961 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 36.462 10.718 2.4971 3.1388 3.1388 50.46 0.0 0.0 0.0 0.0 21.92577647788781 0.0 0.0 0 0.7742275032520141 0.0 1.110924374808178 0.2396518287104437 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 3.1388 - 159 + 1 2.185 84481.2 1.0 609 4552 5160 HBL1_DMSO_200M_050219_1,5163 HBL1_DMSO_200M_050219_1,5163,SVRSPTPYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5165 24.209 425.0 191270.0 25 0 28821.0 -1 IRAPTTMK 8 91 467.2628839213602 932.5112149095204 2 467.2627746462822 MULTI CID FTMS 0 0 0 5164 259953.078125 0.7443749946868699 6 -0.1134700775146484 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 22.736283301280096 0.5659792798204337 3 QT{M(Oxidation (M))|F}K 4 -1 40.279 0.0 0.0 4.3195 0.0 0.0 410.25890885658913 0.0 410.25890885658913 0.0 20.03632698221264 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.3252574989159953 QT{M(Oxidation (M))|F}K 4.3195 - 148 + 1 2.185 69435.3 1.0 610 4553 5164 HBL1_DMSO_200M_050219_1,5165 HBL1_DMSO_200M_050219_1,5165,IRAPTTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5167 24.217 326.0 156290.0 25 0 9376.1 37016 TFQKKTKEM 9 97 380.8741441114725 1139.6006029346174 3 380.8738586306572 MULTI CID FTMS 0 0 0 5166 158875.625 0.361112845402474 12 -0.2475299835205078 1 Unmodified _TFQKKTKEM_ ENST00000278882.8_1_20:29631550-29631607:+|nuORF;ENST00000507103.1_1_4:190881915-190881972:+|nuORF 13.042465956692816 0.4836390050082244 3 TQ{M(Oxidation (M))|F}K{I|L}AAC(Carbamidomethyl (C))T 9 7 38.751 0.0 0.0 3.4004 0.0 0.0 0.0 116.05101190738516 116.05101190738516 24.058167323414764 0.0 0.0 0.0 0 0.4124379954164592 0.0 0.2742275032520141 0.0 TQ{M(Oxidation (M))|F}K{I|L}AAC(Carbamidomethyl (C))T 3.4004 - 137 + 1 2.185 45494.1 1.0 611 4554 5166 HBL1_DMSO_200M_050219_1,5167 HBL1_DMSO_200M_050219_1,5167,TFQKKTKEM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5168 24.231 800.0 17004.0 25 0 1231.6 + -1 REPCCCHTCCC 11 30 771.7457388567553 0 771.7452270388603 PEAK CID FTMS 0 0 0 5166 68492.53125 1.0 0 0.0 2 5 Carbamidomethyl (C) _REPC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))HTC(Carbamidomethyl (C))C(Carbamidomethyl (C))C_ REV__ENSG00000204323|ENST00000375215|SMIM5 0.0 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.185 18630.5 0.3499999940395355 612 4554 5166 HBL1_DMSO_200M_050219_1,5168 HBL1_DMSO_200M_050219_1,5168,REPCCCHTCCC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5171 24.239 82.0 814250.0 25 0 194940.0 + 20861 LMHFAWCLINS 11 38 667.8224919674872 1333.6304310017742 2 667.8226806521416 MULTI CID FTMS 0 0 0 5170 754254.75 0.8755210979087308 7 -0.1630668640136718 1 Unmodified _LMHFAWCLINS_ REV__ENSG00000196131|ENST00000341702|VN1R2 1.4819007175156935 0.86815623132643 3 R 1 -1 14.604 0.0 0.0 1.0951 0.0 0.0 1159.5184905494289 0.0 1159.5184905494289 0.0 4.146518864155125 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.0951 - 2 + 1 2.185 53567.7 1.0 613 4556 5170 HBL1_DMSO_200M_050219_1,5171 HBL1_DMSO_200M_050219_1,5171,LMHFAWCLINS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5172 24.246 390.0 209150.0 25 0 43489.0 + 4116 DAPAGRKV 8 89 407.2323283442858 812.4501037553716 2 407.2322570681572 MULTI CID FTMS 0 0 0 5170 236084.375 0.790768978267068 -31 0.4583625793457031 2 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 16.942295170755138 0.6606234159769251 3 {[DA]|[EG]}PA 4 4 43.698 0.0 0.0 5.3785 0.0 0.0 0.0 455.2730479920732 455.2730479920732 27.52697515943353 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 + {[DA]|[EG]}PA 5.3785 + + 55 + 1 2.185 69373.0 1.0 614 4556 5170 HBL1_DMSO_200M_050219_1,5172 HBL1_DMSO_200M_050219_1,5172,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5174 24.262 800.0 88900.0 25 0 4443.5 -1 0 94 526.2349217390534 2100.9105810898136 4 526.2357055544853 MULTI CID FTMS 0 0 0 5173 105789.1640625 0.2617965112443823 -4 0.04742431640625 1 3 [VS]{[CA]|SS}S{[SA]|[TG]}GG 9 -1 26.333 0.0 0.0 1.2534 0.0 0.0 0.0 1378.582736201395 1378.582736201395 8.529543537615186 0.0 0.0 0.0 0 0.0 2.0 0.2742275032520141 0.0 [VS]{[CA]|SS}S{[SA]|[TG]}GG 1.2534 - 400 1 2.185 66993.8 0.4799999892711639 615 4557 5173 HBL1_DMSO_200M_050219_1,5174 HBL1_DMSO_200M_050219_1,5174, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5175 24.276 800.0 105890.0 25 0 6137.8 -1 0 69 715.7121869552557 2144.114731465967 3 715.7142211794853 MULTI CID FTMS 0 0 0 5173 86492.65625 0.5034013395104661 -6 0.0935211181640625 2 3 [{I|L}V]QMR 5 -1 56.466 0.0 0.0 2.6335 0.0 0.0 0.0 1513.712741417574 1513.712741417574 40.26802492411967 0.0 0.0 0.0 0 1.424742501084005 2.0 0.0 0.0 [{I|L}V]QMR 2.6335 - 205 + 1 2.185 68877.0 0.4000000059604645 616 4557 5173 HBL1_DMSO_200M_050219_1,5175 HBL1_DMSO_200M_050219_1,5175, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5177 24.281 5.4 7407600.0 25 0 814530.0 + 28189 PQDESISFQQR 11 66 445.5506305676751 1333.6300623032253 3 445.5511047244072 MULTI CID FTMS 0 0 0 5176 7344201.0 0.6485777822090552 7 -0.17236328125 1 Unmodified _PQDESISFQQR_ REV__ENSG00000169184|ENST00000302326|MN1 4.897010918128616 0.8520435188433833 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F} + + 29.196 11.682 1.7455 2.1892 2.1892 49.006 0.0 0.0 0.0 0.0 17.169081132677704 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 2.1892 - 165 + 1 2.185 38155.3 1.0 617 4558 5176 HBL1_DMSO_200M_050219_1,5177 HBL1_DMSO_200M_050219_1,5177,PQDESISFQQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5178 24.285 201.0 364670.0 25 0 29749.0 8340 ERRDVCWSQR 10 98 334.4151883833679 1333.6316476670715 4 334.4148132205009 MULTI CID FTMS 0 0 0 5176 236058.96875 0.6711473575198771 8 -0.1800136566162109 2 Unmodified _ERRDVCWSQR_ ENSG00000168056|ENST00000301873|LTBP3;nc|ENSG00000168056|Q9NS15-2|LTBP3 9.38312468134398 0.6832340498775793 3 N{M(Oxidation (M))|F}[YG]QR 6 8 32.298 0.0 0.0 2.4218 0.0 0.0 550.2878727200742 0.0 550.2878727200742 0.0 19.53427015740305 0.0 0.0 0 0.0 0.0 0.0 0.5387254899964358 N{M(Oxidation (M))|F}[YG]QR 2.4218 - 154 + 1 2.185 62504.3 1.0 618 4558 5176 HBL1_DMSO_200M_050219_1,5178 HBL1_DMSO_200M_050219_1,5178,ERRDVCWSQR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5179 24.298 800.0 101320.0 25 0 11607.0 -1 0 60 805.7577693430527 4023.752464382264 5 806.3616821169853 MULTI CID FTMS 0 0 0 5176 100072.5859375 1.0 0 0.0 3 3 QNSST 5 -1 26.154 0.0 0.0 0.64998 0.0 0.0 2628.1399080590904 875.3766656899338 3503.516573749024 0.0 0.0 0.0 0.0 0 1.3935078169319297 0.0 0.0 0.0 QNSST 0.64998 - 45 + 1 2.185 65173.3 0.4000000059604645 619 4558 5176 HBL1_DMSO_200M_050219_1,5179 HBL1_DMSO_200M_050219_1,5179, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5180 24.312 800.0 100060.0 25 0 23866.0 -1 0 62 582.3242627162182 581.3169862496181 1 582.3239013552666 MULTI CID FTMS 0 0 0 5176 84425.109375 0.5746836808212333 -27 0.4032802581787109 4 3 KPV 3 -1 36.242 0.0 0.0 6.2345 0.0 0.0 239.09092909980623 0.0 239.09092909980623 0.0 24.023722004121453 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.4247425010840047 KPV 6.2345 - 23 1 2.185 66146.8 0.4099999964237213 620 4558 5176 HBL1_DMSO_200M_050219_1,5180 HBL1_DMSO_200M_050219_1,5180, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5182 24.317 70.0 817860.0 25 0 116260.0 + 36012 SVQHVDAAEK 10 80 361.8527598741856 1082.536450222757 3 361.8522827029228 MULTI CID FTMS 0 0 0 5181 746193.1875 0.013814896680588 78 -1.4096221923828125 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 3 [VS]AGHVDAAEK 11 2 [VS]AG + + 40.883 23.008 7.3238 3.7766 3.7766 51.96 0.0 0.0 0.0 0.0 13.927652106879536 0.0 0.0 0 0.0 0.0 0.6382104921644451 0.3054621874040891 [VS]AGHVDAAEK 3.7766 - 349 + 1 2.185 50409.8 1.0 621 4559 5181 HBL1_DMSO_200M_050219_1,5182 HBL1_DMSO_200M_050219_1,5182,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5183 24.331 800.0 31252.0 25 0 3152.3 -1 0 31 782.7508766394742 3908.718000864371 5 783.3520995974541 MULTI CID FTMS 0 0 0 5181 30983.03515625 0.4638572768973413 1 -0.0461006164550781 2 3 Y 1 -1 4.6041 0.0 0.0 0.11779 0.0 0.0 2963.283810045815 779.3269452529138 3742.6107552987287 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.11779 - 2 + 1 2.185 28063.1 0.3300000131130218 622 4559 5181 HBL1_DMSO_200M_050219_1,5183 HBL1_DMSO_200M_050219_1,5183, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5184 24.344 800.0 82477.0 25 0 6680.7 -1 0 96 701.3108846137133 2100.91082444134 3 701.6458618044853 MULTI CID FTMS 0 0 0 5181 112097.2890625 0.808770987615282 -5 0.1035823822021484 3 3 [VS]QQH 5 -1 15.618 0.0 0.0 0.74341 0.0 0.0 0.0 1518.6142905880772 1518.6142905880772 8.144052927599619 0.0 0.0 0.0 0 0.0 2.0 0.2396518287104437 0.0 [VS]QQH 0.74341 - 205 1 2.185 56055.1 0.4399999976158142 623 4559 5181 HBL1_DMSO_200M_050219_1,5184 HBL1_DMSO_200M_050219_1,5184, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5185 24.358 800.0 17269.0 25 0 1373.5 -1 0 27 800.3570100956971 3996.748668145485 5 800.7591430544853 MULTI CID FTMS 0 0 0 5181 76881.4453125 1.0 0 0.0 4 3 P 1 -1 1.9897 0.0 0.0 0.049783 0.0 0.0 3100.3468259597416 796.3255098932249 3896.672335852967 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.049783 - 2 + 1 2.185 17347.5 0.3499999940395355 624 4559 5181 HBL1_DMSO_200M_050219_1,5185 HBL1_DMSO_200M_050219_1,5185, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5187 24.375 754.0 105090.0 25 0 8052.7 9802 FPANYAEK 8 103 470.2301883217317 938.4458237102632 2 470.2299682497978 MULTI CID FTMS 0 0 0 5186 102094.453125 0.3579363876808938 11 -0.1356792449951172 1 Unmodified _FPANYAEK_ CON__ENSEMBL:ENSBTAP00000001528;ENSG00000205726|ENST00000381318|ITSN1;nc|ENSG00000205726|Q15811-10|ITSN1;nc|ENSG00000205726|Q15811-11|ITSN1;nc|ENSG00000205726|Q15811-12|ITSN1;nc|ENSG00000205726|Q15811-13|ITSN1;nc|ENSG00000205726|Q15811-2|ITSN1;nc|ENSG00000205726|Q15811-3|ITSN1;nc|ENSG00000205726|Q15811-4|ITSN1;nc|ENSG00000205726|Q15811-5|ITSN1;nc|ENSG00000205726|Q15811-6|ITSN1;nc|ENSG00000205726|Q15811-7|ITSN1;nc|ENSG00000205726|Q15811-8|ITSN1;nc|ENSG00000205726|Q15811-9|ITSN1 26.88365393820708 0.4786498634179528 3 HVDAAEK 7 5 70.914 0.0 0.0 7.5565 0.0 0.0 170.0694075309513 0.0 170.0694075309513 0.0 41.5281059577009 0.0 0.0 0 2.504432191740108 0.0 0.6139829889124311 0.3054621874040891 HVDAAEK 7.5565 - 478 + 1 2.183 69527.9 1.0 625 4560 5186 HBL1_DMSO_200M_050219_1,5187 HBL1_DMSO_200M_050219_1,5187,FPANYAEK False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 5189 24.38 21.0 1026800.0 25 0 84554.0 -1 0 42 537.036285078664 2144.116034448256 4 537.2869750857353 MULTI CID FTMS 0 0 0 5188 1882954.0 0.9389440224474438 -2 0.0628833770751953 1 3 [{I|L}V]Q{M(Oxidation (M))|F} 4 -1 40.445 0.0 0.0 1.8863 0.0 0.0 0.0 1653.785859600996 1653.785859600996 24.247425010840047 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}V]Q{M(Oxidation (M))|F} 1.8863 - 23 + 1 2.183 29264.0 1.0 626 4561 5188 HBL1_DMSO_200M_050219_1,5189 HBL1_DMSO_200M_050219_1,5189, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5190 24.394 800.0 28555.0 25 0 2295.5 -1 0 57 626.2837608351938 1875.829453105781 3 626.6171142458916 MULTI CID FTMS 0 0 0 5188 82183.7265625 0.8875521840523511 -4 0.1289291381835937 2 3 SGD 3 -1 23.188 0.0 0.0 1.2361 0.0 0.0 1598.7389207344906 0.0 1598.7389207344906 0.0 11.18054082491639 0.0 0.0 0 0.0 0.0 0.0 0.0 SGD 1.2361 - 38 + 1 2.183 25822.7 0.4000000059604645 627 4561 5188 HBL1_DMSO_200M_050219_1,5190 HBL1_DMSO_200M_050219_1,5190, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5193 24.414 800.0 145720.0 25 0 11885.0 + 36023 SVQHVDAAEK 10 111 542.2752825054115 1082.536012077623 2 542.2754394412041 MULTI CID FTMS 0 0 0 5192 201156.703125 0.7266809270562783 -6 0.151529312133789 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 81.92315094803507 0.0154917182261583 3 [VS]QHVDAAEK 10 0 + 117.14 0.0 0.0 10.821 10.821 94.712 0.0 0.0 0.0 11.46511290590442 11.46511290590442 11.46511290590442 9.164539485499262 0 3.309894379144197 2.0 0.8807196863200843 0.7887254899964358 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]QHVADAEK;[VS]AGHVDAAEK;[VS][AG]HVADAEK;[VS]AGHVWAAW;[VS]AGHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]QHVWAAW;[VS]QHVDAAA[VS] 10.821;9.9741;9.7826;9.7616;8.9361;8.4848;8.3633;7.8192;7.5586;7.4297 +;-;-;-;-;-;-;-;-;- + 3583 + 1 2.183 90373.5 0.75 628 4563 5192 HBL1_DMSO_200M_050219_1,5193 HBL1_DMSO_200M_050219_1,5193,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5194 24.428 800.0 60709.0 25 0 3166.2 -1 0 76 938.9224607702974 1875.8303686073948 2 938.9216796755792 MULTI CID FTMS 0 0 0 5192 106573.609375 0.6490290937405766 -4 0.0854835510253906 2 3 {[QD]|[EN]|[WG]|[KD]|[RS]}EQKK[WR]NEEQSGD 15 -1 {[QD]|[EN]|[WG]|[KD]|[RS]}EQKK[WR]NE + + 37.779 11.941 0.89002 2.014 2.014 48.854 0.0 0.0 0.0 0.0 21.80986665817912 0.0 0.0 0 1.0 0.0 0.7302046884880937 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}EQKK[WR]NEEQSGD 2.014 - 469 + 1 2.183 37096.9 0.4900000095367431 629 4563 5192 HBL1_DMSO_200M_050219_1,5194 HBL1_DMSO_200M_050219_1,5194, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5195 24.442 800.0 27945.0 25 0 2103.4 + -1 RLVRRVCERWL 11 28 771.9466384452722 0 772.1512939333916 PEAK CID FTMS 0 0 0 5192 24021.318359375 0.3894798667696673 -6 0.151529312133789 3 Carbamidomethyl (C) _RLVRRVC(Carbamidomethyl (C))ERWL_ REV__ENSG00000167196|ENST00000308275|FBXO22;REV__ENST00000565131.5_1_15:76196304-76197948:+|nuORF;REV__nc|ENSG00000167196|Q8NEZ5-3|FBXO22 0.2690200627634905 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.183 25137.4 0.4399999976158142 630 4563 5192 HBL1_DMSO_200M_050219_1,5195 HBL1_DMSO_200M_050219_1,5195,RLVRRVCERWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5197 24.449 248.0 318510.0 25 0 22478.0 + 38387 TRATPSAAFL 10 104 345.5270304964741 1033.5592620896225 3 345.5271179080009 MULTI CID FTMS 0 0 0 5196 257745.453125 0.0541809064851537 29 -0.4361400604248047 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 11.494710602746466 0.654671931888957 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 16.995 0.0 0.0 1.6443 0.0 0.0 0.0 601.3028066490559 601.3028066490559 1.1299091935965286 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.6443 + + 205 1 2.183 73621.8 1.0 631 4564 5196 HBL1_DMSO_200M_050219_1,5197 HBL1_DMSO_200M_050219_1,5197,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5199 24.453 14.0 1641400.0 25 0 107420.0 -1 0 55 429.8303971257711 2144.115603295856 5 430.0309020876884 MULTI CID FTMS 0 0 0 5198 2174785.75 0.9474174015683372 5 -0.0416030883789062 1 3 KE 2 -1 16.198 0.0 0.0 0.75546 0.0 0.0 1868.9681556413616 0.0 1868.9681556413616 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 KE 0.75546 - 52 + 1 2.183 31039.6 1.0 632 4565 5198 HBL1_DMSO_200M_050219_1,5199 HBL1_DMSO_200M_050219_1,5199, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5200 24.454 44.0 921660.0 25 0 129330.0 + 6235 DTNADKQLS 9 68 496.2382529460117 990.4619529588234 2 496.2381469607353 MULTI CID FTMS 0 0 0 5198 1607499.375 0.7982017859865008 -30 0.4859333038330078 2 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 73.1962812333195 0.0198633909068982 3 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S 9 0 + 73.893 0.0 0.0 7.4604 7.4604 92.046 0.0 0.0 0.0 4.628618393527404 39.52434946187526 4.628618393527404 9.208187539523747 0 2.548455006504028 0.0 1.2059771852360797 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S;{[QG]|[NA]}DTDKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S;{[QG]|[NA]}DTDK[AG]{I|L}S 7.4604;6.5307;6.5307;5.8892;5.6054;4.9596 +;-;-;-;-;- + 526 1 2.183 35876.5 1.0 633 4565 5198 HBL1_DMSO_200M_050219_1,5200 HBL1_DMSO_200M_050219_1,5200,DTNADKQLS True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5201 24.456 79.0 665830.0 25 0 70337.0 36099 SVRSPTPYKK 10 84 388.225323438154 1161.654140914662 3 388.2251464724541 MULTI CID FTMS 0 0 0 5198 658059.625 0.6867819179034699 2 -0.0175342559814453 3 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 10.799506525563784 0.666336781075408 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 30.041 13.456 3.1348 2.5861 2.5861 49.511 0.0 0.0 0.0 0.0 18.31964878672025 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 2.5861 - 117 + 1 2.183 56616.6 1.0 634 4565 5198 HBL1_DMSO_200M_050219_1,5201 HBL1_DMSO_200M_050219_1,5201,SVRSPTPYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5203 24.466 422.0 206180.0 25 0 29549.0 -1 IRAPTTMK 8 105 467.262754620649 0 467.2625915408134 PEAK CID FTMS 0 0 0 5202 201684.28125 0.5705056427833376 4 -0.0339527130126953 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 22.736283301280096 0.3662555986329114 3 KTT 3 -1 33.672 0.0 0.0 3.6109 0.0 0.0 63.99786222096106 535.3002283335768 599.2980905545379 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.424742501084005 0.0 KTT 3.6109 - 102 + 1 2.183 75080.0 1.0 635 4566 5202 HBL1_DMSO_200M_050219_1,5203 HBL1_DMSO_200M_050219_1,5203,IRAPTTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5207 24.49 800.0 37002.0 25 0 3485.1 -1 0 37 754.5461486488475 0 754.5477172732353 PEAK CID FTMS 0 0 0 -1 0 1 3 Q 1 -1 9.732 0.0 0.0 0.64575 0.0 0.0 625.6732166318762 750.3178804986936 1375.99109713057 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Q 0.64575 - 1 + 1 2.183 32903.3 0.5 636 4569 5206 HBL1_DMSO_200M_050219_1,5207 HBL1_DMSO_200M_050219_1,5207, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5210 24.504 408.0 226840.0 25 0 49592.0 + 4117 DAPAGRKV 8 91 407.2323283442858 812.4501037553716 2 407.2322875857353 MULTI CID FTMS 0 0 0 5209 179420.21875 0.6009713394263866 -16 0.2632770538330078 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 16.942295170755138 0.6606234159769251 3 DAPA 4 4 53.175 0.0 0.0 6.5451 0.0 0.0 0.0 455.2732698112424 455.2732698112424 37.40031912114908 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + DAPA 6.5451 + + 43 + 1 2.183 76966.4 1.0 637 4571 5209 HBL1_DMSO_200M_050219_1,5210 HBL1_DMSO_200M_050219_1,5210,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5211 24.517 800.0 34293.0 25 0 2445.5 -1 0 48 946.9989251012104 4729.958243173051 5 947.6013671755792 MULTI CID FTMS 0 0 0 5209 78627.46875 1.0 0 0.0 2 3 N 1 -1 6.9897 0.0 0.0 0.14778 0.0 0.0 3668.502018663089 944.3739107721312 4612.87592943522 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.14778 - 8 + 1 2.183 28667.6 0.449999988079071 638 4571 5209 HBL1_DMSO_200M_050219_1,5211 HBL1_DMSO_200M_050219_1,5211, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5213 24.533 688.0 40255.0 25 0 2309.3 -1 0 63 526.2349217390534 2100.9105810898136 4 526.4854003787041 MULTI CID FTMS 0 0 0 5212 64110.91015625 0.1192788719762236 11 -0.250040054321289 1 3 [VS]{[CA]|SS}S 5 -1 19.321 0.0 0.0 0.91967 0.0 0.0 0.0 1650.6998016310824 1650.6998016310824 12.331655954731248 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]{[CA]|SS}S 0.91967 - 155 1 2.189 30172.3 1.0 639 4572 5212 HBL1_DMSO_200M_050219_1,5213 HBL1_DMSO_200M_050219_1,5213, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5214 24.543 575.0 116550.0 25 0 6425.6 -1 0 53 715.7121869552557 2144.114731465967 3 715.7114135622978 MULTI CID FTMS 0 0 0 5212 100720.3828125 0.5862090242351579 9 -0.2173881530761718 2 3 V{I|L}QMRAAHKK{M(Oxidation (M))|F} 11 -1 85.464 0.0 0.0 3.986 0.0 0.0 0.0 831.3414400690061 831.3414400690061 59.49533589390239 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 V{I|L}QMRAAHKK{M(Oxidation (M))|F} 3.986 - 180 + 1 2.189 61172.9 1.0 640 4572 5212 HBL1_DMSO_200M_050219_1,5214 HBL1_DMSO_200M_050219_1,5214, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5215 24.557 800.0 92062.0 25 0 10326.0 + 34853 SQGFSHSQM 9 111 512.7109958984765 1023.4074388637532 2 512.7107421755791 MULTI CID FTMS 0 0 0 5212 85323.1484375 0.0117733894426453 -24 0.3764972686767578 3 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 74.19965305603844 0.0194755241623067 3 {[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F} 9 0 + 73.189 0.0 0.0 7.1515 7.1515 87.242 0.0 0.0 0.0 5.407300390241687 5.407300390241687 5.407300390241687 5.407300390241687 0 1.5 1.154901959985743 0.3252574989159953 1.035666875892183 + + {[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHS[AG]{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}[YQ]HSQ{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[TA]GN{M(Oxidation (M))|F};{[SA]|[TG]}GG{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 7.1515;6.6231;5.7234;5.6486;5.2398;5.2141;5.0023;4.7436;4.5131;4.3774 +;-;-;-;-;-;-;-;-;- + 1047 + 1 2.189 62640.0 0.4000000059604645 641 4572 5212 HBL1_DMSO_200M_050219_1,5215 HBL1_DMSO_200M_050219_1,5215,SQGFSHSQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5216 24.571 800.0 41432.0 25 0 4161.2 -1 0 49 677.3193495553327 2705.2482923549305 4 677.5708495974541 MULTI CID FTMS 0 0 0 5212 67321.6171875 1.0 0 0.0 4 3 T 1 -1 19.292 0.0 0.0 0.71312 0.0 0.0 356.1693592755875 2245.0082465387773 2601.1776058143646 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 T 0.71312 - 39 1 2.189 36381.7 0.3499999940395355 642 4572 5212 HBL1_DMSO_200M_050219_1,5216 HBL1_DMSO_200M_050219_1,5216, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5219 24.579 106.0 561160.0 25 0 65903.0 + 36013 SVQHVDAAEK 10 91 361.8527598741856 1082.536450222757 3 361.8522216677666 MULTI CID FTMS 0 0 0 5218 437953.125 0.0081081913828323 93 -1.8597545623779297 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 3 HVDAAEK 7 3 36.649 0.0 0.0 3.3855 0.0 0.0 314.1615442386058 0.0 314.1615442386058 0.0 13.673362959118409 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.3252574989159953 + HVDAAEK 3.3855 + + 363 + 1 2.189 55351.2 1.0 643 4574 5218 HBL1_DMSO_200M_050219_1,5219 HBL1_DMSO_200M_050219_1,5219,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5220 24.593 800.0 84426.0 25 0 7059.5 -1 0 44 749.9344806933273 3744.636021133636 5 750.3378173708916 MULTI CID FTMS 0 0 0 5218 51820.10546875 0.4930964364589215 -4 0.0846843719482421 2 3 HE 2 -1 12.078 0.0 0.0 0.32255 0.0 0.0 3114.387926506486 361.1325472467407 3475.5204737532267 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 HE 0.32255 - 6 + 1 2.189 54010.3 0.5299999713897705 644 4574 5218 HBL1_DMSO_200M_050219_1,5220 HBL1_DMSO_200M_050219_1,5220, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5223 24.613 800.0 142730.0 25 0 34081.0 -1 0 96 582.3242627162182 581.3169862496181 1 582.3237182497978 MULTI CID FTMS 0 0 0 5222 88639.75 0.6033728374672173 -9 0.1309757232666015 1 3 KPV 3 -1 36.867 0.0 0.0 6.342 0.0 0.0 239.0906544416032 0.0 239.0906544416032 0.0 23.13465298183695 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3807196863200844 KPV 6.342 - 48 1 2.189 90409.3 0.5600000023841858 645 4576 5222 HBL1_DMSO_200M_050219_1,5223 HBL1_DMSO_200M_050219_1,5223, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5224 24.627 800.0 43695.0 25 0 3750.6 -1 0 30 776.1479036985199 0 776.1486083865166 PEAK CID FTMS 0 0 0 5222 59228.71484375 1.0 0 0.0 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.189 34969.1 0.4300000071525574 646 4576 5222 HBL1_DMSO_200M_050219_1,5224 HBL1_DMSO_200M_050219_1,5224, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5227 24.636 51.0 625680.0 25 0 57219.0 -1 0 56 537.036285078664 2144.116034448256 4 537.2870361208916 MULTI CID FTMS 0 0 0 5226 1128592.125 0.5627778636918418 15 -0.2466773986816406 1 3 [{I|L}V]QMR 5 -1 47.703 0.0 0.0 2.2248 0.0 0.0 0.0 1513.7157631740763 1513.7157631740763 31.505149978319903 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [{I|L}V]QMR 2.2248 - 61 + 1 2.189 35885.4 1.0 647 4578 5226 HBL1_DMSO_200M_050219_1,5227 HBL1_DMSO_200M_050219_1,5227, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5228 24.649 800.0 152160.0 25 0 9378.8 + 5110 DIDHNKKID 9 151 366.5250199435369 1096.5532304308106 3 366.5237914919853 MULTI CID FTMS 0 0 0 5226 88659.0 0.3562564547504609 -13 0.1825122833251953 2 Unmodified _DIDHNKKID_ CON__P20930;ENSG00000143631|ENST00000368799|FLG 22.65808497894818 0.2428932432760099 3 {NN|[MP]|[D{I|L}]|[EV]}DHNKK{I|L}D 9 0 + 51.56 0.0 0.0 4.702 4.702 78.564 0.0 0.0 0.0 27.14764271519251 4.648867983026506 4.648867983026506 4.648867983026506 0 0.5891368308784531 2.0 1.0138793319624575 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}DHNKK{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}DHNKKEV;{NN|[MP]|[D{I|L}]|[EV]}DHNKKD{I|L};{NN|[MP]|[D{I|L}]|[EV]}DHGGKK{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}DHGGKKEV;{NN|[MP]|[D{I|L}]|[EV]}DHGGKKD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}V]K[{M(Oxidation (M))|F}T]{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}V]K[{M(Oxidation (M))|F}T]EV;{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}V]K[{M(Oxidation (M))|F}T]D{I|L};{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}K{I|L}D{NN|[MP]|[D{I|L}]|[EV]} 4.702;4.278;4.1698;3.8622;3.4383;3.33;2.4441;2.0201;1.9119;0.88507 +;-;-;-;-;-;-;-;-;- + 178 + 1 2.189 99931.0 0.5400000214576721 648 4578 5226 HBL1_DMSO_200M_050219_1,5228 HBL1_DMSO_200M_050219_1,5228,DIDHNKKID False True DIDHNKKID 24.649428 366.523791491985 1501266.375 5226.0 P20930;;ENSG00000143631|ENST00000368799|FLG 4.45048451423645 3.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 5229 24.663 800.0 27678.0 25 0 1956.8 -1 0 33 746.1261929560707 3725.594582447353 5 746.5281249880791 MULTI CID FTMS 0 0 0 5226 78079.3984375 1.0 0 0.0 3 3 A 1 -1 3.9794 0.0 0.0 0.10681 0.0 0.0 3161.352957546765 490.1698397272094 3651.522797273975 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.10681 - 10 + 1 2.189 24949.6 0.4900000095367431 649 4578 5226 HBL1_DMSO_200M_050219_1,5229 HBL1_DMSO_200M_050219_1,5229, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5230 24.677 800.0 41420.0 25 0 1983.4 -1 0 91 633.6212651710011 1897.841966113204 3 633.6207763552666 MULTI CID FTMS 0 0 0 5226 75490.3671875 0.8851583136901557 -1 0.0039596557617187 4 3 QSGY[QT]DH 8 -1 18.752 0.0 0.0 0.98808 0.0 0.0 963.465331446991 0.0 963.465331446991 0.0 5.16875291621567 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.5 QSGY[QT]DH 0.98808 - 480 + 1 2.189 33948.8 0.5 650 4578 5226 HBL1_DMSO_200M_050219_1,5230 HBL1_DMSO_200M_050219_1,5230, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5232 24.687 362.0 146370.0 25 0 9942.7 + 36024 SVQHVDAAEK 10 83 542.2748906673303 1082.5352284014605 2 542.2754394412041 MULTI CID FTMS 0 0 0 5231 180975.078125 0.7747962936304366 -6 0.1061439514160156 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 3 [VS]QHVDAAEK 10 0 + 103.02 0.0 0.0 9.5164 9.5164 94.293 0.0 0.0 0.0 80.04706474713088 15.924530016037709 15.924530016037709 9.164539485499262 0 2.721848749616356 2.0 0.8807196863200843 0.7887254899964358 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVWAAW;[VS]AGHVDAAA[VS];[VS]QHVWAAW;[VS]QHVDAAA[VS];WQH{[RE]|[WV]}AEK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[VS]AGHA{[RE]|[WV]}AW;[VS]AGHVD[DV]GK 9.5164;8.6698;7.6046;7.3204;6.719;6.4275;6.3487;6.2082;5.8289;5.7394 +;-;-;-;-;-;-;-;-;- + 1285 + 1 2.189 48936.0 1.0 651 4579 5231 HBL1_DMSO_200M_050219_1,5232 HBL1_DMSO_200M_050219_1,5232,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5233 24.701 800.0 73222.0 25 0 2321.6 -1 0 85 730.3261966810071 2917.275680857628 4 730.5779907107353 MULTI CID FTMS 0 0 0 5231 90818.5703125 1.0 0 0.0 2 3 S{[QG]|[NA]}AN 5 -1 34.125 0.0 0.0 1.1697 0.0 0.0 399.13477528774575 2057.92195298155 2457.056728269296 0.0 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.0 1.6549471895720984 S{[QG]|[NA]}AN 1.1697 - 501 + 1 2.189 50714.0 0.4199999868869781 652 4579 5231 HBL1_DMSO_200M_050219_1,5233 HBL1_DMSO_200M_050219_1,5233, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5234 24.715 800.0 63374.0 25 0 4006.3 -1 0 55 725.7235333794325 3623.581284564162 5 725.9258300662041 MULTI CID FTMS 0 0 0 5231 63012.92578125 0.3345900772411008 -3 0.0801258087158203 3 3 {M(Oxidation (M))|F}[HQ] 3 -1 8.9524 0.0 0.0 0.24706 0.0 0.0 3193.3888539995123 0.0 3193.3888539995123 0.0 1.962724883926656 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[HQ] 0.24706 - 35 + 1 2.189 44804.6 0.3700000047683716 653 4579 5231 HBL1_DMSO_200M_050219_1,5234 HBL1_DMSO_200M_050219_1,5234, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5235 24.728 800.0 15488.0 25 0 2224.5 30546 REMERFLSDYG 11 30 701.8245806595631 0 702.0782348513603 PEAK CID FTMS 0 0 0 -1 0 4 Unmodified _REMERFLSDYG_ ENSG00000158062|ENST00000374222|UBXN11;ENST00000472155.5_1_1:26611834-26629395:-|nuORF;ENST00000475591.5_1_1:26611834-26629395:-|nuORF;nc|ENSG00000158062|Q5T124-2|UBXN11;nc|ENSG00000158062|Q5T124-4|UBXN11;nc|ENSG00000158062|Q5T124-6|UBXN11;nc|ENSG00000158062|Q5T124-7|UBXN11;nc|ENSG00000158062|Q5T124-8|UBXN11 1.1933415558491238 0.4761840153648598 3 M 1 10 3.4949 0.0 0.0 0.24934 0.0 0.0 748.3489771376825 519.2175387018186 1267.566515839501 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 0.24934 + + 1 + 1 2.189 16898.0 0.3700000047683716 654 4579 5231 HBL1_DMSO_200M_050219_1,5235 HBL1_DMSO_200M_050219_1,5235,REMERFLSDYG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5237 24.733 34.0 1127600.0 25 0 142910.0 + 6236 DTNADKQLS 9 65 496.2382529460117 990.4619529588234 2 496.2380859255791 MULTI CID FTMS 0 0 0 5236 1674051.375 0.8312480975976475 -15 0.2799339294433594 1 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 57.24910588100465 0.0276051374632116 3 EN[WK]Q{I|L}S 7 4 36.942 0.0 0.0 3.7297 0.0 0.0 87.03257186103671 0.0 87.03257186103671 0.0 6.7469727149764935 0.0 0.0 0 1.4049471895720984 0.0 1.2302046884880935 0.0 EN[WK]Q{I|L}S 3.7297 - 174 1 2.189 38981.9 1.0 655 4580 5236 HBL1_DMSO_200M_050219_1,5237 HBL1_DMSO_200M_050219_1,5237,DTNADKQLS True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5238 24.735 79.0 607870.0 25 0 64148.0 36100 SVRSPTPYKK 10 69 388.225323438154 1161.654140914662 3 388.2250244021416 MULTI CID FTMS 0 0 0 5236 531116.5625 0.5542981784120977 17 -0.2846736907958984 2 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 20.41453444215458 0.5050059513928961 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 45.6 11.911 2.775 3.9255 3.9255 52.33 0.0 0.0 0.0 0.0 35.02700134235396 0.0 0.0 0 0.8807196863200843 0.0 0.7614393726401688 0.1923877696554315 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 3.9255 - 86 + 1 2.189 48646.0 1.0 656 4580 5236 HBL1_DMSO_200M_050219_1,5238 HBL1_DMSO_200M_050219_1,5238,SVRSPTPYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5240 24.748 640.0 199420.0 25 0 10321.0 + 31601 RQTYKEPL 8 147 345.5270304964741 1033.5592620896225 3 345.5269042849541 MULTI CID FTMS 0 0 0 5239 127802.7109375 0.0268655242833542 46 -0.8715419769287109 1 Unmodified _RQTYKEPL_ REV__ENSG00000074966|ENST00000264316|TXK;REV__ENST00000510457.1_1_4:48091737-48136211:-|nuORF 8.593279151180031 0.7721714526254883 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 19.055 0.0 0.0 1.8436 0.0 0.0 0.0 601.3027518305684 601.3027518305684 5.420913000501093 0.0 0.0 0.0 0 0.0 0.0 0.5866968715561641 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.8436 - 243 1 2.189 112431.0 1.0 657 4581 5239 HBL1_DMSO_200M_050219_1,5240 HBL1_DMSO_200M_050219_1,5240,RQTYKEPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5241 24.75 54.0 755080.0 25 0 80672.0 -1 0 65 429.8303971257711 2144.115603295856 5 430.0311157107353 MULTI CID FTMS 0 0 0 5239 586593.25 0.2555417942629641 21 -0.3694877624511719 2 3 [{I|L}V]QMR{M(Oxidation (M))|F} 6 -1 42.14 0.0 0.0 1.9654 0.0 0.0 0.0 1366.6664071312805 1366.6664071312805 35.15031251017078 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}V]QMR{M(Oxidation (M))|F} 1.9654 - 168 + 1 2.189 43205.3 1.0 658 4581 5239 HBL1_DMSO_200M_050219_1,5241 HBL1_DMSO_200M_050219_1,5241, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5242 24.764 800.0 87366.0 25 0 3957.3 -1 0 53 751.3353490260591 3751.640362797296 5 751.7380859255791 MULTI CID FTMS 0 0 0 5239 62402.828125 0.4963714981379145 -7 0.1601505279541015 3 3 TQT[HT]HQQ 8 -1 19.614 0.0 0.0 0.52282 0.0 0.0 2772.1929484416423 0.0 2772.1929484416423 0.0 12.62456261857125 0.0 0.0 0 0.0 0.0 0.0 0.5 TQT[HT]HQQ 0.52282 - 175 + 1 2.189 58486.1 0.3499999940395355 659 4581 5239 HBL1_DMSO_200M_050219_1,5242 HBL1_DMSO_200M_050219_1,5242, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5250 24.792 11.0 3079400.0 25 0 438190.0 + 34854 SQGFSHSQM 9 67 512.7109958984765 1023.4074388637532 2 512.7113525271416 MULTI CID FTMS 0 0 0 5249 4732763.5 0.6530545209106212 -8 0.0589866638183593 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 51.41523569358685 0.0372669606867193 3 {[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F} 9 2 + 67.317 0.0 0.0 6.5777 6.5777 86.392 0.0 0.0 0.0 6.22486274231747 6.22486274231747 6.22486274231747 6.22486274231747 0 1.8182503180159344 1.154901959985743 0.0 0.7742275032520141 {[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};[HS][YQ]QTN{M(Oxidation (M))|F};[MT]HHHTN{M(Oxidation (M))|F};[HS][YQ][AG]TN{M(Oxidation (M))|F} 6.5777;5.9695;5.0697;4.9214;4.0164;3.7972;3.6749;2.012;1.2504;1.1069 -;-;-;-;-;-;-;-;-;- 109 + 1 2.195 32973.9 1.0 660 4588 5249 HBL1_DMSO_200M_050219_1,5250 HBL1_DMSO_200M_050219_1,5250,SQGFSHSQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5251 24.806 800.0 82120.0 25 0 4653.2 -1 0 63 725.7235333794325 3623.581284564162 5 726.3258544802666 MULTI CID FTMS 0 0 0 5249 120645.1796875 1.0 0 0.0 2 3 {M(Oxidation (M))|F}[HQ] 3 -1 13.512 0.0 0.0 0.3729 0.0 0.0 3193.3869008745123 0.0 3193.3869008745123 0.0 4.048246627886984 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {M(Oxidation (M))|F}[HQ] 0.3729 - 98 + 1 2.195 54501.5 0.5899999737739563 661 4588 5249 HBL1_DMSO_200M_050219_1,5251 HBL1_DMSO_200M_050219_1,5251, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5252 24.82 800.0 59916.0 25 0 3251.2 + -1 QSVMSCCCC 9 100 539.1672912742844 1076.3200296153686 2 539.1670410037041 MULTI CID FTMS 0 0 0 5249 109116.5625 0.7624250835413497 -8 0.0589866638183593 3 2 Carbamidomethyl (C) _QSVMSC(Carbamidomethyl (C))C(Carbamidomethyl (C))CC_ REV__ENSG00000128250|ENST00000354373|RFPL1;REV__ENSG00000128276|ENST00000249007|RFPL3;REV__nc|ENSG00000128276|O75679-2|RFPL3 1.844237919475145 0.850302753031785 3 {M(Oxidation (M))|F} 1 -1 13.979 0.0 0.0 1.2988 0.0 0.0 911.2737477323592 0.0 911.2737477323592 0.0 3.600796517029785 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2988 + + 57 + 1 2.195 42170.6 0.6200000047683716 662 4588 5249 HBL1_DMSO_200M_050219_1,5252 HBL1_DMSO_200M_050219_1,5252,QSVMSCCCC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5256 24.832 108.0 605290.0 25 0 83778.0 + 36014 SVQHVDAAEK 10 85 361.8527598741856 1082.536450222757 3 361.8521911501884 MULTI CID FTMS 0 0 0 5255 476600.96875 0.0088237111400182 110 -2.1423110961914062 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 34.221707139014875 0.2185845369562963 3 HVDAAEK 7 3 47.559 0.0 0.0 4.3933 0.0 0.0 314.1599565216573 0.0 314.1599565216573 0.0 18.56258021432572 0.0 0.0 0 0.3252574989159953 0.0 0.2887254899964357 0.3494850021680094 + HVDAAEK 4.3933 + + 317 + 1 2.195 62722.3 1.0 663 4591 5255 HBL1_DMSO_200M_050219_1,5256 HBL1_DMSO_200M_050219_1,5256,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5257 24.846 800.0 84915.0 25 0 4824.3 + -1 TNGMMSTTSC 10 121 524.6894126528756 1047.364272372551 2 524.6891357302666 MULTI CID FTMS 0 0 0 5255 88636.1484375 0.7274821645335366 -4 0.0441799163818359 2 Oxidation (M) _TNGMM(Oxidation (M))STTSC_ REV__ENST00000344876.8_1_4:138442175-138442313:-|nuORF 19.361941925380144 0.5226674314761524 3 {[QS]|[NT]}GM 4 -1 30.824 0.0 0.0 2.943 0.0 0.0 0.0 641.1880998474136 641.1880998474136 13.83446431669617 0.0 0.0 0.0 0 0.3807196863200844 0.9208187539523752 0.2614393726401688 0.2887254899964357 {[QS]|[NT]}GM 2.943 + + 480 1 2.195 55266.1 0.5400000214576721 664 4591 5255 HBL1_DMSO_200M_050219_1,5257 HBL1_DMSO_200M_050219_1,5257,TNGMMSTTSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5258 24.86 800.0 117810.0 25 0 19065.0 -1 LSCPWNLSQG 10 104 581.2729340829167 1160.5313152326332 2 581.2725097537041 MULTI CID FTMS 0 0 0 5255 107820.046875 0.9931884276891052 11 -0.2768230438232422 3 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 18.373094154950223 0.5392593366289069 3 {[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}SP[HA]{M(Oxidation (M))|F}AN 11 -1 + 55.894 0.0 0.0 4.8162 4.8162 86.145 0.0 0.0 0.0 36.36819167519288 8.278876285216903 8.278876285216903 16.152792693512403 0 1.0994850021680094 1.5228787452803376 0.4247425010840047 0.3494850021680094 {[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}SP[HA]{M(Oxidation (M))|F}AN;[{I|L}T][QT]DPSQSAN;{[DA]|[EG]}[TA]{[TV]|[{I|L}S]}PSQSAN;{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}SPD[QT]VP;{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}SP[{M(Oxidation (M))|F}V]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T][QT]DPS[AG]SAN;[AG]SP[R{I|L}]{[C(Carbamidomethyl (C))E]|[WC]}SAN;{[SA]|[TG]}GP[R{I|L}]{[C(Carbamidomethyl (C))E]|[WC]}SAN;{[QS]|[NT]}P[R{I|L}]{[C(Carbamidomethyl (C))E]|[WC]}SAN;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[VA]|[{I|L}G]}V[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SAN 4.8162;3.4244;3.3813;2.9581;2.7055;2.6378;1.6848;1.6649;1.5649;0.57494 -;-;-;-;-;-;-;-;-;- 332 + 1 2.195 78784.3 0.5899999737739563 665 4591 5255 HBL1_DMSO_200M_050219_1,5258 HBL1_DMSO_200M_050219_1,5258,LSCPWNLSQG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5259 24.874 800.0 108620.0 25 0 17334.0 + 8148 EPLSAVRPQ 9 116 498.77743737932025 995.5403218254404 2 498.7772094607353 MULTI CID FTMS 0 0 0 5255 83694.7265625 0.2846627181539293 -5 0.0481491088867187 4 Unmodified _EPLSAVRPQ_ REV__ENST00000531526.5_1_11:45944386-45945084:+|nuORF 24.020572477871973 0.2255576514309169 3 [EP]{I|L}[{I|L}P]WKN 8 -1 + 51.099 0.0 0.0 5.1328 5.1328 88.011 0.0 0.0 0.0 7.06121546620269 18.84431106417005 7.06121546620269 23.62777167646332 0 0.6307196863200843 1.3010299956639813 0.2396518287104437 0.0 [EP]{I|L}[{I|L}P]WKN;[EP]{I|L}K{[RE]|[WV]}PQ;[EP]{I|L}KT{[HG]|PP}[KS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DAA{I|L}[{I|L}P]H;DK{[RE]|[WV]}RRH;DK[RV][WR]H;[{I|L}A][WP]TA{I|L}PQ;[TP][KQ]NA{I|L}PQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV]{[NV]|[RG]}KN;[TP][W{I|L}]AA{I|L}PQ 5.1328;2.7595;2.4849;1.5965;1.5425;1.3656;1.1553;0.98363;0.4961;0.48139 -;-;-;-;-;-;-;-;-;- 399 1 2.195 70717.9 0.5199999809265137 666 4591 5255 HBL1_DMSO_200M_050219_1,5259 HBL1_DMSO_200M_050219_1,5259,EPLSAVRPQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5263 24.898 800.0 57060.0 25 0 4245.3 -1 0 43 777.1498848195805 3880.7130417649023 5 777.3528320193291 MULTI CID FTMS 0 0 0 5262 41496.18359375 0.3897723415973109 -2 0.007904052734375 1 3 N 1 -1 11.99 0.0 0.0 0.30896 0.0 0.0 1964.872202513186 1798.7870391740264 3763.6592416872127 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 N 0.30896 - 11 + 1 2.195 39916.6 0.4799999892711639 667 4594 5262 HBL1_DMSO_200M_050219_1,5263 HBL1_DMSO_200M_050219_1,5263, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5264 24.912 800.0 125980.0 25 0 7949.8 + -1 QSMMMGSQV 9 142 523.7019069123044 1045.3892608914086 2 523.7025634646416 MULTI CID FTMS 0 0 0 5262 126643.6796875 1.0 0 0.0 2 3 Oxidation (M) _QSM(Oxidation (M))M(Oxidation (M))M(Oxidation (M))GSQV_ REV__ENSG00000164190|ENST00000282516|NIPBL;REV__nc|ENSG00000164190|Q6KC79-2|NIPBL;REV__nc|ENSG00000164190|Q6KC79-3|NIPBL 19.256988751693697 0.3154191944385105 3 {[QS]|[NT]}G 3 -1 38.689 0.0 0.0 3.701 0.0 0.0 0.0 770.2542870967399 770.2542870967399 15.165324636852072 0.0 0.0 0.0 0 0.8807196863200843 0.7958800173440752 0.5356668758921829 0.6109243748081782 {[QS]|[NT]}G 3.701 - 729 1 2.195 77618.7 0.6499999761581421 668 4594 5262 HBL1_DMSO_200M_050219_1,5264 HBL1_DMSO_200M_050219_1,5264,QSMMMGSQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5266 24.919 267.0 168270.0 25 0 11788.0 -1 0 61 537.036285078664 2144.116034448256 4 537.2867919802666 MULTI CID FTMS 0 0 0 5265 233776.84375 0.1165739418093551 32 -0.6947669982910156 1 3 [{I|L}V]QM{M(Oxidation (M))|F} 5 -1 50.713 0.0 0.0 2.3652 0.0 0.0 0.0 1522.7484266769015 1522.7484266769015 35.14014361800122 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [{I|L}V]QM{M(Oxidation (M))|F} 2.3652 - 65 + 1 2.195 44379.8 1.0 669 4595 5265 HBL1_DMSO_200M_050219_1,5266 HBL1_DMSO_200M_050219_1,5266, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5267 24.932 748.0 189480.0 25 0 11434.0 + 5093 DHINKKDDL 9 165 366.5250199435369 1096.5532304308106 3 366.5241577029228 MULTI CID FTMS 0 0 0 5265 94946.4296875 0.3815210912787496 4 -0.1663780212402343 2 Unmodified _DHINKKDDL_ REV__ENSG00000166938|ENST00000319212|DIS3L;REV__ENST00000564909.5_1_15:66585934-66618751:+|nuORF;REV__nc|ENSG00000166938|Q8TF46-2|DIS3L;REV__nc|ENSG00000166938|Q8TF46-3|DIS3L;REV__nc|ENSG00000166938|Q8TF46-4|DIS3L 14.838274106304384 0.4350285940865338 3 {NN|[MP]|[D{I|L}]|[EV]}DH[R{I|L}]T{I|L}D 9 -1 + 42.672 0.0 0.0 3.8914 3.8914 77.029 0.0 0.0 0.0 19.76431293740898 5.44068044350275 5.44068044350275 5.44068044350275 0 0.1271595765414318 2.0 0.5078792628615163 0.0 {NN|[MP]|[D{I|L}]|[EV]}DH[R{I|L}]T{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}DH[R{I|L}]TD{I|L};{[YC]|[HE]}{I|L}T[R{I|L}]T{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}[YQ]{I|L}{I|L}[W{M(Oxidation (M))|F}];{[YC]|[HE]}{I|L}T[R{I|L}]TD{I|L} 3.8914;3.3953;0.7808;0.72088;0.28464 -;-;-;-;- 282 + 1 2.195 117154.7 1.0 670 4595 5265 HBL1_DMSO_200M_050219_1,5267 HBL1_DMSO_200M_050219_1,5267,DHINKKDDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5268 24.946 800.0 114750.0 25 0 9638.0 + 19202 LEGEESRMSGE 11 98 620.2607856910658 1238.5070184489316 2 620.2603027224541 MULTI CID FTMS 0 0 0 5265 124559.59375 0.4850539419097235 -2 0.0340232849121093 3 Oxidation (M) _LEGEESRM(Oxidation (M))SGE_ CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__Q7Z794;ENSG00000167768|ENST00000252244|KRT1;ENSG00000189182|ENST00000341809|KRT77 73.1962812333195 0.0231417158388345 3 {I|L}EGEES 6 5 85.795 0.0 0.0 6.9273 0.0 0.0 0.0 591.2204683893186 591.2204683893186 46.93649651354315 0.0 0.0 0.0 0 1.3494850021680094 2.0 1.416386562212267 0.0 + {I|L}EGEES 6.9273 + + 1335 + 1 2.195 74746.0 0.4900000095367431 671 4595 5265 HBL1_DMSO_200M_050219_1,5268 HBL1_DMSO_200M_050219_1,5268,LEGEESRMSGE True False LEGEESRMSGE 24.945772 620.260302722454 1598460.75 5265.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253 6.52045472462972 2.0 True 11.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 5269 24.96 800.0 86916.0 25 0 6634.6 -1 0 51 777.1498848195805 3880.7130417649023 5 777.7512695193291 MULTI CID FTMS 0 0 0 5265 97675.5234375 0.7785788707615446 -13 0.1480159759521484 4 3 YM 2 -1 18.711 0.0 0.0 0.48216 0.0 0.0 1801.8095561427983 1781.7627580469634 3583.572314189761 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 YM 0.48216 - 17 + 1 2.195 57338.3 0.4300000071525574 672 4595 5265 HBL1_DMSO_200M_050219_1,5269 HBL1_DMSO_200M_050219_1,5269, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5271 24.972 492.0 183390.0 25 0 12768.0 + 36025 SVQHVDAAEK 10 104 542.2748906673303 1082.5352284014605 2 542.2755004763603 MULTI CID FTMS 0 0 0 5270 192582.828125 0.8244917642475387 11 -0.2225608825683593 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 90.10356042845372 0.0093261538006644 3 [VS]QHVDAAEK 10 0 + 117.62 0.0 0.0 10.865 10.865 94.721 0.0 0.0 0.0 62.910266809152965 16.409080081077988 16.409080081077988 9.164539485499262 0 3.309894379144197 2.0 1.2302046884880935 0.7887254899964358 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]QHVADAEK;[VS]AGHVDAAEK;[VS][AG]HVADAEK;[VS]QK{M(Oxidation (M))|F}{M(Oxidation (M))|F}AEK;[VS]AGHVDAAA[VS];[VS]AGHVD[DV]GK;[VS][AG]K{M(Oxidation (M))|F}{M(Oxidation (M))|F}AEK;[VS]QHVDAAA[VS] 10.865;10.019;9.7892;9.3355;8.9426;8.4804;8.3296;7.6936;7.6298;7.3959 +;-;-;-;-;-;-;-;-;- + 2741 + 1 2.197 76634.4 1.0 673 4596 5270 HBL1_DMSO_200M_050219_1,5271 HBL1_DMSO_200M_050219_1,5271,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5272 24.986 800.0 117150.0 25 0 3910.2 -1 0 65 741.5357927709719 3702.642581521859 5 741.7356445193291 MULTI CID FTMS 0 0 0 5270 86305.9375 0.7425274968797426 -2 0.0778999328613281 2 3 AT 2 -1 18.698 0.0 0.0 0.50499 0.0 0.0 2693.233783855996 834.2988375299436 3527.53262138594 0.0 0.0 0.0 0.0 0 0.5 0.0 0.75 0.0 AT 0.50499 - 12 + 1 2.197 72599.1 0.4000000059604645 674 4596 5270 HBL1_DMSO_200M_050219_1,5272 HBL1_DMSO_200M_050219_1,5272, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5273 24.999 771.0 155050.0 25 0 6977.6 + -1 MPDDHARKI 9 149 366.8507081744759 1097.5302951236276 3 366.8493224978447 MULTI CID FTMS 0 0 0 5270 82501.59375 0.9707209200932868 -1 0.0478782653808593 3 Oxidation (M) _M(Oxidation (M))PDDHARKI_ nc|ENSG00000052841|Q96AE7-2|TTC17;ENSG00000052841|ENST00000039989|TTC17 17.44264345198275 0.3645313841742926 3 {NN|[MP]|[D{I|L}]|[EV]}C 3 -1 24.437 0.0 0.0 2.2265 0.0 0.0 0.0 763.4024014070839 763.4024014070839 2.4865124202832334 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}C 2.2265 - 129 1 2.197 97877.1 1.0 675 4596 5270 HBL1_DMSO_200M_050219_1,5273 HBL1_DMSO_200M_050219_1,5273,MPDDHARKI False False MPDDHARKI 24.999257 366.849322497845 2550492.25 5270.0 nc|ENSG00000052841|Q96AE7-2|TTC17;;ENSG00000052841|ENST00000039989|TTC17 3.643779655297597 3.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5274 25.013 800.0 70369.0 25 0 8213.3 -1 0 84 466.5192949673674 1862.0480740030696 4 466.7705566287041 MULTI CID FTMS 0 0 0 5270 74688.84375 1.0 0 0.0 4 3 {I|L}K 2 -1 23.003 0.0 0.0 1.2354 0.0 0.0 1602.8585731259195 0.0 1602.8585731259195 0.0 9.90417829939986 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 {I|L}K 1.2354 - 83 + 1 2.197 55396.3 0.3899999856948852 676 4596 5270 HBL1_DMSO_200M_050219_1,5274 HBL1_DMSO_200M_050219_1,5274, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5276 25.018 39.0 1013600.0 25 0 123390.0 + 6237 DTNADKQLS 9 78 496.2382529460117 990.4619529588234 2 496.2381164431572 MULTI CID FTMS 0 0 0 5275 1738975.5 0.8634860899319281 2 -0.0649833679199218 1 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 74.19965305603844 0.0194755241623067 3 {[ES]|[DT]|[{I|L}C]}NAD[KQ]{[TV]|[{I|L}S]} 9 0 + 49.204 0.0 0.0 4.9677 4.9677 84.214 0.0 0.0 0.0 3.748162098248997 28.135730727090262 3.748162098248997 9.208187539523747 0 1.774227503252014 0.0 1.2302046884880935 0.3807196863200844 + + {[ES]|[DT]|[{I|L}C]}NAD[KQ]{[TV]|[{I|L}S]};{[ES]|[DT]|[{I|L}C]}GGAD[KQ]{[TV]|[{I|L}S]};{[QG]|[NA]}DTD[KQ]{[TV]|[{I|L}S]};[AG]GDTD[KQ]{[TV]|[{I|L}S]} 4.9677;4.0381;3.2427;2.2283 +;-;-;- + 190 1 2.197 34127.1 1.0 677 4597 5275 HBL1_DMSO_200M_050219_1,5276 HBL1_DMSO_200M_050219_1,5276,DTNADKQLS True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5277 25.032 800.0 206270.0 25 0 9963.9 + 38388 TRATPSAAFL 10 183 345.5270304964741 1033.5592620896225 3 345.5269958376884 MULTI CID FTMS 0 0 0 5275 81313.75 0.017093037457272 62 -1.1952800750732422 2 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 11.494710602746466 0.654671931888957 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 16.995 0.0 0.0 1.6443 0.0 0.0 0.0 601.3027353228509 601.3027353228509 4.101806662810091 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.6443 + + 232 1 2.197 141432.6 0.5099999904632568 678 4597 5275 HBL1_DMSO_200M_050219_1,5277 HBL1_DMSO_200M_050219_1,5277,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5278 25.045 800.0 96134.0 25 0 8582.8 + -1 YSGCYMHE 8 101 531.6851482040388 1061.3557434748775 2 531.6849243044853 MULTI CID FTMS 0 0 0 5275 93490.9375 0.8367015326099116 -1 0.0535163879394531 3 Carbamidomethyl (C),Oxidation (M) _YSGC(Carbamidomethyl (C))YM(Oxidation (M))HE_ REV__ENSG00000176040|ENST00000452346|TMPRSS7;REV__nc|ENSG00000176040|Q7RTY8-2|TMPRSS7;REV__nc|ENSG00000176040|Q7RTY8-3|TMPRSS7 5.230669730166228 0.792582437072536 3 P 1 -1 10.181 0.0 0.0 0.95925 0.0 0.0 946.291997907786 0.0 946.291997907786 0.0 0.3481796407069737 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.95925 - 37 + 1 2.197 67069.4 0.4300000071525574 679 4597 5275 HBL1_DMSO_200M_050219_1,5278 HBL1_DMSO_200M_050219_1,5278,YSGCYMHE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5280 25.05 10.0 3539400.0 25 0 451700.0 + 34855 SQGFSHSQM 9 65 512.7109958984765 1023.4074388637532 2 512.7114135622978 MULTI CID FTMS 0 0 0 5279 5287552.0 0.7296074984837077 2 -0.036355972290039 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 59.36838082759317 0.0264317782606298 3 {[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F} 9 2 + 64.848 0.0 0.0 6.3365 6.3365 82.909 0.0 0.0 0.0 3.667053245199625 3.667053245199625 3.667053245199625 3.667053245199625 0 1.8182503180159344 1.0969100130080565 0.7614393726401688 0.0 {[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]SW{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}{[QS]|[NT]} 6.3365;5.9782;5.0784;5.0037;5.0022;4.786;4.2844;4.0987;3.8932;3.8862 -;-;-;-;-;-;-;-;-;- 121 + 1 2.197 34414.7 1.0 680 4598 5279 HBL1_DMSO_200M_050219_1,5280 HBL1_DMSO_200M_050219_1,5280,SQGFSHSQM True False SQGFSHSQM 25.049975 512.711413562298 516815296.0 5279.0 ENSG00000181143|ENST00000397910|MUC16 10.396236737569174 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5281 25.064 800.0 51676.0 25 0 2148.8 -1 0 62 768.7420707398056 3838.673971366028 5 768.9445678591728 MULTI CID FTMS 0 0 0 5279 103273.9375 0.8318471769657415 -7 0.2177715301513672 2 3 SG{[QG]|[NA]}A 5 -1 12.218 0.0 0.0 0.3183 0.0 0.0 1067.4664534901178 2368.019722188415 3435.486175678533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SG{[QG]|[NA]}A 0.3183 - 38 + 1 2.197 37084.2 0.4399999976158142 681 4598 5279 HBL1_DMSO_200M_050219_1,5281 HBL1_DMSO_200M_050219_1,5281, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5282 25.078 800.0 140760.0 25 0 3369.4 -1 0 109 751.335595207438 3751.6415937041897 5 751.5347167849541 MULTI CID FTMS 0 0 0 5279 105918.453125 0.3570369682932081 -5 0.1676845550537109 3 3 SSG{[QG]|[NA]}AA 7 -1 44.653 0.0 0.0 1.1902 0.0 0.0 980.431896706354 2209.94535971231 3190.3772564186643 0.0 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.7614393726401688 SSG{[QG]|[NA]}AA 1.1902 - 1127 + 1 2.197 83500.4 0.4300000071525574 682 4598 5279 HBL1_DMSO_200M_050219_1,5282 HBL1_DMSO_200M_050219_1,5282, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5285 25.086 105.0 676620.0 25 0 94464.0 + 36015 SVQHVDAAEK 10 90 361.8527598741856 1082.536450222757 3 361.8522216677666 MULTI CID FTMS 0 0 0 5284 599486.75 0.011098798074502 119 -2.179136276245117 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 34.221707139014875 0.2185845369562963 3 HVDAAEK 7 3 40.934 0.0 0.0 3.7814 0.0 0.0 314.1593115087049 0.0 314.1593115087049 0.0 13.17532531436136 0.0 0.0 0 0.3252574989159953 0.0 0.3252574989159953 0.3494850021680094 + HVDAAEK 3.7814 + + 488 + 1 2.197 64578.9 1.0 683 4600 5284 HBL1_DMSO_200M_050219_1,5285 HBL1_DMSO_200M_050219_1,5285,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5286 25.1 800.0 38699.0 25 0 2606.7 -1 0 55 725.7233747686583 3623.580491510292 5 725.9224731326103 MULTI CID FTMS 0 0 0 5284 54037.33984375 0.1310516749987646 -8 0.2079429626464843 2 3 A 1 -1 5.4846 0.0 0.0 0.15136 0.0 0.0 1397.5965123843428 2151.921158353989 3549.5176707383325 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.15136 - 10 + 1 2.197 31449.9 0.449999988079071 684 4600 5284 HBL1_DMSO_200M_050219_1,5286 HBL1_DMSO_200M_050219_1,5286, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5289 25.121 800.0 42663.0 25 0 2463.1 -1 0 64 926.430261728444 1850.845970523688 2 926.9318115115166 MULTI CID FTMS 0 0 0 5288 97502.8828125 0.7292737244485644 -3 0.0263347625732421 1 3 {[QS]|[NT]}GGNS[WK][MT]{I|L}NSNG[RD] 17 -1 {[QS]|[NT]}GGNS[WK][MT]{I|L} + + 30.155 13.064 1.0982 1.6293 1.6293 48.604 0.0 0.0 0.0 0.0 12.530834337684308 0.0 0.0 0 0.0 0.0 0.0 1.579689690656103 {[QS]|[NT]}GGNS[WK][MT]{I|L}NSNG[RD] 1.6293 - 855 + 1 2.197 31004.9 0.5199999809265137 685 4602 5288 HBL1_DMSO_200M_050219_1,5289 HBL1_DMSO_200M_050219_1,5289, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5291 25.13 417.0 115030.0 25 0 22250.0 + 8178 EPRKELPQ 8 68 498.77743737932025 995.5403218254404 2 498.7770263552666 MULTI CID FTMS 0 0 0 5290 135871.03125 0.4621248991729444 7 -0.11370849609375 1 Unmodified _EPRKELPQ_ REV__ENST00000610085.1_1_7:148395177-148395648:-|nuORF 28.486842064014134 0.4448922141344407 3 [EP]{I|L}[QT]A{I|L}K 8 -1 46.15 0.0 0.0 4.6357 0.0 0.0 0.0 112.00531366182 112.00531366182 29.635176304087967 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3252574989159953 0.9247425010840048 [EP]{I|L}[QT]A{I|L}K 4.6357 - 66 1 2.197 43328.2 1.0 686 4603 5290 HBL1_DMSO_200M_050219_1,5291 HBL1_DMSO_200M_050219_1,5291,EPRKELPQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5292 25.144 800.0 69141.0 25 0 7115.7 -1 0 39 938.9156703557844 0 938.9127075076104 PEAK CID FTMS 0 0 0 5290 66190.234375 1.0 0 0.0 2 3 E 1 -1 4.6041 0.0 0.0 0.24544 0.0 0.0 1012.450101842625 731.2895601861936 1743.7396620288189 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.24544 - 8 + 1 2.197 46560.5 0.3400000035762787 687 4603 5290 HBL1_DMSO_200M_050219_1,5292 HBL1_DMSO_200M_050219_1,5292, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5295 25.164 800.0 27900.0 25 0 3604.2 -1 0 53 676.3072539343377 2025.899932403213 3 676.3076049685478 MULTI CID FTMS 0 0 0 -1 0 1 3 W 1 -1 12.764 0.0 0.0 0.63005 0.0 0.0 1821.809995124696 0.0 1821.809995124696 0.0 8.160116073527028 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.63005 - 15 + 1 2.197 26809.0 0.5299999713897705 688 4605 5294 HBL1_DMSO_200M_050219_1,5295 HBL1_DMSO_200M_050219_1,5295, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5296 25.178 800.0 21609.0 25 0 1732.2 -1 0 50 643.6249324689834 1927.85296800715 3 643.9579955935478 MULTI CID FTMS 0 0 0 5294 73159.9453125 1.0 0 0.0 2 3 Q 1 -1 6.9897 0.0 0.0 0.36256 0.0 0.0 1010.4994046300002 786.2722872369749 1796.771691866975 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.36256 - 19 + 1 2.197 29278.5 0.5099999904632568 689 4605 5294 HBL1_DMSO_200M_050219_1,5296 HBL1_DMSO_200M_050219_1,5296, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5299 25.192 429.0 245980.0 25 0 14569.0 + 4295 DARHNVSRV 9 119 351.85648255197094 1052.5476182561129 3 351.8561584353447 MULTI CID FTMS 0 0 0 5298 223774.765625 0.1351187558645616 -4 0.0615215301513671 1 Unmodified _DARHNVSRV_ ENSG00000198876|ENST00000361264|DCAF12 30.43146612281011 0.143988730116972 3 [KC][{M(Oxidation (M))|F}T]NVVRS 9 6 + 38.796 0.0 0.0 3.6859 3.6859 76.237 0.0 0.0 0.0 24.367357689447225 3.371648711213816 3.371648711213816 5.101726964086311 0 0.9247425010840048 0.0 0.4247425010840047 0.3054621874040891 [KC][{M(Oxidation (M))|F}T]NVVRS;[KC][{M(Oxidation (M))|F}T]NVVSR;[KC][{M(Oxidation (M))|F}T]VNVRS;[KC][{M(Oxidation (M))|F}T]GGVVRS;[KC][{M(Oxidation (M))|F}T]NVSVR;[KC][{M(Oxidation (M))|F}T]NVSRV;[KC][{M(Oxidation (M))|F}T]VNVSR;[KC][{M(Oxidation (M))|F}T]GGVVSR;[KC][{M(Oxidation (M))|F}T]VGGVRS;[KC][{M(Oxidation (M))|F}T]VNSVR 3.6859;3.2012;2.8576;2.8111;2.5806;2.5521;2.3729;2.3263;1.9827;1.7523 -;-;-;-;-;-;-;-;-;- 513 + 1 2.197 91333.4 1.0 690 4607 5298 HBL1_DMSO_200M_050219_1,5299 HBL1_DMSO_200M_050219_1,5299,DARHNVSRV False True DARHNVSRV 25.192147 351.856158435345 16508270.625 5298.0 ENSG00000198876|ENST00000361264|DCAF12 6.745984236399333 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5300 25.206 800.0 73364.0 25 0 12861.0 -1 0 42 677.9125483605218 3384.526359469609 5 678.1125366091728 MULTI CID FTMS 0 0 0 5298 71546.125 1.0 0 0.0 2 3 H 1 -1 10.044 0.0 0.0 0.29677 0.0 0.0 455.1978328279591 2789.2422734298407 3244.4401062578 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 H 0.29677 - 4 + 1 2.197 49167.8 0.5 691 4607 5298 HBL1_DMSO_200M_050219_1,5300 HBL1_DMSO_200M_050219_1,5300, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5303 25.221 395.0 316820.0 25 0 13038.0 -1 0 73 742.9328846139639 3709.62804073682 5 743.1342040896416 MULTI CID FTMS 0 0 0 5302 252954.8125 0.5260680940545895 -1 0.0037212371826171 1 3 SSSG 4 -1 23.047 0.0 0.0 0.62129 0.0 0.0 2569.145693179982 819.3487032525999 3388.494396432582 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 SSSG 0.62129 - 101 + 1 2.202 93120.9 1.0 692 4609 5302 HBL1_DMSO_200M_050219_1,5303 HBL1_DMSO_200M_050219_1,5303, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5304 25.234 800.0 104470.0 25 0 6824.1 -1 0 62 797.5602994370205 0 797.5585815310478 PEAK CID FTMS 0 0 0 -1 0 2 3 T 1 -1 6.9897 0.0 0.0 0.43875 0.0 0.0 969.8306685988472 519.2143038385374 1489.0449724373846 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.43875 - 11 + 1 2.202 63216.5 0.5099999904632568 693 4609 5302 HBL1_DMSO_200M_050219_1,5304 HBL1_DMSO_200M_050219_1,5304, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5306 25.251 800.0 57626.0 25 0 4848.6 -1 0 45 906.9026313702732 3623.581419614693 4 907.1565429568292 MULTI CID FTMS 0 0 0 5305 110406.5 1.0 0 0.0 1 3 E 1 -1 0.9691 0.0 0.0 0.026744 0.0 0.0 2720.6922117062927 770.8127535455686 3491.504965251861 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.026744 - 5 + 1 2.202 39563.4 0.3799999952316284 694 4610 5305 HBL1_DMSO_200M_050219_1,5306 HBL1_DMSO_200M_050219_1,5306, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5307 25.264 800.0 61693.0 25 0 5012.2 -1 0 45 777.1498848195805 3880.7130417649023 5 777.7495605349541 MULTI CID FTMS 0 0 0 5305 125453.6015625 1.0 0 0.0 2 3 N 1 -1 11.99 0.0 0.0 0.30896 0.0 0.0 1964.868870758136 1798.7872417784386 3763.6561125365743 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 N 0.30896 - 8 + 1 2.202 41985.8 0.5 695 4610 5305 HBL1_DMSO_200M_050219_1,5307 HBL1_DMSO_200M_050219_1,5307, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5308 25.278 800.0 88702.0 25 0 7100.9 + 11988 GPEGQRVPA 9 101 455.740526108278 909.466499283356 2 455.7406494021416 MULTI CID FTMS 0 0 0 5305 95878.3359375 0.9651158008228208 1 -0.1006679534912109 3 Unmodified _GPEGQRVPA_ REV__ENST00000595973.2_1_19:18493140-18496906:+|nuORF 7.289230182591677 0.6602208344931196 3 EA 2 -1 19.464 0.0 0.0 2.1402 0.0 0.0 182.06807506636227 524.2950433446298 706.363118410992 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 EA 2.1402 - 60 + 1 2.202 57797.7 0.4399999976158142 696 4610 5305 HBL1_DMSO_200M_050219_1,5308 HBL1_DMSO_200M_050219_1,5308,GPEGQRVPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5309 25.292 800.0 63501.0 25 0 3366.3 -1 0 50 805.9547803494522 4024.737519414261 5 806.3582641482353 MULTI CID FTMS 0 0 0 5305 82108.2265625 1.0 0 0.0 4 3 HCH 3 -1 9.0411 0.0 0.0 0.22464 0.0 0.0 2922.2860740294423 722.2867525690061 3644.572826598449 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HCH 0.22464 - 23 + 1 2.202 44425.0 0.4000000059604645 697 4610 5305 HBL1_DMSO_200M_050219_1,5309 HBL1_DMSO_200M_050219_1,5309, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5310 25.306 800.0 102230.0 25 0 7592.0 -1 0 53 928.413918806434 3709.626569359336 4 928.9169799685478 MULTI CID FTMS 0 0 0 5305 79594.7265625 1.0 0 0.0 5 3 A 1 -1 4.6041 0.0 0.0 0.12411 0.0 0.0 2897.2690386970294 738.2995002149752 3635.568538912005 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.12411 - 8 + 1 2.202 61808.1 0.3700000047683716 698 4610 5305 HBL1_DMSO_200M_050219_1,5310 HBL1_DMSO_200M_050219_1,5310, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5311 25.321 800.0 8013.9 25 0 1262.3 -1 0 17 913.2069579958916 0 913.2069579958916 PEAK CID FTMS 0 0 0 -1 0 6 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.202 15762.6 0.3700000047683716 699 4610 5305 HBL1_DMSO_200M_050219_1,5311 HBL1_DMSO_200M_050219_1,5311, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5312 25.335 800.0 42005.0 25 0 2420.7 -1 0 53 660.2905101747757 1977.849701124527 3 660.2910034060478 MULTI CID FTMS 0 0 0 5305 72138.8671875 1.0 0 0.0 7 3 H 1 -1 21.99 0.0 0.0 1.1118 0.0 0.0 1822.780073294252 0.0 1822.780073294252 0.0 4.554687406276017 0.0 0.0 0 0.5 0.0 0.0 0.0 H 1.1118 - 23 + 1 2.202 33831.7 0.4000000059604645 700 4610 5305 HBL1_DMSO_200M_050219_1,5312 HBL1_DMSO_200M_050219_1,5312, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5314 25.34 74.0 476240.0 25 0 57305.0 + 34856 SQGFSHSQM 9 68 512.7109958984765 1023.4074388637532 2 512.7113525271416 MULTI CID FTMS 0 0 0 5313 759938.375 0.1048607629363311 15 -0.267557144165039 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 47.594388314883695 0.0456443387682827 3 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 63.222 0.0 0.0 6.1776 6.1776 85.342 0.0 0.0 0.0 23.697114610913488 47.60213141451892 23.697114610913488 6.478174818886373 0 1.242992819099939 1.0 1.079689690656103 0.6861818737241735 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G[MN]SW{[QS]|[NT]};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F} 6.1776;5.5446;5.2779;4.6869;4.6396;4.0539;3.8999;3.8526;3.7872;3.6764 -;-;-;-;-;-;-;-;-;- 140 1 2.202 34682.0 1.0 701 4611 5313 HBL1_DMSO_200M_050219_1,5314 HBL1_DMSO_200M_050219_1,5314,SQGFSHSQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5315 25.353 800.0 25962.0 25 0 1089.6 -1 0 33 751.335595207438 3751.6415937041897 5 751.9348632693291 MULTI CID FTMS 0 0 0 -1 0 2 3 P 1 -1 3.4949 0.0 0.0 0.093155 0.0 0.0 2912.276250541884 739.3034762018186 3651.5797267437024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.093155 - 5 + 1 2.202 26025.3 0.4300000071525574 702 4611 5313 HBL1_DMSO_200M_050219_1,5315 HBL1_DMSO_200M_050219_1,5315, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5317 25.359 164.0 256370.0 25 0 11263.0 -1 0 69 378.4027192006215 1886.9772136701072 5 378.4022094607353 MULTI CID FTMS 0 0 0 5316 329060.6875 0.7993403318381361 -2 0.119119644165039 1 3 [{I|L}V]QMRA[HA]KK 10 -1 51.427 0.0 0.0 2.7253 0.0 0.0 0.0 721.2534425322585 721.2534425322585 27.957574905606748 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [{I|L}V]QMRA[HA]KK 2.7253 - 89 + 1 2.202 46988.7 1.0 703 4612 5316 HBL1_DMSO_200M_050219_1,5317 HBL1_DMSO_200M_050219_1,5317, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5318 25.362 173.0 342090.0 25 0 25407.0 -1 0 81 472.7518170699994 1886.9781624135976 4 473.0024597048759 MULTI CID FTMS 0 0 0 5316 282536.1875 0.6146396432990527 -2 0.119119644165039 2 3 [{I|L}V]KMRAAHKK[HS]EESH 16 -1 + 106.28 0.0 0.0 5.6325 5.6325 89.742 0.0 0.0 0.0 95.82686309236614 15.204262829037845 15.204262829037845 23.521825181113627 0 0.3252574989159953 2.0 1.524227503252014 0.4247425010840047 [{I|L}V]KMRAAHKK[HS]EESH;{[QN]|[E{I|L}]|[KN]}EE[HS]KKHAARMK{[HG]|PP} 5.6325;4.386 -;- 251 + 1 2.202 58839.5 1.0 704 4612 5316 HBL1_DMSO_200M_050219_1,5318 HBL1_DMSO_200M_050219_1,5318, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5319 25.367 225.0 319060.0 25 0 48986.0 + 13729 HQVDVQISQT 10 97 385.5319139327949 1153.5739123985848 3 385.5312682986259 MULTI CID FTMS 0 0 0 5316 255594.921875 0.8000978131966524 -1 0.0184516906738281 3 Unmodified _HQVDVQISQT_ REV__ENSG00000146414|ENST00000275233|SHPRH;REV__nc|ENSG00000146414|Q149N8-2|SHPRH;REV__nc|ENSG00000146414|Q149N8-4|SHPRH;REV__nc|ENSG00000146414|Q149N8-5|SHPRH 19.256988751693697 0.5244284437930726 3 [VS]AKCDVH 8 -1 50.153 0.0 0.0 4.3476 0.0 0.0 0.0 311.1390876481726 311.1390876481726 33.431132024018275 0.0 0.0 0.0 0 0.5941876774005248 2.0 0.2887254899964357 0.0 [VS]AKCDVH 4.3476 - 465 1 2.202 63431.1 1.0 705 4612 5316 HBL1_DMSO_200M_050219_1,5319 HBL1_DMSO_200M_050219_1,5319,HQVDVQISQT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5320 25.372 283.0 455230.0 25 0 68187.0 + 36016 SVQHVDAAEK 10 118 361.8527598741856 1082.536450222757 3 361.8520690798759 MULTI CID FTMS 0 0 0 5316 210419.890625 0.00389567889016 131 -2.240751266479492 4 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 37.07464296494664 0.1884581770199685 3 HVDAAEK 7 3 40.424 0.0 0.0 3.7342 0.0 0.0 314.1601826913075 0.0 314.1601826913075 0.0 14.56124531683658 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.5994850021680094 + HVDAAEK 3.7342 + + 664 + 1 2.202 107982.8 1.0 706 4612 5316 HBL1_DMSO_200M_050219_1,5320 HBL1_DMSO_200M_050219_1,5320,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5321 25.382 582.0 131160.0 25 0 12634.0 + 6238 DTNADKQLS 9 116 496.2382529460117 990.4619529588234 2 496.2385436892509 MULTI CID FTMS 0 0 0 5316 172572.171875 0.0856904941578558 17 -0.2729759216308594 5 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 91.08480475639789 0.0145488605211996 3 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S 9 0 + 69.106 0.0 0.0 6.9772 6.9772 91.185 0.0 0.0 0.0 3.1234684152074976 31.85376844100236 3.1234684152074976 9.208187539523756 0 2.168826521534556 0.0 1.610924374808178 0.6237125054200234 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S;{[QS]|[NT]}DADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S;{[QG]|[NA]}DTDKQ{I|L}S;[AG]SDADKQ{I|L}S;{[QS]|[NT]}DADK[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S;{[QG]|[NA]}DTDK[AG]{I|L}S;[AG]SDADK[AG]{I|L}S 6.9772;6.0475;5.9892;5.7706;5.5218;5.2862;5.0595;4.8454;4.5921;4.3609 +;-;-;-;-;-;-;-;-;- + 771 1 2.202 61417.1 1.0 707 4612 5316 HBL1_DMSO_200M_050219_1,5321 HBL1_DMSO_200M_050219_1,5321,DTNADKQLS True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5322 25.396 800.0 166930.0 25 0 15384.0 + 33411 SHELSQDDPH 10 125 582.7494843266701 1163.48441572014 2 582.7498657107353 MULTI CID FTMS 0 0 0 5316 126689.5703125 0.4656081795477082 -6 0.1752052307128906 6 Unmodified _SHELSQDDPH_ REV__ENST00000382751.3_1_21:33687168-33687225:-|nuORF 39.94969957227396 0.1580982266129622 3 [HT]DQ{M(Oxidation (M))|F}HTAAH 10 -1 + 66.525 0.0 0.0 5.7177 5.7177 75.047 0.0 0.0 0.0 0.2283351569398206 13.334909110043329 0.2283351569398206 0.2283351569398206 0 1.274227503252014 0.8538719643217619 1.2658715643802767 0.2742275032520141 [HT]DQ{M(Oxidation (M))|F}HTAAH;{[YC]|[HE]}SQ{M(Oxidation (M))|F}HTAAH;{[YC]|[HE]}QS{M(Oxidation (M))|F}HTAAH;[HT]S{[CA]|SS}EHTAAH;[HT]DQ{M(Oxidation (M))|F}H{[QD]|[EN]|[WG]|[KD]|[RS]}H;[HT]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}EHTAAH;{[YC]|[HE]}SQ{M(Oxidation (M))|F}H{[QD]|[EN]|[WG]|[KD]|[RS]}H;[HT]D[AG]{M(Oxidation (M))|F}HTAAH;{[YC]|[HE]}S[AG]{M(Oxidation (M))|F}HTAAH;{[YC]|[HE]}QS{M(Oxidation (M))|F}H{[QD]|[EN]|[WG]|[KD]|[RS]}H 5.7177;5.6981;5.243;4.9311;4.8559;4.8407;4.8363;4.6944;4.6747;4.3812 -;-;-;-;-;-;-;-;-;- 1642 1 2.202 100959.5 0.5099999904632568 708 4612 5316 HBL1_DMSO_200M_050219_1,5322 HBL1_DMSO_200M_050219_1,5322,SHELSQDDPH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5324 25.413 800.0 123040.0 25 0 26205.0 -1 VGWRILMY 8 88 527.2810547493552 1052.5475565655104 2 527.2813598513603 MULTI CID FTMS 0 0 0 5323 120185.171875 0.8428671098708204 2 -0.0945148468017578 1 Oxidation (M) _VGWRILM(Oxidation (M))Y_ ENST00000552899.5_1_12:51470402-51476812:-|nuORF 14.581692164780916 0.6954967302934248 3 VDQH{I|L}[KQ]W 8 -1 + 41.38 0.0 0.0 3.9314 3.9314 75.972 0.0 0.0 0.0 28.90600959017256 1.7710814827263732 1.7710814827263732 4.3933269383026285 0 0.5 0.0 0.0 0.3807196863200844 VDQH{I|L}[KQ]W;VDQH{I|L}[WQ]K;DVQH{I|L}[KQ]W;VD[AG]H{I|L}[KQ]W;DVQH{I|L}[WQ]K;VD[AG]H{I|L}[WQ]K;DV[AG]H{I|L}[KQ]W;DV[AG]H{I|L}[WQ]K 3.9314;3.514;3.2837;3.0515;2.8663;2.6341;2.4038;1.9864 -;-;-;-;-;-;-;- 78 + 1 2.212 79945.8 0.4900000095367431 709 4613 5323 HBL1_DMSO_200M_050219_1,5324 HBL1_DMSO_200M_050219_1,5324,VGWRILMY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5325 25.422 465.0 172460.0 25 0 9786.7 + -1 MIALMIPFM 9 118 366.8509617444088 1097.5310558334263 3 366.8499023318291 MULTI CID FTMS 0 0 0 5323 115606.2265625 0.8413158747859555 -1 0.0423793792724609 2 2 Oxidation (M) _M(Oxidation (M))IALMIPFM(Oxidation (M))_ REV__ENSG00000170482|ENST00000348729|SLC23A1;REV__nc|ENSG00000170482|Q9UHI7-2|SLC23A1 5.731851221503515 0.7145881442174411 3 {NN|[MP]|[D{I|L}]|[EV]}C 3 -1 16.549 0.0 0.0 1.5078 0.0 0.0 0.0 763.4031926344607 763.4031926344607 5.952865993748365 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}C 1.5078 - 60 1 2.212 70043.9 1.0 710 4613 5323 HBL1_DMSO_200M_050219_1,5325 HBL1_DMSO_200M_050219_1,5325,MIALMIPFM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5326 25.435 800.0 79084.0 25 0 22100.0 -1 0 37 1129.4468403426572 3385.318691628172 3 1129.784472644329 MULTI CID FTMS 0 0 0 5323 104153.265625 0.3027440863520272 -8 0.2476215362548828 3 3 E 1 -1 6.9897 0.0 0.0 0.20647 0.0 0.0 2729.091158880135 524.1634522257868 3253.254611105922 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20647 - 14 + 1 2.212 61870.3 0.3600000143051147 711 4613 5323 HBL1_DMSO_200M_050219_1,5326 HBL1_DMSO_200M_050219_1,5326, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5327 25.444 477.0 273400.0 25 0 37655.0 36101 SVRSPTPYKK 10 115 388.2254088977273 1161.654397293382 3 388.2265197634697 MULTI CID FTMS 0 0 0 5323 96590.2265625 0.0951034563967515 -16 0.382730484008789 4 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 20.41453444215458 0.5050059513928961 3 P{I|L}T{M(Oxidation (M))|F}KK 6 7 42.855 0.0 0.0 3.6891 0.0 0.0 429.234653669384 0.0 429.234653669384 0.0 32.67406588039382 0.0 0.0 0 0.805462187404089 0.0 1.0356668758921828 0.2742275032520141 P{I|L}T{M(Oxidation (M))|F}KK 3.6891 - 188 + 1 2.212 112366.1 1.0 712 4613 5323 HBL1_DMSO_200M_050219_1,5327 HBL1_DMSO_200M_050219_1,5327,SVRSPTPYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5329 25.448 62.0 685830.0 25 0 48464.0 + 4296 DARHNVSRV 9 73 351.85648255197094 1052.5476182561129 3 351.8562499880791 MULTI CID FTMS 0 0 0 5328 698552.25 0.4217969379289357 3 -0.0817451477050781 1 Unmodified _DARHNVSRV_ ENSG00000198876|ENST00000361264|DCAF12 27.088373467376528 0.1865245257266215 3 {[DA]|[EG]}RHN 5 4 31.497 0.0 0.0 2.9925 0.0 0.0 0.0 456.2609720981629 456.2609720981629 24.02304814074487 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.2742275032520141 + {[DA]|[EG]}RHN 2.9925 + + 98 1 2.212 40589.1 1.0 713 4614 5328 HBL1_DMSO_200M_050219_1,5329 HBL1_DMSO_200M_050219_1,5329,DARHNVSRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5330 25.463 800.0 107490.0 25 0 7912.3 + -1 MWCRRRCKTTN 11 112 528.9137106126633 1583.7193024381895 3 528.9138061404228 MULTI CID FTMS 0 0 0 5328 154542.796875 0.6789366079841098 -5 0.2341194152832031 2 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))WC(Carbamidomethyl (C))RRRC(Carbamidomethyl (C))KTTN_ REV__ENST00000608178.5_1_4:141282077-141290484:-|nuORF 2.434785330301024 0.8636604596255422 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}PASHHQGSHY 14 -1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}PASH + + 40.469 -6.7136 -0.78392 2.5553 2.5553 49.447 0.0 0.0 0.0 0.0 24.80713133096572 0.0 0.0 0 0.0 0.0 0.5994850021680094 0.5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}PASHHQGSHY 2.5553 - 2034 + 1 2.212 69891.6 0.5799999833106995 714 4614 5328 HBL1_DMSO_200M_050219_1,5330 HBL1_DMSO_200M_050219_1,5330,MWCRRRCKTTN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5331 25.476 800.0 129030.0 25 0 15726.0 + 34580 SPHDPAEK 8 114 440.7114512597633 879.4083495863266 2 440.7113830447197 MULTI CID FTMS 0 0 0 5328 100846.5625 0.5120203621978944 -5 0.2341194152832031 3 Unmodified _SPHDPAEK_ REV__ENSG00000115221|ENST00000283249|ITGB6;REV__nc|ENSG00000115221|P18564-2|ITGB6 20.453626601364224 0.6087503291685402 3 VDAAEK 6 -1 58.894 0.0 0.0 6.697 0.0 0.0 248.0897442101937 0.0 248.0897442101937 0.0 47.78450353020801 0.0 0.0 0 2.4247425010840047 0.0 0.3807196863200844 0.3494850021680094 VDAAEK 6.697 - 236 + 1 2.212 85400.0 0.449999988079071 715 4614 5328 HBL1_DMSO_200M_050219_1,5331 HBL1_DMSO_200M_050219_1,5331,SPHDPAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5332 25.49 800.0 69477.0 25 0 3691.1 -1 MSSCCRSPC 9 118 552.1929056013075 1102.371258269415 2 552.1932861208916 MULTI CID FTMS 0 0 0 5328 91608.8125 0.7291961262943606 -6 0.2378406524658203 4 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))SSC(Carbamidomethyl (C))C(Carbamidomethyl (C))RSPC_ ENST00000553429.1_1_15:22546301-22546790:+|nuORF 12.531546534597751 0.4974689918368763 3 [AG]Q 3 -1 17.765 0.0 0.0 1.6115 0.0 0.0 0.0 843.2314626974024 843.2314626974024 0.6280395599721551 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.5 [AG]Q 1.6115 - 173 1 2.212 47464.4 0.4399999976158142 716 4614 5328 HBL1_DMSO_200M_050219_1,5332 HBL1_DMSO_200M_050219_1,5332,MSSCCRSPC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5334 25.508 800.0 62132.0 25 0 4002.4 -1 0 45 797.5599309992234 3982.763272663117 5 797.7615234255791 MULTI CID FTMS 0 0 0 5333 65008.328125 0.6231200491422976 3 -0.0390472412109375 1 3 Y 1 -1 9.732 0.0 0.0 0.24435 0.0 0.0 1903.856790598713 1912.8181863213567 3816.6749769200696 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Y 0.24435 - 8 + 1 2.22 41892.0 0.4099999964237213 717 4615 5333 HBL1_DMSO_200M_050219_1,5334 HBL1_DMSO_200M_050219_1,5334, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5335 25.522 800.0 112660.0 25 0 4733.4 -1 0 74 859.7188848585846 2576.1348251759537 3 859.7189819216728 MULTI CID FTMS 0 0 0 5333 78228.96875 0.3644288495029755 -7 0.2843303680419922 2 3 QA 2 -1 14.464 0.0 0.0 0.56146 0.0 0.0 1754.7934579526493 619.2105910433872 2374.0040489960365 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 QA 0.56146 - 147 + 1 2.22 65954.6 0.3600000143051147 718 4615 5333 HBL1_DMSO_200M_050219_1,5335 HBL1_DMSO_200M_050219_1,5335, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5342 25.557 800.0 194030.0 25 0 10624.0 + 34750 SQADVHRQV 9 190 347.1811268942739 1038.5215512830218 3 347.1809875369072 MULTI CID FTMS 0 0 0 5341 108020.90625 0.1724900912244087 -15 0.3628692626953125 1 Unmodified _SQADVHRQV_ ENSG00000162924|ENST00000394479|REL;ENSG00000173039|ENST00000406246|RELA;ENST00000531484.5_1_11:65421851-65429483:-|nuORF;nc|ENSG00000162924|Q04864|REL;nc|ENSG00000173039|Q04206-2|RELA;nc|ENSG00000173039|Q04206-3|RELA;nc|ENSG00000173039|Q04206-4|RELA 15.738622578938676 0.4106572216562794 3 {[QS]|[NT]}ADVH[RN]{I|L} 9 2 + 48.6 0.0 0.0 4.6797 4.6797 86.025 0.0 0.0 0.0 33.99549878353989 10.954839578393347 10.954839578393347 18.750612633916987 0 0.3807196863200844 0.3872161432802645 0.0 0.3807196863200844 {[QS]|[NT]}ADVH[RN]{I|L};{[QS]|[NT]}WVH{I|L}[NG]V;{[QS]|[NT]}V{[DA]|[EG]}H[RN]{I|L};{[QS]|[NT]}VWH{I|L}[NG]V;[WK]{[DA]|[EG]}H{I|L}[NG]V 4.6797;2.8742;2.8742;2.5843;0.32922 -;-;-;-;- 254 + 1 2.22 127810.3 0.6200000047683716 719 4621 5341 HBL1_DMSO_200M_050219_1,5342 HBL1_DMSO_200M_050219_1,5342,SQADVHRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5345 25.577 800.0 82719.0 25 0 5204.6 + 36026 SVQHVDAAEK 10 103 542.2752679692003 1082.5359830052005 2 542.2747680544853 MULTI CID FTMS 0 0 0 5344 112516.8984375 0.3132802661159795 -11 0.2075405120849609 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 3 [VS]QHVDAAEK 10 0 + 97.33 0.0 0.0 8.9909 8.9909 93.779 0.0 0.0 0.0 17.551499783199063 11.609374812552034 11.609374812552034 9.164539485499247 0 2.5356668758921828 2.0 0.8494850021680094 0.7614393726401688 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAA[VS];[VS]QHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]AGHA[DV]AA[VS];[VS]AGHVD{[NV]|[RG]}[VS];[VS]QHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAA[VS];[VS]AG{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T]GK 8.9909;8.1443;7.9185;7.2341;6.2378;5.8135;5.7577;5.5568;5.5492;5.3713 +;-;-;-;-;-;-;-;-;- + 848 + 1 2.22 53049.4 0.6100000143051147 720 4623 5344 HBL1_DMSO_200M_050219_1,5345 HBL1_DMSO_200M_050219_1,5345,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5346 25.591 800.0 30934.0 25 0 818.25 -1 0 67 645.0412381611824 2576.1358467783293 4 645.2928954958916 MULTI CID FTMS 0 0 0 5344 80529.90625 0.9385164927814604 -2 0.019876480102539 2 3 W 1 -1 15.485 0.0 0.0 0.60108 0.0 0.0 2372.045375442195 0.0 2372.045375442195 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.60108 - 67 + 1 2.22 26957.0 0.5199999809265137 721 4623 5344 HBL1_DMSO_200M_050219_1,5346 HBL1_DMSO_200M_050219_1,5346, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5348 25.599 284.0 120110.0 25 0 14049.0 -1 SQGFSHSQM 9 71 512.7109958984765 1023.4074388637532 2 512.7113525271416 MULTI CID FTMS 0 0 0 5347 168847.375 0.0232985530731973 28 -0.4410209655761719 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 36.506200033944 0.094635877243972 3 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 -1 + 35.224 0.0 0.0 3.4419 3.4419 76.94 0.0 0.0 0.0 7.376651735508915 7.001962355242956 7.001962355242956 6.47817481888638 0 0.7742275032520141 0.0 0.2614393726401688 0.3494850021680094 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]SW{[QS]|[NT]};{[SA]|[TG]}GG{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[SA]|[TG]}G{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[SA]|[TG]}GG[MN]SW{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}{[QS]|[NT]} 3.4419;2.8089;2.7577;2.7211;2.5856;2.5421;2.37;2.0828;2.0369;1.9526 -;-;-;-;-;-;-;-;-;- 221 1 2.22 34991.9 1.0 722 4624 5347 HBL1_DMSO_200M_050219_1,5348 HBL1_DMSO_200M_050219_1,5348,SQGFSHSQM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5353 25.626 800.0 98154.0 25 0 6760.1 -1 0 94 472.7518170699994 1886.9781624135976 4 473.0027953982353 MULTI CID FTMS 0 0 0 5352 52338.7109375 0.113859562224599 14 -0.2063846588134765 1 3 V{I|L}KMRAAHKKSHEESH 16 -1 + 122.06 0.0 0.0 6.4683 6.4683 88.23 0.0 0.0 0.0 105.4001225244437 15.204262829037845 15.204262829037845 9.013902021140495 0 0.3252574989159953 2.0 0.3054621874040891 0.4247425010840047 V{I|L}KMRAAHKKSHEESH;V{I|L}KM[VG]AAHKKSHEESH;V{I|L}KMRAAHKK[HN]{[QC]|[C(Carbamidomethyl (C))A]}SH;{[QN]|[E{I|L}]|[KN]}EEHSKKHAARMK{[HG]|PP};{[QN]|[E{I|L}]|[KN]}EEHSKKHAA[VG]MK{[HG]|PP};{[QN]|[E{I|L}]|[KN]}{[QC]|[C(Carbamidomethyl (C))A]}[HN]KKHAARMK{[HG]|PP};[HS]E{[{M(Oxidation (M))|F}H]|[RQ]}SKKHAARMK{[HG]|PP};[KT]{[QN]|[E{I|L}]|[KN]}RAAHKKSHEESH;[HS]E{[{M(Oxidation (M))|F}H]|[RQ]}SKKHAA[VG]MK{[HG]|PP};{[WT]|[RM]}[RP][R{M(Oxidation (M))|F}]HHAARMK{[HG]|PP} 6.4683;5.9906;5.5679;4.7067;4.229;3.8063;3.3525;3.1831;2.8748;2.8522 -;-;-;-;-;-;-;-;-;- 870 + 1 2.22 72467.3 0.699999988079071 723 4628 5352 HBL1_DMSO_200M_050219_1,5353 HBL1_DMSO_200M_050219_1,5353, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5355 25.632 61.0 1053900.0 25 0 152480.0 + 36028 SVQHVDAAEK 10 86 361.8527124309203 1082.5363078929608 3 361.8522827029228 MULTI CID FTMS 0 0 0 5354 891359.75 0.5520428722699112 -8 0.0853118896484375 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 34.221707139014875 0.2185845369562963 3 [VS]AGHVDAAEK 11 2 [VS]AG + + 42.771 23.505 7.4819 3.951 3.951 52.394 0.0 0.0 0.0 0.0 1.2822199435717607 0.0 0.0 0 0.3252574989159953 0.0 0.3807196863200844 0.3807196863200844 [VS]AGHVDAAEK 3.951 - 579 + 1 2.228 58809.1 1.0 724 4629 5354 HBL1_DMSO_200M_050219_1,5355 HBL1_DMSO_200M_050219_1,5355,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5356 25.643 676.0 76449.0 25 0 5784.1 + 6239 DTNADKQLS 9 104 496.2382529460117 990.4619529588234 2 496.2382385134697 MULTI CID FTMS 0 0 0 5354 84301.5625 0.0418598344705127 34 -0.7519969940185547 2 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 45.739877483867886 0.0497104363764649 3 {[ES]|[DT]|[{I|L}C]}NA{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}S 9 0 + 40.524 0.0 0.0 4.0915 4.0915 77.824 0.0 0.0 0.0 4.232712163289278 19.04411087094932 4.232712163289278 5.752574989159946 0 1.5172203223519531 0.0 0.6989700043360187 0.0 + + {[ES]|[DT]|[{I|L}C]}NA{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}S;{[ES]|[DT]|[{I|L}C]}NA{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}QS;{[ES]|[DT]|[{I|L}C]}GGA{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}S;{[ES]|[DT]|[{I|L}C]}NA{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}GGA{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}QS;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}S;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}QS 4.0915;3.5107;3.1618;3.1618;2.581;0.81843;0.23763 +;-;-;-;-;-;- + 163 1 2.228 47530.2 1.0 725 4629 5354 HBL1_DMSO_200M_050219_1,5356 HBL1_DMSO_200M_050219_1,5356,DTNADKQLS True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5359 25.663 800.0 81834.0 25 0 17680.0 + 31378 RNVSTGDVN 9 72 481.23871408644175 960.4628752396836 2 481.2392150759697 MULTI CID FTMS 0 0 0 5358 82646.234375 0.5712110591223256 -12 0.1137409210205078 1 Unmodified _RNVSTGDVN_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 41.95555342248728 0.0647214845423414 3 STGDVN 6 3 48.225 0.0 0.0 5.021 0.0 0.0 369.2125416486344 0.0 369.2125416486344 0.0 31.23503163448703 0.0 0.0 0 0.8807196863200843 0.0 0.7302046884880937 0.0 + STGDVN 5.021 + + 161 1 2.228 61310.1 0.5199999809265137 726 4631 5358 HBL1_DMSO_200M_050219_1,5359 HBL1_DMSO_200M_050219_1,5359,RNVSTGDVN True True RNVSTGDVN 25.663244 481.23921507597 895054.0625 5358.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 6.388066132863362 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 5362 25.683 800.0 70209.0 25 0 18523.0 -1 0 35 1129.4468403426572 3385.318691628172 3 1130.114916980267 MULTI CID FTMS 0 0 0 5361 163383.546875 0.4581257869791479 12 -0.1736564636230468 1 3 E 1 -1 6.9897 0.0 0.0 0.20647 0.0 0.0 2729.090494707295 524.1612032525999 3253.251697959895 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20647 - 5 + 1 2.228 59326.5 0.5799999833106995 727 4633 5361 HBL1_DMSO_200M_050219_1,5362 HBL1_DMSO_200M_050219_1,5362, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5363 25.697 800.0 33917.0 25 0 6010.8 -1 LYRFCRFCFIC 11 59 561.9244176154427 1682.751423446528 3 561.9241821169853 MULTI CID FTMS 0 0 0 5361 88844.375 1.0 0 0.0 2 Acetyl (Protein N-term),3 Carbamidomethyl (C) _(Acetyl (Protein N-term))LYRFC(Carbamidomethyl (C))RFC(Carbamidomethyl (C))FIC(Carbamidomethyl (C))_ ENST00000258534.12_1_12:102315336-102315390:+|nuORF 0.0 0.8751479354844584 3 Q[SG]Y{[YC]|[HE]} 6 -1 9.8553 0.0 0.0 0.58567 0.0 0.0 963.4642663193782 0.0 963.4642663193782 0.0 4.370762361577295 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.5 Q[SG]Y{[YC]|[HE]} 0.58567 - 212 + 1 2.228 30637.0 0.5400000214576721 728 4633 5361 HBL1_DMSO_200M_050219_1,5363 HBL1_DMSO_200M_050219_1,5363,LYRFCRFCFIC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5365 25.702 83.0 695980.0 25 0 72485.0 36102 SVRSPTPYKK 10 85 388.2254088977273 1161.654397293382 3 388.2252075076103 MULTI CID FTMS 0 0 0 5364 780982.5 0.7689611856052114 5 -0.0780181884765625 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 15.248480904072842 0.5916873121453583 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 36.675 12.703 2.9595 3.1572 3.1572 50.502 0.0 0.0 0.0 0.0 25.70615965204567 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.2742275032520141 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 3.1572 - 166 + 1 2.228 57718.4 1.0 729 4634 5364 HBL1_DMSO_200M_050219_1,5365 HBL1_DMSO_200M_050219_1,5365,SVRSPTPYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5368 25.722 800.0 36725.0 25 0 1179.1 -1 0 52 805.9546861795405 4024.737048564704 5 806.1576415896416 MULTI CID FTMS 0 0 0 5367 78914.953125 0.5075443421729767 -5 0.0585498809814453 1 3 HH 2 -1 8.5835 0.0 0.0 0.21327 0.0 0.0 3162.3653577461464 585.2163790338499 3747.581736779997 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HH 0.21327 - 18 + 1 2.228 26969.7 0.4699999988079071 730 4636 5367 HBL1_DMSO_200M_050219_1,5368 HBL1_DMSO_200M_050219_1,5368, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5370 25.736 673.0 90312.0 25 0 9083.3 + 34581 SPHDPAEK 8 84 440.7114512597633 879.4083495863266 2 440.7120849490166 MULTI CID FTMS 0 0 0 5369 92515.9453125 0.4697239712854549 18 -0.378915786743164 1 Unmodified _SPHDPAEK_ REV__ENSG00000115221|ENST00000283249|ITGB6;REV__nc|ENSG00000115221|P18564-2|ITGB6 20.453626601364224 0.6087503291685402 3 HVDAAEK 7 -1 61.209 0.0 0.0 6.9602 0.0 0.0 111.03304859812836 0.0 111.03304859812836 0.0 50.83022587733336 0.0 0.0 0 2.3494850021680094 0.0 0.3807196863200844 0.3252574989159953 HVDAAEK 6.9602 - 128 + 1 2.228 53592.8 1.0 731 4637 5369 HBL1_DMSO_200M_050219_1,5370 HBL1_DMSO_200M_050219_1,5370,SPHDPAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5371 25.745 527.0 150310.0 25 0 54648.0 43362 WPLWVVGMEW 10 61 434.88189555394223 0 434.8815185427666 PEAK CID FTMS 0 0 0 5369 174215.46875 0.6532382184950163 -71 1.2656745910644531 2 Unmodified _WPLWVVGMEW_ ENST00000356584.7_1_19:57985735-57987048:-|nuORF 1.844237919475145 0.3961065659209837 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.228 70203.7 1.0 732 4637 5369 HBL1_DMSO_200M_050219_1,5371 HBL1_DMSO_200M_050219_1,5371,WPLWVVGMEW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5372 25.759 800.0 79748.0 25 0 8580.1 -1 0 80 593.155821174084 592.148544707484 1 595.1584960818291 MULTI CID FTMS 0 0 0 5369 86507.171875 0.5159539183991844 6 -0.0987167358398437 3 3 W 1 -1 13.495 0.0 0.0 2.279 0.0 0.0 388.0585311350215 0.0 388.0585311350215 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.279 - 7 + 1 2.228 52814.6 0.4300000071525574 733 4637 5369 HBL1_DMSO_200M_050219_1,5372 HBL1_DMSO_200M_050219_1,5372, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5374 25.775 800.0 45046.0 25 0 2819.9 -1 CCMHYCCKSCW 11 40 797.7602803833413 0 797.7614013552666 PEAK CID FTMS 0 0 0 5373 62117.5703125 0.8091233668931065 1 -0.0162105560302734 1 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))MHYC(Carbamidomethyl (C))C(Carbamidomethyl (C))KSCW_ ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF;nc|ENSG00000112659|Q8IWT3-3|CUL9 0.2690200627634905 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.228 34664.9 0.3799999952316284 734 4638 5373 HBL1_DMSO_200M_050219_1,5374 HBL1_DMSO_200M_050219_1,5374,CCMHYCCKSCW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5377 25.795 800.0 47084.0 25 0 2368.9 -1 0 53 734.9322042477174 3669.624638905587 5 735.5356933474541 MULTI CID FTMS 0 0 0 5376 38579.1875 0.4920616636527308 1 -0.0162277221679687 1 3 N 1 -1 3.9794 0.0 0.0 0.10844 0.0 0.0 2820.2511170323432 732.3081148736936 3552.559231906037 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.10844 - 7 + 1 2.228 34440.4 0.5199999809265137 735 4640 5376 HBL1_DMSO_200M_050219_1,5377 HBL1_DMSO_200M_050219_1,5377, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5379 25.803 220.0 317660.0 25 0 14756.0 + 34751 SQADVHRQV 9 108 347.1811268942739 1038.5215512830218 3 347.1806518435478 MULTI CID FTMS 0 0 0 5378 254602.625 0.4065549117925857 5 -0.0491199493408203 1 Unmodified _SQADVHRQV_ ENSG00000162924|ENST00000394479|REL;ENSG00000173039|ENST00000406246|RELA;ENST00000531484.5_1_11:65421851-65429483:-|nuORF;nc|ENSG00000162924|Q04864|REL;nc|ENSG00000173039|Q04206-2|RELA;nc|ENSG00000173039|Q04206-3|RELA;nc|ENSG00000173039|Q04206-4|RELA 15.738622578938676 0.4106572216562794 3 {[QS]|[NT]}ADVH[RN]{I|L} 9 2 + 44.759 0.0 0.0 4.3098 4.3098 86.164 0.0 0.0 0.0 32.76893393636108 4.9595372608497 4.9595372608497 44.75863397972127 0 0.5 0.638272163982407 0.0 0.3252574989159953 {[QS]|[NT]}ADVH[RN]{I|L} 4.3098 - 120 + 1 2.228 62349.9 1.0 736 4641 5378 HBL1_DMSO_200M_050219_1,5379 HBL1_DMSO_200M_050219_1,5379,SQADVHRQV False True SQADVHRQV 25.802768 347.180651843548 5564269.5 5378.0 nc|ENSG00000173039|Q04206-4|RELA;;nc|ENSG00000173039|Q04206-2|RELA;;nc|ENSG00000173039|Q04206-3|RELA;;ENSG00000162924|ENST00000394479|REL;;ENSG00000173039|ENST00000406246|RELA;;ENST00000531484.5_1_11:65421851-65429483:-|nuORF;;nc|ENSG00000162924|Q04864|REL 5.7715638478597 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5380 25.817 800.0 34526.0 25 0 2464.6 -1 0 67 571.9277072442583 1712.7612923329748 3 571.9277221560478 MULTI CID FTMS 0 0 0 5378 76159.6640625 0.5253052351098969 -7 0.0981979370117187 2 3 QGSH[YE] 6 -1 17.44 0.0 0.0 1.0182 0.0 0.0 993.473304654502 0.0 993.473304654502 0.0 7.975694635544745 0.0 0.0 0 0.0 0.0 0.0 0.5 QGSH[YE] 1.0182 - 162 + 1 2.228 32733.7 0.4000000059604645 737 4641 5378 HBL1_DMSO_200M_050219_1,5380 HBL1_DMSO_200M_050219_1,5380, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5383 25.837 800.0 142860.0 25 0 10139.0 + 36027 SVQHVDAAEK 10 120 542.2752679692003 1082.5359830052005 2 542.2750732302666 MULTI CID FTMS 0 0 0 5382 166895.21875 0.4646855651867035 9 -0.211517333984375 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 81.92315094803507 0.0154917182261583 3 [VS]QHVDAAEK 10 0 + 116.46 0.0 0.0 10.758 10.758 94.702 0.0 0.0 0.0 69.13425655227236 16.091896990114236 16.091896990114236 9.164539485499262 0 3.221848749616356 2.0 0.805462187404089 0.805462187404089 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]QHVADAEK;[VS]AGHVDAAEK;[VS][AG]HVADAEK;[VS]AGHVDAAA[VS];WQH{[RE]|[WV]}AEK;[VS]QHVDAAA[VS];[VS]Q{M(Oxidation (M))|F}AK{M(Oxidation (M))|F}EK;[VS]AGHVD[DV]GK 10.758;9.9118;9.8033;9.1765;8.9567;7.8701;7.2838;7.2369;7.1933;7.1015 +;-;-;-;-;-;-;-;-;- + 3133 + 1 2.228 90823.9 0.8199999928474426 738 4643 5382 HBL1_DMSO_200M_050219_1,5383 HBL1_DMSO_200M_050219_1,5383,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5387 25.852 287.0 143420.0 25 0 17700.0 + 34857 SQGFSHSQM 9 76 512.7109958984765 1023.4074388637532 2 512.7111694216728 MULTI CID FTMS 0 0 0 5386 195493.75 0.0269753764892901 50 -1.0935535430908203 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 61.60191391372663 0.0251951588191061 3 {[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F} 9 0 + 58.227 0.0 0.0 5.6896 5.6896 80.201 0.0 0.0 0.0 3.2232141159514214 3.2232141159514214 3.2232141159514214 3.2232141159514214 0 1.3182503180159344 1.0457574905606752 0.0 0.3494850021680094 + + {[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHS[AG]{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HS[AG]{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};[HS][YQ]QTN{M(Oxidation (M))|F} 5.6896;5.3746;4.6721;4.4749;4.4483;4.3696;3.8099;3.767;3.4646;1.4989 +;-;-;-;-;-;-;-;-;- + 138 + 1 2.228 37962.2 1.0 739 4646 5386 HBL1_DMSO_200M_050219_1,5387 HBL1_DMSO_200M_050219_1,5387,SQGFSHSQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5388 25.866 800.0 79103.0 25 0 3175.1 -1 0 71 817.0327131652882 2448.0763100960644 3 817.3651000857353 MULTI CID FTMS 0 0 0 5386 130875.234375 0.8938008364321788 -1 0.0037250518798828 2 3 AGG[HS]YC 7 -1 21.471 0.0 0.0 0.87704 0.0 0.0 1754.7927938318423 0.0 1754.7927938318423 0.0 5.985994592184554 0.0 0.0 0 0.1989700043360187 0.0 0.3494850021680094 0.0 AGG[HS]YC 0.87704 - 144 + 1 2.228 51606.8 0.5899999737739563 740 4646 5386 HBL1_DMSO_200M_050219_1,5388 HBL1_DMSO_200M_050219_1,5388, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5389 25.88 800.0 63604.0 25 0 3139.2 -1 0 51 750.1313865495918 3745.6205504149584 5 750.5333129763603 MULTI CID FTMS 0 0 0 5386 64695.48046875 0.7953066465316279 2 -0.0392894744873046 3 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.18661 0.0 0.0 2642.1920358659336 953.3857515924436 3595.5777874583773 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.18661 - 21 + 1 2.228 46185.4 0.4699999988079071 741 4646 5386 HBL1_DMSO_200M_050219_1,5389 HBL1_DMSO_200M_050219_1,5389, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5392 25.9 800.0 63695.0 25 0 3286.8 -1 0 55 661.50287836405 3302.47800948725 5 661.7030517458916 MULTI CID FTMS 0 0 0 5391 53535.6328125 0.5800411091218387 1 -0.0577621459960937 1 3 AT 2 -1 22.206 0.0 0.0 0.67241 0.0 0.0 2293.0674323947032 834.3011568658811 3127.3685892605845 0.0 0.0 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 AT 0.67241 - 8 + 1 2.241 48984.8 0.5600000023841858 742 4648 5391 HBL1_DMSO_200M_050219_1,5392 HBL1_DMSO_200M_050219_1,5392, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5393 25.914 800.0 115820.0 25 0 19724.0 + 13963 HYQTGSNHM 9 124 537.7245436947497 1073.4345344562994 2 537.7250854372978 MULTI CID FTMS 0 0 0 5391 97921.03125 0.5945154410755368 -6 0.0671901702880859 2 Unmodified _HYQTGSNHM_ ENSG00000121073|ENST00000240333|SLC35B1;ENST00000435059.6_1_17:47781399-47785273:-|nuORF;ENST00000504260.5_1_17:47779261-47782716:-|nuORF;ENST00000513508.1_1_17:47781399-47782716:-|nuORF;nc|ENSG00000121073|P78383-2|SLC35B1 70.33199760932243 0.0209706178985989 3 HYQT[SG]NMH 9 2 + 49.755 0.0 0.0 4.6352 4.6352 83.155 0.0 0.0 0.0 21.690928976396226 1.8960599573132697 1.8960599573132697 9.208187539523747 0 1.5941876774005248 1.5228787452803376 0.3494850021680094 0.75 HYQT[SG]NMH;HY[AG]T[SG]NMH;HYQT[SG]GGMH;HYQT[{M(Oxidation (M))|F}E]{[{M(Oxidation (M))|F}C]|[YS]};HYQTDD[PA]Q;HY[AG]T[{M(Oxidation (M))|F}E]{[{M(Oxidation (M))|F}C]|[YS]};[TP]D{[QC]|[C(Carbamidomethyl (C))A]}TAAHM;[YQ]{M(Oxidation (M))|F}V{[{M(Oxidation (M))|F}C]|[YS]}HM;{[CT]|[{M(Oxidation (M))|F}G]}S{M(Oxidation (M))|F}V{[{M(Oxidation (M))|F}C]|[YS]}HM;[HM][HN][PG]NHM 4.6352;3.7773;3.7773;3.6278;3.0119;2.0662;1.1302;0.98661;0.80283;0.69986 -;-;-;-;-;-;-;-;-;- 432 + 1 2.241 72387.6 0.5600000023841858 743 4648 5391 HBL1_DMSO_200M_050219_1,5393 HBL1_DMSO_200M_050219_1,5393,HYQTGSNHM True True HYQTGSNHM 25.913858 537.725085437298 996279.5 5391.0 ENST00000513508.1_1_17:47781399-47782716:-|nuORF;;ENSG00000121073|ENST00000240333|SLC35B1;;nc|ENSG00000121073|P78383-2|SLC35B1;;ENST00000504260.5_1_17:47779261-47782716:-|nuORF;;ENST00000435059.6_1_17:47781399-47785273:-|nuORF 6.235004266103108 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5394 25.928 800.0 27966.0 25 0 1215.2 28762 PWQVSLWLRRR 11 39 748.9312627108445 0 749.1301147341728 PEAK CID FTMS 0 0 0 5391 62394.765625 1.0 0 0.0 3 Unmodified _PWQVSLWLRRR_ ENSG00000178297|ENST00000696167|TMPRSS9;nc|ENSG00000178297|Q7Z410|TMPRSS9 0.3506318815782774 0.47618401536486 3 T 1 11 5.4846 0.0 0.0 0.36665 0.0 0.0 515.4186644824327 876.3578585260374 1391.77652300847 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.36665 - 2 + 1 2.241 24576.7 0.4799999892711639 744 4648 5391 HBL1_DMSO_200M_050219_1,5394 HBL1_DMSO_200M_050219_1,5394,PWQVSLWLRRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5395 25.942 800.0 41435.0 25 0 2927.3 -1 0 39 808.9597537759628 4039.7623865468136 5 809.3582031130791 MULTI CID FTMS 0 0 0 5391 62975.87109375 1.0 0 0.0 4 3 G 1 -1 4.6041 0.0 0.0 0.11397 0.0 0.0 3420.495371021226 559.2180880182249 3979.713459039451 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.11397 - 27 + 1 2.241 30418.8 0.4600000083446502 745 4648 5391 HBL1_DMSO_200M_050219_1,5395 HBL1_DMSO_200M_050219_1,5395, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5398 25.962 800.0 151840.0 25 0 6128.1 -1 0 124 730.5726722004998 2918.261582935599 4 730.8243896365166 MULTI CID FTMS 0 0 0 5397 115862.9140625 0.4542439886488415 -1 0.0040035247802734 1 3 SGQA{I|L}{[NV]|[RG]}A 8 -1 45.756 0.0 0.0 1.5679 0.0 0.0 399.1366078075815 1775.7725982806462 2174.909206088228 0.0 0.0 0.0 0.0 0 1.048455006504028 0.0 0.0 1.4916440611282626 SGQA{I|L}{[NV]|[RG]}A 1.5679 - 4137 + 1 2.241 92423.8 0.7599999904632568 746 4650 5397 HBL1_DMSO_200M_050219_1,5398 HBL1_DMSO_200M_050219_1,5398, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5399 25.976 800.0 166930.0 25 0 22404.0 -1 0 48 1135.4674087589756 3403.380396877127 3 1135.802661120892 MULTI CID FTMS 0 0 0 5397 157224.25 0.8563415953250934 -1 0.0040035247802734 2 3 Y 1 -1 5.4846 0.0 0.0 0.16115 0.0 0.0 1311.4975366249766 1925.8341335395944 3237.331670164572 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.16115 - 9 + 1 2.241 94924.0 0.5600000023841858 747 4650 5397 HBL1_DMSO_200M_050219_1,5399 HBL1_DMSO_200M_050219_1,5399, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5400 25.99 800.0 182350.0 25 0 17477.0 -1 0 60 851.8517304749647 3403.3778160334587 4 852.1039916872978 MULTI CID FTMS 0 0 0 5397 140399.21875 0.7049815252795137 -1 0.0040035247802734 3 3 E 1 -1 5.4846 0.0 0.0 0.16115 0.0 0.0 2747.152914765684 524.1605318658811 3271.313446631565 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16115 - 19 + 1 2.241 116926.3 0.6299999952316284 748 4650 5397 HBL1_DMSO_200M_050219_1,5400 HBL1_DMSO_200M_050219_1,5400, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5401 26.003 800.0 82770.0 25 0 6159.6 + 6240 DTNADKQLS 9 117 496.2382663513347 990.4619797694694 2 496.2386352419853 MULTI CID FTMS 0 0 0 5397 113810.0703125 0.7699756063475929 10 -0.3075389862060547 4 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 73.1962812333195 0.0198633909068982 3 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S 9 0 + 60.529 0.0 0.0 6.1112 6.1112 88.049 0.0 0.0 0.0 5.253312076568903 45.925318703383056 5.253312076568903 9.208187539523747 0 2.091129063296272 0.0 1.305462187404089 0.3252574989159953 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S;{[QS]|[NT]}DADKQ{I|L}S;[AG]SDADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S;{[QS]|[NT]}DADK[AG]{I|L}S;[AG]SDADK[AG]{I|L}S;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}DKQ{I|L}S;[AG]G{[ES]|[DT]|[{I|L}C]}DKQ{I|L}S 6.1112;5.1815;5.1815;4.9412;4.6498;4.2563;4.0115;3.7245;3.2537;2.7388 +;-;-;-;-;-;-;-;-;- + 487 1 2.241 55967.8 0.5799999833106995 749 4650 5397 HBL1_DMSO_200M_050219_1,5401 HBL1_DMSO_200M_050219_1,5401,DTNADKQLS True True DTNADKQLS 26.003317 496.238635241985 365888096.0 5397.0 ENSG00000163220|ENST00000368738|S100A9 7.51857058207194 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5403 26.021 800.0 56817.0 25 0 3081.5 -1 0 64 781.6742897913971 2342.001039974391 3 781.6731445193291 MULTI CID FTMS 0 0 0 5402 48414.36328125 0.5138924662024719 1 -0.0286979675292968 1 3 W 1 -1 13.495 0.0 0.0 0.57621 0.0 0.0 2137.910370273999 0.0 2137.910370273999 0.0 0.5360498482393439 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.57621 - 188 + 1 2.251 41887.7 0.4300000071525574 750 4651 5402 HBL1_DMSO_200M_050219_1,5403 HBL1_DMSO_200M_050219_1,5403, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5404 26.025 242.0 409780.0 25 0 71189.0 + 36029 SVQHVDAAEK 10 111 361.8527124309203 1082.5363078929608 3 361.8520690798759 MULTI CID FTMS 0 0 0 5402 289062.03125 0.1790238273552567 14 -0.4064445495605469 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 3 HVDAAEK 7 3 29.869 0.0 0.0 2.7592 0.0 0.0 314.1602923769992 0.0 314.1602923769992 0.0 5.924530016037704 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.2887254899964357 + HVDAAEK 2.7592 + + 618 + 1 2.251 86891.6 1.0 751 4651 5402 HBL1_DMSO_200M_050219_1,5404 HBL1_DMSO_200M_050219_1,5404,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5405 26.032 368.0 224370.0 25 0 24819.0 + 1354 YAKPPSHHV 9 107 345.8502779458612 0 345.8502990603447 PEAK CID FTMS 0 0 0 5402 137802.84375 1.0 0 0.0 3 Unmodified _AKYVDHRF_ ENSG00000198933|ENST00000578982|TBKBP1 8.745405648335112 0.5556641754772006 3 T 1 8 7.8567 0.0 0.0 1.1392 0.0 0.0 260.45286194465365 325.1633166589079 585.6161786035616 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 T 1.1392 - 54 + 1 2.251 73715.4 1.0 752 4651 5402 HBL1_DMSO_200M_050219_1,5405 HBL1_DMSO_200M_050219_1,5405,AKYVDHRF False False YAKPPSHHV 26.03203 345.850299060345 645049.0625 5402.0 ENSG00000198933|ENST00000578982|TBKBP1 4.231885989507039 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5407 26.048 800.0 164600.0 25 0 19482.0 -1 0 70 499.25595090044175 1992.994697735367 4 499.5072204470634 MULTI CID FTMS 0 0 0 5406 107295.40625 0.8613794779143519 1 -0.0347347259521484 1 3 W 1 -1 16.99 0.0 0.0 0.85247 0.0 0.0 1788.9046841629045 0.0 1788.9046841629045 0.0 -0.0886438348021556 -0.0886438348021556 0.0 0 0.0 0.0 0.0 0.0 W 0.85247 - 25 + 1 2.251 112726.5 0.5 753 4652 5406 HBL1_DMSO_200M_050219_1,5407 HBL1_DMSO_200M_050219_1,5407, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5408 26.053 251.0 192530.0 25 0 14364.0 -1 0 55 399.6063389658552 1992.995312496276 5 399.6057922244072 MULTI CID FTMS 0 0 0 5406 90754.375 0.8095954176432139 -1 0.0286979675292968 2 3 [H{I|L}]Q 3 -1 19.041 0.0 0.0 0.9554 0.0 0.0 0.0 1611.7711053031696 1611.7711053031696 12.44727494896694 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [H{I|L}]Q 0.9554 - 25 1 2.251 47385.7 1.0 754 4652 5406 HBL1_DMSO_200M_050219_1,5408 HBL1_DMSO_200M_050219_1,5408, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5409 26.067 800.0 30758.0 25 0 3674.5 -1 0 54 549.4993283482246 2193.968207526498 4 549.7514526247978 MULTI CID FTMS 0 0 0 5406 69198.484375 1.0 0 0.0 3 3 W 1 -1 11.594 0.0 0.0 0.52844 0.0 0.0 1989.877720931575 0.0 1989.877720931575 0.0 2.811833540200624 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.52844 - 29 + 1 2.251 32848.7 0.3899999856948852 755 4652 5406 HBL1_DMSO_200M_050219_1,5409 HBL1_DMSO_200M_050219_1,5409, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5412 26.087 800.0 99428.0 25 0 6994.8 + 33063 SEQPLTSQSQS 11 124 596.2779320311254 1190.5413111290509 2 596.2783691287041 MULTI CID FTMS 0 0 0 5411 116062.9140625 0.5318531500551578 -2 0.0385856628417968 1 Unmodified _SEQPLTSQSQS_ REV__ENSG00000153820|ENST00000392056|SPHKAP;REV__nc|ENSG00000153820|Q2M3C7-2|SPHKAP 49.52724829834842 0.1202481389936634 3 SQSPD[{I|L}P]TN 9 -1 66.225 0.0 0.0 5.5626 0.0 0.0 233.09936884565064 0.0 233.09936884565064 0.0 32.0003212313933 0.0 0.0 0 0.75 0.0 1.5356668758921828 0.8921590589602532 SQSPD[{I|L}P]TN 5.5626 - 1318 + 1 2.251 63933.8 0.6399999856948853 756 4654 5411 HBL1_DMSO_200M_050219_1,5412 HBL1_DMSO_200M_050219_1,5412,SEQPLTSQSQS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5413 26.101 800.0 120240.0 25 0 11017.0 + 3851 DAKKQIKQV 9 135 529.3218002682133 1056.6290476032266 2 529.3214599490166 MULTI CID FTMS 0 0 0 5411 96827.0859375 0.5858753366432131 -2 0.0385856628417968 2 Unmodified _DAKKQIKQV_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B 93.16586880292088 0.0136995152735431 3 {[QV]|[N{I|L}]|[RA]|[KV]}SKQ{I|L}KQV 9 2 + 79.311 0.0 0.0 7.506 7.506 87.222 0.0 0.0 0.0 4.528937514676485 9.057102057382522 4.528937514676485 4.528937514676485 0 1.579689690656103 1.2218487496163564 1.3684151806525389 0.1747425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}SKQ{I|L}KQV;{[DA]|[EG]}KKQ{I|L}KQV;DAKKQ{I|L}KVQ;{[QV]|[N{I|L}]|[RA]|[KV]}SK[AG]{I|L}KQV;{[QV]|[N{I|L}]|[RA]|[KV]}SKQ{I|L}K[AG]V;[AG]VSKQ{I|L}KQV;{[DA]|[EG]}KKQ{I|L}K[AG]V;{[DA]|[EG]}KK[AG]{I|L}KQV;VQSKQ{I|L}KVQ;[KA]KDQ{I|L}KQV 7.506;7.0774;6.6488;6.6345;6.6345;6.3677;6.2059;6.2059;6.0101;5.8873 -;+;-;-;-;-;-;-;-;- + 1077 1 2.251 79063.4 0.550000011920929 757 4654 5411 HBL1_DMSO_200M_050219_1,5413 HBL1_DMSO_200M_050219_1,5413,DAKKQIKQV True True DAKKQIKQV 26.100667 529.321459949017 751793.8125 5411.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 6.216287136077881 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5415 26.113 485.0 113880.0 25 0 11351.0 + 34858 SQGFSHSQM 9 104 512.7109958984765 1023.4074388637532 2 512.7110473513603 MULTI CID FTMS 0 0 0 5414 192607.515625 0.026577116908603 59 -1.0704612731933594 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 76.82478488871298 0.0184607444814265 3 {[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F} 9 0 + 77.367 0.0 0.0 7.5597 7.5597 91.148 0.0 0.0 0.0 8.743434768119016 8.743434768119016 8.743434768119016 8.743434768119016 0 1.424742501084005 1.2218487496163564 0.5796896906561032 0.7302046884880937 + + {[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QT{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G{M(Oxidation (M))|F}SHS[AG]{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]T{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[QS]|[NT]}{[WN]|[YH]}QT{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[QS]|[NT]}[YQ]HSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G[MN]SW{[QS]|[NT]} 7.5597;6.7054;6.0435;5.9465;5.8056;5.61;5.1469;5.1438;4.9482;4.8987 +;-;-;-;-;-;-;-;-;- + 673 + 1 2.262 48470.6 1.0 758 4655 5414 HBL1_DMSO_200M_050219_1,5415 HBL1_DMSO_200M_050219_1,5415,SQGFSHSQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5416 26.12 364.0 260040.0 25 0 29359.0 + 25878 NLHTAVNEEK 10 109 385.5317748957801 1153.5734952875405 3 385.5312377810478 MULTI CID FTMS 0 0 0 5414 142151.953125 0.3603605155885786 -4 0.0973796844482421 2 Unmodified _NLHTAVNEEK_ ENSG00000102010|ENST00000348343|BMX 13.90604991867851 0.6142120002215601 3 [VS]QHVDAAAEK 11 8 [VS]Q + + 39.838 21.171 6.7389 3.4535 3.4535 51.165 0.0 0.0 0.0 0.0 8.05497898999569 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.2742275032520141 [VS]QHVDAAAEK 3.4535 - 546 + 1 2.262 80976.4 1.0 759 4655 5414 HBL1_DMSO_200M_050219_1,5416 HBL1_DMSO_200M_050219_1,5416,NLHTAVNEEK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5417 26.133 800.0 173460.0 25 0 9934.2 + 6313 DVHLWIDEK 9 128 577.7936367565572 1153.5727205799144 2 577.7935058474541 MULTI CID FTMS 0 0 0 5414 110109.078125 0.3384723601774451 -3 0.0686817169189453 3 Unmodified _DVHLWIDEK_ REV__ENSG00000132437|ENST00000444124|DDC;REV__nc|ENSG00000132437|P20711-2|DDC;REV__nc|ENSG00000132437|P20711-3|DDC;REV__nc|ENSG00000132437|P20711-4|DDC 32.30548876998284 0.1201446275138228 3 [VS]QHVDAAAEK 11 -1 + 122.02 0.0 0.0 10.578 10.578 94.396 0.0 0.0 0.0 13.801438553739487 13.801438553739487 13.801438553739487 9.128498242811006 0 3.710409376976187 2.0 1.1549471895720984 0.7742275032520141 [VS]QHVDAAAEK;[VS][AG]HVDAAAEK;[VS]AGHVDAAAEK;[VS]Q{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}AAEK;[VS]Q{M(Oxidation (M))|F}QA{M(Oxidation (M))|F}AEK;[VS]AGHVDA[DV]GK;[VS]AGHVD[VG]GEK;[VS][AG]{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}AAEK;[VS]Q{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F}AAEK;WQH{[RE]|[WV]}AAEK 10.578;9.7865;9.3814;8.1634;7.6869;7.5376;7.427;7.3689;7.3689;7.3579 -;-;-;-;-;-;-;-;-;- 4687 + 1 2.262 106300.4 0.4799999892711639 760 4655 5414 HBL1_DMSO_200M_050219_1,5417 HBL1_DMSO_200M_050219_1,5417,DVHLWIDEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5419 26.143 381.0 189450.0 25 0 25109.0 + 33412 SHELSQDDPH 10 82 582.7495215385554 1163.4844901439108 2 582.7484619021416 MULTI CID FTMS 0 0 0 5418 171079.65625 0.3625702020228779 -2 0.0627670288085937 1 Unmodified _SHELSQDDPH_ REV__ENST00000382751.3_1_21:33687168-33687225:-|nuORF 34.40172386719151 0.2166836008404837 3 THEQSEH 7 -1 78.096 0.0 0.0 6.7123 0.0 0.0 297.1322923170072 0.0 297.1322923170072 0.0 65.79184231111013 0.0 0.0 0 2.2302046884880937 0.0 1.2302046884880935 0.3807196863200844 THEQSEH 6.7123 - 495 + 1 2.262 60093.4 1.0 761 4656 5418 HBL1_DMSO_200M_050219_1,5419 HBL1_DMSO_200M_050219_1,5419,SHELSQDDPH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5420 26.147 219.0 185660.0 25 0 23381.0 -1 0 63 592.259324404532 1773.756143813796 3 592.2588989138603 MULTI CID FTMS 0 0 0 5418 168085.953125 0.4108612100840207 -2 0.0627670288085937 2 3 H 1 -1 11.42 0.0 0.0 0.64383 0.0 0.0 1618.6863786544193 0.0 1618.6863786544193 0.0 7.440583195105628 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.64383 - 26 + 1 2.262 40809.8 1.0 762 4656 5418 HBL1_DMSO_200M_050219_1,5420 HBL1_DMSO_200M_050219_1,5420, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5421 26.161 800.0 105710.0 25 0 3188.9 -1 0 69 743.130187798095 3710.6145566574746 5 743.3317748904228 MULTI CID FTMS 0 0 0 5418 124586.609375 0.6158295016847463 -2 0.0627670288085937 3 3 H 1 -1 6.9897 0.0 0.0 0.18837 0.0 0.0 3009.314786541689 561.2192731103086 3570.534059651998 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.18837 - 97 + 1 2.262 65193.3 0.5 763 4656 5418 HBL1_DMSO_200M_050219_1,5421 HBL1_DMSO_200M_050219_1,5421, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5423 26.177 800.0 46323.0 25 0 3880.2 -1 0 43 815.1640217515305 4070.783726424652 5 815.3657104372978 MULTI CID FTMS 0 0 0 5422 84338.140625 1.0 0 0.0 1 3 Y 1 -1 0.9691 0.0 0.0 0.023806 0.0 0.0 3176.3923212506274 728.2957857721311 3904.688107022759 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.023806 - 1 + 1 2.262 37319.0 0.3799999952316284 764 4657 5422 HBL1_DMSO_200M_050219_1,5423 HBL1_DMSO_200M_050219_1,5423, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5424 26.191 800.0 142340.0 25 0 12205.0 + -1 RRCCPKEYYRR 11 116 548.6042256263863 1642.790847479359 3 548.9392578005791 MULTI CID FTMS 0 0 0 5422 108734.4765625 0.589635831794568 -1 0.0272083282470703 2 2 Carbamidomethyl (C) _RRC(Carbamidomethyl (C))C(Carbamidomethyl (C))PKEYYRR_ REV__ENSG00000266472|ENST00000614145|MRPS21 0.0948413911109767 0.8747004676205551 3 {[SA]|[TG]}E[RP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}AGGAPTAS[KA] 17 -1 + 54.26 0.0 0.0 3.3029 3.3029 70.812 0.0 0.0 0.0 2.765026227360167 39.05990484887063 2.765026227360167 1.955198108940067 0 0.6694451763165201 0.619788758288394 1.5044321917401078 0.0 {[SA]|[TG]}E[RP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}AGGAPTAS[KA];{[SA]|[TG]}E[RP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}AGQPTAS[KA];{[SA]|[TG]}E[RP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}AGKPTAS[QA];{[SA]|[TG]}E[RP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}AGGPSRS[QA];{[SA]|[TG]}E[RP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}QGAPTAS[KA];{[CP]|[EA]}S[RP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}AGGAPTAS[KA];{[SA]|[TG]}EK{[QG]|[NA]}{[{M(Oxidation (M))|F}H]|[RQ]}GGAPTAS[QA];{[SA]|[TG]}E[RP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}QKPTAS[QA];{[SA]|[TG]}E[RP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}QQPTAS[KA];{[CP]|[EA]}S[RP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}AGKPTAS[QA] 3.3029;3.1839;3.1839;3.1183;3.0767;3.0491;3.0125;2.9587;2.9587;2.9301 -;-;-;-;-;-;-;-;-;- 5830 1 2.262 92011.3 0.4699999988079071 765 4657 5422 HBL1_DMSO_200M_050219_1,5424 HBL1_DMSO_200M_050219_1,5424,RRCCPKEYYRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5425 26.204 800.0 75191.0 25 0 2876.5 -1 0 80 751.5326792311763 3752.627013822881 5 751.9326660037041 MULTI CID FTMS 0 0 0 5422 90978.1953125 0.9099356469428664 -1 0.0272083282470703 3 3 TQG[WP]HQQ 8 -1 17.841 0.0 0.0 0.47543 0.0 0.0 2772.1908912613453 0.0 2772.1908912613453 0.0 11.387437564371016 0.0 0.0 0 0.0 0.0 0.0 0.9247425010840048 TQG[WP]HQQ 0.47543 - 452 + 1 2.262 48682.0 0.4300000071525574 766 4657 5422 HBL1_DMSO_200M_050219_1,5425 HBL1_DMSO_200M_050219_1,5425, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5428 26.217 374.0 187420.0 25 0 62388.0 + 6010 DRYLYKQTTD 10 64 434.88189555394223 0 434.8823425173759 PEAK CID FTMS 0 0 0 5427 171460.5625 0.6429084236508326 -49 0.9740486145019532 1 Unmodified _DRYLYKQTTD_ REV__ENSG00000171466|ENST00000453372|ZNF562 1.4819007175156935 0.3961065659209837 3 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.45859 0.0 0.0 433.5321494069095 284.16205774478755 717.694207151697 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.45859 - 2 + 1 2.276 59269.6 1.0 767 4659 5427 HBL1_DMSO_200M_050219_1,5428 HBL1_DMSO_200M_050219_1,5428,DRYLYKQTTD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5429 26.231 800.0 102630.0 25 0 2639.4 -1 0 90 725.9202136875837 3624.564686104918 5 726.3224365115166 MULTI CID FTMS 0 0 0 5427 118810.84375 0.5955206884452966 -1 0.0038585662841796 2 3 TQQ 3 -1 26.242 0.0 0.0 0.72401 0.0 0.0 2644.1352994454014 620.2477511041624 3264.383050549564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.805462187404089 TQQ 0.72401 - 616 + 1 2.276 66672.8 0.6100000143051147 768 4659 5427 HBL1_DMSO_200M_050219_1,5429 HBL1_DMSO_200M_050219_1,5429, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5430 26.239 448.0 267170.0 25 0 23220.0 + + 35714 SVQHVDAAEK 10 112 542.7671295927397 1083.519706252279 2 542.7657348513603 MULTI CID FTMS 0 0 0 5427 121497.921875 0.1356746036038834 -3 0.0749759674072265 3 Unmodified _SVHEEVQEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 53.40400417844725 0.0329064971918313 3 SVEHVDAAEK 10 -1 + 120.67 0.0 0.0 11.137 11.137 97.982 0.0 0.0 0.0 65.33977429681784 18.279550148593486 18.279550148593486 18.802112417116064 0 3.1791746928241125 2.0 0.9247425010840048 0.3252574989159953 SVEHVDAAEK;[VS]EHVDAAEK;SV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{M(Oxidation (M))|F}AEK;[HV]ESVDAAEK;{[YC]|[HE]}VSVDAAEK;WEH{[RE]|[WV]}AEK;SV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[{M(Oxidation (M))|F}E]EK;[HV]DTVDAAEK;[VS]E{M(Oxidation (M))|F}K{M(Oxidation (M))|F}AEK;[VS]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[VS]AEK 11.137;9.4013;8.7602;7.6413;7.5543;7.3754;6.9196;6.8166;6.5159;5.7631 -;-;-;-;-;-;-;-;-;- 2523 + 1 2.276 95513.4 1.0 769 4659 5427 HBL1_DMSO_200M_050219_1,5430 HBL1_DMSO_200M_050219_1,5430,SVHEEVQEK False False SVQHVDAAEK 26.239268 542.76573485136 0.0 5427.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 1.5413028399149578 2.0 False 10.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5431 26.253 800.0 274470.0 25 0 30527.0 + 36388 SYQKARQSM 9 200 366.8507855526369 1097.5305272581109 3 366.8498107790947 MULTI CID FTMS 0 0 0 5427 102230.03125 0.1935556455152408 -2 0.0477676391601562 4 Unmodified _SYQKARQSM_ ENSG00000105656|ENST00000262809|ELL 59.36838082759317 0.0264317782606298 3 SYQKANRTM 9 3 + 85.053 0.0 0.0 7.7495 7.7495 92.265 0.0 0.0 0.0 70.12972058781939 9.4466474912131 9.4466474912131 9.208187539523736 0 0.4349821530037313 2.0 0.0 1.3851518780601924 SYQKANRTM;SY[AG]KANRTM;SYQKAGGRTM;SY[AG]KAGGRTM;{[{M(Oxidation (M))|F}C]|[YS]}RNAKQTM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[QT]AKQTM;SYRNS[KA]SW;{[{M(Oxidation (M))|F}C]|[YS]}RGGAKQTM;{[{M(Oxidation (M))|F}C]|[YS]}RNAK[AG]TM;[NS][YR]AKQTM 7.7495;6.9105;6.9105;6.0755;3.9699;3.6932;3.3592;3.1309;3.1309;2.932 -;-;-;-;-;-;-;-;-;- 1021 + 1 2.276 172574.3 0.5400000214576721 770 4659 5427 HBL1_DMSO_200M_050219_1,5431 HBL1_DMSO_200M_050219_1,5431,SYQKARQSM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5433 26.269 800.0 47950.0 25 0 2139.7 -1 0 51 910.0303420264582 4545.115327799291 5 910.8308593630792 MULTI CID FTMS 0 0 0 5432 20856.93359375 0.2452189565603014 1 -0.0577926635742187 1 3 E{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 3 -1 5.9421 0.0 0.0 0.13074 0.0 0.0 4136.951705625148 0.0 4136.951705625148 0.0 0.4575749056067497 0.0 0.0 0 0.0 0.0 0.0 0.0 E{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 0.13074 - 4 1 2.276 33429.1 0.4000000059604645 771 4660 5432 HBL1_DMSO_200M_050219_1,5433 HBL1_DMSO_200M_050219_1,5433, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5434 26.283 800.0 154140.0 25 0 5311.0 -1 0 83 741.7330583361462 3703.6289093477294 5 741.9332153201103 MULTI CID FTMS 0 0 0 5432 116714.5625 0.3027708376230785 -2 0.0486087799072265 2 3 ATN 3 -1 25.049 0.0 0.0 0.67635 0.0 0.0 2694.218111712206 720.2512301080686 3414.4693418202746 0.0 0.0 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 ATN 0.67635 - 112 + 1 2.276 90323.8 0.4900000095367431 772 4660 5432 HBL1_DMSO_200M_050219_1,5434 HBL1_DMSO_200M_050219_1,5434, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5435 26.297 800.0 52385.0 25 0 2788.8 -1 0 46 907.1497953613128 3624.570075578851 4 907.4015991091728 MULTI CID FTMS 0 0 0 5432 72378.78125 1.0 0 0.0 3 3 WH 2 -1 7.0783 0.0 0.0 0.19529 0.0 0.0 2737.194539545452 561.2144869440061 3298.4090264894576 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WH 0.19529 - 32 + 1 2.276 38407.8 0.3700000047683716 773 4660 5432 HBL1_DMSO_200M_050219_1,5435 HBL1_DMSO_200M_050219_1,5435, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5436 26.311 800.0 83528.0 25 0 16270.0 -1 0 42 925.6048738818532 4622.987987076265 5 926.2067138552666 MULTI CID FTMS 0 0 0 5432 65627.03125 1.0 0 0.0 4 3 E 1 -1 1.9897 0.0 0.0 0.043039 0.0 0.0 3713.59972289042 777.3182467096311 4490.917969600051 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.043039 - 4 + 1 2.276 50225.2 0.3499999940395355 774 4660 5432 HBL1_DMSO_200M_050219_1,5436 HBL1_DMSO_200M_050219_1,5436, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5438 26.316 33.0 2102900.0 25 0 298540.0 + 7518 EHTPSASVAVS 11 85 362.1805483311924 1083.5198155937774 3 362.1801330447197 MULTI CID FTMS 0 0 0 5437 1495996.125 0.8527027069391142 -1 0.0577926635742187 1 Unmodified _EHTPSASVAVS_ REV__ENSG00000181143|ENST00000397910|MUC16 27.628801355627647 0.4434699450731472 3 HVDAAEK 7 -1 42.211 0.0 0.0 3.8957 0.0 0.0 315.14461033914023 0.0 315.14461033914023 0.0 5.353582552641498 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3252574989159953 HVDAAEK 3.8957 - 342 + 1 2.291 61631.2 1.0 775 4661 5437 HBL1_DMSO_200M_050219_1,5438 HBL1_DMSO_200M_050219_1,5438,EHTPSASVAVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5439 26.32 197.0 251460.0 25 0 29213.0 -1 LSCPWNLSQG 10 88 581.272901161783 1160.531249390366 2 581.2729369997978 MULTI CID FTMS 0 0 0 5437 333566.65625 0.4708104260494566 -5 0.1775188446044922 2 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 33.4449034751529 0.2267874087365337 3 D[PS]QSAN 7 -1 54.87 0.0 0.0 4.728 0.0 0.0 443.23762709785314 0.0 443.23762709785314 0.0 33.59820670403302 0.0 0.0 0 2.2302046884880937 0.0 0.9247425010840048 0.0 D[PS]QSAN 4.728 - 326 1 2.291 41917.1 1.0 776 4661 5437 HBL1_DMSO_200M_050219_1,5439 HBL1_DMSO_200M_050219_1,5439,LSCPWNLSQG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5440 26.324 243.0 319120.0 25 0 37470.0 + 36389 SYQKARQSM 9 83 549.7711959519135 1097.5278389706268 2 549.7718994021416 MULTI CID FTMS 0 0 0 5437 307581.84375 0.7992939337551898 -1 0.0577926635742187 3 Unmodified _SYQKARQSM_ ENSG00000105656|ENST00000262809|ELL 55.23464941255904 0.0288927259679799 3 SYQKARNTM 9 2 + 90.372 0.0 0.0 8.2341 8.2341 91.85 0.0 0.0 0.0 69.56994074453036 12.587418566968154 12.587418566968154 7.95371572735597 0 1.1677353201839438 2.0 0.3807196863200844 0.805462187404089 SYQKARNTM;SYQKM[{I|L}P]TM;SY[AG]KARNTM;SYQK{[NV]|[RG]}QTM;SYQK{[NV]|[RG]}SAAM;SY[AG]KM[{I|L}P]TM;SYQK{[NV]|[RG]}S{[WS]|[C(Carbamidomethyl (C)){I|L}]};SY[AG]K{[NV]|[RG]}QTM;SYQK{[NV]|[RG]}[AG]TM;SYQK{[NV]|[RG]}AASM 8.2341;7.5094;7.3951;7.2829;6.8309;6.6704;6.5577;6.4439;6.4439;6.3352 -;-;-;-;-;-;-;-;-;- 242 + 1 2.291 62538.4 1.0 777 4661 5437 HBL1_DMSO_200M_050219_1,5440 HBL1_DMSO_200M_050219_1,5440,SYQKARQSM True True SYQKARQSM 26.32424 549.771899402142 3608713.625 5437.0 ENSG00000105656|ENST00000262809|ELL 8.80328369140625 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5441 26.338 800.0 138910.0 25 0 11162.0 -1 0 67 926.9149762252024 3703.63079903441 4 927.4149658083916 MULTI CID FTMS 0 0 0 5437 116459.2890625 0.9918424511117948 -3 0.1064014434814453 4 3 ATQG 4 -1 26.938 0.0 0.0 0.72735 0.0 0.0 2694.219019152268 649.2206514947874 3343.4396706470548 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 ATQG 0.72735 - 29 + 1 2.291 83041.2 0.4300000071525574 778 4661 5437 HBL1_DMSO_200M_050219_1,5441 HBL1_DMSO_200M_050219_1,5441, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5443 26.351 591.0 213310.0 25 0 27804.0 + 45032 YPVYLRNAW 9 99 394.5412641288374 1180.601962986712 3 394.8758727908134 MULTI CID FTMS 0 0 0 5442 79442.28125 0.7198205540430025 -6 0.2046566009521484 1 Unmodified _YPVYLRNAW_ REV__ENSG00000096006|ENST00000263045|CRISP3;REV__nc|ENSG00000096006|P54108-3|CRISP3;REV__nc|ENSG00000096006|P54108|CRISP3 21.53697664764585 0.2571576504437394 3 YPE[R{I|L}]KP[{M(Oxidation (M))|F}E] 9 -1 P[{M(Oxidation (M))|F}E] + + 48.633 10.458 2.6736 4.1193 4.1193 52.854 0.0 0.0 0.0 36.85016360239905 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.7742275032520141 YPE[R{I|L}]KP[{M(Oxidation (M))|F}E] 4.1193 - 73 + 1 2.291 105418.4 1.0 779 4662 5442 HBL1_DMSO_200M_050219_1,5443 HBL1_DMSO_200M_050219_1,5443,YPVYLRNAW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5444 26.365 800.0 85196.0 25 0 4586.4 -1 0 61 675.7092418340952 3373.509826837476 5 676.1113159060478 MULTI CID FTMS 0 0 0 5442 106708.34375 1.0 0 0.0 2 3 AT 2 -1 22.206 0.0 0.0 0.65825 0.0 0.0 2364.103618295019 834.301961407701 3198.40557970272 0.0 0.0 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 AT 0.65825 - 55 + 1 2.291 57970.8 0.4799999892711639 780 4662 5442 HBL1_DMSO_200M_050219_1,5444 HBL1_DMSO_200M_050219_1,5444, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5445 26.378 800.0 188210.0 25 0 28648.0 -1 0 202 344.6684418413077 0 344.6685363650322 PEAK CID FTMS 0 0 0 5442 96489.78125 0.6965854111941715 -19 0.5175266265869141 3 3 QS 2 -1 14.843 0.0 0.0 2.1595 0.0 0.0 163.06221219648415 306.1466463678344 469.2088585643186 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.5 QS 2.1595 - 49 + 1 2.291 118600.7 0.4199999868869781 781 4662 5442 HBL1_DMSO_200M_050219_1,5445 HBL1_DMSO_200M_050219_1,5445, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5447 26.395 800.0 92016.0 25 0 8751.4 + 34859 SQGFSHSQM 9 120 512.7109958984765 1023.4074388637532 2 512.7108032107353 MULTI CID FTMS 0 0 0 5446 91341.609375 0.0126038520516809 67 -1.0839920043945312 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 86.33184430468982 0.0159826143231117 3 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 64.279 0.0 0.0 6.2808 6.2808 85.562 0.0 0.0 0.0 6.305971595366842 6.305971595366842 6.305971595366842 6.305971595366842 0 1.492992819099939 1.0 1.0501648626366045 1.048455006504028 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}SQ;{[QS]|[NT]}G[MN]S{I|L}[C(Carbamidomethyl (C))Q];{[QS]|[NT]}G[MN]SWSQ;{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}SQ;{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F} 6.2808;5.6647;5.3811;4.9885;4.9421;4.7029;4.3413;4.0835;4.0424;3.8599 -;-;-;-;-;-;-;-;-;- 716 1 2.291 60546.6 0.4600000083446502 782 4663 5446 HBL1_DMSO_200M_050219_1,5447 HBL1_DMSO_200M_050219_1,5447,SQGFSHSQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5448 26.406 645.0 128700.0 25 0 11731.0 + 28818 QAAGAAVKHS 10 113 470.25464119222727 938.4947294512546 2 470.2545043826103 MULTI CID FTMS 0 0 0 5446 96098.953125 0.7901118551534889 -1 0.0403633117675781 2 Unmodified _QAAGAAVKHS_ REV__ENST00000320623.9_1_16:69752155-69760649:-|nuORF 38.17557092003332 0.1768326257063233 3 [QA]AQ 4 -1 48.645 0.0 0.0 5.1833 0.0 0.0 0.0 537.2798606370545 537.2798606370545 37.38610266688188 0.0 0.0 0.0 0 1.5 1.0457574905606752 0.0 0.8494850021680094 [QA]AQ 5.1833 - 154 1 2.291 68280.9 1.0 783 4663 5446 HBL1_DMSO_200M_050219_1,5448 HBL1_DMSO_200M_050219_1,5448,QAAGAAVKHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5451 26.417 246.0 314510.0 25 0 34608.0 + -1 SVRYSSSKH 9 105 364.8531768259513 1091.537701078054 3 364.8526794314384 MULTI CID FTMS 0 0 0 5450 265427.3125 0.7541431742584204 3 -0.0286827087402343 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SVRYSSSKH_ ENSG00000186395|ENST00000269576|KRT10;P13645 23.015651743759182 0.2383437472277672 3 EVRYSSSKH 9 -1 + 53.087 0.0 0.0 4.8635 4.8635 88.091 0.0 0.0 0.0 27.681146847855096 7.944087325889988 7.944087325889988 53.08722197026278 0 1.579689690656103 0.0 0.0 0.0 EVRYSSSKH 4.8635 - 194 + 1 2.301 68921.4 1.0 784 4665 5450 HBL1_DMSO_200M_050219_1,5451 HBL1_DMSO_200M_050219_1,5451,SVRYSSSKH False False SVRYSSSKH 26.416738 364.852679431438 2093911.390625 5450.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 3.658839066823324 3.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5452 26.431 800.0 123770.0 25 0 12965.0 -1 NEAGKASCTTH 11 136 588.2577136681803 1174.5008744031604 2 588.2570678591728 MULTI CID FTMS 0 0 0 5450 81584.9765625 0.5949742966709078 -8 0.249185562133789 2 Carbamidomethyl (C) _NEAGKASC(Carbamidomethyl (C))TTH_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 24.99096001346401 0.505407273373304 3 DQQAEDHQ 8 -1 55.883 0.0 0.0 4.7581 0.0 0.0 88.06104692879724 132.0452822320922 220.10632916088943 0.0 0.0 0.0 0.0 0 0.6421590589602533 0.0 0.0 1.1861818737241734 DQQAEDHQ 4.7581 - 1577 + 1 2.301 77452.1 0.6200000047683716 785 4665 5450 HBL1_DMSO_200M_050219_1,5452 HBL1_DMSO_200M_050219_1,5452,NEAGKASCTTH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5456 26.455 800.0 38642.0 25 0 2526.2 -1 0 34 797.5566266439733 3982.746750886866 5 797.9593383669853 MULTI CID FTMS 0 0 0 5455 36427.6015625 0.6303466354724325 1 -0.0300922393798828 1 3 Y 1 -1 10.485 0.0 0.0 0.26325 0.0 0.0 1903.8338993452955 1912.8127702683023 3816.6466696135976 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 Y 0.26325 - 3 + 1 2.301 30525.1 0.5 786 4668 5455 HBL1_DMSO_200M_050219_1,5456 HBL1_DMSO_200M_050219_1,5456, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5457 26.469 800.0 28411.0 25 0 1515.3 -1 0 52 745.089952544241 2976.330704310564 4 745.5932494997978 MULTI CID FTMS 0 0 0 5455 73491.7109375 1.0 0 0.0 2 3 W 1 -1 15.485 0.0 0.0 0.52026 0.0 0.0 2772.2406449617342 0.0 2772.2406449617342 0.0 11.989700043360187 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.52026 - 4 + 1 2.301 26664.3 0.5400000214576721 787 4668 5455 HBL1_DMSO_200M_050219_1,5457 HBL1_DMSO_200M_050219_1,5457, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5461 26.482 185.0 231890.0 25 0 18230.0 + 35715 SVHEEVQEK 9 77 542.7671295927397 1083.519706252279 2 542.7667724490166 MULTI CID FTMS 0 0 0 5460 193203.1875 0.2157466191564789 9 -0.157693862915039 1 Unmodified _SVHEEVQEK_ REV__ENSG00000141013|ENST00000268699|GAS8;REV__nc|ENSG00000141013|O95995-2|GAS8 41.95555342248728 0.0647214845423414 3 [VS]EHVDAAEK 10 -1 + 91.961 0.0 0.0 8.4872 8.4872 97.751 0.0 0.0 0.0 68.57123154459948 16.888793896675267 16.888793896675267 39.20310309343897 0 2.353917193908117 2.0 0.805462187404089 0.2742275032520141 [VS]EHVDAAEK;{[YC]|[HE]}VSVDAAEK;{[YC]|[HE]}VSVDAAA[VS];{[YC]|[HE]}VWWAEK;{[YC]|[HE]}VWWAA[VS];{[YC]|[HE]}VSVD{[NV]|[RG]}[VS] 8.4872;4.8691;4.0233;3.1004;2.2456;2.1968 -;-;-;-;-;- 117 + 1 2.301 36457.7 1.0 788 4671 5460 HBL1_DMSO_200M_050219_1,5461 HBL1_DMSO_200M_050219_1,5461,SVHEEVQEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5462 26.49 411.0 113490.0 25 0 7377.3 8401 ESENRSYE 8 87 507.2121599427971 1012.4097669523942 2 507.2122375369072 MULTI CID FTMS 0 0 0 5460 92938.8828125 0.2933445366132723 -13 0.2718677520751953 2 Unmodified _ESENRSYE_ ENSG00000100241|ENST00000380817|SBF1;ENST00000444527.2_1_8:56362086-56362449:-|nuORF;nc|ENSG00000100241|O95248-4|SBF1;nc|ENSG00000100241|O95248|SBF1 18.13498045792455 0.6430038125133779 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QE{[WT]|[RM]}SE 8 4 + 37.422 0.0 0.0 3.6963 3.6963 80.983 0.0 0.0 0.0 17.179250024847263 15.783409326844264 15.783409326844264 9.262137858390812 0 0.0 0.0 0.9005149978319906 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QE{[WT]|[RM]}SE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]E{[WT]|[RM]}SE;{[ES]|[DT]|[{I|L}C]}{[WT]|[RM]}{M(Oxidation (M))|F}QSE;{[ES]|[DT]|[{I|L}C]}{[WT]|[RM]}{M(Oxidation (M))|F}[AG]SE;{[ES]|[DT]|[{I|L}C]}[YQ][RD]SE 3.6963;2.7814;1.4177;0.50289;0.37948 -;-;-;-;- 89 + 1 2.301 43947.8 1.0 789 4671 5460 HBL1_DMSO_200M_050219_1,5462 HBL1_DMSO_200M_050219_1,5462,ESENRSYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5463 26.503 800.0 98465.0 25 0 15193.0 + 3437 CCESPKGSRE 10 107 548.2312193549312 1094.4478857766624 2 548.2319824099541 MULTI CID FTMS 0 0 0 5460 113775.4140625 0.7152491133579673 -11 0.2232589721679687 3 Unmodified _CCESPKGSRE_ REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF 13.042465956692816 0.6287021003332052 3 SPE[C(Carbamidomethyl (C))D] 5 -1 34.309 0.0 0.0 3.1348 0.0 0.0 488.2726307599625 0.0 488.2726307599625 0.0 21.544883842919766 0.0 0.0 0 0.8807196863200843 0.0 0.805462187404089 0.0 SPE[C(Carbamidomethyl (C))D] 3.1348 - 118 1 2.301 66025.2 0.6200000047683716 790 4671 5460 HBL1_DMSO_200M_050219_1,5463 HBL1_DMSO_200M_050219_1,5463,CCESPKGSRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5464 26.517 800.0 88321.0 25 0 10078.0 38363 TQPWVDPGE 9 102 514.7393679815422 1027.4641830298842 2 514.7390624880791 MULTI CID FTMS 0 0 0 5460 89547.390625 1.0 0 0.0 4 Unmodified _TQPWVDPGE_ ENSG00000138759|ENST00000512123|FRAS1;nc|ENSG00000138759|Q86XX4|FRAS1 14.838274106304384 0.4350285940865338 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DPNDPNP 9 7 + 50.465 0.0 0.0 4.9116 4.9116 74.525 0.0 0.0 0.0 7.147642715192504 1.497623203333319 1.497623203333319 1.497623203333319 0 0.0 0.0 0.3807196863200844 1.610924374808178 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DPNDPNP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DPNDPPN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DPGGDPNP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DPGGDPPN;[QT]PYYD{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DYYPNP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DPNDPGGP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DYYPPN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YYDPNP;[QT]YYPD{[QN]|[E{I|L}]|[KN]} 4.9116;4.7659;4.0154;3.8697;3.6853;3.3519;3.2743;3.2061;2.6455;2.6345 -;-;-;-;-;-;-;-;-;- 369 + 1 2.301 64012.9 0.5799999833106995 791 4671 5460 HBL1_DMSO_200M_050219_1,5464 HBL1_DMSO_200M_050219_1,5464,TQPWVDPGE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5467 26.538 800.0 60359.0 25 0 5049.5 -1 0 66 672.5522672551083 2686.179963154033 4 673.0530883669853 MULTI CID FTMS 0 0 0 5466 80580.078125 1.0 0 0.0 1 3 GGGSS 5 -1 32.959 0.0 0.0 1.227 0.0 0.0 979.4110765644352 1358.6143355558622 2338.025412120297 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 GGGSS 1.227 - 236 + 1 2.317 44731.7 0.4799999892711639 792 4673 5466 HBL1_DMSO_200M_050219_1,5467 HBL1_DMSO_200M_050219_1,5467, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5468 26.546 469.0 147520.0 25 0 25920.0 28820 QAAHPTFPA 9 96 470.2390884366677 938.4636239401354 2 470.2392455935478 MULTI CID FTMS 0 0 0 5466 82756.8046875 0.8416580603506292 -4 0.0527763366699218 2 Unmodified _QAAHPTFPA_ ENSG00000053747|ENST00000313654|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3 15.847184025352805 0.4077185912009129 3 [QA][RN][QA]AH 8 7 20.384 0.0 0.0 2.1721 0.0 0.0 0.0 58.99618920063429 58.99618920063429 7.619974565770036 0.0 0.0 0.0 0 0.4247425010840047 0.619788758288394 0.0 0.805462187404089 [QA][RN][QA]AH 2.1721 - 145 1 2.317 59191.0 1.0 793 4673 5466 HBL1_DMSO_200M_050219_1,5468 HBL1_DMSO_200M_050219_1,5468,QAAHPTFPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5471 26.566 800.0 185330.0 25 0 11886.0 -1 KELRNKQMK 9 154 397.5605790247758 1189.6599076745274 3 397.5605041384697 MULTI CID FTMS 0 0 0 5470 144396.515625 0.3899146062356451 -11 0.1439476013183593 1 Oxidation (M) _KELRNKQM(Oxidation (M))K_ ENSG00000154781|ENST00000383794|CCDC174 20.41453444215458 0.284085796332423 3 [KT]T[PA]S[{I|L}P]TTK 11 -1 42.783 0.0 0.0 3.5962 0.0 0.0 0.0 60.97587469375517 60.97587469375517 24.99600744907621 0.0 0.0 0.0 0 0.7614393726401688 0.0 1.841129063296272 1.1307196863200843 [KT]T[PA]S[{I|L}P]TTK 3.5962 - 611 1 2.317 118745.6 0.6899999976158142 794 4675 5470 HBL1_DMSO_200M_050219_1,5471 HBL1_DMSO_200M_050219_1,5471,KELRNKQMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5474 26.586 800.0 124270.0 25 0 12500.0 + 22889 LSCPWNLSQG 10 143 581.272901161783 1160.531249390366 2 581.2729369997978 MULTI CID FTMS 0 0 0 5473 206368.359375 0.2912772406353824 11 -0.1894550323486328 1 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 72.96794272382148 0.0188410189619069 3 DPSQSAN 7 8 81.367 0.0 0.0 7.0112 0.0 0.0 443.2368336408219 0.0 443.2368336408219 0.0 46.53900960645494 0.0 0.0 0 1.5629529932484498 0.0 1.3494850021680094 1.079689690656103 DPSQSAN 7.0112 - 2951 1 2.331 77568.2 0.8100000023841858 795 4677 5473 HBL1_DMSO_200M_050219_1,5474 HBL1_DMSO_200M_050219_1,5474,LSCPWNLSQG True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5475 26.6 800.0 201440.0 25 0 22865.0 -1 RGILAEMK 8 163 467.2629083962872 932.5112638593744 2 467.2628967165947 MULTI CID FTMS 0 0 0 5473 90827.296875 0.1314509943149696 -32 0.7293338775634766 2 Oxidation (M) _RGILAEM(Oxidation (M))K_ ENSG00000169105|ENST00000306243|CHST14 21.74664581756881 0.5868176546531598 3 QT{M(Oxidation (M))|F}K 4 -1 37.211 0.0 0.0 3.9904 0.0 0.0 410.26963895878686 0.0 410.26963895878686 0.0 19.41499608413835 0.0 0.0 0 1.0 0.0 0.0 0.3054621874040891 QT{M(Oxidation (M))|F}K 3.9904 - 472 + 1 2.331 131297.8 0.5299999713897705 796 4677 5473 HBL1_DMSO_200M_050219_1,5475 HBL1_DMSO_200M_050219_1,5475,RGILAEMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5476 26.614 800.0 142650.0 25 0 11866.0 + 34668 SPQVEHPNR 9 136 532.2668092164578 1062.5190654997157 2 532.2667114138603 MULTI CID FTMS 0 0 0 5473 90973.5 0.5017151091173386 -8 0.101572036743164 3 Unmodified _SPQVEHPNR_ REV__ENSG00000129521|ENST00000250457|EGLN3 14.838274106304384 0.4350285940865338 3 [PS]QRDSS{I|L} 8 -1 45.082 0.0 0.0 4.2429 0.0 0.0 0.0 189.0905171771988 189.0905171771988 21.69316290795148 0.0 0.0 0.0 0 0.3252574989159953 1.3010299956639813 0.7614393726401688 0.6505149978319906 [PS]QRDSS{I|L} 4.2429 - 1452 1 2.331 94718.9 0.5299999713897705 797 4677 5473 HBL1_DMSO_200M_050219_1,5476 HBL1_DMSO_200M_050219_1,5476,SPQVEHPNR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5479 26.634 800.0 181160.0 25 0 33012.0 -1 0 183 344.6684418413077 0 344.6685363650322 PEAK CID FTMS 0 0 0 5478 107102.640625 0.7732024675902891 -2 0.0476856231689453 1 3 YESG 4 -1 22.102 0.0 0.0 3.2156 0.0 0.0 180.0900958371542 68.05126367740468 248.14135951455887 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.5387254899964358 0.0 YESG 3.2156 - 43 + 1 2.331 118684.2 0.5099999904632568 798 4679 5478 HBL1_DMSO_200M_050219_1,5479 HBL1_DMSO_200M_050219_1,5479, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5482 26.654 800.0 125140.0 25 0 9956.6 + 45033 YPVYLRNAW 9 130 394.5412641288374 1180.601962986712 3 394.5413696169853 MULTI CID FTMS 0 0 0 5481 67833.8125 0.3337601917672469 14 -0.2837638854980469 1 Unmodified _YPVYLRNAW_ REV__ENSG00000096006|ENST00000263045|CRISP3;REV__nc|ENSG00000096006|P54108-3|CRISP3;REV__nc|ENSG00000096006|P54108|CRISP3 16.149105407346934 0.3995459350917656 3 YPE[R{I|L}]QD 7 -1 37.523 0.0 0.0 3.1783 0.0 0.0 0.0 276.1235445611938 276.1235445611938 24.75899433273387 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.805462187404089 YPE[R{I|L}]QD 3.1783 - 112 + 1 2.331 84123.5 0.4799999892711639 799 4681 5481 HBL1_DMSO_200M_050219_1,5482 HBL1_DMSO_200M_050219_1,5482,YPVYLRNAW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5486 26.672 410.0 232580.0 25 0 23407.0 + 36030 SVQHVDAAEK 10 117 361.8527124309203 1082.5363078929608 3 361.8520690798759 MULTI CID FTMS 0 0 0 5485 84312.5546875 0.0522170143515022 47 -0.8128929138183594 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 27.22323531849824 0.3570408936368626 3 HVDAAEK 7 3 28.276 0.0 0.0 2.612 0.0 0.0 314.16116919905204 0.0 314.16116919905204 0.0 8.878041644171898 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3054621874040891 + HVDAAEK 2.612 + + 424 + 1 2.348 83908.7 1.0 800 4684 5485 HBL1_DMSO_200M_050219_1,5486 HBL1_DMSO_200M_050219_1,5486,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5487 26.686 800.0 25723.0 25 0 1018.5 -1 0 52 730.8195722608543 2919.249183177017 4 731.3230468630791 MULTI CID FTMS 0 0 0 5485 79553.2578125 1.0 0 0.0 2 3 W 1 -1 16.99 0.0 0.0 0.58199 0.0 0.0 2715.1591085693985 0.0 2715.1591085693985 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.58199 - 10 + 1 2.348 25498.9 0.5400000214576721 801 4684 5485 HBL1_DMSO_200M_050219_1,5487 HBL1_DMSO_200M_050219_1,5487, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5490 26.706 800.0 71145.0 25 0 2862.1 -1 0 59 826.8720467864489 3303.4590812793954 4 827.1229125857353 MULTI CID FTMS 0 0 0 5489 62096.71484375 0.4016091642148355 -2 0.0275287628173828 1 3 AT 2 -1 22.206 0.0 0.0 0.67221 0.0 0.0 2294.0508884782425 834.3016451471311 3128.352533625374 0.0 0.0 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 AT 0.67221 - 14 + 1 2.348 47532.9 0.5199999809265137 802 4686 5489 HBL1_DMSO_200M_050219_1,5490 HBL1_DMSO_200M_050219_1,5490, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5491 26.72 800.0 132940.0 25 0 6292.2 -1 0 102 660.6194052432504 1978.836386329951 3 660.6205322146416 MULTI CID FTMS 0 0 0 5489 104076.0234375 0.2895442340020212 -2 0.0275287628173828 2 3 [PS]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EESAPSTG[DV]QGSH 19 -1 [PS]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EESA + + 56.513 41.242 4.1433 2.8559 2.8559 49.926 0.0 0.0 0.0 0.0 15.270723656429452 0.0 0.0 0 0.4247425010840047 0.0 0.6549471895720985 2.221848749616356 [PS]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EESAPSTG[DV]QGSH 2.8559 - 2114 + 1 2.348 86789.4 0.5799999833106995 803 4686 5489 HBL1_DMSO_200M_050219_1,5491 HBL1_DMSO_200M_050219_1,5491, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5493 26.736 800.0 23763.0 25 0 1286.4 -1 0 47 806.1519764621785 4025.723499977892 5 806.5542480349541 MULTI CID FTMS 0 0 0 5492 35195.48828125 0.6028584850636701 1 -0.0396995544433593 1 3 S 1 -1 5.7133 0.0 0.0 0.14192 0.0 0.0 3219.872805253086 715.7827242486936 3935.65552950178 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 S 0.14192 - 7 + 1 2.348 24232.0 0.3600000143051147 804 4687 5492 HBL1_DMSO_200M_050219_1,5493 HBL1_DMSO_200M_050219_1,5493, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5494 26.74 183.0 461950.0 25 0 42213.0 + 27329 LPHEQRKV 8 104 336.1983282861154 1005.573155458546 3 336.1979858279228 MULTI CID FTMS 0 0 0 5492 271797.9375 0.8360613804595508 -1 0.0301113128662109 2 Unmodified _PHRQEKVI_ ENSG00000103591|ENST00000261880|AAGAB;nc|ENSG00000103591|Q6PD74-2|AAGAB 7.910154910731844 0.7763180056447161 3 {I|L}PHE 4 6 41.558 0.0 0.0 4.1327 0.0 0.0 0.0 526.3114532810353 526.3114532810353 30.298528877963705 0.0 0.0 0.0 0 0.1923877696554315 0.7695510786217261 0.0 0.0 {I|L}PHE 4.1327 - 41 + 1 2.348 73153.1 1.0 805 4687 5492 HBL1_DMSO_200M_050219_1,5494 HBL1_DMSO_200M_050219_1,5494,PHRQEKVI False False LPHEQRKV 26.739623 336.197985827923 1456507.375 5492.0 ENSG00000103591|ENST00000261880|AAGAB;;nc|ENSG00000103591|Q6PD74-2|AAGAB 2.320206433534622 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5495 26.746 336.0 363610.0 25 0 117020.0 11064 GEAHPEAT 8 115 406.1829022280288 810.3512515228576 2 406.1827575564384 MULTI CID FTMS 0 0 0 5492 159935.25 0.1737011532452637 -20 0.2853660583496094 3 Unmodified _GEAHPEAT_ ENSG00000132938|ENST00000612955|MTUS2 18.13498045792455 0.6430038125133779 3 [HT]SSTS 6 7 31.234 0.0 0.0 3.8544 0.0 0.0 0.0 207.077956785852 207.077956785852 11.86181873724173 0.0 0.0 0.0 0 0.75 0.0 0.6109243748081782 0.0 [HT]SSTS 3.8544 - 264 1 2.348 98335.5 1.0 806 4687 5492 HBL1_DMSO_200M_050219_1,5495 HBL1_DMSO_200M_050219_1,5495,GEAHPEAT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5496 26.76 800.0 166440.0 25 0 16952.0 -1 0 78 990.4251951659594 1978.8358373987187 2 990.9293090701104 MULTI CID FTMS 0 0 0 5492 128841.8984375 0.5473915746158015 -1 0.0301113128662109 4 3 SA{[RE]|[WV]}[RD]QGSH 10 -1 49.627 0.0 0.0 2.5079 0.0 0.0 837.3267564434437 0.0 837.3267564434437 0.0 32.63682493045401 0.0 0.0 0 1.3807196863200843 0.0 0.3807196863200844 0.6861818737241735 SA{[RE]|[WV]}[RD]QGSH 2.5079 - 496 + 1 2.348 93428.9 0.4600000083446502 807 4687 5492 HBL1_DMSO_200M_050219_1,5496 HBL1_DMSO_200M_050219_1,5496, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5498 26.77 349.0 173880.0 25 0 13431.0 8402 ESENRSYE 8 94 507.2121599427971 1012.4097669523942 2 507.2123901247978 MULTI CID FTMS 0 0 0 5497 238370.90625 0.7523740432415371 4 -0.1384601593017578 1 Unmodified _ESENRSYE_ ENSG00000100241|ENST00000380817|SBF1;ENST00000444527.2_1_8:56362086-56362449:-|nuORF;nc|ENSG00000100241|O95248-4|SBF1;nc|ENSG00000100241|O95248|SBF1 24.67388899826682 0.525179942228231 3 QE{[WT]|[RM]}SE 6 4 38.773 0.0 0.0 3.8298 0.0 0.0 234.08495171760245 0.0 234.08495171760245 0.0 25.27819381628923 0.0 0.0 0 0.0 0.0 1.0356668758921828 0.0 QE{[WT]|[RM]}SE 3.8298 - 335 + 1 2.36 50927.6 1.0 808 4688 5497 HBL1_DMSO_200M_050219_1,5498 HBL1_DMSO_200M_050219_1,5498,ESENRSYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5499 26.773 186.0 514850.0 25 0 69854.0 + 43578 YADRARKI 8 91 331.526227185515 991.556852156745 3 331.5257140994072 MULTI CID FTMS 0 0 0 5497 329513.15625 0.8826058096982319 -1 0.0396995544433593 2 Unmodified _YADRARKI_ ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A 27.628801355627647 0.4629596117395134 3 YADR{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L} 8 0 + 54.59 0.0 0.0 5.5055 5.5055 88.706 0.0 0.0 0.0 33.62063790808534 3.187587626244124 3.187587626244124 17.37888070366388 0 0.0 1.3979400086720375 0.0 0.8494850021680094 + + YADR{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L};YWR{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L};YW[VG]{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L} 5.5055;3.7528;2.8118 +;-;- + 38 + 1 2.36 81882.4 1.0 809 4688 5497 HBL1_DMSO_200M_050219_1,5499 HBL1_DMSO_200M_050219_1,5499,YADRARKI False True YADRARKI 26.773171 331.525714099407 1691724.5 5497.0 nc|ENSG00000090889|O95239-2|KIF4A;;ENSG00000226650|ENST00000435029|KIF4B;;ENSG00000090889|ENST00000374403|KIF4A 1.5390341331561406 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5500 26.783 547.0 146570.0 25 0 25345.0 + 3438 CCESPKGSRE 10 106 548.2312193549312 1094.4478857766624 2 548.2315551638603 MULTI CID FTMS 0 0 0 5497 153634.3125 0.9658220688752844 6 -0.1586132049560547 3 Unmodified _CCESPKGSRE_ REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF 13.042465956692816 0.6287021003332052 3 SPE[C(Carbamidomethyl (C))D] 5 -1 39.08 0.0 0.0 3.5708 0.0 0.0 488.27110488105626 0.0 488.27110488105626 0.0 25.10090614668492 0.0 0.0 0 0.8807196863200843 0.0 0.805462187404089 0.0 SPE[C(Carbamidomethyl (C))D] 3.5708 - 127 1 2.36 65341.2 1.0 810 4688 5497 HBL1_DMSO_200M_050219_1,5500 HBL1_DMSO_200M_050219_1,5500,CCESPKGSRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5501 26.793 558.0 199840.0 25 0 29236.0 -1 TRITPTMK 8 114 482.26812777186586 962.5217026105316 2 482.2681762576103 MULTI CID FTMS 0 0 0 5497 147758.078125 0.5005147249987085 -4 0.0973396301269531 4 Oxidation (M) _TRITPTM(Oxidation (M))K_ ENSG00000135447|ENST00000257905|PPP1R1A 25.399314129420983 0.5099049743284904 3 [KT]TP{I|L}ETK 8 -1 51.196 0.0 0.0 5.3189 0.0 0.0 0.0 60.97574860393027 60.97574860393027 32.21639407645036 0.0 0.0 0.0 0 0.5 0.0 1.610924374808178 0.2742275032520141 [KT]TP{I|L}ETK 5.3189 - 576 1 2.36 88845.8 1.0 811 4688 5497 HBL1_DMSO_200M_050219_1,5501 HBL1_DMSO_200M_050219_1,5501,TRITPTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5502 26.806 800.0 73560.0 25 0 2731.2 -1 0 72 743.13002958062 3710.6137655701 5 743.5308715701103 MULTI CID FTMS 0 0 0 5497 114460.84375 0.7340590658748782 -12 0.193521499633789 5 3 S 1 -1 8.4949 0.0 0.0 0.22893 0.0 0.0 2743.203866743731 877.3468111627561 3620.550677906487 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 S 0.22893 - 35 + 1 2.36 51616.0 0.4799999892711639 812 4688 5497 HBL1_DMSO_200M_050219_1,5502 HBL1_DMSO_200M_050219_1,5502, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5503 26.82 800.0 108110.0 25 0 10817.0 + 36155 SVVEHSKSV 9 119 486.2617713829746 970.5089898327492 2 486.2625915408134 MULTI CID FTMS 0 0 0 5497 95571.203125 1.0 0 0.0 6 Unmodified _SVVEHSKSV_ ENSG00000088448|ENST00000267339|ANKRD10 28.49450938151212 0.1686335738423394 3 [VS]VEHSKSV 9 0 + 67.507 0.0 0.0 6.9558 6.9558 92.004 0.0 0.0 0.0 38.703103648725374 10.947661712595362 10.947661712595362 11.216360500091618 0 0.7742275032520141 2.0 0.8494850021680094 0.0 + + [VS]VEHSKSV;[VS]VEA[Q{I|L}]EP;[VS]VEA{[CP]|[EA]}VAP;[VS]V{[CP]|[EA]}AEVAP;[VS]VEHS[VS]K;[VS]VERREP;[VS]VEA{[CP]|[EA]}[PA]V;{NN|[MP]|[D{I|L}]|[EV]}G{[TV]|[{I|L}S]}AEVAP;[VS]VE[RD]VAP;[VS]V[RD]EVAP 6.9558;5.8001;5.4578;5.3598;5.1942;4.7403;4.6528;4.6355;4.3925;4.2944 +;-;-;-;-;-;-;-;-;- + 348 + 1 2.36 71359.1 0.449999988079071 813 4688 5497 HBL1_DMSO_200M_050219_1,5503 HBL1_DMSO_200M_050219_1,5503,SVVEHSKSV False True SVVEHSKSV 26.8202 486.262591540813 437888.9375 5497.0 ENSG00000088448|ENST00000267339|ANKRD10 6.570377667744954 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5505 26.827 158.0 402560.0 25 0 39388.0 -1 KELRNKQMK 9 87 397.5605790247758 1189.6599076745274 3 397.5605041384697 MULTI CID FTMS 0 0 0 5504 260610.734375 0.7037284205562729 3 -0.0778312683105468 1 Oxidation (M) _KELRNKQM(Oxidation (M))K_ ENSG00000154781|ENST00000383794|CCDC174 16.565877749689598 0.3882643987948875 3 S[{I|L}P]T{M(Oxidation (M))|F}K 6 -1 33.99 0.0 0.0 2.8571 0.0 0.0 498.29023940254064 0.0 498.29023940254064 0.0 16.325768889002386 0.0 0.0 0 1.110924374808178 0.0 0.5 0.0 S[{I|L}P]T{M(Oxidation (M))|F}K 2.8571 - 62 1 2.369 54752.6 1.0 814 4689 5504 HBL1_DMSO_200M_050219_1,5505 HBL1_DMSO_200M_050219_1,5505,KELRNKQMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5506 26.841 800.0 104280.0 25 0 29447.0 -1 0 39 1105.4520883708603 3313.334435712781 3 1105.787280261517 MULTI CID FTMS 0 0 0 5504 220703.71875 0.9214648544464557 -3 0.1304397583007812 2 3 YG 2 -1 8.5835 0.0 0.0 0.25906 0.0 0.0 1781.619300070006 1308.6138399713502 3090.2331400413564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.25906 - 42 + 1 2.369 86099.7 0.3499999940395355 815 4689 5504 HBL1_DMSO_200M_050219_1,5506 HBL1_DMSO_200M_050219_1,5506, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5507 26.85 546.0 126260.0 25 0 11899.0 + -1 LSFEEMTER 9 74 592.2706289295294 1182.526704925859 2 592.2697021365166 MULTI CID FTMS 0 0 0 5504 117931.3203125 1.0 0 0.0 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSFEEMTER_ REV__ENSG00000268964|ENST00000601417|ERVV-2 27.628801355627647 0.1796483985696185 3 THEQSER 7 -1 53.915 0.0 0.0 4.5593 0.0 0.0 297.13390131999614 0.0 297.13390131999614 0.0 50.81628600175304 0.0 0.0 0 1.5629529932484498 0.0 0.6382104921644451 0.0 THEQSER 4.5593 - 102 + 1 2.369 60294.4 1.0 816 4689 5504 HBL1_DMSO_200M_050219_1,5507 HBL1_DMSO_200M_050219_1,5507,LSFEEMTER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5509 26.857 218.0 331590.0 25 0 51745.0 -1 IRAPTTMK 8 79 467.2629083962872 932.5112638593744 2 467.2627441287041 MULTI CID FTMS 0 0 0 5508 369684.8125 0.5350311839968884 -19 0.3741722106933594 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 22.736283301280096 0.5659792798204337 3 QT{M(Oxidation (M))|F}K 4 -1 40.279 0.0 0.0 4.3195 0.0 0.0 410.2644509705056 0.0 410.2644509705056 0.0 17.769702487817227 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.3252574989159953 QT{M(Oxidation (M))|F}K 4.3195 - 144 + 1 2.369 61116.7 1.0 817 4690 5508 HBL1_DMSO_200M_050219_1,5509 HBL1_DMSO_200M_050219_1,5509,IRAPTTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5510 26.871 800.0 74791.0 25 0 9765.4 -1 EPTQAFMLT 9 107 527.2512620274841 1052.4879711217682 2 527.2514526247978 MULTI CID FTMS 0 0 0 5508 90582.9375 0.6419373541405805 -4 0.1607723236083984 2 Oxidation (M) _EPTQAFM(Oxidation (M))LT_ ENSG00000137337|ENST00000376406|MDC1;nc|ENSG00000137337|Q14676-2|MDC1;nc|ENSG00000137337|Q14676-3|MDC1;nc|ENSG00000137337|Q14676-4|MDC1 13.90604991867851 0.4602628045680013 3 [EP]AASA 6 -1 37.497 0.0 0.0 3.5627 0.0 0.0 0.0 523.2258610966306 523.2258610966306 24.0018312907727 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.9247425010840048 0.0 [EP]AASA 3.5627 - 433 1 2.369 50414.6 0.4399999976158142 818 4690 5508 HBL1_DMSO_200M_050219_1,5510 HBL1_DMSO_200M_050219_1,5510,EPTQAFMLT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5511 26.885 800.0 113200.0 25 0 6385.9 -1 0 98 441.2276992068578 1760.8816909610312 4 441.2272827029228 MULTI CID FTMS 0 0 0 5508 85185.6875 0.9078156229201346 3 -0.0513896942138671 3 3 QP 2 -1 22.664 0.0 0.0 1.2871 0.0 0.0 1517.762037246306 0.0 1517.762037246306 0.0 1.6944517631652012 0.0 0.0 0 0.1694451763165201 0.0 0.0 0.0 QP 1.2871 - 297 1 2.369 81193.2 0.4099999964237213 819 4690 5508 HBL1_DMSO_200M_050219_1,5511 HBL1_DMSO_200M_050219_1,5511, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5513 26.898 627.0 191030.0 25 0 35160.0 -1 0 158 344.6684418413077 0 344.6684448122978 PEAK CID FTMS 0 0 0 5512 98054.96875 0.7078849163247574 10 -0.0851879119873046 1 3 QS 2 -1 17.008 0.0 0.0 2.4746 0.0 0.0 163.0642263566404 306.14594446353755 469.210170820178 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.3807196863200844 0.5 QS 2.4746 - 28 + 1 2.369 98076.2 1.0 820 4691 5512 HBL1_DMSO_200M_050219_1,5513 HBL1_DMSO_200M_050219_1,5513, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5516 26.918 800.0 153450.0 25 0 10071.0 + 30519 VIKMGVAAHKKSHE 14 138 384.4685547955695 1533.8451133158778 4 384.7188293337822 MULTI CID FTMS 0 0 0 5515 63347.6953125 0.5219153460717889 -4 0.0817222595214843 1 Unmodified _REKEVKRYLWQ_ ENSG00000143546|ENST00000368733|S100A8 0.4545168274142398 0.8730034954726786 3 [{I|L}V]KMRAAHKK 10 10 65.513 0.0 0.0 4.2712 0.0 0.0 0.0 368.1212557428344 368.1212557428344 53.48803113628041 0.0 0.0 0.0 0 0.1139829889124311 1.3979400086720375 0.0 0.4247425010840047 [{I|L}V]KMRAAHKK 4.2712 - 778 + 1 2.369 101754.7 0.5299999713897705 821 4693 5515 HBL1_DMSO_200M_050219_1,5516 HBL1_DMSO_200M_050219_1,5516,REKEVKRYLWQ False False VIKMGVAAHKKSHE 26.918128 384.4683 701811.75 5515.0 ENSG00000143546|ENST00000368733|S100A8 8.199089845021566 4.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5519 26.938 800.0 139860.0 25 0 9267.5 + 24135 LYQEGAKM 8 138 478.2307032434573 954.4468535537146 2 478.2310363650322 MULTI CID FTMS 0 0 0 5518 117496.234375 0.6232615976579864 -7 0.1622848510742187 1 Oxidation (M) _LYQEGAKM(Oxidation (M))_ ENSG00000173801|ENST00000393931|JUP 61.357469665136826 0.1155423183535659 3 {I|L}YQEGAK{M(Oxidation (M))|F} 8 0 + 91.68 0.0 0.0 9.6056 9.6056 91.848 0.0 0.0 0.0 76.98760662364698 12.5190243216651 12.5190243216651 6.409780573583319 0 0.7302046884880937 2.0 0.8807196863200843 0.4247425010840047 + + {I|L}YQEGAK{M(Oxidation (M))|F};{I|L}YQEQK{M(Oxidation (M))|F};{I|L}Y[AG]EGAK{M(Oxidation (M))|F};{I|L}Y[AG]EQK{M(Oxidation (M))|F};{I|L}YQEG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A;{I|L}YQE[KS]{[MG]|[TS]};{I|L}Y[AG]EG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A;{I|L}Y[AG]E[KS]{[MG]|[TS]};{I|L}YQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[DS]|[MA]|[CV]|TT}A;{I|L}[WC(Carbamidomethyl (C))]KYW 9.6056;8.934;8.6352;7.9564;7.2721;6.3073;6.3016;5.3369;4.8906;1.8945 +;-;-;-;-;-;-;-;-;- + 337 + 1 2.369 92775.7 0.5699999928474426 822 4695 5518 HBL1_DMSO_200M_050219_1,5519 HBL1_DMSO_200M_050219_1,5519,LYQEGAKM True False LYQEGAKM 26.938066 478.231036365032 860040.6875 5518.0 ENSG00000173801|ENST00000393931|JUP 6.09060796101888 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5525 26.97 800.0 41207.0 25 0 2369.6 -1 0 63 660.6194052432504 1978.836386329951 3 660.6192504763603 MULTI CID FTMS 0 0 0 5524 71825.5859375 0.1998220490669367 12 -0.1280593872070312 1 3 PSTG[DV]Q[SG]H 10 -1 27.943 0.0 0.0 1.4121 0.0 0.0 995.3944094711476 0.0 995.3944094711476 0.0 13.250481569446748 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.6109243748081782 PSTG[DV]Q[SG]H 1.4121 - 208 + 1 2.369 33847.7 0.5699999928474426 823 4700 5524 HBL1_DMSO_200M_050219_1,5525 HBL1_DMSO_200M_050219_1,5525, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5531 26.995 424.0 164070.0 25 0 52640.0 + 9234 FGSIYDNILNF 11 77 434.88189555394223 0 434.8817016482353 PEAK CID FTMS 0 0 0 5530 204121.71875 0.7653746757914731 -3 0.011667251586914 1 Unmodified _FGSIYDNILNF_ REV__ENSG00000147251|ENST00000276202|DOCK11;REV__ENST00000553480.1_1_14:45332380-45332650:-|nuORF 3.072263186857199 0.4761840153648598 3 A{M(Oxidation (M))|F} 2 -1 5.9691 0.0 0.0 0.68788 0.0 0.0 362.488326164722 284.1611422174438 646.6494683821658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{M(Oxidation (M))|F} 0.68788 - 4 + 1 2.379 61721.8 1.0 824 4705 5530 HBL1_DMSO_200M_050219_1,5531 HBL1_DMSO_200M_050219_1,5531,FGSIYDNILNF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5533 27.0 89.0 716870.0 25 0 128730.0 37150 THSSGEPP 8 86 406.1829022280288 810.3512515228576 2 406.1826049685478 MULTI CID FTMS 0 0 0 5532 741553.5625 0.8053803586100237 -1 0.0099430084228515 1 Unmodified _THSSGEPP_ nc|ENSG00000284797|A0A2R8Y7Y5|CIST1 13.50788311687929 0.7113601687236069 3 [HT]SSTS 6 4 29.988 0.0 0.0 3.7006 0.0 0.0 0.0 207.0785447866033 207.0785447866033 14.459157999737666 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.5501648626366046 0.0 [HT]SSTS 3.7006 - 139 1 2.379 59527.2 1.0 825 4706 5532 HBL1_DMSO_200M_050219_1,5533 HBL1_DMSO_200M_050219_1,5533,THSSGEPP False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 5534 27.014 800.0 77016.0 25 0 5523.1 11158 GEKTPKDESAN 11 110 588.2807561317103 1174.5469593302205 2 588.2801391482353 MULTI CID FTMS 0 0 0 5532 102624.015625 0.9656208197961224 -3 0.0176124572753906 2 Unmodified _GEKTPKDESAN_ ENSG00000125753|ENST00000245932|VASP;ENST00000588463.1_1_19:46026053-46027140:+|nuORF;ENST00000590459.1_1_19:46026044-46026986:+|nuORF 28.49450938151212 0.4231428536161201 3 {[DA]|[EG]}SVS{I|L}PSQSAN 12 7 + 64.898 0.0 0.0 5.5253 5.5253 84.645 0.0 0.0 0.0 8.061799739838868 9.877203139966326 8.061799739838868 8.061799739838868 0 1.3182503180159344 1.0457574905606752 1.424742501084005 0.0 {[DA]|[EG]}SVS{I|L}PSQSAN;{[SA]|[TG]}DVS{I|L}PSQSAN;{[DA]|[EG]}SVS{I|L}PS[AG]SAN;WWS{I|L}PSQSAN;{[SA]|[TG]}DVS{I|L}PS[AG]SAN;WWS{I|L}PS[AG]SAN;[VS]{[DA]|[EG]}S{I|L}PSQSAN;[VS]{[DA]|[EG]}S{I|L}PS[AG]SAN 5.5253;4.839;4.7507;4.5135;4.0643;3.7332;3.271;2.4964 -;-;-;-;-;-;-;- 221 1 2.379 52514.4 0.4699999988079071 826 4706 5532 HBL1_DMSO_200M_050219_1,5534 HBL1_DMSO_200M_050219_1,5534,GEKTPKDESAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5538 27.038 800.0 99212.0 25 0 7799.4 + + -1 SQGFSHSQM 9 138 513.2030187602406 1024.3914845872812 2 513.2024413943291 MULTI CID FTMS 0 0 0 5537 51722.22265625 0.0786971220564141 -8 0.0521717071533203 1 Oxidation (M) _GASEGWGTNM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16 30.63653989081413 0.2803493085145199 3 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}QS 9 -1 + 62.664 0.0 0.0 6.1172 6.1172 77.859 0.0 0.0 0.0 16.722535675202252 19.906111717311305 16.722535675202252 1.074842526208485 0 1.0629529932484498 0.6777807052660807 0.6861818737241735 0.7302046884880937 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}QS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}ET{[CA]|SS}S;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}[AG]S;{[QS]|[NT]}G[MD]SWQS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}TE{[CA]|SS}S;{[QS]|[NT]}G[Q{I|L}]CE{[CA]|SS}S;{[QS]|[NT]}{[WN]|[YH]}E{M(Oxidation (M))|F}QS;{[QS]|[NT]}{[WN]|[YH]}ET{[CA]|SS}S;{[QS]|[NT]}G[MD]SW[AG]S;{[QS]|[NT]}{[WN]|[YH]}E{M(Oxidation (M))|F}[AG]S 6.1172;6.0122;5.2183;5.1578;4.9583;4.8363;4.7719;4.6618;4.2589;3.8678 -;-;-;-;-;-;-;-;-;- 867 1 2.379 62658.3 0.6200000047683716 827 4709 5537 HBL1_DMSO_200M_050219_1,5538 HBL1_DMSO_200M_050219_1,5538,GASEGWGTNM False False SQGFSHSQM 27.038274 513.202441394329 0.0 5537.0 ENSG00000181143|ENST00000397910|MUC16 1.6323677847782772 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5539 27.052 800.0 79917.0 25 0 11009.0 + 3439 CCESPKGSRE 10 87 548.2312193549312 1094.4478857766624 2 548.2310668826103 MULTI CID FTMS 0 0 0 5537 86451.765625 0.543479003974836 27 -0.4848155975341797 2 Unmodified _CCESPKGSRE_ REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF 8.155526934196011 0.6889124077178598 3 SPE[C(Carbamidomethyl (C))D] 5 -1 22.619 0.0 0.0 2.0667 0.0 0.0 488.2681446759781 0.0 488.2681446759781 0.0 8.015384402724592 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 SPE[C(Carbamidomethyl (C))D] 2.0667 - 50 1 2.379 55891.5 0.6000000238418579 828 4709 5537 HBL1_DMSO_200M_050219_1,5539 HBL1_DMSO_200M_050219_1,5539,CCESPKGSRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5541 27.064 535.0 202710.0 25 0 27481.0 + -1 GVGNKLTMK 9 116 482.26812777186586 962.5217026105316 2 482.2684814333916 MULTI CID FTMS 0 0 0 5540 172440.65625 0.5841243249560274 18 -0.3835296630859375 1 Oxidation (M) _GVGNKLTM(Oxidation (M))K_ REV__ENST00000604354.1_1_5:180743383-180748792:+|nuORF 34.40172386719151 0.1061884637610825 3 ST{M(Oxidation (M))|F}K 4 -1 44.964 0.0 0.0 4.6715 0.0 0.0 481.3059871337724 0.0 481.3059871337724 0.0 17.83166198865886 0.0 0.0 0 1.5669015600442575 0.0 0.4896518287104437 0.3252574989159953 ST{M(Oxidation (M))|F}K 4.6715 - 739 + 1 2.379 88589.9 1.0 829 4710 5540 HBL1_DMSO_200M_050219_1,5541 HBL1_DMSO_200M_050219_1,5541,GVGNKLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5542 27.078 800.0 57657.0 25 0 2174.7 -1 0 60 743.13002958062 3710.6137655701 5 743.3320800662041 MULTI CID FTMS 0 0 0 5540 108396.109375 0.7258476146591828 2 -0.029510498046875 2 3 S 1 -1 6.9897 0.0 0.0 0.18837 0.0 0.0 2587.1654756304497 1033.4005831354127 3620.566058765862 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.18837 - 21 + 1 2.379 42414.9 0.4600000083446502 830 4710 5540 HBL1_DMSO_200M_050219_1,5542 HBL1_DMSO_200M_050219_1,5542, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5545 27.093 480.0 256000.0 25 0 29983.0 -1 VVSAAHCYK 9 143 345.5078087568887 1033.5015968708665 3 345.5077087283134 MULTI CID FTMS 0 0 0 5544 155142.75 0.7675329876583407 -1 0.0039100646972656 1 Carbamidomethyl (C) _VVSAAHC(Carbamidomethyl (C))YK_ CON__P00761;ENSG00000010438|ENST00000379405|PRSS3;nc|ENSG00000010438|P35030-2|PRSS3;nc|ENSG00000010438|P35030-4|PRSS3;nc|ENSG00000010438|P35030-5|PRSS3;nc|ENSG00000010438|P35030|PRSS3 17.44264345198275 0.3645313841742926 3 VVSAAH[YC(Carbamidomethyl (C))]K 9 -1 + 52.246 0.0 0.0 5.0552 5.0552 76.945 0.0 0.0 0.0 24.13734275855269 2.798859261803983 2.798859261803983 2.798859261803983 0 0.2614393726401688 1.6989700043360187 0.0 0.1549471895720985 VVSAAH[YC(Carbamidomethyl (C))]K;VVSAAH[C(Carbamidomethyl (C))K]Y;VVSAA[NG]{[C(Carbamidomethyl (C))E]|[WC]}K;VVSAA[YV]DNP;VVSAA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[ET]|[MV]}P;VV[QT]H[YC(Carbamidomethyl (C))]K;VV[QT]H[C(Carbamidomethyl (C))K]Y;VVSAA[C(Carbamidomethyl (C))H]{[HG]|PP}P;VVSAA{[{M(Oxidation (M))|F}D]|MM}[QT]P;VVSAA[YV]DGGP 5.0552;4.7844;3.488;3.1861;3.0683;2.9054;2.6346;2.4858;2.4858;2.2994 +;-;-;-;-;-;-;-;-;- + 335 + 1 2.387 103052.0 1.0 831 4712 5544 HBL1_DMSO_200M_050219_1,5545 HBL1_DMSO_200M_050219_1,5545,VVSAAHCYK False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 5546 27.106 800.0 131570.0 25 0 9774.2 + 40341 VHLTPEEK 8 121 476.7586587206793 951.5027645081584 2 476.7582885622978 MULTI CID FTMS 0 0 0 5544 101059.78125 0.7624455970765059 -3 0.0596466064453125 2 Unmodified _VHLTPEEK_ ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 81.89019881105858 0.0835893570953205 3 VH{I|L}T[EP]EK 8 0 + 89.396 0.0 0.0 9.3952 9.3952 96.93 0.0 0.0 0.0 28.62826806974688 15.160614775013356 15.160614775013356 15.160614775013356 0 1.8283409326844264 1.2218487496163564 1.579689690656103 0.2742275032520141 + + VH{I|L}T[EP]EK;VH{I|L}T[EP]{[SA]|[TG]}V;VHR{[{M(Oxidation (M))|F}H]|[RQ]}EK;VHR{[{M(Oxidation (M))|F}H]|[RQ]}{[SA]|[TG]}V;VH{I|L}[HN]HPV;VH{I|L}[HN]HVP;[HV]{I|L}T[EP]{[SA]|[TG]}V;[HV][HQ]VPHV;VH[HQ]VHPV;VH[HQ]VHVP 9.3952;7.8019;6.7403;5.1398;4.7397;4.3368;4.0991;3.9794;3.9219;3.519 +;-;-;-;-;-;-;-;-;- + 569 + 1 2.387 85084.3 0.5899999737739563 832 4712 5544 HBL1_DMSO_200M_050219_1,5546 HBL1_DMSO_200M_050219_1,5546,VHLTPEEK True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5547 27.12 800.0 185640.0 25 0 13784.0 19911 LHWLEEAEK 9 181 385.53198792131207 1153.5741343641362 3 385.5313903689384 MULTI CID FTMS 0 0 0 5544 91822.96875 0.7522201628980266 -3 0.0596466064453125 3 Unmodified _LHWLEEAEK_ ENSG00000165914|ENST00000328459|TTC7B;nc|ENSG00000165914|Q86TV6-2|TTC7B 17.11289562659939 0.3734572693229295 3 {[SA]|[TG]}VQHVDAAEK 11 8 {[SA]|[TG]}VQ + + 32.366 14.123 3.6665 2.8057 2.8057 49.817 0.0 0.0 0.0 0.0 18.24297643832785 0.0 0.0 0 1.305462187404089 0.0 0.3494850021680094 0.2742275032520141 {[SA]|[TG]}VQHVDAAEK 2.8057 - 825 + 1 2.387 124952.1 0.5400000214576721 833 4712 5544 HBL1_DMSO_200M_050219_1,5547 HBL1_DMSO_200M_050219_1,5547,LHWLEEAEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5549 27.125 100.0 620360.0 25 0 88577.0 -1 RGILAEMK 8 82 467.2629083962872 932.5112638593744 2 467.2628356814384 MULTI CID FTMS 0 0 0 5548 668788.5 0.9679129109435703 4 -0.1189479827880859 1 Oxidation (M) _RGILAEM(Oxidation (M))K_ ENSG00000169105|ENST00000306243|CHST14 20.453626601364224 0.6087503291685402 3 {I|L}T{M(Oxidation (M))|F}K 4 -1 35.974 0.0 0.0 3.8578 0.0 0.0 425.2513600080094 0.0 425.2513600080094 0.0 17.237059521965108 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 {I|L}T{M(Oxidation (M))|F}K 3.8578 - 128 1 2.387 51831.1 1.0 834 4713 5548 HBL1_DMSO_200M_050219_1,5549 HBL1_DMSO_200M_050219_1,5549,RGILAEMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5550 27.137 672.0 163860.0 25 0 12253.0 + 36031 SVQHVDAAEK 10 146 361.8520632421621 0 361.8520995974541 PEAK CID FTMS 0 0 0 5548 44889.61328125 0.4138240588729486 -5 0.1021041870117187 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 19.62595529434964 0.3012834457640212 3 VD 2 8 9.464 0.0 0.0 1.3114 0.0 0.0 90.37021545814214 414.1997164361938 504.5699318943359 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + VD 1.3114 + + 60 + 1 2.387 93476.9 1.0 835 4713 5548 HBL1_DMSO_200M_050219_1,5550 HBL1_DMSO_200M_050219_1,5550,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5551 27.147 581.0 174770.0 25 0 23141.0 41696 VPSDHTNE 8 127 449.69831174076495 897.3820705483299 2 449.6985351443291 MULTI CID FTMS 0 0 0 5548 166967.0625 0.3979764150967991 -5 0.1021041870117187 3 Unmodified _VPSDHTNE_ ENSG00000152558|ENST00000398136|TMEM123;ENST00000529492.5_1_11:102272638-102323261:-|nuORF;nc|ENSG00000152558|Q8N131-2|TMEM123 24.67388899826682 0.525179942228231 3 {[ES]|[DT]|[{I|L}C]}VQYWS 7 7 + 34.986 0.0 0.0 3.8986 3.8986 75.523 0.0 0.0 0.0 10.906749338831943 12.48316654335258 10.906749338831943 4.124567145349804 0 0.3252574989159953 0.0 0.2215141619232908 0.7614393726401688 {[ES]|[DT]|[{I|L}C]}VQYWS;{[ES]|[DT]|[{I|L}C]}V[WY]QS;{[ES]|[DT]|[{I|L}C]}VQSYW;{[ES]|[DT]|[{I|L}C]}VQYSW;{[ES]|[DT]|[{I|L}C]}V[AG]YWS;{[ES]|[DT]|[{I|L}C]}[YR]EQS;{[ES]|[DT]|[{I|L}C]}VTNYW;{[YC]|[HE]}T[PA]EQS;{[QV]|[N{I|L}]|[RA]|[KV]}{[ES]|[DT]|[{I|L}C]}YWS;[HT]E[PA]EQS 3.8986;3.439;2.3412;2.3412;2.0104;1.7382;1.6703;1.6261;1.3607;1.2857 -;-;-;-;-;-;-;-;-;- 728 + 1 2.387 82942.2 1.0 836 4713 5548 HBL1_DMSO_200M_050219_1,5551 HBL1_DMSO_200M_050219_1,5551,VPSDHTNE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5552 27.157 612.0 253110.0 25 0 101750.0 -1 0 126 388.2145561122457 387.20727964564566 1 388.2147399783134 MULTI CID FTMS 0 0 0 5548 117112.390625 0.1693377206225033 -31 0.4658489227294922 4 3 QQ{I|L} 3 -1 QQ + + 14.604 3.835 1.4974 3.7716 3.7716 51.937 0.0 0.0 0.0 0.0 2.3769935465922174 0.0 0.0 0 0.0 0.0 0.0 0.0 QQ{I|L} 3.7716 - 21 + 1 2.387 127012.0 1.0 837 4713 5548 HBL1_DMSO_200M_050219_1,5552 HBL1_DMSO_200M_050219_1,5552, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5553 27.171 800.0 73691.0 25 0 1941.6 -1 0 76 804.9816764059743 4019.871999696871 5 805.3854858279228 MULTI CID FTMS 0 0 0 5548 58260.51953125 0.5100141972546411 -3 0.0680084228515625 5 3 NPTA 4 -1 10.522 0.0 0.0 0.26174 0.0 0.0 2947.353153116597 686.3231295221311 3633.676282638728 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NPTA 0.26174 - 105 + 1 2.387 52415.5 0.3799999952316284 838 4713 5548 HBL1_DMSO_200M_050219_1,5553 HBL1_DMSO_200M_050219_1,5553, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5556 27.181 212.0 251800.0 25 0 32750.0 -1 0 79 438.4870182395388 1749.9189670917551 4 438.4868347048759 MULTI CID FTMS 0 0 0 5555 172061.328125 0.1850937065963059 -3 0.0933971405029296 1 3 V{I|L}QMG[Q{I|L}]HK 9 -1 67.669 0.0 0.0 3.867 0.0 0.0 0.0 712.2890108697874 712.2890108697874 57.21130963036558 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 V{I|L}QMG[Q{I|L}]HK 3.867 - 146 + 1 2.387 48762.2 1.0 839 4715 5555 HBL1_DMSO_200M_050219_1,5556 HBL1_DMSO_200M_050219_1,5556, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5557 27.195 800.0 117120.0 25 0 9071.5 + 43873 YFPDVDGK 8 126 470.7220812445044 939.4296095558088 2 470.7220947146416 MULTI CID FTMS 0 0 0 5555 63601.65625 0.4678684986288099 -2 0.0548992156982421 2 Unmodified _YFPDVDGK_ REV__ENSG00000137731|ENST00000292079|FXYD2;REV__ENST00000317594.6_1_11:117693022-117695420:-|nuORF;REV__ENST00000534383.5_1_11:117691389-117694973:-|nuORF;REV__nc|ENSG00000137731|P54710-2|FXYD2 20.453626601364224 0.6087503291685402 3 HVQEEK 6 -1 57.428 0.0 0.0 6.1131 0.0 0.0 171.0540870902824 0.0 171.0540870902824 0.0 46.16877490631719 0.0 0.0 0 2.1549471895720984 0.0 0.75 0.3252574989159953 HVQEEK 6.1131 - 668 + 1 2.387 75044.2 0.6600000262260437 840 4715 5555 HBL1_DMSO_200M_050219_1,5557 HBL1_DMSO_200M_050219_1,5557,YFPDVDGK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5559 27.211 800.0 88560.0 25 0 7322.3 -1 0 88 584.3138386758699 1749.9196866278094 3 584.3137084841728 MULTI CID FTMS 0 0 0 5558 54302.69921875 0.2120234445325323 -5 0.1174869537353515 1 3 V{I|L}KMRAAHKK[WM]DH 14 -1 + 96.254 0.0 0.0 5.5005 5.5005 74.484 0.0 0.0 0.0 84.4710593095537 1.752701723759003 1.752701723759003 0.2996322337744459 0 0.4247425010840047 2.0 0.3807196863200844 0.4247425010840047 V{I|L}KMRAAHKK[WM]DH;V{I|L}KMRAAHKKS{[ET]|[MV]}DH;V{I|L}KM[VG]AAHKK[WM]DH;V{I|L}KM[VG]AAHKKS{[ET]|[MV]}DH;[HS][{M(Oxidation (M))|F}E]SKKHAARMK{[HG]|PP};V[Q{I|L}]MRAAHKKS{[ET]|[MV]}DH;[KT]{[QN]|[E{I|L}]|[KN]}RAAHKK[WM]DH;[KT]{[QN]|[E{I|L}]|[KN]}RAAHKKS{[ET]|[MV]}DH;[HS][{M(Oxidation (M))|F}E]SKKHAAR[PG][W{I|L}];[HS][{M(Oxidation (M))|F}E]SKKHA[RP]K[W{I|L}] 5.5005;5.4833;4.9833;4.9673;2.9677;2.7379;1.6836;1.6664;1.1932;0.6389 -;-;-;-;-;-;-;-;-;- 279 + 1 2.387 60609.9 0.4600000083446502 841 4716 5558 HBL1_DMSO_200M_050219_1,5559 HBL1_DMSO_200M_050219_1,5559, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5560 27.225 800.0 23924.0 25 0 1078.1 -1 0 41 822.5886589213417 4107.906912273708 5 822.7891723513603 MULTI CID FTMS 0 0 0 5558 99236.015625 1.0 0 0.0 2 3 P 1 -1 6.9897 0.0 0.0 0.17015 0.0 0.0 1641.763977762934 2366.0685870085526 4007.8325647714864 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.17015 - 1 + 1 2.387 21777.5 0.4699999988079071 842 4716 5558 HBL1_DMSO_200M_050219_1,5560 HBL1_DMSO_200M_050219_1,5560, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5561 27.239 800.0 36582.0 25 0 2142.4 -1 0 56 678.0495327689225 2708.16902520929 4 678.3010742068291 MULTI CID FTMS 0 0 0 5558 92116.671875 1.0 0 0.0 3 3 W 1 -1 13.495 0.0 0.0 0.4983 0.0 0.0 2504.079499918077 0.0 2504.079499918077 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.4983 - 38 + 1 2.387 31917.5 0.4699999988079071 843 4716 5558 HBL1_DMSO_200M_050219_1,5561 HBL1_DMSO_200M_050219_1,5561, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5563 27.257 800.0 28211.0 25 0 2202.6 -1 0 46 974.0916296608196 2919.253059582659 3 974.4275390505792 MULTI CID FTMS 0 0 0 5562 83667.3359375 1.0 0 0.0 1 3 W 1 -1 16.99 0.0 0.0 0.58199 0.0 0.0 2715.162923939884 0.0 2715.162923939884 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.58199 - 25 + 1 2.399 27184.9 0.3600000143051147 844 4717 5562 HBL1_DMSO_200M_050219_1,5563 HBL1_DMSO_200M_050219_1,5563, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5566 27.271 418.0 407460.0 25 0 38042.0 + 21811 LPNKQRTV 8 190 319.1944305476026 954.561462243008 3 319.1940490603447 MULTI CID FTMS 0 0 0 5565 158013.3125 0.5419056818460708 -4 0.0857372283935546 1 Unmodified _LPNKQRTV_ ENSG00000078061|ENST00000377045|ARAF;ENSG00000132155|ENST00000251849|RAF1;ENSG00000157764|ENST00000646891|BRAF;ENST00000445336.2_1_X:74802783-74803698:+|nuORF;ENST00000469930.1_1_7:140534396-140624503:-|nuORF;nc|ENSG00000078061|P10398-2|ARAF;nc|ENSG00000132155|P04049-2|RAF1;RAF1-EIF3L|1|fusion 12.872603262515298 0.7207451919503449 3 {I|L}PNKQ 5 3 43.672 0.0 0.0 4.5751 0.0 0.0 0.0 371.2050875299438 371.2050875299438 33.06182483046563 0.0 0.0 0.0 0 0.0 0.0 0.0 1.110924374808178 + {I|L}PNKQ 4.5751 + + 242 + 1 2.399 138704.1 1.0 845 4719 5565 HBL1_DMSO_200M_050219_1,5566 HBL1_DMSO_200M_050219_1,5566,LPNKQRTV False True LPNKQRTV 27.270676 319.194049060345 1287224.625 5565.0 RAF1-EIF3L|1|fusion;;ENSG00000078061|ENST00000377045|ARAF;;ENSG00000157764|ENST00000646891|BRAF;;nc|ENSG00000078061|P10398-2|ARAF;;ENST00000469930.1_1_7:140534396-140624503:-|nuORF;;nc|ENSG00000132155|P04049-2|RAF1;;ENST00000445336.2_1_X:74802783-74803698:+|nuORF;;ENSG00000132155|ENST00000251849|RAF1 4.994724591573079 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5567 27.284 800.0 161020.0 25 0 49666.0 + 43739 YDRYRCLTVN 10 96 434.88189555394223 0 434.8819152712822 PEAK CID FTMS 0 0 0 5565 166070.625 0.6226983171915031 11 -0.2015571594238281 2 Unmodified _YDRYRCLTVN_ REV__ENSG00000185101|ENST00000332826|ANO9;REV__ENST00000528927.5_1_11:418373-431830:-|nuORF;REV__ENST00000534161.5_1_11:418373-429524:-|nuORF;REV__nc|ENSG00000185101|A1A5B4-2|ANO9 3.2813086475875832 0.3961065659209837 3 A 1 -1 3.0989 0.0 0.0 0.35712 0.0 0.0 362.4882346119876 431.1921480768188 793.6803826888064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.35712 - 1 + 1 2.399 103758.0 0.7400000095367432 846 4719 5565 HBL1_DMSO_200M_050219_1,5567 HBL1_DMSO_200M_050219_1,5567,YDRYRCLTVN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5569 27.289 110.0 434450.0 25 0 32640.0 -1 HYTNQTDM 8 89 513.2030187602406 1024.3914845872812 2 513.2031127810478 MULTI CID FTMS 0 0 0 5568 535117.9375 0.8142001538080716 3 -0.0668106079101562 1 Oxidation (M) _HYTNQTDM(Oxidation (M))_ ENSG00000173612|ENST00000310357|GPRC6A;nc|ENSG00000173612|Q5T6X5-2|GPRC6A;nc|ENSG00000173612|Q5T6X5-3|GPRC6A 28.486842064014134 0.4448922141344407 3 {[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}QTD{M(Oxidation (M))|F} 9 -1 + 44.487 0.0 0.0 4.3428 4.3428 74.004 0.0 0.0 0.0 2.2577249674798594 10.330145895351848 2.2577249674798594 2.2577249674798594 0 0.7429928190999391 0.0 1.0952788787511374 0.7742275032520141 {[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}QTD{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTD{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTD{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}[AG]TD{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TD{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TD{M(Oxidation (M))|F};[HS][YQ]QTD{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}{[QS]|[NT]};[HS][YQ][AG]TD{M(Oxidation (M))|F} 4.3428;4.1224;3.8438;3.4439;3.2235;2.9396;2.8839;2.4541;2.2337;1.9798 -;-;-;-;-;-;-;-;-;- 256 1 2.399 42846.9 1.0 847 4720 5568 HBL1_DMSO_200M_050219_1,5569 HBL1_DMSO_200M_050219_1,5569,HYTNQTDM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5570 27.302 746.0 57351.0 25 0 12399.0 -1 0 31 1061.3642825328898 2120.71401213258 2 1061.865405261517 MULTI CID FTMS 0 0 0 5568 71654.984375 0.4768859607846399 -1 0.0236282348632812 2 3 D 1 -1 3.0989 0.0 0.0 0.14613 0.0 0.0 1796.6084725529415 206.0536287897094 2002.6621013426509 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.14613 - 7 + 1 2.399 46926.8 1.0 848 4720 5568 HBL1_DMSO_200M_050219_1,5570 HBL1_DMSO_200M_050219_1,5570, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5571 27.316 800.0 349950.0 25 0 47405.0 + 23944 IPREEQRKV 9 208 385.5593659698404 1153.6562685097213 3 385.5589477419853 MULTI CID FTMS 0 0 0 5568 123997.59375 0.3109723568580492 -2 0.0277862548828125 3 Unmodified _LVRGPAEREK_ ENST00000490519.1_1_1:182845328-182845691:+|nuORF;ENSG00000135829|ENST00000367549|DHX9 24.99096001346401 0.4071966087057876 3 [VS]AQ[{M(Oxidation (M))|F}V]R[PG]V 10 9 35.598 0.0 0.0 3.0857 0.0 0.0 0.0 110.06105692359134 110.06105692359134 11.562040841011008 0.0 0.0 0.0 0 0.1803115997617927 2.0 0.6694451763165201 0.4247425010840047 [VS]AQ[{M(Oxidation (M))|F}V]R[PG]V 3.0857 - 1723 1 2.399 224076.8 0.5 849 4720 5568 HBL1_DMSO_200M_050219_1,5571 HBL1_DMSO_200M_050219_1,5571,LVRGPAEREK False False IPREEQRKV 27.315984 385.558947741985 1677425.5 5568.0 ENST00000490519.1_1_1:182845328-182845691:+|nuORF;;ENSG00000135829|ENST00000367549|DHX9 1.9832573334376016 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5572 27.33 800.0 38538.0 25 0 1520.1 -1 0 67 826.8713271796037 3303.4562028520145 4 827.3748046755791 MULTI CID FTMS 0 0 0 5568 82494.53125 1.0 0 0.0 4 3 AT 2 -1 16.638 0.0 0.0 0.50366 0.0 0.0 2294.0500164231025 834.3029445109157 3128.3529609340185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 AT 0.50366 - 18 + 1 2.399 32831.2 0.4000000059604645 850 4720 5568 HBL1_DMSO_200M_050219_1,5572 HBL1_DMSO_200M_050219_1,5572, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5574 27.347 800.0 105370.0 25 0 9683.5 + -1 GVGNKLTMK 9 122 482.26812777186586 962.5217026105316 2 482.2682983279228 MULTI CID FTMS 0 0 0 5573 53871.7578125 0.1824848318879043 29 -0.3791961669921875 1 Oxidation (M) _GVGNKLTM(Oxidation (M))K_ REV__ENST00000604354.1_1_5:180743383-180748792:+|nuORF 24.020572477871973 0.2255576514309169 3 KTTS 4 -1 39.144 0.0 0.0 4.0669 0.0 0.0 63.99864739681329 478.28144251041255 542.2800899072258 0.0 0.0 0.0 0.0 0 1.1237125054200234 0.0 1.3494850021680094 0.0 KTTS 4.0669 - 219 + 1 2.408 69914.4 0.5799999833106995 851 4721 5573 HBL1_DMSO_200M_050219_1,5574 HBL1_DMSO_200M_050219_1,5574,GVGNKLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5577 27.36 333.0 355650.0 25 0 60738.0 + 36489 TADPRSREV 9 106 344.18081005806846 1029.5206007744057 3 344.1806213259697 MULTI CID FTMS 0 0 0 5576 205012.03125 0.1505608383396464 -21 0.3774032592773437 1 Unmodified _TADPRSREV_ ENSG00000132361|ENST00000651024|CLUH 17.11289562659939 0.3734572693229295 3 TADV 4 5 40.863 0.0 0.0 3.9692 0.0 0.0 0.0 640.3168614890424 640.3168614890424 28.09919198808376 0.0 0.0 0.0 0 0.9436726795685342 1.5228787452803376 0.0 0.0 TADV 3.9692 - 126 + 1 2.408 98302.5 1.0 852 4723 5576 HBL1_DMSO_200M_050219_1,5577 HBL1_DMSO_200M_050219_1,5577,TADPRSREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5580 27.38 800.0 67121.0 25 0 8216.8 + 6795 EEANNDLENK 10 100 588.2618297391471 1174.509106545094 2 588.2632324099541 MULTI CID FTMS 0 0 0 5579 46346.6875 0.5441092170405086 1 -0.0161952972412109 1 Unmodified _EEANNDLENK_ CON__P35527;ENSG00000171403|ENST00000246662|KRT9 49.52724829834842 0.0829255630816734 3 EEANND{I|L}ENK 10 0 + 80.455 0.0 0.0 6.8501 6.8501 89.911 0.0 0.0 0.0 19.540086201695743 9.424283177894836 9.424283177894836 9.164539485499262 0 0.3054621874040891 1.5228787452803376 0.5 0.9247425010840048 + + EEANND{I|L}ENK;EEANND{I|L}EGGK;EEANGGD{I|L}ENK;EEAGGND{I|L}ENK;EEANND{I|L}EKN;EEANGGD{I|L}EGGK;EEAGGND{I|L}EGGK;EEAGGGGD{I|L}ENK;EEAGGND{I|L}EKN;EEANGGD{I|L}EKN 6.8501;6.0698;6.0698;6.0698;6.0477;5.2926;5.2926;5.2926;5.2674;5.2674 +;-;-;-;-;-;-;-;-;- + 473 + 1 2.408 45250.7 0.550000011920929 853 4725 5579 HBL1_DMSO_200M_050219_1,5580 HBL1_DMSO_200M_050219_1,5580,EEANNDLENK True True EEANNDLENK 27.37978 588.263232409954 500065.96875 5579.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 8.365544637044271 2.0 True 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 5582 27.385 129.0 463300.0 25 0 72353.0 + -1 QKAQLAMK 8 67 467.2629083962872 932.5112638593744 2 467.2629272341728 MULTI CID FTMS 0 0 0 5581 464451.09375 0.6721829250091584 17 -0.2144241333007812 1 Oxidation (M) _QKAQLAM(Oxidation (M))K_ REV__nc|ENSG00000196233|Q96JN0-2|LCOR;REV__nc|ENSG00000196233|Q96JN0|LCOR 12.531546534597751 0.7257836412119636 3 KT[{I|L}P][WP]K 7 -1 33.517 0.0 0.0 3.5943 0.0 0.0 63.9988389089428 0.0 63.9988389089428 0.0 20.417885138426897 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.3054621874040891 KT[{I|L}P][WP]K 3.5943 - 74 + 1 2.408 58098.0 1.0 854 4726 5581 HBL1_DMSO_200M_050219_1,5582 HBL1_DMSO_200M_050219_1,5582,QKAQLAMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5583 27.399 800.0 136970.0 25 0 30987.0 + 30042 QTSSVNWY 8 103 492.72351892143774 983.4324849096756 2 492.7234680056572 MULTI CID FTMS 0 0 0 5581 107277.9375 0.4000435365220262 -9 0.1406078338623047 2 Unmodified _QTSSVNWY_ REV__ENSG00000215251|ENST00000380266|FASTKD5 21.74664581756881 0.5868176546531598 3 [QT]S 3 -1 29.498 0.0 0.0 2.9995 0.0 0.0 0.0 664.2716016911786 664.2716016911786 14.80520557062638 0.0 0.0 0.0 0 0.5 1.154901959985743 0.2887254899964357 0.2614393726401688 [QT]S 2.9995 + + 183 1 2.408 89248.4 0.5 855 4726 5581 HBL1_DMSO_200M_050219_1,5583 HBL1_DMSO_200M_050219_1,5583,QTSSVNWY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5584 27.412 800.0 84763.0 25 0 3086.1 -1 0 64 927.160845899186 3704.614277730344 4 927.4144775271416 MULTI CID FTMS 0 0 0 5581 76155.796875 0.2061232328232013 -9 0.1406078338623047 3 3 S{[QD]|[EN]|[WG]|[KD]|[RS]} 3 -1 11.695 0.0 0.0 0.31568 0.0 0.0 3356.4868190895227 0.0 3356.4868190895227 0.0 1.2371250542002343 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 S{[QD]|[EN]|[WG]|[KD]|[RS]} 0.31568 - 26 + 1 2.408 53860.3 0.3799999952316284 856 4726 5581 HBL1_DMSO_200M_050219_1,5584 HBL1_DMSO_200M_050219_1,5584, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5586 27.422 319.0 240860.0 25 0 28817.0 13117 HETPAQES 8 126 449.69831174076495 897.3820705483299 2 449.6974975466728 MULTI CID FTMS 0 0 0 5585 230344.171875 0.5490397111181939 9 -0.0944805145263671 1 Unmodified _HETPAQES_ ENST00000290573.6_1_2:75061256-75061319:+|nuORF 13.50788311687929 0.7113601687236069 3 {[ES]|[DT]|[{I|L}C]}VQ[WY]S 7 6 + 29.983 0.0 0.0 3.3411 3.3411 71.784 0.0 0.0 0.0 7.041354707735774 5.800259691528247 5.800259691528247 2.6211192963361185 0 0.2614393726401688 0.0 0.1861818737241735 0.7302046884880937 {[ES]|[DT]|[{I|L}C]}VQ[WY]S;{[ES]|[DT]|[{I|L}C]}VQH[DP]S;{[DA]|[EG]}AHEE{[QV]|[N{I|L}]|[RA]|[KV]};{[DA]|[EG]}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}QS;{[ES]|[DT]|[{I|L}C]}[C(Carbamidomethyl (C))K][C(Carbamidomethyl (C))K]S;{[ES]|[DT]|[{I|L}C]}V[AG][WY]S;{[ES]|[DT]|[{I|L}C]}V[AG]H[DP]S;{[QV]|[N{I|L}]|[RA]|[KV]}{[ES]|[DT]|[{I|L}C]}[WY]S;[WM][{M(Oxidation (M))|F}T]S{[QV]|[N{I|L}]|[RA]|[KV]};{[CP]|[EA]}PTHEQS 3.3411;3.049;2.3627;2.061;1.6995;1.4877;1.2032;0.93125;0.86814;0.77703 -;-;-;-;-;-;-;-;-;- 672 + 1 2.417 63626.8 1.0 857 4727 5585 HBL1_DMSO_200M_050219_1,5586 HBL1_DMSO_200M_050219_1,5586,HETPAQES False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5587 27.436 800.0 152210.0 25 0 40437.0 + 811 AESVRDPTR 9 93 515.7670679954742 1029.5195830577484 2 515.7667724490166 MULTI CID FTMS 0 0 0 5585 93377.421875 0.3054719255273037 -14 0.2921905517578125 2 Unmodified _AESVRDPTR_ REV__ENSG00000166922|ENST00000300175|SCG5;REV__nc|ENSG00000166922|P05408-2|SCG5 14.838274106304384 0.4350285940865338 3 [TA]DR{[TV]|[{I|L}S]}V 7 -1 25.383 0.0 0.0 2.4656 0.0 0.0 0.0 284.08800878488927 284.08800878488927 15.850592342364775 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.1694451763165201 0.8494850021680094 [TA]DR{[TV]|[{I|L}S]}V 2.4656 - 192 1 2.417 98905.0 0.4699999988079071 858 4727 5585 HBL1_DMSO_200M_050219_1,5587 HBL1_DMSO_200M_050219_1,5587,AESVRDPTR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5589 27.442 191.0 205300.0 25 0 27665.0 -1 0 67 438.4870182395388 1749.9189670917551 4 438.4870178103447 MULTI CID FTMS 0 0 0 5588 290867.3125 0.3128983693489726 10 -0.0912551879882812 1 3 [{I|L}V]QMRAAHK 9 -1 59.384 0.0 0.0 3.3935 0.0 0.0 0.0 712.2913912408811 712.2913912408811 43.18636235841012 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.4247425010840047 [{I|L}V]QMRAAHK 3.3935 - 113 + 1 2.417 38416.4 1.0 859 4728 5588 HBL1_DMSO_200M_050219_1,5589 HBL1_DMSO_200M_050219_1,5589, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5590 27.445 145.0 475180.0 25 0 68008.0 -1 TSACPTCSP 9 76 462.18299689644425 922.3514408596884 2 462.1832458376884 MULTI CID FTMS 0 0 0 5588 332343.84375 1.0 0 0.0 2 Carbamidomethyl (C) _TSAC(Carbamidomethyl (C))PTCSP_ ENST00000592915.1_1_17:42084528-42084666:+|nuORF 23.1484247019978 0.2366544122328345 3 {[MG]|[TS]}AES 5 -1 26.95 0.0 0.0 2.9219 0.0 0.0 0.0 444.1371248834594 444.1371248834594 11.465912507003608 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.0 {[MG]|[TS]}AES 2.9219 - 40 + 1 2.417 58274.8 1.0 860 4728 5588 HBL1_DMSO_200M_050219_1,5590 HBL1_DMSO_200M_050219_1,5590,TSACPTCSP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5591 27.459 800.0 50612.0 25 0 12419.0 -1 0 47 796.6331633725943 2386.8776607179825 3 796.9671508669853 MULTI CID FTMS 0 0 0 5588 78957.4609375 1.0 0 0.0 3 3 W 1 -1 12.474 0.0 0.0 0.52262 0.0 0.0 2182.7877692158327 0.0 2182.7877692158327 0.0 12.09564653870988 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.52262 - 4 + 1 2.417 45451.2 0.4199999868869781 861 4728 5588 HBL1_DMSO_200M_050219_1,5591 HBL1_DMSO_200M_050219_1,5591, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5594 27.475 589.0 163940.0 25 0 12879.0 -1 QSRFRRRCWRR 11 115 416.72909823856753 1662.8872870878702 4 416.7287475466728 MULTI CID FTMS 0 0 0 5593 119642.0625 0.1841774493887316 -14 0.2671146392822265 1 Carbamidomethyl (C) _QSRFRRRC(Carbamidomethyl (C))WRR_ ENSG00000249715|ENST00000624922|FER1L5 0.0948413911109767 0.8747004676205551 3 [{I|L}V]KMRAAHKKS 11 -1 83.748 0.0 0.0 5.0363 0.0 0.0 0.0 410.1323336236938 410.1323336236938 69.62346539666262 0.0 0.0 0.0 0 0.2302046884880938 2.0 0.4247425010840047 0.4247425010840047 [{I|L}V]KMRAAHKKS 5.0363 - 707 + 1 2.417 83831.7 1.0 862 4730 5593 HBL1_DMSO_200M_050219_1,5594 HBL1_DMSO_200M_050219_1,5594,QSRFRRRCWRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5599 27.503 800.0 46546.0 25 0 4546.2 -1 0 67 673.3070047360152 2016.8991848082453 3 673.6405517458916 MULTI CID FTMS 0 0 0 5598 92429.1328125 0.5144516962571295 -11 0.1354808807373047 1 3 W 1 -1 12.474 0.0 0.0 0.61849 0.0 0.0 1812.809018647892 0.0 1812.809018647892 0.0 3.521825181113625 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.61849 - 35 + 1 2.452 39386.2 0.5600000023841858 863 4734 5598 HBL1_DMSO_200M_050219_1,5599 HBL1_DMSO_200M_050219_1,5599, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5602 27.523 800.0 94885.0 25 0 7256.3 + 17985 KRRCFRNWRRW 11 88 555.3023264350554 1662.8851499053662 3 555.3041869997978 MULTI CID FTMS 0 0 0 5601 74627.84375 0.4644945114226187 -6 0.0444774627685546 1 Unmodified _KRRCFRNWRRW_ REV__ENSG00000151067|ENST00000399655|CACNA1C;REV__nc|ENSG00000151067|Q13936-10|CACNA1C;REV__nc|ENSG00000151067|Q13936-11|CACNA1C;REV__nc|ENSG00000151067|Q13936-13|CACNA1C;REV__nc|ENSG00000151067|Q13936-14|CACNA1C;REV__nc|ENSG00000151067|Q13936-15|CACNA1C;REV__nc|ENSG00000151067|Q13936-16|CACNA1C;REV__nc|ENSG00000151067|Q13936-17|CACNA1C;REV__nc|ENSG00000151067|Q13936-18|CACNA1C;REV__nc|ENSG00000151067|Q13936-19|CACNA1C;REV__nc|ENSG00000151067|Q13936-2|CACNA1C;REV__nc|ENSG00000151067|Q13936-20|CACNA1C;REV__nc|ENSG00000151067|Q13936-21|CACNA1C;REV__nc|ENSG00000151067|Q13936-22|CACNA1C;REV__nc|ENSG00000151067|Q13936-23|CACNA1C;REV__nc|ENSG00000151067|Q13936-24|CACNA1C;REV__nc|ENSG00000151067|Q13936-25|CACNA1C;REV__nc|ENSG00000151067|Q13936-26|CACNA1C;REV__nc|ENSG00000151067|Q13936-27|CACNA1C;REV__nc|ENSG00000151067|Q13936-28|CACNA1C;REV__nc|ENSG00000151067|Q13936-29|CACNA1C;REV__nc|ENSG00000151067|Q13936-3|CACNA1C;REV__nc|ENSG00000151067|Q13936-30|CACNA1C;REV__nc|ENSG00000151067|Q13936-31|CACNA1C;REV__nc|ENSG00000151067|Q13936-32|CACNA1C;REV__nc|ENSG00000151067|Q13936-33|CACNA1C;REV__nc|ENSG00000151067|Q13936-34|CACNA1C;REV__nc|ENSG00000151067|Q13936-35|CACNA1C;REV__nc|ENSG00000151067|Q13936-36|CACNA1C;REV__nc|ENSG00000151067|Q13936-37|CACNA1C;REV__nc|ENSG00000151067|Q13936-4|CACNA1C;REV__nc|ENSG00000151067|Q13936-5|CACNA1C;REV__nc|ENSG00000151067|Q13936-6|CACNA1C;REV__nc|ENSG00000151067|Q13936-7|CACNA1C;REV__nc|ENSG00000151067|Q13936-8|CACNA1C;REV__nc|ENSG00000151067|Q13936-9|CACNA1C;REV__nc|ENSG00000151067|Q13936|CACNA1C 0.0948413911109767 0.8747004676205551 3 [{I|L}V]KMRAAHKKSEEH 14 -1 + 89.544 0.0 0.0 5.3849 5.3849 84.812 0.0 0.0 0.0 65.26426485446277 0.7572071393811939 0.7572071393811939 9.050244867691449 0 0.3807196863200844 2.0 0.4247425010840047 0.0 [{I|L}V]KMRAAHKKSEEH;[{I|L}V]KM[VG]AAHKKSEEH;[{I|L}V]K{M(Oxidation (M))|F}[NP]AHKKSEEH;[{I|L}V]{M(Oxidation (M))|F}K[NP]AHKKSEEH;{[WT]|[RM]}[KA]A[QA]HAARMK{[HG]|PP};[{I|L}V]HHA[QA]HAARMK{[HG]|PP};{[WT]|[RM]}[KA]AHK[HS]E{M(Oxidation (M))|F}K{[HG]|PP};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[QV]|[N{I|L}]|[RA]|[KV]}A[QA]HAARMK{[HG]|PP};[{I|L}V]HHAHK[HS]E{M(Oxidation (M))|F}K{[HG]|PP};{[WT]|[RM]}[KA]AHK[HS]EK{M(Oxidation (M))|F}{[HG]|PP} 5.3849;4.8406;4.2573;4.0763;2.9582;2.6548;1.8317;1.7869;1.7838;1.6507 -;-;-;-;-;-;-;-;-;- 419 + 1 2.452 65504.7 0.5799999833106995 864 4736 5601 HBL1_DMSO_200M_050219_1,5602 HBL1_DMSO_200M_050219_1,5602,KRRCFRNWRRW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5605 27.543 800.0 237270.0 25 0 17891.0 -1 LMKLKHLDL 9 139 376.22810041727 1125.66247185201 3 376.2273132205009 MULTI CID FTMS 0 0 0 5604 95168.8515625 0.7877224301808541 -2 0.0201053619384765 1 Oxidation (M) _LM(Oxidation (M))KLKHLDL_ ENSG00000131951|ENST00000570145|LRRC9;nc|ENSG00000131951|Q6ZRR7-2|LRRC9;nc|ENSG00000131951|Q6ZRR7|LRRC9 11.494710602746466 0.5255349189887087 3 {I|L}PV 3 -1 33.098 0.0 0.0 2.9403 0.0 0.0 0.0 813.4320201500067 813.4320201500067 19.603390010014195 0.0 0.0 0.0 0 0.2215141619232908 0.7695510786217261 0.0 0.0 {I|L}PV 2.9403 - 102 + 1 2.452 156094.2 0.5299999713897705 865 4738 5604 HBL1_DMSO_200M_050219_1,5605 HBL1_DMSO_200M_050219_1,5605,LMKLKHLDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5608 27.556 341.0 386400.0 25 0 57160.0 32442 SAEKASNQKEL 11 140 402.2106338421406 1203.6100721266218 3 402.2101013064384 MULTI CID FTMS 0 0 0 5607 174053.109375 0.39599275656756 -7 0.064188003540039 1 Unmodified _SAEKASNQKEL_ ENSG00000151150|ENST00000280772|ANK3 10.52747425323666 0.8161629707409286 3 {[SA]|[TG]}TADK{I|L}AADNK 12 9 + 82.323 0.0 0.0 6.8396 6.8396 85.622 0.0 0.0 0.0 20.457574905606748 4.757724967479859 4.757724967479859 4.757724967479859 0 0.5941876774005248 1.3010299956639813 0.0 1.1936726795685342 {[SA]|[TG]}TADK{I|L}AADNK;{[SA]|[TG]}TADK{I|L}AADKN;{[SA]|[TG]}TADK{I|L}AADGGK;{[SA]|[TG]}TADK[KT]SA[QP];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WK{I|L}AADNK;{[SA]|[TG]}TADK[KT]SAA[PG];{[SA]|[TG]}TADK[YR][RH];{[SA]|[TG]}TWK{I|L}HH[QP];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WK{I|L}AADKN;{[SA]|[TG]}TADK{I|L}AA[NS][VG] 6.8396;6.4443;6.0837;4.5653;4.4231;4.1916;4.1056;4.0953;4.0279;4.0154 -;-;-;-;-;-;-;-;-;- 1421 + 1 2.452 105073.6 1.0 866 4740 5607 HBL1_DMSO_200M_050219_1,5608 HBL1_DMSO_200M_050219_1,5608,SAEKASNQKEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5609 27.57 800.0 42906.0 25 0 1705.2 -1 0 64 844.6310046142524 3374.4949125906096 4 845.1370727419853 MULTI CID FTMS 0 0 0 5607 90837.4375 0.735904003297241 -4 0.0403099060058593 2 3 ATQG 4 -1 27.211 0.0 0.0 0.80638 0.0 0.0 2365.0872231811613 649.2235811822874 3014.310804363449 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.4247425010840047 ATQG 0.80638 - 53 + 1 2.452 31606.3 0.4900000095367431 867 4740 5607 HBL1_DMSO_200M_050219_1,5609 HBL1_DMSO_200M_050219_1,5609, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5612 27.586 582.0 96086.0 25 0 6215.2 37105 TGTAVQLSWEL 11 101 602.8120050521976 1203.6094571711951 2 602.8113891482353 MULTI CID FTMS 0 0 0 5611 75020.734375 0.5702665841433928 -3 0.0301322937011718 1 Unmodified _TGTAVQLSWEL_ ENSG00000110046|ENST00000377264|ATG2A;nc|ENSG00000110046|Q2TAZ0-3|ATG2A 29.291429492411588 0.4044309236191126 3 {[SA]|[TG]}TADK{I|L}AADNK 12 7 + 126.89 0.0 0.0 10.542 10.542 94.311 0.0 0.0 0.0 113.70063041261372 17.241344366950685 17.241344366950685 9.098233696509126 0 2.7104093769761874 1.0969100130080565 0.0 1.7491348669726232 {[SA]|[TG]}TADK{I|L}AADNK;{[SA]|[TG]}TADK{I|L}AADGGK;{[SA]|[TG]}TWRRADNK;{[SA]|[TG]}TWRRADGGK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[EP]{I|L}AADNK;{[SA]|[TG]}EASK{I|L}AADNK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[TP]{I|L}AADNK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[EP]{I|L}AADGGK;[TA]ADSK{I|L}AADNK;{[QD]|[EN]|[WG]|[KD]|[RS]}DSK{I|L}AADNK 10.542;9.7864;7.1168;6.3554;6.34;5.9643;5.7392;5.5816;5.5779;5.4595 -;-;-;-;-;-;-;-;-;- 2405 + 1 2.467 46152.3 1.0 868 4742 5611 HBL1_DMSO_200M_050219_1,5612 HBL1_DMSO_200M_050219_1,5612,TGTAVQLSWEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5613 27.594 461.0 118970.0 25 0 7383.3 -1 0 76 459.2284432910652 1832.884667297861 4 459.4795104861259 MULTI CID FTMS 0 0 0 5611 118893.625 1.0 0 0.0 2 3 PH{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}SHE[RV]W 11 -1 16.93 0.0 0.0 0.9237 0.0 0.0 411.17943120047954 0.0 411.17943120047954 0.0 1.969586002302858 0.0 0.0 0 0.0 0.0 0.0 0.0 PH{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}SHE[RV]W 0.9237 - 123 + 1 2.467 53419.2 1.0 869 4742 5611 HBL1_DMSO_200M_050219_1,5613 HBL1_DMSO_200M_050219_1,5613, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5616 27.614 800.0 151220.0 25 0 12545.0 + 5832 DPSKPGGNV 9 138 435.7192486758212 869.4239444184424 2 435.7192870974541 MULTI CID FTMS 0 0 0 5615 117136.15625 0.7505537509896635 1 -0.0161418914794921 1 Unmodified _DPSKPGGNV_ ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1 41.95555342248728 0.0647214845423414 3 DPSK[NP]NV 8 2 + 67.375 0.0 0.0 7.7494 7.7494 94.031 0.0 0.0 0.0 53.39546143689097 6.827417515368438 6.827417515368438 11.251837901751005 0 1.4361818737241734 2.0 0.0 0.4876954943324545 DPSK[NP]NV;DPSK[NP]GGV;DPS[WP]{[VA]|[{I|L}G]}V;[DP]SK[NP]NV;[PS]DK[NP]NV;[PS]KD[NP]NV 7.7494;6.4552;5.4059;4.6059;2.2884;0.98941 -;-;-;-;-;- 239 + 1 2.467 97091.6 0.75 870 4744 5615 HBL1_DMSO_200M_050219_1,5616 HBL1_DMSO_200M_050219_1,5616,DPSKPGGNV True True DPSKPGGNV 27.614266 435.719287097454 760661.5625 5615.0 ENSG00000161011|ENST00000389805|SQSTM1;;nc|ENSG00000161011|Q13501-2|SQSTM1;;ENST00000466342.1_1_5:179250916-179260288:+|nuORF 6.31957213083903 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5618 27.619 50.0 1640700.0 25 0 441470.0 + + 36488 TADPRSREV 9 73 344.18081005806846 1029.5206007744057 3 344.1805297732353 MULTI CID FTMS 0 0 0 5617 1168501.25 0.8581473327601341 1 -0.0045680999755859 1 Unmodified _TADPRALTW_ ENSG00000132361|ENST00000651024|CLUH 14.40537977576856 0.4467465336100671 3 [TA]D 3 -1 34.844 0.0 0.0 3.3845 0.0 0.0 0.0 739.3859837940466 739.3859837940466 6.255214933504341 0.0 0.0 0.0 0 0.5 2.0 0.2396518287104437 0.0 [TA]D 3.3845 + + 88 1 2.467 69532.5 1.0 871 4745 5617 HBL1_DMSO_200M_050219_1,5618 HBL1_DMSO_200M_050219_1,5618,TADPRALTW False False TADPRSREV 27.618838 344.180529773235 16002412.0 5617.0 ENSG00000132361|ENST00000651024|CLUH 4.869418621063232 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5620 27.635 800.0 164640.0 25 0 7439.2 + 43494 WWRVCDQNA 9 122 589.2652946772681 1176.516036421336 2 589.2635375857353 MULTI CID FTMS 0 0 0 5619 192658.796875 0.5529013800200135 -5 0.0491065979003906 1 Unmodified _WWRVCDQNA_ REV__ENST00000523376.5_1_11:14926604-14927012:+|nuORF 32.30548876998284 0.1201446275138228 3 [AG]DAG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQD 11 -1 76.092 0.0 0.0 6.4675 0.0 0.0 0.0 85.04192309468763 85.04192309468763 53.09685862423216 0.0 0.0 0.0 0 1.1643943297944483 2.0 1.6479400086720375 1.1549471895720984 [AG]DAG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQD 6.4675 - 4979 1 2.467 102770.4 0.6800000071525574 872 4746 5619 HBL1_DMSO_200M_050219_1,5620 HBL1_DMSO_200M_050219_1,5620,WWRVCDQNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5621 27.649 800.0 22463.0 25 0 1203.9 -1 0 51 910.027361321811 4545.100424276055 5 910.8347656130792 MULTI CID FTMS 0 0 0 5619 80621.890625 1.0 0 0.0 2 3 H 1 -1 6.9897 0.0 0.0 0.15379 0.0 0.0 3634.693272031717 770.3399752252561 4405.0332472569735 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.15379 - 13 + 1 2.467 22570.0 0.3899999856948852 873 4746 5619 HBL1_DMSO_200M_050219_1,5621 HBL1_DMSO_200M_050219_1,5621, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5623 27.66 406.0 188710.0 25 0 29787.0 30037 QTQCCFRV 8 95 492.72351892143774 983.4324849096756 2 492.7234985232353 MULTI CID FTMS 0 0 0 5622 200879.8125 0.7490885123362996 12 -0.2172431945800781 1 Unmodified _QTQCCFRV_ chr6:106739770-106747214|10|13.3|0.58|4.51|-|0|LINC02532,LINC02532|1 19.438996006549623 0.6237395211498085 3 [QT]V 3 5 28.838 0.0 0.0 2.9324 0.0 0.0 0.0 652.2344617986005 652.2344617986005 14.233733331901508 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.2887254899964357 0.25 [QT]V 2.9324 - 219 1 2.472 64475.1 1.0 874 4747 5622 HBL1_DMSO_200M_050219_1,5623 HBL1_DMSO_200M_050219_1,5623,QTQCCFRV False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 5624 27.672 696.0 180490.0 25 0 8368.5 39878 VFLGHGGLTSV 11 176 362.86841124744166 1085.583404342525 3 362.8677856326103 MULTI CID FTMS 0 0 0 5622 159825.84375 0.0232880114401706 -22 0.2853069305419922 2 Unmodified _VFLGHGGLTSV_ ENST00000325147.13_1_11:203487-204003:-|nuORF;ENST00000433234.2_11:203487-204043:-|nuORF 29.081581746732265 0.4093582134107448 3 MSKPTV 6 9 58.761 0.0 0.0 5.4128 0.0 0.0 424.2326832501969 0.0 424.2326832501969 0.0 40.35458232427736 0.0 0.0 0 0.5 0.0 1.610924374808178 0.0 MSKPTV 5.4128 - 1758 1 2.472 110797.4 1.0 875 4747 5622 HBL1_DMSO_200M_050219_1,5624 HBL1_DMSO_200M_050219_1,5624,VFLGHGGLTSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5626 27.688 800.0 26915.0 25 0 1274.7 -1 0 41 927.160845899186 3704.614277730344 4 927.4115478396416 MULTI CID FTMS 0 0 0 5625 36699.953125 0.0993320704791712 13 -0.2423343658447265 1 3 S{[QD]|[EN]|[WG]|[KD]|[RS]} 3 -1 14.705 0.0 0.0 0.39694 0.0 0.0 3356.4859951149133 0.0 3356.4859951149133 0.0 10.725599829726422 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 S{[QD]|[EN]|[WG]|[KD]|[RS]} 0.39694 - 9 + 1 2.472 24662.5 0.3600000143051147 876 4748 5625 HBL1_DMSO_200M_050219_1,5626 HBL1_DMSO_200M_050219_1,5626, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5628 27.695 249.0 301410.0 25 0 100780.0 + 36490 TADPRSREV 9 71 515.7670679954742 1029.5195830577484 2 515.7671386599541 MULTI CID FTMS 0 0 0 5627 175060.71875 0.5726880627775551 8 -0.142679214477539 1 Unmodified _TADPRSREV_ ENSG00000132361|ENST00000651024|CLUH 10.823927491677226 0.5436922275383211 3 [TA]D 3 6 18.645 0.0 0.0 1.8111 0.0 0.0 0.0 739.384700815814 739.384700815814 8.187587626244126 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.0 + [TA]D 1.8111 + + 17 1 2.472 62167.5 1.0 877 4749 5627 HBL1_DMSO_200M_050219_1,5628 HBL1_DMSO_200M_050219_1,5628,TADPRSREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5629 27.709 800.0 211610.0 25 0 32007.0 25206 MTRGGTGVQV 10 135 503.26021211884006 1004.50587130448 2 503.2597228884697 MULTI CID FTMS 0 0 0 5627 87815.75 0.3247453126020209 -25 0.3284244537353515 2 Unmodified _MTRGGTGVQV_ ENST00000329117.9_1_1:156628937-156629213:+|nuORF 9.38312468134398 0.6832340498775793 3 [KQ][{M(Oxidation (M))|F}V][RN]DV 8 9 [KQ][{M(Oxidation (M))|F}V][RN]D + + 12.218 -7.4219 -0.83634 1.2164 1.2164 48.427 0.0 0.0 0.0 0.0 -3.3547064036788754 -3.3547064036788754 0.0 0 0.0 0.0 0.0 0.0 [KQ][{M(Oxidation (M))|F}V][RN]DV 1.2164 - 92 + 1 2.472 128604.1 0.4300000071525574 878 4749 5627 HBL1_DMSO_200M_050219_1,5629 HBL1_DMSO_200M_050219_1,5629,MTRGGTGVQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5632 27.729 800.0 148930.0 25 0 9479.1 + 22999 LSHFTLSGPSV 11 175 382.20360345724 1143.58898097192 3 382.2032043337822 MULTI CID FTMS 0 0 0 5631 70859.09375 0.6129782956162079 -4 0.0639877319335937 1 Unmodified _LSHFTLSGPSV_ REV__nc|ENSG00000170983|Q96KT6|LINC00208 21.53697664764585 0.586507868110548 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[YR]KPTV 9 -1 + 66.635 0.0 0.0 5.8268 5.8268 77.157 0.0 0.0 0.0 1.2402405611594247 16.478174818886373 1.2402405611594247 1.2402405611594247 0 0.3807196863200844 1.3979400086720375 1.5994850021680094 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[YR]KPTV;[TP]KD[SG]DKPTV;[KP]TD[SG]DKPTV;[KP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}SDKPTV;{[VA]|[{I|L}G]}[VG]D[SG]DKPTV;{[QD]|[EN]|[WG]|[KD]|[RS]}[TP][SG]DKPTV;{[ES]|[DT]|[{I|L}C]}[KP][SG]DKPTV;[VS]G[TP][SG]DKPTV;[PG]S{[TV]|[{I|L}S]}[SG]DKPTV;{[QD]|[EN]|[WG]|[KD]|[RS]}[WK][RD]PTV 5.8268;5.7184;4.8226;4.198;4.1453;4.0199;3.9582;3.8874;3.4488;1.7136 -;-;-;-;-;-;-;-;-;- 376 1 2.472 101611.8 0.5099999904632568 879 4751 5631 HBL1_DMSO_200M_050219_1,5632 HBL1_DMSO_200M_050219_1,5632,LSHFTLSGPSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5633 27.743 800.0 33407.0 25 0 2827.1 -1 0 57 673.3070047360152 2016.8991848082453 3 673.9757568240166 MULTI CID FTMS 0 0 0 5631 144760.828125 1.0 0 0.0 2 3 W 1 -1 12.474 0.0 0.0 0.61849 0.0 0.0 1812.80921701215 0.0 1812.80921701215 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.61849 - 15 + 1 2.472 35186.6 0.7300000190734863 880 4751 5631 HBL1_DMSO_200M_050219_1,5633 HBL1_DMSO_200M_050219_1,5633, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5635 27.749 201.0 231100.0 25 0 25970.0 + -1 VIKMGVAAHKKSHEE 15 70 416.72909823856753 1662.8872870878702 4 416.7288696169853 MULTI CID FTMS 0 0 0 5634 263260.21875 0.4052637893541373 8 -0.1394329071044922 1 Carbamidomethyl (C) _QSRFRRRC(Carbamidomethyl (C))WRR_ ENSG00000143546|ENST00000368733|S100A8 0.0948413911109767 0.8747004676205551 3 V{I|L}QMRAAHKK 10 -1 72.568 0.0 0.0 4.364 0.0 0.0 0.0 497.1644991510376 497.1644991510376 59.8037685459985 0.0 0.0 0.0 0 0.2302046884880938 2.0 0.0 0.0 V{I|L}QMRAAHKK 4.364 - 152 + 1 2.472 43000.5 1.0 881 4752 5634 HBL1_DMSO_200M_050219_1,5635 HBL1_DMSO_200M_050219_1,5635,QSRFRRRCWRR False False VIKMGVAAHKKSHEE 27.7491 416.728869616985 7903318.5625 5634.0 ENSG00000143546|ENST00000368733|S100A8 10.482221603393556 4.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5636 27.763 800.0 126050.0 25 0 10807.0 + 28485 PTKGRADLTQ 10 105 543.7986969640438 1085.5828409948874 2 543.7996093630791 MULTI CID FTMS 0 0 0 5634 104848.734375 0.0818149437364286 -17 0.2399406433105468 2 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 28.49450938151212 0.328477364964909 3 TPKG[YR]GTP 9 -1 82.401 0.0 0.0 7.5905 0.0 0.0 0.0 125.07222925357657 125.07222925357657 67.0395587027096 0.0 0.0 0.0 0 0.5796896906561032 1.6989700043360187 1.1989700043360187 0.0 TPKG[YR]GTP 7.5905 - 391 + 1 2.472 80338.4 0.4799999892711639 882 4752 5634 HBL1_DMSO_200M_050219_1,5636 HBL1_DMSO_200M_050219_1,5636,PTKGRADLTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5639 27.783 800.0 111470.0 25 0 7500.4 + 39951 VGAGAAWVTV 10 118 465.7538278012375 929.493102669275 2 465.7543823122978 MULTI CID FTMS 0 0 0 5638 72931.3203125 0.8215812008123923 -4 0.0578727722167968 1 Unmodified _VGAGAAWVTV_ REV__ENSG00000176619|ENST00000325327|LMNB2 21.74664581756881 0.480091245866545 3 {[TV]|[{I|L}S]}[HQ]{M(Oxidation (M))|F}VTV 8 -1 + 34.605 0.0 0.0 3.723 3.723 83.68 0.0 0.0 0.0 7.59205071718938 21.84119738914699 7.59205071718938 23.13736044535688 0 0.8252574989159953 1.2218487496163564 0.2742275032520141 0.0 {[TV]|[{I|L}S]}[HQ]{M(Oxidation (M))|F}VTV;[HA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}VTV 3.723;1.2338 -;- 132 1 2.472 74206.6 0.550000011920929 883 4754 5638 HBL1_DMSO_200M_050219_1,5639 HBL1_DMSO_200M_050219_1,5639,VGAGAAWVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5642 27.803 800.0 138490.0 25 0 14609.0 + 29278 QIEHEVSSS 9 142 508.2380962025557 1014.4616394719114 2 508.2379638552666 MULTI CID FTMS 0 0 0 5641 93622.4765625 0.3314231278956055 -4 0.0441093444824218 1 Unmodified _QIEHEVSSS_ CON__P35527;ENSG00000171403|ENST00000246662|KRT9 78.14939416004806 0.0179651292570206 3 SVE[{I|L}P]SSS 8 5 40.641 0.0 0.0 4.0061 0.0 0.0 210.08158683694893 0.0 210.08158683694893 0.0 20.82875241285757 0.0 0.0 0 0.3807196863200844 0.0 1.555462187404089 0.0 SVE[{I|L}P]SSS 4.0061 - 570 + 1 2.472 91214.7 0.6600000262260437 884 4756 5641 HBL1_DMSO_200M_050219_1,5642 HBL1_DMSO_200M_050219_1,5642,QIEHEVSSS True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 5643 27.817 800.0 251020.0 25 0 19001.0 -1 STMSTNGIPR 10 202 360.5094550201136 1078.5065356605407 3 360.5094787478447 MULTI CID FTMS 0 0 0 5641 104613.8203125 0.5715950666483969 -2 0.0201225280761718 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 7.945399516374404 0.6898843699695153 3 PR 2 -1 20.758 0.0 0.0 1.9247 0.0 0.0 807.3419853382013 0.0 807.3419853382013 0.0 7.825834421237516 0.0 0.0 0 0.0 0.0 0.0 0.4559771852360796 PR 1.9247 + + 242 + 1 2.472 159685.2 0.550000011920929 885 4756 5641 HBL1_DMSO_200M_050219_1,5643 HBL1_DMSO_200M_050219_1,5643,STMSTNGIPR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5644 27.831 800.0 177260.0 25 0 11092.0 -1 YTQTSFKIC 9 185 383.1877886931933 1146.54153667978 3 383.1871215701103 MULTI CID FTMS 0 0 0 5641 112008.2890625 0.5099615479886821 -4 0.0441093444824218 3 Carbamidomethyl (C) _YTQTSFKIC(Carbamidomethyl (C))_ ENST00000426094.5_1_16:278023-278203:-|nuORF 14.40537977576856 0.4467465336100671 3 TYQENK 6 -1 69.122 0.0 0.0 6.0288 0.0 0.0 0.0 380.1738375299438 380.1738375299438 34.879612301871795 0.0 0.0 0.0 0 0.4361818737241735 2.0 0.2887254899964357 0.8252574989159953 TYQENK 6.0288 - 2029 + 1 2.472 117553.9 0.5600000023841858 886 4756 5641 HBL1_DMSO_200M_050219_1,5644 HBL1_DMSO_200M_050219_1,5644,YTQTSFKIC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5646 27.848 800.0 12244.0 25 0 722.05 -1 0 28 1164.1802400086667 0 1164.180102527142 PEAK CID FTMS 0 0 0 5645 39706.703125 0.5837887669957735 1 -0.0313529968261718 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.488 16379.6 0.3199999928474426 887 4757 5645 HBL1_DMSO_200M_050219_1,5646 HBL1_DMSO_200M_050219_1,5646, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5647 27.862 800.0 43549.0 25 0 2009.4 -1 0 45 743.5280908836517 3712.604072085258 5 743.9295532107353 MULTI CID FTMS 0 0 0 5645 119422.8984375 1.0 0 0.0 2 3 SH 2 -1 9.464 0.0 0.0 0.25491 0.0 0.0 2745.2042440596706 740.2841280572874 3485.488372116958 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SH 0.25491 - 17 + 1 2.488 31395.7 0.5299999713897705 888 4757 5645 HBL1_DMSO_200M_050219_1,5647 HBL1_DMSO_200M_050219_1,5647, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5650 27.882 800.0 149850.0 25 0 6280.9 + 35554 STQMTITTQK 10 131 577.7897128509043 1153.5648727686084 2 577.7907592654228 MULTI CID FTMS 0 0 0 5649 168093.015625 0.2056524387488355 -10 0.1779556274414062 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 114.4966697963812 0.0011126474287728 3 STQ{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 118.03 0.0 0.0 10.232 10.232 94.58 0.0 0.0 0.0 101.4809526198753 18.2711470149615 18.2711470149615 9.164539485499262 0 1.0189301784845295 2.0 1.4896518287104437 1.1109243748081783 + + STQ{M(Oxidation (M))|F}T{I|L}TTQK;ST[AG]{M(Oxidation (M))|F}T{I|L}TTQK;STQ{M(Oxidation (M))|F}T{I|L}TT[AG]K;ST[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;STQ{M(Oxidation (M))|F}T{I|L}T[KS]AA;ST[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA;STQ[HK][WR]DP;S{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}C]|[YS]}{I|L}TTQK;[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}{I|L}Y[KG]NP;S[H{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}TQK 10.232;9.4373;9.4373;8.646;7.0109;6.2195;4.5229;3.3195;2.2233;2.1762 +;-;-;-;-;-;-;-;-;- + 1510 + 1 2.488 93408.8 0.6600000262260437 889 4759 5649 HBL1_DMSO_200M_050219_1,5650 HBL1_DMSO_200M_050219_1,5650,STQMTITTQK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5652 27.892 419.0 119100.0 25 0 7058.3 + -1 TDVYGYMKGQ 10 89 589.2652946772681 1176.516036421336 2 589.2645141482353 MULTI CID FTMS 0 0 0 5651 126708.6171875 0.3636344171133315 9 -0.2399349212646484 1 Oxidation (M) _TDVYGYM(Oxidation (M))KGQ_ REV__ENSG00000119041|ENST00000263956|GTF3C3 11.494710602746466 0.654671931888957 3 DQQAE[WQ]GQ 9 -1 42.101 0.0 0.0 3.5784 0.0 0.0 88.0625518240375 0.0 88.0625518240375 0.0 34.02880645020623 0.0 0.0 0 0.0 0.0 0.0 0.9247425010840048 DQQAE[WQ]GQ 3.5784 - 279 + 1 2.488 42103.3 1.0 890 4760 5651 HBL1_DMSO_200M_050219_1,5652 HBL1_DMSO_200M_050219_1,5652,TDVYGYMKGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5653 27.897 264.0 335610.0 25 0 52695.0 + 41357 VPKAQKETV 9 124 333.86619565951463 998.576757578744 3 333.8657714724541 MULTI CID FTMS 0 0 0 5651 278951.71875 0.4292297070673401 -3 0.0514812469482421 2 Unmodified _VPKAQKETV_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 34.93206674587334 0.1032771302489716 3 VPKAQ 5 4 42.855 0.0 0.0 4.2916 0.0 0.0 0.0 472.2408878328167 472.2408878328167 7.915673673239787 0.0 0.0 0.0 0 0.1643943297944484 0.0 0.0 0.3252574989159953 + VPKAQ 4.2916 + + 331 + 1 2.488 75559.2 1.0 891 4760 5651 HBL1_DMSO_200M_050219_1,5653 HBL1_DMSO_200M_050219_1,5653,VPKAQKETV True True VPKAQKETV 27.897076 333.865771472454 5829589.625 5651.0 nc|ENSG00000159023|P11171-5|EPB41;;nc|ENSG00000159023|P11171-2|EPB41;;ENSG00000159023|ENST00000343067|EPB41;;nc|ENSG00000159023|P11171-3|EPB41;;nc|ENSG00000159023|P11171-4|EPB41;;nc|ENSG00000159023|P11171-6|EPB41;;nc|ENSG00000159023|P11171-7|EPB41 6.6061027844746905 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5654 27.904 395.0 296090.0 25 0 23379.0 + 3929 DALKNHRTV 9 125 351.86486058037576 1052.5727523413273 3 351.8647033572197 MULTI CID FTMS 0 0 0 5651 100584.578125 0.0755832960665956 -4 0.0953235626220703 3 Unmodified _DALKNHRTV_ ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 27.22323531849824 0.1848086127304535 3 DA{I|L}KNHR{I|L}S 9 2 + 71.197 0.0 0.0 6.7641 6.7641 83.591 0.0 0.0 0.0 51.733260860759046 2.1941544539130007 2.1941544539130007 3.1606124668105906 0 0.3252574989159953 1.6989700043360187 0.3494850021680094 0.8494850021680094 DA{I|L}KNHR{I|L}S;DA{I|L}KNHRTV;DA{I|L}KGGHR{I|L}S;DA{I|L}KGGHRTV;DAV[KQ]HR{I|L}S;DAV[KQ]HRTV;W{I|L}KNV{[HG]|PP}{I|L}S;DA{I|L}[{M(Oxidation (M))|F}V]R[HV]P;DA{I|L}[RH]{[QN]|[E{I|L}]|[KN]}{I|L}S;W{I|L}KVN{[HG]|PP}{I|L}S 6.7641;6.4638;5.8893;5.589;4.0084;3.7081;3.591;3.5561;3.3062;3.305 -;+;-;-;-;-;-;-;-;- + 324 + 1 2.488 96869.5 1.0 892 4760 5651 HBL1_DMSO_200M_050219_1,5654 HBL1_DMSO_200M_050219_1,5654,DALKNHRTV False True DALKNHRTV 27.904145 351.86470335722 12206005.6875 5651.0 ENSG00000187240|ENST00000375735|DYNC2H1;;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 6.080638249715169 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5655 27.914 580.0 228090.0 25 0 18793.0 40500 VISPAGVS 8 173 365.2106492336828 728.4067455341657 2 365.2099182009697 MULTI CID FTMS 0 0 0 5651 99670.15625 0.2120818310195656 -26 0.3955593109130859 4 Unmodified _VISPAGVS_ ENSG00000253309|ENST00000681248|SERPINE3;nc|ENSG00000253309|A8MV23|SERPINE3 30.22481116460888 0.4082965392918993 3 V{I|L}SPADK 7 3 + 74.453 0.0 0.0 10.221 10.221 98.002 0.0 0.0 0.0 50.68845915685341 13.298457097288058 13.298457097288058 20.59585034104734 0 0.5866968715561641 2.0 0.5356668758921829 0.1203715150305281 V{I|L}SPADK;V{I|L}SPA[SG]V;V{I|L}SP[KG]E;V{I|L}S[VS]QP;V{I|L}S[KG]EP;V{I|L}SP{[QS]|[NT]}V;V{I|L}S[KG]PE;V{I|L}S[VS][AG]P 10.221;7.3939;6.6506;6.5346;6.3447;6.3012;5.9388;5.2536 -;-;-;-;-;-;-;- 164 + 1 2.488 107259.1 1.0 893 4760 5651 HBL1_DMSO_200M_050219_1,5655 HBL1_DMSO_200M_050219_1,5655,VISPAGVS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5657 27.919 19.0 2175700.0 25 0 140300.0 38121 TPLYFFISV 9 84 362.86841124744166 1085.583404342525 3 362.8681213259697 MULTI CID FTMS 0 0 0 5656 3033357.25 0.4419864565246486 -8 0.1512298583984375 1 Unmodified _TPLYFFISV_ ENSG00000180433|ENST00000641861|OR6K6;nc|ENSG00000180433|Q8NGW6|OR6K6 28.486842064014134 0.1687311288560894 3 [TP]KGSSGR[TP]V 11 8 + 63.227 0.0 0.0 5.8243 5.8243 88.297 0.0 0.0 0.0 10.457574905606748 21.58803550366069 10.457574905606748 10.457574905606748 0 0.8807196863200843 1.5228787452803376 1.3494850021680094 0.25 [TP]KGSSGR[TP]V;[KP]TGSSGR[TP]V;[KP]GTSSGR[TP]V;[PG]KTSSGR[TP]V;{[VA]|[{I|L}G]}[VG]GSSGR[TP]V;[KP]G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GK[EP]V;{[VA]|[{I|L}G]}RGSSGK[EP]V;[PG]K{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GK[EP]V 5.8243;4.861;4.2382;3.9452;2.959;2.2701;2.0216;1.9771 -;-;-;-;-;-;-;- 745 1 2.509 48949.2 1.0 894 4761 5656 HBL1_DMSO_200M_050219_1,5657 HBL1_DMSO_200M_050219_1,5657,TPLYFFISV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5658 27.93 613.0 308830.0 25 0 19666.0 + 38508 TSLEKGFF 8 221 310.16481494381395 0 310.1654540896416 PEAK CID FTMS 0 0 0 5656 100243.1875 0.9242321588093192 7 -0.2043399810791015 2 Unmodified _TSLEKGFF_ REV__ENSG00000170606|ENST00000304858|HSPA4 2.577480529830294 0.5910327097116076 3 G 1 -1 5.2423 0.0 0.0 0.84783 0.0 0.0 252.0963707550123 306.1655474866752 558.2619182416875 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 G 0.84783 + + 16 + 1 2.509 155177.3 1.0 895 4761 5656 HBL1_DMSO_200M_050219_1,5658 HBL1_DMSO_200M_050219_1,5658,TSLEKGFF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5659 27.944 800.0 265830.0 25 0 15240.0 -1 RTRKTPPTM 9 161 368.53778557723376 1102.5915273319013 3 368.8719970583916 MULTI CID FTMS 0 0 0 5656 90030.34375 0.4858332072784989 -2 0.0481681823730468 3 Oxidation (M) _RTRKTPPTM(Oxidation (M))_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 10.150570793230772 0.5619192000662246 3 RE{M(Oxidation (M))|F} 3 -1 33.486 0.0 0.0 3.0371 0.0 0.0 652.4051991193375 0.0 652.4051991193375 0.0 18.781446971601312 0.0 0.0 0 0.3807196863200844 0.0 0.5 0.3252574989159953 RE{M(Oxidation (M))|F} 3.0371 - 84 1 2.509 173047.2 0.9900000095367432 896 4761 5656 HBL1_DMSO_200M_050219_1,5659 HBL1_DMSO_200M_050219_1,5659,RTRKTPPTM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5661 27.96 800.0 40106.0 25 0 2424.1 -1 0 50 927.1610575731028 3704.6151244260095 4 927.4125854372978 MULTI CID FTMS 0 0 0 5660 80288.5078125 0.3167346719639214 3 -0.1232872009277343 1 3 S{[QD]|[EN]|[WG]|[KD]|[RS]} 3 -1 10.458 0.0 0.0 0.28229 0.0 0.0 3356.487452162142 0.0 3356.487452162142 0.0 5.853481135844875 0.0 0.0 0 0.0 0.0 0.0 0.0 S{[QD]|[EN]|[WG]|[KD]|[RS]} 0.28229 - 9 + 1 2.509 29804.6 0.6100000143051147 897 4762 5660 HBL1_DMSO_200M_050219_1,5661 HBL1_DMSO_200M_050219_1,5661, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5662 27.974 800.0 222370.0 25 0 36501.0 -1 LGPTRGRVTM 10 130 552.3028364739698 1102.5911200147395 2 552.3033325076103 MULTI CID FTMS 0 0 0 5660 155038.40625 0.9129660217865117 -2 0.0613384246826171 2 Oxidation (M) _LGPTRGRVTM(Oxidation (M))_ ENST00000606975.1_1_8:163470-182153:-|nuORF 26.268140514670165 0.3785003716575977 3 VT{M(Oxidation (M))|F} 3 -1 27.012 0.0 0.0 2.4499 0.0 0.0 737.4323360497991 0.0 737.4323360497991 0.0 7.353546668079996 0.0 0.0 0 0.805462187404089 0.0 0.2302046884880938 0.0 VT{M(Oxidation (M))|F} 2.4499 + + 125 + 1 2.509 138484.9 0.6100000143051147 898 4762 5660 HBL1_DMSO_200M_050219_1,5662 HBL1_DMSO_200M_050219_1,5662,LGPTRGRVTM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5663 27.985 648.0 85342.0 25 0 5785.3 -1 0 80 634.2991498151036 2533.1674933940144 4 634.5499145388603 MULTI CID FTMS 0 0 0 5660 132204.609375 0.6731641406520938 -1 0.0293750762939453 3 3 Q{I|L}TKSGH{[ES]|[DT]|[{I|L}C]} 9 -1 35.556 0.0 0.0 1.4036 0.0 0.0 1547.694258040896 0.0 1547.694258040896 0.0 23.566687589218283 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 Q{I|L}TKSGH{[ES]|[DT]|[{I|L}C]} 1.4036 - 709 + 1 2.509 47205.8 1.0 899 4762 5660 HBL1_DMSO_200M_050219_1,5663 HBL1_DMSO_200M_050219_1,5663, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5665 27.998 539.0 144160.0 25 0 14649.0 + 41359 VPKAQKETV 9 106 500.2952757414441 998.5759985496882 2 500.2945434451103 MULTI CID FTMS 0 0 0 5664 114665.15625 0.9205988696631476 -1 0.0412521362304687 1 Unmodified _VPKAQKETV_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 51.41523569358685 0.0372669606867193 3 [VP]KAQKETV 9 0 + 54.267 0.0 0.0 5.4344 5.4344 88.419 0.0 0.0 0.0 3.0243280270601502 22.96738668182151 3.0243280270601502 17.218487496163554 0 1.873712505420024 1.6989700043360187 0.0 0.0 + + [VP]KAQKETV;[KP]VAQKETV;[KP]AQKVETV;[KP]AQKEVTV;[KP]AQKETVV;[KP]AVQKETV;[QA]KPKVETV;[KP]A[AG]KVETV;[QA]KPKEVTV;[KP]A[AG]KEVTV 5.4344;3.7101;3.6622;3.5371;3.3322;2.9079;2.8159;2.7401;2.6908;2.6149 +;-;-;-;-;-;-;-;-;- + 889 1 2.514 65118.6 1.0 900 4763 5664 HBL1_DMSO_200M_050219_1,5665 HBL1_DMSO_200M_050219_1,5665,VPKAQKETV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5666 28.006 463.0 237510.0 25 0 85019.0 + 37064 TGGSAFGS 8 62 683.2995133964856 682.2922369298856 1 683.2994872927666 MULTI CID FTMS 0 0 0 5664 226079.515625 0.3613776643852401 -10 0.2218570709228515 2 Unmodified _TGGSAFGS_ REV__LTR16C_dup6513|chr22:37233613-37233913:-|1.2942004510666272|0.1030916453686831|3.65|48.0|9|3|sense 2.577480529830294 0.808687252328423 3 E[PA]TEH 6 -1 + 37.114 0.0 0.0 5.4396 5.4396 83.181 0.0 0.0 0.0 14.438200260161125 12.307131330965715 12.307131330965715 6.651603310239906 0 0.0 0.0 1.25 0.0 E[PA]TEH;{[YC]|[HE]}T[PA]E;[HT]E[PA]E;E[VS][WY];E[VS][DP]H 5.4396;4.4648;2.1578;1.2411;1.009 -;-;-;-;- 53 + 1 2.514 85391.3 1.0 901 4763 5664 HBL1_DMSO_200M_050219_1,5666 HBL1_DMSO_200M_050219_1,5666,TGGSAFGS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5667 28.015 521.0 235220.0 25 0 20138.0 -1 KQKNMNGLG 9 116 503.26021211884006 1004.50587130448 2 503.2602416872978 MULTI CID FTMS 0 0 0 5664 168775.078125 0.6241353687138539 -11 0.2420234680175781 3 Oxidation (M) _KQKNM(Oxidation (M))NGLG_ ENSG00000175267|ENST00000389398|VWA3A 11.640296217721598 0.521594087909532 3 AV 2 -1 14.055 0.0 0.0 1.3992 0.0 0.0 816.3892006275255 0.0 816.3892006275255 0.0 1.580306233405297 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 AV 1.3992 - 221 + 1 2.514 95057.1 1.0 902 4763 5664 HBL1_DMSO_200M_050219_1,5667 HBL1_DMSO_200M_050219_1,5667,KQKNMNGLG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5668 28.024 510.0 203400.0 25 0 20233.0 + + 32925 ESVGKGAVHDVK 12 120 409.2224591202765 1224.6455479610297 3 409.2224914431572 MULTI CID FTMS 0 0 0 5664 128608.546875 1.0 0 0.0 4 Unmodified _SEKTYRSQVK_ ENSG00000161634|ENST00000293371|DCD 12.872603262515298 0.6315522313594999 3 VAMYVK 6 -1 32.986 0.0 0.0 2.6935 0.0 0.0 515.270168353247 0.0 515.270168353247 0.0 16.286735516907868 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 VAMYVK 2.6935 - 734 + 1 2.514 89424.5 1.0 903 4763 5664 HBL1_DMSO_200M_050219_1,5668 HBL1_DMSO_200M_050219_1,5668,SEKTYRSQVK False False ESVGKGAVHDVK 28.024472 409.222491443157 505656.875 5664.0 ENSG00000161634|ENST00000293371|DCD 6.818912506103516 3.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5670 28.029 55.0 1213900.0 25 0 124960.0 + 28486 PTKGRADLTQ 10 66 543.7986969640438 1085.5828409948874 2 543.7988159060478 MULTI CID FTMS 0 0 0 5669 1230874.0 0.9604683132984442 -5 0.1582355499267578 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 28.49450938151212 0.328477364964909 3 TPKV[YN]GTP 9 -1 75.455 0.0 0.0 6.9507 0.0 0.0 0.0 125.07225977115468 125.07225977115468 68.46578144253336 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.805462187404089 0.0 TPKV[YN]GTP 6.9507 - 301 + 1 2.514 57895.4 1.0 904 4764 5669 HBL1_DMSO_200M_050219_1,5670 HBL1_DMSO_200M_050219_1,5670,PTKGRADLTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5671 28.043 800.0 70669.0 25 0 9194.1 + -1 ISGGGSRGGGGGGY 14 92 569.7657512773098 1137.5169496214196 2 569.7655517458916 MULTI CID FTMS 0 0 0 5669 87861.015625 0.8266659551268283 1 -0.0425949096679687 2 Oxidation (M) _LSLFYWM(Oxidation (M))Y_ P04264;ENSG00000167768|ENST00000252244|KRT1 34.18733598223924 0.3315367612694167 3 {I|L}S[HT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WGY 9 -1 + 71.533 0.0 0.0 6.2885 6.2885 92.149 0.0 0.0 0.0 24.901727763731856 11.9800716418942 11.9800716418942 27.614393726401687 0 1.1861818737241734 2.0 0.3807196863200844 0.0 {I|L}S[HT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WGY;{I|L}[HM]G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WGY;{I|L}[HT]S{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WGY;[HT]{I|L}S{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WGY;{[CT]|[{M(Oxidation (M))|F}G]}[YG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GS{I|L}Y;{[CT]|[{M(Oxidation (M))|F}G]}[YG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L}GY;{[CT]|[{M(Oxidation (M))|F}G]}[YG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GSY{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[YG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SG{I|L}Y;{[CT]|[{M(Oxidation (M))|F}G]}[YG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SGY{I|L} 6.2885;3.8609;3.7761;2.6873;1.2398;1.1937;1.085;0.82034;0.66554 -;-;-;-;-;-;-;-;- 132 + 1 2.514 46562.5 0.4900000095367431 905 4764 5669 HBL1_DMSO_200M_050219_1,5671 HBL1_DMSO_200M_050219_1,5671,LSLFYWMY False False ISGGGSRGGGGGGY 28.042811 569.765551745892 502253.125 5669.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 3.3979429801305137 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5672 28.057 800.0 163600.0 25 0 16057.0 + 3931 DALKNHRTV 9 124 527.2935737021622 1052.5725944711244 2 527.2933837771416 MULTI CID FTMS 0 0 0 5669 146672.046875 1.0 0 0.0 3 Unmodified _DALKNHRTV_ ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 47.7319792270244 0.0453426645642791 3 DA{I|L}KNH 6 3 77.267 0.0 0.0 7.3407 0.0 0.0 0.0 371.2043551080688 371.2043551080688 62.57380595670874 0.0 0.0 0.0 0 1.2396518287104437 1.5228787452803376 0.0 0.8494850021680094 + DA{I|L}KNH 7.3407 + + 189 + 1 2.514 105548.0 0.5799999833106995 906 4764 5669 HBL1_DMSO_200M_050219_1,5672 HBL1_DMSO_200M_050219_1,5672,DALKNHRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5673 28.067 595.0 148330.0 25 0 20099.0 + 4251 DAPQTRQV 8 92 457.7378592471757 913.4611655611516 2 457.7377502322197 MULTI CID FTMS 0 0 0 5669 135400.390625 1.0 0 0.0 4 Unmodified _DAPQTRQV_ ENST00000334554.11_1_22:20119331-20127004:+|nuORF 25.399314129420983 0.5099049743284904 3 {[DA]|[EG]}PQT 5 3 52.263 0.0 0.0 5.7214 0.0 0.0 0.0 398.2156160943969 398.2156160943969 34.35795955899096 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.7742275032520141 + {[DA]|[EG]}PQT 5.7214 + + 123 + 1 2.514 73560.1 1.0 907 4764 5669 HBL1_DMSO_200M_050219_1,5673 HBL1_DMSO_200M_050219_1,5673,DAPQTRQV False True DAPQTRQV 28.067046 457.73775023222 813978.875 5669.0 ENST00000334554.11_1_22:20119331-20127004:+|nuORF 3.4778499081730843 2.0 True 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5677 28.091 800.0 91824.0 25 0 5169.1 + 3475 CGHNRPQSES 10 102 557.735976665647 1113.4574003980938 2 557.7358276247978 MULTI CID FTMS 0 0 0 5676 129387.0546875 0.5357852433775059 -4 0.0898342132568359 1 Unmodified _CGHNRPQSES_ REV__ENST00000469937.2_1_7:46729000-46799342:-|nuORF 27.628801355627647 0.3479284626772844 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQE[{I|L}T]SES 10 -1 + 63.744 0.0 0.0 5.7249 5.7249 79.254 0.0 0.0 0.0 42.77537005343681 18.928643424857874 18.928643424857874 2.7815125038364386 0 0.0 0.0 1.8338395061109685 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQE[{I|L}T]SES;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DQT[{I|L}T]SES;{[{M(Oxidation (M))|F}D]|MM}SQT[{I|L}T]SES;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[AG]E[{I|L}T]SES;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQ{M(Oxidation (M))|F}[VP]SES;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[AG]T[{I|L}T]SES;{[ES]|[DT]|[{I|L}C]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T[{I|L}T]SES;[HD]YY[{I|L}T]SES;{[{M(Oxidation (M))|F}D]|MM}S[AG]T[{I|L}T]SES;{[ES]|[DT]|[{I|L}C]}[YR]EQSES 5.7249;5.4751;5.1372;4.9018;4.7066;4.652;4.4875;4.3764;4.3141;4.243 -;-;-;-;-;-;-;-;-;- 579 + 1 2.514 61441.6 0.6700000166893005 908 4767 5676 HBL1_DMSO_200M_050219_1,5677 HBL1_DMSO_200M_050219_1,5677,CGHNRPQSES False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5678 28.105 800.0 63113.0 25 0 3439.8 + -1 ARLCHTISTN 10 96 586.7933003901501 1171.5720478471 2 586.7922241091728 MULTI CID FTMS 0 0 0 5676 82118.9140625 0.9454801091304508 -2 0.0077991485595703 2 Carbamidomethyl (C) _ARLC(Carbamidomethyl (C))HTISTN_ REV__ENST00000523223.1_1_5:170679154-170679559:+|nuORF 41.95555342248728 0.1369168616057562 3 {[MG]|[TS]}N[RK]HQSTN 10 -1 + 72.863 0.0 0.0 6.2193 6.2193 83.632 0.0 0.0 0.0 4.648167490521175 9.164539485499262 4.648167490521175 4.648167490521175 0 1.274227503252014 0.0 2.138210492164445 0.7134679910804405 {[MG]|[TS]}N[RK]HQSTN;{[QS]|[NT]}S[RK]HQSTN;{[MG]|[TS]}N[RK]H[AG]STN;{[MG]|[TS]}GG[RK]HQSTN;{[QS]|[NT]}S[RK]H[AG]STN;{[MG]|[TS]}N[RK]H[C(Carbamidomethyl (C))R]N;{[QS]|[NT]}S[RK]H[C(Carbamidomethyl (C))R]N 6.2193;5.8225;5.437;5.1906;5.0403;3.125;2.7282 -;-;-;-;-;-;- 180 1 2.514 45255.2 0.6399999856948853 909 4767 5676 HBL1_DMSO_200M_050219_1,5678 HBL1_DMSO_200M_050219_1,5678,ARLCHTISTN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5679 28.119 800.0 68753.0 25 0 10932.0 -1 0 53 931.3942452226912 1860.773937512182 2 931.3948242068292 MULTI CID FTMS 0 0 0 5676 77999.609375 1.0 0 0.0 3 3 AN[DV]E[PG] 7 -1 21.541 0.0 0.0 1.1576 0.0 0.0 1160.4874517717508 0.0 1160.4874517717508 0.0 6.592116249424507 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 AN[DV]E[PG] 1.1576 - 99 + 1 2.514 45124.9 0.5699999928474426 910 4767 5676 HBL1_DMSO_200M_050219_1,5679 HBL1_DMSO_200M_050219_1,5679, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5682 28.127 71.0 505840.0 25 0 31869.0 + 35555 STQMTITTQK 10 67 577.7897128509043 1153.5648727686084 2 577.7897827029228 MULTI CID FTMS 0 0 0 5681 817364.5625 1.0 0 0.0 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 61.08992128646608 0.0337271188422265 3 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 72.957 0.0 0.0 6.3245 6.3245 85.53 0.0 0.0 0.0 5.764837301042718 6.134332310681359 5.764837301042718 6.134332310681359 0 0.6549471895720984 0.0 0.5 0.9291746928241124 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTKQ;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTKQ;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}Q{M(Oxidation (M))|F}[KP][HV]NP;{[MG]|[TS]}Q{M(Oxidation (M))|F}[KP][YR]Q 6.3245;5.7927;5.53;5.53;4.9982;4.7387;3.6901;2.8987;1.8292;1.761 +;-;-;-;-;-;-;-;-;- + 232 + 1 2.514 34003.3 1.0 911 4769 5681 HBL1_DMSO_200M_050219_1,5682 HBL1_DMSO_200M_050219_1,5682,STQMTITTQK True False STQMTITTQK 28.126881 577.789782702923 13327427.0 5681.0 ENSG00000181143|ENST00000397910|MUC16 11.68176778157552 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5683 28.137 560.0 90227.0 25 0 8231.2 + 8200 EPSPSLIQSAN 11 88 571.7879484973578 1141.5613440615157 2 571.7877075076103 MULTI CID FTMS 0 0 0 5681 124341.71875 0.4516441694100799 -6 0.1373443603515625 2 Unmodified _EPSPSLIQSAN_ REV__ENSG00000156509|ENST00000428847|FBXO43;REV__ENST00000520987.1_1_8:101149771-101157363:-|nuORF 26.020703789607367 0.4812285719068541 3 QSAN 4 -1 46.186 0.0 0.0 4.0458 0.0 0.0 723.3811654444663 0.0 723.3811654444663 0.0 29.195925227640984 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 QSAN 4.0458 + + 83 1 2.514 43596.8 1.0 912 4769 5681 HBL1_DMSO_200M_050219_1,5683 HBL1_DMSO_200M_050219_1,5683,EPSPSLIQSAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5684 28.151 800.0 37177.0 25 0 3189.9 -1 0 53 498.7797467776982 1991.089881244393 4 498.7796508669853 MULTI CID FTMS 0 0 0 5681 88706.859375 1.0 0 0.0 3 3 {M(Oxidation (M))|F}E 2 -1 19.464 0.0 0.0 0.97755 0.0 0.0 1697.0033161582585 0.0 1697.0033161582585 0.0 4.859856381998782 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}E 0.97755 - 29 + 1 2.514 34814.3 0.5799999833106995 913 4769 5681 HBL1_DMSO_200M_050219_1,5684 HBL1_DMSO_200M_050219_1,5684, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5686 28.157 161.0 353400.0 25 0 22750.0 + 3930 DALKNHRTV 9 78 351.86486058037576 1052.5727523413273 3 351.8646423220634 MULTI CID FTMS 0 0 0 5685 288171.3125 0.2165435103134698 6 -0.1463184356689453 1 Unmodified _DALKNHRTV_ ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 31.26834338654808 0.1333407332142048 3 {[DA]|[EG]}{I|L}KNH 6 3 61.471 0.0 0.0 5.8401 0.0 0.0 0.0 371.2036837213501 371.2036837213501 45.27310937020445 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 1.274227503252014 + {[DA]|[EG]}{I|L}KNH 5.8401 + + 39 + 1 2.519 50999.2 1.0 914 4770 5685 HBL1_DMSO_200M_050219_1,5686 HBL1_DMSO_200M_050219_1,5686,DALKNHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5687 28.171 800.0 188960.0 25 0 21918.0 + 41358 VPKAQKETV 9 186 333.86619565951463 998.576757578744 3 333.8658019900322 MULTI CID FTMS 0 0 0 5685 75070.2109375 0.1155123359503823 7 -0.1502304077148437 2 Unmodified _VPKAQKETV_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 16.149105407346934 0.3995459350917656 3 VPK 3 6 34.677 0.0 0.0 3.4726 0.0 0.0 0.0 671.3357796600635 671.3357796600635 22.785722018255097 0.0 0.0 0.0 0 0.4231259905216967 0.0 0.0 0.4247425010840047 + VPK 3.4726 + + 132 + 1 2.519 123962.8 0.8700000047683716 915 4770 5685 HBL1_DMSO_200M_050219_1,5687 HBL1_DMSO_200M_050219_1,5687,VPKAQKETV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5689 28.176 10.0 3960100.0 25 0 191180.0 38122 TPLYFFISV 9 86 362.86841124744166 1085.583404342525 3 362.8681823611259 MULTI CID FTMS 0 0 0 5688 5586518.0 0.8140041187470307 2 -0.0491771697998046 1 Unmodified _TPLYFFISV_ ENSG00000180433|ENST00000641861|OR6K6;nc|ENSG00000180433|Q8NGW6|OR6K6 21.74664581756881 0.2544899275067181 3 PT[DN]SKPTV 9 8 58.822 0.0 0.0 5.4185 0.0 0.0 128.0951863019547 0.0 128.0951863019547 0.0 51.832750158095 0.0 0.0 0 1.0 0.0 1.3494850021680094 0.0 PT[DN]SKPTV 5.4185 - 689 1 2.519 45162.8 1.0 916 4771 5688 HBL1_DMSO_200M_050219_1,5689 HBL1_DMSO_200M_050219_1,5689,TPLYFFISV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5690 28.181 295.0 286530.0 25 0 32188.0 40501 VISPAGVS 8 105 365.2106492336828 728.4067455341657 2 365.2103454470634 MULTI CID FTMS 0 0 0 5688 233768.546875 0.4974213277209863 -15 0.3840408325195312 2 Unmodified _VISPAGVS_ ENSG00000253309|ENST00000681248|SERPINE3;nc|ENSG00000253309|A8MV23|SERPINE3 30.22481116460888 0.4082965392918993 3 V{I|L}SPADK 7 3 + 69.39 0.0 0.0 9.5262 9.5262 97.616 0.0 0.0 0.0 49.80306805349316 13.287589181201938 13.287589181201938 19.52098667690805 0 0.4247425010840047 2.0 0.3807196863200844 0.1861818737241735 V{I|L}SPADK;V{I|L}SP[NS]{I|L};V{I|L}[DN]GV{I|L} 9.5262;6.8463;4.7405 -;-;- 115 + 1 2.519 72437.2 1.0 917 4771 5688 HBL1_DMSO_200M_050219_1,5690 HBL1_DMSO_200M_050219_1,5690,VISPAGVS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5691 28.189 431.0 287710.0 25 0 29570.0 -1 0 182 304.67283867492216 607.3311244166443 2 304.6734802126884 MULTI CID FTMS 0 0 0 5688 152302.046875 1.0 0 0.0 3 3 Y 1 -1 13.979 0.0 0.0 2.3018 0.0 0.0 426.25696472601777 0.0 426.25696472601777 0.0 -1.861238032105458 -1.861238032105458 0.0 0 0.0 0.0 0.0 0.0 Y 2.3018 - 123 + 1 2.519 101810.2 1.0 918 4771 5688 HBL1_DMSO_200M_050219_1,5691 HBL1_DMSO_200M_050219_1,5691, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5692 28.203 800.0 131820.0 25 0 5176.3 + -1 NEQSMRRQM 9 132 598.2704836706008 1194.5264144080015 2 598.2707397341728 MULTI CID FTMS 0 0 0 5688 105689.703125 0.2439247628238138 -4 0.096292495727539 4 Oxidation (M) _NEQSM(Oxidation (M))RRQM_ REV__ENSG00000143669|ENST00000389793|LYST 36.12702656103203 0.0967173616627612 3 {[QD]|[EN]|[WG]|[KD]|[RS]}HEAQ 6 -1 45.957 0.0 0.0 3.8473 0.0 0.0 0.0 483.220892251476 483.220892251476 2.732979139548654 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.5501648626366045 1.9119543704721595 {[QD]|[EN]|[WG]|[KD]|[RS]}HEAQ 3.8473 - 1725 1 2.519 80566.0 0.5099999904632568 919 4771 5688 HBL1_DMSO_200M_050219_1,5692 HBL1_DMSO_200M_050219_1,5692,NEQSMRRQM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5693 28.216 800.0 31259.0 25 0 3443.0 -1 0 58 632.8896426891866 3159.411831112933 5 633.0917846560478 MULTI CID FTMS 0 0 0 5688 58061.37109375 0.6914174006684514 2 -0.0491771697998046 5 3 S 1 -1 6.9897 0.0 0.0 0.22123 0.0 0.0 2254.0929357045334 815.2649630182249 3069.3578987227584 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.22123 - 4 + 1 2.519 25738.4 0.4000000059604645 920 4771 5688 HBL1_DMSO_200M_050219_1,5693 HBL1_DMSO_200M_050219_1,5693, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5696 28.236 800.0 166500.0 25 0 11044.0 11096 GEELKGHGAAP 11 135 533.2694300940655 1064.5243072549308 2 533.2697631716728 MULTI CID FTMS 0 0 0 5695 144886.796875 0.8290500630543519 -3 0.0697689056396484 1 Unmodified _GEELKGHGAAP_ ENSG00000108509|ENST00000348066|CAMTA2;ENST00000574951.5_1_17:4872053-4885503:-|nuORF;nc|ENSG00000108509|O94983-2|CAMTA2;nc|ENSG00000108509|O94983-3|CAMTA2;nc|ENSG00000108509|O94983-4|CAMTA2;nc|ENSG00000108509|O94983-6|CAMTA2 32.78568957990786 0.3235288296534633 3 [VS]QK{M(Oxidation (M))|F}{[CP]|[EA]}EK 9 9 + 69.389 0.0 0.0 6.5183 6.5183 79.769 0.0 0.0 0.0 12.72105818254797 12.72105818254797 12.72105818254797 1.4612803567823818 0 1.5994850021680094 2.0 1.4559771852360797 0.7742275032520141 [VS]QK{M(Oxidation (M))|F}{[CP]|[EA]}EK;[VS]QK{[ES]|[DT]|[{I|L}C]}MEK;[VS]Q{[CP]|[EA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS][AG]K{M(Oxidation (M))|F}{[CP]|[EA]}EK;[VS][AG]K{[ES]|[DT]|[{I|L}C]}MEK;[VS]AGHV{[CP]|[EA]}Q[PA];[VS]AG{[CP]|[EA]}VHQ[PA];[VS]QHV{[CP]|[EA]}Q[PA];[VS]AGH[NG]KQ[PA];[VS]Q{[CP]|[EA]}VHQ[PA] 6.5183;6.3811;5.9336;5.6533;5.5161;5.3233;5.2047;5.1166;5.0861;4.998 -;-;-;-;-;-;-;-;-;- 1409 + 1 2.519 103286.5 0.7900000214576721 921 4773 5695 HBL1_DMSO_200M_050219_1,5696 HBL1_DMSO_200M_050219_1,5696,GEELKGHGAAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5697 28.245 488.0 118820.0 25 0 11828.0 -1 0 59 565.4996639039833 2257.969549749533 4 565.7505370974541 MULTI CID FTMS 0 0 0 5695 154622.625 1.0 0 0.0 2 3 VP{[NV]|[RG]}SQG 7 -1 30.974 0.0 0.0 1.3718 0.0 0.0 924.3419385208208 649.2188204400999 1573.5607589609206 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 VP{[NV]|[RG]}SQG 1.3718 - 81 + 1 2.519 52264.8 1.0 922 4773 5695 HBL1_DMSO_200M_050219_1,5697 HBL1_DMSO_200M_050219_1,5697, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5698 28.259 800.0 131060.0 25 0 22448.0 -1 TGERPSTAL 9 136 487.251122473899 972.487692014598 2 487.2514526247978 MULTI CID FTMS 0 0 0 5695 99342.59375 0.9750766704746936 -2 0.0491771697998046 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))TGERPSTAL_ ENSG00000204386|ENST00000375631|NEU1;ENST00000480384.1_1_6:31828203-31830565:-|nuORF;ENST00000495807.1_1_6:31829758-31830565:-|nuORF 18.13498045792455 0.3457906370836843 3 {I|L} 1 -1 14.604 0.0 0.0 1.5017 0.0 0.0 841.3928414060027 0.0 841.3928414060027 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5017 + + 337 + 1 2.519 82823.5 0.6299999952316284 923 4773 5695 HBL1_DMSO_200M_050219_1,5698 HBL1_DMSO_200M_050219_1,5698,TGERPSTAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5700 28.266 233.0 328580.0 25 0 28172.0 -1 MQARKDAAV 9 100 503.26021211884006 1004.50587130448 2 503.2596618533134 MULTI CID FTMS 0 0 0 5699 270414.21875 1.0 0 0.0 1 Oxidation (M) _M(Oxidation (M))QARKDAAV_ ENST00000401088.8_1_1:16721635-16721806:+|nuORF 18.1463463914782 0.3454829746528889 3 AV 2 -1 22.563 0.0 0.0 2.2462 0.0 0.0 816.3856678693375 0.0 816.3856678693375 0.0 13.077008980673206 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 AV 2.2462 + + 111 1 2.519 62072.4 1.0 924 4774 5699 HBL1_DMSO_200M_050219_1,5700 HBL1_DMSO_200M_050219_1,5700,MQARKDAAV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5701 28.273 399.0 246110.0 25 0 26044.0 -1 0 136 331.66598033497434 0 331.6659728884697 PEAK CID FTMS 0 0 0 5699 75517.234375 0.7219224026881887 1 -0.0322113037109375 2 3 E 1 -1 14.049 0.0 0.0 2.1245 0.0 0.0 97.0513175316217 432.200304531616 529.2516220632377 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.3807196863200844 0.0 E 2.1245 - 24 + 1 2.519 79934.5 1.0 925 4774 5699 HBL1_DMSO_200M_050219_1,5701 HBL1_DMSO_200M_050219_1,5701, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5702 28.277 243.0 308380.0 25 0 19438.0 + 3266 AYHEAGHAV 9 107 318.81908314046046 953.4354200215814 3 318.8188659548759 MULTI CID FTMS 0 0 0 5699 172803.359375 0.8930826604643937 -1 0.0385913848876953 3 Unmodified _AYHEAGHAV_ ENSG00000141385|ENST00000269143|AFG3L2;ENST00000588893.1_1_18:12344091-12348281:-|nuORF 27.628801355627647 0.1796483985696185 3 AYHE[HQ]AV 8 2 + 40.36 0.0 0.0 4.2331 4.2331 84.458 0.0 0.0 0.0 16.080335170736802 0.150312510170778 0.150312510170778 17.329722536819805 0 0.0 1.0969100130080565 0.3807196863200844 0.0 AYHE[HQ]AV;{[WN]|[YH]}EQH[Q{I|L}];{[WT]|[RM]}[SG]G{M(Oxidation (M))|F}[NS]V;{[WT]|[RM]}[NS]{M(Oxidation (M))|F}[NS]V;{[WN]|[YH]}E[AG]H[Q{I|L}];{[HG]|PP}{[CP]|[EA]}HY[Q{I|L}];{[WT]|[RM]}[SG]G{M(Oxidation (M))|F}[KG]D;{[WT]|[RM]}[NS]{M(Oxidation (M))|F}[KG]D;[HA]{[DA]|[EG]}HY[Q{I|L}];{[HG]|PP}{[CP]|[EA]}YH[Q{I|L}] 4.2331;2.4155;1.5553;1.5073;1.4368;1.2719;1.0068;0.95885;0.88593;0.64041 -;-;-;-;-;-;-;-;-;- 206 + 1 2.519 62747.3 1.0 926 4774 5699 HBL1_DMSO_200M_050219_1,5702 HBL1_DMSO_200M_050219_1,5702,AYHEAGHAV False True AYHEAGHAV 28.277203 318.818865954876 774574.4375 5699.0 ENST00000588893.1_1_18:12344091-12348281:-|nuORF;;ENSG00000141385|ENST00000269143|AFG3L2 2.176329692204793 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5703 28.291 800.0 83728.0 25 0 6135.1 -1 0 76 827.1186847864069 3304.4456332792274 4 827.3709594607353 MULTI CID FTMS 0 0 0 5699 119259.203125 0.7313208041071916 -3 0.0877685546875 4 3 {I|L}ATQG 5 -1 22.779 0.0 0.0 0.68936 0.0 0.0 2181.97500447239 649.2201632135374 2831.195167685928 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 {I|L}ATQG 0.68936 - 217 + 1 2.519 51274.5 0.5199999809265137 927 4774 5699 HBL1_DMSO_200M_050219_1,5703 HBL1_DMSO_200M_050219_1,5703, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5705 28.297 174.0 383910.0 25 0 41962.0 + 28487 PTKGRADLTQ 10 71 543.7986969640438 1085.5828409948874 2 543.7988769412041 MULTI CID FTMS 0 0 0 5704 387675.40625 0.3025085780902242 6 -0.1314144134521484 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 28.49450938151212 0.328477364964909 3 TPKV[YN]GTP 9 -1 81.961 0.0 0.0 7.5499 0.0 0.0 0.0 125.07222925357657 125.07222925357657 71.3646994256174 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.805462187404089 0.3494850021680094 TPKV[YN]GTP 7.5499 - 345 + 1 2.519 54709.9 1.0 928 4775 5704 HBL1_DMSO_200M_050219_1,5705 HBL1_DMSO_200M_050219_1,5705,PTKGRADLTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5708 28.317 800.0 89169.0 25 0 3550.6 -1 0 72 1102.1536839330436 3303.439222399331 3 1102.822558581829 MULTI CID FTMS 0 0 0 5707 93466.8515625 0.6784031164081511 1 -0.0440044403076171 1 3 AT 2 -1 19.464 0.0 0.0 0.5892 0.0 0.0 2294.030268845426 834.3003634088499 3128.330632254276 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 AT 0.5892 - 31 + 1 2.519 52029.9 0.5699999928474426 929 4777 5707 HBL1_DMSO_200M_050219_1,5708 HBL1_DMSO_200M_050219_1,5708, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5709 28.331 800.0 197880.0 25 0 15568.0 + 13858 HVIEKMHHV 9 180 377.2025757172478 1128.585897751943 3 377.2023193240166 MULTI CID FTMS 0 0 0 5707 94100.6875 0.3234452945133071 -6 0.129638671875 2 Unmodified _HVIEKMHHV_ ENSG00000115267|ENST00000649979|IFIH1 65.23502041540118 0.0231836506122253 3 [HV]{I|L}EKMHHV 9 0 + 60.913 0.0 0.0 5.3973 5.3973 88.548 0.0 0.0 0.0 20.12645193906268 37.69081934674109 20.12645193906268 19.436974992327123 0 2.128144697160131 2.0 0.0 0.0 + + [HV]{I|L}EKMHHV;[HV]{I|L}T{[MG]|[TS]}HVHV;[HV]{I|L}T[VG]MHHV;[HV]{I|L}T{[MG]|[TS]}VHHV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}MRPVHV;{[QN]|[E{I|L}]|[KN]}[HV]KMHHV;HHMKE{I|L}VHV;HHMKEV{I|L}HV;{[QN]|[E{I|L}]|[KN]}[YQ]E{I|L}VHV;[HM]HKE{I|L}VHV 5.3973;3.675;3.6715;3.6513;2.752;2.6312;2.509;1.8896;1.4581;1.3858 +;-;-;-;-;-;-;-;-;- + 801 1 2.519 128866.7 0.550000011920929 930 4777 5707 HBL1_DMSO_200M_050219_1,5709 HBL1_DMSO_200M_050219_1,5709,HVIEKMHHV True True HVIEKMHHV 28.330749 377.202319324017 1366007.75 5707.0 ENSG00000115267|ENST00000649979|IFIH1 7.293907483418782 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5710 28.345 800.0 88139.0 25 0 4113.0 8356 ESATPAALAY 10 116 497.249765722548 992.484978511896 2 497.2498962283134 MULTI CID FTMS 0 0 0 5707 83385.453125 1.0 0 0.0 3 Unmodified _ESATPAALAY_ ENSG00000128059|ENST00000264220|PPAT;ENST00000425339.2_1_4:57266934-57267072:-|nuORF 11.640296217721598 0.652229146672156 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG]P{I|L}T{M(Oxidation (M))|F}K 9 8 + 16.815 0.0 0.0 1.6942 1.6942 72.109 0.0 0.0 0.0 1.2414975337711418 2.835291346893204 1.2414975337711418 4.259687322722815 0 0.0 0.0 0.0 0.1462566630072955 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG]P{I|L}T{M(Oxidation (M))|F}K;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[RH]T{M(Oxidation (M))|F}K 1.6942;1.265 -;- 116 + 1 2.519 59916.2 0.5699999928474426 931 4777 5707 HBL1_DMSO_200M_050219_1,5710 HBL1_DMSO_200M_050219_1,5710,ESATPAALAY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5713 28.365 800.0 137940.0 25 0 10747.0 + 34752 SQAGPSNGV 9 163 408.6957307866567 815.3769086401135 2 408.6952697634697 MULTI CID FTMS 0 0 0 5712 119655.2734375 0.6217153264226949 -8 0.1774654388427734 1 Unmodified _SQAGPSNGV_ ENSG00000170892|ENST00000396388|TSEN34 9.38312468134398 0.5871240394367778 3 {[QS]|[NT]}P[PG]APY 8 5 + 22.506 0.0 0.0 2.7603 2.7603 69.075 0.0 0.0 0.0 9.01162216501038 2.44287308088791 2.44287308088791 1.6385680263867035 0 0.0858955865873612 0.5086383061657274 0.4634679910804404 0.1803115997617927 {[QS]|[NT]}P[PG]APY;{[QS]|[NT]}P[QP]PY;{[QS]|[NT]}AG{[HG]|PP}PY;{[QS]|[NT]}Q{[HG]|PP}PY;[QP]S[PG]APY;[PS]Q[PG]APY;[QP]S[QP]PY;[PS]Q[QP]PY;[PG]AS[PG]APY;[PG]AS[QP]PY 2.7603;2.5593;2.4062;1.62;1.1158;1.0867;0.91489;0.88569;0.59216;0.38281 -;-;-;-;-;-;-;-;-;- 336 1 2.519 90195.3 0.5 932 4779 5712 HBL1_DMSO_200M_050219_1,5713 HBL1_DMSO_200M_050219_1,5713,SQAGPSNGV False True SQAGPSNGV 28.364703 408.69526976347 3341074.0 5712.0 ENSG00000170892|ENST00000396388|TSEN34 5.439645449320476 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5714 28.379 800.0 151840.0 25 0 22701.0 18709 LAKGNKEMK 9 112 509.7891425490534 1017.5637321649068 2 509.7896911501884 MULTI CID FTMS 0 0 0 5712 95141.90625 0.0674644717752571 -9 0.1980571746826172 2 Unmodified _LAKGNKEMK_ ENST00000568218.2_1_15:32605934-32606516:-|nuORF;ENST00000569415.1_1_15:30516861-30517158:+|nuORF 24.020572477871973 0.2255576514309169 3 {[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]TMK 9 6 + 45.664 0.0 0.0 4.4876 4.4876 86.001 0.0 0.0 0.0 1.966584062177432 21.05020898312993 1.966584062177432 25.21652514092061 0 1.924742501084005 0.0 0.805462187404089 0.0 {[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]TMK;{[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]G{M(Oxidation (M))|F}[VG];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[VA]|[{I|L}G]}[{I|L}P]G{M(Oxidation (M))|F}[VG];[TA]{[NV]|[RG]}{I|L}{I|L}EMK 4.4876;2.0095;1.5126;1.2566 -;-;-;- 295 1 2.519 98439.2 0.550000011920929 933 4779 5712 HBL1_DMSO_200M_050219_1,5714 HBL1_DMSO_200M_050219_1,5714,LAKGNKEMK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5715 28.392 800.0 59723.0 25 0 4882.0 -1 0 70 878.3801854025511 1754.745817871902 2 878.3823119997978 MULTI CID FTMS 0 0 0 5712 82337.4375 1.0 0 0.0 3 3 GQSA{[QG]|[NA]}T{I|L}N{NN|[MP]|[D{I|L}]|[EV]} 11 -1 50.705 0.0 0.0 2.8896 0.0 0.0 652.244432517775 0.0 652.244432517775 0.0 37.21063576698899 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 GQSA{[QG]|[NA]}T{I|L}N{NN|[MP]|[D{I|L}]|[EV]} 2.8896 - 298 1 2.519 39733.3 0.5 934 4779 5712 HBL1_DMSO_200M_050219_1,5715 HBL1_DMSO_200M_050219_1,5715, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5717 28.409 800.0 74335.0 25 0 6938.4 + 8201 EPSPSLIQSAN 11 107 571.7879484973578 1141.5613440615157 2 572.2894775271416 MULTI CID FTMS 0 0 0 5716 51627.765625 0.2873294333756652 8 -0.1417293548583984 1 Unmodified _EPSPSLIQSAN_ REV__ENSG00000156509|ENST00000428847|FBXO43;REV__ENST00000520987.1_1_8:101149771-101157363:-|nuORF 17.44264345198275 0.6723198055858692 3 SAN 3 -1 36.242 0.0 0.0 3.1748 0.0 0.0 851.4392259968655 0.0 851.4392259968655 0.0 19.586747011794323 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3807196863200844 SAN 3.1748 + + 122 + 1 2.519 48821.6 0.5899999737739563 935 4780 5716 HBL1_DMSO_200M_050219_1,5717 HBL1_DMSO_200M_050219_1,5717,EPSPSLIQSAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5718 28.422 800.0 22504.0 25 0 1765.4 -1 0 42 831.7075372696371 2492.100782409111 3 832.0405761599541 MULTI CID FTMS 0 0 0 5716 70377.7734375 1.0 0 0.0 2 3 W 1 -1 13.495 0.0 0.0 0.5415 0.0 0.0 2288.0109214245394 0.0 2288.0109214245394 0.0 -7.474250108400469 -7.474250108400469 0.0 0 0.0 0.0 0.0 0.0 W 0.5415 - 9 + 1 2.519 22624.6 0.4099999964237213 936 4780 5716 HBL1_DMSO_200M_050219_1,5718 HBL1_DMSO_200M_050219_1,5718, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5721 28.431 111.0 385830.0 25 0 21886.0 + 42030 VQSRVSNPTV 10 95 362.86841124744166 1085.583404342525 3 362.8679992556572 MULTI CID FTMS 0 0 0 5720 483651.625 0.0704722359775256 13 -0.279632568359375 1 Unmodified _VQSRVSNPTV_ REV__ENSG00000175809|ENST00000323684|CBLL2 17.11289562659939 0.5604042439455784 3 PGTSDGK[TP]V 10 -1 46.904 0.0 0.0 4.3206 0.0 0.0 128.09517104316564 0.0 128.09517104316564 0.0 26.38480365395424 0.0 0.0 0 0.4247425010840047 0.0 1.2302046884880935 0.0 PGTSDGK[TP]V 4.3206 - 624 1 2.532 48037.3 1.0 937 4782 5720 HBL1_DMSO_200M_050219_1,5721 HBL1_DMSO_200M_050219_1,5721,VQSRVSNPTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5722 28.436 278.0 360870.0 25 0 46828.0 + 40502 VISPAGVS 8 102 365.2106492336828 728.4067455341657 2 365.2101318240166 MULTI CID FTMS 0 0 0 5720 312640.03125 0.6652469783553111 -4 0.0816326141357421 2 Unmodified _VISPAGVS_ ENSG00000253309|ENST00000681248|SERPINE3;nc|ENSG00000253309|A8MV23|SERPINE3 53.57557251787612 0.1224291679108181 3 V{I|L}SPADK 7 3 + 81.331 0.0 0.0 11.166 11.166 98.002 0.0 0.0 0.0 52.30363589312036 13.897857944600702 13.897857944600702 19.11046889609668 0 0.8026048219588936 2.0 0.9476212463643424 0.1803115997617927 V{I|L}SPADK;V{I|L}SP[NS]{I|L};V{I|L}S[VS][QP] 11.166;8.542;7.4604 -;-;- 146 + 1 2.532 86673.2 1.0 938 4782 5720 HBL1_DMSO_200M_050219_1,5722 HBL1_DMSO_200M_050219_1,5722,VISPAGVS True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5724 28.452 800.0 69052.0 25 0 1998.6 -1 0 65 716.9190726885377 3579.558981109688 5 717.5239135622978 MULTI CID FTMS 0 0 0 5723 69557.9765625 0.938374981700814 1 -0.0300254821777343 1 3 GGSSTE 6 -1 35.9 0.0 0.0 1.0029 0.0 0.0 2400.0890847247256 658.2564791315061 3058.345563856232 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 GGSSTE 1.0029 - 163 + 1 2.532 47204.9 0.4399999976158142 939 4783 5723 HBL1_DMSO_200M_050219_1,5724 HBL1_DMSO_200M_050219_1,5724, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5725 28.466 800.0 31705.0 25 0 1834.5 -1 0 43 805.1781139207739 4020.854187270869 5 805.7795287966728 MULTI CID FTMS 0 0 0 5723 67410.0625 0.5422710911758919 -1 0.0098381042480468 2 3 D 1 -1 3.9794 0.0 0.0 0.098969 0.0 0.0 3216.482557487469 686.3264254205686 3902.8089829080377 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.098969 - 11 + 1 2.532 27628.5 0.4000000059604645 940 4783 5723 HBL1_DMSO_200M_050219_1,5725 HBL1_DMSO_200M_050219_1,5725, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5727 28.482 800.0 59576.0 25 0 3692.8 + 12902 GWSRQPFSQC 10 91 598.2704836706008 1194.5264144080015 2 598.2712280154228 MULTI CID FTMS 0 0 0 5726 62237.515625 0.1436400215791743 9 -0.2019920349121093 1 Unmodified _GWSRQPFSQC_ REV__ENST00000424989.1_1_1:37920801-37921029:-|nuORF 13.90604991867851 0.6142120002215601 3 AQQN 4 -1 25.762 0.0 0.0 2.1567 0.0 0.0 735.3188977025044 0.0 735.3188977025044 0.0 12.998285841398827 0.0 0.0 0 0.5317183090963749 0.0 0.0 0.4247425010840047 AQQN 2.1567 - 122 1 2.532 41674.0 0.5199999809265137 941 4784 5726 HBL1_DMSO_200M_050219_1,5727 HBL1_DMSO_200M_050219_1,5727,GWSRQPFSQC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5728 28.496 800.0 61296.0 25 0 10387.0 -1 0 51 872.6032556521831 3486.383916742332 4 872.8542358279228 MULTI CID FTMS 0 0 0 5726 98334.84375 0.5995665467202673 -3 0.0437450408935546 2 3 E 1 -1 6.9897 0.0 0.0 0.20049 0.0 0.0 2830.157977876901 524.1612032525999 3354.319181129501 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20049 - 11 + 1 2.532 52802.7 0.4600000083446502 942 4784 5726 HBL1_DMSO_200M_050219_1,5728 HBL1_DMSO_200M_050219_1,5728, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5732 28.52 800.0 83198.0 25 0 10779.0 43616 YAGYGYHSY 9 115 540.7227526189156 1079.430952304631 2 540.7222167849541 MULTI CID FTMS 0 0 0 5731 75476.4765625 0.8266022484873059 1 -0.0299911499023437 1 Unmodified _YAGYGYHSY_ ENSG00000091986|ENST00000206423|CCDC80;nc|ENSG00000091986|Q76M96-2|CCDC80;nc|ENSG00000091986|Q76M96-3|CCDC80 30.22481116460888 0.1466181017706357 3 {[WN]|[YH]}SADTSHY 9 7 + 72.375 0.0 0.0 6.7049 6.7049 91.364 0.0 0.0 0.0 11.38689707366744 11.38689707366744 11.38689707366744 11.38689707366744 0 1.2302046884880935 1.6989700043360187 0.75 0.0 {[WN]|[YH]}SADTSHY;HYSEGTHSY;{[WN]|[YH]}SAD{[HG]|PP}MY;HY[HM]{[QD]|[EN]|[WG]|[KD]|[RS]}SY;[HS]YADTSHY;{[{M(Oxidation (M))|F}C]|[YS]}HADTSHY;{[WN]|[YH]}SW{[HG]|PP}MY;{[WN]|[YH]}S[NP]{[QG]|[NA]}DY;{[{M(Oxidation (M))|F}C]|[YS]}HWTSHY;H[HM]Y{[QD]|[EN]|[WG]|[KD]|[RS]}SY 6.7049;5.65;4.37;4.1837;3.8535;3.8535;3.4685;3.3004;2.952;2.8887 -;-;-;-;-;-;-;-;-;- 556 1 2.551 56579.2 0.5899999737739563 943 4787 5731 HBL1_DMSO_200M_050219_1,5732 HBL1_DMSO_200M_050219_1,5732,YAGYGYHSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5733 28.534 800.0 122350.0 25 0 33562.0 25942 NLNLAQPLP 9 116 490.2832372896069 0 490.2840453982353 PEAK CID FTMS 0 0 0 5731 86405.90625 1.0 0 0.0 2 Unmodified _NLNLAQPLP_ ENSG00000145103|ENST00000344209|ILDR1;nc|ENSG00000145103|Q86SU0-2|ILDR1;nc|ENSG00000145103|Q86SU0-4|ILDR1;nc|ENSG00000145103|Q86SU0-5|ILDR1;nc|ENSG00000145103|Q86SU0-6|ILDR1 11.640296217721598 0.2934555500198502 3 D 1 9 6.5938 0.0 0.0 0.67383 0.0 0.0 636.3978211594889 224.10431848697505 860.5021396464639 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 D 0.67383 - 13 + 1 2.551 80306.4 0.5899999737739563 944 4787 5731 HBL1_DMSO_200M_050219_1,5733 HBL1_DMSO_200M_050219_1,5733,NLNLAQPLP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5735 28.55 800.0 113710.0 25 0 13304.0 -1 MQARKDAAV 9 120 503.26021211884006 1004.50587130448 2 503.7613403201103 MULTI CID FTMS 0 0 0 5734 62088.28515625 0.3966240123577121 11 -0.1874771118164062 1 Oxidation (M) _M(Oxidation (M))QARKDAAV_ ENST00000401088.8_1_1:16721635-16721806:+|nuORF 12.531546534597751 0.4974689918368763 3 [VP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV]KDV 9 -1 [VP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV]KD + + 11.99 -13.771 -1.5517 1.1936 1.1936 48.414 0.0 0.0 0.0 0.0 -8.187587626244124 -8.187587626244124 0.0 0 0.0 0.0 0.0 0.0 [VP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV]KDV 1.1936 - 48 + 1 2.551 75671.6 0.449999988079071 945 4788 5734 HBL1_DMSO_200M_050219_1,5735 HBL1_DMSO_200M_050219_1,5735,MQARKDAAV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5736 28.564 800.0 128670.0 25 0 21191.0 + 36123 SVSRDRKVK 9 111 537.8205816789623 1073.6266104247245 2 537.8207275271416 MULTI CID FTMS 0 0 0 5734 125074.609375 1.0 0 0.0 2 Unmodified _SVSRDRKVK_ REV__ENSG00000186174|ENST00000683865|BCL9L;REV__ENST00000527266.1_1_11:118773580-118779321:-|nuORF;REV__nc|ENSG00000186174|Q86UU0-2|BCL9L;REV__nc|ENSG00000186174|Q86UU0-3|BCL9L;REV__nc|ENSG00000186174|Q86UU0-4|BCL9L 15.847184025352805 0.4077185912009129 3 KMT[{I|L}P][WP]K 8 -1 28.391 0.0 0.0 2.6444 0.0 0.0 74.07847733732383 0.0 74.07847733732383 0.0 16.607888569878906 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3252574989159953 KMT[{I|L}P][WP]K 2.6444 - 196 + 1 2.551 86526.6 0.5400000214576721 946 4788 5734 HBL1_DMSO_200M_050219_1,5736 HBL1_DMSO_200M_050219_1,5736,SVSRDRKVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5737 28.578 800.0 175820.0 25 0 19811.0 + 17601 KPTAAFHLL 9 128 499.29320177176606 996.571850610332 2 499.2939330935478 MULTI CID FTMS 0 0 0 5734 113321.078125 0.3427323511162295 -3 0.0377578735351562 3 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 34.10243960390752 0.1078313939113124 3 KPTA 4 -1 46.983 0.0 0.0 4.7144 0.0 0.0 0.0 596.3155001275999 596.3155001275999 18.10857219290796 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7302046884880937 0.0 KPTA 4.7144 + + 566 + 1 2.551 110214.2 0.5199999809265137 947 4788 5734 HBL1_DMSO_200M_050219_1,5737 HBL1_DMSO_200M_050219_1,5737,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5739 28.595 800.0 31814.0 25 0 5999.3 -1 0 32 1163.1357950283996 3486.3855556853987 3 1163.468432605267 MULTI CID FTMS 0 0 0 5738 35417.70703125 0.4052518108636893 1 -0.0373954772949218 1 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20049 0.0 0.0 2817.0674537340306 519.2306612604124 3336.298114994443 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20049 - 3 + 1 2.559 34259.5 0.3400000035762787 948 4789 5738 HBL1_DMSO_200M_050219_1,5739 HBL1_DMSO_200M_050219_1,5739, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5740 28.601 331.0 365220.0 25 0 32832.0 + 39481 VARNEAPKI 9 140 333.19812135324025 996.5725346599208 3 333.1977111697197 MULTI CID FTMS 0 0 0 5738 175433.90625 0.5637519737748536 -6 0.1417388916015625 2 Unmodified _VARNEAPKI_ REV__ENST00000590751.5_1_19:38077596-38085217:-|nuORF 32.30548876998284 0.1201446275138228 3 [KP]{[QG]|[NA]}TTPR{I|L} 9 -1 + 49.913 0.0 0.0 5.0085 5.0085 78.541 0.0 0.0 0.0 3.415149811213496 29.362271033105287 3.415149811213496 3.719005324262241 0 0.3807196863200844 0.0 0.3494850021680094 0.6747425010840047 [KP]{[QG]|[NA]}TTPR{I|L};[KP]{[QG]|[NA]}EVAR{I|L};[KP][WQ]TPK{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GTPK{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GVAR{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S[QP]TPK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S[PA]GTPK{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GVA[VG]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S[QP]VAR{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S[PA]GVAR{I|L} 5.0085;4.6353;4.2591;4.2078;3.9339;3.2733;3.2274;3.0099;2.9995;2.9536 -;-;-;-;-;-;-;-;-;- 595 1 2.559 99798.9 1.0 949 4789 5738 HBL1_DMSO_200M_050219_1,5740 HBL1_DMSO_200M_050219_1,5740,VARNEAPKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5741 28.615 800.0 79806.0 25 0 4545.6 8464 ESSSSPHAPES 11 104 557.7357456130641 1113.456938292928 2 557.7359496951103 MULTI CID FTMS 0 0 0 5738 144093.03125 1.0 0 0.0 3 Unmodified _ESSSSPHAPES_ ENSG00000125850|ENST00000278780|OVOL2;ENST00000483661.5_1_20:18005282-18039681:-|nuORF 38.17557092003332 0.2405003631267018 3 {[ES]|[DT]|[{I|L}C]}[YR]EQSES 9 7 + 53.667 0.0 0.0 4.8199 4.8199 76.11 0.0 0.0 0.0 2.243012119929091 35.12817360018025 2.243012119929091 2.7545373444029053 0 0.6694451763165201 0.0 1.110924374808178 0.0 {[ES]|[DT]|[{I|L}C]}[YR]EQSES;{[ES]|[DT]|[{I|L}C]}S[{I|L}T]{M(Oxidation (M))|F}QSES;{[ES]|[DT]|[{I|L}C]}[YR]E[AG]SES;{[ES]|[DT]|[{I|L}C]}S[{I|L}T]{M(Oxidation (M))|F}[AG]SES;{[MG]|[TS]}D[{I|L}T]{M(Oxidation (M))|F}QSES;{[ES]|[DT]|[{I|L}C]}[YR]TQDES;[HD]YY[{I|L}T]SES;{[YC]|[HE]}[Q{I|L}]EQDES;{[MG]|[TS]}D[{I|L}T]{M(Oxidation (M))|F}[AG]SES;{[ES]|[DT]|[{I|L}C]}[YR]T[AG]DES 4.8199;4.5725;3.9929;3.7494;3.6868;3.6669;3.3422;2.9601;2.8637;2.8399 -;-;-;-;-;-;-;-;-;- 825 1 2.559 55134.6 0.5799999833106995 950 4789 5738 HBL1_DMSO_200M_050219_1,5741 HBL1_DMSO_200M_050219_1,5741,ESSSSPHAPES False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5743 28.624 373.0 161440.0 25 0 9614.5 + 34753 SQAGPSNGV 9 112 408.6957307866567 815.3769086401135 2 408.6956054568291 MULTI CID FTMS 0 0 0 5742 171399.46875 0.8905723383620322 3 -0.0528831481933593 1 Unmodified _SQAGPSNGV_ ENSG00000170892|ENST00000396388|TSEN34 13.90604991867851 0.4602628045680013 3 {[QS]|[NT]}AG 4 5 23.913 0.0 0.0 2.9327 0.0 0.0 0.0 469.2061377263041 469.2061377263041 10.72535163308464 0.0 0.0 0.0 0 0.0 0.6020599913279624 0.0 0.5189301784845296 + {[QS]|[NT]}AG 2.9327 + + 222 1 2.559 52356.4 1.0 951 4790 5742 HBL1_DMSO_200M_050219_1,5743 HBL1_DMSO_200M_050219_1,5743,SQAGPSNGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5744 28.627 147.0 542320.0 25 0 85560.0 -1 0 87 309.6824761132037 617.3503992932074 2 309.6817809939384 MULTI CID FTMS 0 0 0 5742 436008.59375 0.7950158299164624 -25 0.54833984375 2 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}A{I|L} 6 -1 + 27.576 0.0 0.0 4.4668 4.4668 81.241 0.0 0.0 0.0 2.9225868964851927 16.156103747906922 2.9225868964851927 8.416375079047505 0 0.7742275032520141 0.0 0.8913577739914502 0.3807196863200844 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QT]{I|L} 4.4668;3.1035 -;- 50 1 2.559 71339.8 1.0 952 4790 5742 HBL1_DMSO_200M_050219_1,5744 HBL1_DMSO_200M_050219_1,5744, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5745 28.632 226.0 364260.0 25 0 40781.0 -1 EGTACCVEG 9 97 463.1727864191088 924.3310199050176 2 463.1728088259697 MULTI CID FTMS 0 0 0 5742 354766.78125 0.8529065065754539 -14 0.318521499633789 3 Carbamidomethyl (C) _EGTACC(Carbamidomethyl (C))VEG_ ENST00000339594.8_1_7:72891424-72891535:-|nuORF 20.453626601364224 0.2830276176381075 3 {[DA]|[EG]}W 3 -1 31.21 0.0 0.0 3.3765 0.0 0.0 0.0 549.1707857721311 549.1707857721311 9.382484182756484 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[DA]|[EG]}W 3.3765 - 89 + 1 2.559 66367.9 1.0 953 4790 5742 HBL1_DMSO_200M_050219_1,5745 HBL1_DMSO_200M_050219_1,5745,EGTACCVEG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5746 28.645 800.0 38319.0 25 0 8408.4 -1 0 30 1180.4800262321985 3538.418249296796 3 1180.816699206829 MULTI CID FTMS 0 0 0 5742 74018.84375 0.7345063423422865 -1 0.0373954772949218 4 3 T 1 -1 6.9897 0.0 0.0 0.19754 0.0 0.0 2323.8865853337084 1110.4629610651002 3434.3495463988083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.19754 - 2 + 1 2.559 30864.6 0.3000000119209289 954 4790 5742 HBL1_DMSO_200M_050219_1,5746 HBL1_DMSO_200M_050219_1,5746, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5748 28.65 77.0 810960.0 25 0 136270.0 + 15692 IQRLETMK 8 66 509.7891425490534 1017.5637321649068 2 509.7893859744072 MULTI CID FTMS 0 0 0 5747 872870.625 0.6189465606146987 3 -0.0446319580078125 1 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 {[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]TMK 9 -1 + 44.103 0.0 0.0 4.3341 4.3341 85.528 0.0 0.0 0.0 0.1625748220535428 17.4595372608497 0.1625748220535428 25.21652514092061 0 1.924742501084005 0.0 0.7742275032520141 0.0 {[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]TMK;{[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]G{M(Oxidation (M))|F}[VG];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[VA]|[{I|L}G]}[{I|L}P]G{M(Oxidation (M))|F}[VG] 4.3341;1.856;1.8084 -;-;- 95 1 2.559 56695.9 1.0 955 4791 5747 HBL1_DMSO_200M_050219_1,5748 HBL1_DMSO_200M_050219_1,5748,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5749 28.664 800.0 124960.0 25 0 16587.0 + -1 PKRVDTMK 8 110 495.7738658688611 989.5331788045222 2 495.7744933962822 MULTI CID FTMS 0 0 0 5747 89893.140625 0.447670927423236 -13 0.3006744384765625 2 Oxidation (M) _PKRVDTM(Oxidation (M))K_ REV__ENSG00000184381|ENST00000332509|PLA2G6;REV__ENST00000496409.1_1_22:38511815-38516980:-|nuORF;REV__nc|ENSG00000184381|O60733-2|PLA2G6 22.736283301280096 0.5659792798204337 3 [KT]T[HK]TTK 8 -1 50.807 0.0 0.0 5.1344 0.0 0.0 0.0 60.97636802494552 60.97636802494552 27.06994074453036 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.6549471895720984 0.2614393726401688 [KT]T[HK]TTK 5.1344 - 398 1 2.559 81039.3 0.4699999988079071 956 4791 5747 HBL1_DMSO_200M_050219_1,5749 HBL1_DMSO_200M_050219_1,5749,PKRVDTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5752 28.684 800.0 99966.0 25 0 5319.2 + 13929 HYHEGTDSY 9 119 554.7200607818252 1107.4255686304502 2 554.7199584841728 MULTI CID FTMS 0 0 0 5751 93380.6640625 0.5203356989061946 -14 0.3196659088134765 1 Unmodified _HYHEGTDSY_ ENSG00000100554|ENST00000216442|ATP6V1D 85.35673624503755 0.0162188719545379 3 {[WN]|[YH]}HEGTDSY 9 0 + 81.297 0.0 0.0 7.3411 7.3411 87.852 0.0 0.0 0.0 12.945478681360612 16.478174818886373 12.945478681360612 5.440680443502757 0 1.0 1.2218487496163564 1.3494850021680094 0.0 + + {[WN]|[YH]}HEGTDSY;{[WN]|[YH]}EHGTDSY;GGWHEGTDSY;HMDTGEQQY;GGWEHGTDSY;{[YC]|[HE]}YHGTDSY;GG[{M(Oxidation (M))|F}T]G{[CT]|[{M(Oxidation (M))|F}G]}TDSY;{[{M(Oxidation (M))|F}C]|[YS]}[C(Carbamidomethyl (C))R]GTDSY;HMDTGE{[QS]|[NT]}{[CT]|[{M(Oxidation (M))|F}G]};GG[{M(Oxidation (M))|F}T]S{[CA]|SS}TDSY 7.3411;6.8498;6.1721;5.6952;5.6808;5.3871;4.7387;4.7289;4.5364;4.195 +;-;-;-;-;-;-;-;-;- + 547 1 2.559 66089.4 0.5400000214576721 957 4793 5751 HBL1_DMSO_200M_050219_1,5752 HBL1_DMSO_200M_050219_1,5752,HYHEGTDSY True True HYHEGTDSY 28.68438 554.719958484173 891373.375 5751.0 ENSG00000100554|ENST00000216442|ATP6V1D 8.716592788696289 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5753 28.69 307.0 247710.0 25 0 18742.0 + 3239 AYATHRDSY 9 129 361.8339631802147 1082.4800601408442 3 361.8333007693291 MULTI CID FTMS 0 0 0 5751 162453.609375 1.0 0 0.0 2 Unmodified _AYATHRDSY_ ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000204264|P28062-2|PSMB8 8.444304893310646 0.6198977621250997 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ATH 5 4 44.961 0.0 0.0 4.1535 0.0 0.0 0.0 536.2111300104124 536.2111300104124 31.86181873724173 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ATH 4.1535 + + 211 + 1 2.559 69399.7 1.0 958 4793 5751 HBL1_DMSO_200M_050219_1,5753 HBL1_DMSO_200M_050219_1,5753,AYATHRDSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5755 28.696 210.0 330320.0 25 0 40837.0 40503 VISPAGVS 8 95 365.2106492336828 728.4067455341657 2 365.2103759646416 MULTI CID FTMS 0 0 0 5754 276619.84375 0.5886018961553113 8 -0.043243408203125 1 Unmodified _VISPAGVS_ ENSG00000253309|ENST00000681248|SERPINE3;nc|ENSG00000253309|A8MV23|SERPINE3 46.92087301778293 0.1537303740847981 3 V{I|L}SPADK 7 3 + 78.134 0.0 0.0 10.727 10.727 96.879 0.0 0.0 0.0 36.32023214705406 12.628885006439418 12.628885006439418 12.628885006439418 0 0.5891368308784531 2.0 1.110924374808178 0.1861818737241735 V{I|L}SPADK;V{I|L}SP[NS]{I|L};[PS]ADK{I|L}V;[PS]A[VG]S{I|L}V;{[TV]|[{I|L}S]}[NP]S{I|L}V;[QP][VS]S{I|L}V 10.727;8.9929;4.5611;2.6252;0.47134;0.31491 -;-;-;-;-;- 140 + 1 2.559 61611.6 1.0 959 4794 5754 HBL1_DMSO_200M_050219_1,5755 HBL1_DMSO_200M_050219_1,5755,VISPAGVS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5756 28.706 548.0 171770.0 25 0 5539.3 + 19776 LGRSQPATGTV 11 151 362.86841124744166 1085.583404342525 3 362.8678466677666 MULTI CID FTMS 0 0 0 5754 176292.3125 0.0256873187338586 25 -0.2473678588867187 2 Unmodified _LGRSQPATGTV_ REV__ENST00000435011.6_3_6:142623767-142688843:+|nuORF;REV__ENST00000541199.5_3_6:142623767-142688843:+|nuORF 19.361941925380144 0.6323962752489956 3 [KP]G{[WS]|[C(Carbamidomethyl (C)){I|L}]}SKPTV 10 -1 + 63.677 0.0 0.0 5.8657 5.8657 78.937 0.0 0.0 0.0 1.6231105889105777 48.64007808576609 1.6231105889105777 2.174839442139067 0 0.5 0.0 1.9291746928241125 0.0 [KP]G{[WS]|[C(Carbamidomethyl (C)){I|L}]}SKPTV;[PG]K{[WS]|[C(Carbamidomethyl (C)){I|L}]}SKPTV;{[MS]|[{M(Oxidation (M))|F}A]}PR[HT]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;{[MS]|[{M(Oxidation (M))|F}A]}PR[HS]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L} 5.8657;5.6654;2.4545;0.38357 -;-;-;- 511 1 2.559 85559.7 1.0 960 4794 5754 HBL1_DMSO_200M_050219_1,5756 HBL1_DMSO_200M_050219_1,5756,LGRSQPATGTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5765 28.749 800.0 122920.0 25 0 22025.0 + 38866 TVISSHNRP 9 126 505.77317834538667 1009.5318037575734 2 506.2748901247978 MULTI CID FTMS 0 0 0 5764 73140.1484375 0.5761546369242078 -6 0.023345947265625 1 Unmodified _TVISSHNRP_ REV__ENSG00000239474|ENST00000284669|KLHL41;REV__nc|ENSG00000239474|O60662-2|KLHL41 16.942295170755138 0.3780752226737986 3 H{[TV]|[{I|L}S]} 3 -1 14.265 0.0 0.0 1.413 0.0 0.0 654.3448600954943 0.0 654.3448600954943 0.0 0.2853716820872183 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 H{[TV]|[{I|L}S]} 1.413 - 91 1 2.564 80748.7 0.6100000143051147 961 4802 5764 HBL1_DMSO_200M_050219_1,5765 HBL1_DMSO_200M_050219_1,5765,TVISSHNRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5769 28.774 800.0 26681.0 25 0 1429.2 -1 0 39 734.1335330726857 3665.6312830304287 5 734.1356689333916 MULTI CID FTMS 0 0 0 5768 14551.8203125 0.3399826452393416 1 -0.0161991119384765 1 3 A 1 -1 5.4846 0.0 0.0 0.14962 0.0 0.0 2674.23359123531 917.3373136958704 3591.5709049311804 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.14962 - 2 + 1 2.564 25616.0 0.5699999928474426 962 4805 5768 HBL1_DMSO_200M_050219_1,5769 HBL1_DMSO_200M_050219_1,5769, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5772 28.794 800.0 90769.0 25 0 52932.0 + 24485 MIFLIALSSQL 11 42 618.3568808302963 0 618.3574096560478 PEAK CID FTMS 0 0 0 5771 89581.015625 0.7896393786635251 -6 0.0481319427490234 1 Unmodified _MIFLIALSSQL_ ENSG00000279116|ENST00000624618|OR8D2 1.4819007175156935 0.4761840153648598 3 {I|L} 1 10 6.9897 0.0 0.0 0.56611 0.0 0.0 617.347971030229 501.2443026178344 1118.5922736480634 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.56611 + + 2 + 1 2.564 59958.3 0.5799999833106995 963 4807 5771 HBL1_DMSO_200M_050219_1,5772 HBL1_DMSO_200M_050219_1,5772,MIFLIALSSQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5773 28.807 800.0 148860.0 25 0 36158.0 + 34670 SPRDPAHTV 9 119 490.25149144853793 978.488429963876 2 490.2517578005791 MULTI CID FTMS 0 0 0 5771 115733.578125 0.6417962759789778 -13 0.0874176025390625 2 Unmodified _SPRDPAHTV_ ENSG00000080608|ENST00000397885|PUM3 26.268140514670165 0.1969607489560049 3 HTV 3 6 40.661 0.0 0.0 4.1555 0.0 0.0 623.3038810815193 0.0 623.3038810815193 0.0 20.07114189668181 0.0 0.0 0 1.0215465369040708 0.0 0.4247425010840047 0.0 + HTV 4.1555 + + 338 1 2.564 93450.7 0.6399999856948853 964 4807 5771 HBL1_DMSO_200M_050219_1,5773 HBL1_DMSO_200M_050219_1,5773,SPRDPAHTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5776 28.828 800.0 163570.0 25 0 18750.0 + 17661 KPTGARPSAL 10 109 499.29320177176606 996.571850610332 2 499.2924987673759 MULTI CID FTMS 0 0 0 5775 169591.8125 0.5129195873346071 18 -0.2222232818603515 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 26.268140514670165 0.3785003716575977 3 KPT 3 7 43.5 0.0 0.0 4.365 0.0 0.0 0.0 667.3521870106201 667.3521870106201 18.624824747511752 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 + KPT 4.365 + + 556 + 1 2.564 102677.2 0.7900000214576721 965 4809 5775 HBL1_DMSO_200M_050219_1,5776 HBL1_DMSO_200M_050219_1,5776,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5777 28.841 800.0 83281.0 25 0 5839.1 + 45213 YQWSVESEG 9 106 542.7305068628622 1083.4464607925242 2 542.7297241091728 MULTI CID FTMS 0 0 0 5775 90020.140625 0.8639656734459051 -1 0.0038375854492187 2 Unmodified _YQWSVESEG_ REV__ENSG00000134853|ENST00000257290|PDGFRA;REV__nc|ENSG00000134853|P16234-2|PDGFRA;REV__nc|ENSG00000134853|P16234-3|PDGFRA 24.020572477871973 0.2255576514309169 3 {[DA]|[EG]}S[YV]EQSW 9 -1 + 55.116 0.0 0.0 5.0871 5.0871 78.676 0.0 0.0 0.0 3.642082589887167 13.84003570500623 3.642082589887167 3.642082589887167 0 1.0 0.5376020021010439 0.9896518287104438 0.0 {[DA]|[EG]}S[YV]EQSW;{[ES]|[DT]|[{I|L}C]}G[YV]EQSW;{[DA]|[EG]}S[YV]E[AG]SW;{[ES]|[DT]|[{I|L}C]}G[YV]E[AG]SW;{[SA]|[TG]}D[YV]EQSW;{[DA]|[EG]}S[YV]TQDW;{[ES]|[DT]|[{I|L}C]}[YR]EQSEG;{[ES]|[DT]|[{I|L}C]}G[YV]TQDW;{[DA]|[EG]}AH{M(Oxidation (M))|F}[HN]SW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H{I|L}EQDW 5.0871;4.7509;4.2372;3.901;3.7968;3.7448;3.5471;3.4087;3.3258;3.223 -;-;-;-;-;-;-;-;-;- 511 1 2.564 55183.2 0.550000011920929 966 4809 5775 HBL1_DMSO_200M_050219_1,5777 HBL1_DMSO_200M_050219_1,5777,YQWSVESEG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5780 28.855 385.0 278500.0 25 0 22420.0 + 43618 YAIPPPARI 9 137 333.19812135324025 996.5725346599208 3 333.1976806521416 MULTI CID FTMS 0 0 0 5779 122746.5703125 0.3944426865189621 16 -0.188262939453125 1 Unmodified _YAIPPPARI_ REV__ENSG00000166317|ENST00000394810|SYNPO2L;REV__nc|ENSG00000166317|Q9H987-2|SYNPO2L 13.50788311687929 0.4710407108020397 3 [KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GVAR{I|L} 9 -1 + 35.626 0.0 0.0 3.5749 3.5749 77.297 0.0 0.0 0.0 4.652274865413737 24.913121923735424 4.652274865413737 6.53212513775344 0 0.3807196863200844 0.0 0.0 0.6747425010840047 [KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GVAR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GTPK{I|L};[KP][WQ]TPK{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GVA[VG]{I|L};[KP][WQ]VA[VG]{I|L};[VG]{[SA]|[TG]}[QP]VAR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RA[VG]{I|L};[VG]{[SA]|[TG]}[PA]GVAR{I|L};{[CP]|[EA]}N[KP]VAR{I|L};{[VA]|[{I|L}G]}[SG][QP]VAR{I|L} 3.5749;2.9194;2.8735;2.6509;2.5996;2.3473;2.048;1.9768;1.9506;1.4247 -;-;-;-;-;-;-;-;-;- 311 1 2.564 89321.3 1.0 967 4811 5779 HBL1_DMSO_200M_050219_1,5780 HBL1_DMSO_200M_050219_1,5780,YAIPPPARI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5781 28.868 800.0 185790.0 25 0 17702.0 + 3808 DAINKELDDI 10 159 382.5281105955847 1144.562502386954 3 382.5279724001884 MULTI CID FTMS 0 0 0 5779 102454.6484375 0.2027973023937148 -9 0.1120834350585937 2 Unmodified _DAINKELDDI_ REV__ENSG00000230989|ENST00000433866|HSBP1;REV__ENST00000569301.1_1_16:83842845-83843025:+|nuORF 34.93206674587334 0.2110832994570416 3 {[DA]|[EG]}[YR][KG]HAD{I|L} 10 -1 + 55.027 0.0 0.0 4.8077 4.8077 76.66 0.0 0.0 0.0 2.6449798674442206 25.664427547641363 2.6449798674442206 3.0102999566398125 0 1.0629529932484498 2.0 0.7742275032520141 0.0 {[DA]|[EG]}[YR][KG]HAD{I|L};{[DA]|[EG]}[YR][KG]AHD{I|L};DA{I|L}[KP]DN[HV]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD][KG]HAD{I|L};{[DA]|[EG]}[YR][KQ]HD{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD][KG]AHD{I|L};[H{I|L}]QQ[PS]HAD{I|L};[H{I|L}]QQ[PS]AHD{I|L};W{I|L}[WH][RN]S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD][KQ]HD{I|L} 4.8077;4.5447;4.4383;3.5371;3.3633;3.2741;2.6896;2.4266;2.1359;2.0927 -;-;-;-;-;-;-;-;-;- 483 1 2.564 122348.2 0.5299999713897705 968 4811 5779 HBL1_DMSO_200M_050219_1,5781 HBL1_DMSO_200M_050219_1,5781,DAINKELDDI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5784 28.878 155.0 551060.0 25 0 90483.0 -1 0 105 309.6824761132037 617.3503992932074 2 309.6818725466728 MULTI CID FTMS 0 0 0 5783 498884.0 0.9096625226599548 -2 0.0270633697509765 1 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}A{I|L} 6 -1 + 27.853 0.0 0.0 4.5118 4.5118 83.612 0.0 0.0 0.0 2.319393642848482 15.089140228085718 2.319393642848482 9.6881054543428 0 0.7742275032520141 0.0 0.6989700043360187 0.4247425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}A{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[TA]A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QT]{I|L} 4.5118;2.9425;2.8632 -;-;- 80 1 2.564 72194.3 1.0 969 4813 5783 HBL1_DMSO_200M_050219_1,5784 HBL1_DMSO_200M_050219_1,5784, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5785 28.892 800.0 98396.0 25 0 9620.1 17522 KPLEMGIL 8 117 450.7665488936275 899.518544854055 2 450.7662841677666 MULTI CID FTMS 0 0 0 5783 41475.57421875 0.1945627379547256 -10 0.122903823852539 2 Unmodified _KPLEMGIL_ ENSG00000185958|ENST00000327337|FAM186A 19.438996006549623 0.6237395211498085 3 KPT 3 6 38.06 0.0 0.0 4.2311 0.0 0.0 0.0 570.3002413385374 570.3002413385374 26.070006276765483 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 KPT 4.2311 - 122 + 1 2.564 65305.0 0.5400000214576721 970 4813 5783 HBL1_DMSO_200M_050219_1,5785 HBL1_DMSO_200M_050219_1,5785,KPLEMGIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5790 28.92 800.0 101580.0 25 0 14249.0 + 17751 KQDETQTKI 9 111 545.7906098111989 1089.5666666891975 2 545.7908203005791 MULTI CID FTMS 0 0 0 5789 80881.125 0.7498900457027426 1 -0.0301055908203125 1 Unmodified _KQDETQTKI_ ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1 67.08073823543168 0.0222274355215578 3 KQDETQT{I|L}K 9 2 + 55.21 0.0 0.0 5.0671 5.0671 76.614 0.0 0.0 0.0 14.973024840566469 2.480941210454944 2.480941210454944 2.480941210454944 0 2.839136830878453 0.0 0.7059771852360797 0.3494850021680094 KQDETQT{I|L}K;KQDETQTK{I|L};[AG]KDETQT{I|L}K;[KQ]DETQT{I|L}K;K[AG]DETQT{I|L}K;K[AG]DETQTK{I|L};[AG][WR]MQT{I|L}K;[AG]KDET[AG]T{I|L}K;[KQ]DET[AG]T{I|L}K;[AG]TAAETQT{I|L}K 5.0671;4.8394;4.6476;4.4165;4.222;3.9943;3.8239;3.8065;3.5714;3.2474 -;+;-;-;-;-;-;-;-;- + 437 + 1 2.564 67775.2 0.6499999761581421 971 4817 5789 HBL1_DMSO_200M_050219_1,5790 HBL1_DMSO_200M_050219_1,5790,KQDETQTKI True True KQDETQTKI 28.919604 545.790820300579 608028.0 5789.0 ENSG00000044115|ENST00000302763|CTNNA1;;nc|ENSG00000044115|P35221-3|CTNNA1;;nc|ENSG00000044115|P35221-2|CTNNA1;;ENST00000522792.1_1_5:138268134-138269775:+|nuORF 5.419123490651448 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5791 28.933 800.0 129290.0 25 0 9591.8 + 38361 TQPPPHSSV 9 145 475.2409109190236 948.4672689048472 2 475.2406799197197 MULTI CID FTMS 0 0 0 5789 95151.625 0.8110467539905041 -10 0.125986099243164 2 Unmodified _TQPPPHSSV_ ENSG00000106351|ENST00000300176|AGFG2 14.838274106304384 0.4350285940865338 3 [QT]PPYQ 6 5 29.614 0.0 0.0 3.1223 0.0 0.0 0.0 231.08904443912343 231.08904443912343 8.900925144087779 0.0 0.0 0.0 0 0.5 0.6989700043360187 0.0 0.0 [QT]PPYQ 3.1223 - 413 + 1 2.564 83017.6 0.6000000238418579 972 4817 5789 HBL1_DMSO_200M_050219_1,5791 HBL1_DMSO_200M_050219_1,5791,TQPPPHSSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5796 28.962 800.0 64034.0 25 0 15644.0 -1 FCCCCCFCCGA 11 74 667.1763750965696 0 667.1777831912041 PEAK CID FTMS 0 0 0 5795 73840.4296875 0.4437821271717402 -5 0.0461330413818359 1 3 Carbamidomethyl (C) _FC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CCFCCGA_ ENSG00000163793|ENST00000296097|DNAJC5G 0.0 0.4761840153648598 3 N 1 -1 4.6041 0.0 0.0 0.34556 0.0 0.0 696.0275415976329 519.2473848932249 1215.2749264908578 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.34556 - 2 + 1 2.564 45331.7 0.6100000143051147 973 4821 5795 HBL1_DMSO_200M_050219_1,5796 HBL1_DMSO_200M_050219_1,5796,FCCCCCFCCGA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5797 28.976 800.0 163770.0 25 0 5680.1 + 38123 TPLYFFISV 9 170 362.86841124744166 1085.583404342525 3 362.8676330447197 MULTI CID FTMS 0 0 0 5795 115135.875 0.0167762954429831 52 -1.1306476593017578 2 Unmodified _TPLYFFISV_ ENSG00000180433|ENST00000641861|OR6K6;nc|ENSG00000180433|Q8NGW6|OR6K6 42.09456458481378 0.0639583784996157 3 [KP]G{[WS]|[C(Carbamidomethyl (C)){I|L}]}SKPTV 10 7 + 62.88 0.0 0.0 5.7923 5.7923 77.045 0.0 0.0 0.0 0.7918124604762511 33.031447548652004 0.7918124604762511 1.238516409670858 0 0.4247425010840047 0.0 1.6237125054200234 0.0 [KP]G{[WS]|[C(Carbamidomethyl (C)){I|L}]}SKPTV;[PG]K{[WS]|[C(Carbamidomethyl (C)){I|L}]}SKPTV;[KP]G{[WS]|[C(Carbamidomethyl (C)){I|L}]}KSPTV;[TP]K[NS]RSPTV;[TP]K[NS]SRPTV;[PG]K{[WS]|[C(Carbamidomethyl (C)){I|L}]}KSPTV;[TP][YV]PGRPTV;[TP]K[{M(Oxidation (M))|F}V][TP]PTV;[KG]P{[WS]|[C(Carbamidomethyl (C)){I|L}]}SKPTV;[KP]T[NS]RSPTV 5.7923;5.6782;5.4914;5.4644;5.3833;5.3774;5.0249;4.9315;4.8711;4.5784 -;-;-;-;-;-;-;-;-;- 3375 1 2.564 117402.6 0.6200000047683716 974 4821 5795 HBL1_DMSO_200M_050219_1,5797 HBL1_DMSO_200M_050219_1,5797,TPLYFFISV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5798 28.989 800.0 46817.0 25 0 4587.5 -1 0 54 927.40682441367 3705.59819178828 4 927.9063598513604 MULTI CID FTMS 0 0 0 5795 73354.6640625 0.387416985731989 -5 0.0461330413818359 3 3 ATQG 4 -1 28.928 0.0 0.0 0.78065 0.0 0.0 2696.188901213976 649.2201632135374 3345.4090644275134 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 ATQG 0.78065 - 111 + 1 2.564 35867.2 0.5199999809265137 975 4821 5795 HBL1_DMSO_200M_050219_1,5798 HBL1_DMSO_200M_050219_1,5798, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5801 29.01 800.0 82197.0 25 0 6167.1 + -1 RHDCLNVNE 9 116 578.7599883064302 1155.5054236796602 2 578.7607299685478 MULTI CID FTMS 0 0 0 5800 81356.5859375 0.5871619136157896 -5 0.0597820281982421 1 Carbamidomethyl (C) _RHDC(Carbamidomethyl (C))LNVNE_ REV__ENSG00000162402|ENST00000294383|USP24 18.1463463914782 0.3454829746528889 3 VDTHE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SE 9 -1 41.393 0.0 0.0 3.5822 0.0 0.0 83.03770644355625 0.0 83.03770644355625 0.0 17.170846891215277 0.0 0.0 0 1.5924778212679485 0.0 0.3494850021680094 0.0 VDTHE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SE 3.5822 - 285 1 2.578 54462.9 0.5400000214576721 976 4823 5800 HBL1_DMSO_200M_050219_1,5801 HBL1_DMSO_200M_050219_1,5801,RHDCLNVNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5805 29.034 800.0 81830.0 25 0 9699.1 -1 0 107 531.2915985820888 530.2843221154887 1 531.2919189333916 MULTI CID FTMS 0 0 0 5804 36992.1875 0.4686138106576537 1 -0.0162620544433593 1 3 T{M(Oxidation (M))|F}K 3 -1 23.823 0.0 0.0 4.4925 0.0 0.0 136.0956452129481 0.0 136.0956452129481 0.0 8.606668181871136 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 T{M(Oxidation (M))|F}K 4.4925 - 43 + 1 2.578 57968.1 0.5899999737739563 977 4826 5804 HBL1_DMSO_200M_050219_1,5805 HBL1_DMSO_200M_050219_1,5805, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5808 29.054 800.0 270510.0 25 0 10842.0 + 31824 RTATKTRSN 9 224 345.52710717968927 1033.5594921392678 3 345.5268432497978 MULTI CID FTMS 0 0 0 5807 160176.609375 0.0032112695488016 -10 0.1039810180664062 1 Unmodified _RTATKTRSN_ REV__ENST00000481667.1_1_7:72954286-72958015:-|nuORF 20.41453444215458 0.284085796332423 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 30.08 20.604 4.8002 2.9104 2.9104 50.035 0.0 0.0 0.0 0.0 16.358696646399903 0.0 0.0 0 0.5 0.0 0.7614393726401688 0.2059771852360797 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.9104 - 456 + 1 2.578 183805.6 0.6399999856948853 978 4828 5807 HBL1_DMSO_200M_050219_1,5808 HBL1_DMSO_200M_050219_1,5808,RTATKTRSN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5809 29.056 89.0 1239600.0 25 0 202310.0 + -1 IQRLETMK 8 92 517.7865055958047 1033.5584582584092 2 517.7867919802666 MULTI CID FTMS 0 0 0 5807 635162.25 0.0026086543225736 -18 0.19598388671875 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 KTT[{I|L}P][WP]K 8 -1 51.476 0.0 0.0 4.9805 0.0 0.0 63.99811464669387 0.0 63.99811464669387 0.0 22.090606190045108 0.0 0.0 0 1.6861818737241734 0.0 1.3494850021680094 0.3494850021680094 KTT[{I|L}P][WP]K 4.9805 - 288 + 1 2.578 89443.4 1.0 979 4828 5807 HBL1_DMSO_200M_050219_1,5809 HBL1_DMSO_200M_050219_1,5809,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5810 29.069 800.0 154340.0 25 0 24779.0 + -1 SVRYSSSK 8 151 478.2458792890353 954.4772056448708 2 478.2452880740166 MULTI CID FTMS 0 0 0 5807 140958.234375 0.8082217749684307 -3 0.0242557525634765 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SVRYSSSK_ ENSG00000186395|ENST00000269576|KRT10;P13645 38.61474834105838 0.2574664000319577 3 GQQYSSSK 8 -1 59.786 0.0 0.0 6.2638 0.0 0.0 71.07420546699375 0.0 71.07420546699375 0.0 29.353415603609747 0.0 0.0 0 2.1989700043360187 0.0 0.3807196863200844 0.0 GQQYSSSK 6.2638 - 492 1 2.578 97450.4 0.6899999976158142 980 4828 5807 HBL1_DMSO_200M_050219_1,5810 HBL1_DMSO_200M_050219_1,5810,SVRYSSSK False False SVRYSSSK 29.069478 478.245288074017 814027.5 5807.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 4.955288569132487 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5812 29.084 593.0 211630.0 25 0 50725.0 + 34671 SPRDPAHTV 9 117 490.25149144853793 978.488429963876 2 490.2515441775322 MULTI CID FTMS 0 0 0 5811 86517.296875 0.4797784691506759 9 -0.304168701171875 1 Unmodified _SPRDPAHTV_ ENSG00000080608|ENST00000397885|PUM3 26.268140514670165 0.1969607489560049 3 V{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}A]{[WT]|[RM]} 8 6 + 40.619 0.0 0.0 4.1512 4.1512 74.986 0.0 0.0 0.0 19.520908980843217 2.503859178250778 2.503859178250778 3.042734161956844 0 0.4698565171985375 2.0 0.8807196863200843 0.0 V{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}A]{[WT]|[RM]};[VG]AR[HC]HTV;{[QV]|[N{I|L}]|[RA]|[KV]}R[HC]HTV;[VG]AR[DP]HEV;[VG]AR[WY]EV;{[QV]|[N{I|L}]|[RA]|[KV]}R[DP]HEV;[HT]K[QT]HEV;{[QV]|[N{I|L}]|[RA]|[KV]}R[WY]EV;[HT]{[{M(Oxidation (M))|F}H]|[RQ]}[{I|L}P]EV 4.1512;3.8402;3.1411;2.7139;2.3595;2.0149;1.9582;1.6674;0.83715 -;-;-;-;-;-;-;-;- 172 + 1 2.589 99907.2 1.0 981 4829 5811 HBL1_DMSO_200M_050219_1,5812 HBL1_DMSO_200M_050219_1,5812,SPRDPAHTV False True SPRDPAHTV 29.083572 490.251544177532 1271828.5 5811.0 ENSG00000080608|ENST00000397885|PUM3 4.441064715385437 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5813 29.095 665.0 199360.0 25 0 26651.0 + 33853 SLETPVVA 8 144 408.229058269204 814.4435636052079 2 408.2285949587822 MULTI CID FTMS 0 0 0 5811 117333.1484375 0.3938240243662216 -3 0.0521869659423828 2 Unmodified _SLETPVVA_ REV__ENSG00000118849|ENST00000237696|RARRES1 26.34127834903884 0.4900704351052977 3 {[VA]|[{I|L}G]}D{I|L}{I|L}DAV 8 -1 + 25.34 0.0 0.0 3.1113 3.1113 76.855 0.0 0.0 0.0 0.6694678963061307 8.26127041685373 0.6694678963061307 7.060352557497069 0 0.4876954943324546 0.0 0.3807196863200844 0.0 {[VA]|[{I|L}G]}D{I|L}{I|L}DAV;{[TV]|[{I|L}S]}[EP]TVAV;{[VA]|[{I|L}G]}{I|L}{I|L}DDAV 3.1113;2.2444;1.8326 -;-;- 134 1 2.589 109340.9 1.0 982 4829 5811 HBL1_DMSO_200M_050219_1,5813 HBL1_DMSO_200M_050219_1,5813,SLETPVVA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5814 29.109 800.0 40186.0 25 0 2125.5 -1 0 74 678.2948799459333 2709.150413917333 4 678.2948486208916 MULTI CID FTMS 0 0 0 5811 64733.3515625 0.6490284941016273 -6 0.0762233734130859 3 3 [HD]Y 3 -1 29.604 0.0 0.0 1.0927 0.0 0.0 0.0 2290.978513853133 2290.978513853133 22.156614721573163 0.0 0.0 0.0 0 0.0 2.0 0.6382104921644451 0.0 [HD]Y 1.0927 - 194 1 2.589 29885.5 0.4199999868869781 983 4829 5811 HBL1_DMSO_200M_050219_1,5814 HBL1_DMSO_200M_050219_1,5814, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5817 29.118 142.0 345810.0 25 0 23695.0 + 44948 YPQFEQSE 8 92 514.2207520317689 1026.4269511303378 2 514.2205078005791 MULTI CID FTMS 0 0 0 5816 373112.5 0.0730938732107685 -6 0.0996437072753906 1 Unmodified _YPQFEQSE_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3 20.453626601364224 0.6087503291685402 3 {[ES]|[DT]|[{I|L}C]}EVQ[YG]SE 9 7 {[ES]|[DT]|[{I|L}C]}E + + 37.95 5.5462 1.607 3.6973 3.6973 51.728 0.0 0.0 0.0 0.0 26.9812969097282 0.0 0.0 0 0.5 0.0 0.7059771852360797 0.5 {[ES]|[DT]|[{I|L}C]}EVQ[YG]SE 3.6973 - 323 + 1 2.589 44450.0 1.0 984 4831 5816 HBL1_DMSO_200M_050219_1,5817 HBL1_DMSO_200M_050219_1,5817,YPQFEQSE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5818 29.126 461.0 151590.0 25 0 21759.0 + 4559 DAYRDKQHI 9 119 382.5281105955847 1144.562502386954 3 382.5275451540947 MULTI CID FTMS 0 0 0 5816 65941.3828125 0.1305234535907269 11 -0.342599868774414 2 Unmodified _DAYRDKQHI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 13.042465956692816 0.4836390050082244 3 DA 2 7 40.355 0.0 0.0 3.5258 0.0 0.0 0.0 955.4756837267694 955.4756837267694 17.171076711231713 0.0 0.0 0.0 0 0.2396518287104437 2.0 0.0 0.0 + DA 3.5258 + + 73 + 1 2.589 62208.6 1.0 985 4831 5816 HBL1_DMSO_200M_050219_1,5818 HBL1_DMSO_200M_050219_1,5818,DAYRDKQHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5821 29.135 116.0 503210.0 25 0 87709.0 -1 0 83 309.6824761132037 617.3503992932074 2 309.6818725466728 MULTI CID FTMS 0 0 0 5820 467337.40625 0.8521406256819924 18 -0.5885944366455078 1 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}A{I|L} 6 -1 + 31.942 0.0 0.0 5.1741 5.1741 86.103 0.0 0.0 0.0 6.28022170376731 19.177849595123 6.28022170376731 10.687587626244124 0 0.8494850021680094 0.0 0.6747425010840047 0.3054621874040891 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QT]{I|L} 5.1741;3.4429 -;- 56 1 2.589 53665.4 1.0 986 4833 5820 HBL1_DMSO_200M_050219_1,5821 HBL1_DMSO_200M_050219_1,5821, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5822 29.149 800.0 122940.0 25 0 12605.0 17523 KPLEMGIL 8 134 450.7665488936275 899.518544854055 2 450.7670776247978 MULTI CID FTMS 0 0 0 5820 125080.8984375 0.5867569653763894 10 -0.3397865295410156 2 Unmodified _KPLEMGIL_ ENSG00000185958|ENST00000327337|FAM186A 19.438996006549623 0.6237395211498085 3 KP[QP]HKD 7 6 39.198 0.0 0.0 4.3577 0.0 0.0 0.0 66.03566156558827 66.03566156558827 26.433771968362663 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7510912013506126 0.0 KP[QP]HKD 4.3577 - 240 + 1 2.589 79029.4 0.7300000190734863 987 4833 5820 HBL1_DMSO_200M_050219_1,5822 HBL1_DMSO_200M_050219_1,5822,KPLEMGIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5823 29.162 800.0 172590.0 25 0 6603.5 + -1 EKYENKMTEK 10 132 439.21293319502894 1314.6169701852868 3 439.2130615115166 MULTI CID FTMS 0 0 0 5820 80266.3203125 0.3291105111105388 -3 0.02093505859375 3 Oxidation (M) _EKYENKM(Oxidation (M))TEK_ REV__ENSG00000185792|ENST00000332836|NLRP9;REV__nc|ENSG00000185792|Q7RTR0-2|NLRP9 24.95707706330732 0.4079579053029958 3 HTVEK 5 -1 62.155 0.0 0.0 4.728 0.0 0.0 702.2942171618882 0.0 702.2942171618882 0.0 40.26080296090168 0.0 0.0 0 2.048455006504028 0.0 1.274227503252014 0.0 HTVEK 4.728 - 597 1 2.589 111992.0 0.6100000143051147 988 4833 5820 HBL1_DMSO_200M_050219_1,5823 HBL1_DMSO_200M_050219_1,5823,EKYENKMTEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5825 29.17 130.0 562390.0 25 0 94039.0 25565 NEVYEALVY 9 103 367.18116905571503 1098.5216777673452 3 367.1807739138603 MULTI CID FTMS 0 0 0 5824 369161.09375 0.1228712034617251 -4 0.0532455444335937 1 Unmodified _NEVYEALVY_ ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8-4|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2 16.942295170755138 0.3780752226737986 3 {[QD]|[EN]|[WG]|[KD]|[RS]}Y 3 6 17.492 0.0 0.0 1.5923 0.0 0.0 0.0 689.3485570000202 689.3485570000202 2.591962522349359 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.2742275032520141 {[QD]|[EN]|[WG]|[KD]|[RS]}Y 1.5923 - 77 1 2.575 64840.6 1.0 989 4834 5824 HBL1_DMSO_200M_050219_1,5825 HBL1_DMSO_200M_050219_1,5825,NEVYEALVY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5826 29.175 299.0 532400.0 25 0 75320.0 -1 0 178 303.1704047339895 604.3262565347791 2 303.1699706912041 MULTI CID FTMS 0 0 0 5824 271366.46875 0.1236834082635648 -4 0.0532455444335937 2 3 P{I|L}T{M(Oxidation (M))|F}K 5 -1 + 64.232 0.0 0.0 10.629 10.629 99.35 0.0 0.0 0.0 42.40901454884286 14.3753063169585 14.3753063169585 50.80810689500888 0 0.6307196863200843 1.6989700043360187 0.6382104921644451 0.2614393726401688 P{I|L}T{M(Oxidation (M))|F}K;[{M(Oxidation (M))|F}T]K{I|L}P;[KT]{M(Oxidation (M))|F}{I|L}P;[{I|L}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P 10.629;2.2212;1.9792;0.36969 -;-;-;- 183 + 1 2.575 129781.7 1.0 990 4834 5824 HBL1_DMSO_200M_050219_1,5826 HBL1_DMSO_200M_050219_1,5826, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5828 29.191 800.0 34865.0 25 0 1993.1 + 43558 WYQFQELYYWY 11 53 844.876596149263 1687.738639365326 2 845.3782226443291 MULTI CID FTMS 0 0 0 5827 137151.859375 1.0 0 0.0 1 Unmodified _WYQFQELYYWY_ REV__ENSG00000137574|ENST00000260129|TGS1;REV__ENST00000523948.5_1_8:56686169-56737149:+|nuORF 0.0 0.8751479354844584 3 ATQG 4 -1 24.725 0.0 0.0 1.465 0.0 0.0 678.324259777675 649.2227266900999 1327.5469864677748 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 ATQG 1.465 - 55 + 1 2.575 29711.4 0.4600000083446502 991 4835 5827 HBL1_DMSO_200M_050219_1,5828 HBL1_DMSO_200M_050219_1,5828,WYQFQELYYWY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5829 29.199 428.0 96106.0 25 0 8840.3 + 7472 EGRRDKMK 8 83 510.27496211299086 1018.5353712927816 2 510.2747985720634 MULTI CID FTMS 0 0 0 5827 216290.03125 0.172229847263386 -10 0.1616420745849609 2 Unmodified _EGRRDKMK_ REV__ENST00000378204.6_1_8:119123470-119123650:-|nuORF 8.593279151180031 0.7721714526254883 3 K 1 -1 15.139 0.0 0.0 1.4863 0.0 0.0 872.4293359918037 0.0 872.4293359918037 0.0 1.6439432979444837 0.0 0.0 0 0.0 0.0 0.0 0.1643943297944484 K 1.4863 + + 35 + 1 2.575 40093.3 1.0 992 4835 5827 HBL1_DMSO_200M_050219_1,5829 HBL1_DMSO_200M_050219_1,5829,EGRRDKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5830 29.213 800.0 224400.0 25 0 24074.0 + 45133 YQDPQGRHV 9 150 550.2678611435208 1098.5211693538415 2 550.2679931521416 MULTI CID FTMS 0 0 0 5827 128526.84375 0.2246407754518039 -2 0.0450553894042968 3 Unmodified _YQDPQGRHV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 99.7552728972412 0.0110101799492648 3 YQDPQGRVH 9 2 + 56.701 0.0 0.0 5.1616 5.1616 84.473 0.0 0.0 0.0 27.809151320072683 4.402369671232052 4.402369671232052 9.208187539523742 0 1.424742501084005 0.0 0.3807196863200844 1.5138793319624575 YQDPQGRVH;YQDP[AG]GRVH;Y[AG]DPQGRVH;YQDV{[WN]|[YH]}{M(Oxidation (M))|F}K;Y[AG]DP[AG]GRVH;{[NV]|[RG]}[HD]KVDC(Carbamidomethyl (C)){I|L};Y[AG]DV{[WN]|[YH]}{M(Oxidation (M))|F}K;YQVD{[WN]|[YH]}{M(Oxidation (M))|F}K;YQVW[DN]{M(Oxidation (M))|F}K;{[NV]|[RG]}[HD]KVD{[CA]|SS}V 5.1616;4.3233;4.3233;4.1128;3.4891;3.3156;3.2696;2.6347;2.5016;2.4814 -;-;-;-;-;-;-;-;-;- 1145 + 1 2.575 137549.0 0.6000000238418579 993 4835 5827 HBL1_DMSO_200M_050219_1,5830 HBL1_DMSO_200M_050219_1,5830,YQDPQGRHV True True YQDPQGRHV 29.212546 550.267993152142 34561975.5 5827.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 7.97704537709554 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5831 29.224 652.0 134120.0 25 0 12831.0 -1 SVDEVIQFMK 10 132 404.5386667917993 1210.594170975598 3 404.5387451052666 MULTI CID FTMS 0 0 0 5827 95715.5 0.4727853257146914 2 -0.1006546020507812 4 Oxidation (M) _SVDEVIQFM(Oxidation (M))K_ ENSG00000102098|ENST00000251900|SCML2;nc|ENSG00000102098|Q9UQR0-2|SCML2 6.1918466704503565 0.6979955778746556 3 HVEQEK 6 -1 22.322 0.0 0.0 1.8439 0.0 0.0 442.216193535948 0.0 442.216193535948 0.0 5.956385522334241 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.1694451763165201 HVEQEK 1.8439 - 499 + 1 2.575 73208.9 1.0 994 4835 5827 HBL1_DMSO_200M_050219_1,5831 HBL1_DMSO_200M_050219_1,5831,SVDEVIQFMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5833 29.23 52.0 1071200.0 25 0 121400.0 + 2779 ATRTPWTLA 9 83 339.5237192688679 1015.549328406804 3 339.5234252810478 MULTI CID FTMS 0 0 0 5832 1012841.875 0.385232334596659 -6 0.1145172119140625 1 Unmodified _ATRTPWTLA_ REV__ENST00000292539.8_1_8:145722821-145724209:+|nuORF 9.38312468134398 0.5871240394367778 3 P[HQ]K 4 -1 16.538 0.0 0.0 1.6285 0.0 0.0 507.2749276273101 0.0 507.2749276273101 0.0 6.493400967757268 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.6462566630072955 P[HQ]K 1.6285 - 89 + 1 2.575 52210.1 1.0 995 4836 5832 HBL1_DMSO_200M_050219_1,5833 HBL1_DMSO_200M_050219_1,5833,ATRTPWTLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5834 29.234 225.0 448790.0 25 0 48280.0 16242 IVPLLEKAD 9 109 333.20130672688964 996.582090780869 3 333.2010986208916 MULTI CID FTMS 0 0 0 5832 307152.15625 1.0 0 0.0 2 Unmodified _IVPLLEKAD_ ENSG00000115970|ENST00000405975|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA;nc|ENSG00000115970|Q6YHU6-6|THADA 23.78978130925829 0.2284941198415988 3 {I|L}VQ{M(Oxidation (M))|F} 4 7 38.928 0.0 0.0 3.9061 0.0 0.0 0.0 506.2788179986938 506.2788179986938 27.81865655543953 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 {I|L}VQ{M(Oxidation (M))|F} 3.9061 - 42 + 1 2.575 85014.5 1.0 996 4836 5832 HBL1_DMSO_200M_050219_1,5834 HBL1_DMSO_200M_050219_1,5834,IVPLLEKAD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5835 29.24 314.0 167330.0 25 0 5538.5 -1 MFEMKCKN 8 107 544.2427025631791 1086.4708521931582 2 544.2427245974541 MULTI CID FTMS 0 0 0 5832 263070.1875 0.548854584777365 -8 0.1859130859375 3 Carbamidomethyl (C) _MFEMKC(Carbamidomethyl (C))KN_ ENST00000467585.1_1_3:186503720-186503825:+|nuORF 4.75600775471527 0.7954636275367004 3 R 1 -1 10.713 0.0 0.0 0.98607 0.0 0.0 912.3583929419848 0.0 912.3583929419848 0.0 4.999999999999999 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.98607 - 56 + 1 2.575 44522.3 1.0 997 4836 5832 HBL1_DMSO_200M_050219_1,5835 HBL1_DMSO_200M_050219_1,5835,MFEMKCKN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5836 29.254 800.0 134460.0 25 0 19145.0 + 28561 PTRFGWKL 8 133 502.7894614274746 0 502.7899658083916 PEAK CID FTMS 0 0 0 5832 225845.984375 1.0 0 0.0 4 Unmodified _PTRFGWKL_ REV__ENST00000379284.1_1_6:13363649-13363736:-|nuORF 4.75600775471527 0.5825752635465162 3 R 1 -1 6.9897 0.0 0.0 0.69649 0.0 0.0 64.01205733522302 780.4413546197874 844.4534119550104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.69649 + + 26 + 1 2.575 86067.0 0.8100000023841858 998 4836 5832 HBL1_DMSO_200M_050219_1,5836 HBL1_DMSO_200M_050219_1,5836,PTRFGWKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5837 29.267 800.0 106640.0 25 0 9589.8 42039 VQTLEIQR 8 108 493.78489033396806 0 493.7852966189384 PEAK CID FTMS 0 0 0 5832 220849.96875 1.0 0 0.0 5 Unmodified _VQTLEIQR_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 7.910154910731844 0.5650536163073903 3 T{M(Oxidation (M))|F} 2 7 15.217 0.0 0.0 1.544 0.0 0.0 245.13557815131907 489.2779944783502 734.4135726296693 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F} 1.544 - 98 + 1 2.575 69022.2 0.8100000023841858 999 4836 5832 HBL1_DMSO_200M_050219_1,5837 HBL1_DMSO_200M_050219_1,5837,VQTLEIQR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5838 29.276 497.0 170170.0 25 0 9338.3 38124 TPLYFFISV 9 138 362.86841124744166 1085.583404342525 3 362.8678466677666 MULTI CID FTMS 0 0 0 5832 171045.5 0.0249228126523793 67 -1.4801712036132812 6 Unmodified _TPLYFFISV_ ENSG00000180433|ENST00000641861|OR6K6;nc|ENSG00000180433|Q8NGW6|OR6K6 23.1484247019978 0.2366544122328345 3 KYV{[SA]|[TG]}SV 7 6 19.827 0.0 0.0 1.8264 0.0 0.0 333.186872215375 0.0 333.186872215375 0.0 5.970634600012918 0.0 0.0 0 0.5 0.0 0.4517188504113846 0.0 KYV{[SA]|[TG]}SV 1.8264 - 365 + 1 2.575 77455.3 1.0 1000 4836 5832 HBL1_DMSO_200M_050219_1,5838 HBL1_DMSO_200M_050219_1,5838,TPLYFFISV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5840 29.293 800.0 472480.0 25 0 63025.0 12267 GRAWGAWPR 9 129 528.7771005616577 0 528.7772094607353 PEAK CID FTMS 0 0 0 5839 369169.6875 1.0 0 0.0 1 Unmodified _GRAWGAWPR_ ENST00000393203.2_1_1:117452739-117484357:+|nuORF 6.723162845929126 0.3444685223463734 3 KE 2 9 11.766 0.0 0.0 1.1147 0.0 0.0 63.99448543783246 731.3709200494749 795.3654054873074 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 KE 1.1147 - 82 + 1 2.537 289528.2 0.7799999713897705 1001 4837 5839 HBL1_DMSO_200M_050219_1,5840 HBL1_DMSO_200M_050219_1,5840,GRAWGAWPR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5841 29.295 69.0 1420800.0 25 0 253390.0 38429 TRQPPPPPT 9 90 330.85147804053094 0 330.8514587283134 PEAK CID FTMS 0 0 0 5839 920726.5625 0.6379661630278025 -1 0.0521278381347656 2 Unmodified _TRQPPPPPT_ ENST00000414318.2_1_3:17349484-18486265:-|nuORF 19.256988751693697 0.2078072434435185 3 P{I|L}TT 4 7 15.976 0.0 0.0 2.4217 0.0 0.0 119.3599494438524 125.07253442935782 244.4324838732102 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5709991640913001 0.0 P{I|L}TT 2.4217 - 46 + 1 2.537 80676.2 1.0 1002 4837 5839 HBL1_DMSO_200M_050219_1,5841 HBL1_DMSO_200M_050219_1,5841,TRQPPPPPT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5842 29.304 550.0 130140.0 25 0 6137.4 + 11643 GLASPLSPPHC 11 106 539.7691922508824 0 539.7690917849541 PEAK CID FTMS 0 0 0 5839 419277.84375 1.0 0 0.0 3 Unmodified _GLASPLSPPHC_ REV__ENST00000553080.1_1_16:715570-716730:+|nuORF 2.735195868890462 0.4761840153648598 3 R 1 -1 5.4846 0.0 0.0 0.509 0.0 0.0 152.0808951122031 766.3163546197874 918.3972497319904 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.509 - 7 + 1 2.537 56594.2 1.0 1003 4837 5839 HBL1_DMSO_200M_050219_1,5842 HBL1_DMSO_200M_050219_1,5842,GLASPLSPPHC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5843 29.315 615.0 154560.0 25 0 16683.0 -1 ECMFETPEK 9 98 585.7440063357353 0 585.7440063357353 PEAK CID FTMS 0 0 0 -1 0 4 Carbamidomethyl (C) _EC(Carbamidomethyl (C))MFETPEK_ ENSG00000105287|ENST00000291281|PRKD2;ENST00000597589.5_1_19:47177782-47200527:-|nuORF;ENST00000599019.5_1_19:47177782-47200527:-|nuORF;nc|ENSG00000105287|Q9BZL6-2|PRKD2;nc|ENSG00000105287|Q9BZL6-3|PRKD2 3.5964929083625545 0.3444685223463734 3 N{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}{I|L}Q 8 -1 12.087 0.0 0.0 1.0336 0.0 0.0 96.97805065799557 80.01505457095936 176.9931052289549 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.4247425010840047 N{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}{I|L}Q 1.0336 - 108 + 1 2.537 78032.0 1.0 1004 4837 5839 HBL1_DMSO_200M_050219_1,5843 HBL1_DMSO_200M_050219_1,5843,ECMFETPEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5844 29.327 663.0 425270.0 25 0 99363.0 -1 EIFMSKCAK 9 125 536.760814837791 0 536.7618286013603 PEAK CID FTMS 0 0 0 5839 319163.3125 0.8440747519794987 -2 0.1006546020507812 5 Oxidation (M) _EIFM(Oxidation (M))SKCAK_ nc|ENSG00000281708|O76042|ERC2-IT1 10.073929032068715 0.3114232490637051 3 RGQ 3 -1 10.463 0.0 0.0 0.97644 0.0 0.0 196.07590352993776 531.2218111627561 727.297714692694 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 RGQ 0.97644 - 111 + 1 2.537 214625.5 1.0 1005 4837 5839 HBL1_DMSO_200M_050219_1,5844 HBL1_DMSO_200M_050219_1,5844,EIFMSKCAK False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 5845 29.34 800.0 374980.0 25 0 70666.0 -1 0 225 320.6924565595777 0 320.6919738650322 PEAK CID FTMS 0 0 0 5839 243729.015625 0.6371416882489765 -1 0.0521278381347656 6 3 T 1 -1 7.7423 0.0 0.0 1.2109 0.0 0.0 210.1357309497592 325.1640108680287 535.2997418177879 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T 1.2109 - 17 + 1 2.537 239651.4 0.9300000071525574 1006 4837 5839 HBL1_DMSO_200M_050219_1,5845 HBL1_DMSO_200M_050219_1,5845, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5846 29.345 268.0 164260.0 25 0 5367.2 + -1 DLYFTDME 8 96 525.2106474024843 0 525.2109252810478 PEAK CID FTMS 0 0 0 5839 209925.390625 1.0 0 0.0 7 Oxidation (M) _DLYFTDM(Oxidation (M))E_ REV__CON__ENSEMBL:ENSBTAP00000013050 9.347437153973935 0.5488964601725408 3 STHE 4 -1 24.451 0.0 0.0 2.3323 0.0 0.0 210.0977341586809 381.1023653619751 591.200099520656 0.0 0.0 0.0 0.0 0 0.9749073637206092 0.0 0.0 0.0 STHE 2.3323 - 23 + 1 2.537 38697.3 1.0 1007 4837 5839 HBL1_DMSO_200M_050219_1,5846 HBL1_DMSO_200M_050219_1,5846,DLYFTDME False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5847 29.36 800.0 232920.0 25 0 28438.0 -1 LDADYIERC 9 128 577.7605468630791 0 577.7605468630791 PEAK CID FTMS 0 0 0 -1 0 8 Carbamidomethyl (C) _LDADYIERC(Carbamidomethyl (C))_ ENSG00000103184|ENST00000251170|SEC14L5 3.944395688203298 0.3444685223463734 3 N 1 -1 6.9897 0.0 0.0 0.60595 0.0 0.0 463.1120228259643 573.3168407972998 1036.428863623264 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.60595 - 32 + 1 2.537 140843.8 0.9300000071525574 1008 4837 5839 HBL1_DMSO_200M_050219_1,5847 HBL1_DMSO_200M_050219_1,5847,LDADYIERC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5848 29.374 800.0 218540.0 25 0 8143.8 + 3481 CHQDQLSASV 10 230 363.16489214357375 1086.4728470309212 3 363.1648742556572 MULTI CID FTMS 0 0 0 5839 177115.84375 0.8157014528022585 -5 0.1493968963623047 9 Unmodified _CHQDQLSASV_ REV__ENSG00000120088|ENST00000314537|CRHR1;REV__ENST00000582766.5_1_17:43884387-43907895:+|nuORF;REV__nc|ENSG00000263715|P34998-1|CRHR1;REV__nc|ENSG00000263715|P34998-3|CRHR1;REV__nc|ENSG00000263715|P34998-4|CRHR1 6.723162845929126 0.6955379296933136 3 TPKSN 5 -1 17.172 0.0 0.0 1.5805 0.0 0.0 117.9654552017442 438.21454797916255 556.1800031809067 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1421590589602533 0.0 TPKSN 1.5805 - 704 + 1 2.537 144707.1 1.0 1009 4837 5839 HBL1_DMSO_200M_050219_1,5848 HBL1_DMSO_200M_050219_1,5848,CHQDQLSASV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5850 29.378 0.27 187810000.0 25 0 31833000.0 + -1 IQRLETMK 8 66 517.7865055958047 1033.5584582584092 2 517.7872802615166 MULTI CID FTMS 0 0 0 5849 232915184.0 0.9565984148690304 -8 0.2647972106933594 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 TT[{I|L}P]AE{M(Oxidation (M))|F}K 8 -1 43.409 0.0 0.0 4.2 0.0 0.0 128.09549147773595 0.0 128.09549147773595 0.0 24.42979712652913 0.0 0.0 0 0.5 0.0 0.805462187404089 0.0 TT[{I|L}P]AE{M(Oxidation (M))|F}K 4.2 - 110 1 2.453 48688.4 1.0 1010 4838 5849 HBL1_DMSO_200M_050219_1,5850 HBL1_DMSO_200M_050219_1,5850,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5851 29.379 1.4 37953000.0 25 0 2563300.0 8072 EPAPLPAPSR 10 87 345.52710717968927 1033.5594921392678 3 345.5270263552666 MULTI CID FTMS 0 0 0 5849 49879528.0 1.0 0 0.0 2 Unmodified _EPAPLPAPSR_ ENST00000473880.5_1_7:102112857-102113139:+|nuORF 18.1463463914782 0.5430639438673815 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 28.464 18.655 4.3462 2.754 2.754 49.733 0.0 0.0 0.0 0.0 15.747657806594326 0.0 0.0 0 0.5 0.0 0.6203715150305281 0.2134679910804404 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.754 - 151 + 1 2.453 54647.5 1.0 1011 4838 5849 HBL1_DMSO_200M_050219_1,5851 HBL1_DMSO_200M_050219_1,5851,EPAPLPAPSR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5852 29.381 38.0 1434700.0 25 0 124210.0 + 44949 YPQFEQSE 8 90 514.2207520317689 1026.4269511303378 2 514.2206909060478 MULTI CID FTMS 0 0 0 5849 2179746.75 0.4270190159163384 1 -0.0173454284667968 3 Unmodified _YPQFEQSE_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3 30.63653989081413 0.3996269429323407 3 {M(Oxidation (M))|F}DQT[HT]DV 8 7 58.141 0.0 0.0 5.6644 0.0 0.0 0.0 80.01500879459218 80.01500879459218 32.72283485483939 0.0 0.0 0.0 0 0.5 2.0 0.8807196863200843 0.0 {M(Oxidation (M))|F}DQT[HT]DV 5.6644 - 512 + 1 2.453 45702.3 1.0 1012 4838 5849 HBL1_DMSO_200M_050219_1,5852 HBL1_DMSO_200M_050219_1,5852,YPQFEQSE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5853 29.392 625.0 45211.0 25 0 4129.7 -1 CCKKFQDWYYK 11 56 784.8562499880791 0 784.8562499880791 PEAK CID FTMS 0 0 0 -1 0 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))CKKFQDWYYK_ ENSG00000121741|ENST00000610343|ZMYM2 0.3070304955306653 0.4761840153648598 3 Y 1 -1 3.9794 0.0 0.0 0.25384 0.0 0.0 1222.4851917712767 179.12046228580314 1401.6056540570798 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.25384 + + 1 + 1 2.453 24819.4 1.0 1013 4838 5849 HBL1_DMSO_200M_050219_1,5853 HBL1_DMSO_200M_050219_1,5853,CCKKFQDWYYK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5855 29.406 720.0 200580.0 25 0 16455.0 -1 ICSYKCFTQR 10 129 454.88211416275686 1361.6245130884706 3 454.8831664919853 MULTI CID FTMS 0 0 0 5854 223395.609375 1.0 0 0.0 1 2 Carbamidomethyl (C) _IC(Carbamidomethyl (C))SYKC(Carbamidomethyl (C))FTQR_ ENSG00000214954|ENST00000448384|LRRC69;nc|ENSG00000214954|Q6ZNQ3-2|LRRC69 7.477065608646677 0.69205068831198 3 {[RE]|[WV]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 -1 {[RE]|[WV]}HQ + + 64.761 31.471 5.7193 4.7561 4.7561 54.833 0.0 0.0 0.0 0.0 43.76078152608656 0.0 0.0 0 1.7302046884880935 0.0 0.6747425010840047 0.9731975075880328 {[RE]|[WV]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 4.7561 - 551 + 1 2.453 118662.0 1.0 1014 4839 5854 HBL1_DMSO_200M_050219_1,5855 HBL1_DMSO_200M_050219_1,5855,ICSYKCFTQR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5856 29.407 54.0 731540.0 25 0 109800.0 27622 PLFPMENQP 9 62 358.17574093044607 0 358.1757385134697 PEAK CID FTMS 0 0 0 5854 2070754.375 1.0 0 0.0 2 Unmodified _PLFPMENQP_ ENSG00000189108|ENST00000372582|IL1RAPL2 1.1933415558491238 0.3444685223463735 3 T 1 9 4.3361 0.0 0.0 0.60701 0.0 0.0 356.31599152113233 253.9444979303344 610.2604894514667 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 T 0.60701 - 1 + 1 2.453 39373.9 1.0 1015 4839 5854 HBL1_DMSO_200M_050219_1,5856 HBL1_DMSO_200M_050219_1,5856,PLFPMENQP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5857 29.418 609.0 122770.0 25 0 8870.3 + -1 SSDASQCYY 9 114 533.1929199099541 0 533.1929199099541 PEAK CID FTMS 0 0 0 -1 0 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SSDASQCYY_ REV__nc|ENSG00000211659|P01717|IGLV3-25 10.073929032068715 0.3114232490637051 3 S 1 -1 8.4113 0.0 0.0 0.79026 0.0 0.0 129.04116922684312 845.2723710239676 974.3135402508108 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 S 0.79026 + + 6 + 1 2.453 62200.6 1.0 1016 4839 5854 HBL1_DMSO_200M_050219_1,5857 HBL1_DMSO_200M_050219_1,5857,SSDASQCYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5858 29.429 645.0 142880.0 25 0 7567.1 2611 ASPSPSGSVL 10 163 451.2346360397361 0 451.2353088259697 PEAK CID FTMS 0 0 0 5854 245747.9375 1.0 0 0.0 4 Unmodified _ASPSPSGSVL_ ENSG00000160194|ENST00000354250|NDUFV3 43.85829265575387 0.0827756760151878 3 ASP[{M(Oxidation (M))|F}V]KD 7 7 33.892 0.0 0.0 3.7639 0.0 0.0 87.03106037643188 66.0357912652953 153.06685164172717 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 1.0189301784845295 0.0 ASP[{M(Oxidation (M))|F}V]KD 3.7639 - 711 + 1 2.453 74835.2 1.0 1017 4839 5854 HBL1_DMSO_200M_050219_1,5858 HBL1_DMSO_200M_050219_1,5858,ASPSPSGSVL True False GTSPPSVEK 29.42914 451.23530882597 1212542.125 5854.0 ENSG00000181143|ENST00000397910|MUC16 2.821669340133667 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5860 29.433 33.0 1376900.0 25 0 258240.0 + 45135 YQDPQGRHV 9 71 367.18116905571503 1098.5216777673452 3 367.1808044314384 MULTI CID FTMS 0 0 0 5859 1386702.5 0.4615486515319787 2 -0.0268974304199218 1 Unmodified _YQDPQGRHV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 24.020572477871973 0.2255576514309169 3 {[QD]|[EN]|[WG]|[KD]|[RS]}YPQGRHV 9 2 {[QD]|[EN]|[WG]|[KD]|[RS]}Y + + 21.279 10.304 2.537 1.937 1.937 48.777 0.0 0.0 0.0 0.0 10.974957548135787 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3807196863200844 {[QD]|[EN]|[WG]|[KD]|[RS]}YPQGRHV 1.937 - 56 + 1 2.453 42910.6 1.0 1018 4840 5859 HBL1_DMSO_200M_050219_1,5860 HBL1_DMSO_200M_050219_1,5860,YQDPQGRHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5861 29.435 56.0 1634000.0 25 0 397660.0 -1 0 86 303.1704047339895 604.3262565347791 2 303.1698486208916 MULTI CID FTMS 0 0 0 5859 1548640.0 0.7058391342732429 2 -0.0268974304199218 2 3 P{I|L}T{M(Oxidation (M))|F}K 5 -1 + 68.321 0.0 0.0 11.305 11.305 97.004 0.0 0.0 0.0 34.51544993495972 12.907389305833815 12.907389305833815 12.907389305833815 0 0.7614393726401688 2.0 0.3494850021680094 0.3054621874040891 P{I|L}T{M(Oxidation (M))|F}K;P{I|L}TK{M(Oxidation (M))|F};P{I|L}KT{M(Oxidation (M))|F};[KT]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P;K[{I|L}P]T{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T][K{I|L}]P;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{I|L}T]P;[{I|L}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P 11.305;9.1694;7.7572;1.1151;1.0463;0.44282;0.23608;0.23608 -;-;-;-;-;-;-;- 156 + 1 2.453 78306.3 1.0 1019 4840 5859 HBL1_DMSO_200M_050219_1,5861 HBL1_DMSO_200M_050219_1,5861, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5863 29.444 407.0 503930.0 25 0 81050.0 + 32428 SAARYRKQSS 10 175 385.2071275653602 0 385.2065612673759 PEAK CID FTMS 0 0 0 5862 448546.40625 0.8255070114251187 -5 0.2106475830078125 1 Unmodified _SAARYRKQSS_ REV__ENSG00000097021|ENST00000361521|ACOT7;REV__ENST00000377860.8_1_1:6324659-6342844:-|nuORF;REV__nc|ENSG00000097021|O00154-4|ACOT7;REV__nc|ENSG00000097021|O00154-5|ACOT7;REV__nc|ENSG00000097021|O00154-6|ACOT7;REV__nc|ENSG00000097021|O00154|ACOT7 6.2057823575117 0.3961065659209838 3 QT 2 -1 4.3959 0.0 0.0 0.57208 0.0 0.0 428.2163562778301 108.0573748224242 536.2737311002543 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 QT 0.57208 - 27 + 1 2.453 159355.4 1.0 1020 4841 5862 HBL1_DMSO_200M_050219_1,5863 HBL1_DMSO_200M_050219_1,5863,SAARYRKQSS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5864 29.456 709.0 144200.0 25 0 24145.0 -1 0 46 1121.1268844075569 3360.358823822871 3 1121.459155261517 MULTI CID FTMS 0 0 0 5862 284363.71875 0.6506136745830188 -6 0.2591743469238281 2 3 E 1 -1 6.9897 0.0 0.0 0.208 0.0 0.0 2704.129100777752 524.1629732721311 3228.2920740498835 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.208 - 38 + 1 2.453 83191.5 1.0 1021 4841 5862 HBL1_DMSO_200M_050219_1,5864 HBL1_DMSO_200M_050219_1,5864, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5866 29.461 66.0 197700.0 25 0 22638.0 35160 SRPRFPYP 8 35 510.27496211299086 1018.5353712927816 2 510.2750427126884 MULTI CID FTMS 0 0 0 5865 821710.9375 0.6543211836550085 -3 0.0644493103027343 1 Unmodified _SRPRFPYP_ ENST00000255890.8_1_22:23742726-23744040:-|nuORF 0.7936320650641473 0.8195151834710337 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.374 18576.4 1.0 1022 4842 5865 HBL1_DMSO_200M_050219_1,5866 HBL1_DMSO_200M_050219_1,5866,SRPRFPYP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5867 29.47 534.0 211790.0 25 0 21370.0 + 45134 YQDPQGRHV 9 118 550.2678611435208 1098.5211693538415 2 550.2675659060478 MULTI CID FTMS 0 0 0 5865 273419.46875 0.4778858617511198 5 -0.1058635711669921 2 Unmodified _YQDPQGRHV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 56.17704186161178 0.0281986971544335 3 P{I|L}[QT]AVDC(Carbamidomethyl (C)){I|L} 9 9 49.579 0.0 0.0 4.5132 0.0 0.0 83.03795821357578 0.0 83.03795821357578 0.0 36.54988735588192 0.0 0.0 0 1.3807196863200843 0.0 1.0451140161145327 0.805462187404089 P{I|L}[QT]AVDC(Carbamidomethyl (C)){I|L} 4.5132 - 429 1 2.374 94449.7 1.0 1023 4842 5865 HBL1_DMSO_200M_050219_1,5867 HBL1_DMSO_200M_050219_1,5867,YQDPQGRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5869 29.48 440.0 265730.0 25 0 36466.0 + 26128 NPSMPQRTV 9 126 523.2579096277078 1044.5012663222155 2 523.2604247927666 MULTI CID FTMS 0 0 0 5868 521104.125 1.0 0 0.0 1 Oxidation (M) _NPSM(Oxidation (M))PQRTV_ ENSG00000197943|ENST00000564138|PLCG2 63.22749603027936 0.0242951379232427 3 NPS{M(Oxidation (M))|F}PQRTV 9 0 + 75.889 0.0 0.0 7.2655 7.2655 91.496 0.0 0.0 0.0 46.96063146421345 9.698274346512363 9.698274346512363 9.208187539523747 0 1.110924374808178 1.6989700043360187 0.4247425010840047 0.0 + + NPS{M(Oxidation (M))|F}PQRTV;NPS{M(Oxidation (M))|F}P[AG]RTV;[NP]S[KP][{M(Oxidation (M))|F}V]PC(Carbamidomethyl (C));[PS]N[KP][{M(Oxidation (M))|F}V]PC(Carbamidomethyl (C));[QP]R{[TV]|[{I|L}S]}TSPC(Carbamidomethyl (C)) 7.2655;6.3839;3.8625;1.3169;1.079 +;-;-;-;- + 231 + 1 2.374 97544.9 1.0 1024 4843 5868 HBL1_DMSO_200M_050219_1,5869 HBL1_DMSO_200M_050219_1,5869,NPSMPQRTV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5870 29.483 178.0 1442800.0 25 0 516100.0 10785 FYPWTIDNK 9 83 395.1964895945456 1182.5676393838366 3 395.1962768435478 MULTI CID FTMS 0 0 0 5868 540112.4375 0.7985879579338953 -3 0.0410270690917968 2 Unmodified _FYPWTIDNK_ ENSG00000103591|ENST00000261880|AAGAB;ENST00000558725.5_1_15:67519241-67546969:-|nuORF 14.838274106304384 0.4350285940865338 3 KT{M(Oxidation (M))|F}K 4 7 33.589 0.0 0.0 2.8403 0.0 0.0 660.2872571590304 0.0 660.2872571590304 0.0 5.7532869556738255 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.2614393726401688 KT{M(Oxidation (M))|F}K 2.8403 - 78 + 1 2.374 203599.3 1.0 1025 4843 5868 HBL1_DMSO_200M_050219_1,5870 HBL1_DMSO_200M_050219_1,5870,FYPWTIDNK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5872 29.487 34.0 1274100.0 25 0 161280.0 + 2780 ATRTPWTLA 9 76 339.5237192688679 1015.549328406804 3 339.5234863162041 MULTI CID FTMS 0 0 0 5871 2065081.0 0.7854493326129544 2 -0.0539112091064453 1 Unmodified _ATRTPWTLA_ REV__ENST00000292539.8_1_8:145722821-145724209:+|nuORF 9.38312468134398 0.5871240394367778 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]P{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]P + + 16.362 -3.0373 -0.59757 1.6112 1.6112 48.584 0.0 0.0 0.0 0.0 1.8985104929812733 0.0 0.0 0 0.0 0.0 0.7302046884880938 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]P{I|L}T{M(Oxidation (M))|F}K 1.6112 - 96 + 1 2.374 43119.3 1.0 1026 4844 5871 HBL1_DMSO_200M_050219_1,5872 HBL1_DMSO_200M_050219_1,5872,ATRTPWTLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5873 29.49 106.0 318120.0 25 0 24120.0 6221 DTNADKQL 8 79 452.72196935299866 903.4293857727972 2 452.7219116091728 MULTI CID FTMS 0 0 0 5871 324781.0 0.1768248567246274 -7 0.207193374633789 2 Unmodified _DTNADKQL_ ENSG00000163220|ENST00000368738|S100A9 34.10243960390752 0.3329570729325616 3 {[QG]|[NA]}DTDKQ{I|L} 8 4 {[QG]|[NA]}DT + + 21.26 14.693 3.6626 2.3533 2.3533 49.221 0.0 0.0 0.0 0.0 6.567591625658977 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3252574989159953 {[QG]|[NA]}DTDKQ{I|L} 2.3533 - 48 + 1 2.374 35269.3 1.0 1027 4844 5871 HBL1_DMSO_200M_050219_1,5873 HBL1_DMSO_200M_050219_1,5873,DTNADKQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5874 29.502 713.0 84856.0 25 0 15305.0 -1 0 30 1112.771093863223 3335.291452189869 3 1113.103686511517 MULTI CID FTMS 0 0 0 5871 239990.484375 1.0 0 0.0 3 3 P{M(Oxidation (M))|F} 2 -1 9.464 0.0 0.0 0.28375 0.0 0.0 1903.6488263127192 1184.5198860390935 3088.1687123518127 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F} 0.28375 - 5 + 1 2.374 58031.4 1.0 1028 4844 5871 HBL1_DMSO_200M_050219_1,5874 HBL1_DMSO_200M_050219_1,5874, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5876 29.513 479.0 358800.0 25 0 15511.0 -1 GRFLCCMLE 9 141 544.2427025631791 1086.4708521931582 2 544.2424194216728 MULTI CID FTMS 0 0 0 5875 479307.625 1.0 0 0.0 1 Oxidation (M) _GRFLCCM(Oxidation (M))LE_ ENSG00000125676|ENST00000245838|THOC2 11.640296217721598 0.521594087909532 3 GCKAS 5 -1 16.823 0.0 0.0 1.5484 0.0 0.0 622.2664393627152 0.0 622.2664393627152 0.0 5.402597984099433 0.0 0.0 0 0.0 0.0 0.0 0.0 GCKAS 1.5484 - 395 1 2.374 133121.7 1.0 1029 4845 5875 HBL1_DMSO_200M_050219_1,5876 HBL1_DMSO_200M_050219_1,5876,GRFLCCMLE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5877 29.523 612.0 173730.0 25 0 13180.0 + -1 SCTGWPCCSGK 11 123 593.2277246726094 0 593.2264282107353 PEAK CID FTMS 0 0 0 5875 241202.1875 1.0 0 0.0 2 Carbamidomethyl (C) _SC(Carbamidomethyl (C))TGWPCCSGK_ REV__ENST00000429149.6_1_16:70680464-70680746:+|nuORF 2.498486711656943 0.4761840153648598 3 VQA 3 -1 9.0411 0.0 0.0 0.76332 0.0 0.0 293.0398293737153 590.2105806940061 883.2504100677215 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VQA 0.76332 - 74 + 1 2.374 81791.8 1.0 1030 4845 5875 HBL1_DMSO_200M_050219_1,5877 HBL1_DMSO_200M_050219_1,5877,SCTGWPCCSGK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5878 29.537 800.0 78670.0 25 0 14297.0 -1 0 32 1112.771093863223 3335.291452189869 3 1112.771777331829 MULTI CID FTMS 0 0 0 5875 81630.765625 0.3401416761901562 1 -0.0348548889160156 3 3 GYW 3 -1 10.802 0.0 0.0 0.32387 0.0 0.0 1944.6728741642817 981.4454489926012 2926.118323156883 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYW 0.32387 - 11 + 1 2.374 56462.9 0.9399999976158142 1031 4845 5875 HBL1_DMSO_200M_050219_1,5878 HBL1_DMSO_200M_050219_1,5878, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5880 29.55 554.0 496650.0 25 0 51458.0 + 29668 QPAGGGTDISR 11 129 529.7655574602779 1057.5165619873558 2 529.7643920779228 MULTI CID FTMS 0 0 0 5879 368169.46875 1.0 0 0.0 1 Unmodified _QPAGGGTDISR_ REV__ENSG00000049246|ENST00000377532|PER3;REV__nc|ENSG00000049246|P56645|PER3 7.608950283845883 0.8392484121837455 3 QRN 3 -1 24.693 0.0 0.0 2.335 0.0 0.0 641.2800160138687 0.0 641.2800160138687 0.0 10.713337517843655 0.0 0.0 0 0.0 0.0 0.0 0.0 QRN 2.335 - 424 1 2.299 208389.4 1.0 1032 4846 5879 HBL1_DMSO_200M_050219_1,5880 HBL1_DMSO_200M_050219_1,5880,QPAGGGTDISR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5881 29.562 674.0 52528.0 25 0 6210.4 + -1 EYGLFLCVCEL 11 46 701.8243896365166 0 701.8243896365166 PEAK CID FTMS 0 0 0 -1 0 2 2 Carbamidomethyl (C) _EYGLFLC(Carbamidomethyl (C))VC(Carbamidomethyl (C))EL_ REV__ENST00000354989.9_1_20:25206534-25206930:+|nuORF 1.1933415558491238 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.299 34637.6 1.0 1033 4846 5879 HBL1_DMSO_200M_050219_1,5881 HBL1_DMSO_200M_050219_1,5881,EYGLFLCVCEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5883 29.566 63.0 1225200.0 25 0 214910.0 38430 TRQPPPPPT 9 80 330.85147804053094 0 330.8512145876884 PEAK CID FTMS 0 0 0 5882 932842.8125 0.6463614432745214 9 -0.2956352233886719 1 Unmodified _TRQPPPPPT_ ENST00000414318.2_1_3:17349484-18486265:-|nuORF 19.256988751693697 0.2078072434435185 3 P{I|L}T 3 7 13.984 0.0 0.0 2.1199 0.0 0.0 55.36059346473366 290.1185091608032 345.4791026255368 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 P{I|L}T 2.1199 - 35 + 1 2.299 70958.2 1.0 1034 4847 5882 HBL1_DMSO_200M_050219_1,5883 HBL1_DMSO_200M_050219_1,5883,TRQPPPPPT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5884 29.58 800.0 72068.0 25 0 13061.0 -1 0 36 1067.1029636903688 3198.2870616713067 3 1067.103198230267 MULTI CID FTMS 0 0 0 5882 120628.4765625 1.0 0 0.0 2 3 C(Carbamidomethyl (C)){M(Oxidation (M))|F} 2 -1 4.6927 0.0 0.0 0.14673 0.0 0.0 1313.468560064894 1574.6878145807252 2888.1563746456195 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){M(Oxidation (M))|F} 0.14673 - 12 + 1 2.299 54948.4 0.8999999761581421 1035 4847 5882 HBL1_DMSO_200M_050219_1,5884 HBL1_DMSO_200M_050219_1,5884, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5885 29.593 729.0 105530.0 25 0 11453.0 4703 DDQGMTPLMY 10 81 585.7461009664689 0 585.7459594607353 PEAK CID FTMS 0 0 0 5882 108571.4765625 1.0 0 0.0 3 Unmodified _DDQGMTPLMY_ ENSG00000166016|ENST00000435224|ABTB2;nc|ENSG00000166016|Q8N961-2|ABTB2 3.5964929083625545 0.3961065659209837 3 {I|L} 1 9 6.9897 0.0 0.0 0.59768 0.0 0.0 845.2963268335253 208.07357202701408 1053.3698988605397 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.59768 + + 17 + 1 2.299 64283.4 1.0 1036 4847 5882 HBL1_DMSO_200M_050219_1,5885 HBL1_DMSO_200M_050219_1,5885,DDQGMTPLMY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5887 29.611 774.0 317700.0 25 0 48729.0 -1 0 224 320.6924565595777 0 320.6924316287041 PEAK CID FTMS 0 0 0 5886 214403.140625 0.5604797550812544 10 -0.2982921600341797 1 3 T 1 -1 7.901 0.0 0.0 1.2357 0.0 0.0 210.135667726971 325.1639039702723 535.2995716972433 0.0 0.0 0.0 0.0 0 0.055462187404089 0.0 0.4247425010840047 0.0 T 1.2357 - 6 + 1 2.299 192145.0 1.0 1037 4848 5886 HBL1_DMSO_200M_050219_1,5887 HBL1_DMSO_200M_050219_1,5887, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5888 29.624 788.0 154590.0 25 0 8236.4 5712 DPKTGIPR 8 156 442.2531990325167 882.4918451318334 2 442.2532226443291 MULTI CID FTMS 0 0 0 5886 168077.109375 1.0 0 0.0 2 Unmodified _DPKTGIPR_ ENSG00000148737|ENST00000355995|TCF7L2;ENSG00000152284|ENST00000282111|TCF7L1;nc|ENSG00000148737|Q9NQB0-10|TCF7L2;nc|ENSG00000148737|Q9NQB0-11|TCF7L2;nc|ENSG00000148737|Q9NQB0-12|TCF7L2;nc|ENSG00000148737|Q9NQB0-13|TCF7L2;nc|ENSG00000148737|Q9NQB0-14|TCF7L2;nc|ENSG00000148737|Q9NQB0-15|TCF7L2;nc|ENSG00000148737|Q9NQB0-16|TCF7L2;nc|ENSG00000148737|Q9NQB0-2|TCF7L2;nc|ENSG00000148737|Q9NQB0-3|TCF7L2;nc|ENSG00000148737|Q9NQB0-4|TCF7L2;nc|ENSG00000148737|Q9NQB0-5|TCF7L2;nc|ENSG00000148737|Q9NQB0-6|TCF7L2;nc|ENSG00000148737|Q9NQB0-7|TCF7L2;nc|ENSG00000148737|Q9NQB0-8|TCF7L2;nc|ENSG00000148737|Q9NQB0-9|TCF7L2 14.838274106304384 0.6917062315640577 3 DPAP 4 5 49.157 0.0 0.0 5.5702 0.0 0.0 0.0 499.30109583072505 499.30109583072505 32.1669877129645 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 DPAP 5.5702 - 105 + 1 2.299 98375.5 1.0 1038 4848 5886 HBL1_DMSO_200M_050219_1,5888 HBL1_DMSO_200M_050219_1,5888,DPKTGIPR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5889 29.637 754.0 236910.0 25 0 43461.0 -1 EIFMSKCAK 9 112 536.760814837791 0 536.7612182497978 PEAK CID FTMS 0 0 0 5886 156070.25 0.4127509409783066 9 -0.2683639526367187 3 Oxidation (M) _EIFM(Oxidation (M))SKCAK_ nc|ENSG00000281708|O76042|ERC2-IT1 14.838274106304384 0.2567717476666951 3 T 1 -1 9.4897 0.0 0.0 0.88564 0.0 0.0 842.3639931015601 125.07261072330311 967.4366038248633 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 T 0.88564 - 19 + 1 2.299 140946.7 1.0 1039 4848 5886 HBL1_DMSO_200M_050219_1,5889 HBL1_DMSO_200M_050219_1,5889,EIFMSKCAK False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 5891 29.641 0.46 93206000.0 25 0 17381000.0 + -1 IQRLETMK 8 55 517.7865055958047 1033.5584582584092 2 517.7873412966728 MULTI CID FTMS 0 0 0 5890 111532464.0 0.4580713736071291 3 -0.1301460266113281 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 3 QT{M(Oxidation (M))|F}K 4 -1 34.271 0.0 0.0 3.3158 0.0 0.0 511.3189695882905 0.0 511.3189695882905 0.0 23.30198135264581 0.0 0.0 0 1.0 0.0 0.0 0.25 QT{M(Oxidation (M))|F}K 3.3158 - 38 + 1 2.271 40943.1 1.0 1040 4849 5890 HBL1_DMSO_200M_050219_1,5891 HBL1_DMSO_200M_050219_1,5891,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5892 29.643 2.2 18557000.0 25 0 1232300.0 + 38389 TRATPSAAFL 10 74 345.52710717968927 1033.5594921392678 3 345.5269958376884 MULTI CID FTMS 0 0 0 5890 20507854.0 0.411147715752242 11 -0.3028850555419922 2 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 15.248480904072842 0.5916873121453583 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 23.933 15.234 3.5491 2.3156 2.3156 49.144 0.0 0.0 0.0 0.0 11.542294029923 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.3156 - 55 + 1 2.271 43066.9 1.0 1041 4849 5890 HBL1_DMSO_200M_050219_1,5892 HBL1_DMSO_200M_050219_1,5892,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5893 29.646 158.0 575160.0 25 0 58739.0 + 24714 MPATETKKV 9 115 335.51993622684506 1003.5379792807352 3 335.5193359255791 MULTI CID FTMS 0 0 0 5890 589762.8125 0.7786477090917853 -1 0.0444889068603515 3 Unmodified _MPATETKKV_ ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2 23.78978130925829 0.2284941198415988 3 MPATETKKV 9 0 + 53.85 0.0 0.0 5.3661 5.3661 76.295 0.0 0.0 0.0 16.478174818886373 1.6633142176652456 1.6633142176652456 1.6633142176652456 0 0.0 0.0 0.7742275032520141 0.5709991640913001 + + MPATETKKV;MPATETKVK;[KT]{[ET]|[MV]}KAPVM;[KT]{[ET]|[MV]}KAVPM;[KT]{[ET]|[MV]}AKPVM;{[ET]|[MV]}[KT]KAPVM;[KT]{[ET]|[MV]}AKVPM;{[ET]|[MV]}[KT]KAVPM;{[ET]|[MV]}[KT]AKPVM;M[{I|L}T]AK[KT][DP] 5.3661;5.2003;3.3834;3.0835;2.908;2.769;2.608;2.4691;2.2936;2.2237 +;-;-;-;-;-;-;-;-;- + 608 + 1 2.271 77469.7 1.0 1042 4849 5890 HBL1_DMSO_200M_050219_1,5893 HBL1_DMSO_200M_050219_1,5893,MPATETKKV False True MPATETKKV 29.645728 335.519335925579 4288827.75 5890.0 ENSG00000102316|ENST00000375068|MAGED2;;nc|ENSG00000102316|Q9UNF1-2|MAGED2 6.722683270772298 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5894 29.658 712.0 271890.0 25 0 18178.0 + 24715 MPATETKKV 9 149 502.77626948882346 1003.5379860444468 2 502.7763244509697 MULTI CID FTMS 0 0 0 5890 189339.71875 0.6724826537070133 -2 0.075479507446289 4 Unmodified _MPATETKKV_ ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2 63.960520009940105 0.0238892913700936 3 MPATETKVK 9 2 + 74.082 0.0 0.0 7.3821 7.3821 81.675 0.0 0.0 0.0 30.45757490560676 1.1197375944393286 1.1197375944393286 1.1197375944393286 0 0.9802046884880936 1.3979400086720375 1.4049471895720984 0.2215141619232908 MPATETKVK;MPATETKKV;[PA]TETKKVM;MVS[DP]TKVK;[TP]AETKKVM;MVST[DP]KVK;MVS[DP]TKKV;[TA]PETKKVM;MVST[DP]KKV;{[QD]|[EN]|[WG]|[KD]|[RS]}QQKKVM 7.3821;7.2705;4.301;3.0943;3.0655;3.0365;2.9827;2.9683;2.9249;2.7977 -;+;-;-;-;-;-;-;-;- + 2061 + 1 2.271 147062.8 1.0 1043 4849 5890 HBL1_DMSO_200M_050219_1,5894 HBL1_DMSO_200M_050219_1,5894,MPATETKKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5895 29.672 800.0 227540.0 25 0 40485.0 -1 0 120 407.1678038647376 406.1605273981376 1 407.1670104861259 MULTI CID FTMS 0 0 0 5890 132492.203125 0.3482245171714357 -3 0.1001853942871093 5 3 Y 1 -1 11.109 0.0 0.0 2.7352 0.0 0.0 225.0862456371985 0.0 225.0862456371985 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.7352 - 19 + 1 2.271 144414.2 0.9399999976158142 1044 4849 5890 HBL1_DMSO_200M_050219_1,5895 HBL1_DMSO_200M_050219_1,5895, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5897 29.688 800.0 136120.0 25 0 7424.3 + 8450 ESQTTFWE 8 142 514.2207520317689 1026.4269511303378 2 514.2204467654228 MULTI CID FTMS 0 0 0 5896 183590.515625 0.0359659402239093 13 -0.2928218841552734 1 Unmodified _ESQTTFWE_ REV__CON__Q9D646 36.04419817259434 0.3004715606373109 3 {M(Oxidation (M))|F}DQTHTDV 8 -1 49.507 0.0 0.0 4.8233 0.0 0.0 0.0 80.01500116519765 80.01500116519765 24.126888834038738 0.0 0.0 0.0 0 0.6822333069283655 2.0 0.6643943297944485 0.0 {M(Oxidation (M))|F}DQTHTDV 4.8233 - 2137 + 1 2.271 84783.2 0.8500000238418579 1045 4850 5896 HBL1_DMSO_200M_050219_1,5897 HBL1_DMSO_200M_050219_1,5897,ESQTTFWE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5898 29.691 170.0 203330.0 25 0 13813.0 -1 DAEMTTRMV 9 83 543.2334462014411 1084.452339469682 2 543.2324706912041 MULTI CID FTMS 0 0 0 5896 228939.484375 0.3580242578635881 -14 0.4480800628662109 2 2 Oxidation (M) _DAEM(Oxidation (M))TTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 27.628801355627647 0.1796483985696185 3 {[DA]|[EG]}E 3 -1 35.942 0.0 0.0 3.3143 0.0 0.0 0.0 766.3216991711071 766.3216991711071 11.42159058960253 0.0 0.0 0.0 0 0.5 2.0 0.3494850021680094 0.0 {[DA]|[EG]}E 3.3143 + + 77 1 2.271 31808.3 1.0 1046 4850 5896 HBL1_DMSO_200M_050219_1,5898 HBL1_DMSO_200M_050219_1,5898,DAEMTTRMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5899 29.705 800.0 79411.0 25 0 3902.9 -1 0 78 715.6490462121686 2143.9253092367057 3 715.9844238162041 MULTI CID FTMS 0 0 0 5896 101233.0546875 1.0 0 0.0 3 3 [PS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}C]|[YS]}QSVP 10 -1 30.115 0.0 0.0 1.4047 0.0 0.0 0.0 1020.4007940481184 1020.4007940481184 13.125234173745078 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.325257498915995 0.3807196863200844 [PS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}C]|[YS]}QSVP 1.4047 - 234 1 2.271 53654.7 0.7300000190734863 1047 4850 5896 HBL1_DMSO_200M_050219_1,5899 HBL1_DMSO_200M_050219_1,5899, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5900 29.719 800.0 24554.0 25 0 4474.5 -1 0 30 1121.123461902142 0 1121.123461902142 PEAK CID FTMS 0 0 0 -1 0 4 3 W 1 -1 6.9897 0.0 0.0 0.31201 0.0 0.0 1293.1075672595591 758.0403536432249 2051.147920902784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.31201 - 1 + 1 2.271 25743.3 0.5400000214576721 1048 4850 5896 HBL1_DMSO_200M_050219_1,5900 HBL1_DMSO_200M_050219_1,5900, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5902 29.725 154.0 390390.0 25 0 20259.0 + 32338 RYNFTSRPL 9 116 385.2071275653602 0 385.2068359255791 PEAK CID FTMS 0 0 0 5901 371137.5 0.683043279767198 5 -0.1385612487792968 1 Unmodified _RYNFTSRPL_ REV__ENSG00000120896|ENST00000240123|SORBS3;REV__ENST00000517535.5_1_8:22411983-22423386:+|nuORF 2.735195868890462 0.3444685223463735 3 H 1 -1 3.4949 0.0 0.0 0.45482 0.0 0.0 246.1531334492767 382.1681917779906 628.3213252272674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.45482 - 5 + 1 2.259 54394.1 1.0 1049 4851 5901 HBL1_DMSO_200M_050219_1,5902 HBL1_DMSO_200M_050219_1,5902,RYNFTSRPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5903 29.728 133.0 553340.0 25 0 72432.0 -1 0 108 303.1704047339895 604.3262565347791 2 303.1702453494072 MULTI CID FTMS 0 0 0 5901 331126.5 0.1509208351165725 13 -0.2497730255126953 2 3 P{I|L}T{M(Oxidation (M))|F}K 5 -1 + 55.987 0.0 0.0 9.2644 9.2644 98.922 0.0 0.0 0.0 32.7738823421749 13.04572234712534 13.04572234712534 55.52964495441181 0 0.3494850021680094 1.6989700043360187 0.3494850021680094 0.25 P{I|L}T{M(Oxidation (M))|F}K;[{M(Oxidation (M))|F}T][K{I|L}]P 9.2644;0.075717 -;- 66 + 1 2.259 63700.6 1.0 1050 4851 5901 HBL1_DMSO_200M_050219_1,5903 HBL1_DMSO_200M_050219_1,5903, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5904 29.739 670.0 312410.0 25 0 52909.0 + 3580 DAAHAQTEV 9 164 471.2198453706922 940.4251378081844 2 471.2198974490166 MULTI CID FTMS 0 0 0 5901 338603.1875 0.2221096114717288 -10 0.2843647003173828 3 Unmodified _DAAHAQTEV_ ENSG00000154174|ENST00000284320|TOMM70 56.17704186161178 0.0281986971544335 3 {[DA]|[EG]}[HA]AQTEV 9 0 + 67.603 0.0 0.0 7.1885 7.1885 80.198 0.0 0.0 0.0 0.5435766232259311 14.09256854528806 0.5435766232259311 0.5435766232259311 0 0.6549471895720985 1.6989700043360187 1.3494850021680094 0.4247425010840047 + + {[DA]|[EG]}[HA]AQTEV;[HA]ADAQTEV;{[DA]|[EG]}[HA]QATEV;[HA]ADQATEV;{[DA]|[EG]}[HA]AGATEV;[HA]ADAGATEV;[HA]AGEQTEV;[HA]QEGATEV;[HA]QEQTEV;[HA]AGEGATEV 7.1885;7.1307;6.8684;6.8106;6.7913;6.7335;6.4905;6.3577;6.309;6.0933 +;-;-;-;-;-;-;-;-;- + 2122 1 2.259 164320.1 1.0 1051 4851 5901 HBL1_DMSO_200M_050219_1,5904 HBL1_DMSO_200M_050219_1,5904,DAAHAQTEV True True DAAHAQTEV 29.739499 471.219897449017 19072664.0 5901.0 ENSG00000154174|ENST00000284320|TOMM70 9.037707964579264 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5905 29.753 800.0 66177.0 25 0 5576.4 12342 GTAPASRGFR 10 107 510.27496211299086 1018.5353712927816 2 510.2752563357353 MULTI CID FTMS 0 0 0 5901 239510.78125 0.1907203260095777 6 -0.1422805786132812 4 Unmodified _GTAPASRGFR_ ENSG00000090975|ENST00000320201|PITPNM2;nc|ENSG00000090975|Q9BZ72-2|PITPNM2;nc|ENSG00000090975|Q9BZ72-3|PITPNM2 5.731851221503515 0.7001233259664787 3 K 1 10 12.603 0.0 0.0 1.2374 0.0 0.0 872.4294885796943 0.0 872.4294885796943 0.0 1.0092710570995465 0.0 0.0 0 0.0 0.0 0.0 0.1344005005252609 K 1.2374 - 84 + 1 2.259 47457.8 0.959999978542328 1052 4851 5901 HBL1_DMSO_200M_050219_1,5905 HBL1_DMSO_200M_050219_1,5905,GTAPASRGFR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5906 29.767 800.0 203530.0 25 0 71707.0 -1 0 139 437.2311480019969 436.22387153539694 1 437.2308227419853 MULTI CID FTMS 0 0 0 5901 132931.1875 0.4930961521720155 -30 0.7729339599609375 5 3 S 1 -1 11.3 0.0 0.0 2.5904 0.0 0.0 331.18074059232896 0.0 331.18074059232896 0.0 2.374144361921396 0.0 0.0 0 0.0 0.0 0.1022338482433752 0.0 S 2.5904 - 33 + 1 2.259 133111.5 0.6899999976158142 1053 4851 5901 HBL1_DMSO_200M_050219_1,5906 HBL1_DMSO_200M_050219_1,5906, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5908 29.772 35.0 1111800.0 25 0 105270.0 + 6222 DTNADKQL 8 73 452.72196935299866 903.4293857727972 2 452.7220031619072 MULTI CID FTMS 0 0 0 5907 1479844.875 0.8056917060928723 1 -0.0076065063476562 1 Unmodified _DTNADKQL_ ENSG00000163220|ENST00000368738|S100A9 58.6788170122104 0.1149141431586871 3 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L} 8 0 {[ES]|[DT]|[{I|L}C]}N + + 38.385 15.19 4.6013 4.2488 4.2488 53.234 0.0 0.0 0.0 0.0 20.53173837412501 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.7059771852360797 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L} 4.2488 + + 236 + 1 2.259 36214.9 1.0 1054 4852 5907 HBL1_DMSO_200M_050219_1,5908 HBL1_DMSO_200M_050219_1,5908,DTNADKQL True True DTNADKQL 29.771582 452.722003161907 55448724.0 5907.0 ENSG00000163220|ENST00000368738|S100A9 6.031469345092773 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5909 29.775 158.0 372920.0 25 0 32484.0 + 24167 LYTINQKH 8 90 339.5237192688679 1015.549328406804 3 339.5236389040947 MULTI CID FTMS 0 0 0 5907 257637.28125 0.0979918127250352 10 -0.1812000274658203 2 Unmodified _LYTINQKH_ REV__ENSG00000126861|ENST00000247271|OMG 8.593279151180031 0.7721714526254883 3 Y 1 -1 11.594 0.0 0.0 1.1416 0.0 0.0 834.4753518216461 0.0 834.4753518216461 0.0 -3.098943791441968 -3.098943791441968 0.0 0 0.0 0.0 0.0 0.0 Y 1.1416 + + 50 + 1 2.259 56075.8 1.0 1055 4852 5907 HBL1_DMSO_200M_050219_1,5909 HBL1_DMSO_200M_050219_1,5909,LYTINQKH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5911 29.782 254.0 307660.0 25 0 32746.0 + 26129 NPSMPQRTV 9 92 523.2579096277078 1044.5012663222155 2 523.2585327029228 MULTI CID FTMS 0 0 0 5910 333958.5 0.640867120366779 9 -0.173593521118164 1 Oxidation (M) _NPSM(Oxidation (M))PQRTV_ ENSG00000197943|ENST00000564138|PLCG2 55.23464941255904 0.0288927259679799 3 NPS{M(Oxidation (M))|F}PQR{[TV]|[{I|L}S]} 9 0 + 61.054 0.0 0.0 5.8453 5.8453 87.268 0.0 0.0 0.0 34.856537694451575 2.632192780232785 2.632192780232785 9.208187539523747 0 1.024227503252014 1.5228787452803376 0.0 0.0 + + NPS{M(Oxidation (M))|F}PQR{[TV]|[{I|L}S]};NPS{M(Oxidation (M))|F}P[AG]R{[TV]|[{I|L}S]};[NP]S[KP][{M(Oxidation (M))|F}V]PC(Carbamidomethyl (C));NPS[Q{I|L}][Q{I|L}][MD];NPS[Q{I|L}]{[QN]|[E{I|L}]|[KN]}[MN];[PS]N[KP][{M(Oxidation (M))|F}V]PC(Carbamidomethyl (C)) 5.8453;4.9637;4.2709;3.4774;3.0206;1.4463 +;-;-;-;-;- + 186 + 1 2.259 67032.4 1.0 1056 4853 5910 HBL1_DMSO_200M_050219_1,5911 HBL1_DMSO_200M_050219_1,5911,NPSMPQRTV True False NPSMPQRTV 29.781673 523.258532702923 11329044.0 5910.0 ENSG00000197943|ENST00000564138|PLCG2 8.8822603225708 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5912 29.796 800.0 53245.0 25 0 3078.4 -1 0 53 796.6781249894466 2387.01254556854 3 796.6790649294853 MULTI CID FTMS 0 0 0 5910 41766.078125 0.4442452130521583 -1 0.0076065063476562 2 3 VS 2 -1 21.454 0.0 0.0 0.89877 0.0 0.0 1363.5859972401531 834.3006868339132 2197.8866840740666 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9247425010840048 0.0 VS 0.89877 - 65 + 1 2.259 39382.3 0.4399999976158142 1057 4853 5910 HBL1_DMSO_200M_050219_1,5912 HBL1_DMSO_200M_050219_1,5912, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5913 29.809 800.0 127830.0 25 0 9200.2 -1 VPPACGPG 8 164 377.6825520613151 0 377.6825439333916 PEAK CID FTMS 0 0 0 5910 84827.7421875 1.0 0 0.0 3 Carbamidomethyl (C) _VPPAC(Carbamidomethyl (C))GPG_ ENST00000436747.5_1_2:242681986-242688401:+|nuORF;ENST00000496252.5_1_2:242688287-242688739:+|nuORF;nc|ENSG00000180902|Q8N465-3|D2HGDH 2.889219685676258 0.5898224805723975 3 T 1 -1 8.9794 0.0 0.0 1.1919 0.0 0.0 131.04151252673893 518.2412693752127 649.2827819019517 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 T 1.1919 - 20 + 1 2.259 83897.3 0.4099999964237213 1058 4853 5910 HBL1_DMSO_200M_050219_1,5913 HBL1_DMSO_200M_050219_1,5913,VPPACGPG False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 5916 29.829 800.0 25151.0 25 0 4277.6 -1 0 53 645.3152623795095 1932.9239577387284 3 645.9826537966728 MULTI CID FTMS 0 0 0 5915 21401.224609375 0.2592816467455636 1 -0.0438308715820312 1 3 QD 2 -1 26.766 0.0 0.0 1.3847 0.0 0.0 1671.8282373791562 0.0 1671.8282373791562 0.0 15.969100130080562 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.5 QD 1.3847 - 21 + 1 2.263 25299.2 0.6200000047683716 1059 4855 5915 HBL1_DMSO_200M_050219_1,5916 HBL1_DMSO_200M_050219_1,5916, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5917 29.843 800.0 231470.0 25 0 16693.0 + 21311 LPEQGGSRHV 10 188 360.5247865156998 1078.5525301472994 3 360.5244933962822 MULTI CID FTMS 0 0 0 5915 146056.34375 0.7918043608506546 -1 0.003885269165039 2 Unmodified _LPEQGGSRHV_ ENSG00000090924|ENST00000425673|PLEKHG2;nc|ENSG00000090924|Q9H7P9-3|PLEKHG2 18.373094154950223 0.5392593366289069 3 {I|L}PEQG 5 5 54.149 0.0 0.0 5.0205 0.0 0.0 0.0 551.2703951471311 551.2703951471311 42.15946093797791 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.4247425010840047 0.4247425010840047 + {I|L}PEQG 5.0205 + + 732 + 1 2.263 152033.8 0.7200000286102295 1060 4855 5915 HBL1_DMSO_200M_050219_1,5917 HBL1_DMSO_200M_050219_1,5917,LPEQGGSRHV False True LPEQGGSRHV 29.843165 360.524493396282 1031566.25 5915.0 ENSG00000090924|ENST00000425673|PLEKHG2;;nc|ENSG00000090924|Q9H7P9-3|PLEKHG2 5.04528005917867 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5918 29.857 800.0 191580.0 25 0 11052.0 33933 SLGQLYFEH 9 130 547.2668571360296 1092.519161338859 2 547.2652465701103 MULTI CID FTMS 0 0 0 5915 91353.9453125 0.213898973099517 -9 0.2765102386474609 3 Unmodified _SLGQLYFEH_ ENSG00000214013|ENST00000318010|GANC;ENST00000567421.1_1_15:42570725-42619667:+|nuORF 28.486842064014134 0.1687311288560894 3 [KQ]EYSSSKH 9 8 [KQ]E + + 34.43 16.497 4.2827 3.1514 3.1514 50.476 0.0 0.0 0.0 0.0 -3.244436960206308 -3.244436960206308 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 [KQ]EYSSSKH 3.1514 - 1059 + 1 2.263 121384.5 0.6499999761581421 1061 4855 5915 HBL1_DMSO_200M_050219_1,5918 HBL1_DMSO_200M_050219_1,5918,SLGQLYFEH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5921 29.877 800.0 278490.0 25 0 56443.0 + 32568 SASPPSRAV 9 153 436.2350896566317 0 436.2352783083916 PEAK CID FTMS 0 0 0 5920 228749.890625 1.0 0 0.0 1 Unmodified _SASPPSRAV_ ENSG00000184863|ENST00000401878|RBM33;ENST00000307403.6_1_7:155532339-155538302:+|nuORF 26.268140514670165 0.1442484609216422 3 SPP 3 6 23.672 0.0 0.0 2.7195 0.0 0.0 158.06855208989742 428.22480188541255 586.29335397531 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.5 0.0 + SPP 2.7195 + + 23 + 1 2.263 173892.0 0.8399999737739563 1062 4857 5920 HBL1_DMSO_200M_050219_1,5921 HBL1_DMSO_200M_050219_1,5921,SASPPSRAV False True SASPPSRAV 29.876883 436.235278308392 1967084.375 5920.0 ENSG00000184863|ENST00000401878|RBM33;;ENST00000307403.6_1_7:155532339-155538302:+|nuORF 4.878413836161296 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5922 29.891 800.0 159520.0 25 0 8864.2 -1 0 108 753.9916625024688 2258.953158107606 3 753.9922363162041 MULTI CID FTMS 0 0 0 5920 128760.9921875 0.1412076621372806 -10 0.2993545532226562 2 3 [PS]T{[YC]|[HE]}TGQSVDP 12 -1 77.507 0.0 0.0 3.4311 0.0 0.0 0.0 1020.4017123466284 1020.4017123466284 58.55774396488272 0.0 0.0 0.0 0 0.0 1.3979400086720375 2.385151878060192 0.7614393726401688 [PS]T{[YC]|[HE]}TGQSVDP 3.4311 - 7410 1 2.263 93815.2 0.6700000166893005 1063 4857 5920 HBL1_DMSO_200M_050219_1,5922 HBL1_DMSO_200M_050219_1,5922, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5924 29.907 800.0 31848.0 25 0 2802.3 -1 0 47 967.469196807452 1932.923840681704 2 967.4715453982352 MULTI CID FTMS 0 0 0 5923 44010.3125 0.522160191092544 1 -0.0433216094970703 1 3 V 1 -1 6.9897 0.0 0.0 0.36161 0.0 0.0 1485.7277480076789 345.1052645318969 1830.833012539576 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.36161 - 19 + 1 2.263 24715.5 0.4000000059604645 1064 4858 5923 HBL1_DMSO_200M_050219_1,5924 HBL1_DMSO_200M_050219_1,5924, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5925 29.91 142.0 495490.0 25 0 78224.0 + 3935 DALKNRSSV 9 99 330.5174163286737 988.5304195862212 3 330.5171691775322 MULTI CID FTMS 0 0 0 5923 209325.046875 0.5537686834058254 -7 0.1722087860107422 2 Unmodified _DALKNRSSV_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 13.042465956692816 0.4836390050082244 3 {[DA]|[EG]}{I|L}K 4 5 36.682 0.0 0.0 3.7108 0.0 0.0 0.0 558.2644523277413 558.2644523277413 25.08864383480216 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}{I|L}K 3.7108 + + 60 + 1 2.263 60114.3 1.0 1065 4858 5923 HBL1_DMSO_200M_050219_1,5925 HBL1_DMSO_200M_050219_1,5925,DALKNRSSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5926 29.92 599.0 182390.0 25 0 17887.0 + 3936 DALKNRSSV 9 119 495.2723514009352 988.5301498686704 2 495.2714416384697 MULTI CID FTMS 0 0 0 5923 150266.921875 0.6357262509840385 -7 0.1722087860107422 3 Unmodified _DALKNRSSV_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 28.49450938151212 0.1686335738423394 3 DA{I|L}KN 5 4 53.465 0.0 0.0 5.4086 0.0 0.0 0.0 444.2224215143188 444.2224215143188 42.35593051741149 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.0 0.0 + DA{I|L}KN 5.4086 + + 146 + 1 2.263 90772.8 1.0 1066 4858 5923 HBL1_DMSO_200M_050219_1,5926 HBL1_DMSO_200M_050219_1,5926,DALKNRSSV False True DALKNRSSV 29.920168 495.27144163847 22470989.5 5923.0 nc|ENSG00000102900|Q8N1F7-2|NUP93;;ENSG00000102900|ENST00000308159|NUP93 4.772898197174072 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5927 29.934 800.0 124420.0 25 0 9438.1 + 29859 QQSISDAEQR 10 117 581.2786210792368 1160.5426892252735 2 581.2790405154228 MULTI CID FTMS 0 0 0 5923 82288.8828125 0.5141073552996711 -6 0.1236572265625 4 Unmodified _QQSISDAEQR_ CON__P04264;ENSG00000167768|ENST00000252244|KRT1 49.52724829834842 0.0829255630816734 3 QQS{I|L}SDAEQR 10 0 + 70.909 0.0 0.0 6.11 6.11 86.157 0.0 0.0 0.0 7.269987279362624 7.647127195296584 7.269987279362624 7.647127195296584 0 0.3252574989159953 0.0 0.805462187404089 0.6237125054200234 + + QQS{I|L}SDAEQR;{[TV]|[{I|L}S]}[KC]ADS{I|L}S[HT];QQS{I|L}SDAE[AG]R;[AG]Q[{M(Oxidation (M))|F}V]DS{I|L}S[HT];YY[YK]S{I|L}S[HT];[AG][R{M(Oxidation (M))|F}]WS{I|L}S[HT];[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ADS{I|L}S[HT];[NP]D[YK]S{I|L}S[HT];QQ[{M(Oxidation (M))|F}V]DS{I|L}S[HT];QQ{[WT]|[RM]}DAEQR 6.11;5.4511;5.3203;4.5882;4.2639;4.214;4.0224;3.8143;3.6393;3.5617 +;-;-;-;-;-;-;-;-;- + 522 + 1 2.263 79060.2 0.4399999976158142 1067 4858 5923 HBL1_DMSO_200M_050219_1,5927 HBL1_DMSO_200M_050219_1,5927,QQSISDAEQR True True QQSISDAEQR 29.934 581.279040515423 687532.875 5923.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 6.047049204508464 2.0 True 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 5929 29.939 5.8 10081000.0 25 0 1724000.0 -1 LAKGNKEMK 9 69 517.7865055958047 1033.5584582584092 2 517.7870361208916 MULTI CID FTMS 0 0 0 5928 10726995.0 0.0440564940296379 13 -0.1383075714111328 1 Oxidation (M) _LAKGNKEM(Oxidation (M))K_ ENST00000568218.2_1_15:32605934-32606516:-|nuORF;ENST00000569415.1_1_15:30516861-30517158:+|nuORF 24.020572477871973 0.2255576514309169 3 KTT[{I|L}P][WP]K 8 -1 45.539 0.0 0.0 4.406 0.0 0.0 63.99780956205627 0.0 63.99780956205627 0.0 30.84630327004689 0.0 0.0 0 1.305462187404089 0.0 1.3494850021680094 0.2614393726401688 KTT[{I|L}P][WP]K 4.406 - 76 + 1 2.263 51690.2 1.0 1068 4859 5928 HBL1_DMSO_200M_050219_1,5929 HBL1_DMSO_200M_050219_1,5929,LAKGNKEMK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 5930 29.94 24.0 2150400.0 25 0 149540.0 + 38390 TRATPSAAFL 10 75 345.52710717968927 1033.5594921392678 3 345.5267516970634 MULTI CID FTMS 0 0 0 5928 2134170.25 0.0427864964961176 21 -0.2397384643554687 2 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 20.41453444215458 0.5050059513928961 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 29.544 19.297 4.4956 2.8585 2.8585 49.929 0.0 0.0 0.0 0.0 16.273043837969325 0.0 0.0 0 0.5 0.0 0.6421590589602533 0.1747425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.8585 - 97 + 1 2.263 52884.8 1.0 1069 4859 5928 HBL1_DMSO_200M_050219_1,5930 HBL1_DMSO_200M_050219_1,5930,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5932 29.944 103.0 381760.0 25 0 39839.0 + 3643 DAEMTTRMV 9 75 543.2334462014411 1084.452339469682 2 543.2338134646416 MULTI CID FTMS 0 0 0 5931 591615.4375 0.9251906831616384 -4 0.0827293395996093 1 2 Oxidation (M) _DAEM(Oxidation (M))TTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 41.95555342248728 0.0647214845423414 3 {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V 9 0 + 70.015 0.0 0.0 6.4562 6.4562 93.114 0.0 0.0 0.0 40.69553846401256 4.973024840566467 4.973024840566467 40.059034764951846 0 1.305462187404089 2.0 0.3807196863200844 0.0 + + {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V;{[DA]|[EG]}E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}V;[YT]RTT[DP][EC];{[TV]|[{I|L}S]}RTT{M(Oxidation (M))|F}E[EC];[YT]RT[PS]E[EC];{[TV]|[{I|L}S]}RT{M(Oxidation (M))|F}TE[EC];{[{M(Oxidation (M))|F}C]|[YS]}E{[RE]|[WV]}R{M(Oxidation (M))|F}V;[YT]R[PS]TE[EC];{[TV]|[{I|L}S]}R{[YC]|[HE]}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H];W{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[PS]R{M(Oxidation (M))|F}V 6.4562;2.7623;2.4071;2.0915;2.0561;1.9291;1.7104;1.6161;1.3365;1.3111 +;-;-;-;-;-;-;-;-;- + 250 + 1 2.263 36352.2 1.0 1070 4860 5931 HBL1_DMSO_200M_050219_1,5932 HBL1_DMSO_200M_050219_1,5932,DAEMTTRMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5935 29.964 800.0 80027.0 25 0 7969.5 -1 TKNVPGKMK 9 94 509.78963590223816 1017.5647188712765 2 509.7891418337822 MULTI CID FTMS 0 0 0 5934 40732.69921875 0.3374377326047381 -9 0.173593521118164 1 Oxidation (M) _TKNVPGKM(Oxidation (M))K_ ENSG00000176208|ENST00000321990|ATAD5;ENST00000585133.1_1_17:29162236-29196669:+|nuORF;nc|ENSG00000176208|Q96QE3-2|ATAD5 13.90604991867851 0.4602628045680013 3 {M(Oxidation (M))|F}K 2 -1 24.253 0.0 0.0 2.3834 0.0 0.0 724.4250837167826 0.0 724.4250837167826 0.0 10.370156338638592 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 {M(Oxidation (M))|F}K 2.3834 + + 86 + 1 2.266 55747.0 0.6299999952316284 1071 4862 5934 HBL1_DMSO_200M_050219_1,5935 HBL1_DMSO_200M_050219_1,5935,TKNVPGKMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5939 29.977 144.0 553610.0 25 0 50544.0 -1 0 95 323.17019520199227 322.1629187353923 1 323.1698486208916 MULTI CID FTMS 0 0 0 5938 584009.4375 0.5249815607701284 -21 0.4892425537109375 1 3 VH 2 -1 10.969 0.0 0.0 3.4048 0.0 0.0 0.0 83.0144518487914 83.0144518487914 10.969100130080562 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VH 3.4048 - 5 + 1 2.266 69313.4 1.0 1072 4865 5938 HBL1_DMSO_200M_050219_1,5939 HBL1_DMSO_200M_050219_1,5939, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5941 29.982 44.0 936530.0 25 0 83591.0 + 3581 DAAHAQTEV 9 69 471.2198453706922 940.4251378081844 2 471.2197143435478 MULTI CID FTMS 0 0 0 5940 1240193.5 0.8135153672608694 5 -0.0890064239501953 1 Unmodified _DAAHAQTEV_ ENSG00000154174|ENST00000284320|TOMM70 30.63653989081413 0.1413794767160703 3 {[DA]|[EG]}[HA]AQTEV 9 0 + 45.141 0.0 0.0 4.8 4.8 80.23 0.0 0.0 0.0 16.997418399861743 28.1509840653446 16.997418399861743 6.020599913279618 0 0.3935078169319297 1.5228787452803376 0.7614393726401688 0.0 + + {[DA]|[EG]}[HA]AQTEV;{[DA]|[EG]}[HA]ATQEV;{[DA]|[EG]}[HA]AGATEV;{[DA]|[EG]}[HA]AT[AG]EV;[HA]{[DA]|[EG]}AQTEV;[HA]{[DA]|[EG]}ATQEV;[HA]{[DA]|[EG]}AGATEV;[HA]{[DA]|[EG]}AT[AG]EV;{[SA]|[TG]}[HA]AEQEV;{[SA]|[TG]}[HA]AQEEV 4.8;4.1598;3.5251;3.1807;2.9448;2.3046;1.6699;1.3254;0.8565;0.75345 +;-;-;-;-;-;-;-;-;- + 180 1 2.266 38727.8 1.0 1073 4866 5940 HBL1_DMSO_200M_050219_1,5941 HBL1_DMSO_200M_050219_1,5941,DAAHAQTEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5942 29.996 800.0 171460.0 25 0 14303.0 + 36943 TEVTRRMAE 9 160 364.85434756125903 1091.5412132839772 3 364.8541747927666 MULTI CID FTMS 0 0 0 5940 110932.1015625 0.7749102097314685 1 -0.0187263488769531 2 Unmodified _TEVTRRMAE_ ENSG00000105141|ENST00000427043|CASP14 26.020703789607367 0.2001090068861241 3 TEE 3 6 60.635 0.0 0.0 5.555 0.0 0.0 0.0 729.3829099144638 729.3829099144638 40.30028862885976 0.0 0.0 0.0 0 0.5941876774005248 2.0 0.8494850021680094 0.0 TEE 5.555 - 426 + 1 2.266 114928.2 0.8999999761581421 1074 4866 5940 HBL1_DMSO_200M_050219_1,5942 HBL1_DMSO_200M_050219_1,5942,TEVTRRMAE False True TEVTRRMAE 29.995985 364.854174792767 501211.625 5940.0 ENSG00000105141|ENST00000427043|CASP14 4.186029990514119 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5945 30.016 800.0 256910.0 25 0 16855.0 + 27141 PFPLGTPRL 9 223 333.1981220515379 996.5725367548137 3 333.1979553103447 MULTI CID FTMS 0 0 0 5944 85124.6015625 0.1448631340105131 -11 0.138956069946289 1 Unmodified _PFPLGTPRL_ REV__ENST00000595775.5_1_19:42817488-42818494:+|nuORF 36.04419817259434 0.0971720506436186 3 TPR{I|L} 4 -1 32.868 0.0 0.0 3.2981 0.0 0.0 511.28665646786345 0.0 511.28665646786345 0.0 18.404112767164733 0.0 0.0 0 0.4247425010840047 0.0 1.3494850021680094 0.0 TPR{I|L} 3.2981 + + 515 1 2.266 161717.4 0.5600000023841858 1075 4868 5944 HBL1_DMSO_200M_050219_1,5945 HBL1_DMSO_200M_050219_1,5945,PFPLGTPRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5946 30.03 800.0 151660.0 25 0 60840.0 19954 LIENRISM 8 105 488.2674271628874 0 488.2675048708916 PEAK CID FTMS 0 0 0 5944 133431.09375 0.5143638793210673 21 -0.5287914276123047 2 Unmodified _LIENRISM_ ENSG00000064313|ENST00000378164|TAF2 5.230669730166228 0.5807325378471833 3 V 1 8 3.9794 0.0 0.0 0.40834 0.0 0.0 776.3470969021437 96.08240686588124 872.4295037680249 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.40834 - 12 + 1 2.266 98039.0 0.7200000286102295 1076 4868 5944 HBL1_DMSO_200M_050219_1,5946 HBL1_DMSO_200M_050219_1,5946,LIENRISM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5948 30.034 89.0 518570.0 25 0 44855.0 + 6223 DTNADKQL 8 90 452.72196935299866 903.4293857727972 2 452.7220641970634 MULTI CID FTMS 0 0 0 5947 651490.3125 0.3546995703729443 18 -0.4381294250488281 1 Unmodified _DTNADKQL_ ENSG00000163220|ENST00000368738|S100A9 66.45667989310934 0.1167381424463928 3 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L} 8 0 + 57.191 0.0 0.0 6.3304 6.3304 89.446 0.0 0.0 0.0 31.326994156836392 13.399480616943508 13.399480616943508 9.262137858390815 0 1.5356668758921828 0.0 0.0 0.75 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L};{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L};{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L};{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L} 6.3304;5.3052;4.9451;3.9259 +;-;-;- + 207 + 1 2.266 43643.5 1.0 1077 4869 5947 HBL1_DMSO_200M_050219_1,5948 HBL1_DMSO_200M_050219_1,5948,DTNADKQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5949 30.048 800.0 118520.0 25 0 5422.5 + 2602 ASNVTNKTD 9 141 496.238342093134 990.462131253068 2 496.2386962771416 MULTI CID FTMS 0 0 0 5947 111478.59375 0.3680257692266426 -8 0.0853595733642578 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNVTNKTD_ ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 53.40400417844725 0.0329064971918313 3 [WQ]V{M(Oxidation (M))|F}STNG 8 8 43.167 0.0 0.0 4.3583 0.0 0.0 0.0 68.05122553043202 68.05122553043202 25.458800173440743 0.0 0.0 0.0 0 1.1237125054200234 0.0 0.9247425010840048 0.9802046884880936 [WQ]V{M(Oxidation (M))|F}STNG 4.3583 - 600 + 1 2.266 74217.1 0.5199999809265137 1078 4869 5947 HBL1_DMSO_200M_050219_1,5949 HBL1_DMSO_200M_050219_1,5949,ASNVTNKTD True False ASNVTNKTD 30.048382 496.238696277142 1254546.75 5947.0 nc|ENSG00000092199|P07910-3|HNRNPC;;nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;nc|ENSG00000092199|P07910|HNRNPC 7.938125769297282 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5950 30.062 800.0 187600.0 25 0 19001.0 + 17566 KPQNSKAKP 9 132 499.293083503904 996.571614074608 2 499.2926208376884 MULTI CID FTMS 0 0 0 5947 99137.609375 0.2897642384522128 -11 0.1389923095703125 3 Unmodified _KPQNSKAKP_ REV__ENSG00000107669|ENST00000224652|ATE1;REV__nc|ENSG00000107669|O95260-2|ATE1 29.081581746732265 0.1611639662936252 3 KPT 3 -1 37.664 0.0 0.0 3.7793 0.0 0.0 0.0 667.352664366096 667.352664366096 23.138788439798343 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.0 0.0 KPT 3.7793 - 110 + 1 2.266 118485.8 0.4900000095367431 1079 4869 5947 HBL1_DMSO_200M_050219_1,5950 HBL1_DMSO_200M_050219_1,5950,KPQNSKAKP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5953 30.072 193.0 283600.0 25 0 24372.0 + + 16075 AQLEEAKQA 9 103 494.2672219651956 986.5198909971912 2 494.2600585818291 MULTI CID FTMS 0 0 0 5952 213315.8125 0.1028331989462186 -11 0.1264934539794922 1 Unmodified _ITPMQAKAQ_ ENSG00000116459|ENST00000369722|ATP5PB;ENST00000567372.1_1_18:65945123-65945423:-|nuORF 15.847184025352805 0.4077185912009129 3 MPK[DV]AK[QA] 9 -1 + 41.071 0.0 0.0 4.1632 4.1632 71.152 0.0 0.0 0.0 4.317496819840649 0.7378621416091846 0.7378621416091846 0.8715017571890016 0 0.0 1.0457574905606752 0.0 0.7302046884880937 MPK[DV]AK[QA];[QA]{I|L}EEAK[QA];MPK{[RE]|[WV]}K[QA];MPKHN[YV]V;MPKH[Y{I|L}][QA];MP[WR]AK[QA];[QA]{I|L}GSE{I|L}[RN];MPKHGG[YV]V;MPK[QT]{I|L}A[QA];MPK[DV][W{I|L}]V 4.1632;4.0748;3.9901;3.9585;3.6042;3.5065;3.2642;3.0196;2.7894;2.6681 -;-;-;-;-;-;-;-;-;- 529 + 1 2.266 47191.7 1.0 1080 4871 5952 HBL1_DMSO_200M_050219_1,5953 HBL1_DMSO_200M_050219_1,5953,ITPMQAKAQ False False AQLEEAKQA 30.072259 494.260058581829 1348588.125 5952.0 ENSG00000116459|ENST00000369722|ATP5PB;;ENST00000567372.1_1_18:65945123-65945423:-|nuORF 4.363555351893107 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5958 30.093 402.0 94935.0 25 0 6819.1 + 44950 YPQFEQSE 8 69 514.2201742022968 0 514.2208740115166 PEAK CID FTMS 0 0 0 5957 62150.3203125 0.505141556632114 1 -0.0234050750732421 1 Unmodified _YPQFEQSE_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3 20.453626601364224 0.4093984001168845 3 S 1 7 13.411 0.0 0.0 1.3066 0.0 0.0 792.3400543598685 144.03032861881096 936.3703829786796 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 + S 1.3066 + + 20 + 1 2.266 36101.3 1.0 1081 4875 5957 HBL1_DMSO_200M_050219_1,5958 HBL1_DMSO_200M_050219_1,5958,YPQFEQSE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5959 30.107 800.0 165990.0 25 0 9783.7 + 3675 DAEPHQRVV 9 150 350.84887197093167 1049.524786512995 3 350.8487121462822 MULTI CID FTMS 0 0 0 5957 89820.9453125 0.4064318006799244 -7 0.0842113494873046 2 Unmodified _DAEPHQRVV_ ENSG00000196976|ENST00000357360|LAGE3 20.453626601364224 0.2830276176381075 3 QHP[C(Carbamidomethyl (C))H] 5 7 21.51 0.0 0.0 2.0495 0.0 0.0 372.24864394355626 0.0 372.24864394355626 0.0 11.232647785155532 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 QHP[C(Carbamidomethyl (C))H] 2.0495 - 89 1 2.266 111535.3 0.5299999713897705 1082 4875 5957 HBL1_DMSO_200M_050219_1,5959 HBL1_DMSO_200M_050219_1,5959,DAEPHQRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5962 30.128 800.0 146360.0 25 0 9428.3 + 3676 DAEPHQRVV 9 146 525.7696770274813 1049.5248011217625 2 525.7697631716728 MULTI CID FTMS 0 0 0 5961 96017.046875 0.5536373389475262 -5 0.0389213562011718 1 Unmodified _DAEPHQRVV_ ENSG00000196976|ENST00000357360|LAGE3 26.268140514670165 0.1969607489560049 3 DAEPHQ 6 3 54.698 0.0 0.0 5.2117 0.0 0.0 0.0 369.2261141412719 369.2261141412719 39.07599871191295 0.0 0.0 0.0 0 0.8182503180159344 1.6989700043360187 0.0 0.3494850021680094 + DAEPHQ 5.2117 + + 435 + 1 2.266 97014.7 0.6200000047683716 1083 4877 5961 HBL1_DMSO_200M_050219_1,5962 HBL1_DMSO_200M_050219_1,5962,DAEPHQRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5964 30.135 264.0 235910.0 25 0 15246.0 -1 0 64 753.9916625024688 2258.953158107606 3 754.3264037966728 MULTI CID FTMS 0 0 0 5963 264077.03125 0.2569314309332434 10 -0.3731632232666015 1 3 VS{[SA]|[TG]}Q[SG]H[HD] 10 -1 42.14 0.0 0.0 1.8655 0.0 0.0 1235.5278153042568 0.0 1235.5278153042568 0.0 31.170912423450403 0.0 0.0 0 0.4247425010840047 0.0 1.774227503252014 0.5 VS{[SA]|[TG]}Q[SG]H[HD] 1.8655 - 806 + 1 2.266 51890.6 1.0 1084 4878 5963 HBL1_DMSO_200M_050219_1,5964 HBL1_DMSO_200M_050219_1,5964, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5965 30.14 255.0 202860.0 25 0 14631.0 -1 0 53 1037.974986253296 2073.935419573392 2 1038.476855456829 MULTI CID FTMS 0 0 0 5963 527911.375 1.0 0 0.0 2 3 {M(Oxidation (M))|F}[DG]{I|L}ST[WQ]QVG{M(Oxidation (M))|F} 12 -1 31.793 0.0 0.0 1.533 0.0 0.0 510.2131274364595 195.04152856998283 705.2546560064424 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {M(Oxidation (M))|F}[DG]{I|L}ST[WQ]QVG{M(Oxidation (M))|F} 1.533 - 353 + 1 2.266 45610.3 1.0 1085 4878 5963 HBL1_DMSO_200M_050219_1,5965 HBL1_DMSO_200M_050219_1,5965, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5966 30.144 186.0 198010.0 25 0 12015.0 -1 GMDCQECTCEA 11 62 459.4788198548725 0 459.4788696169853 PEAK CID FTMS 0 0 0 5963 307023.09375 1.0 0 0.0 3 3 Carbamidomethyl (C),Oxidation (M) _GM(Oxidation (M))DC(Carbamidomethyl (C))QEC(Carbamidomethyl (C))TC(Carbamidomethyl (C))EA_ ENSG00000215182|ENST00000621226|MUC5AC 0.0948413911109767 0.4761840153648598 3 W 1 -1 4.6041 0.0 0.0 0.50211 0.0 0.0 394.6741791611138 333.1788424127563 727.8530215738701 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.50211 - 9 + 1 2.266 36342.1 1.0 1086 4878 5963 HBL1_DMSO_200M_050219_1,5966 HBL1_DMSO_200M_050219_1,5966,GMDCQECTCEA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5967 30.158 800.0 76139.0 25 0 38646.0 -1 CDTEDDCGDH 10 66 612.1809718054626 0 611.9691650271416 PEAK CID FTMS 0 0 0 5963 16876.82421875 0.8865716256539939 -1 0.0169620513916015 4 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))DTEDDC(Carbamidomethyl (C))GDH_ ENSG00000123384|ENST00000243077|LRP1 0.4583401331227399 0.3961065659209837 3 E 1 -1 7.232 0.0 0.0 0.59165 0.0 0.0 611.0543131404189 479.2367647760376 1090.2910779164563 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 E 0.59165 + + 3 + 1 2.266 52600.8 0.7400000095367432 1087 4878 5963 HBL1_DMSO_200M_050219_1,5967 HBL1_DMSO_200M_050219_1,5967,CDTEDDCGDH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5969 30.174 800.0 25903.0 25 0 1682.2 20807 LLVVYPWTQR 10 52 637.8668701052666 0 637.8668701052666 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 9.38312468134398 0.3794934366477728 3 D 1 10 6.9897 0.0 0.0 0.54876 0.0 0.0 817.5231543927749 338.1467684381469 1155.669922830922 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.54876 - 4 + 1 2.266 24598.2 0.6700000166893005 1088 4879 5968 HBL1_DMSO_200M_050219_1,5969 HBL1_DMSO_200M_050219_1,5969,LLVVYPWTQR False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 5971 30.178 21.0 2705200.0 25 0 372600.0 + 24805 MPKAEKNAV 9 81 329.84792951718725 986.5219591517618 3 329.8476745486259 MULTI CID FTMS 0 0 0 5970 2671437.75 0.3616573552788583 -2 0.0455474853515625 1 Unmodified _MPKAEKNAV_ ENSG00000125877|ENST00000380113|ITPA;ENST00000472295.1_1_20:3202423-3204105:+|nuORF;ENST00000490838.6_1_20:3193963-3204105:+|nuORF;nc|ENSG00000125877|Q9BY32-2|ITPA;nc|ENSG00000125877|Q9BY32-3|ITPA 24.020572477871973 0.2255576514309169 3 MPK[YR][RH] 7 6 + 30.061 0.0 0.0 3.0472 3.0472 82.232 0.0 0.0 0.0 17.5869662711046 0.0561319334202892 0.0561319334202892 23.73999144588388 0 0.0 0.0 0.0 0.805462187404089 MPK[YR][RH];[{M(Oxidation (M))|F}T][KP]AN[NP]V;[{M(Oxidation (M))|F}T][KP]AM{[HG]|PP}V 3.0472;0.64076;0.41588 -;-;- 81 + 1 2.266 51650.7 1.0 1089 4880 5970 HBL1_DMSO_200M_050219_1,5971 HBL1_DMSO_200M_050219_1,5971,MPKAEKNAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5972 30.193 800.0 171310.0 25 0 51025.0 15480 IPSERQRQV 9 110 556.8121404652397 1111.6097279972794 2 556.8119994997978 MULTI CID FTMS 0 0 0 5970 99322.0390625 0.5738432157410768 -1 0.0161552429199218 2 Unmodified _IPSERQRQV_ ENSG00000140968|ENST00000268638|IRF8 18.1463463914782 0.3454829746528889 3 VKP 3 9 26.484 0.0 0.0 2.3825 0.0 0.0 0.0 784.3550509088499 784.3550509088499 2.530834337684311 0.0 0.0 0.0 0 0.1307196863200844 0.0 0.0 0.3494850021680094 VKP 2.3825 - 59 + 1 2.266 110570.3 0.5199999809265137 1090 4880 5970 HBL1_DMSO_200M_050219_1,5972 HBL1_DMSO_200M_050219_1,5972,IPSERQRQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5973 30.204 633.0 178780.0 25 0 17271.0 + -1 TYAGSKSAM 9 136 458.21572710660496 914.41690128001 2 458.2157470583916 MULTI CID FTMS 0 0 0 5970 95831.1640625 0.9915624478609574 4 -0.206573486328125 3 Oxidation (M) _VPAYYGM(Oxidation (M))V_ ENSG00000111328|ENST00000261692|CDK2AP1;nc|ENSG00000111328|O14519-2|CDK2AP1;ENST00000526447.1_1_11:67274830-67275269:-|nuORF;ENST00000525402.5_1_11:67274418-67275269:-|nuORF;ENSG00000167797|ENST00000301488|CDK2AP2 11.114462752807354 0.7467182956244686 3 [YT][YG]SQSG 8 -1 35.09 0.0 0.0 3.8374 0.0 0.0 0.0 68.05120264224843 68.05120264224843 23.980465352752617 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7689301784845296 0.0 [YT][YG]SQSG 3.8374 - 239 + 1 2.266 91116.9 1.0 1091 4880 5970 HBL1_DMSO_200M_050219_1,5973 HBL1_DMSO_200M_050219_1,5973,VPAYYGMV False False TYAGSKSAM 30.203598 458.215747058392 490147.5625 5970.0 ENSG00000111328|ENST00000261692|CDK2AP1;;nc|ENSG00000111328|O14519-2|CDK2AP1;;ENST00000526447.1_1_11:67274830-67275269:-|nuORF;;ENST00000525402.5_1_11:67274418-67275269:-|nuORF;;ENSG00000167797|ENST00000301488|CDK2AP2 2.9828164180119834 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5975 30.208 8.6 6964900.0 25 0 1089500.0 + -1 IQRLETMK 8 69 517.7865055958047 1033.5584582584092 2 517.7869750857353 MULTI CID FTMS 0 0 0 5974 6835157.5 0.0280724541766249 35 -0.7487640380859375 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 TT[{I|L}P]AE{M(Oxidation (M))|F}K 8 -1 48.621 0.0 0.0 4.7042 0.0 0.0 128.09520156074376 0.0 128.09520156074376 0.0 28.672137691284405 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 TT[{I|L}P]AE{M(Oxidation (M))|F}K 4.7042 - 198 1 2.272 50733.2 1.0 1092 4881 5974 HBL1_DMSO_200M_050219_1,5975 HBL1_DMSO_200M_050219_1,5975,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5976 30.209 35.0 1440700.0 25 0 98341.0 + 38391 TRATPSAAFL 10 69 345.52710717968927 1033.5594921392678 3 345.5267211794853 MULTI CID FTMS 0 0 0 5974 1484855.5 0.0297688362247533 43 -0.8470611572265625 2 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 20.41453444215458 0.5050059513928961 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 26.61 16.381 3.8163 2.5746 2.5746 49.479 0.0 0.0 0.0 0.0 14.620090229352776 0.0 0.0 0 0.5 0.0 0.6203715150305281 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.5746 - 83 + 1 2.272 50038.2 1.0 1093 4881 5974 HBL1_DMSO_200M_050219_1,5976 HBL1_DMSO_200M_050219_1,5976,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5977 30.214 251.0 473680.0 25 0 83182.0 27332 PHSRLALQP 9 113 340.19656451466926 1017.5678641442078 3 340.1966125369072 MULTI CID FTMS 0 0 0 5974 208656.078125 0.5038713683329904 13 -0.4225597381591797 3 Unmodified _PHSRLALQP_ ENSG00000169953|ENST00000304790|HSFY2;ENSG00000172468|ENST00000307393|HSFY1 2.735195868890462 0.8191998628570236 3 Q 1 8 12.536 0.0 0.0 1.2319 0.0 0.0 871.4986025248703 0.0 871.4986025248703 0.0 2.620837283621213 0.0 0.0 0 0.0 0.0 0.0 0.0941876774005248 + Q 1.2319 + + 35 + 1 2.272 100628.7 1.0 1094 4881 5974 HBL1_DMSO_200M_050219_1,5977 HBL1_DMSO_200M_050219_1,5977,PHSRLALQP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5978 30.228 800.0 148490.0 25 0 17971.0 + 3644 DAEMTTRMV 9 145 543.2334462014411 1084.452339469682 2 543.2334472537041 MULTI CID FTMS 0 0 0 5974 183458.09375 0.2868987324018137 17 -0.4381656646728515 4 2 Oxidation (M) _DAEM(Oxidation (M))TTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 55.50274090549119 0.0285720310785888 3 {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V 9 0 + 76.525 0.0 0.0 7.0566 7.0566 94.668 0.0 0.0 0.0 40.43305028184121 5.942124970647029 5.942124970647029 34.88190856573807 0 1.575257498915995 2.0 0.7742275032520141 0.0 + + {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V;{[DA]|[EG]}T[RV]YE[EC];{[DA]|[EG]}[YR]VTE[EC];WE{M(Oxidation (M))|F}[YK]T[DP];{[TV]|[{I|L}S]}RTT{M(Oxidation (M))|F}E[EC];{[DA]|[EG]}E[EP][{I|L}A]E[DP];[YT]RTT[DP][EC];{[{M(Oxidation (M))|F}C]|[YS]}E{[RE]|[WV]}R{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}RT{M(Oxidation (M))|F}TE[EC];[YT]RT[PS]E[EC] 7.0566;3.8401;3.4881;3.2589;2.7422;2.7047;2.5671;2.4796;2.4646;2.2959 +;-;-;-;-;-;-;-;-;- + 809 + 1 2.272 92388.2 0.699999988079071 1095 4881 5974 HBL1_DMSO_200M_050219_1,5978 HBL1_DMSO_200M_050219_1,5978,DAEMTTRMV True False DAEMTTRMV 30.227852 543.233447253704 16093429.5 5974.0 ENSG00000205220|ENST00000358514|PSMB10 8.932248751322428 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5979 30.242 800.0 221340.0 25 0 42835.0 + 34997 SQMSGSREV 9 130 490.7266166634695 979.438680393739 2 490.7269470095634 MULTI CID FTMS 0 0 0 5974 127800.765625 0.4767668485813834 -2 0.0460319519042968 5 Unmodified _SQMSGSREV_ ENSG00000140471|ENST00000314742|LINS1;ENST00000559149.5_1_15:101113500-101121059:-|nuORF;ENST00000561073.1_1_15:101116892-101121059:-|nuORF;nc|ENSG00000140471|Q8NG48-2|LINS1;nc|ENSG00000140471|Q8NG48-3|LINS1 51.629811660486645 0.0367964933207742 3 {[QS]|[NT]}M[TA]EVE 8 5 45.469 0.0 0.0 4.6423 0.0 0.0 0.0 101.034114313914 101.034114313914 35.63563554718151 0.0 0.0 0.0 0 2.0 1.154901959985743 0.3252574989159953 0.7302046884880937 {[QS]|[NT]}M[TA]EVE 4.6423 - 714 1 2.272 139073.7 0.5699999928474426 1096 4881 5974 HBL1_DMSO_200M_050219_1,5979 HBL1_DMSO_200M_050219_1,5979,SQMSGSREV True True SQMSGSREV 30.241666 490.726947009563 1198854.625 5974.0 ENSG00000140471|ENST00000314742|LINS1;;ENST00000561073.1_1_15:101116892-101121059:-|nuORF;;nc|ENSG00000140471|Q8NG48-3|LINS1;;ENST00000559149.5_1_15:101113500-101121059:-|nuORF;;nc|ENSG00000140471|Q8NG48-2|LINS1 2.398552894592285 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5980 30.255 800.0 67429.0 25 0 4017.2 -1 0 80 752.9877729487227 2255.941489446368 3 753.3233520388603 MULTI CID FTMS 0 0 0 5974 107235.71875 0.908733597683268 3 -0.17669677734375 6 3 ASQGT 5 -1 30.495 0.0 0.0 1.3518 0.0 0.0 1260.5391589793742 548.1862276666624 1808.7253866460364 0.0 0.0 0.0 0.0 0 1.0 0.0 1.110924374808178 0.0 ASQGT 1.3518 - 316 + 1 2.272 45596.8 0.5099999904632568 1097 4881 5974 HBL1_DMSO_200M_050219_1,5980 HBL1_DMSO_200M_050219_1,5980, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5982 30.272 800.0 139150.0 25 0 15924.0 -1 TYIHLLAMK 9 125 553.3050746999096 0 553.3050414919853 PEAK CID FTMS 0 0 0 5981 63327.06640625 0.6405977004481572 1 -0.0697460174560546 1 Oxidation (M) _TYIHLLAM(Oxidation (M))K_ ENSG00000146005|ENST00000274710|PSD2 32.30548876998284 0.0995446103270859 3 KTAT 4 -1 43.321 0.0 0.0 3.9218 0.0 0.0 63.99735230673452 636.3484049202224 700.345757226957 0.0 0.0 0.0 0.0 0 1.110924374808178 0.0 1.805462187404089 0.0 KTAT 3.9218 - 238 + 1 2.272 89072.1 0.5400000214576721 1098 4882 5981 HBL1_DMSO_200M_050219_1,5982 HBL1_DMSO_200M_050219_1,5982,TYIHLLAMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5983 30.275 199.0 385190.0 25 0 30073.0 19507 LFLQRPNSR 9 100 377.55097039318935 1129.631081779768 3 377.5505554080009 MULTI CID FTMS 0 0 0 5981 248302.390625 1.0 0 0.0 2 Unmodified _LFLQRPNSR_ ENSG00000053747|ENST00000313654|LAMA3;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3 4.5288652416199255 0.7565837746943351 3 {I|L}D 2 8 20.969 0.0 0.0 1.8563 0.0 0.0 0.0 898.4978038006232 898.4978038006232 8.979400086720375 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D 1.8563 - 108 + 1 2.272 67075.5 1.0 1099 4882 5981 HBL1_DMSO_200M_050219_1,5983 HBL1_DMSO_200M_050219_1,5983,LFLQRPNSR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5984 30.284 470.0 137040.0 25 0 11867.0 + 10403 FSYIDLLSSAN 11 87 615.3052360437715 1228.595919154343 2 615.3047363162041 MULTI CID FTMS 0 0 0 5981 155178.578125 0.655797685215389 -1 0.0517845153808593 3 Unmodified _FSYIDLLSSAN_ REV__ENSG00000166197|ENST00000605788|NOLC1;REV__nc|ENSG00000166197|Q14978-2|NOLC1;REV__nc|ENSG00000166197|Q14978-3|NOLC1 24.99096001346401 0.505407273373304 3 [AG]SPS{[QV]|[N{I|L}]|[RA]|[KV]}PSQSAN 13 -1 + 95.482 0.0 0.0 7.7717 7.7717 86.479 0.0 0.0 0.0 5.633731995456628 9.07245946763102 5.633731995456628 3.4595758006087323 0 1.75 1.6989700043360187 2.793157681736544 0.0 [AG]SPS{[QV]|[N{I|L}]|[RA]|[KV]}PSQSAN;[AG]SP[WK]PSQSAN;{[SA]|[TG]}GPS{[QV]|[N{I|L}]|[RA]|[KV]}PSQSAN;[AG]SPS{[QV]|[N{I|L}]|[RA]|[KV]}PS[AG]SAN;{[SA]|[TG]}GP[WK]PSQSAN;{[QS]|[NT]}PS{[QV]|[N{I|L}]|[RA]|[KV]}PSQSAN;[AG]SP[WK]PS[AG]SAN;{[DA]|[EG]}{[NV]|[RG]}{[QV]|[N{I|L}]|[RA]|[KV]}PSQSAN;{[QS]|[NT]}P[WK]PSQSAN;{[SA]|[TG]}GPS{[QV]|[N{I|L}]|[RA]|[KV]}PS[AG]SAN 7.7717;7.4901;7.3131;7.0332;7.0315;6.9408;6.7495;6.6817;6.6617;6.5747 -;-;-;-;-;-;-;-;-;- 474 1 2.272 55532.9 1.0 1100 4882 5981 HBL1_DMSO_200M_050219_1,5984 HBL1_DMSO_200M_050219_1,5984,FSYIDLLSSAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5985 30.298 800.0 134980.0 25 0 12068.0 -1 0 93 580.3138538598549 2317.2263095730195 4 580.3134643435478 MULTI CID FTMS 0 0 0 5981 116798.3203125 0.9653639451295216 -1 0.0517845153808593 4 3 GPDWA[QP]QQ 9 -1 36.801 0.0 0.0 1.5881 0.0 0.0 1291.7815657310307 0.0 1291.7815657310307 0.0 29.810990509216506 0.0 0.0 0 0.6421590589602533 0.0 0.0 0.0 GPDWA[QP]QQ 1.5881 - 122 1 2.272 85502.1 0.5799999833106995 1101 4882 5981 HBL1_DMSO_200M_050219_1,5985 HBL1_DMSO_200M_050219_1,5985, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5986 30.311 800.0 109690.0 25 0 6711.3 8052 ENQELPDEGT 10 120 566.2443437938243 1130.4741346544486 2 566.2438842654228 MULTI CID FTMS 0 0 0 5981 97846.46875 1.0 0 0.0 5 Unmodified _ENQELPDEGT_ ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA 12.240655878213236 0.6421556946785427 3 [AG]DQ{[WS]|[C(Carbamidomethyl (C)){I|L}]}AQQ 9 9 32.831 0.0 0.0 2.9042 0.0 0.0 0.0 156.0434002063454 156.0434002063454 14.247265009038289 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.2887254899964357 0.8807196863200843 [AG]DQ{[WS]|[C(Carbamidomethyl (C)){I|L}]}AQQ 2.9042 - 879 1 2.272 73619.1 0.550000011920929 1102 4882 5981 HBL1_DMSO_200M_050219_1,5986 HBL1_DMSO_200M_050219_1,5986,ENQELPDEGT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5987 30.325 800.0 130060.0 25 0 20560.0 -1 0 43 695.0055571493469 2081.994842048241 3 695.3416015505791 MULTI CID FTMS 0 0 0 5981 97842.8359375 1.0 0 0.0 6 3 S 1 -1 3.4949 0.0 0.0 0.16786 0.0 0.0 1301.6457922931727 690.2983492486936 1991.9441415418664 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.16786 - 7 + 1 2.272 82280.8 0.5299999713897705 1103 4882 5981 HBL1_DMSO_200M_050219_1,5987 HBL1_DMSO_200M_050219_1,5987, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5989 30.341 800.0 107930.0 25 0 14509.0 + 17602 KPTAAFHLL 9 120 499.293083503904 996.571614074608 2 499.2928649783134 MULTI CID FTMS 0 0 0 5988 14759.552734375 0.0431399403811924 3 -0.1266593933105468 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 3 KPT 3 -1 39.481 0.0 0.0 3.9617 0.0 0.0 0.0 667.3535860650999 667.3535860650999 27.491596866368013 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.9247425010840048 0.0 KPT 3.9617 + + 70 + 1 2.272 68982.0 0.6600000262260437 1104 4883 5988 HBL1_DMSO_200M_050219_1,5989 HBL1_DMSO_200M_050219_1,5989,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 5990 30.343 93.0 1084400.0 25 0 195230.0 17294 KLRENQLPR 9 97 385.2316535044686 1152.673131113606 3 385.2313110232353 MULTI CID FTMS 0 0 0 5988 688765.125 0.9556918219985888 -1 0.0697460174560546 2 Unmodified _KLRENQLPR_ ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF 10.073929032068715 0.563993802247229 3 K{I|L}T 3 7 33.5 0.0 0.0 2.9063 0.0 0.0 0.0 807.4298189752561 807.4298189752561 24.291746928241125 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.0 K{I|L}T 2.9063 - 32 + 1 2.272 86257.6 1.0 1105 4883 5988 HBL1_DMSO_200M_050219_1,5990 HBL1_DMSO_200M_050219_1,5990,KLRENQLPR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5991 30.353 532.0 239910.0 25 0 20027.0 -1 0 97 464.4523736124145 2317.2254857290727 5 464.6532165408134 MULTI CID FTMS 0 0 0 5988 184082.171875 1.0 0 0.0 3 3 WDP 3 -1 16.198 0.0 0.0 0.69902 0.0 0.0 570.278021972893 1345.7811957704691 1916.0592177433623 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WDP 0.69902 - 144 + 1 2.272 106503.0 1.0 1106 4883 5988 HBL1_DMSO_200M_050219_1,5991 HBL1_DMSO_200M_050219_1,5991, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5992 30.366 800.0 319730.0 25 0 32468.0 + 5870 DPYGGHRDV 9 149 508.2333088588673 1014.4520647845344 2 508.2335998415947 MULTI CID FTMS 0 0 0 5988 110328.8359375 0.061664051834288 -4 0.1675624847412109 4 Unmodified _DPYGGHRDV_ ENSG00000123066|ENST00000281928|MED13L 70.49555756994154 0.020907391616941 3 DPYGGHRDV 9 0 + 88.411 0.0 0.0 8.7151 8.7151 92.844 0.0 0.0 0.0 16.542294029923 8.515099611179195 8.515099611179195 8.515099611179195 0 1.8556270500406933 1.6989700043360187 1.0044321917401078 0.7059771852360797 + + DPYGGHRDV;DPYGG[RV]DH;DPYNHRDV;DPYV[RN]DH;DPYN[RV]DH;DPYVD[RN]H;DPVY[RN]DH;DPYG[HD]{[NV]|[RG]}V;DPVYD[RN]H;DPY[KA]{M(Oxidation (M))|F}{M(Oxidation (M))|F}K 8.7151;7.8757;7.7919;7.2103;6.9525;6.6948;6.4905;6.3455;5.975;5.3622 +;-;-;-;-;-;-;-;-;- + 1481 + 1 2.272 199169.3 0.5400000214576721 1107 4883 5988 HBL1_DMSO_200M_050219_1,5992 HBL1_DMSO_200M_050219_1,5992,DPYGGHRDV True True DPYGGHRDV 30.366459 508.233599841595 35804637.0 5988.0 ENSG00000123066|ENST00000281928|MED13L 7.670242468516032 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5993 30.38 800.0 30788.0 25 0 1715.9 -1 0 65 661.7966996081108 2643.157692566043 4 661.7966186404228 MULTI CID FTMS 0 0 0 5988 101824.984375 1.0 0 0.0 5 3 {[QG]|[NA]}DD 4 -1 9.1567 0.0 0.0 0.34643 0.0 0.0 0.0 2225.003431661999 2225.003431661999 3.672137691284407 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 {[QG]|[NA]}DD 0.34643 - 40 1 2.272 27073.5 0.5199999809265137 1108 4883 5988 HBL1_DMSO_200M_050219_1,5993 HBL1_DMSO_200M_050219_1,5993, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 5995 30.386 67.0 637620.0 25 0 64355.0 + 24807 MPKAEKNAV 9 72 494.2672219651956 986.5198909971912 2 494.2681762576103 MULTI CID FTMS 0 0 0 5994 813901.625 0.3923577288780485 2 -0.0714931488037109 1 Unmodified _MPKAEKNAV_ ENSG00000125877|ENST00000380113|ITPA;ENST00000472295.1_1_20:3202423-3204105:+|nuORF;ENST00000490838.6_1_20:3193963-3204105:+|nuORF;nc|ENSG00000125877|Q9BY32-2|ITPA;nc|ENSG00000125877|Q9BY32-3|ITPA 49.55428908609986 0.0413471690215031 3 MPKAEKNAV 9 0 + 83.96 0.0 0.0 8.5108 8.5108 93.873 0.0 0.0 0.0 51.04786736677495 13.517733521595972 13.517733521595972 9.208187539523747 0 1.0941876774005248 1.6989700043360187 0.0 0.4247425010840047 + + MPKAEKNAV;MPKAEKGGAV;MPKHH[PA]AV;MPK{[CA]|SS}K[NP]V;M[{I|L}T]PNKNAV;[KP]M{[RE]|[WV]}PMV;[{M(Oxidation (M))|F}T]PPNKNAV;{NN|[MP]|[D{I|L}]|[EV]}K{[RE]|[WV]}PMV;[{M(Oxidation (M))|F}T]PPNKGGAV;[{M(Oxidation (M))|F}T]ANPK[NP]V 8.5108;7.5773;5.1412;5.0145;3.4257;3.2352;2.9952;2.8091;2.0618;1.4764 +;-;-;-;-;-;-;-;-;- + 208 + 1 2.281 38891.1 1.0 1109 4884 5994 HBL1_DMSO_200M_050219_1,5995 HBL1_DMSO_200M_050219_1,5995,MPKAEKNAV True True MPKAEKNAV 30.385553 494.26817625761 44592734.0 5994.0 ENST00000472295.1_1_20:3202423-3204105:+|nuORF;;ENST00000490838.6_1_20:3193963-3204105:+|nuORF;;nc|ENSG00000125877|Q9BY32-3|ITPA;;nc|ENSG00000125877|Q9BY32-2|ITPA;;ENSG00000125877|ENST00000380113|ITPA 6.466270923614502 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5996 30.399 800.0 121580.0 25 0 10952.0 + 3677 DAEPHQRVV 9 111 525.7696770274813 1049.5248011217625 2 525.7702514529228 MULTI CID FTMS 0 0 0 5994 108588.046875 0.6261221238312974 2 -0.0714931488037109 2 Unmodified _DAEPHQRVV_ ENSG00000196976|ENST00000357360|LAGE3 47.74868867922204 0.0453060283459952 3 {[DA]|[EG]}EPHQRVV 9 0 + 64.899 0.0 0.0 6.1837 6.1837 88.307 0.0 0.0 0.0 53.41133473038273 2.922152515121219 2.922152515121219 9.208187539523747 0 1.424742501084005 1.6989700043360187 0.5 0.0 + + {[DA]|[EG]}EPHQRVV;{[DA]|[EG]}EPH[AG]RVV;WEP{I|L}G[HN]VV;N[NS]P{I|L}G[HN]VV;WEV[PA][HN]VV;{[CT]|[{M(Oxidation (M))|F}G]}[HA]HQRVV;{[CT]|[{M(Oxidation (M))|F}G]}[TP]{M(Oxidation (M))|F}QRVV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[K{I|L}]HP[C(Carbamidomethyl (C))H];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HK]{I|L}P[C(Carbamidomethyl (C))H];{[CT]|[{M(Oxidation (M))|F}G]}[HA]H[AG]RVV 6.1837;5.3063;4.1564;2.7809;2.3237;2.0905;1.8037;1.3579;1.2363;1.2131 +;-;-;-;-;-;-;-;-;- + 185 + 1 2.281 79657.2 0.6700000166893005 1110 4884 5994 HBL1_DMSO_200M_050219_1,5996 HBL1_DMSO_200M_050219_1,5996,DAEPHQRVV True True DAEPHQRVV 30.399384 525.770251452923 4669717.5 5994.0 ENSG00000196976|ENST00000357360|LAGE3 6.1343099276224775 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5997 30.401 68.0 1153400.0 25 0 66081.0 + 5872 DPYGGHRDV 9 99 339.1576359173957 1014.4510783523872 3 339.1573669314384 MULTI CID FTMS 0 0 0 5994 724543.25 0.3559680537128396 -3 0.17669677734375 3 Unmodified _DPYGGHRDV_ ENSG00000123066|ENST00000281928|MED13L 14.218169984304629 0.4518140821082705 3 [DP]YV[RN][HD] 8 4 + 44.754 0.0 0.0 4.4117 4.4117 53.752 0.0 0.0 0.0 11.699492111829969 0.796896906561031 0.796896906561031 0.0 0 0.3054621874040891 1.6989700043360187 0.4247425010840047 0.3807196863200844 [DP]YV[RN][HD];[DP]VY[RN][HD];[DP]VY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM};[DP]YV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM};[DP]YGG[RV][HD];[DP]YN[RV][HD];[DP][KA]NGGY{[HG]|PP};[DP][KA]NNY{[HG]|PP};[DP][KA]GGGGY{[HG]|PP};[PS]{[QV]|[N{I|L}]|[RA]|[KV]}NGGY{[HG]|PP} 4.4117;4.4117;4.3331;4.3331;3.8645;3.5227;3.2584;2.9112;2.355;2.3224 -;-;-;-;-;-;-;-;-;- 207 + 1 2.281 74613.0 1.0 1111 4884 5994 HBL1_DMSO_200M_050219_1,5997 HBL1_DMSO_200M_050219_1,5997,DPYGGHRDV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5998 30.404 180.0 395200.0 25 0 12640.0 + 30298 QYQNRRAL 8 115 350.1935495853008 1047.5588193561025 3 350.1929504275322 MULTI CID FTMS 0 0 0 5994 193595.75 0.9399452500824056 -2 0.1249122619628906 4 Unmodified _QYQNRRAL_ ENSG00000114209|ENST00000392750|PDCD10 9.38312468134398 0.7673771031149565 3 QQC(Carbamidomethyl (C)){I|L} 4 5 32.089 0.0 0.0 3.0632 0.0 0.0 500.3077259748063 0.0 500.3077259748063 0.0 19.47199568799291 0.0 0.0 0 0.1171302707394362 0.0 0.0 0.5 QQC(Carbamidomethyl (C)){I|L} 3.0632 - 68 1 2.281 62636.8 1.0 1112 4884 5994 HBL1_DMSO_200M_050219_1,5998 HBL1_DMSO_200M_050219_1,5998,QYQNRRAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 5999 30.414 549.0 210590.0 25 0 22795.0 + 25352 NAPEEKASV 9 114 472.7379762714432 943.4613996096864 2 472.7379028201103 MULTI CID FTMS 0 0 0 5994 142186.9375 0.8711538286644249 -2 0.1249122619628906 5 Unmodified _NAPEEKASV_ ENSG00000120742|ENST00000239944|SERP1 39.94969957227396 0.0757326808254658 3 {[QG]|[NA]}PEE[KA]SV 9 0 + 53.144 0.0 0.0 5.6329 5.6329 84.954 0.0 0.0 0.0 4.66621474099405 0.8366748685809 0.8366748685809 8.039909026490122 0 0.4247425010840047 2.0 1.0356668758921828 0.0 + + {[QG]|[NA]}PEE[KA]SV;[EP]EKASV{[QG]|[NA]};{[QG]|[NA]}PERRCV;{[QG]|[NA]}P[WQ]{[ET]|[MV]}V;[EP]S{[VA]|[{I|L}G]}ASV{[QG]|[NA]};[EP]S[Q{I|L}]SV{[QG]|[NA]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CP]|[EA]}PSV{[QG]|[NA]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP]ASV{[QG]|[NA]};[TP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PS{[{M(Oxidation (M))|F}H]|[RQ]};[TP]D{[VA]|[{I|L}G]}ASV{[QG]|[NA]} 5.6329;4.7807;4.5698;3.8586;2.7933;2.739;2.251;2.1606;2.03;1.9881 +;-;-;-;-;-;-;-;-;- + 506 + 1 2.281 94608.3 1.0 1113 4884 5994 HBL1_DMSO_200M_050219_1,5999 HBL1_DMSO_200M_050219_1,5999,NAPEEKASV True True NAPEEKASV 30.414105 472.73790282011 1018645.0625 5994.0 ENSG00000120742|ENST00000239944|SERP1 6.491879304250081 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6001 30.428 686.0 166660.0 25 0 20647.0 + 2207 AGAAAGAGAAGAV 13 128 457.7378399015075 913.4611268698152 2 457.7381469607353 MULTI CID FTMS 0 0 0 6000 116424.828125 0.8057497997842017 1 -0.0376758575439453 1 Unmodified _AQAQAQAQV_ ENST00000487187.1_1_7:1476413-1478653:-|nuORF 64.23631603340823 0.0237365939569086 3 [QA]AGAAQ 7 3 51.858 0.0 0.0 5.677 0.0 0.0 0.0 313.1492680349431 313.1492680349431 30.43092042228011 0.0 0.0 0.0 0 0.25 0.6777807052660807 0.0 1.960409376976188 [QA]AGAAQ 5.677 - 463 1 2.281 94825.9 1.0 1114 4885 6000 HBL1_DMSO_200M_050219_1,6001 HBL1_DMSO_200M_050219_1,6001,AQAQAQAQV False False AGAAAGAGAAGAV 30.428369 457.738146960735 682368.8125 6000.0 ENST00000487187.1_1_7:1476413-1478653:-|nuORF -0.3179514209429423 2.0 False 13.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6002 30.432 188.0 797470.0 25 0 136310.0 + 21469 LPHNTHRVV 9 115 358.2052725194129 1071.5939881584388 3 358.2046386599541 MULTI CID FTMS 0 0 0 6000 404541.53125 0.2257222964788147 -10 0.3302116394042969 2 Unmodified _LPHNTHRVV_ ENSG00000197858|ENST00000355091|GPAA1;ENST00000529638.1_1_8:145140125-145141025:+|nuORF;ENST00000534072.1_1_8:145139936-145140713:+|nuORF;nc|ENSG00000197858|O43292-2|GPAA1 39.94969957227396 0.0757326808254658 3 {I|L}PHNTH 6 3 68.193 0.0 0.0 6.3637 0.0 0.0 0.0 369.2240389459594 369.2240389459594 56.20297202896872 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.4247425010840047 0.8494850021680094 + {I|L}PHNTH 6.3637 + + 139 + 1 2.281 127084.5 1.0 1115 4885 6000 HBL1_DMSO_200M_050219_1,6002 HBL1_DMSO_200M_050219_1,6002,LPHNTHRVV True True LPHNTHRVV 30.431982 358.204638659954 20499495.3125 6000.0 ENSG00000197858|ENST00000355091|GPAA1;;ENST00000534072.1_1_8:145139936-145140713:+|nuORF;;ENST00000529638.1_1_8:145140125-145141025:+|nuORF;;nc|ENSG00000197858|O43292-2|GPAA1 6.330636183420817 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6003 30.438 327.0 221300.0 25 0 7510.0 + 4072 DAMRKHPEV 9 128 361.5187475853978 1081.5344133563935 3 361.5182678103447 MULTI CID FTMS 0 0 0 6000 142876.40625 0.8980019652929192 -5 0.2403907775878906 3 Unmodified _DAMRKHPEV_ ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY 34.40172386719151 0.1061884637610825 3 [EP]VN{I|L}{[DA]|[EG]}PEV 10 7 + 29.298 0.0 0.0 2.7089 2.7089 72.73 0.0 0.0 0.0 1.0706134538055672 17.70396833585138 1.0706134538055672 3.899860438310234 0 0.7408427761594596 1.2218487496163564 0.3807196863200844 0.0 [EP]VN{I|L}{[DA]|[EG]}PEV;{[ET]|[MV]}KKDHPEV;{NN|[MP]|[D{I|L}]|[EV]}PN{I|L}WPEV;{NN|[MP]|[D{I|L}]|[EV]}NP{I|L}WPEV;{NN|[MP]|[D{I|L}]|[EV]}P[Y{I|L}]HPEV;[HT][WK]WPEV;[DP]{I|L}N{I|L}{[DA]|[EG]}PEV;{NN|[MP]|[D{I|L}]|[EV]}PN{I|L}{[DA]|[EG]}PEV;{NN|[MP]|[D{I|L}]|[EV]}PGG{I|L}WPEV;{NN|[MP]|[D{I|L}]|[EV]}NP{I|L}{[DA]|[EG]}PEV 2.7089;2.3483;2.0903;2.0171;1.7483;1.6524;1.4236;1.2389;1.2389;1.1657 -;-;-;-;-;-;-;-;-;- 434 1 2.281 66692.1 1.0 1116 4885 6000 HBL1_DMSO_200M_050219_1,6003 HBL1_DMSO_200M_050219_1,6003,DAMRKHPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6004 30.452 800.0 83211.0 25 0 3701.1 + 8799 EWFTTQSEE 9 106 578.7412954133437 1155.4680378934872 2 578.7404662966728 MULTI CID FTMS 0 0 0 6000 93084.1484375 1.0 0 0.0 4 Unmodified _EWFTTQSEE_ CON__Q9D646 36.12702656103203 0.0967173616627612 3 {[ES]|[DT]|[{I|L}C]}E[YR]QSEE 9 4 {[ES]|[DT]|[{I|L}C]}E[YR]Q + + 45.247 4.7223 0.596 3.9159 3.9159 52.297 0.0 0.0 0.0 0.0 29.96977283935577 0.0 0.0 0 0.9247425010840048 0.0 0.9802046884880936 0.0 {[ES]|[DT]|[{I|L}C]}E[YR]QSEE 3.9159 - 217 + 1 2.281 55344.1 0.5 1117 4885 6000 HBL1_DMSO_200M_050219_1,6004 HBL1_DMSO_200M_050219_1,6004,EWFTTQSEE True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 6006 30.457 60.0 869100.0 25 0 104720.0 + 24806 MPKAEKNAV 9 88 329.84792951718725 986.5219591517618 3 329.8476745486259 MULTI CID FTMS 0 0 0 6005 718086.0 0.0972139753669252 4 -0.0806312561035156 1 Unmodified _MPKAEKNAV_ ENSG00000125877|ENST00000380113|ITPA;ENST00000472295.1_1_20:3202423-3204105:+|nuORF;ENST00000490838.6_1_20:3193963-3204105:+|nuORF;nc|ENSG00000125877|Q9BY32-2|ITPA;nc|ENSG00000125877|Q9BY32-3|ITPA 18.1463463914782 0.3454829746528889 3 MPK 3 6 30.005 0.0 0.0 3.0415 0.0 0.0 0.0 627.3099436529137 627.3099436529137 17.78659694992122 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + MPK 3.0415 + + 66 + 1 2.291 47396.8 1.0 1118 4886 6005 HBL1_DMSO_200M_050219_1,6006 HBL1_DMSO_200M_050219_1,6006,MPKAEKNAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6007 30.468 622.0 190900.0 25 0 12833.0 + 24313 MDTPLPPPGRT 11 156 394.5385537162159 1180.5938317488478 3 394.5389892458916 MULTI CID FTMS 0 0 0 6005 124011.6015625 0.2022493883904422 -19 0.4558315277099609 2 Unmodified _MDTPLPPPGRT_ REV__ENSG00000164077|ENST00000296473|MON1A;REV__nc|ENSG00000164077|Q86VX9|MON1A 11.494710602746466 0.7960433852372589 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 38.81 10.974 2.5567 3.2873 3.2873 50.763 0.0 0.0 0.0 0.0 13.856807325908475 0.0 0.0 0 0.5 0.0 0.7134679910804405 0.1549471895720985 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 3.2873 - 507 + 1 2.291 97474.3 1.0 1119 4886 6005 HBL1_DMSO_200M_050219_1,6007 HBL1_DMSO_200M_050219_1,6007,MDTPLPPPGRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6009 30.472 12.0 4966200.0 25 0 764180.0 + -1 IQRLETMK 8 75 517.7865055958047 1033.5584582584092 2 517.7869140505791 MULTI CID FTMS 0 0 0 6008 5203742.5 0.0213721224241293 41 -0.6604347229003906 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 TT[{I|L}P]AE{M(Oxidation (M))|F}K 8 -1 44.206 0.0 0.0 4.2771 0.0 0.0 128.09517104316564 0.0 128.09517104316564 0.0 30.49471895720984 0.0 0.0 0 0.8807196863200843 0.0 0.805462187404089 0.0 TT[{I|L}P]AE{M(Oxidation (M))|F}K 4.2771 - 179 1 2.291 52089.9 1.0 1120 4887 6008 HBL1_DMSO_200M_050219_1,6009 HBL1_DMSO_200M_050219_1,6009,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6010 30.474 50.0 1166800.0 25 0 96537.0 + 38392 TRATPSAAFL 10 82 345.52710717968927 1033.5594921392678 3 345.5268127322197 MULTI CID FTMS 0 0 0 6008 1081861.625 0.0216894920296759 49 -0.8914756774902344 2 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 15.248480904072842 0.5916873121453583 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 25.678 13.984 3.258 2.4845 2.4845 49.36 0.0 0.0 0.0 0.0 15.417636941785116 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.2134679910804404 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.4845 - 91 + 1 2.291 57731.1 1.0 1121 4887 6008 HBL1_DMSO_200M_050219_1,6010 HBL1_DMSO_200M_050219_1,6010,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6011 30.487 800.0 293460.0 25 0 38370.0 + + 21152 LPASARKV 8 184 421.2663315023693 840.5181100715387 2 421.2660400271416 MULTI CID FTMS 0 0 0 6008 169996.46875 0.590780847138688 -5 0.2124004364013672 3 Unmodified _LPASKLRG_ chr5:163464802-163467701|38|15.39|0.68|4.5|+|0|HMMR,HMMR|1;nc|ENSG00000072571|O75330|HMMR;nc|ENSG00000072571|O75330-2|HMMR;ENST00000517936.1_1_5:162887680-162896865:+|nuORF;ENSG00000072571|ENST00000393915|HMMR;ENST00000521108.5_1_5:162887680-162891880:+|nuORF 20.453626601364224 0.6087503291685402 3 {I|L}PAS 4 -1 57.874 0.0 0.0 6.8855 0.0 0.0 0.0 469.2881563776001 469.2881563776001 39.07198489210992 0.0 0.0 0.0 0 0.6203715150305281 1.6989700043360187 0.4247425010840047 0.0 {I|L}PAS 6.8855 + + 89 + 1 2.291 181671.1 0.6299999952316284 1122 4887 6008 HBL1_DMSO_200M_050219_1,6011 HBL1_DMSO_200M_050219_1,6011,LPASKLRG False False LPASARKV 30.487492 421.2666 1541522.75 6008.0 chr5:163464802-163467701|38|15.39|0.68|4.5|+|0|HMMR,HMMR|1;;nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;ENST00000517936.1_1_5:162887680-162896865:+|nuORF;;ENSG00000072571|ENST00000393915|HMMR;;ENST00000521108.5_1_5:162887680-162891880:+|nuORF 3.6917682886123657 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6012 30.501 800.0 38626.0 25 0 4884.4 -1 0 66 704.9856487268271 2111.9351167806813 3 705.3192016482353 MULTI CID FTMS 0 0 0 6008 96563.140625 1.0 0 0.0 4 3 T 1 -1 3.9794 0.0 0.0 0.18842 0.0 0.0 1589.6834821144687 418.1854036920532 2007.8688858065216 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.18842 - 25 + 1 2.291 33752.1 0.4900000095367431 1123 4887 6008 HBL1_DMSO_200M_050219_1,6012 HBL1_DMSO_200M_050219_1,6012, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6014 30.515 629.0 116340.0 25 0 6006.9 + 36397 SYREHVKEV 9 123 382.8666970226862 1145.5782616682586 3 382.8678161501884 MULTI CID FTMS 0 0 0 6013 59716.51171875 0.6460981696918223 1 -0.0271434783935546 1 Unmodified _SYREHVKEV_ ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1 16.565877749689598 0.3882643987948875 3 V{M(Oxidation (M))|F}RVH{[RE]|[WV]}{[CT]|[{M(Oxidation (M))|F}G]} 9 6 + 50.864 0.0 0.0 4.44 4.44 71.124 0.0 0.0 0.0 16.478174818886373 0.4301089567940437 0.4301089567940437 0.4301089567940437 0 0.0 0.0 0.7742275032520141 0.4247425010840047 V{M(Oxidation (M))|F}RVH{[RE]|[WV]}{[CT]|[{M(Oxidation (M))|F}G]};V{M(Oxidation (M))|F}RVH[MT]EK;V{M(Oxidation (M))|F}RVH[MT]{[SA]|[TG]}V;V{M(Oxidation (M))|F}[VG]VH{[RE]|[WV]}{[CT]|[{M(Oxidation (M))|F}G]};V{M(Oxidation (M))|F}[VG]VH[MT]EK;V{M(Oxidation (M))|F}RVH[MT][VS]A;V{M(Oxidation (M))|F}K[YT]{[RE]|[WV]}{[CT]|[{M(Oxidation (M))|F}G]};V{M(Oxidation (M))|F}K[YT][MT]EK;[PG][PG][QA]HVREV;V{M(Oxidation (M))|F}RV[PG][HT]YA 4.44;4.4025;4.017;3.6362;3.5987;3.5829;3.3288;3.2912;3.0189;2.4891 -;-;-;-;-;-;-;-;-;- 436 + 1 2.291 68544.0 1.0 1124 4888 6013 HBL1_DMSO_200M_050219_1,6014 HBL1_DMSO_200M_050219_1,6014,SYREHVKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6015 30.528 800.0 189900.0 25 0 26213.0 + -1 HYLLLMTMK 9 119 591.3042780209505 1180.594003108701 2 591.3048583865166 MULTI CID FTMS 0 0 0 6013 168901.953125 0.3992305991706281 -11 0.3901252746582031 2 2 Oxidation (M) _HYLLLM(Oxidation (M))TM(Oxidation (M))K_ REV__ENSG00000137497|ENST00000393695|NUMA1;REV__ENST00000534971.1_1_11:71733276-71735881:-|nuORF;REV__ENST00000534987.5_1_11:71728600-71747007:-|nuORF;REV__nc|ENSG00000137497|Q14980-2|NUMA1;REV__nc|ENSG00000137497|Q14980-3|NUMA1;REV__nc|ENSG00000137497|Q14980-4|NUMA1;REV__nc|ENSG00000137497|Q14980-5|NUMA1 14.838274106304384 0.4350285940865338 3 KT{M(Oxidation (M))|F}T[{I|L}P][WP]K 9 -1 45.724 0.0 0.0 3.873 0.0 0.0 63.99823607194441 0.0 63.99823607194441 0.0 25.71893526524856 0.0 0.0 0 1.2856668758921828 0.0 1.6549471895720984 0.2215141619232908 KT{M(Oxidation (M))|F}T[{I|L}P][WP]K 3.873 - 893 + 1 2.291 116883.4 0.6399999856948853 1125 4888 6013 HBL1_DMSO_200M_050219_1,6015 HBL1_DMSO_200M_050219_1,6015,HYLLLMTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6018 30.549 800.0 35554.0 25 0 9683.7 -1 0 23 1028.080869417453 3081.22077885256 3 1028.748095691204 MULTI CID FTMS 0 0 0 6017 28854.23828125 0.242017584193897 -5 0.1183071136474609 1 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.22685 0.0 0.0 1181.3972447722838 1749.7252901666627 2931.1225349389465 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.22685 - 3 + 1 2.304 34523.7 0.6000000238418579 1126 4890 6017 HBL1_DMSO_200M_050219_1,6018 HBL1_DMSO_200M_050219_1,6018, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6019 30.562 800.0 149170.0 25 0 12976.0 + 21471 LPHNTHRVV 9 112 536.8043467827109 1071.5941406322218 2 536.8038818240166 MULTI CID FTMS 0 0 0 6017 96651.8984375 0.5591837592563046 -6 0.1521244049072265 2 Unmodified _LPHNTHRVV_ ENSG00000197858|ENST00000355091|GPAA1;ENST00000529638.1_1_8:145140125-145141025:+|nuORF;ENST00000534072.1_1_8:145139936-145140713:+|nuORF;nc|ENSG00000197858|O43292-2|GPAA1 56.17704186161178 0.0281986971544335 3 {I|L}PHNT 5 4 76.128 0.0 0.0 7.1042 0.0 0.0 0.0 506.2828768365844 506.2828768365844 63.02887198244136 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.7302046884880937 0.7614393726401688 + {I|L}PHNT 7.1042 + + 158 + 1 2.304 94192.0 0.6299999952316284 1127 4890 6017 HBL1_DMSO_200M_050219_1,6019 HBL1_DMSO_200M_050219_1,6019,LPHNTHRVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6021 30.576 631.0 198250.0 25 0 16706.0 + 45153 YQEKSPREV 9 153 379.19648370621104 1134.5676217188332 3 379.1958495974541 MULTI CID FTMS 0 0 0 6020 122033.2734375 1.0 0 0.0 1 Unmodified _YQEKSPREV_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 5.296884461304476 0.7297726132274777 3 KS 2 7 14.776 0.0 0.0 1.3024 0.0 0.0 420.16559642762064 496.2523486977378 916.4179451253584 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + KS 1.3024 + + 211 + 1 2.304 103123.4 1.0 1128 4891 6020 HBL1_DMSO_200M_050219_1,6021 HBL1_DMSO_200M_050219_1,6021,YQEKSPREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6022 30.59 800.0 158380.0 25 0 19753.0 + -1 QSKQQLVMK 9 114 553.3050935167402 1104.5956341002802 2 553.3053466677666 MULTI CID FTMS 0 0 0 6020 100561.28125 0.231133051220222 -23 0.5628662109375 2 Oxidation (M) _QSKQQLVM(Oxidation (M))K_ REV__ENSG00000151490|ENST00000281171|PTPRO;REV__nc|ENSG00000151490|Q16827-2|PTPRO;REV__nc|ENSG00000151490|Q16827-3|PTPRO;REV__nc|ENSG00000151490|Q16827-4|PTPRO 22.736283301280096 0.2418982879461534 3 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 45.664 0.0 0.0 4.134 4.134 83.799 0.0 0.0 0.0 0.7378621416091846 23.268696479293496 0.7378621416091846 15.00045229586355 0 1.3494850021680094 0.0 1.079689690656103 0.0 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[{I|L}P][RD]{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]TT{[CA]|SS};[KT][RD][{I|L}P]GV[YG];[KT]T[PA][{I|L}A]T[R{M(Oxidation (M))|F}];[KT][RD][RH][RH];[KT]T[{I|L}P]AAT[R{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]GV[YG] 4.134;2.776;2.5474;2.3744;1.6018;0.83275;0.67578;0.2877;0.2438 -;-;-;-;-;-;-;-;- 350 1 2.304 99554.5 0.5 1129 4891 6020 HBL1_DMSO_200M_050219_1,6022 HBL1_DMSO_200M_050219_1,6022,QSKQQLVMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6023 30.604 800.0 92376.0 25 0 6078.5 -1 0 70 577.7011023951944 2883.469129642972 5 578.1027099490166 MULTI CID FTMS 0 0 0 6020 64015.5234375 0.413367824091684 -10 0.358957290649414 3 3 {[YC]|[HE]}[QT]AQ{[QG]|[NA]}E 9 -1 17.399 0.0 0.0 0.60341 0.0 0.0 0.0 1872.0419805553345 1872.0419805553345 6.162056993954867 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3252574989159953 0.0 {[YC]|[HE]}[QT]AQ{[QG]|[NA]}E 0.60341 - 75 1 2.304 65488.1 0.4199999868869781 1130 4891 6020 HBL1_DMSO_200M_050219_1,6023 HBL1_DMSO_200M_050219_1,6023, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6026 30.612 133.0 530320.0 25 0 62988.0 + 5871 DPYGGHRDV 9 77 508.2333088588673 1014.4520647845344 2 508.2334472537041 MULTI CID FTMS 0 0 0 6025 667092.125 0.3728454399496085 6 -0.0506649017333984 1 Unmodified _DPYGGHRDV_ ENSG00000123066|ENST00000281928|MED13L 37.77132515983256 0.0876909340306915 3 DPYGGHK{[QN]|[E{I|L}]|[KN]} 9 3 + 73.611 0.0 0.0 7.2562 7.2562 88.54 0.0 0.0 0.0 42.49159686636801 4.762036441594191 4.762036441594191 6.478174818886373 0 0.7742275032520141 1.6989700043360187 0.0 0.3807196863200844 DPYGGHK{[QN]|[E{I|L}]|[KN]};DPYNHK{[QN]|[E{I|L}]|[KN]};DPYGG[RV][HD];DPYV[RN][HD];DPYN[RV][HD];DPVY[RN][HD];V[{M(Oxidation (M))|F}E]GGHK{[QN]|[E{I|L}]|[KN]};V[{M(Oxidation (M))|F}E]NHK{[QN]|[E{I|L}]|[KN]};DV{[MS]|[{M(Oxidation (M))|F}A]}GHK{[QN]|[E{I|L}]|[KN]};DVPY[RN][HD] 7.2562;6.6176;6.0014;5.4647;5.3628;4.7449;3.3144;2.6758;2.5946;2.3547 -;-;-;-;-;-;-;-;-;- 191 + 1 2.304 61679.6 1.0 1131 4893 6025 HBL1_DMSO_200M_050219_1,6026 HBL1_DMSO_200M_050219_1,6026,DPYGGHRDV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6027 30.626 800.0 136090.0 25 0 26311.0 + 30511 REHSNVPA 8 125 455.23012404193145 908.4456951506628 2 455.2302429080009 MULTI CID FTMS 0 0 0 6025 92191.984375 0.8794856243142395 -2 0.0447368621826171 2 Unmodified _REHSNVPA_ REV__ENSG00000183873|ENST00000423572|SCN5A;REV__nc|ENSG00000183873|Q14524-3|SCN5A;REV__nc|ENSG00000183873|Q14524-4|SCN5A;REV__nc|ENSG00000183873|Q14524-5|SCN5A;REV__nc|ENSG00000183873|Q14524-6|SCN5A;REV__nc|ENSG00000183873|Q14524|SCN5A 10.823927491677226 0.7510103885582552 3 {[RE]|[WV]}Q{M(Oxidation (M))|F}{[CA]|SS}R 7 -1 + 25.462 0.0 0.0 2.8028 2.8028 80.497 0.0 0.0 0.0 3.67046012758685 11.72122282337696 3.67046012758685 13.802112417116062 0 1.4419628234359578 0.0 0.3807196863200844 0.0 {[RE]|[WV]}Q{M(Oxidation (M))|F}{[CA]|SS}R;[PG]D[RP][DP]R 2.8028;1.2835 -;- 126 1 2.304 87249.3 0.6000000238418579 1132 4893 6025 HBL1_DMSO_200M_050219_1,6027 HBL1_DMSO_200M_050219_1,6027,REHSNVPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6033 30.658 800.0 96862.0 25 0 11150.0 + 34748 SQADRPHQL 9 117 526.2678860042515 1050.521219075303 2 526.2671386599541 MULTI CID FTMS 0 0 0 6032 69850.421875 0.7525401907717589 1 -0.0161933898925781 1 Unmodified _SQADRPHQL_ ENSG00000143368|ENST00000271628|SF3B4 37.07464296494664 0.0915153923251136 3 NADR{M(Oxidation (M))|F}SQ{I|L} 8 4 32.747 0.0 0.0 3.1172 0.0 0.0 101.0479984967789 0.0 101.0479984967789 0.0 14.96844016649533 0.0 0.0 0 1.5682503180159344 0.0 0.0 0.5451140161145328 NADR{M(Oxidation (M))|F}SQ{I|L} 3.1172 - 214 1 2.312 63539.1 0.6399999856948853 1133 4898 6032 HBL1_DMSO_200M_050219_1,6033 HBL1_DMSO_200M_050219_1,6033,SQADRPHQL True True SQADRPHQL 30.657926 526.267138659954 1610459.375 6032.0 ENSG00000143368|ENST00000271628|SF3B4 6.938218752543132 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6035 30.663 131.0 511670.0 25 0 39544.0 + 5873 DPYGGHRDV 9 94 339.1576359173957 1014.4510783523872 3 339.1572143435478 MULTI CID FTMS 0 0 0 6034 337197.40625 0.1656650647422775 12 -0.2244796752929687 1 Unmodified _DPYGGHRDV_ ENSG00000123066|ENST00000281928|MED13L 9.764250979337303 0.5738191136577565 3 DPYGGH 6 3 52.115 0.0 0.0 5.1373 0.0 0.0 0.0 385.1836641901001 385.1836641901001 48.13608784304506 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + DPYGGH 5.1373 + + 211 + 1 2.312 60003.2 1.0 1134 4899 6034 HBL1_DMSO_200M_050219_1,6035 HBL1_DMSO_200M_050219_1,6035,DPYGGHRDV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6036 30.677 800.0 119650.0 25 0 13107.0 + -1 REAGIITTKM 10 115 568.3113120358297 1134.6080711384593 2 568.3121826052666 MULTI CID FTMS 0 0 0 6034 105041.7734375 0.5825814420903861 -1 0.0161933898925781 2 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENST00000591437.5_1_17:75196686-75199708:+|nuORF 26.268140514670165 0.1969607489560049 3 KTTT[{I|L}P][WP]K 9 -1 55.91 0.0 0.0 4.9277 0.0 0.0 63.99968630835162 0.0 63.99968630835162 0.0 23.481875743283453 0.0 0.0 0 1.6549471895720984 0.0 1.7302046884880935 0.2215141619232908 KTTT[{I|L}P][WP]K 4.9277 - 572 + 1 2.312 77706.9 0.5099999904632568 1135 4899 6034 HBL1_DMSO_200M_050219_1,6036 HBL1_DMSO_200M_050219_1,6036,EKKLQNTMK False False REAGIITTKM 30.676791 568.312182605267 9864624.0 6034.0 ENST00000591437.5_1_17:75196686-75199708:+|nuORF 2.5494072437286377 2.0 False 10.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6039 30.685 43.0 1477800.0 25 0 124490.0 + 21470 LPHNTHRVV 9 72 358.2052725194129 1071.5939881584388 3 358.2048828005791 MULTI CID FTMS 0 0 0 6038 1007435.625 0.562119498897729 6 -0.1288604736328125 1 Unmodified _LPHNTHRVV_ ENSG00000197858|ENST00000355091|GPAA1;ENST00000529638.1_1_8:145140125-145141025:+|nuORF;ENST00000534072.1_1_8:145139936-145140713:+|nuORF;nc|ENSG00000197858|O43292-2|GPAA1 32.78568957990786 0.1150597335874693 3 {I|L}PHNTH 6 3 69.078 0.0 0.0 6.4463 0.0 0.0 0.0 369.22547084482096 369.22547084482096 58.10886448696975 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.805462187404089 + {I|L}PHNTH 6.4463 + + 79 + 1 2.312 61721.5 1.0 1136 4901 6038 HBL1_DMSO_200M_050219_1,6039 HBL1_DMSO_200M_050219_1,6039,LPHNTHRVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6040 30.699 800.0 376860.0 25 0 19782.0 + 11644 GLASRPGHEQ 10 281 351.1812316161041 1050.5218654485125 3 351.1806518435478 MULTI CID FTMS 0 0 0 6038 164312.0 0.5050587192582511 4 -0.064584732055664 2 Unmodified _GLASRPGHEQ_ REV__ENSG00000136274|ENST00000490531|NACAD 19.256988751693697 0.5244284437930726 3 [RH]GEA{I|L}TA 8 -1 28.228 0.0 0.0 2.6871 0.0 0.0 0.0 212.0690576753153 212.0690576753153 8.81834282656262 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.6747425010840047 [RH]GEA{I|L}TA 2.6871 - 2361 1 2.312 239400.9 0.7099999785423279 1137 4901 6038 HBL1_DMSO_200M_050219_1,6040 HBL1_DMSO_200M_050219_1,6040,GLASRPGHEQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6043 30.72 800.0 224020.0 25 0 12669.0 + 24091 LYHLLVSFSG 10 189 379.20910821798935 1134.605495254168 3 379.2090942263603 MULTI CID FTMS 0 0 0 6042 57951.171875 0.4592519636654941 -1 0.0040321350097656 1 Unmodified _LYHLLVSFSG_ REV__ENSG00000228567|ENST00000311170|VN1R4 6.1918466704503565 0.6979955778746556 3 T 1 -1 13.227 0.0 0.0 1.1658 0.0 0.0 705.3720941534172 325.1628394459052 1030.5349335993224 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 T 1.1658 - 327 + 1 2.312 144992.8 0.6000000238418579 1138 4903 6042 HBL1_DMSO_200M_050219_1,6043 HBL1_DMSO_200M_050219_1,6043,LYHLLVSFSG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6044 30.734 800.0 138320.0 25 0 13307.0 + 2457 AQVPSSEQA 9 139 458.7220429933336 915.4295330534673 2 458.7224609255791 MULTI CID FTMS 0 0 0 6042 109270.140625 0.9312523661528188 -1 0.0040321350097656 2 Unmodified _AQVPSSEQA_ ENSG00000178971|ENST00000651323|CTC1;nc|ENSG00000178971|Q2NKJ3-2|CTC1 34.10243960390752 0.1078313939113124 3 [AG]AVDDA 7 7 26.297 0.0 0.0 2.8727 0.0 0.0 0.0 313.15234734473603 313.15234734473603 13.774326607348176 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3494850021680094 0.0 [AG]AVDDA 2.8727 - 289 1 2.312 87868.8 0.6299999952316284 1139 4903 6042 HBL1_DMSO_200M_050219_1,6044 HBL1_DMSO_200M_050219_1,6044,AQVPSSEQA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6046 30.738 21.0 2943700.0 25 0 491120.0 + -1 IQRLETMK 8 64 517.7865055958047 1033.5584582584092 2 517.7868530154228 MULTI CID FTMS 0 0 0 6045 2913518.25 0.0119660165205974 58 -1.8116989135742188 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 KTT[{I|L}P][WP]K 8 -1 50.724 0.0 0.0 4.9077 0.0 0.0 63.998848165461546 0.0 63.998848165461546 0.0 31.607281392838825 0.0 0.0 0 1.6549471895720984 0.0 1.3494850021680094 0.3054621874040891 KTT[{I|L}P][WP]K 4.9077 - 137 + 1 2.312 53797.9 1.0 1140 4904 6045 HBL1_DMSO_200M_050219_1,6046 HBL1_DMSO_200M_050219_1,6046,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6047 30.74 104.0 559720.0 25 0 59510.0 + -1 HYLLLMTMK 9 84 394.5385537162159 1180.5938317488478 3 394.5383788943291 MULTI CID FTMS 0 0 0 6045 609660.0625 0.9942890279064794 -1 0.0300273895263671 2 2 Oxidation (M) _HYLLLM(Oxidation (M))TM(Oxidation (M))K_ REV__ENSG00000137497|ENST00000393695|NUMA1;REV__ENST00000534971.1_1_11:71733276-71735881:-|nuORF;REV__ENST00000534987.5_1_11:71728600-71747007:-|nuORF;REV__nc|ENSG00000137497|Q14980-2|NUMA1;REV__nc|ENSG00000137497|Q14980-3|NUMA1;REV__nc|ENSG00000137497|Q14980-4|NUMA1;REV__nc|ENSG00000137497|Q14980-5|NUMA1 8.444304893310646 0.6198977621250997 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 36.772 15.674 3.6517 3.1147 3.1147 50.434 0.0 0.0 0.0 0.0 11.744365433688468 0.0 0.0 0 0.8252574989159953 0.0 0.7302046884880937 0.1989700043360188 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 3.1147 - 230 + 1 2.312 59694.3 1.0 1141 4904 6045 HBL1_DMSO_200M_050219_1,6047 HBL1_DMSO_200M_050219_1,6047,HYLLLMTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6048 30.742 80.0 701930.0 25 0 36548.0 + 38393 TRATPSAAFL 10 94 345.52710717968927 1033.5594921392678 3 345.5267516970634 MULTI CID FTMS 0 0 0 6045 697449.3125 0.0139826766704769 66 -2.039203643798828 3 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 15.248480904072842 0.5916873121453583 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 25.616 15.234 3.5491 2.4784 2.4784 49.344 0.0 0.0 0.0 0.0 13.22547479918378 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.1203715150305281 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.4784 - 92 + 1 2.312 53666.6 1.0 1142 4904 6045 HBL1_DMSO_200M_050219_1,6048 HBL1_DMSO_200M_050219_1,6048,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6049 30.745 151.0 597500.0 25 0 58456.0 + 4293 DARHAIKKI 9 122 351.21855417839333 1050.63383313538 3 351.2185851931572 MULTI CID FTMS 0 0 0 6045 184588.0625 0.2610122780741782 -4 0.0568370819091796 4 Unmodified _DARHAIKKI_ ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12 20.871137199558856 0.271726097625075 3 [RH]GEA{I|L}K 7 6 28.122 0.0 0.0 2.6767 0.0 0.0 0.0 256.16973372972456 256.16973372972456 6.862591709212182 0.0 0.0 0.0 0 0.4802046884880938 0.0 0.0 0.0 [RH]GEA{I|L}K 2.6767 - 372 1 2.312 73559.8 1.0 1143 4904 6045 HBL1_DMSO_200M_050219_1,6049 HBL1_DMSO_200M_050219_1,6049,DARHAIKKI False True DARHAIKKI 30.745232 351.218585193157 5425486.0 6045.0 ENSG00000184634|ENST00000374080|MED12;;nc|ENSG00000184634|Q93074-2|MED12;;nc|ENSG00000184634|Q93074-3|MED12 1.4968413511912029 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6051 30.761 800.0 112510.0 25 0 8795.7 -1 0 99 577.7011023951944 2883.469129642972 5 578.3023559451103 MULTI CID FTMS 0 0 0 6050 48182.8984375 0.4101030502265956 1 -0.0450077056884765 1 3 {[YC]|[HE]}ASAAQ{[QG]|[NA]}EY 11 -1 44.812 0.0 0.0 1.5541 0.0 0.0 0.0 1708.938342860022 1708.938342860022 29.59538154628021 0.0 0.0 0.0 0 0.0 1.154901959985743 1.581883171732979 0.4247425010840047 {[YC]|[HE]}ASAAQ{[QG]|[NA]}EY 1.5541 - 375 1 2.312 75316.2 0.5299999713897705 1144 4905 6050 HBL1_DMSO_200M_050219_1,6051 HBL1_DMSO_200M_050219_1,6051, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6052 30.765 209.0 379220.0 25 0 57079.0 -1 0 115 337.0543319354858 2352.3293882822004 7 337.1974975466728 MULTI CID FTMS 0 0 0 6050 166904.6875 0.8340630086547536 2 -0.0642757415771484 2 3 [DV][KT]M 5 -1 11.963 0.0 0.0 0.50855 0.0 0.0 0.0 1775.018694272688 1775.018694272688 0.5427416021006515 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [DV][KT]M 0.50855 - 181 1 2.312 69342.9 1.0 1145 4905 6050 HBL1_DMSO_200M_050219_1,6052 HBL1_DMSO_200M_050219_1,6052, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6053 30.776 628.0 197700.0 25 0 29611.0 + 42279 VSQNLEEK 8 130 473.7459271508256 945.4773013684512 2 473.7457763552666 MULTI CID FTMS 0 0 0 6050 160444.859375 0.9311369315149732 -2 0.0417156219482421 3 Unmodified _VSQNLEEK_ REV__ENSG00000046651|ENST00000340096|OFD1;REV__ENST00000490265.5_1_X:13771424-13787224:+|nuORF;REV__nc|ENSG00000046651|O75665-3|OFD1 36.12702656103203 0.299085846329477 3 [VS]QVDAAEK 9 -1 + 90.537 0.0 0.0 9.5758 9.5758 94.832 0.0 0.0 0.0 68.36652776891924 14.786440794824216 14.786440794824216 9.208187539523747 0 0.805462187404089 2.0 0.9247425010840048 0.5610312860818771 [VS]QVDAAEK;[VS][AG]VDAAEK;[VS]QVDAAASV;[VS]Q{[RE]|[WV]}AEK;[VS]QVD[DV]GK;[VS][AG]VDAAASV;[VS]QVDA{[TV]|[{I|L}S]}Q;[VS]QVDA[QT]V;[VS][AG]{[RE]|[WV]}AEK;[VS][AG]VD[DV]GK 9.5758;8.6019;7.8958;7.2258;7.1355;6.5238;6.4434;6.3394;6.2462;6.1616 -;-;-;-;-;-;-;-;-;- 784 + 1 2.312 101560.8 1.0 1146 4905 6050 HBL1_DMSO_200M_050219_1,6053 HBL1_DMSO_200M_050219_1,6053,VSQNLEEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6054 30.79 800.0 255050.0 25 0 16055.0 -1 AYRMFTNNTC 10 184 412.842506577189 1235.505690331767 3 412.8419067263603 MULTI CID FTMS 0 0 0 6050 84032.015625 0.0252209528552372 -12 0.1380348205566406 4 Oxidation (M) _AYRM(Oxidation (M))FTNNTC_ ENSG00000138411|ENST00000644978|HECW2 5.40270961882225 0.7016457984575614 3 PYDKNHQ{I|L} 8 -1 53.204 0.0 0.0 4.3062 0.0 0.0 222.012377218428 0.0 222.012377218428 0.0 24.404175644202333 0.0 0.0 0 0.25 0.0 0.0 2.385151878060192 PYDKNHQ{I|L} 4.3062 - 2707 + 1 2.312 162993.8 0.4199999868869781 1147 4905 6050 HBL1_DMSO_200M_050219_1,6054 HBL1_DMSO_200M_050219_1,6054,AYRMFTNNTC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6056 30.797 181.0 326830.0 25 0 47247.0 + -1 KTGKYFYMK 9 69 591.3042780209505 1180.594003108701 2 591.3046752810478 MULTI CID FTMS 0 0 0 6055 317598.4375 0.7507018844532991 7 -0.112152099609375 1 Oxidation (M) _KTGKYFYM(Oxidation (M))K_ REV__ENST00000371432.7_1_6:45515222-45515519:+|nuORF 9.38312468134398 0.5871240394367778 3 T{M(Oxidation (M))|F}K[HV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 8 -1 32.128 0.0 0.0 2.7213 0.0 0.0 128.09520156074376 0.0 128.09520156074376 0.0 15.22160958700539 0.0 0.0 0 0.7429928190999391 0.0 0.3807196863200844 0.0 T{M(Oxidation (M))|F}K[HV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 2.7213 - 262 1 2.33 49633.0 1.0 1148 4906 6055 HBL1_DMSO_200M_050219_1,6056 HBL1_DMSO_200M_050219_1,6056,KTGKYFYMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6057 30.803 312.0 353190.0 25 0 23188.0 + 917 AFAHHGRSL 9 114 332.5107155742276 994.5103173228828 3 332.5099975466728 MULTI CID FTMS 0 0 0 6055 206176.578125 0.4546972653658842 -4 0.0907554626464843 2 Unmodified _AFAHHGRSL_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;nc|ENSG00000137265|Q15306-2|IRF4 20.41453444215458 0.284085796332423 3 A{M(Oxidation (M))|F}AHHV 6 4 45.394 0.0 0.0 4.5644 0.0 0.0 0.0 329.1496676080688 329.1496676080688 24.936237904918173 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 A{M(Oxidation (M))|F}AHHV 4.5644 - 140 + 1 2.33 91787.2 1.0 1149 4906 6055 HBL1_DMSO_200M_050219_1,6057 HBL1_DMSO_200M_050219_1,6057,AFAHHGRSL False True AFAHHGRSL 30.803188 332.509997546673 2029279.5 6055.0 nc|ENSG00000137265|Q15306-2|IRF4;;ENSG00000137265|ENST00000380956|IRF4;;chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4 5.769657452901204 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6058 30.81 353.0 382860.0 25 0 67958.0 44039 YIKTHLPF 8 140 340.19625617928415 0 340.1962158083916 PEAK CID FTMS 0 0 0 6055 146010.40625 0.5481519901180121 -13 0.1830425262451172 3 Unmodified _YIKTHLPF_ ENSG00000155754|ENST00000439140|C2CD6 2.889219685676258 0.5898224805723975 3 {I|L} 1 7 4.6041 0.0 0.0 0.67869 0.0 0.0 430.2254000765386 132.04561792545158 562.2710180019902 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.67869 + + 4 + 1 2.33 110383.6 1.0 1150 4906 6055 HBL1_DMSO_200M_050219_1,6058 HBL1_DMSO_200M_050219_1,6058,YIKTHLPF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6060 30.826 800.0 235280.0 25 0 67731.0 + 35161 SRQFSSRSG 9 135 527.2573617681617 1052.5001706031233 2 527.2570678591728 MULTI CID FTMS 0 0 0 6059 205621.8125 0.599021304186095 -6 0.1288604736328125 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SRQFSSRSG_ CON__P04264;ENSG00000167768|ENST00000252244|KRT1 68.75988807550267 0.0215783377819135 3 {[RE]|[WV]}Q{M(Oxidation (M))|F}SSRSG 9 1 + 63.554 0.0 0.0 6.0384 6.0384 87.86 0.0 0.0 0.0 3.5121967796476383 38.10402823752675 3.5121967796476383 9.208187539523747 0 2.1989700043360187 0.0 0.3807196863200844 0.9163865622122672 {[RE]|[WV]}Q{M(Oxidation (M))|F}SSRSG;{[RE]|[WV]}[AG]{M(Oxidation (M))|F}SSRSG;{[RE]|[WV]}Q{M(Oxidation (M))|F}SS[VG]SG;VVCS[TA]SSRSG;{[RE]|[WV]}[AG]{M(Oxidation (M))|F}SS[VG]SG;{[RE]|[WV]}Q{M(Oxidation (M))|F}SS[TA]Q;{[RE]|[WV]}Q{M(Oxidation (M))|F}SS[TA]AG;[AG]{[RE]|[WV]}{M(Oxidation (M))|F}SSRSG;{[RE]|[WV]}[AG]{M(Oxidation (M))|F}SS[TA]Q;{[RE]|[WV]}[AG]{M(Oxidation (M))|F}SS[TA]AG 6.0384;5.1635;5.1635;4.9228;4.2928;4.2272;4.1837;3.3884;3.3523;3.313 -;-;-;-;-;-;-;-;-;- 878 1 2.33 146946.4 0.5400000214576721 1151 4907 6059 HBL1_DMSO_200M_050219_1,6060 HBL1_DMSO_200M_050219_1,6060,SRQFSSRSG True False SRQFSSRSG 30.825765 527.257067859173 1642113.0 6059.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 7.971224149068196 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 6061 30.83 239.0 204730.0 25 0 8759.7 + -1 DMMNGQFHQL 10 89 618.7601724727991 1235.5057920123982 2 618.7606689333916 MULTI CID FTMS 0 0 0 6059 230660.0 0.2193659443548885 -8 0.1516456604003906 2 Oxidation (M) _DMM(Oxidation (M))NGQFHQL_ REV__ENSG00000183495|ENST00000389561|EP400;REV__nc|ENSG00000183495|Q96L91-3|EP400;REV__nc|ENSG00000183495|Q96L91-4|EP400;REV__nc|ENSG00000183495|Q96L91-5|EP400;REV__nc|ENSG00000183495|Q96L91|EP400;REV__nc|ENSG00000185684|Q6ZTU2-2|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-4|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-5|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-6|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2|EP400P1 12.240655878213236 0.6421556946785427 3 PYDKNHQ{I|L} 8 -1 59.42 0.0 0.0 4.8094 0.0 0.0 222.0117153314655 0.0 222.0117153314655 0.0 34.20340359426696 0.0 0.0 0 2.018930178484529 0.0 0.0 1.7658715643802765 PYDKNHQ{I|L} 4.8094 - 303 + 1 2.33 42824.5 1.0 1152 4907 6059 HBL1_DMSO_200M_050219_1,6061 HBL1_DMSO_200M_050219_1,6061,DMMNGQFHQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6063 30.837 223.0 282380.0 25 0 39003.0 -1 KSPIRETMK 9 85 553.3050935167402 1104.5956341002802 2 553.3055908083916 MULTI CID FTMS 0 0 0 6062 255051.21875 0.5862173360795739 -6 0.1306610107421875 1 Oxidation (M) _KSPIRETM(Oxidation (M))K_ ENSG00000151849|ENST00000381884|CENPJ;nc|ENSG00000151849|Q9HC77-2|CENPJ 20.41453444215458 0.284085796332423 3 [KT][RD][{I|L}P]TTK 9 -1 45.422 0.0 0.0 4.1121 0.0 0.0 0.0 60.974682803902994 60.974682803902994 27.32325282109926 0.0 0.0 0.0 0 1.3807196863200843 0.0 2.024227503252014 0.0 [KT][RD][{I|L}P]TTK 4.1121 - 251 1 2.33 57477.3 1.0 1153 4908 6062 HBL1_DMSO_200M_050219_1,6063 HBL1_DMSO_200M_050219_1,6063,KSPIRETMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6064 30.841 229.0 426970.0 25 0 62291.0 -1 0 116 339.19209519185523 676.3696374505105 2 339.1911193728447 MULTI CID FTMS 0 0 0 6062 155891.1875 0.9101082310632128 -3 0.0849132537841796 2 3 [KT][TA]EK 6 -1 [KT][TA]E + + 10.063 -7.9486 -1.499 1.4879 1.4879 48.526 0.0 0.0 0.0 0.0 -6.156331591992117 -6.156331591992117 0.0 0 0.0 0.0 0.0 0.0731074559755159 [KT][TA]EK 1.4879 - 47 + 1 2.33 78121.5 1.0 1154 4908 6062 HBL1_DMSO_200M_050219_1,6064 HBL1_DMSO_200M_050219_1,6064, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6065 30.851 549.0 254060.0 25 0 32572.0 44173 YLEERHRH 8 147 380.52810421571 1138.56248324733 3 380.5273925662041 MULTI CID FTMS 0 0 0 6062 137398.234375 0.5331469534276183 -2 0.0399055480957031 3 Unmodified _YLEERHRH_ ENSG00000171793|ENST00000650070|CTPS1;nc|ENSG00000171793|P17812-2|CTPS1 32.78568957990786 0.3549862272178655 3 YE{I|L} 3 6 50.49 0.0 0.0 4.4345 0.0 0.0 0.0 730.3500475390701 730.3500475390701 26.760912590556813 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.4247425010840047 0.0 YE{I|L} 4.4345 - 508 + 1 2.33 114037.5 1.0 1155 4908 6062 HBL1_DMSO_200M_050219_1,6065 HBL1_DMSO_200M_050219_1,6065,YLEERHRH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6066 30.861 587.0 309650.0 25 0 35759.0 10974 GAQGGPPV 8 181 341.679272229308 0 341.6793395876884 PEAK CID FTMS 0 0 0 6062 106433.1640625 0.8127334339905483 1 -0.0307559967041015 4 Unmodified _GAQGGPPV_ ENSG00000137337|ENST00000376406|MDC1;nc|ENSG00000137337|Q14676-2|MDC1;nc|ENSG00000137337|Q14676-3|MDC1;nc|ENSG00000137337|Q14676-4|MDC1 2.889219685676258 0.5898224805723975 3 E 1 8 5.3786 0.0 0.0 0.78941 0.0 0.0 467.2120620593988 82.06683527164296 549.2788973310417 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E 0.78941 - 54 + 1 2.33 149650.6 1.0 1156 4908 6062 HBL1_DMSO_200M_050219_1,6066 HBL1_DMSO_200M_050219_1,6066,GAQGGPPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6068 30.879 800.0 64662.0 25 0 3585.8 43249 WEECSSWYYYV 11 93 757.7983497538004 1513.582146574401 2 758.2989379763603 MULTI CID FTMS 0 0 0 6067 94531.6953125 0.9551934293106116 -3 0.0706615447998046 1 Unmodified _WEECSSWYYYV_ ENSG00000148120|ENST00000375315|AOPEP;nc|ENSG00000148120|Q8N6M6-2|AOPEP;nc|ENSG00000148120|Q8N6M6-3|AOPEP;nc|ENSG00000148120|Q8N6M6-4|AOPEP 5.296884461304476 0.8501568894076437 3 [SG]NG{M(Oxidation (M))|F}GNGNSGYS 13 12 62.711 0.0 0.0 4.1432 0.0 0.0 0.0 312.1036453732358 312.1036453732358 24.87714721015871 0.0 0.0 0.0 0 0.0 0.0 2.3169015600442577 0.6382104921644451 [SG]NG{M(Oxidation (M))|F}GNGNSGYS 4.1432 - 5583 1 2.339 43425.6 0.4600000083446502 1157 4909 6067 HBL1_DMSO_200M_050219_1,6068 HBL1_DMSO_200M_050219_1,6068,WEECSSWYYYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6071 30.899 800.0 210950.0 25 0 38224.0 + 18104 KTLDQAKAV 9 164 487.28873545215816 972.5629179711163 2 487.2887451052666 MULTI CID FTMS 0 0 0 6070 128983.6953125 0.586486755311534 -6 0.1371097564697265 1 Unmodified _KTLDQAKAV_ ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10 62.86856922530385 0.024493861581232 3 {[DA]|[EG]}Q{I|L}TKKAV 9 6 + 61.852 0.0 0.0 6.3597 6.3597 78.959 0.0 0.0 0.0 6.289263886741715 31.639647539205058 6.289263886741715 1.249387366082999 0 1.2887254899964358 1.0457574905606752 0.5649093276264391 0.3807196863200844 {[DA]|[EG]}Q{I|L}TKKAV;{[DA]|[EG]}{I|L}QTKKAV;{[DA]|[EG]}GA{I|L}TKKAV;{[DA]|[EG]}{I|L}GATKKAV;{[DA]|[EG]}G{I|L}ATKKAV;{[DA]|[EG]}Q{I|L}TKAKV;{[DA]|[EG]}GA{I|L}TKAKV;{[DA]|[EG]}{I|L}QTKAKV;{[DA]|[EG]}{I|L}GATKAKV;{[DA]|[EG]}{I|L}G[KT]AKAV 6.3597;6.2313;6.2313;6.1842;6.0032;5.9728;5.8444;5.8444;5.7973;5.6978 -;-;-;-;-;-;-;-;-;- 2661 1 2.339 130198.7 0.6299999952316284 1158 4911 6070 HBL1_DMSO_200M_050219_1,6071 HBL1_DMSO_200M_050219_1,6071,KTLDQAKAV True True KTLDQAKAV 30.898581 487.288745105267 719721.0625 6070.0 ENSG00000135372|ENST00000257829|NAT10;;nc|ENSG00000135372|Q9H0A0-2|NAT10 3.934427817662557 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6074 30.919 800.0 141250.0 25 0 13760.0 + 26699 NYNTGRSV 8 133 455.7221674943751 909.4297820555504 2 455.7215148806572 MULTI CID FTMS 0 0 0 6073 183849.15625 0.6309034060918833 -4 0.0414905548095703 1 Unmodified _NYNTGRSV_ ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5 39.957323273325 0.2350051964751539 3 [YN]NT 4 4 49.079 0.0 0.0 5.3967 0.0 0.0 0.0 414.21068816182014 414.21068816182014 35.980012143586684 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5891368308784531 0.4247425010840047 + [YN]NT 5.3967 + + 180 + 1 2.339 92387.0 0.699999988079071 1159 4913 6073 HBL1_DMSO_200M_050219_1,6074 HBL1_DMSO_200M_050219_1,6074,NYNTGRSV False True NYNTGRSV 30.918631 455.721514880657 1294265.75 6073.0 nc|ENSG00000084693|Q8NDL9-3|AGBL5;;ENSG00000084693|ENST00000360131|AGBL5;;nc|ENSG00000084693|Q8NDL9-2|AGBL5 3.9484825134277344 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6077 30.939 800.0 204850.0 25 0 33338.0 + 43181 YVKDRVEKV 9 165 379.2216119454063 1134.6430064364188 3 379.2209350466728 MULTI CID FTMS 0 0 0 6076 71621.3203125 0.6269143050689734 -1 0.0037307739257812 1 Unmodified _VYVKDDKIR_ ENSG00000057608|ENST00000380191|GDI2;nc|ENSG00000057608|P50395-2|GDI2 20.41453444215458 0.284085796332423 3 YVVK 4 6 43.532 0.0 0.0 3.8366 0.0 0.0 0.0 642.3175142877561 642.3175142877561 31.313506577119625 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 YVVK 3.8366 - 251 + 1 2.339 131624.8 0.5600000023841858 1160 4915 6076 HBL1_DMSO_200M_050219_1,6077 HBL1_DMSO_200M_050219_1,6077,VYVKDDKIR False False YVKDRVEKV 30.938539 379.220935046673 834674.8125 6076.0 ENSG00000057608|ENST00000380191|GDI2;;nc|ENSG00000057608|P50395-2|GDI2 1.84525935848554 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6078 30.952 800.0 136550.0 25 0 12930.0 43729 YDHVHPVGAFC 11 147 415.5228871850797 1243.546832155439 3 415.8571044802666 MULTI CID FTMS 0 0 0 6076 79193.296875 1.0 0 0.0 2 Unmodified _YDHVHPVGAFC_ ENSG00000197872|ENST00000381323|CYRIA 5.047519993296601 0.8513334072183365 3 {[{M(Oxidation (M))|F}C]|[YS]}YT[WQ]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H 9 9 + 29.128 0.0 0.0 2.3424 2.3424 75.288 0.0 0.0 0.0 13.643937264016872 4.167724800373453 4.167724800373453 6.720449851406517 0 0.2742275032520141 0.0 0.3252574989159953 0.0 {[{M(Oxidation (M))|F}C]|[YS]}YT[WQ]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H;{[{M(Oxidation (M))|F}C]|[YS]}YTE[{I|L}A]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}H;{[{M(Oxidation (M))|F}C]|[YS]}YT[WQ][KG]DP;{[ET]|[MV]}[KG][WQ]TY[MT];{[{M(Oxidation (M))|F}C]|[YS]}YTE[{I|L}A]WDP;{[DA]|[EG]}[KT][WQ]TY[MT];{[ET]|[MV]}W[{I|L}A]ETY[MT];{[TV]|[{I|L}S]}{[QS]|[NT]}[WQ]TY[MT];[{I|L}T][NS][WQ]TY[MT];{[{M(Oxidation (M))|F}C]|[YS]}YTH[WR][MT] 2.3424;1.8019;1.3762;1.3209;1.2953;1.2807;1.2399;1.1959;1.154;1.1341 -;-;-;-;-;-;-;-;-;- 314 + 1 2.339 87513.6 0.5600000023841858 1161 4915 6076 HBL1_DMSO_200M_050219_1,6078 HBL1_DMSO_200M_050219_1,6078,YDHVHPVGAFC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6081 30.969 584.0 161010.0 25 0 15795.0 + 12488 GVASGPAGPC 10 137 408.1893949295807 0 408.1895019412041 PEAK CID FTMS 0 0 0 6080 88282.515625 0.8402240257946565 -3 0.0375919342041015 1 Unmodified _GVASGPAGPC_ REV__ENSG00000006062|ENST00000344686|MAP3K14 4.3292370932331545 0.3961065659209837 3 D 1 -1 9.4897 0.0 0.0 1.1653 0.0 0.0 292.0952072402177 404.2129071369245 696.3081143771421 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 D 1.1653 - 3 + 1 2.339 76846.1 1.0 1162 4917 6080 HBL1_DMSO_200M_050219_1,6081 HBL1_DMSO_200M_050219_1,6081,GVASGPAGPC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6082 30.975 345.0 141940.0 25 0 11914.0 8053 ENQELPDEGT 10 93 566.2444659000915 1130.474378866983 2 566.2440063357353 MULTI CID FTMS 0 0 0 6080 153719.578125 0.8256108337550321 -7 0.0777645111083984 2 Unmodified _ENQELPDEGT_ ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA 8.155526934196011 0.6889124077178598 3 {[WT]|[RM]}QAEDHY 8 8 25.583 0.0 0.0 2.2631 0.0 0.0 0.0 97.04136835269765 97.04136835269765 2.7524439246897003 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[WT]|[RM]}QAEDHY 2.2631 - 255 + 1 2.339 45563.1 1.0 1163 4917 6080 HBL1_DMSO_200M_050219_1,6082 HBL1_DMSO_200M_050219_1,6082,ENQELPDEGT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6086 30.992 400.0 175410.0 25 0 15153.0 + 3415 AYVSSKHSY 9 115 347.83767141210734 0 347.8379089236259 PEAK CID FTMS 0 0 0 6085 57921.14453125 0.6505001078769853 -1 0.0038356781005859 1 Unmodified _AYVSSKHSY_ ENSG00000122376|ENST00000298786|SHLD2;ENST00000323387.5_10:47380981-47400428:+|nuORF;ENST00000475914.1_1_10:46914492-46918356:+|nuORF;nc|ENSG00000122376|Q86V20|SHLD2 24.020572477871973 0.1646235280836931 3 A 1 8 6.9897 0.0 0.0 1.0077 0.0 0.0 487.55513605976313 132.04563318424064 619.6007692440038 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 1.0077 + + 43 + 1 2.339 62073.3 1.0 1164 4920 6085 HBL1_DMSO_200M_050219_1,6086 HBL1_DMSO_200M_050219_1,6086,AYVSSKHSY False True AYVSSKHSY 30.992478 347.837908923626 325329.21875 6085.0 nc|ENSG00000122376|Q86V20|SHLD2;;ENST00000475914.1_1_10:46914492-46918356:+|nuORF;;ENST00000323387.5_10:47380981-47400428:+|nuORF;;ENSG00000122376|ENST00000298786|SHLD2 5.758500576019287 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6087 31.006 800.0 40995.0 25 0 9466.7 -1 0 35 1130.109826467453 3387.30765000256 3 1130.782885730267 MULTI CID FTMS 0 0 0 6085 62270.7265625 1.0 0 0.0 2 3 G 1 -1 6.9897 0.0 0.0 0.20635 0.0 0.0 1959.6783297894724 1367.5949720728397 3327.273301862312 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20635 - 10 + 1 2.339 37343.5 0.3899999856948852 1165 4920 6085 HBL1_DMSO_200M_050219_1,6087 HBL1_DMSO_200M_050219_1,6087, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6089 31.011 28.0 1899400.0 25 0 325620.0 + -1 IQRLETMK 8 62 517.7865055958047 1033.5584582584092 2 517.7868530154228 MULTI CID FTMS 0 0 0 6088 2086129.75 0.0085678759872569 75 -2.5819320678710938 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 29.081581746732265 0.4323690340403521 3 KTT[{I|L}P][WP]K 8 -1 45.468 0.0 0.0 4.3991 0.0 0.0 63.99826040822172 0.0 63.99826040822172 0.0 31.246068678535792 0.0 0.0 0 1.424742501084005 0.0 0.8494850021680094 0.6861818737241735 KTT[{I|L}P][WP]K 4.3991 - 57 + 1 2.339 47804.8 1.0 1166 4921 6088 HBL1_DMSO_200M_050219_1,6089 HBL1_DMSO_200M_050219_1,6089,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6090 31.013 119.0 463030.0 25 0 26196.0 + 15206 IPEYSIKSP 9 83 345.1908757322003 1032.550797796801 3 345.5268737673759 MULTI CID FTMS 0 0 0 6088 396323.8125 0.3115609954259179 -19 0.3067989349365234 2 Unmodified _IPEYSIKSP_ REV__ENSG00000183873|ENST00000423572|SCN5A;REV__nc|ENSG00000183873|Q14524-3|SCN5A;REV__nc|ENSG00000183873|Q14524-4|SCN5A;REV__nc|ENSG00000183873|Q14524-5|SCN5A;REV__nc|ENSG00000183873|Q14524-6|SCN5A;REV__nc|ENSG00000183873|Q14524|SCN5A 7.101721422024254 0.6667666702315642 3 P{I|L}T{M(Oxidation (M))|F}K 5 -1 16.512 0.0 0.0 1.5992 0.0 0.0 428.2257193765526 0.0 428.2257193765526 0.0 5.230657283335098 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 P{I|L}T{M(Oxidation (M))|F}K 1.5992 - 91 + 1 2.339 53928.0 1.0 1167 4921 6088 HBL1_DMSO_200M_050219_1,6090 HBL1_DMSO_200M_050219_1,6090,IPEYSIKSP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6091 31.018 224.0 194940.0 25 0 19605.0 + 35020 SQQASPQTV 9 78 473.235415788961 944.456278644722 2 473.2354003787041 MULTI CID FTMS 0 0 0 6088 139049.4375 0.3760759741451793 -8 0.103891372680664 3 Unmodified _SQQASPQTV_ ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400 31.26834338654808 0.1333407332142048 3 TV 2 7 20.459 0.0 0.0 2.1662 0.0 0.0 726.329994930658 0.0 726.329994930658 0.0 1.9408363697025808 0.0 0.0 0 0.0 0.0 0.25 0.0 + TV 2.1662 + + 152 + 1 2.339 40590.0 1.0 1168 4921 6088 HBL1_DMSO_200M_050219_1,6091 HBL1_DMSO_200M_050219_1,6091,SQQASPQTV False True SQQASPQTV 31.01763 473.235400378704 4469654.0 6088.0 nc|ENSG00000183495|Q96L91-4|EP400;;nc|ENSG00000183495|Q96L91-3|EP400;;nc|ENSG00000183495|Q96L91|EP400;;nc|ENSG00000183495|Q96L91-5|EP400;;ENSG00000183495|ENST00000389561|EP400 6.443082968393962 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6092 31.028 596.0 149690.0 25 0 18629.0 -1 EKKLQNTMK 9 102 568.3107051521316 1134.6068573710631 2 568.3100463747978 MULTI CID FTMS 0 0 0 6088 129776.03125 0.1496181898648677 -20 0.3256359100341797 4 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 22.736283301280096 0.2418982879461534 3 [KT]T[VP]T{I|L}TT{[CA]|SS} 11 -1 + 54.045 0.0 0.0 4.7634 4.7634 86.823 0.0 0.0 0.0 3.890082388541636 33.3444041388363 3.890082388541636 24.445929530416524 0 1.0 0.0 1.7302046884880935 0.3054621874040891 [KT]T[VP]T{I|L}TT{[CA]|SS};[H{I|L}][Y{I|L}]T{I|L}T{M(Oxidation (M))|F}Q;[H{I|L}][Y{I|L}]T{I|L}GV[YG];[KT]T[VP][RD]V[YG];[KT]T[{I|L}P][TA]T[R{M(Oxidation (M))|F}];[KT]T[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[YG] 4.7634;2.6088;1.3318;0.61565;0.35033;0.24021 -;-;-;-;-;- 289 1 2.339 71848.7 1.0 1169 4921 6088 HBL1_DMSO_200M_050219_1,6092 HBL1_DMSO_200M_050219_1,6092,EKKLQNTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6094 31.033 25.0 1393500.0 25 0 125150.0 -1 AYRMFTNNTC 10 69 412.842506577189 1235.505690331767 3 412.8425781130791 MULTI CID FTMS 0 0 0 6093 2111439.0 0.6337168408925596 5 -0.0961284637451171 1 Oxidation (M) _AYRM(Oxidation (M))FTNNTC_ ENSG00000138411|ENST00000644978|HECW2 3.072263186857199 0.7124254767349502 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[H{I|L}]KDYP 8 -1 37.708 0.0 0.0 3.052 0.0 0.0 0.0 218.98877183404105 218.98877183404105 22.22357194224834 0.0 0.0 0.0 0 0.0 2.0 0.0 1.2302046884880935 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[H{I|L}]KDYP 3.052 - 101 1 2.348 32962.0 1.0 1170 4922 6093 HBL1_DMSO_200M_050219_1,6094 HBL1_DMSO_200M_050219_1,6094,AYRMFTNNTC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6095 31.047 800.0 95356.0 25 0 5268.8 + 32549 SAPRENQRSQS 11 116 630.3093460139063 1258.6041390946125 2 630.3098022341728 MULTI CID FTMS 0 0 0 6093 88492.2109375 0.3917141770269569 -7 0.1056976318359375 2 Unmodified _SAPRENQRSQS_ REV__ENST00000367568.4_1_6:144471688-144507808:+|nuORF 33.4449034751529 0.3133739643825231 3 DPSQSTN 7 -1 59.399 0.0 0.0 4.7194 0.0 0.0 511.3000355451188 0.0 511.3000355451188 0.0 35.7533479611304 0.0 0.0 0 1.3182503180159344 0.0 1.5994850021680094 0.0 DPSQSTN 4.7194 - 523 1 2.348 63246.3 0.4699999988079071 1171 4922 6093 HBL1_DMSO_200M_050219_1,6095 HBL1_DMSO_200M_050219_1,6095,SAPRENQRSQS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6098 31.067 800.0 142520.0 25 0 18195.0 + 18158 KTQRSPAL 8 123 450.76658143005216 899.5186099269043 2 450.7669860720634 MULTI CID FTMS 0 0 0 6097 72661.4140625 0.2673903191114026 -6 0.0756053924560546 1 Unmodified _KTQRSPAL_ REV__ENST00000569105.5_1_11:69468929-69488043:-|nuORF 10.073929032068715 0.7620901558688216 3 KT 2 -1 31.239 0.0 0.0 3.4728 0.0 0.0 0.0 667.3528603002678 667.3528603002678 17.948159433551155 0.0 0.0 0.0 0 0.6462566630072955 0.0 0.3807196863200844 0.0 KT 3.4728 + + 115 + 1 2.348 91235.8 0.5799999833106995 1172 4924 6097 HBL1_DMSO_200M_050219_1,6098 HBL1_DMSO_200M_050219_1,6098,KTQRSPAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6099 31.081 800.0 67694.0 25 0 3212.1 + 26171 NQDDNHQEL 9 102 556.733648665694 1111.452744398188 2 556.7341186404228 MULTI CID FTMS 0 0 0 6097 88895.796875 0.7679818135640591 -5 0.0714969635009765 2 Unmodified _NQDDNHQEL_ ENSG00000215305|ENST00000380445|VPS16;ENST00000380393.7_1_20:2844875-2903853:+|nuORF;ENST00000380443.5_1_20:2843179-2847217:+|nuORF;nc|ENSG00000215305|Q9H269-2|VPS16 18.1463463914782 0.3454829746528889 3 GGQDHDEN 8 6 32.77 0.0 0.0 2.9484 0.0 0.0 0.0 256.10805380664414 256.10805380664414 20.551303186493683 0.0 0.0 0.0 0 0.8182503180159344 1.5228787452803376 0.0 0.5 GGQDHDEN 2.9484 - 365 1 2.348 47438.5 0.6000000238418579 1173 4924 6097 HBL1_DMSO_200M_050219_1,6099 HBL1_DMSO_200M_050219_1,6099,NQDDNHQEL False True NQDDNHQEL 31.080638 556.734118640423 873538.0625 6097.0 ENSG00000215305|ENST00000380445|VPS16;;ENST00000380443.5_1_20:2843179-2847217:+|nuORF;;nc|ENSG00000215305|Q9H269-2|VPS16;;ENST00000380393.7_1_20:2844875-2903853:+|nuORF 5.360880374908447 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6101 31.087 188.0 227650.0 25 0 10926.0 + -1 DMMNGQFHQL 10 74 618.7601724727991 1235.5057920123982 2 618.7604858279228 MULTI CID FTMS 0 0 0 6100 338377.375 0.3218090367432726 10 -0.2486534118652343 1 Oxidation (M) _DMM(Oxidation (M))NGQFHQL_ REV__ENSG00000183495|ENST00000389561|EP400;REV__nc|ENSG00000183495|Q96L91-3|EP400;REV__nc|ENSG00000183495|Q96L91-4|EP400;REV__nc|ENSG00000183495|Q96L91-5|EP400;REV__nc|ENSG00000183495|Q96L91|EP400;REV__nc|ENSG00000185684|Q6ZTU2-2|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-4|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-5|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-6|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2|EP400P1 17.11289562659939 0.5604042439455784 3 PYDKNH{I|L}Q 8 -1 54.174 0.0 0.0 4.3848 0.0 0.0 222.0131308364828 0.0 222.0131308364828 0.0 26.96809553823837 0.0 0.0 0 1.6307196863200843 0.0 0.0 1.1549471895720984 PYDKNH{I|L}Q 4.3848 - 229 + 1 2.348 38127.2 1.0 1174 4925 6100 HBL1_DMSO_200M_050219_1,6101 HBL1_DMSO_200M_050219_1,6101,DMMNGQFHQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6102 31.101 800.0 124430.0 25 0 33496.0 -1 0 31 1125.1130769116671 3372.317401335202 3 1125.446948230267 MULTI CID FTMS 0 0 0 6100 177531.765625 0.0771408443520899 -9 0.1283321380615234 2 3 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.28064 0.0 0.0 1797.6286328799267 1367.594121140675 3165.2227540206018 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.28064 - 11 + 1 2.348 89779.0 0.5199999809265137 1175 4925 6100 HBL1_DMSO_200M_050219_1,6102 HBL1_DMSO_200M_050219_1,6102, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6104 31.117 800.0 143500.0 25 0 16047.0 + -1 VQIAWLTMK 9 132 553.3050935167402 1104.5956341002802 2 553.3056518435478 MULTI CID FTMS 0 0 0 6103 125131.9921875 0.287607106831307 12 -0.3225421905517578 1 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 16.149105407346934 0.3995459350917656 3 T[{I|L}P]T{M(Oxidation (M))|F}K 6 -1 43.901 0.0 0.0 3.9744 0.0 0.0 399.2208119123063 0.0 399.2208119123063 0.0 28.667301441841406 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 T[{I|L}P]T{M(Oxidation (M))|F}K 3.9744 - 415 1 2.348 89783.5 0.5799999833106995 1176 4926 6103 HBL1_DMSO_200M_050219_1,6104 HBL1_DMSO_200M_050219_1,6104,VQIAWLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6105 31.124 405.0 241600.0 25 0 121570.0 -1 0 73 484.2028781375771 483.1956016709771 1 484.2028076052666 MULTI CID FTMS 0 0 0 6103 181415.296875 0.760988958410783 13 -0.3720531463623047 2 3 M 1 -1 12.764 0.0 0.0 2.6416 0.0 0.0 334.1446811160927 0.0 334.1446811160927 0.0 3.0864997894234936 0.0 0.0 0 0.0 0.0 0.0 0.0 M 2.6416 - 14 + 1 2.348 81955.4 1.0 1177 4926 6103 HBL1_DMSO_200M_050219_1,6105 HBL1_DMSO_200M_050219_1,6105, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6108 31.144 800.0 165870.0 25 0 19521.0 + 31938 RVDKNAPTV 9 134 500.2831328199825 998.551712706765 2 500.2826415896416 MULTI CID FTMS 0 0 0 6107 114244.8046875 0.1854492682384917 -6 0.1001262664794921 1 Unmodified _RVDKNAPTV_ ENSG00000102879|ENST00000219150|CORO1A;ENST00000568982.5_1_16:30195026-30198313:+|nuORF;ENST00000569469.1_1_16:30195026-30198371:+|nuORF 49.52724829834842 0.0414064571532091 3 KNAPTV 6 3 50.716 0.0 0.0 5.0789 0.0 0.0 370.1965884349687 0.0 370.1965884349687 0.0 39.74652792162934 0.0 0.0 0 1.9436726795685344 0.0 0.3807196863200844 0.3807196863200844 + KNAPTV 5.0789 + + 624 1 2.361 103411.5 0.6800000071525574 1178 4928 6107 HBL1_DMSO_200M_050219_1,6108 HBL1_DMSO_200M_050219_1,6108,RVDKNAPTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6109 31.158 800.0 204120.0 25 0 28130.0 + 18320 KVLDQKEHRL 10 161 422.5822599467986 1264.724950440596 3 422.5820495486259 MULTI CID FTMS 0 0 0 6107 115800.609375 1.0 0 0.0 2 Unmodified _KVLDQKEHRL_ ENSG00000197451|ENST00000358344|HNRNPAB;nc|ENSG00000197451|Q99729-3|HNRNPAB;nc|ENSG00000197451|Q99729-4|HNRNPAB;nc|ENSG00000197451|Q99729|HNRNPAB 46.0223103267499 0.103496714999793 3 KV{I|L}DQKEH{I|L}R 10 2 + 71.614 0.0 0.0 5.6624 5.6624 57.899 0.0 0.0 0.0 3.6991128507179374 1.9957235490520449 1.9957235490520449 0.0 0 0.9436726795685344 0.0 0.3807196863200844 0.8807196863200843 KV{I|L}DQKEH{I|L}R;KV{I|L}DQKE{I|L}HR;KV{I|L}DQKE{I|L}RH;K{I|L}VDQKE{I|L}HR;K{I|L}VDQKEH{I|L}R;K{I|L}VDQKE{I|L}RH;KV{I|L}D[AG]KEH{I|L}R;KV{I|L}D[AG]KE{I|L}HR;KV{I|L}D[AG]KE{I|L}RH;K{I|L}VD[AG]KE{I|L}HR 5.6624;5.6624;5.5046;5.1626;5.1626;5.0048;4.9378;4.9378;4.78;4.438 -;-;-;-;-;-;-;-;-;- 870 + 1 2.361 140061.1 0.6200000047683716 1179 4928 6107 HBL1_DMSO_200M_050219_1,6109 HBL1_DMSO_200M_050219_1,6109,KVLDQKEHRL True True KVLDQKEHRL 31.158184 422.582049548626 545340.1875 6107.0 ENSG00000197451|ENST00000358344|HNRNPAB;;nc|ENSG00000197451|Q99729-4|HNRNPAB;;nc|ENSG00000197451|Q99729-3|HNRNPAB;;nc|ENSG00000197451|Q99729|HNRNPAB 5.607170581817627 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6112 31.178 800.0 121590.0 25 0 10342.0 + 12983 HAIPSMSHV 9 134 497.74207828441735 993.4696036356348 2 497.7416564822197 MULTI CID FTMS 0 0 0 6111 89428.265625 0.72528051130713 -2 0.033853530883789 1 Oxidation (M) _HAIPSM(Oxidation (M))SHV_ ENSG00000137074|ENST00000379817|APTX;ENST00000479656.5_1_9:32974523-32984658:-|nuORF;nc|ENSG00000137074|Q7Z2E3-10|APTX;nc|ENSG00000137074|Q7Z2E3-11|APTX;nc|ENSG00000137074|Q7Z2E3-2|APTX;nc|ENSG00000137074|Q7Z2E3-3|APTX;nc|ENSG00000137074|Q7Z2E3-4|APTX;nc|ENSG00000137074|Q7Z2E3-5|APTX;nc|ENSG00000137074|Q7Z2E3-6|APTX;nc|ENSG00000137074|Q7Z2E3-8|APTX;nc|ENSG00000137074|Q7Z2E3-9|APTX;nc|ENSG00000137074|Q7Z2E3|APTX 54.773552608820026 0.0299037012502309 3 HA{I|L}P 4 5 50.394 0.0 0.0 5.0725 0.0 0.0 0.0 572.2121065729124 572.2121065729124 24.40614065464281 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + HA{I|L}P 5.0725 + + 547 + 1 2.361 80188.6 0.6200000047683716 1180 4930 6111 HBL1_DMSO_200M_050219_1,6112 HBL1_DMSO_200M_050219_1,6112,HAIPSMSHV True False HAIPSMSHV 31.178217 497.74165648222 906545.625 6111.0 nc|ENSG00000137074|Q7Z2E3|APTX;;nc|ENSG00000137074|Q7Z2E3-9|APTX;;nc|ENSG00000137074|Q7Z2E3-11|APTX;;nc|ENSG00000137074|Q7Z2E3-4|APTX;;nc|ENSG00000137074|Q7Z2E3-3|APTX;;ENST00000479656.5_1_9:32974523-32984658:-|nuORF;;nc|ENSG00000137074|Q7Z2E3-2|APTX;;nc|ENSG00000137074|Q7Z2E3-8|APTX;;ENSG00000137074|ENST00000379817|APTX;;nc|ENSG00000137074|Q7Z2E3-5|APTX;;nc|ENSG00000137074|Q7Z2E3-10|APTX;;nc|ENSG00000137074|Q7Z2E3-6|APTX 8.671515782674154 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6113 31.192 800.0 184900.0 25 0 18026.0 + -1 TNLTTLPMR 9 146 531.7849025026887 1061.5552520721774 2 531.7834350466728 MULTI CID FTMS 0 0 0 6111 93893.1328125 0.2126173698621141 -9 0.1556930541992187 2 Oxidation (M) _TNLTTLPM(Oxidation (M))R_ REV__ENST00000462623.1_1_3:62109880-62110168:-|nuORF 22.736283301280096 0.2418982879461534 3 {[ET]|[MV]}T{[TV]|[{I|L}S]}S{I|L}D 8 -1 28.477 0.0 0.0 2.6825 0.0 0.0 0.0 212.1332608174986 212.1332608174986 3.0637953183928843 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.8633643341304673 0.0 {[ET]|[MV]}T{[TV]|[{I|L}S]}S{I|L}D 2.6825 - 2210 1 2.361 118102.6 0.6499999761581421 1181 4930 6111 HBL1_DMSO_200M_050219_1,6113 HBL1_DMSO_200M_050219_1,6113,TNLTTLPMR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6114 31.206 800.0 44731.0 25 0 8323.1 -1 0 37 1132.7698900041405 3395.287840612622 3 1133.770312488079 MULTI CID FTMS 0 0 0 6111 86352.515625 0.8014378301598472 -4 0.0613765716552734 3 3 T 1 -1 3.9794 0.0 0.0 0.1172 0.0 0.0 3030.155529449244 261.0618990533813 3291.2174285026254 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.1172 - 4 + 1 2.361 37510.1 0.4699999988079071 1182 4930 6111 HBL1_DMSO_200M_050219_1,6114 HBL1_DMSO_200M_050219_1,6114, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6115 31.22 800.0 180150.0 25 0 9529.6 19894 LHREEMVYEL 10 141 440.21893836090817 1317.6349856829245 3 440.2190124392509 MULTI CID FTMS 0 0 0 6111 81194.6640625 0.3611926047404362 -4 0.0613765716552734 4 Unmodified _LHREEMVYEL_ CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 10.898955630103616 0.6646681216928481 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQMNT{M(Oxidation (M))|F}QR 10 9 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H + + 83.005 3.701 0.93885 6.2996 6.2996 60.001 0.0 0.0 0.0 0.0 67.96818086019543 0.0 0.0 0 1.805462187404089 0.0 1.174742501084005 2.2893476900973595 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQMNT{M(Oxidation (M))|F}QR 6.2996 - 1542 + 1 2.361 117415.6 0.5799999833106995 1183 4930 6111 HBL1_DMSO_200M_050219_1,6115 HBL1_DMSO_200M_050219_1,6115,LHREEMVYEL False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 6118 31.24 800.0 336630.0 25 0 24436.0 -1 0 82 503.22920785747874 2511.109656954394 5 503.4303466677666 MULTI CID FTMS 0 0 0 6117 144757.28125 0.8923249849023202 -2 0.0615749359130859 1 3 D 1 -1 10.485 0.0 0.0 0.41753 0.0 0.0 1667.7449032517238 725.3158779410631 2393.060781192787 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 D 0.41753 - 84 + 1 2.368 210223.1 0.7799999713897705 1184 4932 6117 HBL1_DMSO_200M_050219_1,6118 HBL1_DMSO_200M_050219_1,6118, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6119 31.254 800.0 238350.0 25 0 17119.0 + 10404 FSYIDLLSSAN 11 155 615.30439507158 1228.5942372099598 2 615.3054687380791 MULTI CID FTMS 0 0 0 6117 186458.671875 0.2006709268914988 -4 0.095428466796875 2 Unmodified _FSYIDLLSSAN_ REV__ENSG00000166197|ENST00000605788|NOLC1;REV__nc|ENSG00000166197|Q14978-2|NOLC1;REV__nc|ENSG00000166197|Q14978-3|NOLC1 49.55428908609986 0.1200983873401432 3 DDPSQSAN 8 -1 86.197 0.0 0.0 7.0159 0.0 0.0 396.2731800763688 0.0 396.2731800763688 0.0 43.84086330586794 0.0 0.0 0 1.75 0.0 2.1989700043360187 0.2742275032520141 DDPSQSAN 7.0159 - 9902 1 2.368 141470.8 0.8299999833106995 1185 4932 6117 HBL1_DMSO_200M_050219_1,6119 HBL1_DMSO_200M_050219_1,6119,FSYIDLLSSAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6121 31.27 800.0 26641.0 25 0 7394.2 -1 0 24 1142.750608930094 3425.229997390482 3 1143.752124011517 MULTI CID FTMS 0 0 0 6120 46824.3515625 0.3809258477045811 1 -0.0243034362792968 1 3 E 1 -1 6.9897 0.0 0.0 0.20407 0.0 0.0 2716.088164970364 577.0727022760374 3293.160867246401 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20407 - 2 + 1 2.368 27584.6 0.4099999964237213 1186 4933 6120 HBL1_DMSO_200M_050219_1,6121 HBL1_DMSO_200M_050219_1,6121, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6122 31.271 38.0 1929000.0 25 0 275850.0 + 44229 YLHQGLRF 8 77 345.1908757322003 1032.550797796801 3 345.1892578005791 MULTI CID FTMS 0 0 0 6120 1088193.875 0.6390943127509782 -4 0.0954780578613281 2 Unmodified _YLHQGLRF_ REV__ENSG00000165731|ENST00000355710|RET;REV__nc|ENSG00000165731|P07949-2|RET 6.2057823575117 0.7866635192979977 3 Y{I|L} 2 -1 20.969 0.0 0.0 2.0308 0.0 0.0 0.0 753.3762944899019 753.3762944899019 10.013487579716768 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 2.0308 + + 62 + 1 2.368 67871.1 1.0 1187 4933 6120 HBL1_DMSO_200M_050219_1,6122 HBL1_DMSO_200M_050219_1,6122,YLHQGLRF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6123 31.278 385.0 253280.0 25 0 28549.0 33608 SIPSSDFLCV 10 118 534.2590934377832 1066.5036339423664 2 534.2586547732353 MULTI CID FTMS 0 0 0 6120 218661.28125 0.0243570777526032 -7 0.1530075073242187 3 Unmodified _SIPSSDFLCV_ ENSG00000106804|ENST00000223642|C5 24.020572477871973 0.4289996903560794 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VPSSHV{[QG]|[NA]} 10 8 + 55.341 0.0 0.0 5.189 5.189 82.013 0.0 0.0 0.0 1.543935153772651 7.4809756783349 1.543935153772651 6.450776664268147 0 0.9247425010840048 0.0 2.135151878060192 0.3807196863200844 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VPSSHV{[QG]|[NA]};[TP]SAPSSHV{[QG]|[NA]};{[MG]|[TS]}PAPSSHV{[QG]|[NA]};{[CP]|[EA]}GVPSSHV{[QG]|[NA]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]VSHV{[QG]|[NA]};[TP][PA]SSSHV{[QG]|[NA]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[DG]VHV{[QG]|[NA]};[TP]SSS[PA]HV{[QG]|[NA]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]SVHV{[QG]|[NA]};{[MG]|[TS]}PSS[PA]HV{[QG]|[NA]} 5.189;4.5841;4.4296;4.3195;3.3107;3.2996;3.2467;2.8846;2.8485;2.73 -;-;-;-;-;-;-;-;-;- 1736 1 2.368 84267.8 1.0 1188 4933 6120 HBL1_DMSO_200M_050219_1,6123 HBL1_DMSO_200M_050219_1,6123,SIPSSDFLCV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6125 31.283 28.0 2070900.0 25 0 300080.0 + -1 IQRLETMK 8 72 517.7865055958047 1033.5584582584092 2 517.7866699099541 MULTI CID FTMS 0 0 0 6124 1987154.625 0.0081613784542903 88 -3.1264781951904297 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 3 QT{M(Oxidation (M))|F}K 4 -1 34.641 0.0 0.0 3.3516 0.0 0.0 511.31219468594674 0.0 511.31219468594674 0.0 20.617515817243515 0.0 0.0 0 1.0 0.0 0.0 0.3494850021680094 QT{M(Oxidation (M))|F}K 3.3516 - 59 + 1 2.368 52677.3 1.0 1189 4934 6124 HBL1_DMSO_200M_050219_1,6125 HBL1_DMSO_200M_050219_1,6125,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6126 31.29 418.0 209390.0 25 0 28082.0 + 35021 SQQASPQTV 9 120 473.235415788961 944.456278644722 2 473.2355224490166 MULTI CID FTMS 0 0 0 6124 172864.109375 0.4675318325393581 5 -0.194742202758789 2 Unmodified _SQQASPQTV_ ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400 53.832793166522166 0.0319663582346103 3 [QP]TV 4 5 24.207 0.0 0.0 2.5631 0.0 0.0 0.0 516.2051549477095 516.2051549477095 -11.384561543147314 0.0 -11.384561543147314 0.0 0 0.0 0.721246399047171 0.3807196863200844 0.3494850021680094 + [QP]TV 2.5631 + + 714 1 2.368 71774.4 1.0 1190 4934 6124 HBL1_DMSO_200M_050219_1,6126 HBL1_DMSO_200M_050219_1,6126,SQQASPQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6127 31.299 480.0 186010.0 25 0 23329.0 -1 EKKLQNTMK 9 83 568.3107051521316 1134.6068573710631 2 568.3112060427666 MULTI CID FTMS 0 0 0 6124 201739.34375 0.2325843620402847 -7 0.1537857055664062 3 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 22.736283301280096 0.2418982879461534 3 KTT{I|L}PT[WP]K 9 -1 66.111 0.0 0.0 5.8268 0.0 0.0 63.99854474484898 0.0 63.99854474484898 0.0 50.89448436569874 0.0 0.0 0 1.3494850021680094 0.0 1.7302046884880935 0.3252574989159953 KTT{I|L}PT[WP]K 5.8268 - 303 + 1 2.368 72454.0 1.0 1191 4934 6124 HBL1_DMSO_200M_050219_1,6127 HBL1_DMSO_200M_050219_1,6127,EKKLQNTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6128 31.306 394.0 131410.0 25 0 5006.7 + 4990 DGTGTRTI 8 95 410.7113012665943 819.4080495999887 2 410.7112914919853 MULTI CID FTMS 0 0 0 6124 130908.5546875 1.0 0 0.0 4 Unmodified _DGTGTRTI_ ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1 21.53697664764585 0.591232569029014 3 [DG]TH 4 5 29.346 0.0 0.0 3.5813 0.0 0.0 0.0 406.2250716549293 406.2250716549293 18.236293497224647 0.0 0.0 0.0 0 0.9247425010840048 1.154901959985743 0.2887254899964357 0.0 [DG]TH 3.5813 - 78 1 2.368 42110.0 1.0 1192 4934 6124 HBL1_DMSO_200M_050219_1,6128 HBL1_DMSO_200M_050219_1,6128,DGTGTRTI False True DGTGTRTI 31.305587 410.711291491985 703999.0 6124.0 nc|ENSG00000163349|Q86Z02-3|HIPK1;;nc|ENSG00000163349|Q86Z02-4|HIPK1;;ENSG00000163349|ENST00000426820|HIPK1;;nc|ENSG00000163349|Q86Z02-2|HIPK1 3.297600507736206 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6129 31.316 569.0 221090.0 25 0 59520.0 + 16599 KDVDGAYMT 9 114 508.2230388096877 1014.4315246861752 2 508.2220031619072 MULTI CID FTMS 0 0 0 6124 122452.625 0.6195368261481814 -2 0.0543594360351562 5 Oxidation (M) _KDVDGAYM(Oxidation (M))T_ CON__P04264;ENSG00000167768|ENST00000252244|KRT1 55.50274090549119 0.0285720310785888 3 GDVDQYT{M(Oxidation (M))|F} 8 5 54.339 0.0 0.0 5.3566 0.0 0.0 71.07427413154453 0.0 71.07427413154453 0.0 10.80706579873059 0.0 0.0 0 0.4247425010840047 0.0 1.8283409326844264 0.0 GDVDQYT{M(Oxidation (M))|F} 5.3566 - 1870 1 2.368 101742.9 1.0 1193 4934 6124 HBL1_DMSO_200M_050219_1,6129 HBL1_DMSO_200M_050219_1,6129,KDVDGAYMT True False KDVDGAYMT 31.315554 508.222003161907 802090.5 6124.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 7.063000679016113 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 6130 31.329 800.0 188260.0 25 0 9706.6 + 28829 QADQVFRHCY 10 141 633.7892218670086 1265.563890800817 2 633.7883178591728 MULTI CID FTMS 0 0 0 6124 115135.90625 0.3691627782498752 -3 0.0582656860351562 6 Unmodified _QADQVFRHCY_ REV__ENSG00000198825|ENST00000650623|INPP5F;REV__nc|ENSG00000198825|Q9Y2H2-4|INPP5F 41.8396318013385 0.1381409678234242 3 [AG]DAH{[{M(Oxidation (M))|F}H]|[RQ]}AQQGQ 12 -1 + 82.379 0.0 0.0 6.5093 6.5093 85.339 0.0 0.0 0.0 6.480063036343125 1.501031689673482 1.501031689673482 5.255762612236907 0 1.2619229975844686 2.0 1.8728473723926464 1.5044321917401078 [AG]DAH{[{M(Oxidation (M))|F}H]|[RQ]}AQQGQ;[AG]GEH{[{M(Oxidation (M))|F}H]|[RQ]}AQQGQ;[AG]ADH{[{M(Oxidation (M))|F}H]|[RQ]}AQQGQ;{[QN]|[E{I|L}]|[KN]}AQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQGQ;[AG]DAH{[{M(Oxidation (M))|F}H]|[RQ]}AQ[AG]GQ;[AG]DAH{[{M(Oxidation (M))|F}H]|[RQ]}A[AG]QGQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AH{[{M(Oxidation (M))|F}H]|[RQ]}AQQGQ;[AG]DHA{[{M(Oxidation (M))|F}H]|[RQ]}AQQGQ;{[DA]|[EG]}QH{[{M(Oxidation (M))|F}H]|[RQ]}AQQGQ;[AG]GEH{[{M(Oxidation (M))|F}H]|[RQ]}AQ[AG]GQ 6.5093;6.094;6.0578;5.9972;5.7904;5.7904;5.5887;5.4812;5.3984;5.3751 -;-;-;-;-;-;-;-;-;- 13533 1 2.368 115814.5 0.5400000214576721 1194 4934 6124 HBL1_DMSO_200M_050219_1,6130 HBL1_DMSO_200M_050219_1,6130,QADQVFRHCY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6132 31.345 800.0 142370.0 25 0 15046.0 12746 GVNVREKV 8 119 450.76658143005216 899.5186099269043 2 450.7668029665947 MULTI CID FTMS 0 0 0 6131 40937.453125 0.1506477515739833 5 -0.2235317230224609 1 Unmodified _GVNVREKV_ ENSG00000049283|ENST00000268933|EPN3;ENST00000512291.5_1_17:48613811-48618261:+|nuORF;ENST00000512379.5_1_17:48610205-48619515:+|nuORF;nc|ENSG00000049283|Q9H201-2|EPN3 2.577480529830294 0.808687252328423 3 KT 2 7 24.464 0.0 0.0 2.7197 0.0 0.0 0.0 667.3554781549436 667.3554781549436 13.20489028679166 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 KT 2.7197 - 42 + 1 2.368 96370.8 0.550000011920929 1195 4935 6131 HBL1_DMSO_200M_050219_1,6132 HBL1_DMSO_200M_050219_1,6132,GVNVREKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6133 31.359 800.0 115120.0 25 0 15391.0 -1 PEGWKVGCNSC 11 121 412.842506577189 1235.505690331767 3 412.8425475955009 MULTI CID FTMS 0 0 0 6131 89276.953125 0.0267951424118282 18 -0.8375835418701172 2 Carbamidomethyl (C) _PEGWKVGC(Carbamidomethyl (C))NSC_ ENST00000456179.1_1_X:154261825-154282944:+|nuORF 2.6312355333042263 0.8627335947654684 3 PYDK 4 -1 20.165 0.0 0.0 1.6321 0.0 0.0 222.01023799507965 507.2347811334594 729.2450191285391 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 PYDK 1.6321 - 117 + 1 2.368 75573.6 0.4399999976158142 1196 4935 6131 HBL1_DMSO_200M_050219_1,6133 HBL1_DMSO_200M_050219_1,6133,PEGWKVGCNSC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6135 31.365 148.0 732660.0 25 0 193650.0 -1 0 40 1125.1130769116671 3372.317401335202 3 1125.447436511517 MULTI CID FTMS 0 0 0 6134 1349389.625 0.5863348154398778 2 -0.0639781951904296 1 3 C(Carbamidomethyl (C)){M(Oxidation (M))|F}Y 3 -1 10.177 0.0 0.0 0.30179 0.0 0.0 1312.466419257914 1586.6719901260612 2899.138409383975 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){M(Oxidation (M))|F}Y 0.30179 - 51 + 1 2.368 100572.3 1.0 1197 4936 6134 HBL1_DMSO_200M_050219_1,6135 HBL1_DMSO_200M_050219_1,6135, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6136 31.37 283.0 413540.0 25 0 61373.0 -1 IIPLVMEMK 9 115 553.3051605374619 1104.5957681417235 2 553.3052856326103 MULTI CID FTMS 0 0 0 6134 383443.84375 0.7703862038482258 -3 0.1055564880371093 2 2 Oxidation (M) _IIPLVM(Oxidation (M))EM(Oxidation (M))K_ ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-2|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A 21.74664581756881 0.2544899275067181 3 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 54.243 0.0 0.0 4.9107 4.9107 86.013 0.0 0.0 0.0 0.7378621416091846 40.34195591137106 0.7378621416091846 13.634993639681312 0 1.924742501084005 0.0 1.1861818737241734 0.0 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K;[C(Carbamidomethyl (C))K][{I|L}V][{I|L}P]T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[{I|L}P][RD]{M(Oxidation (M))|F}K;[KT][RD][{I|L}P]GV[YG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]TT{[CA]|SS};[KT][RD][{I|L}P]R[YG];[HT]VG[{I|L}P]T[QP]R;[KT][RD][RH][RH];[C(Carbamidomethyl (C))K][{I|L}V][{I|L}P]GV[YG] 4.9107;3.6763;3.4037;2.7554;2.264;2.2099;2.1046;1.2457;1.2248;1.0296 -;-;-;-;-;-;-;-;-;- 550 1 2.368 95102.9 1.0 1198 4936 6134 HBL1_DMSO_200M_050219_1,6136 HBL1_DMSO_200M_050219_1,6136,IIPLVMEMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6137 31.373 139.0 476520.0 25 0 50155.0 + 24719 MPDDHARKI 9 81 361.51862980715794 1081.534060021674 3 361.5183898806572 MULTI CID FTMS 0 0 0 6134 286121.84375 0.0380690403049974 -3 0.1055564880371093 3 Unmodified _MPDDHARKI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 20.41453444215458 0.284085796332423 3 MPDDHAR[K{I|L}] 9 0 + 48.07 0.0 0.0 4.4446 4.4446 86.177 0.0 0.0 0.0 20.942577266510582 4.181212380090216 4.181212380090216 32.23320034371433 0 0.0 0.0 0.4247425010840047 0.0 + + MPDDHAR[K{I|L}];{[{M(Oxidation (M))|F}H]|[RQ]}[RN]ADP[EP];{[{M(Oxidation (M))|F}H]|[RQ]}{[NV]|[RG]}GADP[EP];{[{M(Oxidation (M))|F}H]|[RQ]}GRGAQ[Y{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}H]|[RQ]}[RN]AQ[Y{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}H]|[RQ]}[RN]WP[EP];{[{M(Oxidation (M))|F}H]|[RQ]}{[NV]|[RG]}QDP[EP];{[{M(Oxidation (M))|F}H]|[RQ]}{[NV]|[RG]}GWP[EP];{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{[HG]|PP}Q[Y{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}QY[{I|L}P]M 4.4446;1.4643;1.422;1.1896;0.98331;0.8205;0.818;0.7732;0.70498;0.68019 +;-;-;-;-;-;-;-;-;- + 351 + 1 2.368 63387.9 1.0 1199 4936 6134 HBL1_DMSO_200M_050219_1,6137 HBL1_DMSO_200M_050219_1,6137,MPDDHARKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6138 31.386 800.0 278100.0 25 0 19207.0 + 31480 RPWYWEWCTWQ 11 144 820.8556758367304 1639.6967987402606 2 820.8557006716728 MULTI CID FTMS 0 0 0 6134 177452.5625 0.23626978404245 -3 0.1055564880371093 4 Unmodified _RPWYWEWCTWQ_ REV__ENST00000409198.5_2_2:152506865-152507290:-|nuORF 5.296884461304476 0.8501568894076437 3 [EP]APNSSAPEAEQGQE 16 -1 + 130.71 0.0 0.0 7.9716 7.9716 82.071 0.0 0.0 0.0 11.70696227168976 11.59424610898563 11.59424610898563 0.5681094537576712 0 3.411819340634495 1.0457574905606752 2.754432191740108 0.9361818737241736 [EP]APNSSAPEAEQGQE;[EP]AEQGAAPEAEQGQE;[EP]AQEGAAPEAEQGQE;[EP]AEQQAPEAEQGQE;[EP]AQEQAPEAEQGQE;[EP]APNSSAPEAE[AG]GQE;[EP]AEQGAAPEAE[AG]GQE;{[CP]|[EA]}PPNSSAPEAEQGQE;[EP]AQEGAAPEAE[AG]GQE;{[CP]|[EA]}PEQGAAPEAEQGQE 7.9716;7.937;7.8017;7.6204;7.4851;7.4219;7.3872;7.2577;7.2519;7.223 -;-;-;-;-;-;-;-;-;- 319875 1 2.368 152057.4 0.6600000262260437 1200 4936 6134 HBL1_DMSO_200M_050219_1,6138 HBL1_DMSO_200M_050219_1,6138,RPWYWEWCTWQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6140 31.404 800.0 174920.0 25 0 22174.0 + 31939 RVDKNAPTV 9 150 500.2831328199825 998.551712706765 2 500.2839233279228 MULTI CID FTMS 0 0 0 6139 174862.71875 0.2838480342548897 3 -0.1665821075439453 1 Unmodified _RVDKNAPTV_ ENSG00000102879|ENST00000219150|CORO1A;ENST00000568982.5_1_16:30195026-30198313:+|nuORF;ENST00000569469.1_1_16:30195026-30198371:+|nuORF 45.739877483867886 0.0497104363764649 3 V{M(Oxidation (M))|F}PR[PS]VTP 9 7 + 73.296 0.0 0.0 7.3403 7.3403 86.305 0.0 0.0 0.0 20.60921607028648 4.131041251400106 4.131041251400106 4.131041251400106 0 0.6747425010840047 1.5228787452803376 1.5994850021680094 0.3807196863200844 V{M(Oxidation (M))|F}PR[PS]VTP;V{M(Oxidation (M))|F}PR[PS]PTV;V{M(Oxidation (M))|F}PR[PS]{I|L}SP;V{M(Oxidation (M))|F}PR[PS]PS{I|L};V{[WT]|[RM]}{I|L}[PS]PTV;V[RD]{[QN]|[E{I|L}]|[KN]}APTV;V{[WT]|[RM]}{I|L}[PS]PS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KQ]{I|L}APTV;V{M(Oxidation (M))|F}PREVVGP;{[DS]|[MA]|[CV]|TT}{I|L}[PS]{I|L}APTV 7.3403;6.9265;6.5566;6.1822;5.3502;4.79;4.6059;4.523;4.4027;4.3437 -;-;-;-;-;-;-;-;-;- 1580 + 1 2.366 110409.4 0.8500000238418579 1201 4937 6139 HBL1_DMSO_200M_050219_1,6140 HBL1_DMSO_200M_050219_1,6140,RVDKNAPTV True True RVDKNAPTV 31.403774 500.283923327923 2826734.75 6139.0 ENST00000568982.5_1_16:30195026-30198313:+|nuORF;;chr16:30183725-30186598|15|20.67|0.24|6.45|+|0|CORO1A,CORO1A|1;;ENST00000569469.1_1_16:30195026-30198371:+|nuORF;;ENSG00000102879|ENST00000219150|CORO1A 6.379170099894206 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6141 31.41 318.0 292050.0 25 0 37882.0 -1 VPMQDQEQV 9 85 545.2495177076589 1088.4844824821178 2 545.2488281130791 MULTI CID FTMS 0 0 0 6139 187068.9375 0.7200241619572821 -2 0.0569496154785156 2 Oxidation (M) _VPM(Oxidation (M))QDQEQV_ ENSG00000145715|ENST00000274376|RASA1;nc|ENSG00000145715|P20936-2|RASA1;nc|ENSG00000145715|P20936-3|RASA1;nc|ENSG00000145715|P20936-4|RASA1 9.38312468134398 0.5871240394367778 3 VP 2 -1 31.498 0.0 0.0 2.8937 0.0 0.0 0.0 889.341258110213 889.341258110213 10.299632233774432 0.0 0.0 0.0 0 0.3494850021680094 0.8538719643217619 0.0 0.0 VP 2.8937 + + 27 + 1 2.366 74774.2 1.0 1202 4937 6139 HBL1_DMSO_200M_050219_1,6141 HBL1_DMSO_200M_050219_1,6141,VPMQDQEQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6142 31.423 800.0 76318.0 25 0 5911.1 4702 DDNNEEEEF 9 115 570.7005204686922 1139.3864880041842 2 570.7002441287041 MULTI CID FTMS 0 0 0 6139 125273.9765625 1.0 0 0.0 3 Unmodified _DDNNEEEEF_ ENSG00000054267|ENST00000264183|ARID4B;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B 2.059750862983233 0.8427793054688888 3 Y 1 9 13.495 0.0 0.0 1.1844 0.0 0.0 958.3118400323076 0.0 958.3118400323076 0.0 3.809483186181799 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1844 - 62 + 1 2.366 52857.4 0.5899999737739563 1203 4937 6139 HBL1_DMSO_200M_050219_1,6142 HBL1_DMSO_200M_050219_1,6142,DDNNEEEEF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6144 31.439 800.0 108300.0 25 0 5248.3 + -1 DQNQMGNVM 9 171 526.7088455858478 0 526.7095214724541 PEAK CID FTMS 0 0 0 6143 66979.8359375 0.4563469310585198 -1 0.0369396209716796 1 Oxidation (M) _DQNQM(Oxidation (M))GNVM_ REV__ENSG00000106571|ENST00000395925|GLI3 20.453626601364224 0.1969592619112565 3 G{M(Oxidation (M))|F}SHSQ 6 -1 24.083 0.0 0.0 2.2906 0.0 0.0 243.0862396788619 162.02346216373283 405.1097018425948 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.7134679910804405 G{M(Oxidation (M))|F}SHSQ 2.2906 - 120 + 1 2.366 68747.2 0.5 1204 4938 6143 HBL1_DMSO_200M_050219_1,6144 HBL1_DMSO_200M_050219_1,6144,DQNQMGNVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6145 31.445 326.0 463040.0 25 0 53908.0 + 24721 MPDDHARKI 9 113 541.7741720134719 1081.5337910937435 2 541.7739745974541 MULTI CID FTMS 0 0 0 6143 326413.84375 0.4416037915570363 -1 0.0369396209716796 2 Unmodified _MPDDHARKI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 85.64151623876279 0.0161498729896241 3 MPDDHAR[K{I|L}] 9 0 + 97.872 0.0 0.0 9.0494 9.0494 98.854 0.0 0.0 0.0 66.54824662788698 4.762036441594191 4.762036441594191 60.53794897944992 0 1.6237125054200234 1.6989700043360187 0.7742275032520141 0.7059771852360797 + + MPDDHAR[K{I|L}];[DP]DHARK{I|L}M;[DP][HA]DRK{I|L}M;M{I|L}{[ET]|[MV]}K[WK]{M(Oxidation (M))|F};{I|L}D[{M(Oxidation (M))|F}V]K[WK]{M(Oxidation (M))|F};{I|L}M{[ET]|[MV]}K[WK]{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[HT][QP]K{I|L}M;{NN|[MP]|[D{I|L}]|[EV]}[KT][HQ]P{I|L}M;{I|L}[{M(Oxidation (M))|F}V]DK[WK]{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[KT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{I|L}M 9.0494;3.4519;2.4377;1.7892;1.3452;0.95537;0.76844;0.60562;0.44303;0.44281 +;-;-;-;-;-;-;-;-;- + 296 + 1 2.366 118951.3 1.0 1205 4938 6143 HBL1_DMSO_200M_050219_1,6145 HBL1_DMSO_200M_050219_1,6145,MPDDHARKI True True MPDDHARKI 31.445332 541.773974597454 75093713.5 6143.0 nc|ENSG00000052841|Q96AE7-2|TTC17;;ENSG00000052841|ENST00000039989|TTC17 6.044778108596802 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6146 31.459 800.0 136100.0 25 0 18162.0 + -1 VDSMCGMHSP 10 132 560.7149626487421 1119.4153723642842 2 560.7145263552666 MULTI CID FTMS 0 0 0 6143 110576.390625 0.7238714072446579 -1 0.0369396209716796 3 Carbamidomethyl (C) _VDSMC(Carbamidomethyl (C))GMHSP_ REV__ENSG00000151615|ENST00000281321|POU4F2;REV__nc|ENSG00000151615|Q12837-2|POU4F2 10.823927491677226 0.6659270209832991 3 {I|L}ADP 4 -1 12.55 0.0 0.0 1.1211 0.0 0.0 705.2034715847905 0.0 705.2034715847905 0.0 0.8689446148148452 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}ADP 1.1211 - 145 + 1 2.366 86061.1 0.5699999928474426 1206 4938 6143 HBL1_DMSO_200M_050219_1,6146 HBL1_DMSO_200M_050219_1,6146,VDSMCGMHSP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6147 31.473 800.0 50387.0 25 0 2226.7 -1 LRCCMHRWPVC 11 77 767.3364804471429 1532.6584079610857 2 767.3329345583916 MULTI CID FTMS 0 0 0 6143 84770.03125 1.0 0 0.0 4 2 Carbamidomethyl (C),Oxidation (M) _LRC(Carbamidomethyl (C))CM(Oxidation (M))HRWPVC(Carbamidomethyl (C))_ ENSG00000146221|ENST00000371505|TCTE1 1.3295316138638542 0.8688751186870782 3 [VG]E{[YC]|[HE]}Q[RD]T 9 -1 16.105 0.0 0.0 1.0508 0.0 0.0 0.0 478.2012295765732 478.2012295765732 5.508767754104532 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.4247425010840047 0.5 [VG]E{[YC]|[HE]}Q[RD]T 1.0508 - 56 1 2.366 34089.5 0.4699999988079071 1207 4938 6143 HBL1_DMSO_200M_050219_1,6147 HBL1_DMSO_200M_050219_1,6147,LRCCMHRWPVC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6149 31.478 125.0 454240.0 25 0 49247.0 -1 EEIIRQMK 8 80 531.7849025026887 1061.5552520721774 2 531.7847167849541 MULTI CID FTMS 0 0 0 6148 441606.125 1.0 0 0.0 1 Oxidation (M) _EEIIRQM(Oxidation (M))K_ ENSG00000141698|ENST00000435506|NT5C3B;ENST00000469698.5_1_17:39981777-39991902:-|nuORF;nc|ENSG00000141698|Q969T7-2|NT5C3B 12.531546534597751 0.7257836412119636 3 {M(Oxidation (M))|F}K 2 -1 20.362 0.0 0.0 1.9181 0.0 0.0 768.4134196520587 0.0 768.4134196520587 0.0 9.904178299399858 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.2302046884880938 {M(Oxidation (M))|F}K 1.9181 + + 71 + 1 2.366 48203.0 1.0 1208 4939 6148 HBL1_DMSO_200M_050219_1,6149 HBL1_DMSO_200M_050219_1,6149,EEIIRQMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6150 31.482 241.0 534710.0 25 0 46467.0 + 39265 VAARMRHI 8 145 318.51999911194355 952.5381679360308 3 318.5199767947197 MULTI CID FTMS 0 0 0 6148 233545.953125 0.4333091732148879 -1 0.0495109558105468 2 Unmodified _VAARMRHI_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 26.34127834903884 0.4900704351052977 3 VA 2 6 35.551 0.0 0.0 3.7322 0.0 0.0 0.0 779.4107392050798 779.4107392050798 24.13082351138412 0.0 0.0 0.0 0 0.3076556684809653 1.3010299956639813 0.0 0.0 + VA 3.7322 + + 71 + 1 2.366 102568.5 1.0 1209 4939 6148 HBL1_DMSO_200M_050219_1,6150 HBL1_DMSO_200M_050219_1,6150,VAARMRHI False True VAARMRHI 31.482204 318.51997679472 1909010.75 6148.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;;nc|ENSG00000130816|P26358|DNMT1 3.1990124384562173 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6151 31.491 476.0 274310.0 25 0 52835.0 + + -1 SYAGGRGSY 9 141 459.209346864598 916.404140795996 2 459.2096435427666 MULTI CID FTMS 0 0 0 6148 197865.28125 0.5167939343760264 -1 0.0495109558105468 3 Oxidation (M) _YSALM(Oxidation (M))YPG_ nc|ENSG00000165119|P61978-3|HNRNPK;ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK 14.581692164780916 0.6954967302934248 3 GA[MT] 4 -1 21.114 0.0 0.0 2.304 0.0 0.0 538.2509022443375 0.0 538.2509022443375 0.0 10.276872757697744 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 GA[MT] 2.304 - 121 1 2.366 102724.0 1.0 1210 4939 6148 HBL1_DMSO_200M_050219_1,6151 HBL1_DMSO_200M_050219_1,6151,YSALMYPG False False SYAGGRGSY 31.490615 459.209643542767 1618734.625 6148.0 nc|ENSG00000165119|P61978-3|HNRNPK;;ENSG00000165119|ENST00000376263|HNRNPK;;nc|ENSG00000165119|P61978|HNRNPK 4.172266085942586 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6152 31.504 800.0 226300.0 25 0 16542.0 + 45646 YVPGLQTQN 9 174 510.26125363982976 1018.5079543464597 2 510.2615539431572 MULTI CID FTMS 0 0 0 6148 143915.375 0.6831366071623927 -1 0.0495109558105468 4 Unmodified _YVPGLQTQN_ nc|ENSG00000293412|O75343|GUCY1B2 34.40172386719151 0.1061884637610825 3 YPPN 4 6 43.761 0.0 0.0 4.2966 0.0 0.0 0.0 544.2746676080686 544.2746676080686 16.84955642535897 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.3252574989159953 YPPN 4.2966 - 1268 + 1 2.366 146667.6 0.6200000047683716 1211 4939 6148 HBL1_DMSO_200M_050219_1,6152 HBL1_DMSO_200M_050219_1,6152,YVPGLQTQN True False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6153 31.518 800.0 134420.0 25 0 6817.6 + 3288 AYHHGEQAL 9 167 513.2452270388603 0 513.2452270388603 PEAK CID FTMS 0 0 0 -1 0 5 Unmodified _AYHHGEQAL_ ENSG00000077097|ENST00000264331|TOP2B;nc|ENSG00000077097|Q02880-2|TOP2B 46.020951573049366 0.0425517664003206 3 AQEN 4 7 22.013 0.0 0.0 2.1487 0.0 0.0 131.09521292411517 448.15937219791255 579.2545851220277 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3252574989159953 0.0 AQEN 2.1487 - 387 + 1 2.366 87180.2 0.5799999833106995 1212 4939 6148 HBL1_DMSO_200M_050219_1,6153 HBL1_DMSO_200M_050219_1,6153,AYHHGEQAL True True AYHHGEQAL 31.518261 513.24522703886 471837.75 6148.0 nc|ENSG00000077097|Q02880-2|TOP2B;;ENSG00000077097|ENST00000264331|TOP2B 6.891233285268148 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6154 31.532 800.0 253110.0 25 0 25977.0 + 24885 MPNKVRKI 8 145 493.3021128338344 0 493.3023559451103 PEAK CID FTMS 0 0 0 6148 113536.1484375 0.5071857993544793 -1 0.0495109558105468 6 Unmodified _MPNKVRKI_ ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR 64.23631603340823 0.0061236158259023 3 PNKVR 5 3 39.979 0.0 0.0 4.0605 0.0 0.0 131.03873873857896 256.1676119440063 387.20635068258525 0.0 0.0 0.0 0.0 0 1.274227503252014 0.0 0.0 0.7059771852360797 + PNKVR 4.0605 + + 148 + 1 2.366 156290.7 0.5699999928474426 1213 4939 6148 HBL1_DMSO_200M_050219_1,6154 HBL1_DMSO_200M_050219_1,6154,MPNKVRKI True True MPNKVRKI 31.532075 493.30235594511 12442265.375 6148.0 ENSG00000160710|ENST00000368474|ADAR;;nc|ENSG00000160710|P55265-5|ADAR;;nc|ENSG00000160710|P55265-4|ADAR;;nc|ENSG00000160710|P55265-2|ADAR 4.805855909983317 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6155 31.539 408.0 186670.0 25 0 29234.0 + 6605 EAPTTAKV 8 113 408.72738135518097 815.440209777162 2 408.7263366580009 MULTI CID FTMS 0 0 0 6148 103123.640625 1.0 0 0.0 7 Unmodified _EAPTTAKV_ ENSG00000125637|ENST00000245796|PSD4;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;ENST00000418251.6_1_2:113943320-113958989:+|nuORF;ENST00000464559.1_1_2:113956206-113958989:+|nuORF;nc|ENSG00000125637|Q8NDX1-2|PSD4 10.073929032068715 0.7620901558688216 3 {[CP]|[EA]}PT 4 4 12.307 0.0 0.0 1.5093 0.0 0.0 0.0 414.2347506158813 414.2347506158813 1.822581265925436 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {[CP]|[EA]}PT 1.5093 + + 63 + 1 2.366 67639.8 1.0 1214 4939 6148 HBL1_DMSO_200M_050219_1,6155 HBL1_DMSO_200M_050219_1,6155,EAPTTAKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6156 31.553 800.0 232010.0 25 0 28191.0 13049 HAVTQACSM 9 183 474.20697500648185 946.3993970797636 2 474.2065307497978 MULTI CID FTMS 0 0 0 6148 92132.390625 0.6193378616155607 -1 0.0495109558105468 8 Unmodified _HAVTQACSM_ ENSG00000115596|ENST00000233948|WNT6 11.640296217721598 0.521594087909532 3 [HA]AQVT 6 6 45.393 0.0 0.0 4.7963 0.0 0.0 0.0 336.0689415997276 336.0689415997276 32.43378736925017 0.0 0.0 0.0 0 0.75 1.0 0.4247425010840047 0.0 [HA]AQVT 4.7963 - 316 1 2.366 146052.4 0.5 1215 4939 6148 HBL1_DMSO_200M_050219_1,6156 HBL1_DMSO_200M_050219_1,6156,HAVTQACSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6158 31.557 7.1 5654300.0 25 0 827380.0 + -1 CVPKTHFH 8 68 534.2590934377832 1066.5036339423664 2 534.2590209841728 MULTI CID FTMS 0 0 0 6157 8977320.0 1.0 0 0.0 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))C(Carbamidomethyl (C))VPKTHFH_ REV__ENST00000354371.6_1_2:238006612-238006942:+|nuORF 8.593279151180031 0.7721714526254883 3 [TP]ASSPSHV{[QG]|[NA]} 11 -1 + 42.99 0.0 0.0 4.0309 4.0309 73.933 0.0 0.0 0.0 0.2941046526635915 29.406018195723647 0.2941046526635915 3.010299956639805 0 0.8182503180159344 0.0 1.1989700043360187 0.0 [TP]ASSPSHV{[QG]|[NA]};[TP]ASPSSHV{[QG]|[NA]};[VP]YY{[QN]|[E{I|L}]|[KN]}V{[QG]|[NA]} 4.0309;3.7486;0.41508 -;-;- 129 1 2.352 37615.8 1.0 1216 4940 6157 HBL1_DMSO_200M_050219_1,6158 HBL1_DMSO_200M_050219_1,6158,CVPKTHFH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6159 31.559 26.0 2776000.0 25 0 431520.0 -1 TATRPITKM 9 90 517.7865055958047 1033.5584582584092 2 517.7867919802666 MULTI CID FTMS 0 0 0 6157 2478461.25 0.0101792079947192 94 -3.2593307495117188 2 Oxidation (M) _TATRPITKM(Oxidation (M))_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 19.361941925380144 0.3125782356748823 3 KTT[{I|L}P][WP]K 8 -1 44.86 0.0 0.0 4.3404 0.0 0.0 63.99659460063271 0.0 63.99659460063271 0.0 26.43868915092829 0.0 0.0 0 1.2614393726401687 0.0 1.3494850021680094 0.2887254899964357 KTT[{I|L}P][WP]K 4.3404 - 214 + 1 2.352 61629.6 1.0 1217 4940 6157 HBL1_DMSO_200M_050219_1,6159 HBL1_DMSO_200M_050219_1,6159,TATRPITKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6160 31.56 14.0 2908200.0 25 0 387820.0 + -1 TFQQNASSM 9 76 515.7108779917596 1029.4072030503191 2 515.7111694216728 MULTI CID FTMS 0 0 0 6157 4340413.5 1.0 0 0.0 3 Oxidation (M) _QENTYTQM(Oxidation (M))_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 18.13498045792455 0.6430038125133779 3 QQ{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}ASS{M(Oxidation (M))|F} 9 -1 QQ{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}A + + 23.857 2.2458 0.32533 2.3175 2.3175 49.151 0.0 0.0 0.0 0.0 9.784948323555172 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 QQ{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}ASS{M(Oxidation (M))|F} 2.3175 - 74 + 1 2.352 40209.7 1.0 1218 4940 6157 HBL1_DMSO_200M_050219_1,6160 HBL1_DMSO_200M_050219_1,6160,QENTYTQM False False TFQQNASSM 31.559812 515.711169421673 0.0 6157.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 0.9337631861368816 2.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6161 31.561 19.0 3006900.0 25 0 355390.0 + 24884 MPNKVRKI 8 71 329.204332569423 984.591168308469 3 329.2038452029228 MULTI CID FTMS 0 0 0 6157 2764993.75 1.0 0 0.0 4 Unmodified _MPNKVRKI_ ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR 28.486842064014134 0.4448922141344407 3 MPNKVR[K{I|L}] 8 0 + 46.987 0.0 0.0 4.7723 4.7723 84.111 0.0 0.0 0.0 35.72809446281443 2.764209843288903 2.764209843288903 9.262137858390808 0 0.0 0.0 0.0 0.7302046884880937 + + MPNKVR[K{I|L}];MPGGKVR[K{I|L}] 4.7723;3.8315 +;- + 66 + 1 2.352 55044.7 1.0 1219 4940 6157 HBL1_DMSO_200M_050219_1,6161 HBL1_DMSO_200M_050219_1,6161,MPNKVRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6162 31.562 34.0 2172000.0 25 0 299850.0 + 44309 YLNAFRHL 8 74 345.1908757322003 1032.550797796801 3 345.1894103884697 MULTI CID FTMS 0 0 0 6157 1305333.5 0.7666200254006474 3 -0.1710662841796875 5 Unmodified _YLNAFRHL_ REV__nc|ENSG00000118322|O94823-3|ATP10B 10.073929032068715 0.7620901558688216 3 Y{I|L}N{[NV]|[RG]}TA 7 -1 43.9 0.0 0.0 4.2517 0.0 0.0 0.0 254.12653528385 254.12653528385 28.84453538448566 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.805462187404089 Y{I|L}N{[NV]|[RG]}TA 4.2517 - 235 + 1 2.352 68629.2 1.0 1220 4940 6157 HBL1_DMSO_200M_050219_1,6162 HBL1_DMSO_200M_050219_1,6162,YLNAFRHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6163 31.565 113.0 639900.0 25 0 94450.0 -1 EKKLQNTMK 9 78 568.3107051521316 1134.6068573710631 2 568.3109008669853 MULTI CID FTMS 0 0 0 6157 636848.125 0.7342192758058703 -1 0.0801315307617187 6 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 3 QT{M(Oxidation (M))|F}K 4 -1 42.612 0.0 0.0 3.7557 0.0 0.0 612.3472881345382 0.0 612.3472881345382 0.0 12.617946363804547 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.2887254899964357 QT{M(Oxidation (M))|F}K 3.7557 - 298 + 1 2.352 61225.0 1.0 1221 4940 6157 HBL1_DMSO_200M_050219_1,6163 HBL1_DMSO_200M_050219_1,6163,EKKLQNTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6164 31.567 93.0 1105800.0 25 0 144200.0 + 39322 VAEPGQRKI 9 89 333.1980833958677 996.5724207878033 3 333.1978637576103 MULTI CID FTMS 0 0 0 6157 600496.875 0.2414236126990285 -1 0.0801315307617187 7 Unmodified _VAEPGQRKI_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 25.399314129420983 0.2080152500878129 3 VAEPGQ 6 3 46.075 0.0 0.0 4.6234 0.0 0.0 0.0 412.2699068658813 412.2699068658813 23.610921311779336 0.0 0.0 0.0 0 0.218765315847925 1.5228787452803376 0.0 0.3252574989159953 + VAEPGQ 4.6234 + + 101 + 1 2.352 87406.1 1.0 1222 4940 6157 HBL1_DMSO_200M_050219_1,6164 HBL1_DMSO_200M_050219_1,6164,VAEPGQRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6165 31.58 800.0 218600.0 25 0 32498.0 -1 0 143 464.2321194290358 463.2248429624358 1 464.2312194705009 MULTI CID FTMS 0 0 0 6157 236368.859375 1.0 0 0.0 8 3 DNK 3 -1 19.002 0.0 0.0 4.1021 0.0 0.0 88.04764066927017 0.0 88.04764066927017 0.0 2.7139292417341 0.0 0.0 0 0.0 0.0 0.0 0.6861818737241735 DNK 4.1021 - 95 + 1 2.352 136862.9 0.8700000047683716 1223 4940 6157 HBL1_DMSO_200M_050219_1,6165 HBL1_DMSO_200M_050219_1,6165, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6166 31.59 539.0 286740.0 25 0 24182.0 + 39323 VAEPGQRKI 9 134 499.2931755813882 996.5717982295764 2 499.2927734255791 MULTI CID FTMS 0 0 0 6157 154404.6875 0.277803984787365 -1 0.0801315307617187 9 Unmodified _VAEPGQRKI_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 47.74868867922204 0.0453060283459952 3 VAEPGQ[RK]{I|L} 9 0 + 66.852 0.0 0.0 6.7082 6.7082 85.824 0.0 0.0 0.0 43.17996372889921 0.3541293076616938 0.3541293076616938 5.070071809000609 0 1.4559771852360797 1.6989700043360187 0.5 0.7302046884880937 + + VAEPGQ[RK]{I|L};{I|L}GEPGQ[RK]{I|L};VAEPG[AG][RK]{I|L};{I|L}GEPG[AG][RK]{I|L};VA[{I|L}T]{I|L}{NN|[MP]|[D{I|L}]|[EV]}VGP;{I|L}G[{I|L}T]{I|L}{NN|[MP]|[D{I|L}]|[EV]}VGP;VAR[HV][R{M(Oxidation (M))|F}]{I|L};{I|L}GR[HV][R{M(Oxidation (M))|F}]{I|L};V{[QN]|[E{I|L}]|[KN]}RD{I|L}VGP;V{[RE]|[WV]}{I|L}{NN|[MP]|[D{I|L}]|[EV]}VGP 6.7082;6.1995;5.7842;5.2755;4.5015;3.9928;3.1445;2.6357;1.4059;1.0892 +;-;-;-;-;-;-;-;-;- + 1153 + 1 2.352 117429.2 1.0 1224 4940 6157 HBL1_DMSO_200M_050219_1,6166 HBL1_DMSO_200M_050219_1,6166,VAEPGQRKI True True VAEPGQRKI 31.589887 499.292773425579 10477495.0 6157.0 nc|ENSG00000134644|Q14671|PUM1;;nc|ENSG00000134644|Q14671-4|PUM1;;nc|ENSG00000134644|Q14671-2|PUM1;;ENSG00000134644|ENST00000426105|PUM1 2.844043731689453 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6167 31.604 800.0 103600.0 25 0 12339.0 + 39673 VEEKDPQSTN 10 114 573.7674971219011 1145.520441310602 2 573.7667724490166 MULTI CID FTMS 0 0 0 6157 140931.015625 1.0 0 0.0 10 Unmodified _VEEKDPQSTN_ REV__nc|ENSG00000105429|Q7Z7M0-2|MEGF8 45.739877483867886 0.1051543674217965 3 DPSQSTN 7 -1 60.834 0.0 0.0 5.3106 0.0 0.0 398.2176686017594 0.0 398.2176686017594 0.0 38.29325929582328 0.0 0.0 0 0.8807196863200843 0.0 0.9247425010840048 0.3807196863200844 DPSQSTN 5.3106 - 578 1 2.352 67222.7 0.7200000286102295 1225 4940 6157 HBL1_DMSO_200M_050219_1,6167 HBL1_DMSO_200M_050219_1,6167,VEEKDPQSTN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6168 31.618 800.0 70506.0 25 0 5347.2 -1 0 82 715.3242331327059 2142.9508699983176 3 715.3254882693291 MULTI CID FTMS 0 0 0 6157 132031.40625 1.0 0 0.0 11 3 [NP]{I|L}NE 5 -1 9.8768 0.0 0.0 0.46089 0.0 0.0 0.0 1572.660378625524 1572.660378625524 3.93462587345574 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}NE 0.46089 - 136 1 2.352 47119.9 0.6200000047683716 1226 4940 6157 HBL1_DMSO_200M_050219_1,6168 HBL1_DMSO_200M_050219_1,6168, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6169 31.631 800.0 147210.0 25 0 9852.6 19854 LHLLPTPY 8 149 477.2767516970634 0 477.2767516970634 PEAK CID FTMS 0 0 0 -1 0 12 Unmodified _LHLLPTPY_ ENST00000463947.5_1_3:52558507-52559018:-|nuORF 8.593279151180031 0.5573742999696857 3 H 1 7 6.9897 0.0 0.0 0.7338 0.0 0.0 113.08141809212404 699.3731814768653 812.4545995689894 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 0.7338 + + 54 + 1 2.352 94711.6 0.550000011920929 1227 4940 6157 HBL1_DMSO_200M_050219_1,6169 HBL1_DMSO_200M_050219_1,6169,LHLLPTPY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6171 31.636 17.0 2479300.0 25 0 319910.0 + 24720 MPDDHARKI 9 67 361.51862980715794 1081.534060021674 3 361.5184203982353 MULTI CID FTMS 0 0 0 6170 2621036.75 0.348733785470126 2 -0.0928230285644531 1 Unmodified _MPDDHARKI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 16.149105407346934 0.3995459350917656 3 MPDDHA 6 3 43.008 0.0 0.0 3.9766 0.0 0.0 0.0 412.2677096002563 412.2677096002563 16.977437731477423 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 + MPDDHA 3.9766 + + 36 + 1 2.342 41448.0 1.0 1228 4941 6170 HBL1_DMSO_200M_050219_1,6171 HBL1_DMSO_200M_050219_1,6171,MPDDHARKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6172 31.642 321.0 246470.0 25 0 20176.0 + 31481 RPWYWEWCTWQ 11 93 820.8556758367304 1639.6967987402606 2 820.8552123904228 MULTI CID FTMS 0 0 0 6170 309348.78125 0.4118834279427924 2 -0.0928230285644531 2 Unmodified _RPWYWEWCTWQ_ REV__ENST00000409198.5_2_2:152506865-152507290:-|nuORF 0.2690200627634905 0.8738786812967896 3 [EP]AEQGAA[EP]AEQGQE 16 -1 + 91.918 0.0 0.0 5.6058 5.6058 74.551 0.0 0.0 0.0 0.1372772263175647 0.1372772263175647 0.1372772263175647 0.1372772263175647 0 2.1989700043360187 1.0457574905606752 2.3737125054200234 0.3494850021680094 [EP]AEQGAA[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}EQNAE;[EP]AEQ[QA][EP]AEQGQE;[EP]AQEGAA[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}EQGGAE;[EP]AQE[QA][EP]AEQGQE;[EP]APNS{[SA]|[TG]}[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEEWQ{M(Oxidation (M))|F}QNAE 5.6058;5.5974;5.5551;5.4876;5.4222;5.383;5.3406;5.304;5.1943;5.1138 -;-;-;-;-;-;-;-;-;- 10363 1 2.342 58871.6 1.0 1229 4941 6170 HBL1_DMSO_200M_050219_1,6172 HBL1_DMSO_200M_050219_1,6172,RPWYWEWCTWQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6173 31.643 66.0 1060700.0 25 0 96560.0 + 26722 NYYEGPHTSH 10 87 402.1722490710213 1203.494917813264 3 402.1721069216728 MULTI CID FTMS 0 0 0 6170 636734.0625 0.1233285942396405 -6 0.3017749786376953 3 Unmodified _NYYEGPHTSH_ chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2;nc|ENSG00000101888|Q9NPJ8-3|NXT2 36.12702656103203 0.1984647928738587 3 [YN]YE[PG]HTSH 10 0 + 60.865 0.0 0.0 5.0574 5.0574 86.746 0.0 0.0 0.0 45.17902623875844 14.771212547196626 14.771212547196626 15.110534548150907 0 0.0 2.0 1.1022338482433751 0.0 + + [YN]YE[PG]HTSH;[YN]Y{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}TSH;[YN]YE[HN]{NN|[MP]|[D{I|L}]|[EV]}H;{[QN]|[E{I|L}]|[KN]}TH[PG]EY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}T[YQ]EY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YE][NP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}T{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[HS]QQ[PG]EY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 5.0574;3.8018;3.3153;2.3378;1.795;1.5448;1.0823;0.9633 +;-;-;-;-;-;-;- + 219 + 1 2.342 60603.5 1.0 1230 4941 6170 HBL1_DMSO_200M_050219_1,6173 HBL1_DMSO_200M_050219_1,6173,NYYEGPHTSH False True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 6174 31.65 359.0 268730.0 25 0 26741.0 + -1 MTVMESMTK 9 125 553.2329789187323 1104.4514049042646 2 553.2327758669853 MULTI CID FTMS 0 0 0 6170 213750.40625 0.6842175811774102 -3 0.2078857421875 4 3 Oxidation (M) _M(Oxidation (M))TVM(Oxidation (M))ESM(Oxidation (M))TK_ REV__ENSG00000158079|ENST00000620992|PTPDC1;REV__nc|ENSG00000158079|A2A3K4-2|PTPDC1;REV__nc|ENSG00000158079|A2A3K4|PTPDC1 7.289230182591677 0.6602208344931196 3 T{M(Oxidation (M))|F}K 3 -1 25.571 0.0 0.0 2.3152 0.0 0.0 710.2637961169584 0.0 710.2637961169584 0.0 10.113043428025042 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.2396518287104437 T{M(Oxidation (M))|F}K 2.3152 - 238 + 1 2.342 75814.8 1.0 1231 4941 6170 HBL1_DMSO_200M_050219_1,6174 HBL1_DMSO_200M_050219_1,6174,MTVMESMTK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6175 31.663 800.0 205140.0 25 0 22546.0 + 26724 NYYEGPHTSH 10 130 602.7545554076326 1203.494557882065 2 602.7548095583916 MULTI CID FTMS 0 0 0 6170 195151.28125 0.1634513266460975 -7 0.3531169891357422 5 Unmodified _NYYEGPHTSH_ chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2;nc|ENSG00000101888|Q9NPJ8-3|NXT2 92.4914307365334 0.009155046393728 3 [YN]YEGPHTSH 10 0 + 95.285 0.0 0.0 7.9173 7.9173 95.84 0.0 0.0 0.0 59.14574589218468 13.89075625191822 13.89075625191822 19.44660339379311 0 0.9247425010840048 2.0 2.091129063296272 0.0 + + [YN]YEGPHTSH;[YN]YPADHTSH;[YN]YEH[PG]TSH;[YN]Y{M(Oxidation (M))|F}WSTSH;[YN]YEGPHMPP;{[QN]|[E{I|L}]|[KN]}THPGEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]YEGPH[NP]N;[YN]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}GHTSH;[YN]Y{M(Oxidation (M))|F}HS[MD]K;[YN]YEGP[PG][NG]H 7.9173;6.3015;6.281;5.9157;5.651;5.4055;5.2895;5.2247;4.6796;4.6286 +;-;-;-;-;-;-;-;-;- + 4899 + 1 2.342 121772.2 0.8299999833106995 1232 4941 6170 HBL1_DMSO_200M_050219_1,6175 HBL1_DMSO_200M_050219_1,6175,NYYEGPHTSH True True NYYEGPHTSH 31.66346 602.754809558392 91177074.0 6170.0 nc|ENSG00000101888|Q9NPJ8-3|NXT2;;chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2 10.555771191914875 2.0 True 10.0 False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 6176 31.677 800.0 215930.0 25 0 21198.0 + 5720 DPLKGEGESAN 11 164 558.7620901947445 1115.5096274562889 2 558.7612792849541 MULTI CID FTMS 0 0 0 6170 177720.265625 0.3286002189185672 -2 0.1583747863769531 6 Unmodified _DPLKGEGESAN_ ENSG00000115760|ENST00000421745|BIRC6 55.50274090549119 0.0873970505193986 3 {[DA]|[EG]}[{I|L}V]DPSQSAN 11 6 + 94.76 0.0 0.0 8.4948 8.4948 95.341 0.0 0.0 0.0 10.457353338093723 61.94084508433175 10.457353338093723 11.79296398930893 0 1.3494850021680094 1.2218487496163564 2.110924374808178 0.6747425010840047 {[DA]|[EG]}[{I|L}V]DPSQSAN;[VG]{[QN]|[E{I|L}]|[KN]}DPSQSAN;[PS][{I|L}T]DPSQSAN;{[DA]|[EG]}[{I|L}V]DPSQGTN;{[DA]|[EG]}[{I|L}V]DPS[AG]SAN;[{I|L}T][PS]DPSQSAN;[VG]{[QN]|[E{I|L}]|[KN]}DPS[AG]SAN;[VP][WM]PSQSAN;[VG]{[QN]|[E{I|L}]|[KN]}DPSQGTN;[PS][{I|L}T]DPSQGTN 8.4948;7.4376;7.4131;7.1106;7.0716;6.7907;6.6193;6.1084;6.0534;6.0289 -;-;-;-;-;-;-;-;-;- 2629 1 2.342 133997.5 0.8100000023841858 1233 4941 6170 HBL1_DMSO_200M_050219_1,6176 HBL1_DMSO_200M_050219_1,6176,DPLKGEGESAN True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6177 31.691 800.0 75844.0 25 0 16746.0 -1 0 41 1125.1130769116671 3372.317401335202 3 1125.444750964642 MULTI CID FTMS 0 0 0 6170 147323.1875 0.0640146569622743 7 -0.2573738098144531 7 3 YC(Carbamidomethyl (C)) 2 -1 10.969 0.0 0.0 0.32527 0.0 0.0 1457.5231557804282 1588.6612032526002 3046.184359033028 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YC(Carbamidomethyl (C)) 0.32527 - 12 + 1 2.342 60203.1 0.550000011920929 1234 4941 6170 HBL1_DMSO_200M_050219_1,6177 HBL1_DMSO_200M_050219_1,6177, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6179 31.697 219.0 376500.0 25 0 51980.0 -1 VPCCFFFL 8 63 545.2495177076589 1088.4844824821178 2 545.2490722537041 MULTI CID FTMS 0 0 0 6178 254039.625 0.9777928422486882 3 -0.0733718872070312 1 2 Carbamidomethyl (C) _VPC(Carbamidomethyl (C))C(Carbamidomethyl (C))FFFL_ ENST00000369295.3_1_10:115805496-115805616:+|nuORF 6.354104778181461 0.7857632046190106 3 VP 2 -1 29.05 0.0 0.0 2.6689 0.0 0.0 0.0 889.3453716852812 889.3453716852812 2.22744203425297 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 VP 2.6689 + + 20 + 1 2.342 71135.7 1.0 1235 4942 6178 HBL1_DMSO_200M_050219_1,6179 HBL1_DMSO_200M_050219_1,6179,VPCCFFFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6180 31.702 232.0 325940.0 25 0 28522.0 + + 37460 TPRPGSHTI 9 89 483.2618948178964 964.5092367025928 2 483.2623779177666 MULTI CID FTMS 0 0 0 6178 303767.71875 0.7847878713749578 -1 0.0598430633544921 2 Unmodified _TLELEFTI_ ENSG00000132356|ENST00000397128|PRKAA1;nc|ENSG00000132356|Q13131-2|PRKAA1 30.22481116460888 0.4082965392918993 3 [{I|L}T]H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HT{I|L} 8 -1 + 51.679 0.0 0.0 5.3581 5.3581 87.792 0.0 0.0 0.0 12.508943624335558 35.11230030668848 12.508943624335558 14.730749808046326 0 0.6989700043360187 1.2218487496163564 1.086696871556164 0.0 [{I|L}T]H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HT{I|L};{I|L}QQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]}T{I|L};{I|L}{M(Oxidation (M))|F}[KC][Q{I|L}]T{I|L};[{I|L}T][DV][Y{I|L}]E{I|L};{I|L}QQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HPV 5.3581;3.8308;2.7588;2.1062;1.4291 -;-;-;-;- 203 1 2.342 63265.4 1.0 1236 4942 6178 HBL1_DMSO_200M_050219_1,6180 HBL1_DMSO_200M_050219_1,6180,TLELEFTI False False TPRPGSHTI 31.701784 483.262377917767 1287817.25 6178.0 ENSG00000132356|ENST00000397128|PRKAA1;;nc|ENSG00000132356|Q13131-2|PRKAA1 2.2922453184922538 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6181 31.715 789.0 340960.0 25 0 30821.0 + 3968 DALQKQREV 9 143 543.7986852058596 1085.582817478519 2 543.7985717654228 MULTI CID FTMS 0 0 0 6178 296769.0625 0.0799010885369697 -6 0.3317070007324219 3 Unmodified _DALQKQREV_ ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A 121.3458533713876 0.0010294253734974 3 DA{I|L}QKQREV 9 0 + 120.13 0.0 0.0 11.066 11.066 95.225 0.0 0.0 0.0 80.69397533491708 22.02591871710854 22.02591871710854 9.208187539523747 0 2.2302046884880937 1.6989700043360187 1.7051120522087029 1.4489700043360187 + + DA{I|L}QKQREV;DA{I|L}[AG]KQREV;DA{I|L}QK[AG]REV;DA{I|L}[AG]K[AG]REV;DA{I|L}QKQVWV;DA{I|L}[AG]KQVWV;DA{I|L}QK[AG]VWV;DA{I|L}QKVQWV;DA{I|L}V{[RE]|[WV]}REV;DA{I|L}QVKQWV 11.066;10.218;10.218;9.3737;9.209;8.3608;8.1305;8.0081;7.8034;7.3018 +;-;-;-;-;-;-;-;-;- + 5089 + 1 2.342 203364.2 1.0 1237 4942 6178 HBL1_DMSO_200M_050219_1,6181 HBL1_DMSO_200M_050219_1,6181,DALQKQREV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6182 31.724 489.0 165410.0 25 0 27690.0 + -1 KCIFRTMK 8 94 550.289100830268 0 550.2873412966728 PEAK CID FTMS 0 0 0 6178 126098.9140625 0.6562232378403643 -10 0.4673194885253906 4 Carbamidomethyl (C),Oxidation (M) _KC(Carbamidomethyl (C))IFRTM(Oxidation (M))K_ REV__ENSG00000008226|ENST00000308059|DLEC1;REV__ENST00000440294.6_1_3:38080716-38136583:+|nuORF;REV__nc|ENSG00000008226|Q9Y238-2|DLEC1;REV__nc|ENSG00000008226|Q9Y238-3|DLEC1 7.910154910731844 0.5650536163073903 3 T 1 -1 7.6587 0.0 0.0 0.69716 0.0 0.0 704.375028449385 290.11814294986567 994.4931713992509 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 T 0.69716 + + 40 + 1 2.342 65040.9 1.0 1238 4942 6178 HBL1_DMSO_200M_050219_1,6182 HBL1_DMSO_200M_050219_1,6182,KCIFRTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6185 31.732 52.0 1068600.0 25 0 111270.0 + 37461 TLELEFTI 8 71 322.5105072218069 964.5096922656209 3 322.5100890994072 MULTI CID FTMS 0 0 0 6184 957194.9375 0.9402502181928378 2 -0.0403995513916015 1 Unmodified _TLELEFTI_ REV__ENSG00000169220|ENST00000408923|RGS14;REV__ENST00000425155.6_1_5:176795054-176799073:+|nuORF;REV__nc|ENSG00000169220|O43566-5|RGS14;REV__nc|ENSG00000169220|O43566-6|RGS14 38.15118350030904 0.2652218139009398 3 HT{I|L}T 4 -1 36.67 0.0 0.0 3.8019 0.0 0.0 494.2599049298844 0.0 494.2599049298844 0.0 22.64645333192 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 HT{I|L}T 3.8019 - 38 1 2.336 50618.3 1.0 1239 4944 6184 HBL1_DMSO_200M_050219_1,6185 HBL1_DMSO_200M_050219_1,6185,TLELEFTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6186 31.734 49.0 1092800.0 25 0 93258.0 + 3970 DALQKQREV 9 85 362.86837896804616 1085.5833075043386 3 362.8681213259697 MULTI CID FTMS 0 0 0 6184 990312.1875 0.2122970616308814 -4 0.174957275390625 2 Unmodified _DALQKQREV_ ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A 34.93206674587334 0.1032771302489716 3 DA{I|L}QKQ{[RE]|[WV]}V 9 0 + 73.918 0.0 0.0 6.8091 6.8091 88.004 0.0 0.0 0.0 59.26981211747236 2.102868501927873 2.102868501927873 7.04628427264403 0 0.4247425010840047 2.0 0.5 0.8807196863200843 + + DA{I|L}QKQ{[RE]|[WV]}V;DA{I|L}QKH[Y{I|L}]V;DA{I|L}QK[AG]{[RE]|[WV]}V;DA{I|L}[AG]KQ{[RE]|[WV]}V;DA{I|L}[AG]KH[Y{I|L}]V 6.8091;6.16;5.9609;5.9609;5.3118 +;-;-;-;- + 126 + 1 2.336 48364.5 1.0 1240 4944 6184 HBL1_DMSO_200M_050219_1,6186 HBL1_DMSO_200M_050219_1,6186,DALQKQREV True True DALQKQREV 31.733717 362.86812132597 90648028.0 6184.0 nc|ENSG00000090889|O95239-2|KIF4A;;ENSG00000226650|ENST00000435029|KIF4B;;ENSG00000090889|ENST00000374403|KIF4A 5.206513961156209 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6187 31.737 158.0 580250.0 25 0 98236.0 + 45011 YPTEGNHRV 9 101 358.1772410079521 1071.5098936240563 3 358.1762878298759 MULTI CID FTMS 0 0 0 6184 122933.8828125 0.2490909558896579 -8 0.3685779571533203 3 Unmodified _YPTEGNHRV_ ENSG00000196290|ENST00000409020|NIF3L1;nc|ENSG00000196290|Q9GZT8-2|NIF3L1;nc|ENSG00000196290|Q9GZT8-3|NIF3L1 11.517880264261096 0.5249077435482886 3 YPTE 4 5 31.938 0.0 0.0 2.9807 0.0 0.0 0.0 578.2812322614388 578.2812322614388 16.64774413198912 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + YPTE 2.9807 + + 84 + 1 2.336 83336.2 1.0 1241 4944 6184 HBL1_DMSO_200M_050219_1,6187 HBL1_DMSO_200M_050219_1,6187,YPTEGNHRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6188 31.751 800.0 128310.0 25 0 6690.3 + 10868 GAETTGRP 8 159 394.6986582882843 0 394.6988403201103 PEAK CID FTMS 0 0 0 6184 122902.96875 1.0 0 0.0 4 Unmodified _GAETTGRP_ ENSG00000145113|ENST00000463781|MUC4;nc|ENSG00000145113|Q99102-10|MUC4;nc|ENSG00000145113|Q99102-11|MUC4;nc|ENSG00000145113|Q99102-15|MUC4;nc|ENSG00000145113|Q99102-16|MUC4;nc|ENSG00000145113|Q99102-17|MUC4;nc|ENSG00000145113|Q99102-2|MUC4;nc|ENSG00000145113|Q99102-3|MUC4;nc|ENSG00000145113|Q99102-5|MUC4;nc|ENSG00000145113|Q99102-7|MUC4;nc|ENSG00000145113|Q99102-8|MUC4;nc|ENSG00000145113|Q99102-9|MUC4 16.942295170755138 0.4635191396245973 3 Q 1 8 6.2814 0.0 0.0 0.79776 0.0 0.0 265.1370493873124 391.1641024225219 656.3011518098343 0.0 0.0 0.0 0.0 0 0.2302046884880938 0.0 0.0 0.0 Q 0.79776 - 60 + 1 2.336 82960.9 0.7599999904632568 1242 4944 6184 HBL1_DMSO_200M_050219_1,6188 HBL1_DMSO_200M_050219_1,6188,GAETTGRP False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6189 31.764 800.0 222070.0 25 0 33907.0 + 11101 DAYAHPQQKV 10 192 386.1980824450402 1155.5724179353206 3 386.1974365115166 MULTI CID FTMS 0 0 0 6184 123019.21875 0.8408419152309156 1 -0.0365009307861328 5 Unmodified _GEFLMPKPTH_ ENSG00000102871|ENST00000345057|TRADD;ENST00000566104.1_1_16:67189803-67193780:-|nuORF 7.477065608646677 0.69205068831198 3 {[DA]|[EG]}YAHVN 7 8 49.341 0.0 0.0 4.2698 0.0 0.0 0.0 382.22089563541255 382.22089563541255 17.074032404048012 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[DA]|[EG]}YAHVN 4.2698 - 405 + 1 2.336 143522.3 0.7400000095367432 1243 4944 6184 HBL1_DMSO_200M_050219_1,6189 HBL1_DMSO_200M_050219_1,6189,GEFLMPKPTH False False DAYAHPQQKV 31.76447 386.197436511517 756798.3125 6184.0 ENSG00000102871|ENST00000345057|TRADD;;ENST00000566104.1_1_16:67189803-67193780:-|nuORF 4.824730237325032 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6192 31.784 747.0 309900.0 25 0 47832.0 + 8813 EYDLAKGA 8 147 433.7165738007879 865.4185946683758 2 433.7161437869072 MULTI CID FTMS 0 0 0 6191 299606.5625 0.7508050820446773 2 -0.1202602386474609 1 Unmodified _EYDLAKGA_ REV__ENSG00000004766|ENST00000305866|VPS50;REV__nc|ENSG00000004766|Q96JG6-3|VPS50 48.345845343767074 0.1470278396477103 3 YED{I|L}AQK 7 -1 + 92.198 0.0 0.0 10.654 10.654 95.888 0.0 0.0 0.0 83.14880824391999 15.706450477518672 15.706450477518672 9.33053210369387 0 1.1549471895720984 2.0 0.4247425010840047 1.1487488337374077 YED{I|L}AQK;YED{I|L}A[AG]K;{NN|[MP]|[D{I|L}]|[EV]}E[KA]QY;Y[{I|L}P][WC(Carbamidomethyl (C))]K;{NN|[MP]|[D{I|L}]|[EV]}E[KA][AG]Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{NN|[MP]|[D{I|L}]|[EV]}QY;{[TV]|[{I|L}S]}GA{NN|[MP]|[D{I|L}]|[EV]}QY;{[TV]|[{I|L}S]}Q{NN|[MP]|[D{I|L}]|[EV]}QY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[KA]QY;Y[RN]{[NV]|[RG]}[NS] 10.654;9.5755;2.073;1.5058;0.99482;0.84436;0.68586;0.66576;0.44205;0.25605 -;-;-;-;-;-;-;-;-;- 324 + 1 2.336 182214.6 1.0 1244 4946 6191 HBL1_DMSO_200M_050219_1,6192 HBL1_DMSO_200M_050219_1,6192,EYDLAKGA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6193 31.797 800.0 180920.0 25 0 18492.0 + 3926 DALKHASNM 9 155 493.73935759630285 985.4641622594056 2 493.7396423220634 MULTI CID FTMS 0 0 0 6191 183511.3125 1.0 0 0.0 2 Unmodified _DALKHASNM_ ENSG00000069329|ENST00000299138|VPS35;ENST00000563400.1_1_16:34324914-34327021:+|nuORF;ENST00000568191.1_1_16:46715982-46717476:-|nuORF;ENST00000568784.6_1_16:46694386-46722246:-|nuORF 87.25819977447905 0.0157581688916699 3 DA{I|L}KHASNM 9 0 + 79.254 0.0 0.0 8.0423 8.0423 94.015 0.0 0.0 0.0 13.085456211725202 9.444826721501698 9.444826721501698 9.444826721501698 0 2.031718309096375 2.0 0.0 1.055462187404089 + + DA{I|L}KHASNM;DA{I|L}KHASMN;DA{I|L}[Y{I|L}]{M(Oxidation (M))|F}NM;{[DA]|[EG]}{I|L}KHAS[MN];DA{I|L}KHASGGM;DA{I|L}[Y{I|L}]{M(Oxidation (M))|F}MN;{[DA]|[EG]}{I|L}KHSA[MN];DA{I|L}[Y{I|L}]{M(Oxidation (M))|F}GGM;DA{I|L}MQQ[PS]P;DA{I|L}MH{[QN]|[E{I|L}]|[KN]}{[SA]|[TG]} 8.0423;7.0838;6.9146;6.403;6.3468;5.9562;5.6459;5.2338;5.101;4.8319 +;-;-;+;-;-;-;-;-;- + 1156 + 1 2.336 111903.8 0.959999978542328 1245 4946 6191 HBL1_DMSO_200M_050219_1,6193 HBL1_DMSO_200M_050219_1,6193,DALKHASNM True True DALKHASNM 31.797315 493.739642322063 891755.5 6191.0 ENST00000563400.1_1_16:34324914-34327021:+|nuORF;;ENST00000568191.1_1_16:46715982-46717476:-|nuORF;;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 8.47610060373942 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6194 31.811 800.0 314460.0 25 0 13041.0 + + 18797 LPASHATRV 9 274 317.85026461438304 950.5289644433492 3 317.8500854372978 MULTI CID FTMS 0 0 0 6191 134381.53125 1.0 0 0.0 3 Unmodified _LAPSHARSL_ nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2 14.218169984304629 0.4518140821082705 3 {I|L}PASHARS{I|L} 9 -1 + 51.561 0.0 0.0 5.4245 5.4245 78.803 0.0 0.0 0.0 3.0102999566398125 3.1742041185215086 3.0102999566398125 3.0102999566398125 0 0.0 0.0 0.3807196863200844 0.0 {I|L}PASHARS{I|L};P{I|L}ASHARS{I|L};{I|L}PASHARTV;{I|L}PASHK[NG]K;P{I|L}ASHARTV;P{I|L}ASHK[NG]K;{I|L}PASHKAD{I|L};{I|L}PASHKA{I|L}D;{I|L}PASHKAVE;P{I|L}ASHKAD{I|L} 5.4245;5.1078;5.0905;5.0344;4.7738;4.7177;4.7065;4.5212;4.5078;4.3898 -;-;-;-;-;-;-;-;-;- 680 + 1 2.336 199633.2 0.7099999785423279 1246 4946 6191 HBL1_DMSO_200M_050219_1,6194 HBL1_DMSO_200M_050219_1,6194,LAPSHARSL False False LPASHATRV 31.81113 317.850085437298 633463.6875 6191.0 nc|ENSG00000103197|P49815-2|TSC2;;nc|ENSG00000103197|P49815-3|TSC2;;nc|ENSG00000103197|P49815-5|TSC2;;nc|ENSG00000103197|P49815-4|TSC2;;ENSG00000103197|ENST00000219476|TSC2;;nc|ENSG00000103197|P49815-7|TSC2;;nc|ENSG00000103197|P49815-6|TSC2 6.925353527069092 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6195 31.825 800.0 175230.0 25 0 15575.0 + -1 LMVNIERE 8 131 510.26125363982976 1018.5079543464597 2 510.2613708376884 MULTI CID FTMS 0 0 0 6191 124468.421875 0.5908259309927437 6 -0.3121204376220703 4 Oxidation (M) _LM(Oxidation (M))VNIERE_ REV__ENSG00000162843|ENST00000437684|WDR64;REV__nc|ENSG00000162843|B1ANS9-2|WDR64;REV__nc|ENSG00000162843|B1ANS9|WDR64 23.1484247019978 0.5573009939494978 3 YPPN 4 -1 45.566 0.0 0.0 4.4738 0.0 0.0 0.0 544.2741182916624 544.2741182916624 17.149640954996954 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 0.0 0.3494850021680094 YPPN 4.4738 - 750 + 1 2.336 115138.2 0.8299999833106995 1247 4946 6191 HBL1_DMSO_200M_050219_1,6195 HBL1_DMSO_200M_050219_1,6195,LMVNIERE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6196 31.839 800.0 153140.0 25 0 14976.0 + 32147 RVPTANVS 8 166 422.2379492737628 842.4613456143255 2 422.2376586794853 MULTI CID FTMS 0 0 0 6191 104893.4453125 1.0 0 0.0 5 Unmodified _RVPTANVS_ ENSG00000111640|ENST00000229239|GAPDH;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;ENST00000466525.1_1_12:6646524-6647333:+|nuORF;nc|ENSG00000111640|P04406-2|GAPDH 18.1463463914782 0.6428359029697936 3 ANVS 4 4 17.875 0.0 0.0 2.1218 0.0 0.0 453.2703520576153 0.0 453.2703520576153 0.0 2.390690719683093 0.0 0.0 0 0.5172203223519531 0.0 0.0 0.0 + ANVS 2.1218 + + 189 1 2.336 98227.6 0.7599999904632568 1248 4946 6191 HBL1_DMSO_200M_050219_1,6196 HBL1_DMSO_200M_050219_1,6196,RVPTANVS False True RVPTANVS 31.838759 422.237658679485 592514.0625 6191.0 nc|ENSG00000111640|P04406-2|GAPDH;;ENST00000466525.1_1_12:6646524-6647333:+|nuORF;;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;;ENSG00000111640|ENST00000229239|GAPDH -0.1650435924530029 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6197 31.853 800.0 207170.0 25 0 10591.0 -1 GMIKPGVTTE 10 250 350.1810297970368 0 350.1823913455009 PEAK CID FTMS 0 0 0 6191 87436.0859375 1.0 0 0.0 6 Oxidation (M) _GM(Oxidation (M))IKPGVTTE_ ENSG00000164024|ENST00000296411|METAP1 3.5870582119611467 0.3961065659209837 3 D 1 -1 0.66484 0.0 0.0 0.095202 0.0 0.0 498.2309580542313 82.06693445377186 580.2978925080031 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0387254899964358 0.0 D 0.095202 - 4 + 1 2.336 129453.8 0.6399999856948853 1249 4946 6191 HBL1_DMSO_200M_050219_1,6197 HBL1_DMSO_200M_050219_1,6197,GMIKPGVTTE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6199 31.857 19.0 1616200.0 25 0 259570.0 + -1 QEISTMPFV 9 55 534.2590934377832 1066.5036339423664 2 534.2589599490166 MULTI CID FTMS 0 0 0 6198 2915522.5 0.324765353134343 7 -0.3512744903564453 1 Oxidation (M) _QEISTM(Oxidation (M))PFV_ REV__ENSG00000139985|ENST00000603540|ADAM21;REV__ENST00000529267.2_1_14:70712472-70713909:-|nuORF 7.289230182591677 0.6602208344931196 3 SV[HS]V{[QG]|[NA]} 7 -1 28.032 0.0 0.0 2.6284 0.0 0.0 354.15388686347814 0.0 354.15388686347814 0.0 11.403791535771427 0.0 0.0 0 0.5 0.0 0.8807196863200843 0.0 SV[HS]V{[QG]|[NA]} 2.6284 - 53 1 2.336 32176.0 1.0 1250 4947 6198 HBL1_DMSO_200M_050219_1,6199 HBL1_DMSO_200M_050219_1,6199,QEISTMPFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6200 31.859 72.0 876860.0 25 0 125940.0 + -1 IQRLETMK 8 79 517.7865055958047 1033.5584582584092 2 517.7866699099541 MULTI CID FTMS 0 0 0 6198 969854.1875 0.0039832567481585 101 -3.778257369995117 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 3 KTT[{I|L}P][WP]K 8 -1 46.788 0.0 0.0 4.5269 0.0 0.0 63.997612727186215 0.0 63.997612727186215 0.0 25.356668758921828 0.0 0.0 0 1.305462187404089 0.0 1.3494850021680094 0.2614393726401688 KTT[{I|L}P][WP]K 4.5269 - 192 + 1 2.336 57561.1 1.0 1251 4947 6198 HBL1_DMSO_200M_050219_1,6200 HBL1_DMSO_200M_050219_1,6200,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6201 31.861 125.0 545500.0 25 0 89603.0 -1 EKKLQNTMK 9 74 568.3107051521316 1134.6068573710631 2 568.3105956912041 MULTI CID FTMS 0 0 0 6198 569919.25 0.6570572834815597 6 -0.3144893646240234 3 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 3 T{M(Oxidation (M))|F}K 3 -1 44.253 0.0 0.0 3.9003 0.0 0.0 740.4190751101307 0.0 740.4190751101307 0.0 23.57840941039747 0.0 0.0 0 1.424742501084005 0.0 0.3807196863200844 0.0 T{M(Oxidation (M))|F}K 3.9003 + + 161 1 2.336 57743.0 1.0 1252 4947 6198 HBL1_DMSO_200M_050219_1,6201 HBL1_DMSO_200M_050219_1,6201,EKKLQNTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6202 31.863 82.0 779850.0 25 0 101550.0 + 44230 YLHQGLRF 8 82 345.1908757322003 1032.550797796801 3 345.1898071169853 MULTI CID FTMS 0 0 0 6198 451723.28125 0.2652962735928702 10 -0.5393733978271484 4 Unmodified _YLHQGLRF_ REV__ENSG00000165731|ENST00000355710|RET;REV__nc|ENSG00000165731|P07949-2|RET 6.2057823575117 0.7866635192979977 3 Y{I|L} 2 -1 20.969 0.0 0.0 2.0308 0.0 0.0 0.0 753.3765238621035 753.3765238621035 11.518637558036673 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 2.0308 + + 57 + 1 2.336 60136.0 1.0 1253 4947 6198 HBL1_DMSO_200M_050219_1,6202 HBL1_DMSO_200M_050219_1,6202,YLHQGLRF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6203 31.867 189.0 307660.0 25 0 30308.0 -1 TPMGPGRTV 9 86 466.23693866241285 0 466.2370178103447 PEAK CID FTMS 0 0 0 6198 279936.40625 0.5059567918667043 -5 0.1614761352539062 5 Oxidation (M) _TPM(Oxidation (M))GPGRTV_ ENSG00000116977|ENST00000366584|LGALS8;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;nc|ENSG00000116977|O00214-2|LGALS8 23.78978130925829 0.1667157386347964 3 P{M(Oxidation (M))|F}GP 4 -1 18.404 0.0 0.0 1.978 0.0 0.0 101.04788605962626 428.2263582818969 529.2742443415232 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{M(Oxidation (M))|F}GP 1.978 + + 41 + 1 2.336 54377.4 1.0 1254 4947 6198 HBL1_DMSO_200M_050219_1,6203 HBL1_DMSO_200M_050219_1,6203,TPMGPGRTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6204 31.881 800.0 103330.0 25 0 5546.2 + 12458 GTYYMPKRTAN 11 118 651.3208411219794 1300.6271293107586 2 651.3213378787041 MULTI CID FTMS 0 0 0 6198 181221.125 1.0 0 0.0 6 Unmodified _GTYYMPKRTAN_ REV__ENSG00000162391|ENST00000302250|FAM151A 19.361941925380144 0.6323962752489956 3 [PS]QSV{[TV]|[{I|L}S]}PSQSAN 13 -1 + 84.171 0.0 0.0 6.4715 6.4715 78.142 0.0 0.0 0.0 0.5491172848762744 9.072459467631006 0.5491172848762744 0.5491172848762744 0 1.6861818737241734 0.4559319556497244 2.061604235276773 0.3252574989159953 [PS]QSV{[TV]|[{I|L}S]}PSQSAN;{[SA]|[TG]}GPSV{[TV]|[{I|L}S]}PSQSAN;{[DA]|[EG]}{[NV]|[RG]}V{[TV]|[{I|L}S]}PSQSAN;{[QS]|[NT]}PSV{[TV]|[{I|L}S]}PSQSAN;{[DA]|[EG]}S[KP]{[TV]|[{I|L}S]}PSQSAN;[PS]QSV{[TV]|[{I|L}S]}PS[AG]SAN;{[SA]|[TG]}GPSV{[TV]|[{I|L}S]}PS[AG]SAN;[PS][AG]SV{[TV]|[{I|L}S]}PSQSAN;{[SA]|[TG]}D[KP]{[TV]|[{I|L}S]}PSQSAN;{[QS]|[NT]}PSV{[TV]|[{I|L}S]}PS[AG]SAN 6.4715;6.4293;6.2289;6.053;5.862;5.774;5.7335;5.5239;5.4032;5.3554 -;-;-;-;-;-;-;-;-;- 483 1 2.336 68599.5 0.6700000166893005 1255 4947 6198 HBL1_DMSO_200M_050219_1,6204 HBL1_DMSO_200M_050219_1,6204,GTYYMPKRTAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6205 31.889 444.0 380370.0 25 0 35552.0 + 13609 HPPPPPRLG 9 102 484.2771437612616 966.5397345893232 2 484.2771179080009 MULTI CID FTMS 0 0 0 6198 170208.4375 0.2252934265843488 -4 0.1284961700439453 7 Unmodified _HPPPPPRLG_ REV__ENSG00000156860|ENST00000356166|FBRS 34.10243960390752 0.1078313939113124 3 HPPPP 5 -1 51.788 0.0 0.0 5.3581 0.0 0.0 0.0 438.2479342096313 438.2479342096313 36.52415638548542 0.0 0.0 0.0 0 0.6171302707394362 1.154901959985743 0.0 0.0 HPPPP 5.3581 + + 131 + 1 2.336 134185.3 1.0 1256 4947 6198 HBL1_DMSO_200M_050219_1,6205 HBL1_DMSO_200M_050219_1,6205,HPPPPPRLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6207 31.906 800.0 101390.0 25 0 8838.9 + 43162 VYQQTSHM 8 125 497.2267606849524 0 497.2271606326103 PEAK CID FTMS 0 0 0 6206 24884.9921875 0.253686858212538 1 -0.0557403564453125 1 Unmodified _VYQQTSHM_ ENSG00000102908|ENST00000349945|NFAT5;nc|ENSG00000102908|O94916-2|NFAT5;nc|ENSG00000102908|O94916-4|NFAT5;nc|ENSG00000102908|O94916|NFAT5 53.57557251787612 0.0922062863852794 3 QQTST 5 4 30.578 0.0 0.0 3.0811 0.0 0.0 262.1297776181486 182.04700647525627 444.1767840934049 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.8807196863200843 0.9247425010840048 QQTST 3.0811 - 143 + 1 2.338 65532.4 0.5 1257 4948 6206 HBL1_DMSO_200M_050219_1,6207 HBL1_DMSO_200M_050219_1,6207,VYQQTSHM True True VYQQTSHM 31.905973 497.22716063261 497723.125 6206.0 nc|ENSG00000102908|O94916-2|NFAT5;;nc|ENSG00000102908|O94916-4|NFAT5;;ENSG00000102908|ENST00000349945|NFAT5;;nc|ENSG00000102908|O94916|NFAT5 5.041064739227295 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6208 31.917 605.0 183430.0 25 0 28023.0 -1 0 128 457.2081132973842 456.2008368307842 1 457.2080261111259 MULTI CID FTMS 0 0 0 6206 139645.296875 0.700777808331724 -4 0.1606597900390625 2 3 {M(Oxidation (M))|F}YQ 3 -1 + 43.457 0.0 0.0 9.5259 9.5259 98.806 0.0 0.0 0.0 13.723637474483468 18.05462187404089 13.723637474483468 43.45735111951792 0 0.2215141619232908 0.0 0.0 0.805462187404089 {M(Oxidation (M))|F}YQ 9.5259 - 51 + 1 2.338 90287.3 1.0 1258 4948 6206 HBL1_DMSO_200M_050219_1,6208 HBL1_DMSO_200M_050219_1,6208, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6209 31.93 800.0 101700.0 25 0 5882.6 + -1 VSCWCYYC 8 124 570.7006736751615 1139.386794417123 2 570.7005493044853 MULTI CID FTMS 0 0 0 6206 117232.34375 0.9437362805718842 -2 0.1202602386474609 3 2 Carbamidomethyl (C) _VSC(Carbamidomethyl (C))WC(Carbamidomethyl (C))YYC_ REV__ENST00000388967.3_1_3:36809324-36810203:-|nuORF 2.577480529830294 0.808687252328423 3 [VS]QH 4 -1 19.931 0.0 0.0 1.7493 0.0 0.0 0.0 685.1450701341729 685.1450701341729 7.786545256583741 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VS]QH 1.7493 - 306 1 2.338 67415.0 0.550000011920929 1259 4948 6206 HBL1_DMSO_200M_050219_1,6209 HBL1_DMSO_200M_050219_1,6209,VSCWCYYC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6210 31.944 800.0 111870.0 25 0 5845.7 -1 CCQYDYCNSWS 11 130 495.8327277122283 1484.476353736885 3 496.1663085818291 MULTI CID FTMS 0 0 0 6206 99256.0625 0.952518174824542 -2 0.1202602386474609 4 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))QYDYCNSWS_ ENSG00000240053|ENST00000375864|LY6G5B;nc|ENSG00000240053|Q8NDX9-2|LY6G5B 0.0833504608790944 0.8747546825782322 3 [YV][YC(Carbamidomethyl (C))]Q 5 -1 14.437 0.0 0.0 0.97253 0.0 0.0 0.0 768.1727398054974 768.1727398054974 2.8153833478253567 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [YV][YC(Carbamidomethyl (C))]Q 0.97253 - 133 1 2.338 75292.9 0.5099999904632568 1260 4948 6206 HBL1_DMSO_200M_050219_1,6210 HBL1_DMSO_200M_050219_1,6210,CCQYDYCNSWS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6212 31.949 15.0 4121900.0 25 0 421050.0 + 26723 NYYEGPHTSH 10 87 402.1722490710213 1203.494917813264 3 402.1721069216728 MULTI CID FTMS 0 0 0 6211 3231384.75 0.6258847486503243 2 -0.0936355590820312 1 Unmodified _NYYEGPHTSH_ chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2;nc|ENSG00000101888|Q9NPJ8-3|NXT2 34.40172386719151 0.2166836008404837 3 [YN]YEGPHTSH 10 0 + 73.136 0.0 0.0 6.077 6.077 91.611 0.0 0.0 0.0 52.10577133345943 14.51544993495972 14.51544993495972 32.730012720637376 0 0.0 2.0 0.5 0.0 + + [YN]YEGPHTSH;{[QN]|[E{I|L}]|[KN]}THPGEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YE]{[RE]|[WV]}GEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[NS]AAHPGEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}T[YQ]EY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN][QA]HE[DP][KC];[NS]AA[YQ]EY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[NS]PYEH[QA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 6.077;3.3574;3.1028;2.3458;1.5067;0.89307;0.4915;0.47291 +;-;-;-;-;-;-;- + 262 + 1 2.338 51963.1 1.0 1261 4949 6211 HBL1_DMSO_200M_050219_1,6212 HBL1_DMSO_200M_050219_1,6212,NYYEGPHTSH False True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 6213 31.95 66.0 626650.0 25 0 101570.0 + 26725 NYYEGPHTSH 10 54 602.7545554076326 1203.494557882065 2 602.7547485232353 MULTI CID FTMS 0 0 0 6211 839015.9375 0.7027279922693014 1 -0.051797866821289 2 Unmodified _NYYEGPHTSH_ chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2;nc|ENSG00000101888|Q9NPJ8-3|NXT2 62.57269311338072 0.0298375429882549 3 [YN]YEGPHTSH 10 0 + 80.303 0.0 0.0 6.6725 6.6725 93.053 0.0 0.0 0.0 64.84086850018159 14.146518864155126 14.146518864155126 22.75698788007091 0 0.9247425010840048 2.0 1.274227503252014 0.0 + + [YN]YEGPHTSH;[YN]Y{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}TSH;{[QN]|[E{I|L}]|[KN]}THPGEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]{[QN]|[E{I|L}]|[KN]}{[CT]|[{M(Oxidation (M))|F}G]}HTSH;[YN]YED{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}T[YQ]EY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]Y[WH]Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]Y{M(Oxidation (M))|F}H{[ET]|[MV]}[KC];[YN][EP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]Y[WQ][TA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 6.6725;4.7816;4.0992;3.6858;3.309;2.999;2.7956;2.7748;2.7096;2.5856 +;-;-;-;-;-;-;-;-;- + 273 + 1 2.338 34707.4 1.0 1262 4949 6211 HBL1_DMSO_200M_050219_1,6213 HBL1_DMSO_200M_050219_1,6213,NYYEGPHTSH True True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 6214 31.953 148.0 507780.0 25 0 95005.0 + 39306 VAEDRTRVV 9 84 348.864862829186 1043.572759087758 3 348.8644286990166 MULTI CID FTMS 0 0 0 6211 352318.09375 0.2710549153251737 -2 0.0917949676513671 3 Unmodified _VAEDRTRVV_ ENSG00000143641|ENST00000366672|GALNT2;nc|ENSG00000143641|Q10471-2|GALNT2 39.94969957227396 0.0757326808254658 3 VAEDR 5 4 60.477 0.0 0.0 5.7952 0.0 0.0 0.0 470.2699373834594 470.2699373834594 48.00312209084183 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.3807196863200844 0.3494850021680094 + VAEDR 5.7952 + + 42 + 1 2.338 77853.0 1.0 1263 4949 6211 HBL1_DMSO_200M_050219_1,6214 HBL1_DMSO_200M_050219_1,6214,VAEDRTRVV True True VAEDRTRVV 31.953364 348.864428699017 14309908.625 6211.0 nc|ENSG00000143641|Q10471-2|GALNT2;;ENSG00000143641|ENST00000366672|GALNT2 5.567212184270223 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6215 31.967 800.0 128480.0 25 0 12493.0 7458 EGPKETPSSAN 11 141 558.7620901947445 1115.5096274562889 2 558.7620727419853 MULTI CID FTMS 0 0 0 6211 202134.078125 0.3737407328825996 6 -0.3064613342285156 4 Unmodified _EGPKETPSSAN_ ENSG00000151929|ENST00000369085|BAG3 29.43715596616401 0.4010092210691691 3 {[DA]|[EG]}[{I|L}V]DPSQSAN 11 5 + 86.719 0.0 0.0 7.7739 7.7739 91.93 0.0 0.0 0.0 12.218265928650524 61.79738277878332 12.218265928650524 9.128498242810991 0 1.3494850021680094 1.2218487496163564 1.805462187404089 0.0 {[DA]|[EG]}[{I|L}V]DPSQSAN;{[DA]|[EG]}[{I|L}V]DPS[AG]SAN;[PS][{I|L}T]DPSQSAN;[VG]{[QN]|[E{I|L}]|[KN]}DPSQSAN;[PS][{I|L}T]DPS[AG]SAN;[VG]{[QN]|[E{I|L}]|[KN]}DPS[AG]SAN;{[WN]|[YH]}{[NV]|[RG]}PSQSAN;[VP][WM]PSQSAN;{[DA]|[EG]}[{I|L}V]D[VG]QDAN;{[WN]|[YH]}{[NV]|[RG]}PS[AG]SAN 7.7739;6.9556;6.3985;6.2876;5.5802;5.4693;5.3145;5.0447;4.5854;4.493 -;-;-;-;-;-;-;-;-;- 746 1 2.338 82004.1 0.7300000190734863 1264 4949 6211 HBL1_DMSO_200M_050219_1,6215 HBL1_DMSO_200M_050219_1,6215,EGPKETPSSAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6216 31.974 365.0 323850.0 25 0 85712.0 + 39308 VAEDRTRVV 9 95 522.7932356679771 1043.571918402754 2 522.7930786013603 MULTI CID FTMS 0 0 0 6211 142452.5625 0.3467153751021097 -3 0.1760005950927734 5 Unmodified _VAEDRTRVV_ ENSG00000143641|ENST00000366672|GALNT2;nc|ENSG00000143641|Q10471-2|GALNT2 47.74868867922204 0.0453060283459952 3 VAED 4 5 36.95 0.0 0.0 3.5408 0.0 0.0 0.0 626.3737273742062 626.3737273742062 25.981362441963327 0.0 0.0 0.0 0 0.7742275032520141 1.3010299956639813 0.0 0.0 + VAED 3.5408 + + 139 + 1 2.338 96474.7 1.0 1265 4949 6211 HBL1_DMSO_200M_050219_1,6216 HBL1_DMSO_200M_050219_1,6216,VAEDRTRVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6217 31.982 476.0 115420.0 25 0 11702.0 26493 NTTVPSGGV 9 104 416.21189489490695 0 416.2112914919853 PEAK CID FTMS 0 0 0 6211 103922.8671875 1.0 0 0.0 6 Unmodified _NTTVPSGGV_ ENSG00000105792|ENST00000389297|CFAP69;nc|ENSG00000105792|A5D8W1-2|CFAP69;nc|ENSG00000105792|A5D8W1-5|CFAP69 7.289230182591677 0.3433663536648894 3 G 1 8 3.9794 0.0 0.0 0.47921 0.0 0.0 702.3140047782921 68.05127130679921 770.3652760850913 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 0.47921 + + 12 + 1 2.338 46161.0 1.0 1266 4949 6211 HBL1_DMSO_200M_050219_1,6217 HBL1_DMSO_200M_050219_1,6217,NTTVPSGGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6218 31.996 800.0 95924.0 25 0 6781.7 -1 ETEHMDCSD 9 104 562.185668608171 0 562.1871826052666 PEAK CID FTMS 0 0 0 6211 96055.390625 0.8203675726919082 -1 0.0557403564453125 7 Carbamidomethyl (C) _ETEHMDC(Carbamidomethyl (C))SD_ ENSG00000164989|ENST00000380701|CCDC171;nc|ENSG00000164989|Q6TFL3-3|CCDC171;nc|ENSG00000164989|Q6TFL3-4|CCDC171 4.3292370932331545 0.3444685223463734 3 G 1 -1 5.4846 0.0 0.0 0.48866 0.0 0.0 985.308900227281 77.00396143131093 1062.3128616585918 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.48866 - 11 + 1 2.338 61844.5 0.4900000095367431 1267 4949 6211 HBL1_DMSO_200M_050219_1,6218 HBL1_DMSO_200M_050219_1,6218,ETEHMDCSD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6220 32.001 28.0 1892700.0 25 0 173790.0 + 3971 DALQKQREV 9 90 362.86837896804616 1085.5833075043386 3 362.8681213259697 MULTI CID FTMS 0 0 0 6219 1914002.0 0.4103120265351983 2 -0.0843219757080078 1 Unmodified _DALQKQREV_ ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A 41.95555342248728 0.0647214845423414 3 DA{I|L}QKQ{[RE]|[WV]}V 9 0 + 76.801 0.0 0.0 7.0746 7.0746 90.955 0.0 0.0 0.0 64.91672681950956 4.659738939438654 4.659738939438654 9.208187539523747 0 0.4247425010840047 2.0 0.8494850021680094 0.8252574989159953 + + DA{I|L}QKQ{[RE]|[WV]}V;DA{I|L}QK[AG]{[RE]|[WV]}V;DA{I|L}[AG]KQ{[RE]|[WV]}V;DA{I|L}QKH[Y{I|L}]V;DA{I|L}[AG]KH[Y{I|L}]V 7.0746;6.2264;6.2264;5.6259;4.7777 +;-;-;-;- + 197 + 1 2.338 49900.3 1.0 1268 4950 6219 HBL1_DMSO_200M_050219_1,6220 HBL1_DMSO_200M_050219_1,6220,DALQKQREV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6221 32.002 36.0 1464800.0 25 0 149340.0 + 3969 DALQKQREV 9 68 543.7986852058596 1085.582817478519 2 543.7988159060478 MULTI CID FTMS 0 0 0 6219 1670483.875 0.4497553716400452 2 -0.0843219757080078 2 Unmodified _DALQKQREV_ ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A 51.41523569358685 0.0372669606867193 3 DA{I|L}QKQ 6 3 76.943 0.0 0.0 7.0877 0.0 0.0 0.0 399.2006929986938 399.2006929986938 69.2672223044756 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.7302046884880937 + DA{I|L}QKQ 7.0877 + + 76 + 1 2.338 49443.2 1.0 1269 4950 6219 HBL1_DMSO_200M_050219_1,6221 HBL1_DMSO_200M_050219_1,6221,DALQKQREV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6222 32.005 149.0 757170.0 25 0 92451.0 + 45012 YPTEGNHRV 9 107 358.1772410079521 1071.5098936240563 3 358.1767455935478 MULTI CID FTMS 0 0 0 6219 431495.25 0.8743038275971393 -2 0.1075382232666015 3 Unmodified _YPTEGNHRV_ ENSG00000196290|ENST00000409020|NIF3L1;nc|ENSG00000196290|Q9GZT8-2|NIF3L1;nc|ENSG00000196290|Q9GZT8-3|NIF3L1 37.07464296494664 0.0915153923251136 3 YPTEGNH[RV] 9 0 + 68.668 0.0 0.0 6.4085 6.4085 84.211 0.0 0.0 0.0 34.6657624451305 1.0822685886482477 1.0822685886482477 4.623979978989553 0 0.0 1.0457574905606752 0.805462187404089 0.7302046884880937 + + YPTEGNH[RV];YPTEGN[RV]H;YPTEGGGH[RV];[TP]{[{M(Oxidation (M))|F}H]|[RQ]}VET{[QN]|[E{I|L}]|[KN]};YPTEGGG[RV]H;[TP]{[{M(Oxidation (M))|F}H]|[RQ]}EVT{[QN]|[E{I|L}]|[KN]};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}VMV{[QN]|[E{I|L}]|[KN]};[TP]C(Carbamidomethyl (C))[RP]VT{[QN]|[E{I|L}]|[KN]};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}ETV{[QN]|[E{I|L}]|[KN]};[TP]C(Carbamidomethyl (C))[RP]TV{[QN]|[E{I|L}]|[KN]} 6.4085;5.977;5.5491;5.1819;5.1176;4.8479;4.6664;4.567;4.3324;4.0515 +;-;-;-;-;-;-;-;-;- + 187 + 1 2.338 100340.3 1.0 1270 4950 6219 HBL1_DMSO_200M_050219_1,6222 HBL1_DMSO_200M_050219_1,6222,YPTEGNHRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6223 32.01 302.0 361390.0 25 0 40133.0 + + 19811 VAPPKAHEV 9 127 316.515210733926 946.523802801978 3 316.5149719119072 MULTI CID FTMS 0 0 0 6219 193169.28125 0.4938542818296414 -3 0.1435928344726562 4 Unmodified _LGVPRGVSY_ ENST00000512621.5_1_4:99993722-100006301:-|nuORF;ENST00000508511.5_1_4:99997418-100009857:-|nuORF;ENST00000507102.5_2_4:100003111-100009857:-|nuORF;ENSG00000187758|ENST00000209668|ADH1A;ENSG00000198099|ENST00000265512|ADH4;ENSG00000248144|ENST00000515683|ADH1C;ENSG00000197894|ENST00000296412|ADH5;nc|ENSG00000198099|P08319-2|ADH4 18.373094154950223 0.3393451798331396 3 {[VA]|[{I|L}G]}PPKA 6 -1 42.638 0.0 0.0 4.5047 0.0 0.0 0.0 380.1571138971313 380.1571138971313 13.975993204333149 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}PPKA 4.5047 - 334 + 1 2.338 92265.4 1.0 1271 4950 6219 HBL1_DMSO_200M_050219_1,6223 HBL1_DMSO_200M_050219_1,6223,LGVPRGVSY False False VAPPKAHEV 32.010266 316.514971911907 2454250.75 6219.0 ENST00000512621.5_1_4:99993722-100006301:-|nuORF;;ENST00000508511.5_1_4:99997418-100009857:-|nuORF;;ENST00000507102.5_2_4:100003111-100009857:-|nuORF;;ENSG00000187758|ENST00000209668|ADH1A;;ENSG00000198099|ENST00000265512|ADH4;;ENSG00000248144|ENST00000515683|ADH1C;;ENSG00000197894|ENST00000296412|ADH5;;nc|ENSG00000198099|P08319-2|ADH4 6.629386107126872 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6224 32.024 800.0 352010.0 25 0 73901.0 + 33934 SLGQRQNAV 9 129 486.7647948882757 971.5150368433514 2 486.7643310427666 MULTI CID FTMS 0 0 0 6219 183308.75 0.0917454380813856 -3 0.1435928344726562 5 Unmodified _SLGQRQNAV_ THE1A-int_dup1220|chr14:20666209-20666632:-|1.0189991849943123|0.0537726997029046|4.24|44.0|24|3|anti-sense 34.10243960390752 0.1078313939113124 3 D{I|L}GRQREV 8 4 + 47.501 0.0 0.0 4.8894 4.8894 80.089 0.0 0.0 0.0 5.45460896986193 7.95371572735597 5.45460896986193 5.45460896986193 0 1.2346368802282015 1.3010299956639813 0.4247425010840047 0.3494850021680094 D{I|L}GRQREV;VEGRQREV;{NN|[MP]|[D{I|L}]|[EV]}GREV{[{M(Oxidation (M))|F}H]|[RQ]};D{I|L}GRQ{NN|[MP]|[D{I|L}]|[EV]}R;{NN|[MP]|[D{I|L}]|[EV]}[WR]V{[VA]|[{I|L}G]}N;VEGRQ{NN|[MP]|[D{I|L}]|[EV]}R;{[VA]|[{I|L}G]}RDEV{[{M(Oxidation (M))|F}H]|[RQ]};DVARQREV;{NN|[MP]|[D{I|L}]|[EV]}GRE[R{I|L}]N;D{I|L}GRQ{[QG]|[NA]}[KA] 4.8894;4.328;4.2329;4.0707;3.5203;3.5093;3.5023;3.4492;3.2535;3.1654 -;-;-;-;-;-;-;-;-;- 850 + 1 2.338 223015.9 0.699999988079071 1272 4950 6219 HBL1_DMSO_200M_050219_1,6224 HBL1_DMSO_200M_050219_1,6224,SLGQRQNAV True False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 6225 32.038 800.0 195790.0 25 0 13314.0 16574 KDILSPNK 8 148 457.76889646934205 913.523240005484 2 457.7683593630791 MULTI CID FTMS 0 0 0 6219 141496.65625 0.6446871744585649 -2 0.1075382232666015 6 Unmodified _KDILSPNK_ ENSG00000162779|ENST00000367618|AXDND1;ENST00000461179.2_1_1:179339175-179437601:+|nuORF;nc|ENSG00000162779|Q5T1B0-2|AXDND1 43.85829265575387 0.1697421968005898 3 AADNK 5 6 39.456 0.0 0.0 4.3191 0.0 0.0 396.2728749005875 0.0 396.2728749005875 0.0 15.845658707349166 0.0 0.0 0 1.555462187404089 0.0 0.0 0.0 AADNK 4.3191 - 386 1 2.338 124123.6 0.5699999928474426 1273 4950 6219 HBL1_DMSO_200M_050219_1,6225 HBL1_DMSO_200M_050219_1,6225,KDILSPNK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6227 32.055 800.0 125320.0 25 0 9834.2 + 45013 YPTEGNHRV 9 120 536.762710039984 1071.510867146768 2 536.7629882693291 MULTI CID FTMS 0 0 0 6226 78053.0390625 0.5771199540651106 -1 0.0418376922607421 1 Unmodified _YPTEGNHRV_ ENSG00000196290|ENST00000409020|NIF3L1;nc|ENSG00000196290|Q9GZT8-2|NIF3L1;nc|ENSG00000196290|Q9GZT8-3|NIF3L1 51.41523569358685 0.0372669606867193 3 YPTEGNH[RV] 9 0 + 66.582 0.0 0.0 6.2138 6.2138 84.687 0.0 0.0 0.0 48.5223656718172 2.654171688421556 2.654171688421556 5.576408515395492 0 0.3494850021680094 2.0 0.8494850021680094 0.7302046884880937 + + YPTEGNH[RV];YPTV[HQ][KC]P;YPTV[YT]S{[QN]|[E{I|L}]|[KN]};YPTEGGGH[RV];YPVT[HQ][KC]P;YPVT[YT]S{[QN]|[E{I|L}]|[KN]};YP[{M(Oxidation (M))|F}E][YV][RV];[TP]{[{M(Oxidation (M))|F}H]|[RQ]}EVT{[QN]|[E{I|L}]|[KN]};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}VET{[QN]|[E{I|L}]|[KN]};YP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}G{I|L}S{[QN]|[E{I|L}]|[KN]} 6.2138;5.6934;5.6806;5.3545;5.0572;5.0444;4.2137;4.1456;3.9812;3.782 +;-;-;-;-;-;-;-;-;- + 488 + 1 2.338 87892.9 0.5 1274 4951 6226 HBL1_DMSO_200M_050219_1,6227 HBL1_DMSO_200M_050219_1,6227,YPTEGNHRV True True YPTEGNHRV 32.054953 536.762988269329 11508074.375 6226.0 ENSG00000196290|ENST00000409020|NIF3L1;;nc|ENSG00000196290|Q9GZT8-2|NIF3L1;;nc|ENSG00000196290|Q9GZT8-3|NIF3L1 6.91195805867513 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6228 32.056 43.0 1923300.0 25 0 118790.0 + 4924 DGLRQREV 8 98 324.84563080856674 971.5150630259002 3 324.8453552126884 MULTI CID FTMS 0 0 0 6226 1447405.875 0.32349918466199 -2 0.0936355590820312 2 Unmodified _DGLRQREV_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000569569.5_1_16:56966069-56970730:+|nuORF;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 29.081581746732265 0.4323690340403521 3 DG{I|L}VGQ{[RE]|[WV]}V 9 2 + 64.157 0.0 0.0 6.6038 6.6038 86.716 0.0 0.0 0.0 51.93849255422292 2.420299789533402 2.420299789533402 6.478174818886373 0 0.0 1.2218487496163564 0.0 0.9876954943324544 DG{I|L}VGQ{[RE]|[WV]}V;DG{I|L}RQ{[RE]|[WV]}V;DGV{I|L}GQ{[RE]|[WV]}V;DG{I|L}VG[AG]{[RE]|[WV]}V;DVAVGQ{[RE]|[WV]}V;DGV{I|L}G[AG]{[RE]|[WV]}V;DG{I|L}R[AG]{[RE]|[WV]}V;DG{I|L}VG[KG]{NN|[MP]|[D{I|L}]|[EV]}V;DVARQ{[RE]|[WV]}V;DVG{I|L}GQ{[RE]|[WV]}V 6.6038;5.937;5.9342;5.656;5.3588;4.9864;4.9836;4.9365;4.692;4.6892 -;+;-;-;-;-;-;-;-;- + 229 + 1 2.338 71490.2 1.0 1275 4951 6226 HBL1_DMSO_200M_050219_1,6228 HBL1_DMSO_200M_050219_1,6228,DGLRQREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6229 32.067 594.0 188790.0 25 0 20760.0 + 26711 NYQQTTISH 9 120 546.2585826835123 1090.5026124338244 2 546.2579223513603 MULTI CID FTMS 0 0 0 6226 132520.109375 0.8514606357598554 -1 0.0418376922607421 3 Unmodified _NYQQTTISH_ ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL 96.28474662873226 0.0124266067997264 3 [YN]QQTT{I|L}SH 9 0 + 84.396 0.0 0.0 7.7392 7.7392 92.67 0.0 0.0 0.0 64.13602231080993 14.973024840566469 14.973024840566469 9.208187539523747 0 0.8494850021680094 2.0 1.110924374808178 1.0 + + [YN]QQTT{I|L}SH;[YN][AG]QTT{I|L}SH;[YN]QQTTVTH;[YN]Q[AG]TT{I|L}SH;[YN][AG]QTTVTH;[YN]Q[AG]TTVTH;[YN][AG][AG]TT{I|L}SH;{[QN]|[E{I|L}]|[KN]}{I|L}TTQQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[DP]T{I|L}SH;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}E[NP]T{I|L}SH 7.7392;6.8948;6.7801;6.4362;5.9357;5.4772;5.1373;4.7378;4.4536;4.3366 +;-;-;-;-;-;-;-;-;- + 810 + 1 2.338 88760.8 1.0 1276 4951 6226 HBL1_DMSO_200M_050219_1,6229 HBL1_DMSO_200M_050219_1,6229,NYQQTTISH True True NYQQTTISH 32.066562 546.25792235136 737001.8125 6226.0 nc|ENSG00000164190|Q6KC79-3|NIPBL;;nc|ENSG00000164190|Q6KC79-2|NIPBL;;ENSG00000164190|ENST00000282516|NIPBL;;ENST00000504430.5_1_5:36961623-36995905:+|nuORF 7.937648773193359 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6230 32.08 800.0 60485.0 25 0 8400.5 -1 0 43 1049.7713530604103 3146.292229781432 3 1050.104785144329 MULTI CID FTMS 0 0 0 6226 121136.234375 0.9903237152549422 -1 0.0418376922607421 4 3 T 1 -1 6.9897 0.0 0.0 0.22216 0.0 0.0 2054.81305605272 987.4132784479124 3042.226334500632 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.22216 - 7 + 1 2.338 48387.8 0.4399999976158142 1277 4951 6226 HBL1_DMSO_200M_050219_1,6230 HBL1_DMSO_200M_050219_1,6230, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6232 32.092 532.0 199110.0 25 0 16109.0 + -1 LMVNNGKID 9 135 510.26125363982976 1018.5079543464597 2 510.2613403201103 MULTI CID FTMS 0 0 0 6231 178032.0 0.8450811905700492 12 -0.5272483825683594 1 Oxidation (M) _LM(Oxidation (M))VNNGKID_ REV__ENSG00000176601|ENST00000392915|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-3|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-4|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-5|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-7|MAP3K19 26.88365393820708 0.1891292719743517 3 YPVH[Y{I|L}]VE 8 -1 + 46.482 0.0 0.0 4.5637 4.5637 75.536 0.0 0.0 0.0 22.30072643713818 0.7403567746971973 0.7403567746971973 3.001252260310104 0 0.3252574989159953 1.3979400086720375 1.0356668758921828 0.0 YPVH[Y{I|L}]VE;YPVH[Y{I|L}]EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Y{I|L}][KC]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[H{I|L}][KC]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4.5637;4.2691;0.94371;0.62569 -;-;-;- 372 + 1 2.338 86640.4 1.0 1278 4952 6231 HBL1_DMSO_200M_050219_1,6232 HBL1_DMSO_200M_050219_1,6232,LMVNNGKID False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6233 32.093 48.0 1665500.0 25 0 135920.0 + 28103 PPLPQMPHVPP 11 81 403.8879066811003 1208.6418906435008 3 403.8875915408134 MULTI CID FTMS 0 0 0 6231 1040480.5625 0.1450444592922437 -3 0.1361198425292968 2 Unmodified _PPLPQMPHVPP_ REV__ENSG00000125363|ENST00000380714|AMELX;REV__nc|ENSG00000125363|Q99217-2|AMELX;REV__nc|ENSG00000125363|Q99217-3|AMELX 9.38312468134398 0.8308777417566128 3 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 -1 35.418 0.0 0.0 2.9304 0.0 0.0 0.0 394.22060608366047 394.22060608366047 19.61957069719769 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 2.9304 - 169 + 1 2.338 69702.3 1.0 1279 4952 6231 HBL1_DMSO_200M_050219_1,6233 HBL1_DMSO_200M_050219_1,6233,PPLPQMPHVPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6234 32.096 106.0 594360.0 25 0 104920.0 + -1 RFQSSAVM 8 72 471.2289056384009 940.4432583436018 2 471.2293273806572 MULTI CID FTMS 0 0 0 6231 557833.375 0.2102674228252024 -3 0.1361198425292968 3 Oxidation (M) _RFQSSAVM(Oxidation (M))_ ENSG00000275379|ENST00000616365|H3C11;ENSG00000277775|ENST00000618052|H3C7;ENSG00000197409|ENST00000356476|H3C4;ENSG00000197153|ENST00000359303|H3C12;ENSG00000278828|ENST00000685041|H3C10;ENSG00000203811|ENST00000369158|H3C14;ENSG00000275714|ENST00000613854|H3C1;ENSG00000168148|ENST00000366696|H3-4;nc|ENSG00000273213|Q5TEC6|H3-7;ENSG00000203852|ENST00000403683|H3C15;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENSG00000183598|ENST00000331491|H3C13 20.453626601364224 0.6087503291685402 3 AV{M(Oxidation (M))|F} 3 -1 31.682 0.0 0.0 3.3689 0.0 0.0 605.29203993965 0.0 605.29203993965 0.0 16.989700043360187 0.0 0.0 0 1.0 0.0 0.0 0.0 AV{M(Oxidation (M))|F} 3.3689 + + 44 1 2.338 53862.3 1.0 1280 4952 6231 HBL1_DMSO_200M_050219_1,6234 HBL1_DMSO_200M_050219_1,6234,RFQSSAVM False False RFQSSAVM 32.095569 471.229327380657 28555568.0 6231.0 ENSG00000275379|ENST00000616365|H3C11;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000168148|ENST00000366696|H3-4;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13 3.7938619454701743 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6235 32.105 551.0 225940.0 25 0 16444.0 + -1 EKLHTTKMK 9 148 566.3139557401656 1130.6133585471312 2 566.3134643435478 MULTI CID FTMS 0 0 0 6231 167548.40625 1.0 0 0.0 4 Oxidation (M) _EKLHTTKM(Oxidation (M))K_ REV__ENST00000530363.5_1_16:81161532-81175087:-|nuORF;REV__ENST00000533478.5_1_16:81157348-81174942:-|nuORF;REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2;REV__nc|ENSG00000166473|Q7Z442|PKD1L2 13.90604991867851 0.4602628045680013 3 [DV]RR[{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 44.076 0.0 0.0 3.8984 3.8984 82.856 0.0 0.0 0.0 1.028318269781181 24.39528698534282 1.028318269781181 13.494850021680094 0 0.9247425010840048 2.0 0.4247425010840047 0.0 [DV]RR[{I|L}P]T{M(Oxidation (M))|F}K;[DV]RR[{I|L}P]TT{[CA]|SS};{[CA]|SS}[RV]P[{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[KG]W[WP]K;[DV]RR[RH]G[HV] 3.8984;2.7048;2.1469;0.86133;0.35811 -;-;-;-;- 440 1 2.338 97059.5 1.0 1281 4952 6231 HBL1_DMSO_200M_050219_1,6235 HBL1_DMSO_200M_050219_1,6235,EKLHTTKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6236 32.111 319.0 247810.0 25 0 30047.0 + -1 MESRSCFDV 9 120 377.49140575867625 0 377.4914123415947 PEAK CID FTMS 0 0 0 6231 147403.0 0.3458367906166112 -2 0.0843219757080078 5 Carbamidomethyl (C) _MESRSC(Carbamidomethyl (C))FDV_ REV__ENST00000511638.5_1_5:137515050-137515239:+|nuORF 5.296884461304476 0.3444685223463735 3 VK 2 -1 7.9588 0.0 0.0 1.057 0.0 0.0 148.6435038007525 374.16437708072505 522.8078808814776 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VK 1.057 - 37 + 1 2.338 72304.5 1.0 1282 4952 6231 HBL1_DMSO_200M_050219_1,6236 HBL1_DMSO_200M_050219_1,6236,MESRSCFDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6237 32.125 800.0 92641.0 25 0 20583.0 + -1 HCEEEIWDEQM 11 58 761.2825562864608 0 761.2826415896416 PEAK CID FTMS 0 0 0 6231 137039.171875 0.6204775320882241 2 -0.1233596801757812 6 Carbamidomethyl (C),Oxidation (M) _HC(Carbamidomethyl (C))EEEIWDEQM(Oxidation (M))_ REV__ENSG00000101298|ENST00000381867|SNPH;REV__nc|ENSG00000101298|O15079|SNPH 0.3070304955306653 0.4761840153648598 3 A 1 -1 6.9897 0.0 0.0 0.45968 0.0 0.0 892.3184562235091 554.1732021993167 1446.4916584228258 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.45968 - 8 + 1 2.338 62980.4 0.5899999737739563 1283 4952 6231 HBL1_DMSO_200M_050219_1,6237 HBL1_DMSO_200M_050219_1,6237,HCEEEIWDEQM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6238 32.139 800.0 151410.0 25 0 44596.0 -1 GGCTCMPG 8 70 741.2370965924645 740.2298201258644 1 741.2373535037041 MULTI CID FTMS 0 0 0 6231 134548.703125 0.4274060384589727 -5 0.227914810180664 7 Oxidation (M) _GGCTCM(Oxidation (M))PG_ ENST00000553932.5_1_14:39307973-39308237:-|nuORF 5.230669730166228 0.792582437072536 3 GGG[PG] 5 -1 22.218 0.0 0.0 3.0016 0.0 0.0 397.0811281499244 0.0 397.0811281499244 0.0 3.7320406081154553 0.0 0.0 0 0.0 0.0 0.0 0.0 GGG[PG] 3.0016 - 41 1 2.338 91269.6 0.5699999928474426 1284 4952 6231 HBL1_DMSO_200M_050219_1,6238 HBL1_DMSO_200M_050219_1,6238,GGCTCMPG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6239 32.153 800.0 240560.0 25 0 19736.0 + + 12915 GYGGGYGGQSSM 12 163 568.7192329934203 1135.4239130536405 2 568.7197143435478 MULTI CID FTMS 0 0 0 6231 124411.6640625 0.1689491527193137 -3 0.1361198425292968 8 Unmodified _GYNGGGYNDYG_ ENST00000515481.5_1_5:179043097-179043181:-|nuORF;ENSG00000126945|ENST00000316594|HNRNPH2;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 24.881564428377168 0.5079759154518888 3 [YG]NGYNQSS{M(Oxidation (M))|F} 10 -1 + 77.283 0.0 0.0 6.8065 6.8065 89.785 0.0 0.0 0.0 41.3433197461917 16.532125137753432 16.532125137753432 9.164539485499262 0 1.6056270500406935 1.6989700043360187 1.4674165578762486 0.0 [YG]NGYNQSS{M(Oxidation (M))|F};[YG]GGGYNQSS{M(Oxidation (M))|F};[YG]NGYN[AG]SS{M(Oxidation (M))|F};[YG]NGYGGQSS{M(Oxidation (M))|F};[YG]NG[CS]SQSS{M(Oxidation (M))|F};[YG]NGYGG[AG]SS{M(Oxidation (M))|F};[YG]GGGYGGQSS{M(Oxidation (M))|F};[YG]GGGYN[AG]SS{M(Oxidation (M))|F};[YG]NG[CS]S[AG]SS{M(Oxidation (M))|F};[YG]GGG[CS]SQSS{M(Oxidation (M))|F} 6.8065;5.9994;5.9994;5.9994;5.937;5.1954;5.1954;5.1954;5.133;5.133 -;-;-;-;-;-;-;-;-;- 7390 + 1 2.338 143608.7 0.5799999833106995 1285 4952 6231 HBL1_DMSO_200M_050219_1,6239 HBL1_DMSO_200M_050219_1,6239,GYNGGGYNDYG False False GYGGGYGGQSSM 32.152553 568.719714343548 7678472.5 6231.0 ENST00000515481.5_1_5:179043097-179043181:-|nuORF;;ENSG00000126945|ENST00000316594|HNRNPH2;;ENSG00000169045|ENST00000393432|HNRNPH1;;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 7.757257143656413 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6240 32.167 751.0 153280.0 25 0 15596.0 41645 VPPRAPGV 8 135 396.739994305258 791.465435677316 2 396.7395202517509 MULTI CID FTMS 0 0 0 6231 101106.5234375 1.0 0 0.0 9 Unmodified _VPPRAPGV_ ENSG00000103657|ENST00000443617|HERC1 5.760428011301431 0.7893668129297577 3 VG 2 6 20.49 0.0 0.0 2.5888 0.0 0.0 617.3628407209 0.0 617.3628407209 0.0 9.652179074656244 0.0 0.0 0 0.4916440611282626 0.0 0.0 0.0 VG 2.5888 - 79 1 2.338 93328.3 1.0 1286 4952 6231 HBL1_DMSO_200M_050219_1,6240 HBL1_DMSO_200M_050219_1,6240,VPPRAPGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6242 32.172 50.0 763880.0 25 0 112350.0 + 11153 GEKPDTHLGGG 11 60 534.2590934377832 1066.5036339423664 2 534.2587768435478 MULTI CID FTMS 0 0 0 6241 1149078.75 0.1279979715549852 13 -0.5198860168457031 1 Unmodified _GEKPDTHLGGG_ REV__ENSG00000131269|ENST00000373394|ABCB7;REV__nc|ENSG00000131269|O75027-2|ABCB7;REV__nc|ENSG00000131269|O75027-3|ABCB7 16.149105407346934 0.6992268271266642 3 SSHV{[QG]|[NA]} 6 -1 36.688 0.0 0.0 3.44 0.0 0.0 453.22313124824376 0.0 453.22313124824376 0.0 23.30056450329683 0.0 0.0 0 0.5 0.0 1.2302046884880935 0.0 SSHV{[QG]|[NA]} 3.44 - 102 1 2.339 37023.2 1.0 1287 4953 6241 HBL1_DMSO_200M_050219_1,6242 HBL1_DMSO_200M_050219_1,6242,GEKPDTHLGGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6243 32.174 76.0 1106000.0 25 0 178030.0 + -1 IQRLETMK 8 84 517.7865055958047 1033.5584582584092 2 517.7869750857353 MULTI CID FTMS 0 0 0 6241 970190.3125 0.0039846372362687 107 -3.7717018127441406 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 KTT[{I|L}P][WP]K 8 -1 49.179 0.0 0.0 4.7582 0.0 0.0 63.99760807038337 0.0 63.99760807038337 0.0 21.352495851794146 0.0 0.0 0 1.6421590589602533 0.0 1.3494850021680094 0.2887254899964357 KTT[{I|L}P][WP]K 4.7582 - 454 + 1 2.339 74226.4 1.0 1288 4953 6241 HBL1_DMSO_200M_050219_1,6243 HBL1_DMSO_200M_050219_1,6243,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6244 32.177 147.0 512390.0 25 0 43548.0 + 13610 HPPPPPRLG 9 69 484.2771437612616 966.5397345893232 2 484.2772704958916 MULTI CID FTMS 0 0 0 6241 530745.5 0.7025120146539359 2 -0.0837669372558593 3 Unmodified _HPPPPPRLG_ REV__ENSG00000156860|ENST00000356166|FBRS 21.74664581756881 0.2544899275067181 3 HPPP 4 -1 52.083 0.0 0.0 5.3886 0.0 0.0 0.0 535.2999361627561 535.2999361627561 38.2666785586749 0.0 0.0 0.0 0 0.7134679910804405 1.3010299956639813 0.0 0.0 HPPP 5.3886 + + 51 + 1 2.339 67369.9 1.0 1289 4953 6241 HBL1_DMSO_200M_050219_1,6244 HBL1_DMSO_200M_050219_1,6244,HPPPPPRLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6245 32.179 127.0 421780.0 25 0 84984.0 + -1 SATSCGTTRSC 11 85 565.7337700490006 1129.452987164801 2 565.7338134646416 MULTI CID FTMS 0 0 0 6241 493208.90625 0.9150683331914774 -1 0.0865745544433593 4 Carbamidomethyl (C) _SATSCGTTRSC(Carbamidomethyl (C))_ REV__nc|ENSG00000136487|P01242-4|GH2 8.745405648335112 0.8338865417133445 3 [DV]YK 4 -1 44.297 0.0 0.0 3.922 0.0 0.0 0.0 621.1734713190061 621.1734713190061 22.148415687162952 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.9247425010840048 [DV]YK 3.922 - 156 + 1 2.339 47118.7 1.0 1290 4953 6241 HBL1_DMSO_200M_050219_1,6245 HBL1_DMSO_200M_050219_1,6245,SATSCGTTRSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6246 32.182 117.0 395080.0 25 0 37889.0 + -1 TPMGPGRTV 9 73 466.23693866241285 0 466.2367431521416 PEAK CID FTMS 0 0 0 6241 369576.65625 0.6679724936458628 1 -0.0367851257324218 5 Oxidation (M) _TPM(Oxidation (M))GPGRTV_ ENSG00000116977|ENST00000366584|LGALS8;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;nc|ENSG00000116977|O00214-2|LGALS8 24.99096001346401 0.1558265925128033 3 P{M(Oxidation (M))|F}GP 4 -1 17.652 0.0 0.0 1.8971 0.0 0.0 101.04772806872536 428.22654138736567 529.274269456091 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 P{M(Oxidation (M))|F}GP 1.8971 + + 45 + 1 2.339 42892.2 1.0 1291 4953 6241 HBL1_DMSO_200M_050219_1,6246 HBL1_DMSO_200M_050219_1,6246,TPMGPGRTV False False TPMGPGRTV 32.181685 466.236743152142 9747742.0 6241.0 ENSG00000116977|ENST00000366584|LGALS8;;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;;nc|ENSG00000116977|O00214-2|LGALS8 8.27623987197876 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6247 32.187 315.0 346880.0 25 0 33101.0 + -1 TIHIFRIMY 9 72 605.3283487601788 1208.6421445871574 2 605.3273193240166 MULTI CID FTMS 0 0 0 6241 282081.46875 0.5706766767557828 -2 0.129058837890625 6 Oxidation (M) _TIHIFRIM(Oxidation (M))Y_ REV__ENST00000316660.6_1_18:57570359-57570470:+|nuORF 15.847184025352805 0.4077185912009129 3 HEPPH[VP] 7 -1 40.634 0.0 0.0 3.362 0.0 0.0 397.24351699043126 0.0 397.24351699043126 0.0 32.67561010590676 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 HEPPH[VP] 3.362 - 207 1 2.339 83790.2 1.0 1292 4953 6241 HBL1_DMSO_200M_050219_1,6247 HBL1_DMSO_200M_050219_1,6247,TIHIFRIMY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6248 32.191 213.0 447160.0 25 0 42355.0 19568 LFSLCLAEK 9 107 341.85743004396534 1022.550460732096 3 341.8572265505791 MULTI CID FTMS 0 0 0 6241 267291.375 0.8519813868094013 -1 0.0865745544433593 7 Unmodified _LFSLCLAEK_ ENST00000477988.1_1_2:183790415-183790502:-|nuORF 18.1463463914782 0.3454829746528889 3 DAAEK 5 6 44.266 0.0 0.0 4.329 0.0 0.0 490.3015726479149 0.0 490.3015726479149 0.0 34.5597718523608 0.0 0.0 0 1.8807196863200843 0.0 0.4247425010840047 0.3252574989159953 DAAEK 4.329 - 76 + 1 2.339 80126.1 1.0 1293 4953 6241 HBL1_DMSO_200M_050219_1,6248 HBL1_DMSO_200M_050219_1,6248,LFSLCLAEK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6249 32.195 182.0 441840.0 25 0 36442.0 44371 YLSPEILQA 9 93 345.1908757322003 1032.550797796801 3 345.5253173708916 MULTI CID FTMS 0 0 0 6241 235594.4375 0.1852072349660019 13 -0.5198860168457031 8 Unmodified _YLSPEILQA_ ENSG00000104936|ENST00000291270|DMPK;ENST00000596686.5_1_19:46273741-46282867:-|nuORF;nc|ENSG00000104936|Q09013-1|DMPK;nc|ENSG00000104936|Q09013-10|DMPK;nc|ENSG00000104936|Q09013-11|DMPK;nc|ENSG00000104936|Q09013-12|DMPK;nc|ENSG00000104936|Q09013-15|DMPK;nc|ENSG00000104936|Q09013-16|DMPK;nc|ENSG00000104936|Q09013-2|DMPK;nc|ENSG00000104936|Q09013-6|DMPK;nc|ENSG00000104936|Q09013-7|DMPK;nc|ENSG00000104936|Q09013-8|DMPK 9.5439744041441 0.5815088571869578 3 Y[HK]P{I|L}T{M(Oxidation (M))|F}K 8 6 + 32.929 0.0 0.0 3.1891 3.1891 69.371 0.0 0.0 0.0 18.944794765625304 7.804716679859212 7.804716679859212 1.2506126339169974 0 0.0 0.0 0.3252574989159953 0.555462187404089 Y[HK]P{I|L}T{M(Oxidation (M))|F}K;Y{I|L}{[ES]|[DT]|[{I|L}C]}P{I|L}[PS]K;YP[HK]{I|L}T{M(Oxidation (M))|F}K;Y{I|L}{[ES]|[DT]|[{I|L}C]}P{I|L}[QA]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[{I|L}V][MT]{[QN]|[E{I|L}]|[KN]};[KT]T{I|L}P[MT]{[QN]|[E{I|L}]|[KN]} 3.1891;3.068;2.727;2.2686;0.30087;0.19704 -;-;-;-;-;- 177 + 1 2.339 71842.0 1.0 1294 4953 6241 HBL1_DMSO_200M_050219_1,6249 HBL1_DMSO_200M_050219_1,6249,YLSPEILQA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6250 32.2 265.0 295690.0 25 0 33090.0 + 113 AAKDPSPSV 9 99 436.2296323815122 870.4447118298244 2 436.2288085818291 MULTI CID FTMS 0 0 0 6241 199097.53125 0.1034262211188858 -5 0.2784347534179687 9 Unmodified _AAKDPSPSV_ ENSG00000132361|ENST00000651024|CLUH;nc|ENSG00000132361|O75153|CLUH 57.72198328787511 0.0273433238377839 3 AATAAPSPSV 10 3 + 53.73 0.0 0.0 6.1728 6.1728 77.056 0.0 0.0 0.0 5.648350154927833 5.648350154927833 5.648350154927833 0.5115252244738073 0 1.992992819099939 1.3979400086720375 0.7302046884880937 0.0 AATAAPSPSV;AATAASPPSV;AA{[QD]|[EN]|[WG]|[KD]|[RS]}PSPSV;[VG]SAAPSPSV;[VG]SAASPPSV;[PS]VSGAAPSV;[PS]DKAAPSV;[VG][QT]PSPSV;[VG][QT]SPPSV;[PS]V[QA]SPSV 6.1728;6.114;5.5239;5.4548;5.396;5.2515;5.1402;5.0886;5.0298;4.9365 -;-;+;-;-;-;-;-;-;- + 500 1 2.339 69678.5 1.0 1295 4953 6241 HBL1_DMSO_200M_050219_1,6250 HBL1_DMSO_200M_050219_1,6250,AAKDPSPSV True True AAKDPSPSV 32.199857 436.228808581829 24374802.0 6241.0 ENSG00000132361|ENST00000651024|CLUH;;nc|ENSG00000132361|O75153|CLUH 7.212501366933186 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6251 32.204 209.0 347120.0 25 0 33236.0 + 25252 MVPETTHEA 9 101 507.7318138779387 1013.4490748226774 2 507.7320129275322 MULTI CID FTMS 0 0 0 6241 188693.21875 0.2229078290402665 -6 0.3144893646240234 10 Unmodified _MVPETTHEA_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 36.12702656103203 0.0967173616627612 3 {[ET]|[MV]}PETTH{[CP]|[EA]} 9 0 + 41.849 0.0 0.0 4.1294 4.1294 83.825 0.0 0.0 0.0 21.79490561398657 4.304257436765674 4.304257436765674 15.22931222813204 0 0.4247425010840047 0.0 1.0189301784845295 0.0 + + {[ET]|[MV]}PETTH{[CP]|[EA]};{[ET]|[MV]}PE[HS]E[VS];{[ET]|[MV]}PET[HD][VS];{[ET]|[MV]}PEE[HS][VS];[{M(Oxidation (M))|F}T]AHTTH{[CP]|[EA]};[EP]{[ET]|[MV]}THAET;{[ET]|[MV]}PETHAET;{[YC]|[HE]}W{I|L}EAET;[VS]{[YC]|[HE]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[DP];[{M(Oxidation (M))|F}T]P[DP]TH{[CP]|[EA]} 4.1294;2.6267;2.6041;2.4078;2.222;2.1364;2.127;1.3132;1.2151;1.0879 +;-;-;-;-;-;-;-;-;- + 331 + 1 2.339 63735.4 1.0 1296 4953 6241 HBL1_DMSO_200M_050219_1,6251 HBL1_DMSO_200M_050219_1,6251,MVPETTHEA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6253 32.21 180.0 388680.0 25 0 64308.0 + 39307 VAEDRTRVV 9 83 348.864862829186 1043.572759087758 3 348.8644897341728 MULTI CID FTMS 0 0 0 6252 373543.09375 0.2873843082227725 3 -0.1880989074707031 1 Unmodified _VAEDRTRVV_ ENSG00000143641|ENST00000366672|GALNT2;nc|ENSG00000143641|Q10471-2|GALNT2 15.248480904072842 0.4239247793462406 3 VAEDR 5 4 61.411 0.0 0.0 5.8847 0.0 0.0 0.0 470.2722262018188 470.2722262018188 50.81513480827785 0.0 0.0 0.0 0 0.2215141619232908 2.0 0.0 0.4247425010840047 + VAEDR 5.8847 + + 33 + 1 2.339 70963.1 1.0 1297 4954 6252 HBL1_DMSO_200M_050219_1,6253 HBL1_DMSO_200M_050219_1,6253,VAEDRTRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6254 32.22 572.0 162790.0 25 0 35871.0 + 38823 TVGNNKTL 8 128 423.7376939105076 845.4608348878152 2 423.7369872927666 MULTI CID FTMS 0 0 0 6252 184487.578125 1.0 0 0.0 2 Unmodified _TVGNNKTL_ CON__P35527;ENSG00000171403|ENST00000246662|KRT9 25.399314129420983 0.5099049743284904 3 {[TV]|[{I|L}S]}WQ{I|L}S{I|L} 7 5 + 42.809 0.0 0.0 5.0633 5.0633 82.772 0.0 0.0 0.0 7.771591808308656 5.941672674783476 5.941672674783476 7.771591808308656 0 0.6549471895720985 2.0 0.5044321917401079 0.0 {[TV]|[{I|L}S]}WQ{I|L}S{I|L};{[TV]|[{I|L}S]}[NG]NKT{I|L};{[TV]|[{I|L}S]}W[AG]{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}[NG]T{I|L}S{I|L};{[TV]|[{I|L}S]}[NG]GGKT{I|L};[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}S{I|L};[NG]NKT{I|L}S{I|L};{[TV]|[{I|L}S]}[NG]N[{I|L}T]K;{[QN]|[E{I|L}]|[KN]}T[NG]{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}[SG]Q{I|L}S{I|L} 5.0633;4.1441;3.9597;3.5552;3.0486;2.7869;2.5247;2.4123;2.2818;2.2277 -;+;-;-;-;-;-;-;-;- + 363 1 2.339 74186.5 1.0 1298 4954 6252 HBL1_DMSO_200M_050219_1,6254 HBL1_DMSO_200M_050219_1,6254,TVGNNKTL False True TVGNNKTL 32.219548 423.736987292767 888774.5 6252.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 0.494629330933094 2.0 True 8.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 6255 32.228 489.0 195350.0 25 0 11141.0 + 29876 QRISKMQECA 10 152 398.5308413775388 1192.5706947328165 3 398.8647643923759 MULTI CID FTMS 0 0 0 6252 142826.078125 1.0 0 0.0 3 Unmodified _QRISKMQECA_ REV__ENSG00000167615|ENST00000326764|LENG8;REV__nc|ENSG00000167615|Q96PV6-1|LENG8 6.723162845929126 0.6955379296933136 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}DK{I|L} 6 -1 31.56 0.0 0.0 2.6464 0.0 0.0 0.0 436.0976181930674 436.0976181930674 19.085390679490075 0.0 0.0 0.0 0 0.0 0.0 0.5 0.6549471895720985 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}DK{I|L} 2.6464 - 215 1 2.339 80678.8 1.0 1299 4954 6252 HBL1_DMSO_200M_050219_1,6255 HBL1_DMSO_200M_050219_1,6255,QRISKMQECA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6256 32.237 492.0 164310.0 25 0 13654.0 + 13975 HYVEKAAAV 9 118 494.26609607685583 986.5176392205116 2 494.2657958865166 MULTI CID FTMS 0 0 0 6252 120003.578125 1.0 0 0.0 4 Unmodified _HYVEKAAAV_ ENSG00000157827|ENST00000288670|FMNL2;nc|ENSG00000157827|Q96PY5|FMNL2 59.36838082759317 0.0264317782606298 3 {[WN]|[YH]}VEKAAAV 9 0 + 56.275 0.0 0.0 5.7044 5.7044 88.867 0.0 0.0 0.0 14.35316740696797 14.09256854528806 14.09256854528806 14.35316740696797 0 1.5233623702246373 1.6989700043360187 0.5 0.0 + + {[WN]|[YH]}VEKAAAV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VHPHAAV;AA[{I|L}T]HPHAAV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VHYAAAV;AA[{I|L}T]HYAAAV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAYHAAV;AA[{I|L}T]AYHAAV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AVYHAAV;{[QS]|[NT]}{I|L}VYHAAV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VHPAHAV 5.7044;4.2494;4.0606;3.9398;3.751;3.6979;3.5091;3.491;3.4379;3.4375 +;-;-;-;-;-;-;-;-;- + 961 1 2.339 63853.0 1.0 1300 4954 6252 HBL1_DMSO_200M_050219_1,6256 HBL1_DMSO_200M_050219_1,6256,HYVEKAAAV True True HYVEKAAAV 32.23686 494.265795886517 589101.4375 6252.0 nc|ENSG00000157827|Q96PY5|FMNL2;;ENSG00000157827|ENST00000288670|FMNL2 6.6741823355356855 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6257 32.251 800.0 107850.0 25 0 17611.0 -1 MPCACSCSW 9 102 587.6931513050658 1173.3717496769316 2 587.6935302615166 MULTI CID FTMS 0 0 0 6252 92463.609375 1.0 0 0.0 5 3 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))PC(Carbamidomethyl (C))AC(Carbamidomethyl (C))SC(Carbamidomethyl (C))SW_ ENST00000602726.1_1_19:49632066-49632159:+|nuORF 4.3292370932331545 0.7635526921153418 3 SD{M(Oxidation (M))|F} 3 -1 21.427 0.0 0.0 1.8261 0.0 0.0 806.2644856570779 0.0 806.2644856570779 0.0 1.9627248839266545 0.0 0.0 0 0.0 0.0 0.0 0.0 SD{M(Oxidation (M))|F} 1.8261 - 28 1 2.339 69584.4 0.5 1301 4954 6252 HBL1_DMSO_200M_050219_1,6257 HBL1_DMSO_200M_050219_1,6257,MPCACSCSW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6259 32.267 800.0 101530.0 25 0 17750.0 + 39309 VAEDRTRVV 9 106 522.7932356679771 1043.571918402754 2 522.7932006716728 MULTI CID FTMS 0 0 0 6258 29992.3203125 0.0729983259327543 3 -0.17987060546875 1 Unmodified _VAEDRTRVV_ ENSG00000143641|ENST00000366672|GALNT2;nc|ENSG00000143641|Q10471-2|GALNT2 13.90604991867851 0.4602628045680013 3 VAED 4 5 33.218 0.0 0.0 3.1831 0.0 0.0 0.0 626.3748730155328 626.3748730155328 22.621596682826432 0.0 0.0 0.0 0 0.3040241051818163 1.3979400086720375 0.0 0.0 + VAED 3.1831 + + 75 + 1 2.339 68123.9 0.5899999737739563 1302 4955 6258 HBL1_DMSO_200M_050219_1,6259 HBL1_DMSO_200M_050219_1,6259,VAEDRTRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6260 32.269 122.0 970440.0 25 0 173090.0 -1 0 91 365.1737826140623 364.1665061474623 1 365.1730529665947 MULTI CID FTMS 0 0 0 6258 439437.75 0.0996296629659792 -2 0.0837669372558593 2 3 SY 2 -1 16.867 0.0 0.0 4.6316 0.0 0.0 96.06044032890608 0.0 96.06044032890608 0.0 12.262561216922858 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 SY 4.6316 - 17 + 1 2.339 98789.9 1.0 1303 4955 6258 HBL1_DMSO_200M_050219_1,6260 HBL1_DMSO_200M_050219_1,6260, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6261 32.283 800.0 107060.0 25 0 5964.7 -1 0 97 753.3155095595229 2256.9246992787685 3 753.6503173708916 MULTI CID FTMS 0 0 0 6258 164360.5 1.0 0 0.0 3 3 [PS]TG[NS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SAPSTG[DV]QGSH{[YD]|[{M(Oxidation (M))|F}M]} 22 -1 [PS]TG[NS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SA + + 57.544 40.908 4.1097 2.5497 2.5497 49.44 0.0 0.0 0.0 0.0 16.63622641003171 0.0 0.0 0 0.805462187404089 0.0 0.3054621874040891 2.368415180652539 [PS]TG[NS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SAPSTG[DV]QGSH{[YD]|[{M(Oxidation (M))|F}M]} 2.5497 - 2205 + 1 2.339 71031.9 0.6200000047683716 1304 4955 6258 HBL1_DMSO_200M_050219_1,6261 HBL1_DMSO_200M_050219_1,6261, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6262 32.292 484.0 169100.0 25 0 35762.0 + 4086 DANHTGAVV 9 128 442.2176366979531 882.4207204627062 2 442.2169677615166 MULTI CID FTMS 0 0 0 6258 158970.109375 0.6071331025006044 -2 0.0837669372558593 4 Unmodified _DANHTGAVV_ ENSG00000132823|ENST00000255174|OSER1 39.94969957227396 0.0757326808254658 3 TQVV 4 6 41.983 0.0 0.0 4.7577 0.0 0.0 437.1659107892594 0.0 437.1659107892594 0.0 26.49797211252192 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.3807196863200844 TQVV 4.7577 - 206 1 2.339 69957.0 1.0 1305 4955 6258 HBL1_DMSO_200M_050219_1,6262 HBL1_DMSO_200M_050219_1,6262,DANHTGAVV True True DANHTGAVV 32.29176 442.216967761517 3418169.0 6258.0 ENSG00000132823|ENST00000255174|OSER1 5.654061158498128 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6263 32.3 469.0 352990.0 25 0 70359.0 + 36601 TAPEDTRRI 9 97 529.7830268647226 1057.5515007962451 2 529.7834350466728 MULTI CID FTMS 0 0 0 6258 150653.28125 0.1846628169015811 -2 0.0837669372558593 5 Unmodified _TAPEDTRRI_ ENSG00000140650|ENST00000268261|PMM2;ENST00000567697.1_1_16:8904837-8941679:+|nuORF 43.77239144664712 0.0547478964384323 3 TA{I|L} 3 6 47.435 0.0 0.0 4.4854 0.0 0.0 0.0 769.3603253671134 769.3603253671134 24.75895023531386 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 TA{I|L} 4.4854 - 80 + 1 2.339 130410.5 1.0 1306 4955 6258 HBL1_DMSO_200M_050219_1,6263 HBL1_DMSO_200M_050219_1,6263,TAPEDTRRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6264 32.314 800.0 205640.0 25 0 35476.0 + 38041 TPDPPLAPSR 10 138 525.784207690867 1049.553862448534 2 525.7844116091728 MULTI CID FTMS 0 0 0 6258 134381.15625 0.7456656269442774 -1 0.0469818115234375 6 Unmodified _TPDPPLAPSR_ REV__ENSG00000187902|ENST00000376325|SHISA7;REV__ENST00000416792.1_3_19:55944525-55949973:-|nuORF 26.268140514670165 0.3785003716575977 3 [VG][TA]T[{I|L}P]T 8 -1 35.652 0.0 0.0 3.3969 0.0 0.0 0.0 306.1130851169395 306.1130851169395 11.672809246458227 0.0 0.0 0.0 0 1.6861818737241734 2.0 0.9916440611282626 0.0 [VG][TA]T[{I|L}P]T 3.3969 - 421 + 1 2.339 130607.7 0.6100000143051147 1307 4955 6258 HBL1_DMSO_200M_050219_1,6264 HBL1_DMSO_200M_050219_1,6264,TPDPPLAPSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6265 32.325 646.0 299160.0 25 0 15986.0 27982 PLYFFRLK 8 215 361.8821116805974 1082.6245056419923 3 361.8812438845634 MULTI CID FTMS 0 0 0 6258 112918.9921875 0.9003520769236999 1 -0.0896186828613281 7 Unmodified _PLYFFRLK_ ENST00000353275.9_2_4:1980855-1981176:+|nuORF 8.593279151180031 0.7721714526254883 3 [{I|L}P]{[WT]|[RM]}GA{I|L}DP 9 6 32.659 0.0 0.0 3.0166 0.0 0.0 0.0 129.10925924012034 129.10925924012034 -1.330765140247138 0.0 -1.330765140247138 0.0 0 0.0 1.6989700043360187 0.6549471895720985 0.0 [{I|L}P]{[WT]|[RM]}GA{I|L}DP 3.0166 - 1915 1 2.339 159335.8 1.0 1308 4955 6258 HBL1_DMSO_200M_050219_1,6265 HBL1_DMSO_200M_050219_1,6265,PLYFFRLK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6266 32.34 800.0 125810.0 25 0 4759.3 + 8805 EWWLHYYSEDY 11 144 795.8305301643763 1589.6465073955526 2 795.8304321169853 MULTI CID FTMS 0 0 0 6258 110980.109375 0.7303495715110971 -1 0.0469818115234375 8 Unmodified _EWWLHYYSEDY_ REV__ENST00000547733.1_1_12:39687284-39687350:-|nuORF 13.042465956692816 0.7638483625850725 3 [SG]GGGN[RN]SGYGSGGGSY 18 -1 + 142.94 0.0 0.0 8.9919 8.9919 85.121 0.0 0.0 0.0 9.738276583032928 15.23631422778996 9.738276583032928 1.696091315277613 0 3.927825934852436 0.8239087409443188 3.953763294237026 0.0 [SG]GGGN[RN]SGYGSGGGSY;[SG]GGGNQAASGYGSGGGSY;[SG]NGN[RN]SGYGSGGGSY;[SG]GGGNGPYPYGSGGGSY;[SG]GGGN[RN]YGSGSGGGSY;[SG]GGGN[RN]YSGGSGGGSY;[SG]GGGN[RN]SYGGSGGGSY;[SG]NGNQAASGYGSGGGSY;[SG]GGGNQG[TA]GYGSGGGSY;[SG]GGGNQAAYSGGSGGGSY 8.9919;8.8852;8.7035;8.6524;8.638;8.638;8.638;8.5959;8.585;8.5313 -;-;-;-;-;-;-;-;-;- 616305 1 2.339 74864.4 0.5400000214576721 1309 4955 6258 HBL1_DMSO_200M_050219_1,6266 HBL1_DMSO_200M_050219_1,6266,EWWLHYYSEDY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6268 32.346 67.0 820360.0 25 0 55064.0 + 4926 DGLRQRVE 8 100 324.84563080856674 971.5150630259002 3 324.8453857302666 MULTI CID FTMS 0 0 0 6267 529809.125 0.1184137932036391 3 -0.0964813232421875 1 Unmodified _DGLRQRVE_ ENSG00000115255|ENST00000233596|REEP6;ENST00000591735.2_1_19:1491211-1495711:+|nuORF;nc|ENSG00000115255|Q96HR9|REEP6 16.149105407346934 0.6723412507259107 3 DG{I|L}R{M(Oxidation (M))|F}C 6 4 50.267 0.0 0.0 5.1741 0.0 0.0 0.0 277.1712740533813 277.1712740533813 40.08570461856127 0.0 0.0 0.0 0 0.2215141619232908 1.154901959985743 0.0 0.3807196863200844 DG{I|L}R{M(Oxidation (M))|F}C 5.1741 - 110 + 1 2.341 49940.4 1.0 1310 4956 6267 HBL1_DMSO_200M_050219_1,6268 HBL1_DMSO_200M_050219_1,6268,DGLRQRVE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6269 32.348 126.0 344620.0 25 0 55140.0 4841 DFLKGFFV 8 52 486.7647948882757 971.5150368433514 2 486.7646362185478 MULTI CID FTMS 0 0 0 6267 292755.90625 0.1465233867440551 3 -0.0964813232421875 2 Unmodified _DFLKGFFV_ L1PA6_dup546|chr2:49227587-49231532:-|1.156546377819926|0.2927699401366612|1.98|48.0|151|1|anti-sense 5.760428011301431 0.7893668129297577 3 DV 2 6 20.969 0.0 0.0 2.1584 0.0 0.0 0.0 754.3971797354818 754.3971797354818 17.47425010840047 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV 2.1584 - 4 + 1 2.341 38976.6 1.0 1311 4956 6267 HBL1_DMSO_200M_050219_1,6269 HBL1_DMSO_200M_050219_1,6269,DFLKGFFV False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 6270 32.35 75.0 1060700.0 25 0 236910.0 + 45873 YYRDARSY 8 62 547.2566266255915 1092.4987003179829 2 547.2570068240166 MULTI CID FTMS 0 0 0 6267 723351.4375 0.6234703227832656 -1 0.0896186828613281 3 Unmodified _YYRDARSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 29.081581746732265 0.4323690340403521 3 Y[YR]D{[QV]|[N{I|L}]|[RA]|[KV]}SY 8 0 + 39.117 0.0 0.0 3.5805 3.5805 73.817 0.0 0.0 0.0 15.929862658764264 3.3994806169435066 3.3994806169435066 3.3994806169435066 0 0.8494850021680094 0.0 0.0 0.4247425010840047 + + Y[YR]D{[QV]|[N{I|L}]|[RA]|[KV]}SY;Y[YR]DY[WK];Y[YR]D[WK]Y;[TP]{[{M(Oxidation (M))|F}H]|[RQ]}D{[QV]|[N{I|L}]|[RA]|[KV]}SY;[TP]{[{M(Oxidation (M))|F}H]|[RQ]}DY[WK];[TP]{[{M(Oxidation (M))|F}H]|[RQ]}D[WK]Y 3.5805;3.2694;3.2694;1.9072;1.5898;1.5898 +;-;-;-;-;- + 79 + 1 2.341 67605.9 1.0 1312 4956 6267 HBL1_DMSO_200M_050219_1,6270 HBL1_DMSO_200M_050219_1,6270,YYRDARSY False True YYRDARSY 32.349914 547.257006824017 47766265.0 6267.0 ENSG00000159377|ENST00000290541|PSMB4;;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 7.721487522125244 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6271 32.364 800.0 224570.0 25 0 42479.0 -1 0 58 1093.3817818703774 3277.123516211333 3 1094.049609363079 MULTI CID FTMS 0 0 0 6267 262548.1875 0.6266389007190853 -1 0.0896186828613281 4 3 G{M(Oxidation (M))|F}[YG]ET 6 -1 15.495 0.0 0.0 0.47281 0.0 0.0 1943.680038799232 676.1594332330686 2619.8394720323 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 G{M(Oxidation (M))|F}[YG]ET 0.47281 - 122 + 1 2.341 146725.4 0.7099999785423279 1313 4956 6267 HBL1_DMSO_200M_050219_1,6271 HBL1_DMSO_200M_050219_1,6271, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6272 32.37 340.0 355900.0 25 0 19922.0 + 24722 MPDDHARKI 9 149 361.5188285290977 1081.5346561874933 3 361.8524658083916 MULTI CID FTMS 0 0 0 6267 143735.484375 0.9225133848147788 -1 0.0896186828613281 5 Unmodified _MPDDHARKI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 27.628801355627647 0.1796483985696185 3 MPDDHA 6 3 46.252 0.0 0.0 4.2765 0.0 0.0 0.0 412.2688997858032 412.2688997858032 22.450057367201925 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 + MPDDHA 4.2765 + + 1219 + 1 2.341 107116.9 1.0 1314 4956 6267 HBL1_DMSO_200M_050219_1,6272 HBL1_DMSO_200M_050219_1,6272,MPDDHARKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6273 32.378 463.0 239150.0 25 0 26933.0 + 43752 YEDIAQKS 8 143 477.2321330740448 952.4497132148896 2 477.2313720583916 MULTI CID FTMS 0 0 0 6267 123498.2734375 0.6820867399672776 -1 0.0896186828613281 6 Unmodified _YEDIAQKS_ ENSG00000167768|ENST00000252244|KRT1 34.93206674587334 0.3190774572298582 3 YED{I|L}AQSK 8 2 + 74.167 0.0 0.0 7.787 7.787 81.366 0.0 0.0 0.0 36.40978057358332 0.4307281554459337 0.4307281554459337 0.4307281554459337 0 0.9247425010840048 2.0 0.4247425010840047 0.75 YED{I|L}AQSK;YED{I|L}AQKS;YED{I|L}A[AG]SK;YED{I|L}A[AG]KS;YE[{I|L}A]DQSK;YE[{I|L}A]DQKS;YE[W{I|L}]QSK;YE[W{I|L}]QKS;YEDK[PS]SK;YEDK[PS]KS 7.787;7.7418;6.8145;6.7693;6.4323;6.387;6.3247;6.2794;5.918;5.8728 -;+;-;-;-;-;-;-;-;- + 657 + 1 2.341 89823.2 1.0 1315 4956 6267 HBL1_DMSO_200M_050219_1,6273 HBL1_DMSO_200M_050219_1,6273,YEDIAQKS False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6274 32.392 800.0 103630.0 25 0 6767.1 + 24611 MLLLNPNTSF 10 95 575.3022110259274 0 575.3025390505791 PEAK CID FTMS 0 0 0 6267 115261.8046875 1.0 0 0.0 7 Unmodified _MLLLNPNTSF_ REV__ENSG00000173557|ENST00000329615|FAM166C;REV__ENST00000479453.1_1_2:26798863-26800497:+|nuORF 7.289230182591677 0.3953776778296116 3 Q{I|L} 2 -1 9.464 0.0 0.0 0.82396 0.0 0.0 663.3619466106453 241.06606470279533 904.4280113134406 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L} 0.82396 - 98 + 1 2.341 66617.5 0.5799999833106995 1316 4956 6267 HBL1_DMSO_200M_050219_1,6274 HBL1_DMSO_200M_050219_1,6274,MLLLNPNTSF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6276 32.396 11.0 5999400.0 25 0 545540.0 + 27314 PHPHGREALPV 11 66 403.8879066811003 1208.6418906435008 3 403.8878051638603 MULTI CID FTMS 0 0 0 6275 4640112.0 0.6468381633947645 2 -0.04498291015625 1 Unmodified _PHPHGREALPV_ ENST00000400451.6_1_22:20760237-20760540:+|nuORF 9.38312468134398 0.8308777417566128 3 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 9 36.923 0.0 0.0 3.055 0.0 0.0 0.0 394.2209486444884 394.2209486444884 19.13180601660436 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 3.055 - 137 + 1 2.341 54901.7 1.0 1317 4957 6275 HBL1_DMSO_200M_050219_1,6276 HBL1_DMSO_200M_050219_1,6276,PHPHGREALPV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6277 32.398 71.0 638010.0 25 0 114060.0 -1 RFQSSAVM 8 65 471.2289056384009 940.4432583436018 2 471.2292358279228 MULTI CID FTMS 0 0 0 6275 719752.5625 0.2713005767873075 2 -0.04498291015625 2 Oxidation (M) _RFQSSAVM(Oxidation (M))_ ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7 15.847184025352805 0.6768015514314958 3 AV{M(Oxidation (M))|F} 3 -1 31.682 0.0 0.0 3.3689 0.0 0.0 605.2960072248062 0.0 605.2960072248062 0.0 21.08650560932817 0.0 0.0 0 1.0 0.0 0.0 0.0 AV{M(Oxidation (M))|F} 3.3689 + + 23 1 2.341 41588.3 1.0 1318 4957 6275 HBL1_DMSO_200M_050219_1,6277 HBL1_DMSO_200M_050219_1,6277,RFQSSAVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6278 32.401 175.0 543140.0 25 0 48107.0 -1 0 137 332.17861755238783 662.3426821715757 2 332.1785461306572 MULTI CID FTMS 0 0 0 6275 349097.53125 0.4869006786548733 -4 0.224884033203125 3 3 [MN][KA]TV 6 -1 + 37.145 0.0 0.0 5.6081 5.6081 90.083 0.0 0.0 0.0 30.15539695625556 14.69273760456403 14.69273760456403 32.47483081353674 0 0.5484550065040281 1.2218487496163564 0.5796896906561032 0.0 [MN][KA]TV;[TA]VK[MN];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ANTV;[KA]MNTV;{[TV]|[{I|L}S]}AK[MN] 5.6081;0.70511;0.43196;0.43196;0.34488 -;-;-;-;- 110 + 1 2.341 77046.8 1.0 1319 4957 6275 HBL1_DMSO_200M_050219_1,6278 HBL1_DMSO_200M_050219_1,6278, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6279 32.409 398.0 224070.0 25 0 10919.0 + 30071 QVDHADGLEK 10 100 556.2725289014801 1110.53050486976 2 556.2725707888603 MULTI CID FTMS 0 0 0 6275 184744.078125 0.1341573617354237 -4 0.224884033203125 4 Unmodified _QVDHADGLEK_ REV__ENSG00000163492|ENST00000443758|CCDC141;REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141 35.61225514009592 0.2039006631696762 3 [DV]QHVDAAEK 10 -1 + 119.89 0.0 0.0 10.796 10.796 94.705 0.0 0.0 0.0 16.672516952396435 16.672516952396435 16.672516952396435 9.164539485499262 0 3.623712505420024 1.5228787452803376 0.805462187404089 0.8252574989159953 [DV]QHVDAAEK;[DV][AG]HVDAAEK;[DV]HQVDAAEK;{[NV]|[RG]}EHVDAAEK;[DV]QHVDAA{I|L}[SG];[DV]H[AG]VDAAEK;[HV]DQVDAAEK;[DV][AG]HVDAA{I|L}[SG];[DV]QHVD[VS]{[NV]|[RG]};{[NV]|[RG]}EHVDAA{I|L}[SG] 10.796;9.9704;9.1151;9.0866;8.2721;8.0299;7.0649;6.9999;6.6537;6.5631 -;-;-;-;-;-;-;-;-;- 1719 + 1 2.341 73355.4 1.0 1320 4957 6275 HBL1_DMSO_200M_050219_1,6279 HBL1_DMSO_200M_050219_1,6279,QVDHADGLEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6280 32.417 468.0 225710.0 25 0 29749.0 -1 0 138 457.2081132973842 456.2008368307842 1 457.2072326540947 MULTI CID FTMS 0 0 0 6275 135976.5 0.6823667949226712 5 -0.1535224914550781 5 3 {M(Oxidation (M))|F}YQ 3 -1 + 40.322 0.0 0.0 8.8387 8.8387 98.243 0.0 0.0 0.0 13.723637474483471 17.134679910804408 13.723637474483471 40.32226753704853 0 0.0 0.0 0.0 0.7134679910804405 {M(Oxidation (M))|F}YQ 8.8387 - 85 + 1 2.341 86072.2 1.0 1321 4957 6275 HBL1_DMSO_200M_050219_1,6280 HBL1_DMSO_200M_050219_1,6280, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6281 32.431 800.0 142090.0 25 0 8033.8 -1 QYRSMDSSM 9 140 568.7192329934203 1135.4239130536405 2 568.7192870974541 MULTI CID FTMS 0 0 0 6275 107962.6796875 0.1466116814364492 2 -0.04498291015625 6 2 Oxidation (M) _QYRSM(Oxidation (M))DSSM(Oxidation (M))_ ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1 12.531546534597751 0.4974689918368763 3 QG[KT]SS{M(Oxidation (M))|F} 7 -1 35.45 0.0 0.0 3.1222 0.0 0.0 382.0893316100842 0.0 382.0893316100842 0.0 11.54901959985743 0.0 0.0 0 0.0 0.0 0.5228787452803376 0.0 QG[KT]SS{M(Oxidation (M))|F} 3.1222 - 878 + 1 2.341 87550.1 0.5799999833106995 1322 4957 6275 HBL1_DMSO_200M_050219_1,6281 HBL1_DMSO_200M_050219_1,6281,QYRSMDSSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6283 32.435 53.0 1169400.0 25 0 185830.0 -1 TATRPITKM 9 75 517.7865055958047 1033.5584582584092 2 517.7868530154228 MULTI CID FTMS 0 0 0 6282 1042669.875 0.004282315701911 112 -4.180458068847656 1 Oxidation (M) _TATRPITKM(Oxidation (M))_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 19.361941925380144 0.3125782356748823 3 KTT[{I|L}P][WP]K 8 -1 46.348 0.0 0.0 4.4843 0.0 0.0 63.99769067324468 0.0 63.99769067324468 0.0 27.469165662315685 0.0 0.0 0 1.2614393726401687 0.0 1.3494850021680094 0.2614393726401688 KTT[{I|L}P][WP]K 4.4843 - 189 + 1 2.341 55612.5 1.0 1323 4958 6282 HBL1_DMSO_200M_050219_1,6283 HBL1_DMSO_200M_050219_1,6283,TATRPITKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6284 32.437 74.0 482870.0 25 0 54108.0 + 7453 EGPGAQQPVGQ 11 64 534.2590934377832 1066.5036339423664 2 534.2598144412041 MULTI CID FTMS 0 0 0 6282 530309.0625 0.0590720908355723 18 -0.4865379333496094 2 Unmodified _EGPGAQQPVGQ_ REV__ENST00000561648.5_1_16:49669817-49669868:-|nuORF 11.494710602746466 0.7960433852372589 3 S[HS]V{[QG]|[NA]} 6 -1 17.254 0.0 0.0 1.6178 0.0 0.0 453.22349745918126 0.0 453.22349745918126 0.0 5.264706236572469 0.0 0.0 0 0.5 0.0 1.0994850021680094 0.0 S[HS]V{[QG]|[NA]} 1.6178 - 27 1 2.341 34301.8 1.0 1324 4958 6282 HBL1_DMSO_200M_050219_1,6284 HBL1_DMSO_200M_050219_1,6284,EGPGAQQPVGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6286 32.441 24.0 3273200.0 25 0 411330.0 + 36602 TAPEDTRRI 9 73 353.524534204172 1057.551773212716 3 353.5244323611259 MULTI CID FTMS 0 0 0 6285 2579326.5 0.9798353826610464 1 -0.0172920227050781 1 Unmodified _TAPEDTRRI_ ENSG00000140650|ENST00000268261|PMM2;ENST00000567697.1_1_16:8904837-8941679:+|nuORF 27.628801355627647 0.1796483985696185 3 [TA]PED 5 4 43.015 0.0 0.0 4.0674 0.0 0.0 0.0 541.321574165218 541.321574165218 23.34962195759409 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + [TA]PED 4.0674 + + 27 + 1 2.341 70399.5 1.0 1325 4959 6285 HBL1_DMSO_200M_050219_1,6286 HBL1_DMSO_200M_050219_1,6286,TAPEDTRRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6287 32.448 355.0 266550.0 25 0 29211.0 + 28105 PPLPQMPHVPP 11 73 605.3283487601788 1208.6421445871574 2 605.3287841677666 MULTI CID FTMS 0 0 0 6285 187031.921875 0.3783827278546535 4 -0.1268806457519531 2 Unmodified _PPLPQMPHVPP_ REV__ENSG00000125363|ENST00000380714|AMELX;REV__nc|ENSG00000125363|Q99217-2|AMELX;REV__nc|ENSG00000125363|Q99217-3|AMELX 13.90604991867851 0.7458848613461305 3 {[QN]|[E{I|L}]|[KN]}H 3 -1 27.447 0.0 0.0 2.2709 0.0 0.0 0.0 826.4335601203936 826.4335601203936 7.296962438796157 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}H 2.2709 - 128 + 1 2.341 71875.5 1.0 1326 4959 6285 HBL1_DMSO_200M_050219_1,6287 HBL1_DMSO_200M_050219_1,6287,PPLPQMPHVPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6288 32.454 355.0 187800.0 25 0 13521.0 36640 TATPTPPPP 9 111 439.73645049689657 877.4583480605932 2 439.7356445193291 MULTI CID FTMS 0 0 0 6285 130383.25 0.0927576592258329 -16 0.7128524780273438 3 Unmodified _TATPTPPPP_ ENST00000420367.1_1_10:112631800-112631956:-|nuORF 26.88365393820708 0.1891292719743517 3 [TA]T 3 6 35.942 0.0 0.0 4.0962 0.0 0.0 0.0 601.3026639073445 601.3026639073445 13.234002963358408 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + [TA]T 4.0962 + + 120 1 2.341 58435.2 1.0 1327 4959 6285 HBL1_DMSO_200M_050219_1,6288 HBL1_DMSO_200M_050219_1,6288,TATPTPPPP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6290 32.459 35.0 1179400.0 25 0 176050.0 + 114 AAKDPSPSV 9 58 436.2296323815122 870.4447118298244 2 436.2296020388603 MULTI CID FTMS 0 0 0 6289 1824398.25 0.9477295656492896 2 -0.09124755859375 1 Unmodified _AAKDPSPSV_ ENSG00000132361|ENST00000651024|CLUH;nc|ENSG00000132361|O75153|CLUH 49.93300154707207 0.0405168250806675 3 [VG][QT]PSPSV 9 4 [VG][QT]PS + + 29.029 22.72 3.991 3.3349 3.3349 50.866 0.0 0.0 0.0 0.0 10.032511901381865 0.0 0.0 0 0.5 0.0 0.6861818737241735 0.0 [VG][QT]PSPSV 3.3349 - 104 + 1 2.341 38236.3 1.0 1328 4960 6289 HBL1_DMSO_200M_050219_1,6290 HBL1_DMSO_200M_050219_1,6290,AAKDPSPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6291 32.46 79.0 750410.0 25 0 95831.0 + 25253 MVPETTHEA 9 66 507.7318138779387 1013.4490748226774 2 507.7318298220634 MULTI CID FTMS 0 0 0 6289 761674.6875 0.8997845929508181 1 -0.0568618774414062 2 Unmodified _MVPETTHEA_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 24.020572477871973 0.2255576514309169 3 TTEP[DP] 6 8 25.125 0.0 0.0 2.4791 0.0 0.0 355.14931915990246 0.0 355.14931915990246 0.0 5.983040005660882 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 TTEP[DP] 2.4791 - 152 1 2.341 57649.5 1.0 1329 4960 6289 HBL1_DMSO_200M_050219_1,6291 HBL1_DMSO_200M_050219_1,6291,MVPETTHEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6292 32.464 166.0 413230.0 25 0 19483.0 + 42375 VTDLPYGVAV 10 96 345.1908757322003 1032.550797796801 3 345.5272094607353 MULTI CID FTMS 0 0 0 6289 229051.625 0.1800637509988731 20 -0.6253662109375 3 Unmodified _VTDLPYGVAV_ REV__ENSG00000140107|ENST00000361529|SLC25A47;REV__nc|ENSG00000140107|Q6Q0C1-2|SLC25A47 6.630372943996041 0.695967137280542 3 Y[HK]P{I|L}T{M(Oxidation (M))|F}K 8 -1 + 30.218 0.0 0.0 2.9265 2.9265 80.497 0.0 0.0 0.0 13.187587626244124 9.24894257273584 9.24894257273584 12.730012720637369 0 0.0 0.0 0.3252574989159953 0.1382104921644452 Y[HK]P{I|L}T{M(Oxidation (M))|F}K;Y[HK]PY[TP]K;Y{I|L}{[ES]|[DT]|[{I|L}C]}P{I|L}[PS]K;Y{I|L}{[ES]|[DT]|[{I|L}C]}PV[TP]K;Y{I|L}{[ES]|[DT]|[{I|L}C]}P{I|L}[QA]{I|L};Y{I|L}{[ES]|[DT]|[{I|L}C]}PV{[NV]|[RG]}{I|L};Y[HK]PY{[NV]|[RG]}{I|L} 2.9265;1.6937;1.6702;1.6207;0.96392;0.91438;0.67238 -;-;-;-;-;-;- 165 + 1 2.341 65201.7 1.0 1330 4960 6289 HBL1_DMSO_200M_050219_1,6292 HBL1_DMSO_200M_050219_1,6292,VTDLPYGVAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6293 32.473 553.0 227710.0 25 0 15133.0 + 40342 VHLTPEEK 8 133 476.7587324731349 951.5029120130696 2 476.7593566775322 MULTI CID FTMS 0 0 0 6289 140714.59375 0.1210760963289761 -6 0.2503738403320312 4 Unmodified _VHLTPEEK_ ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 88.95385435242217 0.0526491763134581 3 VH{I|L}TPEEK 8 0 + 96.469 0.0 0.0 10.139 10.139 95.971 0.0 0.0 0.0 29.42008053022313 9.800630035531968 9.800630035531968 9.800630035531968 0 1.2887254899964358 1.3010299956639813 2.197621246364342 0.25 + + VH{I|L}TPEEK;VH{I|L}TPEASV;VH{I|L}TPEAVS;VH{I|L}[HN]HPV;[HV][HQ]VPHV;VH[HQ]VHPV;[QA]{[CA]|SS}KT{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[EP]EKT{I|L}HV;VH[HQ][Y{I|L}]R;[EP]ETK{I|L}HV 10.139;9.1085;8.9702;4.717;4.0559;3.8288;3.3533;2.9876;2.9054;2.8563 +;-;-;-;-;-;-;-;-;- + 637 + 1 2.341 102304.6 1.0 1331 4960 6289 HBL1_DMSO_200M_050219_1,6293 HBL1_DMSO_200M_050219_1,6293,VHLTPEEK True True VHLTPEEK 32.473411 476.759356677532 18159105.0 6289.0 ENSG00000244734|ENST00000335295|HBB;;ENSG00000223609|ENST00000650601|HBD;;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 10.183204491933187 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6294 32.487 800.0 158510.0 25 0 8915.2 + 38449 TSAVSNQKAHS 11 147 565.2831531886416 0 565.2828857302666 PEAK CID FTMS 0 0 0 6289 114594.5 0.6206016394810403 2 -0.09124755859375 5 Unmodified _TSAVSNQKAHS_ REV__ENST00000246672.3_1_17:38256397-38256628:-|nuORF 29.081581746732265 0.2390039953153819 3 {I|L}SSAS 5 -1 30.843 0.0 0.0 2.733 0.0 0.0 582.2839998637477 98.02530847720936 680.309308340957 0.0 0.0 0.0 0.0 0 0.0 0.0 2.055462187404089 0.0 {I|L}SSAS 2.733 - 289 + 1 2.341 96346.8 0.6000000238418579 1332 4960 6289 HBL1_DMSO_200M_050219_1,6294 HBL1_DMSO_200M_050219_1,6294,TSAVSNQKAHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6295 32.497 566.0 154900.0 25 0 11681.0 + 45647 YPPNSQSKV 9 115 510.26125363982976 1018.5079543464597 2 510.2618896365166 MULTI CID FTMS 0 0 0 6289 107344.7109375 0.5095432063924479 20 -0.6253662109375 6 Unmodified _YVPGLQTQN_ ENST00000476965.5_1_17:19559657-19578882:+|nuORF;nc|ENSG00000072210|P51648-2|ALDH3A2;ENST00000472059.5_1_17:19558694-19578882:+|nuORF;ENSG00000072210|ENST00000176643|ALDH3A2 27.628801355627647 0.1796483985696185 3 YPPN 4 6 50.441 0.0 0.0 4.9525 0.0 0.0 0.0 544.2734469049436 544.2734469049436 38.96019572333878 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3252574989159953 YPPN 4.9525 - 357 + 1 2.341 73041.5 1.0 1333 4960 6289 HBL1_DMSO_200M_050219_1,6295 HBL1_DMSO_200M_050219_1,6295,YVPGLQTQN False False YPPNSQSKV 32.497163 510.261889636517 14828212.0 6289.0 ENST00000476965.5_1_17:19559657-19578882:+|nuORF;;nc|ENSG00000072210|P51648-2|ALDH3A2;;ENST00000472059.5_1_17:19558694-19578882:+|nuORF;;ENSG00000072210|ENST00000176643|ALDH3A2 3.5687851111094155 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6296 32.511 800.0 21738.0 25 0 1217.3 -1 0 33 954.8966376387816 3815.5574446887263 4 955.148974597454 MULTI CID FTMS 0 0 0 6289 92740.671875 0.9469424371478722 2 -0.09124755859375 7 3 Q 1 -1 11.237 0.0 0.0 0.29451 0.0 0.0 790.3557864444691 2894.120422275133 3684.476208719602 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Q 0.29451 - 2 + 1 2.341 23283.1 0.4399999976158142 1334 4960 6289 HBL1_DMSO_200M_050219_1,6296 HBL1_DMSO_200M_050219_1,6296, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6298 32.522 443.0 166870.0 25 0 36264.0 + 27175 PGAPGGGG 8 77 569.2682491292452 568.2609726626451 1 569.2665283083916 MULTI CID FTMS 0 0 0 6297 97259.9375 0.7793852625843022 -1 0.0568618774414062 1 Unmodified _PGAPGGGG_ REV__ENST00000249822.8_1_15:52861129-52861270:-|nuORF 0.7936320650641473 0.8195151834710337 3 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 2.3748 0.0 0.0 403.2149196614717 0.0 403.2149196614717 0.0 9.51544993495972 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.3748 - 17 + 1 2.341 62396.2 1.0 1335 4961 6297 HBL1_DMSO_200M_050219_1,6298 HBL1_DMSO_200M_050219_1,6298,PGAPGGGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6299 32.525 121.0 504550.0 25 0 80541.0 + -1 LTGWPLTMK 9 67 531.7844463002732 1061.5543396673463 2 531.7845336794853 MULTI CID FTMS 0 0 0 6297 493250.84375 0.8081775198004177 -2 0.0741539001464843 2 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 29.081581746732265 0.1611639662936252 3 KTE[RV][HT]K 8 -1 43.99 0.0 0.0 4.1439 0.0 0.0 63.99895822586195 0.0 63.99895822586195 0.0 28.773043837969325 0.0 0.0 0 0.9247425010840048 0.0 1.274227503252014 0.2614393726401688 KTE[RV][HT]K 4.1439 - 197 + 1 2.341 51213.5 1.0 1336 4961 6297 HBL1_DMSO_200M_050219_1,6299 HBL1_DMSO_200M_050219_1,6299,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6300 32.532 389.0 102390.0 25 0 3757.5 -1 0 71 733.0680797127702 2928.2432129846807 4 733.3181030154228 MULTI CID FTMS 0 0 0 6297 234423.140625 0.739493511537673 -3 0.08038330078125 3 3 NK 2 -1 4.464 0.0 0.0 0.15244 0.0 0.0 2187.906800486437 495.1720064752563 2683.0788069616933 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NK 0.15244 - 36 + 1 2.341 38489.1 1.0 1337 4961 6297 HBL1_DMSO_200M_050219_1,6300 HBL1_DMSO_200M_050219_1,6300, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6301 32.545 800.0 321590.0 25 0 27041.0 + 32369 RYQAQHGAL 9 148 522.2731252821839 1042.5316976311676 2 522.2728759646416 MULTI CID FTMS 0 0 0 6297 189994.671875 0.3161970938799896 -3 0.08038330078125 4 Unmodified _RYQAQHGAL_ ENSG00000105516|ENST00000222122|DBP;ENST00000594723.1_1_19:49134096-49134354:-|nuORF 67.34385681178166 0.0221257235307089 3 [AG][YR]AQHGA{I|L} 10 3 + 71.92 0.0 0.0 6.8986 6.8986 89.941 0.0 0.0 0.0 9.43574972449312 48.36696871556163 9.43574972449312 9.164539485499256 0 1.2302046884880935 1.2218487496163564 0.0 1.329689690656103 [AG][YR]AQHGA{I|L};[AG][YR]A[AG]HGA{I|L};[AG]{[QV]|[N{I|L}]|[RA]|[KV]}YQHGA{I|L};[AG][YR]AQHQ{I|L};[AG]{[QV]|[N{I|L}]|[RA]|[KV]}Y[AG]HGA{I|L};[AG][YR]A[AG]HQ{I|L};[AG]{[QV]|[N{I|L}]|[RA]|[KV]}YQHQ{I|L};{I|L}[WP]QA[MN]A{I|L};[AG]{[QV]|[N{I|L}]|[RA]|[KV]}Y[AG]HQ{I|L};{I|L}[WP]QA[C(Carbamidomethyl (C))R]{I|L} 6.8986;6.0195;5.9394;5.6016;5.0603;4.7183;4.6424;4.1109;3.7591;3.5874 -;-;-;-;-;-;-;-;-;- 719 1 2.341 198983.7 0.75 1338 4961 6297 HBL1_DMSO_200M_050219_1,6301 HBL1_DMSO_200M_050219_1,6301,RYQAQHGAL True True RYQAQHGAL 32.545346 522.272875964642 4227219.5 6297.0 ENSG00000105516|ENST00000222122|DBP;;ENST00000594723.1_1_19:49134096-49134354:-|nuORF 6.499673684438069 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6303 32.55 80.0 964120.0 25 0 185180.0 -1 0 76 365.1737826140623 364.1665061474623 1 365.1733581423759 MULTI CID FTMS 0 0 0 6302 683012.4375 0.1548531025149681 5 -0.1656379699707031 1 3 Y 1 -1 13.979 0.0 0.0 3.8387 0.0 0.0 183.09239223320293 0.0 183.09239223320293 0.0 11.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.8387 - 12 + 1 2.341 67277.2 1.0 1339 4962 6302 HBL1_DMSO_200M_050219_1,6303 HBL1_DMSO_200M_050219_1,6303, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6304 32.564 800.0 157530.0 25 0 21044.0 + 4087 DANHTGAVV 9 161 442.2176366979531 882.4207204627062 2 442.2171203494072 MULTI CID FTMS 0 0 0 6302 77869.21875 0.2973954069407001 5 -0.1656379699707031 2 Unmodified _DANHTGAVV_ ENSG00000132823|ENST00000255174|OSER1 16.149105407346934 0.3995459350917656 3 TGAVV 5 4 24.693 0.0 0.0 2.7983 0.0 0.0 437.165819236525 0.0 437.165819236525 0.0 10.088643834802156 0.0 0.0 0 0.6237125054200234 0.0 0.4247425010840047 0.0 + TGAVV 2.7983 + + 130 1 2.341 103676.5 0.5699999928474426 1340 4962 6302 HBL1_DMSO_200M_050219_1,6304 HBL1_DMSO_200M_050219_1,6304,DANHTGAVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6306 32.576 559.0 259660.0 25 0 23785.0 + 4482 DAYDMRKA 8 130 485.2262434620298 968.4379339908596 2 485.2252380251884 MULTI CID FTMS 0 0 0 6305 165120.9375 0.7430457454768051 -2 0.0527267456054687 1 Unmodified _DAYDMRKA_ ENSG00000173418|ENST00000334982|NAA20 29.081581746732265 0.4323690340403521 3 DAYD 4 4 53.844 0.0 0.0 5.5599 0.0 0.0 0.0 501.2611610471961 501.2611610471961 44.91856015504243 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.3054621874040891 0.0 + DAYD 5.5599 + + 150 + 1 2.341 114325.5 1.0 1341 4963 6305 HBL1_DMSO_200M_050219_1,6306 HBL1_DMSO_200M_050219_1,6306,DAYDMRKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6307 32.581 284.0 346820.0 25 0 21442.0 + 32370 RYQAQHGAL 9 136 348.51734325297343 1042.5302003591205 3 348.5166198611259 MULTI CID FTMS 0 0 0 6305 166169.375 0.6951947234743759 -1 0.018341064453125 2 Unmodified _RYQAQHGAL_ ENSG00000105516|ENST00000222122|DBP;ENST00000594723.1_1_19:49134096-49134354:-|nuORF 71.13359017698441 0.0206607516130725 3 [YR]QAQHGA{I|L} 9 0 + 72.234 0.0 0.0 6.9287 6.9287 90.617 0.0 0.0 0.0 3.2568864632742844 59.13479704297593 3.2568864632742844 9.208187539523747 0 1.048455006504028 0.0 0.0 1.4916440611282624 + + [YR]QAQHGA{I|L};[YR]QA[AG]HGA{I|L};[YR][AG]AQHGA{I|L};[YR]QAQHQ{I|L};[VP][HN]AQHGA{I|L};[YR][AG]A[AG]HGA{I|L};[YR]QA[AG]HQ{I|L};[YR][AG]AQHQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}HQAQ{[MG]|[TS]}{I|L};[VP][HN]A[AG]HGA{I|L} 6.9287;6.0454;6.0454;5.9421;5.6637;5.1664;5.0537;5.0537;4.8371;4.7847 +;-;-;-;-;-;-;-;-;- + 444 1 2.341 82282.1 1.0 1342 4963 6305 HBL1_DMSO_200M_050219_1,6307 HBL1_DMSO_200M_050219_1,6307,RYQAQHGAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6308 32.594 738.0 173670.0 25 0 22529.0 + 4089 DANNAKAVV 9 169 451.2408757238837 900.4671985145675 2 451.2415038943291 MULTI CID FTMS 0 0 0 6305 96602.796875 0.7785356589330804 -3 0.109588623046875 3 Unmodified _DANNAKAVV_ chr11:2386156-2386555|46|12.48|0.34|5.22|+|ENST00000381036|CD81,CD81;ENSG00000110651|ENST00000263645|CD81;ENST00000468153.1_1_11:2416081-2418093:+|nuORF;ENST00000531840.1_1_11:2416360-2416819:+|nuORF 53.832793166522166 0.0319663582346103 3 [HV]{I|L}T{M(Oxidation (M))|F} 5 9 31.597 0.0 0.0 3.5089 0.0 0.0 0.0 300.12305723943 300.12305723943 -8.660237021335938 0.0 -8.660237021335938 0.0 0 0.5 0.5086383061657274 0.2302046884880938 0.0 [HV]{I|L}T{M(Oxidation (M))|F} 3.5089 - 647 1 2.341 99439.7 1.0 1343 4963 6305 HBL1_DMSO_200M_050219_1,6308 HBL1_DMSO_200M_050219_1,6308,DANNAKAVV True True DANNAKAVV 32.593794 451.241503894329 695596.4375 6305.0 ENST00000468153.1_1_11:2416081-2418093:+|nuORF;;chr11:2386156-2386555|46|12.48|0.34|5.22|+|ENST00000381036|CD81,CD81;;ENST00000531840.1_1_11:2416360-2416819:+|nuORF;;ENSG00000110651|ENST00000263645|CD81 5.321498394012451 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6309 32.608 800.0 58415.0 25 0 4605.0 -1 0 73 495.4857354199178 1977.9138358132711 4 495.7356750369072 MULTI CID FTMS 0 0 0 6305 80484.46875 1.0 0 0.0 4 3 QGAAHN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 8 -1 31.324 0.0 0.0 1.5837 0.0 0.0 1137.5500009931554 0.0 1137.5500009931554 0.0 24.333975425929 0.0 0.0 0 0.5 0.0 0.5 0.0 QGAAHN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.5837 - 199 + 1 2.341 49288.0 0.5099999904632568 1344 4963 6305 HBL1_DMSO_200M_050219_1,6309 HBL1_DMSO_200M_050219_1,6309, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6311 32.625 800.0 126980.0 25 0 18321.0 + 45874 YYRDARSY 8 100 547.2566266255915 1092.4987003179829 2 547.2560302615166 MULTI CID FTMS 0 0 0 6310 52001.7578125 0.0448213013037063 7 -0.1880302429199218 1 Unmodified _YYRDARSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 34.40172386719151 0.3279500639400574 3 Y[YR]D{[QV]|[N{I|L}]|[RA]|[KV]}SY 8 0 + 39.87 0.0 0.0 3.6494 3.6494 77.891 0.0 0.0 0.0 12.05591267411002 6.972805581256196 6.972805581256196 6.972805581256196 0 0.9247425010840048 0.0 0.0 0.4247425010840047 + + Y[YR]D{[QV]|[N{I|L}]|[RA]|[KV]}SY;Y[YR]DYWK;Y[YR]D[WK]Y;[HM][{I|L}T]DYWK;[HM][{I|L}T]D[WK]Y;[HM][{I|L}T]D{[QV]|[N{I|L}]|[RA]|[KV]}SY;[HM]{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}T]WK;YC(Carbamidomethyl (C))[Q{I|L}][W{I|L}]NP;YC(Carbamidomethyl (C))[Q{I|L}][W{I|L}]PN 3.6494;3.0112;2.8806;2.5459;2.4153;2.344;0.64985;0.14076;0.026395 +;-;-;-;-;-;-;-;- + 123 + 1 2.349 81128.7 0.699999988079071 1345 4964 6310 HBL1_DMSO_200M_050219_1,6311 HBL1_DMSO_200M_050219_1,6311,YYRDARSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6312 32.628 168.0 542080.0 25 0 44293.0 + 4478 DAYDMRKA 8 111 323.8200696733191 0 323.8199951052666 PEAK CID FTMS 0 0 0 6310 299162.3125 0.8675181698918302 -1 0.0439262390136718 2 Unmodified _DAYAMKRD_ ENSG00000173418|ENST00000334982|NAA20 26.88365393820708 0.2878692218834006 3 D 1 7 7.7866 0.0 0.0 1.2061 0.0 0.0 97.35173012059133 430.2245577447876 527.5762878653788 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + D 1.2061 + + 25 + 1 2.349 76237.6 1.0 1346 4964 6310 HBL1_DMSO_200M_050219_1,6312 HBL1_DMSO_200M_050219_1,6312,DAYAMKRD False False DAYDMRKA 32.62837 323.819995105267 13033047.125 6310.0 ENSG00000173418|ENST00000334982|NAA20 6.0543263753255205 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6313 32.642 800.0 309830.0 25 0 47844.0 -1 0 86 931.9284110304822 1861.842269127764 2 931.9294921755792 MULTI CID FTMS 0 0 0 6310 170188.078125 0.3170214625013083 -5 0.170806884765625 3 3 {M(Oxidation (M))|F} 1 -1 10.485 0.0 0.0 0.56313 0.0 0.0 1696.799740906864 0.0 1696.799740906864 0.0 0.6516688424750328 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.56313 - 16 + 1 2.349 171945.8 0.5799999833106995 1347 4964 6310 HBL1_DMSO_200M_050219_1,6313 HBL1_DMSO_200M_050219_1,6313, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6314 32.648 312.0 199510.0 25 0 16913.0 + 35046 SQSNMTQKV 9 102 511.7502264810168 1021.4859000288336 2 511.7501708865166 MULTI CID FTMS 0 0 0 6310 153770.59375 0.4139957769672661 -2 0.0622673034667968 4 Unmodified _SQSNMTQKV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 55.50274090549119 0.0285720310785888 3 {[QS]|[NT]}SNMTQKV 9 0 + 69.056 0.0 0.0 6.7603 6.7603 90.151 0.0 0.0 0.0 56.54374695110489 11.75657273439738 11.75657273439738 9.208187539523747 0 0.8494850021680094 1.154901959985743 0.3807196863200844 1.1382104921644451 + + {[QS]|[NT]}SNMTQKV;{[QS]|[NT]}SGGMTQKV;{[QS]|[NT]}SNMT[AG]KV;{[QS]|[NT]}SGGMT[AG]KV;{[QS]|[NT]}S[HA]{[YC]|[HE]}KV;{[QS]|[NT]}SN[HK][QP]P;{[QS]|[NT]}S[HA][KG]PNP 6.7603;5.8589;5.8589;4.9617;3.9481;2.9981;2.9025 +;-;-;-;-;-;- + 313 + 1 2.349 55658.8 1.0 1348 4964 6310 HBL1_DMSO_200M_050219_1,6314 HBL1_DMSO_200M_050219_1,6314,SQSNMTQKV True True SQSNMTQKV 32.64791 511.750170886517 1533773.625 6310.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 6.452011267344157 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6315 32.653 306.0 238400.0 25 0 20131.0 + 41533 VPNTSQSQV 9 115 480.243531253019 958.472509572838 2 480.2434265017509 MULTI CID FTMS 0 0 0 6310 127643.3046875 0.255725738416437 -4 0.1535148620605468 5 Unmodified _VPNTSQSQV_ ENSG00000103064|ENST00000219343|SLC7A6 34.40172386719151 0.1061884637610825 3 [AG]SPVSQSQV 10 5 + 60.658 0.0 0.0 6.3286 6.3286 85.435 0.0 0.0 0.0 10.42796583575644 6.689615513722202 6.689615513722202 6.020599913279625 0 0.4929928190999391 1.5228787452803376 1.7134679910804405 0.0 [AG]SPVSQSQV;[AG]SPSVQSQV;[AG]SPVS[AG]SQV;[AG]SPSQVSQV;{[QS]|[NT]}PVSQSQV;[AG]SPSV[AG]SQV;{[QS]|[NT]}PSVQSQV;[AG]SPS[AG]VSQV;[NP]TVSQSQV;{[QS]|[NT]}PVS[AG]SQV 6.3286;5.7005;5.3725;5.3571;5.2407;4.7443;4.6125;4.4009;4.3245;4.2799 -;-;-;-;-;-;-;-;-;- 1684 1 2.349 61176.7 1.0 1349 4964 6310 HBL1_DMSO_200M_050219_1,6315 HBL1_DMSO_200M_050219_1,6315,VPNTSQSQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6316 32.667 800.0 86120.0 25 0 28570.0 -1 0 78 613.2830798486475 612.2758033820475 1 613.2819702029228 MULTI CID FTMS 0 0 0 6310 102864.0703125 0.6293069183702966 5 -0.1397590637207031 6 3 {[TV]|[{I|L}S]}GSSY 6 -1 + 50.511 0.0 0.0 8.2497 8.2497 82.914 0.0 0.0 0.0 0.8258295414112808 0.8258295414112808 0.8258295414112808 0.8258295414112808 0 1.064909327626439 0.9208187539523752 1.2059771852360797 0.0 {[TV]|[{I|L}S]}GSSY;{I|L}SGSSY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSY;{[CA]|SS}G{I|L}SY;[SG]S{I|L}SY;[SG]{I|L}SSY;{[SA]|[TG]}VSSY;{[CA]|SS}GYS{I|L};[SG]SYS{I|L};{[CA]|SS}GSY{I|L} 8.2497;8.1148;5.7335;5.1983;5.0272;4.8738;4.4915;4.0932;3.9222;3.585 -;-;-;-;-;-;-;-;-;- 189 1 2.349 56742.6 0.5299999713897705 1350 4964 6310 HBL1_DMSO_200M_050219_1,6316 HBL1_DMSO_200M_050219_1,6316, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6318 32.672 49.0 1529200.0 25 0 127590.0 + -1 TIHIFRIMY 9 81 403.8879066811003 1208.6418906435008 3 403.8875915408134 MULTI CID FTMS 0 0 0 6317 1141921.875 0.1591855214626944 10 -0.2293930053710937 1 Oxidation (M) _TIHIFRIM(Oxidation (M))Y_ REV__ENST00000316660.6_1_18:57570359-57570470:+|nuORF 8.155526934196011 0.6299788542272896 3 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 7 -1 41.616 0.0 0.0 3.4432 0.0 0.0 0.0 266.1622408502563 266.1622408502563 25.74942396098662 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 3.4432 - 212 + 1 2.349 64838.9 1.0 1351 4965 6317 HBL1_DMSO_200M_050219_1,6318 HBL1_DMSO_200M_050219_1,6318,TIHIFRIMY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6319 32.676 244.0 200960.0 25 0 8063.1 + 30072 QVDHADGLEK 10 86 556.2725289014801 1110.53050486976 2 556.2726928591728 MULTI CID FTMS 0 0 0 6317 190461.21875 0.1383090320390394 4 -0.0800933837890625 2 Unmodified _QVDHADGLEK_ REV__ENSG00000163492|ENST00000443758|CCDC141;REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141 32.037481411007896 0.2488723560272515 3 [DV]HQVDAAEK 10 -1 + 103.64 0.0 0.0 9.3327 9.3327 96.435 0.0 0.0 0.0 25.374689380265963 16.53212513775344 16.53212513775344 12.971736348700103 0 2.6861818737241734 1.5228787452803376 0.5629529932484498 0.3807196863200844 [DV]HQVDAAEK;[DV]H[AG]VDAAEK;[HV]DQVDAAEK;[DV]HAAEAAAEK;[DV]A[HA]EAAAEK;[HV]D[AG]VDAAEK;[DV]HQVD[VS]{[NV]|[RG]};[DV]H[AG]VD[VS]{[NV]|[RG]};[DV]HAAE{[NV]|[RG]}EK;[HV]DAAEAAAEK 9.3327;8.1647;7.0478;6.5947;6.0526;5.8797;5.2266;4.4013;4.3664;4.3098 -;-;-;-;-;-;-;-;-;- 1066 1 2.349 43132.5 1.0 1352 4965 6317 HBL1_DMSO_200M_050219_1,6319 HBL1_DMSO_200M_050219_1,6319,QVDHADGLEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6320 32.678 61.0 1131200.0 25 0 131930.0 + 18126 KTLQVKDKA 9 92 515.8164132298457 1029.6182735264913 2 515.8163940310478 MULTI CID FTMS 0 0 0 6317 1028912.5 0.2160693454684053 -4 0.1563186645507812 3 Unmodified _KTLQVKDKA_ ENST00000532980.3_1_11:59055317-59056556:-|nuORF 38.61474834105838 0.0830609365873449 3 KT{I|L}Q[QT]{I|L}AK 9 5 + 86.604 0.0 0.0 8.4113 8.4113 93.729 0.0 0.0 0.0 73.83975286200271 18.22559982972642 18.22559982972642 9.208187539523747 0 2.4489700043360187 0.0 0.4247425010840047 0.3252574989159953 KT{I|L}Q[QT]{I|L}AK;KT{I|L}[AG][QT]{I|L}AK;[KT]{I|L}Q[QT]{I|L}AK;[QT]{I|L}K[QT]{I|L}AK;[Q{I|L}]TK[QT]{I|L}AK;[{I|L}A]GTK[QT]{I|L}AK;[QT]{I|L}Q[KT]{I|L}AK;[Q{I|L}]TQ[KT]{I|L}AK;[{I|L}A]GTQ[KT]{I|L}AK;[QT]{I|L}[AG][KT]{I|L}AK 8.4113;7.5169;4.4698;4.0412;3.8907;3.7694;3.122;2.9716;2.8502;2.2277 -;-;-;-;-;-;-;-;-;- 343 + 1 2.349 59201.5 1.0 1353 4965 6317 HBL1_DMSO_200M_050219_1,6320 HBL1_DMSO_200M_050219_1,6320,KTLQVKDKA True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6321 32.679 61.0 868560.0 25 0 117700.0 + 2656 ATDKNDPHL 9 89 337.5017142683486 1009.483313405246 3 337.5013000369072 MULTI CID FTMS 0 0 0 6317 758144.3125 0.6552136828034177 -7 0.2367019653320312 4 Unmodified _ATDKNDPHL_ ENSG00000167996|ENST00000273550|FTH1;ENST00000394290.3_1_2:27615653-27615842:-|nuORF 11.640296217721598 0.521594087909532 3 [TA]ANDT 6 5 24.2 0.0 0.0 2.3973 0.0 0.0 0.0 433.2231565051084 433.2231565051084 14.173068356853854 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.6989700043360187 0.0 [TA]ANDT 2.3973 - 71 1 2.349 46971.5 1.0 1354 4965 6317 HBL1_DMSO_200M_050219_1,6321 HBL1_DMSO_200M_050219_1,6321,ATDKNDPHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6322 32.682 136.0 494360.0 25 0 48333.0 + 3569 DAAAVGNHV 9 100 427.21158250053554 852.4086120678711 2 427.2114440798759 MULTI CID FTMS 0 0 0 6317 494462.625 1.0 0 0.0 5 Unmodified _DAAAVGNHV_ ENSG00000159593|ENST00000290810|NAE1;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-3|NAE1;nc|ENSG00000159593|Q13564-4|NAE1 78.14939416004806 0.0179651292570206 3 {[DA]|[EG]}AAVGNVH 9 2 + 79.995 0.0 0.0 9.3846 9.3846 96.58 0.0 0.0 0.0 67.31422028117157 6.758825435160233 6.758825435160233 13.399480616943508 0 1.8807196863200843 1.6989700043360187 0.0 1.1989700043360187 {[DA]|[EG]}AAVGNVH;{[DA]|[EG]}AAVV[NG]H;{[DA]|[EG]}AAVGGGVH;{[DA]|[EG]}AA[H{I|L}]QQ;{[DA]|[EG]}A[H{I|L}]AQQ;{[DA]|[EG]}[Q{I|L}]GNVH;AADA[H{I|L}]QQ;[DP]RGV[Y{M(Oxidation (M))|F}];{[DA]|[EG]}[Q{I|L}]V[NG]H;{[DA]|[EG]}[Q{I|L}]GGGVH 9.3846;7.8127;6.8978;6.0285;4.7356;4.6966;3.9693;3.8758;3.1247;3.1118 -;-;-;-;-;-;-;-;-;- 239 + 1 2.349 57226.4 1.0 1355 4965 6317 HBL1_DMSO_200M_050219_1,6322 HBL1_DMSO_200M_050219_1,6322,DAAAVGNHV True True DAAAVGNHV 32.682162 427.211444079876 1977864.75 6317.0 nc|ENSG00000159593|Q13564-4|NAE1;;nc|ENSG00000159593|Q13564-3|NAE1;;nc|ENSG00000159593|Q13564-2|NAE1;;ENSG00000159593|ENST00000290810|NAE1 6.297207673390706 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6323 32.687 257.0 417500.0 25 0 28816.0 23147 LSPVAIEQTSL 11 123 386.5512237838781 1156.6318419518343 3 386.5508911013603 MULTI CID FTMS 0 0 0 6317 286558.9375 0.0990910182525115 -8 0.2754554748535156 6 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 34.93206674587334 0.2904649469012649 3 QTS{I|L} 4 7 41.146 0.0 0.0 3.5574 0.0 0.0 709.3988485199781 0.0 709.3988485199781 0.0 26.55217062803077 0.0 0.0 0 0.8494850021680094 0.0 1.0 0.0 + QTS{I|L} 3.5574 + + 255 1 2.349 90272.2 1.0 1356 4965 6317 HBL1_DMSO_200M_050219_1,6323 HBL1_DMSO_200M_050219_1,6323,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6325 32.691 74.0 1051900.0 25 0 154150.0 + -1 IQRLETMK 8 79 517.7865055958047 1033.5584582584092 2 517.7867309451103 MULTI CID FTMS 0 0 0 6324 859860.75 0.0035315062604853 120 -4.489418029785156 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 KTT[{I|L}P][WP]K 8 -1 52.357 0.0 0.0 5.0657 0.0 0.0 63.99781177679046 0.0 63.99781177679046 0.0 39.08539067949008 0.0 0.0 0 1.6421590589602533 0.0 1.3494850021680094 0.3054621874040891 KTT[{I|L}P][WP]K 5.0657 - 154 + 1 2.349 63686.0 1.0 1357 4966 6324 HBL1_DMSO_200M_050219_1,6325 HBL1_DMSO_200M_050219_1,6325,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6326 32.699 405.0 343580.0 25 0 102830.0 + 31464 RPRQNSLSSL 10 103 579.3230347797295 1156.6315166262589 2 579.3232299685478 MULTI CID FTMS 0 0 0 6324 282915.59375 0.1439863410094672 -6 0.23272705078125 2 Unmodified _RPRQNSLSSL_ ENST00000535682.1_17:73314626-73315194:-|nuORF 9.5439744041441 0.6824900257974675 3 S{I|L} 2 8 22.959 0.0 0.0 1.985 0.0 0.0 938.5045993237068 0.0 938.5045993237068 0.0 -1.7339374311232802 -1.7339374311232802 0.0 0 0.5 0.0 0.0 0.0 + S{I|L} 1.985 + + 115 1 2.349 111290.9 1.0 1358 4966 6324 HBL1_DMSO_200M_050219_1,6326 HBL1_DMSO_200M_050219_1,6326,RPRQNSLSSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6327 32.701 138.0 764310.0 25 0 54693.0 + 23445 LTFLPPSKK 9 138 344.2137947418412 1029.6195548257235 3 344.2135192751884 MULTI CID FTMS 0 0 0 6324 457694.125 0.3251962761812962 -4 0.1414794921875 3 Unmodified _LTFLPPSKK_ ENSG00000165186|ENST00000379361|PTCHD1;nc|ENSG00000165186|Q96NR3-2|PTCHD1 42.09456458481378 0.0639583784996157 3 [{I|L}T]KQTQ{I|L}AK 9 6 [{I|L}T]KQ + + 45.516 28.065 5.9676 4.4207 4.4207 53.784 0.0 0.0 0.0 0.0 17.45161480512637 0.0 0.0 0 0.6382104921644451 0.0 0.0 0.958170666312956 [{I|L}T]KQTQ{I|L}AK 4.4207 - 466 + 1 2.349 87508.4 1.0 1359 4966 6324 HBL1_DMSO_200M_050219_1,6327 HBL1_DMSO_200M_050219_1,6327,LTFLPPSKK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6328 32.711 551.0 152150.0 25 0 18020.0 + 17603 KPTAAFHLL 9 110 499.2930442726483 996.5715356120966 2 499.2927734255791 MULTI CID FTMS 0 0 0 6324 96084.1875 0.6580252398660448 -3 0.123138427734375 4 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 11.640296217721598 0.521594087909532 3 KPT 3 -1 34.253 0.0 0.0 3.437 0.0 0.0 0.0 667.353703229703 667.353703229703 24.16386562212267 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 KPT 3.437 + + 130 + 1 2.349 64783.0 1.0 1360 4966 6324 HBL1_DMSO_200M_050219_1,6328 HBL1_DMSO_200M_050219_1,6328,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6330 32.716 42.0 1170900.0 25 0 122040.0 -1 TATPTIMK 8 77 439.73645049689657 877.4583480605932 2 439.7368041872978 MULTI CID FTMS 0 0 0 6329 1276360.25 0.9080321982992364 -8 0.2741775512695312 1 Oxidation (M) _TATPTIM(Oxidation (M))K_ ENSG00000020577|ENST00000554335|SAMD4A;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 36.12702656103203 0.299085846329477 3 [TA]TP{I|L}T{M(Oxidation (M))|F}K 8 -1 + 72.305 0.0 0.0 8.2402 8.2402 97.889 0.0 0.0 0.0 57.72418515321603 10.432597985977663 10.432597985977663 60.57341546735546 0 1.0 1.6989700043360187 1.1861818737241734 0.1549471895720985 [TA]TP{I|L}T{M(Oxidation (M))|F}K;[TP]{I|L}[KT]{M(Oxidation (M))|F}[TA];[TP][YK]PT[TA];[TP]{I|L}[KT]T{[MS]|[{M(Oxidation (M))|F}A]};[TP]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T[TA];[KT]T[{I|L}P]{M(Oxidation (M))|F}[TA];{[QV]|[N{I|L}]|[RA]|[KV]}[YV]PT[TA];[KT]T[{I|L}P]T{[MS]|[{M(Oxidation (M))|F}A]} 8.2402;1.3369;1.1363;1.1363;0.7932;0.26689;0.26689;0.066204 -;-;-;-;-;-;-;- 133 + 1 2.349 46369.6 1.0 1361 4967 6329 HBL1_DMSO_200M_050219_1,6330 HBL1_DMSO_200M_050219_1,6330,TATPTIMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6331 32.722 353.0 185340.0 25 0 17777.0 33609 SIPSSDFLCV 10 109 534.2590934377832 1066.5036339423664 2 534.2587158083916 MULTI CID FTMS 0 0 0 6329 213668.015625 0.0238008688144123 27 -0.8388023376464844 2 Unmodified _SIPSSDFLCV_ ENSG00000106804|ENST00000223642|C5 10.073929032068715 0.6785112666868882 3 SSHV{[QG]|[NA]} 6 8 26.119 0.0 0.0 2.4491 0.0 0.0 453.2224903791032 0.0 453.2224903791032 0.0 11.90105620855803 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 SSHV{[QG]|[NA]} 2.4491 - 194 1 2.349 57894.8 1.0 1362 4967 6329 HBL1_DMSO_200M_050219_1,6331 HBL1_DMSO_200M_050219_1,6331,SIPSSDFLCV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6332 32.724 74.0 1212700.0 25 0 318310.0 -1 0 92 307.6844276606387 0 307.6844970583916 PEAK CID FTMS 0 0 0 6329 545196.75 1.0 0 0.0 3 3 A 1 -1 10.183 0.0 0.0 1.6602 0.0 0.0 131.09404909210616 408.2003267877563 539.2943758798624 0.0 0.0 0.0 0.0 0 0.6203715150305281 0.0 0.0 0.0 A 1.6602 - 8 + 1 2.349 76994.1 1.0 1363 4967 6329 HBL1_DMSO_200M_050219_1,6332 HBL1_DMSO_200M_050219_1,6332, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6333 32.726 124.0 738540.0 25 0 74504.0 + 25643 NFSHGTHEY 9 120 364.48993648880855 1090.4479800666256 3 364.4894286990166 MULTI CID FTMS 0 0 0 6329 297543.8125 0.0479587123394183 -7 0.2568855285644531 4 Unmodified _NFSHGTHEY_ ENSG00000067225|ENST00000335181|PKM;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;ENST00000564276.1_1_15:72502555-72511438:-|nuORF;nc|ENSG00000067225|P14618-2|PKM 28.486842064014134 0.1687311288560894 3 [HS]AHSEY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 9 7 + 30.6 0.0 0.0 2.8062 2.8062 79.403 0.0 0.0 0.0 7.17371328289893 13.204482088348117 7.17371328289893 9.719712763997563 0 0.0 0.8538719643217619 0.0 0.0 [HS]AHSEY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HS]AE[HS]Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HS]AEY[HS]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[{M(Oxidation (M))|F}V]WSEY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SH{[SA]|[TG]}N[WE];{[SA]|[TG]}C[Y{M(Oxidation (M))|F}]SW{NN|[MP]|[D{I|L}]|[EV]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SH{[SA]|[TG]}NS{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]SWEY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[HG]|PP}THSEY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[SA]|[TG]}CS[Y{M(Oxidation (M))|F}]W{NN|[MP]|[D{I|L}]|[EV]} 2.8062;1.9149;1.6388;1.5437;1.3183;1.2049;1.2038;1.1061;1.0172;0.92883 -;-;-;-;-;-;-;-;-;- 474 1 2.349 76958.8 1.0 1364 4967 6329 HBL1_DMSO_200M_050219_1,6333 HBL1_DMSO_200M_050219_1,6333,NFSHGTHEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6334 32.731 235.0 289970.0 25 0 19100.0 + 25644 NFSHGTHEY 9 99 546.2307404309852 1090.4469279287705 2 546.2310058474541 MULTI CID FTMS 0 0 0 6329 211900.125 0.0521271120969637 -7 0.2568855285644531 5 Unmodified _NFSHGTHEY_ ENSG00000067225|ENST00000335181|PKM;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;ENST00000564276.1_1_15:72502555-72511438:-|nuORF;nc|ENSG00000067225|P14618-2|PKM 63.960520009940105 0.0238892913700936 3 [HS]AHS{M(Oxidation (M))|F}NEY 9 6 + 44.374 0.0 0.0 4.0693 4.0693 71.449 0.0 0.0 0.0 5.863650028014433 8.460696996448576 5.863650028014433 1.249387366082999 0 0.7614393726401688 0.9208187539523752 0.805462187404089 0.4247425010840047 [HS]AHS{M(Oxidation (M))|F}NEY;[HS]ASH{M(Oxidation (M))|F}NEY;[{M(Oxidation (M))|F}V]WS{M(Oxidation (M))|F}NEY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y[HS]N{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[DA]|[EG]}VC{I|L}{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SHYN{M(Oxidation (M))|F}Y;N{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}S[HN]Y;[HS]{M(Oxidation (M))|F}NYN{M(Oxidation (M))|F}Y;N{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}H[NS]Y;[HS]AE[HS]N{M(Oxidation (M))|F}Y 4.0693;3.9547;3.5316;3.4847;3.4652;3.4484;3.2934;3.2116;3.1788;3.0803 -;-;-;-;-;-;-;-;-;- 934 1 2.349 57811.5 1.0 1365 4967 6329 HBL1_DMSO_200M_050219_1,6334 HBL1_DMSO_200M_050219_1,6334,NFSHGTHEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6335 32.736 308.0 354280.0 25 0 62881.0 + 23333 LTATRGTLD 9 120 474.26145883278775 946.5083647323756 2 474.2606689333916 MULTI CID FTMS 0 0 0 6329 157845.03125 0.397839836227737 -6 0.2000236511230468 6 Unmodified _LTATRGTLD_ REV__ENST00000407780.7_1_21:45646995-45647220:-|nuORF 37.97399986684836 0.0865783450051559 3 [{I|L}T]AQSVSNK 9 -1 + 81.437 0.0 0.0 8.6039 8.6039 93.983 0.0 0.0 0.0 64.98319373273603 12.389465451849093 12.389465451849093 9.208187539523747 0 0.7742275032520141 2.0 0.8494850021680094 0.8366968715561641 [{I|L}T]AQSVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSNK;[{I|L}T]A[AG]SVSGGK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVSQA[VP];[{I|L}T]A[{M(Oxidation (M))|F}T]QA[VP];[{I|L}T]A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R{NN|[MP]|[D{I|L}]|[EV]};[{I|L}T]AQ[{M(Oxidation (M))|F}T]V[PA];[{I|L}A]YVSQA[VP];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VSQA[VP] 8.6039;7.6311;7.6311;6.6628;5.4863;5.4175;5.2389;5.0947;4.6275;4.5935 -;-;-;-;-;-;-;-;-;- 511 + 1 2.349 89720.8 1.0 1366 4967 6329 HBL1_DMSO_200M_050219_1,6335 HBL1_DMSO_200M_050219_1,6335,LTATRGTLD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6337 32.741 89.0 676240.0 25 0 62911.0 + 40343 VHLTPEEK 8 82 476.7587324731349 951.5029120130696 2 476.7585937380791 MULTI CID FTMS 0 0 0 6336 789503.875 0.6793186454521528 2 -0.0367279052734375 1 Unmodified _VHLTPEEK_ ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 69.10491478415734 0.1133161663954314 3 VH{I|L}TPEEK 8 0 + 94.326 0.0 0.0 9.9133 9.9133 98.735 0.0 0.0 0.0 68.41805264274505 16.638568026386693 16.638568026386693 35.26638380027002 0 1.3807196863200843 1.3979400086720375 1.4361818737241734 0.2614393726401688 + + VH{I|L}TPEEK;VHR{[{M(Oxidation (M))|F}H]|[RQ]}EK;V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T[NS]EK;[H{I|L}]T[HA]R{[MS]|[{M(Oxidation (M))|F}A]} 9.9133;6.2069;2.5424;2.1377 +;-;-;- + 222 + 1 2.349 54902.4 1.0 1367 4968 6336 HBL1_DMSO_200M_050219_1,6337 HBL1_DMSO_200M_050219_1,6337,VHLTPEEK True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6338 32.748 380.0 347620.0 25 0 53843.0 + 25254 MVPETTHEA 9 122 507.7318138779387 1013.4490748226774 2 507.7316772341728 MULTI CID FTMS 0 0 0 6336 283507.03125 0.3349136618275452 9 -0.2423553466796875 2 Unmodified _MVPETTHEA_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 36.12702656103203 0.0967173616627612 3 [EP]TTEEP 7 4 43.765 0.0 0.0 4.3185 0.0 0.0 0.0 227.0861603522117 227.0861603522117 14.772233715808856 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 1.079689690656103 0.0 [EP]TTEEP 4.3185 - 930 1 2.349 107459.1 1.0 1368 4968 6336 HBL1_DMSO_200M_050219_1,6338 HBL1_DMSO_200M_050219_1,6338,MVPETTHEA True True MVPETTHEA 32.747509 507.731677234173 34064316.0 6336.0 nc|ENSG00000100023|Q13356-2|PPIL2;;ENSG00000100023|ENST00000398831|PPIL2 7.997889677683513 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6340 32.755 317.0 265250.0 25 0 34220.0 7477 EGSLCQTQV 9 118 482.7239940725484 963.4334352118968 2 482.7241393923759 MULTI CID FTMS 0 0 0 6339 93516.8359375 0.1944188164312535 -10 0.3105659484863281 1 Unmodified _EGSLCQTQV_ ENSG00000204140|ENST00000373861|CLPSL1 15.847184025352805 0.4077185912009129 3 {[DA]|[EG]}V 3 6 18.785 0.0 0.0 1.9498 0.0 0.0 0.0 675.2778620519936 675.2778620519936 -1.0283439281688054 0.0 -1.0283439281688054 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[DA]|[EG]}V 1.9498 - 374 1 2.349 69389.3 1.0 1369 4969 6339 HBL1_DMSO_200M_050219_1,6340 HBL1_DMSO_200M_050219_1,6340,EGSLCQTQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6341 32.759 196.0 367200.0 25 0 32988.0 + 2657 ATDKNDPHL 9 101 505.74893356009886 1009.4833141869976 2 505.7491332888603 MULTI CID FTMS 0 0 0 6339 361050.09375 1.0 0 0.0 2 Unmodified _ATDKNDPHL_ ENSG00000167996|ENST00000273550|FTH1;ENST00000394290.3_1_2:27615653-27615842:-|nuORF 49.55428908609986 0.0413471690215031 3 [TA]ANDTA 7 5 50.296 0.0 0.0 4.9823 0.0 0.0 0.0 362.1833039935735 362.1833039935735 34.87887411444986 0.0 0.0 0.0 0 1.0 1.154901959985743 0.75 0.7302046884880937 [TA]ANDTA 4.9823 - 410 1 2.349 60788.3 1.0 1370 4969 6339 HBL1_DMSO_200M_050219_1,6341 HBL1_DMSO_200M_050219_1,6341,ATDKNDPHL True True ATDKNDPHL 32.759203 505.74913328886 2385803.75 6339.0 ENST00000394290.3_1_2:27615653-27615842:-|nuORF;;ENSG00000167996|ENST00000273550|FTH1 6.142944971720378 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6342 32.773 800.0 113060.0 25 0 12518.0 + -1 VNDPRPQHKYNKL 13 95 536.9588950834574 1607.854855850572 3 536.9588500857353 MULTI CID FTMS 0 0 0 6339 143898.796875 0.9395404501274568 -2 0.0363883972167968 3 Carbamidomethyl (C) _YTWRRRRVC(Carbamidomethyl (C))KQ_ ENSG00000108578|ENST00000261714|BLMH;ENST00000577306.1_1_17:28599577-28599908:-|nuORF 0.0833504608790944 0.8747546825782322 3 V[MD]NK[YN]KH 9 -1 34.103 0.0 0.0 2.121 0.0 0.0 0.0 475.2443026178344 475.2443026178344 18.1606124668106 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3807196863200844 V[MD]NK[YN]KH 2.121 - 297 + 1 2.349 78494.0 0.6700000166893005 1371 4969 6339 HBL1_DMSO_200M_050219_1,6342 HBL1_DMSO_200M_050219_1,6342,YTWRRRRVCKQ False False VNDPRPQHKYNKL 32.773017 536.958850085735 1046967.0625 6339.0 ENSG00000108578|ENST00000261714|BLMH;;ENST00000577306.1_1_17:28599577-28599908:-|nuORF 6.416675408681233 3.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6344 32.782 298.0 199880.0 25 0 15609.0 23675 LTSEVHSV 8 91 436.2296323815122 870.4447118298244 2 436.2289916872978 MULTI CID FTMS 0 0 0 6343 92729.1328125 0.0481704807398417 12 -0.3966789245605469 1 Unmodified _LTSEVHSV_ ENSG00000064102|ENST00000261191|INTS13;nc|ENSG00000064102|Q9NVM9-2|INTS13 18.13498045792455 0.6430038125133779 3 AA[RV]GDSPV 9 7 AA[RV]GD + + 17.774 -3.5564 -0.62472 2.0419 2.0419 48.867 0.0 0.0 0.0 0.0 7.051058956375762 0.0 0.0 0 0.5 0.0 0.0 0.0 AA[RV]GDSPV 2.0419 - 128 + 1 2.344 52228.7 1.0 1372 4970 6343 HBL1_DMSO_200M_050219_1,6344 HBL1_DMSO_200M_050219_1,6344,LTSEVHSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6345 32.796 800.0 124890.0 25 0 8692.2 + 35507 STMSTNGIPR 10 147 540.2612777208125 1078.5080025084249 2 540.2620727419853 MULTI CID FTMS 0 0 0 6343 143168.703125 0.0175043835477844 -13 0.3810272216796875 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 53.40400417844725 0.0601721406801337 3 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 69.346 0.0 0.0 6.4298 6.4298 82.079 0.0 0.0 0.0 7.269987279362624 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.9247425010840048 0.0 0.4247425010840047 0.4247425010840047 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}S[KT][QP]SP;[HD]T{[QV]|[N{I|L}]|[RA]|[KV]}A[QP]SP;[HD]T{[QV]|[N{I|L}]|[RA]|[KV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VH 6.4298;6.1507;5.5801;5.301;2.1165;0.21761;0.11455 -;+;-;-;-;-;- + 320 + 1 2.344 79268.6 0.6600000262260437 1373 4970 6343 HBL1_DMSO_200M_050219_1,6345 HBL1_DMSO_200M_050219_1,6345,STMSTNGIPR True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6347 32.812 800.0 198030.0 25 0 24037.0 + -1 LTGWPLTMK 9 129 531.7844463002732 1061.5543396673463 2 531.7849609255791 MULTI CID FTMS 0 0 0 6346 192442.796875 0.3153120653569953 8 -0.2349929809570312 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 32.78568957990786 0.1150597335874693 3 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K 9 -1 + 53.954 0.0 0.0 5.0825 5.0825 85.298 0.0 0.0 0.0 4.458865705675876 41.04446048438772 4.458865705675876 9.29703547354768 0 1.424742501084005 0.0 0.8494850021680094 0.6139829889124311 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}P]T{M(Oxidation (M))|F}K;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}P]TT{[CA]|SS};[HT]V[KT]TT{M(Oxidation (M))|F}K;[KP][MT][{I|L}P]T{M(Oxidation (M))|F}K;[RH]T[PG][HV]MK;[KT]{[{M(Oxidation (M))|F}H]|[RQ]}[PG]TT{[CA]|SS};{[SA]|[TG]}[W{I|L}][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T{[TV]|[{I|L}S]}HGV[YG];[KT]T{[TV]|[{I|L}S]}HR[YG] 5.0825;4.2067;3.5279;3.3892;3.2647;3.1992;2.8695;2.8334;2.6603;2.6121 -;-;-;-;-;-;-;-;-;- 1076 1 2.344 122534.1 0.800000011920929 1374 4971 6346 HBL1_DMSO_200M_050219_1,6347 HBL1_DMSO_200M_050219_1,6347,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6350 32.83 702.0 344230.0 25 0 31317.0 -1 EHYRRACRRCR 11 131 521.5920377710207 1561.754283913262 3 521.9265014529228 MULTI CID FTMS 0 0 0 6349 210020.828125 0.6904853466211184 -1 0.0037040710449218 1 Carbamidomethyl (C) _EHYRRAC(Carbamidomethyl (C))RRCR_ ENST00000585553.5_1_17:43213984-43221005:+|nuORF;nc|ENSG00000181513|Q8NC06-3|ACBD4;nc|ENSG00000181513|Q8NC06|ACBD4 0.925533008218175 0.8707812104363729 3 [AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CP]|[EA]}G{I|L}GSGGS{I|L}R{[CA]|SS} 17 -1 [AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CP]|[EA]}G{I|L} + + 42.186 -7.7148 -1.0213 2.7012 2.7012 49.652 0.0 0.0 0.0 0.0 16.589483807596515 0.0 0.0 0 1.1237125054200234 0.0 1.2689301784845295 0.0 [AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CP]|[EA]}G{I|L}GSGGS{I|L}R{[CA]|SS} 2.7012 - 965 + 1 2.344 183190.9 1.0 1375 4973 6349 HBL1_DMSO_200M_050219_1,6350 HBL1_DMSO_200M_050219_1,6350,EHYRRACRRCR False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 6351 32.844 800.0 126420.0 25 0 18389.0 -1 0 51 1146.803657247623 3437.3891423430696 3 1147.470385730267 MULTI CID FTMS 0 0 0 6349 149239.96875 0.1475690444595841 -4 0.0680313110351562 2 3 {M(Oxidation (M))|F}G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]Y 5 -1 9.8329 0.0 0.0 0.28606 0.0 0.0 1108.4074051377945 1651.7474864037854 2760.15489154158 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]Y 0.28606 - 100 + 1 2.344 84251.5 0.6600000262260437 1376 4973 6349 HBL1_DMSO_200M_050219_1,6351 HBL1_DMSO_200M_050219_1,6351, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6352 32.858 800.0 100070.0 25 0 4834.5 + 37969 TMSTNGIPR 9 126 496.74589129120096 991.477229649202 2 496.7458679080009 MULTI CID FTMS 0 0 0 6349 95298.5234375 1.0 0 0.0 3 Oxidation (M) _TM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 62.57269311338072 0.0246576765497938 3 [{M(Oxidation (M))|F}T]STNG{I|L}PR 9 0 + 64.473 0.0 0.0 6.5027 6.5027 80.497 0.0 0.0 0.0 7.147642715192504 1.8563657696191167 1.8563657696191167 1.8563657696191167 0 0.805462187404089 0.0 0.4247425010840047 0.6307196863200843 + + [{M(Oxidation (M))|F}T]STNG{I|L}PR;[{M(Oxidation (M))|F}T]STNG{I|L}RP;[{M(Oxidation (M))|F}T]STGGG{I|L}PR;[{M(Oxidation (M))|F}T]STGGG{I|L}RP;[VG]SVVNTS{[ET]|[MV]};[{M(Oxidation (M))|F}T]STNGR{I|L}P;[VG]SP[KS]TS{[ET]|[MV]};[{M(Oxidation (M))|F}T]STGGGR{I|L}P;[PS][VG][KS]TS{[ET]|[MV]};[VG]SVVGGTS{[ET]|[MV]} 6.5027;6.3155;5.574;5.3867;5.3812;5.2824;4.774;4.3537;4.3251;4.1488 +;-;-;-;-;-;-;-;-;- + 565 + 1 2.344 64399.9 0.8299999833106995 1377 4973 6349 HBL1_DMSO_200M_050219_1,6352 HBL1_DMSO_200M_050219_1,6352,TMSTNGIPR True False TMSTNGIPR 32.857588 496.745867908001 850002.3125 6349.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 8.882831573486328 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6353 32.871 800.0 182400.0 25 0 80825.0 + 25646 NFSHGTHEY 9 46 1091.453064079486 1090.445787612886 1 1091.447436511517 MULTI CID FTMS 0 0 0 6349 80440.75 0.5450882995721527 -1 0.0037040710449218 4 Unmodified _NFSHGTHEY_ ENSG00000067225|ENST00000335181|PKM;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;ENST00000564276.1_1_15:72502555-72511438:-|nuORF;nc|ENSG00000067225|P14618-2|PKM 83.42873516780209 0.0166860047644719 3 N{M(Oxidation (M))|F}SHGTHEY 9 0 + 63.058 0.0 0.0 5.7827 5.7827 89.324 0.0 0.0 0.0 40.8391254042489 0.7627438813295129 0.7627438813295129 15.511525224473814 0 2.3494850021680094 0.0 0.0 0.0 + + N{M(Oxidation (M))|F}SHGTHEY;Y{[QG]|[NA]}HGTHEY;N{M(Oxidation (M))|F}SHG[Y{M(Oxidation (M))|F}]GY;N{[NV]|[RG]}{[SA]|[TG]}GTHEY;[TP]E{[SA]|[TG]}GTHEY;[QA]Q{[SA]|[TG]}GTHEY;N[DV][DV]THEY;N{[NV]|[RG]}{[QS]|[NT]}THEY;Y{[QG]|[NA]}HG[Y{M(Oxidation (M))|F}]GY;[QA]E[DV]THEY 5.7827;4.3602;4.0433;3.1299;2.6923;2.5778;2.5518;2.3484;2.1623;1.9997 +;-;-;-;-;-;-;-;-;- + 219 + 1 2.344 101720.5 0.5699999928474426 1378 4973 6349 HBL1_DMSO_200M_050219_1,6353 HBL1_DMSO_200M_050219_1,6353,NFSHGTHEY True True NFSHGTHEY 32.871452 1091.44743651152 16454416.9375 6349.0 ENSG00000067225|ENST00000335181|PKM;;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;;ENST00000564276.1_1_15:72502555-72511438:-|nuORF;;nc|ENSG00000067225|P14618-2|PKM 9.743889490763346 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6355 32.887 800.0 105780.0 25 0 13244.0 -1 0 67 665.9947255860413 1994.962347358324 3 666.3270141482353 MULTI CID FTMS 0 0 0 6354 52677.14453125 0.7501705293469018 1 -0.0253982543945312 1 3 H 1 -1 13.495 0.0 0.0 0.67645 0.0 0.0 1839.892078658908 0.0 1839.892078658908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.67645 - 5 + 1 2.344 69503.4 0.4699999988079071 1379 4974 6354 HBL1_DMSO_200M_050219_1,6355 HBL1_DMSO_200M_050219_1,6355, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6356 32.89 152.0 588220.0 25 0 53062.0 + 24138 LYQENKREY 9 86 414.8754267724861 1241.6044509176584 3 414.8752014040947 MULTI CID FTMS 0 0 0 6354 411545.375 0.6230923567279789 -3 0.0756301879882812 2 Unmodified _LYQENKREY_ ENSG00000077721|ENST00000371558|UBE2A;ENSG00000119048|ENST00000265339|UBE2B;ENST00000499038.2_1_5:133721305-133726041:+|nuORF;ENST00000503080.1_1_5:133723966-133726041:+|nuORF;nc|ENSG00000077721|P49459-2|UBE2A;nc|ENSG00000077721|P49459-3|UBE2A 29.84058131909904 0.1515068451768857 3 {I|L}YQENK{[RE]|[WV]}Y 9 0 + 68.81 0.0 0.0 5.542 5.542 86.264 0.0 0.0 0.0 43.06769359774201 5.942124970647029 5.942124970647029 9.208187539523747 0 0.0 1.6989700043360187 0.4247425010840047 0.5 + + {I|L}YQENK{[RE]|[WV]}Y;{I|L}YQEGGK{[RE]|[WV]}Y;{I|L}Y[AG]ENK{[RE]|[WV]}Y;{I|L}YQE[RK]{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{I|L}YQE[VS][Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]};[HS]{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[HS]{[QN]|[E{I|L}]|[KN]}[YR]Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[HS]A[Y{M(Oxidation (M))|F}][{I|L}T]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[RH]Y[YR]{[RE]|[WV]}Y;[YQ][WQ][{I|L}T]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.542;4.8004;4.8004;4.0318;3.2902;1.7954;1.7075;1.6707;0.92072;0.71918 +;-;-;-;-;-;-;-;-;- + 376 + 1 2.344 76088.7 1.0 1380 4974 6354 HBL1_DMSO_200M_050219_1,6356 HBL1_DMSO_200M_050219_1,6356,LYQENKREY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6357 32.894 159.0 436700.0 25 0 96410.0 + 5012 DGVPSKNTV 9 91 458.7402758422632 915.4659987513264 2 458.7405883669853 MULTI CID FTMS 0 0 0 6354 375760.21875 0.2498871132829843 -6 0.1351509094238281 3 Unmodified _DGVPSKNTV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000510321.1_1_4:146044588-146044753:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 21.53697664764585 0.2571576504437394 3 GSPNTV[RD] 8 6 31.459 0.0 0.0 3.4364 0.0 0.0 71.07428176093906 0.0 71.07428176093906 0.0 10.729054065715395 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 GSPNTV[RD] 3.4364 - 326 1 2.344 56500.1 1.0 1381 4974 6354 HBL1_DMSO_200M_050219_1,6357 HBL1_DMSO_200M_050219_1,6357,DGVPSKNTV False True DGVPSKNTV 32.893569 458.740588366985 60979028.0 6354.0 ENST00000510321.1_1_4:146044588-146044753:+|nuORF;;ENST00000515678.5_1_4:146042303-146044753:+|nuORF;;ENSG00000164163|ENST00000296577|ABCE1 7.120028336842855 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6358 32.897 166.0 426110.0 25 0 35137.0 + 28333 PSAHCPASTV 10 98 485.2264895871047 968.4384262410094 2 485.2259704470634 MULTI CID FTMS 0 0 0 6354 315349.96875 0.188380218193418 -6 0.1351509094238281 4 Unmodified _PSAHCPASTV_ REV__ENST00000295404.9_1_19:50194996-50204826:+|nuORF 34.40172386719151 0.2166836008404837 3 SPA{M(Oxidation (M))|F}PHNS{I|L} 9 -1 + 79.58 0.0 0.0 8.2174 8.2174 97.185 0.0 0.0 0.0 51.77198607445348 14.136890462689138 14.136890462689138 34.30909368620867 0 2.242992819099939 2.0 0.3054621874040891 0.805462187404089 SPA{M(Oxidation (M))|F}PHNS{I|L};SP[WE]HNS{I|L};[PS]M[HN]P{[WT]|[RM]};S[WE]PHNS{I|L};[PS][HN]MP{[WT]|[RM]};[PS][PG][NP]N{[WT]|[RM]};[PS][HN]{I|L}T[WD];[PA]{M(Oxidation (M))|F}[HN]P{[WT]|[RM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NSMP{[WT]|[RM]};S[W{M(Oxidation (M))|F}]{I|L}CNS{I|L} 8.2174;4.6746;3.9128;3.7066;2.8802;2.2819;1.7658;1.6979;1.38;1.2673 -;-;-;-;-;-;-;-;-;- 655 + 1 2.344 58660.7 1.0 1382 4974 6354 HBL1_DMSO_200M_050219_1,6358 HBL1_DMSO_200M_050219_1,6358,PSAHCPASTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6360 32.903 230.0 276910.0 25 0 19812.0 + 41534 VPNTSQSQV 9 95 480.243531253019 958.472509572838 2 480.2433959841728 MULTI CID FTMS 0 0 0 6359 360827.75 0.7228968494336369 7 -0.272857666015625 1 Unmodified _VPNTSQSQV_ ENSG00000103064|ENST00000219343|SLC7A6 34.40172386719151 0.1061884637610825 3 [AG]SPVSQ 7 7 42.015 0.0 0.0 4.3836 0.0 0.0 0.0 329.1465557009869 329.1465557009869 23.225022503320226 0.0 0.0 0.0 0 0.2396518287104437 1.5228787452803376 1.424742501084005 0.0 [AG]SPVSQ 4.3836 - 694 1 2.344 55707.6 1.0 1383 4975 6359 HBL1_DMSO_200M_050219_1,6360 HBL1_DMSO_200M_050219_1,6360,VPNTSQSQV True True VPNTSQSQV 32.903304 480.243395984173 15823008.0 6359.0 ENSG00000103064|ENST00000219343|SLC7A6 3.4565338691075644 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6361 32.917 800.0 134930.0 25 0 18559.0 + -1 AYGGGGGGSSY 11 68 931.9284110304822 1861.842269127764 2 931.9286987185478 MULTI CID FTMS 0 0 0 6359 138202.03125 0.2574387733278629 6 -0.2154273986816406 2 ENSG00000177733|ENST00000314940|HNRNPA0 3 SS{M(Oxidation (M))|F} 3 -1 18.5 0.0 0.0 0.99364 0.0 0.0 1129.558713074833 408.1280916803344 1537.6868047551673 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 SS{M(Oxidation (M))|F} 0.99364 - 51 + 1 2.344 75972.0 0.6700000166893005 1384 4975 6359 HBL1_DMSO_200M_050219_1,6361 HBL1_DMSO_200M_050219_1,6361, False False AYGGGGGGSSY 32.917154 931.928698718548 505960.875 6359.0 ENSG00000177733|ENST00000314940|HNRNPA0 1.4109040300051372 1.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6363 32.928 408.0 280490.0 25 0 86661.0 -1 0 125 488.2675942413938 487.2603177747938 1 488.2671691775322 MULTI CID FTMS 0 0 0 6362 248827.640625 0.9421255719467648 -16 0.4630165100097656 1 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}Q 4 -1 {NN|[MP]|[D{I|L}]|[EV]} + + 18.183 13.468 5.9042 3.7316 3.7316 51.812 0.0 0.0 0.0 0.0 2.19682627395736 0.0 0.0 0 0.5 0.0 0.0 0.3261295808774506 {NN|[MP]|[D{I|L}]|[EV]}{I|L}Q 3.7316 - 98 + 1 2.344 93111.7 1.0 1385 4976 6362 HBL1_DMSO_200M_050219_1,6363 HBL1_DMSO_200M_050219_1,6363, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6364 32.931 148.0 475680.0 25 0 34934.0 19656 LGHGALAEK 9 100 448.2532646997575 894.491976466315 2 448.2531616091728 MULTI CID FTMS 0 0 0 6362 323766.78125 0.4513203092063438 3 -0.1135215759277343 2 Unmodified _LGHGALAEK_ ENSG00000138035|ENST00000447944|PNPT1;ENST00000260604.8_1_2:55870335-55906871:-|nuORF 21.74664581756881 0.2544899275067181 3 TAEK 4 6 38.047 0.0 0.0 4.2535 0.0 0.0 447.26591569755385 0.0 447.26591569755385 0.0 29.55259398656281 0.0 0.0 0 1.1505149978319906 0.0 0.0 0.0 TAEK 4.2535 - 64 1 2.344 59875.4 1.0 1386 4976 6362 HBL1_DMSO_200M_050219_1,6364 HBL1_DMSO_200M_050219_1,6364,LGHGALAEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6365 32.937 365.0 179160.0 25 0 10640.0 + 18515 KYQEQHSVM 9 96 575.2713579023113 1148.5281628714224 2 575.2708618044853 MULTI CID FTMS 0 0 0 6362 185436.96875 0.99548532523097 -1 0.0204429626464843 3 Unmodified _KYQEQHSVM_ ENSG00000162735|ENST00000368072|PEX19 43.77239144664712 0.0547478964384323 3 HSVM 4 5 38.849 0.0 0.0 3.3825 0.0 0.0 676.3187733380875 0.0 676.3187733380875 0.0 17.42250212855963 0.0 0.0 0 0.7134679910804405 0.0 0.8807196863200843 0.0 + HSVM 3.3825 + + 434 1 2.344 54765.4 1.0 1387 4976 6362 HBL1_DMSO_200M_050219_1,6365 HBL1_DMSO_200M_050219_1,6365,KYQEQHSVM True True KYQEQHSVM 32.937094 575.270861804485 830725.9375 6362.0 ENSG00000162735|ENST00000368072|PEX19 6.345223744710286 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6366 32.951 800.0 203620.0 25 0 79750.0 8195 EPSMLLVKV 9 146 508.2971417069225 1014.579730480645 2 508.2942382693291 MULTI CID FTMS 0 0 0 6362 140654.984375 0.149444874200549 -18 0.4865379333496094 4 Unmodified _EPSMLLVKV_ nc|ENSG00000105737|Q16478-2|GRIK5 4.3292370932331545 0.7635526921153418 3 [EP][PG]QG{M(Oxidation (M))|F}A 8 7 22.794 0.0 0.0 2.2467 0.0 0.0 0.0 228.2158748500388 228.2158748500388 12.61313417261504 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5610312860818771 0.3494850021680094 [EP][PG]QG{M(Oxidation (M))|F}A 2.2467 - 473 1 2.344 128913.8 0.6399999856948853 1388 4976 6362 HBL1_DMSO_200M_050219_1,6366 HBL1_DMSO_200M_050219_1,6366,EPSMLLVKV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6367 32.965 800.0 167580.0 25 0 12066.0 + 24139 LYQENKREY 9 89 621.8091730708159 1241.6037932084316 2 621.8093139529228 MULTI CID FTMS 0 0 0 6362 131960.515625 0.8636525907870968 -1 0.0204429626464843 5 Unmodified _LYQENKREY_ ENSG00000077721|ENST00000371558|UBE2A;ENSG00000119048|ENST00000265339|UBE2B;ENST00000499038.2_1_5:133721305-133726041:+|nuORF;ENST00000503080.1_1_5:133723966-133726041:+|nuORF;nc|ENSG00000077721|P49459-2|UBE2A;nc|ENSG00000077721|P49459-3|UBE2A 66.45667989310934 0.0225072657982126 3 {I|L}YQENK{[RE]|[WV]}Y 9 0 + 90.455 0.0 0.0 7.2854 7.2854 88.678 0.0 0.0 0.0 73.8173657553704 4.973024840566467 4.973024840566467 6.505149978319906 0 0.9247425010840048 2.0 0.805462187404089 1.1549471895720984 + + {I|L}YQENK{[RE]|[WV]}Y;Y{I|L}QENK{[RE]|[WV]}Y;{I|L}YQEGGK{[RE]|[WV]}Y;{I|L}Y[AG]ENK{[RE]|[WV]}Y;Y{I|L}QEGGK{[RE]|[WV]}Y;Y{I|L}[AG]ENK{[RE]|[WV]}Y;{I|L}YQC(Carbamidomethyl (C))[{I|L}V]{[{M(Oxidation (M))|F}H]|[RQ]}Y;Y{I|L}QC(Carbamidomethyl (C))[{I|L}V]{[{M(Oxidation (M))|F}H]|[RQ]}Y;[RH]Y[YR]{[RE]|[WV]}Y 7.2854;6.7614;6.5437;6.5437;6.0198;6.0198;5.4695;4.9456;0.19079 +;-;-;-;-;-;-;-;- + 225 + 1 2.344 101776.9 0.6000000238418579 1389 4976 6362 HBL1_DMSO_200M_050219_1,6367 HBL1_DMSO_200M_050219_1,6367,LYQENKREY True True LYQENKREY 32.964745 621.809313952923 4144185.125 6362.0 nc|ENSG00000077721|P49459-2|UBE2A;;nc|ENSG00000077721|P49459-3|UBE2A;;ENSG00000119048|ENST00000265339|UBE2B;;ENSG00000077721|ENST00000371558|UBE2A;;ENST00000499038.2_1_5:133721305-133726041:+|nuORF;;ENST00000503080.1_1_5:133723966-133726041:+|nuORF 6.661826928456624 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6368 32.979 800.0 166960.0 25 0 13900.0 + -1 ASAFMMWI 8 130 494.7155039129948 987.4164548927896 2 494.7164489626884 MULTI CID FTMS 0 0 0 6362 95872.265625 0.9312778966361333 -1 0.0204429626464843 6 2 Oxidation (M) _ASAFM(Oxidation (M))M(Oxidation (M))WI_ REV__ENSG00000004939|ENST00000262418|SLC4A1;REV__nc|ENSG00000004939|P02730-2|SLC4A1 14.581692164780916 0.6954967302934248 3 {[SA]|[TG]}G{[YD]|[{M(Oxidation (M))|F}M]}APPNP 10 -1 + 42.477 0.0 0.0 4.3018 4.3018 85.231 0.0 0.0 0.0 15.526296416230714 18.03978399594748 15.526296416230714 22.27243781503062 0 0.8831596456423734 1.6989700043360187 0.0 0.0 {[SA]|[TG]}G{[YD]|[{M(Oxidation (M))|F}M]}APPNP;{[SA]|[TG]}G{[YD]|[{M(Oxidation (M))|F}M]}[HQ]NP;{[QS]|[NT]}{[YD]|[{M(Oxidation (M))|F}M]}APPNP;[QT]PPA[EC]{[QD]|[EN]|[WG]|[KD]|[RS]};{[MS]|[{M(Oxidation (M))|F}A]}Y{[YD]|[{M(Oxidation (M))|F}M]}VNP;[QT]V{[YD]|[{M(Oxidation (M))|F}M]}YCP 4.3018;2.0462;1.9196;1.5767;0.2405;0.11416 -;-;-;-;-;- 237 1 2.344 104793.5 0.5400000214576721 1390 4976 6362 HBL1_DMSO_200M_050219_1,6368 HBL1_DMSO_200M_050219_1,6368,ASAFMMWI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6370 32.983 84.0 550570.0 25 0 31908.0 23148 LSPVAIEQTSL 11 70 386.5512237838781 1156.6318419518343 3 386.5509216189384 MULTI CID FTMS 0 0 0 6369 472280.3125 0.1633127812188351 4 -0.1336212158203125 1 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 27.22323531849824 0.4529927607131788 3 QTS{I|L} 4 7 48.404 0.0 0.0 4.1849 0.0 0.0 709.3980699854197 0.0 709.3980699854197 0.0 37.1669877129645 0.0 0.0 0 1.424742501084005 0.0 1.0 0.0 + QTS{I|L} 4.1849 + + 38 1 2.344 43526.9 1.0 1391 4977 6369 HBL1_DMSO_200M_050219_1,6370 HBL1_DMSO_200M_050219_1,6370,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6371 32.984 55.0 897080.0 25 0 94389.0 + 2789 TATPTIMK 8 82 439.73645049689657 877.4583480605932 2 439.7363464236259 MULTI CID FTMS 0 0 0 6369 1160518.375 0.8256196095247462 2 -0.0521583557128906 2 Unmodified _ATTLPAAYA_ ENSG00000020577|ENST00000554335|SAMD4A;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 23.1484247019978 0.2366544122328345 3 [TA]TP{I|L}T{M(Oxidation (M))|F}K 8 5 + 64.563 0.0 0.0 7.3579 7.3579 96.245 0.0 0.0 0.0 46.70941280735775 11.638568026386691 11.638568026386691 64.56276287873237 0 1.0 1.6989700043360187 0.5 0.0 [TA]TP{I|L}T{M(Oxidation (M))|F}K 7.3579 - 89 + 1 2.344 45437.6 1.0 1392 4977 6369 HBL1_DMSO_200M_050219_1,6371 HBL1_DMSO_200M_050219_1,6371,ATTLPAAYA False False TATPTIMK 32.984439 439.736346423626 30685054.0 6369.0 ENSG00000020577|ENST00000554335|SAMD4A;;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 3.3791555563608804 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6372 32.986 93.0 745720.0 25 0 102890.0 + -1 IQRLETMK 8 93 517.7865055958047 1033.5584582584092 2 517.7868530154228 MULTI CID FTMS 0 0 0 6369 745223.875 0.0030606848609215 131 -5.3638458251953125 3 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 KTT[{I|L}P][WP]K 8 -1 50.868 0.0 0.0 4.9217 0.0 0.0 63.99737568734731 0.0 63.99737568734731 0.0 34.89430170129209 0.0 0.0 0 1.6861818737241734 0.0 1.3494850021680094 0.2887254899964357 KTT[{I|L}P][WP]K 4.9217 - 191 + 1 2.344 61322.4 1.0 1393 4977 6369 HBL1_DMSO_200M_050219_1,6372 HBL1_DMSO_200M_050219_1,6372,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6373 32.988 57.0 1337100.0 25 0 205270.0 + 25022 MPQPPPLPHPV 11 75 403.8879066811003 1208.6418906435008 3 403.8876525759697 MULTI CID FTMS 0 0 0 6369 586672.125 0.0817829224488339 22 -0.728179931640625 4 Unmodified _MPQPPPLPHPV_ REV__ENST00000462256.5_1_6:31498213-31500844:-|nuORF;REV__ENST00000481456.1_1_6:31500550-31500844:-|nuORF 13.042465956692816 0.7638483625850725 3 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 -1 33.473 0.0 0.0 2.7695 0.0 0.0 0.0 394.2209603050952 394.2209603050952 20.26847721998322 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 2.7695 - 162 + 1 2.344 62780.0 1.0 1394 4977 6369 HBL1_DMSO_200M_050219_1,6373 HBL1_DMSO_200M_050219_1,6373,MPQPPPLPHPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6374 32.99 73.0 960010.0 25 0 172360.0 + 19508 LFLQVLAVE 9 93 344.5415907961679 0 344.5413696169853 PEAK CID FTMS 0 0 0 6369 569038.5625 0.969265176664393 1 -0.0411148071289062 5 Unmodified _LFLQVLAVE_ REV__ENSG00000110719|ENST00000265686|TCIRG1;REV__ENST00000533947.1_1_11:67808738-67810499:+|nuORF 10.073929032068715 0.3114232490637051 3 P 1 -1 3.4949 0.0 0.0 0.50866 0.0 0.0 342.8953631335483 244.0964296930297 586.991792826578 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.50866 - 1 + 1 2.344 61599.3 1.0 1395 4977 6369 HBL1_DMSO_200M_050219_1,6374 HBL1_DMSO_200M_050219_1,6374,LFLQVLAVE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6375 32.994 235.0 346230.0 25 0 96626.0 31476 RPWLWRML 8 75 579.3230347797295 1156.6315166262589 2 579.3229247927666 MULTI CID FTMS 0 0 0 6369 395803.21875 0.2014390810778073 5 -0.1910514831542968 6 Unmodified _RPWLWRML_ ENST00000541110.5_2_6:42330765-42418997:-|nuORF 12.531546534597751 0.7257836412119636 3 [VG]P 3 8 19.537 0.0 0.0 1.6892 0.0 0.0 0.0 900.4497164361936 900.4497164361936 1.5786286697077436 0.0 0.0 0.0 0 0.3807196863200844 1.154901959985743 0.0 0.0 [VG]P 1.6892 - 45 + 1 2.344 66855.2 1.0 1396 4977 6369 HBL1_DMSO_200M_050219_1,6375 HBL1_DMSO_200M_050219_1,6375,RPWLWRML False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6376 32.997 122.0 493270.0 25 0 59509.0 + 16618 KEFYQFPRYWW 11 63 550.6030358702153 1648.7872782108457 3 550.6032592654228 MULTI CID FTMS 0 0 0 6369 392932.78125 0.8151353404115815 -2 0.0818061828613281 7 Unmodified _KEFYQFPRYWW_ REV__ENSG00000198964|ENST00000361781|SGMS1;REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1 1.1097533296519684 0.8699120469545434 3 GSGGS{I|L}K 7 -1 38.224 0.0 0.0 2.3183 0.0 0.0 842.398190741679 217.05428491763908 1059.452475659318 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 GSGGS{I|L}K 2.3183 - 267 + 1 2.344 52962.9 1.0 1397 4977 6369 HBL1_DMSO_200M_050219_1,6376 HBL1_DMSO_200M_050219_1,6376,KEFYQFPRYWW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6377 33.01 800.0 144870.0 25 0 24180.0 -1 0 67 1133.1470834196311 3396.4194208590934 3 1133.481494128704 MULTI CID FTMS 0 0 0 6369 158649.71875 0.4458922951434911 -4 0.1630744934082031 8 3 {M(Oxidation (M))|F}G 2 -1 8.5835 0.0 0.0 0.25272 0.0 0.0 1108.393494200693 2080.928213921089 3189.321708121782 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.25272 - 62 + 1 2.344 93989.2 0.4900000095367431 1398 4977 6369 HBL1_DMSO_200M_050219_1,6377 HBL1_DMSO_200M_050219_1,6377, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6378 33.02 524.0 178360.0 25 0 17455.0 12558 GVHQSVATDGP 11 121 534.2590934377832 1066.5036339423664 2 534.2582885622978 MULTI CID FTMS 0 0 0 6369 109722.7890625 0.0122222210038742 37 -1.277587890625 9 Unmodified _GVHQSVATDGP_ ENSG00000115286|ENST00000233627|NDUFS7;ENST00000436115.6_1_19:1383907-1389591:+|nuORF;ENST00000538523.5_1_19:1387763-1393403:+|nuORF;ENST00000538662.5_1_19:1383907-1391085:+|nuORF;ENST00000545446.5_1_19:1383907-1388593:+|nuORF;nc|ENSG00000115286|O75251-2|NDUFS7 18.1463463914782 0.6576820063886638 3 {[DA]|[EG]}VSS[PA]HV{[QG]|[NA]} 11 7 + 32.175 0.0 0.0 3.0169 3.0169 70.346 0.0 0.0 0.0 0.7779983226185507 15.421954366253008 0.7779983226185507 2.0340219607612653 0 0.5 0.8538719643217619 1.1382104921644451 0.0 {[DA]|[EG]}VSS[PA]HV{[QG]|[NA]};{[DA]|[EG]}VAPSSHV{[QG]|[NA]};{[DA]|[EG]}VS[PA]SHV{[QG]|[NA]};[DP][QT]VSHV{[QG]|[NA]};[TP]SSS[PA]HV{[QG]|[NA]};[PS]TSS[PA]HV{[QG]|[NA]};[DP][Q{I|L}]SSHV{[QG]|[NA]};[TP][PA]SSSHV{[QG]|[NA]};[TP]SAPSSHV{[QG]|[NA]};[PS]TAPSSHV{[QG]|[NA]} 3.0169;2.8262;2.6929;1.9352;1.7943;1.7814;1.7701;1.7641;1.6036;1.5907 -;-;-;-;-;-;-;-;-;- 655 1 2.344 77582.5 1.0 1399 4977 6369 HBL1_DMSO_200M_050219_1,6378 HBL1_DMSO_200M_050219_1,6378,GVHQSVATDGP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6380 33.024 15.0 4284800.0 25 0 514390.0 12367 GTENMFVMY 9 95 364.48993648880855 1090.4479800666256 3 364.4896118044853 MULTI CID FTMS 0 0 0 6379 1069636.25 0.1724061300100609 4 -0.1499366760253906 1 Unmodified _GTENMFVMY_ ENSG00000053747|ENST00000313654|LAMA3;nc|ENSG00000053747|Q16787-1|LAMA3;nc|ENSG00000053747|Q16787-3|LAMA3;nc|ENSG00000053747|Q16787-4|LAMA3 7.289230182591677 0.6602208344931196 3 PKDVA{[NV]|[RG]}Y 8 7 35.36 0.0 0.0 3.2427 0.0 0.0 185.9706746299534 0.0 185.9706746299534 0.0 24.213271985608536 0.0 0.0 0 0.0 0.0 0.0 1.579689690656103 PKDVA{[NV]|[RG]}Y 3.2427 - 556 + 1 2.34 58639.7 1.0 1400 4978 6379 HBL1_DMSO_200M_050219_1,6380 HBL1_DMSO_200M_050219_1,6380,GTENMFVMY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6381 33.025 27.0 2485300.0 25 0 353700.0 25645 NFSHGTHEY 9 82 546.2307404309852 1090.4469279287705 2 546.2308227419853 MULTI CID FTMS 0 0 0 6379 655467.9375 0.161244126939652 4 -0.1499366760253906 2 Unmodified _NFSHGTHEY_ ENSG00000067225|ENST00000335181|PKM;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;ENST00000564276.1_1_15:72502555-72511438:-|nuORF;nc|ENSG00000067225|P14618-2|PKM 7.289230182591677 0.6602208344931196 3 [KP]DA[HM]KPA 9 9 25.864 0.0 0.0 2.3718 0.0 0.0 0.0 111.90893191315357 111.90893191315357 18.87394998465425 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [KP]DA[HM]KPA 2.3718 - 128 1 2.34 56799.3 1.0 1401 4978 6379 HBL1_DMSO_200M_050219_1,6381 HBL1_DMSO_200M_050219_1,6381,NFSHGTHEY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6382 33.027 9.8 4742700.0 25 0 548900.0 + 4202 DAPKDYRQV 9 79 364.52117959176223 1090.5417093754868 3 364.5207397341728 MULTI CID FTMS 0 0 0 6379 3525408.75 0.1635886069964001 -4 0.1483192443847656 3 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 16.149105407346934 0.3995459350917656 3 {[DA]|[EG]}PKDY 6 3 48.438 0.0 0.0 4.4417 0.0 0.0 0.0 398.21698938541255 398.21698938541255 35.22619763980661 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[DA]|[EG]}PKDY 4.4417 + + 53 + 1 2.34 44668.5 1.0 1402 4978 6379 HBL1_DMSO_200M_050219_1,6382 HBL1_DMSO_200M_050219_1,6382,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6383 33.028 17.0 2687900.0 25 0 348470.0 + 4207 DAPKDYRQV 9 56 546.2774609261191 1090.5403689190382 2 546.2776977419853 MULTI CID FTMS 0 0 0 6379 2118122.75 0.1510222537431812 -5 0.2041893005371093 4 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 18.373094154950223 0.3393451798331396 3 DAPKD 5 4 61.256 0.0 0.0 5.617 0.0 0.0 0.0 561.2786455506214 561.2786455506214 50.28659694992122 0.0 0.0 0.0 0 0.6307196863200843 1.6989700043360187 0.0 0.0 + DAPKD 5.617 + + 27 + 1 2.34 44939.8 1.0 1403 4978 6379 HBL1_DMSO_200M_050219_1,6383 HBL1_DMSO_200M_050219_1,6383,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6384 33.031 155.0 309330.0 25 0 46426.0 + -1 SQAPSTMQV 9 79 482.7239940725484 963.4334352118968 2 482.7240478396416 MULTI CID FTMS 0 0 0 6379 422164.46875 0.8776678074155346 -1 0.0411148071289062 5 Oxidation (M) _SQAPSTM(Oxidation (M))QV_ ENSG00000112658|ENST00000265354|SRF 39.94969957227396 0.0757326808254658 3 {[QS]|[NT]}A{[RE]|[WV]}{M(Oxidation (M))|F}QV 8 -1 {[QS]|[NT]} + + 33.633 17.69 8.2243 3.4909 3.4909 51.22 0.0 0.0 0.0 0.0 29.151851506881687 0.0 0.0 0 1.0 0.0 0.0 1.1237125054200234 {[QS]|[NT]}A{[RE]|[WV]}{M(Oxidation (M))|F}QV 3.4909 - 156 + 1 2.34 43539.5 1.0 1404 4978 6379 HBL1_DMSO_200M_050219_1,6384 HBL1_DMSO_200M_050219_1,6384,SQAPSTMQV False False SQAPSTMQV 33.030755 482.724047839642 8999405.0 6379.0 ENSG00000112658|ENST00000265354|SRF 7.879029273986816 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6386 33.035 11.0 3919900.0 25 0 385260.0 + 35508 STMSTNGIPR 10 67 540.2612777208125 1078.5080025084249 2 540.2613403201103 MULTI CID FTMS 0 0 0 6385 5475405.0 0.6694451168966453 -4 0.1339645385742187 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 61.60191391372663 0.0323840705564037 3 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR 10 0 + 77.484 0.0 0.0 7.1844 7.1844 80.399 0.0 0.0 0.0 7.269987279362624 0.6694678963061307 0.6694678963061307 0.6694678963061307 0 0.8807196863200843 0.0 0.4247425010840047 0.805462187404089 + + {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}H[KC][HN]PR;{[MG]|[TS]}[Q{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}S[WM];{[MG]|[TS]}H[KC][HN]RP;{[MG]|[TS]}[Q{I|L}][WK][WM];AA{[WT]|[RM]}{[QV]|[N{I|L}]|[RA]|[KV]}S[WM];[HD]T{[QV]|[N{I|L}]|[RA]|[KV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HV] 7.1844;7.1223;6.3347;6.2726;1.7227;1.6854;1.6606;1.0847;0.43172;0.11131 +;-;-;-;-;-;-;-;-;- + 183 + 1 2.34 40621.9 1.0 1405 4979 6385 HBL1_DMSO_200M_050219_1,6386 HBL1_DMSO_200M_050219_1,6386,STMSTNGIPR True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6387 33.041 328.0 197930.0 25 0 18467.0 + 36401 SYSHSSSSL 9 92 477.7120428332252 953.4095327332504 2 477.7123901247978 MULTI CID FTMS 0 0 0 6385 147500.4375 0.2055925001472247 -3 0.1135215759277343 2 Unmodified _SYSHSSSSL_ ENSG00000139641|ENST00000394048|ESYT1;ENST00000548142.1_1_12:56532791-56536718:+|nuORF;nc|ENSG00000139641|Q9BSJ8-2|ESYT1 48.345845343767074 0.0439967357579942 3 DSYSS{[WT]|[RM]} 7 6 22.666 0.0 0.0 2.3773 0.0 0.0 109.06450850654451 0.0 109.06450850654451 0.0 2.9596314896173297 0.0 0.0 0 0.0 0.0 1.064909327626439 0.0 DSYSS{[WT]|[RM]} 2.3773 - 191 1 2.34 55967.1 1.0 1406 4979 6385 HBL1_DMSO_200M_050219_1,6387 HBL1_DMSO_200M_050219_1,6387,SYSHSSSSL True True SYSHSSSSL 33.041156 477.712390124798 4001793.75 6385.0 ENSG00000139641|ENST00000394048|ESYT1;;ENST00000548142.1_1_12:56532791-56536718:+|nuORF;;nc|ENSG00000139641|Q9BSJ8-2|ESYT1 5.1330413818359375 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6388 33.055 800.0 125580.0 25 0 4835.6 + 14160 IDCYEIIEK 9 121 563.2803907747096 1124.5462286162192 2 563.2803832888603 MULTI CID FTMS 0 0 0 6385 104726.765625 0.2839811791917977 -3 0.1135215759277343 3 Unmodified _IDCYEIIEK_ ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-2|COL12A1 43.85829265575387 0.0542763391141878 3 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK 10 6 + 101.18 0.0 0.0 8.9976 8.9976 93.956 0.0 0.0 0.0 79.9758551926329 18.521825181113627 18.521825181113627 9.164539485499262 0 2.9604093769761874 1.0969100130080565 0.75 0.8494850021680094 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}QHVADAEK;{NN|[MP]|[D{I|L}]|[EV]}QHVGEAEK;{NN|[MP]|[D{I|L}]|[EV]}QHREAEK;[Q{I|L}]DHVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HVADAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HVGEAEK;{[QV]|[N{I|L}]|[RA]|[KV]}HEVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HREAEK 8.9976;8.1827;7.8015;7.7499;7.519;7.1948;6.9865;6.935;6.7671;6.7001 -;-;-;-;-;-;-;-;-;- 3389 + 1 2.34 80371.0 0.5600000023841858 1407 4979 6385 HBL1_DMSO_200M_050219_1,6388 HBL1_DMSO_200M_050219_1,6388,IDCYEIIEK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6389 33.066 621.0 425570.0 25 0 68653.0 28628 PVGSYRLN 8 152 453.2454316791142 904.4763104250284 2 453.2443420290947 MULTI CID FTMS 0 0 0 6385 94331.296875 0.2128762868233268 -6 0.2152328491210937 4 Unmodified _PVGSYRLN_ ENST00000532739.1_1_16:16465196-16470832:+|nuORF;ENST00000537112.5_1_16:16421763-16427707:+|nuORF;ENST00000541836.5_1_16:15021147-15029115:+|nuORF 29.081581746732265 0.4323690340403521 3 PKDYRQV 7 5 + 65.338 0.0 0.0 7.2238 7.2238 87.383 0.0 0.0 0.0 16.320232147054057 5.259698222574791 5.259698222574791 5.259698222574791 0 1.4343872275673926 0.0 0.0 1.1978224950233998 PKDYRQV;PKDYRN{I|L};PKDYR[AG]V;PKDYRGG{I|L};PV[SG]YRQV;VP[SG]YRQV;PKDVA{[NV]|[RG]}Y;PV[SG]YRN{I|L};VP[SG]YRN{I|L};PKVDA{[NV]|[RG]}Y 7.2238;6.6423;5.873;5.2915;5.1747;4.9244;4.7179;4.5932;4.3429;4.2532 -;-;-;-;-;-;-;-;-;- 1197 + 1 2.34 201561.9 1.0 1408 4979 6385 HBL1_DMSO_200M_050219_1,6389 HBL1_DMSO_200M_050219_1,6389,PVGSYRLN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6390 33.08 800.0 33486.0 25 0 1586.1 -1 0 57 728.3081724507148 2909.203583936459 4 728.5605956912041 MULTI CID FTMS 0 0 0 6385 75784.9453125 1.0 0 0.0 5 3 PP 2 -1 10.969 0.0 0.0 0.37705 0.0 0.0 823.121385476344 1888.954996272552 2712.0763817488955 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.37705 - 21 + 1 2.34 29531.6 0.4399999976158142 1409 4979 6385 HBL1_DMSO_200M_050219_1,6390 HBL1_DMSO_200M_050219_1,6390, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6392 33.085 142.0 405940.0 25 0 60463.0 + -1 KEMQIERL 8 62 531.7847963696964 1061.5550398061928 2 531.7845336794853 MULTI CID FTMS 0 0 0 6391 369348.53125 0.6617890661027954 -9 0.2838211059570312 1 Oxidation (M) _KEM(Oxidation (M))QIERL_ REV__ENSG00000067221|ENST00000541638|STOML1;REV__ENST00000563229.5_1_15:74280912-74281173:-|nuORF;REV__nc|ENSG00000067221|Q9UBI4-2|STOML1;REV__nc|ENSG00000067221|Q9UBI4-3|STOML1;REV__nc|ENSG00000067221|Q9UBI4-4|STOML1;REV__nc|ENSG00000067221|Q9UBI4-5|STOML1;REV__nc|ENSG00000067221|Q9UBI4-6|STOML1 18.13498045792455 0.6430038125133779 3 KTE[{I|L}P][WP]K 8 -1 27.894 0.0 0.0 2.6277 0.0 0.0 63.99865516867335 0.0 63.99865516867335 0.0 20.90462606848486 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.2215141619232908 KTE[{I|L}P][WP]K 2.6277 - 30 + 1 2.34 49106.8 1.0 1410 4980 6391 HBL1_DMSO_200M_050219_1,6392 HBL1_DMSO_200M_050219_1,6392,KEMQIERL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6393 33.098 800.0 115720.0 25 0 11720.0 17575 KPSANERVAL 10 103 542.8092605002415 1083.603968067283 2 542.8092529177666 MULTI CID FTMS 0 0 0 6391 122998.484375 0.80474336221667 -3 0.1009864807128906 2 Unmodified _KPSANERVAL_ ENSG00000184954|ENST00000327335|OR6C70 18.1463463914782 0.5430639438673815 3 KPT 3 8 39.693 0.0 0.0 3.663 0.0 0.0 0.0 754.3863945142531 754.3863945142531 27.21848749616356 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.663 - 143 + 1 2.34 77032.6 0.6100000143051147 1411 4980 6391 HBL1_DMSO_200M_050219_1,6393 HBL1_DMSO_200M_050219_1,6393,KPSANERVAL False True KPTNRVQGAL 33.098478 542.809252917767 0.0 6391.0 ENST00000359971.3_1_8:146033921-146034269:+|nuORF -0.2812593777974446 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6394 33.112 800.0 65606.0 25 0 2461.3 -1 0 88 714.9736051167364 2141.898985950409 3 715.6440307497978 MULTI CID FTMS 0 0 0 6391 82713.6875 0.4365284709188604 -3 0.1009864807128906 3 3 [NP][Q{I|L}]MM{M(Oxidation (M))|F}TSPAS[C(Carbamidomethyl (C))S]{[QG]|[NA]}S{[WN]|[YH]} 19 -1 [NP][Q{I|L}]MM{M(Oxidation (M))|F}TSP + + 31.589 0.80329 0.070065 1.4748 1.4748 48.513 0.0 0.0 0.0 0.0 24.59954981438067 0.0 0.0 0 0.3494850021680094 0.0 1.274227503252014 0.7614393726401688 [NP][Q{I|L}]MM{M(Oxidation (M))|F}TSPAS[C(Carbamidomethyl (C))S]{[QG]|[NA]}S{[WN]|[YH]} 1.4748 - 343 + 1 2.34 46316.8 0.4600000083446502 1412 4980 6391 HBL1_DMSO_200M_050219_1,6394 HBL1_DMSO_200M_050219_1,6394, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6396 33.128 800.0 200420.0 25 0 27561.0 -1 0 58 1146.803657247623 3437.3891423430696 3 1147.137377917767 MULTI CID FTMS 0 0 0 6395 418345.5625 0.3558160887180927 4 -0.1492424011230468 1 3 YG 2 -1 8.5835 0.0 0.0 0.24971 0.0 0.0 1781.604060411232 1432.6736014331598 3214.277661844392 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.24971 - 61 + 1 2.34 124273.4 0.9900000095367432 1413 4981 6395 HBL1_DMSO_200M_050219_1,6396 HBL1_DMSO_200M_050219_1,6396, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6397 33.142 800.0 93647.0 25 0 8970.2 -1 0 58 1071.9568817369498 2141.8992105407 2 1071.957446277142 MULTI CID FTMS 0 0 0 6395 93263.7734375 0.6509776200597136 -4 0.1336212158203125 2 3 ASQG 4 -1 48.488 0.0 0.0 2.2638 0.0 0.0 1146.5033662875178 649.2223420682541 1795.725708355772 0.0 0.0 0.0 0.0 0 1.805462187404089 0.0 0.8494850021680094 0.0 ASQG 2.2638 - 165 + 1 2.34 56325.0 0.4000000059604645 1414 4981 6395 HBL1_DMSO_200M_050219_1,6397 HBL1_DMSO_200M_050219_1,6397, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6398 33.156 800.0 173490.0 25 0 11422.0 + 34662 SPQLCAPQ 8 160 422.206492915037 842.398432896874 2 422.7122070193291 MULTI CID FTMS 0 0 0 6395 92382.4453125 1.0 0 0.0 3 Unmodified _SPQLCAPQ_ REV__ENST00000373109.6_1_10:73819305-73819494:-|nuORF 9.347437153973935 0.7675937258251505 3 Q 1 -1 13.725 0.0 0.0 1.6292 0.0 0.0 696.3289729132788 0.0 696.3289729132788 0.0 3.2401602713928934 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 Q 1.6292 + + 189 + 1 2.34 115095.0 0.4699999988079071 1415 4981 6395 HBL1_DMSO_200M_050219_1,6398 HBL1_DMSO_200M_050219_1,6398,SPQLCAPQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6399 33.17 800.0 115510.0 25 0 6140.4 + + 39108 NRKDIENQYETQ 12 137 513.2461620631382 1536.7166567896145 3 513.2460204958916 MULTI CID FTMS 0 0 0 6395 74219.0 0.3895178875441865 -4 0.1336212158203125 4 Unmodified _TWQYLWHQFTQ_ ENSG00000171403|ENST00000246662|KRT9;P35527 9.243775137331635 0.8315352019864206 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}QMYE[QT] 12 -1 + 43.844 0.0 0.0 2.8531 2.8531 77.071 0.0 0.0 0.0 8.583289757260474 19.89200418235712 8.583289757260474 8.094528245333485 0 0.5 1.6989700043360187 0.0 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}QMYE[QT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[HS][{I|L}A]NQYE[QT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}QMYE[QT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[AG]MYE[QT];[QT]A[{I|L}V]{[QD]|[EN]|[WG]|[KD]|[RS]}NQYE[QT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[YN]{[QN]|[E{I|L}]|[KN]}MYE[QT];[QT]A[RD][{I|L}A]NQYE[QT];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[VP][{I|L}A]NQYE[QT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}[HK][HT]YE[QT];[QT][WR][{I|L}A]NQYE[QT] 2.8531;2.3264;2.1198;2.0133;1.8174;1.7796;1.7536;1.6324;1.6214;1.5172 -;-;-;-;-;-;-;-;-;- 1930 1 2.34 73232.7 0.4900000095367431 1416 4981 6395 HBL1_DMSO_200M_050219_1,6399 HBL1_DMSO_200M_050219_1,6399,TWQYLWHQFTQ False False NRKDIENQYETQ 33.169782 513.246020495892 930563.5 6395.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 6.099256197611491 3.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6401 33.174 46.0 923780.0 25 0 68709.0 8802 EWSPSHNL 8 83 485.2264895871047 968.4384262410094 2 485.2266113162041 MULTI CID FTMS 0 0 0 6400 1297702.375 0.7752068519988294 2 -0.0757560729980468 1 Unmodified _EWSPSHNL_ ENSG00000120008|ENST00000263461|WDR11;ENST00000497136.6_1_10:122626245-122665534:+|nuORF;ENST00000604509.5_1_10:122640390-122648742:+|nuORF 25.399314129420983 0.5099049743284904 3 SPA{M(Oxidation (M))|F}PHNS{I|L} 9 6 + 69.65 0.0 0.0 7.1919 7.1919 91.293 0.0 0.0 0.0 32.90797682524175 20.83722627303833 20.83722627303833 9.208187539523747 0 2.1237125054200234 2.0 0.6307196863200843 0.0 SPA{M(Oxidation (M))|F}PHNS{I|L};SPA{M(Oxidation (M))|F}PHGGS{I|L};SP[WE]HNS{I|L};SP[WE]HGGS{I|L};S[WE]PHNS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{[TV]|[{I|L}S]}DSS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[WE]SS{I|L};S[WE]PHGGS{I|L};[HN]P[WE]SS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GG{[TV]|[{I|L}S]}DSS{I|L} 7.1919;6.2411;5.3304;4.374;3.9238;3.2808;3.1045;2.9674;2.4828;2.33 -;-;-;-;-;-;-;-;-;- 270 + 1 2.329 37104.9 1.0 1417 4982 6400 HBL1_DMSO_200M_050219_1,6401 HBL1_DMSO_200M_050219_1,6401,EWSPSHNL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6402 33.176 58.0 907100.0 25 0 207930.0 + 5013 DGVPSKNTV 9 71 458.7402758422632 915.4659987513264 2 458.7404052615166 MULTI CID FTMS 0 0 0 6400 1050368.25 0.698513245360942 2 -0.0757560729980468 2 Unmodified _DGVPSKNTV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000510321.1_1_4:146044588-146044753:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 27.628801355627647 0.1796483985696185 3 GSPNTV[RD] 8 6 32.6 0.0 0.0 3.561 0.0 0.0 71.07431990791171 0.0 71.07431990791171 0.0 4.132163132559157 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 GSPNTV[RD] 3.561 - 164 1 2.329 46602.3 1.0 1418 4982 6400 HBL1_DMSO_200M_050219_1,6402 HBL1_DMSO_200M_050219_1,6402,DGVPSKNTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6403 33.18 236.0 292510.0 25 0 37065.0 + 4610 DAYTSSQKV 9 81 499.7440968702272 997.4736408072544 2 499.7436401247978 MULTI CID FTMS 0 0 0 6400 263665.0 0.2853566728428198 -3 0.1388931274414062 3 Unmodified _DAYTSSQKV_ ENSG00000169905|ENST00000609928|TOR1AIP2 36.506200033944 0.094635877243972 3 {[DA]|[EG]}YTS{[QS]|[NT]}VK 9 2 + 54.498 0.0 0.0 5.4636 5.4636 75.042 0.0 0.0 0.0 7.727562184969372 0.6366907986937775 0.6366907986937775 0.6366907986937775 0 1.1989700043360187 1.6989700043360187 0.6421590589602533 0.0 {[DA]|[EG]}YTS{[QS]|[NT]}VK;{[DA]|[EG]}YTS{[QS]|[NT]}KV;{[DA]|[EG]}YTS{[VA]|[{I|L}G]}[SG]K 5.4636;5.3997;3.6932 -;+;- + 184 + 1 2.329 58194.5 1.0 1419 4982 6400 HBL1_DMSO_200M_050219_1,6403 HBL1_DMSO_200M_050219_1,6403,DAYTSSQKV True True DAYTSSQKV 33.180292 499.743640124798 3677090.25 6400.0 ENSG00000169905|ENST00000609928|TOR1AIP2 6.681133111317952 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6404 33.186 296.0 360640.0 25 0 32018.0 -1 0 122 342.19410740149885 341.18683093489886 1 342.1940490603447 MULTI CID FTMS 0 0 0 6400 165237.1875 1.0 0 0.0 4 3 V 1 -1 12.396 0.0 0.0 3.6333 0.0 0.0 224.1072314859715 0.0 224.1072314859715 0.0 3.416802395784755 0.0 0.0 0 0.2215141619232908 0.0 0.0 0.0 V 3.6333 - 17 + 1 2.329 88129.2 1.0 1420 4982 6400 HBL1_DMSO_200M_050219_1,6404 HBL1_DMSO_200M_050219_1,6404, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6406 33.195 388.0 272600.0 25 0 22657.0 + 6149 DSYTTNKV 8 127 464.2251822778092 926.4358116224184 2 464.2259399294853 MULTI CID FTMS 0 0 0 6405 140402.921875 0.8904440483958794 -1 0.0159111022949218 1 Unmodified _DSYTTNKV_ ENSG00000078369|ENST00000378609|GNB1;ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000078369|P62873-2|GNB1;nc|ENSG00000111664|P16520-2|GNB3 43.85829265575387 0.1697421968005898 3 {[DS]|[MA]|[CV]|TT}YTTNKV 8 0 + 35.253 0.0 0.0 3.8052 3.8052 81.305 0.0 0.0 0.0 23.47025871157805 10.810935890735216 10.810935890735216 9.262137858390812 0 0.2302046884880938 0.0 0.0 0.6989700043360187 + + {[DS]|[MA]|[CV]|TT}YTTNKV;{[DS]|[MA]|[CV]|TT}YTTGGKV;{[DS]|[MA]|[CV]|TT}Y[C(Carbamidomethyl (C))R]KV;{[DS]|[MA]|[CV]|TT}{[DS]|[MA]|[CV]|TT}YNKV;{[DS]|[MA]|[CV]|TT}{[DS]|[MA]|[CV]|TT}YGGKV 3.8052;2.8055;2.1393;1.2079;0.2081 +;-;-;-;- + 157 + 1 2.329 83564.0 1.0 1421 4983 6405 HBL1_DMSO_200M_050219_1,6406 HBL1_DMSO_200M_050219_1,6406,DSYTTNKV False True DSYTTNKV 33.194709 464.2252 825073.625 6405.0 ENSG00000078369|ENST00000378609|GNB1;;nc|ENSG00000078369|P62873-2|GNB1;;ENSG00000111664|ENST00000229264|GNB3;;ENSG00000172354|ENST00000303210|GNB2;;nc|ENSG00000111664|P16520-2|GNB3 6.437259197235107 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6407 33.209 800.0 207120.0 25 0 11619.0 + -1 DACHVMNRL 9 122 558.2567076301955 1114.4988623271909 2 558.2564575076103 MULTI CID FTMS 0 0 0 6405 157526.25 1.0 0 0.0 2 Carbamidomethyl (C) _DAC(Carbamidomethyl (C))HVMNRL_ REV__ENSG00000065989|ENST00000380702|PDE4A;REV__ENSG00000184588|ENST00000341517|PDE4B;REV__ENST00000590407.1_1_19:10569976-10577573:+|nuORF;REV__nc|ENSG00000065989|P27815-2|PDE4A;REV__nc|ENSG00000065989|P27815-3|PDE4A;REV__nc|ENSG00000065989|P27815-4|PDE4A;REV__nc|ENSG00000065989|P27815-5|PDE4A;REV__nc|ENSG00000065989|P27815-6|PDE4A;REV__nc|ENSG00000065989|P27815-7|PDE4A;REV__nc|ENSG00000184588|Q07343-2|PDE4B;REV__nc|ENSG00000184588|Q07343-3|PDE4B;REV__nc|ENSG00000184588|Q07343-4|PDE4B 14.838274106304384 0.4350285940865338 3 DAPKD 5 -1 40.419 0.0 0.0 3.6266 0.0 0.0 0.0 585.2383516900999 585.2383516900999 -0.5630439902901259 0.0 -0.5630439902901259 0.0 0 0.4715141619232907 0.7695510786217261 0.7742275032520141 0.0 DAPKD 3.6266 - 556 + 1 2.329 127495.7 0.7300000190734863 1422 4983 6405 HBL1_DMSO_200M_050219_1,6407 HBL1_DMSO_200M_050219_1,6407,DACHVMNRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6408 33.218 530.0 143240.0 25 0 8542.1 + 41535 VPNTSQSQV 9 115 480.243531253019 958.472509572838 2 480.2444640994072 MULTI CID FTMS 0 0 0 6405 137961.03125 0.2763966874367077 15 -0.4505500793457031 3 Unmodified _VPNTSQSQV_ ENSG00000103064|ENST00000219343|SLC7A6 30.63653989081413 0.1413794767160703 3 [AG]SPSQVS{[QV]|[N{I|L}]|[RA]|[KV]} 10 5 + 54.504 0.0 0.0 5.6866 5.6866 84.999 0.0 0.0 0.0 9.128498242810991 5.764837301042718 5.764837301042718 7.8357551167652915 0 0.25 1.3010299956639813 1.7803695511246984 0.0 [AG]SPSQVS{[QV]|[N{I|L}]|[RA]|[KV]};[AG]SPV{[QS]|[NT]}S{[QV]|[N{I|L}]|[RA]|[KV]};{[QS]|[NT]}PSQVS{[QV]|[N{I|L}]|[RA]|[KV]};[AG]SPS[AG]VS{[QV]|[N{I|L}]|[RA]|[KV]};{[QS]|[NT]}PV{[QS]|[NT]}S{[QV]|[N{I|L}]|[RA]|[KV]};{[QS]|[NT]}PS[AG]VS{[QV]|[N{I|L}]|[RA]|[KV]};[NP]TSQVS{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}S[DP]VS{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}[NG]QVS{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}Q[NG]VS{[QV]|[N{I|L}]|[RA]|[KV]} 5.6866;4.869;4.7342;4.7304;3.9166;3.7734;3.4732;3.3877;3.194;3.0231 -;-;-;-;-;-;-;-;-;- 717 1 2.329 64355.5 1.0 1423 4983 6405 HBL1_DMSO_200M_050219_1,6408 HBL1_DMSO_200M_050219_1,6408,VPNTSQSQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6409 33.232 800.0 117100.0 25 0 17845.0 -1 0 51 870.8753190152113 3479.472170194445 4 871.3765136599541 MULTI CID FTMS 0 0 0 6405 125629.890625 0.210716614064692 -4 0.1548042297363281 4 3 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.27199 0.0 0.0 1797.6136552392452 1474.7535171713012 3272.367172410546 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.27199 - 28 + 1 2.329 83303.2 0.5400000214576721 1424 4983 6405 HBL1_DMSO_200M_050219_1,6409 HBL1_DMSO_200M_050219_1,6409, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6410 33.246 800.0 114290.0 25 0 16331.0 + -1 DLRMFCPCS 9 119 572.734254493944 1143.453956054688 2 572.7333251833916 MULTI CID FTMS 0 0 0 6405 108292.5625 1.0 0 0.0 5 Carbamidomethyl (C),Oxidation (M) _DLRM(Oxidation (M))FC(Carbamidomethyl (C))PCS_ REV__ENST00000082468.11_1_6:26410172-26413917:+|nuORF;REV__ENST00000502361.1_1_6:26410172-26411814:+|nuORF;REV__ENST00000513047.5_1_6:26410172-26412970:+|nuORF 10.823927491677226 0.5436922275383211 3 QAN 3 -1 21.304 0.0 0.0 1.8631 0.0 0.0 812.3264641433564 0.0 812.3264641433564 0.0 7.800288628859757 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 QAN 1.8631 - 60 1 2.329 71518.9 0.6100000143051147 1425 4983 6405 HBL1_DMSO_200M_050219_1,6410 HBL1_DMSO_200M_050219_1,6410,DLRMFCPCS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6412 33.251 157.0 491650.0 25 0 74475.0 -1 TATRPITKM 9 87 517.7865055958047 1033.5584582584092 2 517.7869750857353 MULTI CID FTMS 0 0 0 6411 474193.15625 0.0019475433667325 138 -6.432979583740234 1 Oxidation (M) _TATRPITKM(Oxidation (M))_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 19.361941925380144 0.3125782356748823 3 KTT[{I|L}P][WP]K 8 -1 45.868 0.0 0.0 4.4379 0.0 0.0 63.99637535532015 0.0 63.99637535532015 0.0 29.48608906175119 0.0 0.0 0 1.1861818737241734 0.0 1.3494850021680094 0.2887254899964357 KTT[{I|L}P][WP]K 4.4379 - 284 + 1 2.329 66332.8 1.0 1426 4984 6411 HBL1_DMSO_200M_050219_1,6412 HBL1_DMSO_200M_050219_1,6412,TATRPITKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6413 33.256 303.0 304670.0 25 0 34824.0 + 21797 LPNHKLKTV 9 139 350.55405955497463 1048.640349265124 3 350.5537292361259 MULTI CID FTMS 0 0 0 6411 256383.0625 1.0 0 0.0 2 Unmodified _LPNHKLKTV_ ENSG00000049618|ENST00000636930|ARID1B;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B 22.774965066869 0.2414061210083823 3 {I|L}PNHKK{I|L}TV 9 2 + 59.105 0.0 0.0 5.6363 5.6363 86.531 0.0 0.0 0.0 25.960311675904897 10.597718523607966 10.597718523607966 9.208187539523747 0 0.7429928190999391 0.8860566476931632 0.3494850021680094 0.4247425010840047 {I|L}PNHKK{I|L}TV;{I|L}PGGHKK{I|L}TV 5.6363;4.7582 -;- 153 + 1 2.329 79908.1 1.0 1427 4984 6411 HBL1_DMSO_200M_050219_1,6413 HBL1_DMSO_200M_050219_1,6413,LPNHKLKTV False True LPNHKLKTV 33.256267 350.553729236126 1241549.75 6411.0 nc|ENSG00000049618|Q8NFD5-1|ARID1B;;ENSG00000049618|ENST00000636930|ARID1B;;nc|ENSG00000049618|Q8NFD5|ARID1B;;nc|ENSG00000049618|Q8NFD5-2|ARID1B 6.007748444875081 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6414 33.257 22.0 3368900.0 25 0 465330.0 + 17662 KPTGARPSAL 10 77 499.2931404244984 996.5717279157968 2 499.2931701540947 MULTI CID FTMS 0 0 0 6411 2866151.25 0.012644209838056 -8 0.3281707763671875 3 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 26.268140514670165 0.3785003716575977 3 KPT 3 7 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3542052172163 667.3542052172163 21.73393743112328 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPT 3.9829 + + 81 + 1 2.329 63564.1 1.0 1428 4984 6411 HBL1_DMSO_200M_050219_1,6414 HBL1_DMSO_200M_050219_1,6414,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6415 33.259 73.0 1351600.0 25 0 198400.0 20991 LNREGPKAL 9 102 333.1980440440732 996.5723027324194 3 333.1977722048759 MULTI CID FTMS 0 0 0 6411 776548.0625 0.0099569065407326 -9 0.3486137390136719 4 Unmodified _LNREGPKAL_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 27.628801355627647 0.1796483985696185 3 [KP]{[SA]|[TG]}QTPR{I|L} 9 8 + 41.193 0.0 0.0 4.1335 4.1335 77.388 0.0 0.0 0.0 4.282118526775136 17.280608467395737 4.282118526775136 5.039237471316291 0 0.3807196863200844 0.0 0.3807196863200844 0.4247425010840047 [KP]{[SA]|[TG]}QTPR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SPKA{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SPAK{I|L};[TP][KG]QTPR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GVAR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GTPK{I|L};[KP]{[SA]|[TG]}[AG]TPR{I|L};[KP]{[SA]|[TG]}WPKA{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GVRA{I|L};[KP]{[SA]|[TG]}WPAK{I|L} 4.1335;3.6278;3.498;3.3133;3.2855;3.2273;3.2095;3.1491;3.1132;3.0193 -;-;-;-;-;-;-;-;-;- 548 1 2.329 84664.8 1.0 1429 4984 6411 HBL1_DMSO_200M_050219_1,6415 HBL1_DMSO_200M_050219_1,6415,LNREGPKAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6416 33.262 116.0 720950.0 25 0 138590.0 + 18246 KVIDTQQKV 9 102 529.8140597742732 1057.6135666153464 2 529.8140746951103 MULTI CID FTMS 0 0 0 6411 687537.4375 0.4089080830629978 -5 0.2146492004394531 5 Unmodified _KVIDTQQKV_ ENSG00000113068|ENST00000261813|PFDN1;ENST00000507185.1_1_5:139661015-139682658:-|nuORF 51.76506608216692 0.0364999419761865 3 KV{I|L}D[QT]Q{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 81.786 0.0 0.0 7.7331 7.7331 92.664 0.0 0.0 0.0 54.03894549174191 8.03901102397704 8.03901102397704 9.208187539523747 0 2.6747425010840047 0.9208187539523752 0.4247425010840047 0.9698565171985376 + + KV{I|L}D[QT]Q{[QV]|[N{I|L}]|[RA]|[KV]};KV{I|L}D[QT][AG]{[QV]|[N{I|L}]|[RA]|[KV]};KVVE[QT]Q{[QV]|[N{I|L}]|[RA]|[KV]};KV{I|L}D{M(Oxidation (M))|F}VQ[{I|L}P];VK{I|L}D[QT]Q{[QV]|[N{I|L}]|[RA]|[KV]};KVVE[QT][AG]{[QV]|[N{I|L}]|[RA]|[KV]};KVVE{M(Oxidation (M))|F}VQ[{I|L}P];VK{I|L}D[QT][AG]{[QV]|[N{I|L}]|[RA]|[KV]};VKVE[QT]Q{[QV]|[N{I|L}]|[RA]|[KV]};VK{I|L}D{M(Oxidation (M))|F}VQ[{I|L}P] 7.7331;6.8624;6.8092;6.7799;6.6157;5.9385;5.856;5.745;5.6918;5.6626 +;-;-;-;-;-;-;-;-;- + 655 + 1 2.329 68942.4 1.0 1430 4984 6411 HBL1_DMSO_200M_050219_1,6416 HBL1_DMSO_200M_050219_1,6416,KVIDTQQKV True True KVIDTQQKV 33.261575 529.81407469511 7908589.5 6411.0 ENSG00000113068|ENST00000261813|PFDN1;;ENST00000507185.1_1_5:139661015-139682658:-|nuORF 3.787691275278727 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6418 33.279 800.0 237200.0 25 0 33389.0 -1 0 62 1160.8312693588157 3479.4719786766464 3 1161.167529284954 MULTI CID FTMS 0 0 0 6417 275410.15625 0.5056515933794948 -4 0.1492424011230468 1 3 {M(Oxidation (M))|F}G 2 -1 8.5835 0.0 0.0 0.24669 0.0 0.0 1108.3999094401213 2163.998506654016 3272.398416094137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.24669 - 69 + 1 2.315 142100.5 0.8299999833106995 1431 4985 6417 HBL1_DMSO_200M_050219_1,6418 HBL1_DMSO_200M_050219_1,6418, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6419 33.283 231.0 478870.0 25 0 69555.0 + 24022 LVYKIGPIE 9 116 344.5415907961679 0 344.5416137576103 PEAK CID FTMS 0 0 0 6417 285594.59375 0.48646420929599 9 -0.2884445190429687 2 Unmodified _LVYKIGPIE_ REV__CON__Q1A7A4;REV__ENSG00000106804|ENST00000223642|C5 15.847184025352805 0.2451986057151378 3 T 1 -1 4.481 0.0 0.0 0.6522 0.0 0.0 257.8331988269077 325.16221033267817 582.9954091595858 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 T 0.6522 - 17 + 1 2.315 93943.4 1.0 1432 4985 6417 HBL1_DMSO_200M_050219_1,6419 HBL1_DMSO_200M_050219_1,6419,LVYKIGPIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6420 33.292 486.0 192490.0 25 0 78189.0 + 32217 RVVKDITNA 9 107 508.2971417069225 1014.579730480645 2 508.2956725955009 MULTI CID FTMS 0 0 0 6417 214253.5 0.2276427493615249 -9 0.3442268371582031 3 Unmodified _RVVKDITNA_ ENSG00000188647|ENST00000340434|PTAR1;ENST00000474925.2_1_9:72356652-72374854:-|nuORF 12.240655878213236 0.5053430591993562 3 T{[QG]|[NA]} 3 6 14.195 0.0 0.0 1.3991 0.0 0.0 710.4405836074013 0.0 710.4405836074013 0.0 7.204999916446797 0.0 0.0 0 0.5 0.0 0.0 0.3252574989159953 + T{[QG]|[NA]} 1.3991 + + 56 + 1 2.315 79398.5 1.0 1433 4985 6417 HBL1_DMSO_200M_050219_1,6420 HBL1_DMSO_200M_050219_1,6420,RVVKDITNA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6422 33.296 3.3 14197000.0 25 0 2291100.0 + 4203 DAPKDYRQV 9 58 364.52117959176223 1090.5417093754868 3 364.5210754275322 MULTI CID FTMS 0 0 0 6421 15878066.0 0.73678568442224 4 -0.1096534729003906 1 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 41.8396318013385 0.0653578398400075 3 {[DA]|[EG]}PKDY 6 3 52.976 0.0 0.0 4.8578 0.0 0.0 0.0 398.21747766666255 398.21747766666255 36.77825934852436 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + {[DA]|[EG]}PKDY 4.8578 + + 34 + 1 2.315 43516.9 1.0 1434 4986 6421 HBL1_DMSO_200M_050219_1,6422 HBL1_DMSO_200M_050219_1,6422,DAPKDYRQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6423 33.297 6.1 10240000.0 25 0 1645900.0 + 4208 DAPKDYRQV 9 63 546.2774609261191 1090.5403689190382 2 546.2778198122978 MULTI CID FTMS 0 0 0 6421 10140310.0 0.7230045897266898 3 -0.0688972473144531 2 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 22.65808497894818 0.2428932432760099 3 DAPKDVA 7 4 67.115 0.0 0.0 6.1543 0.0 0.0 0.0 391.1738680475219 391.1738680475219 46.14593550382132 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 DAPKDVA 6.1543 - 100 + 1 2.315 54295.5 1.0 1435 4986 6421 HBL1_DMSO_200M_050219_1,6423 HBL1_DMSO_200M_050219_1,6423,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6424 33.298 12.0 3493100.0 25 0 359110.0 + 35509 STMSTNGIPR 10 72 540.2612777208125 1078.5080025084249 2 540.2615234255791 MULTI CID FTMS 0 0 0 6421 5311494.5 0.6494047575381892 3 -0.0688972473144531 3 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 70.33199760932243 0.018925923965799 3 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 77.216 0.0 0.0 7.1596 7.1596 83.149 0.0 0.0 0.0 7.269987279362624 2.430380486862944 2.430380486862944 2.430380486862944 0 0.8494850021680094 0.0 0.805462187404089 0.7302046884880937 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR 7.1596;6.9342;6.3098;6.0845 -;+;-;- + 140 + 1 2.315 39751.7 1.0 1436 4986 6421 HBL1_DMSO_200M_050219_1,6424 HBL1_DMSO_200M_050219_1,6424,STMSTNGIPR True False STMSTNGIPR 33.298427 540.261523425579 335019326.25 6421.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 11.31532859802246 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6425 33.301 113.0 1460500.0 25 0 218230.0 + 17576 KPSQGPPR 8 112 433.7460767657013 865.4776005982026 2 433.7457763552666 MULTI CID FTMS 0 0 0 6421 563585.25 0.0520510170578676 -7 0.2608642578125 4 Unmodified _KPSQGPPR_ REV__ENST00000518198.1_1_8:142138775-142151424:+|nuORF 16.942295170755138 0.6606234159769251 3 [VG]PTQGTAA 9 -1 44.059 0.0 0.0 5.0907 0.0 0.0 0.0 80.05134760074452 80.05134760074452 18.089414498569845 0.0 0.0 0.0 0 1.024227503252014 1.6989700043360187 0.3807196863200844 0.0 [VG]PTQGTAA 5.0907 - 684 + 1 2.315 131071.9 1.0 1437 4986 6421 HBL1_DMSO_200M_050219_1,6425 HBL1_DMSO_200M_050219_1,6425,KPSQGPPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6426 33.303 83.0 999210.0 25 0 285680.0 28127 PPPLCRPLVSM 11 84 403.8879066811003 1208.6418906435008 3 403.8874389529228 MULTI CID FTMS 0 0 0 6421 521943.78125 0.0727596999510073 31 -1.025299072265625 5 Unmodified _PPPLCRPLVSM_ ENSG00000132518|ENST00000254854|GUCY2D 8.155526934196011 0.8366696279279818 3 {[QN]|[E{I|L}]|[KN]}R{M(Oxidation (M))|F}QS 6 8 35.467 0.0 0.0 2.9345 0.0 0.0 0.0 445.22031580142817 445.22031580142817 21.97264557945444 0.0 0.0 0.0 0 1.1822333069283657 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}R{M(Oxidation (M))|F}QS 2.9345 - 280 + 1 2.315 70610.5 1.0 1438 4986 6421 HBL1_DMSO_200M_050219_1,6426 HBL1_DMSO_200M_050219_1,6426,PPPLCRPLVSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6427 33.306 185.0 281060.0 25 0 34217.0 + 36402 SYSHSSSSL 9 83 477.7120428332252 953.4095327332504 2 477.7118102908134 MULTI CID FTMS 0 0 0 6421 359018.5625 0.5004156266562779 4 -0.1096534729003906 6 Unmodified _SYSHSSSSL_ ENSG00000139641|ENST00000394048|ESYT1;ENST00000548142.1_1_12:56532791-56536718:+|nuORF;nc|ENSG00000139641|Q9BSJ8-2|ESYT1 54.773552608820026 0.0299037012502309 3 [HS]SYSSSS{I|L} 9 2 + 38.522 0.0 0.0 4.0405 4.0405 79.999 0.0 0.0 0.0 4.762036441594198 15.78726850509505 4.762036441594198 8.450980400142573 0 0.7429928190999391 0.0 1.0 0.0 [HS]SYSSSS{I|L};{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))N]SSSS{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[HS]SSSS{I|L};[HV]SY[MN]{[CT]|[{M(Oxidation (M))|F}G]};{[{M(Oxidation (M))|F}C]|[YS]}[HS]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}S{I|L} 4.0405;3.1541;2.2631;1.7825;0.039763 -;-;+;-;- + 226 1 2.315 47206.8 1.0 1439 4986 6421 HBL1_DMSO_200M_050219_1,6427 HBL1_DMSO_200M_050219_1,6427,SYSHSSSSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6428 33.311 257.0 289370.0 25 0 23247.0 + 30292 QYQDAIRAH 9 101 367.8537319531912 1100.5393664597736 3 367.8526489138603 MULTI CID FTMS 0 0 0 6421 228564.828125 1.0 0 0.0 7 Unmodified _QYQDAIRAH_ ENSG00000132024|ENST00000318003|CC2D1A;ENSG00000154222|ENST00000284376|CC2D1B;ENST00000460261.5_1_1:52822810-52825784:-|nuORF;ENST00000491136.6_1_1:52823963-52826194:-|nuORF;ENST00000585896.5_1_19:14020678-14030767:+|nuORF;ENST00000589138.5_1_19:14029331-14037891:+|nuORF;nc|ENSG00000132024|Q6P1N0-2|CC2D1A;nc|ENSG00000154222|Q5T0F9-3|CC2D1B;nc|ENSG00000154222|Q5T0F9|CC2D1B 14.838274106304384 0.4350285940865338 3 DA{I|L}RAH 6 3 24.914 0.0 0.0 2.2638 0.0 0.0 419.1825413927056 0.0 419.1825413927056 0.0 13.187587626244124 0.0 0.0 0 0.0 0.0 0.0 0.0 + DA{I|L}RAH 2.2638 + + 122 + 1 2.315 66373.4 1.0 1440 4986 6421 HBL1_DMSO_200M_050219_1,6428 HBL1_DMSO_200M_050219_1,6428,QYQDAIRAH False True QYQDAIRAH 33.310985 367.85264891386 1087109.125 6421.0 nc|ENSG00000154222|Q5T0F9-3|CC2D1B;;nc|ENSG00000154222|Q5T0F9|CC2D1B;;nc|ENSG00000132024|Q6P1N0-2|CC2D1A;;ENST00000491136.6_1_1:52823963-52826194:-|nuORF;;ENST00000585896.5_1_19:14020678-14030767:+|nuORF;;ENST00000460261.5_1_1:52822810-52825784:-|nuORF;;ENSG00000154222|ENST00000284376|CC2D1B;;ENST00000589138.5_1_19:14029331-14037891:+|nuORF;;ENSG00000132024|ENST00000318003|CC2D1A 5.956440766652425 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6430 33.318 274.0 763690.0 25 0 135060.0 28629 PVGSYRLN 8 114 453.2454316791142 904.4763104250284 2 453.2463867068291 MULTI CID FTMS 0 0 0 6429 288838.3125 0.6518178960138008 2 -0.0497093200683593 1 Unmodified _PVGSYRLN_ ENST00000532739.1_1_16:16465196-16470832:+|nuORF;ENST00000537112.5_1_16:16421763-16427707:+|nuORF;ENST00000541836.5_1_16:15021147-15029115:+|nuORF 39.957323273325 0.2350051964751539 3 PKDYRQV 7 5 + 56.187 0.0 0.0 6.2121 6.2121 90.057 0.0 0.0 0.0 28.064925257595164 6.973666748066663 6.973666748066663 12.385153977734753 0 1.0941876774005248 0.0 0.0 0.9361818737241734 PKDYRQV;PKDYR[AG]V;PKDV[HN]PV;PV[SG]YRQV;PKDV[HN]VP;PKVD[HN]PV;VP[SG]YRQV;PKVW[YN]V;PKVD[HN]VP;PVKD[HN]PV 6.2121;4.8428;4.7226;4.5007;4.3201;3.837;3.6428;3.5871;3.4344;3.1572 -;-;-;-;-;-;-;-;-;- 781 + 1 2.315 162181.0 1.0 1441 4987 6429 HBL1_DMSO_200M_050219_1,6430 HBL1_DMSO_200M_050219_1,6430,PVGSYRLN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6431 33.332 800.0 116810.0 25 0 16070.0 + -1 CLIMLTVSD 9 141 534.2590934377832 1066.5036339423664 2 534.2588989138603 MULTI CID FTMS 0 0 0 6429 90738.78125 0.0101075578513409 47 -1.5015296936035156 2 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))LIM(Oxidation (M))LTVSD_ REV__ENST00000368632.6_1_6:114277177-114277249:-|nuORF 4.75600775471527 0.7486543447549536 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PV{[CA]|SS}HV{[QG]|[NA]} 10 -1 + 24.181 0.0 0.0 2.2673 2.2673 67.183 0.0 0.0 0.0 0.8278537031645037 7.269987279362621 0.8278537031645037 0.8278537031645037 0 0.5 0.0 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PV{[CA]|SS}HV{[QG]|[NA]};{[DA]|[EG]}APV{[CA]|SS}HV{[QG]|[NA]};[TP][PA]S{[CA]|SS}HV{[QG]|[NA]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P[PA]{[QN]|[E{I|L}]|[KN]}V{[QG]|[NA]};{[DA]|[EG]}AP[PA]{[QN]|[E{I|L}]|[KN]}V{[QG]|[NA]};[VP]YY{[QN]|[E{I|L}]|[KN]}V{[QG]|[NA]} 2.2673;2.1897;0.582;0.5092;0.43157;0.045945 -;-;-;-;-;- 177 1 2.315 77354.9 0.6000000238418579 1442 4987 6429 HBL1_DMSO_200M_050219_1,6431 HBL1_DMSO_200M_050219_1,6431,CLIMLTVSD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6433 33.34 175.0 356070.0 25 0 31718.0 -1 MAPPPPRSV 9 81 484.2552669328838 966.4959809325676 2 484.2557861208916 MULTI CID FTMS 0 0 0 6432 206778.734375 0.2533561191971381 -10 0.3119735717773437 1 Oxidation (M) _M(Oxidation (M))APPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 3 {[MS]|[{M(Oxidation (M))|F}A]}PPP 5 -1 46.823 0.0 0.0 4.8446 0.0 0.0 0.0 454.24375330142817 454.24375330142817 25.568109453757657 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}PPP 4.8446 + + 160 + 1 2.315 54387.1 1.0 1443 4988 6432 HBL1_DMSO_200M_050219_1,6433 HBL1_DMSO_200M_050219_1,6433,MAPPPPRSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6434 33.347 398.0 287170.0 25 0 57365.0 + 6463 EAFQHRSV 8 117 487.2461094114978 972.4776658897956 2 487.2462951540947 MULTI CID FTMS 0 0 0 6432 194604.234375 0.7610403877173941 4 -0.131561279296875 2 Unmodified _EAFQHRSV_ ENSG00000166888|ENST00000300134|STAT6;ENST00000555222.5_1_12:57492966-57496222:-|nuORF;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6 43.77239144664712 0.1711793192264233 3 EA{M(Oxidation (M))|F}QHRSV 8 0 + 70.474 0.0 0.0 7.2469 7.2469 92.062 0.0 0.0 0.0 51.13346909271678 12.84013907034474 12.84013907034474 9.262137858390815 0 0.9247425010840048 2.0 0.3807196863200844 0.4247425010840047 + + EA{M(Oxidation (M))|F}QHRSV;EA{M(Oxidation (M))|F}[AG]HRSV;EA{[RE]|[WV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[{I|L}P];EA{M(Oxidation (M))|F}{[RE]|[WV]}[PA][PG];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RP]QDDV;[{I|L}V][Y{M(Oxidation (M))|F}][W{M(Oxidation (M))|F}]V 7.2469;6.2945;2.9153;2.3531;1.5733;0.27834 +;-;-;-;-;- + 227 + 1 2.315 91835.0 1.0 1444 4988 6432 HBL1_DMSO_200M_050219_1,6434 HBL1_DMSO_200M_050219_1,6434,EAFQHRSV False True EAFQHRSV 33.346968 487.246295154095 1283888.75 6432.0 nc|ENSG00000166888|P42226-3|STAT6;;ENST00000555222.5_1_12:57492966-57496222:-|nuORF;;nc|ENSG00000166888|P42226-2|STAT6;;ENSG00000166888|ENST00000300134|STAT6 9.12985340754191 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6435 33.361 800.0 39982.0 25 0 3364.9 -1 0 51 881.7001327583862 2642.0785688753585 3 882.0351440310478 MULTI CID FTMS 0 0 0 6432 70381.0234375 0.92211280462278 -1 0.0208778381347656 3 3 [EP]AASA 6 -1 46.471 0.0 0.0 1.7589 0.0 0.0 0.0 2112.816214709596 2112.816214709596 29.0232697082579 0.0 0.0 0.0 0 0.5 1.154901959985743 1.0 0.0 [EP]AASA 1.7589 - 96 1 2.315 34751.3 0.4699999988079071 1445 4988 6432 HBL1_DMSO_200M_050219_1,6435 HBL1_DMSO_200M_050219_1,6435, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6437 33.378 800.0 78330.0 25 0 4060.9 -1 0 82 714.9736051167364 2141.898985950409 3 714.9732543826103 MULTI CID FTMS 0 0 0 6436 140403.109375 0.519393474038589 6 -0.2154655456542968 1 3 [PS]{[YD]|[{M(Oxidation (M))|F}M]}Q[C(Carbamidomethyl (C))S]SA 9 -1 49.402 0.0 0.0 2.3064 0.0 0.0 0.0 1143.48070223295 1143.48070223295 23.651788993191435 0.0 0.0 0.0 0 0.5 1.6989700043360187 2.055462187404089 0.0 [PS]{[YD]|[{M(Oxidation (M))|F}M]}Q[C(Carbamidomethyl (C))S]SA 2.3064 - 573 1 2.263 52735.5 0.7400000095367432 1446 4989 6436 HBL1_DMSO_200M_050219_1,6437 HBL1_DMSO_200M_050219_1,6437, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6438 33.38 120.0 724290.0 25 0 241600.0 + -1 LGEGMCMR 8 99 329.1345268698817 0 329.0052368044853 PEAK CID FTMS 0 0 0 6436 27794.1171875 1.0 0 0.0 2 Carbamidomethyl (C),2 Oxidation (M) _LGEGM(Oxidation (M))C(Carbamidomethyl (C))M(Oxidation (M))R_ REV__ENSG00000108242|ENST00000285979|CYP2C18;REV__nc|ENSG00000108242|P33260-2|CYP2C18 1.6526216038709556 0.5946231833523572 3 G 1 -1 1.9897 0.0 0.0 0.30319 0.0 0.0 528.1590245876166 68.05144678287343 596.21047137049 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.30319 + + 8 + 1 2.263 73695.1 1.0 1447 4989 6436 HBL1_DMSO_200M_050219_1,6438 HBL1_DMSO_200M_050219_1,6438,LGEGMCMR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6439 33.383 123.0 413870.0 25 0 62177.0 + -1 LTGWPLTMK 9 65 531.7847963696964 1061.5550398061928 2 531.7845336794853 MULTI CID FTMS 0 0 0 6436 558106.125 1.0 0 0.0 3 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 29.081581746732265 0.1611639662936252 3 HT{M(Oxidation (M))|F}K 4 -1 42.568 0.0 0.0 4.0099 0.0 0.0 530.3078607063866 0.0 530.3078607063866 0.0 29.15135511359813 0.0 0.0 0 1.424742501084005 0.0 0.0 0.2887254899964357 HT{M(Oxidation (M))|F}K 4.0099 - 138 + 1 2.263 46546.1 1.0 1448 4989 6436 HBL1_DMSO_200M_050219_1,6439 HBL1_DMSO_200M_050219_1,6439,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6440 33.396 726.0 361800.0 25 0 33571.0 + + 8117 EPIGRGTKV 9 160 478.7800415006206 955.5455300680412 2 478.7798644900322 MULTI CID FTMS 0 0 0 6436 289652.3125 0.1877367451478638 -4 0.0990562438964843 4 Unmodified _EPINRTKV_ nc|ENSG00000183199|Q58FF7|HSP90AB3P;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;ENSG00000096384|ENST00000371646|HSP90AB1 74.92900055777586 0.1049409103209122 3 EP{I|L}VN{[SA]|[TG]}K 8 -1 56.062 0.0 0.0 5.867 0.0 0.0 0.0 114.0566652887328 114.0566652887328 16.32049169291699 0.0 0.0 0.0 0 1.1111961487184816 1.3979400086720375 0.7742275032520141 0.6307196863200843 EP{I|L}VN{[SA]|[TG]}K 5.867 - 1254 + 1 2.263 202035.0 1.0 1449 4989 6436 HBL1_DMSO_200M_050219_1,6440 HBL1_DMSO_200M_050219_1,6440,EPINRTKV False False EPIGRGTKV 33.395507 478.779864490032 14979692.5 6436.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 5.845709323883057 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6441 33.402 338.0 1148800.0 25 0 250950.0 + 40289 VGVGGRPPG 9 165 398.2273118076948 794.4400706821896 2 398.2265807986259 MULTI CID FTMS 0 0 0 6436 165362.203125 0.3093444150184656 -5 0.1151123046875 5 Unmodified _VGVGGRPPG_ ENST00000477264.1_1_1:9790568-9793533:-|nuORF 34.10243960390752 0.1078313939113124 3 KPT[RN]D 6 8 46.473 0.0 0.0 5.8497 0.0 0.0 0.0 80.05139337711171 80.05139337711171 13.29863547571516 0.0 0.0 0.0 0 1.174742501084005 0.0 1.2329535345634597 0.0 KPT[RN]D 5.8497 - 979 + 1 2.263 299773.8 1.0 1450 4989 6436 HBL1_DMSO_200M_050219_1,6441 HBL1_DMSO_200M_050219_1,6441,VGVGGRPPG True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6443 33.417 800.0 107960.0 25 0 9739.5 + -1 NVSCKLYTC 9 137 572.7599049551981 0 572.7599365115166 PEAK CID FTMS 0 0 0 6442 96204.796875 0.6940471806359129 -1 0.0407562255859375 1 2 Carbamidomethyl (C) _NVSC(Carbamidomethyl (C))KLYTC(Carbamidomethyl (C))_ REV__ENSG00000078070|ENST00000265594|MCCC1;REV__ENST00000464601.5_1_3:182733228-182740387:-|nuORF 15.847184025352805 0.2451986057151378 3 {M(Oxidation (M))|F}QDG 4 -1 29.887 0.0 0.0 2.6136 0.0 0.0 568.2301848109836 125.07267175845938 693.302856569443 0.0 0.0 0.0 0.0 0 1.16944517631652 0.0 0.8807196863200843 0.0 {M(Oxidation (M))|F}QDG 2.6136 - 319 + 1 2.263 68304.2 0.8299999833106995 1451 4990 6442 HBL1_DMSO_200M_050219_1,6443 HBL1_DMSO_200M_050219_1,6443,NVSCKLYTC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6444 33.418 33.0 2073000.0 25 0 265720.0 -1 LKFLQMAL 8 77 327.19340059159606 0 327.1939575076103 PEAK CID FTMS 0 0 0 6442 1637638.375 0.6431424860452327 -3 0.0904655456542968 2 Oxidation (M) _LKFLQM(Oxidation (M))AL_ ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213 11.640296217721598 0.5231213682848052 3 Y 1 -1 4.6041 0.0 0.0 0.70575 0.0 0.0 264.1567158787015 222.1251619928344 486.2818778715359 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.70575 - 7 + 1 2.263 61421.5 1.0 1452 4990 6442 HBL1_DMSO_200M_050219_1,6444 HBL1_DMSO_200M_050219_1,6444,LKFLQMAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6445 33.421 103.0 612920.0 25 0 93474.0 + 39574 VCRNRIRV 8 89 339.20163531866143 1014.5830765561844 3 339.2017700076103 MULTI CID FTMS 0 0 0 6442 520375.03125 0.3351866626473255 -2 0.0695877075195312 3 Unmodified _VCRNRIRV_ REV__ENSG00000120333|ENST00000476371|MRPS14 21.74664581756881 0.5868176546531598 3 V 1 -1 12.764 0.0 0.0 1.2581 0.0 0.0 897.503477107257 0.0 897.503477107257 0.0 -6.761408983840379 -6.761408983840379 0.0 0 0.0 0.0 0.0 0.0 V 1.2581 + + 55 + 1 2.263 57446.5 1.0 1453 4990 6442 HBL1_DMSO_200M_050219_1,6445 HBL1_DMSO_200M_050219_1,6445,VCRNRIRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6446 33.426 281.0 824170.0 25 0 74585.0 + 21232 LPDIKQRS 8 156 319.52263248316945 955.5460680497084 3 319.5222656130791 MULTI CID FTMS 0 0 0 6442 396721.21875 0.3997828306262163 -3 0.0904655456542968 4 Unmodified _LPDIKQRS_ REV__ENSG00000099992|ENST00000215790|TBC1D10A;REV__ENST00000462073.5_1_22:30689736-30691829:-|nuORF;REV__ENST00000466666.5_1_22:30689582-30690835:-|nuORF;REV__nc|ENSG00000099992|Q9BXI6-2|TBC1D10A 21.74664581756881 0.5868176546531598 3 EP{I|L}VK[KC]S 8 -1 40.126 0.0 0.0 4.1993 0.0 0.0 0.0 68.05146967105702 68.05146967105702 16.18562527100117 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.4247425010840047 EP{I|L}VK[KC]S 4.1993 - 305 + 1 2.263 186478.2 1.0 1454 4990 6442 HBL1_DMSO_200M_050219_1,6446 HBL1_DMSO_200M_050219_1,6446,LPDIKQRS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6448 33.439 561.0 311350.0 25 0 103830.0 -1 0 139 490.2841841756385 489.2769077090385 1 490.2850524783134 MULTI CID FTMS 0 0 0 6447 272222.65625 0.6396055927350188 2 -0.0728988647460937 1 3 [KP]N 3 -1 18.591 0.0 0.0 3.7997 0.0 0.0 0.0 147.0637783967916 147.0637783967916 8.676156104756704 0.0 0.0 0.0 0 0.1271595765414318 0.0 0.0 0.6861818737241735 [KP]N 3.7997 - 68 1 2.2 136804.8 1.0 1455 4991 6447 HBL1_DMSO_200M_050219_1,6448 HBL1_DMSO_200M_050219_1,6448, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6449 33.451 676.0 229560.0 25 0 14175.0 16709 KETDMREAA 9 143 525.7496663361273 1049.4847797390546 2 526.2508422732353 MULTI CID FTMS 0 0 0 6447 231526.71875 0.8563202036808273 -2 0.0649757385253906 2 Unmodified _KETDMREAA_ ENSG00000175352|ENST00000309166|NRIP3 9.38312468134398 0.5871240394367778 3 SPV 3 9 13.188 0.0 0.0 1.2566 0.0 0.0 73.02715557090933 690.2454928033811 763.2726483742905 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SPV 1.2566 - 449 + 1 2.2 118291.9 1.0 1456 4991 6447 HBL1_DMSO_200M_050219_1,6449 HBL1_DMSO_200M_050219_1,6449,KETDMREAA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6450 33.464 751.0 215200.0 25 0 27540.0 + 37088 TGNHTVNVF 9 146 494.7463743333286 987.4781957334573 2 494.7471191287041 MULTI CID FTMS 0 0 0 6447 153391.875 0.6103798294892319 -1 0.0242195129394531 3 Unmodified _TGNHTVNVF_ REV__ENSG00000076662|ENST00000160262|ICAM3;REV__ENST00000587992.1_1_19:10444535-10445133:-|nuORF 28.49450938151212 0.1686335738423394 3 {[SA]|[TG]}[VS]HQNV{M(Oxidation (M))|F} 9 -1 + 49.776 0.0 0.0 5.0407 5.0407 79.497 0.0 0.0 0.0 9.220578260679249 16.478174818886373 9.220578260679249 4.454934047959988 0 0.0 1.154901959985743 0.5629529932484498 0.8494850021680094 {[SA]|[TG]}[VS]HQNV{M(Oxidation (M))|F};{[SA]|[TG]}A[RN]HSV{M(Oxidation (M))|F};{[SA]|[TG]}W[HK]NV{M(Oxidation (M))|F};{[SA]|[TG]}[VS]HQGGV{M(Oxidation (M))|F};[VG]{[MG]|[TS]}HQNV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}H{I|L}[SG]SV{M(Oxidation (M))|F};[SG]S{I|L}HQNV{M(Oxidation (M))|F};{[SA]|[TG]}[VS]H[AG]NV{M(Oxidation (M))|F};{[SA]|[TG]}W[HK]GGV{M(Oxidation (M))|F};[VG]{[MG]|[TS]}HQGGV{M(Oxidation (M))|F} 5.0407;4.5896;4.4649;4.1082;4.107;3.643;3.6293;3.6019;3.5269;3.1745 -;-;-;-;-;-;-;-;-;- 938 1 2.2 125141.8 1.0 1457 4991 6447 HBL1_DMSO_200M_050219_1,6450 HBL1_DMSO_200M_050219_1,6450,TGNHTVNVF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6452 33.472 346.0 340300.0 25 0 72739.0 + 5014 DGVPSKNTV 9 102 458.7402758422632 915.4659987513264 2 458.7405883669853 MULTI CID FTMS 0 0 0 6451 630017.375 0.4189725662833312 12 -0.3933067321777344 1 Unmodified _DGVPSKNTV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000510321.1_1_4:146044588-146044753:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 27.628801355627647 0.1796483985696185 3 GSPNTV[RD] 8 6 39.206 0.0 0.0 4.2826 0.0 0.0 71.07441146064609 0.0 71.07441146064609 0.0 14.28456906244314 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.2302046884880938 GSPNTV[RD] 4.2826 - 373 1 2.2 94932.4 1.0 1458 4992 6451 HBL1_DMSO_200M_050219_1,6452 HBL1_DMSO_200M_050219_1,6452,DGVPSKNTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6453 33.485 764.0 109000.0 25 0 16758.0 43897 YFVIQPWQEIH 11 82 730.3734101095596 0 730.3724243044853 PEAK CID FTMS 0 0 0 6451 153603.453125 0.778713627340548 2 -0.0866584777832031 2 Unmodified _YFVIQPWQEIH_ ENSG00000196116|ENST00000355295|TDRD7;nc|ENSG00000196116|Q8NHU6-2|TDRD7;nc|ENSG00000196116|Q8NHU6-3|TDRD7 5.296884461304476 0.47618401536486 3 VSGAASA 7 10 43.612 0.0 0.0 2.9897 0.0 0.0 747.3693655298629 165.06783472232658 912.4372002521894 0.0 0.0 0.0 0.0 0 0.0 0.0 1.8441876774005248 0.0 VSGAASA 2.9897 - 1113 + 1 2.2 66173.5 1.0 1459 4992 6451 HBL1_DMSO_200M_050219_1,6453 HBL1_DMSO_200M_050219_1,6453,YFVIQPWQEIH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6454 33.499 800.0 59497.0 25 0 10335.0 -1 0 43 1147.469287097454 0 1147.469287097454 PEAK CID FTMS 0 0 0 -1 0 3 3 K 1 -1 6.9897 0.0 0.0 0.30484 0.0 0.0 1296.350946558577 865.4509663985641 2161.801912957141 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.30484 - 2 + 1 2.2 44848.9 0.8600000143051147 1460 4992 6451 HBL1_DMSO_200M_050219_1,6454 HBL1_DMSO_200M_050219_1,6454, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6456 33.511 590.0 68774.0 25 0 7387.8 -1 0 54 870.8753190152113 3479.472170194445 4 871.1257812380791 MULTI CID FTMS 0 0 0 6455 114983.34375 0.1879550844873216 6 -0.2083854675292968 1 3 K{I|L} 2 -1 5.5732 0.0 0.0 0.16017 0.0 0.0 2482.8973235810217 752.3619478815061 3235.259271462528 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L} 0.16017 - 10 + 1 2.2 38012.6 1.0 1461 4993 6455 HBL1_DMSO_200M_050219_1,6456 HBL1_DMSO_200M_050219_1,6456, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6457 33.513 115.0 630810.0 25 0 86760.0 12566 GVIDILSLS 9 106 306.1835654480441 0 306.1847717165947 PEAK CID FTMS 0 0 0 6455 775464.6875 1.0 0 0.0 2 Unmodified _GVIDILSLS_ nc|ENSG00000285467|P0CG22|DHRS4L1 4.3292370932331545 0.3444685223463734 3 P 1 9 10.485 0.0 0.0 1.7178 0.0 0.0 128.09553725410314 382.1814866145085 510.2770238686117 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 P 1.7178 - 36 1 2.2 64770.6 1.0 1462 4993 6455 HBL1_DMSO_200M_050219_1,6457 HBL1_DMSO_200M_050219_1,6457,GVIDILSLS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6458 33.522 503.0 362890.0 25 0 133660.0 + 30535 RELEVNKKMEQ 11 66 702.3678824062074 1402.7212118792147 2 702.3684570193291 MULTI CID FTMS 0 0 0 6455 343349.53125 0.5359564268469112 -3 0.0971183776855468 3 Unmodified _RELEVNKKMEQ_ REV__ENSG00000107890|ENST00000376087|ANKRD26;REV__nc|ENSG00000107890|Q9UPS8-2|ANKRD26 4.897010918128616 0.8520435188433833 3 KPTG 4 -1 30.165 0.0 0.0 2.1505 0.0 0.0 406.14730531694914 610.3332613580686 1016.4805666750178 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.4247425010840047 KPTG 2.1505 - 38 + 1 2.2 133981.0 1.0 1463 4993 6455 HBL1_DMSO_200M_050219_1,6458 HBL1_DMSO_200M_050219_1,6458,RELEVNKKMEQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6459 33.532 546.0 499100.0 25 0 43278.0 + 40177 VGPLERRV 8 283 309.19001243312 0 309.1901733279228 PEAK CID FTMS 0 0 0 6455 334104.28125 1.0 0 0.0 4 Unmodified _VGPLERRV_ REV__ENSG00000060491|ENST00000290291|OGFR;REV__nc|ENSG00000060491|Q9NZT2-2|OGFR 1.844237919475145 0.5938792933265344 3 K 1 -1 11.479 0.0 0.0 1.8624 0.0 0.0 117.07726185931833 368.1696010147814 485.2468628740997 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.2742275032520141 K 1.8624 - 28 + 1 2.2 216717.2 1.0 1464 4993 6455 HBL1_DMSO_200M_050219_1,6459 HBL1_DMSO_200M_050219_1,6459,VGPLERRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6460 33.541 543.0 391180.0 25 0 34681.0 43441 WSPVLSPRL 9 213 352.2051169563905 1053.5935214693716 3 352.2049133181572 MULTI CID FTMS 0 0 0 6455 311977.21875 0.923699222903492 1 -0.051513671875 5 Unmodified _WSPVLSPRL_ ENST00000599581.5_1_19:52786637-52794448:+|nuORF 21.74664581756881 0.2544899275067181 3 GTPR{I|L} 5 6 45.604 0.0 0.0 4.3284 0.0 0.0 511.28709609199376 0.0 511.28709609199376 0.0 15.574966643448748 0.0 0.0 0 0.3807196863200844 0.0 0.6861818737241735 0.3252574989159953 GTPR{I|L} 4.3284 - 1369 1 2.2 169780.6 1.0 1465 4993 6455 HBL1_DMSO_200M_050219_1,6460 HBL1_DMSO_200M_050219_1,6460,WSPVLSPRL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6461 33.55 508.0 350100.0 25 0 30512.0 + 17707 KPTMSLPLPA 10 126 527.8041808165777 1053.5938086999554 2 527.8052245974541 MULTI CID FTMS 0 0 0 6455 300520.75 0.6736073694954822 -1 0.0351448059082031 6 Unmodified _KPTMSLPLPA_ REV__ENST00000234313.7_1_2:68623094-68623172:+|nuORF 22.736283301280096 0.4578556481593033 3 KPTGQR[{I|L}A]SP 10 -1 + 63.849 0.0 0.0 6.0601 6.0601 87.24 0.0 0.0 0.0 52.96732629334145 8.877820076658878 8.877820076658878 9.164539485499247 0 1.2302046884880935 0.0 1.035666875892183 0.0 KPTGQR[{I|L}A]SP;KPTG[AG]R[{I|L}A]SP;KPTGQR[PS]A{I|L};KPTG{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}QP;KPTG{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}PQ;KPTG[AG]R[PS]A{I|L} 6.0601;5.1903;4.4195;3.8247;3.8081;3.5497 -;-;-;-;-;- 474 + 1 2.2 141230.5 1.0 1466 4993 6455 HBL1_DMSO_200M_050219_1,6461 HBL1_DMSO_200M_050219_1,6461,KPTMSLPLPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6463 33.554 0.31 122440000.0 25 0 19429000.0 + 17604 KPTAAFHLL 9 47 499.2931404244984 996.5717279157968 2 499.2935974001884 MULTI CID FTMS 0 0 0 6462 178987664.0 0.7896155452506125 2 -0.0385322570800781 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 3 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3559694821856 667.3559694821856 28.098943791441968 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 12 + 1 2.14 36461.8 1.0 1467 4994 6462 HBL1_DMSO_200M_050219_1,6463 HBL1_DMSO_200M_050219_1,6463,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6464 33.556 0.84 53865000.0 25 0 8101600.0 + 27547 PKYIHNLL 8 71 333.1980440440732 996.5723027324194 3 333.1979553103447 MULTI CID FTMS 0 0 0 6462 65177884.0 0.8357114399608898 1 -0.0260772705078125 2 Unmodified _PKYIHNLL_ ENSG00000126653|ENST00000247026|NSRP1 13.50788311687929 0.7113601687236069 3 [KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SAPK{I|L} 9 6 + 26.154 0.0 0.0 2.6244 2.6244 73.005 0.0 0.0 0.0 0.9202342572982792 15.903339795194285 0.9202342572982792 4.259687322722812 0 0.3807196863200844 0.0 0.0 0.3807196863200844 [KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SAPK{I|L};[KP]{[SA]|[TG]}WAPK{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}NR{I|L};[KP]{[SA]|[TG]}[QT]PR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S[KP]A{I|L};[KP]{[SA]|[TG]}W[KP]A{I|L} 2.6244;2.197;2.0237;2.0025;1.347;0.91959 -;-;-;-;-;- 96 1 2.14 42125.3 1.0 1468 4994 6462 HBL1_DMSO_200M_050219_1,6464 HBL1_DMSO_200M_050219_1,6464,PKYIHNLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6465 33.558 96.0 558360.0 25 0 83967.0 + 40135 GVIKRTENV 9 73 508.2971417069225 1014.579730480645 2 508.2983581423759 MULTI CID FTMS 0 0 0 6462 941183.0625 1.0 0 0.0 3 Unmodified _VGLRRCLQA_ nc|ENSG00000132256|Q9C035-3|TRIM5;nc|ENSG00000132256|Q9C035-2|TRIM5;nc|ENSG00000132256|Q9C035-4|TRIM5;ENSG00000132256|ENST00000380034|TRIM5 16.942295170755138 0.3780752226737986 3 VG{I|L}K 4 6 55.745 0.0 0.0 5.4944 0.0 0.0 0.0 614.2925012440093 614.2925012440093 44.63615337528019 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3807196863200844 VG{I|L}K 5.4944 - 43 + 1 2.14 45542.4 1.0 1469 4994 6462 HBL1_DMSO_200M_050219_1,6465 HBL1_DMSO_200M_050219_1,6465,VGLRRCLQA False False GVIKRTENV 33.557606 508.298358142376 4038154.25 6462.0 nc|ENSG00000132256|Q9C035-3|TRIM5;;nc|ENSG00000132256|Q9C035-2|TRIM5;;nc|ENSG00000132256|Q9C035-4|TRIM5;;ENSG00000132256|ENST00000380034|TRIM5 2.6010663509368896 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6466 33.56 85.0 775020.0 25 0 81800.0 + -1 IQRLETMK 8 78 517.7865055958047 1033.5584582584092 2 517.7867919802666 MULTI CID FTMS 0 0 0 6462 556456.875 0.0022854060238853 148 -6.80865478515625 4 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 KTT[{I|L}P][WP]K 8 -1 47.625 0.0 0.0 4.6078 0.0 0.0 63.995445343619686 0.0 63.995445343619686 0.0 34.12971259689115 0.0 0.0 0 1.274227503252014 0.0 1.174742501084005 0.25 KTT[{I|L}P][WP]K 4.6078 - 111 + 1 2.14 53834.3 1.0 1470 4994 6462 HBL1_DMSO_200M_050219_1,6466 HBL1_DMSO_200M_050219_1,6466,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6467 33.567 402.0 351460.0 25 0 59837.0 + 17470 KPEPLLMI 8 129 470.7825271287436 939.5505013242872 2 470.7824584841728 MULTI CID FTMS 0 0 0 6462 465547.5625 0.8030549410055338 1 -0.0260772705078125 5 Unmodified _KPEPLLMI_ REV__ENSG00000178163|ENST00000326756|ZNF518B 30.22481116460888 0.4082965392918993 3 KPT 3 -1 43.94 0.0 0.0 4.6767 0.0 0.0 0.0 610.3340787285495 610.3340787285495 26.95046257204389 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 KPT 4.6767 - 149 + 1 2.14 112080.2 1.0 1471 4994 6462 HBL1_DMSO_200M_050219_1,6467 HBL1_DMSO_200M_050219_1,6467,KPEPLLMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6468 33.576 549.0 439120.0 25 0 45395.0 + 18459 KYHVSEKPY 9 192 384.20147086335015 1149.5825831902505 3 384.2024413943291 MULTI CID FTMS 0 0 0 6462 259057.21875 0.1207113681964579 -5 0.1893882751464843 6 Unmodified _KYHVSEKPY_ ENSG00000165264|ENST00000379847|NDUFB6 41.95555342248728 0.0647214845423414 3 {[WN]|[YH]}K{I|L}P[YG]Y 8 6 39.43 0.0 0.0 3.4299 0.0 0.0 0.0 125.06602809576692 125.06602809576692 24.507659098993045 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.6237125054200234 {[WN]|[YH]}K{I|L}P[YG]Y 3.4299 - 907 1 2.14 196703.8 1.0 1472 4994 6462 HBL1_DMSO_200M_050219_1,6468 HBL1_DMSO_200M_050219_1,6468,KYHVSEKPY True True KYHVSEKPY 33.576336 384.202441394329 10253200.1875 6462.0 ENSG00000165264|ENST00000379847|NDUFB6 6.0252407391866045 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6470 33.58 7.8 11963000.0 25 0 1793200.0 + 38087 TPKGRPGPG 9 82 433.7460767657013 865.4776005982026 2 433.7457763552666 MULTI CID FTMS 0 0 0 6469 7554650.5 0.697724509365226 2 -0.0393104553222656 1 Unmodified _TPKGRPGPG_ REV__ENST00000564287.1_1:212731978-212732290:+|nuORF 14.838274106304384 0.4350285940865338 3 [VG]PTQGTAA 9 -1 49.715 0.0 0.0 5.7442 0.0 0.0 0.0 80.05138574771718 80.05138574771718 23.746068678535792 0.0 0.0 0.0 0 1.0044321917401078 1.6989700043360187 0.3807196863200844 0.0 [VG]PTQGTAA 5.7442 - 414 + 1 2.14 77090.8 1.0 1473 4995 6469 HBL1_DMSO_200M_050219_1,6470 HBL1_DMSO_200M_050219_1,6470,TPKGRPGPG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6471 33.582 31.0 1520700.0 25 0 182500.0 + 4204 DAPKDYRQV 9 72 364.52117959176223 1090.5417093754868 3 364.5208007693291 MULTI CID FTMS 0 0 0 6469 1750679.375 0.0812363106132242 13 -0.5073776245117188 2 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 41.8396318013385 0.0653578398400075 3 {[DA]|[EG]}PKDV 6 3 53.461 0.0 0.0 4.9022 0.0 0.0 0.0 462.21250330142817 462.21250330142817 34.25250945692483 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.4247425010840047 {[DA]|[EG]}PKDV 4.9022 - 30 + 1 2.14 45926.3 1.0 1474 4995 6469 HBL1_DMSO_200M_050219_1,6471 HBL1_DMSO_200M_050219_1,6471,DAPKDYRQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6472 33.584 85.0 766190.0 25 0 111470.0 + 4209 DAPKDYRQV 9 58 546.2774609261191 1090.5403689190382 2 546.2770873904228 MULTI CID FTMS 0 0 0 6469 1011213.625 0.0720995799999372 12 -0.4603996276855469 3 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 18.373094154950223 0.3393451798331396 3 DAPKD 5 4 62.563 0.0 0.0 5.7369 0.0 0.0 0.0 561.2799259034828 561.2799259034828 41.59379381312206 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.0 0.0 + DAPKD 5.7369 + + 28 + 1 2.14 56795.4 1.0 1475 4995 6469 HBL1_DMSO_200M_050219_1,6472 HBL1_DMSO_200M_050219_1,6472,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6473 33.587 158.0 405920.0 25 0 63539.0 + 11226 GEPVERLE 8 89 464.74048701902063 927.4664211048412 2 464.7403747439384 MULTI CID FTMS 0 0 0 6469 494204.0 1.0 0 0.0 4 Unmodified _GEPVERLE_ REV__ENSG00000167178|ENST00000453268|ISLR2 26.88365393820708 0.4786498634179528 3 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L} 4 -1 37.619 0.0 0.0 4.0562 0.0 0.0 0.0 478.24245993274553 478.24245993274553 12.91325298820567 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L} 4.0562 - 77 + 1 2.14 55216.7 1.0 1476 4995 6469 HBL1_DMSO_200M_050219_1,6473 HBL1_DMSO_200M_050219_1,6473,GEPVERLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6474 33.589 100.0 698020.0 25 0 70300.0 -1 LSVHEVVEKQ 10 84 403.8879066811003 1208.6418906435008 3 403.8878356814384 MULTI CID FTMS 0 0 0 6469 488356.21875 0.0680775463218693 40 -1.2885284423828125 5 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSVHEVVEKQ_ ENST00000342315.8_1_12:113424985-113425036:+|nuORF 9.38312468134398 0.6832340498775793 3 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 7 -1 33.689 0.0 0.0 2.7873 0.0 0.0 0.0 266.1630037897094 266.1630037897094 16.61831843688759 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 2.7873 - 207 + 1 2.14 58880.9 1.0 1477 4995 6469 HBL1_DMSO_200M_050219_1,6474 HBL1_DMSO_200M_050219_1,6474,LSVHEVVEKQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6476 33.593 124.0 690360.0 25 0 83742.0 -1 MAPPPPRSV 9 74 484.2552669328838 966.4959809325676 2 484.2557250857353 MULTI CID FTMS 0 0 0 6475 689535.5 0.8448549550160106 -2 0.0385322570800781 1 Oxidation (M) _M(Oxidation (M))APPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 3 {[MS]|[{M(Oxidation (M))|F}A]}PPP 5 -1 48.456 0.0 0.0 5.0135 0.0 0.0 0.0 454.24265466861567 454.24265466861567 27.998037644757048 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}PPP 5.0135 + + 151 + 1 2.14 68550.3 1.0 1478 4996 6475 HBL1_DMSO_200M_050219_1,6476 HBL1_DMSO_200M_050219_1,6476,MAPPPPRSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6477 33.596 158.0 708650.0 25 0 77520.0 + 3190 AVVPKTKEV 9 113 324.2027457124611 969.5864077375832 3 324.2023498415947 MULTI CID FTMS 0 0 0 6475 549614.625 0.3091266062917486 -3 0.0900459289550781 2 Unmodified _AVVPKTKEV_ ENSG00000135862|ENST00000258341|LAMC1 26.268140514670165 0.1969607489560049 3 {[VA]|[{I|L}G]}VPKT 6 3 57.466 0.0 0.0 5.9268 0.0 0.0 0.0 371.1926058404906 371.1926058404906 38.46536598237242 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.7302046884880937 0.0 + {[VA]|[{I|L}G]}VPKT 5.9268 + + 231 + 1 2.14 90629.1 1.0 1479 4996 6475 HBL1_DMSO_200M_050219_1,6477 HBL1_DMSO_200M_050219_1,6477,AVVPKTKEV False True AVVPKTKEV 33.596289 324.202349841595 7888754.5 6475.0 ENSG00000135862|ENST00000258341|LAMC1 4.765679995218913 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6478 33.605 478.0 208730.0 25 0 16666.0 + 35510 STMSTNGIPR 10 122 540.2612777208125 1078.5080025084249 2 540.2617065310478 MULTI CID FTMS 0 0 0 6475 410693.4375 0.0502130374421385 13 -0.5413780212402344 3 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 79.59630418116434 0.0173986606250113 3 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 81.815 0.0 0.0 7.586 7.586 63.646 0.0 0.0 0.0 7.269987279362624 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.805462187404089 1.110924374808178 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STN[RP]{[VA]|[{I|L}G]};AAE[RK]TSE{[MG]|[TS]};[VG]D[RK]TSE{[MG]|[TS]};{[MG]|[TS]}{M(Oxidation (M))|F}STGG[RP]{[VA]|[{I|L}G]};AA[{I|L}A][QT]TSE{[MG]|[TS]};{[MG]|[TS]}{M(Oxidation (M))|F}S[KT][QP]SP 7.586;7.586;6.7362;6.7362;3.9966;3.3881;3.1604;3.1468;2.6441;2.5836 -;+;-;-;-;-;-;-;-;- + 452 + 1 2.14 78596.3 1.0 1480 4996 6475 HBL1_DMSO_200M_050219_1,6478 HBL1_DMSO_200M_050219_1,6478,STMSTNGIPR True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6479 33.616 622.0 370720.0 25 0 62236.0 + 34756 SQALREMRWW 10 135 454.89663001678 1361.66806065054 3 454.8962890505791 MULTI CID FTMS 0 0 0 6475 242718.921875 0.1568590958379113 -4 0.1251907348632812 4 Unmodified _SQALREMRWW_ REV__ENST00000398117.1_1_18:60791148-60791340:-|nuORF 21.53697664764585 0.484802182336468 3 [VP]YVPET 7 -1 49.979 0.0 0.0 3.6704 0.0 0.0 0.0 573.2401791410274 573.2401791410274 23.90887598185621 0.0 0.0 0.0 0 1.1505149978319906 1.6989700043360187 0.3252574989159953 0.0 [VP]YVPET 3.6704 - 1332 1 2.14 182714.4 1.0 1481 4996 6475 HBL1_DMSO_200M_050219_1,6479 HBL1_DMSO_200M_050219_1,6479,SQALREMRWW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6481 33.622 91.0 701630.0 25 0 58208.0 + 45342 YSNRDTDY 8 86 517.2147627749648 1032.4149726167295 2 517.2148315310478 MULTI CID FTMS 0 0 0 6480 549302.1875 0.924625363994566 -1 0.02685546875 1 Unmodified _YSNRDTDY_ REV__ENSG00000107554|ENST00000324109|DNMBP 8.593279151180031 0.7721714526254883 3 KTT 3 -1 20.005 0.0 0.0 1.9377 0.0 0.0 62.85215184303531 636.3496867526325 699.2018385956678 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 KTT 1.9377 - 118 + 1 2.14 52164.6 1.0 1482 4997 6480 HBL1_DMSO_200M_050219_1,6481 HBL1_DMSO_200M_050219_1,6481,YSNRDTDY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6482 33.624 94.0 493130.0 25 0 44612.0 + -1 VPCNKNALC 9 77 359.17207638591896 1074.494399757957 3 359.1720458865166 MULTI CID FTMS 0 0 0 6480 404077.3125 1.0 0 0.0 2 2 Carbamidomethyl (C) _VPC(Carbamidomethyl (C))NKNALC(Carbamidomethyl (C))_ REV__ENSG00000119508|ENST00000395097|NR4A3;REV__ENSG00000153234|ENST00000339562|NR4A2;REV__nc|ENSG00000119508|Q92570-2|NR4A3;REV__nc|ENSG00000119508|Q92570-3|NR4A3;REV__nc|ENSG00000153234|P43354-2|NR4A2 5.296884461304476 0.7297726132274777 3 [VP]AQS 5 -1 22.263 0.0 0.0 2.0719 0.0 0.0 0.0 589.2263887994749 589.2263887994749 3.0546218740408904 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 [VP]AQS 2.0719 - 27 + 1 2.14 46281.8 1.0 1483 4997 6480 HBL1_DMSO_200M_050219_1,6482 HBL1_DMSO_200M_050219_1,6482,VPCNKNALC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6483 33.636 706.0 277770.0 25 0 34171.0 + -1 AFVVCSVDRS 10 202 380.5216613071804 1138.5431545217411 3 380.5216552615166 MULTI CID FTMS 0 0 0 6480 227885.890625 1.0 0 0.0 3 Carbamidomethyl (C) _AFVVC(Carbamidomethyl (C))SVDRS_ REV__ENSG00000074855|ENST00000159087|ANO8;REV__nc|ENSG00000074855|Q9HCE9-2|ANO8 10.898955630103616 0.6646681216928481 3 YT{M(Oxidation (M))|F}Q 4 -1 28.928 0.0 0.0 2.5408 0.0 0.0 0.0 596.2791967628934 596.2791967628934 15.656753288559813 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YT{M(Oxidation (M))|F}Q 2.5408 - 745 + 1 2.14 154416.1 1.0 1484 4997 6480 HBL1_DMSO_200M_050219_1,6483 HBL1_DMSO_200M_050219_1,6483,AFVVCSVDRS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6485 33.641 64.0 699260.0 25 0 63115.0 28558 PTQVREKV 8 69 478.7800415006206 955.5455300680412 2 478.7796813845634 MULTI CID FTMS 0 0 0 6484 762997.375 0.4945330575907763 5 -0.203216552734375 1 Unmodified _PTQVREKV_ ENSG00000074621|ENST00000261892|SLC24A1;ENST00000434116.6_1_15:65916409-65944223:+|nuORF;nc|ENSG00000074621|O60721-2|SLC24A1;nc|ENSG00000074621|O60721-3|SLC24A1 15.847184025352805 0.6768015514314958 3 V 1 7 16.99 0.0 0.0 1.778 0.0 0.0 838.466060318821 0.0 838.466060318821 0.0 11.505149978319906 0.0 0.0 0 0.5 0.0 0.0 0.0 + V 1.778 + + 24 + 1 2.1 42638.8 1.0 1485 4998 6484 HBL1_DMSO_200M_050219_1,6485 HBL1_DMSO_200M_050219_1,6485,PTQVREKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6486 33.655 800.0 146030.0 25 0 16930.0 + 11154 GEKPDTHLGGG 11 149 534.2586012654156 1066.502649597631 2 534.2587158083916 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _GEKPDTHLGGG_ REV__ENSG00000131269|ENST00000373394|ABCB7;REV__nc|ENSG00000131269|O75027-2|ABCB7;REV__nc|ENSG00000131269|O75027-3|ABCB7 7.608950283845883 0.8392484121837455 3 SHV{[QG]|[NA]} 5 -1 27.435 0.0 0.0 2.5724 0.0 0.0 540.254198142775 0.0 540.254198142775 0.0 15.463154366298834 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.0 SHV{[QG]|[NA]} 2.5724 - 321 1 2.1 91560.9 0.959999978542328 1486 4998 6484 HBL1_DMSO_200M_050219_1,6486 HBL1_DMSO_200M_050219_1,6486,GEKPDTHLGGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6487 33.666 607.0 197720.0 25 0 22214.0 -1 VPAPWAFGAC 10 133 538.2550020272704 1074.4954511213407 2 538.2550536990166 MULTI CID FTMS 0 0 0 6484 304882.6875 0.889752455147794 2 -0.1210670471191406 3 Carbamidomethyl (C) _VPAPWAFGAC(Carbamidomethyl (C))_ ENST00000462641.1_1_22:36907036-36908721:-|nuORF 18.13498045792455 0.5432546531930572 3 VPAQSR 6 -1 71.191 0.0 0.0 6.6255 0.0 0.0 0.0 433.12302576236567 433.12302576236567 32.34373489186524 0.0 0.0 0.0 0 1.031234684152075 1.6989700043360187 0.0 0.4247425010840047 VPAQSR 6.6255 - 927 + 1 2.1 104186.6 1.0 1487 4998 6484 HBL1_DMSO_200M_050219_1,6487 HBL1_DMSO_200M_050219_1,6487,VPAPWAFGAC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6488 33.679 787.0 268730.0 25 0 30392.0 -1 HQRMHTGRNPI 11 109 681.8413972940156 1361.668241654831 2 681.8422119021416 MULTI CID FTMS 0 0 0 6484 183931.28125 0.3269492382758405 -2 0.0476722717285156 4 Oxidation (M) _HQRM(Oxidation (M))HTGRNPI_ ENSG00000204524|ENST00000414468|ZNF805;nc|ENSG00000204524|Q5CZA5-2|ZNF805 28.49450938151212 0.4231428536161201 3 HQVDPTE[VP]{[QG]|[NA]}R 12 -1 + 85.869 0.0 0.0 6.3061 6.3061 86.373 0.0 0.0 0.0 57.57540445172717 4.545059004810028 4.545059004810028 6.989700043360188 0 2.1861818737241734 0.0 0.805462187404089 1.610924374808178 HQVDPTE[VP]{[QG]|[NA]}R;HQVDPTE[VP]{[NV]|[RG]}Q 6.3061;5.7928 -;- 301 + 1 2.1 154247.5 1.0 1488 4998 6484 HBL1_DMSO_200M_050219_1,6488 HBL1_DMSO_200M_050219_1,6488,HQRMHTGRNPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6489 33.693 800.0 304670.0 25 0 16829.0 -1 0 88 628.7852740989056 2511.111990529222 4 629.0365478396416 MULTI CID FTMS 0 0 0 6484 169986.75 0.6026547904874605 -2 0.0476722717285156 5 3 [RD]{[DS]|[MA]|[CV]|TT}RDD 7 -1 29.481 0.0 0.0 1.174 0.0 0.0 0.0 1648.7271666874085 1648.7271666874085 18.683947707303616 0.0 0.0 0.0 0 1.0 0.0 0.0 0.3494850021680094 [RD]{[DS]|[MA]|[CV]|TT}RDD 1.174 - 43 1 2.1 180172.8 0.9900000095367432 1489 4998 6484 HBL1_DMSO_200M_050219_1,6489 HBL1_DMSO_200M_050219_1,6489, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6490 33.707 800.0 237250.0 25 0 20958.0 + 18460 KYHVSEKPY 9 147 575.7996554171409 1149.5847579010815 2 575.7992431521416 MULTI CID FTMS 0 0 0 6484 155664.640625 0.860815859448323 -1 0.0208168029785156 6 Unmodified _KYHVSEKPY_ ENSG00000165264|ENST00000379847|NDUFB6 51.487983226225225 0.0371074584807926 3 [{I|L}T]DVVESKPY 10 5 + 86.574 0.0 0.0 7.5309 7.5309 83.903 0.0 0.0 0.0 9.01838936139488 16.53212513775344 9.01838936139488 2.218487496163561 0 1.5994850021680094 1.3010299956639813 1.9255872241892045 0.0 [{I|L}T]DVVESKPY;[{I|L}T]DVVSEKPY;{NN|[MP]|[D{I|L}]|[EV]}TVVESKPY;{NN|[MP]|[D{I|L}]|[EV]}TVVSEKPY;{[TV]|[{I|L}S]}EVVESKPY;[HV]YKESKPY;{[TV]|[{I|L}S]}EVVSEKPY;[{I|L}T]DVSVEKPY;[HV]YKSEKPY;[YK]HVESKPY 7.5309;7.3379;6.7464;6.5535;6.5031;6.4022;6.3101;6.2356;6.2092;5.5755 -;-;-;-;-;-;-;-;-;- 2826 1 2.1 142887.9 1.0 1490 4998 6484 HBL1_DMSO_200M_050219_1,6490 HBL1_DMSO_200M_050219_1,6490,KYHVSEKPY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6492 33.718 518.0 313270.0 25 0 28660.0 + 39575 VCRNRIRV 8 214 339.20163531866143 1014.5830765561844 3 339.2010986208916 MULTI CID FTMS 0 0 0 6491 153441.25 0.098835373358306 7 -0.2689552307128906 1 Unmodified _VCRNRIRV_ REV__ENSG00000120333|ENST00000476371|MRPS14 10.823927491677226 0.7510103885582552 3 Y 1 -1 16.99 0.0 0.0 1.6745 0.0 0.0 833.5085048782531 0.0 833.5085048782531 0.0 4.273174902439578 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.6745 - 67 + 1 2.1 130528.7 1.0 1491 4999 6491 HBL1_DMSO_200M_050219_1,6492 HBL1_DMSO_200M_050219_1,6492,VCRNRIRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6493 33.72 85.0 796540.0 25 0 126030.0 + 26160 NPYNGGGRV 9 73 467.2309816323706 932.4474103315412 2 467.2307006716728 MULTI CID FTMS 0 0 0 6491 682921.4375 0.4709306104252448 -2 0.0914840698242187 2 Unmodified _NPYNGGGRV_ ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14 52.268347100219714 0.0353964759249114 3 NPYNG 5 4 59.751 0.0 0.0 6.4079 0.0 0.0 0.0 384.20050989322505 384.20050989322505 49.29297219607513 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.0 0.4247425010840047 + NPYNG 6.4079 + + 127 + 1 2.1 58960.1 1.0 1492 4999 6491 HBL1_DMSO_200M_050219_1,6493 HBL1_DMSO_200M_050219_1,6493,NPYNGGGRV True True NPYNGGGRV 33.719995 467.230700671673 11912429.0 6491.0 nc|ENSG00000173193|Q460N5-1|PARP14;;ENSG00000173193|ENST00000474629|PARP14;;nc|ENSG00000173193|Q460N5-4|PARP14 6.548624674479167 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6494 33.725 260.0 564810.0 25 0 44187.0 -1 0 59 503.22908782942005 2511.1090568141003 5 503.4292480349541 MULTI CID FTMS 0 0 0 6491 305599.46875 1.0 0 0.0 3 3 P 1 -1 3.9794 0.0 0.0 0.15847 0.0 0.0 1642.6334841596065 768.4034517877561 2411.0369359473625 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.15847 - 12 + 1 2.1 117551.9 1.0 1493 4999 6491 HBL1_DMSO_200M_050219_1,6494 HBL1_DMSO_200M_050219_1,6494, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6495 33.738 746.0 164490.0 25 0 14496.0 -1 0 129 568.3035360969029 1701.8887788909087 3 568.3041259646416 MULTI CID FTMS 0 0 0 6491 197386.1875 1.0 0 0.0 4 3 {I|L}AKAD{[SA]|[TG]}TADK{I|L}AADNK 17 -1 + 134.26 0.0 0.0 7.8888 7.8888 82.167 0.0 0.0 0.0 99.05964899465673 16.77073257353777 16.77073257353777 0.7058107428570679 0 2.473197507588033 1.5228787452803376 0.3252574989159953 0.6109243748081782 {I|L}AKAD{[SA]|[TG]}TADK{I|L}AADNK;{I|L}AKAD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}AADNK;{I|L}AKAD[WC(Carbamidomethyl (C))]VK{I|L}AADNK;{I|L}AKAD{[SA]|[TG]}TADK{I|L}AADGGK;{I|L}AKAD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}AADGGK;{I|L}AQW{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}AADNK;{I|L}AKW{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}AADNK;{I|L}AKAD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AAH{M(Oxidation (M))|F}AADNK;{I|L}AQAD{[SA]|[TG]}{[MG]|[TS]}VK{I|L}AADNK;{I|L}AKAD[WC(Carbamidomethyl (C))]VK{I|L}AADGGK 7.8888;7.8474;7.4531;7.3601;7.3177;7.2036;7.2036;7.1129;6.964;6.9225 -;-;-;-;-;-;-;-;-;- 29574 + 1 2.1 95560.2 1.0 1494 4999 6491 HBL1_DMSO_200M_050219_1,6495 HBL1_DMSO_200M_050219_1,6495, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6496 33.743 308.0 248970.0 25 0 24377.0 + 19652 LGGVRCPE 8 115 415.7113431890067 0 415.7114135622978 PEAK CID FTMS 0 0 0 6491 132075.46875 1.0 0 0.0 5 Unmodified _LGGVRCPE_ REV__ENST00000439974.3_1_10:33247495-33247750:-|nuORF 19.438996006549623 0.4285751805470146 3 Y 1 -1 10.797 0.0 0.0 1.3018 0.0 0.0 170.10553442313216 493.2176007407117 663.3231351638439 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 Y 1.3018 - 156 + 1 2.1 66897.0 1.0 1495 4999 6491 HBL1_DMSO_200M_050219_1,6496 HBL1_DMSO_200M_050219_1,6496,LGGVRCPE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6497 33.757 800.0 182610.0 25 0 9800.0 + 37114 TGYKWAEK 8 145 512.7565266047284 1023.4985002762568 2 512.7568237185478 MULTI CID FTMS 0 0 0 6491 130139.3125 0.2188272004874622 -6 0.2083854675292968 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))TGYKWAEK_ REV__ENST00000464874.1_1_7:105515663-105517004:-|nuORF 41.8396318013385 0.2035142800366642 3 {[SA]|[TG]}PHVDAAEK 10 -1 + 85.019 0.0 0.0 8.3067 8.3067 87.01 0.0 0.0 0.0 3.136191229720012 10.856327352249622 3.136191229720012 3.136191229720012 0 3.1237125054200234 0.7695510786217261 1.3001648626366045 0.0 {[SA]|[TG]}PHVDAAEK;[PS]AHVDAAEK;[PG]THVDAAEK;[TA][YR]DAAEK;{[SA]|[TG]}PHT[PS]AEK;{[SA]|[TG]}V[WY]AAEK;{[QV]|[N{I|L}]|[RA]|[KV]}[YT]DAAEK;[PS]AHT[PS]AEK;[HV]DA[PS]AAEK;[HV]QE[PS]AEK 8.3067;8.0003;7.6066;6.0195;5.2534;5.1947;5.0261;4.947;4.8128;4.565 -;-;-;-;-;-;-;-;-;- 1055 1 2.1 117825.2 0.9200000166893004 1496 4999 6491 HBL1_DMSO_200M_050219_1,6497 HBL1_DMSO_200M_050219_1,6497,TGYKWAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6499 33.775 800.0 193840.0 25 0 21597.0 19299 LEKSQSPQ 8 163 458.7402758422632 915.4659987513264 2 458.7415649294853 MULTI CID FTMS 0 0 0 6498 140026.046875 0.0931197686503944 20 -0.6032829284667969 1 Unmodified _LEKSQSPQ_ ENSG00000212916|ENST00000418460|MAP10 23.1484247019978 0.5573009939494978 3 PQ 2 6 20.247 0.0 0.0 2.2117 0.0 0.0 672.3437128399967 0.0 672.3437128399967 0.0 0.640274682471464 0.0 0.0 0 0.0 0.0 0.0 0.4049471895720985 + PQ 2.2117 + + 715 + 1 2.098 124653.1 0.8100000023841858 1497 5000 6498 HBL1_DMSO_200M_050219_1,6499 HBL1_DMSO_200M_050219_1,6499,LEKSQSPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6500 33.779 256.0 562100.0 25 0 69670.0 + 34783 SQDPGTHVV 9 132 470.23010219428033 938.4456514553608 2 470.2303649783134 MULTI CID FTMS 0 0 0 6498 235096.859375 0.0089142556730269 -7 0.2587852478027344 2 Unmodified _SQDPGTHVV_ ENSG00000130935|ENST00000253247|NOL11 54.773552608820026 0.0299037012502309 3 {[QS]|[NT]}D 3 6 45.448 0.0 0.0 4.843 0.0 0.0 0.0 605.3049743843563 605.3049743843563 28.726255669525333 0.0 0.0 0.0 0 1.0 1.154901959985743 0.5387254899964358 0.805462187404089 + {[QS]|[NT]}D 4.843 + + 414 1 2.098 116192.9 1.0 1498 5000 6498 HBL1_DMSO_200M_050219_1,6500 HBL1_DMSO_200M_050219_1,6500,SQDPGTHVV True True SQDPGTHVV 33.779276 470.230364978313 682988320.0 6498.0 ENSG00000130935|ENST00000253247|NOL11 7.385316054026286 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6501 33.793 800.0 247370.0 25 0 20066.0 -1 0 172 426.479805956807 1701.890117960828 4 426.4796020388603 MULTI CID FTMS 0 0 0 6498 190589.625 1.0 0 0.0 3 3 {I|L}AKAD{[SA]|[TG]}TADK{I|L}AADNK 17 -1 + 121.68 0.0 0.0 7.1499 7.1499 88.524 0.0 0.0 0.0 91.59989016629402 15.463535710336942 15.463535710336942 6.726410656136693 0 1.0669015600442575 0.958607314841775 0.8494850021680094 1.3737125054200234 {I|L}AKAD{[SA]|[TG]}TADK{I|L}AADNK;{I|L}AKAD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}AADNK;{I|L}AKAD{[SA]|[TG]}TADK{I|L}AADGGK;{I|L}AKAD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WK{I|L}AADNK;{I|L}AQAD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WK{I|L}AADNK;{I|L}AQW{[SA]|[TG]}TWK{I|L}AADNK;{I|L}AKW{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}AADNK;{I|L}AQW{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}AADNK;{I|L}AKAD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}AADGGK;{I|L}AQA{[WS]|[C(Carbamidomethyl (C)){I|L}]}TWK{I|L}AADNK 7.1499;6.7547;6.6211;6.5373;6.5373;6.5373;6.3604;6.3604;6.225;6.0382 -;-;-;-;-;-;-;-;-;- 26589 + 1 2.098 155730.4 0.8100000023841858 1499 5000 6498 HBL1_DMSO_200M_050219_1,6501 HBL1_DMSO_200M_050219_1,6501, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6502 33.798 255.0 286320.0 25 0 18243.0 + 5751 DPPASASQV 9 112 436.21117132598727 0 436.2104675173759 PEAK CID FTMS 0 0 0 6498 185789.859375 0.7673181620890633 -3 0.1418838500976562 4 Unmodified _DPPASASQV_ ENSG00000130816|ENST00000359526|DNMT1 48.345845343767074 0.036192834052621 3 SASAP 5 6 29.949 0.0 0.0 3.4407 0.0 0.0 245.1374172595933 209.05661951236564 454.19403677195896 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1989700043360187 0.0 SASAP 3.4407 - 180 + 1 2.098 63093.5 1.0 1500 5000 6498 HBL1_DMSO_200M_050219_1,6502 HBL1_DMSO_200M_050219_1,6502,DPPASASQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6503 33.805 429.0 318940.0 25 0 40275.0 + 26679 NYLPQSREK 9 130 378.86818115009856 1133.5827140504955 3 378.8676940798759 MULTI CID FTMS 0 0 0 6498 173423.53125 0.772881915369577 -3 0.1418838500976562 5 Unmodified _NYLPQSREK_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 27.088373467376528 0.1865245257266215 3 [YN]{I|L}PQS{[RE]|[WV]}K 9 0 + 62.441 0.0 0.0 5.5083 5.5083 86.148 0.0 0.0 0.0 44.9166888079244 1.8454027539217108 1.8454027539217108 9.208187539523747 0 0.7134679910804405 2.0 0.3054621874040891 0.5418727718234408 + + [YN]{I|L}PQS{[RE]|[WV]}K;[YN]{I|L}P[AG]S{[RE]|[WV]}K;[YN][K{I|L}]QP{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]{I|L}P{[NV]|[RG]}{[WT]|[RM]}K;[YN]{I|L}P{[NV]|[RG]}[KT]W;[QP][RH]QP{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN][Q{I|L}]KP{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN][Q{I|L}]PK{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN][K{I|L}][AG]P{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[QP][RH][AG]P{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 5.5083;4.696;4.2195;4.0106;3.892;3.6486;3.5793;3.4465;3.4072;2.8363 +;-;-;-;-;-;-;-;-;- + 218 + 1 2.098 111627.1 1.0 1501 5000 6498 HBL1_DMSO_200M_050219_1,6503 HBL1_DMSO_200M_050219_1,6503,NYLPQSREK False True NYLPQSREK 33.805461 378.867694079876 1083316.5 6498.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 3.480593681335449 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6504 33.812 357.0 180570.0 25 0 16489.0 + -1 TPVHDWAGGC 10 95 550.2359562851072 1098.4573596370144 2 550.2366210818291 MULTI CID FTMS 0 0 0 6498 118625.9453125 0.8292600300396834 -2 0.1210670471191406 6 Carbamidomethyl (C) _TPVHDWAGGC(Carbamidomethyl (C))_ REV__ENST00000490199.2_1_9:35829937-35842629:+|nuORF 19.256988751693697 0.5244284437930726 3 TPYV 4 -1 57.357 0.0 0.0 5.2216 0.0 0.0 0.0 635.2036837213499 635.2036837213499 46.24768423031375 0.0 0.0 0.0 0 0.5418727718234408 2.0 0.0 0.0 TPYV 5.2216 - 86 + 1 2.098 58637.8 1.0 1502 5000 6498 HBL1_DMSO_200M_050219_1,6504 HBL1_DMSO_200M_050219_1,6504,TPVHDWAGGC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6506 33.816 4.9 7986100.0 25 0 1312200.0 + 17605 KPTAAFHLL 9 46 499.2931404244984 996.5717279157968 2 499.2934142947197 MULTI CID FTMS 0 0 0 6505 11497666.0 0.0507226900715315 9 -0.3696937561035156 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 3 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3519550409992 667.3519550409992 27.91000098699497 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 11 + 1 2.098 37933.7 1.0 1503 5001 6505 HBL1_DMSO_200M_050219_1,6506 HBL1_DMSO_200M_050219_1,6506,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6507 33.818 14.0 4120800.0 25 0 652720.0 20992 LNREGPKAL 9 77 333.1980440440732 996.5723027324194 3 333.1976196169853 MULTI CID FTMS 0 0 0 6505 3777256.0 0.0484320118594354 8 -0.3178367614746094 2 Unmodified _LNREGPKAL_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 18.1463463914782 0.3454829746528889 3 [KP]{[SA]|[TG]}QTPR{I|L} 9 8 + 44.204 0.0 0.0 4.4356 4.4356 82.509 0.0 0.0 0.0 5.787268505095042 39.599549814380666 5.787268505095042 9.208187539523747 0 0.3807196863200844 0.0 0.3807196863200844 0.4247425010840047 [KP]{[SA]|[TG]}QTPR{I|L};[KP]{[SA]|[TG]}[AG]TPR{I|L};{[VA]|[{I|L}G]}{[NV]|[RG]}QTPR{I|L};[KP]{[SA]|[TG]}[WP]KA{I|L};{[VA]|[{I|L}G]}{[NV]|[RG]}QTP[VG]{I|L};{[VA]|[{I|L}G]}{[NV]|[RG]}[AG]TPR{I|L};[KP]{[SA]|[TG]}[WP]AK{I|L};{[VA]|[{I|L}G]}{[NV]|[RG]}QEPK{I|L};{[VA]|[{I|L}G]}{[NV]|[RG]}[AG]EPK{I|L} 4.4356;3.5116;2.8593;2.0708;1.9353;1.9353;1.8969;1.5711;0.64708 -;-;-;-;-;-;-;-;- 151 1 2.098 50431.2 1.0 1504 5001 6505 HBL1_DMSO_200M_050219_1,6507 HBL1_DMSO_200M_050219_1,6507,LNREGPKAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6509 33.823 146.0 510540.0 25 0 81478.0 -1 0 85 464.2528603314979 463.2455838648979 1 464.2534362673759 MULTI CID FTMS 0 0 0 6508 245022.28125 0.8779761131590381 1 -0.0216522216796875 1 3 E 1 -1 13.099 0.0 0.0 2.8276 0.0 0.0 316.1926491498573 0.0 316.1926491498573 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 E 2.8276 - 17 + 1 2.098 61309.2 1.0 1505 5002 6508 HBL1_DMSO_200M_050219_1,6509 HBL1_DMSO_200M_050219_1,6509, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6510 33.828 287.0 264680.0 25 0 34623.0 + + 45355 YSQNQQSY 8 110 509.21725046095816 1016.4199479887164 2 509.2167236208916 MULTI CID FTMS 0 0 0 6508 231659.453125 0.0534801798109651 -5 0.2023811340332031 2 Unmodified _YSQQNQSY_ ENSG00000270647|ENST00000605844|TAF15;nc|ENSG00000270647|Q92804-2|TAF15 52.268347100219714 0.1285778651304833 3 [AG]SYNQQSY 9 -1 + 46.272 0.0 0.0 4.5524 4.5524 74.55 0.0 0.0 0.0 5.93315204563261 8.824995917031941 5.93315204563261 2.218487496163561 0 0.7429928190999391 1.6989700043360187 0.850576203518622 0.3807196863200844 [AG]SYNQQSY;[AG]SYQNQSY;{[{M(Oxidation (M))|F}C]|[YS]}QNQQSY;{[{M(Oxidation (M))|F}C]|[YS]}QQNQSY;[AG]SYN[AG]QSY;[AG]SYGGQQSY;[AG]SYNQ[AG]SY;GGTYNQQSY;[AG]NYSQQSY;{[QS]|[NT]}YNQQSY 4.5524;4.3342;3.9687;3.7504;3.6465;3.6465;3.6465;3.6267;3.6099;3.5686 -;-;-;+;-;-;-;-;-;- + 1466 1 2.098 65432.2 1.0 1506 5002 6508 HBL1_DMSO_200M_050219_1,6510 HBL1_DMSO_200M_050219_1,6510,YSQQNQSY False False YSQNQQSY 33.828076 509.216723620892 21289724.0 6508.0 ENSG00000270647|ENST00000605844|TAF15;;nc|ENSG00000270647|Q92804-2|TAF15 2.376918156941732 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6511 33.831 123.0 575520.0 25 0 75145.0 3213 AWLFQLEK 8 86 517.7865055958047 1033.5584582584092 2 517.7867919802666 MULTI CID FTMS 0 0 0 6508 563793.8125 0.0023155393224619 156 -7.543796539306641 3 Unmodified _AWLFQLEK_ ENST00000311956.8_1_11:46700310-46700529:-|nuORF 23.1484247019978 0.5573009939494978 3 KTT[{I|L}P][WP]K 8 7 49.108 0.0 0.0 4.7513 0.0 0.0 63.99788590258601 0.0 63.99788590258601 0.0 27.14816749052117 0.0 0.0 0 1.6861818737241734 0.0 1.3494850021680094 0.2887254899964357 KTT[{I|L}P][WP]K 4.7513 - 333 + 1 2.098 59218.0 1.0 1507 5002 6508 HBL1_DMSO_200M_050219_1,6511 HBL1_DMSO_200M_050219_1,6511,AWLFQLEK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6512 33.839 489.0 233410.0 25 0 50345.0 -1 0 139 506.27962602423713 505.27234955763714 1 506.2793456912041 MULTI CID FTMS 0 0 0 6508 150955.109375 0.7104296929088342 -16 0.5260543823242188 4 3 V 1 -1 9.8329 0.0 0.0 1.9461 0.0 0.0 388.1929026966004 0.0 388.1929026966004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.9461 - 32 + 1 2.098 90725.3 1.0 1508 5002 6508 HBL1_DMSO_200M_050219_1,6512 HBL1_DMSO_200M_050219_1,6512, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6514 33.844 102.0 573910.0 25 0 93638.0 + 4205 DAPKDYRQV 9 90 364.52117959176223 1090.5417093754868 3 364.5206176638603 MULTI CID FTMS 0 0 0 6513 295595.09375 0.0137164207190252 21 -0.6291694641113281 1 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 22.736283301280096 0.2418982879461534 3 {[DA]|[EG]}PKD 5 4 46.026 0.0 0.0 4.2204 0.0 0.0 0.0 561.2796556700874 561.2796556700874 34.916440611282624 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {[DA]|[EG]}PKD 4.2204 + + 47 + 1 2.098 54791.9 1.0 1509 5003 6513 HBL1_DMSO_200M_050219_1,6514 HBL1_DMSO_200M_050219_1,6514,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6515 33.847 154.0 898520.0 25 0 111010.0 + 27496 PKHATAKN 8 123 433.7460767657013 865.4776005982026 2 433.7455627322197 MULTI CID FTMS 0 0 0 6513 346511.0625 0.0320027062896471 10 -0.4088859558105469 2 Unmodified _PKHATAKN_ REV__ENSG00000155966|ENST00000370460|AFF2;REV__nc|ENSG00000155966|P51816-2|AFF2;REV__nc|ENSG00000155966|P51816-3|AFF2;REV__nc|ENSG00000155966|P51816-5|AFF2;REV__nc|ENSG00000155966|P51816-6|AFF2;REV__nc|ENSG00000155966|P51816-7|AFF2 21.74664581756881 0.5868176546531598 3 [VG]PT 4 -1 37.567 0.0 0.0 4.3406 0.0 0.0 0.0 508.2645357721313 508.2645357721313 0.5396608298483443 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.6139829889124311 0.0 [VG]PT 4.3406 - 337 + 1 2.098 110178.6 1.0 1510 5003 6513 HBL1_DMSO_200M_050219_1,6515 HBL1_DMSO_200M_050219_1,6515,PKHATAKN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6516 33.85 140.0 619930.0 25 0 56381.0 + 28104 PPLPQMPHVPP 11 98 403.8879066811003 1208.6418906435008 3 403.8875305056572 MULTI CID FTMS 0 0 0 6513 315233.8125 0.0439440384881721 48 -1.8640365600585933 3 Unmodified _PPLPQMPHVPP_ REV__ENSG00000125363|ENST00000380714|AMELX;REV__nc|ENSG00000125363|Q99217-2|AMELX;REV__nc|ENSG00000125363|Q99217-3|AMELX 9.38312468134398 0.8308777417566128 3 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 -1 33.913 0.0 0.0 2.8059 0.0 0.0 0.0 394.2208260379032 394.2208260379032 16.050882846506514 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 2.8059 - 187 + 1 2.098 69673.3 1.0 1511 5003 6513 HBL1_DMSO_200M_050219_1,6516 HBL1_DMSO_200M_050219_1,6516,PPLPQMPHVPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6517 33.857 382.0 328840.0 25 0 39957.0 + 4210 DAPKDYRQV 9 101 546.2774609261191 1090.5403689190382 2 546.2769042849541 MULTI CID FTMS 0 0 0 6513 252760.953125 0.018021868090134 20 -0.5813674926757812 4 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 30.7034409873982 0.1405282614900322 3 DAPKDV 6 3 73.295 0.0 0.0 6.721 0.0 0.0 0.0 462.2097567193969 462.2097567193969 50.82055337844736 0.0 0.0 0.0 0 1.329689690656103 1.6989700043360187 0.0 0.4247425010840047 DAPKDV 6.721 - 244 + 1 2.098 100932.5 1.0 1512 5003 6513 HBL1_DMSO_200M_050219_1,6517 HBL1_DMSO_200M_050219_1,6517,DAPKDYRQV False True DAPKDYRQV 33.856513 546.276904284954 1669069056.0 6513.0 ENSG00000162063|ENST00000397066|CCNF 6.350720405578613 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6519 33.861 52.0 1000600.0 25 0 232410.0 + 3525 HQVDPTEPVGGAR 13 60 454.89663001678 1361.66806065054 3 454.8967162966728 MULTI CID FTMS 0 0 0 6518 711953.3125 0.4601056729111097 4 -0.226806640625 1 Unmodified _CTSHYRRVGQR_ nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 8.155526934196011 0.8366696279279818 3 [VP]YVPE 6 9 44.2 0.0 0.0 3.246 0.0 0.0 0.0 674.2888851957149 674.2888851957149 9.035984316004216 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.3252574989159953 0.0 [VP]YVPE 3.246 - 101 1 2.098 45509.7 1.0 1513 5004 6518 HBL1_DMSO_200M_050219_1,6519 HBL1_DMSO_200M_050219_1,6519,CTSHYRRVGQR False True HQVDPTEPVGGAR 33.861002 454.896716296673 23074993.0 6518.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 11.572187105814615 3.0 False 13.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6520 33.864 157.0 468440.0 25 0 48164.0 -1 MAPPPPRSV 9 82 484.2552669328838 966.4959809325676 2 484.2547790408134 MULTI CID FTMS 0 0 0 6518 385511.3125 0.4723486210359738 6 -0.3251190185546875 2 Oxidation (M) _M(Oxidation (M))APPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 22.736283301280096 0.2418982879461534 3 {[MS]|[{M(Oxidation (M))|F}A]}PPP 5 -1 46.823 0.0 0.0 4.8446 0.0 0.0 0.0 454.2429903619751 454.2429903619751 42.84318117920506 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}PPP 4.8446 + + 63 + 1 2.098 67511.7 1.0 1514 5004 6518 HBL1_DMSO_200M_050219_1,6520 HBL1_DMSO_200M_050219_1,6520,MAPPPPRSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6521 33.871 356.0 436440.0 25 0 109580.0 + 4079 DAMSSQQNV 9 151 490.2112205799753 978.4078882267506 2 490.2112304568291 MULTI CID FTMS 0 0 0 6518 355250.75 0.9938820603355428 -1 0.0172271728515625 3 Unmodified _DAMSSQQNV_ ENSG00000003393|ENST00000264276|ALS2;ENST00000482789.5_1_2:202606311-202633608:-|nuORF;ENST00000482891.5_1_2:202587756-202633608:-|nuORF;nc|ENSG00000003393|Q96Q42-2|ALS2;nc|ENSG00000003393|Q96Q42-3|ALS2 57.47134341890925 0.0274820932774257 3 {[DA]|[EG]}M{I|L}DM 6 6 42.88 0.0 0.0 4.3827 0.0 0.0 0.0 299.13125183442565 299.13125183442565 20.40144297218646 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 {[DA]|[EG]}M{I|L}DM 4.3827 - 475 1 2.098 120394.2 1.0 1515 5004 6518 HBL1_DMSO_200M_050219_1,6521 HBL1_DMSO_200M_050219_1,6521,DAMSSQQNV True True DAMSSQQNV 33.870509 490.211230456829 2162931.25 6518.0 ENST00000482789.5_1_2:202606311-202633608:-|nuORF;;ENST00000482891.5_1_2:202587756-202633608:-|nuORF;;ENSG00000003393|ENST00000264276|ALS2;;nc|ENSG00000003393|Q96Q42-3|ALS2;;nc|ENSG00000003393|Q96Q42-2|ALS2 7.51394001642863 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6522 33.873 111.0 616840.0 25 0 189850.0 + -1 SGRQRWCLQER 11 54 492.5819416075099 1474.7239954227298 3 492.5819885134697 MULTI CID FTMS 0 0 0 6518 264902.21875 0.4957544711862087 -1 0.0172271728515625 4 Carbamidomethyl (C) _SGRQRWC(Carbamidomethyl (C))LQER_ REV__ENST00000441363.1_1_6:74009094-74009619:+|nuORF 1.214830529360525 0.8694162858786273 3 R 1 -1 15.485 0.0 0.0 1.05 0.0 0.0 1300.6122533346422 0.0 1300.6122533346422 0.0 3.718553028398688 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.05 + + 35 + 1 2.098 62847.0 1.0 1516 5004 6518 HBL1_DMSO_200M_050219_1,6522 HBL1_DMSO_200M_050219_1,6522,SGRQRWCLQER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6523 33.877 217.0 370550.0 25 0 27729.0 33215 SFLRAQER 8 96 503.7748672661611 1005.5351815991222 2 503.7748596072197 MULTI CID FTMS 0 0 0 6518 231029.90625 0.2046493513798589 -4 0.0993766784667968 5 Unmodified _SFLRAQER_ ENSG00000122406|ENST00000370321|RPL5 18.1463463914782 0.6428359029697936 3 HPT 3 8 35.445 0.0 0.0 3.525 0.0 0.0 0.0 667.3520391432767 667.3520391432767 21.00833760139686 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 HPT 3.525 - 110 + 1 2.098 65355.0 1.0 1517 5004 6518 HBL1_DMSO_200M_050219_1,6523 HBL1_DMSO_200M_050219_1,6523,SFLRAQER False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6524 33.891 800.0 98535.0 25 0 9098.5 -1 YDEFEYCWDTF 11 98 787.7903891179183 1573.5662253026364 2 787.7921630740166 MULTI CID FTMS 0 0 0 6518 166624.640625 1.0 0 0.0 6 Carbamidomethyl (C) _YDEFEYC(Carbamidomethyl (C))WDTF_ ENSG00000179750|ENST00000333467|APOBEC3B;nc|ENSG00000179750|Q9UH17-3|APOBEC3B 1.3295316138638542 0.8688751186870782 3 [NP]ED[QP]DEEYD 11 -1 57.255 0.0 0.0 3.6385 0.0 0.0 0.0 239.10396753482652 239.10396753482652 31.58085763786272 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.8807196863200843 0.4247425010840047 [NP]ED[QP]DEEYD 3.6385 - 937 + 1 2.098 58648.6 0.6600000262260437 1518 5004 6518 HBL1_DMSO_200M_050219_1,6524 HBL1_DMSO_200M_050219_1,6524,YDEFEYCWDTF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6525 33.897 366.0 143200.0 25 0 10089.0 + 35511 STMSTNGIPR 10 89 540.2612777208125 1078.5080025084249 2 540.2610961794853 MULTI CID FTMS 0 0 0 6518 125785.796875 0.0153790792631635 21 -0.6158180236816406 7 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 53.40400417844725 0.0601721406801337 3 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 68.906 0.0 0.0 6.389 6.389 78.14 0.0 0.0 0.0 7.269987279362624 0.6694678963061307 0.6694678963061307 0.6694678963061307 0 0.9247425010840048 0.0 0.3807196863200844 0.4247425010840047 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;[HD]T[VS]{[RE]|[WV]}[HV];{[MG]|[TS]}H[DV]{[RE]|[WV]}[HV] 6.389;6.3269;5.5393;5.4772;0.3803;0.33423 -;+;-;-;-;- + 178 + 1 2.098 46850.5 1.0 1519 5004 6518 HBL1_DMSO_200M_050219_1,6525 HBL1_DMSO_200M_050219_1,6525,STMSTNGIPR True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6526 33.911 800.0 130600.0 25 0 13446.0 + -1 CCHRRCMQYHV 11 113 811.8321116160577 1621.6496702989152 2 811.8337890505791 MULTI CID FTMS 0 0 0 6518 105569.9375 0.1386143740775079 -3 0.0445747375488281 8 3 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))HRRC(Carbamidomethyl (C))M(Oxidation (M))QYHV_ REV__ENSG00000177483|ENST00000316997|RBM44 0.3070304955306653 0.8736993455979228 3 {[YD]|[{M(Oxidation (M))|F}M]}GSYSG{[QS]|[NT]}Q 10 -1 71.375 0.0 0.0 4.4014 0.0 0.0 0.0 546.2133659378402 546.2133659378402 24.94194230624037 0.0 0.0 0.0 0 1.2887254899964358 1.6989700043360187 2.368415180652539 0.4247425010840047 {[YD]|[{M(Oxidation (M))|F}M]}GSYSG{[QS]|[NT]}Q 4.4014 - 8183 1 2.098 76345.7 0.5199999809265137 1520 5004 6518 HBL1_DMSO_200M_050219_1,6526 HBL1_DMSO_200M_050219_1,6526,CCHRRCMQYHV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6527 33.921 560.0 286660.0 25 0 37234.0 45378 YSYYCDQN 8 115 528.1910034116496 1054.3674538900991 2 528.1898681521416 MULTI CID FTMS 0 0 0 6518 103778.0859375 0.2970272090048587 -2 0.03887939453125 9 Unmodified _YSYYCDQN_ ENSG00000134365|ENST00000608469|CFHR4;ENSG00000134365|ENST00000608469|CFHR4;nc|ENSG00000134365|Q92496-2|CFHR4;nc|ENSG00000134365|Q92496-2|CFHR4;nc|ENSG00000134365|Q92496-3|CFHR4 16.942295170755138 0.6606234159769251 3 YS 2 6 41.013 0.0 0.0 3.8899 0.0 0.0 0.0 801.2490710278757 801.2490710278757 28.55265951879793 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 + YS 3.8899 + + 145 + 1 2.098 128201.1 1.0 1521 5004 6518 HBL1_DMSO_200M_050219_1,6527 HBL1_DMSO_200M_050219_1,6527,YSYYCDQN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6529 33.938 800.0 101050.0 25 0 10494.0 -1 HQRMHTGRNPI 11 79 681.8413972940156 1361.668241654831 2 681.8420287966728 MULTI CID FTMS 0 0 0 6528 93000.953125 0.1653149511953714 5 -0.2606086730957031 1 Oxidation (M) _HQRM(Oxidation (M))HTGRNPI_ ENSG00000204524|ENST00000414468|ZNF805;nc|ENSG00000204524|Q5CZA5-2|ZNF805 23.78978130925829 0.5336113198261219 3 HQVD 4 -1 51.983 0.0 0.0 3.8176 0.0 0.0 0.0 879.4332559383212 879.4332559383212 40.38872836444014 0.0 0.0 0.0 0 1.424742501084005 0.0 0.5 0.3807196863200844 HQVD 3.8176 - 93 + 1 2.101 62761.1 0.9200000166893004 1522 5005 6528 HBL1_DMSO_200M_050219_1,6529 HBL1_DMSO_200M_050219_1,6529,HQRMHTGRNPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6530 33.952 800.0 156210.0 25 0 10130.0 + 43198 VYYKSTEKSGM 11 120 646.8136335133731 1291.6127140935462 2 646.8124877810478 MULTI CID FTMS 0 0 0 6528 155491.03125 0.8767402341609397 -1 0.0645103454589843 2 Unmodified _VYYKSTEKSGM_ ENSG00000218739|ENST00000402297|CEBPZOS 72.58957779350692 0.0248999445157541 3 VYYKSTEKSGM 11 0 + 112.17 0.0 0.0 8.6841 8.6841 84.117 0.0 0.0 0.0 36.57577319177794 11.524273408578878 11.524273408578878 1.249387366082999 0 1.9731975075880328 2.0 1.055462187404089 0.0 + + VYYKSTEKSGM;VYYKSETKSGM;VYYKSTEK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};VYYKSETK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};VYYK[WM]KSGM;VYYKSEPY{I|L}M;VYYKSTE{M(Oxidation (M))|F}QQ;VYYKSET{M(Oxidation (M))|F}QQ;VYYKSTE[QA]{[CT]|[{M(Oxidation (M))|F}G]};VYYKSET[QA]{[CT]|[{M(Oxidation (M))|F}G]} 8.6841;8.5874;7.7919;7.6952;7.2883;7.2873;7.1229;7.0262;6.267;6.1703 +;-;-;-;-;-;-;-;-;- + 2875 + 1 2.101 95136.2 0.6499999761581421 1523 5005 6528 HBL1_DMSO_200M_050219_1,6530 HBL1_DMSO_200M_050219_1,6530,VYYKSTEKSGM True True VYYKSTEKSGM 33.952271 646.812487781048 1000037.8125 6528.0 ENSG00000218739|ENST00000402297|CEBPZOS 10.577563285827637 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6531 33.962 552.0 321590.0 25 0 14402.0 + 27358 PHVIYLAKI 9 222 351.8870639948109 1052.6393625846326 3 352.2215759158134 MULTI CID FTMS 0 0 0 6528 119589.7265625 1.0 0 0.0 3 Unmodified _PHVIYLAKI_ REV__ENSG00000175220|ENST00000311956|ARHGAP1 7.910154910731844 0.6385446671287552 3 EG{M(Oxidation (M))|F} 3 -1 16.911 0.0 0.0 1.6066 0.0 0.0 701.4914412985914 0.0 701.4914412985914 0.0 3.592695884033452 0.0 0.0 0 0.0 0.0 0.0 0.0 EG{M(Oxidation (M))|F} 1.6066 - 200 + 1 2.101 142934.9 1.0 1524 5005 6528 HBL1_DMSO_200M_050219_1,6531 HBL1_DMSO_200M_050219_1,6531,PHVIYLAKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6532 33.976 800.0 103030.0 25 0 18465.0 -1 RVTSLCYSE 9 95 557.7648964577072 1113.5152399822143 2 557.7651855349541 MULTI CID FTMS 0 0 0 6528 113249.9140625 1.0 0 0.0 4 Carbamidomethyl (C) _RVTSLC(Carbamidomethyl (C))YSE_ ENSG00000143164|ENST00000367840|DCAF6;nc|ENSG00000143164|Q58WW2-2|DCAF6;nc|ENSG00000143164|Q58WW2-4|DCAF6;nc|ENSG00000143164|Q58WW2|DCAF6 7.289230182591677 0.6602208344931196 3 {M(Oxidation (M))|F}K 2 -1 15.969 0.0 0.0 1.4341 0.0 0.0 820.3748113706894 0.0 820.3748113706894 0.0 1.4165061435177506 0.0 0.0 0 0.0 0.0 0.0 0.1989700043360188 {M(Oxidation (M))|F}K 1.4341 - 156 + 1 2.101 68731.8 0.6000000238418579 1525 5005 6528 HBL1_DMSO_200M_050219_1,6532 HBL1_DMSO_200M_050219_1,6532,RVTSLCYSE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6534 33.98 106.0 628270.0 25 0 65466.0 + 26161 NPYNGGGRV 9 88 467.2309816323706 932.4474103315412 2 467.2322570681572 MULTI CID FTMS 0 0 0 6533 83640.34375 0.0576769097812437 5 -0.224517822265625 1 Unmodified _NPYNGGGRV_ ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14 25.399314129420983 0.2080152500878129 3 [NP]YN 4 5 27.44 0.0 0.0 2.9428 0.0 0.0 0.0 441.2234591119751 441.2234591119751 14.340700995863427 0.0 0.0 0.0 0 0.5796896906561032 0.8538719643217619 0.0 0.3807196863200844 + [NP]YN 2.9428 + + 171 + 1 2.101 54299.9 1.0 1526 5006 6533 HBL1_DMSO_200M_050219_1,6534 HBL1_DMSO_200M_050219_1,6534,NPYNGGGRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6535 33.988 421.0 302980.0 25 0 19840.0 + -1 CYCYSSQC 8 118 535.6733407134428 0 535.6731445193291 PEAK CID FTMS 0 0 0 6533 164954.421875 0.8205941312862558 -1 0.0546684265136718 2 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))YC(Carbamidomethyl (C))YSSQC_ REV__ENSG00000186281|ENST00000434632|GPAT2;REV__ENST00000471757.5_1_2:96687909-96690664:-|nuORF;REV__ENST00000482704.1_1_2:96689607-96690664:-|nuORF;REV__ENST00000484440.5_1_2:96688852-96698107:-|nuORF;REV__ENST00000486463.5_1_2:96687909-96693504:-|nuORF;REV__nc|ENSG00000186281|Q6NUI2-3|GPAT2;REV__nc|ENSG00000186281|Q6NUI2-5|GPAT2;REV__nc|ENSG00000186281|Q6NUI2|GPAT2 5.760428011301431 0.5786759180849727 3 PT 2 -1 17.831 0.0 0.0 1.6675 0.0 0.0 128.81499435099494 739.3955782525999 868.2105726035948 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 PT 1.6675 - 33 + 1 2.101 100696.4 1.0 1527 5006 6533 HBL1_DMSO_200M_050219_1,6535 HBL1_DMSO_200M_050219_1,6535,CYCYSSQC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6536 33.989 34.0 1860800.0 25 0 150650.0 + 36546 TAKPGVSTV 9 99 430.2482107886845 858.4818686441689 2 430.2479736208916 MULTI CID FTMS 0 0 0 6533 1749163.375 0.7446472568441868 -1 0.0546684265136718 3 Unmodified _TAKPGVSTV_ ENSG00000141867|ENST00000679869|BRD4;nc|ENSG00000141867|O60885-2|BRD4;nc|ENSG00000141867|O60885-3|BRD4 21.53697664764585 0.2571576504437394 3 [TA]K{M(Oxidation (M))|F}WPG 7 6 35.249 0.0 0.0 4.106 0.0 0.0 0.0 68.05139337711171 68.05139337711171 19.30606582413447 0.0 0.0 0.0 0 0.5451140161145328 1.5228787452803376 0.0 0.0 [TA]K{M(Oxidation (M))|F}WPG 4.106 - 157 + 1 2.101 54817.0 1.0 1528 5006 6533 HBL1_DMSO_200M_050219_1,6536 HBL1_DMSO_200M_050219_1,6536,TAKPGVSTV False True TAKPGVSTV 33.988889 430.247973620892 11692407.0 6533.0 nc|ENSG00000141867|O60885-3|BRD4;;ENSG00000141867|ENST00000679869|BRD4;;nc|ENSG00000141867|O60885-2|BRD4 5.249777793884277 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6537 33.992 157.0 584520.0 25 0 59759.0 + 45337 YSMAFEEY 8 120 520.2080153801204 1038.4014778270407 2 520.2082397341728 MULTI CID FTMS 0 0 0 6533 330921.96875 1.0 0 0.0 4 Unmodified _YSMAFEEY_ REV__ENSG00000151461|ENST00000357604|UPF2 14.581692164780916 0.6954967302934248 3 SY 2 -1 19.196 0.0 0.0 1.8486 0.0 0.0 770.2951068327033 0.0 770.2951068327033 0.0 8.750612633917001 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 SY 1.8486 - 51 + 1 2.101 74939.0 1.0 1529 5006 6533 HBL1_DMSO_200M_050219_1,6537 HBL1_DMSO_200M_050219_1,6537,YSMAFEEY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6538 33.998 338.0 409700.0 25 0 42008.0 17720 KPVGFTVHAI 10 115 534.811839223524 1067.609125513848 2 534.8119994997978 MULTI CID FTMS 0 0 0 6533 313760.625 0.3937720239157419 -1 0.0546684265136718 5 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 30.63653989081413 0.2803493085145199 3 KPTG 4 7 46.983 0.0 0.0 4.4007 0.0 0.0 0.0 681.3706759088499 681.3706759088499 22.95880017344075 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7302046884880937 0.0 KPTG 4.4007 - 304 + 1 2.101 110392.8 1.0 1530 5006 6533 HBL1_DMSO_200M_050219_1,6538 HBL1_DMSO_200M_050219_1,6538,KPVGFTVHAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6539 34.001 136.0 569990.0 25 0 69450.0 28077 PPHPPPPPP 9 84 466.7531945699682 931.4918362067364 2 466.7536193728447 MULTI CID FTMS 0 0 0 6533 306229.75 0.5596567272674107 -2 0.1191787719726562 6 Unmodified _PPHPPPPPP_ ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000066855|ENST00000262146|MTFR1;ENSG00000163064|ENST00000295206|EN1;ENSG00000175879|ENST00000313173|HOXD8;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000066855|Q15390-2|MTFR1;nc|ENSG00000175879|P13378-2|HOXD8;REV__nc|ENSG00000182095|O15417-2|TNRC18 45.7499826716795 0.0496882803020414 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPP{[HG]|PP} 9 2 + 46.805 0.0 0.0 5.0247 5.0247 76.073 0.0 0.0 0.0 2.2177870036582306 7.147642715192504 2.2177870036582306 2.2177870036582306 0 1.3494850021680094 0.0 0.2887254899964357 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPP{[HG]|PP};{[HG]|PP}HPPPP{[HG]|PP};[PA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPP{[HG]|PP};{[NV]|[RG]}{[QS]|[NT]}PPP{[HG]|PP};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]PP{[HG]|PP};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YK]P{[HG]|PP};{[HG]|PP}H[YK]P{[HG]|PP};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PP[YK]{[HG]|PP};{[HG]|PP}{[QS]|[NT]}GRP{[HG]|PP};{[HG]|PP}HP[YK]{[HG]|PP} 5.0247;4.7867;3.7088;3.2859;2.6527;2.2643;2.0262;1.7275;1.5342;1.4894 -;+;-;-;-;-;-;-;-;- + 210 1 2.101 65489.5 1.0 1531 5006 6533 HBL1_DMSO_200M_050219_1,6539 HBL1_DMSO_200M_050219_1,6539,PPHPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6540 34.005 246.0 258530.0 25 0 21176.0 + -1 EVFSWYKCNSC 11 96 474.863622528172 1421.569038184716 3 474.8634521365166 MULTI CID FTMS 0 0 0 6533 221826.203125 0.7212560683933678 -2 0.1191787719726562 7 Carbamidomethyl (C) _EVFSWYKCNSC(Carbamidomethyl (C))_ REV__ENST00000604238.2_1_10:74322776-74385791:-|nuORF 2.843284757254958 0.8617331327080043 3 CPYDKNHQ{I|L} 9 -1 35.955 0.0 0.0 2.5292 0.0 0.0 305.0676869153643 0.0 305.0676869153643 0.0 23.73644848383601 0.0 0.0 0 0.0 0.0 0.0 0.6989700043360187 CPYDKNHQ{I|L} 2.5292 - 239 + 1 2.101 56830.2 1.0 1532 5006 6533 HBL1_DMSO_200M_050219_1,6540 HBL1_DMSO_200M_050219_1,6540,EVFSWYKCNSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6541 34.014 473.0 151010.0 25 0 16972.0 + -1 VHPMLSCTV 9 116 530.2505581494435 1058.4865633656868 2 530.2509033083916 MULTI CID FTMS 0 0 0 6533 138308.515625 1.0 0 0.0 8 Carbamidomethyl (C),Oxidation (M) _VHPM(Oxidation (M))LSC(Carbamidomethyl (C))TV_ REV__ENSG00000204962|ENST00000531613|PCDHA8;REV__ENSG00000204965|ENST00000529859|PCDHA5;REV__ENSG00000204970|ENST00000504120|PCDHA1;REV__nc|ENSG00000204962|Q9Y5H6-2|PCDHA8;REV__nc|ENSG00000204965|Q9Y5H7-2|PCDHA5;REV__nc|ENSG00000204965|Q9Y5H7-3|PCDHA5;REV__nc|ENSG00000204970|Q9Y5I3-2|PCDHA1;REV__nc|ENSG00000204970|Q9Y5I3-3|PCDHA1 21.74664581756881 0.2544899275067181 3 EDTV 4 -1 36.983 0.0 0.0 3.4939 0.0 0.0 596.2953968732437 0.0 596.2953968732437 0.0 18.79493455131808 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 EDTV 3.4939 - 410 1 2.101 62803.7 1.0 1533 5006 6533 HBL1_DMSO_200M_050219_1,6541 HBL1_DMSO_200M_050219_1,6541,VHPMLSCTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6542 34.023 495.0 269680.0 25 0 18594.0 34795 SQDQAWAGV 9 127 481.2211628169605 0 481.2213928103447 PEAK CID FTMS 0 0 0 6533 136921.265625 1.0 0 0.0 9 Unmodified _SQDQAWAGV_ nc|ENSG00000160200|P35520-2|CBS 27.628801355627647 0.1319135480000405 3 VH[YN]DN 6 9 19.152 0.0 0.0 1.9941 0.0 0.0 117.07820400550402 98.02533899478748 215.1035430002915 0.0 0.0 0.0 0.0 0 1.5189301784845295 0.0 0.0 0.6109243748081782 VH[YN]DN 1.9941 - 39 + 1 2.101 105631.0 1.0 1534 5006 6533 HBL1_DMSO_200M_050219_1,6542 HBL1_DMSO_200M_050219_1,6542,SQDQAWAGV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6543 34.036 800.0 84349.0 25 0 8692.8 -1 0 72 830.8059642664018 1659.5973755996035 2 830.8055297732353 MULTI CID FTMS 0 0 0 6533 85714.3828125 1.0 0 0.0 10 3 DY 2 -1 44.776 0.0 0.0 2.698 0.0 0.0 0.0 1378.4838811859202 1378.4838811859202 19.089934634871284 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 DY 2.698 - 48 + 1 2.101 51326.0 0.4600000083446502 1535 5006 6533 HBL1_DMSO_200M_050219_1,6543 HBL1_DMSO_200M_050219_1,6543, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6545 34.041 2.4 19566000.0 25 0 2001700.0 + 34784 SQDPGTHVV 9 67 470.23010219428033 938.4456514553608 2 470.2304870486259 MULTI CID FTMS 0 0 0 6544 26373134.0 1.0 0 0.0 1 Unmodified _SQDPGTHVV_ ENSG00000130935|ENST00000253247|NOL11 43.85829265575387 0.0542763391141878 3 {[QS]|[NT]}D 3 6 41.584 0.0 0.0 4.4312 0.0 0.0 0.0 605.3045603599145 605.3045603599145 23.03527687626889 0.0 0.0 0.0 0 1.0 1.0457574905606752 0.2614393726401688 0.805462187404089 + {[QS]|[NT]}D 4.4312 + + 101 1 2.101 45457.8 1.0 1536 5007 6544 HBL1_DMSO_200M_050219_1,6545 HBL1_DMSO_200M_050219_1,6545,SQDPGTHVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6546 34.044 182.0 258450.0 25 0 11202.0 -1 LVYAEMEK 8 92 512.7565266047284 1023.4985002762568 2 512.7563964724541 MULTI CID FTMS 0 0 0 6544 208830.53125 0.3511452431389401 2 -0.0934333801269531 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LVYAEMEK_ ENST00000418814.6_2_6:71247997-71248084:+|nuORF 28.486842064014134 0.4448922141344407 3 HVDAAEK 7 -1 54.651 0.0 0.0 5.3396 0.0 0.0 255.12128643096588 0.0 255.12128643096588 0.0 32.832348234378074 0.0 0.0 0 2.518930178484529 0.0 0.2742275032520141 0.3054621874040891 HVDAAEK 5.3396 - 164 + 1 2.101 39584.4 1.0 1537 5007 6544 HBL1_DMSO_200M_050219_1,6546 HBL1_DMSO_200M_050219_1,6546,LVYAEMEK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6547 34.046 40.0 1597100.0 25 0 318360.0 + 36281 SYGTKETSY 9 83 518.2343292478929 1034.4541055625857 2 518.2340576052666 MULTI CID FTMS 0 0 0 6544 1209866.875 0.5952134530089997 -2 0.1153182983398437 3 Unmodified _SYGTKETSY_ ENSG00000100347|ENST00000350028|SAMM50 40.23920728925047 0.0741434193262949 3 [KT]GETSYSY 9 6 + 50.358 0.0 0.0 4.8681 4.8681 78.448 0.0 0.0 0.0 1.4954774794339087 28.702519733105163 1.4954774794339087 4.075674083184069 0 0.7059771852360797 0.0 1.4916440611282624 0.0 [KT]GETSYSY;[KT]EGTSYSY;[KT]G[WM]YSY;{[{M(Oxidation (M))|F}C]|[YS]}G[KS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SY;[KT]GET[HM][MT];[KT]GE[NP]T{[C(Carbamidomethyl (C))E]|[WC]};[KT]E[HM]TG[MT];[KT]EGT[HM][MT];[KT]EG[NP]T{[C(Carbamidomethyl (C))E]|[WC]};{[{M(Oxidation (M))|F}C]|[YS]}G[YR]TG[MT] 4.8681;4.4741;2.8916;1.9644;1.8946;1.6855;1.6596;1.5006;1.2915;1.2258 -;-;-;-;-;-;-;-;-;- 343 1 2.101 54710.1 1.0 1538 5007 6544 HBL1_DMSO_200M_050219_1,6547 HBL1_DMSO_200M_050219_1,6547,SYGTKETSY True True SYGTKETSY 34.045532 518.234057605267 18508532.0 6544.0 ENSG00000100347|ENST00000350028|SAMM50 8.396780967712402 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6548 34.047 45.0 1435300.0 25 0 143290.0 + + 2519 SAAPPPARV 9 67 433.2480203876325 0 433.2479125857353 PEAK CID FTMS 0 0 0 6544 984496.3125 0.8203794112745302 -1 0.0606498718261718 4 Unmodified _ASAPPRVPA_ nc|ENSG00000138439|Q6P1L5-2|FAM117B;ENSG00000138439|ENST00000392238|FAM117B;ENST00000481658.1_1_2:203500234-203589753:+|nuORF 19.256988751693697 0.2078072434435185 3 APP 3 -1 18.5 0.0 0.0 2.14 0.0 0.0 158.06328823444625 438.2480024530024 596.3112906874487 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 APP 2.14 + + 25 + 1 2.101 56708.0 1.0 1539 5007 6544 HBL1_DMSO_200M_050219_1,6548 HBL1_DMSO_200M_050219_1,6548,ASAPPRVPA False False SAAPPPARV 34.04677 433.247912585735 26213128.0 6544.0 nc|ENSG00000138439|Q6P1L5-2|FAM117B;;ENSG00000138439|ENST00000392238|FAM117B;;ENST00000481658.1_1_2:203500234-203589753:+|nuORF 5.242840766906738 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6549 34.049 124.0 498200.0 25 0 26303.0 -1 KFAMFITL 8 89 493.7728030529561 985.5310531727122 2 493.7726623415947 MULTI CID FTMS 0 0 0 6544 635162.8125 0.9466819338996008 -1 0.0606498718261718 5 Oxidation (M) _KFAM(Oxidation (M))FITL_ ENSG00000170522|ENST00000302274|ELOVL6 19.438996006549623 0.6237395211498085 3 {[NV]|[RG]}RNVGN[{I|L}T] 9 -1 + 35.995 0.0 0.0 3.6524 3.6524 80.718 0.0 0.0 0.0 3.65279269351241 13.560129678657717 3.65279269351241 9.208187539523752 0 0.2887254899964357 0.0 0.0 0.5994850021680094 {[NV]|[RG]}RNVGN[{I|L}T];{[NV]|[RG]}RNVGGG[{I|L}T];{[NV]|[RG]}RGGVGN[{I|L}T];[VP]{[WT]|[RM]}RN[{I|L}T];[KG]P[{I|L}P]{M(Oxidation (M))|F}N[{I|L}T];[KG]P[NS]RN[{I|L}T];[PG]K[{I|L}P]{M(Oxidation (M))|F}N[{I|L}T];[PG]K[NS]RN[{I|L}T];{[NV]|[RG]}RGGVGGG[{I|L}T];[VP]{[WT]|[RM]}RGG[{I|L}T] 3.6524;2.718;2.718;2.6896;2.3594;2.3322;2.0346;2.0074;1.7881;1.7498 -;-;-;-;-;-;-;-;-;- 449 1 2.101 51645.2 1.0 1540 5007 6544 HBL1_DMSO_200M_050219_1,6549 HBL1_DMSO_200M_050219_1,6549,KFAMFITL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6550 34.052 147.0 604190.0 25 0 99905.0 10895 GAGKGPGK 8 96 336.1950887962575 670.375624659315 2 336.1949340701103 MULTI CID FTMS 0 0 0 6544 605687.6875 1.0 0 0.0 6 Unmodified _GAGKGPGK_ ENST00000372852.3_1_1:40105296-40105449:-|nuORF 2.577480529830294 0.808687252328423 3 [AG]R[PS]A{I|L} 7 5 + 52.259 0.0 0.0 7.7955 7.7955 94.009 0.0 0.0 0.0 10.801529056782256 11.35151878060192 10.801529056782256 10.801529056782256 0 1.6549471895720984 1.2218487496163564 0.805462187404089 0.3252574989159953 [AG]R[PS]A{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[PS]A{I|L};QR[PS]A{I|L};[PG][WK]A{I|L} 7.7955;6.1842;5.6847;2.2638 -;-;-;- 85 1 2.101 72420.1 1.0 1541 5007 6544 HBL1_DMSO_200M_050219_1,6550 HBL1_DMSO_200M_050219_1,6550,GAGKGPGK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6551 34.055 114.0 552100.0 25 0 50724.0 + 34775 SQDENYHHL 9 91 381.5006650725825 1141.4801658179474 3 381.5000182986259 MULTI CID FTMS 0 0 0 6544 426979.65625 0.7807209533569001 -1 0.0606498718261718 7 Unmodified _SQDENYHHL_ ENSG00000137075|ENST00000259605|RNF38;nc|ENSG00000137075|Q9H0F5-2|RNF38;nc|ENSG00000137075|Q9H0F5-3|RNF38;nc|ENSG00000137075|Q9H0F5-4|RNF38 20.453626601364224 0.2830276176381075 3 NYH{I|L}H 5 6 19.038 0.0 0.0 1.6678 0.0 0.0 459.1616976556412 0.0 459.1616976556412 0.0 7.255117528966881 0.0 0.0 0 0.0 0.0 0.0 0.0 NYH{I|L}H 1.6678 - 94 + 1 2.101 58166.0 1.0 1542 5007 6544 HBL1_DMSO_200M_050219_1,6551 HBL1_DMSO_200M_050219_1,6551,SQDENYHHL False True SQDENYHHL 34.054645 381.500018298626 2703620.25 6544.0 nc|ENSG00000137075|Q9H0F5-2|RNF38;;nc|ENSG00000137075|Q9H0F5-3|RNF38;;ENSG00000137075|ENST00000259605|RNF38;;nc|ENSG00000137075|Q9H0F5-4|RNF38 4.346321533123652 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6552 34.058 158.0 574260.0 25 0 85840.0 + 13052 HAWDHAKSV 9 119 350.84220301516103 1049.5047796456831 3 350.8417846560478 MULTI CID FTMS 0 0 0 6544 354819.53125 0.2907247829542071 -2 0.1153182983398437 8 Unmodified _HAWDHAKSV_ ENSG00000048162|ENST00000614830|NOP16;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;ENST00000510608.1_1_5:175813700-175815552:-|nuORF;nc|ENSG00000048162|Q9Y3C1-2|NOP16;nc|ENSG00000048162|Q9Y3C1-3|NOP16 51.629811660486645 0.0367964933207742 3 [HA]WDHAKSV 9 0 + 74.386 0.0 0.0 7.0877 7.0877 86.766 0.0 0.0 0.0 24.1373427585527 45.74106874121108 24.1373427585527 5.013487579716781 0 1.2279659778248622 1.6989700043360187 0.3054621874040891 0.0 + + [HA]WDHAKSV;[HA]WDAHKSV;[HA]WDK[HA]SV;[HA]WSHA[VG]SV;[HA]WSAH[VG]SV;[HA]WDKS[HA]V;[HA]WKD[HA]SV;[HA]WS[VG][HA]SV;[HA]WKDS[HA]V;V[EP]SKD[YN]V 7.0877;6.61;4.8351;4.7118;4.0458;3.9863;3.9704;3.212;3.1216;2.5776 +;-;-;-;-;-;-;-;-;- + 706 1 2.101 83199.7 1.0 1543 5007 6544 HBL1_DMSO_200M_050219_1,6552 HBL1_DMSO_200M_050219_1,6552,HAWDHAKSV True True HAWDHAKSV 34.057751 350.841784656048 12298133.9375 6544.0 ENST00000510608.1_1_5:175813700-175815552:-|nuORF;;ENSG00000048162|ENST00000614830|NOP16;;nc|ENSG00000048162|Q9Y3C1-2|NOP16;;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;;nc|ENSG00000048162|Q9Y3C1-3|NOP16 8.53169027964274 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6553 34.062 225.0 393830.0 25 0 42494.0 + 36616 TAPTASKI 8 93 394.7291647343256 787.4437765354511 2 394.7292053103447 MULTI CID FTMS 0 0 0 6544 314712.5 0.5530110404523721 -2 0.1153182983398437 9 Unmodified _TAPTASKI_ ENSG00000140750|ENST00000289968|ARHGAP17;ENST00000570320.5_1_16:24931453-24947070:-|nuORF;ENST00000575283.5_1_16:24931453-24951019:-|nuORF;nc|ENSG00000140750|Q68EM7-2|ARHGAP17;nc|ENSG00000140750|Q68EM7-3|ARHGAP17;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;nc|ENSG00000140750|Q68EM7-6|ARHGAP17;nc|ENSG00000140750|Q68EM7-7|ARHGAP17 41.8396318013385 0.2035142800366642 3 [TA]PTASK{I|L} 8 0 + 55.346 0.0 0.0 7.0286 7.0286 95.032 0.0 0.0 0.0 40.96339572875836 10.979269022250122 10.979269022250122 50.54117073417203 0 0.75 2.0 0.3054621874040891 0.0 + + [TA]PTASK{I|L};[HK][RP]P[PG];[KS]A{[QN]|[E{I|L}]|[KN]}Q{I|L} 7.0286;0.6102;0.37838 +;-;- + 180 + 1 2.101 72257.2 1.0 1544 5007 6544 HBL1_DMSO_200M_050219_1,6553 HBL1_DMSO_200M_050219_1,6553,TAPTASKI False True TAPTASKI 34.061982 394.729205310345 2486809.0 6544.0 nc|ENSG00000140750|Q68EM7-2|ARHGAP17;;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;;nc|ENSG00000140750|Q68EM7-3|ARHGAP17;;ENSG00000140750|ENST00000289968|ARHGAP17;;ENST00000575283.5_1_16:24931453-24951019:-|nuORF;;nc|ENSG00000140750|Q68EM7-7|ARHGAP17;;ENST00000570320.5_1_16:24931453-24947070:-|nuORF;;nc|ENSG00000140750|Q68EM7-6|ARHGAP17 4.054453611373901 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6554 34.065 178.0 426100.0 25 0 21215.0 + 12005 GPPASLRDR 9 130 323.5137587468537 967.519446840761 3 323.5139343142509 MULTI CID FTMS 0 0 0 6544 229014.125 0.8271188873950702 -1 0.0606498718261718 10 Unmodified _GPPASLRDR_ REV__ENST00000394790.2_1_10:75532144-75533060:+|nuORF;REV__ENST00000465695.1_1_10:75532330-75533574:+|nuORF 5.296884461304476 0.7297726132274777 3 {I|L} 1 -1 10.278 0.0 0.0 1.0623 0.0 0.0 836.4244589030643 0.0 836.4244589030643 0.0 -5.920300943634782 -5.920300943634782 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0623 + + 159 + 1 2.101 61104.6 1.0 1545 5007 6544 HBL1_DMSO_200M_050219_1,6554 HBL1_DMSO_200M_050219_1,6554,GPPASLRDR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6555 34.07 220.0 344070.0 25 0 56741.0 + 28234 PQQPAAYAL 9 100 479.7515596158651 957.4885662985304 2 479.7518798708916 MULTI CID FTMS 0 0 0 6544 188470.875 0.2553508114780314 -3 0.1798286437988281 11 Unmodified _PQQPAAYAL_ ENSG00000157303|ENST00000375472|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;nc|ENSG00000157303|Q96L08-3|SUSD3 34.10243960390752 0.1078313939113124 3 PQD 3 7 55.688 0.0 0.0 5.816 0.0 0.0 0.0 614.3273141413399 614.3273141413399 23.23174228012605 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.3252574989159953 PQD 5.816 - 79 + 1 2.101 63014.4 1.0 1546 5007 6544 HBL1_DMSO_200M_050219_1,6555 HBL1_DMSO_200M_050219_1,6555,PQQPAAYAL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6556 34.083 800.0 88287.0 25 0 13445.0 -1 ECRVRFLSFL 10 87 663.8551029745461 1325.695653015892 2 663.8536254763603 MULTI CID FTMS 0 0 0 6544 111363.1796875 1.0 0 0.0 12 Carbamidomethyl (C) _EC(Carbamidomethyl (C))RVRFLSFL_ ENSG00000166313|ENST00000609360|APBB1;ENST00000526240.5_1_11:6416766-6417497:-|nuORF;nc|ENSG00000166313|O00213-2|APBB1;nc|ENSG00000166313|O00213-3|APBB1;nc|ENSG00000166313|O00213-4|APBB1;nc|ENSG00000166313|O00213-5|APBB1;nc|ENSG00000166313|O00213-6|APBB1 2.9952420565917617 0.7127817445270067 3 {I|L}TAD 4 -1 18.047 0.0 0.0 1.3614 0.0 0.0 62.04521758980543 860.4657076471311 922.5109252369366 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}TAD 1.3614 - 90 + 1 2.101 53870.9 0.6100000143051147 1547 5007 6544 HBL1_DMSO_200M_050219_1,6556 HBL1_DMSO_200M_050219_1,6556,ECRVRFLSFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6558 34.088 14.0 3450100.0 25 0 482890.0 + 17663 KPTGARPSAL 10 63 499.2931404244984 996.5717279157968 2 499.2931091189384 MULTI CID FTMS 0 0 0 6557 4330057.0 0.0191023238284244 16 -0.3851356506347656 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 18.373094154950223 0.5392593366289069 3 KPTQR 5 6 46.682 0.0 0.0 4.6843 0.0 0.0 0.0 383.1942232721313 383.1942232721313 41.197887582883936 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTQR 4.6843 - 42 + 1 2.098 43822.7 1.0 1548 5008 6557 HBL1_DMSO_200M_050219_1,6558 HBL1_DMSO_200M_050219_1,6558,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6559 34.089 20.0 1563600.0 25 0 275730.0 + 45353 YSQNQQSY 8 52 509.21725046095816 1016.4199479887164 2 509.2173339724541 MULTI CID FTMS 0 0 0 6557 2805375.75 0.6476403078892109 1 -0.0464553833007812 2 Unmodified _YSQNQQSY_ ENSG00000270647|ENST00000605844|TAF15;nc|ENSG00000270647|Q92804-2|TAF15 25.399314129420983 0.5099049743284904 3 [AG]SYNQQSY 9 3 [AG]SYNQQ + + 20.261 26.922 3.5976 1.9934 1.9934 48.832 0.0 0.0 0.0 0.0 -10.798210369235054 -10.798210369235054 0.0 0 0.0 0.0 0.3807196863200844 0.0 [AG]SYNQQSY 1.9934 - 275 + 1 2.098 31075.3 1.0 1549 5008 6557 HBL1_DMSO_200M_050219_1,6559 HBL1_DMSO_200M_050219_1,6559,YSQNQQSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6560 34.09 37.0 1362600.0 25 0 188830.0 + 37850 TLVANPNRL 9 71 333.1980440440732 996.5723027324194 3 333.1976196169853 MULTI CID FTMS 0 0 0 6557 1437942.75 0.0184373154271749 15 -0.3373336791992187 3 Unmodified _TLVANPNRL_ REV__ENSG00000145703|ENST00000274364|IQGAP2 10.823927491677226 0.5436922275383211 3 KPT 3 -1 20.445 0.0 0.0 2.0516 0.0 0.0 159.08920843227264 508.26300989322505 667.3522183254977 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 KPT 2.0516 - 33 + 1 2.098 46073.0 1.0 1550 5008 6557 HBL1_DMSO_200M_050219_1,6560 HBL1_DMSO_200M_050219_1,6560,TLVANPNRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6561 34.092 104.0 648550.0 25 0 68076.0 40163 VGPAVPGP 8 103 347.20021006850345 692.3858672038069 2 347.2000915408134 MULTI CID FTMS 0 0 0 6557 493469.625 0.9818209559926008 -1 0.0469779968261718 4 Unmodified _VGPAVPGP_ ENST00000472001.1_1_1:179052075-179052156:+|nuORF 2.889219685676258 0.8067950007271085 3 QAY 3 7 29.274 0.0 0.0 4.2281 0.0 0.0 312.2163258283219 0.0 312.2163258283219 0.0 19.44156304512834 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.8807196863200843 QAY 4.2281 - 76 1 2.098 59103.1 1.0 1551 5008 6557 HBL1_DMSO_200M_050219_1,6561 HBL1_DMSO_200M_050219_1,6561,VGPAVPGP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6562 34.1 406.0 232970.0 25 0 15530.0 + 5752 DPPASASQV 9 133 436.21117132598727 0 436.2113830447197 PEAK CID FTMS 0 0 0 6557 220486.171875 0.9106150612219244 5 -0.1648521423339843 5 Unmodified _DPPASASQV_ ENSG00000130816|ENST00000359526|DNMT1 64.23631603340823 0.0129441640563295 3 SADPAD 6 8 22.95 0.0 0.0 2.6367 0.0 0.0 245.1347927478745 66.03571497134999 311.17050771922453 0.0 0.0 0.0 0.0 0 0.2059771852360797 0.0 1.309894379144197 0.0 SADPAD 2.6367 - 131 + 1 2.098 78167.7 1.0 1552 5008 6557 HBL1_DMSO_200M_050219_1,6562 HBL1_DMSO_200M_050219_1,6562,DPPASASQV True True DPPASASQV 34.099641 436.21138304472 7080704.5 6557.0 ENSG00000130816|ENST00000359526|DNMT1 7.404522895812988 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6563 34.107 438.0 166700.0 25 0 17104.0 -1 VYVCVCVLS 9 107 549.7690474564511 1097.523541979702 2 549.7696411013603 MULTI CID FTMS 0 0 0 6557 156049.1875 0.2071549818219893 -6 0.26568603515625 6 2 Carbamidomethyl (C) _VYVC(Carbamidomethyl (C))VC(Carbamidomethyl (C))VLS_ ENST00000409535.6_1_3:51699723-51699894:+|nuORF 13.50788311687929 0.4710407108020397 3 [YV]V 3 -1 17.932 0.0 0.0 1.6338 0.0 0.0 0.0 733.3007691127676 733.3007691127676 7.335892975411177 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [YV]V 1.6338 + + 303 1 2.098 60374.5 1.0 1553 5008 6557 HBL1_DMSO_200M_050219_1,6563 HBL1_DMSO_200M_050219_1,6563,VYVCVCVLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6564 34.116 483.0 264330.0 25 0 24627.0 -1 IMIMKNFTSV 10 145 400.5439740858795 1198.6100928578385 3 400.5430786013603 MULTI CID FTMS 0 0 0 6557 153759.546875 0.5313642004367067 -3 0.1622962951660156 7 Oxidation (M) _IM(Oxidation (M))IMKNFTSV_ ENSG00000135048|ENST00000377044|CEMIP2;nc|ENSG00000135048|Q9UHN6-2|CEMIP2 26.020703789607367 0.3840598856887971 3 {I|L}PYNNKQHSV 10 -1 + 93.656 0.0 0.0 7.8137 7.8137 92.15 0.0 0.0 0.0 63.35064312620632 28.59575616836501 28.59575616836501 9.164539485499247 0 0.25 0.8538719643217619 2.0981362441963327 0.7302046884880937 {I|L}PYNNKQHSV;{I|L}PYNGGKQHSV;{I|L}PYGGNKQHSV;{I|L}PYNNK[AG]HSV;{I|L}PYGGGGKQHSV;{I|L}PYNGGK[AG]HSV;{I|L}PYGGNK[AG]HSV;{I|L}YPNNKQHSV;{I|L}YPNGGKQHSV;{I|L}YPGGNKQHSV 7.8137;7.0491;7.0491;7.0491;6.2875;6.2875;6.2875;6.0728;5.3082;5.3082 -;-;-;-;-;-;-;-;-;- 3115 + 1 2.098 99497.1 1.0 1554 5008 6557 HBL1_DMSO_200M_050219_1,6564 HBL1_DMSO_200M_050219_1,6564,IMIMKNFTSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6565 34.13 800.0 162350.0 25 0 11965.0 + 13054 HAWDHAKSV 9 145 525.7599951467645 1049.5054373603289 2 525.7591430544853 MULTI CID FTMS 0 0 0 6557 130680.6875 0.9619180661632628 -3 0.1622962951660156 8 Unmodified _HAWDHAKSV_ ENSG00000048162|ENST00000614830|NOP16;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;ENST00000510608.1_1_5:175813700-175815552:-|nuORF;nc|ENSG00000048162|Q9Y3C1-2|NOP16;nc|ENSG00000048162|Q9Y3C1-3|NOP16 90.13494162714682 0.0149365284241176 3 [HA]WDHAKSV 9 0 + 96.523 0.0 0.0 9.197 9.197 95.428 0.0 0.0 0.0 20.113168458567685 76.25763708712725 20.113168458567685 9.559771852360797 0 2.118415180652539 1.6989700043360187 0.850576203518622 0.0 + + [HA]WDHAKSV;[HA]WDAHKSV;[HA]WDAKHSV;[HD]WAHAKSV;HAWDHAKSV;[HA]WDKAHSV;[HA]WDAKSHV;{[{M(Oxidation (M))|F}C]|[YS]}STAHAKSV;[HA]WDKASHV;[HA]WDKSAHV 9.197;8.2861;7.064;6.962;6.9146;6.8962;6.4442;6.3617;6.2764;6.1573 +;-;-;-;+;-;-;-;-;- + 2889 1 2.098 103048.6 0.7099999785423279 1555 5008 6557 HBL1_DMSO_200M_050219_1,6565 HBL1_DMSO_200M_050219_1,6565,HAWDHAKSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6567 34.142 595.0 343960.0 25 0 26859.0 + 4206 DAPKDYRQV 9 214 364.52117959176223 1090.5417093754868 3 364.5209838747978 MULTI CID FTMS 0 0 0 6566 205226.5 0.0095230708364659 27 -0.743408203125 1 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 41.8396318013385 0.0653578398400075 3 {[DA]|[EG]}PKDY[R{I|L}]N 9 2 + 56.063 0.0 0.0 5.1408 5.1408 85.704 0.0 0.0 0.0 25.49656957707405 0.1158105757506717 0.1158105757506717 9.72511395750412 0 0.4247425010840047 2.0 0.0 1.6549471895720984 {[DA]|[EG]}PKDY[R{I|L}]N;WPKDYKSAP;WPKDYK[PA]S;{[DA]|[EG]}PV[SG]Y[R{I|L}]N;{[DA]|[EG]}VP[SG]Y[R{I|L}]N;WPV[SG]YKSAP;WPV[SG]YK[PA]S;{[DA]|[EG]}PV[HQ][QP]{I|L}S;[VS]SKYDK[HQ];{[DA]|[EG]}PV[HQ][QP]TV 5.1408;4.2491;4.1811;3.1934;2.9295;2.3017;2.2337;2.143;2.1308;2.1211 -;-;-;-;-;-;-;-;-;- 899 + 1 2.098 169265.5 1.0 1556 5009 6566 HBL1_DMSO_200M_050219_1,6567 HBL1_DMSO_200M_050219_1,6567,DAPKDYRQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6568 34.156 800.0 191290.0 25 0 25751.0 + 19208 LEGEESRMSGE 11 115 612.264301396037 1222.514049858874 2 612.2645141482353 MULTI CID FTMS 0 0 0 6566 178155.84375 0.5812461288827784 -1 0.0464553833007812 2 Unmodified _LEGEESRMSGE_ CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__Q7Z794;ENSG00000167768|ENST00000252244|KRT1;ENSG00000189182|ENST00000341809|KRT77 109.14607045052348 0.0121311205031201 3 {I|L}EGEESRMSGE 11 0 + 124.51 0.0 0.0 10.185 10.185 93.946 0.0 0.0 0.0 73.89436723352722 22.20530312426243 22.20530312426243 8.762874945799766 0 2.3737125054200234 2.0 2.7368303613050777 0.0 + + {I|L}EGEESRMSGE;{I|L}EEGESRMSGE;{I|L}EGE{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S][VP]GE;{I|L}EG{M(Oxidation (M))|F}S{[C(Carbamidomethyl (C))E]|[WC]}[VP]GE;{I|L}EEG{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S][VP]GE;{I|L}EG{M(Oxidation (M))|F}E[C(Carbamidomethyl (C))S][VP]GE;{I|L}EG{M(Oxidation (M))|F}SN{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))H];{I|L}EEG{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S]T[PS]P;{[QN]|[E{I|L}]|[KN]}GT[C(Carbamidomethyl (C))S]{M(Oxidation (M))|F}HSW;{[QN]|[E{I|L}]|[KN]}GE{M(Oxidation (M))|F}NSE{I|L}W 10.185;9.4683;8.171;7.4761;7.4542;7.2299;6.4148;6.1533;6.1152;6.0631 +;-;-;-;-;-;-;-;-;- + 2598 + 1 2.098 113942.6 0.75 1557 5009 6566 HBL1_DMSO_200M_050219_1,6568 HBL1_DMSO_200M_050219_1,6568,LEGEESRMSGE True True LEGEESRMSGE 34.156247 612.264514148235 1526375.375 6566.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253 9.520097732543944 2.0 True 11.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 6569 34.162 328.0 266320.0 25 0 18237.0 + -1 MAPPPPRSV 9 111 484.2552669328838 966.4959809325676 2 484.2553283572197 MULTI CID FTMS 0 0 0 6566 172010.828125 0.2107566622136403 11 -0.2306442260742187 3 Oxidation (M) _M(Oxidation (M))APPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 3 {[MS]|[{M(Oxidation (M))|F}A]}PPP 5 -1 44.754 0.0 0.0 4.6305 0.0 0.0 0.0 454.2420443170532 454.2420443170532 27.3187864658084 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}PPP 4.6305 + + 169 + 1 2.098 74480.3 1.0 1558 5009 6566 HBL1_DMSO_200M_050219_1,6569 HBL1_DMSO_200M_050219_1,6569,MAPPPPRSV False False MAPPPPRSV 34.162186 484.25532835722 9058244.0 6566.0 ENSG00000105879|ENST00000440859|CBLL1;;nc|ENSG00000105879|Q75N03-2|CBLL1 5.75984255472819 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6570 34.168 306.0 300900.0 25 0 38283.0 31394 RPCCRYGV 8 117 477.2258131266465 952.4370733200932 2 477.2244750857353 MULTI CID FTMS 0 0 0 6566 155905.171875 0.5458083999060446 -6 0.2904891967773437 4 Unmodified _RPCCRYGV_ ENST00000600689.1_1_19:18974163-18976510:+|nuORF 5.760428011301431 0.7893668129297577 3 GSV[KS]SGV 8 6 51.424 0.0 0.0 5.3992 0.0 0.0 233.06506179746765 0.0 233.06506179746765 0.0 42.27564199630712 0.0 0.0 0 0.805462187404089 0.0 0.5356668758921829 0.2887254899964357 GSV[KS]SGV 5.3992 - 230 + 1 2.098 76537.9 1.0 1559 5009 6566 HBL1_DMSO_200M_050219_1,6570 HBL1_DMSO_200M_050219_1,6570,RPCCRYGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6571 34.182 800.0 175060.0 25 0 12053.0 + 35913 SVNWNWGQDP 10 139 601.7628794182837 1201.5112059033672 2 601.7627441287041 MULTI CID FTMS 0 0 0 6566 137090.0 0.519977052584666 -6 0.2904891967773437 5 Unmodified _SVNWNWGQDP_ REV__nc|ENSG00000146839|Q9Y493-2|ZAN 26.268140514670165 0.3785003716575977 3 [AG]NA{[DS]|[MA]|[CV]|TT}EAQQDP 12 -1 + 82.85 0.0 0.0 6.8955 6.8955 82.537 0.0 0.0 0.0 9.542425094393252 16.611814434466197 9.542425094393252 2.460762528683702 0 0.0 2.0 0.3494850021680094 2.030369551124698 [AG]NA{[DS]|[MA]|[CV]|TT}EAQQDP;[AG]GQ{[DS]|[MA]|[CV]|TT}EAQQDP;[AG]QG{[DS]|[MA]|[CV]|TT}EAQQDP;[AG]AN{[DS]|[MA]|[CV]|TT}EAQQDP;[AG]DAQ{[DS]|[MA]|[CV]|TT}AQQDP;[AG]NAE{[DS]|[MA]|[CV]|TT}AQQDP;[AG]NA{[DS]|[MA]|[CV]|TT}EA[AG]QDP;[AG]NA{[DS]|[MA]|[CV]|TT}EAQ[AG]DP;[AG]GGA{[DS]|[MA]|[CV]|TT}EAQQDP;[AG]N{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQDP 6.8955;6.6907;6.6339;6.3453;6.2053;6.2053;6.1382;6.1382;6.1379;6.1276 -;-;-;-;-;-;-;-;-;- 8888 1 2.098 101690.8 0.6800000071525574 1560 5009 6566 HBL1_DMSO_200M_050219_1,6571 HBL1_DMSO_200M_050219_1,6571,SVNWNWGQDP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6573 34.186 118.0 365200.0 25 0 27157.0 + 23220 LSSSKSTTVP 10 71 503.7748672661611 1005.5351815991222 2 503.7744933962822 MULTI CID FTMS 0 0 0 6572 271360.71875 0.240374919349472 2 -0.0460205078125 1 Unmodified _LSSSKSTTVP_ REV__ENSG00000197386|ENST00000355072|HTT;REV__ENST00000510626.5_1_4:3131970-3189635:+|nuORF 22.736283301280096 0.4578556481593033 3 VT{I|L}DTTQTK 9 -1 + 76.297 0.0 0.0 7.5877 7.5877 92.348 0.0 0.0 0.0 65.81215024481537 7.492049162231567 7.492049162231567 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.4247425010840047 VT{I|L}DTTQTK;VT{I|L}DTT[AG]TK;VT{I|L}[WM]QTK;VT{I|L}[WM][AG]TK;VT{I|L}DT[YV][VP];VT[HK]YY[VP] 7.5877;6.6719;6.1519;5.2308;5.2042;2.8703 -;-;-;-;-;- 139 + 1 2.098 39658.1 1.0 1561 5010 6572 HBL1_DMSO_200M_050219_1,6573 HBL1_DMSO_200M_050219_1,6573,LSSSKSTTVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6574 34.2 800.0 61410.0 25 0 8097.9 + -1 FWYNCWCYLPN 11 75 811.8321116160577 1621.6496702989152 2 811.8326293826103 MULTI CID FTMS 0 0 0 6572 116570.2734375 0.1530579241707234 3 -0.0665397644042968 2 2 Carbamidomethyl (C) _FWYNC(Carbamidomethyl (C))WC(Carbamidomethyl (C))YLPN_ REV__ENST00000272542.7_1_2:113404910-113405027:+|nuORF 0.3070304955306653 0.8736993455979228 3 {[YD]|[{M(Oxidation (M))|F}M]}GSYS 6 -1 42.101 0.0 0.0 2.5962 0.0 0.0 0.0 946.3879875198714 946.3879875198714 2.05136871872881 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.9247425010840048 0.0 {[YD]|[{M(Oxidation (M))|F}M]}GSYS 2.5962 - 402 1 2.098 38517.1 0.8199999928474426 1562 5010 6572 HBL1_DMSO_200M_050219_1,6574 HBL1_DMSO_200M_050219_1,6574,FWYNCWCYLPN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6576 34.206 190.0 368970.0 25 0 38805.0 + 7361 DAAPGPEKV 9 105 442.2297179231514 882.4448829131029 2 442.2295104861259 MULTI CID FTMS 0 0 0 6575 295432.34375 0.624188718770542 4 -0.0647811889648437 1 Unmodified _EGAPSPVVGA_ ENSG00000101544|ENST00000262198|ADNP2 18.1463463914782 0.5430639438673815 3 {[DA]|[EG]}A 3 7 30.942 0.0 0.0 3.5064 0.0 0.0 0.0 622.3207123410904 622.3207123410904 17.397868585481078 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}A 3.5064 + + 112 1 2.098 58702.0 1.0 1563 5011 6575 HBL1_DMSO_200M_050219_1,6576 HBL1_DMSO_200M_050219_1,6576,EGAPSPVVGA False False DAAPGPEKV 34.206102 442.229510486126 2620519.25 6575.0 ENSG00000101544|ENST00000262198|ADNP2 4.235885381698608 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6577 34.22 800.0 124350.0 25 0 10430.0 45379 YSYYCDQN 8 129 528.1910034116496 1054.3674538900991 2 528.1906616091728 MULTI CID FTMS 0 0 0 6575 71094.484375 0.2034822292084229 5 -0.0980720520019531 2 Unmodified _YSYYCDQN_ ENSG00000134365|ENST00000608469|CFHR4;ENSG00000134365|ENST00000608469|CFHR4;nc|ENSG00000134365|Q92496-2|CFHR4;nc|ENSG00000134365|Q92496-2|CFHR4;nc|ENSG00000134365|Q92496-3|CFHR4 7.910154910731844 0.7763180056447161 3 YS[YN]N 5 4 38.06 0.0 0.0 3.6097 0.0 0.0 0.0 410.1049898736938 410.1049898736938 28.144873016619574 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.4247425010840047 YS[YN]N 3.6097 - 85 + 1 2.098 81084.0 0.6700000166893005 1564 5011 6575 HBL1_DMSO_200M_050219_1,6577 HBL1_DMSO_200M_050219_1,6577,YSYYCDQN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6578 34.228 429.0 176250.0 25 0 19288.0 + 4211 DAPKDYRQV 9 86 546.2774609261191 1090.5403689190382 2 546.2764770388603 MULTI CID FTMS 0 0 0 6575 161436.515625 0.0115104313128848 28 -0.8242683410644531 3 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 15.248480904072842 0.4239247793462406 3 DAPKD 5 4 56.37 0.0 0.0 5.169 0.0 0.0 0.0 561.2786073773998 561.2786073773998 43.895840698003 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + DAPKD 5.169 + + 113 + 1 2.098 62200.7 1.0 1565 5011 6575 HBL1_DMSO_200M_050219_1,6578 HBL1_DMSO_200M_050219_1,6578,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6580 34.243 688.0 153900.0 25 0 8322.0 + 4359 DATNGPKTI 9 147 458.7405612014856 0 458.7410156130791 PEAK CID FTMS 0 0 0 6579 87928.296875 0.477169404134663 5 -0.0892257690429687 1 Unmodified _DATNGPKTI_ ENSG00000010539|ENST00000414144|ZNF200;nc|ENSG00000010539|P98182-2|ZNF200;nc|ENSG00000010539|P98182-3|ZNF200 15.248480904072842 0.2520662914010398 3 G 1 8 4.6041 0.0 0.0 0.50292 0.0 0.0 787.371276356293 68.05130182437733 855.4225781806704 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 0.50292 + + 24 + 1 2.098 83741.1 1.0 1566 5012 6579 HBL1_DMSO_200M_050219_1,6580 HBL1_DMSO_200M_050219_1,6580,DATNGPKTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6581 34.245 87.0 938800.0 25 0 126120.0 + 628 AELDIPLS 8 97 429.2329715144051 0 429.2329284548759 PEAK CID FTMS 0 0 0 6579 404681.625 0.5052222795726109 19 -0.4867591857910156 2 Unmodified _AELDIPLS_ REV__ENSG00000160062|ENST00000373510|ZBTB8A 9.347437153973935 0.5488964601725408 3 W 1 -1 0.71334 0.0 0.0 0.08329 0.0 0.0 428.2541682711946 239.0925692193969 667.3467374905915 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.08329 - 1 + 1 2.098 67021.2 1.0 1567 5012 6579 HBL1_DMSO_200M_050219_1,6581 HBL1_DMSO_200M_050219_1,6581,AELDIPLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6582 34.248 180.0 539300.0 25 0 36983.0 + 30898 RIQSKLYRA 9 109 378.8964051159615 1133.6673859480843 3 378.8960143923759 MULTI CID FTMS 0 0 0 6579 371026.25 0.6542139705796459 -6 0.2519607543945312 3 Unmodified _RIQSKLYRA_ ENSG00000144028|ENST00000323853|SNRNP200;nc|ENSG00000144028|O75643-2|SNRNP200 51.487983226225225 0.0371074584807926 3 [R{I|L}]QSK{I|L} 6 3 56.903 0.0 0.0 5.0194 0.0 0.0 0.0 405.1904104072003 405.1904104072003 46.98798866358951 0.0 0.0 0.0 0 1.8494850021680087 1.0 0.3252574989159953 0.9291746928241126 + [R{I|L}]QSK{I|L} 5.0194 + + 185 1 2.098 83280.2 1.0 1568 5012 6579 HBL1_DMSO_200M_050219_1,6582 HBL1_DMSO_200M_050219_1,6582,RIQSKLYRA True True RIQSKLYRA 34.248088 378.896014392376 2713731.5 6579.0 nc|ENSG00000144028|O75643-2|SNRNP200;;ENSG00000144028|ENST00000323853|SNRNP200 4.515463193257649 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6584 34.253 143.0 441620.0 25 0 51111.0 + -1 KPCLLLDPL 9 64 534.811839223524 1067.609125513848 2 534.8117553591728 MULTI CID FTMS 0 0 0 6583 418485.75 0.5252028700459058 6 -0.0989494323730468 1 Carbamidomethyl (C) _KPC(Carbamidomethyl (C))LLLDPL_ REV__ENST00000478182.5_1_3:119246651-119248702:-|nuORF 23.1484247019978 0.2366544122328345 3 KPT 3 -1 43.94 0.0 0.0 4.1158 0.0 0.0 0.0 738.3897710499325 738.3897710499325 17.909393809954892 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 KPT 4.1158 - 20 + 1 2.098 56063.3 1.0 1569 5013 6583 HBL1_DMSO_200M_050219_1,6584 HBL1_DMSO_200M_050219_1,6584,KPCLLLDPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6585 34.256 135.0 481050.0 25 0 60424.0 28078 PPHPPPPPP 9 78 466.7531945699682 931.4918362067364 2 466.7529479861259 MULTI CID FTMS 0 0 0 6583 283892.53125 0.5188338655373493 5 -0.0895614624023437 2 Unmodified _PPHPPPPPP_ ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000066855|ENST00000262146|MTFR1;ENSG00000163064|ENST00000295206|EN1;ENSG00000175879|ENST00000313173|HOXD8;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000066855|Q15390-2|MTFR1;nc|ENSG00000175879|P13378-2|HOXD8;REV__nc|ENSG00000182095|O15417-2|TNRC18 36.46614268402704 0.0948557732959553 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK] 8 3 + 34.896 0.0 0.0 3.7462 3.7462 68.843 0.0 0.0 0.0 0.2422750325201406 6.989700043360188 0.2422750325201406 0.2422750325201406 0 0.9247425010840048 0.0 0.3252574989159953 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK];{[HG]|PP}HPPP[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]P[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YK][YK];{[HG]|PP}H[YK][YK] 3.7462;3.7202;1.3423;0.91233;0.88632 -;-;-;-;- 68 1 2.098 54113.7 1.0 1570 5013 6583 HBL1_DMSO_200M_050219_1,6585 HBL1_DMSO_200M_050219_1,6585,PPHPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6587 34.262 168.0 388640.0 25 0 45690.0 + 41993 VQPEAQAKV 9 91 485.2723105747708 968.5300682163416 2 485.2731506228447 MULTI CID FTMS 0 0 0 6586 305537.96875 0.5046373277034588 -5 0.1263694763183593 1 Unmodified _VQPEAQAKV_ ENSG00000092010|ENST00000206451|PSME1;ENST00000559123.5_1_14:24605441-24606207:+|nuORF;ENST00000561059.5_1_14:24605441-24606295:+|nuORF;ENST00000561142.5_1_14:24605441-24607359:+|nuORF;nc|ENSG00000092010|Q06323-2|PSME1;nc|ENSG00000092010|Q06323-3|PSME1 22.736283301280096 0.2418982879461534 3 {[QV]|[N{I|L}]|[RA]|[KV]}PE 4 5 29.157 0.0 0.0 3.0104 0.0 0.0 0.0 512.2832735650999 512.2832735650999 -1.7778070526608047 0.0 -1.7778070526608047 0.0 0 0.5 1.3979400086720375 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}PE 3.0104 + + 343 + 1 2.098 54072.5 1.0 1571 5014 6586 HBL1_DMSO_200M_050219_1,6587 HBL1_DMSO_200M_050219_1,6587,VQPEAQAKV False True VQPEAQAKV 34.261671 485.273150622845 3023210.75 6586.0 ENST00000561142.5_1_14:24605441-24607359:+|nuORF;;ENST00000561059.5_1_14:24605441-24606295:+|nuORF;;nc|ENSG00000092010|Q06323-3|PSME1;;ENSG00000092010|ENST00000206451|PSME1;;ENST00000559123.5_1_14:24605441-24606207:+|nuORF;;nc|ENSG00000092010|Q06323-2|PSME1 4.91177495320638 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6588 34.265 166.0 366400.0 25 0 80927.0 + 45565 YVDPSNPNA 9 83 488.72215860158775 975.4297642699756 2 488.7218810915947 MULTI CID FTMS 0 0 0 6586 199708.3125 0.8132540745636818 -1 0.0079727172851562 2 Unmodified _YVDPSNPNA_ ENSG00000181555|ENST00000409792|SETD2 20.453626601364224 0.2830276176381075 3 [YV]D 3 6 24.437 0.0 0.0 2.5053 0.0 0.0 0.0 595.2478849577286 595.2478849577286 7.411356165197844 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [YV]D 2.5053 + + 69 1 2.098 53977.8 1.0 1572 5014 6586 HBL1_DMSO_200M_050219_1,6588 HBL1_DMSO_200M_050219_1,6588,YVDPSNPNA False True YVDPSNPNA 34.264921 488.721881091595 1323179.125 6586.0 ENSG00000181555|ENST00000409792|SETD2 6.0271077156066895 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6590 34.281 800.0 194910.0 25 0 16276.0 + 35919 SVPDTVHHV 9 137 495.7538602150016 989.4931674968032 2 495.7537414431572 MULTI CID FTMS 0 0 0 6589 81713.0234375 0.0167833867743548 -11 0.408477783203125 1 Unmodified _SVPDTVHHV_ ENSG00000079785|ENST00000233084|DDX1;ENST00000459706.1_1_2:15757448-15761320:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 44.40701690623563 0.0526327925666318 3 [VS]PDTVHVH 9 2 + 63.337 0.0 0.0 6.4009 6.4009 79.571 0.0 0.0 0.0 27.147642715192504 1.5261016320615894 1.5261016320615894 1.5261016320615894 0 0.4247425010840047 2.0 0.805462187404089 0.0 [VS]PDTVHVH;[VS]PDTVHHV;[VS]PEHHVSV;[DP]TVHHVSV;[PS]EVHHVSV;[VS]{[ET]|[MV]}[YR]VH;[VS]{[ET]|[MV]}[YR]HV;[VS][{I|L}T]HD[YR];[VS]PTHHVDV;[VS]PQG[PS][YR] 6.4009;6.2467;4.1905;3.7302;3.1599;3.0927;2.9385;2.3817;2.2526;2.0856 -;+;-;-;-;-;-;-;-;- + 788 + 1 2.098 120305.2 0.5299999713897705 1573 5015 6589 HBL1_DMSO_200M_050219_1,6590 HBL1_DMSO_200M_050219_1,6590,SVPDTVHHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6591 34.284 171.0 511560.0 25 0 38914.0 + 24772 MPHPATGKTV 10 118 346.8514241171479 1037.5324429516436 3 346.8514587283134 MULTI CID FTMS 0 0 0 6589 227289.109375 0.170348679252 -15 0.5078544616699219 2 Unmodified _MPHPATGKTV_ ENSG00000070814|ENST00000643257|TCOF1;ENST00000515035.5_1_5:149748314-149754605:+|nuORF;nc|ENSG00000070814|Q13428-2|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;nc|ENSG00000070814|Q13428-5|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428|TCOF1 12.872603262515298 0.6315522313594999 3 {NN|[MP]|[D{I|L}]|[EV]}HP[KT]QTV 9 3 + 30.292 0.0 0.0 2.9196 2.9196 73.217 0.0 0.0 0.0 15.687427624442364 7.061289414256592 7.061289414256592 3.979400086720375 0 0.25 0.6777807052660807 0.5941876774005248 0.0 {NN|[MP]|[D{I|L}]|[EV]}HP[KT]QTV;{NN|[MP]|[D{I|L}]|[EV]}HP[QT]KTV;{NN|[MP]|[D{I|L}]|[EV]}HPA{[SA]|[TG]}KTV;{NN|[MP]|[D{I|L}]|[EV]}HP[KT][AG]TV;{NN|[MP]|[D{I|L}]|[EV]}HP[KT]K{[CP]|[EA]} 2.9196;2.536;2.4919;2.0321;1.7431 -;-;+;-;- + 150 + 1 2.098 73515.1 1.0 1574 5015 6589 HBL1_DMSO_200M_050219_1,6591 HBL1_DMSO_200M_050219_1,6591,MPHPATGKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6592 34.298 800.0 103500.0 25 0 10516.0 + 1352 AKVEEEPSEP 10 111 557.7648964577072 1113.5152399822143 2 557.7642089724541 MULTI CID FTMS 0 0 0 6589 96130.0859375 0.8488314250238462 10 -0.2073402404785156 3 Unmodified _AKVEEEPSEP_ REV__ENSG00000058673|ENST00000367210|ZC3H11A;REV__ENSG00000215817|ENST00000651890|ZC3H11B;REV__nc|ENSG00000214558|P0DQW0|ZC3H11C 9.38312468134398 0.6832340498775793 3 T{M(Oxidation (M))|F}K 3 -1 16.132 0.0 0.0 1.4487 0.0 0.0 719.3263189390487 0.0 719.3263189390487 0.0 0.5584810522916754 0.0 0.0 0 0.0 0.0 0.0 0.1861818737241735 T{M(Oxidation (M))|F}K 1.4487 - 125 + 1 2.098 67260.6 0.5400000214576721 1575 5015 6589 HBL1_DMSO_200M_050219_1,6592 HBL1_DMSO_200M_050219_1,6592,AKVEEEPSEP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6594 34.303 33.0 1315500.0 25 0 165160.0 + 34785 SQDPGTHVV 9 63 470.23010219428033 938.4456514553608 2 470.2296325564384 MULTI CID FTMS 0 0 0 6593 1139833.125 0.0432194795279165 9 -0.1740493774414062 1 Unmodified _SQDPGTHVV_ ENSG00000130935|ENST00000253247|NOL11 25.399314129420983 0.2080152500878129 3 {[QS]|[NT]}D 3 6 30.845 0.0 0.0 3.2868 0.0 0.0 0.0 605.3065883052232 605.3065883052232 20.007374369102287 0.0 0.0 0.0 0 1.0 0.0 0.2887254899964357 0.75 + {[QS]|[NT]}D 3.2868 + + 31 1 2.098 40248.7 1.0 1576 5016 6593 HBL1_DMSO_200M_050219_1,6594 HBL1_DMSO_200M_050219_1,6594,SQDPGTHVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6595 34.305 92.0 751260.0 25 0 71805.0 + 3233 AWSKMYSY 8 97 518.2343292478929 1034.4541055625857 2 518.2325927615166 MULTI CID FTMS 0 0 0 6593 274004.5625 0.1348009480678155 7 -0.1223716735839843 2 Unmodified _AWSKMYSY_ REV__ENSG00000152939|ENST00000325631|MARVELD2;REV__nc|ENSG00000152939|Q8N4S9-2|MARVELD2;REV__nc|ENSG00000152939|Q8N4S9-3|MARVELD2 16.942295170755138 0.6606234159769251 3 [KT]{[DA]|[EG]}TSYSY 9 -1 + 16.837 0.0 0.0 1.6276 1.6276 78.676 0.0 0.0 0.0 0.5057560012586073 2.8572092496254022 0.5057560012586073 11.397065965837 0 0.5172203223519531 0.0 0.75 0.2614393726401688 [KT]{[DA]|[EG]}TSYSY;[KT]{[DA]|[EG]}T[HM][MT] 1.6276;0.52584 -;- 121 1 2.098 55715.2 1.0 1577 5016 6593 HBL1_DMSO_200M_050219_1,6595 HBL1_DMSO_200M_050219_1,6595,AWSKMYSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6596 34.311 349.0 293420.0 25 0 19906.0 + 21182 LPDATSSHRTV 11 125 395.2070921144592 1182.5994469435775 3 395.2062255740166 MULTI CID FTMS 0 0 0 6593 144342.59375 0.0183061757185003 -21 0.7223396301269531 3 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 30.41366949970193 0.3780803821168328 3 {I|L}PDATSSHRS{I|L} 11 2 + 78.5 0.0 0.0 6.6379 6.6379 80.063 0.0 0.0 0.0 28.12479279163537 1.3798422624808635 1.3798422624808635 1.3798422624808635 0 0.4247425010840047 1.154901959985743 1.1861818737241734 0.4247425010840047 {I|L}PDATSSHRS{I|L};{I|L}PDATSSHRVT;{I|L}PDAT[YK]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T;{I|L}PW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}HRS{I|L};{I|L}PW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}HRVT;{I|L}PW{[{M(Oxidation (M))|F}H]|[RQ]}QRS{I|L};{I|L}PW{[{M(Oxidation (M))|F}H]|[RQ]}QRVT;{I|L}PW{[{M(Oxidation (M))|F}H]|[RQ]}[AG]RS{I|L};{I|L}PW{[{M(Oxidation (M))|F}H]|[RQ]}[AG]RVT;[KQ]{NN|[MP]|[D{I|L}]|[EV]}NSTA{[HG]|PP}{I|L} 6.6379;6.5212;4.5658;4.1311;4.0145;3.9812;3.8645;3.2026;3.0859;2.7692 -;-;-;-;-;-;-;-;-;- 454 + 1 2.098 85508.6 1.0 1578 5016 6593 HBL1_DMSO_200M_050219_1,6596 HBL1_DMSO_200M_050219_1,6596,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6597 34.317 312.0 307230.0 25 0 24239.0 + 14685 IISSNKKIE 9 114 344.54154505266627 0 344.5409728884697 PEAK CID FTMS 0 0 0 6593 125057.140625 0.3676378220907619 22 -0.6695137023925781 4 Unmodified _IISSNKKIE_ REV__ENSG00000011454|ENST00000373647|RABGAP1 8.155526934196011 0.3334291183486324 3 M 1 -1 0.71334 0.0 0.0 0.10382 0.0 0.0 343.94287906842004 209.0570009820922 552.9998800505123 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.10382 - 1 + 1 2.098 82757.4 1.0 1579 5016 6593 HBL1_DMSO_200M_050219_1,6597 HBL1_DMSO_200M_050219_1,6597,IISSNKKIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6599 34.327 341.0 241810.0 25 0 28545.0 + 13053 HAWDHAKSV 9 119 350.84220301516103 1049.5047796456831 3 350.8417541384697 MULTI CID FTMS 0 0 0 6598 241842.671875 0.1981561106352566 8 -0.1554527282714843 1 Unmodified _HAWDHAKSV_ ENSG00000048162|ENST00000614830|NOP16;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;ENST00000510608.1_1_5:175813700-175815552:-|nuORF;nc|ENSG00000048162|Q9Y3C1-2|NOP16;nc|ENSG00000048162|Q9Y3C1-3|NOP16 36.12702656103203 0.0967173616627612 3 [HA][WD]HAK 7 2 39.569 0.0 0.0 3.7703 0.0 0.0 0.0 201.08943407006555 201.08943407006555 27.09523834026633 0.0 0.0 0.0 0 0.6109243748081782 1.6989700043360187 0.3494850021680094 0.0 + [HA][WD]HAK 3.7703 + + 83 1 2.108 75873.1 1.0 1580 5017 6598 HBL1_DMSO_200M_050219_1,6599 HBL1_DMSO_200M_050219_1,6599,HAWDHAKSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6600 34.328 46.0 1922700.0 25 0 334780.0 + 35921 SVPDTVHHV 9 91 330.83842919132684 989.4934581741804 3 330.8380309939384 MULTI CID FTMS 0 0 0 6598 1424045.125 0.1432609263175261 -8 0.187103271484375 2 Unmodified _SVPDTVHHV_ ENSG00000079785|ENST00000233084|DDX1;ENST00000459706.1_1_2:15757448-15761320:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 36.04419817259434 0.0971720506436186 3 [VS]PDTVHVH 9 2 + 69.364 0.0 0.0 7.01 7.01 86.482 0.0 0.0 0.0 27.147642715192504 4.929155219028942 4.929155219028942 4.929155219028942 0 0.3807196863200844 2.0 0.3494850021680094 0.0 [VS]PDTVHVH;[VS]PDTVHHV;[VS]PDTVVHH;[VS]PV{[ES]|[DT]|[{I|L}C]}HVH;[VS]VP{[ES]|[DT]|[{I|L}C]}HVH;[VS]PV{[ES]|[DT]|[{I|L}C]}HHV;[VS]VP{[ES]|[DT]|[{I|L}C]}HHV;[VS]PV{[ES]|[DT]|[{I|L}C]}VHH;[VS]VP{[ES]|[DT]|[{I|L}C]}VHH;[VS][{I|L}T]HD[YR] 7.01;6.5119;6.0456;5.6261;5.3534;5.1279;4.8553;4.6617;4.389;3.567 -;+;-;-;-;-;-;-;-;- + 319 + 1 2.108 75563.4 1.0 1581 5017 6598 HBL1_DMSO_200M_050219_1,6600 HBL1_DMSO_200M_050219_1,6600,SVPDTVHHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6601 34.338 558.0 176870.0 25 0 18878.0 + 13673 HPYYGKTGV 9 123 511.25850862571406 1020.502464318228 2 511.2580139040947 MULTI CID FTMS 0 0 0 6598 129657.875 0.755595438256707 -2 0.0518875122070312 3 Unmodified _HPYYGKTGV_ ENSG00000151233|ENST00000398675|GXYLT1;nc|ENSG00000151233|Q4G148-2|GXYLT1 19.361941925380144 0.3125782356748823 3 HPYYGKTGV 9 0 + 42.82 0.0 0.0 4.196 4.196 77.019 0.0 0.0 0.0 16.47817481888636 4.736607226101555 4.736607226101555 4.736607226101555 0 0.5968040358200661 0.0 0.0 0.0 + + HPYYGKTGV;HPYYGK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};HR{[ES]|[DT]|[{I|L}C]}VHTGV;HRK[YG]{[{M(Oxidation (M))|F}D]|MM}V;HP{I|L}{I|L}C(Carbamidomethyl (C))[EP]GV;HP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};HR{[ES]|[DT]|[{I|L}C]}VH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};HRK{[ES]|[DT]|[{I|L}C]}{[DS]|[MA]|[CV]|TT}Y;YY{[WS]|[C(Carbamidomethyl (C)){I|L}]}K{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};YYG{[ES]|[DT]|[{I|L}C]}K{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.196;3.7318;2.0234;1.8513;1.813;1.7542;1.5592;1.3269;1.3163;1.1819 +;-;-;-;-;-;-;-;-;- + 587 + 1 2.108 79371.9 1.0 1582 5017 6598 HBL1_DMSO_200M_050219_1,6601 HBL1_DMSO_200M_050219_1,6601,HPYYGKTGV False True HPYYGKTGV 34.337658 511.258013904095 1009675.9375 6598.0 nc|ENSG00000151233|Q4G148-2|GXYLT1;;ENSG00000151233|ENST00000398675|GXYLT1 5.404083410898845 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6603 34.342 42.0 1255500.0 25 0 208710.0 + 17606 KPTAAFHLL 9 57 499.2931404244984 996.5717279157968 2 499.2930786013603 MULTI CID FTMS 0 0 0 6602 1454353.75 0.0064159747304904 26 -1.1164474487304688 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 3 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3526247139288 667.3526247139288 28.58349385648225 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 30 + 1 2.108 47606.2 1.0 1583 5018 6602 HBL1_DMSO_200M_050219_1,6603 HBL1_DMSO_200M_050219_1,6603,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6604 34.347 261.0 201370.0 25 0 34102.0 28235 PQQPAAYAL 9 83 479.7515596158651 957.4885662985304 2 479.7513915896416 MULTI CID FTMS 0 0 0 6602 209689.6875 0.2840992374110844 8 -0.1528205871582031 2 Unmodified _PQQPAAYAL_ ENSG00000157303|ENST00000375472|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;nc|ENSG00000157303|Q96L08-3|SUSD3 23.1484247019978 0.2366544122328345 3 PQD{M(Oxidation (M))|F} 4 7 56.587 0.0 0.0 5.9099 0.0 0.0 0.0 467.24375330142817 467.24375330142817 41.9825221775622 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.4247425010840047 PQD{M(Oxidation (M))|F} 5.9099 - 64 + 1 2.108 45287.9 1.0 1584 5018 6602 HBL1_DMSO_200M_050219_1,6604 HBL1_DMSO_200M_050219_1,6604,PQQPAAYAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6606 34.352 27.0 2610900.0 25 0 163870.0 + 28921 QAPVAAHTV 9 102 447.2458022165966 892.4770514999932 2 447.2457763552666 MULTI CID FTMS 0 0 0 6605 2346498.75 1.0 0 0.0 1 Unmodified _QAPVAAHTV_ ENSG00000056097|ENST00000265069|ZFR;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 64.23631603340823 0.0237365939569086 3 [QA]PVAAH{[TV]|[{I|L}S]} 9 0 + 61.794 0.0 0.0 6.9238 6.9238 93.516 0.0 0.0 0.0 52.58532514725495 16.025684359364405 16.025684359364405 20.48963451112506 0 0.3054621874040891 2.0 1.4916440611282624 0.0 + + [QA]PVAAH{[TV]|[{I|L}S]};[QA]P[Q{I|L}]H{[TV]|[{I|L}S]};[QA]PV[WP]VP;[QA][{I|L}T]AA[YR];[QA][HK][DV]VP;[QA][{I|L}T][HQ]VP;[QA][{I|L}T]V[HQ]P;[VP][WP][VP][QA] 6.9238;4.628;3.724;3.4695;2.0497;2.0497;1.9097;0.20508 +;-;-;-;-;-;-;- + 290 + 1 2.108 61473.1 1.0 1585 5019 6605 HBL1_DMSO_200M_050219_1,6606 HBL1_DMSO_200M_050219_1,6606,QAPVAAHTV True True QAPVAAHTV 34.35161 447.2459 10791370.0 6605.0 ENSG00000056097|ENST00000265069|ZFR;;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 7.009874979654948 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6607 34.353 60.0 1093200.0 25 0 122440.0 + 32422 SAAPVPRPA 9 72 433.2480203876325 0 433.2480346560478 PEAK CID FTMS 0 0 0 6605 744076.875 0.6200382275738511 11 -0.3190536499023437 2 Unmodified _SAAPVPRPA_ REV__ENST00000374763.6_2_1:21923469-21929399:-|nuORF;REV__ENST00000542643.6_1_1:21923469-21929393:-|nuORF 19.256988751693697 0.2078072434435185 3 PP 2 -1 13.271 0.0 0.0 1.5352 0.0 0.0 229.1058796775416 438.2467953487521 667.3526750262937 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 PP 1.5352 - 37 + 1 2.108 56719.0 1.0 1586 5019 6605 HBL1_DMSO_200M_050219_1,6607 HBL1_DMSO_200M_050219_1,6607,SAAPVPRPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6608 34.355 95.0 647120.0 25 0 79713.0 + 27548 PKYIHNLL 8 81 333.1979866606353 996.572130582106 3 333.1974975466728 MULTI CID FTMS 0 0 0 6605 526418.6875 0.4189707982387774 -6 0.0989494323730468 3 Unmodified _PKYIHNLL_ ENSG00000126653|ENST00000247026|NSRP1 18.13498045792455 0.6430038125133779 3 TPR{I|L} 4 7 29.469 0.0 0.0 2.957 0.0 0.0 511.28672988105626 0.0 511.28672988105626 0.0 17.047509540478032 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 TPR{I|L} 2.957 - 138 1 2.108 55565.8 1.0 1587 5019 6605 HBL1_DMSO_200M_050219_1,6608 HBL1_DMSO_200M_050219_1,6608,PKYIHNLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6609 34.357 95.0 1159600.0 25 0 242610.0 28389 PSPGPGGHV 9 99 402.7033658060656 0 402.7033874392509 PEAK CID FTMS 0 0 0 6605 413421.15625 0.2697008017137585 -5 0.0909767150878906 4 Unmodified _PSPGPGGHV_ nc|ENSG00000181856|P14672-2|SLC2A4 21.74664581756881 0.185237546287679 3 HHVED 5 9 31.242 0.0 0.0 3.8888 0.0 0.0 117.07665065108172 66.03564630679921 183.1122969578809 0.0 0.0 0.0 0.0 0 1.4423877696554317 0.0 1.1368617341927687 0.0 HHVED 3.8888 - 388 + 1 2.108 92160.1 1.0 1588 5019 6605 HBL1_DMSO_200M_050219_1,6609 HBL1_DMSO_200M_050219_1,6609,PSPGPGGHV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6610 34.36 161.0 354530.0 25 0 32665.0 + 4305 DARKVEVLY 9 94 364.8731855559832 1091.5977272681496 3 364.8726379275322 MULTI CID FTMS 0 0 0 6605 177480.5625 0.6557604531062029 -2 0.030242919921875 5 Unmodified _DARKVEVLY_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 15.248480904072842 0.4239247793462406 3 PKD 3 -1 16.198 0.0 0.0 1.4839 0.0 0.0 187.1240111796696 561.2774693790589 748.4014805587285 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PKD 1.4839 - 119 + 1 2.108 54079.1 1.0 1589 5019 6605 HBL1_DMSO_200M_050219_1,6610 HBL1_DMSO_200M_050219_1,6610,DARKVEVLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6612 34.367 230.0 168360.0 25 0 22426.0 -1 EGKFNLMLM 9 68 549.7690474564511 1097.523541979702 2 549.7697021365166 MULTI CID FTMS 0 0 0 6611 213349.8125 0.2832214459954322 6 -0.1301345825195312 1 Oxidation (M) _EGKFNLM(Oxidation (M))LM_ ENSG00000089094|ENST00000377071|KDM2B;ENST00000538503.5_1_12:121882954-121987523:-|nuORF;nc|ENSG00000089094|Q8NHM5-2|KDM2B;nc|ENSG00000089094|Q8NHM5-3|KDM2B;nc|ENSG00000089094|Q8NHM5-4|KDM2B 7.910154910731844 0.6385446671287552 3 V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3 -1 8.072 0.0 0.0 0.73547 0.0 0.0 736.3232073623177 0.0 736.3232073623177 0.0 0.5977185236079681 0.0 0.0 0 0.0 0.0 0.0 0.0 V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 0.73547 - 23 + 1 2.108 35420.4 1.0 1590 5020 6611 HBL1_DMSO_200M_050219_1,6612 HBL1_DMSO_200M_050219_1,6612,EGKFNLMLM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6613 34.381 800.0 135410.0 25 0 22048.0 + 32312 RYIEQATVH 9 119 558.7932880498114 1115.5720231664227 2 558.7932617068291 MULTI CID FTMS 0 0 0 6611 167200.3125 0.930519276055826 -1 0.0132980346679687 2 Unmodified _RYIEQATVH_ ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000055163|Q96F07|CYFIP2 41.95555342248728 0.0647214845423414 3 [YR]{I|L}EQATVH 9 0 + 63.88 0.0 0.0 5.7262 5.7262 85.211 0.0 0.0 0.0 4.137342758552691 51.23108862755 4.137342758552691 7.95880017344075 0 1.3807196863200843 0.0 0.4247425010840047 0.3252574989159953 + + [YR]{I|L}EQATVH;[HV][VP]EQATVH;[YR]{I|L}E[AG]ATVH;[VP][HV]EQATVH;[HV][VP]E[AG]ATVH;[VP][HV]E[AG]ATVH;{[ET]|[MV]}{[QV]|[N{I|L}]|[RA]|[KV]}[MT]ATVH;{[ET]|[MV]}{[QV]|[N{I|L}]|[RA]|[KV]}[R{M(Oxidation (M))|F}]TVH;[SG]S{I|L}{I|L}[MT]ATVH;[QA]VG[YG][KG]TVH 5.7262;5.0128;4.9008;4.5851;3.8997;3.472;2.9153;2.3297;2.2041;2.0189 +;-;-;-;-;-;-;-;-;- + 446 1 2.108 87649.2 0.5600000023841858 1591 5020 6611 HBL1_DMSO_200M_050219_1,6613 HBL1_DMSO_200M_050219_1,6613,RYIEQATVH True True RYIEQATVH 34.380826 558.793261706829 822987.5625 6611.0 nc|ENSG00000055163|Q96F07|CYFIP2;;ENSG00000055163|ENST00000620254|CYFIP2;;ENSG00000273749|ENST00000617928|CYFIP1 6.9973673820495605 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6614 34.391 563.0 177270.0 25 0 19800.0 + + 45356 SYGGQQQSY 9 139 509.21725046095816 1016.4199479887164 2 509.2177917361259 MULTI CID FTMS 0 0 0 6611 164650.765625 0.0380107629231375 13 -0.4356651306152344 3 Unmodified _YSQQNQSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 39.94969957227396 0.2351327405675156 3 {[{M(Oxidation (M))|F}C]|[YS]}QQNQSY 8 -1 {[{M(Oxidation (M))|F}C]|[YS]}QQN + + 32.039 11.387 1.8359 3.1522 3.1522 50.479 0.0 0.0 0.0 0.0 17.26280941356464 0.0 0.0 0 0.805462187404089 0.0 0.7302046884880937 0.0 {[{M(Oxidation (M))|F}C]|[YS]}QQNQSY 3.1522 + + 1098 + 1 2.108 78579.0 1.0 1592 5020 6611 HBL1_DMSO_200M_050219_1,6614 HBL1_DMSO_200M_050219_1,6614,YSQQNQSY False False SYGGQQQSY 34.390695 509.217791736126 21289724.0 6611.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 7.093003114064534 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6615 34.401 567.0 38942.0 25 0 2708.7 -1 0 50 711.3098762783015 2841.210399246806 4 711.5616332888603 MULTI CID FTMS 0 0 0 6611 78185.4140625 0.8492168040118588 1 -0.0402336120605468 4 3 DNGC 4 -1 15.918 0.0 0.0 0.56024 0.0 0.0 1740.810205010281 708.2519625299436 2449.0621675402244 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DNGC 0.56024 - 35 + 1 2.108 26039.2 1.0 1593 5020 6611 HBL1_DMSO_200M_050219_1,6615 HBL1_DMSO_200M_050219_1,6615, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6618 34.421 800.0 181020.0 25 0 14664.0 + 44890 YPPNTSKV 8 177 453.2395321522326 904.4645113712652 2 453.2404357790947 MULTI CID FTMS 0 0 0 6617 145354.6875 0.7253386835836209 -11 0.2043609619140625 1 Unmodified _YPPNTSKV_ ENSG00000105835|ENST00000222553|NAMPT;ENST00000393618.5_1_7:105910735-105925330:-|nuORF;ENST00000486949.5_1_7:105912936-105925330:-|nuORF;ENST00000489358.5_1_7:105912543-105925330:-|nuORF;ENST00000489732.1_1_7:105917445-105925330:-|nuORF 30.63653989081413 0.3996269429323407 3 YPPN 4 4 49.68 0.0 0.0 5.4928 0.0 0.0 0.0 430.2279235257424 430.2279235257424 30.112653058490867 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YPPN 5.4928 + + 425 + 1 2.113 111847.4 0.8600000143051147 1594 5022 6617 HBL1_DMSO_200M_050219_1,6618 HBL1_DMSO_200M_050219_1,6618,YPPNTSKV False True YPPNTSKV 34.420628 453.240435779095 18781280.0 6617.0 ENSG00000105835|ENST00000222553|NAMPT;;ENST00000489358.5_1_7:105912543-105925330:-|nuORF;;ENST00000486949.5_1_7:105912936-105925330:-|nuORF;;ENST00000489732.1_1_7:105917445-105925330:-|nuORF;;ENST00000393618.5_1_7:105910735-105925330:-|nuORF 3.240320404370626 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6620 34.433 579.0 176120.0 25 0 12960.0 + 38617 TTESGATSTV 10 142 477.2258131266465 952.4370733200932 2 477.2256042361259 MULTI CID FTMS 0 0 0 6619 64088.48828125 0.2243673819187491 8 -0.2937583923339844 1 Unmodified _TTESGATSTV_ REV__ENSG00000261272|ENST00000561890|MUC22 7.289230182591677 0.6929195370588109 3 [{M(Oxidation (M))|F}T]E[WK]SGV 8 -1 + 20.367 0.0 0.0 2.1384 2.1384 73.969 0.0 0.0 0.0 5.484550065040279 9.569940744530356 5.484550065040279 5.697216027710109 0 0.2742275032520141 0.0 0.0 0.0 [{M(Oxidation (M))|F}T]E[WK]SGV;[{M(Oxidation (M))|F}T]{NN|[MP]|[D{I|L}]|[EV]}[KS]SGV;[{M(Oxidation (M))|F}T]E[WK]DK;[{M(Oxidation (M))|F}T]{NN|[MP]|[D{I|L}]|[EV]}[KS]DK 2.1384;1.5402;1.1058;0.50044 -;-;-;- 287 + 1 2.113 80117.8 1.0 1595 5023 6619 HBL1_DMSO_200M_050219_1,6620 HBL1_DMSO_200M_050219_1,6620,TTESGATSTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6621 34.441 436.0 340770.0 25 0 21378.0 + 34361 SLTEAAESVV 10 138 503.2588115086117 1004.5030700840234 2 503.2588989138603 MULTI CID FTMS 0 0 0 6619 145822.015625 0.8883297159643526 -2 0.0200004577636718 2 Unmodified _SLTEAAESVV_ REV__ENSG00000239998|ENST00000391738|LILRA2;REV__nc|ENSG00000239998|Q8N149-3|LILRA2;REV__nc|ENSG00000239998|Q8N149-4|LILRA2 14.838274106304384 0.5985701837916485 3 V 1 -1 16.722 0.0 0.0 1.6647 0.0 0.0 887.4236689993539 0.0 887.4236689993539 0.0 0.5237875363565792 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V 1.6647 + + 422 + 1 2.113 114992.4 1.0 1596 5023 6619 HBL1_DMSO_200M_050219_1,6621 HBL1_DMSO_200M_050219_1,6621,SLTEAAESVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6622 34.455 800.0 105550.0 25 0 16052.0 -1 CDCDDNHMC 9 106 593.1574931543084 0 593.1564208865166 PEAK CID FTMS 0 0 0 6619 109666.3515625 0.3295228312277365 29 -1.2865524291992188 3 2 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))DC(Carbamidomethyl (C))DDNHM(Oxidation (M))C_ ENSG00000175065|ENST00000308128|DSG4;nc|ENSG00000175065|Q86SJ6-2|DSG4 0.0 0.3444685223463735 3 PDATS 5 -1 27.691 0.0 0.0 2.3382 0.0 0.0 113.78038013046292 596.3020723932249 710.0824525236878 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 PDATS 2.3382 - 68 + 1 2.113 66549.4 0.5799999833106995 1597 5023 6619 HBL1_DMSO_200M_050219_1,6622 HBL1_DMSO_200M_050219_1,6622,CDCDDNHMC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6623 34.468 800.0 73340.0 25 0 5186.5 -1 STMSTNGIPR 10 117 540.2607356747474 1078.5069184162946 2 540.2612792849541 MULTI CID FTMS 0 0 0 6619 93379.265625 0.709940868285969 -12 0.2204437255859375 4 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 22.65808497894818 0.4596126414678359 3 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR 10 -1 + 36.225 0.0 0.0 3.3588 3.3588 68.093 0.0 0.0 0.0 7.269987279362628 0.3476210625921254 0.3476210625921254 0.3476210625921254 0 0.3494850021680094 0.0 0.0 0.2887254899964357 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}S[KT]{[QS]|[NT]}PP;{[MG]|[TS]}{M(Oxidation (M))|F}STN[R{I|L}]GP;{[MG]|[TS]}{M(Oxidation (M))|F}S[KT][QP]SP;[HD][RD]N{[VA]|[{I|L}G]}PR;[HD][RD]N{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG[R{I|L}]GP 3.3588;3.3266;2.5091;2.4768;1.8785;1.7791;1.095;0.96966;0.93743;0.9294 +;-;-;-;-;-;-;-;-;- + 185 + 1 2.113 52795.8 0.5699999928474426 1598 5023 6619 HBL1_DMSO_200M_050219_1,6623 HBL1_DMSO_200M_050219_1,6623,STMSTNGIPR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6626 34.488 800.0 131740.0 25 0 12794.0 + 37185 TIEMSESRMMP 11 135 437.863576720333 1310.568900761199 3 437.8636352419853 MULTI CID FTMS 0 0 0 6625 109857.046875 0.3057946065752235 -23 0.6546974182128906 1 Unmodified _TIEMSESRMMP_ REV__ENSG00000075539|ENST00000358350|FRYL 2.843284757254958 0.8617331327080043 3 VE{[YC]|[HE]}C{M(Oxidation (M))|F}M 7 -1 20.555 0.0 0.0 1.5684 0.0 0.0 417.259569236525 0.0 417.259569236525 0.0 9.005444963529754 0.0 0.0 0 0.2790373427484316 0.0 0.805462187404089 0.0 VE{[YC]|[HE]}C{M(Oxidation (M))|F}M 1.5684 - 161 1 2.113 85751.2 0.8199999928474426 1599 5025 6625 HBL1_DMSO_200M_050219_1,6626 HBL1_DMSO_200M_050219_1,6626,TIEMSESRMMP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6627 34.491 100.0 444340.0 25 0 40264.0 + 4212 DAPKDYRQV 9 86 364.5208430808685 1090.5406998428057 3 364.5202819705009 MULTI CID FTMS 0 0 0 6625 221685.171875 0.7729464485439874 -3 0.0677604675292968 2 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 12.240655878213236 0.5053430591993562 3 {[DA]|[EG]}PKD 5 4 43.456 0.0 0.0 3.9848 0.0 0.0 0.0 561.2793062799436 561.2793062799436 31.86181873724173 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}PKD 3.9848 + + 43 + 1 2.113 42521.1 1.0 1600 5025 6625 HBL1_DMSO_200M_050219_1,6627 HBL1_DMSO_200M_050219_1,6627,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6629 34.507 800.0 175570.0 25 0 18704.0 + 4215 DAPKDYRQV 9 143 546.276318452949 1090.538083972698 2 546.2773315310478 MULTI CID FTMS 0 0 0 6628 103010.2421875 0.4548651274775593 -11 0.2255630493164062 1 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 24.99096001346401 0.2132109383330889 3 DAPKD 5 4 56.37 0.0 0.0 5.169 0.0 0.0 0.0 561.2797073271236 561.2797073271236 25.688716492471904 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + DAPKD 5.169 + + 670 + 1 2.113 112418.3 0.7599999904632568 1601 5026 6628 HBL1_DMSO_200M_050219_1,6629 HBL1_DMSO_200M_050219_1,6629,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6630 34.52 800.0 171550.0 25 0 15232.0 + 3833 DAITPKREV 9 127 514.7902758133847 1027.565998693569 2 514.7906982302666 MULTI CID FTMS 0 0 0 6628 160534.828125 0.5965925996294403 -3 0.0699005126953125 2 Unmodified _DAITPKREV_ ENSG00000143748|ENST00000281701|NVL;nc|ENSG00000143748|O15381-2|NVL;nc|ENSG00000143748|O15381-3|NVL;nc|ENSG00000143748|O15381-4|NVL;nc|ENSG00000143748|O15381-5|NVL 49.74193281347159 0.0409357517904489 3 DA{I|L}VTKEGE 9 5 102.39 0.0 0.0 9.9644 0.0 0.0 0.0 82.06689630679921 82.06689630679921 90.40063582576384 0.0 0.0 0.0 0 1.424742501084005 2.0 1.301203852579394 0.3807196863200844 DA{I|L}VTKEGE 9.9644 - 1222 + 1 2.113 112319.0 0.7099999785423279 1602 5026 6628 HBL1_DMSO_200M_050219_1,6630 HBL1_DMSO_200M_050219_1,6630,DAITPKREV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6631 34.526 317.0 210810.0 25 0 12379.0 + 34722 SPYHSPKV 8 100 457.7400014521145 913.465449971029 2 457.7405578494072 MULTI CID FTMS 0 0 0 6628 158284.453125 0.5949978549968471 -3 0.0699005126953125 3 Unmodified _SPYHSPKV_ ENSG00000198807|ENST00000361487|PAX9;ENST00000557107.1_1_14:37135665-37140295:+|nuORF 57.72198328787511 0.1146897545241271 3 SPYHSPKV 8 0 + 71.021 0.0 0.0 7.7749 7.7749 88.872 0.0 0.0 0.0 43.39668670472497 11.013874343345194 11.013874343345194 5.440680443502757 0 1.0941876774005248 1.6989700043360187 0.3807196863200844 0.0 + + SPYHSPKV;SPYHSKPV;SPYHSKVP;[PS]HYSPKV;[VG]{[QC]|[C(Carbamidomethyl (C))A]}PSPKV;[PS]HY[KP]SV;[PS]V{[CA]|SS}NPKV;[PS]V[C(Carbamidomethyl (C))Q]PKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HSSPKV;[VG]{[QC]|[C(Carbamidomethyl (C))A]}P[KP]SV 7.7749;7.1793;6.5197;4.7367;4.2874;4.2047;3.9426;3.7557;3.3548;3.3386 +;-;-;-;-;-;-;-;-;- + 501 + 1 2.113 56871.4 1.0 1603 5026 6628 HBL1_DMSO_200M_050219_1,6631 HBL1_DMSO_200M_050219_1,6631,SPYHSPKV True True SPYHSPKV 34.526232 457.740557849407 2711496.25 6628.0 ENST00000557107.1_1_14:37135665-37140295:+|nuORF;;ENSG00000198807|ENST00000361487|PAX9 7.130369027455648 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6633 34.531 17.0 3364100.0 25 0 449690.0 + 35920 SVPDTVHHV 9 60 495.7538602150016 989.4931674968032 2 495.7538940310478 MULTI CID FTMS 0 0 0 6632 3680356.0 0.7559240328754068 1 -0.0808486938476562 1 Unmodified _SVPDTVHHV_ ENSG00000079785|ENST00000233084|DDX1;ENST00000459706.1_1_2:15757448-15761320:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 44.40701690623563 0.0526327925666318 3 [VS]PDTVH[HV] 9 0 + 64.843 0.0 0.0 6.5532 6.5532 93.362 0.0 0.0 0.0 34.90463059526341 7.147642715192504 7.147642715192504 38.54880034054716 0 0.4247425010840047 2.0 0.7742275032520141 0.0 + + [VS]PDTVH[HV];[DP]T[HV]HV[VS];[R{M(Oxidation (M))|F}]H{[SA]|[TG]}H[HV];[PS]E[HV]HV[VS] 6.5532;2.6573;1.8585;1.1183 +;-;-;- + 109 + 1 2.113 52857.3 1.0 1604 5027 6632 HBL1_DMSO_200M_050219_1,6633 HBL1_DMSO_200M_050219_1,6633,SVPDTVHHV True True SVPDTVHHV 34.530794 495.753894031048 133072872.0 6632.0 ENST00000459706.1_1_2:15757448-15761320:+|nuORF;;nc|ENSG00000079785|Q92499-2|DDX1;;nc|ENSG00000079785|Q92499-3|DDX1;;ENSG00000079785|ENST00000233084|DDX1 9.719502766927084 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6634 34.538 432.0 279880.0 25 0 27988.0 28079 PPHPPPPPP 9 121 466.7531945699682 931.4918362067364 2 466.7531921267509 MULTI CID FTMS 0 0 0 6632 161678.875 0.2954796849449695 19 -1.0283088684082031 2 Unmodified _PPHPPPPPP_ ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000066855|ENST00000262146|MTFR1;ENSG00000163064|ENST00000295206|EN1;ENSG00000175879|ENST00000313173|HOXD8;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000066855|Q15390-2|MTFR1;nc|ENSG00000175879|P13378-2|HOXD8;REV__nc|ENSG00000182095|O15417-2|TNRC18 45.7499826716795 0.0496882803020414 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPYK 8 3 + 34.976 0.0 0.0 3.7549 3.7549 74.114 0.0 0.0 0.0 3.2525749891599567 0.7758487730197885 0.7758487730197885 3.2525749891599567 0 0.8358955865873612 0.0 0.3252574989159953 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPYK;{[HG]|PP}HPPPYK;{[NV]|[RG]}{[QS]|[NT]}PPYK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]PYK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YK]YK;{[HG]|PP}H[YK]YK;{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[RN]GV;[HV]{[ET]|[MV]}RYK 3.7549;3.4057;1.661;1.351;1.0278;0.67861;0.38761;0.15062 -;-;-;-;-;-;-;- 248 1 2.113 93648.3 1.0 1605 5027 6632 HBL1_DMSO_200M_050219_1,6634 HBL1_DMSO_200M_050219_1,6634,PPHPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6635 34.54 76.0 1648200.0 25 0 317360.0 + 20078 LIVKDKTVGV 10 102 357.89739830097307 1070.6703655031192 3 357.8970214724541 MULTI CID FTMS 0 0 0 6632 669211.1875 0.0449468778359984 -3 0.0578498840332031 3 Unmodified _LIVKDKTVGV_ ENSG00000182271|ENST00000328886|TMIGD1 39.21299971606389 0.1658776112144286 3 {I|L}{I|L}DKVKEKV 9 5 + 91.313 0.0 0.0 8.5286 8.5286 82.145 0.0 0.0 0.0 38.767258899379215 12.252684618815096 12.252684618815096 0.2287874528033739 0 0.25 2.0 1.2134679910804405 1.1307196863200843 {I|L}{I|L}DKVKEKV;{I|L}{I|L}DKKVEKV;{I|L}{I|L}DVKKEKV;{I|L}{I|L}VDKKEKV;{I|L}{I|L}V[SG]VKEKV;{I|L}{I|L}V[SG]KVEKV;{I|L}VEKVKEKV;{I|L}VEKKVEKV;{I|L}VEVKKEKV;{I|L}V{I|L}DKKEKV 8.5286;8.5072;7.8347;7.7857;7.6197;7.5983;6.3782;6.3568;5.6843;5.6353 -;-;-;-;-;-;-;-;-;- 544 + 1 2.113 106574.9 1.0 1606 5027 6632 HBL1_DMSO_200M_050219_1,6635 HBL1_DMSO_200M_050219_1,6635,LIVKDKTVGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6636 34.544 214.0 605460.0 25 0 36670.0 + 24773 MPHPATGKTV 10 134 519.7736593458334 1037.532765758467 2 519.7734863162041 MULTI CID FTMS 0 0 0 6632 432610.84375 0.5471922514029869 -3 0.0578498840332031 4 Unmodified _MPHPATGKTV_ ENSG00000070814|ENST00000643257|TCOF1;ENST00000515035.5_1_5:149748314-149754605:+|nuORF;nc|ENSG00000070814|Q13428-2|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;nc|ENSG00000070814|Q13428-5|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428|TCOF1 63.22749603027936 0.0281198777558511 3 {NN|[MP]|[D{I|L}]|[EV]}H{I|L}{I|L}PMTV 9 5 + 50.573 0.0 0.0 4.8744 4.8744 76.273 0.0 0.0 0.0 2.7501217982944297 4.633702839612191 2.7501217982944297 2.7501217982944297 0 1.5 1.3979400086720375 0.8494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}H{I|L}{I|L}PMTV;{[TV]|[{I|L}S]}[HV]HV{M(Oxidation (M))|F}TV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}HPMTV;{[TV]|[{I|L}S]}[HV]HVT{M(Oxidation (M))|F}V;[KG]T{[WT]|[RM]}V{M(Oxidation (M))|F}TV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}TTYTV;[KG]T{[WT]|[RM]}VT{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{I|L}{I|L}PMTV;{[TV]|[{I|L}S]}YRHYTV;{[TV]|[{I|L}S]}[HV]HTV{M(Oxidation (M))|F}V 4.8744;4.6093;4.3691;4.2478;4.1185;3.8431;3.757;3.5695;3.4127;3.2047 -;-;-;-;-;-;-;-;-;- 1191 1 2.113 102115.1 1.0 1607 5027 6632 HBL1_DMSO_200M_050219_1,6636 HBL1_DMSO_200M_050219_1,6636,MPHPATGKTV True True MPHPATGKTV 34.544311 519.773486316204 23907134.0 6632.0 nc|ENSG00000070814|Q13428-7|TCOF1;;nc|ENSG00000070814|Q13428-4|TCOF1;;ENST00000515035.5_1_5:149748314-149754605:+|nuORF;;ENSG00000070814|ENST00000643257|TCOF1;;nc|ENSG00000070814|Q13428-2|TCOF1;;nc|ENSG00000070814|Q13428-5|TCOF1;;nc|ENSG00000070814|Q13428|TCOF1;;nc|ENSG00000070814|Q13428-6|TCOF1;;nc|ENSG00000070814|Q13428-8|TCOF1 7.156349341074626 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6637 34.553 464.0 293170.0 25 0 48487.0 + 41420 VPLEKAKQV 9 132 506.3138686351487 1010.6131843370974 2 506.3135864138603 MULTI CID FTMS 0 0 0 6632 168780.734375 0.8332206761850965 -2 0.0539741516113281 5 Unmodified _VPLEKAKQV_ ENSG00000149658|ENST00000370339|YTHDF1;ENSG00000185728|ENST00000539294|YTHDF3;ENSG00000198492|ENST00000373812|YTHDF2;ENST00000604759.1_1_14:39684672-39685536:+|nuORF;nc|ENSG00000198492|Q9Y5A9-2|YTHDF2 34.93206674587334 0.1032771302489716 3 VP{I|L}EKAKQV 9 0 + 62.379 0.0 0.0 6.1724 6.1724 76.559 0.0 0.0 0.0 30.457574905606744 0.2555410447238699 0.2555410447238699 0.2555410447238699 0 1.329689690656103 1.3979400086720375 0.0 0.7134679910804405 + + VP{I|L}EKAKQV;VP{I|L}EKAKVQ;VP{I|L}EKAK[AG]V;VP{I|L}[VP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QV;VP{I|L}[VP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VQ;VP{I|L}[VP]{[QV]|[N{I|L}]|[RA]|[KV]}YP;V[{I|L}T]{I|L}[KP]VNQ;V[{I|L}T]{I|L}[NP]KQV;V[{I|L}T]{I|L}[NP]KVQ;V[{I|L}T]{I|L}[KP]NQV 6.1724;6.1471;4.9755;4.3139;4.2886;3.5394;1.5304;1.2721;1.2468;0.85185 +;-;-;-;-;-;-;-;-;- + 539 + 1 2.113 109787.5 1.0 1608 5027 6632 HBL1_DMSO_200M_050219_1,6637 HBL1_DMSO_200M_050219_1,6637,VPLEKAKQV True True VPLEKAKQV 34.552528 506.31358641386 1174867.5 6632.0 ENSG00000185728|ENST00000539294|YTHDF3;;ENSG00000149658|ENST00000370339|YTHDF1;;ENSG00000198492|ENST00000373812|YTHDF2;;ENST00000604759.1_1_14:39684672-39685536:+|nuORF;;nc|ENSG00000198492|Q9Y5A9-2|YTHDF2 6.934890111287435 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6638 34.559 363.0 434990.0 25 0 17249.0 + 3835 DAITPKREV 9 163 343.52959771310657 1027.5669637395197 3 343.5292236208916 MULTI CID FTMS 0 0 0 6632 163326.828125 0.6843721626122549 -1 0.0357513427734375 6 Unmodified _DAITPKREV_ ENSG00000143748|ENST00000281701|NVL;nc|ENSG00000143748|O15381-2|NVL;nc|ENSG00000143748|O15381-3|NVL;nc|ENSG00000143748|O15381-4|NVL;nc|ENSG00000143748|O15381-5|NVL 22.774965066869 0.2414061210083823 3 {[DA]|[EG]}{I|L}TPK 6 3 57.14 0.0 0.0 5.5607 0.0 0.0 0.0 399.19931970767817 399.19931970767817 35.4169075853042 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.4247425010840047 0.0 + {[DA]|[EG]}{I|L}TPK 5.5607 + + 388 + 1 2.113 131559.6 1.0 1609 5027 6632 HBL1_DMSO_200M_050219_1,6638 HBL1_DMSO_200M_050219_1,6638,DAITPKREV False True DAITPKREV 34.559063 343.529223620892 3170118.625 6632.0 nc|ENSG00000143748|O15381-5|NVL;;nc|ENSG00000143748|O15381-2|NVL;;nc|ENSG00000143748|O15381-4|NVL;;ENSG00000143748|ENST00000281701|NVL;;nc|ENSG00000143748|O15381-3|NVL 5.69466511408488 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6639 34.573 800.0 271840.0 25 0 19376.0 -1 0 100 628.7847795790462 2511.110012449785 4 629.0358764529228 MULTI CID FTMS 0 0 0 6632 154043.1875 0.7103421417915475 -3 0.0578498840332031 7 3 {[WN]|[YH]}KKGDDN 8 -1 32.44 0.0 0.0 1.2919 0.0 0.0 0.0 1550.6832295730849 1550.6832295730849 21.470996953088388 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.7302046884880937 {[WN]|[YH]}KKGDDN 1.2919 - 474 1 2.113 160581.2 0.6499999761581421 1610 5027 6632 HBL1_DMSO_200M_050219_1,6639 HBL1_DMSO_200M_050219_1,6639, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6640 34.587 800.0 237220.0 25 0 21295.0 + 21188 LPDATSSHRTV 11 127 592.307062569692 1182.599572206184 2 592.3072997927666 MULTI CID FTMS 0 0 0 6632 129312.9375 0.0875727678987508 -10 0.2094268798828125 8 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 77.86735373965114 0.0096049314831361 3 {I|L}PDATSSHRS{I|L} 11 2 + 108.51 0.0 0.0 9.1757 9.1757 98.391 0.0 0.0 0.0 68.54670692083396 7.072585568700987 7.072585568700987 37.04806094493546 0 1.5969100130080562 1.6989700043360187 2.0356668758921828 0.3494850021680094 {I|L}PDATSSHRS{I|L};{I|L}PD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SHRS{I|L};{I|L}PW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}HRS{I|L};V[EP]ATSSHRS{I|L};[{I|L}P]DA[RD]TWP{I|L};[{I|L}P]DAT[RD]WP{I|L};[DP]{I|L}A[RD]TWP{I|L};[{I|L}P]DAT[WR]DP{I|L};[DP]{I|L}AT[RD]WP{I|L};{I|L}PD[WP]{[CP]|[EA]}RS{I|L} 9.1757;6.0429;5.7824;4.7325;4.3161;4.2298;4.1479;4.0809;4.0615;4.0539 -;-;-;-;-;-;-;-;-;- 2292 + 1 2.113 143682.9 0.6200000047683716 1611 5027 6632 HBL1_DMSO_200M_050219_1,6640 HBL1_DMSO_200M_050219_1,6640,LPDATSSHRTV True True LPDATSSHRTV 34.586734 592.307299792767 323738732.0 6632.0 ENSG00000172534|ENST00000310441|HCFC1;;nc|ENSG00000172534|P51610-2|HCFC1;;nc|ENSG00000172534|P51610-4|HCFC1 8.567252000172934 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6641 34.593 371.0 406650.0 25 0 68587.0 + 4093 DANSQSVKV 9 134 474.243274652987 946.471996372774 2 474.2426025271416 MULTI CID FTMS 0 0 0 6632 126875.046875 0.1880761915826763 -3 0.0578498840332031 9 Unmodified _DANSQSVKV_ ENSG00000164953|ENST00000453321|TMEM67;ENST00000474944.5_1_8:94767142-94822123:+|nuORF 89.40071534611396 0.0152361884002446 3 {[DA]|[EG]}NSQSVKV 9 0 + 86.793 0.0 0.0 9.1702 9.1702 86.827 0.0 0.0 0.0 22.92215251512122 2.688453122925808 2.688453122925808 2.688453122925808 0 1.305462187404089 2.0 0.3494850021680094 1.1861818737241734 + + {[DA]|[EG]}NSQSVKV;{[DA]|[EG]}NSQSVVK;{[DA]|[EG]}NSQVSKV;{[DA]|[EG]}NSQVSVK;{[DA]|[EG]}NS[AG]SVKV;{[DA]|[EG]}GGSQSVKV;{[DA]|[EG]}NS[AG]SVVK;{[DA]|[EG]}GGSQSVVK;{[DA]|[EG]}NS[AG]VSKV;{[DA]|[EG]}GGSQVSKV 9.1702;8.8861;8.5341;8.25;8.1973;8.1973;7.9132;7.9132;7.5612;7.5612 +;-;-;-;-;-;-;-;-;- + 761 + 1 2.113 116840.2 1.0 1612 5027 6632 HBL1_DMSO_200M_050219_1,6641 HBL1_DMSO_200M_050219_1,6641,DANSQSVKV True True DANSQSVKV 34.593392 474.242602527142 2915515.5 6632.0 ENST00000474944.5_1_8:94767142-94822123:+|nuORF;;ENSG00000164953|ENST00000453321|TMEM67 8.096795399983725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6642 34.607 800.0 364820.0 25 0 59483.0 + 22194 LPQEQRSV 8 152 478.76185843639854 955.5091639395972 2 478.7613098025322 MULTI CID FTMS 0 0 0 6632 105445.7578125 0.0970744682381333 -4 0.10565185546875 10 Unmodified _LPQEQRSV_ ENSG00000185043|ENST00000328649|CIB1;nc|ENSG00000185043|Q99828-2|CIB1 65.23502041540118 0.1164516490932339 3 {I|L}PQEQRSV 8 0 + 84.554 0.0 0.0 8.8491 8.8491 94.929 0.0 0.0 0.0 59.84911163201181 9.371987629411294 9.371987629411294 9.262137858390815 0 0.6382104921644451 1.6989700043360187 1.086696871556164 0.7742275032520141 + + {I|L}PQEQRSV;{I|L}PQE[AG]RSV;{I|L}P[AG]EQRSV;{I|L}PQE{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L};{I|L}P[AG]E[AG]RSV;{I|L}PQE{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P;{I|L}PQEV{[QD]|[EN]|[WG]|[KD]|[RS]}K;{I|L}P[AG]EV{[QD]|[EN]|[WG]|[KD]|[RS]}K;{I|L}P[AG]E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L};{I|L}PVQ[WQ]SV 8.8491;7.8798;7.8798;7.1291;6.9161;6.7333;6.6827;5.7134;5.3495;5.241 +;-;-;-;-;-;-;-;-;- + 1250 + 1 2.113 221736.3 0.5699999928474426 1613 5027 6632 HBL1_DMSO_200M_050219_1,6642 HBL1_DMSO_200M_050219_1,6642,LPQEQRSV True True LPQEQRSV 34.607204 478.761309802532 9802830.0 6632.0 ENSG00000185043|ENST00000328649|CIB1;;nc|ENSG00000185043|Q99828-2|CIB1 6.772165298461914 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6644 34.612 19.0 3047600.0 25 0 470370.0 + 35922 SVPDTVHHV 9 88 330.83842919132684 989.4934581741804 3 330.8381835818291 MULTI CID FTMS 0 0 0 6643 2438065.0 0.2452727404423644 3 -0.1072578430175781 1 Unmodified _SVPDTVHHV_ ENSG00000079785|ENST00000233084|DDX1;ENST00000459706.1_1_2:15757448-15761320:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 30.22481116460888 0.1466181017706357 3 DTVHVH 6 5 26.702 0.0 0.0 2.6985 0.0 0.0 283.1532182510504 0.0 283.1532182510504 0.0 -2.8869516921487204 -2.8869516921487204 0.0 0 0.0 0.0 0.3494850021680094 0.0 DTVHVH 2.6985 - 234 + 1 2.116 53146.1 1.0 1614 5028 6643 HBL1_DMSO_200M_050219_1,6644 HBL1_DMSO_200M_050219_1,6644,SVPDTVHHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6645 34.613 22.0 3050600.0 25 0 506660.0 + 17664 KPTGARPSAL 10 62 499.2931313303457 996.5717097274916 2 499.2930786013603 MULTI CID FTMS 0 0 0 6643 2854828.5 0.9229962322194342 3 -0.1072578430175781 2 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 15.248480904072842 0.5916873121453583 3 KPT 3 7 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3534286098177 667.3534286098177 21.53212513775344 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPT 3.9829 + + 24 + 1 2.116 57450.2 1.0 1615 5028 6643 HBL1_DMSO_200M_050219_1,6645 HBL1_DMSO_200M_050219_1,6645,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6646 34.614 36.0 1508000.0 25 0 148200.0 + 21183 LPDATSSHRTV 11 75 395.2070921144592 1182.5994469435775 3 395.2068054080009 MULTI CID FTMS 0 0 0 6643 1333652.375 0.16913978119605 -9 0.2600326538085937 3 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 26.345799442569017 0.4735952257064628 3 {I|L}PDATS{I|L}TTA 10 4 81.298 0.0 0.0 6.8745 0.0 0.0 0.0 209.05695520572505 209.05695520572505 58.39307572311597 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.5994850021680094 0.0 {I|L}PDATS{I|L}TTA 6.8745 - 387 + 1 2.116 52594.8 1.0 1616 5028 6643 HBL1_DMSO_200M_050219_1,6646 HBL1_DMSO_200M_050219_1,6646,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6647 34.615 41.0 1596800.0 25 0 152910.0 + 14766 ILDKKVEKV 9 80 536.3425235443514 1070.6704941555026 2 536.3423339724541 MULTI CID FTMS 0 0 0 6643 1248219.375 0.4326361680579297 -2 0.1166000366210937 4 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 55.46699784157472 0.0285918206075701 3 {I|L}{I|L}DKKVEKV 9 0 + 75.869 0.0 0.0 7.0861 7.0861 94.688 0.0 0.0 0.0 21.01219677964764 6.751736484954378 6.751736484954378 34.30039825851489 0 1.7544321917401078 2.0 0.3252574989159953 0.0 + + {I|L}{I|L}DKKVEKV;{[QD]|[EN]|[WG]|[KD]|[RS]}KV{I|L}{I|L}EKV;{[QD]|[EN]|[WG]|[KD]|[RS]}KVEK{I|L}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}KVE{I|L}{I|L}KV;VE{I|L}KKVEKV;{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}V{I|L}EKV;{[QD]|[EN]|[WG]|[KD]|[RS]}KV{I|L}E{I|L}KV;{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}DK{I|L}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}KVE{I|L}K{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}KV{I|L}EK{I|L}V 7.0861;3.8825;3.8003;3.5458;3.459;3.4368;3.4303;3.3547;3.3547;3.2392 +;-;-;-;-;-;-;-;-;- + 533 + 1 2.116 55521.2 1.0 1617 5028 6643 HBL1_DMSO_200M_050219_1,6647 HBL1_DMSO_200M_050219_1,6647,ILDKKVEKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6648 34.617 54.0 1286000.0 25 0 253790.0 + 32640 SAYRVKTV 8 87 308.51508690401374 922.5234313122412 3 308.5149108767509 MULTI CID FTMS 0 0 0 6643 1145463.0 1.0 0 0.0 5 Unmodified _SAYRVKTV_ ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35455862-35480681:-|nuORF;nc|ENSG00000163867|O95789-1|ZMYM6 18.13498045792455 0.6430038125133779 3 {[SA]|[TG]}V 3 5 31.325 0.0 0.0 3.3955 0.0 0.0 0.0 662.3654268854124 662.3654268854124 14.558998880390348 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[SA]|[TG]}V 3.3955 - 30 + 1 2.116 66122.2 1.0 1618 5028 6643 HBL1_DMSO_200M_050219_1,6648 HBL1_DMSO_200M_050219_1,6648,SAYRVKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6649 34.619 94.0 772870.0 25 0 58908.0 35457 STLKGAGA 8 95 352.70080005713606 703.3870471810721 2 352.7003661990166 MULTI CID FTMS 0 0 0 6643 758803.0625 0.332482112672554 -3 0.1348228454589843 6 Unmodified _STLKGAGA_ ENST00000335154.9_1_12:50036614-50037331:-|nuORF 23.1484247019978 0.5573009939494978 3 ST{I|L}REV 6 5 + 61.147 0.0 0.0 8.6932 8.6932 92.149 0.0 0.0 0.0 39.35641325667099 8.600988783863954 8.600988783863954 7.544321917401078 0 0.805462187404089 1.5228787452803376 0.3252574989159953 0.3054621874040891 ST{I|L}REV;ST{I|L}VWV;STV{I|L}WV;STV[KQ]AA;[{I|L}T]RSEV;{[MG]|[TS]}{I|L}REV;[R{I|L}]TSEV 8.6932;7.6206;7.1926;3.5574;3.0339;1.9725;1.9388 -;-;-;-;-;-;- 116 + 1 2.116 61188.8 1.0 1619 5028 6643 HBL1_DMSO_200M_050219_1,6649 HBL1_DMSO_200M_050219_1,6649,STLKGAGA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6651 34.623 56.0 961880.0 25 0 125250.0 + -1 YMVLKSKL 8 85 333.1979866606353 996.572130582106 3 333.1975280642509 MULTI CID FTMS 0 0 0 6650 990161.1875 0.7880583135869977 4 -0.1775054931640625 1 Oxidation (M) _YM(Oxidation (M))VLKSKL_ REV__ENST00000258400.3_1_2:231973202-231973277:-|nuORF 15.847184025352805 0.6768015514314958 3 [KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]AK{I|L} 9 -1 [KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]AK + + 14.604 -3.0714 -0.35488 1.4654 1.4654 48.504 0.0 0.0 0.0 0.0 -4.068043921522534 -4.068043921522534 0.0 0 0.0 0.0 0.0 0.0 [KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]AK{I|L} 1.4654 - 48 + 1 2.116 49692.6 1.0 1620 5029 6650 HBL1_DMSO_200M_050219_1,6651 HBL1_DMSO_200M_050219_1,6651,YMVLKSKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6652 34.625 84.0 579060.0 25 0 54686.0 + 34786 SQDPGTHVV 9 76 470.23010219428033 938.4456514553608 2 470.2301818728447 MULTI CID FTMS 0 0 0 6650 584624.1875 0.0221674142898602 22 -1.0847434997558594 2 Unmodified _SQDPGTHVV_ ENSG00000130935|ENST00000253247|NOL11 37.97399986684836 0.0865783450051559 3 {[QS]|[NT]}D 3 6 31.254 0.0 0.0 3.3305 0.0 0.0 0.0 605.3056985244433 605.3056985244433 19.47173519459872 0.0 0.0 0.0 0 1.0 0.0 0.2742275032520141 0.805462187404089 + {[QS]|[NT]}D 3.3305 + + 79 1 2.116 44303.5 1.0 1621 5029 6650 HBL1_DMSO_200M_050219_1,6652 HBL1_DMSO_200M_050219_1,6652,SQDPGTHVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6653 34.628 167.0 535840.0 25 0 28815.0 -1 0 49 503.2290023007317 2511.1086291706583 5 503.4301635622978 MULTI CID FTMS 0 0 0 6650 329822.84375 1.0 0 0.0 3 3 {I|L} 1 -1 3.9794 0.0 0.0 0.15847 0.0 0.0 1705.692260617727 689.3103731744749 2395.002633792202 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.15847 - 63 + 1 2.116 80291.9 1.0 1622 5029 6650 HBL1_DMSO_200M_050219_1,6653 HBL1_DMSO_200M_050219_1,6653, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6654 34.634 305.0 527860.0 25 0 44063.0 + 44856 YPPHVQKV 8 166 323.1837477176532 966.5294137531596 3 323.1834594607353 MULTI CID FTMS 0 0 0 6650 203339.515625 0.2846612596087753 -10 0.2714576721191406 4 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 21.74664581756881 0.5868176546531598 3 YPPHVQKV 8 0 + 63.907 0.0 0.0 6.612 6.612 85.337 0.0 0.0 0.0 29.42008053022313 4.918005372875925 4.918005372875925 4.918005372875925 0 0.0 1.3010299956639813 0.0 0.3252574989159953 + + YPPHVQKV;YPPHVQVK;YPPHV[AG]KV;YPPHV[AG]VK 6.612;6.1032;5.6537;5.1449 +;-;-;- + 224 + 1 2.116 128174.8 1.0 1623 5029 6650 HBL1_DMSO_200M_050219_1,6654 HBL1_DMSO_200M_050219_1,6654,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6655 34.648 800.0 139170.0 25 0 12514.0 -1 ENAAGMPWRW 10 134 617.2779566376986 1232.541360342197 2 617.2770263552666 MULTI CID FTMS 0 0 0 6650 153178.03125 1.0 0 0.0 5 Oxidation (M) _ENAAGM(Oxidation (M))PWRW_ ENST00000372991.8_1_6:41902761-41902899:-|nuORF 27.628801355627647 0.3479284626772844 3 [AG]DAQ{[DS]|[MA]|[CV]|TT}AQQDK 12 -1 + 72.481 0.0 0.0 5.8806 5.8806 76.408 0.0 0.0 0.0 8.160364270168813 43.44375843692457 8.160364270168813 0.591214521186572 0 0.3807196863200844 2.0 0.9634679910804403 1.1237125054200234 [AG]DAQ{[DS]|[MA]|[CV]|TT}AQQDK;[AG]DAQ{[WS]|[C(Carbamidomethyl (C)){I|L}]}QQDK;[AG]DAG{[WS]|[C(Carbamidomethyl (C)){I|L}]}AQQDK;[AG]NA{[DS]|[MA]|[CV]|TT}EAQQDK;[AG]DAG[MN]VQQDK;[AG]QG{[DS]|[MA]|[CV]|TT}EAQQDK;[AG]DAGA{[DS]|[MA]|[CV]|TT}AQQDK;[AG]DAGA{[WS]|[C(Carbamidomethyl (C)){I|L}]}QQDK;[AG]GEQ{[DS]|[MA]|[CV]|TT}AQQDK;[AG]GQ{[DS]|[MA]|[CV]|TT}EAQQDK 5.8806;5.8326;5.802;5.7191;5.7016;5.6834;5.6082;5.5577;5.5328;5.4899 -;-;-;-;-;-;-;-;-;- 7218 1 2.116 87873.8 0.6600000262260437 1624 5029 6650 HBL1_DMSO_200M_050219_1,6655 HBL1_DMSO_200M_050219_1,6655,ENAAGMPWRW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6656 34.652 261.0 273190.0 25 0 35318.0 + 16438 KAFTCITSV 9 96 485.25872192531614 968.5028909174324 2 485.2596008181572 MULTI CID FTMS 0 0 0 6650 114569.6953125 0.2800128411353815 -8 0.217926025390625 6 Unmodified _KAFTCITSV_ ENSG00000196646|ENST00000343979|ZNF136;ENST00000464860.1_1_19:12296590-12298813:+|nuORF 14.838274106304384 0.4350285940865338 3 [VG]AHN[KG]TSV 10 6 [VG]AHN[KG]T + + 20.177 11.848 1.5499 2.0833 2.0833 48.903 0.0 0.0 0.0 0.0 12.35336329333122 0.0 0.0 0 0.5 0.0 0.1989700043360188 0.0 [VG]AHN[KG]TSV 2.0833 - 245 + 1 2.116 61636.0 1.0 1625 5029 6650 HBL1_DMSO_200M_050219_1,6656 HBL1_DMSO_200M_050219_1,6656,KAFTCITSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6657 34.666 800.0 133440.0 25 0 11756.0 + -1 LYQPRASEM 9 115 555.7659034527273 1109.5172539722546 2 555.7664062380791 MULTI CID FTMS 0 0 0 6650 92691.4140625 0.5052420911914949 -2 0.0922737121582031 7 Oxidation (M) _LYQPRASEM(Oxidation (M))_ nc|ENSG00000168081|Q13519-2|PNOC;ENSG00000168081|ENST00000301908|PNOC 39.94969957227396 0.0757326808254658 3 {I|L}YQ 3 -1 53.94 0.0 0.0 4.8616 0.0 0.0 0.0 702.2884506356123 702.2884506356123 34.64841568716295 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3494850021680094 {I|L}YQ 4.8616 + + 258 + 1 2.116 84639.9 0.5699999928474426 1626 5029 6650 HBL1_DMSO_200M_050219_1,6657 HBL1_DMSO_200M_050219_1,6657,LYQPRASEM False False LYQPRASEM 34.6663 555.766406238079 1092129.25 6650.0 nc|ENSG00000168081|Q13519-2|PNOC;;ENSG00000168081|ENST00000301908|PNOC 4.028993606567383 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6659 34.674 287.0 233060.0 25 0 19927.0 27265 PHEIAPIE 8 110 453.2395321522326 904.4645113712652 2 453.7402526736259 MULTI CID FTMS 0 0 0 6658 194251.015625 0.9890673307724748 -1 0.0475959777832031 1 Unmodified _PHEIAPIE_ ENST00000372358.9_1_9:133579417-133579585:+|nuORF 10.183394434864962 0.7604730176254005 3 T{M(Oxidation (M))|F} 2 8 24.024 0.0 0.0 2.6561 0.0 0.0 638.3707136191152 0.0 638.3707136191152 0.0 13.017419478231655 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 T{M(Oxidation (M))|F} 2.6561 - 96 + 1 2.116 55461.1 1.0 1627 5030 6658 HBL1_DMSO_200M_050219_1,6659 HBL1_DMSO_200M_050219_1,6659,PHEIAPIE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6660 34.676 81.0 810890.0 25 0 98684.0 + 16467 KAISGVHTV 9 99 456.2689482239657 910.5233435147314 2 456.2688781619072 MULTI CID FTMS 0 0 0 6658 912089.875 0.1623958062922886 -4 0.1756210327148437 2 Unmodified _KAISGVHTV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 103.35351024395868 0.0092202910191236 3 KA{I|L}S[VG]HTV 9 0 + 60.301 0.0 0.0 6.6226 6.6226 90.746 0.0 0.0 0.0 17.762064119389493 14.277034080690356 14.277034080690356 10.150764806034331 0 2.110924374808178 0.0 2.110924374808178 0.0 + + KA{I|L}S[VG]HTV;RRSRHTV;{[TV]|[{I|L}S]}H[VG]AKTV;[KA]{I|L}[HD]KTV;[HT]V[VG]AKTV;{[TV]|[{I|L}S]}H[VG]TAKV;{[TV]|[{I|L}S]}H[VG]ATKV;[HT]AA{I|L}AKTV;{[TV]|[{I|L}S]}HRSRR;[KA]{I|L}[HD]TKV 6.6226;5.5078;4.6985;4.2091;3.7705;3.4687;3.3817;3.2465;3.0646;2.8923 +;-;-;-;-;-;-;-;-;- + 656 + 1 2.116 55616.0 1.0 1628 5030 6658 HBL1_DMSO_200M_050219_1,6660 HBL1_DMSO_200M_050219_1,6660,KAISGVHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6661 34.678 111.0 662440.0 25 0 40589.0 + 34723 SPYHSPKV 8 122 305.49603158095294 913.4662653430588 3 305.4956542849541 MULTI CID FTMS 0 0 0 6658 429321.5 0.944162657026119 2 -0.1084060668945312 3 Unmodified _SPYHSPKV_ ENSG00000198807|ENST00000361487|PAX9;ENST00000557107.1_1_14:37135665-37140295:+|nuORF 11.640296217721598 0.738950129755968 3 VS 2 7 19.464 0.0 0.0 2.1308 0.0 0.0 709.3556467965745 0.0 709.3556467965745 0.0 5.026975159433533 0.0 0.0 0 0.0 0.0 0.0 0.0 VS 2.1308 - 141 1 2.116 66426.3 1.0 1629 5030 6658 HBL1_DMSO_200M_050219_1,6661 HBL1_DMSO_200M_050219_1,6661,SPYHSPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6662 34.688 602.0 211250.0 25 0 14259.0 + 17907 KQTEIAKRL 9 149 362.8928402487448 1085.6566913464344 3 362.8924743533134 MULTI CID FTMS 0 0 0 6658 210338.4375 0.874471119020656 1 -0.0482368469238281 4 Unmodified _KQTEIAKRL_ ENSG00000140332|ENST00000451782|TLE3;ENSG00000196781|ENST00000376499|TLE1;nc|ENSG00000140332|Q04726-2|TLE3;nc|ENSG00000140332|Q04726-3|TLE3;nc|ENSG00000140332|Q04726-4|TLE3;nc|ENSG00000140332|Q04726-6|TLE3;nc|ENSG00000140332|Q04726-7|TLE3;nc|ENSG00000140332|Q04726|TLE3 36.506200033944 0.094635877243972 3 [KQ]TE{I|L}AKR{I|L} 9 0 + 46.82 0.0 0.0 4.3126 4.3126 74.654 0.0 0.0 0.0 3.0102999566398125 2.914846777577509 2.914846777577509 2.914846777577509 0 0.7059771852360797 0.0 0.0 0.2742275032520141 + + [KQ]TE{I|L}AKR{I|L};[KQ]TE{I|L}A{I|L}[RK];{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}AKR{I|L};{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}A{I|L}[RK];[KQ]TE{I|L}{I|L}A[RK];{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}{I|L}A[RK] 4.3126;4.0441;4.0353;3.7668;3.3273;3.05 +;-;-;-;-;- + 212 + 1 2.116 105627.1 1.0 1630 5030 6658 HBL1_DMSO_200M_050219_1,6662 HBL1_DMSO_200M_050219_1,6662,KQTEIAKRL True True KQTEIAKRL 34.688352 362.892474353313 1316793.25 6658.0 ENSG00000196781|ENST00000376499|TLE1;;nc|ENSG00000140332|Q04726-7|TLE3;;nc|ENSG00000140332|Q04726-6|TLE3;;nc|ENSG00000140332|Q04726-2|TLE3;;nc|ENSG00000140332|Q04726-4|TLE3;;nc|ENSG00000140332|Q04726-3|TLE3;;nc|ENSG00000140332|Q04726|TLE3;;ENSG00000140332|ENST00000451782|TLE3 3.6389833291371674 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6663 34.702 800.0 202090.0 25 0 22390.0 -1 0 108 696.9248425036976 3479.587830185488 5 697.5289184451103 MULTI CID FTMS 0 0 0 6658 199352.8125 1.0 0 0.0 5 3 HGW 3 -1 10.802 0.0 0.0 0.31044 0.0 0.0 1180.5336093141225 1915.8786734692687 3096.412282783392 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HGW 0.31044 - 60 + 1 2.116 119165.5 0.7200000286102295 1631 5030 6658 HBL1_DMSO_200M_050219_1,6663 HBL1_DMSO_200M_050219_1,6663, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6664 34.715 712.0 314250.0 25 0 16950.0 + 10677 FVSLYLPPA 9 267 336.19189972800126 0 336.1926147341728 PEAK CID FTMS 0 0 0 6658 78241.8046875 0.8265015064023026 1 -0.0482368469238281 6 Unmodified _FVSLYLPPA_ REV__ENST00000335464.9_1_17:72833969-72834278:+|nuORF 12.531546534597751 0.2832320739326029 3 S 1 -1 3.9794 0.0 0.0 0.59361 0.0 0.0 512.2633638097151 68.05135523013905 580.3147190398541 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.59361 + + 14 + 1 2.116 173760.5 1.0 1632 5030 6658 HBL1_DMSO_200M_050219_1,6664 HBL1_DMSO_200M_050219_1,6664,FVSLYLPPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6666 34.73 800.0 129920.0 25 0 10181.0 + -1 TEPFSCNTV 9 153 527.7304303984153 1053.4463078636304 2 527.7299682497978 MULTI CID FTMS 0 0 0 6665 79834.1640625 1.0 0 0.0 1 Carbamidomethyl (C) _TEPFSC(Carbamidomethyl (C))NTV_ REV__ENSG00000143178|ENST00000367821|TBX19 32.30548876998284 0.1201446275138228 3 {[DA]|[EG]}KVA 5 -1 42.082 0.0 0.0 3.9947 0.0 0.0 0.0 566.1579046252731 566.1579046252731 12.83687146528628 0.0 0.0 0.0 0 0.5994850021680094 1.5228787452803376 0.7302046884880937 0.0 {[DA]|[EG]}KVA 3.9947 - 602 1 2.116 87740.4 0.6100000143051147 1633 5031 6665 HBL1_DMSO_200M_050219_1,6666 HBL1_DMSO_200M_050219_1,6666,TEPFSCNTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6667 34.733 140.0 743840.0 25 0 226910.0 + 40213 RQVTGVTRV 9 76 508.3046566425296 1014.5947603518592 2 508.3040954470634 MULTI CID FTMS 0 0 0 6665 503729.0 0.4058535178341786 -3 0.1072578430175781 2 Unmodified _VGRIQSSLR_ ENSG00000196531|ENST00000454682|NACA;nc|ENSG00000196531|E9PAV3-2|NACA;nc|ENSG00000196531|Q13765|NACA 11.494710602746466 0.5255349189887087 3 VGQV 4 6 43.365 0.0 0.0 4.2741 0.0 0.0 0.0 628.3452852838499 628.3452852838499 28.672137691284405 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.0 0.4247425010840047 VGQV 4.2741 - 115 + 1 2.116 85504.6 1.0 1634 5031 6665 HBL1_DMSO_200M_050219_1,6667 HBL1_DMSO_200M_050219_1,6667,VGRIQSSLR False False RQVTGVTRV 34.733293 508.304095447063 5249142.0 6665.0 ENSG00000196531|ENST00000454682|NACA;;nc|ENSG00000196531|E9PAV3-2|NACA;;nc|ENSG00000196531|Q13765|NACA 0.1989710281292597 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6668 34.737 210.0 750250.0 25 0 120780.0 + 32306 RYAVRRSL 8 107 340.87364073722085 1019.5990928118626 3 340.8733398318291 MULTI CID FTMS 0 0 0 6665 339931.3125 0.6004087357694248 -2 0.0958328247070312 3 Unmodified _RYAVRRSL_ ENSG00000177981|ENST00000317697|ASB8 10.823927491677226 0.7510103885582552 3 {I|L}R 2 7 23.711 0.0 0.0 2.3256 0.0 0.0 0.0 747.3925007645717 747.3925007645717 11.237125054200234 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}R 2.3256 - 33 + 1 2.116 127960.7 1.0 1635 5031 6665 HBL1_DMSO_200M_050219_1,6668 HBL1_DMSO_200M_050219_1,6668,RYAVRRSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6669 34.74 111.0 545620.0 25 0 47634.0 + 18539 KYVNGSTY 8 84 466.2295826879229 930.4446124426458 2 466.2290832400322 MULTI CID FTMS 0 0 0 6665 312054.71875 0.627611746399313 -2 0.0958328247070312 4 Unmodified _KYVNGSTY_ ENSG00000174231|ENST00000304992|PRPF8 13.50788311687929 0.7113601687236069 3 TY 2 6 24.464 0.0 0.0 2.6293 0.0 0.0 648.3229647302426 0.0 648.3229647302426 0.0 13.62649471529184 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + TY 2.6293 + + 74 + 1 2.116 50977.2 1.0 1636 5031 6665 HBL1_DMSO_200M_050219_1,6669 HBL1_DMSO_200M_050219_1,6669,KYVNGSTY False True KYVNGSTY 34.739601 466.229083240032 2119211.0 6665.0 ENSG00000174231|ENST00000304992|PRPF8 1.6934064229329426 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6670 34.753 800.0 175110.0 25 0 103500.0 + 40250 VGSTKGGV 8 60 704.3935212501809 703.3862447835809 1 704.3937866091728 MULTI CID FTMS 0 0 0 6665 237484.078125 1.0 0 0.0 5 Unmodified _VGSTKGGV_ REV__ENSG00000132849|ENST00000642238|PATJ;REV__ENST00000459752.5_1_1:62228564-62579919:+|nuORF;REV__ENST00000484562.5_1_1:62228564-62579919:+|nuORF;REV__nc|ENSG00000132849|Q8NI35-2|PATJ;REV__nc|ENSG00000132849|Q8NI35-3|PATJ;REV__nc|ENSG00000132849|Q8NI35-4|PATJ;REV__nc|ENSG00000132849|Q8NI35|PATJ 11.640296217721598 0.738950129755968 3 V{M(Oxidation (M))|F}[QT]{I|L}P 6 -1 + 28.46 0.0 0.0 4.0462 4.0462 77.428 0.0 0.0 0.0 16.197887582883936 5.383643918355361 5.383643918355361 5.383643918355361 0 0.0 0.0 0.4247425010840047 0.4247425010840047 V{M(Oxidation (M))|F}[QT]{I|L}P;{[MG]|[TS]}[R{I|L}]EV 4.0462;3.2808 -;- 48 + 1 2.116 103588.5 0.8700000047683716 1637 5031 6665 HBL1_DMSO_200M_050219_1,6670 HBL1_DMSO_200M_050219_1,6670,VGSTKGGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6671 34.767 800.0 130340.0 25 0 13245.0 + 35512 STMSTNGIPR 10 131 540.2607356747474 1078.5069184162946 2 540.2609130740166 MULTI CID FTMS 0 0 0 6665 130821.2734375 0.9946037574066104 -4 0.1881065368652343 6 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 45.739877483867886 0.1051543674217965 3 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 48.497 0.0 0.0 4.4967 4.4967 77.799 0.0 0.0 0.0 5.764837301042718 4.559319556497243 4.559319556497243 4.559319556497243 0 0.7302046884880937 0.0 0.4247425010840047 0.3494850021680094 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STNVVQP;{[MG]|[TS]}{M(Oxidation (M))|F}STN[KT]PP;{[MG]|[TS]}{M(Oxidation (M))|F}STRRQP;[VG]SVVNTS[WM];AATVVNTS[WM];{[MG]|[TS]}{M(Oxidation (M))|F}STNVVPQ 4.4967;4.0739;3.6469;3.2242;2.612;2.4639;2.4487;2.1147;2.063;1.8627 -;+;-;-;-;-;-;-;-;- + 454 + 1 2.116 84311.8 0.7099999785423279 1638 5031 6665 HBL1_DMSO_200M_050219_1,6671 HBL1_DMSO_200M_050219_1,6671,STMSTNGIPR True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6672 34.775 414.0 315960.0 25 0 21175.0 -1 CRHVLGVMI 9 177 362.1961795789083 1083.566709336925 3 362.1961242556572 MULTI CID FTMS 0 0 0 6665 131549.28125 0.5496035374001337 -2 0.0958328247070312 7 Carbamidomethyl (C) _C(Carbamidomethyl (C))RHVLGVMI_ ENST00000292852.8_1_19:39432516-39432606:-|nuORF 9.38312468134398 0.5871240394367778 3 T{I|L}{M(Oxidation (M))|F}{I|L}NP 6 -1 20.763 0.0 0.0 1.9161 0.0 0.0 380.1999378888688 0.0 380.1999378888688 0.0 9.34276059950351 0.0 0.0 0 0.0356668758921828 0.0 0.0 0.0 T{I|L}{M(Oxidation (M))|F}{I|L}NP 1.9161 - 544 1 2.116 106774.1 1.0 1639 5031 6665 HBL1_DMSO_200M_050219_1,6672 HBL1_DMSO_200M_050219_1,6672,CRHVLGVMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6674 34.782 247.0 239220.0 25 0 32536.0 -1 VMEKDMVVDVD 11 79 437.863576720333 1310.568900761199 3 437.8631774783134 MULTI CID FTMS 0 0 0 6673 198418.484375 0.5523114273747427 -16 0.4762992858886719 1 2 Oxidation (M) _VM(Oxidation (M))EKDM(Oxidation (M))VVDVD_ nc|ENSG00000055118|Q12809-4|KCNH2 2.6312355333042263 0.8627335947654684 3 MP 2 -1 12.429 0.0 0.0 0.94837 0.0 0.0 1064.46483384401 0.0 1064.46483384401 0.0 2.4289891313923206 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 MP 0.94837 - 12 + 1 2.113 51697.8 1.0 1640 5032 6673 HBL1_DMSO_200M_050219_1,6674 HBL1_DMSO_200M_050219_1,6674,VMEKDMVVDVD False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6675 34.796 800.0 121210.0 25 0 8094.3 + 3834 DAITPKREV 9 129 514.7902758133847 1027.565998693569 2 514.7902099490166 MULTI CID FTMS 0 0 0 6673 55443.6640625 0.2060442588213488 3 -0.0898895263671875 2 Unmodified _DAITPKREV_ ENSG00000143748|ENST00000281701|NVL;nc|ENSG00000143748|O15381-2|NVL;nc|ENSG00000143748|O15381-3|NVL;nc|ENSG00000143748|O15381-4|NVL;nc|ENSG00000143748|O15381-5|NVL 32.037481411007896 0.1235546156350648 3 {[DA]|[EG]}{I|L}TN 5 5 53.116 0.0 0.0 5.1691 0.0 0.0 0.0 510.30199657858816 510.30199657858816 23.48829211111953 0.0 0.0 0.0 0 1.5 1.3010299956639813 0.2887254899964357 0.0 {[DA]|[EG]}{I|L}TN 5.1691 - 1533 1 2.113 76612.6 0.7400000095367432 1641 5032 6673 HBL1_DMSO_200M_050219_1,6675 HBL1_DMSO_200M_050219_1,6675,DAITPKREV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6677 34.801 11.0 5060100.0 25 0 1034000.0 + 14767 ILDKKVEKV 9 87 357.89739830097307 1070.6703655031192 3 357.8971435427666 MULTI CID FTMS 0 0 0 6676 4999062.0 0.3357568331276325 3 -0.0770988464355468 1 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 31.635753872319068 0.1286659907112723 3 {I|L}{I|L}DKKVEKV 9 0 + 79.835 0.0 0.0 7.4566 7.4566 93.626 0.0 0.0 0.0 39.011007396375135 11.082268588648247 11.082268588648247 12.231975075880328 0 0.5994850021680094 2.0 0.3252574989159953 0.4247425010840047 + + {I|L}{I|L}DKKVEKV;{I|L}{I|L}V[SG]KVEKV;{I|L}{I|L}DVKKEKV;{I|L}{I|L}VDKKEKV;{I|L}VEKKVEKV;{I|L}V{I|L}[SG]KVEKV;{I|L}VEVKKEKV;{I|L}V{I|L}DKKEKV 7.4566;6.3141;6.2902;6.0078;4.981;3.8386;3.8147;3.5322 +;-;-;-;-;-;-;- + 337 + 1 2.113 52123.0 1.0 1642 5033 6676 HBL1_DMSO_200M_050219_1,6677 HBL1_DMSO_200M_050219_1,6677,ILDKKVEKV False True ILDKKVEKV 34.800576 357.897143542767 222727308.0 6676.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 6.18425989151001 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6678 34.804 156.0 487540.0 25 0 34196.0 + 24774 MPHPATGKTV 10 95 519.7736593458334 1037.532765758467 2 519.7739135622978 MULTI CID FTMS 0 0 0 6676 375966.34375 0.4755448760946871 3 -0.0770988464355468 2 Unmodified _MPHPATGKTV_ ENSG00000070814|ENST00000643257|TCOF1;ENST00000515035.5_1_5:149748314-149754605:+|nuORF;nc|ENSG00000070814|Q13428-2|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;nc|ENSG00000070814|Q13428-5|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428|TCOF1 34.93206674587334 0.2110832994570416 3 {NN|[MP]|[D{I|L}]|[EV]}HV{[QV]|[N{I|L}]|[RA]|[KV]}QTV 9 4 + 60.255 0.0 0.0 5.8076 5.8076 86.259 0.0 0.0 0.0 31.782404735002068 19.34230765183312 19.34230765183312 9.075221787320515 0 1.1861818737241734 1.3979400086720375 1.309894379144197 0.0 {NN|[MP]|[D{I|L}]|[EV]}HV{[QV]|[N{I|L}]|[RA]|[KV]}QTV;{NN|[MP]|[D{I|L}]|[EV]}HP[KT]QTV;{NN|[MP]|[D{I|L}]|[EV]}HV{[QV]|[N{I|L}]|[RA]|[KV]}[AG]TV;{NN|[MP]|[D{I|L}]|[EV]}HP[KT][AG]TV;{NN|[MP]|[D{I|L}]|[EV]}HP[TA][KG]TV;{NN|[MP]|[D{I|L}]|[EV]}HV{I|L}{I|L}DDV;[YT]TV{[QV]|[N{I|L}]|[RA]|[KV]}QTV;{NN|[MP]|[D{I|L}]|[EV]}H{I|L}{I|L}{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}H{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}[YK][TA]QTV 5.8076;4.9329;4.9201;4.0454;3.6097;3.3003;3.1761;3.0807;2.9835;2.8405 -;-;-;-;+;-;-;-;-;- + 299 + 1 2.113 61412.0 1.0 1643 5033 6676 HBL1_DMSO_200M_050219_1,6678 HBL1_DMSO_200M_050219_1,6678,MPHPATGKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6679 34.81 325.0 298760.0 25 0 40780.0 + 36425 SYYDSHRQSV 10 81 621.2812310629319 1240.5479091926636 2 621.2811767458916 MULTI CID FTMS 0 0 0 6676 304907.65625 0.7487185055472595 -2 0.0816726684570312 3 Unmodified _SYYDSHRQSV_ ENSG00000155561|ENST00000285968|NUP205;ENST00000477620.5_1_7:135320372-135330929:+|nuORF 51.487983226225225 0.0714176344394665 3 SYYDSH 6 4 76.191 0.0 0.0 6.1417 0.0 0.0 0.0 485.24823938541255 485.24823938541255 51.15356566548286 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.805462187404089 0.0 + SYYDSH 6.1417 + + 274 + 1 2.113 77620.3 1.0 1644 5033 6676 HBL1_DMSO_200M_050219_1,6679 HBL1_DMSO_200M_050219_1,6679,SYYDSHRQSV True True SYYDSHRQSV 34.809597 621.281176745892 1547080.125 6676.0 ENST00000477620.5_1_7:135320372-135330929:+|nuORF;;ENSG00000155561|ENST00000285968|NUP205 8.910013675689697 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6680 34.812 134.0 341680.0 25 0 18401.0 + 24288 MARTPQTV 8 86 452.2399458508569 902.4653387685138 2 452.2404357790947 MULTI CID FTMS 0 0 0 6676 234962.4375 0.9066638143993996 -3 0.1299095153808593 4 Unmodified _MARTPQTV_ ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1 15.847184025352805 0.6768015514314958 3 TV 2 6 18.8 0.0 0.0 2.0832 0.0 0.0 684.3380327155826 0.0 684.3380327155826 0.0 7.562893943202624 0.0 0.0 0 0.5 0.0 0.1861818737241735 0.0 + TV 2.0832 + + 100 + 1 2.113 41229.2 1.0 1645 5033 6676 HBL1_DMSO_200M_050219_1,6680 HBL1_DMSO_200M_050219_1,6680,MARTPQTV False True MARTPQTV 34.812326 452.240435779095 1560183.875 6676.0 ENSG00000001630|ENST00000003100|CYP51A1;;nc|ENSG00000001630|Q16850-2|CYP51A1;;ENST00000419457.1_1_13:29296686-29297403:-|nuORF 3.8672971725463863 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6682 34.822 422.0 221790.0 25 0 16305.0 -1 MWRIRRRYCQV 11 100 547.2869853485538 1638.8391266458611 3 547.6251098513603 MULTI CID FTMS 0 0 0 6681 159051.3125 0.9992286354700856 1 -0.0521736145019531 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))WRIRRRYC(Carbamidomethyl (C))QV_ ENSG00000173389|ENST00000310914|IQCF1 0.4545168274142398 0.8730034954726786 3 {I|L}NK 3 -1 27.664 0.0 0.0 1.688 0.0 0.0 1265.6066265011332 0.0 1265.6066265011332 0.0 14.01863755803667 0.0 0.0 0 0.0 0.0 0.0 0.6237125054200234 {I|L}NK 1.688 - 382 + 1 2.113 76576.3 1.0 1646 5034 6681 HBL1_DMSO_200M_050219_1,6682 HBL1_DMSO_200M_050219_1,6682,MWRIRRRYCQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6683 34.824 93.0 826300.0 25 0 89719.0 17696 KPTGVRTNVP 10 73 534.8118963385699 1067.6092397439395 2 534.8116943240166 MULTI CID FTMS 0 0 0 6681 822686.6875 0.7126420981486121 -1 0.0162124633789062 2 Unmodified _KPTGVRTNVP_ ENSG00000165458|ENST00000298229|INPPL1;nc|ENSG00000165458|O15357-2|INPPL1 17.44264345198275 0.5548713957087773 3 KPTGAP 6 5 61.146 0.0 0.0 5.7274 0.0 0.0 0.0 513.2679537408811 513.2679537408811 49.88732793471588 0.0 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 KPTGAP 5.7274 - 44 + 1 2.113 65526.2 1.0 1647 5034 6681 HBL1_DMSO_200M_050219_1,6683 HBL1_DMSO_200M_050219_1,6683,KPTGVRTNVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6684 34.826 99.0 900500.0 25 0 237180.0 + 16471 KAISGVHTV 9 102 304.5154422679609 910.5244974040828 3 304.5150329470634 MULTI CID FTMS 0 0 0 6681 458260.6875 1.0 0 0.0 3 Unmodified _KAISGVHTV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 20.453626601364224 0.2830276176381075 3 [HT]VGVSRR 8 7 + 17.625 0.0 0.0 1.9356 1.9356 66.611 0.0 0.0 0.0 0.6694678963061307 5.406075122407689 0.6694678963061307 0.6694678963061307 0 0.0 0.0 0.0 0.0 [HT]VGVSRR;[HV]TGVSRR;[HT]VVGSRR;[HV]TVGSRR;[HT]VGSVRR;[HT]VRSRR;[HV]TGSVRR;[HV]TRSRR;[HV]GTVSRR;[HV]GTSVRR 1.9356;1.8621;1.7423;1.6687;1.6099;1.5623;1.5364;1.4888;1.4446;1.1188 -;-;-;-;-;-;-;-;-;- 251 1 2.113 77112.6 1.0 1648 5034 6681 HBL1_DMSO_200M_050219_1,6684 HBL1_DMSO_200M_050219_1,6684,KAISGVHTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6685 34.84 800.0 200740.0 25 0 48396.0 -1 0 93 851.3702585013517 1700.725964069503 2 851.3704711794853 MULTI CID FTMS 0 0 0 6681 204129.203125 1.0 0 0.0 4 3 [{I|L}T]PMP[{I|L}T]{M(Oxidation (M))|F} 8 -1 27.778 0.0 0.0 1.6333 0.0 0.0 0.0 797.2777578529596 797.2777578529596 16.66895006820745 0.0 0.0 0.0 0 0.0 0.0 1.174742501084005 0.0 [{I|L}T]PMP[{I|L}T]{M(Oxidation (M))|F} 1.6333 - 154 1 2.113 112149.6 0.7099999785423279 1649 5034 6681 HBL1_DMSO_200M_050219_1,6685 HBL1_DMSO_200M_050219_1,6685, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6686 34.851 609.0 310530.0 25 0 46499.0 + -1 PLVYFMYM 8 192 360.5037212807909 1078.4893344425727 3 360.5035583376884 MULTI CID FTMS 0 0 0 6681 138930.859375 0.7407815485590435 -2 0.0377159118652343 5 Oxidation (M) _PLVYFM(Oxidation (M))YM_ REV__ENSG00000213996|ENST00000389363|TM6SF2;REV__nc|ENSG00000213996|Q9BZW4-2|TM6SF2 7.910154910731844 0.7763180056447161 3 {I|L}PSSAA 6 -1 52.855 0.0 0.0 4.9008 0.0 0.0 0.0 549.1936129205686 549.1936129205686 35.23509716672216 0.0 0.0 0.0 0 0.25 1.2218487496163564 0.0 0.0 {I|L}PSSAA 4.9008 - 433 + 1 2.113 160343.9 1.0 1650 5034 6681 HBL1_DMSO_200M_050219_1,6686 HBL1_DMSO_200M_050219_1,6686,PLVYFMYM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6687 34.865 800.0 104750.0 25 0 6761.3 + -1 RYIGKTMDY 9 106 581.7812441177917 1161.5479353023834 2 581.7822753787041 MULTI CID FTMS 0 0 0 6681 135730.75 0.6078924135351942 2 -0.0608863830566406 6 Oxidation (M) _RYIGKTM(Oxidation (M))DY_ ENSG00000143314|ENST00000361531|MRPL24;ENST00000478899.1_1_1:156707192-156707995:-|nuORF 27.628801355627647 0.1796483985696185 3 [YR]{I|L}GKT{M(Oxidation (M))|F}DY 9 -1 + 36.533 0.0 0.0 3.1452 3.1452 78.055 0.0 0.0 0.0 3.1234684152075047 23.34507800221289 3.1234684152075047 8.750612633917005 0 0.8182503180159344 0.0 0.4247425010840047 0.0 [YR]{I|L}GKT{M(Oxidation (M))|F}DY;[{M(Oxidation (M))|F}T][K{I|L}]KT{M(Oxidation (M))|F}DY;[TP][YK]KT{M(Oxidation (M))|F}DY;[{M(Oxidation (M))|F}T][K{I|L}]K[EC]MY 3.1452;2.3918;1.9234;1.4282 +;-;-;- + 197 1 2.113 69611.9 0.6899999976158142 1651 5034 6681 HBL1_DMSO_200M_050219_1,6687 HBL1_DMSO_200M_050219_1,6687,RYIGKTMDY False False RYIGKTMDY 34.864542 581.782275378704 1238323.375 6681.0 ENSG00000143314|ENST00000361531|MRPL24;;ENST00000478899.1_1_1:156707192-156707995:-|nuORF 6.9063483874003095 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6689 34.869 45.0 1354100.0 25 0 160950.0 + 21189 LPDATSSHRTV 11 72 592.307062569692 1182.599572206184 2 592.3071166872978 MULTI CID FTMS 0 0 0 6688 1414676.0 0.9580409771445584 -2 0.0683860778808593 1 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 46.340004068617176 0.1378990705405701 3 {I|L}PDATSSH 8 3 93.653 0.0 0.0 7.9192 0.0 0.0 0.0 371.2041720026001 371.2041720026001 69.21572252127653 0.0 0.0 0.0 0 1.1549471895720984 1.6989700043360187 1.274227503252014 0.0 + {I|L}PDATSSH 7.9192 + + 199 + 1 2.113 55606.5 1.0 1652 5035 6688 HBL1_DMSO_200M_050219_1,6689 HBL1_DMSO_200M_050219_1,6689,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6690 34.873 229.0 266020.0 25 0 26742.0 + 15457 IPQFQPVGA 9 100 478.76185843639854 955.5091639395972 2 478.7619201540947 MULTI CID FTMS 0 0 0 6688 197387.125 0.1817166531298569 4 -0.1600074768066406 2 Unmodified _IPQFQPVGA_ REV__ENSG00000171587|ENST00000400454|DSCAM;REV__nc|ENSG00000171587|O60469-2|DSCAM 36.04419817259434 0.0971720506436186 3 {I|L}PQE 4 -1 54.271 0.0 0.0 5.6798 0.0 0.0 0.0 485.2484224908813 485.2484224908813 35.687587626244124 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.7742275032520141 {I|L}PQE 5.6798 - 220 + 1 2.113 50412.3 1.0 1653 5035 6688 HBL1_DMSO_200M_050219_1,6690 HBL1_DMSO_200M_050219_1,6690,IPQFQPVGA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6692 34.878 7.2 6385000.0 25 0 711200.0 + 21184 LPDATSSHRTV 11 62 395.2070921144592 1182.5994469435775 3 395.2069579958916 MULTI CID FTMS 0 0 0 6691 7713275.0 0.9782321617392712 -1 0.0087127685546875 1 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 21.66607237732072 0.5834766605609453 3 {I|L}PDATSSH 8 3 76.095 0.0 0.0 6.4345 0.0 0.0 0.0 371.2052096002563 371.2052096002563 42.99085977895906 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.8494850021680094 0.0 + {I|L}PDATSSH 6.4345 + + 138 + 1 2.113 46207.1 1.0 1654 5036 6691 HBL1_DMSO_200M_050219_1,6692 HBL1_DMSO_200M_050219_1,6692,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6693 34.879 36.0 1323000.0 25 0 104430.0 -1 ESATITCLV 9 84 497.24975653669526 992.4849601401904 2 497.2498046755791 MULTI CID FTMS 0 0 0 6691 1630097.75 0.8267584617838603 3 -0.1512947082519531 2 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 42.09456458481378 0.0639583784996157 3 [TA]DTP{I|L}T{M(Oxidation (M))|F}K 9 -1 [TA]D + + 38.708 16.839 5.8651 3.9001 3.9001 52.249 0.0 0.0 0.0 0.0 21.8688839548397 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.2134679910804404 [TA]DTP{I|L}T{M(Oxidation (M))|F}K 3.9001 - 72 + 1 2.113 44077.9 1.0 1655 5036 6691 HBL1_DMSO_200M_050219_1,6693 HBL1_DMSO_200M_050219_1,6693,ESATITCLV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6694 34.88 27.0 2590700.0 25 0 379680.0 + 17665 KPTGARPSAL 10 67 499.2931313303457 996.5717097274916 2 499.2930175662041 MULTI CID FTMS 0 0 0 6691 2438835.0 0.7885011362345877 11 -0.7167091369628906 3 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 23.78978130925829 0.4341852049148378 3 KPTG 4 6 45.433 0.0 0.0 4.5589 0.0 0.0 0.0 610.3317965143186 610.3317965143186 32.66884043855232 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPTG 4.5589 + + 31 + 1 2.113 59092.8 1.0 1656 5036 6691 HBL1_DMSO_200M_050219_1,6694 HBL1_DMSO_200M_050219_1,6694,KPTGARPSAL False True KPTGARPSAL 34.880029 499.293017566204 6348139520.0 6691.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 6.427922089894612 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6695 34.882 81.0 999280.0 25 0 143150.0 20993 LNREGPKAL 9 95 333.1979866606353 996.572130582106 3 333.1976501345634 MULTI CID FTMS 0 0 0 6691 853455.8125 0.6792560209493881 11 -0.7167091369628906 4 Unmodified _LNREGPKAL_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 27.628801355627647 0.1796483985696185 3 [KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GTPK{I|L} 9 5 + 35.384 0.0 0.0 3.5506 3.5506 72.244 0.0 0.0 0.0 2.579700210466598 13.84643433451714 2.579700210466598 2.579700210466598 0 0.3807196863200844 0.0 0.3252574989159953 0.3252574989159953 [KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GTPK{I|L};[TP][KG]QTPR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SPKA{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SAPK{I|L};[KP]{[SA]|[TG]}QTPR{I|L};[KP][WQ]TPK{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SPAK{I|L};[TP][KG]WPKA{I|L};[TP][KG]WAPK{I|L};[KP]{[SA]|[TG]}WPKA{I|L} 3.5506;3.2917;3.2855;3.1513;3.0475;2.9005;2.8492;2.7489;2.6147;2.5047 -;-;-;-;-;-;-;-;-;- 640 1 2.113 73649.3 1.0 1657 5036 6691 HBL1_DMSO_200M_050219_1,6695 HBL1_DMSO_200M_050219_1,6695,LNREGPKAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6696 34.885 173.0 476350.0 25 0 32475.0 35458 STLKGAGA 8 118 352.70080005713606 703.3870471810721 2 352.7003051638603 MULTI CID FTMS 0 0 0 6691 472104.65625 0.2068604638934887 5 -0.2714653015136719 5 Unmodified _STLKGAGA_ ENST00000335154.9_1_12:50036614-50037331:-|nuORF 23.1484247019978 0.5573009939494978 3 ST{I|L}{[RE]|[WV]}V 6 5 + 48.491 0.0 0.0 6.8939 6.8939 86.704 0.0 0.0 0.0 31.501378994909143 2.4826973394524643 2.4826973394524643 5.5102999566398125 0 0.3807196863200844 1.5228787452803376 0.0 0.25 ST{I|L}{[RE]|[WV]}V;STV[W{I|L}]V;STV[KQ]AA 6.8939;6.1105;3.5574 -;-;- 90 + 1 2.113 68260.4 1.0 1658 5036 6691 HBL1_DMSO_200M_050219_1,6696 HBL1_DMSO_200M_050219_1,6696,STLKGAGA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6697 34.888 116.0 530120.0 25 0 59776.0 + 39289 VADPETRTV 9 71 494.2590889676336 986.5036250020672 2 494.2588989138603 MULTI CID FTMS 0 0 0 6691 390509.4375 0.043217968401733 -5 0.1587715148925781 6 Unmodified _VADPETRTV_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 28.49450938151212 0.1686335738423394 3 VADPET 6 3 70.878 0.0 0.0 7.1848 0.0 0.0 0.0 371.20441614322505 371.20441614322505 63.88866283220501 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.4247425010840047 0.0 + VADPET 7.1848 + + 73 + 1 2.113 52817.3 1.0 1659 5036 6691 HBL1_DMSO_200M_050219_1,6697 HBL1_DMSO_200M_050219_1,6697,VADPETRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6698 34.894 356.0 324170.0 25 0 36280.0 + 4213 DAPKDYRQV 9 155 364.5208430808685 1090.5406998428057 3 364.5205871462822 MULTI CID FTMS 0 0 0 6691 203480.5 0.7094724852036512 8 -0.5809974670410156 7 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 22.736283301280096 0.2418982879461534 3 {[DA]|[EG]}PKD 5 4 50.273 0.0 0.0 4.6099 0.0 0.0 0.0 561.2790930708765 561.2790930708765 38.853126088378446 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + {[DA]|[EG]}PKD 4.6099 + + 125 + 1 2.113 97774.6 1.0 1660 5036 6691 HBL1_DMSO_200M_050219_1,6698 HBL1_DMSO_200M_050219_1,6698,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6699 34.908 800.0 117320.0 25 0 5822.5 + -1 NAVQMRYMLA 10 118 614.7946434999618 1227.5747340667235 2 614.7939941287041 MULTI CID FTMS 0 0 0 6691 99205.0078125 0.6428165074657027 1 -0.0484657287597656 8 2 Oxidation (M) _NAVQM(Oxidation (M))RYM(Oxidation (M))LA_ REV__ENSG00000197912|ENST00000645818|SPG7;REV__ENST00000564047.1_1_16:89590622-89596095:+|nuORF;REV__nc|ENSG00000197912|Q9UQ90-2|SPG7 19.256988751693697 0.5244284437930726 3 [VG]QAGA{I|L}[C(Carbamidomethyl (C))D][PG]A{I|L} 13 -1 + 60.029 0.0 0.0 4.8901 4.8901 72.526 0.0 0.0 0.0 0.4139268515822536 9.58616630665805 0.4139268515822536 0.4139268515822536 0 1.0172203223519531 1.3979400086720375 0.7614393726401688 1.6549471895720984 [VG]QAGA{I|L}[C(Carbamidomethyl (C))D][PG]A{I|L};[AG]GVQA{I|L}[C(Carbamidomethyl (C))D][PG]A{I|L};[VG]QQA{I|L}[C(Carbamidomethyl (C))D][PG]A{I|L};[AG]QVGA{I|L}[C(Carbamidomethyl (C))D][PG]A{I|L};[AG]QGVA{I|L}[C(Carbamidomethyl (C))D][PG]A{I|L};[QA]GVGA{I|L}[C(Carbamidomethyl (C))D][PG]A{I|L};[QA]GGVA{I|L}[C(Carbamidomethyl (C))D][PG]A{I|L};[AG]GQVA{I|L}[C(Carbamidomethyl (C))D][PG]A{I|L};[QA]NVA{I|L}[C(Carbamidomethyl (C))D][PG]A{I|L};[AG]GVAQ{I|L}[C(Carbamidomethyl (C))D][PG]A{I|L} 4.8901;4.8564;4.8395;4.5337;4.5233;4.4885;4.478;4.3555;4.2596;4.1171 -;-;-;-;-;-;-;-;-;- 3214 1 2.113 74273.7 0.5799999833106995 1661 5036 6691 HBL1_DMSO_200M_050219_1,6699 HBL1_DMSO_200M_050219_1,6699,NAVQMRYMLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6700 34.922 800.0 262250.0 25 0 29173.0 + 45856 YYQGGGGRY 9 172 510.7297116914261 0 510.7295104861259 PEAK CID FTMS 0 0 0 6691 95859.546875 0.356973676278813 -2 0.0608863830566406 9 Unmodified _YYQGGGGRY_ ENSG00000029363|ENST00000531224|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-4|BCLAF1 46.020951573049366 0.0425517664003206 3 YQNVHD 6 7 40.282 0.0 0.0 3.9513 0.0 0.0 163.06064660633314 97.04129968814686 260.10194629448 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.6643943297944485 0.6861818737241735 YQNVHD 3.9513 - 440 + 1 2.113 160474.3 0.5899999737739563 1662 5036 6691 HBL1_DMSO_200M_050219_1,6700 HBL1_DMSO_200M_050219_1,6700,YYQGGGGRY True True YYQGGGGRY 34.921713 510.729510486126 997785.6875 6691.0 nc|ENSG00000029363|Q9NYF8-2|BCLAF1;;nc|ENSG00000029363|Q9NYF8-4|BCLAF1;;ENSG00000029363|ENST00000531224|BCLAF1;;nc|ENSG00000029363|Q9NYF8-3|BCLAF1 7.1681563059488935 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6702 34.927 132.0 439060.0 25 0 75233.0 + 34787 SQDPGTHVV 9 86 470.23010219428033 938.4456514553608 2 470.2301208376884 MULTI CID FTMS 0 0 0 6701 414114.5625 0.0157021369739371 30 -1.4410400390625 1 Unmodified _SQDPGTHVV_ ENSG00000130935|ENST00000253247|NOL11 25.399314129420983 0.2080152500878129 3 {[QS]|[NT]}D 3 6 31.399 0.0 0.0 3.3459 0.0 0.0 0.0 605.30533708452 605.30533708452 17.904601657931902 0.0 0.0 0.0 0 1.0 0.0 0.2887254899964357 0.805462187404089 + {[QS]|[NT]}D 3.3459 + + 72 1 2.113 50088.8 1.0 1663 5037 6701 HBL1_DMSO_200M_050219_1,6702 HBL1_DMSO_200M_050219_1,6702,SQDPGTHVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6703 34.928 58.0 1189600.0 25 0 189070.0 44919 YPPPLPQR 8 98 323.1837477176532 966.5294137531596 3 323.1833679080009 MULTI CID FTMS 0 0 0 6701 555233.25 0.7772881519652929 -2 0.0571784973144531 2 Unmodified _YPPPLPQR_ ENSG00000139722|ENST00000267202|VPS37B 8.593279151180031 0.7721714526254883 3 YPPV 4 5 38.136 0.0 0.0 3.9457 0.0 0.0 0.0 507.2677401178344 507.2677401178344 27.02684409496328 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 YPPV 3.9457 - 88 + 1 2.113 61118.3 1.0 1664 5037 6701 HBL1_DMSO_200M_050219_1,6703 HBL1_DMSO_200M_050219_1,6703,YPPPLPQR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6704 34.929 58.0 1410900.0 25 0 147510.0 + 45575 YVEDGKGIRRV 11 65 431.2419338096302 1290.703972029091 3 431.2421752810478 MULTI CID FTMS 0 0 0 6701 731191.0625 1.0 0 0.0 3 Unmodified _YVEDGKGIRRV_ ENSG00000126391|ENST00000317568|FRMD8;ENST00000440433.1_1_X:64770780-64771062:-|nuORF;nc|ENSG00000126391|Q9BZ67-2|FRMD8;nc|ENSG00000126391|Q9BZ67-3|FRMD8 11.631370582801994 0.793200706552726 3 YVEDV 5 6 63.003 0.0 0.0 4.8813 0.0 0.0 0.0 682.4115373801126 682.4115373801126 51.01342204748164 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 YVEDV 4.8813 - 29 + 1 2.113 70341.5 1.0 1665 5037 6701 HBL1_DMSO_200M_050219_1,6704 HBL1_DMSO_200M_050219_1,6704,YVEDGKGIRRV False True YVEDGKGIRRV 34.929477 431.242175281048 2932125.5 6701.0 nc|ENSG00000126391|Q9BZ67-3|FRMD8;;ENSG00000126391|ENST00000317568|FRMD8;;nc|ENSG00000126391|Q9BZ67-2|FRMD8;;ENST00000440433.1_1_X:64770780-64771062:-|nuORF 4.386472543080648 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6705 34.932 102.0 889880.0 25 0 109300.0 + 12937 HAFHQPHV 8 106 324.83124865722266 971.471916571868 3 324.8313476443291 MULTI CID FTMS 0 0 0 6701 580459.75 0.5004128368888026 -3 0.1093521118164062 4 Unmodified _HAFHQPHV_ ENSG00000156127|ENST00000286639|BATF;ENST00000555795.1_1_14:75988823-76013011:+|nuORF 38.99230528602208 0.2511498934509823 3 [HA]{M(Oxidation (M))|F}GP 5 4 24.252 0.0 0.0 2.4964 0.0 0.0 0.0 459.1987311128457 459.1987311128457 8.361431973613305 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.0 0.0 [HA]{M(Oxidation (M))|F}GP 2.4964 - 147 1 2.113 80112.6 1.0 1666 5037 6701 HBL1_DMSO_200M_050219_1,6705 HBL1_DMSO_200M_050219_1,6705,HAFHQPHV False True HAFHQPHV 34.931667 324.831347644329 8937546.0 6701.0 ENST00000555795.1_1_14:75988823-76013011:+|nuORF;;ENSG00000156127|ENST00000286639|BATF 9.863809744517008 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6706 34.934 93.0 549230.0 25 0 53734.0 -1 KMIMKTSV 8 81 485.25872192531614 968.5028909174324 2 485.2588073611259 MULTI CID FTMS 0 0 0 6701 409158.71875 1.0 0 0.0 5 2 Oxidation (M) _KM(Oxidation (M))IM(Oxidation (M))KTSV_ ENSG00000105426|ENST00000262963|PTPRS;ENST00000588552.5_1_19:5159112-5286160:-|nuORF;nc|ENSG00000105426|Q13332-2|PTPRS;nc|ENSG00000105426|Q13332-3|PTPRS;nc|ENSG00000105426|Q13332-4|PTPRS;nc|ENSG00000105426|Q13332-5|PTPRS;nc|ENSG00000105426|Q13332-6|PTPRS;nc|ENSG00000105426|Q13332-7|PTPRS 26.88365393820708 0.4786498634179528 3 TSV 3 -1 37.193 0.0 0.0 3.8402 0.0 0.0 663.3463612287125 0.0 663.3463612287125 0.0 24.23848138650448 0.0 0.0 0 1.0994850021680094 0.0 0.0 0.0 TSV 3.8402 + + 91 1 2.113 44945.8 1.0 1667 5037 6701 HBL1_DMSO_200M_050219_1,6706 HBL1_DMSO_200M_050219_1,6706,KMIMKTSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6707 34.939 262.0 481600.0 25 0 138960.0 36996 TFLRQALEA 9 118 350.19646289428414 0 350.1963989138603 PEAK CID FTMS 0 0 0 6701 286782.4375 0.7076371755577564 1 -0.0461463928222656 6 Unmodified _TFLRQALEA_ ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11 10.073929032068715 0.3114232490637051 3 E 1 8 8.4113 0.0 0.0 1.2044 0.0 0.0 349.18978965418523 217.12354456119377 566.313334215379 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + E 1.2044 + + 4 + 1 2.113 105913.5 1.0 1668 5037 6701 HBL1_DMSO_200M_050219_1,6707 HBL1_DMSO_200M_050219_1,6707,TFLRQALEA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6708 34.945 354.0 216940.0 25 0 18650.0 4216 DAPKDYRQV 9 91 546.276318452949 1090.538083972698 2 546.2760497927666 MULTI CID FTMS 0 0 0 6701 226463.265625 1.0 0 0.0 7 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 15.248480904072842 0.4239247793462406 3 DA[KP]D 5 4 40.616 0.0 0.0 3.7244 0.0 0.0 0.0 561.2791835893618 561.2791835893618 11.338031200885156 0.0 0.0 0.0 0 0.5554621874040891 1.5228787452803376 0.0 0.0 + DA[KP]D 3.7244 + + 132 + 1 2.113 64866.9 1.0 1669 5037 6701 HBL1_DMSO_200M_050219_1,6708 HBL1_DMSO_200M_050219_1,6708,DAPKDYRQV False True GGGLGSGGSIRSS 34.944946 546.276049792767 0.0 6701.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 1.7838329076766968 2.0 False 13.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6709 34.959 800.0 153490.0 25 0 13033.0 + -1 HCLYDQEKV 9 141 596.2784763296529 1190.5423997261055 2 596.2788574099541 MULTI CID FTMS 0 0 0 6701 202999.53125 1.0 0 0.0 8 Carbamidomethyl (C) _HC(Carbamidomethyl (C))LYDQEKV_ REV__ENSG00000106636|ENST00000223369|YKT6;REV__ENST00000447123.5_1_7:44240734-44251164:+|nuORF;REV__nc|ENSG00000106636|O15498-2|YKT6 17.11289562659939 0.3734572693229295 3 {I|L}P 2 -1 44.464 0.0 0.0 3.7348 0.0 0.0 0.0 977.3853688480332 977.3853688480332 13.25105742726416 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}P 3.7348 - 294 + 1 2.113 96449.5 0.8399999737739563 1670 5037 6701 HBL1_DMSO_200M_050219_1,6709 HBL1_DMSO_200M_050219_1,6709,HCLYDQEKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6710 34.963 225.0 324580.0 25 0 36927.0 + 39441 VANTMRTSL 9 94 504.76135640555736 1007.5081598779147 2 504.7618591189384 MULTI CID FTMS 0 0 0 6701 174015.890625 0.4126021630589996 -3 0.1093521118164062 9 Oxidation (M) _VANTM(Oxidation (M))RTSL_ ENSG00000150753|ENST00000280326|CCT5;ENST00000508451.1_1_5:10250422-10254994:+|nuORF;ENST00000510326.5_1_5:10250452-10254343:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5 51.629811660486645 0.0367964933207742 3 VANTH 5 5 73.998 0.0 0.0 7.3447 0.0 0.0 0.0 482.2220531146805 482.2220531146805 36.64651886415513 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.3252574989159953 0.805462187404089 VANTH 7.3447 - 117 + 1 2.113 61823.5 1.0 1671 5037 6701 HBL1_DMSO_200M_050219_1,6710 HBL1_DMSO_200M_050219_1,6710,VANTMRTSL True False VANTMRTSL 34.963014 504.761859118938 2929509.75 6701.0 ENSG00000150753|ENST00000280326|CCT5;;ENST00000508451.1_1_5:10250422-10254994:+|nuORF;;nc|ENSG00000150753|P48643-2|CCT5;;ENST00000510326.5_1_5:10250452-10254343:+|nuORF 9.336702823638916 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6711 34.968 262.0 255150.0 25 0 28070.0 + 23027 LSKKEQAV 8 110 451.7685660288409 901.5225791244818 2 451.7686950564384 MULTI CID FTMS 0 0 0 6701 147171.421875 1.0 0 0.0 10 Unmodified _LSKKEQAV_ REV__ENSG00000283599|ENST00000636096|unknown 23.1484247019978 0.5573009939494978 3 TV 2 -1 18.315 0.0 0.0 2.0316 0.0 0.0 683.39560876491 0.0 683.39560876491 0.0 8.782577358173755 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 TV 2.0316 - 240 + 1 2.113 59848.2 1.0 1672 5037 6701 HBL1_DMSO_200M_050219_1,6711 HBL1_DMSO_200M_050219_1,6711,LSKKEQAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6713 34.972 63.0 732050.0 25 0 96786.0 + 16468 KAISGVHTV 9 87 456.2689482239657 910.5233435147314 2 456.2689391970634 MULTI CID FTMS 0 0 0 6712 868516.1875 0.1546375970317256 4 -0.2802658081054687 1 Unmodified _KAISGVHTV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 85.64151623876279 0.0161498729896241 3 {[TV]|[{I|L}S]}H[VG]AKTV 9 5 + 40.034 0.0 0.0 4.3968 4.3968 79.172 0.0 0.0 0.0 2.9930413935122857 1.2742858721055512 1.2742858721055512 6.17046012758685 0 0.6595680409956017 0.8538719643217619 0.3807196863200844 0.0 {[TV]|[{I|L}S]}H[VG]AKTV;[KA]{I|L}[HD]KTV;[HT]V[VG]AKTV;{[TV]|[{I|L}S]}H[VG]S{I|L}AK;{[TV]|[{I|L}S]}HRSRR;[HT]AA{I|L}AKTV;[HT]V[VG]S{I|L}AK;[HT]VRSRR;{[TV]|[{I|L}S]}H[VG]A{[TV]|[{I|L}S]}K;[HT]AA{I|L}S{I|L}AK 4.3968;3.7191;3.3715;3.2549;2.694;2.6039;2.2296;1.6687;1.6131;1.4619 -;-;-;-;-;-;-;-;-;- 288 1 2.114 43577.7 1.0 1673 5038 6712 HBL1_DMSO_200M_050219_1,6713 HBL1_DMSO_200M_050219_1,6713,KAISGVHTV True True KAISGVHTV 34.972419 456.268939197063 98689746.125 6712.0 ENSG00000180574|ENST00000538173|EIF2S3B;;ENSG00000130741|ENST00000253039|EIF2S3;;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 5.614676475524902 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6714 34.986 800.0 146260.0 25 0 10794.0 + 34883 SQGQPPPAV 9 156 440.7301311926267 0 440.7301818728447 PEAK CID FTMS 0 0 0 6712 84175.8984375 0.7825370113090585 1 -0.0566825866699218 2 Unmodified _SQGQPPPAV_ ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB 39.94969957227396 0.061964645358372 3 PPVD 4 7 25.019 0.0 0.0 2.8449 0.0 0.0 400.17097896783787 68.05136285953358 468.22234182737145 0.0 0.0 0.0 0.0 0 1.25 0.0 0.25 0.0 PPVD 2.8449 - 108 + 1 2.114 92748.5 0.550000011920929 1674 5038 6712 HBL1_DMSO_200M_050219_1,6714 HBL1_DMSO_200M_050219_1,6714,SQGQPPPAV True True SQGQPPPAV 34.986233 440.730181872845 1947417.875 6712.0 nc|ENSG00000186260|Q9ULH7|MRTFB;;ENSG00000186260|ENST00000571589|MRTFB 6.940031210581462 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6715 34.988 54.0 1283100.0 25 0 155580.0 + 32560 SARTPGPAV 9 85 428.23782143715977 854.4610899411196 2 428.2376281619072 MULTI CID FTMS 0 0 0 6712 933608.5625 0.5303997028743568 -2 0.0946121215820312 3 Unmodified _SARTPGPAV_ ENSG00000178741|ENST00000322347|COX5A 21.53697664764585 0.2571576504437394 3 PAV 3 6 33.94 0.0 0.0 3.9721 0.0 0.0 569.2922129696389 0.0 569.2922129696389 0.0 28.4556125503638 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + PAV 3.9721 + + 30 1 2.114 59437.2 1.0 1675 5038 6712 HBL1_DMSO_200M_050219_1,6715 HBL1_DMSO_200M_050219_1,6715,SARTPGPAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6716 34.992 247.0 431830.0 25 0 56949.0 + 13017 HASPVRPTV 9 103 482.2728231001633 962.5310932671266 2 482.2725707888603 MULTI CID FTMS 0 0 0 6712 294606.84375 0.8064233680789098 -1 0.0461463928222656 4 Unmodified _HASPVRPTV_ ENST00000332780.3_1_3:49209094-49210164:+|nuORF 29.081581746732265 0.1611639662936252 3 HASV 4 5 63.092 0.0 0.0 6.5548 0.0 0.0 0.0 565.3126314752561 565.3126314752561 49.411227221304046 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.4247425010840047 0.0 HASV 6.5548 - 90 + 1 2.114 84870.5 1.0 1676 5038 6712 HBL1_DMSO_200M_050219_1,6716 HBL1_DMSO_200M_050219_1,6716,HASPVRPTV False True HASPVRPTV 34.992216 482.27257078886 1897083.0 6712.0 ENST00000332780.3_1_3:49209094-49210164:+|nuORF 6.1503580411275225 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6717 34.996 220.0 309880.0 25 0 51107.0 + 35644 SVDAHTAEV 9 99 464.7222050210042 927.4298571088084 2 464.7220947146416 MULTI CID FTMS 0 0 0 6712 227302.71875 0.8114034872441079 -1 0.0461463928222656 5 Unmodified _SVDAHTAEV_ ENSG00000162521|ENST00000373493|RBBP4;nc|ENSG00000162521|Q09028-2|RBBP4;nc|ENSG00000162521|Q09028-3|RBBP4;nc|ENSG00000162521|Q09028-4|RBBP4 34.10243960390752 0.1078313939113124 3 [VS][{M(Oxidation (M))|F}V]ATD 7 6 40.334 0.0 0.0 4.349 0.0 0.0 0.0 205.07280908756096 205.07280908756096 25.730231979947646 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.3851518780601924 0.0 [VS][{M(Oxidation (M))|F}V]ATD 4.349 - 221 + 1 2.114 58644.8 1.0 1677 5038 6712 HBL1_DMSO_200M_050219_1,6717 HBL1_DMSO_200M_050219_1,6717,SVDAHTAEV True True SVDAHTAEV 34.996362 464.722094714642 1265845.75 6712.0 nc|ENSG00000162521|Q09028-3|RBBP4;;ENSG00000162521|ENST00000373493|RBBP4;;nc|ENSG00000162521|Q09028-2|RBBP4;;nc|ENSG00000162521|Q09028-4|RBBP4 3.571678717931112 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6718 35.0 217.0 434500.0 25 0 23146.0 -1 WCALSHHER 9 124 399.1860600324755 0 399.1859313845634 PEAK CID FTMS 0 0 0 6712 175479.40625 0.5448608670921984 8 -0.5868186950683594 6 Carbamidomethyl (C) _WC(Carbamidomethyl (C))ALSHHER_ ENSG00000091513|ENST00000402696|TF;nc|ENSG00000091513|P02787|TF 9.243775137331635 0.3209458919518749 3 E 1 -1 5.4846 0.0 0.0 0.6887 0.0 0.0 397.1852476510854 267.09931360416255 664.2845612552479 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.6887 + + 15 + 1 2.114 77640.2 1.0 1678 5038 6712 HBL1_DMSO_200M_050219_1,6718 HBL1_DMSO_200M_050219_1,6718,WCALSHHER False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6719 35.007 381.0 193620.0 25 0 30935.0 4704 DDRVSDEEKV 10 109 397.8545271892865 0 397.8540222048759 PEAK CID FTMS 0 0 0 6712 152727.9375 0.9707621911766064 1 -0.0566825866699218 7 Unmodified _DDRVSDEEKV_ ENSG00000116489|ENST00000263168|CAPZA1;ENST00000476936.5_1_1:113162466-113209756:+|nuORF;ENST00000485542.5_1_1:113162466-113192092:+|nuORF 3.2813086475875832 0.3961065659209837 3 E 1 9 2.9759 0.0 0.0 0.37494 0.0 0.0 419.478145099473 242.1512697809204 661.6294148803934 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 + E 0.37494 + + 18 + 1 2.114 63727.9 1.0 1679 5038 6712 HBL1_DMSO_200M_050219_1,6719 HBL1_DMSO_200M_050219_1,6719,DDRVSDEEKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6720 35.021 800.0 252700.0 25 0 60209.0 + 4318 DARQKFRSV 9 117 553.8077214078771 1105.6008898825542 2 553.8090698122978 MULTI CID FTMS 0 0 0 6712 149520.703125 0.2887733653595626 -2 0.0946121215820312 8 Unmodified _DARQKFRSV_ ENSG00000131370|ENST00000383791|SH3BP5;ENST00000426925.5_1_3:15314864-15374612:-|nuORF 24.881564428377168 0.2146028316269493 3 DVQQK 5 6 49.486 0.0 0.0 4.4759 0.0 0.0 0.0 504.2560213678344 504.2560213678344 7.547573918611775 0.0 0.0 0.0 0 0.8252574989159953 0.8239087409443188 0.0 0.3252574989159953 DVQQK 4.4759 - 429 + 1 2.114 154745.8 0.7200000286102295 1680 5038 6712 HBL1_DMSO_200M_050219_1,6720 HBL1_DMSO_200M_050219_1,6720,DARQKFRSV False True DARQKFRSV 35.021123 553.809069812298 2893392.0 6712.0 ENSG00000131370|ENST00000383791|SH3BP5;;ENST00000426925.5_1_3:15314864-15374612:-|nuORF 2.779736558596293 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6721 35.025 176.0 265340.0 25 0 21211.0 37977 TNENIDVN 8 93 459.712492207832 917.410431482464 2 459.7120239138603 MULTI CID FTMS 0 0 0 6712 143836.03125 1.0 0 0.0 9 Unmodified _TNENIDVN_ ENSG00000178691|ENST00000322652|SUZ12 21.74664581756881 0.5868176546531598 3 {NN|[MP]|[D{I|L}]|[EV]}NV 4 5 22.0 0.0 0.0 2.398 0.0 0.0 0.0 473.1644957737329 473.1644957737329 1.5410687620889971 0.0 0.0 0.0 0 0.0 2.0 0.2614393726401688 0.0 {NN|[MP]|[D{I|L}]|[EV]}NV 2.398 - 62 1 2.114 41221.3 1.0 1681 5038 6712 HBL1_DMSO_200M_050219_1,6721 HBL1_DMSO_200M_050219_1,6721,TNENIDVN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6723 35.041 800.0 132780.0 25 0 14750.0 + -1 GGGGLGSGGSIRSS 14 126 574.7860153762363 1147.5574778192724 2 574.7865478396416 MULTI CID FTMS 0 0 0 6722 90193.4765625 0.6960935843767011 1 -0.0715293884277343 1 Oxidation (M) _FPPGVEM(Oxidation (M))LVSG_ ENSG00000171403|ENST00000246662|KRT9;P35527 13.90604991867851 0.7458848613461305 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}GSG 6 -1 37.224 0.0 0.0 3.2437 0.0 0.0 0.0 602.2940767877561 602.2940767877561 25.285371682087217 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}GSG 3.2437 - 461 + 1 2.114 81600.6 0.6600000262260437 1682 5039 6722 HBL1_DMSO_200M_050219_1,6723 HBL1_DMSO_200M_050219_1,6723,FPPGVEMLVSG False False GGGGLGSGGSIRSS 35.040554 574.786547839642 522542.65625 6722.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 4.880966504414876 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6724 35.043 139.0 790260.0 25 0 255650.0 -1 VDNFDDMN 8 111 329.1230341942684 0 329.0049621462822 PEAK CID FTMS 0 0 0 6722 21658.3515625 0.4045142149165756 16 -0.7666091918945312 2 Oxidation (M) _VDNFDDM(Oxidation (M))N_ ENSG00000156976|ENST00000323963|EIF4A2;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465222.1_1_3:186502277-186502505:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENST00000467585.1_1_3:186502182-186503751:+|nuORF;ENST00000485101.5_1_3:186501384-186502505:+|nuORF;ENST00000486805.5_1_3:186501384-186502505:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2 1.6526216038709556 0.5946231833523572 3 T 1 -1 8.9794 0.0 0.0 1.3683 0.0 0.0 226.9977335723275 325.15625513381383 552.1539887061413 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 T 1.3683 - 28 + 1 2.114 90420.4 1.0 1683 5039 6722 HBL1_DMSO_200M_050219_1,6724 HBL1_DMSO_200M_050219_1,6724,VDNFDDMN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6725 35.049 286.0 456070.0 25 0 31041.0 + 24283 MAREYREKI 9 138 399.2129857616594 1194.6171278851782 3 399.2127563357353 MULTI CID FTMS 0 0 0 6722 317257.90625 0.8221353786437517 -1 0.0566825866699218 3 Unmodified _MAREYREKI_ ENSG00000164924|ENST00000395958|YWHAZ;ENST00000392459.3_1_6:127676988-127677414:+|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENST00000517727.5_1_8:101936341-101962760:-|nuORF 15.738622578938676 0.4106572216562794 3 {I|L}K[{M(Oxidation (M))|F}T]QHHER 9 9 + 35.332 0.0 0.0 2.9576 2.9576 77.473 0.0 0.0 0.0 23.342532286636136 5.111075038854487 5.111075038854487 8.417148051017953 0 0.0 0.0 0.7742275032520141 0.0 {I|L}K[{M(Oxidation (M))|F}T]QHHER;{I|L}K[{M(Oxidation (M))|F}T]QTQQ{[DS]|[MA]|[CV]|TT};{I|L}K[{M(Oxidation (M))|F}T][AG]HHER;{I|L}K[{M(Oxidation (M))|F}T]ET[TA]ER;{I|L}K[{M(Oxidation (M))|F}T]QT{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QA];{I|L}K[{M(Oxidation (M))|F}T]QH[HT]SP;{[DS]|[MA]|[CV]|TT}[HT]HS{I|L}R{[QD]|[EN]|[WG]|[KD]|[RS]};{[DS]|[MA]|[CV]|TT}[HT]HS[RD]K{I|L};{[DS]|[MA]|[CV]|TT}[HT]HQ{[ET]|[MV]}K{I|L};{[DS]|[MA]|[CV]|TT}[HT]HS{I|L}[VG]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.9576;2.253;2.1868;2.0726;1.6429;1.3127;1.1805;0.82395;0.42456;0.41337 -;-;-;-;-;-;-;-;-;- 493 + 1 2.114 107667.4 1.0 1684 5039 6722 HBL1_DMSO_200M_050219_1,6725 HBL1_DMSO_200M_050219_1,6725,MAREYREKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6726 35.062 785.0 206680.0 25 0 22590.0 26394 NTDLNCDVY 9 146 528.7177160554431 1055.4208791776862 2 528.7178222537041 MULTI CID FTMS 0 0 0 6722 285354.21875 1.0 0 0.0 4 Unmodified _NTDLNCDVY_ ENST00000274056.11_1_4:164449515-164449623:-|nuORF 22.736283301280096 0.2418982879461534 3 {[QS]|[NT]}{I|L}D 4 5 35.706 0.0 0.0 3.3831 0.0 0.0 0.0 609.1960921505955 609.1960921505955 6.1167133391848765 0.0 0.0 0.0 0 1.3494850021680094 0.8860566476931632 0.1923877696554315 0.3494850021680094 {[QS]|[NT]}{I|L}D 3.3831 - 316 1 2.114 128479.3 1.0 1685 5039 6722 HBL1_DMSO_200M_050219_1,6726 HBL1_DMSO_200M_050219_1,6726,NTDLNCDVY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6727 35.068 345.0 311370.0 25 0 47931.0 + + 17473 KPEGTPQRI 9 112 513.2906812707281 1024.566809608256 2 513.2904540896416 MULTI CID FTMS 0 0 0 6722 198524.90625 0.6404685197596851 -1 0.0566825866699218 5 Unmodified _KPEQPKWL_ ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 21.74664581756881 0.5868176546531598 3 KPE 3 -1 38.94 0.0 0.0 3.8006 0.0 0.0 0.0 667.35472549983 667.35472549983 19.47621246364342 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 KPE 3.8006 + + 127 + 1 2.114 89575.6 1.0 1686 5039 6722 HBL1_DMSO_200M_050219_1,6727 HBL1_DMSO_200M_050219_1,6727,KPEQPKWL False False KPEGTPQRI 35.068422 513.290454089642 1863938.375 6722.0 ENSG00000177853|ENST00000316045|ZNF518A;;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 0.4450239340464274 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6728 35.082 800.0 364240.0 25 0 45287.0 43759 YEGQSAYDVAD 11 157 609.2499821360984 1216.4854113389968 2 609.2505370974541 MULTI CID FTMS 0 0 0 6722 132791.953125 0.0830269685184141 -2 0.1028289794921875 6 Unmodified _YEGQSAYDVAD_ ENSG00000130052|ENST00000374599|STARD8;ENSG00000164741|ENST00000276297|DLC1;nc|ENSG00000130052|Q92502|STARD8;nc|ENSG00000164741|Q96QB1-1|DLC1;nc|ENSG00000164741|Q96QB1-4|DLC1;nc|ENSG00000164741|Q96QB1-6|DLC1 34.93206674587334 0.2904649469012649 3 {[DA]|[EG]}YQTRKNS 9 9 77.097 0.0 0.0 6.3377 0.0 0.0 0.0 149.96912561588127 149.96912561588127 38.480498255523365 0.0 0.0 0.0 0 1.8539171939081167 1.6989700043360187 1.144599018282542 0.3807196863200844 {[DA]|[EG]}YQTRKNS 6.3377 - 6101 + 1 2.114 213723.1 0.6700000166893005 1687 5039 6722 HBL1_DMSO_200M_050219_1,6728 HBL1_DMSO_200M_050219_1,6728,YEGQSAYDVAD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6729 35.096 800.0 218150.0 25 0 16343.0 -1 PHQNSCNSV 9 186 521.721574190422 1041.4285954476438 2 521.7214233279228 MULTI CID FTMS 0 0 0 6722 133321.859375 0.5419789851158704 -1 0.0566825866699218 7 Carbamidomethyl (C) _PHQNSC(Carbamidomethyl (C))NSV_ ENST00000395172.5_1_8:144124388-144130666:+|nuORF;ENST00000523099.5_1_8:144124388-144124505:+|nuORF;ENST00000524181.5_1_8:144124388-144125605:+|nuORF 30.63653989081413 0.1413794767160703 3 [NS]{[YC]|[HE]}QQNW 8 -1 + 46.821 0.0 0.0 4.4958 4.4958 83.307 0.0 0.0 0.0 3.8397697700392825 17.120084683837007 3.8397697700392825 9.262137858390815 0 0.2614393726401688 0.6777807052660807 1.4957416651753048 0.086696871556164 [NS]{[YC]|[HE]}QQNW;[NS]{[YC]|[HE]}[AG]QNW;[NS]{[YC]|[HE]}QQGGW;[NS]{[YC]|[HE]}Q[AG]NW;{[DA]|[EG]}[HS]GQQNW;[VS]D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QNW;{[ES]|[DT]|[{I|L}C]}{[NV]|[RG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NSV;[NS]{[YC]|[HE]}NN{I|L}{[QS]|[NT]};{[SA]|[TG]}[HD]GQQNW;[NS]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ENW 4.4958;3.6064;3.6064;3.6064;3.5914;3.0921;3.0294;2.9796;2.9487;2.7626 -;-;-;-;-;-;-;-;-;- 1627 1 2.114 132767.1 0.6600000262260437 1688 5039 6722 HBL1_DMSO_200M_050219_1,6729 HBL1_DMSO_200M_050219_1,6729,PHQNSCNSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6731 35.101 152.0 821220.0 25 0 104080.0 + 14768 ILDKKVEKV 9 129 357.89739830097307 1070.6703655031192 3 357.8970519900322 MULTI CID FTMS 0 0 0 6730 424282.65625 0.0284965061472492 10 -0.5776176452636719 1 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 21.799462835604743 0.2538179108695974 3 {I|L}{I|L}DKKVEKV 9 0 + 66.02 0.0 0.0 6.1662 6.1662 89.977 0.0 0.0 0.0 42.566983849803925 13.170107495603574 13.170107495603574 12.800084529637983 0 0.2059771852360797 1.6989700043360187 0.5796896906561032 1.110924374808178 + + {I|L}{I|L}DKKVEKV;{I|L}VEKKVEKV;{I|L}{I|L}DVKKEKV;{I|L}VEVKKEKV;{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}E{I|L}P 6.1662;4.9707;4.3696;3.1741;1.0004 +;-;-;-;- + 316 + 1 2.114 106705.6 1.0 1689 5040 6730 HBL1_DMSO_200M_050219_1,6731 HBL1_DMSO_200M_050219_1,6731,ILDKKVEKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6732 35.112 609.0 152380.0 25 0 12388.0 17697 KPTGVRTNVP 10 106 534.8118963385699 1067.6092397439395 2 534.8116943240166 MULTI CID FTMS 0 0 0 6730 141000.359375 0.1221398054343845 5 -0.4062690734863281 2 Unmodified _KPTGVRTNVP_ ENSG00000165458|ENST00000298229|INPPL1;nc|ENSG00000165458|O15357-2|INPPL1 14.40537977576856 0.6058337302021266 3 KPTGA 5 6 51.454 0.0 0.0 4.8195 0.0 0.0 0.0 610.3319796197874 610.3319796197874 40.61619475865203 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTGA 4.8195 - 32 + 1 2.114 76330.2 1.0 1690 5040 6730 HBL1_DMSO_200M_050219_1,6732 HBL1_DMSO_200M_050219_1,6732,KPTGVRTNVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6733 35.115 141.0 625950.0 25 0 57474.0 + 10319 FSDQSTSAPYD 11 108 406.50230207700935 1216.485076831228 3 406.5023376345634 MULTI CID FTMS 0 0 0 6730 476775.65625 0.6411235514249145 -2 0.1282119750976562 3 Unmodified _FSDQSTSAPYD_ REV__ENSG00000177272|ENST00000369769|KCNA3 8.745405648335112 0.8338865417133445 3 [WY]QT 4 -1 20.027 0.0 0.0 1.6463 0.0 0.0 0.0 635.2309664361936 635.2309664361936 1.5785845722877312 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 [WY]QT 1.6463 - 493 + 1 2.114 75248.9 1.0 1691 5040 6730 HBL1_DMSO_200M_050219_1,6733 HBL1_DMSO_200M_050219_1,6733,FSDQSTSAPYD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6734 35.122 426.0 170190.0 25 0 20177.0 26077 NNNLTKMEGLE 11 91 631.8066756622407 1261.5987983912812 2 631.8087646365166 MULTI CID FTMS 0 0 0 6730 141199.984375 0.8947683649920254 -1 0.0715293884277343 4 Unmodified _NNNLTKMEGLE_ ENSG00000131951|ENST00000570145|LRRC9;nc|ENSG00000131951|Q6ZRR7-2|LRRC9;nc|ENSG00000131951|Q6ZRR7|LRRC9 17.44264345198275 0.6723198055858692 3 {NN|[MP]|[D{I|L}]|[EV]}GG{I|L}GSGG 9 8 76.335 0.0 0.0 6.0506 0.0 0.0 0.0 545.2697237604124 545.2697237604124 44.31417813229345 0.0 0.0 0.0 0 1.316901560044258 2.0 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}GG{I|L}GSGG 6.0506 - 1742 + 1 2.114 57132.1 1.0 1692 5040 6730 HBL1_DMSO_200M_050219_1,6734 HBL1_DMSO_200M_050219_1,6734,NNNLTKMEGLE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6735 35.136 800.0 150800.0 25 0 14390.0 + + 17890 GGGGGLGSGGSIRSS 15 115 603.2988962574353 0 603.2961303591728 PEAK CID FTMS 0 0 0 6730 123984.859375 1.0 0 0.0 5 Unmodified _KQNGSWCRRA_ ENSG00000171403|ENST00000246662|KRT9;P35527 14.838274106304384 0.3381107837965078 3 G{I|L}G{M(Oxidation (M))|F}[MT]GGGN 10 -1 50.501 0.0 0.0 4.1924 0.0 0.0 228.08765745860768 82.06695734195546 310.15461480056314 0.0 0.0 0.0 0.0 0 1.113982988912431 0.0 1.0010912013506126 1.4436726795685342 G{I|L}G{M(Oxidation (M))|F}[MT]GGGN 4.1924 - 1185 + 1 2.114 91057.2 0.6399999856948853 1693 5040 6730 HBL1_DMSO_200M_050219_1,6735 HBL1_DMSO_200M_050219_1,6735,KQNGSWCRRA False False GGGGGLGSGGSIRSS 35.136191 603.296130359173 815359.5625 6730.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 5.404664198557536 2.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6736 35.145 482.0 141530.0 25 0 10923.0 + 44891 YPPNTSKV 8 105 453.2395321522326 904.4645113712652 2 453.2410156130791 MULTI CID FTMS 0 0 0 6730 105567.6171875 0.5267960586399449 7 -0.4938850402832031 6 Unmodified _YPPNTSKV_ ENSG00000105835|ENST00000222553|NAMPT;ENST00000393618.5_1_7:105910735-105925330:-|nuORF;ENST00000486949.5_1_7:105912936-105925330:-|nuORF;ENST00000489358.5_1_7:105912543-105925330:-|nuORF;ENST00000489732.1_1_7:105917445-105925330:-|nuORF 20.453626601364224 0.6087503291685402 3 YP 2 6 42.206 0.0 0.0 4.6664 0.0 0.0 0.0 641.3263235589762 641.3263235589762 30.61243137115873 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + YP 4.6664 + + 77 + 1 2.114 56155.8 1.0 1694 5040 6730 HBL1_DMSO_200M_050219_1,6736 HBL1_DMSO_200M_050219_1,6736,YPPNTSKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6738 35.149 7.1 7913200.0 25 0 1071800.0 + 39290 VADPETRTV 9 57 494.2590889676336 986.5036250020672 2 494.2591430544853 MULTI CID FTMS 0 0 0 6737 9035812.0 1.0 0 0.0 1 Unmodified _VADPETRTV_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 36.506200033944 0.094635877243972 3 VADPE 5 4 75.701 0.0 0.0 7.6737 0.0 0.0 0.0 472.2528574801391 472.2528574801391 65.24350030035414 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.8494850021680094 0.0 + VADPE 7.6737 + + 81 + 1 2.112 48622.4 1.0 1695 5041 6737 HBL1_DMSO_200M_050219_1,6738 HBL1_DMSO_200M_050219_1,6738,VADPETRTV True True VADPETRTV 35.149138 494.259143054485 171576924.0 6737.0 nc|ENSG00000039650|Q96T60-2|PNKP;;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;;ENSG00000039650|ENST00000322344|PNKP;;ENST00000595792.1_1_19:50369586-50370764:-|nuORF 6.969207922617595 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6739 35.15 47.0 958740.0 25 0 70796.0 -1 ESATITCLV 9 72 497.24975653669526 992.4849601401904 2 497.2496826052666 MULTI CID FTMS 0 0 0 6737 1197382.75 0.6072926120881575 8 -0.5149688720703125 2 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 57.47134341890925 0.0274820932774257 3 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 9 -1 + 37.029 0.0 0.0 3.731 3.731 74.204 0.0 0.0 0.0 20.831590422496127 0.5263604413167897 0.5263604413167897 3.423491939388917 0 1.2302046884880935 0.0 0.7614393726401688 0.0 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[TA]DTVV[TA]{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}ATVV[TA]{[ES]|[DT]|[{I|L}C]};[TA]TDVV[TA]{[ES]|[DT]|[{I|L}C]};[TA][RN][KA]A{[{M(Oxidation (M))|F}D]|MM};{[MG]|[TS]}{[CP]|[EA]}VV[TA]{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG][{I|L}P]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}[KA]A{[{M(Oxidation (M))|F}D]|MM} 3.731;3.386;3.2343;1.9736;0.86699;0.78395;0.77245;0.71521 -;-;-;-;-;-;-;- 150 + 1 2.112 44128.8 1.0 1696 5041 6737 HBL1_DMSO_200M_050219_1,6739 HBL1_DMSO_200M_050219_1,6739,ESATITCLV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6740 35.152 43.0 1451400.0 25 0 192400.0 + 17666 KPTGARPSAL 10 63 499.2931313303457 996.5717097274916 2 499.2928954958916 MULTI CID FTMS 0 0 0 6737 1152875.125 0.3727367148655371 16 -0.7236824035644531 3 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 14.40537977576856 0.6058337302021266 3 KPTQ 4 7 42.423 0.0 0.0 4.2569 0.0 0.0 0.0 539.2891329400999 539.2891329400999 31.70941280735775 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTQ 4.2569 - 58 + 1 2.112 54588.7 1.0 1697 5041 6737 HBL1_DMSO_200M_050219_1,6740 HBL1_DMSO_200M_050219_1,6740,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6741 35.153 73.0 671800.0 25 0 45473.0 + 4413 DAVRTKMV 8 75 460.2549927763028 918.4954326194056 2 460.2551757693291 MULTI CID FTMS 0 0 0 6737 748831.5 0.3273750992264843 -1 0.0486412048339843 4 Unmodified _DAVRTKMV_ ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M 34.40172386719151 0.3279500639400574 3 {[DA]|[EG]}VR[KT]MV 8 0 + 47.567 0.0 0.0 5.1788 5.1788 81.019 0.0 0.0 0.0 0.1182529046524649 42.08220305641312 0.1182529046524649 5.400990676322905 0 1.1435078169319297 2.0 0.4247425010840047 0.0 + + {[DA]|[EG]}VR[KT]MV;{[DA]|[EG]}[RK]{[TV]|[{I|L}S]}MV;{[TV]|[{I|L}S]}[RK]ADMV;{[TV]|[{I|L}S]}[RN]{[TV]|[{I|L}S]}MV 5.1788;4.5907;4.127;1.98 +;-;-;- + 72 1 2.112 47929.1 1.0 1698 5041 6737 HBL1_DMSO_200M_050219_1,6741 HBL1_DMSO_200M_050219_1,6741,DAVRTKMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6742 35.155 96.0 542770.0 25 0 59138.0 + 21185 LPDATSSHRTV 11 66 395.2070921144592 1182.5994469435775 3 395.2065612673759 MULTI CID FTMS 0 0 0 6737 478320.1875 0.060662713441652 4 -0.3576278686523437 5 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 17.41995326900377 0.6727917864794439 3 {I|L}PDATSSH 8 3 68.124 0.0 0.0 5.7605 0.0 0.0 0.0 371.2061564984209 371.2061564984209 40.67655058219536 0.0 0.0 0.0 0 0.0 1.0 0.4247425010840047 0.0 + {I|L}PDATSSH 5.7605 + + 179 + 1 2.112 51309.7 1.0 1699 5041 6737 HBL1_DMSO_200M_050219_1,6742 HBL1_DMSO_200M_050219_1,6742,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6743 35.162 344.0 358490.0 25 0 39313.0 + 3428 AYYNPGNPH 9 112 516.7299627662059 1031.4453725992116 2 516.7304565310478 MULTI CID FTMS 0 0 0 6737 276011.28125 1.0 0 0.0 6 Unmodified _AYYNPGNPH_ ENSG00000132471|ENST00000254806|WBP2;ENST00000587642.5_1_17:73842817-73843099:-|nuORF;nc|ENSG00000132471|Q969T9-2|WBP2 44.40701690623563 0.0526327925666318 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YNP[NG]PH 9 0 + 60.64 0.0 0.0 5.8791 5.8791 87.393 0.0 0.0 0.0 45.40632331904946 7.447274948966935 7.447274948966935 9.208187539523747 0 0.7302046884880937 2.0 0.0 0.3494850021680094 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YNP[NG]PH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YGGP[NG]PH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YN[CS][PS]K;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YN[QT]{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[QT]NY{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YGG[QT]{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YGG[QT]G{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WN]|[YH]}[WR]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DC(Carbamidomethyl (C))[KT]{M(Oxidation (M))|F}K;[KT]T[CS]NY{[ES]|[DT]|[{I|L}C]} 5.8791;4.9864;3.8056;3.6311;3.4274;2.7331;2.5347;2.1903;2.0424;1.5385 +;-;-;-;-;-;-;-;-;- + 200 + 1 2.112 94555.8 1.0 1700 5041 6737 HBL1_DMSO_200M_050219_1,6743 HBL1_DMSO_200M_050219_1,6743,AYYNPGNPH True True AYYNPGNPH 35.161611 516.730456531048 1626510.125 6737.0 ENST00000587642.5_1_17:73842817-73843099:-|nuORF;;nc|ENSG00000132471|Q969T9-2|WBP2;;ENSG00000132471|ENST00000254806|WBP2 9.125699679056805 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6744 35.165 200.0 308910.0 25 0 36745.0 -1 HHCLPWAYPM 10 91 437.863576720333 1310.568900761199 3 437.8632079958916 MULTI CID FTMS 0 0 0 6737 261536.46875 0.7280046555181852 -7 0.3323516845703125 7 Carbamidomethyl (C) _HHC(Carbamidomethyl (C))LPWAYPM_ ENST00000533086.5_1_19:15225833-15226058:-|nuORF 4.189502756095605 0.7072575900373772 3 PM 2 -1 21.454 0.0 0.0 1.637 0.0 0.0 1064.4598577682036 0.0 1064.4598577682036 0.0 10.969100130080562 0.0 0.0 0 0.5 0.0 0.0 0.0 PM 1.637 + + 30 1 2.112 55286.4 1.0 1701 5041 6737 HBL1_DMSO_200M_050219_1,6744 HBL1_DMSO_200M_050219_1,6744,HHCLPWAYPM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6745 35.172 336.0 372710.0 25 0 24757.0 17464 KPEGTPQRI 9 153 342.5293050846393 1024.566085854118 3 342.5291015505791 MULTI CID FTMS 0 0 0 6737 177077.40625 1.0 0 0.0 8 Unmodified _KPEGTPQRI_ ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 8.745405648335112 0.6093864874670651 3 [KP]GE[QT]PR{I|L} 9 3 + 27.143 0.0 0.0 2.6493 2.6493 75.935 0.0 0.0 0.0 2.922152515121222 17.465709382052786 2.922152515121222 6.989700043360188 0 0.3252574989159953 0.0 0.0 0.0 [KP]GE[QT]PR{I|L};[KP]GE[WP]AK{I|L};[KP]G[HC][KS]R{I|L};[KP]W[QT]P[VG]{I|L};[KP][C(Carbamidomethyl (C))H][KS]R{I|L};[VP]{[QS]|[NT]}[QT]PR{I|L};[VP]YY[KS]R{I|L} 2.6493;1.967;1.5787;1.113;0.94637;0.57338;0.40678 -;-;-;-;-;-;- 116 1 2.112 104908.3 1.0 1702 5041 6737 HBL1_DMSO_200M_050219_1,6745 HBL1_DMSO_200M_050219_1,6745,KPEGTPQRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6746 35.185 800.0 279140.0 25 0 23730.0 + 4376 DAVKALKA 8 224 408.2531778965703 814.4918028599405 2 408.2527038455009 MULTI CID FTMS 0 0 0 6737 154976.296875 0.813555697676164 -1 0.0486412048339843 9 Unmodified _DAVKALKA_ ENSG00000023697|ENST00000428559|DERA;ENST00000528821.5_1_12:16109876-16185684:+|nuORF 74.92900055777586 0.1049409103209122 3 ADVKA{I|L}KA 8 2 + 77.635 0.0 0.0 9.5317 9.5317 84.848 0.0 0.0 0.0 4.031313562515322 4.957579785432984 4.031313562515322 1.249387366082999 0 1.632470911712249 1.6989700043360187 0.0 0.5629529932484498 ADVKA{I|L}KA;ADVAK{I|L}KA;DAVKA{I|L}KA;ADVKA{I|L}AK;DAVAK{I|L}KA;ADVAK{I|L}AK;DAVKA{I|L}AK;DAVAK{I|L}AK;ADVKA[KA]{I|L};ADVAK[KA]{I|L} 9.5317;9.3783;9.0368;8.9231;8.8834;8.7697;8.4281;8.2747;6.0553;5.9019 -;-;+;-;-;-;-;-;-;- + 608 + 1 2.112 173720.4 0.6600000262260437 1703 5041 6737 HBL1_DMSO_200M_050219_1,6746 HBL1_DMSO_200M_050219_1,6746,DAVKALKA True True DAVKALKA 35.185349 408.252703845501 1029013.625 6737.0 ENST00000528821.5_1_12:16109876-16185684:+|nuORF;;ENSG00000023697|ENST00000428559|DERA 5.944964249928792 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6747 35.199 800.0 319310.0 25 0 18390.0 + 36712 TDKTEKVAVD 10 180 574.2960248848475 1146.577496836495 2 574.2952148318291 MULTI CID FTMS 0 0 0 6737 162175.234375 0.1512054139012047 -2 0.1201705932617187 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))TDKTEKVAVD_ chrX:135779641-135781561|13|36.23|0.53|6.09|-|ENST00000617203|CT45A5,CT45A5;chrX:135781735-135785220|13|147.77|0.31|8.87|-|ENST00000487941|CT45A5,CT45A5;chrX:135881315-135882536|15|139.0|1.0|7.12|-|ENST00000617981|CT45A10,CT45A10;chrX:135885350-135888848|10|46.0|0.05|9.87|-|ENST00000611668|CT45A10,CT45A10;ENSG00000228836|ENST00000698999|CT45A5;ENSG00000268940|ENST00000594565|CT45A1;ENSG00000269096|ENST00000598716|CT45A3;ENSG00000269586|ENST00000682849|CT45A10;ENSG00000270946|ENST00000620704|CT45A9;ENSG00000271449|ENST00000612907|CT45A2;ENSG00000273696|ENST00000610598|CT45A7;ENSG00000278085|ENST00000611660|CT45A8;ENSG00000278289|ENST00000620654|CT45A6 97.28384467902475 0.0088116368208165 3 {[VA]|[{I|L}G]}{[ES]|[DT]|[{I|L}C]}TEKVAVD 11 3 + 85.508 0.0 0.0 7.4577 7.4577 92.538 0.0 0.0 0.0 13.642049046560146 13.565473235138128 13.565473235138128 9.216468214236585 0 2.382913167396961 1.5228787452803376 2.646591250700361 0.0 {[VA]|[{I|L}G]}{[ES]|[DT]|[{I|L}C]}TEKVAVD;{[VA]|[{I|L}G]}[WM]EKVAVD;{[VA]|[{I|L}G]}{[ES]|[DT]|[{I|L}C]}TEKAVVD;{[ET]|[MV]}KEEKVAVD;{[VA]|[{I|L}G]}KVET{[ES]|[DT]|[{I|L}C]}AVD;{[VA]|[{I|L}G]}[WM]EKAVVD;{[VA]|[{I|L}G]}KVTE{[ES]|[DT]|[{I|L}C]}AVD;{[ET]|[MV]}[VG]TEKVAVD;{[VA]|[{I|L}G]}VKET{[ES]|[DT]|[{I|L}C]}AVD;{[VA]|[{I|L}G]}KVE[WM]AVD 7.4577;6.6539;6.3886;6.2679;5.8564;5.5848;5.5783;5.5215;5.4732;5.3174 -;-;-;-;-;-;-;-;-;- 13821 1 2.112 190209.3 0.7300000190734863 1704 5041 6737 HBL1_DMSO_200M_050219_1,6747 HBL1_DMSO_200M_050219_1,6747,TDKTEKVAVD True False TDKTEKVAVD 35.19918 574.295214831829 12284228.0 6737.0 ENSG00000269096|ENST00000598716|CT45A3;;ENSG00000271449|ENST00000612907|CT45A2;;ENSG00000268940|ENST00000594565|CT45A1;;chrX:135885350-135888848|10|46.0|0.05|9.87|-|ENST00000611668|CT45A10,CT45A10;;ENSG00000228836|ENST00000698999|CT45A5;;chrX:135881315-135882536|15|139.0|1.0|7.12|-|ENST00000617981|CT45A10,CT45A10;;ENSG00000270946|ENST00000620704|CT45A9;;ENSG00000278289|ENST00000620654|CT45A6;;ENSG00000278085|ENST00000611660|CT45A8;;chrX:135764450-135768108|10|24.9|0.31|6.33|-|0|CT45A3,CT45A3|1;;ENSG00000273696|ENST00000610598|CT45A7;;ENSG00000269586|ENST00000682849|CT45A10;;chrX:135779641-135781561|13|36.23|0.53|6.09|-|ENST00000617203|CT45A5,CT45A5;;chrX:135781735-135785220|13|147.77|0.31|8.87|-|ENST00000487941|CT45A5,CT45A5 9.685688654581703 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6748 35.213 800.0 156510.0 25 0 22102.0 + 13443 HLQIEEGLMSY 11 105 660.3189762882837 1318.6233996433673 2 660.3202392458916 MULTI CID FTMS 0 0 0 6737 139166.421875 0.8600230796869112 1 -0.1034126281738281 11 Unmodified _HLQIEEGLMSY_ REV__ENSG00000196208|ENST00000381486|GREB1;REV__nc|ENSG00000196208|Q4ZG55-4|GREB1 23.78978130925829 0.5336113198261219 3 [NG]GGGG{I|L}GSGGS{I|L} 13 -1 91.126 0.0 0.0 6.9107 0.0 0.0 0.0 345.1534517877563 345.1534517877563 70.1570185901455 0.0 0.0 0.0 0 2.0501648626366045 0.0 0.805462187404089 0.0 [NG]GGGG{I|L}GSGGS{I|L} 6.9107 - 8086 + 1 2.112 95748.5 0.6700000166893005 1705 5041 6737 HBL1_DMSO_200M_050219_1,6748 HBL1_DMSO_200M_050219_1,6748,HLQIEEGLMSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6749 35.227 800.0 169240.0 25 0 13620.0 + 3342 AYNNQSNRL 9 147 540.2649982635222 1078.5154435938443 2 540.2628051638603 MULTI CID FTMS 0 0 0 6737 106999.625 0.0634464138678929 -2 0.1201705932617187 12 Unmodified _AYNNQSNRL_ ENSG00000141076|ENST00000314423|UTP4;ENST00000569800.5_1_16:69167425-69171817:+|nuORF;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 51.629811660486645 0.0367964933207742 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSN{I|L}R 9 2 + 84.408 0.0 0.0 7.8263 7.8263 87.581 0.0 0.0 0.0 27.147642715192504 4.259687322722812 4.259687322722812 4.259687322722812 0 1.0114393726401687 2.0 0.3252574989159953 1.1989700043360187 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSN{I|L}R;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSNR{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NN[AG]SN{I|L}R;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGGQSN{I|L}R;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGNQSN{I|L}R;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSGG{I|L}R;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQ{I|L}{I|L}{M(Oxidation (M))|F}P;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NN[AG]SNR{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGGQSNR{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGNQSNR{I|L} 7.8263;7.4313;6.9725;6.9725;6.9725;6.9725;6.9665;6.5776;6.5776;6.5776 -;+;-;-;-;-;-;-;-;- + 1116 + 1 2.112 109619.8 0.6399999856948853 1706 5041 6737 HBL1_DMSO_200M_050219_1,6749 HBL1_DMSO_200M_050219_1,6749,AYNNQSNRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6750 35.234 321.0 211790.0 25 0 18266.0 36460 TAAFIPPCPAN 11 109 551.2746251601732 1100.5346973871465 2 551.2756225466728 MULTI CID FTMS 0 0 0 6737 110308.1640625 0.5046572545580527 -1 0.0486412048339843 13 Unmodified _TAAFIPPCPAN_ Harlequin-int_dup68|chr1:206053001-206053902:+|5.79798569661539|0.4316687424735471|3.75|47.0|19|2|sense 5.296884461304476 0.8501568894076437 3 [TA]AQPQ 6 7 22.856 0.0 0.0 2.0768 0.0 0.0 0.0 501.2190981241177 501.2190981241177 12.142588029829083 0.0 0.0 0.0 0 0.0 0.5086383061657274 0.7134679910804405 0.0 [TA]AQPQ 2.0768 - 190 1 2.112 58506.6 1.0 1707 5041 6737 HBL1_DMSO_200M_050219_1,6750 HBL1_DMSO_200M_050219_1,6750,TAAFIPPCPAN False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 6751 35.248 800.0 162390.0 25 0 15563.0 + -1 CLCCFCYC 8 158 536.1653598890616 0 536.1992675662041 PEAK CID FTMS 0 0 0 -1 0 14 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))LCC(Carbamidomethyl (C))FCYC_ REV__L1PA14_dup722|chr4:35336-35828:-|1.1683807787415716|0.0538723938996896|4.44|40.0|28|2|anti-sense 0.7936320650641473 0.5979579398327216 3 {I|L}DK 3 -1 14.693 0.0 0.0 1.3727 0.0 0.0 112.72881587424224 598.3619478815061 711.0907637557484 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DK 1.3727 - 27 + 1 2.112 102243.3 0.5299999713897705 1708 5041 6737 HBL1_DMSO_200M_050219_1,6751 HBL1_DMSO_200M_050219_1,6751,CLCCFCYC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6753 35.253 37.0 787580.0 25 0 89510.0 + + 25528 SQIDQQNSV 9 64 509.74379022071423 1017.4730275082284 2 509.7437927126884 MULTI CID FTMS 0 0 0 6752 1073927.25 0.1853698499852419 2 -0.2061195373535156 1 Unmodified _NEQIQSNSV_ ENSG00000121931|ENST00000369763|LRIF1 21.53697664764585 0.2571576504437394 3 {[QS]|[NT]}{I|L}D 4 -1 18.698 0.0 0.0 1.8377 0.0 0.0 0.0 571.2473554713722 571.2473554713722 5.9336777395950335 0.0 0.0 0.0 0 0.0 0.0 0.0 0.25 {[QS]|[NT]}{I|L}D 1.8377 - 76 1 2.112 28126.8 1.0 1709 5042 6752 HBL1_DMSO_200M_050219_1,6753 HBL1_DMSO_200M_050219_1,6753,NEQIQSNSV False False SQIDQQNSV 35.252552 509.743792712688 26981632.0 6752.0 ENSG00000121931|ENST00000369763|LRIF1 4.9040141105651855 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6754 35.254 47.0 1133800.0 25 0 116810.0 + 32561 SARTPGPAV 9 82 428.23782143715977 854.4610899411196 2 428.2378112673759 MULTI CID FTMS 0 0 0 6752 819873.6875 0.4657848885619055 2 -0.2061195373535156 2 Unmodified _SARTPGPAV_ ENSG00000178741|ENST00000322347|COX5A 27.628801355627647 0.1796483985696185 3 PAV 3 6 33.94 0.0 0.0 3.9721 0.0 0.0 569.2923367314893 0.0 569.2923367314893 0.0 31.95046257204389 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + PAV 3.9721 + + 33 1 2.112 49199.0 1.0 1710 5042 6752 HBL1_DMSO_200M_050219_1,6754 HBL1_DMSO_200M_050219_1,6754,SARTPGPAV False True SARTPGPAV 35.253823 428.237811267376 11843576.0 6752.0 ENSG00000178741|ENST00000322347|COX5A 0.2969565391540527 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6755 35.255 35.0 1929900.0 25 0 307840.0 + 11894 VAPDGKVV 8 82 392.7318419954796 783.4491310577591 2 392.7315856814384 MULTI CID FTMS 0 0 0 6752 1165054.0 0.7628784196772912 -1 0.1034126281738281 3 Unmodified _GLVTAPQV_ ENSG00000116157|ENST00000361314|GPX7 23.1484247019978 0.5573009939494978 3 {[VA]|[{I|L}G]}V[{I|L}T]DN 7 4 35.476 0.0 0.0 4.5281 0.0 0.0 0.0 68.05132471256093 68.05132471256093 22.376750844102773 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8252574989159953 0.0 {[VA]|[{I|L}G]}V[{I|L}T]DN 4.5281 - 157 + 1 2.112 56039.6 1.0 1711 5042 6752 HBL1_DMSO_200M_050219_1,6755 HBL1_DMSO_200M_050219_1,6755,GLVTAPQV False False VAPDGKVV 35.255002 392.731585681438 8574298.0 6752.0 ENSG00000116157|ENST00000361314|GPX7 1.5057613849639893 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6756 35.256 51.0 1627100.0 25 0 138980.0 + 8160 EPPPVKQV 8 104 447.2581928433888 892.5018327535776 2 447.2581970095634 MULTI CID FTMS 0 0 0 6752 1066197.375 0.5419850747861944 -2 0.1520538330078125 4 Unmodified _EPPPVKQV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 38.15118350030904 0.2652218139009398 3 [EP]PP 4 4 28.037 0.0 0.0 3.1414 0.0 0.0 0.0 469.2796724908813 469.2796724908813 16.254582595924294 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.0 0.0 + [EP]PP 3.1414 + + 77 + 1 2.112 70434.4 1.0 1712 5042 6752 HBL1_DMSO_200M_050219_1,6756 HBL1_DMSO_200M_050219_1,6756,EPPPVKQV False True EPPPVKQV 35.256333 447.258197009563 62972592.0 6752.0 ENST00000466404.5_1_19:54621832-54631576:+|nuORF;;nc|ENSG00000105618|Q8WWY3-3|PRPF31;;ENSG00000105618|ENST00000321030|PRPF31;;nc|ENSG00000105618|Q8WWY3-4|PRPF31 4.192813793818156 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6757 35.259 103.0 783640.0 25 0 124400.0 + 44857 YPPHVQKV 8 90 323.1837477176532 966.5294137531596 3 323.1831237673759 MULTI CID FTMS 0 0 0 6752 506830.875 0.7095281743081892 3 -0.2542152404785156 5 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 21.74664581756881 0.5868176546531598 3 YPPHVQKV 8 0 + 60.074 0.0 0.0 6.2155 6.2155 89.06 0.0 0.0 0.0 39.17084919941803 8.214562785677657 8.214562785677657 9.262137858390815 0 0.0 1.5228787452803376 0.0 0.0 + + YPPHVQKV;YPPHV[AG]KV 6.2155;5.2572 +;- + 128 + 1 2.112 68901.7 1.0 1713 5042 6752 HBL1_DMSO_200M_050219_1,6757 HBL1_DMSO_200M_050219_1,6757,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6758 35.261 111.0 589800.0 25 0 56603.0 + 12816 GVTFVHPKL 9 92 333.1979866606353 996.572130582106 3 333.1978027224541 MULTI CID FTMS 0 0 0 6752 399838.5625 0.3182270798417852 17 -0.6836357116699219 6 Unmodified _GVTFVHPKL_ REV__ENSG00000278259|ENST00000614623|MYO19;REV__nc|ENSG00000278259|Q96H55-2|MYO19;REV__nc|ENSG00000278259|Q96H55-3|MYO19;REV__nc|ENSG00000278259|Q96H55-4|MYO19 21.74664581756881 0.2544899275067181 3 TPR{I|L} 4 -1 27.964 0.0 0.0 2.806 0.0 0.0 511.28715712715 0.0 511.28715712715 0.0 18.566754275554786 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 TPR{I|L} 2.806 - 72 1 2.112 58564.7 1.0 1714 5042 6752 HBL1_DMSO_200M_050219_1,6758 HBL1_DMSO_200M_050219_1,6758,GVTFVHPKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6759 35.267 319.0 313120.0 25 0 16861.0 + 30296 QYQEARETY 9 103 594.2703667773278 1186.5261806214555 2 594.2704345583916 MULTI CID FTMS 0 0 0 6752 271215.4375 0.8971697922063637 -1 0.1034126281738281 7 Unmodified _QYQEARETY_ ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6 82.5293158979368 0.0169039238599547 3 QYQEA{[RE]|[WV]}TY 9 0 + 77.035 0.0 0.0 6.4925 6.4925 88.037 0.0 0.0 0.0 9.208187539523747 8.565473235138114 8.565473235138114 8.565473235138114 0 0.7887254899964358 1.5228787452803376 1.024227503252014 0.4247425010840047 + + QYQEA{[RE]|[WV]}TY;QYQEY[KT]{NN|[MP]|[D{I|L}]|[EV]};QY[AG]EA{[RE]|[WV]}TY;QYQEA{I|L}Y{[WS]|[C(Carbamidomethyl (C)){I|L}]};QYQEY[{I|L}A]{[WS]|[C(Carbamidomethyl (C)){I|L}]};QYQ[MN][Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]};QY[AG]EY[KT]{NN|[MP]|[D{I|L}]|[EV]};[YQ]Y{I|L}AEHTY;[YQ][{I|L}A]YEHTY;QY[AG]EA{I|L}Y{[WS]|[C(Carbamidomethyl (C)){I|L}]} 6.4925;5.7706;5.7164;5.3992;5.1095;5.0616;4.9945;4.7594;4.4698;4.2652 +;-;-;-;-;-;-;-;-;- + 611 + 1 2.112 77408.1 1.0 1715 5042 6752 HBL1_DMSO_200M_050219_1,6759 HBL1_DMSO_200M_050219_1,6759,QYQEARETY True True QYQEARETY 35.266671 594.270434558392 1823683.375 6752.0 nc|ENSG00000163029|Q96SB8-2|SMC6;;ENSG00000163029|ENST00000448223|SMC6 7.434738636016846 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6760 35.269 93.0 581540.0 25 0 128510.0 34788 SQDPGTHVV 9 77 470.23010219428033 938.4456514553608 2 470.2303344607353 MULTI CID FTMS 0 0 0 6752 258466.9375 0.0098003876786126 35 -1.552490234375 8 Unmodified _SQDPGTHVV_ ENSG00000130935|ENST00000253247|NOL11 20.453626601364224 0.2830276176381075 3 {[QS]|[NT]}D 3 6 20.19 0.0 0.0 2.1514 0.0 0.0 0.0 605.3075953853013 605.3075953853013 2.230749808046326 0.0 0.0 0.0 0 0.5 0.0 0.0 0.6237125054200234 + {[QS]|[NT]}D 2.1514 + + 61 1 2.112 50144.4 1.0 1716 5042 6752 HBL1_DMSO_200M_050219_1,6760 HBL1_DMSO_200M_050219_1,6760,SQDPGTHVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6761 35.283 800.0 117650.0 25 0 13584.0 -1 EWNGLKRHMYG 11 112 703.8342677169278 1405.6539825006555 2 703.8348266482353 MULTI CID FTMS 0 0 0 6752 178201.390625 1.0 0 0.0 9 Oxidation (M) _EWNGLKRHM(Oxidation (M))YG_ ENST00000325212.10_2_11:93412593-93412695:+|nuORF 28.49450938151212 0.4231428536161201 3 GGGGG{I|L}G[PA]{I|L}GGGG[HC] 16 -1 81.175 0.0 0.0 5.7749 0.0 0.0 183.0651570050797 0.0 183.0651570050797 0.0 70.90894901660774 0.0 0.0 0 1.2376954943324543 0.0 0.0 0.0 GGGGG{I|L}G[PA]{I|L}GGGG[HC] 5.7749 - 4773 1 2.112 73299.2 0.6899999976158142 1717 5042 6752 HBL1_DMSO_200M_050219_1,6761 HBL1_DMSO_200M_050219_1,6761,EWNGLKRHMYG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6762 35.286 200.0 307720.0 25 0 49552.0 -1 IPCIPPSSV 9 84 485.25872192531614 968.5028909174324 2 485.2583190798759 MULTI CID FTMS 0 0 0 6752 163503.90625 0.399609977148996 5 -0.3418312072753906 10 Carbamidomethyl (C) _IPC(Carbamidomethyl (C))IPPSSV_ ENSG00000175318|ENST00000309731|GRAMD2A;ENST00000564184.1_1_15:72455114-72459029:-|nuORF;ENST00000564773.1_1_15:72455693-72456104:-|nuORF;ENST00000565233.5_1_15:72454352-72456104:-|nuORF;ENST00000567662.5_1_15:72455885-72456104:-|nuORF 12.531546534597751 0.4974689918368763 3 TSV 3 -1 15.027 0.0 0.0 1.5516 0.0 0.0 663.3443653820792 0.0 663.3443653820792 0.0 4.648415687162954 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 TSV 1.5516 - 63 + 1 2.112 54913.5 1.0 1718 5042 6752 HBL1_DMSO_200M_050219_1,6762 HBL1_DMSO_200M_050219_1,6762,IPCIPPSSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6763 35.3 800.0 184090.0 25 0 12643.0 -1 GEYQCIVS 8 176 478.2142486306561 954.4139443281124 2 478.2141601443291 MULTI CID FTMS 0 0 0 6752 129432.40625 0.6299129957366656 -1 0.1034126281738281 11 Carbamidomethyl (C) _GEYQC(Carbamidomethyl (C))IVS_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 15.847184025352805 0.6768015514314958 3 {[DA]|[EG]}{I|L}K 4 -1 40.467 0.0 0.0 4.24 0.0 0.0 0.0 524.1491793268186 524.1491793268186 24.498147274412183 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[DA]|[EG]}{I|L}K 4.24 - 246 + 1 2.112 115841.4 0.6299999952316284 1719 5042 6752 HBL1_DMSO_200M_050219_1,6763 HBL1_DMSO_200M_050219_1,6763,GEYQCIVS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6764 35.31 584.0 167970.0 25 0 11146.0 + 16469 KAISGVHTV 9 148 456.2689482239657 910.5233435147314 2 456.2686340212822 MULTI CID FTMS 0 0 0 6752 121843.1796875 0.0216939382279271 8 -0.4255638122558594 12 Unmodified _KAISGVHTV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 43.77239144664712 0.0547478964384323 3 [TA]AH{I|L}AKTV 9 6 + 40.75 0.0 0.0 4.4755 4.4755 83.834 0.0 0.0 0.0 5.076221521117638 25.265771502604714 5.076221521117638 10.779842442655289 0 0.5228787452803376 1.0 0.0941876774005248 0.0 [TA]AH{I|L}AKTV;[KA]{I|L}[HD]KTV;{[QD]|[EN]|[WG]|[KD]|[RS]}H{I|L}AKTV;[HT]V[VG]AKTV;[HT]AA{I|L}AKTV;{[QD]|[EN]|[WG]|[KD]|[RS]}HRRTV;[KA]{I|L}[KS]{[YC]|[HE]}V;[TA]AH{I|L}{[TV]|[{I|L}S]}AK;{[QD]|[EN]|[WG]|[KD]|[RS]}HTRRV;[TA]AHT[{I|L}V]AK 4.4755;3.2916;2.8929;2.1988;1.9319;1.7827;0.8778;0.5675;0.31653;0.18071 -;-;-;-;-;-;-;-;-;- 474 1 2.112 76814.5 1.0 1720 5042 6752 HBL1_DMSO_200M_050219_1,6764 HBL1_DMSO_200M_050219_1,6764,KAISGVHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6765 35.324 800.0 128430.0 25 0 16970.0 + 4217 DAPKDYRQV 9 113 546.276318452949 1090.538083972698 2 546.2754394412041 MULTI CID FTMS 0 0 0 6752 118823.0625 0.5246902281130169 5 -0.3418312072753906 13 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 12.240655878213236 0.5053430591993562 3 {[DA]|[EG]}PKD 5 4 34.833 0.0 0.0 3.1941 0.0 0.0 0.0 561.2788588529555 561.2788588529555 5.563025007672877 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.0 0.0 + {[DA]|[EG]}PKD 3.1941 + + 122 + 1 2.112 85180.6 0.6200000047683716 1721 5042 6752 HBL1_DMSO_200M_050219_1,6765 HBL1_DMSO_200M_050219_1,6765,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6766 35.339 800.0 198650.0 25 0 34301.0 + -1 VANVCVALY 9 155 504.76135640555736 1007.5081598779147 2 504.2637512087822 MULTI CID FTMS 0 0 0 6752 108772.2421875 0.5842954611036998 -5 0.3264122009277344 14 Carbamidomethyl (C) _VANVC(Carbamidomethyl (C))VALY_ REV__ENSG00000145757|ENST00000274432|SPATA9;REV__nc|ENSG00000145757|Q9BWV2-2|SPATA9 16.942295170755138 0.3780752226737986 3 VANTH 5 -1 52.273 0.0 0.0 5.1883 0.0 0.0 0.0 482.2201390533684 482.2201390533684 20.84605507340511 0.0 0.0 0.0 0 0.7491348669726234 1.5228787452803376 0.0 0.0 VANTH 5.1883 - 266 + 1 2.112 123438.4 0.5400000214576721 1722 5042 6752 HBL1_DMSO_200M_050219_1,6766 HBL1_DMSO_200M_050219_1,6766,VANVCVALY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6767 35.353 800.0 76597.0 25 0 10682.0 + + -1 YGQTLGQAQAHSQEQ 15 90 823.3813777072816 1644.748202481363 2 823.8824340701103 MULTI CID FTMS 0 0 0 6752 94157.8046875 0.9616066608592498 -1 0.1034126281738281 15 Oxidation (M) _FWM(Oxidation (M))LWDLRYHY_ ENST00000492199.1_1_9:133511276-133512406:+|nuORF;ENSG00000107164|ENST00000319725|FUBP3;nc|ENSG00000107164|Q96I24-2|FUBP3 0.3506318815782774 0.8734936314171269 3 T{I|L}{[QG]|[NA]}Y 5 -1 23.015 0.0 0.0 1.3993 0.0 0.0 348.14984068664154 731.3275240533811 1079.4773647400227 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.4247425010840047 T{I|L}{[QG]|[NA]}Y 1.3993 - 847 + 1 2.112 50473.1 0.4300000071525574 1723 5042 6752 HBL1_DMSO_200M_050219_1,6767 HBL1_DMSO_200M_050219_1,6767,FWMLWDLRYHY False False YGQTLGQAQAHSQEQ 35.353329 823.88243407011 561715.25 6752.0 ENST00000492199.1_1_9:133511276-133512406:+|nuORF;;ENSG00000107164|ENST00000319725|FUBP3;;nc|ENSG00000107164|Q96I24-2|FUBP3 5.979292154312134 2.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6769 35.36 177.0 246320.0 25 0 34158.0 + -1 DAYMIASDCR 10 64 609.2499821360984 1216.4854113389968 2 609.2501098513603 MULTI CID FTMS 0 0 0 6768 289742.34375 0.1811587817398689 2 -0.1489219665527343 1 Carbamidomethyl (C),Oxidation (M) _DAYM(Oxidation (M))IASDC(Carbamidomethyl (C))R_ REV__ENSG00000166704|ENST00000551380|ZNF606 17.11289562659939 0.5604042439455784 3 {[DA]|[EG]}YQT[RK]N 8 -1 55.45 0.0 0.0 4.5582 0.0 0.0 0.0 237.00092493228752 237.00092493228752 43.76795939188455 0.0 0.0 0.0 0 1.274227503252014 1.6989700043360187 0.3494850021680094 0.3807196863200844 {[DA]|[EG]}YQT[RK]N 4.5582 - 176 + 1 2.112 36728.5 1.0 1724 5043 6768 HBL1_DMSO_200M_050219_1,6769 HBL1_DMSO_200M_050219_1,6769,DAYMIASDCR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6770 35.374 800.0 82198.0 25 0 8347.9 + 24799 MPITTIKTTT 10 91 553.8077214078771 1105.6008898825542 2 553.8074828982353 MULTI CID FTMS 0 0 0 6768 42421.0546875 0.0819289266849575 3 -0.2012596130371093 2 Unmodified _MPITTIKTTT_ REV__ENSG00000158636|ENST00000695367|EMSY;REV__nc|ENSG00000158636|Q7Z589-2|EMSY;REV__nc|ENSG00000158636|Q7Z589-4|EMSY;REV__nc|ENSG00000158636|Q7Z589-5|EMSY;REV__nc|ENSG00000158636|Q7Z589-6|EMSY;REV__nc|ENSG00000158636|Q7Z589|EMSY 12.240655878213236 0.6421556946785427 3 MPPE 4 -1 44.157 0.0 0.0 3.9939 0.0 0.0 0.0 648.3950990355944 648.3950990355944 33.879101117075535 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 MPPE 3.9939 - 28 + 1 2.112 55942.7 0.7300000190734863 1725 5043 6768 HBL1_DMSO_200M_050219_1,6770 HBL1_DMSO_200M_050219_1,6770,MPITTIKTTT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6771 35.375 34.0 1868500.0 25 0 182990.0 + 24441 MGYVHRSV 8 76 316.8285638640458 947.4638621923376 3 316.8286620974541 MULTI CID FTMS 0 0 0 6768 1513616.125 1.0 0 0.0 3 Unmodified _MGYVHRSV_ ENSG00000266173|ENST00000336174|STRADA;nc|ENSG00000266173|Q7RTN6-2|STRADA;nc|ENSG00000266173|Q7RTN6-3|STRADA;nc|ENSG00000266173|Q7RTN6-4|STRADA;nc|ENSG00000266173|Q7RTN6-5|STRADA;nc|ENSG00000266173|Q7RTN6-6|STRADA 6.1918466704503565 0.7867481086916068 3 MGYVHVRS 8 2 + 41.702 0.0 0.0 4.4014 4.4014 75.383 0.0 0.0 0.0 31.423974438934028 5.810935890735216 5.810935890735216 3.0102999566398125 0 0.0 0.0 0.0 0.0 MGYVHVRS;MGYVVHRS;MV[YG]HVRS;MV[YG]VHRS;{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}VHVRS;{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}VVHRS;M[YR]HVRS;MV[YR]HRS;M[YR]VHRS 4.4014;4.0837;3.2437;2.9259;2.9259;2.6082;2.5671;2.2494;2.2494 -;-;-;-;-;-;-;-;- 89 + 1 2.112 60484.6 1.0 1726 5043 6768 HBL1_DMSO_200M_050219_1,6771 HBL1_DMSO_200M_050219_1,6771,MGYVHRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6772 35.376 52.0 931420.0 25 0 134170.0 + 29357 KQTDDGRWAHVV 12 92 470.758769292244 939.502985651288 2 470.7586852908134 MULTI CID FTMS 0 0 0 6768 627699.0625 0.7453821926331056 -2 0.2087059020996093 4 Unmodified _QKDVEPPK_ nc|ENSG00000156983|P55201-3|BRPF1;ENSG00000156983|ENST00000383829|BRPF1;nc|ENSG00000156983|P55201|BRPF1;nc|ENSG00000156983|P55201-4|BRPF1 11.640296217721598 0.738950129755968 3 V 1 7 15.485 0.0 0.0 1.6482 0.0 0.0 822.4235693078296 0.0 822.4235693078296 0.0 3.701813447471221 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.6482 + + 150 + 1 2.112 44187.5 1.0 1727 5043 6768 HBL1_DMSO_200M_050219_1,6772 HBL1_DMSO_200M_050219_1,6772,QKDVEPPK False False KQTDDGRWAHVV 35.37627 470.758685290813 1258953.875 6768.0 nc|ENSG00000156983|P55201-3|BRPF1;;ENSG00000156983|ENST00000383829|BRPF1;;nc|ENSG00000156983|P55201|BRPF1;;nc|ENSG00000156983|P55201-4|BRPF1 -0.3086153001834948 3.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6773 35.379 121.0 516240.0 25 0 61547.0 + 24442 MGYVHRSV 8 78 474.7394730856788 947.4643932381576 2 474.7395812869072 MULTI CID FTMS 0 0 0 6768 459998.0625 1.0 0 0.0 5 Unmodified _MGYVHRSV_ ENSG00000266173|ENST00000336174|STRADA;nc|ENSG00000266173|Q7RTN6-2|STRADA;nc|ENSG00000266173|Q7RTN6-3|STRADA;nc|ENSG00000266173|Q7RTN6-4|STRADA;nc|ENSG00000266173|Q7RTN6-5|STRADA;nc|ENSG00000266173|Q7RTN6-6|STRADA 23.78978130925829 0.5437962211377206 3 MGYVH 5 3 52.652 0.0 0.0 5.5571 0.0 0.0 0.0 357.1892489068969 357.1892489068969 41.542294029923 0.0 0.0 0.0 0 1.0 0.9208187539523752 0.0 0.0 + MGYVH 5.5571 + + 86 + 1 2.112 54820.8 1.0 1728 5043 6768 HBL1_DMSO_200M_050219_1,6773 HBL1_DMSO_200M_050219_1,6773,MGYVHRSV False True MGYVHRSV 35.378783 474.739581286907 9752292.25 6768.0 nc|ENSG00000266173|Q7RTN6-2|STRADA;;nc|ENSG00000266173|Q7RTN6-6|STRADA;;nc|ENSG00000266173|Q7RTN6-4|STRADA;;nc|ENSG00000266173|Q7RTN6-3|STRADA;;ENSG00000266173|ENST00000336174|STRADA;;nc|ENSG00000266173|Q7RTN6-5|STRADA 7.796723524729411 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6774 35.382 160.0 546800.0 25 0 63424.0 + 36469 TAAQVARV 8 117 408.2402459113735 0 408.2400390505791 PEAK CID FTMS 0 0 0 6768 398124.125 0.5369245149061783 -1 0.1052932739257812 6 Unmodified _TAAQVARV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 46.020951573049366 0.1173232347498002 3 AQVA 4 4 33.488 0.0 0.0 4.1116 0.0 0.0 172.08387126580618 270.1578768365844 442.2417481023906 0.0 0.0 0.0 0.0 0 1.079689690656103 0.0 0.0 0.4247425010840047 + AQVA 4.1116 + + 119 + 1 2.112 74817.4 1.0 1729 5043 6768 HBL1_DMSO_200M_050219_1,6774 HBL1_DMSO_200M_050219_1,6774,TAAQVARV True True TAAQVARV 35.381928 408.240039050579 6847311.0 6768.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 2.188050518433253 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6775 35.385 151.0 529370.0 25 0 61105.0 + -1 TGARPSAL 8 103 386.55221438697697 2313.269627522262 6 386.7190124392509 MULTI CID FTMS 0 0 0 6768 319783.3125 0.1304710933613655 -2 0.2087059020996093 7 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;ENSG00000227057|ENST00000374617|WDR46 3 A{I|L} 2 -1 16.454 0.0 0.0 0.71127 0.0 0.0 2111.1378048677684 0.0 2111.1378048677684 0.0 0.833748664102334 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L} 0.71127 - 124 + 1 2.112 66515.6 1.0 1730 5043 6768 HBL1_DMSO_200M_050219_1,6775 HBL1_DMSO_200M_050219_1,6775, False False TGARPSAL 35.384926 386.719012439251 11100921.0 6768.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 1.7184302806854248 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6776 35.388 157.0 461850.0 25 0 164950.0 + 2727 ATHRTGPPP 9 88 467.2483283932917 932.4821038533834 2 467.2519103884697 MULTI CID FTMS 0 0 0 6768 300847.1875 1.0 0 0.0 8 Unmodified _ATHRTGPPP_ REV__ENSG00000213654|ENST00000375040|GPSM3 12.531546534597751 0.4974689918368763 3 V 1 -1 11.42 0.0 0.0 1.2247 0.0 0.0 815.4028324684209 0.0 815.4028324684209 0.0 9.63724666425694 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2247 - 44 + 1 2.112 61106.5 1.0 1731 5043 6768 HBL1_DMSO_200M_050219_1,6776 HBL1_DMSO_200M_050219_1,6776,ATHRTGPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6777 35.392 183.0 386990.0 25 0 55661.0 + + 36606 TAPPSSPKV 9 99 442.2476339812402 882.4807150292804 2 442.2475158572197 MULTI CID FTMS 0 0 0 6768 223948.375 0.4157268212225952 -3 0.2573471069335937 9 Unmodified _TAPITQPGV_ ENSG00000127022|ENST00000247461|CANX;nc|ENSG00000127022|P27824-2|CANX 24.020572477871973 0.2255576514309169 3 [TA]PP{[CA]|SS}PKV 9 -1 + 46.163 0.0 0.0 5.2311 5.2311 80.935 0.0 0.0 0.0 33.688810585875366 5.717748100551852 5.717748100551852 5.02630129605695 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [TA]PP{[CA]|SS}PKV;[TA]PPG{I|L}[QT]V;[TA]P[DG]VPKV;[TA]V{[VA]|[{I|L}G]}[QT]{[HG]|PP};[TA]P[TA][KT]{[HG]|PP};[TA]P[TA][{I|L}V][NP];[TA]G[{I|L}V][TA]P[PG];[VP][MN][R{I|L}][PG];[TP]{[QD]|[EN]|[WG]|[KD]|[RS]}{[VA]|[{I|L}G]}V[PG];[PA]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[R{I|L}][PG] 5.2311;4.6615;4.5323;3.4407;3.3396;3.159;2.9416;1.624;1.3918;0.7054 -;-;-;-;-;-;-;-;-;- 216 + 1 2.112 57771.2 1.0 1732 5043 6768 HBL1_DMSO_200M_050219_1,6777 HBL1_DMSO_200M_050219_1,6777,TAPITQPGV False False TAPPSSPKV 35.391555 442.24751585722 8542433.0 6768.0 ENSG00000127022|ENST00000247461|CANX;;nc|ENSG00000127022|P27824-2|CANX 5.618195056915283 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6778 35.405 800.0 467450.0 25 0 28441.0 + 28896 QAPPPPQQV 9 212 481.2587808144996 960.5030086957992 2 481.2582275271416 MULTI CID FTMS 0 0 0 6768 172138.8125 0.0137941301620665 -5 0.38555908203125 10 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 128.3654064809346 0.0055442937744054 3 [QA]PPPGPAQV 10 2 + 75.561 0.0 0.0 7.8668 7.8668 82.06 0.0 0.0 0.0 9.2309762553856 7.754537344402905 7.754537344402905 0.6694678963061307 0 2.128144697160131 2.0 0.0 1.2887254899964358 [QA]PPPGPAQV;[QA]PPPPGAQV;[QA]PPGPPAQV;[QA]PPPPQQV;[QA]PPPQPQV;[QA]PPPGAPQV;[QA]PGPPPAQV;[QP]APPGPAQV;[QP]APPPGAQV;[QA]PPGPAPQV 7.8668;7.7971;7.1982;6.9057;6.718;6.5879;6.2189;6.07;6.0003;5.9193 -;-;-;+;-;-;-;-;-;- + 2584 1 2.112 280499.3 0.7300000190734863 1733 5043 6768 HBL1_DMSO_200M_050219_1,6778 HBL1_DMSO_200M_050219_1,6778,QAPPPPQQV True True QAPPPPQQV 35.40537 481.258227527142 971832848.0 6768.0 nc|ENSG00000198815|Q9UPW0-2|FOXJ3;;ENSG00000198815|ENST00000361346|FOXJ3 8.29097843170166 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6779 35.419 800.0 147190.0 25 0 13679.0 + 11327 GEYQLPCQCTY 11 117 652.7657860521159 1303.5170191710315 2 652.7664062380791 MULTI CID FTMS 0 0 0 6768 168992.421875 1.0 0 0.0 11 Unmodified _GEYQLPCQCTY_ REV__ENSG00000187122|ENST00000266058|SLIT1 21.59015148037692 0.5852593066373742 3 {[DA]|[EG]}YQT[{M(Oxidation (M))|F}T]WC(Carbamidomethyl (C)){I|L} 10 -1 + 61.679 0.0 0.0 4.7317 4.7317 79.218 0.0 0.0 0.0 6.020599913279625 5.440680443502757 5.440680443502757 5.013487579716767 0 1.110924374808178 1.5228787452803376 0.3252574989159953 0.3494850021680094 {[DA]|[EG]}YQT[{M(Oxidation (M))|F}T]WC(Carbamidomethyl (C)){I|L};{[DA]|[EG]}YQ[WY]WC(Carbamidomethyl (C)){I|L};{[DA]|[EG]}YQT[{M(Oxidation (M))|F}T]WWS;{[DA]|[EG]}YQ[WY]WWS;{[DA]|[EG]}YQT[{M(Oxidation (M))|F}T]{[DA]|[EG]}C(Carbamidomethyl (C)){I|L};{[DA]|[EG]}YQT[{M(Oxidation (M))|F}T]W[CG]{I|L};{[DA]|[EG]}YQ[WY]{[DA]|[EG]}C(Carbamidomethyl (C)){I|L};{[DA]|[EG]}Y[AG]T[{M(Oxidation (M))|F}T]WC(Carbamidomethyl (C)){I|L};{[DA]|[EG]}YQ[WY]W[CG]{I|L};{[DA]|[EG]}YQT[{M(Oxidation (M))|F}T]{[DA]|[EG]}WS 4.7317;4.3471;4.3144;4.1793;4.0287;4.0287;3.8902;3.7606;3.6407;3.6113 -;-;-;-;-;-;-;-;-;- 1120 + 1 2.112 89400.6 0.7099999785423279 1734 5043 6768 HBL1_DMSO_200M_050219_1,6779 HBL1_DMSO_200M_050219_1,6779,GEYQLPCQCTY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6780 35.425 336.0 297960.0 25 0 25059.0 36997 TFLRQALEA 9 156 350.19646289428414 0 350.1972228884697 PEAK CID FTMS 0 0 0 6768 153827.265625 0.3795695884293742 7 -0.3202705383300781 12 Unmodified _TFLRQALEA_ ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11 6.2057823575117 0.3444685223463735 3 E 1 8 8.4113 0.0 0.0 1.2044 0.0 0.0 349.19283538456534 217.12301050357652 566.3158458881419 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + E 1.2044 + + 10 + 1 2.112 81478.0 1.0 1735 5043 6768 HBL1_DMSO_200M_050219_1,6780 HBL1_DMSO_200M_050219_1,6780,TFLRQALEA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6781 35.44 800.0 35452.0 25 0 1326.6 -1 0 64 977.4166572625736 2929.2281423879203 3 977.751513659954 MULTI CID FTMS 0 0 0 6768 131414.03125 1.0 0 0.0 13 3 [KQ]EH 4 -1 15.177 0.0 0.0 0.51813 0.0 0.0 0.0 2403.946318007314 2403.946318007314 1.4659125070036083 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 [KQ]EH 0.51813 - 24 1 2.112 26119.6 0.5099999904632568 1736 5043 6768 HBL1_DMSO_200M_050219_1,6781 HBL1_DMSO_200M_050219_1,6781, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6782 35.454 800.0 162910.0 25 0 9716.0 + 36393 SYQRSMHAY 9 173 381.5066285924227 1141.4980563774682 3 381.5061828494072 MULTI CID FTMS 0 0 0 6768 130921.765625 1.0 0 0.0 14 Unmodified _SYQRSMHAY_ ENSG00000139437|ENST00000405876|TCHP;ENST00000537218.1_1_12:110338138-110342619:+|nuORF 8.155526934196011 0.6299788542272896 3 EAY 3 7 15.406 0.0 0.0 1.3496 0.0 0.0 760.3368758128182 0.0 760.3368758128182 0.0 2.9318250140072184 0.0 0.0 0 0.0 0.0 0.0 0.0 EAY 1.3496 - 158 + 1 2.112 105105.3 0.5099999904632568 1737 5043 6768 HBL1_DMSO_200M_050219_1,6782 HBL1_DMSO_200M_050219_1,6782,SYQRSMHAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6784 35.46 84.0 555390.0 25 0 65041.0 + 39291 VADPETRTV 9 61 494.2590889676336 986.5036250020672 2 494.2589904665947 MULTI CID FTMS 0 0 0 6783 485785.6875 0.0537622614879548 3 -0.135711669921875 1 Unmodified _VADPETRTV_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 19.361941925380144 0.3125782356748823 3 VADPE 5 4 60.433 0.0 0.0 6.126 0.0 0.0 0.0 472.2517794244751 472.2517794244751 53.44335023848103 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + VADPE 6.126 + + 53 + 1 2.121 42744.9 1.0 1738 5044 6783 HBL1_DMSO_200M_050219_1,6784 HBL1_DMSO_200M_050219_1,6784,VADPETRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6785 35.462 91.0 344410.0 25 0 17971.0 + 4414 DAVRTKMV 8 70 460.2549927763028 918.4954326194056 2 460.2550536990166 MULTI CID FTMS 0 0 0 6783 241492.421875 0.1055759614462961 2 -0.100433349609375 2 Unmodified _DAVRTKMV_ ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M 20.453626601364224 0.6087503291685402 3 [KT]RVADMV 8 6 + 35.175 0.0 0.0 3.8297 3.8297 77.334 0.0 0.0 0.0 3.979400086720375 32.70094414149064 3.979400086720375 5.971550665748559 0 0.6861818737241735 0.0 0.0 0.0 [KT]RVADMV;{[DA]|[EG]}[RV][KT]MV;{NN|[MP]|[D{I|L}]|[EV]}KKWMV;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}[KT]MV;[KT]R{[CA]|SS}{[QN]|[E{I|L}]|[KN]}V 3.8297;3.1795;2.6236;1.0882;0.59529 -;+;-;-;- + 84 1 2.121 28349.4 1.0 1739 5044 6783 HBL1_DMSO_200M_050219_1,6785 HBL1_DMSO_200M_050219_1,6785,DAVRTKMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6786 35.463 50.0 1009000.0 25 0 135460.0 + 17667 KPTGARPSAL 10 68 499.2931313303457 996.5717097274916 2 499.2931091189384 MULTI CID FTMS 0 0 0 6783 1116459.875 0.3609632795977693 19 -0.6393280029296875 3 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 10.799506525563784 0.666336781075408 3 KPT 3 7 35.445 0.0 0.0 3.5567 0.0 0.0 0.0 667.3551988750036 667.3551988750036 21.00833760139686 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + KPT 3.5567 + + 28 + 1 2.121 43145.3 1.0 1740 5044 6783 HBL1_DMSO_200M_050219_1,6786 HBL1_DMSO_200M_050219_1,6786,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6787 35.465 70.0 1061400.0 25 0 82299.0 + 8095 EPFKTKKI 8 94 330.87080593862834 989.590588416085 3 330.8706848025322 MULTI CID FTMS 0 0 0 6783 742955.3125 0.6528779821341892 1 -0.048095703125 4 Unmodified _EPFKTKKI_ ENSG00000109805|ENST00000251496|NCAPG 10.799506525563784 0.7513711607952772 3 [RH][HA]TK{I|L}K 8 6 + 21.371 0.0 0.0 2.1596 2.1596 67.588 0.0 0.0 0.0 1.962724883926661 1.1835650192771323 1.1835650192771323 1.1835650192771323 0 0.0 0.0 0.0 0.4538271422956003 [RH][HA]TK{I|L}K;[RH][HA]TKK{I|L};[RH][HA]{I|L}[KT]K 2.1596;2.04;0.20687 -;-;- 94 + 1 2.121 63246.4 1.0 1741 5044 6783 HBL1_DMSO_200M_050219_1,6787 HBL1_DMSO_200M_050219_1,6787,EPFKTKKI False True EPFKTKKI 35.464622 330.870684802532 5796289.0 6783.0 ENSG00000109805|ENST00000251496|NCAPG 0.7287850280602773 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6788 35.469 211.0 310690.0 25 0 9666.0 -1 0 80 628.6921921431754 3138.4245783828765 5 629.0937988162041 MULTI CID FTMS 0 0 0 6783 298317.75 0.3045038018286111 -2 0.2061195373535156 5 3 WTGPS 5 -1 43.315 0.0 0.0 1.3802 0.0 0.0 1375.612467593796 1231.5519319472987 2607.164399541095 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 0.3807196863200844 0.0 WTGPS 1.3802 - 221 + 1 2.121 54332.4 1.0 1742 5044 6783 HBL1_DMSO_200M_050219_1,6788 HBL1_DMSO_200M_050219_1,6788, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6789 35.473 232.0 390840.0 25 0 50282.0 -1 HHCLPWAYPM 10 103 437.863576720333 1310.568900761199 3 437.8635742068291 MULTI CID FTMS 0 0 0 6783 291130.875 0.810382710212695 -4 0.3581733703613281 6 Carbamidomethyl (C) _HHC(Carbamidomethyl (C))LPWAYPM_ ENST00000533086.5_1_19:15225833-15226058:-|nuORF 7.101721422024254 0.6937868747866316 3 PM 2 -1 18.812 0.0 0.0 1.4354 0.0 0.0 1064.4653338312062 0.0 1064.4653338312062 0.0 7.029544691716563 0.0 0.0 0 0.5 0.0 0.0 0.0 PM 1.4354 + + 54 1 2.121 74419.8 1.0 1743 5044 6783 HBL1_DMSO_200M_050219_1,6789 HBL1_DMSO_200M_050219_1,6789,HHCLPWAYPM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6790 35.477 204.0 376250.0 25 0 31634.0 + 21186 LPDATSSHRTV 11 105 395.2070921144592 1182.5994469435775 3 395.2063781619072 MULTI CID FTMS 0 0 0 6783 208817.984375 0.0264832341988576 7 -0.2491416931152343 7 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 20.87787396458995 0.6008632127290732 3 {I|L}PDATSSHRS{I|L} 11 2 + 78.198 0.0 0.0 6.6124 6.6124 93.204 0.0 0.0 0.0 52.25582976495439 7.896049436251999 7.896049436251999 28.848211006808555 0 0.4247425010840047 0.958607314841775 1.0356668758921828 0.0 {I|L}PDATSSHRS{I|L};{I|L}PW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}HRS{I|L};{[DA]|[EG]}[W{I|L}]{I|L}STA{[HG]|PP}{I|L};{[DA]|[EG]}[W{I|L}]{I|L}ST[HQ]{I|L};{[DS]|[MA]|[CV]|TT}[WP]{I|L}STA{[HG]|PP}{I|L};[PS]G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}STA{[HG]|PP}{I|L};[W{I|L}]{[DA]|[EG]}{I|L}STA{[HG]|PP}{I|L};{[DS]|[MA]|[CV]|TT}[WP]{I|L}ST[HQ]{I|L};[PS]G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ST[HQ]{I|L};[W{I|L}]{[DA]|[EG]}{I|L}ST[HQ]{I|L} 6.6124;4.173;3.1115;2.5555;2.4546;2.269;2.152;1.8985;1.7099;1.596 -;-;-;-;-;-;-;-;-;- 333 + 1 2.121 68521.7 1.0 1744 5044 6783 HBL1_DMSO_200M_050219_1,6790 HBL1_DMSO_200M_050219_1,6790,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6791 35.481 229.0 239980.0 25 0 27109.0 39330 VAESTSLNIDV 11 98 574.2960248848475 1146.577496836495 2 574.2962524294853 MULTI CID FTMS 0 0 0 6783 185931.390625 0.173354661610488 1 -0.048095703125 8 Unmodified _VAESTSLNIDV_ nc|ENSG00000078674|Q15154-3|PCM1 10.799506525563784 0.8105043987015127 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VA[KP]VD 10 10 + 11.168 0.0 0.0 0.97407 0.97407 73.361 0.0 0.0 0.0 0.3310146580797823 0.0313204123857566 0.0313204123857566 5.653380185010477 0 0.3807196863200844 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VA[KP]VD;[QA][EP][YR]AVVD;[QA][EP]P[RH]VVD;[MT]{[WT]|[RM]}VA[KP]VD;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RR[WR]VD;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VA[WR]P;[QA][WH][RH]VVD;[MT]VA{[ES]|[DT]|[{I|L}C]}A[KP]VD;[MT]{[WT]|[RM]}VA[WR]P;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VA[{I|L}T]QP 0.97407;0.481;0.28752;0.22589;0.18643;0.15963;0.13394;0.12074;0.11395;0.050665 -;-;-;-;-;-;-;-;-;- 359 + 1 2.121 49521.3 1.0 1745 5044 6783 HBL1_DMSO_200M_050219_1,6791 HBL1_DMSO_200M_050219_1,6791,VAESTSLNIDV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6792 35.488 408.0 331090.0 25 0 51478.0 + 44865 YPPHVQKV 8 158 484.2715911815882 966.5286294299764 2 484.2711364626884 MULTI CID FTMS 0 0 0 6783 146447.53125 0.5351862574131239 4 -0.176605224609375 9 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 36.04419817259434 0.3004715606373109 3 YPPHVQKV 8 0 + 48.653 0.0 0.0 5.0338 5.0338 80.7 0.0 0.0 0.0 18.73117245623625 3.1630630024785944 3.1630630024785944 5.563025007672877 0 0.3807196863200844 2.0 0.0 0.0 + + YPPHVQKV;YPPHVQVK;YPP[KQ][HV]V;YPPHV[AG]KV;YPPHV[AG]VK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV]{I|L}{I|L}{[CP]|[EA]};[QP]K[KQ]PNQ 5.0338;4.4582;4.1574;4.0755;3.4999;1.3866;0.61265 +;-;-;-;-;-;- + 375 + 1 2.121 107819.3 1.0 1746 5044 6783 HBL1_DMSO_200M_050219_1,6792 HBL1_DMSO_200M_050219_1,6792,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6793 35.502 800.0 224860.0 25 0 31832.0 + -1 VFNKSECHC 9 151 562.2364250796359 1122.4582972260716 2 562.2362548708916 MULTI CID FTMS 0 0 0 6783 138234.21875 0.5049680648862152 -2 0.2061195373535156 10 Carbamidomethyl (C) _VFNKSEC(Carbamidomethyl (C))HC_ REV__ENSG00000079156|ENST00000190611|OSBPL6;REV__nc|ENSG00000079156|Q9BZF3-2|OSBPL6;REV__nc|ENSG00000079156|Q9BZF3-3|OSBPL6;REV__nc|ENSG00000079156|Q9BZF3-4|OSBPL6;REV__nc|ENSG00000079156|Q9BZF3-5|OSBPL6 26.88365393820708 0.1891292719743517 3 QNVE 4 -1 39.786 0.0 0.0 3.5446 0.0 0.0 634.2203904951552 0.0 634.2203904951552 0.0 13.721251760708476 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.8494850021680094 QNVE 3.5446 - 887 1 2.121 139074.5 0.6499999761581421 1747 5044 6783 HBL1_DMSO_200M_050219_1,6793 HBL1_DMSO_200M_050219_1,6793,VFNKSECHC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6795 35.507 77.0 560930.0 25 0 63378.0 + 3343 AYNNQSNRL 9 71 540.2649982635222 1078.5154435938443 2 540.2650634646416 MULTI CID FTMS 0 0 0 6794 735179.8125 0.4359316460332918 2 -0.087615966796875 1 Unmodified _AYNNQSNRL_ ENSG00000141076|ENST00000314423|UTP4;ENST00000569800.5_1_16:69167425-69171817:+|nuORF;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 51.629811660486645 0.0367964933207742 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSN[R{I|L}] 9 0 + 83.364 0.0 0.0 7.7295 7.7295 92.654 0.0 0.0 0.0 74.16772480037345 5.642492736872597 5.642492736872597 9.208187539523747 0 1.274227503252014 2.0 0.0 1.174742501084005 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSGG[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NN[AG]SN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGGQSN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGNQSN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NN[AG]SGG[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGGQSGG[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGNQSGG[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGG[AG]SN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGN[AG]SN[R{I|L}] 7.7295;6.8757;6.8757;6.8757;6.8757;6.026;6.026;6.026;6.026;6.026 +;-;-;-;-;-;-;-;-;- + 173 + 1 2.121 37148.0 1.0 1748 5045 6794 HBL1_DMSO_200M_050219_1,6795 HBL1_DMSO_200M_050219_1,6795,AYNNQSNRL True True AYNNQSNRL 35.506765 540.265063464642 17900336.0 6794.0 nc|ENSG00000141076|Q969X6-3|UTP4;;ENST00000569800.5_1_16:69167425-69171817:+|nuORF;;ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 6.893062273661296 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6796 35.513 340.0 193870.0 25 0 14309.0 + -1 DVEVAQMGCS 10 100 548.2261045342852 1094.4376561353704 2 548.2267944216728 MULTI CID FTMS 0 0 0 6794 102348.8671875 0.9655836749928248 -5 0.4062690734863281 2 Carbamidomethyl (C) _DVEVAQMGC(Carbamidomethyl (C))S_ REV__ENST00000476724.1_1_1:45119888-45120092:-|nuORF 6.2057823575117 0.6979311171683138 3 [QP]SVTE 6 -1 41.2 0.0 0.0 3.7645 0.0 0.0 0.0 450.1128019696079 450.1128019696079 20.75476481047937 0.0 0.0 0.0 0 0.0 0.7695510786217261 1.6549471895720984 0.0 [QP]SVTE 3.7645 - 136 1 2.121 54227.2 1.0 1749 5045 6794 HBL1_DMSO_200M_050219_1,6796 HBL1_DMSO_200M_050219_1,6796,DVEVAQMGCS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6797 35.514 56.0 1134500.0 25 0 152880.0 + 7048 EELGARAA 8 90 408.7138941383628 815.4132353435257 2 408.7140685915947 MULTI CID FTMS 0 0 0 6794 770350.5 0.6304161584799808 -1 0.048095703125 3 Unmodified _EELGARAA_ ENSG00000179134|ENST00000610417|SAMD4B 24.67388899826682 0.525179942228231 3 EE{I|L}GNRV 7 3 + 42.061 0.0 0.0 5.1582 5.1582 74.564 0.0 0.0 0.0 17.269987279362628 6.3867370718656815 6.3867370718656815 1.0083376013968604 0 0.4247425010840047 1.5228787452803376 0.0 0.5629529932484498 EE{I|L}GNRV;EE{I|L}V{NN|[MP]|[D{I|L}]|[EV]}V;EEVNARV;EENVARV;EEVANRV;EEV{I|L}{NN|[MP]|[D{I|L}]|[EV]}V;EE{I|L}GGGRV;EEGGVARV;EEVGGARV;EEVAGGRV 5.1582;5.0346;4.707;4.707;4.219;4.0954;4.014;3.5628;3.5628;3.0747 -;-;-;-;-;-;-;-;-;- 228 + 1 2.121 53818.7 1.0 1750 5045 6794 HBL1_DMSO_200M_050219_1,6797 HBL1_DMSO_200M_050219_1,6797,EELGARAA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6798 35.518 178.0 478620.0 25 0 70584.0 + 29760 QPQGSFAAPAI 11 100 543.7803286566087 1085.5461043800174 2 543.7811157107353 MULTI CID FTMS 0 0 0 6794 372825.15625 0.2339853359523111 -3 0.2542152404785156 4 Unmodified _QPQGSFAAPAI_ REV__ENSG00000175727|ENST00000319080|MLXIP;REV__ENST00000541750.1_12:122618368-122620257:+|nuORF;REV__nc|ENSG00000175727|Q9HAP2-2|MLXIP;REV__nc|ENSG00000175727|Q9HAP2-4|MLXIP 32.78568957990786 0.3235288296534633 3 [QP]QDT[WK]A{I|L} 9 -1 + 47.258 0.0 0.0 4.3534 4.3534 82.287 0.0 0.0 0.0 26.38924015861121 16.478174818886373 16.478174818886373 9.208187539523747 0 0.7614393726401688 0.0 0.3054621874040891 0.4247425010840047 [QP]QDT[WK]A{I|L};[QP][AG]DT[WK]A{I|L};[AG][RH]TW[{M(Oxidation (M))|F}V]{I|L};[HK][YN]G{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[W{I|L}]G{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L} 4.3534;3.5052;1.6222;1.2309;1.0687 -;-;-;-;- 394 + 1 2.121 71373.1 1.0 1751 5045 6794 HBL1_DMSO_200M_050219_1,6798 HBL1_DMSO_200M_050219_1,6798,QPQGSFAAPAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6799 35.524 355.0 573060.0 25 0 87167.0 + -1 YSCHGEFN 8 147 507.1942874109556 1012.3740218887112 2 507.1946594119072 MULTI CID FTMS 0 0 0 6794 354148.375 0.6972669885622415 -2 0.1489219665527343 5 Carbamidomethyl (C) _YSC(Carbamidomethyl (C))HGEFN_ REV__nc|ENSG00000153982|Q8N9F7-3|GDPD1 18.13498045792455 0.6430038125133779 3 NT[MT] 4 -1 32.664 0.0 0.0 3.2265 0.0 0.0 547.1891227438829 0.0 547.1891227438829 0.0 10.764837301042718 0.0 0.0 0 0.7614393726401688 0.0 0.3807196863200844 0.805462187404089 NT[MT] 3.2265 - 307 1 2.121 158187.3 1.0 1752 5045 6794 HBL1_DMSO_200M_050219_1,6799 HBL1_DMSO_200M_050219_1,6799,YSCHGEFN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6800 35.529 262.0 671530.0 25 0 64257.0 -1 0 82 785.6138582838427 3138.4263272689705 4 785.8648559451103 MULTI CID FTMS 0 0 0 6794 297681.3125 0.6552026066683211 -1 0.048095703125 6 3 HEQ 3 -1 33.258 0.0 0.0 1.0597 0.0 0.0 2726.255969469324 0.0 2726.255969469324 0.0 1.3194591750836082 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 HEQ 1.0597 - 138 1 2.121 127540.5 1.0 1753 5045 6794 HBL1_DMSO_200M_050219_1,6800 HBL1_DMSO_200M_050219_1,6800, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6801 35.532 166.0 613510.0 25 0 118990.0 28393 PSPHFPSV 8 121 434.21971675448174 0 434.2197448611259 PEAK CID FTMS 0 0 0 6794 255621.53125 0.729908635257564 2 -0.087615966796875 7 Unmodified _PSPHFPSV_ ENSG00000241241|ENST00000440582|KRTAP4-16 13.50788311687929 0.5021269579892848 3 P 1 7 5.4846 0.0 0.0 0.63301 0.0 0.0 157.04379034314474 609.3108614557249 766.3546517988696 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.63301 + + 51 + 1 2.121 83042.1 1.0 1754 5045 6794 HBL1_DMSO_200M_050219_1,6801 HBL1_DMSO_200M_050219_1,6801,PSPHFPSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6802 35.536 219.0 276380.0 25 0 23047.0 + 2221 AQDEERQASL 10 98 573.7719644702559 1145.5293760073116 2 573.7734863162041 MULTI CID FTMS 0 0 0 6794 181080.546875 0.7294782767371552 -2 0.1489219665527343 8 Unmodified _AQDEERQASL_ ENSG00000184575|ENST00000332707|XPOT 44.391923383255 0.1130657680819667 3 [QA]DE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP]S{I|L} 10 2 [QA] + + 33.249 9.4762 4.7597 2.9025 2.9025 50.016 0.0 0.0 0.0 0.0 20.061668675368622 0.0 0.0 0 1.7302046884880935 0.0 0.2302046884880938 0.0 [QA]DE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP]S{I|L} 2.9025 - 217 + 1 2.121 51494.1 1.0 1755 5045 6794 HBL1_DMSO_200M_050219_1,6802 HBL1_DMSO_200M_050219_1,6802,AQDEERQASL True True AQDEERQASL 35.536482 573.773486316204 1290728.25 6794.0 ENSG00000184575|ENST00000332707|XPOT 8.266788641611734 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6803 35.55 800.0 99512.0 25 0 23819.0 -1 0 55 1094.104889644072 3279.292839532416 3 1094.439990222454 MULTI CID FTMS 0 0 0 6794 136994.3125 0.4541191633708684 -2 0.1489219665527343 9 3 E 1 -1 6.9897 0.0 0.0 0.21315 0.0 0.0 2623.064924795452 524.1615694635374 3147.226494258989 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21315 - 11 + 1 2.121 73978.9 0.5 1756 5045 6794 HBL1_DMSO_200M_050219_1,6803 HBL1_DMSO_200M_050219_1,6803, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6804 35.555 229.0 280050.0 25 0 15155.0 + 4214 DAPKDYRQV 9 122 364.5208430808685 1090.5406998428057 3 364.5206481814384 MULTI CID FTMS 0 0 0 6794 123642.0390625 0.4311008904013839 17 -0.5092582702636719 10 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 12.240655878213236 0.5053430591993562 3 {[DA]|[EG]}PKD 5 4 42.703 0.0 0.0 3.9158 0.0 0.0 0.0 561.2791231744749 561.2791231744749 27.30030831572681 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {[DA]|[EG]}PKD 3.9158 + + 50 + 1 2.121 59211.8 1.0 1757 5045 6794 HBL1_DMSO_200M_050219_1,6804 HBL1_DMSO_200M_050219_1,6804,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6806 35.559 33.0 2300300.0 25 0 170180.0 27033 PEPPVNLK 8 94 447.2581928433888 892.5018327535776 2 447.2581359744072 MULTI CID FTMS 0 0 0 6805 1812323.25 0.9212667140434564 2 -0.076171875 1 Unmodified _PEPPVNLK_ ENSG00000008294|ENST00000262013|SPAG9;ENST00000513827.5_1_17:49073859-49079083:-|nuORF;ENST00000514613.5_1_17:49067015-49156972:-|nuORF;ENST00000515685.1_1_17:49075803-49079083:-|nuORF;nc|ENSG00000008294|O60271-2|SPAG9;nc|ENSG00000008294|O60271-3|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-5|SPAG9;nc|ENSG00000008294|O60271-9|SPAG9 24.67388899826682 0.525179942228231 3 [EP]PPV[KQ]V 8 3 + 30.183 0.0 0.0 3.3818 3.3818 81.458 0.0 0.0 0.0 18.76303339656081 3.271791577659229 3.271791577659229 12.972287753157516 0 0.0 1.5228787452803376 0.0 0.75 [EP]PPV[KQ]V;[EP]V{[HG]|PP}[KQ]V;[VP]K[WR][HA];[VP]PK{NN|[MP]|[D{I|L}]|[EV]}[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}{NN|[MP]|[D{I|L}]|[EV]}K{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.3818;1.9284;0.43331;0.21601;0.078796 -;-;-;-;- 154 + 1 2.127 64208.3 1.0 1758 5046 6805 HBL1_DMSO_200M_050219_1,6806 HBL1_DMSO_200M_050219_1,6806,PEPPVNLK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6807 35.561 65.0 1319600.0 25 0 163970.0 + 44858 YPPHVQKV 8 109 323.1837477176532 966.5294137531596 3 323.1832458376884 MULTI CID FTMS 0 0 0 6805 634897.3125 0.8888123301708896 7 -0.1783638000488281 2 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 21.74664581756881 0.5868176546531598 3 YPPHVQKV 8 0 + 55.174 0.0 0.0 5.7084 5.7084 77.698 0.0 0.0 0.0 42.4707226159849 10.004102669245974 10.004102669245974 1.7609125905568137 0 0.0 1.154901959985743 0.0 0.2396518287104437 + + YPPHVQKV;YPPVHQKV;YPVPHQKV;YPPHV[AG]KV;YPPVH[AG]KV;YPVPH[AG]KV;YVPPHQKV;YVPPH[AG]KV;Y[{I|L}T]R{[MG]|[TS]}KV 5.7084;5.5263;5.2148;4.7502;4.568;4.2565;3.7084;2.7502;0.74448 +;-;-;-;-;-;-;-;- + 224 + 1 2.127 75732.8 1.0 1759 5046 6805 HBL1_DMSO_200M_050219_1,6807 HBL1_DMSO_200M_050219_1,6807,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6808 35.563 127.0 691960.0 25 0 64652.0 + 27142 PFPLGTPRL 9 119 333.1979866606353 996.572130582106 3 333.1977416872978 MULTI CID FTMS 0 0 0 6805 544877.0 0.4336615645544504 21 -0.808074951171875 3 Unmodified _PFPLGTPRL_ REV__ENST00000595775.5_1_19:42817488-42818494:+|nuORF 15.847184025352805 0.4077185912009129 3 PR{I|L} 3 -1 25.234 0.0 0.0 2.5321 0.0 0.0 612.3355824690477 0.0 612.3355824690477 0.0 14.749321833847873 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 PR{I|L} 2.5321 + + 270 1 2.127 73931.8 1.0 1760 5046 6805 HBL1_DMSO_200M_050219_1,6808 HBL1_DMSO_200M_050219_1,6808,PFPLGTPRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6809 35.572 512.0 186860.0 25 0 11876.0 + 16470 KAISGVHTV 9 157 456.2689482239657 910.5233435147314 2 456.2684509158134 MULTI CID FTMS 0 0 0 6805 177224.453125 0.0315544649149233 12 -0.3671607971191406 4 Unmodified _KAISGVHTV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 57.72198328787511 0.0273433238377839 3 HTV 3 6 35.896 0.0 0.0 3.9424 0.0 0.0 555.3394642560562 0.0 555.3394642560562 0.0 2.951140161145325 0.0 0.0 0 0.9698565171985376 0.0 0.0 0.0 + HTV 3.9424 + + 328 1 2.127 78232.8 1.0 1761 5046 6805 HBL1_DMSO_200M_050219_1,6809 HBL1_DMSO_200M_050219_1,6809,KAISGVHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6810 35.586 800.0 146360.0 25 0 9690.1 + 41527 VPNPRTSNEV 10 139 556.7882219227976 1111.561890912395 2 556.7883788943291 MULTI CID FTMS 0 0 0 6805 166756.15625 0.8681863977492416 -5 0.4099655151367187 5 Unmodified _VPNPRTSNEV_ ENSG00000100603|ENST00000261531|SNW1 61.60191391372663 0.0323840705564037 3 VPNPVVC(Carbamidomethyl (C))[QT]V 10 5 + 74.871 0.0 0.0 6.7357 6.7357 91.869 0.0 0.0 0.0 33.521825181113634 13.043709860534769 13.043709860534769 13.043709860534769 0 1.4225924581435252 1.6989700043360187 1.5044321917401078 0.6549471895720984 VPNPVVC(Carbamidomethyl (C))[QT]V;VPNPVVC(Carbamidomethyl (C)){[CP]|[EA]}K;{NN|[MP]|[D{I|L}]|[EV]}[NG]RENPVV;V{M(Oxidation (M))|F}VP{I|L}Y[{M(Oxidation (M))|F}E]V;{NN|[MP]|[D{I|L}]|[EV]}[NG]REVNPV;[VP][WR][MN]NPV;{NN|[MP]|[D{I|L}]|[EV]}[NG]RNPEVV;{NN|[MP]|[D{I|L}]|[EV]}[NG]RNEPVV;{NN|[MP]|[D{I|L}]|[EV]}[NG]RENVPV;{[DA]|[EG]}{[NV]|[RG]}RENPVV 6.7357;5.5622;2.1482;1.8635;1.664;1.6426;1.5907;1.5194;1.1006;1.0662 -;-;-;-;-;-;-;-;-;- 647 + 1 2.127 97001.5 0.7799999713897705 1762 5046 6805 HBL1_DMSO_200M_050219_1,6810 HBL1_DMSO_200M_050219_1,6810,VPNPRTSNEV True True VPNPRTSNEV 35.586221 556.788378894329 1682545.375 6805.0 ENSG00000100603|ENST00000261531|SNW1 7.130416552225749 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6811 35.59 196.0 250190.0 25 0 34432.0 + 34895 SQIDQQNSV 9 94 509.74379022071423 1017.4730275082284 2 509.7437316775322 MULTI CID FTMS 0 0 0 6805 157896.203125 0.0272543559040154 6 -0.1525917053222656 6 Unmodified _SQIDQQNSV_ ENSG00000121931|ENST00000369763|LRIF1 16.149105407346934 0.3995459350917656 3 {[QS]|[NT]}{I|L}DQ 5 4 16.466 0.0 0.0 1.6183 0.0 0.0 0.0 443.195048342466 443.195048342466 2.4865124202832334 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 + {[QS]|[NT]}{I|L}DQ 1.6183 + + 186 1 2.127 41524.6 1.0 1763 5046 6805 HBL1_DMSO_200M_050219_1,6811 HBL1_DMSO_200M_050219_1,6811,SQIDQQNSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6813 35.606 800.0 291270.0 25 0 30798.0 + 17721 KPVGFTVHAI 10 171 534.8118392600971 1067.6091255869942 2 534.8117553591728 MULTI CID FTMS 0 0 0 6812 395251.625 0.5746010132889112 -4 0.2365379333496093 1 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 49.93300154707207 0.0805441195901191 3 KPTGAK[WP]A{I|L} 10 5 + 72.859 0.0 0.0 6.8245 6.8245 87.52 0.0 0.0 0.0 42.85387484670329 10.181102750435088 10.181102750435088 6.53212513775344 0 2.2134679910804405 0.0 0.7059771852360797 0.0 KPTGAK[WP]A{I|L};KPTQK[WP]A{I|L};KPTGAK[W{I|L}]AP;KPTQK[W{I|L}]AP;[KP]TQ[WP]AK{I|L};[KP]TQ[WP]KA{I|L};[TP]KQ[WP]AK{I|L};{I|L}{[NV]|[RG]}GAK[WP]A{I|L};[TP]KQ[WP]KA{I|L};[KP]TQ[WP]A{I|L}K 6.8245;6.2127;5.12;4.5081;3.6495;3.4994;3.426;3.3758;3.2759;3.0653 -;-;-;-;-;-;-;-;-;- 1076 + 1 2.127 180344.0 0.699999988079071 1764 5047 6812 HBL1_DMSO_200M_050219_1,6813 HBL1_DMSO_200M_050219_1,6813,KPVGFTVHAI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6814 35.608 112.0 625590.0 25 0 159300.0 2405 AQPSTPVHF 9 79 492.2496197480561 982.4846865629122 2 492.2488281130791 MULTI CID FTMS 0 0 0 6812 324220.53125 0.6119485798506229 -2 0.087615966796875 2 Unmodified _AQPSTPVHF_ ENST00000518820.1_1_8:143620820-143621084:+|nuORF 21.74664581756881 0.2544899275067181 3 [QA]PPP{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 9 4 + 43.197 0.0 0.0 4.3967 4.3967 85.791 0.0 0.0 0.0 40.97804375441612 4.014093602655464 4.014093602655464 26.465912507003605 0 0.75 1.3979400086720375 0.2302046884880938 0.2302046884880938 [QA]PPP{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[QA][YK]{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 4.3967;1.7029 -;- 48 + 1 2.127 60036.5 1.0 1765 5047 6812 HBL1_DMSO_200M_050219_1,6814 HBL1_DMSO_200M_050219_1,6814,AQPSTPVHF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6815 35.613 237.0 388880.0 25 0 50499.0 28889 QAPGPKGTS 9 124 421.7212363858779 841.4279198385558 2 421.7218200564384 MULTI CID FTMS 0 0 0 6812 237487.90625 0.9698958355401714 -1 0.0352783203125 3 Unmodified _QAPGPKGTS_ ENST00000479914.5_1_3:48732551-48732605:-|nuORF 21.74664581756881 0.2544899275067181 3 {[DA]|[EG]}PTS 5 5 39.195 0.0 0.0 4.6581 0.0 0.0 0.0 367.2093447773205 367.2093447773205 22.8734750261858 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[DA]|[EG]}PTS 4.6581 - 235 + 1 2.127 79003.4 1.0 1766 5047 6812 HBL1_DMSO_200M_050219_1,6815 HBL1_DMSO_200M_050219_1,6815,QAPGPKGTS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6816 35.627 800.0 218670.0 25 0 12826.0 7677 EKNQPPSV 8 184 449.7346336103117 897.4547142874234 2 449.7345458865166 MULTI CID FTMS 0 0 0 6812 147557.578125 0.3263729999655783 -7 0.4938850402832031 4 Unmodified _EKNQPPSV_ ENST00000560141.2_1_15:45024324-45024492:+|nuORF 39.957323273325 0.2350051964751539 3 [TA]AQPQ 6 6 51.374 0.0 0.0 5.7244 0.0 0.0 0.0 298.1400256767641 298.1400256767641 28.34741961856788 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 1.325257498915995 0.0 [TA]AQPQ 5.7244 - 686 1 2.127 137610.5 0.6299999952316284 1767 5047 6812 HBL1_DMSO_200M_050219_1,6816 HBL1_DMSO_200M_050219_1,6816,EKNQPPSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6817 35.631 230.0 375130.0 25 0 24776.0 41160 VPARMAEMAR 10 108 377.86368869557697 0 377.8638488650322 PEAK CID FTMS 0 0 0 6812 120288.6328125 0.6856451566791838 -2 0.087615966796875 5 Unmodified _VPARMAEMAR_ ENSG00000167508|ENST00000301012|MVD;ENST00000565149.5_1_16:88718935-88722722:-|nuORF 3.876331618118854 0.3961065659209837 3 {I|L}W 2 10 7.0783 0.0 0.0 0.93913 0.0 0.0 258.4202657194758 193.0989931695922 451.51925888906806 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}W 0.93913 - 26 + 1 2.127 75247.6 1.0 1768 5047 6812 HBL1_DMSO_200M_050219_1,6817 HBL1_DMSO_200M_050219_1,6817,VPARMAEMAR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6819 35.635 94.0 640780.0 25 0 71324.0 28230 PQQGLELGV 9 89 470.758769292244 939.502985651288 2 470.7589599490166 MULTI CID FTMS 0 0 0 6818 438911.34375 0.5211999177964644 3 -0.0725364685058593 1 Unmodified _PQQGLELGV_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 12.531546534597751 0.4974689918368763 3 V 1 8 15.485 0.0 0.0 1.6482 0.0 0.0 822.423546419646 0.0 822.423546419646 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.6482 + + 123 + 1 2.127 50878.1 1.0 1769 5048 6818 HBL1_DMSO_200M_050219_1,6819 HBL1_DMSO_200M_050219_1,6819,PQQGLELGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6820 35.649 800.0 145630.0 25 0 10071.0 -1 0 117 646.3407422792978 645.3334658126978 1 646.3428832888603 MULTI CID FTMS 0 0 0 6818 118963.7109375 0.6654460333532463 -2 0.076171875 2 3 [TA]EQVV 6 -1 + 71.237 0.0 0.0 11.039 11.039 96.724 0.0 0.0 0.0 14.67295166014962 16.197887582883936 14.67295166014962 11.918154769883792 0 1.0941876774005248 1.3979400086720375 0.9417509724019616 0.3252574989159953 [TA]EQVV;[TA]EVQV;[TA]E[AG]VV;[AG]EATVV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATVV;[TA]A{[DA]|[EG]}VV;{[CP]|[EA]}TQVV;{[CP]|[EA]}GATVV;[TA]G{[CP]|[EA]}VV;[TA]EV[AG]V 11.039;9.1919;9.075;8.765;8.4547;7.8899;7.6601;7.592;7.565;7.2282 -;-;-;-;-;-;-;-;-;- 639 1 2.127 89872.5 0.6299999952316284 1770 5048 6818 HBL1_DMSO_200M_050219_1,6820 HBL1_DMSO_200M_050219_1,6820, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6821 35.651 66.0 1155300.0 25 0 229300.0 + 36462 TAAKPAASI 9 97 415.2426684546621 828.4707839761243 2 415.2422973513603 MULTI CID FTMS 0 0 0 6818 591424.75 0.064159887255162 -9 0.6063079833984375 3 Unmodified _TAAKPAASI_ ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207 43.85829265575387 0.0542763391141878 3 [TA]{[QN]|[E{I|L}]|[KN]}[VP]S{I|L} 8 3 + 38.35 0.0 0.0 4.629 4.629 79.049 0.0 0.0 0.0 9.961214824547255 5.199178382953058 5.199178382953058 5.199178382953058 0 1.305462187404089 2.0 0.6421590589602533 0.0 [TA]{[QN]|[E{I|L}]|[KN]}[VP]S{I|L};[TA][PG]AK{I|L}[TA];[TA][QP]K{I|L}[TA];[TA][PG]KA{I|L}[TA];[TA]A[PG]K{I|L}[TA];[TA][PG]K[VG]S{I|L};[TA][K{I|L}][TA][QP];[PA]ASAK{I|L}[TA];[TA]A[TA][K{I|L}][PG];[TA][KA][{I|L}T][QP] 4.629;4.0015;3.5829;3.4772;3.2748;2.9969;2.7462;2.6474;2.4927;2.1464 -;-;-;-;-;-;-;-;-;- 349 + 1 2.127 63486.0 1.0 1771 5048 6818 HBL1_DMSO_200M_050219_1,6821 HBL1_DMSO_200M_050219_1,6821,TAAKPAASI True True TAAKPAASI 35.650698 415.24229735136 47489904.0 6818.0 ENSG00000010244|ENST00000394670|ZNF207;;nc|ENSG00000010244|O43670-3|ZNF207;;nc|ENSG00000010244|O43670-2|ZNF207;;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;;nc|ENSG00000010244|O43670|ZNF207 5.452426910400391 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6822 35.657 344.0 442410.0 25 0 56591.0 + 23470 LTGWPLTMK 9 121 531.784148019364 1061.553743105528 2 531.7844116091728 MULTI CID FTMS 0 0 0 6818 325733.59375 0.1198671638414586 -10 0.6629905700683594 4 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 53.832793166522166 0.0319663582346103 3 TG[NG]P{I|L}T{M(Oxidation (M))|F}K 9 -1 61.491 0.0 0.0 5.7925 0.0 0.0 128.0952625959 0.0 128.0952625959 0.0 42.065891713843925 0.0 0.0 0 2.110924374808178 0.0 1.3882104921644451 0.2396518287104437 TG[NG]P{I|L}T{M(Oxidation (M))|F}K 5.7925 - 1228 1 2.127 121952.1 1.0 1772 5048 6818 HBL1_DMSO_200M_050219_1,6822 HBL1_DMSO_200M_050219_1,6822,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6823 35.66 139.0 381240.0 25 0 29611.0 + 34536 SPAPPPQQV 9 91 460.7452540559853 919.4759551787704 2 460.7444030642509 MULTI CID FTMS 0 0 0 6818 323181.21875 0.6112809475121588 -8 0.5347785949707031 5 Unmodified _SPAPPPQQV_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 65.23502041540118 0.0231836506122253 3 [PS]APPPQQV 9 0 + 57.831 0.0 0.0 6.2896 6.2896 87.205 0.0 0.0 0.0 12.956349637772746 40.50722946573438 12.956349637772746 8.239087409443187 0 1.329689690656103 1.2218487496163564 0.5994850021680094 0.0 + + [PS]APPPQQV;[PS]PAPPQQV;[PS]APPP[AG]QV;[PS]APPG[PA]QV;[PS]PAPP[AG]QV;{[SA]|[TG]}PPPPQQV;[PA]SPPPQQV;[PS]PAPG[PA]QV;{[HG]|PP}SAPPQQV;{[SA]|[TG]}PPPP[AG]QV 6.2896;5.3935;5.2882;4.6334;4.3921;4.3471;4.1701;3.7373;3.3721;3.3456 +;-;-;-;-;-;-;-;-;- + 447 1 2.127 44986.1 1.0 1773 5048 6818 HBL1_DMSO_200M_050219_1,6823 HBL1_DMSO_200M_050219_1,6823,SPAPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6825 35.664 5.6 9246700.0 25 0 674960.0 + 28897 QAPPPPQQV 9 86 481.2587808144996 960.5030086957992 2 481.2588989138603 MULTI CID FTMS 0 0 0 6824 10922664.0 0.8752741275737461 1 -0.014007568359375 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 85.27202061508552 0.0162393975915471 3 [QA]PPPGPAQV 10 2 + 65.373 0.0 0.0 6.8061 6.8061 61.577 0.0 0.0 0.0 11.48185062238838 7.199915470362015 7.199915470362015 0.0 0 1.8494850021680087 1.6989700043360187 0.0 0.5554621874040891 [QA]PPPGPAQV;[QA]PPPPGAQV;[QA]PPGPPAQV;[QA]PPPPQQV;[QA]PGPPPAQV;[QA]PPPPAGQV;[PG]APAPPGAQV;[PG]APAPGPAQV;[QP]APPGPAQV;[QP]APPPGAQV 6.8061;6.8061;6.1541;6.1261;5.2697;5.2497;4.7531;4.7531;4.5905;4.5905 -;-;-;+;-;-;-;-;-;- + 1290 1 2.127 45629.0 1.0 1774 5049 6824 HBL1_DMSO_200M_050219_1,6825 HBL1_DMSO_200M_050219_1,6825,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6826 35.666 112.0 455410.0 25 0 46676.0 -1 0 95 386.55221438697697 2313.269627522262 6 386.7190429568291 MULTI CID FTMS 0 0 0 6824 494311.125 0.2016781689927508 4 -0.0733604431152343 2 3 {[SA]|[TG]}P 3 -1 21.325 0.0 0.0 0.92184 0.0 0.0 0.0 2055.123881022515 2055.123881022515 2.02771224684248 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3252574989159953 0.0 {[SA]|[TG]}P 0.92184 - 69 1 2.127 46544.3 1.0 1775 5049 6824 HBL1_DMSO_200M_050219_1,6826 HBL1_DMSO_200M_050219_1,6826, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6827 35.674 411.0 371160.0 25 0 38947.0 6636 EAVAAVAGPV 10 169 442.2476339812402 882.4807150292804 2 442.2476989626884 MULTI CID FTMS 0 0 0 6824 281490.0 0.522544282386279 3 -0.0475883483886718 3 Unmodified _EAVAAVAGPV_ ENST00000527730.1_3_8:145743395-145745348:+|nuORF 28.486842064014134 0.328649637529545 3 [TA]PP 4 8 37.435 0.0 0.0 4.242 0.0 0.0 0.0 513.2686616208649 513.2686616208649 24.10280412379413 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [TA]PP 4.242 - 355 + 1 2.127 121189.9 1.0 1776 5049 6824 HBL1_DMSO_200M_050219_1,6827 HBL1_DMSO_200M_050219_1,6827,EAVAAVAGPV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6829 35.69 800.0 213900.0 25 0 5614.8 -1 0 105 674.3165486654508 3366.546360994253 5 674.5171996951103 MULTI CID FTMS 0 0 0 6828 277218.71875 0.7962437146914207 -2 0.0428390502929687 1 3 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VE 5 -1 27.369 0.0 0.0 0.81296 0.0 0.0 0.0 2779.242777051115 2779.242777051115 8.440651506171246 0.0 0.0 0.0 0 0.0 0.0 0.6382104921644451 0.6549471895720985 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VE 0.81296 - 430 1 2.127 128984.1 0.8100000023841858 1777 5050 6828 HBL1_DMSO_200M_050219_1,6829 HBL1_DMSO_200M_050219_1,6829, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6830 35.704 800.0 116100.0 25 0 6975.1 -1 0 67 842.3934359687792 3365.5446380087164 4 842.8938476443291 MULTI CID FTMS 0 0 0 6828 74122.6328125 0.5266770325286745 -4 0.1190109252929687 2 3 AR 2 -1 20.969 0.0 0.0 0.62305 0.0 0.0 3120.409195360889 0.0 3120.409195360889 0.0 13.010299956639813 0.0 0.0 0 0.0 0.0 0.0 0.0 AR 0.62305 - 205 1 2.127 71340.9 0.4600000083446502 1778 5050 6828 HBL1_DMSO_200M_050219_1,6830 HBL1_DMSO_200M_050219_1,6830, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6833 35.721 678.0 260080.0 25 0 32074.0 + 45030 ATPYNSRTV 9 188 504.76135640555736 1007.5081598779147 2 504.2634765505791 MULTI CID FTMS 0 0 0 6832 148629.71875 0.7983991899426383 5 -0.1611251831054687 1 Unmodified _YPVQPPGPGP_ ENSG00000131389|ENST00000622186|SLC6A6 10.823927491677226 0.6659270209832991 3 [TA]PY 4 9 26.92 0.0 0.0 2.672 0.0 0.0 0.0 572.2814284160379 572.2814284160379 13.732685170813175 0.0 0.0 0.0 0 0.1861818737241735 0.8860566476931632 0.0 0.0 [TA]PY 2.672 - 335 + 1 2.114 137067.2 1.0 1779 5052 6832 HBL1_DMSO_200M_050219_1,6833 HBL1_DMSO_200M_050219_1,6833,YPVQPPGPGP False False ATPYNSRTV 35.721233 504.263476550579 549050.375 6832.0 ENSG00000131389|ENST00000622186|SLC6A6 2.2313873767852783 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6834 35.733 691.0 203500.0 25 0 32112.0 + 36350 SYPHHATQL 9 142 527.2593360808548 1052.5041192285096 2 527.2601196169853 MULTI CID FTMS 0 0 0 6832 156546.015625 0.0125707592462074 -10 0.4591445922851562 2 Unmodified _SYPHHATQL_ ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 57.72198328787511 0.0273433238377839 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 9 4 + 34.702 0.0 0.0 3.2971 3.2971 72.772 0.0 0.0 0.0 3.010299956639816 3.652792693512417 3.010299956639816 3.010299956639816 0 0.25 0.0 0.7302046884880937 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[QN]|[E{I|L}]|[KN]}EATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[{M(Oxidation (M))|F}C]|[YS]}PHHATQ{I|L};HHPATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[QN]|[E{I|L}]|[KN]}EAT[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HAT[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[QN]|[E{I|L}]|[KN]}EGV[SG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGV[SG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HM]{I|L}Q[RH][MT];HHPAT[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 3.2971;3.011;2.8303;2.725;2.1362;2.0604;1.9689;1.8931;1.8284;1.4884 -;-;+;-;-;-;-;-;-;- + 959 1 2.114 112200.3 1.0 1780 5052 6832 HBL1_DMSO_200M_050219_1,6834 HBL1_DMSO_200M_050219_1,6834,SYPHHATQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6836 35.737 99.0 692610.0 25 0 70851.0 + 17668 KPTGARPSAL 10 73 499.2931313303457 996.5717097274916 2 499.2929565310478 MULTI CID FTMS 0 0 0 6835 568948.9375 0.1839472058085977 28 -1.1623649597167969 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 15.248480904072842 0.5916873121453583 3 KPT 3 7 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3543531024299 667.3543531024299 21.10924374808178 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPT 3.9829 + + 67 + 1 2.114 59578.0 1.0 1781 5053 6835 HBL1_DMSO_200M_050219_1,6836 HBL1_DMSO_200M_050219_1,6836,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6837 35.743 279.0 334860.0 25 0 38249.0 -1 HHCLPWAYPM 10 119 437.863576720333 1310.568900761199 3 437.8632995486259 MULTI CID FTMS 0 0 0 6835 269749.1875 0.7508653200864472 5 -0.1887969970703125 2 Carbamidomethyl (C) _HHC(Carbamidomethyl (C))LPWAYPM_ ENST00000533086.5_1_19:15225833-15226058:-|nuORF 4.189502756095605 0.7072575900373772 3 PM 2 -1 18.188 0.0 0.0 1.3878 0.0 0.0 1064.4654596208893 0.0 1064.4654596208893 0.0 6.197887582883936 0.0 0.0 0 0.5 0.0 0.0 0.0 PM 1.3878 + + 31 1 2.114 77153.4 1.0 1782 5053 6835 HBL1_DMSO_200M_050219_1,6837 HBL1_DMSO_200M_050219_1,6837,HHCLPWAYPM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6838 35.75 389.0 340910.0 25 0 21272.0 36337 SYNSQRWL 8 175 351.84198331046446 1052.5041205315931 3 352.1753723025322 MULTI CID FTMS 0 0 0 6835 231864.4375 0.0661168358740701 -8 0.2307014465332031 3 Unmodified _SYNSQRWL_ ENSG00000083097|ENST00000349129|DOP1A 5.760428011301431 0.7893668129297577 3 {I|L} 1 7 11.594 0.0 0.0 1.1015 0.0 0.0 921.409041041162 0.0 921.409041041162 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1015 + + 178 + 1 2.114 108940.9 1.0 1783 5053 6835 HBL1_DMSO_200M_050219_1,6838 HBL1_DMSO_200M_050219_1,6838,SYNSQRWL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6839 35.763 800.0 76813.0 25 0 6308.8 + -1 GVGAAGVV 8 79 628.6921921431754 3138.4245783828765 5 629.0928222537041 MULTI CID FTMS 0 0 0 6835 58782.234375 0.0613485876656636 6 -0.1987190246582031 4 ENSG00000068308|ENST00000376488|OTUD5;nc|ENSG00000068308|Q96G74-3|OTUD5;nc|ENSG00000068308|Q96G74|OTUD5;nc|ENSG00000068308|Q96G74-2|OTUD5 3 VQ 2 -1 22.351 0.0 0.0 0.71218 0.0 0.0 2627.149017935414 281.1257723443969 2908.274790279811 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.7134679910804405 VQ 0.71218 - 177 + 1 2.114 52062.9 0.959999978542328 1784 5053 6835 HBL1_DMSO_200M_050219_1,6839 HBL1_DMSO_200M_050219_1,6839, False False GVGAAGVV 35.763393 629.092822253704 191102.46875 6835.0 ENSG00000068308|ENST00000376488|OTUD5;;nc|ENSG00000068308|Q96G74-3|OTUD5;;nc|ENSG00000068308|Q96G74|OTUD5;;nc|ENSG00000068308|Q96G74-2|OTUD5 0.984240214029948 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6841 35.779 800.0 57204.0 25 0 6360.7 -1 TCCCPSCCQT 10 86 610.1845545244362 0 609.7556640505791 PEAK CID FTMS 0 0 0 6840 41678.5859375 0.9441662654370176 -1 0.030059814453125 1 3 Carbamidomethyl (C) _TC(Carbamidomethyl (C))CCPSC(Carbamidomethyl (C))C(Carbamidomethyl (C))QT_ ENSG00000204880|ENST00000333822|KRTAP4-8 1.3295316138638542 0.3961065659209837 3 E 1 -1 4.6041 0.0 0.0 0.37789 0.0 0.0 349.987015687741 736.2811373346311 1086.2681530223722 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.37789 - 3 + 1 2.114 40341.3 0.7099999785423279 1785 5054 6840 HBL1_DMSO_200M_050219_1,6841 HBL1_DMSO_200M_050219_1,6841,TCCCPSCCQT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6842 35.791 712.0 337570.0 25 0 19656.0 + 28886 QAPAVIRQ 8 174 441.7614654262716 881.5083779193432 2 441.7610351443291 MULTI CID FTMS 0 0 0 6840 265636.125 0.8134201429990138 -4 0.0894126892089843 2 Unmodified _QAPAVIRQ_ ENSG00000254585|ENST00000650528|MAGEL2 30.22481116460888 0.4082965392918993 3 [QA]PAV 5 3 36.184 0.0 0.0 4.1048 0.0 0.0 0.0 412.2327783921816 412.2327783921816 19.106056125004827 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 + [QA]PAV 4.1048 + + 603 + 1 2.114 185471.2 1.0 1786 5054 6840 HBL1_DMSO_200M_050219_1,6842 HBL1_DMSO_200M_050219_1,6842,QAPAVIRQ False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6844 35.796 75.0 549960.0 25 0 78593.0 + 29761 QPQGSFAAPAI 11 69 543.7803286566087 1085.5461043800174 2 543.7806884646416 MULTI CID FTMS 0 0 0 6843 558531.0625 0.3505344961519446 7 -0.2204475402832031 1 Unmodified _QPQGSFAAPAI_ REV__ENSG00000175727|ENST00000319080|MLXIP;REV__ENST00000541750.1_12:122618368-122620257:+|nuORF;REV__nc|ENSG00000175727|Q9HAP2-2|MLXIP;REV__nc|ENSG00000175727|Q9HAP2-4|MLXIP 13.042465956692816 0.7638483625850725 3 [QP]QD 4 -1 23.94 0.0 0.0 2.2054 0.0 0.0 0.0 614.3288229404054 614.3288229404054 8.455612550363796 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 [QP]QD 2.2054 - 80 + 1 2.089 36962.6 1.0 1787 5055 6843 HBL1_DMSO_200M_050219_1,6844 HBL1_DMSO_200M_050219_1,6844,QPQGSFAAPAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6845 35.81 800.0 19216.0 25 0 3225.3 -1 0 25 1094.104889644072 3279.292839532416 3 1095.108325183392 MULTI CID FTMS 0 0 0 6843 59138.9296875 0.2099506654489733 7 -0.2204475402832031 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.089 20862.0 0.6100000143051147 1788 5055 6843 HBL1_DMSO_200M_050219_1,6845 HBL1_DMSO_200M_050219_1,6845, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6846 35.821 601.0 437160.0 25 0 37920.0 + 39452 AVPYPQRD 8 170 473.2430224839704 944.4714920347408 2 473.2433349490166 MULTI CID FTMS 0 0 0 6843 272798.4375 0.5707892283839542 -5 0.117462158203125 3 Unmodified _VAPHPVYY_ P02666 17.086550045450526 0.6584923310065985 3 {[VA]|[{I|L}G]}PYD 5 4 39.253 0.0 0.0 4.156 0.0 0.0 0.0 396.2011202447876 396.2011202447876 27.658715643802765 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}PYD 4.156 - 264 + 1 2.089 201374.5 1.0 1789 5055 6843 HBL1_DMSO_200M_050219_1,6846 HBL1_DMSO_200M_050219_1,6846,VAPHPVYY False False AVPYPQRD 35.82077 473.243334949017 2405066.75 6843.0 P02666 1.5213683048884077 2.0 False 8.0 True unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6847 35.826 265.0 263220.0 25 0 11495.0 -1 0 111 334.1519279587749 333.1446514921749 1 333.8234741091728 MULTI CID FTMS 0 0 0 -1 0 4 3 {I|L} 1 -1 12.764 0.0 0.0 3.8314 0.0 0.0 202.04935837869675 0.0 202.04935837869675 0.0 1.654966095207122 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.8314 - 19 + 1 2.089 62015.0 1.0 1790 5055 6843 HBL1_DMSO_200M_050219_1,6847 HBL1_DMSO_200M_050219_1,6847, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6848 35.827 67.0 1090500.0 25 0 99294.0 + 20560 LLMVFFVV 8 93 323.1947528561414 966.5624291686242 3 323.1935607790947 MULTI CID FTMS 0 0 0 6843 264884.0 0.9328977023717204 -1 0.0280494689941406 5 Unmodified _LLMVFFVV_ REV__ENSG00000103546|ENST00000568943|SLC6A2;REV__nc|ENSG00000103546|P23975-2|SLC6A2;REV__nc|ENSG00000103546|P23975-3|SLC6A2 6.354104778181461 0.7857632046190106 3 DD 2 -1 17.514 0.0 0.0 1.812 0.0 0.0 718.4971043168649 0.0 718.4971043168649 0.0 4.7495954224104295 0.0 0.0 0 0.0 0.0 0.4326217639455209 0.0 DD 1.812 - 42 + 1 2.089 61800.8 1.0 1791 5055 6843 HBL1_DMSO_200M_050219_1,6848 HBL1_DMSO_200M_050219_1,6848,LLMVFFVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6849 35.84 737.0 173900.0 25 0 5577.3 -1 0 90 674.3165486654508 3366.546360994253 5 674.3173705935478 MULTI CID FTMS 0 0 0 6843 108013.6640625 0.3102431231857651 3 -0.1306877136230468 6 3 TG{M(Oxidation (M))|F}H 4 -1 16.542 0.0 0.0 0.49137 0.0 0.0 1578.711544755944 1342.6176654596347 2921.3292102155788 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TG{M(Oxidation (M))|F}H 0.49137 - 119 + 1 2.089 99036.0 1.0 1792 5055 6843 HBL1_DMSO_200M_050219_1,6849 HBL1_DMSO_200M_050219_1,6849, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6850 35.853 744.0 256570.0 25 0 46356.0 20118 LKGNHFDIVI 10 131 578.3308289000456 0 578.3317748904228 PEAK CID FTMS 0 0 0 6843 199865.875 0.8206690233535009 -2 0.0581092834472656 7 Unmodified _LKGNHFDIVI_ ENSG00000129317|ENST00000344862|PUS7L;nc|ENSG00000129317|Q9H0K6-2|PUS7L 14.838274106304384 0.3381107837965078 3 P{M(Oxidation (M))|F}NG{I|L} 5 8 22.945 0.0 0.0 1.9872 0.0 0.0 498.2595449077099 125.07253442935782 623.3320793370677 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6747425010840047 P{M(Oxidation (M))|F}NG{I|L} 1.9872 - 145 + 1 2.089 144656.2 1.0 1793 5055 6843 HBL1_DMSO_200M_050219_1,6850 HBL1_DMSO_200M_050219_1,6850,LKGNHFDIVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6852 35.863 480.0 314860.0 25 0 20116.0 17722 KPVGFTVHAI 10 145 534.8118392600971 1067.6091255869942 2 534.8119384646416 MULTI CID FTMS 0 0 0 6851 187400.234375 0.2724349699067131 5 -0.1292648315429687 1 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 26.88365393820708 0.3646707531412818 3 KPT 3 7 34.495 0.0 0.0 3.231 0.0 0.0 0.0 738.3907856270163 738.3907856270163 19.317496819840656 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3252574989159953 0.0 KPT 3.231 - 1631 + 1 2.089 116630.0 1.0 1794 5056 6851 HBL1_DMSO_200M_050219_1,6852 HBL1_DMSO_200M_050219_1,6852,KPVGFTVHAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6853 35.867 171.0 455570.0 25 0 28082.0 + 24881 MPNKHNVEV 9 113 534.269196160212 1066.523839387224 2 534.2693359255791 MULTI CID FTMS 0 0 0 6851 497480.4375 0.6543622812064778 -4 0.1453475952148437 2 Unmodified _MPNKHNVEV_ ENSG00000103342|ENST00000434724|GSPT1;ENSG00000189369|ENST00000340438|GSPT2;nc|ENSG00000103342|P15170-2|GSPT1;nc|ENSG00000103342|P15170|GSPT1 49.52724829834842 0.0414064571532091 3 MPNKHNVEV 9 0 + 57.14 0.0 0.0 5.3576 5.3576 83.937 0.0 0.0 0.0 16.686234814255407 7.882050128983522 7.882050128983522 7.882050128983522 0 1.7765096520516426 1.5228787452803376 0.8494850021680094 0.0 + + MPNKHNVEV;MPNKHNVD{I|L};MPGGKHNVEV;[KP]N[HN]VEMV;MPGGKHNVD{I|L};[KP]N[HN]VMEV;[NP]K[HN]VEMV;VYDV[TA][TA]EV;[KP]GG[HN]VEMV;[KP]N[HN]MVEV 5.3576;4.6186;4.4943;3.7931;3.7552;3.5336;3.1377;2.9732;2.9297;2.9236 +;-;-;-;-;-;-;-;-;- + 1085 + 1 2.089 63667.1 1.0 1795 5056 6851 HBL1_DMSO_200M_050219_1,6853 HBL1_DMSO_200M_050219_1,6853,MPNKHNVEV True True MPNKHNVEV 35.866644 534.269335925579 4000986.5 6851.0 nc|ENSG00000103342|P15170-2|GSPT1;;ENSG00000189369|ENST00000340438|GSPT2;;nc|ENSG00000103342|P15170|GSPT1;;ENSG00000103342|ENST00000434724|GSPT1 5.63476578394572 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6854 35.869 97.0 1077900.0 25 0 96600.0 + 44859 YPPHVQKV 8 125 323.1837477176532 966.5294137531596 3 323.1837951540947 MULTI CID FTMS 0 0 0 6851 379405.3125 0.5311411991247632 17 -0.8983001708984375 3 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 30.22481116460888 0.4082965392918993 3 YPPH{[QV]|[N{I|L}]|[RA]|[KV]}KV 8 0 + 42.401 0.0 0.0 4.3869 4.3869 86.235 0.0 0.0 0.0 28.984484532805155 3.9575093733716216 3.9575093733716216 38.57840941039746 0 0.0 1.3010299956639813 0.0 0.3807196863200844 + + YPPH{[QV]|[N{I|L}]|[RA]|[KV]}KV;YV[MT]{[QV]|[N{I|L}]|[RA]|[KV]}KV 4.3869;0.39548 +;- + 149 + 1 2.089 87711.5 1.0 1796 5056 6851 HBL1_DMSO_200M_050219_1,6854 HBL1_DMSO_200M_050219_1,6854,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6856 35.875 181.0 318120.0 25 0 24154.0 7678 EKNQPPSV 8 93 449.7346336103117 897.4547142874234 2 449.7349426150322 MULTI CID FTMS 0 0 0 6855 368320.40625 0.8146639262032347 3 -0.0703887939453125 1 Unmodified _EKNQPPSV_ ENST00000560141.2_1_15:45024324-45024492:+|nuORF 39.957323273325 0.2350051964751539 3 [TA]AQ 4 7 41.159 0.0 0.0 4.5862 0.0 0.0 0.0 523.2503775559721 523.2503775559721 16.46082806091883 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.8494850021680094 0.0 [TA]AQ 4.5862 - 257 1 2.034 52652.8 1.0 1797 5057 6855 HBL1_DMSO_200M_050219_1,6856 HBL1_DMSO_200M_050219_1,6856,EKNQPPSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6857 35.879 189.0 418920.0 25 0 46529.0 22313 LPSGRATMSC 10 81 511.741670371484 1021.468787809768 2 511.7425414919853 MULTI CID FTMS 0 0 0 6855 531769.25 0.1052674582506161 -6 0.165008544921875 2 Unmodified _LPSGRATMSC_ ENST00000399767.5_1_22:18226574-18257190:-|nuORF 36.506200033944 0.1944608063770638 3 {I|L}PSSAAR 7 6 83.62 0.0 0.0 8.1863 0.0 0.0 0.0 336.0706881158813 336.0706881158813 54.19669819961143 0.0 0.0 0.0 0 0.8807196863200843 2.0 1.1861818737241734 0.0 {I|L}PSSAAR 8.1863 - 187 + 1 2.034 74350.2 1.0 1798 5057 6855 HBL1_DMSO_200M_050219_1,6857 HBL1_DMSO_200M_050219_1,6857,LPSGRATMSC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6858 35.89 646.0 145300.0 25 0 36873.0 -1 0 45 1113.136039299675 3336.386288499225 3 1113.471972644329 MULTI CID FTMS 0 0 0 6855 358269.1875 0.9332071433083254 -5 0.1611251831054687 3 3 E 1 -1 6.9897 0.0 0.0 0.2095 0.0 0.0 2680.156170850359 524.1615084283811 3204.3176792787403 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.2095 - 7 + 1 2.034 86270.0 1.0 1799 5057 6855 HBL1_DMSO_200M_050219_1,6858 HBL1_DMSO_200M_050219_1,6858, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6859 35.9 577.0 168960.0 25 0 15953.0 -1 QEWMLSLCYF 10 78 668.2889694772258 0 668.2884399294853 PEAK CID FTMS 0 0 0 6855 282593.375 0.8433369253459779 -4 0.1353530883789062 4 Oxidation (M) _QEWM(Oxidation (M))LSLCYF_ ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA 26.88365393820708 0.2428278298207118 3 {M(Oxidation (M))|F}SSAT 5 -1 36.273 0.0 0.0 2.718 0.0 0.0 685.2918604069768 153.03106104068596 838.3229214476627 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7856668758921828 0.0 {M(Oxidation (M))|F}SSAT 2.718 - 194 + 1 2.034 78452.9 1.0 1800 5057 6855 HBL1_DMSO_200M_050219_1,6859 HBL1_DMSO_200M_050219_1,6859,QEWMLSLCYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6860 35.912 634.0 261980.0 25 0 17567.0 -1 IPKMKKLIR 9 167 381.58655774864303 1141.7378438461292 3 381.5868102908134 MULTI CID FTMS 0 0 0 6855 230541.859375 0.8191359085683425 -1 0.015777587890625 5 Oxidation (M) _IPKM(Oxidation (M))KKLIR_ ENSG00000131620|ENST00000355303|ANO1;nc|ENSG00000131620|Q5XXA6-2|ANO1;nc|ENSG00000131620|Q5XXA6-4|ANO1;nc|ENSG00000131620|Q5XXA6-5|ANO1 2.282774691075616 0.8349936567342158 3 K{I|L}KKPE 6 -1 36.375 0.0 0.0 3.1859 0.0 0.0 400.2798023908219 0.0 400.2798023908219 0.0 21.91122510072759 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}KKPE 3.1859 - 84 1 2.034 134529.8 1.0 1801 5057 6855 HBL1_DMSO_200M_050219_1,6860 HBL1_DMSO_200M_050219_1,6860,IPKMKKLIR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6861 35.922 610.0 266360.0 25 0 43661.0 28924 QAQPGQQQV 9 150 492.2496197480561 982.4846865629122 2 492.7504455447197 MULTI CID FTMS 0 0 0 6855 225720.140625 0.6388200589500899 7 -0.3474235534667969 6 Unmodified _QAQPGQQQV_ ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2;nc|ENSG00000055917|Q8TB72|PUM2 21.74664581756881 0.2544899275067181 3 [QA]PWQTGPV 9 5 + 53.919 0.0 0.0 5.488 5.488 86.067 0.0 0.0 0.0 16.18469229722897 35.35026105512089 16.18469229722897 9.208187539523747 0 1.0 1.5228787452803376 0.3054621874040891 0.7887254899964358 [QA]PWQTGPV;[QA]PW[AG]TGPV;[QA]PWQEKP;[QA]PWEQKP;[PG]AAWQTGPV;[QP]AWQTGPV;[QA]PAA{[WS]|[C(Carbamidomethyl (C)){I|L}]}GPV;[QA]PP[NP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V;[QA]PW[AG]EKP;[QA]PD[QA]T[RP] 5.488;4.5507;3.7487;3.4423;3.1154;3.0546;3.0292;2.9755;2.8059;2.7649 -;-;-;-;-;-;-;-;-;- 1308 1 2.034 125631.0 1.0 1802 5057 6855 HBL1_DMSO_200M_050219_1,6861 HBL1_DMSO_200M_050219_1,6861,QAQPGQQQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6863 35.926 9.4 4015000.0 25 0 471470.0 + 36463 TAAKPAASI 9 65 415.2426684546621 828.4707839761243 2 415.2424499392509 MULTI CID FTMS 0 0 0 6862 5989274.5 0.649738071766893 1 -0.0099220275878906 1 Unmodified _TAAKPAASI_ ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207 36.12702656103203 0.0967173616627612 3 [TA][KA][PA]AS{I|L} 9 0 + 48.521 0.0 0.0 5.8567 5.8567 90.665 0.0 0.0 0.0 34.25449880464388 14.09256854528806 14.09256854528806 25.670240868276576 0 0.7059771852360797 2.0 0.6109243748081782 0.0 + + [TA][KA][PA]AS{I|L};[TA][PG]K[VG]S{I|L};{[TV]|[{I|L}S]}{[QS]|[NT]}[K{I|L}][PG];[PA]ASK[VG]S{I|L} 5.8567;2.7582;0.81221;0.43347 +;-;-;- + 87 + 1 2.034 38256.3 1.0 1803 5058 6862 HBL1_DMSO_200M_050219_1,6863 HBL1_DMSO_200M_050219_1,6863,TAAKPAASI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6864 35.927 8.6 4490000.0 25 0 312830.0 + 28898 QAPPPPQQV 9 74 481.2587808144996 960.5030086957992 2 481.2587768435478 MULTI CID FTMS 0 0 0 6862 6865443.0 0.5501537566506012 10 -0.5024032592773438 2 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 61.357469665136826 0.0253304979873734 3 [QA]PPPPGAQV 10 2 + 66.06 0.0 0.0 6.8777 6.8777 87.689 0.0 0.0 0.0 12.519563343779891 8.819459175083615 8.819459175083615 6.532125137753447 0 0.9802046884880938 1.5228787452803376 0.0 0.8633643341304673 [QA]PPPPGAQV;[QA]PPPPQQV;[QP]APPPGAQV;[QP]PAPPGAQV;[QA]PPG{[HG]|PP}AQV;[QP]APPPQQV;[QP]PAPPQQV;[PG]APAPPGAQV;{[HG]|PP}QAPPGAQV;[QP]PPPAGAQV 6.8777;6.1976;5.5742;5.5238;5.2389;4.8942;4.8437;4.7425;4.6788;4.5344 -;+;-;-;-;-;-;-;-;- + 630 1 2.034 35174.6 1.0 1804 5058 6862 HBL1_DMSO_200M_050219_1,6864 HBL1_DMSO_200M_050219_1,6864,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6865 35.929 25.0 2001200.0 25 0 269470.0 + -1 LTGWPLTMK 9 70 531.784148019364 1061.553743105528 2 531.7842895388603 MULTI CID FTMS 0 0 0 6862 2717454.75 1.0 0 0.0 3 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 34.40172386719151 0.1061884637610825 3 [KT]T{[TV]|[{I|L}S]}HTTK 9 -1 45.398 0.0 0.0 4.2765 0.0 0.0 0.0 60.97299095121937 60.97299095121937 28.293578219013824 0.0 0.0 0.0 0 1.0 0.0 1.2302046884880935 0.3252574989159953 [KT]T{[TV]|[{I|L}S]}HTTK 4.2765 - 207 1 2.034 42213.5 1.0 1805 5058 6862 HBL1_DMSO_200M_050219_1,6865 HBL1_DMSO_200M_050219_1,6865,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6866 35.932 179.0 425200.0 25 0 117690.0 + + 2637 SAYDQKNI 8 94 469.7321460235213 0 469.7319213747978 PEAK CID FTMS 0 0 0 6862 448145.59375 1.0 0 0.0 4 Unmodified _ASYDQQKV_ ENSG00000198176|ENST00000375370|TFDP1;nc|ENSG00000114126|Q14188-4|TFDP2;nc|ENSG00000114126|Q14188-7|TFDP2;nc|ENSG00000114126|Q14188-6|TFDP2;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;nc|ENSG00000114126|Q14188-2|TFDP2;nc|ENSG00000198176|Q14186-2|TFDP1;nc|ENSG00000114126|Q14188-8|TFDP2;ENSG00000114126|ENST00000489671|TFDP2;ENST00000544902.5_1_13:114277566-114294579:+|nuORF 23.1484247019978 0.3584660196589264 3 {M(Oxidation (M))|F}G 2 -1 9.068 0.0 0.0 0.96731 0.0 0.0 321.13005024841124 409.2035616510376 730.3336118994488 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.96731 - 101 + 1 2.034 62657.8 1.0 1806 5058 6862 HBL1_DMSO_200M_050219_1,6866 HBL1_DMSO_200M_050219_1,6866,ASYDQQKV False False SAYDQKNI 35.932086 469.731921374798 1932246.875 6862.0 ENSG00000198176|ENST00000375370|TFDP1;;nc|ENSG00000114126|Q14188-4|TFDP2;;nc|ENSG00000114126|Q14188-7|TFDP2;;nc|ENSG00000114126|Q14188-6|TFDP2;;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;;nc|ENSG00000114126|Q14188-2|TFDP2;;nc|ENSG00000198176|Q14186-2|TFDP1;;nc|ENSG00000114126|Q14188-8|TFDP2;;ENSG00000114126|ENST00000489671|TFDP2;;ENST00000544902.5_1_13:114277566-114294579:+|nuORF 3.9335824648539215 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6868 35.939 278.0 89978.0 25 0 22700.0 -1 0 23 1113.136039299675 3336.386288499225 3 1114.140063464642 MULTI CID FTMS 0 0 0 6867 228424.09375 0.8787524541293751 1 -0.0070228576660156 1 3 E{[MS]|[{M(Oxidation (M))|F}A]} 3 -1 5.6864 0.0 0.0 0.17043 0.0 0.0 2971.25323761475 0.0 2971.25323761475 0.0 5.686362358410124 0.0 0.0 0 0.0 0.0 0.0 0.0 E{[MS]|[{M(Oxidation (M))|F}A]} 0.17043 - 3 + 1 2.034 33852.2 1.0 1807 5059 6867 HBL1_DMSO_200M_050219_1,6868 HBL1_DMSO_200M_050219_1,6868, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6870 35.955 641.0 327520.0 25 0 64022.0 22271 LPRREPTV 8 154 484.2883642792176 966.5621756252352 2 484.2881042361259 MULTI CID FTMS 0 0 0 6869 198239.890625 0.8820878097563275 -3 0.0703887939453125 1 Unmodified _LPRREPTV_ ENSG00000184967|ENST00000330579|NOC4L;ENST00000535343.5_1_12:132632219-132636084:+|nuORF 24.020572477871973 0.5389365498350341 3 {I|L}{M(Oxidation (M))|F}PHVQKV 8 6 + 29.53 0.0 0.0 3.0551 3.0551 75.032 0.0 0.0 0.0 9.823609937054066 5.2827377716704405 5.2827377716704405 5.2827377716704405 0 0.0 0.0 0.0 0.7059771852360797 {I|L}{M(Oxidation (M))|F}PHVQKV;{I|L}{M(Oxidation (M))|F}PHVQVK;{I|L}{M(Oxidation (M))|F}PHV[AG]KV;{I|L}{M(Oxidation (M))|F}PHV[AG]VK;{I|L}{M(Oxidation (M))|F}PHV[K{I|L}]N;VM{I|L}[H{I|L}]QKV;{I|L}{[ET]|[MV]}[H{I|L}]QKV;{I|L}{M(Oxidation (M))|F}PHKK[TP];VM{I|L}[H{I|L}]QVK;{I|L}{[ET]|[MV]}[H{I|L}]QVK 3.0551;2.5086;2.0969;1.5503;1.3045;1.2321;0.91469;0.77179;0.68556;0.36814 -;-;-;-;-;-;-;-;-;- 439 + 1 1.988 166271.5 1.0 1808 5060 6869 HBL1_DMSO_200M_050219_1,6870 HBL1_DMSO_200M_050219_1,6870,LPRREPTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6871 35.968 784.0 142780.0 25 0 13947.0 + -1 GVSALHCTSC 10 124 546.2327349707128 1090.4509170082256 2 546.7347900271416 MULTI CID FTMS 0 0 0 6869 117993.640625 1.0 0 0.0 2 2 Carbamidomethyl (C) _GVSALHC(Carbamidomethyl (C))TSC(Carbamidomethyl (C))_ REV__ENST00000528511.6_2_11:71595487-71639632:-|nuORF;REV__ENST00000529844.5_2_11:71634518-71639632:-|nuORF;REV__ENST00000533047.5_2_11:71634518-71639632:-|nuORF 6.723162845929126 0.6955379296933136 3 [PA]R 3 -1 16.911 0.0 0.0 1.5508 0.0 0.0 0.0 763.2354988776193 763.2354988776193 2.3071313309657207 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [PA]R 1.5508 - 133 1 1.988 89778.0 1.0 1809 5060 6869 HBL1_DMSO_200M_050219_1,6871 HBL1_DMSO_200M_050219_1,6871,GVSALHCTSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6872 35.982 800.0 155850.0 25 0 12213.0 -1 EAEETMECL 9 174 548.7127637145758 1095.4109744959517 2 549.2134887576103 MULTI CID FTMS 0 0 0 6869 80898.1015625 0.4857113949539091 -3 0.0703887939453125 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))EAEETMECL_ ENSG00000172262|ENST00000682664|ZNF131;nc|ENSG00000172262|P52739-2|ZNF131 18.13498045792455 0.3457906370836843 3 NAYA{I|L} 5 -1 31.96 0.0 0.0 2.9177 0.0 0.0 545.1373158185562 0.0 545.1373158185562 0.0 -2.0241012652334867 -2.0241012652334867 0.0 0 0.3807196863200844 0.0 0.0 0.9392404878284264 NAYA{I|L} 2.9177 - 410 1 1.988 96664.5 0.959999978542328 1810 5060 6869 HBL1_DMSO_200M_050219_1,6872 HBL1_DMSO_200M_050219_1,6872,EAEETMECL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6874 35.986 4.5 9168800.0 25 0 1967500.0 + 36351 SYPHHATQL 9 63 527.2593360808548 1052.5041192285096 2 527.2595092654228 MULTI CID FTMS 0 0 0 6873 11661386.0 0.9364178021256728 -1 0.0430984497070312 1 Unmodified _SYPHHATQL_ ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 29.081581746732265 0.1611639662936252 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ 6 3 27.44 0.0 0.0 2.6071 0.0 0.0 0.0 378.167857631868 378.167857631868 6.994784489444967 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ 2.6071 + + 144 1 1.988 37972.4 1.0 1811 5061 6873 HBL1_DMSO_200M_050219_1,6874 HBL1_DMSO_200M_050219_1,6874,SYPHHATQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6875 35.989 113.0 881680.0 25 0 108790.0 38251 TPVPLRAR 8 92 303.85899465487097 0 303.8589660525322 PEAK CID FTMS 0 0 0 6873 489495.6875 0.0804172942734578 -3 0.0600433349609375 2 Unmodified _TPVPLRAR_ ENST00000534035.1_1_11:44102597-44105415:+|nuORF 18.13498045792455 0.4501116112875982 3 T 1 7 6.528 0.0 0.0 1.0778 0.0 0.0 435.5975384046654 66.03576074771718 501.63329915238256 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1923877696554315 0.0 + T 1.0778 + + 6 + 1 1.988 86273.1 1.0 1812 5061 6873 HBL1_DMSO_200M_050219_1,6875 HBL1_DMSO_200M_050219_1,6875,TPVPLRAR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6876 35.999 597.0 130410.0 25 0 11880.0 -1 0 80 603.0804920545687 3010.366077939844 5 603.2809326052666 MULTI CID FTMS 0 0 0 6873 300605.1875 1.0 0 0.0 3 3 NTGPW 5 -1 34.821 0.0 0.0 1.1567 0.0 0.0 1447.6675806949547 1004.481088506506 2452.148669201461 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 NTGPW 1.1567 - 129 + 1 1.988 64646.4 1.0 1813 5061 6873 HBL1_DMSO_200M_050219_1,6876 HBL1_DMSO_200M_050219_1,6876, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6877 36.012 715.0 266420.0 25 0 55031.0 + 43819 YFEDRRPSA 9 138 570.7750205546147 1139.5354881760293 2 570.7747680544853 MULTI CID FTMS 0 0 0 6873 194875.21875 0.1861074301845738 -3 0.0600433349609375 4 Unmodified _YFEDRRPSA_ ENSG00000135821|ENST00000331872|GLUL 55.50274090549119 0.0285720310785888 3 Y{M(Oxidation (M))|F}EDRR[PG]T 9 2 + 49.261 0.0 0.0 4.3229 4.3229 77.989 0.0 0.0 0.0 18.64007808576609 5.070071809000609 5.070071809000609 5.070071809000609 0 1.079689690656103 0.0 0.2059771852360797 1.2302046884880935 Y{M(Oxidation (M))|F}EDRR[PG]T;Y{M(Oxidation (M))|F}EDRRT[PG];A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}RT[PG];AHHA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}RT[PG];{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WK][WH][NP];{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WK][WH]G[PG];[TA]TR{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T[EP]A;[TA]TR{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQA 4.3229;3.878;0.90738;0.64321;0.41323;0.27263;0.27047;0.0063041 -;-;-;-;-;-;-;- 421 + 1 1.988 146190.5 1.0 1814 5061 6873 HBL1_DMSO_200M_050219_1,6877 HBL1_DMSO_200M_050219_1,6877,YFEDRRPSA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6879 36.016 13.0 3727500.0 25 0 617800.0 + 6630 EATIEQSYL 9 80 351.84198331046446 1052.5041205315931 3 351.8417846560478 MULTI CID FTMS 0 0 0 6878 5342039.5 0.9272318446066732 1 -0.0819740295410156 1 Unmodified _EATIEQSYL_ REV__ENSG00000159210|ENST00000502492|SNF8;REV__ENST00000509989.5_1_17:47007839-47014253:-|nuORF;REV__ENST00000514089.5_1_17:47007839-47013524:-|nuORF;REV__nc|ENSG00000159210|Q96H20-2|SNF8 11.640296217721598 0.521594087909532 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ 6 -1 23.237 0.0 0.0 2.2078 0.0 0.0 0.0 378.16864624864337 378.16864624864337 10.138050198288012 0.0 0.0 0.0 0 0.0 0.0 0.5 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ 2.2078 - 207 1 1.988 44668.2 1.0 1815 5062 6878 HBL1_DMSO_200M_050219_1,6879 HBL1_DMSO_200M_050219_1,6879,EATIEQSYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6880 36.025 503.0 444770.0 25 0 53511.0 + 17669 KPTGARPSAL 10 132 499.2932179913806 996.5718830495612 2 499.2932922244072 MULTI CID FTMS 0 0 0 6878 364479.15625 0.1082608916648232 -8 0.2484970092773437 2 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 40.72490554402381 0.149912226101682 3 KPTGA 5 5 54.728 0.0 0.0 5.4916 0.0 0.0 0.0 539.2940157525999 539.2940157525999 33.9755409084696 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.75 0.0 + KPTGA 5.4916 + + 385 + 1 1.988 172456.7 1.0 1816 5062 6878 HBL1_DMSO_200M_050219_1,6880 HBL1_DMSO_200M_050219_1,6880,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6881 36.027 114.0 1253500.0 25 0 143970.0 + 8161 EPPPVKQV 8 111 447.2581928433888 892.5018327535776 2 447.2581054568291 MULTI CID FTMS 0 0 0 6878 817450.9375 0.4155386402962981 18 -0.8605384826660156 3 Unmodified _EPPPVKQV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 38.15118350030904 0.2652218139009398 3 [EP]P[VP]KQV 8 0 + 32.476 0.0 0.0 3.6387 3.6387 81.82 0.0 0.0 0.0 20.8819738571742 6.507892808049704 6.507892808049704 12.149392758355171 0 0.25 1.3010299956639813 0.0 1.1382104921644451 + + [EP]P[VP]KQV;[EP]P[VP]K[AG]V;[VP]K[WR][HA];[EP]{I|L}{I|L}[{I|L}T][HA] 3.6387;2.2775;0.63106;0.46546 +;-;-;- + 123 + 1 1.988 113922.2 1.0 1817 5062 6878 HBL1_DMSO_200M_050219_1,6881 HBL1_DMSO_200M_050219_1,6881,EPPPVKQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6882 36.037 555.0 394390.0 25 0 32072.0 + 34537 SPAPPPQQV 9 164 460.7452540559853 919.4759551787704 2 460.7446472048759 MULTI CID FTMS 0 0 0 6878 351952.875 0.6657010817081349 6 -0.4126434326171875 4 Unmodified _SPAPPPQQV_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 49.93300154707207 0.0405168250806675 3 [PS]APPPQQV 9 0 + 49.548 0.0 0.0 5.3887 5.3887 82.932 0.0 0.0 0.0 9.777236052888476 9.137342758552691 9.137342758552691 6.544387449636204 0 0.7931576817365436 1.3979400086720375 0.2742275032520141 0.0 + + [PS]APPPQQV;[PS]PAPPQQV;[PS]APPP[AG]QV;[PA]SPPPQQV;[PS]APPG[PA]QV;[PS]PAPP[AG]QV;{[SA]|[TG]}PPPPQQV;[PA]SPPP[AG]QV;[PS]PPAPQQV;[PS]PAPG[PA]QV 5.3887;4.6769;4.3872;4.3254;3.8427;3.6755;3.382;3.3239;3.2754;3.1309 +;-;-;-;-;-;-;-;-;- + 1893 1 1.988 166009.1 1.0 1818 5062 6878 HBL1_DMSO_200M_050219_1,6882 HBL1_DMSO_200M_050219_1,6882,SPAPPPQQV True True SPAPPPQQV 36.036998 460.744647204876 13568238.0 6878.0 nc|ENSG00000189079|Q68CP9-3|ARID2;;ENSG00000189079|ENST00000334344|ARID2 8.29085365931193 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6883 36.051 800.0 99586.0 25 0 21760.0 -1 0 42 1085.4256347928288 3253.2550749786865 3 1086.094775378704 MULTI CID FTMS 0 0 0 6878 288936.125 1.0 0 0.0 5 3 E 1 -1 6.9897 0.0 0.0 0.21485 0.0 0.0 2597.026291760455 524.1624849908811 3121.1887767513363 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21485 - 8 + 1 1.988 77392.8 0.9900000095367432 1819 5062 6878 HBL1_DMSO_200M_050219_1,6883 HBL1_DMSO_200M_050219_1,6883, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6884 36.062 658.0 355980.0 25 0 107460.0 29754 QPQFLHLG 8 171 470.2565628927753 0 470.2567321658134 PEAK CID FTMS 0 0 0 6878 249047.140625 0.6883045865677151 6 -0.4126434326171875 6 Unmodified _QPQFLHLG_ ENST00000548662.5_1_12:93772383-93788394:+|nuORF 9.347437153973935 0.5488964601725408 3 PS 2 7 10.969 0.0 0.0 1.1688 0.0 0.0 98.05005797116004 653.338402315025 751.388460286185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PS 1.1688 - 236 + 1 1.988 181677.0 1.0 1820 5062 6878 HBL1_DMSO_200M_050219_1,6884 HBL1_DMSO_200M_050219_1,6884,QPQFLHLG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6885 36.074 683.0 378170.0 25 0 42069.0 -1 MLQDWCRRMG 10 185 437.863576720333 1310.568900761199 3 438.1982604861259 MULTI CID FTMS 0 0 0 6878 240948.390625 0.7933628575823695 -1 0.0297164916992187 7 Oxidation (M) _MLQDWCRRM(Oxidation (M))G_ ENSG00000225110|ENST00000436629|PNMA6F 7.945399516374404 0.6898843699695153 3 AE[{M(Oxidation (M))|F}E]H{I|L} 6 -1 32.981 0.0 0.0 2.5166 0.0 0.0 566.2368751399764 0.0 566.2368751399764 0.0 10.994077049709643 0.0 0.0 0 0.2302046884880938 0.0 1.0044321917401078 0.0 AE[{M(Oxidation (M))|F}E]H{I|L} 2.5166 - 2702 + 1 1.988 199339.8 1.0 1821 5062 6878 HBL1_DMSO_200M_050219_1,6885 HBL1_DMSO_200M_050219_1,6885,MLQDWCRRMG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6886 36.088 800.0 586160.0 25 0 67381.0 + + 38244 TPPIARRV 8 215 455.28494586808 908.55533880296 2 455.2848693728447 MULTI CID FTMS 0 0 0 6878 138479.203125 0.0813260444808688 -2 0.07281494140625 8 Unmodified _TPVLRRAP_ nc|ENSG00000144554|Q9BXW9-1|FANCD2;ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2 40.44857923139169 0.2267865117615937 3 TPVK 4 -1 55.948 0.0 0.0 6.158 0.0 0.0 0.0 480.27048669986567 480.27048669986567 23.584178633612662 0.0 0.0 0.0 0 0.5242275032520141 2.0 0.0 1.1549471895720984 TPVK 6.158 - 776 + 1 1.988 356691.9 0.949999988079071 1822 5062 6878 HBL1_DMSO_200M_050219_1,6886 HBL1_DMSO_200M_050219_1,6886,TPVLRRAP False False TPPIARRV 36.088006 455.2857 8059747.0 6878.0 nc|ENSG00000144554|Q9BXW9-1|FANCD2;;ENSG00000144554|ENST00000675286|FANCD2;;nc|ENSG00000144554|Q9BXW9-3|FANCD2 -0.4681189556916554 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6887 36.094 226.0 193860.0 25 0 15861.0 + 28180 PPVVSSTT 8 102 394.21292194089983 786.4112909485997 2 394.2130004763603 MULTI CID FTMS 0 0 0 6878 131880.84375 1.0 0 0.0 9 Unmodified _PPVVSSTT_ REV__ENSG00000008300|ENST00000164024|CELSR3;REV__nc|ENSG00000008300|Q9NYQ7-2|CELSR3 5.760428011301431 0.7893668129297577 3 {M(Oxidation (M))|F} 1 -1 9.2694 0.0 0.0 1.1787 0.0 0.0 621.3642308673482 0.0 621.3642308673482 0.0 0.22829105951981 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1787 - 31 + 1 1.988 40079.2 1.0 1823 5062 6878 HBL1_DMSO_200M_050219_1,6887 HBL1_DMSO_200M_050219_1,6887,PPVVSSTT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6889 36.111 800.0 13642.0 25 0 863.5 -1 0 32 989.5637726687578 5931.338977212947 6 990.0657226443292 MULTI CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.979 18038.8 0.550000011920929 1824 5063 6888 HBL1_DMSO_200M_050219_1,6889 HBL1_DMSO_200M_050219_1,6889, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6890 36.112 6.2 6390400.0 25 0 876500.0 27441 PISSGSSTWT 10 80 341.4968961337538 1021.4688590014614 3 341.4967529177666 MULTI CID FTMS 0 0 0 6888 8054713.5 0.998917459881434 1 -0.1222457885742187 2 Unmodified _PISSGSSTWT_ ENSG00000144724|ENST00000474889|PTPRG;nc|ENSG00000144724|P23470-2|PTPRG 19.256988751693697 0.5244284437930726 3 [{I|L}P]SSAA 6 6 47.012 0.0 0.0 4.6024 0.0 0.0 0.0 492.1704805963501 492.1704805963501 19.47621246364342 0.0 0.0 0.0 0 0.6861818737241735 1.5228787452803376 0.0 0.0 [{I|L}P]SSAA 4.6024 - 87 + 1 1.979 44492.4 1.0 1825 5063 6888 HBL1_DMSO_200M_050219_1,6890 HBL1_DMSO_200M_050219_1,6890,PISSGSSTWT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6891 36.116 182.0 478280.0 25 0 45996.0 + 12817 GVTFVHPKL 9 137 333.1981946062847 996.572754419054 3 333.1980163455009 MULTI CID FTMS 0 0 0 6888 314209.65625 0.2284008750130615 -7 0.2409553527832031 3 Unmodified _GVTFVHPKL_ REV__ENSG00000278259|ENST00000614623|MYO19;REV__nc|ENSG00000278259|Q96H55-2|MYO19;REV__nc|ENSG00000278259|Q96H55-3|MYO19;REV__nc|ENSG00000278259|Q96H55-4|MYO19 15.847184025352805 0.4077185912009129 3 GTPK{I|L} 5 -1 30.961 0.0 0.0 3.1067 0.0 0.0 482.2609730451188 0.0 482.2609730451188 0.0 15.744171855527966 0.0 0.0 0 0.3807196863200844 0.0 0.3252574989159953 0.0 GTPK{I|L} 3.1067 - 219 1 1.979 73856.4 1.0 1826 5063 6888 HBL1_DMSO_200M_050219_1,6891 HBL1_DMSO_200M_050219_1,6891,GVTFVHPKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6892 36.128 696.0 318530.0 25 0 21089.0 + 13725 HQVDPTEPVG 10 162 539.7618879223295 1077.509222911459 2 539.7620117068291 MULTI CID FTMS 0 0 0 6888 269387.78125 0.2812629857722919 -2 0.1116905212402343 4 Unmodified _HQVDPTEPVG_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 36.506200033944 0.1944608063770638 3 [HQ]VDPTE 7 3 34.942 0.0 0.0 3.2428 0.0 0.0 0.0 268.1294945399076 268.1294945399076 14.880236795169132 0.0 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.5283773187068795 + [HQ]VDPTE 3.2428 + + 1485 1 1.979 178396.2 1.0 1827 5063 6888 HBL1_DMSO_200M_050219_1,6892 HBL1_DMSO_200M_050219_1,6892,HQVDPTEPVG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6893 36.131 162.0 500270.0 25 0 72808.0 + 43821 YFEDRRPSA 9 90 380.8530166149547 1139.537220445064 3 380.8523742556572 MULTI CID FTMS 0 0 0 6888 251763.25 0.6316463242721632 -1 0.0819740295410156 5 Unmodified _YFEDRRPSA_ ENSG00000135821|ENST00000331872|GLUL 16.149105407346934 0.3995459350917656 3 Y{M(Oxidation (M))|F}EDA 5 4 37.959 0.0 0.0 3.3311 0.0 0.0 0.0 511.27559796371776 511.27559796371776 28.354706403678875 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F}EDA 3.3311 - 61 + 1 1.979 69696.8 1.0 1828 5063 6888 HBL1_DMSO_200M_050219_1,6893 HBL1_DMSO_200M_050219_1,6893,YFEDRRPSA False True YFEDRRPSA 36.130914 380.852374255657 2494253.5 6888.0 ENSG00000135821|ENST00000331872|GLUL 3.000630259513855 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6894 36.145 800.0 285680.0 25 0 14775.0 -1 0 114 697.3217831039543 3481.572533186772 5 697.7220947146416 MULTI CID FTMS 0 0 0 6888 214384.90625 0.9531557410217676 -1 0.0819740295410156 6 3 EQAN{[SA]|[TG]} 6 -1 37.396 0.0 0.0 1.0741 0.0 0.0 2863.310437323808 0.0 2863.310437323808 0.0 7.92719286378599 0.0 0.0 0 0.0 0.0 1.1989700043360187 0.0 EQAN{[SA]|[TG]} 1.0741 - 474 1 1.979 166015.8 0.9399999976158142 1829 5063 6888 HBL1_DMSO_200M_050219_1,6894 HBL1_DMSO_200M_050219_1,6894, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6895 36.159 800.0 91670.0 25 0 7089.1 29958 QSQRDIFHSNA 11 103 651.8124585851447 0 651.8130981326103 PEAK CID FTMS 0 0 0 6888 195816.671875 1.0 0 0.0 7 Unmodified _QSQRDIFHSNA_ nc|ENSG808|P60509|ERVPABLB-1 28.49450938151212 0.2463772716552905 3 ASQSPD 6 8 65.41 0.0 0.0 5.0253 0.0 0.0 132.0563184123567 581.2948702447874 713.3511886571441 0.0 0.0 0.0 0.0 0 1.7396518287104437 0.0 2.138210492164445 0.0 ASQSPD 5.0253 - 447 + 1 1.979 61790.2 0.9300000071525574 1830 5063 6888 HBL1_DMSO_200M_050219_1,6895 HBL1_DMSO_200M_050219_1,6895,QSQRDIFHSNA False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6896 36.165 372.0 208250.0 25 0 21816.0 -1 LKSSEQREFVM 11 105 457.230789769195 1368.670539907785 3 457.7693359255791 MULTI CID FTMS 0 0 0 -1 0 8 Oxidation (M) _LKSSEQREFVM(Oxidation (M))_ ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000146376|Q8N392-2|ARHGAP18 3.84590784869206 0.857002691623471 3 {I|L}A[SG]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L} 7 -1 11.616 0.0 0.0 0.84867 0.0 0.0 583.2441615892288 80.05132471256093 663.2954863017898 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.4247425010840047 {I|L}A[SG]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L} 0.84867 - 222 + 1 1.979 65887.4 1.0 1831 5063 6888 HBL1_DMSO_200M_050219_1,6896 HBL1_DMSO_200M_050219_1,6896,LKSSEQREFVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6897 36.18 800.0 245860.0 25 0 24192.0 + 26632 NVVNGESHV 9 161 478.2278703207176 954.4411877082352 2 478.2272216677666 MULTI CID FTMS 0 0 0 6888 172435.75 1.0 0 0.0 9 Unmodified _NVVYYSPN_ ENSG00000124422|ENST00000261497|USP22;nc|ENSG00000124422|Q9UPT9-2|USP22;ENST00000478443.1_1_17:20910195-20914666:-|nuORF 16.942295170755138 0.6606234159769251 3 {[NV]|[RG]}V[WD]SHV 8 4 + 28.184 0.0 0.0 2.953 2.953 67.628 0.0 0.0 0.0 5.484550065040281 2.762064119389489 2.762064119389489 0.5115252244738109 0 0.4247425010840047 0.0 1.0114393726401687 0.0 {[NV]|[RG]}V[WD]SHV;{[NV]|[RG]}VD{[DA]|[EG]}SHV;{[NV]|[RG]}V[WD]SVH;{[NV]|[RG]}VD{[DA]|[EG]}SVH;{[NV]|[RG]}V[WD]VSH;{[NV]|[RG]}VD{[DA]|[EG]}VSH;{[NV]|[RG]}VDWWH;{[NV]|[RG]}QH[MN]NV;{[VA]|[{I|L}G]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{M(Oxidation (M))|F}VNV;{[NV]|[RG]}VD{[CT]|[{M(Oxidation (M))|F}G]}HAP 2.953;2.8994;2.6636;2.61;2.0374;1.9838;1.6285;1.1415;1.1008;0.90531 -;-;-;-;-;-;-;-;-;- 1193 + 1 1.979 150386.1 0.8899999856948853 1832 5063 6888 HBL1_DMSO_200M_050219_1,6897 HBL1_DMSO_200M_050219_1,6897,NVVYYSPN False False NVVNGESHV 36.180238 478.227221667767 0.0 6888.0 ENSG00000124422|ENST00000261497|USP22;;nc|ENSG00000124422|Q9UPT9-2|USP22;;ENST00000478443.1_1_17:20910195-20914666:-|nuORF 6.783796787261963 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6898 36.187 380.0 222110.0 25 0 41669.0 7652 EKHYLFYD 8 83 557.7645741376755 1113.5145953421509 2 557.7651244997978 MULTI CID FTMS 0 0 0 6888 157693.421875 0.6206380475455339 -2 0.1116905212402343 10 Unmodified _EKHYLFYD_ ENSG00000122958|ENST00000263559|VPS26A;ENST00000467852.1_1_10:70884027-70917811:+|nuORF;nc|ENSG00000122958|O75436-2|VPS26A 7.910154910731844 0.7763180056447161 3 YT{M(Oxidation (M))|F}K 4 6 24.123 0.0 0.0 2.1664 0.0 0.0 556.2503263985947 0.0 556.2503263985947 0.0 8.448824968509767 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.1923877696554315 YT{M(Oxidation (M))|F}K 2.1664 - 119 + 1 1.979 70727.8 1.0 1833 5063 6888 HBL1_DMSO_200M_050219_1,6898 HBL1_DMSO_200M_050219_1,6898,EKHYLFYD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6899 36.201 800.0 65323.0 25 0 8319.5 -1 0 49 753.5997192263603 0 753.5997192263603 PEAK CID FTMS 0 0 0 -1 0 11 3 K 1 -1 2.2185 0.0 0.0 0.14739 0.0 0.0 841.8534168689331 532.2194307916624 1374.0728476605957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.14739 - 2 + 1 1.979 45944.6 0.6399999856948853 1834 5063 6888 HBL1_DMSO_200M_050219_1,6899 HBL1_DMSO_200M_050219_1,6899, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6900 36.216 800.0 88665.0 25 0 11932.0 + -1 HAPYMGPL 8 112 451.2153653689812 0 451.2354919314384 PEAK CID FTMS 0 0 0 -1 0 12 Oxidation (M) _HAPYM(Oxidation (M))GPL_ REV__ENSG00000134107|ENST00000256495|BHLHE40 11.114462752807354 0.5290325060821968 3 R 1 -1 5.4846 0.0 0.0 0.60911 0.0 0.0 561.24755095105 180.0434969537719 741.2910479048219 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.60911 - 28 + 1 1.979 61029.4 0.6700000166893005 1835 5063 6888 HBL1_DMSO_200M_050219_1,6900 HBL1_DMSO_200M_050219_1,6900,HAPYMGPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6902 36.22 35.0 734930.0 25 0 74665.0 + 15489 IPSSMSNMR 9 45 511.741670371484 1021.468787809768 2 511.7416869997978 MULTI CID FTMS 0 0 0 6901 837157.4375 0.165721195050718 1 -0.0795135498046875 1 Unmodified _IPSSMSNMR_ ENSG00000119397|ENST00000373855|CNTRL;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 12.240655878213236 0.5053430591993562 3 {I|L}PSSA 5 5 61.766 0.0 0.0 6.0468 0.0 0.0 0.0 563.2067354791624 563.2067354791624 56.28144697160131 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PSSA 6.0468 - 20 + 1 1.978 28644.7 1.0 1836 5064 6901 HBL1_DMSO_200M_050219_1,6902 HBL1_DMSO_200M_050219_1,6902,IPSSMSNMR False True IPSSMSNMR 36.220413 511.741686999798 26462468.0 6901.0 nc|ENSG00000119397|Q7Z7A1-5|CNTRL;;ENSG00000119397|ENST00000373855|CNTRL 3.309661785761515 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6903 36.222 18.0 2274400.0 25 0 142740.0 + 28899 QAPPPPQQV 9 78 481.2587808144996 960.5030086957992 2 481.2587158083916 MULTI CID FTMS 0 0 0 6901 3006507.5 0.2409227482513812 16 -0.6563186645507812 2 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 81.61307344734483 0.0171259190214613 3 [QA]PPP[PG]AQV 10 2 + 51.614 0.0 0.0 5.3737 5.3737 82.848 0.0 0.0 0.0 11.515609695962477 8.947340481202062 8.947340481202062 6.53212513775344 0 1.3979400086720375 1.3979400086720375 0.0 0.5451140161145328 [QA]PPP[PG]AQV;[QA]PPP[QP]QV;[QA]PPG{[HG]|PP}AQV;[PG]APPPQAQV;[PG]APAP[PG]AQV;[QP]PPPQAQV;[PG]AAPP[PG]AQV;[QP]APP[PG]AQV;[QP]PAP[PG]AQV;[QA]PG[YK]AQV 5.3737;4.6936;4.5131;4.1748;4.105;3.8081;3.7916;3.7385;3.7338;3.6305 -;+;-;-;-;-;-;-;-;- + 669 1 1.978 36238.1 1.0 1837 5064 6901 HBL1_DMSO_200M_050219_1,6903 HBL1_DMSO_200M_050219_1,6903,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6904 36.223 15.0 3774500.0 25 0 460770.0 200 AAPSVPGAVV 10 77 434.25035221775966 866.4861515023193 2 434.2503234744072 MULTI CID FTMS 0 0 0 6901 3732123.0 0.2659971864526082 -3 0.2339363098144531 3 Unmodified _AAPSVPGAVV_ nc|ENSG00000049540|P15502-12|ELN;nc|ENSG00000049540|P15502-5|ELN 21.74664581756881 0.480091245866545 3 [PA]KPE 5 7 34.425 0.0 0.0 3.9729 0.0 0.0 0.0 341.1868710670256 341.1868710670256 3.738350322034236 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.4247425010840047 0.0 [PA]KPE 3.9729 - 100 1 1.978 48938.6 1.0 1838 5064 6901 HBL1_DMSO_200M_050219_1,6904 HBL1_DMSO_200M_050219_1,6904,AAPSVPGAVV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 6905 36.224 18.0 3252200.0 25 0 354630.0 + 17853 KQLEDGRTL 9 68 530.2933835632579 1058.5722141933156 2 530.2936279177666 MULTI CID FTMS 0 0 0 6901 3273944.25 0.9060648778683866 -1 0.1222457885742187 4 Unmodified _KQLEDGRTL_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF 34.93206674587334 0.1032771302489716 3 KQ{I|L}ED[K{I|L}]W 8 4 + 65.706 0.0 0.0 6.2071 6.2071 89.028 0.0 0.0 0.0 52.21130963036558 6.197887582883936 6.197887582883936 9.262137858390815 0 1.305462187404089 0.0 0.4247425010840047 0.4247425010840047 KQ{I|L}ED[K{I|L}]W;K[AG]{I|L}ED[K{I|L}]W;KQ{I|L}ED{[NV]|[RG]}[{I|L}T];K[AG]{I|L}ED{[NV]|[RG]}[{I|L}T];KQ{I|L}[QP][MT][{I|L}T] 6.2071;5.3321;5.0909;4.2211;3.0353 -;-;+;-;- + 89 + 1 1.978 50897.7 1.0 1839 5064 6901 HBL1_DMSO_200M_050219_1,6905 HBL1_DMSO_200M_050219_1,6905,KQLEDGRTL True True KQLEDGRTL 36.223948 530.293627917767 19738102.0 6901.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC 7.027658780415853 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6906 36.225 17.0 4774000.0 25 0 907070.0 29366 QKLEEKER 8 87 353.8647970980481 1058.5725618943443 3 353.8644897341728 MULTI CID FTMS 0 0 0 6901 3150090.75 0.8364234527972713 -1 0.1222457885742187 5 Unmodified _QKLEEKER_ ENSG00000103549|ENST00000324685|RNF40;nc|ENSG00000103549|O75150-4|RNF40 28.486842064014134 0.4448922141344407 3 [Q{I|L}]KE{I|L}DKW 8 6 [Q{I|L}]K + + 31.119 14.402 3.9005 2.9397 2.9397 50.103 0.0 0.0 0.0 0.0 16.716838869797513 0.0 0.0 0 0.4247425010840047 0.0 1.2302046884880935 0.0 [Q{I|L}]KE{I|L}DKW 2.9397 - 93 + 1 1.978 72797.4 1.0 1840 5064 6901 HBL1_DMSO_200M_050219_1,6906 HBL1_DMSO_200M_050219_1,6906,QKLEEKER False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6907 36.226 49.0 877620.0 25 0 155720.0 + 19112 LDTNADKQLS 10 84 552.7803004822518 1103.5460480313036 2 552.7805663943291 MULTI CID FTMS 0 0 0 6901 1403514.5 0.770541252285419 -1 0.1222457885742187 6 Unmodified _LDTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 39.41278653710922 0.1637679073694847 3 {NN|[MP]|[D{I|L}]|[EV]}TNADKQ{I|L}S 10 0 + 60.571 0.0 0.0 5.4888 5.4888 75.565 0.0 0.0 0.0 0.8867660091971885 0.8867660091971885 0.8867660091971885 0.8867660091971885 0 1.3935078169319297 1.6989700043360187 0.4247425010840047 0.805462187404089 + + {NN|[MP]|[D{I|L}]|[EV]}TNADKQ{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TR[DG]D{I|L}{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}TR[DG]{I|L}D{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}TNWKQ{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TGGADKQ{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TR{[RE]|[WV]}D{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}TVG{[RE]|[WV]}D{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}TGGWKQ{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TV[WR]D{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}ER[DG]D{I|L}{[TV]|[{I|L}S]} 5.4888;5.4084;5.2928;5.1696;4.6583;4.6569;4.6155;4.3352;4.2963;3.6463 +;-;-;-;-;-;-;-;-;- + 481 + 1 1.978 39892.2 1.0 1841 5064 6901 HBL1_DMSO_200M_050219_1,6907 HBL1_DMSO_200M_050219_1,6907,LDTNADKQLS False True LDTNADKQLS 36.226448 552.780566394329 8311552.5 6901.0 ENSG00000163220|ENST00000368738|S100A9 6.017570813496907 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6908 36.228 69.0 1043700.0 25 0 131480.0 + 24146 LYQNTRSY 8 67 522.7591351097332 1043.5037172862662 2 522.7592040896416 MULTI CID FTMS 0 0 0 6901 931771.4375 0.5518212161122462 -1 0.1222457885742187 7 Unmodified _LYQNTRSY_ ENSG00000126804|ENST00000683701|ZBTB1;nc|ENSG00000126804|Q9Y2K1-2|ZBTB1 49.93300154707207 0.1395624531867191 3 {I|L}YQNTRSY 8 0 + 91.675 0.0 0.0 8.7853 8.7853 94.845 0.0 0.0 0.0 61.67017533604145 14.024174299985006 14.024174299985006 9.262137858390815 0 0.4247425010840047 2.0 0.8494850021680094 0.3807196863200844 + + {I|L}YQNTRSY;{I|L}YQGGTRSY;{I|L}Y[AG]NTRSY;{I|L}Y[AG]GGTRSY;[RH]MPR{[QG]|[NA]}Y 8.7853;7.8977;7.8977;7.0153;1.1827 +;-;-;-;- + 158 + 1 1.978 59249.9 1.0 1842 5064 6901 HBL1_DMSO_200M_050219_1,6908 HBL1_DMSO_200M_050219_1,6908,LYQNTRSY False True LYQNTRSY 36.2281 522.759204089642 7626161.0 6901.0 ENSG00000126804|ENST00000683701|ZBTB1;;nc|ENSG00000126804|Q9Y2K1-2|ZBTB1 5.320244630177816 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6909 36.23 84.0 673270.0 25 0 164810.0 + 2921 AVGPVHNSV 9 74 440.2376905080105 878.460828082821 2 440.2377197146416 MULTI CID FTMS 0 0 0 6901 731693.125 0.2112605577134792 -3 0.2339363098144531 8 Unmodified _AVGPVHNSV_ ENSG00000115760|ENST00000421745|BIRC6 25.399314129420983 0.2080152500878129 3 {[VA]|[{I|L}G]}G[YN]S[R{I|L}] 8 5 + 41.488 0.0 0.0 4.7228 4.7228 80.662 0.0 0.0 0.0 2.9761469314082944 29.665762445130497 2.9761469314082944 6.5501457590975605 0 1.0 2.0 0.0 0.2614393726401688 {[VA]|[{I|L}G]}G[YN]S[R{I|L}];{[VA]|[{I|L}G]}G[YG]GS[R{I|L}];{[VA]|[{I|L}G]}G[YG]SG[R{I|L}];{[VA]|[{I|L}G]}[YN]GS[R{I|L}];{[VA]|[{I|L}G]}[YN]SG[R{I|L}];[VG]A[YN]S[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}[YN]S[R{I|L}];[VG]A[YG]GS[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}[YG]GS[R{I|L}];[VG]A[YG]SG[R{I|L}] 4.7228;3.9772;3.6345;3.5113;2.871;2.0192;1.49;1.2735;1.0342;0.93087 -;-;-;-;-;-;-;-;-;- 188 1 1.978 49537.2 1.0 1843 5064 6901 HBL1_DMSO_200M_050219_1,6909 HBL1_DMSO_200M_050219_1,6909,AVGPVHNSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6910 36.232 114.0 757820.0 25 0 135010.0 + 43890 YFSDRKNNY 9 104 402.8566770285071 1205.548201685721 3 402.8563110232353 MULTI CID FTMS 0 0 0 6901 489985.5 1.0 0 0.0 9 Unmodified _YFSDRKNNY_ ENSG00000084093|ENST00000309042|REST;nc|ENSG00000084093|Q13127-2|REST;nc|ENSG00000084093|Q13127-3|REST;nc|ENSG00000084093|Q13127-4|REST 18.1463463914782 0.3454829746528889 3 Y{M(Oxidation (M))|F}[TP]WEN[H{I|L}] 9 6 + 34.364 0.0 0.0 2.8505 2.8505 79.077 0.0 0.0 0.0 20.634862575211063 2.632192780232792 2.632192780232792 9.208187539523756 0 0.0 0.0 0.5 0.7302046884880937 Y{M(Oxidation (M))|F}[TP]WEN[H{I|L}];Y{M(Oxidation (M))|F}[TP]{[DA]|[EG]}EN[H{I|L}];Y{M(Oxidation (M))|F}[TP]WEGG[H{I|L}] 2.8505;2.0866;1.4809 -;-;- 290 + 1 1.978 70354.1 1.0 1844 5064 6901 HBL1_DMSO_200M_050219_1,6910 HBL1_DMSO_200M_050219_1,6910,YFSDRKNNY False True YFSDRKNNY 36.232352 402.856311023235 2531796.5 6901.0 nc|ENSG00000084093|Q13127-4|REST;;nc|ENSG00000084093|Q13127-2|REST;;nc|ENSG00000084093|Q13127-3|REST;;ENSG00000084093|ENST00000309042|REST 0.2883390188217163 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6911 36.234 69.0 992210.0 25 0 132460.0 + 44860 YPPHVQKV 8 97 323.1837477176532 966.5294137531596 3 323.1833373904228 MULTI CID FTMS 0 0 0 6901 480296.34375 0.6723816655957195 25 -1.0969963073730469 10 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 11.640296217721598 0.738950129755968 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PHVQKV 8 0 + 27.241 0.0 0.0 2.8185 2.8185 49.836 0.0 0.0 0.0 16.132032068088904 9.183662915758216 9.183662915758216 0.0 0 0.0 1.0969100130080565 0.0 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PHVQKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPHQKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PVHQKV;[YV]PPHQKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPH[AG]KV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PHV[AG]KV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PVH[AG]KV;[YV]PPH[AG]KV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[KQ][HV]V 2.8185;2.8185;2.6892;1.995;1.8602;1.8602;1.7309;1.0367;0.18429 +;-;-;-;-;-;-;-;- + 128 + 1 1.978 60731.4 1.0 1845 5064 6901 HBL1_DMSO_200M_050219_1,6911 HBL1_DMSO_200M_050219_1,6911,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6912 36.237 173.0 684340.0 25 0 162810.0 + 33243 SFPASSGVSH 10 98 488.2303025289275 974.446052124655 2 488.2306701540947 MULTI CID FTMS 0 0 0 6901 405314.8125 0.2797293684484499 -24 1.1197471618652344 11 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 56.17704186161178 0.0466144807663799 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH 10 0 + 83.198 0.0 0.0 8.538 8.538 97.519 0.0 0.0 0.0 57.18305085889191 14.146518864155126 14.146518864155126 31.7659970366416 0 0.3807196863200844 2.0 1.079689690656103 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD][WQ]H;{[QD]|[EN]|[WG]|[KD]|[RS]}P[MT]APDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[VG][WE][PG];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD]EP[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}P{M(Oxidation (M))|F}[VG]PDT;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QD]|[EN]|[WG]|[KD]|[RS]}[VG]PDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD]EPA[PG];[PA][TA]{[SA]|[TG]}SH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 8.538;5.2781;2.6423;2.521;2.4306;2.2738;1.8769;1.727;1.6759;1.2854 +;-;-;-;-;-;-;-;-;- + 434 + 1 1.978 94435.6 1.0 1846 5064 6901 HBL1_DMSO_200M_050219_1,6912 HBL1_DMSO_200M_050219_1,6912,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6913 36.242 235.0 559720.0 25 0 44482.0 + 10832 GAAGPLQR 8 133 385.2191813541884 768.4238097751768 2 385.2190429568291 MULTI CID FTMS 0 0 0 6901 390554.28125 0.7390500552850405 -3 0.2339363098144531 12 Unmodified _GAAGPLQR_ REV__ENST00000367201.7_1_1:204118971-204121014:-|nuORF 44.40701690623563 0.1655546087385432 3 [AG]AGP{I|L}QR 8 -1 + 55.049 0.0 0.0 7.1638 7.1638 79.728 0.0 0.0 0.0 10.268024924119672 0.3962301591859258 0.3962301591859258 0.3962301591859258 0 0.7742275032520141 2.0 0.0 0.3252574989159953 [AG]AGP{I|L}QR;[AG]AGP{I|L}RQ;[AG]AGP{I|L}[AG]R;QQP{I|L}QR;QQP{I|L}RQ;[AG]AGKK[HT];QQP{I|L}[AG]R;[AG]QKK[HT];QQKK[HT];[AG]KKQ[HT] 7.1638;7.1123;5.9585;5.8276;5.776;4.9312;4.6017;3.8033;3.595;3.5741 +;-;-;-;-;-;-;-;-;- + 258 + 1 1.978 107638.0 1.0 1847 5064 6901 HBL1_DMSO_200M_050219_1,6913 HBL1_DMSO_200M_050219_1,6913,GAAGPLQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6914 36.245 177.0 455020.0 25 0 47603.0 + 5800 DPPQPNHSI 9 104 502.7435731261392 1003.4725933190784 2 502.7441284060478 MULTI CID FTMS 0 0 0 6901 288205.3125 0.3807330908934785 -2 0.2042198181152343 13 Unmodified _DPPQPNHSI_ ENSG00000106948|ENST00000374088|AKNA;ENST00000223791.7_2_9:117130488-117139135:-|nuORF;nc|ENSG00000106948|Q7Z591-2|AKNA;nc|ENSG00000106948|Q7Z591-3|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA 55.50274090549119 0.0285720310785888 3 DPPQPNHS{I|L} 9 0 + 65.645 0.0 0.0 6.5418 6.5418 91.097 0.0 0.0 0.0 48.5319940732832 10.45084933567233 10.45084933567233 12.460762528683716 0 1.024227503252014 2.0 0.6109243748081782 0.3252574989159953 + + DPPQPNHS{I|L};DPPQPGGHS{I|L};DPPQ[QT][YR];[QP]P{M(Oxidation (M))|F}PQP{[HG]|PP};[HS][WR]QP{[HG]|PP} 6.5418;5.3;4.695;2.3659;0.94212 +;-;-;-;- + 278 + 1 1.978 66595.4 1.0 1848 5064 6901 HBL1_DMSO_200M_050219_1,6914 HBL1_DMSO_200M_050219_1,6914,DPPQPNHSI True True DPPQPNHSI 36.245188 502.744128406048 6396268.0 6901.0 nc|ENSG00000106948|Q7Z591-7|AKNA;;nc|ENSG00000106948|Q7Z591-2|AKNA;;ENST00000223791.7_2_9:117130488-117139135:-|nuORF;;ENSG00000106948|ENST00000374088|AKNA;;nc|ENSG00000106948|Q7Z591-3|AKNA 7.559567292531331 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6915 36.249 211.0 767700.0 25 0 59990.0 + 5563 DMPDDNKRI 9 149 368.5102498885675 1102.5089202659026 3 368.5098449587822 MULTI CID FTMS 0 0 0 6901 270216.46875 0.1991793887327136 -3 0.2339363098144531 14 Unmodified _DMPDDNKRI_ ENSG00000165983|ENST00000535784|PTER 56.17704186161178 0.0281986971544335 3 [MD]PDDNKR{I|L} 9 0 + 65.02 0.0 0.0 5.8974 5.8974 83.731 0.0 0.0 0.0 24.13734275855269 5.593080109070122 5.593080109070122 5.593080109070122 0 0.2742275032520141 1.6989700043360187 0.2887254899964357 0.9247425010840048 + + [MD]PDDNKR{I|L};[MD]PDDNK{I|L}R;[MD]PDDGGKR{I|L};[MD]PDDGGK{I|L}R;[MD]PD{I|L}Y{[HG]|PP}R;[MD]PD{I|L}Y[RP]P;[MD]PD[KP][C(Carbamidomethyl (C))K]{I|L};[MD]P{I|L}DY{[HG]|PP}R;[MD]P{I|L}DY[RP]P;[MD]{I|L}PDY{[HG]|PP}R 5.8974;5.3901;5.0622;4.5549;3.6236;3.6102;3.5599;3.3326;3.3192;2.5026 +;-;-;-;-;-;-;-;-;- + 563 + 1 1.978 138849.3 1.0 1849 5064 6901 HBL1_DMSO_200M_050219_1,6915 HBL1_DMSO_200M_050219_1,6915,DMPDDNKRI True True DMPDDNKRI 36.24919 368.509844958782 6804605.0 6901.0 ENSG00000165983|ENST00000535784|PTER 4.926867326100667 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6916 36.263 800.0 262970.0 25 0 60922.0 28919 QAPTEQRPG 9 174 492.2496197480561 982.4846865629122 2 492.2488891482353 MULTI CID FTMS 0 0 0 6901 241644.453125 0.4560907335155819 15 -0.6358985900878906 15 Unmodified _QAPTEQRPG_ ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA 25.399314129420983 0.2080152500878129 3 [QA]PPP 5 5 38.834 0.0 0.0 3.9527 0.0 0.0 0.0 489.2106722467407 489.2106722467407 28.4556125503638 0.0 0.0 0.0 0 0.6861818737241735 1.3979400086720375 0.0 0.0 [QA]PPP 3.9527 - 352 + 1 1.978 164940.0 1.0 1850 5064 6901 HBL1_DMSO_200M_050219_1,6916 HBL1_DMSO_200M_050219_1,6916,QAPTEQRPG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6917 36.266 151.0 408800.0 25 0 29775.0 + 30637 RFNSQSTSY 9 108 545.2509958632396 1088.4874387932791 2 545.2498046755791 MULTI CID FTMS 0 0 0 6901 241745.5 0.8081466374686571 -1 0.1222457885742187 16 Unmodified _RFNSQSTSY_ ENSG00000197345|ENST00000362034|MRPL21;ENST00000536637.1_1_11:68665368-68671263:-|nuORF 51.629811660486645 0.0367964933207742 3 [HT]R[HT]STSY 9 5 + 65.242 0.0 0.0 5.9939 5.9939 86.109 0.0 0.0 0.0 4.989919302670458 51.87748793151172 4.989919302670458 7.9622070558279745 0 1.0 1.0457574905606752 1.4361818737241734 0.0 [HT]R[HT]STSY;{[MG]|[TS]}[KT]QSSTSY;[AG]SV[KC]SSTSY;[AG]EY[{I|L}V]STSY;{[QS]|[NT]}V[KC]SSTSY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y[{I|L}V]STSY;{[MG]|[TS]}[KT]SQSTSY;[HT]R[HT]SGMY;{[SA]|[TG]}GV[KC]SSTSY;{[MG]|[TS]}[KT][AG]SSTSY 5.9939;5.2624;5.2525;5.1911;5.0946;5.0372;4.9243;4.6603;4.4654;4.4204 -;-;-;-;-;-;-;-;-;- 693 1 1.978 52880.2 1.0 1851 5064 6901 HBL1_DMSO_200M_050219_1,6917 HBL1_DMSO_200M_050219_1,6917,RFNSQSTSY True True RFNSQSTSY 36.266019 545.249804675579 1427905.5 6901.0 ENSG00000197345|ENST00000362034|MRPL21;;ENST00000536637.1_1_11:68665368-68671263:-|nuORF 5.304401715596517 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6918 36.271 278.0 548450.0 25 0 24680.0 + 13988 HYYEGGNSQY 10 144 609.2467929312918 1216.4790329293835 2 609.2471191287041 MULTI CID FTMS 0 0 0 6901 222450.109375 0.1510954136162745 -2 0.2042198181152343 17 Unmodified _HYYEGGNSQY_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-3|SS18L1;nc|ENSG00000184402|O75177-4|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 99.79894945604345 0.0086314121850342 3 {[WN]|[YH]}YEGGNSQY 10 0 + 99.109 0.0 0.0 8.1472 8.1472 88.318 0.0 0.0 0.0 4.393326938302636 16.53212513775344 4.393326938302636 4.393326938302636 0 0.2887254899964357 1.3979400086720375 1.960409376976188 0.3252574989159953 + + {[WN]|[YH]}YEGGNSQY;GGWYEGGNSQY;GGSP{M(Oxidation (M))|F}{M(Oxidation (M))|F}GGNSQY;{[WN]|[YH]}YEGGGGSQY;{[WN]|[YH]}YEGGNS[AG]Y;{[WN]|[YH]}YENNSQY;GGT{M(Oxidation (M))|F}TWGNSQY;GGWYEGGNS[AG]Y;[AG]S{M(Oxidation (M))|F}TWGNSQY;GGWYENNSQY 8.1472;7.786;7.4515;7.3938;7.3938;7.3229;7.0866;7.0356;7.0041;6.9582 +;-;-;-;-;-;-;-;-;- + 11019 1 1.978 114609.5 1.0 1852 5064 6901 HBL1_DMSO_200M_050219_1,6918 HBL1_DMSO_200M_050219_1,6918,HYYEGGNSQY True True HYYEGGNSQY 36.271165 609.247119128704 6501873.5 6901.0 nc|ENSG00000184402|O75177-4|SS18L1;;ENSG00000184402|ENST00000331758|SS18L1;;nc|ENSG00000184402|O75177-3|SS18L1;;ENSG00000141380|ENST00000415083|SS18;;nc|ENSG00000184402|O75177-5|SS18L1;;nc|ENSG00000184402|O75177-2|SS18L1 8.216896533966064 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6919 36.277 315.0 382820.0 25 0 38605.0 + 43096 VYNPQSKTY 9 128 550.2741687855171 1098.533784637834 2 550.2743408083916 MULTI CID FTMS 0 0 0 6901 194336.703125 0.3538673659978203 -1 0.1222457885742187 18 Unmodified _VYNPQSKTY_ ENSG00000154832|ENST00000285106|CXXC1;ENST00000587170.1_1_18:47808965-47809781:-|nuORF;ENST00000587342.1_1_18:47808965-47809814:-|nuORF;ENST00000590901.5_1_18:47808965-47812340:-|nuORF;nc|ENSG00000154832|Q9P0U4-2|CXXC1 72.96794272382148 0.0199516581995792 3 VYNPQGPQS 9 4 103.43 0.0 0.0 9.4155 0.0 0.0 0.0 125.07253442935782 125.07253442935782 70.73262694418709 0.0 0.0 0.0 0 0.9247425010840048 2.0 2.2404443404078203 0.9163865622122672 VYNPQGPQS 9.4155 - 1481 + 1 1.978 99172.5 1.0 1853 5064 6901 HBL1_DMSO_200M_050219_1,6919 HBL1_DMSO_200M_050219_1,6919,VYNPQSKTY True True VYNPQSKTY 36.276919 550.274340808392 2289647.25 6901.0 ENST00000590901.5_1_18:47808965-47812340:-|nuORF;;ENST00000587342.1_1_18:47808965-47809814:-|nuORF;;nc|ENSG00000154832|Q9P0U4-2|CXXC1;;ENSG00000154832|ENST00000285106|CXXC1;;ENST00000587170.1_1_18:47808965-47809781:-|nuORF 8.185538450876871 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6920 36.282 180.0 294770.0 25 0 17479.0 + 21187 LPDATSSHRTV 11 102 395.2070921144592 1182.5994469435775 3 395.2065612673759 MULTI CID FTMS 0 0 0 6901 189163.953125 0.023990621725352 25 -1.0969963073730469 19 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 14.824719086485125 0.7267755269206433 3 {I|L}PDATSS 7 4 53.942 0.0 0.0 4.5613 0.0 0.0 0.0 508.2674421844926 508.2674421844926 38.72505500915164 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 + {I|L}PDATSS 4.5613 + + 268 + 1 1.978 51771.0 1.0 1854 5064 6901 HBL1_DMSO_200M_050219_1,6920 HBL1_DMSO_200M_050219_1,6920,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6921 36.295 800.0 191290.0 25 0 9947.9 -1 0 106 874.8428665052567 4369.177950193283 5 875.0444824099541 MULTI CID FTMS 0 0 0 6901 175348.65625 0.7261689216292052 -2 0.2042198181152343 20 3 PPPGQQ 6 -1 30.266 0.0 0.0 0.69271 0.0 0.0 2568.29729773931 1193.5506075494752 3761.847905288785 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPGQQ 0.69271 - 397 + 1 1.978 116655.8 0.6600000262260437 1855 5064 6901 HBL1_DMSO_200M_050219_1,6921 HBL1_DMSO_200M_050219_1,6921, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6923 36.3 15.0 4463400.0 25 0 613660.0 38252 TPVPLRAR 8 63 303.85899465487097 0 303.8590270876884 PEAK CID FTMS 0 0 0 6922 3281128.25 0.5390434742680051 1 -0.055145263671875 1 Unmodified _TPVPLRAR_ ENST00000534035.1_1_11:44102597-44105415:+|nuORF 18.13498045792455 0.4501116112875982 3 T 1 7 10.044 0.0 0.0 1.6583 0.0 0.0 435.597690992556 66.03568445377186 501.6333754463279 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + T 1.6583 + + 4 + 1 1.978 58894.8 1.0 1856 5065 6922 HBL1_DMSO_200M_050219_1,6923 HBL1_DMSO_200M_050219_1,6923,TPVPLRAR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6924 36.302 101.0 616000.0 25 0 141070.0 43820 YFEDRRPSA 9 61 570.7750205546147 1139.5354881760293 2 570.7751953005791 MULTI CID FTMS 0 0 0 6922 480986.875 0.4593464055252476 1 -0.055145263671875 2 Unmodified _YFEDRRPSA_ ENSG00000135821|ENST00000331872|GLUL 15.847184025352805 0.4077185912009129 3 AQQEN 5 9 17.703 0.0 0.0 1.5535 0.0 0.0 0.0 566.2760714166624 566.2760714166624 8.750612633917 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AQQEN 1.5535 - 77 + 1 1.978 55492.5 1.0 1857 5065 6922 HBL1_DMSO_200M_050219_1,6924 HBL1_DMSO_200M_050219_1,6924,YFEDRRPSA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6925 36.305 147.0 594350.0 25 0 78308.0 + 17607 KPTAAFHLL 9 86 499.2932179913806 996.5718830495612 2 499.2932006716728 MULTI CID FTMS 0 0 0 6922 553535.625 0.1644161519339152 -5 0.3565483093261719 3 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 3 KPT 3 -1 43.94 0.0 0.0 4.4091 0.0 0.0 0.0 667.3546522844424 667.3546522844424 29.65626741633752 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 KPT 4.4091 + + 315 + 1 1.978 70489.5 1.0 1858 5065 6922 HBL1_DMSO_200M_050219_1,6925 HBL1_DMSO_200M_050219_1,6925,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6926 36.309 209.0 480620.0 25 0 64055.0 + 17458 KPAKWKMH 8 115 513.2904598357735 1024.566366738347 2 513.2906371951103 MULTI CID FTMS 0 0 0 6922 472522.15625 0.6798075425606106 -2 0.2017593383789062 4 Unmodified _KPAKWKMH_ REV__ENSG00000179057|ENST00000513874|IGSF22 16.942295170755138 0.6606234159769251 3 KPT 3 -1 39.693 0.0 0.0 3.8741 0.0 0.0 0.0 695.3484517195536 695.3484517195536 19.51544993495972 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.8741 - 308 + 1 1.978 82338.8 1.0 1859 5065 6922 HBL1_DMSO_200M_050219_1,6926 HBL1_DMSO_200M_050219_1,6926,KPAKWKMH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6927 36.313 230.0 303050.0 25 0 50988.0 + 36352 SYPHHATQL 9 106 527.2593360808548 1052.5041192285096 2 527.2603027224541 MULTI CID FTMS 0 0 0 6922 274615.4375 0.0220518199477772 3 -0.1289100646972656 5 Unmodified _SYPHHATQL_ ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 41.8396318013385 0.0653578398400075 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 9 4 + 26.142 0.0 0.0 2.4838 2.4838 67.668 0.0 0.0 0.0 0.9691001300805624 4.137342758552695 0.9691001300805624 0.9691001300805624 0 0.3054621874040891 0.0 0.8807196863200843 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[QN]|[E{I|L}]|[KN]}EATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}ATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{NN|[MP]|[D{I|L}]|[EV]}[PS]RHP[MT];{NN|[MP]|[D{I|L}]|[EV]}[DV]TQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HAT[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[TV]|[{I|L}S]}[DP]RHP[MT];{[{M(Oxidation (M))|F}C]|[YS]}[RH]Q{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[QN]|[E{I|L}]|[KN]}EAT[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HM]{I|L}QTAAA[NP] 2.4838;2.3917;1.793;1.7174;1.7094;1.6089;1.6041;1.5872;1.5168;1.2743 -;-;-;-;-;-;-;-;-;- 714 1 1.978 60254.5 1.0 1860 5065 6922 HBL1_DMSO_200M_050219_1,6927 HBL1_DMSO_200M_050219_1,6927,SYPHHATQL True True SYPHHATQL 36.313183 527.260302722454 206426328.0 6922.0 ENST00000563314.5_1_16:28834580-28846939:+|nuORF;;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;;ENSG00000168488|ENST00000336783|ATXN2L;;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;;nc|ENSG00000168488|Q8WWM7-5|ATXN2L 8.829807917277018 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6928 36.327 800.0 285770.0 25 0 22314.0 + 2596 ASNDYTQQATQ 11 160 634.7729767980261 1267.531400662852 2 634.7722045779228 MULTI CID FTMS 0 0 0 6922 234808.765625 0.2818075553079563 -2 0.2017593383789062 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNDYTQQATQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 117.83759599426816 0.0338141295894295 3 [DN]{[CP]|[EA]}YTQQATQ 11 4 + 50.093 0.0 0.0 3.952 3.952 70.777 0.0 0.0 0.0 3.538542173124597 15.01021569657722 3.538542173124597 0.999686271123096 0 1.2870156338638594 1.3979400086720375 1.113982988912431 1.1936726795685342 [DN]{[CP]|[EA]}YTQQATQ;[DN]{[CP]|[EA]}Y{[HG]|PP}YATQ;[DN]SY[DV]QQATQ;[NS]DY[DV]QQATQ;[AG]TAQ[C(Carbamidomethyl (C))S]HHATQ;{[CP]|[EA]}[DN]YTQQATQ;[QA]DDYTQQATQ;{[CP]|[EA]}[DN]Y{[HG]|PP}YATQ;[AG]TAYDDQQATQ;[NS]VYDDQQATQ 3.952;3.8732;3.595;3.4136;3.2061;3.2023;3.1398;3.1234;3.1149;3.0903 -;-;-;-;-;-;-;-;-;- 11057 1 1.978 170070.8 0.959999978542328 1861 5065 6922 HBL1_DMSO_200M_050219_1,6928 HBL1_DMSO_200M_050219_1,6928,ASNDYTQQATQ True False ASNDYTQQATQ 36.327023 634.772204577923 9270759.0 6922.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 9.421711285909018 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6929 36.331 235.0 373010.0 25 0 29849.0 + 41627 VPPPPLLQG 9 115 459.2764221568175 916.538291380435 2 459.2766296267509 MULTI CID FTMS 0 0 0 6922 209213.25 0.5949251858579144 -4 0.3134498596191406 7 Unmodified _VPPPPLLQG_ REV__ENSG00000112139|ENST00000434837|MDGA1;REV__nc|ENSG00000112139|Q8NFP4-2|MDGA1 26.88365393820708 0.1891292719743517 3 VPPPP 5 -1 61.995 0.0 0.0 6.764 0.0 0.0 0.0 426.2364596002563 426.2364596002563 41.025684359364405 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 VPPPP 6.764 + + 151 + 1 1.978 75209.9 1.0 1862 5065 6922 HBL1_DMSO_200M_050219_1,6929 HBL1_DMSO_200M_050219_1,6929,VPPPPLLQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6930 36.345 800.0 242940.0 25 0 13257.0 + 3105 AVPDKINQA 9 187 478.2641126408986 0 478.2638122439384 PEAK CID FTMS 0 0 0 6922 185631.3125 1.0 0 0.0 8 Unmodified _AVPDKINQA_ ENSG00000164307|ENST00000443439|ERAP1;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1 32.30548876998284 0.0995446103270859 3 {M(Oxidation (M))|F}QN{I|L}PDG 7 8 17.986 0.0 0.0 1.8843 0.0 0.0 112.08915098625808 68.05137048892811 180.14052147518618 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4634679910804404 0.7302046884880937 {M(Oxidation (M))|F}QN{I|L}PDG 1.8843 - 237 + 1 1.978 149030.9 0.8500000238418579 1863 5065 6922 HBL1_DMSO_200M_050219_1,6930 HBL1_DMSO_200M_050219_1,6930,AVPDKINQA True True AVPDKINQA 36.345248 478.263812243938 2628842.75 6922.0 nc|ENSG00000164307|Q9NZ08-2|ERAP1;;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;;ENSG00000164307|ENST00000443439|ERAP1 4.589238007863362 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6931 36.351 288.0 268650.0 25 0 25134.0 + 44866 YPPHVQKV 8 112 484.2717553203813 966.5289577075628 2 484.2712585330009 MULTI CID FTMS 0 0 0 6922 155514.90625 0.9117902731599968 -3 0.2837333679199219 9 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 23.1484247019978 0.5573009939494978 3 YPP 3 5 44.609 0.0 0.0 4.6154 0.0 0.0 0.0 606.3368624322874 606.3368624322874 13.964599044329583 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + YPP 4.6154 + + 362 + 1 1.978 65133.2 1.0 1864 5065 6922 HBL1_DMSO_200M_050219_1,6931 HBL1_DMSO_200M_050219_1,6931,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6933 36.359 242.0 402210.0 25 0 48535.0 38250 TPVPLRAR 8 107 455.28494586808 908.55533880296 2 455.2851135134697 MULTI CID FTMS 0 0 0 6932 221134.59375 0.129867889197325 2 -0.0737648010253906 1 Unmodified _TPVPLRAR_ ENST00000534035.1_1_11:44102597-44105415:+|nuORF 32.116972079565 0.368454113111938 3 TP 2 6 40.403 0.0 0.0 4.4469 0.0 0.0 0.0 707.4318331354124 707.4318331354124 24.632807498349536 0.0 0.0 0.0 0 0.5709991640913001 2.0 0.0 0.0 + TP 4.4469 + + 56 + 1 1.98 81912.4 1.0 1865 5066 6932 HBL1_DMSO_200M_050219_1,6933 HBL1_DMSO_200M_050219_1,6933,TPVPLRAR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6934 36.363 230.0 428160.0 25 0 38265.0 -1 HHCLPWAYPM 10 115 437.863576720333 1310.568900761199 3 437.8632690310478 MULTI CID FTMS 0 0 0 6932 348070.0625 0.9688768344911964 18 -0.6773796081542969 2 Carbamidomethyl (C) _HHC(Carbamidomethyl (C))LPWAYPM_ ENST00000533086.5_1_19:15225833-15226058:-|nuORF 4.189502756095605 0.7072575900373772 3 Y 1 -1 11.42 0.0 0.0 0.87138 0.0 0.0 1129.4950462463537 0.0 1129.4950462463537 0.0 1.041379712135413 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.87138 + + 33 + 1 1.98 82072.3 1.0 1866 5066 6932 HBL1_DMSO_200M_050219_1,6934 HBL1_DMSO_200M_050219_1,6934,HHCLPWAYPM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6936 36.367 66.0 1014300.0 25 0 116690.0 + 13058 HAYSVRRL 8 93 334.5261409971185 1000.5565935915556 3 334.5259277224541 MULTI CID FTMS 0 0 0 6935 729727.8125 0.4351879703171609 -1 0.0122756958007812 1 Unmodified _HAYSVRRL_ ENSG00000213983|ENST00000397120|AP1G2;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF;ENST00000554554.5_1_14:24032570-24032684:-|nuORF;ENST00000554982.5_1_14:24031495-24032684:-|nuORF;ENST00000557132.1_1_14:24032416-24032684:-|nuORF 12.531546534597751 0.7257836412119636 3 HA{I|L} 3 5 43.861 0.0 0.0 4.3837 0.0 0.0 0.0 676.3540509139474 676.3540509139474 22.89233934604914 0.0 0.0 0.0 0 0.6694451763165201 1.3979400086720375 0.0 0.0 HA{I|L} 4.3837 - 37 + 1 1.98 56975.5 1.0 1867 5067 6935 HBL1_DMSO_200M_050219_1,6936 HBL1_DMSO_200M_050219_1,6936,HAYSVRRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6937 36.369 85.0 554820.0 25 0 66780.0 + 7405 EGKGAQPL 8 76 400.2187291386705 798.422905344141 2 400.2190429568291 MULTI CID FTMS 0 0 0 6935 549895.0 0.4728035532382802 -2 0.0674209594726562 2 Unmodified _EGKGAQPL_ REV__nc|ENSG00000089022|Q8IW41|MAPKAPK5 14.581692164780916 0.6954967302934248 3 {[DA]|[EG]}[DP][R{I|L}]{I|L} 7 -1 + 32.28 0.0 0.0 4.0429 4.0429 83.953 0.0 0.0 0.0 18.300303788948256 11.849104129495416 11.849104129495416 17.50819903441021 0 0.3807196863200844 2.0 0.0 0.4247425010840047 {[DA]|[EG]}[DP][R{I|L}]{I|L};{[SA]|[TG]}[Q{I|L}]VP{[QG]|[NA]};[VG][WR]P{[QG]|[NA]} 4.0429;1.8501;0.82081 -;-;- 40 + 1 1.98 40613.8 1.0 1868 5067 6935 HBL1_DMSO_200M_050219_1,6937 HBL1_DMSO_200M_050219_1,6937,EGKGAQPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6938 36.37 33.0 1505200.0 25 0 95504.0 23223 LSSSSSLLPTL 11 82 552.8114011077192 1103.6082492822384 2 552.8117553591728 MULTI CID FTMS 0 0 0 6935 983699.3125 1.0 0 0.0 3 Unmodified _LSSSSSLLPTL_ ENST00000338745.10_3_3:18465390-18465639:-|nuORF 12.240655878213236 0.7805268987462184 3 QK{[WN]|[YH]}{I|L}S 6 10 19.886 0.0 0.0 1.8019 0.0 0.0 329.1934593876546 0.0 329.1934593876546 0.0 7.287858812658838 0.0 0.0 0 0.5 0.0 0.6382104921644451 0.0 QK{[WN]|[YH]}{I|L}S 1.8019 - 89 + 1 1.98 43497.4 1.0 1869 5067 6935 HBL1_DMSO_200M_050219_1,6938 HBL1_DMSO_200M_050219_1,6938,LSSSSSLLPTL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6939 36.377 365.0 431130.0 25 0 50572.0 + 39798 VERVKEVK 8 120 493.8033155880408 985.5920782428816 2 493.8033630251884 MULTI CID FTMS 0 0 0 6935 287641.875 0.3088313125037201 -2 0.0674209594726562 4 Unmodified _VERVKEVK_ ENSG00000132274|ENST00000379965|TRIM22;ENST00000460454.1_1_11:5717462-5717939:+|nuORF;nc|ENSG00000132274|Q8IYM9-2|TRIM22 29.081581746732265 0.4323690340403521 3 WPEETVK 7 6 55.411 0.0 0.0 5.6221 0.0 0.0 98.16008468995037 0.0 98.16008468995037 0.0 29.736607226101555 0.0 0.0 0 1.305462187404089 0.0 0.0 0.3807196863200844 WPEETVK 5.6221 - 467 + 1 1.98 124659.8 1.0 1870 5067 6935 HBL1_DMSO_200M_050219_1,6939 HBL1_DMSO_200M_050219_1,6939,VERVKEVK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6940 36.382 268.0 324020.0 25 0 40911.0 1027 AGDNHSGV 8 136 378.66713936502623 755.3197257968525 2 378.6670410037041 MULTI CID FTMS 0 0 0 6935 178168.59375 1.0 0 0.0 5 Unmodified _AGDNHSGV_ ENSG00000173705|ENST00000309558|SUSD5 2.889219685676258 0.8067950007271085 3 V 1 7 12.764 0.0 0.0 1.6899 0.0 0.0 638.240210271265 0.0 638.240210271265 0.0 0.6550316274422485 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.6899 + + 50 + 1 1.98 73858.0 1.0 1871 5067 6935 HBL1_DMSO_200M_050219_1,6940 HBL1_DMSO_200M_050219_1,6940,AGDNHSGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6941 36.388 342.0 273170.0 25 0 78099.0 22216 LPRCPSAVP 9 119 470.2565628927753 0 470.2579528689384 PEAK CID FTMS 0 0 0 6935 157807.515625 0.436140870868687 11 -0.4705009460449219 6 Unmodified _LPRCPSAVP_ ENST00000356166.10_3_16:30669855-30670089:+|nuORF 6.723162845929126 0.3444685223463734 3 DN 2 9 7.9196 0.0 0.0 0.84385 0.0 0.0 608.3808798365288 98.0251940362914 706.4060738728202 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5356668758921829 DN 0.84385 - 76 + 1 1.98 76398.8 1.0 1872 5067 6935 HBL1_DMSO_200M_050219_1,6941 HBL1_DMSO_200M_050219_1,6941,LPRCPSAVP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 6942 36.397 491.0 299390.0 25 0 11864.0 + 2367 AQLRQYHRL 9 167 395.5598247120709 1183.6576447364123 3 395.5598022341728 MULTI CID FTMS 0 0 0 6935 111773.9765625 1.0 0 0.0 7 Unmodified _AQLRQYHRL_ ENSG00000117614|ENST00000236273|SYF2;nc|ENSG00000117614|O95926-2|SYF2 21.59015148037692 0.2564810811560323 3 AQ{I|L}RQ 5 4 38.034 0.0 0.0 3.2133 0.0 0.0 0.0 584.2999361627561 584.2999361627561 8.348848985623647 0.0 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.4247425010840047 + AQ{I|L}RQ 3.2133 + + 666 + 1 1.98 118209.8 1.0 1873 5067 6935 HBL1_DMSO_200M_050219_1,6942 HBL1_DMSO_200M_050219_1,6942,AQLRQYHRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6943 36.41 800.0 105120.0 25 0 3249.7 -1 0 94 642.8992248361175 3209.459741847587 5 643.1005737185478 MULTI CID FTMS 0 0 0 6935 99842.21875 1.0 0 0.0 8 3 GTWGN 5 -1 34.654 0.0 0.0 1.0797 0.0 0.0 1489.702812054059 1201.5447508613356 2691.2475629153946 0.0 0.0 0.0 0.0 0 1.5 0.0 0.4247425010840047 0.0 GTWGN 1.0797 - 599 + 1 1.98 67877.1 0.6800000071525574 1874 5067 6935 HBL1_DMSO_200M_050219_1,6943 HBL1_DMSO_200M_050219_1,6943, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6944 36.424 800.0 200070.0 25 0 11325.0 + 26770 PAGAEEKPV 9 192 449.2369387863761 0 449.2361022830009 PEAK CID FTMS 0 0 0 6935 92170.5234375 0.7457501007738203 3 -0.2484245300292968 9 Unmodified _PAGAEEKPV_ REV__ENSG00000177380|ENST00000334186|PPFIA3;REV__nc|ENSG00000177380|O75145-2|PPFIA3 9.347437153973935 0.3197567915069932 3 P 1 -1 10.485 0.0 0.0 1.1696 0.0 0.0 243.08391316916965 553.3000927949251 796.3840059640947 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 P 1.1696 + + 48 + 1 1.98 124675.3 0.5600000023841858 1875 5067 6935 HBL1_DMSO_200M_050219_1,6944 HBL1_DMSO_200M_050219_1,6944,PAGAEEKPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6946 36.431 232.0 215630.0 25 0 16848.0 + 13726 HQVDPTEPVG 10 79 539.7618879223295 1077.509222911459 2 539.7618896365166 MULTI CID FTMS 0 0 0 6945 245223.609375 0.2560336041769552 3 -0.2347335815429687 1 Unmodified _HQVDPTEPVG_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 26.268140514670165 0.3785003716575977 3 [VP]YYH{M(Oxidation (M))|F}PR 8 8 + 32.791 0.0 0.0 3.0432 3.0432 78.065 0.0 0.0 0.0 7.0865254442813 13.125245087498914 7.0865254442813 9.032125137753432 0 0.6549471895720985 1.6989700043360187 0.0 0.0 [VP]YYH{M(Oxidation (M))|F}PR;[HQ]V{[SA]|[TG]}H{M(Oxidation (M))|F}PR;[HQ]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H{M(Oxidation (M))|F}PR 3.0432;2.205;1.8831 -;-;- 112 1 1.98 46927.5 1.0 1876 5068 6945 HBL1_DMSO_200M_050219_1,6946 HBL1_DMSO_200M_050219_1,6946,HQVDPTEPVG False True HQVDPTEPVG 36.430791 539.761889636517 11886628.0 6945.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 9.636262575785318 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6947 36.445 800.0 32481.0 25 0 3324.1 + -1 DFAMKCQRCLY 11 53 754.3319050592166 0 754.3317138552666 PEAK CID FTMS 0 0 0 6945 52454.953125 0.6158451037526168 1 -0.1017951965332031 2 2 Carbamidomethyl (C),Oxidation (M) _DFAM(Oxidation (M))KC(Carbamidomethyl (C))QRC(Carbamidomethyl (C))LY_ REV__ENSG00000136367|ENST00000419474|ZFHX2 1.4819007175156935 0.4761840153648598 3 S 1 -1 10.242 0.0 0.0 0.6798 0.0 0.0 1238.5433744721456 178.05133997135002 1416.5947144434956 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 S 0.6798 - 12 + 1 1.98 29445.7 0.5799999833106995 1877 5068 6945 HBL1_DMSO_200M_050219_1,6947 HBL1_DMSO_200M_050219_1,6947,DFAMKCQRCLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6948 36.446 18.0 3761700.0 25 0 324570.0 + 34799 SQEGRPVQV 9 102 500.2644937104114 998.5144344876228 2 500.2646667361259 MULTI CID FTMS 0 0 0 6945 2934464.25 0.1549569098897561 -2 0.0737648010253906 3 Unmodified _SQEGRPVQV_ ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 110.5527297667825 0.0053998527608258 3 {[QS]|[NT]}EGRPVQV 9 0 + 60.921 0.0 0.0 6.1011 6.1011 88.014 0.0 0.0 0.0 7.248797058519223 34.66927431814564 7.248797058519223 9.208187539523747 0 2.4049471895720984 1.0457574905606752 0.2887254899964357 0.6747425010840047 + + {[QS]|[NT]}EGRPVQV;{[QS]|[NT]}EGRPV[AG]V;{[QS]|[NT]}{I|L}{I|L}RGYY;{[QS]|[NT]}EGRQ[VP]V;E{[QS]|[NT]}GRPVQV;{[QS]|[NT]}{I|L}{I|L}[VG]GYY;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]RGYY;[VP]Q{[NV]|[RG]}ESQV;[VP]Q[WK]DQV;{[QV]|[N{I|L}]|[RA]|[KV]}P{[NV]|[RG]}ESQV 6.1011;5.1789;5.115;4.6768;4.6328;4.1874;2.4742;2.3717;2.1619;2.0495 +;-;-;-;-;-;-;-;-;- + 521 1 1.98 60189.2 1.0 1878 5068 6945 HBL1_DMSO_200M_050219_1,6948 HBL1_DMSO_200M_050219_1,6948,SQEGRPVQV True True SQEGRPVQV 36.445803 500.264666736126 440315584.0 6945.0 ENSG00000168090|ENST00000303904|COPS6;;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 6.810601552327474 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6949 36.447 22.0 3231700.0 25 0 507930.0 + 35076 SQVEGEHQL 9 91 513.7460685831627 1025.4775842331253 2 513.7463867068291 MULTI CID FTMS 0 0 0 6945 2410768.5 0.1822060966224921 -1 0.0614891052246093 4 Unmodified _SQVEGEHQL_ ENSG00000117724|ENST00000366955|CENPF 69.10491478415734 0.0214449631113747 3 {[QS]|[NT]}VE{[DA]|[EG]}H[Q{I|L}] 9 0 + 45.017 0.0 0.0 4.3899 4.3899 85.636 0.0 0.0 0.0 17.709807228558283 1.0685328122896962 1.0685328122896962 24.39170438577893 0 1.0 0.0 0.7302046884880937 1.0021934810768762 + + {[QS]|[NT]}VE{[DA]|[EG]}H[Q{I|L}];[HQ]{[DA]|[EG]}E{I|L}V{[QS]|[NT]};[HQ]{[DA]|[EG]}EV{I|L}{[QS]|[NT]};{[QS]|[NT]}V{[WT]|[RM]}{[DS]|[MA]|[CV]|TT}{[CT]|[{M(Oxidation (M))|F}G]};{[QS]|[NT]}{[QN]|[E{I|L}]|[KN]}[DG]H[Q{I|L}];[HQ]{[WN]|[YH]}Q[WK];{[QS]|[NT]}{[WT]|[RM]}V{[DS]|[MA]|[CV]|TT}{[CT]|[{M(Oxidation (M))|F}G]};{[QN]|[E{I|L}]|[KN]}[WH]Q[WK] 4.3899;2.0113;1.8422;1.4348;1.3699;0.63514;0.2824;0.11574 +;-;-;-;-;-;-;- + 409 + 1 1.98 61112.7 1.0 1879 5068 6945 HBL1_DMSO_200M_050219_1,6949 HBL1_DMSO_200M_050219_1,6949,SQVEGEHQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6950 36.45 140.0 484190.0 25 0 42668.0 -1 SKKEMLPP 8 101 473.2589306064832 0 473.2594787478447 PEAK CID FTMS 0 0 0 6945 347670.6875 0.524113248985618 -28 1.3281707763671875 5 Oxidation (M) _SKKEM(Oxidation (M))LPP_ ENSG00000172493|ENST00000395146|AFF1;nc|ENSG00000172493|P51825-3|AFF1;nc|ENSG00000172493|P51825|AFF1 5.230669730166228 0.5807325378471833 3 W 1 -1 5.3567 0.0 0.0 0.56714 0.0 0.0 472.27285281277256 283.11908899478755 755.3919418075601 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 W 0.56714 - 1 + 1 1.98 57187.1 1.0 1880 5068 6945 HBL1_DMSO_200M_050219_1,6950 HBL1_DMSO_200M_050219_1,6950,SKKEMLPP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6951 36.453 151.0 627810.0 25 0 47239.0 + 25058 MPVGPNAHKV 10 129 350.5235363385141 1048.5487796157422 3 350.5232116580009 MULTI CID FTMS 0 0 0 6945 358065.03125 0.1051733793574221 -4 0.2084236145019531 6 Unmodified _MPVGPNAHKV_ ENSG00000087365|ENST00000322535|SF3B2 27.628801355627647 0.3479284626772844 3 MPVG[NP]AHKV 10 0 + 44.076 0.0 0.0 4.2035 4.2035 78.673 0.0 0.0 0.0 7.912488223001418 3.224835064522168 3.224835064522168 6.250300164576295 0 0.0 0.8239087409443188 0.0 0.3807196863200844 + + MPVG[NP]AHKV;MPVG[{I|L}T]{[RE]|[WV]}{M(Oxidation (M))|F};MPVV[TA]{[RE]|[WV]}{M(Oxidation (M))|F};MPR[{I|L}T]T{M(Oxidation (M))|F}[{I|L}A];[VP]G{M(Oxidation (M))|F}{M(Oxidation (M))|F}G[KA]{[QV]|[N{I|L}]|[RA]|[KV]};MPR[{I|L}T]{[RE]|[WV]}{M(Oxidation (M))|F};[VP]G{M(Oxidation (M))|F}{M(Oxidation (M))|F}[KQ]{[QV]|[N{I|L}]|[RA]|[KV]};M[{I|L}T]VGV[WP]{M(Oxidation (M))|F};M[{I|L}T]VR[WP]{M(Oxidation (M))|F};M[{I|L}T]VRV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S 4.2035;3.6074;3.5101;3.3442;2.7973;2.6265;2.1744;1.7043;1.5415;1.3295 +;-;-;-;-;-;-;-;-;- + 431 + 1 1.98 85888.0 1.0 1881 5068 6945 HBL1_DMSO_200M_050219_1,6951 HBL1_DMSO_200M_050219_1,6951,MPVGPNAHKV False True MPVGPNAHKV 36.452786 350.523211658001 65944130.0 6945.0 ENSG00000087365|ENST00000322535|SF3B2 6.676289717356364 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6952 36.456 145.0 645070.0 25 0 65713.0 + 44792 YPMPADQRRHV 11 79 457.230789769195 1368.670539907785 3 457.2307311892509 MULTI CID FTMS 0 0 0 6945 338604.84375 0.5777316614730283 -1 0.0614891052246093 7 Unmodified _YPMPADQRRHV_ ENSG00000110497|ENST00000683756|AMBRA1;nc|ENSG00000110497|Q9C0C7-2|AMBRA1;nc|ENSG00000110497|Q9C0C7-3|AMBRA1;nc|ENSG00000110497|Q9C0C7-4|AMBRA1;nc|ENSG00000110497|Q9C0C7-5|AMBRA1 19.986897341741983 0.6193965116009005 3 YPMV 4 7 52.423 0.0 0.0 3.8302 0.0 0.0 0.0 875.4248998966092 875.4248998966092 41.82681828660536 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 YPMV 3.8302 - 59 + 1 1.98 77037.0 1.0 1882 5068 6945 HBL1_DMSO_200M_050219_1,6952 HBL1_DMSO_200M_050219_1,6952,YPMPADQRRHV False True YPMPADQRRHV 36.455691 457.230731189251 3176061.75 6945.0 nc|ENSG00000110497|Q9C0C7-2|AMBRA1;;nc|ENSG00000110497|Q9C0C7-5|AMBRA1;;nc|ENSG00000110497|Q9C0C7-4|AMBRA1;;ENSG00000110497|ENST00000683756|AMBRA1;;nc|ENSG00000110497|Q9C0C7-3|AMBRA1 9.152812639872232 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6953 36.461 302.0 216990.0 25 0 17534.0 + 39110 TWTEKVAA 8 114 453.2410904296387 904.4676279260774 2 453.2411987185478 MULTI CID FTMS 0 0 0 6945 266333.5 1.0 0 0.0 8 Unmodified _TWTEKVAA_ REV__ENSG00000171155|ENST00000304661|C1GALT1C1 23.1484247019978 0.5573009939494978 3 {[DA]|[EG]}[MT]VKVAA 9 -1 {[DA]|[EG]}[MT]VKV + + 20.445 6.9614 0.93519 2.2605 2.2605 49.086 0.0 0.0 0.0 0.0 7.971062485323515 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[DA]|[EG]}[MT]VKVAA 2.2605 - 182 + 1 1.98 55666.2 1.0 1883 5068 6945 HBL1_DMSO_200M_050219_1,6953 HBL1_DMSO_200M_050219_1,6953,TWTEKVAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6954 36.465 215.0 460450.0 25 0 24446.0 + 234 AAVRDISEA 9 130 466.2462268697885 930.4779008063772 2 466.2469055056572 MULTI CID FTMS 0 0 0 6945 158964.5625 0.0184738803030112 -3 0.1289100646972656 9 Unmodified _AAVRDISEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF 66.45667989310934 0.0225072657982126 3 AAVRD{I|L}SEA 9 0 + 56.552 0.0 0.0 6.0778 6.0778 89.718 0.0 0.0 0.0 13.297145103202809 37.16248397201599 13.297145103202809 12.972287753157516 0 1.5 1.3010299956639813 0.5 0.0 + + AAVRD{I|L}SEA;AAVR{[TV]|[{I|L}S]}DEA;[Q{I|L}]RD{I|L}SEA;[TP][WK]{I|L}SEA;AAV{M(Oxidation (M))|F}AP[VG]EA;AAV{M(Oxidation (M))|F}{I|L}[NP]EA;AAV{M(Oxidation (M))|F}AP[DV]AA;{[MG]|[TS]}[{I|L}A]RPSEA;[Q{I|L}]R{[TV]|[{I|L}S]}DEA;{[ES]|[DT]|[{I|L}C]}A[R{I|L}][VG]EA 6.0778;4.6836;4.1972;3.1827;3.1265;3.0716;2.8579;2.8245;2.803;2.6868 +;-;-;-;-;-;-;-;-;- + 1313 1 1.98 80522.9 1.0 1884 5068 6945 HBL1_DMSO_200M_050219_1,6954 HBL1_DMSO_200M_050219_1,6954,AAVRDISEA True True AAVRDISEA 36.465272 466.246905505657 82280904.0 6945.0 ENST00000465478.1_1_8:93156318-93156576:-|nuORF;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;;ENST00000471178.2_1_19:35024355-35024547:-|nuORF 4.471637010574341 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6955 36.472 355.0 193880.0 25 0 24389.0 + 38144 GGGGGLGSGGSIR 13 108 516.2638754806419 1030.5131980280837 2 516.2646972537041 MULTI CID FTMS 0 0 0 6945 158445.640625 1.0 0 0.0 10 Unmodified _TPMWGRQR_ ENSG00000171403|ENST00000246662|KRT9;P35527 12.531546534597751 0.7257836412119636 3 {I|L}GS 3 7 21.198 0.0 0.0 2.057 0.0 0.0 285.1068734828851 485.2475985162719 770.354471999157 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 {I|L}GS 2.057 - 202 + 1 1.98 57705.7 1.0 1885 5068 6945 HBL1_DMSO_200M_050219_1,6955 HBL1_DMSO_200M_050219_1,6955,TPMWGRQR False False GGGGGLGSGGSIR 36.471695 516.264697253704 1475988.125 6945.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 4.424664656321208 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6956 36.486 800.0 209800.0 25 0 13547.0 + + 8081 GGGGGGLGSGGSIR 14 186 544.2730064647036 1086.531459996207 2 544.7753173708916 MULTI CID FTMS 0 0 0 6945 154883.53125 0.4982856539638974 -2 0.0737648010253906 11 Unmodified _EPDLTDNKR_ ENSG00000171403|ENST00000246662|KRT9;P35527 17.11289562659939 0.3734572693229295 3 [EP]QDT[WK]A{I|L} 9 -1 + 38.655 0.0 0.0 3.5576 3.5576 73.031 0.0 0.0 0.0 22.79122910014245 1.9239397084739167 1.9239397084739167 3.0102999566398125 0 0.1237125054200235 0.8538719643217619 0.0 0.3807196863200844 [EP]QDT[WK]A{I|L};[EP]DQT[WK]A{I|L};[EP]D{I|L}GSG[RK]E;[EP][AG]DT[WK]A{I|L};[EP]D[AG]T[WK]A{I|L};[EP]D{I|L}GKK[WD];{[{M(Oxidation (M))|F}H]|[RQ]}GQT[WK]A{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}G{I|L}GSG[RK]E;[EP]D{I|L}[YV][KS]H;[EP]D{I|L}[NS][RK]E 3.5576;3.2806;3.2151;2.7102;2.4331;2.3414;2.0305;1.965;1.7367;1.6043 -;-;-;-;-;-;-;-;-;- 2644 + 1 1.98 126281.6 0.8100000023841858 1886 5068 6945 HBL1_DMSO_200M_050219_1,6956 HBL1_DMSO_200M_050219_1,6956,EPDLTDNKR False False GGGGGGLGSGGSIR 36.48553 544.775317370892 3565824.75 6945.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 4.364327271779378 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6957 36.491 219.0 264710.0 25 0 61432.0 + 34789 SQDPGTHVV 9 93 470.23010219428033 938.4456514553608 2 470.2296935915947 MULTI CID FTMS 0 0 0 6945 137978.453125 0.0052317806873085 61 -3.364501953125 12 Unmodified _SQDPGTHVV_ ENSG00000130935|ENST00000253247|NOL11 14.838274106304384 0.4350285940865338 3 {[QS]|[NT]}D 3 6 22.319 0.0 0.0 2.3783 0.0 0.0 0.0 605.306069506395 605.306069506395 9.55518379955958 0.0 0.0 0.0 0 0.5 0.0 0.0 0.6861818737241735 + {[QS]|[NT]}D 2.3783 + + 57 1 1.98 52989.4 1.0 1887 5068 6945 HBL1_DMSO_200M_050219_1,6957 HBL1_DMSO_200M_050219_1,6957,SQDPGTHVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6958 36.498 429.0 212150.0 25 0 19378.0 + + -1 GGGGGGGLGSGGSIR 15 113 573.2870033694741 0 573.2884399294853 PEAK CID FTMS 0 0 0 6945 95629.8671875 0.5858134217955914 -1 0.0614891052246093 13 Carbamidomethyl (C) _NNGLNC(Carbamidomethyl (C))IDLI_ ENSG00000171403|ENST00000246662|KRT9;P35527 16.149105407346934 0.3281668441439271 3 GGGG{I|L}GSG 8 -1 54.774 0.0 0.0 4.7856 0.0 0.0 171.06880546766052 428.2259920709594 599.29479753862 0.0 0.0 0.0 0.0 0 1.555462187404089 0.0 0.25 0.0 GGGG{I|L}GSG 4.7856 - 506 + 1 1.98 72453.1 1.0 1888 5068 6945 HBL1_DMSO_200M_050219_1,6958 HBL1_DMSO_200M_050219_1,6958,NNGLNCIDLI False False GGGGGGGLGSGGSIR 36.498491 573.288439929485 974351.5625 6945.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 6.055859088897705 2.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6959 36.512 800.0 124750.0 25 0 15775.0 -1 PLVSEEDMVT 10 120 568.2639469404995 0 568.2657348513603 PEAK CID FTMS 0 0 0 6945 115374.25 1.0 0 0.0 14 Oxidation (M) _PLVSEEDM(Oxidation (M))VT_ ENSG00000169877|ENST00000302312|AHSP;ENST00000569954.1_1_16:31539246-31540009:+|nuORF 14.838274106304384 0.3381107837965078 3 PV 2 -1 12.519 0.0 0.0 1.1034 0.0 0.0 113.07816492377954 822.2900325201961 935.3681974439756 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 PV 1.1034 - 104 + 1 1.98 80113.3 0.5899999737739563 1889 5068 6945 HBL1_DMSO_200M_050219_1,6959 HBL1_DMSO_200M_050219_1,6959,PLVSEEDMVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6960 36.526 800.0 41374.0 25 0 4038.5 -1 0 48 629.0916185636457 0 629.2890502810478 PEAK CID FTMS 0 0 0 6945 79289.9453125 1.0 0 0.0 15 3 D 1 -1 3.0989 0.0 0.0 0.2467 0.0 0.0 429.8099328286601 708.2967012994749 1138.106634128135 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.2467 - 4 + 1 1.98 35008.1 0.5699999928474426 1890 5068 6945 HBL1_DMSO_200M_050219_1,6960 HBL1_DMSO_200M_050219_1,6960, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6962 36.53 5.8 7854400.0 25 0 941400.0 + 28 AAAPPAKEI 9 65 434.25035221775966 866.4861515023193 2 434.2504455447197 MULTI CID FTMS 0 0 0 6961 10620016.0 0.7569135251120295 2 -0.1329383850097656 1 Unmodified _AAAPPAKEI_ ENSG00000166851|ENST00000300093|PLK1 13.90604991867851 0.4602628045680013 3 AAA 3 6 30.942 0.0 0.0 3.571 0.0 0.0 0.0 650.351528659799 650.351528659799 -0.4845500650402812 0.0 -0.4845500650402812 0.0 0 0.5 1.6989700043360187 0.0 0.0 + AAA 3.571 + + 57 1 1.971 42131.7 1.0 1891 5069 6961 HBL1_DMSO_200M_050219_1,6962 HBL1_DMSO_200M_050219_1,6962,AAAPPAKEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6963 36.532 41.0 1321800.0 25 0 98179.0 + 28900 QAPPPPQQV 9 92 481.2587808144996 960.5030086957992 2 481.2586852908134 MULTI CID FTMS 0 0 0 6961 1584825.5 0.1269980251035027 21 -0.8158187866210938 2 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 88.90359156742426 0.0153595091083554 3 [QA]PPP[QP]QV 9 0 + 59.954 0.0 0.0 6.2419 6.2419 77.17 0.0 0.0 0.0 34.75969482523921 10.071837567538182 10.071837567538182 0.4575749056067479 0 1.5189301784845295 1.6989700043360187 0.0 1.048455006504028 + + [QA]PPP[QP]QV;[QA]PPP[PA]GQV;[QA]PPP[QP][AG]V;[QA]PPP[PA]G[AG]V;[QA][YK][QP]QV;[QA][YK][PA]GQV 6.2419;6.1943;4.841;4.1486;2.7263;2.673 +;-;-;-;-;- + 656 + 1 1.971 44690.6 1.0 1892 5069 6961 HBL1_DMSO_200M_050219_1,6963 HBL1_DMSO_200M_050219_1,6963,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6964 36.533 51.0 1091600.0 25 0 64427.0 + 25061 MPVGPNAHKV 10 90 525.2816280204237 1048.5487031076473 2 525.2817870974541 MULTI CID FTMS 0 0 0 6961 1167278.5 0.5981944807176672 -2 0.1632843017578125 3 Unmodified _MPVGPNAHKV_ ENSG00000087365|ENST00000322535|SF3B2 43.85829265575387 0.1168243637355526 3 MPVKA[Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]} 9 6 + 59.786 0.0 0.0 5.7018 5.7018 88.059 0.0 0.0 0.0 21.069784709252453 0.3032698445121795 0.3032698445121795 11.13554504413873 0 0.8807196863200843 1.6989700043360187 1.1549471895720984 0.0 MPVKA[Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]};MPVKA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{I|L}P];M[{I|L}T]R{[QS]|[NT]}[WK];M[{I|L}T]K{[QD]|[EN]|[WG]|[KD]|[RS]}[WK] 5.7018;4.6398;0.55922;0.27212 -;-;-;- 279 + 1 1.971 52761.9 1.0 1893 5069 6961 HBL1_DMSO_200M_050219_1,6964 HBL1_DMSO_200M_050219_1,6964,MPVGPNAHKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6965 36.535 80.0 714650.0 25 0 127800.0 + 3795 DAIENKTTV 9 79 495.75891198640414 989.5032710396084 2 495.7589904665947 MULTI CID FTMS 0 0 0 6961 927800.75 0.2365098761848346 -3 0.1755599975585937 4 Unmodified _DAIENKTTV_ ENSG00000130119|ENST00000360845|GNL3L 47.594388314883695 0.0456443387682827 3 {[DA]|[EG]}{I|L}EN[KT]TV 9 0 + 68.606 0.0 0.0 6.9334 6.9334 90.643 0.0 0.0 0.0 24.25460287663803 12.98332479720628 12.98332479720628 9.208187539523747 0 1.5994850021680094 2.0 0.6747425010840047 0.0 + + {[DA]|[EG]}{I|L}EN[KT]TV;{[DA]|[EG]}{I|L}EGG[KT]TV;{[DA]|[EG]}{I|L}[VP][{M(Oxidation (M))|F}E]TV;{[DA]|[EG]}[KG]TT[TP]{[TV]|[{I|L}S]};{[DA]|[EG]}[YR][RN]PV;{[QN]|[E{I|L}]|[KN]}GHH[TP]{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}{[ET]|[MV]}T[TP]{[TV]|[{I|L}S]};{[SA]|[TG]}{[NV]|[RG]}TT[TP]{[TV]|[{I|L}S]};{[SA]|[TG]}[KG]ET[TP]{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}{[ET]|[MV]}[W{I|L}]{[TV]|[{I|L}S]} 6.9334;6.0028;5.6224;3.9531;2.3367;2.2308;2.0542;1.9835;1.5542;1.3505 +;-;-;-;-;-;-;-;-;- + 420 + 1 1.971 49958.3 1.0 1894 5069 6961 HBL1_DMSO_200M_050219_1,6965 HBL1_DMSO_200M_050219_1,6965,DAIENKTTV True True DAIENKTTV 36.534807 495.7597 37848316.0 6961.0 ENSG00000130119|ENST00000360845|GNL3L 6.701128800710042 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6966 36.536 61.0 966740.0 25 0 98889.0 + 33244 SFPASSGVSH 10 79 488.2303025289275 974.446052124655 2 488.2303344607353 MULTI CID FTMS 0 0 0 6961 753261.9375 0.5198662362065308 -19 0.8523483276367188 5 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 65.23502041540118 0.0228537820337083 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH 10 0 + 86.085 0.0 0.0 8.8343 8.8343 98.23 0.0 0.0 0.0 55.48816104664928 14.146518864155126 14.146518864155126 40.17703947296253 0 0.3054621874040891 2.0 1.4436726795685342 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YV]EPH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[YV]PDT;[PA]S[KS]DH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[VG][WE][PG];[PA]S[MT][RP]DT;{[QN]|[E{I|L}]|[KN]}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 8.8343;4.7112;4.5259;3.7242;2.4255;2.3687;2.0944;2.0112;0.90259 +;-;-;-;-;-;-;-;- + 261 + 1 1.971 51822.9 1.0 1895 5069 6961 HBL1_DMSO_200M_050219_1,6966 HBL1_DMSO_200M_050219_1,6966,SFPASSGVSH True True SFPASSGVSH 36.536298 488.230334460735 748215952.0 6961.0 MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant;;ENSG00000160294|ENST00000291688|MCM3AP 7.472532908121745 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6967 36.539 158.0 344360.0 25 0 57836.0 + 2922 AVGPVHNSV 9 73 440.2376905080105 878.460828082821 2 440.2375366091728 MULTI CID FTMS 0 0 0 6961 371030.15625 0.1071269293911902 2 -0.1329383850097656 6 Unmodified _AVGPVHNSV_ ENSG00000115760|ENST00000421745|BIRC6 18.1463463914782 0.3454829746528889 3 {[VA]|[{I|L}G]}W 3 7 33.2 0.0 0.0 3.7793 0.0 0.0 0.0 519.2526339166624 519.2526339166624 20.62006153282028 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[VA]|[{I|L}G]}W 3.7793 - 83 + 1 1.971 46652.4 1.0 1896 5069 6961 HBL1_DMSO_200M_050219_1,6967 HBL1_DMSO_200M_050219_1,6967,AVGPVHNSV False True AVGPVHNSV 36.539407 440.237536609173 29364270.0 6961.0 ENSG00000115760|ENST00000421745|BIRC6 6.194045861562093 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6968 36.542 130.0 683790.0 25 0 68978.0 + -1 IPAPQSRNV 9 80 491.2772642218144 980.5399755104288 2 491.2756530642509 MULTI CID FTMS 0 0 0 6961 334466.28125 0.138294097988662 -3 0.1755599975585937 7 Carbamidomethyl (C) _IPAPTILPC(Carbamidomethyl (C))_ ENSG00000189266|ENST00000334351|PNRC2 21.74664581756881 0.2544899275067181 3 {I|L}PAPQ 5 -1 57.691 0.0 0.0 5.8836 0.0 0.0 0.0 471.2330416315063 471.2330416315063 47.69077524932108 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 {I|L}PAPQ 5.8836 - 83 + 1 1.971 71821.2 1.0 1897 5069 6961 HBL1_DMSO_200M_050219_1,6968 HBL1_DMSO_200M_050219_1,6968,IPAPTILPC False False IPAPQSRNV 36.542059 491.275653064251 24665794.0 6961.0 ENSG00000189266|ENST00000334351|PNRC2 4.487699508666992 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6969 36.556 800.0 115770.0 25 0 22491.0 -1 0 48 1166.4779186691794 3496.4119266077387 3 1166.813159167767 MULTI CID FTMS 0 0 0 6961 272780.8125 1.0 0 0.0 8 3 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.27068 0.0 0.0 1797.628797800901 1491.6936771540068 3289.322474954908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.27068 - 15 + 1 1.971 77714.1 0.7699999809265137 1898 5069 6961 HBL1_DMSO_200M_050219_1,6969 HBL1_DMSO_200M_050219_1,6969, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6970 36.57 800.0 155850.0 25 0 38074.0 -1 0 47 1110.4391796399389 3328.2957095200168 3 1110.773852527142 MULTI CID FTMS 0 0 0 6961 237797.40625 1.0 0 0.0 9 3 N 1 -1 8.0989 0.0 0.0 0.24334 0.0 0.0 2481.9251385020625 729.3077486627561 3211.2328871648187 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 N 0.24334 - 126 + 1 1.971 108705.0 0.7400000095367432 1899 5069 6961 HBL1_DMSO_200M_050219_1,6970 HBL1_DMSO_200M_050219_1,6970, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6971 36.584 799.0 314510.0 25 0 41685.0 -1 PTIPFNLMK 9 164 538.7922436133879 1075.5699342935757 2 538.7917968630791 MULTI CID FTMS 0 0 0 6961 227752.828125 0.4498055516227546 -5 0.3102188110351562 10 Oxidation (M) _PTIPFNLM(Oxidation (M))K_ ENSG00000149256|ENST00000278550|TENM4 34.40172386719151 0.1061884637610825 3 KTT[{I|L}P]T[HS]K 9 -1 57.611 0.0 0.0 5.3563 0.0 0.0 63.99753617570304 0.0 63.99753617570304 0.0 27.53948566795808 0.0 0.0 0 1.75 0.0 1.774227503252014 0.3494850021680094 KTT[{I|L}P]T[HS]K 5.3563 - 3215 + 1 1.971 192574.4 1.0 1900 5069 6961 HBL1_DMSO_200M_050219_1,6971 HBL1_DMSO_200M_050219_1,6971,PTIPFNLMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6972 36.597 800.0 148960.0 25 0 11443.0 + -1 GSGNAYYIMKL 11 125 616.8019551726712 1231.5893574121424 2 616.8022949099541 MULTI CID FTMS 0 0 0 6961 197943.0625 1.0 0 0.0 11 Oxidation (M) _GSGNAYYIM(Oxidation (M))KL_ REV__ENST00000429033.1_1_21:32434669-32435362:-|nuORF 19.361941925380144 0.6323962752489956 3 [SG]GGGGGG{I|L}GSG 12 -1 80.956 0.0 0.0 6.5733 0.0 0.0 0.0 428.2273348443969 428.2273348443969 53.40489127129214 0.0 0.0 0.0 0 1.440331689179039 0.6989700043360187 0.0 0.0 [SG]GGGGGG{I|L}GSG 6.5733 - 5866 + 1 1.971 91445.4 0.8899999856948853 1901 5069 6961 HBL1_DMSO_200M_050219_1,6972 HBL1_DMSO_200M_050219_1,6972,GSGNAYYIMKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6973 36.611 800.0 125740.0 25 0 18366.0 -1 WYKECRTKTWR 11 96 807.4035242681838 1612.7924956031677 2 807.4042236208916 MULTI CID FTMS 0 0 0 6961 148920.40625 1.0 0 0.0 12 Carbamidomethyl (C) _WYKEC(Carbamidomethyl (C))RTKTWR_ ENSG00000169306|ENST00000378993|IL1RAPL1 0.0 0.8751479354844584 3 KNV 3 -1 10.688 0.0 0.0 0.66268 0.0 0.0 773.3042276361738 495.2588595026001 1268.563087138774 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.25 KNV 0.66268 - 53 + 1 1.971 75230.3 0.699999988079071 1902 5069 6961 HBL1_DMSO_200M_050219_1,6973 HBL1_DMSO_200M_050219_1,6973,WYKECRTKTWR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6975 36.626 648.0 132630.0 25 0 12763.0 -1 ASNDYTQQATQ 11 109 634.7729767980261 1267.531400662852 2 634.7734252810478 MULTI CID FTMS 0 0 0 6974 79448.1484375 0.0953503095394312 3 -0.139739990234375 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNDYTQQATQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 23.78978130925829 0.5336113198261219 3 TQ 2 -1 32.959 0.0 0.0 2.6002 0.0 0.0 1020.4139365288662 0.0 1020.4139365288662 0.0 15.144687573382424 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.8494850021680094 TQ 2.6002 + + 464 + 1 1.969 67987.9 1.0 1903 5070 6974 HBL1_DMSO_200M_050219_1,6975 HBL1_DMSO_200M_050219_1,6975,ASNDYTQQATQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6976 36.627 34.0 1477400.0 25 0 223650.0 + 37851 TLVANPNRL 9 70 333.1981946062847 996.572754419054 3 333.1978637576103 MULTI CID FTMS 0 0 0 6974 1375693.75 1.0 0 0.0 2 Unmodified _TLVANPNRL_ REV__ENSG00000145703|ENST00000274364|IQGAP2 13.90604991867851 0.4602628045680013 3 TPR{I|L} 4 -1 31.23 0.0 0.0 3.1337 0.0 0.0 511.286912986525 0.0 511.286912986525 0.0 16.965175419594658 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 TPR{I|L} 3.1337 - 39 1 1.969 48279.6 1.0 1904 5070 6974 HBL1_DMSO_200M_050219_1,6976 HBL1_DMSO_200M_050219_1,6976,TLVANPNRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6977 36.631 226.0 458670.0 25 0 45003.0 + + 41227 VPPPPPSKV 9 113 459.2764221568175 916.538291380435 2 459.2745544314384 MULTI CID FTMS 0 0 0 6974 232915.421875 0.6623254055283733 1 -0.0477981567382812 3 Unmodified _VPFPLVFV_ ENSG00000140534|ENST00000268138|TICRR;nc|ENSG00000140534|Q7Z2Z1-2|TICRR 17.086550045450526 0.6584923310065985 3 VPPP 4 -1 57.265 0.0 0.0 6.248 0.0 0.0 0.0 523.2883576557304 523.2883576557304 44.104118210079136 0.0 0.0 0.0 0 0.5326920700672559 2.0 0.0 0.0 VPPP 6.248 - 103 + 1 1.969 86143.9 1.0 1905 5070 6974 HBL1_DMSO_200M_050219_1,6977 HBL1_DMSO_200M_050219_1,6977,VPFPLVFV False False VPPPPPSKV 36.631413 459.2769 42742857.0 6974.0 ENSG00000140534|ENST00000268138|TICRR;;nc|ENSG00000140534|Q7Z2Z1-2|TICRR 6.158120791117351 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6978 36.645 800.0 112960.0 25 0 11901.0 + -1 SWCWRLWHWYQ 11 101 569.9255692580149 0 569.9250366091728 PEAK CID FTMS 0 0 0 6974 154949.8125 1.0 0 0.0 4 Carbamidomethyl (C) _SWC(Carbamidomethyl (C))WRLWHWYQ_ REV__ENST00000513055.1_1_5:92921088-92921313:-|nuORF 0.0 0.4761840153648598 3 TN 2 -1 9.9485 0.0 0.0 0.87433 0.0 0.0 749.6938986705235 170.02846704654533 919.7223657170688 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 TN 0.87433 - 25 + 1 1.969 73135.1 0.800000011920929 1906 5070 6974 HBL1_DMSO_200M_050219_1,6978 HBL1_DMSO_200M_050219_1,6978,SWCWRLWHWYQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6979 36.659 800.0 76493.0 25 0 4778.0 -1 0 68 874.8428665052567 4369.177950193283 5 875.2442504763603 MULTI CID FTMS 0 0 0 6974 124463.0703125 0.4820681352038301 3 -0.139739990234375 5 3 PPG 3 -1 16.198 0.0 0.0 0.37073 0.0 0.0 2665.359361088061 1449.6774424013431 4115.0368034894045 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPG 0.37073 - 27 + 1 1.969 52407.4 0.6100000143051147 1907 5070 6974 HBL1_DMSO_200M_050219_1,6979 HBL1_DMSO_200M_050219_1,6979, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6981 36.665 180.0 404750.0 25 0 66800.0 + 4194 DAPKAGQL 8 103 400.2187291386705 798.422905344141 2 400.2189208865166 MULTI CID FTMS 0 0 0 6980 310983.75 0.2673859955070787 2 -0.0919418334960937 1 Unmodified _DAPKAGQL_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 23.1484247019978 0.5573009939494978 3 {[DA]|[EG]}PD[R{I|L}]{I|L} 7 4 + 38.02 0.0 0.0 4.7619 4.7619 86.518 0.0 0.0 0.0 24.040616466225444 7.250094805818321 7.250094805818321 20.95822917366842 0 0.3807196863200844 2.0 0.0 0.4247425010840047 {[DA]|[EG]}PD[R{I|L}]{I|L};{[DA]|[EG]}{[QN]|[E{I|L}]|[KN]}[RV]P;{[SA]|[TG]}[Q{I|L}][VP]{[QG]|[NA]};[KP]A{[DA]|[EG]}{I|L}{[QG]|[NA]};[VP]{[QG]|[NA]}T{I|L}{[QG]|[NA]} 4.7619;2.1369;0.9189;0.89089;0.34461 -;-;-;-;- 74 + 1 1.969 62957.0 1.0 1908 5071 6980 HBL1_DMSO_200M_050219_1,6981 HBL1_DMSO_200M_050219_1,6981,DAPKAGQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6982 36.678 800.0 225090.0 25 0 22102.0 -1 MCSRRDKCQQ 10 156 437.863576720333 1310.568900761199 3 437.8634216189384 MULTI CID FTMS 0 0 0 6980 60656.09375 0.1688403871421755 23 -0.7795791625976562 2 Carbamidomethyl (C) _MC(Carbamidomethyl (C))SRRDKCQQ_ ENSG00000076356|ENST00000367033|PLXNA2 5.783430956126388 0.6998847395148697 3 SPM 3 -1 21.031 0.0 0.0 1.6047 0.0 0.0 977.4336353535008 0.0 977.4336353535008 0.0 6.416506143517749 0.0 0.0 0 0.5 0.0 0.0 0.0 SPM 1.6047 - 109 1 1.969 142591.2 0.800000011920929 1909 5071 6980 HBL1_DMSO_200M_050219_1,6982 HBL1_DMSO_200M_050219_1,6982,MCSRRDKCQQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6983 36.681 150.0 498170.0 25 0 22270.0 + 44509 YPCTEQTAF 9 98 530.2280718387927 1058.4415907443854 2 530.2281371951103 MULTI CID FTMS 0 0 0 6980 448252.59375 0.2535691274514781 -6 0.3636436462402344 3 Unmodified _YPCTEQTAF_ REV__ENSG00000156521|ENST00000287078|TYSND1 29.081581746732265 0.1611639662936252 3 [HD]EAQQNA{M(Oxidation (M))|F} 9 -1 + 93.329 0.0 0.0 8.8176 8.8176 94.282 0.0 0.0 0.0 16.355830254716253 55.70468618756989 16.355830254716253 9.208187539523747 0 0.8494850021680094 0.9208187539523752 1.0501648626366045 0.75 [HD]EAQQNA{M(Oxidation (M))|F};[HD]EAQQGGA{M(Oxidation (M))|F};[HD]EA[AG]QNA{M(Oxidation (M))|F};[HD]EAQ[AG]NA{M(Oxidation (M))|F};[HD]EAQ[AG]GGA{M(Oxidation (M))|F};[HD]EA[AG]QGGA{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQNA{M(Oxidation (M))|F};[HD]EA[AG][AG]NA{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQGGA{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQ[AG]NA{M(Oxidation (M))|F} 8.8176;7.9476;7.9476;7.9476;7.0818;7.0818;7.0461;6.6805;6.1761;6.1761 -;-;-;-;-;-;-;-;-;- 381 1 1.969 62188.2 1.0 1910 5071 6980 HBL1_DMSO_200M_050219_1,6983 HBL1_DMSO_200M_050219_1,6983,YPCTEQTAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6984 36.695 800.0 266970.0 25 0 19389.0 + + 20583 GVLAGHDNRV 10 257 346.5212298165844 1036.5418600499531 3 346.4949218630791 MULTI CID FTMS 0 0 0 -1 0 4 Unmodified _LLNVVMYW_ ENSG00000078369|ENST00000378609|GNB1;nc|ENSG00000078369|P62873-2|GNB1;nc|ENSG00000172354|P62879-2|GNB2;ENSG00000172354|ENST00000303210|GNB2;ENSG00000114450|ENST00000232564|GNB4 10.183394434864962 0.7604730176254005 3 [R{I|L}]AGHRNDV 9 -1 + 32.924 0.0 0.0 3.1763 3.1763 76.306 0.0 0.0 0.0 15.556077870225424 0.8084853550672193 0.8084853550672193 6.478174818886373 0 0.0 0.0 0.3494850021680094 0.0 [R{I|L}]AGHRNDV;[R{I|L}]QHRNDV;[R{I|L}]AGHRGGDV;[R{I|L}]AGH[VG]NDV;[R{I|L}]AGH[VG][DG]R;[R{I|L}]AGHD[RN]V;[R{I|L}]AGHD{[NV]|[RG]}R;[R{I|L}]QHRGGDV;[R{I|L}]QH[VG]NDV;[R{I|L}]QH[VG][DG]R 3.1763;2.5513;2.288;2.288;2.0787;1.9855;1.7093;1.6578;1.6578;1.4485 -;-;-;-;-;-;-;-;-;- 618 + 1 1.969 170128.7 0.5299999713897705 1911 5071 6980 HBL1_DMSO_200M_050219_1,6984 HBL1_DMSO_200M_050219_1,6984,LLNVVMYW False False GVLAGHDNRV 36.695264 346.494921863079 422934.78125 6980.0 ENSG00000078369|ENST00000378609|GNB1;;nc|ENSG00000078369|P62873-2|GNB1;;nc|ENSG00000172354|P62879-2|GNB2;;ENSG00000172354|ENST00000303210|GNB2;;ENSG00000114450|ENST00000232564|GNB4 4.526655038197835 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6986 36.7 4.8 7075700.0 25 0 715240.0 + 34800 SQEGRPVQV 9 62 500.2644937104114 998.5144344876228 2 500.2646362185478 MULTI CID FTMS 0 0 0 6985 11303940.0 0.5969142789792754 2 -0.0625381469726562 1 Unmodified _SQEGRPVQV_ ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 43.77239144664712 0.0547478964384323 3 {[QS]|[NT]}E 3 6 36.528 0.0 0.0 3.6582 0.0 0.0 0.0 651.3588308101416 651.3588308101416 22.645228064086 0.0 0.0 0.0 0 1.0 1.2218487496163564 0.2614393726401688 0.2742275032520141 + {[QS]|[NT]}E 3.6582 + + 37 1 1.969 34559.9 1.0 1912 5072 6985 HBL1_DMSO_200M_050219_1,6986 HBL1_DMSO_200M_050219_1,6986,SQEGRPVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6987 36.707 439.0 189600.0 25 0 40606.0 -1 0 92 509.21778432676587 508.2105078601659 1 509.2179138064384 MULTI CID FTMS 0 0 0 6985 103337.0703125 0.5188934865792164 -27 1.1928367614746094 2 3 {[TV]|[{I|L}S]}E 3 -1 20.725 0.0 0.0 4.078 0.0 0.0 0.0 176.0214263994815 176.0214263994815 8.250410661718881 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.0 {[TV]|[{I|L}S]}E 4.078 - 40 1 1.969 68306.2 1.0 1913 5072 6985 HBL1_DMSO_200M_050219_1,6987 HBL1_DMSO_200M_050219_1,6987, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 6988 36.71 141.0 567250.0 25 0 44819.0 + 2389 AQPARQIL 8 109 448.7690688206955 895.523584708191 2 448.7691223025322 MULTI CID FTMS 0 0 0 6985 443151.4375 0.4900872800976854 -5 0.3324241638183594 3 Unmodified _AQPARQIL_ ENSG00000114650|ENST00000265565|SCAP;nc|ENSG00000114650|Q12770-2|SCAP;nc|ENSG00000114650|Q12770-3|SCAP;nc|ENSG00000114650|Q12770-4|SCAP 18.13498045792455 0.6430038125133779 3 [QA]PAV 5 4 38.116 0.0 0.0 4.2563 0.0 0.0 0.0 426.24851404361567 426.24851404361567 27.402953031565858 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 [QA]PAV 4.2563 - 61 + 1 1.969 66048.3 1.0 1914 5072 6985 HBL1_DMSO_200M_050219_1,6988 HBL1_DMSO_200M_050219_1,6988,AQPARQIL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6989 36.716 319.0 270300.0 25 0 41565.0 + 13965 HYQTYREM 8 96 564.2504781935261 1126.486403453852 2 564.2505981326103 MULTI CID FTMS 0 0 0 6985 187895.015625 0.4480643847327371 -3 0.1691398620605468 4 Unmodified _HYQTYREM_ ENSG00000085840|ENST00000371568|ORC1 31.26834338654808 0.3863233259196171 3 HYQT 4 4 67.805 0.0 0.0 6.0192 0.0 0.0 0.0 594.2343233697874 594.2343233697874 55.10213141451892 0.0 0.0 0.0 0 1.1307196863200843 2.0 0.3807196863200844 0.4247425010840047 + HYQT 6.0192 + + 120 + 1 1.969 71197.2 1.0 1915 5072 6985 HBL1_DMSO_200M_050219_1,6989 HBL1_DMSO_200M_050219_1,6989,HYQTYREM False True HYQTYREM 36.716048 564.25059813261 1987358.375 6985.0 ENSG00000085840|ENST00000371568|ORC1 4.478501160939534 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6990 36.73 800.0 197570.0 25 0 20891.0 3708 DAFPLLSAYV 10 174 548.2878989542228 1094.5612449752457 2 548.2902709841728 MULTI CID FTMS 0 0 0 6985 130255.875 0.4858650875986431 -6 0.3446998596191406 5 Unmodified _DAFPLLSAYV_ ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF 37.97399986684836 0.1789611706409123 3 EG{M(Oxidation (M))|F}K[YR]EG 8 9 54.229 0.0 0.0 4.9544 0.0 0.0 0.0 125.07241235904532 125.07241235904532 10.818042162460609 0.0 0.0 0.0 0 0.7614393726401688 1.5228787452803376 1.4005149978319906 0.0 EG{M(Oxidation (M))|F}K[YR]EG 4.9544 - 2397 + 1 1.969 120419.2 0.7699999809265137 1916 5072 6985 HBL1_DMSO_200M_050219_1,6990 HBL1_DMSO_200M_050219_1,6990,DAFPLLSAYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6991 36.744 800.0 269230.0 25 0 16409.0 + 22192 LPQEQKAKI 9 192 527.816689638976 1053.6188263447518 2 527.8174316287041 MULTI CID FTMS 0 0 0 6985 130727.3671875 0.6835989791956452 -3 0.1691398620605468 6 Unmodified _LPQEQKAKI_ ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1 79.59630418116434 0.0176145593575188 3 {I|L}PQEQKAK{I|L} 9 0 + 66.293 0.0 0.0 6.2919 6.2919 86.682 0.0 0.0 0.0 27.517804846959702 7.4578013529460065 7.4578013529460065 7.4578013529460065 0 1.263632853717045 1.3979400086720375 0.9698565171985376 0.5891368308784531 + + {I|L}PQEQKAK{I|L};{I|L}PQEQKA{I|L}K;{I|L}P[AG]EQKAK{I|L};{I|L}PQE[AG]KAK{I|L};[QP]EQKAK{I|L}{I|L};[PA]GEQKAK{I|L}{I|L};[PA]EGQKAK{I|L}{I|L};{I|L}P[AG]EQKA{I|L}K;{I|L}PQE[AG]KA{I|L}K;{I|L}P[AG]E[AG]KAK{I|L} 6.2919;5.5841;5.418;5.418;5.1013;5.05;4.7643;4.7102;4.7102;4.5482 +;-;-;-;-;-;-;-;-;- + 3735 + 1 1.969 170372.8 0.7599999904632568 1917 5072 6985 HBL1_DMSO_200M_050219_1,6991 HBL1_DMSO_200M_050219_1,6991,LPQEQKAKI True True LPQEQKAKI 36.743712 527.817431628704 5023878.0 6985.0 ENSG00000044115|ENST00000302763|CTNNA1;;nc|ENSG00000044115|P35221-3|CTNNA1;;nc|ENSG00000044115|P35221-2|CTNNA1 4.378235658009847 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6992 36.751 405.0 195550.0 25 0 13536.0 + 19665 LGKNYYVV 8 119 478.2641126408986 0 478.2629882693291 PEAK CID FTMS 0 0 0 6985 124059.1953125 0.6683096382917618 6 -0.1380767822265625 7 Unmodified _LGKNYYVV_ REV__ENSG00000107819|ENST00000393459|SFXN3;REV__ENST00000466982.1_1_10:102799195-102799339:+|nuORF 10.183394434864962 0.5394990767616434 3 T 1 -1 8.0989 0.0 0.0 0.84849 0.0 0.0 784.4078964470332 66.03573023013905 850.4436266771722 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 T 0.84849 - 156 + 1 1.969 63803.0 1.0 1918 5072 6985 HBL1_DMSO_200M_050219_1,6992 HBL1_DMSO_200M_050219_1,6992,LGKNYYVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6994 36.755 13.0 2400200.0 25 0 186930.0 + 235 AAVRDISEA 9 60 466.2462268697885 930.4779008063772 2 466.2458984255791 MULTI CID FTMS 0 0 0 6993 3700018.0 0.4299932549494307 2 -0.0351142883300781 1 Unmodified _AAVRDISEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF 22.736283301280096 0.2418982879461534 3 DA[KP]{I|L}SEA 8 4 30.623 0.0 0.0 3.2911 0.0 0.0 101.04822737861484 0.0 101.04822737861484 0.0 13.632900219968109 0.0 0.0 0 0.3182503180159344 0.0 0.805462187404089 0.0 DA[KP]{I|L}SEA 3.2911 - 37 1 1.969 32604.8 1.0 1919 5073 6993 HBL1_DMSO_200M_050219_1,6994 HBL1_DMSO_200M_050219_1,6994,AAVRDISEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6995 36.757 29.0 1162100.0 25 0 185860.0 + 35077 SQVEGEHQL 9 67 513.7460685831627 1025.4775842331253 2 513.7462646365166 MULTI CID FTMS 0 0 0 6993 1473010.25 0.1113302450805298 4 -0.0496978759765625 2 Unmodified _SQVEGEHQL_ ENSG00000117724|ENST00000366955|CENPF 36.506200033944 0.094635877243972 3 {[QS]|[NT]}VE{I|L} 5 4 46.682 0.0 0.0 4.5523 0.0 0.0 0.0 466.1697481744751 466.1697481744751 30.48455006504028 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.4247425010840047 0.0 {[QS]|[NT]}VE{I|L} 4.5523 - 79 + 1 1.969 33801.9 1.0 1920 5073 6993 HBL1_DMSO_200M_050219_1,6995 HBL1_DMSO_200M_050219_1,6995,SQVEGEHQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6996 36.758 22.0 1873200.0 25 0 205720.0 + 25059 MPVGPNAHKV 10 79 350.5235363385141 1048.5487796157422 3 350.5233642458916 MULTI CID FTMS 0 0 0 6993 2159220.5 0.6342214317048666 1 -0.0067977905273437 3 Unmodified _MPVGPNAHKV_ ENSG00000087365|ENST00000322535|SF3B2 16.149105407346934 0.5765757077271437 3 [VP]G[WK]PGVP 9 7 42.853 0.0 0.0 4.0869 0.0 0.0 0.0 128.0164444635889 128.0164444635889 31.170912423450403 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VP]G[WK]PGVP 4.0869 - 135 1 1.969 42265.7 1.0 1921 5073 6993 HBL1_DMSO_200M_050219_1,6996 HBL1_DMSO_200M_050219_1,6996,MPVGPNAHKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 6998 36.764 227.0 240780.0 25 0 13183.0 + -1 EPRLWGGCL 9 94 544.2730064647036 1086.531459996207 2 544.2730590701103 MULTI CID FTMS 0 0 0 6997 216263.828125 0.3752242526412038 4 -0.0755386352539062 1 Carbamidomethyl (C) _EPRLWGGC(Carbamidomethyl (C))L_ REV__ENSG00000162714|ENST00000682384|ZNF496;REV__nc|ENSG00000162714|Q96IT1-2|ZNF496 18.13498045792455 0.3457906370836843 3 EPQDT[WK]A{I|L} 9 -1 + 60.328 0.0 0.0 5.5523 5.5523 86.302 0.0 0.0 0.0 35.67410004652736 11.884249941294058 11.884249941294058 9.208187539523747 0 0.0 1.3010299956639813 0.0 0.3494850021680094 EPQDT[WK]A{I|L};EP[AG]DT[WK]A{I|L} 5.5523;4.7048 -;- 231 + 1 1.969 46881.1 1.0 1922 5074 6997 HBL1_DMSO_200M_050219_1,6998 HBL1_DMSO_200M_050219_1,6998,EPRLWGGCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 6999 36.778 800.0 196100.0 25 0 15905.0 + 45143 YQDTHPERL 9 139 579.7797021384032 1157.5448513436063 2 579.7797119021416 MULTI CID FTMS 0 0 0 6997 184315.671875 0.4526944720263347 -7 0.3949623107910156 2 Unmodified _YQDTHPERL_ ENSG00000144591|ENST00000313597|GMPPA;ENST00000481170.1_1_2:220370207-220370552:+|nuORF;nc|ENSG00000144591|Q96IJ6-2|GMPPA 80.6760300276096 0.0173529540220427 3 YQDTH{I|L}{[RE]|[WV]}P 9 2 + 86.186 0.0 0.0 7.4456 7.4456 86.843 0.0 0.0 0.0 25.061668675368622 4.321355998091434 4.321355998091434 4.321355998091434 0 1.3494850021680094 1.0969100130080565 0.6109243748081782 1.2302046884880935 YQDTH{I|L}{[RE]|[WV]}P;YQDTHPE{I|L}R;YQDTH{I|L}[EP]R;YQDT{I|L}H{[RE]|[WV]}P;Y[AG]DTH{I|L}{[RE]|[WV]}P;YQDT{I|L}H[EP]R;YQD{I|L}TH{[RE]|[WV]}P;Y[AG]DTHPE{I|L}R;Y[AG]DTH{I|L}[EP]R;YQD{I|L}TH[EP]R 7.4456;7.0723;7.0623;5.9128;5.7025;5.5295;5.516;5.3292;5.3192;5.1327 -;-;-;-;-;-;-;-;-;- 1077 + 1 1.969 117505.5 0.7400000095367432 1923 5074 6997 HBL1_DMSO_200M_050219_1,6999 HBL1_DMSO_200M_050219_1,6999,YQDTHPERL True True YQDTHPERL 36.778016 579.779711902142 14810179.25 6997.0 ENSG00000144591|ENST00000313597|GMPPA;;ENST00000481170.1_1_2:220370207-220370552:+|nuORF;;nc|ENSG00000144591|Q96IJ6-2|GMPPA 5.702335357666016 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7000 36.779 52.0 1677100.0 25 0 275300.0 + 45144 YQDTHPERL 9 88 386.8561067164149 1157.5464907494447 3 386.8559448122978 MULTI CID FTMS 0 0 0 6997 902639.3125 0.4165012934925776 -6 0.3334732055664062 3 Unmodified _YQDTHPERL_ ENSG00000144591|ENST00000313597|GMPPA;ENST00000481170.1_1_2:220370207-220370552:+|nuORF;nc|ENSG00000144591|Q96IJ6-2|GMPPA 21.59015148037692 0.2564810811560323 3 YQDTHPE[R{I|L}] 9 0 + 49.39 0.0 0.0 4.2668 4.2668 82.003 0.0 0.0 0.0 38.593210452788256 4.392200779062492 4.392200779062492 9.208187539523747 0 0.4247425010840047 0.0 0.0 0.5 + + YQDTHPE[R{I|L}];Y[AG]DTHPE[R{I|L}];YY[VP]KTD{[WS]|[C(Carbamidomethyl (C)){I|L}]} 4.2668;3.4713;1.021 +;-;- + 76 + 1 1.969 76463.1 1.0 1924 5074 6997 HBL1_DMSO_200M_050219_1,7000 HBL1_DMSO_200M_050219_1,7000,YQDTHPERL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7001 36.786 371.0 239200.0 25 0 13920.0 28243 PQQPVPTELS 10 133 365.86038380296407 1094.5593220090925 3 365.8608886599541 MULTI CID FTMS 0 0 0 6997 246113.6875 0.9649256203693448 -1 0.0067977905273437 4 Unmodified _PQQPVPTELS_ ENSG00000100083|ENST00000343632|GGA1;nc|ENSG00000100083|Q9UJY5-2|GGA1;nc|ENSG00000100083|Q9UJY5-3|GGA1;nc|ENSG00000100083|Q9UJY5-4|GGA1;nc|ENSG00000100083|Q9UJY5-6|GGA1 9.38312468134398 0.6832340498775793 3 [R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}K 4 10 29.693 0.0 0.0 2.7128 0.0 0.0 0.0 513.2315767877561 513.2315767877561 13.037275116073342 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}K 2.7128 - 149 + 1 1.969 76357.9 1.0 1925 5074 6997 HBL1_DMSO_200M_050219_1,7001 HBL1_DMSO_200M_050219_1,7001,PQQPVPTELS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7003 36.79 23.0 2291000.0 25 0 272830.0 + 29 AAAPPAKEI 9 65 434.25035221775966 866.4861515023193 2 434.2502929568291 MULTI CID FTMS 0 0 0 7002 2767771.0 0.1972655506651635 8 -0.1814689636230468 1 Unmodified _AAAPPAKEI_ ENSG00000166851|ENST00000300093|PLK1 29.081581746732265 0.1611639662936252 3 [PA]KEP 5 5 33.857 0.0 0.0 3.9073 0.0 0.0 0.0 341.1915097389006 341.1915097389006 3.1702408682765792 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.0 [PA]KEP 3.9073 - 116 1 1.976 46177.1 1.0 1926 5075 7002 HBL1_DMSO_200M_050219_1,7003 HBL1_DMSO_200M_050219_1,7003,AAAPPAKEI False True AAAPPAKEI 36.790459 434.250292956829 530397664.0 7002.0 ENSG00000166851|ENST00000300093|PLK1 5.133256753285726 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7004 36.792 41.0 1061800.0 25 0 185270.0 + 3796 DAIENKTTV 9 75 495.75891198640414 989.5032710396084 2 495.7588683962822 MULTI CID FTMS 0 0 0 7002 1365507.375 0.3480876472569446 3 -0.0472221374511718 2 Unmodified _DAIENKTTV_ ENSG00000130119|ENST00000360845|GNL3L 34.40172386719151 0.1061884637610825 3 {[DA]|[EG]}{I|L}HHV[W{I|L}] 8 6 + 37.681 0.0 0.0 3.8081 3.8081 78.406 0.0 0.0 0.0 6.989700043360188 2.659167939666318 2.659167939666318 6.989700043360188 0 0.5 2.0 0.3807196863200844 0.0 {[DA]|[EG]}{I|L}HHV[W{I|L}];{[QN]|[E{I|L}]|[KN]}GHHV[W{I|L}];{[QN]|[E{I|L}]|[KN]}{[ET]|[MV]}TV[W{I|L}];[{I|L}A]DHHV[W{I|L}];{[QN]|[E{I|L}]|[KN]}{[ET]|[MV]}{I|L}S[W{I|L}];[{I|L}T]EETV[W{I|L}];[{I|L}T]EE{I|L}S[W{I|L}];[QP]Q[YR][W{I|L}] 3.8081;3.1017;2.3193;1.9594;1.8082;1.0044;0.49341;0.23034 -;-;-;-;-;-;-;- 280 1 1.976 36930.3 1.0 1927 5075 7002 HBL1_DMSO_200M_050219_1,7004 HBL1_DMSO_200M_050219_1,7004,DAIENKTTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7005 36.793 59.0 887940.0 25 0 59270.0 + 28901 QAPPPPQQV 9 104 481.2587808144996 960.5030086957992 2 481.2588989138603 MULTI CID FTMS 0 0 0 7002 921970.0 0.0738809220350609 27 -1.1837310791015625 3 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 68.08070601005525 0.0218408846571049 3 [QA]PPPPG 7 3 46.24 0.0 0.0 4.8141 0.0 0.0 0.0 313.15367943238056 313.15367943238056 27.365713800054007 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.0 0.5796896906561032 [QA]PPPPG 4.8141 - 459 1 1.976 46164.0 1.0 1928 5075 7002 HBL1_DMSO_200M_050219_1,7005 HBL1_DMSO_200M_050219_1,7005,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7006 36.795 66.0 696150.0 25 0 44835.0 + 25062 MPVGPNAHKV 10 72 525.2816280204237 1048.5487031076473 2 525.2819702029228 MULTI CID FTMS 0 0 0 7002 707322.0 0.362480861671128 4 -0.0656852722167968 4 Unmodified _MPVGPNAHKV_ ENSG00000087365|ENST00000322535|SF3B2 36.12702656103203 0.1984647928738587 3 MPVG 4 6 56.714 0.0 0.0 5.4089 0.0 0.0 0.0 661.3425997369749 661.3425997369749 30.683728447993342 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.0 0.0 + MPVG 5.4089 + + 114 + 1 1.976 43278.9 1.0 1929 5075 7002 HBL1_DMSO_200M_050219_1,7006 HBL1_DMSO_200M_050219_1,7006,MPVGPNAHKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7008 36.799 38.0 1327900.0 25 0 160340.0 -1 IPAPTILPC 9 51 491.2772642218144 980.5399755104288 2 491.2767822146416 MULTI CID FTMS 0 0 0 7007 1343129.375 0.5553530379908824 4 -0.0773735046386718 1 Carbamidomethyl (C) _IPAPTILPC(Carbamidomethyl (C))_ ENSG00000135409|ENST00000257863|AMHR2;nc|ENSG00000135409|Q16671-3|AMHR2 21.74664581756881 0.2544899275067181 3 {I|L}PAPQ 5 -1 57.691 0.0 0.0 5.8836 0.0 0.0 0.0 471.2321566217407 471.2321566217407 53.0866814795592 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 {I|L}PAPQ 5.8836 - 75 + 1 1.976 48568.0 1.0 1930 5076 7007 HBL1_DMSO_200M_050219_1,7008 HBL1_DMSO_200M_050219_1,7008,IPAPTILPC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7009 36.801 52.0 1238100.0 25 0 125880.0 + 33245 SFPASSGVSH 10 78 488.2303025289275 974.446052124655 2 488.2306091189384 MULTI CID FTMS 0 0 0 7007 1043621.25 0.7202586832719859 -12 0.5789451599121094 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 56.17704186161178 0.0466144807663799 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH 10 0 + 87.23 0.0 0.0 8.9517 8.9517 98.011 0.0 0.0 0.0 52.61561899423568 16.53212513775344 16.53212513775344 31.026909627198407 0 0.3807196863200844 2.0 1.1307196863200843 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;[PA]S[SG]VSHAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[VG][WE][PG];{[QN]|[E{I|L}]|[KN]}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAY;[PA]S{[SA]|[TG]}[TA]HAY 8.9517;5.7677;5.2238;2.391;1.9937;1.3714;0.85691 +;-;-;-;-;-;- + 280 + 1 1.976 56267.9 1.0 1931 5076 7007 HBL1_DMSO_200M_050219_1,7009 HBL1_DMSO_200M_050219_1,7009,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7011 36.805 133.0 721050.0 25 0 101290.0 + 44861 YPPHVQKV 8 99 323.1837477176532 966.5294137531596 3 323.1833068728447 MULTI CID FTMS 0 0 0 7010 437760.53125 0.6128344697271955 38 -2.328330993652344 1 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 16.942295170755138 0.6606234159769251 3 YPPH{[QV]|[N{I|L}]|[RA]|[KV]}KV 8 0 + 42.361 0.0 0.0 4.3828 4.3828 85.926 0.0 0.0 0.0 31.10210997970381 0.5900883619464352 0.5900883619464352 30.96910013008056 0 0.0 1.2218487496163564 0.0 0.0 + + YPPH{[QV]|[N{I|L}]|[RA]|[KV]}KV;YV[MT]{[QV]|[N{I|L}]|[RA]|[KV]}KV 4.3828;1.1787 +;- + 104 + 1 1.976 80219.1 1.0 1932 5077 7010 HBL1_DMSO_200M_050219_1,7011 HBL1_DMSO_200M_050219_1,7011,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7012 36.819 800.0 149630.0 25 0 9922.8 + 26701 NYNYEQVNK 9 145 586.2726236919182 1170.5306944506362 2 586.2725707888603 MULTI CID FTMS 0 0 0 7010 116719.921875 0.6581574314390983 2 -0.0511016845703125 2 Unmodified _NYNYEQVNK_ ENSG00000168813|ENST00000355898|ZNF507;ENST00000586664.1_1_19:32873361-32873986:+|nuORF 75.76082778847304 0.0188720312721366 3 [YN]NYEQVNK 9 0 + 79.758 0.0 0.0 6.8138 6.8138 78.966 0.0 0.0 0.0 63.30449023251994 15.01734675796753 15.01734675796753 0.4575749056067479 0 1.0138793319624575 2.0 0.0 1.2786596949921218 + + [YN]NYEQVNK;[YN]NYEAGVNK;[YN]NYEQVGGK;[YN]GGYEQVNK;[YN]NYEAGVGGK;[YN]GGYEAGVNK;[YN]GGYEQVGGK;[YN]GGYEAGVGGK;[YN]NYEA[{I|L}V]W;[YN]N{[HG]|PP}[WR]QP 6.8138;6.7748;6.0272;6.0272;5.9918;5.9918;5.2442;5.212;3.9348;3.1024 +;-;-;-;-;-;-;-;-;- + 559 + 1 1.976 90108.7 0.7300000190734863 1933 5077 7010 HBL1_DMSO_200M_050219_1,7012 HBL1_DMSO_200M_050219_1,7012,NYNYEQVNK True True NYNYEQVNK 36.819318 586.27257078886 900257.3125 7010.0 ENSG00000168813|ENST00000355898|ZNF507;;ENST00000586664.1_1_19:32873361-32873986:+|nuORF 8.166098435719809 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7013 36.833 800.0 278760.0 25 0 16975.0 + 2473 AQYEDIAQK 9 190 533.2647122753077 1064.514871617415 2 533.2642700076103 MULTI CID FTMS 0 0 0 7010 185779.828125 0.2814816293124191 -4 0.0496978759765625 3 Unmodified _AQYEDIAQK_ ENSG00000167768|ENST00000252244|KRT1 96.36657018975838 0.0123932121270252 3 [QA]YED{I|L}AQK 9 0 [QA] + + 68.961 17.435 8.7571 6.4781 6.4781 60.544 0.0 0.0 0.0 0.0 37.111146605017225 0.0 0.0 0 1.5 0.0 0.4247425010840047 1.6560383909227112 + + [QA]YED{I|L}AQK 6.4781 + + 2541 + 1 1.976 170642.8 0.7699999809265137 1934 5077 7010 HBL1_DMSO_200M_050219_1,7013 HBL1_DMSO_200M_050219_1,7013,AQYEDIAQK True True AQYEDIAQK 36.833149 533.26427000761 3096792.75 7010.0 ENSG00000167768|ENST00000252244|KRT1 5.577932675679524 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7015 36.838 112.0 483070.0 25 0 55043.0 + -1 IVQADQKMK 9 79 538.7922436133879 1075.5699342935757 2 538.7922241091728 MULTI CID FTMS 0 0 0 7014 403550.90625 0.7970019054780674 4 -0.0871772766113281 1 Oxidation (M) _IVQADQKM(Oxidation (M))K_ REV__ENSG00000188158|ENST00000676302|NHS;REV__nc|ENSG00000188158|Q6T4R5-2|NHS;REV__nc|ENSG00000188158|Q6T4R5-3|NHS;REV__nc|ENSG00000188158|Q6T4R5-4|NHS 22.736283301280096 0.2418982879461534 3 T{M(Oxidation (M))|F}K 3 -1 43.5 0.0 0.0 4.0444 0.0 0.0 681.3810306219275 0.0 681.3810306219275 0.0 23.723637474483468 0.0 0.0 0 1.305462187404089 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 4.0444 - 198 1 1.976 49110.4 1.0 1935 5078 7014 HBL1_DMSO_200M_050219_1,7015 HBL1_DMSO_200M_050219_1,7015,IVQADQKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7016 36.852 800.0 44991.0 25 0 3871.6 -1 0 54 983.748628752162 2948.224056856686 3 984.4197265505792 MULTI CID FTMS 0 0 0 7014 97945.640625 0.5729503622915195 -6 0.1380767822265625 2 3 C(Carbamidomethyl (C)){M(Oxidation (M))|F} 2 -1 6.4537 0.0 0.0 0.2189 0.0 0.0 2038.862253733442 599.2589268947731 2638.121180628216 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){M(Oxidation (M))|F} 0.2189 - 29 + 1 1.976 35090.3 0.4399999976158142 1936 5078 7014 HBL1_DMSO_200M_050219_1,7016 HBL1_DMSO_200M_050219_1,7016, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7018 36.858 149.0 520880.0 25 0 57538.0 + 3854 DAKLDKSQI 9 93 509.2821408722221 1016.5497288112442 2 509.2813598513603 MULTI CID FTMS 0 0 0 7017 422503.0 0.0981430536930446 -5 0.0940017700195312 1 Unmodified _DAKLDKSQI_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000425843.1_1_X:120337800-120338163:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 64.9267550582149 0.0233543250187123 3 DAK{I|L}DK{[QS]|[NT]}{I|L} 9 0 + 84.861 0.0 0.0 8.3479 8.3479 97.564 0.0 0.0 0.0 72.09650770552034 3.511744483784085 3.511744483784085 39.54750954047803 0 1.9361818737241727 1.6989700043360187 0.3807196863200844 0.6989700043360187 + + DAK{I|L}DK{[QS]|[NT]}{I|L};{I|L}[NS]{I|L}DK{[QS]|[NT]}{I|L} 8.3479;4.4575 +;- + 295 + 1 1.985 64168.7 1.0 1937 5079 7017 HBL1_DMSO_200M_050219_1,7018 HBL1_DMSO_200M_050219_1,7018,DAKLDKSQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7019 36.872 800.0 134160.0 25 0 9430.4 + 8888 FAENNITQSK 10 115 576.2875097682262 1150.5604666032525 2 576.2869140505791 MULTI CID FTMS 0 0 0 7017 90738.859375 0.8600831471355959 1 -0.0204200744628906 2 Unmodified _FAENNITQSK_ REV__ENSG00000083544|ENST00000377881|TDRD3;REV__nc|ENSG00000083544|Q9H7E2-2|TDRD3;REV__nc|ENSG00000083544|Q9H7E2|TDRD3 21.53697664764585 0.484802182336468 3 HPM[WR]SK 7 -1 38.998 0.0 0.0 3.3894 0.0 0.0 210.097082640908 0.0 210.097082640908 0.0 28.81649648552772 0.0 0.0 0 0.6923877696554315 0.0 0.7600012904178959 0.6549471895720985 HPM[WR]SK 3.3894 - 356 + 1 1.985 83693.1 0.6200000047683716 1938 5079 7017 HBL1_DMSO_200M_050219_1,7019 HBL1_DMSO_200M_050219_1,7019,FAENNITQSK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7021 36.877 158.0 492100.0 25 0 56519.0 + 22193 LPQEQKAKI 9 111 352.2135087901646 1053.618696970694 3 352.2133056521416 MULTI CID FTMS 0 0 0 7020 310096.65625 0.3698606052686173 6 -0.3042488098144531 1 Unmodified _LPQEQKAKI_ ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1 16.149105407346934 0.3995459350917656 3 {I|L}PQ 3 6 21.427 0.0 0.0 2.0336 0.0 0.0 0.0 712.4009715451497 712.4009715451497 7.2261176578251 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}PQ 2.0336 + + 77 + 1 1.985 69660.5 1.0 1939 5080 7020 HBL1_DMSO_200M_050219_1,7021 HBL1_DMSO_200M_050219_1,7021,LPQEQKAKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7022 36.891 800.0 176290.0 25 0 10962.0 + 41374 VPKSAVQQV 9 175 478.2827322645072 954.5509115958145 2 478.2834960818291 MULTI CID FTMS 0 0 0 7020 70923.4921875 0.6827231806383579 1 -0.0232696533203125 2 Unmodified _VPKSAVQQV_ ENSG00000066422|ENST00000312938|ZBTB11 24.020572477871973 0.2255576514309169 3 {[VA]|[{I|L}G]}GAA{I|L}VQQV 10 4 + 32.211 0.0 0.0 3.3745 3.3745 68.558 0.0 0.0 0.0 9.000109629655135 1.7467245183347089 1.7467245183347089 0.5237875363565792 0 0.4218851356388092 1.5228787452803376 0.0 0.0 {[VA]|[{I|L}G]}GAA{I|L}VQQV;{[VA]|[{I|L}G]}GAA{I|L}QVQV;{[VA]|[{I|L}G]}GQ{I|L}{I|L}QQV;{[VA]|[{I|L}G]}GQ[RV]VQV;{[VA]|[{I|L}G]}GAA{I|L}QQVV;{[VA]|[{I|L}G]}[QA]{I|L}VQQV;{[VA]|[{I|L}G]}[QA]{I|L}QVQV;{[VA]|[{I|L}G]}GQ[RV]QVV;{[VA]|[{I|L}G]}GAA{I|L}V[AG]QV;{[QV]|[N{I|L}]|[RA]|[KV]}AA{I|L}VQQV 3.3745;3.3196;3.0757;3.0208;2.8373;2.6902;2.6353;2.5385;2.4144;2.4117 -;-;-;-;-;-;-;-;-;- 982 1 1.985 108134.5 0.5699999928474426 1940 5080 7020 HBL1_DMSO_200M_050219_1,7022 HBL1_DMSO_200M_050219_1,7022,VPKSAVQQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7023 36.895 214.0 315090.0 25 0 44856.0 + 41703 VPSGAATTV 9 103 401.718690058923 0 401.7187072634697 PEAK CID FTMS 0 0 0 7020 206107.171875 0.7111271920456411 -4 0.0773735046386718 3 Unmodified _VPSGAATTV_ ENSG00000089486|ENST00000567695|CDIP1 28.486842064014134 0.1241350795510704 3 TVT{M(Oxidation (M))|F}T 5 8 18.047 0.0 0.0 2.2519 0.0 0.0 135.08856525038703 114.05645166568593 249.14501691607296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 TVT{M(Oxidation (M))|F}T 2.2519 - 145 + 1 1.985 55874.2 1.0 1941 5080 7020 HBL1_DMSO_200M_050219_1,7023 HBL1_DMSO_200M_050219_1,7023,VPSGAATTV True True VPSGAATTV 36.895305 401.71870726347 3263584.75 7020.0 ENSG00000089486|ENST00000567695|CDIP1 2.071254650751749 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7025 36.911 800.0 99290.0 25 0 11715.0 -1 0 60 874.8432099179529 0 874.8439208865166 PEAK CID FTMS 0 0 0 -1 0 1 3 PGQ 3 -1 16.198 0.0 0.0 0.92683 0.0 0.0 140.8948627677119 1321.6219986445249 1462.5168614122367 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PGQ 0.92683 - 35 + 1 1.985 67017.9 0.4900000095367431 1942 5081 7024 HBL1_DMSO_200M_050219_1,7025 HBL1_DMSO_200M_050219_1,7025, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7026 36.914 109.0 619390.0 25 0 55693.0 7974 ELVMQVQV 8 105 473.2589306064832 0 473.2590209841728 PEAK CID FTMS 0 0 0 7024 480976.53125 0.7250716886486731 -15 0.5449295043945312 2 Unmodified _ELVMQVQV_ ENST00000490442.5_1_10:70098974-70099271:+|nuORF 8.593279151180031 0.5573742999696857 3 D 1 8 1.2591 0.0 0.0 0.1333 0.0 0.0 602.3491772756632 224.1042879693969 826.4534652450601 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.1333 - 1 + 1 1.985 57373.9 1.0 1943 5081 7024 HBL1_DMSO_200M_050219_1,7026 HBL1_DMSO_200M_050219_1,7026,ELVMQVQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7027 36.916 117.0 603990.0 25 0 48800.0 -1 AYMPPTSEA 9 97 491.7128300158537 981.4111070985074 2 491.7130004763603 MULTI CID FTMS 0 0 0 7024 332955.90625 0.3317126265934884 -3 0.0621528625488281 3 Oxidation (M) _AYM(Oxidation (M))PPTSEA_ ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP 24.67388899826682 0.2172451872415813 3 [PA]VD{[MS]|[{M(Oxidation (M))|F}A]}YEA 9 -1 + 31.779 0.0 0.0 3.2381 3.2381 77.92 0.0 0.0 0.0 8.29303772831025 8.384767769392745 8.29303772831025 8.29303772831025 0 0.6989700043360187 1.3979400086720375 0.5 0.0 [PA]VD{[MS]|[{M(Oxidation (M))|F}A]}YEA;[{I|L}P]GD{[MS]|[{M(Oxidation (M))|F}A]}YEA;{[HG]|PP}TS{[MS]|[{M(Oxidation (M))|F}A]}YEA;[TP]PS{[MS]|[{M(Oxidation (M))|F}A]}YEA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}P{[RE]|[WV]}EA;[PA]VDE[HD]EA;[{I|L}P]GDE[HD]EA;{[MS]|[{M(Oxidation (M))|F}A]}Y[WH]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[PA]{I|L}DD[HD]EA;[PG]{I|L}D{[MS]|[{M(Oxidation (M))|F}A]}YEA 3.2381;2.3931;2.1951;2.1458;2.0702;1.7442;0.89916;0.8633;0.78259;0.73287 -;-;-;-;-;-;-;-;-;- 308 1 1.985 60896.0 1.0 1944 5081 7024 HBL1_DMSO_200M_050219_1,7027 HBL1_DMSO_200M_050219_1,7027,AYMPPTSEA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7028 36.92 225.0 525590.0 25 0 42808.0 20994 LNREGPKAL 9 159 333.1981946062847 996.572754419054 3 333.1993286013603 MULTI CID FTMS 0 0 0 7024 155444.953125 0.1129938644592955 11 -0.4888648986816406 4 Unmodified _LNREGPKAL_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 21.53697664764585 0.2571576504437394 3 QTPR{I|L} 5 7 34.609 0.0 0.0 3.4728 0.0 0.0 383.22154433418126 0.0 383.22154433418126 0.0 9.696056292111235 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 QTPR{I|L} 3.4728 - 724 1 1.985 99716.8 1.0 1945 5081 7024 HBL1_DMSO_200M_050219_1,7028 HBL1_DMSO_200M_050219_1,7028,LNREGPKAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7030 36.936 800.0 206440.0 25 0 22728.0 + 29354 QKDDILNQAY 10 173 604.3024557958225 1206.590358658445 2 604.3031494021416 MULTI CID FTMS 0 0 0 7029 151284.90625 0.5286146579631346 -2 0.0482940673828125 1 Unmodified _QKDDILNQAY_ REV__ENST00000414786.6_1_22:51113069-51169737:+|nuORF;REV__nc|ENSG00000251322|Q9BYB0|SHANK3 28.49450938151212 0.328477364964909 3 [AG]KVED{I|L}NVSK 11 -1 80.401 0.0 0.0 6.6635 0.0 0.0 0.0 62.9518546589126 62.9518546589126 58.90508495853072 0.0 0.0 0.0 0 2.020021379835142 1.0969100130080565 0.7302046884880937 1.5669015600442575 [AG]KVED{I|L}NVSK 6.6635 - 16808 1 1.985 120344.6 0.6899999976158142 1946 5082 7029 HBL1_DMSO_200M_050219_1,7030 HBL1_DMSO_200M_050219_1,7030,QKDDILNQAY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7031 36.938 46.0 1507400.0 25 0 347590.0 + 3857 DAKLDKSQI 9 79 339.8574164121279 1016.5504198365838 3 339.8570739626884 MULTI CID FTMS 0 0 0 7029 740893.25 0.3337043194699597 -2 0.0482940673828125 2 Unmodified _DAKLDKSQI_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000425843.1_1_X:120337800-120338163:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 10.073929032068715 0.563993802247229 3 {I|L} 1 8 13.099 0.0 0.0 1.2886 0.0 0.0 885.4555997455666 0.0 885.4555997455666 0.0 2.2969624387961574 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2886 + + 171 + 1 1.985 63040.5 1.0 1947 5082 7029 HBL1_DMSO_200M_050219_1,7031 HBL1_DMSO_200M_050219_1,7031,DAKLDKSQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7032 36.941 169.0 669540.0 25 0 54124.0 + + 38245 TPVPARLR 8 113 303.85888620578703 0 303.8588134646416 PEAK CID FTMS 0 0 0 7029 266198.8125 1.0 0 0.0 3 Unmodified _TPVLRRAP_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 18.13498045792455 0.4501116112875982 3 T 1 -1 5.5751 0.0 0.0 0.92043 0.0 0.0 435.5975198707553 66.03565393619374 501.63317380694906 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1595680409956017 0.0 T 0.92043 + + 11 + 1 1.985 95584.7 1.0 1948 5082 7029 HBL1_DMSO_200M_050219_1,7032 HBL1_DMSO_200M_050219_1,7032,TPVLRRAP False False TPVPARLR 36.940979 303.858813464642 59108284.0 7029.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 2.2379015951106944 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7033 36.947 323.0 324220.0 25 0 40473.0 + 2923 AVGPVHNSV 9 120 440.2381788451035 878.461804757007 2 440.2368957400322 MULTI CID FTMS 0 0 0 7029 148446.40625 0.8906739841300794 -2 0.0482940673828125 4 Unmodified _AVGPVHNSV_ ENSG00000115760|ENST00000421745|BIRC6 20.453626601364224 0.2830276176381075 3 {[VA]|[{I|L}G]}G[YN]S[R{I|L}] 8 5 + 28.35 0.0 0.0 3.2273 3.2273 80.288 0.0 0.0 0.0 7.140012553530973 16.277107115441883 7.140012553530973 9.950302811041135 0 0.4247425010840047 2.0 0.0 0.0 {[VA]|[{I|L}G]}G[YN]S[R{I|L}];{[VA]|[{I|L}G]}[RP]{[QD]|[EN]|[WG]|[KD]|[RS]}PP;{[VA]|[{I|L}G]}[RP][HN]SV;{[VA]|[{I|L}G]}[VS][Y{M(Oxidation (M))|F}]PP;[YQ]{[NV]|[RG]}S[R{I|L}];[PG][HV]NS[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}[YN]S[R{I|L}] 3.2273;2.0946;1.9905;1.7601;0.95186;0.93255;0.080055 -;-;-;-;-;-;- 216 1 1.985 85513.3 1.0 1949 5082 7029 HBL1_DMSO_200M_050219_1,7033 HBL1_DMSO_200M_050219_1,7033,AVGPVHNSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7034 36.954 378.0 235550.0 25 0 29898.0 + 44867 YPPHVQKV 8 128 484.2717553203813 966.5289577075628 2 484.2708923220634 MULTI CID FTMS 0 0 0 7029 124810.421875 0.7317686220488635 14 -0.6332778930664062 5 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 28.486842064014134 0.4448922141344407 3 YPPHVQKV 8 0 + 48.051 0.0 0.0 4.9715 4.9715 84.751 0.0 0.0 0.0 21.139690430616447 0.4314373588575719 0.4314373588575719 9.262137858390808 0 0.3807196863200844 2.0 0.0 0.1861818737241735 + + YPPHVQKV;YPPHV[AG]KV 4.9715;4.0132 +;- + 137 + 1 1.985 72228.0 1.0 1950 5082 7029 HBL1_DMSO_200M_050219_1,7034 HBL1_DMSO_200M_050219_1,7034,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7035 36.967 800.0 218290.0 25 0 32043.0 + -1 LSLECCLSSQ 10 143 570.2579164514227 0 570.2587768435478 PEAK CID FTMS 0 0 0 7029 126366.9140625 0.5090341723640328 -2 0.0482940673828125 6 Carbamidomethyl (C) _LSLEC(Carbamidomethyl (C))CLSSQ_ REV__ENST00000528434.5_3_11:47521110-47545183:-|nuORF 39.94969957227396 0.1110137703778733 3 {I|L}E[MT]K 5 -1 35.075 0.0 0.0 3.0808 0.0 0.0 200.11819952472223 333.0333651178344 533.1515646425567 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.3494850021680094 1.5114393726401687 {I|L}E[MT]K 3.0808 - 207 + 1 1.985 134664.4 0.6600000262260437 1951 5082 7029 HBL1_DMSO_200M_050219_1,7035 HBL1_DMSO_200M_050219_1,7035,LSLECCLSSQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7037 36.972 34.0 1145300.0 25 0 92520.0 + 34801 SQEGRPVQV 9 77 500.2644937104114 998.5144344876228 2 500.2646667361259 MULTI CID FTMS 0 0 0 7036 1521091.625 0.0803225521896161 13 -0.5862083435058594 1 Unmodified _SQEGRPVQV_ ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 49.55428908609986 0.0413471690215031 3 {[QS]|[NT]}E{[NV]|[RG]}[VP]QV 9 0 + 30.904 0.0 0.0 3.095 3.095 79.954 0.0 0.0 0.0 3.3635935482518 3.3635935482518 3.3635935482518 9.676426261994845 0 1.7568721510623968 0.0 0.2887254899964357 0.3054621874040891 + + {[QS]|[NT]}E{[NV]|[RG]}[VP]QV;{[QS]|[NT]}{I|L}{I|L}{[NV]|[RG]}YY;{[QS]|[NT]}G{[RE]|[WV]}[VP]QV;{[QV]|[N{I|L}]|[RA]|[KV]}P{[NV]|[RG]}ESQV;[VP]Q{[NV]|[RG]}ESQV;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]{[NV]|[RG]}YY 3.095;2.1259;1.7796;0.5174;0.21592;0.18871 +;-;-;-;-;- + 180 1 1.99 34861.5 1.0 1952 5083 7036 HBL1_DMSO_200M_050219_1,7037 HBL1_DMSO_200M_050219_1,7037,SQEGRPVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7038 36.974 109.0 545620.0 25 0 25933.0 5095 DHNDGLGNAF 10 89 530.2280718387927 1058.4415907443854 2 530.2281371951103 MULTI CID FTMS 0 0 0 7036 634173.375 0.3587414587084228 6 -0.3453140258789062 2 Unmodified _DHNDGLGNAF_ ENSG00000271447|ENST00000605424|MMP28 16.149105407346934 0.5765757077271437 3 [HD]EAQQNA{M(Oxidation (M))|F} 9 5 + 70.226 0.0 0.0 6.6349 6.6349 90.207 0.0 0.0 0.0 16.733715863610257 46.2537979487912 16.733715863610257 9.208187539523756 0 0.7302046884880937 0.958607314841775 0.3494850021680094 0.0 [HD]EAQQNA{M(Oxidation (M))|F};[HD]EA[AG]QNA{M(Oxidation (M))|F};[HD]EAQ[AG]NA{M(Oxidation (M))|F};[HD]EAQQGGA{M(Oxidation (M))|F};[HD]EA[AG][AG]NA{M(Oxidation (M))|F};[HD]EA[AG]QGGA{M(Oxidation (M))|F};[HD]EAQ[AG]GGA{M(Oxidation (M))|F};{[WT]|[RM]}{M(Oxidation (M))|F}HHNA{M(Oxidation (M))|F};[HV]NQQA[{M(Oxidation (M))|F}E]S;{[WT]|[RM]}{M(Oxidation (M))|F}HHGGA{M(Oxidation (M))|F} 6.6349;5.7649;5.7649;5.7649;4.899;4.899;4.899;2.613;2.412;1.7379 -;-;-;-;-;-;-;-;-;- 177 1 1.99 49493.9 1.0 1953 5083 7036 HBL1_DMSO_200M_050219_1,7038 HBL1_DMSO_200M_050219_1,7038,DHNDGLGNAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7039 36.977 128.0 378170.0 25 0 37630.0 + 1025 AGDLEEKH 8 92 449.71701227957 897.41947162594 2 449.7169982790947 MULTI CID FTMS 0 0 0 7036 354482.5 0.4702226272482593 -5 0.134246826171875 3 Unmodified _AGDLEEKH_ REV__ENSG00000163444|ENST00000367242|TMEM183A;REV__ENST00000463015.1_1_1:202977868-202984294:+|nuORF;REV__nc|ENSG00000163444|Q8IXX5-2|TMEM183A;REV__nc|ENSG00000224831|Q1AE95|TMEM183BP 26.88365393820708 0.4786498634179528 3 [DG]AP 4 -1 38.474 0.0 0.0 4.2872 0.0 0.0 0.0 554.2588630656462 554.2588630656462 23.870090806403468 0.0 0.0 0.0 0 0.8807196863200843 1.3979400086720375 0.25 0.0 [DG]AP 4.2872 - 89 1 1.99 42484.2 1.0 1954 5083 7036 HBL1_DMSO_200M_050219_1,7039 HBL1_DMSO_200M_050219_1,7039,AGDLEEKH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7040 36.981 209.0 338450.0 25 0 50041.0 -1 0 54 952.9516489946288 1903.8887450560576 2 953.4543945193292 MULTI CID FTMS 0 0 0 7036 332890.875 0.0946943941956349 -3 0.0953636169433593 4 3 {M(Oxidation (M))|F} 1 -1 10.089 0.0 0.0 0.5299 0.0 0.0 1738.8452707902356 0.0 1738.8452707902356 0.0 3.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.5299 - 8 + 1 1.99 55897.9 1.0 1955 5083 7036 HBL1_DMSO_200M_050219_1,7040 HBL1_DMSO_200M_050219_1,7040, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7041 36.995 800.0 108710.0 25 0 8149.5 -1 HYQYFCPL 8 127 564.2504781935261 1126.486403453852 2 564.2509033083916 MULTI CID FTMS 0 0 0 7036 123451.0546875 0.2943879095417711 8 -0.4069633483886719 5 Carbamidomethyl (C) _HYQYFC(Carbamidomethyl (C))PL_ ENSG00000171877|ENST00000417257|FRMD5;nc|ENSG00000171877|Q7Z6J6-2|FRMD5 20.871210003555333 0.6025813472596342 3 HYQ 3 -1 55.392 0.0 0.0 4.9173 0.0 0.0 0.0 695.2840059869749 695.2840059869749 36.785349579737016 0.0 0.0 0.0 0 0.6307196863200843 2.0 0.0 0.2887254899964357 HYQ 4.9173 + + 285 + 1 1.99 74274.3 0.6700000166893005 1956 5083 7036 HBL1_DMSO_200M_050219_1,7041 HBL1_DMSO_200M_050219_1,7041,HYQYFCPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7042 37.0 293.0 245030.0 25 0 21259.0 + 43157 VYQNHVQHL 9 109 379.86477254758734 1136.572488242962 3 379.8639099001884 MULTI CID FTMS 0 0 0 7036 127498.796875 0.810151110493343 -1 0.0470695495605468 6 Unmodified _VYQNHVQHL_ ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5 15.847184025352805 0.4077185912009129 3 NHQV{I|L}H 6 6 13.593 0.0 0.0 1.196 0.0 0.0 390.1943276978432 0.0 390.1943276978432 0.0 2.0419999879131474 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.0 NHQV{I|L}H 1.196 - 174 + 1 1.99 64849.8 1.0 1957 5083 7036 HBL1_DMSO_200M_050219_1,7042 HBL1_DMSO_200M_050219_1,7042,VYQNHVQHL False True VYQNHVQHL 37.000179 379.863909900188 696977.9375 7036.0 ENSG00000100852|ENST00000345122|ARHGAP5;;nc|ENSG00000100852|Q13017-2|ARHGAP5 6.897475878397624 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7043 37.014 800.0 181920.0 25 0 7531.6 5922 DPYVLSPEDD 10 162 575.2532428519062 1148.4919327706125 2 575.2534667849541 MULTI CID FTMS 0 0 0 7036 112574.984375 0.4217579925515636 -1 0.0470695495605468 7 Unmodified _DPYVLSPEDD_ ENSG00000126746|ENST00000683879|ZNF384;ENST00000542519.1_1_12:6782380-6787618:-|nuORF;nc|ENSG00000126746|Q8TF68-2|ZNF384;nc|ENSG00000126746|Q8TF68-3|ZNF384;nc|ENSG00000126746|Q8TF68|ZNF384 18.1463463914782 0.5430639438673815 3 PYDKNHQ{I|L} 8 8 43.907 0.0 0.0 3.823 0.0 0.0 134.99839565960662 0.0 134.99839565960662 0.0 12.704869456122893 0.0 0.0 0 0.0 0.0 0.0 1.4802046884880935 PYDKNHQ{I|L} 3.823 - 6539 + 1 1.99 113601.4 0.6499999761581421 1958 5083 7036 HBL1_DMSO_200M_050219_1,7043 HBL1_DMSO_200M_050219_1,7043,DPYVLSPEDD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7044 37.028 800.0 204910.0 25 0 16064.0 + 26297 NQVRNKGTW 9 177 551.7906308325844 1101.566708731969 2 551.7924682497978 MULTI CID FTMS 0 0 0 7036 95141.28125 1.0 0 0.0 8 Unmodified _NQVRNKGTW_ REV__ENSG00000188706|ENST00000357166|ZDHHC9 11.640296217721598 0.521594087909532 3 [Q{I|L}]VE{I|L}K{[MG]|[TS]}D 9 -1 20.881 0.0 0.0 1.8956 0.0 0.0 0.0 85.03013788394765 85.03013788394765 8.23953970530674 0.0 0.0 0.0 0 0.5 0.0 0.805462187404089 0.0 [Q{I|L}]VE{I|L}K{[MG]|[TS]}D 1.8956 - 874 + 1 1.99 126693.2 0.6100000143051147 1959 5083 7036 HBL1_DMSO_200M_050219_1,7044 HBL1_DMSO_200M_050219_1,7044,NQVRNKGTW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7046 37.032 49.0 1041300.0 25 0 96741.0 + 6428 EAASLAWLA 9 91 466.2462268697885 930.4779008063772 2 466.7485839724541 MULTI CID FTMS 0 0 0 7045 919812.375 0.21380859390663 13 -0.5800056457519531 1 Unmodified _EAASLAWLA_ REV__ENST00000609118.1_1_1:111505930-111506428:+|nuORF 19.438996006549623 0.310492472477042 3 PPPA{M(Oxidation (M))|F} 5 -1 25.918 0.0 0.0 2.7854 0.0 0.0 403.2359707300083 0.0 403.2359707300083 0.0 -4.434524456659123 -4.434524456659123 0.0 0 0.0 0.0 0.0 0.0 PPPA{M(Oxidation (M))|F} 2.7854 - 215 + 1 1.99 45943.6 1.0 1960 5084 7045 HBL1_DMSO_200M_050219_1,7046 HBL1_DMSO_200M_050219_1,7046,EAASLAWLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7047 37.034 100.0 514380.0 25 0 75367.0 + 35078 SQVEGEHQL 9 76 513.7460685831627 1025.4775842331253 2 513.7462036013603 MULTI CID FTMS 0 0 0 7045 528460.0 0.0399410535773643 15 -0.7038612365722656 2 Unmodified _SQVEGEHQL_ ENSG00000117724|ENST00000366955|CENPF 51.629811660486645 0.0367964933207742 3 {[QS]|[NT]}VE{[DA]|[EG]}H[Q{I|L}] 9 0 + 48.238 0.0 0.0 4.704 4.704 87.004 0.0 0.0 0.0 22.48081567653314 6.9967179073564125 6.9967179073564125 31.805686803821445 0 0.9247425010840048 1.154901959985743 0.4247425010840047 0.5501648626366046 + + {[QS]|[NT]}VE{[DA]|[EG]}H[Q{I|L}];{[QS]|[NT]}{[QN]|[E{I|L}]|[KN]}[DG]H[Q{I|L}];[HQ]{[WN]|[YH]}Q[WK] 4.704;1.6025;0.068578 +;-;- + 164 + 1 1.99 45458.4 1.0 1961 5084 7045 HBL1_DMSO_200M_050219_1,7047 HBL1_DMSO_200M_050219_1,7047,SQVEGEHQL True True SQVEGEHQL 37.034452 513.74620360136 198333084.0 7045.0 ENSG00000117724|ENST00000366955|CENPF 7.585431575775146 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7048 37.036 47.0 1051600.0 25 0 82498.0 6359 DVRQTPQV 8 87 471.7536258574754 941.492698781751 2 471.7537719607353 MULTI CID FTMS 0 0 0 7045 852887.3125 0.9888325705123602 -1 0.0603561401367187 3 Unmodified _DVRQTPQV_ ENSG00000166483|ENST00000450114|WEE1;ENST00000524549.1_1_11:9597437-9598815:+|nuORF;nc|ENSG00000166483|P30291-2|WEE1 41.8396318013385 0.2035142800366642 3 [DV]RTQPQV 8 2 + 46.843 0.0 0.0 4.9754 4.9754 75.772 0.0 0.0 0.0 15.689016993299898 15.689016993299898 15.689016993299898 2.09544243948811 0 1.5545970543767125 1.5228787452803376 0.3494850021680094 0.0 [DV]RTQPQV;[DV]RQTPQV;[DV]RT[AG]PQV;[DV]R[AG]TPQV;{[QS]|[NT]}A[KG]QPQV;{[ES]|[DT]|[{I|L}C]}[RV]QPQV;{[QS]|[NT]}[RV]EPQV;{[QS]|[NT]}[KQ]QPQV;[VS]{[RE]|[WV]}QPQV;[DV]RNP{[QD]|[EN]|[WG]|[KD]|[RS]}V 4.9754;4.7528;3.9916;3.769;3.309;2.8803;2.6742;2.6209;2.5779;2.535 -;+;-;-;-;-;-;-;-;- + 597 1 1.99 44872.3 1.0 1962 5084 7045 HBL1_DMSO_200M_050219_1,7048 HBL1_DMSO_200M_050219_1,7048,DVRQTPQV False True TDAPTSPRV 37.035712 471.753771960735 5410578.0 7045.0 ENSG00000105063|ENST00000412770|PPP6R1 3.392586429913839 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7049 37.041 271.0 326600.0 25 0 50031.0 + 36623 TARPQAPATV 10 119 506.2810857283269 1010.5476185234536 2 506.2818176150322 MULTI CID FTMS 0 0 0 7045 258878.78125 0.8177685156612624 -1 0.0603561401367187 4 Unmodified _TARPQAPATV_ ENSG00000103363|ENST00000409906|ELOB;nc|ENSG00000103363|Q15370-2|ELOB 42.312485326615175 0.1331477410672653 3 [PA]TVQQPATV 10 4 + 69.715 0.0 0.0 6.8988 6.8988 80.462 0.0 0.0 0.0 10.413926851582254 16.53212513775344 10.413926851582254 1.2057393120584976 0 0.9247425010840048 1.0457574905606752 0.3807196863200844 0.3807196863200844 [PA]TVQQPATV;[PA]TV{[QG]|[NA]}APATV;[TA]PVQQPATV;[PA]T{I|L}{[QN]|[E{I|L}]|[KN]}PATV;[TA]PV{[QG]|[NA]}APATV;[TA]P{I|L}{[QN]|[E{I|L}]|[KN]}PATV;{[TV]|[{I|L}S]}[PA]QQPATV;{[TV]|[{I|L}S]}[PA]{[QG]|[NA]}APATV;[TA]R[QP]APATV;{[TV]|[{I|L}S]}{[QG]|[NA]}[PA]APATV 6.8988;6.7794;5.8682;5.8682;5.7489;4.8377;4.6665;4.5472;4.4236;3.7109 -;-;-;-;-;-;-;-;+;- + 489 1 1.99 73864.8 1.0 1963 5084 7045 HBL1_DMSO_200M_050219_1,7049 HBL1_DMSO_200M_050219_1,7049,TARPQAPATV False True TARPQAPATV 37.040704 506.281817615032 2854543.5 7045.0 nc|ENSG00000103363|Q15370-2|ELOB;;ENSG00000103363|ENST00000409906|ELOB 6.8790351549784345 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7050 37.044 168.0 356850.0 25 0 25601.0 + 25060 MPVGPNAHKV 10 97 350.5235363385141 1048.5487796157422 3 350.5232726931572 MULTI CID FTMS 0 0 0 7045 228384.921875 0.0670828255527245 12 -0.5258522033691406 5 Unmodified _MPVGPNAHKV_ ENSG00000087365|ENST00000322535|SF3B2 13.042465956692816 0.6287021003332052 3 [VP]G 3 7 22.676 0.0 0.0 2.1626 0.0 0.0 0.0 792.3832119490031 792.3832119490031 10.20181229336984 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [VP]G 2.1626 + + 50 1 1.99 57615.5 1.0 1964 5084 7045 HBL1_DMSO_200M_050219_1,7050 HBL1_DMSO_200M_050219_1,7050,MPVGPNAHKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7051 37.05 307.0 261700.0 25 0 42083.0 + 3778 DAHLGSSSV 9 105 436.7090904285124 871.4036279238247 2 436.7091857790947 MULTI CID FTMS 0 0 0 7045 180723.03125 0.2406527773535579 -2 0.1074256896972656 6 Unmodified _DAHLGSSSV_ ENSG00000169905|ENST00000609928|TOR1AIP2 48.345845343767074 0.0439967357579942 3 {[DA]|[EG]}H{I|L}GS 6 3 34.046 0.0 0.0 3.907 0.0 0.0 0.0 288.121681472906 288.121681472906 13.01090713367989 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.8807196863200843 0.0 + {[DA]|[EG]}H{I|L}GS 3.907 + + 215 1 1.99 66972.2 1.0 1965 5084 7045 HBL1_DMSO_200M_050219_1,7051 HBL1_DMSO_200M_050219_1,7051,DAHLGSSSV True True DAHLGSSSV 37.049573 436.709185779095 4193727.25 7045.0 ENSG00000169905|ENST00000609928|TOR1AIP2 6.982316970825195 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7052 37.059 544.0 290090.0 25 0 19350.0 + 25657 NFYDKKTAIH 10 155 412.8836710393367 1235.62918371821 3 412.8835632205009 MULTI CID FTMS 0 0 0 7045 160083.703125 0.6664086767354073 -1 0.0603561401367187 7 Unmodified _NFYDKKTAIH_ ENSG00000110619|ENST00000380525|CARS1;ENST00000531387.5_1_11:3022346-3069017:-|nuORF;nc|ENSG00000110619|P49589-2|CARS1;nc|ENSG00000110619|P49589|CARS1 35.079672537005266 0.2095246155385646 3 GG{M(Oxidation (M))|F}YDKK[TA]{I|L}H 11 2 + 54.268 0.0 0.0 4.3919 4.3919 83.215 0.0 0.0 0.0 24.693055059165804 12.38538470608529 12.38538470608529 9.542425094393252 0 0.2396518287104437 1.0457574905606752 0.6421590589602533 0.0 GG{M(Oxidation (M))|F}YDKK[TA]{I|L}H;GG{M(Oxidation (M))|F}YDK[{I|L}T][KA]H;GG{M(Oxidation (M))|F}Y[VG]SK[TA]{I|L}H;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[HV]SQ[SG]{I|L}H;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[HV]S[HA]A{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[TA]{M(Oxidation (M))|F}[Y{I|L}]{I|L}H;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}RV[{M(Oxidation (M))|F}E]A{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}RV[{M(Oxidation (M))|F}E][WQ];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[RE]|[WV]}{M(Oxidation (M))|F}[Y{I|L}]{I|L}H;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[HV]S[HA][WQ] 4.3919;3.6196;2.9543;1.6148;0.32594;0.295;0.28002;0.18952;0.0099817;0.0099817 -;-;-;-;-;-;-;-;-;- 462 + 1 1.99 127143.2 1.0 1966 5084 7045 HBL1_DMSO_200M_050219_1,7052 HBL1_DMSO_200M_050219_1,7052,NFYDKKTAIH False True NFYDKKTAIH 37.059129 412.883563220501 1385297.25 7045.0 nc|ENSG00000110619|P49589-2|CARS1;;ENSG00000110619|ENST00000380525|CARS1;;nc|ENSG00000110619|P49589|CARS1;;ENST00000531387.5_1_11:3022346-3069017:-|nuORF 5.95748249689738 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7053 37.073 800.0 259420.0 25 0 53220.0 + 13576 HPLEDRNTI 9 136 547.7835114581994 1093.5524699831988 2 547.7838622927666 MULTI CID FTMS 0 0 0 7045 114478.4921875 0.149045678226251 -4 0.1557197570800781 8 Unmodified _HPLEDRNTI_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 41.95555342248728 0.0647214845423414 3 [{I|L}P]E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}{I|L}C{I|L} 9 6 + 62.287 0.0 0.0 5.6958 5.6958 76.337 0.0 0.0 0.0 1.2942225848042028 45.69318537364903 1.2942225848042028 0.9691001300805624 0 0.9957416651753048 2.0 0.4247425010840047 0.0 [{I|L}P]E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}{I|L}C{I|L};[{I|L}P]Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}C{I|L};HP{I|L}ED[RN]T{I|L};H{I|L}PED[RN]T{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[RN]E{I|L}C{I|L};{NN|[MP]|[D{I|L}]|[EV]}[YV]QQ{I|L}C{I|L};HP{I|L}{I|L}[C(Carbamidomethyl (C))K]{[ET]|[MV]}P;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[CP]|[EA]}[KA]{I|L}C{I|L};[{I|L}P]E[CS][KA]PH{I|L};H{I|L}P{I|L}[C(Carbamidomethyl (C))K]{[ET]|[MV]}P 5.6958;5.6072;5.402;4.8969;3.6645;3.3425;3.2583;3.1199;2.8429;2.7532 -;-;+;-;-;-;-;-;-;- + 461 1 1.99 160903.0 0.6600000262260437 1967 5084 7045 HBL1_DMSO_200M_050219_1,7053 HBL1_DMSO_200M_050219_1,7053,HPLEDRNTI True True HPLEDRNTI 37.072974 547.783862292767 17040442.0 7045.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 6.381898403167725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7054 37.087 800.0 183360.0 25 0 63332.0 -1 0 116 579.288625602905 578.2813491363049 1 579.2891113162041 MULTI CID FTMS 0 0 0 7045 99129.984375 0.3089453591572176 -4 0.1557197570800781 9 3 {[RE]|[WV]}Q{M(Oxidation (M))|F} 4 -1 + 38.833 0.0 0.0 6.7152 6.7152 90.904 0.0 0.0 0.0 12.971062485323516 26.84303988856093 12.971062485323516 9.719712763997563 0 0.484825539911597 0.0 0.4247425010840047 0.6549471895720984 {[RE]|[WV]}Q{M(Oxidation (M))|F};{[RE]|[WV]}[AG]{M(Oxidation (M))|F};{M(Oxidation (M))|F}ERQ;{M(Oxidation (M))|F}[Y{I|L}]H;{[RE]|[WV]}{M(Oxidation (M))|F}Q;{[RE]|[WV]}{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[RE]|[WV]} 6.7152;5.0344;3.1911;2.604;2.2966;1.9486;0.34699 -;-;-;-;-;-;- 81 1 1.99 115031.9 0.6200000047683716 1968 5084 7045 HBL1_DMSO_200M_050219_1,7054 HBL1_DMSO_200M_050219_1,7054, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7055 37.101 800.0 73514.0 25 0 6184.0 + 13989 HYYEGGNSQY 10 106 609.2467718965647 1216.4789908599294 2 609.2469360232353 MULTI CID FTMS 0 0 0 7045 93954.8125 1.0 0 0.0 10 Unmodified _HYYEGGNSQY_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-3|SS18L1;nc|ENSG00000184402|O75177-4|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 17.11289562659939 0.5604042439455784 3 PNS[YQ] 5 6 21.44 0.0 0.0 1.7625 0.0 0.0 609.2230702130875 0.0 609.2230702130875 0.0 5.955612550363796 0.0 0.0 0 0.0 0.0 0.5 0.3252574989159953 PNS[YQ] 1.7625 - 373 1 1.99 50771.8 0.6000000238418579 1969 5084 7045 HBL1_DMSO_200M_050219_1,7055 HBL1_DMSO_200M_050219_1,7055,HYYEGGNSQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7056 37.114 800.0 593850.0 25 0 85259.0 + 39158 TYPEESRSY 9 165 566.2509764518932 1130.4873999705862 2 566.2508422732353 MULTI CID FTMS 0 0 0 7045 97569.265625 0.0226478751469906 -4 0.1557197570800781 11 Unmodified _TYPEESRSY_ ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13 72.96794272382148 0.0199516581995792 3 TYPEESRSY 9 0 + 98.971 0.0 0.0 8.7547 8.7547 84.943 0.0 0.0 0.0 53.70060056197984 9.832881222565248 9.832881222565248 1.7339374311232802 0 0.5138793319624578 2.0 1.1861818737241734 1.0189301784845295 + + TYPEESRSY;TYPEERSSY;TYPEEYK{[DS]|[MA]|[CV]|TT};TYPE[QP]{M(Oxidation (M))|F}SY;TYPEY[MT]{I|L}N;[EP]EREEP[{M(Oxidation (M))|F}V];TYPEYEK{[DS]|[MA]|[CV]|TT};TYPE[YR]T{[DS]|[MA]|[CV]|TT};TY[HM]SSRSY;TYP[NG]STQTY 8.7547;8.6014;6.9783;6.7277;6.5351;6.4701;6.36;6.3335;6.2816;6.2683 +;-;-;-;-;-;-;-;-;- + 3847 + 1 1.99 361691.9 0.6100000143051147 1970 5084 7045 HBL1_DMSO_200M_050219_1,7056 HBL1_DMSO_200M_050219_1,7056,TYPEESRSY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7058 37.119 51.0 1135500.0 25 0 109030.0 + 18 AAAIPEAKP 9 70 434.25035221775966 866.4861515023193 2 434.2503845095634 MULTI CID FTMS 0 0 0 7057 1056945.625 0.0753310012781983 18 -0.9361114501953124 1 Unmodified _AAAIPEAKP_ REV__ENST00000444241.1_1_1:76209858-76210371:-|nuORF 15.847184025352805 0.4077185912009129 3 AAA 3 -1 27.932 0.0 0.0 3.2236 0.0 0.0 0.0 650.3518490943693 650.3518490943693 -2.2454626555970947 0.0 -2.2454626555970947 0.0 0 0.5 1.3979400086720375 0.0 0.0 AAA 3.2236 + + 95 1 1.999 51505.2 1.0 1971 5085 7057 HBL1_DMSO_200M_050219_1,7058 HBL1_DMSO_200M_050219_1,7058,AAAIPEAKP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7059 37.121 55.0 1258400.0 25 0 134110.0 + 33246 SFPASSGVSH 10 76 488.2303025289275 974.446052124655 2 488.2304870486259 MULTI CID FTMS 0 0 0 7057 1033152.625 0.7130337268443852 -3 0.1941337585449218 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 36.12702656103203 0.1984647928738587 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[SA]|[TG]}S[VG]SH 10 0 + 54.002 0.0 0.0 5.5418 5.5418 81.891 0.0 0.0 0.0 17.412581433031846 16.532125137753432 16.532125137753432 4.886831541432315 0 0.3494850021680094 2.0 0.6861818737241735 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[SA]|[TG]}S[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[CA]|SS}{[QV]|[N{I|L}]|[RA]|[KV]}SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YV][EP]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[CA]|SS}[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP][MN]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[YV]PDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RN]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H;[PA]S[SG]A[RN]DT;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}PDT 5.5418;5.0403;4.689;4.2021;4.1026;3.9207;3.4126;3.272;1.7283;1.5596 +;-;-;-;-;-;-;-;-;- + 256 + 1 1.999 59319.8 1.0 1972 5085 7057 HBL1_DMSO_200M_050219_1,7059 HBL1_DMSO_200M_050219_1,7059,SFPASSGVSH False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7060 37.122 45.0 1467200.0 25 0 200060.0 + 26671 NYINQGVSH 9 88 516.248612812042 1030.482672690884 2 516.2486450076103 MULTI CID FTMS 0 0 0 7057 1232549.25 0.2950220518675915 -3 0.1941337585449218 3 Unmodified _NYINQGVSH_ ENSG00000205339|ENST00000379719|IPO7 68.08070601005525 0.0218408846571049 3 [YN]{I|L} 3 6 39.538 0.0 0.0 3.8368 0.0 0.0 0.0 637.2699095895745 637.2699095895745 5.183240267568294 0.0 0.0 0.0 0 1.0 2.0 0.0 0.535666875892183 + [YN]{I|L} 3.8368 + + 245 1 1.999 55605.8 1.0 1973 5085 7057 HBL1_DMSO_200M_050219_1,7060 HBL1_DMSO_200M_050219_1,7060,NYINQGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7061 37.123 52.0 1374200.0 25 0 64472.0 6088 DSRITHQI 8 98 485.2598432973502 968.5051336615004 2 485.2595397830009 MULTI CID FTMS 0 0 0 7057 827292.5625 0.1711815216028346 -3 0.1941337585449218 4 Unmodified _DSRITHQI_ ENSG00000100029|ENST00000354694|PES1;nc|ENSG00000100029|O00541-2|PES1 56.17704186161178 0.1143274477948619 3 [AG]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SHQ{I|L} 9 5 + 56.511 0.0 0.0 5.8348 5.8348 87.213 0.0 0.0 0.0 13.925449767853308 16.478174818886373 13.925449767853308 9.208187539523747 0 0.6139829889124311 2.0 0.7059771852360797 0.0 [AG]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SHQ{I|L};[AG]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SH[AG]{I|L};[Q{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SHQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QN]|[E{I|L}]|[KN]}SHQ{I|L};[AG]{[ET]|[MV]}[{I|L}T]HQ{I|L};[Q{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SH[AG]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}D[{I|L}T]HQ{I|L};[{M(Oxidation (M))|F}V]Q[TP]HQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QN]|[E{I|L}]|[KN]}SH[AG]{I|L};{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[TP]HQ{I|L} 5.8348;4.8841;4.397;3.7225;3.6347;3.4407;3.1976;2.8586;2.7662;2.6532 -;-;-;-;-;-;-;-;-;- 363 1 1.999 59021.6 1.0 1974 5085 7057 HBL1_DMSO_200M_050219_1,7061 HBL1_DMSO_200M_050219_1,7061,DSRITHQI True True SYQGRASSL 37.123414 485.259539783001 12298343.0 7057.0 nc|ENSG00000130305|Q96P11-5|NSUN5;;nc|ENSG00000130305|Q96P11-3|NSUN5;;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;;ENSG00000130305|ENST00000438747|NSUN5;;nc|ENSG00000130305|Q96P11|NSUN5;;nc|ENSG00000130305|Q96P11-4|NSUN5 3.668262243270874 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7062 37.125 81.0 674930.0 25 0 42447.0 + 28902 QAPPPPQQV 9 101 481.2587808144996 960.5030086957992 2 481.2587768435478 MULTI CID FTMS 0 0 0 7057 764162.3125 0.0612351987938266 37 -2.5638427734375 5 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 65.23502041540118 0.0231836506122253 3 [QA]PPPPQQV 9 0 + 54.349 0.0 0.0 5.6584 5.6584 76.633 0.0 0.0 0.0 38.4852298269803 0.2791321868542269 0.2791321868542269 1.249387366082999 0 1.8979400086720373 1.6989700043360187 0.0 0.6861818737241735 + + [QA]PPPPQQV;[QA]PPPPAGQV;[QA]PPPPQ[AG]V;[QA]PPPPAG[AG]V;[QA][YK]PQQV;[QA][YK]PAGQV 5.6584;5.5283;4.2575;3.8598;2.6958;2.5601 +;-;-;-;-;- + 754 + 1 1.999 48652.4 1.0 1975 5085 7057 HBL1_DMSO_200M_050219_1,7062 HBL1_DMSO_200M_050219_1,7062,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7063 37.127 78.0 1198300.0 25 0 106240.0 + 6089 DSRITHQI 8 127 323.8420141474428 968.5042130425284 3 323.8417541384697 MULTI CID FTMS 0 0 0 7057 746085.5625 0.1674869959915484 -3 0.1941337585449218 6 Unmodified _DSRITHQI_ ENSG00000100029|ENST00000354694|PES1;nc|ENSG00000100029|O00541-2|PES1 29.081581746732265 0.4323690340403521 3 [Q{I|L}]QQP{[QN]|[E{I|L}]|[KN]}N 8 7 + 19.772 0.0 0.0 2.0414 2.0414 73.969 0.0 0.0 0.0 3.0719686320084385 6.276965572717389 3.0719686320084385 5.7829912054328965 0 0.2887254899964357 0.0 0.0 0.5 [Q{I|L}]QQP{[QN]|[E{I|L}]|[KN]}N;{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}THQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}T]H{[QN]|[E{I|L}]|[KN]}N;[HT]{[QN]|[E{I|L}]|[KN]}[QT]Q{I|L};[HT]{[QN]|[E{I|L}]|[KN]}G[TA]Q{I|L};[HT][VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}T]HDQ{I|L} 2.0414;1.4443;0.67462;0.67373;0.53916;0.1811;0.14846 -;-;-;-;-;-;- 341 1 1.999 77949.4 1.0 1976 5085 7057 HBL1_DMSO_200M_050219_1,7063 HBL1_DMSO_200M_050219_1,7063,DSRITHQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7064 37.131 209.0 297800.0 25 0 43715.0 38757 TVAVASAQR 9 103 451.7557944983163 901.4970360634326 2 451.7561828494072 MULTI CID FTMS 0 0 0 7057 286628.125 0.6529047538237079 -1 0.0867080688476562 7 Unmodified _TVAVASAQR_ ENSG00000102001|ENST00000323022|CACNA1F;nc|ENSG00000102001|O60840-5|CACNA1F;nc|ENSG00000102001|O60840-6|CACNA1F;nc|ENSG00000102001|O60840-7|CACNA1F;nc|ENSG00000102001|O60840|CACNA1F 34.10243960390752 0.1078313939113124 3 [TA]VV 4 6 36.95 0.0 0.0 4.0988 0.0 0.0 0.0 528.2517794244749 528.2517794244749 22.34636880228201 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [TA]VV 4.0988 - 194 + 1 1.999 50856.1 1.0 1977 5085 7057 HBL1_DMSO_200M_050219_1,7064 HBL1_DMSO_200M_050219_1,7064,TVAVASAQR True False ATVGRVSNV 37.130972 451.756182849407 2070126.5 7057.0 ENSG00000112651|ENST00000388752|MRPL2;;ENST00000485654.1_1_6:43022014-43023405:-|nuORF 1.8451109727223716 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7065 37.136 243.0 266100.0 25 0 16804.0 29232 QGSRYWASV 9 121 527.2602519241204 1052.5059509150408 2 527.2603027224541 MULTI CID FTMS 0 0 0 7057 252353.515625 0.7501397110174214 1 -0.0618209838867187 8 Unmodified _QGSRYWASV_ ENST00000415992.5_1_9:139693810-139699267:+|nuORF 15.847184025352805 0.4077185912009129 3 [VS]QVYKY 7 8 36.648 0.0 0.0 3.482 0.0 0.0 0.0 182.05316706177828 182.05316706177828 23.883622483540243 0.0 0.0 0.0 0 1.3494850021680094 1.3979400086720375 0.0 0.0 [VS]QVYKY 3.482 - 492 1 1.999 55132.6 1.0 1978 5085 7057 HBL1_DMSO_200M_050219_1,7065 HBL1_DMSO_200M_050219_1,7065,QGSRYWASV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7066 37.142 376.0 391120.0 25 0 50374.0 + 43119 VYPERSTSY 9 108 551.2639447778929 1100.5133366225857 2 551.2643310427666 MULTI CID FTMS 0 0 0 7057 233987.875 0.0525465572024739 -13 0.4193878173828125 9 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 34.40172386719151 0.1061884637610825 3 VYPE 4 5 58.928 0.0 0.0 5.3546 0.0 0.0 0.0 609.2640824189779 609.2640824189779 41.87067416673728 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + VYPE 5.3546 + + 594 + 1 1.999 115837.5 1.0 1979 5085 7057 HBL1_DMSO_200M_050219_1,7066 HBL1_DMSO_200M_050219_1,7066,VYPERSTSY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7067 37.156 800.0 67323.0 25 0 7867.2 -1 0 64 648.2853725945213 1941.834288383764 3 648.6201660037041 MULTI CID FTMS 0 0 0 7057 157971.21875 1.0 0 0.0 10 3 Y 1 -1 11.42 0.0 0.0 0.5881 0.0 0.0 1760.7603117986057 0.0 1760.7603117986057 0.0 4.430283238465815 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.5881 - 9 + 1 1.999 48511.4 0.7099999785423279 1980 5085 7057 HBL1_DMSO_200M_050219_1,7067 HBL1_DMSO_200M_050219_1,7067, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7068 37.163 357.0 389840.0 25 0 10422.0 + 24070 LYDSQCGSPFA 11 156 594.2571294004479 1186.4997058676956 2 594.2587158083916 MULTI CID FTMS 0 0 0 7057 159818.515625 0.2450040035615745 -3 0.1941337585449218 11 Unmodified _LYDSQCGSPFA_ REV__ENST00000522969.1_1_8:1808097-1817553:+|nuORF 27.628801355627647 0.4434699450731472 3 {[QG]|[NA]}G[HS]NQQNA 10 -1 75.742 0.0 0.0 6.3837 0.0 0.0 0.0 162.05229310818314 162.05229310818314 24.028033478235784 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 1.416386562212267 2.6747425010840047 {[QG]|[NA]}G[HS]NQQNA 6.3837 - 5701 1 1.999 106156.8 1.0 1981 5085 7057 HBL1_DMSO_200M_050219_1,7068 HBL1_DMSO_200M_050219_1,7068,LYDSQCGSPFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7069 37.176 800.0 217210.0 25 0 16363.0 + 17854 KQLEDGRTL 9 182 530.2939627590941 1058.5733725849882 2 530.2957031130791 MULTI CID FTMS 0 0 0 7057 128431.6328125 0.9199710095162028 3 -0.1497383117675781 12 Unmodified _KQLEDGRTL_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF 27.22323531849824 0.1848086127304535 3 KQ{I|L}C(Carbamidomethyl (C)) 4 6 43.418 0.0 0.0 4.1015 0.0 0.0 0.0 526.2854879087104 526.2854879087104 5.021404773859359 0.0 0.0 0.0 0 1.274227503252014 0.0 0.0 0.3252574989159953 KQ{I|L}C(Carbamidomethyl (C)) 4.1015 - 839 + 1 1.999 134619.8 0.6800000071525574 1982 5085 7057 HBL1_DMSO_200M_050219_1,7069 HBL1_DMSO_200M_050219_1,7069,KQLEDGRTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7071 37.181 47.0 1010200.0 25 0 153240.0 + 3855 DAKLDKSQI 9 71 509.2821408722221 1016.5497288112442 2 509.2823669314384 MULTI CID FTMS 0 0 0 7070 1215711.375 0.2823971113858839 2 -0.0879173278808593 1 Unmodified _DAKLDKSQI_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000425843.1_1_X:120337800-120338163:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 70.92866715596459 0.0207399673367505 3 DAK{I|L}DKSQ{I|L} 9 0 + 85.449 0.0 0.0 8.4058 8.4058 95.505 0.0 0.0 0.0 73.66611840698393 13.270925447448477 13.270925447448477 13.015384402724608 0 1.9802046884880933 1.5228787452803376 0.4247425010840047 0.7302046884880937 + + DAK{I|L}DKSQ{I|L};DAK{I|L}DKS[AG]{I|L};{I|L}[NS]{I|L}DKSQ{I|L};{I|L}[NS]{I|L}DKS[AG]{I|L} 8.4058;7.1254;5.3116;4.0313 +;-;-;- + 215 + 1 1.999 43107.5 1.0 1983 5086 7070 HBL1_DMSO_200M_050219_1,7071 HBL1_DMSO_200M_050219_1,7071,DAKLDKSQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7072 37.184 140.0 452300.0 25 0 69726.0 + 3335 AYMPPTSEA 9 102 491.7128300158537 981.4111070985074 2 491.7128784060478 MULTI CID FTMS 0 0 0 7070 328351.53125 0.3271254446381559 2 -0.0879173278808593 2 Oxidation (M) _AYM(Oxidation (M))PPTSEA_ ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP 40.44857923139169 0.0729940656229577 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F} 3 6 23.161 0.0 0.0 2.3599 0.0 0.0 0.0 597.2514140655574 597.2514140655574 -1.6432001766079232 0.0 -1.6432001766079232 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F} 2.3599 + + 164 1 1.999 51136.6 1.0 1984 5086 7070 HBL1_DMSO_200M_050219_1,7072 HBL1_DMSO_200M_050219_1,7072,AYMPPTSEA True False AYMPPTSEA 37.183617 491.712878406048 11430624.0 7070.0 nc|ENSG00000231925|O15533-4|TAPBP;;nc|ENSG00000231925|O15533-3|TAPBP;;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;;nc|ENSG00000231925|O15533-2|TAPBP;;ENSG00000231925|ENST00000434618|TAPBP 5.91792647043864 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7073 37.197 800.0 186220.0 25 0 27695.0 -1 0 101 635.6366625030181 1903.8881581092544 3 635.6367065310478 MULTI CID FTMS 0 0 0 7070 148454.671875 0.7878676283399858 -1 0.0618209838867187 3 3 {[VA]|[{I|L}G]}VTGAV 7 -1 18.873 0.0 0.0 0.99127 0.0 0.0 0.0 1303.5186278752838 1303.5186278752838 6.47685437114362 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.9802046884880936 0.0 {[VA]|[{I|L}G]}VTGAV 0.99127 - 352 1 1.999 120075.3 0.6800000071525574 1985 5086 7070 HBL1_DMSO_200M_050219_1,7073 HBL1_DMSO_200M_050219_1,7073, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7074 37.204 352.0 177740.0 25 0 12305.0 -1 KNMKEMEF 8 110 536.7437875906351 0 536.7439453005791 PEAK CID FTMS 0 0 0 7070 146861.796875 0.6445652129934358 -2 0.148529052734375 4 Oxidation (M) _KNM(Oxidation (M))KEMEF_ ENSG00000147606|ENST00000276609|SLC26A7;nc|ENSG00000147606|Q8TE54-2|SLC26A7 9.347437153973935 0.5488964601725408 3 QQA 3 -1 10.802 0.0 0.0 1.0081 0.0 0.0 351.18871560906774 390.1052340143188 741.2939496233865 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QQA 1.0081 - 65 + 1 1.999 55703.0 1.0 1986 5086 7070 HBL1_DMSO_200M_050219_1,7074 HBL1_DMSO_200M_050219_1,7074,KNMKEMEF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7075 37.218 800.0 222180.0 25 0 32982.0 + 10177 FQDDDQTRV 9 149 562.2543869025285 1122.494220871857 2 562.2540771365166 MULTI CID FTMS 0 0 0 7070 103096.5859375 0.4491397284406268 -2 0.148529052734375 5 Unmodified _FQDDDQTRV_ ENSG00000007923|ENST00000377577|DNAJC11;ENST00000472414.1_1_1:6698189-6705162:-|nuORF;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;nc|ENSG00000007923|Q9NVH1-3|DNAJC11 67.83816525789305 0.0219346420158844 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KVDDDQE 9 5 + 78.81 0.0 0.0 7.0209 7.0209 82.447 0.0 0.0 0.0 2.191419178489724 2.191419178489724 2.191419178489724 2.191419178489724 0 0.3807196863200844 0.7958800173440752 0.7742275032520141 1.6861818737241734 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KVDDDQE;{M(Oxidation (M))|F}QDDDQTRV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KVDDD[AG]E;{M(Oxidation (M))|F}QDDD[AG]TRV;{M(Oxidation (M))|F}[AG]DDDQTRV;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}DQDVQE;{M(Oxidation (M))|F}[AG]DDD[AG]TRV;{M(Oxidation (M))|F}QDDDVW[KA];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KDDVDQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KDDDVQE 7.0209;6.8257;6.2006;6.0054;6.0054;5.2473;5.1889;5.1346;5.0113;4.7431 -;+;-;-;-;-;-;-;-;- + 726 1 1.999 133148.9 0.6100000143051147 1987 5086 7070 HBL1_DMSO_200M_050219_1,7075 HBL1_DMSO_200M_050219_1,7075,FQDDDQTRV True True FQDDDQTRV 37.217649 562.254077136517 1387921.5 7070.0 nc|ENSG00000007923|Q9NVH1-3|DNAJC11;;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;;ENST00000472414.1_1_1:6698189-6705162:-|nuORF;;ENSG00000007923|ENST00000377577|DNAJC11 7.755677064259847 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7077 37.223 78.0 1031900.0 25 0 195590.0 28167 PPSPPPPPP 9 81 441.73979431227787 881.4650356913558 2 441.7397033572197 MULTI CID FTMS 0 0 0 7076 835303.8125 0.7695344892650405 -1 0.0412101745605468 1 Unmodified _PPSPPPPPP_ ENSG00000100312|ENST00000216139|ACR;ENSG00000163092|ENST00000409195|XIRP2;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000230859.7_2_5:6713434-6713641:+|nuORF;ENST00000395348.7_1_10:61444064-61469743:-|nuORF;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2;REV__ENSG00000110786|ENST00000358540|PTPN5;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENST00000430014.1_1:144520944-144521145:-|nuORF;REV__nc|ENSG00000110786|P54829-2|PTPN5;REV__nc|ENSG00000110786|P54829-3|PTPN5 98.80718514221952 0.0113971232682052 3 [PS]PPPP[YK] 8 3 + 72.497 0.0 0.0 8.2246 8.2246 96.602 0.0 0.0 0.0 20.66946789630613 57.02561882712928 20.66946789630613 22.21848749616356 0 1.3494850021680094 2.0 1.5356668758921828 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[YK]SPP[YK];[PS][YK]P[YK];{[HG]|PP}PSPP[YK];[PS]P[YK][YK];[YK]PSP[YK];{[HG]|PP}PPSP[YK];[PS]{M(Oxidation (M))|F}[Q{I|L}][YK];[YK]PPS[YK] 8.2246;5.7039;5.248;5.1944;5.1822;3.9196;3.8284;3.7626;3.1461;2.1216 -;-;-;-;-;-;-;-;-;- 168 1 1.999 65835.2 1.0 1988 5087 7076 HBL1_DMSO_200M_050219_1,7077 HBL1_DMSO_200M_050219_1,7077,PPSPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7078 37.237 800.0 47009.0 25 0 3601.0 -1 0 63 983.748628752162 2948.224056856686 3 984.0797607302666 MULTI CID FTMS 0 0 0 7076 64804.484375 0.5054995106481261 6 -0.1747665405273437 2 3 V 1 -1 4.6041 0.0 0.0 0.15616 0.0 0.0 2099.850718088911 746.2949312799436 2846.1456493688547 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.15616 - 28 + 1 1.999 32369.0 0.4799999892711639 1989 5087 7076 HBL1_DMSO_200M_050219_1,7078 HBL1_DMSO_200M_050219_1,7078, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7079 37.251 800.0 153560.0 25 0 12077.0 + 13633 HPRPGPVSPV 10 154 521.7933708714727 0 521.7932006716728 PEAK CID FTMS 0 0 0 7076 109926.765625 0.9262003239384684 1 -0.0467071533203125 3 Unmodified _HPRPGPVSPV_ ENST00000390672.2_3_19:5783973-5784096:-|nuORF;ENST00000419421.2_2_19:5783973-5784567:-|nuORF 29.84058131909904 0.2190118766058498 3 SE 2 9 18.588 0.0 0.0 1.7846 0.0 0.0 740.4080175224391 82.06694971256093 822.474967235 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.2887254899964357 0.0 SE 1.7846 - 109 + 1 1.999 102365.6 0.6299999952316284 1990 5087 7076 HBL1_DMSO_200M_050219_1,7079 HBL1_DMSO_200M_050219_1,7079,HPRPGPVSPV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7080 37.264 800.0 66032.0 25 0 15602.0 -1 0 34 1076.0975255688522 3225.2707473067567 3 1076.763232409954 MULTI CID FTMS 0 0 0 7076 101150.2421875 0.4060752503260117 -3 0.1897392272949218 4 3 E 1 -1 6.9897 0.0 0.0 0.21672 0.0 0.0 2569.039982339297 524.1630953424436 3093.203077681741 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21672 - 7 + 1 1.999 53578.1 0.449999988079071 1991 5087 7076 HBL1_DMSO_200M_050219_1,7080 HBL1_DMSO_200M_050219_1,7080, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7082 37.269 24.0 3016500.0 25 0 690200.0 -1 0 46 952.9516489946288 1903.8887450560576 2 952.9521362185478 MULTI CID FTMS 0 0 0 7081 2769338.0 0.7861649583836219 1 -0.0485115051269531 1 3 VKNV 4 -1 15.037 0.0 0.0 0.78981 0.0 0.0 965.3373057023452 495.2570894830688 1460.594395185414 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VKNV 0.78981 - 27 + 1 1.999 59165.7 1.0 1992 5088 7081 HBL1_DMSO_200M_050219_1,7082 HBL1_DMSO_200M_050219_1,7082, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7083 37.271 101.0 540880.0 25 0 71124.0 + + 1026 DGAPPSNQI 9 98 449.71701227957 897.41947162594 2 449.7167236208916 MULTI CID FTMS 0 0 0 7081 753861.0 1.0 0 0.0 2 Unmodified _AGDLEEKH_ ENSG00000112245|ENST00000626021|PTP4A1 39.957323273325 0.2350051964751539 3 [DG]A{I|L} 4 -1 37.792 0.0 0.0 4.2112 0.0 0.0 0.0 538.2245918254118 538.2245918254118 22.57515625508539 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 0.3054621874040891 0.0 [DG]A{I|L} 4.2112 - 188 1 1.999 48491.4 1.0 1993 5088 7081 HBL1_DMSO_200M_050219_1,7083 HBL1_DMSO_200M_050219_1,7083,AGDLEEKH False False DGAPPSNQI 37.270909 449.716723620892 58267800.0 7081.0 ENSG00000112245|ENST00000626021|PTP4A1 5.00835657119751 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7084 37.273 90.0 559690.0 25 0 49187.0 + 39486 VARPSSGTTI 10 77 494.7747072701538 987.5348616071076 2 494.7747070193291 MULTI CID FTMS 0 0 0 7081 566577.5625 0.0709275226836852 -7 0.368896484375 3 Unmodified _VARPSSGTTI_ ENST00000381140.8_3_13:27998935-28001286:+|nuORF;ENST00000466776.5_1_13:27998904-28001286:+|nuORF 36.506200033944 0.1944608063770638 3 TT{I|L} 3 7 41.242 0.0 0.0 4.1763 0.0 0.0 654.3451866505708 0.0 654.3451866505708 0.0 23.283409326844264 0.0 0.0 0 0.9247425010840048 0.0 0.8807196863200843 0.0 + TT{I|L} 4.1763 + + 53 1 1.999 45579.2 1.0 1994 5088 7081 HBL1_DMSO_200M_050219_1,7084 HBL1_DMSO_200M_050219_1,7084,VARPSSGTTI False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7085 37.275 103.0 677910.0 25 0 45054.0 -1 DAEMTTRMV 9 118 535.2362804984871 1068.458008063774 2 535.2361938357353 MULTI CID FTMS 0 0 0 7081 500354.28125 0.1000765005646318 -7 0.368896484375 4 Oxidation (M) _DAEMTTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 31.26834338654808 0.1333407332142048 3 {[DA]|[EG]}EMS[RP]TY 9 -1 + 56.262 0.0 0.0 5.2657 5.2657 77.853 0.0 0.0 0.0 16.836900161818782 2.970476952151124 2.970476952151124 2.970476952151124 0 0.9247425010840048 2.0 0.9143943297944483 0.0 {[DA]|[EG]}EMS[RP]TY;{[DA]|[EG]}EMTTR{M(Oxidation (M))|F}V;WE[W{M(Oxidation (M))|F}]R{M(Oxidation (M))|F}V;WEM{[CT]|[{M(Oxidation (M))|F}G]}[{I|L}T]SV;[YT]RT[PA]E[EC];[YT]R[W{M(Oxidation (M))|F}][C(Carbamidomethyl (C))H];[YT]RP[TA]E[EC];[QP]Q[PA][PA]E[EC] 5.2657;4.9877;2.1913;1.365;0.85677;0.40026;0.16384;0.12848 -;+;-;-;-;-;-;- + 211 + 1 1.999 54962.3 1.0 1995 5088 7081 HBL1_DMSO_200M_050219_1,7085 HBL1_DMSO_200M_050219_1,7085,DAEMTTRMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7086 37.278 125.0 515970.0 25 0 53083.0 + 34802 SQEGRPVQV 9 97 500.2644937104114 998.5144344876228 2 500.2651244997978 MULTI CID FTMS 0 0 0 7081 500782.03125 0.026444226093678 18 -0.94818115234375 5 Unmodified _SQEGRPVQV_ ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 51.629811660486645 0.0367964933207742 3 {[QS]|[NT]}E 3 6 37.734 0.0 0.0 3.779 0.0 0.0 0.0 651.3573049312354 651.3573049312354 1.2192268917752642 0.0 0.0 0.0 0 1.0 1.0969100130080565 0.3054621874040891 0.3252574989159953 + {[QS]|[NT]}E 3.779 + + 129 1 1.999 54509.7 1.0 1996 5088 7081 HBL1_DMSO_200M_050219_1,7086 HBL1_DMSO_200M_050219_1,7086,SQEGRPVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7087 37.291 767.0 283710.0 25 0 21111.0 + -1 HLCCWCGSI 9 195 539.7177785547001 1077.4210041762 2 539.7181274294853 MULTI CID FTMS 0 0 0 7081 243258.609375 0.0643799240132058 -6 0.3438720703125 6 Carbamidomethyl (C) _HLCC(Carbamidomethyl (C))WCGSI_ REV__ENSG00000103657|ENST00000443617|HERC1 24.67388899826682 0.2172451872415813 3 SQVCCC{I|L} 7 -1 47.528 0.0 0.0 4.4113 0.0 0.0 323.12326522303823 0.0 323.12326522303823 0.0 18.81662116544505 0.0 0.0 0 0.805462187404089 0.0 1.403598431600422 0.2742275032520141 SQVCCC{I|L} 4.4113 - 1887 1 1.999 168373.3 1.0 1997 5088 7081 HBL1_DMSO_200M_050219_1,7087 HBL1_DMSO_200M_050219_1,7087,HLCCWCGSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7088 37.299 460.0 281630.0 25 0 21238.0 + 11443 GHWISTFYM 9 162 381.1750249111977 1140.503245333793 3 381.1750976443291 MULTI CID FTMS 0 0 0 7081 152071.234375 0.6465883891433335 -1 0.0467071533203125 7 Unmodified _GHWISTFYM_ ENSG00000257315|ENST00000550078|ZBED6 12.240655878213236 0.5053430591993562 3 {[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}HTY{[YD]|[{M(Oxidation (M))|F}M]} 9 6 + 29.56 0.0 0.0 2.5919 2.5919 72.92 0.0 0.0 0.0 7.120667555758974 8.512649075511195 7.120667555758974 4.247425010840047 0 0.0 2.0 0.5 0.0 {[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}HTY{[YD]|[{M(Oxidation (M))|F}M]};{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}THY{[YD]|[{M(Oxidation (M))|F}M]};{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}H[Y{M(Oxidation (M))|F}][MT];[H{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HY{[YD]|[{M(Oxidation (M))|F}M]} 2.5919;2.2194;1.7196;1.6549 -;-;-;- 582 1 1.999 107220.3 1.0 1998 5088 7081 HBL1_DMSO_200M_050219_1,7088 HBL1_DMSO_200M_050219_1,7088,GHWISTFYM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7089 37.313 800.0 158260.0 25 0 6965.7 + -1 EMETKQMQAF 10 147 629.7757750052342 1257.5369970772683 2 630.2755004763603 MULTI CID FTMS 0 0 0 7081 122389.0078125 0.0142058020374272 -9 0.4125862121582031 8 Oxidation (M) _EM(Oxidation (M))ETKQMQAF_ REV__ENSG00000137877|ENST00000320955|SPTBN5 27.628801355627647 0.3479284626772844 3 [AG]AHDEAGANQA{M(Oxidation (M))|F} 13 -1 + 96.412 0.0 0.0 7.6668 7.6668 83.043 0.0 0.0 0.0 8.644041336011014 16.642078980768062 8.644041336011014 1.5186375580366729 0 0.8807196863200843 2.0 0.7134679910804405 1.174742501084005 [AG]AHDEAGANQA{M(Oxidation (M))|F};[AG]AHDEAGAQNA{M(Oxidation (M))|F};[AG]AHDEQANQA{M(Oxidation (M))|F};[AG]AHDEAQNQA{M(Oxidation (M))|F};[AG]AHDEQAQNA{M(Oxidation (M))|F};[AG]AHDEAQQNA{M(Oxidation (M))|F};[AG]AHDEAGNAQA{M(Oxidation (M))|F};[QA]HDEAGANQA{M(Oxidation (M))|F};[AG]AHDEAGAN[AG]A{M(Oxidation (M))|F};[QA]HDEAGAQNA{M(Oxidation (M))|F} 7.6668;7.546;7.4263;7.378;7.3055;7.2572;7.0896;6.9794;6.9453;6.8586 -;-;-;-;-;-;-;-;-;- 7568 1 1.999 96509.5 0.75 1999 5088 7081 HBL1_DMSO_200M_050219_1,7089 HBL1_DMSO_200M_050219_1,7089,EMETKQMQAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7091 37.317 75.0 767530.0 25 0 89309.0 + 28117 PPPAPPPSAT 10 95 466.2462268697885 930.4779008063772 2 466.7490112185478 MULTI CID FTMS 0 0 0 7090 884767.1875 0.2056624083733366 18 -0.9563674926757812 1 Unmodified _PPPAPPPSAT_ REV__ENSG00000125903|ENST00000246105|DEFB129 24.67388899826682 0.4143206957119831 3 [{I|L}P]PPPP 6 -1 31.348 0.0 0.0 3.369 0.0 0.0 0.0 329.10855201170835 329.10855201170835 -3.521825181113627 0.0 -3.521825181113627 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P]PPPP 3.369 - 388 1 1.999 49565.3 1.0 2000 5089 7090 HBL1_DMSO_200M_050219_1,7091 HBL1_DMSO_200M_050219_1,7091,PPPAPPPSAT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7092 37.319 87.0 692460.0 25 0 82159.0 + 13577 HPLEDRNTI 9 61 547.7835114581994 1093.5524699831988 2 547.7832519412041 MULTI CID FTMS 0 0 0 7090 613075.375 0.7981956551369187 1 -0.0290412902832031 2 Unmodified _HPLEDRNTI_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 18.373094154950223 0.3393451798331396 3 HP{I|L}E[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}P 8 5 49.245 0.0 0.0 4.5032 0.0 0.0 0.0 82.06701074771718 82.06701074771718 49.24533159112684 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 HP{I|L}E[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}P 4.5032 - 60 + 1 1.999 56888.0 1.0 2001 5089 7090 HBL1_DMSO_200M_050219_1,7092 HBL1_DMSO_200M_050219_1,7092,HPLEDRNTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7093 37.321 56.0 897080.0 25 0 110520.0 + 17608 KPTAAFHLL 9 64 499.29290132073936 996.5712497082789 2 499.2931396365166 MULTI CID FTMS 0 0 0 7090 957105.25 1.0 0 0.0 3 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 3 KPT 3 -1 39.253 0.0 0.0 3.9388 0.0 0.0 0.0 667.3521028607212 667.3521028607212 27.034021960761265 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 KPT 3.9388 + + 68 + 1 1.999 47278.4 1.0 2002 5089 7090 HBL1_DMSO_200M_050219_1,7093 HBL1_DMSO_200M_050219_1,7093,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7094 37.324 175.0 438340.0 25 0 46073.0 + 12424 GTRNTTDYV 9 120 513.7460685831627 1025.4775842331253 2 513.7463256716728 MULTI CID FTMS 0 0 0 7090 613218.1875 0.0463470848911019 20 -1.124755859375 4 Unmodified _GTRNTTDYV_ REV__ENSG00000151914|ENST00000680361|DST;REV__ENST00000487754.2_1_6:56350034-56354383:-|nuORF;REV__nc|ENSG00000151914|Q03001-14|DST;REV__nc|ENSG00000151914|Q03001-8|DST;REV__nc|ENSG00000151914|Q03001|DST 29.081581746732265 0.1611639662936252 3 NV[C(Carbamidomethyl (C))R]DYV 7 -1 37.775 0.0 0.0 3.6837 0.0 0.0 101.04828078437656 0.0 101.04828078437656 0.0 23.4034122746594 0.0 0.0 0 1.6989700043360187 0.0 0.2742275032520141 0.6139829889124311 NV[C(Carbamidomethyl (C))R]DYV 3.6837 - 577 1 1.999 60390.5 1.0 2003 5089 7090 HBL1_DMSO_200M_050219_1,7094 HBL1_DMSO_200M_050219_1,7094,GTRNTTDYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7095 37.326 77.0 808350.0 25 0 54558.0 + + 16135 STIKEVAQA 9 111 473.7634774241764 945.5124019151529 2 473.7638732790947 MULTI CID FTMS 0 0 0 7090 598695.6875 0.7626407629774541 -1 0.0485115051269531 5 Unmodified _ITTSAIAAAQ_ ENST00000469778.1_1_9:94794749-94800706:-|nuORF;ENSG00000090054|ENST00000262554|SPTLC1 18.1463463914782 0.5430639438673815 3 VAQA 4 -1 20.93 0.0 0.0 2.2136 0.0 0.0 558.3033115221432 0.0 558.3033115221432 0.0 1.6347088481359116 0.0 0.0 0 0.4731975075880329 0.0 0.0 0.0 VAQA 2.2136 - 191 1 1.999 50767.6 1.0 2004 5089 7090 HBL1_DMSO_200M_050219_1,7095 HBL1_DMSO_200M_050219_1,7095,ITTSAIAAAQ False False STIKEVAQA 37.325806 473.763873279095 4175921.5 7090.0 ENST00000469778.1_1_9:94794749-94800706:-|nuORF;;ENSG00000090054|ENST00000262554|SPTLC1 2.961019357045492 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7096 37.328 111.0 784110.0 25 0 70766.0 6351 DVQAPRAKL 9 113 333.1980062446094 996.5721893340284 3 333.1978332400322 MULTI CID FTMS 0 0 0 7090 391532.65625 1.0 0 0.0 6 Unmodified _DVQAPRAKL_ ENSG00000185567|ENST00000333244|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2;ENSG00000185567|ENST00000333244|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2;nc|ENSG00000185567|Q8IVF2-3|AHNAK2 10.823927491677226 0.5436922275383211 3 KPT 3 8 20.005 0.0 0.0 2.0074 0.0 0.0 159.08951270940184 508.2636812799438 667.3531939893456 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 KPT 2.0074 - 64 + 1 1.999 74495.3 1.0 2005 5089 7090 HBL1_DMSO_200M_050219_1,7096 HBL1_DMSO_200M_050219_1,7096,DVQAPRAKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7097 37.342 800.0 279850.0 25 0 55642.0 -1 0 176 502.2825942808905 501.2753178142905 1 502.2811157107353 MULTI CID FTMS 0 0 0 7090 182682.359375 0.8061665199938302 1 -0.0290412902832031 7 3 {[DA]|[EG]}{I|L}{I|L}A 5 -1 + 12.544 0.0 0.0 2.5024 2.5024 76.269 0.0 0.0 0.0 0.1571000920248089 1.2849675592456131 0.1571000920248089 7.744930705343042 0 0.1171302707394362 1.2218487496163564 0.0 0.0 {[DA]|[EG]}{I|L}{I|L}A;{[QN]|[E{I|L}]|[KN]}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}{[VA]|[{I|L}G]}A;{NN|[MP]|[D{I|L}]|[EV]}RV 2.5024;0.95738;0.83976;0.49146 -;-;-;- 90 1 1.999 168126.9 0.9300000071525574 2006 5089 7090 HBL1_DMSO_200M_050219_1,7097 HBL1_DMSO_200M_050219_1,7097, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7099 37.358 800.0 190210.0 25 0 79954.0 -1 0 115 579.288625602905 578.2813491363049 1 579.2899047732353 MULTI CID FTMS 0 0 0 7098 226111.359375 0.7046914772767116 2 -0.0424156188964843 1 3 {[RE]|[WV]}Q{M(Oxidation (M))|F} 4 -1 + 47.039 0.0 0.0 8.1343 8.1343 94.244 0.0 0.0 0.0 20.22627381292211 14.235162698957282 14.235162698957282 9.719712763997563 0 0.3807196863200844 1.0 0.4247425010840047 0.5796896906561032 {[RE]|[WV]}Q{M(Oxidation (M))|F};{[RE]|[WV]}[AG]{M(Oxidation (M))|F};{[RE]|[WV]}{M(Oxidation (M))|F}Q;{M(Oxidation (M))|F}ERQ;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[RE]|[WV]} 8.1343;6.4535;4.6366;3.4182;0.59969 -;-;-;-;- 66 1 1.999 118722.5 0.949999988079071 2007 5090 7098 HBL1_DMSO_200M_050219_1,7099 HBL1_DMSO_200M_050219_1,7099, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7100 37.36 119.0 598720.0 25 0 108180.0 + 38280 TQAPQPAQV 9 99 470.2501899685829 938.4858270039656 2 470.2492858767509 MULTI CID FTMS 0 0 0 7098 377809.78125 0.6734056546875721 2 -0.0424156188964843 2 Unmodified _TQAPQPAQV_ ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400 29.081581746732265 0.1611639662936252 3 [KG]D{I|L} 4 9 16.044 0.0 0.0 1.7095 0.0 0.0 0.0 522.2374077769821 522.2374077769821 2.910166781925337 0.0 0.0 0.0 0 0.5 0.0 0.0 0.6307196863200843 [KG]D{I|L} 1.7095 - 265 1 1.999 61864.9 1.0 2008 5090 7098 HBL1_DMSO_200M_050219_1,7100 HBL1_DMSO_200M_050219_1,7100,TQAPQPAQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7101 37.368 430.0 314910.0 25 0 64275.0 + 5612 DPAPAHTSI 9 136 454.7269971180372 907.4394413028745 2 454.7270080447197 MULTI CID FTMS 0 0 0 7098 204080.40625 0.7868144599471579 -3 0.1242599487304687 3 Unmodified _DPAPAHTSI_ ENSG00000175455|ENST00000409697|CCDC14;nc|ENSG00000175455|Q49A88-2|CCDC14;nc|ENSG00000175455|Q49A88-3|CCDC14;nc|ENSG00000175455|Q49A88-5|CCDC14;nc|ENSG00000175455|Q49A88-6|CCDC14;nc|ENSG00000175455|Q49A88|CCDC14 49.55428908609986 0.0413471690215031 3 [DP]APA[HT]S{I|L} 9 0 + 49.693 0.0 0.0 5.4762 5.4762 75.415 0.0 0.0 0.0 0.8460550734051111 0.8460550734051111 0.8460550734051111 0.8460550734051111 0 0.9247425010840048 2.0 0.7134679910804405 0.0 + + [DP]APA[HT]S{I|L};[DP]A{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{[HG]|PP};[DP]APA[HT]TV;[DP]A[YR]{[WT]|[RM]};[DP]A{NN|[MP]|[D{I|L}]|[EV]}[HQ]{I|L};[PA]D{I|L}{NN|[MP]|[D{I|L}]|[EV]}A{[HG]|PP};[DP]A{NN|[MP]|[D{I|L}]|[EV]}[H{I|L}]Q;[DP]A[VS][HS]VP;[DP]A[VS][HS]PV;[PA]H[YR]A{[HG]|PP} 5.4762;5.3829;4.8544;4.6262;4.1433;4.1108;3.5324;3.37;3.0596;3.0117 +;-;-;-;-;-;-;-;-;- + 403 + 1 1.999 108554.8 1.0 2009 5090 7098 HBL1_DMSO_200M_050219_1,7101 HBL1_DMSO_200M_050219_1,7101,DPAPAHTSI True True DPAPAHTSI 37.367969 454.72700804472 1900032.625 7098.0 nc|ENSG00000175455|Q49A88-3|CCDC14;;nc|ENSG00000175455|Q49A88-2|CCDC14;;nc|ENSG00000175455|Q49A88-5|CCDC14;;nc|ENSG00000175455|Q49A88|CCDC14;;ENSG00000175455|ENST00000409697|CCDC14;;nc|ENSG00000175455|Q49A88-6|CCDC14 7.5446241696675616 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7102 37.375 363.0 199240.0 25 0 17762.0 + -1 NQMPTQPQV 9 116 529.7502103643354 1057.4858677954708 2 529.7497436404228 MULTI CID FTMS 0 0 0 7098 160295.75 1.0 0 0.0 4 Oxidation (M) _NQM(Oxidation (M))PTQPQV_ EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;ENSG00000100393|ENST00000263253|EP300 25.399314129420983 0.2080152500878129 3 Q{I|L}GCN 5 -1 20.723 0.0 0.0 1.9596 0.0 0.0 127.00712131285202 412.2317293756469 539.2388506884989 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L}GCN 1.9596 - 371 + 1 1.999 60533.3 1.0 2010 5090 7098 HBL1_DMSO_200M_050219_1,7102 HBL1_DMSO_200M_050219_1,7102,NQMPTQPQV False False NQMPTQPQV 37.374512 529.749743640423 2375451.25 7098.0 EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;;ENSG00000100393|ENST00000263253|EP300 6.562196731567383 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7104 37.379 17.0 2275500.0 25 0 788350.0 + + 28551 PTGARPSAL 9 55 435.245484841912 868.4764167506239 2 435.2454711794853 MULTI CID FTMS 0 0 0 7103 3672410.75 0.958024902470173 1 -0.0098075866699218 1 Unmodified _PTQRSAPL_ ENST00000473611.5_1_6:33247055-33247262:-|nuORF;ENSG00000227057|ENST00000374617|WDR46 15.847184025352805 0.6768015514314958 3 PT 2 -1 45.217 0.0 0.0 5.2064 0.0 0.0 0.0 667.3539130105544 667.3539130105544 32.74227503252014 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 PT 5.2064 + + 11 + 1 1.997 38700.8 1.0 2011 5091 7103 HBL1_DMSO_200M_050219_1,7104 HBL1_DMSO_200M_050219_1,7104,PTQRSAPL False False PTGARPSAL 37.378891 435.245471179485 24637280.0 7103.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 0.9005589485168457 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7105 37.38 21.0 2152800.0 25 0 342030.0 + 39159 TYPEESRSY 9 48 566.2509764518932 1130.4873999705862 2 566.2510864138603 MULTI CID FTMS 0 0 0 7103 2555981.5 0.5932969723529966 3 -0.0640907287597656 2 Unmodified _TYPEESRSY_ ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13 11.494710602746466 0.5255349189887087 3 [EP]EREEP[{M(Oxidation (M))|F}V] 9 7 + 57.91 0.0 0.0 5.1226 5.1226 84.735 0.0 0.0 0.0 1.7517364849543782 52.42538423561818 1.7517364849543782 9.208187539523747 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [EP]EREEP[{M(Oxidation (M))|F}V];[EP]E[VG]EEP[{M(Oxidation (M))|F}V];[EP]ERS[HM][{M(Oxidation (M))|F}V];[EP]E[VG]S[NG]P[{M(Oxidation (M))|F}V];[YT]PEE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]};[EP]WW[NG]P[{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}[HM]EEP[{M(Oxidation (M))|F}V];[YT][HM]S{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]};{[QD]|[EN]|[WG]|[KD]|[RS]}[HM]S[NG]P[{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}[HM]S[HM][{M(Oxidation (M))|F}V] 5.1226;4.308;3.4639;3.2311;2.6494;2.0716;1.9018;0.99077;0.82103;0.24322 -;-;-;-;-;-;-;-;-;- 90 1 1.997 43745.5 1.0 2012 5091 7103 HBL1_DMSO_200M_050219_1,7105 HBL1_DMSO_200M_050219_1,7105,TYPEESRSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7106 37.381 48.0 1230000.0 25 0 130860.0 + 33247 SFPASSGVSH 10 77 488.2303025289275 974.446052124655 2 488.2304870486259 MULTI CID FTMS 0 0 0 7103 1061900.125 0.7328739097626243 3 -0.0640907287597656 3 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 58.6788170122104 0.0400518768368984 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 74.416 0.0 0.0 7.6368 7.6368 86.341 0.0 0.0 0.0 45.48840924329106 14.146518864155126 14.146518864155126 3.521825181113627 0 0.3807196863200844 2.0 1.5994850021680094 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC{[QV]|[N{I|L}]|[RA]|[KV]}SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}CAPDT;{NN|[MP]|[D{I|L}]|[EV]}TRSAPDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD][WQ]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KT][YN]DT;{[QN]|[E{I|L}]|[KN]}[KQ]SH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{NN|[MP]|[D{I|L}]|[EV]}YYAP{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 7.6368;7.2754;5.2781;4.2843;3.3051;2.8825;1.6618;0.31768;0.1646 +;-;-;-;-;-;-;-;- + 172 + 1 1.997 49622.6 1.0 2013 5091 7103 HBL1_DMSO_200M_050219_1,7106 HBL1_DMSO_200M_050219_1,7106,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7107 37.384 152.0 502460.0 25 0 115330.0 -1 0 98 490.2871869096935 489.2799104430935 1 490.2850829958916 MULTI CID FTMS 0 0 0 7103 568137.0625 0.6988622088251276 -4 0.1568679809570312 4 3 H 1 -1 1.9897 0.0 0.0 0.40666 0.0 0.0 74.07518129445914 275.1141756647094 349.1893569591685 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.40666 - 7 + 1 1.997 63900.4 1.0 2014 5091 7103 HBL1_DMSO_200M_050219_1,7107 HBL1_DMSO_200M_050219_1,7107, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7109 37.389 24.0 2225300.0 25 0 376560.0 + 43120 VYPERSTSY 9 53 551.2639447778929 1100.5133366225857 2 551.2643310427666 MULTI CID FTMS 0 0 0 7108 2609793.25 0.5860801560668706 -6 0.2078857421875 1 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 34.40172386719151 0.1061884637610825 3 VYPE 4 5 58.928 0.0 0.0 5.3546 0.0 0.0 0.0 609.2644137018186 609.2644137018186 43.35470640367888 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + VYPE 5.3546 + + 37 + 1 1.997 48036.7 1.0 2015 5092 7108 HBL1_DMSO_200M_050219_1,7109 HBL1_DMSO_200M_050219_1,7109,VYPERSTSY True True VYPERSTSY 37.388697 551.264331042767 427193280.0 7108.0 ENST00000603963.1_1_12:120899824-120902572:-|nuORF;;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;;ENSG00000111786|ENST00000229390|SRSF9 7.362563133239746 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7110 37.39 34.0 1531400.0 25 0 131490.0 + 6090 DSRITHQI 8 98 323.8420141474428 968.5042130425284 3 323.8418151736259 MULTI CID FTMS 0 0 0 7108 1493515.75 0.3352758436919418 4 -0.1694374084472656 2 Unmodified _DSRITHQI_ ENSG00000100029|ENST00000354694|PES1;nc|ENSG00000100029|O00541-2|PES1 11.640296217721598 0.738950129755968 3 [{M(Oxidation (M))|F}V]QS 4 7 13.812 0.0 0.0 1.4261 0.0 0.0 0.0 504.2685030572876 504.2685030572876 1.1930513334409376 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [{M(Oxidation (M))|F}V]QS 1.4261 - 107 + 1 1.997 47305.0 1.0 2016 5092 7108 HBL1_DMSO_200M_050219_1,7110 HBL1_DMSO_200M_050219_1,7110,DSRITHQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7111 37.391 28.0 1919200.0 25 0 109800.0 23974 LVSWSHQI 8 75 485.2598432973502 968.5051336615004 2 485.2593566775322 MULTI CID FTMS 0 0 0 7108 1380626.875 0.2856762165419159 4 -0.1694374084472656 3 Unmodified _LVSWSHQI_ ENST00000341935.9_3_6:167536638-167536710:+|nuORF 32.30548876998284 0.3644845974844379 3 [AG]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HS]Q{I|L} 9 5 + 36.576 0.0 0.0 3.7765 3.7765 78.815 0.0 0.0 0.0 3.6304496843001104 18.665827977365627 3.6304496843001104 7.696727847285068 0 0.3252574989159953 2.0 0.2742275032520141 0.0 [AG]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HS]Q{I|L};{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[TP]HQ{I|L};{I|L}{[CA]|SS}{[RE]|[WV]}HQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H[PG]{[WT]|[RM]}{I|L};[Q{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HS]Q{I|L};[{M(Oxidation (M))|F}V]Q[TP]HQ{I|L};{I|L}E[Q{I|L}]{[DS]|[MA]|[CV]|TT}[HK];[{M(Oxidation (M))|F}V][AG][TP]HQ{I|L};{[WT]|[RM]}[VP][EP]Q{I|L};[{M(Oxidation (M))|F}V]Q[TP]H[AG]{I|L} 3.7765;2.9818;2.7528;2.5413;2.3387;2.2837;2.2129;1.3274;1.0275;0.9343 -;-;-;-;-;-;-;-;-;- 127 1 1.997 47650.6 1.0 2017 5092 7108 HBL1_DMSO_200M_050219_1,7111 HBL1_DMSO_200M_050219_1,7111,LVSWSHQI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7112 37.392 55.0 991520.0 25 0 135700.0 + 26672 NYINQGVSH 9 81 516.248612812042 1030.482672690884 2 516.2485839724541 MULTI CID FTMS 0 0 0 7108 1209428.0 0.2894877670373962 4 -0.1694374084472656 4 Unmodified _NYINQGVSH_ ENSG00000205339|ENST00000379719|IPO7 92.4914307365334 0.0139747738690111 3 [YN]{I|L}NQVGSH 9 2 + 91.169 0.0 0.0 8.8472 8.8472 88.765 0.0 0.0 0.0 66.95599931399222 14.973024840566469 14.973024840566469 3.979400086720375 0 0.805462187404089 2.0 1.031234684152075 1.1989700043360187 [YN]{I|L}NQVGSH;[YN]{I|L}NQGVSH;[YN]{I|L}GGQVGSH;[YN]{I|L}N[AG]VGSH;[YN]{I|L}GGQGVSH;[YN]{I|L}N[AG]GVSH;[YN]{I|L}GG[AG]VGSH;{[QN]|[E{I|L}]|[KN]}GVQN{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]{I|L}NQ{[HG]|PP}W;[YN]{I|L}GG[AG]GVSH 8.8472;8.461;7.9536;7.6145;7.5674;7.2283;5.9008;5.671;5.5195;5.5146 -;+;-;-;-;-;-;-;-;- + 430 + 1 1.997 48346.5 1.0 2018 5092 7108 HBL1_DMSO_200M_050219_1,7112 HBL1_DMSO_200M_050219_1,7112,NYINQGVSH True True NYINQGVSH 37.39247 516.248583972454 44045224.0 7108.0 ENSG00000205339|ENST00000379719|IPO7 8.396451473236084 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7114 37.397 121.0 519800.0 25 0 33451.0 + 28903 QAPPPPQQV 9 108 481.2587808144996 960.5030086957992 2 481.2588683962822 MULTI CID FTMS 0 0 0 7113 588305.5 0.0471431313147906 45 -2.733707427978516 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 46.020951573049366 0.0490941689151868 3 [QA]PPPPG 7 3 34.655 0.0 0.0 3.608 0.0 0.0 0.0 313.1511769909743 313.1511769909743 20.23007372609395 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.5709991640913001 [QA]PPPPG 3.608 - 550 1 1.997 55028.8 1.0 2019 5093 7113 HBL1_DMSO_200M_050219_1,7114 HBL1_DMSO_200M_050219_1,7114,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7115 37.409 715.0 331040.0 25 0 19845.0 + 5878 DPYKHKVNI 9 170 557.306021857312 1112.597490781424 2 557.3065673708916 MULTI CID FTMS 0 0 0 7113 295365.90625 0.198616187574767 -3 0.050506591796875 2 Unmodified _DPYKHKVNI_ ENSG00000198793|ENST00000361445|MTOR 118.89474601620944 0.0019711750475752 3 DPYKHKV{I|L}N 9 2 + 97.341 0.0 0.0 8.749 8.749 83.525 0.0 0.0 0.0 6.307196863200844 0.796896906561031 0.796896906561031 0.796896906561031 0 1.9802046884880933 1.6989700043360187 0.0 1.6549471895720984 DPYKHKV{I|L}N;DPYKHKVN{I|L};D{I|L}{M(Oxidation (M))|F}KHKV{I|L}N;D{I|L}{M(Oxidation (M))|F}KHKVN{I|L};{I|L}D{M(Oxidation (M))|F}KHKV{I|L}N;{I|L}D{M(Oxidation (M))|F}KHKVN{I|L};DPYKHKVGG{I|L};D{I|L}{M(Oxidation (M))|F}KHKVGG{I|L};{I|L}D{M(Oxidation (M))|F}KHKVGG{I|L};DPYKHKV[VG]A 8.749;8.6774;8.5025;8.4309;8.1821;8.1105;7.5356;7.2891;6.9687;6.8585 -;+;-;-;-;-;-;-;-;- + 2616 + 1 1.997 182656.4 1.0 2020 5093 7113 HBL1_DMSO_200M_050219_1,7115 HBL1_DMSO_200M_050219_1,7115,DPYKHKVNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7116 37.411 64.0 789250.0 25 0 126100.0 + 5946 DQHSAVDCGF 10 97 360.1477899645539 1077.4215404938618 3 360.1476928591728 MULTI CID FTMS 0 0 0 7113 595681.625 0.6096346767666643 -1 0.0080909729003906 3 Unmodified _DQHSAVDCGF_ REV__ENST00000421413.6_1_6:133646543-133785920:+|nuORF 5.296884461304476 0.7021353017287152 3 S{I|L} 2 -1 14.959 0.0 0.0 1.3884 0.0 0.0 859.2944480639775 0.0 859.2944480639775 0.0 2.000612056866311 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 S{I|L} 1.3884 - 41 + 1 1.997 47958.2 1.0 2021 5093 7113 HBL1_DMSO_200M_050219_1,7116 HBL1_DMSO_200M_050219_1,7116,DQHSAVDCGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7117 37.425 800.0 191840.0 25 0 14738.0 + 17440 KNHEEEMKDL 10 196 424.8677486196167 1271.5814164590502 3 424.8679687380791 MULTI CID FTMS 0 0 0 7113 163157.703125 0.8590603944024512 -2 0.0178985595703125 4 Unmodified _KNHEEEMKDL_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 67.83816525789305 0.0190062514522628 3 EE[HN]EKMDK{I|L} 10 6 + 44.516 0.0 0.0 3.5008 3.5008 74.429 0.0 0.0 0.0 3.9904371307691378 9.457640437841874 3.9904371307691378 3.9904371307691378 0 1.024227503252014 0.8239087409443188 0.9674165578762486 0.9247425010840048 EE[HN]EKMDK{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}CEKMDK{I|L};[HN]KEEEMDK{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}ECKMDK{I|L};{NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]CKMDK{I|L};[HN]EEEKMDK{I|L};EE[HN]EMKDK{I|L};[DP][WH]CKMDK{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[MT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}MDK{I|L};[DP]{[HG]|PP}CEKMDK{I|L} 3.5008;3.187;3.1356;2.9863;2.7464;2.6863;2.4918;2.47;2.4226;2.4015 -;-;-;-;-;-;-;-;-;- 2453 1 1.997 129168.4 0.75 2022 5093 7113 HBL1_DMSO_200M_050219_1,7117 HBL1_DMSO_200M_050219_1,7117,KNHEEEMKDL True True KNHEEEMKDL 37.424835 424.867968738079 1319913.125 7113.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 3.7727552702029543 3.0 True 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 7118 37.439 800.0 157540.0 25 0 15165.0 36251 SYEFKHSR 8 166 527.2602519241204 1052.5059509150408 2 527.2592040896416 MULTI CID FTMS 0 0 0 7113 128839.1328125 0.3829839644450323 9 -0.5774002075195312 5 Unmodified _SYEFKHSR_ ENSG00000114480|ENST00000429644|GBE1 12.531546534597751 0.7257836412119636 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}SY 9 7 + 16.747 0.0 0.0 1.5911 1.5911 66.767 0.0 0.0 0.0 0.7024838485436717 3.8664150029014657 0.7024838485436717 0.8843154735291847 0 0.1677353201839438 1.0457574905606752 0.5 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[MT]RQ{M(Oxidation (M))|F}H;[VS][HS]V{I|L}Q{M(Oxidation (M))|F}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[VG][SG]{I|L}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}Q{I|L}Q{M(Oxidation (M))|F}H;[VS][HS]V[SG]P{M(Oxidation (M))|F}H;{[QG]|[NA]}[QP]V{I|L}Q{M(Oxidation (M))|F}H;[AG]G[QP]V{I|L}Q{M(Oxidation (M))|F}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}Q[VP]P[MT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}Q[RH][MT] 1.5911;1.5071;1.5071;1.4142;1.3127;0.96428;0.94302;0.90845;0.82164;0.77816 -;-;-;-;-;-;-;-;-;- 1052 1 1.997 99617.0 0.7699999809265137 2023 5093 7113 HBL1_DMSO_200M_050219_1,7118 HBL1_DMSO_200M_050219_1,7118,SYEFKHSR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7120 37.444 186.0 466910.0 25 0 70882.0 + 3856 DAKLDKSQI 9 114 509.2821408722221 1016.5497288112442 2 509.2823364138603 MULTI CID FTMS 0 0 0 7119 414197.15625 0.096213692554491 10 -0.6680641174316406 1 Unmodified _DAKLDKSQI_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000425843.1_1_X:120337800-120338163:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 74.7717668357584 0.0192543659592842 3 DAK{I|L}DKSQ{I|L} 9 0 + 87.704 0.0 0.0 8.6276 8.6276 87.517 0.0 0.0 0.0 28.78169516824309 3.222192947339196 3.222192947339196 3.222192947339196 0 2.4802046884880937 1.5228787452803376 0.3807196863200844 0.8494850021680094 + + DAK{I|L}DKSQ{I|L};DAK{I|L}DKS{I|L}Q;DAK{I|L}DKS[AG]{I|L};DAK{I|L}DK[QT]V;DAK{I|L}DKSAAV;DAK{I|L}DKAASV;{I|L}[NS]{I|L}DKSQ{I|L};{I|L}[NS]{I|L}DKS{I|L}Q;{I|L}[NS]{I|L}DKS[AG]{I|L};{I|L}[NS]{I|L}DK[QT]V 8.6276;8.3107;6.8862;6.6056;6.4168;5.6947;4.9105;4.5935;3.169;2.8884 +;-;-;-;-;-;-;-;-;- + 792 + 1 1.997 73695.5 1.0 2024 5094 7119 HBL1_DMSO_200M_050219_1,7120 HBL1_DMSO_200M_050219_1,7120,DAKLDKSQI True True DAKLDKSQI 37.444314 509.28233641386 63610614.0 7119.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;;ENST00000425843.1_1_X:120337800-120338163:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 6.404133478800456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7121 37.458 800.0 152990.0 25 0 5393.5 + 24071 LYDSQCGSPFA 11 141 594.2571294004479 1186.4997058676956 2 594.2572509646416 MULTI CID FTMS 0 0 0 7119 206380.484375 0.3163841481765231 6 -0.3132133483886719 2 Unmodified _LYDSQCGSPFA_ REV__ENST00000522969.1_1_8:1808097-1817553:+|nuORF 13.042465956692816 0.7638483625850725 3 {[QG]|[NA]}G[HS]NQQ 8 -1 36.727 0.0 0.0 3.0954 0.0 0.0 0.0 347.13513459404686 347.13513459404686 8.023306858447931 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.0501648626366045 1.416386562212267 {[QG]|[NA]}G[HS]NQQ 3.0954 - 2024 1 1.997 94969.2 0.9800000190734864 2025 5094 7119 HBL1_DMSO_200M_050219_1,7121 HBL1_DMSO_200M_050219_1,7121,LYDSQCGSPFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7122 37.46 112.0 625700.0 25 0 127790.0 -1 0 79 394.1853920547874 393.1781155881874 1 394.1841918826103 MULTI CID FTMS 0 0 0 7119 323129.71875 0.1618730555557121 15 -0.9990158081054688 3 3 {M(Oxidation (M))|F} 1 -1 11.99 0.0 0.0 3.0494 0.0 0.0 228.0992561905296 0.0 228.0992561905296 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 3.0494 - 15 + 1 1.997 60183.4 1.0 2026 5094 7119 HBL1_DMSO_200M_050219_1,7122 HBL1_DMSO_200M_050219_1,7122, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7123 37.464 173.0 473500.0 25 0 98285.0 + 6665 EAYLGKKV 8 103 454.26483706636657 906.5151211995332 2 454.2634155154228 MULTI CID FTMS 0 0 0 7119 247387.53125 0.2516568423955831 -3 0.0640907287597656 4 Unmodified _EAYLGKKV_ ENSG00000044574|ENST00000324460|HSPA5 42.09456458481378 0.1992492688217789 3 [DP]A 3 8 28.939 0.0 0.0 3.1923 0.0 0.0 0.0 620.3753256275206 620.3753256275206 1.673385104275642 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3252574989159953 0.0 [DP]A 3.1923 - 175 1 1.997 67166.1 1.0 2027 5094 7119 HBL1_DMSO_200M_050219_1,7123 HBL1_DMSO_200M_050219_1,7123,EAYLGKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7124 37.471 380.0 439110.0 25 0 41285.0 -1 0 158 382.6858329786735 0 382.6859008669853 PEAK CID FTMS 0 0 0 7119 198920.109375 0.6647062939071094 -6 0.1742515563964843 5 3 P{M(Oxidation (M))|F}A 3 -1 7.4827 0.0 0.0 0.98024 0.0 0.0 276.0775501702927 169.09859644107658 445.1761466113693 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 P{M(Oxidation (M))|F}A 0.98024 - 45 + 1 1.997 134338.3 1.0 2028 5094 7119 HBL1_DMSO_200M_050219_1,7124 HBL1_DMSO_200M_050219_1,7124, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7125 37.475 207.0 554760.0 25 0 171890.0 26772 PAGATQQPAV 10 103 470.2501899685829 938.4858270039656 2 470.2588683962822 MULTI CID FTMS 0 0 0 7119 250048.34375 0.4456845136973589 6 -0.3132133483886719 6 Unmodified _PAGATQQPAV_ ENSG00000166454|ENST00000299575|ATMIN 10.073929032068715 0.6785112666868882 3 {I|L}A[NP] 4 8 12.167 0.0 0.0 1.2964 0.0 0.0 525.2596439979095 0.0 525.2596439979095 0.0 -0.5268117307173164 -0.5268117307173164 0.0 0 0.5 0.0 0.0 0.0 {I|L}A[NP] 1.2964 - 208 + 1 1.997 97546.1 1.0 2029 5094 7119 HBL1_DMSO_200M_050219_1,7125 HBL1_DMSO_200M_050219_1,7125,PAGATQQPAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7126 37.488 800.0 186310.0 25 0 25051.0 + 11191 GEMQGGPNRCY 11 149 606.2523152602756 1210.4900775873512 2 606.2525512576103 MULTI CID FTMS 0 0 0 7119 94512.4453125 0.6043670862741309 -1 0.0461921691894531 7 Unmodified _GEMQGGPNRCY_ REV__ENSG00000169071|ENST00000375708|ROR2 34.93206674587334 0.2904649469012649 3 {[DA]|[EG]}MQG{M(Oxidation (M))|F}VQ[C(Carbamidomethyl (C))R] 10 -1 + 62.563 0.0 0.0 5.1684 5.1684 75.04 0.0 0.0 0.0 1.2691846597185474 1.2691846597185474 1.2691846597185474 1.2691846597185474 0 1.7887254899964358 1.5228787452803376 0.2614393726401688 0.0 {[DA]|[EG]}MQG{M(Oxidation (M))|F}VQ[C(Carbamidomethyl (C))R];{[DA]|[EG]}MQVWW[{M(Oxidation (M))|F}E];{[DA]|[EG]}MQ[YK]ED[DP];{[DA]|[EG]}MQV{NN|[MP]|[D{I|L}]|[EV]}[SG][{M(Oxidation (M))|F}E];{[DA]|[EG]}MQ[R{M(Oxidation (M))|F}]Q[C(Carbamidomethyl (C))R];{[DA]|[EG]}MQG{M(Oxidation (M))|F}V[AG][C(Carbamidomethyl (C))R];{[DA]|[EG]}M[AG]G{M(Oxidation (M))|F}VQ[C(Carbamidomethyl (C))R];{[DA]|[EG]}M[AG][YK]ED[DP];{[DA]|[EG]}M[AG]VWW[{M(Oxidation (M))|F}E];{[DA]|[EG]}MQ[R{M(Oxidation (M))|F}][AG][C(Carbamidomethyl (C))R] 5.1684;5.0636;4.7866;4.661;4.6141;4.4113;4.4113;4.0295;3.952;3.8534 -;-;-;-;-;-;-;-;-;- 597 1 1.997 109056.5 0.6800000071525574 2030 5094 7119 HBL1_DMSO_200M_050219_1,7126 HBL1_DMSO_200M_050219_1,7126,GEMQGGPNRCY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7128 37.493 111.0 530750.0 25 0 95242.0 34649 SPPPPPPPP 9 83 441.73979431227787 881.4650356913558 2 442.2412292361259 MULTI CID FTMS 0 0 0 7127 335849.0625 0.586778063375833 6 -0.385040283203125 1 Unmodified _SPPPPPPPP_ ENSG00000099999|ENST00000382363|RNF215;ENSG00000100312|ENST00000216139|ACR;ENSG00000103479|ENST00000262133|RBL2;ENSG00000107816|ENST00000454422|LZTS2;ENSG00000109920|ENST00000263773|FNBP4;ENSG00000120549|ENST00000376454|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;ENSG00000136754|ENST00000376140|ABI1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000164944|ENST00000297591|VIRMA;ENSG00000184863|ENST00000401878|RBM33;ENSG00000260428|ENST00000567180|SCX;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;nc|ENSG00000109920|Q8N3X1-2|FNBP4;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000015285|ENST00000376701|WAS;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000100201|ENST00000403230|DDX17;REV__ENSG00000107816|ENST00000454422|LZTS2;REV__ENSG00000112541|ENST00000539869|PDE10A;REV__ENSG00000127666|ENST00000248244|TICAM1;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENSG00000141867|ENST00000679869|BRD4;REV__ENSG00000143006|ENST00000371445|DMRTB1;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000204334|ENST00000697325|ERICH2;REV__ENSG00000242265|ENST00000612748|PEG10;REV__ENST00000216019.11_1_22:38881942-38884127:-|nuORF;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF;REV__ENST00000361272.8_2_8:17102747-17104366:-|nuORF;REV__ENST00000431312.2_1_22:38881942-38884127:-|nuORF;REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF;REV__ENST00000482108.1_2_7:94293788-94294991:+|nuORF;REV__ENST00000508096.1_1_10:126605730-126631034:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100201|Q92841-1|DDX17;REV__nc|ENSG00000100201|Q92841-2|DDX17;REV__nc|ENSG00000100201|Q92841-3|DDX17;REV__nc|ENSG00000139218|Q99590-2|SCAF11;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000168066|Q15637-5|SF1;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 81.86404211737425 0.017065112157077 3 [PS]PPPP[YK] 8 3 + 67.189 0.0 0.0 7.6225 7.6225 95.444 0.0 0.0 0.0 17.659167939666318 54.97093142085326 17.659167939666318 21.86181873724173 0 1.305462187404089 1.6989700043360187 1.2530834337684311 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[PS][YK]P[YK];[YK]SPP[YK];{[HG]|PP}PSPP[YK];[PS]P[YK][YK];[YK]PSP[YK];{[HG]|PP}PPSP[YK];{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[YK];{[NV]|[RG]}[YV]P[YK] 7.6225;5.1423;4.8788;4.866;4.7104;3.8493;3.8429;3.6872;2.869;1.82 -;-;-;-;-;-;-;-;-;- 165 1 1.997 51539.0 1.0 2031 5095 7127 HBL1_DMSO_200M_050219_1,7128 HBL1_DMSO_200M_050219_1,7128,SPPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7129 37.507 800.0 26577.0 25 0 1713.9 -1 0 52 948.0703821418094 2841.189317025628 3 948.739794909954 MULTI CID FTMS 0 0 0 7127 51503.9140625 0.5926981043103553 1 -0.0653648376464843 2 3 M 1 -1 5.4846 0.0 0.0 0.19304 0.0 0.0 1893.699523179728 813.4165743463499 2707.1160975260777 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.19304 - 15 + 1 1.997 22711.3 0.550000011920929 2032 5095 7127 HBL1_DMSO_200M_050219_1,7129 HBL1_DMSO_200M_050219_1,7129, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7130 37.512 309.0 312120.0 25 0 47026.0 + -1 TVRMEKEV 8 118 504.2642211781306 0 504.2640563845634 PEAK CID FTMS 0 0 0 7127 166987.5 0.4360113593377875 -16 0.636627197265625 3 Oxidation (M) _TVRM(Oxidation (M))EKEV_ REV__ENSG00000197102|ENST00000360184|DYNC1H1 6.723162845929126 0.5749384031518959 3 M 1 -1 3.9794 0.0 0.0 0.39536 0.0 0.0 742.4023914755987 130.05129419498283 872.4536856705815 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.39536 + + 10 + 1 1.997 82297.7 1.0 2033 5095 7127 HBL1_DMSO_200M_050219_1,7130 HBL1_DMSO_200M_050219_1,7130,TVRMEKEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7131 37.526 800.0 106330.0 25 0 7844.3 + 7252 EESNYELEGK 10 131 599.2667989770152 1196.5190450208304 2 599.2668945193291 MULTI CID FTMS 0 0 0 7127 105605.4140625 0.2796687354957005 -3 0.1040725708007812 4 Unmodified _EESNYELEGK_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 42.312485326615175 0.1331477410672653 3 EESNYE{I|L}EGK 10 0 + 80.883 0.0 0.0 6.7599 6.7599 89.48 0.0 0.0 0.0 68.15066309788013 12.791185002722427 12.791185002722427 9.164539485499247 0 0.3494850021680094 1.6989700043360187 0.5 1.048455006504028 + + EESNYE{I|L}EGK;EESGGYE{I|L}EGK;EESNYE{I|L}{[NV]|[RG]}T;EESGGYE{I|L}{[NV]|[RG]}T;EESNY[RV]PCT;EESGGY[RV]PCT;{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HT]NS[HC] 6.7599;5.9939;5.2567;4.4908;3.7087;2.9428;1.2172 +;-;-;-;-;-;- + 418 + 1 1.997 66788.0 0.7400000095367432 2034 5095 7127 HBL1_DMSO_200M_050219_1,7131 HBL1_DMSO_200M_050219_1,7131,EESNYELEGK False True EESNYELEGK 37.526176 599.266894519329 4043892.75 7127.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 8.18262767791748 2.0 True 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 7132 37.54 800.0 217470.0 25 0 11301.0 + 15433 IPPQNASQV 9 182 477.2556135901895 952.4966742471788 2 477.2559387087822 MULTI CID FTMS 0 0 0 7127 100083.1875 0.5266100565511951 -4 0.1138801574707031 5 Unmodified _IPPQNASQV_ ENSG00000171016|ENST00000563719|PYGO1;nc|ENSG00000171016|Q9Y3Y4|PYGO1 21.74664581756881 0.2544899275067181 3 M 1 9 13.495 0.0 0.0 1.4168 0.0 0.0 803.4452348934665 0.0 803.4452348934665 0.0 0.1991783829530646 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.4168 - 699 + 1 1.997 131236.9 0.699999988079071 2035 5095 7127 HBL1_DMSO_200M_050219_1,7132 HBL1_DMSO_200M_050219_1,7132,IPPQNASQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7133 37.554 800.0 361430.0 25 0 32971.0 + 7413 EGLGSARGGQL 11 219 522.7750736687035 1043.535594404207 2 522.7748290896416 MULTI CID FTMS 0 0 0 7127 80035.265625 0.0060391576691426 -5 0.1464881896972656 6 Unmodified _EGLGSARGGQL_ REV__ENSG00000165458|ENST00000298229|INPPL1;REV__nc|ENSG00000165458|O15357-2|INPPL1 117.83759599426816 0.0338141295894295 3 {[DA]|[EG]}{I|L}RQSGGQ{I|L} 10 -1 + 104.16 0.0 0.0 9.9818 9.9818 93.162 0.0 0.0 0.0 23.686012926150823 16.53212513775344 16.53212513775344 7.702789364562065 0 1.4049471895720984 2.0 0.909097005026964 1.066901560044258 {[DA]|[EG]}{I|L}RQSGGQ{I|L};{[DA]|[EG]}{I|L}RQSNQ{I|L};{[DA]|[EG]}{I|L}R[AG]SGGQ{I|L};{[DA]|[EG]}{I|L}RQSGG[AG]{I|L};{[DA]|[EG]}{I|L}G{[QV]|[N{I|L}]|[RA]|[KV]}SGGQ{I|L};{[DA]|[EG]}{I|L}R[AG]SNQ{I|L};{[DA]|[EG]}{I|L}RQSN[AG]{I|L};{[DA]|[EG]}{I|L}W[KG]GGQ{I|L};{[DA]|[EG]}{I|L}G[WK]GGQ{I|L};{[DA]|[EG]}{I|L}R[AG]SGG[AG]{I|L} 9.9818;9.2437;9.1036;9.1036;8.875;8.3613;8.3613;8.279;8.2449;8.2289 -;-;-;-;-;-;-;-;-;- 20457 1 1.997 218305.5 0.7099999785423279 2036 5095 7127 HBL1_DMSO_200M_050219_1,7133 HBL1_DMSO_200M_050219_1,7133,EGLGSARGGQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7135 37.558 4.9 6108800.0 25 0 322030.0 + -1 CLCFAPCIAF 10 59 629.7757750052342 1257.5369970772683 2 629.7760497927666 MULTI CID FTMS 0 0 0 7134 12466024.0 0.9633397609954482 -1 0.0653648376464843 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 18.13498045792455 0.5432546531930572 3 [QA]HDEAQQNA{M(Oxidation (M))|F} 11 -1 + 70.821 0.0 0.0 5.6317 5.6317 75.821 0.0 0.0 0.0 3.872735630574084 45.2577874811701 3.872735630574084 0.7968969065610167 0 0.8494850021680094 0.0 0.3807196863200844 0.3807196863200844 [QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEAQNQA{M(Oxidation (M))|F};[QA]HDEAQ[AG]NA{M(Oxidation (M))|F};[QA]HDEA[AG]QNA{M(Oxidation (M))|F};[QA]HDEAQQGGA{M(Oxidation (M))|F};[QA]HDEAQGGQA{M(Oxidation (M))|F};[QA]HDEA[AG]NQA{M(Oxidation (M))|F};[QA]HDEAQN[AG]A{M(Oxidation (M))|F};[HD][QA]EAQQNA{M(Oxidation (M))|F};[HD][QA]EAQNQA{M(Oxidation (M))|F} 5.6317;5.5684;4.9058;4.9058;4.9058;4.8425;4.8425;4.8425;4.6194;4.5561 -;-;-;-;-;-;-;-;-;- 682 1 1.99 28868.5 1.0 2037 5096 7134 HBL1_DMSO_200M_050219_1,7135 HBL1_DMSO_200M_050219_1,7135,CLCFAPCIAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7136 37.559 9.3 4899800.0 25 0 396010.0 + + 18759 VARPSSGTTI 10 79 494.7747072701538 987.5348616071076 2 494.7746765017509 MULTI CID FTMS 0 0 0 7134 7081937.5 0.8865587272099067 1 -0.0541534423828125 2 Unmodified _LALYHGTTL_ ENST00000381140.8_3_13:27998935-28001286:+|nuORF;ENST00000466776.5_1_13:27998904-28001286:+|nuORF 38.15118350030904 0.0856056900103839 3 GTT{I|L} 4 -1 47.423 0.0 0.0 4.8021 0.0 0.0 597.3243885724625 0.0 597.3243885724625 0.0 35.753800256993955 0.0 0.0 0 0.9247425010840048 0.0 0.9247425010840048 0.0 GTT{I|L} 4.8021 + + 111 1 1.99 41475.3 1.0 2038 5096 7134 HBL1_DMSO_200M_050219_1,7136 HBL1_DMSO_200M_050219_1,7136,LALYHGTTL False False VARPSSGTTI 37.559313 494.774676501751 99385008.0 7134.0 ENST00000381140.8_3_13:27998935-28001286:+|nuORF;;ENST00000466776.5_1_13:27998904-28001286:+|nuORF 5.400341192881267 2.0 False 10.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7137 37.56 13.0 3698000.0 25 0 395280.0 -1 DAEMTTRMV 9 67 535.2362804984871 1068.458008063774 2 535.2362548708916 MULTI CID FTMS 0 0 0 7134 4818600.5 0.963774456879368 1 -0.0541534423828125 3 Oxidation (M) _DAEMTTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 24.99096001346401 0.2132109383330889 3 {[DA]|[EG]}EMTT 6 -1 50.891 0.0 0.0 4.763 0.0 0.0 0.0 417.19187341861567 417.19187341861567 10.779550148593486 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}EMTT 4.763 + + 112 + 1 1.99 40350.7 1.0 2039 5096 7134 HBL1_DMSO_200M_050219_1,7137 HBL1_DMSO_200M_050219_1,7137,DAEMTTRMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7138 37.562 19.0 2230000.0 25 0 156510.0 + 5947 DQHSAVDCGF 10 78 539.7177785547001 1077.4210041762 2 539.7181274294853 MULTI CID FTMS 0 0 0 7134 3135824.25 0.8299156500666736 2 -0.1122016906738281 4 Unmodified _DQHSAVDCGF_ REV__ENST00000421413.6_1_6:133646543-133785920:+|nuORF 13.042465956692816 0.6287021003332052 3 SQVC(Carbamidomethyl (C)){[{M(Oxidation (M))|F}D]|MM} 6 -1 38.887 0.0 0.0 3.6093 0.0 0.0 323.1232777326188 0.0 323.1232777326188 0.0 18.18636235841012 0.0 0.0 0 0.3252574989159953 0.0 1.1989700043360187 0.0 SQVC(Carbamidomethyl (C)){[{M(Oxidation (M))|F}D]|MM} 3.6093 - 187 1 1.99 40099.5 1.0 2040 5096 7134 HBL1_DMSO_200M_050219_1,7138 HBL1_DMSO_200M_050219_1,7138,DQHSAVDCGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7139 37.563 42.0 803640.0 25 0 90427.0 12333 GSRSPLPSV 9 62 450.25060526427393 898.4866575953479 2 450.2506286501884 MULTI CID FTMS 0 0 0 7134 1109533.25 0.4795296255718419 -2 0.1151542663574218 5 Unmodified _GSRSPLPSV_ ENST00000371442.3_1_X:119005639-119005735:-|nuORF 22.736283301280096 0.2418982879461534 3 PDV 3 7 25.177 0.0 0.0 2.8022 0.0 0.0 569.3296375959 0.0 569.3296375959 0.0 6.532125137753436 0.0 0.0 0 0.0 0.0 0.5 0.0 PDV 2.8022 - 90 1 1.99 32757.8 1.0 2041 5096 7134 HBL1_DMSO_200M_050219_1,7139 HBL1_DMSO_200M_050219_1,7139,GSRSPLPSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7140 37.566 184.0 570980.0 25 0 125260.0 -1 0 61 952.9516489946288 1903.8887450560576 2 952.9513427615166 MULTI CID FTMS 0 0 0 7134 561704.8125 0.159457834523248 9 -0.5653800964355469 6 3 VTQV 4 -1 16.146 0.0 0.0 0.84807 0.0 0.0 1117.4277598039075 356.1930330865844 1473.620792890492 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 VTQV 0.84807 - 54 + 1 1.99 78891.5 1.0 2042 5096 7134 HBL1_DMSO_200M_050219_1,7140 HBL1_DMSO_200M_050219_1,7140, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7141 37.58 800.0 65439.0 25 0 14799.0 -1 0 41 1076.0975255688522 3225.2707473067567 3 1076.098315417767 MULTI CID FTMS 0 0 0 7134 140767.1875 0.9195530178845922 2 -0.1122016906738281 7 3 E 1 -1 5.4846 0.0 0.0 0.17005 0.0 0.0 2569.0410852967943 524.1628512018186 3093.203936498613 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.17005 - 15 + 1 1.99 52574.4 0.5799999833106995 2043 5096 7134 HBL1_DMSO_200M_050219_1,7141 HBL1_DMSO_200M_050219_1,7141, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7142 37.594 800.0 121540.0 25 0 9745.1 + 26933 PDSYKHHTNTL 11 132 656.8178399277646 1311.621126922329 2 656.8171874880791 MULTI CID FTMS 0 0 0 7134 128719.4609375 0.9283474244980944 -1 0.0653648376464843 8 Unmodified _PDSYKHHTNTL_ REV__ENSG00000163214|ENST00000457308|DHX57;REV__ENST00000479345.2_1_2:39084268-39090579:-|nuORF;REV__nc|ENSG00000163214|Q6P158-2|DHX57;REV__nc|ENSG00000163214|Q6P158-3|DHX57 7.101721422024254 0.8416415510090076 3 [DP]VQ{I|L}S[{I|L}P]SE 10 -1 32.713 0.0 0.0 2.4941 0.0 0.0 0.0 243.06837909175889 243.06837909175889 21.60351040942807 0.0 0.0 0.0 0 0.1861818737241735 1.3010299956639813 0.3807196863200844 0.0 [DP]VQ{I|L}S[{I|L}P]SE 2.4941 - 517 1 1.99 75197.1 0.7900000214576721 2044 5096 7134 HBL1_DMSO_200M_050219_1,7142 HBL1_DMSO_200M_050219_1,7142,PDSYKHHTNTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7143 37.608 800.0 30257.0 25 0 8885.0 -1 0 47 1030.243062556994 6175.414716542364 6 1030.410693347454 MULTI CID FTMS 0 0 0 7134 128851.46875 0.9361654254836071 -1 0.0653648376464843 9 3 A 1 -1 5.4846 0.0 0.0 0.088813 0.0 0.0 5074.908321133964 1026.4610383395948 6101.369359473559 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.088813 - 8 + 1 1.99 35423.8 0.5899999737739563 2045 5096 7134 HBL1_DMSO_200M_050219_1,7143 HBL1_DMSO_200M_050219_1,7143, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7145 37.612 89.0 676500.0 25 0 80480.0 + 28133 PPPPATTGPP 10 103 466.2462268697885 930.4779008063772 2 466.7488586306572 MULTI CID FTMS 0 0 0 7144 674671.5625 0.1568260898065369 26 -2.096630096435547 1 Unmodified _PPPPATTGPP_ REV__ENSG00000174938|ENST00000617533|SEZ6L2;REV__nc|ENSG00000174938|Q6UXD5-5|SEZ6L2;REV__nc|ENSG00000174938|Q6UXD5-6|SEZ6L2;REV__nc|ENSG00000174938|Q6UXD5|SEZ6L2 23.1484247019978 0.4485954791219598 3 PPPPPA{M(Oxidation (M))|F} 7 -1 37.924 0.0 0.0 4.0758 0.0 0.0 209.13190578860207 0.0 209.13190578860207 0.0 6.831757371527868 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPPPA{M(Oxidation (M))|F} 4.0758 - 459 + 1 1.99 51686.8 1.0 2046 5097 7144 HBL1_DMSO_200M_050219_1,7145 HBL1_DMSO_200M_050219_1,7145,PPPPATTGPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7146 37.615 153.0 423090.0 25 0 45725.0 + 17670 KPTGARPSAL 10 86 499.29290132073936 996.5712497082789 2 499.2926513552666 MULTI CID FTMS 0 0 0 7144 320104.9375 0.334451135337519 8 -0.5112266540527344 2 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 18.373094154950223 0.5392593366289069 3 KPT 3 7 35.445 0.0 0.0 3.5567 0.0 0.0 0.0 667.355251960392 667.355251960392 20.89838375838223 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + KPT 3.5567 + + 87 + 1 1.99 53114.1 1.0 2047 5097 7144 HBL1_DMSO_200M_050219_1,7146 HBL1_DMSO_200M_050219_1,7146,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7147 37.617 52.0 1483000.0 25 0 155140.0 + 6668 EAYLGKKV 8 95 303.1797760818672 906.5174988458016 3 303.1794921755791 MULTI CID FTMS 0 0 0 7144 687248.25 1.0 0 0.0 3 Unmodified _EAYLGKKV_ ENSG00000044574|ENST00000324460|HSPA5 12.531546534597751 0.7257836412119636 3 {[CP]|[EA]}Y{I|L}KG{[QV]|[N{I|L}]|[RA]|[KV]} 8 2 + 24.442 0.0 0.0 2.6963 2.6963 80.514 0.0 0.0 0.0 16.967809330011434 2.307131330965717 2.307131330965717 14.776296993281404 0 0.0 0.0 0.0 0.3807196863200844 {[CP]|[EA]}Y{I|L}KG{[QV]|[N{I|L}]|[RA]|[KV]};{[CP]|[EA]}VY[KA]{[QV]|[N{I|L}]|[RA]|[KV]};{[CP]|[EA]}YV[KA]{[QV]|[N{I|L}]|[RA]|[KV]} 2.6963;1.0663;1.0663 -;-;- 74 + 1 1.99 71090.0 1.0 2048 5097 7144 HBL1_DMSO_200M_050219_1,7147 HBL1_DMSO_200M_050219_1,7147,EAYLGKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7148 37.619 91.0 671660.0 25 0 52077.0 12770 GVPMSITLQ 9 95 473.2589306064832 0 473.2597839236259 PEAK CID FTMS 0 0 0 7144 551914.0625 0.8320099532628169 1 -0.0580482482910156 4 Unmodified _GVPMSITLQ_ ENST00000412095.1_1_6:32812086-32812371:+|nuORF 4.3292370932331545 0.3444685223463734 3 A 1 9 2.4743 0.0 0.0 0.26196 0.0 0.0 472.3550254606927 398.0939119928344 870.4489374535272 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.26196 - 1 + 1 1.99 52885.4 1.0 2049 5097 7144 HBL1_DMSO_200M_050219_1,7148 HBL1_DMSO_200M_050219_1,7148,GVPMSITLQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7149 37.621 112.0 775790.0 25 0 100690.0 + 14242 IDWNTETSL 9 114 360.172036741898 1077.494280825894 3 360.1720153689384 MULTI CID FTMS 0 0 0 7144 346987.75 0.1519538805880604 -3 0.1693077087402343 5 Unmodified _IDWNTETSL_ REV__ENSG00000159377|ENST00000290541|PSMB4;REV__ENST00000474100.1_1_1:151373984-151374302:+|nuORF;REV__ENST00000476467.1_1_1:151373984-151374107:+|nuORF;REV__ENST00000493673.1_1_1:151373717-151374107:+|nuORF 15.847184025352805 0.4077185912009129 3 {I|L}PVS 4 -1 41.74 0.0 0.0 3.8738 0.0 0.0 0.0 678.2318209283811 678.2318209283811 22.85428304514684 0.0 0.0 0.0 0 0.2059771852360797 0.6989700043360187 0.4247425010840047 0.0 {I|L}PVS 3.8738 - 108 + 1 1.99 81797.3 1.0 2050 5097 7144 HBL1_DMSO_200M_050219_1,7149 HBL1_DMSO_200M_050219_1,7149,IDWNTETSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7150 37.624 182.0 747030.0 25 0 94940.0 40037 VGFWAISHIL 10 125 381.5513943874578 1141.6323537625735 3 381.5508605837822 MULTI CID FTMS 0 0 0 7144 296141.03125 1.0 0 0.0 6 Unmodified _VGFWAISHIL_ ENST00000444760.5_2_3:47554799-47554862:-|nuORF 6.630372943996041 0.695967137280542 3 VD[KP]PKP 7 9 29.583 0.0 0.0 2.5913 0.0 0.0 0.0 377.16697107486567 377.16697107486567 15.352413214615108 0.0 0.0 0.0 0 0.1747425010840047 0.0 0.0 0.0 VD[KP]PKP 2.5913 - 159 + 1 1.99 112695.2 1.0 2051 5097 7144 HBL1_DMSO_200M_050219_1,7150 HBL1_DMSO_200M_050219_1,7150,VGFWAISHIL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7151 37.638 800.0 323370.0 25 0 83792.0 -1 0 179 490.2871869096935 489.2799104430935 1 492.2998229861259 MULTI CID FTMS 0 0 0 7144 156144.640625 0.6748914683837045 -11 0.4314765930175781 7 3 {M(Oxidation (M))|F} 1 -1 11.259 0.0 0.0 2.3011 0.0 0.0 324.20062379934194 0.0 324.20062379934194 0.0 1.3442265614629 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.3011 - 115 + 1 1.99 198087.7 0.8600000143051147 2052 5097 7144 HBL1_DMSO_200M_050219_1,7151 HBL1_DMSO_200M_050219_1,7151, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7152 37.652 800.0 112180.0 25 0 3086.0 + -1 NQCEDIDGCTK 11 132 641.7538501666755 1281.493147400151 2 641.7516967654228 MULTI CID FTMS 0 0 0 7144 138174.5625 1.0 0 0.0 8 Carbamidomethyl (C) _NQC(Carbamidomethyl (C))EDIDGCTK_ REV__ENSG00000147852|ENST00000382100|VLDLR;REV__nc|ENSG00000147852|P98155-2|VLDLR 14.40537977576856 0.7354982482299568 3 EAQQNA{M(Oxidation (M))|F} 7 -1 66.006 0.0 0.0 5.1507 0.0 0.0 475.1400769605842 0.0 475.1400769605842 0.0 36.70567608802613 0.0 0.0 0 0.3807196863200844 0.0 1.048455006504028 0.4247425010840047 EAQQNA{M(Oxidation (M))|F} 5.1507 - 2492 1 1.99 67922.8 0.8500000238418579 2053 5097 7144 HBL1_DMSO_200M_050219_1,7152 HBL1_DMSO_200M_050219_1,7152,NQCEDIDGCTK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7153 37.666 800.0 170690.0 25 0 10659.0 -1 RCCCCCCCSD 10 135 606.6468404389367 0 606.6472656130791 PEAK CID FTMS 0 0 0 7144 101693.859375 1.0 0 0.0 9 2 Carbamidomethyl (C) _RC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCCCCSD_ ENST00000531526.5_1_11:45944386-45945084:+|nuORF 0.0 0.3961065659209837 3 MQV 3 -1 18.94 0.0 0.0 1.5636 0.0 0.0 186.8555965291017 663.2341102504525 850.0897067795543 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 MQV 1.5636 - 268 + 1 1.99 104515.9 0.7900000214576721 2054 5097 7144 HBL1_DMSO_200M_050219_1,7153 HBL1_DMSO_200M_050219_1,7153,RCCCCCCCSD False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7155 37.67 14.0 4215100.0 25 0 665550.0 + 43121 VYPERSTSY 9 53 551.2639447778929 1100.5133366225857 2 551.2641479372978 MULTI CID FTMS 0 0 0 7154 4452963.0 1.0 0 0.0 1 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 24.020572477871973 0.2255576514309169 3 [YV]PE 4 5 43.188 0.0 0.0 3.9243 0.0 0.0 0.0 609.2647282535214 609.2647282535214 27.614393726401687 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + [YV]PE 3.9243 + + 27 + 1 1.989 50674.9 1.0 2055 5098 7154 HBL1_DMSO_200M_050219_1,7155 HBL1_DMSO_200M_050219_1,7155,VYPERSTSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7156 37.672 41.0 1491400.0 25 0 165010.0 + 33248 SFPASSGVSH 10 68 488.2303025289275 974.446052124655 2 488.2302429080009 MULTI CID FTMS 0 0 0 7154 1268096.875 0.875181283869814 10 -0.6765556335449219 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 49.93300154707207 0.0805441195901191 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 70.323 0.0 0.0 7.2167 7.2167 83.511 0.0 0.0 0.0 32.69795311511906 15.026975159433531 15.026975159433531 2.552725051033065 0 0.3807196863200844 2.0 1.110924374808178 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC{[QV]|[N{I|L}]|[RA]|[KV]}SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;[PA]{[ET]|[MV]}SSAN[QA];{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}CAPDT;[PA]S[{I|L}T]CAN[QA];[PA]S{[ET]|[MV]}SAN[QA];[PA]{[ET]|[MV]}SSAGG[QA];[PA]S[{I|L}T]CAGG[QA] 7.2167;6.9547;5.4588;4.8611;3.8361;3.7139;3.6267;3.2183;2.8956;2.6862 +;-;-;-;-;-;-;-;-;- + 281 + 1 1.989 53369.4 1.0 2056 5098 7154 HBL1_DMSO_200M_050219_1,7156 HBL1_DMSO_200M_050219_1,7156,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7157 37.673 24.0 2182300.0 25 0 219810.0 -1 PLVGCEFWA 9 55 539.7543191374821 1077.494085341764 2 539.7545043826103 MULTI CID FTMS 0 0 0 7154 1886348.0 0.5814885997549475 -1 0.0580482482910156 3 Carbamidomethyl (C) _PLVGC(Carbamidomethyl (C))EFWA_ nc|ENSG00000079482|O60890-2|OPHN1 16.942295170755138 0.3780752226737986 3 {I|L}PDDVQS 7 -1 51.445 0.0 0.0 4.7745 0.0 0.0 0.0 320.1005953424438 320.1005953424438 27.00781977329818 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.4247425010840047 0.0 {I|L}PDDVQS 4.7745 - 55 + 1 1.989 50556.7 1.0 2057 5098 7154 HBL1_DMSO_200M_050219_1,7157 HBL1_DMSO_200M_050219_1,7157,PLVGCEFWA False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 7158 37.674 44.0 1362000.0 25 0 244510.0 26801 PAPPPPPPP 9 77 433.7420770129379 865.4696010926758 2 433.7420837283134 MULTI CID FTMS 0 0 0 7154 1123038.375 0.8162157374171798 -1 0.0580482482910156 4 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;ENSG00000103495|ENST00000322945|MAZ;ENSG00000105429|ENST00000251268|MEGF8;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139687|ENST00000267163|RB1;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000158195|ENST00000618852|WASF2;ENSG00000165821|ENST00000537235|SALL2;ENSG00000167771|ENST00000301459|RCOR2;ENSG00000169862|ENST00000304623|CTNND2;ENSG00000171634|ENST00000306378|BPTF;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000182601|ENST00000331351|HS3ST4;ENSG00000184937|ENST00000452863|WT1;ENSG00000196367|ENST00000456197|TRRAP;ENSG00000197483|ENST00000598519|ZNF628;ENSG00000205177|ENST00000379011|C11orf91;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000272333|ENST00000420124|KMT2B;ENST00000263228.3_1_9:33817570-33817774:+|nuORF;ENST00000378204.6_1_8:119123785-119123992:-|nuORF;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;ENST00000592092.1_1_19:36224173-36224410:+|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000103495|P56270-2|MAZ;nc|ENSG00000103495|P56270-3|MAZ;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000169862|Q9UQB3-2|CTNND2;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;nc|nan|Q3C1V1-2|C11orf91;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000060749|ENST00000650167|QSER1;REV__ENSG00000077420|ENST00000376236|APBB1IP;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000108819|ENST00000612501|PPP1R9B;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000112320|ENST00000317357|SOBP;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__ENSG00000126464|ENST00000418929|PRR12;REV__ENSG00000136848|ENST00000408936|DAB2IP;REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000168874|ENST00000306279|ATOH8;REV__ENSG00000171450|ENST00000302625|CDK5R2;REV__ENSG00000176058|ENST00000409012|TPRN;REV__ENSG00000176165|ENST00000313071|FOXG1;REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENSG00000182484|ENST00000359512|WASH6P;REV__ENSG00000188620|ENST00000357878|HMX3;REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENSG00000247746|ENST00000500968|USP51;REV__ENSG00000274588|ENST00000611977|DGKK;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000400706.3_1_12:88275-90926:+|nuORF;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;REV__ENST00000557932.5_1_15:102513813-102516466:+|nuORF;REV__ENST00000602719.5_1_16:85784553-85784670:-|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000168874|Q96SQ7-2|ATOH8;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6;REV__nc|ENSG00000234769|A8MWX3|WASH4P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P;REV__nc|ENSG00000292372|Q9NQA3|WASH6P 56.04830969593885 0.0282699710924866 3 [PA]PPPP[YK] 8 3 + 59.359 0.0 0.0 6.8585 6.8585 93.468 0.0 0.0 0.0 22.21848749616356 6.989700043360188 6.989700043360188 21.62630571450393 0 1.3494850021680094 2.0 0.0 0.0 [PA]PPPP[YK];[PA][YK]P[YK];{[HG]|PP}APPP[YK];[YK]APP[YK];{[HG]|PP}PAPP[YK];[PA]P[YK][YK];[YK]PAP[YK];{[HG]|PP}PPAP[YK];{[NV]|[RG]}[{M(Oxidation (M))|F}V]P[YK];{[HG]|PP}A[YK][YK] 6.8585;4.3597;4.2913;4.0105;3.9435;3.3177;2.8241;2.7571;1.4976;0.75047 -;-;-;-;-;-;-;-;-;- 119 1 1.989 55428.5 1.0 2058 5098 7154 HBL1_DMSO_200M_050219_1,7158 HBL1_DMSO_200M_050219_1,7158,PAPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7159 37.676 70.0 671960.0 25 0 49556.0 + 5879 DPYKHKVNI 9 74 557.306021857312 1112.597490781424 2 557.3062621951103 MULTI CID FTMS 0 0 0 7154 857626.25 0.5767031757377856 2 -0.0858573913574218 5 Unmodified _DPYKHKVNI_ ENSG00000198793|ENST00000361445|MTOR 56.17704186161178 0.0281986971544335 3 DPYKH 5 4 51.599 0.0 0.0 4.6377 0.0 0.0 0.0 469.2787264459594 469.2787264459594 29.392653074926045 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + DPYKH 4.6377 + + 79 + 1 1.989 43251.2 1.0 2059 5098 7154 HBL1_DMSO_200M_050219_1,7159 HBL1_DMSO_200M_050219_1,7159,DPYKHKVNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7160 37.678 120.0 522370.0 25 0 63325.0 + 6601 EAPSQKVTV 9 87 479.7640130651224 957.5134731970448 2 479.7639037966728 MULTI CID FTMS 0 0 0 7154 644689.5625 0.9801253264144212 -1 0.0580482482910156 6 Unmodified _EAPSQKVTV_ ENSG00000073050|ENST00000262887|XRCC1;ENST00000595789.5_1_19:44056953-44079610:-|nuORF 32.78568957990786 0.1150597335874693 3 [PS]QKVT 6 3 30.767 0.0 0.0 3.2133 0.0 0.0 0.0 314.13564051565737 314.13564051565737 10.692219776465356 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.6989700043360187 0.0 + [PS]QKVT 3.2133 + + 121 1 1.989 52485.3 1.0 2060 5098 7154 HBL1_DMSO_200M_050219_1,7160 HBL1_DMSO_200M_050219_1,7160,EAPSQKVTV True True EAPSQKVTV 37.678048 479.763903796673 3193334.75 7154.0 ENST00000595789.5_1_19:44056953-44079610:-|nuORF;;ENSG00000073050|ENST00000262887|XRCC1 6.265029589335124 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7161 37.681 136.0 540210.0 25 0 96091.0 + 34650 SPPPPPPPP 9 86 441.73979431227787 881.4650356913558 2 441.7395507693291 MULTI CID FTMS 0 0 0 7154 475078.625 0.4376723553504824 10 -0.6765556335449219 7 Unmodified _SPPPPPPPP_ ENSG00000103479|ENST00000262133|RBL2;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENSG00000099999|ENST00000382363|RNF215;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000136754|Q8IZP0-8|ABI1;ENSG00000100312|ENST00000216139|ACR;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;ENSG00000139800|ENST00000267294|ZIC5;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000164944|Q69YN4-4|VIRMA;ENSG00000109920|ENST00000263773|FNBP4;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000260428|ENST00000567180|SCX;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000109920|Q8N3X1-2|FNBP4;ENSG00000274209|ENST00000620264|ANTXRL;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000136754|ENST00000376140|ABI1;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;ENSG00000107816|ENST00000454422|LZTS2;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;ENSG00000184863|ENST00000401878|RBM33;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217;nc|ENSG00000136754|Q8IZP0-12|ABI1 81.86404211737425 0.017065112157077 3 [PS]PPPP[YK] 8 3 + 69.798 0.0 0.0 7.9184 7.9184 96.148 0.0 0.0 0.0 20.66946789630613 58.37829261964417 20.66946789630613 22.21848749616356 0 1.305462187404089 2.0 1.4559771852360797 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[PS][YK]P[YK];[PS]P[YK][YK];{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[YK];{[NV]|[RG]}[YV]P[YK];{[HG]|PP}S[YK][YK] 7.9184;5.3978;5.0815;3.7538;2.6708;1.4785;1.2332 -;-;-;-;-;-;- 173 1 1.989 62081.4 1.0 2061 5098 7154 HBL1_DMSO_200M_050219_1,7161 HBL1_DMSO_200M_050219_1,7161,SPPPPPPPP False False SPPPPPPPP 37.6808 441.739550769329 42558411.0 7154.0 ENSG00000103479|ENST00000262133|RBL2;;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;;ENSG00000099999|ENST00000382363|RNF215;;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;;nc|ENSG00000136754|Q8IZP0-8|ABI1;;ENSG00000100312|ENST00000216139|ACR;;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;;nc|ENSG00000136754|Q8IZP0-7|ABI1;;nc|ENSG00000136754|Q8IZP0-10|ABI1;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000136754|Q8IZP0-11|ABI1;;nc|ENSG00000136754|Q8IZP0-3|ABI1;;ENSG00000139800|ENST00000267294|ZIC5;;nc|ENSG00000136754|Q8IZP0-5|ABI1;;nc|ENSG00000164944|Q69YN4-4|VIRMA;;ENSG00000109920|ENST00000263773|FNBP4;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000260428|ENST00000567180|SCX;;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;;nc|ENSG00000109920|Q8N3X1-2|FNBP4;;ENSG00000274209|ENST00000620264|ANTXRL;;nc|ENSG00000136754|Q8IZP0-4|ABI1;;nc|ENSG00000136754|Q8IZP0-6|ABI1;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA;;ENSG00000136754|ENST00000376140|ABI1;;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;;ENSG00000107816|ENST00000454422|LZTS2;;nc|ENSG00000136754|Q8IZP0-2|ABI1;;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;;ENSG00000184863|ENST00000401878|RBM33;;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;;ENSG00000126461|ENST00000360565|SCAF1;;ENSG00000127666|ENST00000248244|TICAM1;;nc|ENSG00000136754|Q8IZP0|ABI1;;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;;ENSG00000120549|ENST00000376454|KIAA1217;;nc|ENSG00000136754|Q8IZP0-12|ABI1 5.868592739105225 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7162 37.684 139.0 547760.0 25 0 55510.0 + 6592 EAPPNTHSI 9 95 483.2375732379608 964.4605935427217 2 483.2379943728447 MULTI CID FTMS 0 0 0 7154 447173.4375 1.0 0 0.0 8 Unmodified _EAPPNTHSI_ ENSG00000163378|ENST00000383701|EOGT;nc|ENSG00000163378|Q5NDL2-2|EOGT;nc|ENSG00000163378|Q5NDL2-3|EOGT 34.40172386719151 0.1061884637610825 3 {[CP]|[EA]}PP{[QS]|[NT]}HS{I|L} 9 0 + 27.263 0.0 0.0 2.8268 2.8268 71.06 0.0 0.0 0.0 7.147642715192507 2.8875030966061423 2.8875030966061423 2.8875030966061423 0 0.2887254899964357 0.0 0.805462187404089 0.0 + + {[CP]|[EA]}PP{[QS]|[NT]}HS{I|L};{[CP]|[EA]}PPKY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[TA]T{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{I|L}{[CP]|[EA]};{[CP]|[EA]}P{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QN]|[E{I|L}]|[KN]}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[PS]S{I|L}{[CP]|[EA]};{[CP]|[EA]}{I|L}W[VS]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SP{[QC]|[C(Carbamidomethyl (C))A]}S{I|L};{[CP]|[EA]}P{[DS]|[MA]|[CV]|TT}[RH][PG];{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}HS{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[WT]|[RM]}S{I|L}{[CP]|[EA]} 2.8268;2.5274;2.1116;1.2294;1.2286;1.1235;0.92462;0.82132;0.70845;0.60797 +;-;-;-;-;-;-;-;-;- + 297 + 1 1.989 61513.2 1.0 2062 5098 7154 HBL1_DMSO_200M_050219_1,7162 HBL1_DMSO_200M_050219_1,7162,EAPPNTHSI True True EAPPNTHSI 37.683589 483.237994372845 6050042.0 7154.0 ENSG00000163378|ENST00000383701|EOGT;;nc|ENSG00000163378|Q5NDL2-3|EOGT;;nc|ENSG00000163378|Q5NDL2-2|EOGT 6.874441782633464 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7163 37.686 119.0 391950.0 25 0 44001.0 + 39160 TYPEESRSY 9 58 566.2509764518932 1130.4873999705862 2 566.2496826052666 MULTI CID FTMS 0 0 0 7154 407156.25 0.0945095144075181 10 -0.6765556335449219 9 Unmodified _TYPEESRSY_ ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13 21.53697664764585 0.2571576504437394 3 [EP]{[RE]|[WV]}EEP[{M(Oxidation (M))|F}V] 9 7 + 46.105 0.0 0.0 4.0783 4.0783 85.527 0.0 0.0 0.0 0.3913622748569167 33.34048994941167 0.3913622748569167 46.10469979270057 0 0.3494850021680094 1.5228787452803376 0.0 0.4247425010840047 [EP]{[RE]|[WV]}EEP[{M(Oxidation (M))|F}V] 4.0783 - 28 1 1.989 42026.3 1.0 2063 5098 7154 HBL1_DMSO_200M_050219_1,7163 HBL1_DMSO_200M_050219_1,7163,TYPEESRSY False True TYPEESRSY 37.686064 566.249682605267 79634694.0 7154.0 ENSG00000123200|ENST00000679008|ZC3H13;;nc|ENSG00000123200|Q5T200|ZC3H13;;nc|ENSG00000123200|Q5T200-2|ZC3H13 7.991128762563069 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7164 37.692 320.0 324260.0 25 0 33630.0 + 39700 VEGGTQHWD 9 133 514.7267081472623 1027.4388633613246 2 514.7269164919853 MULTI CID FTMS 0 0 0 7154 335857.875 1.0 0 0.0 10 Unmodified _VEGGTQHWD_ REV__ENSG00000110172|ENST00000320585|CHORDC1;REV__ENST00000582850.1_1_18:2945806-2945893:-|nuORF;REV__nc|ENSG00000110172|Q9UHD1-2|CHORDC1 26.88365393820708 0.1891292719743517 3 {NN|[MP]|[D{I|L}]|[EV]}G[QT]{[HG]|PP}[WD] 9 -1 + 24.444 0.0 0.0 2.3791 2.3791 69.216 0.0 0.0 0.0 1.9188552623891333 2.683692563431851 1.9188552623891333 1.9188552623891333 0 0.4247425010840047 1.0457574905606752 0.3807196863200844 0.6989700043360187 {NN|[MP]|[D{I|L}]|[EV]}G[QT]{[HG]|PP}[WD];{[DA]|[EG]}V[QT]{[HG]|PP}[WD];{[VA]|[{I|L}G]}D[QT]{[HG]|PP}[WD];{[SA]|[TG]}[QP]NNP[WD];[QP]{[SA]|[TG]}NNP[WD];[WD][VP]NP[WD];{[QS]|[NT]}[PA]NNP[WD];[TA][NP]NNP[WD];{NN|[MP]|[D{I|L}]|[EV]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{M(Oxidation (M))|F}V][WD];{[SA]|[TG]}G[PA]NNP[WD] 2.3791;2.1924;1.9193;1.7958;1.5341;1.5234;1.3966;1.2577;1.2371;1.2098 -;-;-;-;-;-;-;-;-;- 975 1 1.989 86142.0 1.0 2064 5098 7154 HBL1_DMSO_200M_050219_1,7164 HBL1_DMSO_200M_050219_1,7164,VEGGTQHWD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7165 37.694 100.0 783990.0 25 0 82532.0 + 44862 YPPHVQKV 8 110 323.1837477176532 966.5294137531596 3 323.1831542849541 MULTI CID FTMS 0 0 0 7154 318974.90625 0.446542809535209 59 -3.628261566162109 11 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 16.942295170755138 0.6606234159769251 3 YPPH 4 4 40.522 0.0 0.0 4.1925 0.0 0.0 0.0 469.2777804010376 469.2777804010376 29.55259398656281 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 + YPPH 4.1925 + + 137 + 1 1.989 66660.0 1.0 2065 5098 7154 HBL1_DMSO_200M_050219_1,7165 HBL1_DMSO_200M_050219_1,7165,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7166 37.698 204.0 955700.0 25 0 87717.0 + 44706 YPHDPPKV 8 174 318.16782282383326 951.4816390717 3 318.1676513552666 MULTI CID FTMS 0 0 0 7154 224936.640625 0.0178928062689394 -9 0.3530960083007812 12 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 19.256988751693697 0.6264283240490721 3 YPHDPPKV 8 0 + 28.969 0.0 0.0 3.0446 3.0446 72.688 0.0 0.0 0.0 4.27616592881116 3.4239116477108382 3.4239116477108382 3.4239116477108382 0 0.718765315847925 0.0 0.0 0.0 + + YPHDPPKV;YPHDPPVK;YWYPPKV;YPHDPVPK;YPHDVPPK;YWYPPVK;YPWYPKV;YWYPVPK;YPWYPVK;YWYVPPK 3.0446;2.6848;2.4292;2.223;2.1527;2.0694;1.95;1.6077;1.5902;1.5373 +;-;-;-;-;-;-;-;-;- + 243 + 1 1.989 157278.1 1.0 2066 5098 7154 HBL1_DMSO_200M_050219_1,7166 HBL1_DMSO_200M_050219_1,7166,YPHDPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7167 37.712 800.0 286960.0 25 0 22509.0 23431 LTERSQRKA 9 238 363.5447992836008 1087.6125684510023 3 363.8792602419853 MULTI CID FTMS 0 0 0 7154 151601.3125 1.0 0 0.0 13 Unmodified _LTERSQRKA_ ENSG00000164742|ENST00000297323|ADCY1 18.1463463914782 0.3454829746528889 3 {I|L}T{M(Oxidation (M))|F} 3 7 35.054 0.0 0.0 3.2231 0.0 0.0 0.0 723.3900156486021 723.3900156486021 20.450397039808763 0.0 0.0 0.0 0 0.2658715643802767 1.2218487496163564 0.0 0.0 {I|L}T{M(Oxidation (M))|F} 3.2231 - 233 + 1 1.989 185647.3 0.6700000166893005 2067 5098 7154 HBL1_DMSO_200M_050219_1,7167 HBL1_DMSO_200M_050219_1,7167,LTERSQRKA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7168 37.726 800.0 188400.0 25 0 13061.0 + 2478 AQYEDIAQKS 10 137 576.7799868263596 1151.5454207195191 2 576.7803222537041 MULTI CID FTMS 0 0 0 7154 145093.515625 0.7945489541259755 -2 0.1122016906738281 14 Unmodified _AQYEDIAQKS_ ENSG00000167768|ENST00000252244|KRT1 35.079672537005266 0.2095246155385646 3 [QA]YED{I|L}AQ[KS] 10 0 [QA] + + 47.049 20.445 10.269 4.0857 4.0857 52.754 0.0 0.0 0.0 0.0 33.554177080693734 0.0 0.0 0 1.524227503252014 0.0 0.2887254899964357 0.555462187404089 + + [QA]YED{I|L}AQ[KS] 4.0857 + + 959 + 1 1.989 113987.2 0.8600000143051147 2068 5098 7154 HBL1_DMSO_200M_050219_1,7168 HBL1_DMSO_200M_050219_1,7168,AQYEDIAQKS False True AQYEDIAQKS 37.725571 576.780322253704 2027734.875 7154.0 ENSG00000167768|ENST00000252244|KRT1 5.1649783452351885 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7169 37.732 343.0 292410.0 25 0 20403.0 + 22137 DAFKDDRKI 9 104 554.316451418148 1106.6183499030958 2 554.3163329958916 MULTI CID FTMS 0 0 0 7154 123507.734375 0.571642727733726 -9 0.3530960083007812 15 Unmodified _LPPQQQQRI_ ENST00000467157.1_1_3:122864388-122880365:+|nuORF;ENSG00000065485|ENST00000316218|PDIA5 15.847184025352805 0.4077185912009129 3 {I|L}PP[PG]DDR 8 5 54.162 0.0 0.0 4.8943 0.0 0.0 0.0 256.16767297916255 256.16767297916255 27.96388461952553 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PP[PG]DDR 4.8943 - 253 + 1 1.989 80578.5 1.0 2069 5098 7154 HBL1_DMSO_200M_050219_1,7169 HBL1_DMSO_200M_050219_1,7169,LPPQQQQRI False True DAFKDDRKI 37.731785 554.316332995892 1570008.625 7154.0 ENST00000467157.1_1_3:122864388-122880365:+|nuORF;;ENSG00000065485|ENST00000316218|PDIA5 5.189633210500081 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7171 37.738 217.0 317070.0 25 0 21877.0 + 6666 EAYLGKKV 8 100 454.26483706636657 906.5151211995332 2 454.2656127810478 MULTI CID FTMS 0 0 0 7170 258468.484375 0.2629290260019303 2 -0.1416664123535156 1 Unmodified _EAYLGKKV_ ENSG00000044574|ENST00000324460|HSPA5 48.345845343767074 0.1470278396477103 3 {[CP]|[EA]}Y{I|L}[KG]KV 8 0 + 32.911 0.0 0.0 3.6305 3.6305 78.326 0.0 0.0 0.0 6.989700043360188 7.632414347745815 6.989700043360188 7.632414347745815 0 1.1307196863200843 0.0 0.0 0.0 + + {[CP]|[EA]}Y{I|L}[KG]KV;{[CP]|[EA]}Y{I|L}[KG]VK;{[CP]|[EA]}Y{I|L}V[KG]K 3.6305;2.7886;1.7359 +;-;- + 111 + 1 1.989 55925.9 1.0 2070 5099 7170 HBL1_DMSO_200M_050219_1,7171 HBL1_DMSO_200M_050219_1,7171,EAYLGKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7172 37.752 800.0 270760.0 25 0 53211.0 + + 38916 SIIGKKGESV 10 153 509.3004482623854 1016.5863435915708 2 509.2827636599541 MULTI CID FTMS 0 0 0 7170 97039.6484375 0.2728460449402246 -2 0.1238555908203125 2 Unmodified _TVLLSWLSV_ nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000197111|Q15366-7|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 14.838274106304384 0.4350285940865338 3 {[TV]|[{I|L}S]}{I|L}GK 5 -1 40.445 0.0 0.0 3.9785 0.0 0.0 0.0 515.2462512086659 515.2462512086659 28.85151878060192 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}GK 3.9785 - 403 + 1 1.989 168441.3 0.7699999809265137 2071 5099 7170 HBL1_DMSO_200M_050219_1,7172 HBL1_DMSO_200M_050219_1,7172,TVLLSWLSV False False SIIGKKGESV 37.751816 509.282763659954 3149132.25 7170.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000197111|Q15366-7|PCBP2;;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 4.966429074605306 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7174 37.756 42.0 1645800.0 25 0 186080.0 + 29671 QPATPTRTI 9 84 492.77735813345873 983.5401633337176 2 492.7773315310478 MULTI CID FTMS 0 0 0 7173 1419727.0 0.6425743945513697 -1 0.020050048828125 1 Unmodified _QPATPTRTI_ ENSG00000143190|ENST00000367866|POU2F1;nc|ENSG00000143190|P14859-2|POU2F1;nc|ENSG00000143190|P14859-3|POU2F1;nc|ENSG00000143190|P14859-4|POU2F1;nc|ENSG00000143190|P14859-5|POU2F1;nc|ENSG00000143190|P14859|POU2F1 23.78978130925829 0.2284941198415988 3 [QP]ATPT 6 3 28.065 0.0 0.0 2.8534 0.0 0.0 0.0 385.2197359674438 385.2197359674438 17.095690636129888 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 + [QP]ATPT 2.8534 + + 85 + 1 1.989 60754.4 1.0 2072 5100 7173 HBL1_DMSO_200M_050219_1,7174 HBL1_DMSO_200M_050219_1,7174,QPATPTRTI False True QPATPTRTI 37.756195 492.777331531048 33573724.0 7173.0 nc|ENSG00000143190|P14859-4|POU2F1;;ENSG00000143190|ENST00000367866|POU2F1;;nc|ENSG00000143190|P14859|POU2F1;;nc|ENSG00000143190|P14859-2|POU2F1;;nc|ENSG00000143190|P14859-5|POU2F1;;nc|ENSG00000143190|P14859-3|POU2F1 2.49917209148407 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7175 37.757 31.0 1728800.0 25 0 291180.0 + 36378 SYQESTKQL 9 84 542.2694352689783 1082.5243176047566 2 542.2700073122978 MULTI CID FTMS 0 0 0 7173 1932821.375 0.2163936743839655 -1 0.020050048828125 2 Unmodified _SYQESTKQL_ ENSG00000124422|ENST00000261497|USP22;ENSG00000247746|ENST00000500968|USP51;ENSG00000273820|ENST00000621775|USP27X;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22 79.59630418116434 0.0176145593575188 3 {[{M(Oxidation (M))|F}C]|[YS]}QESTKQ{I|L} 9 0 + 68.387 0.0 0.0 6.3174 6.3174 88.754 0.0 0.0 0.0 36.56681865368853 12.637277226317565 12.637277226317565 9.208187539523747 0 1.174742501084005 0.0 0.8494850021680094 1.5114393726401687 + + {[{M(Oxidation (M))|F}C]|[YS]}QESTKQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]ESTKQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QESTK[AG]{I|L};[AG]Y[RK]EQ[MT];{[{M(Oxidation (M))|F}C]|[YS]}[AG]ESTK[AG]{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QE[RK]C(Carbamidomethyl (C)){I|L};[AG]Y[RK]E[AG][MT];[YQ][RK]EQ[MT];{[{M(Oxidation (M))|F}C]|[YS]}[AG]E[RK]C(Carbamidomethyl (C)){I|L};{[{M(Oxidation (M))|F}C]|[YS]}QE[RK][CG]{I|L} 6.3174;5.4668;5.1151;4.7002;4.2685;4.0286;3.8496;3.4561;3.173;3.173 +;-;-;-;-;-;-;-;-;- + 601 + 1 1.989 46622.9 1.0 2073 5100 7173 HBL1_DMSO_200M_050219_1,7175 HBL1_DMSO_200M_050219_1,7175,SYQESTKQL True True SYQESTKQL 37.757374 542.270007312298 159704716.5 7173.0 ENSG00000124422|ENST00000261497|USP22;;ENSG00000273820|ENST00000621775|USP27X;;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;;nc|ENSG00000124422|Q9UPT9-2|USP22;;ENSG00000247746|ENST00000500968|USP51 9.202000935872396 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7176 37.759 48.0 1941100.0 25 0 190040.0 15342 IPLTLHTV 8 94 447.2760150369352 892.5374771406705 2 447.2762328982353 MULTI CID FTMS 0 0 0 7173 1441921.375 0.2207169582320128 -9 0.3773040771484375 3 Unmodified _IPLTLHTV_ ENSG00000039600|ENST00000265007|SOX30;nc|ENSG00000039600|O94993-2|SOX30 32.116972079565 0.368454113111938 3 {I|L}PP 3 6 50.445 0.0 0.0 5.6519 0.0 0.0 0.0 582.326508830893 582.326508830893 40.84121882396211 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PP 5.6519 - 123 + 1 1.989 76933.9 1.0 2074 5100 7173 HBL1_DMSO_200M_050219_1,7176 HBL1_DMSO_200M_050219_1,7176,IPLTLHTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7177 37.761 93.0 657470.0 25 0 49651.0 + 32035 RVINKEHVLAA 11 84 417.2506524117708 1248.7301278355123 3 417.2505370974541 MULTI CID FTMS 0 0 0 7173 782975.0 1.0 0 0.0 4 Unmodified _RVINKEHVLAA_ ENSG00000203760|ENST00000368328|CENPW;nc|ENSG00000203760|Q5EE01-2|CENPW 19.143941131932102 0.6369309327873195 3 V{I|L}AA 4 7 20.93 0.0 0.0 1.6761 0.0 0.0 876.4929641375081 0.0 876.4929641375081 0.0 6.32576888900239 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + V{I|L}AA 1.6761 + + 46 1 1.989 56993.7 1.0 2075 5100 7173 HBL1_DMSO_200M_050219_1,7177 HBL1_DMSO_200M_050219_1,7177,RVINKEHVLAA False True RVINKEHVLAA 37.760674 417.250537097454 3434160.0 7173.0 ENSG00000203760|ENST00000368328|CENPW;;nc|ENSG00000203760|Q5EE01-2|CENPW 3.848464091618856 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7178 37.763 101.0 1082900.0 25 0 163070.0 + 12535 GVGPVPARA 9 90 412.2428960572857 822.4712391813714 2 412.2428466677666 MULTI CID FTMS 0 0 0 7173 708894.75 0.1082021219617438 -2 0.0858573913574218 5 Unmodified _GVGPVPARA_ ENSG00000129636|ENST00000320640|ITFG1 39.957323273325 0.0756908302845263 3 [VG]GPVA 6 3 53.293 0.0 0.0 6.4797 0.0 0.0 0.0 339.1786287897094 339.1786287897094 28.767711195242768 0.0 0.0 0.0 0 0.6382104921644451 2.0 0.0 0.0 [VG]GPVA 6.4797 - 351 + 1 1.989 93062.9 1.0 2076 5100 7173 HBL1_DMSO_200M_050219_1,7178 HBL1_DMSO_200M_050219_1,7178,GVGPVPARA True True GVGPVPARA 37.762839 412.242846667767 83484296.0 7173.0 ENSG00000129636|ENST00000320640|ITFG1 3.995072523752848 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7179 37.765 103.0 782250.0 25 0 185970.0 -1 0 101 337.2154873946348 672.4164218560696 2 337.2153198122978 MULTI CID FTMS 0 0 0 7173 574344.0 0.4636490147960959 -1 0.020050048828125 6 3 VTKN{I|L}V 6 -1 + 54.954 0.0 0.0 8.1726 8.1726 94.189 0.0 0.0 0.0 33.187587626244124 12.430380486862944 12.430380486862944 9.420080530223132 0 0.6747425010840047 1.6989700043360187 0.0 0.3494850021680094 VTKN{I|L}V;VTKGG{I|L}V;VTKNV{I|L};VTK{[VA]|[{I|L}G]}GV;VTKGGV{I|L} 8.1726;6.7717;6.324;6.252;4.9231 -;-;-;-;- 267 + 1 1.989 65954.9 1.0 2077 5100 7173 HBL1_DMSO_200M_050219_1,7179 HBL1_DMSO_200M_050219_1,7179, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7180 37.769 204.0 727000.0 25 0 87154.0 -1 0 54 500.0304063829482 2495.115649581741 5 500.2318603396416 MULTI CID FTMS 0 0 0 7173 451992.71875 0.1604100170039131 -3 0.1439056396484375 7 3 CC(Carbamidomethyl (C)) 2 -1 17.959 0.0 0.0 0.71976 0.0 0.0 2214.012443260031 0.0 2214.012443260031 0.0 7.474250108400469 0.0 0.0 0 0.0 0.0 0.0 0.0 CC(Carbamidomethyl (C)) 0.71976 - 42 1 1.989 120970.0 1.0 2078 5100 7173 HBL1_DMSO_200M_050219_1,7180 HBL1_DMSO_200M_050219_1,7180, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7181 37.774 258.0 722960.0 25 0 63664.0 -1 0 74 624.7862646997731 2495.1159529326924 4 625.0377075076103 MULTI CID FTMS 0 0 0 7173 383791.5 0.1178993845626413 -3 0.1439056396484375 8 3 DD 2 -1 20.969 0.0 0.0 0.84041 0.0 0.0 728.339829377183 1533.7029665909392 2262.0427959681224 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 DD 0.84041 - 28 + 1 1.989 142529.7 1.0 2079 5100 7173 HBL1_DMSO_200M_050219_1,7181 HBL1_DMSO_200M_050219_1,7181, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7182 37.779 287.0 429160.0 25 0 43168.0 + 29782 QPYNSRPAV 9 137 516.2669982910633 1030.5194436489264 2 516.2675048708916 MULTI CID FTMS 0 0 0 7173 298813.71875 0.8700230688924074 -1 0.020050048828125 9 Unmodified _QPYNSRPAV_ ENSG00000144597|ENST00000396842|EAF1;nc|ENSG00000144597|Q96JC9-2|EAF1 39.94969957227396 0.0757326808254658 3 [QP]YNSRAPV 9 2 + 46.983 0.0 0.0 4.5592 4.5592 82.895 0.0 0.0 0.0 18.923636674837915 10.674100046527355 10.674100046527355 9.208187539523747 0 1.004432191740108 0.638272163982407 0.0 0.8494850021680094 [QP]YNSRAPV;[QP]YGGSRAPV;[PA][EP]KMYPV;[QP][WP]K[YN]V;[{I|L}T]YMK[YN]V;[QP]V[VS]DR[KC];[{I|L}T][C(Carbamidomethyl (C))Q]SR[PA]V;[QP]V{[RE]|[WV]}[TA][KC];{[QD]|[EN]|[WG]|[KD]|[RS]}VVS[C(Carbamidomethyl (C))Q]PV;{[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}K[YN]V 4.5592;3.6657;2.0327;1.6036;0.95016;0.70939;0.6356;0.57144;0.44372;0.056609 -;-;-;-;-;-;-;-;-;- 306 + 1 1.989 101549.6 1.0 2080 5100 7173 HBL1_DMSO_200M_050219_1,7182 HBL1_DMSO_200M_050219_1,7182,QPYNSRPAV True True QPYNSRPAV 37.778993 516.267504870892 2093051.625 7173.0 nc|ENSG00000144597|Q96JC9-2|EAF1;;ENSG00000144597|ENST00000396842|EAF1 7.642647902170817 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7183 37.793 783.0 223770.0 25 0 20660.0 + 31383 RNVSTGDVNVE 11 146 595.2938665315763 1188.5731801299526 2 595.2940551638603 MULTI CID FTMS 0 0 0 7173 245305.03125 0.8489121751446737 -1 0.020050048828125 10 Unmodified _RNVSTGDVNVE_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 62.86856922530385 0.057503257068159 3 {[NV]|[RG]}RSTGDVNVE 11 2 + 78.27 0.0 0.0 6.5852 6.5852 81.698 0.0 0.0 0.0 2.5404627391502856 5.862435673934272 2.5404627391502856 2.5404627391502856 0 1.0 0.0 0.7059771852360797 1.1549471895720984 {[NV]|[RG]}RSTGDVNVE;[KG]RDTGDVNVE;[RN]VSTGDVNVE;{[NV]|[RG]}RSTGDVGGVE;[VS][RN]TGDVNVE;[KG]RDTGDVGGVE;[DV]EV{[WT]|[RM]}VNVE;[RN]VSTGDVGGVE;[VS][RN]TGDVGGVE;{M(Oxidation (M))|F}VNVD{[TV]|[{I|L}S]}[PA]VE 6.5852;6.3714;5.9623;5.8172;5.7449;5.6034;5.3342;5.1943;4.9768;4.7871 -;-;+;-;-;-;-;-;-;- + 921 1 1.989 138573.6 1.0 2081 5100 7173 HBL1_DMSO_200M_050219_1,7183 HBL1_DMSO_200M_050219_1,7183,RNVSTGDVNVE True True RNVSTGDVNVE 37.792547 595.29405516386 1920264.25 7173.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 8.363449414571127 2.0 True 11.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 7184 37.796 193.0 395210.0 25 0 50942.0 + 33695 SKAVACKV 8 105 403.23273916866185 0 403.2325012087822 PEAK CID FTMS 0 0 0 7173 243902.25 0.5132566064047716 -24 0.9570045471191406 11 Unmodified _SKAVACKV_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN 11.640296217721598 0.5231213682848052 3 H 1 -1 4.9743 0.0 0.0 0.61834 0.0 0.0 282.1604723785362 382.20456873111567 664.3650411096519 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 H 0.61834 - 14 + 1 1.989 66013.1 1.0 2082 5100 7173 HBL1_DMSO_200M_050219_1,7184 HBL1_DMSO_200M_050219_1,7184,SKAVACKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7185 37.8 173.0 445230.0 25 0 28473.0 44710 YPHDPPKV 8 103 476.748106647566 951.481660361932 2 476.7479431033134 MULTI CID FTMS 0 0 0 7173 229237.4375 0.0648578802505136 -7 0.359405517578125 12 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 37.97399986684836 0.2681860861828418 3 YP[HD]PPKV 8 0 + 55.175 0.0 0.0 5.7988 5.7988 86.003 0.0 0.0 0.0 42.41053211073865 9.060413759860992 9.060413759860992 8.834872515139708 0 1.2302046884880935 1.3979400086720375 0.0 0.0 + + YP[HD]PPKV;YPWYPKV;YPA{I|L}{[RE]|[WV]}{[CT]|[{M(Oxidation (M))|F}G]};YWYPPKV;[{I|L}P][QP]NAA{[QN]|[E{I|L}]|[KN]};[{I|L}P][KT][HD]{[QN]|[E{I|L}]|[KN]};[HD][RV]{I|L}A{[QN]|[E{I|L}]|[KN]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V[HD]{[QN]|[E{I|L}]|[KN]};[KP][{I|L}T][HD]{[QN]|[E{I|L}]|[KN]};[{I|L}P][HK]{[ES]|[DT]|[{I|L}C]}{[QN]|[E{I|L}]|[KN]} 5.7988;4.8703;3.9295;3.6694;1.3415;1.18;1.1224;1.0308;0.67855;0.66909 +;-;-;-;-;-;-;-;-;- + 321 + 1 1.989 64303.4 1.0 2083 5100 7173 HBL1_DMSO_200M_050219_1,7185 HBL1_DMSO_200M_050219_1,7185,YPHDPPKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7186 37.806 360.0 379080.0 25 0 153950.0 -1 GIFAKAVSM 9 109 470.2538831967125 938.4932134602252 2 470.2567626833916 MULTI CID FTMS 0 0 0 7173 207462.65625 0.1529918423155556 -13 0.5341720581054688 13 Oxidation (M) _GIFAKAVSM(Oxidation (M))_ nc|ENSG00000007341|Q8TDW4-5|ST7L;nc|ENSG00000007341|Q8TDW4-6|ST7L 8.593279151180031 0.6146971463335029 3 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 1.4379 0.0 0.0 773.4468858008486 0.0 773.4468858008486 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.4379 + + 81 + 1 1.989 110816.7 1.0 2084 5100 7173 HBL1_DMSO_200M_050219_1,7186 HBL1_DMSO_200M_050219_1,7186,GIFAKAVSM False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 7187 37.812 278.0 344500.0 25 0 29019.0 + 34875 SQGFSHSQM 9 130 504.7139149531706 1007.4132769731413 2 504.7140685915947 MULTI CID FTMS 0 0 0 7173 196079.984375 0.737417424017168 1 -0.1216163635253906 14 Unmodified _SQGFSHSQM_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 41.95555342248728 0.0647214845423414 3 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QMSQ 9 4 + 32.294 0.0 0.0 3.2056 3.2056 71.008 0.0 0.0 0.0 18.68825918141796 5.083851682779173 5.083851682779173 2.230749808046326 0 0.4876954943324546 0.619788758288394 0.6307196863200843 0.6549471895720985 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QMSQ;{[QS]|[NT]}{[WN]|[YH]}QMSQ;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]MSQ;{[QS]|[NT]}{[WN]|[YH]}[AG]MSQ;{[QS]|[NT]}G[C(Carbamidomethyl (C))R]{[DA]|[EG]}SQ;{[QS]|[NT]}[RN]{[C(Carbamidomethyl (C))E]|[WC]}SQ;{[QS]|[NT]}{[C(Carbamidomethyl (C))E]|[WC]}WW{I|L};{[QS]|[NT]}[YN]S[C(Carbamidomethyl (C))H]{I|L};{[QS]|[NT]}[PS][PS]{M(Oxidation (M))|F}QM;{[QS]|[NT]}[YQ]HSQM 3.2056;2.9842;2.2916;2.0648;2.0377;1.3603;1.0561;0.91996;0.91761;0.89753 -;-;-;-;-;-;-;-;-;- 319 1 1.989 78533.5 1.0 2085 5100 7173 HBL1_DMSO_200M_050219_1,7187 HBL1_DMSO_200M_050219_1,7187,SQGFSHSQM True True SQGFSHSQM 37.812385 504.714068591595 1234490.375 7173.0 ENSG00000181143|ENST00000397910|MUC16 4.577513535817464 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7188 37.817 238.0 317720.0 25 0 18649.0 + 31589 RQQEKHFEV 9 98 400.8752217827788 1199.6038359485365 3 400.8756896853447 MULTI CID FTMS 0 0 0 7173 192428.765625 0.9346133320948158 -1 0.020050048828125 15 Unmodified _RQQEKHFEV_ ENSG00000186185|ENST00000593135|KIF18B;nc|ENSG00000186185|Q86Y91-6|KIF18B 19.62595529434964 0.305431704817896 3 {[{M(Oxidation (M))|F}H]|[RQ]}K[VS]AH{M(Oxidation (M))|F}EV 10 4 + 38.083 0.0 0.0 3.1747 3.1747 81.91 0.0 0.0 0.0 5.764837301042718 26.40092514408778 5.764837301042718 18.21578805351165 0 0.3252574989159953 0.0 0.5 0.4247425010840047 {[{M(Oxidation (M))|F}H]|[RQ]}K[VS]AH{M(Oxidation (M))|F}EV;HH{M(Oxidation (M))|F}Y[KS][WP]V;HH{M(Oxidation (M))|F}Y[KS]V[PS]V;HH{M(Oxidation (M))|F}Y[WK][PS]V;HH{M(Oxidation (M))|F}KKHHMV;{[{M(Oxidation (M))|F}H]|[RQ]}K[VS]A[KQ]QQ;{[{M(Oxidation (M))|F}H]|[RQ]}K[VS]AQQQQ 3.1747;1.6562;1.1543;1.0075;0.61202;0.36435;0.36435 -;-;-;-;-;-;- 134 1 1.989 64447.7 1.0 2086 5100 7173 HBL1_DMSO_200M_050219_1,7188 HBL1_DMSO_200M_050219_1,7188,RQQEKHFEV False True RQQEKHFEV 37.816838 400.875689685345 1244456.75 7173.0 ENSG00000186185|ENST00000593135|KIF18B;;nc|ENSG00000186185|Q86Y91-6|KIF18B 5.552495002746582 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7189 37.823 330.0 323910.0 25 0 24988.0 + 3694 DAFKDDRKI 9 121 554.2932738241168 1106.5719947150335 2 554.2929565310478 MULTI CID FTMS 0 0 0 7173 170684.375 1.0 0 0.0 16 Unmodified _DAFKDDRKI_ ENSG00000065485|ENST00000316218|PDIA5;ENST00000467157.1_1_3:122864388-122880365:+|nuORF 18.721224879955976 0.3299216912490967 3 DA{M(Oxidation (M))|F}KDDRK{I|L} 9 0 + 61.961 0.0 0.0 5.5994 5.5994 84.436 0.0 0.0 0.0 24.798121020293657 7.458671815958148 7.458671815958148 7.458671815958148 0 0.9802046884880938 1.3979400086720375 0.0 0.0 + + DA{M(Oxidation (M))|F}KDDRK{I|L};DA{M(Oxidation (M))|F}KDD[K{I|L}]R;DA{M(Oxidation (M))|F}K[Q{I|L}]ETR;DA{M(Oxidation (M))|F}K[Q{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};DA{M(Oxidation (M))|F}K[Q{I|L}]{[TV]|[{I|L}S]}W;W{M(Oxidation (M))|F}K{[CT]|[{M(Oxidation (M))|F}G]}{[VA]|[{I|L}G]}PR 5.5994;4.9253;3.5894;3.0628;2.8701;1.7913 +;-;-;-;-;- + 330 + 1 1.989 86780.4 1.0 2087 5100 7173 HBL1_DMSO_200M_050219_1,7189 HBL1_DMSO_200M_050219_1,7189,DAFKDDRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7190 37.837 800.0 166110.0 25 0 16181.0 + 18506 KYQAQDNFM 9 171 580.7556118332155 1159.496670733231 2 580.7555419802666 MULTI CID FTMS 0 0 0 7173 158470.296875 0.6571586930743135 -1 0.020050048828125 17 Oxidation (M) _KYQAQDNFM(Oxidation (M))_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 103.41943736471065 0.0091853052135676 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GKAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F} 10 3 + 98.974 0.0 0.0 8.5359 8.5359 88.839 0.0 0.0 0.0 4.69653843860867 6.505149978319906 4.69653843860867 4.393326938302636 0 2.2104093769761874 0.7958800173440752 1.0114393726401687 1.8441876774005248 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GKAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KGAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};[YK]QAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[HG]|PP}PQAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};[YQ]KAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};[YK]AGAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GKA[AG]DN{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GKAQDGG{M(Oxidation (M))|F}{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]NKQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[HG]|PP}PAGAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F} 8.5359;8.157;8.1309;8.0761;7.8164;7.7961;7.7455;7.7455;7.7355;7.4167 -;-;+;-;-;-;-;-;-;- + 7902 1 1.989 102747.7 0.75 2088 5100 7173 HBL1_DMSO_200M_050219_1,7190 HBL1_DMSO_200M_050219_1,7190,KYQAQDNFM True False KYQAQDNFM 37.83667 580.755541980267 1867477.25 7173.0 ENST00000379752.5_1_1:157029186-157029948:-|nuORF;;nc|ENSG00000122692|Q2TAY7-2|SMU1;;ENSG00000122692|ENST00000397149|SMU1 8.557692845662435 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7191 37.845 443.0 154180.0 25 0 16815.0 -1 0 99 529.2303577568393 528.2230812902393 1 529.2350952029228 MULTI CID FTMS 0 0 0 7173 119518.1796875 0.8879625659050558 6 -0.4607162475585937 18 3 [Y{I|L}]S{M(Oxidation (M))|F} 4 -1 + 23.826 0.0 0.0 4.5106 4.5106 84.227 0.0 0.0 0.0 10.727338398880548 11.43050702455464 10.727338398880548 11.778128087146762 0 0.1150219788552205 1.6989700043360187 0.0 0.0 [Y{I|L}]S{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{M(Oxidation (M))|F};T[YV]{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}YP 4.5106;2.2809;1.3776;1.1571 -;-;-;- 37 1 1.989 60431.4 1.0 2089 5100 7173 HBL1_DMSO_200M_050219_1,7191 HBL1_DMSO_200M_050219_1,7191, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7192 37.86 800.0 47304.0 25 0 2002.1 + 26303 NQYEMQELAF 10 76 636.7845763374014 1271.5545997416027 2 637.2869140505791 MULTI CID FTMS 0 0 0 7173 113090.625 1.0 0 0.0 19 Unmodified _NQYEMQELAF_ REV__ENSG00000071909|ENST00000408978|MYO3B;REV__ENST00000409940.6_1_2:171034716-171376051:+|nuORF;REV__ENST00000438642.6_1_2:171034716-171400468:+|nuORF;REV__ENST00000602629.1_1_2:171225816-171400468:+|nuORF;REV__nc|ENSG00000071909|Q8WXR4-2|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-3|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-4|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-5|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-6|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-7|MYO3B 6.2057823575117 0.6979311171683138 3 A{M(Oxidation (M))|F} 2 -1 14.553 0.0 0.0 1.1445 0.0 0.0 1035.4383105343743 0.0 1035.4383105343743 0.0 2.1322941970294043 0.0 0.0 0 0.5 0.0 0.0 0.0 A{M(Oxidation (M))|F} 1.1445 + + 105 + 1 1.989 34809.9 0.6499999761581421 2090 5100 7173 HBL1_DMSO_200M_050219_1,7192 HBL1_DMSO_200M_050219_1,7192,NQYEMQELAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7193 37.873 800.0 107330.0 25 0 29370.0 43235 WAWKKRATP 9 95 572.3253327271888 0 572.3258544802666 PEAK CID FTMS 0 0 0 7173 106743.9453125 0.954755148084536 1 -0.1216163635253906 20 Unmodified _WAWKKRATP_ LTR1_dup85|chr7:101629186-101629993:-|70.06123591877306|0.0003248618387484|17.72|48.0|15|2|sense 4.3292370932331545 0.3444685223463734 3 S 1 9 3.4949 0.0 0.0 0.30586 0.0 0.0 920.5349447739104 132.04598413638908 1052.5809289102997 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.30586 - 2 + 1 1.989 68040.5 0.7400000095367432 2091 5100 7173 HBL1_DMSO_200M_050219_1,7193 HBL1_DMSO_200M_050219_1,7193,WAWKKRATP False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 7195 37.878 11.0 2666300.0 25 0 298790.0 + 3815 DAIRQSNQI 9 62 522.7750736687035 1043.535594404207 2 522.7755004763603 MULTI CID FTMS 0 0 0 7194 3704131.25 0.2794996989297291 1 -0.0963783264160156 1 Unmodified _DAIRQSNQI_ ENSG00000269335|ENST00000594239|IKBKG;nc|ENSG00000269335|Q9Y6K9-2|IKBKG;nc|ENSG00000269335|Q9Y6K9-3|IKBKG 47.594388314883695 0.0456443387682827 3 {[DA]|[EG]}{I|L}RQSNQ{I|L} 9 0 + 76.493 0.0 0.0 7.3302 7.3302 91.669 0.0 0.0 0.0 16.989700043360187 16.478174818886373 16.478174818886373 9.208187539523747 0 0.9876954943324544 2.0 0.3494850021680094 0.4247425010840047 + + {[DA]|[EG]}{I|L}RQSNQ{I|L};{[DA]|[EG]}{I|L}R[AG]SNQ{I|L};{[DA]|[EG]}{I|L}RQSGGQ{I|L};{[DA]|[EG]}{I|L}RQSN[AG]{I|L};{[QN]|[E{I|L}]|[KN]}GRQSNQ{I|L};{[QN]|[E{I|L}]|[KN]}GR[AG]SNQ{I|L};{[QN]|[E{I|L}]|[KN]}GRQSGGQ{I|L};{[QN]|[E{I|L}]|[KN]}GRQSN[AG]{I|L};{[DA]|[EG]}{I|L}RQS{[VA]|[{I|L}G]}{[QG]|[NA]};{[DA]|[EG]}{I|L}RQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QG]|[NA]} 7.3302;6.4478;6.4478;6.4478;5.7021;4.8197;4.8197;4.8197;3.6024;2.6416 +;-;-;-;-;-;-;-;-;- + 104 1 1.99 29045.3 1.0 2092 5101 7194 HBL1_DMSO_200M_050219_1,7195 HBL1_DMSO_200M_050219_1,7195,DAIRQSNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7196 37.879 41.0 863680.0 25 0 41842.0 + -1 CLCFAPCIAF 10 72 629.7757750052342 1257.5369970772683 2 629.7761718630791 MULTI CID FTMS 0 0 0 7194 1231740.625 0.0951854993457323 4 -0.2457046508789062 2 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 18.13498045792455 0.5432546531930572 3 [QA]HDEAQQNA{M(Oxidation (M))|F} 11 -1 + 81.674 0.0 0.0 6.4948 6.4948 85.673 0.0 0.0 0.0 6.759990530538445 52.39099392749873 6.759990530538445 5.752574989159953 0 1.1549471895720984 0.0 0.3494850021680094 0.2887254899964357 [QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEAQNQA{M(Oxidation (M))|F};[QA]HDEAQ[AG]NA{M(Oxidation (M))|F};[QA]HDEA[AG]QNA{M(Oxidation (M))|F};[QA]HDEAQQGGA{M(Oxidation (M))|F};[QA]HDEAQN[AG]A{M(Oxidation (M))|F};[QA]HDEA[AG]NQA{M(Oxidation (M))|F};[QA]HDEAQGGQA{M(Oxidation (M))|F};[HD][QA]EAQQNA{M(Oxidation (M))|F};[QA]HDEA[AG]QGGA{M(Oxidation (M))|F} 6.4948;6.0373;5.7689;5.7689;5.7689;5.3114;5.3114;5.3114;5.0906;5.0454 -;-;-;-;-;-;-;-;-;- 861 1 1.99 30022.2 1.0 2093 5101 7194 HBL1_DMSO_200M_050219_1,7196 HBL1_DMSO_200M_050219_1,7196,CLCFAPCIAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7197 37.884 252.0 460500.0 25 0 52046.0 + 38917 TVLLSWLSV 9 102 509.3004482623854 1016.5863435915708 2 509.3005859255791 MULTI CID FTMS 0 0 0 7194 355657.15625 1.0 0 0.0 3 Unmodified _TVLLSWLSV_ REV__ENSG00000145248|ENST00000273861|SLC10A4 42.09456458481378 0.0639583784996157 3 VT{I|L}GK 5 -1 56.81 0.0 0.0 5.5883 0.0 0.0 0.0 515.2479194201218 515.2479194201218 33.243631364824395 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VT{I|L}GK 5.5883 - 713 + 1 1.99 95072.0 1.0 2094 5101 7194 HBL1_DMSO_200M_050219_1,7197 HBL1_DMSO_200M_050219_1,7197,TVLLSWLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7198 37.886 120.0 445330.0 25 0 41871.0 + 22236 LPRGSSPSV 9 100 450.25060526427393 898.4866575953479 2 450.2504760622978 MULTI CID FTMS 0 0 0 7194 349621.1875 0.1511029229037144 3 -0.2332344055175781 4 Unmodified _LPRGSSPSV_ ENSG00000118707|ENST00000373872|TGIF2 29.081581746732265 0.1611639662936252 3 SPSV 4 5 27.154 0.0 0.0 3.0221 0.0 0.0 510.2904835431656 0.0 510.2904835431656 0.0 13.174100046527355 0.0 0.0 0 0.7104093769761876 0.0 0.9247425010840048 0.0 + SPSV 3.0221 + + 80 1 1.99 46633.4 1.0 2095 5101 7194 HBL1_DMSO_200M_050219_1,7198 HBL1_DMSO_200M_050219_1,7198,LPRGSSPSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7199 37.892 292.0 413090.0 25 0 29894.0 + 3649 DAEMTTRMV 9 139 535.2362804984871 1068.458008063774 2 535.2366821169853 MULTI CID FTMS 0 0 0 7194 336472.5625 0.0672983081245782 6 -0.3957977294921875 5 Oxidation (M) _DAEMTTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 49.55428908609986 0.0413471690215031 3 {[DA]|[EG]}EMTTR{M(Oxidation (M))|F}V 9 0 + 65.873 0.0 0.0 6.1653 6.1653 87.509 0.0 0.0 0.0 40.8855848387832 0.2456819149073652 0.2456819149073652 9.156235460461131 0 1.274227503252014 2.0 0.3807196863200844 0.3494850021680094 + + {[DA]|[EG]}EMTTR{M(Oxidation (M))|F}V;{[DA]|[EG]}EMS[RP]TY;{[DA]|[EG]}EVWWTY;{[DA]|[EG]}EV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R{M(Oxidation (M))|F}V;{[DA]|[EG]}EMT[W{I|L}]{[CT]|[{M(Oxidation (M))|F}G]};{[DA]|[EG]}{M(Oxidation (M))|F}[DV]TR{M(Oxidation (M))|F}V;{[DA]|[EG]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}DR{M(Oxidation (M))|F}V;{[DA]|[EG]}EM[KA][NS]{[CT]|[{M(Oxidation (M))|F}G]};WE[W{M(Oxidation (M))|F}]R{M(Oxidation (M))|F}V;{[DA]|[EG]}{M(Oxidation (M))|F}[NS]NR{M(Oxidation (M))|F}V 6.1653;5.3083;4.4656;4.4104;4.0024;3.4213;3.1395;3.0211;3.0126;2.912 +;-;-;-;-;-;-;-;-;- + 617 + 1 1.99 96969.9 1.0 2096 5101 7194 HBL1_DMSO_200M_050219_1,7199 HBL1_DMSO_200M_050219_1,7199,DAEMTTRMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7200 37.905 800.0 187360.0 25 0 15513.0 17448 KNQLIEQFPG 10 141 587.3148683423678 1172.6151837515356 2 587.3151733279228 MULTI CID FTMS 0 0 0 7194 183302.640625 1.0 0 0.0 6 Unmodified _KNQLIEQFPG_ ENSG00000232119|ENST00000371317|MCTS1;ENST00000487133.1_1_X:119739298-119742228:+|nuORF;nc|ENSG00000232119|Q9ULC4-2|MCTS1;nc|ENSG00000232119|Q9ULC4-3|MCTS1 32.78568957990786 0.2337485590374503 3 GGKQ{I|L}ED{[NV]|[RG]}[{I|L}T] 11 9 + 73.003 0.0 0.0 6.2257 6.2257 87.65 0.0 0.0 0.0 51.40186683248914 2.530612770171274 2.530612770171274 9.128498242810991 0 1.7720774603115346 0.3467874862246563 1.035666875892183 0.4247425010840047 GGKQ{I|L}ED{[NV]|[RG]}[{I|L}T];GGK[AG]{I|L}ED{[NV]|[RG]}[{I|L}T];{[QN]|[E{I|L}]|[KN]}K{I|L}[WP]{M(Oxidation (M))|F}[Q{I|L}];[KQ]GG{I|L}[WP]{M(Oxidation (M))|F}[Q{I|L}];{[QG]|[NA]}KG{I|L}[WP]{M(Oxidation (M))|F}[Q{I|L}];[AG]KGG{I|L}[WP]{M(Oxidation (M))|F}[Q{I|L}];[AG]GKG{I|L}[WP]{M(Oxidation (M))|F}[Q{I|L}];{[QG]|[NA]}GK{I|L}[WP]{M(Oxidation (M))|F}[Q{I|L}];[AG]GGK{I|L}[WP]{M(Oxidation (M))|F}[Q{I|L}];[AG]NK{I|L}[WP]{M(Oxidation (M))|F}[Q{I|L}] 6.2257;5.4472;3.713;3.3227;3.3118;3.2388;3.228;3.0779;2.9941;2.8402 -;-;-;-;-;-;-;-;-;- 1503 + 1 1.99 112767.5 0.8799999952316284 2097 5101 7194 HBL1_DMSO_200M_050219_1,7200 HBL1_DMSO_200M_050219_1,7200,KNQLIEQFPG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7201 37.913 429.0 409010.0 25 0 20968.0 + -1 EKMFQHFYCQ 10 158 459.5319752405526 1375.5740963218575 3 459.5323974490166 MULTI CID FTMS 0 0 0 7194 178907.5 1.0 0 0.0 7 Oxidation (M) _EKM(Oxidation (M))FQHFYCQ_ REV__ENSG00000138079|ENST00000260649|SLC3A1;REV__nc|ENSG00000138079|Q07837-3|SLC3A1;REV__nc|ENSG00000138079|Q07837-5|SLC3A1;REV__nc|ENSG00000138079|Q07837-6|SLC3A1;REV__nc|ENSG00000138079|Q07837-7|SLC3A1 4.715918219556657 0.704822610516493 3 [VP][WR]AN{M(Oxidation (M))|F}PC 9 -1 34.306 0.0 0.0 2.4939 0.0 0.0 0.0 302.04352641304644 302.04352641304644 19.61303739409744 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 1.0994850021680094 [VP][WR]AN{M(Oxidation (M))|F}PC 2.4939 - 676 1 1.99 138841.0 1.0 2098 5101 7194 HBL1_DMSO_200M_050219_1,7201 HBL1_DMSO_200M_050219_1,7201,EKMFQHFYCQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7202 37.927 800.0 186630.0 25 0 15945.0 + + 11320 HQVDPTEPVGGA 12 130 603.7912874290848 0 603.7914916872978 PEAK CID FTMS 0 0 0 7194 149466.953125 0.5440791914906493 -1 0.1216163635253906 8 Unmodified _GEWTYVAVPGQ_ nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 16.149105407346934 0.3934762919021404 3 TM{M(Oxidation (M))|F}PVGG 7 -1 18.293 0.0 0.0 1.5174 0.0 0.0 427.20582509330274 86.02544580631093 513.2312708996137 0.0 0.0 0.0 0.0 0 1.3935078169319297 0.0 0.3054621874040891 0.0 TM{M(Oxidation (M))|F}PVGG 1.5174 - 1071 + 1 1.99 112321.1 0.800000011920929 2099 5101 7194 HBL1_DMSO_200M_050219_1,7202 HBL1_DMSO_200M_050219_1,7202,GEWTYVAVPGQ False False HQVDPTEPVGGA 37.926811 603.791491687298 2369103.0 7194.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 8.50745407740275 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7203 37.941 800.0 255480.0 25 0 19678.0 -1 0 71 832.71288912421 2495.11683797283 3 833.0484496951103 MULTI CID FTMS 0 0 0 7194 139350.9375 0.4271366747702546 -2 0.1416664123535156 9 3 [RD]WRDD 6 -1 29.799 0.0 0.0 1.1943 0.0 0.0 0.0 1648.7286480132586 1648.7286480132586 20.33477804557308 0.0 0.0 0.0 0 0.5 0.0 0.2614393726401688 0.3054621874040891 [RD]WRDD 1.1943 - 69 1 1.99 142136.0 0.6499999761581421 2100 5101 7194 HBL1_DMSO_200M_050219_1,7203 HBL1_DMSO_200M_050219_1,7203, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7204 37.954 800.0 90837.0 25 0 4897.8 -1 YGTDMVSCFG 10 122 568.7255564173627 0 568.7253906130791 PEAK CID FTMS 0 0 0 7194 114163.953125 1.0 0 0.0 10 Carbamidomethyl (C) _YGTDMVSC(Carbamidomethyl (C))FG_ ENST00000569380.5_1_16:1827975-1828401:-|nuORF 10.823927491677226 0.3685635357628707 3 Q 1 -1 6.9897 0.0 0.0 0.6156 0.0 0.0 161.07981575380853 843.2733050366627 1004.3531207904712 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.6156 - 26 + 1 1.99 58917.3 0.7300000190734863 2101 5101 7194 HBL1_DMSO_200M_050219_1,7204 HBL1_DMSO_200M_050219_1,7204,YGTDMVSCFG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7205 37.97 800.0 23149.0 25 0 4858.9 -1 0 29 1149.129592179788 3444.366947139564 3 1150.132495105267 MULTI CID FTMS 0 0 0 7194 66378.0078125 1.0 0 0.0 11 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20293 0.0 0.0 1999.687700168664 1294.590847962587 3294.2785481312512 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20293 - 2 + 1 1.99 29022.8 0.3799999952316284 2102 5101 7194 HBL1_DMSO_200M_050219_1,7205 HBL1_DMSO_200M_050219_1,7205, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7207 37.974 28.0 2013500.0 25 0 314960.0 + 43122 VYPERSTSY 9 63 551.2639447778929 1100.5133366225857 2 551.2642700076103 MULTI CID FTMS 0 0 0 7206 1858959.875 0.4174658255637875 4 -0.2427215576171875 1 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 24.020572477871973 0.2255576514309169 3 [YV]PE 4 5 43.188 0.0 0.0 3.9243 0.0 0.0 0.0 609.264179697574 609.264179697574 26.73393743112328 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + [YV]PE 3.9243 + + 77 + 1 1.99 49280.1 1.0 2103 5102 7206 HBL1_DMSO_200M_050219_1,7207 HBL1_DMSO_200M_050219_1,7207,VYPERSTSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7208 37.975 38.0 1290600.0 25 0 158150.0 + 21231 LPDHSHMEI 9 57 539.7543191374821 1077.494085341764 2 539.7549316287041 MULTI CID FTMS 0 0 0 7206 1130451.125 0.3484746408232495 3 -0.1493263244628906 2 Unmodified _LPDHSHMEI_ REV__ENSG00000133103|ENST00000455146|COG6;REV__nc|ENSG00000133103|Q9Y2V7-2|COG6 12.531546534597751 0.4974689918368763 3 {I|L}PVG 4 -1 49.725 0.0 0.0 4.6149 0.0 0.0 0.0 708.2409762018186 708.2409762018186 31.02813489503241 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 {I|L}PVG 4.6149 - 36 + 1 1.99 46438.8 1.0 2104 5102 7206 HBL1_DMSO_200M_050219_1,7208 HBL1_DMSO_200M_050219_1,7208,LPDHSHMEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7209 37.977 17.0 4325400.0 25 0 731530.0 + 44707 YPHDPPKV 8 86 318.16782282383326 951.4816390717 3 318.1675903201103 MULTI CID FTMS 0 0 0 7206 3123907.0 0.248494254194758 -5 0.3619003295898437 3 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 15.847184025352805 0.6768015514314958 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPP 5 3 21.95 0.0 0.0 2.307 0.0 0.0 0.0 405.2142800231248 405.2142800231248 -0.3557296993147574 0.0 -0.3557296993147574 0.0 0 0.0 0.0 0.2742275032520141 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPP 2.307 + + 113 1 1.99 68647.2 1.0 2105 5102 7206 HBL1_DMSO_200M_050219_1,7209 HBL1_DMSO_200M_050219_1,7209,YPHDPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7210 37.978 47.0 1193500.0 25 0 118100.0 + 33249 SFPASSGVSH 10 80 488.2303025289275 974.446052124655 2 488.2299987673759 MULTI CID FTMS 0 0 0 7206 1034298.5 0.7138245562939525 14 -1.216960906982422 4 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 47.74868867922204 0.0933642699623533 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH 10 0 + 77.261 0.0 0.0 7.9287 7.9287 96.313 0.0 0.0 0.0 53.07950361376122 15.026975159433531 15.026975159433531 24.06804392152253 0 0.3807196863200844 2.0 0.6109243748081782 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSG[HS]V 7.9287;5.4588;5.2826 +;-;- + 156 + 1 1.99 47101.7 1.0 2106 5102 7206 HBL1_DMSO_200M_050219_1,7210 HBL1_DMSO_200M_050219_1,7210,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7211 37.979 65.0 895590.0 25 0 145300.0 -1 LDDMNRWL 8 82 360.172036741898 1077.494280825894 3 360.1722595095634 MULTI CID FTMS 0 0 0 7206 864662.625 0.37865556137993 2 -0.1368560791015625 5 Oxidation (M) _LDDM(Oxidation (M))NRWL_ ENSG00000149970|ENST00000379510|CNKSR2;nc|ENSG00000149970|Q8WXI2-2|CNKSR2;nc|ENSG00000149970|Q8WXI2-4|CNKSR2;nc|ENSG00000149970|Q8WXI2-5|CNKSR2 11.640296217721598 0.738950129755968 3 [{I|L}P]VG 4 -1 26.114 0.0 0.0 2.4236 0.0 0.0 0.0 708.2476900690061 708.2476900690061 11.510234424404686 0.0 0.0 0.0 0 0.2302046884880938 1.0 0.0 0.0 [{I|L}P]VG 2.4236 - 22 + 1 1.99 58465.0 1.0 2107 5102 7206 HBL1_DMSO_200M_050219_1,7211 HBL1_DMSO_200M_050219_1,7211,LDDMNRWL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7212 37.981 62.0 1048500.0 25 0 194970.0 + 26802 APPPPPPPP 9 79 433.7420770129379 865.4696010926758 2 433.7420226931572 MULTI CID FTMS 0 0 0 7206 863882.3125 0.6278630850338004 3 -0.1493263244628906 6 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000150275|Q96QU1-2|PCDH15;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000204463|P46379-2|BAG6;ENSG00000005483|ENST00000311117|KMT2E;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000106299|ENST00000223023|WASL;ENSG00000142235|ENST00000600059|LMTK3;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;nc|ENSG00000127481|Q5T4S7-5|UBR4;nc|ENSG00000150275|Q96QU1-6|PCDH15;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000173273|O95271-2|TNKS;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000107758|ENST00000360663|PPP3CB;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000137710|P35241-5|RDX;ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1;nc|ENSG00000168066|Q15637-7|SF1;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;ENSG00000158195|ENST00000618852|WASF2;ENSG00000184937|ENST00000452863|WT1;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000150275|Q96QU1-4|PCDH15;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000204463|P46379|BAG6;nc|ENSG00000005483|Q8IZD2-7|KMT2E;nc|ENSG00000204463|P46379-5|BAG6;ENSG00000168066|ENST00000377390|SF1;ENSG00000165821|ENST00000537235|SALL2;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;nc|ENSG00000182095|O15417-2|TNRC18;nc|ENSG00000171634|Q12830|BPTF;ENSG00000105323|ENST00000392006|HNRNPUL1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;nc|ENSG00000133816|O94851|MICAL2;ENSG00000010017|ENST00000011619|RANBP9;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;nc|ENSG00000185090|Q5VSG8-3|MANEAL;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000150275|Q96QU1|PCDH15;ENSG00000185090|ENST00000373045|MANEAL;ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000107758|P16298-4|PPP3CB;ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000107758|P16298-3|PPP3CB;ENSG00000183307|ENST00000331437|TMEM121B;nc|ENSG00000126464|Q9ULL5-2|PRR12;nc|ENSG00000137710|P35241-2|RDX;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;ENSG00000171634|ENST00000306378|BPTF;ENSG00000204463|ENST00000676615|BAG6;ENSG00000122574|ENST00000242140|WIPF3;nc|ENSG00000107758|P16298-2|PPP3CB;ENSG00000182601|ENST00000331351|HS3ST4;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;ENSG00000184863|ENST00000401878|RBM33;ENSG00000173273|ENST00000310430|TNKS;ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000168066|Q15637-2|SF1;ENSG00000171992|ENST00000307662|SYNPO 56.04830969593885 0.0282699710924866 3 [PA]PPPP[YK] 8 3 + 55.908 0.0 0.0 6.4598 6.4598 91.973 0.0 0.0 0.0 17.44888225674346 6.989700043360188 6.989700043360188 19.20818753952375 0 1.305462187404089 1.6989700043360187 0.0 0.0 [PA]PPPP[YK];{[HG]|PP}APPP[YK];[YK]APP[YK];{[HG]|PP}PAPP[YK];[PA][YK]P[YK];[PA]P[YK][YK];[YK]PAP[YK];{[HG]|PP}PPAP[YK];[YK]PPA[YK];{[HG]|PP}PPPA[YK] 6.4598;4.2404;4.0511;3.9841;3.961;2.9699;2.6612;2.5942;1.6701;1.6031 -;-;-;-;-;-;-;-;-;- 108 1 1.99 57380.4 1.0 2108 5102 7206 HBL1_DMSO_200M_050219_1,7212 HBL1_DMSO_200M_050219_1,7212,PAPPPPPPP False False APPPPPPPP 37.980913 433.742022693157 105480720.0 7206.0 ENSG00000095539|ENST00000210633|SEMA4G;;nc|ENSG00000150275|Q96QU1-2|PCDH15;;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;;nc|ENSG00000184937|P19544-4|WT1;;nc|ENSG00000204463|P46379-2|BAG6;;ENSG00000005483|ENST00000311117|KMT2E;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000106299|ENST00000223023|WASL;;ENSG00000142235|ENST00000600059|LMTK3;;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000150275|Q96QU1-6|PCDH15;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000173273|O95271-2|TNKS;;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;;ENSG00000215474|ENST00000425639|SKOR2;;ENSG00000107758|ENST00000360663|PPP3CB;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;nc|ENSG00000137710|P35241-5|RDX;;ENSG00000105879|ENST00000440859|CBLL1;;nc|ENSG00000105879|Q75N03-2|CBLL1;;nc|ENSG00000168066|Q15637-7|SF1;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;nc|ENSG00000171634|Q12830-4|BPTF;;nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000126464|ENST00000418929|PRR12;;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;;ENSG00000158195|ENST00000618852|WASF2;;ENSG00000184937|ENST00000452863|WT1;;nc|ENSG00000165821|Q9Y467|SALL2;;nc|ENSG00000150275|Q96QU1-4|PCDH15;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000184937|P19544-2|WT1;;nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000005483|Q8IZD2-7|KMT2E;;nc|ENSG00000204463|P46379-5|BAG6;;ENSG00000168066|ENST00000377390|SF1;;ENSG00000165821|ENST00000537235|SALL2;;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;;nc|ENSG00000182095|O15417-2|TNRC18;;nc|ENSG00000171634|Q12830|BPTF;;ENSG00000105323|ENST00000392006|HNRNPUL1;;nc|ENSG00000184937|P19544|WT1;;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;;nc|ENSG00000133816|O94851|MICAL2;;ENSG00000010017|ENST00000011619|RANBP9;;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;;nc|ENSG00000185090|Q5VSG8-3|MANEAL;;nc|ENSG00000184937|P19544-8|WT1;;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;;nc|ENSG00000150275|Q96QU1|PCDH15;;ENSG00000185090|ENST00000373045|MANEAL;;ENSG00000137710|ENST00000645495|RDX;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000107758|P16298-4|PPP3CB;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000005483|Q8IZD2-2|KMT2E;;nc|ENSG00000107758|P16298-3|PPP3CB;;ENSG00000183307|ENST00000331437|TMEM121B;;nc|ENSG00000126464|Q9ULL5-2|PRR12;;nc|ENSG00000137710|P35241-2|RDX;;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;nc|ENSG00000095539|Q9NTN9|SEMA4G;;ENSG00000171634|ENST00000306378|BPTF;;ENSG00000204463|ENST00000676615|BAG6;;ENSG00000122574|ENST00000242140|WIPF3;;nc|ENSG00000107758|P16298-2|PPP3CB;;ENSG00000182601|ENST00000331351|HS3ST4;;nc|ENSG00000184937|P19544-3|WT1;;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;;nc|ENSG00000137710|P35241-4|RDX;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;;ENSG00000184863|ENST00000401878|RBM33;;ENSG00000173273|ENST00000310430|TNKS;;ENSG00000150275|ENST00000644397|PCDH15;;nc|ENSG00000168066|Q15637-2|SF1;;ENSG00000171992|ENST00000307662|SYNPO 1.5355326731999714 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7213 37.983 82.0 739950.0 25 0 56221.0 + 38701 TTRAAPGTTL 10 78 494.7745114077708 987.5344698823416 2 494.7748596072197 MULTI CID FTMS 0 0 0 7206 727884.6875 0.6611997203081788 -2 0.2179946899414062 7 Unmodified _TTRAAPGTTL_ ENSG00000205592|ENST00000454784|MUC19;ENSG00000205592|ENST00000454784|MUC19;nc|ENSG00000205592|Q7Z5P9-2|MUC19;nc|ENSG00000205592|Q7Z5P9-2|MUC19 36.506200033944 0.1944608063770638 3 {[VA]|[{I|L}G]}R[RD]GTT{I|L} 9 5 + 54.619 0.0 0.0 5.5308 5.5308 89.382 0.0 0.0 0.0 10.95901943275102 23.13608784304506 10.95901943275102 22.518119729938 0 0.9247425010840048 1.0969100130080565 1.0 0.0 {[VA]|[{I|L}G]}R[RD]GTT{I|L};[PS]{[NV]|[RG]}{[TV]|[{I|L}S]}GTT{I|L};{[VA]|[{I|L}G]}R[RD]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};[PS]{I|L}HRHE{I|L} 5.5308;3.2506;2.5731;2.2773 -;-;-;- 267 1 1.99 55690.4 1.0 2109 5102 7206 HBL1_DMSO_200M_050219_1,7213 HBL1_DMSO_200M_050219_1,7213,TTRAAPGTTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7214 37.984 68.0 1102600.0 25 0 110880.0 + 44543 YPESNSRAI 9 84 518.7563404603618 1035.4981279875235 2 518.7568237185478 MULTI CID FTMS 0 0 0 7206 702563.0 0.7950588552490326 -5 0.3619003295898437 8 Unmodified _YPESNSRAI_ ENSG00000166037|ENST00000325542|CEP57;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 32.78568957990786 0.1150597335874693 3 YPESN 5 4 59.667 0.0 0.0 5.7622 0.0 0.0 0.0 442.2417086236938 442.2417086236938 48.697887582883936 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 1.274227503252014 0.0 + YPESN 5.7622 + + 52 + 1 1.99 65011.2 1.0 2110 5102 7206 HBL1_DMSO_200M_050219_1,7214 HBL1_DMSO_200M_050219_1,7214,YPESNSRAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7215 37.988 159.0 465110.0 25 0 50054.0 + + 28118 IPPPPPPAM 9 107 466.2462268697885 930.4779008063772 2 466.7493163943291 MULTI CID FTMS 0 0 0 7206 420860.03125 0.0978280940317452 31 -1.9098014831542969 9 Unmodified _PPPAPPPSAT_ ENST00000468653.5_1_3:160117521-160130242:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4 24.67388899826682 0.4143206957119831 3 PPPPPA{M(Oxidation (M))|F} 7 -1 33.409 0.0 0.0 3.5905 0.0 0.0 209.13581203860207 0.0 209.13581203860207 0.0 -5.720967679505193 -5.720967679505193 0.0 0 0.0 0.0 0.0 0.0 PPPPPA{M(Oxidation (M))|F} 3.5905 - 699 + 1 1.99 60397.6 1.0 2111 5102 7206 HBL1_DMSO_200M_050219_1,7215 HBL1_DMSO_200M_050219_1,7215,PPPAPPPSAT False False IPPPPPPAM 37.987523 466.749316394329 95557816.0 7206.0 ENST00000468653.5_1_3:160117521-160130242:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 6.9546324412028 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7216 37.99 117.0 648200.0 25 0 71617.0 + 26298 NQVTEKRA 8 102 473.2589306064832 0 473.2579833865166 PEAK CID FTMS 0 0 0 7206 332651.84375 0.501472355528588 6 -0.3727035522460937 10 Unmodified _NQVTEKRA_ REV__ENSG00000105248|ENST00000262962|YJU2 9.347437153973935 0.5488964601725408 3 {I|L}G 2 -1 9.464 0.0 0.0 1.002 0.0 0.0 213.1903943166788 558.1811007135374 771.3714950302162 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}G 1.002 - 9 + 1 1.99 63355.8 1.0 2112 5102 7206 HBL1_DMSO_200M_050219_1,7216 HBL1_DMSO_200M_050219_1,7216,NQVTEKRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7217 37.993 128.0 672200.0 25 0 57267.0 12673 GVLNIDDYKI 10 80 383.8764091938659 1148.607398181798 3 383.8760253787041 MULTI CID FTMS 0 0 0 7206 326030.59375 0.5945066291639908 -4 0.3038520812988281 11 Unmodified _GVLNIDDYKI_ ENSG00000152822|ENST00000282753|GRM1;nc|ENSG00000152822|Q13255-2|GRM1;nc|ENSG00000152822|Q13255-3|GRM1 7.289230182591677 0.6929195370588109 3 {I|L}K[W{I|L}]T 5 8 16.198 0.0 0.0 1.4102 0.0 0.0 97.97636181023276 406.2209481443776 504.1973099546104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 {I|L}K[W{I|L}]T 1.4102 - 32 + 1 1.99 77097.5 1.0 2113 5102 7206 HBL1_DMSO_200M_050219_1,7217 HBL1_DMSO_200M_050219_1,7217,GVLNIDDYKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7218 37.997 222.0 710860.0 25 0 66445.0 + 44863 YPPHVQKV 8 152 323.1837477176532 966.5294137531596 3 323.1833679080009 MULTI CID FTMS 0 0 0 7206 283603.21875 0.3970248932202749 63 -3.58740234375 12 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 16.942295170755138 0.6606234159769251 3 YPPH{[QV]|[N{I|L}]|[RA]|[KV]}KV 8 0 + 44.493 0.0 0.0 4.6034 4.6034 74.133 0.0 0.0 0.0 28.62826806974688 1.80845970263718 1.80845970263718 1.80845970263718 0 0.0 1.2218487496163564 0.0 0.1462566630072955 + + YPPH{[QV]|[N{I|L}]|[RA]|[KV]}KV;YPPH{[QV]|[N{I|L}]|[RA]|[KV]}VK;YPPV[HQ]KV;YPPV[HQ]VK;YPVP[HQ]KV;YPVP[HQ]VK;YPPV[HK]QV;YPPHKK[TP];YPVP[HK]QV;YPPV[HK]AGV 4.6034;4.4163;4.3739;4.1868;3.8802;3.6931;3.2609;2.8235;2.7673;2.3087 +;-;-;-;-;-;-;-;-;- + 199 + 1 1.99 124874.2 1.0 2114 5102 7206 HBL1_DMSO_200M_050219_1,7218 HBL1_DMSO_200M_050219_1,7218,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7219 38.0 149.0 363550.0 25 0 31440.0 6593 EAPPNTHSI 9 83 483.2375732379608 964.4605935427217 2 483.2382690310478 MULTI CID FTMS 0 0 0 7206 280268.40625 0.626755488467492 4 -0.2427215576171875 13 Unmodified _EAPPNTHSI_ ENSG00000163378|ENST00000383701|EOGT;nc|ENSG00000163378|Q5NDL2-2|EOGT;nc|ENSG00000163378|Q5NDL2-3|EOGT 29.081581746732265 0.1611639662936252 3 [TA]T{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[SA]|[TG]}E{I|L} 9 6 [TA]T{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[SA]|[TG]}E + + 18.979 -6.1653 -0.73981 1.9679 1.9679 48.813 0.0 0.0 0.0 0.0 0.3959062302381255 0.0 0.0 0 0.5 0.0 0.0 0.0 [TA]T{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[SA]|[TG]}E{I|L} 1.9679 - 80 + 1 1.99 48554.6 1.0 2115 5102 7206 HBL1_DMSO_200M_050219_1,7219 HBL1_DMSO_200M_050219_1,7219,EAPPNTHSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7220 38.003 194.0 449670.0 25 0 67863.0 34651 SPPPPPPPP 9 110 441.73979431227787 881.4650356913558 2 441.7398254275322 MULTI CID FTMS 0 0 0 7206 271110.125 0.2497637248321027 14 -1.216960906982422 14 Unmodified _SPPPPPPPP_ ENSG00000099999|ENST00000382363|RNF215;ENSG00000100312|ENST00000216139|ACR;ENSG00000103479|ENST00000262133|RBL2;ENSG00000107816|ENST00000454422|LZTS2;ENSG00000109920|ENST00000263773|FNBP4;ENSG00000120549|ENST00000376454|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;ENSG00000136754|ENST00000376140|ABI1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000164944|ENST00000297591|VIRMA;ENSG00000184863|ENST00000401878|RBM33;ENSG00000260428|ENST00000567180|SCX;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;nc|ENSG00000109920|Q8N3X1-2|FNBP4;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000015285|ENST00000376701|WAS;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000100201|ENST00000403230|DDX17;REV__ENSG00000107816|ENST00000454422|LZTS2;REV__ENSG00000112541|ENST00000539869|PDE10A;REV__ENSG00000127666|ENST00000248244|TICAM1;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENSG00000141867|ENST00000679869|BRD4;REV__ENSG00000143006|ENST00000371445|DMRTB1;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000204334|ENST00000697325|ERICH2;REV__ENSG00000242265|ENST00000612748|PEG10;REV__ENST00000216019.11_1_22:38881942-38884127:-|nuORF;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF;REV__ENST00000361272.8_2_8:17102747-17104366:-|nuORF;REV__ENST00000431312.2_1_22:38881942-38884127:-|nuORF;REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF;REV__ENST00000482108.1_2_7:94293788-94294991:+|nuORF;REV__ENST00000508096.1_1_10:126605730-126631034:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100201|Q92841-1|DDX17;REV__nc|ENSG00000100201|Q92841-2|DDX17;REV__nc|ENSG00000100201|Q92841-3|DDX17;REV__nc|ENSG00000139218|Q99590-2|SCAF11;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000168066|Q15637-5|SF1;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 81.86404211737425 0.017065112157077 3 [PS]PPPP[YK] 8 3 + 63.028 0.0 0.0 7.1503 7.1503 94.038 0.0 0.0 0.0 17.65916793966631 50.26360413483761 17.65916793966631 20.39455593186148 0 1.1549471895720984 1.6989700043360187 1.464559192431053 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[PS][YK]P[YK];[PS]P[YK][YK];{[NV]|[RG]}[YV]P[YK];[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[YK];{[HG]|PP}S[YK][YK];{[HG]|PP}[YK]S[YK] 7.1503;4.8366;4.614;3.0935;1.1579;1.1035;0.77983;0.31054 -;-;-;-;-;-;-;- 244 1 1.99 70875.8 1.0 2116 5102 7206 HBL1_DMSO_200M_050219_1,7220 HBL1_DMSO_200M_050219_1,7220,SPPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7221 38.017 800.0 180450.0 25 0 28221.0 + 18141 KTMETAEKL 9 153 525.779511150181 1049.5444693671618 2 525.7786132693291 MULTI CID FTMS 0 0 0 7206 220121.125 1.0 0 0.0 15 Unmodified _KTMETAEKL_ ENSG00000064607|ENST00000452918|SUGP2;ENST00000598240.1_1_19:19105804-19136912:-|nuORF;nc|ENSG00000064607|Q8IX01-3|SUGP2;nc|ENSG00000064607|Q8IX01-4|SUGP2 94.90867108109512 0.0129882248954091 3 KTMETAEK{I|L} 9 0 + 81.526 0.0 0.0 7.7677 7.7677 83.339 0.0 0.0 0.0 16.478174818886373 1.6184574252865502 1.6184574252865502 1.6184574252865502 0 2.4634679910804405 0.0 1.0356668758921828 0.2614393726401688 + + KTMETAEK{I|L};KTMETAE{I|L}K;[YQ][W{I|L}]AE{I|L}K;[YQ][W{I|L}]AEK{I|L};[MT]EATKE{I|L}K;[MT]EATKEK{I|L};[MT]EKTAE{I|L}K;[MT]EKTAEK{I|L};[{M(Oxidation (M))|F}V]DATKE{I|L}K;KTMV[W{I|L}]C(Carbamidomethyl (C)){I|L} 7.7677;7.6135;4.9853;4.938;4.7481;4.7008;4.6114;4.564;4.1556;4.1347 +;-;-;-;-;-;-;-;-;- + 2218 + 1 1.99 114487.4 0.959999978542328 2117 5102 7206 HBL1_DMSO_200M_050219_1,7221 HBL1_DMSO_200M_050219_1,7221,KTMETAEKL True True KTMETAEKL 38.017265 525.778613269329 1150296.875 7206.0 ENST00000598240.1_1_19:19105804-19136912:-|nuORF;;ENSG00000064607|ENST00000452918|SUGP2;;nc|ENSG00000064607|Q8IX01-4|SUGP2;;nc|ENSG00000064607|Q8IX01-3|SUGP2 5.913740158081055 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7222 38.023 314.0 244030.0 25 0 28704.0 + 39161 TYPEESRSY 9 76 566.2509764518932 1130.4873999705862 2 566.2499877810478 MULTI CID FTMS 0 0 0 7206 194610.1875 0.0451731106163323 14 -1.216960906982422 16 Unmodified _TYPEESRSY_ ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13 32.78568957990786 0.1150597335874693 3 [YT]PEERSSY 9 2 + 70.072 0.0 0.0 6.1984 6.1984 86.016 0.0 0.0 0.0 6.989700043360188 6.989700043360188 6.989700043360188 6.989700043360188 0 0.3494850021680094 2.0 0.8494850021680094 0.0 [YT]PEERSSY;[EP]EREEP[{M(Oxidation (M))|F}V];[EP]E[VG]EEP[{M(Oxidation (M))|F}V];[YT][WD][{I|L}P]SSY;[EP]ER[HC]PTY;[EP]E[{I|L}P][WD][{M(Oxidation (M))|F}V];[EP]E[VG]E[HA]TY 6.1984;5.5801;4.7656;3.0419;2.7317;2.4236;2.1834 -;-;-;-;-;-;- 146 + 1 1.99 66598.1 1.0 2118 5102 7206 HBL1_DMSO_200M_050219_1,7222 HBL1_DMSO_200M_050219_1,7222,TYPEESRSY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7223 38.037 800.0 232940.0 25 0 11724.0 + 5880 DPYKHKVNI 9 189 557.306021857312 1112.597490781424 2 557.3069335818291 MULTI CID FTMS 0 0 0 7206 152966.859375 0.1028612097451515 6 -0.3727035522460937 17 Unmodified _DPYKHKVNI_ ENSG00000198793|ENST00000361445|MTOR 122.17920374332846 0.0007092405233684 3 DPYKHKV{I|L}N 9 2 + 96.707 0.0 0.0 8.692 8.692 82.435 0.0 0.0 0.0 7.8916947833514115 0.2726570743408985 0.2726570743408985 0.2726570743408985 0 2.353917193908117 1.3979400086720375 0.0 1.5858317385287874 DPYKHKV{I|L}N;DPYKHKVN{I|L};D{I|L}{M(Oxidation (M))|F}KHKV{I|L}N;D{I|L}{M(Oxidation (M))|F}KHKVN{I|L};DPYKHKVQV;D{I|L}{M(Oxidation (M))|F}KHKVQV;DPYKHKVVQ;D{I|L}{M(Oxidation (M))|F}KHKVVQ;{I|L}D{M(Oxidation (M))|F}KHKV{I|L}N;{I|L}D{M(Oxidation (M))|F}KHKVN{I|L} 8.692;8.6675;8.5456;8.5211;8.3098;8.1634;8.1363;7.9899;7.9827;7.9582 -;+;-;-;-;-;-;-;-;- + 2822 + 1 1.99 143796.7 0.8299999833106995 2119 5102 7206 HBL1_DMSO_200M_050219_1,7223 HBL1_DMSO_200M_050219_1,7223,DPYKHKVNI True True DPYKHKVNI 38.036831 557.306933581829 17642526.0 7206.0 ENSG00000198793|ENST00000361445|MTOR 7.559672832489014 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7224 38.051 800.0 132660.0 25 0 7934.3 39586 VCWWRYWWHYP 11 129 561.2571611400897 1680.7496540204688 3 561.2582275271416 MULTI CID FTMS 0 0 0 7206 128546.296875 0.9144056042300924 -1 0.0963783264160156 18 Unmodified _VCWWRYWWHYP_ ENST00000410111.7_1_2:86406577-86422494:-|nuORF 0.0948413911109767 0.8747004676205551 3 {M(Oxidation (M))|F}WG{[VA]|[{I|L}G]}{I|L}C(Carbamidomethyl (C))MWWTN 12 11 49.115 0.0 0.0 2.9222 0.0 0.0 0.0 126.0353487604125 126.0353487604125 15.552776650969465 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.7614393726401688 0.0 {M(Oxidation (M))|F}WG{[VA]|[{I|L}G]}{I|L}C(Carbamidomethyl (C))MWWTN 2.9222 - 758 + 1 1.99 85542.0 0.75 2120 5102 7206 HBL1_DMSO_200M_050219_1,7224 HBL1_DMSO_200M_050219_1,7224,VCWWRYWWHYP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7226 38.055 17.0 2335900.0 25 0 421780.0 + 36379 SYQESTKQL 9 67 542.2694352689783 1082.5243176047566 2 542.2697631716728 MULTI CID FTMS 0 0 0 7225 3031022.5 0.3393454275698256 2 -0.0684127807617187 1 Unmodified _SYQESTKQL_ ENSG00000124422|ENST00000261497|USP22;ENSG00000247746|ENST00000500968|USP51;ENSG00000273820|ENST00000621775|USP27X;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22 49.55428908609986 0.0413471690215031 3 {[{M(Oxidation (M))|F}C]|[YS]}QE{[MG]|[TS]}KQ{I|L} 9 0 + 43.029 0.0 0.0 3.9749 3.9749 79.526 0.0 0.0 0.0 16.732712163289282 10.365612383257393 10.365612383257393 7.96983721748952 0 1.1989700043360187 0.0 0.5 0.75 + + {[{M(Oxidation (M))|F}C]|[YS]}QE{[MG]|[TS]}KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QE[RK]C(Carbamidomethyl (C)){I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]E{[MG]|[TS]}KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QE{[MG]|[TS]}K[AG]{I|L};[YQ][RK]EQ[MT];{[{M(Oxidation (M))|F}C]|[YS]}Q[WM]KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QE[RK][CG]{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]E[RK]C(Carbamidomethyl (C)){I|L};[HM][Q{I|L}]EQGQ{I|L};[YQ][RK]E[AG][MT] 3.9749;3.2387;3.1243;2.8238;2.6189;2.5918;2.3831;2.3831;2.1274;1.7633 +;-;-;-;-;-;-;-;-;- + 208 + 1 1.99 33361.3 1.0 2121 5103 7225 HBL1_DMSO_200M_050219_1,7226 HBL1_DMSO_200M_050219_1,7226,SYQESTKQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7227 38.056 13.0 4292000.0 25 0 845490.0 + 12536 GVGPVPARA 9 55 412.2428960572857 822.4712391813714 2 412.2427551150322 MULTI CID FTMS 0 0 0 7225 4529207.0 0.6913153302432894 1 -0.0559425354003906 2 Unmodified _GVGPVPARA_ ENSG00000129636|ENST00000320640|ITFG1 28.486842064014134 0.1687311288560894 3 [VG]GPVA 6 3 51.956 0.0 0.0 6.317 0.0 0.0 0.0 339.17939172916255 339.17939172916255 26.549471895720984 0.0 0.0 0.0 0 0.6549471895720984 2.0 0.0 0.0 [VG]GPVA 6.317 - 120 + 1 1.99 50116.1 1.0 2122 5103 7225 HBL1_DMSO_200M_050219_1,7227 HBL1_DMSO_200M_050219_1,7227,GVGPVPARA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7228 38.057 30.0 5354500.0 25 0 573480.0 -1 0 54 624.7862646997731 2495.1159529326924 4 625.0375244021416 MULTI CID FTMS 0 0 0 7225 3255246.0 1.0 0 0.0 3 3 [RD]W[RD]D 6 -1 29.736 0.0 0.0 1.1918 0.0 0.0 0.0 1648.7271284585108 1648.7271284585108 18.938937347570075 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.3252574989159953 [RD]W[RD]D 1.1918 - 22 1 1.99 123302.7 1.0 2123 5103 7225 HBL1_DMSO_200M_050219_1,7228 HBL1_DMSO_200M_050219_1,7228, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7229 38.059 20.0 3217000.0 25 0 392300.0 + 21977 LPPPAAKTV 9 84 447.2760150369352 892.5374771406705 2 447.2762023806572 MULTI CID FTMS 0 0 0 7225 2975558.25 0.4554729386560145 -6 0.4428138732910156 4 Unmodified _LPPPAAKTV_ ENSG00000168894|ENST00000306368|RNF181;ENST00000461845.1_1_2:85822886-85823939:+|nuORF 34.40172386719151 0.1061884637610825 3 {I|L}PP 3 6 53.698 0.0 0.0 6.0163 0.0 0.0 0.0 582.3255691974637 582.3255691974637 42.86043214641512 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 + {I|L}PP 6.0163 + + 136 + 1 1.99 55411.7 1.0 2124 5103 7225 HBL1_DMSO_200M_050219_1,7229 HBL1_DMSO_200M_050219_1,7229,LPPPAAKTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7230 38.06 23.0 5955700.0 25 0 552060.0 -1 0 66 500.0304063829482 2495.115649581741 5 500.2317993044853 MULTI CID FTMS 0 0 0 7225 2817733.75 1.0 0 0.0 5 3 D 1 -1 14.732 0.0 0.0 0.59043 0.0 0.0 843.3637794547043 1533.6965157272025 2377.0602951819064 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 D 0.59043 - 60 + 1 1.99 112173.0 1.0 2125 5103 7225 HBL1_DMSO_200M_050219_1,7230 HBL1_DMSO_200M_050219_1,7230, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7231 38.061 61.0 908340.0 25 0 80331.0 + 32133 RVPETVADA 9 96 479.25343778994335 956.4923226466868 2 479.2535888552666 MULTI CID FTMS 0 0 0 7225 1019121.0 0.5635280297025296 -3 0.2989082336425781 6 Unmodified _RVPETVADA_ ENSG00000137714|ENST00000260270|FDX1;ENST00000449115.1_1_20:33063731-33063836:-|nuORF 38.17557092003332 0.0854718145212029 3 TVAW 4 6 43.047 0.0 0.0 4.5006 0.0 0.0 481.26469618965 0.0 481.26469618965 0.0 21.620768972555595 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 TVAW 4.5006 - 48 1 1.99 50832.1 1.0 2126 5103 7225 HBL1_DMSO_200M_050219_1,7231 HBL1_DMSO_200M_050219_1,7231,RVPETVADA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7232 38.063 52.0 1105000.0 25 0 132400.0 + 29672 QPATPTRTI 9 76 492.77735813345873 983.5401633337176 2 492.7773925662041 MULTI CID FTMS 0 0 0 7225 848083.8125 0.3838462904107654 2 -0.0684127807617187 7 Unmodified _QPATPTRTI_ ENSG00000143190|ENST00000367866|POU2F1;nc|ENSG00000143190|P14859-2|POU2F1;nc|ENSG00000143190|P14859-3|POU2F1;nc|ENSG00000143190|P14859-4|POU2F1;nc|ENSG00000143190|P14859-5|POU2F1;nc|ENSG00000143190|P14859|POU2F1 12.240655878213236 0.5053430591993562 3 [QP]AT{I|L} 5 4 22.24 0.0 0.0 2.2613 0.0 0.0 0.0 470.24021326236567 470.24021326236567 11.738525483924496 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 [QP]AT{I|L} 2.2613 - 49 + 1 1.99 49749.1 1.0 2127 5103 7225 HBL1_DMSO_200M_050219_1,7232 HBL1_DMSO_200M_050219_1,7232,QPATPTRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7233 38.065 121.0 573120.0 25 0 51441.0 + 4862 DGAPPSNQI 9 102 449.71701227957 897.41947162594 2 449.7166931033134 MULTI CID FTMS 0 0 0 7225 341403.28125 0.4528729848738693 15 -1.3372917175292969 8 Unmodified _DGAPPSNQI_ ENSG00000112245|ENST00000626021|PTP4A1 30.63653989081413 0.1413794767160703 3 [DG]AP 4 5 34.341 0.0 0.0 3.8266 0.0 0.0 0.0 554.2583442668181 554.2583442668181 13.59597773587804 0.0 0.0 0.0 0 0.805462187404089 1.154901959985743 0.3054621874040891 0.0 + [DG]AP 3.8266 + + 237 1 1.99 57160.6 1.0 2128 5103 7225 HBL1_DMSO_200M_050219_1,7233 HBL1_DMSO_200M_050219_1,7233,DGAPPSNQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7234 38.079 800.0 206500.0 25 0 16618.0 + -1 TTPKALGKMK 10 137 545.8175715518128 1089.6205901704254 2 545.8179199099541 MULTI CID FTMS 0 0 0 7225 195765.703125 0.3833700332961744 -5 0.384765625 9 Oxidation (M) _TTPKALGKM(Oxidation (M))K_ REV__ENSG00000074590|ENST00000261402|NUAK1 8.155526934196011 0.6889124077178598 3 PK{[RE]|[WV]}T{M(Oxidation (M))|F}K 7 -1 19.158 0.0 0.0 1.7582 0.0 0.0 185.1442382410665 0.0 185.1442382410665 0.0 -0.266738650829101 -0.266738650829101 0.0 0 0.0 0.0 0.0 0.6462566630072955 PK{[RE]|[WV]}T{M(Oxidation (M))|F}K 1.7582 - 491 + 1 1.99 128354.1 0.8999999761581421 2129 5103 7225 HBL1_DMSO_200M_050219_1,7234 HBL1_DMSO_200M_050219_1,7234,TTPKALGKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7235 38.093 800.0 200150.0 25 0 17630.0 + 22138 LPPQQQQRI 9 172 554.316451418148 1106.6183499030958 2 554.3166381716728 MULTI CID FTMS 0 0 0 7225 187068.109375 0.8658253254847305 -4 0.3189582824707031 10 Unmodified _LPPQQQQRI_ ENSG00000109606|ENST00000336812|DHX15;ENST00000336812.4_1_4:24550520-24550565:-|nuORF 39.957323273325 0.0756908302845263 3 {I|L}PPQQQR{I|L}Q 9 2 + 65.268 0.0 0.0 5.8979 5.8979 77.322 0.0 0.0 0.0 29.202566285843048 1.123967263808936 1.123967263808936 1.123967263808936 0 0.4247425010840047 2.0 0.0 0.9685808974044168 {I|L}PPQQQR{I|L}Q;{I|L}PPQQQRQ{I|L};{I|L}PPQ[AG]QR{I|L}Q;{I|L}PP[AG]QQR{I|L}Q;{I|L}PPQQ[AG]R{I|L}Q;{I|L}PPQQ[AG]RQ{I|L};{I|L}PP[AG]QQRQ{I|L};{I|L}PPQ[AG]QRQ{I|L};{I|L}PPQQQR[AG]{I|L};{I|L}PP[AG]Q[AG]R{I|L}Q 5.8979;5.7964;5.0658;5.0658;5.0658;4.9643;4.9643;4.9643;4.6882;4.2377 -;-;-;-;-;-;-;-;-;- 837 + 1 1.99 124747.4 0.8999999761581421 2130 5103 7225 HBL1_DMSO_200M_050219_1,7235 HBL1_DMSO_200M_050219_1,7235,LPPQQQQRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7236 38.107 800.0 233400.0 25 0 33155.0 + 22214 LPRARRRE 8 181 527.3243399109177 1052.6341268886354 2 527.3248168826103 MULTI CID FTMS 0 0 0 7225 163696.46875 0.9404971542452916 -2 0.1772918701171875 11 Unmodified _LPRARRRE_ REV__ENST00000358201.8_2_16:28936491-28936821:-|nuORF 4.75600775471527 0.7954636275367004 3 KPT 3 -1 20.445 0.0 0.0 1.9423 0.0 0.0 56.06156232832479 667.3533419244749 723.4149042527997 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 KPT 1.9423 - 500 + 1 1.99 145720.4 0.8100000023841858 2131 5103 7225 HBL1_DMSO_200M_050219_1,7236 HBL1_DMSO_200M_050219_1,7236,LPRARRRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7238 38.111 40.0 1436200.0 25 0 155830.0 + 44711 YPHDPPKV 8 70 476.748106647566 951.481660361932 2 476.7481872439384 MULTI CID FTMS 0 0 0 7237 1373687.875 0.3886559048555609 -3 0.2332344055175781 1 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 54.773552608820026 0.1167943196628344 3 YPHDPPKV 8 0 + 58.617 0.0 0.0 6.1606 6.1606 88.947 0.0 0.0 0.0 17.54751704299443 9.341827155103571 9.341827155103571 9.341827155103571 0 1.5074908058443608 1.3979400086720375 0.0 0.0 + + YPHDPPKV;YPHDPV[KP];YPWYPKV;YPHDVP[KP];YPWYV[KP];YWYPPKV;YPV{[NV]|[RG]}{[{M(Oxidation (M))|F}D]|MM}V;YPV[HD]P[KP];YPV[WY][KP];YPRR{[{M(Oxidation (M))|F}D]|MM}V 6.1606;5.1788;5.0197;4.522;4.0379;3.8979;3.4937;3.4502;3.4093;3.1364 +;-;-;-;-;-;-;-;-;- + 231 + 1 1.99 48468.7 1.0 2132 5104 7237 HBL1_DMSO_200M_050219_1,7238 HBL1_DMSO_200M_050219_1,7238,YPHDPPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7239 38.119 454.0 170010.0 25 0 12222.0 + 2162 AQAELQQHDV 10 111 569.7778944031238 1137.5412358730475 2 569.7787353396416 MULTI CID FTMS 0 0 0 7237 138558.078125 0.5562691266741377 -1 0.0559425354003906 2 Unmodified _AQAELQQHDV_ ENSG00000169710|ENST00000306749|FASN 83.42873516780209 0.014257832770272 3 [QA]AE[HA]VDVQA 11 6 + 64.486 0.0 0.0 5.6689 5.6689 83.667 0.0 0.0 0.0 5.940706517345092 30.435242810148274 5.940706517345092 6.462400633988466 0 1.424742501084005 0.9208187539523752 0.0 0.75 [QA]AE[HA]VDVQA;[QA]AE[EP]{I|L}[Y{M(Oxidation (M))|F}]A;[QA]AE[HA]VDV[AG]A;[QA]AS[HM]{I|L}[Y{M(Oxidation (M))|F}]A;[QA]AE[HA]{[QN]|[E{I|L}]|[KN]}AQA;[RN]E{I|L}QQ[HD]V;[QA]AS[HN]{[NV]|[RG]}VQA;[QA]AE[EP][HT][KQ];[QA]{[QN]|[E{I|L}]|[KN]}[HQ]DVQA;[HD]QVQVDVQA 5.6689;5.1008;4.8665;4.8362;4.1304;4.0639;3.7734;3.6274;3.5462;3.5278 -;-;-;-;-;-;-;-;-;- 1271 1 1.99 62977.7 1.0 2133 5104 7237 HBL1_DMSO_200M_050219_1,7239 HBL1_DMSO_200M_050219_1,7239,AQAELQQHDV True True AQAELQQHDV 38.119112 569.778735339642 1929296.25 7237.0 ENSG00000169710|ENST00000306749|FASN 7.9467423756917315 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7241 38.134 745.0 166030.0 25 0 7413.7 + 24730 MPDSDSASSDV 11 186 555.7158574289972 1109.4171619247943 2 555.7157470583916 MULTI CID FTMS 0 0 0 7240 178406.203125 0.687288848834817 1 -0.0933952331542968 1 Unmodified _MPDSDSASSDV_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 9.38312468134398 0.8308777417566128 3 MP 2 -1 33.443 0.0 0.0 3.0145 0.0 0.0 0.0 878.3068331354124 878.3068331354124 14.190840781556204 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 MP 3.0145 + + 1474 + 1 1.99 103731.1 1.0 2134 5105 7240 HBL1_DMSO_200M_050219_1,7241 HBL1_DMSO_200M_050219_1,7241,MPDSDSASSDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7242 38.135 33.0 2326900.0 25 0 229290.0 + 38131 TPMGPGRTV 9 93 458.2390040031423 914.4634550730846 2 458.2393981814384 MULTI CID FTMS 0 0 0 7240 1839217.0 0.1780100572042691 -3 0.1493263244628906 2 Unmodified _TPMGPGRTV_ ENSG00000116977|ENST00000366584|LGALS8;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;nc|ENSG00000116977|O00214-2|LGALS8 31.26834338654808 0.1333407332142048 3 TPMG 4 5 63.245 0.0 0.0 6.9161 0.0 0.0 0.0 525.2795980211806 525.2795980211806 50.76143041865549 0.0 0.0 0.0 0 1.1307196863200843 2.0 0.0 0.0 + TPMG 6.9161 + + 123 + 1 1.99 63819.7 1.0 2135 5105 7240 HBL1_DMSO_200M_050219_1,7242 HBL1_DMSO_200M_050219_1,7242,TPMGPGRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7243 38.142 363.0 304570.0 25 0 25351.0 + 6667 EAYLGKKV 8 130 454.26483706636657 906.5151211995332 2 454.2656127810478 MULTI CID FTMS 0 0 0 7240 200567.84375 0.2040291601972793 8 -0.7370681762695312 3 Unmodified _EAYLGKKV_ ENSG00000044574|ENST00000324460|HSPA5 54.773552608820026 0.1167943196628344 3 {[CP]|[EA]}Y{I|L}GKKV 8 0 + 39.261 0.0 0.0 4.331 4.331 85.266 0.0 0.0 0.0 18.626465475506684 11.638568026386691 11.638568026386691 22.050692283728743 0 0.805462187404089 0.0 0.0 0.1643943297944484 + + {[CP]|[EA]}Y{I|L}GKKV;[KG]K{I|L}Y{[CP]|[EA]}V;KKG{I|L}Y{[CP]|[EA]}V;[KG]{I|L}KY{[CP]|[EA]}V 4.331;1.8985;1.2761;1.2344 +;-;-;- + 186 + 1 1.99 87121.3 1.0 2136 5105 7240 HBL1_DMSO_200M_050219_1,7243 HBL1_DMSO_200M_050219_1,7243,EAYLGKKV True True EAYLGKKV 38.141943 454.265612781048 13564605.0 7240.0 ENSG00000044574|ENST00000324460|HSPA5 6.145635922749837 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7244 38.156 800.0 90457.0 25 0 6623.9 + 7253 EESNYELEGK 10 120 599.2667989770152 1196.5190450208304 2 599.2674438357353 MULTI CID FTMS 0 0 0 7240 148818.296875 0.3941069241111381 7 -0.6018638610839844 4 Unmodified _EESNYELEGK_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 35.61225514009592 0.2039006631696762 3 EESNYE{I|L}EGK 10 0 + 70.58 0.0 0.0 5.8988 5.8988 86.812 0.0 0.0 0.0 54.95402560952813 10.991822159605904 10.991822159605904 9.164539485499247 0 0.3494850021680094 1.5228787452803376 0.75 0.1203715150305281 + + EESNYE{I|L}EGK;EESGGYE{I|L}EGK;EESNYE{I|L}[KG]E;EESGGYE{I|L}[KG]E;[WK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YNS[HC];[WK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YGGS[HC];[WK]{[RE]|[WV]}[HD]S[HC];[WK][HA]{[QS]|[NT]}NS[HC] 5.8988;5.1329;4.5005;3.7346;1.5325;0.76292;0.67865;0.55398 +;-;-;-;-;-;-;- + 219 + 1 1.99 56109.6 0.800000011920929 2137 5105 7240 HBL1_DMSO_200M_050219_1,7244 HBL1_DMSO_200M_050219_1,7244,EESNYELEGK False True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 7245 38.17 800.0 216120.0 25 0 12269.0 -1 STCLVCPQDTF 11 138 635.7759483158609 1269.5373436985217 2 635.7767822146416 MULTI CID FTMS 0 0 0 7240 144053.265625 0.2010007645495292 -2 0.0684127807617187 5 Carbamidomethyl (C) _STC(Carbamidomethyl (C))LVCPQDTF_ ENSG00000215788|ENST00000356876|TNFRSF25;ENST00000469691.5_1_1:6522722-6525298:-|nuORF;ENST00000513135.5_1_1:6524426-6525611:-|nuORF;nc|ENSG00000215788|Q93038-10|TNFRSF25;nc|ENSG00000215788|Q93038-11|TNFRSF25;nc|ENSG00000215788|Q93038-12|TNFRSF25;nc|ENSG00000215788|Q93038-2|TNFRSF25;nc|ENSG00000215788|Q93038-3|TNFRSF25;nc|ENSG00000215788|Q93038-4|TNFRSF25;nc|ENSG00000215788|Q93038-5|TNFRSF25 20.41453444215458 0.6105011870913812 3 [NP]HDEAQQNA{M(Oxidation (M))|F} 11 -1 + 95.38 0.0 0.0 7.513 7.513 91.401 0.0 0.0 0.0 10.064599707766178 50.94383073521058 10.064599707766178 9.128498242811006 0 0.9247425010840048 0.721246399047171 0.9476212463643424 0.7742275032520141 [NP]HDEAQQNA{M(Oxidation (M))|F};[NP]HDEA[AG]QNA{M(Oxidation (M))|F};[NP]HDEAQ[AG]NA{M(Oxidation (M))|F};[NP]HDEAQQGGA{M(Oxidation (M))|F};[HD][NP]EAQQNA{M(Oxidation (M))|F};[AG]D[WY]AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GAEWYQNA{M(Oxidation (M))|F};[NP]HDEA[AG][AG]NA{M(Oxidation (M))|F};[NP]HDEA[AG]QGGA{M(Oxidation (M))|F};[NP]HDEAQ[AG]GGA{M(Oxidation (M))|F} 7.513;6.7939;6.7939;6.7939;6.6674;6.2832;6.2008;6.0773;6.0773;6.0773 -;-;-;-;-;-;-;-;-;- 8662 1 1.99 128281.4 0.7799999713897705 2138 5105 7240 HBL1_DMSO_200M_050219_1,7245 HBL1_DMSO_200M_050219_1,7245,STCLVCPQDTF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7246 38.183 800.0 199940.0 25 0 38419.0 15081 IMLCNIRISS 10 126 575.3105638517912 1148.6065747703824 2 575.3099853396416 MULTI CID FTMS 0 0 0 7240 135031.71875 0.8695028809100108 -1 0.0124702453613281 6 Unmodified _IMLCNIRISS_ ENST00000407073.5_2_2:149216187-149216292:+|nuORF 13.90604991867851 0.6142120002215601 3 {I|L} 1 9 12.343 0.0 0.0 1.0746 0.0 0.0 1017.511907267256 0.0 1017.511907267256 0.0 1.7474250108400469 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + {I|L} 1.0746 + + 178 + 1 1.99 122339.1 0.7699999809265137 2139 5105 7240 HBL1_DMSO_200M_050219_1,7246 HBL1_DMSO_200M_050219_1,7246,IMLCNIRISS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7247 38.197 800.0 158540.0 25 0 10402.0 + 35079 SQVEGEHQL 9 177 513.7464711214938 1025.4783893097874 2 513.7462646365166 MULTI CID FTMS 0 0 0 7240 126766.7109375 1.0 0 0.0 7 Unmodified _SQVEGEHQL_ ENSG00000117724|ENST00000366955|CENPF 19.361941925380144 0.3125782356748823 3 {[QS]|[NT]}VES{[QS]|[NT]}YV 9 5 + 31.039 0.0 0.0 3.0268 3.0268 69.866 0.0 0.0 0.0 6.8042308076369125 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 1.2134679910804405 0.0 0.3252574989159953 0.0 {[QS]|[NT]}VES{[QS]|[NT]}YV;{[QS]|[NT]}VES{[QS]|[NT]}VY;[{I|L}A]G[DP]EYYV;[{I|L}A][EP][DG]YYV;{[QS]|[NT]}VEEG[Q{I|L}]H;{[QS]|[NT]}VEEG[H{I|L}]Q;[DP][Q{I|L}]EYYV;{[QS]|[NT]}VEEG[HQ]{I|L};{[QS]|[NT]}VE[DG][KT]Y;{[QS]|[NT]}VEW[Q{I|L}]H 3.0268;2.8551;2.3633;2.1374;2.0862;2.0251;1.9912;1.9868;1.8077;1.748 -;-;-;-;-;-;-;-;-;- 865 + 1 1.99 100763.3 0.7300000190734863 2140 5105 7240 HBL1_DMSO_200M_050219_1,7247 HBL1_DMSO_200M_050219_1,7247,SQVEGEHQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7248 38.213 800.0 156600.0 25 0 22996.0 + -1 YPHDPPKV 8 79 952.9516489946288 1903.8887450560576 2 952.9507934451104 MULTI CID FTMS 0 0 0 7240 93623.8046875 0.0265781044119081 18 -1.5854034423828125 8 ENSG00000130725|ENST00000253023|UBE2M;ENST00000599829.1_1_19:59068052-59068363:-|nuORF;ENST00000593801.1_1_19:59068052-59068513:-|nuORF 3 {I|L}P{[MG]|[TS]}DPP{[QV]|[N{I|L}]|[RA]|[KV]} 9 -1 22.871 0.0 0.0 1.2013 0.0 0.0 951.4003550187514 0.0 951.4003550187514 0.0 8.701746761134718 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3054621874040891 {I|L}P{[MG]|[TS]}DPP{[QV]|[N{I|L}]|[RA]|[KV]} 1.2013 - 423 + 1 1.99 91647.3 0.5 2141 5105 7240 HBL1_DMSO_200M_050219_1,7248 HBL1_DMSO_200M_050219_1,7248, False False YPHDPPKV 38.212586 952.95079344511 447732672.0 7240.0 ENSG00000130725|ENST00000253023|UBE2M;;ENST00000599829.1_1_19:59068052-59068363:-|nuORF;;ENST00000593801.1_1_19:59068052-59068513:-|nuORF 6.552289803822835 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7250 38.217 37.0 870130.0 25 0 41990.0 + -1 CLCFAPCIAF 10 69 629.7757750052342 1257.5369970772683 2 629.7760497927666 MULTI CID FTMS 0 0 0 7249 1547472.5 0.1195843829834619 9 -0.916461944580078 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 12.531546534597751 0.6372748319968624 3 [QA]HDEAGAQNA{M(Oxidation (M))|F} 12 -1 + 62.547 0.0 0.0 4.9738 4.9738 81.051 0.0 0.0 0.0 6.199112850717938 10.189549981487076 6.199112850717938 6.199112850717938 0 0.6989700043360187 0.0 0.0 0.5994850021680094 [QA]HDEAGAQNA{M(Oxidation (M))|F};[HD][QA]EAGAQNA{M(Oxidation (M))|F};[QA]HDEQAQNA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEAGAQGGA{M(Oxidation (M))|F};[QA]HDEAGA[AG]NA{M(Oxidation (M))|F};[HD]{[CP]|[EA]}QAGAQNA{M(Oxidation (M))|F};[HD][QA]EQAQNA{M(Oxidation (M))|F};[HD][QA]EAQQNA{M(Oxidation (M))|F};[HD][QA]EAGAQGGA{M(Oxidation (M))|F} 4.9738;4.4808;4.448;4.4095;4.2503;4.2503;4.1014;3.9551;3.9165;3.7573 -;-;-;-;-;-;-;-;-;- 641 1 1.989 29530.5 1.0 2142 5106 7249 HBL1_DMSO_200M_050219_1,7250 HBL1_DMSO_200M_050219_1,7250,CLCFAPCIAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7251 38.219 91.0 449890.0 25 0 53614.0 + 3816 DAIRQSNQI 9 77 522.7750736687035 1043.535594404207 2 522.7752563357353 MULTI CID FTMS 0 0 0 7249 652569.6875 0.0492404342278415 6 -0.5084686279296875 2 Unmodified _DAIRQSNQI_ ENSG00000269335|ENST00000594239|IKBKG;nc|ENSG00000269335|Q9Y6K9-2|IKBKG;nc|ENSG00000269335|Q9Y6K9-3|IKBKG 47.594388314883695 0.0456443387682827 3 {[DA]|[EG]}{I|L}RQSGGQ{I|L} 10 2 + 93.057 0.0 0.0 8.9175 8.9175 93.882 0.0 0.0 0.0 24.25968732272281 75.94432730967324 24.25968732272281 9.164539485499262 0 0.7134679910804405 2.0 0.7302046884880937 0.6505149978319906 {[DA]|[EG]}{I|L}RQSGGQ{I|L};{[DA]|[EG]}{I|L}R[AG]SGGQ{I|L};{[DA]|[EG]}{I|L}RQSGG[AG]{I|L};{[DA]|[EG]}{I|L}RQSNQ{I|L};{[DA]|[EG]}{I|L}R[AG]SGG[AG]{I|L};{[DA]|[EG]}{I|L}RQSN[AG]{I|L};{[DA]|[EG]}{I|L}R[AG]SNQ{I|L};{[DA]|[EG]}{I|L}RQSG{I|L}{[QG]|[NA]};{[DA]|[EG]}{I|L}W[KG]GGQ{I|L};{[DA]|[EG]}{I|L}W{I|L}EGQ{I|L} 8.9175;8.0393;8.0393;7.9756;7.1645;7.0932;7.0932;6.8208;6.7393;6.3029 -;-;-;+;-;-;-;-;-;- + 404 1 1.989 35395.7 1.0 2143 5106 7249 HBL1_DMSO_200M_050219_1,7251 HBL1_DMSO_200M_050219_1,7251,DAIRQSNQI True True DAIRQSNQI 38.21893 522.775256335735 123095992.0 7249.0 nc|ENSG00000269335|Q9Y6K9-3|IKBKG;;nc|ENSG00000269335|Q9Y6K9-2|IKBKG;;ENSG00000269335|ENST00000594239|IKBKG 6.471218585968018 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7252 38.22 51.0 1157000.0 25 0 137550.0 + 41211 VPEYIELM 8 70 497.25365778828825 992.4927626433764 2 497.2537414431572 MULTI CID FTMS 0 0 0 7249 1009464.5625 0.4196403842494435 -2 0.105865478515625 3 Unmodified _VPEYIELM_ REV__ENSG00000108622|ENST00000579788|ICAM2 26.34127834903884 0.4900704351052977 3 VPESS 5 -1 65.433 0.0 0.0 6.5928 0.0 0.0 0.0 490.2414791887904 490.2414791887904 34.93115345883339 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.8494850021680094 0.0 VPESS 6.5928 - 99 + 1 1.989 49439.9 1.0 2144 5106 7249 HBL1_DMSO_200M_050219_1,7252 HBL1_DMSO_200M_050219_1,7252,VPEYIELM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7253 38.223 148.0 499820.0 25 0 78595.0 + -1 QSLMVHNC 8 104 474.2069265188513 946.3993001045028 2 474.2074767947197 MULTI CID FTMS 0 0 0 7249 442081.46875 1.0 0 0.0 4 Oxidation (M) _QSLM(Oxidation (M))VHNC_ REV__ENSG00000051009|ENST00000449352|FHIP1B;REV__nc|ENSG00000051009|Q8N612-2|FHIP1B;REV__nc|ENSG00000051009|Q8N612-3|FHIP1B 21.74664581756881 0.5868176546531598 3 {[QS]|[NT]}[WC(Carbamidomethyl (C))]G{I|L} 6 -1 40.04 0.0 0.0 4.2307 0.0 0.0 0.0 212.063801869944 212.063801869944 28.35734031409565 0.0 0.0 0.0 0 0.5 0.744727494896694 0.0 1.4916440611282624 {[QS]|[NT]}[WC(Carbamidomethyl (C))]G{I|L} 4.2307 - 107 1 1.989 63653.7 1.0 2145 5106 7249 HBL1_DMSO_200M_050219_1,7253 HBL1_DMSO_200M_050219_1,7253,QSLMVHNC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7254 38.226 128.0 488170.0 25 0 35493.0 + 3650 DAEMTTRMV 9 103 535.2362804984871 1068.458008063774 2 535.2364990115166 MULTI CID FTMS 0 0 0 7249 409909.34375 0.0819864927881932 11 -1.0537948608398438 5 Oxidation (M) _DAEMTTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 41.95555342248728 0.0647214845423414 3 {[DA]|[EG]}EMTTR{M(Oxidation (M))|F}V 9 0 + 65.308 0.0 0.0 6.1123 6.1123 90.659 0.0 0.0 0.0 39.14906385897977 3.3593448182167265 3.3593448182167265 17.501225267834002 0 1.2302046884880935 2.0 0.3807196863200844 0.0 + + {[DA]|[EG]}EMTTR{M(Oxidation (M))|F}V;{[DA]|[EG]}E[{M(Oxidation (M))|F}E]GR{M(Oxidation (M))|F}V;WEMTT[VG]{M(Oxidation (M))|F}V;{[DA]|[EG]}E[W{M(Oxidation (M))|F}][VG]{M(Oxidation (M))|F}V;WE[W{M(Oxidation (M))|F}]R{M(Oxidation (M))|F}V;WE[{M(Oxidation (M))|F}E]G[VG]{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}RTTME[EC];[YT]RT[PA]E[EC];{[QN]|[E{I|L}]|[KN]}[KS]TME[EC];{[{M(Oxidation (M))|F}C]|[YS]}E[PA]T[VG]{M(Oxidation (M))|F}V 6.1123;4.4743;4.2405;3.4477;3.316;2.6025;2.2563;1.8678;1.6284;1.1104 +;-;-;-;-;-;-;-;-;- + 295 + 1 1.989 51594.9 1.0 2146 5106 7249 HBL1_DMSO_200M_050219_1,7254 HBL1_DMSO_200M_050219_1,7254,DAEMTTRMV True False DAEMTTRMV 38.225844 535.236499011517 107168316.0 7249.0 ENSG00000205220|ENST00000358514|PSMB10 8.552442073822021 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7255 38.24 800.0 216860.0 25 0 20882.0 -1 0 62 832.71288912421 2495.11683797283 3 832.7136718630791 MULTI CID FTMS 0 0 0 7249 160809.640625 0.5345014568695565 3 -0.2250862121582031 6 3 [RD]WRDD 6 -1 21.119 0.0 0.0 0.84643 0.0 0.0 0.0 1648.7272857263588 1648.7272857263588 8.16061246681059 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [RD]WRDD 0.84643 - 50 1 1.989 126247.8 0.7200000286102295 2147 5106 7249 HBL1_DMSO_200M_050219_1,7255 HBL1_DMSO_200M_050219_1,7255, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7256 38.248 459.0 459070.0 25 0 58890.0 27321 PHPPAATV 8 170 395.2164772846166 788.4184016360332 2 395.2157775759697 MULTI CID FTMS 0 0 0 7249 133102.578125 0.8349309468320109 -2 0.105865478515625 7 Unmodified _PHPPAATV_ ENST00000588420.1_1_19:46144812-46145034:-|nuORF 19.438996006549623 0.6237395211498085 3 PHDPPKV 7 4 + 64.939 0.0 0.0 8.2366 8.2366 91.804 0.0 0.0 0.0 7.806394243556767 7.806394243556767 7.806394243556767 7.806394243556767 0 2.234636880228201 1.2218487496163564 0.0 0.0 PHDPPKV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DPPKV;PHDPPVK;[HD]PPPKV;[DP]HPPKV;V{[{M(Oxidation (M))|F}C]|[YS]}PPKV;VP{[{M(Oxidation (M))|F}C]|[YS]}PKV;PV{[{M(Oxidation (M))|F}C]|[YS]}PKV;[WY]PPKV;PHDV[KP]P 8.2366;7.2465;7.1044;6.0177;5.21;5.0811;5.0504;4.7891;4.5473;4.1026 -;-;-;-;-;-;-;-;-;- 333 + 1 1.989 161786.7 1.0 2148 5106 7249 HBL1_DMSO_200M_050219_1,7256 HBL1_DMSO_200M_050219_1,7256,PHPPAATV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7257 38.262 800.0 113710.0 25 0 4581.2 -1 0 94 846.376550874691 2536.107823224273 3 846.7109863162041 MULTI CID FTMS 0 0 0 7249 121602.015625 0.7520355858144537 -2 0.105865478515625 8 3 {I|L}T{[QG]|[NA]}GTWG 8 -1 27.912 0.0 0.0 1.1006 0.0 0.0 1097.500182849735 635.2058199518186 1732.7060028015535 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 {I|L}T{[QG]|[NA]}GTWG 1.1006 - 411 + 1 1.989 67443.1 0.6399999856948853 2149 5106 7249 HBL1_DMSO_200M_050219_1,7257 HBL1_DMSO_200M_050219_1,7257, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7258 38.269 426.0 234660.0 25 0 21067.0 + 22415 LPTESPHSSV 10 136 527.2633493825351 1052.5121458318702 2 527.2645141482353 MULTI CID FTMS 0 0 0 7249 119509.71875 0.6487610841503965 -2 0.105865478515625 9 Unmodified _LPTESPHSSV_ ENSG00000117114|ENST00000686636|ADGRL2;ENST00000464775.5_1_1:82445609-82456083:+|nuORF;ENST00000472424.1_1_1:82447552-82452975:+|nuORF;nc|ENSG00000117114|O95490-2|ADGRL2;nc|ENSG00000117114|O95490-3|ADGRL2;nc|ENSG00000117114|O95490-4|ADGRL2;nc|ENSG00000117114|O95490-5|ADGRL2;nc|ENSG00000117114|O95490-6|ADGRL2;nc|ENSG00000117114|O95490-7|ADGRL2;nc|ENSG00000117114|O95490|ADGRL2 45.69961567697781 0.105390671673896 3 {I|L}PTESPHSSV 10 0 + 62.307 0.0 0.0 5.9199 5.9199 90.263 0.0 0.0 0.0 47.6144901280079 3.4852739244003104 3.4852739244003104 18.735703893910653 0 0.7302046884880937 1.6989700043360187 0.5228787452803376 0.0 + + {I|L}PTESPHSSV;{I|L}P[WE]C(Carbamidomethyl (C))[H{I|L}]V;{I|L}P[WE]C(Carbamidomethyl (C))[{I|L}V]H;{I|L}P[WE]C(Carbamidomethyl (C))[HV]{I|L};{I|L}PT[KS]D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V;{I|L}P[WM]PHSSV;{I|L}PT[KS]D[HQ]Q;{I|L}PT[KS]DQQH;{I|L}P[WE][WH]SV;{I|L}PT[{I|L}T][YC(Carbamidomethyl (C))]SV 5.9199;4.1398;4.0386;3.9155;3.8168;3.8037;3.7734;3.7157;3.3663;3.1609 +;-;-;-;-;-;-;-;-;- + 546 + 1 1.989 82946.4 1.0 2150 5106 7249 HBL1_DMSO_200M_050219_1,7258 HBL1_DMSO_200M_050219_1,7258,LPTESPHSSV True True LPTESPHSSV 38.269265 527.264514148235 1109236.125 7249.0 nc|ENSG00000117114|O95490|ADGRL2;;nc|ENSG00000117114|O95490-5|ADGRL2;;ENST00000464775.5_1_1:82445609-82456083:+|nuORF;;nc|ENSG00000117114|O95490-3|ADGRL2;;ENST00000472424.1_1_1:82447552-82452975:+|nuORF;;nc|ENSG00000117114|O95490-6|ADGRL2;;nc|ENSG00000117114|O95490-4|ADGRL2;;nc|ENSG00000117114|O95490-2|ADGRL2;;nc|ENSG00000117114|O95490-7|ADGRL2;;ENSG00000117114|ENST00000686636|ADGRL2 6.944779872894287 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7260 38.274 4.6 16261000.0 25 0 2728700.0 + 44708 YPHDPPKV 8 88 318.16782282383326 951.4816390717 3 318.1676513552666 MULTI CID FTMS 0 0 0 7259 12571345.0 1.0 0 0.0 1 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 14.838274106304384 0.6917062315640577 3 YPHDPPKV 8 0 + 31.873 0.0 0.0 3.3498 3.3498 74.799 0.0 0.0 0.0 8.500707439735322 6.831757371527871 6.831757371527871 4.662355562743272 0 0.218765315847925 0.0 0.0 0.0 + + YPHDPPKV;YWYPPKV;YPWYPKV;YPHDPV[KP];YPHDVP[KP];YWYPV[KP];YPWYV[KP];YWYVP[KP];YPRR{[{M(Oxidation (M))|F}D]|MM}V;[KP][{I|L}T]DH{[QN]|[E{I|L}]|[KN]} 3.3498;2.8598;2.7807;2.6318;2.2136;2.1418;2.0627;1.7235;0.84002;0.14103 +;-;-;-;-;-;-;-;-;- + 141 + 1 1.989 68938.4 1.0 2151 5107 7259 HBL1_DMSO_200M_050219_1,7260 HBL1_DMSO_200M_050219_1,7260,YPHDPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7261 38.275 65.0 681210.0 25 0 89081.0 + 43123 VYPERSTSY 9 64 551.2639447778929 1100.5133366225857 2 551.2642700076103 MULTI CID FTMS 0 0 0 7259 811109.25 0.1821504580208728 9 -0.91754150390625 2 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 24.020572477871973 0.2255576514309169 3 [YV]PE 4 5 41.312 0.0 0.0 3.7539 0.0 0.0 0.0 609.2644747369749 609.2644747369749 24.85863111416478 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3252574989159953 0.0 + [YV]PE 3.7539 + + 24 + 1 1.989 39157.4 1.0 2152 5107 7259 HBL1_DMSO_200M_050219_1,7261 HBL1_DMSO_200M_050219_1,7261,VYPERSTSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7262 38.277 55.0 1183100.0 25 0 121380.0 + 33250 SFPASSGVSH 10 77 488.2303025289275 974.446052124655 2 488.2306701540947 MULTI CID FTMS 0 0 0 7259 1045656.125 0.7216630590339044 19 -1.4649581909179688 3 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 56.17704186161178 0.0466144807663799 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH 10 0 + 87.361 0.0 0.0 8.9652 8.9652 98.131 0.0 0.0 0.0 67.85310187473284 13.33974535948633 13.33974535948633 34.52028618440272 0 0.3054621874040891 2.0 1.0941876774005248 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH;{[QV]|[N{I|L}]|[RA]|[KV]}NGSSAPDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[QV]|[N{I|L}]|[RA]|[KV]}GGGSSAPDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;[PA]S[SG]VSH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QV]|[N{I|L}]|[RA]|[KV]}[DG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PDT;{[QV]|[N{I|L}]|[RA]|[KV]}N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}[KQ]SH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 8.9652;5.4227;4.8919;4.4822;4.348;2.3453;1.5977;0.74031;0.68352;0.48966 +;-;-;-;-;-;-;-;-;- + 299 + 1 1.989 56986.5 1.0 2153 5107 7259 HBL1_DMSO_200M_050219_1,7262 HBL1_DMSO_200M_050219_1,7262,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7263 38.278 72.0 1112100.0 25 0 119760.0 + 44544 YPESNSRAI 9 85 518.7563404603618 1035.4981279875235 2 518.7567626833916 MULTI CID FTMS 0 0 0 7259 883661.625 1.0 0 0.0 4 Unmodified _YPESNSRAI_ ENSG00000166037|ENST00000325542|CEP57;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 31.26834338654808 0.1333407332142048 3 YPESN 5 4 68.003 0.0 0.0 6.5672 0.0 0.0 0.0 442.24216638736567 442.24216638736567 49.21781594098974 0.0 0.0 0.0 0 0.6505149978319906 2.0 0.805462187404089 0.0 + YPESN 6.5672 + + 36 + 1 1.989 68794.9 1.0 2154 5107 7259 HBL1_DMSO_200M_050219_1,7263 HBL1_DMSO_200M_050219_1,7263,YPESNSRAI False True YPESNSRAI 38.278302 518.756762683392 48841179.0 7259.0 nc|ENSG00000166037|Q86XR8-3|CEP57;;nc|ENSG00000166037|Q86XR8-4|CEP57;;nc|ENSG00000166037|Q86XR8-5|CEP57;;nc|ENSG00000166037|Q86XR8-2|CEP57;;ENSG00000166037|ENST00000325542|CEP57 5.002585252126058 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7264 38.28 70.0 1008300.0 25 0 172280.0 26803 PAPPPPPPP 9 77 433.7420770129379 865.4696010926758 2 433.7422973513603 MULTI CID FTMS 0 0 0 7259 636006.5 0.4622446801068748 8 -0.8597640991210938 5 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;ENSG00000103495|ENST00000322945|MAZ;ENSG00000105429|ENST00000251268|MEGF8;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139687|ENST00000267163|RB1;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000158195|ENST00000618852|WASF2;ENSG00000165821|ENST00000537235|SALL2;ENSG00000167771|ENST00000301459|RCOR2;ENSG00000169862|ENST00000304623|CTNND2;ENSG00000171634|ENST00000306378|BPTF;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000182601|ENST00000331351|HS3ST4;ENSG00000184937|ENST00000452863|WT1;ENSG00000196367|ENST00000456197|TRRAP;ENSG00000197483|ENST00000598519|ZNF628;ENSG00000205177|ENST00000379011|C11orf91;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000272333|ENST00000420124|KMT2B;ENST00000263228.3_1_9:33817570-33817774:+|nuORF;ENST00000378204.6_1_8:119123785-119123992:-|nuORF;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;ENST00000592092.1_1_19:36224173-36224410:+|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000103495|P56270-2|MAZ;nc|ENSG00000103495|P56270-3|MAZ;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000169862|Q9UQB3-2|CTNND2;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;nc|nan|Q3C1V1-2|C11orf91;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000060749|ENST00000650167|QSER1;REV__ENSG00000077420|ENST00000376236|APBB1IP;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000108819|ENST00000612501|PPP1R9B;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000112320|ENST00000317357|SOBP;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__ENSG00000126464|ENST00000418929|PRR12;REV__ENSG00000136848|ENST00000408936|DAB2IP;REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000168874|ENST00000306279|ATOH8;REV__ENSG00000171450|ENST00000302625|CDK5R2;REV__ENSG00000176058|ENST00000409012|TPRN;REV__ENSG00000176165|ENST00000313071|FOXG1;REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENSG00000182484|ENST00000359512|WASH6P;REV__ENSG00000188620|ENST00000357878|HMX3;REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENSG00000247746|ENST00000500968|USP51;REV__ENSG00000274588|ENST00000611977|DGKK;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000400706.3_1_12:88275-90926:+|nuORF;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;REV__ENST00000557932.5_1_15:102513813-102516466:+|nuORF;REV__ENST00000602719.5_1_16:85784553-85784670:-|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000168874|Q96SQ7-2|ATOH8;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6;REV__nc|ENSG00000234769|A8MWX3|WASH4P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P;REV__nc|ENSG00000292372|Q9NQA3|WASH6P 67.41302359171755 0.0220989861905124 3 [PA]PPPP[YK] 8 3 + 49.646 0.0 0.0 5.7363 5.7363 88.722 0.0 0.0 0.0 12.073259432077563 30.949659952399813 12.073259432077563 13.11919338094107 0 1.2302046884880935 1.6989700043360187 0.0 0.0 [PA]PPPP[YK];[YK]APP[YK];{[HG]|PP}PAPP[YK];[PA][YK]P[YK];{[HG]|PP}APPP[YK];[YK]PAP[YK];{[HG]|PP}PPAP[YK];[PA]P[YK][YK];{[NV]|[RG]}[{M(Oxidation (M))|F}V]P[YK];{[HG]|PP}A[YK][YK] 5.7363;4.2205;3.9176;3.8167;3.4255;3.0091;2.7062;2.3333;1.2622;0.022437 -;-;-;-;-;-;-;-;-;- 211 1 1.989 56623.7 1.0 2155 5107 7259 HBL1_DMSO_200M_050219_1,7264 HBL1_DMSO_200M_050219_1,7264,PAPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7265 38.283 138.0 463780.0 25 0 38196.0 20567 LLNKNGTVK 9 98 493.8033587992312 985.5921646652624 2 493.8032714724541 MULTI CID FTMS 0 0 0 7259 413191.3125 1.0 0 0.0 6 Unmodified _LLNKNGTVK_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 21.53697664764585 0.2571576504437394 3 TVK 3 6 34.737 0.0 0.0 3.5245 0.0 0.0 639.3703151553 0.0 639.3703151553 0.0 17.26280941356464 0.0 0.0 0 1.0 0.0 0.0 0.3054621874040891 + TVK 3.5245 + + 152 + 1 1.989 53947.4 1.0 2156 5107 7259 HBL1_DMSO_200M_050219_1,7265 HBL1_DMSO_200M_050219_1,7265,LLNKNGTVK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7266 38.285 95.0 1159800.0 25 0 277730.0 + 2577 ASISHVAHV 9 98 307.5033337307795 919.4881717925384 3 307.5030090212822 MULTI CID FTMS 0 0 0 7259 392222.15625 1.0 0 0.0 7 Unmodified _ASISHVAHV_ ENSG00000076242|ENST00000231790|MLH1;ENST00000466900.5_1_3:37035370-37047454:+|nuORF;ENST00000539477.5_1_3:37035370-37053334:+|nuORF;nc|ENSG00000076242|P40692-3|MLH1 23.1484247019978 0.2366544122328345 3 SHVAHV 6 3 19.756 0.0 0.0 2.1486 0.0 0.0 271.15415349411086 0.0 271.15415349411086 0.0 7.052693095156679 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + SHVAHV 2.1486 + + 99 + 1 1.989 92022.1 1.0 2157 5107 7259 HBL1_DMSO_200M_050219_1,7266 HBL1_DMSO_200M_050219_1,7266,ASISHVAHV False True ASISHVAHV 38.284792 307.503009021282 2021833.375 7259.0 ENST00000466900.5_1_3:37035370-37047454:+|nuORF;;ENST00000539477.5_1_3:37035370-37053334:+|nuORF;;ENSG00000076242|ENST00000231790|MLH1;;nc|ENSG00000076242|P40692-3|MLH1 7.019148031870524 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7267 38.287 115.0 499390.0 25 0 38608.0 + 36367 SYQDRRQSW 9 83 409.1951603905586 1224.5636517718758 3 409.1949340701103 MULTI CID FTMS 0 0 0 7259 330039.34375 1.0 0 0.0 8 Unmodified _SYQDRRQSW_ ENSG00000149636|ENST00000373750|DSN1;nc|ENSG00000149636|Q9H410-2|DSN1;nc|ENSG00000149636|Q9H410-4|DSN1 16.149105407346934 0.3995459350917656 3 SYWGCQ 6 6 66.191 0.0 0.0 5.4052 0.0 0.0 0.0 497.2845247858032 497.2845247858032 54.59691590396389 0.0 0.0 0.0 0 0.6549471895720984 2.0 0.0 0.0 SYWGCQ 5.4052 - 185 + 1 1.989 51956.3 1.0 2158 5107 7259 HBL1_DMSO_200M_050219_1,7267 HBL1_DMSO_200M_050219_1,7267,SYQDRRQSW False True SYQDRRQSW 38.28719 409.19493407011 1940380.125 7259.0 nc|ENSG00000149636|Q9H410-2|DSN1;;nc|ENSG00000149636|Q9H410-4|DSN1;;ENSG00000149636|ENST00000373750|DSN1 7.050693035125732 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7268 38.301 800.0 138610.0 25 0 27850.0 + 36368 SYQDRRQSW 9 109 613.2890330730113 1224.5635132128225 2 613.2897216677666 MULTI CID FTMS 0 0 0 7259 149652.90625 1.0 0 0.0 9 Unmodified _SYQDRRQSW_ ENSG00000149636|ENST00000373750|DSN1;nc|ENSG00000149636|Q9H410-2|DSN1;nc|ENSG00000149636|Q9H410-4|DSN1 17.11289562659939 0.3734572693229295 3 {[DA]|[EG]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]CQ 6 8 24.27 0.0 0.0 1.9819 0.0 0.0 0.0 497.28330408267817 497.28330408267817 6.170912423450403 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[DA]|[EG]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]CQ 1.9819 - 257 + 1 1.989 88497.7 0.8299999833106995 2159 5107 7259 HBL1_DMSO_200M_050219_1,7268 HBL1_DMSO_200M_050219_1,7268,SYQDRRQSW False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7269 38.315 800.0 262120.0 25 0 67053.0 + 1175 AHSDAYQTREI 11 114 645.8076490090257 1289.6007450848513 2 645.8072387576103 MULTI CID FTMS 0 0 0 7259 109602.8515625 0.4595067283256805 -1 0.0566978454589843 10 Unmodified _AHSDAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 72.27226680046368 0.0258195128762744 3 AHSDAYQT 8 3 100.0 0.0 0.0 7.7546 0.0 0.0 0.0 413.2155855768188 413.2155855768188 78.57631599068426 0.0 0.0 0.0 0 2.3807196863200843 1.5228787452803376 0.8494850021680094 0.2742275032520141 + AHSDAYQT 7.7546 + + 1106 + 1 1.989 152430.6 0.7300000190734863 2160 5107 7259 HBL1_DMSO_200M_050219_1,7269 HBL1_DMSO_200M_050219_1,7269,AHSDAYQTREI True True AHSDAYQTREI 38.314859 645.80723875761 3977383.625 7259.0 ENSG00000127914|ENST00000356239|AKAP9;;nc|ENSG00000127914|Q99996-3|AKAP9;;nc|ENSG00000127914|Q99996-6|AKAP9 5.227798541386922 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7270 38.329 800.0 66634.0 25 0 3685.5 -1 0 60 912.4076274700632 2734.2010530103894 3 913.0757934451104 MULTI CID FTMS 0 0 0 7259 97799.1796875 1.0 0 0.0 11 3 TWGH 4 -1 14.702 0.0 0.0 0.53772 0.0 0.0 1751.8208783051143 498.15155969791255 2249.972438003027 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TWGH 0.53772 - 45 + 1 1.989 44965.1 0.5699999928474426 2161 5107 7259 HBL1_DMSO_200M_050219_1,7270 HBL1_DMSO_200M_050219_1,7270, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7271 38.343 800.0 48297.0 25 0 11252.0 -1 0 48 1082.4607934268167 3244.3605508806504 3 1083.127856433392 MULTI CID FTMS 0 0 0 7259 89414.8828125 0.9328843737717544 1 -0.0732841491699218 12 3 WE 2 -1 5.5732 0.0 0.0 0.17178 0.0 0.0 2353.93148701522 572.3053682916624 2926.236855306882 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WE 0.17178 - 35 + 1 1.989 34181.7 0.4799999892711639 2162 5107 7259 HBL1_DMSO_200M_050219_1,7271 HBL1_DMSO_200M_050219_1,7271, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7273 38.347 11.0 5912800.0 25 0 776590.0 + 21978 LPPPAAKTV 9 73 447.2760150369352 892.5374771406705 2 447.2763549685478 MULTI CID FTMS 0 0 0 7272 6443165.5 0.986264518441892 -1 0.0732841491699218 1 Unmodified _LPPPAAKTV_ ENSG00000168894|ENST00000306368|RNF181;ENST00000461845.1_1_2:85822886-85823939:+|nuORF 27.628801355627647 0.1796483985696185 3 {I|L}PP 3 6 53.06 0.0 0.0 5.9448 0.0 0.0 0.0 582.3268977526918 582.3268977526918 43.14487301661957 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.0 0.0 + {I|L}PP 5.9448 + + 81 + 1 1.989 54802.9 1.0 2163 5108 7272 HBL1_DMSO_200M_050219_1,7273 HBL1_DMSO_200M_050219_1,7273,LPPPAAKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7274 38.348 39.0 1257600.0 25 0 116490.0 + 32134 RVPETVADA 9 79 479.25343778994335 956.4923226466868 2 479.2534057497978 MULTI CID FTMS 0 0 0 7272 1509480.25 0.8346746177906076 2 -0.1883926391601562 2 Unmodified _RVPETVADA_ ENSG00000137714|ENST00000260270|FDX1;ENST00000449115.1_1_20:33063731-33063836:-|nuORF 41.95555342248728 0.0647214845423414 3 [RV][EP]TVADA 9 0 + 64.587 0.0 0.0 6.7525 6.7525 88.004 0.0 0.0 0.0 7.269987279362624 7.269987279362624 7.269987279362624 7.269987279362624 0 0.9247425010840048 1.2218487496163564 0.4247425010840047 0.0 + + [RV][EP]TVADA;{[DA]|[EG]}V[VP]TVAW;{[DA]|[EG]}V[VP]TVWA;[EP][RV]TVADA;{[VA]|[{I|L}G]}D[VP]TVAW;[RV][EP]G[{I|L}T]DA;{[DA]|[EG]}V[RP][{I|L}T]DA;{[VA]|[{I|L}G]}D[VP]TVWA;{[DA]|[EG]}V[VP]G[{I|L}T]W;[RV][EP]GV{[ET]|[MV]}A 6.7525;5.9924;5.4697;4.7443;3.7569;3.7199;3.2746;3.2341;2.9599;2.6984 +;-;-;-;-;-;-;-;-;- + 133 1 1.989 44117.3 1.0 2164 5108 7272 HBL1_DMSO_200M_050219_1,7274 HBL1_DMSO_200M_050219_1,7274,RVPETVADA True True RVPETVADA 38.348073 479.253405749798 31882118.0 7272.0 ENST00000449115.1_1_20:33063731-33063836:-|nuORF;;ENSG00000137714|ENST00000260270|FDX1 6.8669358889261884 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7275 38.35 79.0 588030.0 25 0 17014.0 -1 0 80 628.8887612827801 3139.4074240809005 5 629.0898315310478 MULTI CID FTMS 0 0 0 7272 772608.5 0.4246402692473291 -1 0.0732841491699218 3 3 GTWG 4 -1 19.725 0.0 0.0 0.6283 0.0 0.0 1419.65013103607 1315.570454479797 2735.2205855158672 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 GTWG 0.6283 - 214 + 1 1.989 42255.0 1.0 2165 5108 7272 HBL1_DMSO_200M_050219_1,7275 HBL1_DMSO_200M_050219_1,7275, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7276 38.352 101.0 868980.0 25 0 88205.0 -1 0 47 624.7862646997731 2495.1159529326924 4 625.0375244021416 MULTI CID FTMS 0 0 0 7272 710515.6875 0.2182678935785498 5 -0.5136909484863281 4 3 DD 2 -1 24.776 0.0 0.0 0.99299 0.0 0.0 728.3385571708828 1533.703306824814 2262.041863995697 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 DD 0.99299 - 9 + 1 1.989 70744.8 1.0 2166 5108 7272 HBL1_DMSO_200M_050219_1,7276 HBL1_DMSO_200M_050219_1,7276, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7277 38.354 99.0 987130.0 25 0 144880.0 -1 0 80 785.8593192915429 3139.408171299772 4 786.1111938357353 MULTI CID FTMS 0 0 0 7272 639851.9375 0.3998475462817368 -2 0.1299819946289062 5 3 QGSH 4 -1 15.946 0.0 0.0 0.50793 0.0 0.0 2318.0687680788715 409.1479891412719 2727.216757220144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5451140161145328 0.5 QGSH 0.50793 - 246 + 1 1.989 73964.6 1.0 2167 5108 7272 HBL1_DMSO_200M_050219_1,7277 HBL1_DMSO_200M_050219_1,7277, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7278 38.356 86.0 1272000.0 25 0 285710.0 27507 PKLPPRGVG 9 97 307.52731452707565 919.560114181427 3 307.5272094607353 MULTI CID FTMS 0 0 0 7272 626132.0625 0.0443404525468854 -11 0.7346038818359375 6 Unmodified _PKLPPRGVG_ ENSG00000169184|ENST00000302326|MN1 6.723162845929126 0.6799819581413107 3 V 1 8 11.259 0.0 0.0 1.2244 0.0 0.0 802.4808046494919 0.0 802.4808046494919 0.0 3.3542100103953114 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2244 + + 97 + 1 1.989 91464.3 1.0 2168 5108 7272 HBL1_DMSO_200M_050219_1,7278 HBL1_DMSO_200M_050219_1,7278,PKLPPRGVG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7279 38.358 77.0 968310.0 25 0 133710.0 + 1176 AHSDAYQTREI 11 81 430.8735709131557 1289.598883339667 3 430.8738281130791 MULTI CID FTMS 0 0 0 7272 549703.5625 1.0 0 0.0 7 Unmodified _AHSDAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 19.143941131932102 0.6369309327873195 3 [HA]SDAY 6 5 17.853 0.0 0.0 1.3844 0.0 0.0 0.0 642.3215836518417 642.3215836518417 6.615772721310837 0.0 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 + [HA]SDAY 1.3844 + + 46 1 1.989 67716.2 1.0 2169 5108 7272 HBL1_DMSO_200M_050219_1,7279 HBL1_DMSO_200M_050219_1,7279,AHSDAYQTREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7280 38.361 137.0 598750.0 25 0 56066.0 + 23660 LTRQLELFA 9 98 545.8175715518128 1089.6205901704254 2 545.8183471560478 MULTI CID FTMS 0 0 0 7272 510644.25 1.0 0 0.0 8 Unmodified _LTRQLELFA_ REV__ENSG00000261787|ENST00000563496|TCF24 10.073929032068715 0.563993802247229 3 [{I|L}T]{M(Oxidation (M))|F} 3 -1 21.427 0.0 0.0 1.9664 0.0 0.0 0.0 725.3934532898191 725.3934532898191 5.851594539010918 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}T]{M(Oxidation (M))|F} 1.9664 - 80 1 1.989 70780.0 1.0 2170 5108 7272 HBL1_DMSO_200M_050219_1,7280 HBL1_DMSO_200M_050219_1,7280,LTRQLELFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7281 38.363 104.0 811410.0 25 0 131300.0 -1 0 101 338.1966858465203 337.18940937992033 1 338.1959716677666 MULTI CID FTMS 0 0 0 7272 484655.125 1.0 0 0.0 9 3 R 1 -1 11.99 0.0 0.0 3.5558 0.0 0.0 163.07733159847345 0.0 163.07733159847345 0.0 1.808639180087965 0.0 0.0 0 0.0 0.0 0.0 0.0 R 3.5558 - 15 + 1 1.989 73843.1 1.0 2171 5108 7272 HBL1_DMSO_200M_050219_1,7281 HBL1_DMSO_200M_050219_1,7281, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7282 38.367 204.0 293160.0 25 0 34808.0 + 36380 SYQESTKQL 9 100 542.2694352689783 1082.5243176047566 2 542.2700073122978 MULTI CID FTMS 0 0 0 7272 383807.96875 0.042970145968951 7 -0.7864799499511719 10 Unmodified _SYQESTKQL_ ENSG00000124422|ENST00000261497|USP22;ENSG00000247746|ENST00000500968|USP51;ENSG00000273820|ENST00000621775|USP27X;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22 45.69961567697781 0.0497987121815769 3 {[{M(Oxidation (M))|F}C]|[YS]}QE{[MG]|[TS]}KQ{I|L} 9 0 + 31.832 0.0 0.0 2.9405 2.9405 68.006 0.0 0.0 0.0 4.762036441594194 2.6504116187646467 2.6504116187646467 0.7133375178436516 0 0.7302046884880937 0.0 0.5 0.7302046884880937 + + {[{M(Oxidation (M))|F}C]|[YS]}QE{[MG]|[TS]}KQ{I|L};[AG]YSE{[MG]|[TS]}KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QY[PG]KQ{I|L};[AG]YS[WM]KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}Q{I|L}{[CT]|[{M(Oxidation (M))|F}G]}KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}Q[WM]KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QE[RK]C(Carbamidomethyl (C)){I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]E{[MG]|[TS]}KQ{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RK]YQ[MT];{[QV]|[N{I|L}]|[RA]|[KV]}[WK]YQ[MT] 2.9405;2.8746;2.7567;2.5493;2.4998;2.1583;2.1217;2.0899;2.0673;2.0212 +;-;-;-;-;-;-;-;-;- + 351 + 1 1.989 50163.6 1.0 2172 5108 7272 HBL1_DMSO_200M_050219_1,7282 HBL1_DMSO_200M_050219_1,7282,SYQESTKQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7283 38.369 93.0 558040.0 25 0 27282.0 + 7381 EGGARRICAH 10 95 535.2677072926216 1068.520861652043 2 535.2672607302666 MULTI CID FTMS 0 0 0 7272 334987.5 0.1188910986107145 -2 0.1299819946289062 11 Unmodified _EGGARRICAH_ REV__ENSG00000235711|ENST00000421388|ANKRD34C 13.90604991867851 0.6142120002215601 3 [EP]QDTR[NP]{I|L} 9 -1 + 35.128 0.0 0.0 3.2876 3.2876 79.923 0.0 0.0 0.0 17.848265625289844 5.686362358410129 5.686362358410129 9.208187539523756 0 0.0 0.0 0.5 0.3807196863200844 [EP]QDTR[NP]{I|L};[EP][AG]DTR[NP]{I|L};{[SA]|[TG]}[{I|L}A][VG]TDQ[HA];{[DA]|[EG]}GRR{[WT]|[RM]}[HA];[QA]HSVW[WR];[QA]HT[RD][WR] 3.2876;2.4258;1.2864;1.0384;0.41201;0.29327 -;-;-;-;-;- 470 + 1 1.989 46855.5 1.0 2173 5108 7272 HBL1_DMSO_200M_050219_1,7283 HBL1_DMSO_200M_050219_1,7283,EGGARRICAH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7284 38.383 800.0 97969.0 25 0 25689.0 -1 0 42 1133.1313051436084 3396.372086031025 3 1133.464770495892 MULTI CID FTMS 0 0 0 7272 210020.890625 1.0 0 0.0 12 3 E 1 -1 6.9897 0.0 0.0 0.2058 0.0 0.0 2740.143753705762 524.1624239557249 3264.306177661487 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.2058 - 17 + 1 1.989 74208.5 0.6700000166893005 2174 5108 7272 HBL1_DMSO_200M_050219_1,7284 HBL1_DMSO_200M_050219_1,7284, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7285 38.386 183.0 319600.0 25 0 66324.0 + 11043 GDANFVYL 8 98 449.71701227957 897.41947162594 2 449.7163268923759 MULTI CID FTMS 0 0 0 7272 212464.25 0.2818347812129822 20 -1.429840087890625 13 Unmodified _GDANFVYL_ REV__ENSG00000145934|ENST00000518659|TENM2;REV__nc|ENSG00000145934|Q9NT68-2|TENM2 26.34127834903884 0.4900704351052977 3 [DG]A 3 -1 32.179 0.0 0.0 3.5858 0.0 0.0 0.0 651.3106666545134 651.3106666545134 18.19984993812689 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.2742275032520141 0.0 [DG]A 3.5858 + + 57 1 1.989 52088.3 1.0 2175 5108 7272 HBL1_DMSO_200M_050219_1,7285 HBL1_DMSO_200M_050219_1,7285,GDANFVYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7286 38.4 800.0 177080.0 25 0 18115.0 + 79 AAGPISERNQD 11 136 600.2869928738592 1198.5594328145182 2 600.2872192263603 MULTI CID FTMS 0 0 0 7272 204752.53125 1.0 0 0.0 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAGPISERNQD_ ENSG00000143368|ENST00000271628|SF3B4 93.44831873261192 0.0005410706345729 3 [PS]GP{I|L}SERNQD 11 2 + 100.76 0.0 0.0 8.4071 8.4071 82.373 0.0 0.0 0.0 5.527728354909968 0.4575749056067479 0.4575749056067479 0.4575749056067479 0 2.4361818737241734 0.958607314841775 0.9361818737241734 2.006625672816984 [PS]GP{I|L}SERNQD;[PS]GP{I|L}SERNEN;[PS]GP{I|L}SERGGQD;[PS]GP{I|L}SE[VG]NQD;[PS]GP{I|L}SERGGEN;[PS]GP{I|L}SE[VG]NEN;[PS]GP{I|L}SERN[AG]D;[PS]GP{I|L}SE[VG]GGQD;[PS]GP{I|L}SE[VG]GGEN;[PS]GP{I|L}SERGG[AG]D 8.4071;8.3689;7.6455;7.6455;7.6073;7.6073;7.4046;6.8864;6.8482;6.6455 -;-;-;-;-;-;-;-;-;- 4808 + 1 1.989 103567.6 0.949999988079071 2176 5108 7272 HBL1_DMSO_200M_050219_1,7286 HBL1_DMSO_200M_050219_1,7286,AAGPISERNQD True False AAGPISERNQD 38.400043 600.28721922636 1197122.375 7272.0 ENSG00000143368|ENST00000271628|SF3B4 10.16635831197103 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7287 38.403 154.0 647520.0 25 0 45007.0 37949 TMEILQLLL 9 104 358.547771910469 1072.621486331607 3 358.5480834841728 MULTI CID FTMS 0 0 0 7272 198055.015625 1.0 0 0.0 15 Unmodified _TMEILQLLL_ ENST00000487084.1_1_7:105517568-105517661:+|nuORF 5.230669730166228 0.7320841359114558 3 W 1 9 13.979 0.0 0.0 1.3033 0.0 0.0 868.5317626761367 0.0 868.5317626761367 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.3033 - 22 + 1 1.989 86874.9 1.0 2177 5108 7272 HBL1_DMSO_200M_050219_1,7287 HBL1_DMSO_200M_050219_1,7287,TMEILQLLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7288 38.411 402.0 201210.0 25 0 31063.0 + 38702 TTRAAPGTTL 10 116 494.7745114077708 987.5344698823416 2 494.7756225466728 MULTI CID FTMS 0 0 0 7272 152519.34375 0.1385463235604705 4 -0.3784866333007812 16 Unmodified _TTRAAPGTTL_ ENSG00000205592|ENST00000454784|MUC19;ENSG00000205592|ENST00000454784|MUC19;nc|ENSG00000205592|Q7Z5P9-2|MUC19;nc|ENSG00000205592|Q7Z5P9-2|MUC19 39.94969957227396 0.1580982266129622 3 TT{I|L} 3 7 36.995 0.0 0.0 3.7462 0.0 0.0 654.3477650373062 0.0 654.3477650373062 0.0 22.390690719683093 0.0 0.0 0 0.4247425010840047 0.0 0.805462187404089 0.0 + TT{I|L} 3.7462 + + 153 1 1.989 65426.3 1.0 2178 5108 7272 HBL1_DMSO_200M_050219_1,7288 HBL1_DMSO_200M_050219_1,7288,TTRAAPGTTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7289 38.425 800.0 123030.0 25 0 24254.0 -1 0 58 1007.0727002155118 3018.196271246736 3 1007.407580554485 MULTI CID FTMS 0 0 0 7272 111061.4375 0.6886589440145344 -1 0.0732841491699218 17 3 E 1 -1 6.9897 0.0 0.0 0.23159 0.0 0.0 2361.9675411228195 524.1619967096311 2886.1295378324508 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.23159 - 24 + 1 1.989 95590.6 0.4799999892711639 2179 5108 7272 HBL1_DMSO_200M_050219_1,7289 HBL1_DMSO_200M_050219_1,7289, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7290 38.431 341.0 203760.0 25 0 16355.0 31469 RPSQERGQSQG 11 109 615.3039275184126 1228.593302103625 2 615.3061401247978 MULTI CID FTMS 0 0 0 7272 121860.875 0.5169414042630869 -2 0.1299819946289062 18 Unmodified _RPSQERGQSQG_ ENST00000338779.10_1_16:70697408-70697537:-|nuORF 38.61474834105838 0.2337350513322792 3 {[SA]|[TG]}GP[WK]PSQSAN 12 10 + 76.25 0.0 0.0 6.2063 6.2063 76.81 0.0 0.0 0.0 0.324111657085254 9.098233696509112 0.324111657085254 0.324111657085254 0 1.424742501084005 0.7958800173440752 2.1989700043360187 0.3494850021680094 {[SA]|[TG]}GP[WK]PSQSAN;[PS]Q[WK]PSQSAN;{[QS]|[NT]}P[WK]PSQSAN;{[SA]|[TG]}GP[WK]PS[AG]SAN;[PS][AG][WK]PSQSAN;[PS]Q[WK]PS[AG]SAN;{[SA]|[TG]}GP[{I|L}P][C(Carbamidomethyl (C))K]QSAN;{[SA]|[TG]}GP{[RE]|[WV]}{[NV]|[RG]}QSAN;[PS]Q{[RE]|[WV]}{[NV]|[RG]}QSAN;[PS]Q[{I|L}P][C(Carbamidomethyl (C))K]QSAN 6.2063;6.1799;5.6537;5.4657;5.4369;5.4369;5.044;5.044;5.0177;5.0177 -;-;-;-;-;-;-;-;-;- 982 1 1.989 56514.0 1.0 2180 5108 7272 HBL1_DMSO_200M_050219_1,7290 HBL1_DMSO_200M_050219_1,7290,RPSQERGQSQG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7291 38.438 337.0 272510.0 25 0 25381.0 44868 YPPHVQKV 8 132 484.2717553203813 966.5289577075628 2 484.2695800662041 MULTI CID FTMS 0 0 0 7272 97574.859375 0.5720854021546858 40 -2.4477577209472656 19 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 19.438996006549623 0.6237395211498085 3 YP 2 6 41.454 0.0 0.0 4.2889 0.0 0.0 0.0 703.3885726834234 703.3885726834234 18.77758779335053 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + YP 4.2889 + + 290 + 1 1.989 72498.6 1.0 2181 5108 7272 HBL1_DMSO_200M_050219_1,7291 HBL1_DMSO_200M_050219_1,7291,YPPHVQKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7293 38.442 9.0 4427800.0 25 0 384140.0 + -1 TPMPMILP 8 62 458.2390040031423 914.4634550730846 2 458.2394897341728 MULTI CID FTMS 0 0 0 7292 4729555.5 0.4577537316726441 1 -0.0932884216308593 1 Oxidation (M) _TPMPM(Oxidation (M))ILP_ REV__nc|ENSG00000176046|O60356-2|NUPR1 22.4526382665184 0.5719518724627818 3 TPMG 4 -1 59.553 0.0 0.0 6.5123 0.0 0.0 0.0 525.2778686130583 525.2778686130583 49.31031895404267 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 TPMG 6.5123 - 57 + 1 1.991 38416.6 1.0 2182 5109 7292 HBL1_DMSO_200M_050219_1,7293 HBL1_DMSO_200M_050219_1,7293,TPMPMILP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7294 38.443 26.0 1825600.0 25 0 114740.0 44712 YPHDPPKV 8 85 476.748106647566 951.481660361932 2 476.7480346560478 MULTI CID FTMS 0 0 0 7292 542097.9375 0.1533751358323635 2 -0.1916236877441406 2 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 21.74664581756881 0.5868176546531598 3 {[WN]|[YH]}PDPPKV 8 2 + 28.37 0.0 0.0 2.9816 2.9816 80.218 0.0 0.0 0.0 5.292906663839997 4.913894895705866 4.913894895705866 11.23712505420023 0 0.4247425010840047 0.0 0.0 0.0 {[WN]|[YH]}PDPPKV;{[WN]|[YH]}PPDPKV 2.9816;1.8006 -;- 168 + 1 1.991 42471.6 1.0 2183 5109 7292 HBL1_DMSO_200M_050219_1,7294 HBL1_DMSO_200M_050219_1,7294,YPHDPPKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7295 38.444 18.0 2478800.0 25 0 326280.0 + 39483 VARPGGDTI 9 73 443.2430438518252 884.4715347704505 2 443.2431213259697 MULTI CID FTMS 0 0 0 7292 3350930.0 1.0 0 0.0 3 Unmodified _VARPGGDTI_ ENSG00000169567|ENST00000304043|HINT1 36.12702656103203 0.0967173616627612 3 {[VA]|[{I|L}G]}R[NP]DT{I|L} 8 2 + 59.672 0.0 0.0 6.7466 6.7466 87.095 0.0 0.0 0.0 17.03447425662482 55.06797838928741 17.03447425662482 6.409780573583319 0 1.305462187404089 1.3979400086720375 0.0 0.3252574989159953 {[VA]|[{I|L}G]}R[NP]DT{I|L};{[VA]|[{I|L}G]}RYYT{I|L};YY{[QV]|[N{I|L}]|[RA]|[KV]}VT{I|L} 6.7466;6.0219;3.0555 -;-;- 100 1 1.991 40144.2 1.0 2184 5109 7292 HBL1_DMSO_200M_050219_1,7295 HBL1_DMSO_200M_050219_1,7295,VARPGGDTI True True VARPGGDTI 38.444353 443.24312132597 16034344.0 7292.0 ENSG00000169567|ENST00000304043|HINT1 1.936429977416992 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7296 38.446 33.0 1721200.0 25 0 204780.0 + 24938 MPPPPPQGV 9 80 468.2362839438316 934.4580149544632 2 468.2364074587822 MULTI CID FTMS 0 0 0 7292 1804933.25 0.5630781171874409 -3 0.2250862121582031 4 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 42.96799951952854 0.0591636306142405 3 PPPPQR 6 4 28.703 0.0 0.0 3.0716 0.0 0.0 244.0883808820328 0.0 244.0883808820328 0.0 7.271212547196626 0.0 0.0 0 0.718765315847925 0.0 0.0 0.0 PPPPQR 3.0716 - 188 1 1.991 50667.6 1.0 2185 5109 7292 HBL1_DMSO_200M_050219_1,7296 HBL1_DMSO_200M_050219_1,7296,MPPPPPQGV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7297 38.447 32.0 2113700.0 25 0 220340.0 + 24260 MAPPPPRSV 9 81 476.2574249361268 950.5002969390536 2 476.2575256228447 MULTI CID FTMS 0 0 0 7292 1105076.0 0.1043298439210142 -4 0.3184814453125 5 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 12.240655878213236 0.5053430591993562 3 {[DS]|[MA]|[CV]|TT}PPDPPKV 9 3 + 53.126 0.0 0.0 5.5893 5.5893 81.834 0.0 0.0 0.0 38.6890321533884 7.931825014007217 7.931825014007217 4.771212547196626 0 0.3494850021680094 1.5228787452803376 0.0 0.0 {[DS]|[MA]|[CV]|TT}PPDPPKV;{[DS]|[MA]|[CV]|TT}PPPDPKV;{[DS]|[MA]|[CV]|TT}[YK]DPKV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}HDPPKV;[KP][{I|L}T]DPP[PS];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}HPDPKV;{[DS]|[MA]|[CV]|TT}{I|L}{I|L}[YN]KV;{[HG]|PP}K{[CP]|[EA]}{I|L}{I|L}[PS];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WY]PKV 5.5893;5.0873;2.7497;2.6211;2.3829;2.1192;1.4643;0.32684;0.29077 -;-;-;-;-;-;-;-;- 190 + 1 1.991 58841.0 1.0 2186 5109 7292 HBL1_DMSO_200M_050219_1,7297 HBL1_DMSO_200M_050219_1,7297,MAPPPPRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7298 38.448 70.0 750190.0 25 0 47862.0 + + 11227 DAPKAGQLEA 10 93 500.2589057173996 998.5032585015992 2 500.2593261599541 MULTI CID FTMS 0 0 0 7292 666407.5625 0.1883153575309039 3 -0.2833824157714844 6 Unmodified _GEQAKPAVEA_ nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4 20.41453444215458 0.5050059513928961 3 EG{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K 6 -1 42.981 0.0 0.0 4.3046 0.0 0.0 0.0 350.15961633853755 350.15961633853755 28.137874328056984 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3054621874040891 EG{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K 4.3046 - 305 + 1 1.991 45775.5 1.0 2187 5109 7292 HBL1_DMSO_200M_050219_1,7298 HBL1_DMSO_200M_050219_1,7298,GEQAKPAVEA False False DAPKAGQLEA 38.448353 500.259326159954 21785176.0 7292.0 nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4 2.738044579823812 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7299 38.45 75.0 1091400.0 25 0 114750.0 41139 VPAHGHPVI 9 79 309.51164590608 925.51310831844 3 309.5114318728447 MULTI CID FTMS 0 0 0 7292 639569.0625 1.0 0 0.0 7 Unmodified _VPAHGHPVI_ ENSG00000132467|ENST00000254803|UTP3 13.90604991867851 0.4602628045680013 3 [VP][R{M(Oxidation (M))|F}]AP 6 6 24.895 0.0 0.0 2.6898 0.0 0.0 0.0 255.1348178137073 255.1348178137073 6.42204288546608 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VP][R{M(Oxidation (M))|F}]AP 2.6898 - 78 1 1.991 71311.8 1.0 2188 5109 7292 HBL1_DMSO_200M_050219_1,7299 HBL1_DMSO_200M_050219_1,7299,VPAHGHPVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7300 38.453 142.0 617670.0 25 0 67983.0 + 33228 SFMKNTKSV 9 104 347.8515162854948 1040.5327194566844 3 347.8511840701103 MULTI CID FTMS 0 0 0 7292 445806.15625 1.0 0 0.0 8 Unmodified _SFMKNTKSV_ ENSG00000171206|ENST00000643721|TRIM8 23.78978130925829 0.2284941198415988 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}MKNTKSV 9 0 + 55.304 0.0 0.0 5.315 5.315 85.462 0.0 0.0 0.0 40.721134943024346 11.7035185535999 11.7035185535999 9.208187539523747 0 0.2887254899964357 2.0 0.2396518287104437 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}MKNTKSV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}MKGGTKSV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}MK{[TV]|[{I|L}S]}{[ET]|[MV]}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RK][{I|L}P]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 5.315;4.43;3.5549;1.1572 +;-;-;- + 202 + 1 1.991 76705.3 1.0 2189 5109 7292 HBL1_DMSO_200M_050219_1,7300 HBL1_DMSO_200M_050219_1,7300,SFMKNTKSV False True SFMKNTKSV 38.452935 347.85118407011 2458461.0 7292.0 ENSG00000171206|ENST00000643721|TRIM8 6.570769468943278 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7301 38.457 187.0 543930.0 25 0 66611.0 + 16743 KFIEKAQNM 9 130 554.7946229109283 1107.5746928886565 2 554.7956420779228 MULTI CID FTMS 0 0 0 7292 407331.1875 0.4288683954286582 -1 0.0951042175292968 9 Unmodified _KFIEKAQNM_ ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1 93.16586880292088 0.0136995152735431 3 K{M(Oxidation (M))|F}{I|L}EAKQNM 9 2 + 72.595 0.0 0.0 6.5544 6.5544 89.494 0.0 0.0 0.0 41.21520771172273 12.252684618815096 12.252684618815096 9.208187539523747 0 2.2302046884880937 0.0 0.0 1.4921276860725623 K{M(Oxidation (M))|F}{I|L}EAKQNM;K{M(Oxidation (M))|F}{I|L}EAK[AG]NM;K{M(Oxidation (M))|F}{I|L}EAKQGGM;K{M(Oxidation (M))|F}{I|L}E[NS]N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};K{M(Oxidation (M))|F}{I|L}E[WE]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};K{M(Oxidation (M))|F}{I|L}EQ[PA]{I|L}Y;K{M(Oxidation (M))|F}{I|L}EAK[C(Carbamidomethyl (C))N]V;K{M(Oxidation (M))|F}{I|L}EQAM{[QN]|[E{I|L}]|[KN]};K{M(Oxidation (M))|F}{I|L}EQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TV;K{M(Oxidation (M))|F}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}VN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.5544;5.723;5.4472;4.6933;4.5392;4.447;4.3024;4.2684;4.2478;4.2124 -;-;-;-;-;-;-;-;-;- 1872 + 1 1.991 81641.8 1.0 2190 5109 7292 HBL1_DMSO_200M_050219_1,7301 HBL1_DMSO_200M_050219_1,7301,KFIEKAQNM True True KFIEKAQNM 38.456543 554.795642077923 4419341.5 7292.0 nc|ENSG00000198522|Q9HCN4-3|GPN1;;ENSG00000198522|ENST00000610189|GPN1;;nc|ENSG00000198522|Q9HCN4-2|GPN1;;nc|ENSG00000198522|Q9HCN4-4|GPN1;;nc|ENSG00000198522|Q9HCN4-5|GPN1 7.465805212656657 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7302 38.459 133.0 533670.0 25 0 69620.0 + 25032 MPPKAGQTI 9 77 471.7575454630159 0 471.7576171755791 PEAK CID FTMS 0 0 0 7292 393174.59375 0.7680117079542975 -19 1.0957145690917969 10 Unmodified _MPSRPELL_ nc|ENSG00000170322|Q6P4R8-3|NFRKB;ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB 28.486842064014134 0.2575685520298453 3 E 1 7 10.242 0.0 0.0 1.0879 0.0 0.0 470.2357502504474 339.2041414850219 809.4398917354694 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + E 1.0879 + + 105 + 1 1.991 62746.7 1.0 2191 5109 7292 HBL1_DMSO_200M_050219_1,7302 HBL1_DMSO_200M_050219_1,7302,MPSRPELL False False MPPKAGQTI 38.459247 471.757617175579 59587338.0 7292.0 nc|ENSG00000170322|Q6P4R8-3|NFRKB;;ENSG00000170322|ENST00000682444|NFRKB;;nc|ENSG00000170322|Q6P4R8-2|NFRKB 3.5855166912078857 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7303 38.463 199.0 435500.0 25 0 24488.0 + 41140 VPAHGHPVI 9 109 463.7640130476173 925.5134731620346 2 463.7639648318291 MULTI CID FTMS 0 0 0 7292 381531.1875 1.0 0 0.0 11 Unmodified _VPAHGHPVI_ ENSG00000132467|ENST00000254803|UTP3 57.47134341890925 0.0274820932774257 3 [VP]AH{[HG]|PP}PV{I|L} 9 0 + 41.173 0.0 0.0 4.4486 4.4486 84.581 0.0 0.0 0.0 11.58924985774086 16.64796394658581 11.58924985774086 14.027703641291389 0 1.166386562212267 2.0 0.0 0.0 + + [VP]AH{[HG]|PP}PV{I|L};[PA]H{[HG]|PP}VPV{I|L};[PA]H{[HG]|PP}PVV{I|L};[PA]VH{[HG]|PP}PV{I|L};[PA]HV{[HG]|PP}PV{I|L};{[HG]|PP}[HA]PVPV{I|L};{[HG]|PP}[HA]PPVV{I|L};{[HG]|PP}[{I|L}P]{[HG]|PP}PV{I|L};{[SA]|[TG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RH]V{I|L};{[HG]|PP}[R{I|L}][MT]V{I|L} 4.4486;2.933;2.7993;2.6729;2.5235;1.9722;1.8385;0.61724;0.14806;0.0028406 +;-;-;-;-;-;-;-;-;- + 466 1 1.991 68159.4 1.0 2192 5109 7292 HBL1_DMSO_200M_050219_1,7303 HBL1_DMSO_200M_050219_1,7303,VPAHGHPVI True True VPAHGHPVI 38.463058 463.763964831829 2701533.5 7292.0 ENSG00000132467|ENST00000254803|UTP3 2.2674110730489097 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7304 38.467 210.0 923810.0 25 0 72471.0 -1 0 159 335.223774784051 668.432996634902 2 335.2235900759697 MULTI CID FTMS 0 0 0 7292 328371.3125 0.8339014423450829 -1 0.0951042175292968 12 3 GP{I|L}RKV 6 -1 + 83.039 0.0 0.0 12.423 12.423 99.128 0.0 0.0 0.0 45.245472881770965 16.580306233405295 16.580306233405295 37.14964095499696 0 1.1307196863200843 2.0 0.0 1.2346368802282015 GP{I|L}RKV;[PG]{I|L}RKV;V[PA]RKV;GVKR[{I|L}P];VGKR[{I|L}P];VKGR[{I|L}P] 12.423;6.8652;5.0899;4.9989;4.2177;1.9394 -;-;-;-;-;- 105 + 1 1.991 157675.5 1.0 2193 5109 7292 HBL1_DMSO_200M_050219_1,7304 HBL1_DMSO_200M_050219_1,7304, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7305 38.472 272.0 210710.0 25 0 11315.0 + 44985 YPRSGTGQTI 10 99 540.2773607879016 1078.540168642603 2 540.2776367068291 MULTI CID FTMS 0 0 0 7292 314210.375 0.9128693587845612 2 -0.1916236877441406 13 Unmodified _YPRSGTGQTI_ ENSG00000164031|ENST00000442697|DNAJB14;nc|ENSG00000164031|Q8TBM8-2|DNAJB14 32.037481411007896 0.2488723560272515 3 [{I|L}T]EPV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]T{I|L} 9 8 + 39.292 0.0 0.0 3.6431 3.6431 76.004 0.0 0.0 0.0 4.282118526775143 9.114999749340392 4.282118526775143 5.0 0 1.774227503252014 1.6989700043360187 0.0 0.0 [{I|L}T]EPV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]T{I|L};[{I|L}T]EP{[QD]|[EN]|[WG]|[KD]|[RS]}YT{I|L};[{I|L}T][C(Carbamidomethyl (C))R][C(Carbamidomethyl (C))R]T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}]TGQT{I|L};[PS]QAR[SG]YT{I|L};{[QG]|[NA]}[TP]R[SG]YT{I|L};{[QG]|[NA]}{[NV]|[RG]}{[RE]|[WV]}YT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}]TG[AG]T{I|L} 3.6431;3.1795;2.5469;2.1348;1.9594;1.6606;1.5185;1.2811 -;-;-;-;-;-;-;- 300 1 1.991 50348.9 1.0 2194 5109 7292 HBL1_DMSO_200M_050219_1,7305 HBL1_DMSO_200M_050219_1,7305,YPRSGTGQTI False True YPRSGTGQTI 38.472068 540.277636706829 4117465.25 7292.0 nc|ENSG00000164031|Q8TBM8-2|DNAJB14;;ENSG00000164031|ENST00000442697|DNAJB14 5.700902779897054 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7306 38.485 752.0 124690.0 25 0 6235.1 -1 FRCQCPAGGAF 11 122 635.7759483158609 1269.5373436985217 2 635.7763549685478 MULTI CID FTMS 0 0 0 7292 278388.40625 0.3884416105056623 2 -0.1916236877441406 14 2 Carbamidomethyl (C) _FRC(Carbamidomethyl (C))QC(Carbamidomethyl (C))PAGGAF_ ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3 18.1463463914782 0.6576820063886638 3 [NP]HDEAQQNA{M(Oxidation (M))|F} 11 -1 + 90.632 0.0 0.0 7.139 7.139 87.515 0.0 0.0 0.0 5.778876285216896 16.575773191777927 5.778876285216896 5.778876285216896 0 0.805462187404089 0.9208187539523752 0.7134679910804405 0.805462187404089 [NP]HDEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}G[NS]GYQQNA{M(Oxidation (M))|F};[AG]GE{M(Oxidation (M))|F}MAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}E{M(Oxidation (M))|F}MAQQNA{M(Oxidation (M))|F};[AG]N[NS]GYQQNA{M(Oxidation (M))|F};[AG]GG[NS]GYQQNA{M(Oxidation (M))|F};[NP]HDEAQQGGA{M(Oxidation (M))|F};[NP]HDEAQ[AG]NA{M(Oxidation (M))|F};[NP]HDEA[AG]QNA{M(Oxidation (M))|F};[HD][NP]EAQQNA{M(Oxidation (M))|F} 7.139;6.6838;6.6487;6.5398;6.509;6.4952;6.4199;6.4199;6.4199;6.3734 -;-;-;-;-;-;-;-;-;- 3600 1 1.991 73368.6 1.0 2195 5109 7292 HBL1_DMSO_200M_050219_1,7306 HBL1_DMSO_200M_050219_1,7306,FRCQCPAGGAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7307 38.488 136.0 458350.0 25 0 136270.0 + 38731 TVADHIQKV 9 77 505.7850307582652 0 505.7851440310478 PEAK CID FTMS 0 0 0 7292 277512.90625 1.0 0 0.0 15 Unmodified _TVADHIQKV_ ENSG00000181789|ENST00000314797|COPG1 18.1463463914782 0.2188250594445807 3 KQ{I|L} 3 8 19.693 0.0 0.0 1.9506 0.0 0.0 317.1940716710241 320.1009615533813 637.2950332244054 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 KQ{I|L} 1.9506 - 105 + 1 1.991 56892.1 1.0 2196 5109 7292 HBL1_DMSO_200M_050219_1,7307 HBL1_DMSO_200M_050219_1,7307,TVADHIQKV False True TVADHIQKV 38.487849 505.785144031048 1544681.0 7292.0 ENSG00000181789|ENST00000314797|COPG1 3.8961662451426182 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7308 38.493 306.0 446810.0 25 0 28805.0 + 32649 SCDAANRSKL 10 134 532.7599117126252 1063.5052704920504 2 532.7596923708916 MULTI CID FTMS 0 0 0 7292 246285.625 0.6763347956528605 -1 0.0951042175292968 16 Unmodified _SCDAANRSKL_ REV__ENSG00000215421|ENST00000299687|ZNF407;REV__nc|ENSG00000215421|Q9C0G0-2|ZNF407;REV__nc|ENSG00000215421|Q9C0G0-3|ZNF407 10.073929032068715 0.6785112666868882 3 [YC(Carbamidomethyl (C))][PG]PTRT{I|L} 9 -1 + 16.99 0.0 0.0 1.5975 1.5975 78.75 0.0 0.0 0.0 3.925449767853312 4.682861006456264 3.925449767853312 11.760912590556812 0 0.0 0.0 0.2887254899964357 0.0 [YC(Carbamidomethyl (C))][PG]PTRT{I|L};[YC(Carbamidomethyl (C))][PG]P{[ET]|[MV]}K{I|L} 1.5975;0.49168 -;- 275 + 1 1.991 107249.1 1.0 2197 5109 7292 HBL1_DMSO_200M_050219_1,7308 HBL1_DMSO_200M_050219_1,7308,SCDAANRSKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7309 38.5 348.0 386200.0 25 0 46599.0 + 3327 AYLTAATH 8 132 424.2189706459136 0 424.2193786501884 PEAK CID FTMS 0 0 0 7292 244224.0 0.9486967020539722 -1 0.0951042175292968 17 Unmodified _AYLTAATH_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 78.44472497914707 1.3709042962774928e-05 3 {I|L}TAAT 5 3 41.983 0.0 0.0 4.96 0.0 0.0 234.1014129680985 152.04682336978752 386.148236337886 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 1.4802046884880935 0.0 + {I|L}TAAT 4.96 + + 99 + 1 1.991 106590.6 1.0 2198 5109 7292 HBL1_DMSO_200M_050219_1,7309 HBL1_DMSO_200M_050219_1,7309,AYLTAATH True True AYLTAATH 38.499739 424.219378650188 2180869.0 7292.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 7.534919738769531 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7310 38.515 797.0 560140.0 25 0 72846.0 + 24131 LYQDTHQEY 9 185 598.7636099985089 1195.5126670638176 2 598.7647582888603 MULTI CID FTMS 0 0 0 7292 247007.359375 0.2382360298955608 -1 0.0951042175292968 18 Unmodified _LYQDTHQEY_ ENSG00000164151|ENST00000296564|ICE1;ICE1|p.Y725Lfs*4|1|0.29|ENSG00000164151|chr5:5461508-5461508|A/-|frameshift_variant 107.09958533191995 0.0072323465566536 3 {I|L}YQ{M(Oxidation (M))|F}YQD 7 5 95.059 0.0 0.0 7.9513 0.0 0.0 0.0 235.0840548151 235.0840548151 32.300436007519885 0.0 0.0 0.0 0 0.6643943297944485 2.0 1.9654243254584296 1.6549471895720984 {I|L}YQ{M(Oxidation (M))|F}YQD 7.9513 - 30956 + 1 1.991 318247.7 1.0 2199 5109 7292 HBL1_DMSO_200M_050219_1,7310 HBL1_DMSO_200M_050219_1,7310,LYQDTHQEY True True LYQDTHQEY 38.514695 598.76475828886 5878277.0 7292.0 ENSG00000164151|ENST00000296564|ICE1;;ICE1|p.Y725Lfs*4|1|0.29|ENSG00000164151|chr5:5461508-5461508|A/-|frameshift_variant 7.83716615041097 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7311 38.529 800.0 187270.0 25 0 18269.0 + 43040 VYEEATFGCY 10 122 591.2470432807571 1180.479533628314 2 591.2474853396416 MULTI CID FTMS 0 0 0 7292 152587.234375 0.671729015998096 -2 0.1683883666992187 19 Unmodified _VYEEATFGCY_ REV__ENST00000477532.5_1_7:117876918-117879963:+|nuORF 10.823927491677226 0.6659270209832991 3 [YV]P 3 -1 31.21 0.0 0.0 2.6439 0.0 0.0 0.0 818.2687471979124 818.2687471979124 13.260978122791933 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [YV]P 2.6439 - 576 + 1 1.991 116400.0 0.699999988079071 2200 5109 7292 HBL1_DMSO_200M_050219_1,7311 HBL1_DMSO_200M_050219_1,7311,VYEEATFGCY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7312 38.531 113.0 778510.0 25 0 85963.0 + 24819 MPKKDPVKI 9 118 352.54763696832674 1054.6210815051802 3 352.5474426150322 MULTI CID FTMS 0 0 0 7292 155887.59375 0.2113399821248272 -1 0.0951042175292968 20 Unmodified _MPKKDPVKI_ ENSG00000101898|ENST00000394552|MCTS2;ENSG00000232119|ENST00000371317|MCTS1;ENST00000479096.1_1_20:30135258-30136578:+|nuORF;ENST00000487133.1_1_X:119739298-119742228:+|nuORF;nc|ENSG00000232119|Q9ULC4-2|MCTS1;nc|ENSG00000232119|Q9ULC4-3|MCTS1 17.11289562659939 0.3734572693229295 3 [VP]KDKPK{I|L}M 9 5 + 48.879 0.0 0.0 4.6347 4.6347 75.076 0.0 0.0 0.0 9.03089986991943 14.97302484056646 9.03089986991943 2.390690719683093 0 0.0 1.3010299956639813 0.3807196863200844 0.0 [VP]KDKPK{I|L}M;[VP]K[SG]VPK{I|L}M;[KP]VDKPK{I|L}M;[VP]KDKKP{I|L}M;[KP]V[SG]VPK{I|L}M;[VP]K[SG]VKP{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}[KP]VPK{I|L}M;[KP]VDKKP{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}[VP]KPK{I|L}M;[KP]V[SG]VKP{I|L}M 4.6347;4.4081;3.7784;3.7029;3.5517;3.4762;3.4641;2.8466;2.8176;2.6199 -;-;-;-;-;-;-;-;-;- 327 1 1.991 75218.8 1.0 2201 5109 7292 HBL1_DMSO_200M_050219_1,7312 HBL1_DMSO_200M_050219_1,7312,MPKKDPVKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7314 38.535 46.0 1212700.0 25 0 151100.0 27262 PHDLLWAT 8 77 318.16782282383326 951.4816390717 3 318.1675903201103 MULTI CID FTMS 0 0 0 7313 765528.625 0.0608947272547209 3 -0.3252983093261719 1 Unmodified _PHDLLWAT_ ENSG00000205356|ENST00000447648|TECPR1;nc|ENSG00000205356|Q7Z6L1-2|TECPR1;nc|ENSG00000205356|Q7Z6L1-3|TECPR1;nc|ENSG00000205356|Q7Z6L1-4|TECPR1 5.760428011301431 0.7893668129297577 3 [VS]ME 4 8 15.15 0.0 0.0 1.5923 0.0 0.0 0.0 502.2672890563279 502.2672890563279 4.041068762088997 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [VS]ME 1.5923 - 59 1 1.991 53083.6 1.0 2202 5110 7313 HBL1_DMSO_200M_050219_1,7314 HBL1_DMSO_200M_050219_1,7314,PHDLLWAT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7315 38.536 30.0 1835100.0 25 0 259070.0 + 41207 VPESSGRYV 9 57 497.25365778828825 992.4927626433764 2 497.2537109255791 MULTI CID FTMS 0 0 0 7313 1804695.375 0.7502225325697786 2 -0.190093994140625 2 Unmodified _VPESSGRYV_ ENSG00000132017|ENST00000254337|DCAF15;ENST00000588523.1_1_19:14071181-14071804:+|nuORF 29.84058131909904 0.1515068451768857 3 VPESS 5 4 66.925 0.0 0.0 6.7431 0.0 0.0 0.0 490.2419832818969 490.2419832818969 39.47743773147742 0.0 0.0 0.0 0 0.6747425010840047 1.5228787452803376 0.8494850021680094 0.0 + VPESS 6.7431 + + 75 + 1 1.991 49277.6 1.0 2203 5110 7313 HBL1_DMSO_200M_050219_1,7315 HBL1_DMSO_200M_050219_1,7315,VPESSGRYV False True VPESSGRYV 38.536465 497.253710925579 86858334.0 7313.0 ENSG00000132017|ENST00000254337|DCAF15;;ENST00000588523.1_1_19:14071181-14071804:+|nuORF 9.328283150990805 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7316 38.538 76.0 982700.0 25 0 121160.0 + 33251 SFPASSGVSH 10 82 488.2303025289275 974.446052124655 2 488.2307006716728 MULTI CID FTMS 0 0 0 7313 715921.625 0.4940956951082018 22 -1.3278923034667969 3 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 34.40172386719151 0.2166836008404837 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 66.471 0.0 0.0 6.8214 6.8214 82.465 0.0 0.0 0.0 37.139472062827394 16.53212513775344 16.53212513775344 2.552725051033065 0 0.3807196863200844 2.0 0.4247425010840047 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC{[QV]|[N{I|L}]|[RA]|[KV]}SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PA{M(Oxidation (M))|F}[RN]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP][MN]SH;[PA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}APDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WE][RN]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[MS]|[{M(Oxidation (M))|F}A]}P[RN]H;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}CAPDT 6.8214;6.5594;5.7677;5.4588;4.7341;4.1746;4.1121;3.6215;3.4808;3.039 +;-;-;-;-;-;-;-;-;- + 272 + 1 1.991 61325.4 1.0 2204 5110 7313 HBL1_DMSO_200M_050219_1,7316 HBL1_DMSO_200M_050219_1,7316,SFPASSGVSH False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7317 38.541 114.0 526970.0 25 0 73130.0 + 8877 FAEDGARTV 9 88 483.2375732379608 964.4605935427217 2 483.2381469607353 MULTI CID FTMS 0 0 0 7313 295669.5625 0.6611966134504579 12 -1.1475486755371094 4 Unmodified _FAEDGARTV_ ENSG00000157240|ENST00000287934|FZD1 16.149105407346934 0.3995459350917656 3 {[MS]|[{M(Oxidation (M))|F}A]}R{[QD]|[EN]|[WG]|[KD]|[RS]}EAE 8 6 + 39.385 0.0 0.0 4.0837 4.0837 78.449 0.0 0.0 0.0 3.199849938126889 22.174165578762484 3.199849938126889 6.409780573583319 0 0.0 1.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}R{[QD]|[EN]|[WG]|[KD]|[RS]}EAE;{[MS]|[{M(Oxidation (M))|F}A]}RWWAE;{M(Oxidation (M))|F}AE{[QD]|[EN]|[WG]|[KD]|[RS]}[VG]S{I|L};{M(Oxidation (M))|F}AE{[QD]|[EN]|[WG]|[KD]|[RS]}[VG]TV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KP][YT]AE;[KT]{[TV]|[{I|L}S]}{[MG]|[TS]}EAE;{[MS]|[{M(Oxidation (M))|F}A]}[QT][W{I|L}]AE;[VP]NH{[VA]|[{I|L}G]}EAE;{[TV]|[{I|L}S]}[KT]{[MG]|[TS]}EAE;{M(Oxidation (M))|F}AE{[VA]|[{I|L}G]}[KP]{[CT]|[{M(Oxidation (M))|F}G]} 4.0837;3.4191;2.4053;2.3796;1.8702;1.8496;1.7269;1.2248;1.0685;0.81275 -;-;-;-;-;-;-;-;-;- 209 1 1.991 53575.5 1.0 2205 5110 7313 HBL1_DMSO_200M_050219_1,7317 HBL1_DMSO_200M_050219_1,7317,FAEDGARTV False True FAEDGARTV 38.540592 483.238146960735 1934522.125 7313.0 ENSG00000157240|ENST00000287934|FZD1 4.407614390055339 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7318 38.545 246.0 359520.0 25 0 40000.0 + + 40288 AYQEQAKGL 9 125 504.2642211781306 0 504.2638732790947 PEAK CID FTMS 0 0 0 7313 261453.5 0.6826660434979998 -1 0.0932884216308593 5 Unmodified _VGVFIEAGCI_ ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR 28.486842064014134 0.2299152863319618 3 QE 2 -1 20.406 0.0 0.0 2.0274 0.0 0.0 234.10392956153612 512.2847994440061 746.3887290055422 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.3807196863200844 0.5 QE 2.0274 - 41 + 1 1.991 71456.1 1.0 2206 5110 7313 HBL1_DMSO_200M_050219_1,7318 HBL1_DMSO_200M_050219_1,7318,VGVFIEAGCI False False AYQEQAKGL 38.545195 504.263873279095 2033599.75 7313.0 ENSG00000116984|ENST00000366577|MTR;;nc|ENSG00000116984|Q99707-2|MTR 6.073379039764404 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7319 38.548 143.0 458480.0 25 0 52546.0 + 4901 DGKQQVQVV 9 112 500.775352885321 999.5361528374422 2 500.7775146365166 MULTI CID FTMS 0 0 0 7313 254546.875 0.0905707342813103 -2 0.1883926391601562 6 Unmodified _DGKQQVQVV_ ENSG00000068796|ENST00000407818|KIF2A;ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000068796|O00139-1|KIF2A;nc|ENSG00000068796|O00139-2|KIF2A;nc|ENSG00000068796|O00139-5|KIF2A;nc|ENSG00000068796|O00139|KIF2A;nc|ENSG00000142945|Q99661-2|KIF2C 52.268347100219714 0.0353964759249114 3 {[QV]|[N{I|L}]|[RA]|[KV]}[NS]QVQVV 9 4 + 55.881 0.0 0.0 5.5907 5.5907 74.87 0.0 0.0 0.0 1.8563657696191167 9.577570906191896 1.8563657696191167 0.3515843128370477 0 0.7429928190999391 1.0 0.6237125054200234 1.385151878060192 {[QV]|[N{I|L}]|[RA]|[KV]}[NS]QVQVV;{[QV]|[N{I|L}]|[RA]|[KV]}VDDVQVV;[AG]V[NS]QVQVV;{[QN]|[E{I|L}]|[KN]}WQVQVV;[AG]Q[TA]QVQVV;{[SA]|[TG]}[RN]QVQVV;{[DA]|[EG]}[RV]DVQVV;[AG]VVDDVQVV;{[QV]|[N{I|L}]|[RA]|[KV]}[NS][AG]VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}[NS]QV[AG]VV 5.5907;5.5555;5.405;5.2157;4.9788;4.7651;4.7593;4.7145;4.6694;4.6694 -;-;-;-;-;-;-;-;-;- 702 1 1.991 53649.5 1.0 2207 5110 7313 HBL1_DMSO_200M_050219_1,7319 HBL1_DMSO_200M_050219_1,7319,DGKQQVQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7320 38.555 384.0 368640.0 25 0 38094.0 + 1342 AKLVGLWEA 9 162 493.7852269259438 985.5559009186876 2 493.7852355837822 MULTI CID FTMS 0 0 0 7313 237444.390625 0.5437541578309777 -2 0.1883926391601562 7 Unmodified _AKLVGLWEA_ REV__ENSG00000184634|ENST00000374080|MED12;REV__nc|ENSG00000184634|Q93074-2|MED12;REV__nc|ENSG00000184634|Q93074-3|MED12 34.40172386719151 0.1061884637610825 3 KA{I|L} 3 -1 36.555 0.0 0.0 3.709 0.0 0.0 0.0 670.3169599311326 670.3169599311326 11.89983094072403 0.0 0.0 0.0 0 1.0356668758921828 0.0 0.0 0.0 KA{I|L} 3.709 - 1115 + 1 1.991 109526.4 1.0 2208 5110 7313 HBL1_DMSO_200M_050219_1,7320 HBL1_DMSO_200M_050219_1,7320,AKLVGLWEA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7321 38.561 341.0 261370.0 25 0 19678.0 + 22702 LQETYSKQV 9 143 548.2881456473707 1094.5617383615413 2 548.2889282107353 MULTI CID FTMS 0 0 0 7313 220621.859375 0.7454158122682618 -1 0.0932884216308593 8 Unmodified _LQETYSKQV_ chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C;chr20:45814470-45815390|47|12.11|0.65|4.22|+|ENST00000335046|UBE2C,UBE2C;chr20:45815540-45815854|47|12.17|0.56|4.44|+|ENST00000617055|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-2|UBE2C;nc|ENSG00000175063|O00762-3|UBE2C;nc|ENSG00000175063|O00762-4|UBE2C 41.95555342248728 0.0647214845423414 3 [Q{I|L}]ETYSKQV 9 0 + 43.391 0.0 0.0 3.9642 3.9642 71.424 0.0 0.0 0.0 10.510299956639804 1.3717319302531052 1.3717319302531052 1.3717319302531052 0 0.9247425010840048 0.8239087409443188 0.5866968715561641 0.6203715150305281 + + [Q{I|L}]ETYSKQV;[Q{I|L}]ETYSKN{I|L};[Q{I|L}]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}SKQV;[Q{I|L}]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}SKN{I|L};[Q{I|L}]ETHQV[Q{I|L}];EQ{I|L}TYSKQV;[Q{I|L}]ETYSK[AG]V;EQ{I|L}TYSKN{I|L};[Q{I|L}]ETYSKGG{I|L};[Q{I|L}]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}SK[AG]V 3.9642;3.8389;3.6123;3.487;3.1458;3.004;2.904;2.8786;2.7787;2.5521 +;-;-;-;-;-;-;-;-;- + 840 + 1 1.991 73493.7 1.0 2209 5110 7313 HBL1_DMSO_200M_050219_1,7321 HBL1_DMSO_200M_050219_1,7321,LQETYSKQV True True LQETYSKQV 38.561115 548.288928210735 2943425.5 7313.0 ENSG00000175063|ENST00000356455|UBE2C;;chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C;;nc|ENSG00000175063|O00762-4|UBE2C;;nc|ENSG00000175063|O00762-2|UBE2C;;chr20:45815540-45815854|47|12.17|0.56|4.44|+|ENST00000617055|UBE2C,UBE2C;;nc|ENSG00000175063|O00762-3|UBE2C;;chr20:45814470-45815390|47|12.11|0.65|4.22|+|ENST00000335046|UBE2C,UBE2C 5.350806554158528 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7322 38.569 427.0 261820.0 25 0 20605.0 + 12039 GQDINPQRV 9 130 513.7699101231923 1025.5252673131845 2 513.7707397341728 MULTI CID FTMS 0 0 0 7313 199751.40625 0.2506524879084161 -3 0.2616767883300781 9 Unmodified _GQDINPQRV_ ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;ENST00000557366.5_1_14:68270819-68282710:-|nuORF;ENST00000557407.1_1_14:68264347-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-4|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 49.93300154707207 0.0405168250806675 3 {[QG]|[NA]}VT{I|L}N{I|L}N 8 6 49.43 0.0 0.0 4.8199 0.0 0.0 0.0 183.03512994429693 183.03512994429693 26.921305798057134 0.0 0.0 0.0 0 1.3182503180159344 0.3010299956639812 0.0 1.5356668758921828 {[QG]|[NA]}VT{I|L}N{I|L}N 4.8199 - 1112 1 1.991 90464.6 1.0 2210 5110 7313 HBL1_DMSO_200M_050219_1,7322 HBL1_DMSO_200M_050219_1,7322,GQDINPQRV True True GQDINPQRV 38.568736 513.770739734173 6997676.5 7313.0 ENST00000557407.1_1_14:68264347-68282710:-|nuORF;;ENST00000557366.5_1_14:68270819-68282710:-|nuORF;;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;;nc|ENSG00000072121|Q68DK2-4|ZFYVE26;;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;;ENSG00000072121|ENST00000347230|ZFYVE26;;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 6.522105693817139 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7323 38.583 800.0 169870.0 25 0 5936.9 -1 0 108 674.5133478642969 3367.530356988484 5 674.7135497927666 MULTI CID FTMS 0 0 0 7313 196332.203125 0.32798461101546 -2 0.1883926391601562 10 3 GTWG 4 -1 24.769 0.0 0.0 0.73553 0.0 0.0 1647.7677254619646 1315.5689560267515 2963.336681488716 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.8494850021680094 0.0 GTWG 0.73553 - 1451 + 1 1.991 103995.0 0.8299999833106995 2211 5110 7313 HBL1_DMSO_200M_050219_1,7323 HBL1_DMSO_200M_050219_1,7323, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7324 38.587 246.0 329010.0 25 0 16146.0 + 34773 SQDEIKQEV 9 119 538.2671658299271 1074.519778726654 2 538.2670165896416 MULTI CID FTMS 0 0 0 7313 185833.171875 0.4660073466748949 -2 0.1883926391601562 11 Unmodified _SQDEIKQEV_ ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-2|DNA2;nc|ENSG00000138346|P51530-3|DNA2;nc|ENSG00000138346|P51530-4|DNA2 71.70789743142352 0.0204387454931768 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GN[YN]SA 8 8 36.208 0.0 0.0 3.3697 0.0 0.0 0.0 231.1590259611181 231.1590259611181 -0.3086961830060488 0.0 -0.3086961830060488 0.0 0 0.0 2.0 1.309894379144197 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GN[YN]SA 3.3697 - 619 1 1.991 67282.1 1.0 2212 5110 7313 HBL1_DMSO_200M_050219_1,7324 HBL1_DMSO_200M_050219_1,7324,SQDEIKQEV True True SQDEIKQEV 38.587176 538.267016589642 5215378.5 7313.0 nc|ENSG00000138346|P51530-3|DNA2;;ENSG00000138346|ENST00000358410|DNA2;;nc|ENSG00000138346|P51530-4|DNA2;;nc|ENSG00000138346|P51530-2|DNA2 5.558388710021973 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7325 38.601 800.0 78587.0 25 0 7289.1 -1 0 66 1047.4762429954365 3139.4068995865096 3 1047.811328113079 MULTI CID FTMS 0 0 0 7313 126158.1015625 0.9671933524581012 1 -0.0983352661132812 12 3 TWG[RD]QQQK 9 -1 18.874 0.0 0.0 0.60119 0.0 0.0 1476.6683833002198 532.2178438775999 2008.88622717782 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TWG[RD]QQQK 0.60119 - 91 + 1 1.991 49707.6 0.5199999809265137 2213 5110 7313 HBL1_DMSO_200M_050219_1,7325 HBL1_DMSO_200M_050219_1,7325, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7326 38.608 412.0 157490.0 25 0 9665.6 -1 MTPQFTPLP 9 112 524.2604150289292 1046.5062771246585 2 524.7617675662041 MULTI CID FTMS 0 0 0 7313 111728.515625 0.3851096448662316 -3 0.2616767883300781 13 Oxidation (M) _M(Oxidation (M))TPQFTPLP_ ENSG00000197563|ENST00000640252|PIGN 21.74664581756881 0.2544899275067181 3 {I|L}ECQ[QA]EKV 9 -1 + 24.881 0.0 0.0 2.3776 2.3776 80.111 0.0 0.0 0.0 10.855928003799413 1.5874472635006676 1.5874472635006676 14.767058875759377 0 0.5858955865873612 0.0 0.6203715150305281 0.6989700043360187 {I|L}ECQ[QA]EKV;[YQ]A[Y{M(Oxidation (M))|F}]EKV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[Y{M(Oxidation (M))|F}]EKV;[YQ]A[YR][{M(Oxidation (M))|F}T]V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[YR][{M(Oxidation (M))|F}T]V 2.3776;0.96649;0.67884;0.42624;0.13859 -;-;-;-;- 190 + 1 1.991 54725.5 1.0 2214 5110 7313 HBL1_DMSO_200M_050219_1,7326 HBL1_DMSO_200M_050219_1,7326,MTPQFTPLP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7327 38.624 800.0 184740.0 25 0 13040.0 + 2398 AQPFRHHY 8 174 528.2622636404141 0 528.2603027224541 PEAK CID FTMS 0 0 0 7313 111077.9140625 1.0 0 0.0 14 Unmodified _AQPFRHHY_ REV__ENSG00000174106|ENST00000308330|LEMD3;REV__ENST00000539442.1_1_12:65639428-65640102:+|nuORF 8.593279151180031 0.5573742999696857 3 KMPKDVP 7 -1 12.902 0.0 0.0 1.2235 0.0 0.0 130.98650854423153 125.0723818414672 256.0588903856987 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 KMPKDVP 1.2235 - 395 + 1 1.991 119005.1 0.6100000143051147 2215 5110 7313 HBL1_DMSO_200M_050219_1,7327 HBL1_DMSO_200M_050219_1,7327,AQPFRHHY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7328 38.629 301.0 708370.0 25 0 94164.0 + 15315 IPLGPRKKI 9 203 341.23397546254034 1020.6800969878212 3 341.2336303591728 MULTI CID FTMS 0 0 0 7313 98360.5078125 1.0 0 0.0 15 Unmodified _IPLGPRKKI_ ENSG00000085788|ENST00000397166|DDHD2;ENSG00000107651|ENST00000369075|SEC23IP;nc|ENSG00000085788|O94830-2|DDHD2;nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP 7.608950283845883 0.6490595679007971 3 {I|L}P{I|L} 3 6 47.703 0.0 0.0 4.6737 0.0 0.0 0.0 694.4380901943387 694.4380901943387 36.86558212473503 0.0 0.0 0.0 0 0.1505149978319906 2.0 0.0 0.0 + {I|L}P{I|L} 4.6737 + + 75 + 1 1.991 172534.4 1.0 2216 5110 7313 HBL1_DMSO_200M_050219_1,7328 HBL1_DMSO_200M_050219_1,7328,IPLGPRKKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7330 38.634 9.7 6069100.0 25 0 725930.0 + 21979 LPPPAAKTV 9 78 447.2760150369352 892.5374771406705 2 447.2763549685478 MULTI CID FTMS 0 0 0 7329 6345473.0 0.9713105883483868 2 -0.2269630432128906 1 Unmodified _LPPPAAKTV_ ENSG00000168894|ENST00000306368|RNF181;ENST00000461845.1_1_2:85822886-85823939:+|nuORF 24.99096001346401 0.2132109383330889 3 {I|L}PP 3 6 50.445 0.0 0.0 5.6519 0.0 0.0 0.0 582.3265474908811 582.3265474908811 39.9607625286837 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PP 5.6519 + + 92 + 1 1.993 52021.2 1.0 2217 5111 7329 HBL1_DMSO_200M_050219_1,7330 HBL1_DMSO_200M_050219_1,7330,LPPPAAKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7331 38.635 32.0 1047500.0 25 0 61480.0 27043 PEQNDRTPL 9 66 535.2677072926216 1068.520861652043 2 535.2679321169853 MULTI CID FTMS 0 0 0 7329 1461809.875 0.5188139318593717 1 -0.0917587280273437 2 Unmodified _PEQNDRTPL_ ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;ENST00000544562.5_1_14:23067206-23078652:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4 10.823927491677226 0.5436922275383211 3 [EP]QDTR[NP]{I|L} 9 3 + 38.338 0.0 0.0 3.5879 3.5879 80.612 0.0 0.0 0.0 22.853350071374628 8.952424927286849 8.952424927286849 9.208187539523756 0 0.0 0.0 0.5 0.3494850021680094 [EP]QDTR[NP]{I|L};[EP][AG]DTR[NP]{I|L};{[SA]|[TG]}[{I|L}A][VG]TDQ[HA];{[SA]|[TG]}[{I|L}A]WWQ[HA] 3.5879;2.7262;1.3593;0.13258 -;-;-;- 77 + 1 1.993 30809.0 1.0 2218 5111 7329 HBL1_DMSO_200M_050219_1,7331 HBL1_DMSO_200M_050219_1,7331,PEQNDRTPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7332 38.636 50.0 1549700.0 25 0 294390.0 + 27508 PKLPPRGVG 9 62 307.52731452707565 919.560114181427 3 307.5271484255791 MULTI CID FTMS 0 0 0 7329 1029427.3125 0.0729003921602786 -8 0.5785179138183594 3 Unmodified _PKLPPRGVG_ ENSG00000169184|ENST00000302326|MN1 10.823927491677226 0.5436922275383211 3 {I|L}[KP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PG 8 5 20.908 0.0 0.0 2.2737 0.0 0.0 0.0 68.0512941949828 68.0512941949828 16.303878175653637 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 {I|L}[KP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PG 2.2737 - 27 + 1 1.993 66807.4 1.0 2219 5111 7329 HBL1_DMSO_200M_050219_1,7332 HBL1_DMSO_200M_050219_1,7332,PKLPPRGVG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7333 38.638 99.0 762550.0 25 0 22273.0 -1 0 89 628.8887612827801 3139.4074240809005 5 629.0896484255791 MULTI CID FTMS 0 0 0 7329 1034047.3125 0.568331993751657 2 -0.2269630432128906 4 3 PWMPSTR[HM][SG]HH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 15 -1 44.292 0.0 0.0 1.4108 0.0 0.0 1322.5958628672872 0.0 1322.5958628672872 0.0 29.51599042566329 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 PWMPSTR[HM][SG]HH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 1.4108 - 1285 + 1 1.993 61136.2 1.0 2220 5111 7329 HBL1_DMSO_200M_050219_1,7333 HBL1_DMSO_200M_050219_1,7333, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7334 38.64 74.0 1132700.0 25 0 166860.0 -1 0 71 785.8593192915429 3139.408171299772 4 786.1110107302666 MULTI CID FTMS 0 0 0 7329 888353.3125 0.5551376364072946 1 -0.0917587280273437 5 3 NV[WR]P 5 -1 15.273 0.0 0.0 0.4865 0.0 0.0 864.3486644174817 1619.7178438776002 2484.066508295082 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 NV[WR]P 0.4865 - 76 + 1 1.993 66834.8 1.0 2221 5111 7329 HBL1_DMSO_200M_050219_1,7334 HBL1_DMSO_200M_050219_1,7334, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7335 38.642 63.0 888870.0 25 0 127030.0 + 4311 DARNPPVV 8 82 434.23826326807216 0 434.2375976443291 PEAK CID FTMS 0 0 0 7329 731462.9375 0.6367367286656817 1 -0.0917587280273437 6 Unmodified _DARNPPVV_ ENSG00000120915|ENST00000521400|EPHX2;nc|ENSG00000120915|P34913-2|EPHX2;nc|ENSG00000120915|P34913-3|EPHX2 19.256988751693697 0.4320151646958274 3 VPPD 4 6 23.532 0.0 0.0 2.7159 0.0 0.0 117.08362995235684 338.15964685611567 455.2432768084725 0.0 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 VPPD 2.7159 - 67 + 1 1.993 48013.0 1.0 2222 5111 7329 HBL1_DMSO_200M_050219_1,7335 HBL1_DMSO_200M_050219_1,7335,DARNPPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7336 38.643 64.0 801120.0 25 0 87501.0 + 3686 DAFGHKSNI 9 87 494.7460153458141 0 494.7458679080009 PEAK CID FTMS 0 0 0 7329 690357.0 0.237464815765839 -1 0.0983352661132812 7 Unmodified _DAFGHKSNI_ ENSG00000134058|ENST00000256443|CDK7;ENST00000512687.5_1_5:68530748-68551520:+|nuORF 47.7319792270244 0.0378718497375857 3 {M(Oxidation (M))|F}GHR 4 6 28.47 0.0 0.0 2.8831 0.0 0.0 186.06341247959185 301.14743982486567 487.2108523044575 0.0 0.0 0.0 0.0 0 1.0941876774005248 0.0 0.0 0.3807196863200844 {M(Oxidation (M))|F}GHR 2.8831 - 90 + 1 1.993 44554.9 1.0 2223 5111 7329 HBL1_DMSO_200M_050219_1,7336 HBL1_DMSO_200M_050219_1,7336,DAFGHKSNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7337 38.645 82.0 713090.0 25 0 92123.0 -1 QSLGMCPQ 8 88 460.7011522092207 919.3877514852414 2 460.7017089724541 MULTI CID FTMS 0 0 0 7329 559068.3125 0.6779979704991711 -1 0.0983352661132812 8 Carbamidomethyl (C) _QSLGMC(Carbamidomethyl (C))PQ_ ENSG00000198691|ENST00000370225|ABCA4 26.88365393820708 0.4786498634179528 3 {[QS]|[NT]}{I|L}RPC(Carbamidomethyl (C))C(Carbamidomethyl (C)) 7 -1 + 30.704 0.0 0.0 3.3397 3.3397 76.321 0.0 0.0 0.0 6.183947707303616 25.642813412979493 6.183947707303616 6.148028923534525 0 1.0 0.0 0.5994850021680094 0.3494850021680094 {[QS]|[NT]}{I|L}RPC(Carbamidomethyl (C))C(Carbamidomethyl (C));{[QS]|[NT]}{I|L}GVPC(Carbamidomethyl (C))C(Carbamidomethyl (C));[AG]S{I|L}RPC(Carbamidomethyl (C))C(Carbamidomethyl (C));[AG]S{I|L}GVPC(Carbamidomethyl (C))C(Carbamidomethyl (C));[{I|L}P]K{[QD]|[EN]|[WG]|[KD]|[RS]}C(Carbamidomethyl (C))C(Carbamidomethyl (C)) 3.3397;2.671;2.0346;1.3733;0.51994 -;-;-;-;- 82 1 1.993 52684.7 1.0 2224 5111 7329 HBL1_DMSO_200M_050219_1,7337 HBL1_DMSO_200M_050219_1,7337,QSLGMCPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7338 38.647 91.0 840360.0 25 0 112720.0 + 44545 YPESNSRAI 9 83 518.7563404603618 1035.4981279875235 2 518.7567626833916 MULTI CID FTMS 0 0 0 7329 491499.71875 0.5562080606929152 4 -0.4997520446777344 9 Unmodified _YPESNSRAI_ ENSG00000166037|ENST00000325542|CEP57;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 24.99096001346401 0.2132109383330889 3 YPEE 4 6 51.274 0.0 0.0 4.9517 0.0 0.0 0.0 514.2863262246764 514.2863262246764 29.478662999311425 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 0.3807196863200844 0.0 YPEE 4.9517 - 68 + 1 1.993 67626.6 1.0 2225 5111 7329 HBL1_DMSO_200M_050219_1,7338 HBL1_DMSO_200M_050219_1,7338,YPESNSRAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7339 38.649 120.0 731860.0 25 0 69265.0 + 3685 DAFGHKSNI 9 110 330.16627825709696 987.4770053714908 3 330.1663390994072 MULTI CID FTMS 0 0 0 7329 367914.84375 0.4459108697524508 -2 0.1916236877441406 10 Unmodified _DAFGHKSNI_ ENSG00000134058|ENST00000256443|CDK7;ENST00000512687.5_1_5:68530748-68551520:+|nuORF 12.872603262515298 0.4882369880199512 3 {[DA]|[EG]}{I|L} 3 6 30.335 0.0 0.0 3.0719 0.0 0.0 0.0 685.3043388270424 685.3043388270424 18.74073603580923 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 {[DA]|[EG]}{I|L} 3.0719 - 48 + 1 1.993 74643.8 1.0 2226 5111 7329 HBL1_DMSO_200M_050219_1,7339 HBL1_DMSO_200M_050219_1,7339,DAFGHKSNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7340 38.654 239.0 588790.0 25 0 49600.0 + 44864 YPPHVQKV 8 158 323.1837477176532 966.5294137531596 3 323.1831542849541 MULTI CID FTMS 0 0 0 7329 279307.71875 0.39101149028238 72 -4.416751861572266 11 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 30.22481116460888 0.4082965392918993 3 YPPH{[QV]|[N{I|L}]|[RA]|[KV]}KV 8 0 + 52.815 0.0 0.0 5.4644 5.4644 88.683 0.0 0.0 0.0 40.341087759491856 10.419562702124452 10.419562702124452 18.588378514285857 0 0.0 1.0457574905606752 0.0 0.3252574989159953 + + YPPH{[QV]|[N{I|L}]|[RA]|[KV]}KV;YPPHKKTP;Y[{I|L}T]K{[WT]|[RM]}GV 5.4644;3.5412;0.014762 +;-;- + 199 + 1 1.993 113430.1 1.0 2227 5111 7329 HBL1_DMSO_200M_050219_1,7340 HBL1_DMSO_200M_050219_1,7340,YPPHVQKV False True YPPHVQKV 38.653873 323.183154284954 37908733.0 7329.0 nc|ENSG00000112701|Q9GZR1-2|SENP6;;ENSG00000112701|ENST00000447266|SENP6 6.420721848805745 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7341 38.668 800.0 282550.0 25 0 7560.6 -1 0 136 842.8900105973986 3367.530936523194 4 843.1408569216728 MULTI CID FTMS 0 0 0 7329 211349.375 0.4738410348026031 -1 0.0983352661132812 12 3 NV[WR]W{[SA]|[TG]}GHSSESQK 15 -1 44.93 0.0 0.0 1.3342 0.0 0.0 1092.468913106273 532.2164879494586 1624.6854010557315 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.5891368308784531 NV[WR]W{[SA]|[TG]}GHSSESQK 1.3342 - 3244 + 1 1.993 154372.5 0.800000011920929 2228 5111 7329 HBL1_DMSO_200M_050219_1,7341 HBL1_DMSO_200M_050219_1,7341, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7342 38.674 357.0 191410.0 25 0 16099.0 -1 LEYAFCLMML 10 49 625.2891270309237 0 625.2894164919853 PEAK CID FTMS 0 0 0 7329 182860.90625 1.0 0 0.0 13 Oxidation (M) _LEYAFCLM(Oxidation (M))ML_ ENST00000424349.1_1_3:14987584-14988660:-|nuORF 4.3292370932331545 0.3961065659209837 3 DC 2 -1 9.464 0.0 0.0 0.75799 0.0 0.0 405.1981893289674 622.3096407525999 1027.5078300815674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DC 0.75799 - 8 + 1 1.993 59925.1 1.0 2229 5111 7329 HBL1_DMSO_200M_050219_1,7342 HBL1_DMSO_200M_050219_1,7342,LEYAFCLMML False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7343 38.688 800.0 162380.0 25 0 12375.0 + 23661 LTRQLELFA 9 125 545.8175715518128 1089.6205901704254 2 545.8173705935478 MULTI CID FTMS 0 0 0 7329 151657.71875 0.2969929040618786 3 -0.3497581481933594 14 Unmodified _LTRQLELFA_ REV__ENSG00000261787|ENST00000563496|TCF24 14.838274106304384 0.4350285940865338 3 {M(Oxidation (M))|F}T 2 -1 15.643 0.0 0.0 1.4357 0.0 0.0 202.16357220343167 636.3490694635374 838.5126416669691 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}T 1.4357 - 245 + 1 1.993 104506.6 0.8600000143051147 2230 5111 7329 HBL1_DMSO_200M_050219_1,7343 HBL1_DMSO_200M_050219_1,7343,LTRQLELFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7344 38.702 800.0 165660.0 25 0 12542.0 + 43124 VYPERSTSY 9 167 551.2639447778929 1100.5133366225857 2 551.2656127810478 MULTI CID FTMS 0 0 0 7329 163406.421875 0.0366961104044655 13 -1.096027374267578 15 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 27.628801355627647 0.1796483985696185 3 [YV]HMPNP{M(Oxidation (M))|F}P 9 7 + 31.964 0.0 0.0 2.9044 2.9044 79.671 0.0 0.0 0.0 8.982238096358927 20.7047302849899 8.982238096358927 9.892777875079672 0 0.2504836249442999 2.0 0.0 0.3807196863200844 [YV]HMPNP{M(Oxidation (M))|F}P;[EP]R{[ET]|[MV]}EP{M(Oxidation (M))|F}P;[YV]HMPGGP{M(Oxidation (M))|F}P;{[TV]|[{I|L}S]}[WE]PEP{M(Oxidation (M))|F}P;[EP][PS][QP]VNAY;[HD]NV[HV]H{M(Oxidation (M))|F}P;[TP][DP][QP]VNAY;[EP]R{[MG]|[TS]}S[YV]Y;{[DS]|[MA]|[CV]|TT}[YG]{[NV]|[RG]}VNAY;[HD]NRR[PG]SY 2.9044;2.0055;1.7218;1.3608;1.3405;0.984;0.85195;0.28977;0.28877;0.17275 -;-;-;-;-;-;-;-;-;- 718 1 1.993 103966.6 0.8600000143051147 2231 5111 7329 HBL1_DMSO_200M_050219_1,7344 HBL1_DMSO_200M_050219_1,7344,VYPERSTSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7345 38.716 800.0 241390.0 25 0 103280.0 + -1 NPMQTSSSV 9 105 950.7530547026624 2849.237334708187 3 951.4231445193292 MULTI CID FTMS 0 0 0 7329 134632.984375 0.6646739202543508 -1 0.0983352661132812 16 ENSG00000144802|ENST00000326172|NFKBIZ;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ 3 [NP]M{[ET]|[MV]}SSSVS 10 -1 41.793 0.0 0.0 1.4668 0.0 0.0 0.0 1826.7512866947684 1826.7512866947684 11.10899555144 0.0 0.0 0.0 0 0.0 0.0 2.018930178484529 0.3494850021680094 [NP]M{[ET]|[MV]}SSSVS 1.4668 - 3409 1 1.993 131052.2 0.6000000238418579 2232 5111 7329 HBL1_DMSO_200M_050219_1,7345 HBL1_DMSO_200M_050219_1,7345, False False NPMQTSSSV 38.715677 951.423144519329 1581891.75 7329.0 ENSG00000144802|ENST00000326172|NFKBIZ;;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ 5.527403990427653 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7346 38.721 203.0 412950.0 25 0 53796.0 -1 DLGKHYKC 8 79 510.7511024195065 1019.487651905813 2 510.7515746951103 MULTI CID FTMS 0 0 0 7329 116322.8046875 0.2647404592704934 -1 0.0983352661132812 17 Carbamidomethyl (C) _DLGKHYKC(Carbamidomethyl (C))_ ENST00000532317.5_1_11:85669287-85669476:-|nuORF 12.531546534597751 0.7257836412119636 3 DG{I|L}K{I|L} 5 -1 26.655 0.0 0.0 2.6146 0.0 0.0 0.0 490.1550997369751 490.1550997369751 14.436726795685342 0.0 0.0 0.0 0 0.6822333069283655 0.0 0.0 0.0 DG{I|L}K{I|L} 2.6146 - 53 + 1 1.993 72996.0 1.0 2233 5111 7329 HBL1_DMSO_200M_050219_1,7346 HBL1_DMSO_200M_050219_1,7346,DLGKHYKC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7348 38.725 7.2 10226000.0 25 0 1773900.0 + 24261 MAPPPPRSV 9 57 476.2574249361268 950.5002969390536 2 476.2577392458916 MULTI CID FTMS 0 0 0 7347 8070136.5 0.7618988028572515 -1 0.0917587280273437 1 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 3 {[DS]|[MA]|[CV]|TT}PPP 5 4 48.015 0.0 0.0 5.0516 0.0 0.0 0.0 454.2419222467407 454.2419222467407 44.5205343810445 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + {[DS]|[MA]|[CV]|TT}PPP 5.0516 + + 34 + 1 1.993 62177.2 1.0 2234 5112 7347 HBL1_DMSO_200M_050219_1,7348 HBL1_DMSO_200M_050219_1,7348,MAPPPPRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7349 38.727 29.0 1514400.0 25 0 137750.0 + 38132 TPMGPGRTV 9 63 458.2390040031423 914.4634550730846 2 458.2393981814384 MULTI CID FTMS 0 0 0 7347 1413028.875 0.1367611058782264 4 -0.4657707214355469 2 Unmodified _TPMGPGRTV_ ENSG00000116977|ENST00000366584|LGALS8;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;nc|ENSG00000116977|O00214-2|LGALS8 28.49450938151212 0.1686335738423394 3 TPMGP 5 4 68.003 0.0 0.0 7.4364 0.0 0.0 0.0 428.22577844791255 428.22577844791255 57.76084705832169 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.0 0.0 + TPMGP 7.4364 + + 75 + 1 1.993 39756.0 1.0 2235 5112 7347 HBL1_DMSO_200M_050219_1,7349 HBL1_DMSO_200M_050219_1,7349,TPMGPGRTV False True TPMGPGRTV 38.726556 458.239398181438 188194380.0 7347.0 ENSG00000116977|ENST00000366584|LGALS8;;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;;nc|ENSG00000116977|O00214-2|LGALS8 4.488459507624309 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7350 38.728 20.0 2568300.0 25 0 303230.0 + 24939 MPPPPPQGV 9 76 468.2362839438316 934.4580149544632 2 468.2364379763603 MULTI CID FTMS 0 0 0 7347 3205475.75 1.0 0 0.0 3 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 40.44857923139169 0.0729940656229577 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 5 4 27.943 0.0 0.0 2.9903 0.0 0.0 0.0 396.18843836130526 396.18843836130526 13.963336940792964 0.0 0.0 0.0 0 0.6109243748081782 0.0 0.7396518287104438 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 2.9903 + + 113 1 1.993 46355.7 1.0 2236 5112 7347 HBL1_DMSO_200M_050219_1,7350 HBL1_DMSO_200M_050219_1,7350,MPPPPPQGV True False MPPPPPQGV 38.727735 468.23643797636 422241080.0 7347.0 ENSG00000164754|ENST00000297338|RAD21;;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 8.552744547526041 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7351 38.729 21.0 1695800.0 25 0 202730.0 + 4313 DARPSVNAV 9 64 464.745862217338 927.477171501476 2 464.7460510134697 MULTI CID FTMS 0 0 0 7347 2809573.5 1.0 0 0.0 4 Unmodified _DARPSVNAV_ ENSG00000087053|ENST00000346299|MTMR2;ENSG00000171100|ENST00000370396|MTM1;nc|ENSG00000087053|Q13614-2|MTMR2;nc|ENSG00000171100|Q13496-2|MTM1 26.268140514670165 0.1969607489560049 3 VNAV 4 5 38.175 0.0 0.0 4.116 0.0 0.0 526.2516581625764 0.0 526.2516581625764 0.0 27.2062251842808 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + VNAV 4.116 + + 44 1 1.993 35981.1 1.0 2237 5112 7347 HBL1_DMSO_200M_050219_1,7351 HBL1_DMSO_200M_050219_1,7351,DARPSVNAV False True DARPSVNAV 38.728914 464.74605101347 38751144.0 7347.0 nc|ENSG00000087053|Q13614-2|MTMR2;;ENSG00000087053|ENST00000346299|MTMR2;;nc|ENSG00000171100|Q13496-2|MTM1;;ENSG00000171100|ENST00000370396|MTM1 7.384538491566976 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7352 38.731 120.0 929630.0 25 0 117360.0 -1 DLGKHYKC 8 118 340.83691810489256 1019.4889249148778 3 340.8368408083916 MULTI CID FTMS 0 0 0 7347 512573.0 1.0 0 0.0 5 Carbamidomethyl (C) _DLGKHYKC(Carbamidomethyl (C))_ ENST00000532317.5_1_11:85669287-85669476:-|nuORF 6.2057823575117 0.7866635192979977 3 DG{I|L}K{I|L} 5 -1 29.029 0.0 0.0 2.8474 0.0 0.0 0.0 490.1551607721313 490.1551607721313 13.73376226923302 0.0 0.0 0.0 0 0.1237125054200235 1.0969100130080565 0.0 0.0 DG{I|L}K{I|L} 2.8474 - 132 + 1 1.993 93226.7 1.0 2238 5112 7347 HBL1_DMSO_200M_050219_1,7352 HBL1_DMSO_200M_050219_1,7352,DLGKHYKC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7353 38.733 95.0 484100.0 25 0 65957.0 25086 MPVVWPTL 8 69 471.7575454630159 0 471.7573119997978 PEAK CID FTMS 0 0 0 7347 443483.65625 0.8662834417600999 -16 1.1672439575195312 6 Unmodified _MPVVWPTL_ ENSG00000158636|ENST00000695367|EMSY;ENST00000427574.6_1_11:76157982-76207767:+|nuORF;ENST00000525959.5_1_11:76157982-76169223:+|nuORF;ENST00000528826.1_1_11:76157982-76169407:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-3|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 19.438996006549623 0.4285751805470146 3 P 1 7 10.797 0.0 0.0 1.1468 0.0 0.0 131.0419928903651 710.3840240158814 841.4260169062466 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + P 1.1468 + + 34 + 1 1.993 41986.1 1.0 2239 5112 7347 HBL1_DMSO_200M_050219_1,7353 HBL1_DMSO_200M_050219_1,7353,MPVVWPTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7354 38.737 179.0 459780.0 25 0 56368.0 -1 0 97 383.2402237524315 764.4658945716631 2 383.2399169802666 MULTI CID FTMS 0 0 0 7347 381804.3125 1.0 0 0.0 7 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}HR 6 -1 + 65.763 0.0 0.0 8.6024 8.6024 91.631 0.0 0.0 0.0 26.478174818886373 6.989700043360188 6.989700043360188 6.989700043360188 0 0.6549471895720985 2.0 0.0 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}HR;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}RH;{[QV]|[N{I|L}]|[RA]|[KV]}VV[{I|L}A]H 8.6024;7.6881;2.4923 -;-;- 52 + 1 1.993 68254.8 1.0 2240 5112 7347 HBL1_DMSO_200M_050219_1,7354 HBL1_DMSO_200M_050219_1,7354, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7355 38.739 96.0 472360.0 25 0 75338.0 + 16326 IYHNGQDL 8 85 480.2320459409535 958.4495389487072 2 480.2319213747978 MULTI CID FTMS 0 0 0 7347 381193.53125 1.0 0 0.0 8 Unmodified _IYHNGQDL_ ENSG00000146094|ENST00000510898|DOK3;nc|ENSG00000146094|Q7L591|DOK3 23.1484247019978 0.5573009939494978 3 D{I|L} 2 6 29.196 0.0 0.0 3.0462 0.0 0.0 712.326917344018 0.0 712.326917344018 0.0 19.10728139283883 0.0 0.0 0 1.0 0.0 0.2742275032520141 0.0 + D{I|L} 3.0462 + + 122 + 1 1.993 40146.2 1.0 2241 5112 7347 HBL1_DMSO_200M_050219_1,7355 HBL1_DMSO_200M_050219_1,7355,IYHNGQDL False True IYHNGQDL 38.738989 480.231921374798 1786346.375 7347.0 ENSG00000146094|ENST00000510898|DOK3;;nc|ENSG00000146094|Q7L591|DOK3 1.3188138405481975 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7356 38.741 110.0 688480.0 25 0 115010.0 + 14753 ILDESHERV 9 102 366.5246056949305 1096.5519876849914 3 366.5243408083916 MULTI CID FTMS 0 0 0 7347 380534.625 1.0 0 0.0 9 Unmodified _ILDESHERV_ ENSG00000128534|ENST00000249299|LSM8 22.65808497894818 0.2428932432760099 3 {I|L}{I|L}DESHE[RV] 9 0 + 69.764 0.0 0.0 6.3622 6.3622 92.01 0.0 0.0 0.0 59.05098945761678 4.137342758552691 4.137342758552691 22.134679910804408 0 0.2134679910804404 1.6989700043360187 0.3807196863200844 0.0 + + {I|L}{I|L}DESHE[RV];{I|L}VEESHE[RV] 6.3622;4.3436 +;- + 109 + 1 1.993 68120.4 1.0 2242 5112 7347 HBL1_DMSO_200M_050219_1,7356 HBL1_DMSO_200M_050219_1,7356,ILDESHERV False True ILDESHERV 38.741304 366.524340808392 2676078.25 7347.0 ENSG00000128534|ENST00000249299|LSM8 5.676547527313232 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7357 38.744 139.0 697260.0 25 0 84336.0 6504 EAKGGGVV 8 100 358.70061807802006 715.3866832228401 2 358.7005493044853 MULTI CID FTMS 0 0 0 7347 230581.46875 0.0843023343496005 -1 0.0917587280273437 10 Unmodified _EAKGGGVV_ ENSG00000187867|ENST00000669674|PALM3;nc|ENSG00000187867|A6NDB9|PALM3 14.581692164780916 0.6954967302934248 3 {[CP]|[EA]}{I|L}ERV 6 5 + 41.159 0.0 0.0 5.7533 5.7533 76.247 0.0 0.0 0.0 6.478174818886373 0.7918124604762511 0.7918124604762511 0.7918124604762511 0 0.25 0.0 0.7742275032520141 0.25 {[CP]|[EA]}{I|L}ERV;{[CP]|[EA]}{I|L}EVR;{[CP]|[EA]}{I|L}VER;{[CP]|[EA]}V{I|L}ER;{[CP]|[EA]}{I|L}VWV;{[CP]|[EA]}V{I|L}WV;{[QN]|[E{I|L}]|[KN]}RV{[CP]|[EA]};{[CP]|[EA]}{I|L}[RD]{I|L};{[RE]|[WV]}V{I|L}{[CP]|[EA]};{[CP]|[EA]}V{[RE]|[WV]}{I|L} 5.7533;5.6427;5.4046;4.5709;3.9008;3.2339;2.639;2.3932;1.7726;1.5595 -;-;-;-;-;-;-;-;-;- 117 + 1 1.993 82010.2 1.0 2243 5112 7347 HBL1_DMSO_200M_050219_1,7357 HBL1_DMSO_200M_050219_1,7357,EAKGGGVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7358 38.751 361.0 305420.0 25 0 34827.0 -1 0 71 644.7778122788219 2575.0821432488874 4 645.0289184451103 MULTI CID FTMS 0 0 0 7347 201322.046875 0.9180689402592332 -2 0.190093994140625 11 3 DR 2 -1 19.508 0.0 0.0 0.75758 0.0 0.0 1731.71670757094 569.2276095025999 2300.94431707354 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.3807196863200844 DR 0.75758 - 49 + 1 1.993 85266.7 1.0 2244 5112 7347 HBL1_DMSO_200M_050219_1,7358 HBL1_DMSO_200M_050219_1,7358, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7359 38.764 800.0 529920.0 25 0 25363.0 -1 0 108 884.8140219188913 4419.033727261456 5 885.2142211794853 MULTI CID FTMS 0 0 0 7347 198002.796875 0.3289218575557983 -1 0.0917587280273437 12 3 ASAAY 5 -1 43.22 0.0 0.0 0.97805 0.0 0.0 3614.70380791216 338.0988863580688 3952.802694270227 0.0 0.0 0.0 0.0 0 2.0 0.0 0.6643943297944485 0.0 ASAAY 0.97805 - 539 + 1 1.993 287189.9 0.7400000095367432 2245 5112 7347 HBL1_DMSO_200M_050219_1,7359 HBL1_DMSO_200M_050219_1,7359, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7360 38.771 334.0 270890.0 25 0 50812.0 + 24731 MPDSDSASSDV 11 125 555.7158574289972 1109.4171619247943 2 555.7161132693291 MULTI CID FTMS 0 0 0 7347 172998.6875 0.6664570328785155 8 -0.8909111022949219 13 Unmodified _MPDSDSASSDV_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 9.38312468134398 0.8308777417566128 3 MP 2 -1 39.38 0.0 0.0 3.5496 0.0 0.0 0.0 878.3024142550953 878.3024142550953 25.83613437787733 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 MP 3.5496 + + 428 + 1 1.993 78461.1 1.0 2246 5112 7347 HBL1_DMSO_200M_050219_1,7360 HBL1_DMSO_200M_050219_1,7360,MPDSDSASSDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7361 38.78 535.0 202620.0 25 0 26952.0 + 240 AAVSRVVEA 9 158 451.2584545605952 900.5023561879905 2 451.2588683962822 MULTI CID FTMS 0 0 0 7347 173294.140625 1.0 0 0.0 14 Unmodified _AAVSRVVEA_ ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40 16.149105407346934 0.3995459350917656 3 AAVVQ[{I|L}T]EA 9 4 + 30.011 0.0 0.0 3.3327 3.3327 69.168 0.0 0.0 0.0 18.188876751639576 2.8714454640340463 2.8714454640340463 0.9691001300805624 0 0.6989700043360187 1.3979400086720375 0.5 0.0 AAVVQ[{I|L}T]EA;AAVVK[DV]EA;AAVVK[WM]P;AAVV[AG][{I|L}T]EA;AAVVQ[{I|L}V]DS;{I|L}{I|L}NQ[{I|L}T]EA;{I|L}{I|L}NK[DV]EA;AAVV[AG][{I|L}V]DS;[RK][PS][{I|L}T]EA;{I|L}{I|L}NK[WM]P 3.3327;3.2251;2.5681;2.3102;1.7883;1.2027;1.0951;0.76576;0.45625;0.44566 -;-;-;-;-;-;-;-;-;- 240 + 1 1.993 87657.0 1.0 2247 5112 7347 HBL1_DMSO_200M_050219_1,7361 HBL1_DMSO_200M_050219_1,7361,AAVSRVVEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7362 38.794 800.0 229230.0 25 0 12283.0 + 10654 FVQLCPYKGQG 11 141 620.3132969374445 1238.612040941689 2 620.3126098513603 MULTI CID FTMS 0 0 0 7347 158961.234375 0.1728162712768223 -21 1.3464889526367188 15 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 3 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 83.192 20.222 5.1041 6.7165 6.7165 61.326 0.0 0.0 0.0 0.0 56.82971988162228 0.0 0.0 0 3.274227503252014 0.0 0.0 1.9406140654642807 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 6.7165 - 4730 + 1 1.993 136189.0 0.8299999833106995 2248 5112 7347 HBL1_DMSO_200M_050219_1,7362 HBL1_DMSO_200M_050219_1,7362,FVQLCPYKGQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7363 38.8 262.0 269550.0 25 0 34369.0 + 3605 DAASPRMV 8 111 423.7101619068424 0 423.7100097537041 PEAK CID FTMS 0 0 0 7347 143833.046875 0.6746396005097623 -1 0.0917587280273437 16 Unmodified _DAASPRMV_ ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF 19.256988751693697 0.4320151646958274 3 ASP 3 5 21.555 0.0 0.0 2.5496 0.0 0.0 186.06293938993664 401.1991060846313 587.2620454745679 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + ASP 2.5496 + + 39 + 1 1.993 58277.7 1.0 2249 5112 7347 HBL1_DMSO_200M_050219_1,7363 HBL1_DMSO_200M_050219_1,7363,DAASPRMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7364 38.814 800.0 255450.0 25 0 6258.2 + -1 GAAPAPTAV 9 116 753.8443867622675 3011.34844118267 4 754.0959350466728 MULTI CID FTMS 0 0 0 7347 116948.4375 0.1942862144550999 -3 0.2833824157714844 17 chr11:111357710-111358788|10|83.9|0.04|10.99|-|0|POU2AF1,POU2AF1|1;ENSG00000110777|ENST00000393067|POU2AF1 3 NVGT[PS]GTWG 10 -1 60.967 0.0 0.0 2.0246 0.0 0.0 736.2917327210142 1315.569189564773 2051.860922285787 0.0 0.0 0.0 0.0 0 0.6861818737241735 0.0 2.1989700043360187 0.0 NVGT[PS]GTWG 2.0246 - 2525 + 1 1.993 144618.8 0.5400000214576721 2250 5112 7347 HBL1_DMSO_200M_050219_1,7364 HBL1_DMSO_200M_050219_1,7364, False False GAAPAPTAV 38.813606 754.095935046673 1112757.5 7347.0 chr11:111357710-111358788|10|83.9|0.04|10.99|-|0|POU2AF1,POU2AF1|1;;ENSG00000110777|ENST00000393067|POU2AF1 2.990443030993144 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7365 38.827 800.0 222720.0 25 0 13052.0 -1 0 115 603.2771949145964 3011.3495922399816 5 603.4789916872978 MULTI CID FTMS 0 0 0 7347 103086.0703125 0.1393311543003695 -2 0.190093994140625 18 3 GETGT{[RE]|[WV]}GV[HM]GSH{[YC]|[HE]} 16 -1 71.826 0.0 0.0 2.3852 0.0 0.0 1291.58936298514 0.0 1291.58936298514 0.0 54.42979712652914 0.0 0.0 0 0.4247425010840047 0.0 1.579689690656103 0.0 GETGT{[RE]|[WV]}GV[HM]GSH{[YC]|[HE]} 2.3852 - 3062 + 1 1.993 134555.4 0.5899999737739563 2251 5112 7347 HBL1_DMSO_200M_050219_1,7365 HBL1_DMSO_200M_050219_1,7365, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7366 38.842 800.0 79066.0 25 0 4045.9 -1 0 75 577.4688627580744 2882.3079314573715 5 577.6700927615166 MULTI CID FTMS 0 0 0 7347 35469.40234375 0.8140864307198292 -1 0.0917587280273437 19 3 {[QN]|[E{I|L}]|[KN]}[KT]S 5 -1 8.1606 0.0 0.0 0.28313 0.0 0.0 0.0 2320.9826302887163 2320.9826302887163 1.170912423450405 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[KT]S 0.28313 - 66 1 1.993 54869.4 0.5600000023841858 2252 5112 7347 HBL1_DMSO_200M_050219_1,7366 HBL1_DMSO_200M_050219_1,7366, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7367 38.856 800.0 49281.0 25 0 3489.4 -1 NQFFVPEEMN 10 81 635.7759483158609 1269.5373436985217 2 635.7733032107353 MULTI CID FTMS 0 0 0 7347 90206.1640625 0.1258666914975935 5 -0.5453262329101562 20 Oxidation (M) _NQFFVPEEM(Oxidation (M))N_ ENSG00000071991|ENST00000262150|CDH19;nc|ENSG00000071991|Q9H159-2|CDH19 6.723162845929126 0.6955379296933136 3 {M(Oxidation (M))|F} 1 -1 10.485 0.0 0.0 0.82586 0.0 0.0 1104.4915348379732 0.0 1104.4915348379732 0.0 -9.665762445130497 -9.665762445130497 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.82586 + + 145 + 1 1.993 33378.3 0.6700000166893005 2253 5112 7347 HBL1_DMSO_200M_050219_1,7367 HBL1_DMSO_200M_050219_1,7367,NQFFVPEEMN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7369 38.861 40.0 1099700.0 25 0 185600.0 + 4902 DGKQQVQVV 9 84 500.775352885321 999.5361528374422 2 500.7751037478447 MULTI CID FTMS 0 0 0 7368 1466748.5 0.5218861502464351 1 -0.1227951049804687 1 Unmodified _DGKQQVQVV_ ENSG00000068796|ENST00000407818|KIF2A;ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000068796|O00139-1|KIF2A;nc|ENSG00000068796|O00139-2|KIF2A;nc|ENSG00000068796|O00139-5|KIF2A;nc|ENSG00000068796|O00139|KIF2A;nc|ENSG00000142945|Q99661-2|KIF2C 52.268347100219714 0.0353964759249114 3 {[QV]|[N{I|L}]|[RA]|[KV]}[NS]QVQVV 9 4 + 56.422 0.0 0.0 5.6448 5.6448 85.586 0.0 0.0 0.0 14.911648459259638 41.81778911390245 14.911648459259638 9.018637558036673 0 0.7742275032520141 0.0 1.0941876774005248 1.4604093769761874 {[QV]|[N{I|L}]|[RA]|[KV]}[NS]QVQVV;{[QV]|[N{I|L}]|[RA]|[KV]}VDDVQVV;{[QV]|[N{I|L}]|[RA]|[KV]}[NS][AG]VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}[NS]QV[AG]VV;{[QV]|[N{I|L}]|[RA]|[KV]}Q[NS]VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}[NS]VQQVV;{[QV]|[N{I|L}]|[RA]|[KV]}VDDV[AG]VV;{[QV]|[N{I|L}]|[RA]|[KV]}[AG][NS]VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}Q[NS]V[AG]VV;{[QV]|[N{I|L}]|[RA]|[KV]}V[NS]QQVV 5.6448;4.7425;4.7236;4.7236;4.5779;4.27;3.8213;3.6567;3.6567;3.3677 -;-;-;-;-;-;-;-;-;- 470 1 1.991 40414.2 1.0 2254 5113 7368 HBL1_DMSO_200M_050219_1,7369 HBL1_DMSO_200M_050219_1,7369,DGKQQVQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7370 38.863 91.0 560040.0 25 0 60603.0 + 41212 VPEYIELM 8 74 497.25365778828825 992.4927626433764 2 497.2536804080009 MULTI CID FTMS 0 0 0 7368 602967.375 0.2506571011351162 5 -0.5318107604980469 2 Unmodified _VPEYIELM_ REV__ENSG00000108622|ENST00000579788|ICAM2 26.34127834903884 0.4900704351052977 3 VPESS 5 -1 60.675 0.0 0.0 6.1134 0.0 0.0 0.0 490.2418306940063 490.2418306940063 49.837869877892544 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.8494850021680094 0.0 VPESS 6.1134 - 74 + 1 1.991 44426.3 1.0 2255 5113 7368 HBL1_DMSO_200M_050219_1,7370 HBL1_DMSO_200M_050219_1,7370,VPEYIELM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7371 38.864 14.0 3035500.0 25 0 290470.0 + 13229 HHPDYNNEL 9 69 569.7491078049561 1137.483662676712 2 569.7493163943291 MULTI CID FTMS 0 0 0 7368 4186256.25 0.6676652723268808 -1 0.1352043151855468 3 Unmodified _HHPDYNNEL_ ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11 25.399314129420983 0.2080152500878129 3 HH[DP]YNNE{I|L} 9 0 + 43.183 0.0 0.0 3.7963 3.7963 80.719 0.0 0.0 0.0 14.533000792149036 8.969975784476162 8.969975784476162 9.208187539523747 0 0.1822333069283654 1.0969100130080565 0.0 0.4247425010840047 + + HH[DP]YNNE{I|L};HH[DP]YNGGE{I|L};HH[DP]YGGNE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NNY[HC]D{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGNY[HC]D{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NGGY[HC]D{I|L};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))S]NHHE{I|L};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))S]NEQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))S]HHNE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}[TA]HHE{I|L} 3.7963;2.9868;2.9868;2.5187;1.7092;1.7092;1.1616;0.96271;0.57177;0.4238 +;-;-;-;-;-;-;-;-;- + 104 1 1.991 36999.1 1.0 2256 5113 7368 HBL1_DMSO_200M_050219_1,7371 HBL1_DMSO_200M_050219_1,7371,HHPDYNNEL False True HHPDYNNEL 38.863763 569.749316394329 119117177.0 7368.0 ENSG00000120509|ENST00000239666|PDZD11;;nc|ENSG00000120509|Q5EBL8-2|PDZD11 9.099378903706867 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7372 38.865 14.0 4137900.0 25 0 685600.0 + 26133 NPSMPQRTV 9 80 515.2607408698069 1028.5069288064135 2 515.2610961794853 MULTI CID FTMS 0 0 0 7368 4089867.25 0.5185487024323894 -2 0.2269630432128906 4 Unmodified _NPSMPQRTV_ ENSG00000197943|ENST00000564138|PLCG2 53.40400417844725 0.0329064971918313 3 NPSMPQ 6 3 76.191 0.0 0.0 7.4079 0.0 0.0 0.0 371.2056978815063 371.2056978815063 65.7331348114792 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.4247425010840047 0.4247425010840047 + NPSMPQ 7.4079 + + 112 + 1 1.991 52793.4 1.0 2257 5113 7368 HBL1_DMSO_200M_050219_1,7372 HBL1_DMSO_200M_050219_1,7372,NPSMPQRTV True True NPSMPQRTV 38.864942 515.261096179485 284400544.0 7368.0 ENSG00000197943|ENST00000564138|PLCG2 7.075725237528483 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7373 38.867 73.0 1129500.0 25 0 133000.0 + 35758 SVIKELRKA 9 96 348.5573418803318 1042.6501962411955 3 348.5570251345634 MULTI CID FTMS 0 0 0 7368 601451.5 0.1591891997761907 -2 0.2269630432128906 5 Unmodified _SVIKELRKA_ ENSG00000204899|ENST00000377818|MZT1 22.736283301280096 0.2418982879461534 3 [VS]{I|L}KA{I|L}{[SA]|[TG]}RV 10 5 + 55.935 0.0 0.0 5.3647 5.3647 83.591 0.0 0.0 0.0 43.37205316164642 5.221609587005389 5.221609587005389 7.3290220443144705 0 0.4247425010840047 2.0 0.3807196863200844 0.8494850021680094 [VS]{I|L}KA{I|L}{[SA]|[TG]}RV;[VS]{I|L}KA{I|L}[WK]V;[VS]{I|L}KARV[TA]V;[VS]A{I|L}K{I|L}{[SA]|[TG]}RV;[VS]A{I|L}K{I|L}[WK]V;[K{I|L}]{M(Oxidation (M))|F}RRR[PA] 5.3647;4.6618;4.1603;2.9002;2.1973;0.16407 -;-;-;-;-;- 178 + 1 1.991 73177.0 1.0 2258 5113 7368 HBL1_DMSO_200M_050219_1,7373 HBL1_DMSO_200M_050219_1,7373,SVIKELRKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7374 38.869 97.0 537700.0 25 0 78084.0 + -1 SPRLVSLMTEE 11 75 426.5529444472375 1276.6370039419123 3 426.5531799197197 MULTI CID FTMS 0 0 0 7368 587336.375 1.0 0 0.0 6 Oxidation (M) _SPRLVSLM(Oxidation (M))TEE_ REV__ENSG00000138688|ENST00000679879|BLTP1;REV__ENST00000482114.1_1_4:123130334-123145991:+|nuORF;REV__nc|ENSG00000138688|Q2LD37-2|BLTP1;REV__nc|ENSG00000138688|Q2LD37-4|BLTP1;REV__nc|ENSG00000138688|Q2LD37-5|BLTP1;REV__nc|ENSG00000138688|Q2LD37-6|BLTP1;REV__nc|ENSG00000138688|Q2LD37-7|BLTP1;REV__nc|ENSG00000138688|Q2LD37|BLTP1 8.751783647060863 0.8338564498997137 3 [RV]{I|L}PSS 6 -1 38.918 0.0 0.0 3.0485 0.0 0.0 0.0 634.2420377930421 634.2420377930421 25.7306842758112 0.0 0.0 0.0 0 1.3935078169319297 1.0969100130080565 0.8494850021680094 0.0 [RV]{I|L}PSS 3.0485 - 93 1 1.991 48208.2 1.0 2259 5113 7368 HBL1_DMSO_200M_050219_1,7374 HBL1_DMSO_200M_050219_1,7374,SPRLVSLMTEE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7375 38.87 62.0 946500.0 25 0 95667.0 + 13134 HFIEKAHTL 9 104 365.8696250484877 0 365.8695556521416 PEAK CID FTMS 0 0 0 7368 585753.9375 0.1543977460848276 -2 0.2269630432128906 7 Unmodified _HFIEKAHTL_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19762333-19763700:-|nuORF;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 45.739877483867886 0.0433205460926695 3 E{I|L}{M(Oxidation (M))|F} 3 8 8.4164 0.0 0.0 1.1534 0.0 0.0 203.4690419776387 134.03650842838127 337.50555040602 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}{M(Oxidation (M))|F} 1.1534 - 83 + 1 1.991 53179.4 1.0 2260 5113 7368 HBL1_DMSO_200M_050219_1,7375 HBL1_DMSO_200M_050219_1,7375,HFIEKAHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7376 38.872 88.0 819860.0 25 0 93312.0 + 33252 SFPASSGVSH 10 96 488.2303025289275 974.446052124655 2 488.2307006716728 MULTI CID FTMS 0 0 0 7368 461516.78125 0.3185173444590651 25 -1.2699127197265625 8 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 47.74868867922204 0.0933642699623533 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH 10 0 + 69.562 0.0 0.0 7.1387 7.1387 92.976 0.0 0.0 0.0 45.5655637381809 7.045831976780477 7.045831976780477 13.359338553900102 0 0.3807196863200844 2.0 0.6861818737241735 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[QN]|[E{I|L}]|[KN]}VKCAPDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSG[HS]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H;{[QN]|[E{I|L}]|[KN]}RSSAPDT 7.1387;5.7677;4.611;4.5395;4.1347;3.5905 +;-;-;-;-;- + 223 + 1 1.991 63951.6 1.0 2261 5113 7368 HBL1_DMSO_200M_050219_1,7376 HBL1_DMSO_200M_050219_1,7376,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7377 38.875 113.0 429440.0 25 0 43780.0 + 36583 TALNNHSSI 9 97 478.7452496053069 0 478.7434265017509 PEAK CID FTMS 0 0 0 7368 380620.25 1.0 0 0.0 9 Unmodified _TALNNHSSI_ ENSG00000124733|ENST00000244711|MEA1 27.628801355627647 0.1319135480000405 3 {I|L}NN 3 6 10.467 0.0 0.0 1.0955 0.0 0.0 172.09125497057636 439.1922091119751 611.2834640825514 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}NN 1.0955 + + 71 + 1 1.991 41449.9 1.0 2262 5113 7368 HBL1_DMSO_200M_050219_1,7377 HBL1_DMSO_200M_050219_1,7377,TALNNHSSI False True TALNNHSSI 38.87458 478.743426501751 2797104.25 7368.0 ENSG00000124733|ENST00000244711|MEA1 4.374398469924927 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7378 38.878 202.0 388320.0 25 0 20369.0 + 2458 AQVTVRPKM 9 122 343.86730576245054 1028.5800878875516 3 343.8670226931572 MULTI CID FTMS 0 0 0 7368 354846.625 1.0 0 0.0 10 Unmodified _AQVTVRPKM_ ENST00000354911.8_2_10:28822518-28879725:+|nuORF 23.78978130925829 0.2284941198415988 3 CTV[RP]KM 7 3 24.217 0.0 0.0 2.3544 0.0 0.0 195.1371080064953 0.0 195.1371080064953 0.0 12.434014729891809 0.0 0.0 0 0.0 0.0 0.0 0.6382104921644451 CTV[RP]KM 2.3544 - 231 + 1 1.991 72980.9 1.0 2263 5113 7368 HBL1_DMSO_200M_050219_1,7378 HBL1_DMSO_200M_050219_1,7378,AQVTVRPKM False True AQVTVRPKM 38.878428 343.867022693157 1684753.25 7368.0 ENST00000354911.8_2_10:28822518-28879725:+|nuORF 4.397972583770752 3.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7379 38.891 731.0 211640.0 25 0 31572.0 -1 YYGNYCEGSC 10 145 608.2079732472209 0 608.2078735232353 PEAK CID FTMS 0 0 0 7368 262962.03125 1.0 0 0.0 11 Carbamidomethyl (C) _YYGNYC(Carbamidomethyl (C))EGSC_ ENSG00000163083|ENST00000295228|INHBB 6.723162845929126 0.3961065659209837 3 D 1 -1 11.114 0.0 0.0 0.91519 0.0 0.0 918.30030210792 178.05146204166252 1096.3517641495826 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.2887254899964357 0.0 D 0.91519 - 75 + 1 1.991 112157.6 1.0 2264 5113 7368 HBL1_DMSO_200M_050219_1,7379 HBL1_DMSO_200M_050219_1,7379,YYGNYCEGSC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7380 38.904 764.0 100100.0 25 0 6967.0 -1 0 82 674.5133478642969 3367.530356988484 5 674.7134887576103 MULTI CID FTMS 0 0 0 7368 258573.84375 0.4319629699622975 1 -0.1227951049804687 12 3 GTWG 4 -1 23.972 0.0 0.0 0.71186 0.0 0.0 1647.7688256647189 1315.569111292436 2963.337936957155 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 GTWG 0.71186 - 583 + 1 1.991 62375.4 1.0 2265 5113 7368 HBL1_DMSO_200M_050219_1,7380 HBL1_DMSO_200M_050219_1,7380, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7381 38.908 207.0 542690.0 25 0 62019.0 + 21498 LPHWPLPHA 9 125 534.2943387729905 1066.574124612781 2 534.2917358279228 MULTI CID FTMS 0 0 0 7368 202537.40625 0.0760602959438339 -18 1.3678131103515625 13 Unmodified _LPHWPLPHA_ REV__ENST00000266000.10_2_6:33288751-33288820:-|nuORF 20.871210003555333 0.2717241269066626 3 {I|L}PPEPN 6 -1 69.117 0.0 0.0 6.4803 0.0 0.0 0.0 416.2379244440063 416.2379244440063 35.230012720637376 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.0 0.4247425010840047 {I|L}PPEPN 6.4803 - 442 + 1 1.991 94712.8 1.0 2266 5113 7368 HBL1_DMSO_200M_050219_1,7381 HBL1_DMSO_200M_050219_1,7381,LPHWPLPHA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7382 38.921 742.0 251870.0 25 0 34533.0 + 31374 RNTFTGPTFH 10 144 589.2908680544707 1176.567183175741 2 589.2906982302666 MULTI CID FTMS 0 0 0 7368 256906.59375 1.0 0 0.0 14 Unmodified _RNTFTGPTFH_ REV__ENST00000437336.1_1_1:154350783-154351305:-|nuORF 18.1463463914782 0.5430639438673815 3 QQ{I|L}[RD]YAV{[QG]|[NA]} 10 -1 + 39.978 0.0 0.0 3.3979 3.3979 76.006 0.0 0.0 0.0 5.623497715886352 7.269987279362624 5.623497715886352 5.623497715886352 0 0.5 0.0 0.805462187404089 0.4247425010840047 QQ{I|L}[RD]YAV{[QG]|[NA]};{[VA]|[{I|L}G]}AQ[RD]YAV{[QG]|[NA]};{[TV]|[{I|L}S]}[NG]W[{M(Oxidation (M))|F}V]AV{[QG]|[NA]};QQM[RP]YAV{[QG]|[NA]};{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V][HS]YAV{[QG]|[NA]};[Q{I|L}]Q[RD]YAV{[QG]|[NA]};{[QD]|[EN]|[WG]|[KD]|[RS]}QW[{M(Oxidation (M))|F}V]AV{[QG]|[NA]};{[VA]|[{I|L}G]}[NS]W[{M(Oxidation (M))|F}V]AV{[QG]|[NA]};QQ{I|L}{[MG]|[TS]}[{M(Oxidation (M))|F}V]AV{[QG]|[NA]};{[VA]|[{I|L}G]}A[AG][RD]YAV{[QG]|[NA]} 3.3979;2.9199;2.834;2.7133;2.6879;2.5251;2.475;2.4491;2.2703;2.144 -;-;-;-;-;-;-;-;-;- 1008 1 1.991 142769.6 1.0 2267 5113 7368 HBL1_DMSO_200M_050219_1,7382 HBL1_DMSO_200M_050219_1,7382,RNTFTGPTFH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7383 38.925 182.0 654500.0 25 0 138710.0 27488 PKGRPGPV 8 107 404.2462292999774 806.4779056667549 2 404.2469665408134 MULTI CID FTMS 0 0 0 7368 248112.078125 0.4588957941339428 -6 0.58697509765625 15 Unmodified _PKGRPGPV_ ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A 5.230669730166228 0.792582437072536 3 [KP]PS 4 5 16.972 0.0 0.0 2.1045 0.0 0.0 0.0 394.2199495904906 394.2199495904906 5.552414100986649 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [KP]PS 2.1045 - 77 + 1 1.991 100967.0 1.0 2268 5113 7368 HBL1_DMSO_200M_050219_1,7383 HBL1_DMSO_200M_050219_1,7383,PKGRPGPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7384 38.931 290.0 275990.0 25 0 37155.0 + 2065 APLSPYPTTM 10 120 539.2676908188314 0 539.2670165896416 PEAK CID FTMS 0 0 0 7368 220327.71875 0.8850047187577099 1 -0.1227951049804687 16 Unmodified _APLSPYPTTM_ REV__chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;REV__ENSG00000137265|ENST00000380956|IRF4;REV__ENST00000495137.5_1_6:394829-397293:+|nuORF;REV__nc|ENSG00000137265|Q15306-2|IRF4 25.399314129420983 0.2547831343944559 3 P{I|L}{I|L}{[DS]|[MA]|[CV]|TT}TS 7 -1 25.794 0.0 0.0 2.3961 0.0 0.0 71.0398124508675 289.10810266666255 360.14791511753003 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.6989700043360187 0.0 P{I|L}{I|L}{[DS]|[MA]|[CV]|TT}TS 2.3961 - 195 + 1 1.991 66381.9 1.0 2269 5113 7368 HBL1_DMSO_200M_050219_1,7384 HBL1_DMSO_200M_050219_1,7384,APLSPYPTTM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7385 38.945 800.0 238890.0 25 0 50506.0 + 21432 LPHDMQRNV 9 183 555.278179051675 1108.54180517015 2 555.2795898318291 MULTI CID FTMS 0 0 0 7368 213956.890625 1.0 0 0.0 17 Unmodified _LPHDMQRNV_ ENSG00000168556|ENST00000302327|ING2 24.020572477871973 0.2255576514309169 3 {I|L}PHDT 5 5 49.382 0.0 0.0 4.4547 0.0 0.0 0.0 542.2443941705686 542.2443941705686 25.37786799927195 0.0 0.0 0.0 0 0.5649093276264391 1.3010299956639813 0.0 0.0 {I|L}PHDT 4.4547 - 2122 + 1 1.991 151328.5 0.9200000166893004 2270 5113 7368 HBL1_DMSO_200M_050219_1,7385 HBL1_DMSO_200M_050219_1,7385,LPHDMQRNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7386 38.959 800.0 145860.0 25 0 4397.1 -1 0 110 697.9198458074413 3484.5628467042065 5 698.1211425662041 MULTI CID FTMS 0 0 0 7368 202073.59375 1.0 0 0.0 18 3 GTWG 4 -1 16.899 0.0 0.0 0.48497 0.0 0.0 1764.8003022489404 1315.5678327315177 3080.368134980458 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 GTWG 0.48497 - 1236 + 1 1.991 90343.7 0.8399999737739563 2271 5113 7368 HBL1_DMSO_200M_050219_1,7386 HBL1_DMSO_200M_050219_1,7386, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7387 38.964 283.0 120370.0 25 0 6109.0 + 28880 AQLQQQHSL 9 80 526.7780362294206 0 526.7778808474541 PEAK CID FTMS 0 0 0 7368 183560.421875 1.0 0 0.0 19 Unmodified _QALWLNPPN_ nc|ENSG00000157212|Q6ZW49-1|PAXIP1;ENST00000475066.1_1_7:154759501-154775093:-|nuORF;ENSG00000157212|ENST00000404141|PAXIP1;nc|ENSG00000157212|Q6ZW49-2|PAXIP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF 10.823927491677226 0.3028200641087142 3 H 1 9 11.99 0.0 0.0 1.1402 0.0 0.0 199.09524374614745 712.3470553033811 911.4422990495286 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 H 1.1402 - 36 + 1 1.991 35936.3 1.0 2272 5113 7368 HBL1_DMSO_200M_050219_1,7387 HBL1_DMSO_200M_050219_1,7387,QALWLNPPN False False AQLQQQHSL 38.964061 526.777880847454 1033867.0625 7368.0 nc|ENSG00000157212|Q6ZW49-1|PAXIP1;;ENST00000475066.1_1_7:154759501-154775093:-|nuORF;;ENSG00000157212|ENST00000404141|PAXIP1;;nc|ENSG00000157212|Q6ZW49-2|PAXIP1;;ENST00000457196.5_1_7:154735861-154782774:-|nuORF 0.6506284524997076 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7388 38.979 800.0 204350.0 25 0 12177.0 + 40238 VGSLDDPLVGQ 11 186 550.2848444026573 1098.5551358721143 2 550.2854492068291 MULTI CID FTMS 0 0 0 7368 162346.921875 1.0 0 0.0 20 Unmodified _VGSLDDPLVGQ_ REV__ENSG00000114353|ENST00000313601|GNAI2;REV__ENST00000490122.5_1_3:50289817-50295119:+|nuORF;REV__nc|ENSG00000114353|P04899-2|GNAI2;REV__nc|ENSG00000114353|P04899-3|GNAI2;REV__nc|ENSG00000114353|P04899-4|GNAI2;REV__nc|ENSG00000114353|P04899-5|GNAI2;REV__nc|ENSG00000114353|P04899-6|GNAI2 12.240655878213236 0.7805268987462184 3 SSAPV{[QG]|[NA]} 7 -1 24.245 0.0 0.0 2.207 0.0 0.0 454.2531605451188 0.0 454.2531605451188 0.0 -0.3693833666681456 -0.3693833666681456 0.0 0 0.5 0.0 0.805462187404089 0.0 SSAPV{[QG]|[NA]} 2.207 - 1028 1 1.991 128469.0 0.8100000023841858 2273 5113 7368 HBL1_DMSO_200M_050219_1,7388 HBL1_DMSO_200M_050219_1,7388,VGSLDDPLVGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7390 38.983 12.0 5040200.0 25 0 608260.0 15343 IPLTLHTV 8 80 447.2760150369352 892.5374771406705 2 447.2762634158134 MULTI CID FTMS 0 0 0 7389 5468543.0 0.8370776644607033 5 -0.5392837524414062 1 Unmodified _IPLTLHTV_ ENSG00000039600|ENST00000265007|SOX30;nc|ENSG00000039600|O94993-2|SOX30 32.116972079565 0.368454113111938 3 {I|L}PP 3 6 50.445 0.0 0.0 5.6519 0.0 0.0 0.0 582.3261413194739 582.3261413194739 40.779550148593486 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PP 5.6519 - 183 + 1 1.991 49989.6 1.0 2274 5114 7389 HBL1_DMSO_200M_050219_1,7390 HBL1_DMSO_200M_050219_1,7390,IPLTLHTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7391 38.985 20.0 3204400.0 25 0 411390.0 27509 PKLPPRGVG 9 65 307.52731452707565 919.560114181427 3 307.5271789431572 MULTI CID FTMS 0 0 0 7389 2504381.5 0.1773514178728833 -5 0.5413818359375 2 Unmodified _PKLPPRGVG_ ENSG00000169184|ENST00000302326|MN1 6.723162845929126 0.6799819581413107 3 PP 2 7 9.464 0.0 0.0 1.0292 0.0 0.0 338.2311571503578 384.1989840143188 722.4301411646766 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + PP 1.0292 + + 14 + 1 1.991 59312.2 1.0 2275 5114 7389 HBL1_DMSO_200M_050219_1,7391 HBL1_DMSO_200M_050219_1,7391,PKLPPRGVG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7392 38.986 78.0 1299500.0 25 0 174200.0 + 44709 YPHDPPKV 8 111 318.16782282383326 951.4816390717 3 318.1677429080009 MULTI CID FTMS 0 0 0 7389 819554.5625 0.0651922735793186 7 -0.6919021606445312 3 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 15.847184025352805 0.6768015514314958 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DY 4 5 19.169 0.0 0.0 2.0146 0.0 0.0 0.0 436.2560709724774 436.2560709724774 4.429248429059365 0.0 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DY 2.0146 - 123 1 1.991 85399.2 1.0 2276 5114 7389 HBL1_DMSO_200M_050219_1,7392 HBL1_DMSO_200M_050219_1,7392,YPHDPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7393 38.988 69.0 727890.0 25 0 79321.0 + 3687 DAFGHKSNI 9 85 494.7460153458141 0 494.7462341189384 PEAK CID FTMS 0 0 0 7389 771862.375 0.2655005405550432 2 -0.2077713012695312 4 Unmodified _DAFGHKSNI_ ENSG00000134058|ENST00000256443|CDK7;ENST00000512687.5_1_5:68530748-68551520:+|nuORF 47.7319792270244 0.0378718497375857 3 {M(Oxidation (M))|F}GH 3 6 24.882 0.0 0.0 2.5198 0.0 0.0 186.06359662903907 457.2417086236938 643.3053052527329 0.0 0.0 0.0 0.0 0 1.0189301784845295 0.0 0.0 0.0 + {M(Oxidation (M))|F}GH 2.5198 + + 95 + 1 1.991 45064.9 1.0 2277 5114 7389 HBL1_DMSO_200M_050219_1,7393 HBL1_DMSO_200M_050219_1,7393,DAFGHKSNI True True DAFGHKSNI 38.987971 494.746234118938 39510830.0 7389.0 ENSG00000134058|ENST00000256443|CDK7;;ENST00000512687.5_1_5:68530748-68551520:+|nuORF 8.487377325693766 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7394 38.991 167.0 658170.0 25 0 58507.0 -1 QSLGMCPQ 8 99 460.7011522092207 919.3877514852414 2 460.7016479372978 MULTI CID FTMS 0 0 0 7389 439428.03125 0.5329068142597446 2 -0.2077713012695312 5 Carbamidomethyl (C) _QSLGMC(Carbamidomethyl (C))PQ_ ENSG00000198691|ENST00000370225|ABCA4 26.88365393820708 0.4786498634179528 3 {[QS]|[NT]}{I|L}RPKP 7 -1 51.119 0.0 0.0 5.5601 0.0 0.0 0.0 109.88786287494148 109.88786287494148 29.69228530870048 0.0 0.0 0.0 0 0.8494850021680094 1.0 0.2614393726401688 0.3054621874040891 {[QS]|[NT]}{I|L}RPKP 5.5601 - 191 1 1.991 92486.0 1.0 2278 5114 7389 HBL1_DMSO_200M_050219_1,7394 HBL1_DMSO_200M_050219_1,7394,QSLGMCPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7395 38.995 185.0 424780.0 25 0 29472.0 + 13232 HHPDYNNEL 9 115 380.1684890100337 0 380.1686584353447 PEAK CID FTMS 0 0 0 7389 398620.75 1.0 0 0.0 6 Unmodified _HHPDYNNEL_ ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11 25.399314129420983 0.152124705672316 3 D 1 8 6.1141 0.0 0.0 0.80626 0.0 0.0 558.2059832917487 82.06692682437733 640.272910116126 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 + D 0.80626 + + 15 + 1 1.991 70389.0 1.0 2279 5114 7389 HBL1_DMSO_200M_050219_1,7395 HBL1_DMSO_200M_050219_1,7395,HHPDYNNEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7396 38.998 171.0 375400.0 25 0 22257.0 -1 PTMVNNTGVV 10 103 524.2604150289292 1046.5062771246585 2 524.2600585818291 MULTI CID FTMS 0 0 0 7389 363752.625 0.6544073001643428 1 -0.149993896484375 7 Oxidation (M) _PTM(Oxidation (M))VNNTGVV_ ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP 25.399314129420983 0.3980215340001851 3 {I|L}[EC]Q[QA]EKV 9 -1 + 40.205 0.0 0.0 3.8418 3.8418 83.313 0.0 0.0 0.0 13.839325726679132 11.271211393095244 11.271211393095244 16.686307739928832 0 0.5 0.0 1.1861818737241734 0.6643943297944485 {I|L}[EC]Q[QA]EKV;[{I|L}P][MD]KV[EC]{I|L};{I|L}[EC]HHAQP{I|L};[{I|L}P][MD]KVSEE;[QA]QEKV[EC]{I|L};[{I|L}P][RD]HHC(Carbamidomethyl (C)){I|L};[YQ]A[Y{M(Oxidation (M))|F}]EKV;[QA][AG]EKV[EC]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QA]KV[EC]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QA]KVSEE 3.8418;2.2473;2.1009;2.0903;1.8933;1.5047;1.4501;1.0134;0.69086;0.53378 -;-;-;-;-;-;-;-;-;- 383 + 1 1.991 55565.8 1.0 2280 5114 7389 HBL1_DMSO_200M_050219_1,7396 HBL1_DMSO_200M_050219_1,7396,PTMVNNTGVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7397 39.002 210.0 507290.0 25 0 67057.0 + 13133 HFIEKAHTL 9 120 548.3014457223717 1094.5883385115433 2 548.3044921755791 MULTI CID FTMS 0 0 0 7389 295350.75 0.5746420155077314 -1 0.1227951049804687 8 Unmodified _HFIEKAHTL_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19762333-19763700:-|nuORF;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 101.5434397834973 0.0101808482594519 3 H{M(Oxidation (M))|F}{I|L}EKAHT{I|L} 9 0 + 98.729 0.0 0.0 9.0197 9.0197 97.304 0.0 0.0 0.0 19.65227486541373 21.8909499391568 19.65227486541373 19.65227486541373 0 2.9291746928241125 1.0457574905606752 2.44681996139554 0.0 + + H{M(Oxidation (M))|F}{I|L}EKAHT{I|L};{I|L}[NG]{I|L}EKAHT{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EKAHT{I|L};H{M(Oxidation (M))|F}{I|L}EKA{I|L}TH;{[{M(Oxidation (M))|F}H]|[RQ]}R{[RE]|[WV]}HT{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}RKEEH{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EKATH{I|L};{I|L}[NG]{I|L}EKA{I|L}TH;{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}EKAHT{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}R{[RE]|[WV]}TH{I|L} 9.0197;7.2243;7.0198;6.8075;6.5067;6.4035;6.2687;5.9674;5.7827;5.7556 +;-;+;-;-;-;-;-;-;- + 3353 + 1 1.991 84871.1 1.0 2281 5114 7389 HBL1_DMSO_200M_050219_1,7397 HBL1_DMSO_200M_050219_1,7397,HFIEKAHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7398 39.008 344.0 362070.0 25 0 22323.0 + + 16187 MPKKDPVKI 9 163 352.54763696832674 1054.6210815051802 3 352.5472595095634 MULTI CID FTMS 0 0 0 7389 246631.515625 0.3343633630473339 4 -0.4090156555175781 9 Unmodified _IVFLNHLIS_ nc|ENSG00000232119|Q9ULC4-2|MCTS1;ENSG00000101898|ENST00000394552|MCTS2;ENSG00000232119|ENST00000371317|MCTS1;nc|ENSG00000232119|Q9ULC4-3|MCTS1;ENST00000479096.1_1_20:30135258-30136578:+|nuORF;ENST00000487133.1_1_X:119739298-119742228:+|nuORF 9.38312468134398 0.5871240394367778 3 [YV]KPV 5 -1 26.911 0.0 0.0 2.5517 0.0 0.0 0.0 465.2463707657141 465.2463707657141 1.072860652017365 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 [YV]KPV 2.5517 - 158 + 1 1.991 103257.2 1.0 2282 5114 7389 HBL1_DMSO_200M_050219_1,7398 HBL1_DMSO_200M_050219_1,7398,IVFLNHLIS False False MPKKDPVKI 39.008346 352.547259509563 7001587.25 7389.0 nc|ENSG00000232119|Q9ULC4-2|MCTS1;;ENSG00000101898|ENST00000394552|MCTS2;;ENSG00000232119|ENST00000371317|MCTS1;;nc|ENSG00000232119|Q9ULC4-3|MCTS1;;ENST00000479096.1_1_20:30135258-30136578:+|nuORF;;ENST00000487133.1_1_X:119739298-119742228:+|nuORF 3.7222420374552407 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7399 39.013 257.0 392610.0 25 0 23679.0 5668 DPFSSKHNV 9 148 344.1699168545561 0 344.1699096560478 PEAK CID FTMS 0 0 0 7389 218996.671875 1.0 0 0.0 10 Unmodified _DPFSSKHNV_ ENSG00000108055|ENST00000361804|SMC3 10.823927491677226 0.3028200641087142 3 G 1 9 5.4846 0.0 0.0 0.79912 0.0 0.0 164.06827501594972 462.22471033267817 626.2929853486279 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.79912 - 31 + 1 1.991 83705.5 1.0 2283 5114 7389 HBL1_DMSO_200M_050219_1,7399 HBL1_DMSO_200M_050219_1,7399,DPFSSKHNV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7400 39.026 732.0 178500.0 25 0 6520.7 -1 0 111 628.8887612827801 3139.4074240809005 5 629.2908813357353 MULTI CID FTMS 0 0 0 7389 232077.5625 0.1476241371625071 4 -0.4090156555175781 11 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WH]AQQN{I|L}[PS]GWTG 15 -1 62.594 0.0 0.0 1.9938 0.0 0.0 0.0 1416.6215686327366 1416.6215686327366 41.941811241770125 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.7059771852360797 1.0629529932484498 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WH]AQQN{I|L}[PS]GWTG 1.9938 - 25144 1 1.991 103104.7 1.0 2284 5114 7389 HBL1_DMSO_200M_050219_1,7400 HBL1_DMSO_200M_050219_1,7400, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7401 39.038 731.0 318130.0 25 0 31749.0 + -1 TAMPERDTV 9 182 510.7511024195065 1019.487651905813 2 510.7489196658134 MULTI CID FTMS 0 0 0 7389 230476.34375 0.524543861019162 2 -0.2077713012695312 12 Oxidation (M) _DAVLM(Oxidation (M))EVEV_ ENST00000290730.11_1_22:24179058-24180975:-|nuORF;nc|ENSG00000099958|Q96Q80-4|DERL3 20.453626601364224 0.2830276176381075 3 DAVKP[EC]MK 9 -1 + 47.179 0.0 0.0 4.6277 4.6277 74.429 0.0 0.0 0.0 2.8830657951422296 10.30617161898666 2.8830657951422296 1.9436014536676824 0 0.468765315847925 1.2218487496163564 0.4247425010840047 0.2134679910804404 DAVKP[EC]MK;DAV{I|L}ENTMK;TAMPP[SG]TMK;TAMP{[DA]|[EG]}RMK;TA[Q{I|L}]P[EC]MK;DAV[WD]RMK;DAV{I|L}A[DG]TMK;DAV{I|L}EGGTMK;{I|L}GDKP[EC]MK;{I|L}GD{I|L}ENTMK 4.6277;4.4371;3.9467;3.7238;3.7064;3.697;3.6193;3.5339;3.5178;3.3272 -;-;-;-;-;-;-;-;-;- 2834 + 1 1.991 174665.2 1.0 2285 5114 7389 HBL1_DMSO_200M_050219_1,7401 HBL1_DMSO_200M_050219_1,7401,DAVLMEVEV False False TAMPERDTV 39.038473 510.748919665813 1868213.25 7389.0 ENST00000290730.11_1_22:24179058-24180975:-|nuORF;;nc|ENSG00000099958|Q96Q80-4|DERL3 3.444562315940857 2.0 False 9.0 True non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 7402 39.041 149.0 526060.0 25 0 53816.0 26804 PAPPPPPPP 9 113 433.7420770129379 865.4696010926758 2 433.7425414919853 MULTI CID FTMS 0 0 0 7389 209501.90625 0.152264389807827 15 -0.8097915649414062 13 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;ENSG00000103495|ENST00000322945|MAZ;ENSG00000105429|ENST00000251268|MEGF8;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139687|ENST00000267163|RB1;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000158195|ENST00000618852|WASF2;ENSG00000165821|ENST00000537235|SALL2;ENSG00000167771|ENST00000301459|RCOR2;ENSG00000169862|ENST00000304623|CTNND2;ENSG00000171634|ENST00000306378|BPTF;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000182601|ENST00000331351|HS3ST4;ENSG00000184937|ENST00000452863|WT1;ENSG00000196367|ENST00000456197|TRRAP;ENSG00000197483|ENST00000598519|ZNF628;ENSG00000205177|ENST00000379011|C11orf91;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000272333|ENST00000420124|KMT2B;ENST00000263228.3_1_9:33817570-33817774:+|nuORF;ENST00000378204.6_1_8:119123785-119123992:-|nuORF;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;ENST00000592092.1_1_19:36224173-36224410:+|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000103495|P56270-2|MAZ;nc|ENSG00000103495|P56270-3|MAZ;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000169862|Q9UQB3-2|CTNND2;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;nc|nan|Q3C1V1-2|C11orf91;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000060749|ENST00000650167|QSER1;REV__ENSG00000077420|ENST00000376236|APBB1IP;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000108819|ENST00000612501|PPP1R9B;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000112320|ENST00000317357|SOBP;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__ENSG00000126464|ENST00000418929|PRR12;REV__ENSG00000136848|ENST00000408936|DAB2IP;REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000168874|ENST00000306279|ATOH8;REV__ENSG00000171450|ENST00000302625|CDK5R2;REV__ENSG00000176058|ENST00000409012|TPRN;REV__ENSG00000176165|ENST00000313071|FOXG1;REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENSG00000182484|ENST00000359512|WASH6P;REV__ENSG00000188620|ENST00000357878|HMX3;REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENSG00000247746|ENST00000500968|USP51;REV__ENSG00000274588|ENST00000611977|DGKK;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000400706.3_1_12:88275-90926:+|nuORF;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;REV__ENST00000557932.5_1_15:102513813-102516466:+|nuORF;REV__ENST00000602719.5_1_16:85784553-85784670:-|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000168874|Q96SQ7-2|ATOH8;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6;REV__nc|ENSG00000234769|A8MWX3|WASH4P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P;REV__nc|ENSG00000292372|Q9NQA3|WASH6P 56.04830969593885 0.0282699710924866 3 [PA]PPPP[YK] 8 3 + 38.979 0.0 0.0 4.5039 4.5039 84.7 0.0 0.0 0.0 11.497893043842788 6.989700043360188 6.989700043360188 13.645162531850872 0 1.110924374808178 1.5228787452803376 0.0 0.0 [PA]PPPP[YK];[YK]APP[YK];{[HG]|PP}APPP[YK];[PA][YK]P[YK];{[HG]|PP}PAPP[YK];[PA]P[YK][YK];[YK]PAP[YK];{[HG]|PP}PPAP[YK] 4.5039;2.9272;2.6436;2.4811;2.4646;1.703;1.5109;1.0482 -;-;-;-;-;-;-;- 140 1 1.991 69968.9 1.0 2286 5114 7389 HBL1_DMSO_200M_050219_1,7402 HBL1_DMSO_200M_050219_1,7402,PAPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7403 39.055 763.0 250250.0 25 0 31657.0 + 36452 SYYSSGSRASM 11 128 598.255929423438 0 598.2563354372978 PEAK CID FTMS 0 0 0 7389 198630.15625 0.6165845690815311 -1 0.1227951049804687 14 Unmodified _SYYSSGSRASM_ ENST00000515481.5_1_5:179041844-179042012:-|nuORF 59.05245873256422 0.0175464156431399 3 YSSG 4 7 43.844 0.0 0.0 3.6705 0.0 0.0 250.09436077206948 547.2331258223539 797.3274865944234 0.0 0.0 0.0 0.0 0 1.1989700043360187 0.0 1.2302046884880935 0.0 + YSSG 3.6705 + + 728 + 1 1.991 141116.3 1.0 2287 5114 7389 HBL1_DMSO_200M_050219_1,7403 HBL1_DMSO_200M_050219_1,7403,SYYSSGSRASM True True SYYSSGSRASM 39.054648 598.256335437298 2344551.25 7389.0 ENST00000515481.5_1_5:179041844-179042012:-|nuORF 6.9882017771403 2.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7404 39.07 800.0 84727.0 25 0 4781.9 -1 0 78 842.8900105973986 3367.530936523194 4 843.3915283083916 MULTI CID FTMS 0 0 0 7389 184536.515625 0.4425978244445537 2 -0.2077713012695312 15 3 NV 2 -1 10.969 0.0 0.0 0.32573 0.0 0.0 1092.4746247345397 2058.888382653752 3151.3630073882905 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NV 0.32573 - 147 + 1 1.991 52439.7 0.800000011920929 2288 5114 7389 HBL1_DMSO_200M_050219_1,7404 HBL1_DMSO_200M_050219_1,7404, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7405 39.084 800.0 221910.0 25 0 8033.3 + -1 AVPSSQPSV 9 109 871.6471045619412 3482.5593123813646 4 871.8973876833916 MULTI CID FTMS 0 0 0 7389 180685.453125 1.0 0 0.0 16 ENSG00000110107|ENST00000227524|PRPF19 3 NN{[SA]|[TG]} 4 -1 25.049 0.0 0.0 0.71928 0.0 0.0 3078.3886603868373 0.0 3078.3886603868373 0.0 8.851518780601918 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.805462187404089 NN{[SA]|[TG]} 0.71928 - 329 1 1.991 123967.0 0.7699999809265137 2289 5114 7389 HBL1_DMSO_200M_050219_1,7405 HBL1_DMSO_200M_050219_1,7405, False False AVPSSQPSV 39.083823 871.897387683392 2830033.0 7389.0 ENSG00000110107|ENST00000227524|PRPF19 3.754185756047567 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7406 39.098 800.0 202960.0 25 0 32338.0 + 22139 LPPQQQQRI 9 149 554.316451418148 1106.6183499030958 2 554.3160888552666 MULTI CID FTMS 0 0 0 7389 155289.140625 0.71873966746709 7 -0.6919021606445312 17 Unmodified _LPPQQQQRI_ ENSG00000109606|ENST00000336812|DHX15;ENST00000336812.4_1_4:24550520-24550565:-|nuORF 26.88365393820708 0.1891292719743517 3 {I|L}PPQ 4 5 56.428 0.0 0.0 5.0991 0.0 0.0 0.0 668.3498464122162 668.3498464122162 45.4369761464285 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3252574989159953 + {I|L}PPQ 5.0991 + + 1544 + 1 1.991 125978.4 0.9300000071525574 2290 5114 7389 HBL1_DMSO_200M_050219_1,7406 HBL1_DMSO_200M_050219_1,7406,LPPQQQQRI False True LPPQQQQRI 39.097654 554.316088855267 8092884.0 7389.0 ENSG00000109606|ENST00000336812|DHX15;;ENST00000336812.4_1_4:24550520-24550565:-|nuORF 3.221574068069458 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7407 39.113 800.0 170600.0 25 0 11504.0 -1 GSTFSDCLMV 10 174 538.2251013850922 0 538.2679931521416 PEAK CID FTMS 0 0 0 7389 60709.515625 0.8615202624422249 4 -0.4090156555175781 18 Oxidation (M) _GSTFSDCLM(Oxidation (M))V_ ENSG00000123636|ENST00000392783|BAZ2B;nc|ENSG00000226266|Q9UIF8-2|BAZ2B;nc|ENSG00000226266|Q9UIF8-3|BAZ2B;nc|ENSG00000226266|Q9UIF8-4|BAZ2B;nc|ENSG00000226266|Q9UIF8-5|BAZ2B 6.723162845929126 0.3961065659209837 3 PP 2 -1 8.5835 0.0 0.0 0.79888 0.0 0.0 346.0995429506244 531.2071943586687 877.3067373092931 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.79888 - 191 + 1 1.991 108412.9 0.8899999856948853 2291 5114 7389 HBL1_DMSO_200M_050219_1,7407 HBL1_DMSO_200M_050219_1,7407,GSTFSDCLMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7408 39.126 800.0 297000.0 25 0 45408.0 + -1 MAPPAHKSI 9 190 484.25547192333687 966.4963909134738 2 484.2531616091728 MULTI CID FTMS 0 0 0 7389 100936.90625 0.7878316130514221 4 -0.4090156555175781 19 Oxidation (M) _M(Oxidation (M))APPAHKSI_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 16.149105407346934 0.3995459350917656 3 {[MS]|[{M(Oxidation (M))|F}A]}PP[HA]KTV 9 -1 + 37.615 0.0 0.0 3.8919 3.8919 71.842 0.0 0.0 0.0 20.782034970962343 1.1746225136532686 1.1746225136532686 1.7609125905568137 0 0.3252574989159953 1.6989700043360187 0.2134679910804404 0.0 {[MS]|[{M(Oxidation (M))|F}A]}PP[HA]KTV;{[MS]|[{M(Oxidation (M))|F}A]}PP[HA]KS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}PP[HA]TKV;{[MS]|[{M(Oxidation (M))|F}A]}{[DS]|[MA]|[CV]|TT}VTKTV;{[MS]|[{M(Oxidation (M))|F}A]}{[DS]|[MA]|[CV]|TT}VTKS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{[DS]|[MA]|[CV]|TT}VTTKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}]KD{[CT]|[{M(Oxidation (M))|F}G]};[VP]{[WT]|[RM]}[PA]PCP;[AG]{I|L}{[QN]|[E{I|L}]|[KN]}[PA]PCP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}]K{[MG]|[TS]}M 3.8919;3.7097;3.5676;2.2943;2.1121;1.97;1.4302;0.92029;0.83006;0.64416 -;+;-;-;-;-;-;-;-;- + 440 + 1 1.991 182629.9 0.6600000262260437 2292 5114 7389 HBL1_DMSO_200M_050219_1,7408 HBL1_DMSO_200M_050219_1,7408,MAPPAHKSI False False MAPPAHKSI 39.126489 484.253161609173 1304349.5 7389.0 ENSG00000108021|ENST00000695737|TASOR2;;nc|ENSG00000108021|Q5VWN6-2|TASOR2 4.326013008753459 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7409 39.129 128.0 610710.0 25 0 140070.0 + 13185 HGFSPRTV 8 82 450.73782570917626 899.4610984851525 2 450.7375671267509 MULTI CID FTMS 0 0 0 7389 112317.078125 0.1163406993998631 -2 0.2579994201660156 20 Unmodified _HGFSPRTV_ ENST00000494664.5_1_3:119217469-119217535:+|nuORF 41.8396318013385 0.2035142800366642 3 HG{M(Oxidation (M))|F}S[RP]TV 8 0 + 66.306 0.0 0.0 7.3717 7.3717 94.781 0.0 0.0 0.0 41.563604038135466 9.974894671098184 9.974894671098184 20.969100130080555 0 1.5356668758921828 1.5228787452803376 0.0 0.3494850021680094 + + HG{M(Oxidation (M))|F}S[RP]TV;HGKK{[QC]|[C(Carbamidomethyl (C))A]}TV;H[YQ][RP]TV;[WH][KA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V;{[HG]|PP}[RV][DV]{[MS]|[{M(Oxidation (M))|F}A]} 7.3717;5.0404;2.2716;0.41286;0.079686 +;-;-;-;- + 111 + 1 1.991 66412.4 1.0 2293 5114 7389 HBL1_DMSO_200M_050219_1,7409 HBL1_DMSO_200M_050219_1,7409,HGFSPRTV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7411 39.133 6.7 8510500.0 25 0 1315300.0 + 24262 MAPPPPRSV 9 53 476.2574249361268 950.5002969390536 2 476.2577697634697 MULTI CID FTMS 0 0 0 7410 8523963.0 0.8047444061571334 2 -0.1373329162597656 1 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 12.240655878213236 0.5053430591993562 3 {[DS]|[MA]|[CV]|TT}PPP 5 4 43.015 0.0 0.0 4.5256 0.0 0.0 0.0 454.2421969049438 454.2421969049438 39.916440611282624 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {[DS]|[MA]|[CV]|TT}PPP 4.5256 + + 19 + 1 1.986 47572.0 1.0 2294 5115 7410 HBL1_DMSO_200M_050219_1,7411 HBL1_DMSO_200M_050219_1,7411,MAPPPPRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7412 39.135 12.0 3863500.0 25 0 381120.0 + 13230 HHPDYNNEL 9 86 569.7491078049561 1137.483662676712 2 569.7494384646416 MULTI CID FTMS 0 0 0 7410 4900886.0 0.7816414453446316 1 -0.0577774047851562 2 Unmodified _HHPDYNNEL_ ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11 25.399314129420983 0.2080152500878129 3 HH[DP]YNNE{I|L} 9 0 + 45.391 0.0 0.0 3.9905 3.9905 81.218 0.0 0.0 0.0 14.030899869919434 9.137342758552691 9.137342758552691 9.208187539523747 0 0.1989700043360188 1.3010299956639813 0.0 0.4247425010840047 + + HH[DP]YNNE{I|L};HH[DP]YGGNE{I|L};HH[DP]YNGGE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NNY[HC]D{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGNY[HC]D{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NGGY[HC]D{I|L};[YN]WWNNE{I|L};[YN]WWNGGE{I|L};[YN]WWGGNE{I|L};[YN]PDNHHE{I|L} 3.9905;3.181;3.181;2.757;1.9475;1.9475;1.5343;0.71999;0.71999;0.56021 +;-;-;-;-;-;-;-;-;- + 128 1 1.986 36846.9 1.0 2295 5115 7410 HBL1_DMSO_200M_050219_1,7412 HBL1_DMSO_200M_050219_1,7412,HHPDYNNEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7413 39.136 7.6 6659800.0 25 0 1140300.0 + 26134 NPSMPQRTV 9 70 515.2607408698069 1028.5069288064135 2 515.2612182497978 MULTI CID FTMS 0 0 0 7410 7887142.0 1.0 0 0.0 3 Unmodified _NPSMPQRTV_ ENSG00000197943|ENST00000564138|PLCG2 43.9818466556824 0.0535980856389242 3 NPSMPQR{[TV]|[{I|L}S]} 9 0 + 74.218 0.0 0.0 7.2161 7.2161 91.364 0.0 0.0 0.0 58.65987537940164 2.922152515121226 2.922152515121226 9.208187539523747 0 0.805462187404089 1.6989700043360187 0.0 0.0 + + NPSMPQR{[TV]|[{I|L}S]};NPSMP[AG]R{[TV]|[{I|L}S]};NP[WE]QR{[TV]|[{I|L}S]};NP[WE][AG]R{[TV]|[{I|L}S]};N[WE]PQR{[TV]|[{I|L}S]};GG[WE]P[AG]R{[TV]|[{I|L}S]} 7.2161;6.3208;4.7588;3.8583;2.6208;1.7203 +;-;-;-;-;- + 94 + 1 1.986 44474.9 1.0 2296 5115 7410 HBL1_DMSO_200M_050219_1,7413 HBL1_DMSO_200M_050219_1,7413,NPSMPQRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7414 39.137 14.0 3552800.0 25 0 425800.0 + 13135 HFIEKAHTL 9 83 365.8696250484877 0 365.8697387576103 PEAK CID FTMS 0 0 0 7410 3793798.5 1.0 0 0.0 4 Unmodified _HFIEKAHTL_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19762333-19763700:-|nuORF;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 49.52724829834842 0.0329615201929619 3 {M(Oxidation (M))|F} 1 8 5.4846 0.0 0.0 0.75159 0.0 0.0 473.5915969834756 106.04170404605702 579.6333010295326 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.75159 + + 52 + 1 1.986 48278.3 1.0 2297 5115 7410 HBL1_DMSO_200M_050219_1,7414 HBL1_DMSO_200M_050219_1,7414,HFIEKAHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7415 39.138 15.0 4083200.0 25 0 630350.0 + 35759 SVIKELRKA 9 65 348.5573418803318 1042.6501962411955 3 348.5571777224541 MULTI CID FTMS 0 0 0 7410 3778218.0 1.0 0 0.0 5 Unmodified _SVIKELRKA_ ENSG00000204899|ENST00000377818|MZT1 31.26834338654808 0.1333407332142048 3 SV{I|L}KE{I|L} 6 3 76.899 0.0 0.0 7.3753 0.0 0.0 0.0 370.2202852838501 370.2202852838501 69.90926274548464 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.4247425010840047 + SV{I|L}KE{I|L} 7.3753 + + 85 + 1 1.986 57009.1 1.0 2298 5115 7410 HBL1_DMSO_200M_050219_1,7415 HBL1_DMSO_200M_050219_1,7415,SVIKELRKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7416 39.139 23.0 2080100.0 25 0 244330.0 -1 MPPPPPQGV 9 73 468.2362839438316 934.4580149544632 2 468.2365600466728 MULTI CID FTMS 0 0 0 7410 2551810.5 0.7960785540180736 3 -0.2590217590332031 6 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 34.18733598223924 0.1073653526364521 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 5 -1 19.169 0.0 0.0 2.0513 0.0 0.0 0.0 396.1874023581258 396.1874023581258 -0.5237875363565792 0.0 -0.5237875363565792 0.0 0 0.2742275032520141 0.0 0.5 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 2.0513 + + 142 1 1.986 43950.2 1.0 2299 5115 7410 HBL1_DMSO_200M_050219_1,7416 HBL1_DMSO_200M_050219_1,7416,MPPPPPQGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7417 39.14 21.0 2682900.0 25 0 280620.0 + 24136 LYQEGAKM 8 80 470.23448680635727 938.4544206795146 2 470.2345458865166 MULTI CID FTMS 0 0 0 7410 2355353.25 0.8811664332674054 -1 0.149993896484375 7 Unmodified _LYQEGAKM_ ENSG00000173801|ENST00000393931|JUP 54.773552608820026 0.1167943196628344 3 {I|L}YQEGAKM 8 0 + 81.54 0.0 0.0 8.6888 8.6888 82.599 0.0 0.0 0.0 67.53164374950266 11.638568026386691 11.638568026386691 0.389180660303694 0 0.3494850021680094 2.0 0.7742275032520141 0.5 + + {I|L}YQEGAKM;{I|L}YQEQKM;{I|L}Y[AG]EGAKM;{I|L}Y[AG]EQKM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[YQ][QP]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 8.6888;8.6473;7.7018;7.6531;1.0092;0.026179;0.014916 +;-;-;-;-;-;- + 218 + 1 1.986 47432.6 1.0 2300 5115 7410 HBL1_DMSO_200M_050219_1,7417 HBL1_DMSO_200M_050219_1,7417,LYQEGAKM True True LYQEGAKM 39.140445 470.2349 13871501.0 7410.0 ENSG00000173801|ENST00000393931|JUP 6.415081183115642 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7418 39.142 25.0 2409900.0 25 0 346400.0 + 15693 IQRLETMK 8 75 509.7884080578552 1017.5622631825104 2 509.7895385622978 MULTI CID FTMS 0 0 0 7410 1995590.875 0.498292977934654 -2 0.2727890014648437 8 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 MTMK 4 -1 46.23 0.0 0.0 4.5432 0.0 0.0 508.3141685553604 0.0 508.3141685553604 0.0 23.04235956215813 0.0 0.0 0 1.424742501084005 0.0 0.0 0.3054621874040891 MTMK 4.5432 - 87 + 1 1.986 51420.8 1.0 2301 5115 7410 HBL1_DMSO_200M_050219_1,7418 HBL1_DMSO_200M_050219_1,7418,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7419 39.143 30.0 1699600.0 25 0 156070.0 + 3651 DAEMTTRMV 9 79 535.2358917733172 1068.4572306134344 2 535.2363769412041 MULTI CID FTMS 0 0 0 7410 1945774.625 0.4751657167542666 -3 0.4079933166503906 9 Oxidation (M) _DAEM(Oxidation (M))TTRMV_ ENSG00000205220|ENST00000358514|PSMB10 49.55428908609986 0.0413471690215031 3 {[DA]|[EG]}E{M(Oxidation (M))|F}TTRMV 9 0 + 79.258 0.0 0.0 7.418 7.418 93.899 0.0 0.0 0.0 61.823225828623166 6.843891274137917 6.843891274137917 13.578409410397484 0 1.25 2.0 0.805462187404089 0.0 + + {[DA]|[EG]}E{M(Oxidation (M))|F}TTRMV;{[DA]|[EG]}{M(Oxidation (M))|F}ETTRMV;[{M(Oxidation (M))|F}T]RTT{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H];{[DA]|[EG]}{M(Oxidation (M))|F}DDTRMV;{[DA]|[EG]}E{M(Oxidation (M))|F}[KS]HHV;[{I|L}P]{[HG]|PP}TT{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H];{[DA]|[EG]}E[{M(Oxidation (M))|F}T]NHHV;W{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PS]RMV;[{M(Oxidation (M))|F}T]RTT[DP][EC];{[DA]|[EG]}{M(Oxidation (M))|F}E[KS]HHV 7.418;6.1472;4.5583;4.2765;4.1672;4.1193;3.2062;2.9897;2.9417;2.8964 +;-;-;-;-;-;-;-;-;- + 275 + 1 1.986 44468.4 1.0 2302 5115 7410 HBL1_DMSO_200M_050219_1,7419 HBL1_DMSO_200M_050219_1,7419,DAEMTTRMV True False DAEMTTRMV 39.142801 535.236376941204 86756064.0 7410.0 ENSG00000205220|ENST00000358514|PSMB10 8.54204829533895 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7420 39.15 376.0 741770.0 25 0 98667.0 -1 0 63 1179.8257557002155 3536.4554377008467 3 1180.494921863079 MULTI CID FTMS 0 0 0 7410 1062323.125 0.5539932878731146 -2 0.2727890014648437 10 3 Y{M(Oxidation (M))|F}G 3 -1 9.0411 0.0 0.0 0.25565 0.0 0.0 945.3001165111968 2220.9800836841123 3166.280200195309 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F}G 0.25565 - 59 + 1 1.986 200040.5 1.0 2303 5115 7410 HBL1_DMSO_200M_050219_1,7420 HBL1_DMSO_200M_050219_1,7420, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7421 39.152 121.0 817430.0 25 0 106070.0 + 21593 LPKPPGRGV 9 81 460.78694340186655 919.5593338705332 2 460.7873718142509 MULTI CID FTMS 0 0 0 7410 774495.6875 0.3574982266350586 -3 0.4079933166503906 11 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 26.88365393820708 0.1891292719743517 3 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG 8 5 64.602 0.0 0.0 7.0253 0.0 0.0 0.0 68.05138574771718 68.05138574771718 56.01850649356642 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3494850021680094 0.3054621874040891 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG 7.0253 - 132 + 1 1.986 82467.5 1.0 2304 5115 7410 HBL1_DMSO_200M_050219_1,7421 HBL1_DMSO_200M_050219_1,7421,LPKPPGRGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7422 39.154 91.0 505000.0 25 0 44428.0 -1 0 59 603.2771949145964 3011.3495922399816 5 603.4781982302666 MULTI CID FTMS 0 0 0 7410 686749.1875 0.9282103461617088 1 -0.0577774047851562 12 3 Q 1 -1 6.9897 0.0 0.0 0.23211 0.0 0.0 2318.065885494386 562.2030123346311 2880.268897829017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 Q 0.23211 - 5 + 1 1.986 42777.6 1.0 2305 5115 7410 HBL1_DMSO_200M_050219_1,7422 HBL1_DMSO_200M_050219_1,7422, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7423 39.157 120.0 400890.0 25 0 17886.0 -1 0 63 753.8443867622675 3011.34844118267 4 754.3462402224541 MULTI CID FTMS 0 0 0 7410 631594.5625 1.0 0 0.0 13 3 QGSH{[YC]|[HE]} 6 -1 25.718 0.0 0.0 0.85405 0.0 0.0 2318.066573311477 0.0 2318.066573311477 0.0 17.04628427264403 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.5 QGSH{[YC]|[HE]} 0.85405 - 78 + 1 1.986 42237.5 1.0 2306 5115 7410 HBL1_DMSO_200M_050219_1,7423 HBL1_DMSO_200M_050219_1,7423, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7424 39.159 110.0 620930.0 25 0 71973.0 + 4853 DGAPPPNQI 9 109 454.72708443755056 907.4396159419013 2 454.7273132205009 MULTI CID FTMS 0 0 0 7410 612598.25 0.3439903400543179 -3 0.4079933166503906 14 Unmodified _DGAPPPNQI_ ENSG00000184007|ENST00000647444|PTP4A2;ENST00000532001.6_1_1:32374455-32378590:-|nuORF;nc|ENSG00000184007|Q12974-3|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2 67.83816525789305 0.0219346420158844 3 [DG]APP{I|L}P 7 4 48.003 0.0 0.0 5.29 0.0 0.0 0.0 257.0844273034824 257.0844273034824 23.338290420358867 0.0 0.0 0.0 0 1.424742501084005 1.5228787452803376 0.4538271422956003 0.0 [DG]APP{I|L}P 5.29 - 300 1 1.986 55860.6 1.0 2307 5115 7410 HBL1_DMSO_200M_050219_1,7424 HBL1_DMSO_200M_050219_1,7424,DGAPPPNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7425 39.161 106.0 776850.0 25 0 90308.0 + 18523 KYQHTGAVL 9 105 339.52216575811144 1015.5446678745344 3 339.5218994021416 MULTI CID FTMS 0 0 0 7410 569160.5625 0.9673452673576955 -1 0.149993896484375 15 Unmodified _KYQHTGAVL_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 14.838274106304384 0.4350285940865338 3 Q{[SA]|[TG]}AV{I|L} 6 3 17.338 0.0 0.0 1.7073 0.0 0.0 428.2278004376969 0.0 428.2278004376969 0.0 1.8534156036097509 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.75 Q{[SA]|[TG]}AV{I|L} 1.7073 - 206 1 1.986 71777.4 1.0 2308 5115 7410 HBL1_DMSO_200M_050219_1,7425 HBL1_DMSO_200M_050219_1,7425,KYQHTGAVL False True KYQHTGAVL 39.161151 339.521899402142 3307585.75 7410.0 nc|ENSG00000154473|O43684-2|BUB3;;ENSG00000154473|ENST00000368865|BUB3 3.2878947257995605 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7426 39.169 467.0 426300.0 25 0 26682.0 2078 APPMPRAKENE 11 124 620.3132969374445 1238.612040941689 2 620.3127929568291 MULTI CID FTMS 0 0 0 7410 527016.3125 0.5729509737792673 -18 1.5210838317871094 16 Unmodified _APPMPRAKENE_ ENSG00000156970|ENST00000287598|BUB1B;ENST00000559461.1_1_15:40475930-40477631:+|nuORF;nc|ENSG00000156970|O60566-2|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 17.11289562659939 0.6791789249425932 3 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP[QP]N 12 9 {NN|[MP]|[D{I|L}]|[EV]}PA + + 75.003 20.054 5.0619 6.0554 6.0554 59.193 0.0 0.0 0.0 0.0 48.04505008770171 0.0 0.0 0 2.774227503252014 0.0 0.0 1.6906140654642812 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP[QP]N 6.0554 - 3528 + 1 1.986 150070.9 1.0 2309 5115 7410 HBL1_DMSO_200M_050219_1,7426 HBL1_DMSO_200M_050219_1,7426,APPMPRAKENE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7427 39.178 470.0 457760.0 25 0 30479.0 + 35761 SVIKELRKA 9 170 522.3317517385157 1042.6489505438312 2 522.3317748904228 MULTI CID FTMS 0 0 0 7410 509588.0625 1.0 0 0.0 17 Unmodified _SVIKELRKA_ ENSG00000204899|ENST00000377818|MZT1 49.52724829834842 0.0414064571532091 3 [VS]{I|L}KE{I|L}RKA 9 0 + 73.812 0.0 0.0 7.0793 7.0793 94.575 0.0 0.0 0.0 53.83655773640937 11.284853853988537 11.284853853988537 31.707166370911523 0 1.6624379954164592 2.0 0.3252574989159953 1.004432191740108 + + [VS]{I|L}KE{I|L}RKA;[VS]{I|L}KVK{I|L}WA;[VS]{I|L}[W{I|L}]KVKA;[VS]{I|L}KV[W{I|L}]KA;[VS]GV[KQ]KVKA;[VS]GV[{I|L}T]{I|L}RKA;[VS]GV[{I|L}T]{I|L}GVKA;[VS]GV[{I|L}A]K{I|L}[VS]A;[VS]GV[{I|L}A]{[TV]|[{I|L}S]}VKA;[VS]{I|L}[W{I|L}]K{I|L}[KG] 7.0793;4.0383;3.4736;3.2631;3.0266;2.9183;2.6828;2.3349;2.2033;1.8828 +;-;-;-;-;-;-;-;-;- + 1026 + 1 1.986 163861.6 1.0 2310 5115 7410 HBL1_DMSO_200M_050219_1,7427 HBL1_DMSO_200M_050219_1,7427,SVIKELRKA True True SVIKELRKA 39.177764 522.331774890423 58605022.5 7410.0 ENSG00000204899|ENST00000377818|MZT1 0.6133728424708048 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7428 39.18 82.0 1429200.0 25 0 163740.0 + 32614 SAYDNVNKV 9 127 505.2511187201961 1008.4876845071924 2 505.2511169314384 MULTI CID FTMS 0 0 0 7410 501710.21875 0.0513964520625927 -2 0.2727890014648437 18 Unmodified _SAYDNVNKV_ ENSG00000100030|ENST00000215832|MAPK1;nc|ENSG00000100030|P28482-2|MAPK1 62.57269311338072 0.0246576765497938 3 {[SA]|[TG]}YDNVNKV 9 0 + 79.055 0.0 0.0 7.839 7.839 93.362 0.0 0.0 0.0 50.14062833612215 10.96887856256754 10.96887856256754 9.208187539523763 0 0.8600233437409719 2.0 0.0 1.579689690656103 + + {[SA]|[TG]}YDNVNKV;{[SA]|[TG]}YDGGVNKV;{[SA]|[TG]}YDNVGGKV;{[SA]|[TG]}YDGGVGGKV;{[SA]|[TG]}V[MD]HR{[HG]|PP};{[SA]|[TG]}V[TP][QP][Y{M(Oxidation (M))|F}];{[SA]|[TG]}V[QT][YN]QV;{[SA]|[TG]}V[C(Carbamidomethyl (C))K]{[NV]|[RG]}[MT];{[SA]|[TG]}V[QT]{[HG]|PP}[Y{M(Oxidation (M))|F}];{[SA]|[TG]}[TP]{M(Oxidation (M))|F}HR{[HG]|PP} 7.839;6.9259;6.9259;6.0172;3.0279;2.6333;2.5474;2.4897;2.4387;2.3348 +;-;-;-;-;-;-;-;-;- + 1048 + 1 1.986 93144.2 1.0 2311 5115 7410 HBL1_DMSO_200M_050219_1,7428 HBL1_DMSO_200M_050219_1,7428,SAYDNVNKV True True SAYDNVNKV 39.179603 505.251116931438 43501344.0 7410.0 ENSG00000100030|ENST00000215832|MAPK1;;nc|ENSG00000100030|P28482-2|MAPK1 7.382217407226562 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7429 39.182 144.0 534350.0 25 0 56807.0 18893 LAVGKDGG 8 100 358.70061807802006 715.3866832228401 2 358.7003661990166 MULTI CID FTMS 0 0 0 7410 476892.625 0.1743555617871337 2 -0.1373329162597656 19 Unmodified _LAVGKDGG_ ENST00000376687.3_1_X:48555153-48557380:+|nuORF 5.760428011301431 0.7893668129297577 3 {[CP]|[EA]}{I|L}ERV 6 7 + 23.677 0.0 0.0 3.3096 3.3096 80.665 0.0 0.0 0.0 13.92285995485654 7.746907182741367 7.746907182741367 10.523787536356576 0 0.0 0.0 0.2742275032520141 0.0 {[CP]|[EA]}{I|L}ERV;{[CP]|[EA]}{I|L}VWV;{[CP]|[EA]}V{I|L}WV;{[CP]|[EA]}{I|L}[RD]{I|L};{[CP]|[EA]}V{[RE]|[WV]}{I|L} 3.3096;1.8386;1.5924;1.0476;0.41813 -;-;-;-;- 49 + 1 1.986 65466.9 1.0 2312 5115 7410 HBL1_DMSO_200M_050219_1,7429 HBL1_DMSO_200M_050219_1,7429,LAVGKDGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7430 39.187 163.0 755690.0 25 0 159350.0 + 6097 DSRPQLRSV 9 107 529.29158716097 1056.56862138874 2 529.2916747927666 MULTI CID FTMS 0 0 0 7410 450107.21875 0.7230229355509322 -1 0.149993896484375 20 Unmodified _DSRPQLRSV_ ENSG00000063241|ENST00000425675|ISOC2;ENST00000591718.1_1_19:55966993-55972941:-|nuORF;nc|ENSG00000063241|Q96AB3-2|ISOC2 43.9818466556824 0.0535980856389242 3 {[DS]|[MA]|[CV]|TT}R[QP]{I|L}RW 8 2 + 36.731 0.0 0.0 3.4764 3.4764 80.459 0.0 0.0 0.0 3.4948500216800937 9.987008813566796 3.4948500216800937 9.262137858390812 0 1.1307196863200843 0.0 0.0 0.6549471895720984 {[DS]|[MA]|[CV]|TT}R[QP]{I|L}RW;{[DS]|[MA]|[CV]|TT}R[QP]{I|L}[VG]W 3.4764;2.5998 -;- 208 1 1.986 97927.4 1.0 2313 5115 7410 HBL1_DMSO_200M_050219_1,7430 HBL1_DMSO_200M_050219_1,7430,DSRPQLRSV True True DSRPQLRSV 39.186868 529.291674792767 4370028.0 7410.0 ENST00000591718.1_1_19:55966993-55972941:-|nuORF;;ENSG00000063241|ENST00000425675|ISOC2;;nc|ENSG00000063241|Q96AB3-2|ISOC2 4.994040012359619 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7432 39.199 598.0 232470.0 25 0 15427.0 + 4314 DARPSVNAV 9 172 464.745862217338 927.477171501476 2 464.7462341189384 MULTI CID FTMS 0 0 0 7431 175717.53125 0.0625424219191987 4 -0.425140380859375 1 Unmodified _DARPSVNAV_ ENSG00000087053|ENST00000346299|MTMR2;ENSG00000171100|ENST00000370396|MTM1;nc|ENSG00000087053|Q13614-2|MTMR2;nc|ENSG00000171100|Q13496-2|MTM1 24.99096001346401 0.2132109383330889 3 {[DA]|[EG]}R[PS]VNAV 9 0 + 52.616 0.0 0.0 5.673 5.673 86.643 0.0 0.0 0.0 9.5682631808328 33.01100100939984 9.5682631808328 9.208187539523747 0 0.9247425010840048 1.154901959985743 0.3737125054200235 0.0 + + {[DA]|[EG]}R[PS]VNAV;{[DA]|[EG]}R[PS]VGGAV;{[DA]|[EG]}R[KP]GDAV;{[QV]|[N{I|L}]|[RA]|[KV]}D[PS]VNAV;{[NV]|[RG]}[PS]EVNAV;[PS]{[NV]|[RG]}EVNAV;[DG][KP]RADAV;{[QV]|[N{I|L}]|[RA]|[KV]}D[PS]VGGAV;[VS]YY{I|L}NAV;{[NV]|[RG]}[PS]D{I|L}NAV 5.673;4.6802;4.079;3.9073;3.377;3.2297;3.0558;2.9145;2.6637;2.4322 +;-;-;-;-;-;-;-;-;- + 793 1 1.986 110524.2 1.0 2314 5116 7431 HBL1_DMSO_200M_050219_1,7432 HBL1_DMSO_200M_050219_1,7432,DARPSVNAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7433 39.201 88.0 801850.0 25 0 87549.0 -1 MQGEMDRKC 9 95 577.7404647521475 1153.466376571095 2 577.7414428591728 MULTI CID FTMS 0 0 0 7431 772225.375 0.2504110349747575 -1 0.0577774047851562 2 Carbamidomethyl (C) _MQGEMDRKC(Carbamidomethyl (C))_ ENSG00000015171|ENST00000381604|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;nc|ENSG00000015171|Q15326-3|ZMYND11;nc|ENSG00000015171|Q15326-4|ZMYND11;nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-6|ZMYND11 25.399314129420983 0.2080152500878129 3 {[DA]|[EG]}MQV{M(Oxidation (M))|F}Q[C(Carbamidomethyl (C))R] 9 -1 + 71.423 0.0 0.0 6.1921 6.1921 85.189 0.0 0.0 0.0 3.7987937295688567 56.35750781841381 3.7987937295688567 6.249387366082999 0 2.3494850021680094 2.0 0.5866968715561641 0.0 {[DA]|[EG]}MQV{M(Oxidation (M))|F}Q[C(Carbamidomethyl (C))R];{[DA]|[EG]}MQ{M(Oxidation (M))|F}VQ[C(Carbamidomethyl (C))R];{[DA]|[EG]}MQ{M(Oxidation (M))|F}QV[C(Carbamidomethyl (C))R];{[DA]|[EG]}M[AG]V{M(Oxidation (M))|F}Q[C(Carbamidomethyl (C))R];{[DA]|[EG]}MQV{M(Oxidation (M))|F}[AG][C(Carbamidomethyl (C))R];{[DA]|[EG]}M[AG]{M(Oxidation (M))|F}VQ[C(Carbamidomethyl (C))R];{[DA]|[EG]}MQ{M(Oxidation (M))|F}V[AG][C(Carbamidomethyl (C))R];{[DA]|[EG]}MQ{M(Oxidation (M))|F}[AG]V[C(Carbamidomethyl (C))R];{[DA]|[EG]}M[AG]{M(Oxidation (M))|F}QV[C(Carbamidomethyl (C))R];{[DA]|[EG]}M[AG]V{M(Oxidation (M))|F}[AG][C(Carbamidomethyl (C))R] 6.1921;5.6503;5.4976;5.3938;5.3938;4.852;4.852;4.6993;4.6993;4.5992 -;-;-;-;-;-;-;-;-;- 363 1 1.986 58539.7 1.0 2315 5116 7431 HBL1_DMSO_200M_050219_1,7433 HBL1_DMSO_200M_050219_1,7433,MQGEMDRKC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7434 39.204 137.0 801900.0 25 0 67022.0 -1 CVDGSCRVVGC 11 137 385.4960488798259 1153.4663172396777 3 385.4964172244072 MULTI CID FTMS 0 0 0 7431 610730.875 0.2818551263126634 -1 0.0577774047851562 3 Carbamidomethyl (C) _CVDGSCRVVGC(Carbamidomethyl (C))_ ENSG00000100767|ENST00000644200|PAPLN;nc|ENSG00000100767|O95428-4|PAPLN;nc|ENSG00000100767|O95428-5|PAPLN;nc|ENSG00000100767|O95428-6|PAPLN 19.143941131932102 0.6369309327873195 3 {[DA]|[EG]}[QA][HS]VQ 8 -1 36.845 0.0 0.0 3.1943 0.0 0.0 0.0 314.0784008723613 314.0784008723613 10.611658399188286 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3054621874040891 1.066901560044258 {[DA]|[EG]}[QA][HS]VQ 3.1943 - 645 1 1.986 93515.9 1.0 2316 5116 7431 HBL1_DMSO_200M_050219_1,7434 HBL1_DMSO_200M_050219_1,7434,CVDGSCRVVGC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7435 39.206 95.0 700060.0 25 0 64353.0 + 36540 TAKGGDISV 9 95 424.2295860890082 846.4446192448164 2 424.2299682497978 MULTI CID FTMS 0 0 0 7431 579306.9375 0.3836805505249921 -1 0.0577774047851562 4 Unmodified _TAKGGDISV_ ENSG00000126267|ENST00000649813|COX6B1 32.78568957990786 0.1150597335874693 3 {[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}{I|L}SV 7 5 + 34.142 0.0 0.0 4.0335 4.0335 71.472 0.0 0.0 0.0 1.2839926871780705 6.592116249424507 1.2839926871780705 1.2839926871780705 0 0.8182503180159344 1.3979400086720375 0.3494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}{I|L}SV;[TA]KND{I|L}SV;[VS]Q{[QS]|[NT]}{I|L}SV;{[QN]|[E{I|L}]|[KN]}[TA]D{I|L}SV;[VS][NG][TA]{I|L}SV;[VS][NG]{I|L}[TA]SV;[TA]KGGD{I|L}SV;[VS][AG]{[QS]|[NT]}{I|L}SV;[VS]Q[VG][TA]SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QN]|[E{I|L}]|[KN]}RSV 4.0335;3.8818;3.8174;3.7924;2.8708;2.8188;2.7876;2.7232;2.6712;2.562 -;-;-;-;-;-;+;-;-;- + 415 1 1.986 56280.9 1.0 2317 5116 7431 HBL1_DMSO_200M_050219_1,7435 HBL1_DMSO_200M_050219_1,7435,TAKGGDISV True True TAKGGDISV 39.206163 424.229968249798 11913647.0 7431.0 ENSG00000126267|ENST00000649813|COX6B1 2.407044251759847 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7436 39.21 209.0 428540.0 25 0 155820.0 -1 0 86 436.236042790697 435.2287663240971 1 436.2364074587822 MULTI CID FTMS 0 0 0 7431 259760.515625 0.5313421996727699 -1 0.0577774047851562 5 3 V 1 -1 11.99 0.0 0.0 2.7548 0.0 0.0 318.1492507985096 0.0 318.1492507985096 0.0 2.156818820794939 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.7548 - 24 + 1 1.986 73745.6 1.0 2318 5116 7431 HBL1_DMSO_200M_050219_1,7436 HBL1_DMSO_200M_050219_1,7436, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7437 39.217 380.0 209490.0 25 0 18282.0 + 4903 DGKQQVQVV 9 127 500.775352885321 999.5361528374422 2 500.7750732302666 MULTI CID FTMS 0 0 0 7431 225012.40625 0.0800620273042715 4 -0.425140380859375 6 Unmodified _DGKQQVQVV_ ENSG00000068796|ENST00000407818|KIF2A;ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000068796|O00139-1|KIF2A;nc|ENSG00000068796|O00139-2|KIF2A;nc|ENSG00000068796|O00139-5|KIF2A;nc|ENSG00000068796|O00139|KIF2A;nc|ENSG00000142945|Q99661-2|KIF2C 27.628801355627647 0.1796483985696185 3 {[QV]|[N{I|L}]|[RA]|[KV]}[NS]QVQVV 9 4 + 42.849 0.0 0.0 4.2868 4.2868 74.4 0.0 0.0 0.0 3.2390874094431936 7.464825806156263 3.2390874094431936 2.742275032520148 0 0.6822333069283655 0.744727494896694 0.2742275032520141 1.048455006504028 {[QV]|[N{I|L}]|[RA]|[KV]}[NS]QVQVV;{[QV]|[N{I|L}]|[RA]|[KV]}VDDVQVV;[AG]V[NS]QVQVV;{[QV]|[N{I|L}]|[RA]|[KV]}Q[NS]VQVV;[AG]VQ[NS]VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}[NS][AG]VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}[NS]QV[AG]VV;[AG]VVDDVQVV;[AG]Q[TA]QVQVV;[AG]{I|L}EEGVQVV 4.2868;4.0125;3.9628;3.7113;3.3873;3.3656;3.3656;3.3388;3.2635;3.2015 -;-;-;-;-;-;-;-;-;- 919 1 1.986 63721.4 1.0 2319 5116 7431 HBL1_DMSO_200M_050219_1,7437 HBL1_DMSO_200M_050219_1,7437,DGKQQVQVV False True DGKQQVQVV 39.216951 500.775073230267 17715960.0 7431.0 ENSG00000142945|ENST00000372224|KIF2C;;ENSG00000068796|ENST00000407818|KIF2A;;nc|ENSG00000068796|O00139-5|KIF2A;;nc|ENSG00000142945|Q99661-2|KIF2C;;nc|ENSG00000068796|O00139|KIF2A;;nc|ENSG00000068796|O00139-1|KIF2A;;nc|ENSG00000068796|O00139-2|KIF2A 4.773707548777263 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7438 39.231 799.0 204040.0 25 0 24402.0 -1 0 77 644.7778122788219 2575.0821432488874 4 644.7791015505791 MULTI CID FTMS 0 0 0 7431 155515.609375 0.7091823916400121 2 -0.2012443542480468 7 3 D[WE]K 4 -1 20.362 0.0 0.0 0.79072 0.0 0.0 1731.715706276111 282.11127649478755 2013.8269827708984 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.7742275032520141 D[WE]K 0.79072 - 99 + 1 1.986 124562.1 1.0 2320 5116 7431 HBL1_DMSO_200M_050219_1,7438 HBL1_DMSO_200M_050219_1,7438, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7439 39.245 800.0 261810.0 25 0 23943.0 + 45522 YTTDRVMTV 9 200 551.2659966260583 1100.5174403189164 2 551.2661010622978 MULTI CID FTMS 0 0 0 7431 163611.953125 0.7858140694598861 -1 0.0577774047851562 8 Oxidation (M) _YTTDRVM(Oxidation (M))TV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000523334.1_1_6:114270238-114277280:-|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 67.83816525789305 0.0219346420158844 3 YTT[KG]C(Carbamidomethyl (C))[TA]TV 10 5 + 64.729 0.0 0.0 5.8817 5.8817 75.365 0.0 0.0 0.0 36.53212513775343 3.951328068725559 3.951328068725559 0.0134875797167666 0 0.790918971073312 2.0 1.4916440611282626 0.0 YTT[KG]C(Carbamidomethyl (C))[TA]TV;YTTV[MD][TA]TV;YTT[KG]C(Carbamidomethyl (C))[TA]VT;YTTV[MD][TA]VT;YTVT[MD][TA]TV;YTT[KG]C(Carbamidomethyl (C))[TA]S{I|L};YTTV[MD][TA]S{I|L};YTVA[YR]TNN;YTVT[MD][TA]VT;YTVT[MD][TA]S{I|L} 5.8817;5.8805;5.5227;5.5214;5.5153;5.4674;5.4662;5.1839;5.1563;5.101 -;-;-;-;-;-;-;-;-;- 4510 + 1 1.986 162337.1 0.9800000190734864 2321 5116 7431 HBL1_DMSO_200M_050219_1,7439 HBL1_DMSO_200M_050219_1,7439,YTTDRVMTV True False YTTDRVMTV 39.244603 551.266101062298 2048069.75 7431.0 ENSG00000196591|ENST00000519065|HDAC2;;ENST00000523334.1_1_6:114270238-114277280:-|nuORF;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENSG00000116478|ENST00000373548|HDAC1 5.473759492238362 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7440 39.253 453.0 189580.0 25 0 8251.3 28254 PQVDVHPS 8 140 439.72179987934953 877.4290468254991 2 439.7214538455009 MULTI CID FTMS 0 0 0 7431 122461.1484375 1.0 0 0.0 9 Unmodified _PQVDVHPS_ ENSG00000147124|ENST00000684689|ZNF41;nc|ENSG00000147124|P51814-2|ZNF41;nc|ENSG00000147124|P51814-3|ZNF41;nc|ENSG00000147124|P51814-4|ZNF41;nc|ENSG00000147124|P51814-5|ZNF41;nc|ENSG00000147124|P51814-7|ZNF41;nc|ENSG00000147124|P51814-8|ZNF41;nc|ENSG00000147124|P51814|ZNF41 16.942295170755138 0.6606234159769251 3 [QP]AAA 5 6 23.442 0.0 0.0 2.6717 0.0 0.0 0.0 436.1846102350219 436.1846102350219 4.462724883926654 0.0 0.0 0.0 0 0.5114393726401688 0.0 0.0 0.0 [QP]AAA 2.6717 - 258 + 1 1.986 69139.7 1.0 2322 5116 7431 HBL1_DMSO_200M_050219_1,7440 HBL1_DMSO_200M_050219_1,7440,PQVDVHPS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7441 39.266 800.0 222960.0 25 0 24434.0 + 24732 MPDSDSASSDV 11 190 555.7158574289972 1109.4171619247943 2 555.7167846560478 MULTI CID FTMS 0 0 0 7431 115399.8984375 0.4445644936302669 12 -0.5855827331542969 10 Unmodified _MPDSDSASSDV_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 9.38312468134398 0.8308777417566128 3 MP 2 -1 38.003 0.0 0.0 3.4255 0.0 0.0 0.0 878.3058783165172 878.3058783165172 11.075250724652026 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 MP 3.4255 + + 734 + 1 1.986 139941.7 0.8600000143051147 2323 5116 7431 HBL1_DMSO_200M_050219_1,7441 HBL1_DMSO_200M_050219_1,7441,MPDSDSASSDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7443 39.271 7.1 9987100.0 25 0 1532900.0 + 21596 LPKPPGRGV 9 68 307.52731452707565 919.560114181427 3 307.5272704958916 MULTI CID FTMS 0 0 0 7442 9389299.0 0.6649168628990614 -2 0.1373329162597656 1 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 15.847184025352805 0.4077185912009129 3 {I|L}[KP]PP 5 4 22.218 0.0 0.0 2.4162 0.0 0.0 0.0 384.2004183404906 384.2004183404906 13.266062568876718 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}[KP]PP 2.4162 + + 40 + 1 1.986 61959.8 1.0 2324 5117 7442 HBL1_DMSO_200M_050219_1,7443 HBL1_DMSO_200M_050219_1,7443,LPKPPGRGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7444 39.272 18.0 3340500.0 25 0 402690.0 + 21980 LPPPAAKTV 9 78 447.2760150369352 892.5374771406705 2 447.2764160037041 MULTI CID FTMS 0 0 0 7442 3458352.75 0.5293749802920542 8 -0.4623870849609375 2 Unmodified _LPPPAAKTV_ ENSG00000168894|ENST00000306368|RNF181;ENST00000461845.1_1_2:85822886-85823939:+|nuORF 24.99096001346401 0.2132109383330889 3 {I|L}PP 3 6 50.445 0.0 0.0 5.6519 0.0 0.0 0.0 582.3262378841055 582.3262378841055 40.16772595447483 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PP 5.6519 + + 74 + 1 1.986 53516.1 1.0 2325 5117 7442 HBL1_DMSO_200M_050219_1,7444 HBL1_DMSO_200M_050219_1,7444,LPPPAAKTV False True LPPPAAKTV 39.271882 447.276416003704 1510904528.0 7442.0 ENST00000461845.1_1_2:85822886-85823939:+|nuORF;;ENSG00000168894|ENST00000306368|RNF181 5.749441146850586 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7445 39.273 3.9 17639000.0 25 0 1557700.0 + 32302 RYADRVKEL 9 77 383.8839324556589 1148.6299679671763 3 383.8840209841728 MULTI CID FTMS 0 0 0 7442 14238577.0 0.4871466978143265 -1 0.0795555114746093 3 Unmodified _RYADRVKEL_ ENSG00000142945|ENST00000372224|KIF2C;ENSG00000186638|ENST00000402558|KIF24;nc|ENSG00000142945|Q99661-2|KIF2C;nc|ENSG00000186638|Q5T7B8-2|KIF24;nc|ENSG00000186638|Q5T7B8-4|KIF24 24.881564428377168 0.2146028316269493 3 E{I|L} 2 7 21.454 0.0 0.0 1.8678 0.0 0.0 888.4941270943834 0.0 888.4941270943834 0.0 1.1805408249163918 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + E{I|L} 1.8678 + + 59 1 1.986 60859.3 1.0 2326 5117 7442 HBL1_DMSO_200M_050219_1,7445 HBL1_DMSO_200M_050219_1,7445,RYADRVKEL False True RYADRVKEL 39.273061 383.884020984173 327395072.0 7442.0 ENSG00000142945|ENST00000372224|KIF2C;;nc|ENSG00000186638|Q5T7B8-4|KIF24;;nc|ENSG00000142945|Q99661-2|KIF2C;;nc|ENSG00000186638|Q5T7B8-2|KIF24;;ENSG00000186638|ENST00000402558|KIF24 6.056010405222575 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7446 39.274 48.0 1717800.0 25 0 569460.0 15100 IMNFLSALGAI 11 58 575.322287850721 1148.6300227682418 2 575.3226196169853 MULTI CID FTMS 0 0 0 7442 1302278.0 0.4723539250370761 -1 0.0795555114746093 4 Unmodified _IMNFLSALGAI_ ENSG00000166930|ENST00000300190|MS4A5 8.155526934196011 0.8366696279279818 3 [VG]YW 4 10 36.304 0.0 0.0 3.1606 0.0 0.0 0.0 640.3785032240529 640.3785032240529 15.334529848931297 0.0 0.0 0.0 0 0.7887254899964358 1.6989700043360187 0.0 0.0 [VG]YW 3.1606 - 11 + 1 1.986 68755.1 1.0 2327 5117 7442 HBL1_DMSO_200M_050219_1,7446 HBL1_DMSO_200M_050219_1,7446,IMNFLSALGAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7447 39.277 106.0 783420.0 25 0 99962.0 + 40057 VGGPGKPG 8 99 334.6898056718642 667.3650584105284 2 334.6905395388603 MULTI CID FTMS 0 0 0 7442 587688.625 0.0512293963749248 -2 0.1373329162597656 5 Unmodified _VGGPGKPG_ REV__ENSG00000114650|ENST00000265565|SCAP;REV__nc|ENSG00000114650|Q12770-2|SCAP;REV__nc|ENSG00000114650|Q12770-4|SCAP 0.7936320650641473 0.8195151834710337 3 A{I|L}NHT{I|L} 6 -1 + 56.56 0.0 0.0 8.4752 8.4752 88.696 0.0 0.0 0.0 29.06396317575872 4.357285695614372 4.357285695614372 4.357285695614372 0 0.3807196863200844 2.0 0.6549471895720985 0.3252574989159953 A{I|L}NHT{I|L};A{I|L}N[{I|L}T]H;A{I|L}GGHT{I|L};A{I|L}GG[{I|L}T]H 8.4752;7.8222;6.5762;5.9233 -;-;-;- 130 + 1 1.986 70999.5 1.0 2328 5117 7442 HBL1_DMSO_200M_050219_1,7447 HBL1_DMSO_200M_050219_1,7447,VGGPGKPG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7448 39.28 169.0 482260.0 25 0 59580.0 + 36371 SYQEHVKQL 9 114 566.2936671990061 1130.572781464812 2 566.2942993044853 MULTI CID FTMS 0 0 0 7442 423375.15625 0.3413343730238112 -1 0.0795555114746093 6 Unmodified _SYQEHVKQL_ ENSG00000117226|ENST00000370481|GBP3;ENSG00000162645|ENST00000370466|GBP2;nc|ENSG00000117226|Q9H0R5-4|GBP3 84.73772076367982 0.0163688523900332 3 {[{M(Oxidation (M))|F}C]|[YS]}QEHVKQ{I|L} 9 0 + 65.406 0.0 0.0 5.7853 5.7853 87.045 0.0 0.0 0.0 4.126077557776874 4.126077557776874 4.126077557776874 9.208187539523747 0 2.9802046884880937 0.0 0.6382104921644451 1.3807196863200843 + + {[{M(Oxidation (M))|F}C]|[YS]}QEHVKQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]EHVKQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QEHVK[AG]{I|L};{[{M(Oxidation (M))|F}C]|[YS]}Q{I|L}[HD]KQ{I|L};{I|L}[NG]PQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]EHVK[AG]{I|L};{I|L}[NG]PQK{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q{I|L};{I|L}{[RE]|[WV]}Q{[C(Carbamidomethyl (C))G]|[NC]}KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}Q{I|L}[HD]K[AG]{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]{I|L}[HD]KQ{I|L} 5.7853;4.9708;4.634;4.2347;4.0691;3.8234;3.5319;3.4942;3.4202;3.4202 +;-;-;-;-;-;-;-;-;- + 1715 + 1 1.986 65882.9 1.0 2329 5117 7442 HBL1_DMSO_200M_050219_1,7448 HBL1_DMSO_200M_050219_1,7448,SYQEHVKQL True True SYQEHVKQL 39.279919 566.294299304485 4261160.5 7442.0 ENSG00000117226|ENST00000370481|GBP3;;nc|ENSG00000117226|Q9H0R5-4|GBP3;;ENSG00000162645|ENST00000370466|GBP2 9.382121721903482 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7449 39.292 685.0 259820.0 25 0 8516.7 -1 0 115 725.6592705312628 2173.9559821939883 3 725.9946166872978 MULTI CID FTMS 0 0 0 7442 299899.5625 1.0 0 0.0 7 3 ETVGGD 6 -1 61.93 0.0 0.0 2.8487 0.0 0.0 1597.711948985096 0.0 1597.711948985096 0.0 11.267959391884546 0.0 0.0 0 1.3494850021680094 0.0 1.055462187404089 0.0 ETVGGD 2.8487 - 377 1 1.986 135969.6 1.0 2330 5117 7442 HBL1_DMSO_200M_050219_1,7449 HBL1_DMSO_200M_050219_1,7449, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7450 39.294 102.0 604690.0 25 0 109160.0 + 33253 SFPASSGVSH 10 82 488.2303025289275 974.446052124655 2 488.2309753298759 MULTI CID FTMS 0 0 0 7442 265756.15625 0.1834124967961788 29 -1.4398155212402344 8 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 29.081581746732265 0.3152867722954398 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H 8 5 + 51.119 0.0 0.0 5.246 5.246 81.945 0.0 0.0 0.0 33.68440000316717 6.911225100727592 6.911225100727592 6.136218907515314 0 0.3494850021680094 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PA{[CA]|SS}[VG]SH;{[QN]|[E{I|L}]|[KN]}[VG]{[CA]|SS}APDT;{[QN]|[E{I|L}]|[KN]}{[VA]|[{I|L}G]}[KC]PDT 5.246;4.6163;1.5479;1.0058 -;+;-;- + 140 + 1 1.986 55415.1 1.0 2331 5117 7442 HBL1_DMSO_200M_050219_1,7450 HBL1_DMSO_200M_050219_1,7450,SFPASSGVSH False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7451 39.306 698.0 267950.0 25 0 9034.4 + 13701 HQISQQTQL 9 181 541.78405442787 1081.55355592254 2 541.7830078005791 MULTI CID FTMS 0 0 0 7442 259772.4375 1.0 0 0.0 9 Unmodified _HQISQQTQL_ ENSG00000135870|ENST00000367696|RC3H1;nc|ENSG00000135870|Q5TC82-2|RC3H1 79.59630418116434 0.0176145593575188 3 [AG]{I|L}HSQQTQ{I|L} 10 3 + 97.036 0.0 0.0 8.9719 8.9719 87.398 0.0 0.0 0.0 14.774193280918569 15.026975159433531 14.774193280918569 3.0102999566398125 0 0.5941876774005248 2.0 2.2134679910804405 0.4247425010840047 [AG]{I|L}HSQQTQ{I|L};[AG]H{I|L}SQQTQ{I|L};[AG]{I|L}HSQQT[AG]{I|L};[AG]{I|L}HS[AG]QTQ{I|L};[AG]{I|L}HSQ[AG]TQ{I|L};[AG]{I|L}SHQQTQ{I|L};[AG]H{I|L}SQQT[AG]{I|L};[AG]H{I|L}S[AG]QTQ{I|L};[AG]H{I|L}SQ[AG]TQ{I|L};[AG]TVHQQTQ{I|L} 8.9719;8.6936;8.1245;8.1245;8.1245;7.9287;7.8462;7.8462;7.8462;7.6952 -;-;-;-;-;-;-;-;-;- 9253 1 1.986 144484.7 1.0 2332 5117 7442 HBL1_DMSO_200M_050219_1,7451 HBL1_DMSO_200M_050219_1,7451,HQISQQTQL True True HQISQQTQL 39.306161 541.783007800579 963167.6875 7442.0 nc|ENSG00000135870|Q5TC82-2|RC3H1;;ENSG00000135870|ENST00000367696|RC3H1 5.602736314137776 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7452 39.31 193.0 555750.0 25 0 73164.0 + + 39668 IDQDARDL 8 144 473.2351357506165 944.4557185680328 2 473.2351257205009 MULTI CID FTMS 0 0 0 7442 235176.484375 1.0 0 0.0 10 Unmodified _VEEDQARV_ ENSG00000182718|ENST00000451270|ANXA2;nc|ENSG00000182718|P07355-2|ANXA2 24.67388899826682 0.525179942228231 3 {I|L}DQ{[DA]|[EG]}REV 8 -1 + 54.197 0.0 0.0 5.7385 5.7385 85.836 0.0 0.0 0.0 29.25296175278838 8.893017025063095 8.893017025063095 8.893017025063095 0 0.8807196863200843 1.5228787452803376 0.8807196863200843 0.3252574989159953 {I|L}DQ{[DA]|[EG]}REV;{I|L}DQ{[DA]|[EG]}RD{I|L};{I|L}D[AG]{[DA]|[EG]}REV;{I|L}D{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[QP]{I|L}V;{I|L}D[AG]{[DA]|[EG]}RD{I|L};{I|L}D{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP]EV;{I|L}D{[{M(Oxidation (M))|F}D]|MM}[HS]{I|L}V;{I|L}D{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[QP]V{I|L};{I|L}D{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]Y;{I|L}D{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP]D{I|L} 5.7385;4.7969;4.7578;4.0341;3.8162;3.5952;3.2684;3.0925;2.8254;2.6536 -;-;-;-;-;-;-;-;-;- 415 + 1 1.986 84856.6 1.0 2333 5117 7442 HBL1_DMSO_200M_050219_1,7452 HBL1_DMSO_200M_050219_1,7452,VEEDQARV False False IDQDARDL 39.309869 473.235125720501 3118814.25 7442.0 ENSG00000182718|ENST00000451270|ANXA2;;nc|ENSG00000182718|P07355-2|ANXA2 0.6565729777018229 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7453 39.315 265.0 313570.0 25 0 33752.0 + + 43703 YYITGESK 8 117 481.235639056501 960.456725179802 2 481.2361328005791 MULTI CID FTMS 0 0 0 7442 209838.078125 0.9625098376826264 -1 0.0795555114746093 11 Unmodified _YAYGILDF_ nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENSG00000096384|ENST00000371646|HSP90AB1 14.581692164780916 0.6954967302934248 3 YATY[{I|L}P]S{M(Oxidation (M))|F} 8 -1 + 53.207 0.0 0.0 5.5397 5.5397 77.431 0.0 0.0 0.0 39.22731096978272 4.266548441099012 4.266548441099012 1.8585109634483743 0 0.4247425010840047 2.0 0.4247425010840047 0.0 YATY[{I|L}P]S{M(Oxidation (M))|F};YAT[SG][KT]S{M(Oxidation (M))|F};YATQW[RH];YATY{[HG]|PP}H{I|L};YA[{M(Oxidation (M))|F}V][WY]{I|L};YATQW{[HG]|PP}V;Y[C(Carbamidomethyl (C))R][KT]S{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[VG]P[SG]TDT;{[TV]|[{I|L}S]}[YV]YTDT;[{I|L}A]{[CP]|[EA]}P[SG]TDT 5.5397;5.3462;4.256;3.9739;3.6968;3.6164;1.7932;1.0174;0.69208;0.58462 -;-;-;-;-;-;-;-;-;- 191 + 1 1.986 65980.4 1.0 2334 5117 7442 HBL1_DMSO_200M_050219_1,7453 HBL1_DMSO_200M_050219_1,7453,YAYGILDF False False YYITGESK 39.314759 481.236132800579 565284.6875 7442.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;nc|ENSG00000205940|Q58FF8|HSP90AB2P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 3.607341210047404 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7454 39.324 539.0 380810.0 25 0 31883.0 + 44823 YPNPYSKHV 9 169 368.8547388674639 1103.5423872025915 3 368.8547546267509 MULTI CID FTMS 0 0 0 7442 172294.140625 0.5256366706587785 -5 0.5453262329101562 12 Unmodified _YPNPYSKHV_ ENSG00000169230|ENST00000303204|PRELID1;ENST00000511309.5_1_5:176730986-176733129:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1 5.731851221503515 0.7145881442174411 3 {I|L} 1 9 10.0 0.0 0.0 0.90617 0.0 0.0 972.4472619357932 0.0 972.4472619357932 0.0 -7.703037561203843 -7.703037561203843 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.90617 - 112 + 1 1.986 166178.2 1.0 2335 5117 7442 HBL1_DMSO_200M_050219_1,7454 HBL1_DMSO_200M_050219_1,7454,YPNPYSKHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7455 39.332 348.0 242150.0 25 0 13901.0 + 3448 CELEGLVRE 9 138 524.2604150289292 1046.5062771246585 2 524.2604858279228 MULTI CID FTMS 0 0 0 7442 185686.125 0.3340576737809896 4 -0.4045753479003906 13 Unmodified _CELEGLVRE_ REV__ENSG00000124198|ENST00000371917|ARFGEF2 18.373094154950223 0.3393451798331396 3 [EC]{I|L}V 4 -1 24.86 0.0 0.0 2.3755 0.0 0.0 0.0 599.2784993749113 599.2784993749113 9.375102217736728 0.0 0.0 0.0 0 1.0 0.0 0.2887254899964357 0.0 [EC]{I|L}V 2.3755 - 325 1 1.986 70764.1 1.0 2336 5117 7442 HBL1_DMSO_200M_050219_1,7455 HBL1_DMSO_200M_050219_1,7455,CELEGLVRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7456 39.346 800.0 164770.0 25 0 11855.0 + + 20779 HFIEKAHTL 9 152 548.2977608902828 0 548.3040649294853 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _LLVEPCAHLT_ nc|ENSG00000105726|Q9HD20-2|ATP13A1;ENSG00000105726|ENST00000357324|ATP13A1;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;ENST00000469641.5_1_19:19762333-19763700:-|nuORF 36.12702656103203 0.1519005573994188 3 THC(Carbamidomethyl (C))PA{I|L}{M(Oxidation (M))|F} 7 -1 27.316 0.0 0.0 2.4956 0.0 0.0 131.08685852687796 134.03623377017814 265.12309229705613 0.0 0.0 0.0 0.0 0 1.9291746928241125 0.0 0.0 0.0 THC(Carbamidomethyl (C))PA{I|L}{M(Oxidation (M))|F} 2.4956 - 654 + 1 1.986 102481.2 0.8600000143051147 2337 5117 7442 HBL1_DMSO_200M_050219_1,7456 HBL1_DMSO_200M_050219_1,7456,LLVEPCAHLT False False HFIEKAHTL 39.345525 548.304064929485 73073480.0 7442.0 nc|ENSG00000105726|Q9HD20-2|ATP13A1;;ENSG00000105726|ENST00000357324|ATP13A1;;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;;ENST00000469641.5_1_19:19762333-19763700:-|nuORF 5.879160722096761 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7457 39.359 800.0 202310.0 25 0 15100.0 + 14044 IAKQEDVSV 9 179 494.76961513561713 0 494.7692748904228 PEAK CID FTMS 0 0 0 7442 131973.484375 0.7788386812408596 -1 0.0795555114746093 15 Unmodified _IAKQEDVSV_ ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1 60.07390631473393 0.0167981024283326 3 V{I|L}AKD 5 6 26.925 0.0 0.0 2.7265 0.0 0.0 204.11319159760305 254.07859216861564 458.1917837662187 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.6109243748081782 V{I|L}AKD 2.7265 - 966 + 1 1.986 124654.6 0.8299999833106995 2338 5117 7442 HBL1_DMSO_200M_050219_1,7457 HBL1_DMSO_200M_050219_1,7457,IAKQEDVSV True True IAKQEDVSV 39.35934 494.769274890423 1955153.125 7442.0 nc|ENSG00000111530|Q86VP6-2|CAND1;;ENSG00000111530|ENST00000545606|CAND1 3.1948435306549072 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7458 39.374 800.0 348510.0 25 0 21833.0 8751 EVQYFFKI 8 210 537.2889247798207 1072.5632966264411 2 537.2904540896416 MULTI CID FTMS 0 0 0 7442 141974.484375 1.0 0 0.0 16 Unmodified _EVQYFFKI_ ENSG00000143156|ENST00000367811|NME7;nc|ENSG00000143156|Q9Y5B8-2|NME7 17.11289562659939 0.6581031263288403 3 [{M(Oxidation (M))|F}V]TAT 5 6 36.168 0.0 0.0 3.3721 0.0 0.0 0.0 550.3036280075538 550.3036280075538 3.639205086568019 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.9604093769761876 0.0 [{M(Oxidation (M))|F}V]TAT 3.3721 - 3039 1 1.986 210630.9 0.8299999833106995 2339 5117 7442 HBL1_DMSO_200M_050219_1,7458 HBL1_DMSO_200M_050219_1,7458,EVQYFFKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7459 39.388 800.0 61575.0 25 0 6425.3 8663 EVFYIHFNVH 10 83 652.8220092654228 0 652.8220092654228 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _EVFYIHFNVH_ ENSG00000138646|ENST00000264350|HERC5;ENST00000502913.1_1_4:89394186-89425581:+|nuORF;ENST00000510223.5_1_4:89394995-89425581:+|nuORF 6.2057823575117 0.3961065659209838 3 E 1 9 8.8515 0.0 0.0 0.67899 0.0 0.0 652.3137440173706 519.2403658502561 1171.5541098676267 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + E 0.67899 + + 7 + 1 1.986 43873.3 0.8500000238418579 2340 5117 7442 HBL1_DMSO_200M_050219_1,7459 HBL1_DMSO_200M_050219_1,7459,EVFYIHFNVH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7461 39.392 13.0 4125200.0 25 0 587190.0 + 24263 MAPPPPRSV 9 57 476.2574249361268 950.5002969390536 2 476.2576476931572 MULTI CID FTMS 0 0 0 7460 4078819.75 0.3850799654498426 5 -0.3165245056152344 1 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 12.240655878213236 0.5053430591993562 3 {[DS]|[MA]|[CV]|TT}PPP 5 4 41.254 0.0 0.0 4.3403 0.0 0.0 0.0 454.2440584772094 454.2440584772094 34.26477176880759 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + {[DS]|[MA]|[CV]|TT}PPP 4.3403 + + 29 + 1 1.975 48673.1 1.0 2341 5118 7460 HBL1_DMSO_200M_050219_1,7461 HBL1_DMSO_200M_050219_1,7461,MAPPPPRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7462 39.394 69.0 628860.0 25 0 93152.0 + 26135 NPSMPQRTV 9 80 515.2607408698069 1028.5069288064135 2 515.2610351443291 MULTI CID FTMS 0 0 0 7460 480870.40625 0.0609689043572437 3 -0.2828865051269531 2 Unmodified _NPSMPQRTV_ ENSG00000197943|ENST00000564138|PLCG2 21.59015148037692 0.2564810811560323 3 NPSMPQR{[TV]|[{I|L}S]} 9 0 + 57.683 0.0 0.0 5.6084 5.6084 86.441 0.0 0.0 0.0 43.4800735867496 0.8232913608582848 0.8232913608582848 9.208187539523747 0 0.5 1.6989700043360187 0.0 0.0 + + NPSMPQR{[TV]|[{I|L}S]};NPSMP[AG]R{[TV]|[{I|L}S]};NP[WE]QR{[TV]|[{I|L}S]};NP[WE][AG]R{[TV]|[{I|L}S]};N[WE]PQR{[TV]|[{I|L}S]};N[WE]P[AG]R{[TV]|[{I|L}S]} 5.6084;4.7131;3.4482;2.5476;1.3101;0.40959 +;-;-;-;-;- + 86 + 1 1.975 41606.3 1.0 2342 5118 7460 HBL1_DMSO_200M_050219_1,7462 HBL1_DMSO_200M_050219_1,7462,NPSMPQRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7463 39.395 26.0 2564100.0 25 0 246660.0 34301 SLRKDGPLDM 10 104 377.8646212100121 1130.5720342302363 3 377.8645812869072 MULTI CID FTMS 0 0 0 7460 1915082.0 1.0 0 0.0 3 Unmodified _SLRKDGPLDM_ ENSG00000169519|ENST00000407364|METTL15;nc|ENSG00000169519|A6NJ78-2|METTL15;nc|ENSG00000169519|A6NJ78-4|METTL15 14.838274106304384 0.5985701837916485 3 DM 2 8 16.427 0.0 0.0 1.453 0.0 0.0 866.4936783726176 0.0 866.4936783726176 0.0 4.832881222565252 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 + DM 1.453 + + 256 + 1 1.975 55879.0 1.0 2343 5118 7460 HBL1_DMSO_200M_050219_1,7463 HBL1_DMSO_200M_050219_1,7463,SLRKDGPLDM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7464 39.397 60.0 983550.0 25 0 104630.0 + 29751 QPQAQALT 8 97 428.7296942419984 855.4448355507967 2 428.7297851443291 MULTI CID FTMS 0 0 0 7460 931834.8125 0.6694278726586412 1 -0.1302680969238281 4 Unmodified _QPQAQALT_ REV__ENST00000473212.1_1_21:46927018-46932309:+|nuORF 23.1484247019978 0.5573009939494978 3 {[QD]|[EN]|[WG]|[KD]|[RS]}T[HA]AT{I|L} 8 -1 {[QD]|[EN]|[WG]|[KD]|[RS]}T[HA]A + + 21.827 -5.1927 -0.83309 2.5516 2.5516 49.443 0.0 0.0 0.0 0.0 12.874992588081591 0.0 0.0 0 0.4247425010840047 0.0 0.2887254899964357 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}T[HA]AT{I|L} 2.5516 - 87 + 1 1.975 49363.9 1.0 2344 5118 7460 HBL1_DMSO_200M_050219_1,7464 HBL1_DMSO_200M_050219_1,7464,QPQAQALT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7465 39.399 98.0 766560.0 25 0 138090.0 + 39398 VAKVEPAV 8 100 406.7475332362884 811.4805135393768 2 406.7474243044853 MULTI CID FTMS 0 0 0 7460 883380.3125 1.0 0 0.0 5 Unmodified _VAKVEPAV_ ENSG00000125844|ENST00000377813|RRBP1;nc|ENSG00000125844|Q9P2E9-3|RRBP1 36.04419817259434 0.3004715606373109 3 {[VA]|[{I|L}G]}KEVPAV 8 2 + 45.958 0.0 0.0 5.6635 5.6635 80.079 0.0 0.0 0.0 4.771212547196626 10.172203223519531 4.771212547196626 3.188330747580686 0 1.1677353201839438 1.5228787452803376 0.2396518287104437 0.0 {[VA]|[{I|L}G]}KEVPAV;{[VA]|[{I|L}G]}KVEPAV;{NN|[MP]|[D{I|L}]|[EV]}KAVPAV;{[VA]|[{I|L}G]}KEPVAV;{[VA]|[{I|L}G]}[VS]AVPAV;{NN|[MP]|[D{I|L}]|[EV]}KAPVAV;{[VA]|[{I|L}G]}KPEVAV;{NN|[MP]|[D{I|L}]|[EV]}KPAVAV;{NN|[MP]|[D{I|L}]|[EV]}PKAVAV;{NN|[MP]|[D{I|L}]|[EV]}KPVAAV 5.6635;5.2706;5.0755;4.6764;4.2487;4.0884;4.0665;3.7931;3.6955;3.5761 -;+;-;-;-;-;-;-;-;- + 411 1 1.975 63141.1 1.0 2345 5118 7460 HBL1_DMSO_200M_050219_1,7465 HBL1_DMSO_200M_050219_1,7465,VAKVEPAV False True VAKVEPAV 39.398839 406.747424304485 4326310.5 7460.0 ENSG00000125844|ENST00000377813|RRBP1;;nc|ENSG00000125844|Q9P2E9-3|RRBP1 2.2620639204978943 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7466 39.401 77.0 807480.0 25 0 145140.0 -1 KMSHCNDF 8 64 527.7071625856017 1053.3997722380034 2 527.7076904177666 MULTI CID FTMS 0 0 0 7460 793850.75 1.0 0 0.0 6 Carbamidomethyl (C),Oxidation (M) _KM(Oxidation (M))SHC(Carbamidomethyl (C))NDF_ ENST00000319653.13_1_1:240637457-240637514:+|nuORF 18.1463463914782 0.6428359029697936 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{M(Oxidation (M))|F}[HN]Q{M(Oxidation (M))|F} 8 -1 + 37.101 0.0 0.0 3.522 3.522 80.526 0.0 0.0 0.0 0.6348625752110593 27.36880000633434 0.6348625752110593 9.262137858390808 0 1.0 0.0 0.0 0.4247425010840047 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{M(Oxidation (M))|F}[HN]Q{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{M(Oxidation (M))|F}[HN][AG]{M(Oxidation (M))|F} 3.522;2.6427 -;- 49 1 1.975 54649.7 1.0 2346 5118 7460 HBL1_DMSO_200M_050219_1,7466 HBL1_DMSO_200M_050219_1,7466,KMSHCNDF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7467 39.41 521.0 329540.0 25 0 16209.0 + -1 AGGEQCECAY 10 164 544.1951057232806 1086.375658513361 2 544.1963378787041 MULTI CID FTMS 0 0 0 7460 380305.90625 0.0522385270873435 -3 0.2590217590332031 7 Carbamidomethyl (C) _AGGEQC(Carbamidomethyl (C))ECAY_ REV__ENSG00000135622|ENST00000357877|SEMA4F;REV__nc|ENSG00000135622|O95754-2|SEMA4F 19.256988751693697 0.5244284437930726 3 MSS[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V 6 -1 25.556 0.0 0.0 2.3524 0.0 0.0 357.1009271077323 0.0 357.1009271077323 0.0 0.0071778657979848 0.0 0.0 0 0.0 0.0 1.0941876774005248 0.0 MSS[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V 2.3524 - 1057 + 1 1.975 131442.3 1.0 2347 5118 7460 HBL1_DMSO_200M_050219_1,7467 HBL1_DMSO_200M_050219_1,7467,AGGEQCECAY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7468 39.42 608.0 205280.0 25 0 31183.0 + 13186 HGFSPRTV 8 141 450.73782570917626 899.4610984851525 2 450.7380248904228 MULTI CID FTMS 0 0 0 7460 332850.90625 0.3447748808592262 2 -0.2238960266113281 8 Unmodified _HGFSPRTV_ ENST00000494664.5_1_3:119217469-119217535:+|nuORF 41.8396318013385 0.2035142800366642 3 HGVR{[{M(Oxidation (M))|F}D]|MM}AV 8 5 + 64.659 0.0 0.0 7.1886 7.1886 80.961 0.0 0.0 0.0 13.053396606206888 7.095690636129888 7.095690636129888 0.9948500216800936 0 1.142159058960253 1.3010299956639813 0.6861818737241735 0.0 HGVR{[{M(Oxidation (M))|F}D]|MM}AV;HG{M(Oxidation (M))|F}S[RP]TV;HGVR{[{M(Oxidation (M))|F}D]|MM}G{I|L};HG{M(Oxidation (M))|F}S[RP]S{I|L};HG{M(Oxidation (M))|F}S[RV][TP];HGVR{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP];HGVR{NN|[MP]|[D{I|L}]|[EV]}{[CT]|[{M(Oxidation (M))|F}G]};HGKK{[QC]|[C(Carbamidomethyl (C))A]}TV;HVGR{[{M(Oxidation (M))|F}D]|MM}AV;VHGR{[{M(Oxidation (M))|F}D]|MM}AV 7.1886;7.078;6.1207;6.0101;5.7968;5.3833;5.0844;4.6239;4.5452;4.5315 -;+;-;-;-;-;-;-;-;- + 310 + 1 1.975 97909.6 1.0 2348 5118 7460 HBL1_DMSO_200M_050219_1,7468 HBL1_DMSO_200M_050219_1,7468,HGFSPRTV False True HGFSPRTV 39.420427 450.738024890423 15889595.0 7460.0 ENST00000494664.5_1_3:119217469-119217535:+|nuORF 7.472246805826823 2.0 True 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7469 39.433 720.0 210930.0 25 0 12218.0 + 41884 VQAEAGGMHTV 11 198 550.2640640466142 0 550.2639648318291 PEAK CID FTMS 0 0 0 7460 190670.578125 1.0 0 0.0 9 Unmodified _VQAEAGGMHTV_ ENSG00000180198|ENST00000683442|RCC1;nc|ENSG00000180198|P18754-2|RCC1 67.83816525789305 0.0031993434030141 3 AEA 3 8 33.416 0.0 0.0 3.042 0.0 0.0 227.1254210990988 597.2471409991672 824.3725620982659 0.0 0.0 0.0 0.0 0 1.2614393726401687 0.0 0.7614393726401688 0.0 + AEA 3.042 + + 717 + 1 1.975 118297.3 1.0 2349 5118 7460 HBL1_DMSO_200M_050219_1,7469 HBL1_DMSO_200M_050219_1,7469,VQAEAGGMHTV True True VQAEAGGMHTV 39.432919 550.263964831829 624645.75 7460.0 ENSG00000180198|ENST00000683442|RCC1;;nc|ENSG00000180198|P18754-2|RCC1 7.443020343780518 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7470 39.447 796.0 95978.0 25 0 3316.4 -1 0 87 643.0973202963947 3210.4502191489737 5 643.3012573122978 MULTI CID FTMS 0 0 0 7460 178247.546875 1.0 0 0.0 10 3 EG{[SA]|[TG]}G 5 -1 17.747 0.0 0.0 0.5528 0.0 0.0 1490.685643626506 1315.5674248857322 2806.2530685122383 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 EG{[SA]|[TG]}G 0.5528 - 138 + 1 1.975 64960.0 1.0 2350 5118 7460 HBL1_DMSO_200M_050219_1,7470 HBL1_DMSO_200M_050219_1,7470, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7471 39.461 800.0 475200.0 25 0 46525.0 + 41692 VPSAKVGG 8 283 357.7106792759361 0 357.7108032107353 PEAK CID FTMS 0 0 0 7460 166788.5 1.0 0 0.0 11 Unmodified _VPSAKVGG_ REV__ENSG00000167548|ENST00000301067|KMT2D;REV__KMT2D|p.G1946Rfs*11|1|0.2|ENSG00000167548|chr12:49042593-49042594|-/G|frameshift_variant;REV__KMT2D|p.S4034Qfs*15|1|0.63|ENSG00000167548|chr12:49032602-49032605|AAGA/-|frameshift_variant;REV__nc|ENSG00000167548|O14686-3|KMT2D 2.889219685676258 0.5898224805723975 3 T{I|L}RE 4 -1 14.8 0.0 0.0 2.0745 0.0 0.0 129.0445142141785 82.06696497134999 211.11147918552848 0.0 0.0 0.0 0.0 0 0.1039171939081173 0.0 0.2614393726401688 0.0 T{I|L}RE 2.0745 - 50 + 1 1.975 296390.4 0.8100000023841858 2351 5118 7460 HBL1_DMSO_200M_050219_1,7471 HBL1_DMSO_200M_050219_1,7471,VPSAKVGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7472 39.474 796.0 101670.0 25 0 3566.6 -1 0 95 628.8887612827801 3139.4074240809005 5 629.0827514529228 MULTI CID FTMS 0 0 0 7460 154390.65625 0.0982076301101253 8 -0.3461723327636719 12 3 W{I|L}P 3 -1 13.188 0.0 0.0 0.42007 0.0 0.0 1419.6453899853066 1320.5619157749222 2740.207305760229 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W{I|L}P 0.42007 - 414 + 1 1.975 66123.8 1.0 2352 5118 7460 HBL1_DMSO_200M_050219_1,7472 HBL1_DMSO_200M_050219_1,7472, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7473 39.49 800.0 306220.0 25 0 23477.0 + 13231 HHPDYNNEL 9 191 569.7491078049561 1137.483662676712 2 569.7503539919853 MULTI CID FTMS 0 0 0 7460 156365.515625 0.0249387085590612 4 -0.2904396057128906 13 Unmodified _HHPDYNNEL_ ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11 43.85829265575387 0.0542763391141878 3 HH[DP]YNNE{I|L} 9 0 + 62.642 0.0 0.0 5.5071 5.5071 86.138 0.0 0.0 0.0 14.771212547196626 14.09256854528806 14.09256854528806 9.208187539523747 0 0.0 1.3979400086720375 0.0 1.1549471895720984 + + HH[DP]YNNE{I|L};HH[DP]YNGGE{I|L};HH[DP]YGGNE{I|L};[DP]HHYNNE{I|L};[DP]YNHHNE{I|L};[DP]YHHNNE{I|L};[DP]YNNHHE{I|L};[DP]YNHNHE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EYNNE{I|L};[DP]YHNHNE{I|L} 5.5071;4.6975;4.4952;4.2085;4.174;4.1181;3.9323;3.7023;3.6975;3.6447 +;-;-;-;-;-;-;-;-;- + 7112 1 1.975 181708.8 0.9300000071525574 2353 5118 7460 HBL1_DMSO_200M_050219_1,7473 HBL1_DMSO_200M_050219_1,7473,HHPDYNNEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7474 39.503 800.0 175400.0 25 0 10483.0 -1 0 115 625.3195556219717 624.3122791553717 1 625.3212768435478 MULTI CID FTMS 0 0 0 7460 148691.453125 0.1583637782209863 3 -0.2828865051269531 14 3 V{I|L}GSSY 6 -1 + 86.251 0.0 0.0 13.815 13.815 98.375 0.0 0.0 0.0 65.37790966639926 13.187587626244124 13.187587626244124 21.988349744983537 0 1.721848749616356 2.0 1.4698565171985374 0.0 V{I|L}GSSY;[{I|L}V]GSSY;V{I|L}{[CA]|SS}GY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VSY;[SG]{I|L}VSY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}SY;[VS]AVSY;{[{M(Oxidation (M))|F}C]|[YS]}SG{I|L}V;[SG]V{I|L}SY;[VS]G{I|L}SY 13.815;10.293;8.1728;5.38;4.5885;4.5761;4.489;3.8058;3.7846;3.685 -;-;-;-;-;-;-;-;-;- 343 + 1 1.975 106384.6 0.8899999856948853 2354 5118 7460 HBL1_DMSO_200M_050219_1,7474 HBL1_DMSO_200M_050219_1,7474, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7475 39.518 800.0 56145.0 25 0 4057.6 -1 0 64 804.1202470046566 3212.451882152226 4 804.1211425662041 MULTI CID FTMS 0 0 0 7460 39326.53125 0.40383007515202 1 -0.1302680969238281 15 3 V 1 -1 6.9897 0.0 0.0 0.21758 0.0 0.0 1051.4624672065336 2058.8949638460017 3110.3574310525355 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.21758 - 87 + 1 1.975 40104.9 0.7300000190734863 2355 5118 7460 HBL1_DMSO_200M_050219_1,7475 HBL1_DMSO_200M_050219_1,7475, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7477 39.523 9.7 7723100.0 25 0 1758600.0 + 5042 DGYEQAARV 9 79 504.7401092137372 1007.4656654942744 2 505.2511169314384 MULTI CID FTMS 0 0 0 7476 6376395.5 0.0218938372835569 -6 0.662078857421875 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 78.14939416004806 0.0179651292570206 3 [YG]DEQAARV 9 2 [YG]D + + 50.098 22.465 6.7037 4.9726 4.9726 55.528 0.0 0.0 0.0 0.0 27.63300376378838 0.0 0.0 0 0.7302046884880937 0.0 0.4247425010840047 1.0189301784845295 [YG]DEQAARV 4.9726 - 170 + 1 1.954 61418.5 1.0 2356 5119 7476 HBL1_DMSO_200M_050219_1,7477 HBL1_DMSO_200M_050219_1,7477,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7478 39.524 19.0 2054400.0 25 0 135490.0 -1 DAEMTTRMV 9 71 535.2358917733172 1068.4572306134344 2 535.2365600466728 MULTI CID FTMS 0 0 0 7476 1978772.375 0.483223895398686 1 -0.0936279296875 2 Oxidation (M) _DAEM(Oxidation (M))TTRMV_ ENSG00000205220|ENST00000358514|PSMB10 34.93206674587334 0.1032771302489716 3 {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{[ET]|[MV]} 9 -1 + 68.606 0.0 0.0 6.421 6.421 92.49 0.0 0.0 0.0 55.41833743429045 5.253312076568903 5.253312076568903 26.46591250700361 0 0.8494850021680094 2.0 0.4247425010840047 0.0 {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{[ET]|[MV]};{[DA]|[EG]}E[WY]R{[ET]|[MV]};[{I|L}P]{[HG]|PP}TT{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H];{[{M(Oxidation (M))|F}C]|[YS]}[DP]TTR{[ET]|[MV]};{[DA]|[EG]}E[KC]{NN|[MP]|[D{I|L}]|[EV]}Y{I|L};{[DA]|[EG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[PS]R{[ET]|[MV]};[{M(Oxidation (M))|F}T]RT[PS]E[EC];[{I|L}P]{[HG]|PP}TT[DP][EC];{[{M(Oxidation (M))|F}C]|[YS]}ET[PS]R{[ET]|[MV]};[{I|L}P]{[HG]|PP}T[PS]E[EC] 6.421;3.944;3.763;2.608;2.4296;2.3274;2.2105;2.1515;1.9288;1.754 +;-;-;-;-;-;-;-;-;- + 199 + 1 1.954 40147.8 1.0 2357 5119 7476 HBL1_DMSO_200M_050219_1,7478 HBL1_DMSO_200M_050219_1,7478,DAEMTTRMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7479 39.525 5.0 12355000.0 25 0 2948500.0 + 5043 DGYEQAARV 9 78 504.7401092137372 1007.4656654942744 2 504.7409240603447 MULTI CID FTMS 0 0 0 7476 11872347.0 0.0213347972304677 -6 0.662078857421875 3 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 45.69961567697781 0.0497987121815769 3 [DG]YEQAARV 9 0 + 72.145 0.0 0.0 7.161 7.161 91.193 0.0 0.0 0.0 59.67084689121528 7.403405327429411 7.403405327429411 9.208187539523747 0 1.079689690656103 1.2218487496163564 0.4247425010840047 0.4247425010840047 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YEV[NG]RV;[DG]YV[DN]ARV;[DG]YVE[NG]RV 7.161;6.2471;5.2999;4.6484;4.3496 +;-;-;-;- + 118 + 1 1.954 50593.1 1.0 2358 5119 7476 HBL1_DMSO_200M_050219_1,7479 HBL1_DMSO_200M_050219_1,7479,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7480 39.526 7.9 6120700.0 25 0 983160.0 + 11221 GEPREGEI 8 64 443.7163037799485 885.418054626697 2 443.7168151736259 MULTI CID FTMS 0 0 0 7476 7861960.0 0.5722674798506158 -2 0.2519569396972656 4 Unmodified _GEPREGEI_ REV__ENST00000557806.5_1_14:24641555-24641950:+|nuORF 34.40172386719151 0.3279500639400574 3 {[DA]|[EG]}[RP]ADE{I|L} 8 -1 + 65.45 0.0 0.0 7.392 7.392 63.167 0.0 0.0 0.0 29.704999916446795 33.13100339696028 29.704999916446795 0.0 0 0.8807196863200843 2.0 0.0 0.4247425010840047 {[DA]|[EG]}[RP]ADE{I|L};{[DA]|[EG]}[RP]EGE{I|L};{[DA]|[EG]}[RP]AED{I|L};{[DA]|[EG]}[RP]EAD{I|L};{[DA]|[EG]}[RP]E{I|L}{[DA]|[EG]};[RP]{[DA]|[EG]}EGE{I|L};[RP]{[DA]|[EG]}ADE{I|L};[RP]{[DA]|[EG]}EAD{I|L};[RP]{[DA]|[EG]}AED{I|L};[RP]{[DA]|[EG]}E{I|L}{[DA]|[EG]} 7.392;7.392;7.052;7.052;4.5043;4.0296;4.0296;3.6897;3.6897;1.142 -;+;-;-;-;-;-;-;-;- + 193 1 1.954 43674.5 1.0 2359 5119 7476 HBL1_DMSO_200M_050219_1,7480 HBL1_DMSO_200M_050219_1,7480,GEPREGEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7481 39.527 33.0 1913700.0 25 0 281160.0 + 21594 LPKPPGRGV 9 57 460.78694340186655 919.5593338705332 2 460.7872192263603 MULTI CID FTMS 0 0 0 7476 2035598.125 0.9396084853334324 1 -0.0936279296875 5 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 34.10243960390752 0.1078313939113124 3 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}P 7 5 62.836 0.0 0.0 6.8332 0.0 0.0 0.0 125.07250391177968 125.07250391177968 55.845850974183335 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3807196863200844 0.3494850021680094 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}P 6.8332 - 73 + 1 1.954 53683.5 1.0 2360 5119 7476 HBL1_DMSO_200M_050219_1,7481 HBL1_DMSO_200M_050219_1,7481,LPKPPGRGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7482 39.529 36.0 1266900.0 25 0 150070.0 + 24940 MPPPPPQGV 9 80 468.2362839438316 934.4580149544632 2 468.2363769412041 MULTI CID FTMS 0 0 0 7476 1324691.0 0.4132587806973739 7 -0.2159042358398437 6 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 42.96799951952854 0.0591636306142405 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 5 4 18.952 0.0 0.0 2.0282 0.0 0.0 0.0 396.1876360066546 396.1876360066546 -3.728721920568248 0.0 -3.728721920568248 0.0 0 0.3494850021680094 0.0 0.5 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 2.0282 + + 101 1 1.954 43229.3 1.0 2361 5119 7476 HBL1_DMSO_200M_050219_1,7482 HBL1_DMSO_200M_050219_1,7482,MPPPPPQGV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7483 39.53 45.0 1018800.0 25 0 130750.0 + 4854 DGAPPPNQI 9 83 454.72708443755056 907.4396159419013 2 454.7270385622978 MULTI CID FTMS 0 0 0 7476 1215206.125 0.682370816721791 1 -0.0936279296875 7 Unmodified _DGAPPPNQI_ ENSG00000184007|ENST00000647444|PTP4A2;ENST00000532001.6_1_1:32374455-32378590:-|nuORF;nc|ENSG00000184007|Q12974-3|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2 63.960520009940105 0.0238892913700936 3 [DG]APP 5 4 45.432 0.0 0.0 5.0066 0.0 0.0 0.0 467.2251438562168 467.2251438562168 32.33288122256525 0.0 0.0 0.0 0 1.424742501084005 1.3979400086720375 0.3252574989159953 0.0 + [DG]APP 5.0066 + + 208 1 1.954 42689.8 1.0 2362 5119 7476 HBL1_DMSO_200M_050219_1,7483 HBL1_DMSO_200M_050219_1,7483,DGAPPPNQI True True DGAPPPNQI 39.52978 454.727038562298 118504544.0 7476.0 ENSG00000184007|ENST00000647444|PTP4A2;;ENST00000532001.6_1_1:32374455-32378590:-|nuORF;;nc|ENSG00000184007|Q12974-4|PTP4A2;;nc|ENSG00000184007|Q12974-3|PTP4A2 5.684999465942383 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7484 39.531 54.0 1092900.0 25 0 149420.0 + 15694 IQRLETMK 8 73 509.7884080578552 1017.5622631825104 2 509.7891418337822 MULTI CID FTMS 0 0 0 7476 1155969.125 0.2886419781292928 2 -0.152618408203125 8 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 3 {[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]TMK 9 -1 + 46.144 0.0 0.0 4.5348 4.5348 76.646 0.0 0.0 0.0 0.4524904595219681 19.149152774571903 0.4524904595219681 3.4948500216800937 0 1.924742501084005 0.0 0.7742275032520141 0.0 {[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]TMK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[VA]|[{I|L}G]}[{I|L}P]TMK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[VA]|[{I|L}G]}[{I|L}P]G{M(Oxidation (M))|F}R;{[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]G{M(Oxidation (M))|F}[VG] 4.5348;4.1913;1.8084;1.2469 -;-;-;- 159 1 1.954 51017.4 1.0 2363 5119 7476 HBL1_DMSO_200M_050219_1,7484 HBL1_DMSO_200M_050219_1,7484,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7485 39.534 148.0 579890.0 25 0 41855.0 + 10655 FVQLCPYKGQG 11 92 620.3132969374445 1238.612040941689 2 620.3127319216728 MULTI CID FTMS 0 0 0 7476 567187.875 0.6166238835293041 -14 1.3991470336914062 9 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 3 PPPPPPPQN 9 -1 82.979 0.0 0.0 6.6994 0.0 0.0 299.1516050059452 0.0 299.1516050059452 0.0 59.60200035004867 0.0 0.0 0 2.774227503252014 0.0 0.0 1.646591250700361 PPPPPPPQN 6.6994 - 3333 + 1 1.954 70672.3 1.0 2364 5119 7476 HBL1_DMSO_200M_050219_1,7485 HBL1_DMSO_200M_050219_1,7485,FVQLCPYKGQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7486 39.545 606.0 358310.0 25 0 50150.0 -1 0 58 1179.8257557002155 3536.4554377008467 3 1180.495166003704 MULTI CID FTMS 0 0 0 7476 557266.75 0.2906102971775796 2 -0.152618408203125 10 3 YG 2 -1 8.5835 0.0 0.0 0.24271 0.0 0.0 1781.625189753384 1531.7377975060058 3313.36298725939 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.24271 - 182 + 1 1.954 157218.6 1.0 2365 5119 7476 HBL1_DMSO_200M_050219_1,7486 HBL1_DMSO_200M_050219_1,7486, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7487 39.548 189.0 400640.0 25 0 36722.0 + -1 EGMYTGHGRM 10 110 577.7404647521475 1153.466376571095 2 577.7411987185478 MULTI CID FTMS 0 0 0 7476 549454.5 0.1781726869782514 2 -0.152618408203125 11 Oxidation (M) _EGMYTGHGRM(Oxidation (M))_ REV__ENSG00000130713|ENST00000372358|EXOSC2;REV__ENST00000430138.6_1_9:133569178-133570981:+|nuORF;REV__ENST00000463488.1_1_9:133569202-133574940:+|nuORF;REV__ENST00000491115.6_1_9:133569178-133574746:+|nuORF;REV__nc|ENSG00000130713|Q13868-2|EXOSC2;REV__nc|ENSG00000130713|Q13868-3|EXOSC2 22.736283301280096 0.4578556481593033 3 {[DA]|[EG]}MQVVR 7 -1 69.028 0.0 0.0 5.9844 0.0 0.0 0.0 351.0406588190063 351.0406588190063 50.62160747676117 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.0 0.7302046884880937 {[DA]|[EG]}MQVVR 5.9844 - 225 + 1 1.954 61538.0 1.0 2366 5119 7476 HBL1_DMSO_200M_050219_1,7487 HBL1_DMSO_200M_050219_1,7487,EGMYTGHGRM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7488 39.55 72.0 915210.0 25 0 89642.0 + 35760 SVIKELRKA 9 88 348.5573418803318 1042.6501962411955 3 348.5569335818291 MULTI CID FTMS 0 0 0 7476 441552.125 0.1168678263138866 4 -0.1862564086914062 12 Unmodified _SVIKELRKA_ ENSG00000204899|ENST00000377818|MZT1 17.11289562659939 0.3734572693229295 3 [VS]{I|L}KE 5 4 49.833 0.0 0.0 4.7794 0.0 0.0 0.0 483.30562193998026 483.30562193998026 38.57382135759625 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3807196863200844 + [VS]{I|L}KE 4.7794 + + 63 + 1 1.954 58878.6 1.0 2367 5119 7476 HBL1_DMSO_200M_050219_1,7488 HBL1_DMSO_200M_050219_1,7488,SVIKELRKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7489 39.555 292.0 324890.0 25 0 21945.0 + 37266 TINSNISV 8 127 424.2295860890082 846.4446192448164 2 424.2301818728447 MULTI CID FTMS 0 0 0 7476 279151.53125 0.184884741156573 2 -0.152618408203125 13 Unmodified _TINSNISV_ REV__ENSG00000091009|ENST00000265271|RBM27 28.486842064014134 0.4448922141344407 3 {[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}{I|L}SV 7 -1 + 26.98 0.0 0.0 3.1874 3.1874 76.266 0.0 0.0 0.0 3.479684878265772 7.784919386223663 3.479684878265772 6.423231713452175 0 0.5242275032520141 1.3010299956639813 0.3252574989159953 0.0 {[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}{I|L}SV;[VS]Q{[QS]|[NT]}{I|L}SV;[VS][NG][TA]{I|L}SV;[{I|L}T][WE]{I|L}SV;[TA]{[QG]|[NA]}[TA]{I|L}SV;[VS][AG]{[QS]|[NT]}{I|L}SV;[VS]QK[TA]DV;[VS]QK{[CP]|[EA]}SV;[TA]AA{[QS]|[NT]}{I|L}SV;[VS][NG]{I|L}[TA]SV 3.1874;2.4286;1.9853;1.6714;1.441;1.3343;0.87427;0.81398;0.79;0.77528 -;-;-;-;-;-;-;-;-;- 340 1 1.954 78135.7 1.0 2368 5119 7476 HBL1_DMSO_200M_050219_1,7489 HBL1_DMSO_200M_050219_1,7489,TINSNISV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7490 39.569 800.0 440690.0 25 0 58162.0 -1 0 134 904.915641577991 1807.8167302227816 2 905.4202148318292 MULTI CID FTMS 0 0 0 7476 275693.875 0.0786089793579126 -9 0.9873771667480468 14 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TSVAKVY 9 -1 35.249 0.0 0.0 1.9498 0.0 0.0 0.0 799.2459043773318 799.2459043773318 -3.726459768747105 0.0 -3.726459768747105 0.0 0 0.0 0.0 1.6989700043360187 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TSVAKVY 1.9498 - 1399 1 1.954 235184.8 0.9800000190734864 2369 5119 7476 HBL1_DMSO_200M_050219_1,7490 HBL1_DMSO_200M_050219_1,7490, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7491 39.583 800.0 305590.0 25 0 37431.0 + 19069 LDQSAYCF 8 210 473.7009703962048 945.3873878592096 2 473.7007934451103 MULTI CID FTMS 0 0 0 7476 147341.515625 1.0 0 0.0 15 Unmodified _LDQSAYCF_ REV__ENSG00000188419|ENST00000357749|CHM 21.74664581756881 0.5868176546531598 3 {I|L}DQ 3 -1 46.242 0.0 0.0 4.8914 0.0 0.0 0.0 586.1984346979124 586.1984346979124 26.77825934852436 0.0 0.0 0.0 0 0.3494850021680094 1.0 0.0 0.805462187404089 {I|L}DQ 4.8914 + + 513 + 1 1.954 189176.8 0.9200000166893004 2370 5119 7476 HBL1_DMSO_200M_050219_1,7491 HBL1_DMSO_200M_050219_1,7491,LDQSAYCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7492 39.597 800.0 447790.0 25 0 34053.0 + 4000 DALRQTASV 9 235 480.7585518328315 959.502550732463 2 481.2593871951103 MULTI CID FTMS 0 0 0 7476 153953.109375 0.0268110380486138 -8 0.8890419006347656 16 Unmodified _DALRQTASV_ ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT 83.42873516780209 0.0166860047644719 3 {[DA]|[EG]}{I|L}RQTASV 9 0 + 65.464 0.0 0.0 6.8227 6.8227 84.832 0.0 0.0 0.0 3.991910595244924 9.50343581971874 3.991910595244924 3.991910595244924 0 1.337180496500464 1.5228787452803376 1.0994850021680094 0.3807196863200844 + + {[DA]|[EG]}{I|L}RQTASV;[VS]AA{[QV]|[N{I|L}]|[RA]|[KV]}EASV;{[SA]|[TG]}VA{[QV]|[N{I|L}]|[RA]|[KV]}EASV;[VS]AA[Q{I|L}]WSV;{[DA]|[EG]}{I|L}R[AG]TASV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[Q{I|L}]DASV;[VS]AA[Q{I|L}]SWV;{[SA]|[TG]}VA[Q{I|L}]WSV;[VS]AA{[QV]|[N{I|L}]|[RA]|[KV]}TADV;{NN|[MP]|[D{I|L}]|[EV]}ARQTASV 6.8227;6.4067;5.9882;5.974;5.863;5.8323;5.6236;5.5555;5.2848;5.268 +;-;-;-;-;-;-;-;-;- + 8359 1 1.954 269427.3 0.9300000071525574 2371 5119 7476 HBL1_DMSO_200M_050219_1,7492 HBL1_DMSO_200M_050219_1,7492,DALRQTASV True True DALRQTASV 39.59693 481.25938719511 159173520.0 7476.0 ENST00000409258.2_1_2:86386442-86398424:-|nuORF;;nc|ENSG00000132305|Q16891-3|IMMT;;nc|ENSG00000132305|Q16891-4|IMMT;;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;;ENSG00000132305|ENST00000410111|IMMT;;nc|ENSG00000132305|Q16891-2|IMMT 6.166821320851644 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7493 39.612 800.0 254430.0 25 0 18743.0 + 3570 DAADMTKV 8 198 425.701863694698 0 425.7021362185478 PEAK CID FTMS 0 0 0 7476 134383.96875 1.0 0 0.0 17 Unmodified _DAADMTKV_ ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF 47.74868867922204 0.112875525981096 3 ADM 3 5 22.109 0.0 0.0 2.603 0.0 0.0 186.0619044458489 343.1994799117648 529.2613843576137 0.0 0.0 0.0 0.0 0 0.8921590589602533 0.0 0.0 0.0 + ADM 2.603 + + 52 + 1 1.954 157823.2 0.7599999904632568 2372 5119 7476 HBL1_DMSO_200M_050219_1,7493 HBL1_DMSO_200M_050219_1,7493,DAADMTKV True True DAADMTKV 39.612209 425.702136218548 2203027.25 7476.0 ENSG00000170606|ENST00000304858|HSPA4;;ENST00000514825.1_1_5:132437411-132440125:+|nuORF 5.69412358601888 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7495 39.616 5.1 10322000.0 25 0 1625800.0 + 21597 LPKPPGRGV 9 51 307.52731452707565 919.560114181427 3 307.5272094607353 MULTI CID FTMS 0 0 0 7494 11535560.0 0.8169074567743445 1 -0.058990478515625 1 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 10.073929032068715 0.563993802247229 3 {I|L}PKPP 5 4 37.959 0.0 0.0 4.1279 0.0 0.0 0.0 384.1999605768188 384.1999605768188 32.47425010840047 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}PKPP 4.1279 + + 28 + 1 1.929 49740.6 1.0 2373 5120 7494 HBL1_DMSO_200M_050219_1,7495 HBL1_DMSO_200M_050219_1,7495,LPKPPGRGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7496 39.617 8.9 5092000.0 25 0 922590.0 + 1104 AGPGKAAP 8 61 334.6898056718642 667.3650584105284 2 334.6897155642509 MULTI CID FTMS 0 0 0 7494 8697757.0 0.7581920458742539 1 -0.058990478515625 2 Unmodified _AGPGKAAP_ REV__ENSG00000164853|ENST00000316333|UNCX 0.6903765706972694 0.8201419426409876 3 A{I|L}NHT{I|L} 6 -1 + 71.058 0.0 0.0 10.648 10.648 96.869 0.0 0.0 0.0 19.19193764011748 15.938910355093968 15.938910355093968 12.672655519383078 0 0.805462187404089 2.0 0.8494850021680094 0.3252574989159953 A{I|L}NHT{I|L};A{I|L}GGHT{I|L} 10.648;8.7487 -;- 126 + 1 1.929 43065.8 1.0 2374 5120 7494 HBL1_DMSO_200M_050219_1,7496 HBL1_DMSO_200M_050219_1,7496,AGPGKAAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7497 39.619 16.0 3894900.0 25 0 347270.0 + 32303 RYADRVKEL 9 75 383.8839324556589 1148.6299679671763 3 383.8835021853447 MULTI CID FTMS 0 0 0 7494 4116429.5 0.140836056700784 2 -0.0665435791015625 3 Unmodified _RYADRVKEL_ ENSG00000142945|ENST00000372224|KIF2C;ENSG00000186638|ENST00000402558|KIF24;nc|ENSG00000142945|Q99661-2|KIF2C;nc|ENSG00000186638|Q5T7B8-2|KIF24;nc|ENSG00000186638|Q5T7B8-4|KIF24 19.62595529434964 0.305431704817896 3 E{I|L} 2 7 25.573 0.0 0.0 2.2264 0.0 0.0 888.4940655838445 0.0 888.4940655838445 0.0 18.58349385648225 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 + E{I|L} 2.2264 + + 46 1 1.929 57363.1 1.0 2375 5120 7494 HBL1_DMSO_200M_050219_1,7497 HBL1_DMSO_200M_050219_1,7497,RYADRVKEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7498 39.62 25.0 2602600.0 25 0 278120.0 15344 IPLTLHTV 8 98 447.2760150369352 892.5374771406705 2 447.2757751345634 MULTI CID FTMS 0 0 0 7494 2836326.5 0.4341605364112527 11 -0.2240562438964843 4 Unmodified _IPLTLHTV_ ENSG00000039600|ENST00000265007|SOX30;nc|ENSG00000039600|O94993-2|SOX30 24.67388899826682 0.525179942228231 3 {I|L}PP 3 6 50.445 0.0 0.0 5.6519 0.0 0.0 0.0 582.3277071588499 582.3277071588499 41.17595277211517 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PP 5.6519 - 115 + 1 1.929 56684.7 1.0 2376 5120 7494 HBL1_DMSO_200M_050219_1,7498 HBL1_DMSO_200M_050219_1,7498,IPLTLHTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7499 39.621 25.0 2106200.0 25 0 280160.0 + 21499 LPHWPLPHA 9 71 534.2943387729905 1066.574124612781 2 534.2936889529228 MULTI CID FTMS 0 0 0 7494 1498542.75 0.5627582931954662 -11 1.1742935180664062 5 Unmodified _LPHWPLPHA_ REV__ENST00000266000.10_2_6:33288751-33288820:-|nuORF 14.581692164780916 0.4419739649577144 3 {I|L}PPEP 5 -1 63.443 0.0 0.0 5.9483 0.0 0.0 0.0 530.2789400690061 530.2789400690061 42.528200427267535 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {I|L}PPEP 5.9483 - 136 + 1 1.929 52020.3 1.0 2377 5120 7494 HBL1_DMSO_200M_050219_1,7499 HBL1_DMSO_200M_050219_1,7499,LPHWPLPHA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7500 39.622 53.0 901550.0 25 0 126460.0 + 14039 IAKIQQSTV 9 96 494.2949467573425 986.575340581485 2 494.2952148318291 MULTI CID FTMS 0 0 0 7494 1130282.5 0.4282462781959765 -4 0.425140380859375 6 Unmodified _IAKIQQSTV_ ENSG00000105851|ENST00000496166|PIK3CG 36.12702656103203 0.0967173616627612 3 {I|L}A 2 7 38.756 0.0 0.0 3.9283 0.0 0.0 0.0 799.4336641900999 799.4336641900999 9.881747095347537 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 + {I|L}A 3.9283 + + 170 + 1 1.929 38950.4 1.0 2378 5120 7494 HBL1_DMSO_200M_050219_1,7500 HBL1_DMSO_200M_050219_1,7500,IAKIQQSTV True True IAKIQQSTV 39.622365 494.295214831829 11317101.0 7494.0 ENSG00000105851|ENST00000496166|PIK3CG 3.880039691925049 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7501 39.625 122.0 860250.0 25 0 73494.0 + -1 VDECGHGSSV 10 83 523.714212323282 1045.413871713364 2 523.7144042849541 MULTI CID FTMS 0 0 0 7494 924184.0625 0.3227024729310389 -9 0.9826698303222656 7 Carbamidomethyl (C) _VDEC(Carbamidomethyl (C))GHGSSV_ REV__ENSG00000142449|ENST00000600128|FBN3 14.838274106304384 0.5985701837916485 3 DV 2 -1 21.075 0.0 0.0 2.0159 0.0 0.0 813.3062569926271 0.0 813.3062569926271 0.0 1.6108923744478254 0.0 0.0 0 0.2887254899964357 0.0 0.3494850021680094 0.0 DV 2.0159 - 57 1 1.929 85549.8 1.0 2379 5120 7494 HBL1_DMSO_200M_050219_1,7501 HBL1_DMSO_200M_050219_1,7501,VDECGHGSSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7502 39.628 137.0 385640.0 25 0 68178.0 + -1 GDYECREIKD 10 62 642.7779334616218 1283.5413139900436 2 642.7774536013603 MULTI CID FTMS 0 0 0 7494 650172.125 0.2797755094707984 -6 0.6329116821289062 8 Carbamidomethyl (C) _GDYEC(Carbamidomethyl (C))REIKD_ REV__ENSG00000123384|ENST00000243077|LRP1 6.2057823575117 0.6979311171683138 3 [{M(Oxidation (M))|F}E][DG]YEQAARV 11 -1 + 47.963 0.0 0.0 3.7368 3.7368 79.74 0.0 0.0 0.0 31.197887582883933 10.695316896499529 10.695316896499529 9.128498242810998 0 0.0 0.0 0.4247425010840047 0.3494850021680094 [{M(Oxidation (M))|F}E][DG]YEQAARV;[{M(Oxidation (M))|F}E][DG]YE[AG]AARV 3.7368;3.0256 -;- 110 + 1 1.929 43527.2 1.0 2380 5120 7494 HBL1_DMSO_200M_050219_1,7502 HBL1_DMSO_200M_050219_1,7502,GDYECREIKD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7503 39.635 385.0 571770.0 25 0 77290.0 + 41548 VPPDTRNVV 9 134 498.7770266984527 995.5395004637054 2 498.7779113650322 MULTI CID FTMS 0 0 0 7494 541421.625 0.3745938609777121 -11 1.1742935180664062 9 Unmodified _VPPDTRNVV_ ENSG00000275835|ENST00000615383|TUBGCP5;nc|ENSG00000275835|Q96RT8-2|TUBGCP5 20.41453444215458 0.284085796332423 3 VPPD 4 5 58.928 0.0 0.0 5.9192 0.0 0.0 0.0 584.3172423293589 584.3172423293589 44.7062251842808 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.2742275032520141 0.0 + VPPD 5.9192 + + 445 + 1 1.929 168162.8 1.0 2381 5120 7494 HBL1_DMSO_200M_050219_1,7503 HBL1_DMSO_200M_050219_1,7503,VPPDTRNVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7504 39.638 181.0 721500.0 25 0 54869.0 -1 VTDCDYMAL 9 136 349.478410234086 1045.4134013024582 3 349.4782592654228 MULTI CID FTMS 0 0 0 7494 478497.1875 0.1235916506569122 -9 0.9826698303222656 10 Oxidation (M) _VTDCDYM(Oxidation (M))AL_ ENSG00000179598|ENST00000321560|PLD6 8.745405648335112 0.6093864874670651 3 VD 2 -1 22.565 0.0 0.0 2.1585 0.0 0.0 0.0 828.2959637140658 828.2959637140658 -2.1279570645274504 0.0 -2.1279570645274504 0.0 0 0.1595680409956017 0.0 0.0 0.0 VD 2.1585 - 89 + 1 1.929 111570.1 1.0 2382 5120 7494 HBL1_DMSO_200M_050219_1,7504 HBL1_DMSO_200M_050219_1,7504,VTDCDYMAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7505 39.646 426.0 481960.0 25 0 31251.0 + -1 EVFTCSDCT 9 186 531.1969979671973 1060.3794430011944 2 531.6979858279228 MULTI CID FTMS 0 0 0 7494 464409.875 0.4954986362474245 -5 0.4829177856445312 11 Carbamidomethyl (C) _EVFTCSDC(Carbamidomethyl (C))T_ REV__ENSG00000176542|ENST00000316407|USF3 4.3292370932331545 0.7635526921153418 3 QAARV 5 -1 16.481 0.0 0.0 1.5542 0.0 0.0 517.0656135107632 0.0 517.0656135107632 0.0 4.336966405463191 0.0 0.0 0 0.0 0.0 0.0 0.6382104921644451 QAARV 1.5542 - 585 + 1 1.929 157294.3 1.0 2383 5120 7494 HBL1_DMSO_200M_050219_1,7505 HBL1_DMSO_200M_050219_1,7505,EVFTCSDCT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7506 39.657 673.0 769720.0 25 0 150860.0 -1 DGNMHVRMG 9 290 344.8157661796739 1031.4254691392218 3 344.8148071169853 MULTI CID FTMS 0 0 0 7494 278958.125 0.2420005038096402 -4 0.425140380859375 12 Oxidation (M) _DGNM(Oxidation (M))HVRMG_ ENSG00000131437|ENST00000403231|KIF3A;nc|ENSG00000131437|Q9Y496|KIF3A 16.149105407346934 0.3995459350917656 3 DGYQE 5 -1 49.122 0.0 0.0 4.7626 0.0 0.0 0.0 436.1911409967407 436.1911409967407 31.69108897819799 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 1.0 0.3494850021680094 DGYQE 4.7626 - 718 + 1 1.929 405476.4 1.0 2384 5120 7494 HBL1_DMSO_200M_050219_1,7506 HBL1_DMSO_200M_050219_1,7506,DGNMHVRMG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7507 39.671 800.0 200830.0 25 0 32943.0 -1 0 64 1151.7885281821707 3452.3437551467123 3 1152.124072253704 MULTI CID FTMS 0 0 0 7494 237831.3125 0.4439686467424321 -6 0.6329116821289062 13 3 YG 2 -1 9.464 0.0 0.0 0.27413 0.0 0.0 1781.6081116914372 1447.6298311822875 3229.237942873725 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.27413 - 49 + 1 1.929 121148.8 0.9700000286102296 2385 5120 7494 HBL1_DMSO_200M_050219_1,7507 HBL1_DMSO_200M_050219_1,7507, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7509 39.675 12.0 4164300.0 25 0 434930.0 + -1 SMQCSQESM 9 85 544.1951057232806 1086.375658513361 2 544.1958495974541 MULTI CID FTMS 0 0 0 7508 7280180.5 1.0 0 0.0 1 Carbamidomethyl (C) _SMQC(Carbamidomethyl (C))SQESM_ REV__ENSG00000171115|ENST00000307271|GIMAP8 10.073929032068715 0.563993802247229 3 MSS[R{M(Oxidation (M))|F}]C 6 -1 22.203 0.0 0.0 2.0438 0.0 0.0 357.101440839336 0.0 357.101440839336 0.0 2.7731093702044483 0.0 0.0 0 0.0 0.0 1.25 0.2614393726401688 MSS[R{M(Oxidation (M))|F}]C 2.0438 - 277 + 1 1.929 44929.4 1.0 2386 5121 7508 HBL1_DMSO_200M_050219_1,7509 HBL1_DMSO_200M_050219_1,7509,SMQCSQESM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7510 39.676 21.0 3058600.0 25 0 438240.0 + 24264 MAPPPPRSV 9 57 476.2574249361268 950.5002969390536 2 476.2573119997978 MULTI CID FTMS 0 0 0 7508 3229817.25 0.3049259323213059 8 -0.117889404296875 2 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 3 {[DS]|[MA]|[CV]|TT}PPP 5 4 46.198 0.0 0.0 4.8604 0.0 0.0 0.0 454.2429903619751 454.2429903619751 40.713337517843655 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 + {[DS]|[MA]|[CV]|TT}PPP 4.8604 + + 39 + 1 1.929 55153.2 1.0 2387 5121 7508 HBL1_DMSO_200M_050219_1,7510 HBL1_DMSO_200M_050219_1,7510,MAPPPPRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7511 39.678 24.0 2238800.0 25 0 472210.0 13703 HQKANLTV 8 68 455.7582007711707 909.5018486091416 2 455.7583801150322 MULTI CID FTMS 0 0 0 7508 3345229.25 0.605748960428562 -4 0.4045753479003906 3 Unmodified _HQKANLTV_ ENSG00000189042|ENST00000682579|ZNF567;nc|ENSG00000189042|Q8N184-1|ZNF567;nc|ENSG00000189042|Q8N184-2|ZNF567 20.453626601364224 0.6087503291685402 3 RTV 3 6 28.43 0.0 0.0 3.1259 0.0 0.0 535.2814944605071 0.0 535.2814944605071 0.0 19.477437731477423 0.0 0.0 0 0.8494850021680094 0.0 0.3252574989159953 0.0 RTV 3.1259 - 44 + 1 1.929 52422.0 1.0 2388 5121 7508 HBL1_DMSO_200M_050219_1,7511 HBL1_DMSO_200M_050219_1,7511,HQKANLTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7512 39.679 41.0 1807800.0 25 0 101910.0 -1 DYGQTSKMS 9 92 516.7183080520143 1031.4220631708286 2 516.7192260622978 MULTI CID FTMS 0 0 0 7508 926710.875 0.6463399823840073 -6 0.5419082641601562 4 Oxidation (M) _DYGQTSKM(Oxidation (M))S_ ENSG00000157554|ENST00000288319|ERG;ENST00000468474.5_1_21:39772286-39947633:-|nuORF;ENST00000492833.5_1_21:39767491-39817511:-|nuORF;nc|ENSG00000157554|P11308-1|ERG;nc|ENSG00000157554|P11308-3|ERG;nc|ENSG00000157554|P11308-5|ERG;nc|ENSG00000157554|P11308-6|ERG 6.723162845929126 0.6799819581413107 3 QAARV 5 -1 34.45 0.0 0.0 3.3401 0.0 0.0 488.1085998913348 0.0 488.1085998913348 0.0 23.1246936830415 0.0 0.0 0 1.4489700043360187 0.0 0.0 0.4247425010840047 QAARV 3.3401 - 114 + 1 1.929 61575.7 1.0 2389 5121 7508 HBL1_DMSO_200M_050219_1,7512 HBL1_DMSO_200M_050219_1,7512,DYGQTSKMS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7514 39.685 231.0 629590.0 25 0 137170.0 -1 EKIHFCRFEL 10 86 689.850055930362 1377.685558927524 2 689.8497192263603 MULTI CID FTMS 0 0 0 7513 1132760.875 0.5267587014912325 -5 0.4121284484863281 1 Carbamidomethyl (C) _EKIHFC(Carbamidomethyl (C))RFEL_ ENST00000510976.1_1_4:103963500-103966121:-|nuORF 8.155526934196011 0.6889124077178598 3 DGYEQAA[RV] 9 -1 60.556 0.0 0.0 4.3955 0.0 0.0 370.21695780438034 0.0 370.21695780438034 0.0 41.00350135195385 0.0 0.0 0 0.5 0.0 0.7614393726401688 1.110924374808178 DGYEQAA[RV] 4.3955 - 317 + 1 1.929 112628.6 1.0 2390 5122 7513 HBL1_DMSO_200M_050219_1,7514 HBL1_DMSO_200M_050219_1,7514,EKIHFCRFEL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7515 39.691 311.0 597790.0 25 0 41593.0 + 31486 RPYEKGRLI 9 169 377.892298444496 1130.655065933688 3 377.8923828005791 MULTI CID FTMS 0 0 0 7513 530126.4375 0.9505370205821748 1 -0.0260848999023437 2 Unmodified _RPYEKGRLI_ ENSG00000086061|ENST00000330899|DNAJA1;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;nc|ENSG00000086061|P31689-2|DNAJA1 22.774965066869 0.2414061210083823 3 [VG]PYEK{I|L}{[NV]|[RG]}{I|L} 10 4 + 47.388 0.0 0.0 4.1912 4.1912 77.833 0.0 0.0 0.0 30.29915098710911 1.8320812581187056 1.8320812581187056 5.317821571549494 0 1.6655852772434645 1.6989700043360187 0.4247425010840047 0.0 [VG]PYEK{I|L}{[NV]|[RG]}{I|L};{I|L}[R{M(Oxidation (M))|F}]EK{I|L}{[NV]|[RG]}{I|L};[VG]PYE{I|L}K{[NV]|[RG]}{I|L};[VG]PYEK{I|L}[RV]A;{I|L}[R{M(Oxidation (M))|F}]E{I|L}K{[NV]|[RG]}{I|L};{I|L}[R{M(Oxidation (M))|F}]EK{I|L}[RV]A;[VG]PYE{I|L}K[RV]A;{I|L}[R{M(Oxidation (M))|F}]E{I|L}K[RV]A 4.1912;3.7209;3.3925;3.2671;2.9222;2.7967;2.4683;1.998 -;-;-;-;-;-;-;- 280 + 1 1.929 151548.5 1.0 2391 5122 7513 HBL1_DMSO_200M_050219_1,7515 HBL1_DMSO_200M_050219_1,7515,RPYEKGRLI False True RPYEKGRLI 39.690615 377.892382800579 11271790.0 7513.0 nc|ENSG00000086061|P31689-2|DNAJA1;;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;;ENSG00000086061|ENST00000330899|DNAJA1 6.413051764170329 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7516 39.692 62.0 2023200.0 25 0 160440.0 28034 PNQHCEFR 8 117 515.7304567560803 1029.4463605789606 2 515.7304565310478 MULTI CID FTMS 0 0 0 7513 1464462.625 0.7545059794965688 -7 0.5494613647460938 3 Unmodified _PNQHCEFR_ ENSG00000130940|ENST00000377022|CASZ1 13.50788311687929 0.7113601687236069 3 [NP]Q 3 5 26.483 0.0 0.0 2.5726 0.0 0.0 0.0 687.2716834151512 687.2716834151512 4.930796342878594 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.3807196863200844 + [NP]Q 2.5726 + + 430 1 1.929 99918.9 1.0 2392 5122 7513 HBL1_DMSO_200M_050219_1,7516 HBL1_DMSO_200M_050219_1,7516,PNQHCEFR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7517 39.698 336.0 458630.0 25 0 75351.0 -1 EYTEHCWAMH 10 103 661.75145762212 1321.48836231104 2 661.7508422732353 MULTI CID FTMS 0 0 0 7513 358649.75 0.8518544964288561 -6 0.4916839599609375 4 Oxidation (M) _EYTEHCWAM(Oxidation (M))H_ ENSG00000154263|ENST00000690296|ABCA10;nc|ENSG00000154263|Q8WWZ4-2|ABCA10;nc|ENSG00000154263|Q8WWZ4-4|ABCA10;nc|ENSG00000154263|Q8WWZ4-5|ABCA10 3.5964929083625545 0.7100006075494749 3 EQAA[RV] 6 -1 35.545 0.0 0.0 2.6898 0.0 0.0 649.1315651992551 0.0 649.1315651992551 0.0 20.839868525585462 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.6643943297944485 EQAA[RV] 2.6898 - 139 + 1 1.929 114388.0 1.0 2393 5122 7513 HBL1_DMSO_200M_050219_1,7517 HBL1_DMSO_200M_050219_1,7517,EYTEHCWAMH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7518 39.705 370.0 276640.0 25 0 33945.0 + -1 QQCQCMDSW 9 118 572.6978637576103 0 572.6978637576103 PEAK CID FTMS 0 0 0 -1 0 5 Oxidation (M) _QQCQCM(Oxidation (M))DSW_ REV__ENST00000318266.9_1_20:2936298-2945537:+|nuORF;REV__ENST00000380393.7_1_20:2903898-2945537:+|nuORF;REV__ENST00000431048.5_1_20:2854325-2945537:+|nuORF 2.059750862983233 0.3444685223463734 3 D 1 -1 11.237 0.0 0.0 0.9828 0.0 0.0 97.96603014181105 927.3672837013808 1025.333313843192 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D 0.9828 + + 19 + 1 1.929 80818.1 1.0 2394 5122 7513 HBL1_DMSO_200M_050219_1,7518 HBL1_DMSO_200M_050219_1,7518,QQCQCMDSW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7520 39.714 244.0 450080.0 25 0 35183.0 + -1 YGDFLCEESDC 11 104 669.2347151943588 1336.4548774555176 2 669.7346069216728 MULTI CID FTMS 0 0 0 7519 667757.25 1.0 0 0.0 1 Carbamidomethyl (C) _YGDFLCEESDC(Carbamidomethyl (C))_ REV__ENSG00000204301|ENST00000375023|NOTCH4 5.296884461304476 0.8501568894076437 3 EQAARV 6 -1 31.503 0.0 0.0 2.3572 0.0 0.0 664.0972459643956 0.0 664.0972459643956 0.0 14.557137941944012 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 EQAARV 2.3572 - 198 + 1 1.808 81974.8 1.0 2395 5123 7519 HBL1_DMSO_200M_050219_1,7520 HBL1_DMSO_200M_050219_1,7520,YGDFLCEESDC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7521 39.72 341.0 405730.0 25 0 30256.0 -1 HGWCCCMLRWC 11 132 792.7944762751215 0 792.7950317263603 PEAK CID FTMS 0 0 0 7519 323342.0 1.0 0 0.0 2 3 Carbamidomethyl (C),Oxidation (M) _HGWC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))M(Oxidation (M))LRWC_ ENST00000513761.5_1_4:170625285-170628061:+|nuORF 0.3070304955306653 0.4761840153648598 3 TEQAA 5 -1 30.618 0.0 0.0 1.9334 0.0 0.0 810.1877551852054 270.1581209772094 1080.345876162415 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 TEQAA 1.9334 - 246 + 1 1.808 99506.7 1.0 2396 5123 7519 HBL1_DMSO_200M_050219_1,7521 HBL1_DMSO_200M_050219_1,7521,HGWCCCMLRWC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7522 39.726 309.0 196610.0 25 0 8320.3 + 5930 DQAQVEMEYF 10 114 630.2687209192056 0 630.2695800662041 PEAK CID FTMS 0 0 0 7519 304264.6875 0.6529541294370789 -3 0.0926284790039062 3 Unmodified _DQAQVEMEYF_ REV__ENSG00000253537|ENST00000518325|PCDHGA7;REV__nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7 22.736283301280096 0.276231959287006 3 ANEQAEDH 8 -1 49.577 0.0 0.0 3.9393 0.0 0.0 165.07386654368617 196.07387720279533 361.1477437464815 0.0 0.0 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.5 ANEQAEDH 3.9393 - 1571 + 1 1.808 49223.2 1.0 2397 5123 7519 HBL1_DMSO_200M_050219_1,7522 HBL1_DMSO_200M_050219_1,7522,DQAQVEMEYF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7525 39.735 40.0 2135100.0 25 0 76016.0 + 33386 SGNRNRLGTG 10 106 516.2715257705082 1030.5284986078163 2 516.2715331912041 MULTI CID FTMS 0 0 0 7524 1369761.625 0.570228585933572 -5 0.1168022155761718 1 Unmodified _SGNRNRLGTG_ REV__ENSG00000176142|ENST00000319172|TMEM39A;REV__ENST00000486159.5_1_3:119156911-119180963:-|nuORF;REV__ENST00000486235.5_1_3:119165863-119180852:-|nuORF;REV__nc|ENSG00000176142|Q9NV64-2|TMEM39A 11.494710602746466 0.654671931888957 3 [SG]A{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GSA 11 -1 [SG]A{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} + + 23.189 13.822 1.7334 2.2502 2.2502 49.077 0.0 0.0 0.0 0.0 2.096436418716884 0.0 0.0 0 0.5 0.0 0.6462566630072955 0.0 [SG]A{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GSA 2.2502 - 213 + 1 1.808 69552.0 1.0 2398 5125 7524 HBL1_DMSO_200M_050219_1,7525 HBL1_DMSO_200M_050219_1,7525,SGNRNRLGTG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7527 39.741 83.0 415940.0 25 0 42453.0 + 11059 GDWCAFVRA 9 75 512.7372924685478 0 512.7372924685478 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _GDWCAFVRA_ REV__ENST00000394169.5_1_17:38081462-38082082:-|nuORF 7.289230182591677 0.3433663536648894 3 EQAA 4 -1 30.433 0.0 0.0 2.9735 0.0 0.0 351.104081524019 270.1573885553344 621.2614700793534 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 EQAA 2.9735 - 35 + 1 1.808 34087.0 1.0 2399 5126 7526 HBL1_DMSO_200M_050219_1,7527 HBL1_DMSO_200M_050219_1,7527,GDWCAFVRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7528 39.744 150.0 337400.0 25 0 25654.0 36398 SYRLDDTGN 9 94 520.7335693240166 0 520.7335693240166 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _SYRLDDTGN_ ENSG00000168411|ENST00000361070|RFWD3 7.289230182591677 0.3433663536648894 3 EQA 3 9 9.4247 0.0 0.0 0.9067 0.0 0.0 367.0971302478393 341.19501672916255 708.2921469770018 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 EQA 0.9067 - 26 + 1 1.808 44283.4 1.0 2400 5126 7526 HBL1_DMSO_200M_050219_1,7528 HBL1_DMSO_200M_050219_1,7528,SYRLDDTGN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7529 39.748 196.0 743240.0 25 0 224260.0 + 32572 SASSLAQVKAE 11 122 364.19736676619056 0 364.1972228884697 PEAK CID FTMS 0 0 0 7526 844023.9375 0.69108479836699 1 -0.0168647766113281 3 Unmodified _SASSLAQVKAE_ REV__ENSG00000115468|ENST00000264059|EFHD1;REV__nc|ENSG00000115468|Q9BUP0-2|EFHD1 7.101721422024254 0.47618401536486 3 Y 1 -1 6.9897 0.0 0.0 0.96226 0.0 0.0 428.2479460728288 132.0458925836547 560.2938386564834 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.96226 - 17 + 1 1.808 118502.5 1.0 2401 5126 7526 HBL1_DMSO_200M_050219_1,7529 HBL1_DMSO_200M_050219_1,7529,SASSLAQVKAE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7530 39.751 205.0 659330.0 25 0 38540.0 + 4236 DAPMTPKQI 9 143 508.75723967225866 1015.4999264113172 2 508.7578918337822 MULTI CID FTMS 0 0 0 7526 653282.9375 0.5961632679506991 -5 0.0632858276367187 4 Oxidation (M) _DAPM(Oxidation (M))TPKQI_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1 56.17704186161178 0.0281986971544335 3 {[DA]|[EG]}P{M(Oxidation (M))|F}TPKQ{I|L} 9 0 + 57.344 0.0 0.0 5.6469 5.6469 87.705 0.0 0.0 0.0 24.241858022403107 10.498037644757048 10.498037644757048 10.498037644757048 0 0.3807196863200844 2.0 0.2396518287104437 1.288106835214472 + + {[DA]|[EG]}P{M(Oxidation (M))|F}TPKQ{I|L};{[DA]|[EG]}P{M(Oxidation (M))|F}TP[Q{I|L}]K;{[DA]|[EG]}P{M(Oxidation (M))|F}TPK[AG]{I|L};{[DA]|[EG]}{I|L}[EC]PKQ{I|L};{[DA]|[EG]}P{M(Oxidation (M))|F}TPKAAV;{[DA]|[EG]}{I|L}[EC]P[Q{I|L}]K;{[DA]|[EG]}{I|L}{[WT]|[RM]}[WP]K;{[DA]|[EG]}{I|L}[EC]PK[AG]{I|L};{[DA]|[EG]}{I|L}{[ES]|[DT]|[{I|L}C]}A[WP]K;{[DA]|[EG]}P[R{M(Oxidation (M))|F}][WP]K 5.6469;4.6131;4.396;4.3306;3.618;3.2968;3.2672;3.0797;2.8796;2.8238 +;-;-;-;-;-;-;-;-;- + 1024 + 1 1.808 108442.0 1.0 2402 5126 7526 HBL1_DMSO_200M_050219_1,7530 HBL1_DMSO_200M_050219_1,7530,DAPMTPKQI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7532 39.757 222.0 487370.0 25 0 67399.0 + 36275 SYGPRAEEY 9 117 536.2403325603341 1070.466112187468 2 536.7402831912041 MULTI CID FTMS 0 0 0 7531 310787.84375 0.4181068590351837 -3 0.0257835388183593 1 Unmodified _SYGPRAEEY_ ENSG00000141522|ENST00000269321|ARHGDIA 26.268140514670165 0.1969607489560049 3 EYSY 4 7 20.807 0.0 0.0 1.9437 0.0 0.0 510.2564206616001 0.0 510.2564206616001 0.0 6.057743964882716 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 EYSY 1.9437 - 314 1 1.808 85736.2 1.0 2403 5127 7531 HBL1_DMSO_200M_050219_1,7532 HBL1_DMSO_200M_050219_1,7532,SYGPRAEEY False True SYGPRAEEY 39.757383 536.740283191204 26713599.0 7531.0 ENSG00000141522|ENST00000269321|ARHGDIA 7.592236359914144 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7533 39.762 230.0 292230.0 25 0 34061.0 + 45867 YYQTAPKAGY 10 90 581.2816159894232 1160.5486790456464 2 581.2831298708916 MULTI CID FTMS 0 0 0 7531 189712.015625 0.4499941701041309 1 -0.02130126953125 2 Unmodified _YYQTAPKAGY_ ENSG00000056097|ENST00000265069|ZFR;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 39.94969957227396 0.1580982266129622 3 YYQTHTAAP 9 5 61.085 0.0 0.0 5.2635 0.0 0.0 0.0 125.07248865299064 125.07248865299064 40.11615948493926 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.5 0.4247425010840047 YYQTHTAAP 5.2635 - 381 + 1 1.808 55113.4 1.0 2404 5127 7531 HBL1_DMSO_200M_050219_1,7533 HBL1_DMSO_200M_050219_1,7533,YYQTAPKAGY False True YYQTAPKAGY 39.761727 581.283129870892 2526362.5 7531.0 ENSG00000056097|ENST00000265069|ZFR;;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 7.088771820068359 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7534 39.765 195.0 262720.0 25 0 29387.0 + -1 LPMPVLTSYA 10 72 554.2923127808958 1106.5700726285916 2 554.2932617068291 MULTI CID FTMS 0 0 0 7531 785107.5625 1.0 0 0.0 3 Oxidation (M) _LPM(Oxidation (M))PVLTSYA_ REV__ENSG00000236699|ENST00000420470|ARHGEF38 3.944395688203298 0.708391353636983 3 [{M(Oxidation (M))|F}E]K 3 -1 10.458 0.0 0.0 0.94504 0.0 0.0 0.0 699.3783666561884 699.3783666561884 4.9730248405664685 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [{M(Oxidation (M))|F}E]K 0.94504 - 20 1 1.808 49160.1 1.0 2405 5127 7531 HBL1_DMSO_200M_050219_1,7534 HBL1_DMSO_200M_050219_1,7534,LPMPVLTSYA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7535 39.767 63.0 500520.0 25 0 26186.0 + -1 MNVAEVDKV 9 77 510.75349064374615 1019.4924283542924 2 510.7530700564384 MULTI CID FTMS 0 0 0 7531 677137.375 0.8561895708469697 -1 0.0168647766113281 4 Oxidation (M) _NM(Oxidation (M))VAKVDEV_ ENSG00000171858|ENST00000343986|RPS21 22.736283301280096 0.2418982879461534 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V{[{M(Oxidation (M))|F}D]|MM}V 6 -1 24.666 0.0 0.0 2.4194 0.0 0.0 0.0 295.1782625787719 295.1782625787719 11.170912423450403 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V{[{M(Oxidation (M))|F}D]|MM}V 2.4194 - 39 + 1 1.808 32840.5 1.0 2406 5127 7531 HBL1_DMSO_200M_050219_1,7535 HBL1_DMSO_200M_050219_1,7535,NMVAKVDEV False False MNVAEVDKV 39.767008 510.753070056438 4026876.75 7531.0 ENSG00000171858|ENST00000343986|RPS21 -0.4977351725101471 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7536 39.773 312.0 163730.0 25 0 35807.0 -1 0 33 1135.477995648553 3403.412157545859 3 1136.480273425579 MULTI CID FTMS 0 0 0 7531 461303.34375 1.0 0 0.0 5 3 D 1 -1 6.9897 0.0 0.0 0.20537 0.0 0.0 2395.944087549625 889.4152315729124 3285.3593191225373 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.20537 - 3 + 1 1.808 47964.0 1.0 2407 5127 7531 HBL1_DMSO_200M_050219_1,7536 HBL1_DMSO_200M_050219_1,7536, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7538 39.781 181.0 950540.0 25 0 100650.0 + -1 TYATGYEQDMN 11 101 654.7564714357928 1307.4983899383856 2 654.7576782107353 MULTI CID FTMS 0 0 0 7537 1054177.375 0.9747272361412244 5 -0.1072578430175781 1 Oxidation (M) _TYATGYEQDM(Oxidation (M))N_ REV__ENSG00000108510|ENST00000397786|MED13 18.1463463914782 0.6576820063886638 3 [YT]AT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DC]V[{M(Oxidation (M))|F}E] 11 -1 + 32.042 0.0 0.0 2.4506 2.4506 77.055 0.0 0.0 0.0 2.2233139348874147 -0.0314641036408787 -0.0314641036408787 9.018637558036676 0 0.0 1.2218487496163564 1.555462187404089 0.0 [YT]AT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DC]V[{M(Oxidation (M))|F}E];[YT]AT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDS[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V[DC]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PH[PS];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V[DC]Q[QT]H[PS];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V[DC]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TA{M(Oxidation (M))|F}V;{[DS]|[MA]|[CV]|TT}H[QT][WC(Carbamidomethyl (C))]V[{M(Oxidation (M))|F}E];[TA]YT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DC]V[{M(Oxidation (M))|F}E];{[DS]|[MA]|[CV]|TT}HP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDS[{M(Oxidation (M))|F}E];{[DS]|[MA]|[CV]|TT}HP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YG]DEE;{[DS]|[MA]|[CV]|TT}HP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WM][{M(Oxidation (M))|F}E] 2.4506;1.7609;1.7269;1.5542;1.321;1.2815;1.0947;1.0372;0.95911;0.89915 -;-;-;-;-;-;-;-;-;- 717 1 1.693 124555.6 1.0 2408 5128 7537 HBL1_DMSO_200M_050219_1,7538 HBL1_DMSO_200M_050219_1,7538,TYATGYEQDMN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7539 39.784 177.0 516130.0 25 0 50866.0 2176 AQAHTSAPTPA 11 107 526.2607786892623 1050.5070044453246 2 526.2626220583916 MULTI CID FTMS 0 0 0 7537 980900.625 0.2214807078888311 -5 0.0678138732910156 2 Unmodified _AQAHTSAPTPA_ ENSG00000283439|ENST00000636696|SPEM3 17.11289562659939 0.6791789249425932 3 [TP]SVAA 6 8 38.409 0.0 0.0 3.6562 0.0 0.0 0.0 521.1984466662808 521.1984466662808 19.49433219358141 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.3494850021680094 0.0 [TP]SVAA 3.6562 - 516 1 1.693 73374.6 1.0 2409 5128 7537 HBL1_DMSO_200M_050219_1,7539 HBL1_DMSO_200M_050219_1,7539,AQAHTSAPTPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7540 39.789 275.0 113050.0 25 0 4658.8 -1 0 63 741.3186837205789 2220.9342217619364 3 741.6498290896416 MULTI CID FTMS 0 0 0 7537 397947.0 1.0 0 0.0 3 3 EQ 2 -1 7.0783 0.0 0.0 0.31871 0.0 0.0 1548.5780338730676 412.23252283267817 1960.8105567057453 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EQ 0.31871 - 6 + 1 1.693 33244.6 1.0 2410 5128 7537 HBL1_DMSO_200M_050219_1,7540 HBL1_DMSO_200M_050219_1,7540, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7542 39.793 0.13 351960000.0 25 0 77160000.0 + 5044 DGYEQAARV 9 59 504.7401092137372 1007.4656654942744 2 504.7407409548759 MULTI CID FTMS 0 0 0 7541 466370112.0 0.8380745419478158 4 -0.0908203125 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 32.78568957990786 0.1150597335874693 3 [DG]YEQAA[RV] 9 0 + 58.447 0.0 0.0 5.8013 5.8013 87.103 0.0 0.0 0.0 45.61561668603293 4.762036441594191 4.762036441594191 9.208187539523747 0 0.4247425010840047 0.958607314841775 0.4247425010840047 0.3252574989159953 + + [DG]YEQAA[RV];[DG]YE[AG]AA[RV];[DG]YV[DN]A[RV];[DG]YEV[NG][RV];[DG]YVE[NG][RV] 5.8013;4.8873;3.9952;3.9402;3.6964 +;-;-;-;- + 101 + 1 1.693 40442.1 1.0 2411 5129 7541 HBL1_DMSO_200M_050219_1,7542 HBL1_DMSO_200M_050219_1,7542,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7543 39.794 11.0 3619100.0 25 0 581520.0 + 11222 GEPREGEI 8 60 443.7163037799485 885.418054626697 2 443.7164794802666 MULTI CID FTMS 0 0 0 7541 6447474.0 0.4693078694603341 8 -0.2722892761230469 2 Unmodified _GEPREGEI_ REV__ENST00000557806.5_1_14:24641555-24641950:+|nuORF 18.1463463914782 0.6428359029697936 3 {[DA]|[EG]}[RP]ADE{I|L} 8 -1 + 44.398 0.0 0.0 5.0143 5.0143 55.692 0.0 0.0 0.0 12.078343878162343 29.79364375124895 12.078343878162343 0.0 0 0.7742275032520141 2.0 0.0 0.0 {[DA]|[EG]}[RP]ADE{I|L};{[DA]|[EG]}[RP]EGE{I|L};{[DA]|[EG]}[RP]AE{NN|[MP]|[D{I|L}]|[EV]};{[DA]|[EG]}[RP]EA{NN|[MP]|[D{I|L}]|[EV]};{[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}H]|[RQ]}GE{I|L};[RP]{[DA]|[EG]}ADE{I|L};[RP]{[DA]|[EG]}EGE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}H]|[RQ]}A{NN|[MP]|[D{I|L}]|[EV]};[RP]{[DA]|[EG]}AE{NN|[MP]|[D{I|L}]|[EV]};[RP]{[DA]|[EG]}EA{NN|[MP]|[D{I|L}]|[EV]} 5.0143;5.0143;4.3646;4.3646;1.8069;1.7414;1.7414;1.1572;1.0917;1.0917 -;+;-;-;-;-;-;-;-;- + 68 1 1.693 42677.6 1.0 2412 5129 7541 HBL1_DMSO_200M_050219_1,7543 HBL1_DMSO_200M_050219_1,7543,GEPREGEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7544 39.798 194.0 693110.0 25 0 40380.0 + 10656 FVQLCPYKGQG 11 108 620.3132969374445 1238.612040941689 2 620.3135253787041 MULTI CID FTMS 0 0 0 7541 882173.0 0.95906306390047 -4 0.0600776672363281 3 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 3 [PA]PMPPPPPPQN 12 -1 [PA]PM + + 81.02 13.919 3.5133 6.5412 6.5412 60.75 0.0 0.0 0.0 0.0 56.288605077257856 0.0 0.0 0 2.774227503252014 0.0 0.0 1.8943525400371293 [PA]PMPPPPPPQN 6.5412 - 6101 + 1 1.693 105617.2 1.0 2413 5129 7541 HBL1_DMSO_200M_050219_1,7544 HBL1_DMSO_200M_050219_1,7544,FVQLCPYKGQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7545 39.803 261.0 446050.0 25 0 54199.0 + 21595 LPKPPGRGV 9 103 460.78694340186655 919.5593338705332 2 460.7870971560478 MULTI CID FTMS 0 0 0 7541 445525.375 0.205649345831147 11 -0.4496040344238281 4 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 32.30548876998284 0.1201446275138228 3 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG 8 5 60.482 0.0 0.0 6.5773 0.0 0.0 0.0 68.05140100650624 68.05140100650624 51.21309682371827 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3807196863200844 0.4247425010840047 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG 6.5773 - 119 + 1 1.693 92961.4 1.0 2414 5129 7541 HBL1_DMSO_200M_050219_1,7545 HBL1_DMSO_200M_050219_1,7545,LPKPPGRGV True True LPKPPGRGV 39.802922 460.787097156048 219867716.0 7541.0 nc|ENSG00000182325|Q8N531-2|FBXL6;;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;;ENSG00000182325|ENST00000331890|FBXL6 6.570767879486084 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7546 39.808 297.0 494110.0 25 0 65039.0 -1 0 152 337.6787729253828 673.3429929175655 2 337.6785461306572 MULTI CID FTMS 0 0 0 7541 407697.46875 0.6040540825853142 -4 0.0600776672363281 5 3 {[VA]|[{I|L}G]}PYPQ 6 -1 + 61.731 0.0 0.0 9.1678 9.1678 98.404 0.0 0.0 0.0 24.09256854528806 15.529324278304912 15.529324278304912 37.95970476516786 0 0.6747425010840047 2.0 0.0 0.6109243748081782 {[VA]|[{I|L}G]}PYPQ;{[VA]|[{I|L}G]}P[PA][YG];{[VA]|[{I|L}G]}P[VS]{[DS]|[MA]|[CV]|TT};EE[R{I|L}]Q 9.1678;3.5303;3.0606;1.7452 -;-;-;- 106 + 1 1.693 118147.0 1.0 2415 5129 7541 HBL1_DMSO_200M_050219_1,7546 HBL1_DMSO_200M_050219_1,7546, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7547 39.814 297.0 333790.0 25 0 68159.0 + 15358 GQAPPLSQA 9 125 434.8819316731701 0 435.2205993533134 PEAK CID FTMS 0 0 0 7541 224310.796875 1.0 0 0.0 6 Unmodified _IPMLMTFFCTV_ ENSG00000176986|ENST00000345254|SEC24C 6.2057823575117 0.47618401536486 3 TR 2 10 8.5835 0.0 0.0 0.98917 0.0 0.0 96.32757076645892 511.2525728815062 607.5801436479651 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TR 0.98917 - 39 + 1 1.693 85499.6 1.0 2416 5129 7541 HBL1_DMSO_200M_050219_1,7547 HBL1_DMSO_200M_050219_1,7547,IPMLMTFFCTV False False GQAPPLSQA 39.813781 435.220599353313 1801869.75 7541.0 ENSG00000176986|ENST00000345254|SEC24C 4.74842635790507 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7549 39.818 28.0 2746500.0 25 0 462820.0 -1 0 54 904.915641577991 1807.8167302227816 2 904.9166747927666 MULTI CID FTMS 0 0 0 7548 2355426.25 0.6547087660410233 2 -0.0453834533691406 1 3 AT 2 -1 12.519 0.0 0.0 0.69247 0.0 0.0 1210.5031448729756 422.2012117975219 1632.7043566704974 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 AT 0.69247 - 7 + 1 1.693 59163.6 1.0 2417 5130 7548 HBL1_DMSO_200M_050219_1,7549 HBL1_DMSO_200M_050219_1,7549, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7550 39.823 301.0 188600.0 25 0 30108.0 44421 YMHEGFERA 9 85 570.2494994997978 0 570.2494994997978 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _YMHEGFERA_ ENSG00000169604|ENST00000303714|ANTXR1;ENST00000463335.1_1_2:69240622-69330161:+|nuORF;nc|ENSG00000169604|Q9H6X2-2|ANTXR1;nc|ENSG00000169604|Q9H6X2-3|ANTXR1;nc|ENSG00000169604|Q9H6X2-4|ANTXR1;nc|ENSG00000169604|Q9H6X2-5|ANTXR1;nc|ENSG00000169604|Q9H6X2-6|ANTXR1 3.944395688203298 0.3444685223463734 3 N 1 9 5.4846 0.0 0.0 0.48174 0.0 0.0 260.12661022830804 761.2844332330686 1021.4110434613768 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.48174 - 4 + 1 1.693 50198.8 1.0 2418 5130 7548 HBL1_DMSO_200M_050219_1,7550 HBL1_DMSO_200M_050219_1,7550,YMHEGFERA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7551 39.825 19.0 2746200.0 25 0 178880.0 + 943 AFISKVSTH 9 87 495.2743190430227 988.5340851528454 2 495.2735778689384 MULTI CID FTMS 0 0 0 7548 2096576.75 0.7286546370357961 -3 0.0623626708984375 3 Unmodified _AFISKVSTH_ ENSG00000122882|ENST00000372979|ECD;nc|ENSG00000122882|O95905-2|ECD;nc|ENSG00000122882|O95905-3|ECD 32.78568957990786 0.1150597335874693 3 A{M(Oxidation (M))|F}{I|L}NQAA 7 6 59.914 0.0 0.0 6.0609 0.0 0.0 0.0 270.1576021783813 270.1576021783813 45.30955292930221 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.3807196863200844 A{M(Oxidation (M))|F}{I|L}NQAA 6.0609 - 292 + 1 1.693 46471.3 1.0 2419 5130 7548 HBL1_DMSO_200M_050219_1,7551 HBL1_DMSO_200M_050219_1,7551,AFISKVSTH True True AFISKVSTH 39.824508 495.273577868938 25821142.0 7548.0 nc|ENSG00000122882|O95905-2|ECD;;nc|ENSG00000122882|O95905-3|ECD;;ENSG00000122882|ENST00000372979|ECD 2.8844088315963745 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7552 39.829 256.0 1436200.0 25 0 180510.0 + 10073 FPRTPARSV 9 177 344.1976176394237 1029.571023518471 3 344.1971618533134 MULTI CID FTMS 0 0 0 7548 640641.0625 0.1649152463073747 -7 0.1088752746582031 4 Unmodified _FPRTPARSV_ ENSG00000277972|ENST00000613478|CISD3 24.99096001346401 0.2132109383330889 3 PT[RP]E 5 5 22.72 0.0 0.0 2.2068 0.0 0.0 431.24998671699376 0.0 431.24998671699376 0.0 9.449237304209888 0.0 0.0 0 0.3807196863200844 0.0 0.3054621874040891 0.3807196863200844 PT[RP]E 2.2068 - 694 1 1.693 293085.2 1.0 2420 5130 7548 HBL1_DMSO_200M_050219_1,7552 HBL1_DMSO_200M_050219_1,7552,FPRTPARSV False True FPRTPARSV 39.829251 344.197161853313 28882670.0 7548.0 ENSG00000277972|ENST00000613478|CISD3 3.709251085917155 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7553 39.836 393.0 209550.0 25 0 45770.0 -1 0 45 1170.174842584479 0 1170.174975574017 PEAK CID FTMS 0 0 0 7548 361801.8125 1.0 0 0.0 5 3 E 1 -1 6.9897 0.0 0.0 0.29892 0.0 0.0 1682.1062636828267 524.1610868027336 2206.26735048556 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.29892 - 8 + 1 1.693 63286.0 1.0 2421 5130 7548 HBL1_DMSO_200M_050219_1,7553 HBL1_DMSO_200M_050219_1,7553, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7555 39.84 7.8 3970900.0 25 0 524760.0 + 4001 DALRQTASV 9 56 480.7585518328315 959.502550732463 2 480.7584106326103 MULTI CID FTMS 0 0 0 7554 8389539.0 0.7288839660694992 3 -0.0654373168945312 1 Unmodified _DALRQTASV_ ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT 43.77239144664712 0.0547478964384323 3 {[DA]|[EG]}[R{I|L}]QTASV 9 0 + 65.168 0.0 0.0 6.7918 6.7918 86.059 0.0 0.0 0.0 5.051499783199063 16.478174818886373 5.051499783199063 5.051499783199063 0 1.0 1.5228787452803376 0.805462187404089 0.0 + + {[DA]|[EG]}[R{I|L}]QTASV;[VS]{M(Oxidation (M))|F}[H{I|L}]TASV;{[DA]|[EG]}[R{I|L}][AG]TASV 6.7918;6.2653;5.8321 +;-;- + 100 1 1.693 29648.3 1.0 2422 5131 7554 HBL1_DMSO_200M_050219_1,7555 HBL1_DMSO_200M_050219_1,7555,DALRQTASV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7556 39.846 337.0 132830.0 25 0 7297.7 + 25157 MRKVSPSERD 10 91 602.8072387576103 0 602.8072387576103 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _MRKVSPSERD_ REV__ENSG00000068305|ENST00000557942|MEF2A;REV__ENST00000561125.2_1_15:100246921-100252973:+|nuORF;REV__nc|ENSG00000068305|Q02078-3|MEF2A;REV__nc|ENSG00000068305|Q02078-4|MEF2A;REV__nc|ENSG00000068305|Q02078-5|MEF2A;REV__nc|ENSG00000068305|Q02078-6|MEF2A;REV__nc|ENSG00000068305|Q02078-7|MEF2A;REV__nc|ENSG00000068305|Q02078-8|MEF2A;REV__nc|ENSG00000068305|Q02078|MEF2A 3.5964929083625545 0.3961065659209837 3 W 1 -1 5.4846 0.0 0.0 0.45568 0.0 0.0 602.2697987048706 412.2313936822876 1014.5011923871582 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.45568 - 13 + 1 1.693 35024.5 1.0 2423 5131 7554 HBL1_DMSO_200M_050219_1,7556 HBL1_DMSO_200M_050219_1,7556,MRKVSPSERD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7557 39.849 104.0 827990.0 25 0 116900.0 + 13170 HFTIFLRY 8 92 366.2019810505181 0 366.2013122439384 PEAK CID FTMS 0 0 0 7554 779226.625 0.7710242759958867 1 -0.0228309631347656 3 Unmodified _HFTIFLRY_ REV__ENSG00000148386|ENST00000619315|LCN9;REV__nc|ENSG00000148386|Q8WX39|LCN9 7.910154910731844 0.5650536163073903 3 {I|L}A 2 -1 8.5835 0.0 0.0 1.1752 0.0 0.0 365.1934010576123 178.0514315240844 543.2448325816966 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A 1.1752 - 14 + 1 1.693 73521.7 1.0 2424 5131 7554 HBL1_DMSO_200M_050219_1,7557 HBL1_DMSO_200M_050219_1,7557,HFTIFLRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7558 39.853 236.0 685250.0 25 0 57335.0 36740 TDSLSRSCCY 10 142 567.7323350385341 1133.450117143868 2 567.7320434451103 MULTI CID FTMS 0 0 0 7554 698685.0 0.4648641069150519 -3 0.0636138916015625 4 Unmodified _TDSLSRSCCY_ ENST00000371429.3_1_1:54266382-54266484:-|nuORF 18.1463463914782 0.5430639438673815 3 [EP]AAYKAC 8 9 56.111 0.0 0.0 4.9504 0.0 0.0 0.0 297.05269217732433 297.05269217732433 29.684086274290262 0.0 0.0 0.0 0 0.9247425010840048 0.6020599913279624 0.899649864804614 0.6747425010840047 [EP]AAYKAC 4.9504 - 1488 1 1.693 124267.0 1.0 2425 5131 7554 HBL1_DMSO_200M_050219_1,7558 HBL1_DMSO_200M_050219_1,7558,TDSLSRSCCY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7559 39.859 333.0 237750.0 25 0 17290.0 + -1 MSKHITMC 8 115 483.7139808412699 0 483.7141601443291 PEAK CID FTMS 0 0 0 7554 241710.765625 1.0 0 0.0 5 Oxidation (M) _MSKHITM(Oxidation (M))C_ REV__ENSG00000103994|ENST00000564754|ZNF106;REV__nc|ENSG00000103994|Q9H2Y7-2|ZNF106;REV__nc|ENSG00000103994|Q9H2Y7|ZNF106 8.593279151180031 0.5573742999696857 3 MT 2 -1 11.471 0.0 0.0 1.1882 0.0 0.0 482.21832315539297 248.0793856256469 730.2977087810399 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 MT 1.1882 - 15 + 1 1.693 65593.8 1.0 2426 5131 7554 HBL1_DMSO_200M_050219_1,7559 HBL1_DMSO_200M_050219_1,7559,MSKHITMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7561 39.869 286.0 710120.0 25 0 68957.0 + 32646 SAYYTSRKI 9 149 363.529005168043 1087.565186104329 3 363.5286743044853 MULTI CID FTMS 0 0 0 7560 564452.5625 1.0 0 0.0 1 Unmodified _SAYYTSRKI_ ENST00000473858.5_1_1:24294155-24306819:-|nuORF;nc|ENSG00000188529|O75494-3|SRSF10;nc|ENSG00000188529|O75494-5|SRSF10;nc|ENSG00000188529|O75494-6|SRSF10 39.94969957227396 0.0757326808254658 3 {[SA]|[TG]}YYTS[RK]{I|L} 9 0 + 64.086 0.0 0.0 5.8926 5.8926 90.881 0.0 0.0 0.0 35.397003088799394 2.570716371698325 2.570716371698325 26.859056417552225 0 0.3807196863200844 1.6989700043360187 1.2302046884880935 0.3252574989159953 + + {[SA]|[TG]}YYTS[RK]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KK{I|L}Y[R{M(Oxidation (M))|F}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KKY{I|L}[R{M(Oxidation (M))|F}];{[SA]|[TG]}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}K[QT]P;{[SA]|[TG]}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}K[TA]GP;{[SA]|[TG]}[VS]R[C(Carbamidomethyl (C))R][RP] 5.8926;3.423;2.7257;2.3875;1.676;0.96185 +;-;-;-;-;- + 364 + 1 1.649 167359.5 1.0 2427 5132 7560 HBL1_DMSO_200M_050219_1,7561 HBL1_DMSO_200M_050219_1,7561,SAYYTSRKI True True SAYYTSRKI 39.868724 363.528674304485 2717200.5 7560.0 nc|ENSG00000188529|O75494-5|SRSF10;;nc|ENSG00000188529|O75494-6|SRSF10;;ENST00000473858.5_1_1:24294155-24306819:-|nuORF;;nc|ENSG00000188529|O75494-3|SRSF10 4.209041158358256 3.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 7562 39.874 302.0 334560.0 25 0 19393.0 + 32181 RVVDELDNQM 10 122 617.7893413485374 1233.5641297638747 2 617.7883788943291 MULTI CID FTMS 0 0 0 7560 375286.0625 0.1274401899414952 -4 0.0864448547363281 2 Oxidation (M) _RVVDELDNQM(Oxidation (M))_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 90.13494162714682 0.0093239051209448 3 [RV]VDE{I|L}DNQ{M(Oxidation (M))|F} 10 0 + 99.034 0.0 0.0 8.0283 8.0283 92.713 0.0 0.0 0.0 13.379231027444405 63.95365019512085 13.379231027444405 9.164539485499262 0 1.305462187404089 1.0 1.1549471895720984 0.805462187404089 + + [RV]VDE{I|L}DNQ{M(Oxidation (M))|F};[RV]VDE{I|L}DGGQ{M(Oxidation (M))|F};[RV]VDE{I|L}DN[AG]{M(Oxidation (M))|F};[RV]VDE{I|L}DGG[AG]{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}E{I|L}DNQ{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]E{I|L}DNQ{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}E{I|L}DGGQ{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}E{I|L}DN[AG]{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]E{I|L}DN[AG]{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]E{I|L}DGGQ{M(Oxidation (M))|F} 8.0283;7.2853;7.2853;6.5453;5.8133;5.7989;5.0704;5.0704;5.0559;5.0559 +;-;-;-;-;-;-;-;-;- + 529 1 1.649 79224.4 1.0 2428 5132 7560 HBL1_DMSO_200M_050219_1,7562 HBL1_DMSO_200M_050219_1,7562,RVVDELDNQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7563 39.88 310.0 139740.0 25 0 4767.8 27197 PGGRPIHKRKR 11 88 651.406607910993 0 651.7401611208916 PEAK CID FTMS 0 0 0 -1 0 3 Unmodified _PGGRPIHKRKR_ ENSG00000146410|ENST00000420702|MTFR2 3.5964929083625545 0.4761840153648598 3 EQAA 4 11 18.488 0.0 0.0 1.4213 0.0 0.0 628.4403387694484 270.1570833795532 898.5974221490017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 EQAA 1.4213 - 44 + 1 1.649 38584.4 1.0 2429 5132 7560 HBL1_DMSO_200M_050219_1,7563 HBL1_DMSO_200M_050219_1,7563,PGGRPIHKRKR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7565 39.884 26.0 1980000.0 25 0 319670.0 -1 PLHWVCKK 8 63 534.2943387729905 1066.574124612781 2 534.2935668826103 MULTI CID FTMS 0 0 0 7564 1957985.625 0.7352961057842748 2 -0.07550048828125 1 Carbamidomethyl (C) _PLHWVC(Carbamidomethyl (C))KK_ ENSG00000139187|ENST00000356986|KLRG1;ENST00000538029.1_1_12:9102760-9162130:+|nuORF;nc|ENSG00000139187|Q96E93|KLRG1 14.581692164780916 0.6954967302934248 3 {I|L}PPEP 5 -1 65.701 0.0 0.0 6.16 0.0 0.0 0.0 530.2778460187624 530.2778460187624 58.7113751626007 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 {I|L}PPEP 6.16 - 20 + 1 1.649 50503.4 1.0 2430 5133 7564 HBL1_DMSO_200M_050219_1,7565 HBL1_DMSO_200M_050219_1,7565,PLHWVCKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7566 39.885 34.0 736940.0 25 0 102360.0 + -1 TMFCMLHSRT 10 50 642.7779334616218 1283.5413139900436 2 642.7778808474541 MULTI CID FTMS 0 0 0 7564 1337002.25 0.5753253196718543 7 -0.3587837219238281 2 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))TM(Oxidation (M))FCMLHSRT_ REV__ENST00000500268.6_1_4:10455287-10455473:-|nuORF 3.2813086475875832 0.7114585191678878 3 EQAA[RV] 6 -1 20.635 0.0 0.0 1.6077 0.0 0.0 611.185937832838 0.0 611.185937832838 0.0 15.150312510170778 0.0 0.0 0 0.0 0.0 0.0 0.0 EQAA[RV] 1.6077 - 31 + 1 1.649 25704.5 1.0 2431 5133 7564 HBL1_DMSO_200M_050219_1,7566 HBL1_DMSO_200M_050219_1,7566,TMFCMLHSRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7567 39.89 259.0 1095400.0 25 0 227560.0 + 36211 SVYDGHGGEEV 11 134 574.7455897808525 1147.4766266285048 2 574.7466918826103 MULTI CID FTMS 0 0 0 7564 707084.8125 0.6510645343254354 -2 0.0436439514160156 3 Unmodified _SVYDGHGGEEV_ ENSG00000115241|ENST00000344034|PPM1G 47.594388314883695 0.1309523012099263 3 [VS]Y{[C(Carbamidomethyl (C))G]|[NC]}DYVSV 10 6 + 55.244 0.0 0.0 4.8144 4.8144 73.766 0.0 0.0 0.0 7.6190258766229135 11.588709367037282 7.6190258766229135 1.249387366082999 0 1.305462187404089 2.0 0.3807196863200844 0.0 [VS]Y{[C(Carbamidomethyl (C))G]|[NC]}DYVSV;[VS]Y{[C(Carbamidomethyl (C))G]|[NC]}M{M(Oxidation (M))|F}VSV;[VS]C[YN]DYVSV;[VS]C[YN]M{M(Oxidation (M))|F}VSV;[VS]Y{[C(Carbamidomethyl (C))G]|[NC]}M{M(Oxidation (M))|F}WV;[VS]Y[YN][DC]VSV;[VS]C[YN]M{M(Oxidation (M))|F}WV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AEEEEVSV;[VS]Y{[C(Carbamidomethyl (C))G]|[NC]}DVYSV;{[HG]|PP}DYGGEEVSV 4.8144;4.7055;4.6482;4.5393;4.3986;4.3326;4.2324;4.1504;4.0668;4.0331 -;-;-;-;-;-;-;-;-;- 2031 1 1.649 216216.4 1.0 2432 5133 7564 HBL1_DMSO_200M_050219_1,7567 HBL1_DMSO_200M_050219_1,7567,SVYDGHGGEEV False True SVYDGHGGEEV 39.889982 574.74669188261 5537594.5 7564.0 ENSG00000115241|ENST00000344034|PPM1G 7.140113353729248 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7568 39.895 283.0 520450.0 25 0 54442.0 + 1061 AGGPKAPA 8 166 334.6898056718642 667.3650584105284 2 334.6893188357353 MULTI CID FTMS 0 0 0 7564 708187.5625 0.0617334074606333 14 -0.8701324462890625 4 Unmodified _AGGPKAPA_ REV__ENSG00000139842|ENST00000375440|CUL4A;REV__ENST00000474116.5_1_13:113863941-113874010:+|nuORF;REV__ENST00000494985.5_1_13:113863983-113873323:+|nuORF 5.230669730166228 0.792582437072536 3 A{I|L}NHT{I|L} 6 -1 + 58.439 0.0 0.0 8.7566 8.7566 95.711 0.0 0.0 0.0 20.546218740408904 10.022431204052324 10.022431204052324 11.962724883926654 0 0.3494850021680094 2.0 1.035666875892183 0.3494850021680094 A{I|L}NHT{I|L};[HN]T{I|L}{I|L}A;A{I|L}GGHT{I|L};[HT]N{I|L}{I|L}A;[HT]{I|L}N{I|L}A;[{I|L}A][DP][RP];[HT]GG{I|L}{I|L}A;[HT]{I|L}GG{I|L}A 8.7566;6.9641;6.8214;3.476;3.3316;2.7172;0.92352;0.77907 -;-;-;-;-;-;-;- 132 + 1 1.649 117475.9 1.0 2433 5133 7564 HBL1_DMSO_200M_050219_1,7568 HBL1_DMSO_200M_050219_1,7568,AGGPKAPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7569 39.896 36.0 1584300.0 25 0 207500.0 + 22325 LPSHVPSAS 9 90 447.7370891037724 893.4596252743447 2 447.7375366091728 MULTI CID FTMS 0 0 0 7564 644603.375 0.8022527615020256 -3 0.0661964416503906 5 Unmodified _LPSHVPSAS_ REV__ENSG00000174373|ENST00000680220|RALGAPA1;REV__ENST00000443361.1_1_9:108285096-108287232:+|nuORF;REV__ENST00000554652.5_1_14:36147090-36221314:-|nuORF;REV__nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0|RALGAPA1 16.942295170755138 0.3780752226737986 3 {I|L}PS 3 -1 42.92 0.0 0.0 4.8037 0.0 0.0 0.0 593.2686861627561 593.2686861627561 31.95046257204389 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PS 4.8037 + + 103 + 1 1.649 54005.8 1.0 2434 5133 7564 HBL1_DMSO_200M_050219_1,7569 HBL1_DMSO_200M_050219_1,7569,LPSHVPSAS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7570 39.902 291.0 647700.0 25 0 113410.0 + 4244 DAPPSRVSV 9 130 464.2480315316318 926.4815101300636 2 464.2480346560478 MULTI CID FTMS 0 0 0 7564 565266.0 0.1680870025219027 -5 0.1072578430175781 6 Unmodified _DAPPSRVSV_ ENSG00000180900|ENST00000356994|SCRIB;nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB 21.53697664764585 0.2571576504437394 3 {[DA]|[EG]}PP 4 5 38.672 0.0 0.0 4.1741 0.0 0.0 0.0 543.2923678033811 543.2923678033811 21.71704296901929 0.0 0.0 0.0 0 0.6989700043360187 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}PP 4.1741 + + 177 + 1 1.649 144263.4 1.0 2435 5133 7564 HBL1_DMSO_200M_050219_1,7570 HBL1_DMSO_200M_050219_1,7570,DAPPSRVSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7572 39.907 197.0 1213400.0 25 0 185340.0 41686 VPRSEQPAL 9 127 498.7770266984527 995.5395004637054 2 498.7775146365166 MULTI CID FTMS 0 0 0 7571 1398890.75 0.9678517867263012 3 -0.1596755981445312 1 Unmodified _VPRSEQPAL_ ENST00000464774.6_1_2:74685729-74686813:+|nuORF;ENST00000466835.5_1_2:74685568-74686813:+|nuORF;ENST00000492047.1_1_2:74686102-74686813:+|nuORF 28.486842064014134 0.1687311288560894 3 VPPDP 5 6 62.449 0.0 0.0 6.2728 0.0 0.0 0.0 487.2513521783813 487.2513521783813 49.745462655597095 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3252574989159953 0.0 VPPDP 6.2728 - 677 + 1 1.649 184385.6 1.0 2436 5134 7571 HBL1_DMSO_200M_050219_1,7572 HBL1_DMSO_200M_050219_1,7572,VPRSEQPAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7573 39.914 364.0 347150.0 25 0 20306.0 + 5487 DLSDMYTNC 9 150 531.1969979671973 1060.3794430011944 2 531.1972534060478 MULTI CID FTMS 0 0 0 7571 290104.53125 0.1958596227955165 9 -0.5487937927246094 2 Unmodified _DLSDMYTNC_ REV__ENSG00000132801|ENST00000255152|ZSWIM3 6.2057823575117 0.6980434486082533 3 ARV 3 -1 17.703 0.0 0.0 1.6695 0.0 0.0 716.1858998029312 0.0 716.1858998029312 0.0 5.696443055739668 0.0 0.0 0 0.0 0.0 0.0 0.0 ARV 1.6695 - 149 1 1.649 99264.5 1.0 2437 5134 7571 HBL1_DMSO_200M_050219_1,7573 HBL1_DMSO_200M_050219_1,7573,DLSDMYTNC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7574 39.92 335.0 890070.0 25 0 247420.0 + 21598 LPKPPGRGV 9 198 307.52731452707565 919.560114181427 3 307.5271179080009 MULTI CID FTMS 0 0 0 7571 631181.0 0.0446980003982717 15 -0.909088134765625 3 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 20.453626601364224 0.2830276176381075 3 {I|L}PKPVRNP 8 4 + 42.258 0.0 0.0 4.5954 4.5954 76.564 0.0 0.0 0.0 33.166719318022245 2.967847869770459 2.967847869770459 3.2735893438633 0 0.0 0.0 0.0 0.7302046884880937 {I|L}PKPVRNP;{I|L}PKPPRNV;{I|L}PKVPRNP;{I|L}PKPVRGGP;{I|L}PKPPRGGV;{I|L}PKVPRGGP 4.5954;4.2394;3.888;3.5882;3.2322;2.8807 -;-;-;-;-;- 227 + 1 1.649 237001.8 1.0 2438 5134 7571 HBL1_DMSO_200M_050219_1,7574 HBL1_DMSO_200M_050219_1,7574,LPKPPGRGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7575 39.927 395.0 728860.0 25 0 103110.0 + 13299 HIYHQHFDSV 10 171 428.2029094513044 1281.5868989541132 3 428.2023803591728 MULTI CID FTMS 0 0 0 7571 369911.9375 0.6464244327968117 -1 0.0217933654785156 4 Unmodified _HIYHQHFDSV_ ENSG00000114978|ENST00000396049|MOB1A;ENST00000497054.5_1_2:74386211-74405801:-|nuORF 34.221707139014875 0.2185845369562963 3 [H{I|L}]YHQH{M(Oxidation (M))|F}DSV 10 0 + 62.803 0.0 0.0 4.9004 4.9004 83.403 0.0 0.0 0.0 19.20818753952375 16.53212513775344 16.53212513775344 9.164539485499256 0 0.3252574989159953 1.6989700043360187 0.4247425010840047 0.0 + + [H{I|L}]YHQH{M(Oxidation (M))|F}DSV;[H{I|L}]YH[AG]H{M(Oxidation (M))|F}DSV;[H{I|L}][DC]P{I|L}H{M(Oxidation (M))|F}DSV;[H{I|L}]YHQ{[{M(Oxidation (M))|F}D]|MM}HSV;{[WN]|[YH]}{I|L}HQH{M(Oxidation (M))|F}DSV;[HQ]{[RE]|[WV]}QH{M(Oxidation (M))|F}DSV;[AG]{[RE]|[WV]}HQH{M(Oxidation (M))|F}DSV;[H{I|L}][DC]P{M(Oxidation (M))|F}D{I|L}HSV;[H{I|L}]YH[AG]{[{M(Oxidation (M))|F}D]|MM}HSV;[HQ]{[WN]|[YH]}{I|L}H{M(Oxidation (M))|F}DSV 4.9004;4.1853;4.0018;3.5966;3.4016;2.9058;2.8985;2.8945;2.8815;2.8302 +;-;-;-;-;-;-;-;-;- + 1709 1 1.649 224202.8 1.0 2439 5134 7571 HBL1_DMSO_200M_050219_1,7575 HBL1_DMSO_200M_050219_1,7575,HIYHQHFDSV False True HIYHQHFDSV 39.927001 428.202380359173 3027352.75 7571.0 ENST00000497054.5_1_2:74386211-74405801:-|nuORF;;ENSG00000114978|ENST00000396049|MOB1A 6.1655527750651045 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7576 39.934 419.0 351760.0 25 0 27697.0 + -1 VQCQADYY 8 133 523.714212323282 1045.413871713364 2 523.7155639529228 MULTI CID FTMS 0 0 0 7571 238722.234375 0.083355966091912 5 -0.2746315002441406 5 Carbamidomethyl (C) _VQC(Carbamidomethyl (C))QADYY_ REV__ENSG00000168615|ENST00000487273|ADAM9;REV__nc|ENSG00000168615|Q13443-2|ADAM9 16.942295170755138 0.6606234159769251 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q][YQ]DV 8 -1 + 29.387 0.0 0.0 2.811 2.811 80.623 0.0 0.0 0.0 10.006119861483135 12.27347323042898 10.006119861483135 14.314673056988232 0 0.2396518287104437 2.0 0.0 0.2887254899964357 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q][YQ]DV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MN;[QP]DD{NN|[MP]|[D{I|L}]|[EV]}VMN;[QP]DD[{M(Oxidation (M))|F}V]YY;[{M(Oxidation (M))|F}E][{M(Oxidation (M))|F}V][YQ]DV;[QP][C(Carbamidomethyl (C))H]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MN;[MT][YQ][DP][YE] 2.811;1.4417;1.078;0.8952;0.83384;0.74629;0.087539 -;-;-;-;-;-;- 162 1 1.649 119163.7 1.0 2440 5134 7571 HBL1_DMSO_200M_050219_1,7576 HBL1_DMSO_200M_050219_1,7576,VQCQADYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7577 39.946 634.0 58329.0 25 0 8493.2 -1 0 35 1170.509206885964 0 1170.843066394329 PEAK CID FTMS 0 0 0 7571 88601.015625 0.7247421704708144 -1 0.0217933654785156 6 3 P 1 -1 6.9897 0.0 0.0 0.29883 0.0 0.0 1169.4791124503668 1069.4656466119752 2238.944759062342 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.29883 - 6 + 1 1.649 36311.1 1.0 2441 5134 7571 HBL1_DMSO_200M_050219_1,7577 HBL1_DMSO_200M_050219_1,7577, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7578 39.955 552.0 474240.0 25 0 24103.0 28214 PQLPPRKLP 9 261 349.22205722447694 1044.6443422736309 3 349.2214538455009 MULTI CID FTMS 0 0 0 7571 190218.375 0.3416303979477216 10 -0.6563301086425781 7 Unmodified _PQLPPRKLP_ ENSG00000177034|ENST00000512528|MTX3;nc|ENSG00000177034|Q5HYI7-5|MTX3 15.248480904072842 0.4239247793462406 3 {I|L}PQPP 5 6 30.744 0.0 0.0 2.943 0.0 0.0 0.0 509.3201626624706 509.3201626624706 21.411866397379058 0.0 0.0 0.0 0 0.0242275032520141 0.5228787452803376 0.0 0.3054621874040891 {I|L}PQPP 2.943 - 429 + 1 1.649 216059.0 1.0 2442 5134 7571 HBL1_DMSO_200M_050219_1,7578 HBL1_DMSO_200M_050219_1,7578,PQLPPRKLP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7580 39.963 207.0 455430.0 25 0 61528.0 + 13634 HPRTSITV 8 123 455.7582007711707 909.5018486091416 2 455.7583495974541 MULTI CID FTMS 0 0 0 7579 421991.84375 0.0764136331346782 10 -0.6946525573730469 1 Unmodified _HPRTSITV_ ENSG00000077348|ENST00000221233|EXOSC5;ENST00000593523.1_1_19:41897706-41903233:-|nuORF 30.63653989081413 0.3996269429323407 3 {I|L}TV 3 5 33.377 0.0 0.0 3.6698 0.0 0.0 578.295702049025 0.0 578.295702049025 0.0 20.867945786753857 0.0 0.0 0 0.7887254899964358 0.0 0.3807196863200844 0.0 + {I|L}TV 3.6698 + + 144 1 1.633 78397.3 1.0 2443 5135 7579 HBL1_DMSO_200M_050219_1,7580 HBL1_DMSO_200M_050219_1,7580,HPRTSITV False True HPRTSITV 39.962503 455.758349597454 24263290.0 7579.0 ENST00000593523.1_1_19:41897706-41903233:-|nuORF;;ENSG00000077348|ENST00000221233|EXOSC5 2.0241015603144965 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7581 39.965 101.0 828480.0 25 0 95144.0 + 24265 MAPPPPRSV 9 73 476.2574249361268 950.5002969390536 2 476.2576782107353 MULTI CID FTMS 0 0 0 7579 587491.125 0.0554648344333159 22 -1.3391075134277344 2 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 3 {[DS]|[MA]|[CV]|TT}PPP 5 4 48.328 0.0 0.0 5.0845 0.0 0.0 0.0 454.2438674294269 454.2438674294269 37.94912767455475 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + {[DS]|[MA]|[CV]|TT}PPP 5.0845 + + 55 + 1 1.633 69333.4 1.0 2444 5135 7579 HBL1_DMSO_200M_050219_1,7581 HBL1_DMSO_200M_050219_1,7581,MAPPPPRSV False True MAPPPPRSV 39.964669 476.257678210735 1494310608.0 7579.0 ENSG00000105879|ENST00000440859|CBLL1;;nc|ENSG00000105879|Q75N03-2|CBLL1 7.274850050608317 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7582 39.966 40.0 1613300.0 25 0 411110.0 39761 VELQTLLTN 9 91 515.7926885501618 1029.5708241671234 2 515.7924682497978 MULTI CID FTMS 0 0 0 7579 838011.875 0.8090187172830389 -1 0.0537071228027343 3 Unmodified _VELQTLLTN_ ENSG00000198795|ENST00000361524|ZNF521 9.38312468134398 0.5871240394367778 3 [MT]G 3 8 16.655 0.0 0.0 1.6177 0.0 0.0 0.0 737.4407331849546 737.4407331849546 2.676062401770313 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [MT]G 1.6177 - 46 1 1.633 57732.0 1.0 2445 5135 7579 HBL1_DMSO_200M_050219_1,7582 HBL1_DMSO_200M_050219_1,7582,VELQTLLTN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7583 39.968 76.0 685790.0 25 0 54363.0 + 4855 DGAPPPNQI 9 91 454.72708443755056 907.4396159419013 2 454.7266418337822 MULTI CID FTMS 0 0 0 7579 767892.0625 0.4311919789264604 17 -1.0794563293457031 4 Unmodified _DGAPPPNQI_ ENSG00000184007|ENST00000647444|PTP4A2;ENST00000532001.6_1_1:32374455-32378590:-|nuORF;nc|ENSG00000184007|Q12974-3|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2 40.23920728925047 0.0741434193262949 3 [DG]APP{I|L} 6 3 38.875 0.0 0.0 4.2841 0.0 0.0 0.0 354.14259380738866 354.14259380738866 24.296279969868483 0.0 0.0 0.0 0 1.25 1.0 0.0 0.0 [DG]APP{I|L} 4.2841 - 152 1 1.633 44967.1 1.0 2446 5135 7579 HBL1_DMSO_200M_050219_1,7583 HBL1_DMSO_200M_050219_1,7583,DGAPPPNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7584 39.971 151.0 1029300.0 25 0 109570.0 + 40459 VILRDSHGV 9 141 332.52553646669014 994.5547800002704 3 332.5251647830009 MULTI CID FTMS 0 0 0 7579 571782.375 0.4793882580840835 -2 0.07550048828125 5 Unmodified _VILRDSHGV_ ENSG00000110700|ENST00000525634|RPS13;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000531908.5_1_11:17095982-17097186:-|nuORF 17.44264345198275 0.3645313841742926 3 V{I|L}VE 4 7 47.083 0.0 0.0 4.7341 0.0 0.0 0.0 551.2702120416624 551.2702120416624 33.55256041020407 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 V{I|L}VE 4.7341 - 387 + 1 1.633 127939.5 1.0 2447 5135 7579 HBL1_DMSO_200M_050219_1,7584 HBL1_DMSO_200M_050219_1,7584,VILRDSHGV False True VILRDSHGV 39.970598 332.525164783001 6352185.5 7579.0 ENSG00000110700|ENST00000525634|RPS13;;ENST00000531908.5_1_11:17095982-17097186:-|nuORF;;ENST00000526895.5_1_11:17095982-17099246:-|nuORF 6.839366277058919 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7585 39.977 373.0 475570.0 25 0 21862.0 -1 IRCNGLMMNAF 11 133 663.8068737392693 1325.5991945453386 2 663.8068115115166 MULTI CID FTMS 0 0 0 7579 485186.125 0.5997422561142324 -1 0.0537071228027343 6 Carbamidomethyl (C) _IRC(Carbamidomethyl (C))NGLMMNAF_ ENSG00000058335|ENST00000558480|RASGRF1;ENST00000560334.5_1_15:79271198-79356973:-|nuORF;nc|ENSG00000058335|Q13972|RASGRF1 29.081581746732265 0.4093582134107448 3 {[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F} 13 -1 + 115.26 0.0 0.0 8.6948 8.6948 93.23 0.0 0.0 0.0 11.461280356782368 16.642078980768062 11.461280356782368 9.072459467631006 0 1.341129063296272 1.5228787452803376 0.3494850021680094 2.2658715643802765 {[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}A[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QQNA{M(Oxidation (M))|F};[AG]NA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};[AG]GQ{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};[AG]GGA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F} 8.6948;8.0104;8.0104;8.0104;8.0076;7.9633;7.9301;7.8302;7.5998;7.5851 -;-;-;-;-;-;-;-;-;- 5111 1 1.633 130340.8 1.0 2448 5135 7579 HBL1_DMSO_200M_050219_1,7585 HBL1_DMSO_200M_050219_1,7585,IRCNGLMMNAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7586 39.981 180.0 663200.0 25 0 76512.0 + 45222 YRDDLKKL 8 93 350.8690906286932 0 350.8689758181572 PEAK CID FTMS 0 0 0 7579 456321.21875 0.775782810039698 -1 0.0537071228027343 7 Unmodified _YRDDLKKL_ ENSG00000143546|ENST00000368733|S100A8 56.17704186161178 0.0706261555734645 3 {I|L}KK 3 5 14.838 0.0 0.0 2.1205 0.0 0.0 199.35468975332128 128.07212244205314 327.4268121953744 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4916440611282626 + {I|L}KK 2.1205 + + 37 + 1 1.633 102160.9 1.0 2449 5135 7579 HBL1_DMSO_200M_050219_1,7586 HBL1_DMSO_200M_050219_1,7586,YRDDLKKL True True YRDDLKKL 39.9808 350.868975818157 3007476.75 7579.0 ENSG00000143546|ENST00000368733|S100A8 5.732723395029704 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7587 39.989 436.0 532650.0 25 0 83017.0 -1 GTGCDNMTCI 10 176 544.1951057232806 1086.375658513361 2 544.1956054568291 MULTI CID FTMS 0 0 0 7579 305530.8125 0.041967477660753 14 -0.8553810119628906 8 Carbamidomethyl (C),Oxidation (M) _GTGC(Carbamidomethyl (C))DNM(Oxidation (M))TCI_ ENSG00000115241|ENST00000344034|PPM1G;ENST00000472077.1_1_2:27604468-27607956:-|nuORF 5.731851221503515 0.7001233259664787 3 [NP]SKVQ{I|L}Y 8 -1 25.894 0.0 0.0 2.3835 0.0 0.0 0.0 153.85394836310857 153.85394836310857 3.407102324947516 0.0 0.0 0.0 0 0.0 0.0 1.079689690656103 0.6203715150305281 [NP]SKVQ{I|L}Y 2.3835 - 775 1 1.633 174392.7 1.0 2450 5135 7579 HBL1_DMSO_200M_050219_1,7587 HBL1_DMSO_200M_050219_1,7587,GTGCDNMTCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7588 39.998 565.0 821680.0 25 0 85241.0 + 16490 KALETLRRV 9 266 362.56421019918446 1084.6708011977537 3 362.5639526247978 MULTI CID FTMS 0 0 0 7579 256243.671875 0.3307120462659833 -2 0.07550048828125 9 Unmodified _KALETLRRV_ ENSG00000143384|ENST00000369026|MCL1;nc|ENSG00000143384|Q07820-2|MCL1 22.774965066869 0.2414061210083823 3 KVA{I|L}E 5 6 43.104 0.0 0.0 3.9739 0.0 0.0 0.0 541.3211820028002 541.3211820028002 22.838549028983834 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.6109243748081782 0.0 KVA{I|L}E 3.9739 - 489 + 1 1.633 366551.5 1.0 2451 5135 7579 HBL1_DMSO_200M_050219_1,7588 HBL1_DMSO_200M_050219_1,7588,KALETLRRV False True KALETLRRV 39.998473 362.563952624798 3654497.5 7579.0 ENSG00000143384|ENST00000369026|MCL1;;nc|ENSG00000143384|Q07820-2|MCL1 3.223097244898478 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7589 40.009 630.0 204470.0 25 0 7243.4 7684 EKPYACSYCA 10 169 378.8240175393456 1133.4502232182367 3 378.8232910037041 MULTI CID FTMS 0 0 0 7579 186172.75 0.9661246582801116 1 -0.0633430480957031 10 Unmodified _EKPYACSYCA_ ENSG00000236609|ENST00000457543|ZNF853 13.042465956692816 0.6287021003332052 3 [EP]YKA 5 6 32.166 0.0 0.0 2.8379 0.0 0.0 0.0 542.1352567477867 542.1352567477867 19.06681865368853 0.0 0.0 0.0 0 0.3252574989159953 1.2218487496163564 0.2742275032520141 0.6505149978319906 [EP]YKA 2.8379 - 231 1 1.633 105492.9 1.0 2452 5135 7579 HBL1_DMSO_200M_050219_1,7589 HBL1_DMSO_200M_050219_1,7589,EKPYACSYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7590 40.018 512.0 266700.0 25 0 27213.0 + 45823 YYPDGHNDY 9 124 572.2219709916787 1142.4293890501574 2 572.2218505740166 MULTI CID FTMS 0 0 0 7579 192174.703125 0.9063145815167456 -7 0.1827583312988281 11 Unmodified _YYPDGHNDY_ ENSG00000141380|ENST00000415083|SS18 39.94969957227396 0.0757326808254658 3 YYPDEMNDP 9 3 + 49.746 0.0 0.0 4.3544 4.3544 80.472 0.0 0.0 0.0 26.52470433689441 7.697213786774448 7.697213786774448 7.729725688156321 0 0.5484550065040282 2.0 0.3807196863200844 0.805462187404089 YYPDEMNDP;YYPDGH[DN]Y;YYPDDC(Carbamidomethyl (C))VDP;YYPDEMYY;YYPDMEYY;YYPDE[EC]QP;YYPDMDDQP;YYYDQ[DN]Y;YYPDG[WM]DP;YYPDDC(Carbamidomethyl (C))DVP 4.3544;3.6778;3.5908;3.5797;3.5211;3.4333;3.3747;3.2748;3.2152;3.1732 -;+;-;-;-;-;-;-;-;- + 471 + 1 1.633 104814.4 1.0 2453 5135 7579 HBL1_DMSO_200M_050219_1,7590 HBL1_DMSO_200M_050219_1,7590,YYPDGHNDY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7592 40.023 50.0 960510.0 25 0 73894.0 + -1 DAPMTPKQI 9 81 508.75723967225866 1015.4999264113172 2 508.7568237185478 MULTI CID FTMS 0 0 0 7591 862480.0 0.7870692250279673 5 -0.2728729248046875 1 Oxidation (M) _DAPM(Oxidation (M))TPKQI_ ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1;ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant 39.94969957227396 0.0757326808254658 3 {[DA]|[EG]}P{M(Oxidation (M))|F}TPKQ{I|L} 9 -1 + 60.817 0.0 0.0 5.9889 5.9889 89.346 0.0 0.0 0.0 45.12578788640525 16.43175948177209 16.43175948177209 12.26280941356464 0 0.3494850021680094 2.0 0.0 0.7302046884880937 {[DA]|[EG]}P{M(Oxidation (M))|F}TPKQ{I|L};{[DA]|[EG]}P{M(Oxidation (M))|F}TPK[AG]{I|L} 5.9889;4.7813 +;- + 120 + 1 1.634 43412.0 1.0 2454 5136 7591 HBL1_DMSO_200M_050219_1,7592 HBL1_DMSO_200M_050219_1,7592,DAPMTPKQI False False DAPMTPKQI 40.023229 508.756823718548 38297799.0 7591.0 ENSG00000171456|ENST00000375687|ASXL1;;nc|ENSG00000171456|Q8IXJ9-2|ASXL1;;ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant 7.786507924397786 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7593 40.025 81.0 533320.0 25 0 53273.0 + 36276 SYGPRAEEY 9 82 536.2403325603341 1070.466112187468 2 536.2404662966728 MULTI CID FTMS 0 0 0 7591 335504.65625 0.2079888501235633 5 -0.2728729248046875 2 Unmodified _SYGPRAEEY_ ENSG00000141522|ENST00000269321|ARHGDIA 21.53697664764585 0.2571576504437394 3 AHY 3 7 30.005 0.0 0.0 2.803 0.0 0.0 681.2938709943375 0.0 681.2938709943375 0.0 17.800084529637985 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 AHY 2.803 - 95 1 1.634 40921.4 1.0 2455 5136 7591 HBL1_DMSO_200M_050219_1,7593 HBL1_DMSO_200M_050219_1,7593,SYGPRAEEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7594 40.027 83.0 1096600.0 25 0 158890.0 + 34321 SLSCCDGF 8 92 416.1535730344686 830.2925931357372 2 416.1538268923759 MULTI CID FTMS 0 0 0 7591 738443.4375 0.223617543678221 -4 0.1596565246582031 3 Unmodified _SLSCCDGF_ REV__ENSG00000143669|ENST00000389793|LYST;REV__ENST00000465349.5_1_1:235954948-235996891:-|nuORF;REV__ENST00000489585.5_1_1:235926109-235996891:-|nuORF;REV__nc|ENSG00000143669|Q99698-2|LYST;REV__nc|ENSG00000143669|Q99698-3|LYST 5.760428011301431 0.7893668129297577 3 {[QS]|[NT]}VT 4 -1 19.133 0.0 0.0 2.3044 0.0 0.0 0.0 412.0663856122428 412.0663856122428 6.658948439557051 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.5283773187068795 0.3494850021680094 {[QS]|[NT]}VT 2.3044 - 51 1 1.634 79734.8 1.0 2456 5136 7591 HBL1_DMSO_200M_050219_1,7594 HBL1_DMSO_200M_050219_1,7594,SLSCCDGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7595 40.028 57.0 775640.0 25 0 83617.0 + 29847 QQNDQFQKV 9 81 567.7795964699686 1133.5446400067372 2 567.7800170779228 MULTI CID FTMS 0 0 0 7591 610220.9375 1.0 0 0.0 4 Unmodified _QQNDQFQKV_ ENSG00000134759|ENST00000358232|ELP2;ENST00000536373.5_1_18:33718798-33725056:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2 13.042465956692816 0.4836390050082244 3 Y 1 9 16.99 0.0 0.0 1.4988 0.0 0.0 952.4704192809544 0.0 952.4704192809544 0.0 1.488255516215915 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4988 - 259 + 1 1.634 40762.6 1.0 2457 5136 7591 HBL1_DMSO_200M_050219_1,7595 HBL1_DMSO_200M_050219_1,7595,QQNDQFQKV False True QQNDQFQKV 40.028388 567.7816 3675583.25 7591.0 nc|ENSG00000134759|Q6IA86-3|ELP2;;nc|ENSG00000134759|Q6IA86-4|ELP2;;nc|ENSG00000134759|Q6IA86-5|ELP2;;ENST00000536373.5_1_18:33718798-33725056:+|nuORF;;ENSG00000134759|ENST00000358232|ELP2;;nc|ENSG00000134759|Q6IA86-6|ELP2;;nc|ENSG00000134759|Q6IA86-2|ELP2 0.7041543324788412 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7596 40.034 317.0 225710.0 25 0 20787.0 28417 PSVDLEMI 8 104 452.229340179545 902.44412742589 2 452.2302429080009 MULTI CID FTMS 0 0 0 7591 184016.4375 0.7499441221820864 -1 0.0633430480957031 5 Unmodified _PSVDLEMI_ ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1 9.347437153973935 0.7675937258251505 3 DT[WK]A{I|L} 6 7 22.625 0.0 0.0 2.507 0.0 0.0 170.06705032689734 0.0 170.06705032689734 0.0 2.1484156871629523 0.0 0.0 0 0.5 0.0 0.0 0.0 DT[WK]A{I|L} 2.507 - 152 + 1 1.634 59140.6 1.0 2458 5136 7591 HBL1_DMSO_200M_050219_1,7596 HBL1_DMSO_200M_050219_1,7596,PSVDLEMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7597 40.047 756.0 279400.0 25 0 19391.0 + 34815 SQFGTVEKA 9 172 483.74774168922806 0 483.7476684451103 PEAK CID FTMS 0 0 0 7591 163920.21875 0.6328341387155563 -2 0.1170501708984375 6 Unmodified _SQFGTVEKA_ ENSG00000177733|ENST00000314940|HNRNPA0 70.33199760932243 0.0162606847128886 3 {M(Oxidation (M))|F}GTVE{I|L} 6 4 31.151 0.0 0.0 3.2265 0.0 0.0 215.0895152819768 101.03618799381093 316.12570327578766 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 1.1549471895720984 0.0 {M(Oxidation (M))|F}GTVE{I|L} 3.2265 - 192 + 1 1.634 162403.7 1.0 2459 5136 7591 HBL1_DMSO_200M_050219_1,7597 HBL1_DMSO_200M_050219_1,7597,SQFGTVEKA True True SQFGTVEKA 40.047229 483.74766844511 1307866.75 7591.0 ENSG00000177733|ENST00000314940|HNRNPA0 4.570043563842773 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7598 40.061 800.0 178550.0 25 0 10753.0 -1 0 99 870.60995444409 4348.01338988745 5 871.2134277224541 MULTI CID FTMS 0 0 0 7591 160196.03125 1.0 0 0.0 7 3 ASA[C(Carbamidomethyl (C))H]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 7 -1 36.739 0.0 0.0 0.84495 0.0 0.0 3543.687374045577 0.0 3543.687374045577 0.0 20.540681998460567 0.0 0.0 0 1.774227503252014 0.0 0.0 0.0 ASA[C(Carbamidomethyl (C))H]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 0.84495 - 80 1 1.634 103020.3 0.8999999761581421 2460 5136 7591 HBL1_DMSO_200M_050219_1,7598 HBL1_DMSO_200M_050219_1,7598, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7600 40.065 3.6 13774000.0 25 0 3238900.0 + 5045 DGYEQAARV 9 65 504.7401092137372 1007.4656654942744 2 504.7408630251884 MULTI CID FTMS 0 0 0 7599 14882610.0 0.0267442879331383 12 -0.7494125366210938 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 32.78568957990786 0.1150597335874693 3 [DG]YEQAA[RV] 9 0 + 60.148 0.0 0.0 5.9703 5.9703 87.679 0.0 0.0 0.0 38.49282585992687 5.642492736872597 5.642492736872597 9.208187539523747 0 0.6643943297944485 0.958607314841775 0.4247425010840047 0.3807196863200844 + + [DG]YEQAA[RV];[DG]YE[AG]AA[RV];[DG]YEV[NG][RV];[DG]YV[DN]A[RV];[DG]YVE[NG][RV] 5.9703;5.0563;4.1091;4.054;3.7552 +;-;-;-;- + 109 + 1 1.634 40828.2 1.0 2461 5137 7599 HBL1_DMSO_200M_050219_1,7600 HBL1_DMSO_200M_050219_1,7600,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7601 40.067 51.0 593230.0 25 0 49387.0 38562 TSVPASGAHQP 11 67 526.2607786892623 1050.5070044453246 2 526.2611572146416 MULTI CID FTMS 0 0 0 7599 810898.125 0.1830952964789128 4 -0.2302474975585937 2 Unmodified _TSVPASGAHQP_ ENSG00000105063|ENST00000412770|PPP6R1 8.745405648335112 0.8338865417133445 3 A 1 10 6.9897 0.0 0.0 0.66536 0.0 0.0 595.2711778845809 381.1785982721313 976.4497761567122 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.66536 + + 27 + 1 1.634 28330.4 1.0 2462 5137 7599 HBL1_DMSO_200M_050219_1,7601 HBL1_DMSO_200M_050219_1,7601,TSVPASGAHQP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7602 40.068 51.0 1067400.0 25 0 131230.0 38015 TPAFFSQTPI 10 87 554.7884688525165 1107.562384771833 2 554.7886840701103 MULTI CID FTMS 0 0 0 7599 1190248.125 0.9933448295287396 -1 0.0426254272460937 3 Unmodified _TPAFFSQTPI_ ENSG00000158711|ENST00000357992|ELK4 17.44264345198275 0.5548713957087773 3 TP{M(Oxidation (M))|F}K 4 7 38.876 0.0 0.0 3.5101 0.0 0.0 0.0 631.3138521783811 631.3138521783811 11.22486274231747 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 TP{M(Oxidation (M))|F}K 3.5101 - 126 + 1 1.634 47453.0 1.0 2463 5137 7599 HBL1_DMSO_200M_050219_1,7602 HBL1_DMSO_200M_050219_1,7602,TPAFFSQTPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7603 40.069 49.0 920800.0 25 0 120500.0 -1 TDLYSDCL 8 73 493.7100891047425 985.4056252762848 2 493.7103759646416 MULTI CID FTMS 0 0 0 7599 1160329.375 0.7813266611714368 -1 0.0426254272460937 4 Carbamidomethyl (C) _TDLYSDC(Carbamidomethyl (C))L_ ENSG00000134815|ENST00000328771|DHX34;ENST00000486327.6_1_19:47884337-47884637:+|nuORF 14.581692164780916 0.6954967302934248 3 [YV]QE 4 -1 23.02 0.0 0.0 2.3361 0.0 0.0 0.0 463.1511446456787 463.1511446456787 6.030768805449185 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YV]QE 2.3361 - 159 1 1.634 39770.3 1.0 2464 5137 7599 HBL1_DMSO_200M_050219_1,7603 HBL1_DMSO_200M_050219_1,7603,TDLYSDCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7604 40.072 105.0 1093700.0 25 0 173770.0 -1 0 126 448.2749137367906 447.2676372701906 1 448.2748290896416 MULTI CID FTMS 0 0 0 7599 842435.375 0.3338839538420061 -4 0.1814689636230468 5 3 V 1 -1 9.1487 0.0 0.0 2.0455 0.0 0.0 330.1883811440172 0.0 330.1883811440172 0.0 7.889631558056216 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.0455 - 16 + 1 1.634 91169.1 1.0 2465 5137 7599 HBL1_DMSO_200M_050219_1,7604 HBL1_DMSO_200M_050219_1,7604, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7605 40.073 69.0 1009200.0 25 0 106990.0 + 45055 YPYGDGNRSV 10 54 564.2590411024025 1126.503529271605 2 564.2592651247978 MULTI CID FTMS 0 0 0 7599 831307.5625 0.0930167119176787 -4 0.1814689636230468 6 Unmodified _YPYGDGNRSV_ ENSG00000156735|ENST00000287322|BAG4;ENST00000531211.1_1_8:70772071-70772629:-|nuORF;nc|ENSG00000156735|O95429-2|BAG4 29.84058131909904 0.2982332456971691 3 YPYGD 5 5 69.706 0.0 0.0 6.1878 0.0 0.0 0.0 528.253358891511 528.253358891511 62.71652514092061 0.0 0.0 0.0 0 1.174742501084005 2.0 0.0 0.0 + YPYGD 6.1878 + + 93 + 1 1.634 60010.5 1.0 2466 5137 7599 HBL1_DMSO_200M_050219_1,7605 HBL1_DMSO_200M_050219_1,7605,YPYGDGNRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7606 40.075 84.0 797960.0 25 0 152520.0 -1 0 79 337.6787729253828 673.3429929175655 2 337.6786376833916 MULTI CID FTMS 0 0 0 7599 597571.875 0.8853764332622216 4 -0.2302474975585937 7 3 {[VA]|[{I|L}G]}PYPQ 6 -1 + 62.995 0.0 0.0 9.3555 9.3555 99.115 0.0 0.0 0.0 24.973024840566467 15.727277393423975 15.727277393423975 62.99471895720984 0 0.7302046884880937 2.0 0.0 0.6307196863200843 {[VA]|[{I|L}G]}PYPQ 9.3555 - 70 + 1 1.634 58427.8 1.0 2467 5137 7599 HBL1_DMSO_200M_050219_1,7606 HBL1_DMSO_200M_050219_1,7606, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7607 40.079 191.0 576620.0 25 0 40102.0 + 10657 FVQLCPYKGQG 11 113 620.3132969374445 1238.612040941689 2 620.3132202029228 MULTI CID FTMS 0 0 0 7599 584799.5 0.6357705350735773 4 -0.2302474975585937 8 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 3 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 81.659 11.427 2.8842 6.5928 6.5928 60.914 0.0 0.0 0.0 0.0 58.30393549503025 0.0 0.0 0 2.774227503252014 0.0 0.0 1.9071406706489744 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 6.5928 - 3676 + 1 1.634 85380.6 1.0 2468 5137 7599 HBL1_DMSO_200M_050219_1,7607 HBL1_DMSO_200M_050219_1,7607,FVQLCPYKGQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7608 40.083 208.0 395210.0 25 0 95206.0 -1 0 114 395.2275566091538 394.2202801425538 1 395.2275573611259 MULTI CID FTMS 0 0 0 7599 520659.09375 0.4033309322270234 -4 0.1814689636230468 9 3 {I|L} 1 -1 12.474 0.0 0.0 3.1643 0.0 0.0 263.1253379812241 0.0 263.1253379812241 0.0 4.186363512511502 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.1643 - 13 + 1 1.634 68145.5 1.0 2469 5137 7599 HBL1_DMSO_200M_050219_1,7608 HBL1_DMSO_200M_050219_1,7608, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7609 40.087 218.0 413640.0 25 0 20580.0 + 30288 QYQAAKSVM 9 126 513.2573307930389 0 513.2557861208916 PEAK CID FTMS 0 0 0 7599 304200.84375 1.0 0 0.0 10 Unmodified _QYQAAKSVM_ ENSG00000116127|ENST00000613296|ALMS1;nc|ENSG00000116127|Q8TCU4-2|ALMS1;nc|ENSG00000116127|Q8TCU4-3|ALMS1 24.020572477871973 0.1646235280836931 3 Q 1 8 6.5938 0.0 0.0 0.64361 0.0 0.0 761.3730772581497 132.04580103092033 893.41887828907 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 + Q 0.64361 + + 291 + 1 1.634 75873.3 1.0 2470 5137 7599 HBL1_DMSO_200M_050219_1,7609 HBL1_DMSO_200M_050219_1,7609,QYQAAKSVM False True QYQAAKSVM 40.086962 513.255786120892 2745670.5 7599.0 ENSG00000116127|ENST00000613296|ALMS1;;nc|ENSG00000116127|Q8TCU4-2|ALMS1;;nc|ENSG00000116127|Q8TCU4-3|ALMS1 6.273877779642741 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7610 40.099 718.0 323280.0 25 0 22204.0 34781 SQDLEFTLH 9 215 545.2618710860382 1088.5091892388764 2 545.2621337771416 MULTI CID FTMS 0 0 0 7599 242110.0625 0.5636426189289824 -1 0.0426254272460937 11 Unmodified _SQDLEFTLH_ ENSG00000132825|ENST00000370996|PPP1R3D 58.6788170122104 0.0268135626297836 3 {[QS]|[NT]}DEVREN{I|L} 9 6 + 54.218 0.0 0.0 4.981 4.981 84.272 0.0 0.0 0.0 17.390690719683086 18.4725070124678 17.390690719683086 9.208187539523747 0 2.221848749616356 1.3979400086720375 0.2887254899964357 0.805462187404089 {[QS]|[NT]}DEVREN{I|L};{[QS]|[NT]}DEVREGG{I|L};{[QS]|[NT]}{[QG]|[NA]}VEN{I|L}QS;{[QS]|[NT]}{[QG]|[NA]}VQD{I|L}QS;{[QS]|[NT]}{[QG]|[NA]}VQ{I|L}DQS;[AG]SDEVREN{I|L};{[QS]|[NT]}{[QG]|[NA]}VENTN{I|L};{[QS]|[NT]}{[QG]|[NA]}VQDTN{I|L};{[QS]|[NT]}{[QG]|[NA]}VQSEN{I|L};{[QS]|[NT]}{[QG]|[NA]}VEN{I|L}[AG]S 4.981;4.135;3.3396;3.2506;3.1779;3.0305;2.9212;2.8322;2.7594;2.4977 -;-;-;-;-;-;-;-;-;- 2281 1 1.634 174642.6 1.0 2471 5137 7599 HBL1_DMSO_200M_050219_1,7610 HBL1_DMSO_200M_050219_1,7610,SQDLEFTLH True False SQDEVRENI 40.099427 545.262133777142 5867925.0 7599.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 4.994118690490723 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7611 40.112 735.0 235620.0 25 0 33800.0 + 45149 YQDTSKYNV 9 190 559.2620109279701 1116.50946892274 2 559.2617675662041 MULTI CID FTMS 0 0 0 7599 228377.203125 0.8092499096412759 -1 0.0426254272460937 12 Unmodified _YQDTSKYNV_ ENSG00000119953|ENST00000369603|SMNDC1 51.629811660486645 0.0367964933207742 3 [YQ]R{M(Oxidation (M))|F}NVQY 8 7 + 49.021 0.0 0.0 4.3906 4.3906 80.394 0.0 0.0 0.0 7.480943963257516 5.344858742902616 5.344858742902616 7.480943963257516 0 0.6989700043360187 1.0 0.0 0.6861818737241735 [YQ]R{M(Oxidation (M))|F}NVQY;[KS]TDYNVQY;[YQ]R{M(Oxidation (M))|F}GGVQY;[YQ]R{M(Oxidation (M))|F}NV[AG]Y;[KS]TYDNVQY;[YQ]D{[VA]|[{I|L}G]}Q[KC]Y;[YQ]D{[VA]|[{I|L}G]}[KC]QY;[KS]TDYGGVQY;[KS]TDYNV[AG]Y;[YQ]D{[VA]|[{I|L}G]}QY[KC] 4.3906;3.7205;3.561;3.561;3.3476;3.1873;3.1084;2.8958;2.8958;2.8308 -;-;-;-;-;-;-;-;-;- 4505 1 1.634 132416.3 1.0 2472 5137 7599 HBL1_DMSO_200M_050219_1,7611 HBL1_DMSO_200M_050219_1,7611,YQDTSKYNV True True YQDTSKYNV 40.112196 559.261767566204 1575519.375 7599.0 ENSG00000119953|ENST00000369603|SMNDC1 5.389763355255127 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7612 40.126 800.0 225120.0 25 0 34816.0 + 16 AAAGVVHAV 9 165 397.7292537734593 793.4439546137186 2 397.7292663455009 MULTI CID FTMS 0 0 0 7599 159045.015625 0.8662631944132988 -1 0.0426254272460937 13 Unmodified _AAAGVVHAV_ ENSG00000135925|ENST00000258411|WNT10A 56.04830969593885 0.0282699710924866 3 AAAGVVHAV 9 0 + 52.054 0.0 0.0 6.5605 6.5605 77.915 0.0 0.0 0.0 13.91307052070637 0.3218468337140123 0.3218468337140123 0.3218468337140123 0 1.3684151806525389 2.0 0.0 0.0 + + AAAGVVHAV;AAAGVVHG{I|L};AAARVHAV;AAARVHG{I|L};AAAGVVVAH;AAARVVAH;AAQVVHAV;AAQVVHG{I|L};AAQVVVAH;AAA[{I|L}A]AHAV 6.5605;6.5199;6.1389;6.0983;6.0668;5.6452;5.3984;5.3578;4.9047;4.8446 +;-;-;-;-;-;-;-;-;- + 442 + 1 1.634 140793.0 0.7400000095367432 2473 5137 7599 HBL1_DMSO_200M_050219_1,7612 HBL1_DMSO_200M_050219_1,7612,AAAGVVHAV True True AAAGVVHAV 40.12601 397.729266345501 1012842.3125 7599.0 ENSG00000135925|ENST00000258411|WNT10A 5.821157455444336 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7614 40.13 20.0 3511600.0 25 0 790080.0 + 28263 PRFTPKRE 8 62 344.1976176394237 1029.571023518471 3 344.1974975466728 MULTI CID FTMS 0 0 0 7613 2746484.0 0.7070060160860573 1 -0.0499191284179687 1 Unmodified _PRFTPKRE_ ENST00000537236.2_1_12:110006587-110011320:-|nuORF 13.042465956692816 0.7182358012947757 3 PTGPVE 6 5 27.58 0.0 0.0 2.6788 0.0 0.0 431.2502613751969 0.0 431.2502613751969 0.0 17.206225184280797 0.0 0.0 0 0.1549471895720985 0.0 0.0 0.0 PTGPVE 2.6788 - 43 1 1.634 65566.0 1.0 2474 5138 7613 HBL1_DMSO_200M_050219_1,7614 HBL1_DMSO_200M_050219_1,7614,PRFTPKRE False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7615 40.132 33.0 1334300.0 25 0 94110.0 + 32182 RVVDELDNQM 10 67 617.7893413485374 1233.5641297638747 2 617.7900268435478 MULTI CID FTMS 0 0 0 7613 1615429.375 0.5485698696499577 2 -0.1122779846191406 2 Oxidation (M) _RVVDELDNQM(Oxidation (M))_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 71.70789743142352 0.0188816056000227 3 [RV]VDE{I|L}DNQ{M(Oxidation (M))|F} 10 0 + 89.997 0.0 0.0 7.2957 7.2957 91.085 0.0 0.0 0.0 13.819006879220057 65.06244164733907 13.819006879220057 9.164539485499262 0 1.1989700043360187 1.154901959985743 0.4247425010840047 0.805462187404089 + + [RV]VDE{I|L}DNQ{M(Oxidation (M))|F};[RV]VDE{I|L}DGGQ{M(Oxidation (M))|F};[RV]VDE{I|L}DN[AG]{M(Oxidation (M))|F};[RV]VDE{I|L}DGG[AG]{M(Oxidation (M))|F} 7.2957;6.5528;6.5528;5.8128 +;-;-;- + 147 1 1.634 38719.9 1.0 2475 5138 7613 HBL1_DMSO_200M_050219_1,7615 HBL1_DMSO_200M_050219_1,7615,RVVDELDNQM True False RVVDELDNQM 40.131677 617.790026843548 34190588.0 7613.0 nc|ENSG00000085231|Q9Y3D8-2|AK6;;ENSG00000085231|ENST00000380822|AK6 9.595381736755373 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7616 40.133 66.0 818330.0 25 0 108090.0 + 4282 DARAGPSL 8 91 393.7085930836546 785.4026332341092 2 393.7086059451103 MULTI CID FTMS 0 0 0 7613 963146.1875 0.9497281316657846 -1 0.0650367736816406 3 Unmodified _DARAGPSL_ ENSG00000139146|ENST00000337682|SINHCAF 32.78568957990786 0.3549862272178655 3 {[QV]|[N{I|L}]|[RA]|[KV]}DQPS{I|L} 7 3 + 55.668 0.0 0.0 7.0879 7.0879 62.298 0.0 0.0 0.0 11.470544657224837 48.67850841065976 11.470544657224837 0.0 0 0.9517188504113846 0.9208187539523752 0.4247425010840047 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}DQPS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QDPS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DAGPS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[AG]DPS{I|L};{[QN]|[E{I|L}]|[KN]}{NN|[MP]|[D{I|L}]|[EV]}PS{I|L};[AG]{[QV]|[N{I|L}]|[RA]|[KV]}DPS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QS[DP]{I|L};[AG]{[RE]|[WV]}GPS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[AG]S[DP]{I|L};[AG]{[QV]|[N{I|L}]|[RA]|[KV]}S[DP]{I|L} 7.0879;7.0879;6.9132;5.8999;4.837;4.2208;3.8053;3.6133;2.6173;0.93822 -;-;-;-;-;-;-;-;-;- 162 1 1.634 47367.7 1.0 2476 5138 7613 HBL1_DMSO_200M_050219_1,7616 HBL1_DMSO_200M_050219_1,7616,DARAGPSL False True DARAGPSL 40.133249 393.70860594511 6991456.0 7613.0 ENSG00000139146|ENST00000337682|SINHCAF 4.03176482518514 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7617 40.135 63.0 1286500.0 25 0 175850.0 + 12880 GVYGDVHRV 9 85 334.5101971242272 1000.5087619728816 3 334.5098144412041 MULTI CID FTMS 0 0 0 7613 777989.8125 0.5861298153280793 -2 0.1076622009277343 4 Unmodified _GVYGDVHRV_ ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3;nc|ENSG00000119314|O95758|PTBP3 27.628801355627647 0.1796483985696185 3 [VG]YGDVH[RV] 9 0 + 69.627 0.0 0.0 6.9591 6.9591 86.12 0.0 0.0 0.0 21.97498719580942 10.413926851582254 10.413926851582254 4.771212547196626 0 0.3494850021680094 2.0 0.0 0.4247425010840047 + + [VG]YGDVH[RV];[VG]YGVDH[RV];[VG]VYGDH[RV];[VG]YVGDH[RV];[VG]YGDVV[RH];[VG]YGVDV[RH];[VG]VYGDV[RH];[VG]YVGDV[RH] 6.9591;6.4822;6.305;6.1814;5.9182;5.4414;5.2641;5.1405 +;-;-;-;-;-;-;- + 156 + 1 1.634 69356.1 1.0 2477 5138 7613 HBL1_DMSO_200M_050219_1,7617 HBL1_DMSO_200M_050219_1,7617,GVYGDVHRV False True GVYGDVHRV 40.134776 334.509814441204 14152139.0 7613.0 ENSG00000119314|ENST00000374257|PTBP3;;nc|ENSG00000119314|O95758-4|PTBP3;;nc|ENSG00000119314|O95758-1|PTBP3;;nc|ENSG00000119314|O95758-5|PTBP3;;nc|ENSG00000119314|O95758-7|PTBP3;;nc|ENSG00000119314|O95758|PTBP3;;nc|ENSG00000119314|O95758-2|PTBP3 9.068031787872314 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7618 40.138 148.0 371880.0 25 0 28572.0 -1 PVLCLGTL 8 98 436.7504500157082 871.4863470982165 2 436.7505676150322 MULTI CID FTMS 0 0 0 7613 408510.5625 1.0 0 0.0 5 Carbamidomethyl (C) _PVLC(Carbamidomethyl (C))LGTL_ ENSG00000148123|ENST00000374874|PLPPR1 20.871210003555333 0.6025813472596342 3 [RV]NVGNT{I|L} 8 -1 + 42.847 0.0 0.0 4.9166 4.9166 84.603 0.0 0.0 0.0 3.7794228098480858 27.36291666633033 3.7794228098480858 9.262137858390808 0 0.5 0.0 0.0 0.4896518287104437 [RV]NVGNT{I|L};[RV]GGVGNT{I|L};[RV]NVGGGT{I|L};[RV]GGVGGGT{I|L} 4.9166;3.8538;3.8538;2.7972 -;-;-;- 119 1 1.634 48650.7 1.0 2478 5138 7613 HBL1_DMSO_200M_050219_1,7618 HBL1_DMSO_200M_050219_1,7618,PVLCLGTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7619 40.141 159.0 340210.0 25 0 37984.0 + 312 ADVSLRNSV 9 100 480.7585518328315 959.502550732463 2 480.7586547732353 MULTI CID FTMS 0 0 0 7613 276180.84375 0.0239946186250425 10 -0.664154052734375 6 Unmodified _ADVSLRNSV_ ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085|ACACA 34.40172386719151 0.1061884637610825 3 WV{I|L}{[QS]|[NT]}AASV 9 6 + 43.696 0.0 0.0 4.5541 4.5541 85.134 0.0 0.0 0.0 19.188035395329123 4.527357396283406 4.527357396283406 15.37066963995872 0 1.5924778212679485 0.0 0.5709991640913001 0.0 WV{I|L}{[QS]|[NT]}AASV;WV{I|L}{[QS]|[NT]}[QT]V;{[DA]|[EG]}[R{I|L}][QT]ASV;[WR]H[Y{I|L}]SV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[{I|L}P]E{NN|[MP]|[D{I|L}]|[EV]};[WR][WK]ADV;{[VA]|[{I|L}G]}{[RE]|[WV]}[QT]ASV 4.5541;2.9521;1.7249;0.56466;0.51011;0.45829;0.15002 -;-;-;-;-;-;- 309 + 1 1.634 46764.7 1.0 2479 5138 7613 HBL1_DMSO_200M_050219_1,7619 HBL1_DMSO_200M_050219_1,7619,ADVSLRNSV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7620 40.144 190.0 311650.0 25 0 28311.0 + 28938 AVAQQVQQV 9 94 485.2705180910827 968.5264832489654 2 485.7699767947197 MULTI CID FTMS 0 0 0 7613 261774.0 0.6376913669483716 -4 0.2247123718261718 7 Unmodified _QAVGAGLSPLG_ nc|ENSG00000106459|Q16656-4|NRF1;nc|ENSG00000106459|Q16656-2|NRF1;ENSG00000106459|ENST00000393232|NRF1 26.268140514670165 0.4754186812857754 3 {[VA]|[{I|L}G]}GQAAV 7 8 49.028 0.0 0.0 5.0622 0.0 0.0 0.0 369.1720200684426 369.1720200684426 20.043869621537524 0.0 0.0 0.0 0 0.0 2.0 0.0 0.7302046884880937 {[VA]|[{I|L}G]}GQAAV 5.0622 - 932 1 1.634 50204.2 1.0 2480 5138 7613 HBL1_DMSO_200M_050219_1,7620 HBL1_DMSO_200M_050219_1,7620,QAVGAGLSPLG False False AVAQQVQQV 40.144491 485.76997679472 2971709.25 7613.0 nc|ENSG00000106459|Q16656-4|NRF1;;nc|ENSG00000106459|Q16656-2|NRF1;;ENSG00000106459|ENST00000393232|NRF1 4.735567490259807 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7621 40.148 205.0 436470.0 25 0 52629.0 -1 0 116 377.066764413127 0 377.0669128298759 PEAK CID FTMS 0 0 0 7613 243996.390625 1.0 0 0.0 8 3 V 1 -1 3.9794 0.0 0.0 0.52909 0.0 0.0 570.0132305090681 80.01484857730702 650.0280790863751 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.52909 - 16 + 1 1.634 74029.3 1.0 2481 5138 7613 HBL1_DMSO_200M_050219_1,7621 HBL1_DMSO_200M_050219_1,7621, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7622 40.162 800.0 101210.0 25 0 25242.0 -1 0 48 1120.7828647434646 3359.326764830594 3 1121.117114245892 MULTI CID FTMS 0 0 0 7613 100381.9609375 0.2002262767794203 -3 0.1710052490234375 9 3 E 1 -1 6.9897 0.0 0.0 0.20807 0.0 0.0 2703.100218968304 524.1630343072874 3227.2632532755915 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20807 - 24 + 1 1.634 72362.0 0.5199999809265137 2482 5138 7613 HBL1_DMSO_200M_050219_1,7622 HBL1_DMSO_200M_050219_1,7622, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7623 40.176 800.0 187250.0 25 0 22174.0 + + -1 HLIHEVTKV 9 182 538.237288240939 1074.460023548678 2 538.2360107302666 MULTI CID FTMS 0 0 0 7613 103901.734375 0.8646032306361091 2 -0.1122779846191406 10 Carbamidomethyl (C),Oxidation (M) _HIC(Carbamidomethyl (C))REM(Oxidation (M))VD_ nc|ENSG00000089597|Q14697-2|GANAB;ENST00000524437.5_1_11:62402291-62406896:-|nuORF;ENSG00000089597|ENST00000356638|GANAB 10.183394434864962 0.7604730176254005 3 Y 1 -1 15.485 0.0 0.0 1.4411 0.0 0.0 893.3859096344187 0.0 893.3859096344187 0.0 4.456853219085302 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4411 - 630 + 1 1.634 118284.8 0.7300000190734863 2483 5138 7613 HBL1_DMSO_200M_050219_1,7623 HBL1_DMSO_200M_050219_1,7623,HICREMVD False False HLIHEVTKV 40.176085 538.236010730267 574079.625 7613.0 nc|ENSG00000089597|Q14697-2|GANAB;;ENST00000524437.5_1_11:62402291-62406896:-|nuORF;;ENSG00000089597|ENST00000356638|GANAB -0.2134383916854858 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7625 40.18 20.0 2758500.0 25 0 638740.0 + 4245 DAPPSRVSV 9 50 464.2480315316318 926.4815101300636 2 464.2482482790947 MULTI CID FTMS 0 0 0 7624 2780353.25 0.8267634065104401 1 -0.0623588562011718 1 Unmodified _DAPPSRVSV_ ENSG00000180900|ENST00000356994|SCRIB;nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB 13.042465956692816 0.4836390050082244 3 {[DA]|[EG]}PP 4 5 40.445 0.0 0.0 4.3655 0.0 0.0 0.0 543.2885225885374 543.2885225885374 28.85151878060192 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[DA]|[EG]}PP 4.3655 + + 14 + 1 1.634 48812.3 1.0 2484 5139 7624 HBL1_DMSO_200M_050219_1,7625 HBL1_DMSO_200M_050219_1,7625,DAPPSRVSV False True DAPPSRVSV 40.180414 464.248248279095 136532416.0 7624.0 nc|ENSG00000180900|Q14160|SCRIB;;nc|ENSG00000180900|Q14160-2|SCRIB;;ENSG00000180900|ENST00000356994|SCRIB 5.640435377756755 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7626 40.182 39.0 1567200.0 25 0 234180.0 -1 PLHWVCKK 8 66 534.2943387729905 1066.574124612781 2 534.2941161990166 MULTI CID FTMS 0 0 0 7624 1118119.75 0.4198953697504735 8 -0.5737075805664062 2 Carbamidomethyl (C) _PLHWVC(Carbamidomethyl (C))KK_ ENSG00000139187|ENST00000356986|KLRG1;ENST00000538029.1_1_12:9102760-9162130:+|nuORF;nc|ENSG00000139187|Q96E93|KLRG1 20.871210003555333 0.6025813472596342 3 {I|L}PPEP 5 -1 62.206 0.0 0.0 5.8323 0.0 0.0 0.0 530.2755831354124 530.2755831354124 55.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPEP 5.8323 - 24 + 1 1.634 60083.7 1.0 2485 5139 7624 HBL1_DMSO_200M_050219_1,7626 HBL1_DMSO_200M_050219_1,7626,PLHWVCKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7627 40.183 46.0 1362500.0 25 0 186440.0 + 41549 VPPDTRNVV 9 72 498.7770266984527 995.5395004637054 2 498.7771789431572 MULTI CID FTMS 0 0 0 7624 1136967.125 0.7866344554643141 8 -0.5737075805664062 3 Unmodified _VPPDTRNVV_ ENSG00000275835|ENST00000615383|TUBGCP5;nc|ENSG00000275835|Q96RT8-2|TUBGCP5 17.11289562659939 0.3734572693229295 3 VPPD 4 5 56.186 0.0 0.0 5.6437 0.0 0.0 0.0 584.3162174717347 584.3162174717347 46.18562527100117 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VPPD 5.6437 + + 30 + 1 1.634 54251.9 1.0 2486 5139 7624 HBL1_DMSO_200M_050219_1,7627 HBL1_DMSO_200M_050219_1,7627,VPPDTRNVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7628 40.185 84.0 701400.0 25 0 75695.0 + 41796 VPVQPGSSV 9 96 435.2395483599104 868.4645437866208 2 435.2394286990166 MULTI CID FTMS 0 0 0 7624 550613.1875 0.559046686285967 -2 0.1149559020996093 4 Unmodified _VPVQPGSSV_ ENSG00000149476|ENST00000394900|TKFC;ENST00000524953.1_1_11:61110045-61110363:+|nuORF;nc|ENSG00000149476|Q3LXA3-2|TKFC 38.15118350030904 0.0856056900103839 3 [VP]QV 4 5 25.986 0.0 0.0 2.9922 0.0 0.0 0.0 442.1934959925593 442.1934959925593 8.67931555708239 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.0 0.0 [VP]QV 2.9922 - 69 1 1.634 51715.7 1.0 2487 5139 7624 HBL1_DMSO_200M_050219_1,7628 HBL1_DMSO_200M_050219_1,7628,VPVQPGSSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7629 40.198 777.0 266680.0 25 0 42819.0 + -1 GAYSCCYYD 9 184 579.6962530528273 1157.3779531724545 2 579.6961547732353 MULTI CID FTMS 0 0 0 7624 230950.203125 0.0601338430862186 -3 0.1575813293457031 5 2 Carbamidomethyl (C) _GAYSC(Carbamidomethyl (C))C(Carbamidomethyl (C))YYD_ REV__nc|ENSG00000211668|P01706|IGLV2-11 16.942295170755138 0.3780752226737986 3 QDYYY 5 -1 45.534 0.0 0.0 3.9342 0.0 0.0 407.0941944806656 0.0 407.0941944806656 0.0 30.58781036245681 0.0 0.0 0 0.4247425010840047 0.0 0.3054621874040891 1.1549471895720984 QDYYY 3.9342 - 718 1 1.634 154259.8 1.0 2488 5139 7624 HBL1_DMSO_200M_050219_1,7629 HBL1_DMSO_200M_050219_1,7629,GAYSCCYYD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7630 40.204 341.0 338500.0 25 0 28425.0 -1 YKCSVCPDY 9 142 567.7323350385341 1133.450117143868 2 567.7330810427666 MULTI CID FTMS 0 0 0 7624 221204.671875 0.147176642172952 5 -0.3816986083984375 6 Carbamidomethyl (C) _YKC(Carbamidomethyl (C))SVCPDY_ ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1 18.1463463914782 0.3454829746528889 3 [EP]AAYKA{M(Oxidation (M))|F} 8 -1 47.01 0.0 0.0 4.1475 0.0 0.0 0.0 252.99769950154305 252.99769950154305 25.798662665098604 0.0 0.0 0.0 0 0.5 0.744727494896694 0.9559771852360796 0.3054621874040891 [EP]AAYKA{M(Oxidation (M))|F} 4.1475 - 808 1 1.634 89461.3 1.0 2489 5139 7624 HBL1_DMSO_200M_050219_1,7630 HBL1_DMSO_200M_050219_1,7630,YKCSVCPDY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7631 40.211 354.0 157420.0 25 0 16877.0 + 44478 YNSENGPFPPY 11 84 642.7779334616218 1283.5413139900436 2 642.7794067263603 MULTI CID FTMS 0 0 0 7624 173477.03125 0.0746488859383972 13 -0.8585319519042969 7 Unmodified _YNSENGPFPPY_ REV__ENSG00000111834|ENST00000229554|RSPH4A;REV__nc|ENSG00000111834|Q5TD94-3|RSPH4A 5.296884461304476 0.8501568894076437 3 EQAARV 6 -1 29.104 0.0 0.0 2.2675 0.0 0.0 611.1858999112865 0.0 611.1858999112865 0.0 15.828127610301294 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.2742275032520141 EQAARV 2.2675 - 90 + 1 1.634 44942.3 1.0 2490 5139 7624 HBL1_DMSO_200M_050219_1,7631 HBL1_DMSO_200M_050219_1,7631,YNSENGPFPPY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7632 40.225 800.0 283150.0 25 0 31775.0 -1 0 119 904.915641577991 1807.8167302227816 2 904.9139892458916 MULTI CID FTMS 0 0 0 7624 146497.625 0.0407201368719103 11 -0.6804428100585938 8 3 {[QV]|[N{I|L}]|[RA]|[KV]}V{[CP]|[EA]}N{M(Oxidation (M))|F}V 8 -1 20.721 0.0 0.0 1.1462 0.0 0.0 0.0 918.3467954906132 918.3467954906132 10.888182858546164 0.0 0.0 0.0 0 0.0 0.7695510786217261 1.079689690656103 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V{[CP]|[EA]}N{M(Oxidation (M))|F}V 1.1462 - 733 1 1.634 154477.6 0.699999988079071 2491 5139 7624 HBL1_DMSO_200M_050219_1,7632 HBL1_DMSO_200M_050219_1,7632, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7633 40.238 800.0 135100.0 25 0 24064.0 + 14246 IEALEEPDIY 10 133 596.2924624998665 0 596.2921020388603 PEAK CID FTMS 0 0 0 7624 135306.984375 1.0 0 0.0 9 Unmodified _IEALEEPDIY_ REV__ENSG00000101470|ENST00000372555|TNNC2 15.847184025352805 0.3304572136216667 3 AT 2 -1 8.0951 0.0 0.0 0.67994 0.0 0.0 837.4123653300079 178.05137048892814 1015.463735818936 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 AT 0.67994 - 81 + 1 1.634 85780.0 0.8100000023841858 2492 5139 7624 HBL1_DMSO_200M_050219_1,7633 HBL1_DMSO_200M_050219_1,7633,IEALEEPDIY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7635 40.244 91.0 633260.0 25 0 59001.0 + 28567 PTRYRANR 8 83 517.2852603454791 0 517.2856323122978 PEAK CID FTMS 0 0 0 7634 620091.4375 0.8017919184827161 7 -0.5113487243652344 1 Unmodified _PTRYRANR_ REV__ENSG00000120899|ENST00000346049|PTK2B;REV__ENST00000397497.8_2_8:27288866-27309154:+|nuORF;REV__nc|ENSG00000120899|Q14289-2|PTK2B 4.75600775471527 0.5825752635465162 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.633 49819.2 1.0 2493 5140 7634 HBL1_DMSO_200M_050219_1,7635 HBL1_DMSO_200M_050219_1,7635,PTRYRANR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7636 40.246 128.0 691780.0 25 0 113340.0 + 24266 MAPPPPRSV 9 81 476.2574249361268 950.5002969390536 2 476.2576476931572 MULTI CID FTMS 0 0 0 7634 314115.34375 0.0296555212371214 27 -1.3553123474121094 2 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 3 {[DS]|[MA]|[CV]|TT}PPD 5 5 38.79 0.0 0.0 4.081 0.0 0.0 0.0 436.2567537897094 436.2567537897094 28.87506089914721 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {[DS]|[MA]|[CV]|TT}PPD 4.081 - 91 + 1 1.633 73882.2 1.0 2494 5140 7634 HBL1_DMSO_200M_050219_1,7636 HBL1_DMSO_200M_050219_1,7636,MAPPPPRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7637 40.248 42.0 1151400.0 25 0 117110.0 + 32618 SAYEQVKQV 9 92 526.2751397203231 1050.535726507446 2 526.2738525271416 MULTI CID FTMS 0 0 0 7634 702671.0625 0.4492878323550914 -2 0.1122779846191406 3 Unmodified _SAYEQVKQV_ ENSG00000054282|ENST00000366541|SDCCAG8;nc|ENSG00000054282|Q86SQ7-2|SDCCAG8;nc|ENSG00000054282|Q86SQ7-3|SDCCAG8;nc|ENSG00000054282|Q86SQ7-4|SDCCAG8 69.10491478415734 0.0214449631113747 3 {[SA]|[TG]}YEQVKQV 9 0 + 76.996 0.0 0.0 7.3292 7.3292 91.663 0.0 0.0 0.0 47.78811451181701 11.884454040515834 11.884454040515834 9.208187539523747 0 1.0994850021680094 1.6989700043360187 0.0 1.5189301784845295 + + {[SA]|[TG]}YEQVKQV;{[SA]|[TG]}YE[AG]VKQV;{[SA]|[TG]}YEQVK[AG]V;{[SA]|[TG]}YE[AG]VK[AG]V;[YE]QV[KQ]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}Y[TP][KQ]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}VVQQY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{[HG]|PP}D{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[QP];[YE][AG]V[KQ]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}[TP]Y[KQ]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7.3292;6.4527;6.1779;5.3055;2.0832;1.8706;1.6083;1.6034;1.2015;1.0875 +;-;-;-;-;-;-;-;-;- + 376 + 1 1.633 43108.2 1.0 2495 5140 7634 HBL1_DMSO_200M_050219_1,7637 HBL1_DMSO_200M_050219_1,7637,SAYEQVKQV True True SAYEQVKQV 40.247686 526.273852527142 7308319.5 7634.0 nc|ENSG00000054282|Q86SQ7-3|SDCCAG8;;ENSG00000054282|ENST00000366541|SDCCAG8;;nc|ENSG00000054282|Q86SQ7-2|SDCCAG8;;nc|ENSG00000054282|Q86SQ7-4|SDCCAG8 7.108224868774414 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7638 40.25 118.0 411970.0 25 0 32452.0 + 4856 DGAPPPNQI 9 82 454.72708443755056 907.4396159419013 2 454.7272827029228 MULTI CID FTMS 0 0 0 7634 287108.96875 0.1612193828385194 22 -1.261871337890625 4 Unmodified _DGAPPPNQI_ ENSG00000184007|ENST00000647444|PTP4A2;ENST00000532001.6_1_1:32374455-32378590:-|nuORF;nc|ENSG00000184007|Q12974-3|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2 23.78978130925829 0.2284941198415988 3 [DG]APN 5 4 38.773 0.0 0.0 4.2728 0.0 0.0 0.0 450.2350620691074 450.2350620691074 26.554556341805764 0.0 0.0 0.0 0 1.424742501084005 0.9208187539523752 0.0 0.0 [DG]APN 4.2728 - 108 1 1.633 42782.9 1.0 2496 5140 7634 HBL1_DMSO_200M_050219_1,7638 HBL1_DMSO_200M_050219_1,7638,DGAPPPNQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7639 40.264 800.0 223070.0 25 0 5969.7 -1 0 122 768.672146794141 2302.994610982623 3 768.6716796755791 MULTI CID FTMS 0 0 0 7634 220446.5 0.7173072648443698 -1 0.0623588562011718 5 3 ETVGGDE 7 -1 75.878 0.0 0.0 3.2947 0.0 0.0 1597.7241230321142 0.0 1597.7241230321142 0.0 39.06881689349298 0.0 0.0 0 1.9119543704721595 0.0 1.2302046884880935 0.0 ETVGGDE 3.2947 - 1306 1 1.633 131252.5 0.9700000286102296 2497 5140 7634 HBL1_DMSO_200M_050219_1,7639 HBL1_DMSO_200M_050219_1,7639, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7640 40.278 786.0 147980.0 25 0 6008.0 -1 IRCNGLMMNAF 11 121 663.8068737392693 1325.5991945453386 2 663.8059570193291 MULTI CID FTMS 0 0 0 7634 202341.890625 0.2501163486277699 4 -0.3193397521972656 6 Carbamidomethyl (C) _IRC(Carbamidomethyl (C))NGLMMNAF_ ENSG00000058335|ENST00000558480|RASGRF1;ENST00000560334.5_1_15:79271198-79356973:-|nuORF;nc|ENSG00000058335|Q13972|RASGRF1 36.12702656103203 0.2720571796884491 3 {[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F} 13 -1 + 99.664 0.0 0.0 7.5184 7.5184 91.138 0.0 0.0 0.0 15.448823548105352 16.642078980768062 15.448823548105352 8.93482997267752 0 0.9802046884880936 1.154901959985743 0.3494850021680094 1.9124379954164592 {[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}A[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QQNA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{[NV]|[RG]}TYQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};[YE]AREAQQNA{M(Oxidation (M))|F} 7.5184;6.8444;6.834;6.834;6.834;6.7995;6.7537;6.5373;6.353;6.1648 -;-;-;-;-;-;-;-;-;- 3846 1 1.633 89074.8 1.0 2498 5140 7634 HBL1_DMSO_200M_050219_1,7640 HBL1_DMSO_200M_050219_1,7640,IRCNGLMMNAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7641 40.291 800.0 282960.0 25 0 21050.0 -1 0 134 646.9653514114539 1937.8742248345616 3 647.2987548708916 MULTI CID FTMS 0 0 0 7634 191415.484375 0.6029508319040396 -1 0.0623588562011718 7 3 [YG]SWGEGYSYTWN{I|L}KK 16 -1 [YG]SWGE + + 75.157 11.836 1.7425 3.8783 3.8783 52.198 0.0 0.0 0.0 0.0 59.02926965982364 0.0 0.0 0 2.305462187404089 0.0 0.7302046884880937 0.6109243748081782 [YG]SWGEGYSYTWN{I|L}KK 3.8783 - 3648 + 1 1.633 166624.4 0.9900000095367432 2499 5140 7634 HBL1_DMSO_200M_050219_1,7641 HBL1_DMSO_200M_050219_1,7641, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7643 40.296 23.0 2783500.0 25 0 409340.0 + 34322 SLSCCDGF 8 90 416.1535730344686 830.2925931357372 2 416.1539184451103 MULTI CID FTMS 0 0 0 7642 2652106.25 0.8031183636846364 1 -0.0673027038574218 1 Unmodified _SLSCCDGF_ REV__ENSG00000143669|ENST00000389793|LYST;REV__ENST00000465349.5_1_1:235954948-235996891:-|nuORF;REV__ENST00000489585.5_1_1:235926109-235996891:-|nuORF;REV__nc|ENSG00000143669|Q99698-2|LYST;REV__nc|ENSG00000143669|Q99698-3|LYST 5.760428011301431 0.7893668129297577 3 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 1.6253 0.0 0.0 665.2132607156185 0.0 665.2132607156185 0.0 3.7409401350310034 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.6253 + + 43 + 1 1.633 56782.7 1.0 2500 5141 7642 HBL1_DMSO_200M_050219_1,7643 HBL1_DMSO_200M_050219_1,7643,SLSCCDGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7644 40.298 115.0 587190.0 25 0 50452.0 -1 DAPMTPKQI 9 105 508.75723967225866 1015.4999264113172 2 508.7581970095634 MULTI CID FTMS 0 0 0 7642 316519.4375 0.2888446206050147 10 -0.6398086547851562 2 Oxidation (M) _DAPM(Oxidation (M))TPKQI_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1 36.12702656103203 0.0967173616627612 3 {[DA]|[EG]}{I|L}[WR]DQ{I|L} 8 -1 + 36.869 0.0 0.0 3.6306 3.6306 73.575 0.0 0.0 0.0 13.309393168299458 9.377596850824744 9.377596850824744 3.064250275506879 0 0.3054621874040891 1.6989700043360187 0.4247425010840047 0.6694451763165201 {[DA]|[EG]}{I|L}[WR]DQ{I|L};{[DA]|[EG]}{I|L}[EC]PKQ{I|L};{[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TPKQ{I|L};{[DA]|[EG]}{I|L}[WR]D[AG]{I|L};{[DA]|[EG]}{I|L}[EC]PK[AG]{I|L};{[DA]|[EG]}{I|L}[EC]P[Q{I|L}]K;{[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TPK[AG]{I|L};{[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TP[Q{I|L}]K;W{I|L}{I|L}{I|L}[HM]{[CT]|[{M(Oxidation (M))|F}G]};{[DA]|[EG]}{I|L}HH{NN|[MP]|[D{I|L}]|[EV]}[VP] 3.6306;3.3289;3.0337;2.4342;2.1378;1.8941;1.8426;1.5989;1.3744;1.1548 -;-;+;-;-;-;-;-;-;- + 287 + 1 1.633 60249.9 1.0 2501 5141 7642 HBL1_DMSO_200M_050219_1,7644 HBL1_DMSO_200M_050219_1,7644,DAPMTPKQI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7645 40.3 61.0 998420.0 25 0 123140.0 + 18331 KVLERVNAV 9 80 514.3160580634008 1026.6175631936014 2 514.3162109255791 MULTI CID FTMS 0 0 0 7642 728771.4375 0.1145289623242621 -2 0.1152915954589843 3 Unmodified _KVLERVNAV_ ENSG00000100911|ENST00000216802|PSME2;ENST00000442824.1_1_5:97549420-97549822:+|nuORF;ENST00000453033.1_1_13:49345602-49345743:+|nuORF;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;ENST00000559359.1_1_14:24613399-24613677:-|nuORF 29.081581746732265 0.1611639662936252 3 KV{I|L}S 4 6 50.433 0.0 0.0 4.9125 0.0 0.0 0.0 596.3167208307249 596.3167208307249 28.38168156311241 0.0 0.0 0.0 0 0.8494850021680094 1.0 0.0 0.0 KV{I|L}S 4.9125 - 127 + 1 1.633 53508.1 1.0 2502 5141 7642 HBL1_DMSO_200M_050219_1,7645 HBL1_DMSO_200M_050219_1,7645,KVLERVNAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7646 40.302 125.0 501020.0 25 0 48420.0 + 11223 GEPREGEI 8 98 443.7163037799485 885.418054626697 2 443.7167541384697 MULTI CID FTMS 0 0 0 7642 442363.84375 0.0321994060056072 20 -1.16497802734375 4 Unmodified _GEPREGEI_ REV__ENST00000557806.5_1_14:24641555-24641950:+|nuORF 21.53697664764585 0.591232569029014 3 {[DA]|[EG]}[RP]ADE{I|L} 8 -1 + 58.193 0.0 0.0 6.5723 6.5723 60.84 0.0 0.0 0.0 23.95242492728684 24.99282213420201 23.95242492728684 0.0 0 0.8807196863200843 2.0 0.0 0.0 {[DA]|[EG]}[RP]ADE{I|L};{[DA]|[EG]}[RP]EGE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}H]|[RQ]}GE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[HT][MT]{I|L} 6.5723;6.5723;3.0249;0.70829 -;+;-;- + 137 1 1.633 56503.7 1.0 2503 5141 7642 HBL1_DMSO_200M_050219_1,7646 HBL1_DMSO_200M_050219_1,7646,GEPREGEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7647 40.312 581.0 489390.0 25 0 74870.0 + 24796 MPILTMKEP 9 190 530.283287399653 1058.552021866106 2 530.2839843630791 MULTI CID FTMS 0 0 0 7642 355355.90625 0.7366048065463149 -1 0.0529327392578125 5 Unmodified _MPILTMKEP_ REV__ENSG00000143552|ENST00000368559|NUP210L;REV__nc|ENSG00000143552|Q5VU65-2|NUP210L 32.30548876998284 0.1201446275138228 3 MP{I|L}QQSRTV 9 -1 + 87.323 0.0 0.0 8.2493 8.2493 83.406 0.0 0.0 0.0 17.469617958179242 1.14965451004646 1.14965451004646 1.14965451004646 0 1.5189301784845295 1.5228787452803376 0.8116042352767734 0.8494850021680094 MP{I|L}QQSRTV;MP{I|L}QQSRVT;MP{I|L}QQSRS{I|L};MP{I|L}[AG]QSRTV;MP{I|L}Q[AG]SRTV;MP{I|L}[AG]QSRVT;MP{I|L}Q[AG]SRVT;MP{I|L}[AG]QSRS{I|L};MP{I|L}Q[AG]SRS{I|L};MP{I|L}QQ[PA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 8.2493;8.1407;7.8609;7.3794;7.3794;7.2708;7.2708;6.9911;6.9911;6.7044 -;-;-;-;-;-;-;-;-;- 1652 + 1 1.633 218720.5 1.0 2504 5141 7642 HBL1_DMSO_200M_050219_1,7647 HBL1_DMSO_200M_050219_1,7647,MPILTMKEP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7648 40.323 586.0 444130.0 25 0 39948.0 + 43988 YIDHGDPQV 9 197 522.2430450766909 1042.4715372201815 2 522.2431518435478 MULTI CID FTMS 0 0 0 7642 346989.15625 0.3781428830835845 -2 0.1152915954589843 6 Unmodified _YIDHGDPQV_ ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF 88.95385435242217 0.0153473310052057 3 [HD]GD{I|L}YPQV 9 4 + 65.456 0.0 0.0 6.2789 6.2789 87.914 0.0 0.0 0.0 9.164466087400392 16.47817481888638 9.164466087400392 9.164466087400392 0 1.0044321917401078 0.8860566476931632 0.75 0.0 [HD]GD{I|L}YPQV;[Y{I|L}]DHGDPQV;[HD]GD{I|L}YP[AG]V;{NN|[MP]|[D{I|L}]|[EV]}HYGDPQV;[Y{I|L}]{M(Oxidation (M))|F}NYPQV;{[HG]|PP}DD{I|L}YPQV;[HD]GD{I|L}{M(Oxidation (M))|F}{I|L}QV;[HD]GD{I|L}PYQV;[HD]{I|L}YGDPQV;[HD]GD{I|L}PQYV 6.2789;5.3998;5.3956;5.3675;5.2484;4.9005;4.8658;4.7898;4.7189;4.5267 -;+;-;-;-;-;-;-;-;- + 1497 1 1.633 209628.1 1.0 2505 5141 7642 HBL1_DMSO_200M_050219_1,7648 HBL1_DMSO_200M_050219_1,7648,YIDHGDPQV True True YIDHGDPQV 40.322649 522.243151843548 12856845.0 7642.0 ENST00000510626.5_1_4:3131970-3189635:+|nuORF;;ENSG00000197386|ENST00000355072|HTT 7.368394692738851 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7649 40.327 258.0 425190.0 25 0 50281.0 + 30045 QTVHEVTTV 9 132 507.2661266670884 1012.5177004009768 2 507.2662536501884 MULTI CID FTMS 0 0 0 7642 329853.90625 1.0 0 0.0 7 Unmodified _QTVHEVTTV_ ENSG00000000460|ENST00000359326|C1orf112;ENST00000498289.5_1_1:169773308-169819597:+|nuORF;nc|ENSG00000000460|Q9NSG2-2|FIRRM;nc|ENSG00000000460|Q9NSG2-3|FIRRM 34.10243960390752 0.1078313939113124 3 {[TV]|[{I|L}S]}T{M(Oxidation (M))|F}QVT{[MS]|[{M(Oxidation (M))|F}A]} 9 6 + 35.265 0.0 0.0 3.4829 3.4829 71.586 0.0 0.0 0.0 0.3480615260680793 -13.861599477931447 -13.861599477931447 2.218487496163561 0 0.0 0.8538719643217619 1.524227503252014 0.4247425010840047 {[TV]|[{I|L}S]}T{M(Oxidation (M))|F}QVT{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}T{M(Oxidation (M))|F}TVQ{[MS]|[{M(Oxidation (M))|F}A]};{[DS]|[MA]|[CV]|TT}V{M(Oxidation (M))|F}QVT{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}T{M(Oxidation (M))|F}E[KA]{[MS]|[{M(Oxidation (M))|F}A]};{[DS]|[MA]|[CV]|TT}V{M(Oxidation (M))|F}TVQ{[MS]|[{M(Oxidation (M))|F}A]};[HV]TVQ{[DS]|[MA]|[CV]|TT}EV;{[TV]|[{I|L}S]}T{M(Oxidation (M))|F}[KA]E{[MS]|[{M(Oxidation (M))|F}A]};{[DS]|[MA]|[CV]|TT}V{M(Oxidation (M))|F}E[KA]{[MS]|[{M(Oxidation (M))|F}A]};[HV]QVT{[DS]|[MA]|[CV]|TT}EV;[HV][KA]E{[DS]|[MA]|[CV]|TT}EV 3.4829;3.2638;3.0926;2.9941;2.8735;2.7948;2.6533;2.6038;2.5757;2.306 -;-;-;-;-;-;-;-;-;- 841 1 1.633 88315.3 1.0 2506 5141 7642 HBL1_DMSO_200M_050219_1,7649 HBL1_DMSO_200M_050219_1,7649,QTVHEVTTV True True QTVHEVTTV 40.327436 507.266253650188 1952908.25 7642.0 ENSG00000000460|ENST00000359326|C1orf112;;nc|ENSG00000000460|Q9NSG2-2|FIRRM;;ENST00000498289.5_1_1:169773308-169819597:+|nuORF;;nc|ENSG00000000460|Q9NSG2-3|FIRRM 5.440177758534749 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7650 40.331 203.0 351930.0 25 0 28539.0 37631 TLLMYRFF 8 126 364.19736676619056 0 364.1972839236259 PEAK CID FTMS 0 0 0 7642 239801.765625 0.1963491169881675 16 -1.0028915405273438 8 Unmodified _TLLMYRFF_ ENST00000442255.5_1_3:16313687-16345066:+|nuORF 5.760428011301431 0.5786759180849727 3 {M(Oxidation (M))|F} 1 7 4.6041 0.0 0.0 0.63384 0.0 0.0 363.2133458581188 213.0998476617797 576.3131935198985 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.63384 + + 17 + 1 1.633 63045.8 1.0 2507 5141 7642 HBL1_DMSO_200M_050219_1,7650 HBL1_DMSO_200M_050219_1,7650,TLLMYRFF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7651 40.345 792.0 250970.0 25 0 16887.0 + 36277 SYGPRAEEY 9 199 536.2403325603341 1070.466112187468 2 536.2413818240166 MULTI CID FTMS 0 0 0 7642 194731.078125 0.1207193172078085 10 -0.6398086547851562 9 Unmodified _SYGPRAEEY_ ENSG00000141522|ENST00000269321|ARHGDIA 21.53697664764585 0.2571576504437394 3 {[DA]|[EG]}E[YG][KP]EY 9 6 + 31.511 0.0 0.0 2.9436 2.9436 81.27 0.0 0.0 0.0 9.34353900550198 6.672561049816451 6.672561049816451 16.589001661099076 0 1.5189301784845295 1.6989700043360187 0.0 0.0 {[DA]|[EG]}E[YG][KP]EY;[{I|L}P]{[WN]|[YH]}EYSY;{[SA]|[TG]}Y[DV][QP]EY;[{I|L}P]{[WN]|[YH]}YSEY;{[{M(Oxidation (M))|F}C]|[YS]}A[DV][QP]EY;{NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][KP]EY;[YE]{I|L}E{M(Oxidation (M))|F}AHY;[QP]{[RE]|[WV]}EYSY;[YE]{I|L}N[PG]SEY;[{I|L}P]{[WN]|[YH]}YESY 2.9436;1.3939;1.2143;1.2032;1.1029;0.83549;0.68068;0.59177;0.55436;0.55029 -;-;-;-;-;-;-;-;-;- 888 1 1.633 153008.7 1.0 2508 5141 7642 HBL1_DMSO_200M_050219_1,7651 HBL1_DMSO_200M_050219_1,7651,SYGPRAEEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7652 40.359 788.0 325860.0 25 0 22034.0 -1 0 125 571.2860064844343 1710.8361900535028 3 571.2864868044853 MULTI CID FTMS 0 0 0 7642 188508.234375 0.8458316253034229 -1 0.0529327392578125 10 3 [VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}GVVVGQT[EC]K 16 -1 [VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}G + + 44.351 -6.7786 -0.90462 2.5924 2.5924 49.524 0.0 0.0 0.0 0.0 24.41271547323993 0.0 0.0 0 1.2302046884880935 0.0 0.8441876774005248 0.2215141619232908 [VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}GVVVGQT[EC]K 2.5924 - 1765 + 1 1.633 190566.9 1.0 2509 5141 7642 HBL1_DMSO_200M_050219_1,7652 HBL1_DMSO_200M_050219_1,7652, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7654 40.363 2.9 17388000.0 25 0 4137600.0 + 5046 DGYEQAARV 9 52 504.7401092137372 1007.4656654942744 2 504.7409240603447 MULTI CID FTMS 0 0 0 7653 18473652.0 0.0331974477772781 17 -1.0485153198242188 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 56.17704186161178 0.0281986971544335 3 [DG]YEQAA[RV] 9 0 + 72.853 0.0 0.0 7.2313 7.2313 91.402 0.0 0.0 0.0 61.61622501717439 8.384767769392738 8.384767769392738 9.208187539523747 0 0.6237125054200234 1.3010299956639813 0.4247425010840047 1.048455006504028 + + [DG]YEQAA[RV];[DG]YE[AG]AA[RV];[DG]YEV[NG][RV];[DG]YV[DN]A[RV];[DG]YVE[NG][RV] 7.2313;6.3174;5.3702;4.7738;4.475 +;-;-;-;- + 86 + 1 1.633 43834.2 1.0 2510 5142 7653 HBL1_DMSO_200M_050219_1,7654 HBL1_DMSO_200M_050219_1,7654,DGYEQAARV True True DGYEQAARV 40.36301 504.740924060345 17915317248.0 7653.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 9.34884230295817 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7655 40.364 6.6 7988800.0 25 0 897230.0 + 45056 YPYGDGNRSV 10 46 564.2590411024025 1126.503529271605 2 564.2592040896416 MULTI CID FTMS 0 0 0 7653 7977224.5 0.8925880464598193 1 -0.0915679931640625 2 Unmodified _YPYGDGNRSV_ ENSG00000156735|ENST00000287322|BAG4;ENST00000531211.1_1_8:70772071-70772629:-|nuORF;nc|ENSG00000156735|O95429-2|BAG4 18.373094154950223 0.5392593366289069 3 YPYGD 5 5 66.454 0.0 0.0 5.8991 0.0 0.0 0.0 528.2533604049502 528.2533604049502 54.463950151760656 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + YPYGD 5.8991 + + 98 + 1 1.633 49004.4 1.0 2511 5142 7653 HBL1_DMSO_200M_050219_1,7655 HBL1_DMSO_200M_050219_1,7655,YPYGDGNRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7656 40.365 33.0 2048100.0 25 0 461850.0 -1 0 92 448.2749137367906 447.2676372701906 1 448.2750732302666 MULTI CID FTMS 0 0 0 7653 2216574.25 0.8784989288636879 1 -0.0915679931640625 3 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.633 56277.7 1.0 2512 5142 7653 HBL1_DMSO_200M_050219_1,7656 HBL1_DMSO_200M_050219_1,7656, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7657 40.367 35.0 2061500.0 25 0 108100.0 + 3827 DAIRVTKTV 9 85 501.8008188365463 1001.5870847398926 2 501.8009521365166 MULTI CID FTMS 0 0 0 7653 2004655.25 0.2596340641227693 -1 0.0673027038574218 4 Unmodified _DAIRVTKTV_ ENSG00000120008|ENST00000263461|WDR11 51.76506608216692 0.0364999419761865 3 {[DA]|[EG]}{I|L}RVTKTV 9 0 + 61.08 0.0 0.0 6.0983 6.0983 89.34 0.0 0.0 0.0 8.594530900531012 35.31833587933264 8.594530900531012 11.232040608115454 0 1.4489700043360187 1.3979400086720375 0.6747425010840047 0.0 + + {[DA]|[EG]}{I|L}RVTKTV;{[TV]|[{I|L}S]}[RK]{I|L}ADTV;{[TV]|[{I|L}S]}[RK]{I|L}ATDV;[{I|L}A]DRVTKTV;[KT][RV]{I|L}ADTV;[KT][RV]{I|L}ATDV 6.0983;4.9769;4.5573;4.4988;3.6664;3.2468 +;-;-;-;-;- + 513 1 1.633 61722.3 1.0 2513 5142 7653 HBL1_DMSO_200M_050219_1,7657 HBL1_DMSO_200M_050219_1,7657,DAIRVTKTV True True DAIRVTKTV 40.366548 501.800952136517 99099350.0 7653.0 ENSG00000120008|ENST00000263461|WDR11 5.851866563161214 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7658 40.368 36.0 1909400.0 25 0 138530.0 4399 DAVRIKTSI 9 105 334.8695187528489 1001.5867268587468 3 334.8690673708916 MULTI CID FTMS 0 0 0 7653 1030593.6875 0.2758675788697417 -1 0.0673027038574218 5 Unmodified _DAVRIKTSI_ ENSG00000197658|ENST00000612278|SLC22A24;nc|ENSG00000197658|Q8N4F4-3|SLC22A24 24.881564428377168 0.2146028316269493 3 DAV[R{I|L}]TKTV 9 3 + 50.473 0.0 0.0 5.0393 5.0393 75.885 0.0 0.0 0.0 26.369842609761687 6.783343794609138 6.783343794609138 2.0289375146764854 0 0.2887254899964357 1.6989700043360187 0.7742275032520141 0.0 DAV[R{I|L}]TKTV;DA{I|L}[RV]TKTV 5.0393;4.8367 -;- 330 + 1 1.633 62433.1 1.0 2514 5142 7653 HBL1_DMSO_200M_050219_1,7658 HBL1_DMSO_200M_050219_1,7658,DAVRIKTSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7659 40.369 69.0 1041000.0 25 0 119970.0 + 18354 KVLVNREAV 9 101 343.2131763796824 1026.6176997392472 3 343.2130615115166 MULTI CID FTMS 0 0 0 7653 500859.90625 0.4353979828089221 -1 0.0673027038574218 6 Unmodified _KVLVNREAV_ REV__ENST00000547566.5_1_12:54680505-54680764:+|nuORF 16.942295170755138 0.3780752226737986 3 VKAV 4 -1 20.222 0.0 0.0 1.9697 0.0 0.0 611.3373802512409 0.0 611.3373802512409 0.0 1.8591848268249545 0.0 0.0 0 0.5044321917401079 0.0 0.0 0.5 VKAV 1.9697 - 236 1 1.633 63833.4 1.0 2515 5142 7653 HBL1_DMSO_200M_050219_1,7659 HBL1_DMSO_200M_050219_1,7659,KVLVNREAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7660 40.373 167.0 718850.0 25 0 44506.0 + 38737 TVADKIHSV 9 136 323.84956194656155 0 323.8498107790947 PEAK CID FTMS 0 0 0 7653 453298.09375 1.0 0 0.0 7 Unmodified _TVADKIHSV_ ENSG00000276023|ENST00000617516|DUSP14 39.94969957227396 0.061964645358372 3 T 1 8 10.044 0.0 0.0 1.5556 0.0 0.0 473.56304798804655 68.05133997134999 541.6143879593965 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + T 1.5556 + + 90 + 1 1.633 99996.4 1.0 2516 5142 7653 HBL1_DMSO_200M_050219_1,7660 HBL1_DMSO_200M_050219_1,7660,TVADKIHSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7661 40.382 520.0 489250.0 25 0 28207.0 + 10658 FVQLCPYKGQG 11 129 620.3132969374445 1238.612040941689 2 620.3135864138603 MULTI CID FTMS 0 0 0 7653 417388.46875 0.4537679839171008 9 -0.5725059509277344 8 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 3 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 89.388 12.92 3.261 7.2168 7.2168 62.671 0.0 0.0 0.0 0.0 65.28425533356624 0.0 0.0 0 3.274227503252014 0.0 0.0 2.134286745032816 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 7.2168 - 4544 + 1 1.633 186855.6 1.0 2517 5142 7653 HBL1_DMSO_200M_050219_1,7661 HBL1_DMSO_200M_050219_1,7661,FVQLCPYKGQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7662 40.384 116.0 514980.0 25 0 29165.0 + 3387 AYQYTIRAH 9 92 561.7873956920549 1121.5602384509098 2 561.7881957888603 MULTI CID FTMS 0 0 0 7653 325314.75 0.4460350203195182 2 -0.1991043090820312 9 Unmodified _AYQYTIRAH_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 32.037481411007896 0.1235546156350648 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QYT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}H 9 0 + 62.145 0.0 0.0 5.541 5.541 84.838 0.0 0.0 0.0 45.94257726651058 5.942124970647029 5.942124970647029 8.310384486277798 0 0.7302046884880937 2.0 0.0 0.5 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QYT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QH[VP]PV[DP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]YT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HQ[VP]PV[DP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QH[VP]PD[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[PG]T{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HQ[VP]PD[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]H[VP]PV[DP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QH[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QVV[MT]V[DP] 5.541;4.8;4.7199;4.22;4.1415;4.1399;3.5615;3.5371;3.4437;3.2812 +;-;-;-;-;-;-;-;-;- + 441 + 1 1.633 51383.2 1.0 2518 5142 7653 HBL1_DMSO_200M_050219_1,7662 HBL1_DMSO_200M_050219_1,7662,AYQYTIRAH True True AYQYTIRAH 40.384219 561.78819578886 4236672.5 7653.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENSG00000132182|ENST00000254508|NUP210 4.285632848739624 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7663 40.395 616.0 339040.0 25 0 32998.0 + 963 AFNEETHSY 9 173 549.2301939475643 1096.4458349619283 2 549.2302123904228 MULTI CID FTMS 0 0 0 7653 288864.0 1.0 0 0.0 10 Unmodified _AFNEETHSY_ ENSG00000185917|ENST00000332131|SETD4;nc|ENSG00000185917|Q9NVD3-3|SETD4;nc|ENSG00000185917|Q9NVD3-4|SETD4 96.28474662873226 0.0124266067997264 3 A{M(Oxidation (M))|F}NEETHSY 9 0 + 79.938 0.0 0.0 7.2906 7.2906 93.471 0.0 0.0 0.0 40.245353581228365 12.83645560927063 12.83645560927063 13.455612550363796 0 0.7302046884880937 0.0 1.7856668758921828 0.4247425010840047 + + A{M(Oxidation (M))|F}NEETHSY;A{M(Oxidation (M))|F}GGEETHSY;A{M(Oxidation (M))|F}NEET{[WS]|[C(Carbamidomethyl (C)){I|L}]}N;A{M(Oxidation (M))|F}NEET[NG]{[ES]|[DT]|[{I|L}C]};A{M(Oxidation (M))|F}GGEET{[WS]|[C(Carbamidomethyl (C)){I|L}]}N;A{M(Oxidation (M))|F}NE{M(Oxidation (M))|F}[YG]SY;[HM]HTEEN{[TV]|[{I|L}S]};A{M(Oxidation (M))|F}NEMHWY;A{M(Oxidation (M))|F}NEE{[CA]|SS}[WQ];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[SG]TEEN{[TV]|[{I|L}S]} 7.2906;6.0634;6.0126;5.552;5.1728;5.0373;4.9244;4.8116;4.7598;4.7193 +;-;-;-;-;-;-;-;-;- + 2418 + 1 1.633 157426.4 1.0 2519 5142 7653 HBL1_DMSO_200M_050219_1,7663 HBL1_DMSO_200M_050219_1,7663,AFNEETHSY True True AFNEETHSY 40.394981 549.230212390423 1802865.75 7653.0 nc|ENSG00000185917|Q9NVD3-4|SETD4;;ENSG00000185917|ENST00000332131|SETD4;;nc|ENSG00000185917|Q9NVD3-3|SETD4 8.994985580444336 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7664 40.407 704.0 261450.0 25 0 15702.0 -1 TDLYSDCL 8 189 493.7100891047425 985.4056252762848 2 493.7101623415947 MULTI CID FTMS 0 0 0 7653 239786.765625 0.1614643195419224 4 -0.3475112915039062 11 Carbamidomethyl (C) _TDLYSDC(Carbamidomethyl (C))L_ ENSG00000134815|ENST00000328771|DHX34;ENST00000486327.6_1_19:47884337-47884637:+|nuORF 14.581692164780916 0.6954967302934248 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T[KQ]Y[CS] 8 -1 + 17.969 0.0 0.0 1.8235 1.8235 69.58 0.0 0.0 0.0 0.979534126928467 -4.794567474556704 -4.794567474556704 2.560977433327743 0 0.0 0.0 0.5709991640913001 0.4634679910804404 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T[KQ]Y[CS];[YV]{[ET]|[MV]}TSP[CS];[HA][QT]{[QD]|[EN]|[WG]|[KD]|[RS]}P[CS];[YV][{I|L}V]CCP[CS];[HA]{[{M(Oxidation (M))|F}H]|[RQ]}TSP[CS];{[ES]|[DT]|[{I|L}C]}[Y{I|L}]TSP[CS];[HA][WQ]ASP[CS];{NN|[MP]|[D{I|L}]|[EV]}[YT]TSP[CS] 1.8235;1.5636;1.0558;0.82712;0.69713;0.29779;0.16651;0.087254 -;-;-;-;-;-;-;- 616 1 1.633 138926.0 1.0 2520 5142 7653 HBL1_DMSO_200M_050219_1,7664 HBL1_DMSO_200M_050219_1,7664,TDLYSDCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7665 40.421 800.0 204730.0 25 0 40540.0 -1 0 65 1108.8056088251456 3323.3949970756366 3 1109.473071277142 MULTI CID FTMS 0 0 0 7653 185821.609375 0.1906519309503202 -2 0.1202354431152343 12 3 {M(Oxidation (M))|F}Y 2 -1 7.9588 0.0 0.0 0.23948 0.0 0.0 1310.4578155344243 1699.7886446588502 3010.2464601932747 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.23948 - 20 + 1 1.633 137448.8 0.7599999904632568 2521 5142 7653 HBL1_DMSO_200M_050219_1,7665 HBL1_DMSO_200M_050219_1,7665, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7666 40.435 800.0 235740.0 25 0 11871.0 14150 ICLEKEKEP 9 229 544.7885638556595 1087.562574778119 2 545.2626220583916 MULTI CID FTMS 0 0 0 7653 65466.4140625 0.789568225510239 2 -0.1991043090820312 13 Unmodified _ICLEKEKEP_ ENSG00000213967|ENST00000594466|ZNF726;nc|ENSG00000213967|A6NNF4-2|ZNF726 10.799506525563784 0.5443532743200366 3 {[SA]|[TG]}YY 4 9 23.893 0.0 0.0 2.197 0.0 0.0 0.0 600.347821303048 600.347821303048 4.038085942483619 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.0 {[SA]|[TG]}YY 2.197 - 1005 + 1 1.633 145415.0 0.9800000190734864 2522 5142 7653 HBL1_DMSO_200M_050219_1,7666 HBL1_DMSO_200M_050219_1,7666,ICLEKEKEP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7667 40.45 800.0 266120.0 25 0 28890.0 + 2958 AVIDEKNTSV 10 192 538.2858854613304 0 538.2858764529228 PEAK CID FTMS 0 0 0 7653 112105.8515625 1.0 0 0.0 14 Unmodified _AVIDEKNTSV_ ENSG00000166479|ENST00000299608|TMX3 62.57269311338072 0.0203476658606485 3 {I|L}DGS 4 7 30.092 0.0 0.0 2.8004 0.0 0.0 170.1070135653518 529.2752183735385 699.3822319388903 0.0 0.0 0.0 0.0 0 0.5891368308784531 0.0 0.9163865622122672 0.0 {I|L}DGS 2.8004 - 412 + 1 1.633 162643.6 0.7200000286102295 2523 5142 7653 HBL1_DMSO_200M_050219_1,7667 HBL1_DMSO_200M_050219_1,7667,AVIDEKNTSV True True AVIDEKNTSV 40.450208 538.285876452923 788357.8125 7653.0 ENSG00000166479|ENST00000299608|TMX3 5.302993138631185 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7669 40.455 16.0 3013500.0 25 0 702790.0 -1 QGDGSCWSMD 10 69 579.6962530528273 1157.3779531724545 2 579.6968261599541 MULTI CID FTMS 0 0 0 7668 3371145.5 0.8777646946172707 1 -0.1075363159179687 1 Carbamidomethyl (C),Oxidation (M) _QGDGSC(Carbamidomethyl (C))WSM(Oxidation (M))D_ ENST00000550735.6_1_12:112337947-112339324:+|nuORF 8.745405648335112 0.6861838735306406 3 DY 2 -1 25.261 0.0 0.0 2.1826 0.0 0.0 861.2772279300701 0.0 861.2772279300701 0.0 16.475540908469597 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 DY 2.1826 - 50 + 1 1.636 39000.9 1.0 2524 5143 7668 HBL1_DMSO_200M_050219_1,7669 HBL1_DMSO_200M_050219_1,7669,QGDGSCWSMD False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7670 40.456 34.0 1796300.0 25 0 396440.0 + 4268 DAPVNVNAK 9 63 464.2480315316318 926.4815101300636 2 464.2482482790947 MULTI CID FTMS 0 0 0 7668 1366098.375 0.4062218159305393 5 -0.3400726318359375 2 Unmodified _DAPVNVNAK_ REV__ENSG00000183091|ENST00000397345|NEB;REV__ENSG00000183091|ENST00000397345|NEB;REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-3|NEB 10.823927491677226 0.5436922275383211 3 {[DA]|[EG]}PP 4 -1 38.94 0.0 0.0 4.203 0.0 0.0 0.0 543.2902315729124 543.2902315729124 27.971062485323515 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[DA]|[EG]}PP 4.203 - 15 + 1 1.636 50251.2 1.0 2525 5143 7668 HBL1_DMSO_200M_050219_1,7670 HBL1_DMSO_200M_050219_1,7670,DAPVNVNAK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7671 40.457 66.0 1167900.0 25 0 185320.0 + 41550 VPPDTRNVV 9 60 498.7770266984527 995.5395004637054 2 498.7775146365166 MULTI CID FTMS 0 0 0 7668 888990.6875 0.6150667772161036 12 -0.6947746276855469 3 Unmodified _VPPDTRNVV_ ENSG00000275835|ENST00000615383|TUBGCP5;nc|ENSG00000275835|Q96RT8-2|TUBGCP5 15.248480904072842 0.4239247793462406 3 VPPD 4 5 56.186 0.0 0.0 5.6437 0.0 0.0 0.0 584.3164047931099 584.3164047931099 45.589693232405125 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VPPD 5.6437 + + 27 + 1 1.636 63745.5 1.0 2526 5143 7668 HBL1_DMSO_200M_050219_1,7671 HBL1_DMSO_200M_050219_1,7671,VPPDTRNVV False True VPPDTRNVV 40.457347 498.777514636517 145238640.0 7668.0 nc|ENSG00000275835|Q96RT8-2|TUBGCP5;;ENSG00000275835|ENST00000615383|TUBGCP5 5.860486507415772 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7672 40.459 47.0 1371100.0 25 0 195130.0 -1 PLHWVCKK 8 73 534.2943387729905 1066.574124612781 2 534.2953979372978 MULTI CID FTMS 0 0 0 7668 699525.0 0.2626975406924884 12 -0.6947746276855469 4 Carbamidomethyl (C) _PLHWVC(Carbamidomethyl (C))KK_ ENSG00000139187|ENST00000356986|KLRG1;ENST00000538029.1_1_12:9102760-9162130:+|nuORF;nc|ENSG00000139187|Q96E93|KLRG1 14.581692164780916 0.6954967302934248 3 {I|L}PPEP 5 -1 64.196 0.0 0.0 6.0189 0.0 0.0 0.0 530.2813204400999 530.2813204400999 60.21652514092061 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 {I|L}PPEP 6.0189 - 30 + 1 1.636 56979.5 1.0 2527 5143 7668 HBL1_DMSO_200M_050219_1,7672 HBL1_DMSO_200M_050219_1,7672,PLHWVCKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7673 40.46 81.0 925330.0 25 0 172980.0 + 41797 VPVQPGSSV 9 92 435.2395483599104 868.4645437866208 2 435.2395202517509 MULTI CID FTMS 0 0 0 7668 678759.8125 0.6891560764919188 2 -0.1995658874511718 5 Unmodified _VPVQPGSSV_ ENSG00000149476|ENST00000394900|TKFC;ENST00000524953.1_1_11:61110045-61110363:+|nuORF;nc|ENSG00000149476|Q3LXA3-2|TKFC 53.57557251787612 0.0325303259649373 3 [VP]QV 4 5 28.684 0.0 0.0 3.3029 0.0 0.0 0.0 442.1932580506459 442.1932580506459 9.23393743112328 0.0 0.0 0.0 0 0.3252574989159953 1.3010299956639813 0.0 0.25 [VP]QV 3.3029 - 158 1 1.636 63589.3 1.0 2528 5143 7668 HBL1_DMSO_200M_050219_1,7673 HBL1_DMSO_200M_050219_1,7673,VPVQPGSSV True True VPVQPGSSV 40.460458 435.239520251751 15455828.0 7668.0 ENSG00000149476|ENST00000394900|TKFC;;nc|ENSG00000149476|Q3LXA3-2|TKFC;;ENST00000524953.1_1_11:61110045-61110363:+|nuORF 5.789343357086182 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7674 40.463 133.0 709320.0 25 0 103620.0 + 44824 YPNPYSKHV 9 111 368.8544182922333 1103.5414254768998 3 368.8540527224541 MULTI CID FTMS 0 0 0 7668 450220.03125 0.9766284998325292 -7 0.4317436218261719 6 Unmodified _YPNPYSKHV_ ENSG00000169230|ENST00000303204|PRELID1;ENST00000511309.5_1_5:176730986-176733129:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1 43.77239144664712 0.0547478964384323 3 YPNPY[KS]HV 9 0 + 52.863 0.0 0.0 4.7903 4.7903 73.082 0.0 0.0 0.0 23.922363561572965 0.8715017571890016 0.8715017571890016 0.8715017571890016 0 0.5796896906561032 1.154901959985743 0.4247425010840047 0.0 + + YPNPY[KS]HV;YPNPY[KS]VH;YPN{I|L}{M(Oxidation (M))|F}[KS]HV;YPN{I|L}{M(Oxidation (M))|F}[KS]VH;YPNV[YV]NHV;YPGGPY[KS]HV;YPNV[YV]NVH;YPGGPY[KS]VH;YPGG{I|L}{M(Oxidation (M))|F}[KS]HV;YPGG{I|L}{M(Oxidation (M))|F}[KS]VH 4.7903;4.7113;4.6267;4.5478;3.969;3.9559;3.8901;3.8769;3.7923;3.7133 +;-;-;-;-;-;-;-;-;- + 374 + 1 1.636 86153.4 1.0 2529 5143 7668 HBL1_DMSO_200M_050219_1,7674 HBL1_DMSO_200M_050219_1,7674,YPNPYSKHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7675 40.466 151.0 819060.0 25 0 86321.0 + 39513 VATITKTV 8 127 416.7603833111653 831.5062136891305 2 416.7603027224541 MULTI CID FTMS 0 0 0 7668 439138.5625 0.7659621761985641 -1 0.0915679931640625 7 Unmodified _VATITKTV_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107 47.74868867922204 0.1498366402366518 3 AST{I|L}TVAV 8 4 40.415 0.0 0.0 4.8605 0.0 0.0 71.0742436139664 0.0 71.0742436139664 0.0 14.098370540637717 0.0 0.0 0 0.1923877696554315 0.0 0.2396518287104437 0.0 AST{I|L}TVAV 4.8605 - 555 1 1.636 104755.9 1.0 2530 5143 7668 HBL1_DMSO_200M_050219_1,7675 HBL1_DMSO_200M_050219_1,7675,VATITKTV False True VATITKTV 40.466145 416.760302722454 3099482.5 7668.0 ENSG00000111581|ENST00000229179|NUP107;;nc|ENSG00000111581|P57740-2|NUP107 2.8409108916918435 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7676 40.47 180.0 525240.0 25 0 63743.0 + 38534 TSSAVTTALK 10 118 489.7768143269586 0 489.7769653201103 PEAK CID FTMS 0 0 0 7668 327155.71875 0.8493482261987805 -1 0.0915679931640625 8 Unmodified _TSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 28.23362336080872 0.231954783421961 3 SSAVTTA 7 3 38.843 0.0 0.0 3.9735 0.0 0.0 101.05019740216092 256.1667574518188 357.2169548539797 0.0 0.0 0.0 0.0 0 0.5891368308784531 0.0 0.0 0.0 + SSAVTTA 3.9735 + + 180 + 1 1.636 74662.4 1.0 2531 5143 7668 HBL1_DMSO_200M_050219_1,7676 HBL1_DMSO_200M_050219_1,7676,TSSAVTTALK False True TSSAVTTALK 40.469637 489.77696532011 2340225.5 7668.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 8.26162306467692 2.0 True 10.0 False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 7677 40.473 173.0 396160.0 25 0 21849.0 + 36678 TAYQNQQI 8 103 483.2371471811752 964.4597414291504 2 483.2378723025322 MULTI CID FTMS 0 0 0 7668 283793.75 0.5837358593629428 2 -0.1995658874511718 9 Unmodified _TAYQNQQI_ ENSG00000092607|ENST00000369429|TBX15;ENSG00000112837|ENST00000369663|TBX18;ENSG00000122145|ENST00000373296|TBX22;ENST00000606521.1_1_6:85452265-85472428:-|nuORF;nc|ENSG00000092607|Q96SF7-2|TBX15;nc|ENSG00000122145|Q9Y458-2|TBX22 21.74664581756881 0.5868176546531598 3 [TA]Y{M(Oxidation (M))|F} 4 5 26.929 0.0 0.0 2.7921 0.0 0.0 0.0 479.2212520094816 479.2212520094816 9.913520492638916 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.2614393726401688 0.0 [TA]Y{M(Oxidation (M))|F} 2.7921 - 262 1 1.636 56527.8 1.0 2532 5143 7668 HBL1_DMSO_200M_050219_1,7677 HBL1_DMSO_200M_050219_1,7677,TAYQNQQI False True TAYQNQQI 40.473006 483.237872302532 2742823.5 7668.0 ENSG00000112837|ENST00000369663|TBX18;;ENSG00000122145|ENST00000373296|TBX22;;nc|ENSG00000122145|Q9Y458-2|TBX22;;ENST00000606521.1_1_6:85452265-85472428:-|nuORF;;nc|ENSG00000092607|Q96SF7-2|TBX15;;ENSG00000092607|ENST00000369429|TBX15 4.114186684290568 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7678 40.476 151.0 403050.0 25 0 62168.0 + 38736 TVADKIHSV 9 87 485.2705180910827 968.5264832489654 2 485.2722350955009 MULTI CID FTMS 0 0 0 7668 286887.9375 0.4500694046320936 1 -0.1075363159179687 10 Unmodified _TVADKIHSV_ ENSG00000276023|ENST00000617516|DUSP14 26.268140514670165 0.1969607489560049 3 {[TV]|[{I|L}S]}ADK{I|L}HSV 9 0 + 49.685 0.0 0.0 5.1299 5.1299 78.527 0.0 0.0 0.0 21.86359540953315 10.145680359949552 10.145680359949552 3.4678748622465605 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + + {[TV]|[{I|L}S]}ADK{I|L}HSV;{[TV]|[{I|L}S]}WK{I|L}HSV;{[TV]|[{I|L}S]}[PS]VVD[RP];{[VA]|[{I|L}G]}[NG]{I|L}KD[RP];{[VA]|[{I|L}G]}[DV]VVD[RP] 5.1299;4.7719;2.8185;0.58627;0.13181 +;-;-;-;- + 136 + 1 1.636 49967.3 1.0 2533 5143 7668 HBL1_DMSO_200M_050219_1,7678 HBL1_DMSO_200M_050219_1,7678,TVADKIHSV False True TVADKIHSV 40.475995 485.2715 5656624.25 7668.0 ENSG00000276023|ENST00000617516|DUSP14 7.744551022847493 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7679 40.49 800.0 135230.0 25 0 30153.0 -1 0 55 1120.7828647434646 3359.326764830594 3 1121.451831042767 MULTI CID FTMS 0 0 0 7668 250940.25 0.4777357927513223 2 -0.1995658874511718 11 3 E 1 -1 6.9897 0.0 0.0 0.20807 0.0 0.0 2703.0992127010268 524.1632174127561 3227.262430113783 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20807 - 19 + 1 1.636 93376.9 0.8500000238418579 2534 5143 7668 HBL1_DMSO_200M_050219_1,7679 HBL1_DMSO_200M_050219_1,7679, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7680 40.493 172.0 367410.0 25 0 27550.0 + 313 ADVSLRNSV 9 119 480.7585518328315 959.502550732463 2 480.7589294314384 MULTI CID FTMS 0 0 0 7668 224060.234375 0.0194663750022154 15 -0.9113426208496094 12 Unmodified _ADVSLRNSV_ ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085|ACACA 34.40172386719151 0.1061884637610825 3 {[DA]|[EG]}V{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PSV 9 3 + 56.053 0.0 0.0 5.8419 5.8419 89.195 0.0 0.0 0.0 31.36046240493748 14.973024840566469 14.973024840566469 13.539171939081172 0 1.2302046884880935 1.5228787452803376 0.566901560044258 0.0 {[DA]|[EG]}V{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PSV;{[DA]|[EG]}{I|L}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PSV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TGQPPSV;[VS]{M(Oxidation (M))|F}[H{I|L}]TASV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[H{I|L}]TASV;{[VA]|[{I|L}G]}Y[H{I|L}]TASV;[VG]W[Q{I|L}]TASV;{[QV]|[N{I|L}]|[RA]|[KV]}[W{I|L}]GTASV;[VG]W[WR]ASV;[WR]H[Y{I|L}]SV 5.8419;4.4308;2.9061;2.2738;2.0798;1.9207;1.835;1.523;1.4736;1.1096 -;-;-;-;-;-;-;-;-;- 657 + 1 1.636 51470.1 1.0 2535 5143 7668 HBL1_DMSO_200M_050219_1,7680 HBL1_DMSO_200M_050219_1,7680,ADVSLRNSV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7681 40.496 163.0 481720.0 25 0 77819.0 28003 PMNKIPKD 8 100 471.7575454630159 0 471.7570983767509 PEAK CID FTMS 0 0 0 7668 229328.859375 0.4479619277836531 15 -0.9113426208496094 13 Unmodified _PMNKIPKD_ ENSG00000102763|ENST00000379310|VWA8;nc|ENSG00000102763|A3KMH1-3|VWA8 18.13498045792455 0.4501116112875982 3 P 1 7 10.044 0.0 0.0 1.0668 0.0 0.0 131.04130835403515 710.3841399931109 841.4254483471461 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 + P 1.0668 + + 31 + 1 1.636 66426.5 1.0 2536 5143 7668 HBL1_DMSO_200M_050219_1,7681 HBL1_DMSO_200M_050219_1,7681,PMNKIPKD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7682 40.499 112.0 436590.0 25 0 33712.0 + -1 AETLCLTV 8 89 453.73315791187247 905.451762890545 2 453.7340270876884 MULTI CID FTMS 0 0 0 7668 217061.65625 0.7183750842640908 -2 0.1588706970214843 14 Carbamidomethyl (C) _AETLC(Carbamidomethyl (C))LTV_ REV__ENSG00000166478|ENST00000396602|ZNF143;REV__nc|ENSG00000166478|P52747-2|ZNF143;REV__nc|ENSG00000166478|P52747-3|ZNF143 19.438996006549623 0.6237395211498085 3 {[CP]|[EA]}T 3 -1 14.538 0.0 0.0 1.6056 0.0 0.0 0.0 601.3014997892355 601.3014997892355 2.5950424643130745 0.0 0.0 0.0 0 0.5 0.0 0.6861818737241735 0.0 {[CP]|[EA]}T 1.6056 + + 96 1 1.636 41753.8 1.0 2537 5143 7668 HBL1_DMSO_200M_050219_1,7682 HBL1_DMSO_200M_050219_1,7682,AETLCLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7683 40.513 747.0 349060.0 25 0 47813.0 + 45824 YYPDGHNDY 9 166 572.2219709916787 1142.4293890501574 2 572.2225829958916 MULTI CID FTMS 0 0 0 7668 204041.34375 0.9622788122774454 1 -0.1075363159179687 15 Unmodified _YYPDGHNDY_ ENSG00000141380|ENST00000415083|SS18 56.17704186161178 0.0281986971544335 3 YYPTDC(Carbamidomethyl (C))NNP 9 5 + 58.677 0.0 0.0 5.1362 5.1362 73.66 0.0 0.0 0.0 26.34028529490349 0.0704806799475221 0.0704806799475221 0.5207895249162675 0 0.9177353201839438 2.0 0.6694451763165201 1.0356668758921828 YYPTDC(Carbamidomethyl (C))NNP;YYP[DG]H[DN]Y;YYYDD{[QG]|[NA]}GY;YYY{[QD]|[EN]|[WG]|[KD]|[RS]}[DN]Y;YYYDD[YN]Q;YYPTDC(Carbamidomethyl (C))NGGP;YYYDDP[NG]H;YYYDD[NS]{[CT]|[{M(Oxidation (M))|F}G]};YYP[DG]H[DG]GY;YYY{[QD]|[EN]|[WG]|[KD]|[RS]}[DG]GY 5.1362;5.0906;4.5381;4.3506;4.2988;4.1287;3.9588;3.862;3.838;3.7983 -;+;-;-;-;-;-;-;-;- + 841 + 1 1.636 193467.9 1.0 2538 5143 7668 HBL1_DMSO_200M_050219_1,7683 HBL1_DMSO_200M_050219_1,7683,YYPDGHNDY True True YYPDGHNDY 40.51287 572.222582995892 12807285.0 7668.0 ENSG00000141380|ENST00000415083|SS18 8.596482594807943 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7684 40.521 456.0 355760.0 25 0 32131.0 + -1 RYIAQVKHL 9 167 376.5022818776815 0 376.5601989626884 PEAK CID FTMS 0 0 0 7668 20436.84765625 1.0 0 0.0 16 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))KRC(Carbamidomethyl (C))FDEL_ ENST00000267068.5_2_13:33110791-33110824:-|nuORF 3.5964929083625545 0.5870767149301087 3 AG 2 -1 7.4743 0.0 0.0 0.99525 0.0 0.0 247.7030753078295 372.2070962538304 619.9101715616598 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AG 0.99525 - 12 + 1 1.636 134753.5 1.0 2539 5143 7668 HBL1_DMSO_200M_050219_1,7684 HBL1_DMSO_200M_050219_1,7684,CKRCFDEL False False RYIAQVKHL 40.520949 376.560198962688 1433924.5 7668.0 ENST00000267068.5_2_13:33110791-33110824:-|nuORF 2.9469977219899497 3.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7685 40.525 224.0 678150.0 25 0 94827.0 + 26691 NYNNQSSNF 9 170 544.2255328922117 1086.4365128512234 2 544.2225829958916 MULTI CID FTMS 0 0 0 7668 158481.203125 0.1228021807721085 -2 0.1588706970214843 17 Unmodified _NYNNQSSNF_ chr12:54282662-54282800|48|694.65|0.0|26.05|+|ENST00000677249|HNRNPA1,HNRNPA1;chr12:54283967-54284240|48|13.83|0.0|20.4|+|ENST00000677375|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;ENST00000432375.1_1_6:32293532-32293889:+|nuORF;ENST00000444886.1_1_9:128358610-128358904:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1 74.42276476219924 0.019389277360085 3 [YN]NNQS 6 3 51.393 0.0 0.0 4.7304 0.0 0.0 0.0 363.1331430604609 363.1331430604609 13.863384726428748 0.0 0.0 0.0 0 0.0 2.0 0.5 1.6549471895720984 + [YN]NNQS 4.7304 + + 2099 1 1.636 114994.2 1.0 2540 5143 7668 HBL1_DMSO_200M_050219_1,7685 HBL1_DMSO_200M_050219_1,7685,NYNNQSSNF True True NYNNQSSNF 40.525187 544.222582995892 17705962.0 7668.0 ENSG00000135486|ENST00000340913|HNRNPA1;;chr12:54282662-54282800|48|694.65|0.0|26.05|+|ENST00000677249|HNRNPA1,HNRNPA1;;nc|ENSG00000135486|P09651-3|HNRNPA1;;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;;ENSG00000224578|ENST00000565308|HNRNPA1L3;;chr12:54283967-54284240|48|13.83|0.0|20.4|+|ENST00000677375|HNRNPA1,HNRNPA1;;ENST00000444886.1_1_9:128358610-128358904:+|nuORF;;ENSG00000139675|ENST00000357495|HNRNPA1L2;;nc|ENSG00000135486|P09651-2|HNRNPA1;;ENST00000432375.1_1_6:32293532-32293889:+|nuORF 7.608393828074138 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7686 40.539 800.0 170260.0 25 0 44759.0 -1 0 81 998.4107157803162 2992.2103179411483 3 998.745654284954 MULTI CID FTMS 0 0 0 7668 163592.75 1.0 0 0.0 18 3 TSNTN 5 -1 21.514 0.0 0.0 0.719 0.0 0.0 2073.7811453133 398.1681307428344 2471.9492760561343 0.0 0.0 0.0 0.0 0 0.0 0.0 1.045114016114533 0.3807196863200844 TSNTN 0.719 - 533 + 1 1.636 111513.5 0.6700000166893005 2541 5143 7668 HBL1_DMSO_200M_050219_1,7686 HBL1_DMSO_200M_050219_1,7686, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7687 40.544 190.0 693940.0 25 0 79041.0 + + 21575 AYYDPKTRAM 10 103 405.75828894683167 809.5020249604634 2 405.7572509646416 MULTI CID FTMS 0 0 0 7668 130687.9375 1.0 0 0.0 19 Unmodified _LPKLPVGS_ ENSG00000164609|ENST00000297151|SLU7;ENST00000520841.1_1_5:159833399-159835410:-|nuORF 26.88365393820708 0.4786498634179528 3 {I|L}PKK{I|L}PD 7 -1 + 43.709 0.0 0.0 5.3995 5.3995 77.87 0.0 0.0 0.0 24.935785609054616 5.3439541511755095 5.3439541511755095 2.525749891599532 0 0.9247425010840048 1.0 0.0 0.3807196863200844 {I|L}PKK{I|L}PD;{I|L}PK{I|L}KPD;{I|L}PKK[DP]{I|L};{I|L}P[{I|L}V]QQ{I|L} 5.3995;5.0875;3.7001;1.294 -;-;-;- 277 + 1 1.636 110728.6 1.0 2542 5143 7668 HBL1_DMSO_200M_050219_1,7687 HBL1_DMSO_200M_050219_1,7687,LPKLPVGS False False AYYDPKTRAM 40.543849 405.757250964642 3871475.25 7668.0 ENSG00000164609|ENST00000297151|SLU7;;ENST00000520841.1_1_5:159833399-159835410:-|nuORF 6.513785203297933 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7688 40.558 800.0 288260.0 25 0 13393.0 -1 0 110 922.0266402546052 4605.0968189400255 5 922.8303100466728 MULTI CID FTMS 0 0 0 7668 108578.9453125 1.0 0 0.0 20 3 SAE{[{M(Oxidation (M))|F}H]|[RQ]}E 6 -1 29.966 0.0 0.0 0.65071 0.0 0.0 645.2594926357418 3256.535800145481 3901.795292781223 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 SAE{[{M(Oxidation (M))|F}H]|[RQ]}E 0.65071 - 977 + 1 1.636 156589.5 0.5099999904632568 2543 5143 7668 HBL1_DMSO_200M_050219_1,7688 HBL1_DMSO_200M_050219_1,7688, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7690 40.564 198.0 706240.0 25 0 97161.0 39562 VCFKIARD 8 143 476.2574249361268 950.5002969390536 2 476.2570373415947 MULTI CID FTMS 0 0 0 7689 168210.3125 0.0158806775724294 31 -1.777008056640625 1 Unmodified _VCFKIARD_ ENST00000538470.2_1_11:61067610-61070684:-|nuORF 13.50788311687929 0.7113601687236069 3 {[DS]|[MA]|[CV]|TT}PP 4 6 33.823 0.0 0.0 3.5585 0.0 0.0 0.0 551.2959507892117 551.2959507892117 22.50230257039521 0.0 0.0 0.0 0 0.2396518287104437 1.5228787452803376 0.0 0.0 {[DS]|[MA]|[CV]|TT}PP 3.5585 - 155 + 1 1.636 108438.9 1.0 2544 5144 7689 HBL1_DMSO_200M_050219_1,7690 HBL1_DMSO_200M_050219_1,7690,VCFKIARD False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7691 40.577 800.0 212840.0 25 0 10904.0 + 944 AFISKVSTH 9 203 495.2743190430227 988.5340851528454 2 495.2759887576103 MULTI CID FTMS 0 0 0 7689 59315.76953125 0.0206148954567448 11 -0.5872383117675781 2 Unmodified _AFISKVSTH_ ENSG00000122882|ENST00000372979|ECD;nc|ENSG00000122882|O95905-2|ECD;nc|ENSG00000122882|O95905-3|ECD 29.081581746732265 0.1611639662936252 3 [{I|L}P][MT]KS{I|L} 7 7 21.04 0.0 0.0 2.1284 0.0 0.0 0.0 215.08261246902944 215.08261246902944 7.274823528805621 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.2887254899964357 0.0 [{I|L}P][MT]KS{I|L} 2.1284 - 1043 1 1.636 130015.6 0.6499999761581421 2545 5144 7689 HBL1_DMSO_200M_050219_1,7691 HBL1_DMSO_200M_050219_1,7691,AFISKVSTH False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7692 40.579 26.0 3997600.0 25 0 507930.0 + 36241 SYAPRRGEF 9 76 361.5171551251042 1081.5296359755127 3 361.5172607302666 MULTI CID FTMS 0 0 0 7689 2296202.5 0.7220431642166086 -1 0.1075363159179687 3 Unmodified _SYAPRRGEF_ ENSG00000197157|ENST00000354725|SND1 27.628801355627647 0.1796483985696185 3 SYA[RP]{M(Oxidation (M))|F}[VG]W 9 3 + 54.741 0.0 0.0 5.0615 5.0615 78.317 0.0 0.0 0.0 41.55388247842918 1.5487980323444006 1.5487980323444006 3.4678748622465605 0 0.3494850021680094 2.0 0.0 0.8807196863200843 SYA[RP]{M(Oxidation (M))|F}[VG]W;SYA[RP][R{M(Oxidation (M))|F}]W;SYA[RP]{[RE]|[WV]}G{M(Oxidation (M))|F};S{M(Oxidation (M))|F}S[RP]{[RE]|[WV]}G{M(Oxidation (M))|F};S{M(Oxidation (M))|F}S[RP]{M(Oxidation (M))|F}[VG]W;S{M(Oxidation (M))|F}S[RP][R{M(Oxidation (M))|F}]W;S{M(Oxidation (M))|F}EP[{I|L}T]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 5.0615;4.7408;3.734;3.0629;2.5412;2.2205;2.0439 -;-;-;-;-;-;- 180 + 1 1.636 89910.8 1.0 2546 5144 7689 HBL1_DMSO_200M_050219_1,7692 HBL1_DMSO_200M_050219_1,7692,SYAPRRGEF False True SYAPRRGEF 40.578649 361.517260730267 51178866.0 7689.0 ENSG00000197157|ENST00000354725|SND1 10.089805285135904 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7693 40.58 28.0 2579000.0 25 0 368630.0 + 4253 DAPRVGDEV 9 75 479.2352814599626 956.4560099867252 2 479.2353393435478 MULTI CID FTMS 0 0 0 7689 2124274.0 0.590294192020941 -1 0.1075363159179687 4 Unmodified _DAPRVGDEV_ ENSG00000162783|ENST00000367577|IER5 22.65808497894818 0.2428932432760099 3 {[DA]|[EG]}DV[RP]GEV 9 4 + 58.139 0.0 0.0 6.0786 6.0786 82.47 0.0 0.0 0.0 9.150378042405904 12.935684192257996 9.150378042405904 4.010234424404686 0 0.8807196863200843 2.0 0.0 0.0 {[DA]|[EG]}DV[RP]GEV;{[DA]|[EG]}PR[DV]GEV;{[DA]|[EG]}DV[RP]ADV;{[DA]|[EG]}PR[VG]DEV;{[DA]|[EG]}PR[DV]ADV;[RP]VGDEGEV;{[DA]|[EG]}PR[VG]EDV;[RP]VGDADEV;[RP]VGDEADV;[RP]VGDAEDV 6.0786;5.6593;5.5797;5.3445;5.1604;5.1219;4.8457;4.8071;4.623;4.3083 -;-;-;+;-;-;-;-;-;- + 344 1 1.636 59093.5 1.0 2547 5144 7689 HBL1_DMSO_200M_050219_1,7693 HBL1_DMSO_200M_050219_1,7693,DAPRVGDEV False True DAPRVGDEV 40.579826 479.235339343548 35793328.0 7689.0 ENSG00000162783|ENST00000367577|IER5 3.930209636688232 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7694 40.581 38.0 2675800.0 25 0 640580.0 + 6127 DSYPRNPTV 9 91 524.7563997899667 1047.4982466467334 2 524.7566406130791 MULTI CID FTMS 0 0 0 7689 1618163.875 0.183749165661145 -3 0.2664070129394531 5 Unmodified _DSYPRNPTV_ ENSG00000057252|ENST00000367619|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;nc|ENSG00000057252|P35610-3|SOAT1 53.40400417844725 0.0329064971918313 3 {[DS]|[MA]|[CV]|TT}YPRNPTV 9 0 {[DS]|[MA]|[CV]|TT} + + 29.729 5.4576 2.701 2.8381 2.8381 49.878 0.0 0.0 0.0 0.0 16.91835570247462 0.0 0.0 0 1.579689690656103 0.0 0.4247425010840047 0.0 + + {[DS]|[MA]|[CV]|TT}YPRNPTV 2.8381 + + 196 + 1 1.636 83114.3 1.0 2548 5144 7689 HBL1_DMSO_200M_050219_1,7694 HBL1_DMSO_200M_050219_1,7694,DSYPRNPTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7695 40.583 71.0 1280500.0 25 0 214080.0 + + -1 YYQSGTRSL 9 74 537.7641835484849 1073.5138141637697 2 537.7645141482353 MULTI CID FTMS 0 0 0 7689 771907.875 0.7378769882996215 -1 0.1075363159179687 6 Oxidation (M) _YYQLM(Oxidation (M))DLL_ nc|ENSG00000078618|O43847-2|NRDC;ENSG00000078618|ENST00000352171|NRDC 50.855029805455786 0.1352255786796883 3 YYAGSGTR{[TV]|[{I|L}S]} 10 -1 + 90.711 0.0 0.0 8.4499 8.4499 87.705 0.0 0.0 0.0 83.1938973401629 4.884381005764311 4.884381005764311 3.521825181113627 0 0.8494850021680094 2.0 0.805462187404089 0.3807196863200844 YYAGSGTR{[TV]|[{I|L}S]};YYQSGTR{[TV]|[{I|L}S]};YYAGS[K{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]};YYAGS[WK]{[TV]|[{I|L}S]};YYAG{I|L}[KS]{[WS]|[C(Carbamidomethyl (C)){I|L}]};YYAG{I|L}[C(Carbamidomethyl (C))K]{[TV]|[{I|L}S]};YYQS[K{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]};YYQS[WK]{[TV]|[{I|L}S]};YYQ{I|L}[KS]{[WS]|[C(Carbamidomethyl (C)){I|L}]};YYQ{I|L}[C(Carbamidomethyl (C))K]{[TV]|[{I|L}S]} 8.4499;8.1219;6.936;6.936;6.6307;6.6307;6.613;6.613;6.3076;6.3076 -;-;-;-;-;-;-;-;-;- 199 + 1 1.636 71560.0 1.0 2549 5144 7689 HBL1_DMSO_200M_050219_1,7695 HBL1_DMSO_200M_050219_1,7695,YYQLMDLL False False YYQSGTRSL 40.582682 537.764514148235 6282424.0 7689.0 nc|ENSG00000078618|O43847-2|NRDC;;ENSG00000078618|ENST00000352171|NRDC 5.377158482869466 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7696 40.585 93.0 1392200.0 25 0 386280.0 + 36244 SYAPRRGEF 9 84 541.7723121119336 1081.5300712906671 2 541.7728149294853 MULTI CID FTMS 0 0 0 7689 729244.25 0.8428389797176005 -1 0.1075363159179687 7 Unmodified _SYAPRRGEF_ ENSG00000197157|ENST00000354725|SND1 10.823927491677226 0.5436922275383211 3 {M(Oxidation (M))|F}ER{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 8 7 + 31.86 0.0 0.0 2.9458 2.9458 76.462 0.0 0.0 0.0 11.911225100727592 5.929862658764264 5.929862658764264 6.989700043360188 0 0.4247425010840047 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}ER{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F};{M(Oxidation (M))|F}ER{[{M(Oxidation (M))|F}H]|[RQ]}{[TV]|[{I|L}S]}{M(Oxidation (M))|F} 2.9458;2.2995 -;- 47 + 1 1.636 101901.6 1.0 2550 5144 7689 HBL1_DMSO_200M_050219_1,7696 HBL1_DMSO_200M_050219_1,7696,SYAPRRGEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7697 40.586 68.0 1154000.0 25 0 259070.0 + 38744 TVAEKVDAV 9 85 466.25842364104494 930.50229434889 2 466.2584411501884 MULTI CID FTMS 0 0 0 7689 683156.3125 1.0 0 0.0 8 Unmodified _TVAEKVDAV_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-5|BRCC3;nc|ENSG00000185515|P46736|BRCC3 29.081581746732265 0.1611639662936252 3 {[TV]|[{I|L}S]}AGVDA 7 3 63.817 0.0 0.0 6.8583 0.0 0.0 0.0 314.1723134113809 314.1723134113809 40.92310064898193 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.7614393726401688 0.0 {[TV]|[{I|L}S]}AGVDA 6.8583 - 827 1 1.636 64527.6 1.0 2551 5144 7689 HBL1_DMSO_200M_050219_1,7697 HBL1_DMSO_200M_050219_1,7697,TVAEKVDAV False True TVAEKVDAV 40.586347 466.2595 4121172.5 7689.0 nc|ENSG00000185515|P46736-3|BRCC3;;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;;ENSG00000185515|ENST00000330045|BRCC3;;nc|ENSG00000185515|P46736|BRCC3;;nc|ENSG00000185515|P46736-5|BRCC3 2.635869781176249 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7698 40.588 88.0 645880.0 25 0 51082.0 + 35338 STASLPGPPG 10 97 442.2286970176269 882.4428411020539 2 442.2290222048759 MULTI CID FTMS 0 0 0 7689 453572.96875 0.7687937230082246 -2 0.1991043090820312 9 Unmodified _STASLPGPPG_ REV__ENSG00000150961|ENST00000280551|SEC24D;REV__ENST00000509818.5_1_4:119687763-119745832:-|nuORF;REV__ENST00000514561.5_1_4:119681750-119745902:-|nuORF;REV__nc|ENSG00000150961|O94855-2|SEC24D 14.838274106304384 0.5985701837916485 3 V 1 -1 14.604 0.0 0.0 1.655 0.0 0.0 765.3634323879899 0.0 765.3634323879899 0.0 3.037275116073344 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.655 - 96 + 1 1.636 49885.3 1.0 2552 5144 7689 HBL1_DMSO_200M_050219_1,7698 HBL1_DMSO_200M_050219_1,7698,STASLPGPPG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7699 40.592 179.0 746440.0 25 0 73669.0 + 3421 AYYDPKTRAM 10 84 405.8655193139674 0 405.8654968142509 PEAK CID FTMS 0 0 0 7689 387646.375 1.0 0 0.0 10 Unmodified _AYYDPKTRAM_ ENSG00000164609|ENST00000297151|SLU7;ENST00000520841.1_1_5:159833399-159835410:-|nuORF 21.59015148037692 0.285463238350904 3 PK[RD]A 5 6 15.273 0.0 0.0 1.8862 0.0 0.0 107.33214432891243 132.04570947818596 239.3778538070984 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 PK[RD]A 1.8862 - 65 + 1 1.636 110313.0 1.0 2553 5144 7689 HBL1_DMSO_200M_050219_1,7699 HBL1_DMSO_200M_050219_1,7699,AYYDPKTRAM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7700 40.6 458.0 336130.0 25 0 41223.0 + 36324 SYMASDRTY 9 141 547.234227187154 1092.453901441108 2 547.2345458865166 MULTI CID FTMS 0 0 0 7689 141060.296875 1.0 0 0.0 11 Unmodified _SYMASDRTY_ ENSG00000204524|ENST00000414468|ZNF805;nc|ENSG00000204524|Q5CZA5-2|ZNF805 29.84058131909904 0.1515068451768857 3 DSAM[MT] 6 7 35.08 0.0 0.0 3.2111 0.0 0.0 438.22371108222814 0.0 438.22371108222814 0.0 13.946888185338508 0.0 0.0 0 0.75 0.0 0.7614393726401688 0.0 DSAM[MT] 3.2111 - 417 1 1.636 122112.9 1.0 2554 5144 7689 HBL1_DMSO_200M_050219_1,7700 HBL1_DMSO_200M_050219_1,7700,SYMASDRTY False True SYMASDRTY 40.59989 547.234545886517 976723.75 7689.0 ENSG00000204524|ENST00000414468|ZNF805;;nc|ENSG00000204524|Q5CZA5-2|ZNF805 6.597353299458821 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7701 40.607 381.0 201150.0 25 0 11375.0 + -1 SSSGLNSEKVA 11 140 560.7774958710255 0 560.7778808474541 PEAK CID FTMS 0 0 0 7689 125559.0703125 1.0 0 0.0 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SSSGLNSEKVA_ ENSG00000108578|ENST00000261714|BLMH 24.881564428377168 0.2917536905067428 3 G{I|L} 2 -1 20.217 0.0 0.0 1.8058 0.0 0.0 303.1045073866144 643.3081759088499 946.412683295464 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 G{I|L} 1.8058 + + 24 + 1 1.636 63173.2 1.0 2555 5144 7689 HBL1_DMSO_200M_050219_1,7701 HBL1_DMSO_200M_050219_1,7701,SSSGLNSEKVA False False SSSGLNSEKVA 40.60673 560.777880847454 600650.5625 7689.0 ENSG00000108578|ENST00000261714|BLMH 6.952455361684163 2.0 True 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7702 40.621 800.0 236520.0 25 0 33235.0 + 9166 RYSSDVQEM 9 184 557.7449327203759 0 557.7458984255791 PEAK CID FTMS 0 0 0 7689 108673.5546875 1.0 0 0.0 13 Unmodified _FGFRCPQEM_ ENSG00000089154|ENST00000300648|GCN1 14.838274106304384 0.2567717476666951 3 EQV 3 8 22.619 0.0 0.0 2.0314 0.0 0.0 149.05290147415172 605.2327891657216 754.2856906398733 0.0 0.0 0.0 0.0 0 0.6421590589602533 0.0 0.0 0.0 EQV 2.0314 - 248 + 1 1.636 144704.6 0.6899999976158142 2556 5144 7689 HBL1_DMSO_200M_050219_1,7702 HBL1_DMSO_200M_050219_1,7702,FGFRCPQEM False False RYSSDVQEM 40.620561 557.745898425579 519810.9375 7689.0 ENSG00000089154|ENST00000300648|GCN1 5.339145024617513 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7703 40.634 800.0 297000.0 25 0 27664.0 + 40261 VGTFAFCAAV 10 237 493.245046643328 984.475540353456 2 493.2463867068291 MULTI CID FTMS 0 0 0 7689 103145.0859375 0.1643619680116294 13 -0.7364845275878906 14 Unmodified _VGTFAFCAAV_ REV__ENST00000427931.5_1_7:99156446-99158253:+|nuORF 21.74664581756881 0.480091245866545 3 QTADKY 6 -1 26.011 0.0 0.0 2.6421 0.0 0.0 260.13479435911853 0.0 260.13479435911853 0.0 10.838132617681776 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.5 QTADKY 2.6421 - 2533 + 1 1.636 179840.0 0.6100000143051147 2557 5144 7689 HBL1_DMSO_200M_050219_1,7703 HBL1_DMSO_200M_050219_1,7703,VGTFAFCAAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7704 40.65 800.0 57710.0 25 0 7392.8 -1 0 61 846.7038993665122 0 847.0386840701103 PEAK CID FTMS 0 0 0 7689 73789.34375 1.0 0 0.0 15 3 N{[RE]|[WV]}GTWG 7 -1 21.515 0.0 0.0 1.272 0.0 0.0 252.7872410164244 635.2049654596311 887.9922064760556 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 N{[RE]|[WV]}GTWG 1.272 - 86 + 1 1.636 40088.2 0.6200000047683716 2558 5144 7689 HBL1_DMSO_200M_050219_1,7704 HBL1_DMSO_200M_050219_1,7704, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7706 40.654 11.0 5215900.0 25 0 1165600.0 + 5047 DGYEQAARV 9 75 504.7401092137372 1007.4656654942744 2 504.7409545779228 MULTI CID FTMS 0 0 0 7705 4310646.0 0.0077462997284636 20 -0.9074478149414062 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 45.69961567697781 0.0497987121815769 3 [DG]YEQAARV 9 0 + 74.633 0.0 0.0 7.408 7.408 91.92 0.0 0.0 0.0 54.18807349846641 9.341605587590522 9.341605587590522 9.208187539523747 0 1.048455006504028 0.958607314841775 0.4247425010840047 0.7742275032520141 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YEV[NG]RV;[DG]YV[DN]ARV;[DG]YVE[NG]RV;[YT][YK]V[{M(Oxidation (M))|F}T]S 7.408;6.494;5.3721;4.9505;4.4769;0.83591 +;-;-;-;-;- + 151 + 1 1.642 54000.7 1.0 2559 5145 7705 HBL1_DMSO_200M_050219_1,7706 HBL1_DMSO_200M_050219_1,7706,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7707 40.655 25.0 1827600.0 25 0 98214.0 + 3828 DAIRVTKTV 9 79 501.8008188365463 1001.5870847398926 2 501.8010742068291 MULTI CID FTMS 0 0 0 7705 1269118.375 0.1643705876879004 2 -0.0999794006347656 2 Unmodified _DAIRVTKTV_ ENSG00000120008|ENST00000263461|WDR11 29.28111348798908 0.1586252267974456 3 {[DA]|[EG]}[R{I|L}]VTKTV 9 0 + 54.58 0.0 0.0 5.4494 5.4494 88.561 0.0 0.0 0.0 8.79039059593687 44.76473517390397 8.79039059593687 17.78659694992121 0 1.5044321917401078 1.3979400086720375 0.3494850021680094 0.0 + + {[DA]|[EG]}[R{I|L}]VTKTV;[{I|L}A][RD]VTKTV 5.4494;3.6735 +;- + 156 1 1.642 39256.7 1.0 2560 5145 7705 HBL1_DMSO_200M_050219_1,7707 HBL1_DMSO_200M_050219_1,7707,DAIRVTKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7708 40.657 74.0 1035100.0 25 0 71670.0 + 4400 DAVRIKTSI 9 109 334.8695187528489 1001.5867268587468 3 334.8692199587822 MULTI CID FTMS 0 0 0 7705 902681.875 0.2416283607848595 2 -0.0999794006347656 3 Unmodified _DAVRIKTSI_ ENSG00000197658|ENST00000612278|SLC22A24;nc|ENSG00000197658|Q8N4F4-3|SLC22A24 33.4449034751529 0.1114409586740657 3 {[TV]|[{I|L}S]}KR{I|L}TADV 9 7 + 38.267 0.0 0.0 3.8207 3.8207 68.843 0.0 0.0 0.0 0.0718484812920294 0.0718484812920294 0.0718484812920294 0.0718484812920294 0 0.3609243748081782 0.958607314841775 0.0 0.0 {[TV]|[{I|L}S]}KR{I|L}TADV;{[DA]|[EG]}V[R{I|L}][KT]TV;{[DA]|[EG]}{I|L}[RV][KT]TV;{[DA]|[EG]}V[R{I|L}][KT]VT;{[TV]|[{I|L}S]}KR{I|L}ATDV;[KT]VR{I|L}TADV;{[DA]|[EG]}{I|L}[RV][KT]VT;{[DA]|[EG]}V[R{I|L}]{I|L}[KS]T;{[DA]|[EG]}{I|L}[RV]{I|L}[KS]T;[KT]VR{I|L}ATDV 3.8207;3.8135;3.6148;3.2772;3.2195;3.1641;3.0786;2.9283;2.7296;2.563 -;-;-;-;-;-;-;-;-;- 613 1 1.642 66692.5 1.0 2561 5145 7705 HBL1_DMSO_200M_050219_1,7708 HBL1_DMSO_200M_050219_1,7708,DAVRIKTSI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7709 40.659 109.0 774040.0 25 0 44028.0 -1 0 83 694.3149247844913 2079.922944953674 3 694.3157836794853 MULTI CID FTMS 0 0 0 7705 776078.6875 0.965883109657144 1 -0.0563774108886718 4 3 GWTG[PS]{[SA]|[TG]} 8 -1 42.88 0.0 0.0 2.0616 0.0 0.0 1318.5895407451724 0.0 1318.5895407451724 0.0 27.781964799699992 0.0 0.0 0 1.0 0.0 1.3494850021680094 0.0 GWTG[PS]{[SA]|[TG]} 2.0616 - 419 1 1.642 67959.6 1.0 2562 5145 7705 HBL1_DMSO_200M_050219_1,7709 HBL1_DMSO_200M_050219_1,7709, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7710 40.662 108.0 824320.0 25 0 105110.0 + 18332 KVLERVNAV 9 104 514.3160580634008 1026.6175631936014 2 514.3166381716728 MULTI CID FTMS 0 0 0 7705 659322.0 0.1036147420329671 2 -0.0999794006347656 5 Unmodified _KVLERVNAV_ ENSG00000100911|ENST00000216802|PSME2;ENST00000442824.1_1_5:97549420-97549822:+|nuORF;ENST00000453033.1_1_13:49345602-49345743:+|nuORF;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;ENST00000559359.1_1_14:24613399-24613677:-|nuORF 43.77239144664712 0.0547478964384323 3 KV{I|L}S 4 6 45.438 0.0 0.0 4.426 0.0 0.0 0.0 596.3158663385374 596.3158663385374 23.70071134573636 0.0 0.0 0.0 0 0.8807196863200843 0.9208187539523752 0.0 0.0 KV{I|L}S 4.426 - 136 + 1 1.642 73928.4 1.0 2563 5145 7705 HBL1_DMSO_200M_050219_1,7710 HBL1_DMSO_200M_050219_1,7710,KVLERVNAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7711 40.663 69.0 1078400.0 25 0 87917.0 + + -1 YPDGTVKTV 9 116 490.26066353031456 978.5067741274293 2 490.2585327029228 MULTI CID FTMS 0 0 0 7705 461037.65625 0.7555825161669775 -1 0.0920295715332031 6 Oxidation (M) _M(Oxidation (M))LQTLASLS_ ENSG00000151849|ENST00000381884|CENPJ 28.486842064014134 0.1687311288560894 3 YPDA[VS]KTV 9 -1 + 64.396 0.0 0.0 6.581 6.581 78.137 0.0 0.0 0.0 31.706962271689747 0.4139268515822536 0.4139268515822536 0.4139268515822536 0 0.3054621874040891 1.5228787452803376 1.3539171939081172 0.0 YPDA[VS]KTV;YPDA[VS]KS{I|L};YPW[VS]KTV;YPWWKTV;YPW[VS]KS{I|L};YPWWKS{I|L};YPDA[VS]TKV;YPW[VS]TKV;YPWWTKV;[DP]GTVKTVY 6.581;6.5387;6.5342;6.4945;6.4919;6.4522;5.2469;5.2001;5.1603;3.5445 -;-;-;-;-;-;-;-;-;- 548 + 1 1.642 61321.6 1.0 2564 5145 7705 HBL1_DMSO_200M_050219_1,7711 HBL1_DMSO_200M_050219_1,7711,MLQTLASLS False False YPDGTVKTV 40.663279 490.258532702923 4005111.5 7705.0 ENSG00000151849|ENST00000381884|CENPJ 4.470392386118571 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7712 40.666 130.0 674810.0 25 0 59739.0 -1 0 126 448.2749137367906 447.2676372701906 1 448.2748596072197 MULTI CID FTMS 0 0 0 7705 352948.9375 0.139884898300757 4 -0.1607284545898437 7 3 H 1 -1 9.8329 0.0 0.0 2.1984 0.0 0.0 292.1979636635484 0.0 292.1979636635484 0.0 0.0789713359161581 0.0 0.0 0 0.0 0.0 0.0 0.0 H 2.1984 - 25 + 1 1.642 72509.0 1.0 2565 5145 7705 HBL1_DMSO_200M_050219_1,7712 HBL1_DMSO_200M_050219_1,7712, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7713 40.671 254.0 544270.0 25 0 32478.0 + 10659 FVQLCPYKGQG 11 121 620.3132969374445 1238.612040941689 2 620.3136474490166 MULTI CID FTMS 0 0 0 7705 349050.375 0.379473552356633 12 -0.6444549560546875 8 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 26.268140514670165 0.4754186812857754 3 [QP]NGPPPPPPQN 12 -1 [QP]NG + + 79.511 14.437 3.644 6.4194 6.4194 60.384 0.0 0.0 0.0 0.0 53.066468329908005 0.0 0.0 0 2.774227503252014 0.0 0.0 1.947621246364342 [QP]NGPPPPPPQN 6.4194 - 3886 + 1 1.642 103708.8 1.0 2566 5145 7705 HBL1_DMSO_200M_050219_1,7713 HBL1_DMSO_200M_050219_1,7713,FVQLCPYKGQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7714 40.676 308.0 292540.0 25 0 19642.0 + 43989 YIDHGDPQV 9 128 522.2430450766909 1042.4715372201815 2 522.2435180544853 MULTI CID FTMS 0 0 0 7705 178955.796875 0.1950229848856634 2 -0.0999794006347656 9 Unmodified _YIDHGDPQV_ ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF 37.97399986684836 0.0865783450051559 3 [HD]GD{I|L}YPQV 9 4 + 42.237 0.0 0.0 4.0516 4.0516 79.63 0.0 0.0 0.0 2.6312881885056782 30.816916238337345 2.6312881885056782 7.7815125038364386 0 0.6139829889124311 0.0 0.4247425010840047 0.0 [HD]GD{I|L}YPQV;[HV][YE]GDPQV;[HD]GD{I|L}YP[AG]V;{NN|[MP]|[D{I|L}]|[EV]}WNGDPQV;[EP]V[SG]{[QC]|[C(Carbamidomethyl (C))A]}PQV;{NN|[MP]|[D{I|L}]|[EV]}P[SG]{[QC]|[C(Carbamidomethyl (C))A]}PQV;[HD]G[Y{I|L}]DPQV;[HV][YE]GDP[AG]V;[AG]V[WD]GDPQV;[HD][Y{I|L}]GDPQV 4.0516;3.3052;3.1683;2.9517;2.4691;2.4471;2.4219;2.4219;2.1856;2.0689 -;-;-;-;-;-;-;-;-;- 226 1 1.642 77847.1 1.0 2567 5145 7705 HBL1_DMSO_200M_050219_1,7714 HBL1_DMSO_200M_050219_1,7714,YIDHGDPQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7715 40.679 163.0 435190.0 25 0 53511.0 + 25636 NFQTADKY 8 111 493.7325407008956 985.4505284685912 2 493.7316772341728 MULTI CID FTMS 0 0 0 7705 176817.6875 0.7291600903394857 -1 0.0920295715332031 10 Unmodified _NFQTADKY_ ENSG00000197943|ENST00000564138|PLCG2 41.8396318013385 0.2035142800366642 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QTADKY 8 0 + 47.401 0.0 0.0 4.8101 4.8101 84.233 0.0 0.0 0.0 32.452359395051715 11.920080530223132 11.920080530223132 9.262137858390808 0 0.7302046884880937 0.0 0.3494850021680094 0.5 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QTADKY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[AG]TADKY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QT[YR]SA;{[ES]|[DT]|[{I|L}C]}[HA]ATQSR;[HA]A[NP]ADKY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Q[KA]{[ES]|[DT]|[{I|L}C]}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[AG]T[YR]SA;[HA]Y[KP]Q{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QT[YN]S{I|L};{[ES]|[DT]|[{I|L}C]}[HA]AT[AG]SR 4.8101;3.8702;2.5617;2.4722;1.8349;1.6959;1.6218;1.1431;1.1073;1.0304 +;-;-;-;-;-;-;-;-;- + 323 + 1 1.642 59234.2 1.0 2568 5145 7705 HBL1_DMSO_200M_050219_1,7715 HBL1_DMSO_200M_050219_1,7715,NFQTADKY False True NFQTADKY 40.679494 493.731677234173 2138692.75 7705.0 ENSG00000197943|ENST00000564138|PLCG2 6.401920477549235 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7716 40.693 800.0 209410.0 25 0 14240.0 + -1 GQMDPSAQI 9 201 481.7166168604975 961.418680787795 2 481.7161132693291 MULTI CID FTMS 0 0 0 7705 108018.1171875 0.785975453983296 1 -0.0563774108886718 11 Oxidation (M) _GQM(Oxidation (M))DPSAQI_ ENST00000493446.1_1_7:1510215-1510538:-|nuORF;ENSG00000164880|ENST00000404767|INTS1 26.268140514670165 0.1969607489560049 3 {[QG]|[NA]}{M(Oxidation (M))|F}D[PS]AQ{I|L} 9 -1 + 18.907 0.0 0.0 1.9665 1.9665 69.519 0.0 0.0 0.0 2.4573873613738613 4.30249893994549 2.4573873613738613 2.4573873613738613 0 0.5242275032520141 0.0 0.5 0.7783773187068795 {[QG]|[NA]}{M(Oxidation (M))|F}D[PS]AQ{I|L};[AG]G{M(Oxidation (M))|F}D[PS]AQ{I|L};{[DA]|[EG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[PS]AQ{I|L};{[{M(Oxidation (M))|F}D]|MM}{[QG]|[NA]}[PS]AQ{I|L};[TA]C(Carbamidomethyl (C))D[PS]AQ{I|L};{[SA]|[TG]}{[C(Carbamidomethyl (C))E]|[WC]}[PS]AQ{I|L};[WH]A[W{M(Oxidation (M))|F}]C{I|L};{[QN]|[E{I|L}]|[KN]}A[PA][C(Carbamidomethyl (C))C][KA];{[SA]|[TG]}{[CA]|SS}D[PS]AQ{I|L} 1.9665;1.7109;1.5008;0.5472;0.48629;0.26863;0.20511;0.07894;0.06904 +;-;-;-;-;-;-;-;- + 374 1 1.642 126430.1 0.6399999856948853 2569 5145 7705 HBL1_DMSO_200M_050219_1,7716 HBL1_DMSO_200M_050219_1,7716,GQMDPSAQI False False GQMDPSAQI 40.693329 481.716113269329 1055146.0 7705.0 ENST00000493446.1_1_7:1510215-1510538:-|nuORF;;ENSG00000164880|ENST00000404767|INTS1 5.030184268951416 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7717 40.706 736.0 327120.0 25 0 11570.0 + 36213 SVYGKLRKV 9 272 350.5533993298428 0 350.5533935427666 PEAK CID FTMS 0 0 0 7705 105406.28125 0.7031701435671626 1 -0.0563774108886718 12 Unmodified _SVYGKLRKV_ ENSG00000172890|ENST00000319023|NADSYN1;ENST00000530831.1_1_11:71208417-71209628:+|nuORF;ENST00000531236.1_1_11:71196518-71209628:+|nuORF;nc|ENSG00000172890|Q6IA69-2|NADSYN1 33.4449034751529 0.0939430949041602 3 K{I|L} 2 7 9.464 0.0 0.0 1.3537 0.0 0.0 56.64107555918515 398.25156580142817 454.8926413606133 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K{I|L} 1.3537 + + 20 + 1 1.642 191119.9 1.0 2570 5145 7705 HBL1_DMSO_200M_050219_1,7717 HBL1_DMSO_200M_050219_1,7717,SVYGKLRKV True False SVYGKLRKV 40.706077 350.553393542767 786107.3125 7705.0 ENST00000530831.1_1_11:71208417-71209628:+|nuORF;;ENST00000531236.1_1_11:71196518-71209628:+|nuORF;;ENSG00000172890|ENST00000319023|NADSYN1;;nc|ENSG00000172890|Q6IA69-2|NADSYN1 5.485771497090657 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7719 40.722 800.0 65851.0 25 0 11831.0 -1 0 64 1040.9709799237523 2079.927406914305 2 1041.473925769329 MULTI CID FTMS 0 0 0 7718 49140.65625 0.5529069172566974 1 -0.0436019897460937 1 3 TG 2 -1 14.464 0.0 0.0 0.69541 0.0 0.0 1561.6924061210873 357.14216028385005 1918.8345664049373 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 TG 0.69541 - 79 + 1 1.642 38812.1 0.5099999904632568 2571 5146 7718 HBL1_DMSO_200M_050219_1,7719 HBL1_DMSO_200M_050219_1,7719, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7720 40.723 34.0 2374200.0 25 0 402670.0 + 4335 DASLQPRNV 9 86 500.2645818206685 998.5146107081372 2 500.2648498415947 MULTI CID FTMS 0 0 0 7718 1546190.125 0.1358789420919304 -5 0.4148139953613281 2 Unmodified _DASLQPRNV_ ENSG00000124226|ENST00000244061|RNF114;nc|ENSG00000124226|Q9Y508-2|RNF114 58.6788170122104 0.0268135626297836 3 {[DA]|[EG]}S{I|L}QRQD 8 3 72.957 0.0 0.0 7.3065 0.0 0.0 0.0 82.06692682437733 82.06692682437733 54.55259398656281 0.0 0.0 0.0 0 1.1989700043360187 2.0 0.3807196863200844 0.805462187404089 {[DA]|[EG]}S{I|L}QRQD 7.3065 - 569 + 1 1.642 66041.1 1.0 2572 5146 7718 HBL1_DMSO_200M_050219_1,7720 HBL1_DMSO_200M_050219_1,7720,DASLQPRNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7721 40.726 121.0 626700.0 25 0 55895.0 + 30702 RFRGQKQN 8 109 517.2852603454791 0 517.2852050662041 PEAK CID FTMS 0 0 0 7718 505333.9375 0.6534079374746244 13 -0.7010040283203125 3 Unmodified _RFRGQKQN_ REV__ENSG00000119777|ENST00000238788|TMEM214;REV__ENST00000478980.1_1_2:27256012-27257182:+|nuORF;REV__ENST00000495312.1_1_2:27255799-27258254:+|nuORF;REV__nc|ENSG00000119777|Q6NUQ4-2|TMEM214 5.230669730166228 0.5807325378471833 3 P 1 -1 6.9897 0.0 0.0 0.67693 0.0 0.0 129.06715047435802 803.4160860650999 932.483236539458 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.67693 - 4 + 1 1.642 61101.2 1.0 2573 5146 7718 HBL1_DMSO_200M_050219_1,7721 HBL1_DMSO_200M_050219_1,7721,RFRGQKQN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7722 40.74 800.0 326890.0 25 0 70526.0 -1 0 95 1095.776085837209 3284.306428111827 3 1096.445239245892 MULTI CID FTMS 0 0 0 7718 298100.8125 0.1401257614705033 -4 0.3475112915039062 4 3 A{M(Oxidation (M))|F}TTVT 6 -1 32.063 0.0 0.0 0.97623 0.0 0.0 2165.772576506772 495.1826265924438 2660.9552030992154 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6936726795685342 0.0 A{M(Oxidation (M))|F}TTVT 0.97623 - 965 + 1 1.642 216030.2 0.8600000143051147 2574 5146 7718 HBL1_DMSO_200M_050219_1,7722 HBL1_DMSO_200M_050219_1,7722, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7723 40.743 157.0 616390.0 25 0 133670.0 33799 SLDKDVLRNVS 11 116 415.8976952696849 1244.6712564092545 3 415.8980285525322 MULTI CID FTMS 0 0 0 7718 268229.3125 0.8226442038597487 -1 0.0563774108886718 5 Unmodified _SLDKDVLRNVS_ ENSG00000172752|ENST00000373157|COL6A5;nc|ENSG00000172752|A8TX70-2|COL6A5;nc|ENSG00000172752|A8TX70|COL6A5 19.143941131932102 0.6369309327873195 3 KQW 3 10 30.049 0.0 0.0 2.4142 0.0 0.0 784.4114857404312 0.0 784.4114857404312 0.0 13.235350690111568 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 KQW 2.4142 - 229 1 1.642 87769.5 1.0 2575 5146 7718 HBL1_DMSO_200M_050219_1,7723 HBL1_DMSO_200M_050219_1,7723,SLDKDVLRNVS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7724 40.75 382.0 374890.0 25 0 24140.0 + 24127 LYPKSTHAL 9 145 343.8621551199193 0 343.8622619509697 PEAK CID FTMS 0 0 0 7718 177651.984375 0.934140909461004 -4 0.3475112915039062 6 Unmodified _LYPKSTHAL_ ENSG00000164062|ENST00000296456|APEH;ENST00000480772.1_1_3:49720646-49720772:+|nuORF 29.081581746732265 0.1187435359889091 3 APK 3 7 11.427 0.0 0.0 1.6664 0.0 0.0 64.38650162084055 322.1121983796616 386.4987000005021 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 APK 1.6664 - 127 + 1 1.642 121316.1 1.0 2576 5146 7718 HBL1_DMSO_200M_050219_1,7724 HBL1_DMSO_200M_050219_1,7724,LYPKSTHAL True True LYPKSTHAL 40.749638 343.86226195097 27836938.0 7718.0 ENST00000480772.1_1_3:49720646-49720772:+|nuORF;;ENSG00000164062|ENST00000296456|APEH 5.348824818929036 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7726 40.754 118.0 669800.0 25 0 148400.0 + 288 ADPPTLRTG 9 80 464.2480315316318 926.4815101300636 2 464.2485839724541 MULTI CID FTMS 0 0 0 7725 454154.75 0.1350470585681504 9 -0.5103874206542969 1 Unmodified _ADPPTLRTG_ REV__CIITA|p.L1020Sfs*30|1|0.33|ENSG00000179583|chr16:10916453-10916453|C/-|frameshift_variant;REV__ENSG00000179583|ENST00000324288|CIITA;REV__ENST00000570546.5_1_16:10971115-11002148:+|nuORF;REV__ENST00000573309.5_1_16:10971115-11002148:+|nuORF;REV__nc|ENSG00000179583|P33076-2|CIITA;REV__nc|ENSG00000179583|P33076-4|CIITA;REV__nc|ENSG00000179583|P33076|CIITA 8.745405648335112 0.6093864874670651 3 {[DA]|[EG]}PP 4 -1 40.445 0.0 0.0 4.3655 0.0 0.0 0.0 543.2912691705686 543.2912691705686 29.731975075880328 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[DA]|[EG]}PP 4.3655 + + 18 + 1 1.642 67061.4 1.0 2577 5147 7725 HBL1_DMSO_200M_050219_1,7726 HBL1_DMSO_200M_050219_1,7726,ADPPTLRTG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7727 40.757 156.0 703740.0 25 0 127530.0 + 44825 YPNPYSKHV 9 115 368.8544182922333 1103.5414254768998 3 368.8539611697197 MULTI CID FTMS 0 0 0 7725 439634.125 0.9536652884631877 -3 0.1920089721679687 2 Unmodified _YPNPYSKHV_ ENSG00000169230|ENST00000303204|PRELID1;ENST00000511309.5_1_5:176730986-176733129:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1 32.78568957990786 0.1150597335874693 3 YPNPYSKHV 9 0 + 49.937 0.0 0.0 4.5251 4.5251 85.208 0.0 0.0 0.0 22.295321314946506 8.21211225000966 8.21211225000966 16.18562527100117 0 0.4419628234359579 1.3979400086720375 0.4247425010840047 0.0 + + YPNPYSKHV;YPNV[YV]NHV;Y[QT]VHKS{[QN]|[E{I|L}]|[KN]};Y[NP]V[KQ]N{[QN]|[E{I|L}]|[KN]} 4.5251;3.0584;1.7056;0.80058 +;-;-;- + 209 + 1 1.642 101728.6 1.0 2578 5147 7725 HBL1_DMSO_200M_050219_1,7727 HBL1_DMSO_200M_050219_1,7727,YPNPYSKHV True True YPNPYSKHV 40.757404 368.85396116972 35752305.0 7725.0 ENST00000511309.5_1_5:176730986-176733129:+|nuORF;;ENSG00000169230|ENST00000303204|PRELID1;;nc|ENSG00000169230|Q9Y255-2|PRELID1 7.3071058591206866 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7728 40.771 800.0 127970.0 25 0 27622.0 -1 0 63 1123.462708634377 3367.36629650333 3 1123.798022449017 MULTI CID FTMS 0 0 0 7725 201261.90625 1.0 0 0.0 3 3 E 1 -1 6.9897 0.0 0.0 0.20757 0.0 0.0 2711.138378465703 524.1612032525999 3235.299581718303 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20757 - 13 + 1 1.642 88545.5 0.6499999761581421 2579 5147 7725 HBL1_DMSO_200M_050219_1,7728 HBL1_DMSO_200M_050219_1,7728, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7729 40.776 273.0 386190.0 25 0 50079.0 + -1 SPCISSAPV 9 131 459.2230166691935 916.431480405187 2 459.2237731814384 MULTI CID FTMS 0 0 0 7725 200298.0 0.0337975437731495 -5 0.39111328125 4 Carbamidomethyl (C) _SPC(Carbamidomethyl (C))ISSAPV_ REV__ENSG00000064655|ENST00000327619|EYA2;REV__nc|ENSG00000064655|O00167-2|EYA2;REV__nc|ENSG00000064655|O00167-3|EYA2 34.10243960390752 0.1078313939113124 3 [PA]S{[SA]|[TG]}MSPAV 10 -1 + 34.49 0.0 0.0 3.7635 3.7635 77.563 0.0 0.0 0.0 6.367099780031886 10.599396087305522 6.367099780031886 6.367099780031886 0 0.6435078169319297 1.0 1.0941876774005248 0.0 [PA]S{[SA]|[TG]}MSPAV;[TP]SQMSPAV;{[SA]|[TG]}P{[SA]|[TG]}MSPAV;[PA]S{[SA]|[TG]}SMPAV;{[SA]|[TG]}G[TP]MSPAV;{[VA]|[{I|L}G]}DQMSPAV;{NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C))R]SPAV;[PS]TQMSPAV;{NN|[MP]|[D{I|L}]|[EV]}TQSSPAV;{[SA]|[TG]}GNQSSPAV 3.7635;3.0687;2.7549;2.6857;2.6186;2.4878;2.4718;2.4117;2.3416;2.2109 -;-;-;-;-;-;-;-;-;- 459 1 1.642 85040.4 1.0 2580 5147 7725 HBL1_DMSO_200M_050219_1,7729 HBL1_DMSO_200M_050219_1,7729,SPCISSAPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7730 40.79 800.0 176190.0 25 0 19620.0 -1 QGDGSCWSMD 10 176 579.6962530528273 1157.3779531724545 2 579.6970092654228 MULTI CID FTMS 0 0 0 7725 146133.765625 0.0380496956174392 5 -0.2848243713378906 5 Carbamidomethyl (C),Oxidation (M) _QGDGSC(Carbamidomethyl (C))WSM(Oxidation (M))D_ ENST00000550735.6_1_12:112337947-112339324:+|nuORF 8.745405648335112 0.6861838735306406 3 {[{M(Oxidation (M))|F}C]|[YS]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))YQDY 8 -1 {[{M(Oxidation (M))|F}C]|[YS]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))YQ + + 19.706 -6.9234 -0.80385 1.7027 1.7027 48.652 0.0 0.0 0.0 0.0 1.9022814763920337 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {[{M(Oxidation (M))|F}C]|[YS]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))YQDY 1.7027 - 221 + 1 1.642 108077.1 0.7900000214576721 2581 5147 7725 HBL1_DMSO_200M_050219_1,7730 HBL1_DMSO_200M_050219_1,7730,QGDGSCWSMD False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7732 40.797 170.0 361430.0 25 0 48494.0 + 26692 NYNNQSSNF 9 107 544.2255328922117 1086.4365128512234 2 544.2257568240166 MULTI CID FTMS 0 0 0 7731 322720.34375 0.2500660091579837 3 -0.1408653259277343 1 Unmodified _NYNNQSSNF_ chr12:54282662-54282800|48|694.65|0.0|26.05|+|ENST00000677249|HNRNPA1,HNRNPA1;chr12:54283967-54284240|48|13.83|0.0|20.4|+|ENST00000677375|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;ENST00000432375.1_1_6:32293532-32293889:+|nuORF;ENST00000444886.1_1_9:128358610-128358904:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1 50.855029805455786 0.0384952370514206 3 [YN]NNQ 5 4 39.526 0.0 0.0 3.6381 0.0 0.0 0.0 450.1601205995234 450.1601205995234 11.822581265925436 0.0 0.0 0.0 0 0.0 2.0 0.0 1.110924374808178 + [YN]NNQ 3.6381 + + 188 1 1.65 56224.9 1.0 2582 5148 7731 HBL1_DMSO_200M_050219_1,7732 HBL1_DMSO_200M_050219_1,7732,NYNNQSSNF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7733 40.81 800.0 207720.0 25 0 19220.0 -1 0 128 632.301870803974 1893.883783012122 3 632.6379882693291 MULTI CID FTMS 0 0 0 7731 91000.0390625 0.5273566125320486 -1 0.04052734375 2 3 [YQ][SG]AEGYSYTDAN{I|L}KK 17 -1 [YQ][SG]AE + + 78.454 13.913 2.1901 4.1425 4.1425 52.935 0.0 0.0 0.0 0.0 64.54088307913746 0.0 0.0 0 1.805462187404089 0.0 0.6747425010840047 0.2742275032520141 [YQ][SG]AEGYSYTDAN{I|L}KK 4.1425 - 1828 + 1 1.65 125481.5 0.6899999976158142 2583 5148 7731 HBL1_DMSO_200M_050219_1,7733 HBL1_DMSO_200M_050219_1,7733, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7735 40.815 110.0 604850.0 25 0 84119.0 + -1 GIMHSCYESV 10 104 394.8351138703272 1181.4835122111815 3 394.8352538943291 MULTI CID FTMS 0 0 0 7734 433555.34375 0.7770529681740197 -1 0.0202217102050781 1 Carbamidomethyl (C) _GIMHSC(Carbamidomethyl (C))YESV_ REV__ENSG00000184371|ENST00000329608|CSF1;REV__nc|ENSG00000184371|P09603-2|CSF1;REV__nc|ENSG00000184371|P09603-3|CSF1 6.630372943996041 0.695967137280542 3 {[HG]|PP}EYVS 6 -1 25.947 0.0 0.0 2.1962 0.0 0.0 0.0 506.173977869638 506.173977869638 5.899028321079953 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 {[HG]|PP}EYVS 2.1962 - 351 1 1.65 60726.3 1.0 2584 5149 7734 HBL1_DMSO_200M_050219_1,7735 HBL1_DMSO_200M_050219_1,7735,GIMHSCYESV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7736 40.82 271.0 384140.0 25 0 55483.0 11914 GLYLMSGSHDC 11 121 591.7494908778315 1181.4844288224629 2 591.7502929568291 MULTI CID FTMS 0 0 0 7734 377310.21875 0.802457752743154 -1 0.0202217102050781 2 Unmodified _GLYLMSGSHDC_ ENSG00000115808|ENST00000263918|STRN;nc|ENSG00000115808|O43815-2|STRN 13.90604991867851 0.7458848613461305 3 {[VA]|[{I|L}G]}YEGHCEV 9 7 69.237 0.0 0.0 5.8602 0.0 0.0 0.0 191.05808435611564 191.05808435611564 46.29284113160488 0.0 0.0 0.0 0 1.066901560044258 2.0 0.75 0.0 {[VA]|[{I|L}G]}YEGHCEV 5.8602 - 1525 + 1 1.65 82295.7 1.0 2585 5149 7734 HBL1_DMSO_200M_050219_1,7736 HBL1_DMSO_200M_050219_1,7736,GLYLMSGSHDC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7737 40.822 96.0 739790.0 25 0 82080.0 21861 LPPEQRQSI 9 84 534.2943387729905 1066.574124612781 2 534.2914916872978 MULTI CID FTMS 0 0 0 7734 272556.09375 0.1023549058702352 18 -0.7832145690917969 3 Unmodified _LPPEQRQSI_ ENSG00000101811|ENST00000372972|CSTF2;ENSG00000177613|ENST00000331173|CSTF2T;nc|ENSG00000101811|P33240-2|CSTF2 15.248480904072842 0.4239247793462406 3 {I|L}PPEP 5 5 63.003 0.0 0.0 5.9071 0.0 0.0 0.0 530.2815541251288 530.2815541251288 51.22038547327277 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 {I|L}PPEP 5.9071 - 32 + 1 1.65 64497.3 1.0 2586 5149 7734 HBL1_DMSO_200M_050219_1,7737 HBL1_DMSO_200M_050219_1,7737,LPPEQRQSI False True LPPEQKAER 40.822045 534.291491687298 55294888.0 7734.0 ENSG00000071564|ENST00000262965|TCF3;;nc|ENSG00000071564|P15923-3|TCF3 0.1123935182889302 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7738 40.827 258.0 627370.0 25 0 36470.0 + + 40850 QVVPISKKV 9 164 333.2183054272588 996.6330868819764 3 333.2180969119072 MULTI CID FTMS 0 0 0 7734 220226.125 0.9851928254305724 1 -0.0459861755371093 4 Unmodified _VLNVNIVKV_ nc|ENSG00000124541|Q96EU6-2|RRP36;ENSG00000124541|ENST00000244496|RRP36 10.073929032068715 0.563993802247229 3 P{I|L}KSKV 6 -1 15.212 0.0 0.0 1.5264 0.0 0.0 326.19503455571186 0.0 326.19503455571186 0.0 5.53446089419711 0.0 0.0 0 0.5 0.0 0.0 0.0 P{I|L}KSKV 1.5264 - 75 + 1 1.65 131057.9 1.0 2587 5149 7734 HBL1_DMSO_200M_050219_1,7738 HBL1_DMSO_200M_050219_1,7738,VLNVNIVKV False False QVVPISKKV 40.826829 333.2186 1189801.75 7734.0 nc|ENSG00000124541|Q96EU6-2|RRP36;;ENSG00000124541|ENST00000244496|RRP36 7.914818286895752 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7739 40.834 378.0 468660.0 25 0 26071.0 + 40358 VHQRSTGSVA 10 169 521.2768858197525 0 521.2763549685478 PEAK CID FTMS 0 0 0 7734 213217.765625 0.8500312144663696 -1 0.0202217102050781 5 Unmodified _VHQRSTGSVA_ REV__ENSG00000104774|ENST00000456935|MAN2B1;REV__ENST00000466794.5_1_19:12767171-12772081:-|nuORF;REV__nc|ENSG00000104774|O00754-2|MAN2B1 10.823927491677226 0.3685635357628707 3 VAE 3 -1 25.119 0.0 0.0 2.4141 0.0 0.0 221.09118573930976 517.2712088496289 738.3623945889387 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.7059771852360797 0.0 VAE 2.4141 - 290 + 1 1.65 141674.4 1.0 2588 5149 7734 HBL1_DMSO_200M_050219_1,7739 HBL1_DMSO_200M_050219_1,7739,VHQRSTGSVA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7740 40.838 235.0 308360.0 25 0 42549.0 36612 TAPRAMAV 8 100 408.723248028886 0 408.7235290408134 PEAK CID FTMS 0 0 0 7734 155694.25 0.5092737572245354 -2 0.0607490539550781 6 Unmodified _TAPRAMAV_ ENSG00000172053|ENST00000306125|QARS1;ENST00000470113.2_1_3:49135784-49136686:-|nuORF;nc|ENSG00000172053|P47897-2|QARS1 14.581692164780916 0.4900557725783909 3 V{[QD]|[EN]|[WG]|[KD]|[RS]}TE 5 7 8.2315 0.0 0.0 1.0095 0.0 0.0 172.0844272861262 68.0513170831664 240.13574436929252 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9247425010840048 0.0 V{[QD]|[EN]|[WG]|[KD]|[RS]}TE 1.0095 - 64 + 1 1.65 62068.2 1.0 2589 5149 7734 HBL1_DMSO_200M_050219_1,7740 HBL1_DMSO_200M_050219_1,7740,TAPRAMAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7741 40.844 319.0 385320.0 25 0 26856.0 -1 TLARAMASV 9 126 468.25248031969096 934.490407706182 2 468.2344238162041 MULTI CID FTMS 0 0 0 7734 40028.125 0.9275848035119176 2 -0.1206436157226562 7 Oxidation (M) _TLARAM(Oxidation (M))ASV_ ENST00000487304.6_1_15:69745218-69746066:+|nuORF 11.640296217721598 0.521594087909532 3 [VG][TP][YV]NSV 9 -1 [VG][TP][YV]N + + 14.335 -0.69203 -0.09475 1.534 1.534 48.546 0.0 0.0 0.0 0.0 3.85016848222528 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 [VG][TP][YV]NSV 1.534 - 339 + 1 1.65 99701.3 1.0 2590 5149 7734 HBL1_DMSO_200M_050219_1,7741 HBL1_DMSO_200M_050219_1,7741,TLARAMASV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7742 40.852 432.0 219610.0 25 0 12088.0 10287 FRPFERIM 8 146 548.2906328355662 0 548.2915527224541 PEAK CID FTMS 0 0 0 7734 124095.5 0.4407795349758235 -8 0.5191650390625 8 Unmodified _FRPFERIM_ ENSG00000112379|ENST00000251691|ARFGEF3 5.230669730166228 0.5807325378471833 3 EQNQ 4 7 25.336 0.0 0.0 2.3147 0.0 0.0 355.28938227093846 237.05176721744377 592.3411494883823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.055462187404089 EQNQ 2.3147 - 43 + 1 1.65 77201.5 1.0 2591 5149 7734 HBL1_DMSO_200M_050219_1,7742 HBL1_DMSO_200M_050219_1,7742,FRPFERIM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7743 40.856 267.0 263660.0 25 0 18277.0 + 35067 SQVALENANA 10 130 508.75473601691925 1015.4949191006384 2 508.7535888552666 MULTI CID FTMS 0 0 0 7734 107396.4765625 0.2949212757994857 -2 0.0607490539550781 9 Unmodified _SQVALENANA_ ENSG00000101361|ENST00000329276|NOP56;ENST00000470143.1_1_20:2633306-2634188:+|nuORF;ENST00000494697.5_1_20:2633306-2634895:+|nuORF 29.43715596616401 0.3072975788498757 3 {[QS]|[NT]}VA{I|L}ENA{[QG]|[NA]} 10 0 + 64.151 0.0 0.0 6.3172 6.3172 76.765 0.0 0.0 0.0 0.0505084652207159 7.269987279362624 0.0505084652207159 0.0505084652207159 0 0.4247425010840047 0.4814860601221125 0.2887254899964357 0.8556270500406937 + + {[QS]|[NT]}VA{I|L}ENA{[QG]|[NA]};{[DA]|[EG]}KA{I|L}ENA{[QG]|[NA]};{[QS]|[NT]}VA{I|L}EGGA{[QG]|[NA]};{[DA]|[EG]}KA{I|L}EGGA{[QG]|[NA]};{[SA]|[TG]}GVA{I|L}ENA{[QG]|[NA]};{[DA]|[EG]}AK{I|L}ENA{[QG]|[NA]};[VS]QA{I|L}ENA{[QG]|[NA]};{[TV]|[{I|L}S]}NA{I|L}ENA{[QG]|[NA]};[SG]AVA{I|L}ENA{[QG]|[NA]};{[DA]|[EG]}AK{I|L}EGGA{[QG]|[NA]} 6.3172;6.3122;5.4147;5.4098;5.1415;5.0882;4.6915;4.631;4.5024;4.1858 +;-;-;-;-;-;-;-;-;- + 1369 1 1.65 59564.0 1.0 2592 5149 7734 HBL1_DMSO_200M_050219_1,7743 HBL1_DMSO_200M_050219_1,7743,SQVALENANA False True SQVALENANA 40.856454 508.753588855267 2135467.0 7734.0 ENST00000494697.5_1_20:2633306-2634895:+|nuORF;;ENST00000470143.1_1_20:2633306-2634188:+|nuORF;;ENSG00000101361|ENST00000329276|NOP56 6.35663652420044 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7745 40.861 14.0 3882400.0 25 0 934280.0 + 6128 DSYPRNPTV 9 62 524.7563997899667 1047.4982466467334 2 524.7567626833916 MULTI CID FTMS 0 0 0 7744 3944218.75 0.4478822668671578 3 -0.2405433654785156 1 Unmodified _DSYPRNPTV_ ENSG00000057252|ENST00000367619|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;nc|ENSG00000057252|P35610-3|SOAT1 34.93206674587334 0.1032771302489716 3 {[DS]|[MA]|[CV]|TT}YPRNPTV 9 0 + 29.765 0.0 0.0 2.8415 2.8415 82.138 0.0 0.0 0.0 15.78517508538184 11.576987545858092 11.576987545858092 29.764575172102216 0 1.1677353201839438 0.0 0.3807196863200844 0.0 + + {[DS]|[MA]|[CV]|TT}YPRNPTV 2.8415 + + 52 + 1 1.65 47361.4 1.0 2593 5150 7744 HBL1_DMSO_200M_050219_1,7745 HBL1_DMSO_200M_050219_1,7745,DSYPRNPTV True True DSYPRNPTV 40.86086 524.756762683392 153452388.0 7744.0 nc|ENSG00000057252|P35610-2|SOAT1;;ENSG00000057252|ENST00000367619|SOAT1;;nc|ENSG00000057252|P35610-3|SOAT1 8.16895612080892 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7746 40.863 99.0 533260.0 25 0 54241.0 + 4254 DAPRVGDEV 9 88 479.2352814599626 956.4560099867252 2 479.2355224490166 MULTI CID FTMS 0 0 0 7744 481510.0 0.1338022102610131 5 -0.2884941101074219 2 Unmodified _DAPRVGDEV_ ENSG00000162783|ENST00000367577|IER5 19.361941925380144 0.3125782356748823 3 {[DA]|[EG]}[RP][VG]DEV 9 0 + 44.951 0.0 0.0 4.6998 4.6998 54.666 0.0 0.0 0.0 9.205737003855743 29.78855930516417 9.205737003855743 0.0 0 0.8807196863200843 2.0 0.0 0.0 + + {[DA]|[EG]}[RP][VG]DEV;{[DA]|[EG]}[RP][DV]GEV;{[DA]|[EG]}[RH][KC]EV;[YV][YV]EGEV;[YV][YV]ADEV;{NN|[MP]|[D{I|L}]|[EV]}[NP]RDEV;[RP]{[DA]|[EG]}[VG]DEV;[RP]{[DA]|[EG]}[DV]GEV;[YV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MWV;{NN|[MP]|[D{I|L}]|[EV]}[NP][DV]WV 4.6998;4.6998;4.2544;3.3691;3.3691;3.0543;2.0859;2.0859;1.9681;1.4086 +;-;-;-;-;-;-;-;-;- + 206 1 1.65 46028.4 1.0 2594 5150 7744 HBL1_DMSO_200M_050219_1,7746 HBL1_DMSO_200M_050219_1,7746,DAPRVGDEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7747 40.865 111.0 849460.0 25 0 141590.0 42319 VSVVLLGTR 9 110 472.3003404791165 942.5861280250332 2 472.3004028201103 MULTI CID FTMS 0 0 0 7744 412061.8125 0.1112843460388884 -2 0.0662078857421875 3 Unmodified _VSVVLLGTR_ ENST00000474806.1_1_1:93250466-93250532:-|nuORF 26.268140514670165 0.1969607489560049 3 VSVV 4 5 56.67 0.0 0.0 6.0122 0.0 0.0 0.0 555.3197725885374 555.3197725885374 32.06817498599278 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + VSVV 6.0122 + + 269 + 1 1.65 78508.8 1.0 2595 5150 7744 HBL1_DMSO_200M_050219_1,7747 HBL1_DMSO_200M_050219_1,7747,VSVVLLGTR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7748 40.868 107.0 887090.0 25 0 99270.0 + 22384 LPSSTHTI 8 107 428.2320513495968 854.4495497659935 2 428.2318603396416 MULTI CID FTMS 0 0 0 7744 382944.1875 0.4475942539456567 -1 0.0459861755371093 4 Unmodified _LPSSTHTI_ ENSG00000100225|ENST00000266087|FBXO7;ENST00000492535.1_1_22:32889009-32894514:+|nuORF;nc|ENSG00000100225|Q9Y3I1-2|FBXO7;nc|ENSG00000100225|Q9Y3I1-3|FBXO7 44.40701690623563 0.1655546087385432 3 {I|L}P{[CA]|SS}THT{I|L} 8 0 + 45.399 0.0 0.0 5.3132 5.3132 88.394 0.0 0.0 0.0 20.778888667559546 6.572757712046375 6.572757712046375 20.631758900639483 0 0.75 1.6989700043360187 1.1382104921644451 0.0 + + {I|L}P{[CA]|SS}THT{I|L};{I|L}P{[ES]|[DT]|[{I|L}C]}[QP][KG];{I|L}WWHT{I|L};[HT]{[CA]|SS}PT{I|L}{I|L};[HT]P{[CA]|SS}T{I|L}{I|L};[HT]{[CA]|SS}TP{I|L}{I|L};[HT]WW{I|L}{I|L};[PS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TP]P{I|L};[HT]{[CA]|SS}T{I|L}P{I|L};[HT][TA]AE{I|L}{I|L} 5.3132;2.8986;2.6859;1.8101;1.6482;1.4578;1.3772;1.2938;1.1055;1.0456 +;-;-;-;-;-;-;-;-;- + 169 + 1 1.65 76498.3 1.0 2596 5150 7744 HBL1_DMSO_200M_050219_1,7748 HBL1_DMSO_200M_050219_1,7748,LPSSTHTI False True LPSSTHTI 40.867605 428.231860339642 4905822.5 7744.0 nc|ENSG00000100225|Q9Y3I1-3|FBXO7;;ENST00000492535.1_1_22:32889009-32894514:+|nuORF;;ENSG00000100225|ENST00000266087|FBXO7;;nc|ENSG00000100225|Q9Y3I1-2|FBXO7 1.2760139107704165 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7749 40.871 162.0 429490.0 25 0 30017.0 29683 QPDISPNI 8 127 442.2286970176269 882.4428411020539 2 442.2288085818291 MULTI CID FTMS 0 0 0 7744 307045.71875 0.5204340591594144 4 -0.2816429138183594 5 Unmodified _QPDISPNI_ ENSG00000122966|ENST00000392521|CIT;ENST00000537607.5_1_12:120126039-120222037:-|nuORF;ENST00000545913.5_1_12:120126039-120222037:-|nuORF;nc|ENSG00000122966|O14578-3|CIT;nc|ENSG00000122966|O14578|CIT 23.1484247019978 0.5573009939494978 3 VPQV 4 7 26.79 0.0 0.0 3.0359 0.0 0.0 441.1880936428726 0.0 441.1880936428726 0.0 18.50176691263896 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.6747425010840047 VPQV 3.0359 - 198 + 1 1.65 56736.8 1.0 2597 5150 7744 HBL1_DMSO_200M_050219_1,7749 HBL1_DMSO_200M_050219_1,7749,QPDISPNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7750 40.874 188.0 539260.0 25 0 47241.0 + 36242 SYAPRRGEF 9 104 361.5171551251042 1081.5296359755127 3 361.5170776247978 MULTI CID FTMS 0 0 0 7744 252392.40625 0.0793650436461913 5 -0.2884941101074219 6 Unmodified _SYAPRRGEF_ ENSG00000197157|ENST00000354725|SND1 18.1463463914782 0.3454829746528889 3 SY{M(Oxidation (M))|F} 3 6 50.419 0.0 0.0 4.6618 0.0 0.0 0.0 681.3433631451592 681.3433631451592 38.16399754171802 0.0 0.0 0.0 0 0.4220615347360614 2.0 0.0 0.0 SY{M(Oxidation (M))|F} 4.6618 - 81 + 1 1.65 91351.7 1.0 2598 5150 7744 HBL1_DMSO_200M_050219_1,7750 HBL1_DMSO_200M_050219_1,7750,SYAPRRGEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7751 40.879 256.0 587070.0 25 0 38589.0 + -1 QVMPIMIDL 9 164 359.18969488674 1074.54725526042 3 359.1897460818291 MULTI CID FTMS 0 0 0 7744 187712.84375 0.389987681273367 -2 0.0662078857421875 7 Oxidation (M) _QVMPIM(Oxidation (M))IDL_ REV__ENSG00000197442|ENST00000359015|MAP3K5 11.494710602746466 0.5255349189887087 3 V{M(Oxidation (M))|F}KQ 4 -1 29.412 0.0 0.0 2.7372 0.0 0.0 0.0 569.2480965744659 569.2480965744659 15.43305028184122 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 V{M(Oxidation (M))|F}KQ 2.7372 - 181 + 1 1.65 128403.7 1.0 2599 5150 7744 HBL1_DMSO_200M_050219_1,7751 HBL1_DMSO_200M_050219_1,7751,QVMPIMIDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7752 40.884 245.0 501150.0 25 0 72840.0 + 14080 IAPPQSQTV 9 133 470.7585158689096 939.5024788046192 2 470.7584716677666 MULTI CID FTMS 0 0 0 7744 168284.96875 0.2240181689904138 -2 0.0662078857421875 8 Unmodified _IAPPQSQTV_ ENSG00000135249|ENST00000257700|RINT1 32.30548876998284 0.1201446275138228 3 [QP]PSQTVA{I|L} 9 5 + 38.948 0.0 0.0 4.1456 4.1456 70.506 0.0 0.0 0.0 0.5179544555799254 7.88583688212973 0.5179544555799254 0.5179544555799254 0 0.0738194166937224 0.0 1.110924374808178 0.4247425010840047 [QP]PSQTVA{I|L};[AG]PPSQTVA{I|L};[PA]GPSQTVA{I|L};{[HG]|PP}QSQTVA{I|L};{[QS]|[NT]}PPQTVA{I|L};[AG]SPPQTVA{I|L};[QP]SPQTVA{I|L};[AG]PSPQTVA{I|L};[QP]PS[AG]TVA{I|L};[PA]GSPQTVA{I|L} 4.1456;4.0905;3.9637;3.8027;3.411;3.3559;3.2461;3.191;3.1655;3.0642 -;-;-;-;-;-;-;-;-;- 597 1 1.65 95747.2 1.0 2600 5150 7744 HBL1_DMSO_200M_050219_1,7752 HBL1_DMSO_200M_050219_1,7752,IAPPQSQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7753 40.894 599.0 388550.0 25 0 12414.0 + 26640 NYADHVREM 9 189 378.8380412606545 1133.4922943821634 3 378.8372070193291 MULTI CID FTMS 0 0 0 7744 159742.875 0.8461826430630993 -1 0.0459861755371093 9 Unmodified _NYADHVREM_ ENSG00000180185|ENST00000427358|FAHD1;nc|ENSG00000180185|Q6P587-1|FAHD1;nc|ENSG00000180185|Q6P587-2|FAHD1;nc|ENSG00000180185|Q6P587-3|FAHD1 18.373094154950223 0.3393451798331396 3 GGYADHV[WM]V 10 5 + 52.622 0.0 0.0 4.6425 4.6425 54.479 0.0 0.0 0.0 3.0102999566398125 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.7302046884880937 0.0 GGYADHV[WM]V;GGYADHV{[RE]|[WV]}M;GGYADHV{[ET]|[MV]}W;GGYADHV[C(Carbamidomethyl (C))Q]K;GGYADHV[KA]{[C(Carbamidomethyl (C))G]|[NC]};GGYADH[C(Carbamidomethyl (C))Q]KV;GGYADHV{[TV]|[{I|L}S]}ES;GGYADM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KV;GGYADHV[{M(Oxidation (M))|F}T]AP;[HD]A[{I|L}P]HDAQM 4.6425;4.6425;4.3343;4.1723;3.8572;3.7602;3.6693;3.57;3.5364;3.4905 -;-;-;-;-;-;-;-;-;- 1167 + 1 1.65 185209.1 1.0 2601 5150 7744 HBL1_DMSO_200M_050219_1,7753 HBL1_DMSO_200M_050219_1,7753,NYADHVREM False True NYADHVREM 40.894176 378.837207019329 1472555.875 7744.0 nc|ENSG00000180185|Q6P587-2|FAHD1;;nc|ENSG00000180185|Q6P587-1|FAHD1;;nc|ENSG00000180185|Q6P587-3|FAHD1;;ENSG00000180185|ENST00000427358|FAHD1 6.566461086273193 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7754 40.902 415.0 260980.0 25 0 42188.0 + 35615 STYRDFQQA 9 137 558.2590504401207 0 558.2574951052666 PEAK CID FTMS 0 0 0 7744 141123.515625 0.2800237477021503 -2 0.0662078857421875 10 Unmodified _STYRDFQQA_ ENSG00000125676|ENST00000245838|THOC2 26.268140514670165 0.1442484609216422 3 Q{M(Oxidation (M))|F} 2 8 13.469 0.0 0.0 1.2085 0.0 0.0 217.10481203438684 619.2495821588499 836.3543941932367 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 Q{M(Oxidation (M))|F} 1.2085 - 95 + 1 1.65 88105.4 1.0 2602 5150 7744 HBL1_DMSO_200M_050219_1,7754 HBL1_DMSO_200M_050219_1,7754,STYRDFQQA False True STYRDFQQA 40.901605 558.257495105267 5812034.0 7744.0 ENSG00000125676|ENST00000245838|THOC2 5.589288552602132 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7755 40.91 445.0 312120.0 25 0 38921.0 + + 26938 SSAPNMEHV 9 155 485.72761816659937 0 485.7279540896416 PEAK CID FTMS 0 0 0 7744 96351.984375 1.0 0 0.0 11 Unmodified _PDVSSIHDT_ ENSG00000143476|ENST00000366991|DTL 15.847184025352805 0.2451986057151378 3 TVWQ 4 -1 11.771 0.0 0.0 1.2142 0.0 0.0 384.11727139003625 68.05134760074452 452.1686189907808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4604093769761875 TVWQ 1.2142 - 159 + 1 1.65 109826.7 1.0 2603 5150 7744 HBL1_DMSO_200M_050219_1,7755 HBL1_DMSO_200M_050219_1,7755,PDVSSIHDT False False SSAPNMEHV 40.909503 485.727954089642 982822.875 7744.0 ENSG00000143476|ENST00000366991|DTL 4.823299249013265 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7756 40.923 800.0 64962.0 25 0 11433.0 -1 0 40 1103.433956896578 3307.280041289934 3 1104.433764636517 MULTI CID FTMS 0 0 0 7744 95473.203125 0.9126804233504444 -1 0.0459861755371093 12 3 E 1 -1 4.6041 0.0 0.0 0.13921 0.0 0.0 2651.0496055827207 524.1620577447874 3175.211663327508 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.13921 - 7 + 1 1.65 48910.3 0.4699999988079071 2604 5150 7744 HBL1_DMSO_200M_050219_1,7756 HBL1_DMSO_200M_050219_1,7756, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7757 40.931 439.0 336580.0 25 0 29787.0 + -1 KQVCQLKDG 9 159 538.2818690418571 0 538.2856323122978 PEAK CID FTMS 0 0 0 7744 88973.671875 0.5480480357645564 -1 0.0459861755371093 13 Carbamidomethyl (C) _KQVC(Carbamidomethyl (C))QLKDG_ REV__ENSG00000114115|ENST00000672186|RBP1;REV__ENST00000474490.1_1_3:139236471-139237442:-|nuORF;REV__nc|ENSG00000114115|P09455|RBP1 24.020572477871973 0.1646235280836931 3 Q 1 -1 16.259 0.0 0.0 1.5131 0.0 0.0 128.09529311347814 815.3727379671735 943.4680310806516 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.4247425010840047 Q 1.5131 + + 105 1 1.65 113995.1 1.0 2605 5150 7744 HBL1_DMSO_200M_050219_1,7757 HBL1_DMSO_200M_050219_1,7757,KQVCQLKDG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7759 40.936 12.0 5725500.0 25 0 1413600.0 + 5048 DGYEQAARV 9 73 504.7401092137372 1007.4656654942744 2 504.7408630251884 MULTI CID FTMS 0 0 0 7758 5752718.0 0.0103377261508665 26 -1.62554931640625 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 71.92227651296345 0.0203558744033348 3 [DG]YEQAARV 9 0 + 74.682 0.0 0.0 7.4129 7.4129 91.927 0.0 0.0 0.0 54.23668026085308 9.754610379154428 9.754610379154428 9.208187539523747 0 1.024227503252014 1.0969100130080565 0.4247425010840047 1.0629529932484498 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YEV[NG]RV;[DG]YV[DN]ARV;[DG]YVE[NG]RV;[YT][YK]V[{M(Oxidation (M))|F}T]S 7.4129;6.4989;5.5517;4.9553;4.6565;0.95992 +;-;-;-;-;- + 176 + 1 1.651 61479.3 1.0 2606 5151 7758 HBL1_DMSO_200M_050219_1,7759 HBL1_DMSO_200M_050219_1,7759,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7760 40.938 108.0 644210.0 25 0 127860.0 -1 LMLSVSGGTV 10 98 490.26066353031456 978.5067741274293 2 490.2611877322197 MULTI CID FTMS 0 0 0 7758 411476.375 0.6743578329254245 5 -0.3289947509765625 2 Oxidation (M) _LM(Oxidation (M))LSVSGGTV_ ENST00000418814.6_2_6:71123313-71136158:+|nuORF 26.88365393820708 0.3646707531412818 3 YP[KT]SSPTV 9 -1 + 58.928 0.0 0.0 6.0222 6.0222 83.546 0.0 0.0 0.0 40.96918832492058 12.252684618815088 12.252684618815088 4.960762528683702 0 1.305462187404089 1.3979400086720375 0.3054621874040891 0.0 YP[KT]SSPTV;{I|L}{M(Oxidation (M))|F}[KT]SSPTV;{I|L}{[DS]|[MA]|[CV]|TT}{I|L}{[QG]|[NA]}{M(Oxidation (M))|F}TV;YP[KT]WWV;{I|L}{M(Oxidation (M))|F}[KT]WWV;YP[KT]S[TP]SV;{I|L}{M(Oxidation (M))|F}[KT]S[TP]SV;[DP]K{I|L}[HQ]E{I|L};[TP]AA{I|L}[HQ]E{I|L} 6.0222;5.5153;4.6466;3.0686;2.5616;2.4876;1.9806;0.75509;0.017134 -;-;-;-;-;-;-;-;- 209 + 1 1.651 59496.3 1.0 2607 5151 7758 HBL1_DMSO_200M_050219_1,7760 HBL1_DMSO_200M_050219_1,7760,LMLSVSGGTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7761 40.939 50.0 1093400.0 25 0 65347.0 + 34931 SQIRETQQL 9 94 551.7962290858846 1101.5779052385692 2 551.7967407107353 MULTI CID FTMS 0 0 0 7758 1272729.625 1.0 0 0.0 3 Unmodified _SQIRETQQL_ ENSG00000186283|ENST00000367627|TOR3A;ENST00000472001.1_1_1:179057051-179060848:+|nuORF;ENST00000495145.1_1_1:179054938-179057273:+|nuORF;nc|ENSG00000186283|Q9H497-2|TOR3A;nc|ENSG00000186283|Q9H497-3|TOR3A 57.24910588100465 0.0276051374632116 3 [AG]S{I|L}RETQQ{I|L} 10 3 + 69.104 0.0 0.0 6.2732 6.2732 88.017 0.0 0.0 0.0 15.740312677277188 16.53212513775344 15.740312677277188 9.164539485499256 0 1.024227503252014 2.0 0.4247425010840047 0.0 [AG]S{I|L}RETQQ{I|L};[AG]S{I|L}RET[AG]Q{I|L};[AG]S{I|L}RETQ[AG]{I|L};[AG]TVRETQQ{I|L};{[QS]|[NT]}{I|L}RETQQ{I|L};[AG]S{I|L}REAASQ{I|L};[AG]{I|L}[NG][KS]SQQ{I|L};[AG]TVRET[AG]Q{I|L};[AG]TVRETQ[AG]{I|L};{[QS]|[NT]}{I|L}RETQ[AG]{I|L} 6.2732;5.4412;5.4412;5.1349;4.8443;4.6984;4.509;4.3029;4.3029;4.0084 -;-;-;-;+;-;-;-;-;- + 564 1 1.651 47234.2 1.0 2608 5151 7758 HBL1_DMSO_200M_050219_1,7761 HBL1_DMSO_200M_050219_1,7761,SQIRETQQL True True SQIRETQQL 40.939142 551.796740710735 6510512.5 7758.0 nc|ENSG00000186283|Q9H497-2|TOR3A;;ENST00000472001.1_1_1:179057051-179060848:+|nuORF;;ENST00000495145.1_1_1:179054938-179057273:+|nuORF;;nc|ENSG00000186283|Q9H497-3|TOR3A;;chr1:179085893-179087917|17|11.71|0.32|5.18|+|0|TOR3A,None|1;;ENSG00000186283|ENST00000367627|TOR3A 4.931509653727214 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7762 40.941 73.0 1607600.0 25 0 249240.0 + 36163 SVVGKINKV 9 117 315.2026763285543 942.5861995858628 3 315.2024719119072 MULTI CID FTMS 0 0 0 7758 1262245.375 0.6074509686676749 -1 0.0746574401855468 4 Unmodified _SVVGKINKV_ ENSG00000169231|ENST00000368378|THBS3;ENST00000486260.5_1_1:155170782-155176189:-|nuORF;nc|ENSG00000169231|P49746-2|THBS3 54.773552608820026 0.0299037012502309 3 [VS]VGK{I|L}NKV 9 0 + 78.427 0.0 0.0 8.3204 8.3204 93.616 0.0 0.0 0.0 38.88370341666288 11.962724883926654 11.962724883926654 9.208187539523747 0 0.4247425010840047 2.0 0.0 1.336696871556164 + + [VS]VGK{I|L}NKV;[VS]VGK{I|L}GGKV;[VS]VVAKNKV;[VS]VVAKGGKV;[VS]Q{I|L}{I|L}[KA][KG];{[QN]|[E{I|L}]|[KN]}{[VA]|[{I|L}G]}K[KA][KG];[KG]E{I|L}{I|L}[KA][KG];[R{M(Oxidation (M))|F}]VRR[{I|L}P] 8.3204;7.3435;6.0313;5.0544;3.1061;0.85299;0.26704;0.18158 +;-;-;-;-;-;-;- + 413 + 1 1.651 99400.4 1.0 2609 5151 7758 HBL1_DMSO_200M_050219_1,7762 HBL1_DMSO_200M_050219_1,7762,SVVGKINKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7763 40.944 151.0 713530.0 25 0 63023.0 2764 ATNIGIPHT 9 119 462.2514874000289 922.4884218668576 2 462.2513000369072 MULTI CID FTMS 0 0 0 7758 513468.78125 0.9606626472916576 -1 0.0746574401855468 5 Unmodified _ATNIGIPHT_ ENSG00000083168|ENST00000265713|KAT6A 24.020572477871973 0.2255576514309169 3 [TA]N{I|L}PAH{[TV]|[{I|L}S]} 9 4 + 60.256 0.0 0.0 6.5319 6.5319 89.427 0.0 0.0 0.0 9.458191842299293 9.458191842299293 9.458191842299293 9.208187539523747 0 0.9247425010840048 2.0 1.385151878060192 0.0 [TA]N{I|L}PAH{[TV]|[{I|L}S]};[TA]GG{I|L}PAH{[TV]|[{I|L}S]};{[QV]|[N{I|L}]|[RA]|[KV]}QAP{I|L}N[PG];[TA]N{I|L}[VS][YR];{[QV]|[N{I|L}]|[RA]|[KV]}QAP{I|L}GG[PG];{[QV]|[N{I|L}]|[RA]|[KV]}[AG]AP{I|L}N[PG];[TA]GG{I|L}[VS][YR];{[QV]|[N{I|L}]|[RA]|[KV]}[AG]AP{I|L}GG[PG];[TA][KA][HK]N[PG];[TA]N[HV][{I|L}P][TA] 6.5319;5.5337;5.5066;5.4889;4.5084;4.5084;4.4849;3.5149;3.4257;3.21 -;-;-;-;-;-;-;-;-;- 284 + 1 1.651 86656.1 1.0 2610 5151 7758 HBL1_DMSO_200M_050219_1,7763 HBL1_DMSO_200M_050219_1,7763,ATNIGIPHT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7764 40.947 144.0 436220.0 25 0 39413.0 + 45057 YPYGDGNRSV 10 73 564.259612185255 1126.50467143731 2 564.2598754763603 MULTI CID FTMS 0 0 0 -1 0 6 Unmodified _YPYGDGNRSV_ ENSG00000156735|ENST00000287322|BAG4;ENST00000531211.1_1_8:70772071-70772629:-|nuORF;nc|ENSG00000156735|O95429-2|BAG4 20.580933911654288 0.5022139299129796 3 YPYGD[{I|L}T]GNQ 10 5 + 72.695 0.0 0.0 6.4532 6.4532 82.14 0.0 0.0 0.0 59.9311975562534 5.796444610697478 5.796444610697478 3.0102999566398125 0 0.0 2.0 0.0 0.0 YPYGD[{I|L}T]GNQ;YPYGDG[{I|L}T]NQ;YPYGD[{I|L}T]GGGQ;YPYGDG[RN][VS];YPYGDG[{I|L}T]GGQ;YPD[YG][{I|L}T]GNQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[{I|L}T]DGYNQ;YPD[YG]G[{I|L}T]NQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}T]GDGYNQ;YPY[DN][{I|L}T]NQ 6.4532;6.186;5.6396;5.433;5.3724;4.7887;4.5706;4.5215;4.3034;4.2088 -;-;-;+;-;-;-;-;-;- + 339 + 1 1.651 55094.0 1.0 2611 5151 7758 HBL1_DMSO_200M_050219_1,7764 HBL1_DMSO_200M_050219_1,7764,YPYGDGNRSV False True YPYGDGNRSV 40.946753 564.25987547636 268212320.0 7758.0 ENSG00000156735|ENST00000287322|BAG4;;ENST00000531211.1_1_8:70772071-70772629:-|nuORF;;nc|ENSG00000156735|O95429-2|BAG4 8.050258159637451 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7765 40.95 169.0 574390.0 25 0 56206.0 + 21724 LPLTQPRA 8 130 448.271664230836 894.528775528472 2 448.2746765017509 MULTI CID FTMS 0 0 0 7758 281591.25 0.1821950412907651 -10 0.6398086547851562 7 Unmodified _LPLTQPRA_ REV__ENSG00000126216|ENST00000261965|TUBGCP3;REV__nc|ENSG00000126216|Q96CW5-2|TUBGCP3;REV__nc|ENSG00000126216|Q96CW5-3|TUBGCP3 18.13498045792455 0.6430038125133779 3 {I|L} 1 -1 12.346 0.0 0.0 1.3802 0.0 0.0 763.4339096610877 0.0 763.4339096610877 0.0 0.7521226932963998 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L} 1.3802 + + 66 + 1 1.651 78344.9 1.0 2612 5151 7758 HBL1_DMSO_200M_050219_1,7765 HBL1_DMSO_200M_050219_1,7765,LPLTQPRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7766 40.953 151.0 369160.0 25 0 56495.0 + 29106 QEQYEFGVP 9 97 548.7502638806351 0 548.7507202029228 PEAK CID FTMS 0 0 0 7758 260220.421875 0.5893103803592965 -1 0.0746574401855468 8 Unmodified _QEQYEFGVP_ REV__ENSG00000215182|ENST00000621226|MUC5AC 15.847184025352805 0.2451986057151378 3 EQNE 4 -1 30.499 0.0 0.0 2.7841 0.0 0.0 356.2106585212326 236.0674837701781 592.2781422914107 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 1.1549471895720984 EQNE 2.7841 - 150 + 1 1.651 52582.1 1.0 2613 5151 7758 HBL1_DMSO_200M_050219_1,7766 HBL1_DMSO_200M_050219_1,7766,QEQYEFGVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7767 40.967 800.0 137840.0 25 0 29518.0 -1 0 55 1133.476222574996 3397.406838325188 3 1133.812060534954 MULTI CID FTMS 0 0 0 7758 196509.015625 0.4667921013907881 -1 0.0746574401855468 9 3 E 1 -1 6.9897 0.0 0.0 0.20574 0.0 0.0 2741.178369158604 524.1621187799436 3265.3404879385475 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20574 - 13 + 1 1.651 94362.0 0.6200000047683716 2614 5151 7758 HBL1_DMSO_200M_050219_1,7767 HBL1_DMSO_200M_050219_1,7767, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7768 40.974 413.0 308120.0 25 0 66340.0 + 3008 AVISHIDQT 9 123 492.26173176301097 0 492.2613403201103 PEAK CID FTMS 0 0 0 7758 179011.359375 1.0 0 0.0 10 Unmodified _AVISHIDQT_ ENSG00000134900|ENST00000376052|TPP2;ENST00000466153.5_1_13:103307300-103330663:+|nuORF;ENST00000482393.1_1_13:103309549-103320211:+|nuORF;nc|ENSG00000134900|P29144|TPP2 47.74868867922204 0.0378261468855112 3 QD{I|L}{I|L}D 5 6 19.447 0.0 0.0 1.9793 0.0 0.0 289.1646855945782 106.04158960513904 395.20627519971725 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 QD{I|L}{I|L}D 1.9793 - 318 + 1 1.651 102137.9 1.0 2615 5151 7758 HBL1_DMSO_200M_050219_1,7768 HBL1_DMSO_200M_050219_1,7768,AVISHIDQT True True AVISHIDQT 40.974311 492.262 1046963.8125 7758.0 ENST00000466153.5_1_13:103307300-103330663:+|nuORF;;nc|ENSG00000134900|P29144|TPP2;;ENSG00000134900|ENST00000376052|TPP2;;ENST00000482393.1_1_13:103309549-103320211:+|nuORF 3.0904003779093423 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7769 40.98 288.0 296990.0 25 0 14059.0 + 3829 DAIRVTKTV 9 146 334.87007053892467 1001.588382216974 3 334.8695861697197 MULTI CID FTMS 0 0 0 7758 152746.265625 0.3274020953040697 -2 0.1206436157226562 11 Unmodified _DAIRVTKTV_ ENSG00000120008|ENST00000263461|WDR11 16.565877749689598 0.3882643987948875 3 {[DA]|[EG]}{M(Oxidation (M))|F}A{I|L} 5 7 35.802 0.0 0.0 3.5745 0.0 0.0 0.0 481.2912386529906 481.2912386529906 24.20818753952375 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}A{I|L} 3.5745 - 125 + 1 1.651 70153.7 1.0 2616 5151 7758 HBL1_DMSO_200M_050219_1,7769 HBL1_DMSO_200M_050219_1,7769,DAIRVTKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7770 40.993 800.0 67533.0 25 0 8617.9 + 37375 TKTVTAKYYLK 11 62 658.3821834175525 0 658.3831054568291 PEAK CID FTMS 0 0 0 7758 136283.59375 1.0 0 0.0 12 Unmodified _TKTVTAKYYLK_ REV__chr3:109647655-109648024|10|13.1|0.0|20.32|+|1|TE_info:L1PA7,L1PA7_dup2442,L1,LINE,acceptor,+,109648024,109653403|LINC01205,None|74;REV__L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|3|1|sense;REV__nc|ENSG999|O00370|L1_ORF2 4.897010918128616 0.4761840153648597 3 VNV 3 -1 24.693 0.0 0.0 1.8781 0.0 0.0 773.4995220091299 226.0472658746704 999.5467878838002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 VNV 1.8781 - 25 + 1 1.651 52873.2 0.7599999904632568 2617 5151 7758 HBL1_DMSO_200M_050219_1,7770 HBL1_DMSO_200M_050219_1,7770,TKTVTAKYYLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7771 40.998 224.0 485830.0 25 0 48600.0 + 39129 TYHTAASTL 9 127 482.7400651727201 963.46557741224 2 482.7397338747978 MULTI CID FTMS 0 0 0 7758 132625.171875 0.1511651850075675 -2 0.1206436157226562 13 Unmodified _TYHTAASTL_ ENSG00000124641|ENST00000265350|MED20;ENST00000467535.5_1_6:41880803-41888587:-|nuORF;nc|ENSG00000288721|Q9H944-2|MED20 85.35673624503755 0.0162188719545379 3 {[WN]|[YH]}TTAAST{I|L} 9 2 + 61.337 0.0 0.0 6.3663 6.3663 85.266 0.0 0.0 0.0 4.762036441594191 23.898226411778 4.762036441594191 5.713337517843655 0 1.4564608101803795 0.0 2.0451140161145327 0.0 {[WN]|[YH]}TTAAST{I|L};[HT]YTAAST{I|L};{[VA]|[{I|L}G]}{[QC]|[C(Carbamidomethyl (C))A]}TAAST{I|L};{[QS]|[NT]}WTAAST{I|L};[AG]SWTAAST{I|L};[{I|L}T][C(Carbamidomethyl (C))Q]AAST{I|L};[{I|L}T]{[C(Carbamidomethyl (C))G]|[NC]}AAAST{I|L};{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AAAST{I|L};{[VA]|[{I|L}G]}G{[CT]|[{M(Oxidation (M))|F}G]}AAAST{I|L};[HT]AAYTST{I|L} 6.3663;5.7733;5.7381;5.3426;5.2069;5.1734;5.0437;4.9304;4.532;4.1198 -;-;-;-;-;-;-;-;-;- 2175 1 1.651 87659.3 1.0 2618 5151 7758 HBL1_DMSO_200M_050219_1,7771 HBL1_DMSO_200M_050219_1,7771,TYHTAASTL True True TYHTAASTL 40.997652 482.739733874798 4168740.0 7758.0 nc|ENSG00000288721|Q9H944-2|MED20;;ENST00000467535.5_1_6:41880803-41888587:-|nuORF;;ENSG00000124641|ENST00000265350|MED20 7.004690806070964 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7772 41.007 462.0 238090.0 25 0 10446.0 + 23777 LVCIIFYIC 9 161 543.7920835243323 1085.5696141154644 2 544.2925903201103 MULTI CID FTMS 0 0 0 7758 122413.171875 1.0 0 0.0 14 Unmodified _LVCIIFYIC_ REV__chr2:11868223-12007747|13|16.0|0.0|14.12|+|1|TE_info:MLT1H,MLT1H_dup763,ERVL-MaLR,LTR,donor,-,11867898,11868223|None,MIR3681HG|2 14.581692164780916 0.4419739649577144 3 [{I|L}V]W{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQ 7 -1 28.728 0.0 0.0 2.6464 0.0 0.0 0.0 210.08901392154533 210.08901392154533 10.198726087089504 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3494850021680094 [{I|L}V]W{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQ 2.6464 - 666 + 1 1.651 85391.9 1.0 2619 5151 7758 HBL1_DMSO_200M_050219_1,7772 HBL1_DMSO_200M_050219_1,7772,LVCIIFYIC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7773 41.021 800.0 218980.0 25 0 20387.0 13753 HRWQDNIKEED 11 138 735.3414772780368 1468.6684016228735 2 735.3428832888603 MULTI CID FTMS 0 0 0 7758 101039.8671875 0.37002486039133 -1 0.0746574401855468 15 Unmodified _HRWQDNIKEED_ ENSG00000007402|ENST00000424201|CACNA2D2;nc|ENSG00000007402|Q9NY47-3|CACNA2D2;nc|ENSG00000007402|Q9NY47-4|CACNA2D2;nc|ENSG00000007402|Q9NY47-5|CACNA2D2;nc|ENSG00000007402|Q9NY47|CACNA2D2 40.23920728925047 0.2087110615831976 3 {[ET]|[MV]}YKRAT{I|L}DEED 12 8 + 94.44 0.0 0.0 6.4303 6.4303 84.931 0.0 0.0 0.0 3.881801713828807 73.40874491738596 3.881801713828807 5.051952079062616 0 3.028659694992122 0.0 1.9049471895720984 0.2742275032520141 {[ET]|[MV]}YKRAT{I|L}DEED;EMMD{I|L}TARKYPD;{[ET]|[MV]}V[YQ]KT{I|L}DEED;[{I|L}T][HQ][TP]AT{I|L}DEED;[{I|L}T]D[YQ]KT{I|L}DEED;[{I|L}T]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHT{I|L}DEED;EMMD{I|L}TK[YQ]VPD;{[ET]|[MV]}YKR{[RE]|[WV]}DEED;EEV[KA]KEYTEED;{NN|[MP]|[D{I|L}]|[EV]}T[YQ]KT{I|L}DEED 6.4303;6.0863;5.1123;5.106;5.0758;4.7919;4.7683;4.5862;4.4149;4.4139 -;-;-;-;-;-;-;-;-;- 5641 1 1.651 124760.8 0.6200000047683716 2620 5151 7758 HBL1_DMSO_200M_050219_1,7773 HBL1_DMSO_200M_050219_1,7773,HRWQDNIKEED False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7774 41.035 800.0 150570.0 25 0 25630.0 -1 QSCFRICFEMR 11 111 775.3358368838723 1548.6571208345445 2 775.3371459841728 MULTI CID FTMS 0 0 0 7758 82142.7421875 0.5233464018896131 -1 0.0746574401855468 16 2 Carbamidomethyl (C),Oxidation (M) _QSC(Carbamidomethyl (C))FRIC(Carbamidomethyl (C))FEM(Oxidation (M))R_ ENSG00000107862|ENST00000369983|GBF1;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1 4.897010918128616 0.8520435188433833 3 {M(Oxidation (M))|F}ANQQ{M(Oxidation (M))|F}[TA]WQ 10 -1 62.472 0.0 0.0 4.034 0.0 0.0 309.1309768998472 0.0 309.1309768998472 0.0 41.53003171804024 0.0 0.0 0 0.805462187404089 0.0 0.0 1.2302046884880935 {M(Oxidation (M))|F}ANQQ{M(Oxidation (M))|F}[TA]WQ 4.034 - 5482 + 1 1.651 88431.9 0.5600000023841858 2621 5151 7758 HBL1_DMSO_200M_050219_1,7774 HBL1_DMSO_200M_050219_1,7774,QSCFRICFEMR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7776 41.039 8.2 6397000.0 25 0 1053400.0 + 4336 DASLQPRNV 9 64 500.2645818206685 998.5146107081372 2 500.2647277712822 MULTI CID FTMS 0 0 0 7775 7028440.0 0.6176581885469016 1 -0.0624542236328125 1 Unmodified _DASLQPRNV_ ENSG00000124226|ENST00000244061|RNF114;nc|ENSG00000124226|Q9Y508-2|RNF114 43.85829265575387 0.0542763391141878 3 {[DA]|[EG]}S{I|L}QRQD 8 3 69.462 0.0 0.0 6.9565 0.0 0.0 0.0 82.06695734195546 82.06695734195546 54.42471268044436 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3807196863200844 0.805462187404089 {[DA]|[EG]}S{I|L}QRQD 6.9565 - 202 + 1 1.651 47095.1 1.0 2622 5152 7775 HBL1_DMSO_200M_050219_1,7776 HBL1_DMSO_200M_050219_1,7776,DASLQPRNV True True DASLQPRNV 41.038948 500.264727771282 295416096.0 7775.0 ENSG00000124226|ENST00000244061|RNF114;;nc|ENSG00000124226|Q9Y508-2|RNF114 6.835868994394938 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7777 41.04 2.5 27400000.0 25 0 3752600.0 + 3292 AYIENAKQV 9 94 518.2767821575711 1034.539011381942 2 518.2770873904228 MULTI CID FTMS 0 0 0 7775 27610608.0 1.0 0 0.0 2 Unmodified _AYIENAKQV_ ENSG00000121022|ENST00000357849|COPS5;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 92.4914307365334 0.0139747738690111 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAKQV 9 0 + 85.474 0.0 0.0 8.262 8.262 93.552 0.0 0.0 0.0 52.0407839705436 12.109630511710208 12.109630511710208 9.208187539523747 0 1.416386562212267 2.0 0.3494850021680094 1.524227503252014 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAKQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EGGAKQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAK[AG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EGGAK[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}[DV][{M(Oxidation (M))|F}V]{I|L}{[ES]|[DT]|[{I|L}C]};{[QN]|[E{I|L}]|[KN]}[QA][{M(Oxidation (M))|F}V]{I|L}{[ES]|[DT]|[{I|L}C]};[KA]NQ[{M(Oxidation (M))|F}V]{I|L}{[ES]|[DT]|[{I|L}C]};{[QG]|[NA]}KQ[{M(Oxidation (M))|F}V]{I|L}{[ES]|[DT]|[{I|L}C]};[KA]QN[{M(Oxidation (M))|F}V]{I|L}{[ES]|[DT]|[{I|L}C]};[KA]N[AG][{M(Oxidation (M))|F}V]{I|L}{[ES]|[DT]|[{I|L}C]} 8.262;7.372;7.0576;6.1717;3.5094;3.4899;3.407;2.9462;2.5637;2.5169 +;-;-;-;-;-;-;-;-;- + 1791 + 1 1.651 59037.8 1.0 2623 5152 7775 HBL1_DMSO_200M_050219_1,7777 HBL1_DMSO_200M_050219_1,7777,AYIENAKQV True True AYIENAKQV 41.040125 518.277087390423 363118992.0 7775.0 ENSG00000121022|ENST00000357849|COPS5;;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 7.567154407501221 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7778 41.041 7.9 7431600.0 25 0 1220500.0 + 3194 AVVTQVNKV 9 81 479.2898616405653 956.5651703479308 2 479.2900268435478 MULTI CID FTMS 0 0 0 7775 8190132.5 0.3833415336202872 -1 0.1034317016601562 3 Unmodified _AVVTQVNKV_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 81.61307344734483 0.0171259190214613 3 {[VA]|[{I|L}G]}VTQVNKV 9 0 + 88.421 0.0 0.0 9.2436 9.2436 94.617 0.0 0.0 0.0 50.58037176564042 9.393105370789598 9.393105370789598 9.208187539523747 0 0.8494850021680094 2.0 0.4247425010840047 1.5044321917401078 + + {[VA]|[{I|L}G]}VTQVNKV;{[VA]|[{I|L}G]}VT[AG]VNKV;{[VA]|[{I|L}G]}VTQVGGKV;{[VA]|[{I|L}G]}VT[AG]VGGKV;{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]{I|L}V[NP];{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]{I|L}[NP]V;{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]V{I|L}[NP];{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]V[QP]V;{[VA]|[{I|L}G]}VTAQ[KA]AV;{[VA]|[{I|L}G]}{[SA]|[TG]}{I|L}Q[KA]AV 9.2436;8.281;8.281;7.3229;4.5825;4.1665;4.0837;3.6677;3.5799;3.0112 +;-;-;-;-;-;-;-;-;- + 827 + 1 1.651 52354.4 1.0 2624 5152 7775 HBL1_DMSO_200M_050219_1,7778 HBL1_DMSO_200M_050219_1,7778,AVVTQVNKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7779 41.042 9.8 4863100.0 25 0 880200.0 35319 SSSWPSPAV 9 62 459.2230166691935 916.431480405187 2 459.2235595583916 MULTI CID FTMS 0 0 0 7775 5926407.0 1.0 0 0.0 4 Unmodified _SSSWPSPAV_ ENSG00000115592|ENST00000439262|PRKAG3;nc|ENSG00000115592|Q9UGI9-2|PRKAG3 44.40701690623563 0.0526327925666318 3 [PA]S{[SA]|[TG]}MSPAV 10 4 + 56.295 0.0 0.0 6.1428 6.1428 84.059 0.0 0.0 0.0 15.070844780971058 18.41174292882627 15.070844780971058 5.144979867444221 0 1.4124379954164592 1.154901959985743 1.174742501084005 0.0 [PA]S{[SA]|[TG]}MSPAV;[PA]S{[SA]|[TG]}SMPAV;[PA]SV[CS]SPAV;[TP]{[QS]|[NT]}MSPAV;[TP]G{[SA]|[TG]}MSPAV;[TP]{[QS]|[NT]}SMPAV;[TP]G{[SA]|[TG]}SMPAV;[PA]S{[SA]|[TG]}{[CP]|[EA]}WV;[TP]M{[QS]|[NT]}SPAV;[TP]GV[CS]SPAV 6.1428;5.5814;5.0252;4.4983;4.362;3.9369;3.8006;3.7058;3.6228;3.2444 -;-;-;-;-;-;-;-;-;- 204 1 1.651 41849.2 1.0 2625 5152 7775 HBL1_DMSO_200M_050219_1,7779 HBL1_DMSO_200M_050219_1,7779,SSSWPSPAV True False MPTSQSPAV 41.042483 459.223559558392 103865344.0 7775.0 ENSG00000273841|ENST00000217893|TAF9 4.239283561706543 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7780 41.044 30.0 2318000.0 25 0 154990.0 + 30403 RAVEELHKL 9 90 365.54873203760087 1093.6243667130027 3 365.5485717654228 MULTI CID FTMS 0 0 0 7775 1558577.75 0.8562163265331348 -1 0.1034317016601562 5 Unmodified _RAVEELHKL_ ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR 41.95555342248728 0.0647214845423414 3 {[QV]|[N{I|L}]|[RA]|[KV]}VEE{I|L} 6 3 48.901 0.0 0.0 4.4715 0.0 0.0 0.0 393.22482745372105 393.22482745372105 17.754537344402905 0.0 0.0 0.0 0 1.424742501084005 0.0 0.3494850021680094 0.2742275032520141 + {[QV]|[N{I|L}]|[RA]|[KV]}VEE{I|L} 4.4715 + + 189 1 1.651 62267.1 1.0 2626 5152 7775 HBL1_DMSO_200M_050219_1,7780 HBL1_DMSO_200M_050219_1,7780,RAVEELHKL True True RAVEELHKL 41.043663 365.548571765423 7512100.0 7775.0 nc|ENSG00000047410|P12270-2|TPR;;ENSG00000047410|ENST00000367478|TPR 6.991847515106201 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7781 41.049 292.0 724590.0 25 0 139770.0 -1 0 99 1095.776085837209 3284.306428111827 3 1096.443774402142 MULTI CID FTMS 0 0 0 7775 1331851.75 0.6260524386681179 2 -0.1035537719726562 6 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QDV[YG]VTV 10 -1 24.822 0.0 0.0 0.75578 0.0 0.0 0.0 2162.741347404557 2162.741347404557 1.025932556006186 0.0 0.0 0.0 0 0.0 0.0 1.7249073637206092 0.3494850021680094 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QDV[YG]VTV 0.75578 - 2495 1 1.651 173404.0 1.0 2627 5152 7775 HBL1_DMSO_200M_050219_1,7781 HBL1_DMSO_200M_050219_1,7781, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7782 41.05 56.0 1674700.0 25 0 349460.0 + 3256 AYGPPTRAV 9 75 466.2532950808652 930.4920372285304 2 466.2533141970634 MULTI CID FTMS 0 0 0 7775 692813.6875 0.0680962689525382 -7 0.3848037719726562 7 Unmodified _AYGPPTRAV_ ENSG00000084463|ENST00000261167|WBP11 17.11289562659939 0.3734572693229295 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPPG 6 4 51.643 0.0 0.0 5.5501 0.0 0.0 0.0 385.2166231744751 385.2166231744751 41.15865011156764 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPPG 5.5501 - 70 + 1 1.651 76792.5 1.0 2628 5152 7775 HBL1_DMSO_200M_050219_1,7782 HBL1_DMSO_200M_050219_1,7782,AYGPPTRAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7783 41.053 102.0 781690.0 25 0 95953.0 + 39255 VAALGNVK 8 114 386.2395248342981 770.4644967353961 2 386.2397033572197 MULTI CID FTMS 0 0 0 7775 686738.5625 1.0 0 0.0 8 Unmodified _VAALGNKV_ ENSG00000122386|ENST00000219091|ZNF205 44.40701690623563 0.1655546087385432 3 VAA{I|L}GNVK 8 2 + 71.219 0.0 0.0 9.2437 9.2437 95.238 0.0 0.0 0.0 53.50390414314121 6.039723343538583 6.039723343538583 9.262137858390815 0 1.0067180366000754 2.0 0.0 0.3252574989159953 VAA{I|L}GNVK;VAA{I|L}GGGVK;VA[Q{I|L}]NVK;VA[Q{I|L}]GGVK 9.2437;8.0415;5.6884;4.4773 -;-;-;- 182 + 1 1.651 69803.9 1.0 2629 5152 7775 HBL1_DMSO_200M_050219_1,7783 HBL1_DMSO_200M_050219_1,7783,VAALGNKV False True VAALGNVK 41.05266 386.23970335722 3491165.5 7775.0 ENSG00000122386|ENST00000219091|ZNF205 6.121851126352946 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7784 41.064 620.0 353200.0 25 0 44240.0 -1 0 77 1108.8063878418552 3323.397334125766 3 1109.139941394329 MULTI CID FTMS 0 0 0 7775 523392.3125 1.0 0 0.0 9 3 C(Carbamidomethyl (C))YYGYW 6 -1 19.685 0.0 0.0 0.59232 0.0 0.0 1458.5221273865563 969.5339568945078 2428.056084281064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))YYGYW 0.59232 - 51 + 1 1.651 160577.8 1.0 2630 5152 7775 HBL1_DMSO_200M_050219_1,7784 HBL1_DMSO_200M_050219_1,7784, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7785 41.069 302.0 240830.0 25 0 24096.0 -1 LSMFSQNM 8 111 495.2076237831331 988.4006946330662 2 495.2101013064384 MULTI CID FTMS 0 0 0 7775 302452.75 0.4604276271190472 -16 1.01611328125 10 2 Oxidation (M) _LSM(Oxidation (M))FSQNM(Oxidation (M))_ ENSG00000206384|ENST00000358511|COL6A6;nc|ENSG00000206384|A6NMZ7-2|COL6A6 12.531546534597751 0.7257836412119636 3 V 1 -1 10.485 0.0 0.0 1.0608 0.0 0.0 871.3213316953694 0.0 871.3213316953694 0.0 2.116229369684038 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0608 - 78 + 1 1.651 56781.0 1.0 2631 5152 7775 HBL1_DMSO_200M_050219_1,7785 HBL1_DMSO_200M_050219_1,7785,LSMFSQNM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7786 41.081 677.0 305150.0 25 0 18012.0 2079 APPMPRAKENE 11 141 620.3132969374445 1238.612040941689 2 620.3138915896416 MULTI CID FTMS 0 0 0 7775 267388.375 0.2906939049130588 19 -0.9456901550292968 11 Unmodified _APPMPRAKENE_ ENSG00000156970|ENST00000287598|BUB1B;ENST00000559461.1_1_15:40475930-40477631:+|nuORF;nc|ENSG00000156970|O60566-2|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 22.736283301280096 0.5583477779825423 3 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 9 {NN|[MP]|[D{I|L}]|[EV]}PA + + 83.815 19.302 4.872 6.7669 6.7669 61.471 0.0 0.0 0.0 0.0 62.6072158606037 0.0 0.0 0 2.774227503252014 0.0 0.0 2.253083433768431 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 6.7669 - 4907 + 1 1.651 154728.6 1.0 2632 5152 7775 HBL1_DMSO_200M_050219_1,7786 HBL1_DMSO_200M_050219_1,7786,APPMPRAKENE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7787 41.089 481.0 374870.0 25 0 48354.0 + 39053 TVVHACSP 8 159 407.1984806246164 812.3824083160329 2 407.1991760134697 MULTI CID FTMS 0 0 0 7775 251710.703125 0.947941629878569 1 -0.0624542236328125 12 Unmodified _TVVHACSP_ ENST00000551276.1_1_12:56706607-56708722:-|nuORF 40.44857923139169 0.2267865117615937 3 {[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C))H]SP 7 2 + 35.383 0.0 0.0 4.3555 4.3555 80.44 0.0 0.0 0.0 0.4171846459215658 15.126924456020078 0.4171846459215658 7.66264730151866 0 0.9247425010840048 1.3010299956639813 0.6382104921644451 0.0 {[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C))H]SP;YGW[YK]P;[YG]R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{[HG]|PP}DP;{[DS]|[MA]|[CV]|TT}{[CT]|[{M(Oxidation (M))|F}G]}[YK]P;{[QD]|[EN]|[WG]|[KD]|[RS]}Y[YQ]P;[KP]Y{[HG]|PP}DP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]{[HG]|PP}DP;YGW[KP]Y;{[DS]|[MA]|[CV]|TT}[C(Carbamidomethyl (C))H]VVP 4.3555;3.4122;3.1095;2.4825;2.2527;1.6479;1.4818;1.3339;1.2674;1.2124 -;-;-;-;-;-;-;-;-;- 262 1 1.651 141232.2 1.0 2633 5152 7775 HBL1_DMSO_200M_050219_1,7787 HBL1_DMSO_200M_050219_1,7787,TVVHACSP False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7788 41.097 440.0 263690.0 25 0 53438.0 + 7479 EGTFPHLAFFH 11 105 434.88225088656367 0 434.8813049197197 PEAK CID FTMS 0 0 0 7775 135427.21875 0.4953340312427027 -32 1.4226570129394531 13 Unmodified _EGTFPHLAFFH_ REV__ENSG00000150275|ENST00000644397|PCDH15;REV__nc|ENSG00000150275|Q96QU1-3|PCDH15;REV__nc|ENSG00000150275|Q96QU1-4|PCDH15;REV__nc|ENSG00000150275|Q96QU1-6|PCDH15;REV__nc|ENSG00000150275|Q96QU1|PCDH15 5.731851221503515 0.47618401536486 3 TTAH 4 -1 13.197 0.0 0.0 1.5209 0.0 0.0 96.32741573621486 358.1984041803344 454.52581991654927 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TTAH 1.5209 - 30 + 1 1.651 96027.3 1.0 2634 5152 7775 HBL1_DMSO_200M_050219_1,7788 HBL1_DMSO_200M_050219_1,7788,EGTFPHLAFFH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7790 41.105 329.0 276360.0 25 0 34908.0 + 45217 YQYSPQNQHV 10 113 632.2907616223687 1262.5669703115373 2 632.2919189333916 MULTI CID FTMS 0 0 0 7789 276695.28125 1.0 0 0.0 1 Unmodified _YQYSPQNQHV_ ENSG00000144802|ENST00000326172|NFKBIZ;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ 71.92227651296345 0.0188747003512554 3 [TP]S[NP][QP]SYWS 11 9 + 51.382 0.0 0.0 4.0696 4.0696 77.071 0.0 0.0 0.0 4.920923673455931 4.920923673455931 4.920923673455931 4.920923673455931 0 0.9322333069283656 0.8538719643217619 1.8129529932484496 0.9361818737241736 [TP]S[NP][QP]SYWS;[YQ]YS[QP]NQ[HV];{[VA]|[{I|L}G]}D[NP][QP]SYWS;[TP]SQSW{[RE]|[WV]}WS;[YQ]YS[QP]GGQ[HV];[TP]SQM{M(Oxidation (M))|F}YV[YQ];[QP][RD][QP]SYWS;[YQ]YS[QP]N[AG][HV];[TP]MSQ{M(Oxidation (M))|F}YV[YQ];{[MG]|[TS]}P[NP][QP]SYWS 4.0696;3.6799;3.0894;3.0423;2.954;2.7328;2.7285;2.6525;2.651;2.6023 -;+;-;-;-;-;-;-;-;- + 2005 1 1.651 70020.5 1.0 2635 5153 7789 HBL1_DMSO_200M_050219_1,7790 HBL1_DMSO_200M_050219_1,7790,YQYSPQNQHV True True YQYSPQNQHV 41.10515 632.2894 2133594.5 7789.0 ENSG00000144802|ENST00000326172|NFKBIZ;;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ 8.92979383468628 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7791 41.11 241.0 460490.0 25 0 103520.0 -1 MTSQAMRLT 9 133 527.7557311639042 1053.4969093946083 2 527.7557861208916 MULTI CID FTMS 0 0 0 7789 381296.40625 1.0 0 0.0 2 Oxidation (M) _M(Oxidation (M))TSQAMRLT_ ENSG00000179168|ENST00000334928|GGN;nc|ENSG00000179168|Q86UU5-3|GGN 19.256988751693697 0.3154191944385105 3 [DG]YEQ[KT]T{I|L} 9 -1 [DG]Y + + 47.876 10.079 3.0075 4.5445 4.5445 54.157 0.0 0.0 0.0 0.0 26.82407365160424 0.0 0.0 0 1.3001648626366045 0.0 0.9423877696554316 0.3054621874040891 [DG]YEQ[KT]T{I|L} 4.5445 - 940 + 1 1.651 89511.0 1.0 2636 5153 7789 HBL1_DMSO_200M_050219_1,7791 HBL1_DMSO_200M_050219_1,7791,MTSQAMRLT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7792 41.114 205.0 362610.0 25 0 32752.0 + 28058 PPEPDAGI 8 119 398.19791497496607 794.3812770167322 2 398.1983215212822 MULTI CID FTMS 0 0 0 7789 297990.125 0.9433882968882786 -3 0.2405433654785156 3 Unmodified _PPEPDAGI_ REV__ENSG00000110237|ENST00000263674|ARHGEF17 10.183394434864962 0.7604730176254005 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[YD]|[{M(Oxidation (M))|F}M]}Q{I|L} 6 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[YD]|[{M(Oxidation (M))|F}M]}Q + + 14.604 2.0193 0.30444 1.8384 1.8384 48.726 0.0 0.0 0.0 0.0 -3.926675035687314 -3.926675035687314 0.0 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[YD]|[{M(Oxidation (M))|F}M]}Q{I|L} 1.8384 - 72 + 1 1.651 63144.8 1.0 2637 5153 7789 HBL1_DMSO_200M_050219_1,7792 HBL1_DMSO_200M_050219_1,7792,PPEPDAGI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7793 41.126 696.0 357410.0 25 0 34724.0 + 16407 IYQTSTGQY 9 216 530.7504829500441 1059.486412966888 2 530.7510864138603 MULTI CID FTMS 0 0 0 7789 269941.25 0.6921912725973712 1 -0.0410995483398437 4 Unmodified _IYQTSTGQY_ ENSG00000095794|ENST00000685392|CREM;ENST00000374711.5_1_10:35464603-35477327:+|nuORF;ENST00000472813.1_1_10:35464831-35468254:+|nuORF;ENST00000489388.5_1_10:35416112-35468254:+|nuORF;ENST00000497686.1_1_10:35456653-35468254:+|nuORF;nc|ENSG00000095794|Q03060-1|CREM;nc|ENSG00000095794|Q03060-12|CREM;nc|ENSG00000095794|Q03060-13|CREM;nc|ENSG00000095794|Q03060-14|CREM;nc|ENSG00000095794|Q03060-15|CREM;nc|ENSG00000095794|Q03060-16|CREM;nc|ENSG00000095794|Q03060-2|CREM;nc|ENSG00000095794|Q03060-20|CREM;nc|ENSG00000095794|Q03060-21|CREM;nc|ENSG00000095794|Q03060-22|CREM;nc|ENSG00000095794|Q03060-25|CREM;nc|ENSG00000095794|Q03060-26|CREM;nc|ENSG00000095794|Q03060-30|CREM;nc|ENSG00000095794|Q03060-32|CREM;nc|ENSG00000095794|Q03060-6|CREM;nc|ENSG00000095794|Q03060-7|CREM;nc|ENSG00000095794|Q03060|CREM 24.020572477871973 0.2255576514309169 3 [Y{I|L}]QT[NP]P{NN|[MP]|[D{I|L}]|[EV]} 9 5 + 28.082 0.0 0.0 2.6505 2.6505 69.461 0.0 0.0 0.0 1.8528641991523247 1.8528641991523247 1.8528641991523247 1.8528641991523247 0 0.0 1.6989700043360187 0.0 0.0 [Y{I|L}]QT[NP]P{NN|[MP]|[D{I|L}]|[EV]};[MD]R[YK]GQY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}T[NP]P{NN|[MP]|[D{I|L}]|[EV]};[EP]{M(Oxidation (M))|F}RQR{NN|[MP]|[D{I|L}]|[EV]};[AG]GTS[{I|L}T]EP{NN|[MP]|[D{I|L}]|[EV]};[AG]Y{I|L}T[NP]P{NN|[MP]|[D{I|L}]|[EV]};[AG]TGS[{I|L}T]EP{NN|[MP]|[D{I|L}]|[EV]};[Y{I|L}][AG]T[NP]P{NN|[MP]|[D{I|L}]|[EV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GT[HK]R{NN|[MP]|[D{I|L}]|[EV]};{[QG]|[NA]}TS[{I|L}T]EP{NN|[MP]|[D{I|L}]|[EV]} 2.6505;2.4757;2.3032;2.1099;1.8945;1.8156;1.7919;1.7814;1.7414;1.6461 -;-;-;-;-;-;-;-;-;- 1302 1 1.651 189421.4 1.0 2638 5153 7789 HBL1_DMSO_200M_050219_1,7793 HBL1_DMSO_200M_050219_1,7793,IYQTSTGQY False True IYQTSTGQY 41.125662 530.75108641386 1961284.75 7789.0 nc|ENSG00000095794|Q03060-32|CREM;;ENST00000472813.1_1_10:35464831-35468254:+|nuORF;;nc|ENSG00000095794|Q03060-7|CREM;;ENSG00000095794|ENST00000685392|CREM;;ENST00000374711.5_1_10:35464603-35477327:+|nuORF;;nc|ENSG00000095794|Q03060-25|CREM;;ENST00000497686.1_1_10:35456653-35468254:+|nuORF;;nc|ENSG00000095794|Q03060-1|CREM;;nc|ENSG00000095794|Q03060-16|CREM;;nc|ENSG00000095794|Q03060-13|CREM;;nc|ENSG00000095794|Q03060-21|CREM;;nc|ENSG00000095794|Q03060-15|CREM;;nc|ENSG00000095794|Q03060-26|CREM;;nc|ENSG00000095794|Q03060|CREM;;nc|ENSG00000095794|Q03060-30|CREM;;nc|ENSG00000095794|Q03060-2|CREM;;nc|ENSG00000095794|Q03060-22|CREM;;nc|ENSG00000095794|Q03060-12|CREM;;ENST00000489388.5_1_10:35416112-35468254:+|nuORF;;nc|ENSG00000095794|Q03060-14|CREM;;nc|ENSG00000095794|Q03060-20|CREM;;nc|ENSG00000095794|Q03060-6|CREM 5.666601896286011 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7794 41.132 354.0 250040.0 25 0 19283.0 + 39317 KVLNDINQA 9 142 507.7816296525629 1013.5487063719258 2 507.7816650271416 MULTI CID FTMS 0 0 0 7789 214635.578125 0.8949239931917204 1 -0.0410995483398437 5 Unmodified _VAEKAALQGQ_ ENSG00000005469|ENST00000331536|CROT;ENST00000479014.1_1_7:87005212-87011518:+|nuORF;nc|ENSG00000005469|Q9UKG9-3|CROT 14.40537977576856 0.6058337302021266 3 {[VA]|[{I|L}G]}GDVK{I|L} 7 7 15.749 0.0 0.0 1.5539 0.0 0.0 0.0 328.1268063077259 328.1268063077259 3.923808208536366 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}GDVK{I|L} 1.5539 - 1644 1 1.651 75055.7 1.0 2639 5153 7789 HBL1_DMSO_200M_050219_1,7794 HBL1_DMSO_200M_050219_1,7794,VAEKAALQGQ False False KVLNDINQA 41.132047 507.781665027142 1377383.75 7789.0 ENSG00000005469|ENST00000331536|CROT;;ENST00000479014.1_1_7:87005212-87011518:+|nuORF;;nc|ENSG00000005469|Q9UKG9-3|CROT 0.34247887134552 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7795 41.138 341.0 322250.0 25 0 35569.0 + + -1 DVYGPGKAV 9 139 453.2361989939912 0 453.2395507693291 PEAK CID FTMS 0 0 0 7789 179239.015625 0.4307752905789694 -6 0.3472785949707031 6 Oxidation (M) _DVM(Oxidation (M))VVLDV_ ENSG00000078142|ENST00000262039|PIK3C3 13.50788311687929 0.5021269579892848 3 YG[RK]D 5 -1 15.889 0.0 0.0 1.7568 0.0 0.0 214.08747823108664 68.05137811832265 282.1388563494093 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4947026752325155 0.5 YG[RK]D 1.7568 - 233 + 1 1.651 88669.6 1.0 2640 5153 7789 HBL1_DMSO_200M_050219_1,7795 HBL1_DMSO_200M_050219_1,7795,DVMVVLDV False False DVYGPGKAV 41.138219 453.239550769329 1714399.125 7789.0 ENSG00000078142|ENST00000262039|PIK3C3 4.578214565912883 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7797 41.143 41.0 1409200.0 25 0 229160.0 + 36164 SVVGKINKV 9 88 472.3003404791165 942.5861280250332 2 472.3004943728447 MULTI CID FTMS 0 0 0 7796 1297640.125 0.3504499284423413 2 -0.12200927734375 1 Unmodified _SVVGKINKV_ ENSG00000169231|ENST00000368378|THBS3;ENST00000486260.5_1_1:155170782-155176189:-|nuORF;nc|ENSG00000169231|P49746-2|THBS3 30.63653989081413 0.1413794767160703 3 VSVG[K{I|L}]NKV 9 2 + 64.28 0.0 0.0 6.8195 6.8195 83.286 0.0 0.0 0.0 45.85393343170843 7.737731077138932 7.737731077138932 3.0102999566398125 0 0.6989700043360187 2.0 0.0 0.0 VSVG[K{I|L}]NKV;VSVV[KA]NKV;VSVG[K{I|L}]GGKV;VSVV[KA]GGKV 6.8195;6.5002;5.8426;5.5233 -;-;-;- 215 + 1 1.65 49303.4 1.0 2641 5154 7796 HBL1_DMSO_200M_050219_1,7797 HBL1_DMSO_200M_050219_1,7797,SVVGKINKV False True SVVGKINKV 41.142745 472.300494372845 42679314.0 7796.0 ENST00000486260.5_1_1:155170782-155176189:-|nuORF;;nc|ENSG00000169231|P49746-2|THBS3;;ENSG00000169231|ENST00000368378|THBS3 5.350316206614177 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7798 41.145 111.0 675640.0 25 0 95330.0 22385 LPSSTHTI 8 88 428.2320513495968 854.4495497659935 2 428.2318908572197 MULTI CID FTMS 0 0 0 7796 341302.5 0.3989224614025183 3 -0.156097412109375 2 Unmodified _LPSSTHTI_ ENSG00000100225|ENST00000266087|FBXO7;ENST00000492535.1_1_22:32889009-32894514:+|nuORF;nc|ENSG00000100225|Q9Y3I1-2|FBXO7;nc|ENSG00000100225|Q9Y3I1-3|FBXO7 18.13498045792455 0.6430038125133779 3 {I|L}P 2 6 38.201 0.0 0.0 4.4708 0.0 0.0 0.0 641.2926729791624 641.2926729791624 23.11243137115873 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 + {I|L}P 4.4708 + + 29 + 1 1.65 65365.0 1.0 2642 5154 7796 HBL1_DMSO_200M_050219_1,7798 HBL1_DMSO_200M_050219_1,7798,LPSSTHTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7800 41.149 55.0 1034700.0 25 0 155960.0 + 6129 DSYPRNPTV 9 85 524.7563997899667 1047.4982466467334 2 524.7567626833916 MULTI CID FTMS 0 0 0 7799 758080.125 0.0860831171830767 8 -0.3751602172851562 1 Unmodified _DSYPRNPTV_ ENSG00000057252|ENST00000367619|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;nc|ENSG00000057252|P35610-3|SOAT1 24.020572477871973 0.2255576514309169 3 HPV 3 7 13.812 0.0 0.0 1.3186 0.0 0.0 696.3085626641147 0.0 696.3085626641147 0.0 2.4691656623156906 0.0 0.0 0 0.0 0.0 0.0 0.0 HPV 1.3186 - 104 + 1 1.65 48655.8 1.0 2643 5155 7799 HBL1_DMSO_200M_050219_1,7800 HBL1_DMSO_200M_050219_1,7800,DSYPRNPTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7801 41.154 224.0 494720.0 25 0 56990.0 + 18333 KVLERVNAV 9 114 514.3169599987359 0 514.3167602419853 PEAK CID FTMS 0 0 0 7799 418486.71875 0.7660918430940109 1 -0.1151580810546875 2 Unmodified _KVLERVNAV_ ENSG00000100911|ENST00000216802|PSME2;ENST00000442824.1_1_5:97549420-97549822:+|nuORF;ENST00000453033.1_1_13:49345602-49345743:+|nuORF;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;ENST00000559359.1_1_14:24613399-24613677:-|nuORF 26.268140514670165 0.1442484609216422 3 V{I|L}S 3 7 23.698 0.0 0.0 2.3083 0.0 0.0 128.09581855485266 596.3157442682249 724.4115628230775 0.0 0.0 0.0 0.0 0 0.75 0.0 0.0 0.0 V{I|L}S 2.3083 - 81 + 1 1.65 87174.9 1.0 2644 5155 7799 HBL1_DMSO_200M_050219_1,7801 HBL1_DMSO_200M_050219_1,7801,KVLERVNAV False True KVLERVNAV 41.153579 514.3172 59743044.0 7799.0 ENSG00000100911|ENST00000216802|PSME2;;ENST00000442824.1_1_5:97549420-97549822:+|nuORF;;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;;ENST00000559359.1_1_14:24613399-24613677:-|nuORF;;ENST00000453033.1_1_13:49345602-49345743:+|nuORF 4.835499127705892 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7802 41.156 118.0 687470.0 25 0 38054.0 + 31892 RTNSTFNQV 9 119 533.7673788724646 1065.5202048117292 2 533.7676879763603 MULTI CID FTMS 0 0 0 7799 360152.59375 0.2617798493840876 -2 0.0479507446289062 3 Unmodified _RTNSTFNQV_ ENSG00000063177|ENST00000549920|RPL18;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18 24.99096001346401 0.2132109383330889 3 [{I|L}P][{M(Oxidation (M))|F}T]T{M(Oxidation (M))|F}NQV 9 4 + 41.804 0.0 0.0 3.9234 3.9234 73.993 0.0 0.0 0.0 13.1234684152075 16.90975163625181 13.1234684152075 3.0102999566398125 0 0.2931576817365436 2.0 0.4247425010840047 0.3252574989159953 [{I|L}P][{M(Oxidation (M))|F}T]T{M(Oxidation (M))|F}NQV;[{I|L}P][YG]E{M(Oxidation (M))|F}NQV;[{I|L}P][WY]{M(Oxidation (M))|F}NQV;[{I|L}P][{M(Oxidation (M))|F}T]T{M(Oxidation (M))|F}GGQV;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]T{M(Oxidation (M))|F}NQV;[{I|L}P][YG]E{M(Oxidation (M))|F}GGQV;[{I|L}P][WY]{M(Oxidation (M))|F}GGQV;[{I|L}P][{M(Oxidation (M))|F}T]T{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))K];[{I|L}P][YG]E{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))K];{[{M(Oxidation (M))|F}D]|MM}[VP]T{M(Oxidation (M))|F}NQV 3.9234;3.6409;3.3645;2.7539;2.6359;2.4714;2.19;2.1483;1.8657;1.8068 -;-;-;-;-;-;-;-;-;- 301 1 1.65 70043.2 1.0 2645 5155 7799 HBL1_DMSO_200M_050219_1,7802 HBL1_DMSO_200M_050219_1,7802,RTNSTFNQV False True RTNSTFNQV 41.156049 533.76768797636 14668018.0 7799.0 ENST00000547892.1_1_19:49120227-49120731:-|nuORF;;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;;nc|ENSG00000063177|Q07020-2|RPL18;;ENSG00000063177|ENST00000549920|RPL18;;ENST00000552705.5_1_19:49119841-49122400:-|nuORF 6.324944496154785 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7803 41.168 661.0 192940.0 25 0 27966.0 -1 QGDGSCWSMD 10 155 579.6965165878258 1157.3784802424516 2 579.6965820193291 MULTI CID FTMS 0 0 0 7799 283487.1875 0.8542622285461913 1 -0.1151580810546875 4 Carbamidomethyl (C),Oxidation (M) _QGDGSC(Carbamidomethyl (C))WSM(Oxidation (M))D_ ENST00000550735.6_1_12:112337947-112339324:+|nuORF 8.745405648335112 0.6861838735306406 3 DYYY 4 -1 35.943 0.0 0.0 3.1056 0.0 0.0 535.1523304669937 0.0 535.1523304669937 0.0 23.432145930913112 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 DYYY 3.1056 - 554 1 1.65 98051.3 1.0 2646 5155 7799 HBL1_DMSO_200M_050219_1,7803 HBL1_DMSO_200M_050219_1,7803,QGDGSCWSMD False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7804 41.173 300.0 385320.0 25 0 28869.0 + 36243 SYAPRRGEF 9 121 361.5171551251042 1081.5296359755127 3 361.5174133181572 MULTI CID FTMS 0 0 0 7799 262587.9375 0.0825710386072713 10 -0.4122390747070312 5 Unmodified _SYAPRRGEF_ ENSG00000197157|ENST00000354725|SND1 18.1463463914782 0.3454829746528889 3 SYA{M(Oxidation (M))|F}[RP]Q 7 5 59.825 0.0 0.0 5.5315 0.0 0.0 0.0 229.0892733209594 229.0892733209594 48.23145724778165 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 1.1549471895720984 SYA{M(Oxidation (M))|F}[RP]Q 5.5315 - 111 + 1 1.65 97148.6 1.0 2647 5155 7799 HBL1_DMSO_200M_050219_1,7804 HBL1_DMSO_200M_050219_1,7804,SYAPRRGEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7805 41.186 765.0 156640.0 25 0 10725.0 + + 14310 SVEGEGEEEGEEY 13 141 721.7754925156522 1441.5364320981043 2 721.7757446169853 MULTI CID FTMS 0 0 0 7799 234754.125 1.0 0 0.0 6 Unmodified _IEMEYFSCEEY_ ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000123416|ENST00000336023|TUBA1B;nc|ENSG00000123416|P68363-2|TUBA1B 18.1463463914782 0.6576820063886638 3 EEGEGEWEWEY 11 -1 + 76.495 0.0 0.0 5.3065 5.3065 73.653 0.0 0.0 0.0 2.882953879644191 9.797513843253569 2.882953879644191 0.2237030067185799 0 0.7429928190999391 0.8538719643217619 3.5356668758921828 0.0 EEGEGEWEWEY;EEGEEGWEWEY;EEGGEEWEWEY;EEGEGEEWWEY;EEGEEGEWWEY;EEGGEEEWWEY;{[DA]|[EG]}EEGEWEWEY;EEGEGEWWEEY;{[DA]|[EG]}EEEGWEWEY;EEGEEGWWEEY 5.3065;5.291;5.2759;5.1599;5.1444;5.1294;5.1065;5.0976;5.091;5.0821 -;-;-;-;-;-;-;-;-;- 26239 1 1.65 88145.0 1.0 2648 5155 7799 HBL1_DMSO_200M_050219_1,7805 HBL1_DMSO_200M_050219_1,7805,IEMEYFSCEEY False False SVEGEGEEEGEEY 41.186318 721.775744616985 1501963.625 7799.0 ENSG00000167552|ENST00000301071|TUBA1A;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;ENSG00000123416|ENST00000336023|TUBA1B;;nc|ENSG00000123416|P68363-2|TUBA1B 3.786222696304321 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7806 41.19 190.0 452100.0 25 0 65130.0 + 36362 SYPTKQAAL 9 104 489.7658283264055 0 489.7640563845634 PEAK CID FTMS 0 0 0 7799 202030.890625 0.5040051917694441 -1 0.0068511962890625 7 Unmodified _SYPTKQAAL_ ENSG00000134294|ENST00000256689|SLC38A2;ENST00000553252.1_1_12:46764947-46766316:-|nuORF 19.256988751693697 0.2078072434435185 3 P 1 8 9.732 0.0 0.0 0.99558 0.0 0.0 250.09367388053164 627.3487032525999 877.4423771331315 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + P 0.99558 + + 150 + 1 1.65 68629.9 1.0 2649 5155 7799 HBL1_DMSO_200M_050219_1,7806 HBL1_DMSO_200M_050219_1,7806,SYPTKQAAL False True SYPTKQAAL 41.189968 489.764056384563 6538102.5 7799.0 ENST00000553252.1_1_12:46764947-46766316:-|nuORF;;ENSG00000134294|ENST00000256689|SLC38A2 6.595066070556641 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7807 41.204 800.0 170280.0 25 0 34634.0 + 35616 STYRDFQQA 9 167 558.2590504401207 0 558.2592651247978 PEAK CID FTMS 0 0 0 7799 160950.984375 0.319366319932109 3 -0.2165679931640625 8 Unmodified _STYRDFQQA_ ENSG00000125676|ENST00000245838|THOC2 15.248480904072842 0.2520662914010398 3 Q{M(Oxidation (M))|F} 2 8 13.366 0.0 0.0 1.1992 0.0 0.0 217.1068778902145 619.2514742486936 836.3583521389082 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 Q{M(Oxidation (M))|F} 1.1992 - 149 + 1 1.65 108016.5 0.9399999976158142 2650 5155 7799 HBL1_DMSO_200M_050219_1,7807 HBL1_DMSO_200M_050219_1,7807,STYRDFQQA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7808 41.218 800.0 268440.0 25 0 31271.0 + 44826 YPNPYSKHV 9 225 368.8544182922333 1103.5414254768998 3 368.8540527224541 MULTI CID FTMS 0 0 0 7799 141808.703125 0.3076149690888842 4 -0.2621726989746094 9 Unmodified _YPNPYSKHV_ ENSG00000169230|ENST00000303204|PRELID1;ENST00000511309.5_1_5:176730986-176733129:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1 5.731851221503515 0.7145881442174411 3 {M(Oxidation (M))|F} 1 9 12.474 0.0 0.0 1.1304 0.0 0.0 938.462047280414 0.0 938.462047280414 0.0 2.7965400545350594 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1304 - 102 + 1 1.65 172030.6 0.6299999952316284 2651 5155 7799 HBL1_DMSO_200M_050219_1,7808 HBL1_DMSO_200M_050219_1,7808,YPNPYSKHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7809 41.233 800.0 145380.0 25 0 13971.0 + 40837 VLNFLSFTF 9 169 544.2938483822246 0 544.2258178591728 PEAK CID FTMS 0 0 0 7799 42842.51953125 0.7987194632870522 -1 0.0068511962890625 10 Unmodified _VLNFLSFTF_ REV__ENSG00000166206|ENST00000311550|GABRB3;REV__nc|ENSG00000166206|P28472-2|GABRB3;REV__nc|ENSG00000166206|P28472-3|GABRB3;REV__nc|ENSG00000166206|P28472-4|GABRB3 15.847184025352805 0.2451986057151378 3 N 1 -1 4.877 0.0 0.0 0.44884 0.0 0.0 837.4611576025367 132.0456484430297 969.5068060455663 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.1382104921644452 N 0.44884 + + 44 + 1 1.65 89926.4 0.8799999952316284 2652 5155 7799 HBL1_DMSO_200M_050219_1,7809 HBL1_DMSO_200M_050219_1,7809,VLNFLSFTF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7810 41.246 800.0 75499.0 25 0 6853.5 27889 PLSLRSYLVS 10 110 567.8308593630791 0 567.8308593630791 PEAK CID FTMS 0 0 0 -1 0 11 Unmodified _PLSLRSYLVS_ ENST00000585457.5_1_17:42253853-42254417:-|nuORF 3.944395688203298 0.3961065659209837 3 H 1 10 3.9794 0.0 0.0 0.35103 0.0 0.0 768.4485706775268 225.1246737115844 993.5732443891112 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.35103 - 13 + 1 1.65 54059.8 0.6899999976158142 2653 5155 7799 HBL1_DMSO_200M_050219_1,7810 HBL1_DMSO_200M_050219_1,7810,PLSLRSYLVS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7811 41.26 800.0 137690.0 25 0 9000.0 39041 TVTVYHQPA 9 152 508.2654701570336 1014.5163873808672 2 508.7568237185478 MULTI CID FTMS 0 0 0 -1 0 12 Unmodified _TVTVYHQPA_ ENSG00000132680|ENST00000368321|KHDC4;ENST00000466713.1_1_1:155896424-155904164:-|nuORF;nc|ENSG00000132680|Q7Z7F0-2|KHDC4;nc|ENSG00000132680|Q7Z7F0-3|KHDC4;nc|ENSG00000132680|Q7Z7F0-4|KHDC4 11.640296217721598 0.521594087909532 3 {[TV]|[{I|L}S]}T 3 6 19.212 0.0 0.0 1.8937 0.0 0.0 0.0 710.3299914670578 710.3299914670578 8.498256904067325 0.0 0.0 0.0 0 0.0 1.154901959985743 0.4361818737241735 0.0 + {[TV]|[{I|L}S]}T 1.8937 + + 521 1 1.65 92066.3 0.6399999856948853 2654 5155 7799 HBL1_DMSO_200M_050219_1,7811 HBL1_DMSO_200M_050219_1,7811,TVTVYHQPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7813 41.265 42.0 1272500.0 25 0 255560.0 + 5049 DGYEQAARV 9 80 504.7401092137372 1007.4656654942744 2 504.7409545779228 MULTI CID FTMS 0 0 0 7812 1278908.375 0.0022982187815915 31 -2.069580078125 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 36.12702656103203 0.0967173616627612 3 [DG]YEQAA[RV] 9 0 [DG]Y + + 43.773 7.0212 2.0952 4.3449 4.3449 53.543 0.0 0.0 0.0 0.0 32.31939364284848 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.7302046884880937 + + [DG]YEQAA[RV] 4.3449 + + 118 + 1 1.65 46662.8 1.0 2655 5156 7812 HBL1_DMSO_200M_050219_1,7813 HBL1_DMSO_200M_050219_1,7813,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7814 41.269 267.0 177190.0 25 0 10579.0 + 45058 YPYGDGNRSV 10 87 564.259612185255 1126.50467143731 2 564.2602416872978 MULTI CID FTMS 0 0 0 7812 64599.734375 0.1114090816883287 2 -0.101409912109375 2 Unmodified _YPYGDGNRSV_ ENSG00000156735|ENST00000287322|BAG4;ENST00000531211.1_1_8:70772071-70772629:-|nuORF;nc|ENSG00000156735|O95429-2|BAG4 13.614867670302877 0.6190977555336379 3 YPYGD 5 5 59.821 0.0 0.0 5.3103 0.0 0.0 0.0 528.2533663385374 528.2533663385374 50.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YPYGD 5.3103 + + 70 + 1 1.65 41019.1 1.0 2656 5156 7812 HBL1_DMSO_200M_050219_1,7814 HBL1_DMSO_200M_050219_1,7814,YPYGDGNRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7815 41.271 19.0 3593300.0 25 0 645220.0 + 31960 RVEEAIHPV 9 80 525.2904313879149 1048.5663098426296 2 525.2905761599541 MULTI CID FTMS 0 0 0 7812 2947911.25 0.7512831355495876 -1 0.1151580810546875 3 Unmodified _RVEEAIHPV_ ENST00000367590.8_1_1:180601192-180601402:+|nuORF 32.78568957990786 0.1150597335874693 3 V[HN]{I|L}H[VP] 7 4 35.59 0.0 0.0 3.3942 0.0 0.0 234.11236769843907 0.0 234.11236769843907 0.0 23.53871964321762 0.0 0.0 0 0.8807196863200843 0.0 0.0 1.079689690656103 V[HN]{I|L}H[VP] 3.3942 - 79 1 1.65 59548.7 1.0 2657 5156 7812 HBL1_DMSO_200M_050219_1,7815 HBL1_DMSO_200M_050219_1,7815,RVEEAIHPV True True RVEEAIHPV 41.270642 525.290576159954 47469264.0 7812.0 ENST00000367590.8_1_1:180601192-180601402:+|nuORF 7.244405587514241 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7816 41.272 35.0 2006900.0 25 0 241020.0 + 12899 GWGPPPSL 8 85 405.710745005675 809.40693707815 2 405.7107726931572 MULTI CID FTMS 0 0 0 7812 1857941.875 0.3741237367391337 -3 0.1631088256835937 4 Unmodified _GWGPPPSL_ REV__nc|ENSG00000180068|P47883|OR3A4P 28.17323086031832 0.4514957916281387 3 YHKYS{I|L} 6 -1 + 67.159 0.0 0.0 8.2973 8.2973 96.85 0.0 0.0 0.0 59.08661594732408 13.812281309285623 13.812281309285623 24.24865027867405 0 1.1549471895720984 1.3979400086720375 1.0994850021680094 0.0 YHKYS{I|L};{[WN]|[YH]}KYS{I|L};{[WN]|[YH]}K{[TV]|[{I|L}S]}Y;[HK]YYS{I|L};[YK]HYS{I|L};[HK]Y{[TV]|[{I|L}S]}Y;[YK]H{[TV]|[{I|L}S]}Y;{[TV]|[{I|L}S]}[YK]HY;[YK]{[TV]|[{I|L}S]}HY;{[{M(Oxidation (M))|F}C]|[YS]}[K{I|L}]HY 8.2973;5.3014;4.6554;2.1143;1.5248;1.4683;0.8788;0.82226;0.72444;0.35252 -;-;-;-;-;-;-;-;-;- 113 + 1 1.65 59443.7 1.0 2658 5156 7812 HBL1_DMSO_200M_050219_1,7816 HBL1_DMSO_200M_050219_1,7816,GWGPPPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7817 41.275 161.0 815360.0 25 0 73269.0 + -1 LLMPVPPL 8 117 448.271664230836 894.528775528472 2 448.2726013064384 MULTI CID FTMS 0 0 0 7812 562786.3125 0.364133741527178 -5 0.3289947509765625 5 Oxidation (M) _LLM(Oxidation (M))PVPPL_ REV__nc|ENSG00000102554|Q13887-3|KLF5 32.45364647766026 0.3613649037604678 3 {[DA]|[EG]}RKPPV{I|L} 8 -1 + 45.951 0.0 0.0 5.1369 5.1369 81.416 0.0 0.0 0.0 9.358500049694534 36.19703367779086 9.358500049694534 6.020599913279625 0 0.5138793319624578 1.0457574905606752 0.0 0.0 {[DA]|[EG]}RKPPV{I|L};{[DA]|[EG]}RKPVP{I|L};{[DA]|[EG]}RKVPP{I|L};{[SA]|[TG]}RR[RH]{I|L} 5.1369;4.4638;3.3759;0.34653 -;-;-;- 226 1 1.65 106091.6 1.0 2659 5156 7812 HBL1_DMSO_200M_050219_1,7817 HBL1_DMSO_200M_050219_1,7817,LLMPVPPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7818 41.277 99.0 540550.0 25 0 37208.0 14067 IANQDPIAV 9 90 470.7585158689096 939.5024788046192 2 470.7587463259697 MULTI CID FTMS 0 0 0 7812 503791.21875 0.6706385437518407 4 -0.1715621948242187 6 Unmodified _IANQDPIAV_ ENSG00000157168|ENST00000405005|NRG1;nc|ENSG00000157168|Q02297-11|NRG1;nc|ENSG00000157168|Q02297-2|NRG1;nc|ENSG00000157168|Q02297-6|NRG1;nc|ENSG00000157168|Q02297-7|NRG1 28.486842064014134 0.1687311288560894 3 [{I|L}A]NQ[DP]V[{I|L}A] 9 2 + 38.847 0.0 0.0 4.1348 4.1348 82.063 0.0 0.0 0.0 0.2145269011161659 17.956349637772753 0.2145269011161659 9.208187539523756 0 0.0 1.6989700043360187 0.4247425010840047 0.9247425010840048 [{I|L}A]NQ[DP]V[{I|L}A];[{I|L}A]GGQ[DP]V[{I|L}A];[{I|L}A]N[AG][DP]V[{I|L}A];[PA][PG]SQTV[{I|L}A];[{I|L}A]N[DG][PA]V[{I|L}A];{[VA]|[{I|L}G]}QQ[DP]V[{I|L}A];{[VA]|[{I|L}G]}GAQ[DP]V[{I|L}A];{[QV]|[N{I|L}]|[RA]|[KV]}AQ[DP]V[{I|L}A];{[QV]|[N{I|L}]|[RA]|[KV]}[Y{M(Oxidation (M))|F}]TV[{I|L}A];[{I|L}A]N[PG]{[DA]|[EG]}V[{I|L}A] 4.1348;3.1547;3.1547;2.9979;2.5152;2.4698;2.4211;2.3454;2.2682;2.1948 -;-;-;-;-;-;-;-;-;- 692 1 1.65 45807.4 1.0 2660 5156 7812 HBL1_DMSO_200M_050219_1,7818 HBL1_DMSO_200M_050219_1,7818,IANQDPIAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7819 41.279 59.0 843330.0 25 0 53269.0 + 29795 QQDIKVSMC 9 86 526.2489703404482 1050.4833877476965 2 526.7507202029228 MULTI CID FTMS 0 0 0 7812 486333.53125 0.9851298166694582 -1 0.1151580810546875 7 Unmodified _QQDIKVSMC_ ENSG00000100485|ENST00000216373|SOS2;nc|ENSG00000100485|Q07890-2|SOS2 34.10243960390752 0.1078313939113124 3 PVQ[RN]PV 7 8 27.936 0.0 0.0 2.6594 0.0 0.0 242.04034683148376 0.0 242.04034683148376 0.0 14.748621341342536 0.0 0.0 0 0.5 0.0 0.0 0.6694451763165201 PVQ[RN]PV 2.6594 - 154 + 1 1.65 49761.1 1.0 2661 5156 7812 HBL1_DMSO_200M_050219_1,7819 HBL1_DMSO_200M_050219_1,7819,QQDIKVSMC True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7820 41.281 95.0 524460.0 25 0 61647.0 + 39127 TYHASGAEL 9 75 474.724812731067 947.435072528934 2 474.7256042361259 MULTI CID FTMS 0 0 0 7812 377060.15625 0.7185684212883382 -1 0.1151580810546875 8 Unmodified _TYHASGAEL_ ENSG00000198911|ENST00000361204|SREBF2 15.847184025352805 0.4077185912009129 3 [HA][YT][SG]AE{I|L} 9 4 [HA][YT][SG]AE + + 15.485 4.3708 0.53541 1.6344 1.6344 48.613 0.0 0.0 0.0 0.0 -12.408037477650636 -12.408037477650636 0.0 0 0.0 0.0 0.0 0.0 [HA][YT][SG]AE{I|L} 1.6344 - 41 + 1 1.65 45332.0 1.0 2662 5156 7812 HBL1_DMSO_200M_050219_1,7820 HBL1_DMSO_200M_050219_1,7820,TYHASGAEL False True TYHASGAEL 41.280682 474.725604236126 2979201.75 7812.0 ENSG00000198911|ENST00000361204|SREBF2 2.0578827932477 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7821 41.294 790.0 155530.0 25 0 12209.0 + 41838 VPYGNAQEQNV 11 155 609.7908139524995 1217.567074971799 2 609.7905761599541 MULTI CID FTMS 0 0 0 7812 205159.5625 0.819277072349109 -3 0.1631088256835937 9 Unmodified _VPYGNAQEQNV_ ENSG00000216490|ENST00000407280|IFI30;ENST00000600463.1_1_19:18285864-18288180:+|nuORF 70.33199760932243 0.0314424197347918 3 DQEQANGQNV 10 7 68.006 0.0 0.0 5.5854 0.0 0.0 116.09548838050326 0.0 116.09548838050326 0.0 40.04677245306908 0.0 0.0 0 0.0 0.0 0.6549471895720984 2.309894379144197 DQEQANGQNV 5.5854 - 4460 + 1 1.65 99459.8 1.0 2663 5156 7812 HBL1_DMSO_200M_050219_1,7821 HBL1_DMSO_200M_050219_1,7821,VPYGNAQEQNV True True VPYGNAQEQNV 41.294357 609.790576159954 1720411.25 7812.0 ENSG00000216490|ENST00000407280|IFI30;;ENST00000600463.1_1_19:18285864-18288180:+|nuORF 7.201196034749349 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7823 41.299 4.3 10572000.0 25 0 1786200.0 + 3195 AVVTQVNKV 9 66 479.2898616405653 956.5651703479308 2 479.2900878787041 MULTI CID FTMS 0 0 0 7822 14140950.0 0.6618712773997002 4 -0.1620864868164062 1 Unmodified _AVVTQVNKV_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 36.12702656103203 0.0967173616627612 3 {[VA]|[{I|L}G]}VTQVNKV 9 0 + 68.492 0.0 0.0 7.1602 7.1602 91.648 0.0 0.0 0.0 43.23200270188551 9.362915595803017 9.362915595803017 9.208187539523756 0 0.7302046884880937 2.0 0.0 0.4247425010840047 + + {[VA]|[{I|L}G]}VTQVNKV;{[VA]|[{I|L}G]}VTQVGGKV;{[VA]|[{I|L}G]}VT[AG]VNKV;{[VA]|[{I|L}G]}VT[AG]VGGKV 7.1602;6.1976;6.1976;5.2395 +;-;-;- + 162 + 1 1.648 41181.0 1.0 2664 5157 7822 HBL1_DMSO_200M_050219_1,7823 HBL1_DMSO_200M_050219_1,7823,AVVTQVNKV True True AVVTQVNKV 41.298596 479.290087878704 291228480.0 7822.0 ENST00000526368.1_1_11:62530297-62533976:+|nuORF;;ENSG00000168002|ENST00000301788|POLR2G;;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 8.664763609568277 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7824 41.3 16.0 2432800.0 25 0 438370.0 + -1 SPCISSAPV 9 73 459.2230166691935 916.431480405187 2 459.2234069705009 MULTI CID FTMS 0 0 0 7822 3096536.75 0.5224981595087884 5 -0.2060470581054687 2 Carbamidomethyl (C) _SPC(Carbamidomethyl (C))ISSAPV_ REV__ENSG00000064655|ENST00000327619|EYA2;REV__nc|ENSG00000064655|O00167-2|EYA2;REV__nc|ENSG00000064655|O00167-3|EYA2 16.942295170755138 0.3780752226737986 3 [PS]A{[SA]|[TG]}SM 7 -1 34.926 0.0 0.0 3.8111 0.0 0.0 0.0 282.14532252848704 282.14532252848704 20.32206343782676 0.0 0.0 0.0 0 0.5 0.9208187539523752 0.9247425010840048 0.0 [PS]A{[SA]|[TG]}SM 3.8111 - 90 1 1.648 37725.2 1.0 2665 5157 7822 HBL1_DMSO_200M_050219_1,7824 HBL1_DMSO_200M_050219_1,7824,SPCISSAPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7825 41.301 27.0 2019200.0 25 0 180690.0 + 3293 AYIENAKQV 9 96 518.2767821575711 1034.539011381942 2 518.2769042849541 MULTI CID FTMS 0 0 0 7822 1654387.75 0.0599185555783487 5 -0.2060470581054687 3 Unmodified _AYIENAKQV_ ENSG00000121022|ENST00000357849|COPS5;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 43.85829265575387 0.0542763391141878 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAKQV 9 0 + 53.967 0.0 0.0 5.2165 5.2165 85.092 0.0 0.0 0.0 41.74848700962994 2.852646311626941 2.852646311626941 9.208187539523747 0 0.4247425010840047 2.0 0.3807196863200844 0.9957416651753048 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAKQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EGGAKQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAK[AG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EGGAK[AG]V;[KA]NQ[{M(Oxidation (M))|F}V]{I|L}{[ES]|[DT]|[{I|L}C]};{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}[{M(Oxidation (M))|F}V]{I|L}{[ES]|[DT]|[{I|L}C]};{[VA]|[{I|L}G]}[RD][{M(Oxidation (M))|F}V]{I|L}{[ES]|[DT]|[{I|L}C]};[KA]N[AG][{M(Oxidation (M))|F}V]{I|L}{[ES]|[DT]|[{I|L}C]};[KA]GGQ[{M(Oxidation (M))|F}V]{I|L}{[ES]|[DT]|[{I|L}C]} 5.2165;4.3264;4.1123;3.2265;1.5184;1.007;0.91979;0.62831;0.62831 +;-;-;-;-;-;-;-;- + 267 + 1 1.648 50221.5 1.0 2666 5157 7822 HBL1_DMSO_200M_050219_1,7825 HBL1_DMSO_200M_050219_1,7825,AYIENAKQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7826 41.305 234.0 483730.0 25 0 27282.0 + 16463 KAIRDGVIEA 10 132 536.3112919710273 1070.6080310088546 2 536.3114501833916 MULTI CID FTMS 0 0 0 7822 363558.125 0.4105223428609256 -2 0.1492462158203125 4 Unmodified _KAIRDGVIEA_ ENSG00000108344|ENST00000264639|PSMD3;ENST00000415039.7_1_17:38140716-38152959:+|nuORF;nc|ENSG00000108344|O43242-2|PSMD3 30.354368406336206 0.2866892579571958 3 R{I|L}EA 4 6 37.361 0.0 0.0 3.4897 0.0 0.0 583.343553611525 0.0 583.343553611525 0.0 13.376641214447638 0.0 0.0 0 0.535666875892183 0.0 0.0 0.7302046884880937 R{I|L}EA 3.4897 - 182 1 1.648 88238.4 1.0 2667 5157 7822 HBL1_DMSO_200M_050219_1,7826 HBL1_DMSO_200M_050219_1,7826,KAIRDGVIEA False True KAIRDGVIEA 41.305351 536.311450183392 9424071.0 7822.0 ENST00000415039.7_1_17:38140716-38152959:+|nuORF;;ENSG00000108344|ENST00000264639|PSMD3;;nc|ENSG00000108344|O43242-2|PSMD3 4.749136368433635 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7827 41.308 132.0 467790.0 25 0 47398.0 + 4337 DASLQPRNV 9 102 500.2645818206685 998.5146107081372 2 500.2647582888603 MULTI CID FTMS 0 0 0 7822 322863.90625 0.028373228693928 6 -0.2259140014648437 5 Unmodified _DASLQPRNV_ ENSG00000124226|ENST00000244061|RNF114;nc|ENSG00000124226|Q9Y508-2|RNF114 41.8396318013385 0.0653578398400075 3 {[DA]|[EG]}S{I|L}{I|L}N 6 4 59.213 0.0 0.0 5.9301 0.0 0.0 0.0 382.1841219537719 382.1841219537719 41.69907812025782 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.4247425010840047 {[DA]|[EG]}S{I|L}{I|L}N 5.9301 - 325 + 1 1.648 51508.4 1.0 2668 5157 7822 HBL1_DMSO_200M_050219_1,7827 HBL1_DMSO_200M_050219_1,7827,DASLQPRNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7828 41.32 697.0 251320.0 25 0 12332.0 3531 CVFRSTVQR 9 207 548.2906328355662 0 548.2892944216728 PEAK CID FTMS 0 0 0 7822 281536.4375 1.0 0 0.0 6 Unmodified _CVFRSTVQR_ ENSG00000239605|ENST00000445927|STPG4;nc|ENSG00000239605|Q8N801-2|STPG4 15.847184025352805 0.2451986057151378 3 A{M(Oxidation (M))|F}EQ 4 7 22.053 0.0 0.0 2.0147 0.0 0.0 131.0470093051053 485.28449426822505 616.3315035733303 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 A{M(Oxidation (M))|F}EQ 2.0147 - 117 + 1 1.648 132784.5 1.0 2669 5157 7822 HBL1_DMSO_200M_050219_1,7828 HBL1_DMSO_200M_050219_1,7828,CVFRSTVQR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7829 41.334 800.0 220350.0 25 0 17203.0 + 31602 RQVETTETL 9 206 538.7834143807993 1075.5522758283985 2 538.7827636599541 MULTI CID FTMS 0 0 0 7822 173537.484375 1.0 0 0.0 7 Unmodified _RQVETTETL_ ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295 49.55428908609986 0.0413471690215031 3 {[QN]|[E{I|L}]|[KN]}[RN]TTET{I|L} 9 3 + 72.132 0.0 0.0 6.7065 6.7065 83.529 0.0 0.0 0.0 3.266062568876705 16.478174818886373 3.266062568876705 3.266062568876705 0 0.9247425010840048 1.6989700043360187 1.4802046884880935 0.0 {[QN]|[E{I|L}]|[KN]}[RN]TTET{I|L};[DP]T[KA]TTET{I|L};{[QN]|[E{I|L}]|[KN]}T[RN]TET{I|L};[{I|L}T]E[RN]TET{I|L};[AG]RVETTET{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}VETTET{I|L};{[QN]|[E{I|L}]|[KN]}[RN]TTTE{I|L};[{I|L}T][PG][SG]TTET{I|L};[DP]T[KA]TTTE{I|L};{[QN]|[E{I|L}]|[KN]}T[RN]TTE{I|L} 6.7065;6.4028;6.359;6.2968;5.9824;5.8668;5.7293;5.4312;5.4256;5.3818 -;-;-;-;-;+;-;-;-;- + 1940 1 1.648 137585.5 0.9300000071525574 2670 5157 7822 HBL1_DMSO_200M_050219_1,7829 HBL1_DMSO_200M_050219_1,7829,RQVETTETL True True RQVETTETL 41.333978 538.782763659954 1721128.0 7822.0 nc|ENSG00000166004|Q9C0D2-3|CEP295;;ENSG00000166004|ENST00000325212|CEP295 5.85319455464681 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7830 41.348 800.0 239810.0 25 0 28269.0 + 18465 KYIGYARQY 9 142 581.3060918490735 1160.5976307649469 2 581.3066284060478 MULTI CID FTMS 0 0 0 7822 170000.40625 0.4162252954809977 -2 0.1492462158203125 8 Unmodified _KYIGYARQY_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 68.08070601005525 0.0218408846571049 3 KY{I|L}GYC(Carbamidomethyl (C))K{I|L} 8 4 74.066 0.0 0.0 6.3817 0.0 0.0 0.0 132.0457705133422 132.0457705133422 59.46185673204745 0.0 0.0 0.0 0 1.6989700043360187 1.2218487496163564 0.0 0.4247425010840047 KY{I|L}GYC(Carbamidomethyl (C))K{I|L} 6.3817 - 789 + 1 1.648 142607.9 0.9200000166893004 2671 5157 7822 HBL1_DMSO_200M_050219_1,7830 HBL1_DMSO_200M_050219_1,7830,KYIGYARQY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7831 41.362 800.0 88846.0 25 0 7203.4 + 15616 IQDLTERRFDD 11 103 704.3455347912585 0 704.3450195193291 PEAK CID FTMS 0 0 0 7822 147028.34375 0.9880793898105896 4 -0.1620864868164062 9 Unmodified _IQDLTERRFDD_ REV__ENSG00000173821|ENST00000582970|RNF213;REV__ENST00000559070.5_1_17:78261823-78310301:+|nuORF;REV__nc|ENSG00000173821|Q63HN8-4|RNF213;REV__nc|ENSG00000173821|Q63HN8|RNF213 14.40537977576856 0.4095794898365014 3 DT{I|L}DG 5 -1 22.401 0.0 0.0 1.5924 0.0 0.0 721.3488771671582 181.09856592349848 902.4474430906566 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0629529932484498 0.0 DT{I|L}DG 1.5924 - 326 + 1 1.648 56996.4 0.7900000214576721 2672 5157 7822 HBL1_DMSO_200M_050219_1,7831 HBL1_DMSO_200M_050219_1,7831,IQDLTERRFDD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7833 41.366 7.6 7641300.0 25 0 955250.0 + 3257 AYGPPTRAV 9 47 466.2532950808652 930.4920372285304 2 466.2534973025322 MULTI CID FTMS 0 0 0 7832 9166115.0 0.9009323048195342 -1 0.06732177734375 1 Unmodified _AYGPPTRAV_ ENSG00000084463|ENST00000261167|WBP11 17.11289562659939 0.3734572693229295 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5 4 51.466 0.0 0.0 5.531 0.0 0.0 0.0 442.2418306940063 442.2418306940063 44.47621246364342 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5.531 + + 28 + 1 1.648 53053.0 1.0 2673 5158 7832 HBL1_DMSO_200M_050219_1,7833 HBL1_DMSO_200M_050219_1,7833,AYGPPTRAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7834 41.379 751.0 207350.0 25 0 9092.4 + + 10660 MPPAPPPPPPQN 12 138 620.3132969374445 1238.612040941689 2 620.3132812380791 MULTI CID FTMS 0 0 0 7832 242233.671875 0.2633467217068518 25 -1.6844520568847656 2 Unmodified _FVQLCPYKGQG_ ENST00000413725.5_1_11:64533292-64535069:-|nuORF;ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-7|SF1 21.53697664764585 0.586507868110548 3 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 78.38 15.706 3.9643 6.328 6.328 60.113 0.0 0.0 0.0 0.0 53.06454256956869 0.0 0.0 0 2.774227503252014 0.0 0.0 2.0105742396127924 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 6.328 - 3034 + 1 1.648 116983.5 1.0 2674 5158 7832 HBL1_DMSO_200M_050219_1,7834 HBL1_DMSO_200M_050219_1,7834,FVQLCPYKGQG False False MPPAPPPPPPQN 41.378931 620.313281238079 490991600.0 7832.0 ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;ENSG00000168066|ENST00000377390|SF1;;nc|ENSG00000168066|Q15637-7|SF1 6.336390177408855 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7835 41.381 69.0 917170.0 25 0 90273.0 + 39915 VFQKPSGVSA 10 87 510.2794559793774 1018.5443590255549 2 510.2797119021416 MULTI CID FTMS 0 0 0 7832 975246.875 0.3336251244042557 -9 0.5510482788085938 3 Unmodified _VFQKPSGVSA_ ENSG00000189306|ENST00000323013|RRP7A;ENST00000357802.6_1_22:42970741-42976277:-|nuORF 59.36838082759317 0.0382430275470746 3 V{M(Oxidation (M))|F}QK 4 6 42.964 0.0 0.0 4.2182 0.0 0.0 0.0 513.2312137848309 513.2312137848309 19.812900554180924 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.4247425010840047 + V{M(Oxidation (M))|F}QK 4.2182 + + 322 + 1 1.648 55984.4 1.0 2675 5158 7832 HBL1_DMSO_200M_050219_1,7835 HBL1_DMSO_200M_050219_1,7835,VFQKPSGVSA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7836 41.384 156.0 287490.0 25 0 18619.0 + -1 GSPAAPCLCE 10 86 495.2076237831331 988.4006946330662 2 495.2099182009697 MULTI CID FTMS 0 0 0 7832 387976.9375 0.590622173909941 -10 0.5712699890136719 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))GSPAAPCLCE_ REV__SVA_D_dup1331|chr19:38854971-38856692:-|1.2988722813039473|0.199855440521665|2.7|47.0|28|3|sense 9.38312468134398 0.6832340498775793 3 {[DA]|[EG]}W 3 -1 30.7 0.0 0.0 3.106 0.0 0.0 0.0 613.2119234674436 613.2119234674436 10.3330122870355 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {[DA]|[EG]}W 3.106 - 77 + 1 1.648 41443.0 1.0 2676 5158 7832 HBL1_DMSO_200M_050219_1,7836 HBL1_DMSO_200M_050219_1,7836,GSPAAPCLCE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7837 41.388 234.0 584840.0 25 0 51361.0 -1 PEPCPCPSL 9 161 352.82158325248207 1055.4429203576462 3 352.8211852908134 MULTI CID FTMS 0 0 0 7832 332191.65625 0.8017555587249938 -3 0.2165679931640625 5 2 Carbamidomethyl (C) _PEPC(Carbamidomethyl (C))PC(Carbamidomethyl (C))PSL_ ENST00000481739.1_1_9:137328505-137328601:+|nuORF 4.5288652416199255 0.7565837746943351 3 NPK{I|L} 4 -1 16.285 0.0 0.0 1.543 0.0 0.0 585.1573196269807 0.0 585.1573196269807 0.0 5.316080989228887 0.0 0.0 0 0.0 0.0 0.0 0.1643943297944484 NPK{I|L} 1.543 - 248 + 1 1.648 116034.1 1.0 2677 5158 7832 HBL1_DMSO_200M_050219_1,7837 HBL1_DMSO_200M_050219_1,7837,PEPCPCPSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7838 41.393 291.0 344100.0 25 0 41363.0 + 15351 IPMEDRHNI 9 123 562.7796283729099 1123.5447038126197 2 562.7809936404228 MULTI CID FTMS 0 0 0 7832 217470.875 0.4871389640092594 -2 0.101409912109375 6 Unmodified _IPMEDRHNI_ ENSG00000175305|ENST00000308108|CCNE2;nc|ENSG00000175305|O96020-2|CCNE2 45.69961567697781 0.0497987121815769 3 {I|L}PMEDRHN{I|L} 9 0 + 77.635 0.0 0.0 6.9098 6.9098 91.988 0.0 0.0 0.0 64.44714388449668 10.418789730154003 10.418789730154003 11.510234424404686 0 0.3807196863200844 2.0 0.0 1.079689690656103 + + {I|L}PMEDRHN{I|L};{I|L}PMEDRHGG{I|L};{I|L}PMEDR{[QV]|[N{I|L}]|[RA]|[KV]}H;{I|L}PMED[VG]{[QV]|[N{I|L}]|[RA]|[KV]}H;{I|L}PM{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YN]N{I|L};{I|L}P{[RE]|[WV]}[MD]HN{I|L};{I|L}{I|L}DED[VG]HN{I|L};{I|L}{I|L}DED[VG]{[QV]|[N{I|L}]|[RA]|[KV]}H;{I|L}{I|L}DED[VG]HGG{I|L} 6.9098;5.8853;5.5719;4.7523;4.2646;4.1545;4.0422;2.7043;1.9267 +;-;-;-;-;-;-;-;- + 230 + 1 1.648 82298.1 1.0 2678 5158 7832 HBL1_DMSO_200M_050219_1,7838 HBL1_DMSO_200M_050219_1,7838,IPMEDRHNI True True IPMEDRHNI 41.393367 562.780993640423 2717673.25 7832.0 nc|ENSG00000175305|O96020-2|CCNE2;;ENSG00000175305|ENST00000308108|CCNE2 7.423761367797852 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7839 41.407 800.0 67131.0 25 0 12954.0 -1 0 48 1095.776085837209 3284.306428111827 3 1096.448413074017 MULTI CID FTMS 0 0 0 7832 99428.2265625 0.0467373967950256 8 -0.2050819396972656 7 3 E 1 -1 6.9897 0.0 0.0 0.21282 0.0 0.0 2628.079111648964 524.1623018854124 3152.241413534376 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21282 - 28 + 1 1.648 51494.2 0.5199999809265137 2679 5158 7832 HBL1_DMSO_200M_050219_1,7839 HBL1_DMSO_200M_050219_1,7839, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7841 41.423 800.0 65160.0 25 0 11999.0 -1 0 38 1076.0937675196983 3225.259473159296 3 1076.430346667767 MULTI CID FTMS 0 0 0 7840 55815.04296875 0.6058123366399366 1 -0.0245475769042968 1 3 E 1 -1 5.4846 0.0 0.0 0.17005 0.0 0.0 2569.0339615399585 524.1623018854124 3093.196263425371 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.17005 - 5 + 1 1.648 50264.9 0.5 2680 5159 7840 HBL1_DMSO_200M_050219_1,7841 HBL1_DMSO_200M_050219_1,7841, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7842 41.424 17.0 3433900.0 25 0 423940.0 + 5777 DPPPGSHVI 9 92 459.7369120917008 917.4592712502016 2 459.7386962771416 MULTI CID FTMS 0 0 0 7840 2707356.0 0.1079182872211733 -11 0.6168746948242188 2 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 34.10243960390752 0.1078313939113124 3 [DP]PAPP 6 6 45.891 0.0 0.0 5.0019 0.0 0.0 0.0 340.1501031195955 340.1501031195955 31.91122510072759 0.0 0.0 0.0 0 1.0 2.0 0.5 0.0 [DP]PAPP 5.0019 - 219 1 1.648 50207.8 1.0 2681 5159 7840 HBL1_DMSO_200M_050219_1,7842 HBL1_DMSO_200M_050219_1,7842,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7843 41.427 143.0 612960.0 25 0 65434.0 + 4549 DAYQTREI 8 105 498.2435566804139 994.472560427628 2 498.2432128787041 MULTI CID FTMS 0 0 0 7840 338379.15625 0.6987208557999314 -7 0.3725776672363281 3 Unmodified _DAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 29.081581746732265 0.4323690340403521 3 {[DA]|[EG]}YQ{I|L}{I|L}C(Carbamidomethyl (C)){I|L} 8 3 + 61.464 0.0 0.0 6.1805 6.1805 88.793 0.0 0.0 0.0 48.022919384477376 10.529324278304912 10.529324278304912 9.235162698957282 0 0.7302046884880937 1.6989700043360187 0.0 0.3807196863200844 {[DA]|[EG]}YQ{I|L}{I|L}C(Carbamidomethyl (C)){I|L};{[DA]|[EG]}YQT{[RE]|[WV]}{I|L};{[DA]|[EG]}YQ{I|L}{I|L}[CG]{I|L};{[DA]|[EG]}YQT[W{I|L}]V;{[DA]|[EG]}Y[AG]{I|L}{I|L}C(Carbamidomethyl (C)){I|L};{[DA]|[EG]}Y[AG]T{[RE]|[WV]}{I|L};{[DA]|[EG]}Y[AG]{I|L}{I|L}[CG]{I|L};{[DA]|[EG]}Y[AG]T[W{I|L}]V;WY[NP][R{M(Oxidation (M))|F}]{I|L};W[TP]{I|L}MH[NP] 6.1805;5.2519;5.2492;5.0466;4.8663;4.3205;3.9404;3.7324;1.8447;0.6198 -;+;-;-;-;-;-;-;-;- + 231 + 1 1.648 70802.7 1.0 2682 5159 7840 HBL1_DMSO_200M_050219_1,7843 HBL1_DMSO_200M_050219_1,7843,DAYQTREI False True DAYQTREI 41.427181 498.243212878704 3297234.0 7840.0 ENSG00000127914|ENST00000356239|AKAP9;;nc|ENSG00000127914|Q99996-3|AKAP9;;nc|ENSG00000127914|Q99996-6|AKAP9 4.357428550720215 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7844 41.432 245.0 449210.0 25 0 32271.0 28266 PRGGAFGA 8 164 366.6928590994936 731.3711652657872 2 367.1960327029228 MULTI CID FTMS 0 0 0 7840 192833.765625 0.4099489075302432 -8 0.4760093688964844 4 Unmodified _PRGGAFGA_ ENST00000417584.6_1_1:182357843-182360450:-|nuORF 2.577480529830294 0.808687252328423 3 {[TV]|[{I|L}S]}G 3 7 33.952 0.0 0.0 4.6423 0.0 0.0 0.0 471.21238123111567 471.21238123111567 17.957574905606748 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[TV]|[{I|L}S]}G 4.6423 - 93 + 1 1.648 89030.8 1.0 2683 5159 7840 HBL1_DMSO_200M_050219_1,7844 HBL1_DMSO_200M_050219_1,7844,PRGGAFGA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7846 41.437 87.0 642320.0 25 0 34695.0 + 31893 RTNSTFNQV 9 106 533.7673788724646 1065.5202048117292 2 533.7667114138603 MULTI CID FTMS 0 0 0 7845 415859.90625 0.3022711637017214 3 -0.08843994140625 1 Unmodified _RTNSTFNQV_ ENSG00000063177|ENST00000549920|RPL18;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18 22.65808497894818 0.2428932432760099 3 ST{M(Oxidation (M))|F}NQV 6 3 46.151 0.0 0.0 4.3314 0.0 0.0 371.1913319318375 0.0 371.1913319318375 0.0 39.161772202409466 0.0 0.0 0 0.3979400086720376 0.0 0.7302046884880937 0.0 + ST{M(Oxidation (M))|F}NQV 4.3314 + + 577 1 1.649 51013.7 1.0 2684 5160 7845 HBL1_DMSO_200M_050219_1,7846 HBL1_DMSO_200M_050219_1,7846,RTNSTFNQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7847 41.441 243.0 419830.0 25 0 28477.0 + 5083 DGYKVNSHI 9 137 344.8412862142825 0 344.8407470583916 PEAK CID FTMS 0 0 0 7845 172409.515625 0.9160910833331536 1 -0.0246124267578125 2 Unmodified _DGYKVNSHI_ ENSG00000204856|ENST00000377673|FAM216A;ENST00000538285.6_1_12:110906680-110924532:+|nuORF;ENST00000548869.1_1_12:110906313-110924532:+|nuORF 13.042465956692816 0.2773713495150148 3 VNS 3 6 8.2315 0.0 0.0 1.197 0.0 0.0 119.3703210480091 265.13034998111567 384.5006710291248 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + VNS 1.197 + + 31 + 1 1.649 88172.0 1.0 2685 5160 7845 HBL1_DMSO_200M_050219_1,7847 HBL1_DMSO_200M_050219_1,7847,DGYKVNSHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7848 41.443 52.0 1312800.0 25 0 136210.0 13947 HYLVKVIAE 9 86 357.8765516622885 1070.6078255870657 3 357.8766052126884 MULTI CID FTMS 0 0 0 7845 944426.9375 1.0 0 0.0 3 Unmodified _HYLVKVIAE_ ENSG00000184922|ENST00000331495|FMNL1;nc|ENSG00000184922|O95466-2|FMNL1;nc|ENSG00000184922|O95466-3|FMNL1 11.494710602746466 0.5255349189887087 3 K{I|L}EA 4 7 19.865 0.0 0.0 1.8555 0.0 0.0 611.3385487287125 0.0 611.3385487287125 0.0 4.38039076304328 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.3494850021680094 K{I|L}EA 1.8555 - 47 1 1.649 61717.2 1.0 2686 5160 7845 HBL1_DMSO_200M_050219_1,7848 HBL1_DMSO_200M_050219_1,7848,HYLVKVIAE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7849 41.456 800.0 212450.0 25 0 15809.0 + 7697 EKTLTLAQIE 10 158 573.325583597526 0 573.3251220583916 PEAK CID FTMS 0 0 0 7845 161714.1875 1.0 0 0.0 4 Unmodified _EKTLTLAQIE_ REV__ENSG00000003509|ENST00000002125|NDUFAF7;REV__ENST00000474154.5_1_2:37458848-37468954:+|nuORF 38.17557092003332 0.1299896074792053 3 {I|L}AQE 4 -1 31.221 0.0 0.0 2.7276 0.0 0.0 572.313324322202 128.07196985416252 700.3852941763645 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7134679910804405 0.9049471895720984 {I|L}AQE 2.7276 - 362 + 1 1.649 128506.6 0.8799999952316284 2687 5160 7845 HBL1_DMSO_200M_050219_1,7849 HBL1_DMSO_200M_050219_1,7849,EKTLTLAQIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7851 41.464 323.0 358400.0 25 0 62904.0 + 36363 SYPTKQAAL 9 107 489.7658283264055 0 489.7657653689384 PEAK CID FTMS 0 0 0 7850 187372.640625 0.4674373477164899 5 -0.1103172302246093 1 Unmodified _SYPTKQAAL_ ENSG00000134294|ENST00000256689|SLC38A2;ENST00000553252.1_1_12:46764947-46766316:-|nuORF 25.399314129420983 0.152124705672316 3 AARQT 5 8 12.044 0.0 0.0 1.2321 0.0 0.0 381.18861832090687 66.03567682437733 447.2242951452842 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.3494850021680094 AARQT 1.2321 - 204 + 1 1.649 91351.2 1.0 2688 5161 7850 HBL1_DMSO_200M_050219_1,7851 HBL1_DMSO_200M_050219_1,7851,SYPTKQAAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7852 41.473 466.0 257450.0 25 0 15226.0 + 38278 TQADWQHRV 9 160 380.8558528880142 1139.5457292642427 3 380.8557617068291 MULTI CID FTMS 0 0 0 7850 180098.734375 0.8092114015755948 -6 0.3113327026367187 2 Unmodified _TQADWQHRV_ ENSG00000166199|ENST00000302708|ALKBH3;ENST00000532962.5_1_11:43918877-43941557:+|nuORF 24.881564428377168 0.2146028316269493 3 [QT]ADWQH[RV] 9 0 + 54.057 0.0 0.0 4.7438 4.7438 80.107 0.0 0.0 0.0 11.349806749024404 6.020599913279625 6.020599913279625 6.020599913279625 0 0.4247425010840047 0.4202164033831898 0.0 0.8494850021680094 + + [QT]ADWQH[RV];[QT]ADWQV[RH];[QT]ADWVQ[RH];[QT]ADW[AG]H[RV];[QT]ADW[AG]V[RH];[QT]W{[DA]|[EG]}QH[RV];[QT]ADWV[AG][RH];{[DA]|[EG]}[RP]VWWNP;[QT]W{[DA]|[EG]}QV[RH];[QT]W{[DA]|[EG]}VQ[RH] 4.7438;4.2154;4.1058;3.9357;3.4074;3.3625;3.2977;3.1951;2.8342;2.7245 +;-;-;-;-;-;-;-;-;- + 262 + 1 1.649 99021.6 1.0 2689 5161 7850 HBL1_DMSO_200M_050219_1,7852 HBL1_DMSO_200M_050219_1,7852,TQADWQHRV False True TQADWQHRV 41.472546 380.855761706829 1721731.125 7850.0 ENST00000532962.5_1_11:43918877-43941557:+|nuORF;;ENSG00000166199|ENST00000302708|ALKBH3 9.462238629659018 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7853 41.486 800.0 261930.0 25 0 63531.0 + 16115 ITSSAVTTALK 11 192 546.3184023876743 1090.6222518421484 2 546.3191406130791 MULTI CID FTMS 0 0 0 7850 180390.296875 1.0 0 0.0 3 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 59.05245873256422 0.0729907235015292 3 [{I|L}T][KA]TVASST{I|L} 11 8 + 67.45 0.0 0.0 6.1845 6.1845 82.435 0.0 0.0 0.0 6.232183814129321 29.371093951438013 6.232183814129321 3.692449949529461 0 0.6549471895720985 2.0 3.166386562212267 0.0 [{I|L}T][KA]TVASST{I|L};[{I|L}T][KA]TVNMT{I|L};[{I|L}T][KA]TVA{M(Oxidation (M))|F}K{I|L};{I|L}TS[YR]G[PG]K{I|L};[{I|L}T][KA]TVCDK{I|L};[{I|L}T][KA]G[{I|L}T]SST{I|L};{I|L}TS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T[PG]K{I|L};{I|L}TS[YR]G[PG]{I|L}K;[{I|L}T][KA]TVGGMT{I|L};[{I|L}T][KA]G{[VA]|[{I|L}G]}MST{I|L} 6.1845;5.846;5.5372;5.4388;5.2817;5.2215;5.2011;5.0684;5.0057;4.8934 -;-;-;-;-;-;-;-;-;- 2259 1 1.649 160034.2 0.8799999952316284 2690 5161 7850 HBL1_DMSO_200M_050219_1,7853 HBL1_DMSO_200M_050219_1,7853,ITSSAVTTALK True True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 7854 41.5 800.0 180560.0 25 0 10091.0 10883 GAFYLLGTGSM 11 169 558.7711756368537 1115.5277983405074 2 558.7718994021416 MULTI CID FTMS 0 0 0 7850 181728.8125 0.2859426478504696 -6 0.3113327026367187 4 Unmodified _GAFYLLGTGSM_ nc|ENSG00000211750|A0A075B6N3|TRBV24-1 30.63653989081413 0.3728473165938781 3 TY{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}KTSM 9 6 + 64.79 0.0 0.0 5.808 5.808 82.562 0.0 0.0 0.0 4.771212547196626 14.322581265925436 4.771212547196626 4.771212547196626 0 1.5924778212679485 1.6989700043360187 0.555462187404089 0.0 TY{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}KTSM;YT{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}KTSM;[YT]{I|L}R{[MG]|[TS]}GTSM;[DV]NK[HK]GGMM;[YT]{I|L}R{[MG]|[TS]}GTA{M(Oxidation (M))|F};{[NV]|[RG]}{[QD]|[EN]|[WG]|[KD]|[RS]}[HK]GTSM;[DV]NK[HK]NMM;TY{I|L}{[YD]|[{M(Oxidation (M))|F}M]}HHAP;{[CP]|[EA]}QK[HK]GTSM;TY{I|L}VV[DP]Y{M(Oxidation (M))|F} 5.808;5.3803;4.5241;3.1159;3.108;2.8942;2.8002;2.7037;2.6711;2.4132 -;-;-;-;-;-;-;-;-;- 1800 + 1 1.649 115009.6 0.8799999952316284 2691 5161 7850 HBL1_DMSO_200M_050219_1,7854 HBL1_DMSO_200M_050219_1,7854,GAFYLLGTGSM False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 7856 41.516 800.0 165240.0 25 0 16941.0 + 5864 DPYASGKI 8 161 425.7188144214388 0 425.7188293337822 PEAK CID FTMS 0 0 0 7855 51624.73046875 0.5472955524053136 4 -0.0663566589355468 1 Unmodified _DPYASGKI_ ENSG00000115364|ENST00000393909|MRPL19 32.78568957990786 0.2051770602087501 3 PYAS 4 4 16.692 0.0 0.0 1.9651 0.0 0.0 115.02900996670616 313.18769251041255 428.2167024771187 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.2302046884880938 0.0 + PYAS 1.9651 + + 50 + 1 1.649 105451.0 0.5400000214576721 2692 5162 7855 HBL1_DMSO_200M_050219_1,7856 HBL1_DMSO_200M_050219_1,7856,DPYASGKI False True DPYASGKI 41.516216 425.718829333782 1049093.75 7855.0 ENSG00000115364|ENST00000393909|MRPL19 6.224912007649739 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7857 41.52 205.0 346590.0 25 0 28734.0 + 37632 TLLNHNGD 8 96 442.2171223940662 882.4196918549325 2 442.2192565798759 MULTI CID FTMS 0 0 0 7855 143083.515625 0.0680032511413897 -7 0.3552932739257812 2 Unmodified _TLLNHNGD_ REV__ENSG00000122417|ENST00000460698|ODF2L;REV__nc|ENSG00000122417|Q9ULJ1-2|ODF2L;REV__nc|ENSG00000122417|Q9ULJ1-3|ODF2L;REV__nc|ENSG00000122417|Q9ULJ1-5|ODF2L;REV__nc|ENSG00000122417|Q9ULJ1-6|ODF2L;REV__nc|ENSG00000122417|Q9ULJ1|ODF2L 12.531546534597751 0.7257836412119636 3 Y{M(Oxidation (M))|F}{I|L} 3 -1 15.406 0.0 0.0 1.7459 0.0 0.0 441.2359001053263 0.0 441.2359001053263 0.0 2.641865279118784 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F}{I|L} 1.7459 - 67 + 1 1.649 61984.5 1.0 2693 5162 7855 HBL1_DMSO_200M_050219_1,7857 HBL1_DMSO_200M_050219_1,7857,TLLNHNGD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7859 41.525 11.0 5413900.0 25 0 1246700.0 + 5050 DGYEQAARV 9 81 504.7406236745259 1007.466694415852 2 504.7409850955009 MULTI CID FTMS 0 0 0 7858 5585681.0 0.8952758359570586 1 -0.0143966674804687 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 71.92227651296345 0.0203558744033348 3 [DG]YEQAA[RV] 9 0 + 71.947 0.0 0.0 7.1414 7.1414 91.122 0.0 0.0 0.0 54.95235939505172 8.384767769392738 8.384767769392738 9.208187539523747 0 0.7059771852360797 1.0969100130080565 0.4247425010840047 1.079689690656103 + + [DG]YEQAA[RV];[DG]YE[AG]AA[RV];[DG]YEV[NG][RV];[DG]YV[DN]A[RV];[DG]YVE[NG][RV];[KQ][RN]EC[KC];[DG][TP]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V] 7.1414;6.2274;5.2802;4.6149;4.3161;0.63012;0.057661 +;-;-;-;-;-;- + 145 + 1 1.649 50959.3 1.0 2694 5163 7858 HBL1_DMSO_200M_050219_1,7859 HBL1_DMSO_200M_050219_1,7859,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7860 41.526 39.0 1373000.0 25 0 262470.0 11548 GISAVSEFF 9 90 478.7377214385669 955.4608899439338 2 478.7378723025322 MULTI CID FTMS 0 0 0 7858 1051116.75 0.4667143319555467 4 -0.0735740661621093 2 Unmodified _GISAVSEFF_ ENSG00000244476|ENST00000472091|ERVFRD-1 18.13498045792455 0.3457906370836843 3 VTQVNKV 7 8 36.675 0.0 0.0 3.8384 0.0 0.0 169.00134503479904 0.0 169.00134503479904 0.0 29.68510744290249 0.0 0.0 0 0.0 0.0 0.0 0.0 VTQVNKV 3.8384 - 164 + 1 1.649 47184.5 1.0 2695 5163 7858 HBL1_DMSO_200M_050219_1,7860 HBL1_DMSO_200M_050219_1,7860,GISAVSEFF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7861 41.535 479.0 250600.0 25 0 18531.0 + 18421 KVVTSRPAAV 10 146 514.3161304761588 1026.6177080191176 2 514.3168823122978 MULTI CID FTMS 0 0 0 7858 136973.828125 0.9299474078332276 -2 0.0638275146484375 3 Unmodified _KVVTSRPAAV_ ENSG00000167207|ENST00000647318|NOD2;nc|ENSG00000167207|Q9HC29|NOD2 14.40537977576856 0.6058337302021266 3 KV{I|L}S 4 7 45.403 0.0 0.0 4.4226 0.0 0.0 0.0 596.3156832330686 596.3156832330686 33.620123889285566 0.0 0.0 0.0 0 0.7614393726401688 0.585026652029182 0.0 0.0 KV{I|L}S 4.4226 - 194 + 1 1.649 93478.3 1.0 2696 5163 7858 HBL1_DMSO_200M_050219_1,7861 HBL1_DMSO_200M_050219_1,7861,KVVTSRPAAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7863 41.539 28.0 2151900.0 25 0 285890.0 + 12900 GWGPPPSL 8 83 405.710745005675 809.40693707815 2 405.7107116580009 MULTI CID FTMS 0 0 0 7862 1938972.875 0.3904405122635073 5 -0.2283782958984375 1 Unmodified _GWGPPPSL_ REV__nc|ENSG00000180068|P47883|OR3A4P 14.581692164780916 0.6954967302934248 3 YHKYS{I|L} 6 -1 + 57.853 0.0 0.0 7.1476 7.1476 95.457 0.0 0.0 0.0 36.78334379460914 13.46787486224656 13.46787486224656 57.85335007137462 0 1.1989700043360187 1.5228787452803376 0.0 0.0 YHKYS{I|L} 7.1476 - 104 + 1 1.649 54226.7 1.0 2697 5164 7862 HBL1_DMSO_200M_050219_1,7863 HBL1_DMSO_200M_050219_1,7863,GWGPPPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7864 41.54 54.0 1401300.0 25 0 141810.0 + 4303 DARKPPVI 8 90 448.271664230836 894.528775528472 2 448.2717773318291 MULTI CID FTMS 0 0 0 7862 1106182.0 0.715721369769484 3 -0.0591773986816406 2 Unmodified _DARKPPVI_ ENSG00000142621|ENST00000688493|FHAD1;nc|ENSG00000142621|B1AJZ9-3|FHAD1;nc|ENSG00000142621|B1AJZ9-4|FHAD1;nc|ENSG00000142621|B1AJZ9|FHAD1 32.78568957990786 0.3549862272178655 3 {[DA]|[EG]}RKPPV{I|L} 8 0 + 44.326 0.0 0.0 4.9552 4.9552 79.004 0.0 0.0 0.0 12.819152948723094 34.57166240564792 12.819152948723094 4.304009240123889 0 0.555462187404089 1.3979400086720375 0.0 0.0 + + {[DA]|[EG]}RKPPV{I|L};{[DA]|[EG]}RKPVP{I|L};{[SA]|[TG]}RR[RH]{I|L} 4.9552;4.474;0.7518 +;-;- + 137 1 1.649 64440.5 1.0 2698 5164 7862 HBL1_DMSO_200M_050219_1,7864 HBL1_DMSO_200M_050219_1,7864,DARKPPVI False True DARKPPVI 41.540289 448.271777331829 26302388.0 7862.0 ENSG00000142621|ENST00000688493|FHAD1;;nc|ENSG00000142621|B1AJZ9-4|FHAD1;;nc|ENSG00000142621|B1AJZ9-3|FHAD1;;nc|ENSG00000142621|B1AJZ9|FHAD1 5.0056179364522295 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7865 41.542 72.0 804060.0 25 0 128680.0 + 31961 RVEEAIHPV 9 65 525.2904313879149 1048.5663098426296 2 525.2908203005791 MULTI CID FTMS 0 0 0 7862 631460.9375 0.1609295236083115 7 -0.4457283020019531 3 Unmodified _RVEEAIHPV_ ENST00000367590.8_1_1:180601192-180601402:+|nuORF 17.11289562659939 0.3734572693229295 3 [{I|L}T]H{I|L}A 5 7 28.328 0.0 0.0 2.7016 0.0 0.0 0.0 510.2291964166625 510.2291964166625 17.870156338638594 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 [{I|L}T]H{I|L}A 2.7016 - 49 + 1 1.649 51705.5 1.0 2699 5164 7862 HBL1_DMSO_200M_050219_1,7865 HBL1_DMSO_200M_050219_1,7865,RVEEAIHPV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7866 41.545 125.0 602230.0 25 0 78836.0 + 39841 FVDEGKATV 9 92 483.2505712403064 964.4865895474128 2 483.2508422732353 MULTI CID FTMS 0 0 0 7862 371114.59375 0.2973902795426812 -4 0.1028366088867187 4 Unmodified _VFDEVFPL_ nc|ENSG00000165501|Q96L50-2|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF;ENSG00000165501|ENST00000298288|LRR1 28.17323086031832 0.4514957916281387 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKATV[{M(Oxidation (M))|F}V] 9 7 + 41.014 0.0 0.0 4.2524 4.2524 84.618 0.0 0.0 0.0 9.806358358995272 21.58900166109908 9.806358358995272 17.95880017344075 0 0.0 0.0 1.0044321917401078 0.2887254899964357 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKATV[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}[DN]ATV[{M(Oxidation (M))|F}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KQ]TV[{M(Oxidation (M))|F}V] 4.2524;2.3904;1.5864 -;-;- 173 1 1.649 61584.4 1.0 2700 5164 7862 HBL1_DMSO_200M_050219_1,7866 HBL1_DMSO_200M_050219_1,7866,VFDEVFPL False False FVDEGKATV 41.544543 483.250842273235 6511196.0 7862.0 nc|ENSG00000165501|Q96L50-2|LRR1;;ENST00000540712.1_1_14:50068361-50081211:+|nuORF;;ENSG00000165501|ENST00000298288|LRR1 5.606541474660237 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7867 41.548 170.0 402030.0 25 0 71747.0 42217 VSHHLPCL 8 75 453.2361989939912 0 453.2351257205009 PEAK CID FTMS 0 0 0 7862 258759.734375 0.6218919434300902 5 -0.2283782958984375 5 Unmodified _VSHHLPCL_ ENST00000239223.3_1_5:172196038-172196098:-|nuORF 9.347437153973935 0.5488964601725408 3 V 1 7 6.9897 0.0 0.0 0.77281 0.0 0.0 232.0765717166948 570.2891329400999 802.3657046567946 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.77281 + + 30 + 1 1.649 57207.0 1.0 2701 5164 7862 HBL1_DMSO_200M_050219_1,7867 HBL1_DMSO_200M_050219_1,7867,VSHHLPCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7868 41.551 172.0 307620.0 25 0 16687.0 -1 0 97 568.433315920545 3404.55623672367 6 568.7691528201103 MULTI CID FTMS 0 0 0 7862 216074.09375 0.9796290870471478 -2 0.0342636108398437 6 3 MSTNG{I|L}PR 8 -1 46.588 0.0 0.0 1.3684 0.0 0.0 2530.128108306905 0.0 2530.128108306905 0.0 33.44898345650605 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3054621874040891 MSTNG{I|L}PR 1.3684 - 281 + 1 1.649 45800.4 1.0 2702 5164 7862 HBL1_DMSO_200M_050219_1,7868 HBL1_DMSO_200M_050219_1,7868, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7869 41.557 331.0 420910.0 25 0 29342.0 + 17478 KPFCTLSGV 9 162 476.2515189082321 0 476.2559997439384 PEAK CID FTMS 0 0 0 7862 149158.640625 0.2662521964199053 -7 0.2403106689453125 7 Unmodified _KPFCTLSGV_ REV__ENSG00000075568|ENST00000186436|TMEM131 7.289230182591677 0.3433663536648894 3 PPD 3 -1 12.307 0.0 0.0 1.2948 0.0 0.0 202.06628873039875 436.2548006647094 638.3210893951082 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPD 1.2948 - 127 + 1 1.649 108864.3 1.0 2703 5164 7862 HBL1_DMSO_200M_050219_1,7869 HBL1_DMSO_200M_050219_1,7869,KPFCTLSGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7871 41.562 61.0 902890.0 25 0 67810.0 + 3294 AYIENAKQV 9 94 518.2767821575711 1034.539011381942 2 518.2759887576103 MULTI CID FTMS 0 0 0 7870 625244.5 0.0226450826435984 13 -1.0743751525878906 1 Unmodified _AYIENAKQV_ ENSG00000121022|ENST00000357849|COPS5;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 43.85829265575387 0.0542763391141878 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAKQV 9 0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} + + 25.973 23.724 10.134 2.5106 2.5106 49.385 0.0 0.0 0.0 0.0 5.003926414542306 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.5649093276264391 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAKQV 2.5106 + + 269 + 1 1.649 47527.6 1.0 2704 5165 7870 HBL1_DMSO_200M_050219_1,7871 HBL1_DMSO_200M_050219_1,7871,AYIENAKQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7872 41.567 271.0 406520.0 25 0 23325.0 + 16504 KALRAAELEA 10 129 536.3112919710273 1070.6080310088546 2 536.3110839724541 MULTI CID FTMS 0 0 0 7870 301451.15625 0.3403924335947242 6 -0.4230461120605469 2 Unmodified _KALRAAELEA_ REV__ENSG00000105821|ENST00000379263|DNAJC2;REV__ENST00000475065.5_1_7:102953018-102963086:-|nuORF;REV__nc|ENSG00000105821|Q99543-2|DNAJC2 35.995811192298525 0.199850397622382 3 {I|L}EA 3 -1 32.624 0.0 0.0 3.0473 0.0 0.0 739.4339667281517 0.0 739.4339667281517 0.0 2.658467447160988 0.0 0.0 0 0.9436726795685342 0.0 0.0 0.0 {I|L}EA 3.0473 + + 201 1 1.649 87014.1 1.0 2705 5165 7870 HBL1_DMSO_200M_050219_1,7872 HBL1_DMSO_200M_050219_1,7872,KALRAAELEA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7874 41.571 85.0 739510.0 25 0 42584.0 + -1 SGSLITGVHS 10 110 500.2607878718704 998.5070228105408 2 500.2606384158134 MULTI CID FTMS 0 0 0 7873 503336.375 0.9069162683353824 -2 0.0320930480957031 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SGSLITGVHS_ REV__ENST00000552000.2_1_17:46681925-46682093:-|nuORF 29.081581746732265 0.3152867722954398 3 {[DA]|[EG]}S{I|L}QP[RN]V 9 -1 + 45.881 0.0 0.0 4.5949 4.5949 77.212 0.0 0.0 0.0 4.770760251333073 4.770760251333073 4.770760251333073 3.767507096020992 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}S{I|L}QP[RN]V;{[DA]|[EG]}S{I|L}Q[NG][VP]V;{[DA]|[EG]}S{I|L}G[YK]{M(Oxidation (M))|F}V;{[DA]|[EG]}KEAP[RN]V;{[DA]|[EG]}S{I|L}[AG]P[RN]V;{[DA]|[EG]}K[Q{I|L}]YYV;{[DA]|[EG]}S{I|L}{I|L}[HK]{[ES]|[DT]|[{I|L}C]};{NN|[MP]|[D{I|L}]|[EV]}[RP][PS]SEV;{[DA]|[EG]}K[Q{I|L}]N[DP]V;{NN|[MP]|[D{I|L}]|[EV]}YYVVEV 4.5949;4.2176;4.1171;3.6745;3.6727;3.1196;2.9861;2.9644;2.8639;2.6171 -;-;-;-;-;-;-;-;-;- 636 + 1 1.649 52144.0 1.0 2706 5166 7873 HBL1_DMSO_200M_050219_1,7874 HBL1_DMSO_200M_050219_1,7874,SGSLITGVHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7875 41.575 192.0 353280.0 25 0 16836.0 + 39103 TWPSPRTTPH 10 110 393.868493460061 1178.583650980383 3 394.2037231326103 MULTI CID FTMS 0 0 0 7873 75432.46875 0.1921369207758041 -5 0.1103172302246093 2 Unmodified _TWPSPRTTPH_ ENST00000294189.10_2_3:52028123-52029875:-|nuORF 16.149105407346934 0.5765757077271437 3 {[WT]|[RM]}PS 4 6 20.445 0.0 0.0 1.7347 0.0 0.0 0.0 704.348172351096 704.348172351096 8.226825097560422 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {[WT]|[RM]}PS 1.7347 + + 54 + 1 1.649 61692.9 1.0 2707 5166 7873 HBL1_DMSO_200M_050219_1,7875 HBL1_DMSO_200M_050219_1,7875,TWPSPRTTPH False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7876 41.576 26.0 2851500.0 25 0 366300.0 + 24186 LYYRDARSY 9 77 402.868233109826 1205.582869929678 3 402.8681213259697 MULTI CID FTMS 0 0 0 7873 1935135.375 0.9412474669264036 -1 0.0094108581542968 3 Unmodified _LYYRDARSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 23.80106514851385 0.2283505500606397 3 {I|L}YYRDY[WK] 8 4 + 73.621 0.0 0.0 6.1066 6.1066 75.97 0.0 0.0 0.0 36.40978057358332 0.0096284014659886 0.0096284014659886 0.0096284014659886 0 0.0 2.0 0.0 0.8494850021680094 {I|L}YYRDY[WK];{I|L}YYRDYS{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}YYRD{[QV]|[N{I|L}]|[RA]|[KV]}SY;{I|L}YYRD[WK]Y;{I|L}YY[VG]DY[WK];{I|L}YY[VG]D[WK]Y;{I|L}YYR[PG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y;{I|L}YY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YN]{[QV]|[N{I|L}]|[RA]|[KV]} 6.1066;6.1058;5.9985;5.8569;5.3384;5.0887;4.5089;3.4909 -;-;+;-;-;-;-;- + 129 + 1 1.649 61218.2 1.0 2708 5166 7873 HBL1_DMSO_200M_050219_1,7876 HBL1_DMSO_200M_050219_1,7876,LYYRDARSY False True LYYRDARSY 41.575868 402.86812132597 12242387.0 7873.0 ENSG00000159377|ENST00000290541|PSMB4;;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 6.453543504079183 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7877 41.58 225.0 600650.0 25 0 48925.0 + 28209 PQKLLRIK 8 165 332.5621792412723 994.6647083240168 3 332.5620605349541 MULTI CID FTMS 0 0 0 7873 237269.3125 0.8204146019751668 -1 0.0094108581542968 4 Unmodified _PQKLLRIK_ REV__ENST00000538711.5_1_3:49507862-49514334:+|nuORF 13.042465956692816 0.7182358012947757 3 PQK{I|L}KR{I|L}{I|L} 8 -1 + 43.167 0.0 0.0 4.3398 4.3398 75.187 0.0 0.0 0.0 31.57287904179043 7.821298672622504 7.821298672622504 3.0102999566398125 0 0.3434149081562394 0.0 0.0 0.8494850021680094 PQK{I|L}KR{I|L}{I|L};PQ{I|L}KKR{I|L}{I|L};P[AG]K{I|L}KR{I|L}{I|L};P[AG]{I|L}KKR{I|L}{I|L};{I|L}[QP]KKR{I|L}{I|L} 4.3398;4.0372;3.4086;3.106;2.2635 -;-;-;-;- 75 + 1 1.649 113447.4 1.0 2709 5166 7873 HBL1_DMSO_200M_050219_1,7877 HBL1_DMSO_200M_050219_1,7877,PQKLLRIK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7878 41.586 300.0 597910.0 25 0 56727.0 + + 20506 IPEKTVRVV 9 178 347.55352877603474 1039.6387569283042 3 347.5532104372978 MULTI CID FTMS 0 0 0 7873 191032.84375 0.5219119662325007 -2 0.0320930480957031 5 Unmodified _LLLLGLAGRD_ nc|ENSG00000082438|Q53SF7-3|COBLL1;nc|ENSG00000082438|Q53SF7-2|COBLL1;ENSG00000082438|ENST00000652658|COBLL1 8.745405648335112 0.6861838735306406 3 {I|L}PEKT 5 -1 37.761 0.0 0.0 3.6322 0.0 0.0 0.0 468.29502283267817 468.29502283267817 26.79223286773052 0.0 0.0 0.0 0 0.0 0.431798275933005 0.0 0.0 {I|L}PEKT 3.6322 - 84 + 1 1.649 150592.4 1.0 2710 5166 7873 HBL1_DMSO_200M_050219_1,7878 HBL1_DMSO_200M_050219_1,7878,LLLLGLAGRD False False IPEKTVRVV 41.58557 347.553210437298 7765112.0 7873.0 nc|ENSG00000082438|Q53SF7-3|COBLL1;;nc|ENSG00000082438|Q53SF7-2|COBLL1;;ENSG00000082438|ENST00000652658|COBLL1 5.2902805010477705 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7879 41.594 459.0 194800.0 25 0 12889.0 + 11121 GEGRIKDV 8 137 437.2422799199398 872.4700069066796 2 437.2430297732353 MULTI CID FTMS 0 0 0 7873 100387.4609375 0.9497113821138212 1 -0.0270843505859375 6 Unmodified _GEGRIKDV_ REV__ENSG00000090402|ENST00000264382|SI 12.531546534597751 0.7257836412119636 3 {[DA]|[EG]}G 3 -1 32.447 0.0 0.0 3.719 0.0 0.0 0.0 626.3620106510733 626.3620106510733 20.457574905606748 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[DA]|[EG]}G 3.719 + + 105 1 1.649 73659.4 1.0 2711 5166 7873 HBL1_DMSO_200M_050219_1,7879 HBL1_DMSO_200M_050219_1,7879,GEGRIKDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7881 41.61 800.0 136150.0 25 0 13020.0 + 18466 KYIGYARQY 9 139 581.3060918490735 1160.5976307649469 2 581.3066894412041 MULTI CID FTMS 0 0 0 7880 106805.1171875 0.2614993248597003 8 -0.7410354614257812 1 Unmodified _KYIGYARQY_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 24.020572477871973 0.2255576514309169 3 KY{I|L}GY 5 4 45.701 0.0 0.0 3.9377 0.0 0.0 0.0 533.2464083307249 533.2464083307249 23.76287494579977 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 + KY{I|L}GY 3.9377 + + 232 + 1 1.649 83221.9 0.7599999904632568 2712 5167 7880 HBL1_DMSO_200M_050219_1,7881 HBL1_DMSO_200M_050219_1,7881,KYIGYARQY False True KYIGYARQY 41.60967 581.306689441204 4765475.5 7880.0 ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;nc|ENSG00000125885|Q9UJA3-2|MCM8 7.045014063517253 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7882 41.612 112.0 573860.0 25 0 47549.0 + 8848 EYVSSQLGRP 10 93 568.2923331046136 1134.570113276027 2 568.2928954958916 MULTI CID FTMS 0 0 0 7880 459727.5625 0.4305188496976915 -3 0.0591773986816406 2 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 22.736283301280096 0.4578556481593033 3 WMSTNG{I|L}RP 9 -1 59.919 0.0 0.0 5.2812 0.0 0.0 74.07275751572213 0.0 74.07275751572213 0.0 46.84262675620276 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.6307196863200843 WMSTNG{I|L}RP 5.2812 - 357 + 1 1.649 54791.1 1.0 2713 5167 7880 HBL1_DMSO_200M_050219_1,7882 HBL1_DMSO_200M_050219_1,7882,EYVSSQLGRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7883 41.615 170.0 425580.0 25 0 27454.0 + -1 VPLHECPMQ 9 105 563.7558301812886 1125.4971074293771 2 563.7549316287041 MULTI CID FTMS 0 0 0 7880 312953.875 1.0 0 0.0 3 Carbamidomethyl (C),Oxidation (M) _VPLHEC(Carbamidomethyl (C))PM(Oxidation (M))Q_ REV__ENST00000525527.5_1_11:111268336-111269853:-|nuORF 22.736283301280096 0.2418982879461534 3 VC(Carbamidomethyl (C))[C(Carbamidomethyl (C))M]VP{M(Oxidation (M))|F}P 8 -1 34.385 0.0 0.0 3.0551 0.0 0.0 0.0 132.0456942193969 132.0456942193969 14.744237387763093 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 VC(Carbamidomethyl (C))[C(Carbamidomethyl (C))M]VP{M(Oxidation (M))|F}P 3.0551 - 520 + 1 1.649 63561.8 1.0 2714 5167 7880 HBL1_DMSO_200M_050219_1,7883 HBL1_DMSO_200M_050219_1,7883,VPLHECPMQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7884 41.629 800.0 211860.0 25 0 25511.0 -1 YQFECMIQEH 10 140 672.2739518177306 1342.533350702261 2 672.2750732302666 MULTI CID FTMS 0 0 0 7880 176115.734375 0.1941791396116033 -3 0.0591773986816406 4 Oxidation (M) _YQFECM(Oxidation (M))IQEH_ ENSG00000067208|ENST00000684568|EVI5;nc|ENSG00000067208|O60447-2|EVI5;nc|ENSG00000067208|O60447|EVI5 16.149105407346934 0.5765757077271437 3 DEY[DV]PQTTN 10 -1 41.206 0.0 0.0 3.0692 0.0 0.0 0.0 177.06711755924064 177.06711755924064 7.917016986547701 0.0 0.0 0.0 0 0.4247425010840047 0.6777807052660807 0.5 0.9163865622122672 DEY[DV]PQTTN 3.0692 - 4721 + 1 1.649 124200.7 0.8600000143051147 2715 5167 7880 HBL1_DMSO_200M_050219_1,7884 HBL1_DMSO_200M_050219_1,7884,YQFECMIQEH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7885 41.636 408.0 382190.0 25 0 38917.0 + 45534 YTWHGRHNL 9 178 395.1963971140025 1182.5673619422075 3 395.1965515017509 MULTI CID FTMS 0 0 0 7880 179942.578125 1.0 0 0.0 5 Unmodified _YTWHGRHNL_ ENSG00000129173|ENST00000250024|E2F8 32.30548876998284 0.1201446275138228 3 YTWH{I|L}S 6 5 57.669 0.0 0.0 4.8766 0.0 0.0 0.0 392.1795137994751 392.1795137994751 31.700192604335307 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 YTWH{I|L}S 4.8766 - 1270 + 1 1.649 123322.0 1.0 2716 5167 7880 HBL1_DMSO_200M_050219_1,7885 HBL1_DMSO_200M_050219_1,7885,YTWHGRHNL True True YTWHGRHNL 41.636478 395.196551501751 1013334.1875 7880.0 ENSG00000129173|ENST00000250024|E2F8 5.246288935343425 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7886 41.642 297.0 531900.0 25 0 38612.0 11102 GEFQGCGCGL 10 158 485.69163599293 969.36871905266 2 485.6914245486259 MULTI CID FTMS 0 0 0 7880 152804.25 0.4524860313999693 -2 0.0364952087402343 6 Unmodified _GEFQGCGCGL_ ENST00000493734.5_1_22:20749431-20759943:+|nuORF;nc|ENSG00000185252|Q16587-5|ZNF74 13.90604991867851 0.6142120002215601 3 {[TV]|[{I|L}S]}H{M(Oxidation (M))|F} 4 10 26.688 0.0 0.0 2.7531 0.0 0.0 0.0 482.1054798771318 482.1054798771318 -0.1080840124829052 0.0 -0.1080840124829052 0.0 0 0.0 1.5228787452803376 0.5796896906561032 0.0 {[TV]|[{I|L}S]}H{M(Oxidation (M))|F} 2.7531 - 1447 1 1.649 121583.8 1.0 2717 5167 7880 HBL1_DMSO_200M_050219_1,7886 HBL1_DMSO_200M_050219_1,7886,GEFQGCGCGL False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 7887 41.656 800.0 95019.0 25 0 3728.4 + -1 SIKFSDCTINS 11 123 636.3021348533625 0 636.3026611208916 PEAK CID FTMS 0 0 0 7880 138068.40625 1.0 0 0.0 7 Carbamidomethyl (C) _SIKFSDC(Carbamidomethyl (C))TINS_ REV__ENSG00000165443|ENST00000373880|PHYHIPL;REV__ENST00000486074.2_1_10:60966594-61005348:+|nuORF;REV__nc|ENSG00000165443|Q96FC7-2|PHYHIPL 24.99096001346401 0.2903797476557471 3 {I|L}MASN 5 -1 25.578 0.0 0.0 2.0131 0.0 0.0 653.3107383573125 98.0252932184203 751.3360315757328 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9604093769761876 0.5796896906561032 {I|L}MASN 2.0131 - 294 + 1 1.649 62487.1 0.7799999713897705 2718 5167 7880 HBL1_DMSO_200M_050219_1,7887 HBL1_DMSO_200M_050219_1,7887,SIKFSDCTINS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7888 41.671 800.0 199650.0 25 0 10553.0 5927 DQAMMQDCYS 10 171 596.2089575344329 1190.4033621356657 2 596.2087280154228 MULTI CID FTMS 0 0 0 7880 108472.625 0.2619280931576503 -2 0.0364952087402343 8 Unmodified _DQAMMQDCYS_ ENSG00000157106|ENST00000446231|SMG1;ENST00000562668.1_16:18859095-18860659:-|nuORF;nc|ENSG00000157106|Q96Q15-2|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1 12.240655878213236 0.6421556946785427 3 [QA]DPSP 6 7 46.258 0.0 0.0 3.8859 0.0 0.0 0.0 592.1337447863094 592.1337447863094 26.919919059832576 0.0 0.0 0.0 0 1.3807196863200843 0.8538719643217619 0.2396518287104437 0.7614393726401688 [QA]DPSP 3.8859 - 808 1 1.649 118361.4 0.7300000190734863 2719 5167 7880 HBL1_DMSO_200M_050219_1,7888 HBL1_DMSO_200M_050219_1,7888,DQAMMQDCYS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7890 41.675 31.0 1888200.0 25 0 198050.0 + 3258 AYGPPTRAV 9 61 466.2532950808652 930.4920372285304 2 466.2533752322197 MULTI CID FTMS 0 0 0 7889 1593969.625 0.1566703808607658 9 -0.8859443664550781 1 Unmodified _AYGPPTRAV_ ENSG00000084463|ENST00000261167|WBP11 17.11289562659939 0.3734572693229295 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5 4 49.208 0.0 0.0 5.2884 0.0 0.0 0.0 442.24167810611567 442.24167810611567 38.82958396983316 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5.2884 + + 52 + 1 1.654 55370.3 1.0 2720 5168 7889 HBL1_DMSO_200M_050219_1,7890 HBL1_DMSO_200M_050219_1,7890,AYGPPTRAV False True AYGPPTRAV 41.675119 466.25337523222 220392912.0 7889.0 ENSG00000084463|ENST00000261167|WBP11 6.402777194976807 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7891 41.676 26.0 1869300.0 25 0 193680.0 + 39916 VFQKPSGVSA 10 68 510.2794559793774 1018.5443590255549 2 510.2796508669853 MULTI CID FTMS 0 0 0 7889 2034811.5 0.6960947604438212 1 -0.0921669006347656 2 Unmodified _VFQKPSGVSA_ ENSG00000189306|ENST00000323013|RRP7A;ENST00000357802.6_1_22:42970741-42976277:-|nuORF 53.40400417844725 0.0601721406801337 3 V{M(Oxidation (M))|F}QKD 5 6 47.167 0.0 0.0 4.6308 0.0 0.0 0.0 398.1945589654906 398.1945589654906 8.523627775353823 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3494850021680094 0.5 V{M(Oxidation (M))|F}QKD 4.6308 - 208 + 1 1.654 41957.3 1.0 2721 5168 7889 HBL1_DMSO_200M_050219_1,7891 HBL1_DMSO_200M_050219_1,7891,VFQKPSGVSA True True VFQKPSGVSA 41.676298 510.279650866985 43811564.0 7889.0 ENSG00000189306|ENST00000323013|RRP7A;;ENST00000357802.6_1_22:42970741-42976277:-|nuORF 8.57228136062622 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7892 41.678 96.0 719930.0 25 0 64699.0 + -1 GSPAAPCLCE 10 104 495.2076237831331 988.4006946330662 2 495.2070495486259 MULTI CID FTMS 0 0 0 7889 656895.3125 1.0 0 0.0 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))GSPAAPCLCE_ REV__SVA_D_dup1331|chr19:38854971-38856692:-|1.2988722813039473|0.199855440521665|2.7|47.0|28|3|sense 18.1463463914782 0.5430639438673815 3 {[DA]|[EG]}PAPTP 7 -1 56.642 0.0 0.0 5.7307 0.0 0.0 0.0 336.0699862115844 336.0699862115844 19.73107048415322 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.0 {[DA]|[EG]}PAPTP 5.7307 - 200 + 1 1.654 60445.9 1.0 2722 5168 7889 HBL1_DMSO_200M_050219_1,7892 HBL1_DMSO_200M_050219_1,7892,GSPAAPCLCE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7893 41.681 117.0 803560.0 25 0 138770.0 25397 NDSHTWVTV 9 118 529.747475011841 1057.4803970904818 2 529.7473632693291 MULTI CID FTMS 0 0 0 7889 544395.75 0.8886186067807483 -1 0.0770339965820312 4 Unmodified _NDSHTWVTV_ ENSG00000121898|ENST00000241305|CPXM2;ENST00000368854.7_1_10:125528237-125699754:-|nuORF 16.942295170755138 0.3780752226737986 3 [DN]SSSQR[HK] 9 6 + 28.016 0.0 0.0 2.6493 2.6493 76.955 0.0 0.0 0.0 5.580912256344 2.376430167995881 2.376430167995881 8.4556125503638 0 0.0 0.0 1.424742501084005 0.0 [DN]SSSQR[HK];[{I|L}V]A[MD]{[HG]|PP}S[DN];[DN]SSSQ[VG][HK];[DN]SSS[AG]R[HK];[DN]SSSQ[HK][VG];{[VA]|[{I|L}G]}{I|L}[MD]{[HG]|PP}S[DN];[C(Carbamidomethyl (C))S]S[RN]HAN{I|L};[KQ]G{[ES]|[DT]|[{I|L}C]}{[HG]|PP}S[DN];[DN]SSS[AG][VG][HK];[TA]PSP[RN]S[DN] 2.6493;1.8497;1.7785;1.7785;1.3932;1.2171;1.1268;0.92518;0.9119;0.8816 -;-;-;-;-;-;-;-;-;- 1006 + 1 1.654 78363.9 1.0 2723 5168 7889 HBL1_DMSO_200M_050219_1,7893 HBL1_DMSO_200M_050219_1,7893,NDSHTWVTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7894 41.683 126.0 617050.0 25 0 47543.0 + 32663 SDAYQTREI 9 103 541.759191800432 1081.5038306676638 2 541.7587768435478 MULTI CID FTMS 0 0 0 7889 438653.78125 0.0810654870521801 -2 0.1041183471679687 5 Unmodified _SDAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 70.33199760932243 0.0209706178985989 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 8 8 67.631 0.0 0.0 6.2534 0.0 0.0 0.0 199.03515374563145 199.03515374563145 55.926251677155264 0.0 0.0 0.0 0 1.274227503252014 1.5228787452803376 0.6307196863200843 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 6.2534 - 425 1 1.654 64235.9 1.0 2724 5168 7889 HBL1_DMSO_200M_050219_1,7894 HBL1_DMSO_200M_050219_1,7894,SDAYQTREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7895 41.685 86.0 658410.0 25 0 31096.0 + 33474 SIHENFSQA 9 99 516.7407727147095 1031.4669924962188 2 516.7407104372978 MULTI CID FTMS 0 0 0 7889 425585.46875 0.652312120012055 -1 0.0770339965820312 6 Unmodified _SIHENFSQA_ ENSG00000125633|ENST00000376300|CCDC93 41.8396318013385 0.0653578398400075 3 {[CP]|[EA]}S[RH]{M(Oxidation (M))|F}S[QA] 9 5 + 34.822 0.0 0.0 3.376 3.376 81.662 0.0 0.0 0.0 1.2616496779657709 20.11690260627583 1.2616496779657709 13.7898501052333 0 0.2396518287104437 0.0 0.9247425010840048 0.3054621874040891 {[CP]|[EA]}S[RH]{M(Oxidation (M))|F}S[QA];{[YC]|[HE]}{[TV]|[{I|L}S]}N{M(Oxidation (M))|F}S[QA];{[YC]|[HE]}N{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S[QA];[AG][HD]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S[QA];[AG]A{[WN]|[YH]}{[TV]|[{I|L}S]}D[QA];{[YC]|[HE]}{[TV]|[{I|L}S]}GG{M(Oxidation (M))|F}S[QA];{[YC]|[HE]}GG{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S[QA];[AG]S{[{M(Oxidation (M))|F}H]|[RQ]}{[TV]|[{I|L}S]}D[QA];[AG]A{[WN]|[YH]}{NN|[MP]|[D{I|L}]|[EV]}S[QA];[AG]S{[{M(Oxidation (M))|F}H]|[RQ]}{NN|[MP]|[D{I|L}]|[EV]}S[QA] 3.376;2.039;2.039;1.1958;0.904;0.85017;0.85017;0.81184;0.61215;0.52 -;-;-;-;-;-;-;-;-;- 185 1 1.654 49130.1 1.0 2725 5168 7889 HBL1_DMSO_200M_050219_1,7895 HBL1_DMSO_200M_050219_1,7895,SIHENFSQA True True SIHENFSQA 41.68535 516.740710437298 3106230.5 7889.0 ENSG00000125633|ENST00000376300|CCDC93 8.307717323303223 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7896 41.689 209.0 417640.0 25 0 40259.0 + 43789 YENEVALRQ 9 100 561.2830723428252 1120.5515917524503 2 561.2832519412041 MULTI CID FTMS 0 0 0 7889 328570.875 0.5715178712464044 -1 0.0770339965820312 7 Unmodified _YENEVALRQ_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 51.41523569358685 0.0372669606867193 3 YENEVA{I|L}RQ 9 0 + 100.49 0.0 0.0 8.9683 8.9683 93.46 0.0 0.0 0.0 36.47817481888637 10.803867949479766 10.803867949479766 9.018637558036673 0 1.1237125054200234 2.0 0.0 1.2704924158037798 + + YENEVA{I|L}RQ;YEQDVA{I|L}RQ;YEGGEVA{I|L}RQ;YE[AG]DVA{I|L}RQ;YEQ{[RE]|[WV]}{I|L}RQ;YE[AG]{[RE]|[WV]}{I|L}RQ 8.9683;8.1635;8.1466;7.3417;5.7026;4.876 +;-;-;-;-;- + 201 + 1 1.654 69992.6 1.0 2726 5168 7889 HBL1_DMSO_200M_050219_1,7896 HBL1_DMSO_200M_050219_1,7896,YENEVALRQ True True YENEVALRQ 41.689334 561.283251941204 3596086.75 7889.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 6.6548434893290205 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 7897 41.692 145.0 646200.0 25 0 85839.0 + 6494 EAIQRTPKI 9 123 352.5451255580798 1054.6135472744395 3 352.5447875857353 MULTI CID FTMS 0 0 0 7889 322509.90625 0.4578131893880388 -2 0.1041183471679687 8 Unmodified _EAIQRTPKI_ B2M|p.Y46Cfs*10|1|0.63|ENSG00000166710|chr15:44715491-44715492|TA/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF 17.11289562659939 0.3734572693229295 3 {I|L} 1 8 12.474 0.0 0.0 1.1828 0.0 0.0 923.518650889477 0.0 923.518650889477 0.0 1.054266826574466 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1828 + + 252 + 1 1.654 84411.2 1.0 2727 5168 7889 HBL1_DMSO_200M_050219_1,7897 HBL1_DMSO_200M_050219_1,7897,EAIQRTPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7898 41.695 161.0 598790.0 25 0 44743.0 + + 21146 RVLEGPAAPSA 11 114 534.2946866927822 1066.5748204523643 2 534.2920410037041 MULTI CID FTMS 0 0 0 7889 231238.46875 0.675367199028591 -1 0.0770339965820312 9 Unmodified _LPARPRCPTG_ ENST00000287652.8_1_3:10290629-10291047:+|nuORF 27.628801355627647 0.3479284626772844 3 {I|L}P[H{I|L}][VS]{M(Oxidation (M))|F}P{[SA]|[TG]} 10 -1 + 44.045 0.0 0.0 4.1296 4.1296 84.735 0.0 0.0 0.0 26.324543621168388 5.347040357455839 5.347040357455839 22.5 0 0.75 1.5228787452803376 0.6421590589602533 0.0 {I|L}P[H{I|L}][VS]{M(Oxidation (M))|F}P{[SA]|[TG]};{I|L}[{M(Oxidation (M))|F}T]V[VS]{M(Oxidation (M))|F}P{[SA]|[TG]};{I|L}{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[VS]{M(Oxidation (M))|F}P{[SA]|[TG]};{I|L}[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}[{I|L}T]AP{[SA]|[TG]} 4.1296;2.02;1.7378;1.6407 -;-;-;- 150 + 1 1.654 84432.0 1.0 2728 5168 7889 HBL1_DMSO_200M_050219_1,7898 HBL1_DMSO_200M_050219_1,7898,LPARPRCPTG False False RVLEGPAAPSA 41.695427 534.292041003704 991656.75 7889.0 ENST00000287652.8_1_3:10290629-10291047:+|nuORF 3.1310221354166665 2.0 False 11.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7899 41.703 450.0 344290.0 25 0 20830.0 + 24825 MPKKYEHVI 9 191 382.21059827176106 1143.6099654154832 3 382.2109252810478 MULTI CID FTMS 0 0 0 7889 236192.171875 1.0 0 0.0 10 Unmodified _MPKKYEHVI_ ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP 19.62595529434964 0.305431704817896 3 MPKKYEHV{I|L} 9 0 + 36.998 0.0 0.0 3.2352 3.2352 75.635 0.0 0.0 0.0 -0.11526187828089 12.98332479720628 -0.11526187828089 5.674100046527364 0 0.4247425010840047 0.0 0.0 0.0 + + MPKKYEHV{I|L};[YV]VPGHN{M(Oxidation (M))|F}V{I|L};M{I|L}[{I|L}T]GHN{M(Oxidation (M))|F}V{I|L};MPKKHYEV{I|L};[YV]VPK[CS]HV{I|L};M{I|L}[{I|L}T]K[CS]HV{I|L};[YV]PKV[CS]HV{I|L};[YV]PVGHN{M(Oxidation (M))|F}V{I|L};[YV]PRHN{M(Oxidation (M))|F}V{I|L};[YV]VPKKC(Carbamidomethyl (C))GPP 3.2352;2.739;2.6498;2.6425;2.479;2.3898;2.3698;2.2126;2.0586;1.9953 +;-;-;-;-;-;-;-;-;- + 1193 + 1 1.654 128280.6 1.0 2729 5168 7889 HBL1_DMSO_200M_050219_1,7899 HBL1_DMSO_200M_050219_1,7899,MPKKYEHVI False True MPKKYEHVI 41.7034 382.210925281048 1369801.25 7889.0 nc|ENSG00000080603|Q6ZRS2-3|SRCAP;;ENSG00000080603|ENST00000262518|SRCAP;;nc|ENSG00000080603|Q6ZRS2-2|SRCAP 4.202284653981526 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7900 41.717 800.0 231170.0 25 0 26578.0 -1 0 113 641.6334923562225 1921.878647668868 3 641.9680053591728 MULTI CID FTMS 0 0 0 7889 184590.140625 0.8381137517263288 -1 0.0770339965820312 11 3 [{I|L}V][YV]{[NV]|[RG]}TYSYGEAQMW 16 -1 [{I|L}V][YV]{[NV]|[RG]}T + + 70.205 -1.7394 -0.22061 3.6529 3.6529 51.615 0.0 0.0 0.0 0.0 31.055745725078268 0.0 0.0 0 1.924742501084005 0.0 0.805462187404089 0.535666875892183 [{I|L}V][YV]{[NV]|[RG]}TYSYGEAQMW 3.6529 - 3186 + 1 1.654 139913.3 0.9200000166893004 2730 5168 7889 HBL1_DMSO_200M_050219_1,7900 HBL1_DMSO_200M_050219_1,7900, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7901 41.731 800.0 97348.0 25 0 8050.4 -1 0 63 681.9168817737625 3404.5480265358124 5 682.1179077029228 MULTI CID FTMS 0 0 0 7889 177792.203125 1.0 0 0.0 12 3 Q 1 -1 10.485 0.0 0.0 0.30796 0.0 0.0 1680.7554723934427 1592.728826571551 3273.4842989649937 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 Q 0.30796 - 18 + 1 1.654 63200.8 0.8999999761581421 2731 5168 7889 HBL1_DMSO_200M_050219_1,7901 HBL1_DMSO_200M_050219_1,7901, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7902 41.745 800.0 278380.0 25 0 11452.0 -1 RPCPWNYGQF 10 136 662.7997666038933 1323.5849802745863 2 662.7992431521416 MULTI CID FTMS 0 0 0 7889 198538.046875 0.4773807563907884 -1 0.0770339965820312 13 Carbamidomethyl (C) _RPC(Carbamidomethyl (C))PWNYGQF_ ENSG00000104055|ENST00000220420|TGM5;nc|ENSG00000104055|O43548-2|TGM5 20.453626601364224 0.5043500229302764 3 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F} 13 -1 + 129.84 0.0 0.0 9.8095 9.8095 87.153 0.0 0.0 0.0 2.632414347745822 16.642078980768076 2.632414347745822 2.632414347745822 0 1.0629529932484498 1.2218487496163564 0.6237125054200234 2.278659694992122 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};[AG]NA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};[AG]GQ{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};[AG]GGA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};[AG]NAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F} 9.8095;9.6106;9.4646;9.3799;9.3555;9.2657;9.1241;9.1241;9.1241;9.0769 -;-;-;-;-;-;-;-;-;- 25088 1 1.654 161823.9 0.8899999856948853 2732 5168 7889 HBL1_DMSO_200M_050219_1,7902 HBL1_DMSO_200M_050219_1,7902,RPCPWNYGQF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7903 41.759 800.0 247170.0 25 0 11219.0 -1 ISPSRMPQPPN 11 155 620.3132969374445 1238.612040941689 2 620.3148071169853 MULTI CID FTMS 0 0 0 7889 156701.03125 0.1703590691927641 35 -2.884471893310547 14 Oxidation (M) _ISPSRM(Oxidation (M))PQPPN_ ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP 18.373094154950223 0.6529654022026722 3 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP 9 -1 66.314 0.0 0.0 5.3539 0.0 0.0 0.0 354.1446086509265 354.1446086509265 40.53008633652151 0.0 0.0 0.0 0 2.6549471895720984 1.0457574905606752 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP 5.3539 - 3128 1 1.654 144802.3 0.8700000047683716 2733 5168 7889 HBL1_DMSO_200M_050219_1,7903 HBL1_DMSO_200M_050219_1,7903,ISPSRMPQPPN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7904 41.763 137.0 617420.0 25 0 75147.0 + 26636 NWRLSGCVL 9 85 349.850594260251 0 349.8503600955009 PEAK CID FTMS 0 0 0 7889 146978.765625 0.3309480265463729 -2 0.1041183471679687 15 Unmodified _NWRLSGCVL_ REV__ENST00000597945.1_1_19:42724558-42728434:+|nuORF 7.910154910731844 0.3362437653303669 3 PA 2 -1 10.969 0.0 0.0 1.5722 0.0 0.0 114.34226219077614 412.2313326471313 526.5735948379074 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PA 1.5722 - 20 + 1 1.654 73108.2 1.0 2734 5168 7889 HBL1_DMSO_200M_050219_1,7904 HBL1_DMSO_200M_050219_1,7904,NWRLSGCVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7906 41.767 2.8 21761000.0 25 0 3040400.0 + 5778 DPPPGSHVI 9 83 459.7369120917008 917.4592712502016 2 459.7377197146416 MULTI CID FTMS 0 0 0 7905 22508322.0 0.8972072968839911 -1 0.0921669006347656 1 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 39.957323273325 0.0756908302845263 3 DPPP 4 5 57.691 0.0 0.0 6.2881 0.0 0.0 0.0 508.25312219791255 508.25312219791255 45.38364391835536 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + DPPP 6.2881 + + 134 + 1 1.654 52265.2 1.0 2735 5169 7905 HBL1_DMSO_200M_050219_1,7906 HBL1_DMSO_200M_050219_1,7906,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7907 41.77 122.0 602650.0 25 0 92403.0 + 11354 GFRAGGPA 8 107 366.6928590994936 731.3711652657872 2 366.6922790408134 MULTI CID FTMS 0 0 0 7905 442284.8125 0.371002910329636 2 -0.2173500061035156 2 Unmodified _GFRAGGPA_ REV__ENSG00000179954|ENST00000389623|SSC5D;REV__ENST00000588254.1_1_19:56000611-56002653:+|nuORF;REV__nc|ENSG00000179954|A1L4H1-2|SSC5D 0.7936320650641473 0.8195151834710337 3 S{I|L} 2 -1 43.756 0.0 0.0 5.9827 0.0 0.0 0.0 528.231456487077 528.231456487077 10.040915035013851 0.0 0.0 0.0 0 0.5796896906561032 2.0 0.0 0.0 S{I|L} 5.9827 - 96 + 1 1.654 62936.5 1.0 2736 5169 7905 HBL1_DMSO_200M_050219_1,7907 HBL1_DMSO_200M_050219_1,7907,GFRAGGPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7908 41.771 18.0 3049000.0 25 0 198830.0 + 38659 TTISKVSQV 9 79 481.7790405561032 961.5435281790064 2 481.7793456912041 MULTI CID FTMS 0 0 0 7905 3527614.0 1.0 0 0.0 3 Unmodified _TTISKVSQV_ ENSG00000065183|ENST00000349139|WDR3 39.94969957227396 0.0757326808254658 3 [PS]{I|L}[R{I|L}]P 6 8 22.192 0.0 0.0 2.3079 0.0 0.0 0.0 295.11342922497505 295.11342922497505 4.394746494639247 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.5 [PS]{I|L}[R{I|L}]P 2.3079 - 220 1 1.654 45247.4 1.0 2737 5169 7905 HBL1_DMSO_200M_050219_1,7908 HBL1_DMSO_200M_050219_1,7908,TTISKVSQV True True TTISKVSQV 41.770983 481.779345691204 20269716.0 7905.0 ENSG00000065183|ENST00000349139|WDR3 6.301581700642903 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7909 41.772 48.0 815430.0 25 0 69570.0 + 5834 DPSQPQTTI 9 77 493.7427625101288 985.4709720870576 2 493.7429382205009 MULTI CID FTMS 0 0 0 7905 1096853.0 0.8433464350190221 -1 0.0921669006347656 4 Unmodified _DPSQPQTTI_ ENSG00000005339|ENST00000262367|CREBBP;ENSG00000100393|ENST00000263253|EP300;nc|ENSG00000005339|Q92793-2|CREBBP 21.74664581756881 0.2544899275067181 3 T{I|L} 2 7 20.573 0.0 0.0 2.0877 0.0 0.0 753.3284530214312 0.0 753.3284530214312 0.0 1.8444719792741893 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 + T{I|L} 2.0877 + + 259 + 1 1.654 38161.0 1.0 2738 5169 7905 HBL1_DMSO_200M_050219_1,7909 HBL1_DMSO_200M_050219_1,7909,DPSQPQTTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7910 41.774 71.0 925200.0 25 0 88819.0 -1 0 98 472.27527266301774 471.26799619641776 1 472.2750732302666 MULTI CID FTMS 0 0 0 7905 566655.9375 0.1153030659428345 -12 0.46868896484375 5 3 [VS]{I|L}[PG] 5 -1 + 16.196 0.0 0.0 3.4368 3.4368 81.238 0.0 0.0 0.0 7.162033201422382 3.142462198985765 3.142462198985765 11.479147981320512 0 0.0 0.958607314841775 0.1271595765414318 0.0 [VS]{I|L}[PG];{[TV]|[{I|L}S]}V[PG] 3.4368;1.001 -;- 23 1 1.654 58049.5 1.0 2739 5169 7905 HBL1_DMSO_200M_050219_1,7910 HBL1_DMSO_200M_050219_1,7910, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7911 41.776 89.0 703780.0 25 0 41836.0 23022 LSIYMDTL 8 101 478.2457954641416 954.4770379950832 2 478.2462036013603 MULTI CID FTMS 0 0 0 7905 312680.3125 0.7865280356211218 -1 0.0921669006347656 6 Unmodified _LSIYMDTL_ ENSG00000165678|ENST00000372134|GHITM 23.1484247019978 0.5573009939494978 3 [{I|L}T][HN]AAT{I|L}D 9 6 + 34.833 0.0 0.0 3.6494 3.6494 76.752 0.0 0.0 0.0 3.5464379997191813 12.252976912876886 3.5464379997191813 5.862657241447302 0 0.0 1.0457574905606752 0.3494850021680094 0.0 [{I|L}T][HN]AAT{I|L}D;{[TV]|[{I|L}S]}[HQ]AAT{I|L}D;[RP][DP]AAT{I|L}D;{[VA]|[{I|L}G]}[TA][HQ]T{I|L}D;[{I|L}T][HN]AADT{I|L};[{I|L}T]Q[HQ]T{I|L}D;[TA][RH]AAT{I|L}D;[{M(Oxidation (M))|F}V]TAA[HN]PV;{[TV]|[{I|L}S]}[HQ]AADT{I|L};[{I|L}T][HN]AWT{I|L} 3.6494;3.0352;2.8084;2.7944;2.5283;2.3795;2.1241;1.9838;1.9141;1.8496 -;-;-;-;-;-;-;-;-;- 408 1 1.654 53594.3 1.0 2740 5169 7905 HBL1_DMSO_200M_050219_1,7911 HBL1_DMSO_200M_050219_1,7911,LSIYMDTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7912 41.779 130.0 623480.0 25 0 66510.0 -1 ALGRMCTV 8 112 462.2248988672173 922.4352448012346 2 462.2249633669853 MULTI CID FTMS 0 0 0 7905 288575.53125 1.0 0 0.0 7 Carbamidomethyl (C),Oxidation (M) _ALGRM(Oxidation (M))C(Carbamidomethyl (C))TV_ ENSG00000107937|ENST00000360803|GTPBP4;ENST00000491635.1_1_10:1042067-1042223:+|nuORF;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 18.13498045792455 0.6430038125133779 3 RVTV 4 -1 36.414 0.0 0.0 3.9476 0.0 0.0 449.1515370099625 0.0 449.1515370099625 0.0 24.50318762307695 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 RVTV 3.9476 - 222 1 1.654 67966.2 1.0 2741 5169 7905 HBL1_DMSO_200M_050219_1,7912 HBL1_DMSO_200M_050219_1,7912,ALGRMCTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7913 41.784 297.0 447620.0 25 0 92077.0 -1 0 149 416.21092424292806 415.20364777632807 1 416.2113220095634 MULTI CID FTMS 0 0 0 7905 285782.53125 1.0 0 0.0 8 3 T 1 -1 15.159 0.0 0.0 3.6509 0.0 0.0 296.14490709204915 0.0 296.14490709204915 0.0 5.625824069613943 0.0 0.0 0 0.0 0.0 0.2059771852360797 0.0 T 3.6509 - 41 + 1 1.654 107502.9 1.0 2742 5169 7905 HBL1_DMSO_200M_050219_1,7913 HBL1_DMSO_200M_050219_1,7913, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7914 41.787 156.0 325640.0 25 0 33548.0 956 AFLINGYTSM 10 82 558.7711756368537 1115.5277983405074 2 558.7714721560478 MULTI CID FTMS 0 0 0 7905 257352.609375 0.404933513533607 2 -0.2173500061035156 9 Unmodified _AFLINGYTSM_ ENSG00000185046|ENST00000683438|ANKS1B;ENST00000552245.5_1_12:99225710-99548222:-|nuORF;nc|ENSG00000185046|Q7Z6G8-10|ANKS1B;nc|ENSG00000185046|Q7Z6G8-2|ANKS1B;nc|ENSG00000185046|Q7Z6G8-3|ANKS1B;nc|ENSG00000185046|Q7Z6G8-4|ANKS1B;nc|ENSG00000185046|Q7Z6G8-5|ANKS1B;nc|ENSG00000185046|Q7Z6G8-6|ANKS1B;nc|ENSG00000185046|Q7Z6G8-7|ANKS1B;nc|ENSG00000185046|Q7Z6G8-8|ANKS1B;nc|ENSG00000185046|Q7Z6G8|ANKS1B 22.736283301280096 0.4578556481593033 3 TSM 3 7 35.846 0.0 0.0 3.2134 0.0 0.0 778.3958607404312 0.0 778.3958607404312 0.0 4.90417829939986 0.0 0.0 0 0.805462187404089 0.0 0.7614393726401688 0.0 + TSM 3.2134 + + 33 1 1.654 47580.5 1.0 2743 5169 7905 HBL1_DMSO_200M_050219_1,7914 HBL1_DMSO_200M_050219_1,7914,AFLINGYTSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7915 41.793 352.0 305990.0 25 0 26222.0 + + 33916 KFEDKTVAY 9 159 550.7844328013706 1099.554312669541 2 550.7839843630791 MULTI CID FTMS 0 0 0 7905 195050.453125 1.0 0 0.0 10 Unmodified _SLGFDSIKAY_ ENST00000434494.5_1_15:44038867-44063413:+|nuORF;ENSG00000167004|ENST00000300289|PDIA3 55.50274090549119 0.048383292844968 3 {[VA]|[{I|L}G]}GEYTVKAY 10 -1 + 49.959 0.0 0.0 4.5435 4.5435 79.397 0.0 0.0 0.0 6.020599913279625 5.836134377877329 5.836134377877329 5.98181473782688 0 0.0 1.6989700043360187 0.9604093769761876 0.0 {[VA]|[{I|L}G]}GEYTVKAY;{[VA]|[{I|L}G]}GEYTVAKY;[VG]AEYTVKAY;{[VA]|[{I|L}G]}GEYTKVAY;{[VA]|[{I|L}G]}GEYKTVAY;{[QV]|[N{I|L}]|[RA]|[KV]}EYTVKAY;[VG]AEYTVAKY;{[VA]|[{I|L}G]}GEYKATVY;{[VA]|[{I|L}G]}GEYTKAVY;{[VA]|[{I|L}G]}GEYKTAVY 4.5435;3.9995;3.996;3.7233;3.7193;3.5572;3.452;3.4051;3.2966;3.2926 -;-;-;-;-;-;-;-;-;- 3035 1 1.654 85165.5 1.0 2744 5169 7905 HBL1_DMSO_200M_050219_1,7915 HBL1_DMSO_200M_050219_1,7915,SLGFDSIKAY False False KFEDKTVAY 41.793446 550.783984363079 996445.25 7905.0 ENST00000434494.5_1_15:44038867-44063413:+|nuORF;;ENSG00000167004|ENST00000300289|PDIA3 3.0759329398473105 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7916 41.796 139.0 407510.0 25 0 43974.0 + -1 PPPMPQGPV 9 97 468.2373605028965 0 468.2367736697197 PEAK CID FTMS 0 0 0 7905 211209.515625 0.8079989173608351 15 -1.3801231384277344 11 Oxidation (M) _PPPM(Oxidation (M))PQGPV_ REV__ENSG00000122359|ENST00000422982|ANXA11;REV__nc|ENSG00000122359|P50995-2|ANXA11 9.347437153973935 0.3197567915069932 3 PP 2 -1 7.9588 0.0 0.0 0.8517 0.0 0.0 312.1486579180992 425.1811922662719 737.3298501843711 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.8517 + + 72 + 1 1.654 45905.8 1.0 2745 5169 7905 HBL1_DMSO_200M_050219_1,7916 HBL1_DMSO_200M_050219_1,7916,PPPMPQGPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7917 41.8 204.0 428940.0 25 0 37703.0 + 12007 GPPSHLQS 8 118 411.7088300115392 0 411.7085449099541 PEAK CID FTMS 0 0 0 7905 162259.34375 0.3891260082632055 -1 0.0921669006347656 12 Unmodified _GPPSHLQS_ REV__ENSG00000189050|ENST00000305783|RNFT1;REV__ENST00000477207.2_1_17:58039882-58042045:-|nuORF;REV__ENST00000586083.5_1_17:58037427-58042045:-|nuORF;REV__nc|ENSG00000189050|Q5M7Z0-2|RNFT1;REV__nc|ENSG00000189050|Q5M7Z0-3|RNFT1 16.942295170755138 0.4635191396245973 3 {I|L}{M(Oxidation (M))|F}G 3 -1 15.93 0.0 0.0 1.9393 0.0 0.0 233.1013963053087 268.10533196862013 501.2067282739288 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}G 1.9393 - 24 + 1 1.654 70211.5 1.0 2746 5169 7905 HBL1_DMSO_200M_050219_1,7917 HBL1_DMSO_200M_050219_1,7917,GPPSHLQS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7918 41.806 317.0 293840.0 25 0 39347.0 + 2452 AQVKPDGTYV 10 116 539.283225314216 0 539.2831909060478 PEAK CID FTMS 0 0 0 7905 147367.015625 0.3129081471270841 -1 0.0921669006347656 13 Unmodified _AQVKPDGTYV_ ENSG00000161533|ENST00000293217|ACOX1;ENST00000589744.1_1_17:73949530-73951667:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1 38.17557092003332 0.1299896074792053 3 YV{[CP]|[EA]}V 5 7 18.601 0.0 0.0 1.7278 0.0 0.0 316.1756087639273 196.07308374576408 512.2486925096914 0.0 0.0 0.0 0.0 0 1.0 0.0 0.6549471895720984 0.0 YV{[CP]|[EA]}V 1.7278 - 89 + 1 1.654 78489.1 1.0 2747 5169 7905 HBL1_DMSO_200M_050219_1,7918 HBL1_DMSO_200M_050219_1,7918,AQVKPDGTYV False True AQVKPDGTYV 41.805914 539.283190906048 2728976.75 7905.0 ENST00000589744.1_1_17:73949530-73951667:-|nuORF;;nc|ENSG00000161533|Q15067-3|ACOX1;;nc|ENSG00000161533|Q15067|ACOX1;;ENSG00000161533|ENST00000293217|ACOX1 7.268537362416585 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7919 41.813 376.0 318670.0 25 0 30879.0 + 9869 FPFKCPQSPP 10 145 574.2843506157735 1146.554148298347 2 574.2844726443291 MULTI CID FTMS 0 0 0 7905 131160.5625 0.6651635869062645 -1 0.0921669006347656 14 Unmodified _FPFKCPQSPP_ REV__ENST00000357084.7_1_16:28915626-28915746:+|nuORF 9.38312468134398 0.6832340498775793 3 [{I|L}P]{[WS]|[C(Carbamidomethyl (C)){I|L}]}NSAAV 9 -1 27.25 0.0 0.0 2.3767 0.0 0.0 0.0 218.06768095883413 218.06768095883413 9.190459212241423 0.0 0.0 0.0 0 0.0 0.958607314841775 0.7134679910804405 0.3494850021680094 [{I|L}P]{[WS]|[C(Carbamidomethyl (C)){I|L}]}NSAAV 2.3767 - 381 1 1.654 95265.9 1.0 2748 5169 7905 HBL1_DMSO_200M_050219_1,7919 HBL1_DMSO_200M_050219_1,7919,FPFKCPQSPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7920 41.826 800.0 431650.0 25 0 22847.0 + 20348 YPNVGKSSV 9 266 475.7803318343784 0 475.7801696658134 PEAK CID FTMS 0 0 0 7905 136137.25 1.0 0 0.0 15 Unmodified _LLFTVMRA_ ENST00000469191.1_1_1:38041920-38047841:-|nuORF;ENSG00000134697|ENST00000373062|GNL2 9.347437153973935 0.5488964601725408 3 PNT 3 7 15.379 0.0 0.0 1.6196 0.0 0.0 163.12198911094453 471.2609652154906 634.3829543264352 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.6861818737241735 PNT 1.6196 - 708 + 1 1.654 255241.4 0.7400000095367432 2749 5169 7905 HBL1_DMSO_200M_050219_1,7920 HBL1_DMSO_200M_050219_1,7920,LLFTVMRA False False YPNVGKSSV 41.826489 475.780169665813 1798065.375 7905.0 ENST00000469191.1_1_1:38041920-38047841:-|nuORF;;ENSG00000134697|ENST00000373062|GNL2 3.740091800689697 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7921 41.84 800.0 134480.0 25 0 20313.0 -1 0 66 1123.3671395192748 2244.7197261053498 2 1123.364550769329 MULTI CID FTMS 0 0 0 7905 108489.4375 0.3991519035834729 -5 0.2283782958984375 16 3 D 1 -1 6.9897 0.0 0.0 0.31138 0.0 0.0 1327.2594122399184 799.4110645430295 2126.670476782948 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.31138 - 24 + 1 1.654 84381.9 0.5899999737739563 2750 5169 7905 HBL1_DMSO_200M_050219_1,7921 HBL1_DMSO_200M_050219_1,7921, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7922 41.848 330.0 386110.0 25 0 87762.0 19342 LENIMRIS 8 145 488.268801013426 0 488.2671081423759 PEAK CID FTMS 0 0 0 7905 109202.0 0.3143086707542955 -11 0.4013671875 17 Unmodified _LENIMRIS_ ENSG00000165323|ENST00000525166|FAT3;nc|ENSG00000165323|Q8TDW7|FAT3 12.531546534597751 0.5131024102181418 3 C 1 8 7.7866 0.0 0.0 0.79902 0.0 0.0 487.3085827571667 381.1764315240844 868.4850142812511 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 C 0.79902 - 21 + 1 1.654 99281.0 1.0 2751 5169 7905 HBL1_DMSO_200M_050219_1,7922 HBL1_DMSO_200M_050219_1,7922,LENIMRIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7924 41.852 39.0 1172400.0 25 0 212450.0 + 5051 DGYEQAARV 9 75 504.7406236745259 1007.466694415852 2 504.7410156130791 MULTI CID FTMS 0 0 0 7923 792456.25 0.1270152970923591 8 -0.7838630676269531 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 36.12702656103203 0.0967173616627612 3 [YG]DEQAARV 9 2 [YG]D + + 30.993 25.929 7.7373 3.0764 3.0764 50.357 0.0 0.0 0.0 0.0 5.064670615494045 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.3054621874040891 [YG]DEQAARV 3.0764 - 57 + 1 1.657 44747.1 1.0 2752 5170 7923 HBL1_DMSO_200M_050219_1,7924 HBL1_DMSO_200M_050219_1,7924,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7925 41.853 45.0 856760.0 25 0 89863.0 + 3749 DAGGHNVTI 9 68 442.2171223940662 882.4196918549325 2 442.2170593142509 MULTI CID FTMS 0 0 0 7923 1135296.875 0.5395721385054552 1 -0.1325340270996093 2 Unmodified _DAGGHNVTI_ ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1 24.020572477871973 0.2255576514309169 3 {[DA]|[EG]}[HN]NV[{I|L}T] 8 2 + 36.132 0.0 0.0 4.0946 4.0946 82.042 0.0 0.0 0.0 11.170912423450403 15.674100046527355 11.170912423450403 9.262137858390812 0 0.4247425010840047 2.0 0.0 0.0 {[DA]|[EG]}[HN]NV[{I|L}T];{[DA]|[EG]}[HN]GGV[{I|L}T];[HN]N{[DA]|[EG]}V[{I|L}T];[HN]NV{[DA]|[EG]}[{I|L}T];[HN]{[DA]|[EG]}NV[{I|L}T];[{I|L}T]{[{M(Oxidation (M))|F}C]|[YS]}{[DA]|[EG]}[{I|L}T];[HN]GG{[DA]|[EG]}V[{I|L}T];[HN]GGV{[DA]|[EG]}[{I|L}T];[HN]{[DA]|[EG]}GGV[{I|L}T] 4.0946;3.045;2.3688;2.3688;1.8281;1.7183;1.3192;1.3192;0.77849 -;-;-;-;-;-;-;-;- 88 1 1.657 37636.3 1.0 2753 5170 7923 HBL1_DMSO_200M_050219_1,7925 HBL1_DMSO_200M_050219_1,7925,DAGGHNVTI False True DAGGHNVTI 41.853337 442.217059314251 11275158.0 7923.0 ENSG00000173692|ENST00000308696|PSMD1;;nc|ENSG00000173692|Q99460-2|PSMD1 5.725690046946208 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7926 41.855 65.0 1031700.0 25 0 99716.0 + 13731 HQVPAVSSV 9 101 462.2507880449406 922.4870231566812 2 462.2512390017509 MULTI CID FTMS 0 0 0 7923 535937.875 0.0705401806130086 -2 0.1769828796386718 3 Unmodified _HQVPAVSSV_ ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2 65.23502041540118 0.0231836506122253 3 {[CT]|[{M(Oxidation (M))|F}G]}SVA{[QD]|[EN]|[WG]|[KD]|[RS]}TV 9 6 + 38.241 0.0 0.0 4.1454 4.1454 80.246 0.0 0.0 0.0 17.421525057367408 1.69581630832797 1.69581630832797 8.38045629527841 0 0.3252574989159953 0.0 0.9916440611282626 0.0 {[CT]|[{M(Oxidation (M))|F}G]}SVA{[QD]|[EN]|[WG]|[KD]|[RS]}TV;[HQ]VPAVS[VS];{[CT]|[{M(Oxidation (M))|F}G]}SVA{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}AVSW;{[CT]|[{M(Oxidation (M))|F}G]}[WK]{I|L}SSV;{[QV]|[N{I|L}]|[RA]|[KV]}HPAVS[VS];[AG]HVPAVS[VS];[VG]AHPAVS[VS];[VS]S{[VA]|[{I|L}G]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W;[AG]VHPAVS[VS] 4.1454;3.2369;2.9379;2.4517;2.3473;2.3133;2.0279;1.9725;1.831;1.3753 -;+;-;-;-;-;-;-;-;- + 472 + 1 1.657 55880.2 1.0 2754 5170 7923 HBL1_DMSO_200M_050219_1,7926 HBL1_DMSO_200M_050219_1,7926,HQVPAVSSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7927 41.857 106.0 697170.0 25 0 58622.0 + 5453 DLQPRPQPV 9 109 525.2904313879149 1048.5663098426296 2 525.2910644412041 MULTI CID FTMS 0 0 0 7923 508596.5625 0.1296172061505385 13 -1.1982688903808594 4 Unmodified _DLQPRPQPV_ REV__ENSG00000168356|ENST00000302328|SCN11A;REV__nc|ENSG00000168356|Q9UI33-2|SCN11A;REV__nc|ENSG00000168356|Q9UI33-3|SCN11A 26.88365393820708 0.1891292719743517 3 [{I|L}A][Y{I|L}]DD{I|L}VQ 9 -1 [{I|L}A][Y{I|L}]DD{I|L} + + 29.821 2.2971 0.28591 2.8439 2.8439 49.903 0.0 0.0 0.0 0.0 16.588709367037282 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.805462187404089 [{I|L}A][Y{I|L}]DD{I|L}VQ 2.8439 - 413 + 1 1.657 64715.3 1.0 2755 5170 7923 HBL1_DMSO_200M_050219_1,7927 HBL1_DMSO_200M_050219_1,7927,DLQPRPQPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7928 41.86 128.0 597480.0 25 0 46614.0 + 39104 TWPSPRTTPH 10 90 393.868493460061 1178.583650980383 3 393.8683654665947 MULTI CID FTMS 0 0 0 7923 480558.3125 1.0 0 0.0 5 Unmodified _TWPSPRTTPH_ ENST00000294189.10_2_3:52028123-52029875:-|nuORF 21.53697664764585 0.484802182336468 3 {[WT]|[RM]}PSH 5 5 24.08 0.0 0.0 2.0432 0.0 0.0 0.0 567.2905367486936 567.2905367486936 10.127881306118452 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[WT]|[RM]}PSH 2.0432 - 121 + 1 1.657 68415.1 1.0 2756 5170 7923 HBL1_DMSO_200M_050219_1,7928 HBL1_DMSO_200M_050219_1,7928,TWPSPRTTPH False True TWPSPRTTPH 41.85978 393.868365466595 22708700.625 7923.0 ENST00000294189.10_2_3:52028123-52029875:-|nuORF 6.5584384600321455 3.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7929 41.863 170.0 515850.0 25 0 40235.0 34700 SPTTPVPTAV 10 125 485.2661214689306 968.5176900046612 2 485.2659789919853 MULTI CID FTMS 0 0 0 7923 455562.53125 0.9731377810270588 1 -0.1325340270996093 6 Unmodified _SPTTPVPTAV_ HERVFH21-int_dup68|chrX:64848898-64850686:+|1.1618635505066113|0.1868304972504996|2.64|46.0|99|3|anti-sense 36.12702656103203 0.1984647928738587 3 P[TP]AV 5 5 36.585 0.0 0.0 3.7774 0.0 0.0 485.24412734199376 0.0 485.24412734199376 0.0 25.47589873476652 0.0 0.0 0 1.0387254899964358 0.0 1.0 0.0 P[TP]AV 3.7774 - 267 1 1.657 68584.9 1.0 2757 5170 7923 HBL1_DMSO_200M_050219_1,7929 HBL1_DMSO_200M_050219_1,7929,SPTTPVPTAV False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 7930 41.866 162.0 321920.0 25 0 24696.0 + 21175 LPCQAQEKV 9 88 508.2654701570336 1014.5163873808672 2 508.2659789919853 MULTI CID FTMS 0 0 0 7923 358673.5 0.2445470984817971 2 -0.2273101806640625 7 Unmodified _LPCQAQEKV_ ENST00000504562.1_1_5:40834363-40834613:-|nuORF 38.61474834105838 0.0830609365873449 3 {I|L}PCQAQEKV 9 0 + 72.499 0.0 0.0 7.1461 7.1461 91.587 0.0 0.0 0.0 51.32178130147889 9.13876029322087 9.13876029322087 9.208187539523756 0 0.7302046884880937 2.0 0.0 0.7742275032520141 + + {I|L}PCQAQEKV;{I|L}PCQA[AG]EKV;{I|L}PC[AG]AQEKV;{I|L}PC{[HG]|PP}[RH]PV;{I|L}PC[AG]A[AG]EKV;{I|L}P[C(Carbamidomethyl (C))H][RH]PV 7.1461;6.2385;6.2385;5.5568;5.3351;4.5738 +;-;-;-;-;- + 195 + 1 1.657 48155.9 1.0 2758 5170 7923 HBL1_DMSO_200M_050219_1,7930 HBL1_DMSO_200M_050219_1,7930,LPCQAQEKV True True LPCQAQEKV 41.866274 508.265978991985 8396058.0 7923.0 ENST00000504562.1_1_5:40834363-40834613:-|nuORF 6.656559467315674 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7931 41.869 160.0 473090.0 25 0 38490.0 + 28456 YPHEPTAV 8 111 457.2245175884837 912.4344822437672 2 457.2248412966728 MULTI CID FTMS 0 0 0 7923 346047.34375 0.9671614480981702 -1 0.0848159790039062 8 Unmodified _PTEHPSVF_ ENSG00000159147|ENST00000303071|DONSON 19.438996006549623 0.6237395211498085 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ETPAYV 8 5 + 32.56 0.0 0.0 3.5685 3.5685 70.333 0.0 0.0 0.0 1.3200105795410335 8.667053245199625 1.3200105795410335 1.3200105795410335 0 0.3182503180159344 0.958607314841775 1.1989700043360187 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ETPAYV;{[YC]|[HE]}PTPAYV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ETAPYV;{[YC]|[HE]}PTAPYV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ETA[SG][KS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PYV;{[YC]|[HE]}PTA[SG][KS];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ET{[QS]|[NT]}[KS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W[VS]YV;{[YC]|[HE]}PT{[QS]|[NT]}[KS] 3.5685;3.4238;3.2105;3.0659;1.7111;1.6609;1.5664;1.5534;1.5533;1.4087 -;-;-;-;-;-;-;-;-;- 415 1 1.657 63026.5 1.0 2759 5170 7923 HBL1_DMSO_200M_050219_1,7931 HBL1_DMSO_200M_050219_1,7931,PTEHPSVF False False YPHEPTAV 41.869432 457.224841296673 4178011.25 7923.0 ENSG00000159147|ENST00000303071|DONSON 0.0149865200122197 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7932 41.873 167.0 602440.0 25 0 66878.0 + 15192 IPEKTVRVV 9 102 347.55352877603474 1039.6387569283042 3 347.5536376833916 MULTI CID FTMS 0 0 0 7923 253312.5 0.6920633245625876 2 -0.2273101806640625 9 Unmodified _IPEKTVRVV_ ENSG00000082438|ENST00000652658|COBLL1;nc|ENSG00000082438|Q53SF7-2|COBLL1;nc|ENSG00000082438|Q53SF7-3|COBLL1 10.799506525563784 0.5443532743200366 3 {I|L}PEKTV 6 3 42.757 0.0 0.0 4.1127 0.0 0.0 0.0 369.2265108697876 369.2265108697876 41.78782106365384 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + {I|L}PEKTV 4.1127 + + 25 + 1 1.657 87975.8 1.0 2760 5170 7923 HBL1_DMSO_200M_050219_1,7932 HBL1_DMSO_200M_050219_1,7932,IPEKTVRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7933 41.878 261.0 401480.0 25 0 51362.0 + 43564 YAALCFLACLT 11 92 396.8655988053006 1187.5749670161017 3 396.8659850955009 MULTI CID FTMS 0 0 0 7923 240439.53125 1.0 0 0.0 10 Unmodified _YAALCFLACLT_ REV__ENSG00000163217|ENST00000295379|BMP10 5.731851221503515 0.8481046878870278 3 YYM 3 -1 43.188 0.0 0.0 3.6366 0.0 0.0 0.0 727.385909255237 727.385909255237 37.70303756120384 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 YYM 3.6366 - 26 + 1 1.657 88025.2 1.0 2761 5170 7923 HBL1_DMSO_200M_050219_1,7933 HBL1_DMSO_200M_050219_1,7933,YAALCFLACLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7934 41.891 749.0 343600.0 25 0 28119.0 + 6495 EAIQRTPKI 9 202 528.3141881340475 1054.613823334895 2 528.3146850466728 MULTI CID FTMS 0 0 0 7923 223734.59375 0.8036684603402154 -1 0.0848159790039062 11 Unmodified _EAIQRTPKI_ B2M|p.Y46Cfs*10|1|0.63|ENSG00000166710|chr15:44715491-44715492|TA/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF 93.93812099017352 0.0133843357737428 3 EA{I|L}QRTPK{I|L} 9 0 + 82.978 0.0 0.0 7.8681 7.8681 92.924 0.0 0.0 0.0 19.077899313226823 9.539477126805338 9.539477126805338 9.208187539523747 0 1.8979400086720373 1.5228787452803376 0.4247425010840047 0.3252574989159953 + + EA{I|L}QRTPK{I|L};EA{I|L}[AG]RTPK{I|L};EA{I|L}QRTP{I|L}K;EA{I|L}QRT{I|L}PK;EA{I|L}QRT{I|L}KP;EA{I|L}[AG]RTP{I|L}K;{I|L}AEQRTPK{I|L};EA{I|L}[AG]RT{I|L}PK;EA{I|L}[AG]RT{I|L}KP;{I|L}AE[AG]RTPK{I|L} 7.8681;6.995;6.9635;6.7139;6.6654;6.0904;6.0591;5.8408;5.7922;5.186 +;-;-;-;-;-;-;-;-;- + 5878 + 1 1.657 197678.1 1.0 2762 5170 7923 HBL1_DMSO_200M_050219_1,7934 HBL1_DMSO_200M_050219_1,7934,EAIQRTPKI True True EAIQRTPKI 41.890508 528.314685046673 3487914.75 7923.0 ENST00000559720.5_1_15:45003705-45007919:+|nuORF;;ENSG00000166710|ENST00000648006|B2M;;B2M|p.Y46Cfs*10|1|0.63|ENSG00000166710|chr15:44715491-44715492|TA/-|frameshift_variant 3.5886866648991904 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7935 41.894 191.0 400620.0 25 0 40397.0 + 10349 FSHKPSPIS 9 121 500.26606371872646 0 500.2653076052666 PEAK CID FTMS 0 0 0 7923 275702.375 1.0 0 0.0 12 Unmodified _FSHKPSPIS_ REV__ENST00000508784.5_1_4:146681933-146682710:-|nuORF 6.723162845929126 0.3444685223463734 3 Q{I|L} 2 -1 7.3206 0.0 0.0 0.73315 0.0 0.0 572.2939549747592 182.0574892633422 754.3514442381014 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 Q{I|L} 0.73315 - 46 + 1 1.657 61604.6 1.0 2763 5170 7923 HBL1_DMSO_200M_050219_1,7935 HBL1_DMSO_200M_050219_1,7935,FSHKPSPIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7936 41.908 774.0 187990.0 25 0 8470.6 + 29182 QGDDTKRCLTN 11 158 625.7910325044653 1249.5675120757303 2 625.7911865115166 MULTI CID FTMS 0 0 0 7923 191638.34375 1.0 0 0.0 13 Unmodified _QGDDTKRCLTN_ REV__ENSG00000115760|ENST00000421745|BIRC6 53.31671820480216 0.0992620867501809 3 {[QG]|[NA]}DTC(Carbamidomethyl (C))[WR]{I|L}QS 10 -1 + 60.846 0.0 0.0 4.8694 4.8694 75.906 0.0 0.0 0.0 2.473231929912565 2.473231929912565 2.473231929912565 2.455126678141504 0 1.5114393726401687 2.0 0.7887254899964358 1.3441876774005248 {[QG]|[NA]}DTC(Carbamidomethyl (C))[WR]{I|L}QS;{[QG]|[NA]}DTC(Carbamidomethyl (C)){I|L}[QT]{I|L}QS;{[QG]|[NA]}DVD{[QG]|[NA]}G{M(Oxidation (M))|F}{I|L}SQ;{[QG]|[NA]}DV{[QG]|[NA]}DG{M(Oxidation (M))|F}{I|L}SQ;{[QG]|[NA]}DTC(Carbamidomethyl (C)){I|L}[WR]QS;{[QG]|[NA]}DV{[WN]|[YH]}G{M(Oxidation (M))|F}{I|L}SQ;{[QG]|[NA]}DT[CG][WR]{I|L}QS;{[QG]|[NA]}DV[EP]M{M(Oxidation (M))|F}{I|L}SQ;{[QG]|[NA]}DTC(Carbamidomethyl (C))[WR]{I|L}SQ;{[QG]|[NA]}DT[CG]{I|L}[QT]{I|L}QS 4.8694;4.6729;4.6714;4.5714;4.5468;4.5241;4.1359;4.1081;4.0506;3.9423 -;-;-;-;-;-;-;-;-;- 3037 + 1 1.657 116707.7 1.0 2764 5170 7923 HBL1_DMSO_200M_050219_1,7936 HBL1_DMSO_200M_050219_1,7936,QGDDTKRCLTN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7937 41.911 175.0 256280.0 25 0 13374.0 + -1 SFSSFMFQP 9 100 547.2357405545076 1092.4569281758152 2 547.7357665896416 MULTI CID FTMS 0 0 0 7923 160266.5 1.0 0 0.0 14 Oxidation (M) _SFSSFM(Oxidation (M))FQP_ REV__ENSG00000197410|ENST00000357232|DCHS2 3.944395688203298 0.7769873103969335 3 P 1 -1 15.506 0.0 0.0 1.4194 0.0 0.0 977.3931902381184 0.0 977.3931902381184 0.0 5.021934810768762 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P 1.4194 + + 39 + 1 1.657 42123.2 1.0 2765 5170 7923 HBL1_DMSO_200M_050219_1,7937 HBL1_DMSO_200M_050219_1,7937,SFSSFMFQP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7938 41.919 359.0 198320.0 25 0 62894.0 -1 LCTSRWVCF 9 101 424.1959845141347 0 424.2152587771416 PEAK CID FTMS 0 0 0 7923 69704.859375 1.0 0 0.0 15 Acetyl (Protein N-term),2 Carbamidomethyl (C) _(Acetyl (Protein N-term))LC(Carbamidomethyl (C))TSRWVC(Carbamidomethyl (C))F_ ENST00000264193.2_1_3:98309863-98309983:-|nuORF 2.9952420565917617 0.3444685223463734 3 A 1 -1 3.0989 0.0 0.0 0.36614 0.0 0.0 676.2351411700679 96.08243738345936 772.3175785535273 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.36614 - 4 + 1 1.657 62394.1 1.0 2766 5170 7923 HBL1_DMSO_200M_050219_1,7938 HBL1_DMSO_200M_050219_1,7938,LCTSRWVCF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7939 41.932 800.0 102770.0 25 0 7417.2 -1 0 58 1115.1629266664377 5570.7782509991885 5 1115.971362292767 MULTI CID FTMS 0 0 0 7923 134180.75 0.178160727815301 -9 0.39141845703125 16 3 PQ 2 -1 15.969 0.0 0.0 0.28666 0.0 0.0 1596.7642654311614 3745.879812077753 5342.644077508915 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 PQ 0.28666 - 14 + 1 1.657 60071.8 0.4600000083446502 2767 5170 7923 HBL1_DMSO_200M_050219_1,7939 HBL1_DMSO_200M_050219_1,7939, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7940 41.938 280.0 268780.0 25 0 20055.0 + + 19759 VAKAIATTV 9 107 437.262611889174 872.510670845148 2 437.2741882205009 MULTI CID FTMS 0 0 0 7923 83363.7265625 0.6963399230059223 -2 0.1769828796386718 17 Unmodified _LGQLAFKP_ ENSG00000100372|ENST00000435456|SLC25A17;ENST00000447566.5_1_22:41166840-41215302:-|nuORF 23.1484247019978 0.5573009939494978 3 {M(Oxidation (M))|F}PK 3 -1 20.175 0.0 0.0 2.3123 0.0 0.0 482.28372489963857 0.0 482.28372489963857 0.0 1.4190150233918857 0.0 0.0 0 0.805462187404089 0.0 0.0 0.3703715150305281 {M(Oxidation (M))|F}PK 2.3123 - 358 + 1 1.657 61459.2 1.0 2768 5170 7923 HBL1_DMSO_200M_050219_1,7940 HBL1_DMSO_200M_050219_1,7940,LGQLAFKP False False VAKAIATTV 41.937643 437.274188220501 406386.34375 7923.0 ENSG00000100372|ENST00000435456|SLC25A17;;ENST00000447566.5_1_22:41166840-41215302:-|nuORF 2.1929539839426675 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7941 41.951 800.0 302330.0 25 0 29051.0 + 39106 TWPSPRTTPH 10 148 590.2990392020348 1178.5835254708695 2 590.2983886599541 MULTI CID FTMS 0 0 0 7923 113311.1953125 1.0 0 0.0 18 Unmodified _TWPSPRTTPH_ ENST00000294189.10_2_3:52028123-52029875:-|nuORF 27.628801355627647 0.3479284626772844 3 {[WT]|[RM]}PS 4 6 20.688 0.0 0.0 1.7553 0.0 0.0 0.0 704.3494978424851 704.3494978424851 8.724862742317468 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 + {[WT]|[RM]}PS 1.7553 + + 75 + 1 1.657 180495.5 0.6899999976158142 2769 5170 7923 HBL1_DMSO_200M_050219_1,7941 HBL1_DMSO_200M_050219_1,7941,TWPSPRTTPH False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7942 41.966 800.0 196680.0 25 0 18732.0 + -1 AVLNEQVKEA 10 171 550.3010826693684 1098.587612405537 2 550.8008911013603 MULTI CID FTMS 0 0 0 7923 81234.46875 1.0 0 0.0 19 Carbamidomethyl (C) _LGINC(Carbamidomethyl (C))GLGAKP_ nc|ENSG00000132780|P49321-2|NASP;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;ENSG00000132780|ENST00000350030|NASP;nc|ENSG00000132780|P49321-4|NASP;nc|ENSG00000132780|P49321-3|NASP;ENST00000529239.1_1_8:61850552-61850903:-|nuORF 13.90604991867851 0.7458848613461305 3 DKK{I|L}{M(Oxidation (M))|F}{[QS]|[NT]}AY 9 -1 + 36.838 0.0 0.0 3.3532 3.3532 70.886 0.0 0.0 0.0 2.1500932508605146 1.9210842305441105 1.9210842305441105 1.9210842305441105 0 0.1139829889124311 0.0 0.0 0.6549471895720985 DKK{I|L}{M(Oxidation (M))|F}{[QS]|[NT]}AY;DKK{I|L}[HM]KEA;{[VA]|[{I|L}G]}GEN[SG]{I|L}K[QP];{[VA]|[{I|L}G]}GQD[SG]{I|L}K[QP];DKK{I|L}[HM][{I|L}T]N;DKK{I|L}{M(Oxidation (M))|F}[HT]PN;{[VA]|[{I|L}G]}GEQ{[QD]|[EN]|[WG]|[KD]|[RS]}K[QP];DKK{[QD]|[EN]|[WG]|[KD]|[RS]}[R{M(Oxidation (M))|F}]Y;{[VA]|[{I|L}G]}GQE{[QD]|[EN]|[WG]|[KD]|[RS]}K[QP];{[VA]|[{I|L}G]}GEQV[SG]K[QP] 3.3532;3.1784;3.1575;3.0165;2.7902;2.6926;2.6727;2.6664;2.5317;2.502 -;-;-;-;-;-;-;-;-;- 3180 + 1 1.657 123339.4 0.6800000071525574 2770 5170 7923 HBL1_DMSO_200M_050219_1,7942 HBL1_DMSO_200M_050219_1,7942,LGINCGLGAKP False False AVLNEQVKEA 41.966482 550.80089110136 474071.65625 7923.0 nc|ENSG00000132780|P49321-2|NASP;;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;;ENSG00000132780|ENST00000350030|NASP;;nc|ENSG00000132780|P49321-4|NASP;;nc|ENSG00000132780|P49321-3|NASP;;ENST00000529239.1_1_8:61850552-61850903:-|nuORF 4.331015586853027 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7943 41.98 800.0 67669.0 25 0 9686.0 + 36916 TESSTKPLEEL 11 101 617.3141062305234 0 617.7490722537041 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _TESSTKPLEEL_ REV__ENSG00000038219|ENST00000040738|BOD1L1 5.731851221503515 0.47618401536486 3 {M(Oxidation (M))|F} 1 -1 6.7217 0.0 0.0 0.54532 0.0 0.0 616.326807576478 466.2388094537719 1082.56561703025 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.54532 - 26 + 1 1.657 48405.8 0.6200000047683716 2771 5170 7923 HBL1_DMSO_200M_050219_1,7943 HBL1_DMSO_200M_050219_1,7943,TESSTKPLEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7945 41.985 22.0 2026400.0 25 0 181110.0 + 32664 SDAYQTREI 9 70 541.759191800432 1081.5038306676638 2 541.7595092654228 MULTI CID FTMS 0 0 0 7944 2075379.375 0.3835408402795437 1 -0.0947761535644531 1 Unmodified _SDAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 40.23920728925047 0.0741434193262949 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 8 8 55.187 0.0 0.0 5.1028 0.0 0.0 0.0 199.03504929312308 199.03504929312308 44.47366674806666 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.3807196863200844 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 5.1028 - 219 1 1.657 42904.6 1.0 2772 5171 7944 HBL1_DMSO_200M_050219_1,7945 HBL1_DMSO_200M_050219_1,7945,SDAYQTREI True True SDAYQTREI 41.984636 541.759509265423 86412696.0 7944.0 ENSG00000127914|ENST00000356239|AKAP9;;nc|ENSG00000127914|Q99996-3|AKAP9;;nc|ENSG00000127914|Q99996-6|AKAP9 6.502792517344157 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7946 41.988 174.0 435050.0 25 0 34990.0 + 11060 GDYTADKLRP 10 107 568.2923331046136 1134.570113276027 2 568.2927123904228 MULTI CID FTMS 0 0 0 7944 275401.75 0.2579041464687713 1 -0.0947761535644531 2 Unmodified _GDYTADKLRP_ REV__ENSG00000003393|ENST00000264276|ALS2;REV__ENST00000482891.5_1_2:202587756-202633608:-|nuORF 10.073929032068715 0.6785112666868882 3 {M(Oxidation (M))|F}STNG{I|L}RP 8 -1 34.846 0.0 0.0 3.0713 0.0 0.0 244.1401057062497 0.0 244.1401057062497 0.0 21.35065062872272 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}STNG{I|L}RP 3.0713 - 335 + 1 1.657 63885.4 1.0 2773 5171 7944 HBL1_DMSO_200M_050219_1,7946 HBL1_DMSO_200M_050219_1,7946,GDYTADKLRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7947 41.989 57.0 1070400.0 25 0 243870.0 + 35623 SVAGSVERV 9 68 452.24810738824686 0 452.2484924197197 PEAK CID FTMS 0 0 0 7944 963594.625 1.0 0 0.0 3 Unmodified _SVAGSVERV_ ENSG00000130713|ENST00000372358|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;ENST00000463488.1_1_9:133569202-133574940:+|nuORF;ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2 22.65808497894818 0.176975000361068 3 AGSVE 5 4 28.047 0.0 0.0 3.1078 0.0 0.0 186.0987379276101 270.1587008111938 456.2574387388039 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + AGSVE 3.1078 + + 134 + 1 1.657 52792.7 1.0 2774 5171 7944 HBL1_DMSO_200M_050219_1,7947 HBL1_DMSO_200M_050219_1,7947,SVAGSVERV False True SVAGSVERV 41.989473 452.24849241972 6148998.0 7944.0 ENST00000491115.6_1_9:133569178-133574746:+|nuORF;;nc|ENSG00000130713|Q13868-3|EXOSC2;;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;;nc|ENSG00000130713|Q13868-2|EXOSC2;;ENSG00000130713|ENST00000372358|EXOSC2;;ENST00000463488.1_1_9:133569202-133574940:+|nuORF 3.3477328618367515 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7948 41.991 61.0 1045500.0 25 0 131150.0 + 38442 TRSTCASPVQ 10 77 525.2547443244074 1048.4949357156147 2 525.2543212771416 MULTI CID FTMS 0 0 0 7944 771018.75 0.6731180979245157 -1 0.1325340270996093 4 Unmodified _TRSTCASPVQ_ REV__ENST00000602825.5_1_1:231664421-231690428:+|nuORF 17.11289562659939 0.5604042439455784 3 ADG{M(Oxidation (M))|F}{I|L}Q 6 -1 41.86 0.0 0.0 3.9924 0.0 0.0 399.1866627423844 0.0 399.1866627423844 0.0 26.787887749990343 0.0 0.0 0 1.0 0.0 0.0 0.0 ADG{M(Oxidation (M))|F}{I|L}Q 3.9924 - 271 1 1.657 57509.7 1.0 2775 5171 7944 HBL1_DMSO_200M_050219_1,7948 HBL1_DMSO_200M_050219_1,7948,TRSTCASPVQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7949 41.992 54.0 1400700.0 25 0 187220.0 + 9760 FMQEKARQL 9 95 384.20554339240414 1149.5948007774125 3 384.2052795290947 MULTI CID FTMS 0 0 0 7944 724715.5625 1.0 0 0.0 5 Unmodified _FMQEKARQL_ ENSG00000101057|ENST00000217026|MYBL2;nc|ENSG00000101057|P10244-2|MYBL2 13.042465956692816 0.4836390050082244 3 {M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EK[KS]G[VP] 10 5 + 32.676 0.0 0.0 2.8424 2.8424 71.563 0.0 0.0 0.0 0.0 0.0 0.0 3.0102999566398125 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EK[KS]G[VP];{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))D]K[KS]G[VP] 2.8424;2.5805 -;- 103 + 1 1.657 65523.7 1.0 2776 5171 7944 HBL1_DMSO_200M_050219_1,7949 HBL1_DMSO_200M_050219_1,7949,FMQEKARQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7950 41.995 105.0 1001200.0 25 0 140030.0 19146 LEAIQRTPK 9 112 352.5451255580798 1054.6135472744395 3 352.5450012087822 MULTI CID FTMS 0 0 0 7944 609191.1875 0.8647664927236999 1 -0.0947761535644531 6 Unmodified _LEAIQRTPK_ B2M|p.Y46Cfs*10|1|0.63|ENSG00000166710|chr15:44715491-44715492|TA/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF 19.256988751693697 0.3154191944385105 3 {[CP]|[EA]}{I|L}{I|L}Q 5 6 20.445 0.0 0.0 1.9387 0.0 0.0 0.0 497.2850741022094 497.2850741022094 6.9504625720438895 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {[CP]|[EA]}{I|L}{I|L}Q 1.9387 - 159 + 1 1.657 91826.2 1.0 2777 5171 7944 HBL1_DMSO_200M_050219_1,7950 HBL1_DMSO_200M_050219_1,7950,LEAIQRTPK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7951 41.997 114.0 726340.0 25 0 144610.0 + 30254 QYDSNEKF 8 102 515.7273140154333 1029.4400750976663 2 515.7275878787041 MULTI CID FTMS 0 0 0 7944 580218.4375 0.3580112419485509 -1 0.1325340270996093 7 Unmodified _QYDSNEKF_ REV__CON__Q1A7A4 19.438996006549623 0.6237395211498085 3 [NS]YNE{I|L}QY 8 -1 + 52.278 0.0 0.0 5.0783 5.0783 83.3 0.0 0.0 0.0 8.495302317543647 7.848655909233798 7.848655909233798 8.495302317543647 0 0.0858955865873612 0.0 0.9247425010840048 1.579689690656103 [NS]YNE{I|L}QY;[YN]SNE{I|L}QY;[NS]YGGE{I|L}QY;[YN]SGGE{I|L}QY;[TP]Q{I|L}ED{[QC]|[C(Carbamidomethyl (C))A]}P;[TP][AG]{I|L}ED{[QC]|[C(Carbamidomethyl (C))A]}P;[YQ]{[QS]|[NT]}[DV]QY;[TP]{[QN]|[E{I|L}]|[KN]}QD{[QC]|[C(Carbamidomethyl (C))A]}P;[NS]YAA[DV]QY;[TP]Q{[MG]|[TS]}[HS]{[WS]|[C(Carbamidomethyl (C)){I|L}]} 5.0783;4.2531;4.1786;3.3534;2.609;1.7146;1.698;1.6649;1.1447;0.73277 -;-;-;-;-;-;-;-;-;- 355 1 1.657 70120.0 1.0 2778 5171 7944 HBL1_DMSO_200M_050219_1,7951 HBL1_DMSO_200M_050219_1,7951,QYDSNEKF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7952 41.999 100.0 805880.0 25 0 111710.0 + + -1 TYAPSGRSL 9 87 476.2515189082321 0 476.2487670779228 PEAK CID FTMS 0 0 0 7944 560215.625 1.0 0 0.0 8 Oxidation (M) _FNQLLAM(Oxidation (M))V_ ENSG00000163874|ENST00000373087|ZC3H12A 24.67388899826682 0.3296343502680589 3 AP 2 -1 17.078 0.0 0.0 1.7968 0.0 0.0 264.1164092191636 515.2597114257723 779.3761206449358 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 AP 1.7968 - 104 + 1 1.657 65353.6 1.0 2779 5171 7944 HBL1_DMSO_200M_050219_1,7952 HBL1_DMSO_200M_050219_1,7952,FNQLLAMV False False TYAPSGRSL 41.999142 476.248767077923 3371941.75 7944.0 ENSG00000163874|ENST00000373087|ZC3H12A 4.158087650934855 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7953 42.002 112.0 541540.0 25 0 85531.0 + -1 YQCSHPELMY 10 77 672.2739518177306 1342.533350702261 2 672.2742797732353 MULTI CID FTMS 0 0 0 7944 493702.96875 0.544339879885132 1 -0.0947761535644531 9 Carbamidomethyl (C),Oxidation (M) _YQC(Carbamidomethyl (C))SHPELM(Oxidation (M))Y_ REV__ENSG00000068912|ENST00000185150|ERLEC1;REV__nc|ENSG00000068912|Q96DZ1-2|ERLEC1;REV__nc|ENSG00000068912|Q96DZ1-3|ERLEC1 7.289230182591677 0.6929195370588109 3 DY 2 -1 14.335 0.0 0.0 1.0677 0.0 0.0 1046.4321982137828 0.0 1046.4321982137828 0.0 5.382293619978718 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 DY 1.0677 - 69 + 1 1.657 48132.5 1.0 2780 5171 7944 HBL1_DMSO_200M_050219_1,7953 HBL1_DMSO_200M_050219_1,7953,YQCSHPELMY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7954 42.004 115.0 556680.0 25 0 54932.0 + 6679 EAYTHAQI 8 100 466.7271752657469 931.4397975982936 2 466.7269775271416 MULTI CID FTMS 0 0 0 7944 457470.375 1.0 0 0.0 10 Unmodified _EAYTHAQI_ ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR 36.04419817259434 0.3004715606373109 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HT]QAE{I|L} 8 3 + 21.63 0.0 0.0 2.3222 2.3222 67.221 0.0 0.0 0.0 0.8040747723590158 3.125145978905053 0.8040747723590158 0.8040747723590158 0 0.218765315847925 1.3979400086720375 0.0 0.8807196863200843 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HT]QAE{I|L};[TA]HYQAE{I|L};[HA]TYQAE{I|L};[HT]YAQAE{I|L};[TA]HQYAE{I|L};[TA]NWQAE{I|L};[HT]AYQAE{I|L};[HA]TQYAE{I|L};[TA]NA{[QD]|[EN]|[WG]|[KD]|[RS]}AE{I|L};[HT]AQYAE{I|L} 2.3222;2.2359;2.103;2.103;1.9618;1.9532;1.914;1.829;1.7093;1.6399 -;-;-;-;-;-;-;-;-;- 560 1 1.657 54763.0 1.0 2781 5171 7944 HBL1_DMSO_200M_050219_1,7954 HBL1_DMSO_200M_050219_1,7954,EAYTHAQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7955 42.006 88.0 553240.0 25 0 34681.0 + 7466 DADSASQRLV 10 89 531.2674682531832 0 531.2654296755791 PEAK CID FTMS 0 0 0 7944 379117.3125 0.7829193882572876 -5 0.41363525390625 11 Unmodified _EGQKLQEMV_ ENSG00000108510|ENST00000397786|MED13 14.838274106304384 0.2567717476666951 3 DSAK 4 8 17.779 0.0 0.0 1.6765 0.0 0.0 186.07117810617257 470.2360018365844 656.307179942757 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 DSAK 1.6765 - 48 + 1 1.657 41737.7 1.0 2782 5171 7944 HBL1_DMSO_200M_050219_1,7955 HBL1_DMSO_200M_050219_1,7955,EGQKLQEMV False False DADSASQRLV 42.005863 531.265429675579 3273202.75 7944.0 ENSG00000108510|ENST00000397786|MED13 3.134582300980886 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7956 42.009 143.0 474510.0 25 0 47454.0 + 8304 EQVSKMASV 9 104 489.74965784600585 977.4847627588116 2 489.7494994997978 MULTI CID FTMS 0 0 0 7944 334902.25 0.4031478788307405 -1 0.1325340270996093 12 Unmodified _EQVSKMASV_ ENSG00000047410|ENST00000367478|TPR 41.8396318013385 0.0653578398400075 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VS[Q{I|L}]{M(Oxidation (M))|F}Q 8 5 + 24.078 0.0 0.0 2.4633 2.4633 78.876 0.0 0.0 0.0 0.4592524693043032 1.3582807903842564 0.4592524693043032 9.56653386214313 0 0.4247425010840047 0.0 0.4247425010840047 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VS[Q{I|L}]{M(Oxidation (M))|F}Q;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PA]KM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PA][Q{I|L}][RH];[AG]E[HK][SG][RH];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HK][SG][RH] 2.4633;1.4846;0.16923;0.11876;0.01974 -;-;-;-;- 404 + 1 1.657 59026.9 1.0 2783 5171 7944 HBL1_DMSO_200M_050219_1,7956 HBL1_DMSO_200M_050219_1,7956,EQVSKMASV True True EQVSKMASV 42.008727 489.749499499798 4618436.0 7944.0 ENSG00000047410|ENST00000367478|TPR 6.342545509338379 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7957 42.014 303.0 316720.0 25 0 15865.0 + 9761 FMQEKARQL 9 101 575.804705410431 1149.594857887662 2 575.8054077029228 MULTI CID FTMS 0 0 0 7944 312026.40625 1.0 0 0.0 13 Unmodified _FMQEKARQL_ ENSG00000101057|ENST00000217026|MYBL2;nc|ENSG00000101057|P10244-2|MYBL2 51.629811660486645 0.0367964933207742 3 AKEQME 6 8 62.81 0.0 0.0 5.4637 0.0 0.0 415.2544422834 0.0 415.2544422834 0.0 52.3526785162008 0.0 0.0 0 0.7059771852360797 0.0 0.7614393726401688 0.8494850021680094 AKEQME 5.4637 - 106 1 1.657 80325.9 1.0 2784 5171 7944 HBL1_DMSO_200M_050219_1,7957 HBL1_DMSO_200M_050219_1,7957,FMQEKARQL True True FMQEKARQL 42.014269 575.805407702923 5853244.125 7944.0 nc|ENSG00000101057|P10244-2|MYBL2;;ENSG00000101057|ENST00000217026|MYBL2 4.80912454922994 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7958 42.028 783.0 272630.0 25 0 25279.0 6694 ECKECRKCFYQ 11 140 775.8286409832901 1549.6427290333802 2 775.8298828005791 MULTI CID FTMS 0 0 0 7944 252500.5 0.478040982466935 -1 0.1325340270996093 14 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 41.95555342248728 0.1822715950200113 3 [QA]HDEAGAQDA{M(Oxidation (M))|F}YQ 14 10 + 144.01 0.0 0.0 9.2934 9.2934 83.831 0.0 0.0 0.0 0.6954393554186709 9.050244867691418 0.6954393554186709 0.6954393554186709 0 2.311604235276773 0.0 1.9001334897489133 2.504432191740108 [QA]HDEAGAQDA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}YQ;[QA]DHEAGAQDA{M(Oxidation (M))|F}YQ;[HD]EAQAGAQDA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}GAHEAGAQDA{M(Oxidation (M))|F}YQ;[QA]HDEAGA[AG]DA{M(Oxidation (M))|F}YQ;[QA]HDEAQQDA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}QHEAGA[AG]DA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}YQ;[AG]AHDEAGAQDA{M(Oxidation (M))|F}YQ 9.2934;9.2485;9.0661;8.8536;8.8468;8.7093;8.6768;8.6645;8.6319;8.5924 -;-;-;-;-;-;-;-;-;- 94360 1 1.657 149606.2 1.0 2785 5171 7944 HBL1_DMSO_200M_050219_1,7958 HBL1_DMSO_200M_050219_1,7958,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7959 42.033 260.0 330370.0 25 0 39696.0 + -1 RMLPHAPGV 9 100 497.2686269517175 992.5227009702352 2 497.2692748904228 MULTI CID FTMS 0 0 0 7944 229536.953125 0.7922865566172567 -1 0.1325340270996093 15 Oxidation (M) _RM(Oxidation (M))LPHAPGV_ ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;ENSG00000116478|ENST00000373548|HDAC1 16.942295170755138 0.3780752226737986 3 QAPR 4 -1 23.984 0.0 0.0 2.4165 0.0 0.0 522.2657948224625 0.0 522.2657948224625 0.0 5.2473594786049205 0.0 0.0 0 1.1677353201839438 0.0 0.0 0.0 QAPR 2.4165 - 240 1 1.657 70286.4 1.0 2786 5171 7944 HBL1_DMSO_200M_050219_1,7959 HBL1_DMSO_200M_050219_1,7959,RMLPHAPGV False False RMLPHAPGV 42.032648 497.269274890423 3149515.75 7944.0 ENSG00000196591|ENST00000519065|HDAC2;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 6.3239467938741045 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7960 42.046 800.0 543090.0 25 0 78215.0 -1 0 185 422.1227600193153 842.2309671054306 2 422.1227905154228 MULTI CID FTMS 0 0 0 7944 227119.671875 0.1156997608645706 -4 0.3865509033203125 16 3 V 1 -1 10.485 0.0 0.0 1.2449 0.0 0.0 725.1516652028901 0.0 725.1516652028901 0.0 -4.085142482848294 -4.085142482848294 0.0 0 0.0 0.0 0.0 0.0 V 1.2449 - 41 + 1 1.657 329566.4 0.9100000262260436 2787 5171 7944 HBL1_DMSO_200M_050219_1,7960 HBL1_DMSO_200M_050219_1,7960, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7961 42.051 268.0 351890.0 25 0 52342.0 + 17928 KQVLDSQPV 9 132 507.2841757811144 1012.5537986290288 2 507.2847778201103 MULTI CID FTMS 0 0 0 7944 225893.109375 0.6430465490837455 -1 0.1325340270996093 17 Unmodified _KQVLDSQPV_ ENST00000405995.5_1_9:134305515-134305602:+|nuORF 41.8396318013385 0.0653578398400075 3 [AG]KV{I|L}DSQ[VP] 10 3 + 40.003 0.0 0.0 3.9507 3.9507 76.115 0.0 0.0 0.0 4.146518864155119 24.20055737786221 4.146518864155119 4.490925311194182 0 0.5 1.0969100130080565 0.6549471895720984 0.6549471895720985 [AG]KV{I|L}DSQ[VP];[KQ]V{I|L}DSQ[VP];[AG]KV{I|L}DS[AG][VP];[AG]SD{I|L}VKQ[VP];[KQ]V{I|L}DS[AG][VP];[{I|L}T]QKV[DN]PV;{[QS]|[NT]}D{I|L}VKQ[VP];[{I|L}T][RH]YQ[VP];[{I|L}T]QY[RH]PV;[{I|L}T][DN]VKQ[VP] 3.9507;3.5071;3.0456;2.5993;2.5977;2.2061;2.1558;2.1222;2.0041;1.9791 -;+;-;-;-;-;-;-;-;- + 533 1 1.657 80348.6 1.0 2788 5171 7944 HBL1_DMSO_200M_050219_1,7961 HBL1_DMSO_200M_050219_1,7961,KQVLDSQPV True True KQVLDSQPV 42.051404 507.28477782011 2783554.75 7944.0 ENST00000405995.5_1_9:134305515-134305602:+|nuORF 5.398895740509033 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7962 42.058 291.0 591240.0 25 0 45995.0 21403 LPGGSLWLPGP 11 139 547.3062212689401 1092.5978896046802 2 547.3075439333916 MULTI CID FTMS 0 0 0 7944 191869.46875 0.1246367464892632 -3 0.3095169067382812 18 Unmodified _LPGGSLWLPGP_ ENST00000419336.6_1_7:100491185-100491476:-|nuORF 29.081581746732265 0.4093582134107448 3 {I|L}PWWVSQ 7 8 47.114 0.0 0.0 4.3121 0.0 0.0 0.0 193.0987337701781 193.0987337701781 16.310311451526278 0.0 0.0 0.0 0 0.5 1.0 0.566901560044258 0.5994850021680094 {I|L}PWWVSQ 4.3121 - 1669 + 1 1.657 130764.5 1.0 2789 5171 7944 HBL1_DMSO_200M_050219_1,7962 HBL1_DMSO_200M_050219_1,7962,LPGGSLWLPGP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7963 42.061 172.0 502850.0 25 0 69137.0 + + 27176 GVHPPAPGV 9 110 415.7291101614208 829.4436673896416 2 415.7297241091728 MULTI CID FTMS 0 0 0 7944 187826.0625 0.5599388490314503 -1 0.1325340270996093 19 Unmodified _PGAPVHPGV_ ENSG00000104897|ENST00000221494|SF3A2 20.871210003555333 0.2717241269066626 3 APR 3 -1 29.397 0.0 0.0 3.5442 0.0 0.0 487.2530689923844 0.0 487.2530689923844 0.0 15.418089237648667 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 APR 3.5442 - 147 1 1.657 74231.7 1.0 2790 5171 7944 HBL1_DMSO_200M_050219_1,7963 HBL1_DMSO_200M_050219_1,7963,PGAPVHPGV False False GVHPPAPGV 42.061273 415.729724109173 2288985.25 7944.0 ENSG00000104897|ENST00000221494|SF3A2 5.342334747314453 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7964 42.075 800.0 190630.0 25 0 19984.0 + 3613 DAAYSRWV 8 182 484.2354721750072 0 484.2347900271416 PEAK CID FTMS 0 0 0 7944 155538.46875 0.5379360814175 1 -0.0947761535644531 20 Unmodified _DAAYSRWV_ REV__ENSG00000185760|ENST00000370398|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-2|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-3|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-4|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-5|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-6|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-7|KCNQ5 9.347437153973935 0.5488964601725408 3 S 1 -1 5.5065 0.0 0.0 0.56976 0.0 0.0 730.3733968873207 146.02849756412346 876.4018944514442 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 S 0.56976 + + 60 + 1 1.657 116865.8 0.7300000190734863 2791 5171 7944 HBL1_DMSO_200M_050219_1,7964 HBL1_DMSO_200M_050219_1,7964,DAAYSRWV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7966 42.079 3.6 13654000.0 25 0 1853200.0 + 5779 DPPPGSHVI 9 84 459.7369120917008 917.4592712502016 2 459.7379333376884 MULTI CID FTMS 0 0 0 7965 14540997.0 0.5796206670745259 2 -0.1759452819824218 1 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 34.10243960390752 0.1078313939113124 3 [DP]P 3 6 37.958 0.0 0.0 4.1372 0.0 0.0 0.0 605.3058975459059 605.3058975459059 26.988474775526186 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 + [DP]P 4.1372 + + 166 + 1 1.66 42779.8 1.0 2792 5172 7965 HBL1_DMSO_200M_050219_1,7966 HBL1_DMSO_200M_050219_1,7966,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7967 42.082 109.0 569110.0 25 0 36556.0 + 6507 EAPPPPRVV 9 95 481.7790405561032 961.5435281790064 2 481.7791015505791 MULTI CID FTMS 0 0 0 7965 272373.1875 0.0772117322076621 3 -0.2597084045410156 2 Unmodified _EAKGRFRV_ ENSG00000204116|ENST00000373502|CHIC1;nc|ENSG00000204116|Q5VXU3-2|CHIC1 14.581692164780916 0.6954967302934248 3 [NS]PPPV 6 7 17.88 0.0 0.0 1.8595 0.0 0.0 0.0 367.21033320802434 367.21033320802434 6.286531417686096 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NS]PPPV 1.8595 - 78 + 1 1.66 54215.4 1.0 2793 5172 7965 HBL1_DMSO_200M_050219_1,7967 HBL1_DMSO_200M_050219_1,7967,EAKGRFRV False False EAPPPPRVV 42.081719 481.779101550579 22915538.0 7965.0 ENSG00000204116|ENST00000373502|CHIC1;;nc|ENSG00000204116|Q5VXU3-2|CHIC1 5.351837793986003 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7968 42.085 155.0 483690.0 25 0 63048.0 + 22507 LPPPIRTG 8 77 425.7608368711503 849.5071208091006 2 425.7607910037041 MULTI CID FTMS 0 0 0 7965 413049.0 0.2417299077987345 -5 0.4813270568847656 3 Unmodified _LPVTAPRP_ nc|ENSG00000010219|Q9NR20-3|DYRK4;ENSG00000010219|ENST00000543431|DYRK4;nc|ENSG00000010219|Q9NR20-4|DYRK4 26.88365393820708 0.4786498634179528 3 {I|L}PPP[W{I|L}]K 7 6 + 53.689 0.0 0.0 6.32 6.32 87.498 0.0 0.0 0.0 42.579788405306616 0.0291567739867559 0.0291567739867559 8.538719643217618 0 0.4247425010840047 2.0 0.0 0.4247425010840047 {I|L}PPP[W{I|L}]K;{I|L}P[{I|L}T][PG][RP];{I|L}[YK][W{I|L}]K 6.32;5.3149;0.36888 -;-;- 144 + 1 1.66 65731.5 1.0 2794 5172 7965 HBL1_DMSO_200M_050219_1,7968 HBL1_DMSO_200M_050219_1,7968,LPVTAPRP False False LPPPIRTG 42.084775 425.760791003704 27621386.0 7965.0 nc|ENSG00000010219|Q9NR20-3|DYRK4;;ENSG00000010219|ENST00000543431|DYRK4;;nc|ENSG00000010219|Q9NR20-4|DYRK4 1.334860881169637 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7969 42.087 124.0 443080.0 25 0 24287.0 28248 PQSDDKLSP 9 104 493.7427625101288 985.4709720870576 2 493.7421752810478 MULTI CID FTMS 0 0 0 7965 294162.625 0.2261752496547736 2 -0.1759452819824218 4 Unmodified _PQSDDKLSP_ ENSG00000047365|ENST00000303965|ARAP2;ENST00000508066.1_1_4:36162071-36231213:-|nuORF 19.256988751693697 0.3154191944385105 3 [PS]QDP 5 5 30.569 0.0 0.0 3.102 0.0 0.0 0.0 458.2277829603577 458.2277829603577 11.980710122479945 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.8913577739914503 0.0 [PS]QDP 3.102 - 348 1 1.66 46201.5 1.0 2795 5172 7965 HBL1_DMSO_200M_050219_1,7969 HBL1_DMSO_200M_050219_1,7969,PQSDDKLSP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7970 42.099 701.0 248990.0 25 0 95793.0 -1 0 126 571.32037814991 570.3131016833099 1 571.3199951052666 MULTI CID FTMS 0 0 0 7965 261752.625 0.2673106994247069 2 -0.1759452819824218 5 3 {I|L}SVS 4 -1 24.685 0.0 0.0 4.3283 0.0 0.0 0.0 181.0734804742797 181.0734804742797 14.1490868344483 0.0 0.0 0.0 0 0.6237125054200235 1.0969100130080565 0.2742275032520141 0.0 {I|L}SVS 4.3283 - 77 + 1 1.66 138950.7 1.0 2796 5172 7965 HBL1_DMSO_200M_050219_1,7970 HBL1_DMSO_200M_050219_1,7970, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7971 42.104 227.0 403070.0 25 0 16561.0 + 2392 AQPDHLDHI 9 134 349.1742363377465 1044.5008796134396 3 349.1745178103447 MULTI CID FTMS 0 0 0 7965 247291.921875 0.8554905517940796 1 -0.0701370239257812 6 Unmodified _AQPDHLDHI_ ENSG00000071994|ENST00000541970|PDCD2;ENST00000544336.5_2_6:170891348-170893772:-|nuORF;nc|ENSG00000071994|Q16342-2|PDCD2;nc|ENSG00000071994|Q16342-3|PDCD2;nc|ENSG00000071994|Q16342-4|PDCD2;nc|ENSG00000071994|Q16342-5|PDCD2 34.10243960390752 0.1078313939113124 3 [QA]PDH{NN|[MP]|[D{I|L}]|[EV]}H{I|L} 9 0 + 32.742 0.0 0.0 3.1347 3.1347 76.588 0.0 0.0 0.0 19.642967140054644 3.1948095894621247 3.1948095894621247 6.777807052660808 0 0.3807196863200844 0.4559319556497244 0.3494850021680094 0.0 + + [QA]PDH{NN|[MP]|[D{I|L}]|[EV]}H{I|L};[QA]PD{[RE]|[WV]}S{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]PD{[RE]|[WV]}T[QT];[QA]PD{M(Oxidation (M))|F}KP{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]PD{[RE]|[WV]}S[SG]V;[QA]PD{M(Oxidation (M))|F}KP[SG]V;[QA]P[RN]{M(Oxidation (M))|F}[DV]V;[QA][WY]{NN|[MP]|[D{I|L}]|[EV]}H{I|L};[QA]{[{M(Oxidation (M))|F}D]|MM}PKP{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]PEEAAS{[QD]|[EN]|[WG]|[KD]|[RS]} 3.1347;2.4858;2.2531;2.1933;2.078;1.7855;1.6336;0.96112;0.63998;0.52461 +;-;-;-;-;-;-;-;-;- + 221 + 1 1.66 77991.9 1.0 2797 5172 7965 HBL1_DMSO_200M_050219_1,7971 HBL1_DMSO_200M_050219_1,7971,AQPDHLDHI True True AQPDHLDHI 42.10375 349.174517810345 1677922.875 7965.0 nc|ENSG00000071994|Q16342-3|PDCD2;;ENSG00000071994|ENST00000541970|PDCD2;;nc|ENSG00000071994|Q16342-5|PDCD2;;nc|ENSG00000071994|Q16342-2|PDCD2;;ENST00000544336.5_2_6:170891348-170893772:-|nuORF;;nc|ENSG00000071994|Q16342-4|PDCD2 5.712780475616455 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7972 42.118 800.0 360470.0 25 0 33210.0 + 24099 LYIQRTKSM 9 225 380.5460082865821 1138.616195459946 3 380.5458251833916 MULTI CID FTMS 0 0 0 7965 207009.609375 1.0 0 0.0 7 Unmodified _LYIQRTKSM_ ENSG00000100129|ENST00000652021|EIF3L;ENST00000457262.1_1_10:43062145-43062928:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L 45.739877483867886 0.0497104363764649 3 {I|L}Y{I|L}Q[K{I|L}][KC]M 9 3 + 60.894 0.0 0.0 5.3481 5.3481 84.05 0.0 0.0 0.0 35.75643416741073 3.899699876253777 3.899699876253777 8.084039362376217 0 0.3494850021680094 2.0 0.0 0.6307196863200843 {I|L}Y{I|L}Q[K{I|L}][KC]M;{I|L}Y{I|L}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VM{I|L};{I|L}Y{I|L}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{M(Oxidation (M))|F}P;{I|L}Y{I|L}Q[Q{I|L}][HQ]P;{I|L}Y{I|L}QG[{I|L}A][HQ]P;{I|L}Y{I|L}QVAA[HQ]P;{I|L}Y{I|L}Q[Q{I|L}][QP]H;{I|L}Y{I|L}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V;{I|L}Y{I|L}QG[{I|L}A][QP]H;{I|L}Y{I|L}QVAA[QP]H 5.3481;4.6381;4.3737;4.2675;4.2273;4.0989;4.0508;4.0322;4.0106;3.8823 -;-;-;-;-;-;-;-;-;- 966 + 1 1.66 226728.4 0.800000011920929 2798 5172 7965 HBL1_DMSO_200M_050219_1,7972 HBL1_DMSO_200M_050219_1,7972,LYIQRTKSM True True LYIQRTKSM 42.117564 380.545825183392 1600288.0 7965.0 ENST00000457262.1_1_10:43062145-43062928:+|nuORF;;nc|ENSG00000100129|Q9Y262-2|EIF3L;;ENST00000495197.1_1_10:38368986-38369799:-|nuORF;;ENSG00000100129|ENST00000652021|EIF3L 0.5599842468897501 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7973 42.131 800.0 292270.0 25 0 32212.0 + 16549 KAWNDIKKV 9 172 551.3244176904839 1100.6342824477676 2 551.3251830935478 MULTI CID FTMS 0 0 0 7965 168417.890625 1.0 0 0.0 8 Unmodified _KAWNDIKKV_ ENSG00000174444|ENST00000307961|RPL4;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF 69.33821966488729 0.021354776001734 3 {[QN]|[E{I|L}]|[KN]}EDK{I|L}KKV 9 4 + 72.393 0.0 0.0 6.5774 6.5774 82.045 0.0 0.0 0.0 2.441869826775246 54.16126433511735 2.441869826775246 2.886024556481374 0 1.2017188504113845 0.0 1.1254223615525998 0.7059771852360797 {[QN]|[E{I|L}]|[KN]}EDK{I|L}KKV;[AG]TRDN{I|L}KKV;[KA]WDN{I|L}KKV;[QT]RDN{I|L}KKV;[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}DK{I|L}KKV;[DN]WAK{I|L}KKV;[AG]TRDGG{I|L}KKV;[KA]WDGG{I|L}KKV;[Q{I|L}]E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KKV;{[QN]|[E{I|L}]|[KN]}WW{I|L}KKV 6.5774;6.3151;6.2706;5.9424;5.9251;5.7784;5.4825;5.434;5.3792;5.2616 -;-;-;-;-;-;-;-;-;- 1200 1 1.66 174723.1 0.9700000286102296 2799 5172 7965 HBL1_DMSO_200M_050219_1,7973 HBL1_DMSO_200M_050219_1,7973,KAWNDIKKV True True KAWNDIKKV 42.131396 551.325183093548 2097534.5 7965.0 ENST00000566622.5_1_15:66794044-66797161:-|nuORF;;ENSG00000174444|ENST00000307961|RPL4;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF 5.3853451410929365 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7974 42.145 800.0 177090.0 25 0 7867.3 5409 DLLAWWPNPQ 10 142 620.3132969374445 1238.612040941689 2 620.3140746951103 MULTI CID FTMS 0 0 0 7965 145701.453125 0.1584007695189188 39 -3.175861358642578 9 Unmodified _DLLAWWPNPQ_ ENSG00000160161|ENST00000291495|CILP2 17.11289562659939 0.5604042439455784 3 [PA]PMPPPPP 9 8 64.07 0.0 0.0 5.1727 0.0 0.0 0.0 354.14479175639525 354.14479175639525 45.09932109439419 0.0 0.0 0.0 0 2.555462187404089 1.3979400086720375 0.0 0.0 [PA]PMPPPPP 5.1727 - 2573 1 1.66 107035.1 0.8999999761581421 2800 5172 7965 HBL1_DMSO_200M_050219_1,7974 HBL1_DMSO_200M_050219_1,7974,DLLAWWPNPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7976 42.15 9.3 4380400.0 25 0 513380.0 + 13732 HQVPAVSSV 9 64 462.2507880449406 922.4870231566812 2 462.2507507205009 MULTI CID FTMS 0 0 0 7975 5642423.0 0.7426561101228272 1 -0.1058082580566406 1 Unmodified _HQVPAVSSV_ ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2 43.85829265575387 0.0542763391141878 3 [R{M(Oxidation (M))|F}]SA{[VA]|[{I|L}G]}SSV 9 4 + 42.84 0.0 0.0 4.644 4.644 80.255 0.0 0.0 0.0 21.62848732905715 6.681212380090216 6.681212380090216 6.478174818886373 0 0.5 0.0 0.6747425010840047 0.0 [R{M(Oxidation (M))|F}]SA{[VA]|[{I|L}G]}SSV;[R{M(Oxidation (M))|F}]S[Q{I|L}]SSV;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AVSW;[R{M(Oxidation (M))|F}]SA{[QD]|[EN]|[WG]|[KD]|[RS]}TV 4.644;3.9417;3.5123;2.0566 -;-;-;- 141 + 1 1.66 37894.6 1.0 2801 5173 7975 HBL1_DMSO_200M_050219_1,7976 HBL1_DMSO_200M_050219_1,7976,HQVPAVSSV True True HQVPAVSSV 42.14955 462.250750720501 82473136.0 7975.0 ENSG00000204256|ENST00000374825|BRD2;;nc|ENSG00000204256|P25440-2|BRD2;;nc|ENSG00000204256|P25440-4|BRD2;;nc|ENSG00000204256|P25440-3|BRD2 6.937130769093831 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7977 42.152 111.0 511000.0 25 0 91366.0 + 5052 DGYEQAARV 9 92 504.7406236745259 1007.466694415852 2 504.7406799197197 MULTI CID FTMS 0 0 0 7975 244315.78125 0.0391590596197841 11 -0.9978599548339844 2 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 29.081581746732265 0.1611639662936252 3 [DG]YEQAARV 9 0 [DG]Y + + 37.228 8.6967 2.5952 3.6952 3.6952 51.718 0.0 0.0 0.0 0.0 28.01943334349849 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.25 + + [DG]YEQAARV 3.6952 + + 129 + 1 1.66 47116.1 1.0 2802 5173 7975 HBL1_DMSO_200M_050219_1,7977 HBL1_DMSO_200M_050219_1,7977,DGYEQAARV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7978 42.155 135.0 691270.0 25 0 60510.0 32670 SDDCSSSE 8 98 415.12832256419534 828.2420921951907 2 415.1283141970634 MULTI CID FTMS 0 0 0 7975 504399.8125 0.988841163959505 -1 0.0701370239257812 3 Unmodified _SDDCSSSE_ ENSG00000250423|ENST00000691062|KIAA1210;nc|ENSG00000250423|Q9ULL0|KIAA1210 2.577480529830294 0.808687252328423 3 V 1 8 12.218 0.0 0.0 1.4752 0.0 0.0 711.1625766696033 0.0 711.1625766696033 0.0 1.7339374311232802 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4752 - 26 + 1 1.66 77705.0 1.0 2803 5173 7975 HBL1_DMSO_200M_050219_1,7978 HBL1_DMSO_200M_050219_1,7978,SDDCSSSE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7979 42.158 152.0 483500.0 25 0 27938.0 + + 34688 RVEPVTTSV 9 105 493.77244556917225 985.5303382051444 2 494.2773620486259 MULTI CID FTMS 0 0 0 7975 425829.90625 0.0191320545732058 -7 0.5785484313964844 4 Unmodified _SPSVERGRV_ ENST00000475124.1_1_3:53880615-53891834:+|nuORF;nc|ENSG00000056736|Q9NRM6-2|IL17RB;ENSG00000056736|ENST00000288167|IL17RB 16.942295170755138 0.3780752226737986 3 [DP][R{I|L}]VTTS 8 -1 26.19 0.0 0.0 2.6575 0.0 0.0 0.0 113.04884091668694 113.04884091668694 6.48894417633365 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9247425010840048 0.0 [DP][R{I|L}]VTTS 2.6575 - 379 1 1.66 60047.3 1.0 2804 5173 7975 HBL1_DMSO_200M_050219_1,7979 HBL1_DMSO_200M_050219_1,7979,SPSVERGRV False False RVEPVTTSV 42.157629 494.277362048626 5535960.5 7975.0 ENST00000475124.1_1_3:53880615-53891834:+|nuORF;;nc|ENSG00000056736|Q9NRM6-2|IL17RB;;ENSG00000056736|ENST00000288167|IL17RB 4.761050383249919 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7980 42.159 76.0 1080300.0 25 0 64607.0 + 30383 RAMEVRGMEA 10 104 383.8545823264765 1148.5419175796296 3 383.8550292849541 MULTI CID FTMS 0 0 0 7975 420879.625 0.8277071620465406 -1 0.0701370239257812 5 Unmodified _RAMEVRGMEA_ ENSG00000101811|ENST00000372972|CSTF2;nc|ENSG00000101811|P33240-2|CSTF2 11.631370582801994 0.6523789101569337 3 GMEA 4 6 28.22 0.0 0.0 2.457 0.0 0.0 742.3927915900975 0.0 742.3927915900975 0.0 16.22994718840225 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + GMEA 2.457 + + 86 1 1.66 71259.6 1.0 2805 5173 7975 HBL1_DMSO_200M_050219_1,7980 HBL1_DMSO_200M_050219_1,7980,RAMEVRGMEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7981 42.164 222.0 471800.0 25 0 54902.0 + 29950 QSPCYDRMAS 10 106 579.2387167471795 1156.462880561159 2 579.2396118044853 MULTI CID FTMS 0 0 0 7975 394534.46875 0.5637473114496078 -1 0.0701370239257812 6 Unmodified _QSPCYDRMAS_ REV__ENSG00000169258|ENST00000303991|GPRIN1;REV__nc|ENSG00000169258|Q7Z2K8-2|GPRIN1 26.268140514670165 0.3785003716575977 3 {[QS]|[NT]}PS 4 -1 35.662 0.0 0.0 3.0837 0.0 0.0 0.0 754.2670971881831 754.2670971881831 14.950593636514142 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.3494850021680094 0.0 {[QS]|[NT]}PS 3.0837 - 119 + 1 1.66 84763.4 1.0 2806 5173 7975 HBL1_DMSO_200M_050219_1,7981 HBL1_DMSO_200M_050219_1,7981,QSPCYDRMAS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7982 42.177 800.0 159610.0 25 0 23696.0 -1 0 72 1123.3671395192748 2244.7197261053498 2 1123.366992175579 MULTI CID FTMS 0 0 0 7975 222827.265625 0.8198210746969622 -1 0.0701370239257812 7 3 A 1 -1 4.6041 0.0 0.0 0.20511 0.0 0.0 1254.401624153981 916.2620943658812 2170.663718519862 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.20511 - 58 + 1 1.66 98548.2 0.7200000286102295 2807 5173 7975 HBL1_DMSO_200M_050219_1,7982 HBL1_DMSO_200M_050219_1,7982, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7983 42.18 149.0 417200.0 25 0 27868.0 + 39105 TWPSPRTTPH 10 95 393.868493460061 1178.583650980383 3 393.8683349490166 MULTI CID FTMS 0 0 0 7975 218001.1875 0.4536414870567867 3 -0.2677993774414062 8 Unmodified _TWPSPRTTPH_ ENST00000294189.10_2_3:52028123-52029875:-|nuORF 27.628801355627647 0.3479284626772844 3 {[WT]|[RM]}PS[WK][HT]H 9 4 + 26.347 0.0 0.0 2.2355 2.2355 80.259 0.0 0.0 0.0 13.248031033778748 3.375912339897201 3.375912339897201 16.75968732272281 0 0.4247425010840047 0.0 0.25 0.4247425010840047 {[WT]|[RM]}PS[WK][HT]H;{[WT]|[RM]}P[QA][TP]KNH 2.2355;0.81346 -;- 72 + 1 1.66 54462.1 1.0 2808 5173 7975 HBL1_DMSO_200M_050219_1,7983 HBL1_DMSO_200M_050219_1,7983,TWPSPRTTPH False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7984 42.194 800.0 81557.0 25 0 5513.8 -1 0 78 820.6900754348756 2459.0483969048264 3 821.0250121951103 MULTI CID FTMS 0 0 0 7975 155428.203125 1.0 0 0.0 9 3 V[WR]GTWG 7 -1 22.057 0.0 0.0 0.89698 0.0 0.0 978.422006379239 635.2071627252561 1613.629169104495 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.7614393726401688 0.0 V[WR]GTWG 0.89698 - 123 + 1 1.66 56040.7 0.7799999713897705 2809 5173 7975 HBL1_DMSO_200M_050219_1,7984 HBL1_DMSO_200M_050219_1,7984, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 7985 42.208 800.0 72896.0 25 0 3938.2 + 31282 RLWRRRQWKD 10 68 750.428912547633 0 750.4280883669853 PEAK CID FTMS 0 0 0 7975 125742.375 1.0 0 0.0 10 Unmodified _RLWRRRQWKD_ REV__nc|ENSG00000105618|Q8WWY3-2|PRPF31 0.3506318815782774 0.3961065659209837 3 V 1 -1 3.9794 0.0 0.0 0.2655 0.0 0.0 961.6487053669472 435.09784876041255 1396.7465541273598 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.2655 - 11 + 1 1.66 47322.5 0.7599999904632568 2810 5173 7975 HBL1_DMSO_200M_050219_1,7985 HBL1_DMSO_200M_050219_1,7985,RLWRRRQWKD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7986 42.222 800.0 299120.0 25 0 23216.0 + 23172 LSRAVQSL 8 218 437.262611889174 872.510670845148 2 437.2634765505791 MULTI CID FTMS 0 0 0 7975 112601.375 0.9405629526299524 1 -0.1058082580566406 11 Unmodified _LSRAVQSL_ REV__ENST00000460019.1_1_1:98320703-98348836:-|nuORF 15.847184025352805 0.6768015514314958 3 [VG]{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}PK 8 -1 [VG]{[NV]|[RG]}{M(Oxidation (M))|F}{I|L} + + 17.902 5.8637 0.9317 2.0517 2.0517 48.874 0.0 0.0 0.0 0.0 3.995471485151187 0.0 0.0 0 0.5 0.0 0.0 0.3851518780601923 [VG]{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}PK 2.0517 - 411 + 1 1.66 184958.4 0.6499999761581421 2811 5173 7975 HBL1_DMSO_200M_050219_1,7986 HBL1_DMSO_200M_050219_1,7986,LSRAVQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7987 42.237 800.0 193800.0 25 0 12265.0 + + 31959 RVHDYDMRV 9 189 397.8549504930573 0 397.5292846560478 PEAK CID FTMS 0 0 0 -1 0 12 Unmodified _RVDRMQFHC_ ENSG00000083896|ENST00000344157|YTHDC1;nc|ENSG00000083896|Q96MU7-2|YTHDC1 2.059750862983233 0.3444685223463734 3 YD 2 -1 5.5732 0.0 0.0 0.70218 0.0 0.0 111.3804809648271 401.1982335149215 512.5787144797486 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YD 0.70218 - 22 + 1 1.66 120966.7 0.5199999809265137 2812 5173 7975 HBL1_DMSO_200M_050219_1,7987 HBL1_DMSO_200M_050219_1,7987,RVDRMQFHC False False RVHDYDMRV 42.237176 397.529284656048 588653.6875 7975.0 ENSG00000083896|ENST00000344157|YTHDC1;;nc|ENSG00000083896|Q96MU7-2|YTHDC1 4.942688226699829 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7988 42.251 800.0 153600.0 25 0 11017.0 -1 TSNGMEWCKE 10 165 621.2529260562962 0 621.2532226443291 PEAK CID FTMS 0 0 0 7975 84341.3125 1.0 0 0.0 13 Carbamidomethyl (C) _TSNGMEWC(Carbamidomethyl (C))KE_ ENSG00000174951|ENST00000645652|FUT1 10.073929032068715 0.3742530088597855 3 PPHP 4 -1 15.433 0.0 0.0 1.2441 0.0 0.0 455.0925206431278 354.142005935852 809.2345265789797 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPHP 1.2441 - 435 + 1 1.66 93276.3 0.6700000166893005 2813 5173 7975 HBL1_DMSO_200M_050219_1,7988 HBL1_DMSO_200M_050219_1,7988,TSNGMEWCKE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7990 42.256 86.0 675890.0 25 0 118380.0 -1 LTCPHNSCV 9 108 515.7273140154333 1029.4400750976663 2 515.7276489138603 MULTI CID FTMS 0 0 0 7989 532770.875 0.3287347493723279 2 -0.1619911193847656 1 Carbamidomethyl (C) _LTCPHNSC(Carbamidomethyl (C))V_ ENSG00000283536|ENST00000635789|unknown 15.847184025352805 0.4077185912009129 3 [NS]YN{[QN]|[E{I|L}]|[KN]}[YQ] 8 -1 + 23.019 0.0 0.0 2.2361 2.2361 68.341 0.0 0.0 0.0 1.5532428791317408 1.5532428791317408 1.5532428791317408 1.5532428791317408 0 0.0 0.0 0.4247425010840047 1.086696871556164 [NS]YN{[QN]|[E{I|L}]|[KN]}[YQ];[TP]Q{I|L}ED{[QC]|[C(Carbamidomethyl (C))A]}P;[NS]YGG{[QN]|[E{I|L}]|[KN]}[YQ];[TP][AG]{I|L}ED{[QC]|[C(Carbamidomethyl (C))A]}P;[TP]{[QN]|[E{I|L}]|[KN]}QD{[QC]|[C(Carbamidomethyl (C))A]}P;[TP]Q{I|L}{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F};[DN]{[MG]|[TS]}[R{M(Oxidation (M))|F}][YQ];[TP]Q{[MG]|[TS]}[HS]{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.2361;2.0852;1.3364;1.1907;1.1138;0.95997;0.28767;0.046259 -;-;-;-;-;-;-;- 231 1 1.662 51416.1 1.0 2814 5174 7989 HBL1_DMSO_200M_050219_1,7990 HBL1_DMSO_200M_050219_1,7990,LTCPHNSCV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7991 42.258 104.0 498480.0 25 0 38102.0 -1 QTMEQRLQ 8 91 525.2547443244074 1048.4949357156147 2 525.2545043826103 MULTI CID FTMS 0 0 0 7989 214174.515625 0.1869795547532462 2 -0.1619911193847656 2 Oxidation (M) _QTM(Oxidation (M))EQRLQ_ ENSG00000110427|ENST00000658780|KIAA1549L;nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L;nc|ENSG00000110427|Q6ZVL6|KIAA1549L 22.736283301280096 0.5659792798204337 3 PW{I|L}Q 4 -1 33.928 0.0 0.0 3.2359 0.0 0.0 506.2334156720719 0.0 506.2334156720719 0.0 23.090444867052497 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 PW{I|L}Q 3.2359 - 389 1 1.662 45217.2 1.0 2815 5174 7989 HBL1_DMSO_200M_050219_1,7991 HBL1_DMSO_200M_050219_1,7991,QTMEQRLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7992 42.259 30.0 2239000.0 25 0 143620.0 -1 QVSCCHANAM 10 90 560.7214550218333 1119.4283571104663 2 560.7217895388603 MULTI CID FTMS 0 0 0 7989 1782768.125 0.2204816530582235 -2 0.1759452819824218 3 Carbamidomethyl (C) _QVSC(Carbamidomethyl (C))CHANAM_ ENST00000313386.8_1_5:177575040-177575496:+|nuORF 6.723162845929126 0.6955379296933136 3 [YG]G 3 -1 21.171 0.0 0.0 1.8912 0.0 0.0 0.0 839.298815444704 839.298815444704 4.71726222832956 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YG]G 1.8912 - 345 1 1.662 53675.8 1.0 2816 5174 7989 HBL1_DMSO_200M_050219_1,7992 HBL1_DMSO_200M_050219_1,7992,QVSCCHANAM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 7993 42.262 125.0 988620.0 25 0 104550.0 + 43730 YDIGFGGM 8 105 430.1876016740957 858.3606504149914 2 430.1877624392509 MULTI CID FTMS 0 0 0 7989 468804.625 1.0 0 0.0 4 Unmodified _YDIGFGGM_ REV__ENSG00000116698|ENST00000688051|SMG7;REV__nc|ENSG00000116698|Q92540-2|SMG7;REV__nc|ENSG00000116698|Q92540-4|SMG7;REV__nc|ENSG00000116698|Q92540-5|SMG7;REV__nc|ENSG00000116698|Q92540|SMG7 10.183394434864962 0.7604730176254005 3 {[YD]|[{M(Oxidation (M))|F}M]}{I|L} 3 -1 33.952 0.0 0.0 3.9555 0.0 0.0 0.0 464.1653249503124 464.1653249503124 24.19851504063775 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[YD]|[{M(Oxidation (M))|F}M]}{I|L} 3.9555 + + 27 + 1 1.662 100191.4 1.0 2817 5174 7989 HBL1_DMSO_200M_050219_1,7993 HBL1_DMSO_200M_050219_1,7993,YDIGFGGM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7994 42.264 114.0 710760.0 25 0 47916.0 + 4301 DARIVINRA 9 106 343.2051086131363 1026.593496439609 3 343.2046386599541 MULTI CID FTMS 0 0 0 7989 421477.6875 1.0 0 0.0 5 Unmodified _DARIVINRA_ ENSG00000101182|ENST00000370873|PSMA7;ENST00000484488.5_1_20:60714188-60718428:-|nuORF;nc|ENSG00000101182|O14818-2|PSMA7;nc|ENSG00000101182|O14818-4|PSMA7 19.62595529434964 0.305431704817896 3 V{I|L}A[RN] 5 6 32.792 0.0 0.0 3.1942 0.0 0.0 455.2489056540738 0.0 455.2489056540738 0.0 23.037771509356908 0.0 0.0 0 0.8494850021680094 0.0 0.0 1.3494850021680094 V{I|L}A[RN] 3.1942 - 106 + 1 1.662 69034.1 1.0 2818 5174 7989 HBL1_DMSO_200M_050219_1,7994 HBL1_DMSO_200M_050219_1,7994,DARIVINRA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7995 42.269 264.0 345680.0 25 0 42833.0 + 32665 SDAYQTREI 9 101 541.759191800432 1081.5038306676638 2 541.7590209841728 MULTI CID FTMS 0 0 0 7989 423568.125 0.078277579769304 4 -0.3806076049804687 6 Unmodified _SDAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 36.506200033944 0.094635877243972 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 8 8 47.058 0.0 0.0 4.3512 0.0 0.0 0.0 199.03385430465065 199.03385430465065 35.14664559875417 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.3807196863200844 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 4.3512 - 183 1 1.662 73609.7 1.0 2819 5174 7989 HBL1_DMSO_200M_050219_1,7995 HBL1_DMSO_200M_050219_1,7995,SDAYQTREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 7996 42.272 152.0 503470.0 25 0 42370.0 + 14532 IGWTYSGAV 9 113 477.2382291819852 0 477.2371703982353 PEAK CID FTMS 0 0 0 7989 389186.78125 0.1677272939328882 -2 0.1759452819824218 7 Unmodified _IGWTYSGAV_ REV__ENSG00000279761|ENST00000623930|OR5D13 24.67388899826682 0.1587009629985955 3 AAE 3 -1 28.729 0.0 0.0 3.0163 0.0 0.0 117.08064535145792 561.2454928033811 678.3261381548391 0.0 0.0 0.0 0.0 0 1.0 0.0 0.8807196863200843 0.0 AAE 3.0163 - 114 + 1 1.662 64042.5 1.0 2820 5174 7989 HBL1_DMSO_200M_050219_1,7996 HBL1_DMSO_200M_050219_1,7996,IGWTYSGAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7997 42.275 156.0 434460.0 25 0 26696.0 + 37019 TFQQNASSM 9 116 507.221691438949 1012.428829944698 2 507.2216979861259 MULTI CID FTMS 0 0 0 7989 373469.4375 1.0 0 0.0 8 Unmodified _TFQQNASSM_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 15.847184025352805 0.4077185912009129 3 SM 2 7 22.078 0.0 0.0 2.1807 0.0 0.0 776.3455607570012 0.0 776.3455607570012 0.0 11.10924374808178 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 + SM 2.1807 + + 178 + 1 1.662 57645.4 1.0 2821 5174 7989 HBL1_DMSO_200M_050219_1,7997 HBL1_DMSO_200M_050219_1,7997,TFQQNASSM False True TFQQNASSM 42.275247 507.221697986126 2429438.25 7989.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 1.5943478047847748 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 7998 42.28 252.0 242890.0 25 0 10512.0 + 19985 LIKSFELMCC 10 107 593.7852073059576 1185.555861678715 2 593.7855712771416 MULTI CID FTMS 0 0 0 7989 320213.65625 0.7087653611790026 2 -0.1619911193847656 9 Unmodified _LIKSFELMCC_ REV__ENSG00000217128|ENST00000510461|FNIP1;REV__nc|ENSG00000217128|Q8TF40-3|FNIP1 7.289230182591677 0.6929195370588109 3 {I|L}PD{[{M(Oxidation (M))|F}C]|[YS]} 5 -1 23.456 0.0 0.0 1.9784 0.0 0.0 592.2855702130875 0.0 592.2855702130875 0.0 0.7795501485934864 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}PD{[{M(Oxidation (M))|F}C]|[YS]} 1.9784 - 52 1 1.662 52376.8 1.0 2822 5174 7989 HBL1_DMSO_200M_050219_1,7998 HBL1_DMSO_200M_050219_1,7998,LIKSFELMCC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 7999 42.283 147.0 789410.0 25 0 357540.0 + 38231 TPSMLYRDG 9 97 347.1675566639545 0 347.1687805056572 PEAK CID FTMS 0 0 0 7989 353167.8125 0.9396971332484492 -1 0.1058082580566406 10 Unmodified _TPSMLYRDG_ REV__ENST00000337672.7_2_11:57471767-57471908:-|nuORF 4.5288652416199255 0.3444685223463734 3 D 1 -1 2.4743 0.0 0.0 0.35739 0.0 0.0 363.1907346838578 211.07322107486564 574.2639557587235 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.35739 + + 3 + 1 1.662 100350.7 1.0 2823 5174 7989 HBL1_DMSO_200M_050219_1,7999 HBL1_DMSO_200M_050219_1,7999,TPSMLYRDG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8000 42.286 166.0 641570.0 25 0 40919.0 -1 QGCMPQPVCNL 11 117 402.5072270356209 1204.4998517070628 3 402.5074035525322 MULTI CID FTMS 0 0 0 7989 284108.21875 0.7702650471505965 -1 0.1058082580566406 11 Oxidation (M) _QGCM(Oxidation (M))PQPVCNL_ ENSG00000204936|ENST00000618265|CD177 4.11662792887243 0.8557254166428417 3 {[QG]|[NA]}YPYV 6 -1 40.978 0.0 0.0 3.4021 0.0 0.0 0.0 494.1519869440063 494.1519869440063 28.96651968404369 0.0 0.0 0.0 0 0.5114393726401688 1.0457574905606752 0.0 0.0 {[QG]|[NA]}YPYV 3.4021 - 73 + 1 1.662 87814.1 1.0 2824 5174 7989 HBL1_DMSO_200M_050219_1,8000 HBL1_DMSO_200M_050219_1,8000,QGCMPQPVCNL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8001 42.29 207.0 512720.0 25 0 53496.0 24398 MFPERVRSA 9 102 364.85879245084885 1091.5545479527466 3 364.8588744997978 MULTI CID FTMS 0 0 0 7989 279589.34375 0.7594201798785537 -3 0.270721435546875 12 Unmodified _MFPERVRSA_ ENSG00000100216|ENST00000216034|TOMM22;ENST00000492561.1_1_22:39078186-39079843:+|nuORF 13.042465956692816 0.4836390050082244 3 M{M(Oxidation (M))|F}A 3 6 26.198 0.0 0.0 2.4001 0.0 0.0 0.0 739.3860072418672 739.3860072418672 15.740312677277188 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{M(Oxidation (M))|F}A 2.4001 - 41 + 1 1.662 94514.1 1.0 2825 5174 7989 HBL1_DMSO_200M_050219_1,8001 HBL1_DMSO_200M_050219_1,8001,MFPERVRSA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8002 42.304 800.0 424860.0 25 0 19071.0 -1 0 108 1115.1629266664377 5570.7782509991885 5 1115.564746081829 MULTI CID FTMS 0 0 0 7989 242736.125 0.4037741106117361 -4 0.4032554626464844 13 3 PQGPP 5 -1 52.206 0.0 0.0 0.93714 0.0 0.0 1596.7596730278744 3494.7490410147607 5091.508714042635 0.0 0.0 0.0 0.0 0 2.0 0.0 0.0 0.4247425010840047 PQGPP 0.93714 - 95 + 1 1.662 210286.4 0.7699999809265137 2826 5174 7989 HBL1_DMSO_200M_050219_1,8002 HBL1_DMSO_200M_050219_1,8002, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8003 42.307 157.0 478990.0 25 0 67422.0 + 28213 PQLNRLTIT 9 100 352.5451255580798 1054.6135472744395 3 352.5450317263603 MULTI CID FTMS 0 0 0 7989 148044.890625 0.2101544859124296 4 -0.3806076049804687 14 Unmodified _PQLNRLTIT_ REV__ENSG00000095970|ENST00000373113|TREM2;REV__nc|ENSG00000095970|Q9NZC2-2|TREM2;REV__nc|ENSG00000095970|Q9NZC2-3|TREM2 1.844237919475145 0.850302753031785 3 {I|L} 1 -1 10.596 0.0 0.0 1.0047 0.0 0.0 923.5184830427974 0.0 923.5184830427974 0.0 10.507288203793886 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0047 + + 25 + 1 1.662 65003.9 1.0 2827 5174 7989 HBL1_DMSO_200M_050219_1,8003 HBL1_DMSO_200M_050219_1,8003,PQLNRLTIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8004 42.321 800.0 191460.0 25 0 23860.0 + 32412 RYYSSEYHY 9 115 634.2716806717405 1266.5288084102808 2 634.2710449099541 MULTI CID FTMS 0 0 0 7989 139145.96875 0.9763680852934682 -1 0.1058082580566406 15 Unmodified _RYYSSEYHY_ ENSG00000109861|ENST00000227266|CTSC;ENST00000533897.1_1_11:88027176-88029469:-|nuORF 29.081581746732265 0.1611639662936252 3 EYHY 4 5 40.79 0.0 0.0 3.2206 0.0 0.0 656.289354392775 0.0 656.289354392775 0.0 27.69077524932108 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 + EYHY 3.2206 + + 85 1 1.662 116388.5 0.8899999856948853 2828 5174 7989 HBL1_DMSO_200M_050219_1,8004 HBL1_DMSO_200M_050219_1,8004,RYYSSEYHY False True RYYSSEYHY 42.320834 634.271044909954 850548.1875 7989.0 ENST00000533897.1_1_11:88027176-88029469:-|nuORF;;ENSG00000109861|ENST00000227266|CTSC 2.683875401814779 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8005 42.328 428.0 378100.0 25 0 26864.0 + 43440 WSLHKMVV 8 176 500.27680301956775 998.5390531059356 2 500.2652160525322 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _WSLHKMVV_ REV__ENST00000329565.5_1_16:11771853-11771931:+|nuORF 12.531546534597751 0.7257836412119636 3 WS{I|L}Q{[WN]|[YH]}V 7 -1 33.02 0.0 0.0 3.3068 0.0 0.0 0.0 82.06690393619374 82.06690393619374 5.679892160759103 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 WS{I|L}Q{[WN]|[YH]}V 3.3068 - 681 + 1 1.662 124658.1 1.0 2829 5174 7989 HBL1_DMSO_200M_050219_1,8005 HBL1_DMSO_200M_050219_1,8005,WSLHKMVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8006 42.335 263.0 299560.0 25 0 50820.0 + 18560 LAAEARAI 8 102 407.7426415896492 813.4707302460985 2 407.7428466677666 MULTI CID FTMS 0 0 0 7989 125060.2109375 0.4537473905079116 -1 0.1058082580566406 17 Unmodified _LAAEARAI_ ENSG00000197157|ENST00000354725|SND1 25.399314129420983 0.5099049743284904 3 {I|L}AAEA 5 3 61.81 0.0 0.0 7.5983 0.0 0.0 0.0 355.2089937799438 355.2089937799438 52.66162753101746 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {I|L}AAEA 7.5983 + + 106 + 1 1.662 65590.5 1.0 2830 5174 7989 HBL1_DMSO_200M_050219_1,8006 HBL1_DMSO_200M_050219_1,8006,LAAEARAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8008 42.339 6.8 8154700.0 25 0 975210.0 + 5780 DPPPGSHVI 9 78 459.7369120917008 917.4592712502016 2 459.7378112673759 MULTI CID FTMS 0 0 0 8007 6951727.0 0.2771037392456646 5 -0.4380950927734375 1 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 32.30548876998284 0.1201446275138228 3 DPPP 4 5 56.67 0.0 0.0 6.1769 0.0 0.0 0.0 508.2537935846313 508.2537935846313 45.83271989957264 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + DPPP 6.1769 + + 160 + 1 1.662 49987.6 1.0 2831 5175 8007 HBL1_DMSO_200M_050219_1,8008 HBL1_DMSO_200M_050219_1,8008,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8009 42.341 66.0 884230.0 25 0 75762.0 21404 LPGGSLWLPGP 11 78 547.3062212689401 1092.5978896046802 2 547.3084594607353 MULTI CID FTMS 0 0 0 8007 865001.25 0.5618973264038176 1 -0.0782279968261718 2 Unmodified _LPGGSLWLPGP_ ENST00000419336.6_1_7:100491185-100491476:-|nuORF 22.736283301280096 0.5583477779825423 3 {I|L}PWWVS 6 8 44.628 0.0 0.0 4.0846 0.0 0.0 0.0 321.15744959049067 321.15744959049067 21.326994156836392 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.3252574989159953 0.0 {I|L}PWWVS 4.0846 - 350 + 1 1.662 50455.6 1.0 2832 5175 8007 HBL1_DMSO_200M_050219_1,8009 HBL1_DMSO_200M_050219_1,8009,LPGGSLWLPGP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8010 42.342 31.0 1390300.0 25 0 193290.0 -1 0 55 422.1227600193153 842.2309671054306 2 422.1226989626884 MULTI CID FTMS 0 0 0 8007 1963009.0 1.0 0 0.0 3 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.662 39038.5 1.0 2833 5175 8007 HBL1_DMSO_200M_050219_1,8010 HBL1_DMSO_200M_050219_1,8010, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8011 42.343 58.0 1314000.0 25 0 215650.0 + 22508 PLPPTIGR 8 73 425.7608368711503 849.5071208091006 2 425.7607299685478 MULTI CID FTMS 0 0 0 8007 1297853.125 0.7595464853868416 -2 0.1895713806152343 4 Unmodified _LPVTAPRP_ ENST00000539759.5_1_11:47639025-47663996:-|nuORF;ENSG00000109919|ENST00000302503|MTCH2 26.88365393820708 0.4786498634179528 3 {I|L}PVP[TA][RP] 8 2 + 63.945 0.0 0.0 7.5273 7.5273 80.942 0.0 0.0 0.0 56.95554701812867 7.759621790487685 7.759621790487685 0.4845500650402812 0 0.4247425010840047 2.0 0.3494850021680094 0.3807196863200844 {I|L}PVP[TA][RP];{I|L}PPV[TA][RP];{I|L}P[{I|L}T][PG][RP];{I|L}VPP[TA][RP] 7.5273;7.4703;5.2631;3.8705 -;-;-;- 65 + 1 1.662 66603.3 1.0 2834 5175 8007 HBL1_DMSO_200M_050219_1,8011 HBL1_DMSO_200M_050219_1,8011,LPVTAPRP False False PLPPTIGR 42.343338 425.760729968548 27673376.0 8007.0 ENST00000539759.5_1_11:47639025-47663996:-|nuORF;;ENSG00000109919|ENST00000302503|MTCH2 1.2806134323279064 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8012 42.345 44.0 1032900.0 25 0 83463.0 + -1 LCCGGAGSNCC 11 68 579.6953908207377 1157.3762287082752 2 579.6957275271416 MULTI CID FTMS 0 0 0 8007 952053.0625 1.0 0 0.0 5 3 Carbamidomethyl (C) _LCC(Carbamidomethyl (C))GGAGSNC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ REV__ENSG00000159455|ENST00000368780|LCE2B 1.4819007175156935 0.86815623132643 3 MS 2 -1 18.583 0.0 0.0 1.6057 0.0 0.0 0.0 936.2794684855386 936.2794684855386 9.119543704721591 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MS 1.6057 - 12 + 1 1.662 40630.9 1.0 2835 5175 8007 HBL1_DMSO_200M_050219_1,8012 HBL1_DMSO_200M_050219_1,8012,LCCGGAGSNCC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8013 42.346 57.0 1370800.0 25 0 138730.0 + 32277 RWPKKSAEF 9 100 383.5450870782333 1147.6134318349 3 383.5450622439384 MULTI CID FTMS 0 0 0 8007 836763.0 0.2143918150358388 -6 0.5718345642089844 6 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 29.081581746732265 0.1611639662936252 3 [WR][KP]KE{[SA]|[TG]}{M(Oxidation (M))|F} 9 2 + 38.636 0.0 0.0 3.3666 3.3666 50.959 0.0 0.0 0.0 11.99741839986175 18.25643416741073 11.99741839986175 0.0 0 0.4247425010840047 1.2218487496163564 0.3807196863200844 0.0 [WR][KP]KE{[SA]|[TG]}{M(Oxidation (M))|F};[WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F};[KP][WR]K{[SA]|[TG]}E{M(Oxidation (M))|F};[KP][WR]KE{[SA]|[TG]}{M(Oxidation (M))|F} 3.3666;3.3666;1.9253;1.9253 -;+;-;- + 83 1 1.662 66438.3 1.0 2836 5175 8007 HBL1_DMSO_200M_050219_1,8013 HBL1_DMSO_200M_050219_1,8013,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8014 42.348 101.0 672800.0 25 0 54631.0 5906 DPYLEFHK 8 101 524.757108756463 0 524.7566406130791 PEAK CID FTMS 0 0 0 8007 483610.875 0.9147477052615252 -1 0.0837631225585937 7 Unmodified _DPYLEFHK_ ENSG00000085719|ENST00000517490|CPNE3 32.30548876998284 0.2094692153732555 3 PYEQAA 6 5 53.409 0.0 0.0 5.0987 0.0 0.0 115.02712253241675 270.1575106256469 385.18463315806366 0.0 0.0 0.0 0.0 0 1.6421590589602533 0.0 0.3807196863200844 0.6549471895720984 PYEQAA 5.0987 - 382 + 1 1.662 57301.7 1.0 2837 5175 8007 HBL1_DMSO_200M_050219_1,8014 HBL1_DMSO_200M_050219_1,8014,DPYLEFHK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8015 42.35 72.0 718240.0 25 0 120980.0 -1 ALTVEQKMK 9 81 532.2955941378355 0 532.2971069216728 PEAK CID FTMS 0 0 0 8007 330877.375 0.924867865736844 -9 0.7681198120117188 8 Oxidation (M) _ALTVEQKM(Oxidation (M))K_ ENST00000339865.9_2_11:11942024-11944340:+|nuORF 7.910154910731844 0.3362437653303669 3 EA{I|L}D 4 -1 13.576 0.0 0.0 1.2777 0.0 0.0 549.2971966488553 82.06695734195546 631.3641539908108 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 EA{I|L}D 1.2777 - 39 + 1 1.662 43731.2 1.0 2838 5175 8007 HBL1_DMSO_200M_050219_1,8015 HBL1_DMSO_200M_050219_1,8015,ALTVEQKMK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8016 42.354 191.0 349680.0 25 0 16366.0 + 42099 VRKDLQNF 8 111 510.28489757069394 1018.555242208188 2 510.2858459353447 MULTI CID FTMS 0 0 0 8007 370668.09375 1.0 0 0.0 9 Unmodified _VRKDLQNF_ ENSG00000163220|ENST00000368738|S100A9 36.12702656103203 0.299085846329477 3 N{M(Oxidation (M))|F} 2 6 28.188 0.0 0.0 2.7674 0.0 0.0 739.4323612040848 0.0 739.4323612040848 0.0 13.138181262758264 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.5 + N{M(Oxidation (M))|F} 2.7674 + + 112 + 1 1.662 57553.1 1.0 2839 5175 8007 HBL1_DMSO_200M_050219_1,8016 HBL1_DMSO_200M_050219_1,8016,VRKDLQNF False True VRKDLQNF 42.353529 510.285845935345 2084376.0 8007.0 ENSG00000163220|ENST00000368738|S100A9 4.959548632303874 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8017 42.359 275.0 482210.0 25 0 75937.0 + 33339 SGAPPVRSI 9 135 442.2532936218532 882.4920343105064 2 442.2537414431572 MULTI CID FTMS 0 0 0 8007 343044.4375 0.6568846851161768 -1 0.0837631225585937 10 Unmodified _SGAPPVRSI_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35 20.41453444215458 0.284085796332423 3 [SG]A{I|L}{I|L} 5 5 29.371 0.0 0.0 3.3282 0.0 0.0 0.0 438.2132922052908 438.2132922052908 16.429264848684085 0.0 0.0 0.0 0 0.9247425010840048 1.0457574905606752 0.0 0.0 [SG]A{I|L}{I|L} 3.3282 - 197 1 1.662 104258.6 1.0 2840 5175 8007 HBL1_DMSO_200M_050219_1,8017 HBL1_DMSO_200M_050219_1,8017,SGAPPVRSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8018 42.362 176.0 367230.0 25 0 32764.0 + 32540 SANDKVYTV 9 92 498.7536446832495 995.492736433299 2 498.7541076540947 MULTI CID FTMS 0 0 0 8007 280510.84375 0.7496281233297701 -1 0.0837631225585937 11 Unmodified _SANDKVYTV_ ENSG00000079739|ENST00000371084|PGM1;nc|ENSG00000079739|P36871-2|PGM1;nc|ENSG00000079739|P36871-3|PGM1 43.77239144664712 0.0547478964384323 3 {[SA]|[TG]}[QA]VYTGTV 10 5 + 52.84 0.0 0.0 5.3079 5.3079 83.863 0.0 0.0 0.0 15.981362441963327 8.507112333562858 8.507112333562858 8.05462187404089 0 1.1989700043360187 2.0 0.6747425010840047 0.0 {[SA]|[TG]}[QA]VYTGTV;{[SA]|[TG]}[QA]VTGYTV;{[SA]|[TG]}[DN]KVYTV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TY[HT]TV;[{M(Oxidation (M))|F}V][{I|L}P]YTGTV;{[SA]|[TG]}[QA]{[SA]|[TG]}VYTV;{[QD]|[EN]|[WG]|[KD]|[RS]}NVYTGTV;{[TV]|[{I|L}S]}QQYTGTV;{[DA]|[EG]}[NS]KVYTV;[{M(Oxidation (M))|F}V][{I|L}P]TGYTV 5.3079;4.4988;4.4846;3.7025;3.5852;3.5839;3.4948;3.1613;3.0118;2.7761 -;-;+;-;-;-;-;-;-;- + 431 1 1.662 53521.2 1.0 2841 5175 8007 HBL1_DMSO_200M_050219_1,8018 HBL1_DMSO_200M_050219_1,8018,SANDKVYTV True True SANDKVYTV 42.362019 498.754107654095 1993091.75 8007.0 nc|ENSG00000079739|P36871-3|PGM1;;ENSG00000079739|ENST00000371084|PGM1;;nc|ENSG00000079739|P36871-2|PGM1 5.202001253763835 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8019 42.37 444.0 264740.0 25 0 17002.0 38684 TTLRVVHH 8 143 481.7790405561032 961.5435281790064 2 481.7790405154228 MULTI CID FTMS 0 0 0 8007 181740.046875 0.0515192554726792 6 -0.5150909423828125 12 Unmodified _TTLRVVHH_ ENSG00000189077|ENST00000493111|TMEM120A;ENST00000417509.5_1_7:75616492-75616693:-|nuORF;ENST00000440632.5_1_7:75616492-75617528:-|nuORF 13.50788311687929 0.7113601687236069 3 [{I|L}T]RVPP 6 4 12.725 0.0 0.0 1.3234 0.0 0.0 0.0 295.113082641425 295.113082641425 1.3050476586494335 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.4247425010840047 [{I|L}T]RVPP 1.3234 - 164 1 1.662 92154.8 1.0 2842 5175 8007 HBL1_DMSO_200M_050219_1,8019 HBL1_DMSO_200M_050219_1,8019,TTLRVVHH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8020 42.384 800.0 252390.0 25 0 27963.0 + 39015 TVSQRPQMGK 10 185 566.2983388881024 1130.5821248430047 2 566.2975341677666 MULTI CID FTMS 0 0 0 8007 172113.140625 0.9412317655822786 -3 0.2597084045410156 13 Unmodified _TVSQRPQMGK_ REV__ENSG00000003987|ENST00000180173|MTMR7;REV__nc|ENSG00000003987|Q9Y216-2|MTMR7 12.240655878213236 0.6421556946785427 3 [Q{I|L}]{[CP]|[EA]}VQQ{I|L} 8 -1 24.324 0.0 0.0 2.1515 0.0 0.0 0.0 218.0662306381797 218.0662306381797 8.866772118856266 0.0 0.0 0.0 0 0.0 0.744727494896694 1.066901560044258 0.7614393726401688 [Q{I|L}]{[CP]|[EA]}VQQ{I|L} 2.1515 - 1166 1 1.662 151784.8 0.8899999856948853 2843 5175 8007 HBL1_DMSO_200M_050219_1,8020 HBL1_DMSO_200M_050219_1,8020,TVSQRPQMGK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8021 42.39 343.0 307050.0 25 0 32262.0 -1 0 125 551.2104908894461 550.203214422846 1 551.2100707888603 MULTI CID FTMS 0 0 0 8007 148967.703125 0.7484242865466217 2 -0.2219429016113281 14 3 [YG]AE 4 -1 26.198 0.0 0.0 4.7615 0.0 0.0 0.0 127.01645229809914 127.01645229809914 4.828735836087539 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YG]AE 4.7615 - 159 1 1.662 85902.7 1.0 2844 5175 8007 HBL1_DMSO_200M_050219_1,8021 HBL1_DMSO_200M_050219_1,8021, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8022 42.394 225.0 549230.0 25 0 32702.0 + 9973 FPHDTTANV 9 147 501.2378462340837 1000.4611395349674 2 501.2384826540947 MULTI CID FTMS 0 0 0 8007 130972.203125 0.4287719684851193 -2 0.1895713806152343 15 Unmodified _FPHDTTANV_ ENSG00000139618|ENST00000380152|BRCA2 30.63653989081413 0.1413794767160703 3 PNST[KQ]NV 8 5 34.576 0.0 0.0 3.456 0.0 0.0 114.01149666613932 0.0 114.01149666613932 0.0 19.6277502416482 0.0 0.0 0 0.7059771852360797 0.0 0.0 1.079689690656103 PNST[KQ]NV 3.456 - 1328 + 1 1.662 94241.1 1.0 2845 5175 8007 HBL1_DMSO_200M_050219_1,8022 HBL1_DMSO_200M_050219_1,8022,FPHDTTANV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8023 42.398 202.0 536210.0 25 0 36123.0 + -1 HPDAPMSQV 9 142 489.7356837106689 977.456814488138 2 490.7402221560478 MULTI CID FTMS 0 0 0 8007 108060.515625 0.1851410347635714 -4 0.3544845581054687 16 Carbamidomethyl (C) _TVTVRENC(Carbamidomethyl (C))_ ENSG00000123562|ENST00000441076|MORF4L2;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;ENST00000560710.1_1_15:79184565-79186592:+|nuORF 13.50788311687929 0.7113601687236069 3 AVSPV 5 -1 21.252 0.0 0.0 2.1742 0.0 0.0 506.1894887732013 0.0 506.1894887732013 0.0 8.93273655296431 0.0 0.0 0 0.0 0.0 0.6382104921644451 0.0 AVSPV 2.1742 - 479 + 1 1.662 87694.6 1.0 2846 5175 8007 HBL1_DMSO_200M_050219_1,8023 HBL1_DMSO_200M_050219_1,8023,TVTVRENC False False HPDAPMSQV 42.39804 490.740222156048 512137.5 8007.0 ENSG00000123562|ENST00000441076|MORF4L2;;nc|ENSG00000185787|Q9UBU8-3|MORF4L1;;ENSG00000185787|ENST00000426013|MORF4L1;;nc|ENSG00000185787|Q9UBU8|MORF4L1;;ENST00000560710.1_1_15:79184565-79186592:+|nuORF 2.9200005531311035 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8024 42.413 800.0 148120.0 25 0 10227.0 + -1 MMDTVMWATV 10 155 608.7565396585948 1215.4985263839894 2 608.7576782107353 MULTI CID FTMS 0 0 0 8007 109056.2109375 1.0 0 0.0 17 2 Oxidation (M) _M(Oxidation (M))MDTVM(Oxidation (M))WATV_ REV__ENSG00000139173|ENST00000266534|TMEM117 10.823927491677226 0.6659270209832991 3 V[HM]VC(Carbamidomethyl (C))TV 7 -1 32.721 0.0 0.0 2.692 0.0 0.0 371.1145303298628 0.0 371.1145303298628 0.0 22.263582385535088 0.0 0.0 0 0.4247425010840047 0.0 0.6747425010840047 0.0 V[HM]VC(Carbamidomethyl (C))TV 2.692 - 561 + 1 1.662 88695.5 0.7699999809265137 2847 5175 8007 HBL1_DMSO_200M_050219_1,8024 HBL1_DMSO_200M_050219_1,8024,MMDTVMWATV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8026 42.418 67.0 940520.0 25 0 182300.0 + 5053 DGYEQAARV 9 87 504.7406236745259 1007.466694415852 2 504.7406494021416 MULTI CID FTMS 0 0 0 8025 717775.0 0.1150453477658458 14 -1.15753173828125 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 41.8396318013385 0.0653578398400075 3 [DG]YEQAA[RV] 9 0 [DG]Y + + 37.572 9.1542 2.7317 3.7293 3.7293 51.799 0.0 0.0 0.0 0.0 16.897489324369047 0.0 0.0 0 0.7134679910804405 0.0 0.4247425010840047 0.5554621874040891 + + [DG]YEQAA[RV] 3.7293 + + 134 + 1 1.657 53768.2 1.0 2848 5176 8025 HBL1_DMSO_200M_050219_1,8026 HBL1_DMSO_200M_050219_1,8026,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8027 42.424 351.0 418380.0 25 0 62996.0 32671 SDDCSSSE 8 134 415.12832256419534 828.2420921951907 2 415.1278869509697 MULTI CID FTMS 0 0 0 8025 218635.5625 0.4286199930049362 2 -0.2186164855957031 2 Unmodified _SDDCSSSE_ ENSG00000250423|ENST00000691062|KIAA1210;nc|ENSG00000250423|Q9ULL0|KIAA1210 2.577480529830294 0.808687252328423 3 P 1 8 9.7539 0.0 0.0 1.1777 0.0 0.0 713.1786212863025 0.0 713.1786212863025 0.0 0.2899597348884342 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.1777 - 48 + 1 1.657 117398.3 1.0 2849 5176 8025 HBL1_DMSO_200M_050219_1,8027 HBL1_DMSO_200M_050219_1,8027,SDDCSSSE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8028 42.425 12.0 5135200.0 25 0 329900.0 + 2670 ATDPTIHTV 9 77 477.7481638411996 953.4817747491992 2 477.7486144900322 MULTI CID FTMS 0 0 0 8025 4863030.5 0.2994283681693447 -1 0.0782279968261718 3 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 92.8221339359638 0.0138398038803217 3 [TA]DPT{I|L}HTV 9 0 + 79.491 0.0 0.0 8.337 8.337 97.558 0.0 0.0 0.0 53.62781577388333 12.98332479720628 12.98332479720628 39.82174506992261 0 0.7302046884880937 1.6989700043360187 1.5356668758921828 0.0 + + [TA]DPT{I|L}HTV;[DP]KKTPD[PG];[DP]TKKPD[PG];[TA]{[ET]|[MV]}[VP]HTV;{[ES]|[DT]|[{I|L}C]}PKKPD[PG];[PS]EKKPD[PG];[TA]{[ET]|[MV]}T{I|L}[YR];[TA]{[DS]|[MA]|[CV]|TT}E{I|L}[YR];[TA]{[ET]|[MV]}KK[YN];[HT]{I|L}P[W{M(Oxidation (M))|F}][PG] 8.337;4.1605;3.8656;3.6347;3.0333;2.8602;2.6114;2.2957;1.3594;1.33 +;-;-;-;-;-;-;-;-;- + 430 + 1 1.657 52738.6 1.0 2850 5176 8025 HBL1_DMSO_200M_050219_1,8028 HBL1_DMSO_200M_050219_1,8028,ATDPTIHTV True True ATDPTIHTV 42.425062 477.748614490032 171835680.0 8025.0 nc|ENSG00000086848|Q9H6U8|ALG9;;ENSG00000086848|ENST00000616540|ALG9;;nc|ENSG00000086848|Q9H6U8-2|ALG9;;nc|ENSG00000086848|Q9H6U8-4|ALG9 8.075314044952393 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8029 42.426 16.0 5207900.0 25 0 1006100.0 + 43009 VVYGGKSTI 9 84 462.2633370071416 922.5121210810833 2 462.2635681033134 MULTI CID FTMS 0 0 0 8025 3811230.25 0.0748550509985268 -1 0.0782279968261718 4 Unmodified _VVYGGKSTI_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54631532-54634860:+|nuORF 22.736283301280096 0.2418982879461534 3 VVYRYGGG 8 6 52.841 0.0 0.0 5.728 0.0 0.0 0.0 68.05140100650624 68.05140100650624 30.093728280886936 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VVYRYGGG 5.728 - 495 + 1 1.657 68749.3 1.0 2851 5176 8025 HBL1_DMSO_200M_050219_1,8029 HBL1_DMSO_200M_050219_1,8029,VVYGGKSTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8030 42.428 81.0 1342400.0 25 0 106460.0 + 13051 HAVYRDDLKKL 11 84 340.1951688248205 1356.751569432882 4 340.1950561404228 MULTI CID FTMS 0 0 0 8025 620398.6875 1.0 0 0.0 5 Unmodified _HAVYRDDLKKL_ ENSG00000143546|ENST00000368733|S100A8 15.538449434065043 0.7119291465483839 3 [HA]M[HK]DH{I|L}KK{I|L} 11 4 [HA]M[HK]DH + + 23.59 19.174 2.2389 1.7387 1.7387 48.665 0.0 0.0 0.0 0.0 3.044098131312253 0.0 0.0 0 0.5 0.0 0.0 0.2215141619232908 [HA]M[HK]DH{I|L}KK{I|L} 1.7387 - 130 + 1 1.657 94270.2 1.0 2852 5176 8025 HBL1_DMSO_200M_050219_1,8030 HBL1_DMSO_200M_050219_1,8030,HAVYRDDLKKL False True HAVYRDDLKKL 42.428064 340.195056140423 4847022.5 8025.0 ENSG00000143546|ENST00000368733|S100A8 3.3430095513661704 4.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8031 42.43 106.0 835950.0 25 0 94330.0 + -1 MLQYVRSQA 9 85 556.2800086822174 1110.545464431235 2 556.2805053591728 MULTI CID FTMS 0 0 0 8025 500875.0625 0.4361240516452661 -1 0.0782279968261718 6 Oxidation (M) _M(Oxidation (M))LQYVRSQA_ REV__ENSG00000150681|ENST00000367460|RGS18 15.847184025352805 0.4077185912009129 3 [QP]YYNS 6 -1 38.333 0.0 0.0 3.4517 0.0 0.0 0.0 355.21027551822505 355.21027551822505 15.400990676322904 0.0 0.0 0.0 0 0.0 0.0 0.0 1.2302046884880935 [QP]YYNS 3.4517 - 105 + 1 1.657 73778.3 1.0 2853 5176 8025 HBL1_DMSO_200M_050219_1,8031 HBL1_DMSO_200M_050219_1,8031,MLQYVRSQA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8032 42.432 62.0 961790.0 25 0 87642.0 + 36292 SYIGSHREL 9 76 531.2674682531832 0 531.2721435427666 PEAK CID FTMS 0 0 0 8025 484235.4375 1.0 0 0.0 7 Unmodified _SYIGFKSYP_ nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91|EP400;nc|ENSG00000183495|Q96L91-5|EP400;ENSG00000183495|ENST00000389561|EP400 17.11289562659939 0.230679707888486 3 {I|L}GSH 4 6 14.655 0.0 0.0 1.3818 0.0 0.0 250.08537927195204 413.21531091861567 663.3006901905677 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {I|L}GSH 1.3818 - 128 + 1 1.657 52414.3 1.0 2854 5176 8025 HBL1_DMSO_200M_050219_1,8032 HBL1_DMSO_200M_050219_1,8032,SYIGFKSYP False False SYIGSHREL 42.431867 531.272143542767 3079092.25 8025.0 nc|ENSG00000183495|Q96L91-4|EP400;;nc|ENSG00000183495|Q96L91-3|EP400;;nc|ENSG00000183495|Q96L91|EP400;;nc|ENSG00000183495|Q96L91-5|EP400;;ENSG00000183495|ENST00000389561|EP400 5.160914580027263 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8033 42.434 114.0 714670.0 25 0 62973.0 + -1 NTCWWYDL 8 89 579.2387167471795 1156.462880561159 2 579.2394897341728 MULTI CID FTMS 0 0 0 8025 492068.28125 0.7031126367316086 2 -0.2186164855957031 8 Carbamidomethyl (C) _NTC(Carbamidomethyl (C))WWYDL_ REV__ENSG00000173137|ENST00000308860|ADCK5;REV__ENST00000532190.2_1_8:145615874-145615982:+|nuORF 19.438996006549623 0.6237395211498085 3 {[QS]|[NT]}PS 4 -1 34.45 0.0 0.0 2.979 0.0 0.0 0.0 754.2662447565061 754.2662447565061 23.21333751784365 0.0 0.0 0.0 0 0.5 1.0 0.3252574989159953 0.0 {[QS]|[NT]}PS 2.979 - 58 + 1 1.657 68948.2 1.0 2855 5176 8025 HBL1_DMSO_200M_050219_1,8033 HBL1_DMSO_200M_050219_1,8033,NTCWWYDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8034 42.436 88.0 761520.0 25 0 59662.0 + + 23935 LPNSTERAI 9 92 500.27680301956775 998.5390531059356 2 500.7758666872978 MULTI CID FTMS 0 0 0 8025 467286.90625 0.5939521366090061 -2 0.1619911193847656 9 Unmodified _LVQQDLANV_ nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENST00000547987.2_1_12:53854819-53861193:+|nuORF;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000197111|Q15366-7|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 11.640296217721598 0.521594087909532 3 [{I|L}V]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TSNP 8 -1 42.145 0.0 0.0 4.2207 0.0 0.0 0.0 109.06417980164318 109.06417980164318 29.046153208173777 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.805462187404089 [{I|L}V]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TSNP 4.2207 - 237 1 1.657 56799.2 1.0 2856 5176 8025 HBL1_DMSO_200M_050219_1,8034 HBL1_DMSO_200M_050219_1,8034,LVQQDLANV False False LPNSTERAI 42.436208 500.775866687298 3549702.5 8025.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;ENST00000547987.2_1_12:53854819-53861193:+|nuORF;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000197111|Q15366-7|PCBP2;;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 4.30755885442098 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8035 42.439 116.0 469560.0 25 0 76850.0 + 34534 SPAPPPPAV 9 83 416.7323482089888 831.4501434847776 2 416.7314941287041 MULTI CID FTMS 0 0 0 8025 304229.96875 0.6346241423111879 -1 0.0782279968261718 10 Unmodified _SPAPPPPAV_ ENSG00000116604|ENST00000348159|MEF2D;nc|ENSG00000116604|Q14814-2|MEF2D;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D;nc|ENSG00000116604|Q14814-6|MEF2D 42.09456458481378 0.0639583784996157 3 [PA]SPPP 6 4 37.296 0.0 0.0 4.4856 0.0 0.0 0.0 282.1462149531092 282.1462149531092 22.368904078328487 0.0 0.0 0.0 0 0.8807196863200843 0.8860566476931632 0.3252574989159953 0.0 [PA]SPPP 4.4856 - 171 1 1.657 47206.1 1.0 2857 5176 8025 HBL1_DMSO_200M_050219_1,8035 HBL1_DMSO_200M_050219_1,8035,SPAPPPPAV True True SPAPPPPAV 42.438627 416.731494128704 9903641.0 8025.0 nc|ENSG00000116604|Q14814-4|MEF2D;;ENSG00000116604|ENST00000348159|MEF2D;;nc|ENSG00000116604|Q14814-6|MEF2D;;nc|ENSG00000116604|Q14814-3|MEF2D;;nc|ENSG00000116604|Q14814-5|MEF2D;;nc|ENSG00000116604|Q14814-2|MEF2D 4.775328874588013 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8036 42.444 309.0 305120.0 25 0 32816.0 + 28408 PSRPYSPSV 9 106 495.2558426810531 988.4971324289062 2 495.2558776736259 MULTI CID FTMS 0 0 0 8025 267695.53125 1.0 0 0.0 11 Unmodified _PSRPYSPSV_ REV__ENST00000560412.1_1_19:8274518-8274677:+|nuORF 30.63653989081413 0.1413794767160703 3 {I|L}PS[RH]PPS 8 -1 46.766 0.0 0.0 4.731 0.0 0.0 0.0 114.05661188297108 114.05661188297108 28.74639860510714 0.0 0.0 0.0 0 0.9247425010840048 1.0969100130080565 0.5709991640913001 0.0 {I|L}PS[RH]PPS 4.731 - 587 + 1 1.657 75844.5 1.0 2858 5176 8025 HBL1_DMSO_200M_050219_1,8036 HBL1_DMSO_200M_050219_1,8036,PSRPYSPSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8037 42.451 351.0 584370.0 25 0 33866.0 + 4531 DAYPKNPHL 9 190 352.18252613856373 1053.5257490158913 3 352.1828491091728 MULTI CID FTMS 0 0 0 8025 248074.828125 0.1981243191530823 -2 0.1619911193847656 12 Unmodified _DAYPKNPHL_ ENSG00000099940|ENST00000215730|SNAP29 42.09456458481378 0.0639583784996157 3 {[DA]|[EG]}YPKNPH{I|L} 9 0 + 60.372 0.0 0.0 5.7305 5.7305 82.311 0.0 0.0 0.0 48.778128284054105 4.345420668421305 4.345420668421305 4.771212547196626 0 0.3494850021680094 1.6989700043360187 0.0 0.3054621874040891 + + {[DA]|[EG]}YPKNPH{I|L};{[DA]|[EG]}YPKKW{M(Oxidation (M))|F};{[DA]|[EG]}YPKNP{I|L}H;{[DA]|[EG]}YPKGGPH{I|L};{[DA]|[EG]}YPKGGP{I|L}H;WY{I|L}[EP]PH{I|L};WYPK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SV;WY{I|L}[EP]P{I|L}H 5.7305;5.2776;5.126;4.5665;3.962;3.236;3.0143;2.6315 +;-;-;-;-;-;-;- + 233 + 1 1.657 164640.6 1.0 2859 5176 8025 HBL1_DMSO_200M_050219_1,8037 HBL1_DMSO_200M_050219_1,8037,DAYPKNPHL True True DAYPKNPHL 42.450585 352.182849109173 22390632.0 8025.0 ENSG00000099940|ENST00000215730|SNAP29 8.459323088328043 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8038 42.464 784.0 235770.0 25 0 21538.0 + 25441 NEGRSSVACIQ 11 168 582.275197620095 1162.53584230699 2 582.2755004763603 MULTI CID FTMS 0 0 0 8025 212658.703125 0.2688842904476332 -1 0.0782279968261718 13 Unmodified _NEGRSSVACIQ_ REV__ENST00000547005.5_1_12:108959188-108962689:+|nuORF 47.594388314883695 0.1309523012099263 3 [WQ]EQQG{M(Oxidation (M))|F}{I|L}Q 9 -1 + 41.946 0.0 0.0 3.6081 3.6081 68.692 0.0 0.0 0.0 0.3875258899201554 2.9127015837482446 0.3875258899201554 0.3875258899201554 0 1.0 0.0 0.0 0.9604093769761874 [WQ]EQQG{M(Oxidation (M))|F}{I|L}Q;[AG]WEQQG{M(Oxidation (M))|F}{I|L}Q;[WQ]NRDG{M(Oxidation (M))|F}{I|L}Q;[AG]WNRDG{M(Oxidation (M))|F}{I|L}Q;{[DA]|[EG]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QQG{M(Oxidation (M))|F}{I|L}Q;[AG][RD]{[WN]|[YH]}G{M(Oxidation (M))|F}{I|L}Q;{[CA]|SS}NW{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}NAD{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;[AG][RD]{[QG]|[NA]}DG{M(Oxidation (M))|F}{I|L}Q;{[CA]|SS}{I|L}{[WN]|[YH]}[C(Carbamidomethyl (C))R]{I|L}Q 3.6081;3.5748;3.5597;3.5264;3.4728;3.384;3.3576;3.3182;3.1288;2.9955 -;-;-;-;-;-;-;-;-;- 1010 1 1.657 141790.6 1.0 2860 5176 8025 HBL1_DMSO_200M_050219_1,8038 HBL1_DMSO_200M_050219_1,8038,NEGRSSVACIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8039 42.478 785.0 393100.0 25 0 37607.0 + 5294 DLCDGDDNFM 10 215 572.7009728405341 1143.387392747868 2 572.7022582888603 MULTI CID FTMS 0 0 0 8025 220420.6875 0.9332609319534202 1 -0.1437149047851562 14 Unmodified _DLCDGDDNFM_ REV__ENSG00000166024|ENST00000298999|R3HCC1L;REV__nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L;REV__nc|ENSG00000166024|Q7Z5L2|R3HCC1L 13.90604991867851 0.6142120002215601 3 [YG]G 3 -1 21.796 0.0 0.0 1.9062 0.0 0.0 0.0 863.257240730543 863.257240730543 8.300756084811809 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YG]G 1.9062 - 1934 1 1.657 223245.8 1.0 2861 5176 8025 HBL1_DMSO_200M_050219_1,8039 HBL1_DMSO_200M_050219_1,8039,DLCDGDDNFM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8040 42.492 800.0 170260.0 25 0 25806.0 + -1 TPSLQPSLLMM 11 147 617.3141062305234 0 617.3138915896416 PEAK CID FTMS 0 0 0 8025 172570.921875 0.9011873159098144 1 -0.1437149047851562 15 Oxidation (M) _TPSLQPSLLM(Oxidation (M))M_ REV__ENST00000371221.3_1_10:97392751-97393321:-|nuORF;REV__ENST00000371224.6_1_10:97393249-97393321:-|nuORF 24.020572477871973 0.3025672323349825 3 {I|L}REA{I|L}SP 7 -1 19.243 0.0 0.0 1.5612 0.0 0.0 365.1425424397592 98.02540765933828 463.1679500990975 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0356668758921828 0.0 {I|L}REA{I|L}SP 1.5612 - 260 + 1 1.657 103106.9 0.9399999976158142 2862 5176 8025 HBL1_DMSO_200M_050219_1,8040 HBL1_DMSO_200M_050219_1,8040,TPSLQPSLLMM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8041 42.507 800.0 281430.0 25 0 29858.0 + 45972 YYYYHRQY 8 124 628.280653423105 1254.54675391301 2 628.2819091677666 MULTI CID FTMS 0 0 0 8025 162958.8125 0.7783899213031893 -1 0.0782279968261718 16 Unmodified _YYYYHRQY_ ENSG00000140990|ENST00000268668|NDUFB10;ENST00000565031.1_1_16:2009625-2011290:+|nuORF;nc|ENSG00000140990|O96000-2|NDUFB10 74.39630413441286 0.1057069479668299 3 YYYYHRYQ 8 2 + 78.389 0.0 0.0 6.2484 6.2484 83.335 0.0 0.0 0.0 32.45645105456938 4.292907555361225 4.292907555361225 4.292907555361225 0 0.9929928190999392 2.0 0.0 1.2753187046026266 YYYYHRYQ;YYYYHRHGP;YYYHYRYQ;YYY{[QD]|[EN]|[WG]|[KD]|[RS]}GRYQ;YYYHYRHGP;YYY{[QD]|[EN]|[WG]|[KD]|[RS]}GRHGP;YYY{[QD]|[EN]|[WG]|[KD]|[RS]}[Y{I|L}]MP 6.2484;5.9062;5.4477;5.3515;5.1056;5.0136;4.3304 -;-;-;-;-;-;- 562 + 1 1.657 168871.5 0.949999988079071 2863 5176 8025 HBL1_DMSO_200M_050219_1,8041 HBL1_DMSO_200M_050219_1,8041,YYYYHRQY True True YYYYHRQY 42.506862 628.281909167767 1646931.25 8025.0 nc|ENSG00000140990|O96000-2|NDUFB10;;ENST00000565031.1_1_16:2009625-2011290:+|nuORF;;ENSG00000140990|ENST00000268668|NDUFB10 5.944866975148519 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8042 42.514 411.0 262600.0 25 0 14197.0 + 38304 TQIDAQNKL 9 150 515.7780254318202 1029.5414979304403 2 515.7789794802666 MULTI CID FTMS 0 0 0 8025 167004.375 1.0 0 0.0 17 Unmodified _TQIDAQNKL_ ENSG00000177879|ENST00000316788|AP3S1 31.26834338654808 0.1333407332142048 3 N[QA]D{I|L}[NP] 7 6 32.848 0.0 0.0 3.1905 0.0 0.0 259.19014174629064 0.0 259.19014174629064 0.0 18.133096816673486 0.0 0.0 0 0.8494850021680094 0.0 0.0 1.0356668758921828 N[QA]D{I|L}[NP] 3.1905 - 752 1 1.657 85717.6 1.0 2864 5176 8025 HBL1_DMSO_200M_050219_1,8042 HBL1_DMSO_200M_050219_1,8042,TQIDAQNKL False True TQIDAQNKL 42.514212 515.778979480267 1212462.0 8025.0 ENSG00000177879|ENST00000316788|AP3S1 5.475011984507243 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8043 42.528 800.0 162950.0 25 0 9206.1 + 289 ADPWATQPHSL 11 153 611.7969375953385 1221.5793222574769 2 611.7961303591728 MULTI CID FTMS 0 0 0 8025 154476.375 0.7794514386539476 -1 0.0782279968261718 18 Unmodified _ADPWATQPHSL_ REV__ENST00000427177.5_1_17:75495228-75495576:+|nuORF 12.240655878213236 0.7805268987462184 3 [HM][TA]DPT{I|L}HS{I|L} 11 -1 + 31.594 0.0 0.0 2.5863 2.5863 73.171 0.0 0.0 0.0 4.418954370983009 4.418954370983009 4.418954370983009 4.418954370983009 0 0.4247425010840047 0.0 1.7416440611282626 0.0 [HM][TA]DPT{I|L}HS{I|L};[TA]A[KP]TPD[TA]{[{M(Oxidation (M))|F}C]|[YS]};[HM][TA]GQQ{I|L}HS{I|L};[TA]DHRH[HV]{[{M(Oxidation (M))|F}C]|[YS]};VV[RN]TPD[TA]{[{M(Oxidation (M))|F}C]|[YS]};[TA]A[KP]TPD[PG][HM];[AG]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TPD[TA]{[{M(Oxidation (M))|F}C]|[YS]};[DP]KKTPD[TA]{[{M(Oxidation (M))|F}C]|[YS]};[HM][TA]DPT[KP]AGP;[HM][QT]QQ{I|L}HS{I|L} 2.5863;2.2246;1.8387;1.6906;1.6811;1.2828;1.2499;1.086;1.0796;1.0341 -;-;-;-;-;-;-;-;-;- 865 + 1 1.657 97276.7 0.9100000262260436 2865 5176 8025 HBL1_DMSO_200M_050219_1,8043 HBL1_DMSO_200M_050219_1,8043,ADPWATQPHSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8044 42.543 800.0 296970.0 25 0 16889.0 + 26168 NQDDLTHKL 9 210 542.2749852821419 1082.5354176310836 2 542.2770263552666 MULTI CID FTMS 0 0 0 8025 149504.515625 0.7232330777226073 -2 0.1619911193847656 19 Unmodified _NQDDLTHKL_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928-2|POLR2A;nc|ENSG00000181222|P24928|POLR2A 41.95555342248728 0.0647214845423414 3 {[QN]|[E{I|L}]|[KN]}DD{I|L}THK{I|L} 9 0 + 44.673 0.0 0.0 4.1267 4.1267 75.056 0.0 0.0 0.0 7.147642715192504 3.2147829626473907 3.2147829626473907 3.2147829626473907 0 0.6747425010840047 0.0 0.6747425010840047 0.1505149978319906 + + {[QN]|[E{I|L}]|[KN]}DD{I|L}THK{I|L};{[QN]|[E{I|L}]|[KN]}DD{I|L}TH{I|L}K;{[QN]|[E{I|L}]|[KN]}DD{I|L}T[K{I|L}]H;GGV[RK]{I|L}DDSH;ME{[HG]|PP}MTHK{I|L};M[WH]MTHK{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[H{I|L}]G[{I|L}A]DSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[H{I|L}][K{I|L}]DSH;ME{[HG]|PP}MTH{I|L}K;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}DDSH 4.1267;3.8297;2.5039;2.1981;2.1083;1.9141;1.8923;1.845;1.8113;1.7371 +;-;-;-;-;-;-;-;-;- + 1943 + 1 1.657 179124.7 0.8899999856948853 2866 5176 8025 HBL1_DMSO_200M_050219_1,8044 HBL1_DMSO_200M_050219_1,8044,NQDDLTHKL True True NQDDLTHKL 42.543056 542.277026355267 1231109.0 8025.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A;;nc|ENSG00000181222|P24928-2|POLR2A 6.125617980957031 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8045 42.557 800.0 201180.0 25 0 56914.0 -1 0 55 1142.7974855118243 0 1142.797778308392 PEAK CID FTMS 0 0 0 8025 102607.234375 1.0 0 0.0 20 3 YG 2 -1 9.464 0.0 0.0 0.41443 0.0 0.0 641.8390373304863 1418.6570754616175 2060.496112792104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.41443 - 11 + 1 1.657 117391.6 0.5600000023841858 2867 5176 8025 HBL1_DMSO_200M_050219_1,8045 HBL1_DMSO_200M_050219_1,8045, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8047 42.561 18.0 1550800.0 25 0 170420.0 + -1 GYGGGYGGQSSM 12 56 560.7214550218333 1119.4283571104663 2 560.7220336794853 MULTI CID FTMS 0 0 0 8046 2944071.25 0.3641043873393184 1 -0.0749015808105468 1 Oxidation (M) _QYRSM(Oxidation (M))DSSM_ ENST00000515481.5_1_5:179043097-179043181:-|nuORF;ENSG00000126945|ENST00000316594|HNRNPH2;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 7.910154910731844 0.6385446671287552 3 [YG]G 3 -1 22.676 0.0 0.0 2.0257 0.0 0.0 0.0 839.2989680325946 839.2989680325946 3.608018480247779 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YG]G 2.0257 - 113 1 1.657 25876.3 1.0 2868 5177 8046 HBL1_DMSO_200M_050219_1,8047 HBL1_DMSO_200M_050219_1,8047,QYRSMDSSM False False GYGGGYGGQSSM 42.561064 560.722033679485 103690624.0 8046.0 ENST00000515481.5_1_5:179043097-179043181:-|nuORF;;ENSG00000126945|ENST00000316594|HNRNPH2;;ENSG00000169045|ENST00000393432|HNRNPH1;;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 5.465835730234782 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8048 42.572 628.0 716700.0 25 0 34358.0 -1 0 117 1115.1629266664377 5570.7782509991885 5 1115.767260730267 MULTI CID FTMS 0 0 0 8046 568448.25 0.7788300609531107 -4 0.4115142822265625 2 3 PGQPN[QA]TAASP 12 -1 72.31 0.0 0.0 1.298 0.0 0.0 3594.833806956959 853.4111422174436 4448.244949174403 0.0 0.0 0.0 0.0 0 2.9247425010840047 0.0 0.0 1.2302046884880935 PGQPN[QA]TAASP 1.298 - 5742 + 1 1.657 273655.3 1.0 2869 5177 8046 HBL1_DMSO_200M_050219_1,8048 HBL1_DMSO_200M_050219_1,8048, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8049 42.573 6.3 10683000.0 25 0 1475300.0 -1 LCVQKLRIL 9 72 381.5740224073071 1141.7002378221214 3 381.5740539431572 MULTI CID FTMS 0 0 0 8046 8616698.0 0.2427735088614168 -2 0.2219429016113281 3 Carbamidomethyl (C) _LC(Carbamidomethyl (C))VQKLRIL_ ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1 4.897010918128616 0.7437319958283661 3 {M(Oxidation (M))|F}[QP]K{I|L}K[R{I|L}]{I|L} 9 -1 + 31.47 0.0 0.0 2.7564 2.7564 79.448 0.0 0.0 0.0 19.687586472142748 3.0539480106643104 3.0539480106643104 10.04432191740108 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[QP]K{I|L}K[R{I|L}]{I|L};[PG]A{M(Oxidation (M))|F}K{I|L}K[R{I|L}]{I|L} 2.7564;1.8767 -;- 38 + 1 1.657 62170.6 1.0 2870 5177 8046 HBL1_DMSO_200M_050219_1,8049 HBL1_DMSO_200M_050219_1,8049,LCVQKLRIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8050 42.574 23.0 2666700.0 25 0 416120.0 + 22586 LPYDSKHQI 9 103 367.5296169275622 1099.5670213828869 3 367.5293456912041 MULTI CID FTMS 0 0 0 8046 1992451.25 0.1905164244953223 -2 0.2219429016113281 4 Unmodified _LPYDSKHQI_ ENSG00000134242|ENST00000359785|PTPN22;ENST00000484147.5_1_1:114375712-114414257:-|nuORF;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;nc|ENSG00000134242|Q9Y2R2-6|PTPN22;nc|ENSG00000134242|Q9Y2R2|PTPN22 24.99096001346401 0.2132109383330889 3 {I|L}PYDSKH{I|L}Q 9 2 + 63.642 0.0 0.0 5.7879 5.7879 78.438 0.0 0.0 0.0 27.230297512182773 13.213640725659296 13.213640725659296 2.01575314277536 0 0.0 1.154901959985743 0.0 0.868415180652539 {I|L}PYDSKH{I|L}Q;{I|L}PYDSK{I|L}HQ;{I|L}{I|L}{M(Oxidation (M))|F}DSKH{I|L}Q;{I|L}PYD{I|L}[KS]HQ;{I|L}{I|L}{M(Oxidation (M))|F}DSK{I|L}HQ;{I|L}{I|L}{M(Oxidation (M))|F}D{I|L}[KS]HQ;{I|L}PY[{M(Oxidation (M))|F}V][W{I|L}]Y 5.7879;5.6046;4.81;4.701;4.6267;3.7232;2.8661 -;-;-;-;-;-;- 456 + 1 1.657 56356.5 1.0 2871 5177 8046 HBL1_DMSO_200M_050219_1,8050 HBL1_DMSO_200M_050219_1,8050,LPYDSKHQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8051 42.576 39.0 1359100.0 25 0 114290.0 + 22655 LPYRDSTQV 9 75 539.7801698219005 1077.5457867106009 2 539.7803222537041 MULTI CID FTMS 0 0 0 8046 1787022.625 0.3980938574026698 -2 0.2219429016113281 5 Unmodified _LPYRDSTQV_ ENSG00000134508|ENST00000256925|CABLES1;nc|ENSG00000134508|Q8TDN4-2|CABLES1;nc|ENSG00000134508|Q8TDN4-4|CABLES1 39.94969957227396 0.0757326808254658 3 {I|L}PM 3 7 41.471 0.0 0.0 3.8487 0.0 0.0 0.0 733.3291270884853 733.3291270884853 16.535984316004217 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 {I|L}PM 3.8487 - 66 + 1 1.657 49254.3 1.0 2872 5177 8046 HBL1_DMSO_200M_050219_1,8051 HBL1_DMSO_200M_050219_1,8051,LPYRDSTQV True True LPYRDSTQV 42.575589 539.780322253704 64683504.0 8046.0 nc|ENSG00000134508|Q8TDN4-2|CABLES1;;ENSG00000134508|ENST00000256925|CABLES1;;nc|ENSG00000134508|Q8TDN4-4|CABLES1 6.081029256184896 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8052 42.577 40.0 1711400.0 25 0 170950.0 + 22587 LPYDSKHQI 9 86 550.7903146224328 1099.5660763116657 2 550.7906982302666 MULTI CID FTMS 0 0 0 8046 1135313.375 0.1891269958739216 -2 0.2219429016113281 6 Unmodified _LPYDSKHQI_ ENSG00000134242|ENST00000359785|PTPN22;ENST00000484147.5_1_1:114375712-114414257:-|nuORF;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;nc|ENSG00000134242|Q9Y2R2-6|PTPN22;nc|ENSG00000134242|Q9Y2R2|PTPN22 39.94969957227396 0.0757326808254658 3 {I|L}PYD[KS]H{I|L}Q 9 2 + 66.099 0.0 0.0 6.0113 6.0113 90.501 0.0 0.0 0.0 33.131455692823835 3.882353118286233 3.882353118286233 18.239087409443187 0 0.7059771852360797 1.5228787452803376 0.0 1.1237125054200234 {I|L}PYD[KS]H{I|L}Q;{I|L}{I|L}{M(Oxidation (M))|F}D[KS]H{I|L}Q;{I|L}PN[KG][KS]DNQ;{I|L}PW{I|L}[KS]DNQ;{I|L}{I|L}[DP][C(Carbamidomethyl (C))K]N{I|L}Q;{I|L}{I|L}[DP][C(Carbamidomethyl (C))K]{I|L}NQ;{I|L}{I|L}[WP][KS]DNQ;{I|L}{I|L}{[QN]|[E{I|L}]|[KN]}[KQ]DNQ 6.0113;4.3526;4.2684;3.6859;2.6056;2.4014;1.6693;1.6693 -;-;-;-;-;-;-;- 592 + 1 1.657 57693.8 1.0 2873 5177 8046 HBL1_DMSO_200M_050219_1,8052 HBL1_DMSO_200M_050219_1,8052,LPYDSKHQI True True LPYDSKHQI 42.576766 550.790698230267 93252128.0 8046.0 ENSG00000134242|ENST00000359785|PTPN22;;nc|ENSG00000134242|Q9Y2R2-6|PTPN22;;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;;nc|ENSG00000134242|Q9Y2R2|PTPN22;;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;;ENST00000484147.5_1_1:114375712-114414257:-|nuORF 5.033236821492513 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8053 42.578 59.0 903690.0 25 0 240590.0 + 38162 TPPTAQVV 8 81 406.729270483487 811.4439880337741 2 406.7292053103447 MULTI CID FTMS 0 0 0 8046 1091099.5 0.3271415228038599 -3 0.3057060241699219 7 Unmodified _TPPTAQVV_ ENSG00000116489|ENST00000263168|CAPZA1;ENST00000466066.1_1_1:113202257-113212751:+|nuORF 46.92087301778293 0.1537303740847981 3 [TP]PATQVV 8 2 + 53.242 0.0 0.0 6.5614 6.5614 87.589 0.0 0.0 0.0 18.1437180047066 37.75752837077448 18.1437180047066 7.59729516507592 0 0.8182503180159344 1.3979400086720375 1.1237125054200234 0.0 [TP]PATQVV;[TP]PAQTVV;[TP]PAT[AG]VV;[TP]PQATVV;[TP]PAGATVV;[TP][QA]PTVV;[TP]PAQVTV;[TP]PQAVTV;[TP]PAGAVTV;[TP][QA]PVTV 6.5614;5.6251;5.42;5.4081;4.8917;3.9402;3.8975;3.6805;3.1641;2.2126 -;-;-;-;-;-;-;-;-;- 136 1 1.657 46336.6 1.0 2874 5177 8046 HBL1_DMSO_200M_050219_1,8053 HBL1_DMSO_200M_050219_1,8053,TPPTAQVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8054 42.58 63.0 1111000.0 25 0 123360.0 + 43159 VYQPKRSVL 9 84 363.8856480683672 1088.6351148053018 3 363.8852722048759 MULTI CID FTMS 0 0 0 8046 873782.1875 1.0 0 0.0 8 Unmodified _VYQPKRSVL_ ENSG00000119812|ENST00000238823|FAM98A;ENST00000474985.5_1_2:33809845-33813599:-|nuORF 10.823927491677226 0.5436922275383211 3 [YV]T 3 7 17.42 0.0 0.0 1.6002 0.0 0.0 0.0 722.433978901258 722.433978901258 6.000316507707403 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [YV]T 1.6002 - 43 1 1.657 65402.7 1.0 2875 5177 8046 HBL1_DMSO_200M_050219_1,8054 HBL1_DMSO_200M_050219_1,8054,VYQPKRSVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8055 42.581 75.0 586190.0 25 0 30461.0 + -1 MARLTWASHEKMH 13 85 404.1973427652416 1612.7602651945665 4 404.4479247927666 MULTI CID FTMS 0 0 0 8046 815868.375 1.0 0 0.0 9 Carbamidomethyl (C) _MWRLC(Carbamidomethyl (C))LVYYFY_ ENSG00000163220|ENST00000368738|S100A9 0.4545168274142398 0.8730034954726786 3 [HT]KEHSA 7 -1 31.177 0.0 0.0 1.9331 0.0 0.0 0.0 819.3647292076923 819.3647292076923 13.010299956639807 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3252574989159953 0.0 [HT]KEHSA 1.9331 - 104 1 1.657 46692.0 1.0 2876 5177 8046 HBL1_DMSO_200M_050219_1,8055 HBL1_DMSO_200M_050219_1,8055,MWRLCLVYYFY False False MARLTWASHEKMH 42.581497 404.1974 6784675.0 8046.0 ENSG00000163220|ENST00000368738|S100A9 0.5545726617177328 4.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8056 42.583 64.0 1077600.0 25 0 59022.0 3483 CILDFMCMS 9 90 531.7113876004645 1061.408222267729 2 531.7125121951103 MULTI CID FTMS 0 0 0 8046 786624.375 0.6755342097214957 -1 0.1437149047851562 10 Unmodified _CILDFMCMS_ ENST00000579991.2_1_17:56166640-56166793:+|nuORF 11.640296217721598 0.521594087909532 3 MS 2 7 21.211 0.0 0.0 1.9984 0.0 0.0 339.09013341768383 501.221694245829 840.3118276635129 0.0 0.0 0.0 0.0 0 0.5 0.0 0.6747425010840047 0.0 + MS 1.9984 + + 260 + 1 1.657 59578.5 1.0 2877 5177 8046 HBL1_DMSO_200M_050219_1,8056 HBL1_DMSO_200M_050219_1,8056,CILDFMCMS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8057 42.591 443.0 424360.0 25 0 102620.0 -1 0 46 1129.124633559678 3384.352071279234 3 1129.794482409954 MULTI CID FTMS 0 0 0 8046 750999.3125 0.5027511172164298 -2 0.2219429016113281 11 3 E 1 -1 6.9897 0.0 0.0 0.20653 0.0 0.0 2728.1234447396223 524.1633394830686 3252.286784222691 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20653 - 37 + 1 1.657 159708.4 1.0 2878 5177 8046 HBL1_DMSO_200M_050219_1,8057 HBL1_DMSO_200M_050219_1,8057, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8058 42.594 162.0 1177700.0 25 0 108990.0 + -1 MPKLGKARLI 10 124 571.8572817906318 1141.7000106480634 2 571.8578979372978 MULTI CID FTMS 0 0 0 8046 715246.6875 0.2462103355119735 -2 0.2219429016113281 12 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 25.399314129420983 0.3980215340001851 3 K{I|L}KQPE 6 -1 60.904 0.0 0.0 5.3345 0.0 0.0 400.28059053451966 0.0 400.28059053451966 0.0 47.805168975722765 0.0 0.0 0 1.25 0.0 0.0 0.4247425010840047 K{I|L}KQPE 5.3345 - 162 1 1.657 144645.1 1.0 2879 5177 8046 HBL1_DMSO_200M_050219_1,8058 HBL1_DMSO_200M_050219_1,8058,MPKLGKARLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8059 42.596 73.0 762190.0 25 0 67090.0 -1 CLLAFVFFDAN 11 87 658.8200127084536 1315.6254724837072 2 658.8202392458916 MULTI CID FTMS 0 0 0 8046 696077.8125 0.4927163900667163 -1 0.1437149047851562 13 Carbamidomethyl (C) _C(Carbamidomethyl (C))LLAFVFFDAN_ ENSG00000158941|ENST00000308511|CCAR2;ENST00000520536.1_1_8:22475798-22477192:+|nuORF;ENST00000521436.5_1_8:22474947-22476312:+|nuORF;nc|ENSG00000158941|Q8N163-2|CCAR2 26.268140514670165 0.4754186812857754 3 ASQ[PS][TA]VNVPN 12 -1 77.177 0.0 0.0 5.8662 0.0 0.0 132.0577977784322 0.0 132.0577977784322 0.0 61.96063146421345 0.0 0.0 0 0.9247425010840048 0.0 1.6989700043360187 0.6861818737241735 ASQ[PS][TA]VNVPN 5.8662 - 1041 + 1 1.657 46108.9 1.0 2880 5177 8046 HBL1_DMSO_200M_050219_1,8059 HBL1_DMSO_200M_050219_1,8059,CLLAFVFFDAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8060 42.598 100.0 1172600.0 25 0 62451.0 + 26601 NVPWTRTI 8 131 493.77244556917225 985.5303382051444 2 493.7725402712822 MULTI CID FTMS 0 0 0 8046 645679.0625 0.0149204111673644 -3 0.3057060241699219 14 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 48.345845343767074 0.1470278396477103 3 {[QN]|[E{I|L}]|[KN]}S[RP]GNT{I|L} 9 -1 + 69.949 0.0 0.0 7.0976 7.0976 89.016 0.0 0.0 0.0 7.447274948966935 13.766220822730418 7.447274948966935 7.447274948966935 0 1.274227503252014 1.5228787452803376 0.3054621874040891 1.385151878060192 {[QN]|[E{I|L}]|[KN]}S[RP]GNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GNT{I|L};{[QN]|[E{I|L}]|[KN]}S[RP]GGGT{I|L};{[QN]|[E{I|L}]|[KN]}SG[RP]NT{I|L};{[NV]|[RG]}R[NG]VNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GGGT{I|L};{[QN]|[E{I|L}]|[KN]}SG[RP]GGT{I|L};[YK][YK]GNT{I|L};[VP]S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VNT{I|L};{[NV]|[RG]}R[NG]VGGT{I|L} 7.0976;6.3419;6.1633;6.0784;5.6282;5.4076;5.1441;4.8079;4.7586;4.6939 -;-;-;-;-;-;-;-;-;- 2036 1 1.657 89609.3 1.0 2881 5177 8046 HBL1_DMSO_200M_050219_1,8060 HBL1_DMSO_200M_050219_1,8060,NVPWTRTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8061 42.6 73.0 623850.0 25 0 41854.0 -1 0 55 491.2878219710474 2451.402727522237 5 491.4883605837822 MULTI CID FTMS 0 0 0 8046 643468.875 1.0 0 0.0 15 3 {[QV]|[N{I|L}]|[RA]|[KV]}E 3 -1 12.447 0.0 0.0 0.50776 0.0 0.0 0.0 2092.2092300091176 2092.2092300091176 3.8907562519182193 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}E 0.50776 - 21 + 1 1.657 42991.4 1.0 2882 5177 8046 HBL1_DMSO_200M_050219_1,8061 HBL1_DMSO_200M_050219_1,8061, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8062 42.602 126.0 554980.0 25 0 95641.0 + 4533 DAYPKNPHL 9 87 527.769202481672 1053.523852030144 2 527.7692748904228 MULTI CID FTMS 0 0 0 8046 397955.03125 0.7427827145383249 -1 0.1437149047851562 16 Unmodified _DAYPKNPHL_ ENSG00000099940|ENST00000215730|SNAP29 36.12702656103203 0.0967173616627612 3 {[DA]|[EG]}YPKNP[H{I|L}] 9 0 + 58.478 0.0 0.0 5.5507 5.5507 83.084 0.0 0.0 0.0 3.748162098248997 6.1928031367991565 3.748162098248997 6.1928031367991565 0 1.2614393726401687 1.3010299956639813 0.0 0.0 + + {[DA]|[EG]}YPKNP[H{I|L}];{[DA]|[EG]}YPKN{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[DA]|[EG]}YPKGGP[H{I|L}];{[DA]|[EG]}Y{I|L}[EP]P[H{I|L}];{[DA]|[EG]}YPKGG{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[DA]|[EG]}Y{I|L}[EP]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 5.5507;4.9629;4.6767;4.4234;4.0889;3.8356 +;-;-;-;-;- + 188 + 1 1.657 59321.3 1.0 2883 5177 8046 HBL1_DMSO_200M_050219_1,8062 HBL1_DMSO_200M_050219_1,8062,DAYPKNPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8063 42.606 140.0 288550.0 25 0 14823.0 35038 SQRLESMVKN 10 88 596.3103704764337 1190.6061880196671 2 596.3105346560478 MULTI CID FTMS 0 0 0 8046 400420.0 1.0 0 0.0 17 Unmodified _SQRLESMVKN_ ENSG00000087128|ENST00000305363|TMPRSS11E 9.38312468134398 0.6832340498775793 3 [TP]PAQT 6 10 35.824 0.0 0.0 3.0089 0.0 0.0 0.0 592.2872542640611 592.2872542640611 25.33986249165785 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.7742275032520141 0.0 [TP]PAQT 3.0089 - 192 1 1.657 38559.1 1.0 2884 5177 8046 HBL1_DMSO_200M_050219_1,8063 HBL1_DMSO_200M_050219_1,8063,SQRLESMVKN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8064 42.61 177.0 507380.0 25 0 46044.0 + -1 SPSLFCCP 8 102 484.2058960524314 966.3972391716628 2 484.2058288455009 MULTI CID FTMS 0 0 0 8046 368841.15625 0.7803956077495026 -1 0.1437149047851562 18 2 Carbamidomethyl (C) _SPSLFC(Carbamidomethyl (C))C(Carbamidomethyl (C))P_ REV__ENST00000502555.5_1_17:48244836-48246708:+|nuORF 19.438996006549623 0.6237395211498085 3 [PS]S{I|L}VR 6 -1 50.065 0.0 0.0 5.1806 0.0 0.0 0.0 324.0042087363691 324.0042087363691 36.42024029122589 0.0 0.0 0.0 0 0.5 1.5228787452803376 1.045114016114533 0.0 [PS]S{I|L}VR 5.1806 - 158 1 1.657 74621.3 1.0 2885 5177 8046 HBL1_DMSO_200M_050219_1,8064 HBL1_DMSO_200M_050219_1,8064,SPSLFCCP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8065 42.619 531.0 381730.0 25 0 52240.0 3545 CYCRFFNAF 9 167 585.744441447109 1169.474329961018 2 585.7451049685478 MULTI CID FTMS 0 0 0 8046 343149.53125 0.8280087804883198 -1 0.1437149047851562 19 Unmodified _CYCRFFNAF_ ENSG00000159723|ENST00000290953|AGRP 23.1484247019978 0.2366544122328345 3 DEAQQNA{M(Oxidation (M))|F} 8 6 80.03 0.0 0.0 6.8432 0.0 0.0 248.0913563459 0.0 248.0913563459 0.0 53.54483709030223 0.0 0.0 0 0.805462187404089 0.0 1.0356668758921828 0.7742275032520141 DEAQQNA{M(Oxidation (M))|F} 6.8432 - 2817 1 1.657 152297.6 1.0 2886 5177 8046 HBL1_DMSO_200M_050219_1,8065 HBL1_DMSO_200M_050219_1,8065,CYCRFFNAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8066 42.632 732.0 94910.0 25 0 21991.0 -1 KTNKVTSQKMR 11 63 668.8728294723549 0 668.8730956912041 PEAK CID FTMS 0 0 0 8046 175735.9375 1.0 0 0.0 20 Oxidation (M) _KTNKVTSQKM(Oxidation (M))R_ ENST00000492650.1_1_13:53000173-53001170:-|nuORF 1.0714618166137932 0.4761840153648598 3 Q 1 -1 0.088644 0.0 0.0 0.0066364 0.0 0.0 932.507516999594 272.1417635553344 1204.6492805549285 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.0066364 + + 1 + 1 1.657 56960.4 1.0 2887 5177 8046 HBL1_DMSO_200M_050219_1,8066 HBL1_DMSO_200M_050219_1,8066,KTNKVTSQKMR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8068 42.636 10.0 4475200.0 25 0 582460.0 + 5781 DPPPGSHVI 9 68 459.7369120917008 917.4592712502016 2 459.7379028201103 MULTI CID FTMS 0 0 0 8067 4747399.0 0.1892367198238839 8 -0.6355781555175781 1 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 21.74664581756881 0.2544899275067181 3 [DP]P 3 6 40.502 0.0 0.0 4.4146 0.0 0.0 0.0 605.303087738736 605.303087738736 30.017346757967545 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 + [DP]P 4.4146 + + 141 1 1.645 41799.0 1.0 2888 5178 8067 HBL1_DMSO_200M_050219_1,8068 HBL1_DMSO_200M_050219_1,8068,DPPPGSHVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8069 42.637 19.0 2768600.0 25 0 373750.0 + 32278 RWPKKSAEF 9 84 383.5450870782333 1147.6134318349 3 383.5450317263603 MULTI CID FTMS 0 0 0 8067 2734289.25 0.7005678252270744 -3 0.296844482421875 2 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 19.256988751693697 0.3154191944385105 3 {M(Oxidation (M))|F} 1 8 20.485 0.0 0.0 1.785 0.0 0.0 982.5339926032578 0.0 982.5339926032578 0.0 11.505149978319906 0.0 0.0 0 0.5 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.785 + + 48 + 1 1.645 48282.1 1.0 2889 5178 8067 HBL1_DMSO_200M_050219_1,8069 HBL1_DMSO_200M_050219_1,8069,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8070 42.638 36.0 1530000.0 25 0 269370.0 26271 NQNSQFIQ 8 73 489.7356837106689 977.456814488138 2 489.7357055544853 MULTI CID FTMS 0 0 0 8067 1841118.875 0.4467005253184112 -2 0.2186164855957031 3 Unmodified _NQNSQFIQ_ ENSG00000185869|ENST00000391711|ZNF829;nc|ENSG00000185869|Q3KNS6-3|ZNF829 25.399314129420983 0.5099049743284904 3 {[CA]|SS}{I|L}D[C(Carbamidomethyl (C))R]{I|L}Q 8 6 + 45.935 0.0 0.0 4.6994 4.6994 74.278 0.0 0.0 0.0 34.96584697476848 5.757659435244733 5.757659435244733 1.7609125905568137 0 0.9247425010840048 0.0 0.0 0.7302046884880937 {[CA]|SS}{I|L}D[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}SWRDQ;{[CA]|SS}S{I|L}W[RD]Q;{[QN]|[E{I|L}]|[KN]}H[HS]D{I|L}Q;{[CA]|SS}{I|L}SWREN;{[CA]|SS}S{I|L}W{[RE]|[WV]}N;{[QN]|[E{I|L}]|[KN]}H[HS]{I|L}DQ 4.6994;4.5193;4.4554;3.8988;3.1589;2.3275;1.7709;1.6987 -;-;-;-;-;-;-;- 152 + 1 1.645 46808.1 1.0 2890 5178 8067 HBL1_DMSO_200M_050219_1,8070 HBL1_DMSO_200M_050219_1,8070,NQNSQFIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8071 42.64 67.0 1164100.0 25 0 173230.0 22509 LPVTAPRP 8 65 425.7608368711503 849.5071208091006 2 425.7609741091728 MULTI CID FTMS 0 0 0 8067 1316278.875 0.7703298424428386 1 -0.0710258483886718 4 Unmodified _LPVTAPRP_ ENST00000601438.2_1_19:47724381-47724582:-|nuORF 26.88365393820708 0.4786498634179528 3 {I|L}PVP[TA][RP] 8 2 + 61.688 0.0 0.0 7.2616 7.2616 80.822 0.0 0.0 0.0 53.895840698003 7.007046801327732 7.007046801327732 0.796896906561031 0 0.4247425010840047 2.0 0.3807196863200844 0.4247425010840047 {I|L}PVP[TA][RP];{I|L}PPV[TA][RP] 7.2616;7.1678 -;- 51 + 1 1.645 65851.5 1.0 2891 5178 8067 HBL1_DMSO_200M_050219_1,8071 HBL1_DMSO_200M_050219_1,8071,LPVTAPRP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8072 42.641 63.0 851230.0 25 0 98647.0 + -1 AEMSKSTT 8 70 435.6974484236197 869.3803439140395 2 435.6976501345634 MULTI CID FTMS 0 0 0 8067 935895.3125 0.6161065282422385 -2 0.2186164855957031 5 Oxidation (M) _AEM(Oxidation (M))SKSTT_ REV__ENSG00000089057|ENST00000338244|SLC23A2;REV__ENST00000468355.5_1_20:4850526-4913271:-|nuORF;REV__nc|ENSG00000089057|Q9UGH3-2|SLC23A2 4.3292370932331545 0.7980541185046766 3 T 1 -1 10.797 0.0 0.0 1.2419 0.0 0.0 157.10925593946132 608.2013942785853 765.3106502180467 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T 1.2419 + + 15 + 1 1.645 45757.0 1.0 2892 5178 8067 HBL1_DMSO_200M_050219_1,8072 HBL1_DMSO_200M_050219_1,8072,AEMSKSTT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8073 42.651 518.0 385340.0 25 0 47162.0 + 3172 AVVAGIAKA 9 174 400.2557192828101 798.4968856324201 2 400.2555114626884 MULTI CID FTMS 0 0 0 8067 407789.625 0.974003035178634 -1 0.0749015808105468 6 Unmodified _AVVAGIAKA_ ENSG00000159131|ENST00000381815|GART;ENST00000424203.5_1_21:34876433-34900844:-|nuORF 42.09456458481378 0.0639583784996157 3 {[VA]|[{I|L}G]}VAAVAKA 9 2 + 58.462 0.0 0.0 7.3215 7.3215 81.583 0.0 0.0 0.0 17.291201422347143 1.2173359673308823 1.2173359673308823 1.2173359673308823 0 1.4049471895720984 2.0 0.0 0.2614393726401688 {[VA]|[{I|L}G]}VAAVAKA;{[VA]|[{I|L}G]}VAAVAAK;{[VA]|[{I|L}G]}VA[Q{I|L}]KA;{[VA]|[{I|L}G]}VA[Q{I|L}]AK;{[VA]|[{I|L}G]}V[Q{I|L}]AKA;{[VA]|[{I|L}G]}V[Q{I|L}]AAK;{[VA]|[{I|L}G]}V[KS]PKA;{[VA]|[{I|L}G]}V[KS]PAK;{[VA]|[{I|L}G]}VE[R{I|L}]{I|L};{[VA]|[{I|L}G]}V[KS][KA]P 7.3215;7.1691;6.2363;6.0838;5.7595;5.607;4.6285;4.476;4.305;3.0139 -;-;-;-;-;-;-;-;-;- 437 + 1 1.645 157555.7 1.0 2893 5178 8067 HBL1_DMSO_200M_050219_1,8073 HBL1_DMSO_200M_050219_1,8073,AVVAGIAKA True True AVVAGIAKA 42.650582 400.255511462688 2163280.5 8067.0 ENST00000424203.5_1_21:34876433-34900844:-|nuORF;;ENSG00000159131|ENST00000381815|GART 2.8423103292783103 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8074 42.659 482.0 485770.0 25 0 98287.0 + 3290 AYHTQTTPL 9 209 516.2612826054385 1030.508012277677 2 516.2626220583916 MULTI CID FTMS 0 0 0 8067 386866.1875 0.2201004349340558 -2 0.2186164855957031 7 Unmodified _AYHTQTTPL_ ENSG00000004455|ENST00000672715|AK2;nc|ENSG00000004455|P54819-2|AK2;nc|ENSG00000004455|P54819-5|AK2;nc|ENSG00000004455|P54819-6|AK2 52.268347100219714 0.0353964759249114 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HTQTTP{I|L} 9 0 + 51.955 0.0 0.0 5.0417 5.0417 81.489 0.0 0.0 0.0 6.4035699682584095 4.968710376327813 4.968710376327813 6.4035699682584095 0 0.8701523956413709 0.958607314841775 2.0356668758921828 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HTQTTP{I|L};{[WN]|[YH]}ATQTTP{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HT[AG]TTP{I|L};[{I|L}P]{M(Oxidation (M))|F}DQTTP{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}[QA]QTTP{I|L};{[WN]|[YH]}AT[AG]TTP{I|L};[EP][{M(Oxidation (M))|F}V]QTTP{I|L};[{M(Oxidation (M))|F}V][EP]QTTP{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HG[TA]TTP{I|L};[PS][C(Carbamidomethyl (C))K]QTTP{I|L} 5.0417;4.4203;4.1481;3.954;3.7864;3.5267;3.5215;3.5032;3.4946;3.3916 +;-;-;-;-;-;-;-;-;- + 6617 1 1.645 192731.4 1.0 2894 5178 8067 HBL1_DMSO_200M_050219_1,8074 HBL1_DMSO_200M_050219_1,8074,AYHTQTTPL True True AYHTQTTPL 42.659107 516.262622058392 8147096.5 8067.0 nc|ENSG00000004455|P54819-5|AK2;;nc|ENSG00000004455|P54819-2|AK2;;ENSG00000004455|ENST00000672715|AK2;;nc|ENSG00000004455|P54819-6|AK2 6.789395332336426 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8075 42.67 599.0 441620.0 25 0 37285.0 + 2035 SGAPPVRSI 9 212 442.2532936218532 882.4920343105064 2 442.2529785037041 MULTI CID FTMS 0 0 0 8067 298551.90625 0.5716873777551504 2 -0.1412506103515625 8 Unmodified _APGSLRSPV_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35 18.13498045792455 0.3457906370836843 3 [SG]A 3 7 21.4 0.0 0.0 2.4249 0.0 0.0 0.0 664.3778429865407 664.3778429865407 4.805906063131719 0.0 0.0 0.0 0 0.5 0.744727494896694 0.0 0.0 [SG]A 2.4249 - 340 1 1.645 200161.1 1.0 2895 5178 8067 HBL1_DMSO_200M_050219_1,8075 HBL1_DMSO_200M_050219_1,8075,APGSLRSPV False False SGAPPVRSI 42.669565 442.252978503704 9566065.0 8067.0 ENSG00000163002|ENST00000295119|NUP35;;nc|ENSG00000163002|Q8NFH5-2|NUP35 1.523709257443746 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8076 42.679 541.0 394370.0 25 0 24045.0 + 15383 LPNPTKPNNV 10 180 547.3062212689401 1092.5978896046802 2 547.3043090701103 MULTI CID FTMS 0 0 0 8067 292110.4375 0.1897524123183631 4 -0.3057212829589844 9 Carbamidomethyl (C) _IPNPC(Carbamidomethyl (C))LALPV_ nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;ENSG00000171681|ENST00000261168|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF 60.38955033654506 0.0355643171799535 3 {I|L}PNPTKH{[WT]|[RM]} 9 6 + 100.4 0.0 0.0 9.1894 9.1894 89.124 0.0 0.0 0.0 30.79812217439504 4.068696578495633 4.068696578495633 4.068696578495633 0 1.5669015600442575 1.6989700043360187 0.6861818737241735 1.4049471895720984 {I|L}PNPTKH{[WT]|[RM]};{I|L}PNPTKHTSV;{I|L}PNPTKHSTV;{I|L}PGGPTKH{[WT]|[RM]};{I|L}PNPTK[NP]NV;{I|L}PNPTKHSS{I|L};{I|L}PGGPTKHTSV;{I|L}PGGPTKHSTV;{I|L}PGGPTK[NP]NV;{I|L}PNPTK[NP]GGV 9.1894;8.817;8.6538;8.3466;8.3454;8.0765;7.9782;7.815;7.5066;7.3245 -;-;-;-;-;-;-;-;-;- 7646 + 1 1.645 167022.4 1.0 2896 5178 8067 HBL1_DMSO_200M_050219_1,8076 HBL1_DMSO_200M_050219_1,8076,IPNPCLALPV True False LPNPTKPNNV 42.679074 547.30430907011 15890122.0 8067.0 nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;;ENSG00000171681|ENST00000261168|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;;ENST00000537653.5_1_12:14576849-14628955:+|nuORF 8.052652517954508 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8077 42.691 681.0 178300.0 25 0 10981.0 11254 GESLKRGE 8 181 438.2335082888603 0 438.2335082888603 PEAK CID FTMS 0 0 0 -1 0 10 Unmodified _GESLKRGE_ ENSG00000151835|ENST00000382292|SACS;nc|ENSG00000151835|Q9NZJ4-2|SACS 10.073929032068715 0.5407296281113586 3 S{I|L} 2 6 13.271 0.0 0.0 1.5177 0.0 0.0 186.06435436893315 485.24858890290346 671.3129432718366 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + S{I|L} 1.5177 + + 35 + 1 1.645 97502.2 1.0 2897 5178 8067 HBL1_DMSO_200M_050219_1,8077 HBL1_DMSO_200M_050219_1,8077,GESLKRGE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8078 42.703 689.0 344150.0 25 0 17092.0 + 2417 AQQITQTEV 9 227 509.2639861624257 0 509.2645141482353 PEAK CID FTMS 0 0 0 8067 171237.65625 0.3613068752357647 -1 0.0749015808105468 11 Unmodified _AQQITQTEV_ ENSG00000066136|ENST00000447388|NFYC;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC 96.11092074494114 0.0290911520821073 3 HQT{I|L}QA 6 6 30.527 0.0 0.0 3.0031 0.0 0.0 210.11932867075137 125.0363253229125 335.15565399366386 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.6694451763165201 0.6237125054200234 HQT{I|L}QA 3.0031 - 1406 + 1 1.645 181577.6 1.0 2898 5178 8067 HBL1_DMSO_200M_050219_1,8078 HBL1_DMSO_200M_050219_1,8078,AQQITQTEV True True AQQITQTEV 42.70288 509.264514148235 2322302.75 8067.0 ENSG00000066136|ENST00000447388|NFYC;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC 5.929932912190755 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8080 42.707 1.9 22104000.0 25 0 4707400.0 + 43010 VVYGGKSTI 9 58 462.2633370071416 922.5121210810833 2 462.2636291384697 MULTI CID FTMS 0 0 0 8079 30367274.0 0.5964330924263206 2 -0.1472206115722656 1 Unmodified _VVYGGKSTI_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54631532-54634860:+|nuORF 17.11289562659939 0.3734572693229295 3 VVYRYGGG 8 6 52.841 0.0 0.0 5.728 0.0 0.0 0.0 68.05139337711171 68.05139337711171 37.62456261857125 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VVYRYGGG 5.728 - 242 + 1 1.645 42116.9 1.0 2899 5179 8079 HBL1_DMSO_200M_050219_1,8080 HBL1_DMSO_200M_050219_1,8080,VVYGGKSTI False True VVYGGKSTI 42.706992 462.26362913847 862070784.0 8079.0 ENST00000466404.5_1_19:54631532-54634860:+|nuORF;;ENSG00000105618|ENST00000321030|PRPF31 3.4729220072428384 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8081 42.708 9.9 3767200.0 25 0 230190.0 + 2671 ATDPTIHTV 9 67 477.7481638411996 953.4817747491992 2 477.7483093142509 MULTI CID FTMS 0 0 0 8079 4901795.0 0.3018151907438485 2 -0.1472206115722656 2 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 48.345845343767074 0.0439967357579942 3 [TA]DP[{I|L}T]H{[TV]|[{I|L}S]} 9 0 + 47.693 0.0 0.0 5.002 5.002 85.971 0.0 0.0 0.0 27.542644353703523 7.169577525961266 7.169577525961266 12.313856900900149 0 0.3494850021680094 2.0 1.3494850021680094 0.0 + + [TA]DP[{I|L}T]H{[TV]|[{I|L}S]};[TA]{[ET]|[MV]}T{I|L}[YR];[TA]{[ET]|[MV]}[VP]H{[TV]|[{I|L}S]};[HT]V{I|L}T{[ET]|[MV]}[PG];[HT]{I|L}VT{[ET]|[MV]}[PG] 5.002;3.7105;3.1144;1.5593;1.2436 +;-;-;-;- + 125 + 1 1.645 37577.3 1.0 2900 5179 8079 HBL1_DMSO_200M_050219_1,8081 HBL1_DMSO_200M_050219_1,8081,ATDPTIHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8082 42.709 36.0 1341500.0 25 0 231660.0 + 23802 LVDSNNPKI 9 57 500.27680301956775 998.5390531059356 2 500.2776672244072 MULTI CID FTMS 0 0 0 8079 1408341.75 1.0 0 0.0 3 Unmodified _LVDSNNPKI_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928-2|POLR2A;nc|ENSG00000181222|P24928|POLR2A 21.53697664764585 0.2571576504437394 3 {I|L}VD[NS]NP[K{I|L}] 9 0 + 57.101 0.0 0.0 5.7184 5.7184 80.58 0.0 0.0 0.0 46.50484304361862 4.137342758552691 4.137342758552691 3.4678748622465605 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}VD[NS]NP[K{I|L}];{I|L}VD[WE]P[K{I|L}];{I|L}VD[NS]GGP[K{I|L}];{I|L}V{[WT]|[RM]}[HC][K{I|L}] 5.7184;5.3711;4.7963;3.7948 +;-;-;- + 102 + 1 1.645 41011.3 1.0 2901 5179 8079 HBL1_DMSO_200M_050219_1,8082 HBL1_DMSO_200M_050219_1,8082,LVDSNNPKI False True LVDSNNPKI 42.709348 500.277667224407 35076208.0 8079.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A;;nc|ENSG00000181222|P24928-2|POLR2A 5.274528503417969 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8083 42.711 76.0 1229400.0 25 0 121260.0 -1 QGAPCGLGP 9 117 428.7030561469647 855.3915593607294 2 428.7031127810478 MULTI CID FTMS 0 0 0 8079 980887.5625 1.0 0 0.0 4 Carbamidomethyl (C) _QGAPC(Carbamidomethyl (C))GLGP_ ENST00000302517.7_1_5:139063018-139063435:+|nuORF 7.910154910731844 0.6385446671287552 3 {I|L} 1 -1 14.604 0.0 0.0 1.7073 0.0 0.0 724.2964493527201 0.0 724.2964493527201 0.0 4.426806100157563 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.7073 + + 103 + 1 1.645 76581.6 1.0 2902 5179 8079 HBL1_DMSO_200M_050219_1,8083 HBL1_DMSO_200M_050219_1,8083,QGAPCGLGP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8084 42.713 74.0 1335300.0 25 0 114600.0 + 4532 DAYPKNPHL 9 98 352.18252613856373 1053.5257490158913 3 352.1826049685478 MULTI CID FTMS 0 0 0 8079 748925.9375 0.598127760824268 1 -0.0702247619628906 5 Unmodified _DAYPKNPHL_ ENSG00000099940|ENST00000215730|SNAP29 26.88365393820708 0.1891292719743517 3 {[DA]|[EG]}YPKNPH{I|L} 9 0 + 59.176 0.0 0.0 5.617 5.617 86.45 0.0 0.0 0.0 48.20732830475286 8.39917580517492 8.39917580517492 9.208187539523747 0 0.2887254899964357 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YPKNPH{I|L};{[DA]|[EG]}YPKGGPH{I|L};{[DA]|[EG]}YPK[WK]{M(Oxidation (M))|F};WY{I|L}[EP]PH{I|L};WYPKK{[DA]|[EG]}{M(Oxidation (M))|F} 5.617;4.743;3.8593;2.9366;1.7355 +;-;-;-;- + 130 + 1 1.645 88236.1 1.0 2903 5179 8079 HBL1_DMSO_200M_050219_1,8084 HBL1_DMSO_200M_050219_1,8084,DAYPKNPHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8085 42.715 82.0 663690.0 25 0 110360.0 + 5054 DGYEQAARV 9 77 504.7406236745259 1007.466694415852 2 504.7401611208916 MULTI CID FTMS 0 0 0 8079 479898.09375 0.0769183143570551 17 -1.2097549438476562 6 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 36.12702656103203 0.0967173616627612 3 [DG]YEQAA[RV] 9 0 [DG]Y + + 44.085 7.3688 2.1989 4.3759 4.3759 53.63 0.0 0.0 0.0 0.0 22.034021960761265 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.7614393726401688 + + [DG]YEQAA[RV] 4.3759 + + 83 + 1 1.645 46343.5 1.0 2904 5179 8079 HBL1_DMSO_200M_050219_1,8085 HBL1_DMSO_200M_050219_1,8085,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8086 42.723 463.0 405200.0 25 0 57725.0 + 32283 RWPKKSAEF 9 158 574.8139164908926 1147.613280048585 2 574.8136474490166 MULTI CID FTMS 0 0 0 8079 354640.875 0.6393780664603411 -1 0.0710258483886718 7 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 86.33184430468982 0.0159826143231117 3 [WR][KP]KSAE{M(Oxidation (M))|F} 9 0 + 81.775 0.0 0.0 7.1257 7.1257 85.765 0.0 0.0 0.0 15.57914649780642 64.49478448944497 15.57914649780642 4.247425010840047 0 1.2786596949921218 1.3010299956639813 0.7302046884880937 0.9802046884880936 + + [WR][KP]KSAE{M(Oxidation (M))|F};[WR][KP]KSA{M(Oxidation (M))|F}E;[WP][RK]KSAE{M(Oxidation (M))|F};[WP][RK]KSA{M(Oxidation (M))|F}E;[KP][WR]KSAE{M(Oxidation (M))|F};[KP][WR]KSA{M(Oxidation (M))|F}E;[WR][KP]K{[WT]|[RM]}{M(Oxidation (M))|F};[KP][KC]K[TP]AE{M(Oxidation (M))|F};{[CP]|[EA]}KKV{[QV]|[N{I|L}]|[RA]|[KV]}AE{M(Oxidation (M))|F};{[CP]|[EA]}KKK[TP]AE{M(Oxidation (M))|F} 7.1257;6.7555;5.5939;5.2238;5.2073;4.8372;4.2871;3.4607;3.4083;3.3072 +;-;-;-;-;-;-;-;-;- + 557 1 1.645 144500.1 1.0 2905 5179 8079 HBL1_DMSO_200M_050219_1,8086 HBL1_DMSO_200M_050219_1,8086,RWPKKSAEF True True RWPKKSAEF 42.72289 574.813647449017 647327678.0 8079.0 nc|ENSG00000265681|P18621-2|RPL17;;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;;nc|ENSG00000265681|P18621-3|RPL17;;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;;ENSG00000265681|ENST00000580261|RPL17 7.666707038879394 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8087 42.729 352.0 373200.0 25 0 44944.0 + + 27501 YPLTAPHKTV 10 155 376.5660390265771 0 376.5658447146416 PEAK CID FTMS 0 0 0 8079 270754.40625 1.0 0 0.0 8 Unmodified _PKHIHLRQV_ ENSG00000198879|ENST00000397167|SFMBT2 4.3292370932331545 0.3444685223463734 3 N 1 -1 4.6041 0.0 0.0 0.61297 0.0 0.0 374.9784087642885 259.07612024478755 634.0545290090761 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.61297 - 35 + 1 1.645 111968.9 1.0 2906 5179 8079 HBL1_DMSO_200M_050219_1,8087 HBL1_DMSO_200M_050219_1,8087,PKHIHLRQV False False YPLTAPHKTV 42.729238 376.565844714642 1895173.125 8079.0 ENSG00000198879|ENST00000397167|SFMBT2 4.875581900278728 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8088 42.732 128.0 497020.0 25 0 55687.0 + 26848 PASPPPAPV 9 106 416.7323482089888 831.4501434847776 2 416.7333862185478 MULTI CID FTMS 0 0 0 8079 270660.8125 0.5645988352028903 2 -0.1472206115722656 9 Unmodified _PASPPPAPV_ ENST00000368842.9_1_10:126301925-126302186:+|nuORF 53.57557251787612 0.0325303259649373 3 [PS]APPP 6 4 36.52 0.0 0.0 4.3924 0.0 0.0 0.0 282.1463941242336 282.1463941242336 4.566974808785545 0.0 0.0 0.0 0 0.805462187404089 0.9208187539523752 0.6861818737241735 0.0 [PS]APPP 4.3924 - 227 1 1.645 52728.9 1.0 2907 5179 8079 HBL1_DMSO_200M_050219_1,8088 HBL1_DMSO_200M_050219_1,8088,PASPPPAPV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8089 42.742 561.0 308130.0 25 0 66777.0 + 32407 RYYDDPREY 9 109 638.7827591150896 1275.550965296979 2 638.7826415896416 MULTI CID FTMS 0 0 0 8079 228091.15625 0.3810655714852997 -2 0.1459274291992187 10 Unmodified _RYYDDPREY_ ENSG00000065526|ENST00000375759|SPEN 27.628801355627647 0.1796483985696185 3 [RP][DN]DD 6 6 17.113 0.0 0.0 1.3416 0.0 0.0 0.0 560.245148858512 560.245148858512 4.832881222565252 0.0 0.0 0.0 0 0.5 0.0 0.0 1.1989700043360187 [RP][DN]DD 1.3416 - 237 1 1.645 127875.5 1.0 2908 5179 8079 HBL1_DMSO_200M_050219_1,8089 HBL1_DMSO_200M_050219_1,8089,RYYDDPREY False True RYYDDPREY 42.741711 638.782641589642 6423176.0 8079.0 ENSG00000065526|ENST00000375759|SPEN 6.177526632944743 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8090 42.752 581.0 209130.0 25 0 12759.0 + 17909 KQTPDFHTV 9 168 536.7742640831979 1071.5339752331956 2 536.7752563357353 MULTI CID FTMS 0 0 0 8079 213901.390625 0.7749991593134427 4 -0.3433799743652344 11 Unmodified _KQTPDFHTV_ ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733207-65733809:+|nuORF 61.60191391372663 0.0251951588191061 3 [AG]KT[DP]{M(Oxidation (M))|F}HTV 10 3 + 38.894 0.0 0.0 3.6298 3.6298 70.164 0.0 0.0 0.0 1.163385648463816 10.789469800423008 1.163385648463816 1.2173359673308823 0 1.7249073637206092 1.0 0.4247425010840047 0.5 [AG]KT[DP]{M(Oxidation (M))|F}HTV;[KQ]T[DP]{M(Oxidation (M))|F}HTV;[DP]{M(Oxidation (M))|F}HTVTQK;{NN|[MP]|[D{I|L}]|[EV]}MHTVTQK;[{I|L}A]{[WN]|[YH]}[DP]TQK;{[{M(Oxidation (M))|F}H]|[RQ]}{[RE]|[WV]}{M(Oxidation (M))|F}HTV;[KA]GT[DP]{M(Oxidation (M))|F}HTV;{[{M(Oxidation (M))|F}H]|[RQ]}[DP]TVTQK;[DP]{M(Oxidation (M))|F}[{I|L}P]{M(Oxidation (M))|F}HTV;[VG][QA][DV]{M(Oxidation (M))|F}HTV 3.6298;3.5161;3.4021;2.9841;2.9603;2.8664;2.7339;2.7021;2.7021;2.6967 -;+;-;-;-;-;-;-;-;- + 936 1 1.645 98596.6 1.0 2909 5179 8079 HBL1_DMSO_200M_050219_1,8090 HBL1_DMSO_200M_050219_1,8090,KQTPDFHTV True True KQTPDFHTV 42.75189 536.775256335735 4409199.5 8079.0 ENST00000583108.5_1_17:65733207-65733809:+|nuORF;;ENSG00000130935|ENST00000253247|NOL11 6.10467529296875 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8091 42.763 612.0 302610.0 25 0 10442.0 + 26790 PAMAYPPSPL 10 210 522.2673411339869 1042.5201293347736 2 522.2692748904228 MULTI CID FTMS 0 0 0 8079 184857.46875 0.3931142003377939 -4 0.3678703308105469 12 Unmodified _PAMAYPPSPL_ REV__ENST00000477541.1_1_6:32916643-32917850:-|nuORF 24.020572477871973 0.4289996903560794 3 {I|L}PCGYPPPTV 10 -1 + 31.865 0.0 0.0 3.0565 3.0565 70.506 0.0 0.0 0.0 11.458650866879909 2.075520205222439 2.075520205222439 2.075520205222439 0 0.3807196863200844 0.638272163982407 1.4468199613955397 0.0 {I|L}PCGYPPPTV;{I|L}PCGYPPPS{I|L};{I|L}PCE{[RE]|[WV]}PTV;{I|L}PCE{[RE]|[WV]}PS{I|L};{I|L}PC(Carbamidomethyl (C))YPPPTV;{I|L}PCGYPP{[TV]|[{I|L}S]}P;{I|L}PC(Carbamidomethyl (C))YPPPS{I|L};{[CP]|[EA]}{I|L}GYPPPTV;{I|L}PCE{[RE]|[WV]}{[TV]|[{I|L}S]}P;{I|L}PCGY[YK]TV 3.0565;2.8574;2.6375;2.4384;2.4067;2.3721;2.2076;1.9574;1.9531;1.9088 -;-;-;-;-;-;-;-;-;- 1037 + 1 1.645 145206.0 1.0 2910 5179 8079 HBL1_DMSO_200M_050219_1,8091 HBL1_DMSO_200M_050219_1,8091,PAMAYPPSPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8092 42.773 602.0 432470.0 25 0 56912.0 + -1 MTDDKITEV 9 242 534.2504576466415 1066.486362360083 2 534.2494994997978 MULTI CID FTMS 0 0 0 8079 189885.65625 0.6807422048692743 -1 0.0710258483886718 13 Oxidation (M) _M(Oxidation (M))TDDKITEV_ nc|ENSG00000148773|P46013-2|MKI67;ENSG00000148773|ENST00000368654|MKI67;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67 38.61474834105838 0.0830609365873449 3 {NN|[MP]|[D{I|L}]|[EV]}DKT{M(Oxidation (M))|F}TEV 9 -1 + 41.638 0.0 0.0 3.9042 3.9042 69.152 0.0 0.0 0.0 0.1977049184772852 10.940110896971394 0.1977049184772852 0.1977049184772852 0 0.4326217639455209 1.2218487496163564 0.9141478515490356 0.0 {NN|[MP]|[D{I|L}]|[EV]}DKT{M(Oxidation (M))|F}TEV;{[TV]|[{I|L}S]}DRT{M(Oxidation (M))|F}TEV;{NN|[MP]|[D{I|L}]|[EV]}SRT{M(Oxidation (M))|F}TEV;{[TV]|[{I|L}S]}WW{M(Oxidation (M))|F}TEV;{NN|[MP]|[D{I|L}]|[EV]}DKTET{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}DRTET{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}D[VG]T{M(Oxidation (M))|F}TEV;{[TV]|[{I|L}S]}[WE]G{M(Oxidation (M))|F}TEV;{NN|[MP]|[D{I|L}]|[EV]}SRTET{M(Oxidation (M))|F}V;[PS]EMT{M(Oxidation (M))|F}NNK 3.9042;3.8856;3.6648;3.2616;3.1296;3.1111;3.0222;2.9314;2.8902;2.8784 -;-;-;-;-;-;-;-;-;- 8288 1 1.645 199151.9 1.0 2911 5179 8079 HBL1_DMSO_200M_050219_1,8092 HBL1_DMSO_200M_050219_1,8092,MTDDKITEV False False MTDDKITEV 42.773125 534.249499499798 1257532.625 8079.0 nc|ENSG00000148773|P46013-2|MKI67;;ENSG00000148773|ENST00000368654|MKI67;;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67 5.309386253356934 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8094 42.784 415.0 221480.0 25 0 16320.0 + 22957 LSFDYMFIQ 9 105 582.275197620095 1162.53584230699 2 582.2736083865166 MULTI CID FTMS 0 0 0 8093 205201.671875 0.2594556683078495 3 -0.2731552124023437 1 Unmodified _LSFDYMFIQ_ REV__nc|ENSG00000165006|Q9NZ09-3|UBAP1 19.256988751693697 0.3154191944385105 3 {[QG]|[NA]}{[NV]|[RG]}[WD]G{M(Oxidation (M))|F}{I|L}Q 10 -1 + 49.9 0.0 0.0 4.2923 4.2923 85.195 0.0 0.0 0.0 13.944021793654857 34.90463059526341 13.944021793654857 22.302046884880937 0 1.3807196863200843 1.3979400086720375 0.0 0.5 {[QG]|[NA]}{[NV]|[RG]}[WD]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}[NG][WD]G{M(Oxidation (M))|F}{I|L}Q 4.2923;2.3739 -;- 114 1 1.622 71592.6 1.0 2912 5180 8093 HBL1_DMSO_200M_050219_1,8094 HBL1_DMSO_200M_050219_1,8094,LSFDYMFIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8095 42.785 48.0 1867800.0 25 0 247600.0 + 22088 LPPPVAVRK 9 75 326.2149630110197 975.6230596332592 3 326.2148925662041 MULTI CID FTMS 0 0 0 8093 1100624.875 0.3817672203917916 -11 1.009929656982422 2 Unmodified _LPPPVAVRK_ ENSG00000184271|ENST00000333640|POU6F1;nc|ENSG00000184271|Q14863|POU6F1 15.847184025352805 0.4077185912009129 3 {I|L}PPP 4 5 51.983 0.0 0.0 5.3281 0.0 0.0 0.0 568.3585830761099 568.3585830761099 41.9825221775622 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 + {I|L}PPP 5.3281 + + 36 + 1 1.622 76256.2 1.0 2913 5180 8093 HBL1_DMSO_200M_050219_1,8095 HBL1_DMSO_200M_050219_1,8095,LPPPVAVRK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8096 42.788 128.0 686550.0 25 0 117640.0 -1 0 109 416.21271754752 415.20544108092 1 416.2133056521416 MULTI CID FTMS 0 0 0 8093 464562.0625 0.2988262105045894 -1 0.0702247619628906 3 3 [TA]APG 5 -1 + 21.458 0.0 0.0 5.1681 5.1681 78.631 0.0 0.0 0.0 3.4498542409024395 7.8309188673223 3.4498542409024395 3.4498542409024395 0 0.0 0.958607314841775 0.4247425010840047 0.0 [TA]APG;{[QD]|[EN]|[WG]|[KD]|[RS]}PG;[VG]SPG;[PS]VGG;[NS]PV;[PA][TA]G;[TP]AAG;[PS]AAA 5.1681;4.3372;3.8855;1.8506;1.5032;1.4681;0.46181;0.40746 -;-;-;-;-;-;-;- 54 1 1.622 72474.2 1.0 2914 5180 8093 HBL1_DMSO_200M_050219_1,8096 HBL1_DMSO_200M_050219_1,8096, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8097 42.798 570.0 265790.0 25 0 13678.0 -1 0 89 1118.3614571970309 5586.770903652155 5 1119.165576159954 MULTI CID FTMS 0 0 0 8093 408752.03125 1.0 0 0.0 4 3 G 1 -1 11.99 0.0 0.0 0.21461 0.0 0.0 3691.8796755056137 1834.860836375164 5526.740511880777 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 G 0.21461 - 91 + 1 1.622 112904.4 1.0 2915 5180 8093 HBL1_DMSO_200M_050219_1,8097 HBL1_DMSO_200M_050219_1,8097, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8098 42.801 181.0 488690.0 25 0 41310.0 28826 QADPAGPALV 10 118 469.7524679515066 937.4903829698133 2 469.7508117556572 MULTI CID FTMS 0 0 0 8093 379025.40625 0.961430345679529 -1 0.0702247619628906 5 Unmodified _QADPAGPALV_ ENST00000405659.5_2_22:30769731-30772445:+|nuORF;ENST00000475975.5_1_22:30770077-30772445:+|nuORF 27.628801355627647 0.3479284626772844 3 [{I|L}A]PDVSHTV 9 7 + 64.424 0.0 0.0 6.872 6.872 89.369 0.0 0.0 0.0 37.64101137402571 3.586455032219945 3.586455032219945 8.810931010908988 0 0.4247425010840047 2.0 1.9698565171985376 0.0 [{I|L}A]PDVSHTV;[{I|L}A]PDVS{[TV]|[{I|L}S]}H;[{I|L}A]PD[{I|L}T][TA]H;[{I|L}A]PD[{I|L}T][DP]P;[{I|L}A]{[ET]|[MV]}VP[TA]H;[{I|L}A][{I|L}T]DP[TA]H;[{I|L}A]{[ET]|[MV]}[PA]HTV;[{I|L}A]{[ET]|[MV]}VP[DP]P;[{I|L}A]{[ET]|[MV]}VS[YR];[{I|L}A]{[{M(Oxidation (M))|F}H]|[RQ]}[WK]H 6.872;5.9321;4.9559;4.3498;3.7526;3.4315;3.2182;3.1465;3.1371;2.9337 -;-;-;-;-;-;-;-;-;- 579 + 1 1.622 76388.3 1.0 2916 5180 8093 HBL1_DMSO_200M_050219_1,8098 HBL1_DMSO_200M_050219_1,8098,QADPAGPALV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8099 42.805 171.0 470790.0 25 0 43789.0 + 43052 VYHNVKPAAL 10 115 556.3165664205278 1110.6185799078555 2 556.3176757693291 MULTI CID FTMS 0 0 0 8093 328409.59375 1.0 0 0.0 6 Unmodified _VYHNVKPAAL_ ENSG00000145781|ENST00000274458|COMMD10 56.17704186161178 0.0466144807663799 3 VYHRGK[PA]A{I|L} 10 2 + 72.427 0.0 0.0 6.5214 6.5214 82.825 0.0 0.0 0.0 60.437682432062445 1.5490195998574308 1.5490195998574308 3.182503180159344 0 1.274227503252014 2.0 0.0 0.0 VYHRGK[PA]A{I|L};VYHNVK[PA]A{I|L};VYHRV[{I|L}V][EP];VYH[VG]GK[PA]A{I|L};VYHGGVK[PA]A{I|L};VYH[VG]V[{I|L}V][EP];{[QV]|[N{I|L}]|[RA]|[KV]}[KT]VRH{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QV]|[N{I|L}]|[RA]|[KV]}[KT]V[VG]H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.5214;6.2348;5.7133;5.6962;5.4096;4.8842;3.1709;2.3418 -;+;-;-;-;-;-;- + 400 + 1 1.622 68743.0 1.0 2917 5180 8093 HBL1_DMSO_200M_050219_1,8099 HBL1_DMSO_200M_050219_1,8099,VYHNVKPAAL True True VYHNVKPAAL 42.804504 556.3197 1690511.125 8093.0 ENSG00000145781|ENST00000274458|COMMD10 7.200220584869385 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8100 42.814 541.0 225760.0 25 0 24123.0 -1 ENKSCNDKLQ 10 129 618.2863167319335 1234.558080530667 2 618.2880737185478 MULTI CID FTMS 0 0 0 8093 232590.96875 0.4822145073601274 -1 0.0702247619628906 7 Carbamidomethyl (C) _ENKSC(Carbamidomethyl (C))NDKLQ_ ENSG00000138193|ENST00000371380|PLCE1;nc|ENSG00000138193|Q9P212-2|PLCE1 51.629811660486645 0.0705852162080619 3 {[QD]|[EN]|[WG]|[KD]|[RS]}REQDG{M(Oxidation (M))|F}{I|L}Q 10 -1 + 71.151 0.0 0.0 5.7633 5.7633 78.018 0.0 0.0 0.0 5.791812460476251 52.181368535187225 5.791812460476251 1.7731749024395782 0 1.424742501084005 0.0 0.3494850021680094 1.0044321917401078 {[QD]|[EN]|[WG]|[KD]|[RS]}REQDG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}ERQDG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}RE[AG]DG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}ER[AG]DG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}E[VG]QDG{M(Oxidation (M))|F}{I|L}Q;{[{M(Oxidation (M))|F}H]|[RQ]}DEQDG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}RE{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}R[DC][PG]G{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}ER{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QRQDG{M(Oxidation (M))|F}{I|L}Q 5.7633;5.6197;5.021;4.8774;4.8774;4.7497;4.5254;4.5203;4.3818;4.308 -;-;-;-;-;-;-;-;-;- 1578 1 1.622 95392.9 1.0 2918 5180 8093 HBL1_DMSO_200M_050219_1,8100 HBL1_DMSO_200M_050219_1,8100,ENKSCNDKLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8101 42.826 698.0 400960.0 25 0 62699.0 + 24399 MFPERVRSA 9 191 364.85879245084885 1091.5545479527466 3 364.8586303591728 MULTI CID FTMS 0 0 0 8093 211428.9375 0.5742829808683704 3 -0.2731552124023437 8 Unmodified _MFPERVRSA_ ENSG00000100216|ENST00000216034|TOMM22;ENST00000492561.1_1_22:39078186-39079843:+|nuORF 38.17557092003332 0.0854718145212029 3 M{M(Oxidation (M))|F}PER 5 4 50.165 0.0 0.0 4.5957 0.0 0.0 0.0 428.22687708072505 428.22687708072505 30.9568378181978 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 1.6237125054200234 + M{M(Oxidation (M))|F}PER 4.5957 + + 473 + 1 1.622 224400.0 1.0 2919 5180 8093 HBL1_DMSO_200M_050219_1,8101 HBL1_DMSO_200M_050219_1,8101,MFPERVRSA True True MFPERVRSA 42.826137 364.858630359173 17638342.0 8093.0 ENSG00000100216|ENST00000216034|TOMM22;;ENST00000492561.1_1_22:39078186-39079843:+|nuORF 6.505489031473796 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8102 42.837 609.0 458600.0 25 0 59097.0 + 3838 DAIVVRKM 8 202 466.2730676754388 930.5315824176776 2 466.2735778689384 MULTI CID FTMS 0 0 0 8093 208117.640625 0.4078074808743163 -1 0.0702247619628906 9 Unmodified _DAIVVRKM_ ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;nc|ENSG00000068878|Q14997-3|PSME4 58.6788170122104 0.1149141431586871 3 DA{I|L}VVRKM 8 0 + 82.917 0.0 0.0 8.9107 8.9107 95.405 0.0 0.0 0.0 33.39948061694351 10.162703231326262 10.162703231326262 10.162703231326262 0 1.6549471895720984 1.6989700043360187 0.0 0.3494850021680094 + + DA{I|L}VVRKM;DA{I|L}VVRMK;DA{I|L}VV[KT]SV;{[DA]|[EG]}{I|L}VK[RV]M;DA{I|L}[NS][RK]K;[{I|L}A]DVK[RV]M;DA[WK][RK]K;{NN|[MP]|[D{I|L}]|[EV]}AVK[RV]M;[{I|L}V]{[DA]|[EG]}K[RV]M;{[CP]|[EA]}VVK[RV]M 8.9107;7.8186;6.7336;5.0699;4.1622;2.5633;2.5605;1.8239;1.3208;1.2645 +;-;-;-;-;-;-;-;-;- + 611 + 1 1.622 214439.7 1.0 2920 5180 8093 HBL1_DMSO_200M_050219_1,8102 HBL1_DMSO_200M_050219_1,8102,DAIVVRKM True True DAIVVRKM 42.836766 466.273577868938 1850198.25 8093.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4;;nc|ENSG00000068878|Q14997-3|PSME4 4.481820901234944 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8103 42.85 771.0 286680.0 25 0 34351.0 13062 HCCGAGCC 8 236 377.1004697282239 0 376.9000732302666 PEAK CID FTMS 0 0 0 -1 0 10 Unmodified _HCCGAGCC_ ENST00000535177.1_1_11:61120996-61124198:-|nuORF;ENST00000540139.5_3_11:61120480-61121493:-|nuORF 0.0 0.6010389664953673 3 VD 2 8 12.657 0.0 0.0 1.6827 0.0 0.0 198.9967635757853 336.06950338188767 535.066266957673 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6203715150305281 0.0 VD 1.6827 - 44 + 1 1.622 179185.0 1.0 2921 5180 8093 HBL1_DMSO_200M_050219_1,8103 HBL1_DMSO_200M_050219_1,8103,HCCGAGCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8105 42.854 2.6 17679000.0 25 0 2193500.0 + 6383 DWAKLIKRL 9 77 381.5740224073071 1141.7002378221214 3 381.5742065310478 MULTI CID FTMS 0 0 0 8104 16976920.0 0.4783208646815247 2 -0.1961593627929687 1 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 2.282774691075616 0.8349936567342158 3 K{I|L}K[QP]E 6 -1 26.911 0.0 0.0 2.3571 0.0 0.0 400.2804432599625 0.0 400.2804432599625 0.0 15.94212497064703 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.3571 - 36 1 1.622 44054.0 1.0 2922 5181 8104 HBL1_DMSO_200M_050219_1,8105 HBL1_DMSO_200M_050219_1,8105,DWAKLIKRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8106 42.855 2.4 19821000.0 25 0 2237700.0 + 21848 LPPDLRFDQ 9 84 367.5296169275622 1099.5670213828869 3 367.5294982790947 MULTI CID FTMS 0 0 0 8104 4222669.0 0.4037678712125269 2 -0.1961593627929687 2 Unmodified _LPPDLRFDQ_ REV__ENST00000301332.2_1_8:145699090-145699315:+|nuORF 11.640296217721598 0.521594087909532 3 [KC]PH[{I|L}T][R{M(Oxidation (M))|F}]V 9 -1 + 17.113 0.0 0.0 1.5563 1.5563 79.812 0.0 0.0 0.0 0.5707433641744366 0.9151498112134996 0.5707433641744366 17.113037394097436 0 0.0 0.0 0.0 0.0 [KC]PH[{I|L}T][R{M(Oxidation (M))|F}]V 1.5563 - 104 + 1 1.622 47681.9 1.0 2923 5181 8104 HBL1_DMSO_200M_050219_1,8106 HBL1_DMSO_200M_050219_1,8106,LPPDLRFDQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8107 42.857 2.2 21169000.0 25 0 2452000.0 + 21441 LPHHRVIEV 9 84 367.2174237042729 1098.6304417130186 3 367.2174560427666 MULTI CID FTMS 0 0 0 8104 20761268.0 0.7391776545573785 -2 0.1472206115722656 3 Unmodified _LPHHRVIEV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 18.1463463914782 0.3454829746528889 3 [{I|L}P]H 3 6 21.911 0.0 0.0 1.9944 0.0 0.0 0.0 748.4122739662782 748.4122739662782 3.411290632962718 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.0 0.0 + [{I|L}P]H 1.9944 + + 129 + 1 1.622 50213.9 1.0 2924 5181 8104 HBL1_DMSO_200M_050219_1,8107 HBL1_DMSO_200M_050219_1,8107,LPHHRVIEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8108 42.858 11.0 5050300.0 25 0 483710.0 + 21999 LPHHRVIEV 9 81 550.3220172160127 1098.6294814988253 2 550.3223754763603 MULTI CID FTMS 0 0 0 8104 3613281.75 0.7625603716901752 -2 0.1472206115722656 4 Unmodified _LPPPPILLHC_ ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7|NOMO2 24.67388899826682 0.4143206957119831 3 {I|L}PHH 4 7 55.477 0.0 0.0 5.0497 0.0 0.0 0.0 611.3534639947874 611.3534639947874 43.88357838612024 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 {I|L}PHH 5.0497 - 117 + 1 1.622 48370.7 1.0 2925 5181 8104 HBL1_DMSO_200M_050219_1,8108 HBL1_DMSO_200M_050219_1,8108,LPPPPILLHC False False LPHHRVIEV 42.857747 550.32237547636 763259448.0 8104.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;;nc|ENSG00000185164|Q5JPE7|NOMO2 4.6422913869222 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8109 42.859 15.0 4918100.0 25 0 379180.0 + + 40720 LPRDRQALV 9 60 356.5489358933153 1066.6249782801458 3 356.5486938357353 MULTI CID FTMS 0 0 0 8104 3340919.0 0.983711538515331 -2 0.1472206115722656 5 Unmodified _VLHPRYAIV_ ENST00000513956.5_1_6:41904284-42016364:-|nuORF;nc|ENSG00000112576|P30281-2|CCND3;ENST00000505884.5_1_6:41904922-41997824:-|nuORF;ENSG00000112576|ENST00000372991|CCND3;ENST00000505672.5_1_6:41904922-42016364:-|nuORF;ENST00000511161.5_1_6:41904922-42016364:-|nuORF;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;nc|ENSG00000112576|P30281-3|CCND3 15.847184025352805 0.4077185912009129 3 K{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}V 6 -1 26.225 0.0 0.0 2.4587 0.0 0.0 353.1760426251969 0.0 353.1760426251969 0.0 10.651712939895042 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 K{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}V 2.4587 - 12 1 1.622 71072.5 1.0 2926 5181 8104 HBL1_DMSO_200M_050219_1,8109 HBL1_DMSO_200M_050219_1,8109,VLHPRYAIV False False LPRDRQALV 42.858926 356.548693835735 28783316.0 8104.0 ENST00000513956.5_1_6:41904284-42016364:-|nuORF;;nc|ENSG00000112576|P30281-2|CCND3;;ENST00000505884.5_1_6:41904922-41997824:-|nuORF;;ENSG00000112576|ENST00000372991|CCND3;;ENST00000505672.5_1_6:41904922-42016364:-|nuORF;;ENST00000511161.5_1_6:41904922-42016364:-|nuORF;;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;;nc|ENSG00000112576|P30281-3|CCND3 3.708860397338867 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8110 42.86 21.0 1864100.0 25 0 529300.0 + 38163 TPPTAQVV 8 59 406.729270483487 811.4439880337741 2 406.7291747927666 MULTI CID FTMS 0 0 0 8104 2848532.25 0.8540680093986894 1 -0.0874748229980468 6 Unmodified _TPPTAQVV_ ENSG00000116489|ENST00000263168|CAPZA1;ENST00000466066.1_1_1:113202257-113212751:+|nuORF 53.57557251787612 0.1224291679108181 3 [TP]PATQVV 8 2 + 53.043 0.0 0.0 6.5369 6.5369 81.164 0.0 0.0 0.0 19.39310537078961 37.55834998782142 19.39310537078961 2.218487496163569 0 0.8182503180159344 1.5228787452803376 1.1549471895720984 0.0 [TP]PATQVV;[TP]PTAQVV;[TP]PAQTVV;[TP]PAT[AG]VV;[TP]PTA[AG]VV;[TP]PA[AG]TVV;[TP][QA]PTVV;[AG]A[TP]PTVV;{[VA]|[{I|L}G]}[EP]AQVV;[QA][TP]PTVV 6.5369;6.2635;5.9434;5.3954;5.122;4.802;4.2852;2.8217;2.5115;1.8835 -;+;-;-;-;-;-;-;-;- + 125 1 1.622 37696.1 1.0 2927 5181 8104 HBL1_DMSO_200M_050219_1,8110 HBL1_DMSO_200M_050219_1,8110,TPPTAQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8111 42.861 28.0 1477100.0 25 0 117200.0 + 22656 LPYRDSTQV 9 82 539.7801698219005 1077.5457867106009 2 539.7800781130791 MULTI CID FTMS 0 0 0 8104 2733323.5 0.608900682297946 2 -0.1961593627929687 7 Unmodified _LPYRDSTQV_ ENSG00000134508|ENST00000256925|CABLES1;nc|ENSG00000134508|Q8TDN4-2|CABLES1;nc|ENSG00000134508|Q8TDN4-4|CABLES1 53.832793166522166 0.0319663582346103 3 {I|L}PY 3 6 44.055 0.0 0.0 4.0884 0.0 0.0 0.0 701.3180636041624 701.3180636041624 21.887568628841265 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + {I|L}PY 4.0884 + + 61 + 1 1.622 41239.0 1.0 2928 5181 8104 HBL1_DMSO_200M_050219_1,8111 HBL1_DMSO_200M_050219_1,8111,LPYRDSTQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8112 42.863 60.0 1383900.0 25 0 130740.0 + -1 MPKLGKARLI 10 103 571.8572817906318 1141.7000106480634 2 571.8578369021416 MULTI CID FTMS 0 0 0 8104 1408023.0 0.4846856634181554 2 -0.1961593627929687 8 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 19.256988751693697 0.5244284437930726 3 K{I|L}KQPE 6 -1 53.448 0.0 0.0 4.6815 0.0 0.0 400.2804127423844 0.0 400.2804127423844 0.0 43.26737382129359 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.5 K{I|L}KQPE 4.6815 - 108 1 1.622 68664.8 1.0 2929 5181 8104 HBL1_DMSO_200M_050219_1,8112 HBL1_DMSO_200M_050219_1,8112,MPKLGKARLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8113 42.866 143.0 454180.0 25 0 24660.0 + -1 MQSNKTFN 8 102 506.23135233781625 1010.4481517424324 2 506.2316772341728 MULTI CID FTMS 0 0 0 8104 752550.0625 1.0 0 0.0 9 Carbamidomethyl (C) _QSDKLC(Carbamidomethyl (C))FN_ ENST00000486613.6_1_X:70504267-70513876:+|nuORF;ENSG00000147140|ENST00000276079|NONO;NONO|p.K279Sfs*33|1|0.05|ENSG00000147140|chrX:71296939-71296939|A/-|frameshift_variant 28.486842064014134 0.4448922141344407 3 [WD]SN[KT]{M(Oxidation (M))|F}N 8 -1 + 33.778 0.0 0.0 3.3429 3.3429 80.201 0.0 0.0 0.0 6.989700043360191 12.149392758355171 6.989700043360191 9.262137858390815 0 0.8494850021680094 0.0 0.0 0.2887254899964357 [WD]SN[KT]{M(Oxidation (M))|F}N;[WD]SGG[KT]{M(Oxidation (M))|F}N;[WD]S[KA][SG]{M(Oxidation (M))|F}N;[WD]SN[KT]N{M(Oxidation (M))|F};{[QS]|[NT]}[KS][WD]{M(Oxidation (M))|F}N;{[QN]|[E{I|L}]|[KN]}ST[WD]{M(Oxidation (M))|F}N;[WD]S[KA][YQ]N;[WD]S[QA][YK]N;[WD][PA][YV]{M(Oxidation (M))|F}N;[WD]SGG[KT]N{M(Oxidation (M))|F} 3.3429;2.4262;2.3479;2.1251;1.7698;1.7643;1.671;1.6047;1.5831;1.2085 -;-;-;-;-;-;-;-;-;- 579 + 1 1.622 52139.8 1.0 2930 5181 8104 HBL1_DMSO_200M_050219_1,8113 HBL1_DMSO_200M_050219_1,8113,QSDKLCFN False False MQSNKTFN 42.865641 506.231677234173 2766315.5 8104.0 ENST00000486613.6_1_X:70504267-70513876:+|nuORF;;ENSG00000147140|ENST00000276079|NONO;;NONO|p.K279Sfs*33|1|0.05|ENSG00000147140|chrX:71296939-71296939|A/-|frameshift_variant 5.695920308430989 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8114 42.873 422.0 690130.0 25 0 36417.0 -1 0 115 1115.1629266664377 5570.7782509991885 5 1115.766528308392 MULTI CID FTMS 0 0 0 8104 729874.5625 1.0 0 0.0 10 3 {I|L}PQGPP 6 -1 53.404 0.0 0.0 0.95865 0.0 0.0 1483.715484720189 3494.7576187987465 4978.473103518935 0.0 0.0 0.0 0.0 0 1.924742501084005 0.0 0.0 0.0 {I|L}PQGPP 0.95865 - 668 + 1 1.622 180946.8 1.0 2931 5181 8104 HBL1_DMSO_200M_050219_1,8114 HBL1_DMSO_200M_050219_1,8114, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8115 42.876 122.0 1073000.0 25 0 303130.0 + 19585 LFVYWKIV 8 111 534.3196642235563 1066.6247755139125 2 534.3194457888603 MULTI CID FTMS 0 0 0 8104 674377.625 0.9652027427752754 -1 0.076995849609375 11 Unmodified _LFVYWKIV_ REV__ENSG00000185344|ENST00000330342|ATP6V0A2 21.74664581756881 0.5868176546531598 3 {I|L}[RP]D 4 -1 21.682 0.0 0.0 2.0328 0.0 0.0 0.0 582.3346651666624 582.3346651666624 4.69273760456403 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3494850021680094 {I|L}[RP]D 2.0328 - 151 + 1 1.622 105197.2 1.0 2932 5181 8104 HBL1_DMSO_200M_050219_1,8115 HBL1_DMSO_200M_050219_1,8115,LFVYWKIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8116 42.878 125.0 698860.0 25 0 93367.0 + -1 SYISDGKEY 9 111 531.242639469424 530.235363002824 1 531.2433349490166 MULTI CID FTMS 0 0 0 8104 495302.65625 1.0 0 0.0 12 ENSG00000197081|ENST00000356956|IGF2R 3 TEDG 4 -1 19.456 0.0 0.0 3.6694 0.0 0.0 0.0 125.07251917056875 125.07251917056875 3.482587709797329 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TEDG 3.6694 - 82 + 1 1.622 71249.2 1.0 2933 5181 8104 HBL1_DMSO_200M_050219_1,8116 HBL1_DMSO_200M_050219_1,8116, False False SYISDGKEY 42.878306 531.243334949017 1689711.5 8104.0 ENSG00000197081|ENST00000356956|IGF2R 6.3684767087300616 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8117 42.881 102.0 836910.0 25 0 45181.0 + 657 AELTGQCWIT 10 124 561.2699823263109 1120.5254117194218 2 561.2694579958916 MULTI CID FTMS 0 0 0 8104 550393.75 1.0 0 0.0 13 Unmodified _AELTGQCWIT_ REV__ENSG00000186818|ENST00000695418|LILRB4;REV__ENSG00000239961|ENST00000291759|LILRA4;REV__nc|ENSG00000186818|Q8NHJ6-2|LILRB4;REV__nc|ENSG00000186818|Q8NHJ6-3|LILRB4;REV__nc|ENSG00000186818|Q8NHJ6|LILRB4 20.580933911654288 0.5022139299129796 3 {[CP]|[EA]}{I|L}T{M(Oxidation (M))|F} 5 -1 22.461 0.0 0.0 2.0045 0.0 0.0 0.0 556.2551229833467 556.2551229833467 -1.1503517085990111 0.0 -1.1503517085990111 0.0 0 0.5 0.5086383061657274 0.9978499570595204 0.0 {[CP]|[EA]}{I|L}T{M(Oxidation (M))|F} 2.0045 - 386 1 1.622 71724.8 1.0 2934 5181 8104 HBL1_DMSO_200M_050219_1,8117 HBL1_DMSO_200M_050219_1,8117,AELTGQCWIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8118 42.892 648.0 84444.0 25 0 15270.0 -1 0 42 1129.124633559678 3384.352071279234 3 1130.126025378704 MULTI CID FTMS 0 0 0 8104 337949.71875 0.4300231601288862 2 -0.1961593627929687 14 3 E 1 -1 6.9897 0.0 0.0 0.20653 0.0 0.0 2728.123481861316 524.1616699992811 3252.2851518605967 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20653 - 7 + 1 1.622 51290.2 1.0 2935 5181 8104 HBL1_DMSO_200M_050219_1,8118 HBL1_DMSO_200M_050219_1,8118, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8119 42.901 497.0 599980.0 25 0 41797.0 26047 NMNPRWHCGKT 11 142 672.3091783053953 1342.6038036775906 2 672.3070556521416 MULTI CID FTMS 0 0 0 8104 331279.5625 0.4382106232617818 -2 0.1472206115722656 15 Unmodified _NMNPRWHCGKT_ ENST00000514558.5_1_4:159133187-159133286:+|nuORF 21.53697664764585 0.586507868110548 3 [MN]PN{I|L}NADQ 9 8 97.009 0.0 0.0 7.2254 0.0 0.0 0.0 342.1537231068557 342.1537231068557 31.90589245800104 0.0 0.0 0.0 0 1.055462187404089 1.5228787452803376 0.6382104921644451 1.960409376976188 [MN]PN{I|L}NADQ 7.2254 - 4694 + 1 1.622 213518.2 1.0 2936 5181 8104 HBL1_DMSO_200M_050219_1,8119 HBL1_DMSO_200M_050219_1,8119,NMNPRWHCGKT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8120 42.909 494.0 235330.0 25 0 18167.0 -1 EGMNIVETME 10 139 584.7491263866439 1167.4836998400876 2 584.7493163943291 MULTI CID FTMS 0 0 0 8104 270658.53125 1.0 0 0.0 16 Oxidation (M) _EGMNIVETM(Oxidation (M))E_ ENST00000557282.1_1_12:98984503-98984704:-|nuORF 20.41453444215458 0.5050059513928961 3 {[DA]|[EG]}MQG[KC]V{[DS]|[MA]|[CV]|TT}D 11 -1 + 48.974 0.0 0.0 4.1948 4.1948 72.871 0.0 0.0 0.0 2.4318882380395834 19.31559768863007 2.4318882380395834 1.804560644581308 0 1.8807196863200843 2.0 0.0 0.0 {[DA]|[EG]}MQG[KC]V{[DS]|[MA]|[CV]|TT}D;{[DA]|[EG]}MQ[C(Carbamidomethyl (C))K]V{[DS]|[MA]|[CV]|TT}D;{[DA]|[EG]}[{I|L}A]T{M(Oxidation (M))|F}VMWD;WMQ[MT]R{[C(Carbamidomethyl (C))G]|[NC]}V;{[DA]|[EG]}[VS]V{M(Oxidation (M))|F}VMWD;WMQ[MT]C[RN]V;{[DA]|[EG]}[{I|L}A]T{M(Oxidation (M))|F}VD{[DS]|[MA]|[CV]|TT}D;[VP]Q{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VMWD;WM{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VR{[C(Carbamidomethyl (C))G]|[NC]}V;{[DA]|[EG]}[{I|L}A]T{M(Oxidation (M))|F}VM{[DA]|[EG]}D 4.1948;4.0403;3.7011;3.6868;3.2178;3.1869;3.1061;2.9648;2.952;2.9161 -;-;-;-;-;-;-;-;-;- 1605 1 1.622 88966.5 1.0 2937 5181 8104 HBL1_DMSO_200M_050219_1,8120 HBL1_DMSO_200M_050219_1,8120,EGMNIVETME False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8121 42.918 513.0 285350.0 25 0 29893.0 + 18188 KVADSKTLLES 11 146 595.8348255747808 1189.6550982163617 2 595.8356201052666 MULTI CID FTMS 0 0 0 8104 243705.765625 0.701889036222338 -2 0.1472206115722656 17 Unmodified _KVADSKTLLES_ ENSG00000104889|ENST00000221486|RNASEH2A;ENST00000590121.1_1_19:12917502-12918326:+|nuORF;ENST00000590279.1_1_19:12917826-12918144:+|nuORF 78.11562728322046 0.0090580243971617 3 KVADAKPNAPD 11 6 66.046 0.0 0.0 5.5517 0.0 0.0 0.0 80.05130182437733 80.05130182437733 23.91426363575662 0.0 0.0 0.0 0 1.9489700043360187 0.6777807052660807 0.9124379954164592 0.0 KVADAKPNAPD 5.5517 - 7077 + 1 1.622 109328.3 1.0 2938 5181 8104 HBL1_DMSO_200M_050219_1,8121 HBL1_DMSO_200M_050219_1,8121,KVADSKTLLES True True KVADSKTLLES 42.91841 595.835620105267 3239661.0 8104.0 ENST00000590279.1_1_19:12917826-12918144:+|nuORF;;ENSG00000104889|ENST00000221486|RNASEH2A;;ENST00000590121.1_1_19:12917502-12918326:+|nuORF 6.542741139729817 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8122 42.932 744.0 279010.0 25 0 29896.0 -1 VEACAAHAGP 10 223 342.1545223634542 0 342.1663696169853 PEAK CID FTMS 0 0 0 8104 66984.546875 0.8194613054499293 -3 0.2182464599609375 18 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))VEAC(Carbamidomethyl (C))AAHAGP_ ENST00000308508.5_1_15:75982023-75982062:-|nuORF 3.876331618118854 0.3961065659209837 3 Q 1 -1 5.4846 0.0 0.0 0.80384 0.0 0.0 469.1463727524959 82.06697260074452 551.2133453532404 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.80384 - 9 + 1 1.622 169705.8 1.0 2939 5181 8104 HBL1_DMSO_200M_050219_1,8122 HBL1_DMSO_200M_050219_1,8122,VEACAAHAGP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8123 42.937 270.0 248660.0 25 0 38625.0 + 12954 HAGQGEPG 8 96 376.6692514040491 751.3239498748982 2 376.6693908572197 MULTI CID FTMS 0 0 0 8104 159088.84375 1.0 0 0.0 19 Unmodified _HAGQGEPG_ REV__ENST00000339526.8_1_1:182360015-182360324:-|nuORF 2.577480529830294 0.808687252328423 3 W 1 -1 14.604 0.0 0.0 1.9438 0.0 0.0 547.2334632799748 0.0 547.2334632799748 0.0 3.7666383332930575 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.9438 - 52 + 1 1.622 58971.9 1.0 2940 5181 8104 HBL1_DMSO_200M_050219_1,8123 HBL1_DMSO_200M_050219_1,8123,HAGQGEPG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8125 42.942 3.5 5356400.0 25 0 442180.0 + 26602 NVPWTRTI 8 49 493.77244556917225 985.5303382051444 2 493.7727538943291 MULTI CID FTMS 0 0 0 8124 10819835.0 0.2500257424144684 2 -0.2057228088378906 1 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 13.50788311687929 0.7113601687236069 3 VGNT{I|L} 5 -1 25.643 0.0 0.0 2.602 0.0 0.0 483.2544422834 0.0 483.2544422834 0.0 12.148415687162952 0.0 0.0 0 0.6435078169319297 0.0 0.0 0.0 VGNT{I|L} 2.602 - 37 1 1.615 22473.5 1.0 2941 5182 8124 HBL1_DMSO_200M_050219_1,8125 HBL1_DMSO_200M_050219_1,8125,NVPWTRTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8126 42.943 18.0 2020600.0 25 0 239180.0 + 32279 RWPKKSAEF 9 73 383.5450870782333 1147.6134318349 3 383.5449096560478 MULTI CID FTMS 0 0 0 8124 2429265.5 0.6224159526041956 1 -0.1086845397949218 2 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 13.042465956692816 0.4836390050082244 3 [WR][KP]K{[WT]|[RM]}{M(Oxidation (M))|F} 8 3 + 22.14 0.0 0.0 1.9292 1.9292 71.887 0.0 0.0 0.0 0.4575749056067479 17.53591878376909 0.4575749056067479 3.9794000867203714 0 0.8494850021680094 0.0 0.0 0.0 [WR][KP]K{[WT]|[RM]}{M(Oxidation (M))|F};[KP][WR]K{[WT]|[RM]}{M(Oxidation (M))|F};[WR][KP]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CA]|SS};[KP][WR]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CA]|SS} 1.9292;1.5825;0.48972;0.14297 -;-;-;- 47 1 1.615 33683.2 1.0 2942 5182 8124 HBL1_DMSO_200M_050219_1,8126 HBL1_DMSO_200M_050219_1,8126,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8127 42.944 29.0 1935200.0 25 0 225080.0 + 5782 DPPPGSHVI 9 83 459.7369120917008 917.4592712502016 2 459.7376891970634 MULTI CID FTMS 0 0 0 8124 1696313.25 0.0676169740996684 12 -0.8080101013183594 3 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 28.486842064014134 0.1687311288560894 3 [DP]P[PA]P{I|L}[DP] 9 5 + 46.149 0.0 0.0 5.0301 5.0301 78.221 0.0 0.0 0.0 6.444021793654855 26.30597159536684 6.444021793654855 3.4678748622465605 0 1.0 2.0 0.3807196863200844 0.0 [DP]P[PA]P{I|L}[DP];[DP]P[HK]{I|L}[DP];[DP][HK]P{I|L}[DP];[DP][{M(Oxidation (M))|F}V][QT]{I|L}V;[DP][{M(Oxidation (M))|F}V][QT]V{I|L};{[ET]|[MV]}{I|L}VP{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V;[PS][YQ]V{I|L}[DP];{[ET]|[MV]}{I|L}P[PA][YQ];{[ET]|[MV]}{I|L}PV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V;{[ET]|[MV]}{I|L}[HK][YQ] 5.0301;4.6521;3.364;2.37;1.9689;1.6428;1.6283;1.5122;1.3147;1.1417 -;-;-;-;-;-;-;-;-;- 204 1 1.615 49776.8 1.0 2943 5182 8124 HBL1_DMSO_200M_050219_1,8127 HBL1_DMSO_200M_050219_1,8127,DPPPGSHVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8128 42.946 80.0 1951300.0 25 0 431690.0 + 3980 DALRKIRAV 9 103 347.88928995644744 1040.6460404695424 3 347.8890869021416 MULTI CID FTMS 0 0 0 8124 693302.1875 0.2399112291458176 -1 0.0874748229980468 4 Unmodified _DALRKIRAV_ ENSG00000155827|ENST00000389120|RNF20 49.52724829834842 0.0414064571532091 3 DA{I|L}RK{I|L}RAV 9 0 + 87.244 0.0 0.0 8.3837 8.3837 97.493 0.0 0.0 0.0 57.55159618480528 9.319686641160075 9.319686641160075 36.53720958383822 0 1.1307196863200843 2.0 0.0 1.110924374808178 + + DA{I|L}RK{I|L}RAV;WV{[VA]|[{I|L}G]}K{I|L}RAV;W{I|L}[VG]K{I|L}RAV;V{[CP]|[EA]}RK{I|L}RAV;VW{[VA]|[{I|L}G]}K{I|L}RAV 8.3837;4.8727;4.6134;3.905;3.8517 +;-;-;-;- + 147 + 1 1.615 127889.0 1.0 2944 5182 8124 HBL1_DMSO_200M_050219_1,8128 HBL1_DMSO_200M_050219_1,8128,DALRKIRAV True True DALRKIRAV 42.945853 347.889086902142 13935423.0 8124.0 ENSG00000155827|ENST00000389120|RNF20 4.640422503153483 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8129 42.95 219.0 701010.0 25 0 52803.0 + -1 VGMNAFCI 8 130 435.6974484236197 869.3803439140395 2 435.6977722048759 MULTI CID FTMS 0 0 0 8124 540925.0 0.3560947675859129 2 -0.2057228088378906 5 Oxidation (M) _VGM(Oxidation (M))NAFCI_ REV__ENSG00000036565|ENST00000276373|SLC18A1;REV__nc|ENSG00000036565|P54219-2|SLC18A1 5.760428011301431 0.7893668129297577 3 {I|L}T 2 -1 16.203 0.0 0.0 1.8637 0.0 0.0 0.0 652.2279769242475 652.2279769242475 5.405826925765904 0.0 0.0 0.0 0 0.2134679910804404 0.0 0.0 0.0 {I|L}T 1.8637 - 318 + 1 1.615 123832.3 1.0 2945 5182 8124 HBL1_DMSO_200M_050219_1,8129 HBL1_DMSO_200M_050219_1,8129,VGMNAFCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8130 42.952 95.0 801770.0 25 0 99604.0 + + 39864 IPMDDFLGA 9 92 489.7356837106689 977.456814488138 2 489.7361022830009 MULTI CID FTMS 0 0 0 8124 531417.125 0.1289348081343741 2 -0.2057228088378906 6 Unmodified _VFIEMPDQ_ ENST00000256689.9_1_12:46752655-46752838:-|nuORF 24.67388899826682 0.525179942228231 3 AA{M(Oxidation (M))|F}QWD{I|L}Q 8 -1 + 42.055 0.0 0.0 4.3025 4.3025 77.129 0.0 0.0 0.0 5.380300893529579 28.52494675138315 5.380300893529579 4.490925311194182 0 1.0 0.8860566476931632 0.0 0.0 AA{M(Oxidation (M))|F}QWD{I|L}Q;AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DG{M(Oxidation (M))|F}{I|L}Q;{[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[WT]|[RM]}SD[QT]{I|L}Q;{[CA]|SS}{I|L}SWRDQ;{[C(Carbamidomethyl (C))E]|[WC]}{I|L}S[QT]{I|L}Q;{[CA]|SS}{I|L}D[C(Carbamidomethyl (C))R]{I|L}Q;{[WT]|[RM]}DS[QT]{I|L}Q;AA{M(Oxidation (M))|F}[AG]WD{I|L}Q;{[CA]|SS}S{I|L}W[RD]Q 4.3025;3.8431;3.7259;3.6736;3.5895;3.5458;3.5458;3.3656;3.3549;3.1387 -;-;-;-;-;-;-;-;-;- 689 1 1.615 62158.6 1.0 2946 5182 8124 HBL1_DMSO_200M_050219_1,8130 HBL1_DMSO_200M_050219_1,8130,VFIEMPDQ False False IPMDDFLGA 42.952049 489.736102283001 22817020.0 8124.0 ENST00000256689.9_1_12:46752655-46752838:-|nuORF 3.461455980936686 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8131 42.96 459.0 619910.0 25 0 29013.0 + 26299 NQWDGTQHGV 10 194 571.2546236114295 1140.4946942896588 2 571.2548095583916 MULTI CID FTMS 0 0 0 8124 474517.53125 0.7277424895139268 1 -0.1086845397949218 7 Unmodified _NQWDGTQHGV_ ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;nc|ENSG00000152818|P46939-4|UTRN 66.45667989310934 0.0196491505995134 3 KQTGDW[HS] 8 7 46.935 0.0 0.0 4.1153 0.0 0.0 183.06530959297032 0.0 183.06530959297032 0.0 18.887527310251755 0.0 0.0 0 0.8807196863200843 0.0 0.9802046884880938 0.9247425010840048 KQTGDW[HS] 4.1153 - 6791 1 1.615 210627.9 1.0 2947 5182 8124 HBL1_DMSO_200M_050219_1,8131 HBL1_DMSO_200M_050219_1,8131,NQWDGTQHGV True True NQWDGTQHGV 42.960197 571.254809558392 8380243.0 8124.0 nc|ENSG00000152818|P46939-2|UTRN;;nc|ENSG00000152818|P46939-4|UTRN;;ENSG00000152818|ENST00000367545|UTRN 7.123006661732991 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8132 42.963 113.0 1279700.0 25 0 140890.0 + 32566 SASGPLHSV 9 150 427.7224685211359 853.4303841090718 2 427.7229186892509 MULTI CID FTMS 0 0 0 8124 471262.0625 0.4210424364175186 -1 0.0874748229980468 8 Unmodified _SASGPLHSV_ ENSG00000166025|ENST00000433060|AMOTL1;nc|ENSG00000166025|Q8IY63-2|AMOTL1 36.12702656103203 0.0967173616627612 3 {[SA]|[TG]}S 3 6 33.394 0.0 0.0 3.9129 0.0 0.0 0.0 605.3060151728015 605.3060151728015 4.162062477927435 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.341129063296272 0.0 + {[SA]|[TG]}S 3.9129 + + 393 1 1.615 114834.7 1.0 2948 5182 8124 HBL1_DMSO_200M_050219_1,8132 HBL1_DMSO_200M_050219_1,8132,SASGPLHSV True True SASGPLHSV 42.962557 427.722918689251 8752907.0 8124.0 ENSG00000166025|ENST00000433060|AMOTL1;;nc|ENSG00000166025|Q8IY63-2|AMOTL1 6.5671318372090655 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8133 42.973 610.0 261150.0 25 0 22675.0 -1 IPNPCLALPV 10 148 547.3062212689401 1092.5978896046802 2 547.8061401247978 MULTI CID FTMS 0 0 0 8124 287664.34375 1.0 0 0.0 9 Carbamidomethyl (C) _IPNPC(Carbamidomethyl (C))LALPV_ ENSG00000205143|ENST00000378909|ARID3C 36.04419817259434 0.1993394420055842 3 [{I|L}P]NPTK[NP]NV 10 -1 + 55.02 0.0 0.0 5.0357 5.0357 82.47 0.0 0.0 0.0 17.804920779080987 4.150902817734576 4.150902817734576 7.434764440442393 0 1.1549471895720984 1.6989700043360187 0.0 0.8556270500406937 [{I|L}P]NPTK[NP]NV;[{I|L}P]NPTKQQ[PA];[{I|L}P]GGPTK[NP]NV;[{I|L}P]NPTK[NP]GGV;[{I|L}P]NP[KC]K{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}P]GGPTKQQ[PA];[{I|L}P]NPT[R{I|L}]D[PA];[{I|L}P]GGP[KC]K{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}P]N[KC]PK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}P]NPT[VS][TP][PA] 5.0357;4.3552;4.1969;4.0418;3.57;3.5164;2.8824;2.7272;2.6547;2.5685 -;-;-;-;-;-;-;-;-;- 1739 + 1 1.615 133997.1 1.0 2949 5182 8124 HBL1_DMSO_200M_050219_1,8133 HBL1_DMSO_200M_050219_1,8133,IPNPCLALPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8134 42.985 682.0 338260.0 25 0 22711.0 + 36205 SVWGQRSPSSK 11 162 609.8147031249038 1217.6148533166074 2 609.8154785037041 MULTI CID FTMS 0 0 0 8124 225099.5 0.7550349049286178 -1 0.0874748229980468 10 Unmodified _SVWGQRSPSSK_ REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN 23.78978130925829 0.5336113198261219 3 [VG]Q[WK]DPSQS 10 -1 76.124 0.0 0.0 6.2519 0.0 0.0 0.0 102.05552839611929 102.05552839611929 32.986540098078535 0.0 0.0 0.0 0 1.1549471895720984 1.154901959985743 1.5669015600442575 1.274227503252014 [VG]Q[WK]DPSQS 6.2519 - 4070 1 1.615 170924.8 1.0 2950 5182 8124 HBL1_DMSO_200M_050219_1,8134 HBL1_DMSO_200M_050219_1,8134,SVWGQRSPSSK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8135 42.989 230.0 234390.0 25 0 25525.0 2038 APHPEAEALP 10 102 516.2612826054385 1030.508012277677 2 516.7628661990166 MULTI CID FTMS 0 0 0 8124 173536.453125 0.2574359343086585 2 -0.2057228088378906 11 Unmodified _APHPEAEALP_ ENSG00000177673|ENST00000313965|TEX44 7.289230182591677 0.6929195370588109 3 T 1 10 10.485 0.0 0.0 1.0174 0.0 0.0 246.16159001380817 680.2781466119749 926.4397366257832 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 T 1.0174 - 85 + 1 1.615 48173.3 1.0 2951 5182 8124 HBL1_DMSO_200M_050219_1,8135 HBL1_DMSO_200M_050219_1,8135,APHPEAEALP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8136 43.003 800.0 306590.0 25 0 36048.0 + 30065 QVASTLKQV 9 252 487.2877664579004 972.5609799826008 2 487.2871276736259 MULTI CID FTMS 0 0 0 8124 177647.515625 1.0 0 0.0 12 Unmodified _QVASTLKQV_ ENSG00000166295|ENST00000299381|ANAPC16 106.94017166704064 0.0073169432358171 3 {[QV]|[N{I|L}]|[RA]|[KV]}AST{I|L}KQV 9 0 + 60.216 0.0 0.0 6.1914 6.1914 89.304 0.0 0.0 0.0 17.501035505310888 6.596631822760614 6.596631822760614 9.969165662315689 0 1.9846368802282013 2.0 1.2887254899964358 0.6109243748081782 + + {[QV]|[N{I|L}]|[RA]|[KV]}AST{I|L}KQV;{[QV]|[N{I|L}]|[RA]|[KV]}AST[RN]VV;{[QV]|[N{I|L}]|[RA]|[KV]}EM[R{I|L}]VV;[VG]AAST{I|L}KQV;{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}KQV;[AG]VAST{I|L}KQV;[{I|L}A]NST{I|L}KQV;{[QV]|[N{I|L}]|[RA]|[KV]}A{[VA]|[{I|L}G]}[C(Carbamidomethyl (C))K]VV;[Q{I|L}]GST{I|L}KQV;{[SA]|[TG]}[{I|L}T][KQ]VQV 6.1914;5.1664;4.5031;4.392;3.9315;3.7765;3.7623;3.6584;3.6508;3.5577 +;-;-;-;-;-;-;-;-;- + 3194 1 1.615 184434.6 0.9900000095367432 2952 5182 8124 HBL1_DMSO_200M_050219_1,8136 HBL1_DMSO_200M_050219_1,8136,QVASTLKQV True True QVASTLKQV 43.003236 487.287127673626 815677.5 8124.0 ENSG00000166295|ENST00000299381|ANAPC16 6.014775276184082 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8137 43.017 800.0 495810.0 25 0 42013.0 + 36597 TANRHVLRI 9 321 360.5527861467497 1078.6365290404492 3 360.5532409548759 MULTI CID FTMS 0 0 0 8124 163430.265625 0.368085743422182 1 -0.1086845397949218 13 Unmodified _TANRHVLRI_ ENSG00000102699|ENST00000381989|PARP4 32.89776655970281 0.1144444835665315 3 TA[RN]HV{I|L}R{I|L} 9 0 + 51.907 0.0 0.0 4.8122 4.8122 73.937 0.0 0.0 0.0 17.124867165224494 1.3035911088712666 1.3035911088712666 1.3035911088712666 0 1.3070370136990015 1.3010299956639813 0.0 0.6747425010840047 + + TA[RN]HV{I|L}R{I|L};TA[RN]HV{I|L}{I|L}R;T{I|L}VEHV{I|L}R{I|L};TA[RN]H[R{I|L}]V{I|L};TA[RN][{I|L}V]HR{I|L};T{I|L}VEHV{I|L}{I|L}R;TA[RN][{I|L}V]H{I|L}R;TA[RN]H[R{I|L}]{I|L}V;{I|L}TVEHV{I|L}R{I|L};{I|L}TVEHV{I|L}{I|L}R 4.8122;4.6914;3.7333;3.6795;3.6345;3.6124;3.5137;3.4125;3.2246;3.1037 +;-;-;-;-;-;-;-;-;- + 1768 + 1 1.615 315593.6 0.8100000023841858 2953 5182 8124 HBL1_DMSO_200M_050219_1,8137 HBL1_DMSO_200M_050219_1,8137,TANRHVLRI True True TANRHVLRI 43.017051 360.553240954876 2285270.0 8124.0 ENSG00000102699|ENST00000381989|PARP4 1.698157747586568 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8138 43.032 800.0 225460.0 25 0 8627.8 + 44463 YNDNVCELNAF 11 159 651.2798761133399 1300.5451992934798 2 651.2817260622978 MULTI CID FTMS 0 0 0 8124 107955.421875 0.4498225455586193 -1 0.0874748229980468 14 Unmodified _YNDNVCELNAF_ REV__ENSG00000183765|ENST00000404276|CHEK2;REV__nc|ENSG00000183765|O96017-10|CHEK2;REV__nc|ENSG00000183765|O96017-12|CHEK2;REV__nc|ENSG00000183765|O96017-2|CHEK2;REV__nc|ENSG00000183765|O96017-5|CHEK2;REV__nc|ENSG00000183765|O96017-6|CHEK2;REV__nc|ENSG00000183765|O96017-7|CHEK2;REV__nc|ENSG00000183765|O96017-8|CHEK2 24.99096001346401 0.505407273373304 3 [AG]NHDEAQAGNA{M(Oxidation (M))|F} 13 -1 + 115.59 0.0 0.0 8.8874 8.8874 83.638 0.0 0.0 0.0 0.7918124604762511 16.642078980768062 0.7918124604762511 0.7918124604762511 0 1.0356668758921828 1.6989700043360187 0.5796896906561032 2.447621246364342 [AG]NHDEAQAGNA{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQAGNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}HDEAQAGNA{M(Oxidation (M))|F};[AG]NHDEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQQNA{M(Oxidation (M))|F};[AG]GGHDEAQAGNA{M(Oxidation (M))|F};[AG]NHDEAQAGAN{M(Oxidation (M))|F};[AG]NHDEAQAGGGA{M(Oxidation (M))|F};[AG]NHDEA[AG]AGNA{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQAGAN{M(Oxidation (M))|F} 8.8874;8.8266;8.6488;8.3767;8.3158;8.3134;8.2156;8.1899;8.1899;8.1548 -;-;-;-;-;-;-;-;-;- 19747 1 1.615 132185.8 0.8999999761581421 2954 5182 8124 HBL1_DMSO_200M_050219_1,8138 HBL1_DMSO_200M_050219_1,8138,YNDNVCELNAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8139 43.046 800.0 51246.0 25 0 1699.7 28966 QDKRLWVLHLK 11 89 718.4297973513603 0 718.4297973513603 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _QDKRLWVLHLK_ ENSG00000120278|ENST00000696526|PLEKHG1 2.498486711656943 0.4761840153648598 3 AA 2 11 7.9588 0.0 0.0 0.55468 0.0 0.0 1066.6755909411986 223.0731600397094 1289.748750980908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AA 0.55468 - 84 + 1 1.615 33758.1 0.8199999928474426 2955 5182 8124 HBL1_DMSO_200M_050219_1,8139 HBL1_DMSO_200M_050219_1,8139,QDKRLWVLHLK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8141 43.051 68.0 998480.0 25 0 155340.0 + 43011 VVYGGKSTI 9 80 462.2633370071416 922.5121210810833 2 462.2638427615166 MULTI CID FTMS 0 0 0 8140 942708.1875 0.0185154044293286 6 -0.4590873718261719 1 Unmodified _VVYGGKSTI_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54631532-54634860:+|nuORF 12.240655878213236 0.5053430591993562 3 VVYRYGGG 8 6 48.07 0.0 0.0 5.2108 0.0 0.0 0.0 68.05139337711171 68.05139337711171 36.832750158095 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VVYRYGGG 5.2108 - 198 + 1 1.607 56958.4 1.0 2956 5183 8140 HBL1_DMSO_200M_050219_1,8141 HBL1_DMSO_200M_050219_1,8141,VVYGGKSTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8142 43.053 102.0 655430.0 25 0 86830.0 + 23803 LVDSNNPKI 9 86 500.27680301956775 998.5390531059356 2 500.2776061892509 MULTI CID FTMS 0 0 0 8140 646346.4375 0.4589414731900123 4 -0.2837181091308594 2 Unmodified _LVDSNNPKI_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928-2|POLR2A;nc|ENSG00000181222|P24928|POLR2A 36.12702656103203 0.0967173616627612 3 {I|L}VD[NS]N 6 3 51.49 0.0 0.0 5.1565 0.0 0.0 0.0 353.22025397909755 353.22025397909755 39.27108148272637 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.75 0.3807196863200844 + {I|L}VD[NS]N 5.1565 + + 178 + 1 1.607 54815.7 1.0 2957 5183 8140 HBL1_DMSO_200M_050219_1,8142 HBL1_DMSO_200M_050219_1,8142,LVDSNNPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8143 43.054 30.0 1903500.0 25 0 266410.0 + 6807 EEAPSRPAL 9 63 485.25352147984665 968.4924900264932 2 485.2539245486259 MULTI CID FTMS 0 0 0 8140 2185002.25 0.2407332396402733 -1 0.1086845397949218 3 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 43.85829265575387 0.0542763391141878 3 EEAPSR[PA]{I|L} 9 0 + 47.017 0.0 0.0 4.8546 4.8546 87.956 0.0 0.0 0.0 35.233805212551644 0.6683417370659939 0.6683417370659939 47.01654183012071 0 0.4247425010840047 1.5228787452803376 0.6861818737241735 0.0 + + EEAPSR[PA]{I|L} 4.8546 + + 92 + 1 1.607 48070.4 1.0 2958 5183 8140 HBL1_DMSO_200M_050219_1,8143 HBL1_DMSO_200M_050219_1,8143,EEAPSRPAL True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8144 43.056 28.0 3026000.0 25 0 424520.0 + 21988 LPPPGVRKI 9 71 326.2149630110197 975.6230596332592 3 326.2148925662041 MULTI CID FTMS 0 0 0 8140 1872426.0 0.6494772975300244 -8 0.7112503051757812 4 Unmodified _LPPPGVRKI_ ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54566383-54570502:-|nuORF 20.453626601364224 0.2830276176381075 3 {I|L}PPPG 5 4 55.745 0.0 0.0 5.7138 0.0 0.0 0.0 511.33503137759993 511.33503137759993 44.776296993281406 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}PPPG 5.7138 + + 48 + 1 1.607 71989.7 1.0 2959 5183 8140 HBL1_DMSO_200M_050219_1,8144 HBL1_DMSO_200M_050219_1,8144,LPPPGVRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8145 43.057 30.0 1736500.0 25 0 116300.0 + 32314 RYIGKTMDY 9 88 573.783981090504 1145.5534092478078 2 573.7845947146416 MULTI CID FTMS 0 0 0 8140 1593468.5 0.3136825892681819 -1 0.1086845397949218 5 Unmodified _RYIGKTMDY_ ENSG00000143314|ENST00000361531|MRPL24;ENST00000478899.1_1_1:156707192-156707995:-|nuORF 43.77239144664712 0.0547478964384323 3 [YR]{I|L}GKTMDY 9 0 + 60.684 0.0 0.0 5.2974 5.2974 89.758 0.0 0.0 0.0 3.2568864632742844 41.89896278884483 3.2568864632742844 60.68426893869692 0 1.2614393726401687 0.0 0.4247425010840047 0.0 + + [YR]{I|L}GKTMDY 5.2974 + + 112 1 1.607 45187.7 1.0 2960 5183 8140 HBL1_DMSO_200M_050219_1,8145 HBL1_DMSO_200M_050219_1,8145,RYIGKTMDY True True RYIGKTMDY 43.056786 573.784594714642 22134864.0 8140.0 ENSG00000143314|ENST00000361531|MRPL24;;ENST00000478899.1_1_1:156707192-156707995:-|nuORF 8.362016995747885 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8146 43.06 173.0 500390.0 25 0 70410.0 14268 IEGGTLKD 8 72 832.4409955419268 831.4337190753267 1 834.4472534060478 MULTI CID FTMS 0 0 0 8140 601975.3125 0.0605464178737137 4 -0.2837181091308594 6 Unmodified _IEGGTLKD_ ENSG00000182541|ENST00000331728|LIMK2;nc|ENSG00000182541|P53671-2|LIMK2;nc|ENSG00000182541|P53671-3|LIMK2 16.942295170755138 0.6606234159769251 3 M{I|L}TN[QP] 6 7 16.52 0.0 0.0 1.987 0.0 0.0 129.08943304192672 0.0 129.08943304192672 0.0 1.5769434484380866 0.0 0.0 0 0.3494850021680094 0.0 1.1421590589602533 0.0 M{I|L}TN[QP] 1.987 - 622 + 1 1.607 64520.1 1.0 2961 5183 8140 HBL1_DMSO_200M_050219_1,8146 HBL1_DMSO_200M_050219_1,8146,IEGGTLKD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8147 43.062 75.0 832150.0 25 0 116320.0 + 10631 FVNQHLCGS 9 83 502.7343749017272 1003.4541968702543 2 502.7347289919853 MULTI CID FTMS 0 0 0 8140 553955.6875 0.6705989069513469 -1 0.1086845397949218 7 Unmodified _FVNQHLCGS_ ENSG00000129965|ENST00000397270|INS-IGF2;ENSG00000254647|ENST00000381330|INS 14.838274106304384 0.4350285940865338 3 GC{I|L}HHS 6 7 16.203 0.0 0.0 1.6147 0.0 0.0 351.1788195282607 0.0 351.1788195282607 0.0 3.997972112521923 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 GC{I|L}HHS 1.6147 - 46 + 1 1.607 52553.7 1.0 2962 5183 8140 HBL1_DMSO_200M_050219_1,8147 HBL1_DMSO_200M_050219_1,8147,FVNQHLCGS False True FVNQHLCGS 43.061917 502.734728991985 3629081.5 8140.0 ENSG00000254647|ENST00000381330|INS;;ENSG00000129965|ENST00000397270|INS-IGF2 4.149223804473877 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8148 43.065 170.0 468320.0 25 0 66288.0 + + 37978 YYPDGNSQY 9 114 553.724360109036 1105.4341672848718 2 553.7248412966728 MULTI CID FTMS 0 0 0 8140 518320.625 0.1295084247712298 -10 0.9008216857910156 8 Unmodified _TNEYVCTNY_ nc|ENSG00000141380|Q15532-2|SS18 22.736283301280096 0.2418982879461534 3 YYGSQYYY 8 -1 + 62.259 0.0 0.0 5.6321 5.6321 82.83 0.0 0.0 0.0 5.713045223781869 7.786596949921218 5.713045223781869 5.713045223781869 0 0.8182503180159344 2.0 0.6694451763165201 0.6747425010840047 YYGSQYYY;[DP]NGSQYYY;[DP]GGGSQYYY;[DP]GNSQYYY;[DP]NGS[AG]YYY;YYGS[AG]YYY;[DP]GNS[AG]YYY;[DP]GGGS[AG]YYY;YYGY{[QS]|[NT]}YY;[PS]NGDQYYY 5.6321;5.1153;4.6972;4.5037;4.2823;4.1838;3.6707;3.2578;3.2443;2.8987 -;-;-;-;-;-;-;-;-;- 729 1 1.607 61796.9 1.0 2963 5183 8140 HBL1_DMSO_200M_050219_1,8148 HBL1_DMSO_200M_050219_1,8148,TNEYVCTNY False False YYPDGNSQY 43.06525 553.724841296673 235000080.0 8140.0 nc|ENSG00000141380|Q15532-2|SS18 4.3978324731191 2.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8149 43.069 183.0 597570.0 25 0 65252.0 + 29792 QPYYRSATV 9 107 542.7748244306019 1083.5350959280038 2 542.7750121951103 MULTI CID FTMS 0 0 0 8140 494040.53125 0.7226732566183769 -1 0.1086845397949218 9 Unmodified _QPYYRSATV_ REV__ENSG00000141098|ENST00000268797|GFOD2;REV__ENST00000602522.1_1_16:67709060-67709966:-|nuORF;REV__nc|ENSG00000141098|Q3B7J2-2|GFOD2 11.494710602746466 0.5255349189887087 3 [QP]YYS 5 -1 28.015 0.0 0.0 2.5856 0.0 0.0 0.0 442.2425617679225 442.2425617679225 9.431890546242345 0.0 0.0 0.0 0 0.1989700043360188 0.0 0.3807196863200844 0.0 [QP]YYS 2.5856 - 264 + 1 1.607 87504.7 1.0 2964 5183 8140 HBL1_DMSO_200M_050219_1,8149 HBL1_DMSO_200M_050219_1,8149,QPYYRSATV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8150 43.071 119.0 576440.0 25 0 53105.0 885 AEVLPEAESV 10 110 522.2673411339869 1042.5201293347736 2 522.2684814333916 MULTI CID FTMS 0 0 0 8140 421632.09375 0.8966343880616455 -1 0.1086845397949218 10 Unmodified _AEVLPEAESV_ ENSG00000050555|ENST00000361069|LAMC3 19.256988751693697 0.5244284437930726 3 [{I|L}T]TPP 5 9 22.892 0.0 0.0 2.1958 0.0 0.0 0.0 530.2115410381517 530.2115410381517 9.397285225147272 0.0 0.0 0.0 0 0.6861818737241735 1.3010299956639813 0.3054621874040891 0.0 [{I|L}T]TPP 2.1958 - 182 1 1.607 58285.6 1.0 2965 5183 8140 HBL1_DMSO_200M_050219_1,8150 HBL1_DMSO_200M_050219_1,8150,AEVLPEAESV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8151 43.074 118.0 437020.0 25 0 21896.0 + 30289 QYQANANQL 9 94 525.2539877039354 1048.4934224746708 2 525.2526122927666 MULTI CID FTMS 0 0 0 8140 452844.65625 0.5185757906788809 -1 0.1086845397949218 11 Unmodified _QYQANANQL_ ENSG00000089177|ENST00000354981|KIF16B;nc|ENSG00000089177|Q96L93-2|KIF16B;nc|ENSG00000089177|Q96L93-4|KIF16B;nc|ENSG00000089177|Q96L93-5|KIF16B;nc|ENSG00000089177|Q96L93-6|KIF16B 57.47134341890925 0.0274820932774257 3 [YQ]QAN{[QG]|[NA]}{I|L}Q 9 2 + 26.862 0.0 0.0 2.5619 2.5619 78.613 0.0 0.0 0.0 0.8689287626018469 9.861816429038983 0.8689287626018469 9.208187539523756 0 0.4929928190999391 0.958607314841775 0.0 1.1307196863200843 [YQ]QAN{[QG]|[NA]}{I|L}Q;[YQ][AG]AN{[QG]|[NA]}{I|L}Q;[YQ]QAGG{[QG]|[NA]}{I|L}Q;[{M(Oxidation (M))|F}V]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N{[QG]|[NA]}{I|L}Q;[Q{I|L}]C(Carbamidomethyl (C))P[YQ]{I|L}Q;[Q{I|L}]C(Carbamidomethyl (C))PS{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q;{[QG]|[NA]}Q[YQ]{[QG]|[NA]}{I|L}Q;{[QN]|[E{I|L}]|[KN]}A[YQ]{[QG]|[NA]}{I|L}Q;[{M(Oxidation (M))|F}V]{[YD]|[{M(Oxidation (M))|F}M]}[HK]{I|L}Q;{[QG]|[NA]}GA[YQ]{[QG]|[NA]}{I|L}Q 2.5619;1.6837;1.6837;0.69214;0.50683;0.45805;0.23966;0.14232;0.12798;0.0013379 -;-;-;-;-;-;-;-;-;- 614 1 1.607 47372.5 1.0 2966 5183 8140 HBL1_DMSO_200M_050219_1,8151 HBL1_DMSO_200M_050219_1,8151,QYQANANQL True True QYQANANQL 43.073752 525.252612292767 4087806.0 8140.0 ENSG00000089177|ENST00000354981|KIF16B;;nc|ENSG00000089177|Q96L93-4|KIF16B;;nc|ENSG00000089177|Q96L93-6|KIF16B;;nc|ENSG00000089177|Q96L93-2|KIF16B;;nc|ENSG00000089177|Q96L93-5|KIF16B 7.581775824228923 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8152 43.077 188.0 433270.0 25 0 89357.0 + 32408 RYYDDPREY 9 67 638.7827591150896 1275.550965296979 2 638.7836791872978 MULTI CID FTMS 0 0 0 8140 422365.375 0.7056341229800659 2 -0.190155029296875 12 Unmodified _RYYDDPREY_ ENSG00000065526|ENST00000375759|SPEN 19.256988751693697 0.3154191944385105 3 [RP]E 3 6 14.265 0.0 0.0 1.1183 0.0 0.0 0.0 890.331701951529 890.331701951529 2.2750717254474058 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 + [RP]E 1.1183 + + 65 1 1.607 66678.3 1.0 2967 5183 8140 HBL1_DMSO_200M_050219_1,8152 HBL1_DMSO_200M_050219_1,8152,RYYDDPREY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8153 43.089 680.0 218090.0 25 0 18099.0 26049 NMPKFDSLWDY 11 104 708.3198201309453 1414.6250873286906 2 708.3209716677666 MULTI CID FTMS 0 0 0 8140 250114.421875 0.9577893110667818 -1 0.1086845397949218 13 Unmodified _NMPKFDSLWDY_ ENSG00000197928|ENST00000598513|ZNF677 26.268140514670165 0.4754186812857754 3 [MN]PN{I|L}NEEQK 10 8 97.049 0.0 0.0 6.8604 0.0 0.0 0.0 214.0541018121704 214.0541018121704 57.66014501085854 0.0 0.0 0.0 0 1.1861818737241734 1.6989700043360187 0.2887254899964357 1.6549471895720984 [MN]PN{I|L}NEEQK 6.8604 - 1834 + 1 1.607 108571.8 1.0 2968 5183 8140 HBL1_DMSO_200M_050219_1,8153 HBL1_DMSO_200M_050219_1,8153,NMPKFDSLWDY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8154 43.101 683.0 434600.0 25 0 60890.0 + 21113 LPANSVTKV 9 193 464.7769158573384 927.5392787814768 2 464.7773620486259 MULTI CID FTMS 0 0 0 8140 236767.171875 0.6165925672617812 -1 0.1086845397949218 14 Unmodified _LPANSVTKV_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 90.13494162714682 0.0149365284241176 3 {I|L}PANSVTKV 9 0 + 83.494 0.0 0.0 9.0017 9.0017 91.579 0.0 0.0 0.0 33.467874862246546 6.502574502021787 6.502574502021787 6.502574502021787 0 1.5495462078546407 1.6989700043360187 0.5010912013506126 0.9957416651753048 + + {I|L}PANSVTKV;{I|L}PANSVTVK;{I|L}PAGGSVTKV;{I|L}PAGGSVTVK;{I|L}PANSV[KS]{I|L};{I|L}P[RP]{I|L}W{M(Oxidation (M))|F};{I|L}P[R{M(Oxidation (M))|F}]WP{I|L};{I|L}V[NS][PA]TKV;{I|L}[KG]D[PA]TKV;{I|L}V[NS][PA]TVK 9.0017;8.3007;8.009;7.3079;6.6019;4.567;3.5132;3.4306;2.7948;2.7295 +;-;-;-;-;-;-;-;-;- + 1351 + 1 1.607 225325.9 1.0 2969 5183 8140 HBL1_DMSO_200M_050219_1,8154 HBL1_DMSO_200M_050219_1,8154,LPANSVTKV True True LPANSVTKV 43.1011 464.777362048626 1815704.375 8140.0 nc|ENSG00000124155|Q969N2-2|PIGT;;nc|ENSG00000124155|Q969N2-6|PIGT;;nc|ENSG00000124155|Q969N2-3|PIGT;;nc|ENSG00000124155|Q969N2-4|PIGT;;ENSG00000124155|ENST00000279036|PIGT;;nc|ENSG00000124155|Q969N2-5|PIGT 6.347834904988607 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8155 43.115 800.0 422060.0 25 0 43901.0 + 45089 YPYPSKKL 8 288 332.5235008333824 994.5486731003472 3 332.5233642458916 MULTI CID FTMS 0 0 0 8140 212547.359375 0.7099562221626085 -1 0.1086845397949218 15 Unmodified _YPYPSKKL_ ENSG00000139921|ENST00000457354|TMX1;ENST00000556683.1_1_14:51712110-51721234:+|nuORF 43.85829265575387 0.1697421968005898 3 YPYPSKK{I|L} 8 0 + 72.443 0.0 0.0 7.284 7.284 88.78 0.0 0.0 0.0 62.76562229541095 4.848582899777199 4.848582899777199 6.571717782574964 0 0.3494850021680094 2.0 0.7302046884880937 0.3855295258165019 + + YPYPSKK{I|L};YPYPSK{I|L}K;YP{I|L}{M(Oxidation (M))|F}SKK{I|L};YP{I|L}{M(Oxidation (M))|F}SK{I|L}K;YPY{I|L}{I|L}{I|L}DV;YPY{I|L}[QA]K{I|L};YP{I|L}Y{I|L}{I|L}DV;Y{I|L}{M(Oxidation (M))|F}PSKK{I|L};YPY{I|L}[QA]{I|L}K;YP{I|L}Y[QA]K{I|L} 7.284;6.6233;6.4383;5.7776;5.3326;5.2699;4.7772;4.619;4.6091;4.4998 +;-;-;-;-;-;-;-;-;- + 393 + 1 1.607 266115.1 0.8999999761581421 2970 5183 8140 HBL1_DMSO_200M_050219_1,8155 HBL1_DMSO_200M_050219_1,8155,YPYPSKKL False True YPYPSKKL 43.114925 332.523364245892 3406388.25 8140.0 ENST00000556683.1_1_14:51712110-51721234:+|nuORF;;ENSG00000139921|ENST00000457354|TMX1 3.809376080830892 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8156 43.128 755.0 270570.0 25 0 14219.0 + 2672 ATDPTIHTV 9 179 477.7481638411996 953.4817747491992 2 477.7484619021416 MULTI CID FTMS 0 0 0 8140 178904.265625 0.0110155616574127 6 -0.4590873718261719 16 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 64.23631603340823 0.0237365939569086 3 [TA]DP[{I|L}T]HTV 9 0 + 59.137 0.0 0.0 6.2022 6.2022 89.134 0.0 0.0 0.0 20.723659190374832 9.373419720124543 9.373419720124543 9.373419720124543 0 0.5994850021680094 2.0 1.3076556684809653 0.0 + + [TA]DP[{I|L}T]HTV;[TA]DP[{I|L}T]H{I|L}S;[TA]DP[{I|L}T]HS{I|L};[TA]AQVVPDGP;[TA]A[AG]VVPDGP;[TA]DPVVQQP;[TA]{[ET]|[MV]}[VP]HTV;[TA]DPVVQAGP;[TA]DPVVQGAP;{[QV]|[N{I|L}]|[RA]|[KV]}Q[{I|L}T]PDGP 6.2022;5.2192;5.2014;4.0288;3.0676;3.0508;2.9441;2.738;2.7351;2.7048 +;-;-;-;-;-;-;-;-;- + 977 + 1 1.607 155313.7 1.0 2971 5183 8140 HBL1_DMSO_200M_050219_1,8156 HBL1_DMSO_200M_050219_1,8156,ATDPTIHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8157 43.143 800.0 233890.0 25 0 13677.0 -1 MPPPPPQGV 9 187 468.2373605028965 0 468.2375366091728 PEAK CID FTMS 0 0 0 8140 158356.984375 0.6058073262130123 29 -2.2319793701171875 17 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 20.871210003555333 0.1931737080476581 3 PP 2 -1 5.9691 0.0 0.0 0.63878 0.0 0.0 302.164954304818 435.1714188006456 737.3363731054635 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.63878 + + 49 + 1 1.607 145401.5 0.8799999952316284 2972 5183 8140 HBL1_DMSO_200M_050219_1,8157 HBL1_DMSO_200M_050219_1,8157,MPPPPPQGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8159 43.147 3.0 15239000.0 25 0 1312100.0 + 21442 LPHHRVIEV 9 82 367.2174237042729 1098.6304417130186 3 367.2175781130791 MULTI CID FTMS 0 0 0 8158 16783034.0 0.5975378627392479 1 -0.0931167602539062 1 Unmodified _LPHHRVIEV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 22.736283301280096 0.2418982879461534 3 [{I|L}P]HHH 5 5 24.894 0.0 0.0 2.2659 0.0 0.0 0.0 474.2967928522094 474.2967928522094 4.008556860707135 0.0 0.0 0.0 0 0.3054621874040891 1.154901959985743 0.0 0.0 [{I|L}P]HHH 2.2659 - 54 + 1 1.607 45531.4 1.0 2973 5184 8158 HBL1_DMSO_200M_050219_1,8159 HBL1_DMSO_200M_050219_1,8159,LPHHRVIEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8160 43.149 17.0 2668500.0 25 0 300970.0 + 21444 LPHHRVIEV 9 68 550.3220172160127 1098.6294814988253 2 550.3226196169853 MULTI CID FTMS 0 0 0 8158 3033235.0 0.640145155861053 1 -0.0931167602539062 2 Unmodified _LPHHRVIEV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 21.53697664764585 0.2571576504437394 3 {I|L}PHH 4 5 58.245 0.0 0.0 5.3016 0.0 0.0 0.0 611.3545653335668 611.3545653335668 51.25569708000178 0.0 0.0 0.0 0 0.6307196863200843 2.0 0.0 0.0 + {I|L}PHH 5.3016 + + 67 + 1 1.607 43202.0 1.0 2974 5184 8158 HBL1_DMSO_200M_050219_1,8160 HBL1_DMSO_200M_050219_1,8160,LPHHRVIEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8161 43.15 46.0 1125600.0 25 0 117560.0 + -1 NPKFNDPHV 9 86 534.2287425355445 1066.4429321378889 2 534.2290527224541 MULTI CID FTMS 0 0 0 8158 1009278.4375 0.5112197026651689 -2 0.2057228088378906 3 Carbamidomethyl (C) _QSVVENC(Carbamidomethyl (C))TM_ ENST00000480835.1_1_2:96943505-96944085:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;ENSG00000144028|ENST00000323853|SNRNP200 21.53697664764585 0.2571576504437394 3 {[QS]|[NT]}VV{[MG]|[TS]}N 7 -1 31.769 0.0 0.0 2.979 0.0 0.0 0.0 348.0902910861765 348.0902910861765 15.11394143053813 0.0 0.0 0.0 0 0.4247425010840047 0.8239087409443188 0.3252574989159953 0.3054621874040891 {[QS]|[NT]}VV{[MG]|[TS]}N 2.979 - 170 1 1.607 46331.4 1.0 2975 5184 8158 HBL1_DMSO_200M_050219_1,8161 HBL1_DMSO_200M_050219_1,8161,QSVVENCTM False False NPKFNDPHV 43.14985 534.229052722454 3145377.0 8158.0 ENST00000480835.1_1_2:96943505-96944085:-|nuORF;;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 1.8723008235295613 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8162 43.152 119.0 842480.0 25 0 80917.0 + 3707 DAFNQEKV 8 123 475.7321578756771 949.4497628181542 2 475.7322875857353 MULTI CID FTMS 0 0 0 8158 971376.8125 1.0 0 0.0 4 Unmodified _DAFNQEKV_ ENSG00000147439|ENST00000276416|BIN3;nc|ENSG00000147439|Q9NQY0-2|BIN3 78.14939416004806 0.0999748067387998 3 {[DA]|[EG]}{M(Oxidation (M))|F}NQEKV 8 0 + 76.621 0.0 0.0 8.0701 8.0701 87.181 0.0 0.0 0.0 19.46395015176065 3.521825181113627 3.521825181113627 3.521825181113627 0 0.6643943297944485 1.6989700043360187 1.0356668758921828 1.1307196863200843 + + {[DA]|[EG]}{M(Oxidation (M))|F}NQEKV;{[DA]|[EG]}{M(Oxidation (M))|F}NQEVK;{[DA]|[EG]}{M(Oxidation (M))|F}N[AG]EKV;{[DA]|[EG]}{M(Oxidation (M))|F}GGQEKV;{[DA]|[EG]}{M(Oxidation (M))|F}N[AG]EVK;{[DA]|[EG]}{M(Oxidation (M))|F}GGQEVK;{[DA]|[EG]}{M(Oxidation (M))|F}GG[AG]EKV;{[DA]|[EG]}{M(Oxidation (M))|F}GG[AG]EVK;{[DA]|[EG]}{M(Oxidation (M))|F}NQ{[TV]|[{I|L}S]}GV;{[DA]|[EG]}[C(Carbamidomethyl (C))K]TEKV 8.0701;7.6991;7.0945;7.0945;6.7236;6.7236;6.1247;5.7538;5.6408;4.9091 +;-;-;-;-;-;-;-;-;- + 806 + 1 1.607 81679.7 1.0 2976 5184 8158 HBL1_DMSO_200M_050219_1,8162 HBL1_DMSO_200M_050219_1,8162,DAFNQEKV True True DAFNQEKV 43.152312 475.732287585735 4139846.75 8158.0 ENSG00000147439|ENST00000276416|BIN3;;nc|ENSG00000147439|Q9NQY0-2|BIN3 6.773903846740723 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8163 43.154 76.0 818050.0 25 0 123410.0 + 38164 TPPTAQVV 8 80 406.729270483487 811.4439880337741 2 406.7292663455009 MULTI CID FTMS 0 0 0 8158 837359.0625 0.2510631879492773 4 -0.2649154663085937 5 Unmodified _TPPTAQVV_ ENSG00000116489|ENST00000263168|CAPZA1;ENST00000466066.1_1_1:113202257-113212751:+|nuORF 38.15118350030904 0.2652218139009398 3 [TP]PATQVV 8 2 + 42.819 0.0 0.0 5.2769 5.2769 80.198 0.0 0.0 0.0 14.137342758552697 28.21485507973945 14.137342758552697 4.3753063169585005 0 0.6989700043360187 1.0457574905606752 0.899649864804614 0.0 [TP]PATQVV;[TP]PAQTVV;[TP]PAT[AG]VV;[TP]PA[AG]TVV;[TP][QA]PTVV;[AG]A[TP]PTVV;[QA][TP]PTVV 5.2769;4.7377;4.1354;3.5962;2.9519;1.3243;1.029 -;-;-;-;-;-;- 138 1 1.607 53305.2 1.0 2977 5184 8158 HBL1_DMSO_200M_050219_1,8163 HBL1_DMSO_200M_050219_1,8163,TPPTAQVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8164 43.157 129.0 950350.0 25 0 366690.0 + -1 APNYCDST 8 83 464.1776108042707 926.3406686753416 2 464.1769286990166 MULTI CID FTMS 0 0 0 8158 753270.0 1.0 0 0.0 6 Carbamidomethyl (C) _APNYC(Carbamidomethyl (C))DST_ REV__ENSG00000139438|ENST00000538780|FAM222A 9.347437153973935 0.7675937258251505 3 Q 1 -1 14.124 0.0 0.0 1.5248 0.0 0.0 780.2711323978009 0.0 780.2711323978009 0.0 2.134679910804405 0.0 0.0 0 0.0 0.0 0.0 0.2134679910804404 Q 1.5248 - 76 + 1 1.607 99262.8 1.0 2978 5184 8158 HBL1_DMSO_200M_050219_1,8164 HBL1_DMSO_200M_050219_1,8164,APNYCDST False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8165 43.161 249.0 703430.0 25 0 79016.0 -1 0 160 336.11182279870843 670.2090926642169 2 336.1116515994072 MULTI CID FTMS 0 0 0 8158 591685.625 1.0 0 0.0 7 3 EC(Carbamidomethyl (C)) 2 -1 17.959 0.0 0.0 2.6796 0.0 0.0 363.124588092185 0.0 363.124588092185 0.0 1.327862308715595 0.0 0.0 0 0.0 0.0 0.0 0.0 EC(Carbamidomethyl (C)) 2.6796 - 90 + 1 1.607 143931.2 1.0 2979 5184 8158 HBL1_DMSO_200M_050219_1,8165 HBL1_DMSO_200M_050219_1,8165, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8166 43.169 408.0 492330.0 25 0 52770.0 + -1 FNSSMDCVL 9 169 544.7223313005735 1087.430109667947 2 544.7234985232353 MULTI CID FTMS 0 0 0 8158 500951.40625 0.2404126602501614 -3 0.2931976318359375 8 Carbamidomethyl (C),Oxidation (M) _FNSSM(Oxidation (M))DC(Carbamidomethyl (C))VL_ REV__ENSG00000135069|ENST00000376588|PSAT1;REV__nc|ENSG00000135069|Q9Y617-2|PSAT1 22.736283301280096 0.2418982879461534 3 [YV]Q 3 -1 31.427 0.0 0.0 2.89 0.0 0.0 0.0 694.2160037932 694.2160037932 8.418468498760703 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 [YV]Q 2.89 - 749 1 1.607 156829.6 1.0 2980 5184 8158 HBL1_DMSO_200M_050219_1,8166 HBL1_DMSO_200M_050219_1,8166,FNSSMDCVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8167 43.18 647.0 417260.0 25 0 20591.0 -1 0 94 1115.1629266664377 5570.7782509991885 5 1115.563403308392 MULTI CID FTMS 0 0 0 8158 394048.0625 0.6554706514088717 6 -0.4274711608886719 9 3 PQGPPP 6 -1 49.157 0.0 0.0 0.8824 0.0 0.0 1596.7540545857355 3397.698511950806 4994.452566536542 0.0 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 PQGPPP 0.8824 - 317 + 1 1.607 168024.9 1.0 2981 5184 8158 HBL1_DMSO_200M_050219_1,8167 HBL1_DMSO_200M_050219_1,8167, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8168 43.189 545.0 410350.0 25 0 36075.0 + 25383 NAYTSSQI 8 203 442.2114380390925 882.408323144985 2 442.2121459841728 MULTI CID FTMS 0 0 0 8158 356467.15625 0.2958471505748646 -2 0.2057228088378906 10 Unmodified _NAYTSSQI_ ENSG00000157456|ENST00000288207|CCNB2 54.773552608820026 0.1167943196628344 3 {[QG]|[NA]}YTSSQ{I|L} 8 0 + 38.162 0.0 0.0 4.3247 4.3247 83.709 0.0 0.0 0.0 12.079017741538909 3.4639489976592728 3.4639489976592728 12.079017741538909 0 0.6910617923687516 1.6989700043360187 0.5994850021680094 0.4163865622122673 + + {[QG]|[NA]}YTSSQ{I|L};[AG]GYTSSQ{I|L};{[QN]|[E{I|L}]|[KN]}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{I|L};GGAYTSSQ{I|L};[YT]{[QG]|[NA]}SSQ{I|L};{[QG]|[NA]}{[CP]|[EA]}[HT]Q{I|L};[{I|L}T]D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{I|L};[AG]G{[CP]|[EA]}[HT]Q{I|L};GGW[WH]Q{I|L} 4.3247;2.9559;2.1588;2.0651;1.5319;1.1924;0.31458;0.28443;0.16969;0.11547 +;-;-;-;-;-;-;-;-;- + 995 1 1.607 172576.5 1.0 2982 5184 8158 HBL1_DMSO_200M_050219_1,8168 HBL1_DMSO_200M_050219_1,8168,NAYTSSQI True True NAYTSSQI 43.189495 442.212145984173 5142421.5 8158.0 ENSG00000157456|ENST00000288207|CCNB2 4.737503528594971 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8169 43.199 546.0 541410.0 25 0 243040.0 + 27186 PGGGRGGN 8 118 671.3215349857343 670.3142585191342 1 671.3209106326103 MULTI CID FTMS 0 0 0 8158 336218.03125 0.7941463340461646 -2 0.2057228088378906 11 Unmodified _PGGGRGGN_ REV__ENSG00000275832|ENST00000622683|ARHGAP23;REV__nc|ENSG00000275832|Q9P227-2|ARHGAP23 0.7936320650641473 0.8195151834710337 3 DV{[HG]|PP}{M(Oxidation (M))|F}P 6 -1 + 25.406 0.0 0.0 3.7902 3.7902 68.793 0.0 0.0 0.0 0.1230450566754548 1.1394335230683694 0.1230450566754548 0.1230450566754548 0 0.0 0.0 0.0 0.0 DV{[HG]|PP}{M(Oxidation (M))|F}P;VD{[HG]|PP}{M(Oxidation (M))|F}P;DV{[HG]|PP}P{M(Oxidation (M))|F};VD{[HG]|PP}P{M(Oxidation (M))|F};D[RH]{M(Oxidation (M))|F}P;D[RH]P{M(Oxidation (M))|F};DV{[HG]|PP}M{I|L};VD{[HG]|PP}M{I|L};D[RH]M{I|L};H[RD]{M(Oxidation (M))|F}P 3.7902;3.7718;3.6202;3.6018;3.3146;3.1447;2.8604;2.842;2.3849;1.7047 -;-;-;-;-;-;-;-;-;- 138 + 1 1.607 209906.6 1.0 2983 5184 8158 HBL1_DMSO_200M_050219_1,8169 HBL1_DMSO_200M_050219_1,8169,PGGGRGGN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8170 43.209 571.0 172470.0 25 0 30756.0 -1 AMSCCVSVS 9 129 480.1856292328628 0 480.1856262087822 PEAK CID FTMS 0 0 0 8158 284693.03125 1.0 0 0.0 12 Carbamidomethyl (C),Oxidation (M) _AM(Oxidation (M))SCC(Carbamidomethyl (C))VSVS_ nc|ENSG00000186111|O60331-2|PIP5K1C 11.640296217721598 0.2934555500198502 3 TD 2 -1 15.886 0.0 0.0 1.6576 0.0 0.0 671.2087390792038 68.05140863590077 739.2601477151046 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.2614393726401688 0.0 TD 1.6576 - 56 + 1 1.607 79485.8 1.0 2984 5184 8158 HBL1_DMSO_200M_050219_1,8170 HBL1_DMSO_200M_050219_1,8170,AMSCCVSVS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8171 43.223 800.0 235100.0 25 0 42061.0 + 43780 YELYHDLK 8 187 360.850482820424 1079.529619061472 3 360.8502075076103 MULTI CID FTMS 0 0 0 8158 72612.578125 1.0 0 0.0 13 Unmodified _YELYHDLK_ REV__ENSG00000140015|ENST00000322893|KCNH5;REV__ENST00000394964.3_1_14:63416779-63568536:-|nuORF;REV__nc|ENSG00000140015|Q8NCM2-2|KCNH5;REV__nc|ENSG00000140015|Q8NCM2-3|KCNH5 10.823927491677226 0.7510103885582552 3 YYEV 4 -1 32.735 0.0 0.0 3.0323 0.0 0.0 0.0 522.2685030572874 522.2685030572874 21.7659970366416 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 YYEV 3.0323 - 255 + 1 1.607 150000.9 0.8999999761581421 2985 5184 8158 HBL1_DMSO_200M_050219_1,8171 HBL1_DMSO_200M_050219_1,8171,YELYHDLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8172 43.236 694.0 188200.0 25 0 17165.0 + -1 MNQSYCTFM 9 142 599.221936819228 1196.4293207052558 2 599.2228271365166 MULTI CID FTMS 0 0 0 8158 156780.875 0.4908053266935049 -3 0.2931976318359375 14 Carbamidomethyl (C),Oxidation (M) _MNQSYC(Carbamidomethyl (C))TFM(Oxidation (M))_ REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF 8.745405648335112 0.6093864874670651 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q 3 -1 24.437 0.0 0.0 2.0425 0.0 0.0 0.0 831.2463732777745 831.2463732777745 3.99166239860314 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q 2.0425 - 300 1 1.607 97075.9 1.0 2986 5184 8158 HBL1_DMSO_200M_050219_1,8172 HBL1_DMSO_200M_050219_1,8172,MNQSYCTFM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8174 43.241 32.0 979160.0 25 0 116720.0 + 32280 RWPKKSAEF 9 73 383.5450870782333 1147.6134318349 3 383.5450927615166 MULTI CID FTMS 0 0 0 8173 1552192.25 0.3976960187795857 4 -0.2689323425292969 1 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 10.823927491677226 0.5436922275383211 3 {M(Oxidation (M))|F} 1 8 20.485 0.0 0.0 1.785 0.0 0.0 982.5343282966172 0.0 982.5343282966172 0.0 18.494850021680094 0.0 0.0 0 0.5 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.785 + + 9 + 1 1.583 32192.7 1.0 2987 5185 8173 HBL1_DMSO_200M_050219_1,8174 HBL1_DMSO_200M_050219_1,8174,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8175 43.242 50.0 404920.0 25 0 40939.0 3981 DALRKIRAV 9 46 347.88928995644744 1040.6460404695424 3 347.8890869021416 MULTI CID FTMS 0 0 0 8173 225730.984375 0.0781122559456825 2 -0.0935630798339843 2 Unmodified _DALRKIRAV_ ENSG00000155827|ENST00000389120|RNF20 4.5288652416199255 0.7565837746943351 3 DA 2 7 36.198 0.0 0.0 3.4784 0.0 0.0 0.0 851.5576678205048 851.5576678205048 34.7370154245451 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + DA 3.4784 + + 6 + 1 1.583 27159.3 1.0 2988 5185 8173 HBL1_DMSO_200M_050219_1,8175 HBL1_DMSO_200M_050219_1,8175,DALRKIRAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8176 43.243 5.7 855810.0 25 0 87201.0 -1 0 16 753.8760323763025 3011.47502363881 4 754.3783447146416 MULTI CID FTMS 0 0 0 8173 5409976.5 1.0 0 0.0 3 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 16085.5 1.0 2989 5185 8173 HBL1_DMSO_200M_050219_1,8176 HBL1_DMSO_200M_050219_1,8176, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8177 43.244 23.0 737230.0 25 0 66142.0 -1 0 49 517.3672089411534 0 517.7869750857353 PEAK CID FTMS 0 0 0 8173 87797.015625 1.0 0 0.0 4 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 22805.1 1.0 2990 5185 8173 HBL1_DMSO_200M_050219_1,8177 HBL1_DMSO_200M_050219_1,8177, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8178 43.245 12.0 245760.0 25 0 58414.0 -1 0 7 786.1642973705411 0 786.1517822146416 PEAK CID FTMS 0 0 0 -1 0 5 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 14204.3 1.0 2991 5185 8173 HBL1_DMSO_200M_050219_1,8178 HBL1_DMSO_200M_050219_1,8178, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8179 43.247 8.2 573270.0 25 0 67283.0 + 31465 RPRRRIPKK 9 16 603.9040435835342 0 603.7038452029228 PEAK CID FTMS 0 0 0 8173 1530453.75 1.0 0 0.0 6 Unmodified _RPRRRIPKK_ REV__ENSG00000164484|ENST00000296978|TMEM200A 0.0 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 13164.7 1.0 2992 5185 8173 HBL1_DMSO_200M_050219_1,8179 HBL1_DMSO_200M_050219_1,8179,RPRRRIPKK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8180 43.248 17.0 215610.0 25 0 21468.0 -1 0 14 1005.168322741985 0 1005.168322741985 PEAK CID FTMS 0 0 0 -1 0 7 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 13176.8 1.0 2993 5185 8173 HBL1_DMSO_200M_050219_1,8180 HBL1_DMSO_200M_050219_1,8180, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8181 43.249 22.0 105210.0 25 0 15588.0 -1 0 9 629.1224284072355 0 629.1224853396416 PEAK CID FTMS 0 0 0 8173 2500186.25 1.0 0 0.0 8 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 14602.9 1.0 2994 5185 8173 HBL1_DMSO_200M_050219_1,8181 HBL1_DMSO_200M_050219_1,8181, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8182 43.25 33.0 896680.0 25 0 127930.0 + 5055 DGYEQAARV 9 61 504.741228719566 1007.467904505932 2 504.7412902712822 MULTI CID FTMS 0 0 0 8173 2108283.25 1.0 0 0.0 9 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 18.1463463914782 0.3454829746528889 3 EQAA[RV] 6 3 30.45 0.0 0.0 3.0225 0.0 0.0 335.11326131535867 0.0 335.11326131535867 0.0 24.96584697476848 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 + EQAA[RV] 3.0225 + + 38 + 1 1.583 27560.4 1.0 2995 5185 8173 HBL1_DMSO_200M_050219_1,8182 HBL1_DMSO_200M_050219_1,8182,DGYEQAARV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8183 43.252 55.0 450510.0 25 0 22894.0 + -1 VLPCLALPD 9 56 499.2719174250669 0 499.2930175662041 PEAK CID FTMS 0 0 0 8173 168018.125 0.319482237907541 1 -0.0310173034667968 10 Carbamidomethyl (C) _VLPC(Carbamidomethyl (C))LALPD_ REV__ENSG00000047634|ENST00000380041|SCML1;REV__nc|ENSG00000047634|Q9UN30-1|SCML1;REV__nc|ENSG00000047634|Q9UN30-2|SCML1 8.593279151180031 0.3284076903191179 3 A 1 -1 10.485 0.0 0.0 1.0521 0.0 0.0 343.1782242030667 579.2888277643186 922.4670519673851 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 A 1.0521 + + 13 + 1 1.583 25042.1 1.0 2996 5185 8173 HBL1_DMSO_200M_050219_1,8183 HBL1_DMSO_200M_050219_1,8183,VLPCLALPD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8184 43.253 12.0 833900.0 25 0 77668.0 30039 QTRHRIEQK 9 33 598.3346435427666 0 598.3346435427666 PEAK CID FTMS 0 0 0 -1 0 11 Unmodified _QTRHRIEQK_ ENST00000522063.1_1_8:27957393-27970048:+|nuORF 1.4819007175156935 0.3444685223463734 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 18980.7 1.0 2997 5185 8173 HBL1_DMSO_200M_050219_1,8184 HBL1_DMSO_200M_050219_1,8184,QTRHRIEQK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8185 43.254 18.0 553100.0 25 0 104970.0 + 27134 PFNWLFRWERQ 11 18 789.9021272032962 1577.7897014733924 2 789.9031249880791 MULTI CID FTMS 0 0 0 8173 1164862.375 1.0 0 0.0 12 Unmodified _PFNWLFRWERQ_ REV__ENSG00000215262|ENST00000399881|KCNU1 0.3070304955306653 0.8736993455979228 3 {I|L}{I|L}S{I|L}D 5 -1 30.701 0.0 0.0 1.9458 0.0 0.0 547.2266514589465 486.2302034967407 1033.4568549556873 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}{I|L}S{I|L}D 1.9458 - 33 + 1 1.583 15885.9 1.0 2998 5185 8173 HBL1_DMSO_200M_050219_1,8185 HBL1_DMSO_200M_050219_1,8185,PFNWLFRWERQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8186 43.255 29.0 136290.0 25 0 16822.0 -1 0 13 758.1255981326103 0 758.1255981326103 PEAK CID FTMS 0 0 0 -1 0 13 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 16420.6 1.0 2999 5185 8173 HBL1_DMSO_200M_050219_1,8186 HBL1_DMSO_200M_050219_1,8186, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8187 43.256 29.0 164580.0 25 0 22087.0 -1 0 13 1037.9739990631278 2073.933445193056 2 1038.478442370892 MULTI CID FTMS 0 0 0 8173 995013.125 1.0 0 0.0 14 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 14685.1 1.0 3000 5185 8173 HBL1_DMSO_200M_050219_1,8187 HBL1_DMSO_200M_050219_1,8187, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8188 43.258 18.0 444010.0 25 0 96513.0 -1 0 19 593.1556789561836 592.1484024895835 1 593.0030395388603 MULTI CID FTMS 0 0 0 -1 0 15 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 14953.0 1.0 3001 5185 8173 HBL1_DMSO_200M_050219_1,8188 HBL1_DMSO_200M_050219_1,8188, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8189 43.259 18.0 242160.0 25 0 22037.0 + 9432 FLAFIIWYMMW 11 16 760.8778564333916 0 760.8778564333916 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _FLAFIIWYMMW_ REV__ENSG00000068615|ENST00000538924|REEP1;REV__nc|ENSG00000068615|Q9H902-2|REEP1;REV__nc|ENSG00000068615|Q9H902-3|REEP1;REV__nc|ENSG00000068615|Q9H902-4|REEP1;REV__nc|ENSG00000068615|Q9H902|REEP1 0.3506318815782774 0.47618401536486 3 T 1 -1 6.9897 0.0 0.0 0.45993 0.0 0.0 997.4973988025268 418.17743860416255 1415.6748374066894 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.45993 - 1 + 1 1.583 11674.6 1.0 3002 5185 8173 HBL1_DMSO_200M_050219_1,8189 HBL1_DMSO_200M_050219_1,8189,FLAFIIWYMMW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8190 43.26 38.0 94028.0 25 0 13156.0 + -1 MTCHMFGDECY 11 12 733.7458984255791 0 733.7458984255791 PEAK CID FTMS 0 0 0 -1 0 17 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))TC(Carbamidomethyl (C))HMFGDEC(Carbamidomethyl (C))Y_ REV__ENSG00000110799|ENST00000261405|VWF 0.0 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 12780.5 1.0 3003 5185 8173 HBL1_DMSO_200M_050219_1,8190 HBL1_DMSO_200M_050219_1,8190,MTCHMFGDECY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8191 43.261 38.0 245710.0 25 0 26115.0 + 18476 KYKFFAFWKY 10 30 714.3798705935478 0 714.3798705935478 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _KYKFFAFWKY_ REV__CTSC-RAB38|1|fusion;REV__CTSC-RAB38|2|fusion;REV__ENSG00000109861|ENST00000227266|CTSC 0.4007161486938917 0.3961065659209837 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 16868.5 1.0 3004 5185 8173 HBL1_DMSO_200M_050219_1,8191 HBL1_DMSO_200M_050219_1,8191,KYKFFAFWKY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8192 43.262 21.0 390500.0 25 0 90463.0 -1 0 21 848.9583618044853 0 848.9583618044853 PEAK CID FTMS 0 0 0 -1 0 19 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 13730.8 1.0 3005 5185 8173 HBL1_DMSO_200M_050219_1,8192 HBL1_DMSO_200M_050219_1,8192, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8193 43.267 279.0 33334.0 25 0 4828.2 -1 0 24 1048.200854480267 0 1048.200854480267 PEAK CID FTMS 0 0 0 -1 0 20 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 15341.7 1.0 3006 5185 8173 HBL1_DMSO_200M_050219_1,8193 HBL1_DMSO_200M_050219_1,8193, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8195 43.276 362.0 102440.0 25 0 32350.0 -1 0 43 606.5025512576103 0 606.5025512576103 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.583 37819.2 1.0 3007 5186 8194 HBL1_DMSO_200M_050219_1,8195 HBL1_DMSO_200M_050219_1,8195, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8196 43.277 51.0 2436600.0 25 0 413190.0 + 16393 IYQSKVREL 9 88 379.2203914311493 1134.639344893648 3 379.2205993533134 MULTI CID FTMS 0 0 0 8194 1227067.625 0.0350965300168339 -3 0.2211723327636718 2 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 40.23920728925047 0.0741434193262949 3 {I|L}YQSKV 6 3 70.979 0.0 0.0 6.2557 0.0 0.0 0.0 413.21622869097433 413.21622869097433 56.28653141768609 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.7614393726401688 0.8494850021680094 + {I|L}YQSKV 6.2557 + + 123 + 1 1.583 103324.4 1.0 3008 5186 8194 HBL1_DMSO_200M_050219_1,8196 HBL1_DMSO_200M_050219_1,8196,IYQSKVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8197 43.278 46.0 1155900.0 25 0 72047.0 + + 16389 IYQSKVREL 9 68 568.3269002633236 1134.6392475934472 2 568.3276244997978 MULTI CID FTMS 0 0 0 8194 983198.4375 0.0401166206336689 -3 0.2211723327636718 3 Unmodified _IYQSKKQIQ_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 41.8396318013385 0.0653578398400075 3 {I|L}YQSKV 6 -1 81.815 0.0 0.0 7.2107 0.0 0.0 0.0 413.2165621393188 413.2165621393188 74.82570335676726 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.805462187404089 0.4247425010840047 {I|L}YQSKV 7.2107 - 64 + 1 1.583 49256.7 1.0 3009 5186 8194 HBL1_DMSO_200M_050219_1,8197 HBL1_DMSO_200M_050219_1,8197,IYQSKKQIQ False False IYQSKVREL 43.278411 568.327624499798 1150901952.0 8194.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 5.507297992706299 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8198 43.28 71.0 1098600.0 25 0 77325.0 + 42732 VVDPNDPQM 9 101 507.7314825300917 1013.4484121269834 2 507.7320434451103 MULTI CID FTMS 0 0 0 8194 717919.8125 0.0423941387808445 -4 0.3298568725585937 4 Unmodified _VVDPNDPQM_ ENSG00000151883|ENST00000281631|PARP8 39.94969957227396 0.0757326808254658 3 VVD[NP]D 6 3 40.128 0.0 0.0 3.9596 0.0 0.0 0.0 371.1383871458089 371.1383871458089 0.5576814511924653 0.0 0.0 0.0 0 1.110924374808178 2.0 0.0 0.7134679910804405 + VVD[NP]D 3.9596 + + 487 1 1.583 63727.2 1.0 3010 5186 8194 HBL1_DMSO_200M_050219_1,8198 HBL1_DMSO_200M_050219_1,8198,VVDPNDPQM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8199 43.282 80.0 597030.0 25 0 29742.0 + 26603 NVPWTRTI 8 93 493.77244556917225 985.5303382051444 2 493.7725097537041 MULTI CID FTMS 0 0 0 8194 695561.75 0.016073104898444 6 -0.4157142639160156 5 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 21.74664581756881 0.5868176546531598 3 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L} 9 -1 + 28.35 0.0 0.0 2.8766 2.8766 76.927 0.0 0.0 0.0 4.137342758552695 9.3538678994733 4.137342758552695 7.7815125038364386 0 1.1237125054200234 0.0 0.0 0.0 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L};{[NV]|[RG]}R[NG]VNT{I|L};AAAR{[NV]|[RG]}GNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GGGT{I|L};AAAR[NG]VNT{I|L};{[NV]|[RG]}R[NG]VGGT{I|L};AAAR{[NV]|[RG]}GGGT{I|L};AAAR[NG]VGGT{I|L};{[NV]|[RG]}R[KG][NG]E{I|L};{[NV]|[RG]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}N[VP] 2.8766;2.0871;2.0556;1.9423;1.266;1.1527;1.1257;0.33609;0.058944;0.0097777 -;-;-;-;-;-;-;-;-;- 259 1 1.583 44806.5 1.0 3011 5186 8194 HBL1_DMSO_200M_050219_1,8199 HBL1_DMSO_200M_050219_1,8199,NVPWTRTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8200 43.288 363.0 408740.0 25 0 34482.0 -1 LQDAGYYQC 9 153 559.23394473663 1116.4533365400598 2 559.2343017458916 MULTI CID FTMS 0 0 0 8194 480295.09375 1.0 0 0.0 6 Carbamidomethyl (C) _LQDAGYYQC(Carbamidomethyl (C))_ ENSG00000103742|ENST00000352385|IGDCC4;ENST00000559327.1_1_15:65676349-65688574:-|nuORF;nc|ENSG00000103742|Q8TDY8-2|IGDCC4 20.41453444215458 0.284085796332423 3 [Y{I|L}]QENY[C(Carbamidomethyl (C))Q] 8 -1 + 51.066 0.0 0.0 4.574 4.574 79.559 0.0 0.0 0.0 7.257724967479859 4.6040937697618745 4.6040937697618745 6.020599913279625 0 0.3252574989159953 1.6989700043360187 0.3054621874040891 0.7134679910804405 [Y{I|L}]QENY[C(Carbamidomethyl (C))Q];[Y{I|L}]QDQY[C(Carbamidomethyl (C))Q];[YQ]{I|L}ENY[C(Carbamidomethyl (C))Q];[Y{I|L}][AG]ENY[C(Carbamidomethyl (C))Q];[Y{I|L}]QEGGY[C(Carbamidomethyl (C))Q];[YQ]{I|L}DQY[C(Carbamidomethyl (C))Q];[Y{I|L}][AG]DQY[C(Carbamidomethyl (C))Q];[Y{I|L}]QD[AG]Y[C(Carbamidomethyl (C))Q];[YQ]{I|L}EGGY[C(Carbamidomethyl (C))Q];[Q{I|L}]YENY[C(Carbamidomethyl (C))Q] 4.574;4.0347;3.9239;3.7444;3.7444;3.3847;3.2051;3.2051;3.0943;2.7155 -;-;-;-;-;-;-;-;-;- 2599 1 1.583 110627.8 1.0 3012 5186 8194 HBL1_DMSO_200M_050219_1,8200 HBL1_DMSO_200M_050219_1,8200,LQDAGYYQC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8201 43.295 380.0 382830.0 25 0 18060.0 + 38715 TTVGKFEEA 9 172 491.24728013226223 980.4800073313244 2 491.2485229372978 MULTI CID FTMS 0 0 0 8194 457924.8125 0.5161235490447188 2 -0.1407814025878906 7 Unmodified _TTVGKFEEA_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 27.628801355627647 0.1796483985696185 3 [VG]K{M(Oxidation (M))|F}EE{[WS]|[C(Carbamidomethyl (C)){I|L}]} 8 4 + 33.365 0.0 0.0 3.4029 3.4029 73.28 0.0 0.0 0.0 3.253800256993955 3.253800256993955 3.253800256993955 3.253800256993955 0 0.0 1.3979400086720375 0.0 0.0 [VG]K{M(Oxidation (M))|F}EE{[WS]|[C(Carbamidomethyl (C)){I|L}]};[PS]V[HA]MGV[PS];[VG]K{M(Oxidation (M))|F}E{[MS]|[{M(Oxidation (M))|F}A]}[PS];[PS]V[HA]MR[PS];[VG]EK{M(Oxidation (M))|F}E{[WS]|[C(Carbamidomethyl (C)){I|L}]};[PS][Y{M(Oxidation (M))|F}]KGV[PS];[KG]V{M(Oxidation (M))|F}EE{[WS]|[C(Carbamidomethyl (C)){I|L}]};[VG]K{M(Oxidation (M))|F}T[MD][PS];[VG]EK{[YC]|[HE]}V[PS];[VG]EK{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}[PS] 3.4029;3.0711;2.8915;2.4048;2.3022;2.0456;1.9667;1.8715;1.7908;1.7908 -;-;-;-;-;-;-;-;-;- 1127 1 1.583 111098.4 1.0 3013 5186 8194 HBL1_DMSO_200M_050219_1,8201 HBL1_DMSO_200M_050219_1,8201,TTVGKFEEA False True TTVGKFEEA 43.295266 491.248522937298 4209210.0 8194.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 3.9295920530955 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8202 43.303 459.0 454690.0 25 0 46195.0 + 40447 VILEKATKV 9 209 334.21857901291185 999.6339076389356 3 334.2184936404228 MULTI CID FTMS 0 0 0 8194 383489.25 1.0 0 0.0 8 Unmodified _VILEKATKV_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7687207-7690948:-|nuORF 41.95555342248728 0.0647214845423414 3 V{I|L}{I|L}EKATKV 9 0 + 81.103 0.0 0.0 8.1133 8.1133 95.196 0.0 0.0 0.0 56.00064542781573 11.04335179343886 11.04335179343886 13.309932190414258 0 0.1923877696554315 2.0 0.75 0.4247425010840047 + + V{I|L}{I|L}EKATKV;V{I|L}{I|L}EKA[KS]{I|L};V{I|L}V[WR]TKV;V{I|L}V[WR][KS]{I|L} 8.1133;6.7818;4.9189;3.5875 +;-;-;- + 528 + 1 1.583 166004.4 1.0 3014 5186 8194 HBL1_DMSO_200M_050219_1,8202 HBL1_DMSO_200M_050219_1,8202,VILEKATKV True True VILEKATKV 43.303403 334.218493640423 1852499.5 8194.0 ENST00000595288.5_1_19:7687207-7690948:-|nuORF;;ENSG00000076924|ENST00000358368|XAB2 5.623658816019694 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8203 43.312 504.0 474130.0 25 0 67536.0 39991 VGCGAGHS 8 198 344.14719743954737 686.2798419458948 2 344.1465942263603 MULTI CID FTMS 0 0 0 8194 319837.90625 0.3755956152530056 1 -0.0625457763671875 9 Unmodified _VGCGAGHS_ ENSG00000129158|ENST00000265965|SERGEF;ENST00000528369.5_1_11:17809634-17961065:-|nuORF 5.230669730166228 0.792582437072536 3 V 1 7 12.892 0.0 0.0 1.8785 0.0 0.0 569.2003035321237 0.0 569.2003035321237 0.0 1.2986388483923328 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.0 + V 1.8785 + + 53 + 1 1.583 188923.9 1.0 3015 5186 8194 HBL1_DMSO_200M_050219_1,8203 HBL1_DMSO_200M_050219_1,8203,VGCGAGHS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8204 43.321 474.0 421270.0 25 0 41729.0 + 41039 VMINKATPY 9 154 526.7768293788532 1051.5391058245064 2 526.7762939333916 MULTI CID FTMS 0 0 0 8194 247337.921875 0.4562329693989872 -2 0.1241340637207031 10 Oxidation (M) _VM(Oxidation (M))INKATPY_ ENSG00000170906|ENST00000485876|NDUFA3 60.07390631473393 0.0260411565414776 3 {[QN]|[E{I|L}]|[KN]}{I|L}AT{M(Oxidation (M))|F}VPY 9 6 + 45.219 0.0 0.0 4.3002 4.3002 71.086 0.0 0.0 0.0 0.5842309438911997 6.274137844425724 0.5842309438911997 0.5842309438911997 0 0.6150219788552205 0.0 1.316901560044258 0.8609243748081782 {[QN]|[E{I|L}]|[KN]}{I|L}AT{M(Oxidation (M))|F}VPY;{[VA]|[{I|L}G]}GKAT{M(Oxidation (M))|F}VPY;[{M(Oxidation (M))|F}V]{I|L}NKATPY;[TA]KN{I|L}{M(Oxidation (M))|F}VPY;{[QV]|[N{I|L}]|[RA]|[KV]}KAT{M(Oxidation (M))|F}VPY;[{M(Oxidation (M))|F}V]{I|L}NKAT{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[KQ]T{M(Oxidation (M))|F}VPY;VV{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}VPY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VNKATPY;{[QN]|[E{I|L}]|[KN]}{I|L}A{M(Oxidation (M))|F}VTPY 4.3002;4.2447;3.7036;3.5989;3.5313;3.3867;3.3597;3.216;3.1879;3.0907 -;-;+;-;-;-;-;-;-;- + 2629 1 1.583 163842.0 1.0 3016 5186 8194 HBL1_DMSO_200M_050219_1,8204 HBL1_DMSO_200M_050219_1,8204,VMINKATPY True False VMINKATPY 43.320678 526.776293933392 5726870.0 8194.0 ENSG00000170906|ENST00000485876|NDUFA3 5.054954051971436 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8205 43.33 529.0 260430.0 25 0 32025.0 + 1372 ALADGVQKV 9 136 450.761561050385 899.50856916757 2 450.7622558474541 MULTI CID FTMS 0 0 0 8194 222952.921875 1.0 0 0.0 11 Unmodified _ALADGVQKV_ ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1;nc|ENSG00000100342|O14791-3|APOL1 37.97399986684836 0.0865783450051559 3 [{I|L}A]ADRQKV 8 2 + 72.813 0.0 0.0 8.0947 8.0947 89.197 0.0 0.0 0.0 26.989700043360195 5.149098156090631 5.149098156090631 5.149098156090631 0 0.4247425010840047 2.0 0.4247425010840047 0.6595680409956017 [{I|L}A]ADRQKV;[{I|L}A]ADRQVK;[{I|L}A]ADR[AG]KV;[{I|L}A]AD[VG]QKV;[{I|L}A]ADR[AG]VK;[{I|L}A]AD[VG]QVK;[{I|L}A]AD[VG][AG]KV;[{I|L}A]W[VG]QKV;[{I|L}A]AD[VG][AG]VK;[{I|L}A]W[VG]QVK 8.0947;7.5223;7.065;7.065;6.4926;6.4926;6.0413;5.8726;5.4689;5.3002 -;-;-;+;-;-;-;-;-;- + 386 + 1 1.583 112765.6 1.0 3017 5186 8194 HBL1_DMSO_200M_050219_1,8205 HBL1_DMSO_200M_050219_1,8205,ALADGVQKV True True ALADGVQKV 43.32997 450.762255847454 2515871.25 8194.0 nc|ENSG00000100342|O14791-2|APOL1;;ENSG00000100342|ENST00000397278|APOL1;;nc|ENSG00000100342|O14791-3|APOL1 6.28811248143514 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8207 43.334 10.0 4308600.0 25 0 594960.0 + 6808 EEAPSRPAL 9 62 485.25352147984665 968.4924900264932 2 485.2536804080009 MULTI CID FTMS 0 0 0 8206 5922167.5 0.6524764759246074 3 -0.2407913208007812 1 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 22.736283301280096 0.2418982879461534 3 EEAPSR 6 3 46.828 0.0 0.0 4.8351 0.0 0.0 0.0 296.16242395572505 296.16242395572505 35.40768243018421 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + EEAPSR 4.8351 + + 40 + 1 1.562 39339.7 1.0 3018 5187 8206 HBL1_DMSO_200M_050219_1,8207 HBL1_DMSO_200M_050219_1,8207,EEAPSRPAL False True EEAPSRPAL 43.334088 485.253680408001 172021344.0 8206.0 nc|ENSG00000173349|Q587I9|SFT2D3 7.144482930501302 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8208 43.335 36.0 1568500.0 25 0 139980.0 + 32315 RYIGKTMDY 9 87 573.783981090504 1145.5534092478078 2 573.7841064333916 MULTI CID FTMS 0 0 0 8206 1150814.375 0.2265438149025502 3 -0.2407913208007812 2 Unmodified _RYIGKTMDY_ ENSG00000143314|ENST00000361531|MRPL24;ENST00000478899.1_1_1:156707192-156707995:-|nuORF 29.081581746732265 0.1611639662936252 3 S[{I|L}P]GKTMDY 9 2 32.968 0.0 0.0 2.8779 0.0 0.0 135.06880385566564 0.0 135.06880385566564 0.0 15.73236183950876 0.0 0.0 0 0.6989700043360187 0.0 0.7059771852360797 0.3054621874040891 S[{I|L}P]GKTMDY 2.8779 - 100 1 1.562 45362.7 1.0 3019 5187 8206 HBL1_DMSO_200M_050219_1,8208 HBL1_DMSO_200M_050219_1,8208,RYIGKTMDY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8209 43.336 18.0 2885000.0 25 0 176540.0 + 12211 GQTGVIRSV 9 83 458.7637823617805 915.513011790361 2 458.7641174197197 MULTI CID FTMS 0 0 0 8206 2511624.75 0.6450059813853817 -1 0.0625457763671875 3 Unmodified _GQTGVIRSV_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 33.4449034751529 0.1114409586740657 3 {[QG]|[NA]}TGV{I|L}RSV 9 0 + 48.599 0.0 0.0 5.3084 5.3084 89.562 0.0 0.0 0.0 21.490794246723937 6.955999313992223 6.955999313992223 48.59874719473659 0 1.0 0.0 0.3807196863200844 0.0 + + {[QG]|[NA]}TGV{I|L}RSV 5.3084 + + 124 + 1 1.562 46114.4 1.0 3020 5187 8206 HBL1_DMSO_200M_050219_1,8209 HBL1_DMSO_200M_050219_1,8209,GQTGVIRSV True True GQTGVIRSV 43.336446 458.76411741972 21989536.0 8206.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 5.237233400344849 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8210 43.338 28.0 2987200.0 25 0 408850.0 + 22089 LPPPVAVRK 9 76 326.2149630110197 975.6230596332592 3 326.2148620486259 MULTI CID FTMS 0 0 0 8206 1905371.25 0.6609048209335933 -4 0.2837181091308594 4 Unmodified _LPPPVAVRK_ ENSG00000184271|ENST00000333640|POU6F1;nc|ENSG00000184271|Q14863|POU6F1 15.847184025352805 0.4077185912009129 3 {I|L}PPP 4 5 51.983 0.0 0.0 5.3281 0.0 0.0 0.0 568.3575104053322 568.3575104053322 41.01342204748164 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 + {I|L}PPP 5.3281 + + 31 + 1 1.562 73597.9 1.0 3021 5187 8206 HBL1_DMSO_200M_050219_1,8210 HBL1_DMSO_200M_050219_1,8210,LPPPVAVRK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8211 43.339 43.0 1230600.0 25 0 138210.0 + 45828 YYPDGNSQY 9 84 553.724360109036 1105.4341672848718 2 553.7249023318291 MULTI CID FTMS 0 0 0 8206 1337218.625 0.334119595758899 -6 0.4798774719238281 5 Unmodified _YYPDGNSQY_ nc|ENSG00000141380|Q15532-2|SS18 23.1484247019978 0.2366544122328345 3 YYGSQ 5 4 50.986 0.0 0.0 4.6123 0.0 0.0 0.0 504.1737052089531 504.1737052089531 33.998840264401125 0.0 0.0 0.0 0 0.5 2.0 0.805462187404089 0.3494850021680094 YYGSQ 4.6123 - 287 1 1.562 45534.5 1.0 3022 5187 8206 HBL1_DMSO_200M_050219_1,8211 HBL1_DMSO_200M_050219_1,8211,YYPDGNSQY False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8212 43.34 66.0 1396800.0 25 0 136410.0 + 35324 SSVENIQRV 9 113 516.2777916752176 1030.541030417235 2 516.2784911990166 MULTI CID FTMS 0 0 0 8206 1295458.5 0.971238280384594 -1 0.0625457763671875 6 Unmodified _SSVENIQRV_ ENSG00000173801|ENST00000393931|JUP 96.11092074494114 0.0124975504059861 3 {[CA]|SS}VE{I|L}NRVQ 9 3 + 75.135 0.0 0.0 7.2908 7.2908 79.822 0.0 0.0 0.0 7.147642715192504 5.745397123361968 5.745397123361968 0.2287874528033739 0 1.6237125054200234 0.0 0.4247425010840047 1.860924374808178 {[CA]|SS}VE{I|L}NRVQ;{[CA]|SS}VEN{I|L}RVQ;{[CA]|SS}VE{I|L}NVRQ;{[CA]|SS}VEN{I|L}VRQ;{[CA]|SS}VE{I|L}NQ[RV];{[CA]|SS}VEN{I|L}Q[RV];{[CA]|SS}VE{I|L}GGRVQ;{[CA]|SS}VEGG{I|L}RVQ;{[CA]|SS}VEVQRVQ;{[CA]|SS}VE{I|L}GGVRQ 7.2908;7.2686;7.1485;7.1263;6.7333;6.7111;6.3973;6.3751;6.3478;6.255 -;-;-;-;-;+;-;-;-;- + 1629 + 1 1.562 76812.8 1.0 3023 5187 8206 HBL1_DMSO_200M_050219_1,8212 HBL1_DMSO_200M_050219_1,8212,SSVENIQRV True True SSVENIQRV 43.34044 516.2786 8274902.5 8206.0 ENSG00000173801|ENST00000393931|JUP 5.909966309865316 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8213 43.342 54.0 1734400.0 25 0 260430.0 -1 ISSPDCNE 8 94 461.1848958338199 920.3552387344398 2 461.1850158572197 MULTI CID FTMS 0 0 0 8206 762736.8125 1.0 0 0.0 7 Carbamidomethyl (C) _ISSPDC(Carbamidomethyl (C))NE_ nc|ENSG00000013619|Q13495-3|MAMLD1 7.289230182591677 0.7800870086367542 3 {I|L}Q 2 -1 25.217 0.0 0.0 2.7399 0.0 0.0 0.0 676.1890148501649 676.1890148501649 13.1651564221918 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}Q 2.7399 - 76 + 1 1.562 76457.6 1.0 3024 5187 8206 HBL1_DMSO_200M_050219_1,8213 HBL1_DMSO_200M_050219_1,8213,ISSPDCNE False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8214 43.344 75.0 913840.0 25 0 90758.0 + 3606 DAASYVRKV 9 92 504.77718045400906 1007.539807974818 2 504.7766906619072 MULTI CID FTMS 0 0 0 8206 443888.71875 0.1999653661229608 -2 0.0935630798339843 8 Unmodified _DAASYVRKV_ ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A 40.72490554402381 0.0714771638475563 3 DAASYVKRV 9 2 + 67.345 0.0 0.0 6.6841 6.6841 94.009 0.0 0.0 0.0 40.45446031728132 5.238956344972934 5.238956344972934 47.44727494896693 0 1.2887254899964358 1.5228787452803376 0.0 0.0 DAASYVKRV;D[QT]YVKRV 6.6841;1.9748 -;- 164 + 1 1.562 56388.6 1.0 3025 5187 8206 HBL1_DMSO_200M_050219_1,8214 HBL1_DMSO_200M_050219_1,8214,DAASYVRKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8215 43.352 473.0 478380.0 25 0 28681.0 + 26378 NTAQGFRTV 9 194 497.25887405819856 992.5031951831972 2 497.2596618533134 MULTI CID FTMS 0 0 0 8206 400743.5 0.3369809715131889 -2 0.0935630798339843 9 Unmodified _NTAQGFRTV_ ENSG00000089127|ENST00000202917|OAS1;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1 69.33821966488729 0.021354776001734 3 NTAQG{M(Oxidation (M))|F}RTV 9 0 + 85.593 0.0 0.0 8.624 8.624 83.551 0.0 0.0 0.0 15.740312677277188 0.9275405323689796 0.9275405323689796 0.9275405323689796 0 1.1989700043360187 1.6989700043360187 0.531234684152075 0.9731975075880328 + + NTAQG{M(Oxidation (M))|F}RTV;NTAQG{M(Oxidation (M))|F}RS{I|L};NTA[AG]G{M(Oxidation (M))|F}RTV;NTA[AG]G{M(Oxidation (M))|F}RS{I|L};NTAQR[Y{I|L}]Q;NTAQR[YQ]{I|L};NTQQ{M(Oxidation (M))|F}RTV;NTA[AG]R[Y{I|L}]Q;NTA[AG]R[YQ]{I|L};NTQQ{M(Oxidation (M))|F}RS{I|L} 8.624;8.5305;7.6962;7.6027;6.0235;5.9881;5.1458;5.0903;5.0548;5.0524 +;-;-;-;-;-;-;-;-;- + 2213 + 1 1.562 171831.5 1.0 3026 5187 8206 HBL1_DMSO_200M_050219_1,8215 HBL1_DMSO_200M_050219_1,8215,NTAQGFRTV True True NTAQGFRTV 43.351909 497.259661853313 16466788.0 8206.0 ENSG00000089127|ENST00000202917|OAS1;;nc|ENSG00000089127|P00973-2|OAS1;;nc|ENSG00000089127|P00973-3|OAS1;;nc|ENSG00000089127|P00973-4|OAS1 8.192087014516195 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8216 43.355 135.0 664820.0 25 0 48023.0 + 16177 IVDPQNQTM 9 111 523.2534763230992 0 523.2553588747978 PEAK CID FTMS 0 0 0 8206 386678.46875 0.4745516774071615 -1 0.0625457763671875 10 Unmodified _IVDPQNQTM_ ENSG00000169230|ENST00000303204|PRELID1;ENST00000511309.5_1_5:176730986-176733129:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1 36.12702656103203 0.0807574182900477 3 V 1 8 10.485 0.0 0.0 1.0038 0.0 0.0 717.3126949784265 225.0886171930297 942.4013121714562 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + V 1.0038 + + 196 + 1 1.562 73541.7 1.0 3027 5187 8206 HBL1_DMSO_200M_050219_1,8216 HBL1_DMSO_200M_050219_1,8216,IVDPQNQTM True True IVDPQNQTM 43.354652 523.255358874798 9454604.0 8206.0 ENST00000511309.5_1_5:176730986-176733129:+|nuORF;;ENSG00000169230|ENST00000303204|PRELID1;;nc|ENSG00000169230|Q9Y255-2|PRELID1 5.538663546244304 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8217 43.359 209.0 534150.0 25 0 45153.0 + 3871 DAKSTSIQV 9 118 474.7533024933875 947.492052053575 2 474.7530090212822 MULTI CID FTMS 0 0 0 8206 329238.21875 0.2104982233282254 -2 0.0935630798339843 11 Unmodified _DAKSTSIQV_ ENSG00000076242|ENST00000231790|MLH1;ENST00000435176.5_1_3:37035370-37045944:+|nuORF;ENST00000454028.5_1_3:37035144-37045944:+|nuORF;ENST00000458205.6_1_3:37035370-37038667:+|nuORF;ENST00000466900.5_1_3:37035370-37047454:+|nuORF;ENST00000539477.5_1_3:37035370-37053334:+|nuORF 56.17704186161178 0.0281986971544335 3 {[DA]|[EG]}KS{[MG]|[TS]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 46.99 0.0 0.0 4.9594 4.9594 80.031 0.0 0.0 0.0 5.081554884596301 7.147642715192504 5.081554884596301 5.081554884596301 0 0.3807196863200844 1.6989700043360187 1.3851518780601924 0.0 + + {[DA]|[EG]}KS{[MG]|[TS]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VSS{[MG]|[TS]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[VA]|[{I|L}G]}GSS{[MG]|[TS]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[DA]|[EG]}KA{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}NS{[MG]|[TS]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}SS{[MG]|[TS]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VSA{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}D[{M(Oxidation (M))|F}V]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[VA]|[{I|L}G]}GSA{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[DA]|[EG]}AK{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 4.9594;4.4231;4.1921;3.9806;3.6757;3.484;3.4443;3.322;3.2133;3.1091 +;-;-;-;-;-;-;-;-;- + 1099 1 1.562 95393.1 1.0 3028 5187 8206 HBL1_DMSO_200M_050219_1,8217 HBL1_DMSO_200M_050219_1,8217,DAKSTSIQV True True DAKSTSIQV 43.358609 474.753009021282 19652704.0 8206.0 ENST00000466900.5_1_3:37035370-37047454:+|nuORF;;ENST00000539477.5_1_3:37035370-37053334:+|nuORF;;ENST00000458205.6_1_3:37035370-37038667:+|nuORF;;ENST00000454028.5_1_3:37035144-37045944:+|nuORF;;ENST00000435176.5_1_3:37035370-37045944:+|nuORF;;ENSG00000076242|ENST00000231790|MLH1 6.105809847513835 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8218 43.368 556.0 292360.0 25 0 36545.0 + + 22167 LPPPTARV 8 157 425.7608368711503 849.5071208091006 2 425.7615844607353 MULTI CID FTMS 0 0 0 8206 334385.625 0.1956935044037686 10 -0.6776809692382812 12 Unmodified _LPPTLPGR_ ENST00000511502.5_1_1:1563180-1563657:+|nuORF 26.88365393820708 0.4786498634179528 3 {I|L}PPP 4 -1 54.302 0.0 0.0 6.3921 0.0 0.0 0.0 442.2434176080688 442.2434176080688 43.192423875687126 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.0 0.0 {I|L}PPP 6.3921 - 147 + 1 1.562 127745.0 1.0 3029 5187 8206 HBL1_DMSO_200M_050219_1,8218 HBL1_DMSO_200M_050219_1,8218,LPPTLPGR False False LPPPTARV 43.368359 425.761584460735 27671698.0 8206.0 ENST00000511502.5_1_1:1563180-1563657:+|nuORF 1.6808181007703145 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8219 43.371 125.0 705550.0 25 0 57954.0 19419 LETPYYLV 8 127 499.2669171026152 996.5192812720304 2 499.7694579958916 MULTI CID FTMS 0 0 0 8206 298886.875 0.9142827099509372 -1 0.0625457763671875 13 Unmodified _LETPYYLV_ ENSG00000135519|ENST00000257981|KCNH3 15.768221252438446 0.6779680726941459 3 Q{[QD]|[EN]|[WG]|[KD]|[RS]}K[PG]EPV 9 6 + 22.592 0.0 0.0 2.2671 2.2671 69.583 0.0 0.0 0.0 2.1345455443204777 3.3559900157190192 2.1345455443204777 2.284317563787681 0 1.0819755355160707 0.0 0.5451140161145328 0.0 Q{[QD]|[EN]|[WG]|[KD]|[RS]}K[PG]EPV;[{I|L}P]{[WT]|[RM]}[VG]EPV;Q{[QD]|[EN]|[WG]|[KD]|[RS]}K[WP]PV;Q{[QD]|[EN]|[WG]|[KD]|[RS]}K[EP]GPV;[{I|L}P]{[WT]|[RM]}{NN|[MP]|[D{I|L}]|[EV]}GPV;QP{[WT]|[RM]}[RN]PV 2.2671;2.0379;0.56826;0.50125;0.27202;0.066512 -;-;-;-;-;- 522 + 1 1.562 69869.4 1.0 3030 5187 8206 HBL1_DMSO_200M_050219_1,8219 HBL1_DMSO_200M_050219_1,8219,LETPYYLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8220 43.381 555.0 528810.0 25 0 37479.0 + 21990 LPPPGVRKI 9 176 488.81871439729207 975.6228758613842 2 488.8192626833916 MULTI CID FTMS 0 0 0 8206 282888.875 0.6364767522659662 -3 0.1866798400878906 14 Unmodified _LPPPGVRKI_ ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54566383-54570502:-|nuORF 36.04419817259434 0.0971720506436186 3 {I|L}PPP 4 5 59.993 0.0 0.0 6.1492 0.0 0.0 0.0 568.3605440729124 568.3605440729124 19.7273429256591 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + {I|L}PPP 6.1492 + + 2167 + 1 1.562 222971.1 1.0 3031 5187 8206 HBL1_DMSO_200M_050219_1,8220 HBL1_DMSO_200M_050219_1,8220,LPPPGVRKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8221 43.392 627.0 414880.0 25 0 17990.0 + 30186 QVVEEIRQA 9 212 536.2936989781141 1070.572845023028 2 536.2952758669853 MULTI CID FTMS 0 0 0 8206 181074.40625 1.0 0 0.0 15 Unmodified _QVVEEIRQA_ ENSG00000121211|ENST00000240488|MND1 51.629811660486645 0.0367964933207742 3 QVVEE{I|L}RQA 9 0 + 73.993 0.0 0.0 6.9115 6.9115 91.878 0.0 0.0 0.0 50.5813412662379 3.725931801341673 3.725931801341673 11.07000627676549 0 0.4332070678992465 2.0 0.805462187404089 0.714559192431053 + + QVVEE{I|L}RQA;QVVEE{I|L}R[AG]A;QVVE[KQ]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P;QVVH{[VA]|[{I|L}G]}QKY;QVVE[KQ]AAQA;QVV{M(Oxidation (M))|F}[WK]PPA;QVV{M(Oxidation (M))|F}[WK]PAP;QVVH{[VA]|[{I|L}G]}[AG]KY;QV{M(Oxidation (M))|F}V[WK]PPA;QV{M(Oxidation (M))|F}V[WK]PAP 6.9115;5.8775;4.3676;3.4982;3.4508;3.0932;2.9961;2.6381;2.4403;2.3433 +;-;-;-;-;-;-;-;-;- + 1032 + 1 1.562 202739.7 1.0 3032 5187 8206 HBL1_DMSO_200M_050219_1,8221 HBL1_DMSO_200M_050219_1,8221,QVVEEIRQA True True QVVEEIRQA 43.391594 536.2946 2054807.625 8206.0 ENSG00000121211|ENST00000240488|MND1 5.238334019978841 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8222 43.405 704.0 276010.0 25 0 13213.0 + 26382 NTDEPCEE 8 216 468.6676265856637 935.3207002381272 2 468.6674987673759 MULTI CID FTMS 0 0 0 8206 161693.78125 0.9165139424182718 1 -0.0782356262207031 16 Unmodified _NTDEPCEE_ REV__ENST00000519853.5_3_8:41455866-41456797:+|nuORF;REV__ENST00000521184.1_1_8:41455866-41456016:+|nuORF 4.3292370932331545 0.7980541185046766 3 {[QG]|[NA]}T 3 -1 27.222 0.0 0.0 2.9105 0.0 0.0 0.0 646.1694620948939 646.1694620948939 12.696727847285064 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.6307196863200843 {[QG]|[NA]}T 2.9105 - 412 1 1.562 145507.8 1.0 3033 5187 8206 HBL1_DMSO_200M_050219_1,8222 HBL1_DMSO_200M_050219_1,8222,NTDEPCEE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8223 43.408 164.0 854430.0 25 0 90658.0 + 16168 IVDKSGVVRV 10 119 357.8886887516056 1070.644236855017 3 358.2233154177666 MULTI CID FTMS 0 0 0 8206 170099.0625 0.1770536870644706 -2 0.0935630798339843 17 Unmodified _IVDKSGVVRV_ ENSG00000102081|ENST00000370475|FMR1;ENSG00000114416|ENST00000357559|FXR1;ENSG00000129245|ENST00000250113|FXR2;ENST00000571079.1_1_17:7497531-7497639:-|nuORF;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-9|FMR1;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1 36.506200033944 0.1944608063770638 3 {I|L}VDKSG 6 4 75.851 0.0 0.0 7.0846 0.0 0.0 0.0 468.2932521194223 468.2932521194223 67.89258754269092 0.0 0.0 0.0 0 0.1861818737241735 2.0 1.274227503252014 0.4247425010840047 + {I|L}VDKSG 7.0846 + + 320 + 1 1.562 119802.0 1.0 3034 5187 8206 HBL1_DMSO_200M_050219_1,8223 HBL1_DMSO_200M_050219_1,8223,IVDKSGVVRV False True IVDKSGVVRV 43.4082 358.223315417767 8743480.0 8206.0 nc|ENSG00000102081|Q06787-4|FMR1;;nc|ENSG00000102081|Q06787-10|FMR1;;ENSG00000114416|ENST00000357559|FXR1;;nc|ENSG00000102081|Q06787-9|FMR1;;nc|ENSG00000102081|Q06787-5|FMR1;;nc|ENSG00000114416|P51114-2|FXR1;;nc|ENSG00000102081|Q06787-3|FMR1;;ENST00000571079.1_1_17:7497531-7497639:-|nuORF;;ENSG00000129245|ENST00000250113|FXR2;;ENSG00000102081|ENST00000370475|FMR1;;nc|ENSG00000114416|P51114-3|FXR1;;nc|ENSG00000102081|Q06787-8|FMR1;;nc|ENSG00000102081|Q06787-7|FMR1;;nc|ENSG00000102081|Q06787-2|FMR1;;nc|ENSG00000102081|Q06787-6|FMR1;;nc|ENSG00000102081|Q06787-11|FMR1 3.224214235941569 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8225 43.413 48.0 1040100.0 25 0 126300.0 + 21443 LPHHRVIEV 9 80 367.2174237042729 1098.6304417130186 3 367.2172424197197 MULTI CID FTMS 0 0 0 8224 1064595.875 0.0379035366208827 5 -0.3215370178222656 1 Unmodified _LPHHRVIEV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 10.823927491677226 0.5436922275383211 3 EHP[{I|L}V] 5 6 20.713 0.0 0.0 1.8854 0.0 0.0 505.3141651837906 0.0 505.3141651837906 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 EHP[{I|L}V] 1.8854 - 75 1 1.541 50276.4 1.0 3035 5188 8224 HBL1_DMSO_200M_050219_1,8225 HBL1_DMSO_200M_050219_1,8225,LPHHRVIEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8226 43.414 38.0 894560.0 25 0 131910.0 -1 QSVVENCTM 9 76 534.2287425355445 1066.4429321378889 2 534.2288696169853 MULTI CID FTMS 0 0 0 8224 1230570.375 0.623308492326792 2 -0.1625556945800781 2 Carbamidomethyl (C) _QSVVENC(Carbamidomethyl (C))TM_ ENST00000551276.1_1_12:56706564-56708983:-|nuORF 24.99096001346401 0.2132109383330889 3 {[QS]|[NT]}VV 4 -1 40.129 0.0 0.0 3.7629 0.0 0.0 0.0 650.192449310017 650.192449310017 26.633962059085896 0.0 0.0 0.0 0 0.9247425010840048 1.0457574905606752 0.1923877696554315 0.3807196863200844 {[QS]|[NT]}VV 3.7629 + + 82 1 1.541 31646.8 1.0 3036 5188 8224 HBL1_DMSO_200M_050219_1,8226 HBL1_DMSO_200M_050219_1,8226,QSVVENCTM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8227 43.415 18.0 2488700.0 25 0 189820.0 + 44549 YPESVGREV 9 61 518.2585837006741 1034.502614468148 2 518.2590209841728 MULTI CID FTMS 0 0 0 8224 2646555.5 0.1107628839246059 -3 0.1717987060546875 3 Unmodified _YPESVGREV_ ENSG00000170471|ENST00000262879|RALGAPB;nc|ENSG00000170471|Q86X10-3|RALGAPB;nc|ENSG00000170471|Q86X10-4|RALGAPB 26.268140514670165 0.1969607489560049 3 YPESV 5 4 64.737 0.0 0.0 6.2578 0.0 0.0 0.0 456.22275720767817 456.22275720767817 59.25250945692483 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.805462187404089 0.0 + YPESV 6.2578 + + 67 + 1 1.541 41428.6 1.0 3037 5188 8224 HBL1_DMSO_200M_050219_1,8227 HBL1_DMSO_200M_050219_1,8227,YPESVGREV False True YPESVGREV 43.415052 518.259020984173 425659776.0 8224.0 nc|ENSG00000170471|Q86X10-3|RALGAPB;;ENSG00000170471|ENST00000262879|RALGAPB;;nc|ENSG00000170471|Q86X10-4|RALGAPB 6.195755481719971 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8228 43.417 70.0 635220.0 25 0 55060.0 + 24143 LYQKEVSHL 9 74 558.8058577199879 1115.5971625067757 2 558.8061401247978 MULTI CID FTMS 0 0 0 8224 857470.625 1.0 0 0.0 4 Unmodified _LYQKEVSHL_ ENSG00000062822|ENST00000440232|POLD1;ENST00000596221.1_1_19:50920282-50921201:+|nuORF;ENST00000597963.5_1_19:50919583-50921201:+|nuORF 60.07390631473393 0.0260411565414776 3 {I|L}YQKEVS[H{I|L}] 9 0 + 89.377 0.0 0.0 8.0116 8.0116 93.185 0.0 0.0 0.0 76.2781282840541 4.762036441594191 4.762036441594191 9.208187539523747 0 1.024227503252014 2.0 0.7302046884880937 0.5 + + {I|L}YQKEVS[H{I|L}];{I|L}Y[AG]KEVS[H{I|L}] 8.0116;7.1862 +;- + 147 + 1 1.541 41186.2 1.0 3038 5188 8224 HBL1_DMSO_200M_050219_1,8228 HBL1_DMSO_200M_050219_1,8228,LYQKEVSHL True True LYQKEVSHL 43.416715 558.806140124798 8434082.0 8224.0 ENST00000596221.1_1_19:50920282-50921201:+|nuORF;;ENST00000597963.5_1_19:50919583-50921201:+|nuORF;;ENSG00000062822|ENST00000440232|POLD1 6.85916821161906 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8229 43.418 63.0 770920.0 25 0 50361.0 + 12047 GQDVGRYQV 9 76 511.2564897483176 1020.4984265634351 2 511.2567016482353 MULTI CID FTMS 0 0 0 8224 788607.8125 0.048555181345587 -3 0.1717987060546875 5 Unmodified _GQDVGRYQV_ ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF 27.628801355627647 0.1796483985696185 3 {[QG]|[NA]}DVQ 5 4 36.466 0.0 0.0 3.5733 0.0 0.0 0.0 490.2357882135376 490.2357882135376 27.290723632605243 0.0 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 {[QG]|[NA]}DVQ 3.5733 - 75 + 1 1.541 44530.2 1.0 3039 5188 8224 HBL1_DMSO_200M_050219_1,8229 HBL1_DMSO_200M_050219_1,8229,GQDVGRYQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8230 43.42 73.0 717750.0 25 0 93870.0 + 36290 SYIDRDSEY 9 76 574.248613853511 1146.4826747738218 2 574.2484008669853 MULTI CID FTMS 0 0 0 8224 625245.5 0.6178924638256379 1 -0.0971336364746093 6 Unmodified _SYIDRDSEY_ ENSG00000174953|ENST00000496811|DHX36;ENST00000491011.1_1_3:154032747-154042037:-|nuORF;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 15.738622578938676 0.4106572216562794 3 YSY 3 6 25.49 0.0 0.0 2.2233 0.0 0.0 715.3170033185562 0.0 715.3170033185562 0.0 5.044321917401078 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 YSY 2.2233 - 37 1 1.541 43937.2 1.0 3040 5188 8224 HBL1_DMSO_200M_050219_1,8230 HBL1_DMSO_200M_050219_1,8230,SYIDRDSEY False True SYIDRDSEY 43.419983 574.248400866985 10433465.0 8224.0 nc|ENSG00000174953|Q9H2U1-2|DHX36;;ENST00000491011.1_1_3:154032747-154042037:-|nuORF;;ENSG00000174953|ENST00000496811|DHX36;;nc|ENSG00000174953|Q9H2U1-3|DHX36 8.377340316772461 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8231 43.429 517.0 260790.0 25 0 31478.0 -1 0 74 1114.4455749141466 3340.31489534264 3 1115.117602527142 MULTI CID FTMS 0 0 0 8224 475630.90625 0.6539172291989236 -2 0.1407814025878906 7 3 Y{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}C(Carbamidomethyl (C))Y 6 -1 7.8803 0.0 0.0 0.23592 0.0 0.0 945.3307167311148 1556.6735323541627 2502.004249085277 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}C(Carbamidomethyl (C))Y 0.23592 - 53 + 1 1.541 103806.1 1.0 3041 5188 8224 HBL1_DMSO_200M_050219_1,8231 HBL1_DMSO_200M_050219_1,8231, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8232 43.431 106.0 807320.0 25 0 87300.0 + 3608 DAASYVRKV 9 99 336.8537151175834 1007.5393159529503 3 336.8536559939384 MULTI CID FTMS 0 0 0 8224 452585.9375 0.4588868555527376 -1 0.0782356262207031 8 Unmodified _DAASYVRKV_ ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A 16.565877749689598 0.3882643987948875 3 {[DA]|[EG]}ASYV 6 3 56.471 0.0 0.0 5.6048 0.0 0.0 0.0 398.2527689517427 398.2527689517427 41.32068444291761 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 + {[DA]|[EG]}ASYV 5.6048 + + 124 + 1 1.541 74670.0 1.0 3042 5188 8224 HBL1_DMSO_200M_050219_1,8232 HBL1_DMSO_200M_050219_1,8232,DAASYVRKV False True DAASYVRKV 43.431377 336.853655993938 17694263.0 8224.0 ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 1.806249737739563 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8233 43.441 553.0 148720.0 25 0 12081.0 33225 SFMDVSNPFYQ 11 105 675.7880155838826 1349.5614782345651 2 675.7877685427666 MULTI CID FTMS 0 0 0 8224 271702.28125 0.6719949031951797 -2 0.1407814025878906 9 Oxidation (M) _SFM(Oxidation (M))DVSNPFYQ_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 40.23920728925047 0.2087110615831976 3 [HD]EAQQNA{M(Oxidation (M))|F}YQ 11 7 + 91.496 0.0 0.0 6.7797 6.7797 89.391 0.0 0.0 0.0 3.872735630574084 79.81351030284446 3.872735630574084 9.128498242810991 0 1.3807196863200843 0.0 0.3054621874040891 1.089136830878453 [HD]EAQQNA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QNA{M(Oxidation (M))|F}YQ;[HD]EAQQGGA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]NA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QGGA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QNA{M(Oxidation (M))|F}YQ;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QGGA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K][AG]NA{M(Oxidation (M))|F}YQ 6.7797;6.1033;6.1033;6.1033;5.4291;5.4291;5.421;5.2515;4.7419;4.7419 -;-;-;-;-;-;-;-;-;- 780 1 1.541 65555.3 1.0 3043 5188 8224 HBL1_DMSO_200M_050219_1,8233 HBL1_DMSO_200M_050219_1,8233,SFMDVSNPFYQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8234 43.451 563.0 307910.0 25 0 15917.0 + 29234 GQTPVFSKA 9 171 467.7532186533596 933.4918843735192 2 467.7542297244072 MULTI CID FTMS 0 0 0 8224 241373.3125 0.3355202246176784 -4 0.2649154663085937 10 Unmodified _QGTAKTVMV_ ENSG00000142676|ENST00000643754|RPL11;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;nc|ENSG00000142676|P62913-2|RPL11 41.8396318013385 0.0653578398400075 3 {[QG]|[NA]}TPV{M(Oxidation (M))|F}SKA 9 6 + 51.207 0.0 0.0 5.4856 5.4856 89.279 0.0 0.0 0.0 25.04407045351695 5.144976600201872 5.144976600201872 23.592418498200555 0 0.9247425010840048 1.0 0.5 0.1462566630072955 {[QG]|[NA]}TPV{M(Oxidation (M))|F}SKA;{[QG]|[NA]}TA[{I|L}T][KC]{I|L};[VP]{M(Oxidation (M))|F}ST[RD]{I|L};[VP]T[PG]V[HD]{I|L};[VP]{M(Oxidation (M))|F}SK[TA]NA;[KS]QST[RD]{I|L};[VP]{M(Oxidation (M))|F}ST[KA]NA;[AG][KS]ST[RD]{I|L};[VP]T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD]{I|L};[TP]V[PG]V[HD]{I|L} 5.4856;2.9582;2.0957;1.7197;1.3525;1.3076;1.1148;0.95529;0.92191;0.88247 -;-;-;-;-;-;-;-;-;- 590 + 1 1.541 134609.9 1.0 3044 5188 8224 HBL1_DMSO_200M_050219_1,8234 HBL1_DMSO_200M_050219_1,8234,QGTAKTVMV True False GQTPVFSKA 43.450967 467.754229724407 15858141.0 8224.0 ENSG00000142676|ENST00000643754|RPL11;;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;;nc|ENSG00000142676|P62913-2|RPL11 6.360817909240723 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8235 43.46 537.0 297880.0 25 0 24884.0 + -1 GAPYRHVWT 9 144 564.785403473258 1127.556254013316 2 564.7860595583916 MULTI CID FTMS 0 0 0 8224 257497.9375 0.763671450340476 -2 0.1407814025878906 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))GAPYRHVWT_ REV__ENST00000264644.10_1_17:38333422-38337880:+|nuORF 21.74664581756881 0.2544899275067181 3 PQD 3 -1 33.817 0.0 0.0 2.9992 0.0 0.0 170.0670374931454 614.3278876918213 784.3949251849667 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.5629529932484498 0.7742275032520141 PQD 2.9992 - 350 + 1 1.541 125444.6 1.0 3045 5188 8224 HBL1_DMSO_200M_050219_1,8235 HBL1_DMSO_200M_050219_1,8235,GAPYRHVWT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8236 43.47 562.0 346360.0 25 0 24992.0 + 3370 AYQEARGVAM 10 153 548.2666737772222 1094.5187946212443 2 548.2671386599541 MULTI CID FTMS 0 0 0 8224 200841.84375 0.5821397784587035 -2 0.1407814025878906 12 Unmodified _AYQEARGVAM_ ENSG00000132182|ENST00000254508|NUP210;ENST00000479519.5_1_3:13393312-13395748:-|nuORF;nc|ENSG00000132182|Q8TEM1-2|NUP210 65.47368725323818 0.0222277162070287 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[Q{I|L}]EAAAM 10 5 + 66.833 0.0 0.0 6.1061 6.1061 76.105 0.0 0.0 0.0 14.285437214322345 54.67100689301704 14.285437214322345 0.1138423219442756 0 1.674742501084005 2.0 0.3252574989159953 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[Q{I|L}]EAAAM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA[Q{I|L}]DGVAM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[Q{I|L}]DGVAM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GRREAAAM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA[Q{I|L}]EAAAM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA[Q{I|L}]DRAM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[KG]{[QG]|[NA]}AAAM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA[KG][NG]GVAM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[Q{I|L}]DRAM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q{[QG]|[NA]}[KG]AAAM 6.1061;6.0957;5.8545;5.8334;5.7711;5.77;5.6054;5.5983;5.5327;5.4313 -;-;-;-;-;-;-;-;-;- 2545 1 1.541 150470.5 1.0 3046 5188 8224 HBL1_DMSO_200M_050219_1,8236 HBL1_DMSO_200M_050219_1,8236,AYQEARGVAM True True AYQEARGVAM 43.470283 548.267138659954 2176380.25 8224.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENST00000479519.5_1_3:13393312-13395748:-|nuORF;;ENSG00000132182|ENST00000254508|NUP210 7.009450435638428 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8237 43.482 699.0 89789.0 25 0 8101.4 -1 0 54 926.7350952029228 0 926.7350952029228 PEAK CID FTMS 0 0 0 -1 0 13 3 P 1 -1 6.9897 0.0 0.0 0.37752 0.0 0.0 1139.1179432361205 612.2652071588499 1751.3831503949705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.37752 - 20 + 1 1.541 55065.8 1.0 3047 5188 8224 HBL1_DMSO_200M_050219_1,8237 HBL1_DMSO_200M_050219_1,8237, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8238 43.495 624.0 299540.0 25 0 16405.0 + -1 VLYHYVAVNNPKKQE 15 154 601.3243282900289 1800.9511554702867 3 601.6594726443291 MULTI CID FTMS 0 0 0 8224 148112.890625 0.3948588589078944 -2 0.1407814025878906 14 ENSG00000228474|ENST00000456793|OST4 3 V{I|L}YHYVAVNNPKKQE 15 -1 + 148.12 0.0 0.0 8.2247 8.2247 92.559 0.0 0.0 0.0 112.22319871506392 19.39426919546068 19.39426919546068 9.030899869919438 0 2.9291746928241125 2.0 0.5283773187068795 2.079689690656103 V{I|L}YHYVAVNNPKKQE;V{I|L}YHYVAVNGGPKKQE;V{I|L}YHYVAVGGNPKKQE;V{I|L}YHYVAVNNPKK[AG]E;V{I|L}YHYVAVGGGGPKKQE;V{I|L}YHYVAVGGNPKK[AG]E;V{I|L}YHYVAVNGGPKK[AG]E;V{I|L}YHY[R{I|L}]NNPKKQE;V{I|L}YHYVAVNNPVVAM{I|L};V{I|L}YH{[ET]|[MV]}NV{I|L}MVVKQE 8.2247;7.7232;7.7232;7.571;7.2227;7.0705;7.0705;6.7859;6.7822;6.7028 -;-;-;-;-;-;-;-;-;- 42088 + 1 1.541 138850.7 1.0 3048 5188 8224 HBL1_DMSO_200M_050219_1,8238 HBL1_DMSO_200M_050219_1,8238, False False VLYHYVAVNNPKKQE 43.49451 601.3255 2598730.5 8224.0 ENSG00000228474|ENST00000456793|OST4 12.0029083887736 3.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8239 43.505 619.0 145360.0 25 0 27670.0 + 2982 AVIERFREG 9 108 538.7958362148421 1075.577119496484 2 538.7966796755791 MULTI CID FTMS 0 0 0 8224 155915.75 1.0 0 0.0 15 Unmodified _AVIERFREG_ ENSG00000157349|ENST00000288071|DDX19B;ENSG00000168872|ENST00000302243|DDX19A;ENST00000562140.2_1_16:70398455-70404584:+|nuORF;ENST00000569319.5_1_16:70399881-70405886:+|nuORF;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;nc|ENSG00000168872|Q9NUU7-2|DDX19A;nc|ENSG00000260537|Q9UMR2-2|DDX19B;nc|ENSG00000260537|Q9UMR2-3|DDX19B;nc|ENSG00000260537|Q9UMR2-4|DDX19B 10.823927491677226 0.5436922275383211 3 EG[KP] 4 8 15.177 0.0 0.0 1.4111 0.0 0.0 646.3179798810562 0.0 646.3179798810562 0.0 3.527848686805476 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 EG[KP] 1.4111 - 258 1 1.541 77774.9 1.0 3049 5188 8224 HBL1_DMSO_200M_050219_1,8239 HBL1_DMSO_200M_050219_1,8239,AVIERFREG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8241 43.51 79.0 579820.0 25 0 100730.0 + 8521 ETEHEPCML 9 71 544.7223313005735 1087.430109667947 2 544.7228881716728 MULTI CID FTMS 0 0 0 8240 1048658.375 0.5032638824484014 2 -0.112030029296875 1 Unmodified _ETEHEPCML_ REV__ENSG00000152503|ENST00000513154|TRIM36;REV__nc|ENSG00000152503|Q9NQ86|TRIM36 8.593279151180031 0.6146971463335029 3 {I|L} 1 -1 14.604 0.0 0.0 1.343 0.0 0.0 956.3349691423596 0.0 956.3349691423596 0.0 3.1330968166734827 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.343 + + 50 + 1 1.523 42323.1 1.0 3050 5189 8240 HBL1_DMSO_200M_050219_1,8241 HBL1_DMSO_200M_050219_1,8241,ETEHEPCML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8242 43.512 27.0 1598100.0 25 0 207990.0 + 32281 RWPKKSAEF 9 86 383.5450870782333 1147.6134318349 3 383.5450622439384 MULTI CID FTMS 0 0 0 8240 1675585.0 0.4293111781912273 8 -0.5023117065429688 2 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 14.838274106304384 0.4350285940865338 3 PP{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F} 5 7 24.08 0.0 0.0 2.0983 0.0 0.0 571.3794422834 0.0 571.3794422834 0.0 3.0675580493002315 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PP{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F} 2.0983 - 30 1 1.523 42766.0 1.0 3051 5189 8240 HBL1_DMSO_200M_050219_1,8242 HBL1_DMSO_200M_050219_1,8242,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8243 43.513 14.0 3643900.0 25 0 843040.0 + 3273 AYHGHGVSAF 10 70 349.16652612607004 1044.47774897841 3 349.1663696169853 MULTI CID FTMS 0 0 0 8240 3439489.5 0.242430055244195 -3 0.2379150390625 3 Unmodified _AYHGHGVSAF_ ENST00000429772.6_1_12:48357436-48358078:+|nuORF;ENST00000550146.5_1_12:48357374-48358078:+|nuORF 18.13498045792455 0.5432546531930572 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}KW{M(Oxidation (M))|F} 8 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}KW + + 15.485 17.323 1.9699 1.4825 1.4825 48.523 0.0 0.0 0.0 0.0 -8.327731244245342 -8.327731244245342 0.0 0 0.0 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}KW{M(Oxidation (M))|F} 1.4825 - 47 + 1 1.523 45303.7 1.0 3052 5189 8240 HBL1_DMSO_200M_050219_1,8243 HBL1_DMSO_200M_050219_1,8243,AYHGHGVSAF False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8244 43.515 113.0 750910.0 25 0 122770.0 + 45777 YYKPDSPEY 9 97 581.2584478872894 1160.5023428413788 2 581.2588989138603 MULTI CID FTMS 0 0 0 8240 787235.1875 0.0734243306181908 -5 0.3620491027832031 4 Unmodified _YYKPDSPEY_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 62.57269311338072 0.0246576765497938 3 YYK[DP]S[EP]Y 9 0 + 77.33 0.0 0.0 6.6635 6.6635 91.579 0.0 0.0 0.0 29.20110485363452 14.542425094393252 14.542425094393252 12.7913242800512 0 1.3494850021680094 2.0 1.575257498915995 0.0 + + YYK[DP]S[EP]Y;YYVVEYYY;YYK[DP]S[YE]P;[EP]S[DP]KYYY;[DP]SKPEYYY;[DP]S[EP]KYYY;[DP]T[DP]KYYY;YY[QA]K{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}MP;[DP]NVVEYYY;YYK[QA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}MP 6.6635;5.5612;5.4103;5.3478;4.7764;4.7588;4.5839;4.5745;4.4939;4.2684 +;-;-;-;-;-;-;-;-;- + 944 + 1 1.523 68939.6 1.0 3053 5189 8240 HBL1_DMSO_200M_050219_1,8244 HBL1_DMSO_200M_050219_1,8244,YYKPDSPEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8245 43.518 162.0 463800.0 25 0 53587.0 + 5924 DQAELITVPQ 10 104 557.2926759022452 1112.5707988712902 2 557.2925292849541 MULTI CID FTMS 0 0 0 8240 525799.875 0.5918914760304228 -3 0.2379150390625 5 Unmodified _DQAELITVPQ_ REV__ENSG00000183111|ENST00000333677|ARHGEF37 10.073929032068715 0.6785112666868882 3 [{I|L}P]AASQ[WR]{[QG]|[NA]} 10 -1 + 28.055 0.0 0.0 2.5217 2.5217 77.436 0.0 0.0 0.0 7.102868501927873 18.22228114217922 7.102868501927873 9.164539485499247 0 0.5 0.8239087409443188 0.4247425010840047 0.4247425010840047 [{I|L}P]AASQ[WR]{[QG]|[NA]};[{I|L}P]AAS[AG][WR]{[QG]|[NA]};[PA]A{I|L}SQ[WR]{[QG]|[NA]};[PA]{I|L}ASQ[WR]{[QG]|[NA]};[{I|L}P]AAG{[SA]|[TG]}[WR]{[QG]|[NA]};[{I|L}P][QT]Q[WR]{[QG]|[NA]};[{I|L}P]AQ{[SA]|[TG]}[WR]{[QG]|[NA]};[QP][QT]{I|L}[WR]{[QG]|[NA]};[QP][{I|L}T]Q[WR]{[QG]|[NA]};[PA]{I|L}AS[AG][WR]{[QG]|[NA]} 2.5217;1.6979;1.6228;1.6228;1.4985;1.3775;1.3363;1.2492;1.0909;0.79911 -;-;-;-;-;-;-;-;-;- 329 1 1.523 60618.9 1.0 3054 5189 8240 HBL1_DMSO_200M_050219_1,8245 HBL1_DMSO_200M_050219_1,8245,DQAELITVPQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8246 43.522 202.0 801430.0 25 0 52449.0 + 11100 GEERSWTI 8 144 489.2368235950414 0 489.2342407107353 PEAK CID FTMS 0 0 0 8240 435660.0625 0.2992103457150946 -4 0.2689323425292969 6 Unmodified _GEERSWTI_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 14.581692164780916 0.4900557725783909 3 PPP 3 -1 12.307 0.0 0.0 1.2604 0.0 0.0 113.91885687852864 568.3609102838499 682.2797671623786 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPP 1.2604 - 213 + 1 1.523 125210.4 1.0 3055 5189 8240 HBL1_DMSO_200M_050219_1,8246 HBL1_DMSO_200M_050219_1,8246,GEERSWTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8247 43.53 465.0 506110.0 25 0 40193.0 + -1 EMWCINRNWPQ 11 149 775.3365360844654 1548.6585192357306 2 775.8378173708916 MULTI CID FTMS 0 0 0 8240 430708.1875 0.0695108979702864 -4 0.2689323425292969 7 Carbamidomethyl (C),Oxidation (M) _EM(Oxidation (M))WC(Carbamidomethyl (C))INRNWPQ_ REV__ENST00000295974.12_1_4:41145057-41216499:-|nuORF;REV__ENST00000502682.1_1_4:41145057-41218531:-|nuORF;REV__ENST00000503555.5_1_4:41145057-41179590:-|nuORF 4.897010918128616 0.8520435188433833 3 [HD]EAQAGAQNA{M(Oxidation (M))|F}YQ 14 -1 + 130.51 0.0 0.0 8.4271 8.4271 65.069 0.0 0.0 0.0 1.6708517710415265 9.050244867691449 1.6708517710415265 0.0 0 1.6643943297944483 0.958607314841775 1.455112052208703 2.2416440611282624 [HD]EAQAGAQNA{M(Oxidation (M))|F}YQ;[HD]EQAAGAQNA{M(Oxidation (M))|F}YQ;[HD]EAQAGAGANA{M(Oxidation (M))|F}YQ;[HD]EQAAGAGANA{M(Oxidation (M))|F}YQ;[QA]HDEAGAQNA{M(Oxidation (M))|F}YQ;[QA]HDEAGAGANA{M(Oxidation (M))|F}YQ;[HD]EAQAGANQA{M(Oxidation (M))|F}YQ;[HD]EQAAGANQA{M(Oxidation (M))|F}YQ;[HD][QA]EAGAQNA{M(Oxidation (M))|F}YQ;[HD]EQAAQQNA{M(Oxidation (M))|F}YQ 8.4271;8.4271;8.3566;8.3566;8.3192;8.2487;8.0422;8.0422;8.024;7.9809 -;-;-;-;-;-;-;-;-;- 80050 1 1.523 163269.8 1.0 3056 5189 8240 HBL1_DMSO_200M_050219_1,8247 HBL1_DMSO_200M_050219_1,8247,EMWCINRNWPQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8248 43.54 529.0 373590.0 25 0 24021.0 -1 0 96 701.3274547765524 3501.6008915497614 5 701.5284301638603 MULTI CID FTMS 0 0 0 8240 316272.3125 0.6196210341847501 -1 0.0971336364746093 8 3 TP 2 -1 23.271 0.0 0.0 0.66459 0.0 0.0 3285.4939227246773 0.0 3285.4939227246773 0.0 15.823872065994562 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TP 0.66459 - 88 1 1.523 143371.8 1.0 3057 5189 8240 HBL1_DMSO_200M_050219_1,8248 HBL1_DMSO_200M_050219_1,8248, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8249 43.543 191.0 514880.0 25 0 50419.0 + 11400 GGPDQPEAL 9 123 442.2114380390925 882.408323144985 2 442.2110473513603 MULTI CID FTMS 0 0 0 8240 278806.78125 0.2313935248943769 3 -0.1777992248535156 9 Unmodified _GGPDQPEAL_ REV__ENST00000262888.7_1_19:44280762-44285041:-|nuORF 13.50788311687929 0.4710407108020397 3 [DP]ND 4 -1 42.967 0.0 0.0 4.8693 0.0 0.0 0.0 438.2344464595824 438.2344464595824 29.2514882883126 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.5387254899964358 0.6549471895720985 [DP]ND 4.8693 - 161 1 1.523 79465.2 1.0 3058 5189 8240 HBL1_DMSO_200M_050219_1,8249 HBL1_DMSO_200M_050219_1,8249,GGPDQPEAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8250 43.554 586.0 375150.0 25 0 26637.0 + 3781 DAHRSHPFI 9 204 540.2724112047138 1078.5302694762274 2 540.2709838747978 MULTI CID FTMS 0 0 0 8240 203525.171875 0.0824223971158563 -7 0.5677719116210938 10 Unmodified _DAHRSHPFI_ ENSG00000105669|ENST00000262812|COPE;ENST00000595984.5_1_19:19010490-19010792:-|nuORF;ENST00000598969.5_1_19:19010490-19016602:-|nuORF;nc|ENSG00000105669|O14579-2|COPE;nc|ENSG00000105669|O14579-3|COPE 42.312485326615175 0.0627620958981271 3 [HV]RSSHP{M(Oxidation (M))|F}{I|L} 9 3 + 61.797 0.0 0.0 5.7297 5.7297 89.23 0.0 0.0 0.0 10.698172374429332 33.20545915954034 10.698172374429332 15.922614709492535 0 1.6624379954164592 1.5228787452803376 0.3807196863200844 0.3494850021680094 [HV]RSSHP{M(Oxidation (M))|F}{I|L};[HA]DRSHP{M(Oxidation (M))|F}{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KG]SHP{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KA]{I|L}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{[QG]|[NA]}HP{M(Oxidation (M))|F}{I|L};[AG]TW[C(Carbamidomethyl (C))K]P{M(Oxidation (M))|F}{I|L};{I|L}YVHS[WK]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WP]ADP{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WP]WP{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QS]|[NT]}{I|L}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}{I|L} 5.7297;4.2534;3.5958;3.2366;3.0642;2.9784;2.9694;2.9385;2.896;2.7573 -;-;-;-;-;-;-;-;-;- 3218 1 1.523 172817.7 1.0 3059 5189 8240 HBL1_DMSO_200M_050219_1,8250 HBL1_DMSO_200M_050219_1,8250,DAHRSHPFI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8251 43.558 227.0 386780.0 25 0 24768.0 + 27158 PFSKTHCFL 9 109 360.5174059707423 1078.530388512427 3 360.8517028689384 MULTI CID FTMS 0 0 0 8240 149452.3125 0.1118238414542785 -6 0.4590873718261719 11 Unmodified _PFSKTHCFL_ REV__ENSG00000168792|ENST00000307201|ABHD15 15.847184025352805 0.4077185912009129 3 {[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ADP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 -1 + 17.624 0.0 0.0 1.6341 1.6341 70.934 0.0 0.0 0.0 0.0441619155993215 4.129304398447616 0.0441619155993215 3.3448298055711057 0 0.2887254899964357 0.9208187539523752 0.2887254899964357 0.0 {[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ADP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QD]|[EN]|[WG]|[KD]|[RS]}HHADP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QD]|[EN]|[WG]|[KD]|[RS]}[WH]HP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QD]|[EN]|[WG]|[KD]|[RS]}HHWP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[WR][{M(Oxidation (M))|F}V]DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}T]K[MD]DP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 1.6341;1.324;1.1949;1.1639;0.88479;0.53226;0.51585 -;-;-;-;-;-;- 169 1 1.523 77564.5 1.0 3060 5189 8240 HBL1_DMSO_200M_050219_1,8251 HBL1_DMSO_200M_050219_1,8251,PFSKTHCFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8252 43.571 739.0 295630.0 25 0 15803.0 + 2673 ATDPTIHTV 9 212 477.7481638411996 953.4817747491992 2 477.7484008669853 MULTI CID FTMS 0 0 0 8240 117521.0703125 0.0072360521508525 11 -0.7670326232910156 12 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 74.42276476219924 0.019389277360085 3 [TA]DP[{I|L}T]HTV 9 0 + 58.948 0.0 0.0 6.1823 6.1823 77.769 0.0 0.0 0.0 17.96109224580899 0.8715017571890087 0.8715017571890087 0.8715017571890087 0 0.6989700043360187 2.0 1.3040241051818162 0.0 + + [TA]DP[{I|L}T]HTV;[TA]DP[{I|L}T]HS{I|L};[TA]DP[{I|L}T]H{I|L}S;[TA]DP[{I|L}T]{[TV]|[{I|L}S]}H;[TA]DP[K{I|L}][Y{M(Oxidation (M))|F}];[DP]TKKPD[PG];[{I|L}A][NG][{I|L}T]PD[PG];[PS]EKKPD[PG];[TA]{[ET]|[MV]}[VP]HTV;[TA]{[ET]|[MV]}[VP]HS{I|L} 6.1823;6.0909;5.5275;4.5924;3.7613;3.5029;3.1552;3.1408;3.0881;2.9967 +;-;-;-;-;-;-;-;-;- + 1396 + 1 1.523 164660.6 1.0 3061 5189 8240 HBL1_DMSO_200M_050219_1,8252 HBL1_DMSO_200M_050219_1,8252,ATDPTIHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8254 43.575 1.9 30932000.0 25 0 4773500.0 + 16394 IYQSKVREL 9 55 379.2203914311493 1134.639344893648 3 379.2204467654228 MULTI CID FTMS 0 0 0 8253 26830628.0 0.7674083496192852 1 -0.0466079711914062 1 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 27.22323531849824 0.1848086127304535 3 {I|L}YQSKV 6 3 63.677 0.0 0.0 5.6121 0.0 0.0 0.0 413.21579919986567 413.21579919986567 58.1926720723289 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.5 + {I|L}YQSKV 5.6121 + + 72 + 1 1.506 50370.8 1.0 3062 5190 8253 HBL1_DMSO_200M_050219_1,8254 HBL1_DMSO_200M_050219_1,8254,IYQSKVREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8255 43.576 2.8 20644000.0 25 0 1413700.0 + 16390 IYQSKKQIQ 9 62 568.3269002633236 1134.6392475934472 2 568.3272582888603 MULTI CID FTMS 0 0 0 8253 22243582.0 0.9075862070091094 1 -0.0466079711914062 2 Unmodified _IYQSKKQIQ_ REV__ENSG00000173166|ENST00000319170|RAPH1;REV__nc|ENSG00000173166|Q70E73-2|RAPH1;REV__nc|ENSG00000173166|Q70E73-3|RAPH1;REV__nc|ENSG00000173166|Q70E73-4|RAPH1;REV__nc|ENSG00000173166|Q70E73-5|RAPH1;REV__nc|ENSG00000173166|Q70E73-6|RAPH1;REV__nc|ENSG00000173166|Q70E73-7|RAPH1;REV__nc|ENSG00000173166|Q70E73-8|RAPH1;REV__nc|ENSG00000173166|Q70E73-9|RAPH1 41.8396318013385 0.0653578398400075 3 {I|L}YQSKV 6 -1 83.008 0.0 0.0 7.3158 0.0 0.0 0.0 413.21711145572505 413.21711145572505 76.01850649356642 0.0 0.0 0.0 0 0.805462187404089 2.0 0.805462187404089 0.4247425010840047 {I|L}YQSKV 7.3158 - 80 + 1 1.506 50889.7 1.0 3063 5190 8253 HBL1_DMSO_200M_050219_1,8255 HBL1_DMSO_200M_050219_1,8255,IYQSKKQIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8256 43.577 3.6 11400000.0 25 0 841960.0 + 42733 VVDPNDPQM 9 67 507.7314825300917 1013.4484121269834 2 507.7320129275322 MULTI CID FTMS 0 0 0 8253 16934412.0 1.0 0 0.0 3 Unmodified _VVDPNDPQM_ ENSG00000151883|ENST00000281631|PARP8 28.486842064014134 0.1687311288560894 3 [DP]ND 4 5 28.302 0.0 0.0 2.7926 0.0 0.0 0.0 569.2751003443501 569.2751003443501 5.369704042775041 0.0 0.0 0.0 0 0.0 1.0 0.3252574989159953 0.7302046884880937 + [DP]ND 2.7926 + + 81 1 1.506 40004.8 1.0 3064 5190 8253 HBL1_DMSO_200M_050219_1,8256 HBL1_DMSO_200M_050219_1,8256,VVDPNDPQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8257 43.578 26.0 1986700.0 25 0 251610.0 + 5783 DPPPGSHVI 9 77 459.7369120917008 917.4592712502016 2 459.7375976443291 MULTI CID FTMS 0 0 0 8253 2035717.125 0.0811459983086122 20 -1.5666656494140625 4 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 26.88365393820708 0.1891292719743517 3 [DP]PPAP 6 5 42.625 0.0 0.0 4.6459 0.0 0.0 0.0 340.14869931100174 340.14869931100174 32.382287586051106 0.0 0.0 0.0 0 1.242992819099939 2.0 0.805462187404089 0.0 [DP]PPAP 4.6459 - 75 1 1.506 47673.8 1.0 3065 5190 8253 HBL1_DMSO_200M_050219_1,8257 HBL1_DMSO_200M_050219_1,8257,DPPPGSHVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8258 43.58 33.0 1505000.0 25 0 134100.0 + 3861 DAKLEPTNV 9 90 493.7611976080659 985.5078422829318 2 493.7601806521416 MULTI CID FTMS 0 0 0 8253 1728856.25 0.0433835696951635 -4 0.3033370971679687 5 Unmodified _DAKLEPTNV_ ENSG00000094804|ENST00000209728|CDC6 38.17557092003332 0.0854718145212029 3 [KG]E{I|L}EPTNV 9 3 [KG]E{I|L}E + + 29.869 19.437 3.4941 3.0309 3.0309 50.257 0.0 0.0 0.0 0.0 4.692037112058696 0.0 0.0 0 0.5 0.0 0.5 0.7887254899964358 [KG]E{I|L}EPTNV 3.0309 - 375 + 1 1.506 43667.6 1.0 3066 5190 8253 HBL1_DMSO_200M_050219_1,8258 HBL1_DMSO_200M_050219_1,8258,DAKLEPTNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8259 43.581 64.0 1475700.0 25 0 745440.0 3840 DAIWGIVV 8 77 436.7457173312477 871.4768817292954 2 436.7452270388603 MULTI CID FTMS 0 0 0 8253 721087.5625 1.0 0 0.0 6 Unmodified _DAIWGIVV_ ENSG00000167191|ENST00000300571|GPRC5B;nc|ENSG00000167191|Q9NZH0-2|GPRC5B 14.581692164780916 0.6954967302934248 3 {[DA]|[EG]}{I|L} 3 5 24.749 0.0 0.0 2.8399 0.0 0.0 0.0 569.3042492432204 569.3042492432204 2.6979531151190628 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}{I|L} 2.8399 + + 92 1 1.506 80845.1 1.0 3067 5190 8253 HBL1_DMSO_200M_050219_1,8259 HBL1_DMSO_200M_050219_1,8259,DAIWGIVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8260 43.583 83.0 909550.0 25 0 104910.0 + 16451 KAIGSLKEV 9 103 472.7922361376489 943.5699193420978 2 472.7924072146416 MULTI CID FTMS 0 0 0 8253 683814.875 0.6556756528058159 -1 0.0654220581054687 7 Unmodified _KAIGSLKEV_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 57.24910588100465 0.0276051374632116 3 GE{I|L}KAKEV 8 5 58.689 0.0 0.0 6.2198 0.0 0.0 71.0743656842789 0.0 71.0743656842789 0.0 43.47331642428614 0.0 0.0 0 1.2658715643802765 0.0 1.024227503252014 0.5 GE{I|L}KAKEV 6.2198 - 938 1 1.506 63456.7 1.0 3068 5190 8253 HBL1_DMSO_200M_050219_1,8260 HBL1_DMSO_200M_050219_1,8260,KAIGSLKEV True True KAIGSLKEV 43.58302 472.792407214642 5127353.0 8253.0 ENSG00000114346|ENST00000392692|ECT2;;nc|ENSG00000114346|Q9H8V3-3|ECT2;;nc|ENSG00000114346|Q9H8V3-4|ECT2;;nc|ENSG00000114346|Q9H8V3-2|ECT2 1.8701244592666624 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8261 43.588 252.0 1335300.0 25 0 65983.0 + 33174 SFADSSPGL 9 188 440.7064860013792 879.3984190695585 2 441.2081786990166 MULTI CID FTMS 0 0 0 8253 306334.125 0.5683162133541055 -2 0.1625556945800781 8 Unmodified _SFADSSPGL_ ENST00000556658.1_1_15:93609104-93609344:-|nuORF 34.10243960390752 0.1078313939113124 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGQYAA 8 7 + 36.52 0.0 0.0 4.1528 4.1528 70.466 0.0 0.0 0.0 1.034474678037128 1.034474678037128 1.034474678037128 0.5115252244738073 0 0.7302046884880937 2.0 0.3054621874040891 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGQYAA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGHGPAA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{M(Oxidation (M))|F}{[QS]|[NT]}Q;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[HN]PAA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ADKESP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGQ{M(Oxidation (M))|F}{[SA]|[TG]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGQA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HG[AG]YAA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{M(Oxidation (M))|F}[VP]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[HQ]PQ 4.1528;4.0947;4.0352;3.5901;3.5158;3.4682;3.41;3.0996;2.8544;2.8135 -;-;-;-;-;-;-;-;-;- 1972 1 1.506 255213.9 1.0 3069 5190 8253 HBL1_DMSO_200M_050219_1,8261 HBL1_DMSO_200M_050219_1,8261,SFADSSPGL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8262 43.597 505.0 403570.0 25 0 20692.0 -1 VMINKATPY 9 195 526.7768293788532 1051.5391058245064 2 526.7752563357353 MULTI CID FTMS 0 0 0 8253 278843.65625 0.5143476112542962 2 -0.1123771667480468 9 Oxidation (M) _VM(Oxidation (M))INKATPY_ ENSG00000170906|ENST00000485876|NDUFA3 32.30548876998284 0.1201446275138228 3 VVD[{I|L}T]{M(Oxidation (M))|F}VPY 9 -1 + 34.404 0.0 0.0 3.2718 3.2718 70.951 0.0 0.0 0.0 11.249839661946549 5.3915663740786925 5.3915663740786925 2.109369932725791 0 0.8371804965004639 1.6989700043360187 0.5451140161145328 0.0 VVD[{I|L}T]{M(Oxidation (M))|F}VPY;VVDPVYTPY;VVDP[YT]VPY;{[QN]|[E{I|L}]|[KN]}AT{I|L}{M(Oxidation (M))|F}VPY;VVD[{I|L}T]{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{I|L}V];VVD[{I|L}T]{M(Oxidation (M))|F}{I|L}[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}A{I|L}T{M(Oxidation (M))|F}VPY;VVDP[YT]{M(Oxidation (M))|F}[{I|L}V];VV[HM][HA]VPY;VVDP[YT]{I|L}[{M(Oxidation (M))|F}V] 3.2718;3.0712;3.0439;2.2019;2.0408;1.9487;1.8403;1.8129;1.7357;1.7208 -;-;-;-;-;-;-;-;-;- 2871 1 1.506 164718.7 1.0 3070 5190 8253 HBL1_DMSO_200M_050219_1,8262 HBL1_DMSO_200M_050219_1,8262,VMINKATPY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8263 43.607 574.0 210740.0 25 0 14807.0 -1 CKECRKCFYQ 10 132 739.8174912303406 1477.620429527481 2 739.8196899294853 MULTI CID FTMS 0 0 0 8253 253084.625 1.0 0 0.0 10 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKC(Carbamidomethyl (C))FYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 38.17557092003332 0.1768326257063233 3 {[QG]|[NA]}G[HS]NQQNA{M(Oxidation (M))|F}YQ 13 -1 + 97.859 0.0 0.0 6.6228 6.6228 79.838 0.0 0.0 0.0 1.2574267448456735 9.072459467631006 1.2574267448456735 1.2574267448456735 0 1.3807196863200843 0.721246399047171 1.4916440611282624 2.7302046884880937 {[QG]|[NA]}G[HS]NQQNA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QQNA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HS]GGQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HS]NQ[AG]NA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HS]N[AG]QNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HS]NQQGGA{M(Oxidation (M))|F}YQ;[TP][HM]NQQNA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QQGGA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K][AG]QNA{M(Oxidation (M))|F}YQ 6.6228;6.5377;6.2118;6.0088;6.0088;6.0088;6.0088;5.9734;5.9199;5.9199 -;-;-;-;-;-;-;-;-;- 3241 1 1.506 86384.8 1.0 3071 5190 8253 HBL1_DMSO_200M_050219_1,8263 HBL1_DMSO_200M_050219_1,8263,CKECRKCFYQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8264 43.617 610.0 303880.0 25 0 14272.0 + 22279 LPRSPPPTV 9 206 482.2843160095268 962.5540790858536 2 482.2838317751884 MULTI CID FTMS 0 0 0 8253 183119.703125 1.0 0 0.0 11 Unmodified _LPRSPPPTV_ ENSG00000139990|ENST00000341516|DCAF5;nc|ENSG00000139990|Q96JK2-2|DCAF5;nc|ENSG00000139990|Q96JK2-3|DCAF5 36.506200033944 0.094635877243972 3 [VG]P{[TV]|[{I|L}S]}PPPS{I|L} 10 5 + 39.976 0.0 0.0 4.1531 4.1531 70.563 0.0 0.0 0.0 7.355460596031733 12.009123853678346 7.355460596031733 0.5237875363565792 0 0.3658603893571175 1.6989700043360187 0.3054621874040891 0.0 [VG]P{[TV]|[{I|L}S]}PPPS{I|L};[VG]P{[TV]|[{I|L}S]}PPPTV;[RP]{[TV]|[{I|L}S]}PPPS{I|L};[RP]{[TV]|[{I|L}S]}PPPTV;{[TV]|[{I|L}S]}[RP]PPPS{I|L};{[TV]|[{I|L}S]}[RP]PPPTV;[PS][R{I|L}]PPPS{I|L};[TP][RV]PPPS{I|L};[PS][R{I|L}]PPPTV;[TP][RV]PPPTV 4.1531;4.0987;3.3272;3.2727;3.2716;3.2172;2.7529;2.7198;2.6985;2.6653 -;-;-;-;-;-;-;-;-;- 1120 1 1.506 143465.4 1.0 3072 5190 8253 HBL1_DMSO_200M_050219_1,8264 HBL1_DMSO_200M_050219_1,8264,LPRSPPPTV True False LPRSPPPTV 43.617337 482.283831775188 5787506.5 8253.0 ENSG00000139990|ENST00000341516|DCAF5;;nc|ENSG00000139990|Q96JK2-3|DCAF5;;nc|ENSG00000139990|Q96JK2-2|DCAF5 5.849585056304932 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8266 43.621 4.6 11016000.0 25 0 967020.0 + 3275 AYHGHGVSAF 10 82 523.2458478206078 1044.4771427080154 2 523.2462036013603 MULTI CID FTMS 0 0 0 8265 13152621.0 0.9695813378558668 -1 0.0466079711914062 1 Unmodified _AYHGHGVSAF_ ENST00000429772.6_1_12:48357436-48358078:+|nuORF;ENST00000550146.5_1_12:48357374-48358078:+|nuORF 53.57557251787612 0.059165173252085 3 [HV]YAS[HN]A{M(Oxidation (M))|F} 9 7 + 36.889 0.0 0.0 3.5318 3.5318 70.59 0.0 0.0 0.0 10.23387189888816 4.533248988790824 4.533248988790824 1.549471895720984 0 0.0 0.0 0.8807196863200843 0.0 [HV]YAS[HN]A{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV]S[HN]A{M(Oxidation (M))|F};[HV]S{M(Oxidation (M))|F}S[HN]A{M(Oxidation (M))|F};{[HG]|PP}[RH]SAYA{M(Oxidation (M))|F};{[WT]|[RM]}{[WT]|[RM]}AYA{M(Oxidation (M))|F};{[HG]|PP}[RH]S{M(Oxidation (M))|F}SA{M(Oxidation (M))|F};[HV]SVG[DP]{[MG]|[TS]}{M(Oxidation (M))|F};{[WT]|[RM]}{[WT]|[RM]}{M(Oxidation (M))|F}SA{M(Oxidation (M))|F};[HV]DK[DP]{[MG]|[TS]}{M(Oxidation (M))|F};{[HG]|PP}[HK]DAYA{M(Oxidation (M))|F} 3.5318;3.3835;3.3359;2.3514;2.188;2.1555;2.116;1.9921;1.7788;1.6064 -;-;-;-;-;-;-;-;-;- 172 + 1 1.506 42838.5 1.0 3073 5191 8265 HBL1_DMSO_200M_050219_1,8266 HBL1_DMSO_200M_050219_1,8266,AYHGHGVSAF True True AYHGHGVSAF 43.62149 523.24620360136 417288992.0 8265.0 ENST00000550146.5_1_12:48357374-48358078:+|nuORF;;ENST00000429772.6_1_12:48357436-48358078:+|nuORF 8.910357157389322 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8267 43.623 17.0 2339500.0 25 0 409190.0 -1 NTQGSDVCEP 10 65 553.724360109036 1105.4341672848718 2 553.7250244021416 MULTI CID FTMS 0 0 0 8265 3630526.75 0.907129251285944 -2 0.112030029296875 2 Carbamidomethyl (C) _NTQGSDVC(Carbamidomethyl (C))EP_ chr6:167112014-167136038|19|15.47|0.58|4.73|+|ENST00000400926|CCR6,CCR6;ENSG00000112486|ENST00000341935|CCR6 13.042465956692816 0.6287021003332052 3 YYGSQ{M(Oxidation (M))|F} 6 -1 55.406 0.0 0.0 5.0122 0.0 0.0 0.0 357.1462393886406 357.1462393886406 39.92152505736741 0.0 0.0 0.0 0 0.5 2.0 0.8494850021680094 0.0 YYGSQ{M(Oxidation (M))|F} 5.0122 - 162 1 1.506 35932.1 1.0 3074 5191 8265 HBL1_DMSO_200M_050219_1,8267 HBL1_DMSO_200M_050219_1,8267,NTQGSDVCEP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8268 43.624 22.0 3540100.0 25 0 546100.0 + 21989 LPPPGVRKI 9 68 326.2149630110197 975.6230596332592 3 326.2148010134697 MULTI CID FTMS 0 0 0 8265 2882973.75 1.0 0 0.0 3 Unmodified _LPPPGVRKI_ ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54566383-54570502:-|nuORF 20.453626601364224 0.2830276176381075 3 {I|L}PPPG 5 4 55.433 0.0 0.0 5.6818 0.0 0.0 0.0 511.3372286432249 511.3372286432249 44.463950151760656 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + {I|L}PPPG 5.6818 + + 43 + 1 1.506 69749.2 1.0 3075 5191 8265 HBL1_DMSO_200M_050219_1,8268 HBL1_DMSO_200M_050219_1,8268,LPPPGVRKI False True LPPPGVRKI 43.623847 326.21480101347 35492128.0 8265.0 ENSG00000067248|ENST00000251636|DHX29;;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;;ENST00000513447.1_1_5:54566383-54570502:-|nuORF 4.007898449897766 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8269 43.625 58.0 933390.0 25 0 106480.0 + 3872 DAKSTSIQV 9 93 474.7533024933875 947.492052053575 2 474.7536498904228 MULTI CID FTMS 0 0 0 8265 975616.6875 0.6237598421830198 2 -0.1123733520507812 4 Unmodified _DAKSTSIQV_ ENSG00000076242|ENST00000231790|MLH1;ENST00000435176.5_1_3:37035370-37045944:+|nuORF;ENST00000454028.5_1_3:37035144-37045944:+|nuORF;ENST00000458205.6_1_3:37035370-37038667:+|nuORF;ENST00000466900.5_1_3:37035370-37047454:+|nuORF;ENST00000539477.5_1_3:37035370-37053334:+|nuORF 56.17704186161178 0.0281986971544335 3 [AG]VSS{[MG]|[TS]}{I|L}QV 10 3 + 43.794 0.0 0.0 4.6221 4.6221 77.523 0.0 0.0 0.0 3.979400086720368 9.457640437841874 3.979400086720368 3.979400086720368 0 0.5440228147639203 1.6989700043360187 1.555462187404089 0.0 [AG]VSS{[MG]|[TS]}{I|L}QV;{[DA]|[EG]}KS{[MG]|[TS]}{I|L}QV;{[TV]|[{I|L}S]}NS{[MG]|[TS]}{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}SS{[MG]|[TS]}{I|L}QV;{[TV]|[{I|L}S]}GGS{[MG]|[TS]}{I|L}QV;[AG]{I|L}TR{[CT]|[{M(Oxidation (M))|F}G]}QV;[R{M(Oxidation (M))|F}]Q{I|L}{[SA]|[TG]}QV;[Q{I|L}]TR{[CT]|[{M(Oxidation (M))|F}G]}QV;{[SA]|[TG]}[VG]S{[MG]|[TS]}{I|L}QV;[R{M(Oxidation (M))|F}][AG]{I|L}{[SA]|[TG]}QV 4.6221;4.2021;3.9462;3.6503;2.9743;2.8787;2.8631;2.1555;1.9407;1.8856 -;+;-;-;-;-;-;-;-;- + 378 1 1.506 47089.8 1.0 3076 5191 8265 HBL1_DMSO_200M_050219_1,8269 HBL1_DMSO_200M_050219_1,8269,DAKSTSIQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8270 43.627 67.0 1009000.0 25 0 77607.0 + 3607 DAASYVRKV 9 100 504.77718045400906 1007.539807974818 2 504.7773010134697 MULTI CID FTMS 0 0 0 8265 919628.625 0.414279225687756 2 -0.1123733520507812 5 Unmodified _DAASYVRKV_ ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A 37.07464296494664 0.0915153923251136 3 {[DA]|[EG]}ASYVKRV 9 2 + 57.471 0.0 0.0 5.7041 5.7041 91.071 0.0 0.0 0.0 36.9230351167468 4.5127317126902255 4.5127317126902255 57.47112368768743 0 1.5 1.5228787452803376 0.0 0.0 {[DA]|[EG]}ASYVKRV 5.7041 - 146 + 1 1.506 57665.4 1.0 3077 5191 8265 HBL1_DMSO_200M_050219_1,8270 HBL1_DMSO_200M_050219_1,8270,DAASYVRKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8271 43.63 141.0 534780.0 25 0 58919.0 29894 QSAQYLRQ 8 112 497.25887405819856 992.5031951831972 2 497.2585937380791 MULTI CID FTMS 0 0 0 8265 572371.25 0.4813009316213946 2 -0.1123733520507812 6 Unmodified _QSAQYLRQ_ ENSG00000116698|ENST00000688051|SMG7;ENST00000367538.1_1_1:183441704-183485127:+|nuORF;nc|ENSG00000116698|Q92540-2|SMG7;nc|ENSG00000116698|Q92540-4|SMG7;nc|ENSG00000116698|Q92540|SMG7 50.855029805455786 0.1352255786796883 3 {[QS]|[NT]}A 3 5 49.958 0.0 0.0 5.0336 0.0 0.0 0.0 703.3525963885284 703.3525963885284 35.693415193665466 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.75 0.7396518287104438 + {[QS]|[NT]}A 5.0336 + + 338 1 1.506 61744.3 1.0 3078 5191 8265 HBL1_DMSO_200M_050219_1,8271 HBL1_DMSO_200M_050219_1,8271,QSAQYLRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8272 43.637 380.0 625860.0 25 0 34954.0 + -1 SFARGCQPCAF 11 154 650.7808589269749 1299.5471649207498 2 650.7811767458916 MULTI CID FTMS 0 0 0 8265 553829.9375 0.2356046401565507 -3 0.2091636657714843 7 2 Carbamidomethyl (C) _SFARGC(Carbamidomethyl (C))QPC(Carbamidomethyl (C))AF_ REV__ENSG00000083812|ENST00000196482|ZNF324 17.11289562659939 0.6791789249425932 3 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F} 11 -1 + 103.21 0.0 0.0 7.942 7.942 91.589 0.0 0.0 0.0 8.198635584046727 8.528259925575043 8.198635584046727 8.198635584046727 0 0.9247425010840048 0.6989700043360187 1.2689301784845295 1.9291746928241125 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F};[HS][PG]DEAQQNA{M(Oxidation (M))|F};[PG]SHDEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}MTEQNA{M(Oxidation (M))|F};[AG]NA{M(Oxidation (M))|F}MTEQNA{M(Oxidation (M))|F};[PS]GHDEAQQNA{M(Oxidation (M))|F} 7.942;7.3111;7.2396;7.2396;7.2396;7.1295;6.9746;6.9722;6.8187;6.6644 -;-;-;-;-;-;-;-;-;- 8755 1 1.506 175488.3 1.0 3079 5191 8265 HBL1_DMSO_200M_050219_1,8272 HBL1_DMSO_200M_050219_1,8272,SFARGCQPCAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8273 43.645 463.0 390890.0 25 0 28687.0 + 6809 EEAPSRPAL 9 165 485.25352147984665 968.4924900264932 2 485.2541076540947 MULTI CID FTMS 0 0 0 8265 384423.3125 0.0423539469633819 7 -0.4935722351074219 8 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 49.93300154707207 0.0405168250806675 3 EEAPSR{I|L}AP 9 2 + 51.612 0.0 0.0 5.3292 5.3292 83.448 0.0 0.0 0.0 34.49195256564128 2.364613562762642 2.364613562762642 7.289332277134612 0 0.6747425010840047 1.5228787452803376 0.3807196863200844 0.0 EEAPSR{I|L}AP;EEAPSR[PA]{I|L};[VS]{I|L}RSPA[HC];{[QN]|[E{I|L}]|[KN]}K[TA]PA[HC];{[QN]|[E{I|L}]|[KN]}KP[TA]A[HC];[QA]KKSPA[HC];{[QN]|[E{I|L}]|[KN]}KD[KP][HC];[AG]AKKSPA[HC];{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}V]SPA[HC];EE{I|L}{I|L}[YV]{[CT]|[{M(Oxidation (M))|F}G]} 5.3292;4.5765;3.7442;2.8463;1.9737;1.9268;1.862;1.5179;1.4651;1.0043 -;+;-;-;-;-;-;-;-;- + 876 + 1 1.506 139498.2 1.0 3080 5191 8265 HBL1_DMSO_200M_050219_1,8273 HBL1_DMSO_200M_050219_1,8273,EEAPSRPAL True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8274 43.654 510.0 304760.0 25 0 21663.0 + 13227 HHGSIKAWK 9 198 532.2935416111568 0 532.2926513552666 PEAK CID FTMS 0 0 0 8265 296081.0 1.0 0 0.0 9 Unmodified _HHGSIKAWK_ REV__ENSG00000243284|ENST00000368100|VSIG8 10.823927491677226 0.3028200641087142 3 KC[KP]D 5 -1 11.348 0.0 0.0 1.068 0.0 0.0 403.2229341971197 85.03025232486561 488.25318652198536 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.8556270500406937 0.0 KC[KP]D 1.068 - 206 + 1 1.506 122980.8 1.0 3081 5191 8265 HBL1_DMSO_200M_050219_1,8274 HBL1_DMSO_200M_050219_1,8274,HHGSIKAWK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8275 43.658 214.0 696920.0 25 0 49678.0 38889 TVLCVFDPT 9 165 332.16977057462714 0 332.1702148318291 PEAK CID FTMS 0 0 0 8265 261918.15625 1.0 0 0.0 10 Unmodified _TVLCVFDPT_ ENSG00000134780|ENST00000257215|DAGLA 15.248480904072842 0.2520662914010398 3 E 1 9 10.044 0.0 0.0 1.5165 0.0 0.0 462.2084548682012 68.05138574771718 530.2598406159184 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 E 1.5165 - 63 + 1 1.506 120208.5 1.0 3082 5191 8265 HBL1_DMSO_200M_050219_1,8275 HBL1_DMSO_200M_050219_1,8275,TVLCVFDPT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8276 43.661 143.0 860450.0 25 0 285630.0 + 45933 YYYDKNIIHK 10 98 452.9024166746748 1355.6854206242244 3 453.2382690310478 MULTI CID FTMS 0 0 0 8265 250246.203125 0.7194525842287994 -3 0.2091636657714843 11 Unmodified _YYYDKNIIHK_ ENSG00000134954|ENST00000392668|ETS1;ENSG00000157557|ENST00000360938|ETS2;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-4|ETS1;nc|ENSG00000134954|P14921|ETS1 41.34703777101937 0.1433426498679313 3 YYYDKN{I|L}{I|L}HK 10 0 + 80.916 0.0 0.0 5.9686 5.9686 84.378 0.0 0.0 0.0 36.53212513775344 6.064921830680703 6.064921830680703 6.064921830680703 0 0.3807196863200844 2.0 0.0 0.3054621874040891 + + YYYDKN{I|L}{I|L}HK;YYYDKN{I|L}{I|L}KH;YYYDKGG{I|L}{I|L}HK;YYYDKGG{I|L}{I|L}KH;YY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}AADN[{I|L}A]V;YY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[{M(Oxidation (M))|F}E]{I|L}HK;YY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}AARRCP;YY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}A{[ET]|[MV]}KQP;YY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[{M(Oxidation (M))|F}E]{I|L}KH;YY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}AWN[{I|L}A]V 5.9686;5.5212;5.2926;4.8452;4.7308;4.7003;4.4609;4.331;4.2529;4.2431 +;-;-;-;-;-;-;-;-;- + 510 + 1 1.506 100917.9 1.0 3083 5191 8265 HBL1_DMSO_200M_050219_1,8276 HBL1_DMSO_200M_050219_1,8276,YYYDKNIIHK False True YYYDKNIIHK 43.660659 453.238269031048 2482821.25 8265.0 nc|ENSG00000134954|P14921-4|ETS1;;nc|ENSG00000134954|P14921-2|ETS1;;ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;ENSG00000157557|ENST00000360938|ETS2 6.606027762095134 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8277 43.671 567.0 461900.0 25 0 70306.0 + 14065 IANATRPTI 9 185 478.77952701046144 955.5445010877228 2 478.7790710330009 MULTI CID FTMS 0 0 0 8265 251788.265625 0.1808715575199974 -2 0.112030029296875 12 Unmodified _IANATRPTI_ ENSG00000115760|ENST00000421745|BIRC6 70.33199760932243 0.0209706178985989 3 {I|L}ANATRPT{I|L} 9 0 + 92.834 0.0 0.0 9.7153 9.7153 87.361 0.0 0.0 0.0 77.26900219221923 5.7279219561216905 5.7279219561216905 2.872417111783477 0 1.1382104921644451 2.0 0.6307196863200843 0.9731975075880328 + + {I|L}ANATRPT{I|L};{I|L}ANATRTP{I|L};{I|L}AGGATRPT{I|L};{I|L}ANATRT{I|L}P;{I|L}AGGATRTP{I|L};{I|L}AGGATRT{I|L}P;[{I|L}A]NGRR[RN];{I|L}QQTRPT{I|L};{I|L}QQTRTP{I|L};[{I|L}A]GGGRR[RN] 9.7153;9.4147;8.7517;8.751;8.4511;7.7873;4.1516;3.7019;3.4013;2.7839 +;-;-;-;-;-;-;-;-;- + 2530 + 1 1.506 195342.8 1.0 3084 5191 8265 HBL1_DMSO_200M_050219_1,8277 HBL1_DMSO_200M_050219_1,8277,IANATRPTI True True IANATRPTI 43.670593 478.779071033001 8583153.0 8265.0 ENSG00000115760|ENST00000421745|BIRC6 5.295257568359375 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8278 43.683 721.0 293020.0 25 0 39570.0 + 17272 KLPKQPVIVKA 11 221 407.6077224815677 1219.801338044903 3 407.6074706912041 MULTI CID FTMS 0 0 0 8265 193928.90625 0.537540826241886 -2 0.112030029296875 13 Unmodified _KLPKQPVIVKA_ ENSG00000166441|ENST00000314138|RPL27A 60.94344597037026 0.0653162598225629 3 [K{I|L}]PKQPV{I|L}VKA 11 0 + 65.001 0.0 0.0 5.3288 5.3288 82.56 0.0 0.0 0.0 11.456939581989197 6.464449547664046 6.464449547664046 6.464449547664046 0 1.7104093769761874 0.4089353929735008 0.0 1.089136830878453 + + [K{I|L}]PKQPV{I|L}VKA;[K{I|L}]PKQPV{I|L}VAK;[K{I|L}]PK[AG]PV{I|L}VKA;[K{I|L}]PKQPV{I|L}KAV;[K{I|L}]PKQPV{I|L}KVA;[K{I|L}]PK[AG]PV{I|L}VAK;[K{I|L}]PKQPV{I|L}KG{I|L};[K{I|L}]PK[AG]PV{I|L}KAV;[K{I|L}]PK[AG]PV{I|L}KVA;[K{I|L}]PK[AG]PV{I|L}KG{I|L} 5.3288;4.7989;4.5805;4.2434;4.1236;4.0505;3.8406;3.4951;3.3753;3.0923 +;-;-;-;-;-;-;-;-;- + 1566 + 1 1.506 176764.5 1.0 3085 5191 8265 HBL1_DMSO_200M_050219_1,8278 HBL1_DMSO_200M_050219_1,8278,KLPKQPVIVKA True True KLPKQPVIVKA 43.683101 407.607470691204 3285657.0 8265.0 ENSG00000166441|ENST00000314138|RPL27A 7.242610136667888 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8280 43.687 2.7 17925000.0 25 0 1916800.0 + 44550 YPESVGREV 9 56 518.2585837006741 1034.502614468148 2 518.2590820193291 MULTI CID FTMS 0 0 0 8279 21311424.0 0.8919196226113763 1 -0.0466041564941406 1 Unmodified _YPESVGREV_ ENSG00000170471|ENST00000262879|RALGAPB;nc|ENSG00000170471|Q86X10-3|RALGAPB;nc|ENSG00000170471|Q86X10-4|RALGAPB 26.268140514670165 0.1969607489560049 3 YPESV 5 4 65.49 0.0 0.0 6.3305 0.0 0.0 0.0 456.22275720767817 456.22275720767817 38.042359562158126 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.8494850021680094 0.0 + YPESV 6.3305 + + 34 + 1 1.497 45366.5 1.0 3086 5192 8279 HBL1_DMSO_200M_050219_1,8280 HBL1_DMSO_200M_050219_1,8280,YPESVGREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8281 43.688 4.3 9153400.0 25 0 642460.0 + 12048 GQDVGRYQV 9 65 511.2564897483176 1020.4984265634351 2 511.2569457888603 MULTI CID FTMS 0 0 0 8279 12250592.0 0.7542782441694339 1 -0.0466041564941406 2 Unmodified _GQDVGRYQV_ ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF 34.40172386719151 0.1061884637610825 3 {[QG]|[NA]}DVV 5 4 31.466 0.0 0.0 3.0834 0.0 0.0 0.0 519.2360933893186 519.2360933893186 18.109511252515027 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {[QG]|[NA]}DVV 3.0834 - 181 + 1 1.497 39341.2 1.0 3087 5192 8279 HBL1_DMSO_200M_050219_1,8281 HBL1_DMSO_200M_050219_1,8281,GQDVGRYQV True True GQDVGRYQV 43.688438 511.25694578886 169755984.0 8279.0 ENST00000485612.5_1_X:153061851-153063885:+|nuORF;;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;;ENSG00000180879|ENST00000370086|SSR4 6.076725959777832 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8282 43.69 69.0 1044900.0 25 0 88350.0 + 14432 IFQEPTEPK 9 88 544.7845789551706 1087.554604977141 2 544.7847778201103 MULTI CID FTMS 0 0 0 8279 1032266.75 0.1537488339630392 -4 0.274932861328125 3 Unmodified _IFQEPTEPK_ ENSG00000171848|ENST00000304567|RRM2;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 47.74868867922204 0.0453060283459952 3 {I|L}{M(Oxidation (M))|F}QE 4 5 62.295 0.0 0.0 5.728 0.0 0.0 0.0 567.2792000582285 567.2792000582285 46.32113673878116 0.0 0.0 0.0 0 0.805462187404089 1.0 0.805462187404089 0.4247425010840047 + {I|L}{M(Oxidation (M))|F}QE 5.728 + + 286 + 1 1.497 58821.6 1.0 3088 5192 8279 HBL1_DMSO_200M_050219_1,8282 HBL1_DMSO_200M_050219_1,8282,IFQEPTEPK True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8283 43.691 36.0 1280100.0 25 0 105610.0 + 42452 DAVTAREAI 9 82 473.2537934003117 944.4930338674234 2 473.2539245486259 MULTI CID FTMS 0 0 0 8279 933280.3125 0.9770200338870736 -2 0.1123771667480468 4 Unmodified _VTGEQIWL_ ENSG00000132128|ENST00000617190|LRRC41;ENST00000472710.2_1_1:46744539-46744996:-|nuORF 19.438996006549623 0.6237395211498085 3 {[DA]|[EG]}VWV[{M(Oxidation (M))|F}V]G 8 8 42.625 0.0 0.0 4.513 0.0 0.0 0.0 68.05140863590077 68.05140863590077 30.406075122407685 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 {[DA]|[EG]}VWV[{M(Oxidation (M))|F}V]G 4.513 - 201 + 1 1.497 41298.5 1.0 3089 5192 8279 HBL1_DMSO_200M_050219_1,8283 HBL1_DMSO_200M_050219_1,8283,VTGEQIWL False False DAVTAREAI 43.691267 473.253924548626 5682770.0 8279.0 ENSG00000132128|ENST00000617190|LRRC41;;ENST00000472710.2_1_1:46744539-46744996:-|nuORF 3.082711696624756 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8284 43.692 38.0 2236900.0 25 0 340480.0 15178 IPDKKVALW 9 96 357.21692630247696 1068.628949507631 3 357.2160522341728 MULTI CID FTMS 0 0 0 8279 894230.4375 0.0719597796586396 -7 0.4467315673828125 5 Unmodified _IPDKKVALW_ ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-3|WDR44 16.149105407346934 0.3995459350917656 3 QKS{I|L}HQV 7 8 21.2 0.0 0.0 1.9838 0.0 0.0 230.1632578083898 0.0 230.1632578083898 0.0 1.7360238657677556 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.4247425010840047 QKS{I|L}HQV 1.9838 - 122 + 1 1.497 74538.1 1.0 3090 5192 8279 HBL1_DMSO_200M_050219_1,8284 HBL1_DMSO_200M_050219_1,8284,IPDKKVALW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8285 43.695 139.0 611920.0 25 0 61825.0 + 43012 VVYGGKSTI 9 101 462.2633370071416 922.5121210810833 2 462.2641784548759 MULTI CID FTMS 0 0 0 8279 442255.46875 0.0086861862170774 15 -1.1835403442382812 6 Unmodified _VVYGGKSTI_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54631532-54634860:+|nuORF 17.11289562659939 0.3734572693229295 3 VVYRYGGG 8 6 49.831 0.0 0.0 5.4016 0.0 0.0 0.0 68.0514162652953 68.0514162652953 30.452839368710567 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VVYRYGGG 5.4016 - 364 + 1 1.497 69742.5 1.0 3091 5192 8279 HBL1_DMSO_200M_050219_1,8285 HBL1_DMSO_200M_050219_1,8285,VVYGGKSTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8286 43.698 162.0 825040.0 25 0 163160.0 + 40297 GVPDEMRKV 9 115 344.1835833525155 1029.5289206577463 3 344.1836425662041 MULTI CID FTMS 0 0 0 8279 376172.1875 0.8207636985944106 -3 0.1777992248535156 7 Unmodified _VGVPPGTWAF_ ENST00000509383.5_1_6:97679279-97717985:-|nuORF;ENSG00000146263|ENST00000683635|MMS22L 14.838274106304384 0.5985701837916485 3 [VG]PDE 5 7 46.026 0.0 0.0 4.4706 0.0 0.0 0.0 529.2939547174436 529.2939547174436 29.11445925863681 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [VG]PDE 4.4706 - 67 + 1 1.497 113537.5 1.0 3092 5192 8279 HBL1_DMSO_200M_050219_1,8286 HBL1_DMSO_200M_050219_1,8286,VGVPPGTWAF False False GVPDEMRKV 43.698444 344.183642566204 3955902.25 8279.0 ENST00000509383.5_1_6:97679279-97717985:-|nuORF;;ENSG00000146263|ENST00000683635|MMS22L 1.7797969977060957 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8287 43.705 335.0 712980.0 25 0 54753.0 + 41880 VPYTPRRL 8 210 334.53467867945585 1000.5822066385676 3 334.5344726443291 MULTI CID FTMS 0 0 0 8279 355838.09375 0.995163239254959 -1 0.0657691955566406 8 Unmodified _VPYTPRRL_ ENSG00000176473|ENST00000402312|WDR25 21.74664581756881 0.5868176546531598 3 VP{I|L} 3 5 26.278 0.0 0.0 2.6263 0.0 0.0 0.0 688.3538149781464 688.3538149781464 17.554859331108474 0.0 0.0 0.0 0 0.1223637474483469 0.3372421683184259 0.0 0.0 VP{I|L} 2.6263 - 133 + 1 1.497 189953.2 1.0 3093 5192 8279 HBL1_DMSO_200M_050219_1,8287 HBL1_DMSO_200M_050219_1,8287,VPYTPRRL False False VPYTPRRL 43.70453 334.534472644329 3213571.5 8279.0 ENSG00000176473|ENST00000402312|WDR25 3.718811670939128 3.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8288 43.714 518.0 192310.0 25 0 13053.0 + -1 PSFHLCSNVL 10 117 587.2908019568677 1172.5670509805352 2 587.2903930544853 MULTI CID FTMS 0 0 0 8279 276100.0 0.955716651733594 -2 0.1123771667480468 9 Carbamidomethyl (C) _PSFHLC(Carbamidomethyl (C))SNVL_ REV__ENST00000257724.7_1_7:114658065-114658206:+|nuORF 29.081581746732265 0.3152867722954398 3 {[QD]|[EN]|[WG]|[KD]|[RS]}DPSQSANV{I|L} 11 -1 + 87.803 0.0 0.0 7.4881 7.4881 90.932 0.0 0.0 0.0 5.963341820619206 61.45786919631408 5.963341820619206 8.675555487425484 0 0.8494850021680094 0.0 2.004432191740108 1.5044321917401078 {[QD]|[EN]|[WG]|[KD]|[RS]}DPSQSANV{I|L};{[QG]|[NA]}S[QA]AQSANV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DPSQSAGGV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DPS[AG]SANV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DPG{[SA]|[TG]}SANV{I|L};{[QG]|[NA]}SV[NG]QSANV{I|L};{[NV]|[RG]}EEAQSANV{I|L};[WP]{[MG]|[TS]}AQSANV{I|L};[TP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}AQSANV{I|L};{[SA]|[TG]}N[QA]AQSANV{I|L} 7.4881;6.7482;6.7096;6.7096;6.559;6.4915;6.3345;6.3345;6.3018;6.2348 -;-;-;-;-;-;-;-;-;- 1941 1 1.497 81285.0 1.0 3094 5192 8279 HBL1_DMSO_200M_050219_1,8288 HBL1_DMSO_200M_050219_1,8288,PSFHLCSNVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8289 43.726 727.0 372930.0 25 0 23890.0 + 30331 RAFGGKDIKV 10 254 364.2168649973388 1089.6287655922165 3 364.2171813845634 MULTI CID FTMS 0 0 0 8279 239803.09375 1.0 0 0.0 10 Unmodified _RAFGGKDIKV_ ENSG00000165934|ENST00000298875|CPSF2 38.558800761779466 0.1727858048679977 3 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}GGKD{I|L}KV 10 0 + 64.155 0.0 0.0 5.8878 5.8878 82.566 0.0 0.0 0.0 4.598802500797845 8.453873981209668 4.598802500797845 4.598802500797845 0 1.174742501084005 0.0 0.4247425010840047 0.4337955442476158 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}GGKD{I|L}KV;{[TV]|[{I|L}S]}[KC]GKD{I|L}KV;[K{I|L}][CS]GKD{I|L}KV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}NKD{I|L}KV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}GGKDVK{I|L};{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))K]KD{I|L}KV;[K{I|L}][C(Carbamidomethyl (C))S]KD{I|L}KV;{[TV]|[{I|L}S]}[KC]GKDVK{I|L};[K{I|L}][CS]GKDVK{I|L};[KG][{M(Oxidation (M))|F}V]GKD{I|L}KV 5.8878;5.4658;5.3316;5.2883;5.112;4.8663;4.7322;4.6899;4.5558;4.5534 +;-;-;-;-;-;-;-;-;- + 1507 1 1.497 219176.6 1.0 3095 5192 8279 HBL1_DMSO_200M_050219_1,8289 HBL1_DMSO_200M_050219_1,8289,RAFGGKDIKV False True RAFGGKDIKV 43.726257 364.217181384563 1170068.625 8279.0 ENSG00000165934|ENST00000298875|CPSF2 5.282454490661621 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8290 43.73 176.0 693320.0 25 0 116800.0 + 32628 SAYGTATRI 9 103 470.2479664947065 938.4813800562132 2 470.2551757693291 MULTI CID FTMS 0 0 0 -1 0 11 Unmodified _SAYGTATRI_ ENSG00000198730|ENST00000361367|CTR9 36.506200033944 0.094635877243972 3 {[SA]|[TG]}YGTA 6 3 52.484 0.0 0.0 5.5925 0.0 0.0 0.0 385.2202547662719 385.2202547662719 40.89062518744797 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.8807196863200843 0.0 + {[SA]|[TG]}YGTA 5.5925 + + 121 + 1 1.497 98829.5 1.0 3096 5192 8279 HBL1_DMSO_200M_050219_1,8290 HBL1_DMSO_200M_050219_1,8290,SAYGTATRI True True SAYGTATRI 43.729677 470.255175769329 5573971.5 8279.0 ENSG00000198730|ENST00000361367|CTR9 0.967626134554545 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8292 43.734 127.0 432290.0 25 0 25208.0 + 12215 GQTPVFSKA 9 107 467.7532186533596 933.4918843735192 2 467.7533447146416 MULTI CID FTMS 0 0 0 8291 444039.9375 0.6172363382932813 1 -0.0158348083496093 1 Unmodified _GQTPVFSKA_ ENSG00000142676|ENST00000643754|RPL11;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;nc|ENSG00000142676|P62913-2|RPL11 18.373094154950223 0.3393451798331396 3 {[QG]|[NA]}T 3 6 19.507 0.0 0.0 2.0897 0.0 0.0 0.0 644.3411940261161 644.3411940261161 6.012196779647642 0.0 0.0 0.0 0 0.5 0.0 0.0 0.7059771852360797 + {[QG]|[NA]}T 2.0897 + + 221 1 1.497 48212.6 1.0 3097 5193 8291 HBL1_DMSO_200M_050219_1,8292 HBL1_DMSO_200M_050219_1,8292,GQTPVFSKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8293 43.746 648.0 121000.0 25 0 7296.9 + 20794 LLVVYPWTQR 10 113 637.8642704325744 1273.7139879319486 2 637.8666869997978 MULTI CID FTMS 0 0 0 8291 109736.1796875 0.6943436099045405 1 -0.0158348083496093 2 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 24.99096001346401 0.4071966087057876 3 {I|L}{I|L}VVY 5 5 47.703 0.0 0.0 3.7452 0.0 0.0 0.0 683.3277540985624 683.3277540985624 21.760912590556813 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 + {I|L}{I|L}VVY 3.7452 + + 88 + 1 1.497 62549.4 1.0 3098 5193 8291 HBL1_DMSO_200M_050219_1,8293 HBL1_DMSO_200M_050219_1,8293,LLVVYPWTQR False True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8295 43.75 44.0 1290200.0 25 0 163150.0 + -1 MPEWVVCAM 9 79 561.7401901671267 1121.4658274010533 2 561.7410156130791 MULTI CID FTMS 0 0 0 8294 1066351.5 0.7869372366132855 -1 0.0158348083496093 1 Carbamidomethyl (C) _MPEWVVC(Carbamidomethyl (C))AM_ REV__ENSG00000032389|ENST00000382125|EIPR1 23.1484247019978 0.2366544122328345 3 MPEPA 5 -1 59.213 0.0 0.0 5.28 0.0 0.0 0.0 593.2192476861936 593.2192476861936 56.73902187720806 0.0 0.0 0.0 0 0.7614393726401688 1.2218487496163564 0.3807196863200844 0.0 MPEPA 5.28 - 82 + 1 1.497 49940.9 1.0 3099 5194 8294 HBL1_DMSO_200M_050219_1,8295 HBL1_DMSO_200M_050219_1,8295,MPEWVVCAM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8296 43.751 51.0 1327200.0 25 0 87062.0 + 22227 LPRELSKQV 9 94 535.3210156634233 1068.6274783936465 2 535.3218871951103 MULTI CID FTMS 0 0 0 8294 844230.6875 0.1216216535002302 -5 0.2402381896972656 2 Unmodified _LPRELSKQV_ ENSG00000123975|ENST00000314355|CKS2 22.65808497894818 0.2428932432760099 3 {I|L}SKQV 5 4 41.661 0.0 0.0 3.8985 0.0 0.0 495.2837391584 0.0 495.2837391584 0.0 14.666152729074462 0.0 0.0 0 0.4978499570595206 0.0 0.3494850021680094 0.0 + {I|L}SKQV 3.8985 + + 203 1 1.497 56114.1 1.0 3100 5194 8294 HBL1_DMSO_200M_050219_1,8296 HBL1_DMSO_200M_050219_1,8296,LPRELSKQV False True LPRELSKQV 43.75104 535.32188719511 47849992.0 8294.0 chr9:89311345-89315170|10|74.8|0.14|9.01|+|1|None,CKS2|1;;ENSG00000123975|ENST00000314355|CKS2 -0.4428292314211527 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8297 43.761 573.0 473190.0 25 0 50635.0 42877 VVMAFEEV 8 184 462.232253860878 922.449954788556 2 462.2329894900322 MULTI CID FTMS 0 0 0 8294 291448.125 0.7076086476548477 -1 0.0158348083496093 3 Unmodified _VVMAFEEV_ ENSG00000103723|ENST00000535359|AP3B2;ENSG00000132842|ENST00000255194|AP3B1;nc|ENSG00000103723|Q13367-3|AP3B2;nc|ENSG00000103723|Q13367|AP3B2;nc|ENSG00000132842|O00203-3|AP3B1 20.871210003555333 0.6025813472596342 3 VV{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T[DP]V 8 4 + 37.157 0.0 0.0 4.0281 4.0281 76.137 0.0 0.0 0.0 3.440899702813028 13.288493772929044 3.440899702813028 4.332915403070331 0 0.6989700043360187 2.0 0.3054621874040891 0.0 VV{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T[DP]V;[PS]N[H{I|L}]DAAV;[KG]GSY[NG]AAV;{[QN]|[E{I|L}]|[KN]}SY[NG]AAV;[KG]GYS[NG]AAV;{[QN]|[E{I|L}]|[KN]}YS[NG]AAV;AA[YR]ADSAV;[KG]GY{[QN]|[E{I|L}]|[KN]}SAV;{[QN]|[E{I|L}]|[KN]}Y{[QN]|[E{I|L}]|[KN]}SAV;[{I|L}P]H{[QG]|[NA]}DSAV 4.0281;3.5584;3.521;3.4866;3.4346;3.4002;3.3193;3.2437;3.2152;3.1912 -;-;-;-;-;-;-;-;-;- 2190 1 1.497 208651.1 1.0 3101 5194 8294 HBL1_DMSO_200M_050219_1,8297 HBL1_DMSO_200M_050219_1,8297,VVMAFEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8298 43.774 753.0 345620.0 25 0 29651.0 + 28041 PPAAGPKD 8 241 376.700475681202 751.386398429204 2 376.7002136111259 MULTI CID FTMS 0 0 0 8294 231557.421875 0.6793029099187917 -2 0.06243896484375 4 Unmodified _PPAAGPKD_ REV__ENSG00000184634|ENST00000374080|MED12;REV__nc|ENSG00000184634|Q93074-2|MED12;REV__nc|ENSG00000184634|Q93074-3|MED12 7.910154910731844 0.7763180056447161 3 [RV]YS{I|L}D 6 -1 + 42.457 0.0 0.0 5.6505 5.6505 90.202 0.0 0.0 0.0 7.803943707888763 19.692737604564023 7.803943707888763 32.20480764961262 0 0.7302046884880937 0.0 0.805462187404089 0.4247425010840047 [RV]YS{I|L}D;Y{I|L}[KT]MP;Y{I|L}[KT]PM;Y{I|L}G{[WT]|[RM]}{I|L};HH[RV]G{M(Oxidation (M))|F} 5.6505;1.3645;1.3036;1.1452;0.4665 -;-;-;-;- 245 1 1.497 197270.5 1.0 3102 5194 8294 HBL1_DMSO_200M_050219_1,8298 HBL1_DMSO_200M_050219_1,8298,PPAAGPKD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8299 43.788 800.0 588140.0 25 0 43568.0 -1 CLGTVTDAK 9 353 322.16475078743724 0 322.1654235720634 PEAK CID FTMS 0 0 0 8294 172736.671875 0.8395514371630874 2 -0.1670494079589843 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))LGTVTDAK_ ENST00000585421.5_1_17:76851311-76851587:-|nuORF 7.608950283845883 0.3396988645791728 3 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.85387 0.0 0.0 112.0649994442484 380.1577852838501 492.2227847280984 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.85387 - 14 + 1 1.497 368913.1 0.8399999737739563 3103 5194 8294 HBL1_DMSO_200M_050219_1,8299 HBL1_DMSO_200M_050219_1,8299,CLGTVTDAK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8300 43.8 717.0 305490.0 25 0 15733.0 11151 GEKLVFCPA 9 201 482.2517950643245 962.4890371954492 2 482.2522155642509 MULTI CID FTMS 0 0 0 8294 139743.375 0.2940771488000301 -5 0.2402381896972656 6 Unmodified _GEKLVFCPA_ ENST00000405592.5_1_2:42981215-42981368:+|nuORF 16.942295170755138 0.3780752226737986 3 [YV]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NTG 8 7 31.954 0.0 0.0 3.3199 0.0 0.0 0.0 68.05138574771718 68.05138574771718 13.229885381891986 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.1203715150305281 0.2742275032520141 [YV]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NTG 3.3199 - 817 + 1 1.497 164719.6 1.0 3104 5194 8294 HBL1_DMSO_200M_050219_1,8300 HBL1_DMSO_200M_050219_1,8300,GEKLVFCPA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8301 43.812 656.0 233770.0 25 0 40466.0 -1 QESCSMRCG 9 149 565.7033767190087 1129.3922005048173 2 565.7021972537041 MULTI CID FTMS 0 0 0 8294 146636.875 0.7200676673753204 2 -0.1670494079589843 7 2 Carbamidomethyl (C),Oxidation (M) _QESC(Carbamidomethyl (C))SM(Oxidation (M))RC(Carbamidomethyl (C))G_ ENSG00000099994|ENST00000358321|SUSD2;ENST00000463101.1_1_22:24578870-24579667:+|nuORF 10.823927491677226 0.5436922275383211 3 YY[Y{M(Oxidation (M))|F}]D 5 -1 22.9 0.0 0.0 2.0276 0.0 0.0 0.0 375.0948870523555 375.0948870523555 8.920365321768529 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.5 0.0 YY[Y{M(Oxidation (M))|F}]D 2.0276 - 299 + 1 1.497 117805.5 1.0 3105 5194 8294 HBL1_DMSO_200M_050219_1,8301 HBL1_DMSO_200M_050219_1,8301,QESCSMRCG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8302 43.824 677.0 306370.0 25 0 13859.0 + 32284 RWPKKSAEF 9 172 574.8139164908926 1147.613280048585 2 574.8144409060478 MULTI CID FTMS 0 0 0 8294 132388.828125 0.238682337301116 14 -1.1850471496582031 8 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 17.44264345198275 0.3645313841742926 3 {[CP]|[EA]}{I|L}SGV{I|L}{I|L}A{M(Oxidation (M))|F}E 11 10 + 53.303 0.0 0.0 4.6447 4.6447 71.633 0.0 0.0 0.0 14.501288491866362 20.93402504483067 14.501288491866362 0.3457567454156915 0 0.0 0.3467874862246563 2.2447026752325154 0.0 {[CP]|[EA]}{I|L}SGV{I|L}{I|L}A{M(Oxidation (M))|F}E;{[CP]|[EA]}{I|L}SGV{I|L}{I|L}AE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}SR{I|L}{I|L}A{M(Oxidation (M))|F}E;{[CP]|[EA]}{I|L}SR{I|L}{I|L}AE{M(Oxidation (M))|F};{[CP]|[EA]}S{I|L}GV{I|L}{I|L}A{M(Oxidation (M))|F}E;{[CP]|[EA]}S{I|L}GV{I|L}{I|L}AE{M(Oxidation (M))|F};{[CP]|[EA]}S{I|L}R{I|L}{I|L}A{M(Oxidation (M))|F}E;{[CP]|[EA]}S{I|L}R{I|L}{I|L}AE{M(Oxidation (M))|F};{[TV]|[{I|L}S]}GV{[CP]|[EA]}{I|L}{I|L}A{M(Oxidation (M))|F}E;{M(Oxidation (M))|F}{M(Oxidation (M))|F}ASKK[HK]GV 4.6447;4.6145;4.204;4.1739;3.4055;3.3753;2.9648;2.9347;2.7835;2.7687 -;-;-;-;-;-;-;-;-;- 1157 1 1.497 158064.5 1.0 3106 5194 8294 HBL1_DMSO_200M_050219_1,8302 HBL1_DMSO_200M_050219_1,8302,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8303 43.838 722.0 166490.0 25 0 3741.9 + 29813 QQIEPVNGQVT 11 146 606.8143883760365 0 606.8146240115166 PEAK CID FTMS 0 0 0 8294 121413.5390625 0.4221217695499094 -1 0.0158348083496093 9 Unmodified _QQIEPVNGQVT_ ENSG00000123136|ENST00000242776|DDX39A;ENST00000586558.5_1_19:14522263-14523533:-|nuORF;ENST00000589318.5_1_19:14520811-14524032:-|nuORF;ENST00000590260.5_1_19:14522263-14530155:-|nuORF;nc|ENSG00000123136|O00148-2|DDX39A;nc|ENSG00000123136|O00148-3|DDX39A 107.5634045930896 1.7612937302470682e-14 3 QGNVPE{I|L}A 8 9 60.456 0.0 0.0 4.9897 0.0 0.0 218.1273990929644 182.05715356998283 400.1845526629472 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 1.9802046884880933 0.8494850021680094 QGNVPE{I|L}A 4.9897 - 830 + 1 1.497 88703.5 1.0 3107 5194 8294 HBL1_DMSO_200M_050219_1,8303 HBL1_DMSO_200M_050219_1,8303,QQIEPVNGQVT True True QQIEPVNGQVT 43.837587 606.814624011517 1673472.75 8294.0 ENST00000586558.5_1_19:14522263-14523533:-|nuORF;;nc|ENSG00000123136|O00148-2|DDX39A;;nc|ENSG00000123136|O00148-3|DDX39A;;ENST00000589318.5_1_19:14520811-14524032:-|nuORF;;ENSG00000123136|ENST00000242776|DDX39A;;ENST00000590260.5_1_19:14522263-14530155:-|nuORF 6.220684846242269 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8304 43.851 761.0 57687.0 25 0 3407.7 -1 LDCHYSGHHPQ 11 93 675.7880155838826 1349.5614782345651 2 675.7903320193291 MULTI CID FTMS 0 0 0 8294 137251.9375 0.3394620097753167 4 -0.3653640747070312 10 Carbamidomethyl (C) _LDC(Carbamidomethyl (C))HYSGHHPQ_ ENSG00000163635|ENST00000674280|ATXN7;ENST00000474112.5_1_3:63898274-63982174:+|nuORF;ENST00000484668.1_1_3:63973932-63976536:+|nuORF;nc|ENSG00000163635|O15265-2|ATXN7;nc|ENSG00000163635|O15265-3|ATXN7 12.240655878213236 0.7805268987462184 3 YQ 2 -1 21.594 0.0 0.0 1.6001 0.0 0.0 1040.4287396171942 0.0 1040.4287396171942 0.0 10.756338376653243 0.0 0.0 0 0.5 0.0 0.0 0.2614393726401688 YQ 1.6001 - 150 + 1 1.497 37665.2 1.0 3108 5194 8294 HBL1_DMSO_200M_050219_1,8304 HBL1_DMSO_200M_050219_1,8304,LDCHYSGHHPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8306 43.855 1.5 25296000.0 25 0 2132400.0 + 3862 DAKLEPTNV 9 72 493.7611976080659 985.5078422829318 2 493.7616454958916 MULTI CID FTMS 0 0 0 8305 34078592.0 0.8551613074511215 1 -0.0617561340332031 1 Unmodified _DAKLEPTNV_ ENSG00000094804|ENST00000209728|CDC6 65.23502041540118 0.0231836506122253 3 {[DA]|[EG]}K{I|L}E 5 4 37.536 0.0 0.0 3.8088 0.0 0.0 0.0 426.1991045575962 426.1991045575962 17.090606190045108 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 1.1861818737241734 0.0 + {[DA]|[EG]}K{I|L}E 3.8088 + + 187 1 1.494 37150.9 1.0 3109 5195 8305 HBL1_DMSO_200M_050219_1,8306 HBL1_DMSO_200M_050219_1,8306,DAKLEPTNV True True DAKLEPTNV 43.854989 493.761645495892 222888256.0 8305.0 ENSG00000094804|ENST00000209728|CDC6 8.704214096069336 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8307 43.856 8.5 4202300.0 25 0 699310.0 + 45778 YYKPDSPEY 9 56 581.2584478872894 1160.5023428413788 2 581.2588378787041 MULTI CID FTMS 0 0 0 8305 5533741.0 0.5161243236976601 1 -0.0617561340332031 2 Unmodified _YYKPDSPEY_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 41.8396318013385 0.0653578398400075 3 [EP]S[DP]KYYY 9 6 + 46.132 0.0 0.0 3.9751 3.9751 83.68 0.0 0.0 0.0 12.956349637772746 24.08030623340529 12.956349637772746 16.989700043360184 0 0.4247425010840047 1.3010299956639813 0.0 0.0 [EP]S[DP]KYYY;[TP]D[DP]KYYY;[TP][QT][EP]YYY 3.9751;2.5112;1.4977 -;-;- 72 1 1.494 32988.2 1.0 3110 5195 8305 HBL1_DMSO_200M_050219_1,8307 HBL1_DMSO_200M_050219_1,8307,YYKPDSPEY True True YYKPDSPEY 43.856168 581.258837878704 135927696.0 8305.0 nc|ENSG00000163939|Q86U86-7|PBRM1;;ENSG00000163939|ENST00000707071|PBRM1;;nc|ENSG00000163939|Q86U86-8|PBRM1;;nc|ENSG00000163939|Q86U86-4|PBRM1;;nc|ENSG00000163939|Q86U86-5|PBRM1;;nc|ENSG00000163939|Q86U86|PBRM1;;nc|ENSG00000163939|Q86U86-2|PBRM1;;nc|ENSG00000163939|Q86U86-3|PBRM1;;nc|ENSG00000163939|Q86U86-6|PBRM1;;nc|ENSG00000163939|Q86U86-9|PBRM1 7.474932193756103 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8308 43.857 4.2 12273000.0 25 0 1479800.0 + 32601 SAVTSVAKV 9 72 431.2554850373836 860.4964171415671 2 431.2556335330009 MULTI CID FTMS 0 0 0 8305 13838963.0 0.164539591334829 -2 0.1211280822753906 3 Unmodified _SAVTSVAKV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 43.77239144664712 0.0547478964384323 3 {[SA]|[TG]}VTSVAKV 9 0 + 79.272 0.0 0.0 9.2123 9.2123 98.034 0.0 0.0 0.0 57.3605009446965 10.908458057352178 10.908458057352178 26.95046257204388 0 1.2302046884880935 2.0 0.3494850021680094 0.0 + + {[SA]|[TG]}VTSVAKV;{[SA]|[TG]}V{[WT]|[RM]}AKV;{[SA]|[TG]}{[WT]|[RM]}VAKV 9.2123;6.0804;5.2881 +;-;- + 180 + 1 1.494 51762.4 1.0 3111 5195 8305 HBL1_DMSO_200M_050219_1,8308 HBL1_DMSO_200M_050219_1,8308,SAVTSVAKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8309 43.859 17.0 2196800.0 25 0 245330.0 -1 RAWDMRYYMNQ 11 51 775.3365360844654 1548.6585192357306 2 775.3373290896416 MULTI CID FTMS 0 0 0 8305 2915799.25 0.4061057170418203 2 -0.1567802429199218 4 Oxidation (M) _RAWDM(Oxidation (M))RYYMNQ_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF;ENST00000591149.5_1_19:2807001-2808381:+|nuORF 1.3295316138638542 0.8688751186870782 3 AQQNA{M(Oxidation (M))|F}[YQ] 8 -1 45.394 0.0 0.0 2.9312 0.0 0.0 580.2247181623062 0.0 580.2247181623062 0.0 17.36494082808356 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 AQQNA{M(Oxidation (M))|F}[YQ] 2.9312 - 192 1 1.494 32832.0 1.0 3112 5195 8305 HBL1_DMSO_200M_050219_1,8309 HBL1_DMSO_200M_050219_1,8309,RAWDMRYYMNQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8310 43.86 19.0 2646700.0 25 0 374770.0 + 12984 HAIPSMSHV 9 69 489.7444156800439 977.4742784268878 2 489.7450439333916 MULTI CID FTMS 0 0 0 8305 2744557.0 0.8174012763495311 -1 0.1052932739257812 5 Unmodified _HAIPSMSHV_ ENSG00000137074|ENST00000379817|APTX;ENST00000479656.5_1_9:32974523-32984658:-|nuORF;nc|ENSG00000137074|Q7Z2E3-10|APTX;nc|ENSG00000137074|Q7Z2E3-11|APTX;nc|ENSG00000137074|Q7Z2E3-2|APTX;nc|ENSG00000137074|Q7Z2E3-3|APTX;nc|ENSG00000137074|Q7Z2E3-4|APTX;nc|ENSG00000137074|Q7Z2E3-5|APTX;nc|ENSG00000137074|Q7Z2E3-6|APTX;nc|ENSG00000137074|Q7Z2E3-8|APTX;nc|ENSG00000137074|Q7Z2E3-9|APTX;nc|ENSG00000137074|Q7Z2E3|APTX 42.09456458481378 0.0639583784996157 3 [HA]{I|L}PA{M(Oxidation (M))|F}S[HV] 9 1 + 41.55 0.0 0.0 4.2508 4.2508 76.871 0.0 0.0 0.0 27.2717530379002 1.9041424148383608 1.9041424148383608 4.392653074926045 0 1.6989700043360187 1.5228787452803376 0.0 0.0 [HA]{I|L}PA{M(Oxidation (M))|F}S[HV];[HA]{I|L}[WE]S[HV];[HA][WY]V[R{M(Oxidation (M))|F}];[HA]{I|L}[DC][{I|L}A][HV];[HA]{I|L}[NS]NS[HV];[HA][WK]NS[HV];[HA][KC]{[{M(Oxidation (M))|F}H]|[RQ]}[HV];YY[KC]V[R{M(Oxidation (M))|F}];YY{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[HV];[HS][W{M(Oxidation (M))|F}]V[R{M(Oxidation (M))|F}] 4.2508;3.8014;3.5522;3.3653;3.306;2.4397;2.3725;2.1978;1.9726;1.3013 -;-;-;-;-;-;-;-;-;- 114 + 1 1.494 43637.7 1.0 3113 5195 8305 HBL1_DMSO_200M_050219_1,8310 HBL1_DMSO_200M_050219_1,8310,HAIPSMSHV True True HAIPSMSHV 43.859716 489.745043933392 20956652.0 8305.0 nc|ENSG00000137074|Q7Z2E3|APTX;;nc|ENSG00000137074|Q7Z2E3-9|APTX;;nc|ENSG00000137074|Q7Z2E3-11|APTX;;nc|ENSG00000137074|Q7Z2E3-4|APTX;;nc|ENSG00000137074|Q7Z2E3-3|APTX;;ENST00000479656.5_1_9:32974523-32984658:-|nuORF;;nc|ENSG00000137074|Q7Z2E3-2|APTX;;nc|ENSG00000137074|Q7Z2E3-8|APTX;;ENSG00000137074|ENST00000379817|APTX;;nc|ENSG00000137074|Q7Z2E3-5|APTX;;nc|ENSG00000137074|Q7Z2E3-10|APTX;;nc|ENSG00000137074|Q7Z2E3-6|APTX 7.463035901387532 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8311 43.861 19.0 2855800.0 25 0 615590.0 + 3274 AYHGHGVSAF 10 66 349.16652612607004 1044.47774897841 3 349.1662780642509 MULTI CID FTMS 0 0 0 8305 2565322.5 0.1808149946072452 3 -0.26007080078125 6 Unmodified _AYHGHGVSAF_ ENST00000429772.6_1_12:48357436-48358078:+|nuORF;ENST00000550146.5_1_12:48357374-48358078:+|nuORF 23.1484247019978 0.4485954791219598 3 VSA{M(Oxidation (M))|F} 4 6 21.37 0.0 0.0 2.046 0.0 0.0 622.262498924025 0.0 622.262498924025 0.0 5.885540741363187 0.0 0.0 0 0.3182503180159344 0.0 0.5 0.0 + VSA{M(Oxidation (M))|F} 2.046 + + 44 1 1.494 52873.0 1.0 3114 5195 8305 HBL1_DMSO_200M_050219_1,8311 HBL1_DMSO_200M_050219_1,8311,AYHGHGVSAF False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8312 43.862 24.0 2313700.0 25 0 266800.0 + 3782 DAHRSHPFI 9 68 540.2724112047138 1078.5302694762274 2 540.2728759646416 MULTI CID FTMS 0 0 0 8305 2290768.0 0.9277014143108488 -1 0.1052932739257812 7 Unmodified _DAHRSHPFI_ ENSG00000105669|ENST00000262812|COPE;ENST00000595984.5_1_19:19010490-19010792:-|nuORF;ENST00000598969.5_1_19:19010490-19016602:-|nuORF;nc|ENSG00000105669|O14579-2|COPE;nc|ENSG00000105669|O14579-3|COPE 24.99096001346401 0.2132109383330889 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TA][TA]DP{M(Oxidation (M))|F}{I|L} 10 5 + 51.929 0.0 0.0 4.8148 4.8148 86.566 0.0 0.0 0.0 0.6939925200716601 42.88750309660614 0.6939925200716601 19.68765315847925 0 0.9247425010840048 1.6989700043360187 0.3807196863200844 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TA][TA]DP{M(Oxidation (M))|F}{I|L};{I|L}[YV]D[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L};[YV][PG][TA]DP{M(Oxidation (M))|F}{I|L};{I|L}[YV]H[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}{I|L};[YV]{I|L}{[QG]|[NA]}[HC]{M(Oxidation (M))|F}{I|L} 4.8148;2.9893;2.5914;1.8001;1.796 -;-;-;-;- 144 1 1.494 50031.7 1.0 3115 5195 8305 HBL1_DMSO_200M_050219_1,8312 HBL1_DMSO_200M_050219_1,8312,DAHRSHPFI False True DAHRSHPFI 43.862074 540.272875964642 75991528.0 8305.0 ENSG00000105669|ENST00000262812|COPE;;nc|ENSG00000105669|O14579-3|COPE;;ENST00000595984.5_1_19:19010490-19010792:-|nuORF;;nc|ENSG00000105669|O14579-2|COPE;;ENST00000598969.5_1_19:19010490-19016602:-|nuORF 3.3929193019866943 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8313 43.863 23.0 2192400.0 25 0 185010.0 24740 MPEPVYFHC 9 75 374.829023628662 1121.465241486186 3 374.8292419314384 MULTI CID FTMS 0 0 0 8305 2251180.25 1.0 0 0.0 8 Unmodified _MPEPVYFHC_ ENSG00000128607|ENST00000335420|KLHDC10;nc|ENSG00000128607|Q6PID8-2|KLHDC10 12.240655878213236 0.5053430591993562 3 [EP]MP 4 7 38.165 0.0 0.0 3.4032 0.0 0.0 0.0 664.2537296055797 664.2537296055797 25.94696122009003 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.2887254899964357 0.0 [EP]MP 3.4032 - 86 1 1.494 48822.5 1.0 3116 5195 8305 HBL1_DMSO_200M_050219_1,8313 HBL1_DMSO_200M_050219_1,8313,MPEPVYFHC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8314 43.864 25.0 2003900.0 25 0 166630.0 + 3783 DAHRSHPFI 9 67 360.5174059707423 1078.530388512427 3 360.5173217654228 MULTI CID FTMS 0 0 0 8305 2208865.0 1.0 0 0.0 9 Unmodified _DAHRSHPFI_ ENSG00000105669|ENST00000262812|COPE;ENST00000595984.5_1_19:19010490-19010792:-|nuORF;ENST00000598969.5_1_19:19010490-19016602:-|nuORF;nc|ENSG00000105669|O14579-2|COPE;nc|ENSG00000105669|O14579-3|COPE 15.847184025352805 0.4077185912009129 3 WNP{M(Oxidation (M))|F}{I|L} 5 6 20.081 0.0 0.0 1.8619 0.0 0.0 403.2050233774645 0.0 403.2050233774645 0.0 9.367676155296962 0.0 0.0 0 0.5 0.0 0.0 0.0 WNP{M(Oxidation (M))|F}{I|L} 1.8619 - 109 + 1 1.494 48619.4 1.0 3117 5195 8305 HBL1_DMSO_200M_050219_1,8314 HBL1_DMSO_200M_050219_1,8314,DAHRSHPFI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8315 43.866 20.0 3064800.0 25 0 128110.0 -1 LGGSLMEYAI 10 97 535.2672412003147 1068.5199294674294 2 535.2676269412041 MULTI CID FTMS 0 0 0 8305 1941294.375 0.0600727861289978 -3 0.1677322387695312 10 Oxidation (M) _LGGSLM(Oxidation (M))EYAI_ ENSG00000127483|ENST00000438032|HP1BP3;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;nc|ENSG00000127483|Q5SSJ5-3|HP1BP3 26.88365393820708 0.3646707531412818 3 QDT[WK]A{I|L} 7 -1 52.585 0.0 0.0 4.9213 0.0 0.0 208.08433484027933 0.0 208.08433484027933 0.0 34.673917382120706 0.0 0.0 0 1.7614393726401687 0.0 0.4247425010840047 0.2887254899964357 QDT[WK]A{I|L} 4.9213 - 212 + 1 1.494 52399.1 1.0 3118 5195 8305 HBL1_DMSO_200M_050219_1,8315 HBL1_DMSO_200M_050219_1,8315,LGGSLMEYAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8316 43.867 32.0 1538200.0 25 0 171910.0 + 5784 DPPPGSHVI 9 84 459.7369120917008 917.4592712502016 2 459.7361328005791 MULTI CID FTMS 0 0 0 8305 1485679.875 0.0592208883755837 25 -2.1113243103027344 11 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 34.10243960390752 0.1078313939113124 3 [DP]PP[SG]H{I|L}V 9 2 + 45.785 0.0 0.0 4.9904 4.9904 82.116 0.0 0.0 0.0 29.358500049694527 4.843050114734808 4.843050114734808 7.166987712964499 0 0.8494850021680094 2.0 0.0 0.0 [DP]PP[SG]H{I|L}V;[DP]{I|L}[{I|L}T]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V;[DP]PP[SG]HV{I|L};[DP][{M(Oxidation (M))|F}V][QT]{I|L}V;[DP][{M(Oxidation (M))|F}V][QT]V{I|L} 4.9904;4.2093;4.0061;2.762;1.7776 -;-;+;-;- + 179 + 1 1.494 41582.8 1.0 3119 5195 8305 HBL1_DMSO_200M_050219_1,8316 HBL1_DMSO_200M_050219_1,8316,DPPPGSHVI True True DPPPGSHVI 43.866789 459.736132800579 1917657600.0 8305.0 nc|ENSG00000130305|Q96P11-5|NSUN5;;nc|ENSG00000130305|Q96P11-3|NSUN5;;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;;ENSG00000130305|ENST00000438747|NSUN5;;nc|ENSG00000130305|Q96P11|NSUN5;;nc|ENSG00000130305|Q96P11-4|NSUN5 5.77035125096639 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8317 43.868 62.0 1120400.0 25 0 100790.0 + 32282 RWPKKSAEF 9 94 383.5450870782333 1147.6134318349 3 383.5449706912041 MULTI CID FTMS 0 0 0 8305 941100.3125 0.2411246722520834 14 -1.1913070678710938 12 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 18.1463463914782 0.3454829746528889 3 [WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F} 9 0 + 34.415 0.0 0.0 2.9988 2.9988 73.418 0.0 0.0 0.0 4.696596782814815 2.998037644757052 2.998037644757052 4.018637558036676 0 0.4247425010840047 1.3010299956639813 0.0 0.3054621874040891 + + [WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F};[WR][KP]K{[SA]|[TG]}{M(Oxidation (M))|F}E;[WR][KP]K{[WT]|[RM]}{M(Oxidation (M))|F};[KP][WR]K{[SA]|[TG]}E{M(Oxidation (M))|F};[KP][WR]K{[SA]|[TG]}{M(Oxidation (M))|F}E;[KP][WR]K{[WT]|[RM]}{M(Oxidation (M))|F} 2.9988;2.6487;2.4343;1.2522;0.90206;0.68774 +;-;-;-;-;- + 176 1 1.494 63461.4 1.0 3120 5195 8305 HBL1_DMSO_200M_050219_1,8317 HBL1_DMSO_200M_050219_1,8317,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8318 43.87 96.0 686440.0 25 0 102530.0 + 16395 IYQSKVREL 9 82 379.2203914311493 1134.639344893648 3 379.2204467654228 MULTI CID FTMS 0 0 0 8305 658996.0 0.0188485723392576 6 -0.5219993591308594 13 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 23.78978130925829 0.2284941198415988 3 {I|L}YQSKV 6 3 61.397 0.0 0.0 5.4112 0.0 0.0 0.0 413.21503626041255 413.21503626041255 47.58482875397139 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.5 + {I|L}YQSKV 5.4112 + + 78 + 1 1.494 58747.8 1.0 3121 5195 8305 HBL1_DMSO_200M_050219_1,8318 HBL1_DMSO_200M_050219_1,8318,IYQSKVREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8319 43.873 154.0 788420.0 25 0 81310.0 + 36347 SYPDNHQEF 9 113 568.7357140102238 1135.4568750872477 2 568.7357665896416 MULTI CID FTMS 0 0 0 8305 602485.0625 0.8929144830707461 3 -0.26007080078125 14 Unmodified _SYPDNHQEF_ ENSG00000169967|ENST00000682094|MAP3K2 41.8396318013385 0.0653578398400075 3 NDP[MT] 5 8 30.292 0.0 0.0 2.6678 0.0 0.0 559.2341175763687 0.0 559.2341175763687 0.0 -1.5405723688054351 -1.5405723688054351 0.0 0 0.3807196863200844 0.0 0.3252574989159953 1.0044321917401078 NDP[MT] 2.6678 - 705 1 1.494 94812.7 1.0 3122 5195 8305 HBL1_DMSO_200M_050219_1,8319 HBL1_DMSO_200M_050219_1,8319,SYPDNHQEF True True SYPDNHQEF 43.873458 568.735766589642 19564398.0 8305.0 ENSG00000169967|ENST00000682094|MAP3K2 7.441696802775065 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8320 43.882 491.0 396760.0 25 0 13652.0 -1 0 96 701.3274547765524 3501.6008915497614 5 701.5282470583916 MULTI CID FTMS 0 0 0 8305 424416.09375 0.8314896010191435 5 -0.4215011596679687 15 3 QGTP 4 -1 33.175 0.0 0.0 0.94743 0.0 0.0 3100.430719078876 0.0 3100.430719078876 0.0 5.4722877531575165 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 QGTP 0.94743 - 100 1 1.494 144063.2 1.0 3123 5195 8305 HBL1_DMSO_200M_050219_1,8320 HBL1_DMSO_200M_050219_1,8320, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8321 43.886 201.0 680060.0 25 0 164610.0 + 3812 DAIPSAKV 8 120 400.7292060139836 799.4438590947672 2 400.7292053103447 MULTI CID FTMS 0 0 0 8305 396631.0625 0.2800815869693879 -2 0.1211280822753906 16 Unmodified _DAIPSAKV_ ENSG00000104218|ENST00000678616|CSPP1;ENST00000521168.5_1_8:68070723-68107652:+|nuORF;nc|ENSG00000104218|Q1MSJ5-1|CSPP1;nc|ENSG00000104218|Q1MSJ5-2|CSPP1;nc|ENSG00000104218|Q1MSJ5|CSPP1 32.30548876998284 0.3644845974844379 3 [PS]AKV 5 3 30.92 0.0 0.0 3.8677 0.0 0.0 0.0 314.1331956028328 314.1331956028328 1.738648650023645 0.0 0.0 0.0 0 0.0 0.494850021680094 1.1278623208748888 0.0 + [PS]AKV 3.8677 + + 195 1 1.494 109560.8 1.0 3124 5195 8305 HBL1_DMSO_200M_050219_1,8321 HBL1_DMSO_200M_050219_1,8321,DAIPSAKV False True DAIPSAKV 43.885964 400.729205310345 8605800.0 8305.0 nc|ENSG00000104218|Q1MSJ5-1|CSPP1;;nc|ENSG00000104218|Q1MSJ5-2|CSPP1;;nc|ENSG00000104218|Q1MSJ5|CSPP1;;ENST00000521168.5_1_8:68070723-68107652:+|nuORF;;ENSG00000104218|ENST00000678616|CSPP1 4.813564618428548 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8322 43.89 236.0 234390.0 25 0 16065.0 37983 TNIIMMNTL 9 115 525.7689973867708 1049.5234418403415 2 525.7696411013603 MULTI CID FTMS 0 0 0 8305 337005.375 0.3946445712169489 2 -0.1567802429199218 17 Unmodified _TNIIMMNTL_ ENSG00000198888|ENST00000361390|MT-ND1 21.53697664764585 0.2571576504437394 3 NGYNHT{I|L} 7 6 33.866 0.0 0.0 3.2268 0.0 0.0 232.1414050859533 0.0 232.1414050859533 0.0 21.62537573085605 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.2887254899964357 NGYNHT{I|L} 3.2268 - 550 + 1 1.494 46849.8 1.0 3125 5195 8305 HBL1_DMSO_200M_050219_1,8322 HBL1_DMSO_200M_050219_1,8322,TNIIMMNTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8323 43.9 518.0 641280.0 25 0 97954.0 + 3866 DAKLTRHSW 9 152 557.2926759022452 1112.5707988712902 2 557.2927123904228 MULTI CID FTMS 0 0 0 8305 318773.25 0.3588421725309748 3 -0.26007080078125 18 Unmodified _DAKLTRHSW_ REV__ENSG00000123124|ENST00000517970|WWP1;REV__ENST00000518683.5_1_8:87393755-87423767:+|nuORF;REV__ENST00000523863.5_1_8:87386279-87399237:+|nuORF;REV__nc|ENSG00000123124|Q9H0M0-2|WWP1;REV__nc|ENSG00000123124|Q9H0M0-3|WWP1 30.63653989081413 0.1413794767160703 3 {[DA]|[EG]}KE{I|L} 5 -1 31.348 0.0 0.0 2.8176 0.0 0.0 0.0 553.261676771245 553.261676771245 2.377655435829883 0.0 0.0 0.0 0 0.0 0.9208187539523752 1.274227503252014 0.2742275032520141 {[DA]|[EG]}KE{I|L} 2.8176 - 1291 1 1.494 249401.5 1.0 3126 5195 8305 HBL1_DMSO_200M_050219_1,8323 HBL1_DMSO_200M_050219_1,8323,DAKLTRHSW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8324 43.903 157.0 555860.0 25 0 45560.0 + 32342 RYPDNLKHL 9 103 385.8804749105949 1154.6195953319846 3 385.8803283572197 MULTI CID FTMS 0 0 0 8305 309415.5 0.4445360338191072 -2 0.1211280822753906 19 Unmodified _RYPDNLKHL_ ENSG00000133773|ENST00000256151|CCDC59;ENST00000406807.2_1_6:149812705-149813218:-|nuORF;ENST00000552606.1_1_12:82750710-82752155:-|nuORF 35.61225514009592 0.0995432151795903 3 [YR][DP]N{I|L}KH{I|L} 9 0 + 61.149 0.0 0.0 5.296 5.296 85.372 0.0 0.0 0.0 21.896512253176823 46.544927940339775 21.896512253176823 9.208187539523747 0 1.579689690656103 1.5228787452803376 0.0 0.6989700043360187 + + [YR][DP]N{I|L}KH{I|L};[YR][DP]GG{I|L}KH{I|L};[YR]YY{I|L}KH{I|L};[YR][NP]D{I|L}KH{I|L};[DP][YR]N{I|L}KH{I|L};[DP][YR]GG{I|L}KH{I|L};[KA][HC][YR]KH{I|L} 5.296;4.4985;4.4975;4.3846;3.2452;2.4477;0.25309 +;-;-;-;-;-;- + 191 1 1.494 74536.5 1.0 3127 5195 8305 HBL1_DMSO_200M_050219_1,8324 HBL1_DMSO_200M_050219_1,8324,RYPDNLKHL True True RYPDNLKHL 43.902628 385.88032835722 4984499.0 8305.0 ENST00000552606.1_1_12:82750710-82752155:-|nuORF;;ENSG00000133773|ENST00000256151|CCDC59;;ENST00000406807.2_1_6:149812705-149813218:-|nuORF 7.31740681330363 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8325 43.913 564.0 262180.0 25 0 31674.0 -1 SPASMGRCCS 10 152 564.7152043517932 1127.4158557703863 2 564.7162353396416 MULTI CID FTMS 0 0 0 8305 268718.90625 1.0 0 0.0 20 2 Carbamidomethyl (C),Oxidation (M) _SPASM(Oxidation (M))GRC(Carbamidomethyl (C))C(Carbamidomethyl (C))S_ ENST00000394697.6_1_16:50322145-50324440:+|nuORF 23.78978130925829 0.4341852049148378 3 YYPDY 5 -1 42.307 0.0 0.0 3.7526 0.0 0.0 0.0 423.1258638971313 423.1258638971313 18.36696871556164 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.2742275032520141 0.0 YYPDY 3.7526 - 350 + 1 1.494 116467.0 1.0 3128 5195 8305 HBL1_DMSO_200M_050219_1,8325 HBL1_DMSO_200M_050219_1,8325,SPASMGRCCS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8327 43.917 16.0 2335200.0 25 0 420930.0 + 45829 YYPDGNSQY 9 68 553.724360109036 1105.4341672848718 2 553.7250244021416 MULTI CID FTMS 0 0 0 8326 3493571.25 0.8729093298449322 3 -0.2982902526855469 1 Unmodified _YYPDGNSQY_ nc|ENSG00000141380|Q15532-2|SS18 12.531546534597751 0.4974689918368763 3 YYGSQ 5 4 50.445 0.0 0.0 4.5634 0.0 0.0 0.0 504.1735831386406 504.1735831386406 34.9607625286837 0.0 0.0 0.0 0 0.5 2.0 0.5 0.4247425010840047 YYGSQ 4.5634 - 203 1 1.494 35267.6 1.0 3129 5196 8326 HBL1_DMSO_200M_050219_1,8327 HBL1_DMSO_200M_050219_1,8327,YYPDGNSQY False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8328 43.918 34.0 1156200.0 25 0 81572.0 + 3276 AYHGHGVSAF 10 81 523.2458478206078 1044.4771427080154 2 523.2462646365166 MULTI CID FTMS 0 0 0 8326 1144251.625 0.0843516300980047 4 -0.3597450256347656 2 Unmodified _AYHGHGVSAF_ ENST00000429772.6_1_12:48357436-48358078:+|nuORF;ENST00000550146.5_1_12:48357374-48358078:+|nuORF 44.40701690623563 0.1129771813061863 3 GVS{[MS]|[{M(Oxidation (M))|F}A]} 5 5 31.07 0.0 0.0 2.9747 0.0 0.0 565.23930556465 0.0 565.23930556465 0.0 15.585456211725202 0.0 0.0 0 0.6861818737241735 0.0 0.5 0.0 + GVS{[MS]|[{M(Oxidation (M))|F}A]} 2.9747 + + 64 1 1.494 37971.7 1.0 3130 5196 8326 HBL1_DMSO_200M_050219_1,8328 HBL1_DMSO_200M_050219_1,8328,AYHGHGVSAF True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8329 43.919 26.0 3048600.0 25 0 413720.0 22090 LPPPVAVRK 9 72 326.2149630110197 975.6230596332592 3 326.2147704958916 MULTI CID FTMS 0 0 0 8326 1824494.25 0.632851495786252 5 -0.4602432250976562 3 Unmodified _LPPPVAVRK_ ENSG00000184271|ENST00000333640|POU6F1;nc|ENSG00000184271|Q14863|POU6F1 15.847184025352805 0.4077185912009129 3 {I|L}PP{I|L}K 5 5 53.488 0.0 0.0 5.4824 0.0 0.0 0.0 424.2347506158813 424.2347506158813 48.00312209084183 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {I|L}PP{I|L}K 5.4824 - 37 + 1 1.494 67450.8 1.0 3131 5196 8326 HBL1_DMSO_200M_050219_1,8329 HBL1_DMSO_200M_050219_1,8329,LPPPVAVRK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8330 43.92 50.0 820320.0 25 0 70240.0 -1 GQEFMTTCLVD 11 61 650.7808589269749 1299.5471649207498 2 650.7816039919853 MULTI CID FTMS 0 0 0 8326 1336183.0 0.5684252395588502 2 -0.1983146667480468 4 Carbamidomethyl (C) _GQEFMTTC(Carbamidomethyl (C))LVD_ CON__Q0VCM5 8.155526934196011 0.8366696279279818 3 DEAQQNA{M(Oxidation (M))|F} 8 -1 69.501 0.0 0.0 5.3481 0.0 0.0 378.16536147285314 0.0 378.16536147285314 0.0 35.688812894078126 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.0 DEAQQNA{M(Oxidation (M))|F} 5.3481 - 385 1 1.494 35518.5 1.0 3132 5196 8326 HBL1_DMSO_200M_050219_1,8330 HBL1_DMSO_200M_050219_1,8330,GQEFMTTCLVD False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8331 43.922 60.0 766210.0 25 0 100260.0 -1 MECHSWSF 8 71 521.6910799804567 1041.3676070277131 2 521.6917602419853 MULTI CID FTMS 0 0 0 8326 1150703.25 0.6326909854572756 -3 0.1828842163085937 5 Oxidation (M) _M(Oxidation (M))ECHSWSF_ ENST00000606930.1_1_5:150891787-150892117:+|nuORF 14.581692164780916 0.6954967302934248 3 S{M(Oxidation (M))|F} 2 -1 30.217 0.0 0.0 2.9016 0.0 0.0 789.2560913959725 0.0 789.2560913959725 0.0 19.64333124107817 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 S{M(Oxidation (M))|F} 2.9016 + + 27 + 1 1.494 42666.2 1.0 3133 5196 8326 HBL1_DMSO_200M_050219_1,8331 HBL1_DMSO_200M_050219_1,8331,MECHSWSF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8332 43.925 146.0 1015800.0 25 0 64858.0 + 16396 IYQSKVREL 9 115 568.3269002633236 1134.6392475934472 2 568.3273803591728 MULTI CID FTMS 0 0 0 8326 572994.375 0.0233794085612562 7 -0.6428451538085938 6 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 53.40400417844725 0.0329064971918313 3 {I|L}YQSKV 6 3 79.148 0.0 0.0 6.9756 0.0 0.0 0.0 413.2157381647094 413.2157381647094 57.62035613508482 0.0 0.0 0.0 0 0.75 1.6989700043360187 1.0189301784845295 0.3807196863200844 + {I|L}YQSKV 6.9756 + + 810 + 1 1.494 112690.1 1.0 3134 5196 8326 HBL1_DMSO_200M_050219_1,8332 HBL1_DMSO_200M_050219_1,8332,IYQSKVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8333 43.928 148.0 485750.0 25 0 37598.0 + -1 HARCILDL 8 128 499.2669171026152 996.5192812720304 2 499.2684509158134 MULTI CID FTMS 0 0 0 8326 376046.03125 0.5699888261382158 4 -0.3597450256347656 7 Carbamidomethyl (C) _HARC(Carbamidomethyl (C))ILDL_ REV__ENSG00000172531|ENST00000376745|PPP1CA;REV__ENSG00000186298|ENST00000335007|PPP1CC;REV__ENSG00000213639|ENST00000395366|PPP1CB;REV__ENST00000462832.5_1_2:29006774-29038903:+|nuORF;REV__ENST00000526510.5_1_11:67166008-67168740:-|nuORF;REV__ENST00000532279.1_1_11:67166350-67167062:-|nuORF;REV__ENST00000532446.5_1_11:67166008-67168991:-|nuORF;REV__nc|ENSG00000172531|P62136-2|PPP1CA;REV__nc|ENSG00000172531|P62136-3|PPP1CA;REV__nc|ENSG00000186298|P36873-2|PPP1CC 19.438996006549623 0.6237395211498085 3 [HA]YK{[HG]|PP}SVV 9 -1 + 29.402 0.0 0.0 2.9505 2.9505 77.161 0.0 0.0 0.0 6.180363354823378 8.6218916694916 6.180363354823378 7.953290060621175 0 0.6989700043360187 0.958607314841775 0.3494850021680094 0.0 [HA]YK{[HG]|PP}SVV;[TP]AQ[KG]APEV;[TP]AQ[KQ]PEV;[R{M(Oxidation (M))|F}]{[HG]|PP}[VG]PEV;[R{M(Oxidation (M))|F}]{[NV]|[RG]}HPEV;[R{M(Oxidation (M))|F}]{[HG]|PP}[VG]PD{I|L};[HA]YRRPTP;[TP][H{I|L}]{[SA]|[TG]}SSVV;[R{M(Oxidation (M))|F}]{[NV]|[RG]}HPD{I|L};[TP]AQ[K{I|L}]P{[QD]|[EN]|[WG]|[KD]|[RS]} 2.9505;2.1524;1.9757;1.7592;1.6437;1.4885;1.4777;1.3966;1.3729;1.1143 -;-;-;-;-;-;-;-;-;- 666 1 1.494 59516.4 1.0 3135 5196 8326 HBL1_DMSO_200M_050219_1,8333 HBL1_DMSO_200M_050219_1,8333,HARCILDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8334 43.937 538.0 370770.0 25 0 53037.0 -1 QYDYCNSWS 9 163 611.7283339090752 1221.4421148849503 2 611.7292358279228 MULTI CID FTMS 0 0 0 8326 338477.25 0.1096876414227167 -2 0.1670494079589843 8 Carbamidomethyl (C) _QYDYC(Carbamidomethyl (C))NSWS_ ENSG00000240053|ENST00000375864|LY6G5B;nc|ENSG00000240053|Q8NDX9-2|LY6G5B 17.11289562659939 0.3734572693229295 3 [YQ]{I|L}ENYNS 8 -1 65.278 0.0 0.0 5.3443 0.0 0.0 0.0 206.99089990787343 206.99089990787343 45.02714242295268 0.0 0.0 0.0 0 1.9749073637206087 0.9208187539523752 0.9361818737241734 1.0451140161145327 [YQ]{I|L}ENYNS 5.3443 - 1471 + 1 1.494 147365.5 1.0 3136 5196 8326 HBL1_DMSO_200M_050219_1,8334 HBL1_DMSO_200M_050219_1,8334,QYDYCNSWS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8335 43.939 43.0 1237400.0 25 0 87163.0 + 33197 SFHGQLIPF 9 98 523.279304604732 0 523.2781860232353 PEAK CID FTMS 0 0 0 8326 272993.5625 1.0 0 0.0 9 Unmodified _SFHGQLIPF_ REV__ENSG00000136492|ENST00000259008|BRIP1;REV__nc|ENSG00000136492|Q9BX63-2|BRIP1 7.910154910731844 0.3362437653303669 3 SVG 3 -1 16.682 0.0 0.0 1.5971 0.0 0.0 236.1813689400961 562.2178438775999 798.399212817696 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 SVG 1.5971 - 275 + 1 1.494 46530.1 1.0 3137 5196 8326 HBL1_DMSO_200M_050219_1,8335 HBL1_DMSO_200M_050219_1,8335,SFHGQLIPF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8336 43.95 633.0 261790.0 25 0 12029.0 + 17937 KQYEAYVQA 9 192 550.2744419255071 1098.534330917814 2 550.2750121951103 MULTI CID FTMS 0 0 0 8326 228529.671875 0.9017759671160862 -1 0.0617561340332031 10 Unmodified _KQYEAYVQA_ ENSG00000146457|ENST00000621533|WTAP;nc|ENSG00000146457|Q15007-2|WTAP 71.92227651296345 0.0203558744033348 3 [AG]YKEAYVAQ 10 5 + 54.585 0.0 0.0 4.9689 4.9689 81.514 0.0 0.0 0.0 6.645598938159864 5.937040524562249 5.937040524562249 6.645598938159864 0 0.6721675119240518 1.6989700043360187 0.9916440611282624 0.7134679910804405 [AG]YKEAYVAQ;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GKEAYVAQ;[YQ]KEAYVAQ;{[CP]|[EA]}Y[KG]AYVAQ;{[CP]|[EA]}Y[KQ]YVAQ;{[CP]|[EA]}YYQKVAQ;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E[KG]AYVAQ;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E[KQ]YVAQ;[AG]YKEAVYAQ;[YE]A[KG]AYVAQ 4.9689;4.3639;4.1723;3.9227;3.7635;3.5533;3.4015;3.2423;3.196;3.1321 -;-;-;-;-;-;-;-;-;- 3993 1 1.494 130675.9 1.0 3138 5196 8326 HBL1_DMSO_200M_050219_1,8336 HBL1_DMSO_200M_050219_1,8336,KQYEAYVQA True True KQYEAYVQA 43.949583 550.27501219511 1362853.375 8326.0 ENSG00000146457|ENST00000621533|WTAP;;nc|ENSG00000146457|Q15007-2|WTAP 6.948326428731282 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8337 43.963 799.0 280990.0 25 0 13256.0 + 17127 KLHDVELHQV 10 248 406.55934592192 1216.65620836596 3 406.5590698122978 MULTI CID FTMS 0 0 0 8326 224310.359375 0.9970069366120886 1 -0.0950241088867187 11 Unmodified _KLHDVELHQV_ ENSG00000069966|ENST00000261837|GNB5;ENST00000560075.1_1_15:52439654-52476873:-|nuORF;nc|ENSG00000069966|O14775-2|GNB5;nc|ENSG00000069966|O14775-3|GNB5 62.78007862980855 0.029293533665634 3 [VP]{I|L}WEP{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]} 10 6 + 37.412 0.0 0.0 3.075 3.075 69.831 0.0 0.0 0.0 1.0101741803505533 12.33944188701716 1.0101741803505533 1.7559213027123306 0 0.4417509724019616 0.8860566476931632 0.2742275032520141 0.0 [VP]{I|L}WEP{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};[H{I|L}]D{I|L}DK{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};[H{I|L}]EVDK{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};[KP][RN]EP{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}H{I|L}DK{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};[KP]QAAEP{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};[VP]{I|L}{[DA]|[EG]}EP{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};[H{I|L}]DKNP{I|L}[PG]{[QV]|[N{I|L}]|[RA]|[KV]};[H{I|L}]E[WR]{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};[KP]Q[RD]P{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]} 3.075;2.9307;2.8996;2.6618;2.5359;2.3803;2.3218;2.2969;2.2034;2.1491 -;-;-;-;-;-;-;-;-;- 2545 1 1.494 180655.8 1.0 3139 5196 8326 HBL1_DMSO_200M_050219_1,8337 HBL1_DMSO_200M_050219_1,8337,KLHDVELHQV True True KLHDVELHQV 43.963389 406.559069812298 1053446.75 8326.0 ENST00000560075.1_1_15:52439654-52476873:-|nuORF;;nc|ENSG00000069966|O14775-2|GNB5;;ENSG00000069966|ENST00000261837|GNB5;;nc|ENSG00000069966|O14775-3|GNB5 8.023186365763346 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8338 43.966 136.0 411190.0 25 0 50872.0 + 29976 QSYSPPTPG 9 83 467.2211919109728 932.4278308887456 2 467.2202636599541 MULTI CID FTMS 0 0 0 8326 201688.84375 1.0 0 0.0 12 Unmodified _QSYSPPTPG_ REV__ENST00000538448.5_1_20:30689318-30689537:+|nuORF 15.847184025352805 0.4077185912009129 3 V 1 -1 13.099 0.0 0.0 1.4048 0.0 0.0 815.3484298040762 0.0 815.3484298040762 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4048 - 84 + 1 1.494 49258.3 1.0 3140 5196 8326 HBL1_DMSO_200M_050219_1,8338 HBL1_DMSO_200M_050219_1,8338,QSYSPPTPG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8339 43.979 754.0 133790.0 25 0 7203.8 + 26618 NVSITVECFSV 11 139 599.2963910601939 1196.5782291871876 2 599.7989379763603 MULTI CID FTMS 0 0 0 8326 142638.875 0.684312023724907 -2 0.1670494079589843 13 Unmodified _NVSITVECFSV_ REV__ENST00000225737.10_1_17:19844264-19845154:-|nuORF 12.240655878213236 0.7805268987462184 3 GV{I|L}NW 5 -1 33.844 0.0 0.0 2.8284 0.0 0.0 609.2503529279312 0.0 609.2503529279312 0.0 12.59386165355994 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3054621874040891 GV{I|L}NW 2.8284 - 426 1 1.494 74030.3 1.0 3141 5196 8326 HBL1_DMSO_200M_050219_1,8339 HBL1_DMSO_200M_050219_1,8339,NVSITVECFSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8340 43.992 757.0 276910.0 25 0 24489.0 + 45845 YYQCMGNYC 9 168 572.6990687690827 0 572.7000610232353 PEAK CID FTMS 0 0 0 8326 135729.09375 0.7585130400424371 1 -0.0950241088867187 14 Unmodified _YYQCMGNYC_ REV__ENSG00000168615|ENST00000487273|ADAM9;REV__nc|ENSG00000168615|Q13443-2|ADAM9 12.531546534597751 0.2832320739326029 3 YPD{M(Oxidation (M))|F}C(Carbamidomethyl (C))Q 6 -1 22.221 0.0 0.0 1.9435 0.0 0.0 163.06371745325788 167.04682336978752 330.1105408230454 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.805462187404089 YPD{M(Oxidation (M))|F}C(Carbamidomethyl (C))Q 1.9435 - 314 + 1 1.494 157416.0 1.0 3142 5196 8326 HBL1_DMSO_200M_050219_1,8340 HBL1_DMSO_200M_050219_1,8340,YYQCMGNYC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8341 44.008 800.0 123410.0 25 0 6445.9 -1 0 66 1115.1629266664377 5570.7782509991885 5 1115.965380847454 MULTI CID FTMS 0 0 0 8326 150268.09375 0.1995209666805252 16 -1.3656044006347656 15 3 EW 2 -1 7.9588 0.0 0.0 0.14287 0.0 0.0 4456.214726684539 796.4302462213499 5252.644972905889 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EW 0.14287 - 27 + 1 1.494 66470.5 0.75 3143 5196 8326 HBL1_DMSO_200M_050219_1,8341 HBL1_DMSO_200M_050219_1,8341, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8343 44.012 9.7 4252000.0 25 0 345560.0 + 14433 IFQEPTEPK 9 81 544.7845789551706 1087.554604977141 2 544.7854492068291 MULTI CID FTMS 0 0 0 8342 3810593.25 0.567560922498887 1 -0.1032905578613281 1 Unmodified _IFQEPTEPK_ ENSG00000171848|ENST00000304567|RRM2;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 39.94969957227396 0.0757326808254658 3 {I|L}{M(Oxidation (M))|F}QE 4 5 47.735 0.0 0.0 4.3892 0.0 0.0 0.0 567.2788650942107 567.2788650942107 37.554036303449934 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.805462187404089 0.4247425010840047 + {I|L}{M(Oxidation (M))|F}QE 4.3892 + + 85 + 1 1.493 38641.9 1.0 3144 5197 8342 HBL1_DMSO_200M_050219_1,8343 HBL1_DMSO_200M_050219_1,8343,IFQEPTEPK True True IFQEPTEPK 44.011771 544.785449206829 91824360.0 8342.0 ENSG00000171848|ENST00000304567|RRM2;;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;;nc|ENSG00000171848|P31350-2|RRM2 7.001195112864177 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8344 44.013 13.0 4906300.0 25 0 619810.0 20986 LNQKLNLNI 9 82 357.21692630247696 1068.628949507631 3 357.2167236208916 MULTI CID FTMS 0 0 0 8342 3886434.0 0.3127459350183945 -2 0.1567802429199218 2 Unmodified _LNQKLNLNI_ ENST00000460472.6_3_2:179604374-179604491:-|nuORF 21.74664581756881 0.2544899275067181 3 QKS{I|L}HVQ 7 7 38.524 0.0 0.0 3.605 0.0 0.0 230.16361296289296 0.0 230.16361296289296 0.0 5.348586301396736 0.0 0.0 0 0.0 0.0 0.5 0.805462187404089 QKS{I|L}HVQ 3.605 - 110 + 1 1.493 58873.6 1.0 3145 5197 8342 HBL1_DMSO_200M_050219_1,8344 HBL1_DMSO_200M_050219_1,8344,LNQKLNLNI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8345 44.014 30.0 1832600.0 25 0 175050.0 + 44551 YPESVGREV 9 66 518.2585837006741 1034.502614468148 2 518.2594482302666 MULTI CID FTMS 0 0 0 8342 1472597.25 0.0616307189739432 6 -0.547821044921875 3 Unmodified _YPESVGREV_ ENSG00000170471|ENST00000262879|RALGAPB;nc|ENSG00000170471|Q86X10-3|RALGAPB;nc|ENSG00000170471|Q86X10-4|RALGAPB 26.268140514670165 0.1969607489560049 3 YPESV 5 4 66.938 0.0 0.0 6.4706 0.0 0.0 0.0 456.2227342509385 456.2227342509385 42.75698788007091 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.8494850021680094 0.0 + YPESV 6.4706 + + 122 + 1 1.493 52287.2 1.0 3146 5197 8342 HBL1_DMSO_200M_050219_1,8345 HBL1_DMSO_200M_050219_1,8345,YPESVGREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8346 44.015 39.0 982760.0 25 0 62822.0 + 12049 GQDVGRYQV 9 72 511.2564897483176 1020.4984265634351 2 511.2569763064384 MULTI CID FTMS 0 0 0 8342 1089230.375 0.0670647406060877 6 -0.547821044921875 4 Unmodified _GQDVGRYQV_ ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF 24.020572477871973 0.2255576514309169 3 {[QG]|[NA]}DVV 5 4 29.208 0.0 0.0 2.8621 0.0 0.0 0.0 519.2243136041624 519.2243136041624 16.249387366083 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {[QG]|[NA]}DVV 2.8621 - 49 + 1 1.493 33439.1 1.0 3147 5197 8342 HBL1_DMSO_200M_050219_1,8346 HBL1_DMSO_200M_050219_1,8346,GQDVGRYQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8347 44.017 67.0 688550.0 25 0 43310.0 + 42734 VVDPNDPQM 9 68 507.7314825300917 1013.4484121269834 2 507.7316772341728 MULTI CID FTMS 0 0 0 8342 719586.375 0.0424925515571488 7 -0.6302070617675781 5 Unmodified _VVDPNDPQM_ ENSG00000151883|ENST00000281631|PARP8 37.97399986684836 0.0865783450051559 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RR[YE]M 7 7 + 27.478 0.0 0.0 2.7113 2.7113 81.862 0.0 0.0 0.0 -0.4541680232195233 0.2520813747068828 -0.4541680232195233 27.477656990787693 0 0.3252574989159953 1.3979400086720375 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RR[YE]M 2.7113 - 87 + 1 1.493 43128.6 1.0 3148 5197 8342 HBL1_DMSO_200M_050219_1,8347 HBL1_DMSO_200M_050219_1,8347,VVDPNDPQM True True VVDPNDPQM 44.016901 507.731677234173 327758136.0 8342.0 ENSG00000151883|ENST00000281631|PARP8 6.72850227355957 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8348 44.019 91.0 806370.0 25 0 51598.0 + -1 MPEWVVCAM 9 119 561.7401901671267 1121.4658274010533 2 561.7438842654228 MULTI CID FTMS 0 0 0 8342 494649.625 0.3650374280800448 2 -0.2032661437988281 6 Carbamidomethyl (C) _MPEWVVC(Carbamidomethyl (C))AM_ REV__ENSG00000032389|ENST00000382125|EIPR1 23.1484247019978 0.2366544122328345 3 MPEP 4 -1 50.622 0.0 0.0 4.5139 0.0 0.0 0.0 664.2592867486936 664.2592867486936 23.78840649139141 0.0 0.0 0.0 0 0.7134679910804405 1.154901959985743 0.0 0.0 MPEP 4.5139 - 104 + 1 1.493 59648.0 1.0 3149 5197 8342 HBL1_DMSO_200M_050219_1,8348 HBL1_DMSO_200M_050219_1,8348,MPEWVVCAM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8349 44.022 156.0 491050.0 25 0 49239.0 42768 VVHVHHPV 8 100 462.2633370071416 922.5121210810833 2 462.2637206912041 MULTI CID FTMS 0 0 0 8342 569392.0625 0.0111832319436995 20 -1.7393569946289062 7 Unmodified _VVHVHHPV_ ENSG00000131873|ENST00000254190|CHSY1;ENST00000543813.1_1_15:101717595-101728206:-|nuORF 11.114462752807354 0.7467182956244686 3 VVYRYGGG 8 6 49.831 0.0 0.0 5.4016 0.0 0.0 0.0 68.05137811832265 68.05137811832265 35.85138771613167 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VVYRYGGG 5.4016 - 320 + 1 1.493 67126.9 1.0 3150 5197 8342 HBL1_DMSO_200M_050219_1,8349 HBL1_DMSO_200M_050219_1,8349,VVHVHHPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8350 44.025 126.0 1440900.0 25 0 131620.0 43243 WDPSFEEAL 9 114 547.2451384267616 1092.4757239203232 2 547.2450439333916 MULTI CID FTMS 0 0 0 8342 528810.0625 0.6217414454860819 -1 0.0950241088867187 8 Unmodified _WDPSFEEAL_ ENSG00000073050|ENST00000262887|XRCC1 12.531546534597751 0.4974689918368763 3 N{[CP]|[EA]}A{I|L} 5 6 18.328 0.0 0.0 1.6776 0.0 0.0 0.0 591.1871003657287 591.1871003657287 6.73393743112328 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N{[CP]|[EA]}A{I|L} 1.6776 - 531 + 1 1.493 140685.2 1.0 3151 5197 8342 HBL1_DMSO_200M_050219_1,8350 HBL1_DMSO_200M_050219_1,8350,WDPSFEEAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8351 44.028 176.0 320570.0 25 0 41189.0 + 15156 LPAETRQEI 9 87 528.7879532974705 1055.561353661741 2 528.7882568240166 MULTI CID FTMS 0 0 0 8342 419296.28125 0.2829233646553013 -1 0.0950241088867187 9 Unmodified _IPAEIHYTL_ nc|ENSG00000089234|Q7Z569-2|BRAP;ENSG00000089234|ENST00000419234|BRAP 20.453626601364224 0.2830276176381075 3 {I|L}PAET 5 4 58.778 0.0 0.0 5.5684 0.0 0.0 0.0 541.2728975885374 541.2728975885374 42.466575849318914 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.0 {I|L}PAET 5.5684 - 56 + 1 1.493 49893.4 1.0 3152 5197 8342 HBL1_DMSO_200M_050219_1,8351 HBL1_DMSO_200M_050219_1,8351,IPAEIHYTL False False LPAETRQEI 44.028034 528.788256824017 7585646.5 8342.0 nc|ENSG00000089234|Q7Z569-2|BRAP;;ENSG00000089234|ENST00000419234|BRAP 4.533274968465169 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8352 44.03 102.0 259280.0 25 0 21480.0 41489 VPLYPSLSA 9 64 473.7637185632313 945.5128841932626 2 473.7643615603447 MULTI CID FTMS 0 0 0 8342 412623.03125 0.6789363067909997 -1 0.0950241088867187 10 Unmodified _VPLYPSLSA_ ENSG00000187833|ENST00000409561|C2orf78 12.531546534597751 0.4974689918368763 3 SA 2 7 15.191 0.0 0.0 1.6066 0.0 0.0 769.4326820221673 0.0 769.4326820221673 0.0 5.102131414518922 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + SA 1.6066 + + 11 + 1 1.493 27770.2 1.0 3153 5197 8342 HBL1_DMSO_200M_050219_1,8352 HBL1_DMSO_200M_050219_1,8352,VPLYPSLSA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8353 44.034 191.0 320580.0 25 0 21625.0 + 38555 TSVAKVVRV 9 103 479.8054547573901 957.5963565815804 2 479.8054077029228 MULTI CID FTMS 0 0 0 8342 393178.0625 0.5854109593311545 -1 0.0950241088867187 11 Unmodified _TSVAKVVRV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 56.17704186161178 0.0281986971544335 3 TSVAKV[RV]V 9 0 + 73.949 0.0 0.0 7.7224 7.7224 95.914 0.0 0.0 0.0 61.47473110079652 4.436974992327109 4.436974992327109 24.75895023531385 0 1.4386218330464624 1.3979400086720375 0.0 0.0 + + TSVAKV[RV]V;TSVV[KA][RV]V;V{[MG]|[TS]}AKV[RV]V;V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KV[RV]V 7.7224;5.1368;4.3179;3.1979 +;-;-;- + 131 + 1 1.493 51625.4 1.0 3154 5197 8342 HBL1_DMSO_200M_050219_1,8353 HBL1_DMSO_200M_050219_1,8353,TSVAKVVRV True True TSVAKVVRV 44.033869 479.805407702923 6401470.5 8342.0 nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27 6.057668685913086 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8354 44.042 452.0 149270.0 25 0 7849.2 -1 0 110 578.3381100049118 577.3308335383117 1 578.3383666872978 MULTI CID FTMS 0 0 0 8342 361396.71875 0.5057081592096104 6 -0.547821044921875 12 3 H 1 -1 10.278 0.0 0.0 1.7802 0.0 0.0 422.2609920849898 0.0 422.2609920849898 0.0 3.287886595888967 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.7802 - 18 + 1 1.493 56125.4 1.0 3155 5197 8342 HBL1_DMSO_200M_050219_1,8354 HBL1_DMSO_200M_050219_1,8354, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8355 44.052 601.0 411790.0 25 0 19979.0 + 38556 TSVAKVVRV 9 208 320.20602387880723 0 320.2062255740166 PEAK CID FTMS 0 0 0 8342 368140.0 0.7515549791742265 -1 0.0950241088867187 13 Unmodified _TSVAKVVRV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 41.8396318013385 0.053988301646488 3 AK{I|L}VS 5 6 14.017 0.0 0.0 2.1956 0.0 0.0 67.01591412124476 70.03064905338124 137.046563174626 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 AK{I|L}VS 2.1956 - 62 + 1 1.493 196138.2 1.0 3156 5197 8342 HBL1_DMSO_200M_050219_1,8355 HBL1_DMSO_200M_050219_1,8355,TSVAKVVRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8356 44.061 479.0 687050.0 25 0 36691.0 + 25300 NAFLEKKTV 9 238 525.3030248312219 1048.5914967292438 2 525.3032104372978 MULTI CID FTMS 0 0 0 8342 340985.78125 0.1182680743524466 -2 0.1567802429199218 14 Unmodified _NAFLEKKTV_ ENSG00000196199|ENST00000361479|MPHOSPH8;nc|ENSG00000196199|Q99549-2|MPHOSPH8 88.36371040165146 0.0154903161960565 3 NA{M(Oxidation (M))|F}{I|L}EKKS{I|L} 9 2 + 110.24 0.0 0.0 10.513 10.513 83.181 0.0 0.0 0.0 15.228787452803374 0.0573572012542911 0.0573572012542911 0.0573572012542911 0 2.018930178484529 1.6989700043360187 1.416386562212267 0.0 NA{M(Oxidation (M))|F}{I|L}EKKS{I|L};NA{M(Oxidation (M))|F}{I|L}EKKTV;NA{M(Oxidation (M))|F}{I|L}EK{[TV]|[{I|L}S]}K;{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}EKKTV;GGA{M(Oxidation (M))|F}{I|L}EKKTV;{[MS]|[{M(Oxidation (M))|F}A]}N{I|L}EKKTV;{[TV]|[{I|L}S]}GK{I|L}TCKTV;{[TV]|[{I|L}S]}GK{I|L}{M(Oxidation (M))|F}{[QG]|[NA]}TV;[KT]C{I|L}EKKTV;{[TV]|[{I|L}S]}G{I|L}KTCKTV 10.513;10.507;7.8195;6.1465;4.8281;3.893;3.0116;2.9532;2.9437;2.7501 -;+;-;+;-;-;-;-;-;- + 5056 + 1 1.493 249369.4 1.0 3157 5197 8342 HBL1_DMSO_200M_050219_1,8356 HBL1_DMSO_200M_050219_1,8356,NAFLEKKTV True True NAFLEKKTV 44.060876 525.303210437298 40220652.0 8342.0 nc|ENSG00000196199|Q99549-2|MPHOSPH8;;ENSG00000196199|ENST00000361479|MPHOSPH8 6.870820045471191 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8357 44.064 186.0 734290.0 25 0 95543.0 12435 GTTRALSHP 9 133 470.2562573350094 0 470.2484924197197 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _GTTRALSHP_ ENST00000551731.1_1_22:51065464-51066207:-|nuORF 18.1463463914782 0.2188250594445807 3 YGT 3 8 15.406 0.0 0.0 1.6416 0.0 0.0 158.08238664091886 456.25827966861567 614.3406663095345 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 YGT 1.6416 - 76 + 1 1.493 108258.1 1.0 3158 5197 8342 HBL1_DMSO_200M_050219_1,8357 HBL1_DMSO_200M_050219_1,8357,GTTRALSHP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8358 44.069 225.0 324800.0 25 0 22185.0 + 7305 EEVKPPDR 8 103 485.25352147984665 968.4924900264932 2 485.2533447146416 MULTI CID FTMS 0 0 0 8342 322761.0 0.0355602842786703 13 -1.1297760009765625 16 Unmodified _EEVKPPDR_ REV__ENSG00000248713|ENST00000511828|C4orf54 23.1484247019978 0.5573009939494978 3 EEAP 4 -1 36.995 0.0 0.0 3.8198 0.0 0.0 0.0 539.2961874630919 539.2961874630919 23.06933472159166 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 EEAP 3.8198 - 111 + 1 1.493 58577.4 1.0 3159 5197 8342 HBL1_DMSO_200M_050219_1,8358 HBL1_DMSO_200M_050219_1,8358,EEVKPPDR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8359 44.079 523.0 433570.0 25 0 56882.0 + 5056 DGYEQAARV 9 162 504.7407584104903 1007.4669638877806 2 504.7415649294853 MULTI CID FTMS 0 0 0 8342 302513.71875 0.9357746470704236 -1 0.0950241088867187 17 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 32.78568957990786 0.1150597335874693 3 [DG]YEQAARV 9 0 + 60.431 0.0 0.0 5.9983 5.9983 87.753 0.0 0.0 0.0 35.80073512626331 7.403405327429411 7.403405327429411 9.208187539523747 0 0.6643943297944485 0.8860566476931632 0.4247425010840047 0.3054621874040891 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YEQA{[NV]|[RG]}{I|L};[DG]YV[DN]ARV;[DG]YEQ[R{I|L}]Q;[DG]YEV[NG]RV;[DG]YE[AG]A{[NV]|[RG]}{I|L};[DG]YE[RN]RV;[DG]YVE[NG]RV;[DG]YEVRRN 5.9983;5.0843;4.7707;4.0061;3.9721;3.9624;3.8567;3.7929;3.5325;3.1868 +;-;-;-;-;-;-;-;-;- + 366 + 1 1.493 170944.4 1.0 3160 5197 8342 HBL1_DMSO_200M_050219_1,8359 HBL1_DMSO_200M_050219_1,8359,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8360 44.083 218.0 499470.0 25 0 65863.0 + 36431 SYYGRDRSPL 10 98 405.2031841827703 1212.5877231485108 3 405.5381347537041 MULTI CID FTMS 0 0 0 8342 204353.21875 0.6201767464506982 -1 0.0950241088867187 18 Unmodified _SYYGRDRSPL_ ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 21.799462835604743 0.4789045305445478 3 SY{I|L}{[DS]|[MA]|[CV]|TT}R{[WT]|[RM]}W 9 6 + 61.405 0.0 0.0 5.0639 5.0639 87.512 0.0 0.0 0.0 47.59250301305293 5.686362358410122 5.686362358410122 20.726273693103003 0 0.3054621874040891 2.0 0.0 0.4247425010840047 SY{I|L}{[DS]|[MA]|[CV]|TT}R{[WT]|[RM]}W;S{I|L}Y{[DS]|[MA]|[CV]|TT}R{[WT]|[RM]}W;[VG]ET[PA]YY[WK];{[RE]|[WV]}T[PA]YY[WK] 5.0639;3.3547;0.82543;0.56913 -;-;-;- 138 + 1 1.493 92654.0 1.0 3161 5197 8342 HBL1_DMSO_200M_050219_1,8360 HBL1_DMSO_200M_050219_1,8360,SYYGRDRSPL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8361 44.097 800.0 101420.0 25 0 21353.0 -1 0 52 1103.1403090031945 3306.399097609784 3 1103.474414050579 MULTI CID FTMS 0 0 0 8342 179546.53125 1.0 0 0.0 19 3 E 1 -1 4.6041 0.0 0.0 0.13925 0.0 0.0 2650.169426623604 524.1653536432249 3174.334780266829 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.13925 - 8 + 1 1.493 72183.6 0.8500000238418579 3162 5197 8342 HBL1_DMSO_200M_050219_1,8361 HBL1_DMSO_200M_050219_1,8361, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8362 44.111 800.0 201040.0 25 0 27548.0 + 22498 LPVQGHAP 8 184 409.7279830618808 817.4414131905617 2 409.7281677126884 MULTI CID FTMS 0 0 0 8342 166390.9375 1.0 0 0.0 20 Unmodified _LPVQGHAP_ REV__ENST00000590803.5_1_16:4774781-4776797:-|nuORF 6.354104778181461 0.7857632046190106 3 {[YD]|[{M(Oxidation (M))|F}M]}{I|L} 3 -1 22.192 0.0 0.0 2.7148 0.0 0.0 0.0 423.2545289955023 423.2545289955023 10.408775719160968 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[YD]|[{M(Oxidation (M))|F}M]}{I|L} 2.7148 - 117 1 1.493 127359.5 0.959999978542328 3163 5197 8342 HBL1_DMSO_200M_050219_1,8362 HBL1_DMSO_200M_050219_1,8362,LPVQGHAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8364 44.116 158.0 462950.0 25 0 35128.0 + 43147 VYPPSAAKM 9 94 482.2517950643245 962.4890371954492 2 482.2526428103447 MULTI CID FTMS 0 0 0 8363 240754.703125 0.5066462482045943 -1 0.1032905578613281 1 Unmodified _VYPPSAAKM_ ENSG00000150907|ENST00000379561|FOXO1 18.1463463914782 0.3454829746528889 3 [YV]PP[QT]KM 8 3 + 41.08 0.0 0.0 4.2681 4.2681 76.71 0.0 0.0 0.0 27.100775082214668 4.525618827129279 4.525618827129279 4.247425010840047 0 0.4247425010840047 2.0 0.0 0.0 [YV]PP[QT]KM;[YV]PM[{I|L}P]{I|L}M;[YV]MP{I|L}P{I|L}M;[YV]PM[{I|L}P]M{I|L};[YV]MP{I|L}PM{I|L};[YV][{I|L}P]MP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]P{I|L}PM{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]P{I|L}{[QS]|[NT]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[YV][{M(Oxidation (M))|F}V][H{I|L}]SV;{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]}RM{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.2681;3.8268;3.6101;3.3311;3.1144;2.817;2.6003;1.6142;1.2088;0.81467 -;-;-;-;-;-;-;-;-;- 362 + 1 1.493 63596.2 1.0 3164 5198 8363 HBL1_DMSO_200M_050219_1,8364 HBL1_DMSO_200M_050219_1,8364,VYPPSAAKM False True VYPPSAAKM 44.115927 482.252642810345 6613040.0 8363.0 ENSG00000150907|ENST00000379561|FOXO1 5.025357246398926 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8365 44.129 767.0 56920.0 25 0 2468.1 + -1 LDMYRVRNQDV 11 81 712.8483764529228 0 712.8483764529228 PEAK CID FTMS 0 0 0 -1 0 2 Oxidation (M) _LDM(Oxidation (M))YRVRNQDV_ REV__ENSG00000113569|ENST00000231498|NUP155;REV__ENST00000515054.1_1_5:37301511-37303501:-|nuORF;REV__nc|ENSG00000113569|O75694-2|NUP155 7.608950283845883 0.472344094183283 3 P 1 -1 6.2371 0.0 0.0 0.4381 0.0 0.0 1191.575813719519 132.0320986383422 1323.607912357861 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P 0.4381 - 51 + 1 1.493 37274.1 1.0 3165 5198 8363 HBL1_DMSO_200M_050219_1,8365 HBL1_DMSO_200M_050219_1,8365,LDMYRVRNQDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8366 44.13 31.0 2409600.0 25 0 700340.0 + 14021 IAGKVAVV 8 92 378.7523888160741 755.4902246989482 2 378.7522765994072 MULTI CID FTMS 0 0 0 8363 1802017.0 0.6703614942335784 -1 0.1032905578613281 3 Unmodified _IAGKVAVV_ ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF;nc|ENSG00000101444|P23526-2|AHCY 26.34127834903884 0.4900704351052977 3 {I|L}A 2 6 37.959 0.0 0.0 5.0244 0.0 0.0 0.0 568.3505953424436 568.3505953424436 10.48811694922927 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {I|L}A 5.0244 + + 506 + 1 1.493 64113.9 1.0 3166 5198 8363 HBL1_DMSO_200M_050219_1,8366 HBL1_DMSO_200M_050219_1,8366,IAGKVAVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8367 44.132 48.0 1655600.0 25 0 309100.0 + 41739 VPTDPPRTI 9 73 498.2796454378588 994.5447379425176 2 498.2797119021416 MULTI CID FTMS 0 0 0 8363 1056041.125 0.0904766670961856 -4 0.3653640747070312 4 Unmodified _VPTDPPRTI_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 55.50274090549119 0.0285720310785888 3 VPTDPP 6 3 78.053 0.0 0.0 7.8481 0.0 0.0 0.0 385.2195528619751 385.2195528619751 51.12904104171733 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.8494850021680094 0.0 + VPTDPP 7.8481 + + 264 + 1 1.493 67031.6 1.0 3167 5198 8363 HBL1_DMSO_200M_050219_1,8367 HBL1_DMSO_200M_050219_1,8367,VPTDPPRTI True True VPTDPPRTI 44.131666 498.279711902142 438877600.0 8363.0 ENSG00000132004|ENST00000393261|FBXW9;;nc|ENSG00000132004|Q5XUX1-2|FBXW9 5.657273292541504 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8368 44.135 151.0 659990.0 25 0 103300.0 30255 QYDYCNSWS 9 123 583.2178697454879 1164.4211865577756 2 583.2178832888603 MULTI CID FTMS 0 0 0 8363 670306.9375 0.8993611924898818 -1 0.1032905578613281 5 Unmodified _QYDYCNSWS_ ENSG00000240053|ENST00000375864|LY6G5B;nc|ENSG00000240053|Q8NDX9-2|LY6G5B 8.155526934196011 0.6299788542272896 3 [YQ]{I|L}DQ 5 7 39.952 0.0 0.0 3.4311 0.0 0.0 0.0 514.1068304388881 514.1068304388881 19.916440611282624 0.0 0.0 0.0 0 0.8807196863200843 0.9208187539523752 0.0 0.75 [YQ]{I|L}DQ 3.4311 - 382 1 1.493 74769.0 1.0 3168 5198 8363 HBL1_DMSO_200M_050219_1,8368 HBL1_DMSO_200M_050219_1,8368,QYDYCNSWS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8369 44.136 48.0 1282600.0 25 0 92159.0 -1 0 98 561.325246855985 560.317970389385 1 561.3236572146416 MULTI CID FTMS 0 0 0 8363 662289.125 0.7387309747577515 -1 0.1032905578613281 6 3 [{I|L}T]NT{I|L} 5 -1 + 62.171 0.0 0.0 11.096 11.096 93.999 0.0 0.0 0.0 16.33842148482912 14.51544993495972 14.51544993495972 8.57840941039747 0 0.7742275032520141 2.0 0.4978499570595206 0.3252574989159953 [{I|L}T]NT{I|L};[{I|L}T]QS{I|L};[{I|L}T]GGT{I|L};{[QS]|[NT]}{I|L}T{I|L};[{I|L}T][AG]S{I|L};[Q{I|L}]ST{I|L};[Q{I|L}]TS{I|L} 11.096;9.5647;8.8122;8.1798;7.8617;5.4539;3.9229 -;-;-;-;-;-;- 92 1 1.493 51054.9 1.0 3169 5198 8363 HBL1_DMSO_200M_050219_1,8369 HBL1_DMSO_200M_050219_1,8369, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8370 44.139 131.0 592440.0 25 0 74588.0 + 21789 LPNGKPVSV 9 104 455.771245585233 909.527938237266 2 455.7717162966728 MULTI CID FTMS 0 0 0 8363 478361.4375 0.61730821950567 -1 0.1032905578613281 7 Unmodified _LPNGKPVSV_ CTSC-RAB38|1|fusion;CTSC-RAB38|2|fusion;ENSG00000123892|ENST00000243662|RAB38 56.17704186161178 0.0281986971544335 3 {I|L}PNGK[VP]SV 9 0 + 74.012 0.0 0.0 8.1374 8.1374 93.362 0.0 0.0 0.0 52.91447825603967 12.587418566968154 12.587418566968154 9.208187539523747 0 0.3807196863200844 1.6989700043360187 0.9916440611282626 0.4247425010840047 + + {I|L}PNGK[VP]SV;{I|L}PGGGK[VP]SV;{I|L}PNGK[{I|L}T]AP;{I|L}PW{I|L}[VP]SV;{I|L}PGGGK[{I|L}T]AP;{I|L}PW{I|L}[{I|L}T]AP;{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]}H{I|L}SV 8.1374;7.125;6.0905;5.966;5.078;3.9191;3.8842 +;-;-;-;-;-;- + 329 + 1 1.493 66634.2 1.0 3170 5198 8363 HBL1_DMSO_200M_050219_1,8370 HBL1_DMSO_200M_050219_1,8370,LPNGKPVSV True True LPNGKPVSV 44.138635 455.771716296673 4847259.0 8363.0 CTSC-RAB38|1|fusion;;ENSG00000123892|ENST00000243662|RAB38;;CTSC-RAB38|2|fusion 6.783242384592692 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8371 44.148 544.0 495000.0 25 0 62434.0 + 5599 DNNRSLDLD 9 199 531.2463836830595 1060.478214432919 2 531.2449218630791 MULTI CID FTMS 0 0 0 8363 316304.0625 0.936258882764163 -1 0.1032905578613281 8 Unmodified _DNNRSLDLD_ CON__P04264;CON__P12035;CON__P50446;CON__Q5XQN5;CON__Q6IFZ6;CON__Q7Z794;CON__Q8BGZ7;CON__Q922U2;ENSG00000167768|ENST00000252244|KRT1;ENSG00000186442|ENST00000417996|KRT3;ENSG00000189182|ENST00000341809|KRT77 71.70789743142352 0.0204387454931768 3 {NN|[MP]|[D{I|L}]|[EV]}D{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}D{I|L}D 9 2 + 73.093 0.0 0.0 6.8925 6.8925 83.973 0.0 0.0 0.0 5.917118200384067 14.973024840566474 5.917118200384067 3.188330747580693 0 0.8494850021680094 2.0 0.3494850021680094 1.0010912013506126 {NN|[MP]|[D{I|L}]|[EV]}D{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}D{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}SRNND{I|L}D;{[TV]|[{I|L}S]}DRNND{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}S{I|L}C[PA]D{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}SRGGND{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}SRNGGD{I|L}D;[DN]NRS{I|L}D{I|L}D;{[TV]|[{I|L}S]}DRNGGD{I|L}D;{[TV]|[{I|L}S]}DRGGND{I|L}D;[HM][KC]S{I|L}D{I|L}D 6.8925;6.5918;6.3345;5.8896;5.7235;5.7235;5.4888;5.4662;5.4662;5.3618 -;-;-;-;-;-;+;-;-;- + 2978 1 1.493 205840.7 1.0 3171 5198 8363 HBL1_DMSO_200M_050219_1,8371 HBL1_DMSO_200M_050219_1,8371,DNNRSLDLD True True DNNRSLDLD 44.148202 531.244921863079 2548604.0 8363.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;Q8BGZ7;;ENSG00000186442|ENST00000417996|KRT3;;P12035;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;Q5XQN5;;P50446;;Q6IFZ6;;Q922U2 5.723161697387695 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8372 44.16 670.0 235900.0 25 0 13893.0 -1 NMPTQSLLMYM 11 137 672.8017928623374 0 672.8022338747978 PEAK CID FTMS 0 0 0 8363 200186.359375 1.0 0 0.0 9 Oxidation (M) _NMPTQSLLM(Oxidation (M))YM_ ENSG00000171940|ENST00000371471|ZNF217 15.248480904072842 0.4017935032673427 3 PN{I|L}NADQ 7 -1 57.402 0.0 0.0 4.2723 0.0 0.0 245.0833893649181 343.1370028131469 588.220392178065 0.0 0.0 0.0 0.0 0 0.8296896906561031 0.0 0.0 1.7658715643802767 PN{I|L}NADQ 4.2723 - 754 + 1 1.493 117347.8 1.0 3172 5198 8363 HBL1_DMSO_200M_050219_1,8372 HBL1_DMSO_200M_050219_1,8372,NMPTQSLLMYM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8373 44.171 661.0 236760.0 25 0 40563.0 + 36432 SYYGRDRSPL 10 146 607.3026795251786 0 607.3017455935478 PEAK CID FTMS 0 0 0 8363 192462.125 1.0 0 0.0 10 Unmodified _SYYGRDRSPL_ ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 16.274544907608252 0.3272152626401468 3 R 1 9 10.674 0.0 0.0 0.88025 0.0 0.0 315.181094029229 738.2860481019053 1053.4671421311343 0.0 0.0 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 + R 0.88025 + + 27 + 1 1.493 116904.7 1.0 3173 5198 8363 HBL1_DMSO_200M_050219_1,8373 HBL1_DMSO_200M_050219_1,8373,SYYGRDRSPL False True SYYGRDRSPL 44.171383 607.301745593548 3806966.625 8363.0 ENSG00000173933|ENST00000310092|RBM4;;ENSG00000173914|ENST00000310046|RBM4B;;nc|ENSG00000239306|Q96PK6-5|RBM14 7.428477128346761 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8374 44.185 760.0 403490.0 25 0 84094.0 + 32967 SELVKINGA 9 220 465.7661963290507 929.5178397249014 2 465.7664062380791 MULTI CID FTMS 0 0 0 8363 190130.96875 0.6676899355815765 -1 0.1032905578613281 11 Unmodified _SELVKINGA_ REV__ENST00000399075.6_1_4:120219332-120219395:-|nuORF 41.8396318013385 0.0653578398400075 3 GV{I|L}SE{I|L}NGA 9 -1 37.434 0.0 0.0 4.0272 0.0 0.0 71.07429701972812 0.0 71.07429701972812 0.0 17.61105327259728 0.0 0.0 0 0.6718851356388091 0.0 0.9489700043360187 0.0 GV{I|L}SE{I|L}NGA 4.0272 - 902 1 1.493 232840.2 1.0 3174 5198 8363 HBL1_DMSO_200M_050219_1,8374 HBL1_DMSO_200M_050219_1,8374,SELVKINGA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8375 44.197 628.0 151070.0 25 0 5981.7 + -1 AGNAYWCERM 10 141 629.2599167355243 1256.5052805378484 2 629.7616454958916 MULTI CID FTMS 0 0 0 8363 130349.015625 0.7744037322858357 -1 0.1032905578613281 12 Carbamidomethyl (C) _AGNAYWC(Carbamidomethyl (C))ERM_ REV__ENSG00000106799|ENST00000374994|TGFBR1;REV__ENSG00000123612|ENST00000243349|ACVR1C;REV__ENSG00000135503|ENST00000257963|ACVR1B;REV__nc|ENSG00000106799|P36897-2|TGFBR1;REV__nc|ENSG00000106799|P36897-3|TGFBR1;REV__nc|ENSG00000123612|Q8NER5-2|ACVR1C;REV__nc|ENSG00000123612|Q8NER5-3|ACVR1C;REV__nc|ENSG00000123612|Q8NER5-4|ACVR1C;REV__nc|ENSG00000135503|P36896-4|ACVR1B;REV__nc|ENSG00000135503|P36896-5|ACVR1B 10.823927491677226 0.6659270209832991 3 DEAAGQNA{M(Oxidation (M))|F} 9 -1 64.822 0.0 0.0 5.1589 0.0 0.0 335.1238569437468 0.0 335.1238569437468 0.0 42.31196758040872 0.0 0.0 0 0.9361818737241736 0.0 0.2887254899964357 0.0 DEAAGQNA{M(Oxidation (M))|F} 5.1589 - 1357 1 1.493 76461.5 1.0 3175 5198 8363 HBL1_DMSO_200M_050219_1,8375 HBL1_DMSO_200M_050219_1,8375,AGNAYWCERM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8376 44.211 800.0 280930.0 25 0 26426.0 + 38159 TPPPPGTAI 9 224 425.7369222145446 849.4592914958893 2 425.7373840212822 MULTI CID FTMS 0 0 0 8363 128439.015625 0.1917021334749767 -7 0.4935722351074219 13 Unmodified _TPPPPGTAI_ ENSG00000078900|ENST00000378295|TP73;ENST00000603364.5_1_1:3607439-3646013:+|nuORF;nc|ENSG00000078900|O15350-10|TP73;nc|ENSG00000078900|O15350-11|TP73;nc|ENSG00000078900|O15350-12|TP73;nc|ENSG00000078900|O15350-13|TP73;nc|ENSG00000078900|O15350-2|TP73;nc|ENSG00000078900|O15350-3|TP73;nc|ENSG00000078900|O15350-4|TP73;nc|ENSG00000078900|O15350-5|TP73;nc|ENSG00000078900|O15350-6|TP73;nc|ENSG00000078900|O15350-8|TP73;nc|ENSG00000078900|O15350-9|TP73;TBL1XR1-TP73|1|fusion;TBL1XR1-TP73|2|fusion;TBL1XR1-TP73|3|fusion;TBL1XR1-TP73|4|fusion;TBL1XR1-TP73|5|fusion;TBL1XR1-TP73|6|fusion 77.98433622928108 0.0180125044636492 3 [TP]PGPPTA{I|L} 9 2 + 67.868 0.0 0.0 7.9895 7.9895 85.079 0.0 0.0 0.0 17.47179957273248 50.900324315462726 17.47179957273248 2.4241698815380346 0 0.9247425010840048 1.5228787452803376 2.5545970543767123 0.0 [TP]PGPPTA{I|L};[TP]PPGPTA{I|L};[TP]PGPA[TP]{I|L};{[HG]|PP}TGPPTA{I|L};[TP]PPGA[TP]{I|L};[TP]PQP[TP]{I|L};[TP]PGAP[TP]{I|L};{[HG]|PP}TPGPTA{I|L};{[HG]|PP}GPTPTA{I|L};[TP]PPQ[TP]{I|L} 7.9895;7.7041;5.9168;5.6396;5.6314;5.5822;5.567;5.3543;5.2086;4.9304 -;-;-;-;-;-;-;-;-;- 1804 1 1.493 174186.9 0.9800000190734864 3176 5198 8363 HBL1_DMSO_200M_050219_1,8376 HBL1_DMSO_200M_050219_1,8376,TPPPPGTAI True True TPPPPGTAI 44.210789 425.737384021282 11024374.0 8363.0 nc|ENSG00000078900|O15350-6|TP73;;ENSG00000078900|ENST00000378295|TP73;;nc|ENSG00000078900|O15350-5|TP73;;TBL1XR1-TP73|4|fusion;;nc|ENSG00000078900|O15350-12|TP73;;nc|ENSG00000078900|O15350-11|TP73;;nc|ENSG00000078900|O15350-8|TP73;;nc|ENSG00000078900|O15350-10|TP73;;nc|ENSG00000078900|O15350-9|TP73;;nc|ENSG00000078900|O15350-3|TP73;;nc|ENSG00000078900|O15350-2|TP73;;TBL1XR1-TP73|2|fusion;;TBL1XR1-TP73|5|fusion;;nc|ENSG00000078900|O15350-4|TP73;;ENST00000603364.5_1_1:3607439-3646013:+|nuORF;;TBL1XR1-TP73|6|fusion;;TBL1XR1-TP73|1|fusion;;nc|ENSG00000078900|O15350-13|TP73;;TBL1XR1-TP73|3|fusion 2.1142965157826743 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8378 44.215 2.3 15865000.0 25 0 1874000.0 + 32602 SAVTSVAKV 9 65 431.2554850373836 860.4964171415671 2 431.2559081912041 MULTI CID FTMS 0 0 0 8377 17006832.0 0.2022042538288521 2 -0.1619529724121093 1 Unmodified _SAVTSVAKV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 36.506200033944 0.094635877243972 3 {[SA]|[TG]}VTSVAKV 9 0 + 74.057 0.0 0.0 8.6063 8.6063 97.394 0.0 0.0 0.0 55.26284461280693 9.07831620036704 9.07831620036704 26.46591250700361 0 1.174742501084005 2.0 0.0 0.0 + + {[SA]|[TG]}VTSVAKV;{[SA]|[TG]}V{[WT]|[RM]}AKV;{[SA]|[TG]}{[WT]|[RM]}VAKV 8.6063;5.5307;5.1527 +;-;- + 90 + 1 1.494 36103.6 1.0 3177 5199 8377 HBL1_DMSO_200M_050219_1,8378 HBL1_DMSO_200M_050219_1,8378,SAVTSVAKV True True SAVTSVAKV 44.215039 431.255908191204 938781824.0 8377.0 nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27 7.3899227778116865 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8379 44.216 2.7 16011000.0 25 0 924420.0 + -1 GVVTDMFTAI 10 73 535.2672412003147 1068.5199294674294 2 535.2679321169853 MULTI CID FTMS 0 0 0 8377 17743802.0 0.5490767584701234 1 -0.0614547729492187 2 Oxidation (M) _GVVTDM(Oxidation (M))FTAI_ REV__ENSG00000164659|ENST00000450689|ELAPOR2 20.453626601364224 0.5043500229302764 3 QDT[WK]A{I|L} 7 -1 49.073 0.0 0.0 4.5926 0.0 0.0 208.08903454731063 0.0 208.08903454731063 0.0 38.1035759416632 0.0 0.0 0 2.1237125054200234 0.0 0.0 0.0 QDT[WK]A{I|L} 4.5926 - 78 + 1 1.494 37153.8 1.0 3178 5199 8377 HBL1_DMSO_200M_050219_1,8379 HBL1_DMSO_200M_050219_1,8379,GVVTDMFTAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8380 44.217 5.1 9149600.0 25 0 2183200.0 + 13999 IAARNVIA 8 65 414.2584065769845 826.502260220769 2 414.2584411501884 MULTI CID FTMS 0 0 0 8377 11104917.0 0.6194841234599526 -2 0.2032661437988281 3 Unmodified _IAARNVIA_ REV__L1MA6_dup169|chr1:157530941-157532123:+|1.863022366218344|0.2573555311713708|2.86|46.0|68|2|anti-sense 38.15118350030904 0.2652218139009398 3 {I|L}AA 3 -1 50.445 0.0 0.0 6.1035 0.0 0.0 0.0 568.3212984674436 568.3212984674436 30.91203742573562 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}AA 6.1035 + + 31 + 1 1.494 41423.0 1.0 3179 5199 8377 HBL1_DMSO_200M_050219_1,8380 HBL1_DMSO_200M_050219_1,8380,IAARNVIA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8381 44.219 13.0 3400300.0 25 0 301340.0 + + -1 TPYGRPANI 9 66 493.7611976080659 985.5078422829318 2 494.7641784548759 MULTI CID FTMS 0 0 0 8377 3947548.75 0.6025965829417586 5 -0.42694091796875 4 Oxidation (M) _M(Oxidation (M))LTGHLWI_ nc|ENSG00000174485|Q7Z401|DENND4A;ENST00000568515.1_1_15:66007788-66048788:-|nuORF;ENSG00000174485|ENST00000443035|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A 10.183394434864962 0.7604730176254005 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RP]{I|L}{M(Oxidation (M))|F}{[HG]|PP} 8 -1 + 36.387 0.0 0.0 3.6923 3.6923 82.216 0.0 0.0 0.0 13.051987963624107 0.4014429721864587 0.4014429721864587 13.051987963624107 0 0.2742275032520141 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RP]{I|L}{M(Oxidation (M))|F}{[HG]|PP};[TP]KS{[NV]|[RG]}{M(Oxidation (M))|F}{[HG]|PP} 3.6923;2.3679 -;- 57 1 1.494 38322.7 1.0 3180 5199 8377 HBL1_DMSO_200M_050219_1,8381 HBL1_DMSO_200M_050219_1,8381,MLTGHLWI False False TPYGRPANI 44.218576 494.764178454876 68773368.0 8377.0 nc|ENSG00000174485|Q7Z401|DENND4A;;ENST00000568515.1_1_15:66007788-66048788:-|nuORF;;ENSG00000174485|ENST00000443035|DENND4A;;nc|ENSG00000174485|Q7Z401-2|DENND4A 6.036588350931804 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8382 44.22 16.0 3321700.0 25 0 543090.0 + 45849 YYQDTPKQI 9 76 578.2874516896823 1154.5603504461644 2 578.2877685427666 MULTI CID FTMS 0 0 0 8377 3244710.75 0.3426019830662454 -2 0.2032661437988281 5 Unmodified _YYQDTPKQI_ ENSG00000048162|ENST00000614830|NOP16 53.832793166522166 0.0319663582346103 3 YYQDTPKQ{I|L} 9 0 + 67.786 0.0 0.0 5.8711 5.8711 87.354 0.0 0.0 0.0 51.79136485106336 10.825741211207088 10.825741211207088 9.208187539523747 0 0.7742275032520141 2.0 0.3807196863200844 1.25 + + YYQDTPKQ{I|L};YY[AG]DTPKQ{I|L};YYQDTPK[AG]{I|L};YY[AG]DTPK[AG]{I|L};[KP]Q{[ES]|[DT]|[{I|L}C]}[Q{I|L}]YY 5.8711;5.0736;4.7919;3.9981;0.87671 +;-;-;-;- + 149 + 1 1.494 46161.1 1.0 3181 5199 8377 HBL1_DMSO_200M_050219_1,8382 HBL1_DMSO_200M_050219_1,8382,YYQDTPKQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8383 44.221 22.0 2370300.0 25 0 279320.0 + 24951 MPPPPPQGV 9 86 460.2385793050109 918.462605676822 2 460.2390014529228 MULTI CID FTMS 0 0 0 8377 2686374.5 0.0892382184767917 -24 1.87591552734375 6 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 32.116972079565 0.1225432171549407 3 [DP][RK][{M(Oxidation (M))|F}T]GV 8 6 + 36.968 0.0 0.0 4.025 4.025 83.669 0.0 0.0 0.0 22.878169188326616 0.0 0.0 16.020599913279625 0 0.7302046884880937 2.0 0.0 0.0 [DP][RK][{M(Oxidation (M))|F}T]GV;{[HG]|PP}MP[RK]{[HG]|PP} 4.025;2.2807 -;- 215 + 1 1.494 45306.3 1.0 3182 5199 8377 HBL1_DMSO_200M_050219_1,8383 HBL1_DMSO_200M_050219_1,8383,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8384 44.222 24.0 1752200.0 25 0 266880.0 7478 EGSSFQMFSS 10 68 553.724360109036 1105.4341672848718 2 553.7250854372978 MULTI CID FTMS 0 0 0 8377 2044480.625 0.5108372162868291 6 -0.4436759948730469 7 Unmodified _EGSSFQMFSS_ ENSG00000163975|ENST00000296350|MELTF 13.042465956692816 0.6287021003332052 3 YYGSQ{M(Oxidation (M))|F} 6 7 54.799 0.0 0.0 4.9572 0.0 0.0 0.0 357.15399085348434 357.15399085348434 39.31417813229345 0.0 0.0 0.0 0 0.5 2.0 0.6861818737241735 0.3807196863200844 YYGSQ{M(Oxidation (M))|F} 4.9572 - 119 1 1.494 38695.3 1.0 3183 5199 8377 HBL1_DMSO_200M_050219_1,8384 HBL1_DMSO_200M_050219_1,8384,EGSSFQMFSS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8385 44.223 38.0 1092800.0 25 0 161870.0 -1 CHCTGSSSF 9 69 521.6910799804567 1041.3676070277131 2 521.6915771365166 MULTI CID FTMS 0 0 0 8377 1818744.5 1.0 0 0.0 8 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))HC(Carbamidomethyl (C))TGSSSF_ ENST00000366857.9_1_1:224553599-224563498:+|nuORF 16.942295170755138 0.3780752226737986 3 S{M(Oxidation (M))|F} 2 -1 29.464 0.0 0.0 2.8294 0.0 0.0 789.2560651294115 0.0 789.2560651294115 0.0 15.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 S{M(Oxidation (M))|F} 2.8294 + + 31 + 1 1.494 39826.1 1.0 3184 5199 8377 HBL1_DMSO_200M_050219_1,8385 HBL1_DMSO_200M_050219_1,8385,CHCTGSSSF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8386 44.224 37.0 628830.0 25 0 138150.0 -1 YQAMACYDQN 10 34 611.7283339090752 1221.4421148849503 2 611.7289916872978 MULTI CID FTMS 0 0 0 8377 1513367.375 0.4904249782513837 1 -0.0614547729492187 9 Oxidation (M) _YQAM(Oxidation (M))ACYDQN_ ENSG00000005108|ENST00000423059|THSD7A 3.5964929083625545 0.7100006075494749 3 N 1 -1 13.979 0.0 0.0 1.1445 0.0 0.0 1089.3882036074097 0.0 1089.3882036074097 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 N 1.1445 + + 17 + 1 1.494 25339.5 1.0 3185 5199 8377 HBL1_DMSO_200M_050219_1,8386 HBL1_DMSO_200M_050219_1,8386,YQAMACYDQN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8387 44.226 39.0 1080800.0 25 0 180580.0 + 30308 QYYNGKIHAY 10 74 419.5399367559342 1255.5979808680029 3 419.5400268435478 MULTI CID FTMS 0 0 0 8377 1127897.75 1.0 0 0.0 10 Unmodified _QYYNGKIHAY_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000493271.1_1_2:96945134-96947649:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 34.93206674587334 0.2110832994570416 3 [YQ]YN[KG]{I|L}HAY 10 0 + 34.9 0.0 0.0 2.7795 2.7795 77.859 0.0 0.0 0.0 5.764837301042718 13.399480616943508 5.764837301042718 9.164539485499253 0 0.0 0.0 0.0 0.3807196863200844 + + [YQ]YN[KG]{I|L}HAY;[YQ]YGG[KG]{I|L}HAY;[YQ]Y[W{I|L}]{I|L}HAY;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KT][KG]NY{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KT][W{I|L}]Y{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{M(Oxidation (M))|F}V][KQ][KG]NY{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{M(Oxidation (M))|F}V][KQ][W{I|L}]Y{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YN][KP][KG]NY{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.7795;2.0496;1.9561;1.7123;1.1921;1.0323;0.51205;0.31304 +;-;-;-;-;-;-;- + 129 + 1 1.494 39089.1 1.0 3186 5199 8377 HBL1_DMSO_200M_050219_1,8387 HBL1_DMSO_200M_050219_1,8387,QYYNGKIHAY False True QYYNGKIHAY 44.225647 419.540026843548 3851835.0 8377.0 ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENST00000493271.1_1_2:96945134-96947649:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 8.072911580403646 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8388 44.232 339.0 631860.0 25 0 42264.0 -1 0 83 877.0044321816987 4379.985778575493 5 877.6070434451103 MULTI CID FTMS 0 0 0 8377 844814.25 1.0 0 0.0 11 3 AASA 4 -1 21.938 0.0 0.0 0.50087 0.0 0.0 584.133715641265 3492.6773034085627 4076.811019049828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AASA 0.50087 - 158 + 1 1.494 151870.4 1.0 3187 5199 8377 HBL1_DMSO_200M_050219_1,8388 HBL1_DMSO_200M_050219_1,8388, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8389 44.233 66.0 375430.0 25 0 31166.0 + 33859 SLEWSTPFI 9 47 540.2724112047138 1078.5302694762274 2 540.2725707888603 MULTI CID FTMS 0 0 0 8377 686213.9375 0.2778987834379415 3 -0.2514152526855469 12 Unmodified _SLEWSTPFI_ REV__ENSG00000118242|ENST00000263268|MREG;REV__nc|ENSG00000118242|Q8N565-2|MREG 7.910154910731844 0.6385446671287552 3 P{M(Oxidation (M))|F}{I|L} 3 -1 14.309 0.0 0.0 1.3267 0.0 0.0 703.3135774369681 0.0 703.3135774369681 0.0 11.210149894766705 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.0 P{M(Oxidation (M))|F}{I|L} 1.3267 + + 11 + 1 1.494 30598.3 1.0 3188 5199 8377 HBL1_DMSO_200M_050219_1,8389 HBL1_DMSO_200M_050219_1,8389,SLEWSTPFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8390 44.236 112.0 560920.0 25 0 89923.0 40559 VKFVVLRK 8 93 330.22683503294127 0 330.2260925173759 PEAK CID FTMS 0 0 0 8377 620446.9375 1.0 0 0.0 13 Unmodified _VKFVVLRK_ ENSG00000198944|ENST00000378693|SOWAHA 6.2057823575117 0.5769469700303246 3 CV 2 7 9.9485 0.0 0.0 1.5109 0.0 0.0 328.27390824772004 125.07236658267811 453.34627483039816 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 CV 1.5109 - 22 + 1 1.494 57059.6 1.0 3189 5199 8377 HBL1_DMSO_200M_050219_1,8390 HBL1_DMSO_200M_050219_1,8390,VKFVVLRK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8391 44.237 52.0 518120.0 25 0 45091.0 + 14243 IDYDGREVL 9 64 360.5174059707423 1078.530388512427 3 360.5171386599541 MULTI CID FTMS 0 0 0 8377 577305.5625 0.2613584635095399 4 -0.3445549011230469 14 Unmodified _IDYDGREVL_ REV__ENSG00000006715|ENST00000310301|VPS41;REV__nc|ENSG00000006715|P49754-2|VPS41;REV__nc|ENSG00000006715|P49754-3|VPS41 7.910154910731844 0.6385446671287552 3 {I|L} 1 -1 11.99 0.0 0.0 1.1117 0.0 0.0 947.4353242807848 0.0 947.4353242807848 0.0 4.005149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1117 + + 16 + 1 1.494 32916.7 1.0 3190 5199 8377 HBL1_DMSO_200M_050219_1,8391 HBL1_DMSO_200M_050219_1,8391,IDYDGREVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8392 44.24 153.0 331490.0 25 0 21766.0 + 16397 IYQSKVREL 9 83 568.3269002633236 1134.6392475934472 2 568.3276244997978 MULTI CID FTMS 0 0 0 8377 538652.8125 0.021978198609903 10 -0.8312606811523438 15 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 18.373094154950223 0.3393451798331396 3 {I|L}YQSKV 6 3 54.117 0.0 0.0 4.7696 0.0 0.0 0.0 413.21787439517817 413.21787439517817 47.1277502416482 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}YQSKV 4.7696 + + 106 + 1 1.494 43999.6 1.0 3191 5199 8377 HBL1_DMSO_200M_050219_1,8392 HBL1_DMSO_200M_050219_1,8392,IYQSKVREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8393 44.242 65.0 510500.0 25 0 46854.0 + 13176 HFVQLPRE 8 75 342.52199459982626 1024.5441543996787 3 342.5220519900322 MULTI CID FTMS 0 0 0 8377 539269.9375 1.0 0 0.0 16 Unmodified _HFVQLPRE_ REV__ENSG00000204963|ENST00000525929|PCDHA7;REV__nc|ENSG00000204963|Q9UN72-2|PCDHA7 5.230669730166228 0.792582437072536 3 R 1 -1 2.7642 0.0 0.0 0.2698 0.0 0.0 682.4522487373725 182.9641054742797 865.4163542116522 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.2698 + + 10 + 1 1.494 32519.7 1.0 3192 5199 8377 HBL1_DMSO_200M_050219_1,8393 HBL1_DMSO_200M_050219_1,8393,HFVQLPRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8394 44.244 89.0 401770.0 25 0 35482.0 8962 FANLYIVIP 9 73 350.53775673560176 1048.5914408070053 3 350.5377075076103 MULTI CID FTMS 0 0 0 8377 517032.46875 1.0 0 0.0 17 Unmodified _FANLYIVIP_ ENSG00000181616|ENST00000322653|OR52H1 5.230669730166228 0.7320841359114558 3 KE{I|L}[WQ] 5 8 14.983 0.0 0.0 1.4288 0.0 0.0 346.22224623847814 0.0 346.22224623847814 0.0 4.70511070020331 0.0 0.0 0 0.0 0.0 0.0 0.0 KE{I|L}[WQ] 1.4288 - 32 1 1.494 36989.9 1.0 3193 5199 8377 HBL1_DMSO_200M_050219_1,8394 HBL1_DMSO_200M_050219_1,8394,FANLYIVIP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8395 44.252 450.0 245710.0 25 0 21980.0 + -1 TDTNMENCPT 10 117 591.725265343485 1181.43597775377 2 591.7256957888603 MULTI CID FTMS 0 0 0 8377 399959.25 0.2862518037937596 -2 0.2032661437988281 18 Carbamidomethyl (C) _TDTNMENC(Carbamidomethyl (C))PT_ REV__ENSG00000215440|ENST00000356091|NPEPL1;REV__ENST00000527587.5_1_20:57268807-57288710:+|nuORF;REV__ENST00000529976.5_1_20:57268807-57287813:+|nuORF;REV__ENST00000530122.1_1_20:57266543-57280604:+|nuORF;REV__nc|ENSG00000215440|Q8NDH3-2|NPEPL1;REV__nc|ENSG00000215440|Q8NDH3-3|NPEPL1;REV__nc|ENSG00000215440|Q8NDH3-4|NPEPL1;REV__nc|ENSG00000215440|Q8NDH3-5|NPEPL1 19.256988751693697 0.5244284437930726 3 SE 2 -1 18.513 0.0 0.0 1.567 0.0 0.0 374.1940476774012 588.1273897760374 962.3214374534386 0.0 0.0 0.0 0.0 0 0.555462187404089 0.0 0.5 0.0 SE 1.567 - 324 + 1 1.494 88489.0 1.0 3194 5199 8377 HBL1_DMSO_200M_050219_1,8395 HBL1_DMSO_200M_050219_1,8395,TDTNMENCPT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8396 44.262 609.0 194480.0 25 0 11750.0 + -1 IHCYARQCYYQ 11 116 781.3370276144578 1560.6595022957156 2 781.3381835818291 MULTI CID FTMS 0 0 0 8377 266954.65625 1.0 0 0.0 19 2 Carbamidomethyl (C) _IHC(Carbamidomethyl (C))YARQC(Carbamidomethyl (C))YYQ_ REV__ENSG00000165416|ENST00000310528|SUGT1;REV__ENST00000607588.1_1_13:52743381-52745380:-|nuORF;REV__nc|ENSG00000165416|Q9Y2Z0|SUGT1 17.11289562659939 0.6791789249425932 3 Y{M(Oxidation (M))|F}ANQQAEMWQ 11 -1 87.275 0.0 0.0 5.5922 0.0 0.0 146.09256001231557 0.0 146.09256001231557 0.0 76.67882293942957 0.0 0.0 0 0.8807196863200843 0.0 0.0 1.579689690656103 Y{M(Oxidation (M))|F}ANQQAEMWQ 5.5922 - 1822 + 1 1.494 84505.8 1.0 3195 5199 8377 HBL1_DMSO_200M_050219_1,8396 HBL1_DMSO_200M_050219_1,8396,IHCYARQCYYQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8397 44.272 550.0 472570.0 25 0 45963.0 -1 PLTCPHNSCV 10 146 564.251014205408 1126.4874754776158 2 564.2519409060478 MULTI CID FTMS 0 0 0 8377 253526.703125 0.0482425534472619 -3 0.2982902526855469 20 Carbamidomethyl (C) _PLTC(Carbamidomethyl (C))PHNSCV_ ENSG00000283536|ENST00000635789|unknown 14.838274106304384 0.5985701837916485 3 VSSVT[DN]D 8 -1 49.311 0.0 0.0 4.3775 0.0 0.0 221.0865754051657 85.03002344302968 306.11659884819534 0.0 0.0 0.0 0.0 0 0.5 0.0 2.916386562212267 0.0 VSSVT[DN]D 4.3775 - 1393 + 1 1.494 195229.1 1.0 3196 5199 8377 HBL1_DMSO_200M_050219_1,8397 HBL1_DMSO_200M_050219_1,8397,PLTCPHNSCV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8399 44.287 723.0 235070.0 25 0 21867.0 + 7463 EGPRDTKLI 9 172 514.7898997407084 1027.5652465482167 2 514.7896606326103 MULTI CID FTMS 0 0 0 8398 96620.546875 0.4304528072434123 1 -0.1004981994628906 1 Unmodified _EGPRDTKLI_ ENSG00000149639|ENST00000237536|SOGA1;nc|ENSG00000149639|O94964-1|MTCL2;nc|ENSG00000149639|O94964-4|MTCL2 39.21299971606389 0.0797768173001226 3 {NN|[MP]|[D{I|L}]|[EV]}YYTK{I|L}{I|L} 8 4 + 51.547 0.0 0.0 5.0164 5.0164 83.043 0.0 0.0 0.0 3.282735463467681 26.86745458778393 3.282735463467681 8.433181346311464 0 1.035666875892183 0.958607314841775 1.6989700043360187 0.0 {NN|[MP]|[D{I|L}]|[EV]}YYTK{I|L}{I|L};[{I|L}A]N[W{I|L}]GE{I|L}{I|L};[{I|L}A]N[TP]TGE{I|L}{I|L};{[VA]|[{I|L}G]}Q[W{I|L}]GE{I|L}{I|L};{[VA]|[{I|L}G]}Q[TP]TGE{I|L}{I|L};[{I|L}A]N[TP]TW{I|L}{I|L};{[VA]|[{I|L}G]}Q[TP]TW{I|L}{I|L};[VG]AA[W{I|L}]GE{I|L}{I|L};[VG]AA[TP]TGE{I|L}{I|L};[VG]{I|L}G[RD]GE{I|L}{I|L} 5.0164;4.1957;4.1512;4.0365;3.992;3.9798;3.8206;3.7989;3.7587;3.6294 -;-;-;-;-;-;-;-;-;- 1141 1 1.494 131998.3 1.0 3197 5200 8398 HBL1_DMSO_200M_050219_1,8399 HBL1_DMSO_200M_050219_1,8399,EGPRDTKLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8400 44.29 191.0 526710.0 25 0 65302.0 21316 LPESSRGLV 9 99 479.271824048722 956.529095164244 2 479.2713500857353 MULTI CID FTMS 0 0 0 8398 368708.09375 0.1312306963287087 -5 0.4215011596679687 2 Unmodified _LPESSRGLV_ ENST00000590866.2_1_19:1358969-1359134:+|nuORF 43.77239144664712 0.0547478964384323 3 {I|L}PESS 5 4 69.851 0.0 0.0 7.3026 0.0 0.0 0.0 440.26300989322505 440.26300989322505 39.797210635437935 0.0 0.0 0.0 0 0.7742275032520141 1.5228787452803376 1.1307196863200843 0.0 + {I|L}PESS 7.3026 + + 158 + 1 1.494 81066.6 1.0 3198 5200 8398 HBL1_DMSO_200M_050219_1,8400 HBL1_DMSO_200M_050219_1,8400,LPESSRGLV True True IPESSGRIV 44.29047 479.271350085735 122522208.0 8398.0 nc|ENSG00000101096|Q13469|NFATC2;;nc|ENSG00000101096|Q13469-5|NFATC2;;nc|ENSG00000101096|Q13469-4|NFATC2;;ENSG00000101096|ENST00000371564|NFATC2;;nc|ENSG00000101096|Q13469-3|NFATC2 3.333054224650065 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8401 44.304 800.0 417700.0 25 0 56752.0 + 11523 GIPEKDLHSV 10 233 365.5330099272893 1093.5772003820678 3 365.5325805544853 MULTI CID FTMS 0 0 0 8398 218304.609375 0.189472198601381 -2 0.1614303588867187 3 Unmodified _GIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 88.95385435242217 0.009729780394035 3 {[VA]|[{I|L}G]}PEKD{I|L}HSV 10 0 + 72.516 0.0 0.0 6.6311 6.6311 84.079 0.0 0.0 0.0 23.877306775338752 3.894688355842448 3.894688355842448 3.894688355842448 0 0.3807196863200844 2.0 2.353917193908117 0.0 + + {[VA]|[{I|L}G]}PEKD{I|L}HSV;{[VA]|[{I|L}G]}PEKD{I|L}HVS;{[VA]|[{I|L}G]}PEKD{I|L}VHS;{[VA]|[{I|L}G]}VP{[SA]|[TG]}D{I|L}HSV;{[VA]|[{I|L}G]}PEV[SG]{I|L}HSV;{[VA]|[{I|L}G]}PV{[SA]|[TG]}D{I|L}HSV;{[VA]|[{I|L}G]}VP{[SA]|[TG]}D{I|L}HVS;{[VA]|[{I|L}G]}VPE[SG]{I|L}HSV;{[VA]|[{I|L}G]}PEV[SG]{I|L}HVS;{[VA]|[{I|L}G]}PV{[SA]|[TG]}D{I|L}HVS 6.6311;6.2749;5.6004;5.4722;5.2448;5.1736;5.1161;4.924;4.8887;4.8174 +;-;-;-;-;-;-;-;-;- + 5834 + 1 1.494 277416.3 0.8899999856948853 3199 5200 8398 HBL1_DMSO_200M_050219_1,8401 HBL1_DMSO_200M_050219_1,8401,GIPEKDLHSV True True GIPEKDLHSV 44.304284 365.532580554485 34961862.0 8398.0 ENST00000606952.5_1_1:156203463-156206310:+|nuORF;;ENSG00000160783|ENST00000368277|PMF1;;nc|ENSG00000160783|Q6P1K2-2|PMF1;;nc|ENSG00000160783|Q6P1K2-4|PMF1 8.125394821166992 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8402 44.317 748.0 446070.0 25 0 27105.0 + 33232 SFNCLWRGYS 10 172 616.7787446464536 1231.542936359707 2 616.7776367068291 MULTI CID FTMS 0 0 0 8398 187985.859375 0.3433568522310627 -2 0.1614303588867187 4 Unmodified _SFNCLWRGYS_ REV__ENSG00000149639|ENST00000237536|SOGA1;REV__nc|ENSG00000149639|O94964-1|MTCL2;REV__nc|ENSG00000149639|O94964-3|MTCL2 34.40172386719151 0.2166836008404837 3 [QP]YTGPMNK 9 -1 55.472 0.0 0.0 4.5042 0.0 0.0 0.0 212.0316008324532 212.0316008324532 0.6624150610507868 0.0 0.0 0.0 0 0.468765315847925 0.744727494896694 0.6109243748081782 1.3609243748081783 [QP]YTGPMNK 4.5042 - 10081 1 1.494 241987.7 1.0 3200 5200 8398 HBL1_DMSO_200M_050219_1,8402 HBL1_DMSO_200M_050219_1,8402,SFNCLWRGYS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8403 44.331 800.0 244950.0 25 0 13214.0 30270 QYMKEYQDAF 10 157 661.7909110307941 1321.567269128388 2 661.7913085818291 MULTI CID FTMS 0 0 0 8398 155205.84375 0.4826318733387804 -1 0.0614547729492187 5 Unmodified _QYMKEYQDAF_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 19.256988751693697 0.5244284437930726 3 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F} 13 7 + 115.25 0.0 0.0 8.7204 8.7204 88.268 0.0 0.0 0.0 7.71505167644483 16.642078980768062 7.71505167644483 3.701850833128858 0 1.1307196863200843 1.3979400086720375 0.6307196863200843 2.443672679568534 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GWSEAQQNA{M(Oxidation (M))|F};[AG]NA{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F};[AG]GGA{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F};[AG]GGWSEAQQNA{M(Oxidation (M))|F} 8.7204;8.4403;8.1366;8.0339;8.0339;8.0339;7.9533;7.9211;7.914;7.8852 -;-;-;-;-;-;-;-;-;- 7772 1 1.494 143861.5 0.9700000286102296 3201 5200 8398 HBL1_DMSO_200M_050219_1,8403 HBL1_DMSO_200M_050219_1,8403,QYMKEYQDAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8404 44.335 216.0 177200.0 25 0 9734.2 + 30309 QYYNGKIHAY 10 76 628.8063608421639 1255.5981687511278 2 628.8060790896416 MULTI CID FTMS 0 0 0 8398 150755.65625 0.7022160387607546 1 -0.1004981994628906 6 Unmodified _QYYNGKIHAY_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000493271.1_1_2:96945134-96947649:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 6.630372943996041 0.695967137280542 3 NQQAED[WM] 8 10 42.256 0.0 0.0 3.3654 0.0 0.0 235.21152431929028 0.0 235.21152431929028 0.0 23.46137085982516 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 NQQAED[WM] 3.3654 - 168 + 1 1.494 35224.7 1.0 3202 5200 8398 HBL1_DMSO_200M_050219_1,8404 HBL1_DMSO_200M_050219_1,8404,QYYNGKIHAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8405 44.349 800.0 145150.0 25 0 27798.0 + 45846 YYQCMGNYC 9 134 572.6990687690827 0 572.6984741091728 PEAK CID FTMS 0 0 0 8398 127326.4609375 0.7115554837597061 4 -0.3654861450195312 7 Unmodified _YYQCMGNYC_ REV__ENSG00000168615|ENST00000487273|ADAM9;REV__nc|ENSG00000168615|Q13443-2|ADAM9 12.531546534597751 0.2832320739326029 3 YY 2 -1 14.024 0.0 0.0 1.2265 0.0 0.0 163.06433673170187 651.1668795221311 814.231216253833 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 YY 1.2265 + + 48 + 1 1.494 90115.7 0.9200000166893004 3203 5200 8398 HBL1_DMSO_200M_050219_1,8405 HBL1_DMSO_200M_050219_1,8405,YYQCMGNYC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8406 44.353 97.0 665430.0 25 0 61620.0 + 45468 YTIPPGHQV 9 96 506.2657893940363 1010.5170258548726 2 506.2650329470634 MULTI CID FTMS 0 0 0 8398 124366.453125 0.2722857420635053 -7 0.5426292419433594 8 Unmodified _YTIPPGHQV_ ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;ENST00000492267.1_1_3:82855892-82856129:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1 21.74664581756881 0.2544899275067181 3 [{M(Oxidation (M))|F}V]{I|L}{M(Oxidation (M))|F} 4 8 18.639 0.0 0.0 1.8445 0.0 0.0 0.0 501.24823248012575 501.24823248012575 0.4346569378109031 0.0 0.0 0.0 0 0.0 0.721246399047171 0.0 0.0 [{M(Oxidation (M))|F}V]{I|L}{M(Oxidation (M))|F} 1.8445 - 196 1 1.494 57094.0 1.0 3204 5200 8398 HBL1_DMSO_200M_050219_1,8406 HBL1_DMSO_200M_050219_1,8406,YTIPPGHQV False True YTIPPGHQV 44.352574 506.265032947063 15308384.0 8398.0 ENST00000492267.1_1_3:82855892-82856129:-|nuORF;;ENSG00000001630|ENST00000003100|CYP51A1;;nc|ENSG00000001630|Q16850-2|CYP51A1;;ENST00000419457.1_1_13:29296686-29297403:-|nuORF 6.595926443735759 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8407 44.366 800.0 348510.0 25 0 22262.0 + 21991 LPPPGVRKI 9 216 488.81871439729207 975.6228758613842 2 488.8186828494072 MULTI CID FTMS 0 0 0 8398 105102.78125 0.2364726321037555 10 -0.8650550842285156 9 Unmodified _LPPPGVRKI_ ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54566383-54570502:-|nuORF 36.04419817259434 0.0971720506436186 3 {I|L}PPP 4 5 56.687 0.0 0.0 5.8104 0.0 0.0 0.0 568.360677262035 568.360677262035 39.77604879663963 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.0 0.0 + {I|L}PPP 5.8104 + + 1798 + 1 1.494 209364.0 0.6399999856948853 3205 5200 8398 HBL1_DMSO_200M_050219_1,8407 HBL1_DMSO_200M_050219_1,8407,LPPPGVRKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8408 44.373 349.0 441660.0 25 0 45501.0 -1 MNPGYDCLFKL 11 89 679.3166782371993 1356.6188035411983 2 679.3176757693291 MULTI CID FTMS 0 0 0 8398 93754.0 0.1619410855397854 -1 0.0614547729492187 10 Carbamidomethyl (C) _MNPGYDC(Carbamidomethyl (C))LFKL_ nc|ENSG00000233111|Q92928|RAB1C 24.99096001346401 0.505407273373304 3 [MN]PN{I|L}NEAQ 9 -1 101.99 0.0 0.0 7.5181 0.0 0.0 0.0 342.1533044610318 342.1533044610318 49.90861818278692 0.0 0.0 0.0 0 1.066901560044258 1.6989700043360187 0.3054621874040891 2.5158715643802765 [MN]PN{I|L}NEAQ 7.5181 - 2511 + 1 1.494 115189.0 1.0 3206 5200 8398 HBL1_DMSO_200M_050219_1,8408 HBL1_DMSO_200M_050219_1,8408,MNPGYDCLFKL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8410 44.377 15.0 4099400.0 25 0 494020.0 + 22845 LRTVPGSLIN 10 75 357.21692630247696 1068.628949507631 3 357.2167541384697 MULTI CID FTMS 0 0 0 8409 2883450.5 0.2320346679505575 2 -0.1826019287109375 1 Unmodified _LRTVPGSLIN_ REV__ENST00000422972.1_1_22:29214364-29218101:+|nuORF;REV__ENST00000451486.5_1_22:29197956-29218101:+|nuORF;REV__ENST00000458080.1_1_22:29196681-29218101:+|nuORF 16.149105407346934 0.5765757077271437 3 QKS{I|L}HVQ 7 -1 28.677 0.0 0.0 2.6835 0.0 0.0 230.16653701129945 0.0 230.16653701129945 0.0 9.212819689744975 0.0 0.0 0 0.0 0.0 0.5 0.4247425010840047 QKS{I|L}HVQ 2.6835 - 102 + 1 1.494 57170.1 1.0 3207 5201 8409 HBL1_DMSO_200M_050219_1,8410 HBL1_DMSO_200M_050219_1,8410,LRTVPGSLIN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8411 44.379 110.0 504540.0 25 0 36667.0 + 25301 NAFLEKKTV 9 111 525.3030248312219 1048.5914967292438 2 525.3032104372978 MULTI CID FTMS 0 0 0 8409 418880.0625 0.1452850561536647 2 -0.1826019287109375 2 Unmodified _NAFLEKKTV_ ENSG00000196199|ENST00000361479|MPHOSPH8;nc|ENSG00000196199|Q99549-2|MPHOSPH8 28.49450938151212 0.1686335738423394 3 {[QG]|[NA]}{M(Oxidation (M))|F}{I|L}EKKS{I|L} 9 2 + 63.429 0.0 0.0 6.0489 6.0489 78.068 0.0 0.0 0.0 24.13734275855269 1.2963385781668038 1.2963385781668038 1.2963385781668038 0 0.9247425010840048 1.6989700043360187 0.2215141619232908 0.0 {[QG]|[NA]}{M(Oxidation (M))|F}{I|L}EKKS{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}EKKTV 6.0489;5.9253 -;+ + 302 + 1 1.494 52284.6 1.0 3208 5201 8409 HBL1_DMSO_200M_050219_1,8411 HBL1_DMSO_200M_050219_1,8411,NAFLEKKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8412 44.38 13.0 3545900.0 25 0 406700.0 + 2421 AQQPTAVQV 9 76 471.25595438753953 940.4973558418792 2 471.2561828494072 MULTI CID FTMS 0 0 0 8409 4480323.0 0.635317610025213 -1 0.1004981994628906 3 Unmodified _AQQPTAVQV_ ENSG00000066136|ENST00000447388|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 36.12702656103203 0.0967173616627612 3 [TP]AVQ[QA]QV 9 6 + 26.256 0.0 0.0 2.7917 2.7917 66.465 0.0 0.0 0.0 0.9332695411514962 4.529478005380064 0.9332695411514962 0.0269751594335261 0 0.6237125054200234 0.8538719643217619 0.4361818737241735 0.3807196863200844 [TP]AVQ[QA]QV;[TP]AAQQVQV;[AG]VA[TP][QA]QV;[AG]AV[TP][QA]QV;{[QV]|[N{I|L}]|[RA]|[KV]}A[TP][QA]QV;[TP]AV[AG][QA]QV;[QA]V[TP][QA]QV;[TP]AA[VG][QA]QV;{[VA]|[{I|L}G]}[TP]Q[QA]QV;{[VA]|[{I|L}G]}GA[TP][QA]QV 2.7917;2.7888;2.0596;1.7396;1.4919;1.4078;1.2397;0.71327;0.31537;0.28503 -;-;-;-;-;-;-;-;-;- 261 1 1.494 40486.1 1.0 3209 5201 8409 HBL1_DMSO_200M_050219_1,8412 HBL1_DMSO_200M_050219_1,8412,AQQPTAVQV True True AQQPTAVQV 44.380498 471.256182849407 89091312.0 8409.0 ENSG00000066136|ENST00000447388|NFYC;;nc|ENSG00000066136|Q13952|NFYC;;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC;;nc|ENSG00000066136|Q13952-5|NFYC;;ENST00000424419.6_1_1:41157373-41232429:+|nuORF 5.991916974385579 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8413 44.382 24.0 1860100.0 25 0 209770.0 + 36294 SYIKSSSSL 9 82 486.2547317251079 970.4949105170158 2 486.2556030154228 MULTI CID FTMS 0 0 0 8409 1767732.125 1.0 0 0.0 4 Unmodified _SYIKSSSSL_ ENSG00000184661|ENST00000330560|CDCA2 24.020572477871973 0.2255576514309169 3 {[{M(Oxidation (M))|F}C]|[YS]}{I|L}K{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}S{I|L} 8 3 + 25.087 0.0 0.0 2.5849 2.5849 75.578 0.0 0.0 0.0 6.989700043360184 6.709412807357747 6.709412807357747 6.709412807357747 0 0.4247425010840047 0.0 0.3494850021680094 0.0 {[{M(Oxidation (M))|F}C]|[YS]}{I|L}K{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}S{I|L};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CT]|[{M(Oxidation (M))|F}G]};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}K{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}TV;{[QD]|[EN]|[WG]|[KD]|[RS]}[HV]K{I|L}[MT];[{I|L}A]{I|L}{[MG]|[TS]}[C(Carbamidomethyl (C))H]G{I|L};[AG]D[HV]K{I|L}[MT] 2.5849;1.8936;1.4202;0.91033;0.37461;0.23726 -;-;-;-;-;- 88 + 1 1.494 38720.8 1.0 3210 5201 8409 HBL1_DMSO_200M_050219_1,8413 HBL1_DMSO_200M_050219_1,8413,SYIKSSSSL False True SYIKSSSSL 44.381677 486.255603015423 10383005.0 8409.0 ENSG00000184661|ENST00000330560|CDCA2 6.407214800516765 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8414 44.383 36.0 1639400.0 25 0 157080.0 + 4430 DAVYGQKEI 9 85 511.7608968840431 1021.507240834886 2 511.7613403201103 MULTI CID FTMS 0 0 0 8409 1629025.625 0.8807075635992367 -1 0.1004981994628906 5 Unmodified _DAVYGQKEI_ ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1 29.84058131909904 0.1515068451768857 3 {[DA]|[EG]}VY 4 5 43.188 0.0 0.0 4.2278 0.0 0.0 0.0 570.2900270704723 570.2900270704723 10.192317264576864 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}VY 4.2278 + + 227 + 1 1.494 49634.2 1.0 3211 5201 8409 HBL1_DMSO_200M_050219_1,8414 HBL1_DMSO_200M_050219_1,8414,DAVYGQKEI False True DAVYGQKEI 44.382857 511.76134032011 11028148.0 8409.0 ENSG00000145907|ENST00000356245|G3BP1;;nc|ENSG00000145907|Q13283-2|G3BP1;;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;;ENST00000519832.1_1_5:151166169-151170647:+|nuORF 5.608323733011882 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8415 44.384 40.0 2014400.0 25 0 265220.0 22091 LPPPVAVRK 9 69 326.2149630110197 975.6230596332592 3 326.2147704958916 MULTI CID FTMS 0 0 0 8409 1114387.0 0.3865408070399531 10 -0.8782844543457031 6 Unmodified _LPPPVAVRK_ ENSG00000184271|ENST00000333640|POU6F1;nc|ENSG00000184271|Q14863|POU6F1 15.847184025352805 0.4077185912009129 3 {I|L}PPP 4 5 52.18 0.0 0.0 5.3484 0.0 0.0 0.0 568.3579631384962 568.3579631384962 46.69592522764098 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + {I|L}PPP 5.3484 + + 32 + 1 1.494 72455.0 1.0 3212 5201 8409 HBL1_DMSO_200M_050219_1,8415 HBL1_DMSO_200M_050219_1,8415,LPPPVAVRK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8416 44.385 54.0 901350.0 25 0 76773.0 + 2465 AQYDGAYKV 9 79 507.7481150540455 1013.4816771748908 2 507.7480956912041 MULTI CID FTMS 0 0 0 8409 940802.375 0.7139001115276403 -1 0.1004981994628906 7 Unmodified _AQYDGAYKV_ ENSG00000168291|ENST00000302746|PDHB;ENST00000469827.1_1_3:58417358-58419536:-|nuORF;ENST00000480626.5_1_3:58417333-58419536:-|nuORF;ENST00000482894.5_1_3:58417133-58419536:-|nuORF;nc|ENSG00000168291|P11177-2|PDHB;nc|ENSG00000168291|P11177-3|PDHB 22.736283301280096 0.2418982879461534 3 [QA]YDQYKV 8 2 [QA] + + 31.375 19.062 9.5745 3.0958 3.0958 50.405 0.0 0.0 0.0 0.0 18.90092514408778 0.0 0.0 0 0.5 0.0 0.0 0.0 [QA]YDQYKV 3.0958 - 122 + 1 1.494 42376.4 1.0 3213 5201 8409 HBL1_DMSO_200M_050219_1,8416 HBL1_DMSO_200M_050219_1,8416,AQYDGAYKV False True AQYDGAYKV 44.385413 507.748095691204 7863955.0 8409.0 ENST00000482894.5_1_3:58417133-58419536:-|nuORF;;ENSG00000168291|ENST00000302746|PDHB;;nc|ENSG00000168291|P11177-2|PDHB;;ENST00000480626.5_1_3:58417333-58419536:-|nuORF;;ENST00000469827.1_1_3:58417358-58419536:-|nuORF;;nc|ENSG00000168291|P11177-3|PDHB 6.727131048838298 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8417 44.387 45.0 1478300.0 25 0 115980.0 + 44741 YPLAFPSLV 9 99 503.78250582572656 1005.5504587182533 2 503.7812988162041 MULTI CID FTMS 0 0 0 8409 981758.1875 0.0983358012650781 -6 0.5219993591308594 8 Unmodified _YPLAFPSLV_ REV__ENSG00000108510|ENST00000397786|MED13 38.15118350030904 0.0856056900103839 3 YP{I|L}E 4 -1 66.23 0.0 0.0 6.5864 0.0 0.0 0.0 500.2709444635376 500.2709444635376 54.01145969223869 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.1549471895720984 0.0 YP{I|L}E 6.5864 - 278 + 1 1.494 55946.6 1.0 3214 5201 8409 HBL1_DMSO_200M_050219_1,8417 HBL1_DMSO_200M_050219_1,8417,YPLAFPSLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8418 44.388 78.0 745200.0 25 0 118800.0 + 41986 VQNGKVIGV 9 86 457.2766888995118 912.5388248658236 2 457.2765380740166 MULTI CID FTMS 0 0 0 8409 759407.4375 1.0 0 0.0 9 Unmodified _VQNGKVIGV_ ENSG00000057608|ENST00000380191|GDI2;nc|ENSG00000057608|P50395-2|GDI2 71.13359017698441 0.0206607516130725 3 VQN[RK]{I|L}GV 8 2 + 57.534 0.0 0.0 6.3048 6.3048 89.337 0.0 0.0 0.0 23.8566032266867 9.141974908773918 9.141974908773918 9.262137858390815 0 1.274227503252014 1.0969100130080565 0.0 0.0 VQN[RK]{I|L}GV;VQGG[RK]{I|L}GV;{[QV]|[N{I|L}]|[RA]|[KV]}NGKV{I|L}R;[VG]ANGKV{I|L}R;V[AG]N[RK]{I|L}GV;[W{I|L}]V{I|L}N{I|L}R;{[QV]|[N{I|L}]|[RA]|[KV]}[W{I|L}]V{I|L}R;{[QV]|[N{I|L}]|[RA]|[KV]}GGGKV{I|L}R;[VG]AGGGKV{I|L}R;[W{I|L}]VQV{I|L}R 6.3048;5.2898;4.4521;4.222;4.0878;3.6136;3.5953;3.4371;3.2129;3.153 -;-;-;-;-;-;-;-;-;- 385 + 1 1.494 51001.9 1.0 3215 5201 8409 HBL1_DMSO_200M_050219_1,8418 HBL1_DMSO_200M_050219_1,8418,VQNGKVIGV True True VQNGKVIGV 44.388419 457.276538074017 3962553.25 8409.0 ENSG00000057608|ENST00000380191|GDI2;;nc|ENSG00000057608|P50395-2|GDI2 6.851221084594727 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8419 44.39 93.0 701740.0 25 0 56312.0 + -1 MQDDNQVMV 9 88 548.2254025852681 1094.436252237336 2 548.2261840701103 MULTI CID FTMS 0 0 0 8409 513748.53125 0.4163683529160406 2 -0.1826019287109375 10 Oxidation (M) _MQDDNQVM(Oxidation (M))V_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 21.53697664764585 0.2571576504437394 3 VS[H{I|L}]QHSV 8 -1 28.457 0.0 0.0 2.6002 0.0 0.0 188.9767535770188 0.0 188.9767535770188 0.0 -2.1676517656219225 -2.1676517656219225 0.0 0 0.0 0.0 0.6139829889124311 0.0 VS[H{I|L}]QHSV 2.6002 - 277 + 1 1.494 55528.7 1.0 3216 5201 8409 HBL1_DMSO_200M_050219_1,8419 HBL1_DMSO_200M_050219_1,8419,MQDDNQVMV False False MQDDNQVMV 44.390467 548.22618407011 7506989.5 8409.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 5.898738702138265 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8420 44.392 83.0 662220.0 25 0 50506.0 28933 QATGLVMML 9 84 482.2517950643245 962.4890371954492 2 482.2519103884697 MULTI CID FTMS 0 0 0 8409 458816.03125 0.9655363647381888 2 -0.1826019287109375 11 Unmodified _QATGLVMML_ ENSG00000174326|ENST00000574600|SLC16A11;nc|ENSG00000174326|Q8NCK7|SLC16A11 19.256988751693697 0.3154191944385105 3 [YV]MS 4 7 37.848 0.0 0.0 3.9323 0.0 0.0 0.0 479.2728365533813 479.2728365533813 24.01888575467845 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.5 0.0 [YV]MS 3.9323 - 116 + 1 1.494 48502.1 1.0 3217 5201 8409 HBL1_DMSO_200M_050219_1,8420 HBL1_DMSO_200M_050219_1,8420,QATGLVMML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8421 44.401 518.0 394550.0 25 0 24941.0 + 38516 TSNPSTVTTAP 11 143 538.2683542568543 1074.5221555805083 2 538.2679321169853 MULTI CID FTMS 0 0 0 8409 401550.96875 0.8228041895190817 -1 0.1004981994628906 12 Unmodified _TSNPSTVTTAP_ REV__ENSG00000065609|ENST00000369694|SNAP91;REV__nc|ENSG00000065609|O60641-3|SNAP91;REV__nc|ENSG00000065609|O60641-4|SNAP91 13.042465956692816 0.7638483625850725 3 ST[PA]P{I|L}HVR 9 -1 35.921 0.0 0.0 3.343 0.0 0.0 97.9751593666203 0.0 97.9751593666203 0.0 18.868325047865888 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.4247425010840047 ST[PA]P{I|L}HVR 3.343 - 440 + 1 1.494 160005.7 1.0 3218 5201 8409 HBL1_DMSO_200M_050219_1,8421 HBL1_DMSO_200M_050219_1,8421,TSNPSTVTTAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8422 44.404 121.0 813150.0 25 0 67715.0 + 5822 DPRVGIRSV 9 111 333.52961557963624 997.5670173391088 3 333.5293456912041 MULTI CID FTMS 0 0 0 8409 340986.28125 0.8370638589122427 -1 0.1004981994628906 13 Unmodified _DPRVGIRSV_ ENSG00000137802|ENST00000457542|MAPKBP1;nc|ENSG00000137802|O60336-2|MAPKBP1;nc|ENSG00000137802|O60336-3|MAPKBP1;nc|ENSG00000137802|O60336|MAPKBP1 12.174745833636583 0.5071271664557081 3 DPRVG{I|L} 6 3 49.175 0.0 0.0 4.9295 0.0 0.0 0.0 357.1895540095392 357.1895540095392 44.76480765336908 0.0 0.0 0.0 0 0.25 0.8538719643217619 0.0 0.0 + DPRVG{I|L} 4.9295 + + 128 + 1 1.494 82918.8 1.0 3219 5201 8409 HBL1_DMSO_200M_050219_1,8422 HBL1_DMSO_200M_050219_1,8422,DPRVGIRSV False True DPRVGIRSV 44.403963 333.529345691204 2575137.5 8409.0 nc|ENSG00000137802|O60336-2|MAPKBP1;;ENSG00000137802|ENST00000457542|MAPKBP1;;nc|ENSG00000137802|O60336-3|MAPKBP1;;nc|ENSG00000137802|O60336|MAPKBP1 1.2607228755950928 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8423 44.406 122.0 720390.0 25 0 356920.0 -1 0 72 467.251713843716 466.244437377116 1 467.2518188357353 MULTI CID FTMS 0 0 0 8409 338807.125 0.1258081812773105 -2 0.1619529724121093 14 3 V 1 -1 12.218 0.0 0.0 2.6206 0.0 0.0 349.16508206881366 0.0 349.16508206881366 0.0 -0.3444064470390628 -0.3444064470390628 0.0 0 0.0 0.0 0.0 0.0 V 2.6206 - 14 + 1 1.494 74845.9 1.0 3220 5201 8409 HBL1_DMSO_200M_050219_1,8423 HBL1_DMSO_200M_050219_1,8423, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8424 44.41 186.0 367880.0 25 0 19776.0 + 28387 PSPEKVDV 8 108 435.73190224853386 869.4492515638677 2 435.7319518923759 MULTI CID FTMS 0 0 0 8409 256540.3125 0.4885874898405484 -23 1.7410240173339844 15 Unmodified _PSPEKVDV_ REV__ENSG00000067369|ENST00000382044|TP53BP1;REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF;REV__nc|ENSG00000067369|Q12888-3|TP53BP1;REV__nc|ENSG00000067369|Q12888|TP53BP1 13.50788311687929 0.7113601687236069 3 V 1 -1 13.979 0.0 0.0 1.6078 0.0 0.0 752.369789444042 0.0 752.369789444042 0.0 4.515449934959719 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.6078 + + 99 + 1 1.494 60135.3 1.0 3221 5201 8409 HBL1_DMSO_200M_050219_1,8424 HBL1_DMSO_200M_050219_1,8424,PSPEKVDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8425 44.414 207.0 399680.0 25 0 25758.0 + 16857 KIEKELETV 9 146 544.8133808372926 1087.612208741385 2 544.8128539919853 MULTI CID FTMS 0 0 0 8409 246562.125 1.0 0 0.0 16 Unmodified _KIEKELETV_ ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF 15.738622578938676 0.4106572216562794 3 [DP]Y{I|L} 4 8 26.167 0.0 0.0 2.4059 0.0 0.0 0.0 596.3578501810913 596.3578501810913 7.380317728291757 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.4194451763165202 0.0 [DP]Y{I|L} 2.4059 - 646 1 1.494 67951.8 1.0 3222 5201 8409 HBL1_DMSO_200M_050219_1,8425 HBL1_DMSO_200M_050219_1,8425,KIEKELETV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8426 44.426 675.0 238210.0 25 0 37105.0 -1 NPMFLEKMDF 10 127 644.2907815629203 1286.5670101926405 2 644.2909423708916 MULTI CID FTMS 0 0 0 8409 233701.1875 1.0 0 0.0 17 Oxidation (M) _NPMFLEKM(Oxidation (M))DF_ ENSG00000169258|ENST00000303991|GPRIN1;nc|ENSG00000169258|Q7Z2K8-2|GPRIN1 13.90604991867851 0.6142120002215601 3 [MN]PN{I|L}NADQ[RD] 11 -1 + 85.671 0.0 0.0 6.6589 6.6589 86.682 0.0 0.0 0.0 54.21038987854996 7.869234278620226 7.869234278620226 6.237125054200234 0 0.7302046884880937 1.6989700043360187 0.2887254899964357 1.4291746928241125 [MN]PN{I|L}NADQ[RD];[MN]PNN{I|L}ADQ[RD];[MN]PN{I|L}NAD[AG][RD];[MN]PGG{I|L}NADQ[RD];[MN]PN{I|L}GGADQ[RD];[MN]PN{I|L}NAD[HV]Y;[MN]PNGG{I|L}ADQ[RD];[MN]PGGN{I|L}ADQ[RD];[MN]PNN{I|L}AD[AG][RD];[MN]PN{I|L}{[WN]|[YH]}Q[RD] 6.6589;6.1741;5.9494;5.9494;5.9494;5.4813;5.4646;5.4646;5.4646;5.3923 -;-;-;-;-;-;-;-;-;- 1339 + 1 1.494 120024.1 1.0 3223 5201 8409 HBL1_DMSO_200M_050219_1,8426 HBL1_DMSO_200M_050219_1,8426,NPMFLEKMDF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8427 44.433 427.0 565840.0 25 0 59300.0 20989 LNQSSHFSL 9 225 344.8419289648685 1031.5039574948055 3 344.8417541384697 MULTI CID FTMS 0 0 0 8409 203159.515625 0.497667027146033 -1 0.1004981994628906 18 Unmodified _LNQSSHFSL_ AluJb_dup83104|chr12:47217123-47217390:+|2.087559342868773|0.1567787654372586|3.74|48.0|16|2|anti-sense 25.399314129420983 0.2080152500878129 3 {[QV]|[N{I|L}]|[RA]|[KV]}[KQ]S 5 5 25.431 0.0 0.0 2.4654 0.0 0.0 0.0 458.1679198357768 458.1679198357768 0.2764280577516587 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.4247425010840047 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}[KQ]S 2.4654 - 407 1 1.494 190813.2 1.0 3224 5201 8409 HBL1_DMSO_200M_050219_1,8427 HBL1_DMSO_200M_050219_1,8427,LNQSSHFSL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 8428 44.447 800.0 341160.0 25 0 28017.0 + 2000 APAPPSKVI 9 227 440.2684194222457 878.5222859112914 2 440.2678710818291 MULTI CID FTMS 0 0 0 8409 163243.875 0.318373697835325 -4 0.3652191162109375 19 Unmodified _APAPPSKVI_ ENSG00000062650|ENST00000298767|WAPL;nc|ENSG00000062650|Q7Z5K2-2|WAPL;nc|ENSG00000062650|Q7Z5K2-3|WAPL 85.64151623876279 0.0161498729896241 3 APAP[PS]KV{I|L} 9 0 + 84.715 0.0 0.0 9.6429 9.6429 92.805 0.0 0.0 0.0 25.55462187404089 7.296962438796157 7.296962438796157 7.296962438796157 0 2.0 1.6989700043360187 0.8851518780601924 0.0 + + APAP[PS]KV{I|L};APAP[PS]K{I|L}V;[PA]AP[KP]SV{I|L};[PA]A{I|L}GVAPA{I|L};APA[QA][{I|L}P]V{I|L};[PA]A{I|L}GAVPA{I|L};[PA]AP[Q{I|L}]AV{I|L};[PA]PSKVPA{I|L};[PA]A{I|L}GAPAV{I|L};[PA]A{I|L}QVPA{I|L} 9.6429;8.8123;6.7341;6.6035;6.3071;6.0604;5.974;5.8837;5.7642;5.6595 +;-;-;-;-;-;-;-;-;- + 1394 + 1 1.494 209668.5 0.8500000238418579 3225 5201 8409 HBL1_DMSO_200M_050219_1,8428 HBL1_DMSO_200M_050219_1,8428,APAPPSKVI True True APAPPSKVI 44.447167 440.267871081829 8632568.0 8409.0 nc|ENSG00000062650|Q7Z5K2-3|WAPL;;nc|ENSG00000062650|Q7Z5K2-2|WAPL;;ENSG00000062650|ENST00000298767|WAPL 6.816712538401286 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8429 44.462 800.0 193530.0 25 0 8603.7 + -1 LTTLYMVLS 9 197 528.7879532974705 1055.561353661741 2 528.7880126833916 MULTI CID FTMS 0 0 0 8409 151794.359375 0.1024244020529838 3 -0.2649879455566406 20 Oxidation (M) _LTTLYM(Oxidation (M))VLS_ REV__ENSG00000171133|ENST00000302681|OR2K2 26.88365393820708 0.1891292719743517 3 {I|L}PAE{[CA]|SS}RPS{I|L} 10 -1 + 64.582 0.0 0.0 6.1183 6.1183 84.307 0.0 0.0 0.0 48.613049206769375 1.4461234201342563 1.4461234201342563 5.560214157233233 0 0.805462187404089 1.2218487496163564 0.9303115997617928 0.2396518287104437 {I|L}PAE{[CA]|SS}RPS{I|L};{I|L}PAE{[CA]|SS}RPTV;{I|L}PAE{[CA]|SS}RTPV;{I|L}PAE{[CA]|SS}RTVP;{I|L}PA[C(Carbamidomethyl (C))S]V{I|L}PS{I|L};{I|L}PA[C(Carbamidomethyl (C))S]V{I|L}PTV;{I|L}PA[{M(Oxidation (M))|F}V][Y{M(Oxidation (M))|F}]S{I|L};{I|L}PA[C(Carbamidomethyl (C))S]V{I|L}TPV;{I|L}PA[C(Carbamidomethyl (C))S]V{I|L}TVP;{I|L}PA[{M(Oxidation (M))|F}V][Y{M(Oxidation (M))|F}]TV 6.1183;5.5915;5.3289;5.248;5.0991;4.5724;4.5335;4.3097;4.2288;4.0067 -;-;-;-;-;-;-;-;-;- 1955 + 1 1.494 125590.8 0.9900000095367432 3226 5201 8409 HBL1_DMSO_200M_050219_1,8429 HBL1_DMSO_200M_050219_1,8429,LTTLYMVLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8431 44.466 5.1 10353000.0 25 0 2191900.0 + 41740 VPTDPPRTI 9 51 498.2796454378588 994.5447379425176 2 498.2798034548759 MULTI CID FTMS 0 0 0 8430 11671972.0 1.0 0 0.0 1 Unmodified _VPTDPPRTI_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 22.65808497894818 0.2428932432760099 3 VPTDPP 6 3 66.631 0.0 0.0 6.6996 0.0 0.0 0.0 385.2167147272094 385.2167147272094 33.44457550631503 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 + VPTDPP 6.6996 + + 47 + 1 1.496 47071.9 1.0 3227 5202 8430 HBL1_DMSO_200M_050219_1,8431 HBL1_DMSO_200M_050219_1,8431,VPTDPPRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8432 44.472 318.0 304200.0 25 0 54672.0 14022 IAGKVAVV 8 129 378.7523888160741 755.4902246989482 2 378.7522460818291 MULTI CID FTMS 0 0 0 8430 180900.46875 0.0672960957298431 3 -0.1922607421875 2 Unmodified _IAGKVAVV_ ENSG00000101444|ENST00000217426|AHCY;ENST00000480653.5_1_20:32878355-32891076:-|nuORF;nc|ENSG00000101444|P23526-2|AHCY 14.581692164780916 0.6954967302934248 3 [KG]{[VA]|[{I|L}G]}VA{I|L}V 8 4 [KG]{[VA]|[{I|L}G]}VA{I|L} + + 12.218 -4.1811 -0.65493 1.6173 1.6173 48.594 0.0 0.0 0.0 0.0 -6.542294029922999 -6.542294029922999 0.0 0 0.0 0.0 0.0 0.0 [KG]{[VA]|[{I|L}G]}VA{I|L}V 1.6173 - 166 + 1 1.496 78460.6 1.0 3228 5202 8430 HBL1_DMSO_200M_050219_1,8432 HBL1_DMSO_200M_050219_1,8432,IAGKVAVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8433 44.473 38.0 1315300.0 25 0 132660.0 + 16040 ITISSVVSSL 10 88 335.8662583152137 1004.5769455458412 3 335.8660766482353 MULTI CID FTMS 0 0 0 8430 1473696.125 0.3727691448932333 -3 0.2514152526855469 3 Unmodified _ITISSVVSSL_ REV__ENSG00000060237|ENST00000315939|WNK1;REV__nc|ENSG00000060237|Q9H4A3-2|WNK1;REV__nc|ENSG00000060237|Q9H4A3-4|WNK1;REV__nc|ENSG00000060237|Q9H4A3-5|WNK1;REV__nc|ENSG00000060237|Q9H4A3-6|WNK1;REV__nc|ENSG00000060237|Q9H4A3-7|WNK1 22.736283301280096 0.4578556481593033 3 SPV{I|L} 4 -1 31.128 0.0 0.0 3.0986 0.0 0.0 590.3285072668178 0.0 590.3285072668178 0.0 15.55462187404089 0.0 0.0 0 0.6435078169319297 0.0 0.8494850021680094 0.0 SPV{I|L} 3.0986 - 80 1 1.496 47169.5 1.0 3229 5202 8430 HBL1_DMSO_200M_050219_1,8433 HBL1_DMSO_200M_050219_1,8433,ITISSVVSSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8434 44.476 115.0 481400.0 25 0 57680.0 + 11525 GIPEKDLHSV 10 92 547.7949047259546 1093.575256518709 2 547.7958251833916 MULTI CID FTMS 0 0 0 8430 572451.5 1.0 0 0.0 4 Unmodified _GIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 31.26834338654808 0.266153677697784 3 {[VA]|[{I|L}G]}PE{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}HSV 10 0 + 54.618 0.0 0.0 4.9945 4.9945 73.669 0.0 0.0 0.0 7.9190112976670335 10.255762612236907 7.9190112976670335 0.796896906561031 0 0.3252574989159953 2.0 0.805462187404089 0.0 + + {[VA]|[{I|L}G]}PE{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}HSV;{[VA]|[{I|L}G]}P{M(Oxidation (M))|F}[{I|L}P]QHSV;{[VA]|[{I|L}G]}P{M(Oxidation (M))|F}[QP]{I|L}HSV;{[VA]|[{I|L}G]}PWW{I|L}HSV;{[VA]|[{I|L}G]}P{M(Oxidation (M))|F}[{I|L}P][AG]HSV;{[VA]|[{I|L}G]}[NG]Q[H{I|L}]SVAV;{[VA]|[{I|L}G]}[NG]{I|L}[HQ]SVAV;{[VA]|[{I|L}G]}[NG]Q[H{I|L}]WAV;{[VA]|[{I|L}G]}P{M(Oxidation (M))|F}[VS][KT]{M(Oxidation (M))|F}V;{[VA]|[{I|L}G]}[HS]V[EP]SVAV 4.9945;4.9216;4.4853;4.3243;4.0835;3.5945;3.1582;2.9932;2.7707;2.7219 +;-;-;-;-;-;-;-;-;- + 305 + 1 1.496 49127.7 1.0 3230 5202 8430 HBL1_DMSO_200M_050219_1,8434 HBL1_DMSO_200M_050219_1,8434,GIPEKDLHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8435 44.477 36.0 641080.0 25 0 42717.0 40287 VGVCALPGGTL 11 57 493.7717052195752 985.5288575059504 2 493.7722656130791 MULTI CID FTMS 0 0 0 8430 613620.25 1.0 0 0.0 5 Unmodified _VGVCALPGGTL_ ENSG00000198445|ENST00000359963|CCT8L2 13.90604991867851 0.7458848613461305 3 [{I|L}T][QT][VP]NT{I|L} 9 8 [{I|L}T][QT][VP]N + + 21.281 10.703 1.4207 2.1594 2.1594 48.98 0.0 0.0 0.0 0.0 7.469165662315689 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 [{I|L}T][QT][VP]NT{I|L} 2.1594 - 62 + 1 1.496 23417.1 1.0 3231 5202 8430 HBL1_DMSO_200M_050219_1,8435 HBL1_DMSO_200M_050219_1,8435,VGVCALPGGTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8436 44.488 617.0 180460.0 25 0 36125.0 19123 LDWGSLPHHVV 11 86 630.3291110593259 1258.6436691854517 2 630.3284789919853 MULTI CID FTMS 0 0 0 8430 271403.0625 1.0 0 0.0 6 Unmodified _LDWGSLPHHVV_ nc|ENSG00000164616|Q9UKT6|FBXL21P 2.9952420565917617 0.861016188266951 3 SN 2 10 11.766 0.0 0.0 0.93482 0.0 0.0 65.97563966706691 988.5687385795668 1054.5443782466336 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 SN 0.93482 - 36 + 1 1.496 88821.5 1.0 3232 5202 8430 HBL1_DMSO_200M_050219_1,8436 HBL1_DMSO_200M_050219_1,8436,LDWGSLPHHVV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8437 44.492 200.0 264810.0 25 0 42608.0 + 5914 DPYQPNRVV 9 81 544.2796967062995 0 544.2792846560478 PEAK CID FTMS 0 0 0 8430 272411.3125 1.0 0 0.0 7 Unmodified _DPYQPNRVV_ ENSG00000214595|ENST00000356458|EML6;nc|ENSG00000214595|Q6ZMW3-2|EML6 37.97399986684836 0.0716774499419844 3 YQ 2 7 25.701 0.0 0.0 2.3654 0.0 0.0 212.0817800319365 580.3205867056087 792.4023667375452 0.0 0.0 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.4247425010840047 + YQ 2.3654 + + 26 + 1 1.496 49874.6 1.0 3233 5202 8430 HBL1_DMSO_200M_050219_1,8437 HBL1_DMSO_200M_050219_1,8437,DPYQPNRVV True True DPYQPNRVV 44.491616 544.279284656048 3919190.25 8430.0 ENSG00000214595|ENST00000356458|EML6;;nc|ENSG00000214595|Q6ZMW3-2|EML6 6.470001538594564 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8438 44.495 197.0 233240.0 25 0 11686.0 + -1 KQHSGEFTV 9 85 516.7577786424577 1031.5010043517152 2 516.7582885622978 MULTI CID FTMS 0 0 0 8430 233126.5 0.5801969328156495 -1 0.0894622802734375 8 Oxidation (M) _TFFGLTM(Oxidation (M))TV_ nc|ENSG00000185480|Q9NWS1-7|PARPBP;ENST00000541668.5_1_12:102514215-102548625:+|nuORF;nc|ENSG00000185480|Q9NWS1-4|PARPBP;nc|ENSG00000185480|Q9NWS1-3|PARPBP;nc|ENSG00000185480|Q9NWS1-6|PARPBP;ENSG00000185480|ENST00000327680|PARPBP;ENST00000392914.3_1_12:102517666-102545686:+|nuORF 28.486842064014134 0.1687311288560894 3 [HA][WK][SG]{M(Oxidation (M))|F}TV 9 -1 + 39.371 0.0 0.0 3.8168 3.8168 83.596 0.0 0.0 0.0 3.925449767853316 27.38106231821711 3.925449767853316 19.54242509439325 0 0.5 1.3010299956639813 0.4247425010840047 0.0 [HA][WK][SG]{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}T][VS][MT]{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[MT]{M(Oxidation (M))|F}TV 3.8168;1.9223;1.6304 -;-;- 149 1 1.496 41840.9 1.0 3234 5202 8430 HBL1_DMSO_200M_050219_1,8438 HBL1_DMSO_200M_050219_1,8438,TFFGLTMTV False False KQHSGEFTV 44.495398 516.758288562298 1938332.875 8430.0 nc|ENSG00000185480|Q9NWS1-7|PARPBP;;ENST00000541668.5_1_12:102514215-102548625:+|nuORF;;nc|ENSG00000185480|Q9NWS1-4|PARPBP;;nc|ENSG00000185480|Q9NWS1-3|PARPBP;;nc|ENSG00000185480|Q9NWS1-6|PARPBP;;ENSG00000185480|ENST00000327680|PARPBP;;ENST00000392914.3_1_12:102517666-102545686:+|nuORF 2.2165425568819046 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8439 44.507 686.0 195130.0 25 0 12062.0 + 2411 AQQEFWQL 8 146 525.2540155984619 1048.4934782637238 2 525.2546264529228 MULTI CID FTMS 0 0 0 8430 212810.25 0.9619056611995428 -1 0.0894622802734375 9 Unmodified _AQQEFWQL_ REV__ENSG00000173545|ENST00000308683|ZNF622 34.10243960390752 0.3329570729325616 3 [YE]TM[HK]{I|L}Q 8 -1 + 51.502 0.0 0.0 4.912 4.912 74.297 0.0 0.0 0.0 1.3329467548003748 9.262137858390815 1.3329467548003748 1.3329467548003748 0 1.086696871556164 1.5228787452803376 0.0 0.0 [YE]TM[HK]{I|L}Q;{[QG]|[NA]}{M(Oxidation (M))|F}[RD]W{I|L}Q;[YE][RH]G{M(Oxidation (M))|F}{I|L}Q;{[QG]|[NA]}{M(Oxidation (M))|F}[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L}Q;{[QG]|[NA]}{M(Oxidation (M))|F}[RD]{[DA]|[EG]}{I|L}Q;[AG]G{M(Oxidation (M))|F}[RD]W{I|L}Q;{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[QG]|[NA]}{M(Oxidation (M))|F}[RD]{I|L}WQ;{[CA]|SS}{I|L}WC{[NV]|[RG]}{I|L}Q 4.912;4.7849;4.4192;3.9667;3.9015;3.8782;3.6096;3.6096;3.5671;3.4215 -;-;-;-;-;-;-;-;-;- 912 1 1.496 106424.0 1.0 3235 5202 8430 HBL1_DMSO_200M_050219_1,8439 HBL1_DMSO_200M_050219_1,8439,AQQEFWQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8440 44.511 162.0 785810.0 25 0 104740.0 + 26996 PEKDLHSV 8 139 462.7426939299881 0 462.7426330447197 PEAK CID FTMS 0 0 0 8430 204330.140625 1.0 0 0.0 10 Unmodified _PEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 78.7280429016045 1.333496670614214e-05 3 SPEVGS 6 6 24.448 0.0 0.0 2.6474 0.0 0.0 117.07742016061624 247.1201113336547 364.19753149427095 0.0 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.25 0.0 SPEVGS 2.6474 - 674 + 1 1.496 99687.5 1.0 3236 5202 8430 HBL1_DMSO_200M_050219_1,8440 HBL1_DMSO_200M_050219_1,8440,PEKDLHSV True True PEKDLHSV 44.510514 462.74263304472 2392287.75 8430.0 ENST00000606952.5_1_1:156203463-156206310:+|nuORF;;ENSG00000160783|ENST00000368277|PMF1;;nc|ENSG00000160783|Q6P1K2-2|PMF1;;nc|ENSG00000160783|Q6P1K2-4|PMF1 4.355683008829753 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8441 44.524 800.0 112900.0 25 0 15078.0 9836 FPEEYNFY 8 59 1108.462106678272 1107.454830211672 1 1108.465747058392 MULTI CID FTMS 0 0 0 8430 181579.625 0.5910688660492665 1 -0.0931396484375 11 Unmodified _FPEEYNFY_ ENSG00000175764|ENST00000321582|TTLL11;nc|ENSG00000175764|Q8NHH1-2|TTLL11 18.13498045792455 0.6430038125133779 3 YYGSGEAAQY 10 8 + 49.862 0.0 0.0 4.5024 4.5024 75.692 0.0 0.0 0.0 4.259687322722812 40.654207572983054 4.259687322722812 3.0102999566398125 0 0.5 0.0 0.7742275032520141 0.4247425010840047 YYGSGEAAQY;YYGSGAEAQY;YYGSQEAQY;YYGSG[PS]SQY;YYGSGE[RN]Y;YYGSQEA[AG]Y;YYGSGEAA[AG]Y;YYGSG[RD]QY;YYGSGAEA[AG]Y;YY[NS]EAAQY 4.5024;4.2306;4.1844;3.8442;3.5735;3.3529;3.2914;3.2544;3.0195;2.7631 -;-;-;-;-;-;-;-;-;- 254 1 1.496 70917.1 0.7599999904632568 3237 5202 8430 HBL1_DMSO_200M_050219_1,8441 HBL1_DMSO_200M_050219_1,8441,FPEEYNFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8442 44.538 782.0 144370.0 25 0 25053.0 22810 LRAELGRAPSP 11 121 583.8357737662327 1165.656994599265 2 583.8366577029228 MULTI CID FTMS 0 0 0 8430 133857.078125 1.0 0 0.0 12 Unmodified _LRAELGRAPSP_ ENSG00000183072|ENST00000329198|NKX2-5;nc|ENSG00000183072|P52952-2|NKX2-5;nc|ENSG00000183072|P52952-3|NKX2-5 19.361941925380144 0.6323962752489956 3 VG{I|L}[WQ]{I|L}T 7 10 32.819 0.0 0.0 2.8155 0.0 0.0 0.0 365.1942537897094 365.1942537897094 20.05502983168543 0.0 0.0 0.0 0 0.4826446478103828 1.3010299956639813 0.2887254899964357 0.0 VG{I|L}[WQ]{I|L}T 2.8155 - 162 + 1 1.496 92653.0 1.0 3238 5202 8430 HBL1_DMSO_200M_050219_1,8442 HBL1_DMSO_200M_050219_1,8442,LRAELGRAPSP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8443 44.553 800.0 140960.0 25 0 7806.1 + -1 NTPEYMEKI 9 145 570.7657368709099 0 570.7645141482353 PEAK CID FTMS 0 0 0 8430 137045.796875 1.0 0 0.0 13 Oxidation (M) _NTPEYM(Oxidation (M))EKI_ ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2 24.99096001346401 0.1558265925128033 3 PEEW[VP]T 7 -1 23.281 0.0 0.0 2.043 0.0 0.0 215.09093803935485 83.02575098209218 298.11668902144703 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9604093769761876 0.0 PEEW[VP]T 2.043 - 134 + 1 1.496 90781.8 0.8500000238418579 3239 5202 8430 HBL1_DMSO_200M_050219_1,8443 HBL1_DMSO_200M_050219_1,8443,NTPEYMEKI False False NTPEYMEKI 44.553227 570.764514148235 1087406.875 8430.0 ENSG00000196591|ENST00000519065|HDAC2;;nc|ENSG00000196591|Q92769-3|HDAC2 4.099711736043294 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8444 44.555 94.0 741550.0 25 0 79066.0 + 41507 DGFKDEATV 9 103 490.8100680979652 979.6055832627304 2 490.8103210330009 MULTI CID FTMS 0 0 0 8430 129586.65625 0.7238248460937065 -1 0.0894622802734375 14 Unmodified _VPNLKPLTV_ nc|ENSG00000070915|P55017-3|SLC12A3;ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3 11.640296217721598 0.521594087909532 3 A{M(Oxidation (M))|F}YYTV 6 7 33.862 0.0 0.0 3.4567 0.0 0.0 217.28821845855708 0.0 217.28821845855708 0.0 17.224245805624918 0.0 0.0 0 0.0 0.0 1.4476212463643423 0.0 A{M(Oxidation (M))|F}YYTV 3.4567 - 235 + 1 1.496 55747.1 1.0 3240 5202 8430 HBL1_DMSO_200M_050219_1,8444 HBL1_DMSO_200M_050219_1,8444,VPNLKPLTV False False DGFKDEATV 44.555276 490.810321033001 31017066.0 8430.0 nc|ENSG00000070915|P55017-3|SLC12A3;;ENSG00000070915|ENST00000563236|SLC12A3;;nc|ENSG00000070915|P55017-2|SLC12A3 5.8920769691467285 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8446 44.56 18.0 2330300.0 25 0 429910.0 + 45850 YYQDTPKQI 9 69 578.2874516896823 1154.5603504461644 2 578.2878906130791 MULTI CID FTMS 0 0 0 8445 2640817.75 0.2788382286669282 2 -0.09912109375 1 Unmodified _YYQDTPKQI_ ENSG00000048162|ENST00000614830|NOP16 56.17704186161178 0.0281986971544335 3 YYQDTPKQ{I|L} 9 0 + 74.58 0.0 0.0 6.4596 6.4596 89.195 0.0 0.0 0.0 50.209347275122624 12.452811690915269 12.452811690915269 9.208187539523747 0 0.8494850021680094 2.0 0.3807196863200844 0.9247425010840048 + + YYQDTPKQ{I|L};YY[AG]DTPKQ{I|L};YYQDTPK[AG]{I|L};YY[AG]DTPK[AG]{I|L};[KP]QTD[Q{I|L}]YY;[KP][AG]TD[Q{I|L}]YY 6.4596;5.6621;5.2942;4.5004;1.3483;0.55079 +;-;-;-;-;- + 134 + 1 1.496 39497.0 1.0 3241 5203 8445 HBL1_DMSO_200M_050219_1,8446 HBL1_DMSO_200M_050219_1,8446,YYQDTPKQI True True YYQDTPKQI 44.559591 578.287890613079 119755736.0 8445.0 ENSG00000048162|ENST00000614830|NOP16 8.141521771748861 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8447 44.561 23.0 1116200.0 25 0 220350.0 18546 LAAARLAAA 9 47 414.2584065769845 826.502260220769 2 414.2585021853447 MULTI CID FTMS 0 0 0 8445 1468312.625 0.0819093343483167 2 -0.09912109375 2 Unmodified _LAAARLAAA_ ENSG00000167004|ENST00000300289|PDIA3;ENST00000469684.1_1_15:44038662-44048907:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF 18.13498045792455 0.3457906370836843 3 A 1 8 11.783 0.0 0.0 1.4256 0.0 0.0 737.4538878836581 0.0 737.4538878836581 0.0 4.793036574208873 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 1.4256 + + 5 + 1 1.496 26445.0 1.0 3242 5203 8445 HBL1_DMSO_200M_050219_1,8447 HBL1_DMSO_200M_050219_1,8447,LAAARLAAA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8448 44.562 6.9 6425700.0 25 0 624860.0 + 24952 MPPPPPQGV 9 71 460.2385793050109 918.462605676822 2 460.2390624880791 MULTI CID FTMS 0 0 0 8445 7847668.0 0.260690351072543 -20 1.5092201232910156 3 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 67.03532852164291 0.0222449892513529 3 {NN|[MP]|[D{I|L}]|[EV]}PPP[QP]GV 9 0 + 31.308 0.0 0.0 3.4087 3.4087 77.032 0.0 0.0 0.0 15.109849771020482 3.988343711055936 3.988343711055936 6.605283153034382 0 1.6989700043360187 0.0 0.0 0.6747425010840047 + + {NN|[MP]|[D{I|L}]|[EV]}PPP[QP]GV;{NN|[MP]|[D{I|L}]|[EV]}YK[QP]GV 3.4087;2.6895 +;- + 196 + 1 1.496 39097.8 1.0 3243 5203 8445 HBL1_DMSO_200M_050219_1,8448 HBL1_DMSO_200M_050219_1,8448,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8449 44.563 9.5 3574800.0 25 0 318080.0 + 43092 VYNASNNEL 9 53 512.2406208061103 1022.4666886790206 2 512.2411376833916 MULTI CID FTMS 0 0 0 8445 5717062.5 0.31667164074441 -2 0.1826019287109375 4 Unmodified _VYNASNNEL_ ENSG00000142937|ENST00000396651|RPS8 12.531546534597751 0.4974689918368763 3 [YV]NA 4 5 33.188 0.0 0.0 3.2458 0.0 0.0 0.0 572.2324412027111 572.2324412027111 17.578474942632592 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [YV]NA 3.2458 + + 67 1 1.496 34615.6 1.0 3244 5203 8445 HBL1_DMSO_200M_050219_1,8449 HBL1_DMSO_200M_050219_1,8449,VYNASNNEL False True VYNASNNEL 44.563126 512.241137683392 112402456.0 8445.0 ENSG00000142937|ENST00000396651|RPS8 5.449938138326009 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8450 44.564 21.0 2667500.0 25 0 450200.0 + 21317 LPESSRGLV 9 54 479.271824048722 956.529095164244 2 479.2719909548759 MULTI CID FTMS 0 0 0 8445 2772090.75 0.9866433788012622 -2 0.1826019287109375 5 Unmodified _LPESSRGLV_ ENST00000590866.2_1_19:1358969-1359134:+|nuORF 27.628801355627647 0.1796483985696185 3 {I|L}PESS 5 4 65.177 0.0 0.0 6.8139 0.0 0.0 0.0 440.2627352350219 440.2627352350219 37.730012720637376 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.8494850021680094 0.0 + {I|L}PESS 6.8139 + + 30 + 1 1.496 49742.8 1.0 3245 5203 8445 HBL1_DMSO_200M_050219_1,8450 HBL1_DMSO_200M_050219_1,8450,LPESSRGLV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8451 44.565 25.0 1399600.0 25 0 171470.0 + -1 FCEPHYKF 8 61 564.251014205408 1126.4874754776158 2 564.2518188357353 MULTI CID FTMS 0 0 0 8445 2113711.5 0.4022094665135373 1 -0.0823860168457031 6 Carbamidomethyl (C) _FC(Carbamidomethyl (C))EPHYKF_ REV__ENSG00000182541|ENST00000331728|LIMK2;REV__nc|ENSG00000182541|P53671-2|LIMK2;REV__nc|ENSG00000182541|P53671-3|LIMK2 5.230669730166228 0.792582437072536 3 {I|L}TV[YQ]{[QG]|[NA]} 7 -1 28.728 0.0 0.0 2.5503 0.0 0.0 319.0668202130875 0.0 319.0668202130875 0.0 13.322194502297007 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 {I|L}TV[YQ]{[QG]|[NA]} 2.5503 - 47 1 1.496 31572.5 1.0 3246 5203 8445 HBL1_DMSO_200M_050219_1,8451 HBL1_DMSO_200M_050219_1,8451,FCEPHYKF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8452 44.567 32.0 1113500.0 25 0 84003.0 + -1 SFQLHCYL 8 72 534.2540418808242 1066.4935308284482 2 534.2538940310478 MULTI CID FTMS 0 0 0 8445 1418833.5 0.4762451167818566 -2 0.1826019287109375 7 Carbamidomethyl (C) _SFQLHC(Carbamidomethyl (C))YL_ REV__ERVL-E-int_dup990|chr2:65053217-65053895:+|1.1304881482359876|0.1613831030990136|2.81|47.0|37|2|anti-sense 13.50788311687929 0.7113601687236069 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA 4 -1 24.27 0.0 0.0 2.2757 0.0 0.0 0.0 701.3112853052638 701.3112853052638 7.280156171532187 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA 2.2757 - 179 1 1.496 32552.9 1.0 3247 5203 8445 HBL1_DMSO_200M_050219_1,8452 HBL1_DMSO_200M_050219_1,8452,SFQLHCYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8453 44.568 49.0 1415600.0 25 0 365160.0 + 33292 SFQRNVRSL 9 63 553.8064176284956 1105.5982823237912 2 553.8068115115166 MULTI CID FTMS 0 0 0 8445 1234827.875 1.0 0 0.0 8 Unmodified _SFQRNVRSL_ ENST00000376007.8_1_6:31588511-31590634:+|nuORF 20.41453444215458 0.284085796332423 3 YYG 3 9 27.447 0.0 0.0 2.4826 0.0 0.0 0.0 719.4301969568568 719.4301969568568 5.880456295278407 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 YYG 2.4826 - 23 1 1.496 60143.0 1.0 3248 5203 8445 HBL1_DMSO_200M_050219_1,8453 HBL1_DMSO_200M_050219_1,8453,SFQRNVRSL False True SFQRNVRSL 44.567976 553.806811511517 6244021.5 8445.0 ENST00000376007.8_1_6:31588511-31590634:+|nuORF 2.3185884952545166 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8454 44.57 66.0 1256500.0 25 0 598190.0 -1 0 72 382.1971697693558 381.1898933027558 1 382.1971008181572 MULTI CID FTMS 0 0 0 8445 1005024.5 0.7470904139486185 1 -0.0823860168457031 9 3 SY{I|L} 3 -1 + 55.596 0.0 0.0 14.585 14.585 99.009 0.0 0.0 0.0 37.63721521439797 13.723637474483468 13.723637474483468 33.90131542803174 0 0.5418727718234408 2.0 0.0 0.0 SY{I|L};{[{M(Oxidation (M))|F}C]|[YS]}{I|L};[YT]V 14.585;5.6913;1.5304 -;-;- 13 + 1 1.496 74693.2 1.0 3249 5203 8445 HBL1_DMSO_200M_050219_1,8454 HBL1_DMSO_200M_050219_1,8454, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8455 44.571 48.0 1069200.0 25 0 159930.0 + 11524 GIPEKDLHSV 10 81 365.5330099272893 1093.5772003820678 3 365.5328552126884 MULTI CID FTMS 0 0 0 8445 999497.8125 0.8674899195845066 1 -0.0823860168457031 10 Unmodified _GIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 32.78568957990786 0.2337485590374503 3 {[VA]|[{I|L}G]}PE 4 6 42.677 0.0 0.0 3.9025 0.0 0.0 0.0 694.3534639947874 694.3534639947874 11.584850188786504 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.7742275032520141 0.0 + {[VA]|[{I|L}G]}PE 3.9025 + + 331 + 1 1.496 50447.8 1.0 3250 5203 8445 HBL1_DMSO_200M_050219_1,8455 HBL1_DMSO_200M_050219_1,8455,GIPEKDLHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8456 44.572 46.0 1343900.0 25 0 130600.0 + 4876 DGFKDEATV 9 97 491.2298409409426 980.4451289486852 2 491.2299377322197 MULTI CID FTMS 0 0 0 8445 958833.875 0.3489465284176846 -2 0.1826019287109375 11 Unmodified _DGFKDEATV_ ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3;nc|ENSG00000070915|P55017-3|SLC12A3 17.11289562659939 0.3734572693229295 3 {[TV]|[{I|L}S]}RCCEATV 9 5 {[TV]|[{I|L}S]}RCCEA + + 26.454 9.8869 1.297 2.6981 2.6981 49.649 0.0 0.0 0.0 0.0 7.944043228469972 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}RCCEATV 2.6981 - 173 + 1 1.496 52121.4 1.0 3251 5203 8445 HBL1_DMSO_200M_050219_1,8456 HBL1_DMSO_200M_050219_1,8456,DGFKDEATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8457 44.574 87.0 940430.0 25 0 101480.0 + 21039 LPAASQPQV 9 112 455.7536278381651 909.4927027431302 2 455.7534057497978 MULTI CID FTMS 0 0 0 8445 649333.6875 0.4656889564631564 -2 0.1826019287109375 12 Unmodified _LPAASQPQV_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 70.71552829651908 0.0208223590022201 3 [QP][QT]{I|L} 5 6 38.043 0.0 0.0 4.1829 0.0 0.0 0.0 339.1681621350554 339.1681621350554 15.106485517464485 0.0 0.0 0.0 0 0.9247425010840048 1.0 0.7134679910804405 0.819341519366547 [QP][QT]{I|L} 4.1829 - 523 1 1.496 67762.5 1.0 3252 5203 8445 HBL1_DMSO_200M_050219_1,8457 HBL1_DMSO_200M_050219_1,8457,LPAASQPQV True True LPAASQPQV 44.574016 455.753405749798 7431609.0 8445.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 4.749885400136312 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8458 44.576 92.0 708240.0 25 0 71740.0 + 38153 TPPGAPTLP 9 102 425.7369222145446 849.4592914958893 2 425.7371093630791 MULTI CID FTMS 0 0 0 8445 620245.0 0.9257489961176812 -2 0.1826019287109375 13 Unmodified _TPPGAPTLP_ ENSG00000167992|ENST00000335613|VWCE 48.345845343767074 0.0439967357579942 3 [TP]PGPA{I|L}[TP] 9 3 + 39.883 0.0 0.0 4.6951 4.6951 75.09 0.0 0.0 0.0 15.253312076568903 19.9610548227455 15.253312076568903 2.2454626555970947 0 0.3494850021680094 1.3010299956639813 1.5629529932484498 0.0 [TP]PGPA{I|L}[TP];[TP]PPGA{I|L}[TP];[TP]PGAP{I|L}[TP];[TP]PQP{I|L}[TP];[TP]PPQ{I|L}[TP];{[HG]|PP}TGPA{I|L}[TP];{[HG]|PP}ASPA{I|L}[TP];{[HG]|PP}TPGA{I|L}[TP];[PA]PSPA{I|L}[TP];{[HG]|PP}GPTA{I|L}[TP] 4.6951;4.4307;4.0696;3.9587;3.7298;2.523;2.3333;2.2586;2.0369;2.0151 -;-;-;-;-;-;-;-;-;- 351 1 1.496 55496.7 1.0 3253 5203 8445 HBL1_DMSO_200M_050219_1,8458 HBL1_DMSO_200M_050219_1,8458,TPPGAPTLP True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8459 44.578 103.0 626680.0 25 0 74134.0 + 37021 TFQSTKAVY 9 112 522.7712308916193 1043.5279088500386 2 522.7718383669853 MULTI CID FTMS 0 0 0 8445 525194.3125 0.544869693344078 1 -0.0823860168457031 14 Unmodified _TFQSTKAVY_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7687207-7690948:-|nuORF 43.77239144664712 0.0547478964384323 3 [KT]SAGAVYT{M(Oxidation (M))|F} 10 6 + 34.619 0.0 0.0 3.3175 3.3175 73.401 0.0 0.0 0.0 6.242209500285014 8.49530231754364 6.242209500285014 3.5218251811136234 0 0.218765315847925 0.0 1.055462187404089 0.805462187404089 [KT]SAGAVYT{M(Oxidation (M))|F};[KT]SAQVYT{M(Oxidation (M))|F};[KT]SAVQYT{M(Oxidation (M))|F};[QA]VAQVAQET;[KT]SQAVYT{M(Oxidation (M))|F};[KT]SAV[AG]YT{M(Oxidation (M))|F};{[VA]|[{I|L}G]}QAQVAQET;[YV]{M(Oxidation (M))|F}{I|L}GTPT{M(Oxidation (M))|F};[YV]{M(Oxidation (M))|F}{I|L}G[PS]VY;[{M(Oxidation (M))|F}T][VP]AVYT{M(Oxidation (M))|F} 3.3175;2.98;2.9295;2.3987;2.3267;2.0471;1.9547;1.8818;1.7253;1.7247 -;-;-;-;-;-;-;-;-;- 859 1 1.496 55920.4 1.0 3254 5203 8445 HBL1_DMSO_200M_050219_1,8459 HBL1_DMSO_200M_050219_1,8459,TFQSTKAVY True True TFQSTKAVY 44.578251 522.771838366985 5146014.0 8445.0 ENST00000595288.5_1_19:7687207-7690948:-|nuORF;;ENSG00000076924|ENST00000358368|XAB2 3.69158673286438 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8460 44.58 84.0 720730.0 25 0 76458.0 + 43100 VYNVTQHAV 9 87 515.7692635039208 1029.5239740746415 2 515.7697631716728 MULTI CID FTMS 0 0 0 8445 416573.09375 0.2775420476960432 -2 0.1826019287109375 15 Unmodified _VYNVTQHAV_ ENSG00000122026|ENST00000311549|RPL21;ENST00000397467.2_1_3:1947466-1947595:+|nuORF;ENST00000483765.5_1_13:27827977-27830662:+|nuORF;ENST00000488408.1_1_3:153741662-153741884:+|nuORF 40.23920728925047 0.0741434193262949 3 [YV]NVTQ[HA]V 9 0 + 60.345 0.0 0.0 5.8614 5.8614 87.316 0.0 0.0 0.0 31.01342204748164 0.915149811213496 0.915149811213496 9.208187539523747 0 0.9247425010840048 2.0 0.3494850021680094 0.7302046884880937 + + [YV]NVTQ[HA]V;[YV]GGVTQ[HA]V;[YV]NVT[AG][HA]V;[YV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GAYVV;[YV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QYVV;[PA]{[RE]|[WV]}TVN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GS{M(Oxidation (M))|F}VV;[PA]{[RE]|[WV]}TVGG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[HA]GTAVNYVV;[HQ]TVNAYVV 5.8614;4.967;4.6703;3.0986;2.9328;2.7623;2.6352;1.8679;1.8505;1.758 +;-;-;-;-;-;-;-;-;- + 845 + 1 1.496 54963.0 1.0 3255 5203 8445 HBL1_DMSO_200M_050219_1,8460 HBL1_DMSO_200M_050219_1,8460,VYNVTQHAV True True VYNVTQHAV 44.580151 515.769763171673 17044120.0 8445.0 ENST00000483765.5_1_13:27827977-27830662:+|nuORF;;ENST00000397467.2_1_3:1947466-1947595:+|nuORF;;ENSG00000122026|ENST00000311549|RPL21;;ENST00000488408.1_1_3:153741662-153741884:+|nuORF 7.993188381195068 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8461 44.585 280.0 373150.0 25 0 51721.0 + -1 ENMDVMCGV 9 118 543.6981983096674 1085.3818436861347 2 543.6985961794853 MULTI CID FTMS 0 0 0 8445 306471.84375 1.0 0 0.0 16 Carbamidomethyl (C),2 Oxidation (M) _ENM(Oxidation (M))DVM(Oxidation (M))C(Carbamidomethyl (C))GV_ REV__ENSG00000198626|ENST00000366574|RYR2;REV__nc|ENSG00000198626|Q92736-2|RYR2 12.531546534597751 0.4974689918368763 3 [VS]N[{I|L}A]VQY 8 -1 39.328 0.0 0.0 3.6234 0.0 0.0 0.0 207.89125926108616 207.89125926108616 15.471613889780931 0.0 0.0 0.0 0 0.0 2.0 0.6549471895720984 0.3807196863200844 [VS]N[{I|L}A]VQY 3.6234 - 373 1 1.496 86710.8 1.0 3256 5203 8445 HBL1_DMSO_200M_050219_1,8461 HBL1_DMSO_200M_050219_1,8461,ENMDVMCGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8462 44.596 617.0 171160.0 25 0 11782.0 + 33233 SFNCLWRGYS 10 122 616.7787446464536 1231.542936359707 2 616.7790405154228 MULTI CID FTMS 0 0 0 8445 305615.28125 0.5582074168375779 1 -0.0823860168457031 17 Unmodified _SFNCLWRGYS_ REV__ENSG00000149639|ENST00000237536|SOGA1;REV__nc|ENSG00000149639|O94964-1|MTCL2;REV__nc|ENSG00000149639|O94964-3|MTCL2 22.736283301280096 0.4578556481593033 3 [QP][YT]GPMN 8 -1 37.049 0.0 0.0 3.0083 0.0 0.0 0.0 340.1293337434641 340.1293337434641 3.600300123746223 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.6694451763165201 [QP][YT]GPMN 3.0083 - 2473 1 1.496 81158.9 1.0 3257 5203 8445 HBL1_DMSO_200M_050219_1,8462 HBL1_DMSO_200M_050219_1,8462,SFNCLWRGYS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8463 44.61 800.0 222280.0 25 0 12938.0 + 35157 SRPDSILGMQF 11 155 633.8106223050883 1265.6066916769764 2 633.8106567263603 MULTI CID FTMS 0 0 0 8445 156889.359375 0.0304794415676859 -4 0.3445549011230469 18 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 51.629811660486645 0.1086041609037681 3 [AG]K{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 11 -1 + 109.87 0.0 0.0 8.6813 8.6813 83.175 0.0 0.0 0.0 12.262135550188049 16.575773191777927 12.262135550188049 0.6687674038007998 0 1.079689690656103 1.5228787452803376 1.3001648626366045 2.5673851849885576 [AG]K{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}QEQA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[AG]K{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQEQA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[AG]{I|L}KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 8.6813;8.6284;7.96;7.96;7.96;7.9071;7.9071;7.9071;7.7124;7.6595 -;-;-;-;-;-;-;-;-;- 5574 1 1.496 133484.0 0.9800000190734864 3258 5203 8445 HBL1_DMSO_200M_050219_1,8463 HBL1_DMSO_200M_050219_1,8463,SRPDSILGMQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8464 44.624 800.0 201390.0 25 0 15685.0 + 32598 SAVTQVAKV 9 186 451.769039532772 0 451.7692138552666 PEAK CID FTMS 0 0 0 8445 137333.8125 1.0 0 0.0 19 Unmodified _SAVTQVAKV_ ENSG00000092108|ENST00000458591|SCFD1;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1 39.94969957227396 0.061964645358372 3 VTQVA 5 4 18.83 0.0 0.0 2.0887 0.0 0.0 158.07041441535017 242.1514376276 400.2218520429502 0.0 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.3252574989159953 + VTQVA 2.0887 + + 246 + 1 1.496 125703.7 0.7900000214576721 3259 5203 8445 HBL1_DMSO_200M_050219_1,8464 HBL1_DMSO_200M_050219_1,8464,SAVTQVAKV True True SAVTQVAKV 44.623741 451.769213855267 799066.5 8445.0 nc|ENSG00000092108|Q8WVM8-2|SCFD1;;nc|ENSG00000092108|Q8WVM8-3|SCFD1;;ENSG00000092108|ENST00000458591|SCFD1 6.100285053253174 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8465 44.638 800.0 65425.0 25 0 3025.0 -1 0 61 717.3212255399148 3581.569745366574 5 717.9231445193291 MULTI CID FTMS 0 0 0 8445 112196.875 0.6224900921381736 -2 0.1826019287109375 20 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 12 1 1.496 47517.8 0.800000011920929 3260 5203 8445 HBL1_DMSO_200M_050219_1,8465 HBL1_DMSO_200M_050219_1,8465, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8467 44.654 800.0 142910.0 25 0 14054.0 + 33237 SFNMLCENYR 10 128 638.7758670296989 0 638.7744628787041 PEAK CID FTMS 0 0 0 8466 61324.94921875 0.6038566436248168 1 -0.0167350769042968 1 Unmodified _SFNMLCENYR_ REV__ENSG00000138767|ENST00000504123|CNOT6L;REV__nc|ENSG00000138767|Q96LI5-2|CNOT6L 18.1463463914782 0.3130158145628772 3 YPY 3 -1 19.693 0.0 0.0 1.5439 0.0 0.0 185.08401487264115 664.2551973932249 849.3392122658661 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 YPY 1.5439 - 89 + 1 1.499 87133.3 0.7799999713897705 3261 5204 8466 HBL1_DMSO_200M_050219_1,8467 HBL1_DMSO_200M_050219_1,8467,SFNMLCENYR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8469 44.659 6.2 8713800.0 25 0 837100.0 + 44773 YPLSKAQTV 9 95 503.78250582572656 1005.5504587182533 2 503.7819091677666 MULTI CID FTMS 0 0 0 8468 9028782.0 0.9043494861790649 -2 0.09912109375 1 Unmodified _YPLSKAQTV_ ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3 68.08070601005525 0.0218408846571049 3 YP{I|L}S 4 5 67.423 0.0 0.0 6.7051 0.0 0.0 0.0 542.2943209283811 542.2943209283811 48.91773141135175 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.274227503252014 0.0 + YP{I|L}S 6.7051 + + 241 + 1 1.499 46808.9 1.0 3262 5205 8468 HBL1_DMSO_200M_050219_1,8469 HBL1_DMSO_200M_050219_1,8469,YPLSKAQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8470 44.66 19.0 2417700.0 25 0 280320.0 + 2422 AQQPTAVQV 9 86 471.25595438753953 940.4973558418792 2 471.2563354372978 MULTI CID FTMS 0 0 0 8468 3016177.75 0.4276992617588563 3 -0.276031494140625 2 Unmodified _AQQPTAVQV_ ENSG00000066136|ENST00000447388|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 52.268347100219714 0.0353964759249114 3 [QA]QA[TP]VQV 9 2 + 38.891 0.0 0.0 4.1352 4.1352 74.575 0.0 0.0 0.0 6.040288287602159 24.21204671777453 6.040288287602159 3.0102999566398125 0 0.8737125054200234 0.0 0.8494850021680094 0.6307196863200843 [QA]QA[TP]VQV;[QA]GAA[TP]VQV;QQAA[TP]VQV;{[VA]|[{I|L}G]}G[NG][TP]VQV;{[VA]|[{I|L}G]}[TP]AGAQQV;{[QG]|[NA]}AAA[TP]VQV;{[QV]|[N{I|L}]|[RA]|[KV]}[NG][TP]VQV;{[VA]|[{I|L}G]}[TP]QAQQV;{[TV]|[{I|L}S]}[PA]AGAQQV;{[VA]|[{I|L}G]}[TP]AQQQV 4.1352;3.8151;3.3031;3.1833;2.9573;2.8903;2.8889;2.8744;2.2999;2.2759 -;-;-;-;-;-;-;-;-;- 578 1 1.499 45321.6 1.0 3263 5205 8468 HBL1_DMSO_200M_050219_1,8470 HBL1_DMSO_200M_050219_1,8470,AQQPTAVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8471 44.661 53.0 639720.0 25 0 79340.0 -1 NALVCDCDLM 10 65 556.7238679276599 1111.4331829221196 2 556.7247192263603 MULTI CID FTMS 0 0 0 8468 729454.875 1.0 0 0.0 3 Oxidation (M) _NALVCDCDLM(Oxidation (M))_ ENSG00000147485|ENST00000356297|PXDNL;nc|ENSG00000147485|A1KZ92-2|PXDNL 6.723162845929126 0.6955379296933136 3 {[QG]|[NA]}{I|L} 3 -1 29.749 0.0 0.0 2.6767 0.0 0.0 0.0 810.2454442348727 810.2454442348727 21.790521660407123 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3807196863200844 {[QG]|[NA]}{I|L} 2.6767 + + 16 1 1.499 31087.2 1.0 3264 5205 8468 HBL1_DMSO_200M_050219_1,8471 HBL1_DMSO_200M_050219_1,8471,NALVCDCDLM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8472 44.664 159.0 748210.0 25 0 79972.0 6699 ECLFLAVM 8 119 463.2311693116779 924.4477856901558 2 463.2304260134697 MULTI CID FTMS 0 0 0 8468 563582.3125 0.0220582319787864 -2 0.09912109375 4 Unmodified _ECLFLAVM_ ENSG00000176198|ENST00000641082|OR11H4;nc|ENSG00000176198|Q8NGC9|OR11H4 19.438996006549623 0.6237395211498085 3 NVM 3 6 31.22 0.0 0.0 3.3771 0.0 0.0 562.2817833481621 0.0 562.2817833481621 0.0 20.382366957183883 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 NVM 3.3771 - 333 + 1 1.499 94694.5 1.0 3265 5205 8468 HBL1_DMSO_200M_050219_1,8472 HBL1_DMSO_200M_050219_1,8472,ECLFLAVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8473 44.666 95.0 852960.0 25 0 199010.0 28727 PVVAAAQPA 9 95 412.2372008482531 822.4598487633062 2 412.2372009158134 MULTI CID FTMS 0 0 0 8468 499841.5625 1.0 0 0.0 5 Unmodified _PVVAAAQPA_ ENSG00000160877|ENST00000292431|NACC1 34.18733598223924 0.1073653526364521 3 AAATP 5 5 33.415 0.0 0.0 4.0628 0.0 0.0 0.0 408.2338249933451 408.2338249933451 0.4393301451261138 0.0 0.0 0.0 0 0.6203715150305281 1.3979400086720375 0.3054621874040891 0.0 AAATP 4.0628 - 463 1 1.499 69169.0 1.0 3266 5205 8468 HBL1_DMSO_200M_050219_1,8473 HBL1_DMSO_200M_050219_1,8473,PVVAAAQPA True False AAAPVVPQA 44.66648 412.237200915813 4178367.5 8468.0 ENSG00000120265|ENST00000464889|PCMT1;;nc|ENSG00000120265|P22061-2|PCMT1 3.6564926306406655 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8474 44.676 540.0 423970.0 25 0 26610.0 + -1 NVKVDPEIQ 9 197 521.6910799804567 1041.3676070277131 2 521.6916992068291 MULTI CID FTMS 0 0 0 8468 418082.21875 0.2298740800315822 6 -0.5965614318847656 6 Oxidation (M) _M(Oxidation (M))ECHSWSF_ P35908;P35908v2;ENSG00000172867|ENST00000309680|KRT2 26.34127834903884 0.4900704351052977 3 SPS{M(Oxidation (M))|F} 4 -1 43.945 0.0 0.0 4.22 0.0 0.0 605.1740791013976 0.0 605.1740791013976 0.0 22.81743128760553 0.0 0.0 0 0.9247425010840048 0.0 1.2302046884880935 0.0 SPS{M(Oxidation (M))|F} 4.22 - 493 1 1.499 178156.7 1.0 3267 5205 8468 HBL1_DMSO_200M_050219_1,8474 HBL1_DMSO_200M_050219_1,8474,MECHSWSF False False NVKVDPEIQ 44.675972 521.691699206829 1942905.875 8468.0 P35908;;P35908v2;;ENSG00000172867|ENST00000309680|KRT2 -0.2916373014450073 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8475 44.678 102.0 422760.0 25 0 64431.0 -1 0 72 415.2542741078307 414.24699764123073 1 415.2538635134697 MULTI CID FTMS 0 0 0 8468 401765.53125 0.4428910365502574 -4 0.2817230224609375 7 3 {M(Oxidation (M))|F} 1 -1 10.379 0.0 0.0 2.5054 0.0 0.0 249.2037064808776 0.0 249.2037064808776 0.0 5.660116073527027 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.5054 - 10 + 1 1.499 40092.6 1.0 3268 5205 8468 HBL1_DMSO_200M_050219_1,8475 HBL1_DMSO_200M_050219_1,8475, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8476 44.682 189.0 532490.0 25 0 51391.0 + 45469 YTIPPGHQV 9 109 506.2657893940363 1010.5170258548726 2 506.2655517458916 MULTI CID FTMS 0 0 0 8468 367846.0625 0.805355749691451 -2 0.09912109375 8 Unmodified _YTIPPGHQV_ ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;ENST00000492267.1_1_3:82855892-82856129:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1 25.399314129420983 0.2080152500878129 3 [YT]{I|L}P[YQ]N{I|L} 8 5 + 40.245 0.0 0.0 3.9827 3.9827 70.064 0.0 0.0 0.0 27.481265248739213 3.818800056340805 3.818800056340805 0.5237875363565792 0 0.4247425010840047 1.5228787452803376 0.0 0.1595680409956017 [YT]{I|L}P[YQ]N{I|L};[YT]{I|L}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{I|L};[YT]{I|L}P[PG]HN{I|L};[YT]{I|L}P[YQ]QV;[YT]{I|L}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QV;[{I|L}P]YYP{I|L}[{M(Oxidation (M))|F}V];[YT]{I|L}P[PG]HQV;[YT][RN]V{I|L}[{M(Oxidation (M))|F}V];[YT]{I|L}[AG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{I|L};[YT]{I|L}P[YQ]GG{I|L} 3.9827;3.9308;3.6341;3.6013;3.5495;3.2777;3.2528;3.126;3.0143;2.9082 -;-;-;-;-;-;+;-;-;- + 292 + 1 1.499 80532.7 1.0 3269 5205 8468 HBL1_DMSO_200M_050219_1,8476 HBL1_DMSO_200M_050219_1,8476,YTIPPGHQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8477 44.694 715.0 621460.0 25 0 68743.0 -1 YVNYDCDL 8 211 531.2146828243633 1060.4148127155263 2 531.2155639529228 MULTI CID FTMS 0 0 0 8468 249772.734375 0.5882903125088784 1 -0.1035728454589843 9 Carbamidomethyl (C) _YVNYDC(Carbamidomethyl (C))DL_ ENSG00000066777|ENST00000262215|ARFGEF1;ENSG00000124198|ENST00000371917|ARFGEF2 28.486842064014134 0.4448922141344407 3 {I|L}EDN 4 -1 54.346 0.0 0.0 5.125 0.0 0.0 0.0 586.1943092247114 586.1943092247114 14.223025417617158 0.0 0.0 0.0 0 0.1861818737241735 0.744727494896694 0.2742275032520141 1.1861818737241734 {I|L}EDN 5.125 - 1626 + 1 1.499 336160.1 1.0 3270 5205 8468 HBL1_DMSO_200M_050219_1,8477 HBL1_DMSO_200M_050219_1,8477,YVNYDCDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8478 44.697 110.0 557550.0 25 0 101290.0 34272 SLQRATFF 8 92 485.26209996046543 0 485.2619811892509 PEAK CID FTMS 0 0 0 8468 248213.859375 0.7409303966924171 2 -0.2120857238769531 10 Unmodified _SLQRATFF_ ENSG00000278870|ENST00000623849|OR51G1 7.910154910731844 0.5650536163073903 3 A 1 7 6.9897 0.0 0.0 0.7217 0.0 0.0 258.1073775558934 636.3523653619749 894.4597429178682 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.7217 + + 25 + 1 1.499 53785.2 1.0 3271 5205 8468 HBL1_DMSO_200M_050219_1,8478 HBL1_DMSO_200M_050219_1,8478,SLQRATFF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8479 44.701 266.0 438770.0 25 0 33496.0 + 45555 YVDEEMYV 8 159 524.2188329656035 1046.423112998007 2 524.2191039919853 MULTI CID FTMS 0 0 0 8468 233933.25 0.5254590075916378 1 -0.1035728454589843 11 Unmodified _YVDEEMYV_ REV__ENSG00000149639|ENST00000237536|SOGA1;REV__nc|ENSG00000149639|O94964-1|MTCL2;REV__nc|ENSG00000149639|O94964-4|MTCL2 14.581692164780916 0.6954967302934248 3 NE{I|L} 3 -1 26.682 0.0 0.0 2.5499 0.0 0.0 672.2454745911629 0.0 672.2454745911629 0.0 -0.061216379505069 -0.061216379505069 0.0 0 0.3494850021680094 0.0 0.0 0.0 NE{I|L} 2.5499 - 488 1 1.499 95081.0 1.0 3272 5205 8468 HBL1_DMSO_200M_050219_1,8479 HBL1_DMSO_200M_050219_1,8479,YVDEEMYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8480 44.715 800.0 249820.0 25 0 20729.0 + 35137 SQYSGQLHEV 10 187 574.2721796208377 1146.5298063084754 2 574.2725707888603 MULTI CID FTMS 0 0 0 8468 172807.828125 0.5936677344028373 -1 0.0167350769042968 12 Unmodified _SQYSGQLHEV_ ENSG00000144645|ENST00000396556|OSBPL10;ENST00000466604.5_1_3:31863684-32001816:-|nuORF 61.60191391372663 0.0323840705564037 3 {[QS]|[NT]}YGH{I|L}EVQS 10 5 + 72.775 0.0 0.0 6.3474 6.3474 83.656 0.0 0.0 0.0 24.423443315190347 61.08017516893504 24.423443315190347 4.273174902439578 0 1.218765315847925 1.2218487496163564 0.8609243748081783 0.9916440611282626 {[QS]|[NT]}YGH{I|L}EVQS;{[QS]|[NT]}YSVSYVQS;{[QS]|[NT]}YGH{I|L}EV[AG]S;{[QS]|[NT]}YSVSVYQS;{[QS]|[NT]}YSVSYV[AG]S;{[QS]|[NT]}GYH{I|L}EVQS;{[QS]|[NT]}G[H{I|L}]YEVQS;{[QS]|[NT]}G[H{I|L}]EYVQS;{[QS]|[NT]}Y[VP][HC]VQS;{[QS]|[NT]}YSVSVY[AG]S 6.3474;5.9747;5.5481;5.2956;5.1754;5.1443;5.0963;4.9427;4.7837;4.4962 -;-;-;-;-;-;-;-;-;- 3770 1 1.499 147713.9 0.959999978542328 3273 5205 8468 HBL1_DMSO_200M_050219_1,8480 HBL1_DMSO_200M_050219_1,8480,SQYSGQLHEV True True SQYSGQLHEV 44.715271 574.27257078886 1972315.0 8468.0 ENST00000466604.5_1_3:31863684-32001816:-|nuORF;;ENSG00000144645|ENST00000396556|OSBPL10 6.91511074701945 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8481 44.73 800.0 215120.0 25 0 15370.0 + 40304 VGVSSPLP 8 177 378.2183479022105 754.422142871221 2 378.2194091677666 MULTI CID FTMS 0 0 0 8468 155500.546875 1.0 0 0.0 13 Unmodified _VGVSSPLP_ REV__ENST00000507707.1_1_5:42466060-42468762:-|nuORF 20.871210003555333 0.6025813472596342 3 SPADK 5 -1 33.777 0.0 0.0 4.4773 0.0 0.0 238.167074480284 0.0 238.167074480284 0.0 19.13864050585181 0.0 0.0 0 0.7059771852360797 0.0 0.5866968715561641 0.2134679910804404 SPADK 4.4773 - 141 + 1 1.499 136924.0 0.6399999856948853 3274 5205 8468 HBL1_DMSO_200M_050219_1,8481 HBL1_DMSO_200M_050219_1,8481,VGVSSPLP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8482 44.744 800.0 37522.0 25 0 8009.5 -1 0 26 1163.804370105267 0 1163.804370105267 PEAK CID FTMS 0 0 0 -1 0 14 3 E 1 -1 5.4846 0.0 0.0 0.23583 0.0 0.0 1669.3668674478974 524.1599825494749 2193.526849997372 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.23583 - 3 + 1 1.499 34119.9 0.4600000083446502 3275 5205 8468 HBL1_DMSO_200M_050219_1,8482 HBL1_DMSO_200M_050219_1,8482, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8483 44.758 800.0 172490.0 25 0 14675.0 + 15707 IQTDPNSNDGL 11 163 587.27294806495 1172.5313431967 2 587.2727538943291 MULTI CID FTMS 0 0 0 8468 106037.25 0.239723047589927 -2 0.09912109375 15 Unmodified _IQTDPNSNDGL_ ENSG00000170558|ENST00000269141|CDH2;nc|ENSG00000170558|P19022-2|CDH2 47.594388314883695 0.1309523012099263 3 [Q{I|L}]TDEEH 7 7 32.668 0.0 0.0 2.7861 0.0 0.0 0.0 317.1422190114062 317.1422190114062 3.4539349866662405 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.6505149978319906 0.8494850021680094 [Q{I|L}]TDEEH 2.7861 - 2085 1 1.499 104159.8 0.7200000286102295 3276 5205 8468 HBL1_DMSO_200M_050219_1,8483 HBL1_DMSO_200M_050219_1,8483,IQTDPNSNDGL False True IQTDPNSNDGL 44.757957 587.272753894329 2914930.75 8468.0 nc|ENSG00000170558|P19022-2|CDH2;;ENSG00000170558|ENST00000269141|CDH2 6.996805032094319 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8485 44.762 13.0 3605200.0 25 0 694720.0 + 41741 VPTDPPRTI 9 61 498.2796454378588 994.5447379425176 2 498.2795287966728 MULTI CID FTMS 0 0 0 8484 3343277.25 0.2864363665368628 4 -0.3792610168457031 1 Unmodified _VPTDPPRTI_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 24.99096001346401 0.2132109383330889 3 VPTDP 5 4 61.995 0.0 0.0 6.2335 0.0 0.0 0.0 482.27411829166255 482.27411829166255 32.18404217687025 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.0 0.0 + VPTDP 6.2335 + + 45 + 1 1.499 44861.8 1.0 3277 5206 8484 HBL1_DMSO_200M_050219_1,8485 HBL1_DMSO_200M_050219_1,8485,VPTDPPRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8486 44.763 23.0 1778600.0 25 0 184850.0 + 41290 VPHTRPVSL 9 71 335.8662583152137 1004.5769455458412 3 335.8660156130791 MULTI CID FTMS 0 0 0 8484 1655651.875 0.4187945691209769 1 -0.1085128784179687 2 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 27.628801355627647 0.1796483985696185 3 DPV{I|L} 4 6 25.618 0.0 0.0 2.5501 0.0 0.0 562.3345833581942 0.0 562.3345833581942 0.0 1.0403972069151737 0.0 0.0 0 0.3182503180159344 0.0 0.9247425010840048 0.0 DPV{I|L} 2.5501 - 76 1 1.499 38775.2 1.0 3278 5206 8484 HBL1_DMSO_200M_050219_1,8486 HBL1_DMSO_200M_050219_1,8486,VPHTRPVSL False True VPHTRPVSL 44.763465 335.866015613079 26386394.0 8484.0 ENST00000412609.5_1_19:40170059-40174276:+|nuORF 6.520315170288086 3.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8487 44.765 13.0 3987300.0 25 0 415310.0 + 5747 DPNKQVIRV 9 80 534.8118114801339 0 534.8117553591728 PEAK CID FTMS 0 0 0 8484 3901793.75 0.4785757644370219 -1 0.1035728454589843 3 Unmodified _DPNKQVIRV_ ENSG00000100353|ENST00000216190|EIF3D;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 30.63653989081413 0.1077493867305487 3 PNKQV{I|L} 6 3 34.954 0.0 0.0 3.274 0.0 0.0 115.0267719798157 270.15720544986567 385.18397742968136 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + PNKQV{I|L} 3.274 + + 109 + 1 1.499 43909.4 1.0 3279 5206 8484 HBL1_DMSO_200M_050219_1,8487 HBL1_DMSO_200M_050219_1,8487,DPNKQVIRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8488 44.766 73.0 472370.0 25 0 25978.0 -1 0 87 494.26241919476536 493.25514272816537 1 494.2631103396416 MULTI CID FTMS 0 0 0 8484 330077.4375 0.510915549027002 -1 0.1035728454589843 4 3 [{I|L}T]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 4 -1 + 20.062 0.0 0.0 4.0672 4.0672 74.838 0.0 0.0 0.0 1.9145437882747984 1.9145437882747984 1.9145437882747984 3.163931154357797 0 0.2614393726401688 1.3979400086720375 0.0 0.0 [{I|L}T]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T{I|L};{[VA]|[{I|L}G]}S{[MS]|[{M(Oxidation (M))|F}A]};[YV]NV 4.0672;3.4258;2.1027;1.4064 -;-;-;- 72 1 1.499 30105.7 1.0 3280 5206 8484 HBL1_DMSO_200M_050219_1,8488 HBL1_DMSO_200M_050219_1,8488, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8489 44.778 697.0 333960.0 25 0 38042.0 + 37979 TNEYVCTNY 9 164 553.724360109036 1105.4341672848718 2 553.7252685427666 MULTI CID FTMS 0 0 0 8484 269307.8125 0.0672896830517996 13 -1.1341018676757812 5 Unmodified _TNEYVCTNY_ REV__ENSG00000165323|ENST00000525166|FAT3;REV__nc|ENSG00000165323|Q8TDW7|FAT3 36.12702656103203 0.0967173616627612 3 YYGSQYYY 8 -1 + 62.542 0.0 0.0 5.6577 5.6577 88.011 0.0 0.0 0.0 11.539233745591446 5.172203223519531 5.172203223519531 11.539233745591446 0 0.8182503180159344 2.0 1.1237125054200234 0.6747425010840047 YYGSQYYY;[DP]NGSQYYY;[DP]GGGSQYYY;YYGSQ[MD][VG]S;YYGS[AG]YYY;[DP]GNSQYYY;[DP]NGS[AG]YYY;[NP]DGSQYYY;{I|L}{[QC]|[C(Carbamidomethyl (C))A]}YQS{[DS]|[MA]|[CV]|TT}Y;YYGS[YE][HT]S 5.6577;4.6138;4.4433;4.2366;4.2094;3.8892;3.7808;3.5382;3.422;3.3112 -;-;-;-;-;-;-;-;-;- 2485 1 1.499 178370.6 1.0 3281 5206 8484 HBL1_DMSO_200M_050219_1,8489 HBL1_DMSO_200M_050219_1,8489,TNEYVCTNY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8490 44.783 242.0 789310.0 25 0 79259.0 + 3884 DALDHYKTV 9 137 531.2663050546146 1060.518057176029 2 531.2667114138603 MULTI CID FTMS 0 0 0 8484 242007.640625 0.7785540564260953 -1 0.1035728454589843 6 Unmodified _DALDHYKTV_ ENSG00000203485|ENST00000392634|INF2;nc|ENSG00000203485|Q27J81-2|INF2;nc|ENSG00000203485|Q27J81-3|INF2 57.24910588100465 0.0276051374632116 3 {[DA]|[EG]}{I|L}DHYKTV 9 0 + 57.353 0.0 0.0 5.408 5.408 81.591 0.0 0.0 0.0 10.737862141609185 7.525749891599531 7.525749891599531 5.044774213264631 0 2.059894379144197 2.0 0.5941876774005248 0.0 + + {[DA]|[EG]}{I|L}DHYKTV;{[DA]|[EG]}VEHYKTV;{[DA]|[EG]}{I|L}DHYKVT;{[DA]|[EG]}{I|L}DHYKS{I|L};{[DA]|[EG]}VEHYKVT;{[DA]|[EG]}VEHYKS{I|L};{[DA]|[EG]}{I|L}DHYTKV;{[DA]|[EG]}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}[PS]KTV;{[DA]|[EG]}VEHYTKV;{[DA]|[EG]}V[MN][PS]KTV 5.408;4.9323;4.6984;4.5655;4.2227;4.0898;3.9945;3.8836;3.5188;3.4079 +;-;-;-;-;-;-;-;-;- + 1664 + 1 1.499 148748.9 1.0 3282 5206 8484 HBL1_DMSO_200M_050219_1,8490 HBL1_DMSO_200M_050219_1,8490,DALDHYKTV True True DALDHYKTV 44.782977 531.26671141386 6261800.5 8484.0 ENSG00000203485|ENST00000392634|INF2;;nc|ENSG00000203485|Q27J81-2|INF2;;nc|ENSG00000203485|Q27J81-3|INF2 5.7779897054036455 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8491 44.785 99.0 492240.0 25 0 53180.0 + -1 VYVCMCVV 8 84 523.230136354561 1044.4457197759218 2 523.2287475466728 MULTI CID FTMS 0 0 0 8484 232242.96875 0.7400630924878833 2 -0.1724586486816406 7 2 Carbamidomethyl (C),Oxidation (M) _VYVC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))VV_ REV__HAL1_dup21739|chr20:4024584-4025416:+|1.0515913160234027|0.1385400223363406|2.92|48.0|40|1|anti-sense 17.086550045450526 0.6584923310065985 3 VYNA{[WT]|[RM]}EY 8 -1 + 64.563 0.0 0.0 6.1815 6.1815 86.412 0.0 0.0 0.0 51.06791285705228 4.129712596891153 4.129712596891153 7.65153777800478 0 0.4247425010840047 2.0 0.3494850021680094 0.4247425010840047 VYNA{[WT]|[RM]}EY;VYN{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[ET]|[MV]}{M(Oxidation (M))|F};VYGGA{[WT]|[RM]}EY;VYN{[WS]|[C(Carbamidomethyl (C)){I|L}]}[DV]Y;VYN{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}V 6.1815;5.4489;5.2947;5.2045;4.9163 -;-;-;-;- 95 + 1 1.499 45169.2 1.0 3283 5206 8484 HBL1_DMSO_200M_050219_1,8491 HBL1_DMSO_200M_050219_1,8491,VYVCMCVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8492 44.792 402.0 452800.0 25 0 45264.0 + -1 PGLANACCV 9 160 481.2148752105669 960.4151974879336 2 481.2151367068291 MULTI CID FTMS 0 0 0 8484 183790.1875 0.2757730201599452 -3 0.2026939392089843 8 2 Carbamidomethyl (C) _PGLANAC(Carbamidomethyl (C))C(Carbamidomethyl (C))V_ REV__ENST00000558165.3_1_15:76552958-76553450:-|nuORF 16.942295170755138 0.3780752226737986 3 {I|L}PG 3 -1 31.044 0.0 0.0 3.2324 0.0 0.0 0.0 690.2386568658811 690.2386568658811 2.095354244648078 0.0 0.0 0.0 0 0.1747425010840047 1.0 0.0 0.0 {I|L}PG 3.2324 - 653 + 1 1.499 140140.0 1.0 3284 5206 8484 HBL1_DMSO_200M_050219_1,8492 HBL1_DMSO_200M_050219_1,8492,PGLANACCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8493 44.806 800.0 298100.0 25 0 21585.0 + 1998 APALAQPLV 9 221 440.2684194222457 878.5222859112914 2 440.2687255740166 MULTI CID FTMS 0 0 0 8484 177136.875 0.3454691449632872 1 -0.1085128784179687 9 Unmodified _APALAQPLV_ REV__ENSG00000164900|ENST00000297537|GBX1 42.09456458481378 0.0639583784996157 3 APAP[PS]KV{I|L} 9 -1 + 65.142 0.0 0.0 7.4149 7.4149 83.783 0.0 0.0 0.0 20.33809673312028 2.340832060333668 2.340832060333668 2.340832060333668 0 1.6382104921644451 1.6989700043360187 0.0 0.0 APAP[PS]KV{I|L};APAP[PS]K{I|L}V;APAAQ[{I|L}P]V{I|L};APAAQ[{I|L}P]{I|L}V;[PA]AAVAPAV{I|L};APAP[PS][{I|L}V]K;[PA]AVAAPAV{I|L};[PA]AP[Q{I|L}]AV{I|L};[PA]AP[KP]SV{I|L};[PA]A{I|L}QPAV{I|L} 7.4149;7.1485;5.6012;5.3348;5.0999;5.0457;5.0339;4.8623;4.6619;4.3187 -;-;-;-;-;-;-;-;-;- 949 + 1 1.499 181151.1 0.7799999713897705 3285 5206 8484 HBL1_DMSO_200M_050219_1,8493 HBL1_DMSO_200M_050219_1,8493,APALAQPLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8494 44.811 292.0 228380.0 25 0 21008.0 25944 NLPCTYDPLQ 10 91 582.2749732813174 1162.5353936294348 2 582.2774536013603 MULTI CID FTMS 0 0 0 8484 143156.65625 1.0 0 0.0 10 Unmodified _NLPCTYDPLQ_ ENSG00000155659|ENST00000374737|VSIG4;nc|ENSG00000155659|Q9Y279-2|VSIG4;nc|ENSG00000155659|Q9Y279-3|VSIG4 31.26834338654808 0.266153677697784 3 [YQ][RH][DG]{M(Oxidation (M))|F}{I|L}Q 9 7 [YQ][RH][DG]{M(Oxidation (M))|F} + + 36.198 -5.5326 -0.61244 3.1137 3.1137 50.431 0.0 0.0 0.0 0.0 2.733827801468145 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.6421590589602533 [YQ][RH][DG]{M(Oxidation (M))|F}{I|L}Q 3.1137 - 184 + 1 1.499 56158.9 1.0 3286 5206 8484 HBL1_DMSO_200M_050219_1,8494 HBL1_DMSO_200M_050219_1,8494,NLPCTYDPLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8495 44.817 319.0 277570.0 25 0 11764.0 + 16398 IYQSKVREL 9 102 568.3270181633135 1134.6394833934269 2 568.3268310427666 MULTI CID FTMS 0 0 0 8484 134496.5625 0.5350622352087533 -4 0.2958335876464844 11 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 40.23920728925047 0.0741434193262949 3 {I|L}YQSKV 6 3 76.216 0.0 0.0 6.7172 0.0 0.0 0.0 413.2161043756469 413.2161043756469 65.1072158606037 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7059771852360797 0.4247425010840047 + {I|L}YQSKV 6.7172 + + 152 + 1 1.499 70358.1 1.0 3287 5206 8484 HBL1_DMSO_200M_050219_1,8495 HBL1_DMSO_200M_050219_1,8495,IYQSKVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8496 44.831 800.0 474760.0 25 0 18450.0 -1 DCTANWREK 9 188 590.2660622065343 1178.5175714798686 2 590.2666503787041 MULTI CID FTMS 0 0 0 8484 131716.578125 0.0440096786135789 -3 0.2026939392089843 12 Carbamidomethyl (C) _DC(Carbamidomethyl (C))TANWREK_ ENSG00000135736|ENST00000258214|CCDC102A;ENSG00000150636|ENST00000360242|CCDC102B;ENST00000577772.5_1_18:66504000-66564823:+|nuORF;nc|ENSG00000150636|Q68D86-2|CCDC102B 27.628801355627647 0.1796483985696185 3 QHVDAAEK 8 -1 92.234 0.0 0.0 7.8262 0.0 0.0 282.08317970532784 0.0 282.08317970532784 0.0 60.19782808457642 0.0 0.0 0 3.329689690656103 0.0 0.0 2.036758077242796 QHVDAAEK 7.8262 - 5960 1 1.499 276017.3 0.8199999928474426 3288 5206 8484 HBL1_DMSO_200M_050219_1,8496 HBL1_DMSO_200M_050219_1,8496,DCTANWREK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8497 44.839 370.0 797390.0 25 0 63953.0 + 22062 LPPPPQQKI 9 150 509.30879230611816 1016.6030316790363 2 509.3086120486259 MULTI CID FTMS 0 0 0 8484 114049.9921875 0.0139506802975403 -3 0.2026939392089843 13 Unmodified _LPPPPQQKI_ ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 64.23631603340823 0.0237365939569086 3 {I|L}PPP[QP]QK{I|L} 9 0 + 75.14 0.0 0.0 7.3913 7.3913 91.862 0.0 0.0 0.0 50.80579276576313 12.60386732242263 12.60386732242263 9.208187539523747 0 1.1672951333760406 2.0 0.0 0.714559192431053 + + {I|L}PPP[QP]QK{I|L};{I|L}PPP[QP][AG]K{I|L};{I|L}PP{I|L}[HV][QT]{I|L};{I|L}PP{I|L}[HV]KDV;{I|L}PPP[QP][KA]G{I|L};{I|L}PPP[QP][KA]AV;{I|L}P{I|L}P[HV][QT]{I|L};{I|L}P{I|L}P[HV]KDV;{I|L}PP{I|L}[HV][TA]G{I|L};{I|L}P{I|L}P[HV][TA]G{I|L} 7.3913;6.4855;5.3571;5.3331;5.1696;4.8076;4.7769;4.7529;4.3761;4.08 +;-;-;-;-;-;-;-;-;- + 4132 + 1 1.499 248092.1 1.0 3289 5206 8484 HBL1_DMSO_200M_050219_1,8497 HBL1_DMSO_200M_050219_1,8497,LPPPPQQKI True True LPPPPQQKI 44.838944 509.308612048626 50856796.0 8484.0 nc|ENSG00000101343|Q9BZJ0|CRNKL1;;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;;ENSG00000101343|ENST00000536226|CRNKL1 4.510787645975749 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8498 44.853 800.0 211240.0 25 0 39022.0 -1 0 80 679.1205687195513 0 679.1212036013603 PEAK CID FTMS 0 0 0 8484 104193.4375 0.5565164589042942 -3 0.2026939392089843 14 3 ANQQ 4 -1 9.6412 0.0 0.0 0.71089 0.0 0.0 163.74931452776224 748.2576998346311 912.0070143623934 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ANQQ 0.71089 - 100 + 1 1.499 125664.7 0.7599999904632568 3290 5206 8484 HBL1_DMSO_200M_050219_1,8498 HBL1_DMSO_200M_050219_1,8498, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8499 44.867 800.0 317910.0 25 0 24781.0 28198 PQDTTAAP 8 275 400.6929966651792 0 400.6935302615166 PEAK CID FTMS 0 0 0 8484 99695.4296875 1.0 0 0.0 15 Unmodified _PQDTTAAP_ ENSG00000171195|ENST00000304887|MUC7 8.593279151180031 0.5573742999696857 3 G 1 8 6.9897 0.0 0.0 0.8744 0.0 0.0 517.2358335629772 222.08884607486564 739.3246796378428 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.8744 - 104 + 1 1.499 194018.6 0.6299999952316284 3291 5206 8484 HBL1_DMSO_200M_050219_1,8499 HBL1_DMSO_200M_050219_1,8499,PQDTTAAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8501 44.871 2.5 11832000.0 25 0 1124100.0 -1 VYAFNHCL 8 64 512.2406208061103 1022.4666886790206 2 512.2410766482353 MULTI CID FTMS 0 0 0 8500 8824691.0 0.4888051124213577 2 -0.1754989624023437 1 Carbamidomethyl (C) _VYAFNHC(Carbamidomethyl (C))L_ ENST00000409017.1_1_2:85768989-85769055:+|nuORF 6.354104778181461 0.7857632046190106 3 M{I|L} 2 -1 19.464 0.0 0.0 1.9036 0.0 0.0 760.3350796475737 0.0 760.3350796475737 0.0 2.028937514676482 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L} 1.9036 - 27 + 1 1.494 30564.9 1.0 3292 5207 8500 HBL1_DMSO_200M_050219_1,8501 HBL1_DMSO_200M_050219_1,8501,VYAFNHCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8502 44.872 4.0 8662700.0 25 0 797800.0 + 24953 MPPPPPQGV 9 72 460.2385793050109 918.462605676822 2 460.2390014529228 MULTI CID FTMS 0 0 0 8500 14648013.0 0.48658985720155 -16 1.249309539794922 2 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 34.18733598223924 0.1073653526364521 3 {NN|[MP]|[D{I|L}]|[EV]}PPP 5 4 23.015 0.0 0.0 2.5059 0.0 0.0 0.0 396.1867866382543 396.1867866382543 0.6196092369567197 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}PPP 2.5059 + + 107 1 1.494 35984.9 1.0 3293 5207 8500 HBL1_DMSO_200M_050219_1,8502 HBL1_DMSO_200M_050219_1,8502,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8503 44.873 1.9 12911000.0 25 0 1727000.0 11271 GEVCCWLCI 9 45 513.2169239321389 1024.4192949310775 2 513.2180663943291 MULTI CID FTMS 0 0 0 8500 26153860.0 0.4602506646164983 -2 0.2120857238769531 3 Unmodified _GEVCCWLCI_ ENSG00000164082|ENST00000395052|GRM2;ENST00000296479.9_1_3:51747995-51752125:+|nuORF 12.531546534597751 0.4974689918368763 3 {[DA]|[EG]}V 3 6 29.181 0.0 0.0 2.8486 0.0 0.0 0.0 736.2634471129714 736.2634471129714 5.681277912325342 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}V 2.8486 + + 18 1 1.494 26502.7 1.0 3294 5207 8500 HBL1_DMSO_200M_050219_1,8503 HBL1_DMSO_200M_050219_1,8503,GEVCCWLCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8504 44.874 9.8 2157200.0 25 0 181260.0 + -1 SRPDSILGMQF 11 51 633.8106223050883 1265.6066916769764 2 633.8111450076103 MULTI CID FTMS 0 0 0 8500 5147383.0 1.0 0 0.0 4 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 7.608950283845883 0.8392484121837455 3 QA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 5 -1 30.005 0.0 0.0 2.3708 0.0 0.0 626.3414173810562 0.0 626.3414173810562 0.0 17.53083433768431 0.0 0.0 0 0.5924778212679485 0.0 0.0 0.4247425010840047 QA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 2.3708 - 46 1 1.494 24282.5 1.0 3295 5207 8500 HBL1_DMSO_200M_050219_1,8504 HBL1_DMSO_200M_050219_1,8504,SRPDSILGMQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8505 44.876 19.0 1864300.0 25 0 178340.0 + 1672 ALPDQGIAKA 10 69 492.2800065612653 982.5454601893308 2 492.2809020876884 MULTI CID FTMS 0 0 0 8500 2652489.75 0.1477910570157535 -2 0.2120857238769531 5 Unmodified _ALPDQGIAKA_ ENSG00000089289|ENST00000356413|IGBP1 24.99096001346401 0.4071966087057876 3 [{I|L}A]PD 4 6 37.435 0.0 0.0 3.81 0.0 0.0 0.0 583.3203219049436 583.3203219049436 -1.4659125070036083 0.0 -1.4659125070036083 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}A]PD 3.81 + + 87 + 1 1.494 33847.6 1.0 3296 5207 8500 HBL1_DMSO_200M_050219_1,8505 HBL1_DMSO_200M_050219_1,8505,ALPDQGIAKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8506 44.877 18.0 2053900.0 25 0 208780.0 + 21174 LPCPFPKR 8 50 479.271824048722 956.529095164244 2 479.2718078494072 MULTI CID FTMS 0 0 0 8500 2007651.25 0.7145638405793813 2 -0.1754989624023437 6 Unmodified _LPCPFPKR_ REV__ENSG00000122877|ENST00000242480|EGR2;REV__nc|ENSG00000122877|P11161-2|EGR2 13.50788311687929 0.7113601687236069 3 {I|L}PES 4 -1 45.394 0.0 0.0 4.7457 0.0 0.0 0.0 527.2967012994749 527.2967012994749 34.93623790491817 0.0 0.0 0.0 0 0.2742275032520141 1.2218487496163564 0.0 0.0 {I|L}PES 4.7457 - 35 + 1 1.494 38725.8 1.0 3297 5207 8500 HBL1_DMSO_200M_050219_1,8506 HBL1_DMSO_200M_050219_1,8506,LPCPFPKR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8507 44.879 112.0 369970.0 25 0 22588.0 -1 DPNECLICH 9 77 579.2388905666651 1156.46322820013 2 579.2391235232353 MULTI CID FTMS 0 0 0 8500 887453.9375 1.0 0 0.0 7 2 Carbamidomethyl (C) _DPNEC(Carbamidomethyl (C))LIC(Carbamidomethyl (C))H_ ENSG00000101115|ENST00000217086|SALL4 36.12702656103203 0.0967173616627612 3 DPNST{M(Oxidation (M))|F} 6 -1 72.384 0.0 0.0 6.259 0.0 0.0 0.0 492.17157922916255 492.17157922916255 59.038683048314 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.4247425010840047 DPNST{M(Oxidation (M))|F} 6.259 - 161 + 1 1.494 35292.5 1.0 3298 5207 8500 HBL1_DMSO_200M_050219_1,8507 HBL1_DMSO_200M_050219_1,8507,DPNECLICH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8508 44.881 59.0 687650.0 25 0 138580.0 -1 0 60 366.2021376684201 365.1948612018201 1 366.2019836306572 MULTI CID FTMS 0 0 0 8500 801850.0 0.8721766564259193 -2 0.2120857238769531 8 3 AY{I|L} 3 -1 + 49.654 0.0 0.0 13.596 13.596 96.258 0.0 0.0 0.0 12.206225184280797 9.832881222565248 9.832881222565248 9.90417829939986 0 0.4247425010840047 2.0 0.0 0.0 AY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F} 13.596;10.884;8.6055 -;-;- 13 + 1 1.494 41798.8 1.0 3299 5207 8500 HBL1_DMSO_200M_050219_1,8508 HBL1_DMSO_200M_050219_1,8508, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8509 44.883 116.0 210060.0 25 0 26237.0 28244 PQQTLNLP 8 59 455.7536278381651 909.4927027431302 2 455.7535888552666 MULTI CID FTMS 0 0 0 8500 478892.90625 0.343452283567485 2 -0.1754989624023437 9 Unmodified _PQQTLNLP_ chr4:39605180-39626998|25|12.88|0.11|6.84|-|0|TE_info:MLT1A0,MLT1A0_dup5155,ERVL-MaLR,LTR,donor,-,39626998,39627290|SMIM14,None|5 20.453626601364224 0.6087503291685402 3 [WR]{I|L} 3 7 18.2 0.0 0.0 2.0011 0.0 0.0 0.0 451.1956575983032 451.1956575983032 6.940790073157896 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 [WR]{I|L} 2.0011 - 19 + 1 1.494 26097.7 1.0 3300 5207 8500 HBL1_DMSO_200M_050219_1,8509 HBL1_DMSO_200M_050219_1,8509,PQQTLNLP False False False False TE_chimeric_transcript PXD020620_cell_line HBL1_DMSO_200M_050219_1 8510 44.885 108.0 446960.0 25 0 122840.0 -1 0 62 388.214503111114 387.2072266445141 1 388.2151977419853 MULTI CID FTMS 0 0 0 8500 464074.6875 0.2259180291726907 -9 0.7557373046875 10 3 G 1 -1 2.4743 0.0 0.0 0.639 0.0 0.0 259.11194878982496 68.05138574771718 327.16333453754214 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.639 - 2 + 1 1.494 43481.7 1.0 3301 5207 8500 HBL1_DMSO_200M_050219_1,8510 HBL1_DMSO_200M_050219_1,8510, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8511 44.893 462.0 216570.0 25 0 15882.0 + 7197 EEQLQQIRAE 10 110 622.3170892483903 1242.6196255635805 2 622.3175536990166 MULTI CID FTMS 0 0 0 8500 417867.28125 1.0 0 0.0 11 Unmodified _EEQLQQIRAE_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 104.48436234954404 0.0061796757808163 3 EEQ{I|L}QQ{I|L}RAE 10 0 + 97.121 0.0 0.0 7.8158 7.8158 92.324 0.0 0.0 0.0 24.25968732272281 13.553663219118915 13.553663219118915 9.164539485499262 0 1.3851518780601924 1.6989700043360187 1.3539171939081172 1.4049471895720984 + + EEQ{I|L}QQ{I|L}RAE;EEQ{I|L}Q[AG]{I|L}RAE;EE[AG]{I|L}QQ{I|L}RAE;EEQ{I|L}[AG]Q{I|L}RAE;EEQ{I|L}QQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};EE[AG]{I|L}Q[AG]{I|L}RAE;EE[AG]{I|L}[AG]Q{I|L}RAE;EEQ{I|L}[AG][AG]{I|L}RAE;EEQ{I|L}QQ{I|L}[KP]M;EE[AG]{I|L}QQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 7.8158;7.0783;7.0783;7.0783;6.7251;6.3437;6.3437;6.3437;6.0379;5.9876 +;-;-;-;-;-;-;-;-;- + 1145 + 1 1.494 79176.6 1.0 3302 5207 8500 HBL1_DMSO_200M_050219_1,8511 HBL1_DMSO_200M_050219_1,8511,EEQLQQIRAE True True EEQLQQIRAE 44.893416 622.317553699017 1928482.125 8500.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 6.0264302889506025 2.0 True 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8512 44.897 193.0 447280.0 25 0 30281.0 -1 ADINCKEV 8 99 474.7261702176341 947.4377875020682 2 475.2281066775322 MULTI CID FTMS 0 0 0 8500 398584.5 0.1125781056867358 -3 0.22882080078125 12 Carbamidomethyl (C) _ADINC(Carbamidomethyl (C))KEV_ ENST00000582618.1_1_18:21948255-21957497:-|nuORF 14.581692164780916 0.6954967302934248 3 VKV 3 -1 14.191 0.0 0.0 1.4978 0.0 0.0 603.1942094764808 0.0 603.1942094764808 0.0 4.498147274412187 0.0 0.0 0 0.0 0.0 0.0 0.0 VKV 1.4978 - 151 + 1 1.494 71558.4 1.0 3303 5207 8500 HBL1_DMSO_200M_050219_1,8512 HBL1_DMSO_200M_050219_1,8512,ADINCKEV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8513 44.899 72.0 272790.0 25 0 17934.0 + 43048 VYGGRHWR 8 53 515.7692635039208 1029.5239740746415 2 515.7695190310478 MULTI CID FTMS 0 0 0 8500 419387.4375 0.2794171057327111 2 -0.1754989624023437 13 Unmodified _VYGGRHWR_ REV__nc|ENSG00000078795|Q9NZM6-4|PKD2L2 10.183394434864962 0.7604730176254005 3 [YV]N 3 -1 32.447 0.0 0.0 3.1517 0.0 0.0 0.0 650.3252490592696 650.3252490592696 23.86378109248469 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [YV]N 3.1517 - 35 1 1.494 22741.3 1.0 3304 5207 8500 HBL1_DMSO_200M_050219_1,8513 HBL1_DMSO_200M_050219_1,8513,VYGGRHWR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8514 44.908 507.0 372250.0 25 0 44745.0 + 31866 RTLAEIAKA 9 176 486.7952259729697 971.5758990127396 2 486.7950927615166 MULTI CID FTMS 0 0 0 8500 369654.4375 1.0 0 0.0 14 Unmodified _RTLAEIAKA_ ENSG00000121390|ENST00000338910|PSPC1;nc|ENSG00000121390|Q8WXF1-2|PSPC1 36.506200033944 0.094635877243972 3 {[TV]|[{I|L}S]}A[W{I|L}]{I|L}AAK 9 6 {[TV]|[{I|L}S]}A[W{I|L}]{I|L} + + 30.446 11.501 1.6829 3.1337 3.1337 50.447 0.0 0.0 0.0 0.0 17.27256898857895 0.0 0.0 0 1.0 0.0 0.0 0.680083263987886 {[TV]|[{I|L}S]}A[W{I|L}]{I|L}AAK 3.1337 - 755 + 1 1.494 146513.9 1.0 3305 5207 8500 HBL1_DMSO_200M_050219_1,8514 HBL1_DMSO_200M_050219_1,8514,RTLAEIAKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8515 44.909 52.0 633250.0 25 0 39644.0 25007 MPPRGPASE 9 62 471.2302739017799 940.4459948703598 2 471.2301818728447 MULTI CID FTMS 0 0 0 8500 362563.28125 0.3076065294104297 -8 0.65576171875 15 Unmodified _MPPRGPASE_ ENSG00000262484|ENST00000571838|CCER2 9.38312468134398 0.5871240394367778 3 MPP 3 6 46.242 0.0 0.0 4.9171 0.0 0.0 0.0 612.2760714166624 612.2760714166624 30.757659435244733 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 + MPP 4.9171 + + 32 + 1 1.494 33205.3 1.0 3306 5207 8500 HBL1_DMSO_200M_050219_1,8515 HBL1_DMSO_200M_050219_1,8515,MPPRGPASE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8516 44.913 228.0 275050.0 25 0 13994.0 + 27611 PLEPTQSV 8 116 435.73190224853386 869.4492515638677 2 435.7318908572197 MULTI CID FTMS 0 0 0 8500 290271.3125 0.5528290293444481 -17 1.295917510986328 16 Unmodified _PLEPTQSV_ REV__ENST00000446108.5_1_10:6131477-6131663:+|nuORF 10.183394434864962 0.7604730176254005 3 V 1 -1 13.979 0.0 0.0 1.6078 0.0 0.0 752.3697665558584 0.0 752.3697665558584 0.0 3.7679152944645367 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.6078 + + 26 + 1 1.494 55269.4 1.0 3307 5207 8500 HBL1_DMSO_200M_050219_1,8516 HBL1_DMSO_200M_050219_1,8516,PLEPTQSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8517 44.925 682.0 1669700.0 25 0 637250.0 6695 ECKECRKCFYQ 11 112 775.8295044207589 1549.6444559083177 2 775.8282348513603 MULTI CID FTMS 0 0 0 8500 238180.734375 0.8269801866324437 -1 0.1085128784179687 17 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 41.95555342248728 0.1822715950200113 3 [R{M(Oxidation (M))|F}]QSSACQDA{M(Oxidation (M))|F}YQ 13 9 + 100.46 0.0 0.0 6.4829 6.4829 81.736 0.0 0.0 0.0 4.247004307505534 0.0 0.0 2.874571884747084 0 1.424742501084005 0.0 1.4489700043360187 2.0783409326844264 [R{M(Oxidation (M))|F}]QSSACQDA{M(Oxidation (M))|F}YQ;[R{M(Oxidation (M))|F}]QSSACDAGA{M(Oxidation (M))|F}YK;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}YQ;[R{M(Oxidation (M))|F}]QSSACDQA{M(Oxidation (M))|F}YQ;[R{M(Oxidation (M))|F}]QSSACWGA{M(Oxidation (M))|F}YK;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}YK;{[DA]|[EG]}GAHEAQDAGA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}QHEAQDAGA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}{M(Oxidation (M))|F}[KG]SACQDA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}GAH[KP]CQDA{M(Oxidation (M))|F}YK 6.4829;6.2974;6.2088;6.175;6.175;6.1671;6.0248;5.9816;5.9316;5.9159 -;-;-;-;-;-;-;-;-;- 16412 1 1.494 785674.6 1.0 3308 5207 8500 HBL1_DMSO_200M_050219_1,8517 HBL1_DMSO_200M_050219_1,8517,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8518 44.931 214.0 217700.0 25 0 22191.0 + 8938 FAMNDESVFY 10 75 611.7600852125522 1221.5056174919043 2 611.7606689333916 MULTI CID FTMS 0 0 0 8500 219320.65625 0.9379516221796594 -1 0.1085128784179687 18 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 25.399314129420983 0.3980215340001851 3 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 77.785 0.0 0.0 6.3679 6.3679 88.466 0.0 0.0 0.0 5.764837301042718 62.29995346516773 5.764837301042718 9.164539485499262 0 0.8494850021680094 0.0 0.9916440611282626 0.4247425010840047 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;{[DA]|[EG]}AA[HD]QNA{M(Oxidation (M))|F}Y;[HD][TA]{[{M(Oxidation (M))|F}H]|[RQ]}NA{M(Oxidation (M))|F}Y;{[DA]|[EG]}[HT]{[{M(Oxidation (M))|F}H]|[RQ]}NA{M(Oxidation (M))|F}Y 6.3679;5.6177;5.6177;5.6177;4.8703;4.8703;4.8703;3.8368;2.7162;2.3904 -;-;-;-;-;-;-;-;-;- 217 1 1.494 39908.1 1.0 3309 5207 8500 HBL1_DMSO_200M_050219_1,8518 HBL1_DMSO_200M_050219_1,8518,FAMNDESVFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8520 44.935 2.6 11724000.0 25 0 1781600.0 6700 ECLFLAVM 8 50 463.2311693116779 924.4477856901558 2 463.2316772341728 MULTI CID FTMS 0 0 0 8519 20498126.0 0.8022828403409036 1 -0.1115531921386718 1 Unmodified _ECLFLAVM_ ENSG00000176198|ENST00000641082|OR11H4;nc|ENSG00000176198|Q8NGC9|OR11H4 19.438996006549623 0.6237395211498085 3 VM 2 6 30.217 0.0 0.0 3.2686 0.0 0.0 676.3278343735527 0.0 676.3278343735527 0.0 22.76925019195368 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + VM 3.2686 + + 8 + 1 1.494 34329.7 1.0 3310 5208 8519 HBL1_DMSO_200M_050219_1,8520 HBL1_DMSO_200M_050219_1,8520,ECLFLAVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8521 44.936 8.4 5183600.0 25 0 494260.0 + 44774 YPLSKAQTV 9 80 503.78250582572656 1005.5504587182533 2 503.7821533083916 MULTI CID FTMS 0 0 0 8519 5904370.0 0.5913991472726979 1 -0.1115531921386718 2 Unmodified _YPLSKAQTV_ ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3 41.8396318013385 0.0653578398400075 3 YP{I|L}S 4 5 59.412 0.0 0.0 5.9085 0.0 0.0 0.0 542.2915133111936 542.2915133111936 37.501225267834 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.7742275032520141 0.0 + YP{I|L}S 5.9085 + + 187 + 1 1.494 38935.9 1.0 3311 5208 8519 HBL1_DMSO_200M_050219_1,8521 HBL1_DMSO_200M_050219_1,8521,YPLSKAQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8522 44.937 18.0 3046300.0 25 0 485500.0 + 38834 TVIAKVNNV 9 75 479.2899642516416 956.5653755700832 2 479.2901794314384 MULTI CID FTMS 0 0 0 8519 1822144.875 0.3523218231030685 -1 0.0639457702636718 3 Unmodified _TVIAKVNNV_ ENSG00000113407|ENST00000265112|TARS1;nc|ENSG00000113407|P26639-2|TARS1 20.453626601364224 0.2830276176381075 3 {[TV]|[{I|L}S]}{I|L}[MT]V{I|L}N 8 4 36.661 0.0 0.0 3.8325 0.0 0.0 0.0 82.06698785953358 82.06698785953358 25.401487069606468 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3807196863200844 {[TV]|[{I|L}S]}{I|L}[MT]V{I|L}N 3.8325 - 126 + 1 1.494 48814.4 1.0 3312 5208 8519 HBL1_DMSO_200M_050219_1,8522 HBL1_DMSO_200M_050219_1,8522,TVIAKVNNV False True TVIAKVNNV 44.937101 479.290179431438 24851724.0 8519.0 ENSG00000113407|ENST00000265112|TARS1;;nc|ENSG00000113407|P26639-2|TARS1 4.628602584203084 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8523 44.944 384.0 1111100.0 25 0 87938.0 -1 DLSCFCCCL 9 165 532.1903638051083 1062.3661746770165 2 532.1907226443291 MULTI CID FTMS 0 0 0 8519 599991.8125 1.0 0 0.0 4 Carbamidomethyl (C) _DLSC(Carbamidomethyl (C))FCCCL_ ENST00000292377.3_1_7:99774686-99774926:-|nuORF 20.453626601364224 0.2830276176381075 3 {I|L}DT{I|L} 4 -1 37.057 0.0 0.0 3.4882 0.0 0.0 0.0 617.1059054010374 617.1059054010374 3.370331500528856 0.0 0.0 0.0 0 0.1989700043360188 0.6777807052660807 0.3252574989159953 0.0 {I|L}DT{I|L} 3.4882 - 1061 + 1 1.494 321425.6 1.0 3313 5208 8519 HBL1_DMSO_200M_050219_1,8523 HBL1_DMSO_200M_050219_1,8523,DLSCFCCCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8524 44.948 181.0 232730.0 25 0 24504.0 + -1 GESCSCEYSG 10 96 539.6744870641165 0 539.6742431521416 PEAK CID FTMS 0 0 0 8519 571966.625 1.0 0 0.0 5 Carbamidomethyl (C) _GESC(Carbamidomethyl (C))SCEYSG_ REV__ENSG00000138829|ENST00000262464|FBN2;REV__nc|ENSG00000138829|P35556-2|FBN2 3.5964929083625545 0.3961065659209837 3 V 1 -1 6.9897 0.0 0.0 0.6488 0.0 0.0 792.202293364758 183.0417879693969 975.2440813341548 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.6488 - 7 + 1 1.494 41743.4 1.0 3314 5208 8519 HBL1_DMSO_200M_050219_1,8524 HBL1_DMSO_200M_050219_1,8524,GESCSCEYSG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8525 44.949 85.0 657840.0 25 0 63412.0 + -1 KYISGPHEL 9 92 522.2790550695399 521.2717786029399 1 522.2793456912041 MULTI CID FTMS 0 0 0 8519 456524.25 0.1852775484760158 -1 0.0639457702636718 6 ENSG00000117724|ENST00000366955|CENPF 3 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 2.5888 0.0 0.0 356.1923698888758 0.0 356.1923698888758 0.0 2.657394585211277 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.5888 - 41 + 1 1.494 50289.1 1.0 3315 5208 8519 HBL1_DMSO_200M_050219_1,8525 HBL1_DMSO_200M_050219_1,8525, False False KYISGPHEL 44.949416 522.279345691204 18373112.5 8519.0 ENSG00000117724|ENST00000366955|CENPF 6.5439988772074384 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8526 44.953 188.0 415850.0 25 0 38254.0 + 3928 DALKKDLI 8 107 305.8555967850025 914.5449609552074 3 305.8549682497978 MULTI CID FTMS 0 0 0 8519 415567.5 1.0 0 0.0 7 Unmodified _DALKKDLI_ ENSG00000136099|ENST00000377942|PCDH8;nc|ENSG00000136099|O95206-2|PCDH8 14.838274106304384 0.6917062315640577 3 {[DA]|[EG]}{I|L}K 4 4 36.075 0.0 0.0 3.9446 0.0 0.0 0.0 484.2788179986938 484.2788179986938 22.97589873476652 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}{I|L}K 3.9446 + + 83 + 1 1.494 69075.8 1.0 3316 5208 8519 HBL1_DMSO_200M_050219_1,8526 HBL1_DMSO_200M_050219_1,8526,DALKKDLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8527 44.962 486.0 273750.0 25 0 21117.0 1161 AHCHCGDHV 9 155 489.6877862060765 977.361019478953 2 489.6875793337822 MULTI CID FTMS 0 0 0 8519 404990.21875 1.0 0 0.0 8 Unmodified _AHCHCGDHV_ ENSG00000198718|ENST00000361462|TOGARAM1;ENST00000555607.1_1_14:45431624-45475488:+|nuORF;ENST00000555945.1_1_14:45431624-45465140:+|nuORF;nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1;nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1;nc|ENSG00000198718|Q9Y4F4|TOGARAM1 5.230669730166228 0.7320841359114558 3 Q 1 9 13.288 0.0 0.0 1.3596 0.0 0.0 831.291605271725 0.0 831.291605271725 0.0 1.694092782766905 0.0 0.0 0 0.0 0.0 0.0 0.1505149978319906 Q 1.3596 - 495 + 1 1.494 103426.8 1.0 3317 5208 8519 HBL1_DMSO_200M_050219_1,8527 HBL1_DMSO_200M_050219_1,8527,AHCHCGDHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8528 44.975 800.0 448970.0 25 0 32677.0 + 32478 SAIRRLKEL 9 254 362.5645293822787 1084.6717587470362 3 362.5644409060478 MULTI CID FTMS 0 0 0 8519 195698.75 0.3178418933558114 -1 0.0639457702636718 9 Unmodified _SAIRRLKEL_ ENSG00000197756|ENST00000491306|RPL37A;ENST00000420712.1_1_2:217364102-217366124:+|nuORF;ENST00000494116.1_1_11:111759925-111760129:-|nuORF;nc|ENSG00000176343|A6NKH3|RPL37AP8 45.739877483867886 0.0497104363764649 3 {I|L}{M(Oxidation (M))|F}K 3 7 29.169 0.0 0.0 2.6892 0.0 0.0 0.0 693.4138277643186 693.4138277643186 10.797145103202812 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6861818737241735 {I|L}{M(Oxidation (M))|F}K 2.6892 - 190 + 1 1.494 283547.2 0.959999978542328 3318 5208 8519 HBL1_DMSO_200M_050219_1,8528 HBL1_DMSO_200M_050219_1,8528,SAIRRLKEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8529 44.988 702.0 311710.0 25 0 28342.0 + 16361 IYPGYHQSSY 10 140 607.7773015210219 1213.5400501088436 2 607.7773315310478 MULTI CID FTMS 0 0 0 8519 172589.703125 0.3213253004197283 -1 0.0639457702636718 10 Unmodified _IYPGYHQSSY_ ENSG00000176986|ENST00000345254|SEC24C 59.36838082759317 0.0382430275470746 3 {I|L}YPGNWQSSY 10 2 + 93.202 0.0 0.0 7.6802 7.6802 84.777 0.0 0.0 0.0 70.01455284574901 3.846682531158919 3.846682531158919 2.6411647866134587 0 0.4247425010840047 2.0 1.2803695511246984 0.4247425010840047 {I|L}YPGNWQSSY;{I|L}YPGNS[WQ]SY;{I|L}Y[HM]SQVSSY;{I|L}YPGNSQH[NG]Q;{I|L}YPGGGWQSSY;{I|L}YPGNW[AG]SSY;{I|L}Y[HM]SVQSSY;{I|L}YPGYHQSSY;{I|L}YPGNSQC(Carbamidomethyl (C))Y{I|L};{I|L}YPGGGS[WQ]SY 7.6802;7.4625;7.0541;6.9475;6.925;6.925;6.8764;6.801;6.7853;6.7074 -;-;-;-;-;-;-;+;-;- + 2763 + 1 1.494 161192.9 1.0 3319 5208 8519 HBL1_DMSO_200M_050219_1,8529 HBL1_DMSO_200M_050219_1,8529,IYPGYHQSSY True True IYPGYHQSSY 44.987643 607.777331531048 4069152.0 8519.0 ENSG00000176986|ENST00000345254|SEC24C 8.436134815216064 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8530 45.001 800.0 409030.0 25 0 20119.0 + 32519 SALPHVHTV 9 243 320.8467534214767 959.51843086463 3 320.8463928103447 MULTI CID FTMS 0 0 0 8519 153881.453125 0.4631983899733606 -2 0.1724586486816406 11 Unmodified _SALPHVHTV_ ENSG00000166340|ENST00000299427|TPP1;nc|ENSG00000166340|O14773-2|TPP1 48.345845343767074 0.0439967357579942 3 PHVHS{I|L} 6 5 26.264 0.0 0.0 2.7372 0.0 0.0 271.1527505861432 0.0 271.1527505861432 0.0 6.656855415698548 0.0 0.0 0 0.0 0.0 1.6298545532927078 0.0 PHVHS{I|L} 2.7372 - 508 + 1 1.494 260025.9 0.7799999713897705 3320 5208 8519 HBL1_DMSO_200M_050219_1,8530 HBL1_DMSO_200M_050219_1,8530,SALPHVHTV True True SALPHVHTV 45.001457 320.846392810345 4450523.5 8519.0 ENSG00000166340|ENST00000299427|TPP1;;nc|ENSG00000166340|O14773-2|TPP1 7.667532444000244 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8531 45.014 729.0 215200.0 25 0 13746.0 + 18478 KYLDAEQSY 9 183 558.7635252599559 1115.5124975867118 2 558.7632324099541 MULTI CID FTMS 0 0 0 8519 149950.296875 0.8623540363908226 -1 0.0639457702636718 12 Unmodified _KYLDAEQSY_ ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF 66.45667989310934 0.0225072657982126 3 {[QS]|[NT]}Y[{I|L}V]EQSY 9 4 + 61.895 0.0 0.0 5.5485 5.5485 74.352 0.0 0.0 0.0 0.0876226661899153 16.478174818886373 0.0876226661899153 0.0876226661899153 0 0.5 0.0 1.6889307197995391 1.3684151806525389 {[QS]|[NT]}Y[{I|L}V]EQSY;[AG]SY[{I|L}V]EQSY;[YK]{I|L}DAEQSY;{[{M(Oxidation (M))|F}C]|[YS]}Q[{I|L}V]EQSY;[YK]{I|L}WEQSY;{NN|[MP]|[D{I|L}]|[EV]}YKAEQSY;{[DA]|[EG]}{I|L}KYEQSY;{NN|[MP]|[D{I|L}]|[EV]}AKYEQSY;[AG]S[{I|L}V]YEQSY;{[HG]|PP}P{I|L}DAEQSY 5.5485;5.5407;5.5063;5.2643;5.2412;5.2388;5.1496;4.9279;4.8376;4.8056 -;-;+;-;-;-;-;-;-;- + 2310 1 1.494 118563.9 1.0 3321 5208 8519 HBL1_DMSO_200M_050219_1,8531 HBL1_DMSO_200M_050219_1,8531,KYLDAEQSY True True KYLDAEQSY 45.014109 558.763232409954 1402280.75 8519.0 ENSG00000141452|ENST00000269221|RMC1;;ENST00000589215.5_1_18:21087981-21111645:+|nuORF 6.371563911437988 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8532 45.029 774.0 290730.0 25 0 13516.0 + 26214 NQIESKAAYV 10 235 561.7939922073369 1121.5734314814738 2 561.7930175662041 MULTI CID FTMS 0 0 0 8519 124853.09375 0.8327312029168213 -1 0.0639457702636718 13 Unmodified _NQIESKAAYV_ ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11 53.40400417844725 0.0601721406801337 3 {[QN]|[E{I|L}]|[KN]}{I|L} 3 7 33.684 0.0 0.0 3.0033 0.0 0.0 0.0 763.3639642786019 763.3639642786019 4.928739758868005 0.0 0.0 0.0 0 1.0 0.4814860601221125 0.1421590589602531 0.6989700043360187 + {[QN]|[E{I|L}]|[KN]}{I|L} 3.0033 + + 2021 1 1.494 171225.5 1.0 3322 5208 8519 HBL1_DMSO_200M_050219_1,8532 HBL1_DMSO_200M_050219_1,8532,NQIESKAAYV True True NQIESKAAYV 45.028978 561.793017566204 2366312.75 8519.0 nc|ENSG00000102226|P51784|USP11;;ENSG00000102226|ENST00000377107|USP11 6.24218225479126 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8533 45.042 760.0 190470.0 25 0 48310.0 + 32107 RVLSEDAIRTA 11 127 615.8453603676454 1229.6761678020907 2 615.8454467654228 MULTI CID FTMS 0 0 0 8519 124953.0390625 0.740933358015687 -1 0.0639457702636718 14 Unmodified _RVLSEDAIRTA_ ENSG00000168393|ENST00000305784|DTYMK;nc|ENSG00000168393|P23919-2|DTYMK 24.95707706330732 0.5062028554934599 3 MR{I|L}AE 5 9 32.237 0.0 0.0 2.6216 0.0 0.0 59.04538274525323 567.2904146783811 626.3357974236344 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.3807196863200844 MR{I|L}AE 2.6216 - 275 + 1 1.494 108361.6 1.0 3323 5208 8519 HBL1_DMSO_200M_050219_1,8533 HBL1_DMSO_200M_050219_1,8533,RVLSEDAIRTA False True RVLSEDAIRTA 45.042144 615.845446765423 797766.8125 8519.0 ENSG00000168393|ENST00000305784|DTYMK;;nc|ENSG00000168393|P23919-2|DTYMK 3.942924022674561 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8535 45.046 15.0 2877800.0 25 0 233690.0 + 5748 DPNKQVIRV 9 74 534.8118114801339 0 534.8116943240166 PEAK CID FTMS 0 0 0 8534 3179066.75 0.389929452339086 2 -0.2089767456054687 1 Unmodified _DPNKQVIRV_ ENSG00000100353|ENST00000216190|EIF3D;ENST00000462641.1_1_22:36907036-36908721:-|nuORF;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 36.12702656103203 0.0807574182900477 3 PNKQV{I|L} 6 3 39.073 0.0 0.0 3.6599 0.0 0.0 115.02533974221474 270.1576326959594 385.18297243817415 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.3807196863200844 + PNKQV{I|L} 3.6599 + + 111 + 1 1.488 38142.8 1.0 3324 5209 8534 HBL1_DMSO_200M_050219_1,8535 HBL1_DMSO_200M_050219_1,8535,DPNKQVIRV True True DPNKQVIRV 45.046299 534.811694324017 92908824.0 8534.0 nc|ENSG00000100353|O15371-2|EIF3D;;ENSG00000100353|ENST00000216190|EIF3D;;nc|ENSG00000100353|O15371-3|EIF3D;;ENST00000462641.1_1_22:36907036-36908721:-|nuORF 6.153074741363525 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8536 45.048 69.0 1020100.0 25 0 135420.0 + 41742 VPTDPPRTI 9 99 498.2796454378588 994.5447379425176 2 498.2797424197197 MULTI CID FTMS 0 0 0 8534 670696.75 0.0574621623492585 7 -0.5861320495605469 2 Unmodified _VPTDPPRTI_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 24.99096001346401 0.2132109383330889 3 VPTDP 5 4 60.217 0.0 0.0 6.0547 0.0 0.0 0.0 482.2730806940063 482.2730806940063 39.98310553789601 0.0 0.0 0.0 0 0.8494850021680094 1.3010299956639813 0.4247425010840047 0.0 + VPTDP 6.0547 + + 109 + 1 1.488 58106.3 1.0 3325 5209 8534 HBL1_DMSO_200M_050219_1,8536 HBL1_DMSO_200M_050219_1,8536,VPTDPPRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8537 45.049 23.0 2241500.0 25 0 297660.0 + 2991 AVIHEAPAV 9 68 453.7558642068626 905.4971754805252 2 453.7558776736259 MULTI CID FTMS 0 0 0 8534 2386332.25 0.3809781777473945 -1 0.1115531921386718 3 Unmodified _AVIHEAPAV_ ENSG00000146232|ENST00000619360|NFKBIE;nc|ENSG00000146232|O00221|NFKBIE 44.40701690623563 0.0526327925666318 3 {[YC]|[HE]}A{I|L}VAPAV 9 5 + 60.143 0.0 0.0 6.642 6.642 87.93 0.0 0.0 0.0 7.686143099099851 16.478174818886373 7.686143099099851 7.686143099099851 0 0.805462187404089 0.0 0.3494850021680094 0.0 {[YC]|[HE]}A{I|L}VAPAV;{[VA]|[{I|L}G]}[H{I|L}]EAPAV;{[YC]|[HE]}A{I|L}VPAAV;{[YC]|[HE]}{I|L}AVAPAV;[PA][NP]AVAPAV;[H{I|L}]EAVAPAV;{[VA]|[{I|L}G]}[H{I|L}]EPAAV;{[YC]|[HE]}{I|L}AVPAAV;[PA][NP]AVPAAV;[H{I|L}]{[VA]|[{I|L}G]}EAPAV 6.642;5.7932;5.7574;5.7291;5.5482;5.2897;4.9085;4.8445;4.6635;4.4107 -;+;-;-;-;-;-;-;-;- + 224 1 1.488 47036.5 1.0 3326 5209 8534 HBL1_DMSO_200M_050219_1,8537 HBL1_DMSO_200M_050219_1,8537,AVIHEAPAV True True AVIHEAPAV 45.0491 453.755877673626 26281840.0 8534.0 nc|ENSG00000146232|O00221|NFKBIE;;ENSG00000146232|ENST00000619360|NFKBIE 6.703401883443196 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8538 45.05 37.0 1344400.0 25 0 100700.0 + 7921 ELQQKAEF 8 91 496.755567781074 991.496582628948 2 496.7559997439384 MULTI CID FTMS 0 0 0 8534 1696787.125 1.0 0 0.0 4 Unmodified _ELQQKAEF_ ENSG00000117724|ENST00000366955|CENPF 44.40701690623563 0.1655546087385432 3 [AG]Q{I|L}S{M(Oxidation (M))|F}Q{[QN]|[E{I|L}]|[KN]} 9 7 + 32.524 0.0 0.0 3.2803 3.2803 68.022 0.0 0.0 0.0 0.4185856309322417 3.0102999566398125 0.4185856309322417 0.4185856309322417 0 0.0 1.3979400086720375 0.5 1.1237125054200234 [AG]Q{I|L}S{M(Oxidation (M))|F}Q{[QN]|[E{I|L}]|[KN]};[{I|L}T]NQ{M(Oxidation (M))|F}Q{[QN]|[E{I|L}]|[KN]};[AG]{I|L}QS{M(Oxidation (M))|F}Q{[QN]|[E{I|L}]|[KN]};[{I|L}T]NAG{M(Oxidation (M))|F}Q{[QN]|[E{I|L}]|[KN]};[AG]{I|L}SQ{M(Oxidation (M))|F}Q{[QN]|[E{I|L}]|[KN]};[AG]Q{I|L}S{M(Oxidation (M))|F}E[Q{I|L}];[{I|L}T]NQ{M(Oxidation (M))|F}E[Q{I|L}];{[QN]|[E{I|L}]|[KN]}[DV]{M(Oxidation (M))|F}Q{[QN]|[E{I|L}]|[KN]};[AG]{I|L}QS{M(Oxidation (M))|F}E[Q{I|L}];[{I|L}T]NAG{M(Oxidation (M))|F}E[Q{I|L}] 3.2803;3.2381;3.1312;3.1066;3.0957;2.9767;2.9344;2.8277;2.8276;2.803 -;-;-;-;-;-;-;-;-;- 613 1 1.488 43314.9 1.0 3327 5209 8534 HBL1_DMSO_200M_050219_1,8538 HBL1_DMSO_200M_050219_1,8538,ELQQKAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8539 45.051 30.0 1858400.0 25 0 152140.0 + 32603 SAVTSVAKV 9 83 431.2554669985414 860.4963810638828 2 431.2554809451103 MULTI CID FTMS 0 0 0 8534 1356803.5 0.8596244443033 -1 0.1115531921386718 5 Unmodified _SAVTSVAKV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 29.84058131909904 0.1515068451768857 3 {[SA]|[TG]}VTSVAKV 9 0 + 59.574 0.0 0.0 6.9232 6.9232 91.785 0.0 0.0 0.0 44.50336975930973 5.584969447981685 5.584969447981685 10.70107520596089 0 1.1549471895720984 1.6989700043360187 0.0 0.0 + + {[SA]|[TG]}VTSVAKV;{[SA]|[TG]}VTA[VS]KV;{[SA]|[TG]}{[WT]|[RM]}VAKV 6.9232;5.6796;3.4926 +;-;- + 96 + 1 1.488 47130.1 1.0 3328 5209 8534 HBL1_DMSO_200M_050219_1,8539 HBL1_DMSO_200M_050219_1,8539,SAVTSVAKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8540 45.053 70.0 981310.0 25 0 103040.0 + 18471 KYISGPHEL 9 114 348.52197435916355 1042.5440936776906 3 348.5219299197197 MULTI CID FTMS 0 0 0 8534 860170.4375 1.0 0 0.0 6 Unmodified _KYISGPHEL_ ENSG00000117724|ENST00000366955|CENPF 32.30548876998284 0.1201446275138228 3 [YK]{I|L}{M(Oxidation (M))|F}S 5 6 25.317 0.0 0.0 2.4284 0.0 0.0 0.0 401.21875123067815 401.21875123067815 12.783773276981318 0.0 0.0 0.0 0 0.0 0.0 0.5 0.2614393726401688 [YK]{I|L}{M(Oxidation (M))|F}S 2.4284 - 128 1 1.488 59421.6 1.0 3329 5209 8534 HBL1_DMSO_200M_050219_1,8540 HBL1_DMSO_200M_050219_1,8540,KYISGPHEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8541 45.056 132.0 645920.0 25 0 44721.0 + 22297 LPSASTSKATI 11 136 538.303597263653 1074.592641594106 2 538.3030883669853 MULTI CID FTMS 0 0 0 8534 739991.8125 1.0 0 0.0 7 Unmodified _LPSASTSKATI_ ENSG00000083937|ENST00000263780|CHMP2B;ENST00000466696.1_1_3:87302513-87302969:+|nuORF;nc|ENSG00000083937|Q9UQN3-2|CHMP2B 66.68293810318366 0.0420228588792048 3 {I|L}PSASTS[KA]T{I|L} 11 0 + 95.27 0.0 0.0 8.8657 8.8657 96.187 0.0 0.0 0.0 58.17066724219135 13.565473235138128 13.565473235138128 13.285185999135692 0 1.5994850021680094 2.0 1.4386218330464624 0.0 + + {I|L}PSASTS[KA]T{I|L};{I|L}PSA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KA]T{I|L};{I|L}PS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S[KA]T{I|L};[{I|L}P]S[{M(Oxidation (M))|F}T]ST{I|L}P{I|L};[{I|L}P]S[{M(Oxidation (M))|F}T]SP{I|L}T{I|L};{I|L}P{I|L}H[HA]{[CA]|SS}T{I|L};[{I|L}P]S[YT]AT{I|L}P{I|L};{I|L}P[MN]TS[KA]T{I|L};[{I|L}P]S[YT]AP{I|L}T{I|L};[{I|L}P]S[{M(Oxidation (M))|F}T]STP{I|L}{I|L} 8.8657;7.6294;6.7439;6.3267;6.2538;6.2113;6.1203;6.0685;6.0474;6.0466 +;-;-;-;-;-;-;-;-;- + 2761 + 1 1.488 75252.6 1.0 3330 5209 8534 HBL1_DMSO_200M_050219_1,8541 HBL1_DMSO_200M_050219_1,8541,LPSASTSKATI True True LPSASTSKATI 45.055801 538.303088366985 4505652.0 8534.0 ENST00000466696.1_1_3:87302513-87302969:+|nuORF;;nc|ENSG00000083937|Q9UQN3-2|CHMP2B;;ENSG00000083937|ENST00000263780|CHMP2B 5.747262636820476 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8542 45.057 65.0 638680.0 25 0 76976.0 + 36335 SYNPAENAV 9 71 482.722692080342 963.430831227484 2 482.7226745486259 MULTI CID FTMS 0 0 0 8534 688703.5625 0.8615627801049708 -1 0.1115531921386718 8 Unmodified _SYNPAENAV_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 11.640296217721598 0.521594087909532 3 V 1 8 15.485 0.0 0.0 1.6072 0.0 0.0 846.3513385900802 0.0 846.3513385900802 0.0 2.631199993665657 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.6072 + + 87 + 1 1.488 37491.8 1.0 3331 5209 8534 HBL1_DMSO_200M_050219_1,8542 HBL1_DMSO_200M_050219_1,8542,SYNPAENAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8543 45.061 161.0 543470.0 25 0 33164.0 + 41545 VPPAPTATV 9 125 426.7446743488649 851.4747957645299 2 426.7449218630791 MULTI CID FTMS 0 0 0 8534 593070.375 1.0 0 0.0 9 Unmodified _VPPAPTATV_ ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4 44.40701690623563 0.0526327925666318 3 [VP][PA]Q{I|L}EV 8 4 + 41.322 0.0 0.0 4.853 4.853 71.961 0.0 0.0 0.0 7.218609955082719 12.734120095529937 7.218609955082719 0.1291065739524555 0 0.75 2.0 0.0 0.0 [VP][PA]Q{I|L}EV;[VP]{[CA]|SS}V[PA]PV;[VP]{[CA]|SS}V[HK]V;[VP][PA]S[VS]PV;[TP]APPAVTV;[TP]ATV[PA]PV;[TA]PPPAVTV;[TA]PTV[PA]PV;[VP][PA][AG]{I|L}EV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[Y{I|L}]{I|L}TV 4.853;4.8379;4.6374;4.1188;4.0053;3.9871;3.8734;3.8552;3.7653;3.6382 -;-;-;-;-;-;-;-;-;- 593 1 1.488 78490.6 1.0 3332 5209 8534 HBL1_DMSO_200M_050219_1,8543 HBL1_DMSO_200M_050219_1,8543,VPPAPTATV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8544 45.064 158.0 465900.0 25 0 39863.0 -1 GEVNCPDGSD 10 112 525.1958570641044 1048.3771611950087 2 525.1959106326103 MULTI CID FTMS 0 0 0 8534 521525.21875 0.7060097613144143 1 -0.0952491760253906 10 Carbamidomethyl (C) _GEVNC(Carbamidomethyl (C))PDGSD_ ENSG00000154646|ENST00000284885|TMPRSS15 5.731851221503515 0.7001233259664787 3 {[DA]|[EG]}V 3 -1 30.502 0.0 0.0 2.9094 0.0 0.0 0.0 760.2216185526837 760.2216185526837 14.387568628841262 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V 2.9094 + + 106 1 1.488 64983.4 1.0 3333 5209 8534 HBL1_DMSO_200M_050219_1,8544 HBL1_DMSO_200M_050219_1,8544,GEVNCPDGSD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8545 45.067 152.0 482130.0 25 0 33069.0 + 2683 ATDSTAYQSY 10 117 553.7333714136377 1105.4521898940752 2 553.7343017458916 MULTI CID FTMS 0 0 0 8534 502873.3125 0.4855411327617293 -1 0.1115531921386718 11 Unmodified _ATDSTAYQSY_ REV__ENSG00000176406|ENST00000696799|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-1|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-2|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-3|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-4|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-5|RIMS2;REV__nc|ENSG00000176406|Q9UQ26-8|RIMS2;REV__nc|ENSG00000176406|Q9UQ26|RIMS2 17.11289562659939 0.5604042439455784 3 {[DA]|[EG]}TSQ{I|L}H{M(Oxidation (M))|F} 8 -1 58.464 0.0 0.0 5.2887 0.0 0.0 0.0 203.0582979791625 203.0582979791625 25.83943233895019 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.5 {[DA]|[EG]}TSQ{I|L}H{M(Oxidation (M))|F} 5.2887 - 778 + 1 1.488 61342.3 1.0 3334 5209 8534 HBL1_DMSO_200M_050219_1,8545 HBL1_DMSO_200M_050219_1,8545,ATDSTAYQSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8546 45.075 481.0 350280.0 25 0 33126.0 8626 EVEEDEYKAFY 11 143 711.3075021407702 1420.6004513483404 2 711.3081542849541 MULTI CID FTMS 0 0 0 8534 357312.5 0.3487786494024184 -1 0.1115531921386718 12 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 17.11289562659939 0.6791789249425932 3 [HD]EAQAGAQNA{M(Oxidation (M))|F}Y 13 9 + 104.01 0.0 0.0 7.3214 7.3214 80.041 0.0 0.0 0.0 0.7210667880990655 11.448658907276368 0.7210667880990655 0.3218468337140194 0 1.218765315847925 0.958607314841775 1.5941876774005248 2.059894379144197 [HD]EAQAGAQNA{M(Oxidation (M))|F}Y;[HD]EAQAGAGANA{M(Oxidation (M))|F}Y;[QA]HDEAGAQNA{M(Oxidation (M))|F}Y;[QA]HDEAGAGANA{M(Oxidation (M))|F}Y;[HD][QA]EAGAQNA{M(Oxidation (M))|F}Y;[HD]EAQAGAQGGA{M(Oxidation (M))|F}Y;[HD][QA]EAGAGANA{M(Oxidation (M))|F}Y;[HD]EAQAGAGAGGA{M(Oxidation (M))|F}Y;[AG]AHDEAQQNA{M(Oxidation (M))|F}Y;[AG]AHDEAGAQNA{M(Oxidation (M))|F}Y 7.3214;7.2987;7.2706;7.248;7.2012;7.1959;7.1785;7.1748;7.1736;7.1631 -;-;-;-;-;-;-;-;-;- 89340 1 1.488 120563.2 1.0 3335 5209 8534 HBL1_DMSO_200M_050219_1,8546 HBL1_DMSO_200M_050219_1,8546,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8547 45.086 642.0 331350.0 25 0 37026.0 + 16400 IYQSKVREL 9 229 379.2207628907981 1134.6404592725944 3 379.2208740115166 MULTI CID FTMS 0 0 0 8534 265339.875 1.0 0 0.0 13 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 40.23920728925047 0.0741434193262949 3 {I|L}YQSKV{[RE]|[WV]}{I|L} 9 0 + 68.726 0.0 0.0 6.057 6.057 82.444 0.0 0.0 0.0 50.18191981982554 1.2759543270729807 1.2759543270729807 4.074769491456962 0 0.3494850021680094 1.3979400086720375 0.7742275032520141 0.8807196863200843 + + {I|L}YQSKV{[RE]|[WV]}{I|L};{I|L}YQSKV[W{I|L}]V;{I|L}Y[AG]SKV{[RE]|[WV]}{I|L};{I|L}Y[AG]SKV[W{I|L}]V;{I|L}Y{[QN]|[E{I|L}]|[KN]}TV{[RE]|[WV]}{I|L};{I|L}YQ{I|L}[KQ][KS]Q;{I|L}Y{[QN]|[E{I|L}]|[KN]}{I|L}[R{I|L}]C{I|L};{I|L}Y{[QN]|[E{I|L}]|[KN]}TV[W{I|L}]V;{I|L}{I|L}[YE]TV{[RE]|[WV]}{I|L};{I|L}{I|L}[YE]{I|L}[R{I|L}]C{I|L} 6.057;5.6979;5.2455;4.8864;3.5045;3.4887;3.4534;2.915;2.1548;2.1037 +;-;-;-;-;-;-;-;-;- + 537 + 1 1.488 168417.0 1.0 3336 5209 8534 HBL1_DMSO_200M_050219_1,8547 HBL1_DMSO_200M_050219_1,8547,IYQSKVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8548 45.09 177.0 295640.0 25 0 14360.0 -1 MFLSFPTTK 9 87 544.2785450029007 0 544.2750121951103 PEAK CID FTMS 0 0 0 8534 254383.546875 0.0836082675897257 -5 0.4043197631835937 14 Oxidation (M) _M(Oxidation (M))FLSFPTTK_ CON__P01966;ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;ENST00000487791.1_1_16:226802-227261:+|nuORF 6.723162845929126 0.3444685223463734 3 S 1 -1 9.2917 0.0 0.0 0.85517 0.0 0.0 913.4734738175216 83.01462732486561 996.4881011423872 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 S 0.85517 + + 12 + 1 1.488 48968.6 1.0 3337 5209 8534 HBL1_DMSO_200M_050219_1,8548 HBL1_DMSO_200M_050219_1,8548,MFLSFPTTK False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8549 45.1 584.0 191130.0 25 0 16203.0 + 11526 GIPEKDLHSV 10 139 547.7949047259546 1093.575256518709 2 547.7950317263603 MULTI CID FTMS 0 0 0 8534 164328.859375 0.2870616277099457 7 -0.5861320495605469 15 Unmodified _GIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 20.41453444215458 0.5050059513928961 3 {[VA]|[{I|L}G]}PE 4 6 33.461 0.0 0.0 3.0598 0.0 0.0 0.0 694.3540133111936 694.3540133111936 15.36290898349982 0.0 0.0 0.0 0 0.2302046884880938 1.5228787452803376 0.4247425010840047 0.0 + {[VA]|[{I|L}G]}PE 3.0598 + + 407 + 1 1.488 91056.8 1.0 3338 5209 8534 HBL1_DMSO_200M_050219_1,8549 HBL1_DMSO_200M_050219_1,8549,GIPEKDLHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8550 45.111 653.0 71240.0 25 0 5442.0 -1 0 48 717.3212255399148 3581.569745366574 5 717.9266845583916 MULTI CID FTMS 0 0 0 8534 124118.7421875 0.4832620996825786 2 -0.2089767456054687 16 3 R 1 -1 6.9897 0.0 0.0 0.19516 0.0 0.0 55.885127301923895 3366.514328995468 3422.399456297392 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.19516 - 11 + 1 1.488 42195.5 1.0 3339 5209 8534 HBL1_DMSO_200M_050219_1,8550 HBL1_DMSO_200M_050219_1,8550, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8551 45.123 622.0 122910.0 25 0 10153.0 + 26032 NMHTCLGSPTL 11 123 587.27294806495 1172.5313431967 2 587.2735473513603 MULTI CID FTMS 0 0 0 8534 130604.734375 0.2952638337381242 2 -0.2089767456054687 17 Unmodified _NMHTCLGSPTL_ REV__ENST00000337002.8_1_3:169710459-169710531:+|nuORF 13.042465956692816 0.7638483625850725 3 TTS 3 -1 20.534 0.0 0.0 1.7513 0.0 0.0 717.3307949562687 163.05172144107658 880.3825163973453 0.0 0.0 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 TTS 1.7513 - 334 + 1 1.488 61732.7 1.0 3340 5209 8534 HBL1_DMSO_200M_050219_1,8551 HBL1_DMSO_200M_050219_1,8551,NMHTCLGSPTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8552 45.137 800.0 72864.0 25 0 8750.7 -1 0 76 1037.9749124221066 2073.9352719110134 2 1038.475756824017 MULTI CID FTMS 0 0 0 8534 87328.390625 0.0199830235274519 -2 0.1754989624023437 18 3 [NP]N{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M 7 -1 17.72 0.0 0.0 0.85441 0.0 0.0 0.0 1267.5610848180495 1267.5610848180495 10.730231979947646 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 [NP]N{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M 0.85441 - 305 1 1.488 49179.8 0.8700000047683716 3341 5209 8534 HBL1_DMSO_200M_050219_1,8552 HBL1_DMSO_200M_050219_1,8552, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8554 45.142 1.3 30492000.0 25 0 4126300.0 11272 GEVCCWLCI 9 60 513.2169239321389 1024.4192949310775 2 513.2180663943291 MULTI CID FTMS 0 0 0 8553 42319328.0 0.7447275024842829 1 -0.1137275695800781 1 Unmodified _GEVCCWLCI_ ENSG00000164082|ENST00000395052|GRM2;ENST00000296479.9_1_3:51747995-51752125:+|nuORF 12.531546534597751 0.4974689918368763 3 {[DA]|[EG]}V 3 6 30.942 0.0 0.0 3.0205 0.0 0.0 0.0 736.2633555602371 736.2633555602371 10.452490459521968 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}V 3.0205 + + 21 1 1.482 35392.1 1.0 3342 5210 8553 HBL1_DMSO_200M_050219_1,8554 HBL1_DMSO_200M_050219_1,8554,GEVCCWLCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8555 45.143 2.7 19114000.0 25 0 1890600.0 + 24954 MPPPPPQGV 9 82 460.2385793050109 918.462605676822 2 460.2391845583916 MULTI CID FTMS 0 0 0 8553 22117140.0 0.7347055190561813 -13 1.1297760009765625 2 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 59.79521254764295 0.0261954583213598 3 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 38.466 0.0 0.0 4.1881 4.1881 78.038 0.0 0.0 0.0 4.832881222565248 9.564856298445576 4.832881222565248 5.6246936830415 0 1.1237125054200234 0.0 0.2614393726401688 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{[HG]|PP}NNPPQR;[PS][HT]PPQR;[VG][EP]HPQR;{[HG]|PP}GGNPPQR;{[HG]|PP}NGGPPQR;[PS][TP]HPQR;{[HG]|PP}GGGGPPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR 4.1881;3.5757;3.0416;2.6271;2.5672;2.5672;2.1076;1.5647;1.0772;0.98138 -;-;-;-;-;-;-;-;-;- 195 1 1.482 43833.8 1.0 3343 5210 8553 HBL1_DMSO_200M_050219_1,8555 HBL1_DMSO_200M_050219_1,8555,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8556 45.144 4.6 11023000.0 25 0 1623000.0 + 1673 ALPDQGIAKA 10 67 492.2800065612653 982.5454601893308 2 492.2798950076103 MULTI CID FTMS 0 0 0 8553 12083865.0 0.6732871187101359 1 -0.1137275695800781 3 Unmodified _ALPDQGIAKA_ ENSG00000089289|ENST00000356413|IGBP1 36.506200033944 0.1944608063770638 3 [{I|L}A]PDQG{I|L}A[KA] 10 0 + 55.819 0.0 0.0 5.6811 5.6811 86.093 0.0 0.0 0.0 4.661903266879719 4.884381005764311 4.661903266879719 9.164539485499256 0 0.7429928190999391 2.0 0.0 0.3494850021680094 + + [{I|L}A]PDQG{I|L}A[KA];[{I|L}A]PD[AG]G{I|L}A[KA];[{I|L}A]PDQ[Q{I|L}][KA];[{I|L}A]PD[AG][Q{I|L}][KA];[{I|L}A][Y{I|L}][RH][NP] 5.6811;4.7484;4.6924;3.7552;1.9539 +;-;-;-;- + 106 + 1 1.482 47201.2 1.0 3344 5210 8553 HBL1_DMSO_200M_050219_1,8556 HBL1_DMSO_200M_050219_1,8556,ALPDQGIAKA False True ALPDQGIAKA 45.143902 492.27989500761 177791392.0 8553.0 ENSG00000089289|ENST00000356413|IGBP1 6.845735867818196 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8557 45.145 7.5 6779000.0 25 0 615860.0 + 22063 LPPPPQQKI 9 71 509.30879230611816 1016.6030316790363 2 509.3088256716728 MULTI CID FTMS 0 0 0 8553 7704144.0 0.9423766529814216 1 -0.1137275695800781 4 Unmodified _LPPPPQQKI_ ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 15.847184025352805 0.4077185912009129 3 {I|L}PPP 4 5 56.186 0.0 0.0 5.5268 0.0 0.0 0.0 609.3348997023418 609.3348997023418 41.77317490243958 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPP 5.5268 + + 104 + 1 1.482 51073.8 1.0 3345 5210 8553 HBL1_DMSO_200M_050219_1,8557 HBL1_DMSO_200M_050219_1,8557,LPPPPQQKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8558 45.146 23.0 1907000.0 25 0 414770.0 + 20225 LIDENDNKI 9 63 537.2772712180321 1072.539989502864 2 537.2775146365166 MULTI CID FTMS 0 0 0 8553 2124477.5 1.0 0 0.0 5 Unmodified _LLDEDNNIK_ nc|ENSG00000067064|Q13907|IDI1;ENSG00000067064|ENST00000381344|IDI1;ENST00000482091.1_1_10:1089912-1094811:-|nuORF 31.26834338654808 0.1333407332142048 3 {I|L}{I|L}DE[DN]N[K{I|L}] 9 0 + 71.176 0.0 0.0 6.6362 6.6362 89.755 0.0 0.0 0.0 64.186296826175 5.642492736872597 5.642492736872597 9.208187539523747 0 0.805462187404089 2.0 0.0 0.4247425010840047 + + {I|L}{I|L}DE[DN]N[K{I|L}];{I|L}{I|L}DE[DN]GG[K{I|L}] 6.6362;5.7777 +;- + 44 + 1 1.482 39052.1 1.0 3346 5210 8553 HBL1_DMSO_200M_050219_1,8558 HBL1_DMSO_200M_050219_1,8558,LLDEDNNIK False True LIDENDNKI 45.14626 537.277514636517 13205015.0 8553.0 nc|ENSG00000067064|Q13907|IDI1;;ENSG00000067064|ENST00000381344|IDI1;;ENST00000482091.1_1_10:1089912-1094811:-|nuORF 6.3696920077006025 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8559 45.147 43.0 1260300.0 25 0 64002.0 7675 EKMQEEEEK 9 75 590.2660622065343 1178.5175714798686 2 590.2664062380791 MULTI CID FTMS 0 0 0 8553 1469453.875 0.4909799031892226 1 -0.1137275695800781 6 Unmodified _EKMQEEEEK_ ENSG00000261649|ENST00000567390|GOLGA6L7 13.042465956692816 0.4836390050082244 3 HVDAAEK 7 7 56.362 0.0 0.0 4.7825 0.0 0.0 410.1403784431303 0.0 410.1403784431303 0.0 50.63563554718151 0.0 0.0 0 2.5924778212679485 0.0 0.4247425010840047 0.3494850021680094 HVDAAEK 4.7825 - 121 + 1 1.482 45512.3 1.0 3347 5210 8553 HBL1_DMSO_200M_050219_1,8559 HBL1_DMSO_200M_050219_1,8559,EKMQEEEEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8560 45.149 37.0 2372900.0 25 0 842200.0 + 4273 DAQLFQEV 8 94 317.1593783553004 0 317.1587707400322 PEAK CID FTMS 0 0 0 8553 1365445.625 0.5677267738841937 1 -0.1137275695800781 7 Unmodified _DAQLFQEV_ REV__ENSG00000121060|ENST00000316881|TRIM25 8.593279151180031 0.5573742999696857 3 VG 2 -1 6.4537 0.0 0.0 1.0207 0.0 0.0 405.1405818065009 68.05140100650624 473.1919828130071 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VG 1.0207 - 10 + 1 1.482 78302.1 1.0 3348 5210 8553 HBL1_DMSO_200M_050219_1,8560 HBL1_DMSO_200M_050219_1,8560,DAQLFQEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8561 45.15 53.0 1341800.0 25 0 121450.0 + 5678 DPHSFPRTV 9 104 352.51388526126686 1054.519826384001 3 352.5137512087822 MULTI CID FTMS 0 0 0 8553 970698.375 0.2404871526702059 -4 0.3792610168457031 8 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 8.155526934196011 0.6299788542272896 3 [WY]S{M(Oxidation (M))|F}PRS{I|L} 8 5 + 23.151 0.0 0.0 2.1954 2.1954 80.916 0.0 0.0 0.0 10.676842876257162 5.971842959810367 5.971842959810367 23.15109298465763 0 0.2742275032520141 1.0969100130080565 0.0 0.2887254899964357 [WY]S{M(Oxidation (M))|F}PRS{I|L} 2.1954 - 103 + 1 1.482 63731.7 1.0 3349 5210 8553 HBL1_DMSO_200M_050219_1,8561 HBL1_DMSO_200M_050219_1,8561,DPHSFPRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8562 45.153 121.0 629000.0 25 0 76322.0 + 29213 QGLEMPGYDC 10 95 556.7238679276599 1111.4331829221196 2 556.7244750857353 MULTI CID FTMS 0 0 0 8553 690272.8125 0.946285830909006 5 -0.3904304504394531 9 Unmodified _QGLEMPGYDC_ REV__ENST00000475441.5_1_1:28905145-28906492:-|nuORF;REV__nc|ENSG00000197989|Q9BXW3|SNHG12 17.11289562659939 0.5604042439455784 3 {[QG]|[NA]}{I|L}ET{M(Oxidation (M))|F}P 7 -1 45.035 0.0 0.0 4.052 0.0 0.0 0.0 336.0701082818969 336.0701082818969 20.205903952887496 0.0 0.0 0.0 0 1.1435078169319297 2.0 0.0 0.0 {[QG]|[NA]}{I|L}ET{M(Oxidation (M))|F}P 4.052 - 171 + 1 1.482 64763.4 1.0 3350 5210 8553 HBL1_DMSO_200M_050219_1,8562 HBL1_DMSO_200M_050219_1,8562,QGLEMPGYDC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8563 45.161 498.0 169370.0 25 0 7442.3 + -1 SRPDSILGMQF 11 114 633.8106223050883 1265.6066916769764 2 633.8104736208916 MULTI CID FTMS 0 0 0 8553 306549.78125 0.0595544923022048 3 -0.2736282348632812 10 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 32.78568957990786 0.3235288296534633 3 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 63.822 0.0 0.0 5.0428 5.0428 79.043 0.0 0.0 0.0 0.7918124604762511 49.21835643169331 0.7918124604762511 4.062959475437751 0 1.0044321917401078 0.0 0.3807196863200844 2.234636880228201 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[HG]|PP}A[KS]HHA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[RH]{M(Oxidation (M))|F}A[KG][Y{I|L}]Q{M(Oxidation (M))|F} 5.0428;4.7218;4.3187;4.3187;3.9977;3.9977;3.5974;3.2764;2.7219;2.6452 -;-;-;-;-;-;-;-;-;- 932 1 1.482 68367.4 1.0 3351 5210 8553 HBL1_DMSO_200M_050219_1,8563 HBL1_DMSO_200M_050219_1,8563,SRPDSILGMQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8564 45.164 127.0 410580.0 25 0 32122.0 + 3924 DALKEKVI 8 103 458.27913073188864 914.5437085305772 2 458.2800475955009 MULTI CID FTMS 0 0 0 8553 285196.0625 0.0621504668976638 3 -0.2736282348632812 11 Unmodified _DALKEKVI_ ENSG00000168906|ENST00000306434|MAT2A;nc|ENSG00000168906|P31153-2|MAT2A 32.30548876998284 0.3644845974844379 3 {[DA]|[EG]}{I|L}{[SA]|[TG]}VP 7 4 26.177 0.0 0.0 2.8623 0.0 0.0 0.0 258.18430846637733 258.18430846637733 12.197369754785257 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.1747425010840047 0.0 {[DA]|[EG]}{I|L}{[SA]|[TG]}VP 2.8623 - 151 1 1.482 44998.5 1.0 3352 5210 8553 HBL1_DMSO_200M_050219_1,8564 HBL1_DMSO_200M_050219_1,8564,DALKEKVI False True DALKEKVI 45.163929 458.280047595501 20939938.25 8553.0 nc|ENSG00000168906|P31153-2|MAT2A;;ENSG00000168906|ENST00000306434|MAT2A 1.8887627124786377 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8565 45.173 514.0 236040.0 25 0 10923.0 + 16399 IYQSKVREL 9 133 568.3270181633135 1134.6394833934269 2 568.3272582888603 MULTI CID FTMS 0 0 0 8553 251366.203125 1.0 0 0.0 12 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 34.93206674587334 0.1032771302489716 3 YQSKV[PA]Y 8 4 41.86 0.0 0.0 3.6893 0.0 0.0 113.0796652645616 82.06696497134999 195.1466302359116 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.3494850021680094 0.4247425010840047 YQSKV[PA]Y 3.6893 - 291 + 1 1.482 98308.5 1.0 3353 5210 8553 HBL1_DMSO_200M_050219_1,8565 HBL1_DMSO_200M_050219_1,8565,IYQSKVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8566 45.182 527.0 180440.0 25 0 11838.0 -1 DPNECLICH 9 135 579.2388905666651 1156.46322820013 2 579.2392455935478 MULTI CID FTMS 0 0 0 8553 243103.703125 0.2739338830473102 3 -0.2736282348632812 13 2 Carbamidomethyl (C) _DPNEC(Carbamidomethyl (C))LIC(Carbamidomethyl (C))H_ ENSG00000101115|ENST00000217086|SALL4 32.30548876998284 0.1201446275138228 3 [DP]NST{M(Oxidation (M))|F}R 7 -1 60.956 0.0 0.0 5.2709 0.0 0.0 0.0 336.0708101861938 336.0708101861938 39.9869705092754 0.0 0.0 0.0 0 1.0189301784845295 1.6989700043360187 0.0 0.4247425010840047 [DP]NST{M(Oxidation (M))|F}R 5.2709 - 705 + 1 1.482 74723.3 1.0 3354 5210 8553 HBL1_DMSO_200M_050219_1,8566 HBL1_DMSO_200M_050219_1,8566,DPNECLICH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8567 45.192 581.0 213630.0 25 0 52168.0 + -1 MYYVRSCMMW 10 81 713.7903249754689 0 713.7903930544853 PEAK CID FTMS 0 0 0 8553 234132.015625 1.0 0 0.0 14 Carbamidomethyl (C) _MYYVRSC(Carbamidomethyl (C))MMW_ REV__ENST00000427898.5_3_10:1088669-1094239:-|nuORF 3.5964929083625545 0.3961065659209837 3 SN 2 -1 7.6908 0.0 0.0 0.53949 0.0 0.0 195.94970154765025 1025.5202719451895 1221.46997349284 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 SN 0.53949 - 19 + 1 1.482 90703.8 1.0 3355 5210 8553 HBL1_DMSO_200M_050219_1,8567 HBL1_DMSO_200M_050219_1,8567,MYYVRSCMMW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8568 45.202 561.0 308390.0 25 0 17060.0 + 14925 ILMEHIHKL 9 207 575.3254824804791 1148.636412027758 2 575.3246337771416 MULTI CID FTMS 0 0 0 8553 202662.03125 1.0 0 0.0 15 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 79.59630418116434 0.0176145593575188 3 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L} 9 0 + 97.995 0.0 0.0 8.5314 8.5314 91.708 0.0 0.0 0.0 36.47817481888638 7.162271788417556 7.162271788417556 7.162271788417556 0 2.217900182820548 2.0 1.1237125054200234 0.1643943297944484 + + {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}H{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}[C(Carbamidomethyl (C))R]K{I|L};{I|L}{I|L}{M(Oxidation (M))|F}S[WK]DK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}[C(Carbamidomethyl (C))R]{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}S[WK]D{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}[WK]DK;{I|L}{I|L}{M(Oxidation (M))|F}SMK[WP]K;{I|L}{I|L}{M(Oxidation (M))|F}EHHK{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}S[WK]{I|L}DK 8.5314;7.9079;6.0096;6.0096;5.386;5.386;4.7145;4.5072;4.4753;4.383 +;-;-;-;-;-;-;-;-;- + 3650 + 1 1.482 129687.2 1.0 3356 5210 8553 HBL1_DMSO_200M_050219_1,8568 HBL1_DMSO_200M_050219_1,8568,ILMEHIHKL True False ILMEHIHKL 45.202325 575.324633777142 5542421.375 8553.0 ENSG00000108298|ENST00000225430|RPL19;;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;;ENST00000432746.1_1_7:102781798-102782185:-|nuORF 6.170809268951416 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8569 45.213 615.0 171460.0 25 0 47041.0 3956 DALLKNQRRAQ 11 116 656.8742224190988 1311.7338919049976 2 657.3084594607353 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _DALLKNQRRAQ_ ENSG00000151304|ENST00000339397|SRFBP1 13.042465956692816 0.7638483625850725 3 {[DA]|[EG]}{I|L}{I|L}D 5 7 21.805 0.0 0.0 1.6623 0.0 0.0 0.0 781.4525558056413 781.4525558056413 3.3129742992745683 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.7614393726401688 0.0 {[DA]|[EG]}{I|L}{I|L}D 1.6623 - 532 1 1.482 82648.6 1.0 3357 5210 8553 HBL1_DMSO_200M_050219_1,8569 HBL1_DMSO_200M_050219_1,8569,DALLKNQRRAQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8570 45.226 662.0 71670.0 25 0 5552.0 -1 SDHHTMCYCED 11 60 678.7186388182519 0 678.9161254763603 PEAK CID FTMS 0 0 0 8553 128079.2890625 0.9115249984876628 1 -0.1137275695800781 17 Oxidation (M) _SDHHTM(Oxidation (M))CYCED_ ENSG00000110799|ENST00000261405|VWF 0.0 0.4761840153648598 3 NQQ 3 -1 13.188 0.0 0.0 0.97295 0.0 0.0 233.99762812302865 748.2546480768186 982.2522761998472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NQQ 0.97295 - 11 + 1 1.482 43243.2 1.0 3358 5210 8553 HBL1_DMSO_200M_050219_1,8570 HBL1_DMSO_200M_050219_1,8570,SDHHTMCYCED False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8571 45.239 721.0 123290.0 25 0 5672.2 + -1 GAVPCELKLP 10 128 542.2981182717102 0 542.3304321169853 PEAK CID FTMS 0 0 0 -1 0 18 Carbamidomethyl (C) _GAVPC(Carbamidomethyl (C))ELKLP_ REV__ENST00000411630.6_2_4:53579063-53579750:+|nuORF;REV__ENST00000444958.1_1_4:53579063-53580379:+|nuORF;REV__nc|ENSG00000226950|P0C864|DANCR 4.3292370932331545 0.3961065659209837 3 T 1 -1 6.9897 0.0 0.0 0.64565 0.0 0.0 97.18363420638408 881.3205222266754 978.5041564330596 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.64565 - 23 + 1 1.482 76021.9 1.0 3359 5210 8553 HBL1_DMSO_200M_050219_1,8571 HBL1_DMSO_200M_050219_1,8571,GAVPCELKLP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8572 45.251 725.0 311450.0 25 0 11988.0 + 20755 LLSSYFLHIWL 11 203 696.3880493044853 0 696.3880493044853 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _LLSSYFLHIWL_ REV__ENSG00000184564|ENST00000647374|SLITRK6 10.073929032068715 0.4495801685015257 3 A{I|L}SA{I|L}SD{I|L}HAH 11 -1 48.967 0.0 0.0 3.5209 0.0 0.0 129.0834259013305 143.08283411197502 272.16626001330553 0.0 0.0 0.0 0.0 0 0.2215141619232908 0.0 0.6747425010840047 0.0 A{I|L}SA{I|L}SD{I|L}HAH 3.5209 - 10573 + 1 1.482 166840.5 1.0 3360 5210 8553 HBL1_DMSO_200M_050219_1,8572 HBL1_DMSO_200M_050219_1,8572,LLSSYFLHIWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8574 45.255 32.0 837100.0 25 0 112770.0 + 6701 RFQSSAVM 8 48 463.2311693116779 924.4477856901558 2 463.2314330935478 MULTI CID FTMS 0 0 0 8573 714669.5625 0.0279716851436902 4 -0.276702880859375 1 Unmodified _ECLFLAVM_ ENSG00000275379|ENST00000616365|H3C11;ENSG00000277775|ENST00000618052|H3C7;ENSG00000197409|ENST00000356476|H3C4;ENSG00000197153|ENST00000359303|H3C12;ENSG00000278828|ENST00000685041|H3C10;ENSG00000203811|ENST00000369158|H3C14;ENSG00000275714|ENST00000613854|H3C1;ENSG00000168148|ENST00000366696|H3-4;nc|ENSG00000273213|Q5TEC6|H3-7;ENSG00000203852|ENST00000403683|H3C15;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENSG00000183598|ENST00000331491|H3C13 19.438996006549623 0.6237395211498085 3 VM 2 6 28.711 0.0 0.0 3.1058 0.0 0.0 676.3280479965996 0.0 676.3280479965996 0.0 20.639406530592268 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + VM 3.1058 + + 53 + 1 1.482 27587.8 1.0 3361 5211 8573 HBL1_DMSO_200M_050219_1,8574 HBL1_DMSO_200M_050219_1,8574,ECLFLAVM False False RFQSSAVM 45.255274 463.231433093548 564361632.0 8573.0 ENSG00000275379|ENST00000616365|H3C11;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000168148|ENST00000366696|H3-4;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13 3.0055917501449585 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8575 45.256 36.0 1326300.0 25 0 147370.0 + 44775 YPLSKAQTV 9 81 503.78250582572656 1005.5504587182533 2 503.7823364138603 MULTI CID FTMS 0 0 0 8573 1194369.5 0.1196315786152491 4 -0.276702880859375 2 Unmodified _YPLSKAQTV_ ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3 69.10491478415734 0.0214449631113747 3 YP{I|L}S 4 5 69.725 0.0 0.0 6.934 0.0 0.0 0.0 542.2946871393186 542.2946871393186 53.29328592495203 0.0 0.0 0.0 0 1.031234684152075 1.6989700043360187 1.1989700043360187 0.0 + YP{I|L}S 6.934 + + 131 + 1 1.482 44013.1 1.0 3362 5211 8573 HBL1_DMSO_200M_050219_1,8575 HBL1_DMSO_200M_050219_1,8575,YPLSKAQTV True True YPLSKAQTV 45.256451 503.78233641386 689014560.0 8573.0 nc|ENSG00000144218|P51826-2|AFF3;;ENSG00000144218|ENST00000672756|AFF3 6.614249388376872 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8576 45.258 0.77 13803000.0 25 0 2110600.0 + 40865 VLPWRWAW 8 26 557.302818269651 0 557.3029662966728 PEAK CID FTMS 0 0 0 8573 43773436.0 1.0 0 0.0 3 Unmodified _VLPWRWAW_ REV__ENST00000484651.5_1_4:1725148-1739714:+|nuORF 6.354104778181461 0.5763711549229614 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.482 16997.7 1.0 3363 5211 8573 HBL1_DMSO_200M_050219_1,8576 HBL1_DMSO_200M_050219_1,8576,VLPWRWAW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8577 45.259 6.8 652010.0 25 0 83352.0 -1 0 16 603.3022300903604 3011.4747681188014 5 603.7031127810478 MULTI CID FTMS 0 0 0 8573 11040847.0 1.0 0 0.0 4 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.482 15523.0 1.0 3364 5211 8573 HBL1_DMSO_200M_050219_1,8577 HBL1_DMSO_200M_050219_1,8577, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8578 45.26 3.4 2054700.0 25 0 517490.0 -1 0 15 835.4492091868476 1668.8838654404951 2 835.4495727419853 MULTI CID FTMS 0 0 0 8573 10876922.0 1.0 0 0.0 5 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.482 14151.8 1.0 3365 5211 8573 HBL1_DMSO_200M_050219_1,8578 HBL1_DMSO_200M_050219_1,8578, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8579 45.261 3.3 14409000.0 25 0 1840200.0 -1 0 71 600.0004067514204 1796.9793908544611 3 600.0010253787041 MULTI CID FTMS 0 0 0 8573 10794584.0 1.0 0 0.0 6 3 [{I|L}V]KQ{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K 16 -1 + 114.81 0.0 0.0 6.3891 6.3891 60.306 0.0 0.0 0.0 97.77687336854648 16.208012377633494 16.208012377633494 0.0 0 1.968765315847925 2.0 0.4247425010840047 0.3054621874040891 [{I|L}V]KQ{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]QK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]KK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]KQ{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V]KK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V]QK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V]K[AG]{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V][AG]K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]Q{M(Oxidation (M))|F}KSDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]K{M(Oxidation (M))|F}KSDG{I|L}AH{I|L}DN{I|L}K 6.3891;6.3891;6.3891;5.8875;5.8875;5.8875;5.8875;5.8875;5.8177;5.8177 -;-;-;-;-;-;-;-;-;- 1389 + 1 1.482 45280.1 1.0 3366 5211 8573 HBL1_DMSO_200M_050219_1,8579 HBL1_DMSO_200M_050219_1,8579, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8580 45.262 9.9 2231100.0 25 0 180040.0 -1 0 42 753.8765038617306 3011.4769095805223 4 754.3775512576103 MULTI CID FTMS 0 0 0 8573 8526378.0 0.7697340554032285 -1 0.1137275695800781 7 3 A{I|L}SA{I|L} 5 -1 24.949 0.0 0.0 0.82845 0.0 0.0 1749.7927797971222 803.3791722419077 2553.1719520390297 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}SA{I|L} 0.82845 - 43 + 1 1.482 27260.2 1.0 3367 5211 8573 HBL1_DMSO_200M_050219_1,8580 HBL1_DMSO_200M_050219_1,8580, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8581 45.264 8.2 1304100.0 25 0 109280.0 -1 0 31 790.1522418811182 0 789.9052001833916 PEAK CID FTMS 0 0 0 8573 69508.640625 0.1406925158292612 -1 0.1137275695800781 8 3 {I|L} 1 -1 6.9897 0.0 0.0 0.44287 0.0 0.0 660.8114747585652 801.3734224908811 1462.1848972494463 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.44287 - 4 + 1 1.482 14355.4 1.0 3368 5211 8573 HBL1_DMSO_200M_050219_1,8581 HBL1_DMSO_200M_050219_1,8581, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8582 45.265 16.0 415740.0 25 0 39822.0 -1 0 22 628.7218513075 3138.5728742044994 5 629.3217040896416 MULTI CID FTMS 0 0 0 8573 3911544.0 0.4966764699328094 -1 0.1137275695800781 9 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.482 16516.1 1.0 3369 5211 8573 HBL1_DMSO_200M_050219_1,8582 HBL1_DMSO_200M_050219_1,8582, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8583 45.266 15.0 1137000.0 25 0 111780.0 + 20795 LLVVYPWTQR 10 35 637.8665903033082 1273.7186276734162 2 637.8666869997978 MULTI CID FTMS 0 0 0 8573 3333409.0 1.0 0 0.0 10 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 15.248480904072842 0.5916873121453583 3 {I|L}{I|L}VVY 5 5 49.208 0.0 0.0 3.8633 0.0 0.0 0.0 683.3270125029817 683.3270125029817 49.20818753952375 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {I|L}{I|L}VVY 3.8633 + + 10 + 1 1.482 18894.0 1.0 3370 5211 8573 HBL1_DMSO_200M_050219_1,8583 HBL1_DMSO_200M_050219_1,8583,LLVVYPWTQR False True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8584 45.267 12.0 740160.0 25 0 74386.0 + 40005 VGDVQLLR 8 30 450.2697965538444 0 450.5026122927666 PEAK CID FTMS 0 0 0 8573 52747.1640625 0.8122952647509688 2 -0.1599006652832031 11 Unmodified _VGDVQLLR_ REV__ENSG00000170324|ENST00000374201|FRMPD2;REV__nc|ENSG00000150175|Q6IN97|FRMPD2B;REV__nc|ENSG00000170324|Q68DX3-2|FRMPD2;REV__nc|ENSG00000170324|Q68DX3-4|FRMPD2 0.7936320650641473 0.5979579398327216 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.482 15366.7 1.0 3371 5211 8573 HBL1_DMSO_200M_050219_1,8584 HBL1_DMSO_200M_050219_1,8584,VGDVQLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8585 45.268 28.0 385140.0 25 0 46238.0 -1 0 25 785.9005484253402 3139.5730878349605 4 786.1503173708916 MULTI CID FTMS 0 0 0 8573 2013004.0 0.3096862290899712 -1 0.1137275695800781 12 3 SA{I|L}RQ 5 -1 24.949 0.0 0.0 0.79465 0.0 0.0 2062.025310590623 519.2235201471311 2581.2488307377544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SA{I|L}RQ 0.79465 - 38 + 1 1.482 20951.0 1.0 3372 5211 8573 HBL1_DMSO_200M_050219_1,8585 HBL1_DMSO_200M_050219_1,8585, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8586 45.269 25.0 998110.0 25 0 134720.0 9433 FLAFKKKHYA 10 43 626.8618268100897 0 626.8616210818291 PEAK CID FTMS 0 0 0 8573 1877049.125 1.0 0 0.0 13 Unmodified _FLAFKKKHYA_ ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400 10.823927491677226 0.3685635357628707 3 ASV 3 9 24.693 0.0 0.0 1.9727 0.0 0.0 260.1541881719432 731.394215658006 991.5484038299492 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 ASV 1.9727 - 16 + 1 1.482 25868.5 1.0 3373 5211 8573 HBL1_DMSO_200M_050219_1,8586 HBL1_DMSO_200M_050219_1,8586,FLAFKKKHYA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8587 45.271 19.0 476850.0 25 0 84098.0 + -1 WTRRPCKLYQW 11 24 797.4090670346072 1592.8035811360144 2 797.4099609255791 MULTI CID FTMS 0 0 0 8573 1846905.875 1.0 0 0.0 14 Carbamidomethyl (C) _WTRRPC(Carbamidomethyl (C))KLYQW_ REV__ENST00000358550.6_1_14:72055958-72056012:+|nuORF 0.0 0.8751479354844584 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.482 14058.7 1.0 3374 5211 8573 HBL1_DMSO_200M_050219_1,8587 HBL1_DMSO_200M_050219_1,8587,WTRRPCKLYQW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8588 45.272 34.0 240460.0 25 0 17836.0 -1 0 21 733.4106843298282 2197.2102235896846 3 733.7457763552666 MULTI CID FTMS 0 0 0 8573 1489938.125 1.0 0 0.0 15 3 Y 1 -1 6.9897 0.0 0.0 0.31812 0.0 0.0 1414.8560921992375 616.2696016900999 2031.1256938893373 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.31812 - 3 + 1 1.482 16742.4 1.0 3375 5211 8573 HBL1_DMSO_200M_050219_1,8588 HBL1_DMSO_200M_050219_1,8588, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8589 45.273 36.0 1057800.0 25 0 143620.0 + 3601 DAAPAPASI 9 63 812.415019005413 811.407742538813 1 812.4149658083916 MULTI CID FTMS 0 0 0 8573 1065320.625 0.4310602691758018 -3 0.3205299377441406 16 Unmodified _DAAPAPASI_ ENSG00000163516|ENST00000323348|ANKZF1;ENST00000461731.5_1_2:220094544-220099084:+|nuORF;ENST00000464763.5_1_2:220094544-220095147:+|nuORF;ENST00000474225.5_1_2:220094544-220097914:+|nuORF;ENST00000486203.5_1_2:220094592-220097474:+|nuORF 41.8396318013385 0.0653578398400075 3 WA 2 8 29.222 0.0 0.0 3.6014 0.0 0.0 0.0 551.2841678924467 551.2841678924467 13.931218991068516 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 WA 3.6014 - 112 + 1 1.482 31981.6 1.0 3376 5211 8573 HBL1_DMSO_200M_050219_1,8589 HBL1_DMSO_200M_050219_1,8589,DAAPAPASI True True DAAPAPASI 45.273007 812.414965808392 13720374.0 8573.0 ENST00000461731.5_1_2:220094544-220099084:+|nuORF;;ENSG00000163516|ENST00000323348|ANKZF1;;ENST00000486203.5_1_2:220094592-220097474:+|nuORF;;ENST00000474225.5_1_2:220094544-220097914:+|nuORF;;ENST00000464763.5_1_2:220094544-220095147:+|nuORF 5.19958511988322 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8590 45.274 24.0 724660.0 25 0 184240.0 -1 RRRQRWTRWQD 11 30 562.6326080074741 1684.8759946226223 3 562.6326171755791 MULTI CID FTMS 0 0 0 8573 1057918.125 1.0 0 0.0 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RRRQRWTRWQD_ chr6:2902865-2903201|23|11.91|0.19|5.97|-|0|None,SERPINB9|1 0.0 0.8751479354844584 3 YTS 3 -1 13.188 0.0 0.0 0.7827 0.0 0.0 780.4360644487701 550.2746676080686 1330.7107320568389 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YTS 0.7827 - 8 + 1 1.482 21939.2 1.0 3377 5211 8573 HBL1_DMSO_200M_050219_1,8590 HBL1_DMSO_200M_050219_1,8590,RRRQRWTRWQD False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 8591 45.275 47.0 268900.0 25 0 24359.0 + 20455 LLKKMAPYSLH 11 36 650.8747177199776 1299.7348825067552 2 650.8749877810478 MULTI CID FTMS 0 0 0 8573 1034278.4375 1.0 0 0.0 18 Unmodified _LLKKMAPYSLH_ REV__ENST00000537905.5_1_11:71735188-71747007:-|nuORF 1.3295316138638542 0.8688751186870782 3 V 1 -1 16.99 0.0 0.0 1.3072 0.0 0.0 948.4829731823396 249.16121851138908 1197.6441916937288 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 V 1.3072 - 5 + 1 1.482 18179.5 1.0 3378 5211 8573 HBL1_DMSO_200M_050219_1,8591 HBL1_DMSO_200M_050219_1,8591,LLKKMAPYSLH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8592 45.277 25.0 2088200.0 25 0 239640.0 -1 0 77 566.6335207384161 1696.878732815448 3 566.6336547732353 MULTI CID FTMS 0 0 0 8573 1003682.125 1.0 0 0.0 19 3 [{I|L}V]Q{M(Oxidation (M))|F}DD{[VA]|[{I|L}G]}AH{I|L}DN{I|L}K 15 -1 + 96.622 0.0 0.0 5.6941 5.6941 58.022 0.0 0.0 0.0 79.39010735934929 14.52452196856801 14.52452196856801 0.0 0 0.4247425010840047 2.0 0.5 0.3252574989159953 [{I|L}V]Q{M(Oxidation (M))|F}DD{[VA]|[{I|L}G]}AH{I|L}DN{I|L}K;[{I|L}V]K{M(Oxidation (M))|F}DD{[VA]|[{I|L}G]}AH{I|L}DN{I|L}K;[{I|L}V]K{M(Oxidation (M))|F}DD[Q{I|L}]H{I|L}DN{I|L}K;[{I|L}V]Q{M(Oxidation (M))|F}DD[Q{I|L}]H{I|L}DN{I|L}K;[{I|L}V]Q{M(Oxidation (M))|F}D{[RE]|[WV]}AH{I|L}DN{I|L}K;[{I|L}V][AG]{M(Oxidation (M))|F}DD{[VA]|[{I|L}G]}AH{I|L}DN{I|L}K;[{I|L}V]K{M(Oxidation (M))|F}DD{[VA]|[{I|L}G]}AH{I|L}DGG{I|L}K;[{I|L}V]Q{M(Oxidation (M))|F}DD{[VA]|[{I|L}G]}AH{I|L}DGG{I|L}K;[{I|L}V]K{M(Oxidation (M))|F}DD[Q{I|L}]H{I|L}DGG{I|L}K;[{I|L}V]Q{M(Oxidation (M))|F}D{[RE]|[WV]}AH{I|L}DGG{I|L}K 5.6941;5.6941;5.2998;5.2998;5.2998;5.1619;5.1619;5.1619;4.7665;4.7665 -;-;-;-;-;-;-;-;-;- 372 + 1 1.482 45963.0 1.0 3379 5211 8573 HBL1_DMSO_200M_050219_1,8592 HBL1_DMSO_200M_050219_1,8592, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8593 45.278 50.0 2824200.0 25 0 155850.0 15818 ISGQEGMQV 9 141 474.7261702176341 947.4377875020682 2 475.2279235720634 MULTI CID FTMS 0 0 0 8573 938855.25 0.2651747510478877 1 -0.0270767211914062 20 Unmodified _ISGQEGMQV_ ENST00000517815.1_1_5:160030929-160033886:-|nuORF 21.74664581756881 0.2544899275067181 3 {[QS]|[NT]}A{M(Oxidation (M))|F}{[ET]|[MV]}V 7 5 22.329 0.0 0.0 2.3568 0.0 0.0 0.0 182.03822216424604 182.03822216424604 1.7832600202834217 0.0 0.0 0.0 0 0.0 0.638272163982407 0.0 0.4731975075880329 {[QS]|[NT]}A{M(Oxidation (M))|F}{[ET]|[MV]}V 2.3568 - 612 1 1.482 110788.6 1.0 3380 5211 8573 HBL1_DMSO_200M_050219_1,8593 HBL1_DMSO_200M_050219_1,8593,ISGQEGMQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8595 45.286 308.0 3540900.0 25 0 125500.0 -1 0 243 1004.832702169504 3011.476277108712 3 1005.167407214642 MULTI CID FTMS 0 0 0 8594 4558999.0 1.0 0 0.0 1 3 VADA{I|L}TNAYAHQH{M(Oxidation (M))|F}PNAKHAVANEVQ[VP] 28 -1 + 215.42 0.0 0.0 7.1534 7.1534 62.465 0.0 0.0 0.0 93.216423724124 4.280303875089743 4.280303875089743 0.0 0 3.8935078169319297 0.0 3.5757659435244733 2.7658715643802765 VADA{I|L}TNAYAHQH{M(Oxidation (M))|F}PNAKHAVANEVQ[VP];VADA{I|L}TNAYAHKH{M(Oxidation (M))|F}PNAKHAVANEVQ[VP];VADA{I|L}TNAYAHKH{M(Oxidation (M))|F}PNAKHAVANE{I|L}N[VP];VADA{I|L}TNAYAHQH{M(Oxidation (M))|F}PNAKHAVANE{I|L}N[VP];VADA{I|L}TNAYA[TA]DD{M(Oxidation (M))|F}PNAKHAVANEVQ[VP];VADA{I|L}TNAYAHKH{M(Oxidation (M))|F}PNAGAHAVANEVQ[VP];VADA{I|L}TNAYAHQH{M(Oxidation (M))|F}PNAGAHAVANEVQ[VP];VWA{I|L}TNAYASNANP{M(Oxidation (M))|F}DDVHAVANEVQ[VP];VAW{I|L}TNAYASNANP{M(Oxidation (M))|F}DDVHAVANEVQ[VP];VADA{I|L}TNAYA[TA]DD{M(Oxidation (M))|F}PNAKHAVANE{I|L}N[VP] 7.1534;7.1534;7.1048;7.1048;7.0508;7.0346;7.0346;7.0195;7.0119;7.0022 -;-;-;-;-;-;-;-;-;- 750000 + 1 1.482 672232.5 1.0 3381 5212 8594 HBL1_DMSO_200M_050219_1,8595 HBL1_DMSO_200M_050219_1,8595, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8596 45.288 85.0 378390.0 25 0 29017.0 -1 0 60 593.003719417449 1775.9893288525468 3 593.0042602419853 MULTI CID FTMS 0 0 0 8594 3830255.75 1.0 0 0.0 2 3 {I|L}{I|L} 2 -1 40.969 0.0 0.0 2.3068 0.0 0.0 0.0 1546.7892791259762 1546.7892791259762 6.074550232146692 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L} 2.3068 - 116 + 1 1.482 31383.8 1.0 3382 5212 8594 HBL1_DMSO_200M_050219_1,8596 HBL1_DMSO_200M_050219_1,8596, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8597 45.292 253.0 83202.0 25 0 22250.0 -1 0 30 1047.866381824017 0 1047.866381824017 PEAK CID FTMS 0 0 0 -1 0 3 3 W 1 -1 5.4846 0.0 0.0 0.26204 0.0 0.0 944.5281045880878 959.4238375299436 1903.951942118032 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.26204 - 7 + 1 1.482 22848.8 1.0 3383 5212 8594 HBL1_DMSO_200M_050219_1,8597 HBL1_DMSO_200M_050219_1,8597, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8598 45.297 243.0 69464.0 25 0 5973.0 -1 VDTRWRYMLMI 11 39 750.3799418875325 0 750.1316406130791 PEAK CID FTMS 0 0 0 8594 999025.0625 1.0 0 0.0 4 Oxidation (M) _VDTRWRYM(Oxidation (M))LMI_ ENSG00000168135|ENST00000303592|KCNJ4 0.3506318815782774 0.47618401536486 3 V 1 -1 5.4846 0.0 0.0 0.36594 0.0 0.0 898.4889964686212 498.1662386529906 1396.655235121612 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.36594 + + 1 + 1 1.482 22357.8 1.0 3384 5212 8594 HBL1_DMSO_200M_050219_1,8598 HBL1_DMSO_200M_050219_1,8598,VDTRWRYMLMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8599 45.301 232.0 285320.0 25 0 28247.0 7676 EKMQEEEEK 9 84 590.2660622065343 1178.5175714798686 2 590.3260986208916 MULTI CID FTMS 0 0 0 8594 61630.93359375 0.020592378110079 3 -0.2496261596679687 5 Unmodified _EKMQEEEEK_ ENSG00000261649|ENST00000567390|GOLGA6L7 16.149105407346934 0.3995459350917656 3 VDAAEK 6 7 44.602 0.0 0.0 3.7846 0.0 0.0 547.1986740466663 0.0 547.1986740466663 0.0 24.35972531752853 0.0 0.0 0 1.1861818737241734 0.0 0.0 0.0 VDAAEK 3.7846 - 330 1 1.482 55776.1 1.0 3385 5212 8594 HBL1_DMSO_200M_050219_1,8599 HBL1_DMSO_200M_050219_1,8599,EKMQEEEEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8600 45.306 264.0 217530.0 25 0 14907.0 -1 MFLLPCVHFLW 11 89 760.8749355359471 1519.735318138694 2 760.8795654177666 MULTI CID FTMS 0 0 0 8594 963608.8125 1.0 0 0.0 6 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))FLLPC(Carbamidomethyl (C))VHFLW_ ENST00000521844.1_1_8:8861643-8861781:+|nuORF 10.823927491677226 0.8099964156050846 3 {I|L}GYE 4 -1 30.79 0.0 0.0 2.026 0.0 0.0 336.11424798128706 718.3866671197874 1054.5009151010745 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 {I|L}GYE 2.026 - 442 + 1 1.482 50821.9 1.0 3386 5212 8594 HBL1_DMSO_200M_050219_1,8600 HBL1_DMSO_200M_050219_1,8600,MFLLPCVHFLW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8601 45.312 304.0 66899.0 25 0 8644.7 -1 0 42 889.0015136599541 0 889.0015136599541 PEAK CID FTMS 0 0 0 -1 0 7 3 VYV 3 -1 13.188 0.0 0.0 0.74255 0.0 0.0 1188.622737693556 223.14455591373283 1411.7672936072888 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VYV 0.74255 - 45 + 1 1.482 22321.1 1.0 3387 5212 8594 HBL1_DMSO_200M_050219_1,8601 HBL1_DMSO_200M_050219_1,8601, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8602 45.317 308.0 287970.0 25 0 15565.0 -1 0 113 757.8736796927531 3027.465612904612 4 758.1266967654228 MULTI CID FTMS 0 0 0 8594 727793.8125 1.0 0 0.0 8 3 A{I|L}SA{I|L}SD{I|L}HA[HK] 12 -1 60.856 0.0 0.0 2.0101 0.0 0.0 1765.794910855587 0.0 1765.794910855587 0.0 41.69006780958576 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 A{I|L}SA{I|L}SD{I|L}HA[HK] 2.0101 - 6499 + 1 1.482 68306.0 1.0 3388 5212 8594 HBL1_DMSO_200M_050219_1,8602 HBL1_DMSO_200M_050219_1,8602, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8603 45.323 333.0 57448.0 25 0 7058.0 22787 LQRWFCRLWFM 11 34 793.4008666872978 0 793.4008666872978 PEAK CID FTMS 0 0 0 -1 0 9 Unmodified _LQRWFCRLWFM_ nc|ENSG00000106829|Q04727-3|TLE4 0.3070304955306653 0.4761840153648598 3 W 1 10 3.9794 0.0 0.0 0.2511 0.0 0.0 791.3751453845581 604.3101900690061 1395.6853354535642 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 0.2511 + + 8 + 1 1.482 22438.2 1.0 3389 5212 8594 HBL1_DMSO_200M_050219_1,8603 HBL1_DMSO_200M_050219_1,8603,LQRWFCRLWFM False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8604 45.33 342.0 189640.0 25 0 25331.0 -1 0 94 849.4507169565815 1696.8868809799628 2 849.4523803591728 MULTI CID FTMS 0 0 0 8594 693815.3125 1.0 0 0.0 10 3 [TP]VA[VS]PS[Q{I|L}]DS{M(Oxidation (M))|F}E 14 -1 58.421 0.0 0.0 3.4428 0.0 0.0 0.0 236.13512874910057 236.13512874910057 35.51029995663981 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.4247425010840047 [TP]VA[VS]PS[Q{I|L}]DS{M(Oxidation (M))|F}E 3.4428 - 979 1 1.482 47745.1 1.0 3390 5212 8594 HBL1_DMSO_200M_050219_1,8604 HBL1_DMSO_200M_050219_1,8604, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8605 45.335 314.0 258860.0 25 0 7282.5 -1 0 107 634.5211922383645 3167.5695788588223 5 634.9222900271416 MULTI CID FTMS 0 0 0 8594 657148.5 1.0 0 0.0 11 3 {M(Oxidation (M))|F}{M(Oxidation (M))|F}EEA{I|L}SA{I|L}SD 11 -1 54.712 0.0 0.0 1.7273 0.0 0.0 1353.6843395713663 601.3204952819655 1955.004834853332 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F}EEA{I|L}SA{I|L}SD 1.7273 - 2132 + 1 1.482 66767.5 1.0 3391 5212 8594 HBL1_DMSO_200M_050219_1,8605 HBL1_DMSO_200M_050219_1,8605, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8606 45.338 34.0 4549100.0 25 0 615400.0 + -1 MVEVFKRSL 9 131 375.5436226376565 1123.6090385131697 3 375.5434142947197 MULTI CID FTMS 0 0 0 8594 564102.4375 0.1310889368712243 -2 0.1408042907714843 12 Oxidation (M) _M(Oxidation (M))VEVFKRSL_ REV__ENSG00000099365|ENST00000215095|STX1B;REV__ENSG00000106089|ENST00000222812|STX1A;REV__ENSG00000166900|ENST00000337979|STX3;REV__ENST00000496216.5_1_7:73115159-73120193:-|nuORF;REV__ENST00000533637.5_1_11:59556413-59568372:+|nuORF;REV__nc|ENSG00000099365|P61266-2|STX1B;REV__nc|ENSG00000106089|Q16623-2|STX1A;REV__nc|ENSG00000106089|Q16623-3|STX1A;REV__nc|ENSG00000166900|Q13277-2|STX3;REV__nc|ENSG00000166900|Q13277-3|STX3 29.43715596616401 0.1566398223704148 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][YR]VGS{I|L} 10 -1 + 43.605 0.0 0.0 3.8808 3.8808 71.089 0.0 0.0 0.0 2.1112982646886067 20.34373258366248 2.1112982646886067 1.2937092834840769 0 0.6989700043360187 2.0 0.3807196863200844 0.6109243748081782 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][YR]VGS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][YV]GRS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][YR]RS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][YV]GVGS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][YV]RGS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][YV]KGD{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][YV]GKD{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP][YR]KD{I|L};{[QN]|[E{I|L}]|[KN]}[HQ][KG]GVGS{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SY[KG]GRS{I|L} 3.8808;3.7657;3.7241;3.6544;3.609;3.1828;2.9149;2.8733;2.3845;2.3806 -;-;-;-;-;-;-;-;-;- 1219 1 1.482 128852.3 1.0 3392 5212 8594 HBL1_DMSO_200M_050219_1,8606 HBL1_DMSO_200M_050219_1,8606,MVEVFKRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8607 45.346 473.0 38579.0 25 0 8596.1 -1 0 40 632.1198877347624 3155.563056340812 5 632.3223754763603 MULTI CID FTMS 0 0 0 8594 554404.3125 1.0 0 0.0 13 3 M 1 -1 6.9897 0.0 0.0 0.2215 0.0 0.0 2297.9494221628806 723.5567721002561 3021.506194263137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.2215 - 12 + 1 1.482 25147.1 1.0 3393 5212 8594 HBL1_DMSO_200M_050219_1,8607 HBL1_DMSO_200M_050219_1,8607, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8608 45.355 519.0 124360.0 25 0 13833.0 -1 0 77 605.337261286839 604.3299848202389 1 606.7012817263603 MULTI CID FTMS 0 0 0 8594 142476.609375 0.5157713359629923 -14 1.1672897338867188 14 3 D 1 -1 2.2185 0.0 0.0 0.3671 0.0 0.0 144.18732842551077 342.09385095767817 486.28117938318894 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.3671 - 24 + 1 1.482 56701.8 1.0 3394 5212 8594 HBL1_DMSO_200M_050219_1,8608 HBL1_DMSO_200M_050219_1,8608, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8609 45.365 544.0 97468.0 25 0 15165.0 + -1 TIRCIHEKSQR 11 91 714.3811523318291 0 714.3811523318291 PEAK CID FTMS 0 0 0 -1 0 15 Carbamidomethyl (C) _TIRC(Carbamidomethyl (C))IHEKSQR_ REV__ENSG00000111879|ENST00000338891|FAM184A;REV__nc|ENSG00000111879|Q8NB25-2|FAM184A;REV__nc|ENSG00000111879|Q8NB25-3|FAM184A;REV__nc|ENSG00000111879|Q8NB25-4|FAM184A 4.897010918128616 0.4761840153648597 3 {I|L}A 2 -1 8.5835 0.0 0.0 0.60161 0.0 0.0 496.2699550763687 743.3363741510374 1239.606329227406 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A 0.60161 - 265 + 1 1.482 44014.4 1.0 3395 5212 8594 HBL1_DMSO_200M_050219_1,8609 HBL1_DMSO_200M_050219_1,8609,TIRCIHEKSQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8610 45.376 655.0 21442.0 25 0 2963.5 -1 0 29 999.8348266482352 0 999.8348266482352 PEAK CID FTMS 0 0 0 -1 0 16 3 P 1 -1 3.0989 0.0 0.0 0.15518 0.0 0.0 1010.61297587715 886.2856539361936 1896.898629813344 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.15518 - 1 + 1 1.482 19144.7 1.0 3396 5212 8594 HBL1_DMSO_200M_050219_1,8610 HBL1_DMSO_200M_050219_1,8610, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8611 45.388 605.0 92741.0 25 0 4896.0 + -1 LIVFLICPWF 10 93 654.3636385255134 0 654.3811523318291 PEAK CID FTMS 0 0 0 -1 0 17 Carbamidomethyl (C) _LIVFLIC(Carbamidomethyl (C))PWF_ REV__ENSG00000179869|ENST00000435803|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-2|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-4|ABCA13;REV__nc|ENSG00000179869|Q86UQ4|ABCA13 12.531546534597751 0.3556095723513364 3 VM 2 -1 17.078 0.0 0.0 1.307 0.0 0.0 226.16471330417977 847.3922213190061 1073.556934623186 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 VM 1.307 - 41 + 1 1.482 48297.6 1.0 3397 5212 8594 HBL1_DMSO_200M_050219_1,8611 HBL1_DMSO_200M_050219_1,8611,LIVFLICPWF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8612 45.399 640.0 58569.0 25 0 4849.2 -1 0 69 899.4987060427666 0 899.4987060427666 PEAK CID FTMS 0 0 0 -1 0 18 3 VWVV 4 -1 18.928 0.0 0.0 1.0533 0.0 0.0 915.5359730212768 395.1194246881469 1310.6553977094238 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VWVV 1.0533 - 64 + 1 1.482 34866.6 1.0 3398 5212 8594 HBL1_DMSO_200M_050219_1,8612 HBL1_DMSO_200M_050219_1,8612, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8613 45.4 17.0 1986500.0 25 0 144950.0 + 28287 IPRNQLQSV 9 75 527.8034546173491 1053.592356301498 2 527.8046752810478 MULTI CID FTMS 0 0 0 8594 340087.59375 0.0998591889294079 -2 0.1408042907714843 19 Unmodified _PRNQLQLSV_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4 19.256988751693697 0.3154191944385105 3 {I|L}{I|L}Q[VS] 5 5 18.188 0.0 0.0 1.7262 0.0 0.0 495.2509022443375 0.0 495.2509022443375 0.0 2.9710624853235146 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{I|L}Q[VS] 1.7262 - 30 1 1.482 31494.2 1.0 3399 5212 8594 HBL1_DMSO_200M_050219_1,8613 HBL1_DMSO_200M_050219_1,8613,PRNQLQLSV False True IPRNQLQSV 45.400334 527.804675281048 15460278.0 8594.0 ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4 5.240947405497233 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8614 45.411 596.0 32434.0 25 0 3574.6 -1 YFFDLWKEKML 11 46 768.3835327029228 0 768.3835327029228 PEAK CID FTMS 0 0 0 -1 0 20 Oxidation (M) _YFFDLWKEKM(Oxidation (M))L_ ENSG00000112290|ENST00000392589|WASF1;ENSG00000132970|ENST00000335327|WASF3;ENSG00000158195|ENST00000618852|WASF2;nc|ENSG00000132970|Q9UPY6-2|WASF3;nc|ENSG00000158195|Q9Y6W5-2|WASF2 1.1933415558491238 0.4761840153648598 3 GT{I|L}GH 5 -1 24.949 0.0 0.0 1.6256 0.0 0.0 400.1865467517456 666.3201387994749 1066.5066855512205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GT{I|L}GH 1.6256 - 38 + 1 1.482 24795.5 1.0 3400 5212 8594 HBL1_DMSO_200M_050219_1,8614 HBL1_DMSO_200M_050219_1,8614,YFFDLWKEKML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8616 45.415 5.8 11212000.0 25 0 1108700.0 + 24955 MPPPPPQGV 9 84 460.2385793050109 918.462605676822 2 460.2391845583916 MULTI CID FTMS 0 0 0 8615 13792419.0 0.4581680253611153 -10 0.8555831909179688 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 93.88341677533236 0.0134066622201488 3 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 55.182 0.0 0.0 6.0081 6.0081 77.685 0.0 0.0 0.0 1.1631940669488472 1.1631940669488472 1.1631940669488472 1.1631940669488472 0 2.2302046884880937 0.0 0.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;[VG]EHPPQR;[PS]THPPQR;[VG]EPHPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPP[AG]GV;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQGV;[PS]TPHPQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QGV;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR 6.0081;5.8815;5.2753;4.4281;4.3413;4.1797;3.6541;3.4941;3.2396;2.8278 -;+;-;-;-;-;-;-;-;- + 343 1 1.474 54303.8 1.0 3401 5213 8615 HBL1_DMSO_200M_050219_1,8616 HBL1_DMSO_200M_050219_1,8616,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8617 45.416 22.0 1792800.0 25 0 234420.0 + -1 GEVMSEMNL 9 61 513.2169239321389 1024.4192949310775 2 513.2180663943291 MULTI CID FTMS 0 0 0 8615 2534154.25 0.0445955655418826 4 -0.3359527587890625 2 Oxidation (M) _GEVM(Oxidation (M))SEMNL_ REV__ENSG00000083307|ENST00000646743|GRHL2;REV__nc|ENSG00000083307|Q6ISB3-2|GRHL2 15.847184025352805 0.4077185912009129 3 STT{I|L}{[RE]|[WV]} 6 -1 34.13 0.0 0.0 3.3316 0.0 0.0 319.0663014142594 0.0 319.0663014142594 0.0 1.6824376479242176 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 STT{I|L}{[RE]|[WV]} 3.3316 - 36 1 1.474 37153.6 1.0 3402 5213 8615 HBL1_DMSO_200M_050219_1,8617 HBL1_DMSO_200M_050219_1,8617,GEVMSEMNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8618 45.418 5.0 9958900.0 25 0 931540.0 -1 CTQWYRFAEIR 11 60 510.5828989486981 1528.7268674462944 3 510.5834533572197 MULTI CID FTMS 0 0 0 8615 10467155.0 0.4576678584714478 -1 0.1328239440917968 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))TQWYRFAEIR_ ENSG00000060339|ENST00000265872|CCAR1;nc|ENSG00000060339|Q8IX12-2|CCAR1 3.84590784869206 0.857002691623471 3 [HA]GVAGEYGAEA{I|L}ER 15 -1 [HA]GVAGE + + 87.165 23.46 3.7761 5.7018 5.7018 58.054 0.0 0.0 0.0 0.0 58.79977080076108 0.0 0.0 0 1.774227503252014 0.0 0.7302046884880937 1.0629529932484498 [HA]GVAGEYGAEA{I|L}ER 5.7018 - 2584 + 1 1.474 47525.5 1.0 3403 5213 8615 HBL1_DMSO_200M_050219_1,8618 HBL1_DMSO_200M_050219_1,8618,CTQWYRFAEIR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8619 45.419 24.0 3101600.0 25 0 299880.0 + -1 VGAHAGEYGAEALER 15 53 765.3704095660066 1528.7262661988132 2 765.3710815310478 MULTI CID FTMS 0 0 0 8615 3254565.5 0.790265038802823 -1 0.1328239440917968 4 Carbamidomethyl (C) _RMWC(Carbamidomethyl (C))MFTSVRR_ ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF 2.498486711656943 0.8633599123570009 3 [HA]GAVGT[WQ]EGAHAG 15 -1 81.029 0.0 0.0 5.3004 0.0 0.0 0.0 96.043843311419 96.043843311419 65.5441253206957 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 [HA]GAVGT[WQ]EGAHAG 5.3004 - 1002 1 1.474 60962.5 1.0 3404 5213 8615 HBL1_DMSO_200M_050219_1,8619 HBL1_DMSO_200M_050219_1,8619,RMWCMFTSVRR False False VGAHAGEYGAEALER 45.418721 765.371081531048 190972332.0 8615.0 ENSG00000206172|ENST00000320868|HBA1;;ENSG00000188536|ENST00000251595|HBA2;;ENST00000472694.1_1_16:226715-226811:+|nuORF 8.359760761260986 2.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8620 45.42 23.0 2577900.0 25 0 374510.0 + 32020 RVIEGDVVSA 10 58 522.7867389883523 0 522.7879516482353 PEAK CID FTMS 0 0 0 8615 2678053.0 0.5184751517763376 -1 0.1328239440917968 5 Unmodified _RVIEGDVVSA_ ENSG00000169756|ENST00000544547|LIMS1;ENSG00000256671|ENST00000632897|LIMS4;ENSG00000256977|ENST00000480744|LIMS3;ENST00000603767.1_1_2:111195993-111209584:-|nuORF;nc|ENSG00000169756|P48059-3|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059|LIMS1 22.65808497894818 0.2768617913208166 3 VS 2 8 20.886 0.0 0.0 2.0014 0.0 0.0 768.410531344089 86.02543054752186 854.4359618916109 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 + VS 2.0014 + + 24 + 1 1.474 58023.3 1.0 3405 5213 8615 HBL1_DMSO_200M_050219_1,8620 HBL1_DMSO_200M_050219_1,8620,RVIEGDVVSA False True RVIEGDVVSA 45.4199 522.787951648235 20111166.0 8615.0 ENSG00000169756|ENST00000544547|LIMS1;;nc|ENSG00000169756|P48059-5|LIMS1;;ENST00000603767.1_1_2:111195993-111209584:-|nuORF;;nc|ENSG00000169756|P48059-3|LIMS1;;nc|ENSG00000169756|P48059-4|LIMS1;;ENSG00000256977|ENST00000480744|LIMS3;;ENSG00000256671|ENST00000632897|LIMS4;;nc|ENSG00000169756|P48059|LIMS1 7.1784844398498535 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8621 45.421 23.0 4048100.0 25 0 807040.0 + 15362 IPNEKIRNI 9 85 366.22080650784426 1095.6405901237329 3 366.2205688357353 MULTI CID FTMS 0 0 0 8615 2375921.25 0.4001095706737582 -1 0.1328239440917968 6 Unmodified _IPNEKIRNI_ ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1 32.78568957990786 0.1150597335874693 3 {I|L}PNEK{I|L}RN{I|L} 9 0 + 76.491 0.0 0.0 6.9814 6.9814 87.528 0.0 0.0 0.0 48.074611434510615 8.416375079047498 8.416375079047498 6.192803136799171 0 0.0 0.8860566476931632 0.4247425010840047 0.75 + + {I|L}PNEK{I|L}RN{I|L};{I|L}PN{I|L}EKRN{I|L};{I|L}PNE{I|L}KRN{I|L};{I|L}PN{I|L}[SG]{I|L}RN{I|L};{I|L}PNEK{I|L}RGG{I|L};{I|L}PGGEK{I|L}RN{I|L};{I|L}PN{I|L}EKRGG{I|L};{I|L}PGG{I|L}EKRN{I|L};{I|L}PNE{I|L}KRGG{I|L};{I|L}PGGE{I|L}KRN{I|L} 6.9814;6.4162;6.3434;6.2137;6.141;6.141;5.5757;5.5757;5.503;5.503 +;-;-;-;-;-;-;-;-;- + 293 + 1 1.474 83233.8 1.0 3406 5213 8615 HBL1_DMSO_200M_050219_1,8621 HBL1_DMSO_200M_050219_1,8621,IPNEKIRNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8622 45.422 24.0 2958700.0 25 0 568630.0 + 3821 DAIRTSEI 8 80 452.7401894790335 903.4658260248668 2 452.7405273318291 MULTI CID FTMS 0 0 0 8615 2341535.5 0.198927067467834 -2 0.1599006652832031 7 Unmodified _DAIRTSEI_ ENSG00000143612|ENST00000368521|C1orf43;nc|nan|Q9BWL3-2|C1orf43;nc|nan|Q9BWL3-3|C1orf43 53.832793166522166 0.1212192986213991 3 {[DA]|[EG]}{I|L}RTSE{I|L} 8 0 + 58.096 0.0 0.0 6.4304 6.4304 86.252 0.0 0.0 0.0 16.689615513722202 14.706225184280797 14.706225184280797 6.505149978319906 0 1.3182503180159344 1.6989700043360187 0.6989700043360187 0.0 + + {[DA]|[EG]}{I|L}RTSE{I|L};{[DA]|[EG]}{I|L}RTTD{I|L};{[DA]|[EG]}{I|L}R[WM]{I|L};{[ES]|[DT]|[{I|L}C]}TR{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}GKTDE{I|L};{[QN]|[E{I|L}]|[KN]}GRTSE{I|L};[WM]R{I|L}GE{I|L};{[SA]|[TG]}[R{I|L}]TDE{I|L};[WM]R{I|L}AD{I|L};{[ES]|[DT]|[{I|L}C]}TR{I|L}AD{I|L} 6.4304;5.7104;4.8605;4.5831;4.5182;4.3297;4.2068;4.053;3.8736;3.8631 +;-;-;-;-;-;-;-;-;- + 314 1 1.474 59827.9 1.0 3407 5213 8615 HBL1_DMSO_200M_050219_1,8622 HBL1_DMSO_200M_050219_1,8622,DAIRTSEI True True DAIRTSEI 45.422259 452.740527331829 114175976.0 8615.0 nc|nan|Q9BWL3-2|C1orf43;;ENSG00000143612|ENST00000368521|C1orf43;;nc|nan|Q9BWL3-3|C1orf43 2.6798407236735025 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8623 45.423 31.0 3710100.0 25 0 477110.0 + 5679 DPHSFPRTV 9 120 352.51388526126686 1054.519826384001 3 352.5136901736259 MULTI CID FTMS 0 0 0 8615 1918920.625 0.4754059233965256 -1 0.1328239440917968 8 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 49.55428908609986 0.0413471690215031 3 [DP]HS{M(Oxidation (M))|F}PRTV 9 0 + 54.391 0.0 0.0 5.1579 5.1579 87.93 0.0 0.0 0.0 36.48580615643044 11.492984022228429 11.492984022228429 21.987862981240028 0 0.6549471895720984 0.744727494896694 0.7887254899964358 0.5451140161145328 + + [DP]HS{M(Oxidation (M))|F}PRTV;{[ET]|[MV]}[K{I|L}]{M(Oxidation (M))|F}SH{[HG]|PP};{[ET]|[MV]}[K{I|L}]{M(Oxidation (M))|F}S{M(Oxidation (M))|F}[PS];{[ET]|[MV]}[R{I|L}]D[WH]V 5.1579;3.0728;2.4316;0.6085 +;-;-;- + 148 + 1 1.474 101373.6 1.0 3408 5213 8615 HBL1_DMSO_200M_050219_1,8623 HBL1_DMSO_200M_050219_1,8623,DPHSFPRTV True True DPHSFPRTV 45.423436 352.513690173626 146297650.0 8615.0 ENSG00000107672|ENST00000369023|NSMCE4A;;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 10.356257756551107 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8624 45.425 46.0 1934900.0 25 0 183080.0 + 36500 TAELGIRHV 9 97 498.2849260479736 994.5552991627472 2 498.2851440310478 MULTI CID FTMS 0 0 0 8615 1377343.375 0.7045880226749676 -1 0.1328239440917968 9 Unmodified _TAELGIRHV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 69.33821966488729 0.021354776001734 3 TAE{I|L}G{I|L}RHV 9 0 + 101.85 0.0 0.0 10.24 10.24 85.353 0.0 0.0 0.0 36.47817481888637 1.3621974701798931 1.3621974701798931 1.3621974701798931 0 1.6989700043360187 2.0 0.5 0.7059771852360797 + + TAE{I|L}G{I|L}RHV;TAE{I|L}G{I|L}RVH;TAE{I|L}VARHV;TAE{I|L}VARVH;TAV{[CP]|[EA]}{I|L}RHV;TAV{[CP]|[EA]}{I|L}RVH;TAV{[QN]|[E{I|L}]|[KN]}ARHV;TAV{[QN]|[E{I|L}]|[KN]}ARVH;TA[W{I|L}]{I|L}[VG]HV;TA[W{I|L}]{I|L}[VG]VH 10.24;10.103;9.2348;9.0978;6.7737;6.6367;5.7682;5.6312;5.0083;4.8713 +;-;-;-;-;-;-;-;-;- + 315 + 1 1.474 74922.7 1.0 3409 5213 8615 HBL1_DMSO_200M_050219_1,8624 HBL1_DMSO_200M_050219_1,8624,TAELGIRHV True True TAELGIRHV 45.42469 498.285144031048 13940470.5 8615.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 5.822110652923584 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8625 45.426 61.0 1632600.0 25 0 439760.0 31457 RPRGPEGVGSL 11 95 562.8119900464812 1123.6094271597624 2 562.8124267458916 MULTI CID FTMS 0 0 0 8615 1304969.5 0.8395998650174953 -1 0.1328239440917968 10 Unmodified _RPRGPEGVGSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 23.015651743759182 0.551788120787869 3 RP 2 9 17.836 0.0 0.0 1.5874 0.0 0.0 0.0 867.4397677057249 867.4397677057249 4.340905095085201 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 + RP 1.5874 + + 102 + 1 1.474 81675.1 1.0 3410 5213 8615 HBL1_DMSO_200M_050219_1,8625 HBL1_DMSO_200M_050219_1,8625,RPRGPEGVGSL False True FAYTSRHEI 45.426211 562.812426745892 7419330.5 8615.0 nc|ENSG00000117682|Q86SQ9-2|DHDDS;;nc|ENSG00000117682|Q86SQ9-3|DHDDS;;ENSG00000117682|ENST00000236342|DHDDS 4.69827143351237 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8626 45.428 62.0 1727400.0 25 0 108210.0 + 36501 TAELGIRHV 9 121 332.5259065109494 994.5558901330484 3 332.5257446169853 MULTI CID FTMS 0 0 0 8615 1034732.75 0.6011732296685605 -1 0.1328239440917968 11 Unmodified _TAELGIRHV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 41.95555342248728 0.0647214845423414 3 TAE{I|L}G{I|L}RHV 9 0 + 76.085 0.0 0.0 7.6501 7.6501 85.438 0.0 0.0 0.0 47.96826857310498 9.921525057367404 9.921525057367404 3.0102999566398125 0 0.3182503180159344 2.0 0.0 0.9749073637206092 + + TAE{I|L}G{I|L}RHV;TAE{I|L}VARHV;TAEVA{I|L}RHV;TAEV{I|L}ARHV;[PG][KQ]{I|L}G{I|L}[WP];[PG][KQ]AV{I|L}[WP];[PG][KQ]{I|L}AV[WP];[PG][KQ]A{I|L}V[WP];T[W{I|L}]A{I|L}[VG]HV;T[W{I|L}]{I|L}A[VG]HV 7.6501;7.3474;6.8801;6.5774;3.7524;3.4497;2.9824;2.6797;2.2765;1.9739 +;-;-;-;-;-;-;-;-;- + 247 + 1 1.474 90268.2 1.0 3411 5213 8615 HBL1_DMSO_200M_050219_1,8626 HBL1_DMSO_200M_050219_1,8626,TAELGIRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8627 45.431 172.0 944760.0 25 0 180960.0 + 15364 IPNEKIRNI 9 103 548.8270044560766 1095.639455978953 2 548.8274413943291 MULTI CID FTMS 0 0 0 8615 963842.5 0.6838315261131616 -1 0.1328239440917968 12 Unmodified _IPNEKIRNI_ ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1 61.60191391372663 0.0251951588191061 3 {I|L}PNEK{I|L}{I|L}[RN] 9 2 + 94.14 0.0 0.0 8.5922 8.5922 84.373 0.0 0.0 0.0 33.46787486224656 1.4612803567823818 1.4612803567823818 1.4612803567823818 0 1.5356668758921828 1.6989700043360187 0.2887254899964357 0.7302046884880937 {I|L}PNEK{I|L}{I|L}[RN];{I|L}PNEK{I|L}RN{I|L};{I|L}PGGEK{I|L}{I|L}[RN];{I|L}PNEK{I|L}RGG{I|L};{I|L}PGGEK{I|L}RN{I|L};{I|L}PGGEK{I|L}RGG{I|L} 8.5922;8.4588;7.7518;7.6184;7.6184;6.7819 -;+;-;-;-;- + 263 + 1 1.474 132613.0 1.0 3412 5213 8615 HBL1_DMSO_200M_050219_1,8627 HBL1_DMSO_200M_050219_1,8627,IPNEKIRNI True True IPNEKIRNI 45.431102 548.827441394329 98977992.0 8615.0 ENSG00000168827|ENST00000486715|GFM1;;nc|ENSG00000168827|Q96RP9-2|GFM1 5.882470766703288 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8628 45.433 86.0 956810.0 25 0 149040.0 + -1 YLPCNPFC 8 129 535.7230055710037 1069.4314582088073 2 535.7231323122978 MULTI CID FTMS 0 0 0 8615 900750.375 0.3014187506143611 -1 0.1328239440917968 13 2 Carbamidomethyl (C) _YLPC(Carbamidomethyl (C))NPFC(Carbamidomethyl (C))_ REV__ENST00000602725.5_1_1:32373157-32373337:-|nuORF 20.871210003555333 0.6025813472596342 3 Y{I|L}Q 3 -1 45.336 0.0 0.0 4.2393 0.0 0.0 0.0 662.2058809869749 662.2058809869749 7.18765315847925 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.75 Y{I|L}Q 4.2393 - 366 + 1 1.474 67111.0 1.0 3413 5213 8615 HBL1_DMSO_200M_050219_1,8628 HBL1_DMSO_200M_050219_1,8628,YLPCNPFC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8629 45.44 408.0 349530.0 25 0 20420.0 12495 GVCIFVWI 8 157 468.7523884023757 935.4902238715514 2 468.7526122927666 MULTI CID FTMS 0 0 0 8615 606355.5625 0.670650350533534 -6 0.5443763732910156 14 Unmodified _GVCIFVWI_ ENSG00000169508|ENST00000376414|GPR183 17.086550045450526 0.6584923310065985 3 {NN|[MP]|[D{I|L}]|[EV]}PPPPQG 8 7 33.887 0.0 0.0 3.6224 0.0 0.0 0.0 131.08657331907014 131.08657331907014 19.907871390014016 0.0 0.0 0.0 0 0.0 0.721246399047171 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQG 3.6224 - 1599 1 1.474 109715.3 1.0 3414 5213 8615 HBL1_DMSO_200M_050219_1,8629 HBL1_DMSO_200M_050219_1,8629,GVCIFVWI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8630 45.444 169.0 1108500.0 25 0 73217.0 25036 MPTHQQSI 8 139 471.2302739017799 940.4459948703598 2 471.2295715212822 MULTI CID FTMS 0 0 0 8615 521390.4375 0.4423589239213963 -3 0.2736282348632812 15 Unmodified _MPTHQQSI_ ENST00000327906.7_1_3:52453897-52455742:+|nuORF 16.942295170755138 0.6606234159769251 3 MPPPYHS{I|L} 8 4 + 58.101 0.0 0.0 6.1781 6.1781 78.322 0.0 0.0 0.0 46.31852433686792 1.5589669245139817 1.5589669245139817 1.249387366082999 0 0.8494850021680094 2.0 0.0 0.0 MPPPYHS{I|L};MPPYPHS{I|L};MPPPYH{I|L}S;MPPYPH{I|L}S;MPPP[QT][RD];MPPP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[QP];MPV[HD][KQ]S;M[YK]YHS{I|L};M[YK]YH{I|L}S 6.1781;6.0452;5.5936;5.4607;5.1399;4.4997;3.2679;0.79285;0.20837 -;-;-;-;-;-;-;-;- 313 + 1 1.474 148477.3 1.0 3415 5213 8615 HBL1_DMSO_200M_050219_1,8630 HBL1_DMSO_200M_050219_1,8630,MPTHQQSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8631 45.445 67.0 692110.0 25 0 115010.0 + -1 VFCCVQCQ 8 66 493.70010709599313 0 493.6998474001884 PEAK CID FTMS 0 0 0 8615 529628.6875 0.5381012258259358 -1 0.1328239440917968 16 Carbamidomethyl (C) _VFCCVQC(Carbamidomethyl (C))Q_ REV__ENSG00000154229|ENST00000413366|PRKCA;REV__ENSG00000166501|ENST00000643927|PRKCB;REV__nc|ENSG00000166501|P05771|PRKCB 5.230669730166228 0.5807325378471833 3 G 1 -1 1.9897 0.0 0.0 0.20192 0.0 0.0 857.2903376277301 68.05140863590077 925.3417462636309 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20192 - 2 + 1 1.474 38925.5 1.0 3416 5213 8615 HBL1_DMSO_200M_050219_1,8631 HBL1_DMSO_200M_050219_1,8631,VFCCVQCQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8632 45.449 229.0 777950.0 25 0 88590.0 + 31433 RPPPPNSVI 9 144 488.7823434083903 975.5501338835808 2 488.7824890017509 MULTI CID FTMS 0 0 0 8615 441659.1875 0.4071662512156135 -2 0.1599006652832031 17 Unmodified _RPPPPNSVI_ ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1 43.77239144664712 0.0547478964384323 3 [RP][YK]NSV{I|L} 8 3 + 56.885 0.0 0.0 5.8311 5.8311 87.815 0.0 0.0 0.0 6.936974992327123 35.768429275858466 6.936974992327123 9.262137858390815 0 1.1237125054200234 0.0 0.8494850021680094 0.1747425010840047 [RP][YK]NSV{I|L};[RP][YK]GGSV{I|L};{[HG]|PP}NP[RP]SV{I|L};{[HG]|PP}NPS[RP]V{I|L};[NP]PP[RP]SV{I|L};{[HG]|PP}GGP[RP]SV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}V][{I|L}A]SV{I|L};[NP]PPS[RP]V{I|L};{[HG]|PP}GGPS[RP]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}][Y{I|L}]V{I|L} 5.8311;4.8817;4.8052;4.4429;4.0842;3.8613;3.8512;3.7219;3.499;3.0067 -;-;-;-;-;-;-;-;-;- 1175 1 1.474 138573.7 1.0 3417 5213 8615 HBL1_DMSO_200M_050219_1,8632 HBL1_DMSO_200M_050219_1,8632,RPPPPNSVI True True RPPPPNSVI 45.449498 488.782489001751 28450092.0 8615.0 ENST00000453595.1_1_X:36980271-36981156:-|nuORF;;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;;nc|ENSG00000198176|Q14186-2|TFDP1;;ENSG00000198176|ENST00000375370|TFDP1 6.489714463551839 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8633 45.452 95.0 1300100.0 25 0 158610.0 26317 NRNIMDFKL 9 174 384.20737942677295 1149.600308880519 3 384.2072326540947 MULTI CID FTMS 0 0 0 8615 437033.4375 0.5373406668984821 -1 0.1328239440917968 18 Unmodified _NRNIMDFKL_ ENSG00000189362|ENST00000409150|NEMP2;ENST00000343105.9_1_2:191381046-191390059:-|nuORF;nc|ENSG00000189362|A6NFY4-2|NEMP2 12.240655878213236 0.5053430591993562 3 VHTN{I|L} 5 8 24.641 0.0 0.0 2.1435 0.0 0.0 567.3130360334 0.0 567.3130360334 0.0 3.672137691284405 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 VHTN{I|L} 2.1435 - 317 1 1.474 100641.4 1.0 3418 5213 8615 HBL1_DMSO_200M_050219_1,8633 HBL1_DMSO_200M_050219_1,8633,NRNIMDFKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8634 45.456 232.0 685810.0 25 0 84658.0 -1 0 183 432.2802568558226 431.27298038922265 1 432.2803832888603 MULTI CID FTMS 0 0 0 8615 431460.34375 0.0046475682393587 27 -2.219451904296875 19 3 {I|L} 1 -1 10.596 0.0 0.0 2.4569 0.0 0.0 300.1779314163695 0.0 300.1779314163695 0.0 1.1299253028247982 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.4569 - 30 + 1 1.474 123135.2 1.0 3419 5213 8615 HBL1_DMSO_200M_050219_1,8634 HBL1_DMSO_200M_050219_1,8634, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8635 45.458 125.0 2401600.0 25 0 488890.0 + 10720 FYDDKKYTY 9 132 414.8607897265231 1241.5605397797692 3 414.8608581423759 MULTI CID FTMS 0 0 0 8615 399827.9375 0.1339570615197871 -2 0.1599006652832031 20 Unmodified _FYDDKKYTY_ ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 88.95385435242217 0.0153473310052057 3 {M(Oxidation (M))|F}YDDKSKD[QP] 10 4 + 92.476 0.0 0.0 7.4483 7.4483 81.302 0.0 0.0 0.0 38.040886097682346 0.1227968600336737 0.1227968600336737 0.7918124604762511 0 0.5866968715561641 1.5228787452803376 1.9991348669726232 0.3252574989159953 {M(Oxidation (M))|F}YDDKSKD[QP];{M(Oxidation (M))|F}YDDKSDK[QP];{M(Oxidation (M))|F}YDDKSAAT[QP];{M(Oxidation (M))|F}YDDK[YK]TY;{M(Oxidation (M))|F}YDDK[QT]T[QP];{[YD]|[{M(Oxidation (M))|F}M]}DKKTYY{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}DKKYTY{M(Oxidation (M))|F};[QP][YK]GKDDYE;{[YD]|[{M(Oxidation (M))|F}M]}KKDTYY{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}KKDYTY{M(Oxidation (M))|F} 7.4483;7.3846;6.4677;6.3752;5.6921;4.823;4.7978;4.5456;4.3021;4.2769 -;-;-;+;-;-;-;-;-;- + 2819 + 1 1.474 237316.5 1.0 3420 5213 8615 HBL1_DMSO_200M_050219_1,8635 HBL1_DMSO_200M_050219_1,8635,FYDDKKYTY True True FYDDKKYTY 45.458473 414.860858142376 28306251.0 8615.0 ENSG00000115368|ENST00000314761|WDR75;;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 7.132794539133708 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8637 45.466 329.0 390580.0 25 0 31122.0 -1 LNSAVSCGY 9 147 485.71673803052624 969.4189231278524 2 485.7171813845634 MULTI CID FTMS 0 0 0 8636 244305.890625 0.6875195728082082 1 -0.0692977905273437 1 Carbamidomethyl (C) _LNSAVSC(Carbamidomethyl (C))GY_ ENST00000300403.10_1_20:30388876-30389098:+|nuORF 13.90604991867851 0.4602628045680013 3 {[QS]|[NT]}AVV 5 -1 27.932 0.0 0.0 2.8813 0.0 0.0 0.0 482.13605676822505 482.13605676822505 9.990632312882592 0.0 0.0 0.0 0 1.2614393726401687 0.0 0.0 0.0 {[QS]|[NT]}AVV 2.8813 - 549 + 1 1.474 99832.0 1.0 3421 5214 8636 HBL1_DMSO_200M_050219_1,8637 HBL1_DMSO_200M_050219_1,8637,LNSAVSCGY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8638 45.468 20.0 2345300.0 25 0 184840.0 + 24380 MFLSFPTTK 9 73 544.2785450029007 0 544.2784301638603 PEAK CID FTMS 0 0 0 8636 3042564.5 1.0 0 0.0 2 Oxidation (M) _M(Oxidation (M))FLSFPTTK_ CON__P01966;ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;ENST00000487791.1_1_16:226802-227261:+|nuORF 61.60191391372663 0.0152064990424181 3 {M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F}PTT 7 2 46.979 0.0 0.0 4.3237 0.0 0.0 147.0344937149826 143.08284937076408 290.1173430857467 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 1.41944517631652 0.0 + {M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F}PTT 4.3237 + + 83 + 1 1.474 43171.2 1.0 3422 5214 8636 HBL1_DMSO_200M_050219_1,8638 HBL1_DMSO_200M_050219_1,8638,MFLSFPTTK True False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8639 45.469 29.0 1784000.0 25 0 192270.0 + -1 DSTVMPCKV 9 71 518.7435828376164 1035.4726127420329 2 518.7439453005791 MULTI CID FTMS 0 0 0 8636 1529363.875 0.2209335631420257 -2 0.180328369140625 3 Carbamidomethyl (C) _DSTVMPC(Carbamidomethyl (C))KV_ REV__ENSG00000122482|ENST00000337393|ZNF644;REV__nc|ENSG00000122482|Q9H582-2|ZNF644 15.847184025352805 0.4077185912009129 3 {[DS]|[MA]|[CV]|TT}AP 4 -1 24.693 0.0 0.0 2.3847 0.0 0.0 0.0 662.3015230768186 662.3015230768186 4.273174902439578 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}AP 2.3847 - 69 + 1 1.474 45525.5 1.0 3423 5214 8636 HBL1_DMSO_200M_050219_1,8639 HBL1_DMSO_200M_050219_1,8639,DSTVMPCKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8640 45.47 42.0 1776100.0 25 0 219070.0 + 10721 FYDDKKYTY 9 71 621.7874050579532 1241.5602571827062 2 621.7877075076103 MULTI CID FTMS 0 0 0 8636 1486989.375 0.594018417498861 -1 0.0475044250488281 4 Unmodified _FYDDKKYTY_ ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 49.55428908609986 0.0413471690215031 3 {M(Oxidation (M))|F}YDDKSKD[QP] 10 4 + 73.88 0.0 0.0 5.9506 5.9506 75.912 0.0 0.0 0.0 45.85470640367888 3.177418734074564 3.177418734074564 0.2422750325201406 0 0.3807196863200844 1.6989700043360187 0.75 0.0 {M(Oxidation (M))|F}YDDKSKD[QP];{M(Oxidation (M))|F}YDDKSDK[QP];Y{M(Oxidation (M))|F}DDKSKD[QP];Y{M(Oxidation (M))|F}DDKSDK[QP];{M(Oxidation (M))|F}YDDK[YK]TY;Y{M(Oxidation (M))|F}DDK[YK]TY;{M(Oxidation (M))|F}YD[KG]TTAD[QP];{M(Oxidation (M))|F}Y[QA]TTTAD[QP];Y{M(Oxidation (M))|F}D[KG]TTAD[QP];{M(Oxidation (M))|F}YDDP[VP][TA]{[MS]|[{M(Oxidation (M))|F}A]} 5.9506;5.9311;5.7081;5.6886;5.009;4.7665;3.9585;3.7161;3.7161;3.5821 -;-;-;-;+;-;-;-;-;- + 583 + 1 1.474 59321.1 1.0 3424 5214 8636 HBL1_DMSO_200M_050219_1,8640 HBL1_DMSO_200M_050219_1,8640,FYDDKKYTY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8641 45.471 51.0 1260000.0 25 0 168900.0 + -1 DAYDASCMK 9 110 530.7070142950334 1059.3994756568668 2 530.7074462771416 MULTI CID FTMS 0 0 0 8636 1245888.5 0.1960330592296249 -2 0.180328369140625 5 Carbamidomethyl (C) _DAYDASC(Carbamidomethyl (C))MK_ REV__ENSG00000042832|ENST00000220616|TG;REV__nc|ENSG00000042832|P01266-2|TG 10.073929032068715 0.563993802247229 3 {[DA]|[EG]}YDEY 6 -1 31.08 0.0 0.0 2.9338 0.0 0.0 0.0 300.1211913153231 300.1211913153231 11.38743756437102 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {[DA]|[EG]}YDEY 2.9338 - 167 1 1.474 55999.1 1.0 3425 5214 8636 HBL1_DMSO_200M_050219_1,8641 HBL1_DMSO_200M_050219_1,8641,DAYDASCMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8642 45.473 54.0 1227800.0 25 0 113420.0 + -1 EGSVCVCLAV 10 98 346.1648519972555 1035.4727265919664 3 346.1647827029228 MULTI CID FTMS 0 0 0 8636 1145765.375 0.2170569677145946 -2 0.180328369140625 6 Carbamidomethyl (C) _EGSVC(Carbamidomethyl (C))VCLAV_ REV__ENST00000423656.5_1_3:51533973-51534006:-|nuORF 13.614867670302877 0.6190977555336379 3 VVKV 4 -1 20.768 0.0 0.0 2.0056 0.0 0.0 592.1597821113008 0.0 592.1597821113008 0.0 -1.9887779833418264 -1.9887779833418264 0.0 0 0.0 0.0 0.0 0.2887254899964357 VVKV 2.0056 - 79 + 1 1.474 62045.9 1.0 3426 5214 8636 HBL1_DMSO_200M_050219_1,8642 HBL1_DMSO_200M_050219_1,8642,EGSVCVCLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8643 45.474 77.0 795280.0 25 0 41127.0 6724 EDKRQDMANAF 11 65 662.799475651445 1323.58439836969 2 662.8000976443291 MULTI CID FTMS 0 0 0 8636 813116.125 0.7639397029492857 -1 0.0475044250488281 7 Unmodified _EDKRQDMANAF_ ENSG00000062598|ENST00000290246|ELMO2;ENST00000480042.5_1_20:45008831-45014791:-|nuORF;nc|ENSG00000062598|Q96JJ3-3|ELMO2 20.41453444215458 0.6105011870913812 3 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F} 12 8 + 97.194 0.0 0.0 7.3433 7.3433 90.9 0.0 0.0 0.0 15.335451908949665 13.116964412786103 13.116964412786103 9.098233696509126 0 0.7134679910804405 1.2218487496163564 0.0 1.6237125054200234 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]A[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F} 7.3433;6.6559;6.6559;6.6559;6.1846;5.9206;5.495;5.495;5.495;5.2309 -;-;-;-;-;-;-;-;-;- 939 1 1.474 52529.1 1.0 3427 5214 8636 HBL1_DMSO_200M_050219_1,8643 HBL1_DMSO_200M_050219_1,8643,EDKRQDMANAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8644 45.477 140.0 1956600.0 25 0 137070.0 -1 0 136 1037.9749124221066 2073.9352719110134 2 1037.975268542767 MULTI CID FTMS 0 0 0 8636 736660.5 0.2129064282865417 3 -0.2884483337402344 8 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES{M(Oxidation (M))|F}GD{I|L}STPDAV{M(Oxidation (M))|F}GN[KP] 19 -1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}E + + 97.022 7.4473 1.7598 4.6782 4.6782 54.595 0.0 0.0 0.0 0.0 31.825953861611808 0.0 0.0 0 2.3243923658886185 0.0 1.079689690656103 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES{M(Oxidation (M))|F}GD{I|L}STPDAV{M(Oxidation (M))|F}GN[KP] 4.6782 - 213423 + 1 1.474 177295.5 1.0 3428 5214 8636 HBL1_DMSO_200M_050219_1,8644 HBL1_DMSO_200M_050219_1,8644, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8645 45.48 122.0 684580.0 25 0 52037.0 + -1 VTCCYQLA 8 107 479.21349621437656 956.4124394955531 2 479.2130004763603 MULTI CID FTMS 0 0 0 8636 763253.5625 1.0 0 0.0 9 Carbamidomethyl (C) _VTC(Carbamidomethyl (C))CYQLA_ REV__ENSG00000176018|ENST00000315948|LYSMD3;REV__nc|ENSG00000176018|Q7Z3D4-2|LYSMD3 12.531546534597751 0.7257836412119636 3 [EP]S 3 -1 22.676 0.0 0.0 2.371 0.0 0.0 0.0 640.2621763942437 640.2621763942437 4.025815423834654 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [EP]S 2.371 - 324 1 1.474 70397.9 1.0 3429 5214 8636 HBL1_DMSO_200M_050219_1,8645 HBL1_DMSO_200M_050219_1,8645,VTCCYQLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8646 45.482 76.0 1098700.0 25 0 88335.0 + 6137 DSYRKQVVI 9 106 554.3110643319119 1106.6075757306237 2 554.3111450076103 MULTI CID FTMS 0 0 0 8636 674272.6875 0.2435560286441871 -2 0.180328369140625 10 Unmodified _DSYRKQVVI_ ENSG00000133703|ENST00000311936|KRAS;ENSG00000174775|ENST00000311189|HRAS;ENSG00000213281|ENST00000369535|NRAS;nc|ENSG00000133703|P01116|KRAS;nc|ENSG00000174775|P01112-2|HRAS 49.55428908609986 0.0413471690215031 3 {[DS]|[MA]|[CV]|TT}[YR]KQVV{I|L} 9 0 + 50.952 0.0 0.0 4.6044 4.6044 83.043 0.0 0.0 0.0 4.766668591815417 27.47933455448525 4.766668591815417 9.208187539523747 0 0.7742275032520141 0.0 0.6861818737241735 0.3494850021680094 + + {[DS]|[MA]|[CV]|TT}[YR]KQVV{I|L};{[DS]|[MA]|[CV]|TT}[YR]K[AG]VV{I|L} 4.6044;3.7723 +;- + 265 1 1.474 70755.6 1.0 3430 5214 8636 HBL1_DMSO_200M_050219_1,8646 HBL1_DMSO_200M_050219_1,8646,DSYRKQVVI True True DSYRKQVVI 45.48161 554.31114500761 30862938.0 8636.0 nc|ENSG00000174775|P01112-2|HRAS;;ENSG00000213281|ENST00000369535|NRAS;;ENSG00000133703|ENST00000311936|KRAS;;ENSG00000174775|ENST00000311189|HRAS;;nc|ENSG00000133703|P01116|KRAS 5.000370343526204 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8647 45.485 161.0 523010.0 25 0 52369.0 + 14257 IEEHETAE 8 109 319.8108007303741 956.4105727913224 3 319.8104736208916 MULTI CID FTMS 0 0 0 8636 570543.875 1.0 0 0.0 11 Unmodified _IEEHETAE_ REV__ENSG00000110318|ENST00000263468|CEP126 3.5964929083625545 0.8025018637788065 3 MPP 3 -1 21.427 0.0 0.0 2.2403 0.0 0.0 0.0 628.2450655572874 628.2450655572874 12.21848749616356 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MPP 2.2403 - 32 + 1 1.474 74313.1 1.0 3431 5214 8636 HBL1_DMSO_200M_050219_1,8647 HBL1_DMSO_200M_050219_1,8647,IEEHETAE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8648 45.488 146.0 586190.0 25 0 21885.0 -1 0 88 559.0577376653367 2232.2018447949467 4 559.3092529177666 MULTI CID FTMS 0 0 0 8636 474004.125 0.6948854530148274 -1 0.0475044250488281 12 3 {M(Oxidation (M))|F}{I|L}R{I|L}Q 5 -1 46.982 0.0 0.0 2.1047 0.0 0.0 0.0 1571.773000130899 1571.773000130899 10.33378525900595 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.3494850021680094 {M(Oxidation (M))|F}{I|L}R{I|L}Q 2.1047 - 476 + 1 1.474 73993.1 1.0 3432 5214 8636 HBL1_DMSO_200M_050219_1,8648 HBL1_DMSO_200M_050219_1,8648, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8649 45.49 94.0 526420.0 25 0 67417.0 + 40578 VKNSFLNESI 10 71 575.807292798335 0 575.8071777224541 PEAK CID FTMS 0 0 0 8636 463126.5625 1.0 0 0.0 13 Unmodified _VKNSFLNESI_ REV__ENSG00000120254|ENST00000367321|MTHFD1L;REV__nc|ENSG00000120254|Q6UB35-2|MTHFD1L 16.149105407346934 0.3281668441439271 3 VA 2 -1 19.776 0.0 0.0 1.7203 0.0 0.0 128.09635510958225 848.3764742486936 976.472829358276 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 VA 1.7203 - 10 + 1 1.474 42473.9 1.0 3433 5214 8636 HBL1_DMSO_200M_050219_1,8649 HBL1_DMSO_200M_050219_1,8649,VKNSFLNESI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8650 45.492 123.0 500040.0 25 0 35344.0 -1 PEEICRCLG 9 112 538.7465285291937 1075.478504125187 2 538.7477294802666 MULTI CID FTMS 0 0 0 8636 444627.59375 0.8774479192555279 -2 0.180328369140625 14 Carbamidomethyl (C) _PEEIC(Carbamidomethyl (C))RCLG_ ENSG00000156958|ENST00000560031|GALK2;ENST00000560119.5_1_15:49527865-49611209:+|nuORF;ENST00000561014.1_1_15:49531438-49610381:+|nuORF;nc|ENSG00000156958|Q01415-2|GALK2 25.399314129420983 0.2080152500878129 3 [EP]TVS 5 -1 35.802 0.0 0.0 3.3289 0.0 0.0 0.0 559.2116182916624 559.2116182916624 21.255991573188247 0.0 0.0 0.0 0 0.2614393726401688 1.3979400086720375 0.0 0.0 [EP]TVS 3.3289 - 220 + 1 1.474 56840.1 1.0 3434 5214 8636 HBL1_DMSO_200M_050219_1,8650 HBL1_DMSO_200M_050219_1,8650,PEEICRCLG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8651 45.495 144.0 489080.0 25 0 36608.0 + 27612 PLEPTQSV 8 120 435.73190224853386 869.4492515638677 2 435.7322265505791 MULTI CID FTMS 0 0 0 8636 397277.375 0.7566247718735909 -10 0.8207015991210938 15 Unmodified _PLEPTQSV_ REV__ENST00000446108.5_1_10:6131477-6131663:+|nuORF 10.183394434864962 0.7604730176254005 3 V 1 -1 13.979 0.0 0.0 1.6078 0.0 0.0 752.3697436676748 0.0 752.3697436676748 0.0 2.420007495471612 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.6078 + + 109 + 1 1.474 56530.4 1.0 3435 5214 8636 HBL1_DMSO_200M_050219_1,8651 HBL1_DMSO_200M_050219_1,8651,PLEPTQSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8652 45.497 105.0 647370.0 25 0 66623.0 + 36936 TEVLSHFSNF 10 100 394.19325766934304 1179.5579436082292 3 394.1938964724541 MULTI CID FTMS 0 0 0 8636 394142.6875 1.0 0 0.0 16 Unmodified _TEVLSHFSNF_ REV__nc|ENSG00000265992|Q1W209|ESRG 12.174745833636583 0.6432616012102976 3 {[ET]|[MV]}SYSYKR{M(Oxidation (M))|F} 9 -1 {[ET]|[MV]} + + 41.771 1.338 0.58153 3.5412 3.5412 51.351 0.0 0.0 0.0 0.0 31.93774796429757 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {[ET]|[MV]}SYSYKR{M(Oxidation (M))|F} 3.5412 - 148 + 1 1.474 58403.3 1.0 3436 5214 8636 HBL1_DMSO_200M_050219_1,8652 HBL1_DMSO_200M_050219_1,8652,TEVLSHFSNF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8653 45.502 239.0 372080.0 25 0 22485.0 39414 VALGAAEK 8 130 379.724254500749 757.433956068298 2 379.7236205935478 MULTI CID FTMS 0 0 0 8636 301939.96875 1.0 0 0.0 17 Unmodified _VALGAAEK_ ENSG00000145901|ENST00000521591|TNIP1;nc|ENSG00000145901|Q15025-2|TNIP1;nc|ENSG00000145901|Q15025-3|TNIP1;nc|ENSG00000145901|Q15025-4|TNIP1;nc|ENSG00000145901|Q15025-5|TNIP1;nc|ENSG00000145901|Q15025-6|TNIP1;nc|ENSG00000145901|Q15025-7|TNIP1;nc|ENSG00000145901|Q15025-8|TNIP1 24.67388899826682 0.525179942228231 3 GE[KP]EK 6 6 27.07 0.0 0.0 3.5739 0.0 0.0 71.07432753730625 0.0 71.07432753730625 0.0 16.100840614449794 0.0 0.0 0 0.3807196863200844 0.0 0.3252574989159953 0.0 GE[KP]EK 3.5739 - 124 1 1.474 75206.2 1.0 3437 5214 8636 HBL1_DMSO_200M_050219_1,8653 HBL1_DMSO_200M_050219_1,8653,VALGAAEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8654 45.505 179.0 664910.0 25 0 65140.0 + + 36230 FVHPGAATV 9 125 449.7376868547278 897.4608207762557 2 449.7414123415947 MULTI CID FTMS 0 0 0 8636 348408.09375 0.2295255596531899 -2 0.180328369140625 18 Unmodified _SVYVKCLS_ ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 25.399314129420983 0.5099049743284904 3 [VS]VY[KC]TV 8 -1 + 50.952 0.0 0.0 5.6774 5.6774 83.998 0.0 0.0 0.0 13.921039185145112 6.690067809585756 6.690067809585756 6.690067809585756 0 0.9247425010840048 2.0 1.1861818737241734 0.0 [VS]VY[KC]TV;[VS]VY[KC]S{I|L};[R{M(Oxidation (M))|F}]SVG{M(Oxidation (M))|F}SV;[VS][RH]DV[VS];[R{M(Oxidation (M))|F}]SR{M(Oxidation (M))|F}SV;[R{M(Oxidation (M))|F}]DK{M(Oxidation (M))|F}SV;[{M(Oxidation (M))|F}V][TA]K{M(Oxidation (M))|F}SV;{[MS]|[{M(Oxidation (M))|F}A]}[TA]VG{M(Oxidation (M))|F}SV;[VS]VY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GV;{[HG]|PP}VDVSV[VS] 5.6774;4.9319;4.1262;3.9726;3.9436;3.0766;3.0282;2.67;2.5961;2.5147 -;-;-;-;-;-;-;-;-;- 646 + 1 1.474 97028.6 1.0 3438 5214 8636 HBL1_DMSO_200M_050219_1,8654 HBL1_DMSO_200M_050219_1,8654,SVYVKCLS False False FVHPGAATV 45.505321 449.741412341595 1233088.5 8636.0 ENSG00000183283|ENST00000412716|DAZAP2;;nc|ENSG00000183283|Q15038-2|DAZAP2;;nc|ENSG00000183283|Q15038-5|DAZAP2;;nc|ENSG00000183283|Q15038-6|DAZAP2 4.909403483072917 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8655 45.516 625.0 133000.0 25 0 5999.1 -1 0 120 611.9687079856101 1832.88429455703 3 612.3034545779228 MULTI CID FTMS 0 0 0 8636 296578.6875 1.0 0 0.0 19 3 YWNAQRH 7 -1 38.893 0.0 0.0 2.1219 0.0 0.0 859.4315152378864 0.0 859.4315152378864 0.0 25.41283935573411 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 YWNAQRH 2.1219 - 1496 + 1 1.474 67744.2 1.0 3439 5214 8636 HBL1_DMSO_200M_050219_1,8655 HBL1_DMSO_200M_050219_1,8655, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8656 45.528 660.0 230810.0 25 0 12629.0 + 14699 IIVEPYLHFR 10 134 643.865050015462 1285.715547097724 2 643.8618652224541 MULTI CID FTMS 0 0 0 8636 276329.375 0.718658250594206 2 -0.1697502136230468 20 Unmodified _IIVEPYLHFR_ REV__ENSG00000177990|ENST00000324472|DPY19L2;REV__ENST00000306389.7_1_12:64015105-64059617:-|nuORF;REV__nc|ENSG00000189212|Q6NXN4|DPY19L2P1 17.11289562659939 0.5604042439455784 3 {I|L}{I|L}VVY 5 -1 53.015 0.0 0.0 4.1234 0.0 0.0 0.0 695.3277108485618 695.3277108485618 25.268024924119672 0.0 0.0 0.0 0 1.3807196863200843 1.6989700043360187 0.0 0.0 {I|L}{I|L}VVY 4.1234 - 1173 + 1 1.474 113378.9 1.0 3440 5214 8636 HBL1_DMSO_200M_050219_1,8656 HBL1_DMSO_200M_050219_1,8656,IIVEPYLHFR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8658 45.533 93.0 646140.0 25 0 58925.0 + 44776 YPLSKAQTV 9 99 503.78250582572656 1005.5504587182533 2 503.7823974490166 MULTI CID FTMS 0 0 0 8657 521512.75 0.0522362581684141 8 -0.6747398376464844 1 Unmodified _YPLSKAQTV_ ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3 41.8396318013385 0.0653578398400075 3 YP{I|L}E 4 6 66.133 0.0 0.0 6.5768 0.0 0.0 0.0 500.2708529108032 500.2708529108032 51.396044797224775 0.0 0.0 0.0 0 0.6694451763165201 2.0 0.75 0.0 YP{I|L}E 6.5768 - 146 + 1 1.474 49991.8 1.0 3441 5215 8657 HBL1_DMSO_200M_050219_1,8658 HBL1_DMSO_200M_050219_1,8658,YPLSKAQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8659 45.539 297.0 549590.0 25 0 38895.0 + 9156 FGADSTFIKK 10 142 557.302818269651 0 557.3027221560478 PEAK CID FTMS 0 0 0 8657 254427.828125 0.0058123796387608 4 -0.364410400390625 2 Unmodified _FGADSTFIKK_ REV__CON__A2I7N3 15.847184025352805 0.3304572136216667 3 G{I|L}AH{I|L}D 6 -1 25.75 0.0 0.0 2.3145 0.0 0.0 133.04528486772682 370.2101839654906 503.2554688332175 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L}AH{I|L}D 2.3145 - 801 + 1 1.474 123668.3 1.0 3442 5215 8657 HBL1_DMSO_200M_050219_1,8659 HBL1_DMSO_200M_050219_1,8659,FGADSTFIKK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8660 45.54 52.0 1256600.0 25 0 93321.0 + 4352 DASPVTNNTI 10 123 516.2538010195825 1030.493049105965 2 516.2538940310478 MULTI CID FTMS 0 0 0 8657 1218916.875 0.2925108574164298 -1 0.0692977905273437 3 Unmodified _DASPVTNNTI_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 58.6788170122104 0.0400518768368984 3 {[DA]|[EG]}SP[KQ]{I|L} 7 5 42.566 0.0 0.0 4.1307 0.0 0.0 0.0 288.0839053894212 288.0839053894212 14.347878861661414 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 1.0114393726401687 0.0 {[DA]|[EG]}SP[KQ]{I|L} 4.1307 - 932 1 1.474 53786.8 1.0 3443 5215 8657 HBL1_DMSO_200M_050219_1,8660 HBL1_DMSO_200M_050219_1,8660,DASPVTNNTI True True DASPVTNNTI 45.539893 516.253894031048 64782352.0 8657.0 nc|ENSG00000122779|O15164-2|TRIM24;;ENSG00000122779|ENST00000343526|TRIM24 3.007107973098755 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8661 45.542 118.0 781690.0 25 0 105150.0 + 43834 YFHDGVRVAA 10 103 378.8613389518271 1133.5621874556812 3 378.8607971072197 MULTI CID FTMS 0 0 0 8657 579132.6875 0.7608132826744276 -1 0.0692977905273437 4 Unmodified _YFHDGVRVAA_ ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5 23.78978130925829 0.4341852049148378 3 Y{M(Oxidation (M))|F}HDRRVAA 9 2 + 41.379 0.0 0.0 3.6504 3.6504 80.298 0.0 0.0 0.0 10.186011479343186 2.1834298792049367 2.1834298792049367 9.208187539523747 0 0.6677353201839438 0.0 0.0 0.0 Y{M(Oxidation (M))|F}HDRRVAA;Y{M(Oxidation (M))|F}HD[VG]RVAA;{[{M(Oxidation (M))|F}H]|[RQ]}DRRYQ{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[TP][QT]YQ{I|L};[HD]RR{M(Oxidation (M))|F}YQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y{M(Oxidation (M))|F}{[RE]|[WV]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HD]{M(Oxidation (M))|F}RRYQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YRR[Y{M(Oxidation (M))|F}]A 3.6504;2.8381;2.5437;1.6303;0.61904;0.47736;0.13908;0.048555 -;+;-;-;-;-;-;- + 174 + 1 1.474 76951.7 1.0 3444 5215 8657 HBL1_DMSO_200M_050219_1,8661 HBL1_DMSO_200M_050219_1,8661,YFHDGVRVAA False True YFHDGVRVAA 45.542337 378.86079710722 5104788.75 8657.0 ENSG00000065150|ENST00000651721|IPO5;;nc|ENSG00000065150|O00410-3|IPO5;;nc|ENSG00000065150|O00410-2|IPO5 7.067967573801677 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8662 45.55 444.0 341770.0 25 0 27812.0 + 35794 SVISEQSEQSV 11 164 596.7881113667535 1191.5616698003068 2 596.7878906130791 MULTI CID FTMS 0 0 0 8657 411606.1875 0.4596649638881979 -1 0.0692977905273437 5 Unmodified _SVISEQSEQSV_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON 65.47368725323818 0.0469305343733202 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSPC(Carbamidomethyl (C))SV{I|L}W 10 9 + 71.485 0.0 0.0 5.9993 5.9993 83.342 0.0 0.0 0.0 6.037698474605392 7.781264307194654 6.037698474605392 4.783474859079391 0 0.3807196863200844 0.0 1.8921590589602533 0.6694451763165201 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSPC(Carbamidomethyl (C))SV{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSEQSV{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSPC(Carbamidomethyl (C)){I|L}WW;{[ES]|[DT]|[{I|L}C]}QSEQSV{I|L}W;[AG]ESSEQSV{I|L}[VS];{[QS]|[NT]}ESEQSV{I|L}[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSP[CG]SV{I|L}W;{[ES]|[DT]|[{I|L}C]}QSPC(Carbamidomethyl (C))SV{I|L}[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSE{I|L}QWW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSEQ{I|L}WW 5.9993;5.5978;5.494;5.4925;5.3462;5.2929;5.2301;5.1249;5.0937;5.0925 -;-;-;-;-;-;-;-;-;- 10619 1 1.474 113627.1 1.0 3445 5215 8657 HBL1_DMSO_200M_050219_1,8662 HBL1_DMSO_200M_050219_1,8662,SVISEQSEQSV True True SVISEQSEQSV 45.550231 596.787890613079 4139100.75 8657.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-8|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-9|SON 5.86121145884196 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8663 45.554 216.0 647910.0 25 0 43718.0 6702 ECLFLAVM 8 158 463.2311693116779 924.4477856901558 2 463.2323486208916 MULTI CID FTMS 0 0 0 8657 423395.71875 0.0165714231548253 8 -0.6747398376464844 6 Unmodified _ECLFLAVM_ ENSG00000176198|ENST00000641082|OR11H4;nc|ENSG00000176198|Q8NGC9|OR11H4 19.438996006549623 0.6237395211498085 3 [NP][HN][{I|L}T]VM 8 5 + 32.074 0.0 0.0 3.4695 3.4695 81.221 0.0 0.0 0.0 5.792104754538045 13.139240735661897 5.792104754538045 11.229378315653577 0 1.113982988912431 1.0969100130080565 0.0 0.2059771852360797 [NP][HN][{I|L}T]VM;[{M(Oxidation (M))|F}E]W[{I|L}T]VM;[YR]AA{[QS]|[NT]}VM;[NP]{I|L}EEV[QP];[{M(Oxidation (M))|F}T]{[NV]|[RG]}{[QS]|[NT]}VM;[{I|L}P]NEEV[QP];[{M(Oxidation (M))|F}T]{[QS]|[NT]}{[NV]|[RG]}VM;[KS][C(Carbamidomethyl (C))S][{I|L}T]VM;[{M(Oxidation (M))|F}E]W[{I|L}T]MV;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}D]|MM}[{I|L}T]VM 3.4695;2.2548;1.654;1.516;1.4574;1.2379;1.0703;0.97839;0.86604;0.85513 -;-;-;-;-;-;-;-;-;- 498 1 1.474 108409.8 1.0 3446 5215 8657 HBL1_DMSO_200M_050219_1,8663 HBL1_DMSO_200M_050219_1,8663,ECLFLAVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8664 45.558 202.0 494630.0 25 0 41404.0 + 36632 TASRPAPLV 9 127 456.26847742074193 910.522401908284 2 456.2687866091728 MULTI CID FTMS 0 0 0 8657 358327.84375 1.0 0 0.0 7 Unmodified _TASRPAPLV_ ENSG00000133422|ENST00000397641|MORC2;nc|ENSG00000133422|Q9Y6X9-2|MORC2 41.95555342248728 0.0647214845423414 3 [TA][WP]KP{I|L}V 8 3 + 60.539 0.0 0.0 6.6488 6.6488 88.384 0.0 0.0 0.0 8.309932190414244 14.904630595263413 8.309932190414244 8.309932190414244 0 1.1861818737241734 1.6989700043360187 0.7742275032520141 0.0 [TA][WP]KP{I|L}V;[{I|L}P][MN]KP{I|L}V;[PA]{[WT]|[RM]}KP{I|L}V;[PS][RD]KP{I|L}V;[TP][WK]AP{I|L}V;[TA]{I|L}{I|L}P{[{M(Oxidation (M))|F}H]|[RQ]}{I|L} 6.6488;5.7361;5.0417;4.3408;3.6725;2.1658 -;-;-;-;-;- 135 1 1.474 81828.1 1.0 3447 5215 8657 HBL1_DMSO_200M_050219_1,8664 HBL1_DMSO_200M_050219_1,8664,TASRPAPLV True True TASRPAPLV 45.558147 456.268786609173 1462071.25 8657.0 ENSG00000133422|ENST00000397641|MORC2;;nc|ENSG00000133422|Q9Y6X9-2|MORC2 4.630885759989421 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8665 45.56 97.0 575310.0 25 0 41435.0 -1 IAHRCSQL 8 107 492.7556039558379 983.4966549784758 2 492.7547180056572 MULTI CID FTMS 0 0 0 8657 317627.28125 0.9313347165808644 1 -0.1004524230957031 8 Carbamidomethyl (C) _IAHRC(Carbamidomethyl (C))SQL_ ENSG00000179152|ENST00000342649|TCAIM;ENST00000431657.5_1_3:44409097-44442080:+|nuORF;nc|ENSG00000179152|Q8N3R3-4|TCAIM 10.183394434864962 0.7604730176254005 3 [{I|L}A]V 3 -1 25.062 0.0 0.0 2.5482 0.0 0.0 0.0 697.2833730783383 697.2833730783383 10.31878158598217 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]V 2.5482 - 390 1 1.474 47926.6 1.0 3448 5215 8657 HBL1_DMSO_200M_050219_1,8665 HBL1_DMSO_200M_050219_1,8665,IAHRCSQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8666 45.572 698.0 385440.0 25 0 20024.0 + 30675 RFPEHVREI 9 241 394.8840757334426 0 394.8837158083916 PEAK CID FTMS 0 0 0 8657 248462.671875 0.8534982368190821 1 -0.1004524230957031 9 Unmodified _RFPEHVREI_ ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR 50.13029200064056 0.0313121054309282 3 M 1 9 6.9897 0.0 0.0 0.8873 0.0 0.0 547.6533005373947 106.0416735284789 653.6949740658736 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.8873 - 127 + 1 1.474 210778.8 1.0 3449 5215 8657 HBL1_DMSO_200M_050219_1,8666 HBL1_DMSO_200M_050219_1,8666,RFPEHVREI True True RFPEHVREI 45.572362 394.883715808392 12210570.0 8657.0 nc|ENSG00000175054|Q13535-3|ATR;;nc|ENSG00000175054|Q13535-2|ATR;;ENSG00000175054|ENST00000350721|ATR 4.989506562550862 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8667 45.584 681.0 178530.0 25 0 17187.0 -1 PYRKMCEWRYE 11 100 809.3678539535412 1616.7211549738822 2 809.3679687380791 MULTI CID FTMS 0 0 0 8657 243900.375 1.0 0 0.0 10 Carbamidomethyl (C) _PYRKMC(Carbamidomethyl (C))EWRYE_ ENSG00000165899|ENST00000547103|OTOGL 0.3506318815782774 0.8734936314171269 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}V[C(Carbamidomethyl (C))S]QQNA{M(Oxidation (M))|F}YQ 13 -1 + 77.132 0.0 0.0 4.7709 4.7709 74.763 0.0 0.0 0.0 4.551213680327336 70.14230574259473 4.551213680327336 1.870866433571436 0 1.579689690656103 1.0 0.2887254899964357 0.8494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}V[C(Carbamidomethyl (C))S]QQNA{M(Oxidation (M))|F}YQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[WC(Carbamidomethyl (C))]QQNA{M(Oxidation (M))|F}YQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}V[C(Carbamidomethyl (C))S][AG]QNA{M(Oxidation (M))|F}YQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}V[C(Carbamidomethyl (C))S]Q[AG]NA{M(Oxidation (M))|F}YQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}V[C(Carbamidomethyl (C))S]QQGGA{M(Oxidation (M))|F}YQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[WC(Carbamidomethyl (C))]Q[AG]NA{M(Oxidation (M))|F}YQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[WC(Carbamidomethyl (C))]QQGGA{M(Oxidation (M))|F}YQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[WC(Carbamidomethyl (C))][AG]QNA{M(Oxidation (M))|F}YQ;{[MS]|[{M(Oxidation (M))|F}A]}N[C(Carbamidomethyl (C))R]AQQNA{M(Oxidation (M))|F}YQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[QT][MN]QNA{M(Oxidation (M))|F}YQ 4.7709;4.6552;4.2097;4.2097;4.2097;4.0924;4.0924;4.0924;3.8551;3.72 -;-;-;-;-;-;-;-;-;- 1928 1 1.474 87743.1 1.0 3450 5215 8657 HBL1_DMSO_200M_050219_1,8667 HBL1_DMSO_200M_050219_1,8667,PYRKMCEWRYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8668 45.596 682.0 108460.0 25 0 4761.8 -1 0 119 753.8765038617306 3011.4769095805223 4 754.1257812380791 MULTI CID FTMS 0 0 0 8657 206536.640625 0.0166724699676337 2 -0.2191505432128906 11 3 A{I|L}SA{I|L}SD{I|L}HA[HK] 12 -1 46.354 0.0 0.0 1.5392 0.0 0.0 1749.8026674924347 0.0 1749.8026674924347 0.0 34.671619863185725 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 A{I|L}SA{I|L}SD{I|L}HA[HK] 1.5392 - 1515 + 1 1.474 56604.4 1.0 3451 5215 8657 HBL1_DMSO_200M_050219_1,8668 HBL1_DMSO_200M_050219_1,8668, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8669 45.6 203.0 327130.0 25 0 23588.0 + 26758 PAATPPATPAA 11 115 482.759316397195 963.50407986119 2 482.7592956423759 MULTI CID FTMS 0 0 0 8657 220072.140625 0.9572520457783492 1 -0.1004524230957031 12 Unmodified _PAATPPATPAA_ REV__nc|ENSG00000154928|P54762-6|EPHB1 24.020572477871973 0.5281922720044371 3 {[SA]|[TG]}VTA 5 -1 19.641 0.0 0.0 2.0385 0.0 0.0 0.0 531.2571505182249 531.2571505182249 2.9857753328742795 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.0 {[SA]|[TG]}VTA 2.0385 - 195 + 1 1.474 58937.8 1.0 3452 5215 8657 HBL1_DMSO_200M_050219_1,8669 HBL1_DMSO_200M_050219_1,8669,PAATPPATPAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8670 45.614 745.0 274730.0 25 0 20226.0 + 43835 YFHDGVRVAA 10 165 567.7891730678803 1133.5637932025604 2 567.7875244021416 MULTI CID FTMS 0 0 0 8657 197668.140625 1.0 0 0.0 13 Unmodified _YFHDGVRVAA_ ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5 33.4449034751529 0.2267874087365337 3 Y{M(Oxidation (M))|F}HDR 5 5 45.01 0.0 0.0 3.9707 0.0 0.0 0.0 412.2331331842407 412.2331331842407 14.532548496285486 0.0 0.0 0.0 0 1.0941876774005248 0.0 0.0 0.0 Y{M(Oxidation (M))|F}HDR 3.9707 - 934 + 1 1.474 151700.4 1.0 3453 5215 8657 HBL1_DMSO_200M_050219_1,8670 HBL1_DMSO_200M_050219_1,8670,YFHDGVRVAA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8671 45.628 800.0 41160.0 25 0 11064.0 -1 0 25 1166.150439441204 0 1166.150439441204 PEAK CID FTMS 0 0 0 -1 0 14 3 E 1 -1 5.4846 0.0 0.0 0.23536 0.0 0.0 1674.0588897809164 524.1622408502561 2198.2211306311724 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.23536 - 1 + 1 1.474 37542.8 0.6499999761581421 3454 5215 8657 HBL1_DMSO_200M_050219_1,8671 HBL1_DMSO_200M_050219_1,8671, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8673 45.632 23.0 2188200.0 25 0 185320.0 + 27824 RPRGPEGVGSL 11 70 375.5436226376565 1123.6090385131697 3 375.5435668826103 MULTI CID FTMS 0 0 0 8672 1426479.0 0.3314923020149637 2 -0.1989250183105468 1 Unmodified _PLPWQQRSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 17.44264345198275 0.3645313841742926 3 GVGS{I|L} 5 7 40.406 0.0 0.0 3.5961 0.0 0.0 692.3733101258409 0.0 692.3733101258409 0.0 29.436974992327123 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 GVGS{I|L} 3.5961 - 71 1 1.474 46087.5 1.0 3455 5216 8672 HBL1_DMSO_200M_050219_1,8673 HBL1_DMSO_200M_050219_1,8673,PLPWQQRSL False False RPRGPEGVGSL 45.632428 375.54356688261 44267264.0 8672.0 ENST00000523767.5_1_5:149877380-149900454:+|nuORF 6.735316912333171 3.0 False 11.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8674 45.634 35.0 1196100.0 25 0 78768.0 + 34767 SQAPSTMQV 9 75 474.7261702176341 947.4377875020682 2 474.7264282107353 MULTI CID FTMS 0 0 0 8672 1091055.625 0.2610425882668056 3 -0.2639579772949219 2 Unmodified _SQAPSTMQV_ ENSG00000112658|ENST00000265354|SRF 24.020572477871973 0.2255576514309169 3 {[QS]|[NT]}A{I|L} 4 6 17.193 0.0 0.0 1.8147 0.0 0.0 0.0 545.2035400257588 545.2035400257588 -5.955612550363796 0.0 -5.955612550363796 0.0 0 0.0 0.0 0.0 0.25 {[QS]|[NT]}A{I|L} 1.8147 - 108 1 1.474 37511.4 1.0 3456 5216 8672 HBL1_DMSO_200M_050219_1,8674 HBL1_DMSO_200M_050219_1,8674,SQAPSTMQV False True SQAPSTMQV 45.633605 474.726428210735 25093120.0 8672.0 ENSG00000112658|ENST00000265354|SRF 6.351921399434407 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8675 45.635 21.0 2919200.0 25 0 288780.0 + 21088 LPAGPAPKV 9 73 425.2631289505345 848.511704967869 2 425.2632934451103 MULTI CID FTMS 0 0 0 8672 2834648.0 1.0 0 0.0 3 Unmodified _LPAGPAPKV_ ENSG00000254505|ENST00000347519|CHMP4A;nc|ENSG00000254505|Q9BY43-2|CHMP4A 34.10243960390752 0.1078313939113124 3 {I|L}PA[QP]PKV 8 2 + 54.03 0.0 0.0 6.3676 6.3676 93.195 0.0 0.0 0.0 38.34386162646428 7.365088997497722 7.365088997497722 54.0302239848744 0 0.8494850021680094 1.6989700043360187 0.0 0.0 {I|L}PA[QP]PKV 6.3676 - 156 + 1 1.474 52867.6 1.0 3457 5216 8672 HBL1_DMSO_200M_050219_1,8675 HBL1_DMSO_200M_050219_1,8675,LPAGPAPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8676 45.636 29.0 1915800.0 25 0 142220.0 + 5682 DPHSFPRTV 9 78 528.2671159154623 1054.5196788977246 2 528.2676269412041 MULTI CID FTMS 0 0 0 8672 1264203.625 0.7589956934382438 2 -0.1989250183105468 4 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 45.69961567697781 0.0497987121815769 3 DPHS{M(Oxidation (M))|F} 5 4 65.062 0.0 0.0 6.1699 0.0 0.0 0.0 468.25791345767817 468.25791345767817 43.9160538476542 0.0 0.0 0.0 0 0.3252574989159953 1.154901959985743 1.2302046884880935 0.0 + DPHS{M(Oxidation (M))|F} 6.1699 + + 168 + 1 1.474 48322.6 1.0 3458 5216 8672 HBL1_DMSO_200M_050219_1,8676 HBL1_DMSO_200M_050219_1,8676,DPHSFPRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8677 45.637 35.0 1503200.0 25 0 147870.0 + 37083 TGLTSASLL 9 79 431.7470562259805 861.4795595187611 2 431.7466308474541 MULTI CID FTMS 0 0 0 8672 1057043.5 1.0 0 0.0 5 Unmodified _TGLTSASLL_ REV__ENST00000383729.8_2_3:49027379-49027721:+|nuORF 21.74664581756881 0.2544899275067181 3 {[SA]|[TG]}VTT{I|L} 6 -1 28.567 0.0 0.0 3.316 0.0 0.0 0.0 286.13993484518613 286.13993484518613 13.962593819456409 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[SA]|[TG]}VTT{I|L} 3.316 - 149 1 1.474 44584.3 1.0 3459 5216 8672 HBL1_DMSO_200M_050219_1,8677 HBL1_DMSO_200M_050219_1,8677,TGLTSASLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8678 45.64 158.0 553190.0 25 0 62766.0 + 20796 LLVVYPWTQR 10 71 637.8665177237659 1273.7184825143318 2 637.8665649294853 MULTI CID FTMS 0 0 0 -1 0 6 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 59.36838082759317 0.0382430275470746 3 {I|L}{I|L}VVYPWTQR 10 0 + 83.881 0.0 0.0 6.5855 6.5855 89.09 0.0 0.0 0.0 66.96980756981588 12.800857501608434 12.800857501608434 9.164539485499262 0 1.424742501084005 1.6989700043360187 0.3494850021680094 0.8494850021680094 + + {I|L}{I|L}VVYPWTQR;{I|L}{I|L}VVYPWT[AG]R;{I|L}{I|L}VVYP{[CP]|[EA]}[KS]R 6.5855;5.866;5.2937 +;-;- + 292 + 1 1.474 70000.8 1.0 3460 5216 8672 HBL1_DMSO_200M_050219_1,8678 HBL1_DMSO_200M_050219_1,8678,LLVVYPWTQR True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8679 45.643 150.0 473790.0 25 0 24907.0 + 6095 DSRMEIHTV 9 117 363.1783661813045 1086.5132691441136 3 363.1781494021416 MULTI CID FTMS 0 0 0 8672 319654.71875 0.5312506621838293 -2 0.1697502136230468 7 Unmodified _DSRMEIHTV_ ENSG00000177125|ENST00000319119|ZBTB34;nc|ENSG00000177125|Q8NCN2|ZBTB34 39.94969957227396 0.0757326808254658 3 [H{I|L}]S{I|L}E{[WT]|[RM]}SD 9 8 + 37.681 0.0 0.0 3.468 3.468 75.325 0.0 0.0 0.0 4.771212547196626 13.290383093420484 4.771212547196626 4.771212547196626 0 0.0 0.0 0.4247425010840047 0.0 [H{I|L}]S{I|L}E{[WT]|[RM]}SD;[HT]V{I|L}E{[WT]|[RM]}SD;[{I|L}V][HT]E{[WT]|[RM]}SD;[{I|L}V][C(Carbamidomethyl (C))M]{I|L}[H{I|L}]SD;[HT][HQ]{I|L}[H{I|L}]SD;[H{I|L}]S[KG]G{[WT]|[RM]}SD;{[HG]|PP}[KQ]E{[WT]|[RM]}SD;[H{I|L}]S{I|L}[C(Carbamidomethyl (C))N][KT]D;[YG]{[WT]|[RM]}E{I|L}[YR];[HT]V[KG]G{[WT]|[RM]}SD 3.468;3.0289;2.4677;2.0298;1.9201;1.8427;1.7147;1.6284;1.4231;1.4036 -;-;-;-;-;-;-;-;-;- 363 1 1.474 62810.6 1.0 3461 5216 8672 HBL1_DMSO_200M_050219_1,8679 HBL1_DMSO_200M_050219_1,8679,DSRMEIHTV True True DSRMEIHTV 45.643268 363.178149402142 3922868.25 8672.0 nc|ENSG00000177125|Q8NCN2|ZBTB34;;ENSG00000177125|ENST00000319119|ZBTB34 2.6026440858840942 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8680 45.656 706.0 257440.0 25 0 5982.4 -1 0 137 835.4492091868476 1668.8838654404951 2 835.4479858279228 MULTI CID FTMS 0 0 0 8672 229063.203125 0.0210595610711375 4 -0.3338851928710937 8 3 V{I|L}Q{M(Oxidation (M))|F}SDGS{I|L}P 10 -1 91.117 0.0 0.0 5.4597 0.0 0.0 0.0 622.3210543268186 622.3210543268186 61.13211153262274 0.0 0.0 0.0 0 0.6237125054200234 2.0 0.6989700043360187 0.0 V{I|L}Q{M(Oxidation (M))|F}SDGS{I|L}P 5.4597 - 3659 + 1 1.474 120664.6 1.0 3462 5216 8672 HBL1_DMSO_200M_050219_1,8680 HBL1_DMSO_200M_050219_1,8680, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8681 45.666 599.0 83495.0 25 0 11703.0 -1 0 82 600.0004067514204 1796.9793908544611 3 600.0007812380791 MULTI CID FTMS 0 0 0 8672 202885.171875 0.0187950894518028 4 -0.3338851928710937 9 3 {I|L}{I|L}N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WWAH{I|L}D 11 -1 20.221 0.0 0.0 1.1253 0.0 0.0 0.0 370.20762048892817 370.20762048892817 5.9381991060597485 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WWAH{I|L}D 1.1253 - 92 + 1 1.474 45183.7 1.0 3463 5216 8672 HBL1_DMSO_200M_050219_1,8681 HBL1_DMSO_200M_050219_1,8681, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8682 45.677 634.0 409170.0 25 0 24537.0 + 21866 LPPEQVTKV 9 198 505.7972680726174 1009.5799832120348 2 505.7982055544853 MULTI CID FTMS 0 0 0 8672 203371.875 0.2771515604536974 -12 0.9904518127441406 10 Unmodified _LPPEQVTKV_ ENSG00000124920|ENST00000278836|MYRF;nc|ENSG00000124920|Q9Y2G1-2|MYRF 45.739877483867886 0.0497104363764649 3 {I|L}PPEQVTKV 9 0 + 64.153 0.0 0.0 6.3544 6.3544 86.167 0.0 0.0 0.0 29.80688313432394 6.606729988381417 6.606729988381417 6.606729988381417 0 0.6747425010840047 2.0 0.6139829889124311 0.3921590589602531 + + {I|L}PPEQVTKV;{I|L}PPEQVTVK;{I|L}PPEQVKTV;{I|L}PPEQVKS{I|L};{I|L}PPE[AG]VTKV;{I|L}PPE[AG]VTVK;{I|L}PPE[AG]VKTV;{I|L}PPE[AG]VKS{I|L};{I|L}PP[TP]{[SA]|[TG]}TKV;{I|L}PP[TP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KV 6.3544;5.7;5.6312;5.5902;5.4424;4.788;4.7191;4.6781;4.5328;4.2346 +;-;-;-;-;-;-;-;-;- + 1684 + 1 1.474 197679.8 1.0 3464 5216 8672 HBL1_DMSO_200M_050219_1,8682 HBL1_DMSO_200M_050219_1,8682,LPPEQVTKV True True LPPEQVTKV 45.67708 505.7973 20262010.0 8672.0 nc|ENSG00000124920|Q9Y2G1-2|MYRF;;ENSG00000124920|ENST00000278836|MYRF 4.758611996968587 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8683 45.69 743.0 124890.0 25 0 9062.0 -1 0 139 665.5888969611367 0 665.8904907107353 PEAK CID FTMS 0 0 0 -1 0 11 3 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.29939 0.0 0.0 761.9380955806733 417.1284884088501 1179.0665839895237 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.29939 - 49 + 1 1.474 70772.1 1.0 3465 5216 8672 HBL1_DMSO_200M_050219_1,8683 HBL1_DMSO_200M_050219_1,8683, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8684 45.704 800.0 101040.0 25 0 4917.4 -1 MVMRCGWRARR 11 100 747.8688422537651 0 747.8687621951103 PEAK CID FTMS 0 0 0 8672 94990.2578125 0.954105038120641 -1 0.1004524230957031 12 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))VMRC(Carbamidomethyl (C))GWRARR_ ENST00000514450.2_1_4:15471657-15513157:+|nuORF 3.2813086475875832 0.4761840153648598 3 {I|L}GYE 4 -1 28.276 0.0 0.0 1.893 0.0 0.0 310.09611417345906 718.3869112604124 1028.4830254338715 0.0 0.0 0.0 0.0 0 1.0228787452803376 0.0 0.0 0.0 {I|L}GYE 1.893 - 181 + 1 1.474 62739.8 0.949999988079071 3466 5216 8672 HBL1_DMSO_200M_050219_1,8684 HBL1_DMSO_200M_050219_1,8684,MVMRCGWRARR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8685 45.719 800.0 52141.0 25 0 3326.7 -1 WFWRVRNNRVM 11 74 790.4063640837179 1578.7981752342355 2 790.4056274294853 MULTI CID FTMS 0 0 0 8672 97253.375 0.0247237817048457 3 -0.2639579772949219 13 Oxidation (M) _WFWRVRNNRVM(Oxidation (M))_ ENSG00000156103|ENST00000286614|MMP16;nc|ENSG00000156103|P51512-2|MMP16 0.3070304955306653 0.8736993455979228 3 {I|L}KWD 4 -1 18.66 0.0 0.0 1.1819 0.0 0.0 547.2303784586483 486.23269102715904 1033.4630694858074 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 {I|L}KWD 1.1819 - 91 + 1 1.474 35956.6 0.8999999761581421 3467 5216 8672 HBL1_DMSO_200M_050219_1,8685 HBL1_DMSO_200M_050219_1,8685,WFWRVRNNRVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8686 45.732 735.0 126010.0 25 0 7686.6 10792 FYQHNVEKL 9 152 589.3038695661827 1176.5931861991653 2 589.3040649294853 MULTI CID FTMS 0 0 0 8672 84356.5 1.0 0 0.0 14 Unmodified _FYQHNVEKL_ ENSG00000227345|ENST00000616448|PARG;nc|ENSG00000227345|Q86W56-2|PARG;nc|ENSG00000227345|Q86W56-3|PARG 34.40172386719151 0.1061884637610825 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EYK[HT]{I|L}K 9 8 + 21.995 0.0 0.0 1.8694 1.8694 72.518 0.0 0.0 0.0 0.7378621416091846 4.524102183867242 0.7378621416091846 4.524102183867242 0 0.5 0.0 0.0 0.4476212463643422 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EYK[HT]{I|L}K;[VS]AN{[C(Carbamidomethyl (C))G]|[NC]}TVE{I|L}K;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EYK[HT]K{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{[C(Carbamidomethyl (C))G]|[NC]}TVE{I|L}K;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[KA][QA]M{I|L}K;{[TV]|[{I|L}S]}GN{[C(Carbamidomethyl (C))G]|[NC]}TVE{I|L}K;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HT][YK]E{I|L}K;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[KA][QA]MK{I|L};{[SA]|[TG]}VN{[C(Carbamidomethyl (C))G]|[NC]}TVE{I|L}K;[VS]AGG{[C(Carbamidomethyl (C))G]|[NC]}TVE{I|L}K 1.8694;1.4849;1.4538;1.346;1.193;1.055;0.99168;0.77742;0.74754;0.70906 -;-;-;-;-;-;-;-;-;- 599 + 1 1.474 74155.1 1.0 3468 5216 8672 HBL1_DMSO_200M_050219_1,8686 HBL1_DMSO_200M_050219_1,8686,FYQHNVEKL True True RIIDKYEKI 45.731861 589.304064929485 140852.578125 8672.0 ENSG00000173145|ENST00000371361|NOC3L 3.9909447034200034 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8687 45.747 784.0 51183.0 25 0 1977.3 + -1 LIVFLICPWF 10 98 654.3636385255134 0 654.3651000857353 PEAK CID FTMS 0 0 0 8672 87225.8046875 1.0 0 0.0 15 Carbamidomethyl (C) _LIVFLIC(Carbamidomethyl (C))PWF_ REV__ENSG00000179869|ENST00000435803|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-2|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-4|ABCA13;REV__nc|ENSG00000179869|Q86UQ4|ABCA13 12.531546534597751 0.3556095723513364 3 VVY 3 -1 25.005 0.0 0.0 1.9136 0.0 0.0 226.1633599594266 716.3180025690061 942.4813625284328 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 VVY 1.9136 - 41 + 1 1.474 34064.4 1.0 3469 5216 8672 HBL1_DMSO_200M_050219_1,8687 HBL1_DMSO_200M_050219_1,8687,LIVFLICPWF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8689 45.751 4.1 23157000.0 25 0 2492200.0 + 24956 MPPPPPQGV 9 101 460.2385793050109 918.462605676822 2 460.2391540408134 MULTI CID FTMS 0 0 0 8688 8350852.5 0.2774055515574848 -6 0.4958534240722656 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 81.86404211737425 0.017065112157077 3 {NN|[MP]|[D{I|L}]|[EV]}PPPPQGV 9 0 + 58.72 0.0 0.0 6.3933 6.3933 80.806 0.0 0.0 0.0 2.283927154942944 6.478174818886373 2.283927154942944 2.283927154942944 0 1.9049471895720984 0.0 0.3807196863200844 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;[VG]EHPPQGV;{[HG]|PP}MPPPQGV;[PS]THPPQGV;[VG]EPHPQGV;[NP]NPPPQGV;[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}PQGV;[PS]TPHPQGV;[QP]PPPPMGV;{NN|[MP]|[D{I|L}]|[EV]}PPQ[HN]V 6.3933;6.1447;5.4344;5.3386;5.2107;4.8094;4.4118;4.4046;4.2796;4.0069 +;-;-;-;-;-;-;-;-;- + 984 1 1.476 79448.1 1.0 3470 5217 8688 HBL1_DMSO_200M_050219_1,8689 HBL1_DMSO_200M_050219_1,8689,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8690 45.752 26.0 1033600.0 25 0 149870.0 + 3822 DAIRTSEI 8 57 452.7401894790335 903.4658260248668 2 452.7405273318291 MULTI CID FTMS 0 0 0 8688 696987.75 0.0592131655353949 2 -0.1452598571777343 2 Unmodified _DAIRTSEI_ ENSG00000143612|ENST00000368521|C1orf43;nc|nan|Q9BWL3-2|C1orf43;nc|nan|Q9BWL3-3|C1orf43 20.453626601364224 0.6087503291685402 3 {[DA]|[EG]}{I|L} 3 5 29.934 0.0 0.0 3.3132 0.0 0.0 0.0 601.2994478815061 601.2994478815061 14.449237304209888 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}{I|L} 3.3132 + + 13 + 1 1.476 24198.5 1.0 3471 5217 8688 HBL1_DMSO_200M_050219_1,8690 HBL1_DMSO_200M_050219_1,8690,DAIRTSEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8691 45.753 25.0 1689600.0 25 0 239110.0 + 34923 SQIQEFKEA 9 77 540.2721696884956 1078.5297864437912 2 540.2723266482353 MULTI CID FTMS 0 0 0 8688 1855579.5 0.622829002751004 -1 0.1186981201171875 3 Unmodified _SQIQEFKEA_ ENSG00000101335|ENST00000279022|MYL9;ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B;ENST00000577510.5_1_18:3252320-3253446:+|nuORF;ENST00000580353.1_1_18:3247898-3253446:+|nuORF;nc|ENSG00000101335|P24844-2|MYL9 37.07464296494664 0.0915153923251136 3 {[QS]|[NT]}{I|L}QE{M(Oxidation (M))|F} 6 3 55.283 0.0 0.0 5.1258 0.0 0.0 0.0 343.16315637760005 343.16315637760005 38.10402823752675 0.0 0.0 0.0 0 1.2614393726401687 0.9208187539523752 0.3807196863200844 0.4247425010840047 + {[QS]|[NT]}{I|L}QE{M(Oxidation (M))|F} 5.1258 + + 226 + 1 1.476 38402.6 1.0 3472 5217 8688 HBL1_DMSO_200M_050219_1,8691 HBL1_DMSO_200M_050219_1,8691,SQIQEFKEA True True SQIQEFKEA 45.753484 540.272326648235 17191464.0 8688.0 nc|ENSG00000101335|P24844-2|MYL9;;ENST00000577510.5_1_18:3252320-3253446:+|nuORF;;ENSG00000101608|ENST00000217652|MYL12A;;ENSG00000101335|ENST00000279022|MYL9;;ENST00000580353.1_1_18:3247898-3253446:+|nuORF;;ENSG00000118680|ENST00000237500|MYL12B 6.212194919586182 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8692 45.755 32.0 1196000.0 25 0 169460.0 + -1 SACFMNDTV 9 80 530.7070142950334 1059.3994756568668 2 530.7073852419853 MULTI CID FTMS 0 0 0 8688 1599204.75 0.2516252453386058 1 -0.0802268981933593 4 Carbamidomethyl (C),Oxidation (M) _SAC(Carbamidomethyl (C))FM(Oxidation (M))NDTV_ REV__ENSG00000149090|ENST00000619888|PAMR1;REV__nc|ENSG00000149090|Q6UXH9-2|PAMR1;REV__nc|ENSG00000149090|Q6UXH9-3|PAMR1 12.531546534597751 0.4974689918368763 3 {[DA]|[EG]}YDEY 6 -1 34.9 0.0 0.0 3.2943 0.0 0.0 0.0 300.1183226629793 300.1183226629793 14.894549897933878 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 {[DA]|[EG]}YDEY 3.2943 - 82 1 1.476 38189.9 1.0 3473 5217 8688 HBL1_DMSO_200M_050219_1,8692 HBL1_DMSO_200M_050219_1,8692,SACFMNDTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8693 45.756 32.0 3932000.0 25 0 435720.0 + 32658 SDAMYLVTH 9 104 518.7435828376164 1035.4726127420329 2 518.7438232302666 MULTI CID FTMS 0 0 0 8688 1512675.125 0.2185226882271945 1 -0.0802268981933593 5 Unmodified _SDAMYLVTH_ REV__ENSG00000167196|ENST00000308275|FBXO22;REV__nc|ENSG00000167196|Q8NEZ5-3|FBXO22 20.453626601364224 0.2830276176381075 3 SDAVRDDMK 9 -1 + 65.516 0.0 0.0 6.3272 6.3272 89.668 0.0 0.0 0.0 41.27091397840822 4.097200695509287 4.097200695509287 9.67674114497312 0 0.9247425010840048 1.5228787452803376 1.110924374808178 0.0 SDAVRDDMK;SDAP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MMK;SDAV[HQ][HD]K;SDAP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YQ]V;SDAP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TA]{[MS]|[{M(Oxidation (M))|F}A]};SWVRDDMK;SWP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MMK;SWP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YQ]V;{[DS]|[MA]|[CV]|TT}SEVKWW;SWP[QT]{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]} 6.3272;5.3927;5.0715;5.0441;3.7705;3.748;2.8135;2.4649;2.2286;1.3561 -;-;-;-;-;-;-;-;-;- 328 + 1 1.476 98618.9 1.0 3474 5217 8688 HBL1_DMSO_200M_050219_1,8693 HBL1_DMSO_200M_050219_1,8693,SDAMYLVTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8694 45.757 28.0 886620.0 25 0 46888.0 + -1 RQLDTETNL 9 63 544.779126217647 1087.543699502094 2 545.2805053591728 MULTI CID FTMS 0 0 0 8688 1296099.625 0.544178856917573 1 -0.0802268981933593 6 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FLLLLC(Carbamidomethyl (C))Y_ ENSG00000047410|ENST00000367478|TPR 17.086550045450526 0.6584923310065985 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L} 3 -1 33.429 0.0 0.0 3.0738 0.0 0.0 0.0 677.3339937799436 677.3339937799436 5.988540307761312 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L} 3.0738 + + 109 + 1 1.476 24551.0 1.0 3475 5217 8688 HBL1_DMSO_200M_050219_1,8694 HBL1_DMSO_200M_050219_1,8694,MFLLLLCY False False RQLDTETNL 45.757019 545.280505359173 14607413.0 8688.0 ENSG00000047410|ENST00000367478|TPR 5.379979292551677 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8695 45.758 55.0 1078100.0 25 0 105650.0 + -1 EGSVCVCLAV 10 97 346.1648519972555 1035.4727265919664 3 346.1647521853447 MULTI CID FTMS 0 0 0 8688 925912.1875 0.1754073706309524 1 -0.0802268981933593 7 Carbamidomethyl (C) _EGSVC(Carbamidomethyl (C))VCLAV_ REV__ENST00000423656.5_1_3:51533973-51534006:-|nuORF 13.614867670302877 0.6190977555336379 3 VVKV 4 -1 23.686 0.0 0.0 2.2874 0.0 0.0 592.1617047187227 0.0 592.1617047187227 0.0 3.139406530592268 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 VVKV 2.2874 - 75 + 1 1.476 55703.7 1.0 3476 5217 8688 HBL1_DMSO_200M_050219_1,8695 HBL1_DMSO_200M_050219_1,8695,EGSVCVCLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8696 45.76 66.0 2729200.0 25 0 500790.0 + 15363 IPNEKIRNI 9 119 366.22080650784426 1095.6405901237329 3 366.2205383181572 MULTI CID FTMS 0 0 0 8688 701219.125 0.1180866087425996 3 -0.2151870727539062 8 Unmodified _IPNEKIRNI_ ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1 53.832793166522166 0.0319663582346103 3 {I|L}PNEK{I|L} 6 3 72.203 0.0 0.0 6.59 0.0 0.0 0.0 398.216529686941 398.216529686941 43.305079032934685 0.0 0.0 0.0 0 0.5356668758921829 1.0 0.0 1.41944517631652 + {I|L}PNEK{I|L} 6.59 + + 445 + 1 1.476 154348.8 1.0 3477 5217 8688 HBL1_DMSO_200M_050219_1,8696 HBL1_DMSO_200M_050219_1,8696,IPNEKIRNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8697 45.762 66.0 646140.0 25 0 57027.0 + 6138 DSYRKQVVI 9 68 554.3110643319119 1106.6075757306237 2 554.3115722537041 MULTI CID FTMS 0 0 0 8688 674541.4375 0.2436531046253318 1 -0.0802268981933593 9 Unmodified _DSYRKQVVI_ ENSG00000133703|ENST00000311936|KRAS;ENSG00000174775|ENST00000311189|HRAS;ENSG00000213281|ENST00000369535|NRAS;nc|ENSG00000133703|P01116|KRAS;nc|ENSG00000174775|P01112-2|HRAS 24.99096001346401 0.2132109383330889 3 KQVV{I|L} 5 4 33.346 0.0 0.0 3.0134 0.0 0.0 521.22368056465 0.0 521.22368056465 0.0 24.851453248366795 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 + KQVV{I|L} 3.0134 + + 122 1 1.476 40017.7 1.0 3478 5217 8688 HBL1_DMSO_200M_050219_1,8697 HBL1_DMSO_200M_050219_1,8697,DSYRKQVVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8698 45.764 95.0 1140900.0 25 0 145840.0 + 5275 DKVETRIH 8 133 499.274774576537 996.534996219874 2 499.2750427126884 MULTI CID FTMS 0 0 0 8688 601728.8125 0.0079556749645879 -7 0.6095809936523438 10 Unmodified _DKVETRIH_ REV__ENSG00000122378|ENST00000606162|PRXL2A;REV__nc|ENSG00000122378|Q9BRX8-2|PRXL2A 7.910154910731844 0.7763180056447161 3 H 1 -1 8.6759 0.0 0.0 0.87061 0.0 0.0 841.4681302304194 0.0 841.4681302304194 0.0 0.2662275597661256 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.87061 + + 95 + 1 1.476 86531.9 1.0 3479 5217 8688 HBL1_DMSO_200M_050219_1,8698 HBL1_DMSO_200M_050219_1,8698,DKVETRIH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8699 45.766 89.0 1643400.0 25 0 215100.0 + 5680 DPHSFPRTV 9 119 352.51388526126686 1054.519826384001 3 352.5137206912041 MULTI CID FTMS 0 0 0 8688 558315.125 0.1383206340527355 3 -0.2151870727539062 11 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 41.95555342248728 0.0647214845423414 3 [WY]S{M(Oxidation (M))|F}PRTV 8 3 + 44.929 0.0 0.0 4.2606 4.2606 71.76 0.0 0.0 0.0 33.960252203101426 6.710930369253553 6.710930369253553 1.0551018476997456 0 0.555462187404089 1.2218487496163564 0.6747425010840047 0.2887254899964357 [WY]S{M(Oxidation (M))|F}PRTV;[DP]HS{M(Oxidation (M))|F}PRTV;{[ET]|[MV]}[K{I|L}]{M(Oxidation (M))|F}SH{[HG]|PP};[WY][HK]{[HG]|PP}EV;[DP]H[HK]{[HG]|PP}EV 4.2606;4.1606;2.0574;0.51692;0.41687 -;+;-;-;- + 166 + 1 1.476 122348.3 1.0 3480 5217 8688 HBL1_DMSO_200M_050219_1,8699 HBL1_DMSO_200M_050219_1,8699,DPHSFPRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8700 45.768 94.0 1747700.0 25 0 255770.0 + 43143 VYPNFRPTPK 10 96 406.89209001885325 0 406.8922912478447 PEAK CID FTMS 0 0 0 8688 485645.90625 0.3470954941439872 -1 0.1186981201171875 12 Unmodified _VYPNFRPTPK_ ENSG00000065518|ENST00000184266|NDUFB4;ENST00000418418.1_1_17:19743579-19743825:+|nuORF;ENST00000513465.1_1_4:43901008-43901365:+|nuORF;nc|ENSG00000065518|O95168-2|NDUFB4 51.76506608216692 0.039127503007562 3 PTR 3 8 14.398 0.0 0.0 1.7736 0.0 0.0 99.40321340143436 355.1422518365844 454.5454652380188 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 PTR 1.7736 - 194 + 1 1.476 134250.0 1.0 3481 5217 8688 HBL1_DMSO_200M_050219_1,8700 HBL1_DMSO_200M_050219_1,8700,VYPNFRPTPK True True VYPNFRPTPK 45.767709 406.892291247845 5789331.0 8688.0 ENST00000513465.1_1_4:43901008-43901365:+|nuORF;;ENST00000418418.1_1_17:19743579-19743825:+|nuORF;;ENSG00000065518|ENST00000184266|NDUFB4;;nc|ENSG00000065518|O95168-2|NDUFB4 8.479415893554688 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8701 45.772 252.0 1405800.0 25 0 129850.0 + -1 RKSMSAVM 8 178 471.2302739017799 940.4459948703598 2 471.2299072146416 MULTI CID FTMS 0 0 0 8688 403654.46875 0.3424691816146185 1 -0.0802268981933593 13 2 Oxidation (M) _RKSM(Oxidation (M))SAVM(Oxidation (M))_ REV__ENSG00000076321|ENST00000209884|KLHL20;REV__nc|ENSG00000076321|Q9Y2M5-2|KLHL20 15.847184025352805 0.6768015514314958 3 MPPP 4 -1 58.8 0.0 0.0 6.2524 0.0 0.0 0.0 515.2242554979349 515.2242554979349 30.255762612236907 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 MPPP 6.2524 - 823 + 1 1.476 274240.5 1.0 3482 5217 8688 HBL1_DMSO_200M_050219_1,8701 HBL1_DMSO_200M_050219_1,8701,RKSMSAVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8702 45.779 340.0 1055400.0 25 0 54963.0 -1 0 138 1037.9749124221066 2073.9352719110134 2 1038.476489245892 MULTI CID FTMS 0 0 0 8688 393389.59375 0.0900178447249497 6 -0.4555892944335937 14 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES{M(Oxidation (M))|F}GD{I|L}STPDAV{M(Oxidation (M))|F}GNPK 19 -1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}E + + 117.0 7.4473 1.7598 5.6415 5.6415 57.845 0.0 0.0 0.0 0.0 49.56362337303946 0.0 0.0 0 2.217900182820548 0.0 1.0356668758921828 0.5629529932484498 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES{M(Oxidation (M))|F}GD{I|L}STPDAV{M(Oxidation (M))|F}GNPK 5.6415 - 132842 + 1 1.476 230494.0 1.0 3483 5217 8688 HBL1_DMSO_200M_050219_1,8702 HBL1_DMSO_200M_050219_1,8702, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8703 45.782 183.0 1412700.0 25 0 123740.0 + 3004 AVIREIQNA 9 202 507.29059681576007 1012.5666406983202 2 507.2907287478447 MULTI CID FTMS 0 0 0 8688 389533.40625 0.091153542462266 -2 0.2191505432128906 15 Unmodified _AVIREIQNA_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19762333-19763700:-|nuORF;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 89.40071534611396 0.0152361884002446 3 {[VA]|[{I|L}G]}{I|L}RE{I|L}QNA 9 0 + 72.903 0.0 0.0 7.1999 7.1999 85.649 0.0 0.0 0.0 16.97506540527457 9.50582153349373 9.50582153349373 3.881801713828807 0 1.4452349168877847 2.0 0.0 0.6109243748081782 + + {[VA]|[{I|L}G]}{I|L}RE{I|L}QNA;{[VA]|[{I|L}G]}{I|L}RE{I|L}GANA;{[VA]|[{I|L}G]}{I|L}REAVANA;{[VA]|[{I|L}G]}{I|L}RE{I|L}QGGA;{[VA]|[{I|L}G]}{I|L}RE{I|L}GAGGA;{[VA]|[{I|L}G]}{I|L}REAVAGGA;[R{I|L}]E{I|L}G{I|L}QNA;[R{I|L}]E{I|L}G{I|L}GANA;{[VA]|[{I|L}G]}{I|L}REAN{[VA]|[{I|L}G]}A;{[VA]|[{I|L}G]}{I|L}RTA[TP]NA 7.1999;6.8165;6.3018;6.2905;5.9114;5.3967;5.3583;4.9749;4.9021;4.743 +;-;-;-;-;-;-;-;-;- + 4945 1 1.476 198589.8 1.0 3484 5217 8688 HBL1_DMSO_200M_050219_1,8703 HBL1_DMSO_200M_050219_1,8703,AVIREIQNA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8704 45.786 218.0 552540.0 25 0 59933.0 -1 DCMTVAEIS 9 131 513.2169239321389 1024.4192949310775 2 513.2177612185478 MULTI CID FTMS 0 0 0 8688 321510.0625 0.005657873061434 8 -0.6944046020507812 16 Carbamidomethyl (C) _DC(Carbamidomethyl (C))MTVAEIS_ ENST00000451247.1_1_X:75249949-75250162:+|nuORF 20.453626601364224 0.2830276176381075 3 {[DA]|[EG]}VP{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]T{I|L} 9 -1 + 40.065 0.0 0.0 3.911 3.911 77.927 0.0 0.0 0.0 18.59366274865181 3.0652430620740034 3.0652430620740034 6.323383175227392 0 0.9247425010840048 1.6989700043360187 0.3807196863200844 0.0 {[DA]|[EG]}VP{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]T{I|L};{[DA]|[EG]}CCPT{I|L}[R{M(Oxidation (M))|F}];{[DA]|[EG]}VVE[CS][R{M(Oxidation (M))|F}];{[DA]|[EG]}YYMYS{I|L};{[DA]|[EG]}CC[{I|L}T]P[R{M(Oxidation (M))|F}];{[DA]|[EG]}YYMYTV;{[DA]|[EG]}G[RN][CS][R{M(Oxidation (M))|F}];[PS]TVE[CS][R{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}[PS]E[CS][R{M(Oxidation (M))|F}] 3.911;3.2937;3.0836;1.9619;1.3976;0.97525;0.94781;0.036186;0.0067733 -;-;-;-;-;-;-;-;- 362 + 1 1.476 95861.7 1.0 3485 5217 8688 HBL1_DMSO_200M_050219_1,8704 HBL1_DMSO_200M_050219_1,8704,DCMTVAEIS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8705 45.797 635.0 319510.0 25 0 44487.0 + 15365 IPNEKIRNI 9 159 548.8270044560766 1095.639455978953 2 548.8275024294853 MULTI CID FTMS 0 0 0 8688 302987.25 0.2149648241910167 3 -0.2151870727539062 17 Unmodified _IPNEKIRNI_ ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1 60.07390631473393 0.0260411565414776 3 {I|L}PNEK{I|L}[RV]Q 9 2 + 86.27 0.0 0.0 7.8739 7.8739 89.797 0.0 0.0 0.0 53.83008036311672 2.46462170693448 2.46462170693448 6.239505540695802 0 1.066901560044258 2.0 0.0 1.3539171939081172 {I|L}PNEK{I|L}[RV]Q;{I|L}PNEK{I|L}[RN]{I|L};{I|L}PGGEK{I|L}[RV]Q;{I|L}PGGEK{I|L}[RN]{I|L};{I|L}{I|L}D[RV][KG]Q[PA] 7.8739;7.3044;7.0335;6.464;1.7112 -;+;-;-;- + 1844 + 1 1.476 162397.5 1.0 3486 5217 8688 HBL1_DMSO_200M_050219_1,8705 HBL1_DMSO_200M_050219_1,8705,IPNEKIRNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8706 45.81 728.0 570810.0 25 0 31322.0 -1 DAEMTTRMV 9 252 535.236218315998 0 535.2275268435478 PEAK CID FTMS 0 0 0 -1 0 18 Oxidation (M) _DAEMTTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 15.248480904072842 0.2520662914010398 3 EDT 3 -1 21.209 0.0 0.0 1.985 0.0 0.0 207.0371433341091 513.279756720503 720.316900054612 0.0 0.0 0.0 0.0 0 0.0 0.0 0.850576203518622 0.0 EDT 1.985 - 838 + 1 1.476 309473.9 1.0 3487 5217 8688 HBL1_DMSO_200M_050219_1,8706 HBL1_DMSO_200M_050219_1,8706,DAEMTTRMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8707 45.823 764.0 584280.0 25 0 48927.0 + 31434 RPPPPNSVI 9 258 488.7823434083903 975.5501338835808 2 488.7823669314384 MULTI CID FTMS 0 0 0 8688 217904.671875 0.200886635851342 2 -0.1452598571777343 19 Unmodified _RPPPPNSVI_ ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1 66.45667989310934 0.0225072657982126 3 [RP]P{[HG]|PP}NSV{I|L} 9 0 + 71.676 0.0 0.0 7.3473 7.3473 83.525 0.0 0.0 0.0 8.756691438306149 30.78054450689785 8.756691438306149 2.2746194295838507 0 1.841129063296272 0.721246399047171 0.8494850021680094 0.4124379954164593 + + [RP]P{[HG]|PP}NSV{I|L};[RP][YK]NSV{I|L};[RP]P{[HG]|PP}GGSV{I|L};[RP]P[NP]PSV{I|L};{[VA]|[{I|L}G]}VTTHHV{I|L};[RP][YK]GGSV{I|L};{[QN]|[E{I|L}]|[KN]}K[C(Carbamidomethyl (C))K]SV{I|L};{[TV]|[{I|L}S]}VATHHV{I|L};{[VA]|[{I|L}G]}TVTHHV{I|L};{[HG]|PP}R{[HG]|PP}NSV{I|L} 7.3473;7.1141;6.4034;6.3691;6.3003;6.1647;6.0017;5.6666;5.5838;5.36 +;-;-;-;-;-;-;-;-;- + 6688 1 1.476 333469.9 1.0 3488 5217 8688 HBL1_DMSO_200M_050219_1,8707 HBL1_DMSO_200M_050219_1,8707,RPPPPNSVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8708 45.827 110.0 626580.0 25 0 32934.0 9270 FHSGDKTMEC 10 111 577.7335131570176 1153.452473380835 2 577.7341796755791 MULTI CID FTMS 0 0 0 8688 202359.71875 0.2425126431807118 -2 0.2191505432128906 20 Unmodified _FHSGDKTMEC_ ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3 13.042465956692816 0.6287021003332052 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HNSVE 7 7 58.734 0.0 0.0 5.092 0.0 0.0 0.0 350.08295835688347 350.08295835688347 33.65337304026963 0.0 0.0 0.0 0 0.5 1.154901959985743 1.524227503252014 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HNSVE 5.092 - 429 1 1.476 55941.3 1.0 3489 5217 8688 HBL1_DMSO_200M_050219_1,8708 HBL1_DMSO_200M_050219_1,8708,FHSGDKTMEC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8710 45.831 12.0 4045900.0 25 0 266740.0 + 4353 DASPVTNNTI 10 86 516.2538010195825 1030.493049105965 2 516.2541992068291 MULTI CID FTMS 0 0 0 8709 3455211.0 0.8291678890446733 2 -0.1349601745605468 1 Unmodified _DASPVTNNTI_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 13.90604991867851 0.6142120002215601 3 {[DA]|[EG]}S 3 7 24.181 0.0 0.0 2.3466 0.0 0.0 0.0 754.3734866882493 754.3734866882493 9.955678082598922 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}S 2.3466 + + 250 1 1.476 42167.8 1.0 3490 5218 8709 HBL1_DMSO_200M_050219_1,8710 HBL1_DMSO_200M_050219_1,8710,DASPVTNNTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8711 45.837 314.0 783830.0 25 0 74323.0 -1 VLQLCPVLGD 10 146 557.302818269651 0 557.3019897341728 PEAK CID FTMS 0 0 0 8709 4491588.5 0.1026099139213106 7 -0.6141777038574219 2 Carbamidomethyl (C) _VLQLC(Carbamidomethyl (C))PVLGD_ ENSG00000156990|ENST00000383820|RPUSD3;ENST00000464783.1_1_3:9879702-9882102:-|nuORF;nc|ENSG00000156990|Q6P087-2|RPUSD3;nc|ENSG00000156990|Q6P087-6|RPUSD3;nc|ENSG00000156990|Q6P087|RPUSD3 20.453626601364224 0.2946171403104198 3 G{I|L}AH{I|L}DN{I|L} 8 -1 53.274 0.0 0.0 4.7883 0.0 0.0 133.0470853608336 143.08262048892814 276.12970584976176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5941876774005248 0.8851518780601924 G{I|L}AH{I|L}DN{I|L} 4.7883 - 2415 + 1 1.476 184794.6 1.0 3491 5218 8709 HBL1_DMSO_200M_050219_1,8711 HBL1_DMSO_200M_050219_1,8711,VLQLCPVLGD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8712 45.838 10.0 6668600.0 25 0 473510.0 + 38878 TVKKTFFEDV 10 59 405.2193658408255 1212.6362681226765 3 405.2194091677666 MULTI CID FTMS 0 0 0 8709 4663817.0 0.2187165803990365 -3 0.29937744140625 3 Unmodified _TVKKTFFEDV_ REV__ENSG00000079691|ENST00000329474|CARMIL1;REV__nc|ENSG00000079691|Q5VZK9-2|CARMIL1 9.38312468134398 0.6832340498775793 3 [{M(Oxidation (M))|F}V]{[SA]|[TG]}[KA]Y{I|L}TVD 11 -1 + 48.931 0.0 0.0 4.0351 4.0351 78.557 0.0 0.0 0.0 7.098335460300511 38.15657581846679 7.098335460300511 6.575773191777934 0 0.3252574989159953 2.0 0.5 0.0 [{M(Oxidation (M))|F}V]{[SA]|[TG]}[KA]Y{I|L}TVD;[{M(Oxidation (M))|F}V][Y{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TVD;[{M(Oxidation (M))|F}V]{[SA]|[TG]}[KA]Y{I|L}S{I|L}D;[W{M(Oxidation (M))|F}]{I|L}Y[KA]WTV;[{M(Oxidation (M))|F}V][Y{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}S{I|L}D;[RP][YG][RH]{I|L}TVD;[RP][YG][RH]{I|L}S{I|L}D 4.0351;3.4928;3.1716;2.9575;2.6293;1.4301;0.83482 -;-;-;-;-;-;- 91 1 1.476 58646.5 1.0 3492 5218 8709 HBL1_DMSO_200M_050219_1,8712 HBL1_DMSO_200M_050219_1,8712,TVKKTFFEDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8713 45.84 100.0 120640.0 25 0 9130.6 -1 0 36 603.3022300903604 3011.4747681188014 5 603.5033447146416 MULTI CID FTMS 0 0 0 8709 3396130.25 0.2978209959257265 5 -0.3753623962402344 4 3 {I|L} 1 -1 6.9897 0.0 0.0 0.2321 0.0 0.0 2091.993214018996 803.3787935846311 2895.3720076036266 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.2321 - 3 + 1 1.476 19729.1 1.0 3493 5218 8709 HBL1_DMSO_200M_050219_1,8713 HBL1_DMSO_200M_050219_1,8713, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8714 45.843 139.0 96046.0 25 0 10930.0 -1 0 34 628.7213530858459 3138.5703830962293 5 629.1227294802666 MULTI CID FTMS 0 0 0 8709 2391611.25 1.0 0 0.0 5 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.476 20644.3 1.0 3494 5218 8709 HBL1_DMSO_200M_050219_1,8714 HBL1_DMSO_200M_050219_1,8714, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8715 45.847 192.0 245800.0 25 0 79766.0 -1 0 47 593.0029745268458 1775.9870941807374 3 593.3377563357353 MULTI CID FTMS 0 0 0 8709 1598909.375 1.0 0 0.0 6 3 PP 2 -1 7.0783 0.0 0.0 0.39856 0.0 0.0 1182.6667339285873 396.1882113092407 1578.854945237828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.39856 - 8 + 1 1.476 40798.3 1.0 3495 5218 8709 HBL1_DMSO_200M_050219_1,8715 HBL1_DMSO_200M_050219_1,8715, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8716 45.851 240.0 73545.0 25 0 18595.0 -1 0 25 785.9005484253402 3139.5730878349605 4 786.1516601443291 MULTI CID FTMS 0 0 0 8709 1275204.5 0.198431413922314 4 -0.3416633605957031 7 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.476 23437.5 1.0 3496 5218 8709 HBL1_DMSO_200M_050219_1,8716 HBL1_DMSO_200M_050219_1,8716, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8717 45.853 38.0 1147600.0 25 0 120490.0 + + 7480 DAWASDQKV 9 84 509.74333283308016 1017.4721127329605 2 510.2438537478447 MULTI CID FTMS 0 0 0 8709 894733.5625 1.0 0 0.0 8 Unmodified _EGTNEALRE_ ENST00000543152.5_1_16:19590306-19619547:+|nuORF;ENSG00000103544|ENST00000417362|VPS35L;nc|ENSG00000103544|Q7Z3J2-2|VPS35L 14.40537977576856 0.4467465336100671 3 {[WS]|[C(Carbamidomethyl (C)){I|L}]}QENQKV 8 -1 + 35.799 0.0 0.0 3.5184 3.5184 76.832 0.0 0.0 0.0 5.484550065040274 8.626039101591907 5.484550065040274 6.251837901750996 0 0.3252574989159953 0.0 0.0 0.3494850021680094 {[WS]|[C(Carbamidomethyl (C)){I|L}]}QENQKV;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}ENQKV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}QEA{I|L}WV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}QEA{I|L}ER;{[WS]|[C(Carbamidomethyl (C)){I|L}]}QEGGQKV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}QEN[AG]KV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[AG]ENQKV;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}EA{I|L}WV;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}EA{I|L}ER;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}EGGQKV 3.5184;2.9039;2.7563;2.6706;2.6081;2.6081;2.6081;2.1418;2.0562;1.9989 -;-;-;-;-;-;-;-;-;- 279 + 1 1.476 39567.7 1.0 3497 5218 8709 HBL1_DMSO_200M_050219_1,8717 HBL1_DMSO_200M_050219_1,8717,EGTNEALRE False False DAWASDQKV 45.852608 510.243853747845 4668736.0 8709.0 ENST00000543152.5_1_16:19590306-19619547:+|nuORF;;ENSG00000103544|ENST00000417362|VPS35L;;nc|ENSG00000103544|Q7Z3J2-2|VPS35L 8.148912111918131 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8718 45.854 56.0 1109200.0 25 0 96522.0 + 18517 KYQEVTNNL 9 104 554.7853453449497 1107.5561377566994 2 554.7856323122978 MULTI CID FTMS 0 0 0 8709 764456.125 0.1393275741904958 -3 0.29937744140625 9 Unmodified _KYQEVTNNL_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 99.7552728972412 0.0110101799492648 3 DNTVEKC(Carbamidomethyl (C)){I|L} 8 7 80.439 0.0 0.0 7.2628 0.0 0.0 130.10891412260452 0.0 130.10891412260452 0.0 46.49075014930391 0.0 0.0 0 1.1382104921644451 0.0 1.4634679910804405 1.309894379144197 DNTVEKC(Carbamidomethyl (C)){I|L} 7.2628 - 1778 + 1 1.476 53453.9 1.0 3498 5218 8709 HBL1_DMSO_200M_050219_1,8718 HBL1_DMSO_200M_050219_1,8718,KYQEVTNNL True True KYQEVTNNL 45.854039 554.785632312298 71077048.0 8709.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 6.947800318400065 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8719 45.856 76.0 740170.0 25 0 67149.0 + 13080 HEATDSGVAAL 11 90 535.7593277287427 1069.5041025242854 2 535.7592040896416 MULTI CID FTMS 0 0 0 8709 738612.8125 0.6130403797862862 -1 0.0802268981933593 10 Unmodified _HEATDSGVAAL_ REV__ENST00000536896.2_1_1:26145941-26146436:-|nuORF 29.081581746732265 0.4093582134107448 3 ETDRGTA{I|L} 8 -1 63.033 0.0 0.0 5.8937 0.0 0.0 208.08494765449376 0.0 208.08494765449376 0.0 51.606413240959625 0.0 0.0 0 2.1237125054200234 0.0 0.7742275032520141 0.0 ETDRGTA{I|L} 5.8937 - 484 1 1.476 48235.5 1.0 3499 5218 8709 HBL1_DMSO_200M_050219_1,8719 HBL1_DMSO_200M_050219_1,8719,HEATDSGVAAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8720 45.857 49.0 1229400.0 25 0 111800.0 43297 WKKWKKHQKKL 11 90 385.2418546520829 1536.9383127419314 4 385.4915649294853 MULTI CID FTMS 0 0 0 8709 718643.1875 0.7469420681118831 -1 0.0802268981933593 11 Unmodified _WKKWKKHQKKL_ ENSG00000232113|ENST00000417563|TEX50 0.0948413911109767 0.8747004676205551 3 {I|L} 1 10 13.979 0.0 0.0 0.90956 0.0 0.0 1405.8435536860704 0.0 1405.8435536860704 0.0 4.0645667832142784 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.90956 + + 141 + 1 1.476 55332.4 1.0 3500 5218 8709 HBL1_DMSO_200M_050219_1,8720 HBL1_DMSO_200M_050219_1,8720,WKKWKKHQKKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8721 45.859 101.0 1007900.0 25 0 121160.0 + 43830 YFHDATRVY 9 93 586.2801047414096 1170.545656549619 2 586.2802612185478 MULTI CID FTMS 0 0 0 8709 627417.9375 0.74818812684789 -1 0.0802268981933593 12 Unmodified _YFHDATRVY_ chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;ENSG00000087586|ENST00000395915|AURKA 34.93206674587334 0.1032771302489716 3 Y{M(Oxidation (M))|F}HDA 5 4 51.81 0.0 0.0 4.4262 0.0 0.0 0.0 534.26902984558 534.26902984558 30.84121882396211 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.3807196863200844 0.0 + Y{M(Oxidation (M))|F}HDA 4.4262 + + 244 + 1 1.476 76817.8 1.0 3501 5218 8709 HBL1_DMSO_200M_050219_1,8721 HBL1_DMSO_200M_050219_1,8721,YFHDATRVY True True YFHDATRVY 45.859275 586.280261218548 15703291.0 8709.0 chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;;ENSG00000087586|ENST00000395915|AURKA 5.432090600331624 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8722 45.861 70.0 657230.0 25 0 58200.0 2400 AQPLSHRQ 8 86 468.7523884023757 935.4902238715514 2 468.7523681521416 MULTI CID FTMS 0 0 0 8709 598391.0625 0.6618413364052528 -1 0.0802268981933593 13 Unmodified _AQPLSHRQ_ ENSG00000185775|ENST00000332857|SPATA31A6 11.640296217721598 0.738950129755968 3 QPP[{M(Oxidation (M))|F}T]GV 7 6 27.747 0.0 0.0 2.966 0.0 0.0 191.13110629518263 0.0 191.13110629518263 0.0 15.867741687532089 0.0 0.0 0 0.0 0.0 0.0 0.0 QPP[{M(Oxidation (M))|F}T]GV 2.966 - 294 + 1 1.476 42887.1 1.0 3502 5218 8709 HBL1_DMSO_200M_050219_1,8722 HBL1_DMSO_200M_050219_1,8722,AQPLSHRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8723 45.862 47.0 1177500.0 25 0 214840.0 + 34641 SPPPPNPVV 9 82 452.250555006818 902.486557080436 2 452.2502624392509 MULTI CID FTMS 0 0 0 8709 574559.375 0.5820090913695299 -3 0.29937744140625 14 Unmodified _SPPPPNPVV_ ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A 21.74664581756881 0.2544899275067181 3 [PS][YK]N 5 6 18.729 0.0 0.0 2.0752 0.0 0.0 0.0 310.1776360147066 310.1776360147066 5.233871898888154 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.3494850021680094 [PS][YK]N 2.0752 - 103 1 1.476 49136.7 1.0 3503 5218 8709 HBL1_DMSO_200M_050219_1,8723 HBL1_DMSO_200M_050219_1,8723,SPPPPNPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8724 45.864 96.0 1019800.0 25 0 77760.0 + 31529 RQIHKFEEL 9 120 400.55623797222336 1198.6468845168702 3 400.5557128787041 MULTI CID FTMS 0 0 0 8709 575012.8125 0.6196972859682308 -1 0.0802268981933593 15 Unmodified _RQIHKFEEL_ ENSG00000100129|ENST00000652021|EIF3L;ENST00000460638.1_1_22:38282753-38284468:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L;RAF1-EIF3L|1|fusion 31.26834338654808 0.1333407332142048 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}HKE{M(Oxidation (M))|F}E{I|L} 9 2 + 52.898 0.0 0.0 4.4131 4.4131 74.131 0.0 0.0 0.0 2.218487496163561 9.048246627886982 2.218487496163561 2.218487496163561 0 0.4247425010840047 0.0 0.8807196863200843 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}HKE{M(Oxidation (M))|F}E{I|L};[AG]R{I|L}HKE{M(Oxidation (M))|F}E{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}HK{M(Oxidation (M))|F}EE{I|L};[AG]R{I|L}HK{M(Oxidation (M))|F}EE{I|L};{[HG]|PP}RRRE{M(Oxidation (M))|F}E{I|L};[RP]PRRE{M(Oxidation (M))|F}E{I|L};{[HG]|PP}RRR{M(Oxidation (M))|F}EE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}H[Y{I|L}]QE{I|L};[RP]PRR{M(Oxidation (M))|F}EE{I|L};{[HG]|PP}R[VG]RE{M(Oxidation (M))|F}E{I|L} 4.4131;4.228;3.8491;3.664;2.9733;2.7883;2.4093;2.3508;2.2242;2.2051 -;-;+;-;-;-;-;-;-;- + 1485 1 1.476 79761.7 1.0 3504 5218 8709 HBL1_DMSO_200M_050219_1,8724 HBL1_DMSO_200M_050219_1,8724,RQIHKFEEL False True RQIHKFEEL 45.864273 400.555712878704 3566429.5 8709.0 RAF1-EIF3L|1|fusion;;nc|ENSG00000100129|Q9Y262-2|EIF3L;;ENST00000460638.1_1_22:38282753-38284468:+|nuORF;;ENSG00000100129|ENST00000652021|EIF3L 5.627774556477864 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8725 45.874 570.0 80189.0 25 0 25839.0 -1 0 59 1005.165515124798 0 1005.165515124798 PEAK CID FTMS 0 0 0 -1 0 16 3 {I|L}SA{I|L}H{M(Oxidation (M))|F} 6 -1 22.652 0.0 0.0 1.1279 0.0 0.0 817.682152220496 519.2564791315061 1336.9386313520022 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}SA{I|L}H{M(Oxidation (M))|F} 1.1279 - 276 + 1 1.476 39224.9 1.0 3505 5218 8709 HBL1_DMSO_200M_050219_1,8725 HBL1_DMSO_200M_050219_1,8725, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8726 45.876 97.0 678990.0 25 0 82178.0 + 2326 AQITGTEHL 9 95 485.25344647794697 968.492340022694 2 485.2538024783134 MULTI CID FTMS 0 0 0 8709 471082.78125 0.7124446442434125 -1 0.0802268981933593 17 Unmodified _AQITGTEHL_ ENSG00000163110|ENST00000317968|PDLIM5;nc|ENSG00000163110|Q96HC4-2|PDLIM5;nc|ENSG00000163110|Q96HC4-3|PDLIM5;nc|ENSG00000163110|Q96HC4-4|PDLIM5;nc|ENSG00000163110|Q96HC4-6|PDLIM5;nc|ENSG00000163110|Q96HC4-7|PDLIM5 58.6788170122104 0.0268135626297836 3 [QA]{I|L}TASE[H{I|L}] 9 2 + 70.358 0.0 0.0 7.2647 7.2647 89.435 0.0 0.0 0.0 56.261233821950114 7.147642715192504 7.147642715192504 7.3290220443144705 0 1.6307196863200843 0.9208187539523752 1.1989700043360187 0.0 [QA]{I|L}TASE[H{I|L}];[QA]{I|L}TGTE[H{I|L}];[QA]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[H{I|L}];[QA]{I|L}[DG]A[QA]VP;[QA]{I|L}[DG]A[QA]PV;[QA]{I|L}[DG]A[VP][QA];[QA]{I|L}{I|L}C[EP]VP;[QA]{I|L}YY{I|L}[QA];[QA][TP]SA[VP][QA];[QA]{I|L}{I|L}C[EP]PV 7.2647;6.508;4.8633;3.9393;3.8794;3.6562;3.5308;3.52;3.5008;3.4709 -;+;-;-;-;-;-;-;-;- + 443 + 1 1.476 55682.6 1.0 3506 5218 8709 HBL1_DMSO_200M_050219_1,8726 HBL1_DMSO_200M_050219_1,8726,AQITGTEHL True True AQITGTEHL 45.876389 485.253802478313 2339187.0 8709.0 nc|ENSG00000163110|Q96HC4-3|PDLIM5;;nc|ENSG00000163110|Q96HC4-4|PDLIM5;;ENSG00000163110|ENST00000317968|PDLIM5;;nc|ENSG00000163110|Q96HC4-2|PDLIM5;;nc|ENSG00000163110|Q96HC4-6|PDLIM5;;nc|ENSG00000163110|Q96HC4-7|PDLIM5 7.064456303914388 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8727 45.878 87.0 734450.0 25 0 62199.0 + 21829 LPNPSSKAI 9 100 463.7680960787937 925.5216392243874 2 463.7685424685478 MULTI CID FTMS 0 0 0 8709 441561.53125 0.8490026030128422 -1 0.0802268981933593 18 Unmodified _LPNPSSKAI_ ENSG00000129292|ENST00000395386|PHF20L1;ENST00000361997.9_1_8:133790074-133829825:+|nuORF;ENST00000395383.5_1_8:133790074-133836319:+|nuORF;nc|ENSG00000129292|A8MW92-4|PHF20L1 27.628801355627647 0.1796483985696185 3 {I|L}PN[WR]{I|L}Q 7 6 + 48.747 0.0 0.0 5.267 5.267 82.875 0.0 0.0 0.0 25.966002449791688 6.986354166429528 6.986354166429528 6.986354166429528 0 0.5317183090963749 1.5228787452803376 0.0 0.2215141619232908 {I|L}PN[WR]{I|L}Q;{I|L}PN[WR]Q{I|L};{I|L}PN[WR]GA{I|L};{I|L}PNPS[KS]A{I|L};{I|L}[WR][NP]{I|L}Q;{I|L}[WR][NP]Q{I|L};{I|L}[WR][NP]GA{I|L} 5.267;4.5121;4.2916;3.445;2.5315;1.7767;1.5561 -;-;-;+;-;-;- + 253 + 1 1.476 52644.8 1.0 3507 5218 8709 HBL1_DMSO_200M_050219_1,8727 HBL1_DMSO_200M_050219_1,8727,LPNPSSKAI False True LPNPSSKAI 45.878318 463.768542468548 7143009.0 8709.0 ENST00000395383.5_1_8:133790074-133836319:+|nuORF;;ENSG00000129292|ENST00000395386|PHF20L1;;nc|ENSG00000129292|A8MW92-4|PHF20L1;;ENST00000361997.9_1_8:133790074-133829825:+|nuORF 3.074371019999186 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8728 45.881 113.0 709730.0 25 0 51744.0 + 2229 AQDEPAESL 9 110 480.21953782347697 958.424522713754 2 480.2198058962822 MULTI CID FTMS 0 0 0 8709 427645.75 0.3255460768082084 -5 0.4161796569824219 19 Unmodified _AQDEPAESL_ ENSG00000141582|ENST00000269397|CBX4;nc|ENSG00000141582|O00257-3|CBX4 82.5293158979368 0.0169039238599547 3 [QA]DEPAES{I|L} 9 0 + 53.157 0.0 0.0 5.5463 5.5463 82.899 0.0 0.0 0.0 6.020599913279625 7.944539621753535 6.020599913279625 6.020599913279625 0 1.579689690656103 0.0 0.3807196863200844 1.024227503252014 + + [QA]DEPAES{I|L};{[CP]|[EA]}NEPAES{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AEPAES{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QAPAES{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}EAPAES{I|L};{[CP]|[EA]}GGEPAES{I|L};[PA]EA[DG]AES{I|L};{[CP]|[EA]}[DG]APAES{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[AG]APAES{I|L};{[CP]|[EA]}PA[DG]AES{I|L} 5.5463;4.9181;4.5254;3.9;3.8467;3.2281;3.0132;2.914;2.5746;2.3092 +;-;-;-;-;-;-;-;-;- + 391 1 1.476 71716.1 1.0 3508 5218 8709 HBL1_DMSO_200M_050219_1,8728 HBL1_DMSO_200M_050219_1,8728,AQDEPAESL True True AQDEPAESL 45.880677 480.219805896282 15954419.0 8709.0 ENSG00000141582|ENST00000269397|CBX4;;nc|ENSG00000141582|O00257-3|CBX4 5.776931285858154 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8729 45.892 586.0 31774.0 25 0 1610.6 -1 0 43 760.627821445338 3038.482179914952 4 760.8798095583916 MULTI CID FTMS 0 0 0 8709 387400.53125 1.0 0 0.0 20 3 {I|L} 1 -1 6.9897 0.0 0.0 0.23004 0.0 0.0 1854.8638460299887 1067.512633851688 2922.3764798816774 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.23004 - 11 + 1 1.476 21090.3 1.0 3509 5218 8709 HBL1_DMSO_200M_050219_1,8729 HBL1_DMSO_200M_050219_1,8729, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8731 45.896 95.0 75414.0 25 0 6438.7 -1 0 25 753.8765038617306 3011.4769095805223 4 754.1277343630791 MULTI CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.476 15901.7 1.0 3510 5219 8730 HBL1_DMSO_200M_050219_1,8731 HBL1_DMSO_200M_050219_1,8731, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8732 45.899 124.0 431230.0 25 0 34456.0 + 21870 LPPESTQV 8 95 435.73190224853386 869.4492515638677 2 435.7320129275322 MULTI CID FTMS 0 0 0 8730 496153.96875 0.9449377363099156 -5 0.4337081909179687 2 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 20.871210003555333 0.6025813472596342 3 [{I|L}P][EP]S 5 3 18.301 0.0 0.0 2.1049 0.0 0.0 0.0 343.15955364810526 343.15955364810526 2.816206019771528 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5 0.0 + [{I|L}P][EP]S 2.1049 + + 140 1 1.476 46785.4 1.0 3511 5219 8730 HBL1_DMSO_200M_050219_1,8732 HBL1_DMSO_200M_050219_1,8732,LPPESTQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8733 45.9 15.0 5366900.0 25 0 698400.0 + 43831 YFHDATRVY 9 75 391.1891590765208 1170.5456478297624 3 391.1891662478447 MULTI CID FTMS 0 0 0 8730 2960540.5 1.0 0 0.0 3 Unmodified _YFHDATRVY_ chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;ENSG00000087586|ENST00000395915|AURKA 19.361941925380144 0.3125782356748823 3 {[{M(Oxidation (M))|F}H]|[RQ]}[RP]ADH{M(Oxidation (M))|F} 8 7 44.882 0.0 0.0 3.8343 0.0 0.0 0.0 160.0388706558281 160.0388706558281 32.40803747765064 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.4247425010840047 {[{M(Oxidation (M))|F}H]|[RQ]}[RP]ADH{M(Oxidation (M))|F} 3.8343 - 64 1 1.476 70094.8 1.0 3512 5219 8730 HBL1_DMSO_200M_050219_1,8733 HBL1_DMSO_200M_050219_1,8733,YFHDATRVY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8734 45.901 35.0 2666000.0 25 0 1114000.0 + 31395 RPDKVIWWN 9 51 607.3252128271671 1212.635872721134 2 607.3255493044853 MULTI CID FTMS 0 0 0 8730 2017793.0 0.6955368786545393 -2 0.1452598571777343 4 Unmodified _RPDKVIWWN_ REV__ENSG00000130714|ENST00000402686|POMT1;REV__nc|ENSG00000130714|Q9Y6A1-3|POMT1;REV__nc|ENSG00000130714|Q9Y6A1-4|POMT1;REV__nc|ENSG00000130714|Q9Y6A1|POMT1 6.723162845929126 0.6799819581413107 3 DV 2 -1 20.969 0.0 0.0 1.7292 0.0 0.0 0.0 995.5182161943478 995.5182161943478 16.989700043360187 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV 1.7292 - 5 + 1 1.476 71511.6 1.0 3513 5219 8730 HBL1_DMSO_200M_050219_1,8734 HBL1_DMSO_200M_050219_1,8734,RPDKVIWWN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8735 45.903 98.0 712370.0 25 0 113230.0 + + 1213 KYIHSANVL 9 95 348.8694118174692 1043.5864060526076 3 348.8659545779228 MULTI CID FTMS 0 0 0 8730 751572.375 0.1597029481852618 -6 0.4812126159667969 5 Unmodified _AIESTVVNVI_ ENST00000483869.1_1_16:30129346-30134419:-|nuORF;nc|ENSG00000102882|P27361-3|MAPK3;ENSG00000141639|ENST00000400384|MAPK4;nc|ENSG00000100030|P28482-2|MAPK1;ENSG00000102882|ENST00000263025|MAPK3;ENSG00000100030|ENST00000215832|MAPK1;nc|ENSG00000102882|P27361-2|MAPK3;ENST00000478356.5_2_16:30128576-30134273:-|nuORF;ENSG00000069956|ENST00000261845|MAPK6 13.90604991867851 0.6142120002215601 3 [H{I|L}]YKSANV{I|L} 9 -1 + 39.365 0.0 0.0 3.7721 3.7721 81.101 0.0 0.0 0.0 4.7634707425646 17.141899150364928 4.7634707425646 9.208187539523756 0 0.0530758579275314 0.0 0.3494850021680094 0.4247425010840047 [H{I|L}]YKSANV{I|L};[H{I|L}]YKSAGGV{I|L};[KG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VSANV{I|L};[YV]{M(Oxidation (M))|F}{I|L}YKV{I|L};[KG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WANV{I|L};[KG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VSAGGV{I|L};[HS]{[QG]|[NA]}{I|L}YKV{I|L};[KG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WAGGV{I|L};{[SA]|[TG]}[HN]{I|L}YKV{I|L} 3.7721;2.8898;2.8739;2.8165;2.248;1.9958;1.7164;1.3657;1.1192 -;-;-;-;-;-;-;-;- 169 1 1.476 65911.6 1.0 3514 5219 8730 HBL1_DMSO_200M_050219_1,8735 HBL1_DMSO_200M_050219_1,8735,AIESTVVNVI False False KYIHSANVL 45.903408 348.865954577923 31522434.0 8730.0 ENST00000483869.1_1_16:30129346-30134419:-|nuORF;;nc|ENSG00000102882|P27361-3|MAPK3;;ENSG00000141639|ENST00000400384|MAPK4;;nc|ENSG00000100030|P28482-2|MAPK1;;ENSG00000102882|ENST00000263025|MAPK3;;ENSG00000100030|ENST00000215832|MAPK1;;nc|ENSG00000102882|P27361-2|MAPK3;;ENST00000478356.5_2_16:30128576-30134273:-|nuORF;;ENSG00000069956|ENST00000261845|MAPK6 6.093721389770508 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8736 45.905 88.0 693250.0 25 0 64369.0 + 24149 LYQPRASEM 9 84 547.7681740940407 1093.5217952548812 2 547.7692138552666 MULTI CID FTMS 0 0 0 8730 698237.25 0.2068606096211271 -3 0.2639579772949219 6 Unmodified _LYQPRASEM_ ENSG00000168081|ENST00000301908|PNOC;nc|ENSG00000168081|Q13519-2|PNOC 32.78568957990786 0.1150597335874693 3 {I|L}YQ[DN][WK]Q 8 6 + 57.198 0.0 0.0 5.2306 5.2306 76.776 0.0 0.0 0.0 34.34447197927419 1.095756168365014 1.095756168365014 2.2134030500787816 0 0.4247425010840047 2.0 0.4247425010840047 0.6307196863200843 {I|L}YQ[DN][WK]Q;{I|L}YM[EP][WK]Q;{I|L}YQAAQQ{[WS]|[C(Carbamidomethyl (C)){I|L}]};[Y{I|L}][KS]C(Carbamidomethyl (C))[RH]M;[Y{I|L}][YT]Q[Y{I|L}]M;[H{I|L}][Q{I|L}]C(Carbamidomethyl (C))[RH]M;[Y{I|L}][C(Carbamidomethyl (C))R][HA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.2306;5.0282;4.7942;3.0977;2.4992;1.5393;1.222 -;-;-;-;-;-;- 185 + 1 1.476 53350.3 1.0 3515 5219 8730 HBL1_DMSO_200M_050219_1,8736 HBL1_DMSO_200M_050219_1,8736,LYQPRASEM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8737 45.908 130.0 775950.0 25 0 32913.0 + 37726 TLQLETEVL 9 132 523.2936293257328 0 523.2972900271416 PEAK CID FTMS 0 0 0 8730 597110.125 0.2224943424851257 5 -0.3720970153808594 7 Unmodified _TLQLETEVL_ REV__ENSG00000175115|ENST00000320580|PACS1;REV__ENST00000527224.1_1_11:65837957-65984297:+|nuORF;REV__nc|ENSG00000175115|Q6VY07-2|PACS1 19.256988751693697 0.2078072434435185 3 VGSQVPDV 8 -1 19.824 0.0 0.0 1.8978 0.0 0.0 132.09127368877176 128.07200037174064 260.16327406051244 0.0 0.0 0.0 0.0 0 1.1989700043360187 0.0 0.3054621874040891 0.4247425010840047 VGSQVPDV 1.8978 - 772 + 1 1.476 89355.6 1.0 3516 5219 8730 HBL1_DMSO_200M_050219_1,8737 HBL1_DMSO_200M_050219_1,8737,TLQLETEVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8738 45.91 74.0 724770.0 25 0 122640.0 + -1 DGYSVSHQI 9 87 503.23715676745474 502.2298803008548 1 503.2353698611259 MULTI CID FTMS 0 0 0 8730 560745.625 1.0 0 0.0 8 ENSG00000165699|ENST00000298552|TSC1;ENST00000493467.5_1_9:135785858-135804259:-|nuORF;nc|ENSG00000165699|Q92574-2|TSC1 3 V 1 -1 12.218 0.0 0.0 2.4328 0.0 0.0 385.1506546922594 0.0 385.1506546922594 0.0 2.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.4328 - 69 + 1 1.476 46904.5 1.0 3517 5219 8730 HBL1_DMSO_200M_050219_1,8738 HBL1_DMSO_200M_050219_1,8738, False False DGYSVSHQI 45.909739 503.235369861126 2757085.6484375 8730.0 ENSG00000165699|ENST00000298552|TSC1;;ENST00000493467.5_1_9:135785858-135804259:-|nuORF;;nc|ENSG00000165699|Q92574-2|TSC1 5.219765981038411 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8739 45.911 72.0 635070.0 25 0 47363.0 + 6073 DSNPNQPLV 9 89 492.2442573537131 982.4739617742264 2 492.2436401247978 MULTI CID FTMS 0 0 0 8730 470657.3125 0.8440665522640839 -2 0.1452598571777343 9 Unmodified _DSNPNQPLV_ ENSG00000090861|ENST00000261772|AARS1;ENST00000569825.1_1_16:70287541-70292096:-|nuORF;nc|ENSG00000090861|P49588-2|AARS1 26.88365393820708 0.1891292719743517 3 {[ET]|[MV]}[C(Carbamidomethyl (C))H]QP{I|L}V 8 5 {[ET]|[MV]}[C(Carbamidomethyl (C))H]Q + + 14.252 -3.2538 -0.49657 1.4506 1.4506 48.501 0.0 0.0 0.0 0.0 0.3298220087610204 0.0 0.0 0 0.5 0.0 0.0 0.0 {[ET]|[MV]}[C(Carbamidomethyl (C))H]QP{I|L}V 1.4506 - 87 + 1 1.476 41946.2 1.0 3518 5219 8730 HBL1_DMSO_200M_050219_1,8739 HBL1_DMSO_200M_050219_1,8739,DSNPNQPLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8740 45.913 61.0 733530.0 25 0 69794.0 + 3217 AWPEKRGEI 9 71 362.529520375864 1084.566731727792 3 362.5292846560478 MULTI CID FTMS 0 0 0 8730 451965.46875 0.0799754939107368 -9 0.7548408508300781 10 Unmodified _AWPEKRGEI_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 13.90604991867851 0.4602628045680013 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE{I|L} 5 4 38.94 0.0 0.0 3.5904 0.0 0.0 0.0 485.2467135065063 485.2467135065063 27.34636880228201 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE{I|L} 3.5904 - 43 + 1 1.476 46968.3 1.0 3519 5219 8730 HBL1_DMSO_200M_050219_1,8740 HBL1_DMSO_200M_050219_1,8740,AWPEKRGEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8741 45.917 209.0 352860.0 25 0 56118.0 + 2817 AVAAADPRL 9 93 442.2533431158399 882.4921332984798 2 442.2537414431572 MULTI CID FTMS 0 0 0 8730 442890.84375 1.0 0 0.0 11 Unmodified _AVAAADPRL_ ENST00000336273.7_1_8:98656420-98656720:+|nuORF 30.63653989081413 0.1413794767160703 3 {I|L}GAAEG{I|L}[RP] 9 6 + 75.78 0.0 0.0 8.5871 8.5871 97.532 0.0 0.0 0.0 65.94720941673181 1.9754394916729725 1.9754394916729725 30.72559982972642 0 1.742992819099939 2.0 0.0 0.4247425010840047 {I|L}GAAEG{I|L}[RP];{I|L}QAEG{I|L}[RP] 8.5871;5.1054 -;- 269 + 1 1.476 59324.0 1.0 3520 5219 8730 HBL1_DMSO_200M_050219_1,8741 HBL1_DMSO_200M_050219_1,8741,AVAAADPRL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8742 45.92 136.0 368130.0 25 0 26087.0 -1 SSHCAPFSV 9 89 496.22024908328285 990.4259452333656 2 496.2206909060478 MULTI CID FTMS 0 0 0 8730 423030.375 1.0 0 0.0 12 Carbamidomethyl (C) _SSHC(Carbamidomethyl (C))APFSV_ ENST00000481500.1_1_2:242277175-242285749:+|nuORF 21.74664581756881 0.2544899275067181 3 SV 2 -1 21.696 0.0 0.0 2.1906 0.0 0.0 786.3144320271142 0.0 786.3144320271142 0.0 12.605143167364847 0.0 0.0 0 0.3494850021680094 0.0 0.3252574989159953 0.0 SV 2.1906 + + 69 + 1 1.476 44147.0 1.0 3521 5219 8730 HBL1_DMSO_200M_050219_1,8742 HBL1_DMSO_200M_050219_1,8742,SSHCAPFSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8743 45.923 193.0 313430.0 25 0 25638.0 + + 20865 KQISQAYEV 9 109 532.2803377326778 1062.5461225321556 2 533.2825805544853 MULTI CID FTMS 0 0 0 8730 366523.4375 0.4434200379317653 -4 0.364410400390625 13 Unmodified _LMKAMELEV_ nc|ENSG00000086061|P31689-2|DNAJA1;ENSG00000086061|ENST00000330899|DNAJA1 10.823927491677226 0.5436922275383211 3 EYA{[QN]|[E{I|L}]|[KN]}[QP]V 8 -1 29.87 0.0 0.0 2.8112 0.0 0.0 115.0729912839118 0.0 115.0729912839118 0.0 19.68896441089612 0.0 0.0 0 0.0 0.0 0.0 1.048455006504028 EYA{[QN]|[E{I|L}]|[KN]}[QP]V 2.8112 - 146 + 1 1.476 50390.1 1.0 3522 5219 8730 HBL1_DMSO_200M_050219_1,8743 HBL1_DMSO_200M_050219_1,8743,LMKAMELEV False False KQISQAYEV 45.923343 533.282580554485 1595652.625 8730.0 nc|ENSG00000086061|P31689-2|DNAJA1;;ENSG00000086061|ENST00000330899|DNAJA1 3.4735310872395835 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8744 45.926 116.0 384960.0 25 0 13224.0 + -1 FMDNTCVW 8 103 544.7121980788972 1087.4098432245944 2 544.7128173708916 MULTI CID FTMS 0 0 0 8730 357506.8125 0.7960014491960017 1 -0.0699272155761718 14 Carbamidomethyl (C),Oxidation (M) _FM(Oxidation (M))DNTC(Carbamidomethyl (C))VW_ REV__ENSG00000102898|ENST00000219169|NUTF2 6.354104778181461 0.7857632046190106 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L} 3 -1 25.062 0.0 0.0 2.3047 0.0 0.0 0.0 677.1992163537537 677.1992163537537 9.57711861032834 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L} 2.3047 - 55 1 1.476 39469.5 1.0 3523 5219 8730 HBL1_DMSO_200M_050219_1,8744 HBL1_DMSO_200M_050219_1,8744,FMDNTCVW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8745 45.935 530.0 197970.0 25 0 24742.0 + 32613 SAYDGKDYIA 10 123 551.7559231439695 1101.497293354739 2 551.7565795779228 MULTI CID FTMS 0 0 0 8730 364778.3125 1.0 0 0.0 15 Unmodified _SAYDGKDYIA_ ENSG00000204525|ENST00000376228|HLA-C;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;nc|ENSG00000204525|P10321-2|HLA-C 19.361941925380144 0.5226674314761524 3 [YV][NS]SWY[{I|L}A] 9 6 + 19.171 0.0 0.0 1.7405 1.7405 68.576 0.0 0.0 0.0 1.2662818281869903 2.8499067491394925 1.2662818281869903 1.8808066190589336 0 0.0 2.0 0.0 0.5 [YV][NS]SWY[{I|L}A];{[SA]|[TG]}G{[CP]|[EA]}YY{I|L}[QT];{[SA]|[TG]}AADYY{I|L}[QT];{[SA]|[TG]}AAYDY{I|L}[QT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))R]WY[{I|L}A];[YV][NS]DY{I|L}[QT];{[SA]|[TG]}AADY{I|L}Y[QT];{[SA]|[TG]}G{[CP]|[EA]}Y{I|L}Y[QT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]SWY[{I|L}A];{[SA]|[TG]}AAYSWY[{I|L}A] 1.7405;1.5697;1.5697;1.4817;1.4528;1.4353;1.4098;1.4098;1.4064;1.333 -;-;-;-;-;-;-;-;-;- 688 1 1.476 83408.5 1.0 3524 5219 8730 HBL1_DMSO_200M_050219_1,8745 HBL1_DMSO_200M_050219_1,8745,SAYDGKDYIA False True SAYDGKDYIA 45.935102 551.756579577923 1089105.125 8730.0 nc|ENSG00000204525|P10321-2|HLA-C;;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;;ENSG00000204525|ENST00000376228|HLA-C 3.164928356806437 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8746 45.938 163.0 336830.0 25 0 27120.0 + 33363 SGIPEKDLHSV 11 84 394.54352539613984 1180.6087467886196 3 394.8841430544853 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _SGIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 9.530100786504857 0.8301842989142968 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEKD{I|L}H[VS] 10 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} + + 12.834 6.0033 2.3346 1.0871 1.0871 48.381 0.0 0.0 0.0 0.0 4.629427805345756 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEKD{I|L}H[VS] 1.0871 - 238 + 1 1.476 51225.1 1.0 3525 5219 8730 HBL1_DMSO_200M_050219_1,8746 HBL1_DMSO_200M_050219_1,8746,SGIPEKDLHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8747 45.943 229.0 157780.0 25 0 12370.0 -1 VSVMDSMV 8 73 450.1971639525187 0 449.7439453005791 PEAK CID FTMS 0 0 0 -1 0 17 2 Oxidation (M) _VSVM(Oxidation (M))DSM(Oxidation (M))V_ ENST00000422550.2_X:103230649-103230895:+|nuORF 5.760428011301431 0.5786759180849727 3 T 1 -1 4.6041 0.0 0.0 0.51249 0.0 0.0 680.2527893534765 114.05658136539296 794.3093707188694 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.51249 - 32 + 1 1.476 32897.1 1.0 3526 5219 8730 HBL1_DMSO_200M_050219_1,8747 HBL1_DMSO_200M_050219_1,8747,VSVMDSMV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8748 45.947 227.0 218450.0 25 0 13809.0 + 2347 AQLIDKTKL 9 88 343.88171863067805 1028.623326492234 3 343.8815490603447 MULTI CID FTMS 0 0 0 8730 163300.828125 1.0 0 0.0 18 Unmodified _AQLIDKTKL_ REV__ENSG00000157578|ENST00000288350|LCA5L 7.289230182591677 0.6602208344931196 3 {I|L} 1 -1 13.099 0.0 0.0 1.2734 0.0 0.0 897.528262260592 0.0 897.528262260592 0.0 3.634993639681312 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2734 + + 80 + 1 1.476 44905.2 1.0 3527 5219 8730 HBL1_DMSO_200M_050219_1,8748 HBL1_DMSO_200M_050219_1,8748,AQLIDKTKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8749 45.962 800.0 438030.0 25 0 30304.0 -1 IVLVKMERWP 10 146 643.8656870820383 1285.7168212308766 2 643.8665649294853 MULTI CID FTMS 0 0 0 8730 114088.2109375 0.1745279652215948 -5 0.4337081909179687 19 Oxidation (M) _IVLVKM(Oxidation (M))ERWP_ ENSG00000083067|ENST00000677713|TRPM3;nc|ENSG00000083067|Q9HCF6-10|TRPM3;nc|ENSG00000083067|Q9HCF6-11|TRPM3;nc|ENSG00000083067|Q9HCF6-2|TRPM3;nc|ENSG00000083067|Q9HCF6-4|TRPM3;nc|ENSG00000083067|Q9HCF6-5|TRPM3;nc|ENSG00000083067|Q9HCF6-6|TRPM3;nc|ENSG00000083067|Q9HCF6-7|TRPM3;nc|ENSG00000083067|Q9HCF6-8|TRPM3;nc|ENSG00000083067|Q9HCF6|TRPM3 36.12702656103203 0.1984647928738587 3 {I|L}{I|L}VVY[WH][QT]K 10 -1 + 75.506 0.0 0.0 5.8727 5.8727 80.329 0.0 0.0 0.0 12.748513838711062 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 1.3807196863200843 1.6989700043360187 0.6549471895720984 1.031234684152075 {I|L}{I|L}VVY[WH][QT]K;{I|L}{I|L}VVY[WH][KT]Q;{I|L}{I|L}VVY[WH]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{I|L}{I|L}VVY[WK][HT]Q;{I|L}{I|L}VV{[TV]|[{I|L}S]}EETQR;{I|L}{I|L}[{I|L}P]YPWTQR;{I|L}{I|L}VVY[KG][KG][Y{M(Oxidation (M))|F}];{I|L}{I|L}VV{[TV]|[{I|L}S]}{[WN]|[YH]}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{I|L}{I|L}VV{[TV]|[{I|L}S]}EETRQ;{I|L}{I|L}VK{[QD]|[EN]|[WG]|[KD]|[RS]}WTQR 5.8727;5.6385;5.2552;5.1997;4.9863;4.7126;4.6565;4.6223;4.46;4.2295 -;-;-;-;-;-;-;-;-;- 2854 + 1 1.476 256239.1 0.9300000071525574 3528 5219 8730 HBL1_DMSO_200M_050219_1,8749 HBL1_DMSO_200M_050219_1,8749,IVLVKMERWP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8751 45.974 541.0 258120.0 25 0 15393.0 + 21089 LPAGPAPKV 9 164 425.2631289505345 848.511704967869 2 425.2633239626884 MULTI CID FTMS 0 0 0 8750 112627.8515625 0.0397325705211017 4 -0.3021697998046875 1 Unmodified _LPAGPAPKV_ ENSG00000254505|ENST00000347519|CHMP4A;nc|ENSG00000254505|Q9BY43-2|CHMP4A 32.30548876998284 0.1201446275138228 3 {I|L}PA[QP]PKV 8 2 + 53.704 0.0 0.0 6.3291 6.3291 79.027 0.0 0.0 0.0 39.72412334670576 6.932441950699761 6.932441950699761 1.3033376849500655 0 0.7742275032520141 1.5228787452803376 0.0 0.0 {I|L}PA[QP]PKV;{I|L}PAG[PA]PKV;{I|L}PQ[PA]PKV 6.3291;6.1755;5.4121 -;+;- + 220 + 1 1.492 108998.5 1.0 3529 5220 8750 HBL1_DMSO_200M_050219_1,8751 HBL1_DMSO_200M_050219_1,8751,LPAGPAPKV True True LPAGPAPKV 45.974401 425.263323962688 26632762.0 8750.0 ENSG00000254505|ENST00000347519|CHMP4A;;nc|ENSG00000254505|Q9BY43-2|CHMP4A 4.9471432367960615 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8752 45.976 63.0 802460.0 25 0 88769.0 + 20797 LLVVYPWTQR 10 49 637.8665177237659 1273.7184825143318 2 637.8668701052666 MULTI CID FTMS 0 0 0 8750 1490164.0 0.7656421720676178 -4 0.3338851928710937 2 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 34.93206674587334 0.2110832994570416 3 {I|L}{I|L}VVYP 6 4 59.654 0.0 0.0 4.6834 0.0 0.0 0.0 586.2722262018186 586.2722262018186 41.49288766643714 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.0 0.0 + {I|L}{I|L}VVYP 4.6834 + + 59 + 1 1.492 44566.1 1.0 3530 5220 8750 HBL1_DMSO_200M_050219_1,8752 HBL1_DMSO_200M_050219_1,8752,LLVVYPWTQR False True LLVVYPWTQR 45.975959 637.866870105267 165174860.0 8750.0 ENSG00000223609|ENST00000650601|HBD;;Q3SX09;;P02070;;ENSG00000244734|ENST00000335295|HBB;;ENSG00000196565|ENST00000336906|HBG2;;ENSG00000213931|ENST00000396895|HBE1;;ENSG00000213934|ENST00000330597|HBG1;;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 10.86994171142578 2.0 True 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8753 45.985 522.0 251460.0 25 0 20405.0 -1 0 144 600.0004067514204 1796.9793908544611 3 600.3347656130791 MULTI CID FTMS 0 0 0 8750 437147.71875 0.0420301205818387 7 -0.6112899780273438 3 3 [{I|L}V]KGA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K 17 -1 + 121.85 0.0 0.0 6.7809 6.7809 78.908 0.0 0.0 0.0 73.77224748023605 17.39542625657927 17.39542625657927 0.4635357103369273 0 2.180884548956689 2.0 0.3054621874040891 1.0044321917401078 [{I|L}V]KGA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]QK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]KK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]KQ{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]KGA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V][AG]K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]KK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V]QK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V]KGAE[YG]G{I|L}AH{I|L}DN{I|L}K;[{I|L}V]KQE[YG]G{I|L}AH{I|L}DN{I|L}K 6.7809;6.7551;6.7551;6.4066;6.2801;6.2535;6.2535;6.2535;6.0029;5.9772 -;-;-;-;-;-;-;-;-;- 15933 + 1 1.492 102118.3 1.0 3531 5220 8750 HBL1_DMSO_200M_050219_1,8753 HBL1_DMSO_200M_050219_1,8753, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8754 45.988 126.0 511180.0 25 0 48096.0 + 13973 HYVDSTTMY 9 94 558.7366652470786 1115.458777560957 2 558.7368041872978 MULTI CID FTMS 0 0 0 8750 374911.3125 0.4610493321119809 1 -0.1115951538085937 4 Unmodified _HYVDSTTMY_ ENSG00000106392|ENST00000436587|C1GALT1 48.345845343767074 0.0439967357579942 3 {[WN]|[YH]}VDSTTMY 9 0 + 56.225 0.0 0.0 5.0406 5.0406 86.862 0.0 0.0 0.0 15.969100130080562 7.944539621753535 7.944539621753535 15.969100130080562 0 0.7429928190999391 1.5228787452803376 0.8494850021680094 0.0 + + {[WN]|[YH]}VDSTTMY;{[DA]|[EG]}{[NV]|[RG]}DSTTMY;[QA]MTWWMY;[VG]{[QD]|[EN]|[WG]|[KD]|[RS]}DSTTMY;[QA][WE]STTMY;[QA]M[RD][W{M(Oxidation (M))|F}]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}HMY;[QA][DV]TS[W{M(Oxidation (M))|F}]Y;[QA]MT[YQ][{M(Oxidation (M))|F}E]V 5.0406;3.6089;3.1975;3.0092;2.649;2.3656;2.1943;1.9584;1.6896 +;-;-;-;-;-;-;-;- + 213 1 1.492 56553.9 1.0 3532 5220 8750 HBL1_DMSO_200M_050219_1,8754 HBL1_DMSO_200M_050219_1,8754,HYVDSTTMY True True HYVDSTTMY 45.987753 558.737 2806638.25 8750.0 ENSG00000106392|ENST00000436587|C1GALT1 7.135341962178548 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8755 46.001 784.0 137910.0 25 0 7382.8 -1 0 120 835.4492091868476 1668.8838654404951 2 835.4500610232353 MULTI CID FTMS 0 0 0 8750 261863.328125 0.0240751315606565 8 -0.6953659057617188 5 3 V{I|L}Q{M(Oxidation (M))|F}SD{[VA]|[{I|L}G]}AH{I|L}DN{I|L}K 15 -1 + 116.82 0.0 0.0 6.9998 6.9998 62.089 0.0 0.0 0.0 93.6308068002549 14.42792729599742 14.42792729599742 0.0 0 1.579689690656103 2.0 0.805462187404089 0.6237125054200234 V{I|L}Q{M(Oxidation (M))|F}SD{[VA]|[{I|L}G]}AH{I|L}DN{I|L}K;V{I|L}K{M(Oxidation (M))|F}SD{[VA]|[{I|L}G]}AH{I|L}DN{I|L}K;V{I|L}Q{M(Oxidation (M))|F}SD[Q{I|L}]H{I|L}DN{I|L}K;V{I|L}K{M(Oxidation (M))|F}SD[Q{I|L}]H{I|L}DN{I|L}K;V{I|L}Q{M(Oxidation (M))|F}SD{[VA]|[{I|L}G]}AH{I|L}DGG{I|L}K;V{I|L}[AG]{M(Oxidation (M))|F}SD{[VA]|[{I|L}G]}AH{I|L}DN{I|L}K;V{I|L}K{M(Oxidation (M))|F}SD{[VA]|[{I|L}G]}AH{I|L}DGG{I|L}K;V{I|L}Q{M(Oxidation (M))|F}S{[RE]|[WV]}AH{I|L}DN{I|L}K;V{I|L}K{M(Oxidation (M))|F}SD[Q{I|L}]H{I|L}DGG{I|L}K;V{I|L}[AG]{M(Oxidation (M))|F}SD[Q{I|L}]H{I|L}DN{I|L}K 6.9998;6.9998;6.7793;6.7793;6.4587;6.4587;6.4587;6.4159;6.237;6.237 -;-;-;-;-;-;-;-;-;- 6107 + 1 1.492 76710.9 1.0 3533 5220 8750 HBL1_DMSO_200M_050219_1,8755 HBL1_DMSO_200M_050219_1,8755, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8756 46.003 92.0 986470.0 25 0 148430.0 + 24189 LYYSSSRKVTY 11 98 456.2384783664445 1365.6936056995337 3 456.2384521365166 MULTI CID FTMS 0 0 0 8750 232929.171875 0.2706899062538359 -1 0.0699272155761718 6 Unmodified _LYYSSSRKVTY_ ENST00000453465.1_1_10:21915067-21915193:-|nuORF;ENST00000478691.5_1_1:23664326-23665089:-|nuORF;ENST00000490652.1_1_1:23664981-23665089:-|nuORF 32.037481411007896 0.3399527776090619 3 {I|L}YYSS 5 6 66.955 0.0 0.0 4.9027 0.0 0.0 0.0 749.3924727830668 749.3924727830668 40.96930422930234 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.8494850021680094 0.0 + {I|L}YYSS 4.9027 + + 384 + 1 1.492 81942.9 1.0 3534 5220 8750 HBL1_DMSO_200M_050219_1,8756 HBL1_DMSO_200M_050219_1,8756,LYYSSSRKVTY False True LYYSSSRKVTY 46.003355 456.238452136517 5768184.75 8750.0 ENST00000478691.5_1_1:23664326-23665089:-|nuORF;;ENST00000453465.1_1_10:21915067-21915193:-|nuORF;;ENST00000490652.1_1_1:23664981-23665089:-|nuORF 9.16661516825358 3.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8757 46.017 800.0 440870.0 25 0 17439.0 -1 CTQWYRFAEIR 11 231 510.5828989486981 1528.7268674462944 3 510.5830261111259 MULTI CID FTMS 0 0 0 8750 176580.953125 0.0077208588831985 6 -0.5198974609375 7 Carbamidomethyl (C) _C(Carbamidomethyl (C))TQWYRFAEIR_ ENSG00000060339|ENST00000265872|CCAR1;nc|ENSG00000060339|Q8IX12-2|CCAR1 2.92636267094166 0.8613411656971933 3 [HQ]VAWYGAEA{I|L}ER 13 -1 [HQ]V + + 102.14 1.1709 0.32151 6.6814 6.6814 61.191 0.0 0.0 0.0 0.0 77.61057592191344 0.0 0.0 0 2.9802046884880937 0.0 0.9802046884880936 0.6952349168877847 [HQ]VAWYGAEA{I|L}ER 6.6814 - 37293 + 1 1.492 268830.0 0.959999978542328 3535 5220 8750 HBL1_DMSO_200M_050219_1,8757 HBL1_DMSO_200M_050219_1,8757,CTQWYRFAEIR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8758 46.031 800.0 376810.0 25 0 27149.0 -1 VMSSQMKM 8 246 319.8108007303741 956.4105727913224 3 319.8104431033134 MULTI CID FTMS 0 0 0 8750 166160.296875 0.2912314094599648 6 -0.5198974609375 8 Oxidation (M) _VMSSQM(Oxidation (M))KM_ CHMP2B|p.N93S|1|0.17|ENSG00000083937|chr3:87245865-87245865|A/G|missense_variant 6.2057823575117 0.7866635192979977 3 MVP 3 -1 26.198 0.0 0.0 2.7392 0.0 0.0 0.0 626.2255825090912 626.2255825090912 16.286443222846067 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MVP 2.7392 - 211 + 1 1.492 242965.4 0.7300000190734863 3536 5220 8750 HBL1_DMSO_200M_050219_1,8758 HBL1_DMSO_200M_050219_1,8758,VMSSQMKM False False False False variant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8759 46.046 800.0 255960.0 25 0 25993.0 + 33910 SLFTNPEIGTN 11 179 596.7948417879106 1191.5751306426212 2 596.7957031130791 MULTI CID FTMS 0 0 0 8750 137897.0 0.5051426582840711 -1 0.0699272155761718 9 Unmodified _SLFTNPEIGTN_ REV__nc|ENSG00000158296|Q8WWT9-2|SLC13A3 19.361941925380144 0.6323962752489956 3 {[TV]|[{I|L}S]}QAPYE{[TV]|[{I|L}S]}AN 11 -1 + 45.544 0.0 0.0 3.8222 3.8222 74.175 0.0 0.0 0.0 8.016200911860366 1.4091791896718604 1.4091791896718604 3.1037800408849705 0 0.5 1.2218487496163564 1.359724654087736 0.5 {[TV]|[{I|L}S]}QAPYE{[TV]|[{I|L}S]}AN;{[TV]|[{I|L}S]}Q[EP]S{M(Oxidation (M))|F}{[TV]|[{I|L}S]}AN;{[TV]|[{I|L}S]}Q[EP]ST[{M(Oxidation (M))|F}V]AN;{[TV]|[{I|L}S]}[AG]APYE{[TV]|[{I|L}S]}AN;[VS]{[NV]|[RG]}PYE{[TV]|[{I|L}S]}AN;{[TV]|[{I|L}S]}QAPV{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]AN;{[TV]|[{I|L}S]}Q[HM]R[HV]AN;{[TV]|[{I|L}S]}QAPYEG[{I|L}T]N;{[TV]|[{I|L}S]}Q{[QS]|[NT]}AQ[{M(Oxidation (M))|F}V]AN;[HS]{M(Oxidation (M))|F}A[KA]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}AN 3.8222;3.5617;2.8895;2.6365;2.6134;2.5545;2.5212;2.4595;2.4526;2.3626 -;-;-;-;-;-;-;-;-;- 4425 1 1.492 149559.0 0.8899999856948853 3537 5220 8750 HBL1_DMSO_200M_050219_1,8759 HBL1_DMSO_200M_050219_1,8759,SLFTNPEIGTN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8760 46.06 800.0 271310.0 25 0 32916.0 + 45905 YYSYSQISH 9 189 574.2558641904311 1146.497175447662 2 574.2574951052666 MULTI CID FTMS 0 0 0 8750 121821.5703125 0.5228705292315241 -1 0.0699272155761718 10 Unmodified _YYSYSQISH_ ENSG00000100109|ENST00000407690|TFIP11 62.57269311338072 0.0246576765497938 3 YYSY{[QS]|[NT]}{I|L}SH 9 0 + 75.459 0.0 0.0 6.5817 6.5817 92.664 0.0 0.0 0.0 40.0182400004735 14.973024840566469 14.973024840566469 22.17441377540426 0 0.805462187404089 2.0 1.0114393726401687 0.0 + + YYSY{[QS]|[NT]}{I|L}SH;NPDSY{[QS]|[NT]}{I|L}SH;YY[YT][NS]{I|L}SH;YYSY{[QS]|[NT]}[HS]{I|L};YY[YT][WK]SH;YYSY{[WT]|[RM]}P[PA];YYSY{[QS]|[NT]}[HT]V;YYS[HM]HV[NP];YYS[HM]HNPV;YYS[HM][YQ]R 6.5817;4.6476;4.5052;4.3623;4.3563;4.3554;4.1145;4.0109;3.9153;3.4206 +;-;-;-;-;-;-;-;-;- + 2139 + 1 1.492 162241.4 0.7400000095367432 3538 5220 8750 HBL1_DMSO_200M_050219_1,8760 HBL1_DMSO_200M_050219_1,8760,YYSYSQISH True True YYSYSQISH 46.05983 574.257495105267 1247044.875 8750.0 ENSG00000100109|ENST00000407690|TFIP11 3.835758129755656 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8761 46.074 800.0 56163.0 25 0 6217.7 -1 LLVYYMIRFI 10 94 673.8829717539721 0 673.8824951052666 PEAK CID FTMS 0 0 0 8750 106849.40625 0.6796736069615248 -5 0.4343376159667969 11 Oxidation (M) _LLVYYM(Oxidation (M))IRFI_ ENSG00000047597|ENST00000378616|XK 7.289230182591677 0.3953776778296116 3 VYC 3 -1 15.177 0.0 0.0 1.1278 0.0 0.0 325.2410889163441 652.3596895807249 977.6007784970692 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 VYC 1.1278 - 97 + 1 1.492 40436.6 0.699999988079071 3539 5220 8750 HBL1_DMSO_200M_050219_1,8761 HBL1_DMSO_200M_050219_1,8761,LLVYYMIRFI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8763 46.078 2.2 18627000.0 25 0 2001100.0 + 24957 MPPPPPQGV 9 65 460.2385793050109 918.462605676822 2 460.2391540408134 MULTI CID FTMS 0 0 0 8762 27629506.0 0.9178198694313946 -2 0.1815223693847656 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 3 [VG]EHP 5 8 27.039 0.0 0.0 2.944 0.0 0.0 0.0 396.18774689063406 396.18774689063406 12.090606190045108 0.0 0.0 0.0 0 0.6861818737241735 1.6989700043360187 0.0 0.0 [VG]EHP 2.944 - 140 1 1.49 39865.8 1.0 3540 5221 8762 HBL1_DMSO_200M_050219_1,8763 HBL1_DMSO_200M_050219_1,8763,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8764 46.079 2.8 16859000.0 25 0 2529900.0 + 2180 AQAPDLQRV 9 62 499.274774576537 996.534996219874 2 499.2751342654228 MULTI CID FTMS 0 0 0 8762 26423842.0 0.349359202851245 -3 0.2465553283691406 2 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 39.94969957227396 0.0757326808254658 3 [QA]APD{I|L} 6 3 46.375 0.0 0.0 4.6536 0.0 0.0 0.0 398.21503626041255 398.21503626041255 33.610965409199345 0.0 0.0 0.0 0 1.0 0.7958800173440752 0.0 0.0 + [QA]APD{I|L} 4.6536 + + 27 + 1 1.49 41444.5 1.0 3541 5221 8762 HBL1_DMSO_200M_050219_1,8764 HBL1_DMSO_200M_050219_1,8764,AQAPDLQRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8765 46.08 30.0 1099000.0 25 0 63159.0 + 42143 VRYTFFVI 8 66 522.798158913099 0 522.7955200076103 PEAK CID FTMS 0 0 0 8762 1784570.25 1.0 0 0.0 3 Unmodified _VRYTFFVI_ REV__ENST00000379774.4_1_17:10608340-10608511:+|nuORF 16.942295170755138 0.4635191396245973 3 VKY 3 -1 20.604 0.0 0.0 1.9744 0.0 0.0 131.0947176291291 519.2339571588499 650.328674787979 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.4247425010840047 VKY 1.9744 - 28 + 1 1.49 34204.8 1.0 3542 5221 8762 HBL1_DMSO_200M_050219_1,8765 HBL1_DMSO_200M_050219_1,8765,VRYTFFVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8766 46.081 38.0 1121100.0 25 0 89055.0 + 44490 YPARAPSVV 9 81 480.26938060268174 958.5242082721636 2 480.2689086794853 MULTI CID FTMS 0 0 0 8762 1166394.125 0.4154840637246193 -2 0.1815223693847656 4 Unmodified _YPARAPSVV_ ENSG00000197321|ENST00000355867|SVIL;ENST00000422642.6_2_10:30987145-31001569:+|nuORF;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL 32.037481411007896 0.1235546156350648 3 YP 2 7 31.013 0.0 0.0 3.2355 0.0 0.0 0.0 695.3828829400999 695.3828829400999 2.196304488753018 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.0 0.0 + YP 3.2355 + + 73 + 1 1.49 39360.8 1.0 3543 5221 8762 HBL1_DMSO_200M_050219_1,8766 HBL1_DMSO_200M_050219_1,8766,YPARAPSVV True True YPARAPSVV 46.081446 480.268908679485 47707276.0 8762.0 ENST00000422642.6_2_10:30987145-31001569:+|nuORF;;nc|ENSG00000197321|O95425-3|SVIL;;nc|ENSG00000197321|O95425-2|SVIL;;nc|ENSG00000197321|O95425-4|SVIL;;ENSG00000197321|ENST00000355867|SVIL 2.9061822096506758 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8767 46.083 33.0 879880.0 25 0 79319.0 + 24857 MPMGPGHASV 10 71 492.2254187757413 982.4362846182828 2 492.2255432009697 MULTI CID FTMS 0 0 0 8762 912154.8125 0.5035975301684537 -2 0.1815223693847656 5 Unmodified _MPMGPGHASV_ ENSG00000161021|ENST00000292599|MAML1 19.256988751693697 0.5244284437930726 3 MPMT 4 7 37.435 0.0 0.0 3.8104 0.0 0.0 0.0 519.2412203424436 519.2412203424436 24.670802793795268 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 MPMT 3.8104 - 54 + 1 1.49 27756.1 1.0 3544 5221 8762 HBL1_DMSO_200M_050219_1,8767 HBL1_DMSO_200M_050219_1,8767,MPMGPGHASV False True MPMGPGHASV 46.082625 492.22554320097 12382079.0 8762.0 ENSG00000161021|ENST00000292599|MAML1 5.2435862223307295 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8768 46.084 39.0 878940.0 25 0 63157.0 + 30838 RILDESHSI 9 64 535.2856720239048 1068.5567911146095 2 535.2860595583916 MULTI CID FTMS 0 0 0 8762 876425.0 1.0 0 0.0 6 Unmodified _RILDESHSI_ ENSG00000100888|ENST00000646647|CHD8;ENST00000554384.1_1_14:21876861-21881122:-|nuORF;nc|ENSG00000100888|Q9HCK8-2|CHD8 24.99096001346401 0.2132109383330889 3 ESHS{I|L} 5 4 54.196 0.0 0.0 5.0719 0.0 0.0 497.29673964668126 0.0 497.29673964668126 0.0 48.1651564221918 0.0 0.0 0 0.7742275032520141 0.0 0.8494850021680094 0.0 + ESHS{I|L} 5.0719 + + 56 1 1.49 36385.0 1.0 3545 5221 8762 HBL1_DMSO_200M_050219_1,8768 HBL1_DMSO_200M_050219_1,8768,RILDESHSI False True RILDESHSI 46.083805 535.286059558392 5070908.5 8762.0 ENST00000554384.1_1_14:21876861-21881122:-|nuORF;;nc|ENSG00000100888|Q9HCK8-2|CHD8;;ENSG00000100888|ENST00000646647|CHD8 3.375556310017904 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8769 46.085 34.0 1583300.0 25 0 102900.0 43664 YARQGQIEV 9 82 532.2803377326778 1062.5461225321556 2 532.2792846560478 MULTI CID FTMS 0 0 0 8762 851100.25 0.1304580730929805 -3 0.2465553283691406 7 Unmodified _YARQGQIEV_ ENSG00000064393|ENST00000406875|HIPK2;ENSG00000110422|ENST00000303296|HIPK3;ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2;nc|ENSG00000110422|Q9H422-2|HIPK3;nc|ENSG00000163349|Q86Z02-2|HIPK1 19.256988751693697 0.3154191944385105 3 HH{I|L}ER[Q{I|L}]M 8 7 + 31.19 0.0 0.0 2.9354 2.9354 68.708 0.0 0.0 0.0 1.2229052669007423 1.1932554326627027 1.1932554326627027 1.1932554326627027 0 0.0 0.958607314841775 0.0 0.0 HH{I|L}ER[Q{I|L}]M;HH{I|L}ER{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{NN|[MP]|[D{I|L}]|[EV]}T[KQ][KC]EV;HH{I|L}ERAAVM;HH{I|L}ERAAMV;{NN|[MP]|[D{I|L}]|[EV]}T[KQ]ET[KT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RR[RN]EV;{NN|[MP]|[D{I|L}]|[EV]}T[KQ]E[KC]V;{[QN]|[E{I|L}]|[KN]}S[KQ][KC]EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RRE{I|L}QQ 2.9354;2.8231;2.8203;2.8127;2.7004;2.6698;2.6006;2.5948;2.4939;2.4926 -;-;-;-;-;-;-;-;-;- 409 + 1 1.49 51841.8 1.0 3546 5221 8762 HBL1_DMSO_200M_050219_1,8769 HBL1_DMSO_200M_050219_1,8769,YARQGQIEV False True KQTEVETVM 46.084982 532.279284656048 4994596.5 8762.0 ENSG00000112578|ENST00000230340|BYSL 0.1395132690668106 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8770 46.086 54.0 1679800.0 25 0 100530.0 + 39263 VAAPQVQQV 9 104 470.2669044135837 938.5192558939674 2 470.2677490115166 MULTI CID FTMS 0 0 0 8762 815853.8125 0.6246784047747458 -1 0.1115951538085937 8 Unmodified _VAAPQVQQV_ ENSG00000198911|ENST00000361204|SREBF2;nc|ENSG00000198911|Q12772-2|SREBF2 30.22481116460888 0.1466181017706357 3 {[VA]|[{I|L}G]}GPQYPP 8 5 37.344 0.0 0.0 3.9791 0.0 0.0 0.0 126.09100817351738 126.09100817351738 20.18569080323629 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[VA]|[{I|L}G]}GPQYPP 3.9791 - 1657 1 1.49 75277.4 1.0 3547 5221 8762 HBL1_DMSO_200M_050219_1,8770 HBL1_DMSO_200M_050219_1,8770,VAAPQVQQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8771 46.089 145.0 632250.0 25 0 37486.0 + 3005 AVIREIQNA 9 152 507.29059681576007 1012.5666406983202 2 507.2900268435478 MULTI CID FTMS 0 0 0 8762 614413.9375 0.1437771601683118 2 -0.1288070678710937 9 Unmodified _AVIREIQNA_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19762333-19763700:-|nuORF;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 49.55428908609986 0.0413471690215031 3 {[VA]|[{I|L}G]}{I|L}RE{I|L}QNA 9 0 + 45.714 0.0 0.0 4.5146 4.5146 82.753 0.0 0.0 0.0 20.445560790365768 21.28891713146109 20.445560790365768 9.208187539523747 0 1.337180496500464 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}{I|L}RE{I|L}QNA;{[VA]|[{I|L}G]}{I|L}RE{I|L}[AG]NA;{[VA]|[{I|L}G]}{I|L}REA{[VA]|[{I|L}G]}NA;{[VA]|[{I|L}G]}GKK[TP]QNA;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QNA;{[VA]|[{I|L}G]}{I|L}RTA[TP]NA;{[VA]|[{I|L}G]}GKKQ[TP]NA;{[VA]|[{I|L}G]}GKKGA[TP]NA;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]NA;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}A{[VA]|[{I|L}G]}NA 4.5146;3.6052;3.1101;2.6063;2.3165;1.8704;1.6399;1.5209;1.4072;0.91202 +;-;-;-;-;-;-;-;-;- + 664 1 1.49 75520.1 1.0 3548 5221 8762 HBL1_DMSO_200M_050219_1,8771 HBL1_DMSO_200M_050219_1,8771,AVIREIQNA True True AVIREIQNA 46.089257 507.290026843548 30063426.0 8762.0 nc|ENSG00000105726|Q9HD20-2|ATP13A1;;ENSG00000105726|ENST00000357324|ATP13A1;;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;;ENST00000469641.5_1_19:19762333-19763700:-|nuORF 5.466566244761149 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8772 46.092 109.0 662890.0 25 0 81216.0 + -1 GEVLCDSVM 9 85 513.2167295470742 1024.4189061609484 2 513.2175781130791 MULTI CID FTMS 0 0 0 8762 593513.5 0.893871883285729 -5 0.4454803466796875 10 Carbamidomethyl (C),Oxidation (M) _GEVLC(Carbamidomethyl (C))DSVM(Oxidation (M))_ REV__nc|ENSG00000186153|Q9NZC7-2|WWOX 21.74664581756881 0.2544899275067181 3 STT{I|L}{[RE]|[WV]} 6 -1 33.689 0.0 0.0 3.2886 0.0 0.0 319.06645686797657 0.0 319.06645686797657 0.0 1.2422095002850142 0.0 0.0 0 0.0 0.0 1.305462187404089 0.0 STT{I|L}{[RE]|[WV]} 3.2886 - 69 1 1.49 61308.4 1.0 3549 5221 8762 HBL1_DMSO_200M_050219_1,8772 HBL1_DMSO_200M_050219_1,8772,GEVLCDSVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8773 46.094 142.0 1058200.0 25 0 85369.0 3232 AWPWVVSLQ 9 141 543.2906565684075 1084.5667602036149 2 543.2906371951103 MULTI CID FTMS 0 0 0 8762 509245.90625 0.2453319264070567 -8 0.6627349853515625 11 Unmodified _AWPWVVSLQ_ ENSG00000186452|ENST00000398458|TMPRSS12 19.256988751693697 0.3154191944385105 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PERPTTK 9 6 + 64.177 0.0 0.0 5.9173 5.9173 90.427 0.0 0.0 0.0 41.50080166850296 11.829678198600796 11.829678198600796 20.40166453969948 0 0.3807196863200844 1.6989700043360187 0.5451140161145328 0.6237125054200235 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PERPTTK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}H{[VA]|[{I|L}G]}C(Carbamidomethyl (C))TK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}H[QT]TTK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[TA]H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}K;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}H{[VA]|[{I|L}G]}[CG]TK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}H{[VA]|[{I|L}G]}{[QG]|[NA]}{[CT]|[{M(Oxidation (M))|F}G]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}H[TA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}K;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}H{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}E]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WH]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P[Y{I|L}][WH]{I|L} 5.9173;4.0362;3.7545;3.32;3.1872;3.1451;2.6374;2.3064;1.7432;1.1434 -;-;-;-;-;-;-;-;-;- 701 + 1 1.49 115124.6 1.0 3550 5221 8762 HBL1_DMSO_200M_050219_1,8773 HBL1_DMSO_200M_050219_1,8773,AWPWVVSLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8774 46.098 165.0 628940.0 25 0 91312.0 + 33365 SGIPEKDLHSV 11 98 591.3119765429576 1180.6094001527151 2 591.3118774294853 MULTI CID FTMS 0 0 0 8762 427332.8125 0.7605106090469432 -1 0.1115951538085937 12 Unmodified _SGIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 45.003709309572464 0.1452994595971619 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{I|L}HSVAW 10 7 + 69.418 0.0 0.0 5.8798 5.8798 79.272 0.0 0.0 0.0 2.3470426656586056 2.3470426656586056 2.3470426656586056 2.3470426656586056 0 1.3807196863200843 0.0 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{I|L}HSVAW;{[CT]|[{M(Oxidation (M))|F}G]}AVSHQ{I|L}H[VS];[EP]KD{I|L}HSVA[VS];{[CT]|[{M(Oxidation (M))|F}G]}AVSH[AG]{I|L}H[VS];{[CT]|[{M(Oxidation (M))|F}G]}AVSH{I|L}QH[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HVPESVAW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WHQ{I|L}H[VS];[TP][KQ]QHSVAW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HVEPSVAW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P[HV]ESVAW 5.8798;5.681;5.6091;4.9078;4.8075;4.7103;4.6982;4.6741;4.5612;4.5466 -;-;-;-;-;-;-;-;-;- 2072 1 1.49 80653.0 1.0 3551 5221 8762 HBL1_DMSO_200M_050219_1,8774 HBL1_DMSO_200M_050219_1,8774,SGIPEKDLHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8775 46.101 197.0 421060.0 25 0 23908.0 + 32000 RVIDHSQYL 9 93 565.8013866297696 1129.588220326339 2 565.8014404177666 MULTI CID FTMS 0 0 0 8762 335081.65625 0.992700062945177 -1 0.1115951538085937 13 Unmodified _RVIDHSQYL_ ENSG00000183826|ENST00000481247|BTBD9;nc|ENSG00000183826|Q96Q07-2|BTBD9;nc|ENSG00000183826|Q96Q07-3|BTBD9 31.26834338654808 0.1333407332142048 3 DHSQY{I|L} 6 3 58.761 0.0 0.0 5.202 0.0 0.0 368.2537403791032 0.0 368.2537403791032 0.0 50.688812894078126 0.0 0.0 0 0.7614393726401688 0.0 0.8494850021680094 0.0 + DHSQY{I|L} 5.202 + + 182 1 1.49 65547.7 1.0 3552 5221 8762 HBL1_DMSO_200M_050219_1,8775 HBL1_DMSO_200M_050219_1,8775,RVIDHSQYL False True RVIDHSQYL 46.101452 565.801440417767 2103530.75 8762.0 ENSG00000183826|ENST00000481247|BTBD9;;nc|ENSG00000183826|Q96Q07-2|BTBD9;;nc|ENSG00000183826|Q96Q07-3|BTBD9 7.488623142242432 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8776 46.105 197.0 196290.0 25 0 23248.0 + 264 ADDEEDSHIS 10 80 559.2175560873418 1116.4205592414835 2 559.2176391482353 MULTI CID FTMS 0 0 0 8762 289041.84375 1.0 0 0.0 14 Unmodified _ADDEEDSHIS_ REV__ENSG00000104093|ENST00000560891|DMXL2;REV__ENST00000561079.1_1_15:51755569-51758496:-|nuORF;REV__nc|ENSG00000104093|Q8TDJ6-2|DMXL2;REV__nc|ENSG00000104093|Q8TDJ6-3|DMXL2;REV__nc|ENSG00000104093|Q8TDJ6|DMXL2 6.723162845929126 0.6955379296933136 3 {[DA]|[EG]}Y 3 -1 19.666 0.0 0.0 1.7615 0.0 0.0 0.0 764.2687397436897 764.2687397436897 -0.0269751594335296 0.0 -0.0269751594335296 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}Y 1.7615 - 35 1 1.49 35617.4 1.0 3553 5221 8762 HBL1_DMSO_200M_050219_1,8776 HBL1_DMSO_200M_050219_1,8776,ADDEEDSHIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8777 46.111 337.0 262710.0 25 0 29193.0 + 5681 DPHSFPRTV 9 124 352.51388526126686 1054.519826384001 3 352.5136596560478 MULTI CID FTMS 0 0 0 8762 282720.125 0.0700429295184662 7 -0.583770751953125 15 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 8.745405648335112 0.6093864874670651 3 V 1 8 8.9794 0.0 0.0 0.85152 0.0 0.0 937.440150641128 0.0 937.440150641128 0.0 -2.85251508748458 -2.85251508748458 0.0 0 0.0 0.0 0.0 0.0 + V 0.85152 + + 65 + 1 1.49 76985.9 1.0 3554 5221 8762 HBL1_DMSO_200M_050219_1,8777 HBL1_DMSO_200M_050219_1,8777,DPHSFPRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8778 46.117 290.0 383680.0 25 0 21954.0 + + 33214 SFLSGGREI 9 139 483.2546395848205 0 483.2545959353447 PEAK CID FTMS 0 0 0 8762 220704.515625 1.0 0 0.0 16 Unmodified _SFLNTERV_ nc|ENSG00000164050|O43157-2|PLXNB1;ENSG00000164050|ENST00000296440|PLXNB1 15.847184025352805 0.4758297917908462 3 {I|L}S 2 -1 15.529 0.0 0.0 1.6101 0.0 0.0 234.0954347898628 527.2590008952468 761.3544356851096 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {I|L}S 1.6101 - 199 + 1 1.49 89560.3 1.0 3555 5221 8762 HBL1_DMSO_200M_050219_1,8778 HBL1_DMSO_200M_050219_1,8778,SFLNTERV False False SFLSGGREI 46.116636 483.254595935345 1706453.375 8762.0 nc|ENSG00000164050|O43157-2|PLXNB1;;ENSG00000164050|ENST00000296440|PLXNB1 -0.5405689179897308 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8779 46.128 634.0 310710.0 25 0 27721.0 -1 SFAMAGTECL 10 177 551.731594290596 1101.448635647992 2 551.7295410037041 MULTI CID FTMS 0 0 0 8762 203512.328125 1.0 0 0.0 17 Carbamidomethyl (C),Oxidation (M) _SFAM(Oxidation (M))AGTEC(Carbamidomethyl (C))L_ ENSG00000278889|ENST00000341959|OR2S2 10.823927491677226 0.6659270209832991 3 {I|L}S{M(Oxidation (M))|F}PTTK 7 -1 48.763 0.0 0.0 4.4272 0.0 0.0 309.00874152732405 0.0 309.00874152732405 0.0 21.19274177296353 0.0 0.0 0 0.0 0.0 1.8324385367314688 0.2215141619232908 {I|L}S{M(Oxidation (M))|F}PTTK 4.4272 - 1879 + 1 1.49 153509.7 1.0 3556 5221 8762 HBL1_DMSO_200M_050219_1,8779 HBL1_DMSO_200M_050219_1,8779,SFAMAGTECL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8780 46.141 771.0 80558.0 25 0 7001.7 + + 38365 TQWVGPTNGNGNA 13 127 658.3060819260013 0 658.3057739138603 PEAK CID FTMS 0 0 0 8762 134818.046875 1.0 0 0.0 18 Unmodified _TQREKMQEEH_ ENSG00000100908|ENST00000216799|EMC9;ENST00000558045.2_1_14:24608221-24608440:-|nuORF 12.240655878213236 0.3578162629684178 3 GVWE 4 -1 28.63 0.0 0.0 2.1778 0.0 0.0 743.3227218580588 97.04143701724844 840.3641588753072 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.2215141619232908 0.0 GVWE 2.1778 - 380 + 1 1.49 53678.8 1.0 3557 5221 8762 HBL1_DMSO_200M_050219_1,8780 HBL1_DMSO_200M_050219_1,8780,TQREKMQEEH False False TQWVGPTNGNGNA 46.14105 658.30577391386 919800.0625 8762.0 ENSG00000100908|ENST00000216799|EMC9;;ENST00000558045.2_1_14:24608221-24608440:-|nuORF 6.206961631774902 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8781 46.154 718.0 387240.0 25 0 43084.0 + 22534 LPWHDGKQV 9 224 540.2864393594407 1078.5583257856813 2 540.2682372927666 MULTI CID FTMS 0 0 0 -1 0 19 Unmodified _LPWHDGKQV_ ENSG00000049656|ENST00000320895|CLPTM1L;nc|ENSG00000049656|Q96KA5-2|CLPTM1L 97.74103586103692 0.0118322510706281 3 {I|L}PV{M(Oxidation (M))|F}E{M(Oxidation (M))|F}TQV 9 5 + 66.886 0.0 0.0 6.2014 6.2014 77.862 0.0 0.0 0.0 18.09515533973996 5.172029955149348 5.172029955149348 0.876437115225869 0 1.110924374808178 1.3979400086720375 1.1496498648046138 1.0114393726401687 {I|L}PV{M(Oxidation (M))|F}E{M(Oxidation (M))|F}TQV;{I|L}PWH[QA]TQV;{I|L}PWHDGKQV;{I|L}PV{M(Oxidation (M))|F}E{M(Oxidation (M))|F}TVQ;{I|L}PWH[QA]TVQ;{I|L}PWHDGKVQ;{I|L}PV{M(Oxidation (M))|F}E{M(Oxidation (M))|F}TN{I|L};{I|L}PWH[QA]TN{I|L};{I|L}PWHDGKN{I|L};{I|L}P{[DA]|[EG]}H[QA]TQV 6.2014;6.1202;6.0581;5.7219;5.6406;5.5786;5.4333;5.3521;5.29;5.2664 -;-;+;-;-;-;-;-;-;- + 13242 + 1 1.49 210031.1 1.0 3558 5221 8762 HBL1_DMSO_200M_050219_1,8781 HBL1_DMSO_200M_050219_1,8781,LPWHDGKQV True True LPWHDGKQV 46.153519 540.268237292767 1307526.625 8762.0 nc|ENSG00000049656|Q96KA5-2|CLPTM1L;;ENSG00000049656|ENST00000320895|CLPTM1L 6.028069019317627 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8782 46.169 800.0 370610.0 25 0 32124.0 + 15162 IPAPRGTGI 9 260 441.2636130866183 880.5126732400365 2 441.2635070681572 MULTI CID FTMS 0 0 0 8762 106522.9453125 0.3373436299282458 -2 0.1815223693847656 20 Unmodified _IPAPRGTGI_ ENSG00000140988|ENST00000343262|RPS2;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000434010.1_1_20:32710701-32710965:+|nuORF;ENST00000441047.1_1_17:51834352-51834658:-|nuORF;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF 36.12702656103203 0.0967173616627612 3 {I|L}PAP 4 5 57.027 0.0 0.0 6.4766 0.0 0.0 0.0 499.2664888971313 499.2664888971313 44.80835659879972 0.0 0.0 0.0 0 1.110924374808178 1.3979400086720375 0.0 0.0 + {I|L}PAP 6.4766 + + 704 + 1 1.49 228083.2 0.7799999713897705 3559 5221 8762 HBL1_DMSO_200M_050219_1,8782 HBL1_DMSO_200M_050219_1,8782,IPAPRGTGI True True IPAPRGTGI 46.168811 441.263507068157 2321075.0 8762.0 ENST00000397318.4_1_X:40794237-40794825:-|nuORF;;ENSG00000140988|ENST00000343262|RPS2;;ENST00000441047.1_1_17:51834352-51834658:-|nuORF;;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;;ENST00000443417.1_1_9:102879039-102879699:-|nuORF;;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;;ENST00000434010.1_1_20:32710701-32710965:+|nuORF 2.6089428265889487 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8784 46.173 4.3 8994800.0 25 0 684300.0 + 38879 TVKKTFFEDV 10 52 405.2193658408255 1212.6362681226765 3 405.2195922732353 MULTI CID FTMS 0 0 0 8783 9392793.0 0.4404888882552654 1 -0.0336990356445312 1 Unmodified _TVKKTFFEDV_ REV__ENSG00000079691|ENST00000329474|CARMIL1;REV__nc|ENSG00000079691|Q5VZK9-2|CARMIL1 13.042465956692816 0.6287021003332052 3 TV 2 -1 23.856 0.0 0.0 1.9673 0.0 0.0 994.5088094818548 0.0 994.5088094818548 0.0 13.169992671634796 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 TV 1.9673 + + 16 + 1 1.49 36538.9 1.0 3560 5222 8783 HBL1_DMSO_200M_050219_1,8784 HBL1_DMSO_200M_050219_1,8784,TVKKTFFEDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8785 46.174 19.0 1289900.0 25 0 84760.0 + 18518 KYQEVTNNL 9 62 554.7853453449497 1107.5561377566994 2 554.7858154177666 MULTI CID FTMS 0 0 0 8783 2046603.75 0.3730081119000414 1 -0.0336990356445312 2 Unmodified _KYQEVTNNL_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 19.361941925380144 0.3125782356748823 3 [YK]QEVTN{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 37.113 0.0 0.0 3.3509 3.3509 80.068 0.0 0.0 0.0 3.748162098249004 26.14393726401688 3.748162098249004 9.208187539523756 0 0.0 0.0 0.0 0.0 + + [YK]QEVTN{[QV]|[N{I|L}]|[RA]|[KV]};[YK][AG]EVTN{[QV]|[N{I|L}]|[RA]|[KV]};[YK]QEVTGG{[QV]|[N{I|L}]|[RA]|[KV]};[YK][AG]EVTGG{[QV]|[N{I|L}]|[RA]|[KV]};[YK]Q{[TV]|[{I|L}S]}EN{[QV]|[N{I|L}]|[RA]|[KV]};[YK][AG]{[TV]|[{I|L}S]}EN{[QV]|[N{I|L}]|[RA]|[KV]};[YK]Q{[TV]|[{I|L}S]}EGG{[QV]|[N{I|L}]|[RA]|[KV]} 3.3509;2.5195;2.5195;1.692;1.6579;0.82653;0.82653 +;-;-;-;-;-;- + 152 1 1.49 25199.9 1.0 3561 5222 8783 HBL1_DMSO_200M_050219_1,8785 HBL1_DMSO_200M_050219_1,8785,KYQEVTNNL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8786 46.175 11.0 4266700.0 25 0 978100.0 22985 LSGPLSVTGV 10 74 465.2685407305399 928.5225285278798 2 465.2686340212822 MULTI CID FTMS 0 0 0 8783 4849191.5 0.2338618543987007 -4 0.3416633605957031 3 Unmodified _LSGPLSVTGV_ ENST00000477438.1_1_22:44564113-44564555:+|nuORF 25.399314129420983 0.3980215340001851 3 [KP]VETVG{[TV]|[{I|L}S]} 9 8 + 44.715 0.0 0.0 4.8157 4.8157 87.773 0.0 0.0 0.0 2.04119982655925 27.725468765256167 2.04119982655925 44.71516880861636 0 0.3807196863200844 0.0 0.805462187404089 0.0 [KP]VETVG{[TV]|[{I|L}S]} 4.8157 - 122 1 1.49 43671.4 1.0 3562 5222 8783 HBL1_DMSO_200M_050219_1,8786 HBL1_DMSO_200M_050219_1,8786,LSGPLSVTGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8787 46.177 75.0 715510.0 25 0 66908.0 + 21558 LPKDPDVKV 9 85 505.7972680726174 1009.5799832120348 2 505.7971984744072 MULTI CID FTMS 0 0 0 8783 497395.875 0.6778422184458015 -6 0.54058837890625 4 Unmodified _LPKDPDVKV_ REV__ENSG00000103248|ENST00000360900|MTHFSD;REV__ENST00000562994.5_2_16:86580251-86585743:-|nuORF;REV__nc|ENSG00000103248|Q2M296-2|MTHFSD 14.838274106304384 0.4350285940865338 3 {I|L}P 2 -1 45.217 0.0 0.0 4.4787 0.0 0.0 0.0 796.4211791237504 796.4211791237504 19.837425177946457 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P 4.4787 + + 155 + 1 1.49 44128.1 1.0 3563 5222 8783 HBL1_DMSO_200M_050219_1,8787 HBL1_DMSO_200M_050219_1,8787,LPKDPDVKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8788 46.179 61.0 372840.0 25 0 31751.0 + 40495 VIRSTYFLD 9 54 557.302818269651 0 557.3033325076103 PEAK CID FTMS 0 0 0 8783 287784.96875 0.0065744203573601 11 -0.8808174133300781 5 Unmodified _VIRSTYFLD_ REV__ENSG00000076356|ENST00000367033|PLXNA2;REV__nc|ENSG00000076356|O75051-2|PLXNA2 10.073929032068715 0.3114232490637051 3 A 1 -1 6.9897 0.0 0.0 0.62824 0.0 0.0 303.1543293109831 735.3782442682249 1038.532573579208 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.62824 - 5 + 1 1.49 25265.2 1.0 3564 5222 8783 HBL1_DMSO_200M_050219_1,8788 HBL1_DMSO_200M_050219_1,8788,VIRSTYFLD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8789 46.19 665.0 193570.0 25 0 9910.6 -1 SSAGHSSSAML 11 200 525.7305691480717 1049.446585362943 2 525.7302734255791 MULTI CID FTMS 0 0 0 8783 167992.4375 0.7419228245456398 -2 0.2067031860351562 6 Oxidation (M) _SSAGHSSSAM(Oxidation (M))L_ ENSG00000156395|ENST00000369701|SORCS3 8.745405648335112 0.8338865417133445 3 [SG]GGT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{M(Oxidation (M))|F}{I|L} 10 -1 + 20.64 0.0 0.0 1.9667 1.9667 69.47 0.0 0.0 0.0 1.5887093670372785 2.833012287035494 1.5887093670372785 2.430380486862944 0 0.0 0.0 0.3807196863200844 0.0 [SG]GGT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{M(Oxidation (M))|F}{I|L};[SG]GTG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{M(Oxidation (M))|F}{I|L};[TP]A{[DS]|[MA]|[CV]|TT}YH{M(Oxidation (M))|F}{I|L};[SG]NT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{M(Oxidation (M))|F}{I|L};[SG]GRA[C(Carbamidomethyl (C))Q][WE];[TP]D{[SA]|[TG]}YH{M(Oxidation (M))|F}{I|L};[SG]GGT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{I|L}{M(Oxidation (M))|F};[SG]GKV[C(Carbamidomethyl (C))Q][WE];{[DA]|[EG]}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))Q]VDPV;[SG]GTG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{I|L}{M(Oxidation (M))|F} 1.9667;1.7352;1.723;1.723;1.371;1.3438;1.2613;1.2032;1.1138;1.0297 -;-;-;-;-;-;-;-;-;- 6054 + 1 1.49 104252.2 1.0 3565 5222 8783 HBL1_DMSO_200M_050219_1,8789 HBL1_DMSO_200M_050219_1,8789,SSAGHSSSAML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8790 46.203 709.0 306180.0 25 0 21128.0 + 37134 THHIIGSVI 9 210 488.7823434083903 975.5501338835808 2 488.7827941775322 MULTI CID FTMS 0 0 0 8783 151873.578125 0.1400124739029862 7 -0.5897293090820312 7 Unmodified _THHIIGSVI_ REV__ENSG00000150712|ENST00000382142|MTMR12;REV__nc|ENSG00000150712|Q9C0I1-2|MTMR12;REV__nc|ENSG00000150712|Q9C0I1-3|MTMR12 42.09456458481378 0.0639583784996157 3 WS{[VA]|[{I|L}G]}VS{I|L} 7 -1 33.994 0.0 0.0 3.4846 0.0 0.0 215.1357184556494 0.0 215.1357184556494 0.0 17.62865427808889 0.0 0.0 0 0.8494850021680094 0.0 1.4476212463643423 0.0 WS{[VA]|[{I|L}G]}VS{I|L} 3.4846 - 3821 + 1 1.49 164580.2 1.0 3566 5222 8783 HBL1_DMSO_200M_050219_1,8790 HBL1_DMSO_200M_050219_1,8790,THHIIGSVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8792 46.207 22.0 2590400.0 25 0 345100.0 + 24150 LYQPRASEM 9 65 547.7681740940407 1093.5217952548812 2 547.7687255740166 MULTI CID FTMS 0 0 0 8791 2675103.25 0.7925293144908244 1 -0.061767578125 1 Unmodified _LYQPRASEM_ ENSG00000168081|ENST00000301908|PNOC;nc|ENSG00000168081|Q13519-2|PNOC 34.40172386719151 0.1061884637610825 3 {I|L}YQMGP{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 9 6 + 70.384 0.0 0.0 6.4365 6.4365 83.831 0.0 0.0 0.0 52.17970232071082 7.77696854845523 7.77696854845523 4.247425010840047 0 0.6989700043360187 2.0 0.8494850021680094 0.3807196863200844 {I|L}YQMGP{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{I|L}YQPGM{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{I|L}YQMGP{I|L}AAM;{I|L}YQPGM{I|L}AAM;{I|L}Y[AG]MGP{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{I|L}Y[AG]PGM{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{I|L}YQAAQQ{[WS]|[C(Carbamidomethyl (C)){I|L}]};[Y{I|L}][{M(Oxidation (M))|F}V]{[YD]|[{M(Oxidation (M))|F}M]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[YV]Y[YT]{I|L}AAM;[YV]Y[YT]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 6.4365;6.0481;5.7064;5.7064;5.2462;4.8578;4.7008;1.9336;0.76001;0.71817 -;-;-;-;-;-;-;-;-;- 276 + 1 1.49 48576.8 1.0 3567 5223 8791 HBL1_DMSO_200M_050219_1,8792 HBL1_DMSO_200M_050219_1,8792,LYQPRASEM True True LYQPRASEM 46.206718 547.768725574017 43211356.0 8791.0 nc|ENSG00000168081|Q13519-2|PNOC;;ENSG00000168081|ENST00000301908|PNOC 6.684354782104492 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8793 46.208 21.0 2798900.0 25 0 247940.0 + 3218 AWPEKRGEI 9 64 362.529520375864 1084.566731727792 3 362.5293151736259 MULTI CID FTMS 0 0 0 8791 2277761.0 0.4030508381302389 -5 0.3753623962402344 2 Unmodified _AWPEKRGEI_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 22.736283301280096 0.2418982879461534 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE{I|L} 5 4 44.125 0.0 0.0 4.0684 0.0 0.0 0.0 485.24619470767817 485.24619470767817 32.134928107446186 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE{I|L} 4.0684 - 33 + 1 1.49 56075.9 1.0 3568 5223 8791 HBL1_DMSO_200M_050219_1,8793 HBL1_DMSO_200M_050219_1,8793,AWPEKRGEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8794 46.209 40.0 1267800.0 25 0 144630.0 + 33364 SGIPEKDLHSV 11 89 394.54352539613984 1180.6087467886196 3 394.5435363650322 MULTI CID FTMS 0 0 0 8791 1011491.5 0.8263702139032136 1 -0.061767578125 3 Unmodified _SGIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 30.354368406336206 0.3794727900792232 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEKD{I|L}HSV 10 3 + 40.442 0.0 0.0 3.4255 3.4255 82.451 0.0 0.0 0.0 8.32650597641134 6.645293596321125 6.645293596321125 17.74350030035414 0 0.2302046884880938 0.0 1.1307196863200843 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEKD{I|L}HSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PWW{I|L}HSV;[EP]K{[QS]|[NT]}K[HA]AW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{M(Oxidation (M))|F}[QP]{I|L}HSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[CA]|SS}[TP]{I|L}HSV;{[VA]|[{I|L}G]}[NG]{I|L}DK[HA]AW;[TP][KQ]DK[HA]AW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HA]KD{I|L}HSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[DG][TP]{I|L}HSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[CA]|SS}HV[W{I|L}]V 3.4255;1.9226;1.9129;1.8839;1.4447;1.3452;1.2982;1.2151;1.1822;1.0368 -;-;-;-;-;-;-;-;-;- 464 + 1 1.49 47090.8 1.0 3569 5223 8791 HBL1_DMSO_200M_050219_1,8794 HBL1_DMSO_200M_050219_1,8794,SGIPEKDLHSV False True SGIPEKDLHSV 46.209075 394.543536365032 27322443.0 8791.0 ENST00000606952.5_1_1:156203463-156206310:+|nuORF;;ENSG00000160783|ENST00000368277|PMF1;;nc|ENSG00000160783|Q6P1K2-2|PMF1;;nc|ENSG00000160783|Q6P1K2-4|PMF1 7.454620838165283 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8795 46.21 36.0 1673500.0 25 0 188330.0 + 36440 SYYNSHDSL 9 79 543.2303175918241 1084.4460822504482 2 543.2305786013603 MULTI CID FTMS 0 0 0 8791 851025.875 1.0 0 0.0 4 Unmodified _SYYNSHDSL_ ENSG00000134242|ENST00000359785|PTPN22;ENST00000484147.5_1_1:114375712-114414257:-|nuORF;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;nc|ENSG00000134242|Q9Y2R2-6|PTPN22;nc|ENSG00000134242|Q9Y2R2|PTPN22 18.1463463914782 0.3454829746528889 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WN]|[YH]}NY[MT] 8 8 + 29.644 0.0 0.0 2.7335 2.7335 79.033 0.0 0.0 0.0 7.90484985457369 18.384315473529185 7.90484985457369 9.262137858390815 0 0.3494850021680094 1.5228787452803376 0.3807196863200844 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WN]|[YH]}NY[MT];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WN]|[YH]}GGY[MT];[HS][{M(Oxidation (M))|F}V]SNY[MT];[EP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SNY[MT];{[{M(Oxidation (M))|F}C]|[YS]}YN{[CP]|[EA]}[EP]{I|L};[HS][{M(Oxidation (M))|F}V]SGGY[MT];[EP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SGGY[MT];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WN]|[YH]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[{M(Oxidation (M))|F}C]|[YS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[RE]|[WV]}[C(Carbamidomethyl (C))N]{[{M(Oxidation (M))|F}C]|[YS]} 2.7335;1.8795;1.5873;1.4063;1.3097;0.73819;0.55718;0.44637;0.24179 -;-;-;-;-;-;-;-;- 99 1 1.49 52564.2 1.0 3570 5223 8791 HBL1_DMSO_200M_050219_1,8795 HBL1_DMSO_200M_050219_1,8795,SYYNSHDSL False True SYYNSHDSL 46.210254 543.23057860136 11652117.0 8791.0 ENSG00000134242|ENST00000359785|PTPN22;;nc|ENSG00000134242|Q9Y2R2-6|PTPN22;;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;;nc|ENSG00000134242|Q9Y2R2|PTPN22;;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;;ENST00000484147.5_1_1:114375712-114414257:-|nuORF 5.590388456980388 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8796 46.212 51.0 1446100.0 25 0 213650.0 + 22217 LPRDFRQL 8 77 348.8694118174692 1043.5864060526076 3 348.8694946169853 MULTI CID FTMS 0 0 0 8791 899716.375 0.1911823297364496 -2 0.1288070678710937 5 Unmodified _LPRDFRQL_ REV__ENSG00000100726|ENST00000262319|TELO2 13.50788311687929 0.7113601687236069 3 {I|L}VPQ 4 -1 36.186 0.0 0.0 3.4674 0.0 0.0 0.0 603.2870577447874 603.2870577447874 22.2062251842808 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}VPQ 3.4674 - 33 + 1 1.49 68998.0 1.0 3571 5223 8791 HBL1_DMSO_200M_050219_1,8796 HBL1_DMSO_200M_050219_1,8796,LPRDFRQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8797 46.213 23.0 2967900.0 25 0 1119900.0 + 34642 SPPPPNPVV 9 62 452.250555006818 902.486557080436 2 452.2505676150322 MULTI CID FTMS 0 0 0 8791 737816.1875 0.7473826858792545 2 -0.2388153076171875 6 Unmodified _SPPPPNPVV_ ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A 10.823927491677226 0.5436922275383211 3 V 1 8 12.474 0.0 0.0 1.3822 0.0 0.0 785.406919484536 0.0 785.406919484536 0.0 1.6367946719316515 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.3822 + + 28 + 1 1.49 57266.2 1.0 3572 5223 8791 HBL1_DMSO_200M_050219_1,8797 HBL1_DMSO_200M_050219_1,8797,SPPPPNPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8798 46.215 109.0 848020.0 25 0 294420.0 + 5813 DPRHGRYLTV 10 71 607.3252128271671 1212.635872721134 2 607.3253051638603 MULTI CID FTMS 0 0 0 8791 726292.4375 0.2503543103624341 2 -0.2388153076171875 7 Unmodified _DPRHGRYLTV_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000454403.1_1_13:41958968-41959286:-|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3 10.799506525563784 0.666336781075408 3 DV[PG]H 5 8 22.218 0.0 0.0 1.8322 0.0 0.0 0.0 704.3736666315061 704.3736666315061 15.4794656189555 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV[PG]H 1.8322 - 28 + 1 1.49 71837.3 1.0 3573 5223 8791 HBL1_DMSO_200M_050219_1,8798 HBL1_DMSO_200M_050219_1,8798,DPRHGRYLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8799 46.216 51.0 1053900.0 25 0 105550.0 + 16532 KAVESLRQI 9 79 522.3139288246849 1042.6133047161698 2 522.3140746951103 MULTI CID FTMS 0 0 0 8791 525335.375 0.9655383856878176 1 -0.061767578125 8 Unmodified _KAVESLRQI_ ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B 11.494710602746466 0.5255349189887087 3 KAVE 4 5 36.67 0.0 0.0 3.5171 0.0 0.0 0.0 612.3493746393186 612.3493746393186 26.3925886967923 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + KAVE 3.5171 + + 60 + 1 1.49 49879.7 1.0 3574 5223 8791 HBL1_DMSO_200M_050219_1,8799 HBL1_DMSO_200M_050219_1,8799,KAVESLRQI False True KAVESLRQI 46.216441 522.31407469511 2627827.75 8791.0 nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENSG00000137713|ENST00000527614|PPP2R1B 2.6543307304382324 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8800 46.22 208.0 419860.0 25 0 27751.0 21871 LPPESTQV 8 108 435.73190224853386 869.4492515638677 2 435.7321044802666 MULTI CID FTMS 0 0 0 8791 400518.03125 0.7627966833645914 -1 0.0336990356445312 9 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 42.96799951952854 0.1846367511955703 3 {I|L}T{M(Oxidation (M))|F}QV 5 5 26.547 0.0 0.0 3.0533 0.0 0.0 263.1452487335927 0.0 263.1452487335927 0.0 0.3715857056943683 0.0 0.0 0 0.0 0.0 0.7887254899964358 0.4247425010840047 {I|L}T{M(Oxidation (M))|F}QV 3.0533 - 335 + 1 1.49 71302.5 1.0 3575 5223 8791 HBL1_DMSO_200M_050219_1,8800 HBL1_DMSO_200M_050219_1,8800,LPPESTQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8801 46.231 605.0 235490.0 25 0 14748.0 27221 PGLEEHWAL 9 177 526.2623056178801 1050.51005830256 2 526.2629882693291 MULTI CID FTMS 0 0 0 8791 234920.09375 1.0 0 0.0 10 Unmodified _PGLEEHWAL_ ENST00000376499.7_2_9:84303922-84304000:-|nuORF 23.1484247019978 0.2366544122328345 3 {[QN]|[E{I|L}]|[KN]}PADP[EP]A{I|L} 10 7 + 55.128 0.0 0.0 5.2478 5.2478 78.572 0.0 0.0 0.0 4.636916154248908 16.532125137753432 4.636916154248908 3.076512587389644 0 1.4291746928241125 0.744727494896694 0.4247425010840047 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}PADP[EP]A{I|L};{[QN]|[E{I|L}]|[KN]}[PA]DWHA{I|L};[DP]VVDWHA{I|L};[VP]DVDWHA{I|L};[QP]YHP[EP]A{I|L};[EP]{I|L}WD[HA]A{I|L};[KA][DN]PDAHA{I|L};[NP][WQ]P[EP]A{I|L};[QP]YHWHA{I|L};{[ET]|[MV]}[TP]PDAHA{I|L} 5.2478;4.9549;4.8064;4.4263;3.9796;3.6328;3.5869;3.4499;3.4351;3.3758 -;-;-;-;-;-;-;-;-;- 2180 1 1.49 116918.8 1.0 3576 5223 8791 HBL1_DMSO_200M_050219_1,8801 HBL1_DMSO_200M_050219_1,8801,PGLEEHWAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8802 46.243 686.0 303670.0 25 0 39922.0 + 31494 RQDDYFTSYNN 11 151 711.7993234013727 1421.5840938695453 2 711.8005248904228 MULTI CID FTMS 0 0 0 8791 199433.75 0.0500350738193507 -3 0.2404022216796875 11 Unmodified _RQDDYFTSYNN_ REV__ENSG00000119321|ENST00000238256|FKBP15;REV__nc|ENSG00000119321|Q5T1M5-2|FKBP15;REV__nc|ENSG00000119321|Q5T1M5-3|FKBP15 23.78978130925829 0.5336113198261219 3 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y 13 -1 + 141.84 0.0 0.0 9.9775 9.9775 90.247 0.0 0.0 0.0 9.71848749616356 16.642078980768062 9.71848749616356 4.758121333535769 0 1.610924374808178 1.3979400086720375 2.093322544373148 2.8413303119553293 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGADAGA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGA[AG]DA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEQAQDA{M(Oxidation (M))|F}Y;[QA]DHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGADQA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQDA{M(Oxidation (M))|F}Y 9.9775;9.6427;9.3455;9.3393;9.3309;9.3071;9.2938;9.2355;9.2121;9.134 -;-;-;-;-;-;-;-;-;- 58627 1 1.49 149677.6 1.0 3577 5223 8791 HBL1_DMSO_200M_050219_1,8802 HBL1_DMSO_200M_050219_1,8802,RQDDYFTSYNN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8803 46.248 275.0 437630.0 25 0 23405.0 + 39316 VAEHQVVY 8 142 472.74554128639335 0 472.7459594607353 PEAK CID FTMS 0 0 0 8791 178114.109375 1.0 0 0.0 12 Unmodified _VAEHQVVY_ REV__ENSG00000176142|ENST00000319172|TMEM39A 14.581692164780916 0.4900557725783909 3 PP 2 -1 5.5732 0.0 0.0 0.59071 0.0 0.0 169.00043482407574 577.3443087213499 746.3447435454257 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.59071 - 262 + 1 1.49 94414.4 1.0 3578 5223 8791 HBL1_DMSO_200M_050219_1,8803 HBL1_DMSO_200M_050219_1,8803,VAEHQVVY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8804 46.252 186.0 329390.0 25 0 45175.0 + -1 AAEGGEGCWRM 11 87 612.251805441265 1222.48905794933 2 612.2517578005791 MULTI CID FTMS 0 0 0 8791 142715.40625 0.1216098237263316 -2 0.1288070678710937 13 Carbamidomethyl (C) _AAEGGEGC(Carbamidomethyl (C))WRM_ REV__ENST00000301785.5_1_11:62482034-62482370:-|nuORF 17.11289562659939 0.6791789249425932 3 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 -1 + 77.529 0.0 0.0 6.3419 6.3419 88.36 0.0 0.0 0.0 5.764837301042718 72.04419085293083 5.764837301042718 9.164539485499262 0 0.9247425010840048 0.0 0.6861818737241735 0.805462187404089 [HD]EAQQDA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQDA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQW{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]DA{M(Oxidation (M))|F}Y;{[DA]|[EG]}AA[HD]QDA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[AG]DA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[AG]QDA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[AG]W{M(Oxidation (M))|F}Y 6.3419;5.5922;5.5922;4.5618;4.4178;4.1866;4.1833;3.8122;3.8122;3.6646 -;-;-;-;-;-;-;-;-;- 429 1 1.49 50048.1 1.0 3579 5223 8791 HBL1_DMSO_200M_050219_1,8804 HBL1_DMSO_200M_050219_1,8804,AAEGGEGCWRM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8805 46.264 734.0 337020.0 25 0 23548.0 -1 IVLVRINQGQM 11 143 643.8656870820383 1285.7168212308766 2 643.8660766482353 MULTI CID FTMS 0 0 0 8791 116186.1328125 0.1777372892440234 -1 0.0336990356445312 14 Oxidation (M) _IVLVRINQGQM(Oxidation (M))_ ENSG00000078269|ENST00000355585|SYNJ2;ENST00000367112.1_2_6:158500311-158517393:+|nuORF;nc|ENSG00000078269|O15056-2|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2 19.256988751693697 0.6345794173041263 3 {I|L}{I|L}VVY[NS]V{I|L} 9 -1 67.157 0.0 0.0 5.2233 0.0 0.0 0.0 282.1093844049438 282.1093844049438 22.92931613413308 0.0 0.0 0.0 0 1.3807196863200843 1.6989700043360187 0.0 0.6861818737241735 {I|L}{I|L}VVY[NS]V{I|L} 5.2233 - 3206 + 1 1.49 185408.0 1.0 3580 5223 8791 HBL1_DMSO_200M_050219_1,8805 HBL1_DMSO_200M_050219_1,8805,IVLVRINQGQM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8807 46.269 45.0 1774200.0 25 0 179220.0 + 20798 LLVVYPWTQR 10 69 637.8665177237659 1273.7184825143318 2 637.8669921755791 MULTI CID FTMS 0 0 0 8806 1946293.0 1.0 0 0.0 1 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 53.40400417844725 0.0601721406801337 3 {I|L}{I|L}VVYPW[QT]R 10 0 + 74.135 0.0 0.0 5.8203 5.8203 84.925 0.0 0.0 0.0 55.71842196392844 0.8804562952784067 0.8804562952784067 7.123339658939997 0 1.5 1.6989700043360187 0.3807196863200844 0.8494850021680094 + + {I|L}{I|L}VVYPW[QT]R;{I|L}{I|L}VVYP{[CP]|[EA]}[KS]R;{I|L}{I|L}VVYP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QA]{I|L} 5.8203;5.2611;4.9331 +;-;- + 299 + 1 1.481 65619.4 1.0 3581 5224 8806 HBL1_DMSO_200M_050219_1,8807 HBL1_DMSO_200M_050219_1,8807,LLVVYPWTQR True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8808 46.282 770.0 77012.0 25 0 11328.0 + 24190 LYYSSSRKVTY 11 97 683.8536030014249 1365.6926530696496 2 683.8551513552666 MULTI CID FTMS 0 0 0 8806 50059.08203125 0.3010174360564399 3 -0.3091201782226562 2 Unmodified _LYYSSSRKVTY_ ENST00000453465.1_1_10:21915067-21915193:-|nuORF;ENST00000478691.5_1_1:23664326-23665089:-|nuORF;ENST00000490652.1_1_1:23664981-23665089:-|nuORF 17.44264345198275 0.6723198055858692 3 {I|L}YYEA 5 8 63.003 0.0 0.0 4.6133 0.0 0.0 0.0 723.3786104791624 723.3786104791624 50.52887198244136 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {I|L}YYEA 4.6133 - 49 + 1 1.481 50688.9 1.0 3582 5224 8806 HBL1_DMSO_200M_050219_1,8808 HBL1_DMSO_200M_050219_1,8808,LYYSSSRKVTY False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8809 46.283 26.0 1633300.0 25 0 411130.0 + 38815 TVFSHAQTV 9 67 495.2564672204266 988.4983815076532 2 495.2567321658134 MULTI CID FTMS 0 0 0 8806 1989466.5 0.1496744159872271 -2 0.0954666137695312 3 Unmodified _TVFSHAQTV_ ENSG00000177954|ENST00000651669|RPS27;ENSG00000185088|ENST00000330964|RPS27L;ENST00000482846.1_1_15:63447754-63448774:-|nuORF 20.41453444215458 0.284085796332423 3 [HA]YAQTVTV 9 7 + 39.556 0.0 0.0 4.0017 4.0017 74.212 0.0 0.0 0.0 3.3585655819296605 5.043548945430636 3.3585655819296605 3.0102999566398125 0 0.5682503180159344 0.0 0.5 0.0 [HA]YAQTVTV;[HA]S{M(Oxidation (M))|F}QTVTV;[HA]SQ{M(Oxidation (M))|F}TVTV;[HA]YA[AG]TVTV;[HA]S{M(Oxidation (M))|F}[AG]TVTV;[HA]S[AG]{M(Oxidation (M))|F}TVTV;[HA]YA[KA]ETV;[HA]S{M(Oxidation (M))|F}[KA]ETV 4.0017;3.6971;3.0881;3.0701;2.7656;2.1565;1.5009;1.1964 -;-;-;-;-;-;-;- 129 1 1.481 36971.5 1.0 3583 5224 8806 HBL1_DMSO_200M_050219_1,8809 HBL1_DMSO_200M_050219_1,8809,TVFSHAQTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8810 46.287 216.0 192310.0 25 0 20003.0 -1 0 67 600.0004067514204 1796.9793908544611 3 600.3344604372978 MULTI CID FTMS 0 0 0 8806 1290237.375 0.1240515050736384 11 -0.8687362670898438 4 3 [{I|L}V]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WWAH{I|L}D 11 -1 42.58 0.0 0.0 2.3695 0.0 0.0 0.0 370.2106112115844 370.2106112115844 26.852741740233164 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}V]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WWAH{I|L}D 2.3695 - 165 + 1 1.481 38140.5 1.0 3584 5224 8806 HBL1_DMSO_200M_050219_1,8810 HBL1_DMSO_200M_050219_1,8810, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8811 46.29 118.0 337400.0 25 0 19130.0 -1 0 55 1037.974445800579 2073.934338667958 2 1038.475878894329 MULTI CID FTMS 0 0 0 8806 1022037.0 1.0 0 0.0 5 3 S{M(Oxidation (M))|F}[DG]{I|L}ST 7 -1 23.231 0.0 0.0 1.1202 0.0 0.0 423.1978407204954 940.4206541916616 1363.618494912157 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S{M(Oxidation (M))|F}[DG]{I|L}ST 1.1202 - 190 + 1 1.481 34039.0 1.0 3585 5224 8806 HBL1_DMSO_200M_050219_1,8811 HBL1_DMSO_200M_050219_1,8811, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8812 46.295 283.0 56812.0 25 0 4522.6 13968 HYRFWLFH 8 36 603.3016234084777 0 603.5031616091728 PEAK CID FTMS 0 0 0 8806 368742.375 1.0 0 0.0 6 Unmodified _HYRFWLFH_ ENSG00000183153|ENST00000578689|GJD3;nc|ENSG00000183153|Q8N144-2|GJD3 2.577480529830294 0.5910327097116076 3 {I|L} 1 7 6.9897 0.0 0.0 0.58026 0.0 0.0 285.099083143324 803.3830050104124 1088.4820881537364 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.58026 + + 2 + 1 1.481 20339.3 1.0 3586 5224 8806 HBL1_DMSO_200M_050219_1,8812 HBL1_DMSO_200M_050219_1,8812,HYRFWLFH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8813 46.301 342.0 95858.0 25 0 4004.0 + 28293 PRPWHWHWRRR 11 64 835.4488171269794 1668.8830813207587 2 835.4508544802666 MULTI CID FTMS 0 0 0 8806 793565.9375 1.0 0 0.0 7 Unmodified _PRPWHWHWRRR_ REV__ENST00000321582.9_1_9:124855435-124855555:-|nuORF 0.0833504608790944 0.8747546825782322 3 [{I|L}V]Q{M(Oxidation (M))|F}S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{[TV]|[{I|L}S]}W 11 -1 53.614 0.0 0.0 3.2125 0.0 0.0 0.0 333.1575106256469 333.1575106256469 32.442741907339574 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.0 0.3807196863200844 [{I|L}V]Q{M(Oxidation (M))|F}S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{[TV]|[{I|L}S]}W 3.2125 - 287 + 1 1.481 28942.9 1.0 3587 5224 8806 HBL1_DMSO_200M_050219_1,8813 HBL1_DMSO_200M_050219_1,8813,PRPWHWHWRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8814 46.307 328.0 25947.0 25 0 1536.6 43454 WTHYINYKVHF 11 25 754.3775471780731 0 754.1246826052666 PEAK CID FTMS 0 0 0 8806 641311.8125 1.0 0 0.0 8 Unmodified _WTHYINYKVHF_ ENST00000357997.9_1_12:133331595-133331631:-|nuORF 1.1933415558491238 0.4761840153648598 3 {I|L} 1 10 6.9897 0.0 0.0 0.4639 0.0 0.0 587.2578276551711 803.3800142877561 1390.6378419429273 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.4639 + + 1 + 1 1.481 16172.4 1.0 3588 5224 8806 HBL1_DMSO_200M_050219_1,8814 HBL1_DMSO_200M_050219_1,8814,WTHYINYKVHF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8815 46.315 408.0 123880.0 25 0 40562.0 + 32234 RWKGTYTQFA 10 48 629.3230468630791 0 629.3230468630791 PEAK CID FTMS 0 0 0 -1 0 9 Unmodified _RWKGTYTQFA_ REV__ENST00000542008.1_1_19:58144599-58145500:+|nuORF 5.731851221503515 0.3961065659209837 3 E 1 -1 5.4846 0.0 0.0 0.43645 0.0 0.0 530.2295765369018 594.3282564752561 1124.557833012158 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.43645 - 15 + 1 1.481 46129.3 1.0 3589 5224 8806 HBL1_DMSO_200M_050219_1,8815 HBL1_DMSO_200M_050219_1,8815,RWKGTYTQFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8816 46.324 519.0 111120.0 25 0 42080.0 -1 0 50 786.1515991091728 0 786.1515991091728 PEAK CID FTMS 0 0 0 -1 0 10 3 N 1 -1 4.6041 0.0 0.0 0.2932 0.0 0.0 1036.1719593494015 417.06199060611567 1453.2339499555171 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.2932 - 5 + 1 1.481 51473.8 1.0 3590 5224 8806 HBL1_DMSO_200M_050219_1,8816 HBL1_DMSO_200M_050219_1,8816, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8817 46.327 179.0 233380.0 25 0 23804.0 39990 VGAYMTHVCF 10 76 564.2551336388725 1126.495714344545 2 566.2584106326103 MULTI CID FTMS 0 0 0 8806 208531.0 1.0 0 0.0 11 Unmodified _VGAYMTHVCF_ ENSG00000113088|ENST00000231009|GZMK 7.910154910731844 0.6900473968920092 3 K 1 10 13.167 0.0 0.0 1.1689 0.0 0.0 980.3903199127076 0.0 980.3903199127076 0.0 1.384671675096989 0.0 0.0 0 0.0 0.0 0.0 0.1747425010840047 K 1.1689 - 70 + 1 1.481 40964.5 1.0 3591 5224 8806 HBL1_DMSO_200M_050219_1,8817 HBL1_DMSO_200M_050219_1,8817,VGAYMTHVCF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8818 46.339 634.0 177830.0 25 0 9947.9 -1 VVKYKPVALQC 11 126 652.8716918826103 0 652.8716918826103 PEAK CID FTMS 0 0 0 -1 0 12 Carbamidomethyl (C) _VVKYKPVALQC(Carbamidomethyl (C))_ ENSG00000143341|ENST00000271588|HMCN1;nc|ENSG00000143341|Q96RW7-2|HMCN1 13.042465956692816 0.4221659143281722 3 VVYPW 5 -1 24.068 0.0 0.0 1.8461 0.0 0.0 256.1759534331239 400.1960238092407 656.3719772423646 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VVYPW 1.8461 - 167 + 1 1.481 89471.1 1.0 3592 5224 8806 HBL1_DMSO_200M_050219_1,8818 HBL1_DMSO_200M_050219_1,8818,VVKYKPVALQC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8819 46.351 671.0 249010.0 25 0 13804.0 + 16447 KAIETLNRL 9 203 529.3206036653713 1056.6266543975426 2 529.3199951052666 MULTI CID FTMS 0 0 0 8806 161126.984375 0.9205239316314088 -1 0.061767578125 13 Unmodified _KAIETLNRL_ REV__ENSG00000176979|ENST00000512596|TRIM60 29.84058131909904 0.1515068451768857 3 KA{I|L}ET 5 -1 52.206 0.0 0.0 4.9408 0.0 0.0 0.0 511.2982360506971 511.2982360506971 33.737125054200234 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 KA{I|L}ET 4.9408 + + 1607 + 1 1.481 128185.0 1.0 3593 5224 8806 HBL1_DMSO_200M_050219_1,8819 HBL1_DMSO_200M_050219_1,8819,KAIETLNRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8820 46.364 733.0 440980.0 25 0 64775.0 -1 LETCQAVQ 8 227 474.7261702176341 947.4377875020682 2 474.7262451052666 MULTI CID FTMS 0 0 0 8806 143843.296875 0.0344155015204477 10 -0.86260986328125 14 Carbamidomethyl (C) _LETC(Carbamidomethyl (C))QAVQ_ ENSG00000137478|ENST00000409418|FCHSD2;nc|ENSG00000137478|O94868-2|FCHSD2;nc|ENSG00000137478|O94868-3|FCHSD2 19.438996006549623 0.6237395211498085 3 {[QN]|[E{I|L}]|[KN]}TMP 5 -1 25.291 0.0 0.0 2.6694 0.0 0.0 0.0 373.154096275859 373.154096275859 9.78810700930062 0.0 0.0 0.0 0 0.0 1.154901959985743 0.9517188504113846 0.0 {[QN]|[E{I|L}]|[KN]}TMP 2.6694 - 687 1 1.481 243816.2 1.0 3594 5224 8806 HBL1_DMSO_200M_050219_1,8820 HBL1_DMSO_200M_050219_1,8820,LETCQAVQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8821 46.377 715.0 119570.0 25 0 24922.0 -1 SEVMYPHLME 10 124 626.2705566287041 0 626.2705566287041 PEAK CID FTMS 0 0 0 -1 0 15 Oxidation (M) _SEVM(Oxidation (M))YPHLME_ ENSG00000143228|ENST00000271452|NUF2;ENST00000487578.2_1_1:163295841-163298095:+|nuORF 13.042465956692816 0.351733747982019 3 ASV 3 -1 13.188 0.0 0.0 1.0546 0.0 0.0 258.9715750307849 731.3955685048388 990.3671435356237 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ASV 1.0546 - 117 + 1 1.481 67829.1 1.0 3595 5224 8806 HBL1_DMSO_200M_050219_1,8821 HBL1_DMSO_200M_050219_1,8821,SEVMYPHLME False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8822 46.385 433.0 342940.0 25 0 13983.0 -1 DSASLCRQV 9 204 345.83448970306966 0 345.8345519900322 PEAK CID FTMS 0 0 0 8806 131723.9375 1.0 0 0.0 16 Carbamidomethyl (C) _DSASLC(Carbamidomethyl (C))RQV_ ENST00000527076.1_1_16:1411666-1412341:+|nuORF 7.101721422024254 0.3444685223463735 3 H 1 -1 6.9897 0.0 0.0 1.0135 0.0 0.0 83.29207403328935 466.2793172683379 549.5713913016273 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.0135 - 30 + 1 1.481 120451.6 1.0 3596 5224 8806 HBL1_DMSO_200M_050219_1,8822 HBL1_DMSO_200M_050219_1,8822,DSASLCRQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8823 46.399 800.0 149930.0 25 0 9496.5 -1 MVMRCGWRARR 11 111 747.8682850486422 1493.7220171640845 2 747.8681518435478 MULTI CID FTMS 0 0 0 8806 115464.3671875 0.6908908520241673 -2 0.0954666137695312 17 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))VMRC(Carbamidomethyl (C))GWRARR_ ENST00000514450.2_1_4:15471657-15513157:+|nuORF 5.731851221503515 0.8481046878870278 3 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}KVYEYG{I|L}YE 12 -1 + 73.318 0.0 0.0 4.9084 4.9084 79.719 0.0 0.0 0.0 7.20159303405957 7.20159303405957 7.20159303405957 4.948500216800937 0 1.2302046884880935 0.0 0.3494850021680094 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}KVYEYG{I|L}YE;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}WP[HV]YG{I|L}YE;{M(Oxidation (M))|F}Y{I|L}GYEYVT[{I|L}A]R;{M(Oxidation (M))|F}Y{I|L}GYEYVK{[QG]|[NA]}K;[QP]PP[H{I|L}]GA{[ES]|[DT]|[{I|L}C]}G{I|L}YE;[QP]PP[H{I|L}]Q{[ES]|[DT]|[{I|L}C]}G{I|L}YE;{[HG]|PP}QPP[{I|L}P]A{[ES]|[DT]|[{I|L}C]}G{I|L}YE;{M(Oxidation (M))|F}Y{I|L}GY[HV]PW{[QG]|[NA]}K;{[HG]|PP}QP[H{I|L}]GA{[ES]|[DT]|[{I|L}C]}G{I|L}YE;{M(Oxidation (M))|F}Y{I|L}G{[ES]|[DT]|[{I|L}C]}AG[RP]G{I|L}{NN|[MP]|[D{I|L}]|[EV]} 4.9084;4.5772;4.4263;4.0374;3.6577;3.5308;3.5092;3.4722;3.3913;3.326 -;-;-;-;-;-;-;-;-;- 1139 1 1.481 88490.6 0.949999988079071 3597 5224 8806 HBL1_DMSO_200M_050219_1,8823 HBL1_DMSO_200M_050219_1,8823,MVMRCGWRARR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8824 46.414 800.0 78046.0 25 0 10046.0 -1 0 80 1074.0687955290514 0 1074.070605456829 PEAK CID FTMS 0 0 0 8806 99141.859375 1.0 0 0.0 18 3 DASAA 5 -1 21.075 0.0 0.0 0.98201 0.0 0.0 1504.8580367594716 223.0726717584594 1727.930708517931 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 DASAA 0.98201 - 131 + 1 1.481 47623.5 0.7099999785423279 3598 5224 8806 HBL1_DMSO_200M_050219_1,8824 HBL1_DMSO_200M_050219_1,8824, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8825 46.428 780.0 57227.0 25 0 4371.8 + 32296 RWPRWHRQDRS 11 89 790.4066493847465 0 790.4066039919853 PEAK CID FTMS 0 0 0 8806 94218.21875 1.0 0 0.0 19 Unmodified _RWPRWHRQDRS_ REV__ENSG00000119720|ENST00000354366|NRDE2 1.1933415558491238 0.4761840153648598 3 VTQ 3 -1 15.49 0.0 0.0 0.9811 0.0 0.0 807.4211429357151 440.17890344791255 1247.6000463836276 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 VTQ 0.9811 - 268 + 1 1.481 36113.5 1.0 3599 5224 8806 HBL1_DMSO_200M_050219_1,8825 HBL1_DMSO_200M_050219_1,8825,RWPRWHRQDRS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8826 46.441 800.0 221170.0 25 0 11746.0 40083 VGHPVSVV 8 252 397.23260666542336 792.4506603976467 2 397.2324706912041 MULTI CID FTMS 0 0 0 8806 96026.359375 1.0 0 0.0 20 Unmodified _VGHPVSVV_ ENSG00000165891|ENST00000322886|E2F7;nc|ENSG00000165891|Q96AV8-3|E2F7 6.354104778181461 0.7857632046190106 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV 7 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} + + 14.169 -1.2595 -0.2193 1.788 1.788 48.694 0.0 0.0 0.0 0.0 3.891115232316516 0.0 0.0 0 0.0 0.0 0.1694451763165201 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV 1.788 - 244 + 1 1.481 134967.7 0.8600000143051147 3600 5224 8806 HBL1_DMSO_200M_050219_1,8826 HBL1_DMSO_200M_050219_1,8826,VGHPVSVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8828 46.446 1.1 39866000.0 25 0 5651600.0 + 2181 AQAPDLQRV 9 69 499.274774576537 996.534996219874 2 499.2754089236259 MULTI CID FTMS 0 0 0 8827 47668000.0 0.6302359241140312 1 -0.040679931640625 1 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 32.78568957990786 0.1150597335874693 3 [QA]APD{I|L} 6 3 44.607 0.0 0.0 4.4762 0.0 0.0 0.0 398.2165926568969 398.2165926568969 32.61703584358466 0.0 0.0 0.0 0 1.0 0.7695510786217261 0.0 0.0 + [QA]APD{I|L} 4.4762 + + 25 + 1 1.475 41422.6 1.0 3601 5225 8827 HBL1_DMSO_200M_050219_1,8828 HBL1_DMSO_200M_050219_1,8828,AQAPDLQRV True True AQAPDLQRV 46.445532 499.275408923626 2176848768.0 8827.0 ENSG00000111641|ENST00000322166|NOP2;;nc|ENSG00000111641|P46087-4|NOP2;;nc|ENSG00000111641|P46087-2|NOP2;;nc|ENSG00000111641|P46087-3|NOP2 7.695345719655354 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8829 46.447 2.0 23894000.0 25 0 2153000.0 + 24958 MPPPPPQGV 9 75 460.2385793050109 918.462605676822 2 460.2391235232353 MULTI CID FTMS 0 0 0 8827 27680774.0 0.9195229324201432 2 -0.1320724487304687 2 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 67.03532852164291 0.0222449892513529 3 {NN|[MP]|[D{I|L}]|[EV]}PPPP 6 3 35.234 0.0 0.0 3.8362 0.0 0.0 0.0 299.1304883274657 299.1304883274657 10.791812460476253 0.0 0.0 0.0 0 1.2059771852360797 0.0 0.3252574989159953 0.0 + {NN|[MP]|[D{I|L}]|[EV]}PPPP 3.8362 + + 191 1 1.475 46195.0 1.0 3602 5225 8827 HBL1_DMSO_200M_050219_1,8829 HBL1_DMSO_200M_050219_1,8829,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8830 46.448 11.0 5182800.0 25 0 728410.0 + 6671 EAYLGKTV 8 71 440.742318239149 879.470083545098 2 440.7423583865166 MULTI CID FTMS 0 0 0 8827 5344581.5 0.6583386567066004 -2 0.2388153076171875 3 Unmodified _EAYLGKTV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 46.020951573049366 0.1579632664462935 3 {I|L}GKTV 5 3 23.9 0.0 0.0 2.7176 0.0 0.0 363.1415309156782 0.0 363.1415309156782 0.0 -1.57083783374107 -1.57083783374107 0.0 0 0.2887254899964357 0.0 0.8494850021680094 0.0 + {I|L}GKTV 2.7176 + + 121 + 1 1.475 51822.2 1.0 3603 5225 8827 HBL1_DMSO_200M_050219_1,8830 HBL1_DMSO_200M_050219_1,8830,EAYLGKTV False True EAYLGKTV 46.44789 440.742358386517 97496320.0 8827.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 6.612012227376302 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8831 46.449 28.0 1543300.0 25 0 232720.0 43733 YDLNKTQMD 9 76 564.2551336388725 1126.495714344545 2 564.2557250857353 MULTI CID FTMS 0 0 0 8827 2182644.75 0.9366650434361676 -1 0.1770477294921875 4 Unmodified _YDLNKTQMD_ ENSG00000135677|ENST00000258145|GNS;ENST00000540883.1_1_12:65116746-65122837:-|nuORF;nc|ENSG00000135677|P15586-2|GNS 31.26834338654808 0.1333407332142048 3 {[YD]|[{M(Oxidation (M))|F}M]}N{I|L}Q[KS]EM 9 5 + 75.423 0.0 0.0 6.6954 6.6954 80.448 0.0 0.0 0.0 50.959471728614574 16.21523434085148 16.21523434085148 1.5051499783199065 0 0.8494850021680094 2.0 0.3807196863200844 0.4247425010840047 {[YD]|[{M(Oxidation (M))|F}M]}N{I|L}Q[KS]EM;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}[KT]NEM;{[YD]|[{M(Oxidation (M))|F}M]}GG{I|L}Q[KS]EM;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}[AG][KS]EM;{[YD]|[{M(Oxidation (M))|F}M]}GG{I|L}[KT]NEM;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}[KT]GGEM;{[YD]|[{M(Oxidation (M))|F}M]}N[KT]{I|L}NEM;{[YD]|[{M(Oxidation (M))|F}M]}[KS]Q{I|L}N{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YD]|[{M(Oxidation (M))|F}M]}N[KT]{I|L}N{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QV]|[N{I|L}]|[RA]|[KV]}{[YC]|[HE]}Q{I|L}N{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 6.6954;6.5618;5.878;5.878;5.7444;5.7444;5.4459;5.2981;5.1645;4.6311 -;-;-;-;-;-;-;-;-;- 254 + 1 1.475 38846.1 1.0 3604 5225 8827 HBL1_DMSO_200M_050219_1,8831 HBL1_DMSO_200M_050219_1,8831,YDLNKTQMD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8832 46.45 22.0 1868500.0 25 0 176770.0 + 43665 YARQGQIEV 9 68 532.2803377326778 1062.5461225321556 2 532.2789794802666 MULTI CID FTMS 0 0 0 8827 1989537.5 0.3049596432338325 1 -0.040679931640625 5 Unmodified _YARQGQIEV_ ENSG00000064393|ENST00000406875|HIPK2;ENSG00000110422|ENST00000303296|HIPK3;ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2;nc|ENSG00000110422|Q9H422-2|HIPK3;nc|ENSG00000163349|Q86Z02-2|HIPK1 19.256988751693697 0.3154191944385105 3 {[QN]|[E{I|L}]|[KN]}S[{M(Oxidation (M))|F}V]Q{I|L}EV 9 5 + 44.447 0.0 0.0 4.183 4.183 80.485 0.0 0.0 0.0 8.538719643217611 16.478174818886373 8.538719643217611 8.538719643217611 0 0.3054621874040891 1.154901959985743 0.0 0.0 {[QN]|[E{I|L}]|[KN]}S[{M(Oxidation (M))|F}V]Q{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}T[{M(Oxidation (M))|F}V]Q{I|L}EV;{[QN]|[E{I|L}]|[KN]}S[{M(Oxidation (M))|F}V][AG]{I|L}EV;[{I|L}T]D[{M(Oxidation (M))|F}V]Q{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}T[{M(Oxidation (M))|F}V][AG]{I|L}EV;[{I|L}T]D[{M(Oxidation (M))|F}V][AG]{I|L}EV;HH{I|L}{[RE]|[WV]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;HH{I|L}[Y{I|L}]{[QG]|[NA]}PV;HH{I|L}{[RE]|[WV]}[Q{I|L}]M 4.183;3.3794;3.3164;2.5841;2.5128;1.7175;1.0224;0.67102;0.34306 -;-;-;-;-;-;-;-;- 133 1 1.475 39897.1 1.0 3605 5225 8827 HBL1_DMSO_200M_050219_1,8832 HBL1_DMSO_200M_050219_1,8832,YARQGQIEV False True YARQGQIEV 46.450246 532.278979480267 42168784.0 8827.0 nc|ENSG00000064393|Q9H2X6-2|HIPK2;;nc|ENSG00000110422|Q9H422-2|HIPK3;;nc|ENSG00000163349|Q86Z02-2|HIPK1;;ENSG00000163349|ENST00000426820|HIPK1;;ENSG00000110422|ENST00000303296|HIPK3;;ENSG00000064393|ENST00000406875|HIPK2;;nc|ENSG00000064393|Q9H2X6-3|HIPK2 3.5540311336517334 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8833 46.451 42.0 2101400.0 25 0 306020.0 + 23260 LSVMMKLLS 9 98 341.19773571948457 1020.5713777586536 3 341.1976196169853 MULTI CID FTMS 0 0 0 8827 1728228.0 0.932631586474012 -2 0.2388153076171875 6 Unmodified _LSVMMKLLS_ ENSG00000149292|ENST00000529221|TTC12;ENST00000480233.1_1_11:113235406-113237019:+|nuORF;ENST00000496311.1_1_11:113235534-113237012:+|nuORF;nc|ENSG00000149292|Q9H892-2|TTC12 14.40537977576856 0.4467465336100671 3 {[TV]|[{I|L}S]}N 3 7 35.502 0.0 0.0 3.4786 0.0 0.0 0.0 703.3912447565061 703.3912447565061 23.02764671460736 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.4247425010840047 {[TV]|[{I|L}S]}N 3.4786 - 103 + 1 1.475 77390.7 1.0 3606 5225 8827 HBL1_DMSO_200M_050219_1,8833 HBL1_DMSO_200M_050219_1,8833,LSVMMKLLS False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8834 46.453 28.0 1736900.0 25 0 163390.0 + 18088 KTIETSPSL 9 78 488.2713106711886 0 488.2732421755791 PEAK CID FTMS 0 0 0 8827 1438423.25 0.4293736981070206 -2 0.2388153076171875 7 Unmodified _KTIETSPSL_ ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI 61.60191391372663 0.0152064990424181 3 STRPS 5 6 37.964 0.0 0.0 3.8956 0.0 0.0 315.1769009599481 128.07216821842033 443.2490691783685 0.0 0.0 0.0 0.0 0 1.0 0.0 1.2302046884880935 0.0 STRPS 3.8956 - 258 + 1 1.475 41010.7 1.0 3607 5225 8827 HBL1_DMSO_200M_050219_1,8834 HBL1_DMSO_200M_050219_1,8834,KTIETSPSL True True KTIETSPSL 46.452611 488.273242175579 22624300.0 8827.0 nc|ENSG00000140525|Q9NVI1-2|FANCI;;nc|ENSG00000140525|Q9NVI1-1|FANCI;;ENSG00000140525|ENST00000310775|FANCI 6.3665852546691895 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8835 46.454 29.0 2027800.0 25 0 233150.0 + 3227 AWPEQVRLS 9 64 543.2906565684075 1084.5667602036149 2 543.2896606326103 MULTI CID FTMS 0 0 0 8827 1418146.625 0.6831996863772842 -4 0.3676223754882812 8 Unmodified _AWPEQVRLS_ REV__ENSG00000140853|ENST00000688547|NLRC5;REV__ENST00000545081.5_1_16:57093337-57116437:+|nuORF;REV__nc|ENSG00000140853|Q86WI3-4|NLRC5;REV__nc|ENSG00000140853|Q86WI3-6|NLRC5 9.38312468134398 0.5871240394367778 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PER 5 -1 43.456 0.0 0.0 4.0067 0.0 0.0 0.0 442.2303560846313 442.2303560846313 20.779550148593486 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PER 4.0067 - 30 + 1 1.475 47563.1 1.0 3608 5225 8827 HBL1_DMSO_200M_050219_1,8835 HBL1_DMSO_200M_050219_1,8835,AWPEQVRLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8836 46.455 58.0 1189900.0 25 0 178640.0 + 21300 LPENSMRAV 9 76 508.76225008574977 1015.5099472382996 2 508.7632018923759 MULTI CID FTMS 0 0 0 8827 1184372.5 0.2540281578005335 -2 0.2388153076171875 9 Unmodified _LPENSMRAV_ chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1;ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-17|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1 38.17557092003332 0.0854718145212029 3 {I|L}PENSM{[QV]|[N{I|L}]|[RA]|[KV]}V 9 0 + 71.675 0.0 0.0 7.058 7.058 90.529 0.0 0.0 0.0 44.22740412802301 2.328441339178184 2.328441339178184 9.208187539523742 0 0.6989700043360187 1.5228787452803376 0.4247425010840047 0.3494850021680094 + + {I|L}PENSM{[QV]|[N{I|L}]|[RA]|[KV]}V;{I|L}PEGGSM{[QV]|[N{I|L}]|[RA]|[KV]}V 7.058;6.1512 +;- + 77 + 1 1.475 64051.4 1.0 3609 5225 8827 HBL1_DMSO_200M_050219_1,8836 HBL1_DMSO_200M_050219_1,8836,LPENSMRAV True True LPENSMRAV 46.455242 508.763201892376 58110516.0 8827.0 nc|ENSG00000131196|O95644-10|NFATC1;;nc|ENSG00000131196|O95644-5|NFATC1;;ENSG00000131196|ENST00000427363|NFATC1;;nc|ENSG00000131196|O95644-11|NFATC1;;nc|ENSG00000131196|O95644-8|NFATC1;;nc|ENSG00000131196|O95644-2|NFATC1;;nc|ENSG00000131196|O95644-6|NFATC1;;nc|ENSG00000131196|O95644-4|NFATC1;;nc|ENSG00000131196|O95644-17|NFATC1;;nc|ENSG00000131196|O95644-3|NFATC1;;chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1 5.671780904134114 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8837 46.457 58.0 1332300.0 25 0 374980.0 + 40558 VKFKVFYN 8 69 522.798158913099 0 522.8014404177666 PEAK CID FTMS 0 0 0 8827 1112328.625 0.6233033555277524 4 -0.3172149658203125 10 Unmodified _VKFKVFYN_ REV__ENSG00000162444|ENST00000294435|RBP7;REV__ENST00000315901.4_1_1:10057339-10075887:+|nuORF 8.593279151180031 0.5573742999696857 3 K{M(Oxidation (M))|F} 2 -1 10.005 0.0 0.0 0.95873 0.0 0.0 99.06122350927758 666.3214815729124 765.38270508219 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 K{M(Oxidation (M))|F} 0.95873 + + 11 + 1 1.475 67604.4 1.0 3610 5225 8827 HBL1_DMSO_200M_050219_1,8837 HBL1_DMSO_200M_050219_1,8837,VKFKVFYN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8838 46.458 24.0 1996100.0 25 0 187660.0 + 44491 YPARAPSVV 9 87 480.26938060268174 958.5242082721636 2 480.2693664431572 MULTI CID FTMS 0 0 0 8827 1024192.9375 0.3648302358437848 2 -0.1320724487304687 11 Unmodified _YPARAPSVV_ ENSG00000197321|ENST00000355867|SVIL;ENST00000422642.6_2_10:30987145-31001569:+|nuORF;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL 27.22323531849824 0.1848086127304535 3 YP 2 7 32.423 0.0 0.0 3.3826 0.0 0.0 0.0 695.3870943658811 695.3870943658811 5.066212630749831 0.0 0.0 0.0 0 0.3494850021680094 1.0969100130080565 0.0 0.0 + YP 3.3826 + + 182 + 1 1.475 43580.7 1.0 3611 5225 8827 HBL1_DMSO_200M_050219_1,8838 HBL1_DMSO_200M_050219_1,8838,YPARAPSVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8839 46.459 47.0 1146700.0 25 0 102210.0 + 3752 DAGVSFDSGPV 11 99 350.8281747415295 1049.4626948247883 3 350.8285095095634 MULTI CID FTMS 0 0 0 8827 1028942.25 0.2637852682784578 -2 0.2388153076171875 12 Unmodified _DAGVSFDSGPV_ REV__ENSG00000152556|ENST00000359794|PFKM;REV__ENST00000547581.5_1_12:48529049-48539488:+|nuORF;REV__ENST00000552818.1_1_12:48535711-48536092:+|nuORF;REV__nc|ENSG00000152556|P08237-2|PFKM;REV__nc|ENSG00000152556|P08237-3|PFKM 10.315234532428624 0.8205777915985574 3 V 1 -1 15.485 0.0 0.0 1.4755 0.0 0.0 932.3831487816228 0.0 932.3831487816228 0.0 4.286662482156343 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4755 + + 111 + 1 1.475 50274.7 1.0 3612 5225 8827 HBL1_DMSO_200M_050219_1,8839 HBL1_DMSO_200M_050219_1,8839,DAGVSFDSGPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8840 46.461 59.0 908200.0 25 0 134530.0 37300 TIRPMYGV 8 76 468.7523884023757 935.4902238715514 2 468.7523681521416 MULTI CID FTMS 0 0 0 8827 835511.875 0.9241052057532336 6 -0.4305801391601562 13 Unmodified _TIRPMYGV_ ENSG00000213689|ENST00000625293|TREX1;nc|ENSG00000213689|Q9NSU2-1|TREX1;nc|ENSG00000213689|Q9NSU2-2|TREX1 6.354104778181461 0.7857632046190106 3 GV 2 6 13.979 0.0 0.0 1.4943 0.0 0.0 761.3891781945968 0.0 761.3891781945968 0.0 -13.873949984654246 -13.873949984654246 0.0 0 0.0 0.0 0.0 0.0 + GV 1.4943 + + 175 + 1 1.475 45578.0 1.0 3613 5225 8827 HBL1_DMSO_200M_050219_1,8840 HBL1_DMSO_200M_050219_1,8840,TIRPMYGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8841 46.464 146.0 608030.0 25 0 45104.0 + -1 MQDDNQVMV 9 115 548.2256476955941 1094.4367424579882 2 548.2261230349541 MULTI CID FTMS 0 0 0 8827 793735.5625 0.9408757727268048 -1 0.1770477294921875 14 Oxidation (M) _M(Oxidation (M))QDDNQVMV_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 38.17557092003332 0.0854718145212029 3 [AG]{M(Oxidation (M))|F}DDNQVMV 10 -1 + 42.24 0.0 0.0 3.8595 3.8595 74.992 0.0 0.0 0.0 3.699112850717931 4.107733688702375 3.699112850717931 3.699112850717931 0 0.6677353201839438 1.2218487496163564 0.3252574989159953 0.6549471895720985 [AG]{M(Oxidation (M))|F}DDNQVMV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DDNQVMV;[{M(Oxidation (M))|F}T]VQNDDC(Carbamidomethyl (C))P;[AG]D{M(Oxidation (M))|F}DNQVMV;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}DNQVMV;[AG]{M(Oxidation (M))|F}DDGGQVMV;[AG]{M(Oxidation (M))|F}DDN[AG]VMV;[AG]NDD{M(Oxidation (M))|F}QVMV;[AG]DND{M(Oxidation (M))|F}QVMV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DDN[AG]VMV 3.8595;3.5215;3.4842;3.4205;3.0825;3.0221;3.0221;2.7288;2.7095;2.6802 -;+;-;-;-;-;-;-;-;- + 572 1 1.475 75649.2 1.0 3614 5225 8827 HBL1_DMSO_200M_050219_1,8841 HBL1_DMSO_200M_050219_1,8841,MQDDNQVMV False False MQDDNQVMV 46.46355 548.226123034954 6536512.5 8827.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 7.234482288360596 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8842 46.466 97.0 622840.0 25 0 51890.0 + 29719 QPLEQNQTI 9 119 535.7773115133887 1069.5400700935772 2 535.7783080935478 MULTI CID FTMS 0 0 0 8827 633225.4375 0.9027227698733012 -1 0.1770477294921875 15 Unmodified _QPLEQNQTI_ ENSG00000163848|ENST00000360647|ZNF148;ENST00000497929.1_1_3:124951187-125011317:-|nuORF 61.357469665136826 0.0253304979873734 3 {[QN]|[E{I|L}]|[KN]}[KP]QN[WR] 8 6 + 32.19 0.0 0.0 3.0097 3.0097 71.298 0.0 0.0 0.0 2.7621415841156605 6.360251751178296 2.7621415841156605 2.7621415841156605 0 0.0 0.958607314841775 1.424742501084005 0.9896518287104438 {[QN]|[E{I|L}]|[KN]}[KP]QN[WR];{[DA]|[EG]}[{I|L}A]PQN[WR];[H{I|L}]E{I|L}[DV]MT{I|L};{[QN]|[E{I|L}]|[KN]}[KP]QGG[WR];{[QN]|[E{I|L}]|[KN]}[KP][AG]N[WR];[H{I|L}]QR[DG]MT{I|L};{[DA]|[EG]}[{I|L}A]PQGG[WR];{[DA]|[EG]}[{I|L}A]P[AG]N[WR];[DP][RV]QN[WR];[H{I|L}][AG]R[DG]MT{I|L} 3.0097;2.7515;2.415;2.1437;2.1437;2.1336;1.8905;1.5864;1.4433;1.2726 -;-;-;-;-;-;-;-;-;- 986 1 1.475 53197.3 1.0 3615 5225 8827 HBL1_DMSO_200M_050219_1,8842 HBL1_DMSO_200M_050219_1,8842,QPLEQNQTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8843 46.468 135.0 580290.0 25 0 59112.0 + 31915 RTYADYESV 9 96 552.2540787953367 1102.4936046574733 2 552.2536498904228 MULTI CID FTMS 0 0 0 8827 624959.5625 1.0 0 0.0 16 Unmodified _RTYADYESV_ ENSG00000100632|ENST00000557016|ERH;ENST00000523006.1_1_7:139218986-139219103:+|nuORF 38.17557092003332 0.0854718145212029 3 [VS]E[YQ]YESV 9 5 + 63.541 0.0 0.0 5.7634 5.7634 85.384 0.0 0.0 0.0 12.64645333192 12.64645333192 12.64645333192 8.010299956639813 0 0.9247425010840048 1.3979400086720375 1.1989700043360187 0.3252574989159953 [VS]E[YQ]YESV;[VS]E[YQ]YTDV;[MT]TYD{[WT]|[RM]}SV;[YE][KA]DYESV;{[CT]|[{M(Oxidation (M))|F}G]}EYD{[WT]|[RM]}SV;[YE][WK]YESV;{[{M(Oxidation (M))|F}C]|[YS]}[Q{I|L}]DYESV;[YE][KA]DYTDV;[YE][WK]YTDV;{[{M(Oxidation (M))|F}C]|[YS]}[Q{I|L}]DYTDV 5.7634;5.0368;4.6163;4.5648;4.4358;4.4099;4.1784;3.8382;3.6834;3.4518 -;-;-;-;-;-;-;-;-;- 172 1 1.475 65110.4 1.0 3616 5225 8827 HBL1_DMSO_200M_050219_1,8843 HBL1_DMSO_200M_050219_1,8843,RTYADYESV True True RTYADYESV 46.468413 552.253649890423 5419200.5 8827.0 ENST00000523006.1_1_7:139218986-139219103:+|nuORF;;ENSG00000100632|ENST00000557016|ERH 4.059401988983154 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8844 46.47 47.0 1165000.0 25 0 212430.0 + 28007 PMPPRTNE 8 72 471.2302739017799 940.4459948703598 2 471.2307006716728 MULTI CID FTMS 0 0 0 8827 521507.0625 0.4424578710937872 9 -0.6855621337890625 17 Unmodified _PMPPRTNE_ REV__ENSG00000101203|ENST00000358894|COL20A1;REV__ENST00000471582.5_1_20:61956720-61961007:+|nuORF;REV__ENST00000479501.5_1_20:61950534-61961007:+|nuORF;REV__nc|ENSG00000101203|Q9P218-2|COL20A1;REV__nc|ENSG00000101203|Q9P218-3|COL20A1 10.823927491677226 0.7510103885582552 3 MPPP 4 -1 47.955 0.0 0.0 5.0992 0.0 0.0 0.0 515.2252291315061 515.2252291315061 37.77392422933776 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 MPPP 5.0992 - 70 + 1 1.475 49134.4 1.0 3617 5225 8827 HBL1_DMSO_200M_050219_1,8844 HBL1_DMSO_200M_050219_1,8844,PMPPRTNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8845 46.473 168.0 437700.0 25 0 22287.0 38713 TTVETFQDLS 10 112 570.7737990233662 1139.5330451135324 2 570.7731811404228 MULTI CID FTMS 0 0 0 8827 460659.84375 1.0 0 0.0 18 Unmodified _TTVETFQDLS_ ENSG00000136878|ENST00000372429|USP20;ENST00000491731.1_1_9:132630652-132632199:+|nuORF 18.1463463914782 0.5430639438673815 3 [PS]V[RD]{[YC]|[HE]}TTV 10 9 + 29.834 0.0 0.0 2.6181 2.6181 77.003 0.0 0.0 0.0 5.224986618758727 5.848396689760087 5.224986618758727 8.578409410397462 0 0.6549471895720985 0.5228787452803376 0.5891368308784531 0.0 [PS]V[RD]{[YC]|[HE]}TTV;[PS]V[RD]{I|L}Y[C(Carbamidomethyl (C))M];{[DS]|[MA]|[CV]|TT}{[HG]|PP}{[CA]|SS}H{I|L}TTV;[VP]S[RD]{[YC]|[HE]}TTV;[PS]V[{M(Oxidation (M))|F}T]D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TV;{[TV]|[{I|L}S]}GHHD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TV;YVG{I|L}H{[CA]|SS}{[HG]|PP}[PS];YR{I|L}H{[CA]|SS}{[HG]|PP}[PS];[PS]V[RD]{[YC]|[HE]}G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[VG]THHD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TV 2.6181;1.8653;1.8481;1.5963;1.5849;1.467;1.3349;1.2862;1.1423;1.022 -;-;-;-;-;-;-;-;-;- 452 1 1.475 61117.4 1.0 3618 5225 8827 HBL1_DMSO_200M_050219_1,8845 HBL1_DMSO_200M_050219_1,8845,TTVETFQDLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8846 46.475 76.0 614920.0 25 0 35350.0 12826 GVTRLLDPEDV 11 69 405.2193658408255 1212.6362681226765 3 405.2198058962822 MULTI CID FTMS 0 0 0 8827 466302.4375 0.021867940908002 4 -0.3172149658203125 19 Unmodified _GVTRLLDPEDV_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 8.155526934196011 0.8366696279279818 3 T{I|L}Y[KA]WTV 8 8 37.74 0.0 0.0 3.1122 0.0 0.0 232.10274796374523 0.0 232.10274796374523 0.0 30.29290666384 0.0 0.0 0 0.0 0.0 0.5 0.0 T{I|L}Y[KA]WTV 3.1122 - 44 + 1 1.475 43356.0 1.0 3619 5225 8827 HBL1_DMSO_200M_050219_1,8846 HBL1_DMSO_200M_050219_1,8846,GVTRLLDPEDV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8847 46.482 410.0 303800.0 25 0 15931.0 + 17945 KQYGITGENV 10 175 554.7853453449497 1107.5561377566994 2 554.7856323122978 MULTI CID FTMS 0 0 0 8827 417034.15625 0.0760074456135631 4 -0.3172149658203125 20 Unmodified _KQYGITGENV_ ENSG00000108465|ENST00000338399|CDK5RAP3;nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 67.83816525789305 0.0190062514522628 3 [KQ]Y{[VA]|[{I|L}G]}TGENV 10 0 + 57.417 0.0 0.0 5.1841 5.1841 75.143 0.0 0.0 0.0 1.2896285377202688 12.000323938380944 1.2896285377202688 1.2896285377202688 0 1.0501648626366045 0.0 0.3807196863200844 1.2887254899964358 + + [KQ]Y{[VA]|[{I|L}G]}TGENV;[YQ]K{[VA]|[{I|L}G]}TGENV;[KG]AY{[VA]|[{I|L}G]}TGENV;[KA]GY{[VA]|[{I|L}G]}TGENV;[KQ]Y{[VA]|[{I|L}G]}TGEGGV;[YQ]K{[VA]|[{I|L}G]}TGEGGV;[YQ]G[K{I|L}]TGENV;[KG]AY{[VA]|[{I|L}G]}TGEGGV;[HA]Q[RP]TWNV;[KQ]Y{[VA]|[{I|L}G]}TGDQV 5.1841;5.0677;5.028;4.8189;4.3567;4.2402;4.2085;4.2038;4.1926;4.1016 +;-;-;-;-;-;-;-;-;- + 4669 1 1.475 99560.9 1.0 3620 5225 8827 HBL1_DMSO_200M_050219_1,8847 HBL1_DMSO_200M_050219_1,8847,KQYGITGENV True True KQYGITGENV 46.482063 554.785632312298 35538524.0 8827.0 nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;;ENSG00000108465|ENST00000338399|CDK5RAP3;;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 6.076680819193522 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8849 46.486 2.9 17535000.0 25 0 4036500.0 + 2629 ASVPKVETV 9 81 465.2685407305399 928.5225285278798 2 465.2686950564384 MULTI CID FTMS 0 0 0 8848 20735282.0 1.0 0 0.0 1 Unmodified _ASVPKVETV_ ENSG00000100664|ENST00000216554|EIF5 25.399314129420983 0.2080152500878129 3 [KP]VETV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 5 + 33.633 0.0 0.0 3.6222 3.6222 76.828 0.0 0.0 0.0 3.290587192642249 11.42667503568731 3.290587192642249 6.020599913279625 0 0.0 0.0 0.4247425010840047 0.0 [KP]VETV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP]VTEV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}[KP]EV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}E[KP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}[PS]{[VA]|[{I|L}G]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.6222;2.9738;0.57509;0.31335;0.22599 -;-;-;-;- 149 1 1.475 43009.0 1.0 3621 5226 8848 HBL1_DMSO_200M_050219_1,8849 HBL1_DMSO_200M_050219_1,8849,ASVPKVETV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8850 46.487 12.0 5230200.0 25 0 1027400.0 + -1 VLRRCEVI 8 49 348.8694118174692 1043.5864060526076 3 348.8696777224541 MULTI CID FTMS 0 0 0 8848 4613244.5 0.9802765134222023 1 -0.0913925170898437 2 Carbamidomethyl (C) _VLRRC(Carbamidomethyl (C))EVI_ REV__ENST00000362003.9_1_4:760631-760760:+|nuORF 14.838274106304384 0.6917062315640577 3 {I|L}V{M(Oxidation (M))|F} 3 -1 26.198 0.0 0.0 2.5104 0.0 0.0 0.0 681.3577069358058 681.3577069358058 15.088643834802156 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V{M(Oxidation (M))|F} 2.5104 - 10 + 1 1.475 56797.5 1.0 3622 5226 8848 HBL1_DMSO_200M_050219_1,8850 HBL1_DMSO_200M_050219_1,8850,VLRRCEVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8851 46.489 12.0 4962400.0 25 0 493560.0 + 43219 WAPIRDGASI 10 74 362.529520375864 1084.566731727792 3 362.5293151736259 MULTI CID FTMS 0 0 0 8848 4245372.5 0.7512205820979758 -2 0.2177276611328125 3 Unmodified _WAPIRDGASI_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 17.11289562659939 0.5604042439455784 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 5 -1 44.565 0.0 0.0 4.109 0.0 0.0 0.0 485.24921594791255 485.24921594791255 24.89909385331508 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.7614393726401688 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 4.109 - 88 + 1 1.475 57235.2 1.0 3623 5226 8848 HBL1_DMSO_200M_050219_1,8851 HBL1_DMSO_200M_050219_1,8851,WAPIRDGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8852 46.49 52.0 1186100.0 25 0 54994.0 33407 SGWPGLLMSC 10 102 525.7386820375046 1049.4628111418092 2 525.7392455935478 MULTI CID FTMS 0 0 0 8848 1239871.25 0.4152457744145703 -1 0.040679931640625 4 Unmodified _SGWPGLLMSC_ ENSG00000212864|ENST00000391553|RNF208 13.90604991867851 0.6142120002215601 3 [DG]AP 4 8 29.922 0.0 0.0 2.8511 0.0 0.0 0.0 706.2984713190061 706.2984713190061 12.931825014007217 0.0 0.0 0.0 0 0.8494850021680094 1.0 0.0 0.0 [DG]AP 2.8511 - 146 + 1 1.475 54326.2 1.0 3624 5226 8848 HBL1_DMSO_200M_050219_1,8852 HBL1_DMSO_200M_050219_1,8852,SGWPGLLMSC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8853 46.492 104.0 820180.0 25 0 133170.0 11273 GEVCCWLCI 9 93 513.2167295470742 1024.4189061609484 2 513.2175170779228 MULTI CID FTMS 0 0 0 8848 663980.5 1.0 0 0.0 5 Unmodified _GEVCCWLCI_ ENSG00000164082|ENST00000395052|GRM2;ENST00000296479.9_1_3:51747995-51752125:+|nuORF 12.531546534597751 0.4974689918368763 3 {[DA]|[EG]}VVE 5 6 29.922 0.0 0.0 2.9208 0.0 0.0 0.0 508.1562468194047 508.1562468194047 3.9128951619087537 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}VVE 2.9208 - 116 1 1.475 70713.5 1.0 3625 5226 8848 HBL1_DMSO_200M_050219_1,8853 HBL1_DMSO_200M_050219_1,8853,GEVCCWLCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8854 46.498 345.0 497080.0 25 0 52674.0 -1 0 103 698.1288100974558 3485.607668154279 5 698.5313598513603 MULTI CID FTMS 0 0 0 8848 636450.0625 0.4620636572576276 -3 0.2794952392578125 6 3 GTP 3 -1 30.445 0.0 0.0 0.87346 0.0 0.0 3212.48285739948 0.0 3212.48285739948 0.0 5.699254436249458 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 GTP 0.87346 - 205 1 1.475 123756.9 1.0 3626 5226 8848 HBL1_DMSO_200M_050219_1,8854 HBL1_DMSO_200M_050219_1,8854, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8855 46.501 130.0 660220.0 25 0 135110.0 21872 LPPESTQV 8 98 435.73190224853386 869.4492515638677 2 435.7317687869072 MULTI CID FTMS 0 0 0 8848 397224.0625 0.7565232368738933 2 -0.1754684448242187 7 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 15.768221252438446 0.6779680726941459 3 V 1 7 15.485 0.0 0.0 1.781 0.0 0.0 752.3696292267568 0.0 752.3696292267568 0.0 -7.680694551991536 -7.680694551991536 0.0 0 0.0 0.0 0.0 0.0 + V 1.781 + + 79 + 1 1.475 71756.2 1.0 3627 5226 8848 HBL1_DMSO_200M_050219_1,8855 HBL1_DMSO_200M_050219_1,8855,LPPESTQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8856 46.504 161.0 561930.0 25 0 41932.0 + 13265 SQAPPMHSL 9 122 484.283036882674 966.551520832148 2 484.2825805544853 MULTI CID FTMS 0 0 0 8848 353265.0 0.5628196905638801 -11 0.9542350769042968 8 Unmodified _HILKDVSGV_ ENSG00000077063|ENST00000160373|CTTNBP2 24.020572477871973 0.2255576514309169 3 [H{I|L}][W{M(Oxidation (M))|F}]PA 6 7 25.691 0.0 0.0 2.6581 0.0 0.0 0.0 212.1585330860551 212.1585330860551 3.4459400514777947 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 [H{I|L}][W{M(Oxidation (M))|F}]PA 2.6581 - 363 1 1.475 72880.5 1.0 3628 5226 8848 HBL1_DMSO_200M_050219_1,8856 HBL1_DMSO_200M_050219_1,8856,HILKDVSGV False True SQAPPMHSL 46.504231 484.282580554485 4288014.0 8848.0 ENSG00000077063|ENST00000160373|CTTNBP2 5.771775404612224 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8857 46.514 552.0 573030.0 25 0 33670.0 + 30676 RFPEHVREI 9 219 394.8839030654239 0 394.8843261599541 PEAK CID FTMS 0 0 0 8848 402454.09375 0.9198116970683158 1 -0.0913925170898437 9 Unmodified _RFPEHVREI_ ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR 31.461819360018414 0.1036922022357412 3 HV 2 7 7.9588 0.0 0.0 1.0103 0.0 0.0 135.38638239745393 413.2163778664095 548.6027602638635 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + HV 1.0103 + + 231 + 1 1.475 249582.1 1.0 3629 5226 8848 HBL1_DMSO_200M_050219_1,8857 HBL1_DMSO_200M_050219_1,8857,RFPEHVREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8858 46.524 562.0 392490.0 25 0 49050.0 -1 0 88 953.9413543670736 1905.8681558009469 2 954.4442626833916 MULTI CID FTMS 0 0 0 8848 315170.8125 0.6205318311968069 -1 0.040679931640625 10 3 VRE 3 -1 22.747 0.0 0.0 1.1935 0.0 0.0 1156.5360157636403 362.1093844049438 1518.6454001685845 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.4247425010840047 VRE 1.1935 - 66 + 1 1.475 156151.5 1.0 3630 5226 8848 HBL1_DMSO_200M_050219_1,8858 HBL1_DMSO_200M_050219_1,8858, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8859 46.533 514.0 226690.0 25 0 13180.0 34287 SLQVLAQVLEQ 11 92 614.3531318067814 0 614.3549072146416 PEAK CID FTMS 0 0 0 8848 220264.5 1.0 0 0.0 11 Unmodified _SLQVLAQVLEQ_ ENSG00000124074|ENST00000243878|ENKD1;ENST00000602642.1_1_16:67697561-67697729:-|nuORF;nc|ENSG00000124074|Q9H0I2-2|ENKD1 16.149105407346934 0.3934762919021404 3 {I|L}WVT 4 9 30.107 0.0 0.0 2.4543 0.0 0.0 500.28596224461904 224.10491357974848 724.3908758243675 0.0 0.0 0.0 0.0 0 0.0 0.0 1.055462187404089 0.0 {I|L}WVT 2.4543 - 234 + 1 1.475 91645.5 1.0 3631 5226 8848 HBL1_DMSO_200M_050219_1,8859 HBL1_DMSO_200M_050219_1,8859,SLQVLAQVLEQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8860 46.542 544.0 135460.0 25 0 16553.0 8257 EQHQGQEEGYF 11 124 676.2813378163182 0 676.2800170779228 PEAK CID FTMS 0 0 0 8848 210052.9375 0.9213112684636436 1 -0.0913925170898437 12 Unmodified _EQHQGQEEGYF_ ENSG00000197808|ENST00000588268|ZNF461;nc|ENSG00000197808|Q8TAF7-2|ZNF461 22.736283301280096 0.3186971331110387 3 WQQ[HD]{M(Oxidation (M))|F} 6 8 28.611 0.0 0.0 2.1185 0.0 0.0 328.14241466344725 178.05161462955314 506.1940292930004 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0189301784845295 1.2302046884880935 WQQ[HD]{M(Oxidation (M))|F} 2.1185 - 767 + 1 1.475 57121.5 1.0 3632 5226 8848 HBL1_DMSO_200M_050219_1,8860 HBL1_DMSO_200M_050219_1,8860,EQHQGQEEGYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8861 46.552 572.0 113330.0 25 0 8156.5 -1 EYVATLDYCRK 11 87 709.3405460083161 0 709.3406860232353 PEAK CID FTMS 0 0 0 8848 202721.609375 1.0 0 0.0 13 Carbamidomethyl (C) _EYVATLDYC(Carbamidomethyl (C))RK_ ENSG00000150961|ENST00000280551|SEC24D;nc|ENSG00000150961|O94855-2|SEC24D 17.11289562659939 0.3845757490720307 3 VAEVC(Carbamidomethyl (C)) 5 -1 22.039 0.0 0.0 1.5557 0.0 0.0 726.3561885969071 129.05611597232658 855.4123045692337 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 VAEVC(Carbamidomethyl (C)) 1.5557 - 294 + 1 1.475 53785.6 1.0 3633 5226 8848 HBL1_DMSO_200M_050219_1,8861 HBL1_DMSO_200M_050219_1,8861,EYVATLDYCRK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8862 46.564 582.0 128930.0 25 0 17167.0 + 527 AEIANEENEIK 11 114 630.3079101443291 0 630.3079101443291 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _AEIANEENEIK_ REV__ENSG00000120800|ENST00000261637|UTP20 15.248480904072842 0.4017935032673427 3 VEAE 4 -1 22.559 0.0 0.0 1.7924 0.0 0.0 646.2921986072143 181.0988710992797 827.391069706494 0.0 0.0 0.0 0.0 0 0.0 0.0 1.024227503252014 0.0 VEAE 1.7924 - 162 + 1 1.475 62059.6 1.0 3634 5226 8848 HBL1_DMSO_200M_050219_1,8862 HBL1_DMSO_200M_050219_1,8862,AEIANEENEIK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8863 46.574 551.0 249290.0 25 0 39366.0 -1 LVMVCRPVFP 10 126 588.8184547503355 1175.622356567471 2 588.8188964724541 MULTI CID FTMS 0 0 0 8848 108864.09375 0.5119546930550591 -3 0.2794952392578125 15 Oxidation (M) _LVM(Oxidation (M))VCRPVFP_ ENST00000495036.5_1_7:120629669-120690919:+|nuORF 11.640296217721598 0.652229146672156 3 [Y{I|L}]V{M(Oxidation (M))|F}[{I|L}T]{M(Oxidation (M))|F}HH 9 -1 + 18.082 0.0 0.0 1.5381 1.5381 68.83 0.0 0.0 0.0 2.1600334363479945 2.1600334363479945 2.1600334363479945 2.1600334363479945 0 0.0 0.6989700043360187 0.0 0.0 [Y{I|L}]V{M(Oxidation (M))|F}[{I|L}T]{M(Oxidation (M))|F}HH;{I|L}YY[{I|L}T]{M(Oxidation (M))|F}{M(Oxidation (M))|F}P{I|L};[{I|L}V]Y{M(Oxidation (M))|F}[{I|L}T]{M(Oxidation (M))|F}HH;{I|L}YY[{I|L}T]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}P;[YV]{I|L}{M(Oxidation (M))|F}[{I|L}T]{M(Oxidation (M))|F}HH;{I|L}YY[{I|L}T]{M(Oxidation (M))|F}{I|L}M{I|L};{I|L}YY[{I|L}T]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}P;[Y{I|L}]V{[HG]|PP}[WK]HH;[{I|L}V]Y{[HG]|PP}[WK]HH 1.5381;1.3544;1.2962;1.2894;0.79375;0.5232;0.45823;0.24853;0.0065869 -;-;-;-;-;-;-;-;- 402 1 1.475 108183.8 1.0 3635 5226 8848 HBL1_DMSO_200M_050219_1,8863 HBL1_DMSO_200M_050219_1,8863,LVMVCRPVFP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8865 46.578 6.9 5150300.0 25 0 1472900.0 + 38816 TVFSHAQTV 9 60 495.2564672204266 988.4983815076532 2 495.2566100955009 MULTI CID FTMS 0 0 0 8864 6695445.5 0.5037214222942724 1 -0.084075927734375 1 Unmodified _TVFSHAQTV_ ENSG00000177954|ENST00000651669|RPS27;ENSG00000185088|ENST00000330964|RPS27L;ENST00000482846.1_1_15:63447754-63448774:-|nuORF 34.40172386719151 0.1061884637610825 3 [HA]YAQTV{[TV]|[{I|L}S]} 9 7 + 39.767 0.0 0.0 4.0229 4.0229 70.109 0.0 0.0 0.0 0.5115252244738144 3.652792693512417 0.5115252244738144 0.5115252244738144 0 0.3807196863200844 0.0 0.805462187404089 0.0 [HA]YAQTV{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DP]V{[TV]|[{I|L}S]};[HA]YA[AG]TV{[TV]|[{I|L}S]};[HA]Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TV{[TV]|[{I|L}S]};[HA]YA{[TV]|[{I|L}S]}Q{[TV]|[{I|L}S]};[HA]YA{[TV]|[{I|L}S]}E[KA];[HA][AG]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TV{[TV]|[{I|L}S]};[HA]YA{[TV]|[{I|L}S]}[AG]{[TV]|[{I|L}S]} 4.0229;3.9712;3.0914;1.9479;1.5182;1.1505;1.0164;0.5867 -;-;-;-;-;-;-;- 90 1 1.456 33834.3 1.0 3636 5227 8864 HBL1_DMSO_200M_050219_1,8865 HBL1_DMSO_200M_050219_1,8865,TVFSHAQTV True True TVFSHAQTV 46.577606 495.256610095501 156992672.0 8864.0 ENSG00000185088|ENST00000330964|RPS27L;;ENSG00000177954|ENST00000651669|RPS27;;ENST00000482846.1_1_15:63447754-63448774:-|nuORF 6.902525583902995 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8866 46.579 18.0 1818600.0 25 0 314600.0 -1 ECKECRKCFY 10 52 711.7993234013727 1421.5840938695453 2 711.8000976443291 MULTI CID FTMS 0 0 0 8864 3289812.25 0.8253668136940434 1 -0.084075927734375 2 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFY_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 6.723162845929126 0.6955379296933136 3 ADQQA[HD]{M(Oxidation (M))|F}Y 9 -1 52.669 0.0 0.0 3.7049 0.0 0.0 328.14064337037377 0.0 328.14064337037377 0.0 52.668884535972325 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.4247425010840047 ADQQA[HD]{M(Oxidation (M))|F}Y 3.7049 - 167 + 1 1.456 27317.4 1.0 3637 5227 8864 HBL1_DMSO_200M_050219_1,8866 HBL1_DMSO_200M_050219_1,8866,ECKECRKCFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8867 46.58 34.0 1550100.0 25 0 414460.0 + 45948 YYYDTHTNTY 10 57 670.7748412146086 1339.5351294960171 2 670.7755004763603 MULTI CID FTMS 0 0 0 8864 1691406.125 0.4421839807054343 -1 0.0913925170898437 3 Unmodified _YYYDTHTNTY_ ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2 45.69961567697781 0.105390671673896 3 YYYQNTYYY 9 5 + 59.842 0.0 0.0 4.4674 4.4674 74.984 0.0 0.0 0.0 2.7545373444029053 7.504311474114331 2.7545373444029053 2.7545373444029053 0 1.048455006504028 2.0 0.7742275032520141 0.3252574989159953 YYYQNTYYY;YYYYNG{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;YYYQGGTYYY;[HT]{[YD]|[{M(Oxidation (M))|F}M]}TNTYYY;{[QS]|[NT]}[WD]TNTYYY;YYYH{[QS]|[NT]}[WM]Y;[HT]T{[YD]|[{M(Oxidation (M))|F}M]}NTYYY;[HT]{[YD]|[{M(Oxidation (M))|F}M]}TGGTYYY;{[QS]|[NT]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}ENTYYY;{[QS]|[NT]}[WD]TGGTYYY 4.4674;4.2617;3.7799;3.6305;3.181;3.1251;3.0134;2.7035;2.6954;2.4969 -;-;-;-;-;-;-;-;-;- 363 1 1.456 45322.3 1.0 3638 5227 8864 HBL1_DMSO_200M_050219_1,8867 HBL1_DMSO_200M_050219_1,8867,YYYDTHTNTY True True YYYDTHTNTY 46.579964 670.77550047636 48668688.0 8864.0 ENSG00000064651|ENST00000262461|SLC12A2;;nc|ENSG00000064651|P55011-3|SLC12A2 7.208137035369873 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8868 46.582 89.0 799570.0 25 0 287180.0 + 43735 YDPAEPKHQGS 11 75 410.1917460056978 1227.5534086172936 3 410.1920349001884 MULTI CID FTMS 0 0 0 8864 1101824.75 0.7168596488260369 -1 0.0913925170898437 4 Unmodified _YDPAEPKHQGS_ REV__ENSG00000116996|ENST00000366570|ZP4 10.315234532428624 0.8205777915985574 3 {I|L}DY{I|L} 4 -1 18.136 0.0 0.0 1.4774 0.0 0.0 705.2882851815499 0.0 705.2882851815499 0.0 7.65153777800478 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DY{I|L} 1.4774 - 39 + 1 1.456 61342.5 1.0 3639 5227 8864 HBL1_DMSO_200M_050219_1,8868 HBL1_DMSO_200M_050219_1,8868,YDPAEPKHQGS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8869 46.584 76.0 1495000.0 25 0 213990.0 + 4979 DGRQFPKV 8 125 316.17508506603326 0 316.1750366091728 PEAK CID FTMS 0 0 0 8864 801635.25 1.0 0 0.0 5 Unmodified _DGRQFPKV_ ENSG00000111641|ENST00000322166|NOP2;ENST00000536506.5_1_12:6669839-6672276:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 15.847184025352805 0.4758297917908462 3 QCPG 4 6 9.5526 0.0 0.0 1.5155 0.0 0.0 174.1282635385134 68.0514162652953 242.1796798038087 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QCPG 1.5155 - 53 + 1 1.456 94510.7 1.0 3640 5227 8864 HBL1_DMSO_200M_050219_1,8869 HBL1_DMSO_200M_050219_1,8869,DGRQFPKV False True DGRQFPKV 46.583672 316.175036609173 7005691.5 8864.0 ENSG00000111641|ENST00000322166|NOP2;;nc|ENSG00000111641|P46087-2|NOP2;;ENST00000536506.5_1_12:6669839-6672276:-|nuORF;;nc|ENSG00000111641|P46087-4|NOP2;;nc|ENSG00000111641|P46087-3|NOP2 2.34473450978597 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8870 46.589 274.0 787750.0 25 0 41120.0 + -1 MAQEGLREV 9 186 516.301402801404 515.294126334804 1 516.3019897341728 MULTI CID FTMS 0 0 0 8864 758743.5625 0.1741032973092293 3 -0.2330322265625 6 nc|ENSG00000123338|P55160-2|NCKAP1L;ENSG00000123338|ENST00000293373|NCKAP1L 3 [QP]PP 4 -1 13.174 0.0 0.0 2.5566 0.0 0.0 0.0 93.05405000107274 93.05405000107274 2.993039183255138 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6976212463643423 [QP]PP 2.5566 - 109 1 1.456 166680.2 1.0 3641 5227 8864 HBL1_DMSO_200M_050219_1,8870 HBL1_DMSO_200M_050219_1,8870, False False MAQEGLREV 46.588743 516.301989734173 0.0 8864.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 3.2331305344899497 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8871 46.594 311.0 328700.0 25 0 56616.0 -1 EVYCLDDFY 9 99 612.251805441265 1222.48905794933 2 612.2525512576103 MULTI CID FTMS 0 0 0 8864 603948.6875 0.5146332505823934 2 -0.1851425170898437 7 Carbamidomethyl (C) _EVYC(Carbamidomethyl (C))LDDFY_ ENSG00000162458|ENST00000375766|FBLIM1;ENST00000312173.5_1_11:46164605-46165142:+|nuORF;nc|ENSG00000162458|Q8WUP2-2|FBLIM1;nc|ENSG00000162458|Q8WUP2-3|FBLIM1 23.1484247019978 0.2366544122328345 3 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 -1 + 100.35 0.0 0.0 8.209 8.209 92.974 0.0 0.0 0.0 7.269987279362624 86.53282563025877 7.269987279362624 9.164539485499262 0 1.274227503252014 0.0 1.4604093769761874 1.1861818737241734 [HD]EAQQDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QEHQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAEHQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}AADHQDA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QEH[AG]DA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AEHQDA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]DA{M(Oxidation (M))|F}Y 8.209;7.4594;7.4594;6.6887;6.6548;6.4826;6.1431;5.939;5.9109;5.7424 -;-;-;-;-;-;-;-;-;- 1228 1 1.456 80222.6 1.0 3642 5227 8864 HBL1_DMSO_200M_050219_1,8871 HBL1_DMSO_200M_050219_1,8871,EVYCLDDFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8872 46.601 361.0 463050.0 25 0 43417.0 + 20799 LLVVYPWTQR 10 105 637.8665177237659 1273.7184825143318 2 638.3690673708916 MULTI CID FTMS 0 0 0 8864 452041.375 0.3275157217610111 3 -0.2330322265625 8 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 71.70789743142352 0.0188816056000227 3 {I|L}{I|L}VVYPWTQR 10 0 + 96.439 0.0 0.0 7.5714 7.5714 91.652 0.0 0.0 0.0 32.01667520279372 15.964689547372371 15.964689547372371 9.164539485499247 0 1.424742501084005 1.6989700043360187 0.3494850021680094 1.2302046884880935 + + {I|L}{I|L}VVYPWTQR;{I|L}{I|L}VVYPWT[AG]R;{I|L}{I|L}VVYPWSAAR;{I|L}{I|L}VVYP{NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}P;{I|L}{I|L}VVYP{[CP]|[EA]}[KS]R;{I|L}{I|L}VVYP{NN|[MP]|[D{I|L}]|[EV]}VM{I|L};{I|L}{I|L}VVYP[MN]{[VA]|[{I|L}G]}R;{I|L}{I|L}VVYP[MN][KT]P;{I|L}{I|L}VVYP[MN]{[NV]|[RG]}{I|L};{I|L}{I|L}VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[DS]|[MA]|[CV]|TT}TQR 7.5714;6.8519;6.7372;6.318;6.1099;6.047;5.6351;5.555;5.0095;4.81 +;-;-;-;-;-;-;-;-;- + 497 + 1 1.456 127566.4 1.0 3643 5227 8864 HBL1_DMSO_200M_050219_1,8872 HBL1_DMSO_200M_050219_1,8872,LLVVYPWTQR True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8873 46.603 82.0 643530.0 25 0 43210.0 + 32639 SAYRTLNRI 9 73 365.2087397918349 1092.6043899757046 3 365.2081786990166 MULTI CID FTMS 0 0 0 8864 441864.1875 1.0 0 0.0 9 Unmodified _SAYRTLNRI_ ENSG00000266472|ENST00000614145|MRPS21 10.315234532428624 0.5574619466407732 3 SAYR 4 5 52.779 0.0 0.0 4.8306 0.0 0.0 0.0 612.3482760065061 612.3482760065061 43.10170903025782 0.0 0.0 0.0 0 0.5356668758921829 2.0 0.0 0.0 + SAYR 4.8306 + + 54 + 1 1.456 51229.4 1.0 3644 5227 8864 HBL1_DMSO_200M_050219_1,8873 HBL1_DMSO_200M_050219_1,8873,SAYRTLNRI False True SAYRTLNRI 46.602795 365.208178699017 2516459.75 8864.0 ENSG00000266472|ENST00000614145|MRPS21 1.1193928321202595 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8874 46.612 518.0 338930.0 25 0 17643.0 -1 0 119 1037.974445800579 2073.934338667958 2 1038.479052722454 MULTI CID FTMS 0 0 0 8864 345460.0 0.3380112461681915 3 -0.2330322265625 10 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{M(Oxidation (M))|F}{M(Oxidation (M))|F}GD{I|L}ST[DP]AV{M(Oxidation (M))|F}GNPK 19 -1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{M(Oxidation (M))|F} + + 86.779 27.369 5.3642 4.1843 4.1843 53.063 0.0 0.0 0.0 0.0 46.644177247800144 0.0 0.0 0 1.7803695511246982 0.0 0.6989700043360187 0.3494850021680094 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{M(Oxidation (M))|F}{M(Oxidation (M))|F}GD{I|L}ST[DP]AV{M(Oxidation (M))|F}GNPK 4.1843 - 19030 + 1 1.456 118662.2 1.0 3645 5227 8864 HBL1_DMSO_200M_050219_1,8874 HBL1_DMSO_200M_050219_1,8874, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8875 46.619 405.0 334230.0 25 0 27946.0 + 18532 KYQSPVRVY 9 132 570.3128789861738 1138.6112050391475 2 570.3146240115166 MULTI CID FTMS 0 0 0 8864 294969.96875 1.0 0 0.0 11 Unmodified _KYQSPVRVY_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000588696.5_1_17:75139678-75139750:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1 41.95555342248728 0.0647214845423414 3 KYQS 4 5 56.428 0.0 0.0 4.9559 0.0 0.0 0.0 629.3419022997762 629.3419022997762 29.51667520279372 0.0 0.0 0.0 0 1.274227503252014 0.0 0.3252574989159953 0.8494850021680094 + KYQS 4.9559 + + 375 + 1 1.456 104768.3 1.0 3646 5227 8864 HBL1_DMSO_200M_050219_1,8875 HBL1_DMSO_200M_050219_1,8875,KYQSPVRVY True True KYQSPVRVY 46.619204 570.314624011517 2485960.75 8864.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENST00000588696.5_1_17:75139678-75139750:+|nuORF;;ENSG00000129657|ENST00000436233|SEC14L1 3.905450582504273 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8876 46.627 423.0 757830.0 25 0 76675.0 31740 RRTVALTPL 9 186 513.8244966602298 1025.6344403872597 2 513.8239013552666 MULTI CID FTMS 0 0 0 8864 284219.25 0.7664640098376894 2 -0.1851425170898437 12 Unmodified _RRTVALTPL_ ENST00000409594.5_1_2:220073936-220074341:+|nuORF 18.1463463914782 0.3454829746528889 3 [HV]QNM{I|L} 6 7 42.357 0.0 0.0 4.1298 0.0 0.0 0.0 300.2581946199345 300.2581946199345 19.12786809457185 0.0 0.0 0.0 0 0.0 2.0 0.0 0.6237125054200234 [HV]QNM{I|L} 4.1298 - 2026 1 1.456 243317.0 1.0 3647 5227 8864 HBL1_DMSO_200M_050219_1,8876 HBL1_DMSO_200M_050219_1,8876,RRTVALTPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8877 46.636 506.0 72395.0 25 0 3203.1 + -1 EVEETEMDWLI 11 89 705.3091308474541 0 705.3091308474541 PEAK CID FTMS 0 0 0 -1 0 13 Oxidation (M) _EVEETEM(Oxidation (M))DWLI_ REV__ENSG00000120868|ENST00000551964|APAF1;REV__nc|ENSG00000120868|O14727-2|APAF1;REV__nc|ENSG00000120868|O14727-3|APAF1;REV__nc|ENSG00000120868|O14727-4|APAF1;REV__nc|ENSG00000120868|O14727-5|APAF1 5.731851221503515 0.47618401536486 3 EY 2 -1 10.969 0.0 0.0 0.77872 0.0 0.0 257.10182995487054 856.3726900690061 1113.4745200238767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EY 0.77872 - 20 + 1 1.456 32272.8 1.0 3648 5227 8864 HBL1_DMSO_200M_050219_1,8877 HBL1_DMSO_200M_050219_1,8877,EVEETEMDWLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8878 46.645 481.0 180040.0 25 0 12186.0 + 15039 ILVVGGGLMFHK 12 97 643.8656870820383 1285.7168212308766 2 643.8669311404228 MULTI CID FTMS 0 0 0 8864 189350.59375 0.2896616010465111 3 -0.2330322265625 14 Unmodified _ILVIFYFQIM_ ENSG00000113812|ENST00000335754|ACTR8;nc|ENSG00000113812|Q9H981-3|ACTR8;nc|ENSG00000113812|Q9H981-2|ACTR8 15.847184025352805 0.5816416552707754 3 {I|L}{I|L}VVY 5 6 52.703 0.0 0.0 4.0991 0.0 0.0 0.0 695.3278619990524 695.3278619990524 23.76287494579977 0.0 0.0 0.0 0 1.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}{I|L}VVY 4.0991 - 197 + 1 1.456 73572.2 1.0 3649 5227 8864 HBL1_DMSO_200M_050219_1,8878 HBL1_DMSO_200M_050219_1,8878,ILVIFYFQIM False False ILVVGGGLMFHK 46.645397 643.866931140423 8022507.0 8864.0 ENSG00000113812|ENST00000335754|ACTR8;;nc|ENSG00000113812|Q9H981-3|ACTR8;;nc|ENSG00000113812|Q9H981-2|ACTR8 -0.3903757731119792 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8879 46.658 698.0 60575.0 25 0 13396.0 -1 0 41 1111.4682187284145 0 1111.796801745892 PEAK CID FTMS 0 0 0 8864 117052.0390625 0.6787258944476039 -1 0.0913925170898437 15 3 G 1 -1 6.9897 0.0 0.0 0.31472 0.0 0.0 835.2387313027292 1325.6476134825048 2160.886344785234 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.31472 - 3 + 1 1.456 43924.3 1.0 3650 5227 8864 HBL1_DMSO_200M_050219_1,8879 HBL1_DMSO_200M_050219_1,8879, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8881 46.67 506.0 65272.0 25 0 2818.7 40008 VGEIVRRFERK 11 78 694.9075805544853 0 694.9075805544853 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _VGEIVRRFERK_ ENSG00000103024|ENST00000219302|NME3;ENST00000566600.1_1_16:1821268-1821535:-|nuORF 1.3295316138638542 0.4761840153648598 3 G 1 10 3.0989 0.0 0.0 0.2233 0.0 0.0 1102.6675037829957 225.08875452213127 1327.7562583051267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 0.2233 + + 11 + 1 1.437 31418.7 1.0 3651 5228 8880 HBL1_DMSO_200M_050219_1,8881 HBL1_DMSO_200M_050219_1,8881,VGEIVRRFERK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8882 46.671 39.0 1024500.0 25 0 135200.0 + 13891 HVQNMIKGV 9 63 513.2811849691793 1024.5478170051583 2 513.2814819216728 MULTI CID FTMS 0 0 0 8880 1734064.875 1.0 0 0.0 2 Unmodified _HVQNMIKGV_ ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000514842.5_1_4:39459094-39460113:-|nuORF;ENST00000561773.1_1_15:66671752-66672088:-|nuORF 26.88365393820708 0.1891292719743517 3 [HV]QNM{I|L} 6 3 47.396 0.0 0.0 4.626 0.0 0.0 0.0 299.1708337931661 299.1708337931661 40.406075122407685 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + [HV]QNM{I|L} 4.626 + + 78 1 1.437 36533.7 1.0 3652 5228 8880 HBL1_DMSO_200M_050219_1,8882 HBL1_DMSO_200M_050219_1,8882,HVQNMIKGV False True HVQNMIKGV 46.670872 513.281481921673 20140708.0 8880.0 ENSG00000163682|ENST00000295955|RPL9;;ENST00000514842.5_1_4:39459094-39460113:-|nuORF;;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;;ENST00000561773.1_1_15:66671752-66672088:-|nuORF;;ENST00000439124.1_1_6:64325734-64326112:-|nuORF 6.190376917521159 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8883 46.676 252.0 425870.0 25 0 46710.0 + 17147 KLIDRTESL 9 107 537.8116103739832 1073.6086678147662 2 537.8112060427666 MULTI CID FTMS 0 0 0 8880 804774.0 1.0 0 0.0 3 Unmodified _KLIDRTESL_ ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1 57.10758569107544 0.0276834916274374 3 K{I|L}{I|L}D{M(Oxidation (M))|F} 5 5 66.063 0.0 0.0 6.1533 0.0 0.0 0.0 454.24091516666255 454.24091516666255 50.26084705832169 0.0 0.0 0.0 0 1.6237125054200234 0.9208187539523752 0.805462187404089 0.0 K{I|L}{I|L}D{M(Oxidation (M))|F} 6.1533 - 96 + 1 1.437 85582.2 1.0 3653 5228 8880 HBL1_DMSO_200M_050219_1,8883 HBL1_DMSO_200M_050219_1,8883,KLIDRTESL True True KLIDRTESL 46.675576 537.8123 4557937.0 8880.0 ENSG00000130592|ENST00000311604|LSP1;;nc|ENSG00000130592|P33241-3|LSP1;;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;;nc|ENSG00000130592|P33241-2|LSP1 4.463072141011556 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8884 46.682 347.0 260000.0 25 0 23001.0 + 5670 DPFSVKRNV 9 136 531.2907570998029 1060.5669612664058 2 531.7920410037041 MULTI CID FTMS 0 0 0 8880 418454.84375 0.9281599330033546 -1 0.084075927734375 4 Unmodified _DPFSVKRNV_ ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3-2|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4 43.77239144664712 0.0547478964384323 3 [DP]{M(Oxidation (M))|F}SVK 6 3 47.195 0.0 0.0 4.45 0.0 0.0 0.0 384.20029627017817 384.20029627017817 15.150438258193065 0.0 0.0 0.0 0 1.045114016114533 2.0 0.0 0.0 + [DP]{M(Oxidation (M))|F}SVK 4.45 + + 193 + 1 1.437 73942.2 1.0 3654 5228 8880 HBL1_DMSO_200M_050219_1,8884 HBL1_DMSO_200M_050219_1,8884,DPFSVKRNV True True DPFSVKRNV 46.681866 531.792041003704 5250201.5 8880.0 nc|ENSG00000134744|Q5TAX3|TUT4;;ENSG00000134744|ENST00000257177|TUT4;;nc|ENSG00000134744|Q5TAX3-2|TUT4 7.487370491027832 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8885 46.688 355.0 183500.0 25 0 23166.0 + 2739 ATIGDVKGDEV 11 90 552.2816019429664 1102.5486509527327 2 552.2831909060478 MULTI CID FTMS 0 0 0 8880 381228.4375 0.624403136646481 -1 0.084075927734375 5 Unmodified _ATIGDVKGDEV_ ENSG00000102098|ENST00000251900|SCML2 26.020703789607367 0.4812285719068541 3 [TA]GA[{M(Oxidation (M))|F}V]VDG{I|L}[PG] 12 8 + 49.704 0.0 0.0 4.5081 4.5081 73.888 0.0 0.0 0.0 2.8322024793624365 34.71204183794829 2.8322024793624365 1.8406018872695569 0 0.0 1.6989700043360187 0.8945990182825423 0.0 [TA]GA[{M(Oxidation (M))|F}V]VDG{I|L}[PG];[TA]Q[{M(Oxidation (M))|F}V]VDG{I|L}[PG];[TA]{I|L}GDV[{M(Oxidation (M))|F}V]A[NP];[TA]GA[{M(Oxidation (M))|F}V][RD]{I|L}[PG];[TA]Q[{M(Oxidation (M))|F}V][RD]{I|L}[PG];[TA]GA[{M(Oxidation (M))|F}V]V{[RE]|[WV]}[PG];[TA]GA[RD]EV{[RE]|[WV]};[TA]{I|L}[RD][{M(Oxidation (M))|F}V]A[NP];[TA]Q[{M(Oxidation (M))|F}V]V{[RE]|[WV]}[PG];[TA]Q[RD]EV{[RE]|[WV]} 4.5081;4.3412;4.1521;2.7538;2.5902;2.4768;2.4657;2.4011;2.3131;2.306 -;-;-;-;-;-;-;-;-;- 509 1 1.437 55394.6 1.0 3655 5228 8880 HBL1_DMSO_200M_050219_1,8885 HBL1_DMSO_200M_050219_1,8885,ATIGDVKGDEV False True ATIGDVKGDEV 46.688274 552.283190906048 3764425.75 8880.0 ENSG00000102098|ENST00000251900|SCML2 6.174020131429036 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8886 46.696 415.0 130850.0 25 0 7160.1 + 5659 DPFAGRNV 8 98 438.22199548516943 874.4294380371389 2 438.2220641970634 MULTI CID FTMS 0 0 0 8880 358864.28125 1.0 0 0.0 6 Unmodified _DPFAGRNV_ ENSG00000111877|ENST00000619706|MCM9;ENST00000436788.2_1_6:119234457-119238897:-|nuORF;nc|ENSG00000111877|Q9NXL9-2|MCM9;nc|ENSG00000111877|Q9NXL9-3|MCM9 21.74664581756881 0.5868176546531598 3 DP{M(Oxidation (M))|F}A 4 4 59.68 0.0 0.0 6.8251 0.0 0.0 0.0 441.22236047916255 441.22236047916255 48.26049201085526 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + DP{M(Oxidation (M))|F}A 6.8251 + + 47 + 1 1.437 45278.6 1.0 3656 5228 8880 HBL1_DMSO_200M_050219_1,8886 HBL1_DMSO_200M_050219_1,8886,DPFAGRNV False True DPFAGRNV 46.695672 438.222064197063 1718424.5 8880.0 nc|ENSG00000111877|Q9NXL9-3|MCM9;;nc|ENSG00000111877|Q9NXL9-2|MCM9;;ENSG00000111877|ENST00000619706|MCM9;;ENST00000436788.2_1_6:119234457-119238897:-|nuORF 4.500951290130615 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8887 46.699 149.0 366020.0 25 0 119290.0 -1 VTPGDPGA 8 66 378.1821350554985 754.3497171777971 2 378.1819946169853 MULTI CID FTMS 0 0 0 8880 328661.875 0.7855090585935514 -1 0.084075927734375 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VTPGDPGA_ ENST00000340738.9_2_14:73711373-73716709:+|nuORF;ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 5.760428011301431 0.7893668129297577 3 {[YC]|[HE]}D{I|L}E{I|L} 6 -1 + 11.717 0.0 0.0 1.5532 1.5532 70.231 0.0 0.0 0.0 1.0035454493738722 1.2323329021772462 1.0035454493738722 3.0102999566398125 0 0.0317183090963749 0.0 0.3494850021680094 0.0 {[YC]|[HE]}D{I|L}E{I|L};{[YC]|[HE]}{I|L}DE{I|L} 1.5532;1.1542 -;- 31 1 1.437 48375.9 1.0 3657 5228 8880 HBL1_DMSO_200M_050219_1,8887 HBL1_DMSO_200M_050219_1,8887,VTPGDPGA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8888 46.706 412.0 589440.0 25 0 60056.0 + -1 SQPCAIASL 9 177 473.7368276044143 945.4591022756288 2 473.7371093630791 MULTI CID FTMS 0 0 0 8880 320382.625 0.27805180905119 -2 0.1754684448242187 8 Carbamidomethyl (C) _SQPC(Carbamidomethyl (C))AIASL_ REV__ENSG00000179059|ENST00000326866|ZFP42 30.63653989081413 0.1413794767160703 3 {[QS]|[NT]}PVHA{I|L}P 8 -1 31.023 0.0 0.0 3.2813 0.0 0.0 0.0 112.9996655903349 112.9996655903349 18.548666967874155 0.0 0.0 0.0 0 0.6237125054200234 1.0457574905606752 0.5114393726401688 0.3252574989159953 {[QS]|[NT]}PVHA{I|L}P 3.2813 - 1234 1 1.437 186761.2 1.0 3658 5228 8880 HBL1_DMSO_200M_050219_1,8888 HBL1_DMSO_200M_050219_1,8888,SQPCAIASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8889 46.715 492.0 144100.0 25 0 16768.0 + + -1 ASNDYTQQATQSYG 14 99 788.3313160096865 1574.6480790861729 2 788.3317748904228 MULTI CID FTMS 0 0 0 8880 259622.390625 0.1588148094424878 -3 0.2161483764648437 9 Oxidation (M) _YSYM(Oxidation (M))RDYYDRQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 1.3295316138638542 0.8688751186870782 3 [DN]{[CP]|[EA]}YT[VP]M 9 -1 36.787 0.0 0.0 2.3362 0.0 0.0 0.0 551.2095807644365 551.2095807644365 17.094013072432336 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.5044321917401078 0.7059771852360797 [DN]{[CP]|[EA]}YT[VP]M 2.3362 - 872 1 1.437 55964.6 1.0 3659 5228 8880 HBL1_DMSO_200M_050219_1,8889 HBL1_DMSO_200M_050219_1,8889,YSYMRDYYDRQ False False ASNDYTQQATQSYG 46.714695 788.331774890423 25172692.0 8880.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 7.072734673817952 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8890 46.723 422.0 254410.0 25 0 14001.0 + 17357 KLYGNDFSQT 10 134 586.7828171976731 1171.5510814621462 2 586.7814819216728 MULTI CID FTMS 0 0 0 8880 243919.96875 0.5586413375776713 -1 0.084075927734375 10 Unmodified _KLYGNDFSQT_ chr19:42092134-42093829|48|27.9|0.5|5.79|-|ENST00000529067|POU2F2,POU2F2;chr19:42099821-42116709|41|13.12|0.46|4.84|-|ENST00000526831|POU2F2,POU2F2;chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2;ENSG00000028277|ENST00000692977|POU2F2;ENSG00000137709|ENST00000543440|POU2F3;ENSG00000143190|ENST00000367866|POU2F1;ENST00000533620.5_1_11:120169092-120189098:+|nuORF;ENST00000559648.1_1_1:167358914-167365774:+|nuORF;nc|ENSG00000028277|P09086-2|POU2F2;nc|ENSG00000028277|P09086-3|POU2F2;nc|ENSG00000028277|P09086-4|POU2F2;nc|ENSG00000028277|P09086-5|POU2F2;nc|ENSG00000028277|P09086|POU2F2;nc|ENSG00000137709|Q9UKI9-2|POU2F3;nc|ENSG00000137709|Q9UKI9-3|POU2F3;nc|ENSG00000143190|P14859-2|POU2F1;nc|ENSG00000143190|P14859-3|POU2F1;nc|ENSG00000143190|P14859-4|POU2F1;nc|ENSG00000143190|P14859-5|POU2F1;nc|ENSG00000143190|P14859|POU2F1 76.82478488871298 0.0187167883027705 3 [QT]S[R{I|L}]HDSQT 10 7 + 56.123 0.0 0.0 4.7905 4.7905 78.589 0.0 0.0 0.0 1.0320892531919412 35.84991425165589 1.0320892531919412 4.406140654642812 0 0.6237125054200234 0.0 1.3129529932484498 1.1861818737241734 [QT]S[R{I|L}]HDSQT;{[ET]|[MV]}S[R{I|L}][HN]SQT;[K{I|L}]Y[NG]D{M(Oxidation (M))|F}SQT;[DP][H{I|L}]{I|L}D{M(Oxidation (M))|F}SQT;[QT]S[R{I|L}]HSDQT;{[QS]|[NT]}T[R{I|L}]HDSQT;{[VA]|[{I|L}G]}[YE]{I|L}D{M(Oxidation (M))|F}SQT;[QT][RH][WE]SQT;[DN]GY[K{I|L}]{M(Oxidation (M))|F}SQT;[C(Carbamidomethyl (C))R][R{I|L}]HDSQT 4.7905;4.4144;4.3942;4.3237;4.2604;4.0952;3.9601;3.7719;3.7339;3.6532 -;-;+;-;-;-;-;-;-;- + 836 1 1.437 85273.3 1.0 3660 5228 8880 HBL1_DMSO_200M_050219_1,8890 HBL1_DMSO_200M_050219_1,8890,KLYGNDFSQT True True KLYGNDFSQT 46.723393 586.781481921673 2820241.5 8880.0 nc|ENSG00000028277|P09086|POU2F2;;nc|ENSG00000143190|P14859-5|POU2F1;;nc|ENSG00000028277|P09086-3|POU2F2;;nc|ENSG00000137709|Q9UKI9-2|POU2F3;;nc|ENSG00000143190|P14859-3|POU2F1;;nc|ENSG00000137709|Q9UKI9-3|POU2F3;;nc|ENSG00000143190|P14859|POU2F1;;chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2;;nc|ENSG00000028277|P09086-5|POU2F2;;chr19:42092134-42093829|48|27.9|0.5|5.79|-|ENST00000529067|POU2F2,POU2F2;;ENSG00000137709|ENST00000543440|POU2F3;;ENST00000533620.5_1_11:120169092-120189098:+|nuORF;;nc|ENSG00000143190|P14859-4|POU2F1;;chr19:42099821-42116709|41|13.12|0.46|4.84|-|ENST00000526831|POU2F2,POU2F2;;nc|ENSG00000143190|P14859-2|POU2F1;;ENST00000559648.1_1_1:167358914-167365774:+|nuORF;;nc|ENSG00000028277|P09086-4|POU2F2;;ENSG00000143190|ENST00000367866|POU2F1;;ENSG00000028277|ENST00000692977|POU2F2;;nc|ENSG00000028277|P09086-2|POU2F2 7.658174832661946 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8891 46.725 75.0 1282000.0 25 0 153750.0 + 13933 HYIDRVRAL 9 76 381.5525235952882 1141.6357413860646 3 381.5520812869072 MULTI CID FTMS 0 0 0 8880 228983.734375 0.0960353294093753 -2 0.1754684448242187 11 Unmodified _HYIDRVRAL_ ENSG00000176619|ENST00000325327|LMNB2 38.61474834105838 0.0830609365873449 3 HY{I|L}DRVRA{I|L} 9 0 + 56.158 0.0 0.0 4.9191 4.9191 86.943 0.0 0.0 0.0 29.960407678124625 8.672137691284405 8.672137691284405 19.960762528683706 0 0.8892494821072345 1.5228787452803376 0.0 0.8494850021680094 + + HY{I|L}DRVRA{I|L};H{I|L}YDRVRA{I|L};{I|L}HYDRVRA{I|L} 4.9191;3.1707;2.713 +;-;- + 78 + 1 1.437 80819.9 1.0 3661 5228 8880 HBL1_DMSO_200M_050219_1,8891 HBL1_DMSO_200M_050219_1,8891,HYIDRVRAL True True HYIDRVRAL 46.72513 381.552081286907 33666885.25 8880.0 ENSG00000176619|ENST00000325327|LMNB2 7.022210597991943 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8892 46.735 544.0 352860.0 25 0 29617.0 + -1 SSCKYCTWR 9 152 595.758119906609 1189.5016868800178 2 595.7585327029228 MULTI CID FTMS 0 0 0 8880 212299.859375 0.373373934991035 -1 0.084075927734375 12 Carbamidomethyl (C) _SSC(Carbamidomethyl (C))KYCTWR_ REV__ENSG00000156931|ENST00000625842|VPS8;REV__ENST00000492449.5_1_3:184603882-184769810:+|nuORF;REV__nc|ENSG00000156931|Q8N3P4-2|VPS8;REV__nc|ENSG00000156931|Q8N3P4-3|VPS8 4.3292370932331545 0.7635526921153418 3 EEK{M(Oxidation (M))|F}{I|L}R 6 -1 51.346 0.0 0.0 4.3166 0.0 0.0 369.0558985245771 0.0 369.0558985245771 0.0 25.428479137076565 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.4715141619232908 EEK{M(Oxidation (M))|F}{I|L}R 4.3166 - 518 + 1 1.437 146143.7 1.0 3662 5228 8880 HBL1_DMSO_200M_050219_1,8892 HBL1_DMSO_200M_050219_1,8892,SSCKYCTWR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8893 46.745 600.0 136590.0 25 0 7943.6 -1 0 111 872.4095498046787 3485.609093352314 4 872.6605102419853 MULTI CID FTMS 0 0 0 8880 197061.875 0.8488407216542028 -1 0.084075927734375 13 3 E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[HM]QEHSAPA 13 -1 39.215 0.0 0.0 1.1251 0.0 0.0 1476.717110654748 587.2721651666624 2063.9892758214105 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[HM]QEHSAPA 1.1251 - 966 + 1 1.437 61490.7 1.0 3663 5228 8880 HBL1_DMSO_200M_050219_1,8893 HBL1_DMSO_200M_050219_1,8893, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8894 46.759 772.0 47776.0 25 0 5802.4 -1 0 46 1106.7687233522597 0 1106.436328113079 PEAK CID FTMS 0 0 0 8880 93333.4765625 1.0 0 0.0 14 3 M 1 -1 4.6041 0.0 0.0 0.20819 0.0 0.0 1784.3260991929972 293.1251314752563 2077.4512306682536 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.20819 - 4 + 1 1.437 38318.0 1.0 3664 5228 8880 HBL1_DMSO_200M_050219_1,8894 HBL1_DMSO_200M_050219_1,8894, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8896 46.763 22.0 1942700.0 25 0 378180.0 + 12439 ASVPKVETV 9 77 465.2685407305399 928.5225285278798 2 465.2684509158134 MULTI CID FTMS 0 0 0 8895 2001519.75 0.0965272500272723 3 -0.2272415161132812 1 Unmodified _GTVPVSVAVT_ ENSG00000100664|ENST00000216554|EIF5 29.081581746732265 0.3152867722954398 3 [KP]VETVGTV 9 8 + 42.387 0.0 0.0 4.565 4.565 85.58 0.0 0.0 0.0 3.802112417116057 22.09207965452089 3.802112417116057 17.95880017344075 0 0.5242275032520141 0.0 0.7302046884880937 0.0 [KP]VETVGTV;[PA]A[{I|L}T]TVGTV;[PS]{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}VGTV 4.565;2.6309;1.24 -;-;- 134 1 1.425 34781.3 1.0 3665 5229 8895 HBL1_DMSO_200M_050219_1,8896 HBL1_DMSO_200M_050219_1,8896,GTVPVSVAVT False False ASVPKVETV 46.762748 465.268450915813 180055504.0 8895.0 ENSG00000100664|ENST00000216554|EIF5 6.103854974110921 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8897 46.764 16.0 2557100.0 25 0 350720.0 + 2182 AQAPDLQRV 9 63 499.274774576537 996.534996219874 2 499.2748901247978 MULTI CID FTMS 0 0 0 8895 3202654.0 0.0423434506022383 5 -0.36834716796875 2 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 26.268140514670165 0.1969607489560049 3 [QA]APD{I|L} 6 3 46.955 0.0 0.0 4.7118 0.0 0.0 0.0 398.2164705865844 398.2164705865844 34.19088487897621 0.0 0.0 0.0 0 1.0 1.154901959985743 0.0 0.0 + [QA]APD{I|L} 4.7118 + + 30 + 1 1.425 39997.9 1.0 3666 5229 8895 HBL1_DMSO_200M_050219_1,8897 HBL1_DMSO_200M_050219_1,8897,AQAPDLQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8898 46.765 2.1 18631000.0 25 0 1481900.0 + 24959 MPPPPPQGV 9 84 460.2385793050109 918.462605676822 2 460.7397643923759 MULTI CID FTMS 0 0 0 8895 12970720.0 0.8389867465563673 3 -0.2272415161132812 3 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 3 {[HG]|PP}MPP 5 5 25.502 0.0 0.0 2.7766 0.0 0.0 0.0 396.1871968808357 396.1871968808357 9.30400924012389 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {[HG]|PP}MPP 2.7766 - 77 1 1.425 36174.6 1.0 3667 5229 8895 HBL1_DMSO_200M_050219_1,8898 HBL1_DMSO_200M_050219_1,8898,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8899 46.766 6.9 7180400.0 25 0 1114500.0 + 34919 SQIPAQPSV 9 62 463.7503613456468 925.4861697580936 2 463.7504455447197 MULTI CID FTMS 0 0 0 8895 8154911.0 0.7152227370868656 -1 0.1010665893554687 4 Unmodified _SQIPAQPSV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 47.594388314883695 0.0456443387682827 3 {[QS]|[NT]}{I|L}PAQ 6 3 33.76 0.0 0.0 3.6478 0.0 0.0 0.0 298.1391598306123 298.1391598306123 10.734895722697916 0.0 0.0 0.0 0 0.805462187404089 0.8860566476931632 0.0 0.2742275032520141 + {[QS]|[NT]}{I|L}PAQ 3.6478 + + 269 1 1.425 48739.8 1.0 3668 5229 8895 HBL1_DMSO_200M_050219_1,8899 HBL1_DMSO_200M_050219_1,8899,SQIPAQPSV True True SQIPAQPSV 46.766284 463.75044554472 161007008.0 8895.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 5.908910433451335 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8900 46.767 9.4 5889400.0 25 0 651780.0 + 43220 WAPIRDGASI 10 66 362.529520375864 1084.566731727792 3 362.5293151736259 MULTI CID FTMS 0 0 0 8895 5507533.5 0.9745605413409782 1 -0.0478897094726562 5 Unmodified _WAPIRDGASI_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 22.736283301280096 0.4578556481593033 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 5 -1 48.06 0.0 0.0 4.4312 0.0 0.0 0.0 485.2505587213501 485.2505587213501 34.78855930516417 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.7614393726401688 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 4.4312 - 58 + 1 1.425 56386.9 1.0 3669 5229 8895 HBL1_DMSO_200M_050219_1,8900 HBL1_DMSO_200M_050219_1,8900,WAPIRDGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8901 46.769 15.0 3660200.0 25 0 362490.0 + 8976 FASHVSPEV 9 81 486.7428658401039 971.4711787470078 2 486.7429077029228 MULTI CID FTMS 0 0 0 8895 3636768.0 0.5513609493291676 -2 0.1851425170898437 6 Unmodified _FASHVSPEV_ ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3 57.47134341890925 0.0274820932774257 3 ADHVS[EP]V 8 2 48.395 0.0 0.0 4.9817 0.0 0.0 119.07409102607578 0.0 119.07409102607578 0.0 24.29272399943335 0.0 0.0 0 1.2134679910804405 0.0 0.75 0.0 ADHVS[EP]V 4.9817 - 423 1 1.425 48637.6 1.0 3670 5229 8895 HBL1_DMSO_200M_050219_1,8901 HBL1_DMSO_200M_050219_1,8901,FASHVSPEV True True FASHVSPEV 46.768642 486.742907702923 82056032.0 8895.0 nc|ENSG00000242247|Q9NP61-2|ARFGAP3;;ENSG00000242247|ENST00000263245|ARFGAP3 8.41585365931193 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8902 46.77 26.0 2349000.0 25 0 314290.0 + 43213 WALNWSLPV 9 64 543.2906565684075 1084.5667602036149 2 543.2905761599541 MULTI CID FTMS 0 0 0 8895 2075742.5 1.0 0 0.0 7 Unmodified _WALNWSLPV_ REV__ENST00000473097.5_1_1:1288733-1289815:-|nuORF 10.823927491677226 0.5436922275383211 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PER 5 -1 43.456 0.0 0.0 4.0067 0.0 0.0 0.0 442.2324312799438 442.2324312799438 24.247425010840047 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PER 4.0067 - 27 + 1 1.425 51336.5 1.0 3671 5229 8895 HBL1_DMSO_200M_050219_1,8902 HBL1_DMSO_200M_050219_1,8902,WALNWSLPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8903 46.771 39.0 1865000.0 25 0 1109500.0 3532 CVGRGKWR 8 51 481.260822884083 960.507092834966 2 481.2615844607353 MULTI CID FTMS 0 0 0 8895 1879318.75 0.7163892368098717 1 -0.0478897094726562 8 Unmodified _CVGRGKWR_ ENST00000423081.1_1_1:150899152-150899203:+|nuORF 2.577480529830294 0.808687252328423 3 V 1 7 11.42 0.0 0.0 1.189 0.0 0.0 843.4274170920934 0.0 843.4274170920934 0.0 10.935433216785722 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.189 + + 2 + 1 1.425 63278.4 1.0 3672 5229 8895 HBL1_DMSO_200M_050219_1,8903 HBL1_DMSO_200M_050219_1,8903,CVGRGKWR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8904 46.772 35.0 1218100.0 25 0 183950.0 + 21301 LPENSMRAV 9 56 508.76225008574977 1015.5099472382996 2 508.7632324099541 MULTI CID FTMS 0 0 0 8895 1863564.75 0.3997035733137267 2 -0.1133651733398437 9 Unmodified _LPENSMRAV_ chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1;ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-17|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1 39.94969957227396 0.0757326808254658 3 {I|L}PENSM 6 3 67.273 0.0 0.0 6.6246 0.0 0.0 0.0 341.19404016666255 341.19404016666255 39.825703356767264 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.3807196863200844 0.7742275032520141 + {I|L}PENSM 6.6246 + + 54 + 1 1.425 42302.3 1.0 3673 5229 8895 HBL1_DMSO_200M_050219_1,8904 HBL1_DMSO_200M_050219_1,8904,LPENSMRAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8905 46.774 104.0 1204000.0 25 0 37038.0 -1 0 89 698.1288100974558 3485.607668154279 5 698.5304443240166 MULTI CID FTMS 0 0 0 8895 1377407.75 1.0 0 0.0 10 3 WGTP 4 -1 36.186 0.0 0.0 1.0381 0.0 0.0 3026.421599297438 0.0 3026.421599297438 0.0 10.779550148593486 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 WGTP 1.0381 - 92 1 1.425 95701.2 1.0 3674 5229 8895 HBL1_DMSO_200M_050219_1,8905 HBL1_DMSO_200M_050219_1,8905, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8906 46.776 40.0 875380.0 25 0 71739.0 11117 GEGGFEINLD 10 75 350.8281747415295 1049.4626948247883 3 350.8280212283134 MULTI CID FTMS 0 0 0 8895 1170046.125 0.2999594301636413 2 -0.1133651733398437 11 Unmodified _GEGGFEINLD_ ENSG00000171953|ENST00000474627|ATPAF2;ENST00000497871.1_1_17:17931515-17942399:-|nuORF 8.444304893310646 0.6875766406947869 3 V 1 10 15.485 0.0 0.0 1.4755 0.0 0.0 932.383164040412 0.0 932.383164040412 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4755 - 26 + 1 1.425 37046.2 1.0 3675 5229 8895 HBL1_DMSO_200M_050219_1,8906 HBL1_DMSO_200M_050219_1,8906,GEGGFEINLD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8907 46.777 72.0 798520.0 25 0 95076.0 + 6672 EAYLGKTV 8 83 440.742318239149 879.470083545098 2 440.7421142458916 MULTI CID FTMS 0 0 0 8895 936242.375 0.1153251283583751 2 -0.1133651733398437 12 Unmodified _EAYLGKTV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 54.773552608820026 0.1167943196628344 3 {I|L}GKTV 5 3 19.92 0.0 0.0 2.2649 0.0 0.0 363.14313149607295 0.0 363.14313149607295 0.0 -3.942929898493855 -3.942929898493855 0.0 0 0.3054621874040891 0.0 0.6643943297944485 0.0 + {I|L}GKTV 2.2649 + + 181 + 1 1.425 49925.7 1.0 3676 5229 8895 HBL1_DMSO_200M_050219_1,8907 HBL1_DMSO_200M_050219_1,8907,EAYLGKTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8908 46.779 50.0 675580.0 25 0 61015.0 + -1 NEWCMLVV 8 72 525.7386820375046 1049.4628111418092 2 525.7380248904228 MULTI CID FTMS 0 0 0 8895 967572.875 0.3240502171349705 2 -0.1133651733398437 13 Carbamidomethyl (C) _NEWC(Carbamidomethyl (C))MLVV_ REV__ENSG00000156931|ENST00000625842|VPS8;REV__ENST00000492449.5_1_3:184603882-184769810:+|nuORF;REV__ENST00000495190.1_1_3:184612509-184618801:+|nuORF;REV__nc|ENSG00000156931|Q8N3P4-2|VPS8;REV__nc|ENSG00000156931|Q8N3P4-3|VPS8 18.13498045792455 0.6430038125133779 3 [DG]AVPAAVV 9 -1 33.219 0.0 0.0 3.1653 0.0 0.0 0.0 267.041826604953 267.041826604953 10.260266353185417 0.0 0.0 0.0 0 1.0 0.8860566476931632 0.0 0.0 [DG]AVPAAVV 3.1653 - 93 1 1.425 35258.4 1.0 3677 5229 8895 HBL1_DMSO_200M_050219_1,8908 HBL1_DMSO_200M_050219_1,8908,NEWCMLVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8909 46.78 63.0 773500.0 25 0 76066.0 -1 QPPPKCPI 8 87 468.7523884023757 935.4902238715514 2 468.7522460818291 MULTI CID FTMS 0 0 0 8895 781825.5625 0.8647262760893735 10 -0.7141456604003906 14 Carbamidomethyl (C) _QPPPKC(Carbamidomethyl (C))PI_ ENSG00000187170|ENST00000368777|LCE4A 12.531546534597751 0.7257836412119636 3 GV 2 -1 13.979 0.0 0.0 1.4943 0.0 0.0 761.3892697473311 0.0 761.3892697473311 0.0 1.3620153339471113 0.0 0.0 0 0.0 0.0 0.0 0.0 GV 1.4943 - 218 + 1 1.425 42552.4 1.0 3678 5229 8895 HBL1_DMSO_200M_050219_1,8909 HBL1_DMSO_200M_050219_1,8909,QPPPKCPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8910 46.783 129.0 716760.0 25 0 49346.0 + 28008 PMPPRTNE 8 102 471.2302739017799 940.4459948703598 2 471.2303954958916 MULTI CID FTMS 0 0 0 8895 647207.6875 0.5491050000243921 13 -1.020854949951172 15 Unmodified _PMPPRTNE_ REV__ENSG00000101203|ENST00000358894|COL20A1;REV__ENST00000471582.5_1_20:61956720-61961007:+|nuORF;REV__ENST00000479501.5_1_20:61950534-61961007:+|nuORF;REV__nc|ENSG00000101203|Q9P218-2|COL20A1;REV__nc|ENSG00000101203|Q9P218-3|COL20A1 15.847184025352805 0.6768015514314958 3 MPPP 4 -1 56.542 0.0 0.0 6.0123 0.0 0.0 0.0 515.2246798150999 515.2246798150999 46.16369046023241 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 MPPP 6.0123 - 211 + 1 1.425 78429.1 1.0 3679 5229 8895 HBL1_DMSO_200M_050219_1,8910 HBL1_DMSO_200M_050219_1,8910,PMPPRTNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8911 46.784 71.0 714400.0 25 0 96878.0 + 227 AAVDAVARV 9 82 436.2532732889498 870.4919936446996 2 436.2534973025322 MULTI CID FTMS 0 0 0 8895 539824.125 0.6605754614923085 -1 0.1010665893554687 16 Unmodified _AAVDAVARV_ ENSG00000184967|ENST00000330579|NOC4L;ENST00000535343.5_1_12:132632219-132636084:+|nuORF 41.8396318013385 0.0653578398400075 3 AAVDAVARV 9 0 + 67.292 0.0 0.0 7.7303 7.7303 87.115 0.0 0.0 0.0 47.62578788640525 10.846755565910442 10.846755565910442 3.979400086720375 0 1.25 1.5228787452803376 0.0 0.0 + + AAVDAVARV;AAVDVAARV;AAVVDAARV;AAVD[Q{I|L}]RV 7.7303;7.2731;6.2371;5.5237 +;-;-;- + 123 + 1 1.425 46145.1 1.0 3680 5229 8895 HBL1_DMSO_200M_050219_1,8911 HBL1_DMSO_200M_050219_1,8911,AAVDAVARV True True AAVDAVARV 46.784425 436.253497302532 3570019.25 8895.0 ENST00000535343.5_1_12:132632219-132636084:+|nuORF;;ENSG00000184967|ENST00000330579|NOC4L 5.276623725891113 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8912 46.787 135.0 1795600.0 25 0 311780.0 + 10836 GAAKDLPGV 9 131 414.2347030448252 826.4548531564504 2 414.2349426150322 MULTI CID FTMS 0 0 0 8895 422048.4375 0.0643652632023625 -3 0.2765350341796875 17 Unmodified _GAAKDLPGV_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 53.832793166522166 0.0319663582346103 3 [AG]AKD{I|L}PGV 9 0 + 20.787 0.0 0.0 2.5152 2.5152 72.453 0.0 0.0 0.0 2.070738741676617 2.289809598173985 2.070738741676617 3.9045736685793777 0 1.4951863001768153 1.0969100130080565 0.5356668758921829 0.0 + + [AG]AKD{I|L}PGV;[AG]A{I|L}TAAPGV;{I|L}{I|L}[NS]QPGV;[AG][VS]Q{I|L}PGV;[AG][VS]{I|L}QPGV;[TP]TKQPGV;[EP][RV]{NN|[MP]|[D{I|L}]|[EV]}V;[AG]A{I|L}TP[QA]V;[TP]SA[KA]PGV;[AG]A{I|L}S[VG]PGV 2.5152;2.0427;2.0387;1.9434;1.9024;1.8721;1.7617;1.4931;1.4103;1.3588 +;-;-;-;-;-;-;-;-;- + 1123 1 1.425 190503.4 1.0 3681 5229 8895 HBL1_DMSO_200M_050219_1,8912 HBL1_DMSO_200M_050219_1,8912,GAAKDLPGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8913 46.791 226.0 420520.0 25 0 25964.0 + 30677 RFPEHVREI 9 106 394.8839030654239 0 394.8836547732353 PEAK CID FTMS 0 0 0 8895 347026.9375 0.7931325367722025 4 -0.2910881042480469 18 Unmodified _RFPEHVREI_ ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR 23.80106514851385 0.1666134462997421 3 HV 2 7 7.9588 0.0 0.0 1.0103 0.0 0.0 135.386763397043 413.2171798375935 548.6039432346365 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + HV 1.0103 + + 43 + 1 1.425 81632.1 1.0 3682 5229 8895 HBL1_DMSO_200M_050219_1,8913 HBL1_DMSO_200M_050219_1,8913,RFPEHVREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8914 46.796 255.0 614320.0 25 0 67411.0 + -1 VPYGSFKHV 9 168 345.1879131095833 344.1806366429833 1 345.1881591677666 MULTI CID FTMS 0 0 0 8895 349039.09375 0.6188087824660934 -2 0.1851425170898437 19 nc|ENSG00000163935|Q9UHJ3-2|SFMBT1;ENSG00000163935|ENST00000394752|SFMBT1 3 H 1 -1 11.783 0.0 0.0 3.4234 0.0 0.0 189.11102407149733 0.0 189.11102407149733 0.0 0.9452811811002436 0.0 0.0 0 0.0 0.0 0.0 0.0 H 3.4234 - 32 + 1 1.425 136759.4 1.0 3683 5229 8895 HBL1_DMSO_200M_050219_1,8914 HBL1_DMSO_200M_050219_1,8914, False False VPYGSFKHV 46.79614 345.188159167767 4586610.5 8895.0 nc|ENSG00000163935|Q9UHJ3-2|SFMBT1;;ENSG00000163935|ENST00000394752|SFMBT1 6.834561189015706 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8915 46.806 589.0 180630.0 25 0 10503.0 -1 0 73 872.4095498046787 3485.609093352314 4 872.9111205935478 MULTI CID FTMS 0 0 0 8895 274450.34375 1.0 0 0.0 20 3 NTG 3 -1 30.445 0.0 0.0 0.87346 0.0 0.0 0.0 3210.459062085986 3210.459062085986 5.76606256887672 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 NTG 0.87346 - 51 + 1 1.425 77555.8 1.0 3684 5229 8895 HBL1_DMSO_200M_050219_1,8915 HBL1_DMSO_200M_050219_1,8915, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8917 46.817 471.0 299780.0 25 0 36595.0 + 39701 VEGKRNSRV 9 154 522.798158913099 0 522.8026611208916 PEAK CID FTMS 0 0 0 8916 100370.1796875 0.0562433334790266 9 -0.6662559509277344 1 Unmodified _VEGKRNSRV_ REV__ENSG00000132740|ENST00000255078|IGHMBP2 18.1463463914782 0.2188250594445807 3 P{M(Oxidation (M))|F}SARRD 7 -1 17.726 0.0 0.0 1.6986 0.0 0.0 129.082472637658 82.06699548892811 211.1494681265861 0.0 0.0 0.0 0.0 0 0.0994850021680094 0.0 0.7302046884880937 0.0 P{M(Oxidation (M))|F}SARRD 1.6986 - 124 + 1 1.425 114952.7 1.0 3685 5230 8916 HBL1_DMSO_200M_050219_1,8917 HBL1_DMSO_200M_050219_1,8917,VEGKRNSRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8918 46.818 15.0 3009300.0 25 0 395620.0 + 6533 EALGNVRTV 9 71 479.7695907946123 957.5246286560248 2 479.7697631716728 MULTI CID FTMS 0 0 0 8916 2695937.0 0.7040933499166514 -1 0.0478897094726562 2 Unmodified _EALGNVRTV_ ENSG00000197150|ENST00000358849|ABCB8;ENST00000466514.5_1_7:150731570-150742433:+|nuORF;ENST00000470645.5_1_7:150732911-150733055:+|nuORF;nc|ENSG00000197150|Q9NUT2-3|ABCB8;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-5|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8 36.506200033944 0.094635877243972 3 {[CP]|[EA]}{I|L}GNVRTV 9 0 + 45.723 0.0 0.0 4.7751 4.7751 83.586 0.0 0.0 0.0 31.017832630189844 7.70281599369082 7.70281599369082 9.208187539523747 0 0.4247425010840047 0.0 0.0 0.3807196863200844 + + {[CP]|[EA]}{I|L}GNVRTV;{[CP]|[EA]}{I|L}GGGVRTV;{[CP]|[EA]}{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[PG];{[CP]|[EA]}{I|L}[RN]RTV;{[CP]|[EA]}{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PG]V 4.7751;3.8134;3.174;2.4547;2.0864 +;-;-;-;- + 153 + 1 1.425 38782.6 1.0 3686 5230 8916 HBL1_DMSO_200M_050219_1,8918 HBL1_DMSO_200M_050219_1,8918,EALGNVRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8919 46.819 37.0 1873200.0 25 0 192850.0 + 31329 RMLPHAPGV 9 83 489.2707425835928 976.5269322339856 2 489.2706481814384 MULTI CID FTMS 0 0 0 8916 1423489.375 0.2063299597976081 -2 0.148956298828125 3 Unmodified _RMLPHAPGV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 21.74664581756881 0.2544899275067181 3 PHAPR 5 5 30.445 0.0 0.0 3.1177 0.0 0.0 400.22566420722814 0.0 400.22566420722814 0.0 19.987737688117235 0.0 0.0 0 1.1237125054200234 0.0 0.0 0.0 PHAPR 3.1177 - 117 1 1.425 57782.7 1.0 3687 5230 8916 HBL1_DMSO_200M_050219_1,8919 HBL1_DMSO_200M_050219_1,8919,RMLPHAPGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8920 46.82 43.0 927170.0 25 0 82324.0 + -1 EVPSSMQPV 9 66 495.23363697004334 988.4527210068868 2 495.2335693240166 MULTI CID FTMS 0 0 0 8916 748485.0 0.7942706312548573 -1 0.0478897094726562 4 Oxidation (M) _EVPSSM(Oxidation (M))QPV_ REV__ENSG00000132549|ENST00000357162|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8-6|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8|VPS13B 18.13498045792455 0.3457906370836843 3 [{I|L}T]{M(Oxidation (M))|F} 3 -1 25.234 0.0 0.0 2.5529 0.0 0.0 0.0 624.2624493606554 624.2624493606554 1.933115814076345 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [{I|L}T]{M(Oxidation (M))|F} 2.5529 - 185 1 1.425 36485.7 1.0 3688 5230 8916 HBL1_DMSO_200M_050219_1,8920 HBL1_DMSO_200M_050219_1,8920,EVPSSMQPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8921 46.827 390.0 479000.0 25 0 28311.0 + 5443 DLPSRLGHF 9 187 521.2770300211 1040.539507109 2 521.2774536013603 MULTI CID FTMS 0 0 0 8916 439269.84375 0.5890139858522349 -5 0.3651046752929687 5 Unmodified _DLPSRLGHF_ REV__ENSG00000113721|ENST00000261799|PDGFRB;REV__ENST00000520579.5_1_5:149495328-149514444:-|nuORF 10.073929032068715 0.563993802247229 3 {NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]PGV{[QG]|[NA]} 10 -1 + 32.195 0.0 0.0 3.0941 3.0941 70.188 0.0 0.0 0.0 2.541679111176024 1.8124123737558728 1.8124123737558728 1.8124123737558728 0 0.5 1.154901959985743 0.6549471895720985 0.0 {NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]PGV{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]PG{M(Oxidation (M))|F}H;{[TV]|[{I|L}S]}D[R{I|L}]PG{M(Oxidation (M))|F}H;{NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]PR{[QG]|[NA]};{[HG]|PP}[VG]HPPGV{[QG]|[NA]};[DV]T[R{I|L}]PG{M(Oxidation (M))|F}H;{[HG]|PP}[RH]PPGV{[QG]|[NA]};[PG]VPHPPGV{[QG]|[NA]};{[HG]|PP}[RH]PPG{M(Oxidation (M))|F}H;{[HG]|PP}[VG]HPPR{[QG]|[NA]} 3.0941;2.9199;2.8498;2.7556;1.8892;1.8817;1.8358;1.737;1.6617;1.5465 -;-;-;-;-;-;-;-;-;- 905 1 1.425 147059.3 1.0 3689 5230 8916 HBL1_DMSO_200M_050219_1,8921 HBL1_DMSO_200M_050219_1,8921,DLPSRLGHF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8922 46.831 194.0 418080.0 25 0 49033.0 + 39496 VARVEPNI 8 104 449.2612638801247 896.5079748270495 2 449.2615844607353 MULTI CID FTMS 0 0 0 8916 313832.5 1.0 0 0.0 6 Unmodified _VARVEPNI_ ENSG00000134697|ENST00000373062|GNL2 32.30548876998284 0.3644845974844379 3 {[VA]|[{I|L}G]}RVEPN{I|L} 8 0 + 25.755 0.0 0.0 2.8728 2.8728 75.117 0.0 0.0 0.0 5.854898670513048 6.022557938651374 5.854898670513048 5.854898670513048 0 0.9291746928241126 1.0457574905606752 0.0 0.2742275032520141 + + {[VA]|[{I|L}G]}RVEPN{I|L};[DP]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}VN{I|L};{[VA]|[{I|L}G]}R[EP]VN{I|L};[KA]PQQVN{I|L} 2.8728;2.2197;1.0119;0.21512 +;-;-;- + 273 1 1.425 68228.0 1.0 3690 5230 8916 HBL1_DMSO_200M_050219_1,8922 HBL1_DMSO_200M_050219_1,8922,VARVEPNI False True VARVEPNI 46.831004 449.261584460735 2232727.0 8916.0 ENSG00000134697|ENST00000373062|GNL2 1.860090931256612 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8923 46.84 502.0 320020.0 25 0 62479.0 + 13935 HYIDRVRAL 9 118 571.824325464429 1141.6340979956578 2 571.8246948122978 MULTI CID FTMS 0 0 0 8916 219596.390625 1.0 0 0.0 7 Unmodified _HYIDRVRAL_ ENSG00000176619|ENST00000325327|LMNB2 38.61474834105838 0.0830609365873449 3 {I|L}{[CT]|[{M(Oxidation (M))|F}G]}[NP]R 6 8 18.958 0.0 0.0 1.6606 0.0 0.0 0.0 454.2776278131469 454.2776278131469 1.012196779647642 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.6549471895720985 {I|L}{[CT]|[{M(Oxidation (M))|F}G]}[NP]R 1.6606 - 383 + 1 1.425 124319.7 1.0 3691 5230 8916 HBL1_DMSO_200M_050219_1,8923 HBL1_DMSO_200M_050219_1,8923,HYIDRVRAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8924 46.85 564.0 199420.0 25 0 12445.0 -1 VHHFFCDVPA 10 119 614.7838676833189 1227.5531824334378 2 614.7844116091728 MULTI CID FTMS 0 0 0 8916 167330.28125 0.7411691344302505 1 -0.0654754638671875 8 Carbamidomethyl (C) _VHHFFC(Carbamidomethyl (C))DVPA_ ENSG00000172365|ENST00000641342|OR5B2 21.74664581756881 0.480091245866545 3 YP{I|L} 3 -1 42.461 0.0 0.0 3.459 0.0 0.0 0.0 851.330757035138 851.330757035138 7.081910762351328 0.0 0.0 0.0 0 0.3252574989159953 1.3010299956639813 0.0 0.0 YP{I|L} 3.459 - 787 + 1 1.425 86474.0 1.0 3692 5230 8916 HBL1_DMSO_200M_050219_1,8924 HBL1_DMSO_200M_050219_1,8924,VHHFFCDVPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8925 46.862 683.0 123550.0 25 0 7219.0 -1 YLMKFYCRCFQ 11 94 808.3645628642868 0 808.3604614138603 PEAK CID FTMS 0 0 0 8916 143312.296875 0.6048280141539979 -5 0.3651046752929687 9 2 Carbamidomethyl (C) _YLMKFYC(Carbamidomethyl (C))RC(Carbamidomethyl (C))FQ_ ENST00000599501.6_3_2:98292334-98305447:+|nuORF 1.3295316138638542 0.4761840153648598 3 {M(Oxidation (M))|F}ANQQA 6 -1 38.136 0.0 0.0 2.3618 0.0 0.0 309.13695181511144 643.2518404596311 952.3887922747426 0.0 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 {M(Oxidation (M))|F}ANQQA 2.3618 - 624 + 1 1.425 63137.3 1.0 3693 5230 8916 HBL1_DMSO_200M_050219_1,8925 HBL1_DMSO_200M_050219_1,8925,YLMKFYCRCFQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8926 46.872 586.0 199450.0 25 0 38226.0 + 23884 LVLLLLRPLEG 11 142 618.4059630755619 0 618.4061767458916 PEAK CID FTMS 0 0 0 8916 125648.484375 0.8118650476149611 1 -0.0654754638671875 10 Unmodified _LVLLLLRPLEG_ REV__ENSG00000196352|ENST00000367064|CD55;REV__ENST00000488171.5_1_1:207495110-207510876:+|nuORF;REV__nc|ENSG00000196352|P08174-2|CD55;REV__nc|ENSG00000196352|P08174-3|CD55;REV__nc|ENSG00000196352|P08174-4|CD55;REV__nc|ENSG00000196352|P08174-5|CD55;REV__nc|ENSG00000196352|P08174-6|CD55;REV__nc|ENSG00000196352|P08174-7|CD55 1.3295316138638542 0.4761840153648598 3 Q{I|L}ES 4 -1 15.433 0.0 0.0 1.2498 0.0 0.0 60.19673952827368 714.3639010065061 774.5606405347798 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L}ES 1.2498 - 176 + 1 1.425 88439.5 1.0 3694 5230 8916 HBL1_DMSO_200M_050219_1,8926 HBL1_DMSO_200M_050219_1,8926,LVLLLLRPLEG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8928 46.877 57.0 755500.0 25 0 194870.0 + 45949 YYYDTHTNTY 10 63 670.7748412146086 1339.5351294960171 2 670.7753173708916 MULTI CID FTMS 0 0 0 8927 881670.625 0.2304949833580319 3 -0.2549819946289062 1 Unmodified _YYYDTHTNTY_ ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2 39.94969957227396 0.1580982266129622 3 YY[HS]GDT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY 11 5 + 48.733 0.0 0.0 3.6381 3.6381 82.219 0.0 0.0 0.0 25.92455664516645 5.004410582708196 5.004410582708196 13.636770311972723 0 0.4247425010840047 2.0 0.3807196863200844 0.0 YY[HS]GDT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TY;YYYQ{[QS]|[NT]}YYY;[HT]{[YD]|[{M(Oxidation (M))|F}M]}T{[QS]|[NT]}YYY;{[QS]|[NT]}[WD]T{[QS]|[NT]}YYY;[HT]{[YD]|[{M(Oxidation (M))|F}M]}[C(Carbamidomethyl (C))R]YYY;[Q{I|L}][C(Carbamidomethyl (C))D]T{[QS]|[NT]}YYY;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))N]T{[QS]|[NT]}YYY;{[QS]|[NT]}[WD][C(Carbamidomethyl (C))R]YYY;{[QS]|[NT]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}E{[QS]|[NT]}YYY;[Q{I|L}][C(Carbamidomethyl (C))D][C(Carbamidomethyl (C))R]YYY 3.6381;2.62;1.2614;0.81192;0.77373;0.73957;0.58719;0.32428;0.29012;0.25193 -;-;-;-;-;-;-;-;-;- 239 + 1 1.421 37140.4 1.0 3695 5231 8927 HBL1_DMSO_200M_050219_1,8928 HBL1_DMSO_200M_050219_1,8928,YYYDTHTNTY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8929 46.879 85.0 740270.0 25 0 123260.0 + -1 LMLVMWFPC 9 85 410.1917460056978 1227.5534086172936 3 410.1917907595634 MULTI CID FTMS 0 0 0 8927 804398.0625 0.5233504807367002 3 -0.2549819946289062 2 Carbamidomethyl (C),2 Oxidation (M) _LM(Oxidation (M))LVM(Oxidation (M))WFPC(Carbamidomethyl (C))_ REV__ENST00000452780.1_2_2:120776709-120799636:+|nuORF 5.731851221503515 0.7145881442174411 3 YP{I|L}V 4 -1 31.938 0.0 0.0 2.6018 0.0 0.0 0.0 752.2620943658811 752.2620943658811 17.296962438796157 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YP{I|L}V 2.6018 - 172 + 1 1.421 53788.0 1.0 3696 5231 8927 HBL1_DMSO_200M_050219_1,8929 HBL1_DMSO_200M_050219_1,8929,LMLVMWFPC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8930 46.88 44.0 1251700.0 25 0 130810.0 + -1 MFQNRVRPL 9 75 392.8814055270768 1175.6223871814304 3 392.8814880251884 MULTI CID FTMS 0 0 0 8927 766175.25 0.8001392613119465 1 -0.1138763427734375 3 Oxidation (M) _M(Oxidation (M))FQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 19.361941925380144 0.3125782356748823 3 {M(Oxidation (M))|F}{M(Oxidation (M))|F}Q[RN]VR[{I|L}P] 9 -1 + 47.101 0.0 0.0 4.0065 4.0065 81.257 0.0 0.0 0.0 26.131674952134105 5.686362358410122 5.686362358410122 9.208187539523747 0 0.0 1.3979400086720375 0.0 0.4247425010840047 {M(Oxidation (M))|F}{M(Oxidation (M))|F}Q[RN]VR[{I|L}P];{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG][RN]VR[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}KK[RN]Q{M(Oxidation (M))|F}E 4.0065;3.2232;1.9232 +;-;- + 53 + 1 1.421 54290.1 1.0 3697 5231 8927 HBL1_DMSO_200M_050219_1,8930 HBL1_DMSO_200M_050219_1,8930,MFQNRVRPL False False MFQNRVRPL 46.879762 392.8817 12133887.0 8927.0 ENST00000564557.1_1_16:58633371-58663636:-|nuORF 6.916110356648763 3.0 True 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8931 46.881 40.0 1268200.0 25 0 159330.0 + -1 PSPPIERV 8 73 468.76163118641904 935.508709439638 2 468.7634155154228 MULTI CID FTMS 0 0 0 8927 866395.125 0.3230036243976851 -3 0.2144317626953125 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PSPPIERV_ REV__ENST00000313543.4_1_7:150217976-150218036:+|nuORF 7.910154910731844 0.7763180056447161 3 [EP]P[VP][W{I|L}]V 8 -1 + 24.614 0.0 0.0 2.6311 2.6311 80.945 0.0 0.0 0.0 12.140012553530966 0.1772876696043113 0.1772876696043113 18.224643483007192 0 0.0 1.3979400086720375 0.0 0.0 [EP]P[VP][W{I|L}]V;[VG][EP][{I|L}T]{I|L}[HA];[TP][PS][{I|L}T]{I|L}[HA] 2.6311;0.68301;0.27898 -;-;- 54 + 1 1.421 44984.0 1.0 3698 5231 8927 HBL1_DMSO_200M_050219_1,8931 HBL1_DMSO_200M_050219_1,8931,PSPPIERV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8932 46.887 335.0 585100.0 25 0 61863.0 + 20800 LLVVYPWTQR 10 95 637.8665177237659 1273.7184825143318 2 637.8669311404228 MULTI CID FTMS 0 0 0 8927 647275.3125 0.3325682785171606 7 -0.53662109375 5 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 65.47368725323818 0.0222277162070287 3 {I|L}{I|L}VVYPW[QT]R 10 0 + 93.096 0.0 0.0 7.309 7.309 83.603 0.0 0.0 0.0 31.09607684447191 5.166297960033361 5.166297960033361 2.4551266781414967 0 1.3807196863200843 1.6989700043360187 0.3807196863200844 1.1237125054200234 + + {I|L}{I|L}VVYPW[QT]R;{I|L}{I|L}VVYPWSAAR;{I|L}{I|L}VVYPW{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K;{I|L}{I|L}VVYP{[CP]|[EA]}[KS]R;{I|L}{I|L}VVYP{[DA]|[EG]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K;{I|L}{I|L}VVYP[MN]{[VA]|[{I|L}G]}R;{I|L}{I|L}VVYP[MN][TP]K;{I|L}{I|L}VVY[DP]V[QT]K;{I|L}{I|L}VVY[DP]{I|L}{[QS]|[NT]}K;{I|L}{I|L}VV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]VV{[VA]|[{I|L}G]}R 7.309;7.1162;6.9034;6.565;6.1839;6.1278;6.0211;5.847;5.4724;5.0854 +;-;-;-;-;-;-;-;-;- + 426 + 1 1.421 148036.9 1.0 3699 5231 8927 HBL1_DMSO_200M_050219_1,8932 HBL1_DMSO_200M_050219_1,8932,LLVVYPWTQR True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8933 46.889 86.0 897470.0 25 0 52739.0 + 41178 VPDQPHPEI 9 112 516.2614406525612 1030.5083283719223 2 516.2629272341728 MULTI CID FTMS 0 0 0 8927 492513.84375 0.0808231427240785 -6 0.4305801391601562 6 Unmodified _VPDQPHPEI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 29.84058131909904 0.1515068451768857 3 VPDQ 4 5 44.087 0.0 0.0 4.2781 0.0 0.0 0.0 588.2800524491013 588.2800524491013 10.67024086827658 0.0 0.0 0.0 0 0.6307196863200843 1.3010299956639813 0.0 0.4247425010840047 + VPDQ 4.2781 + + 1116 + 1 1.421 65066.9 1.0 3700 5231 8927 HBL1_DMSO_200M_050219_1,8933 HBL1_DMSO_200M_050219_1,8933,VPDQPHPEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8934 46.897 438.0 272800.0 25 0 41794.0 -1 ECKECRKCFY 10 121 711.7993234013727 1421.5840938695453 2 712.2999755740166 MULTI CID FTMS 0 0 0 8927 441397.59375 0.1476052617014759 5 -0.3942451477050781 7 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KECRKC(Carbamidomethyl (C))FY_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 13.90604991867851 0.6142120002215601 3 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y 13 -1 + 105.11 0.0 0.0 7.3936 7.3936 80.93 0.0 0.0 0.0 5.780381464770102 10.696083918116416 5.780381464770102 0.6214790674884512 0 1.1435078169319297 1.154901959985743 1.923877368056628 1.9742887089386447 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGAENA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQENA{M(Oxidation (M))|F}Y;[AG]AHDEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y;[AG]DAHEAQQDA{M(Oxidation (M))|F}Y;[AG]AHDEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGADQA{M(Oxidation (M))|F}Y 7.3936;7.3499;7.1819;7.1381;6.987;6.9729;6.864;6.8396;6.8256;6.8121 -;-;-;-;-;-;-;-;-;- 12014 1 1.421 89213.4 1.0 3701 5231 8927 HBL1_DMSO_200M_050219_1,8934 HBL1_DMSO_200M_050219_1,8934,ECKECRKCFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8935 46.907 560.0 247070.0 25 0 12670.0 -1 0 112 1037.974445800579 2073.934338667958 2 1038.478076159954 MULTI CID FTMS 0 0 0 8927 413188.96875 0.4042798536158671 7 -0.53662109375 8 3 GD{I|L}STPDAV{M(Oxidation (M))|F}GN[KP] 14 -1 57.9 0.0 0.0 2.7918 0.0 0.0 657.2764867073296 0.0 657.2764867073296 0.0 7.524306277757645 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.3494850021680094 GD{I|L}STPDAV{M(Oxidation (M))|F}GN[KP] 2.7918 - 9245 + 1 1.421 94607.4 1.0 3702 5231 8927 HBL1_DMSO_200M_050219_1,8935 HBL1_DMSO_200M_050219_1,8935, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8936 46.91 159.0 662070.0 25 0 79268.0 + -1 FELREMVR 8 108 548.282644248066 1094.550735562932 2 548.2833129763603 MULTI CID FTMS 0 0 0 8927 366097.15625 0.2094043690693445 -3 0.2144317626953125 9 Oxidation (M) _FELREM(Oxidation (M))VR_ REV__ENST00000297579.9_1_8:104432557-104433221:+|nuORF 14.838274106304384 0.6917062315640577 3 EHPPEH[HK] 8 -1 50.402 0.0 0.0 4.6048 0.0 0.0 85.08993727851718 0.0 85.08993727851718 0.0 32.64243415186746 0.0 0.0 0 2.2134679910804405 0.0 0.75 0.0 EHPPEH[HK] 4.6048 - 795 1 1.421 88727.3 1.0 3703 5231 8927 HBL1_DMSO_200M_050219_1,8936 HBL1_DMSO_200M_050219_1,8936,FELREMVR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8937 46.918 478.0 359830.0 25 0 20242.0 -1 FCCLGFIALAY 11 132 639.3042132625311 1276.593873591862 2 639.3035766482353 MULTI CID FTMS 0 0 0 8927 319105.9375 0.7494059142902015 -1 0.0654754638671875 10 Carbamidomethyl (C) _FC(Carbamidomethyl (C))CLGFIALAY_ ENSG00000244242|ENST00000340134|IFITM10 15.847184025352805 0.7055071256943262 3 YY[CS]AKE{I|L}VVC 11 -1 + 37.349 0.0 0.0 2.9257 2.9257 70.899 0.0 0.0 0.0 7.132160824356404 1.804560644581315 1.804560644581315 2.544873321858496 0 0.5228787452803376 0.0 0.5 0.2742275032520141 YY[CS]AKE{I|L}VVC;[YR]{I|L}EKC(Carbamidomethyl (C)){M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM};Y[YT]C(Carbamidomethyl (C))KE{I|L}VVC;[YR]{I|L}E[YE]E{I|L}Y;[YR]{I|L}T[QP]{[YC]|[HE]}AY;[YR]{I|L}E[DN]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AY;YY[CS]ART{I|L}VVC;[YR]{I|L}EK[CG]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM};[YR]{I|L}T[QP]A{[YC]|[HE]}Y;[YR]{I|L}TRC(Carbamidomethyl (C)){M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM} 2.9257;2.7263;2.5485;2.37;2.3587;2.2928;2.1113;2.005;1.967;1.912 -;-;-;-;-;-;-;-;-;- 956 + 1 1.421 133153.2 1.0 3704 5231 8927 HBL1_DMSO_200M_050219_1,8937 HBL1_DMSO_200M_050219_1,8937,FCCLGFIALAY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8938 46.927 509.0 319010.0 25 0 38517.0 + 7866 ELLPHATAPDL 11 123 588.8184547503355 1175.622356567471 2 589.3190795779228 MULTI CID FTMS 0 0 0 8927 246672.125 0.7400886492821565 -1 0.0654754638671875 11 Unmodified _ELLPHATAPDL_ REV__ENSG00000146755|ENST00000333149|TRIM50;REV__nc|ENSG00000146755|Q86XT4-2|TRIM50 17.11289562659939 0.6791789249425932 3 VGA{I|L}DP 6 -1 39.374 0.0 0.0 3.3492 0.0 0.0 605.3195134051647 0.0 605.3195134051647 0.0 17.347537454989208 0.0 0.0 0 0.0 0.0 1.4679001828205482 0.0 VGA{I|L}DP 3.3492 - 884 + 1 1.421 125772.2 1.0 3705 5231 8927 HBL1_DMSO_200M_050219_1,8938 HBL1_DMSO_200M_050219_1,8938,ELLPHATAPDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8939 46.937 526.0 431150.0 25 0 70233.0 6761 EDVKLGMTRGQ 11 129 617.3148308937765 1232.615108854353 2 617.3126098513603 MULTI CID FTMS 0 0 0 8927 238749.9375 0.3460303245837761 -1 0.0654754638671875 12 Unmodified _EDVKLGMTRGQ_ nc|ENSG00000243649|P00751-2|CFB 22.736283301280096 0.5583477779825423 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VV[YV]VE{I|L} 9 8 44.627 0.0 0.0 3.6205 0.0 0.0 0.0 184.05354107081408 184.05354107081408 14.779988908013031 0.0 0.0 0.0 0 0.0 0.0 1.9731975075880328 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VV[YV]VE{I|L} 3.6205 - 1961 1 1.421 169286.1 1.0 3706 5231 8927 HBL1_DMSO_200M_050219_1,8939 HBL1_DMSO_200M_050219_1,8939,EDVKLGMTRGQ False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 8940 46.946 549.0 731080.0 25 0 46305.0 + 35091 SQVGPVNENV 10 252 521.7605257120762 1041.5064984909525 2 521.7595092654228 MULTI CID FTMS 0 0 0 8927 153582.8125 0.2075782480009826 -1 0.0654754638671875 13 Unmodified _SQVGPVNENV_ ENSG00000075292|ENST00000264447|ZNF638;ENST00000492262.1_1_2:71654468-71655831:+|nuORF;nc|ENSG00000075292|Q14966-3|ZNF638;nc|ENSG00000075292|Q14966-5|ZNF638 57.10758569107544 0.0441734977746303 3 {[QS]|[NT]}VGPV{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]} 10 0 + 47.532 0.0 0.0 4.5638 4.5638 84.413 0.0 0.0 0.0 15.394968550819328 25.27284532278144 15.394968550819328 11.867880254518738 0 1.1590970050269638 0.638272163982407 0.8901668265424344 0.7803695511246984 + + {[QS]|[NT]}VGPV{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]};{[QS]|[NT]}VG[HC][KA]{[NV]|[RG]};[AG]SVGPV{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]};{[QS]|[NT]}V[C(Carbamidomethyl (C))H][KA]{[NV]|[RG]};{[QS]|[NT]}V[HC]G[KA]{[NV]|[RG]};{[QS]|[NT]}V[HV]NQ[KC];{[TV]|[{I|L}S]}NGPV{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]};{[QV]|[N{I|L}]|[RA]|[KV]}SGPV{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]};{[QS]|[NT]}V[HC][KQ]{[NV]|[RG]};[KG]EGPV{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]} 4.5638;3.4243;2.9996;2.978;2.7381;2.6377;2.2336;2.2051;2.0989;2.0577 +;-;-;-;-;-;-;-;-;- + 8223 1 1.421 314577.0 1.0 3707 5231 8927 HBL1_DMSO_200M_050219_1,8940 HBL1_DMSO_200M_050219_1,8940,SQVGPVNENV True True SQVGPVNENV 46.946147 521.759509265423 5767329.5 8927.0 ENST00000492262.1_1_2:71654468-71655831:+|nuORF;;nc|ENSG00000075292|Q14966-5|ZNF638;;nc|ENSG00000075292|Q14966-3|ZNF638;;ENSG00000075292|ENST00000264447|ZNF638 6.965364456176758 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8941 46.961 766.0 103450.0 25 0 10143.0 -1 CCCYCFFFFFL 11 90 807.3044087599562 1612.5942645867124 2 807.3062011599541 MULTI CID FTMS 0 0 0 8927 125355.6484375 1.0 0 0.0 14 3 Carbamidomethyl (C) _CC(Carbamidomethyl (C))C(Carbamidomethyl (C))YC(Carbamidomethyl (C))FFFFFL_ ENST00000494000.1_1_3:172048292-172052928:+|nuORF 0.3506318815782774 0.8734936314171269 3 CYY 3 -1 29.693 0.0 0.0 1.8413 0.0 0.0 0.0 1180.4240310841942 1180.4240310841942 16.197887582883936 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 CYY 1.8413 - 128 + 1 1.421 59744.0 1.0 3708 5231 8927 HBL1_DMSO_200M_050219_1,8941 HBL1_DMSO_200M_050219_1,8941,CCCYCFFFFFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8942 46.972 650.0 91356.0 25 0 13209.0 -1 0 92 600.0000341176942 1796.9782729532826 3 600.0001708865166 MULTI CID FTMS 0 0 0 8927 119622.7265625 0.0704209584776303 -7 0.6076278686523438 15 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SD{[VA]|[{I|L}G]}AH{I|L} 12 -1 22.686 0.0 0.0 1.2625 0.0 0.0 0.0 485.2380465143188 485.2380465143188 7.725468765256167 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SD{[VA]|[{I|L}G]}AH{I|L} 1.2625 - 173 + 1 1.421 52788.0 1.0 3709 5231 8927 HBL1_DMSO_200M_050219_1,8942 HBL1_DMSO_200M_050219_1,8942, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8943 46.986 800.0 59109.0 25 0 3699.8 -1 0 71 995.3447143435478 0 995.3447143435478 PEAK CID FTMS 0 0 0 -1 0 16 3 PK 2 -1 5.9691 0.0 0.0 0.30015 0.0 0.0 1512.400566527136 248.1046846979125 1760.5052512250486 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PK 0.30015 - 45 + 1 1.421 39741.9 0.8799999952316284 3710 5231 8927 HBL1_DMSO_200M_050219_1,8943 HBL1_DMSO_200M_050219_1,8943, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8945 46.99 44.0 1375500.0 25 0 171660.0 + 13934 HYIDRVRAL 9 64 381.5525235952882 1141.6357413860646 3 381.5523559451103 MULTI CID FTMS 0 0 0 8944 1003737.75 0.4209656451143955 2 -0.1411056518554687 1 Unmodified _HYIDRVRAL_ ENSG00000176619|ENST00000325327|LMNB2 17.44264345198275 0.3645313841742926 3 HY{NN|[MP]|[D{I|L}]|[EV]}R 5 4 47.263 0.0 0.0 4.1399 0.0 0.0 0.0 454.27732263736567 454.27732263736567 26.29370928348408 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + HY{NN|[MP]|[D{I|L}]|[EV]}R 4.1399 + + 23 + 1 1.421 57711.1 1.0 3711 5232 8944 HBL1_DMSO_200M_050219_1,8945 HBL1_DMSO_200M_050219_1,8945,HYIDRVRAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8946 46.991 57.0 550950.0 25 0 78791.0 + -1 YSYMRDYYDRQ 11 60 788.3313160096865 1574.6480790861729 2 788.3325073122978 MULTI CID FTMS 0 0 0 8944 924045.75 0.5652522856334083 1 -0.0638465881347656 2 Oxidation (M) _YSYM(Oxidation (M))RDYYDRQ_ REV__ENSG00000092199|ENST00000553300|HNRNPC;REV__ENST00000556181.1_1_14:58988169-58988316:+|nuORF;REV__nc|ENSG00000092199|P07910-3|HNRNPC;REV__nc|ENSG00000092199|P07910-4|HNRNPC;REV__nc|ENSG00000092199|P07910|HNRNPC 1.3295316138638542 0.8688751186870782 3 {[CP]|[EA]}[DN]YTQQA 9 -1 19.828 0.0 0.0 1.2592 0.0 0.0 0.0 551.2115916196291 551.2115916196291 11.583917215014294 0.0 0.0 0.0 0 0.0 0.0 0.7134679910804405 0.6549471895720985 {[CP]|[EA]}[DN]YTQQA 1.2592 - 82 1 1.421 27813.7 1.0 3712 5232 8944 HBL1_DMSO_200M_050219_1,8946 HBL1_DMSO_200M_050219_1,8946,YSYMRDYYDRQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8947 46.993 2.4 18179000.0 25 0 1838300.0 + 24960 MPPPPPQGV 9 74 460.2385793050109 918.462605676822 2 460.2391540408134 MULTI CID FTMS 0 0 0 8944 22955354.0 0.7625500076270434 9 -0.704315185546875 3 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 67.03532852164291 0.0222449892513529 3 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 45.015 0.0 0.0 4.9011 4.9011 85.282 0.0 0.0 0.0 3.979400086720375 25.806817602088813 3.979400086720375 11.020599913279623 0 1.5629529932484498 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{[HG]|PP}NNPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;[VG][EP]HPQR;{[HG]|PP}GGNPPQR;{[HG]|PP}NGGPPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQGV;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;{[HG]|PP}GGGGPPQR 4.9011;3.7012;3.5941;2.8654;2.6928;2.6928;2.4354;2.075;1.7606;1.6902 -;-;+;-;-;-;-;-;-;- + 176 1 1.421 39377.4 1.0 3713 5232 8944 HBL1_DMSO_200M_050219_1,8947 HBL1_DMSO_200M_050219_1,8947,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8948 46.994 16.0 3835200.0 25 0 379180.0 + 6454 EAFKNRMEV 9 80 375.1902775234476 1122.5490031705428 3 375.1899597048759 MULTI CID FTMS 0 0 0 8944 2999435.0 0.922441004936604 -3 0.2272415161132812 4 Unmodified _EAFKNRMEV_ ENSG00000123562|ENST00000441076|MORF4L2 8.155526934196011 0.6299788542272896 3 YE[TA]KE 6 6 20.891 0.0 0.0 1.861 0.0 0.0 0.0 398.1632174127563 398.1632174127563 6.286531417686092 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YE[TA]KE 1.861 - 348 + 1 1.421 57384.1 1.0 3714 5232 8944 HBL1_DMSO_200M_050219_1,8948 HBL1_DMSO_200M_050219_1,8948,EAFKNRMEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8949 46.995 24.0 2269700.0 25 0 227620.0 4418 DAVSVVDVS 9 76 445.7266264161085 889.4386998990169 2 445.7269775271416 MULTI CID FTMS 0 0 0 8944 2586101.25 1.0 0 0.0 5 Unmodified _DAVSVVDVS_ ENST00000504218.5_1_4:76439611-76439725:+|nuORF 26.88365393820708 0.1891292719743517 3 {[DA]|[EG]}VSV 5 4 40.476 0.0 0.0 4.5508 0.0 0.0 0.0 415.1827544246607 415.1827544246607 19.630091858003187 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.7059771852360797 0.0 + {[DA]|[EG]}VSV 4.5508 + + 74 1 1.421 45883.8 1.0 3715 5232 8944 HBL1_DMSO_200M_050219_1,8949 HBL1_DMSO_200M_050219_1,8949,DAVSVVDVS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8950 46.996 60.0 844160.0 25 0 163550.0 + -1 FGSEYGEDCKC 11 72 676.2493798679646 1350.4842068027292 2 676.2501098513603 MULTI CID FTMS 0 0 0 8944 1275410.875 0.4696989407926222 -3 0.2272415161132812 6 2 Carbamidomethyl (C) _FGSEYGEDC(Carbamidomethyl (C))KC(Carbamidomethyl (C))_ REV__ENSG00000166147|ENST00000316623|FBN1 7.101721422024254 0.8416415510090076 3 {M(Oxidation (M))|F}YEN{I|L}E{[WS]|[C(Carbamidomethyl (C)){I|L}]} 8 -1 44.73 0.0 0.0 3.3121 0.0 0.0 264.0238514630875 0.0 264.0238514630875 0.0 30.750481569446748 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 {M(Oxidation (M))|F}YEN{I|L}E{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.3121 - 148 1 1.421 43022.9 1.0 3716 5232 8944 HBL1_DMSO_200M_050219_1,8950 HBL1_DMSO_200M_050219_1,8950,FGSEYGEDCKC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8951 46.998 60.0 1044700.0 25 0 60412.0 + 6455 EAFKNRMEV 9 74 562.2819230922047 1122.5492932512093 2 562.2817870974541 MULTI CID FTMS 0 0 0 8944 1178439.125 1.0 0 0.0 7 Unmodified _EAFKNRMEV_ ENSG00000123562|ENST00000441076|MORF4L2 27.088373467376528 0.1865245257266215 3 EA{M(Oxidation (M))|F}KN 5 4 58.488 0.0 0.0 5.2103 0.0 0.0 0.0 530.2404879205686 530.2404879205686 35.56425027550688 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.3807196863200844 + EA{M(Oxidation (M))|F}KN 5.2103 + + 163 + 1 1.421 56232.7 1.0 3717 5232 8944 HBL1_DMSO_200M_050219_1,8951 HBL1_DMSO_200M_050219_1,8951,EAFKNRMEV False True EAFKNRMEV 46.997991 562.281787097454 8399907.0 8944.0 ENSG00000123562|ENST00000441076|MORF4L2 4.890468120574951 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8952 47.0 70.0 1579800.0 25 0 157770.0 + 41042 VMINKATPY 9 113 518.7780644346672 1035.5415759361342 2 518.7785522341728 MULTI CID FTMS 0 0 0 8944 1085528.5 0.093398576111345 -2 0.179351806640625 8 Unmodified _VMINKATPY_ ENSG00000170906|ENST00000485876|NDUFA3 47.74868867922204 0.0453060283459952 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VA{I|L}MVPY 9 6 + 51.843 0.0 0.0 5.0064 5.0064 81.63 0.0 0.0 0.0 6.504697682456353 18.34327540797269 6.504697682456353 6.588257071173729 0 1.079689690656103 1.3010299956639813 1.363364334130467 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VA{I|L}MVPY;{[QN]|[E{I|L}]|[KN]}TA{I|L}MVPY;{[QV]|[N{I|L}]|[RA]|[KV]}KATM{M(Oxidation (M))|F}[DP];{[QN]|[E{I|L}]|[KN]}AT{I|L}MVPY;{[QV]|[N{I|L}]|[RA]|[KV]}KATETPY;{[QN]|[E{I|L}]|[KN]}{I|L}ATMVPY;{[QV]|[N{I|L}]|[RA]|[KV]}KATMVPY;[KA]TN{I|L}MVPY;{[ET]|[MV]}{I|L}N[KA]TPY;{[QN]|[E{I|L}]|[KN]}A{I|L}TMVPY 5.0064;4.3702;4.2395;4.2334;4.2069;4.1584;4.1108;4.0155;3.8819;3.8553 -;-;-;-;-;-;-;-;+;- + 1949 1 1.421 90756.2 1.0 3718 5232 8944 HBL1_DMSO_200M_050219_1,8952 HBL1_DMSO_200M_050219_1,8952,VMINKATPY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8953 47.001 57.0 1600700.0 25 0 253170.0 18564 LAAKAAGV 8 109 350.7213210693739 699.4280892055478 2 350.7209960818291 MULTI CID FTMS 0 0 0 8944 902104.0 0.1321813682681724 -3 0.2272415161132812 9 Unmodified _LAAKAAGV_ ENSG00000104714|ENST00000262109|ERICH1 10.183394434864962 0.7604730176254005 3 [{I|L}A]{I|L}ERV 6 5 + 52.734 0.0 0.0 7.5396 7.5396 82.0 0.0 0.0 0.0 26.478174818886373 1.0473535052001282 1.0473535052001282 1.0473535052001282 0 0.4247425010840047 2.0 0.0 0.3494850021680094 [{I|L}A]{I|L}ERV;[{I|L}A]{I|L}EVR;[{I|L}A]V{I|L}ER;[{I|L}A]{I|L}VER 7.5396;7.3899;6.1698;5.3473 -;-;-;- 76 + 1 1.421 79623.8 1.0 3719 5232 8944 HBL1_DMSO_200M_050219_1,8953 HBL1_DMSO_200M_050219_1,8953,LAAKAAGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8954 47.003 75.0 754270.0 25 0 53036.0 + 38676 TTLERTEGL 9 88 510.2722866871538 1018.5300204411076 2 510.2721740603447 MULTI CID FTMS 0 0 0 8944 806935.375 0.8828500506934094 -2 0.179351806640625 10 Unmodified _TTLERTEGL_ ENSG00000134001|ENST00000256383|EIF2S1 41.95555342248728 0.0647214845423414 3 TT{I|L}ES[W{I|L}]G{I|L} 9 3 + 68.783 0.0 0.0 6.7532 6.7532 80.066 0.0 0.0 0.0 47.05182101459236 5.41833743429045 5.41833743429045 1.2371250542002343 0 0.8494850021680094 2.0 0.4247425010840047 0.0 TT{I|L}ES[W{I|L}]G{I|L};TT{I|L}ESA{[RE]|[WV]}{I|L};TT{I|L}SE[W{I|L}]G{I|L};TT{I|L}ESA{[QN]|[E{I|L}]|[KN]}R;TT{I|L}SEA{[RE]|[WV]}{I|L};TT{I|L}ES[W{I|L}]AV;TT{I|L}ESA[W{I|L}]V;TT{I|L}SEA{[QN]|[E{I|L}]|[KN]}R;TT{I|L}SE[W{I|L}]AV;TT{I|L}SEA[W{I|L}]V 6.7532;6.6317;6.2847;6.2135;6.1633;6.1447;6.0232;5.7451;5.6762;5.5548 -;-;-;-;-;-;-;-;-;- 365 + 1 1.421 50480.2 1.0 3720 5232 8944 HBL1_DMSO_200M_050219_1,8954 HBL1_DMSO_200M_050219_1,8954,TTLERTEGL True True TTLERTEGL 47.002824 510.272174060345 6567553.0 8944.0 ENSG00000134001|ENST00000256383|EIF2S1 6.311604181925456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8955 47.005 117.0 596610.0 25 0 94634.0 + 29737 QPMPTSPGV 9 102 457.2261666644383 912.4377803956768 2 457.2263671755791 MULTI CID FTMS 0 0 0 8944 793290.875 0.3712526821711956 5 -0.3560218811035156 11 Unmodified _QPMPTSPGV_ ENSG00000104738|ENST00000649973|MCM4 34.10243960390752 0.1078313939113124 3 [PG]VCYS 6 7 20.631 0.0 0.0 2.2611 0.0 0.0 0.0 303.1605336517892 303.1605336517892 1.1054286672510187 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.3252574989159953 0.0 [PG]VCYS 2.2611 - 370 1 1.421 56878.2 1.0 3721 5232 8944 HBL1_DMSO_200M_050219_1,8955 HBL1_DMSO_200M_050219_1,8955,QPMPTSPGV True True QPMPTSPGV 47.00527 457.226367175579 26575178.0 8944.0 ENSG00000104738|ENST00000649973|MCM4 5.942010720570882 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8956 47.007 78.0 771610.0 25 0 79069.0 + 39431 VAMNPTNTV 9 99 473.7368276044143 945.4591022756288 2 473.7368957400322 MULTI CID FTMS 0 0 0 8944 673184.4375 0.5842393939808153 2 -0.1411056518554687 12 Unmodified _VAMNPTNTV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 28.486842064014134 0.1687311288560894 3 {[VA]|[{I|L}G]}[MN]G{M(Oxidation (M))|F}P 7 5 23.561 0.0 0.0 2.492 0.0 0.0 0.0 226.0823071918974 226.0823071918974 9.805906063131715 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.0 0.0 {[VA]|[{I|L}G]}[MN]G{M(Oxidation (M))|F}P 2.492 - 552 1 1.421 53747.1 1.0 3722 5232 8944 HBL1_DMSO_200M_050219_1,8956 HBL1_DMSO_200M_050219_1,8956,VAMNPTNTV False True VAMNPTNTV 47.007045 473.736895740032 8469947.0 8944.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 4.705210606257121 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8957 47.009 116.0 563960.0 25 0 38643.0 + 2114 APTPAQAQI 9 102 448.7454198362124 895.4762867392247 2 448.7452575564384 MULTI CID FTMS 0 0 0 8944 527521.875 0.4302254705956653 -3 0.2272415161132812 13 Unmodified _APTPAQAQI_ ENSG00000165417|ENST00000553612|GTF2A1;ENST00000298173.7_1_14:81646569-81676264:-|nuORF;nc|ENSG00000165417|P52655-2|GTF2A1 64.23631603340823 0.0237365939569086 3 [TP]PAAGAAQ{I|L} 10 4 + 54.453 0.0 0.0 6.0809 6.0809 79.847 0.0 0.0 0.0 8.679684078620227 36.52077183811208 8.679684078620227 2.368507712272546 0 0.6237125054200234 0.638272163982407 2.1989700043360187 0.0 [TP]PAAGAAQ{I|L};[TP]PAQAAQ{I|L};[TP]PAAQAQ{I|L};[PA][TP]AGAAQ{I|L};[PA][TP]QAAQ{I|L};[PA][TP]AQAQ{I|L};[QA][TP]PAAQ{I|L};[TP]PA[VG]NQ{I|L};[PA][QT]PAAQ{I|L};[TP][QA]PAAQ{I|L} 6.0809;5.8164;5.6738;4.5668;4.3024;4.1598;3.2588;2.9301;2.8464;2.3805 -;-;-;-;-;+;-;-;-;- + 451 1 1.421 58967.3 1.0 3723 5232 8944 HBL1_DMSO_200M_050219_1,8957 HBL1_DMSO_200M_050219_1,8957,APTPAQAQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8958 47.017 408.0 612030.0 25 0 62353.0 + 45869 YYQTIGNHASY 11 141 658.7988147509628 1315.5830765687256 2 658.8003417849541 MULTI CID FTMS 0 0 0 8944 491156.6875 0.6120648597353586 -3 0.2272415161132812 14 Unmodified _YYQTIGNHASY_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF;nc|ENSG00000185627|Q9UNM6-2|PSMD13 104.48436234954404 0.0055741972225795 3 YYQT{I|L}GNPH[HS] 11 3 + 109.52 0.0 0.0 8.3245 8.3245 90.006 0.0 0.0 0.0 21.63526297625081 5.7530272850235065 5.7530272850235065 5.7530272850235065 0 1.341129063296272 2.0 1.9489700043360187 0.9896518287104438 YYQT{I|L}GNPH[HS];YYQT{I|L}GN[HA]SY;YY[AG]T{I|L}GNPH[HS];YYQTG{I|L}NPH[HS];YYQT{I|L}GN{M(Oxidation (M))|F}S[HS];YYQTGQVPH[HS];YYQT{I|L}GNNA{[WS]|[C(Carbamidomethyl (C)){I|L}]};YYQT{I|L}GGGPH[HS];YY[AG]T{I|L}GN[HA]SY;YYQTG{I|L}N[HA]SY 8.3245;7.8872;7.6306;7.5897;7.561;7.5456;7.4045;7.2585;7.1933;7.1524 -;+;-;-;-;-;-;-;-;- + 48850 + 1 1.421 180408.8 1.0 3724 5232 8944 HBL1_DMSO_200M_050219_1,8958 HBL1_DMSO_200M_050219_1,8958,YYQTIGNHASY True True YYQTIGNHASY 47.016778 658.800341784954 5708907.5 8944.0 ENST00000527047.5_1_11:237024-247462:+|nuORF;;ENSG00000185627|ENST00000532097|PSMD13;;nc|ENSG00000185627|Q9UNM6-2|PSMD13 7.979147434234619 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8959 47.02 142.0 699340.0 25 0 45995.0 + 4131 DAPELSHV 8 121 434.21451659026 866.41448024732 2 434.2151367068291 MULTI CID FTMS 0 0 0 8944 460420.34375 1.0 0 0.0 15 Unmodified _DAPELSHV_ ENSG00000241973|ENST00000255882|PI4KA;nc|ENSG00000241973|P42356-2|PI4KA 32.116972079565 0.368454113111938 3 {[DA]|[EG]}P[{M(Oxidation (M))|F}V]YGV 8 4 + 38.836 0.0 0.0 4.4824 4.4824 70.976 0.0 0.0 0.0 15.127108334148003 5.674100046527357 5.674100046527357 0.2680249241196719 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {[DA]|[EG]}P[{M(Oxidation (M))|F}V]YGV;{[DA]|[EG]}PE{[TV]|[{I|L}S]}HV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}QRGV;{[DA]|[EG]}P[{M(Oxidation (M))|F}V][TA]{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}[AG]RGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TA]PYGV;W[MD]{I|L}R{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}][KC]ASGV;W[{M(Oxidation (M))|F}V]P[YR];WC[KQ]R{M(Oxidation (M))|F} 4.4824;4.4514;2.5462;2.1881;1.4693;1.4693;1.352;1.3213;0.91236;0.80131 -;+;-;-;-;-;-;-;-;- + 287 + 1 1.421 80200.8 1.0 3725 5232 8944 HBL1_DMSO_200M_050219_1,8959 HBL1_DMSO_200M_050219_1,8959,DAPELSHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8960 47.027 434.0 403390.0 25 0 25760.0 + 31205 RLQESVMEA 9 175 531.7665470666808 1061.5185412001615 2 531.7665893435478 MULTI CID FTMS 0 0 0 8944 404457.71875 1.0 0 0.0 16 Unmodified _RLQESVMEA_ ENSG00000164754|ENST00000297338|RAD21 49.55428908609986 0.0413471690215031 3 ESVMEA 6 3 51.089 0.0 0.0 4.8128 0.0 0.0 397.24324233222814 0.0 397.24324233222814 0.0 37.06553016182215 0.0 0.0 0 0.8807196863200843 0.0 0.75 0.0 + ESVMEA 4.8128 + + 978 1 1.421 137372.9 1.0 3726 5232 8944 HBL1_DMSO_200M_050219_1,8960 HBL1_DMSO_200M_050219_1,8960,RLQESVMEA True True RLQESVMEA 47.027368 531.766589343548 2831584.25 8944.0 ENSG00000164754|ENST00000297338|RAD21 5.576546510060628 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8961 47.031 167.0 489190.0 25 0 43205.0 + 22209 LPQSEKPVL 9 101 505.7972680726174 1009.5799832120348 2 505.7975952029228 MULTI CID FTMS 0 0 0 8944 391428.34375 0.5334315586957085 4 -0.2803688049316406 17 Unmodified _LPQSEKPVL_ REV__ENST00000549766.5_1_9:101904970-101907043:+|nuORF 26.268140514670165 0.1969607489560049 3 {I|L}PV 3 -1 47.619 0.0 0.0 4.7168 0.0 0.0 0.0 697.3575533502561 697.3575533502561 28.634993639681312 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PV 4.7168 - 307 + 1 1.421 72139.4 1.0 3727 5232 8944 HBL1_DMSO_200M_050219_1,8961 HBL1_DMSO_200M_050219_1,8961,LPQSEKPVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8962 47.034 159.0 861610.0 25 0 89573.0 + 9578 FLISGKPEGR 10 129 368.5454809568479 1102.6146134707435 3 368.5450012087822 MULTI CID FTMS 0 0 0 8944 394641.75 1.0 0 0.0 18 Unmodified _FLISGKPEGR_ ENSG00000230657|ENST00000279575|PRB4;nc|ENSG00000230657|P10163|PRB4 17.44264345198275 0.5548713957087773 3 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KGS{I|L}{[QN]|[E{I|L}]|[KN]} 10 8 + 33.975 0.0 0.0 3.0813 3.0813 76.343 0.0 0.0 0.0 6.522496736287451 19.99545604461879 6.522496736287451 6.618992300264171 0 0.3807196863200844 1.0 0.3054621874040891 0.0 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KGS{I|L}{[QN]|[E{I|L}]|[KN]};[KG]S{[QG]|[NA]}KGS{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SGKYY{I|L};[PG][R{M(Oxidation (M))|F}]KGS{I|L}{[QN]|[E{I|L}]|[KN]};[KG]S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}S{I|L}{[QN]|[E{I|L}]|[KN]};[KG]S[KG]QGS{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SGK{[NV]|[RG]}[EP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SQ{M(Oxidation (M))|F}[H{I|L}]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SGK[RP]{[DA]|[EG]};{[TV]|[{I|L}S]}{[QS]|[NT]}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}{[QN]|[E{I|L}]|[KN]} 3.0813;2.481;2.1474;2.1096;2.0443;1.935;1.8973;1.7133;1.6586;1.2674 -;-;-;-;-;-;-;-;-;- 726 1 1.421 115968.3 1.0 3728 5232 8944 HBL1_DMSO_200M_050219_1,8962 HBL1_DMSO_200M_050219_1,8962,FLISGKPEGR False True FLISGKPEGR 47.033757 368.545001208782 2517822.75 8944.0 ENSG00000230657|ENST00000279575|PRB4;;nc|ENSG00000230657|P10163|PRB4 4.973353544871013 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8963 47.044 569.0 282260.0 25 0 18398.0 20808 LLVYGMPLQPR 11 124 643.8656870820383 1285.7168212308766 2 643.8666869997978 MULTI CID FTMS 0 0 0 8944 217136.828125 0.3321679643840494 8 -0.6446380615234375 19 Unmodified _LLVYGMPLQPR_ ENST00000533428.2_1_15:97300531-97301611:+|nuORF 18.1463463914782 0.6576820063886638 3 {I|L}{I|L}VVYP 6 7 53.505 0.0 0.0 4.1615 0.0 0.0 0.0 598.2730806940061 598.2730806940061 16.81002665998087 0.0 0.0 0.0 0 1.2614393726401687 1.6989700043360187 0.0 0.0 {I|L}{I|L}VVYP 4.1615 - 590 + 1 1.421 124330.7 1.0 3729 5232 8944 HBL1_DMSO_200M_050219_1,8963 HBL1_DMSO_200M_050219_1,8963,LLVYGMPLQPR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 8964 47.05 247.0 484210.0 25 0 31655.0 + 29153 QFIGNRREL 9 132 378.2122104203009 0 378.2122070193291 PEAK CID FTMS 0 0 0 8944 197540.25 0.3603789364944441 -2 0.179351806640625 20 Unmodified _QFIGNRREL_ ENSG00000101361|ENST00000329276|NOP56;ENST00000480992.5_1_20:2635438-2636687:+|nuORF;ENST00000484998.5_1_20:2635830-2636687:+|nuORF 13.042465956692816 0.2773713495150148 3 G 1 8 6.9897 0.0 0.0 0.92651 0.0 0.0 197.1167293349393 497.2378328912719 694.3545622262112 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 0.92651 + + 34 + 1 1.421 95779.2 1.0 3730 5232 8944 HBL1_DMSO_200M_050219_1,8964 HBL1_DMSO_200M_050219_1,8964,QFIGNRREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8966 47.054 4.0 10769000.0 25 0 753240.0 + 4238 DAPMTPKQI 9 68 500.75994000410094 999.505327075002 2 500.7603332400322 MULTI CID FTMS 0 0 0 8965 11867968.0 0.6113946171370438 1 -0.0772590637207031 1 Unmodified _DAPMTPKQI_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1 53.832793166522166 0.0319663582346103 3 {[DA]|[EG]}PMTPKQ{I|L} 9 0 + 72.661 0.0 0.0 7.2697 7.2697 93.047 0.0 0.0 0.0 58.06812183610028 12.35098348421198 12.35098348421198 12.095442439488105 0 0.6109243748081782 2.0 0.4247425010840047 0.7134679910804405 + + {[DA]|[EG]}PMTPKQ{I|L};{[DA]|[EG]}PMTPK[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}T[KP]{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]};[KP]Q[NS]{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]};[KP]T{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]} 7.2697;6.0595;0.31082;0.088861;0.088861 +;-;-;-;- + 179 + 1 1.421 38209.3 1.0 3731 5233 8965 HBL1_DMSO_200M_050219_1,8966 HBL1_DMSO_200M_050219_1,8966,DAPMTPKQI True True DAPMTPKQI 47.053834 500.760333240032 371883360.0 8965.0 ENSG00000171456|ENST00000375687|ASXL1;;nc|ENSG00000171456|Q8IXJ9-2|ASXL1;;ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant 8.108730792999268 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8967 47.055 20.0 1431600.0 25 0 164350.0 + 34920 SQIPAQPSV 9 58 463.7503613456468 925.4861697580936 2 463.7505981326103 MULTI CID FTMS 0 0 0 8965 2025621.5 0.1776562066136592 3 -0.216522216796875 2 Unmodified _SQIPAQPSV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 17.11289562659939 0.3734572693229295 3 [PS][KP]S 5 5 13.512 0.0 0.0 1.46 0.0 0.0 0.0 426.1974789224092 426.1974789224092 -3.497078989835068 0.0 -3.497078989835068 0.0 0 0.0 1.154901959985743 0.0 0.0 [PS][KP]S 1.46 - 48 1 1.421 28766.4 1.0 3732 5233 8965 HBL1_DMSO_200M_050219_1,8967 HBL1_DMSO_200M_050219_1,8967,SQIPAQPSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8968 47.056 12.0 3333600.0 25 0 536160.0 + 10837 GAAKDLPGV 9 63 414.2347030448252 826.4548531564504 2 414.2346374392509 MULTI CID FTMS 0 0 0 8965 4520769.5 0.6894481601882788 1 -0.0772590637207031 3 Unmodified _GAAKDLPGV_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 32.30548876998284 0.1201446275138228 3 AQPR 4 7 17.833 0.0 0.0 2.1577 0.0 0.0 356.20662123847814 0.0 356.20662123847814 0.0 3.2285636667145496 0.0 0.0 0 0.6150219788552205 0.0 0.0 0.0 AQPR 2.1577 - 101 1 1.421 36946.9 1.0 3733 5233 8965 HBL1_DMSO_200M_050219_1,8968 HBL1_DMSO_200M_050219_1,8968,GAAKDLPGV True True GAAKDLPGV 47.056192 414.234637439251 79649216.0 8965.0 ENSG00000240682|ENST00000393295|ISY1;;nc|ENSG00000240682|Q9ULR0-2|ISY1;;nc|ENSG00000240682|Q9ULR0-1|ISY1 3.129662036895752 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8969 47.057 17.0 3138700.0 25 0 331670.0 + 3219 AWPEKRGEI 9 70 362.529520375864 1084.566731727792 3 362.5293456912041 MULTI CID FTMS 0 0 0 8965 3330824.5 0.589390900269929 5 -0.3588981628417969 4 Unmodified _AWPEKRGEI_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 17.11289562659939 0.3734572693229295 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 5 6 44.253 0.0 0.0 4.0802 0.0 0.0 0.0 485.2477816217407 485.2477816217407 29.78855930516417 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.3807196863200844 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 4.0802 - 44 + 1 1.421 53836.0 1.0 3734 5233 8965 HBL1_DMSO_200M_050219_1,8969 HBL1_DMSO_200M_050219_1,8969,AWPEKRGEI False True AWPEKRGEI 47.057369 362.529345691204 1142023232.0 8965.0 ENSG00000133313|ENST00000324262|CNDP2;;nc|ENSG00000133313|Q96KP4-2|CNDP2;;ENST00000582620.5_1_18:72167208-72179735:+|nuORF 4.245795090993245 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8970 47.059 48.0 1168900.0 25 0 153230.0 + 3228 AWPEQVRLS 9 63 543.2906565684075 1084.5667602036149 2 543.2905151247978 MULTI CID FTMS 0 0 0 8965 1220867.5 0.5881594176541647 4 -0.29217529296875 5 Unmodified _AWPEQVRLS_ REV__ENSG00000140853|ENST00000688547|NLRC5;REV__ENST00000545081.5_1_16:57093337-57116437:+|nuORF;REV__nc|ENSG00000140853|Q86WI3-4|NLRC5;REV__nc|ENSG00000140853|Q86WI3-6|NLRC5 9.38312468134398 0.5871240394367778 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE 4 -1 37.435 0.0 0.0 3.4516 0.0 0.0 0.0 598.332728320497 598.332728320497 35.44531259372398 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE 3.4516 + + 20 + 1 1.421 47432.9 1.0 3735 5233 8965 HBL1_DMSO_200M_050219_1,8970 HBL1_DMSO_200M_050219_1,8970,AWPEQVRLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8971 47.06 52.0 778190.0 25 0 73095.0 + 8977 FASHVSPEV 9 71 486.7428658401039 971.4711787470078 2 486.7429687380791 MULTI CID FTMS 0 0 0 8965 1179152.5 0.1787682474669435 2 -0.0833854675292968 6 Unmodified _FASHVSPEV_ ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3 57.47134341890925 0.0274820932774257 3 {[MS]|[{M(Oxidation (M))|F}A]}SHVSPEV 9 0 + 50.371 0.0 0.0 5.1851 5.1851 89.002 0.0 0.0 0.0 0.7378621416091846 24.68510744290249 0.7378621416091846 44.05094536019676 0 0.4247425010840047 0.0 0.7742275032520141 0.0 + + {[MS]|[{M(Oxidation (M))|F}A]}SHVSPEV;[HS]V{[WT]|[RM]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V;[HV]S{[WT]|[RM]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V 5.1851;0.65061;0.59092 +;-;- + 173 1 1.421 37368.4 1.0 3736 5233 8965 HBL1_DMSO_200M_050219_1,8971 HBL1_DMSO_200M_050219_1,8971,FASHVSPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8972 47.061 46.0 1172600.0 25 0 182050.0 + 38975 TVPVKIDKV 9 80 333.5462795955545 997.6170093868636 3 333.5460082888603 MULTI CID FTMS 0 0 0 8965 828164.1875 0.5747349035996134 -1 0.0638465881347656 7 Unmodified _TVPVKIDKV_ ENSG00000167881|ENST00000307877|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68 22.774965066869 0.2414061210083823 3 {[TV]|[{I|L}S]}PVK{I|L}DKV 9 0 + 63.834 0.0 0.0 6.3986 6.3986 81.995 0.0 0.0 0.0 52.94314826628291 7.71481310934309 7.71481310934309 3.0102999566398125 0 0.3494850021680094 2.0 0.805462187404089 0.0 + + {[TV]|[{I|L}S]}PVK{I|L}DKV;{[TV]|[{I|L}S]}VPK{I|L}DKV;{[TV]|[{I|L}S]}V[{I|L}T]K{I|L}[QP];{[TV]|[{I|L}S]}[{I|L}T]VK{I|L}[QP];{[TV]|[{I|L}S]}[{I|L}T]KV{I|L}[QP] 6.3986;6.0969;2.8245;2.8245;2.648 +;-;-;-;- + 290 + 1 1.421 51719.8 1.0 3737 5233 8965 HBL1_DMSO_200M_050219_1,8972 HBL1_DMSO_200M_050219_1,8972,TVPVKIDKV False True TVPVKIDKV 47.061259 333.54600828886 8198831.0 8965.0 nc|ENSG00000167881|Q9UHB9-4|SRP68;;ENSG00000167881|ENST00000307877|SRP68;;nc|ENSG00000167881|Q9UHB9-2|SRP68 5.7476145426432295 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8973 47.07 512.0 245910.0 25 0 15128.0 -1 0 82 698.1288100974558 3485.607668154279 5 698.3299438357353 MULTI CID FTMS 0 0 0 8965 391822.4375 0.2821171343674216 3 -0.216522216796875 8 3 GTP 3 -1 30.445 0.0 0.0 0.87346 0.0 0.0 3212.477077014288 0.0 3212.477077014288 0.0 20.268024924119672 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 GTP 0.87346 - 50 1 1.421 94555.9 1.0 3738 5233 8965 HBL1_DMSO_200M_050219_1,8973 HBL1_DMSO_200M_050219_1,8973, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8974 47.073 106.0 470630.0 25 0 54937.0 + 18390 KVSSGFSGV 9 90 434.2319236867223 866.4492944402446 2 434.2322570681572 MULTI CID FTMS 0 0 0 8965 348593.21875 0.2711526623658782 -1 0.0638465881347656 9 Unmodified _KVSSGFSGV_ ENSG00000137193|ENST00000373509|PIM1;nc|ENSG00000137193|P11309-2|PIM1 10.823927491677226 0.5436922275383211 3 V 1 8 13.979 0.0 0.0 1.6134 0.0 0.0 749.3697407676844 0.0 749.3697407676844 0.0 3.177418734074564 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.6134 + + 59 + 1 1.421 45898.8 1.0 3739 5233 8965 HBL1_DMSO_200M_050219_1,8974 HBL1_DMSO_200M_050219_1,8974,KVSSGFSGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8975 47.081 507.0 469790.0 25 0 38873.0 + 31911 RTVPEIEKV 9 194 535.8133733762826 1069.612193819365 2 535.8137084841728 MULTI CID FTMS 0 0 0 8965 328096.46875 0.346381858833489 -2 0.1777229309082031 10 Unmodified _RTVPEIEKV_ ENSG00000104884|ENST00000391945|ERCC2;ENST00000586441.1_1_19:45867568-45872241:-|nuORF;nc|ENSG00000104884|P18074-2|ERCC2 45.739877483867886 0.0497104363764649 3 KE{I|L}HAEVK 8 8 46.32 0.0 0.0 4.3306 0.0 0.0 117.08089606721508 0.0 117.08089606721508 0.0 31.16471162884464 0.0 0.0 0 0.1505149978319906 0.0 0.2887254899964357 1.3781446971601314 KE{I|L}HAEVK 4.3306 - 1388 + 1 1.421 180149.3 1.0 3740 5233 8965 HBL1_DMSO_200M_050219_1,8975 HBL1_DMSO_200M_050219_1,8975,RTVPEIEKV True True RTVPEIEKV 47.081484 535.813708484173 11249108.0 8965.0 nc|ENSG00000104884|P18074-2|ERCC2;;ENSG00000104884|ENST00000391945|ERCC2;;ENST00000586441.1_1_19:45867568-45872241:-|nuORF 5.373331228892009 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8976 47.086 233.0 375630.0 25 0 27540.0 + 16353 IYNEVNQTY 9 124 572.2693338416902 1142.5241147501804 2 572.2696411013603 MULTI CID FTMS 0 0 0 8965 263276.0625 0.2349302060890201 -1 0.0638465881347656 11 Unmodified _IYNEVNQTY_ ENSG00000169371|ENST00000308588|SNUPN 25.399314129420983 0.2080152500878129 3 [Y{I|L}]NEV 5 4 24.983 0.0 0.0 2.1866 0.0 0.0 0.0 521.2014578500429 521.2014578500429 6.354881565569137 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [Y{I|L}]NEV 2.1866 + + 403 1 1.421 71316.1 1.0 3741 5233 8965 HBL1_DMSO_200M_050219_1,8976 HBL1_DMSO_200M_050219_1,8976,IYNEVNQTY False True IYNEVNQTY 47.085865 572.26964110136 15144339.0 8965.0 ENSG00000169371|ENST00000308588|SNUPN 5.177937587102254 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8977 47.09 249.0 1457900.0 25 0 149330.0 + 28009 PMPPRTNE 8 170 471.2302739017799 940.4459948703598 2 471.2288696169853 MULTI CID FTMS 0 0 0 8965 276572.65625 0.2346502233363883 17 -1.3812522888183594 12 Unmodified _PMPPRTNE_ REV__ENSG00000101203|ENST00000358894|COL20A1;REV__ENST00000471582.5_1_20:61956720-61961007:+|nuORF;REV__ENST00000479501.5_1_20:61950534-61961007:+|nuORF;REV__nc|ENSG00000101203|Q9P218-2|COL20A1;REV__nc|ENSG00000101203|Q9P218-3|COL20A1 15.847184025352805 0.6768015514314958 3 MPPP 4 -1 59.68 0.0 0.0 6.346 0.0 0.0 0.0 515.2244137343065 515.2244137343065 42.91515211941625 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 MPPP 6.346 - 655 + 1 1.421 277750.0 1.0 3742 5233 8965 HBL1_DMSO_200M_050219_1,8977 HBL1_DMSO_200M_050219_1,8977,PMPPRTNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8978 47.101 605.0 352120.0 25 0 20544.0 + 39145 TYLNQGQSY 9 234 537.2487484093112 1072.4829438854224 2 537.2496826052666 MULTI CID FTMS 0 0 0 8965 219464.421875 0.4582826648993647 1 -0.0772590637207031 13 Unmodified _TYLNQGQSY_ ENSG00000115112|ENST00000263707|TFCP2L1;ENSG00000135457|ENST00000257915|TFCP2;ENSG00000153560|ENST00000283629|UBP1;nc|ENSG00000135457|Q12800-2|TFCP2;nc|ENSG00000135457|Q12800-3|TFCP2;nc|ENSG00000135457|Q12800-4|TFCP2;nc|ENSG00000153560|Q9NZI7-4|UBP1 14.838274106304384 0.4350285940865338 3 [YT]{I|L} 3 6 22.051 0.0 0.0 2.0561 0.0 0.0 0.0 692.2656816673797 692.2656816673797 3.440359212109456 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [YT]{I|L} 2.0561 + + 1355 1 1.421 164869.2 1.0 3743 5233 8965 HBL1_DMSO_200M_050219_1,8978 HBL1_DMSO_200M_050219_1,8978,TYLNQGQSY False True TYLNQGQSY 47.101069 537.249682605267 3385968.75 8965.0 ENSG00000135457|ENST00000257915|TFCP2;;nc|ENSG00000135457|Q12800-4|TFCP2;;ENSG00000115112|ENST00000263707|TFCP2L1;;ENSG00000153560|ENST00000283629|UBP1;;nc|ENSG00000135457|Q12800-3|TFCP2;;nc|ENSG00000135457|Q12800-2|TFCP2;;nc|ENSG00000153560|Q9NZI7-4|UBP1 1.192069487646222 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8979 47.113 689.0 405010.0 25 0 13193.0 + 26203 NQIDHEVTV 9 275 527.7617792516775 1053.5090055701548 2 528.2646362185478 MULTI CID FTMS 0 0 0 8965 162547.546875 0.2133809944469071 -4 0.2910881042480469 14 Unmodified _NQIDHEVTV_ ENSG00000112159|ENST00000369393|MDN1 57.72198328787511 0.0273433238377839 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}QNVTV 9 6 + 52.832 0.0 0.0 5.0148 5.0148 82.142 0.0 0.0 0.0 8.150746782456658 8.072420927871988 8.072420927871988 7.087298416251741 0 1.1677353201839438 2.0 0.0629529932484498 0.5866968715561641 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}QNVTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}VQQVTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}KQECTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[RH]GHTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}[AG]NVTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}QGGVTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}VAANVTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}GHTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}V{[QN]|[E{I|L}]|[KN]}TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[K{I|L}]ECTV 5.0148;4.3421;4.3043;4.2412;4.1408;4.1408;3.9736;3.9554;3.9148;3.7704 -;-;-;-;-;-;-;-;-;- 7968 1 1.421 212947.2 1.0 3744 5233 8965 HBL1_DMSO_200M_050219_1,8979 HBL1_DMSO_200M_050219_1,8979,NQIDHEVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8980 47.127 800.0 712730.0 25 0 143990.0 + 10804 FYSEVHPHY 9 312 393.5133818096469 0 393.5129882693291 PEAK CID FTMS 0 0 0 8965 140321.921875 0.5273329805489437 -1 0.0638465881347656 15 Unmodified _FYSEVHPHY_ ENSG00000159322|ENST00000456471|ADPGK;ENST00000562621.1_1_15:73044684-73048205:-|nuORF;ENST00000567941.5_1_15:73044684-73075795:-|nuORF;ENST00000569534.5_1_15:73044684-73076051:-|nuORF;nc|ENSG00000159322|Q9BRR6-2|ADPGK;nc|ENSG00000159322|Q9BRR6-3|ADPGK;nc|ENSG00000159322|Q9BRR6-4|ADPGK 39.94969957227396 0.061964645358372 3 P 1 8 6.9897 0.0 0.0 0.89039 0.0 0.0 568.8822190862876 116.05101953677968 684.9332386230673 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.89039 + + 111 + 1 1.421 436293.4 0.8700000047683716 3745 5233 8965 HBL1_DMSO_200M_050219_1,8980 HBL1_DMSO_200M_050219_1,8980,FYSEVHPHY True True FYSEVHPHY 47.126861 393.512988269329 1816444.0 8965.0 ENST00000567941.5_1_15:73044684-73075795:-|nuORF;;ENSG00000159322|ENST00000456471|ADPGK;;ENST00000562621.1_1_15:73044684-73048205:-|nuORF;;nc|ENSG00000159322|Q9BRR6-4|ADPGK;;nc|ENSG00000159322|Q9BRR6-2|ADPGK;;nc|ENSG00000159322|Q9BRR6-3|ADPGK;;ENST00000569534.5_1_15:73044684-73076051:-|nuORF 9.977153778076172 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8982 47.131 11.0 4784900.0 25 0 659830.0 + 31330 RMLPHAPGV 9 68 489.2707425835928 976.5269322339856 2 489.2711364626884 MULTI CID FTMS 0 0 0 8981 4789006.0 0.6941501867202234 2 -0.1392631530761718 1 Unmodified _RMLPHAPGV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 26.88365393820708 0.1891292719743517 3 {[WT]|[RM]}{I|L}PHAPR 8 2 + 43.321 0.0 0.0 4.4362 4.4362 86.347 0.0 0.0 0.0 5.484550065040281 32.86297847284061 5.484550065040281 37.316759732431706 0 1.0924778212679485 0.0 0.0 0.0 {[WT]|[RM]}{I|L}PHAPR;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]SEPR 4.4362;0.61481 -;- 55 1 1.421 47629.6 1.0 3746 5234 8981 HBL1_DMSO_200M_050219_1,8982 HBL1_DMSO_200M_050219_1,8982,RMLPHAPGV False True RMLPHAPGV 47.131096 489.271136462688 92359816.0 8981.0 ENSG00000196591|ENST00000519065|HDAC2;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 7.044774055480957 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8983 47.133 85.0 580890.0 25 0 60134.0 + 6534 EALGNVRTV 9 96 479.7695907946123 957.5246286560248 2 479.7696105837822 MULTI CID FTMS 0 0 0 8981 269509.3125 0.0703872956496604 3 -0.2149162292480468 2 Unmodified _EALGNVRTV_ ENSG00000197150|ENST00000358849|ABCB8;ENST00000466514.5_1_7:150731570-150742433:+|nuORF;ENST00000470645.5_1_7:150732911-150733055:+|nuORF;nc|ENSG00000197150|Q9NUT2-3|ABCB8;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-5|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8 43.77239144664712 0.0547478964384323 3 {[CP]|[EA]}{I|L}GNVRTV 9 0 + 52.055 0.0 0.0 5.4364 5.4364 85.871 0.0 0.0 0.0 7.147642715192504 10.211892990699384 7.147642715192504 9.208187539523747 0 0.4247425010840047 0.0 0.2396518287104437 0.3807196863200844 + + {[CP]|[EA]}{I|L}GNVRTV;{[CP]|[EA]}{I|L}GGGVRTV;{[CP]|[EA]}{I|L}GNVRS{I|L};{[CP]|[EA]}{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[PG];{[CP]|[EA]}{I|L}[RN]RTV;{[CP]|[EA]}{I|L}GGGVRS{I|L};{[CP]|[EA]}{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PG]V;{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}VRTV;{[CP]|[EA]}{I|L}G[R{I|L}][NS]V;{[CP]|[EA]}{I|L}{I|L}{[NV]|[RG]}[NS]V 5.4364;4.4748;4.3699;3.5716;3.4304;3.4083;2.9428;2.7184;2.4445;2.4445 +;-;-;-;-;-;-;-;-;- + 212 + 1 1.421 44107.1 1.0 3747 5234 8981 HBL1_DMSO_200M_050219_1,8983 HBL1_DMSO_200M_050219_1,8983,EALGNVRTV True True EALGNVRTV 47.13299 479.769610583782 40731000.0 8981.0 nc|ENSG00000197150|Q9NUT2|ABCB8;;ENST00000470645.5_1_7:150732911-150733055:+|nuORF;;ENSG00000197150|ENST00000358849|ABCB8;;nc|ENSG00000197150|Q9NUT2-5|ABCB8;;nc|ENSG00000197150|Q9NUT2-4|ABCB8;;nc|ENSG00000197150|Q9NUT2-3|ABCB8;;ENST00000466514.5_1_7:150731570-150742433:+|nuORF 6.764569282531738 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8985 47.137 16.0 3271600.0 25 0 419250.0 + 8157 EPPLPLDR 8 69 468.76163118641904 935.508709439638 2 468.7615844607353 MULTI CID FTMS 0 0 0 8984 2631410.75 0.9810249215437714 1 -0.1331367492675781 1 Unmodified _EPPLPLDR_ REV__nc|ENSG00000180448|Q92619-2|ARHGAP45 20.453626601364224 0.6087503291685402 3 [EP]P{I|L} 4 -1 31.541 0.0 0.0 3.3715 0.0 0.0 0.0 496.2539156549438 496.2539156549438 18.44212497064703 0.0 0.0 0.0 0 0.25 1.5228787452803376 0.0 0.0 [EP]P{I|L} 3.3715 + + 44 + 1 1.421 47545.4 1.0 3748 5235 8984 HBL1_DMSO_200M_050219_1,8985 HBL1_DMSO_200M_050219_1,8985,EPPLPLDR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8986 47.139 70.0 1328700.0 25 0 196440.0 + 43070 VYITGKEV 8 88 454.7582437164234 0 454.7571899294853 PEAK CID FTMS 0 0 0 8984 662992.375 0.993191392466976 1 -0.1331367492675781 2 Unmodified _VYITGKEV_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 19.256988751693697 0.4320151646958274 3 {I|L}ETGG 5 6 12.669 0.0 0.0 1.396 0.0 0.0 379.2102607709343 68.05134760074452 447.2616083716789 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6382104921644451 0.0 {I|L}ETGG 1.396 - 235 + 1 1.421 75344.3 1.0 3749 5235 8984 HBL1_DMSO_200M_050219_1,8986 HBL1_DMSO_200M_050219_1,8986,VYITGKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8987 47.14 70.0 707360.0 25 0 64740.0 + 3085 AVNMPLTTV 9 81 473.2589527014579 0 473.2586852908134 PEAK CID FTMS 0 0 0 8984 612718.4375 1.0 0 0.0 3 Unmodified _AVNMPLTTV_ REV__ENSG00000183495|ENST00000389561|EP400;REV__nc|ENSG00000183495|Q96L91-3|EP400;REV__nc|ENSG00000183495|Q96L91-4|EP400;REV__nc|ENSG00000183495|Q96L91-5|EP400;REV__nc|ENSG00000183495|Q96L91|EP400 7.910154910731844 0.3362437653303669 3 G 1 -1 7.034 0.0 0.0 0.74473 0.0 0.0 415.2017300105345 469.2461031549438 884.4478331654783 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 G 0.74473 - 4 + 1 1.421 43403.1 1.0 3750 5235 8984 HBL1_DMSO_200M_050219_1,8987 HBL1_DMSO_200M_050219_1,8987,AVNMPLTTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8988 47.144 164.0 399340.0 25 0 44236.0 + 999 AFYEHAQTY 9 91 565.2508696933867 1128.4871864535733 2 565.2513305544853 MULTI CID FTMS 0 0 0 8984 479321.1875 0.766894957694545 -1 0.0061264038085937 4 Unmodified _AFYEHAQTY_ ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11 71.92227651296345 0.0203558744033348 3 [HV]YTQA{M(Oxidation (M))|F}TY 9 5 + 62.048 0.0 0.0 5.4983 5.4983 87.808 0.0 0.0 0.0 30.21652514092061 14.09256854528806 14.09256854528806 12.703037561203844 0 0.75 0.0 0.7742275032520141 0.3494850021680094 [HV]YTQA{M(Oxidation (M))|F}TY;[HV]YT[AG]A{M(Oxidation (M))|F}TY;[YE]HA{M(Oxidation (M))|F}AQTY;[YE]HA{M(Oxidation (M))|F}AGATY;[YE]HAQ{M(Oxidation (M))|F}ATY;[YE]HAQTY{[MS]|[{M(Oxidation (M))|F}A]};[HV]{[CA]|SS}A{M(Oxidation (M))|F}A{M(Oxidation (M))|F}TY;[QA][NP]A{M(Oxidation (M))|F}A{M(Oxidation (M))|F}TY;[QA][PG]GA{M(Oxidation (M))|F}A{M(Oxidation (M))|F}TY;[YE]HA{M(Oxidation (M))|F}QATY 5.4983;4.3727;4.3274;4.2869;4.1309;4.1262;3.9963;3.7748;3.7381;3.7081 -;-;-;-;-;-;-;-;-;- 1285 + 1 1.421 58824.9 1.0 3751 5235 8984 HBL1_DMSO_200M_050219_1,8988 HBL1_DMSO_200M_050219_1,8988,AFYEHAQTY True True AFYEHAQTY 47.143734 565.251330554485 10447138.0 8984.0 ENSG00000168538|ENST00000334690|TRAPPC11;;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;;ENST00000509857.5_1_4:184585182-184595983:+|nuORF 10.04080613454183 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8989 47.152 491.0 403970.0 25 0 27678.0 + 41771 VPVESPRAI 9 157 484.283036882674 966.551520832148 2 484.2828246951103 MULTI CID FTMS 0 0 0 8984 371101.5 0.5912366959585348 -2 0.0833854675292968 5 Unmodified _VPVESPRAI_ ENSG00000132676|ENST00000368336|DAP3;ENST00000462002.5_1_1:155679570-155696073:+|nuORF;ENST00000471523.1_1_1:155679570-155695881:+|nuORF;ENST00000496863.5_1_1:155679570-155695280:+|nuORF;nc|ENSG00000132676|P51398-3|DAP3 34.40172386719151 0.1061884637610825 3 VPVES 5 4 68.544 0.0 0.0 7.0916 0.0 0.0 0.0 452.2627750487651 452.2627750487651 48.96800592671681 0.0 0.0 0.0 0 0.9163865622122672 2.0 0.3807196863200844 0.0 + VPVES 7.0916 + + 1127 + 1 1.421 152999.1 1.0 3752 5235 8984 HBL1_DMSO_200M_050219_1,8989 HBL1_DMSO_200M_050219_1,8989,VPVESPRAI True True VPVESPRAI 47.152394 484.28282469511 10386612.0 8984.0 nc|ENSG00000132676|P51398-3|DAP3;;ENST00000462002.5_1_1:155679570-155696073:+|nuORF;;ENST00000496863.5_1_1:155679570-155695280:+|nuORF;;ENST00000471523.1_1_1:155679570-155695881:+|nuORF;;ENSG00000132676|ENST00000368336|DAP3 3.2590973178545632 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8990 47.161 489.0 596300.0 25 0 62660.0 + 20801 LLVVYPWTQR 10 114 637.8665930279752 1273.7186331227504 2 637.8670532107353 MULTI CID FTMS 0 0 0 8984 324792.8125 0.1897696319217346 -4 0.2611083984375 6 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 80.6760300276096 0.0165137828474802 3 {I|L}{I|L}VVYPWTQR 10 0 + 106.25 0.0 0.0 8.342 8.342 92.432 0.0 0.0 0.0 29.85985638199878 11.317660248556876 11.317660248556876 8.584620015722379 0 1.5 1.6989700043360187 0.7059771852360797 1.110924374808178 + + {I|L}{I|L}VVYPWTQR;{I|L}{I|L}VVYPWSAAR;{I|L}{I|L}VVYPWT[AG]R;{I|L}{I|L}VVYPW{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K;{I|L}{I|L}VVYPDV[QT]K;{I|L}{I|L}VVYPD{I|L}{[QS]|[NT]}K;{I|L}{I|L}VVYP{[CP]|[EA]}[KS]R;{I|L}{I|L}VVYP[MN][TP]K;{I|L}{I|L}VVYP[MN]{[VA]|[{I|L}G]}R;{I|L}{I|L}VVYP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PS]K 8.342;7.668;7.6225;7.4534;7.3277;7.1535;6.8283;6.4665;6.274;6.2302 +;-;-;-;-;-;-;-;-;- + 960 + 1 1.421 220047.3 1.0 3753 5235 8984 HBL1_DMSO_200M_050219_1,8990 HBL1_DMSO_200M_050219_1,8990,LLVVYPWTQR True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 8991 47.172 610.0 557100.0 25 0 22056.0 -1 0 184 753.8759110836954 3011.474538468381 4 754.3781616091728 MULTI CID FTMS 0 0 0 8984 242015.203125 0.3491282530249044 -4 0.2611083984375 7 3 WW[YG]QA[C(Carbamidomethyl (C))D]NA{I|L}SA{I|L}SD{I|L}HA[HK] 21 -1 91.671 0.0 0.0 3.0441 0.0 0.0 569.2968177841152 0.0 569.2968177841152 0.0 56.22617620499149 0.0 0.0 0 0.3054621874040891 0.0 0.9802046884880936 0.8494850021680094 WW[YG]QA[C(Carbamidomethyl (C))D]NA{I|L}SA{I|L}SD{I|L}HA[HK] 3.0441 - 308764 + 1 1.421 238892.0 1.0 3754 5235 8984 HBL1_DMSO_200M_050219_1,8991 HBL1_DMSO_200M_050219_1,8991, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8992 47.182 573.0 144650.0 25 0 5762.2 -1 KLEQAQEMMK 10 136 634.3026796101326 1266.590806287065 2 634.8043701052666 MULTI CID FTMS 0 0 0 8984 210221.78125 1.0 0 0.0 8 2 Oxidation (M) _KLEQAQEM(Oxidation (M))M(Oxidation (M))K_ ENSG00000164440|ENST00000358430|TXLNB 31.26834338654808 0.266153677697784 3 [AG]K{I|L}EEQA{M(Oxidation (M))|F}ET 11 -1 56.965 0.0 0.0 4.4975 0.0 0.0 0.0 59.97281958135105 59.97281958135105 39.65819692418288 0.0 0.0 0.0 0 0.6861818737241735 1.5228787452803376 1.174742501084005 0.7302046884880937 [AG]K{I|L}EEQA{M(Oxidation (M))|F}ET 4.4975 - 1632 1 1.421 68236.6 1.0 3755 5235 8984 HBL1_DMSO_200M_050219_1,8992 HBL1_DMSO_200M_050219_1,8992,KLEQAQEMMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8993 47.184 96.0 532410.0 25 0 38108.0 + 13875 HVMDETHVI 9 93 540.7624618002314 1079.5103706672628 2 540.7638427615166 MULTI CID FTMS 0 0 0 8984 191525.578125 1.0 0 0.0 9 Unmodified _HVMDETHVI_ ENSG00000075089|ENST00000188312|ACTR6 30.22481116460888 0.1466181017706357 3 [HV]T[C(Carbamidomethyl (C))N]THV{I|L} 9 3 + 50.608 0.0 0.0 4.688 4.688 81.863 0.0 0.0 0.0 8.239087409443187 3.1677903326085755 3.1677903326085755 8.239087409443187 0 0.6237125054200234 2.0 0.4247425010840047 0.0 [HV]T[C(Carbamidomethyl (C))N]THV{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[WM]THV{I|L};{[DA]|[EG]}GPWWHV{I|L};[HT]V[C(Carbamidomethyl (C))N]THV{I|L};{[DA]|[EG]}HH[HD]HV{I|L};{[SA]|[TG]}{[C(Carbamidomethyl (C))G]|[NC]}[HV]THV{I|L};WDQQ[YE]V{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PWWHV{I|L};{[SA]|[TG]}{[C(Carbamidomethyl (C))G]|[NC]}[HT]VHV{I|L};{[DA]|[EG]}GP[YC(Carbamidomethyl (C))][VS]V{I|L} 4.688;3.9248;2.797;2.2302;2.0247;1.4784;1.4648;1.2706;1.1995;1.1086 -;-;-;-;-;-;-;-;-;- 368 1 1.421 45877.7 1.0 3756 5235 8984 HBL1_DMSO_200M_050219_1,8993 HBL1_DMSO_200M_050219_1,8993,HVMDETHVI False True HVMDETHVI 47.183844 540.763842761517 529618.4375 8984.0 ENSG00000075089|ENST00000188312|ACTR6 2.537288576364517 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8994 47.194 578.0 255600.0 25 0 13771.0 + 32377 RYQEDVQQL 9 150 589.7940639191618 1177.5735749051237 2 590.2960082888603 MULTI CID FTMS 0 0 0 8984 200885.765625 1.0 0 0.0 10 Unmodified _RYQEDVQQL_ ENSG00000126001|ENST00000397527|CEP250;nc|ENSG00000126001|Q9BV73-2|CEP250 31.26834338654808 0.1333407332142048 3 [AG]{I|L}E[YQ]EQQ{I|L} 10 6 + 42.299 0.0 0.0 3.5921 3.5921 69.873 0.0 0.0 0.0 5.69023245041474 8.768963092205517 5.69023245041474 1.0134220474816402 0 0.7786596949921221 2.0 0.3807196863200844 0.3494850021680094 [AG]{I|L}E[YQ]EQQ{I|L};[AG][YR]EDVQQ{I|L};[AG]{I|L}E[YG]AEQQ{I|L};[AG]{I|L}E[YQ]E[AG]Q{I|L};[AG][YR]EDV[AG]Q{I|L};[YR]QEDVQQ{I|L};[Q{I|L}]E[YQ]EQQ{I|L};[AG]{I|L}YWAEQQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QVDE[C(Carbamidomethyl (C))R]{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QVDE{[MG]|[TS]}Q{I|L} 3.5921;3.506;3.0045;2.8138;2.7278;2.6636;2.584;2.581;2.5646;2.5598 -;-;-;-;-;+;-;-;-;- + 2579 1 1.421 115080.7 1.0 3757 5235 8984 HBL1_DMSO_200M_050219_1,8994 HBL1_DMSO_200M_050219_1,8994,RYQEDVQQL False True RYQEDVQQL 47.193975 589.795 2415766.75 8984.0 nc|ENSG00000126001|Q9BV73-2|CEP250;;ENSG00000126001|ENST00000397527|CEP250 5.96696408589681 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8995 47.2 280.0 351630.0 25 0 33090.0 11274 GEVCCWLCI 9 136 513.217343590278 1024.420134247356 2 513.2187988162041 MULTI CID FTMS 0 0 0 8984 185893.296875 0.676926321864992 -3 0.1472320556640625 11 Unmodified _GEVCCWLCI_ ENSG00000164082|ENST00000395052|GRM2;ENST00000296479.9_1_3:51747995-51752125:+|nuORF 12.531546534597751 0.4974689918368763 3 {[DA]|[EG]}VVE 5 6 37.452 0.0 0.0 3.656 0.0 0.0 0.0 508.1582073276872 508.1582073276872 19.03598431600421 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.4291746928241126 0.0 {[DA]|[EG]}VVE 3.656 - 294 1 1.421 82382.7 1.0 3758 5235 8984 HBL1_DMSO_200M_050219_1,8995 HBL1_DMSO_200M_050219_1,8995,GEVCCWLCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 8996 47.212 669.0 178630.0 25 0 9432.5 -1 0 135 611.9692706084774 1832.885982425632 3 611.9686767458916 MULTI CID FTMS 0 0 0 8984 180090.0625 0.6314033338734829 -5 0.3265838623046875 12 3 {M(Oxidation (M))|F}ANQ[HD]{M(Oxidation (M))|F}Y 8 -1 40.979 0.0 0.0 2.2358 0.0 0.0 792.4679063402078 0.0 792.4679063402078 0.0 7.881674979229764 0.0 0.0 0 0.0 0.0 0.0 0.7614393726401688 {M(Oxidation (M))|F}ANQ[HD]{M(Oxidation (M))|F}Y 2.2358 - 1670 + 1 1.421 96608.1 1.0 3759 5235 8984 HBL1_DMSO_200M_050219_1,8996 HBL1_DMSO_200M_050219_1,8996, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 8997 47.224 703.0 180460.0 25 0 21011.0 + -1 SALMCHFNWYF 11 139 717.799799419391 1433.585045905582 2 717.8019897341728 MULTI CID FTMS 0 0 0 8984 171354.578125 1.0 0 0.0 13 Oxidation (M) _SALM(Oxidation (M))CHFNWYF_ REV__ENSG00000187736|ENST00000356853|NHEJ1;REV__nc|ENSG00000187736|Q9H9Q4-2|NHEJ1 7.608950283845883 0.8392484121837455 3 [AG]S{M(Oxidation (M))|F}TEAQQDA{M(Oxidation (M))|F}Y 13 -1 + 77.779 0.0 0.0 5.4255 5.4255 82.01 0.0 0.0 0.0 5.494948059746633 10.696083918116416 5.494948059746633 5.494948059746633 0 1.3667053245199623 1.3010299956639813 0.6861818737241735 0.3494850021680094 [AG]S{M(Oxidation (M))|F}TEAQQDA{M(Oxidation (M))|F}Y;{[QS]|[NT]}{M(Oxidation (M))|F}TEAQQDA{M(Oxidation (M))|F}Y;[AG]S{M(Oxidation (M))|F}TEAQQW{M(Oxidation (M))|F}Y;{[SA]|[TG]}G{M(Oxidation (M))|F}TEAQQDA{M(Oxidation (M))|F}Y;[AG]S{M(Oxidation (M))|F}TEAQ[AG]DA{M(Oxidation (M))|F}Y;[AG]S{M(Oxidation (M))|F}TEA[AG]QDA{M(Oxidation (M))|F}Y;[AG]D[YG]EAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}[YN]EAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}G[YG]EAQQDA{M(Oxidation (M))|F}Y;{[QS]|[NT]}{M(Oxidation (M))|F}TEAQQW{M(Oxidation (M))|F}Y 5.4255;5.0422;4.9622;4.8342;4.7926;4.7926;4.7439;4.7019;4.6224;4.581 -;-;-;-;-;-;-;-;-;- 6832 1 1.421 92330.7 1.0 3760 5235 8984 HBL1_DMSO_200M_050219_1,8997 HBL1_DMSO_200M_050219_1,8997,SALMCHFNWYF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8998 47.238 800.0 189010.0 25 0 12405.0 + 35150 SRGRSTTL 8 196 439.24672486610586 0 439.2469360232353 PEAK CID FTMS 0 0 0 8984 143875.375 1.0 0 0.0 14 Unmodified _SRGRSTTL_ REV__ENSG00000139767|ENST00000267260|SRRM4 4.3292370932331545 0.5842320662952245 3 M 1 -1 2.2185 0.0 0.0 0.25311 0.0 0.0 399.21713029686174 343.1886080377563 742.405738334618 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.25311 - 15 + 1 1.421 118988.4 0.959999978542328 3761 5235 8984 HBL1_DMSO_200M_050219_1,8998 HBL1_DMSO_200M_050219_1,8998,SRGRSTTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 8999 47.252 763.0 254610.0 25 0 16734.0 45170 YQKLSKISV 9 252 533.3166689172891 0 533.3166992068291 PEAK CID FTMS 0 0 0 8984 115607.484375 0.8888300383576256 1 -0.1331367492675781 15 Unmodified _YQKLSKISV_ ENSG00000164674|ENST00000611299|SYTL3;nc|ENSG00000164674|Q4VX76-2|SYTL3 14.838274106304384 0.2567717476666951 3 SR 2 8 10.969 0.0 0.0 1.0303 0.0 0.0 117.1588372468844 701.3200925761984 818.4789298230828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SR 1.0303 - 183 + 1 1.421 151688.4 1.0 3762 5235 8984 HBL1_DMSO_200M_050219_1,8999 HBL1_DMSO_200M_050219_1,8999,YQKLSKISV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9000 47.266 786.0 133900.0 25 0 6136.7 + 15123 INENRQFEQIS 11 126 689.3413796726425 1376.6682064120848 2 689.3463012576103 MULTI CID FTMS 0 0 0 8984 128577.453125 0.9065236887698104 -1 0.0061264038085937 16 Unmodified _INENRQFEQIS_ REV__ENSG00000061987|ENST00000393630|MON2;REV__ENST00000547095.5_1_12:62864501-62986526:+|nuORF;REV__ENST00000551307.5_1_12:62954224-62986526:+|nuORF;REV__nc|ENSG00000061987|Q7Z3U7-2|MON2;REV__nc|ENSG00000061987|Q7Z3U7-3|MON2;REV__nc|ENSG00000061987|Q7Z3U7-5|MON2;REV__nc|ENSG00000061987|Q7Z3U7-6|MON2 67.08073823543168 0.0408645806987127 3 {I|L}NEA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}RW{I|L}QS 11 -1 + 87.544 0.0 0.0 6.3591 6.3591 91.132 0.0 0.0 0.0 15.1819449803655 15.1819449803655 15.1819449803655 15.1819449803655 0 2.672167511924052 0.8239087409443188 1.5994850021680094 1.339136830878453 {I|L}NEA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}RW{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}EAQDRG{M(Oxidation (M))|F}{I|L}QS;{I|L}N{M(Oxidation (M))|F}SAD[QT][PG]{I|L}QS;{I|L}N{M(Oxidation (M))|F}[WQ]RW{I|L}QS;{I|L}NHEGYY[PG]{I|L}QS;{I|L}N{M(Oxidation (M))|F}SAG{[WT]|[RM]}[PG]{I|L}QS;{I|L}N{M(Oxidation (M))|F}SW[QT][PG]{I|L}QS;[Q{I|L}]DAQDRG{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}EAQD[VG]G{M(Oxidation (M))|F}{I|L}QS;{I|L}N{M(Oxidation (M))|F}SQ{[WT]|[RM]}[PG]{I|L}QS 6.3591;5.2563;5.2376;5.0838;5.0489;5.0014;4.8293;4.6856;4.5954;4.593 -;-;-;-;-;-;-;-;-;- 3889 + 1 1.421 81672.8 1.0 3763 5235 8984 HBL1_DMSO_200M_050219_1,9000 HBL1_DMSO_200M_050219_1,9000,INENRQFEQIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9002 47.27 3.4 9533100.0 25 0 990090.0 + 24961 MPPPPPQGV 9 55 460.2385793050109 918.462605676822 2 460.2390624880791 MULTI CID FTMS 0 0 0 9001 13129260.0 0.4361386591179311 13 -1.0725440979003906 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 3 P[{M(Oxidation (M))|F}T]GV 5 6 23.5 0.0 0.0 2.5586 0.0 0.0 399.2103022731744 0.0 399.2103022731744 0.0 9.06295947543775 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 P[{M(Oxidation (M))|F}T]GV 2.5586 - 88 + 1 1.429 31053.3 1.0 3764 5236 9001 HBL1_DMSO_200M_050219_1,9002 HBL1_DMSO_200M_050219_1,9002,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9003 47.272 5.9 6312400.0 25 0 740820.0 + 41043 VMINKATPY 9 64 518.7780644346672 1035.5415759361342 2 518.7786132693291 MULTI CID FTMS 0 0 0 9001 7566759.5 0.6510419238896014 2 -0.1423759460449218 2 Unmodified _VMINKATPY_ ENSG00000170906|ENST00000485876|NDUFA3 21.53697664764585 0.2571576504437394 3 {[ET]|[MV]}{I|L}N[KA]T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 0 + 31.188 0.0 0.0 3.0118 3.0118 73.782 0.0 0.0 0.0 18.51219677964764 3.736352082229789 3.736352082229789 4.343246711440187 0 0.805462187404089 0.0 0.0 0.0 + + {[ET]|[MV]}{I|L}N[KA]T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}TA{I|L}MV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ET]|[MV]}{I|L}GG[KA]T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}[{I|L}A]TMV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}{[CP]|[EA]}[H{I|L}]{I|L}[DP];{[QN]|[E{I|L}]|[KN]}[{I|L}A]{[YC]|[HE]}{I|L}[DP] 3.0118;2.5924;2.1226;1.7516;0.33017;0.33017 +;-;-;-;-;- + 116 + 1 1.429 34635.0 1.0 3765 5236 9001 HBL1_DMSO_200M_050219_1,9003 HBL1_DMSO_200M_050219_1,9003,VMINKATPY False True VMINKATPY 47.271539 518.778613269329 152822336.0 9001.0 ENSG00000170906|ENST00000485876|NDUFA3 4.756055196126302 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9004 47.273 11.0 4049600.0 25 0 393650.0 + 41179 VPDQPHPEI 9 54 516.2614406525612 1030.5083283719223 2 516.2618286013603 MULTI CID FTMS 0 0 0 9001 4688172.5 0.7693445369932306 -1 0.1331367492675781 3 Unmodified _VPDQPHPEI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 38.17557092003332 0.0854718145212029 3 VPDQPH 6 3 56.322 0.0 0.0 5.4655 0.0 0.0 0.0 354.1673653956826 354.1673653956826 21.12826806974688 0.0 0.0 0.0 0 0.8252574989159953 1.5228787452803376 0.0 0.4247425010840047 + VPDQPH 5.4655 + + 168 + 1 1.429 41893.7 1.0 3766 5236 9001 HBL1_DMSO_200M_050219_1,9004 HBL1_DMSO_200M_050219_1,9004,VPDQPHPEI True True VPDQPHPEI 47.272718 516.26182860136 291503104.0 9001.0 nc|ENSG00000137265|Q15306-2|IRF4;;ENSG00000137265|ENST00000380956|IRF4;;chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;;ENST00000495137.5_1_6:394829-397293:+|nuORF 7.522202968597412 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9005 47.274 14.0 3708500.0 25 0 772550.0 + + 1319 LEGGISPDLVLER 13 61 350.7213210693739 699.4280892055478 2 350.7210876345634 MULTI CID FTMS 0 0 0 9001 4481822.5 0.6567019217131075 1 -0.075653076171875 4 Unmodified _AIVVGGKG_ ENSG00000158292|ENST00000377893|GPR153 19.438996006549623 0.6237395211498085 3 A{I|L}V{I|L}ER 6 -1 + 73.977 0.0 0.0 10.577 10.577 83.543 0.0 0.0 0.0 56.48616209650271 15.48963451112506 15.48963451112506 0.3123468415207497 0 0.4247425010840047 2.0 0.3807196863200844 0.3807196863200844 A{I|L}V{I|L}ER;A{I|L}{I|L}EVR;A{I|L}{I|L}VER 10.577;10.532;9.6021 -;-;- 70 + 1 1.429 48179.8 1.0 3767 5236 9001 HBL1_DMSO_200M_050219_1,9005 HBL1_DMSO_200M_050219_1,9005,AIVVGGKG False False LEGGISPDLVLER 47.273897 350.721087634563 498171.53125 9001.0 ENSG00000158292|ENST00000377893|GPR153 0.0017515470584233 4.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9006 47.275 18.0 2752200.0 25 0 691810.0 + + 19798 KPDGQKLIL 9 73 337.87810075397203 1010.6124728621162 3 337.8778259158134 MULTI CID FTMS 0 0 0 9001 2820653.75 0.3500710311937181 -2 0.1392631530761718 5 Unmodified _LGSLWLPLL_ nc|ENSG00000189308|Q6MZP7-2|LIN54;ENSG00000189308|ENST00000340417|LIN54;nc|ENSG00000189308|Q6MZP7-5|LIN54 34.10243960390752 0.1078313939113124 3 [DP]K{[QG]|[NA]}K{I|L}{I|L}{I|L} 9 -1 + 59.389 0.0 0.0 5.8766 5.8766 90.907 0.0 0.0 0.0 22.592503013052934 31.942059438411903 22.592503013052934 29.20818753952375 0 0.75 1.6989700043360187 0.3807196863200844 0.0 [DP]K{[QG]|[NA]}K{I|L}{I|L}{I|L};[PS][VG]{[QG]|[NA]}K{I|L}{I|L}{I|L} 5.8766;2.9864 -;- 60 1 1.429 47896.4 1.0 3768 5236 9001 HBL1_DMSO_200M_050219_1,9006 HBL1_DMSO_200M_050219_1,9006,LGSLWLPLL False False KPDGQKLIL 47.275074 337.877825915813 88478128.0 9001.0 nc|ENSG00000189308|Q6MZP7-2|LIN54;;ENSG00000189308|ENST00000340417|LIN54;;nc|ENSG00000189308|Q6MZP7-5|LIN54 1.033296267191569 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9007 47.276 43.0 1095500.0 25 0 157380.0 + 12123 GQISDRPSL 9 75 486.7586945050697 971.5028360769394 2 486.7594787478447 MULTI CID FTMS 0 0 0 9001 1180963.125 0.4934828766854967 -1 0.1331367492675781 6 Unmodified _GQISDRPSL_ ENSG00000239961|ENST00000291759|LILRA4;nc|ENSG00000239961|P59901-2|LILRA4 19.361941925380144 0.3125782356748823 3 {[QG]|[NA]}{I|L}SDR[TP]V 9 2 + 46.098 0.0 0.0 4.745 4.745 72.937 0.0 0.0 0.0 15.106442888633254 0.8715017571890016 0.8715017571890016 0.8715017571890016 0 0.8807196863200843 0.7958800173440752 0.0 0.0 {[QG]|[NA]}{I|L}SDR[TP]V;{[QG]|[NA]}{I|L}SDR[PS]{I|L};{[QG]|[NA]}{I|L}SD[VG][TP]V;{[QG]|[NA]}{I|L}SD[VG][PS]{I|L};{[QG]|[NA]}{I|L}{I|L}[MN][TP]V;{[QG]|[NA]}{I|L}{I|L}[MN][PS]{I|L};{[QG]|[NA]}{I|L}[VP][WC(Carbamidomethyl (C))]{I|L} 4.745;4.6553;3.7971;3.7074;2.8149;2.7252;1.4984 -;+;-;-;-;-;- + 93 + 1 1.429 41906.2 1.0 3769 5236 9001 HBL1_DMSO_200M_050219_1,9007 HBL1_DMSO_200M_050219_1,9007,GQISDRPSL False True GQISDRPSL 47.276274 486.759478747845 11054107.0 9001.0 nc|ENSG00000239961|P59901-2|LILRA4;;ENSG00000239961|ENST00000291759|LILRA4 6.433718045552571 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9008 47.277 37.0 1086200.0 25 0 95002.0 + 21234 LPDKGQKLI 9 69 506.3139596467041 1010.6133663602084 2 506.3143798708916 MULTI CID FTMS 0 0 0 9001 1055758.875 0.3777293353692204 -2 0.1392631530761718 7 Unmodified _LPDKGQKLI_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 49.55428908609986 0.0413471690215031 3 {I|L}PDK 4 5 48.307 0.0 0.0 4.78 0.0 0.0 0.0 554.3305147760374 554.3305147760374 28.84311564696993 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.4247425010840047 0.0 + {I|L}PDK 4.78 + + 80 + 1 1.429 40259.7 1.0 3770 5236 9001 HBL1_DMSO_200M_050219_1,9008 HBL1_DMSO_200M_050219_1,9008,LPDKGQKLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9009 47.28 95.0 600750.0 25 0 79372.0 37532 TLHPVWSQQ 9 88 548.282644248066 1094.550735562932 2 548.2830688357353 MULTI CID FTMS 0 0 0 9001 928062.75 0.530843770028631 2 -0.1423759460449218 8 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 14.95716135407024 0.4318104563536712 3 HEPPH[VP] 7 8 43.298 0.0 0.0 3.9558 0.0 0.0 283.153123924025 0.0 283.153123924025 0.0 21.6827142266111 0.0 0.0 0 1.8807196863200843 0.0 0.0 0.0 HEPPH[VP] 3.9558 - 354 1 1.429 49675.4 1.0 3771 5236 9001 HBL1_DMSO_200M_050219_1,9009 HBL1_DMSO_200M_050219_1,9009,TLHPVWSQQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9010 47.282 104.0 367570.0 25 0 68549.0 + -1 YQNYQEEMCA 10 74 676.2493798679646 1350.4842068027292 2 676.2508422732353 MULTI CID FTMS 0 0 0 9001 803570.4375 0.2959330132307473 1 -0.075653076171875 9 Carbamidomethyl (C),Oxidation (M) _YQNYQEEM(Oxidation (M))C(Carbamidomethyl (C))A_ REV__ENSG00000145194|ENST00000404464|ECE2;REV__ENST00000488401.5_1_3:183993962-184009147:+|nuORF;REV__nc|ENSG00000145194|P0DPD6-3|ECE2;REV__nc|ENSG00000145194|P0DPD6|ECE2;REV__nc|ENSG00000284917|P0DPD8|EEF1AKMT4-ECE2 3.944395688203298 0.708391353636983 3 [YQ]{I|L}S 4 -1 24.882 0.0 0.0 1.8425 0.0 0.0 0.0 856.2232564455604 856.2232564455604 11.783343794609138 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.4247425010840047 [YQ]{I|L}S 1.8425 - 55 1 1.429 33989.6 1.0 3772 5236 9001 HBL1_DMSO_200M_050219_1,9010 HBL1_DMSO_200M_050219_1,9010,YQNYQEEMCA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9011 47.284 93.0 420900.0 25 0 25285.0 + 2115 APTPAQAQI 9 87 448.7454198362124 895.4762867392247 2 448.7452270388603 MULTI CID FTMS 0 0 0 9001 605434.5625 0.4937679021679304 1 -0.075653076171875 10 Unmodified _APTPAQAQI_ ENSG00000165417|ENST00000553612|GTF2A1;ENST00000298173.7_1_14:81646569-81676264:-|nuORF;nc|ENSG00000165417|P52655-2|GTF2A1 26.88365393820708 0.1891292719743517 3 [AG]A[TP]PA 7 6 15.993 0.0 0.0 1.786 0.0 0.0 0.0 327.1690717336185 327.1690717336185 2.4983521970237987 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.7887254899964358 0.0 [AG]A[TP]PA 1.786 - 123 1 1.429 39594.1 1.0 3773 5236 9001 HBL1_DMSO_200M_050219_1,9011 HBL1_DMSO_200M_050219_1,9011,APTPAQAQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9012 47.286 88.0 473920.0 25 0 41004.0 + 3602 DAARAIAGV 9 73 422.23784738706456 842.4611418409291 2 422.2377502322197 MULTI CID FTMS 0 0 0 9001 526094.3125 0.2465942636801299 -2 0.1392631530761718 11 Unmodified _DAARAIAGV_ ENSG00000130811|ENST00000253108|EIF3G;ENST00000590158.1_1_19:10225792-10226817:-|nuORF 36.506200033944 0.094635877243972 3 {[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}AGV 9 0 + 54.096 0.0 0.0 6.4211 6.4211 87.602 0.0 0.0 0.0 8.200523801503472 10.72559982972642 8.200523801503472 8.200523801503472 0 1.805462187404089 1.3979400086720375 0.0 0.0 + + {[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}AGV;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L}AGV;{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}QV;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L}QV;[AG]{[RE]|[WV]}A{I|L}AGV;{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}[RV]GV;[AG]{[RE]|[WV]}A{I|L}QV;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RV]GV 6.4211;5.4477;5.416;4.4426;3.5952;3.5476;2.5901;2.5742 +;-;-;-;-;-;-;- + 93 1 1.429 37678.0 1.0 3774 5236 9001 HBL1_DMSO_200M_050219_1,9012 HBL1_DMSO_200M_050219_1,9012,DAARAIAGV True True DAARAIAGV 47.285758 422.23775023222 15813450.0 9001.0 ENST00000590158.1_1_19:10225792-10226817:-|nuORF;;ENSG00000130811|ENST00000253108|EIF3G 5.625822067260742 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9013 47.289 144.0 375300.0 25 0 22019.0 -1 WDTWTCVL 8 99 540.7438899765426 1079.4732270198851 2 540.7434570193291 MULTI CID FTMS 0 0 0 9001 514996.90625 0.5538510455715276 -1 0.1331367492675781 12 Carbamidomethyl (C) _WDTWTC(Carbamidomethyl (C))VL_ ENSG00000214595|ENST00000356458|EML6;nc|ENSG00000214595|Q6ZMW3-2|EML6 18.13498045792455 0.6430038125133779 3 {[DA]|[EG]}[PG][YC(Carbamidomethyl (C))]WV{I|L} 9 -1 + 53.987 0.0 0.0 5.0012 5.0012 74.39 0.0 0.0 0.0 8.349621957594096 8.349621957594096 8.349621957594096 1.249387366082999 0 1.2614393726401687 2.0 0.0 0.0 {[DA]|[EG]}[PG][YC(Carbamidomethyl (C))]WV{I|L};{[DA]|[EG]}[PG]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]VV{I|L};{[DA]|[EG]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[C(Carbamidomethyl (C))M]VV{I|L};{[DA]|[EG]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[CT]|[{M(Oxidation (M))|F}G]}WV{I|L};{[DA]|[EG]}D[HT][Y{M(Oxidation (M))|F}]V{I|L};{[DA]|[EG]}[PG][YC(Carbamidomethyl (C))]VW{I|L};{[DA]|[EG]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[CT]|[{M(Oxidation (M))|F}G]}VW{I|L};{[DA]|[EG]}DQQ[YE]V{I|L};{[DA]|[EG]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[R{M(Oxidation (M))|F}]W{I|L};{[SA]|[TG]}[WD][C(Carbamidomethyl (C))M]VV{I|L} 5.0012;4.8855;4.4435;4.4435;4.2278;4.0961;3.5383;3.4449;2.9382;2.8933 -;-;-;-;-;-;-;-;-;- 177 1 1.429 47685.4 1.0 3775 5236 9001 HBL1_DMSO_200M_050219_1,9013 HBL1_DMSO_200M_050219_1,9013,WDTWTCVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9014 47.292 195.0 235550.0 25 0 36625.0 + 37417 TLCARPETV 9 89 495.2564672204266 988.4983815076532 2 495.2566711306572 MULTI CID FTMS 0 0 0 9001 274581.625 0.020657721234662 10 -0.8029136657714844 13 Unmodified _TLCARPETV_ REV__ENSG00000115317|ENST00000258080|HTRA2;REV__ENST00000484352.5_1_2:74757313-74758690:+|nuORF;REV__nc|ENSG00000115317|O43464-2|HTRA2;REV__nc|ENSG00000115317|O43464-3|HTRA2;REV__nc|ENSG00000115317|O43464-4|HTRA2 12.531546534597751 0.4974689918368763 3 [{I|L}T]{M(Oxidation (M))|F} 3 -1 16.26 0.0 0.0 1.6449 0.0 0.0 0.0 624.3078962383751 624.3078962383751 2.459537260849705 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2614393726401688 0.0 [{I|L}T]{M(Oxidation (M))|F} 1.6449 - 55 1 1.429 42102.8 1.0 3776 5236 9001 HBL1_DMSO_200M_050219_1,9014 HBL1_DMSO_200M_050219_1,9014,TLCARPETV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9015 47.302 551.0 162550.0 25 0 6729.2 + 45552 YVDDTPAEQM 10 133 584.7450494883872 1167.4755460435742 2 584.7452880740166 MULTI CID FTMS 0 0 0 9001 274233.84375 0.4850520975317264 -1 0.1331367492675781 14 Unmodified _YVDDTPAEQM_ ENSG00000136628|ENST00000366923|EPRS1 60.07390631473393 0.0363923079357811 3 [YV]DDT[PA]EQM 10 0 + 47.979 0.0 0.0 4.1096 4.1096 80.929 0.0 0.0 0.0 12.74227503252014 12.74227503252014 12.74227503252014 9.164539485499256 0 0.6382104921644451 1.6989700043360187 0.805462187404089 0.0 + + [YV]DDT[PA]EQM;[YV]DDT[PA]E[AG]M;[YN]E[PA]TDD{I|L}M;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[PA]EQM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ESV[VS]EQM;[PA]EYD[VS]EQM;[PA]EYN[C(Carbamidomethyl (C))R]QM;{[CP]|[EA]}EYT[PA]EQM;[PA]EDY[VS]EQM;[PA]Y{[{M(Oxidation (M))|F}D]|MM}[PA]EQM 4.1096;3.3246;3.0182;2.7047;2.632;2.6045;2.3892;2.3392;2.2893;2.2259 +;-;-;-;-;-;-;-;-;- + 916 1 1.429 70914.0 1.0 3777 5236 9001 HBL1_DMSO_200M_050219_1,9015 HBL1_DMSO_200M_050219_1,9015,YVDDTPAEQM True True YVDDTPAEQM 47.302068 584.745288074017 2721535.0 9001.0 ENSG00000136628|ENST00000366923|EPRS1 8.244953473409018 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9016 47.312 584.0 481880.0 25 0 41045.0 + 41994 VQPEGPYRV 9 218 522.7774661306969 0 522.7776367068291 PEAK CID FTMS 0 0 0 9001 247157.09375 0.3843772492601893 -1 0.1331367492675781 15 Unmodified _VQPEGPYRV_ ENSG00000169710|ENST00000306749|FASN 58.6788170122104 0.0182512554486535 3 KPEG 4 6 29.112 0.0 0.0 2.7898 0.0 0.0 99.0238024372082 530.2750948541624 629.2988972913706 0.0 0.0 0.0 0.0 0 0.5 0.0 0.566901560044258 0.0 KPEG 2.7898 - 1021 + 1 1.429 233900.7 1.0 3778 5236 9001 HBL1_DMSO_200M_050219_1,9016 HBL1_DMSO_200M_050219_1,9016,VQPEGPYRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9017 47.326 796.0 462920.0 25 0 46194.0 -1 0 294 366.2281753927718 730.4417978523436 2 366.2286254763603 MULTI CID FTMS 0 0 0 9001 238206.546875 1.0 0 0.0 16 3 [{I|L}P]TTK 5 -1 17.479 0.0 0.0 2.3929 0.0 0.0 0.0 187.091475851352 187.091475851352 2.9976119780222525 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 [{I|L}P]TTK 2.3929 - 218 1 1.429 281922.5 1.0 3779 5236 9001 HBL1_DMSO_200M_050219_1,9017 HBL1_DMSO_200M_050219_1,9017, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9018 47.33 207.0 407190.0 25 0 28954.0 -1 0 87 1037.974445800579 2073.934338667958 2 1037.974902331829 MULTI CID FTMS 0 0 0 9001 213631.609375 0.2674979991095675 -3 0.216522216796875 17 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{M(Oxidation (M))|F}[YQ]SRS{I|L}DG{M(Oxidation (M))|F}S 14 -1 67.481 0.0 0.0 3.2538 0.0 0.0 0.0 420.170153447508 420.170153447508 37.86715832719828 0.0 0.0 0.0 0 0.5 1.2218487496163564 1.1861818737241734 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{M(Oxidation (M))|F}[YQ]SRS{I|L}DG{M(Oxidation (M))|F}S 3.2538 - 5300 1 1.429 62884.1 1.0 3780 5236 9001 HBL1_DMSO_200M_050219_1,9018 HBL1_DMSO_200M_050219_1,9018, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9019 47.332 79.0 1606000.0 25 0 174780.0 + 28294 PRPWHWHWRRR 11 121 557.301652081327 1668.8831268441809 3 557.3021118044853 MULTI CID FTMS 0 0 0 9001 218358.53125 0.0428107184851851 -3 0.216522216796875 18 Unmodified _PRPWHWHWRRR_ REV__ENST00000321582.9_1_9:124855435-124855555:-|nuORF 0.4545168274142398 0.8730034954726786 3 [{I|L}V]Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K 15 -1 + 129.62 0.0 0.0 7.7671 7.7671 64.023 0.0 0.0 0.0 95.65232523756036 17.19171643595179 17.19171643595179 0.0 0 0.6549471895720985 2.0 1.079689690656103 0.6694451763165201 [{I|L}V]Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V]K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V][AG]{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]Q{M(Oxidation (M))|F}SDG{I|L}AHR{[DA]|[EG]}{I|L}K;[{I|L}V][AG]{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V]Q{M(Oxidation (M))|F}SD[Q{I|L}]H{I|L}DN{I|L}K;[{I|L}V]K{M(Oxidation (M))|F}SD[Q{I|L}]H{I|L}DN{I|L}K;[{I|L}V]Q{M(Oxidation (M))|F}S{[RE]|[WV]}AH{I|L}DN{I|L}K 7.7671;7.7671;7.226;7.226;7.226;6.7024;6.6859;6.4231;6.4231;6.2401 -;-;-;-;-;-;-;-;-;- 5580 + 1 1.429 103410.6 1.0 3781 5236 9001 HBL1_DMSO_200M_050219_1,9019 HBL1_DMSO_200M_050219_1,9019,PRPWHWHWRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9020 47.337 221.0 423560.0 25 0 31778.0 + 12503 GVDPNQYTKV 10 131 560.7856226938644 1119.5566924545287 2 560.7861205935478 MULTI CID FTMS 0 0 0 9001 190891.875 0.728817830262022 2 -0.1423759460449218 19 Unmodified _GVDPNQYTKV_ ENSG00000087206|ENST00000511320|UIMC1;nc|ENSG00000087206|Q96RL1-3|UIMC1 21.59015148037692 0.4836074274810599 3 [VG]D[KA]{M(Oxidation (M))|F}{[CP]|[EA]}H{M(Oxidation (M))|F} 10 7 + 47.017 0.0 0.0 4.1996 4.1996 79.349 0.0 0.0 0.0 22.214380121271 3.1437180047066 3.1437180047066 6.879746200345565 0 0.6382104921644451 2.0 0.0 0.0 [VG]D[KA]{M(Oxidation (M))|F}{[CP]|[EA]}H{M(Oxidation (M))|F};[VG]D[KA]{M(Oxidation (M))|F}Y[HS]P;[VG]D[NP]QYTKV;[VG][WK]{M(Oxidation (M))|F}{[CP]|[EA]}H{M(Oxidation (M))|F};[VG]D{I|L}[HK][PA]H{M(Oxidation (M))|F};[VG]D[C(Carbamidomethyl (C))K][DV]TKV;[VG][WK]{M(Oxidation (M))|F}Y[HS]P;[VG]D[NP][AG]YTKV;[VG]YYQYTKV;[VG]D{I|L}[HK][HA]P{M(Oxidation (M))|F} 4.1996;3.5851;3.4008;3.3583;3.3473;3.0186;2.7438;2.5822;2.5594;2.4949 -;-;+;-;-;-;-;-;-;- + 995 + 1 1.429 79302.7 1.0 3782 5236 9001 HBL1_DMSO_200M_050219_1,9020 HBL1_DMSO_200M_050219_1,9020,GVDPNQYTKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9021 47.342 244.0 500040.0 25 0 39460.0 + 3066 AVLRGIQKV 9 168 492.3214383578325 982.628323782465 2 492.3216735720634 MULTI CID FTMS 0 0 0 9001 172306.578125 0.8491840953164131 -1 0.1331367492675781 20 Unmodified _AVLRGIQKV_ ENSG00000058600|ENST00000299853|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;ENST00000569787.1_1_16:22328322-22336592:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E 26.88365393820708 0.1891292719743517 3 {[VA]|[{I|L}G]}[R{I|L}]G{I|L}Q 7 2 21.444 0.0 0.0 2.1823 0.0 0.0 0.0 242.1516462869927 242.1516462869927 7.85701535697749 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {[VA]|[{I|L}G]}[R{I|L}]G{I|L}Q 2.1823 + + 785 1 1.429 97339.4 1.0 3783 5236 9001 HBL1_DMSO_200M_050219_1,9021 HBL1_DMSO_200M_050219_1,9021,AVLRGIQKV False True AVLRGIQKV 47.34172 492.321673572063 1296384.625 9001.0 nc|ENSG00000058600|Q9NVU0-3|POLR3E;;ENSG00000058600|ENST00000299853|POLR3E;;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;;ENST00000569787.1_1_16:22328322-22336592:+|nuORF;;nc|ENSG00000058600|Q9NVU0-5|POLR3E;;nc|ENSG00000058600|Q9NVU0-4|POLR3E;;nc|ENSG00000058600|Q9NVU0-2|POLR3E 2.924439549446106 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9023 47.346 20.0 2229400.0 25 0 145150.0 + 4239 DAPMTPKQI 9 82 500.75994000410094 999.505327075002 2 500.7603027224541 MULTI CID FTMS 0 0 0 9022 1784030.5 0.0919067733000551 5 -0.437591552734375 1 Unmodified _DAPMTPKQI_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1 27.628801355627647 0.1796483985696185 3 {[DA]|[EG]}PMTPKQ{I|L} 9 0 + 45.47 0.0 0.0 4.5493 4.5493 84.475 0.0 0.0 0.0 24.09496246582925 10.627788096088024 10.627788096088024 12.26280941356464 0 0.4876954943324545 2.0 0.0 0.3054621874040891 + + {[DA]|[EG]}PMTPKQ{I|L};{[DA]|[EG]}PMTPK[AG]{I|L} 4.5493;3.3224 +;- + 287 + 1 1.429 39297.3 1.0 3784 5237 9022 HBL1_DMSO_200M_050219_1,9023 HBL1_DMSO_200M_050219_1,9023,DAPMTPKQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9024 47.347 18.0 3816700.0 25 0 420810.0 + 43221 WAPIRDGASI 10 77 362.529520375864 1084.566731727792 3 362.5292846560478 MULTI CID FTMS 0 0 0 9022 2972697.75 0.5260202100419559 9 -0.7272605895996094 2 Unmodified _WAPIRDGASI_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 22.736283301280096 0.4578556481593033 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 5 -1 46.739 0.0 0.0 4.3095 0.0 0.0 0.0 485.24764258889286 485.24764258889286 33.78022170376731 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.805462187404089 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 4.3095 - 74 + 1 1.429 66412.1 1.0 3785 5237 9022 HBL1_DMSO_200M_050219_1,9024 HBL1_DMSO_200M_050219_1,9024,WAPIRDGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9025 47.348 15.0 2840200.0 25 0 283520.0 -1 YPVFCVQT 8 73 507.2436996092747 0 507.2435485720634 PEAK CID FTMS 0 0 0 9022 2301881.0 0.5397306365727443 -1 0.075653076171875 3 Carbamidomethyl (C) _YPVFC(Carbamidomethyl (C))VQT_ ENSG00000125788|ENST00000382398|DEFB126 15.847184025352805 0.4758297917908462 3 PV{M(Oxidation (M))|F}HHP 6 -1 22.664 0.0 0.0 2.2385 0.0 0.0 163.06349878526208 132.0457705133422 295.1092692986043 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PV{M(Oxidation (M))|F}HHP 2.2385 - 96 + 1 1.429 41137.3 1.0 3786 5237 9022 HBL1_DMSO_200M_050219_1,9025 HBL1_DMSO_200M_050219_1,9025,YPVFCVQT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9026 47.35 18.0 2402700.0 25 0 264920.0 + 2183 AQAPDLQRV 9 75 499.274774576537 996.534996219874 2 499.2753173708916 MULTI CID FTMS 0 0 0 9022 2132879.25 0.0281995704696524 13 -1.0890769958496094 4 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 26.268140514670165 0.1969607489560049 3 [QA]APD{I|L} 6 3 45.772 0.0 0.0 4.5931 0.0 0.0 0.0 398.2189119928344 398.2189119928344 32.74041071534373 0.0 0.0 0.0 0 1.0 0.8860566476931632 0.0 0.0 + [QA]APD{I|L} 4.5931 + + 76 + 1 1.429 40918.9 1.0 3787 5237 9022 HBL1_DMSO_200M_050219_1,9026 HBL1_DMSO_200M_050219_1,9026,AQAPDLQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9027 47.351 27.0 1827600.0 25 0 131230.0 + 24379 MFLSFPTTK 9 81 544.2769779598865 1086.539402986573 2 544.2775756716728 MULTI CID FTMS 0 0 0 9022 1214901.125 1.0 0 0.0 5 Oxidation (M) _M(Oxidation (M))FLSFPTTK_ CON__P01966;ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;ENST00000487791.1_1_16:226802-227261:+|nuORF 41.95555342248728 0.0647214845423414 3 {M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F}[TP]TK 9 0 + 76.425 0.0 0.0 7.0338 7.0338 94.717 0.0 0.0 0.0 62.88540967689293 11.74410632329284 11.74410632329284 37.53083433768431 0 0.8494850021680094 2.0 1.079689690656103 0.1549471895720985 + + {M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F}[TP]TK;{M(Oxidation (M))|F}{M(Oxidation (M))|F}[RN]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TK;EE[HV]{M(Oxidation (M))|F}[TP]TK 7.0338;3.5796;1.6771 +;-;- + 86 + 1 1.429 42711.3 1.0 3788 5237 9022 HBL1_DMSO_200M_050219_1,9027 HBL1_DMSO_200M_050219_1,9027,MFLSFPTTK True False MFLSFPTTK 47.350724 544.277575671673 60994492.0 9022.0 P01966;;ENSG00000206172|ENST00000320868|HBA1;;ENST00000487791.1_1_16:226802-227261:+|nuORF;;ENSG00000188536|ENST00000251595|HBA2 11.436400731404625 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 9028 47.352 56.0 1002300.0 25 0 103100.0 + 4390 DAVNVQKI 8 98 443.75343375048135 885.4923145677627 2 443.7534362673759 MULTI CID FTMS 0 0 0 9022 983800.0 0.9308408566564926 1 -0.0667228698730468 6 Unmodified _DAVNVQKI_ ENSG00000047315|ENST00000314595|POLR2B 54.773552608820026 0.1167943196628344 3 {[DA]|[EG]}VNVQK{I|L} 8 0 + 81.169 0.0 0.0 9.1665 9.1665 95.17 0.0 0.0 0.0 65.99128313749111 12.5190243216651 12.5190243216651 9.262137858390815 0 1.0941876774005248 2.0 0.0 0.6861818737241735 + + {[DA]|[EG]}VNVQK{I|L};{[DA]|[EG]}VNV[AG]K{I|L};{[DA]|[EG]}VGGVQK{I|L};{[DA]|[EG]}VGGV[AG]K{I|L};{[DA]|[EG]}[KQ][PS]K{I|L} 9.1665;8.1205;8.1205;7.0806;3.8368 +;-;-;-;- + 203 + 1 1.429 47146.2 1.0 3789 5237 9022 HBL1_DMSO_200M_050219_1,9028 HBL1_DMSO_200M_050219_1,9028,DAVNVQKI True True DAVNVQKI 47.352141 443.753436267376 7736607.0 9022.0 ENSG00000047315|ENST00000314595|POLR2B 6.057688554128011 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9029 47.353 32.0 1929500.0 25 0 232470.0 + 977 AFQHVGKAF 9 90 335.5151650697843 1003.523665809553 3 335.5152160525322 MULTI CID FTMS 0 0 0 9022 919331.125 0.8946955162058623 -1 0.075653076171875 7 Unmodified _AFQHVGKAF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 20.41453444215458 0.284085796332423 3 HV[KG]A{M(Oxidation (M))|F} 6 3 24.385 0.0 0.0 2.43 0.0 0.0 346.1638721246413 0.0 346.1638721246413 0.0 19.781381439366186 0.0 0.0 0 0.5 0.0 0.0 0.0 + HV[KG]A{M(Oxidation (M))|F} 2.43 + + 99 + 1 1.429 54583.0 1.0 3790 5237 9022 HBL1_DMSO_200M_050219_1,9029 HBL1_DMSO_200M_050219_1,9029,AFQHVGKAF False True AFQHVGKAF 47.353318 335.515216052532 4888782.5 9022.0 ENSG00000254772|ENST00000329251|EEF1G;;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;;nc|ENSG00000254772|P26641-2|EEF1G 6.555339495340983 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9030 47.356 123.0 704070.0 25 0 61779.0 + 18391 KVSSGFSGV 9 111 434.2319236867223 866.4492944402446 2 434.2318298220634 MULTI CID FTMS 0 0 0 9022 810047.375 0.6300940195031863 3 -0.2886161804199219 8 Unmodified _KVSSGFSGV_ ENSG00000137193|ENST00000373509|PIM1;nc|ENSG00000137193|P11309-2|PIM1 27.628801355627647 0.1796483985696185 3 [VG]S[KS]{M(Oxidation (M))|F}SGV 9 2 [VG]S[KS]{M(Oxidation (M))|F} + + 32.664 6.9011 1.1401 3.7698 3.7698 51.924 0.0 0.0 0.0 0.0 21.404740224918548 0.0 0.0 0 1.0 0.0 0.2742275032520141 0.0 [VG]S[KS]{M(Oxidation (M))|F}SGV 3.7698 - 185 + 1 1.429 74407.0 1.0 3791 5237 9022 HBL1_DMSO_200M_050219_1,9030 HBL1_DMSO_200M_050219_1,9030,KVSSGFSGV False True KVSSGFSGV 47.355851 434.231829822063 8731345.0 9022.0 nc|ENSG00000137193|P11309-2|PIM1;;ENSG00000137193|ENST00000373509|PIM1 2.007751782735189 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9031 47.358 76.0 507610.0 25 0 31958.0 + 16354 IYNEVNQTY 9 72 572.2693338416902 1142.5241147501804 2 572.2693359255791 MULTI CID FTMS 0 0 0 9022 629011.3125 0.5612882381889545 3 -0.2886161804199219 9 Unmodified _IYNEVNQTY_ ENSG00000169371|ENST00000308588|SNUPN 19.256988751693697 0.3154191944385105 3 [Y{I|L}]NE 4 5 24.437 0.0 0.0 2.1389 0.0 0.0 0.0 620.2689627328554 620.2689627328554 8.863781092484686 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [Y{I|L}]NE 2.1389 + + 104 1 1.429 35927.4 1.0 3792 5237 9022 HBL1_DMSO_200M_050219_1,9031 HBL1_DMSO_200M_050219_1,9031,IYNEVNQTY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9032 47.359 60.0 1499100.0 25 0 164680.0 -1 0 121 600.0000341176942 1796.9782729532826 3 600.3350707888603 MULTI CID FTMS 0 0 0 9022 635769.9375 0.4559032328674589 -2 0.2087898254394531 10 3 [{I|L}V]KQ{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K 16 -1 + 128.28 0.0 0.0 7.1389 7.1389 62.411 0.0 0.0 0.0 109.84070849837984 17.365393123947115 17.365393123947115 0.0 0 2.649649864804614 2.0 0.805462187404089 0.8252574989159953 [{I|L}V]KQ{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]QK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]KK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]K[AG]{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]KK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V]QK{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V]KQ{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V][AG]K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]QK{M(Oxidation (M))|F}S{[RE]|[WV]}AH{I|L}DN{I|L}K;[{I|L}V]KQ{M(Oxidation (M))|F}S{[RE]|[WV]}AH{I|L}DN{I|L}K 7.1389;7.1389;7.1389;6.6373;6.6373;6.6373;6.6373;6.6373;6.4319;6.4319 -;-;-;-;-;-;-;-;-;- 8931 + 1 1.429 73185.3 1.0 3793 5237 9022 HBL1_DMSO_200M_050219_1,9032 HBL1_DMSO_200M_050219_1,9032, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9033 47.361 105.0 690110.0 25 0 66653.0 + 19305 LELAGAAGS 9 101 394.71120634393327 787.4078597546666 2 394.7108642458916 MULTI CID FTMS 0 0 0 9022 509715.5 1.0 0 0.0 11 Unmodified _LELAGAAGS_ REV__ENSG00000159140|ENST00000356577|SON;REV__nc|ENSG00000159140|P18583-10|SON;REV__nc|ENSG00000159140|P18583-2|SON;REV__nc|ENSG00000159140|P18583-3|SON;REV__nc|ENSG00000159140|P18583-4|SON;REV__nc|ENSG00000159140|P18583-5|SON;REV__nc|ENSG00000159140|P18583-6|SON;REV__nc|ENSG00000159140|P18583-7|SON;REV__nc|ENSG00000159140|P18583-8|SON;REV__nc|ENSG00000159140|P18583-9|SON 12.531546534597751 0.4974689918368763 3 {[QN]|[E{I|L}]|[KN]}EER{I|L} 6 -1 + 52.725 0.0 0.0 6.6961 6.6961 87.557 0.0 0.0 0.0 24.57203416424356 11.42667503568731 11.42667503568731 6.976020196809252 0 0.0 1.6989700043360187 0.6861818737241735 0.0 {[QN]|[E{I|L}]|[KN]}EER{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}GD{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}GEV;{[QN]|[E{I|L}]|[KN]}E{I|L}WV;{[QN]|[E{I|L}]|[KN]}{I|L}EGD{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}WD{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}EWV;{[QN]|[E{I|L}]|[KN]}{I|L}EGEV;{[QN]|[E{I|L}]|[KN]}{I|L}WEV;{[RE]|[WV]}E{I|L}E{I|L} 6.6961;5.8101;5.0014;4.9494;4.6979;4.1691;4.1691;3.8891;3.3604;1.1889 -;-;-;-;-;-;-;-;-;- 128 + 1 1.429 60661.6 1.0 3794 5237 9022 HBL1_DMSO_200M_050219_1,9033 HBL1_DMSO_200M_050219_1,9033,LELAGAAGS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9034 47.363 64.0 940260.0 25 0 66358.0 + 35594 STVEKLYAA 9 102 491.26634798852285 980.5181430438456 2 491.2666503787041 MULTI CID FTMS 0 0 0 9022 486703.1875 0.4801369545438963 -1 0.075653076171875 12 Unmodified _STVEKLYAA_ ENSG00000104825|ENST00000313582|NFKBIB;ENST00000509705.3_1_19:39390655-39398344:+|nuORF;nc|ENSG00000104825|Q15653-2|NFKBIB 34.40172386719151 0.1061884637610825 3 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}HSVA 8 5 30.13 0.0 0.0 3.0729 0.0 0.0 0.0 114.0128814578101 114.0128814578101 15.82649971209472 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}HSVA 3.0729 - 1206 1 1.429 50282.3 1.0 3795 5237 9022 HBL1_DMSO_200M_050219_1,9034 HBL1_DMSO_200M_050219_1,9034,STVEKLYAA True True STVEKLYAA 47.362886 491.266650378704 3654404.25 9022.0 nc|ENSG00000104825|Q15653-2|NFKBIB;;ENSG00000104825|ENST00000313582|NFKBIB;;ENST00000509705.3_1_19:39390655-39398344:+|nuORF 4.300061941146851 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9035 47.365 105.0 597200.0 25 0 47174.0 + 31912 RTVPEIEKV 9 85 535.8133733762826 1069.612193819365 2 535.8138915896416 MULTI CID FTMS 0 0 0 9022 463801.96875 0.489650463713675 2 -0.1308822631835937 13 Unmodified _RTVPEIEKV_ ENSG00000104884|ENST00000391945|ERCC2;ENST00000586441.1_1_19:45867568-45872241:-|nuORF;nc|ENSG00000104884|P18074-2|ERCC2 14.40537977576856 0.4467465336100671 3 VSPEK{I|L} 6 6 47.331 0.0 0.0 4.425 0.0 0.0 0.0 413.2145784967407 413.2145784967407 29.059640787890544 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 VSPEK{I|L} 4.425 - 57 + 1 1.429 55591.3 1.0 3796 5237 9022 HBL1_DMSO_200M_050219_1,9035 HBL1_DMSO_200M_050219_1,9035,RTVPEIEKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9036 47.367 85.0 611330.0 25 0 60937.0 + 28010 PMPPRTNE 8 78 471.2302739017799 940.4459948703598 2 471.2298461794853 MULTI CID FTMS 0 0 0 9022 492270.34375 0.4176528065681408 21 -1.9462928771972656 14 Unmodified _PMPPRTNE_ REV__ENSG00000101203|ENST00000358894|COL20A1;REV__ENST00000471582.5_1_20:61956720-61961007:+|nuORF;REV__ENST00000479501.5_1_20:61950534-61961007:+|nuORF;REV__nc|ENSG00000101203|Q9P218-2|COL20A1;REV__nc|ENSG00000101203|Q9P218-3|COL20A1 15.847184025352805 0.6768015514314958 3 MPPP 4 -1 55.767 0.0 0.0 5.9299 0.0 0.0 0.0 515.2247408502561 515.2247408502561 44.50827206916173 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 MPPP 5.9299 - 124 + 1 1.429 44094.0 1.0 3797 5237 9022 HBL1_DMSO_200M_050219_1,9036 HBL1_DMSO_200M_050219_1,9036,PMPPRTNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9037 47.369 99.0 1106700.0 25 0 197670.0 + 32527 SALQAQPL 8 106 414.2347030448252 826.4548531564504 2 414.2344543337822 MULTI CID FTMS 0 0 0 9022 383475.0625 0.0584825606168839 5 -0.437591552734375 15 Unmodified _SALQAQPL_ REV__CON__ENSEMBL:ENSBTAP00000001528;REV__ENSG00000205726|ENST00000381318|ITSN1;REV__nc|ENSG00000205726|Q15811-10|ITSN1;REV__nc|ENSG00000205726|Q15811-11|ITSN1;REV__nc|ENSG00000205726|Q15811-12|ITSN1;REV__nc|ENSG00000205726|Q15811-13|ITSN1;REV__nc|ENSG00000205726|Q15811-2|ITSN1;REV__nc|ENSG00000205726|Q15811-3|ITSN1;REV__nc|ENSG00000205726|Q15811-4|ITSN1;REV__nc|ENSG00000205726|Q15811-5|ITSN1;REV__nc|ENSG00000205726|Q15811-6|ITSN1;REV__nc|ENSG00000205726|Q15811-7|ITSN1;REV__nc|ENSG00000205726|Q15811-8|ITSN1;REV__nc|ENSG00000205726|Q15811-9|ITSN1 12.531546534597751 0.7257836412119636 3 [EP]{I|L} 3 -1 27.447 0.0 0.0 3.3211 0.0 0.0 0.0 484.25936300435984 484.25936300435984 14.973024840566469 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [EP]{I|L} 3.3211 - 208 1 1.429 90478.7 1.0 3798 5237 9022 HBL1_DMSO_200M_050219_1,9037 HBL1_DMSO_200M_050219_1,9037,SALQAQPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9038 47.378 479.0 295350.0 25 0 11571.0 -1 IVLVRINQGQM 11 139 643.8649441098997 1285.7153352865994 2 644.3666869997978 MULTI CID FTMS 0 0 0 9022 344564.1875 0.9416331233927048 -1 0.075653076171875 16 Oxidation (M) _IVLVRINQGQM(Oxidation (M))_ ENSG00000078269|ENST00000355585|SYNJ2;ENST00000367112.1_2_6:158500311-158517393:+|nuORF;nc|ENSG00000078269|O15056-2|SYNJ2;nc|ENSG00000078269|O15056-3|SYNJ2 13.90604991867851 0.7458848613461305 3 {I|L}{I|L}VVYR 6 -1 52.713 0.0 0.0 4.0999 0.0 0.0 0.0 539.2268770807249 539.2268770807249 38.006981269092606 0.0 0.0 0.0 0 1.274227503252014 1.6989700043360187 0.0 0.5356668758921829 {I|L}{I|L}VVYR 4.0999 - 1343 + 1 1.429 106472.6 1.0 3799 5237 9022 HBL1_DMSO_200M_050219_1,9038 HBL1_DMSO_200M_050219_1,9038,IVLVRINQGQM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9039 47.386 496.0 432000.0 25 0 22545.0 + 44968 YPRELSNSV 9 229 532.7705754074816 1063.526597881763 2 532.7682372927666 MULTI CID FTMS 0 0 0 9022 326366.59375 0.6019065437064336 -1 0.075653076171875 17 Unmodified _YPRELSNSV_ ENSG00000163125|ENST00000369068|RPRD2;ENST00000492220.1_1_1:150381497-150445807:+|nuORF;nc|ENSG00000163125|Q5VT52-2|RPRD2;nc|ENSG00000163125|Q5VT52-3|RPRD2;nc|ENSG00000163125|Q5VT52-5|RPRD2 47.594388314883695 0.0456443387682827 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KTMKNSV 9 5 + 50.277 0.0 0.0 4.7273 4.7273 72.353 0.0 0.0 0.0 0.5435766232259169 6.720449851406514 0.5435766232259169 0.5435766232259169 0 0.4247425010840047 0.0 1.7769763493273798 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KTMKNSV;[AG]EKTMKNSV;[VS][QA]TMKNSV;[VG][QT]TMKNSV;{[TV]|[{I|L}S]}{[QG]|[NA]}TMKNSV;{NN|[MP]|[D{I|L}]|[EV]}C(Carbamidomethyl (C))[KT]KNSV;[QT]RTMKNSV;[AG]TRTMKNSV;[VS]N[VS]MKNSV;{[MG]|[TS]}SVSRKNSV 4.7273;4.6762;4.5898;4.3812;4.3437;4.2244;4.0681;4.017;4.0164;3.961 -;-;-;-;-;-;-;-;-;- 13145 1 1.429 165867.0 1.0 3800 5237 9022 HBL1_DMSO_200M_050219_1,9039 HBL1_DMSO_200M_050219_1,9039,YPRELSNSV True True YPRELSNSV 47.386422 532.768237292767 3120213.75 9022.0 ENST00000492220.1_1_1:150381497-150445807:+|nuORF;;nc|ENSG00000163125|Q5VT52-5|RPRD2;;nc|ENSG00000163125|Q5VT52-3|RPRD2;;nc|ENSG00000163125|Q5VT52-2|RPRD2;;ENSG00000163125|ENST00000369068|RPRD2 3.5475429693857827 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9040 47.396 526.0 323520.0 25 0 12185.0 -1 0 96 698.1288100974558 3485.607668154279 5 698.5309326052666 MULTI CID FTMS 0 0 0 9022 304548.0 0.2211022843453581 8 -0.6578598022460938 18 3 GWTP 4 -1 36.186 0.0 0.0 1.0381 0.0 0.0 3026.408987217963 0.0 3026.408987217963 0.0 25.295000083553205 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 GWTP 1.0381 - 114 1 1.429 125662.5 1.0 3801 5237 9022 HBL1_DMSO_200M_050219_1,9040 HBL1_DMSO_200M_050219_1,9040, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9041 47.399 178.0 1034400.0 25 0 125440.0 + 35928 SVPEKIERI 9 116 357.54521387881323 1069.6138122366397 3 357.5445739626884 MULTI CID FTMS 0 0 0 9022 264509.03125 0.4574880353991982 -4 0.29217529296875 19 Unmodified _SVPEKIERI_ ENSG00000078177|ENST00000261435|N4BP2;nc|ENSG00000078177|Q86UW6-2|N4BP2 23.78978130925829 0.2284941198415988 3 [VS]PEK{I|L}E[R{I|L}] 9 0 + 61.532 0.0 0.0 5.7528 5.7528 79.917 0.0 0.0 0.0 50.563113202512895 2.922152515121219 2.922152515121219 3.0102999566398125 0 0.3494850021680094 2.0 0.3807196863200844 0.3807196863200844 + + [VS]PEK{I|L}E[R{I|L}];[VS]PE{I|L}KE[R{I|L}];[VS]PEK{I|L}[W{I|L}]V;[VS]PE{I|L}K[W{I|L}]V;[VS]P{I|L}EKE[R{I|L}];[VS]P{I|L}EK[W{I|L}]V;[VS]P{I|L}[SG]{I|L}E[R{I|L}];[VS]{I|L}PEKE[R{I|L}];[VS]P{I|L}[SG]{I|L}[W{I|L}]V;[VS]{I|L}PEK[W{I|L}]V 5.7528;5.4713;5.22;4.9385;4.8339;4.3011;4.2545;4.1966;3.7217;3.6638 +;-;-;-;-;-;-;-;-;- + 132 + 1 1.429 160409.0 1.0 3802 5237 9022 HBL1_DMSO_200M_050219_1,9041 HBL1_DMSO_200M_050219_1,9041,SVPEKIERI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9042 47.408 527.0 233670.0 25 0 30149.0 9547 FLGTVEFLLLT 11 114 626.861411929458 0 626.8619262576103 PEAK CID FTMS 0 0 0 9022 241534.5 0.3331685832762398 -2 0.2087898254394531 20 Unmodified _FLGTVEFLLLT_ ENSG00000255804|ENST00000540461|OR6J1 34.40172386719151 0.1843838221482756 3 {I|L}ASV{[MG]|[TS]}V{I|L}T 9 7 56.331 0.0 0.0 4.5003 0.0 0.0 147.07035602578122 230.1147402399047 377.185096265686 0.0 0.0 0.0 0.0 0 1.2302046884880935 0.0 1.0629529932484498 0.0 {I|L}ASV{[MG]|[TS]}V{I|L}T 4.5003 - 289 + 1 1.429 97924.2 1.0 3803 5237 9022 HBL1_DMSO_200M_050219_1,9042 HBL1_DMSO_200M_050219_1,9042,FLGTVEFLLLT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9044 47.413 37.0 798970.0 25 0 63096.0 + 26204 NQIDHEVTV 9 71 527.7617792516775 1053.5090055701548 2 527.7619506716728 MULTI CID FTMS 0 0 0 9043 898473.9375 0.6154158698335418 1 -0.0641593933105468 1 Unmodified _NQIDHEVTV_ ENSG00000112159|ENST00000369393|MDN1 29.081581746732265 0.1611639662936252 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{M(Oxidation (M))|F}V]{[MS]|[{M(Oxidation (M))|F}A]}HTV 9 7 + 38.879 0.0 0.0 3.6904 3.6904 78.866 0.0 0.0 0.0 11.269184659718553 8.12913356642856 8.12913356642856 8.12913356642856 0 0.7742275032520141 2.0 0.3054621874040891 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{M(Oxidation (M))|F}V]{[MS]|[{M(Oxidation (M))|F}A]}HTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{M(Oxidation (M))|F}V]{[MS]|[{M(Oxidation (M))|F}A]}HS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[K{I|L}]Q[EC]{[TV]|[{I|L}S]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[K{I|L}]Q{[ES]|[DT]|[{I|L}C]}DT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ES]|[DT]|[{I|L}C]}Q[K{I|L}]C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{M(Oxidation (M))|F}V]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[HS];{[QN]|[E{I|L}]|[KN]}[HT]{[MS]|[{M(Oxidation (M))|F}A]}HTV;{[QN]|[E{I|L}]|[KN]}[HT]{[MS]|[{M(Oxidation (M))|F}A]}HS{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}D]|MM}{[TV]|[{I|L}S]} 3.6904;2.9188;2.6208;2.1879;2.1797;2.0584;1.0074;0.23577;0.2197 -;-;-;-;-;-;-;-;- 82 + 1 1.446 28057.3 1.0 3804 5238 9043 HBL1_DMSO_200M_050219_1,9044 HBL1_DMSO_200M_050219_1,9044,NQIDHEVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9045 47.415 75.0 858960.0 25 0 61350.0 + 41772 VPVESPRAI 9 76 484.283036882674 966.551520832148 2 484.2827636599541 MULTI CID FTMS 0 0 0 9043 480709.5625 0.7658636072561624 1 -0.0641593933105468 2 Unmodified _VPVESPRAI_ ENSG00000132676|ENST00000368336|DAP3;ENST00000462002.5_1_1:155679570-155696073:+|nuORF;ENST00000471523.1_1_1:155679570-155695881:+|nuORF;ENST00000496863.5_1_1:155679570-155695280:+|nuORF;nc|ENSG00000132676|P51398-3|DAP3 16.149105407346934 0.3995459350917656 3 VPVES 5 4 58.315 0.0 0.0 6.0334 0.0 0.0 0.0 452.2646883600219 452.2646883600219 46.89548565053657 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VPVES 6.0334 + + 107 + 1 1.446 53927.1 1.0 3805 5238 9043 HBL1_DMSO_200M_050219_1,9045 HBL1_DMSO_200M_050219_1,9045,VPVESPRAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9046 47.416 11.0 3139000.0 25 0 257710.0 + 41632 VPPPSAQEI 9 67 469.25301885211206 936.491484771024 2 469.2522155642509 MULTI CID FTMS 0 0 0 9043 2715800.25 0.2338984471910873 -3 0.2755126953125 3 Unmodified _VPPPSAQEI_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 14.838274106304384 0.4350285940865338 3 QE{I|L} 3 6 27.435 0.0 0.0 2.9296 0.0 0.0 548.29594618965 0.0 548.29594618965 0.0 21.95046257204389 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + QE{I|L} 2.9296 + + 63 1 1.446 35508.5 1.0 3806 5238 9043 HBL1_DMSO_200M_050219_1,9046 HBL1_DMSO_200M_050219_1,9046,VPPPSAQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9047 47.417 21.0 1776200.0 25 0 229650.0 + 25191 MTDDKITEV 9 66 526.2526444467808 1050.4907359603617 2 526.2526733279228 MULTI CID FTMS 0 0 0 9043 2548301.75 1.0 0 0.0 4 Unmodified _MTDDKITEV_ chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;ENSG00000148773|ENST00000368654|MKI67;nc|ENSG00000148773|P46013-2|MKI67;nc|ENSG00000148773|P46013-2|MKI67 32.78568957990786 0.1150597335874693 3 MT[{M(Oxidation (M))|F}V]T{I|L}D 7 6 58.086 0.0 0.0 5.5294 0.0 0.0 0.0 240.0991152399047 240.0991152399047 42.60172321607538 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 1.1549471895720984 0.0 MT[{M(Oxidation (M))|F}V]T{I|L}D 5.5294 - 565 + 1 1.446 36010.7 1.0 3807 5238 9043 HBL1_DMSO_200M_050219_1,9047 HBL1_DMSO_200M_050219_1,9047,MTDDKITEV True True MTDDKITEV 47.417034 526.252673327923 17965982.0 9043.0 nc|ENSG00000148773|P46013-2|MKI67;;ENSG00000148773|ENST00000368654|MKI67;;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67 3.954949696858724 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9048 47.418 31.0 1369100.0 25 0 156300.0 + 43214 WALNWSLPV 9 67 543.2906565684075 1084.5667602036149 2 543.2908813357353 MULTI CID FTMS 0 0 0 9043 1176741.25 0.5669013618018612 9 -0.7613143920898438 5 Unmodified _WALNWSLPV_ REV__ENST00000473097.5_1_1:1288733-1289815:-|nuORF 10.823927491677226 0.5436922275383211 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PER 5 -1 39.437 0.0 0.0 3.6362 0.0 0.0 0.0 442.2315157526001 442.2315157526001 28.11243137115873 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PER 3.6362 - 37 + 1 1.446 38813.3 1.0 3808 5238 9043 HBL1_DMSO_200M_050219_1,9048 HBL1_DMSO_200M_050219_1,9048,WALNWSLPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9049 47.419 34.0 1958400.0 25 0 264510.0 + -1 AYVHMVTHF 9 78 374.179807796016 0 374.1794006228447 PEAK CID FTMS 0 0 0 9043 1032729.5625 0.6387088163042658 -3 0.2755126953125 6 Oxidation (M) _AYVHM(Oxidation (M))VTHF_ nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6 20.41453444215458 0.197313647343139 3 A 1 -1 6.9897 0.0 0.0 0.93652 0.0 0.0 540.2391952045336 132.04583154849846 672.2850267530321 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.93652 + + 15 + 1 1.446 60023.4 1.0 3809 5238 9043 HBL1_DMSO_200M_050219_1,9049 HBL1_DMSO_200M_050219_1,9049,AYVHMVTHF False False AYVHMVTHF 47.41939 374.179400622845 37963768.5 9043.0 nc|ENSG00000139644|P55061-2|TMBIM6;;ENSG00000139644|ENST00000267115|TMBIM6 8.065617402394613 3.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9050 47.421 78.0 883990.0 25 0 66115.0 + 13652 HPVLPARSI 9 86 495.2982847095973 988.5820164859946 2 495.2980834841728 MULTI CID FTMS 0 0 0 9043 659667.0 0.579136543405973 -2 0.1423759460449218 7 Unmodified _HPVLPARSI_ ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF 19.361941925380144 0.3125782356748823 3 HPV{I|L} 4 5 36.938 0.0 0.0 3.7365 0.0 0.0 0.0 539.29544769479 539.29544769479 14.006375246153908 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + HPV{I|L} 3.7365 + + 152 + 1 1.446 59243.0 1.0 3810 5238 9043 HBL1_DMSO_200M_050219_1,9050 HBL1_DMSO_200M_050219_1,9050,HPVLPARSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9051 47.423 101.0 329750.0 25 0 41410.0 + 12141 GQLDTPGVHNV 11 70 568.7884972530832 0 568.7886230349541 PEAK CID FTMS 0 0 0 9043 506553.78125 1.0 0 0.0 8 Unmodified _GQLDTPGVHNV_ ENSG00000197771|ENST00000369077|MCMBP;nc|ENSG00000197771|Q9BTE3-3|MCMBP;nc|ENSG00000197771|Q9BTE3|MCMBP 17.44264345198275 0.3815305483796679 3 {I|L}DT 3 8 25.445 0.0 0.0 2.2408 0.0 0.0 185.0821767789268 618.301602015456 803.3837787943828 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 + {I|L}DT 2.2408 + + 53 + 1 1.446 32088.2 1.0 3811 5238 9043 HBL1_DMSO_200M_050219_1,9051 HBL1_DMSO_200M_050219_1,9051,GQLDTPGVHNV False True GQLDTPGVHNV 47.423346 568.788623034954 2692361.5 9043.0 ENSG00000197771|ENST00000369077|MCMBP;;nc|ENSG00000197771|Q9BTE3-3|MCMBP;;nc|ENSG00000197771|Q9BTE3|MCMBP 9.025330702463783 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9052 47.425 72.0 391380.0 25 0 21734.0 + + 43671 MFTEKTTTY 9 61 560.7628736796089 1119.5111944260177 2 561.2639037966728 MULTI CID FTMS 0 0 0 9043 487211.15625 1.0 0 0.0 9 Unmodified _YARRYNDY_ ENSG00000129292|ENST00000395386|PHF20L1 6.354104778181461 0.7857632046190106 3 Y 1 -1 14.604 0.0 0.0 1.3045 0.0 0.0 938.436744818399 0.0 938.436744818399 0.0 5.651668842475031 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3045 + + 26 + 1 1.446 26585.2 1.0 3812 5238 9043 HBL1_DMSO_200M_050219_1,9052 HBL1_DMSO_200M_050219_1,9052,YARRYNDY False False MFTEKTTTY 47.425046 561.263903796673 4272411.5 9043.0 ENSG00000129292|ENST00000395386|PHF20L1 2.546854774157206 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9053 47.428 153.0 237510.0 25 0 24617.0 + 42937 VVSEVDIAKAD 11 79 573.3059939338999 1144.5974349345995 2 573.3063842654228 MULTI CID FTMS 0 0 0 9043 425621.09375 1.0 0 0.0 10 Unmodified _VVSEVDIAKAD_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 30.7034409873982 0.3712764582118616 3 VVSEV{NN|[MP]|[D{I|L}]|[EV]}AK{[DA]|[EG]} 11 0 + 46.351 0.0 0.0 4.0496 4.0496 83.66 0.0 0.0 0.0 27.895876929559265 1.797868890719997 1.797868890719997 15.53782652053076 0 0.6677353201839438 2.0 0.0 0.7302046884880937 + + VVSEV{NN|[MP]|[D{I|L}]|[EV]}AK{[DA]|[EG]};VV[WE][W{I|L}]K{[DA]|[EG]} 4.0496;2.6921 +;- + 221 + 1 1.446 35548.7 1.0 3813 5238 9043 HBL1_DMSO_200M_050219_1,9053 HBL1_DMSO_200M_050219_1,9053,VVSEVDIAKAD False True VVSEVDIAKAD 47.428088 573.306384265423 1492628.75 9043.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1 6.48550271987915 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9054 47.436 447.0 285560.0 25 0 31129.0 -1 YPECEIRMM 9 102 630.7561343158019 1259.4977156984037 2 630.7569457888603 MULTI CID FTMS 0 0 0 9043 394249.28125 1.0 0 0.0 11 Carbamidomethyl (C),2 Oxidation (M) _YPEC(Carbamidomethyl (C))EIRM(Oxidation (M))M(Oxidation (M))_ ENSG00000066923|ENST00000615138|STAG3;nc|ENSG00000292277|Q9UJ98-2|STAG3;nc|ENSG00000292277|Q9UJ98-3|STAG3;nc|ENSG00000292277|Q9UJ98|STAG3 18.1463463914782 0.3454829746528889 3 YPES 4 -1 61.23 0.0 0.0 4.8615 0.0 0.0 0.0 780.2808321588499 780.2808321588499 32.82583442123752 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.4247425010840047 0.0 YPES 4.8615 - 465 + 1 1.446 100738.1 1.0 3814 5238 9043 HBL1_DMSO_200M_050219_1,9054 HBL1_DMSO_200M_050219_1,9054,YPECEIRMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9055 47.438 76.0 388850.0 25 0 32429.0 36618 TAQATAVRQ 9 71 473.2589527014579 0 473.2586852908134 PEAK CID FTMS 0 0 0 9043 347410.1875 0.5669980960871608 3 -0.2815704345703125 12 Unmodified _TAQATAVRQ_ ENST00000599425.5_1_19:50060962-50063306:-|nuORF;ENST00000600019.5_1_19:50060962-50063200:-|nuORF 4.3292370932331545 0.3444685223463734 3 AD 2 8 9.464 0.0 0.0 1.002 0.0 0.0 170.080758330847 585.3380831354124 755.4188414662594 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AD 1.002 - 6 + 1 1.446 30017.9 1.0 3815 5238 9043 HBL1_DMSO_200M_050219_1,9055 HBL1_DMSO_200M_050219_1,9055,TAQATAVRQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9056 47.441 169.0 399860.0 25 0 48850.0 + 14128 IAWERTKTV 9 97 368.5454809568479 1102.6146134707435 3 368.5451232790947 MULTI CID FTMS 0 0 0 9043 325709.5 0.8253295552231866 6 -0.5421981811523438 13 Unmodified _IAWERTKTV_ ENSG00000058729|ENST00000283109|RIOK2;ENST00000508991.1_1_5:96512756-96518871:-|nuORF;nc|ENSG00000058729|Q9BVS4-2|RIOK2 34.40172386719151 0.1061884637610825 3 {I|L}A{M(Oxidation (M))|F}AWS 6 7 49.902 0.0 0.0 4.5258 0.0 0.0 0.0 424.2318209283813 424.2318209283813 27.634439216679016 0.0 0.0 0.0 0 0.2302046884880938 1.3979400086720375 0.0 0.0 {I|L}A{M(Oxidation (M))|F}AWS 4.5258 - 222 + 1 1.446 63734.8 1.0 3816 5238 9043 HBL1_DMSO_200M_050219_1,9056 HBL1_DMSO_200M_050219_1,9056,IAWERTKTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9057 47.45 508.0 120250.0 25 0 8372.4 + 1000 AFYEHAQTY 9 117 565.2508696933867 1128.4871864535733 2 565.2517578005791 MULTI CID FTMS 0 0 0 9043 302350.3125 0.4837485514107801 2 -0.221893310546875 14 Unmodified _AFYEHAQTY_ ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11 49.93300154707207 0.0405168250806675 3 TQA{M(Oxidation (M))|F}TY 6 6 41.86 0.0 0.0 3.7094 0.0 0.0 399.17858562587816 0.0 399.17858562587816 0.0 27.16435380254772 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 TQA{M(Oxidation (M))|F}TY 3.7094 - 1072 + 1 1.446 49402.6 1.0 3817 5238 9043 HBL1_DMSO_200M_050219_1,9057 HBL1_DMSO_200M_050219_1,9057,AFYEHAQTY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9058 47.454 188.0 430610.0 25 0 54283.0 + 33211 SFLGLNTIYSV 11 97 405.2200544598448 0 405.2197753787041 PEAK CID FTMS 0 0 0 9043 265761.5 1.0 0 0.0 15 Unmodified _SFLGLNTIYSV_ REV__ENSG00000205336|ENST00000562631|ADGRG1;REV__ENST00000564907.5_1_16:57684180-57697491:+|nuORF;REV__ENST00000565539.5_1_16:57684180-57697491:+|nuORF;REV__nc|ENSG00000205336|Q9Y653-3|ADGRG1;REV__nc|ENSG00000205336|Q9Y653-4|ADGRG1;REV__nc|ENSG00000205336|Q9Y653-5|ADGRG1;REV__nc|ENSG00000205336|Q9Y653|ADGRG1 13.90604991867851 0.4141907700618076 3 S 1 -1 5.0886 0.0 0.0 0.62945 0.0 0.0 604.3143937323865 114.05648981265858 718.3708835450451 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 S 0.62945 + + 20 + 1 1.446 68792.0 1.0 3818 5238 9043 HBL1_DMSO_200M_050219_1,9058 HBL1_DMSO_200M_050219_1,9058,SFLGLNTIYSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9059 47.457 186.0 254100.0 25 0 18965.0 + 6673 EAYLGKTV 8 94 440.742318239149 879.470083545098 2 440.7424499392509 MULTI CID FTMS 0 0 0 9043 216746.890625 0.0266986024667029 11 -0.9301681518554688 16 Unmodified _EAYLGKTV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 25.399314129420983 0.5099049743284904 3 {[CP]|[EA]}Y{I|L}[KG]TV 8 0 + 22.049 0.0 0.0 2.507 2.507 69.379 0.0 0.0 0.0 11.079474676429708 1.6032622127862872 1.6032622127862872 1.9382002601611248 0 0.4247425010840047 0.0 0.2887254899964357 0.0 + + {[CP]|[EA]}Y{I|L}[KG]TV;{[CP]|[EA]}Y{I|L}[KG]S{I|L} 2.507;2.2866 +;- + 103 + 1 1.446 41642.7 1.0 3819 5238 9043 HBL1_DMSO_200M_050219_1,9059 HBL1_DMSO_200M_050219_1,9059,EAYLGKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9060 47.459 103.0 774090.0 25 0 212070.0 + 41698 DAHSQVCSI 9 104 480.24402358252 958.47349423184 2 480.2428161501884 MULTI CID FTMS 0 0 0 9043 223009.765625 0.3783949999326597 -3 0.2755126953125 17 Unmodified _VPSERGDTV_ ENSG00000117399|ENST00000310955|CDC20 20.453626601364224 0.2830276176381075 3 VPP 3 7 50.445 0.0 0.0 5.2631 0.0 0.0 0.0 662.2750948541624 662.2750948541624 32.996812376923046 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VPP 5.2631 - 164 + 1 1.446 67549.9 1.0 3820 5238 9043 HBL1_DMSO_200M_050219_1,9060 HBL1_DMSO_200M_050219_1,9060,VPSERGDTV False False DAHSQVCSI 47.459425 480.242816150188 1177105.25 9043.0 ENSG00000117399|ENST00000310955|CDC20 1.5361799796422322 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9061 47.465 248.0 496610.0 25 0 60281.0 + + -1 IAWERTKTV 9 131 552.724505013813 0 552.7246581912041 PEAK CID FTMS 0 0 0 9043 192350.65625 1.0 0 0.0 18 Carbamidomethyl (C) _LGEYYC(Carbamidomethyl (C))WN_ ENSG00000058729|ENST00000283109|RIOK2;ENST00000508991.1_1_5:96512756-96518871:-|nuORF;nc|ENSG00000058729|Q9BVS4-2|RIOK2 5.760428011301431 0.5786759180849727 3 AWVNE{I|L} 6 -1 15.024 0.0 0.0 1.3615 0.0 0.0 99.92902997195252 288.09892948290934 388.0279594548618 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 AWVNE{I|L} 1.3615 - 824 + 1 1.446 101893.9 1.0 3821 5238 9043 HBL1_DMSO_200M_050219_1,9061 HBL1_DMSO_200M_050219_1,9061,LGEYYCWN False False IAWERTKTV 47.465234 552.724658191204 3961838.0 9043.0 ENSG00000058729|ENST00000283109|RIOK2;;ENST00000508991.1_1_5:96512756-96518871:-|nuORF;;nc|ENSG00000058729|Q9BVS4-2|RIOK2 5.101488431294759 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9062 47.469 194.0 361140.0 25 0 65940.0 -1 KWTLMSQMWRF 11 90 510.5826786496981 1528.7262065492944 3 510.5830871462822 MULTI CID FTMS 0 0 0 9043 172544.25 0.9408615672778654 3 -0.2815704345703125 19 Oxidation (M) _KWTLM(Oxidation (M))SQMWRF_ ENST00000378024.8_2_11:62299262-62299337:-|nuORF 2.434785330301024 0.8636604596255422 3 VCAEAWV{I|L} 8 -1 60.003 0.0 0.0 3.925 0.0 0.0 639.2948945910069 0.0 639.2948945910069 0.0 39.5800214418599 0.0 0.0 0 1.1861818737241734 0.0 0.3807196863200844 0.0 VCAEAWV{I|L} 3.925 - 1346 + 1 1.446 58633.6 1.0 3822 5238 9043 HBL1_DMSO_200M_050219_1,9062 HBL1_DMSO_200M_050219_1,9062,KWTLMSQMWRF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9063 47.472 177.0 861190.0 25 0 55276.0 + 3743 DAFVGGHRI 9 168 324.5066773482036 970.4982026448108 3 324.5065490603447 MULTI CID FTMS 0 0 0 9043 170680.640625 0.5771079790022309 -1 0.0667228698730468 20 Unmodified _DAFVGGHRI_ ENSG00000167972|ENST00000301732|ABCA3 14.838274106304384 0.4350285940865338 3 GGV[WE] 5 7 19.833 0.0 0.0 2.0436 0.0 0.0 424.2544728009781 0.0 424.2544728009781 0.0 10.907100462803738 0.0 0.0 0 0.0 0.0 0.0 0.0 GGV[WE] 2.0436 - 84 1 1.446 123334.7 1.0 3823 5238 9043 HBL1_DMSO_200M_050219_1,9063 HBL1_DMSO_200M_050219_1,9063,DAFVGGHRI False True DAFVGGHRI 47.472375 324.506549060345 1342232.5 9043.0 ENSG00000167972|ENST00000301732|ABCA3 3.1209937731424966 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9065 47.477 36.0 236510.0 25 0 29259.0 44078 YIVFYSAKRK 10 27 637.8665930279752 1273.7186331227504 2 637.8666259646416 MULTI CID FTMS 0 0 0 9064 1711511.0 1.0 0 0.0 1 Unmodified _YIVFYSAKRK_ ENSG00000160007|ENST00000672722|ARHGAP35 0.4583401331227399 0.7245164002484112 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.446 13202.9 1.0 3824 5239 9064 HBL1_DMSO_200M_050219_1,9065 HBL1_DMSO_200M_050219_1,9065,YIVFYSAKRK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9066 47.488 650.0 267240.0 25 0 19779.0 11275 GEVCCWLCI 9 187 513.217343590278 1024.420134247356 2 513.2177612185478 MULTI CID FTMS 0 0 0 9064 135448.375 0.4932322565293689 1 -0.1577339172363281 2 Unmodified _GEVCCWLCI_ ENSG00000164082|ENST00000395052|GRM2;ENST00000296479.9_1_3:51747995-51752125:+|nuORF 12.531546534597751 0.4974689918368763 3 {[DA]|[EG]}VVE{M(Oxidation (M))|F} 6 6 40.411 0.0 0.0 3.9448 0.0 0.0 0.0 361.1077312534685 361.1077312534685 23.92790030352131 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.2302046884880938 0.0 {[DA]|[EG]}VVE{M(Oxidation (M))|F} 3.9448 - 355 1 1.446 141006.7 1.0 3825 5239 9064 HBL1_DMSO_200M_050219_1,9066 HBL1_DMSO_200M_050219_1,9066,GEVCCWLCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9067 47.493 287.0 189700.0 25 0 14277.0 -1 0 72 603.3018134942876 3011.4726851384376 5 603.7034789919853 MULTI CID FTMS 0 0 0 9064 981213.375 1.0 0 0.0 3 3 QAS{I|L}S 5 -1 22.563 0.0 0.0 0.74923 0.0 0.0 1805.870344698192 716.3466890924436 2522.2170337906355 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QAS{I|L}S 0.74923 - 295 + 1 1.446 51480.0 1.0 3826 5239 9064 HBL1_DMSO_200M_050219_1,9067 HBL1_DMSO_200M_050219_1,9067, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9068 47.5 351.0 156540.0 25 0 30584.0 -1 0 74 835.4502843620555 0 835.4499389529228 PEAK CID FTMS 0 0 0 9064 865118.125 1.0 0 0.0 4 3 K{M(Oxidation (M))|F}SD{[VA]|[{I|L}G]}AVG 9 -1 30.328 0.0 0.0 1.8172 0.0 0.0 212.15281374188595 579.2770479791624 791.4298617210484 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 K{M(Oxidation (M))|F}SD{[VA]|[{I|L}G]}AVG 1.8172 - 1012 + 1 1.446 40277.2 1.0 3827 5239 9064 HBL1_DMSO_200M_050219_1,9068 HBL1_DMSO_200M_050219_1,9068, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9069 47.506 346.0 81174.0 25 0 6660.1 -1 0 61 753.8759110836954 3011.474538468381 4 754.1274902224541 MULTI CID FTMS 0 0 0 9064 833359.0625 1.0 0 0.0 5 3 A{I|L}SA{I|L}SD{I|L} 8 -1 45.866 0.0 0.0 1.523 0.0 0.0 1749.800296380294 488.23740564517817 2238.0377020254723 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 A{I|L}SA{I|L}SD{I|L} 1.523 - 243 + 1 1.446 29046.8 1.0 3828 5239 9064 HBL1_DMSO_200M_050219_1,9069 HBL1_DMSO_200M_050219_1,9069, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9070 47.513 397.0 170280.0 25 0 6874.8 -1 DKAVYCRCW 9 83 629.2774534203095 0 629.1226684451103 PEAK CID FTMS 0 0 0 9064 16605.814453125 0.4234644528367443 1 -0.1577339172363281 6 2 Carbamidomethyl (C) _DKAVYC(Carbamidomethyl (C))RC(Carbamidomethyl (C))W_ ENSG00000122873|ENST00000333926|CISD1 3.5964929083625545 0.3444685223463734 3 {I|L}SA{I|L}SD 6 -1 38.321 0.0 0.0 3.0497 0.0 0.0 65.8997677314854 601.3208101861936 667.2205779176791 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {I|L}SA{I|L}SD 3.0497 - 325 + 1 1.446 57599.9 1.0 3829 5239 9064 HBL1_DMSO_200M_050219_1,9070 HBL1_DMSO_200M_050219_1,9070,DKAVYCRCW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9071 47.524 611.0 265110.0 25 0 43260.0 -1 0 103 859.7396608028238 2576.197153008671 3 860.0751220583916 MULTI CID FTMS 0 0 0 9064 386639.8125 1.0 0 0.0 7 3 [PS]SVGDVTV 9 -1 36.771 0.0 0.0 1.4273 0.0 0.0 0.0 1731.7366787257213 1731.7366787257213 13.541105356992617 0.0 0.0 0.0 0 0.0 0.0 1.9436726795685344 0.0 [PS]SVGDVTV 1.4273 - 3951 1 1.446 113959.5 1.0 3830 5239 9064 HBL1_DMSO_200M_050219_1,9071 HBL1_DMSO_200M_050219_1,9071, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9072 47.526 101.0 1550000.0 25 0 217840.0 + 43660 YARPSSEVI 9 109 511.2693515829526 1020.5241502327052 2 511.2704650759697 MULTI CID FTMS 0 0 0 9064 371647.15625 0.1202533497641468 -2 0.1308822631835937 8 Unmodified _YARPSSEVI_ ENSG00000066044|ENST00000407627|ELAVL1;nc|ENSG00000066044|Q15717-2|ELAVL1 49.55428908609986 0.0413471690215031 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[PS]SEV{I|L} 9 0 + 72.993 0.0 0.0 7.1525 7.1525 93.05 0.0 0.0 0.0 13.419693766594705 13.419693766594705 13.419693766594705 13.419693766594705 0 1.305462187404089 1.6989700043360187 0.805462187404089 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[PS]SEV{I|L};YA[{I|L}V][PS]C(Carbamidomethyl (C))V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]GS{M(Oxidation (M))|F}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]QYV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]GAYV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DG]RS{M(Oxidation (M))|F}V{I|L};YA[{I|L}V][PS]C(Carbamidomethyl (C)){I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[PS]M[PS]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DG]RAYV{I|L};Y[VP][RD]RC{I|L} 7.1525;5.8376;4.699;4.5317;4.404;4.0641;4.0133;3.8634;3.7692;3.5224 +;-;-;-;-;-;-;-;-;- + 773 1 1.446 122189.6 1.0 3831 5239 9064 HBL1_DMSO_200M_050219_1,9072 HBL1_DMSO_200M_050219_1,9072,YARPSSEVI True True YARPSSEVI 47.526112 511.27046507597 16143397.0 9064.0 nc|ENSG00000066044|Q15717-2|ELAVL1;;ELAVL1|p.T90P|1|0.43|ENSG00000066044|chr19:7981091-7981091|T/G|missense_variant;;ENSG00000066044|ENST00000407627|ELAVL1 5.869165738423665 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9073 47.529 130.0 1386600.0 25 0 186520.0 + + 21426 LPRAEVSRI 9 131 347.54540397301827 1039.6143825192548 3 347.5449706912041 MULTI CID FTMS 0 0 0 9064 329169.0 0.3201186651219227 -2 0.1308822631835937 9 Unmodified _LPGWVSRLL_ LCMT1|p.E297G|1|0.22|ENSG00000205629|chr16:25174942-25174942|A/G|missense_variant;nc|ENSG00000205629|Q9UIC8-3|LCMT1;nc|ENSG00000205629|Q9UIC8-2|LCMT1;ENSG00000205629|ENST00000399069|LCMT1 19.361941925380144 0.3125782356748823 3 {I|L}PRAEV{I|L}SR 9 -1 + 53.56 0.0 0.0 5.1519 5.1519 87.493 0.0 0.0 0.0 31.95966586702977 7.166987712964499 7.166987712964499 17.743500300354135 0 0.3252574989159953 0.6777807052660807 0.0 0.4247425010840047 {I|L}PRAEV{I|L}SR;{I|L}PR{I|L}{[DA]|[EG]}{I|L}SR;{I|L}PR{I|L}[{I|L}T][DG]R;{I|L}P[VG]W{I|L}{I|L}SR;{I|L}PRA[VP][Q{I|L}]{M(Oxidation (M))|F};{I|L}PRA[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};{I|L}PR{I|L}[PG][Q{I|L}]{M(Oxidation (M))|F};{I|L}PR{I|L}[PG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};{I|L}PRAQQ[KS]{I|L};{I|L}PR{I|L}[DV][TA]R 5.1519;3.4452;2.893;2.7686;2.6646;2.6206;2.4952;2.4512;2.2969;2.2647 -;-;-;-;-;-;-;-;-;- 251 + 1 1.446 150027.0 1.0 3832 5239 9064 HBL1_DMSO_200M_050219_1,9073 HBL1_DMSO_200M_050219_1,9073,LPGWVSRLL False False LPRAEVSRI 47.528754 347.544970691204 7960084.0 9064.0 LCMT1|p.E297G|1|0.22|ENSG00000205629|chr16:25174942-25174942|A/G|missense_variant;;nc|ENSG00000205629|Q9UIC8-3|LCMT1;;nc|ENSG00000205629|Q9UIC8-2|LCMT1;;ENSG00000205629|ENST00000399069|LCMT1 3.885937770207723 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9074 47.541 661.0 111640.0 25 0 13291.0 -1 0 75 786.1511108279228 0 786.1511108279228 PEAK CID FTMS 0 0 0 -1 0 10 3 {I|L}SA{I|L}S 5 -1 32.206 0.0 0.0 2.051 0.0 0.0 379.64958504719954 716.3457735650999 1095.9953586122997 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}SA{I|L}S 2.051 - 132 + 1 1.446 64156.4 1.0 3833 5239 9064 HBL1_DMSO_200M_050219_1,9074 HBL1_DMSO_200M_050219_1,9074, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9075 47.543 73.0 1031000.0 25 0 114560.0 11163 GELFGLLG 8 97 403.2268224373262 804.4390919414524 2 403.2264587283134 MULTI CID FTMS 0 0 0 9064 328752.625 0.7551393931685123 -1 0.0641593933105468 11 Unmodified _GELFGLLG_ nc|ENSG00000168487|P13497-5|BMP1 5.760428011301431 0.7893668129297577 3 {[DA]|[EG]}YV{I|L}PK 7 5 + 63.249 0.0 0.0 7.8625 7.8625 97.358 0.0 0.0 0.0 56.04728424724015 11.54901959985743 11.54901959985743 63.24880400574919 0 0.805462187404089 2.0 0.0 0.0 {[DA]|[EG]}YV{I|L}PK 7.8625 - 50 + 1 1.446 65881.1 1.0 3834 5239 9064 HBL1_DMSO_200M_050219_1,9075 HBL1_DMSO_200M_050219_1,9075,GELFGLLG False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 9076 47.544 51.0 1040100.0 25 0 155310.0 -1 CRPFEESGTCK 11 67 657.2831645978308 1312.5517762624615 2 657.2829467654228 MULTI CID FTMS 0 0 0 9064 233702.0 0.1446212882323401 -1 0.0641593933105468 12 Carbamidomethyl (C) _C(Carbamidomethyl (C))RPFEESGTCK_ ENSG00000152518|ENST00000282388|ZFP36L2 7.101721422024254 0.8416415510090076 3 {I|L}ETVQY{[QG]|[NA]} 8 -1 45.315 0.0 0.0 3.4524 0.0 0.0 376.0858936994157 0.0 376.0858936994157 0.0 34.830539606210266 0.0 0.0 0 0.5 0.0 0.6694451763165201 0.0 {I|L}ETVQY{[QG]|[NA]} 3.4524 - 189 1 1.446 48830.5 1.0 3835 5239 9064 HBL1_DMSO_200M_050219_1,9076 HBL1_DMSO_200M_050219_1,9076,CRPFEESGTCK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9077 47.549 244.0 148430.0 25 0 10378.0 -1 0 68 611.9692706084774 1832.885982425632 3 612.3028442263603 MULTI CID FTMS 0 0 0 9064 238389.1875 0.7742809881990076 -1 0.0641593933105468 13 3 {M(Oxidation (M))|F}Y 2 -1 17.959 0.0 0.0 0.97981 0.0 0.0 1504.7442911730266 0.0 1504.7442911730266 0.0 2.8530577773128307 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.97981 - 91 + 1 1.446 37520.5 1.0 3836 5239 9064 HBL1_DMSO_200M_050219_1,9077 HBL1_DMSO_200M_050219_1,9077, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9078 47.562 767.0 64565.0 25 0 3981.3 + 29695 QPFNWLFRWER 11 94 789.9048950076103 0 789.9048950076103 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _QPFNWLFRWER_ REV__ENSG00000215262|ENST00000399881|KCNU1 1.1933415558491238 0.4761840153648598 3 {I|L}E[{M(Oxidation (M))|F}V]VMAT 8 -1 27.172 0.0 0.0 1.7222 0.0 0.0 547.2342862287124 137.0720156305297 684.3063018592421 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}E[{M(Oxidation (M))|F}V]VMAT 1.7222 - 1535 + 1 1.446 37703.1 1.0 3837 5239 9064 HBL1_DMSO_200M_050219_1,9078 HBL1_DMSO_200M_050219_1,9078,QPFNWLFRWER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9079 47.575 747.0 68264.0 25 0 3280.1 -1 YMLHQFLQYHV 11 96 747.8660533230907 0 747.8693725466728 PEAK CID FTMS 0 0 0 -1 0 15 Oxidation (M) _YM(Oxidation (M))LHQFLQYHV_ ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENST00000589409.1_1_18:21109949-21110297:+|nuORF;ENST00000591367.5_1_18:21109371-21111665:+|nuORF 5.731851221503515 0.47618401536486 3 MVPPP 5 -1 25.433 0.0 0.0 1.7027 0.0 0.0 747.3593516639563 222.08802210025627 969.4473737642126 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 MVPPP 1.7027 - 93 + 1 1.446 41812.4 1.0 3838 5239 9064 HBL1_DMSO_200M_050219_1,9079 HBL1_DMSO_200M_050219_1,9079,YMLHQFLQYHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9080 47.589 749.0 162000.0 25 0 10616.0 -1 0 128 620.6407355159536 1858.900377148061 3 620.9755126833916 MULTI CID FTMS 0 0 0 9064 161277.890625 1.0 0 0.0 16 3 {[NV]|[RG]}{M(Oxidation (M))|F}H{I|L}QSANVM 11 -1 48.128 0.0 0.0 2.5891 0.0 0.0 0.0 615.3237948402995 615.3237948402995 31.184951407624588 0.0 0.0 0.0 0 0.5 0.0 1.0 0.0 {[NV]|[RG]}{M(Oxidation (M))|F}H{I|L}QSANVM 2.5891 - 4031 1 1.446 93435.1 1.0 3839 5239 9064 HBL1_DMSO_200M_050219_1,9080 HBL1_DMSO_200M_050219_1,9080, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9081 47.601 667.0 56224.0 25 0 3568.3 + 19324 LELTWTKGRRS 11 79 673.8824417713487 0 673.8841430544853 PEAK CID FTMS 0 0 0 9064 162019.09375 1.0 0 0.0 17 Unmodified _LELTWTKGRRS_ REV__ENSG00000155561|ENST00000285968|NUP205 8.745405648335112 0.4618489994582195 3 QT{I|L} 3 -1 18.302 0.0 0.0 1.36 0.0 0.0 761.4359518026598 239.1037233942016 1000.5396751968614 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 QT{I|L} 1.36 - 121 + 1 1.446 36006.7 1.0 3840 5239 9064 HBL1_DMSO_200M_050219_1,9081 HBL1_DMSO_200M_050219_1,9081,LELTWTKGRRS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9082 47.603 77.0 543930.0 25 0 34758.0 + 39554 VAYQREPQI 9 90 552.2959642988719 1102.5773756645438 2 552.2931396365166 MULTI CID FTMS 0 0 0 9064 116146.96875 0.0740644476351406 -4 0.3396720886230469 18 Unmodified _VAYQREPQI_ ENSG00000165271|ENST00000297990|NOL6;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6 55.50274090549119 0.0285720310785888 3 VAYQ{[RE]|[WV]}PQ{I|L} 9 0 + 79.452 0.0 0.0 7.206 7.206 91.328 0.0 0.0 0.0 50.79235295117982 18.38985221547752 18.38985221547752 9.208187539523747 0 1.1861818737241734 1.6989700043360187 0.0 1.1549471895720984 + + VAYQ{[RE]|[WV]}PQ{I|L};VAY[AG]{[RE]|[WV]}PQ{I|L};VAW[W{I|L}]RC(Carbamidomethyl (C)){I|L};VAYQ{[RE]|[WV]}P[AG]{I|L};VAW[W{I|L}]R[CG]{I|L};VA[VS]{[VA]|[{I|L}G]}ERC(Carbamidomethyl (C)){I|L};VAW[W{I|L}]{[MG]|[TS]}Q{I|L};VAW{[NV]|[RG]}{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C)){I|L};{[VA]|[{I|L}G]}[VS]{[RE]|[WV]}QCV{I|L};{[VA]|[{I|L}G]}[VS]{[RE]|[WV]}C(Carbamidomethyl (C))AV{I|L} 7.206;6.3709;6.2576;5.9857;5.4175;5.2435;5.1445;4.8715;4.2128;4.1688 +;-;-;-;-;-;-;-;-;- + 323 + 1 1.446 37396.4 1.0 3841 5239 9064 HBL1_DMSO_200M_050219_1,9082 HBL1_DMSO_200M_050219_1,9082,VAYQREPQI True True VAYQREPQI 47.602887 552.293139636517 37197356.0 9064.0 ENSG00000165271|ENST00000297990|NOL6;;nc|ENSG00000165271|Q9H6R4-2|NOL6;;nc|ENSG00000165271|Q9H6R4-4|NOL6 6.077394962310791 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9083 47.615 718.0 88434.0 25 0 3516.8 8972 FAQRNLRRDK 10 118 652.373634363471 1302.7327157937418 2 652.3765136599541 MULTI CID FTMS 0 0 0 9064 109323.6484375 0.5542201070289822 -8 0.6007804870605469 19 Unmodified _FAQRNLRRDK_ ENSG00000100353|ENST00000216190|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 1.6526216038709556 0.7189921496796233 3 E 1 10 7.7866 0.0 0.0 0.59771 0.0 0.0 651.4324859125037 519.2220553033811 1170.6545412158848 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 E 0.59771 - 364 + 1 1.446 51605.7 1.0 3842 5239 9064 HBL1_DMSO_200M_050219_1,9083 HBL1_DMSO_200M_050219_1,9083,FAQRNLRRDK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9084 47.63 800.0 92782.0 25 0 34290.0 15888 ISSALAAIC 9 70 848.4567073331074 847.4494308665073 1 848.4600707888603 MULTI CID FTMS 0 0 0 9064 83393.515625 0.8436429824124634 -5 0.3457984924316406 20 Unmodified _ISSALAAIC_ ENSG00000163482|ENST00000295709|STK36;nc|ENSG00000163482|Q9NRP7-2|STK36 7.910154910731844 0.6385446671287552 3 Q 1 9 12.218 0.0 0.0 1.4418 0.0 0.0 701.3802150235371 0.0 701.3802150235371 0.0 4.581662565709548 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 1.4418 - 138 + 1 1.446 55660.9 0.8999999761581421 3843 5239 9064 HBL1_DMSO_200M_050219_1,9084 HBL1_DMSO_200M_050219_1,9084,ISSALAAIC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9086 47.635 8.7 5537500.0 25 0 1351100.0 + 21235 LPDKGQKLI 9 78 337.87810075397203 1010.6124728621162 3 337.8778564333916 MULTI CID FTMS 0 0 0 9085 5915004.0 0.7341105053376251 2 -0.1489753723144531 1 Unmodified _LPDKGQKLI_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 34.40172386719151 0.1061884637610825 3 {I|L}PDK{[QG]|[NA]}K{I|L}{I|L} 9 0 + 43.382 0.0 0.0 4.2926 4.2926 86.067 0.0 0.0 0.0 10.661837734644593 10.686362358410122 10.661837734644593 43.381769757952426 0 0.5 1.154901959985743 0.0 0.0 + + {I|L}PDK{[QG]|[NA]}K{I|L}{I|L} 4.2926 + + 105 + 1 1.447 47801.7 1.0 3844 5240 9085 HBL1_DMSO_200M_050219_1,9086 HBL1_DMSO_200M_050219_1,9086,LPDKGQKLI True True LPDKGQKLI 47.634628 337.877856433392 297755450.0 9085.0 ENSG00000116830|ENST00000369466|TTF2;;nc|ENSG00000116830|Q9UNY4-2|TTF2 3.268601576487223 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9087 47.636 40.0 696430.0 25 0 111230.0 + 31730 YYSPTKNEI 9 50 557.301652081327 1668.8831268441809 3 557.3022338747978 MULTI CID FTMS 0 0 0 9085 199546.796875 0.0391225462853815 1 -0.0596771240234375 2 Unmodified _RRRWHWHWPRP_ ENSG00000117298|ENST00000374893|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1;nc|ENSG00000117298|P42892-2|ECE1 0.0 0.8751479354844584 3 [{I|L}V]NSNE 6 11 29.162 0.0 0.0 1.7474 0.0 0.0 0.0 1009.548934299512 1009.548934299512 1.714497253442531 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.3807196863200844 [{I|L}V]NSNE 1.7474 - 138 1 1.447 29185.0 1.0 3845 5240 9085 HBL1_DMSO_200M_050219_1,9087 HBL1_DMSO_200M_050219_1,9087,RRRWHWHWPRP False False YYSPTKNEI 47.635806 557.302233874798 10017975.0 9085.0 ENSG00000117298|ENST00000374893|ECE1;;nc|ENSG00000117298|P42892-3|ECE1;;nc|ENSG00000117298|P42892-4|ECE1;;nc|ENSG00000117298|P42892-2|ECE1 8.069193363189697 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9088 47.637 2.4 10958000.0 25 0 1413400.0 36971 TFEWVDSM 8 55 507.71336082882016 1013.4121687244404 2 507.7139465212822 MULTI CID FTMS 0 0 0 9085 22277096.0 0.811987429904103 -1 0.1577339172363281 3 Unmodified _TFEWVDSM_ ENSG00000112159|ENST00000369393|MDN1 14.581692164780916 0.6954967302934248 3 SM 2 6 23.856 0.0 0.0 2.3541 0.0 0.0 777.3289758306888 0.0 777.3289758306888 0.0 12.941205218831415 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 + SM 2.3541 + + 41 + 1 1.447 28644.2 1.0 3846 5240 9085 HBL1_DMSO_200M_050219_1,9088 HBL1_DMSO_200M_050219_1,9088,TFEWVDSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9089 47.638 3.5 10656000.0 25 0 1069500.0 + 24962 MPPPPPQGV 9 67 460.2385793050109 918.462605676822 2 460.2390319705009 MULTI CID FTMS 0 0 0 9085 15123098.0 0.5023716251661606 17 -1.5625267028808594 4 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 56.541270873467816 0.0279970378729908 3 {[HG]|PP}NNPPQR 8 5 + 37.612 0.0 0.0 4.0951 4.0951 79.542 0.0 0.0 0.0 0.9691001300805624 18.404112767164733 0.9691001300805624 7.572522344668609 0 1.1237125054200234 0.0 0.0 0.0 {[HG]|PP}NNPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;{[HG]|PP}GGNPPQR;{[HG]|PP}NGGPPQR;[VG][EP]HPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQGV;{[HG]|PP}GGGGPPQR;{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}[WK]GV 4.0951;3.2707;3.0867;3.0867;2.8639;2.112;2.0841;0.86549 -;+;-;-;-;-;-;- + 184 1 1.447 35144.2 1.0 3847 5240 9085 HBL1_DMSO_200M_050219_1,9089 HBL1_DMSO_200M_050219_1,9089,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9090 47.639 15.0 6668000.0 25 0 1142700.0 + 14391 IFHEKTSEF 9 106 379.857380291236 1136.550311473908 3 379.8571960330009 MULTI CID FTMS 0 0 0 9085 3476883.5 0.4954364739244486 -1 0.1577339172363281 5 Unmodified _IFHEKTSEF_ ENSG00000003989|ENST00000494857|SLC7A2;nc|ENSG00000003989|P52569-2|SLC7A2;nc|ENSG00000003989|P52569-3|SLC7A2 37.97399986684836 0.0865783450051559 3 {I|L}{M(Oxidation (M))|F}HSY 5 5 52.585 0.0 0.0 4.6267 0.0 0.0 0.0 486.2076815240844 486.2076815240844 4.96026613540014 0.0 0.0 0.0 0 0.6549471895720985 0.0 1.2302046884880935 0.0 {I|L}{M(Oxidation (M))|F}HSY 4.6267 - 622 + 1 1.447 86043.2 1.0 3848 5240 9085 HBL1_DMSO_200M_050219_1,9090 HBL1_DMSO_200M_050219_1,9090,IFHEKTSEF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9091 47.641 31.0 815530.0 25 0 67066.0 + 41180 VPDQPHPEI 9 62 516.2614406525612 1030.5083283719223 2 516.2615844607353 MULTI CID FTMS 0 0 0 9085 1622043.25 0.2661826358040889 3 -0.1887741088867187 6 Unmodified _VPDQPHPEI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 20.41453444215458 0.284085796332423 3 VPDQ 4 5 47.836 0.0 0.0 4.642 0.0 0.0 0.0 588.2802828424436 588.2802828424436 34.34115329172698 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 + VPDQ 4.642 + + 28 + 1 1.447 26982.8 1.0 3849 5240 9085 HBL1_DMSO_200M_050219_1,9091 HBL1_DMSO_200M_050219_1,9091,VPDQPHPEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9092 47.642 34.0 2100800.0 25 0 231510.0 + 43222 WAPIRDGASI 10 85 362.529520375864 1084.566731727792 3 362.5293456912041 MULTI CID FTMS 0 0 0 9085 1613111.125 0.2854407424345498 12 -1.025714874267578 7 Unmodified _WAPIRDGASI_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 17.11289562659939 0.5604042439455784 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 5 -1 48.121 0.0 0.0 4.4369 0.0 0.0 0.0 485.2444857233032 485.2444857233032 29.96051433204192 0.0 0.0 0.0 0 0.7134679910804405 1.6989700043360187 0.805462187404089 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 4.4369 - 170 + 1 1.447 65471.3 1.0 3850 5240 9085 HBL1_DMSO_200M_050219_1,9092 HBL1_DMSO_200M_050219_1,9092,WAPIRDGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9093 47.644 106.0 1045400.0 25 0 140400.0 + 45901 YYSPTKNEI 9 123 557.7745869453878 0 557.7745849490166 PEAK CID FTMS 0 0 0 9085 991871.0 1.0 0 0.0 8 Unmodified _YYSPTKNEI_ ENSG00000117298|ENST00000374893|ECE1;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 49.93300154707207 0.0318517243429362 3 SRMSPT 6 7 31.735 0.0 0.0 2.85 0.0 0.0 326.1275223227115 125.07242761783438 451.1999499405459 0.0 0.0 0.0 0.0 0 1.3182503180159344 0.0 0.8882104921644451 0.7302046884880937 SRMSPT 2.85 - 627 + 1 1.447 87729.7 1.0 3851 5240 9085 HBL1_DMSO_200M_050219_1,9093 HBL1_DMSO_200M_050219_1,9093,YYSPTKNEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9094 47.646 96.0 1344800.0 25 0 140880.0 39568 VCMCLYSSM 9 144 518.7042416705359 1035.3939304078715 2 518.7046386599541 MULTI CID FTMS 0 0 0 9085 865336.3125 0.8914688871754671 -2 0.221893310546875 9 Unmodified _VCMCLYSSM_ L1PA4_dup2322|chr3:122637795-122638815:-|1.0062474184292576|0.3979125247020247|1.34|46.0|60|3|anti-sense;L1PA4_dup6280|chr8:134066585-134067163:+|1.1433684813113842|0.0010478202553529|10.09|48.0|31|2|anti-sense;L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|112|3|anti-sense;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|311|3|anti-sense 28.486842064014134 0.1687311288560894 3 T{M(Oxidation (M))|F}M[W{M(Oxidation (M))|F}]SSM 8 5 + 55.145 0.0 0.0 5.326 5.326 88.989 0.0 0.0 0.0 40.761174676690274 9.6374221802795 9.6374221802795 27.34479959764278 0 1.4802046884880935 0.0 1.1651868414918252 0.0 T{M(Oxidation (M))|F}M[W{M(Oxidation (M))|F}]SSM;{[ET]|[MV]}[C(Carbamidomethyl (C))H]EMVM;{[MS]|[{M(Oxidation (M))|F}A]}S{[YC]|[HE]}{[ES]|[DT]|[{I|L}C]}VM;[NP]C(Carbamidomethyl (C))C(Carbamidomethyl (C))QQVM;{[MS]|[{M(Oxidation (M))|F}A]}{[YC]|[HE]}D{I|L}SSM;{[MS]|[{M(Oxidation (M))|F}A]}{[YC]|[HE]}S{[ES]|[DT]|[{I|L}C]}VM;{[MS]|[{M(Oxidation (M))|F}A]}{[YC]|[HE]}[TA]MVM;{[MS]|[{M(Oxidation (M))|F}A]}{[YC]|[HE]}D{[MG]|[TS]}VM;{[ET]|[MV]}[C(Carbamidomethyl (C))H]NASSM;{[MS]|[{M(Oxidation (M))|F}A]}S{[YC]|[HE]}{NN|[MP]|[D{I|L}]|[EV]}SM 5.326;2.685;2.4491;2.3982;2.3392;2.1208;2.1089;1.9507;1.9001;1.6674 -;-;-;-;-;-;-;-;-;- 647 + 1 1.447 103428.9 1.0 3852 5240 9085 HBL1_DMSO_200M_050219_1,9094 HBL1_DMSO_200M_050219_1,9094,VCMCLYSSM False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 9095 47.647 47.0 921580.0 25 0 75908.0 + 2184 AQAPDLQRV 9 77 499.274774576537 996.534996219874 2 499.2747680544853 MULTI CID FTMS 0 0 0 9085 838786.4375 0.0110898998399792 16 -1.4520797729492188 10 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 20.41453444215458 0.284085796332423 3 [QA]APDV 6 3 30.947 0.0 0.0 3.1055 0.0 0.0 0.0 412.2329805963501 412.2329805963501 16.343115646969935 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 [QA]APDV 3.1055 - 46 + 1 1.447 37340.6 1.0 3853 5240 9085 HBL1_DMSO_200M_050219_1,9095 HBL1_DMSO_200M_050219_1,9095,AQAPDLQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9096 47.649 71.0 882420.0 25 0 119160.0 41174 VPDGFKVG 8 66 409.7241223835629 817.4336918339258 2 409.7240478396416 MULTI CID FTMS 0 0 0 9085 770415.4375 0.8381637412370895 -1 0.1577339172363281 11 Unmodified _VPDGFKVG_ ENSG00000123572|ENST00000243300|NRK;nc|ENSG00000123572|Q7Z2Y5-2|NRK 9.347437153973935 0.7675937258251505 3 [DV]PVN{M(Oxidation (M))|F}K 7 5 + 60.463 0.0 0.0 7.3967 7.3967 92.599 0.0 0.0 0.0 46.24298247225546 3.794482255454525 3.794482255454525 9.33053210369387 0 0.75 2.0 0.0 0.4247425010840047 [DV]PVN{M(Oxidation (M))|F}K;[DV]PVGG{M(Oxidation (M))|F}K;[DV]PKK[MT] 7.3967;6.2553;4.9374 -;-;- 106 + 1 1.447 53061.0 1.0 3854 5240 9085 HBL1_DMSO_200M_050219_1,9096 HBL1_DMSO_200M_050219_1,9096,VPDGFKVG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9097 47.651 77.0 811810.0 25 0 116890.0 + 13600 HPMPRVNEI 9 75 546.7841986702939 1091.5538444073875 2 546.7850829958916 MULTI CID FTMS 0 0 0 9085 624449.875 0.5968521407725925 -1 0.1577339172363281 12 Unmodified _HPMPRVNEI_ ENSG00000084774|ENST00000264705|CAD 12.240655878213236 0.5053430591993562 3 HPM 3 6 33.188 0.0 0.0 3.0404 0.0 0.0 0.0 723.3797745062989 723.3797745062989 8.585835472837235 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 + HPM 3.0404 + + 51 + 1 1.447 52276.8 1.0 3855 5240 9085 HBL1_DMSO_200M_050219_1,9097 HBL1_DMSO_200M_050219_1,9097,HPMPRVNEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9098 47.654 160.0 665340.0 25 0 96587.0 + 32559 SAYAPARL 8 91 424.2287978809596 846.4430428287192 2 424.7349731326103 MULTI CID FTMS 0 0 0 9085 545684.625 0.469401838800398 -4 0.3642692565917969 13 Unmodified _SARGRFPG_ ENSG00000162063|ENST00000397066|CCNF 5.760428011301431 0.7893668129297577 3 {[SA]|[TG]}YC 4 6 27.078 0.0 0.0 3.1991 0.0 0.0 0.0 419.2834108309255 419.2834108309255 0.1477912479540073 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2887254899964357 0.0 {[SA]|[TG]}YC 3.1991 - 234 1 1.447 88010.1 1.0 3856 5240 9085 HBL1_DMSO_200M_050219_1,9098 HBL1_DMSO_200M_050219_1,9098,SARGRFPG False False SAYAPARL 47.653899 424.73497313261 3437493.5 9085.0 ENSG00000162063|ENST00000397066|CCNF 5.308612028757731 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9099 47.656 82.0 1139600.0 25 0 219020.0 + 33936 FQSKAFRAV 9 99 351.4604045104677 1051.3593841316033 3 351.4602233767509 MULTI CID FTMS 0 0 0 9085 497649.9375 1.0 0 0.0 14 Unmodified _SLGSDDDDND_ ENSG00000163781|ENST00000260810|TOPBP1 6.723162845929126 0.6955379296933136 3 TMS 3 9 31.555 0.0 0.0 3.0013 0.0 0.0 0.0 729.2165549440296 729.2165549440296 13.595756168365014 0.0 0.0 0.0 0 0.1109243748081781 0.0 0.4247425010840047 0.0 TMS 3.0013 - 86 + 1 1.447 80191.5 1.0 3857 5240 9085 HBL1_DMSO_200M_050219_1,9099 HBL1_DMSO_200M_050219_1,9099,SLGSDDDDND False False FQSKAFRAV 47.655749 351.460223376751 1050868.0 9085.0 ENSG00000163781|ENST00000260810|TOPBP1 -0.3776638309160868 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9100 47.658 99.0 721620.0 25 0 73390.0 -1 0 98 364.7268096052179 727.4390662772358 2 364.7269164919853 MULTI CID FTMS 0 0 0 9085 477864.75 1.0 0 0.0 15 3 A{M(Oxidation (M))|F}{I|L}HK{I|L} 6 -1 + 50.263 0.0 0.0 6.9096 6.9096 82.64 0.0 0.0 0.0 16.197887582883936 2.498774732165998 2.498774732165998 2.498774732165998 0 0.3252574989159953 0.0 0.0 0.2396518287104437 A{M(Oxidation (M))|F}{I|L}HK{I|L};A{M(Oxidation (M))|F}{I|L}H{I|L}K;A{M(Oxidation (M))|F}{I|L}{I|L}HK 6.9096;6.5661;5.167 -;-;- 78 + 1 1.447 62809.1 1.0 3858 5240 9085 HBL1_DMSO_200M_050219_1,9100 HBL1_DMSO_200M_050219_1,9100, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9101 47.666 446.0 513540.0 25 0 41473.0 -1 VRVDKDCAYC 10 177 643.2869137989755 1284.559274664751 2 643.2878295779228 MULTI CID FTMS 0 0 0 9085 385584.53125 0.677313702714809 -1 0.1577339172363281 16 2 Carbamidomethyl (C) _VRVDKDC(Carbamidomethyl (C))AYC(Carbamidomethyl (C))_ ENSG00000132470|ENST00000200181|ITGB4;ENST00000580542.5_1_17:73720783-73737087:+|nuORF;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;nc|ENSG00000132470|P16144-4|ITGB4;nc|ENSG00000132470|P16144-5|ITGB4 10.073929032068715 0.6785112666868882 3 [RV]{I|L}QSE{M(Oxidation (M))|F}CDA 10 -1 71.374 0.0 0.0 5.5563 0.0 0.0 0.0 133.00774555193416 133.00774555193416 48.38405027729869 0.0 0.0 0.0 0 0.75 0.721246399047171 1.1549471895720984 0.3252574989159953 [RV]{I|L}QSE{M(Oxidation (M))|F}CDA 5.5563 - 2272 1 1.447 168112.8 1.0 3859 5240 9085 HBL1_DMSO_200M_050219_1,9101 HBL1_DMSO_200M_050219_1,9101,VRVDKDCAYC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9102 47.671 277.0 532760.0 25 0 36756.0 + 2198 AQAPPTAQL 9 155 448.7454198362124 895.4762867392247 2 448.7450134158134 MULTI CID FTMS 0 0 0 9085 339983.09375 0.2772764380684003 5 -0.3692436218261719 17 Unmodified _AQAPPTAQL_ ENSG00000118513|ENST00000341911|MYB;nc|ENSG00000118513|P10242-10|MYB;nc|ENSG00000118513|P10242-11|MYB;nc|ENSG00000118513|P10242-12|MYB;nc|ENSG00000118513|P10242-2|MYB;nc|ENSG00000118513|P10242-3|MYB;nc|ENSG00000118513|P10242-5|MYB;nc|ENSG00000118513|P10242-6|MYB;nc|ENSG00000118513|P10242-7|MYB;nc|ENSG00000118513|P10242-8|MYB;nc|ENSG00000118513|P10242-9|MYB;nc|ENSG00000118513|P10242|MYB 45.69961567697781 0.0497987121815769 3 [QA]A{I|L} 4 5 23.328 0.0 0.0 2.6051 0.0 0.0 0.0 509.2363324758061 509.2363324758061 0.4829499240304109 0.0 0.0 0.0 0 0.3807196863200844 0.3565473235138126 0.0 0.6747425010840047 [QA]A{I|L} 2.6051 - 468 1 1.447 116440.9 1.0 3860 5240 9085 HBL1_DMSO_200M_050219_1,9102 HBL1_DMSO_200M_050219_1,9102,AQAPPTAQL True True AQAPPTAQL 47.670932 448.745013415813 10285977.0 9085.0 nc|ENSG00000118513|P10242-10|MYB;;nc|ENSG00000118513|P10242-3|MYB;;nc|ENSG00000118513|P10242-9|MYB;;nc|ENSG00000118513|P10242-12|MYB;;nc|ENSG00000118513|P10242|MYB;;nc|ENSG00000118513|P10242-6|MYB;;ENSG00000118513|ENST00000341911|MYB;;nc|ENSG00000118513|P10242-8|MYB;;nc|ENSG00000118513|P10242-5|MYB;;nc|ENSG00000118513|P10242-7|MYB;;nc|ENSG00000118513|P10242-11|MYB;;nc|ENSG00000118513|P10242-2|MYB 3.8510414759318032 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9103 47.679 464.0 529780.0 25 0 51692.0 + 35930 SVPEKIERI 9 205 535.8133733762826 1069.612193819365 2 535.8146850466728 MULTI CID FTMS 0 0 0 9085 334998.0 0.3536680244916569 5 -0.3692436218261719 18 Unmodified _SVPEKIERI_ ENSG00000078177|ENST00000261435|N4BP2;nc|ENSG00000078177|Q86UW6-2|N4BP2 43.77239144664712 0.0547478964384323 3 [VS]PEK{I|L}ER{I|L} 9 0 + 66.405 0.0 0.0 6.2084 6.2084 90.041 0.0 0.0 0.0 24.59501677275331 12.350691190150194 12.350691190150194 12.350691190150194 0 0.3252574989159953 2.0 0.5 0.3494850021680094 + + [VS]PEK{I|L}ER{I|L};[VS]PEK{I|L}{I|L}ER;[VS]PEK{I|L}{I|L}VW;[VS]PEK{I|L}E{I|L}R;[VS]PEK{I|L}[W{I|L}]V;[VS]PEK{I|L}{I|L}EGV;[VS]P[RN][WK]A{I|L};[VS][VS][PA]{I|L}ER{I|L};[VS]P[RN][QT]R{I|L};[VS]{I|L}[HK]MSR{I|L} 6.2084;5.0537;5.024;4.8701;4.5845;4.4032;3.4899;3.2701;3.1961;2.6408 +;-;-;-;-;-;-;-;-;- + 1436 + 1 1.447 193100.1 1.0 3861 5240 9085 HBL1_DMSO_200M_050219_1,9103 HBL1_DMSO_200M_050219_1,9103,SVPEKIERI True True SVPEKIERI 47.679156 535.814685046673 35836032.0 9085.0 nc|ENSG00000078177|Q86UW6-2|N4BP2;;ENSG00000078177|ENST00000261435|N4BP2 3.3013407389322915 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9104 47.682 119.0 1130300.0 25 0 145120.0 + 10007 FPLETPSL 8 123 452.2448835529209 902.4752141726418 2 452.2455016970634 MULTI CID FTMS 0 0 0 9085 369532.375 0.4947363145055743 -1 0.1577339172363281 19 Unmodified _FPLETPSL_ REV__ENSG00000135960|ENST00000258443|EDAR;REV__nc|ENSG00000135960|Q9UNE0-2|EDAR 20.871210003555333 0.6025813472596342 3 {[DA]|[EG]}{I|L}SAA[VG]TV 10 -1 + 50.87 0.0 0.0 5.6367 5.6367 80.333 0.0 0.0 0.0 10.791812460476253 3.679767852945943 3.679767852945943 3.4691001300805624 0 1.0994850021680094 2.0 0.2742275032520141 0.0 {[DA]|[EG]}{I|L}SAA[VG]TV;{[DA]|[EG]}{I|L}GTA[VG]TV;{[DA]|[EG]}{I|L}SAA[VG]S{I|L};{[DA]|[EG]}{I|L}SA{[QV]|[N{I|L}]|[RA]|[KV]}TV;{[DA]|[EG]}{I|L}SAA[VG]{I|L}S;{[DA]|[EG]}{I|L}GTA[VG]S{I|L};{[DA]|[EG]}{I|L}GT{[QV]|[N{I|L}]|[RA]|[KV]}TV;{[DA]|[EG]}{I|L}G{I|L}{[QS]|[NT]}TV;{[DA]|[EG]}{I|L}SA{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{[DA]|[EG]}{I|L}[QT][VG]TV 5.6367;5.2523;5.2289;4.9129;4.8607;4.8445;4.5285;4.5285;4.5051;4.4953 -;-;-;-;-;-;-;-;-;- 531 + 1 1.447 106557.3 1.0 3862 5240 9085 HBL1_DMSO_200M_050219_1,9104 HBL1_DMSO_200M_050219_1,9104,FPLETPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9105 47.69 478.0 335830.0 25 0 32807.0 + -1 NTCYPCSYV 9 190 582.2283778068909 1162.4422026805817 2 582.2282592654228 MULTI CID FTMS 0 0 0 9085 294058.875 0.9514201511047732 -1 0.1577339172363281 20 2 Carbamidomethyl (C) _NTC(Carbamidomethyl (C))YPC(Carbamidomethyl (C))SYV_ REV__ENSG00000102935|ENST00000563137|ZNF423;REV__nc|ENSG00000102935|Q2M1K9-2|ZNF423;REV__nc|ENSG00000102935|Q2M1K9|ZNF423 15.847184025352805 0.4077185912009129 3 SA[PS]GNYV 8 -1 33.131 0.0 0.0 2.8501 0.0 0.0 369.0811634748063 0.0 369.0811634748063 0.0 18.526501428754862 0.0 0.0 0 1.337180496500464 0.0 0.5501648626366046 0.3807196863200844 SA[PS]GNYV 2.8501 - 1389 1 1.447 123278.4 1.0 3863 5240 9085 HBL1_DMSO_200M_050219_1,9105 HBL1_DMSO_200M_050219_1,9105,NTCYPCSYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9107 47.694 4.5 8126100.0 25 0 898520.0 + 41633 VPPPSAQEI 9 72 469.25301885211206 936.491484771024 2 469.2531616091728 MULTI CID FTMS 0 0 0 9106 11611023.0 1.0 0 0.0 1 Unmodified _VPPPSAQEI_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 21.74664581756881 0.2544899275067181 3 SPVQ{I|L}E 6 7 39.245 0.0 0.0 4.1907 0.0 0.0 265.14229018379064 0.0 265.14229018379064 0.0 23.76078152608656 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 SPVQ{I|L}E 4.1907 - 122 1 1.447 33827.8 1.0 3864 5241 9106 HBL1_DMSO_200M_050219_1,9107 HBL1_DMSO_200M_050219_1,9107,VPPPSAQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9108 47.695 18.0 2607100.0 25 0 184230.0 + -1 LFHMVICAF 9 70 569.2823740971244 1136.5501952610489 2 569.2825805544853 MULTI CID FTMS 0 0 0 9106 2916848.5 1.0 0 0.0 2 Carbamidomethyl (C) _LFHMVIC(Carbamidomethyl (C))AF_ REV__ENST00000337859.10_1_2:187368819-187368876:+|nuORF 36.46614268402704 0.0948557732959553 3 {I|L}{M(Oxidation (M))|F}HE[KC]{M(Oxidation (M))|F}{I|L} 8 -1 44.25 0.0 0.0 3.8934 0.0 0.0 0.0 116.05104242496328 116.05104242496328 6.396817769195216 0.0 0.0 0.0 0 0.7887254899964358 0.0 0.4247425010840047 0.0 {I|L}{M(Oxidation (M))|F}HE[KC]{M(Oxidation (M))|F}{I|L} 3.8934 - 149 + 1 1.447 42870.7 1.0 3865 5241 9106 HBL1_DMSO_200M_050219_1,9108 HBL1_DMSO_200M_050219_1,9108,LFHMVICAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9109 47.697 29.0 2842700.0 25 0 279070.0 -1 AYVHMVTHF 9 91 374.179807796016 0 374.1794921755791 PEAK CID FTMS 0 0 0 9106 1616902.0 1.0 0 0.0 3 Oxidation (M) _AYVHM(Oxidation (M))VTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 20.41453444215458 0.197313647343139 3 A 1 -1 6.9897 0.0 0.0 0.93652 0.0 0.0 540.2391341693774 132.04575525455314 672.2848894239305 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.93652 + + 16 + 1 1.447 72424.4 1.0 3866 5241 9106 HBL1_DMSO_200M_050219_1,9109 HBL1_DMSO_200M_050219_1,9109,AYVHMVTHF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9110 47.698 52.0 1053400.0 25 0 153880.0 + 12883 GVYGDVQRV 9 80 496.76161470175225 991.5086764703044 2 496.7617065310478 MULTI CID FTMS 0 0 0 9106 1217115.625 1.0 0 0.0 4 Unmodified _GVYGDVQRV_ ENSG00000011304|ENST00000356948|PTBP1;ENSG00000117569|ENST00000674951|PTBP2;ENST00000586944.5_1_19:807712-810823:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;nc|ENSG00000117569|Q9UKA9-2|PTBP2;nc|ENSG00000117569|Q9UKA9-3|PTBP2;nc|ENSG00000117569|Q9UKA9-4|PTBP2 38.17557092003332 0.0854718145212029 3 [VG]YGDVQRV 9 0 + 75.94 0.0 0.0 7.659 7.659 92.493 0.0 0.0 0.0 66.5030565586067 10.457574905606748 10.457574905606748 9.208187539523747 0 1.031234684152075 1.6989700043360187 0.0 0.3054621874040891 + + [VG]YGDVQRV;[VG]YGDV[AG]RV;[VG]YV[DG]QRV;[VG]VY[DG]QRV;[VG]Y[RD]QRV;[VG]YV[DG][AG]RV;[VG]VY[DG][AG]RV;[VG]Y[RD][AG]RV 7.659;6.7303;5.7679;5.5202;5.4182;4.8392;4.5915;4.484 +;-;-;-;-;-;-;- + 181 + 1 1.447 50593.5 1.0 3867 5241 9106 HBL1_DMSO_200M_050219_1,9110 HBL1_DMSO_200M_050219_1,9110,GVYGDVQRV True True GVYGDVQRV 47.698005 496.761706531048 6946642.0 9106.0 nc|ENSG00000117569|Q9UKA9-2|PTBP2;;ENSG00000011304|ENST00000356948|PTBP1;;nc|ENSG00000011304|P26599-1|PTBP1;;ENST00000586944.5_1_19:807712-810823:+|nuORF;;nc|ENSG00000117569|Q9UKA9-3|PTBP2;;nc|ENSG00000011304|P26599-2|PTBP1;;nc|ENSG00000117569|Q9UKA9-4|PTBP2;;ENSG00000117569|ENST00000674951|PTBP2 6.578912099202474 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9111 47.7 65.0 1190000.0 25 0 208460.0 + 36671 TAYPNRPMV 9 88 524.7659098951078 1047.5172668570156 2 524.7658569216728 MULTI CID FTMS 0 0 0 9106 969938.375 0.7738879017977581 1 -0.0892982482910156 5 Unmodified _TAYPNRPMV_ ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047-2|SETDB1;nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1 36.506200033944 0.094635877243972 3 [TA]YPN{I|L} 6 4 53.364 0.0 0.0 5.0943 0.0 0.0 0.0 385.17316614322505 385.17316614322505 41.66895006820745 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.0 0.75 [TA]YPN{I|L} 5.0943 - 91 + 1 1.447 66083.2 1.0 3868 5241 9106 HBL1_DMSO_200M_050219_1,9111 HBL1_DMSO_200M_050219_1,9111,TAYPNRPMV True True TAYPNRPMV 47.699582 524.765856921673 6931287.5 9106.0 nc|ENSG00000143379|Q15047-2|SETDB1;;nc|ENSG00000143379|Q15047-3|SETDB1;;ENSG00000143379|ENST00000692827|SETDB1;;nc|ENSG00000143379|Q15047|SETDB1 8.90371068318685 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9112 47.702 94.0 1904900.0 25 0 125600.0 + + -1 AFTQDTRSL 9 160 519.7635794249405 1037.512605916681 2 519.7642089724541 MULTI CID FTMS 0 0 0 9106 938818.3125 0.8913136354298804 -2 0.2174110412597656 6 Carbamidomethyl (C) _FAC(Carbamidomethyl (C))ALRLGM_ nc|ENSG00000257103|Q8ND56|LSM14A;ENSG00000257103|ENST00000544216|LSM14A 24.67388899826682 0.2172451872415813 3 TDQTEA 6 -1 48.613 0.0 0.0 4.6855 0.0 0.0 374.2278004376969 0.0 374.2278004376969 0.0 33.55008395258729 0.0 0.0 0 0.5649093276264391 0.0 0.0 0.3807196863200844 TDQTEA 4.6855 - 641 1 1.447 135213.5 1.0 3869 5241 9106 HBL1_DMSO_200M_050219_1,9112 HBL1_DMSO_200M_050219_1,9112,FACALRLGM False False AFTQDTRSL 47.701639 519.764208972454 6091058.5 9106.0 nc|ENSG00000257103|Q8ND56|LSM14A;;ENSG00000257103|ENST00000544216|LSM14A 5.033645788828532 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9113 47.703 51.0 1295500.0 25 0 69374.0 + -1 SIKDSFQKV 9 105 526.6872786088987 1051.3600042845974 2 526.6873657107353 MULTI CID FTMS 0 0 0 9106 801824.4375 0.7133671752781946 -1 0.0596771240234375 7 4 Oxidation (M) _SVCM(Oxidation (M))M(Oxidation (M))M(Oxidation (M))RM(Oxidation (M))_ nc|ENSG00000146757|Q03936-2|ZNF92;ENSG00000081665|ENST00000540806|ZNF506;nc|ENSG00000146757|Q03936-3|ZNF92;nc|ENSG00000081665|Q5JVG8-2|ZNF506;ENSG00000173041|ENST00000309683|ZNF680;ENSG00000146757|ENST00000328747|ZNF92;ENSG00000237440|ENST00000427401|ZNF737 5.230669730166228 0.792582437072536 3 V 1 -1 12.218 0.0 0.0 1.1622 0.0 0.0 934.28040483567 0.0 934.28040483567 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1622 + + 227 + 1 1.447 57428.4 1.0 3870 5241 9106 HBL1_DMSO_200M_050219_1,9113 HBL1_DMSO_200M_050219_1,9113,SVCMMMRM False False SIKDSFQKV 47.702991 526.687365710735 1175559.5 9106.0 nc|ENSG00000146757|Q03936-2|ZNF92;;ENSG00000081665|ENST00000540806|ZNF506;;nc|ENSG00000146757|Q03936-3|ZNF92;;nc|ENSG00000081665|Q5JVG8-2|ZNF506;;ENSG00000173041|ENST00000309683|ZNF680;;ENSG00000146757|ENST00000328747|ZNF92;;ENSG00000237440|ENST00000427401|ZNF737 0.0635051528612772 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9114 47.705 117.0 733150.0 25 0 87239.0 + 3229 AWPEQVRLS 9 105 543.2906565684075 1084.5667602036149 2 543.2905151247978 MULTI CID FTMS 0 0 0 9106 641261.0625 0.3089309307392415 12 -1.0578689575195312 8 Unmodified _AWPEQVRLS_ REV__ENSG00000140853|ENST00000688547|NLRC5;REV__ENST00000545081.5_1_16:57093337-57116437:+|nuORF;REV__nc|ENSG00000140853|Q86WI3-4|NLRC5;REV__nc|ENSG00000140853|Q86WI3-6|NLRC5 13.042465956692816 0.4836390050082244 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PER 5 -1 41.695 0.0 0.0 3.8444 0.0 0.0 0.0 442.2301424615844 442.2301424615844 23.534087492996388 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PER 3.8444 - 134 + 1 1.447 72380.4 1.0 3871 5241 9106 HBL1_DMSO_200M_050219_1,9114 HBL1_DMSO_200M_050219_1,9114,AWPEQVRLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9115 47.707 76.0 1307400.0 25 0 153770.0 + 35929 SVPEKIERI 9 98 357.54521387881323 1069.6138122366397 3 357.5448486208916 MULTI CID FTMS 0 0 0 9106 578176.9375 1.0 0 0.0 9 Unmodified _SVPEKIERI_ ENSG00000078177|ENST00000261435|N4BP2;nc|ENSG00000078177|Q86UW6-2|N4BP2 23.78978130925829 0.2284941198415988 3 [VS]PEK{I|L}E[R{I|L}] 9 0 + 61.405 0.0 0.0 5.7408 5.7408 82.359 0.0 0.0 0.0 50.80885228374251 3.2568864632742844 3.2568864632742844 4.771212547196626 0 0.3494850021680094 2.0 0.3807196863200844 0.0 + + [VS]PEK{I|L}E[R{I|L}];[VS]PE{I|L}KE[R{I|L}];[VS]P{I|L}EKE[R{I|L}];[VS]P{I|L}[SG]{I|L}E[R{I|L}];[VS]{I|L}PEKE[R{I|L}];[VS]{I|L}P[SG]{I|L}E[R{I|L}];[VS][VS][PA]{I|L}E[R{I|L}];[VS]WK{[QV]|[N{I|L}]|[RA]|[KV]}R[PA] 5.7408;5.2948;4.8487;4.4339;4.2113;3.7965;2.771;2.2534 +;-;-;-;-;-;-;- + 150 + 1 1.447 89018.9 1.0 3872 5241 9106 HBL1_DMSO_200M_050219_1,9115 HBL1_DMSO_200M_050219_1,9115,SVPEKIERI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9116 47.709 69.0 871260.0 25 0 69419.0 + 23759 LVAEPTLNL 9 89 485.2847712745433 968.5549896158866 2 485.2846557497978 MULTI CID FTMS 0 0 0 9106 561288.0 1.0 0 0.0 10 Unmodified _LVAEPTLNL_ REV__ENSG00000176381|ENST00000322583|PRR18 15.847184025352805 0.4077185912009129 3 [{I|L}V]{[CP]|[EA]}PK{M(Oxidation (M))|F} 7 -1 29.551 0.0 0.0 3.0511 0.0 0.0 0.0 181.0795617196553 181.0795617196553 16.45252403588071 0.0 0.0 0.0 0 0.5 2.0 0.3494850021680094 0.0 [{I|L}V]{[CP]|[EA]}PK{M(Oxidation (M))|F} 3.0511 - 176 1 1.447 53122.2 1.0 3873 5241 9106 HBL1_DMSO_200M_050219_1,9116 HBL1_DMSO_200M_050219_1,9116,LVAEPTLNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9117 47.712 158.0 592720.0 25 0 28878.0 11081 GEECDCGEPE 10 159 534.1695948708663 1066.3246368085324 2 534.1694213747978 MULTI CID FTMS 0 0 0 9106 563804.9375 1.0 0 0.0 11 Unmodified _GEECDCGEPE_ ENSG00000148848|ENST00000448723|ADAM12;nc|ENSG00000148848|O43184-2|ADAM12;nc|ENSG00000148848|O43184-3|ADAM12;nc|ENSG00000148848|O43184-4|ADAM12;nc|ENSG00000148848|O43184|ADAM12 6.2057823575117 0.6979311171683138 3 A[W{M(Oxidation (M))|F}][{I|L}P]SSM 8 10 16.289 0.0 0.0 1.5276 0.0 0.0 128.90320233763242 0.0 128.90320233763242 0.0 3.1900965061182625 0.0 0.0 0 0.0 0.0 1.406038390922711 0.0 A[W{M(Oxidation (M))|F}][{I|L}P]SSM 1.5276 - 686 + 1 1.447 74301.9 1.0 3874 5241 9106 HBL1_DMSO_200M_050219_1,9117 HBL1_DMSO_200M_050219_1,9117,GEECDCGEPE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9118 47.713 53.0 902160.0 25 0 85573.0 + 15677 IQQGETPGL 9 78 471.74837559713126 941.4821982610624 2 471.7476684451103 MULTI CID FTMS 0 0 0 9106 513715.8125 1.0 0 0.0 12 Unmodified _IQQGETPGL_ ENSG00000166478|ENST00000396602|ZNF143;ENST00000532305.1_1_11:9546777-9549157:+|nuORF;nc|ENSG00000166478|P52747-2|ZNF143;nc|ENSG00000166478|P52747-3|ZNF143 16.942295170755138 0.3780752226737986 3 [KT]YYTPG{I|L} 8 5 + 15.583 0.0 0.0 1.6552 1.6552 74.467 0.0 0.0 0.0 -0.9141570246463696 2.361578043116346 -0.9141570246463696 6.532125137753434 0 0.0 0.0 0.0 0.0 [KT]YYTPG{I|L};[KT]YYTPAV;{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}{[QG]|[NA]}PG{I|L} 1.6552;0.96138;0.48438 -;-;- 156 + 1 1.447 41742.5 1.0 3875 5241 9106 HBL1_DMSO_200M_050219_1,9118 HBL1_DMSO_200M_050219_1,9118,IQQGETPGL False True IQQGETPGL 47.713313 471.74766844511 2915073.5 9106.0 ENST00000532305.1_1_11:9546777-9549157:+|nuORF;;nc|ENSG00000166478|P52747-3|ZNF143;;nc|ENSG00000166478|P52747-2|ZNF143;;ENSG00000166478|ENST00000396602|ZNF143 -0.4648596948633591 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9119 47.717 177.0 489390.0 25 0 26709.0 + 30615 RFHTITTSY 9 128 563.2861835291175 1124.5578141250348 2 563.2848388552666 MULTI CID FTMS 0 0 0 9106 469866.5625 0.9383836706326508 -1 0.0596771240234375 13 Unmodified _RFHTITTSY_ ENSG00000084733|ENST00000264710|RAB10 60.07390631473393 0.0260411565414776 3 [YQ]{I|L}H{I|L}TTSY 9 4 + 70.466 0.0 0.0 6.2661 6.2661 87.396 0.0 0.0 0.0 8.676553115003358 13.46787486224656 8.676553115003358 8.676553115003358 0 1.1237125054200234 1.5228787452803376 1.3494850021680094 0.3494850021680094 [YQ]{I|L}H{I|L}TTSY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}H{I|L}TTSY;[Q{I|L}]YH{I|L}TTSY;[Q{I|L}][QA]T{I|L}TTSY;[PS][KQ]T{I|L}TTSY;[VP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}TTSY;[QA]STT{I|L}[RV]SY;{[ET]|[MV]}[{I|L}P]T{I|L}TTSY;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[KG]{I|L}TTSY;[QA]ST{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AKPY 6.2661;5.4945;4.7577;4.4351;4.4351;4.101;4.0358;3.995;3.9513;3.9242 -;-;-;-;-;-;-;-;-;- 1540 1 1.447 68697.6 1.0 3876 5241 9106 HBL1_DMSO_200M_050219_1,9119 HBL1_DMSO_200M_050219_1,9119,RFHTITTSY True True RFHTITTSY 47.716755 563.284838855267 4102356.25 9106.0 ENSG00000084733|ENST00000264710|RAB10 7.223475456237793 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9120 47.726 505.0 401710.0 25 0 19647.0 -1 0 100 714.1220706675417 3565.5739710047083 5 714.5241577029228 MULTI CID FTMS 0 0 0 9106 367661.34375 0.6735891665690505 -3 0.2815704345703125 14 3 YD[DV]ATYA 8 -1 18.875 0.0 0.0 0.52937 0.0 0.0 2359.055978916621 305.12482629947505 2664.180805216096 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 YD[DV]ATYA 0.52937 - 333 + 1 1.447 145059.0 1.0 3877 5241 9106 HBL1_DMSO_200M_050219_1,9120 HBL1_DMSO_200M_050219_1,9120, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9121 47.734 483.0 261210.0 25 0 14362.0 + 4061 DAMEEVRKV 9 140 538.7736422927254 0 538.7733032107353 PEAK CID FTMS 0 0 0 9106 330409.78125 1.0 0 0.0 15 Unmodified _DAMEEVRKV_ ENSG00000164187|ENST00000296603|LMBRD2 51.41523569358685 0.0277975921585534 3 AMEEVR 6 3 49.703 0.0 0.0 4.6212 0.0 0.0 115.02681748065945 242.1512392633422 357.17805674400165 0.0 0.0 0.0 0.0 0 1.6382104921644451 0.0 0.3807196863200844 0.4247425010840047 + AMEEVR 4.6212 + + 137 + 1 1.447 100572.0 1.0 3878 5241 9106 HBL1_DMSO_200M_050219_1,9121 HBL1_DMSO_200M_050219_1,9121,DAMEEVRKV True True DAMEEVRKV 47.734222 538.773303210735 1089118.875 9106.0 ENSG00000164187|ENST00000296603|LMBRD2 6.785182476043701 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9122 47.744 564.0 373750.0 25 0 14467.0 + 33983 SLIKKIKDV 9 230 522.3442398905161 1042.673926847832 2 522.3449584841728 MULTI CID FTMS 0 0 0 9106 244375.859375 1.0 0 0.0 16 Unmodified _SLIKKIKDV_ ENSG00000005020|ENST00000345317|SKAP2;ENST00000468712.5_1_7:26766479-26894483:-|nuORF;ENST00000487720.1_1_7:26887667-26904048:-|nuORF;ENST00000497511.5_1_7:26786288-26904048:-|nuORF 37.77132515983256 0.0876909340306915 3 VT{I|L}KK{I|L}KDV 9 2 + 69.95 0.0 0.0 6.7087 6.7087 91.344 0.0 0.0 0.0 46.03209318187706 7.892587542690919 7.892587542690919 11.237125054200234 0 1.579689690656103 1.6989700043360187 0.4247425010840047 0.0 VT{I|L}KK{I|L}KDV;S{I|L}{I|L}KK{I|L}KDV;VT{I|L}KK{I|L}[QT]{I|L};VT{I|L}KK{I|L}AATV;VT{I|L}KK{I|L}[{I|L}T]Q;VT{I|L}KK{I|L}AAS{I|L};VT{I|L}KK[WR]{I|L};VT{I|L}KK[RV]TV;S{I|L}{I|L}KK{I|L}[QT]{I|L};VT{I|L}KK[RV]S{I|L} 6.7087;5.631;5.5074;5.2298;5.1348;5.0303;4.8397;4.5568;4.4297;4.3573 -;+;-;-;-;-;-;-;-;- + 1599 + 1 1.447 163032.1 1.0 3879 5241 9106 HBL1_DMSO_200M_050219_1,9122 HBL1_DMSO_200M_050219_1,9122,SLIKKIKDV True True SLIKKIKDV 47.744128 522.344958484173 1067552.5 9106.0 ENST00000487720.1_1_7:26887667-26904048:-|nuORF;;ENST00000497511.5_1_7:26786288-26904048:-|nuORF;;ENSG00000005020|ENST00000345317|SKAP2;;ENST00000468712.5_1_7:26766479-26894483:-|nuORF 5.552047570546468 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9123 47.748 226.0 240880.0 25 0 26916.0 27787 PLPPPPPPP 9 85 454.76589776731225 0 454.7654601931572 PEAK CID FTMS 0 0 0 9106 214777.921875 0.7042712309095528 4 -0.3095664978027344 17 Unmodified _PLPPPPPPP_ ENSG00000009694|ENST00000371130|TENM1;ENSG00000100312|ENST00000216139|ACR;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000117560|ENST00000367721|FASLG;ENSG00000124496|ENST00000695948|TRERF1;ENSG00000126460|ENST00000246794|PRRG2;ENSG00000132510|ENST00000448097|KDM6B;ENSG00000138771|ENST00000296043|SHROOM3;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000141456|ENST00000572293|PELP1;ENSG00000146083|ENST00000274811|RNF44;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000160685|ENST00000535420|ZBTB7B;ENSG00000170234|ENST00000307063|PWWP2A;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000175073|ENST00000310421|VCPIP1;ENSG00000175785|ENST00000393140|PRIMA1;ENSG00000176182|ENST00000322217|MYPOP;ENSG00000188779|ENST00000380035|SKOR1;ENSG00000204334|ENST00000697325|ERICH2;ENSG00000248905|ENST00000616417|FMN1;ENSG00000259956|ENST00000563281|RBM15B;ENST00000361272.8_2_8:17102747-17104366:-|nuORF;ENST00000379565.7_1_X:20227482-20284914:-|nuORF;ENST00000508096.1_1_10:126605730-126631034:+|nuORF;ENST00000508478.1_1_5:175957081-175957609:-|nuORF;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENST00000596700.5_1_19:50084718-50093643:+|nuORF;ENST00000597121.5_1_19:50086773-50093643:+|nuORF;nc|ENSG00000009694|Q9UKZ4-2|TENM1;nc|ENSG00000110076|P58401|NRXN2;nc|ENSG00000117560|P48023-2|FASLG;nc|ENSG00000124496|Q96PN7|TRERF1;nc|ENSG00000132510|O15054-1|KDM6B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000146083|Q7L0R7-2|RNF44;nc|ENSG00000160685|O15156-2|ZBTB7B;nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170234|Q96N64-2|PWWP2A;nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000175785|Q86XR5-2|PRIMA1;nc|ENSG00000188779|P84550-3|SKOR1;nc|ENSG00000248905|Q68DA7-5|FMN1;REV__ENSG00000048991|ENST00000683871|R3HDM1;REV__ENSG00000066855|ENST00000262146|MTFR1;REV__ENSG00000068489|ENST00000262293|PRR11;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000100592|ENST00000360909|DAAM1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000119596|ENST00000325680|YLPM1;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000125740|ENST00000353609|FOSB;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__ENSG00000132510|ENST00000448097|KDM6B;REV__ENSG00000135250|ENST00000393651|SRPK2;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138081|ENST00000403359|FBXO11;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__ENSG00000141431|ENST00000269197|ASXL3;REV__ENSG00000145414|ENST00000274054|NAF1;REV__ENSG00000146122|ENST00000274867|DAAM2;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152409|ENST00000396137|JMY;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000157827|ENST00000288670|FMNL2;REV__ENSG00000162775|ENST00000369784|RBM15;REV__ENSG00000164916|ENST00000328914|FOXK1;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000173166|ENST00000319170|RAPH1;REV__ENSG00000173917|ENST00000330070|HOXB2;REV__ENSG00000175073|ENST00000310421|VCPIP1;REV__ENSG00000176624|ENST00000406189|MEX3C;REV__ENSG00000186472|ENST00000333891|PCLO;REV__ENSG00000187017|ENST00000645284|ESPN;REV__ENSG00000187164|ENST00000355371|SHTN1;REV__ENSG00000203485|ENST00000392634|INF2;REV__ENSG00000215045|ENST00000457091|GRID2IP;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000274209|ENST00000620264|ANTXRL;REV__ENST00000324225.8_1_11:117049861-117050083:+|nuORF;REV__ENST00000358635.7_1_4:140005384-140005639:-|nuORF;REV__ENST00000368219.1_1_1:156698226-156698472:-|nuORF;REV__ENST00000379565.7_1_X:20227482-20284914:-|nuORF;REV__ENST00000424808.6_1_8:66582187-66620357:+|nuORF;REV__ENST00000471339.1_1_5:173036657-173043649:-|nuORF;REV__ENST00000519935.1_1_7:27209203-27211037:+|nuORF;REV__ENST00000587358.1_1_19:45974364-45976267:+|nuORF;REV__nc|ENSG00000048991|Q15032-2|R3HDM1;REV__nc|ENSG00000048991|Q15032-3|R3HDM1;REV__nc|ENSG00000048991|Q15032-4|R3HDM1;REV__nc|ENSG00000048991|Q15032|R3HDM1;REV__nc|ENSG00000066855|Q15390-2|MTFR1;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100592|Q9Y4D1-3|DAAM1;REV__nc|ENSG00000100592|Q9Y4D1|DAAM1;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000119596|P49750-1|YLPM1;REV__nc|ENSG00000119596|P49750-3|YLPM1;REV__nc|ENSG00000125740|P53539-10|FOSB;REV__nc|ENSG00000125740|P53539-2|FOSB;REV__nc|ENSG00000125740|P53539-3|FOSB;REV__nc|ENSG00000125740|P53539-5|FOSB;REV__nc|ENSG00000125740|P53539-8|FOSB;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1;REV__nc|ENSG00000132510|O15054-1|KDM6B;REV__nc|ENSG00000135250|P78362|SRPK2;REV__nc|ENSG00000138081|Q86XK2-4|FBXO11;REV__nc|ENSG00000138081|Q86XK2-5|FBXO11;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3;REV__nc|ENSG00000140836|Q15911-2|ZFHX3;REV__nc|ENSG00000146122|Q86T65-4|DAAM2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000157827|Q96PY5|FMNL2;REV__nc|ENSG00000162775|Q96T37-2|RBM15;REV__nc|ENSG00000162775|Q96T37-3|RBM15;REV__nc|ENSG00000162775|Q96T37-4|RBM15;REV__nc|ENSG00000170004|Q12873-3|CHD3;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__nc|ENSG00000187017|B1AK53-2|ESPN;REV__nc|ENSG00000187164|A0MZ66-2|SHTN1;REV__nc|ENSG00000187164|A0MZ66-3|SHTN1;REV__nc|ENSG00000187164|A0MZ66-4|SHTN1;REV__nc|ENSG00000187164|A0MZ66-5|SHTN1;REV__nc|ENSG00000187164|A0MZ66-6|SHTN1;REV__nc|ENSG00000187164|A0MZ66-8|SHTN1;REV__nc|ENSG00000203485|Q27J81-2|INF2;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__PCLO|p.V3720Sfs*2|1|0.13|ENSG00000186472|chr7:82916828-82916829|-/T|frameshift_variant 45.7499826716795 0.043292906891918 3 PP 2 7 15.991 0.0 0.0 1.7621 0.0 0.0 501.29469118716514 209.0936220758422 710.3883132630074 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + PP 1.7621 + + 30 + 1 1.447 48265.3 1.0 3880 5241 9106 HBL1_DMSO_200M_050219_1,9123 HBL1_DMSO_200M_050219_1,9123,PLPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9124 47.753 270.0 223980.0 25 0 53336.0 -1 0 81 492.2616014070764 1965.0172997619056 4 492.2627746462822 MULTI CID FTMS 0 0 0 9106 221834.75 0.542386567155056 -9 0.704315185546875 18 3 {I|L} 1 -1 11.594 0.0 0.0 0.59001 0.0 0.0 1833.9220982011616 0.0 1833.9220982011616 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.59001 - 33 + 1 1.447 49889.2 1.0 3881 5241 9106 HBL1_DMSO_200M_050219_1,9124 HBL1_DMSO_200M_050219_1,9124, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9125 47.766 632.0 75458.0 25 0 4727.8 36134 SVTLSTESPKE 11 86 589.3008452400047 1176.5871375468091 2 589.3017455935478 MULTI CID FTMS 0 0 0 9106 150633.453125 0.5851640941124141 -2 0.2174110412597656 19 Unmodified _SVTLSTESPKE_ ENSG00000154175|ENST00000471714|ABI3BP;nc|ENSG00000154175|Q7Z7G0-3|ABI3BP 5.731851221503515 0.8481046878870278 3 [VS]AA{[DA]|[EG]}{I|L}N 8 8 11.215 0.0 0.0 0.95316 0.0 0.0 0.0 432.1961212716719 432.1961212716719 1.53707199112252 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VS]AA{[DA]|[EG]}{I|L}N 0.95316 - 153 1 1.447 43949.8 1.0 3882 5241 9106 HBL1_DMSO_200M_050219_1,9125 HBL1_DMSO_200M_050219_1,9125,SVTLSTESPKE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9126 47.779 800.0 324720.0 25 0 38652.0 4275 DAQRLAAV 8 212 422.23784738706456 842.4611418409291 2 422.2378417849541 MULTI CID FTMS 0 0 0 9106 134579.96875 0.0630811767234247 3 -0.2606277465820312 20 Unmodified _DAQRLAAV_ ENSG00000117597|ENST00000491415|UTP25 24.67388899826682 0.525179942228231 3 {I|L}AGV 4 5 35.349 0.0 0.0 4.196 0.0 0.0 484.2400685041032 0.0 484.2400685041032 0.0 9.931153458833393 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {I|L}AGV 4.196 - 677 1 1.447 198436.9 0.8500000238418579 3883 5241 9106 HBL1_DMSO_200M_050219_1,9126 HBL1_DMSO_200M_050219_1,9126,DAQRLAAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9128 47.784 49.0 1096700.0 25 0 132190.0 + 28632 PVHCLMFL 8 68 480.24402358252 958.47349423184 2 480.2439758181572 MULTI CID FTMS 0 0 0 9127 521530.0 0.8849134644925036 1 -0.0397987365722656 1 Unmodified _PVHCLMFL_ REV__ENSG00000174669|ENST00000357440|SLC29A2 17.086550045450526 0.6584923310065985 3 VPPW 4 -1 54.68 0.0 0.0 5.705 0.0 0.0 0.0 476.21482263736567 476.21482263736567 42.2062251842808 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VPPW 5.705 - 20 + 1 1.447 49600.4 1.0 3884 5242 9127 HBL1_DMSO_200M_050219_1,9128 HBL1_DMSO_200M_050219_1,9128,PVHCLMFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9129 47.793 523.0 733000.0 25 0 73840.0 + 20802 LLVVYPWTQR 10 127 637.8665930279752 1273.7186331227504 2 637.8669311404228 MULTI CID FTMS 0 0 0 9127 256889.578125 0.1500951954880804 3 -0.2202682495117187 2 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 110.5527297667825 0.0023234913804031 3 {I|L}{I|L}VVYPWTQR 10 0 + 117.78 0.0 0.0 9.2471 9.2471 91.806 0.0 0.0 0.0 33.52182518111363 6.53212513775344 6.53212513775344 6.53212513775344 0 1.7134679910804405 1.6989700043360187 1.110924374808178 1.548455006504028 + + {I|L}{I|L}VVYPWTQR;{I|L}{I|L}VVYPWTRQ;{I|L}{I|L}VVYPWT[AG]R;{I|L}{I|L}VVYPWSAAR;{I|L}{I|L}VVYPDV[QT]K;{I|L}{I|L}VVYPW{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K;{I|L}{I|L}VVYPDV[KT]Q;{I|L}{I|L}VVYPD{I|L}{[QS]|[NT]}K;{I|L}{I|L}VVYPD{I|L}[KS]Q;{I|L}{I|L}VVYP{[CP]|[EA]}[KS]R 9.2471;8.7343;8.5276;8.4874;8.3745;8.3098;8.2721;7.9999;7.8976;7.6473 +;-;-;-;-;-;-;-;-;- + 2454 + 1 1.447 284733.0 1.0 3885 5242 9127 HBL1_DMSO_200M_050219_1,9129 HBL1_DMSO_200M_050219_1,9129,LLVVYPWTQR True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 9130 47.794 61.0 769610.0 25 0 65565.0 + 41394 VPLARRQPL 9 74 350.5577878388968 1048.6515341168902 3 350.5571777224541 MULTI CID FTMS 0 0 0 9127 363010.625 1.0 0 0.0 3 Unmodified _VPLARRQPL_ REV__ENST00000472410.5_1_1:27687327-27687848:-|nuORF 4.189502756095605 0.7684307469601125 3 VVP 3 -1 26.198 0.0 0.0 2.4982 0.0 0.0 0.0 750.4394573351367 750.4394573351367 15.819284013193348 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VVP 2.4982 - 26 + 1 1.447 49344.7 1.0 3886 5242 9127 HBL1_DMSO_200M_050219_1,9130 HBL1_DMSO_200M_050219_1,9130,VPLARRQPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9131 47.805 620.0 373410.0 25 0 98710.0 + 12766 GVPGSVASV 9 99 772.4198005042263 771.4125240376262 1 772.4203979372978 MULTI CID FTMS 0 0 0 9127 278289.375 0.5827865138303211 -4 0.3708686828613281 4 Unmodified _GVPGSVASV_ ENSG00000141873|ENST00000269740|SLC39A3 92.8221339359638 0.0138398038803217 3 [PG]SVGVASV 9 4 + 73.552 0.0 0.0 9.5347 9.5347 91.628 0.0 0.0 0.0 4.7620364415941765 39.22295873128064 4.7620364415941765 6.206290716515909 0 0.8391368308784531 0.0 2.309894379144197 0.0 [PG]SVGVASV;[PG]SVGVTGV;[PG]SVAGVSV;[PG]SVASVGV;[PG]SVGAVSV;[PG]SVGTVGV;[PG]SGVVASV;[PG]VSGVASV;[VS][PG]GVASV;[PG]SVASGVV 9.5347;8.7302;8.4378;8.1211;8.0202;7.7034;7.6341;7.5851;7.5519;7.1637 -;-;-;-;-;-;-;-;-;- 2373 1 1.447 162560.0 1.0 3887 5242 9127 HBL1_DMSO_200M_050219_1,9131 HBL1_DMSO_200M_050219_1,9131,GVPGSVASV True True GVPGSVASV 47.805173 772.420397937298 10169394.0 9127.0 ENSG00000141873|ENST00000269740|SLC39A3 5.362320899963379 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9132 47.819 800.0 439670.0 25 0 41101.0 -1 0 145 1037.974445800579 2073.934338667958 2 1038.475390613079 MULTI CID FTMS 0 0 0 9127 142668.25 0.1395920597786577 18 -1.7555465698242188 5 3 S{M(Oxidation (M))|F}GD{I|L}ST[DP]AV{M(Oxidation (M))|F}GNPK 16 -1 69.1 0.0 0.0 3.3318 0.0 0.0 423.1674452126829 0.0 423.1674452126829 0.0 29.94698750222399 0.0 0.0 0 1.4802046884880935 0.0 0.0 0.4916440611282626 S{M(Oxidation (M))|F}GD{I|L}ST[DP]AV{M(Oxidation (M))|F}GNPK 3.3318 - 24888 + 1 1.447 225311.5 0.8100000023841858 3888 5242 9127 HBL1_DMSO_200M_050219_1,9132 HBL1_DMSO_200M_050219_1,9132, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9134 47.825 91.0 700050.0 25 0 78404.0 + 43661 YARPSSEVI 9 84 511.2693515829526 1020.5241502327052 2 511.2696716189384 MULTI CID FTMS 0 0 0 9133 675339.625 0.2185186964812481 2 -0.1804695129394531 1 Unmodified _YARPSSEVI_ ENSG00000066044|ENST00000407627|ELAVL1;nc|ENSG00000066044|Q15717-2|ELAVL1 30.63653989081413 0.1413794767160703 3 {[TV]|[{I|L}S]}{[DA]|[EG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EV{I|L} 9 6 + 49.9 0.0 0.0 4.8896 4.8896 82.721 0.0 0.0 0.0 11.438937347570077 39.52103077432806 11.438937347570077 8.57840941039747 0 0.8494850021680094 1.6989700043360187 0.7302046884880937 0.0 {[TV]|[{I|L}S]}{[DA]|[EG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EV{I|L};{[TV]|[{I|L}S]}{[DA]|[EG]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}V{I|L};{[QN]|[E{I|L}]|[KN]}[SG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EV{I|L};{[QN]|[E{I|L}]|[KN]}[SG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}V{I|L};[{I|L}T][DG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EV{I|L};{[ES]|[DT]|[{I|L}C]}{[VA]|[{I|L}G]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EV{I|L};{[ES]|[DT]|[{I|L}C]}R[RD]{M(Oxidation (M))|F}V{I|L};[{I|L}T][DG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}V{I|L};{[ES]|[DT]|[{I|L}C]}{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}V{I|L} 4.8896;4.049;3.7665;2.9259;2.6349;2.4623;2.3568;1.7943;1.6217 -;-;-;-;-;-;-;-;- 277 1 1.466 55400.0 1.0 3889 5243 9133 HBL1_DMSO_200M_050219_1,9134 HBL1_DMSO_200M_050219_1,9134,YARPSSEVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9135 47.826 65.0 1007100.0 25 0 67329.0 + 36085 SVQRSFTQV 9 103 526.2802715686292 1050.5459902040584 2 526.2805663943291 MULTI CID FTMS 0 0 0 9133 570997.9375 1.0 0 0.0 2 Unmodified _SVQRSFTQV_ ENSG00000198911|ENST00000361204|SREBF2;nc|ENSG00000198911|Q12772-2|SREBF2 55.50274090549119 0.0285720310785888 3 TQV 3 6 36.484 0.0 0.0 3.4729 0.0 0.0 704.3598172679075 0.0 704.3598172679075 0.0 12.059771852360797 0.0 0.0 0 0.9049471895720984 0.0 0.4247425010840047 0.0 + TQV 3.4729 + + 308 1 1.466 56030.5 1.0 3890 5243 9133 HBL1_DMSO_200M_050219_1,9135 HBL1_DMSO_200M_050219_1,9135,SVQRSFTQV True True SVQRSFTQV 47.826163 526.280566394329 3327297.0 9133.0 nc|ENSG00000198911|Q12772-2|SREBF2;;ENSG00000198911|ENST00000361204|SREBF2 5.377859274546306 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9136 47.828 98.0 1216000.0 25 0 108870.0 + 12940 HAFKISKI 8 140 315.1957601528542 942.5654510587626 3 315.1953613162041 MULTI CID FTMS 0 0 0 9133 557950.5 0.0253678713140122 -3 0.1887741088867187 3 Unmodified _HAFKISKI_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4 25.399314129420983 0.5099049743284904 3 [HA]{M(Oxidation (M))|F}K 4 4 24.385 0.0 0.0 2.5871 0.0 0.0 0.0 456.2831689144845 456.2831689144845 8.548019772659243 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.0 0.0 + [HA]{M(Oxidation (M))|F}K 2.5871 + + 95 1 1.466 98577.2 1.0 3891 5243 9133 HBL1_DMSO_200M_050219_1,9136 HBL1_DMSO_200M_050219_1,9136,HAFKISKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9137 47.831 107.0 960670.0 25 0 267430.0 -1 0 88 360.1947643142523 359.18748784765233 1 360.1953002810478 MULTI CID FTMS 0 0 0 9133 580580.5 0.3861678940596673 5 -0.4228363037109375 4 3 MP{I|L} 3 -1 + 48.544 0.0 0.0 13.515 13.515 98.864 0.0 0.0 0.0 31.09652914033546 11.00329725273209 11.00329725273209 29.970186830927915 0 0.3807196863200844 1.6989700043360187 0.0 0.0 MP{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L} 13.515;5.171 -;- 12 + 1 1.466 90748.9 1.0 3892 5243 9133 HBL1_DMSO_200M_050219_1,9137 HBL1_DMSO_200M_050219_1,9137, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9138 47.839 495.0 257130.0 25 0 30809.0 -1 CRPFEESGTCK 11 117 657.2831645978308 1312.5517762624615 2 657.2831298708916 MULTI CID FTMS 0 0 0 9133 350042.6875 0.2166161368005428 3 -0.2498703002929687 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))RPFEESGTCK_ ENSG00000152518|ENST00000282388|ZFP36L2 10.799506525563784 0.8105043987015127 3 VSSVTE{I|L} 7 -1 41.675 0.0 0.0 3.1751 0.0 0.0 221.08989147393143 373.0641878717407 594.1540793456721 0.0 0.0 0.0 0.0 0 0.0 0.0 1.5 0.0 VSSVTE{I|L} 3.1751 - 1419 + 1 1.466 96693.0 1.0 3893 5243 9133 HBL1_DMSO_200M_050219_1,9138 HBL1_DMSO_200M_050219_1,9138,CRPFEESGTCK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9139 47.842 118.0 447770.0 25 0 31615.0 -1 VFMHVSTAY 9 102 535.7528093153235 1069.4910656974469 2 535.7516357302666 MULTI CID FTMS 0 0 0 9133 231750.21875 0.6843771859721266 -1 0.0397987365722656 6 Oxidation (M) _VFM(Oxidation (M))HVSTAY_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 19.438996006549623 0.310492472477042 3 [QA]A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}TAY 10 -1 + 20.067 0.0 0.0 1.8763 1.8763 71.325 0.0 0.0 0.0 1.0256843593644014 7.848265625289841 1.0256843593644014 3.5218251811136234 0 0.3182503180159344 0.0 0.5 0.0 [QA]A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}TAY;[QA]A[W{M(Oxidation (M))|F}]{I|L}TAY;[QA][PG]SY[{I|L}T]AY;[C(Carbamidomethyl (C))K][WE]{I|L}TAY;[C(Carbamidomethyl (C))K][{M(Oxidation (M))|F}V]{[DA]|[EG]}PAY;[QA]A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[YT]A{I|L};[QA][PG]SY[YT]A{I|L} 1.8763;1.547;1.3927;1.0367;0.89873;0.28819;0.10215 -;-;-;-;-;-;- 151 + 1 1.466 46929.2 1.0 3894 5243 9133 HBL1_DMSO_200M_050219_1,9139 HBL1_DMSO_200M_050219_1,9139,VFMHVSTAY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9140 47.852 568.0 302650.0 25 0 15367.0 + -1 SQWDSPMRV 9 188 560.7628736796089 1119.5111944260177 2 560.7656127810478 MULTI CID FTMS 0 0 0 9133 218895.5625 0.5284107638114873 2 -0.1804695129394531 7 Carbamidomethyl (C) _SFVHRDC(Carbamidomethyl (C))IS_ ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B 21.53697664764585 0.2571576504437394 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}VTH{M(Oxidation (M))|F} 9 -1 + 68.272 0.0 0.0 6.0983 6.0983 83.968 0.0 0.0 0.0 19.535372259137908 5.228787452803374 5.228787452803374 5.228787452803374 0 1.5356668758921828 2.0 0.2614393726401688 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}VTH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}VT{M(Oxidation (M))|F}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YYGVTH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YYRTH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YYGVT{M(Oxidation (M))|F}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YYRT{M(Oxidation (M))|F}H;YYAYGVTH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}VT{[{M(Oxidation (M))|F}H]|[RQ]};YYAYRTH{M(Oxidation (M))|F};YYAYGVT{M(Oxidation (M))|F}H 6.0983;5.6313;5.0484;4.8708;4.5814;4.4038;4.3534;4.2571;4.1757;3.8863 -;-;-;-;-;-;-;-;-;- 4137 + 1 1.466 130242.3 1.0 3895 5243 9133 HBL1_DMSO_200M_050219_1,9140 HBL1_DMSO_200M_050219_1,9140,SFVHRDCIS False False SQWDSPMRV 47.851734 560.765612781048 826851.875 9133.0 ENSG00000132549|ENST00000357162|VPS13B;;nc|ENSG00000132549|Q7Z7G8|VPS13B;;nc|ENSG00000132549|Q7Z7G8-6|VPS13B 6.11338996887207 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9141 47.862 615.0 281810.0 25 0 25253.0 1135 AGTPVPSAHLD 11 189 532.7705754074816 1063.526597881763 2 532.7747680544853 MULTI CID FTMS 0 0 0 9133 195341.859375 0.3602621888061864 5 -0.4228363037109375 8 Unmodified _AGTPVPSAHLD_ ENSG00000038358|ENST00000358933|EDC4;ENST00000572067.1_1_16:67916768-67917086:+|nuORF;nc|ENSG00000038358|Q6P2E9-2|EDC4 8.155526934196011 0.8366696279279818 3 [QT]PATVV{I|L} 8 8 22.432 0.0 0.0 2.1092 0.0 0.0 0.0 251.02663044089527 251.02663044089527 6.228970117210029 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4361818737241735 0.0 [QT]PATVV{I|L} 2.1092 - 1032 1 1.466 134952.9 1.0 3896 5243 9133 HBL1_DMSO_200M_050219_1,9141 HBL1_DMSO_200M_050219_1,9141,AGTPVPSAHLD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9142 47.876 770.0 269660.0 25 0 35921.0 + 21873 LPPESTQV 8 209 435.73190224853386 869.4492515638677 2 435.7321349978447 MULTI CID FTMS 0 0 0 9133 163243.890625 0.3109021033576303 19 -1.898136138916016 9 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 49.66892048692302 0.1408045912742846 3 [{I|L}P]PESTQV 8 0 + 31.441 0.0 0.0 3.6162 3.6162 81.009 0.0 0.0 0.0 9.54119982655925 6.167053245199625 6.167053245199625 9.54119982655925 0 0.4111530855033565 1.5228787452803376 0.9247425010840048 0.0 + + [{I|L}P]PESTQV;[EP]PS{I|L}TQV;[EP]P{I|L}STQV;{[HG]|PP}ES{I|L}TQV;{[HG]|PP}E{I|L}STQV;[EP]SP{I|L}TQV;[{I|L}P]P[WM]QV;{[HG]|PP}{I|L}ESTQV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}HHHV;[EP]V[TP]TQV 3.6162;2.5188;2.375;2.0956;1.9518;1.6238;1.4488;1.1478;0.85849;0.42091 +;-;-;-;-;-;-;-;-;- + 529 1 1.466 163234.3 1.0 3897 5243 9133 HBL1_DMSO_200M_050219_1,9142 HBL1_DMSO_200M_050219_1,9142,LPPESTQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9143 47.89 800.0 100880.0 25 0 6007.9 -1 0 61 892.6522839995632 3566.5800301318527 4 892.9019042849541 MULTI CID FTMS 0 0 0 9133 145591.890625 1.0 0 0.0 10 3 VD 2 -1 25.217 0.0 0.0 0.70702 0.0 0.0 0.0 3349.512932834907 3349.512932834907 15.039237471316296 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 VD 0.70702 - 38 + 1 1.466 60125.1 0.959999978542328 3898 5243 9133 HBL1_DMSO_200M_050219_1,9143 HBL1_DMSO_200M_050219_1,9143, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9144 47.901 671.0 138080.0 25 0 15173.0 + 32339 RYPDAKMDPM 10 93 612.2808484992878 1222.5471440653755 2 612.3058959841728 MULTI CID FTMS 0 0 0 9133 77898.3984375 0.8639916503583215 -1 0.0397987365722656 11 Unmodified _RYPDAKMDPM_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 47.7319792270244 0.0934623409360514 3 [DP][YR]AKMDPM 10 4 + 76.164 0.0 0.0 6.2299 6.2299 87.094 0.0 0.0 0.0 8.410739228505292 15.183914130944878 8.410739228505292 8.410739228505292 0 1.6237125054200234 1.2218487496163564 0.805462187404089 0.4247425010840047 [DP][YR]AKMDPM;[{M(Oxidation (M))|F}V]D{[VA]|[{I|L}G]}AKMDPM;[{M(Oxidation (M))|F}V]{[RE]|[WV]}AKMDPM;[YR][DP]AKMDPM;[DP]N[Y{I|L}]KMDPM;[{M(Oxidation (M))|F}V]DMKA{[VA]|[{I|L}G]}DPM;[TP][W{M(Oxidation (M))|F}]AKMDPM;[{M(Oxidation (M))|F}V]DMKA{[RE]|[WV]}PM;[{I|L}T][WM]AKMDPM;[{M(Oxidation (M))|F}V]D[Q{I|L}]KMDPM 6.2299;5.542;5.3932;5.0217;4.9998;4.9879;4.9504;4.8392;4.7958;4.6567 -;-;-;+;-;-;-;-;-;- + 462 1 1.466 74804.2 1.0 3899 5243 9133 HBL1_DMSO_200M_050219_1,9144 HBL1_DMSO_200M_050219_1,9144,RYPDAKMDPM True True RYPDAKMDPM 47.901329 611.9719 1046000.625 9133.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 7.028766791025798 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9145 47.917 800.0 189900.0 25 0 15562.0 27442 PISTTNWLFDL 11 132 653.83516383882 1305.65577474444 2 654.3372070193291 MULTI CID FTMS 0 0 0 9133 120478.3984375 0.1986014605800202 -5 0.4106674194335937 12 Unmodified _PISTTNWLFDL_ ENST00000373728.6_1_9:125048175-125048441:+|nuORF 13.042465956692816 0.7638483625850725 3 [VP]TSPV 6 9 37.673 0.0 0.0 2.8854 0.0 0.0 0.0 722.3106710614749 722.3106710614749 18.270951076690988 0.0 0.0 0.0 0 0.0 0.721246399047171 1.350576203518622 0.0 [VP]TSPV 2.8854 - 688 1 1.466 114377.0 0.9399999976158142 3900 5243 9133 HBL1_DMSO_200M_050219_1,9145 HBL1_DMSO_200M_050219_1,9145,PISTTNWLFDL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9146 47.93 800.0 130650.0 25 0 9722.9 + + -1 KQIESDRQNLL 11 124 672.3702880740166 0 672.3702880740166 PEAK CID FTMS 0 0 0 -1 0 13 Carbamidomethyl (C) _KQIEPLIVC(Carbamidomethyl (C))FP_ ENSG00000134690|ENST00000373055|CDCA8 51.629811660486645 0.0413039049442591 3 Q{I|L}E 3 -1 41.649 0.0 0.0 3.1018 0.0 0.0 128.09781508408747 841.4187522418282 969.5165673259156 0.0 0.0 0.0 0.0 0 1.445629013946523 0.0 0.75 0.3494850021680094 Q{I|L}E 3.1018 + + 240 + 1 1.466 84859.5 0.9100000262260436 3901 5243 9133 HBL1_DMSO_200M_050219_1,9146 HBL1_DMSO_200M_050219_1,9146,KQIEPLIVCFP False False KQIESDRQNLL 47.93045 672.370288074017 675515.0625 9133.0 ENSG00000134690|ENST00000373055|CDCA8 4.808585643768311 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9147 47.945 800.0 315910.0 25 0 28054.0 + -1 PENVSTHV 8 218 441.6969470943609 881.3793412555218 2 441.6977722048759 MULTI CID FTMS 0 0 0 9133 114702.25 1.0 0 0.0 14 Carbamidomethyl (C) _VAGTMMC(Carbamidomethyl (C))L_ ENSG00000138160|ENST00000260731|KIF11;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 14.581692164780916 0.6954967302934248 3 VA 2 -1 29.807 0.0 0.0 3.3819 0.0 0.0 0.0 708.2525289036206 708.2525289036206 7.755762612236907 0.0 0.0 0.0 0 0.3609243748081782 0.5228787452803376 0.0 0.0 VA 3.3819 + + 1326 + 1 1.466 193526.6 0.7699999809265137 3902 5243 9133 HBL1_DMSO_200M_050219_1,9147 HBL1_DMSO_200M_050219_1,9147,VAGTMMCL False False PENVSTHV 47.945439 441.697772204876 231570.796875 9133.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 4.268228848775228 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9148 47.951 275.0 313920.0 25 0 35012.0 + 39390 VAKKTDAV 8 118 416.2491936048219 0 416.2495605349541 PEAK CID FTMS 0 0 0 9133 116411.765625 0.0628850153104674 -4 0.3465080261230469 15 Unmodified _VAKKTDAV_ REV__ENST00000533637.5_1_11:59556413-59568372:+|nuORF 14.581692164780916 0.4900557725783909 3 VKD 3 -1 19.935 0.0 0.0 2.4004 0.0 0.0 188.1141318592626 297.1561373346313 485.2702691938939 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 VKD 2.4004 - 140 + 1 1.466 72179.2 1.0 3903 5243 9133 HBL1_DMSO_200M_050219_1,9148 HBL1_DMSO_200M_050219_1,9148,VAKKTDAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9150 47.955 5.3 9652100.0 25 0 992870.0 + 24963 MPPPPPQGV 9 82 460.2385793050109 918.462605676822 2 460.2390930056572 MULTI CID FTMS 0 0 0 9149 10644824.0 0.3536086013915767 21 -2.065128326416016 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 67.03532852164291 0.0222449892513529 3 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 42.172 0.0 0.0 4.5916 4.5916 84.31 0.0 0.0 0.0 3.979400086720375 14.463950151760656 3.979400086720375 11.15093175506608 0 1.579689690656103 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;[VG][EP]HPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQGV;[VG]{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}PQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;[VG][HT]PY[{M(Oxidation (M))|F}V] 4.5916;3.3775;2.6569;2.2188;2.1931;1.7654;1.4328;0.80707 -;+;-;-;-;-;-;- + 261 1 1.485 45412.2 1.0 3904 5244 9149 HBL1_DMSO_200M_050219_1,9150 HBL1_DMSO_200M_050219_1,9150,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9151 47.956 22.0 1345100.0 25 0 130380.0 + 36972 TFEWVDSM 8 72 507.71336082882016 1013.4121687244404 2 507.7137634158134 MULTI CID FTMS 0 0 0 9149 1593122.375 0.0580684009620899 3 -0.2191162109375 2 Unmodified _TFEWVDSM_ ENSG00000112159|ENST00000369393|MDN1 14.581692164780916 0.6954967302934248 3 SM 2 6 22.351 0.0 0.0 2.2055 0.0 0.0 777.3291436773685 0.0 777.3291436773685 0.0 12.07361841247586 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 + SM 2.2055 + + 32 + 1 1.485 33737.0 1.0 3905 5244 9149 HBL1_DMSO_200M_050219_1,9151 HBL1_DMSO_200M_050219_1,9151,TFEWVDSM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9152 47.957 14.0 3666600.0 25 0 407470.0 + 41634 VPPPSAQEI 9 79 469.25301885211206 936.491484771024 2 469.2530700564384 MULTI CID FTMS 0 0 0 9149 3449511.75 0.2970893908314538 3 -0.2191162109375 3 Unmodified _VPPPSAQEI_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 39.957323273325 0.0756908302845263 3 {[HG]|PP}ASPVQE{I|L} 9 4 + 52.699 0.0 0.0 5.6273 5.6273 84.909 0.0 0.0 0.0 2.6312881885056782 30.815016636499024 2.6312881885056782 8.02378753635658 0 0.4247425010840047 0.0 0.7059771852360797 0.0 {[HG]|PP}ASPVQE{I|L};{[HG]|PP}ASPQVE{I|L};{[HG]|PP}ASPV[AG]E{I|L};[VP]YYSPV{I|L};{[HG]|PP}ASPQEV{I|L};{[HG]|PP}ASQEPV{I|L};{[HG]|PP}ASP[AG]VE{I|L};{[HG]|PP}ASQPVE{I|L};{[HG]|PP}ASP[AG]EV{I|L};{[HG]|PP}ASQPEV{I|L} 5.6273;4.7705;4.644;4.5746;4.4491;3.8056;3.7873;3.6176;3.4658;3.2962 -;-;-;-;-;-;-;-;-;- 328 1 1.485 45526.0 1.0 3906 5244 9149 HBL1_DMSO_200M_050219_1,9152 HBL1_DMSO_200M_050219_1,9152,VPPPSAQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9153 47.958 27.0 3306500.0 25 0 289730.0 + 4138 DAPHPLSKI 9 90 326.5186958319762 976.5342580961284 3 326.5184203982353 MULTI CID FTMS 0 0 0 9149 1603010.5 0.5477002165588372 -2 0.1713294982910156 4 Unmodified _DAPHPLSKI_ ENSG00000180304|ENST00000326005|OAZ2;ENST00000560837.5_1_15:64982571-64983740:-|nuORF 20.41453444215458 0.284085796332423 3 {I|L}PSK{I|L} 5 5 19.144 0.0 0.0 1.9604 0.0 0.0 420.1754496981559 0.0 420.1754496981559 0.0 11.185625271001172 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 {I|L}PSK{I|L} 1.9604 - 53 + 1 1.485 75599.8 1.0 3907 5244 9149 HBL1_DMSO_200M_050219_1,9153 HBL1_DMSO_200M_050219_1,9153,DAPHPLSKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9154 47.96 34.0 1453900.0 25 0 69760.0 + 39555 VAYQREPQI 9 85 552.2959642988719 1102.5773756645438 2 552.2972289919853 MULTI CID FTMS 0 0 0 9149 1552525.625 0.990012516835714 1 -0.0489387512207031 5 Unmodified _VAYQREPQI_ ENSG00000165271|ENST00000297990|NOL6;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6 36.506200033944 0.094635877243972 3 VAG{I|L}ME[R{M(Oxidation (M))|F}]N 9 6 71.353 0.0 0.0 6.4715 0.0 0.0 0.0 82.06686578922108 82.06686578922108 60.09397647752872 0.0 0.0 0.0 0 0.6694451763165201 1.3979400086720375 0.0 0.3054621874040891 VAG{I|L}ME[R{M(Oxidation (M))|F}]N 6.4715 - 354 + 1 1.485 44865.1 1.0 3908 5244 9149 HBL1_DMSO_200M_050219_1,9154 HBL1_DMSO_200M_050219_1,9154,VAYQREPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9155 47.961 31.0 1871800.0 25 0 154370.0 + 12942 HAFKISKI 8 91 472.2897910998571 942.5650292665142 2 472.2897521853447 MULTI CID FTMS 0 0 0 9149 1215462.875 0.3175695597862878 -2 0.1713294982910156 6 Unmodified _HAFKISKI_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4 34.40172386719151 0.3279500639400574 3 [HA]{M(Oxidation (M))|F}K{I|L}SK{I|L} 8 0 + 46.552 0.0 0.0 4.9389 4.9389 87.126 0.0 0.0 0.0 8.240312677277188 8.240312677277188 8.240312677277188 21.180993120779945 0 1.3979400086720375 1.6989700043360187 0.0 0.0 + + [HA]{M(Oxidation (M))|F}K{I|L}SK{I|L};AA{I|L}[YK]KH{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{I|L}SKH{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{I|L}HSK{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AH{I|L}SK{I|L} 4.9389;2.6917;2.4564;1.3156;0.91222 +;-;-;-;- + 184 1 1.485 50098.1 1.0 3909 5244 9149 HBL1_DMSO_200M_050219_1,9155 HBL1_DMSO_200M_050219_1,9155,HAFKISKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9156 47.962 44.0 1171900.0 25 0 278600.0 + 20759 LLSWGPILL 9 74 337.87810075397203 1010.6124728621162 3 337.8777953982353 MULTI CID FTMS 0 0 0 9149 1079968.25 0.1340347424542892 6 -0.4801559448242187 7 Unmodified _LLSWGPILL_ REV__ENST00000578910.1_1_17:80151727-80156240:-|nuORF 26.88365393820708 0.1891292719743517 3 {I|L}{I|L}{[ET]|[MV]}K{I|L} 6 -1 36.638 0.0 0.0 3.6253 0.0 0.0 0.0 310.15256677799067 310.15256677799067 14.190884878976211 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.5 0.0 {I|L}{I|L}{[ET]|[MV]}K{I|L} 3.6253 - 124 + 1 1.485 50817.1 1.0 3910 5244 9149 HBL1_DMSO_200M_050219_1,9156 HBL1_DMSO_200M_050219_1,9156,LLSWGPILL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9157 47.963 56.0 1076900.0 25 0 106600.0 + 45512 YTSGTFRTV 9 92 516.2614406525612 1030.5083283719223 2 516.2617065310478 MULTI CID FTMS 0 0 0 9149 1025378.5625 0.1682679968387141 7 -0.5614395141601562 8 Unmodified _YTSGTFRTV_ ENSG00000112118|ENST00000596288|MCM3;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;nc|ENSG00000112118|P25205-2|MCM3 28.49450938151212 0.1686335738423394 3 YTSGT{M(Oxidation (M))|F} 6 3 61.86 0.0 0.0 6.0028 0.0 0.0 0.0 371.2058199518188 371.2058199518188 51.85972531752853 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + YTSGT{M(Oxidation (M))|F} 6.0028 + + 112 + 1 1.485 52047.2 1.0 3911 5244 9149 HBL1_DMSO_200M_050219_1,9157 HBL1_DMSO_200M_050219_1,9157,YTSGTFRTV False True YTSGTFRTV 47.963458 516.261706531048 72877240.0 9149.0 ENSG00000112118|ENST00000596288|MCM3;;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;;nc|ENSG00000112118|P25205-2|MCM3 5.060526053110759 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9158 47.965 81.0 714980.0 25 0 112900.0 + 14392 IFHEKTSEF 9 93 379.857380291236 1136.550311473908 3 379.8571655154228 MULTI CID FTMS 0 0 0 9149 703807.1875 0.1002885921537731 3 -0.2191162109375 9 Unmodified _IFHEKTSEF_ ENSG00000003989|ENST00000494857|SLC7A2;nc|ENSG00000003989|P52569-2|SLC7A2;nc|ENSG00000003989|P52569-3|SLC7A2 21.74664581756881 0.2544899275067181 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}D 4 7 34.253 0.0 0.0 3.0137 0.0 0.0 0.0 621.2941828940831 621.2941828940831 13.283409326844264 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.3807196863200844 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}D 3.0137 - 115 1 1.485 51813.5 1.0 3912 5244 9149 HBL1_DMSO_200M_050219_1,9158 HBL1_DMSO_200M_050219_1,9158,IFHEKTSEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9159 47.967 98.0 707720.0 25 0 120840.0 + 36428 SYYGNRAATL 10 79 558.2772319818401 1114.5399110304802 2 558.2774536013603 MULTI CID FTMS 0 0 0 9149 641310.0625 0.2467554457385574 -3 0.2606277465820312 10 Unmodified _SYYGNRAATL_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 47.7319792270244 0.0934623409360514 3 SGY[MT] 5 7 30.758 0.0 0.0 2.7597 0.0 0.0 557.3433094709 0.0 557.3433094709 0.0 -2.592254816411156 -2.592254816411156 0.0 0 0.4247425010840047 0.0 0.7302046884880937 0.0 SGY[MT] 2.7597 - 102 1 1.485 58700.2 1.0 3913 5244 9149 HBL1_DMSO_200M_050219_1,9159 HBL1_DMSO_200M_050219_1,9159,SYYGNRAATL True True SYYGNRAATL 47.96742 558.27745360136 36435800.0 9149.0 ENSG00000168259|ENST00000457167|DNAJC7;;nc|ENSG00000168259|Q99615-2|DNAJC7 8.737855275472006 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9160 47.969 87.0 612840.0 25 0 92466.0 + -1 HPMPRVNEI 9 72 546.7841986702939 1091.5538444073875 2 546.7847167849541 MULTI CID FTMS 0 0 0 9149 625883.125 0.5982220478940605 3 -0.2191162109375 11 Oxidation (M) _HLFLCLSM(Oxidation (M))L_ ENSG00000084774|ENST00000264705|CAD 11.640296217721598 0.521594087909532 3 HPM 3 -1 33.5 0.0 0.0 3.069 0.0 0.0 0.0 723.379231826224 723.379231826224 14.035984316004216 0.0 0.0 0.0 0 0.7302046884880938 0.0 0.0 0.0 HPM 3.069 - 20 + 1 1.485 46787.6 1.0 3914 5244 9149 HBL1_DMSO_200M_050219_1,9160 HBL1_DMSO_200M_050219_1,9160,HLFLCLSML False False HPMPRVNEI 47.969368 546.784716784954 19839410.0 9149.0 ENSG00000084774|ENST00000264705|CAD 4.057795286178589 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9161 47.971 99.0 743420.0 25 0 64829.0 + 43223 WAPIRDGASI 10 99 362.529520375864 1084.566731727792 3 362.5292236208916 MULTI CID FTMS 0 0 0 9149 575092.625 0.1017628998427706 16 -1.5842170715332031 12 Unmodified _WAPIRDGASI_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 22.736283301280096 0.4578556481593033 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 5 -1 45.049 0.0 0.0 4.1537 0.0 0.0 0.0 485.24628626041255 485.24628626041255 31.77825934852436 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.7614393726401688 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 4.1537 - 114 + 1 1.485 66102.6 1.0 3915 5244 9149 HBL1_DMSO_200M_050219_1,9161 HBL1_DMSO_200M_050219_1,9161,WAPIRDGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9162 47.974 102.0 574580.0 25 0 69669.0 + + 21172 LPTKGPTEI 9 82 478.27705733776247 954.539561742325 2 478.2765991091728 MULTI CID FTMS 0 0 0 9149 552735.0 1.0 0 0.0 13 Unmodified _LPCHLFLL_ ENSG00000177576|ENST00000318240|C18orf32 32.45364647766026 0.3613649037604678 3 {I|L}PTK 4 -1 50.962 0.0 0.0 5.3389 0.0 0.0 0.0 512.2374361627561 512.2374361627561 29.728612290913112 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 {I|L}PTK 5.3389 - 239 + 1 1.485 49108.0 1.0 3916 5244 9149 HBL1_DMSO_200M_050219_1,9162 HBL1_DMSO_200M_050219_1,9162,LPCHLFLL False False LPTKGPTEI 47.973681 478.276599109173 4554532.0 9149.0 ENSG00000177576|ENST00000318240|C18orf32 4.62414042154948 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9163 47.976 89.0 580210.0 25 0 35788.0 -1 IPSQYQCN 8 101 505.2245263136408 1008.4344996940816 2 505.2245361208916 MULTI CID FTMS 0 0 0 9149 476193.5625 1.0 0 0.0 14 Carbamidomethyl (C) _IPSQYQC(Carbamidomethyl (C))N_ ENSG00000205403|ENST00000394634|CFI 10.183394434864962 0.7604730176254005 3 [{I|L}P]{[CP]|[EA]}[YC(Carbamidomethyl (C))]ASV 9 -1 [{I|L}P]{[CP]|[EA]}[YC(Carbamidomethyl (C))]A + + 17.232 -7.4472 -0.9259 1.7088 1.7088 48.658 0.0 0.0 0.0 0.0 7.231975075880328 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 [{I|L}P]{[CP]|[EA]}[YC(Carbamidomethyl (C))]ASV 1.7088 - 378 + 1 1.485 42425.0 1.0 3917 5244 9149 HBL1_DMSO_200M_050219_1,9163 HBL1_DMSO_200M_050219_1,9163,IPSQYQCN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9164 47.98 220.0 223940.0 25 0 12723.0 + 14393 IFHEKTSEF 9 92 569.2823740971244 1136.5501952610489 2 569.2819091677666 MULTI CID FTMS 0 0 0 9149 361428.0625 0.1239104679245425 3 -0.2191162109375 15 Unmodified _IFHEKTSEF_ ENSG00000003989|ENST00000494857|SLC7A2;nc|ENSG00000003989|P52569-2|SLC7A2;nc|ENSG00000003989|P52569-3|SLC7A2 38.17557092003332 0.0854718145212029 3 {I|L}{M(Oxidation (M))|F}HE 4 5 40.667 0.0 0.0 3.5781 0.0 0.0 0.0 607.2731417291624 607.2731417291624 25.18212391904732 0.0 0.0 0.0 0 1.1382104921644451 0.0 0.4247425010840047 0.0 + {I|L}{M(Oxidation (M))|F}HE 3.5781 + + 225 + 1 1.485 42355.7 1.0 3918 5244 9149 HBL1_DMSO_200M_050219_1,9164 HBL1_DMSO_200M_050219_1,9164,IFHEKTSEF True True IFHEKTSEF 47.979801 569.281909167767 69041160.0 9149.0 nc|ENSG00000003989|P52569-3|SLC7A2;;nc|ENSG00000003989|P52569-2|SLC7A2;;ENSG00000003989|ENST00000494857|SLC7A2 6.909615834554036 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9165 47.982 122.0 502220.0 25 0 92836.0 + 39131 TYIDKSTQL 9 91 534.7823719448194 1067.5501909564389 2 534.7822143435478 MULTI CID FTMS 0 0 0 9149 351286.5 0.0739300720493391 -4 0.3203048706054687 16 Unmodified _TYIDKSTQL_ ENSG00000119965|ENST00000481909|C10orf88 37.97399986684836 0.0865783450051559 3 [YT]{I|L}D 4 5 46.682 0.0 0.0 4.3729 0.0 0.0 0.0 572.3062227838499 572.3062227838499 31.197887582883936 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7742275032520141 0.0 + [YT]{I|L}D 4.3729 + + 212 + 1 1.485 51186.6 1.0 3919 5244 9149 HBL1_DMSO_200M_050219_1,9165 HBL1_DMSO_200M_050219_1,9165,TYIDKSTQL True True TYIDKSTQL 47.982324 534.782214343548 65509164.0 9149.0 ENSG00000119965|ENST00000481909|C10orf88 4.748637676239014 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9166 47.986 187.0 339530.0 25 0 25876.0 + 2185 AQAPDLQRV 9 102 499.274702651945 996.53485237069 2 499.2747985720634 MULTI CID FTMS 0 0 0 -1 0 17 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 26.268140514670165 0.1969607489560049 3 [QA]APM 5 5 32.888 0.0 0.0 3.3002 0.0 0.0 0.0 495.2796238923426 495.2796238923426 20.41325298820567 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 [QA]APM 3.3002 - 208 + 1 1.485 55258.6 1.0 3920 5244 9149 HBL1_DMSO_200M_050219_1,9166 HBL1_DMSO_200M_050219_1,9166,AQAPDLQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9167 47.991 249.0 447610.0 25 0 62404.0 + 39429 VAMGRVVKV 9 137 320.2000581167198 957.5783449503596 3 320.1997863650322 MULTI CID FTMS 0 0 0 9149 264308.34375 0.6460314993047299 -2 0.1713294982910156 18 Unmodified _VAMGRVVKV_ ENSG00000148843|ENST00000369797|PDCD11 29.84058131909904 0.1515068451768857 3 VAMV 4 5 42.318 0.0 0.0 4.4192 0.0 0.0 0.0 554.3407686822874 554.3407686822874 30.010559176113524 0.0 0.0 0.0 0 0.4666152729074456 1.5228787452803376 0.0 0.0 VAMV 4.4192 - 334 + 1 1.485 93753.3 1.0 3921 5244 9149 HBL1_DMSO_200M_050219_1,9167 HBL1_DMSO_200M_050219_1,9167,VAMGRVVKV False True VAMGRVVKV 47.990558 320.199786365032 2005355.125 9149.0 ENSG00000148843|ENST00000369797|PDCD11 4.589126586914063 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9168 47.995 256.0 606360.0 25 0 55283.0 -1 0 144 300.1989157225387 598.3832785118774 2 300.1986572146416 MULTI CID FTMS 0 0 0 9149 266664.53125 1.0 0 0.0 19 3 N 1 -1 12.346 0.0 0.0 2.0633 0.0 0.0 61.05325099107353 420.2762579036079 481.3295088946815 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 N 2.0633 - 7 + 1 1.485 125719.7 1.0 3922 5244 9149 HBL1_DMSO_200M_050219_1,9168 HBL1_DMSO_200M_050219_1,9168, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9169 47.999 207.0 368150.0 25 0 39385.0 + 71 AAFGQLHKV 9 103 324.1878124303435 969.5416078912306 3 324.1868774294853 MULTI CID FTMS 0 0 0 9149 248230.0 1.0 0 0.0 20 Unmodified _AAFGQLHKV_ ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3 19.361941925380144 0.3125782356748823 3 AA{M(Oxidation (M))|F}{[QG]|[NA]}{I|L}H 7 2 30.832 0.0 0.0 3.1801 0.0 0.0 0.0 242.1510408990844 242.1510408990844 20.23643135587053 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + AA{M(Oxidation (M))|F}{[QG]|[NA]}{I|L}H 3.1801 + + 36 + 1 1.485 67285.6 1.0 3923 5244 9149 HBL1_DMSO_200M_050219_1,9169 HBL1_DMSO_200M_050219_1,9169,AAFGQLHKV False True AAFGQLHKV 47.999233 324.186877429485 1864700.625 9149.0 ENSG00000129351|ENST00000588657|ILF3;;nc|ENSG00000129351|Q12906-4|ILF3;;nc|ENSG00000129351|Q12906-2|ILF3;;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;;nc|ENSG00000129351|Q12906|ILF3;;nc|ENSG00000129351|Q12906-5|ILF3;;nc|ENSG00000129351|Q12906-3|ILF3;;nc|ENSG00000129351|Q12906-6|ILF3 5.540507157643636 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9171 48.004 28.0 1659500.0 25 0 186570.0 + 4604 DAYTKKELI 9 78 540.8004966501624 1079.5864403671246 2 540.8005859255791 MULTI CID FTMS 0 0 0 9170 1705314.375 0.4608869952613065 -1 0.0489387512207031 1 Unmodified _DAYTKKELI_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 29.84058131909904 0.1515068451768857 3 {[DA]|[EG]}YTK 5 4 43.06 0.0 0.0 3.9885 0.0 0.0 0.0 498.2941988580688 498.2941988580688 24.1195437047216 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YTK 3.9885 + + 45 + 1 1.485 40431.0 1.0 3924 5245 9170 HBL1_DMSO_200M_050219_1,9171 HBL1_DMSO_200M_050219_1,9171,DAYTKKELI False True DAYTKKELI 48.003872 540.800585925579 26797956.0 9170.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 6.746698220570882 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9172 48.005 38.0 1140000.0 25 0 77887.0 + 4139 DAPHPLSKI 9 68 489.2732652895928 976.5319776459856 2 489.2744628787041 MULTI CID FTMS 0 0 0 9170 1274827.25 0.4350693074003714 -1 0.0489387512207031 2 Unmodified _DAPHPLSKI_ ENSG00000180304|ENST00000326005|OAZ2;ENST00000560837.5_1_15:64982571-64983740:-|nuORF 38.17557092003332 0.0854718145212029 3 C[{I|L}P]SK{I|L} 6 4 22.681 0.0 0.0 2.3226 0.0 0.0 317.1566247180544 0.0 317.1566247180544 0.0 17.196596782814808 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.0 C[{I|L}P]SK{I|L} 2.3226 - 78 + 1 1.485 39242.0 1.0 3925 5245 9170 HBL1_DMSO_200M_050219_1,9172 HBL1_DMSO_200M_050219_1,9172,DAPHPLSKI True True DAPHPLSKI 48.005051 489.274462878704 35561722.0 9170.0 ENST00000560837.5_1_15:64982571-64983740:-|nuORF;;ENSG00000180304|ENST00000326005|OAZ2 5.5333015124003095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9173 48.007 92.0 735540.0 25 0 150230.0 + -1 VLYLCSQRL 9 88 384.5469168097168 1150.6189210293503 3 384.5458862185478 MULTI CID FTMS 0 0 0 9170 285122.375 0.134873244000421 -2 0.1804695129394531 3 Carbamidomethyl (C) _VLYLC(Carbamidomethyl (C))SQRL_ REV__ENST00000466936.5_1_8:38873382-38873475:+|nuORF 13.614867670302877 0.4681447649821485 3 VYPYM 5 -1 61.766 0.0 0.0 5.3681 0.0 0.0 0.0 494.2847994440063 494.2847994440063 48.55388478663194 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 VYPYM 5.3681 - 165 + 1 1.485 65212.9 1.0 3926 5245 9170 HBL1_DMSO_200M_050219_1,9173 HBL1_DMSO_200M_050219_1,9173,VLYLCSQRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9174 48.01 139.0 857620.0 25 0 108570.0 + 3875 DALAEAQRV 9 128 486.7586945050697 971.5028360769394 2 486.7597228884697 MULTI CID FTMS 0 0 0 9170 272979.625 0.1140685663843467 8 -0.7483024597167969 4 Unmodified _DALAEAQRV_ ENSG00000136824|ENST00000374793|SMC2;nc|ENSG00000136824|O95347-2|SMC2 60.07390631473393 0.0260411565414776 3 {[DA]|[EG]}{I|L}AEAQRV 9 0 + 86.961 0.0 0.0 8.9512 8.9512 94.414 0.0 0.0 0.0 61.34830416504886 12.545418775962348 12.545418775962348 9.208187539523747 0 1.424742501084005 1.6989700043360187 0.7059771852360797 0.5189301784845296 + + {[DA]|[EG]}{I|L}AEAQRV;{[DA]|[EG]}{I|L}AEA[AG]RV;{[DA]|[EG]}{I|L}AEA[RN]{I|L};{[DA]|[EG]}{I|L}AVNDRV;{[DA]|[EG]}{I|L}V[DG]QRV;{[DA]|[EG]}{I|L}VANDRV;{[DA]|[EG]}{I|L}[RD]QRV;{[DA]|[EG]}{I|L}V[DG][AG]RV;{[DA]|[EG]}Q[KG]AQRV;{[DA]|[EG]}{I|L}V{[WN]|[YH]}RV 8.9512;8.0034;7.284;6.8938;6.5518;6.1146;5.8351;5.6039;5.1613;4.8932 +;-;-;-;-;-;-;-;-;- + 886 + 1 1.485 93318.3 1.0 3927 5245 9170 HBL1_DMSO_200M_050219_1,9174 HBL1_DMSO_200M_050219_1,9174,DALAEAQRV True True DALAEAQRV 48.00986 486.75972288847 4463293.0 9170.0 ENSG00000136824|ENST00000374793|SMC2;;nc|ENSG00000136824|O95347-2|SMC2 5.995831648508708 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9175 48.015 275.0 404860.0 25 0 24746.0 + -1 VADEMYTL 8 138 479.214228776049 0 479.2133666872978 PEAK CID FTMS 0 0 0 9170 241110.359375 1.0 0 0.0 5 Oxidation (M) _VADEM(Oxidation (M))YTL_ REV__ENSG00000149179|ENST00000278460|CSTPP1;REV__ENST00000522712.6_1_11:46958356-47074212:+|nuORF;REV__ENST00000526424.5_1_11:46969642-47125317:+|nuORF;REV__ENST00000532840.5_1_11:46958356-47159359:+|nuORF;REV__nc|ENSG00000149179|Q9H6J7-2|CSTPP1;REV__nc|ENSG00000149179|Q9H6J7-3|CSTPP1;REV__nc|ENSG00000149179|Q9H6J7-4|CSTPP1 10.183394434864962 0.5394990767616434 3 V 1 -1 5.4846 0.0 0.0 0.57345 0.0 0.0 788.28736150542 66.0356691949828 854.3230307004028 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.57345 + + 153 + 1 1.485 90096.2 1.0 3928 5245 9170 HBL1_DMSO_200M_050219_1,9175 HBL1_DMSO_200M_050219_1,9175,VADEMYTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9176 48.021 348.0 439770.0 25 0 28441.0 3381 AYQQRVTAL 9 155 525.290444346138 1048.566335759076 2 525.2905761599541 MULTI CID FTMS 0 0 0 9170 199592.234375 0.0684312458648442 -3 0.2202682495117187 6 Unmodified _AYQQRVTAL_ ENSG00000135968|ENST00000309863|GCC2;ENST00000393321.2_3_2:109102933-109106471:+|nuORF 51.629811660486645 0.0367964933207742 3 KTAEN 5 8 44.02 0.0 0.0 4.1981 0.0 0.0 0.0 502.2802218072876 502.2802218072876 3.816869362086841 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.3494850021680094 0.25 KTAEN 4.1981 - 957 + 1 1.485 119352.3 1.0 3929 5245 9170 HBL1_DMSO_200M_050219_1,9176 HBL1_DMSO_200M_050219_1,9176,AYQQRVTAL True True KTAENFRAL 48.021222 525.290576159954 19399304.625 9170.0 ENSG00000108179|ENST00000225174|PPIF;;ENSG00000271567|ENST00000581164|PPIAL4E;;ENST00000492149.1_1_10:81107262-81109515:+|nuORF;;ENSG00000263353|ENST00000577856|PPIAL4A;;nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C;;nc|ENSG00000108179|P30405-2|PPIF;;ENSG00000270339|ENST00000584068|PPIAL4H;;ENSG00000196262|ENST00000468812|PPIA;;nc|ENSG00000289549|F5H284|PPIAL4D;;ENSG00000171497|ENST00000307720|PPID;;ENSG00000279782|ENST00000581138|PPIAL4F;;ENSG00000236334|ENST00000419275|PPIAL4G 4.412534077962239 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9177 48.027 343.0 461250.0 25 0 61364.0 + 33287 SFQEVREY 8 152 529.2509948943479 1056.4874368554956 2 529.2503539919853 MULTI CID FTMS 0 0 0 9170 175927.3125 0.1689048302678181 -2 0.1804695129394531 7 Unmodified _SFQEVREY_ ENSG00000097046|ENST00000234626|CDC7 75.76082778847304 0.1037447112370312 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEVREY 8 0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} + + 60.45 23.724 10.134 5.7218 5.7218 58.138 0.0 0.0 0.0 0.0 37.1733342625859 0.0 0.0 0 1.5172203223519531 0.0 1.1989700043360187 1.1861818737241734 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEVREY 5.7218 + + 1230 + 1 1.485 124733.3 1.0 3930 5245 9170 HBL1_DMSO_200M_050219_1,9177 HBL1_DMSO_200M_050219_1,9177,SFQEVREY True True SFQEVREY 48.027441 529.250353991985 6614365.0 9170.0 ENSG00000097046|ENST00000234626|CDC7 4.944860935211182 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9178 48.041 800.0 203870.0 25 0 10223.0 -1 NPYSLCLK 8 168 497.7545167713025 993.4944806094052 2 497.7538940310478 MULTI CID FTMS 0 0 0 9170 154441.296875 0.4816659560108084 1 -0.0694007873535156 8 Carbamidomethyl (C) _NPYSLC(Carbamidomethyl (C))LK_ ENST00000522958.5_1_5:179046175-179048291:-|nuORF 25.399314129420983 0.5099049743284904 3 NPYA 4 -1 52.977 0.0 0.0 5.3324 0.0 0.0 0.0 545.2750495396843 545.2750495396843 28.05584714187489 0.0 0.0 0.0 0 0.7059771852360797 1.3979400086720375 0.0 0.0 NPYA 5.3324 - 1326 + 1 1.485 122737.0 0.7799999713897705 3931 5245 9170 HBL1_DMSO_200M_050219_1,9178 HBL1_DMSO_200M_050219_1,9178,NPYSLCLK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9179 48.055 800.0 500580.0 25 0 16131.0 -1 0 134 714.1220706675417 3565.5739710047083 5 714.5219604372978 MULTI CID FTMS 0 0 0 9170 150992.375 0.2766318237244149 1 -0.0694007873535156 9 3 TGEG[HM]Q{[WS]|[C(Carbamidomethyl (C)){I|L}]}H 10 -1 40.323 0.0 0.0 1.1309 0.0 0.0 195.0337378696925 2216.970306563652 2412.004044433344 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.305462187404089 0.0 TGEG[HM]Q{[WS]|[C(Carbamidomethyl (C)){I|L}]}H 1.1309 - 1319 + 1 1.485 279156.8 0.75 3932 5245 9170 HBL1_DMSO_200M_050219_1,9179 HBL1_DMSO_200M_050219_1,9179, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9180 48.069 800.0 309470.0 25 0 93469.0 + -1 IYVDDMNP 8 197 491.7113789218092 981.4082049104184 2 491.7111389040947 MULTI CID FTMS 0 0 0 9170 122495.6015625 1.0 0 0.0 10 Oxidation (M) _IYVDDM(Oxidation (M))NP_ REV__ENSG00000136478|ENST00000584379|TEX2;REV__ENST00000584498.5_1_17:62226331-62226475:-|nuORF;REV__nc|ENSG00000136478|Q8IWB9-2|TEX2 10.183394434864962 0.7604730176254005 3 AE 2 -1 26.428 0.0 0.0 2.6929 0.0 0.0 0.0 778.3061390147046 778.3061390147046 13.66420376155254 0.0 0.0 0.0 0 0.1022338482433752 0.4436974992327127 0.0 0.0 AE 2.6929 - 1159 + 1 1.485 189663.0 0.7200000286102295 3933 5245 9170 HBL1_DMSO_200M_050219_1,9180 HBL1_DMSO_200M_050219_1,9180,IYVDDMNP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9182 48.077 236.0 492630.0 25 0 33527.0 + 43085 VYMNRVKEI 9 129 576.3168320862482 1150.6191112392962 2 576.3163329958916 MULTI CID FTMS 0 0 0 9181 462881.96875 0.7396138546783517 -1 0.0694007873535156 1 Unmodified _VYMNRVKEI_ ENSG00000197223|ENST00000410067|C1D;ENST00000455013.2_1_10:81784495-81784867:-|nuORF 49.74193281347159 0.0409357517904489 3 VYMNRVKE{I|L} 9 0 + 80.926 0.0 0.0 7.0333 7.0333 90.875 0.0 0.0 0.0 44.86087755061101 12.561216379505067 12.561216379505067 9.208187539523747 0 1.4731975075880328 2.0 0.75 0.7302046884880937 + + VYMNRVKE{I|L};VYMGGRVKE{I|L};VY[YV][HT]KE{I|L};VYPY[W{I|L}][TP]{I|L};VY{I|L}{M(Oxidation (M))|F}[W{I|L}][TP]{I|L};VYPK[KP][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L};VYPKVY[{M(Oxidation (M))|F}V]H;VVHHRYPM{I|L};VVHHR{M(Oxidation (M))|F}{I|L}M{I|L};VYPK{[HG]|PP}[WK]H 7.0333;6.233;5.2801;4.9503;4.8699;4.779;4.7741;4.6371;4.2912;4.1666 +;-;-;-;-;-;-;-;-;- + 812 + 1 1.497 94062.0 1.0 3934 5246 9181 HBL1_DMSO_200M_050219_1,9182 HBL1_DMSO_200M_050219_1,9182,VYMNRVKEI True True VYMNRVKEI 48.076788 576.316332995892 3608165.25 9181.0 ENST00000455013.2_1_10:81784495-81784867:-|nuORF;;ENSG00000197223|ENST00000410067|C1D 5.319618701934815 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9183 48.081 254.0 385690.0 25 0 17428.0 + 18046 KTAENFRAL 9 145 350.5294294975472 1048.5664590928416 3 350.5291931033134 MULTI CID FTMS 0 0 0 9181 140076.25 1.0 0 0.0 2 Unmodified _KTAENFRAL_ ENSG00000108179|ENST00000225174|PPIF;ENSG00000171497|ENST00000307720|PPID;ENSG00000196262|ENST00000468812|PPIA;ENSG00000236334|ENST00000419275|PPIAL4G;ENSG00000263353|ENST00000577856|PPIAL4A;ENSG00000270339|ENST00000584068|PPIAL4H;ENSG00000271567|ENST00000581164|PPIAL4E;ENSG00000279782|ENST00000581138|PPIAL4F;ENST00000492149.1_1_10:81107262-81109515:+|nuORF;nc|ENSG00000108179|P30405-2|PPIF;nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C;nc|ENSG00000289549|F5H284|PPIAL4D 10.073929032068715 0.563993802247229 3 {I|L} 1 8 11.259 0.0 0.0 1.0738 0.0 0.0 917.471776330926 0.0 917.471776330926 0.0 0.6858659651265597 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0738 + + 93 + 1 1.497 84593.7 1.0 3935 5246 9181 HBL1_DMSO_200M_050219_1,9183 HBL1_DMSO_200M_050219_1,9183,KTAENFRAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9184 48.083 60.0 698210.0 25 0 96772.0 + 24813 MPKAGYSSI 9 64 477.2418136546564 952.4690743761128 2 477.2415038943291 MULTI CID FTMS 0 0 0 9181 751472.9375 1.0 0 0.0 3 Unmodified _MPKAGYSSI_ ENSG00000181381|ENST00000682922|DDX60L;ENST00000515088.5_1_4:169391961-169393850:-|nuORF;nc|ENSG00000181381|Q5H9U9-2|DDX60L 14.838274106304384 0.4350285940865338 3 MP 2 7 24.222 0.0 0.0 2.543 0.0 0.0 0.0 721.3503512018186 721.3503512018186 1.6857563354714244 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + MP 2.543 + + 38 + 1 1.497 41036.8 1.0 3936 5246 9181 HBL1_DMSO_200M_050219_1,9184 HBL1_DMSO_200M_050219_1,9184,MPKAGYSSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9185 48.086 163.0 760580.0 25 0 133130.0 -1 MLTYRCSGCI 10 76 610.2651384056611 1218.515723878122 2 610.2652465701103 MULTI CID FTMS 0 0 0 9181 557336.0 0.1136787750980219 -3 0.2498703002929687 4 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LTYRCSGC(Carbamidomethyl (C))I_ ENSG00000249961|ENST00000433154|TERB1 19.256988751693697 0.5244284437930726 3 {[QG]|[NA]}YPY 5 -1 47.447 0.0 0.0 3.8939 0.0 0.0 0.0 607.2302340143186 607.2302340143186 27.24546265559709 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 {[QG]|[NA]}YPY 3.8939 - 55 + 1 1.497 94019.1 1.0 3937 5246 9181 HBL1_DMSO_200M_050219_1,9185 HBL1_DMSO_200M_050219_1,9185,MLTYRCSGCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9186 48.088 92.0 982340.0 25 0 95662.0 33239 SFNPVWDEEP 10 110 407.1791915734353 1218.515745320506 3 407.1798583865166 MULTI CID FTMS 0 0 0 9181 553679.75 0.1149918441486803 -3 0.2498703002929687 5 Unmodified _SFNPVWDEEP_ ENSG00000149782|ENST00000279230|PLCB3;nc|ENSG00000149782|Q01970-2|PLCB3 7.945399516374404 0.6898843699695153 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N 3 7 24.463 0.0 0.0 2.0076 0.0 0.0 0.0 867.3479630101782 867.3479630101782 11.275137257682529 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.4489700043360188 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N 2.0076 + + 246 1 1.497 73444.2 1.0 3938 5246 9181 HBL1_DMSO_200M_050219_1,9186 HBL1_DMSO_200M_050219_1,9186,SFNPVWDEEP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9187 48.092 194.0 491850.0 25 0 28755.0 + 38272 TPYPGFKSHV 10 116 378.1973980792182 1131.5703648378546 3 378.1971923708916 MULTI CID FTMS 0 0 0 9181 409532.90625 1.0 0 0.0 6 Unmodified _TPYPGFKSHV_ ENSG00000151332|ENST00000416007|MBIP;nc|ENSG00000151332|Q9NS73-2|MBIP;nc|ENSG00000151332|Q9NS73-3|MBIP;nc|ENSG00000151332|Q9NS73-5|MBIP 21.59015148037692 0.4836074274810599 3 TPYV{[DS]|[MA]|[CV]|TT}KSHV 10 3 + 50.221 0.0 0.0 4.4382 4.4382 78.712 0.0 0.0 0.0 22.06083711839305 5.509074688805811 5.509074688805811 5.509074688805811 0 0.2134679910804404 1.154901959985743 0.9247425010840048 0.0 TPYV{[DS]|[MA]|[CV]|TT}KSHV;TPYV{[DS]|[MA]|[CV]|TT}KSVH;TPYVRR{[CT]|[{M(Oxidation (M))|F}G]}H;[{M(Oxidation (M))|F}V]DV{[DS]|[MA]|[CV]|TT}KSHV;[{M(Oxidation (M))|F}V]DV{[DS]|[MA]|[CV]|TT}KSVH;{[VA]|[{I|L}G]}[W{I|L}]{[DS]|[MA]|[CV]|TT}VD{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]DVRR{[CT]|[{M(Oxidation (M))|F}G]}H;{[CP]|[EA]}[R{I|L}]{[DS]|[MA]|[CV]|TT}VD{NN|[MP]|[D{I|L}]|[EV]};{[VA]|[{I|L}G]}[NG]K{[DS]|[MA]|[CV]|TT}VD{NN|[MP]|[D{I|L}]|[EV]} 4.4382;3.9514;3.178;1.5719;1.085;0.45772;0.31173;0.28425;0.085141 -;-;-;-;-;-;-;-;- 151 + 1 1.497 87563.3 1.0 3939 5246 9181 HBL1_DMSO_200M_050219_1,9187 HBL1_DMSO_200M_050219_1,9187,TPYPGFKSHV False True TPYPGFKSHV 48.091936 378.197192370892 4987166.5 9181.0 nc|ENSG00000151332|Q9NS73-2|MBIP;;nc|ENSG00000151332|Q9NS73-5|MBIP;;nc|ENSG00000151332|Q9NS73-3|MBIP;;ENSG00000151332|ENST00000416007|MBIP 5.780445416768392 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9188 48.095 127.0 549700.0 25 0 57202.0 + -1 PVLMQNSTIQG 11 102 602.3079046595227 1202.601256385845 2 602.3083373904228 MULTI CID FTMS 0 0 0 9181 401051.71875 0.1283415296513504 -3 0.2498703002929687 7 Oxidation (M) _PVLM(Oxidation (M))QNSTIQG_ REV__ENSG00000065183|ENST00000349139|WDR3 17.11289562659939 0.6791789249425932 3 [VP]SQ{I|L}SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]} 11 -1 + 62.112 0.0 0.0 5.1648 5.1648 84.072 0.0 0.0 0.0 8.852849421346406 45.6855995794414 8.852849421346406 9.128498242810991 0 0.5 0.5376020021010439 1.960409376976188 0.3494850021680094 [VP]SQ{I|L}SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[VP]SQ{I|L}S[AG]{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[VP]S[AG]{I|L}SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};{[QS]|[NT]}[VP]{I|L}SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[{I|L}P][NS]{I|L}SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[VP]SQ{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}N{[DS]|[MA]|[CV]|TT};[VP]{I|L}{[QS]|[NT]}SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[VP]S[AG]{I|L}S[AG]{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};{[QS]|[NT]}[VP]{I|L}S[AG]{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[{I|L}P][NS]{I|L}S[AG]{M(Oxidation (M))|F}{I|L}{[QG]|[NA]} 5.1648;4.4058;4.4058;3.8715;3.75;3.557;3.3809;3.3586;3.1125;2.9909 -;-;-;-;-;-;-;-;-;- 433 1 1.497 54345.9 1.0 3940 5246 9181 HBL1_DMSO_200M_050219_1,9188 HBL1_DMSO_200M_050219_1,9188,PVLMQNSTIQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9189 48.099 235.0 226300.0 25 0 24460.0 + 8062 ENSSDFQSNIA 11 106 606.2625461536967 1210.5105393741933 2 606.2631713747978 MULTI CID FTMS 0 0 0 9181 336291.25 1.0 0 0.0 8 Unmodified _ENSSDFQSNIA_ ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 10.799506525563784 0.8105043987015127 3 {[DA]|[EG]}G{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F} 6 9 15.801 0.0 0.0 1.3053 0.0 0.0 0.0 528.2440348178058 528.2440348178058 4.017897008323594 0.0 0.0 0.0 0 0.0 0.958607314841775 1.3494850021680094 0.0 {[DA]|[EG]}G{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F} 1.3053 - 320 1 1.497 41747.2 1.0 3941 5246 9181 HBL1_DMSO_200M_050219_1,9189 HBL1_DMSO_200M_050219_1,9189,ENSSDFQSNIA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9190 48.112 734.0 331050.0 25 0 30229.0 -1 GQQQRDMEEER 11 157 711.3069763201012 1420.5993997070022 2 711.8090087771416 MULTI CID FTMS 0 0 0 9181 278103.3125 0.009318214768588 -4 0.2896690368652344 9 Oxidation (M) _GQQQRDM(Oxidation (M))EEER_ ENSG00000188878|ENST00000636174|FBF1;ENST00000585990.5_1_17:73910371-73916335:-|nuORF;nc|ENSG00000188878|Q8TES7-2|FBF1;nc|ENSG00000188878|Q8TES7-5|FBF1;nc|ENSG00000188878|Q8TES7|FBF1 16.149105407346934 0.6992268271266642 3 [AG]AHDEAQGAGGA{M(Oxidation (M))|F}Y 15 -1 + 89.081 0.0 0.0 6.2707 6.2707 77.732 0.0 0.0 0.0 1.4256396202889476 3.9492662415413946 1.4256396202889476 0.6694678963061307 0 0.8935078169319297 1.3979400086720375 1.2856668758921828 1.4361818737241734 [AG]AHDEAQGAGGA{M(Oxidation (M))|F}Y;[AG]AHDEAQGANA{M(Oxidation (M))|F}Y;[AG]AHDEAQQGGA{M(Oxidation (M))|F}Y;[AG]AHDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAGAGAGGA{M(Oxidation (M))|F}Y;[QA]HDEAGAQGGA{M(Oxidation (M))|F}Y;[QA]HDEAGAGANA{M(Oxidation (M))|F}Y;[HD]EAQAGAGAGGA{M(Oxidation (M))|F}Y;[AG]AHDEAGAQGGA{M(Oxidation (M))|F}Y;[QA]HDEAGAQNA{M(Oxidation (M))|F}Y 6.2707;6.2236;6.2236;6.178;6.1703;6.1232;6.1232;6.1033;6.0906;6.0776 -;-;-;-;-;-;-;-;-;- 120201 1 1.497 169399.5 1.0 3942 5246 9181 HBL1_DMSO_200M_050219_1,9190 HBL1_DMSO_200M_050219_1,9190,GQQQRDMEEER False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9191 48.115 174.0 527280.0 25 0 30693.0 + 24221 MALATKTEV 9 123 482.2610561161637 962.5075592991276 2 482.2614318728447 MULTI CID FTMS 0 0 0 9181 247183.78125 0.5524383641320608 -1 0.0694007873535156 10 Unmodified _MALATKTEV_ ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4 39.94969957227396 0.0757326808254658 3 MA{I|L}A{I|L}YATG 9 5 78.242 0.0 0.0 8.129 0.0 0.0 0.0 68.05138574771718 68.05138574771718 51.126590506049325 0.0 0.0 0.0 0 0.5 2.0 1.305462187404089 0.0 MA{I|L}A{I|L}YATG 8.129 - 1247 + 1 1.497 74911.0 1.0 3943 5246 9181 HBL1_DMSO_200M_050219_1,9191 HBL1_DMSO_200M_050219_1,9191,MALATKTEV True True MALATKTEV 48.115065 482.261431872845 2663527.0 9181.0 nc|ENSG00000047849|P27816|MAP4;;nc|ENSG00000047849|P27816-6|MAP4;;nc|ENSG00000047849|P27816-2|MAP4;;nc|ENSG00000047849|P27816-5|MAP4;;ENSG00000047849|ENST00000683076|MAP4 5.7159050305684405 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9192 48.12 272.0 357860.0 25 0 16964.0 + 36999 TFNEPGSEY 9 149 522.219207319205 1042.42386170521 2 522.2187377810478 MULTI CID FTMS 0 0 0 9181 224256.734375 1.0 0 0.0 11 Unmodified _TFNEPGSEY_ ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 19.256988751693697 0.3154191944385105 3 {NN|[MP]|[D{I|L}]|[EV]}[YC(Carbamidomethyl (C))]Y{M(Oxidation (M))|F}Y 7 7 + 20.352 0.0 0.0 1.9523 1.9523 75.986 0.0 0.0 0.0 3.3619724643168816 5.446210596237068 3.3619724643168816 8.166054424704882 0 0.7429928190999391 0.4436974992327127 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[YC(Carbamidomethyl (C))]Y{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}N{[QG]|[NA]}Y[NG]Y;[YE]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y[Y{M(Oxidation (M))|F}];{NN|[MP]|[D{I|L}]|[EV]}[YC(Carbamidomethyl (C))]ENMV;{NN|[MP]|[D{I|L}]|[EV]}[YC(Carbamidomethyl (C))]E{[QC]|[C(Carbamidomethyl (C))A]}{I|L};{[DA]|[EG]}GVWW[Y{M(Oxidation (M))|F}];{NN|[MP]|[D{I|L}]|[EV]}[YC(Carbamidomethyl (C))][MD]N{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VWW[Y{M(Oxidation (M))|F}];{NN|[MP]|[D{I|L}]|[EV]}[YC(Carbamidomethyl (C))]EGGMV 1.9523;1.169;1.0826;0.93789;0.70475;0.51032;0.38262;0.064355;0.049375 -;-;-;-;-;-;-;-;- 503 + 1 1.497 80533.6 1.0 3944 5246 9181 HBL1_DMSO_200M_050219_1,9192 HBL1_DMSO_200M_050219_1,9192,TFNEPGSEY False True TFNEPGSEY 48.12009 522.218737781048 1764488.875 9181.0 ENST00000591595.5_1_19:11130023-11172489:+|nuORF;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;;ENSG00000127616|ENST00000344626|SMARCA4;;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 5.108808358510335 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9193 48.127 403.0 228020.0 25 0 25828.0 + 34136 SLLTAGEASWP 11 101 566.285322743849 0 566.2853881716728 PEAK CID FTMS 0 0 0 9181 207754.953125 1.0 0 0.0 12 Unmodified _SLLTAGEASWP_ REV__ENST00000526084.1_1_11:7687117-7687363:-|nuORF;REV__nc|ENSG00000166394|Q6BCY4-2|CYB5R2 18.1463463914782 0.3750318954284983 3 YVWWVD 6 -1 24.724 0.0 0.0 2.1869 0.0 0.0 197.09153098936864 82.06695734195546 279.1584883313241 0.0 0.0 0.0 0.0 0 0.0 0.0 1.329689690656103 0.0 YVWWVD 2.1869 - 187 + 1 1.497 76145.1 1.0 3945 5246 9181 HBL1_DMSO_200M_050219_1,9193 HBL1_DMSO_200M_050219_1,9193,SLLTAGEASWP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9194 48.142 800.0 74268.0 25 0 18892.0 -1 0 37 1158.4623160023016 3472.3651186071047 3 1159.135180652142 MULTI CID FTMS 0 0 0 9181 186861.484375 1.0 0 0.0 13 3 GE 2 -1 7.0783 0.0 0.0 0.20385 0.0 0.0 2759.1070142143303 524.1622408502561 3283.2692550645866 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GE 0.20385 - 19 + 1 1.497 54967.3 0.6100000143051147 3946 5246 9181 HBL1_DMSO_200M_050219_1,9194 HBL1_DMSO_200M_050219_1,9194, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9195 48.156 782.0 159940.0 25 0 16247.0 + -1 ICFNTDEAAFY 11 122 675.7886684793353 1349.5627840254706 2 675.7892944216728 MULTI CID FTMS 0 0 0 9181 150232.34375 0.0754001571418551 -3 0.2498703002929687 14 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FNTDEAAFY_ REV__ENSG00000163746|ENST00000696113|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7-3|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7|PLSCR2 22.736283301280096 0.5583477779825423 3 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y 11 -1 + 76.775 0.0 0.0 5.6889 5.6889 74.638 0.0 0.0 0.0 0.0072343558602909 1.4337597432449911 0.0072343558602909 0.0072343558602909 0 0.8182503180159344 0.0 1.7530834337684311 2.385151878060192 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y;{[QS]|[NT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AQQNA{M(Oxidation (M))|F}Y;[AG]S{M(Oxidation (M))|F}{M(Oxidation (M))|F}AQQNA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]AQQNA{M(Oxidation (M))|F}Y;[AG]NAM[YT]QNA{M(Oxidation (M))|F}Y;[AG]AE[HD]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]N[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]GGQQNA{M(Oxidation (M))|F}Y 5.6889;5.6884;5.6614;5.0835;5.056;5.0237;5.0125;5.0125;5.0125;5.0125 -;-;-;-;-;-;-;-;-;- 7489 1 1.497 93636.1 1.0 3947 5246 9181 HBL1_DMSO_200M_050219_1,9195 HBL1_DMSO_200M_050219_1,9195,ICFNTDEAAFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9196 48.17 800.0 29196.0 25 0 7077.4 -1 0 33 1135.7910857056718 0 1135.789477527142 PEAK CID FTMS 0 0 0 9181 111300.9921875 1.0 0 0.0 15 3 E 1 -1 6.9897 0.0 0.0 0.30797 0.0 0.0 1613.3400270297204 524.1687105768186 2137.508737606539 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.30797 - 2 + 1 1.497 28461.0 0.6100000143051147 3948 5246 9181 HBL1_DMSO_200M_050219_1,9196 HBL1_DMSO_200M_050219_1,9196, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9198 48.174 2.6 21103000.0 25 0 2945000.0 + 12941 HAFKISKI 8 71 315.1957601528542 942.5654510587626 3 315.1957275271416 MULTI CID FTMS 0 0 0 9197 17247554.0 0.7841801922455086 1 -0.0721893310546875 1 Unmodified _HAFKISKI_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4 16.942295170755138 0.6606234159769251 3 [HA]{M(Oxidation (M))|F} 3 5 23.301 0.0 0.0 2.4721 0.0 0.0 0.0 584.3768848480761 584.3768848480761 -0.0017766722914203 0.0 -0.0017766722914203 0.0 0 0.0 1.5228787452803376 0.0 0.0 + [HA]{M(Oxidation (M))|F} 2.4721 + + 67 1 1.499 51290.9 1.0 3949 5247 9197 HBL1_DMSO_200M_050219_1,9198 HBL1_DMSO_200M_050219_1,9198,HAFKISKI False True HAFKISKI 48.174046 315.195727527142 287845710.0 9197.0 ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 1.9054547101259232 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9199 48.176 60.0 1013400.0 25 0 122380.0 + -1 LDIGTLAKCCR 11 70 653.83516383882 1305.65577474444 2 653.8350707888603 MULTI CID FTMS 0 0 0 9197 1028360.25 1.0 0 0.0 2 2 Carbamidomethyl (C) _LDIGTLAKC(Carbamidomethyl (C))C(Carbamidomethyl (C))R_ REV__ENSG00000060339|ENST00000265872|CCAR1;REV__nc|ENSG00000060339|Q8IX12-2|CCAR1 9.38312468134398 0.8308777417566128 3 [VP]TSPV 6 -1 34.474 0.0 0.0 2.6404 0.0 0.0 0.0 722.3105586026836 722.3105586026836 9.666888604370634 0.0 0.0 0.0 0 0.0 0.6989700043360187 1.110924374808178 0.0 [VP]TSPV 2.6404 - 199 1 1.499 53301.3 1.0 3950 5247 9197 HBL1_DMSO_200M_050219_1,9199 HBL1_DMSO_200M_050219_1,9199,LDIGTLAKCCR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9200 48.177 67.0 862220.0 25 0 83204.0 + 3666 DAENAMRYI 9 93 549.7463159494364 1097.4780789656727 2 549.7477905154228 MULTI CID FTMS 0 0 0 9197 820621.4375 0.5874530315168801 -1 0.1007766723632812 3 Oxidation (M) _DAENAM(Oxidation (M))RYI_ ENSG00000114503|ENST00000321256|NCBP2;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;ENST00000479647.1_1_3:196664263-196668636:-|nuORF;nc|ENSG00000114503|P52298-2|NCBP2 47.74868867922204 0.0453060283459952 3 {[DA]|[EG]}ENA{M(Oxidation (M))|F}RY{I|L} 9 0 + 71.987 0.0 0.0 6.5593 6.5593 60.808 0.0 0.0 0.0 20.000000000000007 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.3494850021680094 + + {[DA]|[EG]}ENA{M(Oxidation (M))|F}RY{I|L};{[DA]|[EG]}ENA{M(Oxidation (M))|F}R{I|L}Y;{[DA]|[EG]}EGGA{M(Oxidation (M))|F}RY{I|L};{[DA]|[EG]}ENA{M(Oxidation (M))|F}[VG]Y{I|L};{[DA]|[EG]}EGGA{M(Oxidation (M))|F}R{I|L}Y;{[DA]|[EG]}ENA{M(Oxidation (M))|F}[VG]{I|L}Y;{[DA]|[EG]}ENA{M(Oxidation (M))|F}[HV][VP];{[DA]|[EG]}EGGA{M(Oxidation (M))|F}[VG]Y{I|L};{[DA]|[EG]}EGGA{M(Oxidation (M))|F}[VG]{I|L}Y;{[DA]|[EG]}EGGA{M(Oxidation (M))|F}[HV][VP] 6.5593;6.5593;5.7203;5.7203;5.7203;5.7203;5.0745;4.5668;4.5668;3.921 +;-;-;-;-;-;-;-;-;- + 374 + 1 1.499 51311.4 1.0 3951 5247 9197 HBL1_DMSO_200M_050219_1,9200 HBL1_DMSO_200M_050219_1,9200,DAENAMRYI True False DAENAMRYI 48.177177 549.747790515423 9531637.0 9197.0 ENST00000479647.1_1_3:196664263-196668636:-|nuORF;;ENSG00000114503|ENST00000321256|NCBP2;;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;;nc|ENSG00000114503|P52298-2|NCBP2 7.819418430328369 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9201 48.18 138.0 790860.0 25 0 62655.0 + 33918 RYQEKISAL 9 116 554.3111894468672 1106.6078259605342 2 554.3116943240166 MULTI CID FTMS 0 0 0 9197 595960.0 0.7420478970526208 -1 0.1007766723632812 4 Unmodified _SLGGFRSLSAL_ ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1 45.739877483867886 0.1412225664835785 3 [YR]QEK{I|L}SA{I|L} 9 7 + 71.195 0.0 0.0 6.4336 6.4336 85.572 0.0 0.0 0.0 4.597270754522967 48.5628284109675 4.597270754522967 5.837287166246213 0 1.5114393726401687 0.0 0.5 0.4247425010840047 [YR]QEK{I|L}SA{I|L};{[SA]|[TG]}V[YQ]R{I|L}SA{I|L};[YR]QTR{I|L}SA{I|L};[YR][AG]EK{I|L}SA{I|L};{[TV]|[{I|L}S]}G[YQ]R{I|L}SA{I|L};[YR]QEKS{I|L}A{I|L};{[SA]|[TG]}V[YQ][VG]{I|L}SA{I|L};[YR]QT[VG]{I|L}SA{I|L};[YR][AG]TR{I|L}SA{I|L};[YR]QEKAS{I|L}{I|L} 6.4336;5.9061;5.7662;5.6015;5.3045;5.1703;5.0779;4.9341;4.9341;4.896 -;-;-;-;-;-;-;-;-;- 1672 1 1.499 85781.1 1.0 3952 5247 9197 HBL1_DMSO_200M_050219_1,9201 HBL1_DMSO_200M_050219_1,9201,SLGGFRSLSAL False False RYQEKISAL 48.179977 554.311694324017 5315843.0 9197.0 ENSG00000173230|ENST00000614479|GOLGB1;;nc|ENSG00000173230|Q14789-4|GOLGB1;;nc|ENSG00000173230|Q14789-2|GOLGB1;;nc|ENSG00000173230|Q14789|GOLGB1;;nc|ENSG00000173230|Q14789-3|GOLGB1 6.323925971984863 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9202 48.184 195.0 747460.0 25 0 191420.0 + 4605 DAYTKKELI 9 128 360.8693840954736 1079.5863228866208 3 360.8690368533134 MULTI CID FTMS 0 0 0 9197 507988.40625 0.7546655607642203 1 -0.0721893310546875 5 Unmodified _DAYTKKELI_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 21.53697664764585 0.2571576504437394 3 {[DA]|[EG]}YTK 5 4 38.94 0.0 0.0 3.607 0.0 0.0 0.0 498.29306970767817 498.29306970767817 17.452315297631706 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YTK 3.607 + + 166 + 1 1.499 120824.4 1.0 3953 5247 9197 HBL1_DMSO_200M_050219_1,9202 HBL1_DMSO_200M_050219_1,9202,DAYTKKELI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9203 48.186 120.0 597400.0 25 0 39550.0 + 38284 TQDGTWRTV 9 110 532.2615666770771 1062.508580420954 2 532.2618286013603 MULTI CID FTMS 0 0 0 9197 365285.375 0.5686726913798678 1 -0.0721893310546875 6 Unmodified _TQDGTWRTV_ ENSG00000170779|ENST00000336219|CDCA4 38.61474834105838 0.0830609365873449 3 WTGDPN 6 8 50.667 0.0 0.0 4.7686 0.0 0.0 374.2281666486344 0.0 374.2281666486344 0.0 28.984484532805155 0.0 0.0 0 0.8494850021680094 0.0 0.7302046884880937 0.0 WTGDPN 4.7686 - 445 1 1.499 61535.3 1.0 3954 5247 9197 HBL1_DMSO_200M_050219_1,9203 HBL1_DMSO_200M_050219_1,9203,TQDGTWRTV True True TQDGTWRTV 48.186211 532.26182860136 4036341.0 9197.0 ENSG00000170779|ENST00000336219|CDCA4 9.024274826049805 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9204 48.196 574.0 180840.0 25 0 19923.0 + + 29094 QENSSDFQSNIA 12 135 670.2918824910457 1338.5692120488914 2 670.2927123904228 MULTI CID FTMS 0 0 0 9197 292886.90625 1.0 0 0.0 7 Unmodified _QENSFDSDRLE_ chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 12.240655878213236 0.7805268987462184 3 YYNSD{M(Oxidation (M))|F}QSD 9 -1 52.872 0.0 0.0 3.9499 0.0 0.0 0.0 216.12717038312888 216.12717038312888 20.14949544078032 0.0 0.0 0.0 0 0.0 2.0 0.0 1.7544321917401078 YYNSD{M(Oxidation (M))|F}QSD 3.9499 - 3576 1 1.499 81881.3 1.0 3955 5247 9197 HBL1_DMSO_200M_050219_1,9204 HBL1_DMSO_200M_050219_1,9204,QENSFDSDRLE False False QENSSDFQSNIA 48.19629 670.292712390423 2613668.75 9197.0 chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;;ENSG00000169045|ENST00000393432|HNRNPH1;;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 7.171933650970459 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9205 48.2 221.0 357420.0 25 0 27580.0 + 16456 KAINQGGLTSV 11 119 544.3086103981557 1086.6026678631113 2 544.3099853396416 MULTI CID FTMS 0 0 0 9197 278897.96875 0.0607584180105035 -2 0.1701774597167968 8 Unmodified _KAINQGGLTSV_ ENSG00000100902|ENST00000261479|PSMA6;ENST00000554843.5_1_14:35761682-35780127:+|nuORF;ENST00000556167.1_1_14:35761682-35777333:+|nuORF;nc|ENSG00000100902|P60900-2|PSMA6 96.36657018975838 0.0004425842802536 3 N{I|L}NQGG{I|L}TW 9 4 66.914 0.0 0.0 6.158 0.0 0.0 85.08989150215 0.0 85.08989150215 0.0 49.63335946306165 0.0 0.0 0 1.2302046884880935 0.0 0.3807196863200844 1.7931576817365436 N{I|L}NQGG{I|L}TW 6.158 - 1953 1 1.499 67583.6 1.0 3956 5247 9197 HBL1_DMSO_200M_050219_1,9205 HBL1_DMSO_200M_050219_1,9205,KAINQGGLTSV True True KAINQGGLTSV 48.200475 544.309985339642 51183124.0 9197.0 ENST00000554843.5_1_14:35761682-35780127:+|nuORF;;ENST00000556167.1_1_14:35761682-35777333:+|nuORF;;ENSG00000100902|ENST00000261479|PSMA6;;nc|ENSG00000100902|P60900-2|PSMA6;;chr14:35294529-35307994|40|30.73|0.0|21.55|+|2|TE_info:MIR,MIR_dup134546,MIR,SINE,donor,+,35294443,35294529|None,PSMA6|2;;chr14:35292877-35307994|18|30.89|0.0|21.56|+|2|None,PSMA6|1 6.997417132059733 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9206 48.207 339.0 246900.0 25 0 13573.0 15792 ISENASLGTV 10 132 495.7570838250613 0 495.7574951052666 PEAK CID FTMS 0 0 0 9197 150384.34375 0.6389467911349384 9 -0.91265869140625 9 Unmodified _ISENASLGTV_ ENSG00000204969|ENST00000526136|PCDHA2;nc|ENSG00000204969|Q9Y5H9-2|PCDHA2;nc|ENSG00000204969|Q9Y5H9-3|PCDHA2 18.1463463914782 0.3130158145628772 3 ENE 3 8 11.512 0.0 0.0 1.1634 0.0 0.0 546.2983645721945 68.05138574771718 614.3497503199117 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2215141619232908 0.0 ENE 1.1634 - 386 + 1 1.499 67728.9 1.0 3957 5247 9197 HBL1_DMSO_200M_050219_1,9206 HBL1_DMSO_200M_050219_1,9206,ISENASLGTV False True HPVLPARSI 48.20661 495.757495105267 8825139.0 9197.0 ENSG00000141452|ENST00000269221|RMC1;;ENST00000589215.5_1_18:21087981-21111645:+|nuORF 0.8139222661654154 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9207 48.214 429.0 500140.0 25 0 55321.0 + 3192 AVVPVNQGV 9 183 441.7556838437925 881.496814754385 2 441.7559387087822 MULTI CID FTMS 0 0 0 9197 145443.828125 0.3144278260437195 -2 0.1701774597167968 10 Unmodified _AVVPVNQGV_ ENSG00000101544|ENST00000262198|ADNP2 40.44857923139169 0.0729940656229577 3 {[VA]|[{I|L}G]}ANSVA 7 6 28.615 0.0 0.0 3.2462 0.0 0.0 0.0 266.14754652612254 266.14754652612254 5.806161207003495 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.3494850021680094 0.3807196863200844 {[VA]|[{I|L}G]}ANSVA 3.2462 - 1991 1 1.499 164805.4 1.0 3958 5247 9197 HBL1_DMSO_200M_050219_1,9207 HBL1_DMSO_200M_050219_1,9207,AVVPVNQGV True True AVVPVNQGV 48.214248 441.755938708782 2622861.5 9197.0 ENSG00000101544|ENST00000262198|ADNP2 5.168529828389485 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9208 48.228 800.0 87796.0 25 0 4580.4 + + -1 ASNDYTQQATQSY 13 107 759.8205209738886 1517.6264890145771 2 759.8228637576103 MULTI CID FTMS 0 0 0 9197 135990.171875 1.0 0 0.0 11 2 Carbamidomethyl (C) _AYLMC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))MFY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 6.723162845929126 0.8434276150410019 3 TQSY 4 -1 37.638 0.0 0.0 2.4801 0.0 0.0 1020.4160298007224 0.0 1020.4160298007224 0.0 5.867797617339701 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.25 TQSY 2.4801 - 1518 + 1 1.499 53562.5 0.9200000166893004 3959 5247 9197 HBL1_DMSO_200M_050219_1,9208 HBL1_DMSO_200M_050219_1,9208,AYLMCLFCMFY False False ASNDYTQQATQSY 48.228098 759.82286375761 954646.25 9197.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 7.251927216847737 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9209 48.242 800.0 52813.0 25 0 14068.0 -1 0 43 1145.827334083514 3434.4601728507423 3 1146.159472644329 MULTI CID FTMS 0 0 0 9197 108499.8125 1.0 0 0.0 12 3 E 1 -1 4.6041 0.0 0.0 0.13406 0.0 0.0 2778.23246396578 524.1624239557249 3302.394887921505 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.13406 - 7 + 1 1.499 41811.6 0.5799999833106995 3960 5247 9197 HBL1_DMSO_200M_050219_1,9209 HBL1_DMSO_200M_050219_1,9209, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9211 48.246 5.1 9370800.0 25 0 1058800.0 + 24964 MPPPPPQGV 9 68 460.2385793050109 918.462605676822 2 460.2390319705009 MULTI CID FTMS 0 0 0 9210 10777908.0 0.358029496195248 25 -2.420761108398437 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 59.79521254764295 0.0261954583213598 3 [VG]EHPPQR 8 6 + 45.869 0.0 0.0 4.9941 4.9941 77.745 0.0 0.0 0.0 3.1606124668105906 10.924778212679485 3.1606124668105906 3.1606124668105906 0 1.079689690656103 1.6989700043360187 0.0 0.0 [VG]EHPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQR;[VG]EPHPQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR 4.9941;4.65;4.2518;1.4912;1.4433 -;-;-;-;- 104 1 1.499 41471.7 1.0 3961 5248 9210 HBL1_DMSO_200M_050219_1,9211 HBL1_DMSO_200M_050219_1,9211,MPPPPPQGV True True MPPPPPQGV 48.246239 460.239031970501 2531406400.0 9210.0 ENSG00000164754|ENST00000297338|RAD21;;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 7.514672756195068 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9212 48.247 12.0 4410700.0 25 0 1217800.0 + 39132 TYIDKSTQL 9 76 534.7823719448194 1067.5501909564389 2 534.7823974490166 MULTI CID FTMS 0 0 0 9210 4751605.0 1.0 0 0.0 2 Unmodified _TYIDKSTQL_ ENSG00000119965|ENST00000481909|C10orf88 52.268347100219714 0.0353964759249114 3 [YT]{I|L}D 4 5 46.995 0.0 0.0 4.4021 0.0 0.0 0.0 572.3073824518186 572.3073824518186 1.697697971247294 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.0 + [YT]{I|L}D 4.4021 + + 227 + 1 1.499 46114.8 1.0 3962 5248 9210 HBL1_DMSO_200M_050219_1,9212 HBL1_DMSO_200M_050219_1,9212,TYIDKSTQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9213 48.249 22.0 2095200.0 25 0 219080.0 + 41635 VPPPSAQEI 9 82 469.25301885211206 936.491484771024 2 469.2530090212822 MULTI CID FTMS 0 0 0 9210 2401819.5 0.2068568376791605 7 -0.71917724609375 3 Unmodified _VPPPSAQEI_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 32.30548876998284 0.1201446275138228 3 [VP]P[PS]AQE{I|L} 9 0 + 49.804 0.0 0.0 5.3181 5.3181 85.478 0.0 0.0 0.0 12.191512336730028 23.86168767277148 12.191512336730028 9.208187539523747 0 0.4247425010840047 1.5228787452803376 0.3494850021680094 0.0 + + [VP]P[PS]AQE{I|L};[VP]P[PS]A[AG]E{I|L};{[HG]|PP}ASPVQE{I|L};[VP]P[QT][PG]E{I|L};[VP]P[PS][DN]V{I|L};{[HG]|PP}ASPQVE{I|L};{[HG]|PP}ASQEPV{I|L};{[HG]|PP}[PS]AVQE{I|L};{[HG]|PP}ASQPVE{I|L};{[HG]|PP}[PS]VAQE{I|L} 5.3181;4.3349;3.7437;3.719;3.3159;3.2342;3.1854;3.0273;2.9973;2.9456 +;-;-;-;-;-;-;-;-;- + 485 1 1.499 44356.1 1.0 3963 5248 9210 HBL1_DMSO_200M_050219_1,9213 HBL1_DMSO_200M_050219_1,9213,VPPPSAQEI True True VPPPSAQEI 48.248596 469.253009021282 272534760.0 9210.0 nc|ENSG00000051108|Q15011-4|HERPUD1;;nc|ENSG00000051108|Q15011-2|HERPUD1;;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;;ENSG00000051108|ENST00000439977|HERPUD1 4.823331356048584 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9214 48.25 22.0 2406800.0 25 0 217580.0 + 12943 HAFKISKI 8 83 472.2897910998571 942.5650292665142 2 472.2897521853447 MULTI CID FTMS 0 0 0 9210 1938543.375 0.5064921182601935 2 -0.1888504028320312 4 Unmodified _HAFKISKI_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4 26.88365393820708 0.4786498634179528 3 [HA]{M(Oxidation (M))|F} 3 5 25.942 0.0 0.0 2.7523 0.0 0.0 0.0 584.3773516144236 584.3773516144236 7.983324797206279 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 + [HA]{M(Oxidation (M))|F} 2.7523 + + 49 1 1.499 44170.2 1.0 3964 5248 9210 HBL1_DMSO_200M_050219_1,9214 HBL1_DMSO_200M_050219_1,9214,HAFKISKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9215 48.251 28.0 1752300.0 25 0 336940.0 + 36429 SYYGNRAATL 10 56 558.2772319818401 1114.5399110304802 2 558.2777587771416 MULTI CID FTMS 0 0 0 9210 1891571.875 0.7278159013170697 1 -0.0966644287109375 5 Unmodified _SYYGNRAATL_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 29.84058131909904 0.2982332456971691 3 SGY[MT] 5 7 28.188 0.0 0.0 2.5291 0.0 0.0 557.3400746076187 0.0 557.3400746076187 0.0 10.6246936830415 0.0 0.0 0 0.4247425010840047 0.0 0.7742275032520141 0.0 SGY[MT] 2.5291 - 25 1 1.499 42021.4 1.0 3965 5248 9210 HBL1_DMSO_200M_050219_1,9215 HBL1_DMSO_200M_050219_1,9215,SYYGNRAATL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9216 48.252 43.0 1393100.0 25 0 227220.0 + 40589 VKTSQVAV 8 68 416.2491936048219 0 416.2491332888603 PEAK CID FTMS 0 0 0 9210 1814950.125 0.980426383755914 1 -0.0966644287109375 6 Unmodified _VKTSQVAV_ REV__ENSG00000104823|ENST00000221418|ECH1;REV__ENST00000601333.1_1_19:39306255-39306727:-|nuORF 11.640296217721598 0.5231213682848052 3 Q 1 -1 3.0989 0.0 0.0 0.37315 0.0 0.0 287.18337148523136 412.2168891790745 699.4002606643058 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.37315 + + 7 + 1 1.499 50728.1 1.0 3966 5248 9210 HBL1_DMSO_200M_050219_1,9216 HBL1_DMSO_200M_050219_1,9216,VKTSQVAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9217 48.253 24.0 2537200.0 25 0 310760.0 + 33594 SIPENVSTHV 10 79 541.7783692126796 1081.5421854921592 2 541.7779418826103 MULTI CID FTMS 0 0 0 9210 1378018.875 0.7356363694600313 -1 0.0721893310546875 7 Unmodified _SIPENVSTHV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 24.99096001346401 0.4071966087057876 3 {[TV]|[{I|L}S]}PED 5 6 42.193 0.0 0.0 3.9012 0.0 0.0 0.0 537.2736910455686 537.2736910455686 23.15166884247504 0.0 0.0 0.0 0 0.25 1.6989700043360187 0.3494850021680094 0.0 {[TV]|[{I|L}S]}PED 3.9012 - 278 + 1 1.499 53040.9 1.0 3967 5248 9210 HBL1_DMSO_200M_050219_1,9217 HBL1_DMSO_200M_050219_1,9217,SIPENVSTHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9218 48.255 60.0 669450.0 25 0 55638.0 + 36973 TFQQNASSM 9 77 507.71336082882016 1013.4121687244404 2 507.7137328982353 MULTI CID FTMS 0 0 0 9210 852815.125 0.0310846243842597 7 -0.71917724609375 8 Unmodified _TFEWVDSM_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 14.581692164780916 0.6954967302934248 3 SM 2 6 22.959 0.0 0.0 2.2655 0.0 0.0 777.3289605718998 0.0 777.3289605718998 0.0 13.043966869934652 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + SM 2.2655 + + 73 + 1 1.499 36732.8 1.0 3968 5248 9210 HBL1_DMSO_200M_050219_1,9218 HBL1_DMSO_200M_050219_1,9218,TFEWVDSM False False TFQQNASSM 48.254818 507.713732898235 0.0 9210.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 0.0022872686386108 2.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 9219 48.257 99.0 628730.0 25 0 49438.0 + -1 VVAGVANALAHK 12 82 575.3411291287134 1148.6677053242267 2 575.3412963747978 MULTI CID FTMS 0 0 0 9210 491405.78125 1.0 0 0.0 9 Oxidation (M) _VVGAGLVKLM(Oxidation (M))F_ ENSG00000244734|ENST00000335295|HBB;ENSG00000223609|ENST00000650601|HBD 18.1463463914782 0.6576820063886638 3 VVAGVANA{I|L}AHK 12 -1 + 77.984 0.0 0.0 6.7891 6.7891 87.757 0.0 0.0 0.0 55.93228389375341 9.662547829577449 9.662547829577449 6.854089466986324 0 1.25 2.0 0.0 0.3494850021680094 VVAGVANA{I|L}AHK;VVQVANA{I|L}AHK;VVAGVAGGA{I|L}AHK;VVARANA{I|L}AHK;VVAGVQQ{I|L}AHK;VVQVAGGA{I|L}AHK;VVQVQQ{I|L}AHK;VVARAGGA{I|L}AHK;VVAG{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L}AHK;VVARQQ{I|L}AHK 6.7891;6.1924;5.997;5.7782;5.7497;5.3977;5.1562;4.9835;4.8431;4.742 -;-;-;-;-;-;-;-;-;- 709 + 1 1.499 52043.8 1.0 3969 5248 9210 HBL1_DMSO_200M_050219_1,9219 HBL1_DMSO_200M_050219_1,9219,VVGAGLVKLMF False False VVAGVANALAHK 48.256962 575.341296374798 3597788.0 9210.0 ENSG00000244734|ENST00000335295|HBB;;ENSG00000223609|ENST00000650601|HBD 8.83244530359904 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9220 48.26 125.0 557290.0 25 0 99189.0 + 22513 LPVWASLLL 9 100 337.87810075397203 1010.6124728621162 3 337.8778869509697 MULTI CID FTMS 0 0 0 9210 455871.53125 0.0565781663334419 10 -1.0460662841796875 10 Unmodified _LPVWASLLL_ REV__ENST00000340437.8_1_11:61171383-61171542:-|nuORF 28.486842064014134 0.1687311288560894 3 AS{I|L}A[RH]{I|L} 7 -1 21.648 0.0 0.0 2.1421 0.0 0.0 244.1785042598197 0.0 244.1785042598197 0.0 1.7263072694617383 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 AS{I|L}A[RH]{I|L} 2.1421 - 133 + 1 1.499 65516.4 1.0 3970 5248 9210 HBL1_DMSO_200M_050219_1,9220 HBL1_DMSO_200M_050219_1,9220,LPVWASLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9221 48.269 562.0 499020.0 25 0 129670.0 + -1 VFVVGTER 8 176 453.343815139518 452.336538672918 1 453.3432494997978 MULTI CID FTMS 0 0 0 9210 372299.0 0.0164541295379687 22 -2.246959686279297 11 nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000196275|Q86UP8-2|GTF2IRD2;nc|ENSG00000196275|Q86UP8-3|GTF2IRD2;ENST00000457594.2_7:74237150-74267816:-|nuORF;nc|ENSG00000263001|P78347-5|GTF2I;ENSG00000174428|ENST00000472837|GTF2IRD2B;nc|ENSG00000196275|Q86UP8-5|GTF2IRD2;nc|ENSG00000196275|Q86UP8-4|GTF2IRD2;nc|ENSG00000263001|P78347-4|GTF2I;ENSG00000263001|ENST00000573035|GTF2I;nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B;ENSG00000196275|ENST00000451013|GTF2IRD2 3 {I|L}{I|L} 2 -1 19.776 0.0 0.0 4.372 0.0 0.0 208.15747267890785 0.0 208.15747267890785 0.0 7.012087149992503 0.0 0.0 0 0.2302046884880938 0.0 0.0 0.0 {I|L}{I|L} 4.372 - 71 1 1.499 217786.5 1.0 3971 5248 9210 HBL1_DMSO_200M_050219_1,9221 HBL1_DMSO_200M_050219_1,9221, False False VFVVGTER 48.269371 453.343249499798 191374.234375 9210.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000196275|Q86UP8-2|GTF2IRD2;;nc|ENSG00000196275|Q86UP8-3|GTF2IRD2;;ENST00000457594.2_7:74237150-74267816:-|nuORF;;nc|ENSG00000263001|P78347-5|GTF2I;;ENSG00000174428|ENST00000472837|GTF2IRD2B;;nc|ENSG00000196275|Q86UP8-5|GTF2IRD2;;nc|ENSG00000196275|Q86UP8-4|GTF2IRD2;;nc|ENSG00000263001|P78347-4|GTF2I;;ENSG00000263001|ENST00000573035|GTF2I;;nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B;;ENSG00000196275|ENST00000451013|GTF2IRD2 1.8688850402832031 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9222 48.272 156.0 550810.0 25 0 25892.0 + 39150 TYNHPSTVL 9 138 516.2614406525612 1030.5083283719223 2 516.2615234255791 MULTI CID FTMS 0 0 0 9210 354701.65625 0.0582077091869781 11 -1.2002830505371094 12 Unmodified _TYNHPSTVL_ REV__ENSG00000100802|ENST00000299088|C14orf93;REV__nc|nan|Q9H972-2|C14orf93 22.736283301280096 0.2418982879461534 3 YTS 3 -1 50.802 0.0 0.0 4.9298 0.0 0.0 0.0 676.3443429110368 676.3443429110368 13.531055091869456 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.0 YTS 4.9298 - 918 + 1 1.499 72151.0 1.0 3972 5248 9210 HBL1_DMSO_200M_050219_1,9222 HBL1_DMSO_200M_050219_1,9222,TYNHPSTVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9223 48.285 700.0 328510.0 25 0 41880.0 + 3589 DAAKQINI 8 191 436.7455089976272 871.4764650620543 2 436.7456542849541 MULTI CID FTMS 0 0 0 9210 259895.578125 0.5414818003664674 -1 0.0721893310546875 13 Unmodified _DAAKQINI_ ENSG00000090104|ENST00000367459|RGS1 78.14939416004806 0.0999748067387998 3 {[DA]|[EG]}AKQ{I|L}D 7 2 70.07 0.0 0.0 8.0404 0.0 0.0 0.0 127.09027302180108 127.09027302180108 50.00289024579577 0.0 0.0 0.0 0 1.174742501084005 2.0 1.504703965650411 0.0 {[DA]|[EG]}AKQ{I|L}D 8.0404 - 1498 1 1.499 180137.1 1.0 3973 5248 9210 HBL1_DMSO_200M_050219_1,9223 HBL1_DMSO_200M_050219_1,9223,DAAKQINI True True DAAKQINI 48.284612 436.745654284954 2510635.25 9210.0 ENSG00000090104|ENST00000367459|RGS1 2.7428555885950723 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9224 48.298 800.0 313440.0 25 0 20054.0 26986 PEGTPQRI 8 266 449.2434043140111 896.4722556948223 2 449.2429992556572 MULTI CID FTMS 0 0 0 9210 185013.015625 0.7595634921220397 -1 0.0721893310546875 14 Unmodified _PEGTPQRI_ ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 39.957323273325 0.2350051964751539 3 [EP]GARPSA{I|L} 9 4 + 59.056 0.0 0.0 6.5876 6.5876 88.156 0.0 0.0 0.0 35.47569463554474 14.973024840566469 14.973024840566469 8.27082932897892 0 1.447621246364342 1.6989700043360187 0.0 0.0 [EP]GARPSA{I|L};[EP]GARPAS{I|L};[EP]QRPSA{I|L};[EP]GA[VG]PSA{I|L};[EP]QRPAS{I|L};[EP]GA[VG]PAS{I|L};[EP]Q[VG]PSA{I|L};[EP]GARPATV;[EP]G[KQ][EP]{I|L};[EP]GAR[TA]PV 6.5876;5.665;5.5733;5.5604;4.6507;4.6378;4.5401;4.1838;4.0472;3.9187 -;-;-;-;-;-;-;-;-;- 787 + 1 1.499 191524.7 0.9700000286102296 3974 5248 9210 HBL1_DMSO_200M_050219_1,9224 HBL1_DMSO_200M_050219_1,9224,PEGTPQRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9225 48.311 725.0 321860.0 25 0 28066.0 + 43908 YFYTESDEDYQ 11 157 730.28124214656 1458.54793135992 2 730.2801391482353 MULTI CID FTMS 0 0 0 9210 170604.078125 0.1985320247425967 -3 0.2423667907714843 15 Unmodified _YFYTESDEDYQ_ REV__ENSG00000154813|ENST00000488423|DPH3;REV__nc|ENSG00000154813|Q96FX2-2|DPH3 26.268140514670165 0.4754186812857754 3 [QA]HDE[MD]YDHQA 12 -1 + 64.994 0.0 0.0 4.4561 4.4561 72.186 0.0 0.0 0.0 2.3740619225121407 36.14007808576609 2.3740619225121407 0.9691001300805624 0 1.805462187404089 0.0 0.0 1.360924374808178 [QA]HDE[MD]YDHQA;[QA]HDE[MD]YDQHA;[AG]AHDE[MD]YDHQA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GDD[QA]SAEAYQA;[QA]HDEAQWW[DC]A;[AG]AHDE[MD]YDQHA;[QA]HDE[MD]YDH[AG]A;[QA]HDE[MD]YD[AG]HA;[HD][HC]{NN|[MP]|[D{I|L}]|[EV]}SAEAYQA;[QA]HDE[MD][HD]YQA 4.4561;4.3896;4.0114;4.0033;3.9922;3.945;3.8323;3.7659;3.7357;3.7312 -;-;-;-;-;-;-;-;-;- 5676 1 1.499 165614.1 1.0 3975 5248 9210 HBL1_DMSO_200M_050219_1,9225 HBL1_DMSO_200M_050219_1,9225,YFYTESDEDYQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9226 48.324 755.0 346370.0 25 0 34470.0 + + 12158 NAMDNTVRV 9 264 510.2536372117781 0 510.2546264529228 PEAK CID FTMS 0 0 0 9210 202330.3125 1.0 0 0.0 16 Unmodified _GQMTHVFLS_ ENST00000489853.1_1_1:31732921-31754364:-|nuORF;ENSG00000060688|ENST00000263694|SNRNP40;nc|ENSG00000060688|Q96DI7-2|SNRNP40 34.10243960390752 0.0907105591560806 3 AMDNTVR 7 -1 25.607 0.0 0.0 2.5142 0.0 0.0 114.04510293742494 114.05658136539296 228.1016843028179 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.2887254899964357 AMDNTVR 2.5142 - 667 + 1 1.499 200706.9 1.0 3976 5248 9210 HBL1_DMSO_200M_050219_1,9226 HBL1_DMSO_200M_050219_1,9226,GQMTHVFLS False False NAMDNTVRV 48.324072 510.254626452923 568034.625 9210.0 ENST00000489853.1_1_1:31732921-31754364:-|nuORF;;ENSG00000060688|ENST00000263694|SNRNP40;;nc|ENSG00000060688|Q96DI7-2|SNRNP40 6.4433333079020185 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9227 48.339 759.0 385000.0 25 0 15863.0 + 8864 FAATGGTV 8 163 723.3654668897775 722.3581904231775 1 723.2858154177666 MULTI CID FTMS 0 0 0 9210 27444.193359375 0.1201504096157082 -2 0.1729660034179687 17 Unmodified _FAATGGTV_ REV__ENSG00000084774|ENST00000264705|CAD 49.66892048692302 0.1408045912742846 3 [YQ]VNS{I|L} 6 -1 + 53.628 0.0 0.0 7.424 7.424 90.756 0.0 0.0 0.0 8.602210727683541 16.970862912880293 8.602210727683541 8.602210727683541 0 0.9308845489566888 1.5228787452803376 0.2614393726401688 0.7302046884880937 [YQ]VNS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GVNS{I|L};[YQ]VGGS{I|L};[AG]YVNS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GVGGS{I|L};[AG]YVGGS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[TA]NS{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}[TA]S{I|L};[NS][R{M(Oxidation (M))|F}]S{I|L};[AG]N[YV]S{I|L} 7.424;6.2331;6.1199;5.8312;4.3534;3.9515;3.4082;2.8737;2.8282;2.4195 -;-;-;-;-;-;-;-;-;- 756 1 1.499 199907.5 1.0 3977 5248 9210 HBL1_DMSO_200M_050219_1,9227 HBL1_DMSO_200M_050219_1,9227,FAATGGTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9229 48.343 9.4 5170000.0 25 0 630490.0 10368 FSNHTGYAHW 10 59 407.1791915734353 1218.515745320506 3 407.1792785525322 MULTI CID FTMS 0 0 0 9228 4814948.0 1.0 0 0.0 1 Unmodified _FSNHTGYAHW_ ENSG00000160209|ENST00000291565|PDXK;nc|ENSG00000160209|O00764-2|PDXK 13.90604991867851 0.6142120002215601 3 PY 2 9 14.464 0.0 0.0 1.187 0.0 0.0 348.1437935837909 607.2339883845169 955.3777819683078 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 PY 1.187 - 45 + 1 1.496 47443.7 1.0 3978 5249 9228 HBL1_DMSO_200M_050219_1,9229 HBL1_DMSO_200M_050219_1,9229,FSNHTGYAHW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9230 48.344 12.0 4627900.0 25 0 820410.0 -1 MLTYRCSGCI 10 55 610.2651384056611 1218.515723878122 2 610.2655517458916 MULTI CID FTMS 0 0 0 9228 4902727.0 1.0 0 0.0 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LTYRCSGC(Carbamidomethyl (C))I_ ENSG00000249961|ENST00000433154|TERB1 13.90604991867851 0.6142120002215601 3 {[QG]|[NA]}YPY 5 -1 48.456 0.0 0.0 3.9766 0.0 0.0 0.0 607.2329805963499 607.2329805963499 42.97106248532352 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[QG]|[NA]}YPY 3.9766 - 23 + 1 1.496 47592.4 1.0 3979 5249 9228 HBL1_DMSO_200M_050219_1,9230 HBL1_DMSO_200M_050219_1,9230,MLTYRCSGCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9231 48.345 16.0 3318300.0 25 0 570610.0 + 38941 TVMGAEIRHV 10 57 556.7974129378122 1111.5802729424242 2 556.7974731326103 MULTI CID FTMS 0 0 0 9228 3516630.5 1.0 0 0.0 3 Unmodified _TVMGAELRHV_ ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENSG00000092841|ENST00000550697|MYL6;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 18.373094154950223 0.5392593366289069 3 {[TV]|[{I|L}S]}MGAE[R{I|L}][HV] 10 0 + 56.923 0.0 0.0 5.121 5.121 81.07 0.0 0.0 0.0 47.97106248532352 4.259687322722812 4.259687322722812 5.7352282311924085 0 0.4247425010840047 2.0 0.0 0.0 + + {[TV]|[{I|L}S]}MGAE[R{I|L}][HV];{[TV]|[{I|L}S]}VC(Carbamidomethyl (C))E[R{I|L}][HV];{[TV]|[{I|L}S]}MQE[R{I|L}][HV];{[TV]|[{I|L}S]}V[CG]E[R{I|L}][HV] 5.121;4.605;4.5333;3.7766 +;-;-;- + 46 + 1 1.496 48246.7 1.0 3980 5249 9228 HBL1_DMSO_200M_050219_1,9231 HBL1_DMSO_200M_050219_1,9231,TVMGAELRHV False True TVMGAEIRHV 48.345259 556.79747313261 37361368.0 9228.0 ENST00000548725.5_1_12:56552185-56553955:+|nuORF;;ENSG00000092841|ENST00000550697|MYL6;;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;;nc|ENSG00000092841|P60660-2|MYL6 8.257096926371256 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9232 48.346 9.3 6505400.0 25 0 1173300.0 + 36320 SYLPHSSEY 9 84 541.7430020809127 1081.4714512286253 2 541.7432128787041 MULTI CID FTMS 0 0 0 9228 3274427.5 0.6820636208954592 -1 0.0966644287109375 4 Unmodified _SYLPHSSEY_ ENSG00000119927|ENST00000348367|GPAM 28.486842064014134 0.1687311288560894 3 [YE]VDDP{I|L} 7 8 26.713 0.0 0.0 2.47 0.0 0.0 0.0 247.07144802843007 247.07144802843007 13.217969668064882 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.0994850021680094 0.0 [YE]VDDP{I|L} 2.47 - 217 1 1.496 55215.3 1.0 3981 5249 9228 HBL1_DMSO_200M_050219_1,9232 HBL1_DMSO_200M_050219_1,9232,SYLPHSSEY False True SYLPHSSEY 48.346439 541.743212878704 54200320.0 9228.0 ENSG00000119927|ENST00000348367|GPAM 7.1468377113342285 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9233 48.348 32.0 2153400.0 25 0 414100.0 + 42151 SVVGPVKGV 9 77 421.26047917199367 840.5064054107874 2 421.2602416872978 MULTI CID FTMS 0 0 0 9228 2249092.75 0.9054201999008064 -1 0.0966644287109375 5 Unmodified _VSALKGLPG_ nc|ENSG00000170322|Q6P4R8-3|NFRKB;ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB 25.399314129420983 0.2080152500878129 3 [VS]VG[VP][KG]V 9 6 + 43.957 0.0 0.0 5.2298 5.2298 88.458 0.0 0.0 0.0 11.561060344227164 0.0166728945909611 0.0166728945909611 25.08288552534079 0 0.7742275032520141 2.0 0.0 0.3494850021680094 [VS]VG[VP][KG]V;[VP]KR[WR];[KP]VR[WR];{[QV]|[N{I|L}]|[RA]|[KV]}PR[WR] 5.2298;2.2455;0.97614;0.90714 -;-;-;- 298 + 1 1.496 59792.5 1.0 3982 5249 9228 HBL1_DMSO_200M_050219_1,9233 HBL1_DMSO_200M_050219_1,9233,VSALKGLPG False False SVVGPVKGV 48.347616 421.260241687298 12381395.0 9228.0 nc|ENSG00000170322|Q6P4R8-3|NFRKB;;ENSG00000170322|ENST00000682444|NFRKB;;nc|ENSG00000170322|Q6P4R8-2|NFRKB 5.436817328135173 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9234 48.349 33.0 1529900.0 25 0 159930.0 + 3382 AYQQRVTAL 9 78 525.290444346138 1048.566335759076 2 525.2903930544853 MULTI CID FTMS 0 0 0 9228 1941480.25 0.6656467008624781 1 -0.0921859741210937 6 Unmodified _AYQQRVTAL_ ENSG00000135968|ENST00000309863|GCC2;ENST00000393321.2_3_2:109102933-109106471:+|nuORF 75.76082778847304 0.0188720312721366 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQRVTA{I|L} 9 0 + 86.903 0.0 0.0 8.2878 8.2878 93.581 0.0 0.0 0.0 75.93372183701504 14.973024840566469 14.973024840566469 9.208187539523747 0 2.004432191740108 2.0 0.75 0.3494850021680094 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQRVTA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[AG]RVTA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]QRVTA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQRV[VS]V 8.2878;7.4096;7.4096;5.2599 +;-;-;- + 130 + 1 1.496 42581.3 1.0 3983 5249 9228 HBL1_DMSO_200M_050219_1,9234 HBL1_DMSO_200M_050219_1,9234,AYQQRVTAL True True AYQQRVTAL 48.348795 525.290393054485 18271822.0 9228.0 ENST00000393321.2_3_2:109102933-109106471:+|nuORF;;ENSG00000135968|ENST00000309863|GCC2 8.135965824127197 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9235 48.35 33.0 1106600.0 25 0 61570.0 + 26216 NQIKKIENL 9 73 550.3266807049724 1098.6388084767448 2 550.3268310427666 MULTI CID FTMS 0 0 0 9228 1614227.75 1.0 0 0.0 7 Unmodified _NQIKKIENL_ ENSG00000115685|ENST00000234038|PPP1R7;nc|ENSG00000115685|Q15435-2|PPP1R7;nc|ENSG00000115685|Q15435-3|PPP1R7;nc|ENSG00000115685|Q15435-4|PPP1R7;nc|ENSG00000115685|Q15435-5|PPP1R7 38.17557092003332 0.0854718145212029 3 K{I|L}[HS] 4 7 30.005 0.0 0.0 2.7311 0.0 0.0 615.3594837873062 0.0 615.3594837873062 0.0 19.035984316004217 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 K{I|L}[HS] 2.7311 - 32 1 1.496 33628.1 1.0 3984 5249 9228 HBL1_DMSO_200M_050219_1,9235 HBL1_DMSO_200M_050219_1,9235,NQIKKIENL True True NQIKKIENL 48.349974 550.326831042767 7873221.0 9228.0 ENSG00000115685|ENST00000234038|PPP1R7;;nc|ENSG00000115685|Q15435-4|PPP1R7;;nc|ENSG00000115685|Q15435-3|PPP1R7;;nc|ENSG00000115685|Q15435-5|PPP1R7;;nc|ENSG00000115685|Q15435-2|PPP1R7 6.375056266784668 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9236 48.351 42.0 1589300.0 25 0 162710.0 + 4893 DGIKVVKV 8 89 429.2762526618124 856.5379523904247 2 429.2761718630791 MULTI CID FTMS 0 0 0 9228 1321321.625 1.0 0 0.0 8 Unmodified _DGIKVVKV_ ENSG00000134291|ENST00000429772|TMEM106C;ENST00000547136.1_1_12:48359585-48360048:+|nuORF;ENST00000551305.5_1_12:48359585-48359975:+|nuORF;nc|ENSG00000134291|Q9BVX2-2|TMEM106C 45.69961567697781 0.159474709770503 3 DG{I|L}KVVKV 8 0 + 41.543 0.0 0.0 4.8501 4.8501 78.585 0.0 0.0 0.0 5.015996459590909 4.259687322722812 4.259687322722812 4.259687322722812 0 1.6573871488943874 0.744727494896694 0.0 0.0 + + DG{I|L}KVVKV;DG{I|L}KVVVK;V{[DA]|[EG]}KVVKV;V{[DA]|[EG]}KVVVK 4.8501;4.3528;4.2645;3.7671 +;-;-;- + 104 + 1 1.496 57552.6 1.0 3985 5249 9228 HBL1_DMSO_200M_050219_1,9236 HBL1_DMSO_200M_050219_1,9236,DGIKVVKV False True DGIKVVKV 48.351159 429.276171863079 6513142.0 9228.0 ENSG00000134291|ENST00000429772|TMEM106C;;nc|ENSG00000134291|Q9BVX2-2|TMEM106C;;ENST00000547136.1_1_12:48359585-48360048:+|nuORF;;ENST00000551305.5_1_12:48359585-48359975:+|nuORF 3.0511085987091064 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9237 48.352 28.0 1019300.0 25 0 51466.0 + -1 RFKDRIVSM 9 67 384.5469168097168 1150.6189210293503 3 384.5480834841728 MULTI CID FTMS 0 0 0 9228 1229743.125 0.5817131838775025 2 -0.1734695434570312 9 Oxidation (M) _VGEVKFVRM(Oxidation (M))A_ ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;nc|ENSG00000118007|Q8WVM7-2|STAG1;ENSG00000118007|ENST00000383202|STAG1 6.1918466704503565 0.6979955778746556 3 SM 2 -1 15.573 0.0 0.0 1.3535 0.0 0.0 914.5353619246612 0.0 914.5353619246612 0.0 5.115618994235687 0.0 0.0 0 0.0 0.0 0.0 0.0 SM 1.3535 - 17 + 1 1.496 29754.6 1.0 3986 5249 9228 HBL1_DMSO_200M_050219_1,9237 HBL1_DMSO_200M_050219_1,9237,VGEVKFVRMA False False RFKDRIVSM 48.352339 384.548083484173 5432370.5 9228.0 ENSG00000101972|ENST00000371145|STAG2;;nc|ENSG00000101972|Q8N3U4|STAG2;;nc|ENSG00000118007|Q8WVM7-2|STAG1;;ENSG00000118007|ENST00000383202|STAG1 4.496792316436768 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9238 48.355 140.0 510550.0 25 0 91683.0 + 15614 IQDDAVHTL 9 123 506.2587028482377 1010.5028527632752 2 506.2591430544853 MULTI CID FTMS 0 0 0 9228 679952.5625 1.0 0 0.0 10 Unmodified _IQDDAVHTL_ ENSG00000115816|ENST00000234170|CEBPZ 81.89019881105858 0.0170587746866453 3 {I|L}QDDAVHT{I|L} 9 0 + 59.951 0.0 0.0 5.9328 5.9328 89.999 0.0 0.0 0.0 28.118683939880555 12.71248849257681 12.71248849257681 16.23208470553547 0 0.7134679910804405 0.638272163982407 1.426935982160881 0.3807196863200844 + + {I|L}QDDAVHT{I|L};{I|L}Q[WD]VHT{I|L};{I|L}[AG]DDAVHT{I|L};{I|L}QDDA[HS]{I|L}{I|L};{I|L}[AG][WD]VHT{I|L};{I|L}QD{[CT]|[{M(Oxidation (M))|F}G]}[YR]{I|L};{I|L}Q[WD][HS]{I|L}{I|L};{I|L}QD{[CT]|[{M(Oxidation (M))|F}G]}[R{I|L}]Y;{I|L}[AG]DDA[HS]{I|L}{I|L};{I|L}[YT][YT]HT{I|L} 5.9328;4.3264;4.0131;3.7143;2.4015;2.1863;2.1079;2.0827;1.7946;1.1062 +;-;-;-;-;-;-;-;-;- + 467 + 1 1.496 59504.1 1.0 3987 5249 9228 HBL1_DMSO_200M_050219_1,9238 HBL1_DMSO_200M_050219_1,9238,IQDDAVHTL True True IQDDAVHTL 48.355145 506.259143054485 3438034.25 9228.0 ENSG00000115816|ENST00000234170|CEBPZ 6.253174146016439 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9239 48.357 87.0 495840.0 25 0 33438.0 + 39463 VAPVTHVSV 9 91 454.764014776286 907.513476619372 2 454.7646362185478 MULTI CID FTMS 0 0 0 9228 532351.1875 0.5353846770803372 -1 0.0966644287109375 11 Unmodified _VAPVTHVSV_ ENSG00000120690|ENST00000239882|ELF1 23.1484247019978 0.2366544122328345 3 {[VA]|[{I|L}G]}[HV]QQKV 8 5 + 22.584 0.0 0.0 2.4886 2.4886 66.529 0.0 0.0 0.0 0.3487179211534013 4.436974992327126 0.3487179211534013 0.3487179211534013 0 0.3252574989159953 2.0 0.0 0.0 {[VA]|[{I|L}G]}[HV]QQKV;{[VA]|[{I|L}G]}[HV]VD[R{I|L}];{[VA]|[{I|L}G]}[KS][YN]KV;[HV]TPVS[R{I|L}];{[VA]|[{I|L}G]}[KS][KG][YR];[PS][H{I|L}]VS[R{I|L}];{[VA]|[{I|L}G]}[KS]{[NV]|[RG]}[YK];[HV]TVPS[R{I|L}];{[VA]|[{I|L}G]}[KS]{[NV]|[RG]}P{[HG]|PP};[VG][H{I|L}]VD[R{I|L}] 2.4886;2.4501;2.3509;2.0992;1.9997;1.7985;1.6679;1.6298;1.4506;1.2862 -;-;-;-;-;-;-;-;-;- 202 + 1 1.496 39977.9 1.0 3988 5249 9228 HBL1_DMSO_200M_050219_1,9239 HBL1_DMSO_200M_050219_1,9239,VAPVTHVSV False False VAPVTHVSV 48.35708 454.764636218548 4611864.0 9228.0 ENSG00000120690|ENST00000239882|ELF1 0.907610813776652 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9240 48.359 70.0 464990.0 25 0 31685.0 + 2186 AQAPDLQRV 9 73 499.274702651945 996.53485237069 2 499.2742797732353 MULTI CID FTMS 0 0 0 9228 509249.03125 0.9426516071962818 1 -0.0921859741210937 12 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 21.53697664764585 0.2571576504437394 3 [QA]APD 5 4 36.242 0.0 0.0 3.6368 0.0 0.0 0.0 511.2991605988786 511.2991605988786 30.75720713938118 0.0 0.0 0.0 0 1.0 0.8538719643217619 0.0 0.0 + [QA]APD 3.6368 + + 58 + 1 1.496 32278.0 1.0 3989 5249 9228 HBL1_DMSO_200M_050219_1,9240 HBL1_DMSO_200M_050219_1,9240,AQAPDLQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9241 48.366 404.0 380360.0 25 0 51937.0 + -1 PDNFAKGCDSC 11 99 635.7464141330641 1269.4782753329282 2 635.7466308474541 MULTI CID FTMS 0 0 0 9228 473853.4375 0.5336442387695752 -1 0.0966644287109375 13 2 Carbamidomethyl (C) _PDNFAKGC(Carbamidomethyl (C))DSC(Carbamidomethyl (C))_ REV__ENSG00000130803|ENST00000247956|ZNF317;REV__ENST00000590152.1_1_19:9267931-9272106:+|nuORF;REV__ENST00000591278.5_1_19:9268612-9272106:+|nuORF;REV__nc|ENSG00000130803|Q96PQ6-2|ZNF317;REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317;REV__nc|ENSG00000130803|Q96PQ6-4|ZNF317 15.248480904072842 0.7179608125786238 3 YYSPS 5 -1 76.498 0.0 0.0 6.0259 0.0 0.0 0.0 669.213425981119 669.213425981119 58.59312225794824 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.079689690656103 0.0 YYSPS 6.0259 - 396 + 1 1.496 115742.7 1.0 3990 5249 9228 HBL1_DMSO_200M_050219_1,9241 HBL1_DMSO_200M_050219_1,9241,PDNFAKGCDSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9242 48.374 480.0 164940.0 25 0 7079.5 + 29640 QMYEHFQEA 9 116 591.7477798032013 1181.4810066732025 2 591.7470580935478 MULTI CID FTMS 0 0 0 9228 339613.84375 1.0 0 0.0 14 Unmodified _QMYEHFQEA_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 30.63653989081413 0.1413794767160703 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SMYEQA 8 5 40.48 0.0 0.0 3.4262 0.0 0.0 0.0 210.0709017389281 210.0709017389281 17.697828084576418 0.0 0.0 0.0 0 0.2396518287104437 1.0 0.8494850021680094 0.75 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SMYEQA 3.4262 - 1312 + 1 1.496 61142.8 1.0 3991 5249 9228 HBL1_DMSO_200M_050219_1,9242 HBL1_DMSO_200M_050219_1,9242,QMYEHFQEA False True QMYEHFQEA 48.374464 591.747058093548 1548851.125 9228.0 chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;;nc|ENSG00000079263|Q13342-5|SP140;;nc|ENSG00000079263|Q13342-2|SP140;;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-6|SP140;;nc|ENSG00000079263|Q13342-4|SP140;;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;;ENSG00000079263|ENST00000392045|SP140;;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-3|SP140 6.737834294637044 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9243 48.383 494.0 230890.0 25 0 32576.0 + 39184 TYQEKITHL 9 132 566.8035247363488 1131.5924965394977 2 566.8039428591728 MULTI CID FTMS 0 0 0 9228 328199.5 0.9767309928978946 -1 0.0966644287109375 15 Unmodified _TYQEKITHL_ ENSG00000112877|ENST00000264935|CEP72;nc|ENSG00000112877|Q9P209-2|CEP72 78.06048673739656 0.0179866705178931 3 TYQEK{I|L}T{I|L}H 9 2 + 106.02 0.0 0.0 9.3694 9.3694 84.207 0.0 0.0 0.0 36.47817481888637 0.9017663034908736 0.9017663034908736 0.9017663034908736 0 1.7516453515461583 2.0 0.7302046884880937 0.5 TYQEK{I|L}T{I|L}H;TYQEK{I|L}TH{I|L};TY[AG]EK{I|L}T{I|L}H;TY[AG]EK{I|L}TH{I|L};TYQ{I|L}[SG]{I|L}T{I|L}H;TYQ{I|L}[SG]{I|L}TH{I|L};TY{I|L}Q[SG]{I|L}T{I|L}H;TY{I|L}Q[SG]{I|L}TH{I|L};TY[AG]{I|L}[SG]{I|L}T{I|L}H;TY[AG]{I|L}[SG]{I|L}TH{I|L} 9.3694;9.2897;8.5557;8.476;8.1014;8.0217;6.9769;6.8972;6.8497;6.77 -;+;-;-;-;-;-;-;-;- + 2415 + 1 1.496 88792.7 1.0 3992 5249 9228 HBL1_DMSO_200M_050219_1,9243 HBL1_DMSO_200M_050219_1,9243,TYQEKITHL True True TYQEKITHL 48.383195 566.803942859173 3906366.375 9228.0 nc|ENSG00000112877|Q9P209-2|CEP72;;ENSG00000112877|ENST00000264935|CEP72 6.776003519694011 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9244 48.387 193.0 487420.0 25 0 47431.0 + 1611 ALLQQVHSA 9 138 483.77183476394777 0 483.7720214724541 PEAK CID FTMS 0 0 0 9228 309221.78125 1.0 0 0.0 16 Unmodified _ALLQQVHSA_ ENSG00000120685|ENST00000352251|PROSER1;ENST00000484434.3_1_13:39585504-39597381:-|nuORF;nc|ENSG00000120685|Q86XN7-2|PROSER1 41.8396318013385 0.053988301646488 3 {I|L}VQRDA 6 6 23.621 0.0 0.0 2.4464 0.0 0.0 198.0623330027018 82.06694971256093 280.1292827152627 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VQRDA 2.4464 - 466 + 1 1.496 78472.6 1.0 3993 5249 9228 HBL1_DMSO_200M_050219_1,9244 HBL1_DMSO_200M_050219_1,9244,ALLQQVHSA True True ALLQQVHSA 48.386891 483.772021472454 1574402.875 9228.0 ENST00000484434.3_1_13:39585504-39597381:-|nuORF;;nc|ENSG00000120685|Q86XN7-2|PROSER1;;ENSG00000120685|ENST00000352251|PROSER1 4.805857181549072 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9245 48.396 524.0 561070.0 25 0 62329.0 + -1 YQSKYEEL 8 238 529.2509948943479 1056.4874368554956 2 530.2535888552666 MULTI CID FTMS 0 0 0 9228 307716.46875 0.6953038854267405 -1 0.0966644287109375 17 Oxidation (M) _FSVSRM(Oxidation (M))DSL_ P04264;ENSG00000167768|ENST00000252244|KRT1 24.020572477871973 0.2255576514309169 3 E{I|L}{M(Oxidation (M))|F}PTC(Carbamidomethyl (C)){I|L} 7 -1 25.284 0.0 0.0 2.3932 0.0 0.0 178.08232540948546 0.0 178.08232540948546 0.0 5.698237196322339 0.0 0.0 0 0.535666875892183 0.0 1.024227503252014 0.0 E{I|L}{M(Oxidation (M))|F}PTC(Carbamidomethyl (C)){I|L} 2.3932 - 11203 + 1 1.496 220928.4 1.0 3994 5249 9228 HBL1_DMSO_200M_050219_1,9245 HBL1_DMSO_200M_050219_1,9245,FSVSRMDSL False False YQSKYEEL 48.396126 530.253588855267 3754215.0 9228.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 5.363207499186198 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9246 48.408 699.0 437530.0 25 0 57650.0 + -1 NDVLLVLGCLS 11 220 401.5517172917056 1201.6333224753168 3 401.5509826540947 MULTI CID FTMS 0 0 0 9228 256999.625 0.084275663145092 -6 0.519500732421875 18 Carbamidomethyl (C) _NDVLLVLGC(Carbamidomethyl (C))LS_ REV__ENSG00000047621|ENST00000261250|C12orf4 4.406150317652783 0.8543594311449257 3 {I|L}{I|L} 2 -1 19.421 0.0 0.0 1.6162 0.0 0.0 0.0 972.4437286151468 972.4437286151468 8.001383521687703 0.0 0.0 0.0 0 0.1462566630072955 0.0 0.0 0.0 {I|L}{I|L} 1.6162 + + 267 + 1 1.496 231123.4 1.0 3995 5249 9228 HBL1_DMSO_200M_050219_1,9246 HBL1_DMSO_200M_050219_1,9246,NDVLLVLGCLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9247 48.419 547.0 205200.0 25 0 19855.0 + 43086 VYMNRVKEI 9 144 576.3168320862482 1150.6191112392962 2 576.3190795779228 MULTI CID FTMS 0 0 0 9228 257698.890625 0.4117630037657223 2 -0.1734695434570312 19 Unmodified _VYMNRVKEI_ ENSG00000197223|ENST00000410067|C1D;ENST00000455013.2_1_10:81784495-81784867:-|nuORF 12.872603262515298 0.4882369880199512 3 VYM 3 6 46.682 0.0 0.0 4.0572 0.0 0.0 0.0 754.4265230768186 754.4265230768186 32.730012720637376 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + VYM 4.0572 + + 175 + 1 1.496 89996.9 1.0 3996 5249 9228 HBL1_DMSO_200M_050219_1,9247 HBL1_DMSO_200M_050219_1,9247,VYMNRVKEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9248 48.431 677.0 270180.0 25 0 15632.0 28750 PVYYMLNQ 8 221 514.2504792554896 0 514.2510864138603 PEAK CID FTMS 0 0 0 9228 245198.859375 1.0 0 0.0 20 Unmodified _PVYYMLNQ_ ENSG00000198722|ENST00000635942|UNC13B 26.34127834903884 0.298120260672589 3 PV[DG]{I|L} 5 5 15.245 0.0 0.0 1.4851 0.0 0.0 163.06091718380384 379.1551912897094 542.2161084735133 0.0 0.0 0.0 0.0 0 0.9258337024346172 0.0 0.3054621874040891 0.0 PV[DG]{I|L} 1.4851 - 292 + 1 1.496 143054.0 1.0 3997 5249 9228 HBL1_DMSO_200M_050219_1,9248 HBL1_DMSO_200M_050219_1,9248,PVYYMLNQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9250 48.435 1.5 28381000.0 25 0 3287000.0 8627 EVEEDEYKAFY 11 73 711.3069763201012 1420.5993997070022 2 711.3082763552666 MULTI CID FTMS 0 0 0 9249 39983100.0 1.0 0 0.0 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 8.155526934196011 0.8366696279279818 3 [AG]AHDEAQQGGA{M(Oxidation (M))|F}Y 14 9 + 80.48 0.0 0.0 5.6652 5.6652 79.588 0.0 0.0 0.0 6.749319178650339 6.749319178650339 6.749319178650339 3.0102999566398125 0 0.8935078169319297 1.5228787452803376 0.0 0.8494850021680094 [AG]AHDEAQQGGA{M(Oxidation (M))|F}Y;[AG]AHDEAQNAGA{M(Oxidation (M))|F}Y;[AG]AHDEAQQNA{M(Oxidation (M))|F}Y;[AG]AHDEAQNQA{M(Oxidation (M))|F}Y;S[Q{I|L}]AGGQQA[HD]{M(Oxidation (M))|F}Y;[AG]AHDEAQ[AG]GGA{M(Oxidation (M))|F}Y;S[Q{I|L}]AGANQA[HD]{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;S[Q{I|L}]ANQQA[HD]{M(Oxidation (M))|F}Y;[AG]AHDEAQQGQ{M(Oxidation (M))|F}Y 5.6652;5.4533;5.4077;5.1958;5.1901;5.0281;4.9782;4.9715;4.9345;4.8969 -;-;-;-;-;-;-;-;-;- 1445 1 1.496 36508.8 1.0 3998 5250 9249 HBL1_DMSO_200M_050219_1,9250 HBL1_DMSO_200M_050219_1,9250,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9251 48.436 20.0 2253600.0 25 0 208340.0 + -1 DIPKIMMQVA 10 71 602.3079046595227 1202.601256385845 2 602.3077880740166 MULTI CID FTMS 0 0 0 9249 2168791.75 0.694040288763204 1 -0.0812835693359375 2 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))DIPKIMM(Oxidation (M))QVA_ REV__ENSG00000116194|ENST00000234816|ANGPTL1 9.38312468134398 0.6832340498775793 3 {I|L}SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]} 7 -1 34.614 0.0 0.0 2.8782 0.0 0.0 411.2123585431656 0.0 411.2123585431656 0.0 23.64471023598732 0.0 0.0 0 0.5 0.0 0.805462187404089 0.0 {I|L}SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]} 2.8782 - 61 1 1.496 36198.4 1.0 3999 5250 9249 HBL1_DMSO_200M_050219_1,9251 HBL1_DMSO_200M_050219_1,9251,DIPKIMMQVA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9252 48.437 6.4 10049000.0 25 0 2268600.0 + 36301 SYISRTNQL 9 77 541.2849379311228 1080.5553229290456 2 541.2856323122978 MULTI CID FTMS 0 0 0 9249 6581151.5 1.0 0 0.0 3 Unmodified _SYISRTNQL_ ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1 36.506200033944 0.094635877243972 3 {[TV]|[{I|L}S]}Y[KP]E{I|L}[MT] 9 8 + 31.958 0.0 0.0 2.9576 2.9576 77.547 0.0 0.0 0.0 7.221121406580341 17.978780841825074 7.221121406580341 8.507112333562858 0 0.4247425010840047 1.3010299956639813 0.3494850021680094 0.7614393726401688 {[TV]|[{I|L}S]}Y[KP]E{I|L}[MT];{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[KP]E{I|L}[MT];{[{M(Oxidation (M))|F}C]|[YS]}{I|L}E[KP][MT]{I|L};{[{M(Oxidation (M))|F}C]|[YS]}{[WT]|[RM]}[RK]Q{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{[ES]|[DT]|[{I|L}C]}[RK]Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RK]{[ES]|[DT]|[{I|L}C]}[R{M(Oxidation (M))|F}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RK][WE]{[CT]|[{M(Oxidation (M))|F}G]};[HS]P{[ES]|[DT]|[{I|L}C]}[RK]Q{I|L} 2.9576;2.1703;1.5817;0.3917;0.24991;0.15844;0.15844;0.024987 -;-;-;-;-;-;-;- 128 1 1.496 53569.8 1.0 4000 5250 9249 HBL1_DMSO_200M_050219_1,9252 HBL1_DMSO_200M_050219_1,9252,SYISRTNQL True True SYISRTNQL 48.437444 541.285632312298 26839402.0 9249.0 ENSG00000153207|ENST00000648844|AHCTF1;;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;;nc|ENSG00000153207|Q8WYP5-3|AHCTF1 5.352649052937825 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9253 48.439 17.0 3271400.0 25 0 814220.0 + 35674 SVDSHFQEV 9 86 524.2406186639206 1046.466684394641 2 524.2405273318291 MULTI CID FTMS 0 0 0 9249 3177172.75 1.0 0 0.0 4 Unmodified _SVDSHFQEV_ ENSG00000114026|ENST00000344629|OGG1;ENST00000432857.2_1_3:9792686-9793638:+|nuORF;nc|ENSG00000114026|O15527-2|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-8|OGG1 43.77239144664712 0.0547478964384323 3 {M(Oxidation (M))|F}QESVV 6 7 46.631 0.0 0.0 4.456 0.0 0.0 339.1182423302899 0.0 339.1182423302899 0.0 32.91956270212445 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}QESVV 4.456 - 632 1 1.496 54220.7 1.0 4001 5250 9249 HBL1_DMSO_200M_050219_1,9253 HBL1_DMSO_200M_050219_1,9253,SVDSHFQEV True True SVDSHFQEV 48.438624 524.240527331829 30599364.0 9249.0 ENST00000432857.2_1_3:9792686-9793638:+|nuORF;;nc|ENSG00000114026|O15527-5|OGG1;;nc|ENSG00000114026|O15527-3|OGG1;;nc|ENSG00000114026|O15527-6|OGG1;;nc|ENSG00000114026|O15527-2|OGG1;;ENSG00000114026|ENST00000344629|OGG1;;nc|ENSG00000114026|O15527-4|OGG1;;nc|ENSG00000114026|O15527-7|OGG1;;nc|ENSG00000114026|O15527-8|OGG1 6.725998242696126 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9254 48.44 28.0 2097300.0 25 0 176930.0 -1 AKFVSPMMK 9 84 535.7731360441948 1069.5317191551894 2 535.7731201052666 MULTI CID FTMS 0 0 0 9249 1526322.875 1.0 0 0.0 5 2 Oxidation (M) _AKFVSPM(Oxidation (M))M(Oxidation (M))K_ ENSG00000057704|ENST00000261226|TMCC3 9.38312468134398 0.5871240394367778 3 [KA]{M(Oxidation (M))|F}{I|L}P{[ES]|[DT]|[{I|L}C]}AK 9 -1 24.543 0.0 0.0 2.2947 0.0 0.0 0.0 94.95346563717774 94.95346563717774 13.70551014862801 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.805462187404089 [KA]{M(Oxidation (M))|F}{I|L}P{[ES]|[DT]|[{I|L}C]}AK 2.2947 - 274 1 1.496 51798.6 1.0 4002 5250 9249 HBL1_DMSO_200M_050219_1,9254 HBL1_DMSO_200M_050219_1,9254,AKFVSPMMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9255 48.441 37.0 1816000.0 25 0 419880.0 34575 SPHCYEEVCGF 11 67 424.16674352183946 1269.4784011657184 3 424.1668273806572 MULTI CID FTMS 0 0 0 9249 1446804.375 1.0 0 0.0 6 Unmodified _SPHCYEEVCGF_ ENST00000498417.5_1_22:38227952-38229926:-|nuORF;nc|ENSG00000100124|Q6NXT1-2|ANKRD54 13.90604991867851 0.7458848613461305 3 YYSPS 5 10 58.768 0.0 0.0 4.6293 0.0 0.0 0.0 669.2132624894981 669.2132624894981 43.08159703347442 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.7302046884880937 0.0 YYSPS 4.6293 - 170 + 1 1.496 58852.2 1.0 4003 5250 9249 HBL1_DMSO_200M_050219_1,9255 HBL1_DMSO_200M_050219_1,9255,SPHCYEEVCGF False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 9256 48.442 51.0 857420.0 25 0 124440.0 + -1 ICFNTDEAAFY 11 76 675.7886684793353 1349.5627840254706 2 675.7889892458916 MULTI CID FTMS 0 0 0 9249 1203437.25 0.6039934909846072 1 -0.0812835693359375 7 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FNTDEAAFY_ REV__ENSG00000163746|ENST00000696113|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7-3|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7|PLSCR2 22.736283301280096 0.5583477779825423 3 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y 11 -1 + 72.866 0.0 0.0 5.3992 5.3992 84.991 0.0 0.0 0.0 1.838713669812833 35.94476979481765 1.838713669812833 9.128498242811006 0 0.8935078169319297 0.0 1.360924374808178 2.1861818737241734 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]GGQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]N[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}C]|[YS]}QQ{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}C]|[YS]}AQQ{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}Y 5.3992;4.7228;4.7228;4.7228;4.7228;2.1068;2.011 -;-;-;-;-;-;- 702 1 1.496 35699.2 1.0 4004 5250 9249 HBL1_DMSO_200M_050219_1,9256 HBL1_DMSO_200M_050219_1,9256,ICFNTDEAAFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9257 48.444 58.0 243600.0 25 0 20772.0 + 20803 LLVVYPWTQR 10 38 637.8662835459746 1273.7180141587492 2 637.8665038943291 MULTI CID FTMS 0 0 0 9249 1047190.0 1.0 0 0.0 8 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 12.240655878213236 0.6421556946785427 3 {I|L}{I|L}V 3 7 30.686 0.0 0.0 2.4092 0.0 0.0 0.0 945.4576131179866 945.4576131179866 19.71726222832956 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + {I|L}{I|L}V 2.4092 + + 11 1 1.496 20002.4 1.0 4005 5250 9249 HBL1_DMSO_200M_050219_1,9257 HBL1_DMSO_200M_050219_1,9257,LLVVYPWTQR False True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 9258 48.446 111.0 1213900.0 25 0 98099.0 + 4372 DAVCQDFIE 9 141 520.2245078391635 1038.434462745127 2 520.2247802615166 MULTI CID FTMS 0 0 0 9249 782870.9375 1.0 0 0.0 9 Unmodified _DAVCQDFIE_ REV__ENSG00000164543|ENST00000319357|STK17A 29.081581746732265 0.1611639662936252 3 {[DA]|[EG]}VHPTD 7 -1 63.933 0.0 0.0 6.1566 0.0 0.0 0.0 300.11833660670817 300.11833660670817 49.323354237895884 0.0 0.0 0.0 0 1.3494850021680094 1.6989700043360187 0.7742275032520141 0.0 {[DA]|[EG]}VHPTD 6.1566 - 349 1 1.496 103807.5 1.0 4006 5250 9249 HBL1_DMSO_200M_050219_1,9258 HBL1_DMSO_200M_050219_1,9258,DAVCQDFIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9259 48.45 205.0 761310.0 25 0 72952.0 + 22451 LPVAIKHV 8 111 438.78666926548914 875.5587855977783 2 438.7867004275322 MULTI CID FTMS 0 0 0 9249 567122.0625 1.0 0 0.0 10 Unmodified _LPVAIKHV_ ENSG00000137193|ENST00000373509|PIM1;nc|ENSG00000137193|P11309-2|PIM1 49.66892048692302 0.1408045912742846 3 {I|L}PVAK{I|L}HV 8 2 + 66.126 0.0 0.0 7.5524 7.5524 81.094 0.0 0.0 0.0 9.20941280735775 0.5115252244738144 0.5115252244738144 0.5115252244738144 0 1.4802046884880935 1.6989700043360187 0.0 0.0 {I|L}PVAK{I|L}HV;{I|L}PVAK{I|L}VH;[VP]{I|L}AKHV{I|L};[{I|L}P]VAKHV{I|L};[VP]A{I|L}KHV{I|L};[{I|L}P]G{I|L}KHV{I|L};{I|L}VPAK{I|L}HV;{I|L}VPAK{I|L}VH;V{I|L}PAK{I|L}HV;V{I|L}PAK{I|L}VH 7.5524;7.494;6.7035;6.5412;6.3336;6.1712;5.7854;5.727;5.2405;5.1821 -;-;-;-;-;-;-;-;-;- 785 + 1 1.496 120880.2 1.0 4007 5250 9249 HBL1_DMSO_200M_050219_1,9259 HBL1_DMSO_200M_050219_1,9259,LPVAIKHV False True LPVAIKHV 48.450046 438.786700427532 2465209.75 9249.0 nc|ENSG00000137193|P11309-2|PIM1;;ENSG00000137193|ENST00000373509|PIM1;;PIM1|p.S75F|1|0.2|ENSG00000137193|chr6:37171015-37171015|C/T|missense_variant 5.397939840952556 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9260 48.453 152.0 803270.0 25 0 67888.0 + 18415 KVVEIVKKL 9 126 352.5777104273992 1054.7113018823975 3 352.5775024294853 MULTI CID FTMS 0 0 0 9249 474477.40625 1.0 0 0.0 11 Unmodified _KVVEIVKKL_ ENSG00000175467|ENST00000312397|SART1 53.31671820480216 0.0330978755772958 3 {I|L}KVD{I|L}VKK{I|L} 9 3 + 62.336 0.0 0.0 5.9102 5.9102 81.35 0.0 0.0 0.0 6.681212380090216 3.5090380939021912 3.5090380939021912 3.5090380939021912 0 0.6989700043360187 0.0 0.3494850021680094 0.7059771852360797 {I|L}KVD{I|L}VKK{I|L};{I|L}KVD{I|L}VK{I|L}K 5.9102;5.5775 -;- 258 + 1 1.496 101939.3 1.0 4008 5250 9249 HBL1_DMSO_200M_050219_1,9260 HBL1_DMSO_200M_050219_1,9260,KVVEIVKKL True True KVVEIVKKL 48.453057 352.577502429485 3461770.25 9249.0 ENSG00000175467|ENST00000312397|SART1 5.161611874898274 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9261 48.457 185.0 127480.0 25 0 15309.0 -1 0 39 1038.4762568994538 2074.937960865708 2 1038.476977527142 MULTI CID FTMS 0 0 0 9249 437722.21875 1.0 0 0.0 12 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES 4 -1 18.812 0.0 0.0 0.90664 0.0 0.0 0.0 1561.7009668073672 1561.7009668073672 1.9010562085580285 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES 0.90664 - 50 1 1.496 26170.4 1.0 4009 5250 9249 HBL1_DMSO_200M_050219_1,9261 HBL1_DMSO_200M_050219_1,9261, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9262 48.465 475.0 422140.0 25 0 12710.0 + -1 RYPGYMNNDL 10 129 628.921453631588 3139.5708858249395 5 629.3228637576103 MULTI CID FTMS 0 0 0 9249 398732.53125 1.0 0 0.0 13 ENSG00000037042|ENST00000251412|TUBG2;ENSG00000131462|ENST00000251413|TUBG1 3 {M(Oxidation (M))|F}{M(Oxidation (M))|F}EEA{I|L}SA{I|L}SD[H{I|L}]A[HK] 16 -1 76.914 0.0 0.0 2.4498 0.0 0.0 1325.6817797616832 0.0 1325.6817797616832 0.0 42.04379945027516 0.0 0.0 0 0.9247425010840048 0.0 1.960409376976188 0.3807196863200844 {M(Oxidation (M))|F}{M(Oxidation (M))|F}EEA{I|L}SA{I|L}SD[H{I|L}]A[HK] 2.4498 - 5003 + 1 1.496 152283.0 1.0 4010 5250 9249 HBL1_DMSO_200M_050219_1,9262 HBL1_DMSO_200M_050219_1,9262, False False RYPGYMNNDL 48.465088 629.32286375761 482106.25 9249.0 ENSG00000037042|ENST00000251412|TUBG2;;ENSG00000131462|ENST00000251413|TUBG1 2.418966218829155 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9263 48.468 144.0 524440.0 25 0 29603.0 + 39185 TYQEKITHL 9 119 378.20463483218 1131.59207509674 3 378.2041503787041 MULTI CID FTMS 0 0 0 9249 343568.5 1.0 0 0.0 14 Unmodified _TYQEKITHL_ ENSG00000112877|ENST00000264935|CEP72;nc|ENSG00000112877|Q9P209-2|CEP72 22.736283301280096 0.2418982879461534 3 TQYEK{I|L}TH{I|L} 9 2 + 34.641 0.0 0.0 3.0612 3.0612 82.737 0.0 0.0 0.0 22.85782734041933 9.278810752981784 9.278810752981784 34.64056395798839 0 0.0440228147639203 0.0 0.0 0.0 TQYEK{I|L}TH{I|L} 3.0612 - 77 + 1 1.496 64613.6 1.0 4011 5250 9249 HBL1_DMSO_200M_050219_1,9263 HBL1_DMSO_200M_050219_1,9263,TYQEKITHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9264 48.47 107.0 622850.0 25 0 26140.0 22934 LSEMEIGMV 9 119 504.7422117554133 1007.4698705776266 2 504.7444030642509 MULTI CID FTMS 0 0 0 9249 343350.03125 1.0 0 0.0 15 Unmodified _LSEMEIGMV_ ENSG00000112658|ENST00000265354|SRF 16.942295170755138 0.3780752226737986 3 [QA]MEVTM[KA] 9 7 + 32.676 0.0 0.0 3.2434 3.2434 77.135 0.0 0.0 0.0 10.919986060656498 7.146942222687169 7.146942222687169 7.146942222687169 0 0.0 0.5228787452803376 0.0 0.2887254899964357 [QA]MEVTM[KA];[QA]MEVT[KC]V;[QA]MEV[RK]{M(Oxidation (M))|F};[QA]ME{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RV;{[TV]|[{I|L}S]}[KS]QE[WM];[QA]M{[CA]|SS}{[ET]|[MV]}RV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VT[{I|L}V][WM];{[TV]|[{I|L}S]}C(Carbamidomethyl (C))RR[WM];{[TV]|[{I|L}S]}EM[{I|L}V][WM];[QA]M{[{M(Oxidation (M))|F}D]|MM}AARV 3.2434;2.534;2.1898;1.5257;0.91056;0.9052;0.84023;0.77574;0.64008;0.30761 -;-;-;-;-;-;-;-;-;- 339 + 1 1.496 54812.1 1.0 4012 5250 9249 HBL1_DMSO_200M_050219_1,9264 HBL1_DMSO_200M_050219_1,9264,LSEMEIGMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9265 48.474 220.0 573790.0 25 0 44464.0 + 13173 HFVPGTTAV 9 150 464.74795308162254 927.4813532300452 2 464.7481262087822 MULTI CID FTMS 0 0 0 9249 287984.625 0.5055243108956179 -3 0.2610397338867187 16 Unmodified _HFVPGTTAV_ ENSG00000205220|ENST00000358514|PSMB10;ENST00000574576.2_1_16:67968465-67968768:-|nuORF 34.18733598223924 0.1073653526364521 3 TR[{M(Oxidation (M))|F}E]AV 6 7 35.138 0.0 0.0 3.7885 0.0 0.0 206.1266235047813 0.0 206.1266235047813 0.0 11.670175336041453 0.0 0.0 0 0.3494850021680094 0.0 0.7742275032520141 0.0 TR[{M(Oxidation (M))|F}E]AV 3.7885 - 622 + 1 1.496 99804.9 1.0 4013 5250 9249 HBL1_DMSO_200M_050219_1,9265 HBL1_DMSO_200M_050219_1,9265,HFVPGTTAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9266 48.485 603.0 324150.0 25 0 19222.0 + 39098 TWHFSFQV 8 205 526.2526444467808 1050.4907359603617 2 526.7563964724541 MULTI CID FTMS 0 0 0 9249 273956.9375 0.2084243986172595 12 -1.2864494323730469 17 Unmodified _TWHFSFQV_ REV__ENST00000378509.8_1_7:133978052-133978163:-|nuORF 19.438996006549623 0.6237395211498085 3 DC(Carbamidomethyl (C))ESAKQV 8 -1 39.396 0.0 0.0 3.7503 0.0 0.0 115.10091093459546 0.0 115.10091093459546 0.0 1.5197762735269364 0.0 0.0 0 0.0402877273156861 0.0 0.7302046884880937 0.5138793319624578 DC(Carbamidomethyl (C))ESAKQV 3.7503 - 3157 + 1 1.496 151457.4 1.0 4014 5250 9249 HBL1_DMSO_200M_050219_1,9266 HBL1_DMSO_200M_050219_1,9266,TWHFSFQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9267 48.496 628.0 275960.0 25 0 12134.0 + -1 YYCCEEGLFMC 11 160 737.7640304458522 1473.5135079585043 2 737.7635986208916 MULTI CID FTMS 0 0 0 9249 249923.5625 0.854748828448927 -1 0.0921859741210937 18 2 Carbamidomethyl (C) _YYC(Carbamidomethyl (C))C(Carbamidomethyl (C))EEGLFMC_ REV__nc|ENSG859|P60507|ERVFC1 5.731851221503515 0.8481046878870278 3 [TP]EANQQAED 10 -1 57.233 0.0 0.0 3.8842 0.0 0.0 0.0 387.0513094537719 387.0513094537719 26.42687913490909 0.0 0.0 0.0 0 0.5 0.0 1.0629529932484498 0.0 [TP]EANQQAED 3.8842 - 4093 + 1 1.496 121187.5 1.0 4015 5250 9249 HBL1_DMSO_200M_050219_1,9267 HBL1_DMSO_200M_050219_1,9267,YYCCEEGLFMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9268 48.501 213.0 943890.0 25 0 36284.0 + 45189 YQSNFLNCYEY 11 159 722.2969262082635 1442.5792994833268 2 722.2963134646416 MULTI CID FTMS 0 0 0 9249 243650.84375 0.2484248710771529 -1 0.0921859741210937 19 Unmodified _YQSNFLNCYEY_ REV__ENST00000558841.1_1_15:52338413-52338458:+|nuORF 20.41453444215458 0.6105011870913812 3 [QA]HDEANC{M(Oxidation (M))|F}V{M(Oxidation (M))|F}Y 12 -1 + 99.482 0.0 0.0 6.8961 6.8961 91.293 0.0 0.0 0.0 57.37400477731518 15.10666445614629 15.10666445614629 9.434341081910349 0 2.7034021960761265 0.638272163982407 0.3054621874040891 0.9749073637206092 [QA]HDEANC{M(Oxidation (M))|F}V{M(Oxidation (M))|F}Y;[QA]HDEAQY[DG]{M(Oxidation (M))|F}Y;[QA]HDE[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}Y;[QA]HDEANP[HD]{M(Oxidation (M))|F}Y;[QA]HDEAGGC{M(Oxidation (M))|F}V{M(Oxidation (M))|F}Y;[QA]HD[DP]QA[HD]{M(Oxidation (M))|F}Y;[QA]HDEPN[HD]A{M(Oxidation (M))|F}Y;[QA]HDEPNA[HD]{M(Oxidation (M))|F}Y;[QA]HDEA[AG]Y[DG]{M(Oxidation (M))|F}Y;Y[C(Carbamidomethyl (C))K]EANC{M(Oxidation (M))|F}V{M(Oxidation (M))|F}Y 6.8961;6.2422;5.9913;5.9279;5.5896;5.4296;5.3489;5.2661;4.9357;4.9003 -;-;-;-;-;-;-;-;-;- 21362 + 1 1.496 142342.5 1.0 4016 5250 9249 HBL1_DMSO_200M_050219_1,9268 HBL1_DMSO_200M_050219_1,9268,YQSNFLNCYEY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9269 48.512 618.0 81275.0 25 0 6889.4 23203 LSSLDTAEDPW 11 92 617.2851402537968 1232.5557275743936 2 617.2847778201103 MULTI CID FTMS 0 0 0 9249 234018.421875 1.0 0 0.0 20 Unmodified _LSSLDTAEDPW_ ENST00000257527.8_2_5:156907758-156907929:-|nuORF 4.897010918128616 0.8520435188433833 3 [YV]V 3 11 18.161 0.0 0.0 1.4734 0.0 0.0 0.0 868.3331988480842 868.3331988480842 6.566818653688532 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [YV]V 1.4734 - 114 1 1.496 43239.1 1.0 4017 5250 9249 HBL1_DMSO_200M_050219_1,9269 HBL1_DMSO_200M_050219_1,9269,LSSLDTAEDPW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9271 48.516 14.0 2318000.0 25 0 246970.0 + 24965 MPPPPPQGV 9 66 460.2385793050109 918.462605676822 2 460.2387878298759 MULTI CID FTMS 0 0 0 9270 2522225.25 0.0837853724070045 28 -2.6493911743164062 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 63.562846038646086 0.0241094678104353 3 {[HG]|PP}MPPPQGV 9 2 {[HG]|PP}M + + 33.509 5.6864 1.7489 3.6484 3.6484 51.586 0.0 0.0 0.0 0.0 9.691833012836923 0.0 0.0 0 1.5 0.0 0.0 0.3807196863200844 {[HG]|PP}MPPPQGV 3.6484 - 195 + 1 1.496 32953.9 1.0 4018 5251 9270 HBL1_DMSO_200M_050219_1,9271 HBL1_DMSO_200M_050219_1,9271,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9272 48.518 37.0 677290.0 25 0 75264.0 + 31220 RLQPSSLTSV 10 49 544.3086103981557 1086.6026678631113 2 544.3087646365166 MULTI CID FTMS 0 0 0 9270 1124223.75 0.2449141413470254 2 -0.2358016967773437 2 Unmodified _RLQPSSLTSV_ nc|ENSG00000172113|O75414-3|NME6 16.149105407346934 0.5765757077271437 3 {I|L}TW 3 8 35.445 0.0 0.0 3.262 0.0 0.0 668.360643455275 0.0 668.360643455275 0.0 16.059837384595923 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 {I|L}TW 3.262 - 35 1 1.496 28409.7 1.0 4019 5251 9270 HBL1_DMSO_200M_050219_1,9272 HBL1_DMSO_200M_050219_1,9272,RLQPSSLTSV False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 9273 48.519 54.0 881670.0 25 0 96911.0 + 31571 RQPDSGISSI 10 71 530.2751792756749 1058.5358056181497 2 530.2751953005791 MULTI CID FTMS 0 0 0 9270 789791.375 0.1990051210110114 -2 0.1734695434570312 3 Unmodified _RQPDSGISSI_ ENSG00000163902|ENST00000296255|RPN1 49.52724829834842 0.0829255630816734 3 {[TV]|[{I|L}S]}[YG]YG{I|L}SS{I|L} 10 5 + 75.2 0.0 0.0 7.1041 7.1041 92.02 0.0 0.0 0.0 9.493559221610964 55.13805019828801 9.493559221610964 10.00508444608478 0 1.305462187404089 1.2218487496163564 1.2302046884880935 0.0 {[TV]|[{I|L}S]}[YG]YG{I|L}SS{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[DP]SG{I|L}SS{I|L};{[TV]|[{I|L}S]}S{[QN]|[E{I|L}]|[KN]}[HS]SS{I|L};{[QN]|[E{I|L}]|[KN]}G{[{M(Oxidation (M))|F}H]|[RQ]}G{I|L}SS{I|L};{[TV]|[{I|L}S]}[YG]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};{[CA]|SS}{I|L}{[QN]|[E{I|L}]|[KN]}[HS]SS{I|L};{[WT]|[RM]}{[QN]|[E{I|L}]|[KN]}[HS]SS{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[DP]S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};{[CA]|SS}{I|L}{[QN]|[E{I|L}]|[KN]}[VP]DS{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[DP][KT]DS{I|L} 7.1041;6.1589;4.9947;4.9034;4.5988;4.1416;3.9584;3.6536;3.456;3.3692 -;+;-;-;-;-;-;-;-;- + 357 1 1.496 42331.7 1.0 4020 5251 9270 HBL1_DMSO_200M_050219_1,9273 HBL1_DMSO_200M_050219_1,9273,RQPDSGISSI True True RQPDSGISSI 48.518954 530.275195300579 44893176.0 9270.0 ENSG00000163902|ENST00000296255|RPN1 8.874130566914877 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9274 48.52 41.0 1161500.0 25 0 150220.0 27591 PLDLVKCRMQ 10 59 601.8244267583193 1201.6343005834383 2 601.8241454958916 MULTI CID FTMS 0 0 0 9270 768575.125 0.1402993103187677 -4 0.3423233032226562 4 Unmodified _PLDLVKCRMQ_ ENSG00000075415|ENST00000552981|SLC25A3;ENST00000546766.5_1_12:98989167-98989365:+|nuORF;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENST00000547908.1_1_12:98989476-98991822:+|nuORF;nc|ENSG00000075415|Q00325|SLC25A3 1.9063754702782607 0.7178183895776981 3 {I|L}P 2 9 10.969 0.0 0.0 0.91285 0.0 0.0 97.97750505537108 890.4977331830005 988.4752382383716 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}P 0.91285 - 6 + 1 1.496 40010.7 1.0 4021 5251 9270 HBL1_DMSO_200M_050219_1,9274 HBL1_DMSO_200M_050219_1,9274,PLDLVKCRMQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9275 48.522 82.0 590240.0 25 0 85601.0 + 3168 AVTSVAKVV 9 79 437.2737498352554 872.5329467373109 2 437.2736999392509 MULTI CID FTMS 0 0 0 9270 657347.625 0.1051675851964909 -2 0.1734695434570312 5 Unmodified _AVTSVAKVV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 54.773552608820026 0.0299037012502309 3 {[VA]|[{I|L}G]}TSVAKVV 9 0 + 50.339 0.0 0.0 5.7693 5.7693 89.661 0.0 0.0 0.0 27.424639645692835 10.94212497064703 10.94212497064703 18.104028237526748 0 1.1677353201839438 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}TSVAKVV;{[VA]|[{I|L}G]}K{[WT]|[RM]}[R{I|L}];{[WT]|[RM]}AKV[R{I|L}];[KA]V{[WT]|[RM]}[R{I|L}] 5.7693;3.6945;3.522;0.82924 +;-;-;- + 271 + 1 1.496 44647.9 1.0 4022 5251 9270 HBL1_DMSO_200M_050219_1,9275 HBL1_DMSO_200M_050219_1,9275,AVTSVAKVV True True AVTSVAKVV 48.521981 437.273699939251 59431052.0 9270.0 nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27 5.173057238260905 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9276 48.524 87.0 507190.0 25 0 53571.0 + 18535 KYTEGVQSL 9 68 512.7688152828367 1023.5230776324736 2 512.7694579958916 MULTI CID FTMS 0 0 0 9270 584178.0625 0.4973528714703844 -1 0.0812835693359375 6 Unmodified _KYTEGVQSL_ ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16552211-16552709:-|nuORF 32.78568957990786 0.1150597335874693 3 {[TV]|[{I|L}S]}EG[YK]QS{I|L} 9 4 + 49.159 0.0 0.0 4.803 4.803 83.677 0.0 0.0 0.0 13.406454383519716 11.0827208845118 11.0827208845118 9.208187539523747 0 1.3182503180159344 1.3010299956639813 0.7614393726401688 0.0 {[TV]|[{I|L}S]}EG[YK]QS{I|L};{[TV]|[{I|L}S]}EG[YK][AG]S{I|L};[YK]{[ET]|[MV]}GVQS{I|L};[YK]{[ET]|[MV]}GV[AG]S{I|L};[YK][KC][WP]S{I|L} 4.803;3.9033;3.4931;2.5935;0.37416 -;-;+;-;- + 213 1 1.496 40136.0 1.0 4023 5251 9270 HBL1_DMSO_200M_050219_1,9276 HBL1_DMSO_200M_050219_1,9276,KYTEGVQSL True True KYTEGVQSL 48.523921 512.769457995892 17864906.0 9270.0 ENST00000537175.1_1_12:16552211-16552709:-|nuORF;;ENSG00000092201|ENST00000216297|SUPT16H 6.278249263763428 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9277 48.529 280.0 478210.0 25 0 50515.0 + 30658 RFPDTVKQM 9 132 561.2921924375169 1120.5698319418336 2 561.2922241091728 MULTI CID FTMS 0 0 0 9270 350545.6875 0.2925051059165424 -2 0.1734695434570312 7 Unmodified _RFPDTVKQM_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 57.72198328787511 0.0273433238377839 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[KQ]TVKQM 9 3 + 63.584 0.0 0.0 5.6743 5.6743 79.614 0.0 0.0 0.0 3.0102999566398125 8.283799610788222 3.0102999566398125 3.0102999566398125 0 1.1549471895720984 0.0 0.7742275032520141 0.5418727718234408 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[KQ]TVKQM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RV]TVKQM;[YN]K[NP]VKQM;[R{M(Oxidation (M))|F}][DP]TVKQM;[YN]KV[NP]KQM;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[KQ]TVK[AG]M;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RV]TVK[AG]M;{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}TVKQM;[YN]K[NP]VK[AG]M;{NN|[MP]|[D{I|L}]|[EV]}S{[TV]|[{I|L}S]}TVKQM 5.6743;5.4057;5.2544;4.9543;4.935;4.8526;4.5839;4.5085;4.4326;4.3373 -;-;-;+;-;-;-;-;-;- + 357 1 1.496 103237.3 1.0 4024 5251 9270 HBL1_DMSO_200M_050219_1,9277 HBL1_DMSO_200M_050219_1,9277,RFPDTVKQM True True RFPDTVKQM 48.529088 561.292224109173 14759699.0 9270.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 6.399466514587402 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9278 48.533 178.0 1486600.0 25 0 202010.0 + 10775 FYPERVRAV 9 134 379.5452432429359 1135.6139003290075 3 379.5450317263603 MULTI CID FTMS 0 0 0 9270 350069.4375 1.0 0 0.0 8 Unmodified _FYPERVRAV_ ENSG00000120915|ENST00000521400|EPHX2;ENST00000520623.5_1_8:27348689-27396319:+|nuORF;nc|ENSG00000120915|P34913-2|EPHX2;nc|ENSG00000120915|P34913-3|EPHX2 43.85829265575387 0.0542763391141878 3 {M(Oxidation (M))|F}YVAP{I|L}{[CP]|[EA]}VK 10 6 + 65.125 0.0 0.0 5.7348 5.7348 78.789 0.0 0.0 0.0 9.128498242810991 2.373609157946028 2.373609157946028 2.373609157946028 0 0.3054621874040891 0.0 0.3807196863200844 1.2302046884880935 {M(Oxidation (M))|F}YVAP{I|L}{[CP]|[EA]}VK;{M(Oxidation (M))|F}YVAP{I|L}{[CP]|[EA]}KV;{M(Oxidation (M))|F}YVA[DP]RR{I|L};{M(Oxidation (M))|F}YPER[RV]AV;{M(Oxidation (M))|F}YPER[RV]G{I|L};{M(Oxidation (M))|F}YVA[W{I|L}][QP]{I|L};{M(Oxidation (M))|F}YPE[VG]RR{I|L};{M(Oxidation (M))|F}YV[WP][RV]AV;{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}{I|L}[SG]VYE;{M(Oxidation (M))|F}YV[WP][RV]G{I|L} 5.7348;5.5258;3.6549;3.4933;3.3186;2.8228;2.8131;1.9285;1.8832;1.7539 -;-;-;+;-;-;-;-;-;- + 731 + 1 1.496 213018.8 1.0 4025 5251 9270 HBL1_DMSO_200M_050219_1,9278 HBL1_DMSO_200M_050219_1,9278,FYPERVRAV True True FYPERVRAV 48.532544 379.54503172636 3454783.25 9270.0 nc|ENSG00000120915|P34913-2|EPHX2;;ENSG00000120915|ENST00000521400|EPHX2;;nc|ENSG00000120915|P34913-3|EPHX2;;ENST00000520623.5_1_8:27348689-27396319:+|nuORF 5.13021183013916 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9279 48.537 243.0 631070.0 25 0 66749.0 6857 EEEEEEEGRFY 11 149 482.5265439225683 1444.557802367905 3 482.5267516970634 MULTI CID FTMS 0 0 0 9270 343567.5 1.0 0 0.0 9 Unmodified _EEEEEEEGRFY_ ENSG00000182255|ENST00000328224|KCNA4 2.6312355333042263 0.8627335947654684 3 {[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}EAQQNA{M(Oxidation (M))|F}Y 12 7 + 67.105 0.0 0.0 4.6453 4.6453 78.633 0.0 0.0 0.0 5.799530816977807 51.62008419542517 5.799530816977807 4.771212547196626 0 0.8182503180159344 0.8239087409443188 0.5866968715561641 0.8494850021680094 {[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}EAQQNA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}EAQNQA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}EAQQGGA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}EA[AG]NQA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}EAQGGQA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}EAQN[AG]A{M(Oxidation (M))|F}Y;[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{M(Oxidation (M))|F}AQQNA{M(Oxidation (M))|F}Y;[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{M(Oxidation (M))|F}AQNQA{M(Oxidation (M))|F}Y 4.6453;4.3151;4.0155;4.0155;4.0155;3.6852;3.6852;3.6852;3.6153;3.285 -;-;-;-;-;-;-;-;-;- 988 1 1.496 119454.0 1.0 4026 5251 9270 HBL1_DMSO_200M_050219_1,9279 HBL1_DMSO_200M_050219_1,9279,EEEEEEEGRFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9280 48.541 222.0 702940.0 25 0 55710.0 -1 EQMECLSV 8 155 506.2093250973804 1010.4040972615608 2 506.2097045779228 MULTI CID FTMS 0 0 0 9270 332861.53125 1.0 0 0.0 10 Carbamidomethyl (C),Oxidation (M) _EQM(Oxidation (M))EC(Carbamidomethyl (C))LSV_ ENST00000485738.5_1_20:13765717-13782219:+|nuORF 12.531546534597751 0.7257836412119636 3 {[DA]|[EG]}[HC]DV{I|L} 7 -1 40.986 0.0 0.0 4.0564 0.0 0.0 0.0 254.07515374032965 254.07515374032965 14.681139345338693 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.5189301784845296 0.0 {[DA]|[EG]}[HC]DV{I|L} 4.0564 - 373 1 1.496 117352.5 1.0 4027 5251 9270 HBL1_DMSO_200M_050219_1,9280 HBL1_DMSO_200M_050219_1,9280,EQMECLSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9281 48.555 770.0 520770.0 25 0 32131.0 + 41636 VPPPSAQEI 9 265 469.25301885211206 936.491484771024 2 469.2522765994072 MULTI CID FTMS 0 0 0 9270 245541.34375 0.0211472618519487 10 -1.1320228576660156 11 Unmodified _VPPPSAQEI_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 61.357469665136826 0.0253304979873734 3 [VP]P[PS]AQE{I|L} 9 0 + 58.571 0.0 0.0 6.2543 6.2543 79.069 0.0 0.0 0.0 12.623063443600463 16.478174818886373 12.623063443600463 1.5229490321510113 0 0.7742275032520141 1.5228787452803376 0.903598431600422 0.3252574989159953 + + [VP]P[PS]AQE{I|L};[VP]P{[SA]|[TG]}PQE{I|L};[VP]P[PS]A[AG]E{I|L};[PS]PAPVQE{I|L};[PS]PPVAQE{I|L};[PS]PPAVQE{I|L};[VP]P{[SA]|[TG]}P[AG]E{I|L};[PS]PAVPQE{I|L};[VP]P[DN]SPV{I|L};[VP]YYSPV{I|L} 6.2543;6.0916;4.9237;4.9063;4.7992;4.7926;4.7611;4.7503;4.7458;4.1169 +;-;-;-;-;-;-;-;-;- + 2177 1 1.496 298961.6 1.0 4028 5251 9270 HBL1_DMSO_200M_050219_1,9281 HBL1_DMSO_200M_050219_1,9281,VPPPSAQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9282 48.568 800.0 230070.0 25 0 15453.0 25415 NEAYSLYEHFY 11 138 718.3120422738842 1434.6095316145684 2 718.3150512576103 MULTI CID FTMS 0 0 0 9270 174522.734375 0.3339807254116296 -4 0.3423233032226562 12 Unmodified _NEAYSLYEHFY_ ENSG00000091879|ENST00000629816|ANGPT2;nc|ENSG00000091879|O15123-2|ANGPT2;nc|ENSG00000091879|O15123|ANGPT2 24.020572477871973 0.5281922720044371 3 {[NV]|[RG]}DANQQAEH{M(Oxidation (M))|F}Y 12 6 {[NV]|[RG]}D + + 89.836 4.6658 1.4219 6.262 6.262 59.859 0.0 0.0 0.0 0.0 28.718757127620464 0.0 0.0 0 0.2887254899964357 0.0 1.4291746928241125 1.2302046884880935 {[NV]|[RG]}DANQQAEH{M(Oxidation (M))|F}Y 6.262 - 28417 + 1 1.496 133906.8 0.959999978542328 4029 5251 9270 HBL1_DMSO_200M_050219_1,9282 HBL1_DMSO_200M_050219_1,9282,NEAYSLYEHFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9283 48.582 800.0 99650.0 25 0 19092.0 + 1065 AGHGDGGY 8 79 733.2891843349105 732.2819078683104 1 733.2892333865166 MULTI CID FTMS 0 0 0 9270 128554.28125 1.0 0 0.0 13 Unmodified _AGHGDGGY_ REV__ENST00000268989.7_1_17:2267943-2270571:+|nuORF 2.889219685676258 0.8067950007271085 3 [YT][MT]{M(Oxidation (M))|F}A 6 -1 + 26.176 0.0 0.0 3.5745 3.5745 83.242 0.0 0.0 0.0 12.1075006521491 11.227044356870692 11.227044356870692 22.25009480581832 0 0.0 1.154901959985743 0.2742275032520141 0.0 [YT][MT]{M(Oxidation (M))|F}A;[DV][CS]{M(Oxidation (M))|F}Y;DD[MN][PA]A 3.5745;0.53606;0.059435 -;-;- 78 1 1.496 61017.4 0.8600000143051147 4030 5251 9270 HBL1_DMSO_200M_050219_1,9283 HBL1_DMSO_200M_050219_1,9283,AGHGDGGY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9284 48.596 800.0 285020.0 25 0 64983.0 + 10776 FYPERVRAV 9 156 568.8142244807324 1135.613896028265 2 568.8137695193291 MULTI CID FTMS 0 0 0 9270 119544.296875 1.0 0 0.0 14 Unmodified _FYPERVRAV_ ENSG00000120915|ENST00000521400|EPHX2;ENST00000520623.5_1_8:27348689-27396319:+|nuORF;nc|ENSG00000120915|P34913-2|EPHX2;nc|ENSG00000120915|P34913-3|EPHX2 20.453626601364224 0.2830276176381075 3 VA 2 7 27.258 0.0 0.0 2.4002 0.0 0.0 0.0 962.4886852967078 962.4886852967078 1.5834180980732562 0.0 0.0 0.0 0 0.1595680409956017 0.619788758288394 0.0 0.0 VA 2.4002 - 772 + 1 1.496 173137.5 0.8799999952316284 4031 5251 9270 HBL1_DMSO_200M_050219_1,9284 HBL1_DMSO_200M_050219_1,9284,FYPERVRAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9285 48.611 800.0 82163.0 25 0 2992.8 + -1 INAQRVCNMWL 11 108 682.3331786990166 0 682.3331786990166 PEAK CID FTMS 0 0 0 -1 0 15 Oxidation (M) _INAQRVCNM(Oxidation (M))WL_ REV__ENSG00000156284|ENST00000399899|CLDN8 12.240655878213236 0.4295705806160874 3 {I|L}{M(Oxidation (M))|F}GD 4 -1 14.553 0.0 0.0 1.068 0.0 0.0 233.097503264118 694.3195894830686 927.4170927471866 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}GD 1.068 - 149 + 1 1.496 52318.7 0.8700000047683716 4032 5251 9270 HBL1_DMSO_200M_050219_1,9285 HBL1_DMSO_200M_050219_1,9285,INAQRVCNMWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9286 48.625 800.0 129600.0 25 0 11264.0 + -1 PWWCRPWARSR 11 98 779.3829948774453 0 779.7673217654228 PEAK CID FTMS 0 0 0 -1 0 16 Carbamidomethyl (C) _PWWC(Carbamidomethyl (C))RPWARSR_ REV__ENST00000534167.5_1_8:145168880-145169283:+|nuORF 1.1933415558491238 0.4761840153648598 3 QAEDQ 5 -1 37.652 0.0 0.0 2.4186 0.0 0.0 777.4318089914156 205.0731142633422 982.5049232547576 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.9163865622122672 QAEDQ 2.4186 - 702 + 1 1.496 77578.2 0.7699999809265137 4033 5251 9270 HBL1_DMSO_200M_050219_1,9286 HBL1_DMSO_200M_050219_1,9286,PWWCRPWARSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9287 48.628 76.0 768010.0 25 0 61679.0 2945 AVHEGLGLAVQ 11 93 547.3035801130432 1092.5926072928862 2 547.3031494021416 MULTI CID FTMS 0 0 0 9270 116467.5859375 0.1911294901648099 -2 0.1734695434570312 17 Unmodified _AVHEGLGLAVQ_ ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B 26.268140514670165 0.4754186812857754 3 S{I|L}VAG[Q{I|L}] 7 8 49.341 0.0 0.0 4.5159 0.0 0.0 406.1962147443375 0.0 406.1962147443375 0.0 23.83925646871916 0.0 0.0 0 0.2742275032520141 0.0 1.1861818737241734 0.0 S{I|L}VAG[Q{I|L}] 4.5159 - 348 1 1.496 50850.8 1.0 4034 5251 9270 HBL1_DMSO_200M_050219_1,9287 HBL1_DMSO_200M_050219_1,9287,AVHEGLGLAVQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9288 48.642 800.0 239480.0 25 0 36712.0 -1 0 171 579.2773494191844 578.2700729525843 1 579.2790405154228 MULTI CID FTMS 0 0 0 9270 110918.09375 0.0255289238218275 10 -1.1320228576660156 18 3 [DG]{M(Oxidation (M))|F}{I|L}Q 5 -1 [DG]{M(Oxidation (M))|F} + + 33.148 -2.5527 -0.79994 5.7323 5.7323 58.176 0.0 0.0 0.0 0.0 18.209230142951096 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.5941876774005248 [DG]{M(Oxidation (M))|F}{I|L}Q 5.7323 - 115 + 1 1.496 143835.1 0.8899999856948853 4035 5251 9270 HBL1_DMSO_200M_050219_1,9288 HBL1_DMSO_200M_050219_1,9288, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9289 48.656 800.0 286580.0 25 0 22133.0 + -1 GEYEMITV 8 216 479.214228776049 0 479.2133666872978 PEAK CID FTMS 0 0 0 9270 95557.0703125 0.3963208821064368 5 -0.5703353881835938 19 Oxidation (M) _GEYEM(Oxidation (M))ITV_ REV__ENSG00000188452|ENST00000410087|CERKL;REV__nc|ENSG00000188452|Q49MI3-5|CERKL;REV__nc|ENSG00000188452|Q49MI3|CERKL 19.438996006549623 0.4285751805470146 3 THKMVPG 7 -1 20.227 0.0 0.0 2.1149 0.0 0.0 134.9694598940918 68.05133997134999 203.0207998654418 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 THKMVPG 2.1149 - 382 + 1 1.496 172782.2 0.7200000286102295 4036 5251 9270 HBL1_DMSO_200M_050219_1,9289 HBL1_DMSO_200M_050219_1,9289,GEYEMITV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9291 48.661 36.0 936290.0 25 0 92297.0 + 18240 KVIDPATATSV 11 65 551.3115120015167 1100.6084710698333 2 551.3109619021416 MULTI CID FTMS 0 0 0 9290 1599198.5 0.4718451961558388 -1 0.1439704895019531 1 Unmodified _KVIDPATATSV_ ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4 35.61225514009592 0.279986979807413 3 [TA]PAV[{I|L}A]TATSV 12 6 + 49.017 0.0 0.0 4.4536 4.4536 76.958 0.0 0.0 0.0 3.951209470171996 8.68440000316717 3.951209470171996 3.951209470171996 0 1.1549471895720984 0.0 1.4436726795685342 0.0 [TA]PAV[{I|L}A]TATSV;[VS][R{I|L}][PA]TATSV;[TP]AAV[{I|L}A]TATSV;[VS][PG]V[{I|L}A]TATSV;[VS][RP][{I|L}A]TATSV;[PG][VS]V[{I|L}A]TATSV;[PG]T[{I|L}A][{I|L}A]TATSV;[TP]G[{I|L}A][{I|L}A]TATSV;[TP][Q{I|L}][{I|L}A]TATSV 4.4536;4.0946;4.0529;3.9772;3.6611;2.6543;2.5055;2.4739;2.3067 -;-;-;-;-;-;-;-;- 283 1 1.504 35509.5 1.0 4037 5252 9290 HBL1_DMSO_200M_050219_1,9291 HBL1_DMSO_200M_050219_1,9291,KVIDPATATSV False True KVIDPATATSV 48.660526 551.310961902142 61856944.0 9290.0 ENSG00000115484|ENST00000394440|CCT4;;nc|ENSG00000115484|P50991-2|CCT4 9.290504455566406 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9292 48.663 116.0 226980.0 25 0 27036.0 -1 YTMFFSTFY 9 56 611.7589757212978 1221.5033985093955 2 611.7596313357353 MULTI CID FTMS 0 0 0 9290 167476.875 0.0351549413471638 3 -0.3050727844238281 2 Oxidation (M) _YTM(Oxidation (M))FFSTFY_ ENSG00000129925|ENST00000431232|PGAP6 12.531546534597751 0.4974689918368763 3 {M(Oxidation (M))|F}Y 2 -1 22.959 0.0 0.0 1.8796 0.0 0.0 893.3614135013862 0.0 893.3614135013862 0.0 12.501225267834 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 1.8796 + + 18 + 1 1.504 26829.7 1.0 4038 5252 9290 HBL1_DMSO_200M_050219_1,9292 HBL1_DMSO_200M_050219_1,9292,YTMFFSTFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9293 48.664 20.0 2385400.0 25 0 375220.0 + 3996 DALRPSVV 8 87 428.74806273103775 855.4815725288755 2 428.7479431033134 MULTI CID FTMS 0 0 0 9290 2854281.25 0.4324656438463013 -1 0.1439704895019531 3 Unmodified _DALRPSVV_ ENSG00000089154|ENST00000300648|GCN1 39.94969957227396 0.2351327405675156 3 {[DA]|[EG]}{I|L}R[PS]VV 8 0 + 46.661 0.0 0.0 5.4543 5.4543 88.59 0.0 0.0 0.0 0.8040747723590158 0.8040747723590158 0.8040747723590158 17.793774815719203 0 1.3539171939081172 1.6989700043360187 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}R[PS]VV;W{I|L}[VG][PS]VV 5.4543;3.3743 +;- + 31 1 1.504 42682.0 1.0 4039 5252 9290 HBL1_DMSO_200M_050219_1,9293 HBL1_DMSO_200M_050219_1,9293,DALRPSVV False True DALRPSVV 48.664141 428.747943103313 60961224.0 9290.0 ENSG00000089154|ENST00000300648|GCN1 7.1053493817647295 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9294 48.665 24.0 1501200.0 25 0 110230.0 + 34021 SLKDITNVS 9 70 488.7690077817206 0 488.7690917849541 PEAK CID FTMS 0 0 0 9290 2236231.0 1.0 0 0.0 4 Unmodified _SLKDITNVS_ ENSG00000129810|ENST00000412997|SGO1;nc|ENSG00000129810|Q5FBB7-2|SGO1;nc|ENSG00000129810|Q5FBB7-3|SGO1;nc|ENSG00000129810|Q5FBB7-4|SGO1;nc|ENSG00000129810|Q5FBB7-5|SGO1;nc|ENSG00000129810|Q5FBB7|SGO1 47.74868867922204 0.0378261468855112 3 N{I|L}SEKE 6 8 39.276 0.0 0.0 4.0262 0.0 0.0 204.11222705053405 68.05133234195546 272.1635593924895 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 1.1307196863200843 0.0 N{I|L}SEKE 4.0262 - 150 + 1 1.504 33957.8 1.0 4040 5252 9290 HBL1_DMSO_200M_050219_1,9294 HBL1_DMSO_200M_050219_1,9294,SLKDITNVS True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9295 48.667 47.0 1237700.0 25 0 279250.0 + 22804 LQVYTGLFYV 10 53 401.5517172917056 1201.6333224753168 3 401.5514099001884 MULTI CID FTMS 0 0 0 9290 984248.0 0.3227559296992379 -3 0.3174400329589844 5 Unmodified _LQVYTGLFYV_ REV__ENSG00000197177|ENST00000392607|ADGRA1;REV__nc|ENSG00000197177|Q86SQ6-1|ADGRA1;REV__nc|ENSG00000197177|Q86SQ6-2|ADGRA1 2.9952420565917617 0.7127817445270067 3 [{I|L}P]D 3 -1 13.512 0.0 0.0 1.1244 0.0 0.0 0.0 873.4548306142418 873.4548306142418 8.027194418743806 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [{I|L}P]D 1.1244 - 6 1 1.504 50634.7 1.0 4041 5252 9290 HBL1_DMSO_200M_050219_1,9295 HBL1_DMSO_200M_050219_1,9295,LQVYTGLFYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9296 48.668 61.0 612490.0 25 0 112380.0 + -1 VSIDFRCED 9 69 570.7546468581762 1139.4947407831523 2 570.7548095583916 MULTI CID FTMS 0 0 0 9290 884032.5625 0.261083899055806 -1 0.1439704895019531 6 Carbamidomethyl (C) _VSIDFRC(Carbamidomethyl (C))ED_ REV__ENSG00000113163|ENST00000643780|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-2|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1 19.256988751693697 0.3154191944385105 3 [VS]{I|L} 3 -1 37.76 0.0 0.0 3.3137 0.0 0.0 0.0 837.2869967096311 837.2869967096311 24.814309196763706 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 [VS]{I|L} 3.3137 + + 114 + 1 1.504 35977.6 1.0 4042 5252 9290 HBL1_DMSO_200M_050219_1,9296 HBL1_DMSO_200M_050219_1,9296,VSIDFRCED False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9297 48.67 63.0 943210.0 25 0 107500.0 + 3576 DAAELAQHV 9 88 477.2377440079133 952.4609350826264 2 477.2383911013603 MULTI CID FTMS 0 0 0 9290 869382.375 0.1913829636651174 -1 0.1439704895019531 7 Unmodified _DAAELAQHV_ ENSG00000213015|ENST00000325333|ZNF580 56.17704186161178 0.0281986971544335 3 {[DA]|[EG]}AE{I|L}AQHV 9 0 + 79.927 0.0 0.0 8.3916 8.3916 95.761 0.0 0.0 0.0 57.00827206916173 8.908555305749317 8.908555305749317 14.208187539523747 0 1.305462187404089 1.6989700043360187 0.4247425010840047 0.5 + + {[DA]|[EG]}AE{I|L}AQHV;{[DA]|[EG]}AE{I|L}A[AG]HV;{[DA]|[EG]}AEV{[NV]|[RG]}HV 8.3916;6.8999;5.7962 +;-;- + 270 + 1 1.504 53835.1 1.0 4043 5252 9290 HBL1_DMSO_200M_050219_1,9297 HBL1_DMSO_200M_050219_1,9297,DAAELAQHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9298 48.671 80.0 563460.0 25 0 108880.0 + 43711 YCAEIAHNV 9 71 510.2343215099534 1018.4540900867069 2 510.2345764040947 MULTI CID FTMS 0 0 0 9290 653733.0625 0.5719255471435242 -1 0.1439704895019531 8 Unmodified _YCAEIAHNV_ ENSG00000144713|ENST00000429711|RPL32;ENST00000458542.1_1_3:25791186-25791384:+|nuORF 45.69961567697781 0.0497987121815769 3 YCAE{I|L}AH{[NV]|[RG]} 9 0 + 76.811 0.0 0.0 7.5419 7.5419 93.626 0.0 0.0 0.0 67.34666109634381 5.263685067960239 5.263685067960239 11.40662954540997 0 1.1861818737241734 2.0 0.0 0.2887254899964357 + + YCAE{I|L}AH{[NV]|[RG]};YCAE{I|L}AHAAA;Y[YG]N{[CP]|[EA]}[R{M(Oxidation (M))|F}];Y[YG]N{[VA]|[{I|L}G]}[W{M(Oxidation (M))|F}] 7.5419;6.4219;0.74864;0.51001 +;-;-;- + 287 + 1 1.504 44895.4 1.0 4044 5252 9290 HBL1_DMSO_200M_050219_1,9298 HBL1_DMSO_200M_050219_1,9298,YCAEIAHNV True True YCAEIAHNV 48.671464 510.234576404095 19830322.5 9290.0 ENSG00000144713|ENST00000429711|RPL32;;ENST00000458542.1_1_3:25791186-25791384:+|nuORF 10.423765500386557 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9299 48.674 105.0 1250700.0 25 0 121550.0 23520 LTKMRPVKSS 10 116 573.8345247441038 1145.6544965550074 2 573.8344604372978 MULTI CID FTMS 0 0 0 9290 546925.0 0.0662070035794211 -3 0.3174400329589844 9 Unmodified _LTKMRPVKSS_ ENST00000555502.5_1_2:223184014-223186236:+|nuORF 11.494710602746466 0.654671931888957 3 [VP]VSKHVPV{[QG]|[NA]} 11 9 + 67.74 0.0 0.0 5.9127 5.9127 81.931 0.0 0.0 0.0 14.357285695614364 27.301373021504347 14.357285695614364 3.979400086720368 0 0.5 1.0 1.1549471895720984 0.0 [VP]VSKHVPV{[QG]|[NA]};[VP]SKVHVPV{[QG]|[NA]};[VP]SVKHVPV{[QG]|[NA]};[VP]VSKPVHV{[QG]|[NA]};[VP]SKVPVHV{[QG]|[NA]};[VP]SVKPVHV{[QG]|[NA]};[VP]V[HK]SVPV{[QG]|[NA]};[KS][VP]VHVPV{[QG]|[NA]};[{I|L}T][PA]KHVPV{[QG]|[NA]};[KS][VP]VPVHV{[QG]|[NA]} 5.9127;5.5654;5.3026;4.9669;4.6195;4.3568;4.2761;3.666;3.4225;2.7201 -;-;-;-;-;-;-;-;-;- 755 1 1.504 105842.2 1.0 4045 5252 9290 HBL1_DMSO_200M_050219_1,9299 HBL1_DMSO_200M_050219_1,9299,LTKMRPVKSS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9300 48.676 97.0 1066300.0 25 0 83155.0 + 29806 QQHPAFSGV 9 125 485.74080586303336 969.4670587928669 2 485.7407409548759 MULTI CID FTMS 0 0 0 9290 482127.6875 0.4564739647969051 -1 0.1439704895019531 10 Unmodified _QQHPAFSGV_ ENSG00000165271|ENST00000297990|NOL6;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6 42.09456458481378 0.0639583784996157 3 EYHSGV 6 5 25.851 0.0 0.0 2.6666 0.0 0.0 279.1422337646528 0.0 279.1422337646528 0.0 9.680475292681262 0.0 0.0 0 0.5924778212679485 0.0 0.3807196863200844 0.0 EYHSGV 2.6666 - 860 + 1 1.504 83747.2 1.0 4046 5252 9290 HBL1_DMSO_200M_050219_1,9300 HBL1_DMSO_200M_050219_1,9300,QQHPAFSGV True True QQHPAFSGV 48.675808 485.740740954876 4904376.5 9290.0 ENSG00000165271|ENST00000297990|NOL6;;nc|ENSG00000165271|Q9H6R4-2|NOL6;;nc|ENSG00000165271|Q9H6R4-4|NOL6 7.553247610727946 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9301 48.678 125.0 989830.0 25 0 111010.0 + 11483 GIIKQDPKL 9 101 337.87810075397203 1010.6124728621162 3 337.8778259158134 MULTI CID FTMS 0 0 0 9290 451499.71875 0.0560355811579093 14 -1.4521560668945312 11 Unmodified _GIIKQDPKL_ ENSG00000103365|ENST00000309859|GGA2 25.399314129420983 0.2080152500878129 3 {[VA]|[{I|L}G]}[NS]{I|L}P 6 6 28.332 0.0 0.0 2.8034 0.0 0.0 0.0 426.27400785650985 426.27400785650985 16.16460270953162 0.0 0.0 0.0 0 0.0 2.0 0.0 0.9802046884880938 {[VA]|[{I|L}G]}[NS]{I|L}P 2.8034 - 92 1 1.504 107198.4 1.0 4047 5252 9290 HBL1_DMSO_200M_050219_1,9301 HBL1_DMSO_200M_050219_1,9301,GIIKQDPKL False True GIIKQDPKL 48.678364 337.877825915813 4692153.0 9290.0 ENSG00000103365|ENST00000309859|GGA2 6.038444519042969 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9302 48.681 104.0 451550.0 25 0 68288.0 + 27581 HPLPEVAHV 9 82 499.274702651945 996.53485237069 2 499.7752258181572 MULTI CID FTMS 0 0 0 9290 425651.40625 0.6790760531955775 -1 0.1439704895019531 12 Unmodified _PLDAVCVLPA_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000569997.1_1_16:85838427-85838718:+|nuORF;ENST00000567266.5_1_16:85833348-85838718:+|nuORF 10.823927491677226 0.6659270209832991 3 [{I|L}P]DAH 5 6 33.672 0.0 0.0 3.3789 0.0 0.0 0.0 460.2529669549276 460.2529669549276 22.95880017344075 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.0 [{I|L}P]DAH 3.3789 - 111 1 1.504 43898.6 1.0 4048 5252 9290 HBL1_DMSO_200M_050219_1,9302 HBL1_DMSO_200M_050219_1,9302,PLDAVCVLPA False False HPLPEVAHV 48.680587 499.775225818157 7723284.5 9290.0 ENSG00000131143|ENST00000253452|COX4I1;;ENST00000569997.1_1_16:85838427-85838718:+|nuORF;;ENST00000567266.5_1_16:85833348-85838718:+|nuORF 3.773616631825765 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9303 48.683 106.0 784200.0 25 0 79225.0 + 17766 KQFEKQVEL 9 104 383.5483230032284 0 383.5483581423759 PEAK CID FTMS 0 0 0 9290 313662.34375 0.3900093566233469 -1 0.1439704895019531 13 Unmodified _KQFEKQVEL_ ENSG00000197102|ENST00000360184|DYNC1H1 43.85829265575387 0.0484669621479465 3 K{M(Oxidation (M))|F}EQ 4 5 20.438 0.0 0.0 2.6714 0.0 0.0 104.7224744187908 125.07225977115468 229.7947341899455 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.9247425010840048 K{M(Oxidation (M))|F}EQ 2.6714 - 42 + 1 1.504 75691.3 1.0 4049 5252 9290 HBL1_DMSO_200M_050219_1,9303 HBL1_DMSO_200M_050219_1,9303,KQFEKQVEL True True KQFEKQVEL 48.682841 383.548358142376 3617256.75 9290.0 ENSG00000197102|ENST00000360184|DYNC1H1 6.805712381998698 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9304 48.694 651.0 543680.0 25 0 55027.0 + -1 FVEGDESCEY 10 209 617.7301841649428 1233.4458153966857 2 617.7310058474541 MULTI CID FTMS 0 0 0 9290 279483.25 0.2158155357695631 -1 0.1439704895019531 14 Carbamidomethyl (C) _FVEGDESC(Carbamidomethyl (C))EY_ REV__ENSG00000167554|ENST00000403906|ZNF610;REV__nc|ENSG00000167554|Q8N9Z0-2|ZNF610 10.823927491677226 0.6659270209832991 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QDAMNA{M(Oxidation (M))|F} 9 -1 53.406 0.0 0.0 4.3298 0.0 0.0 0.0 177.9891400080052 177.9891400080052 21.608102740310365 0.0 0.0 0.0 0 0.8366968715561641 0.7695510786217261 0.0 1.4489700043360187 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QDAMNA{M(Oxidation (M))|F} 4.3298 - 2900 1 1.504 250213.6 1.0 4050 5252 9290 HBL1_DMSO_200M_050219_1,9304 HBL1_DMSO_200M_050219_1,9304,FVEGDESCEY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9305 48.707 719.0 289920.0 25 0 15488.0 -1 DFKVENAMDC 10 181 594.2386066532323 1186.4626603732645 2 594.2391235232353 MULTI CID FTMS 0 0 0 9290 233268.953125 0.80233010449651 -1 0.1439704895019531 15 Oxidation (M) _DFKVENAM(Oxidation (M))DC_ ENSG00000078177|ENST00000261435|N4BP2;nc|ENSG00000078177|Q86UW6-2|N4BP2 18.1463463914782 0.5430639438673815 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NEVRDC{[MS]|[{M(Oxidation (M))|F}A]} 10 -1 + 46.903 0.0 0.0 3.9532 3.9532 75.381 0.0 0.0 0.0 1.581398849318397 25.48432849752725 1.581398849318397 3.820684442917603 0 0.6861818737241735 0.6989700043360187 1.3807196863200843 0.805462187404089 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NEVRDC{[MS]|[{M(Oxidation (M))|F}A]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SEVRDC{[MS]|[{M(Oxidation (M))|F}A]};{[QV]|[N{I|L}]|[RA]|[KV]}DEN{M(Oxidation (M))|F}DC{[MS]|[{M(Oxidation (M))|F}A]};{[MS]|[{M(Oxidation (M))|F}A]}[RP]N{M(Oxidation (M))|F}DC{[MS]|[{M(Oxidation (M))|F}A]};{[MS]|[{M(Oxidation (M))|F}A]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VRDC{[MS]|[{M(Oxidation (M))|F}A]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NEV[VG]DC{[MS]|[{M(Oxidation (M))|F}A]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGEVRDC{[MS]|[{M(Oxidation (M))|F}A]};[VS][VG]EN{M(Oxidation (M))|F}DC{[MS]|[{M(Oxidation (M))|F}A]};[YG]QEVRDC{[MS]|[{M(Oxidation (M))|F}A]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SEV[VG]DC{[MS]|[{M(Oxidation (M))|F}A]} 3.9532;3.6312;3.4048;3.3796;3.2141;3.1808;3.1808;2.9373;2.8856;2.8588 -;-;-;-;-;-;-;-;-;- 2852 1 1.504 156266.5 1.0 4051 5252 9290 HBL1_DMSO_200M_050219_1,9305 HBL1_DMSO_200M_050219_1,9305,DFKVENAMDC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9306 48.712 315.0 349070.0 25 0 73623.0 + 6012 DSAKCNRVTL 10 98 553.7842074667799 1105.5538620003597 2 553.7847778201103 MULTI CID FTMS 0 0 0 9290 228910.390625 0.6444894029382202 -1 0.1439704895019531 16 Unmodified _DSAKCNRVTL_ REV__ENST00000311028.4_1_8:102731875-102928074:-|nuORF 14.40537977576856 0.6058337302021266 3 DMDRTRVT{I|L} 9 -1 + 48.532 0.0 0.0 4.3899 4.3899 83.249 0.0 0.0 0.0 17.977113088846668 11.800690552576684 11.800690552576684 9.710510029266366 0 0.7747111281963139 1.6989700043360187 0.0 0.3494850021680094 DMDRTRVT{I|L};{I|L}D{[C(Carbamidomethyl (C))E]|[WC]}TRVT{I|L};D{I|L}{[C(Carbamidomethyl (C))E]|[WC]}TRVT{I|L};{I|L}D[KP][Y{M(Oxidation (M))|F}]V[QP];{I|L}D[QP][Y{M(Oxidation (M))|F}]V[QP];D{I|L}[KP][Y{M(Oxidation (M))|F}]V[QP];D{I|L}[QP][Y{M(Oxidation (M))|F}]V[QP] 4.3899;3.5115;3.2392;2.3431;2.3431;2.0708;2.0708 -;-;-;-;-;-;- 212 + 1 1.504 90299.8 1.0 4052 5252 9290 HBL1_DMSO_200M_050219_1,9306 HBL1_DMSO_200M_050219_1,9306,DSAKCNRVTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9307 48.725 749.0 192960.0 25 0 19454.0 45734 YYHDETAQDE 10 125 635.7464141330641 1269.4782753329282 2 635.7478515505791 MULTI CID FTMS 0 0 0 9290 211906.0625 0.2386443580742632 2 -0.2218856811523437 17 Unmodified _YYHDETAQDE_ ENSG00000021300|ENST00000354190|PLEKHB1;ENST00000541760.1_1_11:73360074-73362936:+|nuORF;ENST00000544532.5_1_11:73360074-73362871:+|nuORF;nc|ENSG00000021300|Q9UF11-2|PLEKHB1;nc|ENSG00000021300|Q9UF11-3|PLEKHB1;nc|ENSG00000021300|Q9UF11-4|PLEKHB1 13.90604991867851 0.6142120002215601 3 YYSPSP 6 8 68.563 0.0 0.0 5.4009 0.0 0.0 0.0 572.1611422174436 572.1611422174436 52.00827206916173 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3252574989159953 0.0 YYSPSP 5.4009 - 541 + 1 1.504 107426.2 1.0 4053 5252 9290 HBL1_DMSO_200M_050219_1,9307 HBL1_DMSO_200M_050219_1,9307,YYHDETAQDE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9308 48.728 148.0 146660.0 25 0 11455.0 + -1 MTTSSGNQAFY 11 45 611.7589757212978 1221.5033985093955 2 611.9686157107353 MULTI CID FTMS 0 0 0 9290 167476.875 0.0351549413471638 3 -0.3050727844238281 18 Oxidation (M) _YTM(Oxidation (M))FFSTFY_ ENSG00000283039|ENST00000634670|KLF18 8.593279151180031 0.6146971463335029 3 QQNA{M(Oxidation (M))|F}Y 6 -1 31.828 0.0 0.0 2.6056 0.0 0.0 452.16758925605626 0.0 452.16758925605626 0.0 16.343115646969935 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 QQNA{M(Oxidation (M))|F}Y 2.6056 - 48 1 1.504 26038.6 1.0 4054 5252 9290 HBL1_DMSO_200M_050219_1,9308 HBL1_DMSO_200M_050219_1,9308,YTMFFSTFY False False MTTSSGNQAFY 48.728361 611.968615710735 54734456.0 9290.0 ENSG00000283039|ENST00000634670|KLF18 1.6883029838403063 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9309 48.734 216.0 296610.0 25 0 31325.0 43571 YADEEDSFV 9 99 537.7152137386919 1073.4158745441837 2 537.7153198122978 MULTI CID FTMS 0 0 0 9290 160736.078125 0.662041946898839 -1 0.1439704895019531 19 Unmodified _YADEEDSFV_ ENSG00000205213|ENST00000379214|LGR4;nc|ENSG00000205213|Q9BXB1-2|LGR4 8.593279151180031 0.6146971463335029 3 TV 2 8 14.993 0.0 0.0 1.3967 0.0 0.0 855.28893470219 0.0 855.28893470219 0.0 3.2100855166329545 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 TV 1.3967 - 40 + 1 1.504 61912.1 1.0 4055 5252 9290 HBL1_DMSO_200M_050219_1,9309 HBL1_DMSO_200M_050219_1,9309,YADEEDSFV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9310 48.748 800.0 212090.0 25 0 14402.0 + 38942 TVMGAELRHV 10 207 556.7974129378122 1111.5802729424242 2 557.2996703982353 MULTI CID FTMS 0 0 0 9290 163694.96875 0.0647967661382355 2 -0.2218856811523437 20 Unmodified _TVMGAELRHV_ ENSG00000160808|ENST00000292327|MYL3;ENSG00000168530|ENST00000352451|MYL1;ENSG00000198336|ENST00000393450|MYL4;nc|ENSG00000168530|P05976-2|MYL1 13.614867670302877 0.6190977555336379 3 {[TV]|[{I|L}S]}MQN 5 7 27.28 0.0 0.0 2.4542 0.0 0.0 0.0 535.2967987045644 535.2967987045644 5.8192840131933465 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}MQN 2.4542 - 2535 + 1 1.504 129714.8 0.75 4056 5252 9290 HBL1_DMSO_200M_050219_1,9310 HBL1_DMSO_200M_050219_1,9310,TVMGAELRHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9312 48.752 21.0 1629700.0 25 0 207630.0 8628 EVEEDEYKAFY 11 61 711.3069763201012 1420.5993997070022 2 711.3080322146416 MULTI CID FTMS 0 0 0 9311 2493678.0 0.0623683006070064 3 -0.33453369140625 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 3 [QA]HDEAQNQA{M(Oxidation (M))|F}Y 12 8 + 71.284 0.0 0.0 5.0179 5.0179 77.371 0.0 0.0 0.0 7.491596866368013 54.2947379546127 7.491596866368013 3.0102999566398125 0 0.8935078169319297 0.0 0.0 1.579689690656103 [QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQN[AG]A{M(Oxidation (M))|F}Y;[QA]HDEAQGGQA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]NQA{M(Oxidation (M))|F}Y;[QA]E[HD]AQNQA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QNA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;[QA]E[HD]AQQNA{M(Oxidation (M))|F}Y 5.0179;4.806;4.3775;4.3775;4.3775;4.1937;4.1656;4.1656;4.1656;3.9818 -;-;-;-;-;-;-;-;-;- 434 1 1.508 31701.3 1.0 4057 5253 9311 HBL1_DMSO_200M_050219_1,9312 HBL1_DMSO_200M_050219_1,9312,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9313 48.754 59.0 795290.0 25 0 109100.0 + + 45330 SIPENVSTHV 10 72 541.2849379311228 1080.5553229290456 2 541.2854492068291 MULTI CID FTMS 0 0 0 9311 388571.84375 0.0590431391451784 3 -0.33453369140625 2 Unmodified _YSLERNTAK_ ENSG00000138160|ENST00000260731|KIF11;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 14.838274106304384 0.4350285940865338 3 {I|L}[MT] 3 -1 14.705 0.0 0.0 1.3609 0.0 0.0 717.3757940637664 0.0 717.3757940637664 0.0 -1.4928876664371398 -1.4928876664371398 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}[MT] 1.3609 - 56 1 1.508 42804.6 1.0 4058 5253 9311 HBL1_DMSO_200M_050219_1,9313 HBL1_DMSO_200M_050219_1,9313,YSLERNTAK False False SIPENVSTHV 48.753653 541.285449206829 3574170.5 9311.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 2.525515000025431 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9314 48.755 29.0 1530500.0 25 0 99204.0 + 30116 QVISQAAVVHA 11 80 561.8167316392003 1121.6189103452004 2 561.8172485232353 MULTI CID FTMS 0 0 0 9311 1877443.875 0.4075436744129052 -1 0.0918312072753906 3 Unmodified _QVISQAAVVHA_ ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1;nc|ENSG00000176623|Q96DB5-3|RMDN1 53.832793166522166 0.0964040679835549 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SQAAVV[HA] 11 0 + 70.565 0.0 0.0 6.2914 6.2914 87.856 0.0 0.0 0.0 47.76594241816031 7.367585652254178 7.367585652254178 9.128498242810991 0 0.7614393726401688 1.6989700043360187 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SQAAVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S[AG]AAVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SQ[Q{I|L}]V[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S[VG]NVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S[AG][Q{I|L}]V[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S[VG]GGVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}[KS][PS]AVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}[QT]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VV[PS]AVV[HA];[HV][H{I|L}]MVK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 6.2914;5.4775;4.8385;4.403;4.0214;3.5891;2.9882;2.6602;1.8436;1.7503 +;-;-;-;-;-;-;-;-;- + 525 + 1 1.508 41904.4 1.0 4059 5253 9311 HBL1_DMSO_200M_050219_1,9314 HBL1_DMSO_200M_050219_1,9314,QVISQAAVVHA True True QVISQAAVVHA 48.754832 561.817248523235 64695964.0 9311.0 ENSG00000176623|ENST00000406452|RMDN1;;nc|ENSG00000176623|Q96DB5-2|RMDN1;;nc|ENSG00000176623|Q96DB5-3|RMDN1 6.583058834075928 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9315 48.756 49.0 1368200.0 25 0 131900.0 + 25640 NFQTAKESL 9 106 519.2674622173017 1036.5203715014034 2 519.2682372927666 MULTI CID FTMS 0 0 0 9311 1040190.5 1.0 0 0.0 4 Unmodified _NFQTAKESL_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 49.55428908609986 0.0413471690215031 3 ATQSR 5 7 29.3 0.0 0.0 2.8268 0.0 0.0 475.263971795387 0.0 475.263971795387 0.0 17.08195485977134 0.0 0.0 0 0.7376954943324545 0.0 0.4247425010840047 0.5 ATQSR 2.8268 - 721 1 1.508 54716.8 1.0 4060 5253 9311 HBL1_DMSO_200M_050219_1,9315 HBL1_DMSO_200M_050219_1,9315,NFQTAKESL True True NFQTAKESL 48.756147 519.268237292767 7865700.0 9311.0 nc|ENSG00000129003|Q709C8-3|VPS13C;;ENSG00000129003|ENST00000644861|VPS13C;;nc|ENSG00000129003|Q709C8-4|VPS13C;;nc|ENSG00000129003|Q709C8-2|VPS13C 6.445672671000163 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9316 48.758 69.0 984180.0 25 0 290460.0 + 18906 LAVVMMKQL 9 68 516.8013932077666 1031.5882334823332 2 516.8011962771416 MULTI CID FTMS 0 0 0 9311 710962.9375 0.3741848161464691 -2 0.2358016967773437 5 Unmodified _LAVVMMKQL_ REV__ENSG00000137414|ENST00000259963|FAM8A1 8.155526934196011 0.6299788542272896 3 {I|L} 1 -1 16.466 0.0 0.0 1.5962 0.0 0.0 900.493413391316 0.0 900.493413391316 0.0 9.47621246364342 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.5962 + + 19 + 1 1.508 56718.3 1.0 4061 5253 9311 HBL1_DMSO_200M_050219_1,9316 HBL1_DMSO_200M_050219_1,9316,LAVVMMKQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9317 48.76 109.0 387650.0 25 0 31065.0 + 13174 HFVPGTTAV 9 69 464.74795308162254 927.4813532300452 2 464.7479736208916 MULTI CID FTMS 0 0 0 9311 569675.125 1.0 0 0.0 6 Unmodified _HFVPGTTAV_ ENSG00000205220|ENST00000358514|PSMB10;ENST00000574576.2_1_16:67968465-67968768:-|nuORF 14.581692164780916 0.4419739649577144 3 AV 2 7 17.959 0.0 0.0 1.9363 0.0 0.0 739.3647435882467 0.0 739.3647435882467 0.0 7.501225267834 0.0 0.0 0 0.0 0.0 0.0 0.0 + AV 1.9363 + + 51 + 1 1.508 36368.9 1.0 4062 5253 9311 HBL1_DMSO_200M_050219_1,9317 HBL1_DMSO_200M_050219_1,9317,HFVPGTTAV False True HFVPGTTAV 48.76008 464.747973620892 12356605.0 9311.0 ENST00000574576.2_1_16:67968465-67968768:-|nuORF;;ENSG00000205220|ENST00000358514|PSMB10 8.239223798116049 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9318 48.762 88.0 830770.0 25 0 81268.0 + 42694 VTWLPAVVV 9 102 492.2978879307647 982.5812229283296 2 492.2981750369072 MULTI CID FTMS 0 0 0 9311 567105.625 0.0107767290825212 -3 0.3170852661132812 7 Unmodified _VTWLPAVVV_ ENSG00000154309|ENST00000675850|DISP1 44.40701690623563 0.0526327925666318 3 [VP]AW{I|L}TV 7 6 47.228 0.0 0.0 4.8065 0.0 0.0 0.0 213.1241158008352 213.1241158008352 32.27970387566863 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.805462187404089 0.0 [VP]AW{I|L}TV 4.8065 - 223 1 1.508 59854.3 1.0 4063 5253 9311 HBL1_DMSO_200M_050219_1,9318 HBL1_DMSO_200M_050219_1,9318,VTWLPAVVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9319 48.765 147.0 514170.0 25 0 23087.0 + 41815 VPWKQRTGI 9 109 362.2139389930126 1083.619987579238 3 362.2136718630791 MULTI CID FTMS 0 0 0 9311 546300.125 1.0 0 0.0 8 Unmodified _VPWKQRTGI_ ENSG00000166199|ENST00000302708|ALKBH3;ENST00000532129.1_1_11:43911323-43923100:+|nuORF;ENST00000532410.1_1_11:43905559-43940676:+|nuORF;ENST00000533200.5_1_11:43904193-43919192:+|nuORF;nc|ENSG00000166199|Q96Q83-2|ALKBH3 7.477065608646677 0.6536635950281682 3 VPWKQ 5 4 36.454 0.0 0.0 3.3641 0.0 0.0 0.0 442.2420443170532 442.2420443170532 26.075046625430254 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + VPWKQ 3.3641 + + 91 + 1 1.508 76282.2 1.0 4064 5253 9311 HBL1_DMSO_200M_050219_1,9319 HBL1_DMSO_200M_050219_1,9319,VPWKQRTGI False True VPWKQRTGI 48.764955 362.213671863079 1724545.25 9311.0 ENST00000532129.1_1_11:43911323-43923100:+|nuORF;;ENST00000532410.1_1_11:43905559-43940676:+|nuORF;;nc|ENSG00000166199|Q96Q83-2|ALKBH3;;ENSG00000166199|ENST00000302708|ALKBH3;;ENST00000533200.5_1_11:43904193-43919192:+|nuORF 5.093417485555013 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9320 48.767 115.0 768120.0 25 0 78193.0 45359 YSRAPRVAL 9 68 344.86979806824434 1031.587564804933 3 344.8694640994072 MULTI CID FTMS 0 0 0 9311 507614.375 0.3427348977428481 -2 0.2358016967773437 9 Unmodified _YSRAPRVAL_ ENST00000376723.7_1_2:128849017-128855062:+|nuORF 18.373094154950223 0.3393451798331396 3 VA{I|L} 3 6 27.664 0.0 0.0 2.6817 0.0 0.0 730.3880169898061 0.0 730.3880169898061 0.0 16.694699959806982 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + VA{I|L} 2.6817 + + 45 1 1.508 75385.4 1.0 4065 5253 9311 HBL1_DMSO_200M_050219_1,9320 HBL1_DMSO_200M_050219_1,9320,YSRAPRVAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9321 48.772 272.0 399450.0 25 0 32706.0 + -1 YEKFCCLCQRQ 11 94 796.3423257789123 1590.6700986246244 2 796.3420898318291 MULTI CID FTMS 0 0 0 9311 402964.90625 0.8097923702701191 -1 0.0918312072753906 10 3 Carbamidomethyl (C) _YEKFC(Carbamidomethyl (C))C(Carbamidomethyl (C))LC(Carbamidomethyl (C))QRQ_ REV__ENSG00000115464|ENST00000398571|USP34 4.897010918128616 0.8520435188433833 3 {[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}YQ 14 -1 + 98.615 0.0 0.0 6.1996 6.1996 86.338 0.0 0.0 0.0 3.9290565738859016 61.47007071749361 3.9290565738859016 7.37366395250325 0 0.8807196863200843 0.7695510786217261 0.6747425010840047 1.045114016114533 {[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HN]EA[AG]QNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HN]EAQQGGA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HN]EAQ[AG]NA{M(Oxidation (M))|F}YQ;[YE][NS]EAQQNA{M(Oxidation (M))|F}YQ;[HD]G[PS]EAQQNA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F}YQ 6.1996;5.736;5.6306;5.6306;5.6306;5.4747;5.1733;5.1657;5.1657;5.1657 -;-;-;-;-;-;-;-;-;- 2297 1 1.508 77896.0 1.0 4066 5253 9311 HBL1_DMSO_200M_050219_1,9321 HBL1_DMSO_200M_050219_1,9321,YEKFCCLCQRQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9322 48.778 278.0 275090.0 25 0 39096.0 + 42161 VSCWLTHCV 9 114 524.2406186639206 1046.466684394641 2 524.2408325076103 MULTI CID FTMS 0 0 0 9311 306942.15625 0.0966085826620538 3 -0.33453369140625 11 Unmodified _VSCWLTHCV_ REV__ENSG00000136378|ENST00000388820|ADAMTS7;REV__ENST00000568712.1_1_15:79063704-79103562:-|nuORF 15.847184025352805 0.4077185912009129 3 [VS][{M(Oxidation (M))|F}V]Q{M(Oxidation (M))|F}DD 8 -1 35.935 0.0 0.0 3.4339 0.0 0.0 0.0 106.04160486392811 106.04160486392811 14.065401804339556 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 [VS][{M(Oxidation (M))|F}V]Q{M(Oxidation (M))|F}DD 3.4339 - 317 + 1 1.508 68239.2 1.0 4067 5253 9311 HBL1_DMSO_200M_050219_1,9322 HBL1_DMSO_200M_050219_1,9322,VSCWLTHCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9323 48.789 682.0 312520.0 25 0 20246.0 + 19705 LGLWLTPLV 9 229 506.3139596467041 1010.6133663602084 2 506.3142578005791 MULTI CID FTMS 0 0 0 9311 293999.4375 0.1051870978833113 15 -1.5371017456054688 12 Unmodified _LGLWLTPLV_ REV__ENST00000432519.5_1_3:16358194-16358338:-|nuORF 30.22481116460888 0.1466181017706357 3 {I|L}G{I|L} 3 -1 37.734 0.0 0.0 3.7338 0.0 0.0 0.0 724.4027193658811 724.4027193658811 13.834006526680277 0.0 0.0 0.0 0 0.4802046884880938 1.3010299956639813 0.0 0.0 {I|L}G{I|L} 3.7338 + + 941 + 1 1.508 165058.8 1.0 4068 5253 9311 HBL1_DMSO_200M_050219_1,9323 HBL1_DMSO_200M_050219_1,9323,LGLWLTPLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9324 48.803 800.0 354590.0 25 0 77610.0 + -1 AYMPPTSEA 9 125 966.4326234561798 1930.85069397916 2 966.4296752810478 MULTI CID FTMS 0 0 0 9311 280474.25 0.1475792285133461 -9 0.7972412109375 13 nc|ENSG00000231925|O15533-4|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;ENSG00000231925|ENST00000434618|TAPBP 3 E{M(Oxidation (M))|F}DQ 4 -1 26.16 0.0 0.0 1.3548 0.0 0.0 1054.4801714899177 354.1673209465151 1408.647492436433 0.0 0.0 0.0 0.0 0 0.0 0.0 1.024227503252014 0.0 E{M(Oxidation (M))|F}DQ 1.3548 - 3461 + 1 1.508 185752.1 0.959999978542328 4069 5253 9311 HBL1_DMSO_200M_050219_1,9324 HBL1_DMSO_200M_050219_1,9324, False False AYMPPTSEA 48.803244 966.429675281048 773646.6875 9311.0 nc|ENSG00000231925|O15533-4|TAPBP;;nc|ENSG00000231925|O15533-3|TAPBP;;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;;nc|ENSG00000231925|O15533-2|TAPBP;;ENSG00000231925|ENST00000434618|TAPBP 5.984278678894043 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9325 48.816 709.0 164340.0 25 0 28691.0 -1 DFSEHNCQPYY 11 102 730.28124214656 1458.54793135992 2 731.2887451052666 MULTI CID FTMS 0 0 0 9311 283174.9375 0.653971370775998 2 -0.2132415771484375 14 Carbamidomethyl (C) _DFSEHNC(Carbamidomethyl (C))QPYY_ ENSG00000047634|ENST00000380041|SCML1;nc|ENSG00000047634|Q9UN30-1|SCML1;nc|ENSG00000047634|Q9UN30-2|SCML1 13.042465956692816 0.7638483625850725 3 [YT]{M(Oxidation (M))|F}DDA 6 -1 35.22 0.0 0.0 2.4148 0.0 0.0 0.0 743.2552946842136 743.2552946842136 16.408103009885764 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.4049471895720984 0.0 [YT]{M(Oxidation (M))|F}DDA 2.4148 - 758 1 1.508 85876.1 1.0 4070 5253 9311 HBL1_DMSO_200M_050219_1,9325 HBL1_DMSO_200M_050219_1,9325,DFSEHNCQPYY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9326 48.818 121.0 269770.0 25 0 11717.0 + -1 GSKSPKKCH 9 77 535.7731360441948 1069.5317191551894 2 535.7742187380791 MULTI CID FTMS 0 0 0 9311 265536.25 0.1739712182456808 3 -0.33453369140625 15 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))GSKSPKKC(Carbamidomethyl (C))H_ REV__ENST00000164247.5_1_1:6094826-6100611:+|nuORF;REV__ENST00000435937.5_1_1:6087512-6100611:+|nuORF 4.75600775471527 0.7486543447549536 3 {[DA]|[EG]}E 3 -1 17.28 0.0 0.0 1.6157 0.0 0.0 0.0 751.4023605948956 751.4023605948956 6.311056041451625 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[DA]|[EG]}E 1.6157 - 16 1 1.508 29255.9 1.0 4071 5253 9311 HBL1_DMSO_200M_050219_1,9326 HBL1_DMSO_200M_050219_1,9326,GSKSPKKCH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9327 48.831 689.0 95476.0 25 0 10369.0 + 28810 PYVSVSFPVAC 11 105 584.7900504322074 1167.5655479312147 2 584.7897827029228 MULTI CID FTMS 0 0 0 9311 260261.203125 1.0 0 0.0 16 Unmodified _PYVSVSFPVAC_ REV__ENST00000379731.4_1_9:33110948-33111104:-|nuORF 19.256988751693697 0.6345794173041263 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVV[NS]TV 9 -1 36.811 0.0 0.0 3.1528 0.0 0.0 0.0 218.06668253498347 218.06668253498347 15.435684192258002 0.0 0.0 0.0 0 0.0 0.9208187539523752 2.3807196863200843 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVV[NS]TV 3.1528 - 564 1 1.508 57013.9 1.0 4072 5253 9311 HBL1_DMSO_200M_050219_1,9327 HBL1_DMSO_200M_050219_1,9327,PYVSVSFPVAC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9328 48.845 800.0 340890.0 25 0 36474.0 + 29179 QGDADYEYFY 10 216 424.16674352183946 1269.4784011657184 3 424.1671020388603 MULTI CID FTMS 0 0 0 9311 259823.453125 0.1795843706409859 3 -0.33453369140625 17 Unmodified _QGDADYEYFY_ REV__ENSG00000009694|ENST00000371130|TENM1;REV__nc|ENSG00000009694|Q9UKZ4-2|TENM1 10.073929032068715 0.6785112666868882 3 YY[WC(Carbamidomethyl (C))]SP 6 -1 30.512 0.0 0.0 2.4035 0.0 0.0 0.0 410.13386690474687 410.13386690474687 1.4572611767298405 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.6989700043360187 0.0 YY[WC(Carbamidomethyl (C))]SP 2.4035 - 957 1 1.508 212625.0 0.9200000166893004 4073 5253 9311 HBL1_DMSO_200M_050219_1,9328 HBL1_DMSO_200M_050219_1,9328,QGDADYEYFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9329 48.859 800.0 534210.0 25 0 68785.0 -1 0 253 450.2330431686763 449.2257667020763 1 450.2632934451103 MULTI CID FTMS 0 0 0 9311 115164.734375 0.908878117017267 -1 0.0918312072753906 18 3 {[VA]|[{I|L}G]}N{M(Oxidation (M))|F} 4 -1 + 33.651 0.0 0.0 7.4909 7.4909 81.868 0.0 0.0 0.0 1.0469353380515471 4.515449934959715 1.0469353380515471 1.0469353380515471 0 0.6747425010840047 0.7695510786217261 0.0 0.0 {[VA]|[{I|L}G]}N{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F};{[VA]|[{I|L}G]}GG{M(Oxidation (M))|F};{[NV]|[RG]}A{M(Oxidation (M))|F};{[QG]|[NA]}V{M(Oxidation (M))|F};[KS]C{I|L} 7.4909;7.2579;6.9623;4.1535;3.3043;2.4226 -;-;-;-;-;- 159 1 1.508 326108.3 0.8899999856948853 4074 5253 9311 HBL1_DMSO_200M_050219_1,9329 HBL1_DMSO_200M_050219_1,9329, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9330 48.874 800.0 206120.0 25 0 14862.0 + -1 YFMLYVCGQFY 11 125 745.8306831558343 1489.6468133784686 2 745.8307372927666 MULTI CID FTMS 0 0 0 9311 213607.609375 1.0 0 0.0 19 Carbamidomethyl (C) _YFMLYVC(Carbamidomethyl (C))GQFY_ REV__ENST00000464374.5_1_2:166785584-166810215:-|nuORF;REV__nc|ENSG00000123607|Q7Z4L5-2|TTC21B 10.073929032068715 0.8255972128077141 3 {[HG]|PP}QPPPMCQDA{M(Oxidation (M))|F}Y 13 -1 + 95.584 0.0 0.0 6.4165 6.4165 84.518 0.0 0.0 0.0 4.771212547196626 10.696083918116416 4.771212547196626 4.771212547196626 0 1.309894379144197 0.0 0.0 1.7249073637206092 {[HG]|PP}QPPPMCQDA{M(Oxidation (M))|F}Y;[QP]PPPPMCQDA{M(Oxidation (M))|F}Y;{[HG]|PP}QPPMPCQDA{M(Oxidation (M))|F}Y;{[HG]|PP}QPPD{I|L}CQDA{M(Oxidation (M))|F}Y;{[HG]|PP}QPPPMC[AG]DA{M(Oxidation (M))|F}Y;{[HG]|PP}QPMPPCQDA{M(Oxidation (M))|F}Y;{[HG]|PP}QPPPMCQW{M(Oxidation (M))|F}Y;[QP]PPPMPCQDA{M(Oxidation (M))|F}Y;[QP]PPPD{I|L}CQDA{M(Oxidation (M))|F}Y;[QP]PPPPMC[AG]DA{M(Oxidation (M))|F}Y 6.4165;6.0962;5.9473;5.8492;5.8075;5.7452;5.6855;5.627;5.5289;5.4872 -;-;-;-;-;-;-;-;-;- 6534 1 1.508 119335.0 0.8799999952316284 4075 5253 9311 HBL1_DMSO_200M_050219_1,9330 HBL1_DMSO_200M_050219_1,9330,YFMLYVCGQFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9331 48.878 210.0 731400.0 25 0 63359.0 27946 PLVEAARL 8 138 434.7662036322309 867.5178543312618 2 434.7657958865166 MULTI CID FTMS 0 0 0 9311 197216.875 0.1759642435919241 -9 0.7972412109375 20 Unmodified _PLVEAARL_ ENST00000370440.5_1_1:91486896-91487022:-|nuORF 38.15118350030904 0.2652218139009398 3 {I|L}PPS[VS]R{I|L} 8 6 + 61.169 0.0 0.0 7.051 7.051 94.996 0.0 0.0 0.0 38.46069699644858 6.699784405891769 6.699784405891769 46.29946759294543 0 0.3807196863200844 2.0 0.3494850021680094 0.3054621874040891 {I|L}PPS[VS]R{I|L};{I|L}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GP{I|L};{I|L}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}APV;{I|L}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}[PG] 7.051;1.714;0.93298;0.45975 -;-;-;- 240 + 1 1.508 123083.4 1.0 4076 5253 9311 HBL1_DMSO_200M_050219_1,9331 HBL1_DMSO_200M_050219_1,9331,PLVEAARL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9333 48.882 11.0 4541700.0 25 0 510330.0 + 24966 MPPPPPQGV 9 70 460.2385793050109 918.462605676822 2 460.2390014529228 MULTI CID FTMS 0 0 0 9332 4843322.0 0.1608894913160662 31 -2.652164459228516 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 42.96799951952854 0.0591636306142405 3 [VG]EHPPQR 8 6 + 45.087 0.0 0.0 4.9089 4.9089 81.521 0.0 0.0 0.0 6.989700043360188 10.924778212679485 6.989700043360188 6.817496819840656 0 0.7742275032520141 1.6989700043360187 0.0 0.0 [VG]EHPPQR;[VG]EPHPQR;[PS]THPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{[HG]|PP}NNPPQR;[PS]TPHPQR;{[HG]|PP}GGNPPQR;{[HG]|PP}NGGPPQR;{[HG]|PP}GGGGPPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR 4.9089;4.1666;4.1479;3.9369;3.5229;3.4056;2.5145;2.5145;1.5119;1.1107 -;-;-;-;-;-;-;-;-;- 248 1 1.508 43731.6 1.0 4077 5254 9332 HBL1_DMSO_200M_050219_1,9333 HBL1_DMSO_200M_050219_1,9333,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9334 48.883 31.0 1462300.0 25 0 205630.0 + 3169 AVTSVAKVV 9 78 437.2737498352554 872.5329467373109 2 437.2738525271416 MULTI CID FTMS 0 0 0 9332 1227568.0 0.1963958753551228 1 -0.0831871032714843 2 Unmodified _AVTSVAKVV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 46.020951573049366 0.0490941689151868 3 {[VA]|[{I|L}G]}TSKV 6 3 46.929 0.0 0.0 5.3785 0.0 0.0 0.0 284.16085136061093 284.16085136061093 28.001444527144272 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.6747425010840047 0.0 {[VA]|[{I|L}G]}TSKV 5.3785 - 332 1 1.508 41700.3 1.0 4078 5254 9332 HBL1_DMSO_200M_050219_1,9334 HBL1_DMSO_200M_050219_1,9334,AVTSVAKVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9335 48.885 6.2 7807500.0 25 0 630370.0 + 13020 HASQPSLTV 9 75 470.2484443846493 938.4823358360984 2 470.2485229372978 MULTI CID FTMS 0 0 0 9332 9791447.0 0.6922568969599566 -1 0.1300544738769531 3 Unmodified _HASQPSLTV_ ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000175387|Q15796-2|SMAD2 46.020951573049366 0.0490941689151868 3 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[TV]|[{I|L}S]} 8 5 + 35.869 0.0 0.0 3.822 3.822 76.842 0.0 0.0 0.0 5.332596431019848 5.484550065040274 5.332596431019848 5.332596431019848 0 0.5 1.0457574905606752 0.8807196863200843 0.0 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[TV]|[{I|L}S]};[HA]{[QS]|[NT]}[PS]{I|L}{[TV]|[{I|L}S]};[HA]{[QS]|[NT]}V[TP]{[TV]|[{I|L}S]};[{I|L}T]V{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[TV]|[{I|L}S]};[HA]{[QS]|[NT]}V{[VA]|[{I|L}G]}EV;[PS][Y{I|L}]{M(Oxidation (M))|F}{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[TP]A[HN]{[TV]|[{I|L}S]};[PS][{I|L}T]A[HN]{[TV]|[{I|L}S]};[{I|L}T][PS]A[HN]{[TV]|[{I|L}S]};[PS][TA][HN]{I|L}{[TV]|[{I|L}S]} 3.822;3.2538;3.0418;2.8109;2.0157;1.6938;1.4026;0.4432;0.39157;0.33157 -;+;-;-;-;-;-;-;-;- + 209 1 1.508 47525.7 1.0 4079 5254 9332 HBL1_DMSO_200M_050219_1,9335 HBL1_DMSO_200M_050219_1,9335,HASQPSLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9336 48.886 13.0 5979000.0 25 0 638430.0 + 3657 DAEMTTRMV 9 82 527.238406153333 1052.462259373466 2 527.2389404177666 MULTI CID FTMS 0 0 0 9332 4521278.5 0.0554413287108013 -2 0.2218856811523437 4 Unmodified _DAEMTTRMV_ ENSG00000205220|ENST00000358514|PSMB10 49.55428908609986 0.0413471690215031 3 {[DA]|[EG]}EMTTRMV 9 0 + 83.207 0.0 0.0 7.9059 7.9059 96.415 0.0 0.0 0.0 47.62344142273139 5.3387412958179965 5.3387412958179965 26.4659125070036 0 1.424742501084005 1.6989700043360187 0.8494850021680094 0.0 + + {[DA]|[EG]}EMTTRMV;{[DA]|[EG]}E[W{M(Oxidation (M))|F}]RMV;{[DA]|[EG]}{M(Oxidation (M))|F}[DV]TRMV;{[DA]|[EG]}E[{M(Oxidation (M))|F}T]WWV;{[DA]|[EG]}EM[R{M(Oxidation (M))|F}]WV;{[DA]|[EG]}{M(Oxidation (M))|F}[WE]RMV;{[DA]|[EG]}E[HK][HS]MV;[{M(Oxidation (M))|F}T]RTTM[C(Carbamidomethyl (C))H];{[DA]|[EG]}EM[HK][HS]V;{[DA]|[EG]}{M(Oxidation (M))|F}{[ET]|[MV]}WWV 7.9059;5.3913;5.2457;4.8192;4.7017;4.6302;4.4614;4.3603;4.0579;3.6545 +;-;-;-;-;-;-;-;-;- + 253 + 1 1.508 65194.4 1.0 4080 5254 9332 HBL1_DMSO_200M_050219_1,9336 HBL1_DMSO_200M_050219_1,9336,DAEMTTRMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9337 48.887 13.0 6796100.0 25 0 1156100.0 + 15245 IPFVCNLFLH 10 47 601.8244267583193 1201.6343005834383 2 601.8242065310478 MULTI CID FTMS 0 0 0 9332 4292824.0 0.7836322396198471 -1 0.1300544738769531 5 Unmodified _IPFVCNLFLH_ REV__ENST00000395323.7_1_2:30480492-30480585:+|nuORF 1.9063754702782607 0.7178183895776981 3 {I|L}P 2 -1 10.969 0.0 0.0 0.91285 0.0 0.0 97.97718855776095 890.4977268525461 988.4749154103072 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}P 0.91285 + + 10 + 1 1.508 72224.0 1.0 4081 5254 9332 HBL1_DMSO_200M_050219_1,9337 HBL1_DMSO_200M_050219_1,9337,IPFVCNLFLH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9338 48.889 81.0 850340.0 25 0 95429.0 + 31572 RQPDSGISSI 10 96 530.2751792756749 1058.5358056181497 2 530.2751953005791 MULTI CID FTMS 0 0 0 9332 769867.875 0.1939849616955683 1 -0.0831871032714843 6 Unmodified _RQPDSGISSI_ ENSG00000163902|ENST00000296255|RPN1 57.24910588100465 0.0438022649904578 3 SG{I|L}SS{I|L} 6 4 67.568 0.0 0.0 6.3832 0.0 0.0 496.2396412580094 0.0 496.2396412580094 0.0 39.77752226111541 0.0 0.0 0 1.3494850021680094 0.0 1.2302046884880935 0.0 + SG{I|L}SS{I|L} 6.3832 + + 456 1 1.508 57624.6 1.0 4082 5254 9332 HBL1_DMSO_200M_050219_1,9338 HBL1_DMSO_200M_050219_1,9338,RQPDSGISSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9339 48.891 118.0 611580.0 25 0 98432.0 + -1 CMMQACGEDRE 11 91 693.7477388191946 1385.4809247051892 2 693.7486450076103 MULTI CID FTMS 0 0 0 9332 488333.15625 0.5613987873781795 -1 0.1300544738769531 7 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))MMQAC(Carbamidomethyl (C))GEDRE_ REV__ENSG00000151692|ENST00000320892|RNF144A 1.3295316138638542 0.8688751186870782 3 VV{M(Oxidation (M))|F}DAS 6 -1 39.826 0.0 0.0 2.8745 0.0 0.0 285.09550097647667 479.1059969537719 764.2014979302486 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 VV{M(Oxidation (M))|F}DAS 2.8745 - 248 + 1 1.508 58478.9 1.0 4083 5254 9332 HBL1_DMSO_200M_050219_1,9339 HBL1_DMSO_200M_050219_1,9339,CMMQACGEDRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9340 48.894 123.0 667360.0 25 0 76761.0 -1 CPNARCQFAFY 11 78 717.3072830646744 1432.600013196149 2 717.3072997927666 MULTI CID FTMS 0 0 0 9332 473042.53125 0.2978316867098657 -2 0.2218856811523437 8 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PNARC(Carbamidomethyl (C))QFAFY_ ENSG00000129353|ENST00000335757|SLC44A2;ENST00000589561.5_1_19:10746968-10754058:+|nuORF;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;nc|ENSG00000129353|Q8IWA5-3|SLC44A2 13.90604991867851 0.7458848613461305 3 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 87.853 0.0 0.0 6.1324 6.1324 86.585 0.0 0.0 0.0 8.061799739838875 11.382353118286233 8.061799739838875 8.061799739838875 0 0.8935078169319297 0.8239087409443188 1.031234684152075 1.274227503252014 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;[NP]HDEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQNA{M(Oxidation (M))|F}Y;[NP]HDEAQQGGA{M(Oxidation (M))|F}Y;[NP]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;[NP]HDEA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]GGA{M(Oxidation (M))|F}Y 6.1324;5.5697;5.4974;5.4974;5.4974;5.4148;4.9346;4.9346;4.9346;4.8641 -;-;-;-;-;-;-;-;-;- 2101 1 1.508 62340.5 1.0 4084 5254 9332 HBL1_DMSO_200M_050219_1,9340 HBL1_DMSO_200M_050219_1,9340,CPNARCQFAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9341 48.896 89.0 586900.0 25 0 27872.0 + 16328 IYHNPTANSF 10 89 582.2774594775573 1162.5403660219145 2 582.2781249880791 MULTI CID FTMS 0 0 0 9332 471906.84375 0.373067173055122 -1 0.1300544738769531 9 Unmodified _IYHNPTANSF_ ENSG00000125753|ENST00000245932|VASP;ENST00000586619.1_1_19:46010999-46025451:+|nuORF 22.736283301280096 0.4578556481593033 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[TA][Y{I|L}]NS{M(Oxidation (M))|F} 10 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[TA][Y{I|L}]N + + 26.454 6.8328 0.7505 2.2755 2.2755 49.096 0.0 0.0 0.0 0.0 14.771212547196626 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[TA][Y{I|L}]NS{M(Oxidation (M))|F} 2.2755 - 164 + 1 1.508 45724.5 1.0 4085 5254 9332 HBL1_DMSO_200M_050219_1,9341 HBL1_DMSO_200M_050219_1,9341,IYHNPTANSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9342 48.897 65.0 925850.0 25 0 83253.0 + 9989 FPIKTHLD 8 95 485.7716224139696 0 485.7715026736259 PEAK CID FTMS 0 0 0 9332 412037.28125 0.4405088552844186 -8 0.8089561462402344 10 Unmodified _FPIKTHLD_ REV__ENSG00000102007|ENST00000376327|PLP2;REV__nc|ENSG00000102007|Q04941-2|PLP2 28.486842064014134 0.2575685520298453 3 PPQ 3 -1 22.92 0.0 0.0 2.364 0.0 0.0 147.06815305309846 497.2845247858032 644.3526778389016 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.8494850021680094 PPQ 2.364 - 57 + 1 1.508 51201.9 1.0 4086 5254 9332 HBL1_DMSO_200M_050219_1,9342 HBL1_DMSO_200M_050219_1,9342,FPIKTHLD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9343 48.902 264.0 545510.0 25 0 50320.0 + 36201 SVVTGGVQSV 10 142 466.755594189475 931.49663544575 2 466.7563354372978 MULTI CID FTMS 0 0 0 9332 384674.71875 1.0 0 0.0 11 Unmodified _SVVTGGVQSV_ ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3 65.23502041540118 0.0228537820337083 3 [VS]QVSV 6 5 53.366 0.0 0.0 5.7291 0.0 0.0 0.0 329.1424233698313 329.1424233698313 29.58043012223392 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.4147700516499593 0.2614393726401688 [VS]QVSV 5.7291 - 3174 1 1.508 110956.7 1.0 4087 5254 9332 HBL1_DMSO_200M_050219_1,9343 HBL1_DMSO_200M_050219_1,9343,SVVTGGVQSV True True SVVTGGVQSV 48.90224 466.756335437298 2161730.75 9332.0 nc|ENSG00000105355|O60664-4|PLIN3;;nc|ENSG00000105355|O60664-3|PLIN3;;ENSG00000105355|ENST00000221957|PLIN3 6.844656626383464 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9344 48.904 77.0 536640.0 25 0 65042.0 + 5826 DPRYSDPQI 9 78 545.7618151926595 1089.5090774521188 2 545.7619506716728 MULTI CID FTMS 0 0 0 9332 338004.4375 0.5976554267737496 1 -0.0831871032714843 12 Unmodified _DPRYSDPQI_ ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7 18.1463463914782 0.3454829746528889 3 A{M(Oxidation (M))|F}D[QP]D{I|L} 7 6 27.172 0.0 0.0 2.4939 0.0 0.0 285.1686268537125 0.0 285.1686268537125 0.0 13.19221977646535 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 A{M(Oxidation (M))|F}D[QP]D{I|L} 2.4939 - 124 1 1.508 37236.4 1.0 4088 5254 9332 HBL1_DMSO_200M_050219_1,9344 HBL1_DMSO_200M_050219_1,9344,DPRYSDPQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9345 48.908 227.0 915500.0 25 0 105960.0 + 24852 IPMKIRNV 8 185 324.2003730296235 0 324.2001525759697 PEAK CID FTMS 0 0 0 9332 344156.9375 0.3023574886824136 -1 0.1300544738769531 13 Unmodified _MPLVKRNI_ ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-4|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;nc|ENSG00000006744|Q9BQ52-3|ELAC2;ENSG00000006744|ENST00000338034|ELAC2;nc|ENSG00000006744|Q9BQ52-2|ELAC2 25.399314129420983 0.3159236278339657 3 K 1 7 10.217 0.0 0.0 1.5806 0.0 0.0 117.0524652955282 398.21601282291255 515.2684781184407 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.3494850021680094 + K 1.5806 + + 31 + 1 1.508 165126.3 1.0 4089 5254 9332 HBL1_DMSO_200M_050219_1,9345 HBL1_DMSO_200M_050219_1,9345,MPLVKRNI False False IPMKIRNV 48.908275 324.20015257597 21625514.0 9332.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-3|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;nc|ENSG00000006744|Q9BQ52-2|ELAC2 5.119161287943522 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9346 48.912 170.0 888460.0 25 0 51321.0 + 22460 LPVAVKHVV 9 134 481.3134801333701 960.6124073335402 2 481.3131896853447 MULTI CID FTMS 0 0 0 9332 332504.28125 0.3943523028432509 -1 0.1300544738769531 14 Unmodified _LPVAVKHVV_ ENSG00000198355|ENST00000360612|PIM3 60.38955033654506 0.025866396858536 3 {I|L}VPAVT{I|L}G 8 6 69.914 0.0 0.0 7.2781 0.0 0.0 0.0 207.1142519586547 207.1142519586547 46.61352708167155 0.0 0.0 0.0 0 0.9517188504113844 1.3010299956639813 1.5138793319624575 0.0 {I|L}VPAVT{I|L}G 7.2781 - 1108 + 1 1.508 116022.0 1.0 4090 5254 9332 HBL1_DMSO_200M_050219_1,9346 HBL1_DMSO_200M_050219_1,9346,LPVAVKHVV True True LPVAVKHVV 48.911587 481.313189685345 5800861.5 9332.0 ENSG00000198355|ENST00000360612|PIM3 6.304818153381348 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9347 48.914 125.0 872830.0 25 0 60664.0 + 43107 VYPDERTAL 9 107 532.2751797596678 1062.5358065861355 2 532.2750732302666 MULTI CID FTMS 0 0 0 9332 288010.84375 0.5066176082568525 -1 0.1300544738769531 15 Unmodified _VYPDERTAL_ ENSG00000145391|ENST00000274031|SETD7 13.90604991867851 0.4602628045680013 3 [YV]PDP 5 5 35.177 0.0 0.0 3.3107 0.0 0.0 0.0 488.2439364068969 488.2439364068969 2.616487146114892 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 [YV]PDP 3.3107 - 166 + 1 1.508 88173.2 1.0 4091 5254 9332 HBL1_DMSO_200M_050219_1,9347 HBL1_DMSO_200M_050219_1,9347,VYPDERTAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9348 48.926 672.0 132900.0 25 0 12972.0 + + 20776 QPYYPQHPMV 10 128 637.8662835459746 1273.7180141587492 2 638.3684570193291 MULTI CID FTMS 0 0 0 9332 254575.671875 0.3330218381690813 4 -0.4100761413574219 16 Unmodified _LLVALQQHQPQ_ nc|ENSG00000101096|Q13469|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2 13.90604991867851 0.7458848613461305 3 Q 1 -1 16.479 0.0 0.0 1.2938 0.0 0.0 1127.6485083987866 0.0 1127.6485083987866 0.0 5.633345013315267 0.0 0.0 0 0.0 0.0 0.0 0.25 Q 1.2938 + + 803 + 1 1.508 69887.2 1.0 4092 5254 9332 HBL1_DMSO_200M_050219_1,9348 HBL1_DMSO_200M_050219_1,9348,LLVALQQHQPQ False False QPYYPQHPMV 48.925879 637.8675 1291321.5 9332.0 nc|ENSG00000101096|Q13469|NFATC2;;nc|ENSG00000101096|Q13469-5|NFATC2;;nc|ENSG00000101096|Q13469-4|NFATC2;;ENSG00000101096|ENST00000371564|NFATC2;;nc|ENSG00000101096|Q13469-3|NFATC2 7.23851998647054 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9349 48.929 185.0 219110.0 25 0 17713.0 + 10384 FSSKEVQSI 9 81 512.7688152828367 1023.5230776324736 2 512.7694579958916 MULTI CID FTMS 0 0 0 9332 228353.53125 0.1944138127877571 2 -0.2044792175292968 17 Unmodified _FSSKEVQSI_ ENSG00000143669|ENST00000389793|LYST;ENST00000489585.5_1_1:235926109-235996891:-|nuORF;nc|ENSG00000143669|Q99698-2|LYST 21.53697664764585 0.2571576504437394 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[DV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV 9 7 + 36.079 0.0 0.0 3.525 3.525 71.964 0.0 0.0 0.0 14.383024673460064 2.430380486862944 2.430380486862944 2.430380486862944 0 0.4247425010840047 1.6989700043360187 0.25 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[DV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[DV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}[H{I|L}][QA]Q{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}[RK][YN]{[ES]|[DT]|[{I|L}C]} 3.525;3.2875;0.37322;0.13412 -;-;-;- 171 + 1 1.508 41666.8 1.0 4093 5254 9332 HBL1_DMSO_200M_050219_1,9349 HBL1_DMSO_200M_050219_1,9349,FSSKEVQSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9350 48.942 718.0 282140.0 25 0 35725.0 + -1 LSELMTRVM 9 174 548.282644248066 1094.550735562932 2 548.2833740115166 MULTI CID FTMS 0 0 0 9332 215430.453125 0.1232243336087471 20 -1.855205535888672 18 Oxidation (M) _LSELMTRVM(Oxidation (M))_ REV__ENSG00000055163|ENST00000620254|CYFIP2;REV__ENSG00000273749|ENST00000617928|CYFIP1;REV__nc|ENSG00000055163|Q96F07|CYFIP2;REV__nc|ENSG00000273749|Q7L576-2|CYFIP1 14.838274106304384 0.4350285940865338 3 EHPPEH[HK] 8 -1 49.148 0.0 0.0 4.4903 0.0 0.0 85.08983809638828 0.0 85.08983809638828 0.0 36.82889097984422 0.0 0.0 0 2.3807196863200843 0.0 0.5242275032520141 0.0 EHPPEH[HK] 4.4903 - 2125 1 1.508 157861.7 1.0 4094 5254 9332 HBL1_DMSO_200M_050219_1,9350 HBL1_DMSO_200M_050219_1,9350,LSELMTRVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9351 48.946 227.0 549730.0 25 0 23914.0 + 31404 RPFHGISTV 9 153 507.280141107329 0 507.2804443240166 PEAK CID FTMS 0 0 0 9332 203676.921875 0.5707216746708744 -1 0.1300544738769531 19 Unmodified _RPFHGISTV_ ENSG00000137145|ENST00000434457|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C 41.8396318013385 0.053988301646488 3 S{I|L}GH{I|L}VD 7 7 34.258 0.0 0.0 3.3834 0.0 0.0 218.1275645189508 70.03061090640858 288.1581754253594 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 1.4049471895720984 0.0 S{I|L}GH{I|L}VD 3.3834 - 525 + 1 1.508 102829.3 1.0 4095 5254 9332 HBL1_DMSO_200M_050219_1,9351 HBL1_DMSO_200M_050219_1,9351,RPFHGISTV True True RPFHGISTV 48.946189 507.280444324017 1830051.5 9332.0 nc|ENSG00000137145|Q5VZ89-3|DENND4C;;ENSG00000137145|ENST00000434457|DENND4C;;nc|ENSG00000137145|Q5VZ89|DENND4C 5.792561213175456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9352 48.961 800.0 213410.0 25 0 21081.0 -1 WTWFLLCSWTR 11 88 778.3790603227214 1554.7435677122428 2 778.3774902224541 MULTI CID FTMS 0 0 0 9332 193115.578125 0.2000618635707061 -7 0.7081794738769531 20 Carbamidomethyl (C) _WTWFLLC(Carbamidomethyl (C))SWTR_ nc|ENSG00000179750|Q9UH17-2|APOBEC3B 4.5288652416199255 0.8537804541365391 3 V[PG]HAGEYGAEA{I|L}ER 15 -1 + 117.62 0.0 0.0 7.5654 7.5654 87.956 0.0 0.0 0.0 87.91283713219002 16.690067809585756 16.690067809585756 4.9168929071461775 0 4.4604093769761874 0.0 0.4247425010840047 0.0 V[PG]HAGEYGAEA{I|L}ER;V[PG]HAGEYQEA{I|L}ER;V[PG]HQEYGAEA{I|L}ER;V[PG]HQEYQEA{I|L}ER;V[PG]HAGEYG[RD]{I|L}ER;V[YQ]AWYGAEA{I|L}ER;V[PG]HA[WP]YC(Carbamidomethyl (C))A{I|L}ER;V[PG]HQEYG[RD]{I|L}ER;V[YQ]AWYQEA{I|L}ER;V[YK]AG[EP]YC(Carbamidomethyl (C))A{I|L}ER 7.5654;7.2491;6.8135;6.4987;6.3783;5.8866;5.8416;5.6278;5.5735;5.5684 -;-;-;-;-;-;-;-;-;- 6638 + 1 1.508 119656.1 0.959999978542328 4096 5254 9332 HBL1_DMSO_200M_050219_1,9352 HBL1_DMSO_200M_050219_1,9352,WTWFLLCSWTR False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 9354 48.965 7.8 7251100.0 25 0 823810.0 -1 DKIRIVKQM 9 60 573.8345247441038 1145.6544965550074 2 573.8346435427666 MULTI CID FTMS 0 0 0 9353 8260833.0 1.0 0 0.0 1 Oxidation (M) _DKIRIVKQM(Oxidation (M))_ ENST00000550479.1_1_12:104332030-104335334:+|nuORF 10.823927491677226 0.5436922275383211 3 [VP]V[KS]HVPV{[QG]|[NA]} 11 -1 + 52.412 0.0 0.0 4.5749 4.5749 54.247 0.0 0.0 0.0 13.467874862246552 7.367585652254185 7.367585652254185 0.0 0 0.5 1.0457574905606752 0.8494850021680094 0.0 [VP]V[KS]HVPV{[QG]|[NA]};[VP][KS]VHVPV{[QG]|[NA]};[VP]V[HK]SVPV{[QG]|[NA]};[VP][KS]VPVHV{[QG]|[NA]};[VP]V[KS]PVHV{[QG]|[NA]};[KS][VP]VHVPV{[QG]|[NA]};[KS][VP]VPVHV{[QG]|[NA]} 4.5749;4.5749;4.1584;3.9909;3.9909;3.3993;2.8154 -;-;-;-;-;-;- 186 1 1.497 47587.6 1.0 4097 5255 9353 HBL1_DMSO_200M_050219_1,9354 HBL1_DMSO_200M_050219_1,9354,DKIRIVKQM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9355 48.967 23.0 1818500.0 25 0 177430.0 + 3577 DAAELAQHV 9 77 477.2377440079133 952.4609350826264 2 477.2380859255791 MULTI CID FTMS 0 0 0 9353 1706118.75 0.3755793447499159 2 -0.2317390441894531 2 Unmodified _DAAELAQHV_ ENSG00000213015|ENST00000325333|ZNF580 47.74868867922204 0.0453060283459952 3 {[DA]|[EG]}AE{I|L}AQHV 9 0 + 74.887 0.0 0.0 7.8625 7.8625 94.771 0.0 0.0 0.0 57.98409776917672 9.665762445130497 9.665762445130497 13.309932190414244 0 1.3494850021680094 1.6989700043360187 0.5 0.5 + + {[DA]|[EG]}AE{I|L}AQHV;{[DA]|[EG]}AE{I|L}A[HV]Q;{[DA]|[EG]}AE{I|L}A[AG]HV 7.8625;6.465;6.3707 +;-;- + 198 + 1 1.497 39518.9 1.0 4098 5255 9353 HBL1_DMSO_200M_050219_1,9355 HBL1_DMSO_200M_050219_1,9355,DAAELAQHV True True DAAELAQHV 48.966595 477.238085925579 56064788.0 9353.0 ENSG00000213015|ENST00000325333|ZNF580 8.826176325480143 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9356 48.968 38.0 1655800.0 25 0 296690.0 + 13543 HPFFSRQKI 9 81 387.2172038706192 1158.6297822120578 3 387.2170593142509 MULTI CID FTMS 0 0 0 9353 1503532.375 1.0 0 0.0 3 Unmodified _HPFFSRQKI_ ENST00000558506.1_1_14:103801937-103802258:+|nuORF;ENST00000560763.5_2_14:103800597-103802258:+|nuORF 29.43715596616401 0.1566398223704148 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}PH{I|L} 9 7 + 47.374 0.0 0.0 4.0888 4.0888 77.46 0.0 0.0 0.0 2.8554434910878257 17.664252385751098 2.8554434910878257 5.262940478034892 0 0.2302046884880938 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}PH{I|L};{I|L}HM{M(Oxidation (M))|F}KD[KQ]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[RV]{M(Oxidation (M))|F}PH{I|L};H{I|L}M{M(Oxidation (M))|F}KD[KQ]{I|L};HP{M(Oxidation (M))|F}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[RV]{I|L};{I|L}HM{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[RV]{I|L};HP{I|L}{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}[RV]{I|L};H{I|L}M{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[RV]{I|L};{I|L}HP{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}[RV]{I|L};H{I|L}P{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}[RV]{I|L} 4.0888;3.6345;3.525;3.355;3.2463;2.9645;2.9375;2.6849;2.6556;2.376 -;-;-;-;-;-;-;-;-;- 191 1 1.497 56805.1 1.0 4099 5255 9353 HBL1_DMSO_200M_050219_1,9356 HBL1_DMSO_200M_050219_1,9356,HPFFSRQKI False True HPFFSRQKI 48.967774 387.217059314251 8818309.0 9353.0 ENST00000560763.5_2_14:103800597-103802258:+|nuORF;;ENST00000558506.1_1_14:103801937-103802258:+|nuORF 2.097694741562009 3.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9357 48.969 44.0 696830.0 25 0 35669.0 + 18241 KVIDPATATSV 11 70 551.3115120015167 1100.6084710698333 2 551.3119384646416 MULTI CID FTMS 0 0 0 9353 1232596.375 0.363678854340378 2 -0.2317390441894531 4 Unmodified _KVIDPATATSV_ ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4 26.020703789607367 0.4812285719068541 3 [VS][R{I|L}][PA]TATW 10 4 + 34.665 0.0 0.0 3.1496 3.1496 82.888 0.0 0.0 0.0 6.249165798569969 16.878491631832695 6.249165798569969 34.66508858175391 0 0.6677353201839438 0.958607314841775 0.9247425010840048 0.0 [VS][R{I|L}][PA]TATW 3.1496 - 65 1 1.497 33413.4 1.0 4100 5255 9353 HBL1_DMSO_200M_050219_1,9357 HBL1_DMSO_200M_050219_1,9357,KVIDPATATSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9358 48.97 44.0 1675600.0 25 0 149760.0 + 39187 TYQKLARAL 9 73 532.3160750745161 1062.617597215832 2 532.3161498904228 MULTI CID FTMS 0 0 0 9353 1189468.125 0.3833709328394769 -1 0.0831871032714843 5 Unmodified _TYQKLARAL_ ENSG00000269404|ENST00000595883|SPIB;nc|ENSG00000269404|Q01892-3|SPIB 45.69961567697781 0.0497987121815769 3 TYQK{I|L}A 6 3 71.252 0.0 0.0 6.7053 0.0 0.0 0.0 355.21039758853755 355.21039758853755 43.71711600377081 0.0 0.0 0.0 0 1.0189301784845295 2.0 0.0 0.3807196863200844 + TYQK{I|L}A 6.7053 + + 118 + 1 1.497 63196.7 1.0 4101 5255 9353 HBL1_DMSO_200M_050219_1,9358 HBL1_DMSO_200M_050219_1,9358,TYQKLARAL True True TYQKLARAL 48.970245 532.316149890423 66898464.0 9353.0 ENSG00000269404|ENST00000595883|SPIB;;nc|ENSG00000269404|Q01892-3|SPIB 5.964770476023356 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9359 48.972 57.0 1212600.0 25 0 147400.0 + 3997 DALRPSVV 8 83 428.74806273103775 855.4815725288755 2 428.7479125857353 MULTI CID FTMS 0 0 0 9353 907435.75 0.1374898797632158 2 -0.2317390441894531 6 Unmodified _DALRPSVV_ ENSG00000089154|ENST00000300648|GCN1 39.94969957227396 0.2351327405675156 3 {[DA]|[EG]}{I|L}R[PS]VV 8 0 + 45.864 0.0 0.0 5.3611 5.3611 87.879 0.0 0.0 0.0 0.7082530717588753 0.7082530717588753 0.7082530717588753 15.228787452803374 0 1.6989700043360187 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}{I|L}R[PS]VV;W{I|L}[VG][PS]VV 5.3611;3.581 +;- + 40 + 1 1.497 63122.5 1.0 4102 5255 9353 HBL1_DMSO_200M_050219_1,9359 HBL1_DMSO_200M_050219_1,9359,DALRPSVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9360 48.974 82.0 480580.0 25 0 67746.0 + -1 VSIDFRCED 9 75 570.7546468581762 1139.4947407831523 2 570.7547485232353 MULTI CID FTMS 0 0 0 9353 620798.875 0.1833423311423077 2 -0.2317390441894531 7 Carbamidomethyl (C) _VSIDFRC(Carbamidomethyl (C))ED_ REV__ENSG00000113163|ENST00000643780|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-2|CERT1;REV__nc|ENSG00000113163|Q9Y5P4-3|CERT1 13.90604991867851 0.4602628045680013 3 [VS]{I|L} 3 -1 35.942 0.0 0.0 3.1542 0.0 0.0 0.0 837.2862196252023 837.2862196252023 27.98332479720628 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 [VS]{I|L} 3.1542 + + 53 1 1.497 36160.2 1.0 4103 5255 9353 HBL1_DMSO_200M_050219_1,9360 HBL1_DMSO_200M_050219_1,9360,VSIDFRCED False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9361 48.976 132.0 467130.0 25 0 65922.0 -1 FQACNEFSEC 10 96 617.7301841649428 1233.4458153966857 2 617.7310668826103 MULTI CID FTMS 0 0 0 9353 606537.5625 0.4683652026205591 2 -0.2317390441894531 8 Carbamidomethyl (C) _FQAC(Carbamidomethyl (C))NEFSEC_ ENSG00000081148|ENST00000193391|IMPG2 3.944395688203298 0.708391353636983 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 3 -1 17.821 0.0 0.0 1.4448 0.0 0.0 0.0 827.2365923344386 827.2365923344386 5.602802969692753 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 0.3807196863200844 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 1.4448 - 474 1 1.497 49501.6 1.0 4104 5255 9353 HBL1_DMSO_200M_050219_1,9361 HBL1_DMSO_200M_050219_1,9361,FQACNEFSEC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9362 48.979 116.0 847530.0 25 0 52098.0 + 3652 DAEMTTRMV 9 131 535.236357544641 0 535.2358276247978 PEAK CID FTMS 0 0 0 9353 453070.1875 0.5486916813046303 -1 0.0831871032714843 9 Oxidation (M) _DAEM(Oxidation (M))TTRMV_ ENSG00000205220|ENST00000358514|PSMB10 53.832793166522166 0.0232989711577274 3 E{M(Oxidation (M))|F}TTR 5 4 35.662 0.0 0.0 3.3377 0.0 0.0 186.05821206018192 245.0971621149047 431.15537417508665 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.0356668758921828 0.0 + E{M(Oxidation (M))|F}TTR 3.3377 + + 414 + 1 1.497 78646.7 1.0 4105 5255 9353 HBL1_DMSO_200M_050219_1,9362 HBL1_DMSO_200M_050219_1,9362,DAEMTTRMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9363 48.98 69.0 662290.0 25 0 55034.0 + 22410 LPTEPERR 8 95 499.274702651945 996.53485237069 2 499.2741271853447 MULTI CID FTMS 0 0 0 9353 403678.46875 0.7472339346894369 7 -0.7561225891113281 10 Unmodified _LPTEPERR_ REV__ENSG00000114270|ENST00000681320|COL7A1;REV__nc|ENSG00000114270|Q02388-2|COL7A1 5.760428011301431 0.7893668129297577 3 [{I|L}P]DA 4 -1 20.177 0.0 0.0 2.0247 0.0 0.0 0.0 597.3132696893025 597.3132696893025 14.23516269895728 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [{I|L}P]DA 2.0247 - 47 1 1.497 41894.6 1.0 4106 5255 9353 HBL1_DMSO_200M_050219_1,9363 HBL1_DMSO_200M_050219_1,9363,LPTEPERR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9364 48.986 295.0 350830.0 25 0 46770.0 + 43712 YCAEIAHNV 9 134 510.2343215099534 1018.4540900867069 2 510.2341186404228 MULTI CID FTMS 0 0 0 9353 324372.875 0.2837811710232921 2 -0.2317390441894531 11 Unmodified _YCAEIAHNV_ ENSG00000144713|ENST00000429711|RPL32;ENST00000458542.1_1_3:25791186-25791384:+|nuORF 39.94969957227396 0.0757326808254658 3 YCAE{I|L}AHNV 9 0 + 78.573 0.0 0.0 7.7149 7.7149 94.546 0.0 0.0 0.0 67.46375355505528 14.468261625874987 14.468261625874987 13.526909627198409 0 0.805462187404089 2.0 0.0 0.8737125054200234 + + YCAE{I|L}AHNV;YC{[QN]|[E{I|L}]|[KN]}AAHNV;YCAE{I|L}AHGGV;YCA[TA]{[MG]|[TS]}{M(Oxidation (M))|F}R;YCAE{I|L}[HQ]GV;YC{[QN]|[E{I|L}]|[KN]}AAHGGV;YCA{[MG]|[TS]}[TA]{M(Oxidation (M))|F}R;YCA{[MG]|[TS]}[YR]R;YC{[QN]|[E{I|L}]|[KN]}V[HQ]Q;YC{[QN]|[E{I|L}]|[KN]}A[HQ]GV 7.7149;6.3867;5.9703;5.4873;5.2601;5.0592;4.4786;4.4337;4.1376;3.9319 +;-;-;-;-;-;-;-;-;- + 1040 + 1 1.497 82295.3 1.0 4107 5255 9353 HBL1_DMSO_200M_050219_1,9364 HBL1_DMSO_200M_050219_1,9364,YCAEIAHNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9365 48.99 252.0 442900.0 25 0 23733.0 + -1 AQIDHEYAC 9 144 553.731011081464 1105.447469229728 2 553.7318603396416 MULTI CID FTMS 0 0 0 9353 265120.15625 1.0 0 0.0 12 Carbamidomethyl (C) _AQIDHEYAC(Carbamidomethyl (C))_ REV__ENSG00000173898|ENST00000533211|SPTBN2;REV__nc|ENSG00000173898|O15020-2|SPTBN2 28.486842064014134 0.1687311288560894 3 {[RE]|[WV]}APVQC(Carbamidomethyl (C))[C(Carbamidomethyl (C))S] 9 -1 + 29.732 0.0 0.0 2.6896 2.6896 68.717 0.0 0.0 0.0 1.4470922845602807 1.249387366082999 1.249387366082999 1.4470922845602807 0 0.0 0.0 0.0 0.8639829889124311 {[RE]|[WV]}APVQC(Carbamidomethyl (C))[C(Carbamidomethyl (C))S];[QA][QP]KQC(Carbamidomethyl (C))[C(Carbamidomethyl (C))S];{NN|[MP]|[D{I|L}]|[EV]}KPVQC(Carbamidomethyl (C))[C(Carbamidomethyl (C))S];{NN|[MP]|[D{I|L}]|[EV]}PKVQC(Carbamidomethyl (C))[C(Carbamidomethyl (C))S];[QA]YYSD{I|L}[C(Carbamidomethyl (C))S];{[RE]|[WV]}AY{M(Oxidation (M))|F}SS[C(Carbamidomethyl (C))S];[QA]YY{I|L}DS[C(Carbamidomethyl (C))S];[PG]HD{M(Oxidation (M))|F}{I|L}SS[C(Carbamidomethyl (C))S];[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VQC(Carbamidomethyl (C))[C(Carbamidomethyl (C))S];[QA][QP]{[MG]|[TS]}D{I|L}[C(Carbamidomethyl (C))S] 2.6896;2.5587;2.4262;2.4008;2.3775;2.2058;2.1768;2.0167;1.9944;1.9761 -;-;-;-;-;-;-;-;-;- 1510 1 1.497 87420.5 1.0 4108 5255 9353 HBL1_DMSO_200M_050219_1,9365 HBL1_DMSO_200M_050219_1,9365,AQIDHEYAC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9366 48.997 383.0 524070.0 25 0 51046.0 -1 0 193 336.72370527909567 671.4328576249914 2 336.7233154177666 MULTI CID FTMS 0 0 0 9353 217766.0 0.7620758216291804 -1 0.0831871032714843 13 3 A{I|L}VRT{I|L} 6 -1 + 61.589 0.0 0.0 9.1728 9.1728 98.417 0.0 0.0 0.0 52.0560957502116 7.326805368589596 7.326805368589596 38.01512186938416 0 0.4247425010840047 2.0 0.4247425010840047 0.2302046884880938 A{I|L}VRT{I|L};[{I|L}A]{I|L}T[RV] 9.1728;3.511 -;- 87 + 1 1.497 162622.5 1.0 4109 5255 9353 HBL1_DMSO_200M_050219_1,9366 HBL1_DMSO_200M_050219_1,9366, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9367 49.009 699.0 249250.0 25 0 14735.0 + 8568 ETLRPTEAVIH 11 152 633.3456651515121 0 633.3460571169853 PEAK CID FTMS 0 0 0 9353 200219.296875 1.0 0 0.0 14 Unmodified _ETLRPTEAVIH_ REV__ENSG00000177679|ENST00000611745|SRRM3;REV__nc|ENSG00000177679|A6NNA2|SRRM3 16.149105407346934 0.3934762919021404 3 {M(Oxidation (M))|F}[DP]{I|L}TAD 7 -1 35.322 0.0 0.0 2.793 0.0 0.0 291.2244591098616 211.1091707818969 502.3336298917585 0.0 0.0 0.0 0.0 0 0.0 0.0 2.1861818737241734 0.0 {M(Oxidation (M))|F}[DP]{I|L}TAD 2.793 - 1132 + 1 1.497 131359.9 1.0 4110 5255 9353 HBL1_DMSO_200M_050219_1,9367 HBL1_DMSO_200M_050219_1,9367,ETLRPTEAVIH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9368 49.023 800.0 485510.0 25 0 62207.0 + -1 QLAEDLKKV 9 319 348.20167195902707 347.1943954924271 1 348.2016174197197 MULTI CID FTMS 0 0 0 9353 180673.234375 0.2682608568154356 9 -0.9652976989746094 15 ENSG00000198836|ENST00000361510|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313|OPA1;nc|ENSG00000198836|O60313-11|OPA1 3 V 1 -1 9.6777 0.0 0.0 2.7874 0.0 0.0 230.1148113022888 0.0 230.1148113022888 0.0 1.5422700687159416 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.7874 - 58 + 1 1.497 308724.1 0.7699999809265137 4111 5255 9353 HBL1_DMSO_200M_050219_1,9368 HBL1_DMSO_200M_050219_1,9368, False False QLAEDLKKV 49.023264 348.20161741972 761925.5625 9353.0 ENSG00000198836|ENST00000361510|OPA1;;nc|ENSG00000198836|O60313-9|OPA1;;nc|ENSG00000198836|O60313-2|OPA1;;nc|ENSG00000198836|O60313-13|OPA1;;nc|ENSG00000198836|O60313|OPA1;;nc|ENSG00000198836|O60313-11|OPA1 4.4431867599487305 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9369 49.026 121.0 803250.0 25 0 72577.0 -1 FFWCACCL 8 103 546.2118761512891 1090.409199369378 2 546.2116577029228 MULTI CID FTMS 0 0 0 9353 168518.984375 0.2218260604082127 -1 0.0831871032714843 16 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))FFWCAC(Carbamidomethyl (C))CL_ ENSG00000123843|ENST00000367078|C4BPB;ENST00000492730.1_1_1:207262876-207265203:+|nuORF;nc|ENSG00000123843|P20851-2|C4BPB 6.354104778181461 0.7857632046190106 3 {I|L} 1 -1 11.594 0.0 0.0 1.0633 0.0 0.0 959.3142266904704 0.0 959.3142266904704 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0633 + + 27 + 1 1.497 77887.4 1.0 4112 5255 9353 HBL1_DMSO_200M_050219_1,9369 HBL1_DMSO_200M_050219_1,9369,FFWCACCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9370 49.04 800.0 204360.0 25 0 22046.0 + 33612 YPTEGISHV 9 195 501.2775570085982 0 501.7480956912041 PEAK CID FTMS 0 0 0 9353 31769.09375 0.9748495423130444 1 -0.1212921142578125 17 Unmodified _SIPTTTSVPV_ ENSG00000130695|ENST00000451429|CEP85;nc|ENSG00000130695|Q6P2H3|CEP85;nc|ENSG00000130695|Q6P2H3-4|CEP85 19.256988751693697 0.3042552096208299 3 PTE 3 8 15.367 0.0 0.0 1.5358 0.0 0.0 162.12134283726795 508.25361047916255 670.3749533164305 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.0 PTE 1.5358 - 617 + 1 1.497 125865.5 0.9700000286102296 4113 5255 9353 HBL1_DMSO_200M_050219_1,9370 HBL1_DMSO_200M_050219_1,9370,SIPTTTSVPV False False YPTEGISHV 49.039589 501.748095691204 1448509.5 9353.0 ENSG00000130695|ENST00000451429|CEP85;;nc|ENSG00000130695|Q6P2H3|CEP85;;nc|ENSG00000130695|Q6P2H3-4|CEP85 6.38242785135905 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9371 49.055 800.0 254510.0 25 0 15527.0 32842 SEGSTKAWDT 10 228 361.1638083751093 1080.4695957255278 3 361.1634399294853 MULTI CID FTMS 0 0 0 9353 150232.265625 0.3580110747803479 -1 0.0831871032714843 18 Unmodified _SEGSTKAWDT_ ENSG00000150457|ENST00000382592|LATS2 5.783430956126388 0.6998847395148697 3 {[QG]|[NA]}[Y{M(Oxidation (M))|F}]{I|L}AD[HM] 9 8 + 31.956 0.0 0.0 2.9576 2.9576 81.836 0.0 0.0 0.0 9.737642641499914 22.278420083798068 9.737642641499914 21.123574476362734 0 0.0 1.3979400086720375 0.0 0.0283773187068795 {[QG]|[NA]}[Y{M(Oxidation (M))|F}]{I|L}AD[HM];[AG]G[Y{M(Oxidation (M))|F}]{I|L}AD[HM];{[MS]|[{M(Oxidation (M))|F}A]}R{M(Oxidation (M))|F}SW[HM];{[MS]|[{M(Oxidation (M))|F}A]}[VG]{M(Oxidation (M))|F}SAD[HM];[HA]DD[K{I|L}]D[HM] 2.9576;1.0026;0.50438;0.25172;0.17843 -;-;-;-;- 390 1 1.497 167253.3 0.8199999928474426 4114 5255 9353 HBL1_DMSO_200M_050219_1,9371 HBL1_DMSO_200M_050219_1,9371,SEGSTKAWDT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9372 49.069 800.0 318490.0 25 0 40161.0 + -1 SIYNGDMEKI 10 172 593.2769376604247 1184.5393223876492 2 593.2770873904228 MULTI CID FTMS 0 0 0 9353 147656.3125 0.905505596261768 -2 0.2132415771484375 19 Oxidation (M) _SIYNGDM(Oxidation (M))EKI_ ENST00000550043.1_1_14:28733783-28734191:+|nuORF;ENSG00000176171|ENST00000368636|BNIP3 34.93206674587334 0.2110832994570416 3 {[TV]|[{I|L}S]}YNDG 6 -1 62.58 0.0 0.0 5.2831 0.0 0.0 0.0 532.2450655572874 532.2450655572874 36.843538523571496 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.3054621874040891 0.6747425010840047 {[TV]|[{I|L}S]}YNDG 5.2831 - 1346 + 1 1.497 188001.0 1.0 4115 5255 9353 HBL1_DMSO_200M_050219_1,9372 HBL1_DMSO_200M_050219_1,9372,SIYNGDMEKI False False SIYNGDMEKI 49.068699 593.277087390423 1795481.75 9353.0 ENST00000550043.1_1_14:28733783-28734191:+|nuORF;;ENSG00000176171|ENST00000368636|BNIP3 2.3986294666926065 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9373 49.083 800.0 463590.0 25 0 34754.0 + 7499 EGYLQKAKI 9 277 350.5378956267017 1048.5918574803052 3 350.5370056033134 MULTI CID FTMS 0 0 0 9353 144667.015625 0.8089903436913323 -1 0.0831871032714843 20 Unmodified _EGYLQKAKI_ ENSG00000075884|ENST00000295095|ARHGAP15;ENST00000552641.5_1_2:143913059-144194625:+|nuORF 43.85829265575387 0.0542763391141878 3 EGY{I|L}{I|L}[RV]S{I|L} 9 4 + 62.139 0.0 0.0 5.9259 5.9259 80.525 0.0 0.0 0.0 17.904849854573683 10.182248201061988 10.182248201061988 3.0102999566398125 0 0.0189301784845295 0.1426675035687315 0.8646051890133548 1.3494850021680094 EGY{I|L}{I|L}[RV]S{I|L};EG{I|L}Y{I|L}[RV]S{I|L};EGY{I|L}QKAK{I|L};EGY{I|L}{I|L}[RV]TV;EG{I|L}YQKAK{I|L};EG{I|L}Y{I|L}[RV]TV;EGY{I|L}QKA{I|L}K;EGY{I|L}[AG]KAK{I|L};EG{I|L}YQKA{I|L}K;EG{I|L}Y[AG]KAK{I|L} 5.9259;5.6388;5.2076;4.9549;4.9205;4.6678;4.3901;4.3295;4.103;4.0424 -;-;+;-;-;-;-;-;-;- + 342 + 1 1.497 293379.2 0.7900000214576721 4116 5255 9353 HBL1_DMSO_200M_050219_1,9373 HBL1_DMSO_200M_050219_1,9373,EGYLQKAKI True True EGYLQKAKI 49.082514 350.537005603313 2016329.125 9353.0 ENSG00000075884|ENST00000295095|ARHGAP15;;ENST00000552641.5_1_2:143913059-144194625:+|nuORF 3.73365585009257 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9375 49.087 1.2 36290000.0 25 0 4350300.0 + 41513 VPNNKITVV 9 73 492.2978879307647 982.5812229283296 2 492.2981445193291 MULTI CID FTMS 0 0 0 9374 52623168.0 1.0 0 0.0 1 Unmodified _VPNNKITVV_ ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 47.74868867922204 0.0453060283459952 3 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 7 3 38.037 0.0 0.0 3.8712 0.0 0.0 0.0 213.1227973561511 213.1227973561511 18.467422566383004 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.7614393726401688 0.0 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 3.8712 - 148 1 1.479 41587.5 1.0 4117 5256 9374 HBL1_DMSO_200M_050219_1,9375 HBL1_DMSO_200M_050219_1,9375,VPNNKITVV True True VPNNKITVV 49.086707 492.298144519329 2847546880.0 9374.0 ENSG00000111716|ENST00000350669|LDHB;;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 9.419728914896648 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9376 49.088 38.0 2020600.0 25 0 98481.0 + 30117 QVISQAAVVHA 11 128 561.8167316392003 1121.6189103452004 2 561.8168823122978 MULTI CID FTMS 0 0 0 9374 962119.125 0.2088507510912566 2 -0.205596923828125 2 Unmodified _QVISQAAVVHA_ ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1;nc|ENSG00000176623|Q96DB5-3|RMDN1 66.45667989310934 0.0429411148994294 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SQAAVV[HA] 11 0 + 76.446 0.0 0.0 6.8157 6.8157 91.94 0.0 0.0 0.0 55.08533606100879 7.367585652254178 7.367585652254178 12.381073231970944 0 1.024227503252014 1.6989700043360187 0.0 0.3252574989159953 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SQAAVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S[AG]AAVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SQ[Q{I|L}]V[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[TA]NAVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S[AG][Q{I|L}]V[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[TA]GGAVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}[KS][PS]AVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}HTHK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QV]|[N{I|L}]|[RA]|[KV]}[KS]A[PS]VV[HA];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VV[PS]AVV[HA] 6.8157;5.7118;5.0944;4.6753;4.2773;3.8615;2.9604;2.9537;2.8034;1.8436 +;-;-;-;-;-;-;-;-;- + 977 + 1 1.479 60871.3 1.0 4118 5256 9374 HBL1_DMSO_200M_050219_1,9376 HBL1_DMSO_200M_050219_1,9376,QVISQAAVVHA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9377 49.089 16.0 3271200.0 25 0 360880.0 + 35002 SQPDKLQTL 9 77 515.2825258186245 1028.550498704049 2 515.2828246951103 MULTI CID FTMS 0 0 0 9374 3525086.0 1.0 0 0.0 3 Unmodified _SQPDKLQTL_ ENSG00000085840|ENST00000371568|ORC1 34.40172386719151 0.1061884637610825 3 {[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}QT{I|L}{[QS]|[NT]} 9 5 + 45.78 0.0 0.0 4.4509 4.4509 79.049 0.0 0.0 0.0 5.924325916815924 5.642492736872597 5.642492736872597 5.924325916815924 0 0.0 0.0 1.110924374808178 0.4247425010840047 {[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}QT{I|L}{[QS]|[NT]};[DP]K{I|L}QT{I|L}{[QS]|[NT]};{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}[AG]T{I|L}{[QS]|[NT]};[DP]K{I|L}[AG]T{I|L}{[QS]|[NT]};{[QD]|[EN]|[WG]|[KD]|[RS]}P[WR]{I|L}{[QS]|[NT]};{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}[WR]{[QS]|[NT]} 4.4509;3.8749;3.5556;2.9796;1.4648;1.4648 -;-;-;-;-;- 151 1 1.479 44606.0 1.0 4119 5256 9374 HBL1_DMSO_200M_050219_1,9377 HBL1_DMSO_200M_050219_1,9377,SQPDKLQTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9378 49.09 38.0 1537000.0 25 0 177880.0 + 35259 SSFIGKVKS 9 86 476.7767737019838 951.5389944707676 2 476.7766906619072 MULTI CID FTMS 0 0 0 9374 1678362.375 0.855982191968408 -1 0.1212921142578125 4 Unmodified _SSFIGKVKS_ REV__ENST00000335500.8_1_17:42474164-42474308:-|nuORF 29.081581746732265 0.1611639662936252 3 {[CA]|SS}{M(Oxidation (M))|F}{I|L}SKVGK 9 -1 + 51.346 0.0 0.0 5.3961 5.3961 89.932 0.0 0.0 0.0 35.86162586626121 11.732365565233607 11.732365565233607 51.34617593130149 0 0.7302046884880937 0.0 0.7742275032520141 0.1643943297944484 {[CA]|SS}{M(Oxidation (M))|F}{I|L}SKVGK 5.3961 - 122 + 1 1.479 52459.4 1.0 4120 5256 9374 HBL1_DMSO_200M_050219_1,9378 HBL1_DMSO_200M_050219_1,9378,SSFIGKVKS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9379 49.091 26.0 2084800.0 25 0 398740.0 -1 LPMNWWIVK 9 47 401.5517172917056 1201.6333224753168 3 401.5517150759697 MULTI CID FTMS 0 0 0 9374 1631760.75 0.535089182719168 1 -0.1104469299316406 5 Oxidation (M) _LPM(Oxidation (M))NWWIVK_ ENSG00000107104|ENST00000382297|KANK1;ENST00000354485.5_1_9:676972-730286:+|nuORF;ENST00000489369.5_1_9:676972-732786:+|nuORF;nc|ENSG00000107104|Q14678-2|KANK1 4.897010918128616 0.7437319958283661 3 P 1 -1 6.9897 0.0 0.0 0.58168 0.0 0.0 559.242811437906 542.3104342096311 1101.553245647537 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.58168 + + 8 + 1 1.479 46314.9 1.0 4121 5256 9374 HBL1_DMSO_200M_050219_1,9379 HBL1_DMSO_200M_050219_1,9379,LPMNWWIVK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9380 49.093 41.0 1368200.0 25 0 206170.0 2241 AQEYADFMERY 11 72 711.8019095013437 1421.5892660694874 2 711.8011962771416 MULTI CID FTMS 0 0 0 9374 1380055.375 0.8395362995150656 -1 0.1212921142578125 6 Unmodified _AQEYADFMERY_ ENSG00000198797|ENST00000361539|BRINP2 7.608950283845883 0.8392484121837455 3 {[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y 13 10 + 89.723 0.0 0.0 6.3114 6.3114 81.36 0.0 0.0 0.0 2.999354466878401 11.448658907276368 2.999354466878401 2.999354466878401 0 0.8935078169319297 0.7695510786217261 0.6747425010840047 1.6549471895720984 {[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQDAGA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQWGA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQDAGA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQDQA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQ[AG]DA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQDAGA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQWGA{M(Oxidation (M))|F}Y 6.3114;6.1004;6.0473;5.9343;5.8009;5.7215;5.677;5.6732;5.6684;5.5899 -;-;-;-;-;-;-;-;-;- 3772 1 1.479 43264.8 1.0 4122 5256 9374 HBL1_DMSO_200M_050219_1,9380 HBL1_DMSO_200M_050219_1,9380,AQEYADFMERY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9381 49.094 61.0 608720.0 25 0 29951.0 + -1 EYEDMFCP 8 83 553.6946278685846 1105.374702803969 2 553.6949951052666 MULTI CID FTMS 0 0 0 9374 1006169.5 1.0 0 0.0 7 Carbamidomethyl (C),Oxidation (M) _EYEDM(Oxidation (M))FC(Carbamidomethyl (C))P_ REV__ENSG00000103351|ENST00000576634|CLUAP1;REV__ENST00000572632.1_1_16:3569992-3580585:+|nuORF;REV__nc|ENSG00000103351|Q96AJ1-2|CLUAP1 0.6903765706972694 0.8201419426409876 3 {M(Oxidation (M))|F} 1 -1 12.218 0.0 0.0 1.1054 0.0 0.0 940.3312743145144 0.0 940.3312743145144 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1054 + + 53 + 1 1.479 33035.4 1.0 4123 5256 9374 HBL1_DMSO_200M_050219_1,9381 HBL1_DMSO_200M_050219_1,9381,EYEDMFCP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9382 49.096 103.0 1076400.0 25 0 201650.0 -1 0 72 966.4326234561798 1930.85069397916 2 966.9352294802666 MULTI CID FTMS 0 0 0 9374 1015173.75 0.5912602090504261 -6 0.6516189575195312 8 3 {I|L}TNQP{[QN]|[E{I|L}]|[KN]} 7 -1 19.635 0.0 0.0 1.0169 0.0 0.0 1117.4266460567194 0.0 1117.4266460567194 0.0 -0.5152852941307273 -0.5152852941307273 0.0 0 0.0 0.0 0.2302046884880938 0.0 {I|L}TNQP{[QN]|[E{I|L}]|[KN]} 1.0169 - 235 + 1 1.479 81176.7 1.0 4124 5256 9374 HBL1_DMSO_200M_050219_1,9382 HBL1_DMSO_200M_050219_1,9382, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9383 49.098 78.0 971120.0 25 0 48049.0 -1 DAGTSGGQQCP 11 76 539.2169703242071 1076.419387715214 2 539.2169067263603 MULTI CID FTMS 0 0 0 9374 971502.75 0.9009311256796522 -1 0.1212921142578125 9 Carbamidomethyl (C) _DAGTSGGQQC(Carbamidomethyl (C))P_ ENST00000372014.4_1_6:44081832-44095144:-|nuORF 2.498486711656943 0.8633599123570009 3 WEM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[ET]|[MV]} 7 -1 19.965 0.0 0.0 1.8548 0.0 0.0 88.04681014006185 0.0 88.04681014006185 0.0 8.728269624704694 0.0 0.0 0 0.0 0.0 1.0 0.0 WEM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[ET]|[MV]} 1.8548 - 143 + 1 1.479 62149.5 1.0 4125 5256 9374 HBL1_DMSO_200M_050219_1,9383 HBL1_DMSO_200M_050219_1,9383,DAGTSGGQQCP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9384 49.1 74.0 631040.0 25 0 34750.0 + 20109 KLIQESPTV 9 94 507.7953001153971 1013.5760472975942 2 507.7962829470634 MULTI CID FTMS 0 0 0 9374 528307.0 1.0 0 0.0 10 Unmodified _LKESQLPTV_ nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-2|CEP57;ENSG00000166037|ENST00000325542|CEP57 37.97399986684836 0.0865783450051559 3 {[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}{I|L}{I|L}SPTV 10 4 + 40.551 0.0 0.0 4.0008 4.0008 82.296 0.0 0.0 0.0 7.359304977541363 13.521825181113623 7.359304977541363 10.220296124331355 0 0.8182503180159344 1.0 0.3494850021680094 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}{I|L}{I|L}SPTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VRRGHGV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}K{[VA]|[{I|L}G]}GHGV;{[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}{I|L}{I|L}{[RE]|[WV]}V;{[DS]|[MA]|[CV]|TT}{I|L}[Q{I|L}]AAPTV;[TP]{I|L}H[H{I|L}]{I|L}[PS];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VRR[HN]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}K{[VA]|[{I|L}G]}[HN]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}KHGV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[Q{I|L}]KHGV 4.0008;2.9925;2.9473;2.7454;2.6542;2.4082;2.378;2.3275;2.3029;2.3029 -;-;-;-;-;-;-;-;-;- 203 + 1 1.479 44290.4 1.0 4126 5256 9374 HBL1_DMSO_200M_050219_1,9384 HBL1_DMSO_200M_050219_1,9384,LKESQLPTV True True KLIQESPTV 49.099874 507.796282947063 3409329.75 9374.0 nc|ENSG00000166037|Q86XR8-4|CEP57;;nc|ENSG00000166037|Q86XR8-5|CEP57;;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;;nc|ENSG00000166037|Q86XR8-2|CEP57;;ENSG00000166037|ENST00000325542|CEP57 5.096625010172526 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9385 49.102 106.0 766110.0 25 0 66987.0 28245 PQRMIQTKV 9 115 367.5454388381011 1099.6144871145034 3 367.5444824099541 MULTI CID FTMS 0 0 0 9374 332314.15625 1.0 0 0.0 11 Unmodified _PQRMIQTKV_ ENSG00000080298|ENST00000617270|RFX3;nc|ENSG00000080298|P48380-2|RFX3 12.240655878213236 0.5053430591993562 3 [TA]D[RH]YD 7 9 23.726 0.0 0.0 2.1576 0.0 0.0 0.0 238.2274991596784 238.2274991596784 2.756593928413487 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4896518287104437 0.0 [TA]D[RH]YD 2.1576 - 178 1 1.479 73717.8 1.0 4127 5256 9374 HBL1_DMSO_200M_050219_1,9385 HBL1_DMSO_200M_050219_1,9385,PQRMIQTKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9386 49.107 256.0 421850.0 25 0 39831.0 22740 LQKMMVVAL 9 109 344.86979806824434 1031.587564804933 3 344.8694946169853 MULTI CID FTMS 0 0 0 9374 320975.5 0.2167186561067336 1 -0.1104469299316406 12 Unmodified _LQKMMVVAL_ ENSG00000137414|ENST00000259963|FAM8A1 11.494710602746466 0.5255349189887087 3 VA{I|L} 3 6 26.911 0.0 0.0 2.6087 0.0 0.0 730.3878471887839 0.0 730.3878471887839 0.0 15.94212497064703 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + VA{I|L} 2.6087 + + 53 1 1.479 90770.0 1.0 4128 5256 9374 HBL1_DMSO_200M_050219_1,9386 HBL1_DMSO_200M_050219_1,9386,LQKMMVVAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9387 49.117 556.0 251390.0 25 0 18385.0 + 16379 IYQESVGSY 9 172 523.2459620415623 1044.4773711499245 2 523.2463867068291 MULTI CID FTMS 0 0 0 9374 326761.125 0.3053096492433916 1 -0.1104469299316406 13 Unmodified _IYQESVGSY_ ENSG00000204267|ENST00000374897|TAP2;nc|ENSG00000204267|Q03519-2|TAP2 46.020951573049366 0.0490941689151868 3 [Y{I|L}]QESVGSY 9 0 [Y{I|L}]QESV + + 25.802 26.176 3.6388 2.4703 2.4703 49.337 0.0 0.0 0.0 0.0 4.529774511733002 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.0 + + [Y{I|L}]QESVGSY 2.4703 + + 965 + 1 1.479 113622.1 1.0 4129 5256 9374 HBL1_DMSO_200M_050219_1,9387 HBL1_DMSO_200M_050219_1,9387,IYQESVGSY True True IYQESVGSY 49.116624 523.246386706829 5013551.5 9374.0 nc|ENSG00000204267|Q03519-2|TAP2;;chr6:32830440-32832333|20|17.45|0.93|4.22|-|0|TAP2,TAP2|1;;ENSG00000204267|ENST00000374897|TAP2 4.986069361368815 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9388 49.127 585.0 167440.0 25 0 15238.0 38826 TVGSKCVVWSS 11 121 576.7908218563329 1151.5670907794656 2 576.7913085818291 MULTI CID FTMS 0 0 0 9374 276803.59375 1.0 0 0.0 14 Unmodified _TVGSKCVVWSS_ ENSG00000180113|ENST00000316081|TDRD6;nc|ENSG00000180113|O60522-2|TDRD6 8.745405648335112 0.8338865417133445 3 {[TV]|[{I|L}S]}G 3 8 13.002 0.0 0.0 1.1291 0.0 0.0 0.0 891.4057549698848 891.4057549698848 1.892597145118435 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.2134679910804404 0.0 + {[TV]|[{I|L}S]}G 1.1291 + + 66 1 1.479 77416.6 1.0 4130 5256 9374 HBL1_DMSO_200M_050219_1,9388 HBL1_DMSO_200M_050219_1,9388,TVGSKCVVWSS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9389 49.139 702.0 332940.0 25 0 64852.0 -1 0 191 474.2883681509849 473.2810916843849 1 474.2892333865166 MULTI CID FTMS 0 0 0 9374 219444.265625 0.8889129753558311 2 -0.205596923828125 15 3 {I|L}AAS{I|L} 5 -1 + 45.341 0.0 0.0 9.5801 9.5801 85.086 0.0 0.0 0.0 14.973797812536912 4.650405720201206 4.650405720201206 1.3388041728556033 0 0.805462187404089 0.9208187539523752 0.9361818737241734 0.0 {I|L}AAS{I|L};[{I|L}A]AS{I|L};{I|L}AATV;[{I|L}A]SA{I|L};{I|L}DKV;{I|L}TQ{I|L};{[SA]|[TG]}{I|L}A{I|L};{[VA]|[{I|L}G]}TA{I|L};{[TV]|[{I|L}S]}AA{I|L};{I|L}A{I|L}SA 9.5801;9.2972;8.5975;7.5506;5.2403;4.4326;4.3411;4.3083;4.2552;4.1197 -;-;-;-;-;-;-;-;-;- 178 + 1 1.479 181306.6 1.0 4131 5256 9374 HBL1_DMSO_200M_050219_1,9389 HBL1_DMSO_200M_050219_1,9389, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9390 49.143 218.0 469780.0 25 0 64002.0 + 41977 VQLYELWA 8 112 511.2712916914152 1020.5280304496304 2 511.2699767947197 MULTI CID FTMS 0 0 0 9374 195499.90625 0.7467975043151869 -1 0.1212921142578125 16 Unmodified _VQLYELWA_ REV__ENSG00000198089|ENST00000400288|SFI1;REV__ENST00000382162.7_1_22:31904270-32000328:+|nuORF;REV__nc|ENSG00000198089|A8K8P3-10|SFI1;REV__nc|ENSG00000198089|A8K8P3-2|SFI1;REV__nc|ENSG00000198089|A8K8P3-3|SFI1;REV__nc|ENSG00000198089|A8K8P3-4|SFI1;REV__nc|ENSG00000198089|A8K8P3-5|SFI1;REV__nc|ENSG00000198089|A8K8P3-9|SFI1 8.593279151180031 0.7721714526254883 3 VV{M(Oxidation (M))|F} 3 -1 24.693 0.0 0.0 2.4196 0.0 0.0 0.0 672.3010958307249 672.3010958307249 13.855282168095211 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV{M(Oxidation (M))|F} 2.4196 - 257 + 1 1.479 84054.6 1.0 4132 5256 9374 HBL1_DMSO_200M_050219_1,9390 HBL1_DMSO_200M_050219_1,9390,VQLYELWA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9391 49.155 666.0 193300.0 25 0 8901.0 + 30267 QYMDQPKVY 9 169 586.2751921962031 1170.535831459206 2 586.2753784060478 MULTI CID FTMS 0 0 0 9374 186802.328125 1.0 0 0.0 17 Unmodified _QYMDQPKVY_ ENSG00000177888|ENST00000367405|ZBTB41;ENST00000467322.1_1_1:197128491-197145097:-|nuORF 20.453626601364224 0.2830276176381075 3 [YQ][MD]QPKVY 9 0 + 27.518 0.0 0.0 2.3509 2.3509 78.375 0.0 0.0 0.0 12.8251496441071 10.150312510170782 10.150312510170782 9.208187539523756 0 0.0 1.5228787452803376 0.0 0.25 + + [YQ][MD]QPKVY;[YQ][MD][AG]PKVY;[YQ][MD]QPKYV;[YQ][MD]QPYKV;[QA]V{[CA]|SS}M{[WT]|[RM]}VY;[QA]{[WS]|[C(Carbamidomethyl (C)){I|L}]}M{[WT]|[RM]}VY;[YQ][MD][AG]PKYV;[YQ][MD][AG]PYKV;[QA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[CS]NKVY;{[TV]|[{I|L}S]}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.3509;1.5642;1.3784;1.0145;0.86528;0.82158;0.59175;0.22784;0.21095;0.019769 +;-;-;-;-;-;-;-;-;- + 709 + 1 1.479 98761.2 1.0 4133 5256 9374 HBL1_DMSO_200M_050219_1,9391 HBL1_DMSO_200M_050219_1,9391,QYMDQPKVY False True QYMDQPKVY 49.154786 586.275378406048 1368648.0 9374.0 ENSG00000177888|ENST00000367405|ZBTB41;;ENST00000467322.1_1_1:197128491-197145097:-|nuORF 4.289658387502034 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9392 49.168 673.0 163400.0 25 0 10157.0 + -1 GVDLQEMVCA 10 134 569.2492089253421 1136.4838649174842 2 569.2494384646416 MULTI CID FTMS 0 0 0 9374 177965.578125 0.4993145809821145 -6 0.6516189575195312 18 Carbamidomethyl (C),Oxidation (M) _GVDLQEM(Oxidation (M))VC(Carbamidomethyl (C))A_ REV__ENSG00000095564|ENST00000265990|BTAF1 17.11289562659939 0.5604042439455784 3 [QP]SVTEC 7 -1 53.311 0.0 0.0 4.6909 0.0 0.0 0.0 389.146864755628 389.146864755628 24.67809723647838 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.674742501084005 0.1694451763165201 [QP]SVTEC 4.6909 - 279 1 1.479 89097.6 1.0 4134 5256 9374 HBL1_DMSO_200M_050219_1,9392 HBL1_DMSO_200M_050219_1,9392,GVDLQEMVCA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9393 49.179 679.0 227110.0 25 0 12326.0 + -1 NLEDCENV 8 157 496.704453063396 991.394353193592 2 496.7059509158134 MULTI CID FTMS 0 0 0 9374 176315.40625 0.9031182356286596 -1 0.1212921142578125 19 Carbamidomethyl (C) _NLEDC(Carbamidomethyl (C))ENV_ REV__ENSG00000049323|ENST00000404816|LTBP1;REV__nc|ENSG00000049323|Q14766-2|LTBP1;REV__nc|ENSG00000049323|Q14766-3|LTBP1;REV__nc|ENSG00000049323|Q14766-4|LTBP1;REV__nc|ENSG00000049323|Q14766-5|LTBP1 10.183394434864962 0.7604730176254005 3 {[QV]|[N{I|L}]|[RA]|[KV]}D 3 -1 25.929 0.0 0.0 2.6154 0.0 0.0 0.0 646.2154951215795 646.2154951215795 14.3348435778082 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3252574989159953 {[QV]|[N{I|L}]|[RA]|[KV]}D 2.6154 - 314 1 1.479 118214.3 1.0 4135 5256 9374 HBL1_DMSO_200M_050219_1,9393 HBL1_DMSO_200M_050219_1,9393,NLEDCENV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9394 49.193 775.0 421590.0 25 0 26381.0 + 45371 YSVCTFSV 8 234 453.2068297879701 904.39910664274 2 453.2162353396416 MULTI CID FTMS 0 0 0 -1 0 20 Unmodified _YSVCTFSV_ REV__ENSG00000259224|ENST00000412468|SLC35G6 19.438996006549623 0.6237395211498085 3 {[QG]|[NA]}G[{I|L}P]{I|L}PG 8 -1 33.822 0.0 0.0 3.7398 0.0 0.0 0.0 181.9770489243787 181.9770489243787 6.04728424724015 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.5228787452803376 {[QG]|[NA]}G[{I|L}P]{I|L}PG 3.7398 - 708 1 1.479 251720.0 1.0 4136 5256 9374 HBL1_DMSO_200M_050219_1,9394 HBL1_DMSO_200M_050219_1,9394,YSVCTFSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9396 49.197 0.81 79806000.0 25 0 9599400.0 + 3658 DAEMTTRMV 9 70 527.238406153333 1052.462259373466 2 527.2396118044853 MULTI CID FTMS 0 0 0 9395 66069276.0 0.810162092072111 1 -0.0951499938964843 1 Unmodified _DAEMTTRMV_ ENSG00000205220|ENST00000358514|PSMB10 57.72198328787511 0.0273433238377839 3 {[DA]|[EG]}EMTTRMV 9 0 + 88.153 0.0 0.0 8.3759 8.3759 97.072 0.0 0.0 0.0 42.84990674913949 8.027194418743804 8.027194418743804 26.46591250700361 0 1.3494850021680094 2.0 0.8494850021680094 0.0 + + {[DA]|[EG]}EMTTRMV;{[DA]|[EG]}E[W{M(Oxidation (M))|F}]RMV;{[DA]|[EG]}{M(Oxidation (M))|F}TEWWV;{[DA]|[EG]}EM[R{M(Oxidation (M))|F}]WV;{[DA]|[EG]}{M(Oxidation (M))|F}[WE]RMV;{[DA]|[EG]}{M(Oxidation (M))|F}VMWWV;[{M(Oxidation (M))|F}T]RTTM[C(Carbamidomethyl (C))H];{[DA]|[EG]}{M(Oxidation (M))|F}VWWMV;WE{[QS]|[NT]}HHMV;[{M(Oxidation (M))|F}T]WEWWV 8.3759;5.8612;5.5217;5.2903;5.1001;4.5958;4.3603;4.1245;4.0785;2.6088 +;-;-;-;-;-;-;-;-;- + 227 + 1 1.458 55587.0 1.0 4137 5257 9395 HBL1_DMSO_200M_050219_1,9396 HBL1_DMSO_200M_050219_1,9396,DAEMTTRMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9397 49.198 6.4 8721800.0 25 0 702280.0 + 13021 HASQPSLTV 9 85 470.2484443846493 938.4823358360984 2 470.2484924197197 MULTI CID FTMS 0 0 0 9395 8439761.0 0.5966924767037661 2 -0.2493667602539062 2 Unmodified _HASQPSLTV_ ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000175387|Q15796-2|SMAD2 49.93300154707207 0.0405168250806675 3 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TV 8 5 + 57.79 0.0 0.0 6.1578 6.1578 85.396 0.0 0.0 0.0 6.53212513775344 16.40978057358332 6.53212513775344 6.53212513775344 0 0.5 1.3979400086720375 0.9247425010840048 0.0 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TV;[{I|L}T]V{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TV;[HA]{[QS]|[NT]}[PS]{I|L}TV;[HA]{[QS]|[NT]}V[TP]TV;[PS][Y{I|L}]{M(Oxidation (M))|F}{I|L}TV;{[TV]|[{I|L}S]}H{[QG]|[NA]}[TP]TV;[HA]{[QS]|[NT]}V{[VA]|[{I|L}G]}EV;{[TV]|[{I|L}S]}[TP]A[HN]TV;{[TV]|[{I|L}S]}H[PA]{[QS]|[NT]}TV;[{I|L}T][PS]A[HN]TV 6.1578;5.4617;5.2838;5.0718;4.0682;3.9777;3.9504;3.926;3.3361;3.23 -;-;+;-;-;-;-;-;-;- + 451 1 1.458 48076.4 1.0 4138 5257 9395 HBL1_DMSO_200M_050219_1,9397 HBL1_DMSO_200M_050219_1,9397,HASQPSLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9398 49.2 26.0 4443000.0 25 0 370390.0 + -1 TAADFCIFGT 10 114 551.7486917740848 1101.4828306149695 2 551.7488891482353 MULTI CID FTMS 0 0 0 9395 1898325.125 0.4043042993315852 -1 0.1104469299316406 3 Carbamidomethyl (C) _TAADFC(Carbamidomethyl (C))IFGT_ REV__ENSG00000147481|ENST00000642720|SNTG1;REV__ENST00000524004.5_3_8:51571197-51621559:+|nuORF;REV__nc|ENSG00000147481|Q9NSN8-2|SNTG1 30.63653989081413 0.2803493085145199 3 [TA]ADY{I|L} 6 -1 61.159 0.0 0.0 5.5524 0.0 0.0 0.0 464.1646283729784 464.1646283729784 41.77317490243958 0.0 0.0 0.0 0 1.274227503252014 2.0 0.0 0.0 [TA]ADY{I|L} 5.5524 - 488 + 1 1.458 92014.3 1.0 4139 5257 9395 HBL1_DMSO_200M_050219_1,9398 HBL1_DMSO_200M_050219_1,9398,TAADFCIFGT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9399 49.201 27.0 2674500.0 25 0 216830.0 + 36478 TADASTYSSVT 11 97 368.1686414534291 1101.4840949604873 3 368.1685363650322 MULTI CID FTMS 0 0 0 9395 1857557.0 0.3269324303763092 -1 0.1104469299316406 4 Unmodified _TADASTYSSVT_ REV__ENSG00000034971|ENST00000037502|MYOC 17.11289562659939 0.6791789249425932 3 [TA]D[RH]YD[QP] 9 -1 + 43.736 0.0 0.0 3.9707 3.9707 71.288 0.0 0.0 0.0 13.194517295400328 7.147642715192504 7.147642715192504 1.2763625255165325 0 0.4247425010840047 2.0 0.2887254899964357 0.0 [TA]D[RH]YD[QP];[TA]DY[RH]D[QP];{[YD]|[{M(Oxidation (M))|F}M]}AT[RH]D[QP];[TA]D[RH]WMW;{[DA]|[EG]}T[RH]YD[QP];{[DA]|[EG]}TY[RH]D[QP];{[DA]|[EG]}YT[RH]D[QP];{[SA]|[TG]}E[RH]YD[QP];{[SA]|[TG]}EY[RH]D[QP];{[DA]|[EG]}T[RH]WMW 3.9707;3.8548;2.7728;2.6417;2.4139;2.2981;2.1846;1.6451;1.5292;1.085 -;-;-;-;-;-;-;-;-;- 225 1 1.458 61403.0 1.0 4140 5257 9395 HBL1_DMSO_200M_050219_1,9399 HBL1_DMSO_200M_050219_1,9399,TADASTYSSVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9400 49.202 22.0 2331100.0 25 0 233510.0 + 24967 MPPPPPQGV 9 87 460.2385793050109 918.462605676822 2 460.2397949099541 MULTI CID FTMS 0 0 0 9395 1809569.0 0.0601117654187193 34 -2.98586654663086 5 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 40.44857923139169 0.0729940656229577 3 P[{M(Oxidation (M))|F}T]GV 5 6 24.142 0.0 0.0 2.6285 0.0 0.0 399.21004443729606 0.0 399.21004443729606 0.0 9.704751719805014 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 P[{M(Oxidation (M))|F}T]GV 2.6285 - 249 + 1 1.458 44321.2 1.0 4141 5257 9395 HBL1_DMSO_200M_050219_1,9400 HBL1_DMSO_200M_050219_1,9400,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9401 49.203 20.0 3103800.0 25 0 304870.0 -1 NTLVVRQRCG 10 48 601.8244267583193 1201.6343005834383 2 601.8251220583916 MULTI CID FTMS 0 0 0 9395 1015598.375 0.1853920936790158 2 -0.2493667602539062 6 Carbamidomethyl (C) _NTLVVRQRC(Carbamidomethyl (C))G_ ENSG00000160323|ENST00000355699|ADAMTS13;ENST00000485925.5_1_9:136305545-136324175:+|nuORF;nc|ENSG00000160323|Q76LX8-3|ADAMTS13;nc|ENSG00000160323|Q76LX8|ADAMTS13 5.731851221503515 0.7001233259664787 3 {[QS]|[NT]}{I|L} 3 -1 17.517 0.0 0.0 1.4578 0.0 0.0 0.0 870.4372540348635 870.4372540348635 3.0803717656404253 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3807196863200844 {[QS]|[NT]}{I|L} 1.4578 + + 23 1 1.458 52043.0 1.0 4142 5257 9395 HBL1_DMSO_200M_050219_1,9401 HBL1_DMSO_200M_050219_1,9401,NTLVVRQRCG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9402 49.205 101.0 979900.0 25 0 153490.0 + 15355 IPMKIRNV 8 94 324.2003730296235 0 324.2003356814384 PEAK CID FTMS 0 0 0 9395 771429.4375 0.6777357711064214 2 -0.2493667602539062 7 Unmodified _IPMKIRNV_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 13.042465956692816 0.507358928091419 3 {I|L}K 2 6 7.0783 0.0 0.0 1.0951 0.0 0.0 146.07799941908087 256.11371790103755 402.1917173201184 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}K 1.0951 - 17 + 1 1.458 83285.5 1.0 4143 5257 9395 HBL1_DMSO_200M_050219_1,9402 HBL1_DMSO_200M_050219_1,9402,IPMKIRNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9403 49.208 135.0 857230.0 25 0 55291.0 + 16329 IYHNPTANSF 10 143 582.2774594775573 1162.5403660219145 2 582.2774536013603 MULTI CID FTMS 0 0 0 9395 669021.8125 0.5288969202443123 2 -0.2493667602539062 8 Unmodified _IYHNPTANSF_ ENSG00000125753|ENST00000245932|VASP;ENST00000586619.1_1_19:46010999-46025451:+|nuORF 57.72198328787511 0.0425618229276495 3 [HN]Y{I|L}PTANS{M(Oxidation (M))|F} 10 4 + 79.946 0.0 0.0 6.8768 6.8768 89.982 0.0 0.0 0.0 10.299632233774432 16.53212513775344 10.299632233774432 9.164539485499262 0 1.0 0.8538719643217619 0.4247425010840047 0.805462187404089 [HN]Y{I|L}PTANS{M(Oxidation (M))|F};[HN]Y{I|L}PTAGGS{M(Oxidation (M))|F};{[WN]|[YH]}{I|L}NPTANS{M(Oxidation (M))|F};{[WN]|[YH]}N{I|L}PTANS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[Y{I|L}]TANS{M(Oxidation (M))|F};[NS][YR]Y{I|L}NS{M(Oxidation (M))|F};[NS]A{[QV]|[N{I|L}]|[RA]|[KV]}[EP]ANS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[TA]Y{I|L}NS{M(Oxidation (M))|F};{[WN]|[YH]}{I|L}NPTAGGS{M(Oxidation (M))|F};{[WN]|[YH]}{I|L}GGPTANS{M(Oxidation (M))|F} 6.8768;6.0885;5.9909;5.7319;5.3714;5.2885;5.2744;5.2419;5.2026;5.2026 -;-;-;-;-;-;-;-;-;- 2974 1 1.458 91006.3 1.0 4144 5257 9395 HBL1_DMSO_200M_050219_1,9403 HBL1_DMSO_200M_050219_1,9403,IYHNPTANSF True True IYHNPTANSF 49.207979 582.27745360136 21601444.0 9395.0 ENST00000586619.1_1_19:46010999-46025451:+|nuORF;;ENSG00000125753|ENST00000245932|VASP 6.864684422810872 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9404 49.217 490.0 386070.0 25 0 97128.0 -1 0 62 1121.1324077054633 3360.37539371659 3 1121.467700183392 MULTI CID FTMS 0 0 0 9395 571156.5 0.5865667448605549 -1 0.1104469299316406 9 3 YG[HT]Q 5 -1 11.51 0.0 0.0 0.34253 0.0 0.0 1781.6191203785022 989.50055872135 2771.119679099852 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 YG[HT]Q 0.34253 - 31 + 1 1.458 160857.2 1.0 4145 5257 9395 HBL1_DMSO_200M_050219_1,9404 HBL1_DMSO_200M_050219_1,9404, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9405 49.224 395.0 1109500.0 25 0 277540.0 + 45800 YYLVKREDY 9 140 416.88028475997794 1247.6190248801338 3 416.8802673220634 MULTI CID FTMS 0 0 0 9395 568327.375 0.3768655142142093 -2 0.2317390441894531 10 Unmodified _YYLVKREDY_ ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 74.19965305603844 0.0194755241623067 3 YY{I|L}VK{[RE]|[WV]}DY 9 0 + 82.744 0.0 0.0 6.6322 6.6322 78.174 0.0 0.0 0.0 33.46787486224656 0.3444064470390628 0.3444064470390628 0.3444064470390628 0 0.3807196863200844 1.6989700043360187 1.0994850021680094 1.411954370472159 + + YY{I|L}VK{[RE]|[WV]}DY;YY{I|L}VYK{[TV]|[{I|L}S]}{[CP]|[EA]};YY{I|L}VKYGSQQ;YY{I|L}VYKGSQQ;YY{I|L}VKY{[TV]|[{I|L}S]}{[CP]|[EA]};YY{I|L}YVK{[TV]|[{I|L}S]}{[CP]|[EA]};YY{I|L}YVKGSQQ;YYY{I|L}VK{[TV]|[{I|L}S]}{[CP]|[EA]};YY{I|L}VY{[TV]|[{I|L}S]}[DG]R;YY{I|L}V[RH][TP]{[CP]|[EA]} 6.6322;6.6046;6.394;6.3929;6.3449;6.2232;6.0116;5.5152;5.4881;5.3384 +;-;-;-;-;-;-;-;-;- + 890 + 1 1.458 345166.2 1.0 4146 5257 9395 HBL1_DMSO_200M_050219_1,9405 HBL1_DMSO_200M_050219_1,9405,YYLVKREDY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9406 49.231 410.0 398460.0 25 0 43462.0 -1 CPNARCQFAFY 11 107 717.3072830646744 1432.600013196149 2 717.3076049685478 MULTI CID FTMS 0 0 0 9395 513537.15625 0.3233274543622241 1 -0.0951499938964843 11 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PNARC(Carbamidomethyl (C))QFAFY_ ENSG00000129353|ENST00000335757|SLC44A2;ENST00000589561.5_1_19:10746968-10754058:+|nuORF;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;nc|ENSG00000129353|Q8IWA5-3|SLC44A2 13.90604991867851 0.7458848613461305 3 [NP]HDEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 86.061 0.0 0.0 6.0073 6.0073 76.622 0.0 0.0 0.0 0.5115252244738144 4.806579926508306 0.5115252244738144 0.5115252244738144 0 0.8935078169319297 0.7958800173440752 0.7302046884880937 1.2302046884880935 [NP]HDEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;V[DN]ANQQAEM[WQ];{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQNA{M(Oxidation (M))|F}Y;[NP]HDEA[AG]QNA{M(Oxidation (M))|F}Y;[NP]HDEAQQGGA{M(Oxidation (M))|F}Y;[NP]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y 6.0073;5.9716;5.9006;5.5973;5.4518;5.3722;5.3722;5.3722;5.3365;5.3365 -;-;-;-;-;-;-;-;-;- 9992 1 1.458 117088.2 1.0 4147 5257 9395 HBL1_DMSO_200M_050219_1,9406 HBL1_DMSO_200M_050219_1,9406,CPNARCQFAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9407 49.234 154.0 1440300.0 25 0 102180.0 + 16842 KIDEHHFVAV 10 136 398.8804068391868 1193.6193911177604 3 398.8804199099541 MULTI CID FTMS 0 0 0 9395 494845.90625 0.0894835006593099 -2 0.2317390441894531 12 Unmodified _KIDEHHFVAV_ ENSG00000149313|ENST00000278618|AASDHPPT 57.24910588100465 0.0438022649904578 3 [K{I|L}]DEHH{M(Oxidation (M))|F}VAV 10 0 + 70.214 0.0 0.0 5.8824 5.8824 89.761 0.0 0.0 0.0 15.881559104193244 16.53212513775344 15.881559104193244 15.881559104193244 0 0.5 0.958607314841775 0.5387254899964358 1.1549471895720984 + + [K{I|L}]DEHH{M(Oxidation (M))|F}VAV;[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]QH{M(Oxidation (M))|F}VAV;{[VA]|[{I|L}G]}[VS]EHH{M(Oxidation (M))|F}VAV;{[YC]|[HE]}DH{I|L}K{M(Oxidation (M))|F}VAV;{[YC]|[HE]}D[K{I|L}]H{M(Oxidation (M))|F}VAV;{[ES]|[DT]|[{I|L}C]}VKQHE[PA]AV;[K{I|L}]D[C(Carbamidomethyl (C))D]K{M(Oxidation (M))|F}VAV;{[YC]|[HE]}DH{M(Oxidation (M))|F}{I|L}KVAV;{[ES]|[DT]|[{I|L}C]}KVQHE[PA]AV;{[{M(Oxidation (M))|F}H]|[RQ]}[HV]EEKVAV 5.8824;4.5519;4.4406;4.2463;4.1773;4.1629;3.5663;3.5321;3.5106;3.4995 +;-;-;-;-;-;-;-;-;- + 4772 1 1.458 185956.7 1.0 4148 5257 9395 HBL1_DMSO_200M_050219_1,9407 HBL1_DMSO_200M_050219_1,9407,KIDEHHFVAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9408 49.238 205.0 951690.0 25 0 111850.0 + 15537 IPVSRSPL 8 145 434.7662036322309 867.5178543312618 2 434.7657348513603 MULTI CID FTMS 0 0 0 9395 455571.28125 0.4064776703685219 -5 0.5368118286132812 13 Unmodified _IPVSRSPL_ REV__ENST00000378302.6_1_13:50134118-50140783:-|nuORF 30.63653989081413 0.3996269429323407 3 {I|L}PPR[VS]S{I|L} 8 -1 + 57.372 0.0 0.0 6.6134 6.6134 81.672 0.0 0.0 0.0 41.63000502631711 2.1901620383533853 2.1901620383533853 2.4357557584207328 0 0.4247425010840047 2.0 0.4531198197908842 0.0 {I|L}PPR[VS]S{I|L};{I|L}PPR[TA]T{I|L};{I|L}PPR[VS]TV;{I|L}PPS[RV]S{I|L};{I|L}PPS[RV]TV 6.6134;6.3326;6.1224;6.0634;5.5724 -;-;-;-;- 532 + 1 1.458 153194.2 1.0 4149 5257 9395 HBL1_DMSO_200M_050219_1,9408 HBL1_DMSO_200M_050219_1,9408,IPVSRSPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9409 49.24 108.0 1640700.0 25 0 215140.0 + 3585 DAAISKVQV 9 125 465.7663992147045 929.518245496209 2 465.7662536501884 MULTI CID FTMS 0 0 0 9395 448241.75 0.0982845764158282 -2 0.2317390441894531 14 Unmodified _DAAISKVQV_ ENSG00000127481|ENST00000375254|UBR4;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4 92.65332237495696 0.0139087009896299 3 {[DA]|[EG]}A{I|L}SKVQV 9 0 + 90.424 0.0 0.0 9.7281 9.7281 89.205 0.0 0.0 0.0 24.13734275855268 3.853508813640161 3.853508813640161 3.853508813640161 0 1.66944517631652 1.6989700043360187 0.3252574989159953 1.510574239612792 + + {[DA]|[EG]}A{I|L}SKVQV;{[DA]|[EG]}A{I|L}SKVVQ;{[DA]|[EG]}A{I|L}SKV[AG]V;{[DA]|[EG]}A{I|L}SKVVGA;{[DA]|[EG]}A{I|L}V[KS]QV;{[DA]|[EG]}A{I|L}V[KS]VQ;{[DA]|[EG]}A{I|L}V[KS][AG]V;{[DA]|[EG]}A{I|L}V[KS]VGA;{[DA]|[EG]}A{I|L}KKT[PS];{[DS]|[MA]|[CV]|TT}[PA]SKVQV 9.7281;9.3135;8.1456;7.8352;7.3391;6.9245;6.0672;5.7569;4.3184;4.2418 +;-;-;-;-;-;-;-;-;- + 1368 + 1 1.458 136697.6 1.0 4150 5257 9395 HBL1_DMSO_200M_050219_1,9409 HBL1_DMSO_200M_050219_1,9409,DAAISKVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9410 49.251 539.0 862270.0 25 0 70915.0 + 18284 KVIGGFAGT 9 237 425.2451508110648 848.4757486889296 2 425.2450134158134 MULTI CID FTMS 0 0 0 9395 334466.625 0.3076561950790103 -1 0.1104469299316406 15 Unmodified _KVIGGFAGT_ ENSG00000165948|ENST00000555523|IFI27L1 78.14939416004806 0.0179651292570206 3 V{I|L}GWAGT 7 3 38.955 0.0 0.0 4.5912 0.0 0.0 146.10729273365456 0.0 146.10729273365456 0.0 19.39220077906249 0.0 0.0 0 1.305462187404089 0.0 1.5044321917401078 0.0 V{I|L}GWAGT 4.5912 - 3901 + 1 1.458 352433.7 1.0 4151 5257 9395 HBL1_DMSO_200M_050219_1,9410 HBL1_DMSO_200M_050219_1,9410,KVIGGFAGT True True KVIGGFAGT 49.250923 425.245013415813 16760694.0 9395.0 ENSG00000165948|ENST00000555523|IFI27L1 4.993290901184082 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9411 49.261 547.0 669170.0 25 0 61997.0 + 45802 YYLVKREDY 9 143 624.8167768557602 1247.6190007783202 2 625.3179199099541 MULTI CID FTMS 0 0 0 9395 304803.25 0.3385494344379853 -1 0.1104469299316406 16 Unmodified _YYLVKREDY_ ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 93.16586880292088 0.0136995152735431 3 YY{I|L}VK{[RE]|[WV]}DY 9 0 + 96.13 0.0 0.0 7.705 7.705 87.258 0.0 0.0 0.0 36.47817481888637 4.230078252872502 4.230078252872502 4.230078252872502 0 0.9247425010840048 2.0 0.9604093769761876 1.8226825097560424 + + YY{I|L}VK{[RE]|[WV]}DY;YY{I|L}VYK[WD]V;YY{I|L}VKY[WD]V;YY{I|L}YVK[WD]V;YY{I|L}VY[NG][KT]Q;YYY{I|L}VK[WD]V;YY{I|L}YV[NG][KT]Q;YY{I|L}Y{[MG]|[TS]}[Q{I|L}]VV;YYY{I|L}V[NG][KT]Q;YYY{I|L}{[MG]|[TS]}[Q{I|L}]VV 7.705;7.366;7.3477;6.9652;6.0156;5.8974;5.6149;5.3932;4.547;4.3254 +;-;-;-;-;-;-;-;-;- + 682 + 1 1.458 266264.8 1.0 4152 5257 9395 HBL1_DMSO_200M_050219_1,9411 HBL1_DMSO_200M_050219_1,9411,YYLVKREDY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9412 49.262 83.0 985010.0 25 0 253340.0 + 45916 YYVDTAVRHV 10 86 408.2120483915804 1221.6143157749414 3 408.2120849490166 MULTI CID FTMS 0 0 0 9395 300410.625 1.0 0 0.0 17 Unmodified _YYVDTAVRHV_ ENSG00000149273|ENST00000531188|RPS3;nc|ENSG00000149273|P23396-2|RPS3 38.17557092003332 0.1768326257063233 3 YYVDTAVRHV 10 0 + 72.238 0.0 0.0 5.9133 5.9133 90.553 0.0 0.0 0.0 60.45487430885346 9.101523083377458 9.101523083377458 21.760912590556806 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + + YYVDTAVRHV;YYVDV[TA]RHV 5.9133;4.132 +;- + 165 + 1 1.458 69759.8 1.0 4153 5257 9395 HBL1_DMSO_200M_050219_1,9412 HBL1_DMSO_200M_050219_1,9412,YYVDTAVRHV False True YYVDTAVRHV 49.262396 408.212084949017 3114471.375 9395.0 nc|ENSG00000149273|P23396-2|RPS3;;ENSG00000149273|ENST00000531188|RPS3 8.192696889241537 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9413 49.276 798.0 418090.0 25 0 61341.0 -1 0 82 1069.1058977286802 3204.295863786241 3 1069.773852527142 MULTI CID FTMS 0 0 0 9395 297831.875 1.0 0 0.0 18 3 C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}C(Carbamidomethyl (C))G 5 -1 15.662 0.0 0.0 0.48878 0.0 0.0 1312.4836188200215 1201.5791904944824 2514.062809314504 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}C(Carbamidomethyl (C))G 0.48878 - 542 + 1 1.458 258939.1 1.0 4154 5257 9395 HBL1_DMSO_200M_050219_1,9413 HBL1_DMSO_200M_050219_1,9413, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9414 49.287 539.0 357610.0 25 0 25219.0 41663 VPQGPNPVVV 10 156 503.28832465515376 0 503.2885009646416 PEAK CID FTMS 0 0 0 9395 290932.5 1.0 0 0.0 19 Unmodified _VPQGPNPVVV_ ENSG00000117408|ENST00000372343|IPO13 13.90604991867851 0.345182617568752 3 VM 2 9 13.469 0.0 0.0 1.3408 0.0 0.0 216.14434476374987 555.2912648206607 771.4356095844105 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 VM 1.3408 - 143 + 1 1.458 144634.9 1.0 4155 5257 9395 HBL1_DMSO_200M_050219_1,9414 HBL1_DMSO_200M_050219_1,9414,VPQGPNPVVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9415 49.288 43.0 960470.0 25 0 60840.0 10045 FPPGAAQALV 10 76 485.7716224139696 0 485.7727844119072 PEAK CID FTMS 0 0 0 9395 277816.0 0.2970129493341715 -5 0.5368118286132812 20 Unmodified _FPPGAAQALV_ ENSG00000015676|ENST00000355451|NUDCD3;ENST00000464812.1_1_7:44525191-44530199:-|nuORF 10.073929032068715 0.3742530088597855 3 PP 2 8 11.766 0.0 0.0 1.2136 0.0 0.0 147.0668852422197 625.3303927057249 772.3972779479445 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + PP 1.2136 + + 29 + 1 1.458 38158.9 1.0 4156 5257 9395 HBL1_DMSO_200M_050219_1,9415 HBL1_DMSO_200M_050219_1,9415,FPPGAAQALV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9417 49.293 52.0 1366700.0 25 0 138620.0 + 39188 TYQKLARAL 9 72 532.3160750745161 1062.617597215832 2 532.3160278201103 MULTI CID FTMS 0 0 0 9416 1142871.625 0.368352671066338 2 -0.2468452453613281 1 Unmodified _TYQKLARAL_ ENSG00000269404|ENST00000595883|SPIB;nc|ENSG00000269404|Q01892-3|SPIB 34.40172386719151 0.1061884637610825 3 TYQK{I|L}A 6 3 71.191 0.0 0.0 6.6996 0.0 0.0 0.0 355.2103365533813 355.2103365533813 60.353254280617136 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.4247425010840047 + TYQK{I|L}A 6.6996 + + 72 + 1 1.447 61501.6 1.0 4157 5258 9416 HBL1_DMSO_200M_050219_1,9417 HBL1_DMSO_200M_050219_1,9417,TYQKLARAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9418 49.296 140.0 467680.0 25 0 46619.0 + 16595 KDRLVKEKM 9 97 573.8345247441038 1145.6544965550074 2 573.8344604372978 MULTI CID FTMS 0 0 0 9416 570717.375 0.0690871459331038 3 -0.3560905456542969 2 Unmodified _KDRLVKEKM_ REV__ENSG00000129534|ENST00000310806|MIS18BP1;REV__nc|ENSG00000129534|Q6P0N0-2|MIS18BP1 10.823927491677226 0.5436922275383211 3 [VP][KS]VHVPV{[QG]|[NA]} 11 -1 + 47.808 0.0 0.0 4.173 4.173 79.381 0.0 0.0 0.0 11.091444694250676 7.367585652254185 7.367585652254185 6.989700043360188 0 0.5 1.0 1.1549471895720984 0.0 [VP][KS]VHVPV{[QG]|[NA]};[VP][VS]KHVPV{[QG]|[NA]};[KS][VP]VHVPV{[QG]|[NA]};[VP][KS]V[VP]HV{[QG]|[NA]};[VP][VS]K[VP]HV{[QG]|[NA]};[KS][VP]V[VP]HV{[QG]|[NA]} 4.173;3.5629;3.2048;3.1026;2.4925;2.1345 -;-;-;-;-;- 235 1 1.447 53249.7 1.0 4158 5258 9416 HBL1_DMSO_200M_050219_1,9418 HBL1_DMSO_200M_050219_1,9418,KDRLVKEKM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9419 49.297 12.0 3048200.0 25 0 434460.0 + 34889 SQIDPSSIERA 11 47 601.8039180680785 1201.5932832029569 2 601.8032104372978 MULTI CID FTMS 0 0 0 9416 3338229.0 0.3917464060789051 -1 0.0951499938964843 3 Unmodified _SQIDPSSIERA_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 14.218169984304629 0.7393924188826537 3 {[QS]|[NT]}{I|L}D 4 7 33.188 0.0 0.0 2.762 0.0 0.0 0.0 755.3697168789912 755.3697168789912 33.187587626244124 0.0 0.0 0.0 0 1.5 0.0 0.0 0.3494850021680094 + {[QS]|[NT]}{I|L}D 2.762 + + 19 1 1.447 34592.7 1.0 4159 5258 9416 HBL1_DMSO_200M_050219_1,9419 HBL1_DMSO_200M_050219_1,9419,SQIDPSSIERA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9420 49.299 113.0 583610.0 25 0 27979.0 + 16844 KIDEHHFVAV 10 102 597.8170337118727 1193.6195144905453 2 597.8173095583916 MULTI CID FTMS 0 0 0 9416 844708.0625 0.6541828639336639 -1 0.0951499938964843 4 Unmodified _KIDEHHFVAV_ ENSG00000149313|ENST00000278618|AASDHPPT 53.40400417844725 0.0601721406801337 3 {[VA]|[{I|L}G]}[VS]EHH{M(Oxidation (M))|F}VAV 11 3 + 59.396 0.0 0.0 4.9761 4.9761 74.792 0.0 0.0 0.0 0.6240198196649303 41.34826935101471 0.6240198196649303 1.5314512743768702 0 1.7440840204505514 1.0969100130080565 0.3494850021680094 0.0 {[VA]|[{I|L}G]}[VS]EHH{M(Oxidation (M))|F}VAV;[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]QH{M(Oxidation (M))|F}VAV;{[VA]|[{I|L}G]}[VS][C(Carbamidomethyl (C))D]K{M(Oxidation (M))|F}VAV;[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T][AG]H{M(Oxidation (M))|F}VAV;HH[H{I|L}][HC]{I|L}KAV;[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]QYYKV;HH[H{I|L}][HC]{I|L}AKV;[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]Q[KQ]V[TP] 4.9761;4.8478;4.3466;3.761;1.8012;1.0728;0.7967;0.47456 -;-;-;-;-;-;-;- 306 1 1.447 53514.8 1.0 4160 5258 9416 HBL1_DMSO_200M_050219_1,9420 HBL1_DMSO_200M_050219_1,9420,KIDEHHFVAV True True KIDEHHFVAV 49.299152 597.817309558392 90372390.0 9416.0 ENSG00000149313|ENST00000278618|AASDHPPT 7.963366985321045 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9421 49.301 81.0 500770.0 25 0 24444.0 + -1 AQYENPPHI 9 86 535.236357544641 0 535.2364379763603 PEAK CID FTMS 0 0 0 9416 480883.90625 0.58237554867291 2 -0.2468452453613281 5 Oxidation (M) _DAEM(Oxidation (M))TTRMV_ ENST00000595325.5_1_19:8616850-8642307:-|nuORF;ENSG00000142347|ENST00000644032|MYO1F;ENST00000594774.5_1_19:8618146-8642307:-|nuORF;ENSG00000157483|ENST00000288235|MYO1E;ENST00000594977.5_1_19:8612968-8642307:-|nuORF 15.248480904072842 0.2520662914010398 3 EMT 3 -1 15.952 0.0 0.0 1.493 0.0 0.0 186.06413247033817 518.2386568658811 704.3027893362193 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 EMT 1.493 + + 48 + 1 1.447 36542.9 1.0 4161 5258 9416 HBL1_DMSO_200M_050219_1,9421 HBL1_DMSO_200M_050219_1,9421,DAEMTTRMV False False AQYENPPHI 49.300991 535.23643797636 2387734.5 9416.0 ENST00000595325.5_1_19:8616850-8642307:-|nuORF;;ENSG00000142347|ENST00000644032|MYO1F;;ENST00000594774.5_1_19:8618146-8642307:-|nuORF;;ENSG00000157483|ENST00000288235|MYO1E;;ENST00000594977.5_1_19:8612968-8642307:-|nuORF 2.358871936798096 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9422 49.304 140.0 820900.0 25 0 95231.0 + 2441 AQTPPGPSL 9 114 434.2320132445057 866.4494735558114 2 434.2321044802666 MULTI CID FTMS 0 0 0 9416 486717.34375 0.4415037704389198 -1 0.0951499938964843 6 Unmodified _AQTPPGPSL_ ENSG00000167978|ENST00000301740|SRRM2;nc|ENSG00000167978|Q9UQ35-2|SRRM2 46.020951573049366 0.0490941689151868 3 [QA]T 3 6 20.462 0.0 0.0 2.3616 0.0 0.0 0.0 563.2826394095802 563.2826394095802 4.018518791810649 0.0 0.0 0.0 0 0.5 0.5376020021010439 0.0 0.5649093276264391 + [QA]T 2.3616 + + 129 1 1.447 93208.0 1.0 4162 5258 9416 HBL1_DMSO_200M_050219_1,9422 HBL1_DMSO_200M_050219_1,9422,AQTPPGPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9423 49.312 491.0 419800.0 25 0 20857.0 + 25311 NAGPPSHII 9 155 453.24574919642566 904.4769454596512 2 453.2461120486259 MULTI CID FTMS 0 0 0 9416 354930.46875 0.1670615986173062 -4 0.4100761413574219 7 Unmodified _NAGPPSHII_ ENSG00000132128|ENST00000617190|LRRC41;nc|ENSG00000132128|Q15345-3|LRRC41 42.09456458481378 0.0639583784996157 3 {[QG]|[NA]}GP[PS]H{I|L}{I|L} 9 0 + 45.345 0.0 0.0 5.0134 5.0134 73.077 0.0 0.0 0.0 0.4588001734407498 0.4588001734407498 0.4588001734407498 0.4588001734407498 0 0.805462187404089 2.0 0.0 0.0 + + {[QG]|[NA]}GP[PS]H{I|L}{I|L};{[QG]|[NA]}G{I|L}P{I|L}P[HS];{[QG]|[NA]}GP{I|L}P{I|L}[HS];{[QG]|[NA]}{I|L}GP{I|L}P[HS];{[QG]|[NA]}{I|L}[PG]P{I|L}[HS];GGAG{I|L}P{I|L}P[HS];GGA{I|L}GP{I|L}P[HS];GGQ{I|L}P{I|L}P[HS];{[QN]|[E{I|L}]|[KN]}P{I|L}P{I|L}[HS];GGAGP{I|L}P{I|L}[HS] 5.0134;4.9627;4.7139;4.4917;3.2274;2.2562;2.2062;1.8181;1.711;1.427 +;-;-;-;-;-;-;-;-;- + 543 + 1 1.447 156976.8 1.0 4163 5258 9416 HBL1_DMSO_200M_050219_1,9423 HBL1_DMSO_200M_050219_1,9423,NAGPPSHII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9424 49.32 448.0 297970.0 25 0 18444.0 8661 EVFSDNMFC 9 163 546.2118761512891 1090.409199369378 2 546.2123901247978 MULTI CID FTMS 0 0 0 9416 341368.25 0.4493521862049606 2 -0.2468452453613281 8 Unmodified _EVFSDNMFC_ ENSG00000139178|ENST00000266542|C1RL;ENST00000544702.5_1_12:7248989-7252531:-|nuORF 4.75600775471527 0.7486543447549536 3 {NN|[MP]|[D{I|L}]|[EV]}D 3 6 13.798 0.0 0.0 1.2654 0.0 0.0 0.0 744.2461799204124 744.2461799204124 2.5383948915087853 0.0 0.0 0.0 0 0.0 1.154901959985743 0.1307196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}D 1.2654 - 141 1 1.447 105637.1 1.0 4164 5258 9416 HBL1_DMSO_200M_050219_1,9424 HBL1_DMSO_200M_050219_1,9424,EVFSDNMFC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9425 49.329 479.0 428670.0 25 0 31199.0 -1 PLSPPLCTL 9 221 499.274702651945 996.53485237069 2 499.7778198122978 MULTI CID FTMS 0 0 0 9416 341367.59375 0.5446112824926708 5 -0.4873390197753906 9 Carbamidomethyl (C) _PLSPPLC(Carbamidomethyl (C))TL_ ENSG00000148362|ENST00000371620|PAXX;nc|ENSG00000148362|Q9BUH6-2|PAXX 23.1484247019978 0.2366544122328345 3 [VP]KVESSA 8 -1 30.39 0.0 0.0 3.0496 0.0 0.0 0.0 196.06992252133372 196.06992252133372 -1.8830539741389167 0.0 -1.8830539741389167 0.0 0 0.7302046884880937 0.8860566476931632 0.0 0.0 [VP]KVESSA 3.0496 - 7376 1 1.447 158958.3 1.0 4165 5258 9416 HBL1_DMSO_200M_050219_1,9425 HBL1_DMSO_200M_050219_1,9425,PLSPPLCTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9426 49.333 226.0 859540.0 25 0 69638.0 23893 LVLRLPWRV 9 152 384.5839654290775 1150.7300668874325 3 384.5837890505791 MULTI CID FTMS 0 0 0 9416 317908.25 0.7523712153887752 2 -0.2468452453613281 10 Unmodified _LVLRLPWRV_ ENSG00000154305|ENST00000344922|MIA3;ENST00000470521.1_1_1:222791452-222819114:+|nuORF;nc|ENSG00000154305|Q5JRA6-2|MIA3;nc|ENSG00000154305|Q5JRA6-3|MIA3 8.155526934196011 0.6299788542272896 3 EKE{[WT]|[RM]}V 6 7 31.56 0.0 0.0 2.7426 0.0 0.0 360.3299822572274 0.0 360.3299822572274 0.0 22.737283022428286 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.4247425010840047 EKE{[WT]|[RM]}V 2.7426 - 901 + 1 1.447 159469.2 1.0 4166 5258 9416 HBL1_DMSO_200M_050219_1,9426 HBL1_DMSO_200M_050219_1,9426,LVLRLPWRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9427 49.345 686.0 270910.0 25 0 58603.0 -1 0 63 1158.1412909189787 3471.4020433571363 3 1158.808520495892 MULTI CID FTMS 0 0 0 9416 296837.46875 0.1617537653374729 -4 0.4100761413574219 11 3 E 1 -1 6.9897 0.0 0.0 0.20135 0.0 0.0 2815.1728421873545 524.1620988443244 3339.3349410316787 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20135 - 30 + 1 1.447 147335.0 1.0 4167 5258 9416 HBL1_DMSO_200M_050219_1,9427 HBL1_DMSO_200M_050219_1,9427, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9428 49.354 532.0 574440.0 25 0 45137.0 + 18181 KTVQDLTSV 9 221 495.77632793638185 989.5381029395636 2 495.7759277224541 MULTI CID FTMS 0 0 0 9416 240713.953125 0.3827556521311363 -1 0.0951499938964843 12 Unmodified _KTVQDLTSV_ ENSG00000230989|ENST00000433866|HSBP1 86.33184430468982 0.0159826143231117 3 {NN|[MP]|[D{I|L}]|[EV]}QSK{I|L}TSV 9 4 + 77.903 0.0 0.0 7.8727 7.8727 84.52 0.0 0.0 0.0 2.152052060692725 8.46787486224656 2.152052060692725 2.152052060692725 0 0.8494850021680094 1.0457574905606752 1.8885989491816009 1.0044321917401078 {NN|[MP]|[D{I|L}]|[EV]}QSK{I|L}TSV;{[TV]|[{I|L}S]}ENK{I|L}TSV;{[TV]|[{I|L}S]}KQD{I|L}TSV;{NN|[MP]|[D{I|L}]|[EV]}TNK{I|L}TSV;{[TV]|[{I|L}S]}QDK{I|L}TSV;{[TV]|[{I|L}S]}QKD{I|L}TSV;{NN|[MP]|[D{I|L}]|[EV]}NTK{I|L}TSV;[VS]G{[CP]|[EA]}K{I|L}TSV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}SK{I|L}TSV;[TA]PSSK{I|L}TSV 7.8727;7.6552;7.6293;7.5769;7.5752;7.5578;7.4422;7.3936;7.2982;7.2879 -;-;-;-;-;-;-;-;-;- 8588 1 1.447 228275.7 1.0 4168 5258 9416 HBL1_DMSO_200M_050219_1,9428 HBL1_DMSO_200M_050219_1,9428,KTVQDLTSV True True KTVQDLTSV 49.354474 495.775927722454 2090745.875 9416.0 ENSG00000230989|ENST00000433866|HSBP1 5.507715702056885 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9429 49.365 518.0 192320.0 25 0 19579.0 + 38742 TVADVRTLPNA 11 124 578.8179603369101 0 578.8194457888603 PEAK CID FTMS 0 0 0 9416 241489.140625 1.0 0 0.0 13 Unmodified _TVADVRTLPNA_ ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-3|MLH1 48.07275321834293 0.0672159871783604 3 ADKEV{I|L}P 7 7 37.497 0.0 0.0 3.2447 0.0 0.0 200.1119030958584 200.06702600650627 400.1789291023647 0.0 0.0 0.0 0.0 0 2.031718309096375 0.0 0.2887254899964357 0.7059771852360797 ADKEV{I|L}P 3.2447 - 184 + 1 1.447 81300.5 1.0 4169 5258 9416 HBL1_DMSO_200M_050219_1,9429 HBL1_DMSO_200M_050219_1,9429,TVADVRTLPNA True True TVADVRTLPNA 49.364781 578.81944578886 2698475.5 9416.0 ENSG00000076242|ENST00000231790|MLH1;;nc|ENSG00000076242|P40692-3|MLH1 5.061040957768758 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9430 49.367 102.0 696240.0 25 0 69813.0 -1 ISGHCTPPFP 10 67 556.7643604577553 1111.5141679823105 2 556.7648803591728 MULTI CID FTMS 0 0 0 9416 215427.625 0.6022573016343116 -1 0.0951499938964843 14 Carbamidomethyl (C) _ISGHC(Carbamidomethyl (C))TPPFP_ ENSG00000125637|ENST00000245796|PSD4;ENST00000418251.6_1_2:113931616-113943025:+|nuORF;nc|ENSG00000125637|Q8NDX1-2|PSD4 10.073929032068715 0.6785112666868882 3 [YV]PSG{I|L} 6 -1 51.159 0.0 0.0 4.6026 0.0 0.0 0.0 492.1728914850219 492.1728914850219 34.24742501084005 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [YV]PSG{I|L} 4.6026 - 70 + 1 1.447 64236.1 1.0 4170 5258 9416 HBL1_DMSO_200M_050219_1,9430 HBL1_DMSO_200M_050219_1,9430,ISGHCTPPFP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9431 49.379 709.0 273440.0 25 0 20665.0 + 45917 YYVDTAVRHV 10 145 611.8147431046091 1221.614933276018 2 611.8140746951103 MULTI CID FTMS 0 0 0 9416 159646.390625 1.0 0 0.0 15 Unmodified _YYVDTAVRHV_ ENSG00000149273|ENST00000531188|RPS3;nc|ENSG00000149273|P23396-2|RPS3 67.83816525789305 0.0190062514522628 3 YYVDTAVRVH 10 2 + 92.58 0.0 0.0 7.5785 7.5785 82.801 0.0 0.0 0.0 36.53212513775344 1.4976232033333332 1.4976232033333332 1.4976232033333332 0 1.4731975075880328 2.0 0.5941876774005248 0.2887254899964357 YYVDTAVRVH;YYVDTAVRHV;YYVDKKP{M(Oxidation (M))|F}Y;YYV[RK]SP{M(Oxidation (M))|F}Y;YYVV[KG]SP{M(Oxidation (M))|F}Y;YYVHH[RK]GY;YYVDKK[NG]VH;YYVDKKYM{I|L};YYVDKK[NG]HV;YYVDKKV[NG]H 7.5785;7.4559;5.802;4.9834;4.946;4.6422;4.4503;4.3774;4.3277;4.0839 -;+;-;-;-;-;-;-;-;- + 1920 + 1 1.447 141653.2 1.0 4171 5258 9416 HBL1_DMSO_200M_050219_1,9431 HBL1_DMSO_200M_050219_1,9431,YYVDTAVRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9432 49.393 800.0 153970.0 25 0 14473.0 -1 0 80 977.4241885700616 1952.833824206923 2 977.4242431521416 MULTI CID FTMS 0 0 0 9416 170766.84375 0.9203479832026112 1 -0.1542167663574218 16 3 R 1 -1 3.0989 0.0 0.0 0.15869 0.0 0.0 744.2591409299724 1049.4437960260375 1793.70293695601 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.15869 - 18 + 1 1.447 85965.7 0.9100000262260436 4172 5258 9416 HBL1_DMSO_200M_050219_1,9432 HBL1_DMSO_200M_050219_1,9432, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9433 49.408 760.0 303200.0 25 0 24125.0 + -1 NEKCRELDQFY 11 126 751.3390797940704 1500.6636066549406 2 751.3414794802666 MULTI CID FTMS 0 0 0 9416 158475.421875 0.7643437858836274 -1 0.0951499938964843 17 Carbamidomethyl (C) _NEKC(Carbamidomethyl (C))RELDQFY_ REV__ENSG00000105810|ENST00000424848|CDK6 20.41453444215458 0.6105011870913812 3 {[QG]|[NA]}{M(Oxidation (M))|F}[QA]EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 108.42 0.0 0.0 7.225 7.225 83.783 0.0 0.0 0.0 7.367678810494496 63.2428563711855 7.367678810494496 2.768024924119686 0 1.774227503252014 1.0 1.048455006504028 1.274227503252014 {[QG]|[NA]}{M(Oxidation (M))|F}[QA]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[YT][PG]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[QA]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[QA]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[QA]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAMQTWQNA{M(Oxidation (M))|F}Y 7.225;7.0406;6.7246;6.6205;6.6205;6.6205;6.436;6.436;6.436;6.3593 -;-;-;-;-;-;-;-;-;- 7438 1 1.447 164805.7 1.0 4173 5258 9416 HBL1_DMSO_200M_050219_1,9433 HBL1_DMSO_200M_050219_1,9433,NEKCRELDQFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9434 49.417 563.0 205400.0 25 0 11422.0 + 31735 SQQQQVPVV 9 167 506.2771651126911 1010.5397772921822 2 506.7757140994072 MULTI CID FTMS 0 0 0 9416 175960.1875 0.1250191834187054 -8 0.8572158813476562 18 Unmodified _RRSNLTQH_ ENSG00000273173|ENST00000577949|SNURF;ENST00000400100.5_1_15:25165251-25213181:+|nuORF;ENST00000553597.5_1_15:25166388-25213181:+|nuORF 18.13498045792455 0.6430038125133779 3 RRVQSQ[HT] 8 5 + 41.348 0.0 0.0 4.0917 4.0917 79.556 0.0 0.0 0.0 24.67339260679203 0.4009906763229054 0.4009906763229054 7.614393726401687 0 0.0 0.0 0.841129063296272 1.2302046884880935 RRVQSQ[HT];RRVQQS[HT];RRQVSQ[HT];RRV[AG]SQ[HT];RRQSVQ[HT];RRVQS[AG][HT];RRQVQS[HT];RRV[AG]QS[HT];RRVQ[AG]S[HT];RRVQQPPM 4.0917;3.3382;3.2737;3.1751;2.8975;2.6804;2.5202;2.4216;2.4216;2.418 -;-;-;-;-;-;-;-;-;- 1432 + 1 1.447 95688.4 1.0 4174 5258 9416 HBL1_DMSO_200M_050219_1,9434 HBL1_DMSO_200M_050219_1,9434,RRSNLTQH False False SQQQQVPVV 49.417372 506.775714099407 1197513.25 9416.0 ENSG00000273173|ENST00000577949|SNURF;;ENST00000400100.5_1_15:25165251-25213181:+|nuORF;;ENST00000553597.5_1_15:25166388-25213181:+|nuORF 5.531691233317058 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9435 49.431 800.0 281480.0 25 0 33619.0 + 33423 SHNNKMGLL 9 260 338.5116157184623 1012.5130177555868 3 338.5118591189384 MULTI CID FTMS 0 0 0 9416 151356.890625 1.0 0 0.0 19 Unmodified _SHNNKMGLL_ REV__ENSG00000083642|ENST00000315596|PDS5B;REV__nc|ENSG00000083642|Q9NTI5-2|PDS5B 4.189502756095605 0.7684307469601125 3 [C(Carbamidomethyl (C))Q]{I|L}N 4 -1 11.427 0.0 0.0 1.1285 0.0 0.0 0.0 494.2748507135376 494.2748507135376 1.748964981821901 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [C(Carbamidomethyl (C))Q]{I|L}N 1.1285 - 61 + 1 1.447 179386.4 0.9300000071525574 4175 5258 9416 HBL1_DMSO_200M_050219_1,9435 HBL1_DMSO_200M_050219_1,9435,SHNNKMGLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9436 49.442 565.0 513910.0 25 0 279130.0 + 16370 IYQEIRNTDM 10 146 641.8085779492026 1281.602602965205 2 642.3116332888603 MULTI CID FTMS 0 0 0 9416 139939.796875 1.0 0 0.0 20 Unmodified _IYQEIRNTDM_ ENSG00000187735|ENST00000521604|TCEA1;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;nc|ENSG00000187735|P23193-2|TCEA1 40.23920728925047 0.1550410903091231 3 [Y{I|L}]QE{I|L} 5 5 55.635 0.0 0.0 4.341 0.0 0.0 0.0 632.2489357072365 632.2489357072365 42.29761883388149 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.2887254899964357 0.4247425010840047 + [Y{I|L}]QE{I|L} 4.341 + + 1170 + 1 1.447 214182.7 1.0 4176 5258 9416 HBL1_DMSO_200M_050219_1,9436 HBL1_DMSO_200M_050219_1,9436,IYQEIRNTDM False True IYQEIRNTDM 49.442295 641.8106 907757.375 9416.0 nc|ENSG00000187735|P23193-2|TCEA1;;ENSG00000187735|ENST00000521604|TCEA1;;ENST00000521086.6_1_8:54891227-54912595:-|nuORF 5.527353922526042 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9438 49.447 1.6 51770000.0 25 0 5761400.0 + 41514 VPNNKITVV 9 95 492.2978879307647 982.5812229283296 2 492.2982055544853 MULTI CID FTMS 0 0 0 9437 28228476.0 0.5364267692891466 3 -0.2750167846679687 1 Unmodified _VPNNKITVV_ ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 53.832793166522166 0.0319663582346103 3 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 7 3 49.64 0.0 0.0 5.052 0.0 0.0 0.0 213.12404738553087 213.12404738553087 26.45319789925729 0.0 0.0 0.0 0 0.8252574989159953 1.3979400086720375 1.110924374808178 0.5796896906561032 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 5.052 - 371 1 1.462 69602.9 1.0 4177 5259 9437 HBL1_DMSO_200M_050219_1,9438 HBL1_DMSO_200M_050219_1,9438,VPNNKITVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9439 49.45 206.0 389200.0 25 0 18630.0 + 26475 NTLQGISSPL 10 129 515.2825258186245 1028.550498704049 2 515.2828857302666 MULTI CID FTMS 0 0 0 9437 224882.34375 0.0637948531610292 3 -0.2750167846679687 2 Unmodified _NTLQGISSPL_ REV__ENSG00000112851|ENST00000284037|ERBIN;REV__nc|ENSG00000112851|Q96RT1-2|ERBIN;REV__nc|ENSG00000112851|Q96RT1-3|ERBIN;REV__nc|ENSG00000112851|Q96RT1-4|ERBIN;REV__nc|ENSG00000112851|Q96RT1-5|ERBIN;REV__nc|ENSG00000112851|Q96RT1-6|ERBIN;REV__nc|ENSG00000112851|Q96RT1-7|ERBIN;REV__nc|ENSG00000112851|Q96RT1-8|ERBIN;REV__nc|ENSG00000112851|Q96RT1-9|ERBIN 13.042465956692816 0.6287021003332052 3 [TA][PA]{I|L}QT 7 -1 19.174 0.0 0.0 1.8641 0.0 0.0 0.0 343.1640600656303 343.1640600656303 6.409372375139775 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [TA][PA]{I|L}QT 1.8641 - 311 1 1.462 68178.1 1.0 4178 5259 9437 HBL1_DMSO_200M_050219_1,9439 HBL1_DMSO_200M_050219_1,9439,NTLQGISSPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9440 49.452 6.4 7607800.0 25 0 550150.0 + 31848 RTFEKIEEV 9 71 575.8089007506478 1149.6032485680955 2 575.8090698122978 MULTI CID FTMS 0 0 0 9437 6983294.0 1.0 0 0.0 3 Unmodified _RTFEKIEEV_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 40.23920728925047 0.0741434193262949 3 V{M(Oxidation (M))|F}E{I|L}K{[WT]|[RM]}EV 9 5 + 74.447 0.0 0.0 6.4759 6.4759 90.813 0.0 0.0 0.0 16.478174818886373 12.156614721573163 12.156614721573163 12.156614721573163 0 1.174742501084005 0.0 1.424742501084005 0.7059771852360797 V{M(Oxidation (M))|F}E{I|L}K{[WT]|[RM]}EV;{[QN]|[E{I|L}]|[KN]}[YQ]K{I|L}EEV;V{M(Oxidation (M))|F}{[WT]|[RM]}K{I|L}EEV 6.4759;5.4184;3.9439 -;-;- 108 + 1 1.462 41828.5 1.0 4179 5259 9437 HBL1_DMSO_200M_050219_1,9440 HBL1_DMSO_200M_050219_1,9440,RTFEKIEEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9441 49.453 13.0 3425300.0 25 0 624540.0 + 43615 YAGVVLSW 8 61 447.7376341103164 893.4607152874329 2 447.7376891970634 MULTI CID FTMS 0 0 0 9437 3563560.25 1.0 0 0.0 4 Unmodified _YAGVVLSW_ REV__ENSG00000172377|ENST00000641439|OR9I1 19.438996006549623 0.6237395211498085 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L} 4 -1 45.445 0.0 0.0 5.0864 0.0 0.0 0.0 486.2316419869352 486.2316419869352 35.35666875892183 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L} 5.0864 - 70 + 1 1.462 40131.2 1.0 4180 5259 9437 HBL1_DMSO_200M_050219_1,9441 HBL1_DMSO_200M_050219_1,9441,YAGVVLSW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9442 49.454 18.0 2482100.0 25 0 149970.0 + -1 MVERTLMRV 9 77 384.2083421699769 1149.6031971101306 3 384.2082702517509 MULTI CID FTMS 0 0 0 9437 2557930.0 1.0 0 0.0 5 Oxidation (M) _M(Oxidation (M))VERTLMRV_ REV__ENSG00000124571|ENST00000265351|XPO5;REV__ENST00000450462.6_1_6:43495291-43496568:-|nuORF 16.149105407346934 0.3995459350917656 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}EKEE[{I|L}V] 9 -1 + 41.132 0.0 0.0 3.5779 3.5779 75.404 0.0 0.0 0.0 3.1234684152074976 25.647124887093824 3.1234684152074976 4.771212547196619 0 0.0 0.0 0.9247425010840048 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}EKEE[{I|L}V];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}TREE[{I|L}V];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{M(Oxidation (M))|F}KEE[{I|L}V];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}T[VG]EE[{I|L}V];[{I|L}T][YQ]REE[{I|L}V];{[HG]|PP}[W{I|L}][PA]EE[{I|L}V];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QQ{M(Oxidation (M))|F}[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}[HK][PA]EE[{I|L}V] 3.5779;3.1629;2.9699;2.3619;1.0081;0.73083;0.29249;0.20712 -;-;-;-;-;-;-;- 308 1 1.462 45549.4 1.0 4181 5259 9437 HBL1_DMSO_200M_050219_1,9442 HBL1_DMSO_200M_050219_1,9442,MVERTLMRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9443 49.455 22.0 1945700.0 25 0 329510.0 + 13976 HYVGSAAAF 9 66 461.7243298183436 921.4341067034871 2 461.7244445681572 MULTI CID FTMS 0 0 0 9437 1806132.625 1.0 0 0.0 6 Unmodified _HYVGSAAAF_ ENSG00000132522|ENST00000380728|GPS2;nc|ENSG00000132522|Q13227-2|GPS2 53.57557251787612 0.0325303259649373 3 {[WN]|[YH]}V[SG]AAA{M(Oxidation (M))|F} 9 0 + 55.581 0.0 0.0 6.032 6.032 86.526 0.0 0.0 0.0 21.139305113795643 32.11303739409743 21.139305113795643 8.46787486224656 0 1.274227503252014 1.5228787452803376 0.9247425010840048 0.0 + + {[WN]|[YH]}V[SG]AAA{M(Oxidation (M))|F};{[WN]|[YH]}V{[QS]|[NT]}AA{M(Oxidation (M))|F};[YT]{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}T]{M(Oxidation (M))|F};[YT]{[YD]|[{M(Oxidation (M))|F}M]}[YV]V 6.032;5.113;2.2469;0.97048 +;-;-;- + 85 1 1.462 38316.9 1.0 4182 5259 9437 HBL1_DMSO_200M_050219_1,9443 HBL1_DMSO_200M_050219_1,9443,HYVGSAAAF True True HYVGSAAAF 49.455172 461.7251 14068763.0 9437.0 nc|ENSG00000132522|Q13227-2|GPS2;;ENSG00000132522|ENST00000380728|GPS2 7.219391981760661 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9444 49.457 93.0 1547300.0 25 0 281610.0 -1 0 87 966.4326234561798 1930.85069397916 2 966.4340087771416 MULTI CID FTMS 0 0 0 9437 1305413.0 0.686878896837384 -3 0.3598136901855469 7 3 {I|L}TNQ 4 -1 28.162 0.0 0.0 1.4585 0.0 0.0 1117.428658472443 354.16718469791255 1471.5958431703557 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 1.316901560044258 {I|L}TNQ 1.4585 - 971 + 1 1.462 100973.8 1.0 4183 5259 9437 HBL1_DMSO_200M_050219_1,9444 HBL1_DMSO_200M_050219_1,9444, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9445 49.46 116.0 428990.0 25 0 45407.0 + 13970 HYTQKSLSL 9 86 538.7909548903916 1075.5673568475831 2 538.7905761599541 MULTI CID FTMS 0 0 0 9437 538004.875 1.0 0 0.0 8 Unmodified _HYTQKSLSL_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1 28.49450938151212 0.1686335738423394 3 {[WN]|[YH]}[QT]K{[WT]|[RM]}{I|L} 8 3 + 40.285 0.0 0.0 3.7455 3.7455 81.569 0.0 0.0 0.0 0.7325708726451552 16.77296807956033 0.7325708726451552 10.044321917401078 0 0.9650302283996908 1.6989700043360187 0.0 0.0 {[WN]|[YH]}[QT]K{[WT]|[RM]}{I|L};{[WN]|[YH]}[KT]Q{[WT]|[RM]}{I|L};[QT]{[WN]|[YH]}K{[WT]|[RM]}{I|L};[QT][KT]AQ{[WT]|[RM]}{I|L} 3.7455;2.8116;1.1412;0.15982 -;-;-;- 89 1 1.462 42906.1 1.0 4184 5259 9437 HBL1_DMSO_200M_050219_1,9445 HBL1_DMSO_200M_050219_1,9445,HYTQKSLSL False True HYTQKSLSL 49.459684 538.790576159954 3897394.75 9437.0 nc|ENSG00000211896|P01857|IGHG1;;nc|ENSG00000211892|P01861-1|IGHG4;;nc|ENSG00000211893|P01859|IGHG2;;nc|ENSG00000211893|P01859-1|IGHG2;;nc|ENSG00000211892|P01861|IGHG4;;nc|ENSG00000211896|P01857-1|IGHG1 5.364736398061116 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 9446 49.463 160.0 600780.0 25 0 35628.0 + + 39834 RVNKAFVNV 9 120 523.809150518298 1045.603748103396 2 523.8093139529228 MULTI CID FTMS 0 0 0 9437 493417.0 0.6572575445186648 -3 0.3598136901855469 9 Unmodified _VFAKNVRNV_ ENSG00000176731|ENST00000619594|RBIS 30.22481116460888 0.1466181017706357 3 VDV{M(Oxidation (M))|F}[RV]VN 8 -1 42.273 0.0 0.0 4.0429 0.0 0.0 0.0 114.05652033023672 114.05652033023672 24.52963856743651 0.0 0.0 0.0 0 1.242992819099939 0.9208187539523752 0.0 1.8494850021680087 VDV{M(Oxidation (M))|F}[RV]VN 4.0429 - 602 + 1 1.462 81850.4 1.0 4185 5259 9437 HBL1_DMSO_200M_050219_1,9446 HBL1_DMSO_200M_050219_1,9446,VFAKNVRNV False False RVNKAFVNV 49.462855 523.809313952923 6953174.5 9437.0 ENSG00000176731|ENST00000619594|RBIS 3.8039124806722007 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9447 49.466 167.0 406590.0 25 0 24270.0 + 10479 FTPNNIKQV 9 100 530.7927022163086 1059.5708514994171 2 530.7930786013603 MULTI CID FTMS 0 0 0 9437 398690.0 1.0 0 0.0 10 Unmodified _FTPNNIKQV_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62496043-62497015:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5 54.773552608820026 0.0299037012502309 3 [{M(Oxidation (M))|F}T]PNN{I|L}KQV 9 0 + 38.533 0.0 0.0 3.6366 3.6366 80.705 0.0 0.0 0.0 10.010417088811357 7.290325063701758 7.290325063701758 9.208187539523756 0 0.4247425010840047 0.0 0.0 1.079689690656103 + + [{M(Oxidation (M))|F}T]PNN{I|L}KQV;[{M(Oxidation (M))|F}T]PGGN{I|L}KQV;[{M(Oxidation (M))|F}T]PNGG{I|L}KQV;{[QV]|[N{I|L}]|[RA]|[KV]}R{M(Oxidation (M))|F}[{I|L}A]PET;[{M(Oxidation (M))|F}T]PNN{I|L}K[AG]V;[{M(Oxidation (M))|F}T]PGGGG{I|L}KQV;{[QV]|[N{I|L}]|[RA]|[KV]}[VG]{M(Oxidation (M))|F}[{I|L}A]PET;[NP]N{I|L}KVV[YN];[{M(Oxidation (M))|F}T]PNGG{I|L}K[AG]V;[{M(Oxidation (M))|F}T]PGGN{I|L}K[AG]V 3.6366;2.7676;2.7676;2.693;2.4793;1.9026;1.824;1.7214;1.6144;1.6144 +;-;-;-;-;-;-;-;-;- + 289 + 1 1.462 57759.0 1.0 4186 5259 9437 HBL1_DMSO_200M_050219_1,9447 HBL1_DMSO_200M_050219_1,9447,FTPNNIKQV True True FTPNNIKQV 49.46614 530.79307860136 3107579.0 9437.0 ENST00000581230.5_1_17:62496043-62497015:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5 6.885202407836914 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9448 49.469 157.0 493490.0 25 0 57498.0 -1 KPHACRWCERR 11 50 778.3790603227214 1554.7435677122428 2 778.8804199099541 MULTI CID FTMS 0 0 0 9437 374962.03125 0.4871973102036269 -2 0.2493667602539062 11 2 Carbamidomethyl (C) _KPHAC(Carbamidomethyl (C))RWC(Carbamidomethyl (C))ERR_ ENSG00000179627|ENST00000342537|ZBTB42 2.735195868890462 0.8622431031272658 3 [RP]HAGEPYWA{[ES]|[DT]|[{I|L}C]}R 13 -1 + 61.173 0.0 0.0 3.9346 3.9346 52.352 0.0 0.0 0.0 45.688232188941846 5.243593458594447 5.243593458594447 0.0 0 0.8182503180159344 0.0 0.0 0.3494850021680094 [RP]HAGEPYWA{[ES]|[DT]|[{I|L}C]}R;[RP]HAGEPYC(Carbamidomethyl (C))A{[QN]|[E{I|L}]|[KN]}R;[RP]HAGEPYEGA{[ES]|[DT]|[{I|L}C]}R;[RP]HAGEPYW{[WT]|[RM]}R;[RP]HAWPYEGA{[ES]|[DT]|[{I|L}C]}R;[RP]HAGEPYEG{[WT]|[RM]}R;[RP]HAGEPYEQ{[ES]|[DT]|[{I|L}C]}R;[RP]HAGE[C(Carbamidomethyl (C))K]TGA{[ES]|[DT]|[{I|L}C]}R;[RP]HAWPYEQ{[ES]|[DT]|[{I|L}C]}R;[RP]HAWPYEG{[WT]|[RM]}R 3.9346;3.9346;3.8966;3.829;3.7894;3.7894;3.7894;3.7715;3.6838;3.6838 -;-;-;-;-;-;-;-;-;- 455 + 1 1.462 59031.4 1.0 4187 5259 9437 HBL1_DMSO_200M_050219_1,9448 HBL1_DMSO_200M_050219_1,9448,KPHACRWCERR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9449 49.477 461.0 413960.0 25 0 27396.0 + 39176 TYPSQAPVY 9 173 513.250473205628 1024.486393478056 2 513.2503539919853 MULTI CID FTMS 0 0 0 9437 366603.75 1.0 0 0.0 12 Unmodified _TYPSQAPVY_ ENSG00000136738|ENST00000377524|STAM 34.10243960390752 0.1078313939113124 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]APVY 8 4 + 31.49 0.0 0.0 3.0738 3.0738 73.319 0.0 0.0 0.0 -2.416539169921464 1.1230868492753745 -2.416539169921464 3.808325356648119 0 0.8807196863200843 0.8860566476931632 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]APVY;[PS]QAPV[NP]{[ES]|[DT]|[{I|L}C]};[YT]{I|L}A[WR]{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]A{I|L}{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]APYV;{[QG]|[NA]}[TP]PV[NP]{[ES]|[DT]|[{I|L}C]};{[QS]|[NT]}PAPV[NP]{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]AR[{I|L}T]Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NP]VP[HD]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]AVG[{I|L}T]Y 3.0738;2.702;2.702;1.8811;1.8038;1.7773;1.768;1.5054;1.3479;1.3181 -;-;-;-;-;-;-;-;-;- 1412 + 1 1.462 153454.9 1.0 4188 5259 9437 HBL1_DMSO_200M_050219_1,9449 HBL1_DMSO_200M_050219_1,9449,TYPSQAPVY True True TYPSQAPVY 49.477438 513.250353991985 5208276.5 9437.0 ENSG00000136738|ENST00000377524|STAM 5.452228705088298 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9450 49.48 150.0 490560.0 25 0 61017.0 + 9689 FLRLIHFQL 9 78 396.2399087074488 1185.6978967225464 3 396.2398864626884 MULTI CID FTMS 0 0 0 9437 349955.34375 0.5456013849909682 -3 0.3598136901855469 13 Unmodified _FLRLIHFQL_ REV__ENSG00000173572|ENST00000342929|NLRP13 11.494710602746466 0.5255349189887087 3 {I|L}E 2 -1 20.969 0.0 0.0 1.7685 0.0 0.0 925.5474125188216 0.0 925.5474125188216 0.0 3.6227313277985473 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E 1.7685 - 16 1 1.462 63747.2 1.0 4189 5259 9437 HBL1_DMSO_200M_050219_1,9450 HBL1_DMSO_200M_050219_1,9450,FLRLIHFQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9451 49.49 528.0 193330.0 25 0 20731.0 -1 ECKECRKCFY 10 128 711.8019095013437 1421.5892660694874 2 711.8068115115166 MULTI CID FTMS 0 0 0 9437 300335.3125 0.1827045504387465 2 -0.201873779296875 14 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KECRKC(Carbamidomethyl (C))FY_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 17.11289562659939 0.5604042439455784 3 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}Y 12 -1 + 111.3 0.0 0.0 7.8292 7.8292 86.975 0.0 0.0 0.0 3.703715150305285 16.611814434466183 3.703715150305285 3.703715150305285 0 1.0 0.0 2.030369551124698 1.319341519366547 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}Y;[QA]DHEAQQDA{M(Oxidation (M))|F}Y;{[QG]|[NA]}EHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQDQA{M(Oxidation (M))|F}Y;[QA]HDEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEA[AG]QDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQ[AG]DA{M(Oxidation (M))|F}Y;[YE][C(Carbamidomethyl (C))K]AQQDA{M(Oxidation (M))|F}Y;[QA]DHEAQDQA{M(Oxidation (M))|F}Y 7.8292;7.5687;7.513;7.3972;7.3877;7.2777;7.1892;7.1892;7.1679;7.1272 -;-;-;-;-;-;-;-;-;- 7213 1 1.462 77007.2 1.0 4190 5259 9437 HBL1_DMSO_200M_050219_1,9451 HBL1_DMSO_200M_050219_1,9451,ECKECRKCFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9452 49.499 521.0 369180.0 25 0 17422.0 + + -1 MPQNRTIYV 9 182 569.2492089253421 1136.4838649174842 2 569.2498657107353 MULTI CID FTMS 0 0 0 9437 256148.09375 0.7186697531492012 -3 0.3598136901855469 15 Carbamidomethyl (C) _VGVEQMVC(Carbamidomethyl (C))SE_ ENSG00000166801|ENST00000675163|FAM111A 17.11289562659939 0.5604042439455784 3 [QP]SVT{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{[{M(Oxidation (M))|F}D]|MM} 10 -1 + 47.628 0.0 0.0 4.1909 4.1909 77.927 0.0 0.0 0.0 5.465426634781316 1.856734291156954 1.856734291156954 5.465426634781316 0 0.0 0.9208187539523752 1.3494850021680094 0.4802046884880938 [QP]SVT{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{[{M(Oxidation (M))|F}D]|MM};[AG]PSVT{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{[{M(Oxidation (M))|F}D]|MM};[QP]SVTE[VS][C(Carbamidomethyl (C))M];[PA]GSVT{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{[{M(Oxidation (M))|F}D]|MM};[QP][PA]T{M(Oxidation (M))|F}[KS]{[{M(Oxidation (M))|F}D]|MM};[AG]PSVTE[VS][C(Carbamidomethyl (C))M];[QP][PA]T{M(Oxidation (M))|F}W[C(Carbamidomethyl (C))M];[AG]P[PA]T{M(Oxidation (M))|F}[KS]{[{M(Oxidation (M))|F}D]|MM};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VT{M(Oxidation (M))|F}[KS]{[{M(Oxidation (M))|F}D]|MM};[AG]SPVT{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{[{M(Oxidation (M))|F}D]|MM} 4.1909;3.71;3.2621;3.0703;2.8941;2.7812;2.6045;2.4132;2.3644;2.3513 -;-;-;-;-;-;-;-;-;- 1827 1 1.462 145275.2 1.0 4191 5259 9437 HBL1_DMSO_200M_050219_1,9452 HBL1_DMSO_200M_050219_1,9452,VGVEQMVCSE False False MPQNRTIYV 49.498894 569.249865710735 1293399.75 9437.0 ENSG00000166801|ENST00000675163|FAM111A 4.981875816980998 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9453 49.503 191.0 796490.0 25 0 100680.0 + 18154 KTQDLFRRV 9 117 388.2281263755597 0 388.2282592654228 PEAK CID FTMS 0 0 0 9437 259069.734375 0.7023138604674332 -1 0.1542167663574218 16 Unmodified _KTQDLFRRV_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 17.44264345198275 0.2268971914127055 3 V 1 8 6.9897 0.0 0.0 0.90255 0.0 0.0 85.0075141450862 587.3429270411143 672.3504411862006 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.90255 + + 20 + 1 1.462 125140.1 1.0 4192 5259 9437 HBL1_DMSO_200M_050219_1,9453 HBL1_DMSO_200M_050219_1,9453,KTQDLFRRV False True KTQDLFRRV 49.502557 388.228259265423 3317396.5 9437.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 3.9679541985193887 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9454 49.513 604.0 344370.0 25 0 26464.0 44199 YLFYCKNCRFY 11 118 760.3440998647814 1518.6736467963626 2 760.3459350466728 MULTI CID FTMS 0 0 0 9437 210730.90625 0.9443900090337184 -3 0.3598136901855469 17 Unmodified _YLFYCKNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 3 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F}Y 14 12 + 89.637 0.0 0.0 5.9024 5.9024 84.931 0.0 0.0 0.0 6.800818961849416 10.311894545657196 6.800818961849416 6.800818961849416 0 0.7742275032520141 0.9208187539523752 0.3054621874040891 1.9489700043360187 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{[WS]|[C(Carbamidomethyl (C)){I|L}]}YQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQQGGA{M(Oxidation (M))|F}Y 5.9024;5.4545;5.3064;5.3064;5.3064;5.2491;4.948;4.8571;4.8571;4.8571 -;-;-;-;-;-;-;-;-;- 3413 1 1.462 148808.2 1.0 4193 5259 9437 HBL1_DMSO_200M_050219_1,9454 HBL1_DMSO_200M_050219_1,9454,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9455 49.517 109.0 437480.0 25 0 28735.0 + 36840 TELLEEET 8 100 482.2282297947099 962.4419066562198 2 482.2263671755791 MULTI CID FTMS 0 0 0 9437 145987.640625 0.579952118863503 3 -0.2750167846679687 18 Unmodified _TELLEEET_ REV__ENSG00000198848|ENST00000360526|CES1;REV__ENST00000421606.6_2_16:55801397-55827869:+|nuORF;REV__nc|ENSG00000198848|P23141-3|CES1;REV__nc|ENSG00000198848|P23141|CES1 19.438996006549623 0.6237395211498085 3 ET 2 -1 25.886 0.0 0.0 2.6896 0.0 0.0 714.3406473562183 0.0 714.3406473562183 0.0 3.6715972005808304 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 ET 2.6896 + + 169 + 1 1.462 43467.1 1.0 4194 5259 9437 HBL1_DMSO_200M_050219_1,9455 HBL1_DMSO_200M_050219_1,9455,TELLEEET False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9456 49.53 800.0 52409.0 25 0 4526.5 -1 0 40 1165.464711500263 3493.37230510099 3 1166.127612292767 MULTI CID FTMS 0 0 0 9437 144485.234375 1.0 0 0.0 19 3 W 1 -1 6.9897 0.0 0.0 0.20008 0.0 0.0 2327.801578637903 976.447397100256 3304.248975738159 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.20008 - 4 + 1 1.462 37513.6 0.699999988079071 4195 5259 9437 HBL1_DMSO_200M_050219_1,9456 HBL1_DMSO_200M_050219_1,9456, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9457 49.535 225.0 298220.0 25 0 27852.0 + -1 TTLNMLCSL 9 109 534.7560618958298 1067.4975708584595 2 534.7560912966728 MULTI CID FTMS 0 0 0 9437 132787.4375 0.2803806189148397 2 -0.201873779296875 20 Carbamidomethyl (C),Oxidation (M) _TTLNM(Oxidation (M))LC(Carbamidomethyl (C))SL_ REV__ENSG00000119535|ENST00000373106|CSF3R;REV__ENST00000464365.2_1_1:36934562-36941005:-|nuORF;REV__nc|ENSG00000119535|Q99062-2|CSF3R;REV__nc|ENSG00000119535|Q99062-3|CSF3R;REV__nc|ENSG00000119535|Q99062-4|CSF3R 15.847184025352805 0.4077185912009129 3 YP[C(Carbamidomethyl (C))N]A{M(Oxidation (M))|F}{I|L}[PS] 9 -1 + 38.06 0.0 0.0 3.5654 3.5654 69.306 0.0 0.0 0.0 11.174771601701188 4.2327121632892855 4.2327121632892855 0.7378621416091917 0 0.0 1.2218487496163564 0.7302046884880937 0.0 YP[C(Carbamidomethyl (C))N]A{M(Oxidation (M))|F}{I|L}[PS];YP[NS]GS{M(Oxidation (M))|F}{I|L}[PS];YPEES{M(Oxidation (M))|F}{I|L}[PS];YP[C(Carbamidomethyl (C))N]A{M(Oxidation (M))|F}T[VP];YP[NS]GS{M(Oxidation (M))|F}T[VP];YPEES{M(Oxidation (M))|F}T[VP];YP[NS]QY{I|L}[PS];YP[C(Carbamidomethyl (C))N]A{M(Oxidation (M))|F}[PS]{I|L};YP[NS]GS{M(Oxidation (M))|F}[PS]{I|L};YPHHP[TA][{M(Oxidation (M))|F}V] 3.5654;3.4963;3.4483;2.7152;2.6461;2.5982;2.4608;2.4007;2.3316;2.2886 -;-;-;-;-;-;-;-;-;- 1046 + 1 1.462 57917.5 1.0 4196 5259 9437 HBL1_DMSO_200M_050219_1,9457 HBL1_DMSO_200M_050219_1,9457,TTLNMLCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9459 49.539 11.0 3242000.0 25 0 238900.0 + 13022 HASQPSLTV 9 60 470.2484443846493 938.4823358360984 2 470.2487060427666 MULTI CID FTMS 0 0 0 9458 4150164.0 0.2934172704519486 5 -0.4809112548828125 1 Unmodified _HASQPSLTV_ ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000175387|Q15796-2|SMAD2 37.97399986684836 0.0865783450051559 3 [HA]{[QS]|[NT]}[PS]{I|L}TV 9 0 + 31.422 0.0 0.0 3.3482 3.3482 70.962 0.0 0.0 0.0 5.118926768029041 8.969975784476162 5.118926768029041 1.989700043360188 0 0.6822333069283655 1.0969100130080565 0.9247425010840048 0.0 + + [HA]{[QS]|[NT]}[PS]{I|L}TV;[HA]{[QS]|[NT]}V[TP]TV;{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}TV 3.3482;3.1361;2.8027 +;-;- + 55 1 1.472 30857.0 1.0 4197 5260 9458 HBL1_DMSO_200M_050219_1,9459 HBL1_DMSO_200M_050219_1,9459,HASQPSLTV True True HASQPSLTV 49.539148 470.248706042767 1131131040.0 9458.0 nc|ENSG00000175387|Q15796-2|SMAD2;;ENSG00000175387|ENST00000262160|SMAD2 7.683013439178467 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9460 49.54 23.0 1403800.0 25 0 98247.0 + 36479 TADASTYSSVT 11 72 368.1686414534291 1101.4840949604873 3 368.1686279177666 MULTI CID FTMS 0 0 0 9458 1584469.875 0.2788687437811044 2 -0.1823883056640625 2 Unmodified _TADASTYSSVT_ REV__ENSG00000034971|ENST00000037502|MYOC 12.240655878213236 0.7805268987462184 3 [TA]D[RH]YD[QP] 9 -1 + 40.982 0.0 0.0 3.7206 3.7206 83.767 0.0 0.0 0.0 12.063631030611578 17.068467280054577 12.063631030611578 24.960762528683706 0 0.2887254899964357 1.6989700043360187 0.2742275032520141 0.0 [TA]D[RH]YD[QP];{[DA]|[EG]}T[RH]YD[QP];{[ET]|[MV]}G[RH]YD[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}DY[DP][HN]V;{[YD]|[{M(Oxidation (M))|F}M]}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ][QP] 3.7206;1.4545;1.351;1.1436;0.21882 -;-;-;-;- 93 1 1.472 33521.0 1.0 4198 5260 9458 HBL1_DMSO_200M_050219_1,9460 HBL1_DMSO_200M_050219_1,9460,TADASTYSSVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9461 49.542 25.0 1563400.0 25 0 144200.0 + 3659 DAEMTTRMV 9 62 527.238406153333 1052.462259373466 2 527.2390014529228 MULTI CID FTMS 0 0 0 9458 1982129.125 0.0243054862394293 4 -0.3915634155273437 3 Unmodified _DAEMTTRMV_ ENSG00000205220|ENST00000358514|PSMB10 45.69961567697781 0.0497987121815769 3 {[DA]|[EG]}EMTTRMV 9 0 + 81.943 0.0 0.0 7.7858 7.7858 96.174 0.0 0.0 0.0 58.7550232166252 8.44985424090244 8.44985424090244 26.46591250700361 0 0.9247425010840048 2.0 0.8494850021680094 0.0 + + {[DA]|[EG]}EMTTRMV;{[DA]|[EG]}E[W{M(Oxidation (M))|F}]RMV;{[DA]|[EG]}{M(Oxidation (M))|F}[DV]TRMV;{[DA]|[EG]}{M(Oxidation (M))|F}[WE]RMV;{[DA]|[EG]}E[{M(Oxidation (M))|F}T]WWV;[{M(Oxidation (M))|F}T]RTTM[C(Carbamidomethyl (C))H];WE{[QS]|[NT]}HHMV;{[DA]|[EG]}{M(Oxidation (M))|F}{[ET]|[MV]}WWV;[{M(Oxidation (M))|F}T]RT[DV]EW;{[CT]|[{M(Oxidation (M))|F}G]}E[DV]TRMV 7.7858;5.2711;5.1256;4.51;4.0118;3.9567;3.4884;2.8471;2.506;2.1321 +;-;-;-;-;-;-;-;-;- + 143 + 1 1.472 36786.5 1.0 4199 5260 9458 HBL1_DMSO_200M_050219_1,9461 HBL1_DMSO_200M_050219_1,9461,DAEMTTRMV True True DAEMTTRMV 49.541506 527.239001452923 1696777728.0 9458.0 ENSG00000205220|ENST00000358514|PSMB10 7.224809646606445 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9462 49.543 20.0 1990300.0 25 0 144800.0 + 16843 KIDEHHFVAV 10 63 398.8804068391868 1193.6193911177604 3 398.8802673220634 MULTI CID FTMS 0 0 0 9458 1888767.375 0.3415477717637392 1 -0.1092453002929687 4 Unmodified _KIDEHHFVAV_ ENSG00000149313|ENST00000278618|AASDHPPT 13.614867670302877 0.6190977555336379 3 H{M(Oxidation (M))|F}VAV 5 5 28.143 0.0 0.0 2.3578 0.0 0.0 622.3072556352977 0.0 622.3072556352977 0.0 11.15356566548286 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.0 + H{M(Oxidation (M))|F}VAV 2.3578 + + 37 1 1.472 38556.2 1.0 4200 5260 9458 HBL1_DMSO_200M_050219_1,9462 HBL1_DMSO_200M_050219_1,9462,KIDEHHFVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9463 49.544 24.0 1487000.0 25 0 146190.0 + 24968 MPPPPPQGV 9 68 460.2385793050109 918.462605676822 2 460.2390014529228 MULTI CID FTMS 0 0 0 9458 1903046.75 0.0632169869271944 37 -3.32974624633789 5 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 3 P[{M(Oxidation (M))|F}T]GV 5 6 22.531 0.0 0.0 2.4531 0.0 0.0 399.21042070121456 0.0 399.21042070121456 0.0 8.093859345357188 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 P[{M(Oxidation (M))|F}T]GV 2.4531 - 93 + 1 1.472 33280.3 1.0 4201 5260 9458 HBL1_DMSO_200M_050219_1,9463 HBL1_DMSO_200M_050219_1,9463,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9464 49.545 39.0 1221800.0 25 0 144460.0 + 3586 DAAISKVQV 9 69 465.7663992147045 929.518245496209 2 465.7664367556572 MULTI CID FTMS 0 0 0 9458 1507295.25 0.3304999482530129 1 -0.1092453002929687 6 Unmodified _DAAISKVQV_ ENSG00000127481|ENST00000375254|UBR4;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4 38.17557092003332 0.0854718145212029 3 {[DA]|[EG]}A{I|L}SKVQV 9 0 + 58.326 0.0 0.0 6.2748 6.2748 90.122 0.0 0.0 0.0 27.37002527416834 11.95046257204389 11.95046257204389 11.95046257204389 0 1.0 1.6989700043360187 0.0 0.2742275032520141 + + {[DA]|[EG]}A{I|L}SKVQV;{[DA]|[EG]}A{I|L}SKV[AG]V 6.2748;4.9892 +;- + 126 + 1 1.472 42642.1 1.0 4202 5260 9458 HBL1_DMSO_200M_050219_1,9464 HBL1_DMSO_200M_050219_1,9464,DAAISKVQV True True DAAISKVQV 49.545042 465.766436755657 55926000.0 9458.0 ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4 5.9579745928446455 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9465 49.546 45.0 740270.0 25 0 69833.0 + -1 TAADFCIFGT 10 59 551.7486917740848 1101.4828306149695 2 551.7493163943291 MULTI CID FTMS 0 0 0 9458 948430.875 0.2019963152420043 2 -0.1823883056640625 7 Carbamidomethyl (C) _TAADFC(Carbamidomethyl (C))IFGT_ REV__ENSG00000147481|ENST00000642720|SNTG1;REV__ENST00000524004.5_3_8:51571197-51621559:+|nuORF;REV__nc|ENSG00000147481|Q9NSN8-2|SNTG1 13.90604991867851 0.6142120002215601 3 [TA]ADY{I|L} 6 -1 52.664 0.0 0.0 4.7812 0.0 0.0 0.0 464.16474329166255 464.16474329166255 35.172655519383085 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [TA]ADY{I|L} 4.7812 - 57 + 1 1.472 34728.7 1.0 4203 5260 9458 HBL1_DMSO_200M_050219_1,9465 HBL1_DMSO_200M_050219_1,9465,TAADFCIFGT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9466 49.548 68.0 1193300.0 25 0 159330.0 31857 RTHHRWYLCHF 11 83 519.2554512411521 1554.7445243236562 3 519.2552978396416 MULTI CID FTMS 0 0 0 9458 884679.5625 0.7903889295642397 -1 0.0926284790039062 8 Unmodified _RTHHRWYLCHF_ ENSG00000136867|ENST00000259392|SLC31A2 2.6312355333042263 0.8627335947654684 3 [HV][PG]AGEYGAEA{I|L}ER 15 14 [HV][PG]AGE + + 57.817 5.2378 0.80918 3.7187 3.7187 51.76 0.0 0.0 0.0 0.0 50.94016492360683 0.0 0.0 0 1.8807196863200843 0.0 0.3807196863200844 0.2742275032520141 [HV][PG]AGEYGAEA{I|L}ER 3.7187 - 701 + 1 1.472 65619.4 1.0 4204 5260 9458 HBL1_DMSO_200M_050219_1,9466 HBL1_DMSO_200M_050219_1,9466,RTHHRWYLCHF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9467 49.551 138.0 451190.0 25 0 99218.0 + 45801 YYLVKREDY 9 78 416.88028475997794 1247.6190248801338 3 416.8799926638603 MULTI CID FTMS 0 0 0 9458 449819.5 0.2982813509046235 1 -0.1092453002929687 9 Unmodified _YYLVKREDY_ ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 24.881564428377168 0.2146028316269493 3 YY{I|L}VK 5 4 62.251 0.0 0.0 4.9895 0.0 0.0 0.0 578.2214449518186 578.2214449518186 48.75569708000178 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.3494850021680094 + YY{I|L}VK 4.9895 + + 99 + 1 1.472 58083.6 1.0 4205 5260 9458 HBL1_DMSO_200M_050219_1,9467 HBL1_DMSO_200M_050219_1,9467,YYLVKREDY False True YYLVKREDY 49.550669 416.87999266386 45628606.0 9458.0 ENSG00000151366|ENST00000281031|NDUFC2;;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 6.1815505027771 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9468 49.555 212.0 419870.0 25 0 43033.0 + 18285 KVIGGFAGT 9 112 425.2451508110648 848.4757486889296 2 425.2452270388603 MULTI CID FTMS 0 0 0 9458 384511.0625 0.353689132524172 2 -0.1823883056640625 10 Unmodified _KVIGGFAGT_ ENSG00000165948|ENST00000555523|IFI27L1 24.020572477871973 0.2255576514309169 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}AGT 8 2 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}A + + 24.112 10.095 1.5014 2.8418 2.8418 49.891 0.0 0.0 0.0 0.0 8.532348923842264 0.0 0.0 0 0.4247425010840047 0.0 0.7302046884880938 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}AGT 2.8418 - 416 + 1 1.472 74159.2 1.0 4206 5260 9458 HBL1_DMSO_200M_050219_1,9468 HBL1_DMSO_200M_050219_1,9468,KVIGGFAGT False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9469 49.566 677.0 295990.0 25 0 26786.0 + 45803 YYLVKREDY 9 129 624.8167768557602 1247.6190007783202 2 624.8169433474541 MULTI CID FTMS 0 0 0 9458 234156.015625 0.1847902297093071 2 -0.1823883056640625 11 Unmodified _YYLVKREDY_ ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 61.08992128646608 0.0254786290039527 3 YY{I|L}VK{[RE]|[WV]}DY 9 0 + 97.783 0.0 0.0 7.8376 7.8376 96.335 0.0 0.0 0.0 72.34977568466924 15.619156941093166 15.619156941093166 27.30082161704693 0 1.3494850021680094 2.0 0.8494850021680094 1.360924374808178 + + YY{I|L}VK{[RE]|[WV]}DY;YY{I|L}VYWWR;YY{I|L}VC[{I|L}V]{[NV]|[RG]}Y;YY{I|L}YVWWR;YY{I|L}{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}[WP]R;YY{I|L}VC[{I|L}V][YN]V;YYY{I|L}VWWR;{[QV]|[N{I|L}]|[RA]|[KV]}[WD]V{I|L}YYY;Y[RH]V[RD]{M(Oxidation (M))|F}QQ 7.8376;5.6493;5.4499;5.0062;4.7034;4.6835;3.8427;2.1111;0.13192 +;-;-;-;-;-;-;-;- + 653 + 1 1.472 148952.9 1.0 4207 5260 9458 HBL1_DMSO_200M_050219_1,9469 HBL1_DMSO_200M_050219_1,9469,YYLVKREDY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9470 49.579 742.0 308150.0 25 0 11496.0 + 38670 TTLDEKIEKV 10 222 588.329921750796 1174.6452905683918 2 588.3295776247978 MULTI CID FTMS 0 0 0 9458 170099.984375 0.7751303632341645 -2 0.2468452453613281 12 Unmodified _TTLDEKIEKV_ ENSG00000124228|ENST00000618172|DDX27;ENST00000484427.5_1_20:47835892-47850293:+|nuORF;nc|ENSG00000124228|Q96GQ7|DDX27 68.75988807550267 0.0189765623365881 3 TT{I|L}DEK{I|L}EVK 10 2 + 87.533 0.0 0.0 7.4519 7.4519 81.846 0.0 0.0 0.0 33.521825181113634 1.0916754226012273 1.0916754226012273 1.0916754226012273 0 1.774227503252014 1.6989700043360187 0.899649864804614 0.9049471895720984 TT{I|L}DEK{I|L}EVK;TT{I|L}DEK{I|L}EKV;TTVEEK{I|L}EVK;TTVEEK{I|L}EKV;TT{I|L}D{[TV]|[{I|L}S]}G{I|L}EVK;TT{I|L}D{[TV]|[{I|L}S]}G{I|L}EKV;TTVE{[TV]|[{I|L}S]}G{I|L}EVK;TTVE{[TV]|[{I|L}S]}G{I|L}EKV;TT{I|L}DE{I|L}{I|L}[SG]VK;TT{I|L}DE{I|L}{I|L}[SG]KV 7.4519;7.359;7.0034;6.9105;6.6717;6.5788;6.2232;6.1303;5.9729;5.8799 -;+;-;-;-;-;-;-;-;- + 9306 + 1 1.472 163992.3 1.0 4208 5260 9458 HBL1_DMSO_200M_050219_1,9470 HBL1_DMSO_200M_050219_1,9470,TTLDEKIEKV True True TTLDEKIEKV 49.579342 588.329577624798 2908608.0 9458.0 ENST00000484427.5_1_20:47835892-47850293:+|nuORF;;ENSG00000124228|ENST00000618172|DDX27;;nc|ENSG00000124228|Q96GQ7|DDX27 6.830857594807942 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9471 49.592 732.0 265610.0 25 0 20749.0 -1 0 203 543.3011701285468 542.2938936619468 1 545.3072997927666 MULTI CID FTMS 0 0 0 9458 182953.46875 0.6627787568401821 1 -0.1092453002929687 13 3 T{M(Oxidation (M))|F}K 3 -1 14.952 0.0 0.0 2.7572 0.0 0.0 148.10588814612487 0.0 148.10588814612487 0.0 1.8184738910328693 0.0 0.0 0 0.0 0.0 0.0 0.1139829889124311 T{M(Oxidation (M))|F}K 2.7572 - 133 + 1 1.472 150027.0 1.0 4209 5260 9458 HBL1_DMSO_200M_050219_1,9471 HBL1_DMSO_200M_050219_1,9471, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9472 49.606 800.0 101790.0 25 0 24498.0 -1 0 48 1121.1324077054633 3360.37539371659 3 1121.467456042767 MULTI CID FTMS 0 0 0 9458 152087.984375 0.1561914360201568 2 -0.1823883056640625 14 3 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.28163 0.0 0.0 1797.6457317066272 1355.6486300104127 3153.29436171704 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.28163 - 24 + 1 1.472 72141.8 0.800000011920929 4210 5260 9458 HBL1_DMSO_200M_050219_1,9472 HBL1_DMSO_200M_050219_1,9472, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9473 49.62 789.0 171560.0 25 0 20686.0 + -1 YSALLLWIDM 10 146 620.8184241490699 0 620.7781249880791 PEAK CID FTMS 0 0 0 -1 0 15 Oxidation (M) _YSALLLWIDM(Oxidation (M))_ REV__ENSG00000163444|ENST00000367242|TMEM183A;REV__ENST00000463015.1_1_1:202977868-202984294:+|nuORF;REV__nc|ENSG00000163444|Q8IXX5-2|TMEM183A;REV__nc|ENSG00000224831|Q1AE95|TMEM183BP 14.838274106304384 0.3381107837965078 3 EA{I|L}D 4 -1 19.686 0.0 0.0 1.588 0.0 0.0 676.3543643120084 132.04567896060783 808.4000432726162 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 EA{I|L}D 1.588 - 214 + 1 1.472 101820.2 1.0 4211 5260 9458 HBL1_DMSO_200M_050219_1,9473 HBL1_DMSO_200M_050219_1,9473,YSALLLWIDM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9474 49.623 95.0 968020.0 25 0 75557.0 + 39212 TYVTPRRPF 9 89 379.5452557090981 1135.6139377274944 3 379.5451843142509 MULTI CID FTMS 0 0 0 9458 148294.015625 0.056024740898729 -6 0.65692138671875 16 Unmodified _TYVTPRRPF_ ENSG00000170889|ENST00000302907|RPS9;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 41.8396318013385 0.0653578398400075 3 TYVT[RP]R{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 9 0 + 57.052 0.0 0.0 5.0239 5.0239 88.722 0.0 0.0 0.0 43.20468618756989 2.934458924424 2.934458924424 57.05166101279061 0 0.2887254899964357 2.0 0.3807196863200844 0.8807196863200843 + + TYVT[RP]R{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.0239 + + 105 + 1 1.472 80692.1 1.0 4212 5260 9458 HBL1_DMSO_200M_050219_1,9474 HBL1_DMSO_200M_050219_1,9474,TYVTPRRPF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9475 49.625 91.0 648870.0 25 0 56853.0 + 38672 TTLEGHLAKV 10 93 534.8047333410888 0 534.8057128787041 PEAK CID FTMS 0 0 0 9458 138859.953125 0.2405962897158197 -1 0.0926284790039062 17 Unmodified _TTLEGHLAKV_ ENSG00000237649|ENST00000428849|KIFC1 36.506200033944 0.1478449698601293 3 AS{M(Oxidation (M))|F}{I|L}E 5 9 20.891 0.0 0.0 1.9568 0.0 0.0 447.26562670303946 70.03061090640858 517.2962376094481 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.0 AS{M(Oxidation (M))|F}{I|L}E 1.9568 - 218 + 1 1.472 53440.1 1.0 4213 5260 9458 HBL1_DMSO_200M_050219_1,9475 HBL1_DMSO_200M_050219_1,9475,TTLEGHLAKV False True TTLEGHLAKV 49.625108 534.805712878704 5990401.0 9458.0 ENSG00000237649|ENST00000428849|KIFC1 4.511117935180664 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9476 49.628 141.0 463160.0 25 0 38044.0 + 4360 DATNMPAV 8 101 409.6894287060537 817.3643044789075 2 409.6892883181572 MULTI CID FTMS 0 0 0 9458 124369.5703125 0.1790610317929093 -2 0.2468452453613281 18 Unmodified _DATNMPAV_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 26.34127834903884 0.4900704351052977 3 V 1 7 13.495 0.0 0.0 1.651 0.0 0.0 700.2849567999997 0.0 700.2849567999997 0.0 -0.4845500650402812 -0.4845500650402812 0.0 0 0.0 0.0 0.0 0.0 + V 1.651 + + 51 + 1 1.472 55908.6 1.0 4214 5260 9458 HBL1_DMSO_200M_050219_1,9476 HBL1_DMSO_200M_050219_1,9476,DATNMPAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9477 49.642 800.0 79986.0 25 0 3746.1 -1 0 99 626.6406027519704 1876.899978856111 3 626.9747192263603 MULTI CID FTMS 0 0 0 9458 108530.4765625 0.8956650457068377 1 -0.1092453002929687 19 3 PDQ 3 -1 41.555 0.0 0.0 2.214 0.0 0.0 1518.7504254887267 0.0 1518.7504254887267 0.0 16.81794911570421 0.0 0.0 0 0.5 0.0 0.6861818737241735 1.048455006504028 PDQ 2.214 - 181 + 1 1.472 53853.0 0.7599999904632568 4215 5260 9458 HBL1_DMSO_200M_050219_1,9477 HBL1_DMSO_200M_050219_1,9477, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9478 49.644 105.0 271390.0 25 0 15986.0 + 36870 TENLHIHT 8 69 482.7451048260774 963.4756567189548 2 482.7454711794853 MULTI CID FTMS 0 0 0 9458 99186.5390625 0.6991293398505272 1 -0.1092453002929687 20 Unmodified _TENLHIHT_ REV__nc|ENSG00000175727|Q9HAP2-3|MLXIP;REV__nc|ENSG00000175727|Q9HAP2-5|MLXIP 14.581692164780916 0.6954967302934248 3 T 1 -1 18.737 0.0 0.0 1.9447 0.0 0.0 844.4170915107502 0.0 844.4170915107502 0.0 5.537275116073344 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 T 1.9447 + + 36 + 1 1.472 29801.7 1.0 4216 5260 9458 HBL1_DMSO_200M_050219_1,9478 HBL1_DMSO_200M_050219_1,9478,TENLHIHT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9480 49.648 11.0 5581700.0 25 0 961970.0 + 34890 SQIDPSSIERA 11 61 601.8039180680785 1201.5932832029569 2 601.8044311404228 MULTI CID FTMS 0 0 0 9479 4710428.5 0.5527761684314191 2 -0.1312484741210937 1 Unmodified _SQIDPSSIERA_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 46.4752305370441 0.1371501875038488 3 {[QS]|[NT]}{I|L}DPSS 7 4 60.846 0.0 0.0 5.0638 0.0 0.0 0.0 484.25116907291255 484.25116907291255 60.845850974183335 0.0 0.0 0.0 0 1.424742501084005 1.3010299956639813 0.4247425010840047 0.0 + {[QS]|[NT]}{I|L}DPSS 5.0638 + + 62 + 1 1.489 46293.3 1.0 4217 5261 9479 HBL1_DMSO_200M_050219_1,9480 HBL1_DMSO_200M_050219_1,9480,SQIDPSSIERA False True SQIDPSSIERA 49.648393 601.804431140423 229191264.0 9479.0 EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;;ENSG00000100393|ENST00000263253|EP300 7.08570130666097 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9481 49.655 382.0 781540.0 25 0 187450.0 -1 0 68 1158.1412909189787 3471.4020433571363 3 1158.475634753704 MULTI CID FTMS 0 0 0 9479 1224926.125 0.6555359098474054 -1 0.1092453002929687 2 3 YGC(Carbamidomethyl (C)){M(Oxidation (M))|F}YGYW 8 -1 25.839 0.0 0.0 0.74434 0.0 0.0 1254.4520444331113 1117.5479436784274 2371.999988111538 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YGC(Carbamidomethyl (C)){M(Oxidation (M))|F}YGYW 0.74434 - 389 + 1 1.489 238431.9 1.0 4218 5261 9479 HBL1_DMSO_200M_050219_1,9481 HBL1_DMSO_200M_050219_1,9481, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9482 49.656 17.0 3283200.0 25 0 313840.0 -1 0 70 543.3011701285468 542.2938936619468 1 543.3015014529228 MULTI CID FTMS 0 0 0 9479 1987689.75 0.3849665590412604 2 -0.1312484741210937 3 3 N 1 -1 5.9862 0.0 0.0 1.1039 0.0 0.0 343.16144539710143 82.06694971256093 425.2283951096624 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 N 1.1039 - 6 + 1 1.489 48659.0 1.0 4219 5261 9479 HBL1_DMSO_200M_050219_1,9482 HBL1_DMSO_200M_050219_1,9482, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9483 49.658 50.0 1913900.0 25 0 440200.0 + + 42591 DAHSNLASI 9 93 464.28466961522446 926.5547862972488 2 464.2848083376884 MULTI CID FTMS 0 0 0 9479 1580856.0 0.2772007399356313 -2 0.201873779296875 4 Unmodified _VTRKPEVV_ nc|ENSG00000147162|O15294-3|OGT;ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-4|OGT;nc|ENSG00000147162|O15294-2|OGT 16.942295170755138 0.6606234159769251 3 {I|L}VVV 4 -1 32.295 0.0 0.0 3.4855 0.0 0.0 498.2556935041032 0.0 498.2556935041032 0.0 10.622512068488277 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}VVV 3.4855 - 230 1 1.489 76974.9 1.0 4220 5261 9479 HBL1_DMSO_200M_050219_1,9483 HBL1_DMSO_200M_050219_1,9483,VTRKPEVV False False DAHSNLASI 49.657797 464.284808337688 58028800.0 9479.0 nc|ENSG00000147162|O15294-3|OGT;;ENSG00000147162|ENST00000373719|OGT;;nc|ENSG00000147162|O15294-4|OGT;;nc|ENSG00000147162|O15294-2|OGT 2.843151609102885 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9484 49.659 32.0 1567700.0 25 0 143260.0 + 25312 NAGPPSHII 9 79 453.24574919642566 904.4769454596512 2 453.2457458376884 MULTI CID FTMS 0 0 0 9479 1558695.375 0.7336595869663601 -1 0.1092453002929687 5 Unmodified _NAGPPSHII_ ENSG00000132128|ENST00000617190|LRRC41;nc|ENSG00000132128|Q15345-3|LRRC41 42.09456458481378 0.0639583784996157 3 {[QG]|[NA]}GP[PS]H{I|L}{I|L} 9 0 + 46.577 0.0 0.0 5.1496 5.1496 88.931 0.0 0.0 0.0 35.15031251017078 1.8842499412940583 1.8842499412940583 46.57698754585809 0 0.8494850021680094 2.0 0.0 0.0 + + {[QG]|[NA]}GP[PS]H{I|L}{I|L} 5.1496 + + 85 + 1 1.489 43458.5 1.0 4221 5261 9479 HBL1_DMSO_200M_050219_1,9484 HBL1_DMSO_200M_050219_1,9484,NAGPPSHII True True NAGPPSHII 49.658974 453.245745837688 104061860.0 9479.0 ENSG00000132128|ENST00000617190|LRRC41;;nc|ENSG00000132128|Q15345-3|LRRC41 5.430192470550537 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9485 49.66 37.0 1479300.0 25 0 152620.0 + 12956 HAHAQIPVV 9 82 486.2739880148469 970.5334230964936 2 486.2742187380791 MULTI CID FTMS 0 0 0 9479 1094342.625 0.5344446815076365 -1 0.1092453002929687 6 Unmodified _HAHAQIPVV_ ENSG00000112701|ENST00000447266|SENP6;ENST00000487548.2_1_6:76343389-76344528:+|nuORF;nc|ENSG00000112701|Q9GZR1-2|SENP6 30.22481116460888 0.1466181017706357 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WN]|[YH]}{I|L}PVV 8 4 + 36.163 0.0 0.0 3.726 3.726 79.144 0.0 0.0 0.0 13.925449767853308 24.17280924645823 13.925449767853308 8.45098040014257 0 0.9049471895720984 1.5228787452803376 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WN]|[YH]}{I|L}PVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[Y{I|L}]HPVV;[HA]Q{I|L}AHPVV;[HA]Q[HA]{I|L}PVV;[HA]H[QA]{I|L}PVV;[HA][AG]{I|L}AHPVV;[HA][AG][HA]{I|L}PVV 3.726;2.8553;2.1534;2.0226;1.6435;1.2046;1.0739 -;-;-;-;+;-;- + 110 1 1.489 47789.8 1.0 4222 5261 9479 HBL1_DMSO_200M_050219_1,9485 HBL1_DMSO_200M_050219_1,9485,HAHAQIPVV False True HAHAQIPVV 49.660153 486.274218738079 16020419.0 9479.0 nc|ENSG00000112701|Q9GZR1-2|SENP6;;ENST00000487548.2_1_6:76343389-76344528:+|nuORF;;ENSG00000112701|ENST00000447266|SENP6 4.584524472554524 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9486 49.661 45.0 1416600.0 25 0 164220.0 + 2442 AQTPPGPSL 9 86 434.2320132445057 866.4494735558114 2 434.2320129275322 MULTI CID FTMS 0 0 0 9479 876811.5625 0.7953602142582177 2 -0.1312484741210937 7 Unmodified _AQTPPGPSL_ ENSG00000167978|ENST00000301740|SRRM2;nc|ENSG00000167978|Q9UQ35-2|SRRM2 65.23502041540118 0.0231836506122253 3 [QA]TPPGPS{I|L} 9 0 [QA]T + + 29.403 13.244 4.4126 3.3935 3.3935 51.02 0.0 0.0 0.0 0.0 16.158401914925854 0.0 0.0 0 0.805462187404089 0.0 0.5941876774005248 0.0 + + [QA]TPPGPS{I|L} 3.3935 + + 111 + 1 1.489 54028.6 1.0 4223 5261 9479 HBL1_DMSO_200M_050219_1,9486 HBL1_DMSO_200M_050219_1,9486,AQTPPGPSL True True AQTPPGPSL 49.661381 434.232012927532 34253214.0 9479.0 nc|ENSG00000167978|Q9UQ35-2|SRRM2;;ENSG00000167978|ENST00000301740|SRRM2 7.420116742451985 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9487 49.664 141.0 569740.0 25 0 61605.0 20929 LNEISEETTIQ 11 93 638.8177953348397 1275.6210377364794 2 638.8178588747978 MULTI CID FTMS 0 0 0 9479 568312.5625 0.4281168247963279 -1 0.1092453002929687 8 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 45.739877483867886 0.1412225664835785 3 {I|L}NADQ 5 8 43.593 0.0 0.0 3.4174 0.0 0.0 0.0 731.3484591119749 731.3484591119749 -10.652369334980364 0.0 -10.652369334980364 0.0 0 0.7887254899964358 1.154901959985743 0.0 0.0 {I|L}NADQ 3.4174 - 475 + 1 1.489 68947.4 1.0 4224 5261 9479 HBL1_DMSO_200M_050219_1,9487 HBL1_DMSO_200M_050219_1,9487,LNEISEETTIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9488 49.667 142.0 770330.0 25 0 53431.0 + 12151 GQMDPSAQI 9 127 473.71846283696425 945.4223727407284 2 473.7185546755791 MULTI CID FTMS 0 0 0 9479 534182.0 0.2247251420460521 -2 0.201873779296875 9 Unmodified _GQMDPSAQI_ ENSG00000164880|ENST00000404767|INTS1;ENST00000493446.1_1_7:1510215-1510538:-|nuORF 78.7280429016045 0.0178249292250809 3 {[QG]|[NA]}MD[PS]AQ{I|L} 9 0 + 48.169 0.0 0.0 5.0949 5.0949 77.129 0.0 0.0 0.0 2.8748363342907624 10.330145895351848 2.8748363342907624 2.8748363342907624 0 1.288106835214472 0.638272163982407 0.5 0.9802046884880936 + + {[QG]|[NA]}MD[PS]AQ{I|L};[AG]GMD[PS]AQ{I|L};[PS]ADMNAQ{I|L};{[QG]|[NA]}MD[TP]GQ{I|L};[PS]DAMNAQ{I|L};[PS]AQ[EC]AQ{I|L};{[SA]|[TG]}PDMNAQ{I|L};[AG]GMD[TP]GQ{I|L};[PS]AQDMGQ{I|L};[AG]G[TP][EC]AQ{I|L} 5.0949;4.7908;4.5711;4.1263;3.9473;3.8932;3.8633;3.8222;3.7664;3.6319 +;-;-;-;-;-;-;-;-;- + 684 1 1.489 87325.2 1.0 4225 5261 9479 HBL1_DMSO_200M_050219_1,9488 HBL1_DMSO_200M_050219_1,9488,GQMDPSAQI True True GQMDPSAQI 49.667076 473.718554675579 24601592.0 9479.0 ENST00000493446.1_1_7:1510215-1510538:-|nuORF;;ENSG00000164880|ENST00000404767|INTS1 8.517872333526611 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9489 49.671 190.0 468130.0 25 0 69768.0 + 29600 QLVNDGDADL 10 133 530.251198285898 1058.487843638596 2 530.2516357302666 MULTI CID FTMS 0 0 0 9479 431473.15625 0.7092002889164227 -1 0.1092453002929687 10 Unmodified _QLVNDGDADL_ REV__ENSG00000137807|ENST00000679126|KIF23;REV__nc|ENSG00000137807|Q02241-2|KIF23;REV__nc|ENSG00000137807|Q02241-3|KIF23;REV__nc|ENSG00000137807|Q02241|KIF23 22.736283301280096 0.4578556481593033 3 [Q{I|L}][C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}PPG{I|L} 9 -1 + 33.52 0.0 0.0 3.1668 3.1668 70.133 0.0 0.0 0.0 1.5976529913728434 1.7609125905568137 1.5976529913728434 1.7609125905568137 0 0.7742275032520141 0.7695510786217261 0.0 0.0 [Q{I|L}][C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}PPG{I|L};[Q{I|L}][C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}PPAV;M{[DS]|[MA]|[CV]|TT}[VP]{M(Oxidation (M))|F}PPG{I|L};M{[DS]|[MA]|[CV]|TT}[VP]{M(Oxidation (M))|F}PPAV;M{[WT]|[RM]}EEPPG{I|L};[Q{I|L}][C(Carbamidomethyl (C))K]YY{[QG]|[NA]};M{[WT]|[RM]}EEPPAV;[Q{I|L}][C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}P{[VA]|[{I|L}G]}P;[Q{I|L}][C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}V[PA]P;M{[WT]|[RM]}[HM]SPG{I|L} 3.1668;3.0004;2.4665;2.3001;1.8747;1.8335;1.7083;1.4501;1.2837;0.92992 -;-;-;-;-;-;-;-;-;- 430 + 1 1.489 73229.1 1.0 4226 5261 9479 HBL1_DMSO_200M_050219_1,9489 HBL1_DMSO_200M_050219_1,9489,QLVNDGDADL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9490 49.673 101.0 673530.0 25 0 48796.0 + 9137 FFRERQETL 9 97 409.2156815812243 1224.625215343873 3 409.2158691287041 MULTI CID FTMS 0 0 0 9479 421153.3125 1.0 0 0.0 11 Unmodified _FFRERQETL_ ENSG00000120278|ENST00000696526|PLEKHG1 24.99096001346401 0.2132109383330889 3 QET{I|L} 4 5 35.394 0.0 0.0 2.8902 0.0 0.0 735.3817970904611 0.0 735.3817970904611 0.0 18.73835032203424 0.0 0.0 0 0.6989700043360187 0.0 0.4247425010840047 0.0 + QET{I|L} 2.8902 + + 226 1 1.489 59396.1 1.0 4227 5261 9479 HBL1_DMSO_200M_050219_1,9490 HBL1_DMSO_200M_050219_1,9490,FFRERQETL False True FFRERQETL 49.672912 409.215869128704 2741775.0 9479.0 ENSG00000120278|ENST00000696526|PLEKHG1 4.297152837117513 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9491 49.675 93.0 781170.0 25 0 114360.0 + 13140 HFIRPGNAL 9 90 512.7877955580366 1023.5610381828732 2 512.7878906130791 MULTI CID FTMS 0 0 0 9479 398456.28125 0.4152624455453754 -1 0.1092453002929687 12 Unmodified _HFIRPGNAL_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 32.30548876998284 0.1201446275138228 3 H{M(Oxidation (M))|F}{I|L}R 4 5 46.542 0.0 0.0 4.5471 0.0 0.0 0.0 467.2254427545532 467.2254427545532 26.62076897255559 0.0 0.0 0.0 0 1.4604093769761874 0.0 0.0 0.0 + H{M(Oxidation (M))|F}{I|L}R 4.5471 + + 216 + 1 1.489 61054.7 1.0 4228 5261 9479 HBL1_DMSO_200M_050219_1,9491 HBL1_DMSO_200M_050219_1,9491,HFIRPGNAL True True HFIRPGNAL 49.674956 512.787890613079 6029866.0 9479.0 nc|ENSG00000083520|Q9Y2L1-2|DIS3;;ENSG00000083520|ENST00000377767|DIS3 4.48420508702596 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9492 49.677 94.0 866310.0 25 0 46642.0 + 25764 NIVERVKEV 9 113 362.5484654931903 0 362.5483886599541 PEAK CID FTMS 0 0 0 9479 369950.0625 0.444051720703878 -1 0.1092453002929687 13 Unmodified _NIVERVKEV_ ENSG00000132274|ENST00000379965|TRIM22;ENST00000460454.1_1_11:5717462-5717939:+|nuORF;nc|ENSG00000132274|Q8IYM9-2|TRIM22 18.1463463914782 0.2188250594445807 3 N 1 8 10.485 0.0 0.0 1.45 0.0 0.0 523.9499145295463 82.0669420831664 606.0168566127127 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + N 1.45 + + 61 + 1 1.489 73655.7 1.0 4229 5261 9479 HBL1_DMSO_200M_050219_1,9492 HBL1_DMSO_200M_050219_1,9492,NIVERVKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9493 49.679 90.0 1882000.0 25 0 310700.0 + 43109 VYPDGIRHI 9 124 357.19787880855125 1068.5718070258538 3 357.1973449587822 MULTI CID FTMS 0 0 0 9479 380356.1875 0.0506030037752406 -3 0.3560905456542969 14 Unmodified _VYPDGIRHI_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 46.020951573049366 0.0490941689151868 3 [YV]PD{I|L}GRH{I|L} 9 2 + 70.325 0.0 0.0 6.5812 6.5812 83.714 0.0 0.0 0.0 45.13097571916498 6.692709926768728 6.692709926768728 3.706290716515923 0 0.2742275032520141 2.0 0.4247425010840047 0.5796896906561032 [YV]PD{I|L}GRH{I|L};[YV]P{I|L}DGRH{I|L};[YV]{I|L}PDGRH{I|L};[YV]PDG{I|L}RH{I|L};[DP][R{I|L}]{I|L}DPM{I|L};[DP][R{I|L}]D{I|L}PM{I|L};[DP][R{I|L}]DP{I|L}M{I|L};[EP][RV]{I|L}DPM{I|L};[VP]{[RE]|[WV]}{I|L}DPM{I|L};[DP][R{I|L}]GH{I|L}[YV] 6.5812;6.2344;6.0231;6.0178;5.1714;4.8246;4.6133;2.9274;2.8533;2.7197 -;-;-;+;-;-;-;-;-;- + 329 + 1 1.489 155286.8 1.0 4230 5261 9479 HBL1_DMSO_200M_050219_1,9493 HBL1_DMSO_200M_050219_1,9493,VYPDGIRHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9494 49.683 217.0 442870.0 25 0 37197.0 + 39727 VEKHLNAQL 9 143 351.201413004345 1050.582409613235 3 351.2011596560478 MULTI CID FTMS 0 0 0 9479 343652.3125 1.0 0 0.0 15 Unmodified _VEKHLNAQL_ ENSG00000163635|ENST00000674280|ATXN7;ENST00000474112.5_1_3:63898274-63982174:+|nuORF;ENST00000484668.1_1_3:63973932-63976536:+|nuORF;nc|ENSG00000163635|O15265-2|ATXN7;nc|ENSG00000163635|O15265-3|ATXN7 15.738622578938676 0.4106572216562794 3 {NN|[MP]|[D{I|L}]|[EV]}HK{I|L}NAQ{I|L} 9 2 + 39.42 0.0 0.0 3.7522 3.7522 76.353 0.0 0.0 0.0 5.016894462103991 9.889917747712651 5.016894462103991 5.016894462103991 0 0.2742275032520141 1.154901959985743 0.0 0.8807196863200843 {NN|[MP]|[D{I|L}]|[EV]}HK{I|L}NAQ{I|L};[HD]{I|L}K{I|L}NAQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}HK{I|L}GGAQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AN{I|L}RRY;[HD]{I|L}K{I|L}GGAQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AGG{I|L}RRY;{NN|[MP]|[D{I|L}]|[EV]}HN[K{I|L}]AQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ANKK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}G;[HD]{I|L}N[K{I|L}]AQ{I|L};[VP]P[DN][R{I|L}]Q{I|L} 3.7522;3.2746;2.8757;2.5913;2.3982;1.7097;1.5132;1.2186;1.0357;0.873 -;-;-;-;-;-;-;-;-;- 304 1 1.489 81526.1 1.0 4231 5261 9479 HBL1_DMSO_200M_050219_1,9494 HBL1_DMSO_200M_050219_1,9494,VEKHLNAQL False True VEKHLNAQL 49.683081 351.201159656048 1964077.875 9479.0 nc|ENSG00000163635|O15265-3|ATXN7;;ENSG00000163635|ENST00000674280|ATXN7;;nc|ENSG00000163635|O15265-2|ATXN7;;ENST00000474112.5_1_3:63898274-63982174:+|nuORF;;ENST00000484668.1_1_3:63973932-63976536:+|nuORF 2.18779730796814 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9495 49.693 542.0 291350.0 25 0 22168.0 + 45889 YYRYPTGESY 10 170 649.7878254936915 1297.5610980541828 2 649.7891723513603 MULTI CID FTMS 0 0 0 9479 320377.3125 0.4467336303285847 -1 0.1092453002929687 16 Unmodified _YYRYPTGESY_ ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3 87.25819977447905 0.0111194359805254 3 YYRYPTGESY 10 0 + 94.404 0.0 0.0 7.2755 7.2755 89.921 0.0 0.0 0.0 4.514898530502308 72.03061507837404 4.514898530502308 8.010299956639813 0 1.674742501084005 1.6989700043360187 0.7302046884880937 0.0 + + YYRYPTGESY;YYRYPTGTDY;YYRYPGTESY;YY[VG]YPTWSY;YYRYPGTTDY;YYYYY[{I|L}T]SY;YYAGTPY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CT]|[{M(Oxidation (M))|F}G]};YYK[C(Carbamidomethyl (C))K]TGESY;YYQTPY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CT]|[{M(Oxidation (M))|F}G]};YYRYPGWMY 7.2755;6.6582;6.5422;6.0624;5.9248;5.8535;5.512;5.2121;5.0052;4.8213 +;-;-;-;-;-;-;-;-;- + 6648 1 1.489 120947.9 1.0 4232 5261 9479 HBL1_DMSO_200M_050219_1,9495 HBL1_DMSO_200M_050219_1,9495,YYRYPTGESY True True YYRYPTGESY 49.692637 649.78917235136 4713950.5 9479.0 ENSG00000170525|ENST00000379775|PFKFB3;;nc|ENSG00000170525|Q16875-3|PFKFB3;;nc|ENSG00000170525|Q16875-4|PFKFB3;;nc|ENSG00000170525|Q16875-2|PFKFB3 7.571310997009277 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9496 49.697 260.0 320800.0 25 0 38938.0 + 11385 GGGSGRGF 8 120 347.66676074906985 0 347.6665527224541 PEAK CID FTMS 0 0 0 9479 304728.625 0.5063724210817335 -1 0.1092453002929687 17 Unmodified _GGGSGRGF_ REV__ENST00000563957.6_1_16:30392598-30394125:-|nuORF;REV__nc|ENSG00000180096|Q8WYJ6-2|SEPTIN1 2.302733041254933 0.5920993303473642 3 Q 1 -1 5.8188 0.0 0.0 0.83927 0.0 0.0 494.1863219358366 68.05137048892811 562.2376924247646 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 Q 0.83927 - 28 + 1 1.489 68848.4 1.0 4233 5261 9479 HBL1_DMSO_200M_050219_1,9496 HBL1_DMSO_200M_050219_1,9496,GGGSGRGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9497 49.702 226.0 230150.0 25 0 21494.0 37047 TGFAGSNV 8 95 376.6821748469645 751.3497967607291 2 376.6820861697197 MULTI CID FTMS 0 0 0 9479 297375.5 0.4509170764132573 -1 0.1092453002929687 18 Unmodified _TGFAGSNV_ CON__Q148H6 8.593279151180031 0.7721714526254883 3 [RD]S{M(Oxidation (M))|F}EV 6 7 + 31.362 0.0 0.0 4.174 4.174 82.229 0.0 0.0 0.0 3.9266750356873104 19.76789385964942 3.9266750356873104 9.20941280735775 0 0.4247425010840047 0.0 0.0 0.25 [RD]S{M(Oxidation (M))|F}EV;{NN|[MP]|[D{I|L}]|[EV]}[YN]EV;[HC][HK]EV 4.174;2.9483;2.147 -;-;- 44 1 1.489 43425.7 1.0 4234 5261 9479 HBL1_DMSO_200M_050219_1,9497 HBL1_DMSO_200M_050219_1,9497,TGFAGSNV False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 9498 49.706 230.0 268710.0 25 0 16143.0 + 2719 ATGENLPRV 9 94 478.7617759464704 955.5089989597408 2 478.7622558474541 MULTI CID FTMS 0 0 0 9479 276510.6875 0.0849716373947105 -6 0.6829795837402344 19 Unmodified _ATGENLPRV_ ENSG00000166181|ENST00000531273|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-6|API5 24.020572477871973 0.2255576514309169 3 [TA]DAN{I|L}PRV 9 2 + 57.324 0.0 0.0 5.9993 5.9993 84.275 0.0 0.0 0.0 41.56202041583067 4.360106705664215 4.360106705664215 5.963076624388712 0 0.6989700043360187 2.0 0.0 0.4247425010840047 [TA]DAN{I|L}PRV;[TA]DAN{I|L}V[RP];[TA]DAGG{I|L}PRV;[TA]DAVQPRV;[TA]DAGG{I|L}V[RP];[TA]DAVQV[RP];[TA]DAV[AG]PRV;[TA]DAV[AG]V[RP];{[QV]|[N{I|L}]|[RA]|[KV]}KKNAD[PG] 5.9993;5.3752;5.0356;4.9527;4.4115;4.3286;3.989;3.3649;1.777 -;-;-;-;-;-;-;-;- 189 + 1 1.489 52360.3 1.0 4235 5261 9479 HBL1_DMSO_200M_050219_1,9498 HBL1_DMSO_200M_050219_1,9498,ATGENLPRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9499 49.717 580.0 67153.0 25 0 3315.1 + 16845 KIDEHHFVAV 10 77 597.8170337118727 1193.6195144905453 2 597.8177368044853 MULTI CID FTMS 0 0 0 9479 266043.25 0.2060367870766235 2 -0.1312484741210937 20 Unmodified _KIDEHHFVAV_ ENSG00000149313|ENST00000278618|AASDHPPT 7.101721422024254 0.6937868747866316 3 H{M(Oxidation (M))|F}VAV 5 5 22.725 0.0 0.0 1.9039 0.0 0.0 622.3088246076187 0.0 622.3088246076187 0.0 9.53738474572848 0.0 0.0 0 0.4731975075880329 0.0 0.0 0.0 + H{M(Oxidation (M))|F}VAV 1.9039 + + 29 1 1.489 37794.2 1.0 4236 5261 9479 HBL1_DMSO_200M_050219_1,9499 HBL1_DMSO_200M_050219_1,9499,KIDEHHFVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9501 49.722 3.5 7945200.0 25 0 828870.0 + 28745 PVWAISIVV 9 63 492.2978879307647 982.5812229283296 2 492.2981140017509 MULTI CID FTMS 0 0 0 9500 18321522.0 0.348164557481602 6 -0.5677375793457031 1 Unmodified _PVWAISIVV_ REV__ENSG00000198743|ENST00000381151|SLC5A3 26.34127834903884 0.1960301806784604 3 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 7 -1 23.962 0.0 0.0 2.4387 0.0 0.0 0.0 213.1249600711607 213.1249600711607 11.48789141519238 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.0 0.3807196863200844 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 2.4387 - 42 1 1.479 26204.5 1.0 4237 5262 9500 HBL1_DMSO_200M_050219_1,9501 HBL1_DMSO_200M_050219_1,9501,PVWAISIVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9502 49.723 31.0 1748000.0 25 0 120350.0 + 31849 RTFEKIEEV 9 81 575.8089007506478 1149.6032485680955 2 575.8090698122978 MULTI CID FTMS 0 0 0 9500 2371439.0 0.3395874497049673 3 -0.29852294921875 2 Unmodified _RTFEKIEEV_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 28.49450938151212 0.1686335738423394 3 V{M(Oxidation (M))|F}E{I|L}KE{[WT]|[RM]}V 9 6 + 63.695 0.0 0.0 5.5406 5.5406 80.848 0.0 0.0 0.0 44.090475125574855 12.191512336730028 12.191512336730028 4.146518864155119 0 0.7614393726401688 0.0 0.9247425010840048 0.0 V{M(Oxidation (M))|F}E{I|L}KE{[WT]|[RM]}V;V{M(Oxidation (M))|F}E{I|L}K{[WT]|[RM]}EV;V{M(Oxidation (M))|F}{I|L}EKE{[WT]|[RM]}V;V{M(Oxidation (M))|F}{I|L}EK{[WT]|[RM]}EV;HHT{I|L}KE{[WT]|[RM]}V;{[QN]|[E{I|L}]|[KN]}[YQ]K{I|L}EEV;{[ET]|[MV]}R{M(Oxidation (M))|F}K{I|L}EEV;HHT{I|L}K[HK]SY;HHT{I|L}K{[WT]|[RM]}EV;{[QN]|[E{I|L}]|[KN]}[YQ]KE{I|L}EV 5.5406;5.1799;4.8943;4.5336;4.4187;4.4148;4.0888;3.8135;3.8107;3.7685 -;-;-;-;-;-;-;-;-;- 322 + 1 1.479 47956.2 1.0 4238 5262 9500 HBL1_DMSO_200M_050219_1,9502 HBL1_DMSO_200M_050219_1,9502,RTFEKIEEV False True RTFEKIEEV 49.722716 575.809069812298 137194152.0 9500.0 nc|ENSG00000105486|P18858-2|LIG1;;ENSG00000105486|ENST00000263274|LIG1;;nc|ENSG00000105486|P18858-3|LIG1 5.333660920461019 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9503 49.724 9.3 6855000.0 25 0 964920.0 + 3371 AYQEAVRTL 9 61 525.7823194704627 1049.5500860077252 2 525.7823974490166 MULTI CID FTMS 0 0 0 9500 4443970.0 0.6384183323262805 -1 0.0731430053710937 3 Unmodified _AYQEAVRTL_ ENSG00000127666|ENST00000248244|TICAM1 38.17557092003332 0.0854718145212029 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEAV 6 3 63.193 0.0 0.0 6.0209 0.0 0.0 0.0 385.22165857486567 385.22165857486567 53.1926720723289 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.8494850021680094 0.3807196863200844 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEAV 6.0209 + + 49 + 1 1.479 54508.4 1.0 4239 5262 9500 HBL1_DMSO_200M_050219_1,9503 HBL1_DMSO_200M_050219_1,9503,AYQEAVRTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9504 49.725 16.0 1713300.0 25 0 158590.0 26000 NLVKDLRVE 9 57 543.3195349119434 1084.624516890687 2 543.3193847537041 MULTI CID FTMS 0 0 0 9500 1755618.75 1.0 0 0.0 4 Unmodified _NLVKDLRVE_ ENSG00000118557|ENST00000237353|PMFBP1;nc|ENSG00000118557|Q8TBY8-1|PMFBP1;nc|ENSG00000118557|Q8TBY8-3|PMFBP1;nc|ENSG00000118557|Q8TBY8-4|PMFBP1 8.745405648335112 0.6093864874670651 3 {[QV]|[N{I|L}]|[RA]|[KV]}V 3 6 34.705 0.0 0.0 3.1997 0.0 0.0 0.0 755.4081514947874 755.4081514947874 23.59575616836501 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}V 3.1997 + + 22 + 1 1.479 28295.2 1.0 4240 5262 9500 HBL1_DMSO_200M_050219_1,9504 HBL1_DMSO_200M_050219_1,9504,NLVKDLRVE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9505 49.726 38.0 1018300.0 25 0 141850.0 + 3252 AYGLSREV 8 64 447.7376341103164 893.4607152874329 2 447.7375976443291 MULTI CID FTMS 0 0 0 9500 1837843.5 0.5157324055346054 3 -0.29852294921875 5 Unmodified _AYGLSREV_ ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 21.74664581756881 0.5868176546531598 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L} 4 4 45.445 0.0 0.0 5.0864 0.0 0.0 0.0 486.2319429986938 486.2319429986938 32.346368802282015 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L} 5.0864 + + 30 + 1 1.479 38329.2 1.0 4241 5262 9500 HBL1_DMSO_200M_050219_1,9505 HBL1_DMSO_200M_050219_1,9505,AYGLSREV False True AYGLSREV 49.726251 447.737597644329 29429084.0 9500.0 ENSG00000158710|ENST00000368097|TAGLN2;;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;;nc|ENSG00000158710|P37802-2|TAGLN2 -0.4617195924123128 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9506 49.728 71.0 1197100.0 25 0 236040.0 -1 CCDCCGLGLR 10 76 635.7414019727097 1269.4682510122193 2 635.7415649294853 MULTI CID FTMS 0 0 0 9500 1133540.25 0.7616194706966227 -1 0.0731430053710937 6 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))DC(Carbamidomethyl (C))C(Carbamidomethyl (C))GLGLR_ ENSG00000163520|ENST00000404922|FBLN2;nc|ENSG00000163520|P98095|FBLN2 1.4819007175156935 0.719781833666733 3 EEK{M(Oxidation (M))|F}{I|L}R 6 -1 39.385 0.0 0.0 3.1025 0.0 0.0 449.0245724268484 0.0 449.0245724268484 0.0 25.67410004652736 0.0 0.0 0 0.0 0.0 0.0 0.0 EEK{M(Oxidation (M))|F}{I|L}R 3.1025 - 81 + 1 1.479 65534.5 1.0 4242 5262 9500 HBL1_DMSO_200M_050219_1,9506 HBL1_DMSO_200M_050219_1,9506,CCDCCGLGLR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9507 49.729 64.0 1059000.0 25 0 140350.0 + 22169 LPPVRSSL 8 78 434.7662036322309 867.5178543312618 2 434.7661620974541 MULTI CID FTMS 0 0 0 9500 1120778.125 1.0 0 0.0 7 Unmodified _LPPVRSSL_ ENSG00000175877|ENST00000320531|TMEM270;nc|ENSG00000175877|Q6UE05-2|TMEM270 20.453626601364224 0.6087503291685402 3 {I|L}PP 3 5 50.445 0.0 0.0 5.8149 0.0 0.0 0.0 557.3070772760374 557.3070772760374 38.22682509756042 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PP 5.8149 + + 43 + 1 1.479 56981.2 1.0 4243 5262 9500 HBL1_DMSO_200M_050219_1,9507 HBL1_DMSO_200M_050219_1,9507,LPPVRSSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9508 49.731 42.0 1212600.0 25 0 193690.0 + 34363 SLTGHISTV 9 83 457.7497856590233 913.4850183848464 2 457.7492553591728 MULTI CID FTMS 0 0 0 9500 996180.5 0.8447717436043827 -1 0.0731430053710937 8 Unmodified _SLTGHISTV_ ENSG00000171566|ENST00000499023|PLRG1;nc|ENSG00000171566|O43660-2|PLRG1 26.88365393820708 0.1891292719743517 3 {[TV]|[{I|L}S]}[HA]S{I|L}{[WT]|[RM]} 8 5 + 42.452 0.0 0.0 4.6473 4.6473 84.137 0.0 0.0 0.0 9.854771935914002 2.174617874626037 2.174617874626037 9.854771935914002 0 0.5 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}[HA]S{I|L}{[WT]|[RM]};{[TV]|[{I|L}S]}[HV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TV;{[TV]|[{I|L}S]}[HV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{I|L};{[HG]|PP}T{I|L}S{I|L}{[WT]|[RM]};[PA]P{[ET]|[MV]}{I|L}{[WT]|[RM]};[PA]G[RN]{I|L}{[WT]|[RM]};[PA]PP[{M(Oxidation (M))|F}V]{[WT]|[RM]};{[SA]|[TG]}[QA]P[WR]V;[H{I|L}]{[SA]|[TG]}S{I|L}{[WT]|[RM]};[QP][RN]{I|L}{[WT]|[RM]} 4.6473;3.5685;2.9729;2.8231;2.1534;1.8233;1.7366;1.1642;1.1454;0.35644 -;-;-;-;-;-;-;-;-;- 343 1 1.479 45214.5 1.0 4244 5262 9500 HBL1_DMSO_200M_050219_1,9508 HBL1_DMSO_200M_050219_1,9508,SLTGHISTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9509 49.732 60.0 1092600.0 25 0 87724.0 + 4909 DGKVSVHVI 9 105 477.2750017155769 952.535450497954 2 477.2744628787041 MULTI CID FTMS 0 0 0 9500 798257.5 0.729670481347188 -1 0.0731430053710937 9 Unmodified _DGKVSVHVI_ ENSG00000169710|ENST00000306749|FASN 47.594388314883695 0.0456443387682827 3 GGDVSVHV{I|L} 9 2 62.168 0.0 0.0 6.5266 0.0 0.0 71.0743656842789 0.0 71.0743656842789 0.0 40.441993906176776 0.0 0.0 0 1.947621246364342 0.0 1.086696871556164 0.0 GGDVSVHV{I|L} 6.5266 - 391 1 1.479 52218.9 1.0 4245 5262 9500 HBL1_DMSO_200M_050219_1,9509 HBL1_DMSO_200M_050219_1,9509,DGKVSVHVI True True DGKVSVHVI 49.732132 477.274462878704 8503929.0 9500.0 ENSG00000169710|ENST00000306749|FASN 4.330399354298909 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9510 49.733 49.0 651430.0 25 0 78552.0 + 5848 DPVPEVRTV 9 63 506.2771651126911 1010.5397772921822 2 506.2782165408134 MULTI CID FTMS 0 0 0 9500 701156.8125 0.3057882950707353 -4 0.4292335510253906 10 Unmodified _DPVPEVRTV_ ENSG00000089154|ENST00000300648|GCN1 12.240655878213236 0.5053430591993562 3 [DP]VV 4 5 41.682 0.0 0.0 4.1248 0.0 0.0 0.0 597.3028048150999 597.3028048150999 34.69273760456403 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 [DP]VV 4.1248 - 14 + 1 1.479 30669.1 1.0 4246 5262 9500 HBL1_DMSO_200M_050219_1,9510 HBL1_DMSO_200M_050219_1,9510,DPVPEVRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9511 49.735 72.0 567340.0 25 0 141850.0 31856 RTGWVYRNV 9 64 384.2083421699769 1149.6031971101306 3 384.2077209353447 MULTI CID FTMS 0 0 0 9500 654428.875 0.2558431524709433 3 -0.29852294921875 11 Unmodified _RTGWVYRNV_ ENSG00000111906|ENST00000398153|HDDC2;ENST00000609574.1_1_6:125621682-125623108:-|nuORF;nc|ENSG00000111906|Q7Z4H3-2|HDDC2;nc|ENSG00000111906|Q7Z4H3-3|HDDC2 10.823927491677226 0.5436922275383211 3 V 1 8 14.604 0.0 0.0 1.2704 0.0 0.0 1032.5235061084688 0.0 1032.5235061084688 0.0 12.385606273598311 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2704 + + 10 + 1 1.479 41645.7 1.0 4247 5262 9500 HBL1_DMSO_200M_050219_1,9511 HBL1_DMSO_200M_050219_1,9511,RTGWVYRNV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9512 49.737 103.0 326720.0 25 0 25082.0 -1 IVGMAVVK 8 78 416.7515782530104 831.4886035728207 2 416.7514831423759 MULTI CID FTMS 0 0 0 9500 655237.8125 1.0 0 0.0 12 Oxidation (M) _IVGM(Oxidation (M))AVVK_ ENSG00000197106|ENST00000331565|SLC6A17 10.183394434864962 0.7604730176254005 3 K 1 -1 15.797 0.0 0.0 1.8998 0.0 0.0 685.3826903421551 0.0 685.3826903421551 0.0 -2.7865969499212184 -2.7865969499212184 0.0 0 0.0 0.0 0.0 0.2302046884880938 K 1.8998 + + 21 + 1 1.479 36484.1 1.0 4248 5262 9500 HBL1_DMSO_200M_050219_1,9512 HBL1_DMSO_200M_050219_1,9512,IVGMAVVK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9513 49.739 88.0 560430.0 25 0 113860.0 + 39215 TYVTPRRPF 9 61 568.8138039201181 1135.613054907036 2 568.8142578005791 MULTI CID FTMS 0 0 0 9500 637544.4375 0.9855923209545124 -2 0.1823883056640625 13 Unmodified _TYVTPRRPF_ ENSG00000170889|ENST00000302907|RPS9;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 4.75600775471527 0.7486543447549536 3 VT 2 7 10.969 0.0 0.0 0.96592 0.0 0.0 281.134003248636 651.3372100962431 932.4712133448792 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + VT 0.96592 + + 25 + 1 1.479 42042.4 1.0 4249 5262 9500 HBL1_DMSO_200M_050219_1,9513 HBL1_DMSO_200M_050219_1,9513,TYVTPRRPF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9514 49.741 63.0 799870.0 25 0 120310.0 + -1 VPLDGRPMNI 10 73 564.297835642436 1126.581118351672 2 564.2983276247978 MULTI CID FTMS 0 0 0 9500 549402.0625 0.6378583440823012 -1 0.0731430053710937 14 Oxidation (M) _VPLDGRPM(Oxidation (M))NI_ nc|ENSG00000183684|Q86V81|ALYREF;ENSG00000183684|ENST00000505490|ALYREF 15.248480904072842 0.5916873121453583 3 VP{I|L}D[NP]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V 10 -1 + 53.716 0.0 0.0 4.768 4.768 74.48 0.0 0.0 0.0 11.83153580401484 3.053948010664307 3.053948010664307 1.7609125905568137 0 0.3494850021680094 1.5228787452803376 0.0 0.0 VP{I|L}D[NP]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V;VP{I|L}D{[NV]|[RG]}[QP]{M(Oxidation (M))|F}V;VP{I|L}YY{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V;VP{I|L}YY{[WS]|[C(Carbamidomethyl (C)){I|L}]}TV;[VP]YY[KC]{I|L}{[QN]|[E{I|L}]|[KN]};YP{I|L}[YV]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V;[YT]{[QV]|[N{I|L}]|[RA]|[KV]}[YV]{I|L}{[QN]|[E{I|L}]|[KN]};YP{I|L}[YV]{[WS]|[C(Carbamidomethyl (C)){I|L}]}TV 4.768;4.6117;4.1882;3.3006;2.3567;1.9918;1.6299;1.1042 -;-;-;-;-;-;-;- 133 + 1 1.479 47793.7 1.0 4250 5262 9500 HBL1_DMSO_200M_050219_1,9514 HBL1_DMSO_200M_050219_1,9514,VPLDGRPMNI False False VPLDGRPMNI 49.74082 564.298327624798 21922966.0 9500.0 nc|ENSG00000183684|Q86V81|ALYREF;;ENSG00000183684|ENST00000505490|ALYREF 5.149672985076904 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9515 49.743 77.0 1504000.0 25 0 141450.0 + 39302 VADPHNLKI 9 125 336.1937422278868 1005.5593972838604 3 336.1935302615166 MULTI CID FTMS 0 0 0 9500 428754.625 0.7373852322249349 -1 0.0731430053710937 15 Unmodified _VADPHNLKI_ ENSG00000115042|ENST00000233379|FAHD2A;ENSG00000144199|ENST00000414820|FAHD2B;ENST00000463096.5_1_2:97749678-97751586:-|nuORF;ENST00000470100.1_1_2:96076623-96078518:+|nuORF;ENST00000607780.5_1_2:96676383-96687353:+|nuORF 19.361941925380144 0.3125782356748823 3 {[RE]|[WV]}PH{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L} 8 2 + 21.392 0.0 0.0 2.1274 2.1274 80.446 0.0 0.0 0.0 8.627859871303336 4.837513372786475 4.837513372786475 19.420080530223128 0 0.2742275032520141 0.0 0.0 0.4247425010840047 {[RE]|[WV]}PH{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L};{[RE]|[WV]}[MT][KT]K{I|L} 2.1274;0.19611 -;- 74 + 1 1.479 95198.8 1.0 4251 5262 9500 HBL1_DMSO_200M_050219_1,9515 HBL1_DMSO_200M_050219_1,9515,VADPHNLKI False True VADPHNLKI 49.742586 336.193530261517 2745127.75 9500.0 ENSG00000115042|ENST00000233379|FAHD2A;;ENST00000463096.5_1_2:97749678-97751586:-|nuORF;;ENST00000470100.1_1_2:96076623-96078518:+|nuORF;;ENSG00000144199|ENST00000414820|FAHD2B;;ENST00000607780.5_1_2:96676383-96687353:+|nuORF 3.799214839935303 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9516 49.746 187.0 313900.0 25 0 26165.0 + 36288 SYHVSAQNL 9 114 509.7513833180351 1017.4882137028702 2 509.7519103884697 MULTI CID FTMS 0 0 0 9500 427135.71875 1.0 0 0.0 16 Unmodified _SYHVSAQNL_ ENSG00000070718|ENST00000396926|AP3M2 46.020951573049366 0.0490941689151868 3 [AG]VC(Carbamidomethyl (C))VSAQN{I|L} 10 4 + 50.985 0.0 0.0 5.0108 5.0108 72.894 0.0 0.0 0.0 0.3890968859779775 2.9794656189555013 0.3890968859779775 0.3890968859779775 0 0.5994850021680094 1.0969100130080565 0.8252574989159953 0.0 [AG]VC(Carbamidomethyl (C))VSAQN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}C(Carbamidomethyl (C))VSAQN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AHHAQN{I|L};[AG]VC(Carbamidomethyl (C))VSA[AG]N{I|L};[AG]V[CG]VSAQN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}C(Carbamidomethyl (C))VSA[AG]N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[CG]VSAQN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AHHA[AG]N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[DG]SSAQN{I|L};[AG]V[CG]VSA[AG]N{I|L} 5.0108;4.9726;4.4114;4.1101;4.1101;4.0676;4.0676;3.5064;3.3028;3.213 -;-;-;-;-;-;-;-;-;- 441 1 1.479 51263.0 1.0 4252 5262 9500 HBL1_DMSO_200M_050219_1,9516 HBL1_DMSO_200M_050219_1,9516,SYHVSAQNL True True SYHVSAQNL 49.746188 509.75191038847 2158076.75 9500.0 ENSG00000070718|ENST00000396926|AP3M2 6.789903004964192 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9517 49.755 471.0 381970.0 25 0 53352.0 + -1 CCCVPRCCSQG 11 152 693.7479756464803 1385.4813983597603 2 693.7494384646416 MULTI CID FTMS 0 0 0 9500 394308.125 0.5537100300124873 -2 0.1823883056640625 17 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))CVPRC(Carbamidomethyl (C))C(Carbamidomethyl (C))SQG_ REV__ENSG00000188581|ENST00000306271|KRTAP1-1;REV__ENSG00000221852|ENST00000361883|KRTAP1-5;REV__ENSG00000221880|ENST00000344363|KRTAP1-3 4.5288652416199255 0.8537804541365391 3 VV{M(Oxidation (M))|F}DASS 7 -1 55.114 0.0 0.0 3.978 0.0 0.0 285.0917021701105 392.0752352350219 677.1669374051324 0.0 0.0 0.0 0.0 0 0.0 0.0 2.124803706770636 0.0 VV{M(Oxidation (M))|F}DASS 3.978 - 1394 + 1 1.479 133049.1 1.0 4253 5262 9500 HBL1_DMSO_200M_050219_1,9517 HBL1_DMSO_200M_050219_1,9517,CCCVPRCCSQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9518 49.756 81.0 324160.0 25 0 18922.0 + 35043 SQSATEVRL 9 67 495.7631430879814 989.5117332427628 2 495.7633849978447 MULTI CID FTMS 0 0 0 9500 401464.25 1.0 0 0.0 18 Unmodified _SQSATEVRL_ ENSG00000151575|ENST00000696102|TEX9;nc|ENSG00000151575|Q8N6V9-2|TEX9 22.65808497894818 0.2428932432760099 3 {[QS]|[NT]}SATE[R{I|L}]V 9 2 + 28.311 0.0 0.0 2.8611 2.8611 68.088 0.0 0.0 0.0 4.723820138890126 0.8715017571890016 0.8715017571890016 0.8715017571890016 0 0.5 0.0 0.0 0.0 {[QS]|[NT]}SATE[R{I|L}]V;{[QS]|[NT]}SATE[RV]{I|L};{[QS]|[NT]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[R{I|L}]V;{[QS]|[NT]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[RV]{I|L} 2.8611;2.773;0.6157;0.52763 -;+;-;- + 42 + 1 1.479 27104.4 1.0 4254 5262 9500 HBL1_DMSO_200M_050219_1,9518 HBL1_DMSO_200M_050219_1,9518,SQSATEVRL False True SQSATEVRL 49.756376 495.763384997845 1543535.625 9500.0 ENSG00000151575|ENST00000696102|TEX9;;nc|ENSG00000151575|Q8N6V9-2|TEX9 5.231577396392822 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9519 49.765 513.0 238300.0 25 0 32336.0 + 39179 TYQAMVHEL 9 148 554.2603996899592 1106.5062464467185 2 554.2609130740166 MULTI CID FTMS 0 0 0 9500 317688.78125 1.0 0 0.0 19 Oxidation (M) _TYQAM(Oxidation (M))VHEL_ ENSG00000136631|ENST00000644510|VPS45;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;nc|ENSG00000136631|Q9NRW7-2|VPS45 64.23631603340823 0.0237365939569086 3 [YT]QA{M(Oxidation (M))|F}V[H{I|L}]E 9 2 + 56.82 0.0 0.0 5.1351 5.1351 76.607 0.0 0.0 0.0 18.65689864563112 2.3038894009647137 2.3038894009647137 2.3038894009647137 0 0.4247425010840047 2.0 1.3556270500406935 0.5 [YT]QA{M(Oxidation (M))|F}V[H{I|L}]E;[YT]QA{M(Oxidation (M))|F}E[HV]{I|L};[YT]QA{M(Oxidation (M))|F}E[H{I|L}]V;[YT][AG]A{M(Oxidation (M))|F}V[H{I|L}]E;[YT]Q[YE]VHAP;[YT][AG]A{M(Oxidation (M))|F}E[HV]{I|L};[YT]{[C(Carbamidomethyl (C))E]|[WC]}R[H{I|L}]E;[HV]SV[YE]Q[{M(Oxidation (M))|F}V];[HV]SV{I|L}DQ{M(Oxidation (M))|F}Y;[YT]QATY[{M(Oxidation (M))|F}T]{I|L} 5.1351;4.9269;4.5745;3.8511;3.6497;3.6428;3.6223;3.449;3.3469;3.3401 -;-;-;-;-;-;-;-;-;- 2994 + 1 1.479 94982.6 1.0 4255 5262 9500 HBL1_DMSO_200M_050219_1,9519 HBL1_DMSO_200M_050219_1,9519,TYQAMVHEL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9520 49.775 571.0 169020.0 25 0 28593.0 + 9138 FFRERQETL 9 128 613.3206112935117 1224.6266696538232 2 613.3197509646416 MULTI CID FTMS 0 0 0 9500 236599.859375 1.0 0 0.0 20 Unmodified _FFRERQETL_ ENSG00000120278|ENST00000696526|PLEKHG1 24.020572477871973 0.2255576514309169 3 {[QG]|[NA]}V{I|L}V{[YD]|[{M(Oxidation (M))|F}M]}RY{I|L} 10 9 + 24.288 0.0 0.0 1.9833 1.9833 48.816 0.0 0.0 0.0 0.0 7.095690636129888 0.0 0.0 0 0.1677353201839438 0.0 0.0 0.6747425010840047 {[QG]|[NA]}V{I|L}V{[YD]|[{M(Oxidation (M))|F}M]}RY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}V{[YD]|[{M(Oxidation (M))|F}M]}RY{I|L};{[QG]|[NA]}V{I|L}[{M(Oxidation (M))|F}T]ERY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}[{M(Oxidation (M))|F}T]ERY{I|L};{[VA]|[{I|L}G]}N{I|L}V{[YD]|[{M(Oxidation (M))|F}M]}RY{I|L};{[VA]|[{I|L}G]}GG{I|L}V{[YD]|[{M(Oxidation (M))|F}M]}RY{I|L};{[QG]|[NA]}V{I|L}{[ES]|[DT]|[{I|L}C]}{[WN]|[YH]}[RH];{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}{[ES]|[DT]|[{I|L}C]}{[WN]|[YH]}[RH];{[VA]|[{I|L}G]}GG{I|L}[{M(Oxidation (M))|F}T]ERY{I|L};{[VA]|[{I|L}G]}N{I|L}[{M(Oxidation (M))|F}T]ERY{I|L} 1.9833;1.9833;1.4542;1.4542;1.3334;1.1746;0.8913;0.8913;0.84968;0.80435 -;-;-;-;-;-;-;-;-;- 686 1 1.479 76291.6 1.0 4256 5262 9500 HBL1_DMSO_200M_050219_1,9520 HBL1_DMSO_200M_050219_1,9520,FFRERQETL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9522 49.78 69.0 1255700.0 25 0 222460.0 -1 0 63 966.4326234561798 1930.85069397916 2 966.4332153201104 MULTI CID FTMS 0 0 0 9521 1255336.875 0.6605299685687894 1 -0.1510696411132812 1 3 {I|L}TNQ 4 -1 17.691 0.0 0.0 0.91622 0.0 0.0 1117.4248039418533 354.1675674835617 1471.592371425415 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 {I|L}TNQ 0.91622 - 117 + 1 1.479 66490.0 1.0 4257 5263 9521 HBL1_DMSO_200M_050219_1,9522 HBL1_DMSO_200M_050219_1,9522, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9523 49.786 367.0 339560.0 25 0 26828.0 + 30266 QYLYLWEQERQ 11 95 778.3790603227214 1554.7435677122428 2 778.3795654177666 MULTI CID FTMS 0 0 0 9521 313337.71875 0.324608343608317 2 -0.24041748046875 2 Unmodified _QYLYLWEQERQ_ REV__ENST00000490682.5_1_2:202105031-202105169:+|nuORF 2.9952420565917617 0.861016188266951 3 [YQ]{I|L}GGEYG[EP]AH 12 -1 81.314 0.0 0.0 5.2301 0.0 0.0 0.0 250.1200812990227 250.1200812990227 62.07166240564791 0.0 0.0 0.0 0 2.5669015600442577 0.9208187539523752 0.0 0.2614393726401688 [YQ]{I|L}GGEYG[EP]AH 5.2301 - 6783 1 1.479 89268.8 1.0 4258 5263 9521 HBL1_DMSO_200M_050219_1,9523 HBL1_DMSO_200M_050219_1,9523,QYLYLWEQERQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9524 49.787 23.0 2655400.0 25 0 288860.0 + 43111 VYPDGIRHI 9 64 535.2930364672696 1068.5715200013392 2 535.2927734255791 MULTI CID FTMS 0 0 0 9521 2061479.875 0.6799403516792035 -1 0.05810546875 3 Unmodified _VYPDGIRHI_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 36.12702656103203 0.0967173616627612 3 VYPD{[VA]|[{I|L}G]}RH{I|L} 9 0 + 62.669 0.0 0.0 5.8648 5.8648 91.28 0.0 0.0 0.0 50.88669932286068 9.463728584247626 9.463728584247626 40.82950791653676 0 0.4247425010840047 2.0 0.0 0.3252574989159953 + + VYPD{[VA]|[{I|L}G]}RH{I|L};[YV]{I|L}{M(Oxidation (M))|F}[RK]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.8648;2.0438 +;- + 81 + 1 1.479 52669.7 1.0 4259 5263 9521 HBL1_DMSO_200M_050219_1,9524 HBL1_DMSO_200M_050219_1,9524,VYPDGIRHI True True VYPDGIRHI 49.787484 535.292773425579 155531368.0 9521.0 ENST00000568291.2_1_16:70588380-70590279:+|nuORF;;ENSG00000189091|ENST00000302516|SF3B3 6.201253414154053 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9525 49.79 113.0 871010.0 25 0 62846.0 -1 VLATREMYEL 10 89 414.21430180811774 1239.6210760245533 3 414.2140685915947 MULTI CID FTMS 0 0 0 9521 869651.1875 1.0 0 0.0 4 Oxidation (M) _VLATREM(Oxidation (M))YEL_ ENSG00000174123|ENST00000308973|TLR10 14.95716135407024 0.5965753712453801 3 VA 2 -1 28.698 0.0 0.0 2.3151 0.0 0.0 0.0 1066.4902231581211 1066.4902231581211 11.263426350257188 0.0 0.0 0.0 0 0.4163865622122673 0.958607314841775 0.0 0.0 VA 2.3151 - 31 + 1 1.479 80348.0 1.0 4260 5263 9521 HBL1_DMSO_200M_050219_1,9525 HBL1_DMSO_200M_050219_1,9525,VLATREMYEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9526 49.798 443.0 288390.0 25 0 29460.0 -1 0 105 607.3453617764663 606.3380853098663 1 607.3456909060478 MULTI CID FTMS 0 0 0 9521 377973.375 0.6049843296220412 1 -0.1510696411132812 5 3 [{M(Oxidation (M))|F}V]AATV 6 -1 + 61.942 0.0 0.0 10.216 10.216 91.367 0.0 0.0 0.0 18.421044064971348 16.197887582883936 16.197887582883936 5.691154510433108 0 0.7059771852360797 1.5228787452803376 0.4247425010840047 0.0 [{M(Oxidation (M))|F}V]AATV;[{M(Oxidation (M))|F}V]ATAV;[VG]SV{M(Oxidation (M))|F}V;[TA]AV{M(Oxidation (M))|F}V;[VG]S{M(Oxidation (M))|F}VV;[TA]VA{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}V][SG]VV;[TA]A{M(Oxidation (M))|F}VV;[TA]V{M(Oxidation (M))|F}AV;{[QD]|[EN]|[WG]|[KD]|[RS]}V{M(Oxidation (M))|F}V 10.216;9.2772;7.1777;6.9294;6.7139;6.5342;6.4954;6.4656;5.7197;5.4237 -;-;-;-;-;-;-;-;-;- 380 1 1.479 100775.0 1.0 4261 5263 9521 HBL1_DMSO_200M_050219_1,9526 HBL1_DMSO_200M_050219_1,9526, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9527 49.806 493.0 357280.0 25 0 16506.0 28283 PRLTYKTV 8 157 489.2932190630981 976.5718851929962 2 489.2935668826103 MULTI CID FTMS 0 0 0 9521 340989.3125 0.2277207535155284 -3 0.2404937744140625 6 Unmodified _PRLTYKTV_ ENSG00000147416|ENST00000276390|ATP6V1B2;ENST00000523482.5_1_8:20054917-20070443:+|nuORF 32.30548876998284 0.3644845974844379 3 [R{I|L}]PPP[TP]TV 9 6 + 55.631 0.0 0.0 5.6965 5.6965 87.872 0.0 0.0 0.0 15.228565885290337 42.63580376184177 15.228565885290337 10.496812376923046 0 1.6936726795685342 0.958607314841775 0.8807196863200843 0.0 [R{I|L}]PPP[TP]TV;[R{I|L}]PPP{[VA]|[{I|L}G]}EV;[{I|L}P]RPP[TP]TV;[R{I|L}][YK][TP]TV;[{I|L}P]RPP{[VA]|[{I|L}G]}EV;[R{I|L}][YK]{[VA]|[{I|L}G]}EV;[R{I|L}][YG][K{I|L}]EV;{[HG]|PP}[R{I|L}]P[TP]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV][K{I|L}]EV;[VP][HK]V[TP]TV 5.6965;4.6217;4.067;3.3524;2.9921;2.2775;2.2775;1.0708;0.66357;0.44546 -;-;-;-;-;-;-;-;-;- 730 1 1.479 134837.0 1.0 4262 5263 9521 HBL1_DMSO_200M_050219_1,9527 HBL1_DMSO_200M_050219_1,9527,PRLTYKTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9528 49.816 546.0 174450.0 25 0 19827.0 6406 DYRWPMRYDQW 11 79 808.3597198814706 1614.704886829741 2 808.3591186404228 MULTI CID FTMS 0 0 0 9521 331448.8125 1.0 0 0.0 7 Unmodified _DYRWPMRYDQW_ ENSG00000126107|ENST00000372172|HECTD3;nc|ENSG00000126107|Q5T447-2|HECTD3 1.0714618166137932 0.8700927088084459 3 {M(Oxidation (M))|F}ANQQAE[HA]YQ 11 11 84.712 0.0 0.0 5.2463 0.0 0.0 309.1344670220438 0.0 309.1344670220438 0.0 73.28518599913568 0.0 0.0 0 0.4247425010840047 0.0 0.0 1.9731975075880328 {M(Oxidation (M))|F}ANQQAE[HA]YQ 5.2463 - 1715 + 1 1.479 69509.3 1.0 4263 5263 9521 HBL1_DMSO_200M_050219_1,9528 HBL1_DMSO_200M_050219_1,9528,DYRWPMRYDQW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9529 49.827 612.0 222260.0 25 0 16115.0 + 16249 IVRDHWVHV 9 149 387.54894668067647 1159.6250106422294 3 387.5486328005791 MULTI CID FTMS 0 0 0 9521 316490.875 1.0 0 0.0 8 Unmodified _IVRDHWVHV_ ENSG00000183648|ENST00000605997|NDUFB1;ENST00000435191.1_1_3:48223039-48223213:+|nuORF;nc|ENSG00000183648|O75438-2|NDUFB1 26.268140514670165 0.1969607489560049 3 PHWVHV 6 4 31.164 0.0 0.0 2.6874 0.0 0.0 386.2329319229325 0.0 386.2329319229325 0.0 14.163865622122668 0.0 0.0 0 1.3539171939081172 0.0 0.0 0.0 PHWVHV 2.6874 - 1042 1 1.479 110956.1 1.0 4264 5263 9521 HBL1_DMSO_200M_050219_1,9529 HBL1_DMSO_200M_050219_1,9529,IVRDHWVHV False True IVRDHWVHV 49.826728 387.548632800579 1494959.25 9521.0 ENST00000435191.1_1_3:48223039-48223213:+|nuORF;;ENSG00000183648|ENST00000605997|NDUFB1;;nc|ENSG00000183648|O75438-2|NDUFB1 4.378948211669922 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9530 49.838 648.0 461550.0 25 0 43152.0 + 10002 FPKRRELQI 9 186 396.2399087074488 1185.6978967225464 3 396.2394286990166 MULTI CID FTMS 0 0 0 9521 265026.53125 0.4131922689331762 1 -0.1510696411132812 9 Unmodified _FPKRRELQI_ ENSG00000126391|ENST00000317568|FRMD8;nc|ENSG00000126391|Q9BZ67-2|FRMD8;nc|ENSG00000126391|Q9BZ67-3|FRMD8 16.565877749689598 0.3882643987948875 3 {M(Oxidation (M))|F}{I|L}E 3 7 38.958 0.0 0.0 3.2856 0.0 0.0 0.0 793.4809487764477 793.4809487764477 7.61439372640169 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3807196863200844 0.0 {M(Oxidation (M))|F}{I|L}E 3.2856 - 95 + 1 1.479 232018.0 1.0 4265 5263 9521 HBL1_DMSO_200M_050219_1,9530 HBL1_DMSO_200M_050219_1,9530,FPKRRELQI False True FPKRRELQI 49.838009 396.239428699017 6562486.5 9521.0 nc|ENSG00000126391|Q9BZ67-3|FRMD8;;ENSG00000126391|ENST00000317568|FRMD8;;nc|ENSG00000126391|Q9BZ67-2|FRMD8 3.820194403330485 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9531 49.847 516.0 127670.0 25 0 11286.0 + 11851 GLSEEEQLERA 11 92 630.8077700964345 0 630.8076049685478 PEAK CID FTMS 0 0 0 9521 274461.625 1.0 0 0.0 10 Unmodified _GLSEEEQLERA_ ENSG00000144468|ENST00000392062|RHBDD1;ENST00000473218.5_1_2:227771569-227779114:+|nuORF;ENST00000491490.5_1_2:227771589-227860235:+|nuORF;ENST00000493526.1_1_2:227773206-227860235:+|nuORF;nc|ENSG00000144468|Q8TEB9-2|RHBDD1 59.05245873256422 0.0175464156431399 3 SEEEQ{I|L}E 7 4 62.344 0.0 0.0 4.9495 0.0 0.0 170.10481083863198 242.12629114322505 412.231101981857 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 1.5629529932484498 0.0 + SEEEQ{I|L}E 4.9495 + + 402 + 1 1.479 54099.2 1.0 4266 5263 9521 HBL1_DMSO_200M_050219_1,9531 HBL1_DMSO_200M_050219_1,9531,GLSEEEQLERA True True GLSEEEQLERA 49.847111 630.807604968548 1511994.25 9521.0 ENST00000473218.5_1_2:227771569-227779114:+|nuORF;;ENST00000491490.5_1_2:227771589-227860235:+|nuORF;;ENST00000493526.1_1_2:227773206-227860235:+|nuORF;;ENSG00000144468|ENST00000392062|RHBDD1;;nc|ENSG00000144468|Q8TEB9-2|RHBDD1 7.400302886962891 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9532 49.859 605.0 253280.0 25 0 23494.0 -1 KDSTAWMEQFY 11 148 711.3069763201012 1420.5993997070022 2 711.3066894412041 MULTI CID FTMS 0 0 0 9521 207418.15625 0.0051876456865525 13 -1.1180191040039062 11 Oxidation (M) _KDSTAWM(Oxidation (M))EQFY_ ENSG00000171804|ENST00000447313|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;nc|ENSG00000171804|Q6ZQQ6|WDR87 15.248480904072842 0.7179608125786238 3 [QA]HDEAQNAGA{M(Oxidation (M))|F}Y 13 -1 + 70.34 0.0 0.0 4.9514 4.9514 73.475 0.0 0.0 0.0 1.9457079410427127 7.460706598876094 1.9457079410427127 0.7968969065610167 0 0.8935078169319297 0.0 0.2396518287104437 1.8243923658886183 [QA]HDEAQNAGA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HS]NQNAGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HS]NQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAGANAGA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAGAQGGA{M(Oxidation (M))|F}Y;AAGHDEAQNAGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HS]NQNAGA{M(Oxidation (M))|F}Y 4.9514;4.8953;4.8144;4.7583;4.6958;4.6877;4.6397;4.6316;4.5849;4.563 -;-;-;-;-;-;-;-;-;- 12753 1 1.479 112413.6 1.0 4267 5263 9521 HBL1_DMSO_200M_050219_1,9532 HBL1_DMSO_200M_050219_1,9532,KDSTAWMEQFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9533 49.871 700.0 145900.0 25 0 8701.7 + -1 FCVCFFKFPFY 11 126 781.3551223783503 1560.6956918235005 2 781.3573486208916 MULTI CID FTMS 0 0 0 9521 200569.515625 1.0 0 0.0 12 2 Carbamidomethyl (C) _FC(Carbamidomethyl (C))VC(Carbamidomethyl (C))FFKFPFY_ REV__ENST00000474340.1_1_9:95003027-95004705:-|nuORF 6.2057823575117 0.8458686499021061 3 {[QN]|[E{I|L}]|[KN]}AQA[HA]AQQNA{M(Oxidation (M))|F}Y 14 -1 + 70.733 0.0 0.0 4.5322 4.5322 71.929 0.0 0.0 0.0 2.8523572848074963 9.999547704136448 2.8523572848074963 0.6692371679556146 0 0.7429928190999391 0.0 0.0 2.571333751784365 {[QN]|[E{I|L}]|[KN]}AQA[HA]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGAA[HA]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQA[HA]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGAA[HA]AQQNA{M(Oxidation (M))|F}Y;QQGQA[HA]AQQNA{M(Oxidation (M))|F}Y;QQGGAA[HA]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}QAA[HA]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QQA[HA]AQQNA{M(Oxidation (M))|F}Y;QQANA[HA]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}AGQA[HA]AQQNA{M(Oxidation (M))|F}Y 4.5322;4.4893;4.3494;4.3078;4.26;4.2171;4.1424;4.1136;4.0871;4.0772 -;-;-;-;-;-;-;-;-;- 6734 1 1.479 74108.1 1.0 4268 5263 9521 HBL1_DMSO_200M_050219_1,9533 HBL1_DMSO_200M_050219_1,9533,FCVCFFKFPFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9534 49.885 800.0 474740.0 25 0 21677.0 + 23000 LSHFVIQVR 9 347 366.8860921038196 1097.6364469116588 3 367.5565063357353 MULTI CID FTMS 0 0 0 9521 168746.828125 0.2901147608114641 4 -0.4368438720703125 13 Unmodified _LSHFVIQVR_ ENST00000329286.6_1_18:8638280-8638382:+|nuORF 21.74664581756881 0.2544899275067181 3 Q{I|L}NEV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}GV 10 6 + 28.541 0.0 0.0 2.6003 2.6003 76.392 0.0 0.0 0.0 7.286979186771102 1.7960584023554595 1.7960584023554595 7.68954998148708 0 -0.0284858380767091 0.0 0.3252574989159953 0.3054621874040891 Q{I|L}NEV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}GV;Q{I|L}[WR]{I|L}{I|L}[RN];Q{I|L}GGEV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}GV;Q{I|L}[WR]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}GV;Q{I|L}[WR]{I|L}[RN]{I|L};Q{I|L}[{I|L}A][RD]{I|L}[RN];Q{I|L}PVV[C(Carbamidomethyl (C))R]KV;Q{I|L}[{I|L}A][RV]E[RN];{[DA]|[EG]}[R{I|L}]{I|L}{I|L}TV[TP];Q{I|L}PVVV{[C(Carbamidomethyl (C))G]|[NC]}KV 2.6003;1.8997;1.7653;1.3463;1.3195;1.2343;0.93498;0.8991;0.66966;0.58132 -;-;-;-;-;-;-;-;-;- 1623 + 1 1.479 295649.1 0.9300000071525574 4269 5263 9521 HBL1_DMSO_200M_050219_1,9534 HBL1_DMSO_200M_050219_1,9534,LSHFVIQVR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9535 49.899 731.0 280170.0 25 0 12051.0 -1 CCLWNTTV 8 220 498.7186084054316 0 498.7194091677666 PEAK CID FTMS 0 0 0 9521 139384.25 1.0 0 0.0 14 Carbamidomethyl (C) _C(Carbamidomethyl (C))CLWNTTV_ ENSG00000138315|ENST00000334011|OIT3;nc|ENSG00000138315|Q8WWZ8-2|OIT3 9.347437153973935 0.5488964601725408 3 SP 2 -1 5.9691 0.0 0.0 0.59965 0.0 0.0 181.9883509887944 626.3302706354124 808.3186216242068 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SP 0.59965 - 184 + 1 1.479 155248.7 1.0 4270 5263 9521 HBL1_DMSO_200M_050219_1,9535 HBL1_DMSO_200M_050219_1,9535,CCLWNTTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9536 49.913 800.0 273630.0 25 0 12908.0 + 23482 LTHTEPEH 8 205 482.2282297947099 962.4419066562198 2 482.2277404665947 MULTI CID FTMS 0 0 0 9521 132895.734375 0.5279430670208664 7 -0.7135543823242188 15 Unmodified _LTHTEPEH_ REV__ENSG00000170325|ENST00000360871|PRDM10;REV__nc|ENSG00000170325|Q9NQV6-1|PRDM10;REV__nc|ENSG00000170325|Q9NQV6-2|PRDM10;REV__nc|ENSG00000170325|Q9NQV6-5|PRDM10;REV__nc|ENSG00000170325|Q9NQV6-6|PRDM10;REV__nc|ENSG00000170325|Q9NQV6-7|PRDM10;REV__nc|ENSG00000170325|Q9NQV6|PRDM10 13.50788311687929 0.7113601687236069 3 [{I|L}T]H 3 -1 24.844 0.0 0.0 2.5813 0.0 0.0 0.0 608.2253362190469 608.2253362190469 12.625305739907809 0.0 0.0 0.0 0 0.0 2.0 0.2396518287104437 0.0 [{I|L}T]H 2.5813 + + 903 1 1.479 166944.4 0.949999988079071 4271 5263 9521 HBL1_DMSO_200M_050219_1,9536 HBL1_DMSO_200M_050219_1,9536,LTHTEPEH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9537 49.926 800.0 49423.0 25 0 2161.6 25284 MYTSKDRYFYF 11 79 760.8452636599541 0 760.8452636599541 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _MYTSKDRYFYF_ ENSG00000162078|ENST00000382280|ZG16B 1.4819007175156935 0.4761840153648598 3 DQQA 4 10 15.394 0.0 0.0 1.013 0.0 0.0 399.1869869981538 675.2722872369749 1074.4592742351288 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DQQA 1.013 - 94 + 1 1.479 35613.3 0.9200000166893004 4272 5263 9521 HBL1_DMSO_200M_050219_1,9537 HBL1_DMSO_200M_050219_1,9537,MYTSKDRYFYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9539 49.931 19.0 2695900.0 25 0 494590.0 + 42592 VTRKPEVV 8 72 464.28466961522446 926.5547862972488 2 464.2847778201103 MULTI CID FTMS 0 0 0 9538 3499527.5 0.6136369235560292 1 -0.0893478393554687 1 Unmodified _VTRKPEVV_ REV__ENST00000396326.2_1_10:30807341-30807599:-|nuORF;REV__ENST00000457695.2_1_X:100110922-100111255:-|nuORF 13.50788311687929 0.7113601687236069 3 S{I|L} 2 -1 21.211 0.0 0.0 2.2893 0.0 0.0 708.4274344679505 0.0 708.4274344679505 0.0 0.0134875797167666 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 S{I|L} 2.2893 - 69 + 1 1.469 45858.9 1.0 4273 5264 9538 HBL1_DMSO_200M_050219_1,9539 HBL1_DMSO_200M_050219_1,9539,VTRKPEVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9540 49.932 34.0 1198000.0 25 0 95547.0 + 13023 HASQPSLTV 9 75 470.2484443846493 938.4823358360984 2 470.2485534548759 MULTI CID FTMS 0 0 0 9538 1497200.625 0.1058523279336555 9 -0.7362861633300781 2 Unmodified _HASQPSLTV_ ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000175387|Q15796-2|SMAD2 49.93300154707207 0.0405168250806675 3 [HA]{[QS]|[NT]}[PS]{I|L}TV 9 0 + 50.837 0.0 0.0 5.4169 5.4169 77.182 0.0 0.0 0.0 8.207480099788427 16.478174818886373 8.207480099788427 1.989700043360188 0 0.5 1.2218487496163564 1.3494850021680094 0.0 + + [HA]{[QS]|[NT]}[PS]{I|L}TV;[HA]{[QS]|[NT]}V[TP]TV;{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}TV;{[TV]|[{I|L}S]}[TP]A[HN]TV;[{I|L}T][PS]A[HN]TV 5.4169;5.2049;4.5424;3.0559;1.8798 +;-;-;-;- + 148 1 1.469 41855.7 1.0 4274 5264 9538 HBL1_DMSO_200M_050219_1,9540 HBL1_DMSO_200M_050219_1,9540,HASQPSLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9541 49.933 24.0 2243700.0 25 0 486520.0 + 6372 DVYESSVKV 9 71 513.2614016930279 1024.5082504528557 2 513.2615844607353 MULTI CID FTMS 0 0 0 9538 2613702.25 1.0 0 0.0 3 Unmodified _DVYESSVKV_ ENSG00000042429|ENST00000251871|MED17 43.77239144664712 0.0547478964384323 3 [DV]YESSVKV 9 0 + 79.636 0.0 0.0 7.7731 7.7731 97.355 0.0 0.0 0.0 52.18871842451149 10.74753464049519 10.74753464049519 79.63599337347843 0 0.805462187404089 2.0 0.7302046884880937 0.2887254899964357 + + [DV]YESSVKV 7.7731 + + 98 + 1 1.469 48287.8 1.0 4275 5264 9538 HBL1_DMSO_200M_050219_1,9541 HBL1_DMSO_200M_050219_1,9541,DVYESSVKV True True DVYESSVKV 49.933069 513.261584460735 40572204.0 9538.0 ENSG00000042429|ENST00000251871|MED17 7.852115154266357 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9542 49.934 32.0 2337500.0 25 0 259920.0 + 39213 TYVTPRRPF 9 75 379.5452557090981 1135.6139377274944 3 379.5450622439384 MULTI CID FTMS 0 0 0 9538 2236777.25 0.8450433104213245 -2 0.2091751098632812 4 Unmodified _TYVTPRRPF_ ENSG00000170889|ENST00000302907|RPS9;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 36.12702656103203 0.0967173616627612 3 TYVT 4 5 51.472 0.0 0.0 4.5325 0.0 0.0 0.0 668.3637718520071 668.3637718520071 43.51342204748164 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.3807196863200844 0.0 + TYVT 4.5325 + + 52 + 1 1.469 67815.0 1.0 4276 5264 9538 HBL1_DMSO_200M_050219_1,9542 HBL1_DMSO_200M_050219_1,9542,TYVTPRRPF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9543 49.936 50.0 1980000.0 25 0 199940.0 + 24969 MPPPPPQGV 9 115 460.2385793050109 918.462605676822 2 460.2384826540947 MULTI CID FTMS 0 0 0 9538 1739058.875 0.0577695015461372 41 -3.83660888671875 5 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 78.44472497914707 0.017893573946697 3 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 54.409 0.0 0.0 5.9239 5.9239 89.044 0.0 0.0 0.0 11.897969316958502 10.924778212679485 10.924778212679485 11.897969316958502 0 1.5044321917401078 0.7695510786217261 0.3252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;[VG]EHPPQR;[PS]THPPQR;[VG]EPHPQR;{[HG]|PP}NNPPQR;[PS]TPHPQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;{[HG]|PP}NGGPPQR;{[HG]|PP}GGNPPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR 5.9239;4.6285;3.7434;3.6945;3.6139;2.8094;2.7652;2.6055;2.6055;2.2811 -;-;-;-;-;-;-;-;-;- 521 1 1.469 82369.6 1.0 4277 5264 9538 HBL1_DMSO_200M_050219_1,9543 HBL1_DMSO_200M_050219_1,9543,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9544 49.937 78.0 888630.0 25 0 122630.0 -1 0 84 336.72382896560026 671.4331049980005 2 336.7235900759697 MULTI CID FTMS 0 0 0 9538 1003349.1875 0.729795146587404 -2 0.2091751098632812 6 3 {[VA]|[{I|L}G]}{I|L}{I|L}TR 6 -1 + 46.243 0.0 0.0 6.8872 6.8872 93.355 0.0 0.0 0.0 35.78527915737599 6.131779024128257 6.131779024128257 19.81045001851292 0 0.4247425010840047 2.0 0.25 0.0 {[VA]|[{I|L}G]}{I|L}{I|L}TR;[{I|L}A]V{I|L}TR 6.8872;3.9367 -;- 88 + 1 1.469 61357.0 1.0 4278 5264 9538 HBL1_DMSO_200M_050219_1,9544 HBL1_DMSO_200M_050219_1,9544, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9545 49.939 73.0 482100.0 25 0 48236.0 7500 EGYMPVPNF 9 67 527.238406153333 1052.462259373466 2 528.2424804568291 MULTI CID FTMS 0 0 0 9538 1003783.3125 0.0493469028183164 8 -0.6853179931640625 7 Unmodified _EGYMPVPNF_ ENSG00000132464|ENST00000396073|ENAM 7.910154910731844 0.6385446671287552 3 T{M(Oxidation (M))|F} 2 8 17.747 0.0 0.0 1.6863 0.0 0.0 786.3351974611597 0.0 786.3351974611597 0.0 7.570071809000609 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 T{M(Oxidation (M))|F} 1.6863 - 99 + 1 1.469 33873.9 1.0 4279 5264 9538 HBL1_DMSO_200M_050219_1,9545 HBL1_DMSO_200M_050219_1,9545,EGYMPVPNF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9546 49.941 71.0 1169600.0 25 0 125170.0 + 16542 KAWEGLHENSV 11 108 635.3148958787929 1268.6152388243856 2 635.3150512576103 MULTI CID FTMS 0 0 0 9538 847663.875 1.0 0 0.0 8 Unmodified _KAWEGLHENSV_ chr12:8604892-8605215|31|16.84|0.02|9.9|-|ENST00000537228|AICDA,AICDA;ENSG00000111732|ENST00000229335|AICDA;ENST00000545576.1_1_12:8756882-8757648:-|nuORF;nc|ENSG00000111732|Q9GZX7-2|AICDA 81.5517419942261 0.0065026061097209 3 KAWE{[VA]|[{I|L}G]}HENSV 11 0 + 62.229 0.0 0.0 4.9053 4.9053 81.952 0.0 0.0 0.0 7.305906063131729 7.305906063131729 7.305906063131729 7.305906063131729 0 2.837180496500464 0.0 0.9392404878284264 1.6039171939081172 + + KAWE{[VA]|[{I|L}G]}HENSV;[NS]V{NN|[MP]|[D{I|L}]|[EV]}RHENSV;[H{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}RHENSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RD]RHENSV;[KA]WE{[VA]|[{I|L}G]}HENSV;[NS]V{NN|[MP]|[D{I|L}]|[EV]}RHEGGSV;[NS]V{NN|[MP]|[D{I|L}]|[EV]}PE[VP]NSV;[H{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}RHEGGSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RD]RHEGGSV;[NS]V{NN|[MP]|[D{I|L}]|[EV]}P[VP]ENSV 4.9053;4.3294;3.88;3.7253;3.6728;3.6098;3.4814;3.1576;3.0029;2.9784 +;-;-;-;+;-;-;-;-;- + 1001 + 1 1.469 71392.6 1.0 4280 5264 9538 HBL1_DMSO_200M_050219_1,9546 HBL1_DMSO_200M_050219_1,9546,KAWEGLHENSV True True KAWEGLHENSV 49.940739 635.31505125761 11294687.0 9538.0 chr12:8604892-8605215|31|16.84|0.02|9.9|-|ENST00000537228|AICDA,AICDA;;nc|ENSG00000111732|Q9GZX7-2|AICDA;;ENSG00000111732|ENST00000229335|AICDA;;ENST00000545576.1_1_12:8756882-8757648:-|nuORF 6.927878538767497 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9547 49.943 99.0 1714500.0 25 0 183180.0 + 26817 PAPPPPQPL 9 135 457.2609047129245 912.507256492649 2 457.2610961794853 MULTI CID FTMS 0 0 0 9538 807780.375 0.5519280542457745 -3 0.282318115234375 9 Unmodified _PAPPPPQPL_ ENST00000317173.8_1_8:9911977-10102635:+|nuORF;ENST00000441698.6_1_8:9911977-10065409:+|nuORF 81.86404211737425 0.017065112157077 3 [PA]PPPP[QP]{I|L} 9 0 + 60.601 0.0 0.0 6.6411 6.6411 90.797 0.0 0.0 0.0 35.78463459467826 1.1270428019128786 1.1270428019128786 10.118926768029048 0 2.2302046884880937 1.6989700043360187 0.0 0.6237125054200234 + + [PA]PPPP[QP]{I|L};[PA]PPPPA[PG]{I|L};[PA]PPPPA[PA]V;[PA][YK]P[QP]{I|L};[KA]YPP[QP]{I|L};[PA]P[YK][QP]{I|L};[PA][YK]PA[PG]{I|L};[PA][YK]PA[PA]V;[KA]YPPA[PG]{I|L};[PA]P[YK]A[PG]{I|L} 6.6411;5.5322;5.4454;3.8275;3.792;3.4696;3.0132;2.9265;2.6771;2.6553 +;-;-;-;-;-;-;-;-;- + 1190 + 1 1.469 131414.3 1.0 4281 5264 9538 HBL1_DMSO_200M_050219_1,9547 HBL1_DMSO_200M_050219_1,9547,PAPPPPQPL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9548 49.945 123.0 1111300.0 25 0 159100.0 + 5756 DPPDGIKV 8 125 420.7266170421713 839.4386811511426 2 420.7265502810478 MULTI CID FTMS 0 0 0 9538 719790.0625 0.2733549792982393 -3 0.282318115234375 10 Unmodified _DPPDGIKV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 43.85829265575387 0.1697421968005898 3 DPPD{[VA]|[{I|L}G]}KV 8 0 + 70.671 0.0 0.0 8.4189 8.4189 86.201 0.0 0.0 0.0 24.28213000078368 5.571268229415637 5.571268229415637 2.8258344212375164 0 0.6861818737241735 2.0 0.4247425010840047 0.2887254899964357 + + DPPD{[VA]|[{I|L}G]}KV;DPVG[EP]KV;DPPD{[VA]|[{I|L}G]}VK;DPVG[EP]VK;DPP[KP]STV;DPPK{[CA]|SS}P{I|L};DPP[KP]SS{I|L};[VS][WR]V{[HG]|PP};D[{I|L}T]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]V;{[ET]|[MV]}V{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]V 8.4189;8.0822;7.7552;7.4186;6.1396;5.6502;5.3697;1.959;1.6148;1.2562 +;-;-;-;-;-;-;-;-;- + 352 + 1 1.469 113203.3 1.0 4282 5264 9538 HBL1_DMSO_200M_050219_1,9548 HBL1_DMSO_200M_050219_1,9548,DPPDGIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9549 49.948 137.0 1096600.0 25 0 92245.0 + 12957 HAHAQIPVV 9 161 486.2739880148469 970.5334230964936 2 486.2740661501884 MULTI CID FTMS 0 0 0 9538 723804.25 0.3534846610449115 2 -0.1817855834960937 11 Unmodified _HAHAQIPVV_ ENSG00000112701|ENST00000447266|SENP6;ENST00000487548.2_1_6:76343389-76344528:+|nuORF;nc|ENSG00000112701|Q9GZR1-2|SENP6 30.22481116460888 0.1466181017706357 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YH{I|L}PVV 8 5 + 42.114 0.0 0.0 4.3392 4.3392 83.202 0.0 0.0 0.0 11.065473235138128 5.484550065040281 5.484550065040281 10.0 0 0.7059771852360797 1.5228787452803376 0.2614393726401688 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YH{I|L}PVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{I|L}HPVV;{[TV]|[{I|L}S]}{I|L}[TA][DG]PVV;{[TV]|[{I|L}S]}{I|L}[TA]QP{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C))R]{I|L}PVV;{[TV]|[{I|L}S]}{I|L}[DG][TA]PVV;{[TV]|[{I|L}S]}{I|L}[DG]KP{[QN]|[E{I|L}]|[KN]};[HA]QAH{I|L}PVV;[HA]HAQ{I|L}PVV;{[TV]|[{I|L}S]}{I|L}[TA][AG]P{[QN]|[E{I|L}]|[KN]} 4.3392;3.3089;3.1991;2.7982;2.7312;2.6313;2.2305;2.0563;1.8956;1.8495 -;-;-;-;-;-;-;-;+;- + 1454 1 1.469 118886.7 1.0 4283 5264 9538 HBL1_DMSO_200M_050219_1,9549 HBL1_DMSO_200M_050219_1,9549,HAHAQIPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9550 49.951 170.0 807090.0 25 0 55060.0 + 12152 GQMDPSAQI 9 139 473.71846283696425 945.4223727407284 2 473.7186157107353 MULTI CID FTMS 0 0 0 9538 663772.625 0.2792426503315459 1 -0.0893478393554687 12 Unmodified _GQMDPSAQI_ ENSG00000164880|ENST00000404767|INTS1;ENST00000493446.1_1_7:1510215-1510538:-|nuORF 66.45667989310934 0.0225072657982126 3 {[QG]|[NA]}MDPSAQ{I|L} 9 0 + 49.255 0.0 0.0 5.2098 5.2098 76.697 0.0 0.0 0.0 2.205368437984632 10.330145895351848 2.205368437984632 2.205368437984632 0 1.1237125054200234 0.638272163982407 0.5 0.9802046884880936 + + {[QG]|[NA]}MDPSAQ{I|L};[AG]GMDPSAQ{I|L};{[QG]|[NA]}MDPTGQ{I|L};[AG]GMDPTGQ{I|L};[AG]G[TP]DMGQ{I|L};[AG]G[TP][EC]AQ{I|L};[PS]AQDMGQ{I|L};[PS]AQ[EC]AQ{I|L};{[SA]|[TG]}PQDMGQ{I|L};{[SA]|[TG]}PQ[EC]AQ{I|L} 5.2098;4.9765;4.3625;4.1293;3.6071;3.5288;3.5089;3.4306;3.3694;3.2911 +;-;-;-;-;-;-;-;-;- + 616 1 1.469 106700.5 1.0 4284 5264 9538 HBL1_DMSO_200M_050219_1,9550 HBL1_DMSO_200M_050219_1,9550,GQMDPSAQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9551 49.953 71.0 955440.0 25 0 63037.0 + 25313 NAGPPSHII 9 115 453.24574919642566 904.4769454596512 2 453.2456542849541 MULTI CID FTMS 0 0 0 9538 596786.125 0.2809002124451383 2 -0.1817855834960937 13 Unmodified _NAGPPSHII_ ENSG00000132128|ENST00000617190|LRRC41;nc|ENSG00000132128|Q15345-3|LRRC41 26.88365393820708 0.1891292719743517 3 {[QG]|[NA]}GP{I|L}RK 7 5 43.593 0.0 0.0 4.8197 0.0 0.0 0.0 165.03095422916252 165.03095422916252 30.61243137115873 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 {[QG]|[NA]}GP{I|L}RK 4.8197 - 597 + 1 1.469 58307.9 1.0 4285 5264 9538 HBL1_DMSO_200M_050219_1,9551 HBL1_DMSO_200M_050219_1,9551,NAGPPSHII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9552 49.955 98.0 407690.0 25 0 43890.0 + 3472 CFRKMRENSV 10 67 423.8786636984523 0 423.8788024783134 PEAK CID FTMS 0 0 0 9538 560267.625 0.879379148814445 -1 0.1510696411132812 14 Unmodified _CFRKMRENSV_ ENSG00000166432|ENST00000651725|ZMAT1;nc|ENSG00000166432|Q5H9K5-2|ZMAT1;nc|ENSG00000166432|Q5H9K5|ZMAT1 15.248480904072842 0.3349989633518451 3 E 1 9 5.4846 0.0 0.0 0.64849 0.0 0.0 581.6313985865547 132.04583154849846 713.6772301350532 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.64849 + + 16 + 1 1.469 40630.1 1.0 4286 5264 9538 HBL1_DMSO_200M_050219_1,9552 HBL1_DMSO_200M_050219_1,9552,CFRKMRENSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9553 49.966 628.0 196740.0 25 0 47410.0 -1 0 48 1158.1412909189787 3471.4020433571363 3 1158.809863269329 MULTI CID FTMS 0 0 0 9538 456432.5625 0.2487209108671745 2 -0.1817855834960937 15 3 YG 2 -1 8.5835 0.0 0.0 0.24726 0.0 0.0 1781.6269711909238 1466.6853027655152 3248.3122739564387 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.24726 - 41 + 1 1.469 107337.1 1.0 4287 5264 9538 HBL1_DMSO_200M_050219_1,9553 HBL1_DMSO_200M_050219_1,9553, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9554 49.976 573.0 883490.0 25 0 62534.0 + 24279 MAREVINRI 9 273 367.8783621820597 1100.613257146379 3 367.8778259158134 MULTI CID FTMS 0 0 0 9538 363571.875 0.2032861688034752 -2 0.2091751098632812 16 Unmodified _MAREVINRI_ ENSG00000196305|ENST00000443024|IARS1 51.487983226225225 0.0371074584807926 3 MA{I|L}RD{I|L}{I|L}NR 9 4 + 80.676 0.0 0.0 7.3301 7.3301 83.842 0.0 0.0 0.0 22.328291049187584 6.068886468797118 6.068886468797118 2.570071809000609 0 0.516375387189108 1.0457574905606752 0.6549471895720984 1.2560180345862424 MA{I|L}RD{I|L}{I|L}NR;MAREV{I|L}{I|L}NR;M{I|L}ARD{I|L}{I|L}NR;MA{I|L}RD{I|L}NR{I|L};MAR{I|L}D{I|L}{I|L}NR;MAREV{I|L}NR{I|L};MA{I|L}RD{I|L}{I|L}GGR;MA{I|L}RD{I|L}N{I|L}R;MAREV{I|L}{I|L}GGR;M{I|L}ARD{I|L}NR{I|L} 7.3301;7.0966;6.7986;6.7787;6.7147;6.5452;6.4935;6.4395;6.26;6.2472 -;-;-;-;-;+;-;-;-;- + 2601 + 1 1.469 403498.6 1.0 4288 5264 9538 HBL1_DMSO_200M_050219_1,9554 HBL1_DMSO_200M_050219_1,9554,MAREVINRI True True MAREVINRI 49.976314 367.877825915813 35501300.25 9538.0 ENSG00000196305|ENST00000443024|IARS1 4.918600082397461 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9555 49.986 572.0 317760.0 25 0 13173.0 2618 ASSLSHAGRHK 11 170 575.8089007506478 1149.6032485680955 2 577.3206664919853 MULTI CID FTMS 0 0 0 9538 291550.4375 0.7382856014186432 5 -0.4679756164550781 17 Unmodified _ASSLSHAGRHK_ ENSG00000104093|ENST00000560891|DMXL2;nc|ENSG00000104093|Q8TDJ6-2|DMXL2;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;nc|ENSG00000104093|Q8TDJ6|DMXL2 17.11289562659939 0.6791789249425932 3 {[TV]|[{I|L}S]}SAS{[MG]|[TS]}V 8 7 39.77 0.0 0.0 3.4595 0.0 0.0 0.0 414.2258431328018 414.2258431328018 16.066205442720843 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.4698565171985374 0.0 {[TV]|[{I|L}S]}SAS{[MG]|[TS]}V 3.4595 - 872 1 1.469 144292.6 1.0 4289 5264 9538 HBL1_DMSO_200M_050219_1,9555 HBL1_DMSO_200M_050219_1,9555,ASSLSHAGRHK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9556 49.997 583.0 587090.0 25 0 49430.0 + 45201 YQVAAAESHPL 11 190 593.2981899963888 1184.5818270595776 2 593.2977783083916 MULTI CID FTMS 0 0 0 9538 284432.03125 0.1856470681436152 -2 0.2091751098632812 18 Unmodified _YQVAAAESHPL_ ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 89.40071534611396 0.0006776708238028 3 [YQ]VA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AVQY 10 6 + 59.97 0.0 0.0 5.0626 5.0626 82.631 0.0 0.0 0.0 3.5281890469922814 11.686608510717946 3.5281890469922814 7.597587594501874 0 1.6595680409956015 1.0 0.0 0.9040461585048922 [YQ]VA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AVQY;[HS]EAAAV[{I|L}P]QY;{[QV]|[N{I|L}]|[RA]|[KV]}[QP]EAAAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GV[YV]AAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GVA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AVQY;[YQ]VA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AV[AG]Y;{[QV]|[N{I|L}]|[RA]|[KV]}A[PG]EAAAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Y{I|L}]AAAAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{I|L}P]QY;[YQ]VAAS[KQ]QY 5.0626;4.4212;4.3744;4.3417;4.3031;4.2889;4.2645;4.2005;4.0827;4.0025 -;-;-;-;-;-;-;-;-;- 4439 1 1.469 249230.3 1.0 4290 5264 9538 HBL1_DMSO_200M_050219_1,9556 HBL1_DMSO_200M_050219_1,9556,YQVAAAESHPL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9557 50.003 259.0 420080.0 25 0 26304.0 + 5556 DMLQVRKV 8 133 494.7852489809529 987.5559450287058 2 494.7843810915947 MULTI CID FTMS 0 0 0 9538 247932.484375 0.7966444564312819 4 -0.3585624694824219 19 Unmodified _DMLQVRKV_ ENSG00000114742|ENST00000302313|WDR48;ENST00000466405.1_1_3:39133106-39135740:+|nuORF;nc|ENSG00000114742|Q8TAF3-2|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48;nc|ENSG00000114742|Q8TAF3-5|WDR48 32.78568957990786 0.3549862272178655 3 DM{I|L}QVRKV 8 0 + 82.644 0.0 0.0 8.3686 8.3686 94.282 0.0 0.0 0.0 59.45677228596267 8.443350238481031 8.443350238481031 9.262137858390815 0 1.2302046884880935 2.0 0.0 0.4247425010840047 + + DM{I|L}QVRKV;DM{I|L}[AG]VRKV;VN[C(Carbamidomethyl (C))N]VRKV;VGG[C(Carbamidomethyl (C))N]VRKV 8.3686;7.4307;2.7158;1.778 +;-;-;- + 313 + 1 1.469 84940.5 1.0 4291 5264 9538 HBL1_DMSO_200M_050219_1,9557 HBL1_DMSO_200M_050219_1,9557,DMLQVRKV False True DMLQVRKV 50.00256 494.784381091595 2448486.0 9538.0 ENSG00000114742|ENST00000302313|WDR48;;nc|ENSG00000114742|Q8TAF3-5|WDR48;;nc|ENSG00000114742|Q8TAF3-2|WDR48;;nc|ENSG00000114742|Q8TAF3-3|WDR48;;ENST00000466405.1_1_3:39133106-39135740:+|nuORF;;nc|ENSG00000114742|Q8TAF3-4|WDR48 4.885096549987793 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9558 50.016 763.0 90557.0 25 0 7826.3 20930 LNEISEETTIQ 11 98 638.8177953348397 1275.6210377364794 2 638.8169433474541 MULTI CID FTMS 0 0 0 9538 218106.546875 0.164302337264305 2 -0.1817855834960937 20 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 45.739877483867886 0.1412225664835785 3 {I|L}NADQP 6 9 57.969 0.0 0.0 4.5444 0.0 0.0 0.0 634.3123262994749 634.3123262994749 -0.0115884485061812 0.0 -0.0115884485061812 0.0 0 1.2614393726401687 1.3010299956639813 0.0 0.3494850021680094 {I|L}NADQP 4.5444 - 201 + 1 1.469 59147.2 1.0 4292 5264 9538 HBL1_DMSO_200M_050219_1,9558 HBL1_DMSO_200M_050219_1,9558,LNEISEETTIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9560 50.02 9.4 7012400.0 25 0 1162100.0 + 43110 VYPDGIRHI 9 70 357.19787880855125 1068.5718070258538 3 357.1977416872978 MULTI CID FTMS 0 0 0 9559 3839157.25 0.5107656854287206 1 -0.092437744140625 1 Unmodified _VYPDGIRHI_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 32.30548876998284 0.1201446275138228 3 [YV]{I|L}PDGRH{I|L} 9 2 + 69.509 0.0 0.0 6.5048 6.5048 78.683 0.0 0.0 0.0 49.08559477871185 9.850680276396346 9.850680276396346 0.796896906561031 0 0.2887254899964357 2.0 1.1549471895720984 0.0 [YV]{I|L}PDGRH{I|L};[YV]P{I|L}DGRH{I|L};[YV]PD{I|L}GRH{I|L};[DP][R{I|L}]DP{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[DP][R{I|L}]D{I|L}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[DP][R{I|L}]{I|L}DP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[DP][R{I|L}]GH{I|L}[YV];[YV]{I|L}YH{I|L}[YV];[YV][RK]YPM{I|L};[DP]G[R{I|L}]H{I|L}[YV] 6.5048;6.4302;6.3849;4.7047;4.6302;4.5848;2.9072;2.677;2.1147;1.735 -;-;-;-;-;-;-;-;-;- 169 + 1 1.473 73342.4 1.0 4293 5265 9559 HBL1_DMSO_200M_050219_1,9560 HBL1_DMSO_200M_050219_1,9560,VYPDGIRHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9561 50.021 18.0 3170500.0 25 0 531860.0 + 3372 AYQEAVRTL 9 55 525.7823194704627 1049.5500860077252 2 525.7823364138603 MULTI CID FTMS 0 0 0 9559 1631826.0 0.2344272426606536 2 -0.1964263916015625 2 Unmodified _AYQEAVRTL_ ENSG00000127666|ENST00000248244|TICAM1 43.77239144664712 0.0547478964384323 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEAVRT{I|L} 9 0 + 66.591 0.0 0.0 6.3447 6.3447 88.46 0.0 0.0 0.0 54.807837616599656 8.248538340816147 8.248538340816147 9.208187539523742 0 0.805462187404089 2.0 0.5 0.3807196863200844 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEAVRT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]EAVRT{I|L} 6.3447;5.4673 +;- + 65 + 1 1.473 51526.9 1.0 4294 5265 9559 HBL1_DMSO_200M_050219_1,9561 HBL1_DMSO_200M_050219_1,9561,AYQEAVRTL True True AYQEAVRTL 50.021241 525.78233641386 90512424.0 9559.0 ENSG00000127666|ENST00000248244|TICAM1 6.790135224660237 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9562 50.022 18.0 2691000.0 25 0 326610.0 + 41515 VPNNKITVV 9 85 492.2978879307647 982.5812229283296 2 492.2979919314384 MULTI CID FTMS 0 0 0 9559 2874451.25 0.0546233029908043 9 -0.7173728942871094 3 Unmodified _VPNNKITVV_ ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 47.74868867922204 0.0453060283459952 3 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 7 3 35.303 0.0 0.0 3.5929 0.0 0.0 0.0 213.1240388010671 213.1240388010671 13.630930362208762 0.0 0.0 0.0 0 0.7742275032520141 1.3010299956639813 0.7059771852360797 0.0 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 3.5929 - 136 1 1.473 45473.7 1.0 4295 5265 9559 HBL1_DMSO_200M_050219_1,9562 HBL1_DMSO_200M_050219_1,9562,VPNNKITVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9563 50.024 25.0 2610400.0 25 0 524970.0 + 5849 DPVPEVRTV 9 63 506.2771651126911 1010.5397772921822 2 506.2771484255791 MULTI CID FTMS 0 0 0 9559 1803537.625 0.7865582785657855 -1 0.0893478393554687 4 Unmodified _DPVPEVRTV_ ENSG00000089154|ENST00000300648|GCN1 31.26834338654808 0.1333407332142048 3 [DP]VPE 5 4 49.208 0.0 0.0 4.8695 0.0 0.0 0.0 470.2737808996463 470.2737808996463 40.25576261223691 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + [DP]VPE 4.8695 + + 25 + 1 1.473 52283.0 1.0 4296 5265 9559 HBL1_DMSO_200M_050219_1,9563 HBL1_DMSO_200M_050219_1,9563,DPVPEVRTV False True DPVPEVRTV 50.023597 506.277148425579 45084340.0 9559.0 ENSG00000089154|ENST00000300648|GCN1 5.304455916086833 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9564 50.025 36.0 992710.0 25 0 84256.0 + 2720 ATGENLPRV 9 66 478.7617759464704 955.5089989597408 2 478.7617370486259 MULTI CID FTMS 0 0 0 9559 1478128.0 0.454228216545766 -2 0.24041748046875 5 Unmodified _ATGENLPRV_ ENSG00000166181|ENST00000531273|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-6|API5 32.78568957990786 0.1150597335874693 3 [TA]GEN{I|L}PRV 9 0 + 73.351 0.0 0.0 7.6767 7.6767 92.538 0.0 0.0 0.0 51.92471268044436 12.61993046835002 12.61993046835002 9.208187539523747 0 0.75 2.0 0.0 0.4247425010840047 + + [TA]GEN{I|L}PRV;[TA]GEGG{I|L}PRV 7.6767;6.713 +;- + 78 + 1 1.473 32664.2 1.0 4297 5265 9559 HBL1_DMSO_200M_050219_1,9564 HBL1_DMSO_200M_050219_1,9564,ATGENLPRV True True ATGENLPRV 50.024776 478.761737048626 102066720.0 9559.0 nc|ENSG00000166181|Q9BZZ5-3|API5;;nc|ENSG00000166181|Q9BZZ5-6|API5;;nc|ENSG00000166181|Q9BZZ5-2|API5;;nc|ENSG00000166181|Q9BZZ5-5|API5;;nc|ENSG00000166181|Q9BZZ5-1|API5;;ENSG00000166181|ENST00000531273|API5 7.647500038146973 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9565 50.026 44.0 1308700.0 25 0 314450.0 -1 0 84 362.2077555350994 361.2004790684994 1 362.2072631716728 MULTI CID FTMS 0 0 0 9559 947284.6875 0.3975087791776391 -2 0.24041748046875 6 3 VP{M(Oxidation (M))|F} 3 -1 + 43.716 0.0 0.0 12.103 12.103 93.069 0.0 0.0 0.0 7.144352409690399 7.144352409690399 7.144352409690399 7.144352409690399 0 0.5 1.3979400086720375 0.0 0.0 VP{M(Oxidation (M))|F};[VP]{M(Oxidation (M))|F} 12.103;10.125 -;- 21 + 1 1.473 54852.5 1.0 4298 5265 9559 HBL1_DMSO_200M_050219_1,9565 HBL1_DMSO_200M_050219_1,9565, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9566 50.028 83.0 431800.0 25 0 30955.0 -1 VPLDGRPMNI 10 61 564.297835642436 1126.581118351672 2 564.2980834841728 MULTI CID FTMS 0 0 0 9559 647274.5625 0.7514887707631167 2 -0.1964263916015625 7 Oxidation (M) _VPLDGRPM(Oxidation (M))NI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 15.248480904072842 0.5916873121453583 3 VP{I|L}D 4 -1 49.17 0.0 0.0 4.3645 0.0 0.0 0.0 699.3245333307249 699.3245333307249 20.498037644757048 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 VP{I|L}D 4.3645 + + 36 + 1 1.473 35596.8 1.0 4299 5265 9559 HBL1_DMSO_200M_050219_1,9566 HBL1_DMSO_200M_050219_1,9566,VPLDGRPMNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9567 50.03 81.0 953620.0 25 0 239580.0 + 39216 TYVTPRRPF 9 71 568.8138039201181 1135.613054907036 2 568.8143798708916 MULTI CID FTMS 0 0 0 9559 629521.4375 0.9731894095244868 1 -0.092437744140625 8 Unmodified _TYVTPRRPF_ ENSG00000170889|ENST00000302907|RPS9;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 47.74868867922204 0.0453060283459952 3 [YT]VT[RP]R{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 9 0 + 42.781 0.0 0.0 3.7672 3.7672 82.85 0.0 0.0 0.0 24.620215259895414 4.762036441594191 4.762036441594191 15.22878745280337 0 1.492992819099939 2.0 0.0 1.0 + + [YT]VT[RP]R{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]TT[RP]R{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]R[W{I|L}][VG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV][VG][W{I|L}]R{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]R[W{I|L}]VV{[DS]|[MA]|[CV]|TT} 3.7672;2.4262;1.0688;1.0688;0.84329 +;-;-;-;- + 152 + 1 1.473 66592.7 1.0 4300 5265 9559 HBL1_DMSO_200M_050219_1,9567 HBL1_DMSO_200M_050219_1,9567,TYVTPRRPF True True TYVTPRRPF 50.029732 568.814379870892 115789355.0 9559.0 ENSG00000170889|ENST00000302907|RPS9;;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 5.915701866149902 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9568 50.033 186.0 291700.0 25 0 42439.0 + -1 DFGCHSVMECW 11 79 693.7479756464803 1385.4813983597603 2 693.7492553591728 MULTI CID FTMS 0 0 0 9559 545487.6875 0.7660050216238058 1 -0.092437744140625 9 Carbamidomethyl (C),Oxidation (M) _DFGCHSVM(Oxidation (M))EC(Carbamidomethyl (C))W_ REV__L1PA6_dup546|chr2:49227587-49231532:-|1.156546377819926|0.2927699401366612|1.98|48.0|121|1|anti-sense 1.3295316138638542 0.8688751186870782 3 V{M(Oxidation (M))|F}DASS 6 -1 34.954 0.0 0.0 2.5228 0.0 0.0 384.159695334173 392.0740450494751 776.2337403836481 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 V{M(Oxidation (M))|F}DASS 2.5228 - 85 + 1 1.473 46177.7 1.0 4301 5265 9559 HBL1_DMSO_200M_050219_1,9568 HBL1_DMSO_200M_050219_1,9568,DFGCHSVMECW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9569 50.035 71.0 290820.0 25 0 21533.0 33604 SIPQPHQVLG 10 50 538.2983593150562 1074.5821656969124 2 538.2982055544853 MULTI CID FTMS 0 0 0 9559 536022.0 0.3526187942708376 -1 0.0893478393554687 10 Unmodified _SIPQPHQVLG_ ENSG00000114790|ENST00000465093|ARHGEF26;nc|ENSG00000114790|Q96DR7-3|ARHGEF26;nc|ENSG00000114790|Q96DR7-4|ARHGEF26 5.731851221503515 0.7001233259664787 3 C(Carbamidomethyl (C))V 2 9 9.464 0.0 0.0 0.88071 0.0 0.0 536.3202160892937 276.1357515924438 812.4559676817375 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))V 0.88071 - 21 + 1 1.473 21098.3 1.0 4302 5265 9559 HBL1_DMSO_200M_050219_1,9569 HBL1_DMSO_200M_050219_1,9569,SIPQPHQVLG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9570 50.037 68.0 611790.0 25 0 68821.0 + 15458 IPQGLNKV 8 61 434.7662036322309 867.5178543312618 2 434.7659179568291 MULTI CID FTMS 0 0 0 9559 500574.53125 0.4466312467063898 3 -0.2692146301269531 11 Unmodified _IPQGLNKV_ REV__ENST00000514825.1_1_5:132437411-132440125:+|nuORF 14.581692164780916 0.6954967302934248 3 {I|L}P 2 -1 41.766 0.0 0.0 4.8144 0.0 0.0 0.0 654.3578919018707 654.3578919018707 28.2711470149615 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}P 4.8144 + + 16 + 1 1.473 39305.0 1.0 4303 5265 9559 HBL1_DMSO_200M_050219_1,9570 HBL1_DMSO_200M_050219_1,9570,IPQGLNKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9571 50.041 223.0 384390.0 25 0 66029.0 + 24280 MAREVINRI 9 115 551.3130739426214 1100.6115949520429 2 551.3133422732353 MULTI CID FTMS 0 0 0 9559 392259.8125 0.6181363320928237 -1 0.0893478393554687 12 Unmodified _MAREVINRI_ ENSG00000196305|ENST00000443024|IARS1 20.580933911654288 0.2795815587326093 3 {I|L}[MN]E 4 7 21.867 0.0 0.0 1.9868 0.0 0.0 0.0 610.3642061822874 610.3642061822874 3.908103009885764 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 {I|L}[MN]E 1.9868 - 168 + 1 1.473 70160.3 1.0 4304 5265 9559 HBL1_DMSO_200M_050219_1,9571 HBL1_DMSO_200M_050219_1,9571,MAREVINRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9572 50.044 157.0 261930.0 25 0 17300.0 40027 VGFLPATK 8 87 416.7515782530104 831.4886035728207 2 416.7516357302666 MULTI CID FTMS 0 0 0 9559 369436.6875 0.5638207692722251 3 -0.2692146301269531 13 Unmodified _VGFLPATK_ ENSG00000099331|ENST00000682292|MYO9B;MYO9B|p.S1354Pfs*100|1|0.36|ENSG00000099331|chr19:17197802-17197803|-/CG|frameshift_variant;nc|ENSG00000099331|Q13459-2|MYO9B 8.593279151180031 0.7721714526254883 3 K 1 7 16.722 0.0 0.0 2.0111 0.0 0.0 685.3825530130536 0.0 685.3825530130536 0.0 0.2680249241196719 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 + K 2.0111 + + 34 + 1 1.473 41080.5 1.0 4305 5265 9559 HBL1_DMSO_200M_050219_1,9572 HBL1_DMSO_200M_050219_1,9572,VGFLPATK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9573 50.047 182.0 413250.0 25 0 27283.0 + 5691 DPIARPSEI 9 116 499.2701667695061 996.5257806058122 2 499.2720519900322 MULTI CID FTMS 0 0 0 9559 296431.3125 0.2366175820860138 -2 0.24041748046875 14 Unmodified _DPIARPSEI_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B 34.93206674587334 0.1032771302489716 3 [DP]{I|L}AR 5 4 51.51 0.0 0.0 5.169 0.0 0.0 0.0 441.2012982019788 441.2012982019788 28.022021777819003 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.0 0.0 + [DP]{I|L}AR 5.169 + + 584 + 1 1.473 64128.1 1.0 4306 5265 9559 HBL1_DMSO_200M_050219_1,9573 HBL1_DMSO_200M_050219_1,9573,DPIARPSEI True True DPIARPSEI 50.047462 499.272051990032 5341627.5 9559.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 5.27750317255656 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9574 50.051 163.0 264900.0 25 0 12321.0 + 24382 MFPEHAVKAY 10 80 398.1987997273793 1191.574569782338 3 398.1991149783134 MULTI CID FTMS 0 0 0 9559 254050.421875 0.3088424271047833 -13 1.3597183227539062 15 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 9.38312468134398 0.6832340498775793 3 Y 1 9 14.604 0.0 0.0 1.2256 0.0 0.0 1010.5004253505004 0.0 1010.5004253505004 0.0 -3.3547064036788754 -3.3547064036788754 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2256 + + 105 + 1 1.473 44209.9 1.0 4307 5265 9559 HBL1_DMSO_200M_050219_1,9574 HBL1_DMSO_200M_050219_1,9574,MFPEHAVKAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9575 50.062 624.0 208660.0 25 0 15110.0 -1 PCECPEGLCH 10 168 629.7349044733274 1257.4552560134548 2 629.7356445193291 MULTI CID FTMS 0 0 0 9559 198910.3125 0.085537471823605 -2 0.24041748046875 16 3 Carbamidomethyl (C) _PC(Carbamidomethyl (C))EC(Carbamidomethyl (C))PEGLC(Carbamidomethyl (C))H_ ENSG00000074660|ENST00000263071|SCARF1;ENST00000570902.1_1_17:1542098-1543756:-|nuORF;ENST00000576012.5_1_17:1538054-1543444:-|nuORF;nc|ENSG00000074660|Q14162-3|SCARF1 10.073929032068715 0.6785112666868882 3 [C(Carbamidomethyl (C))Q]N{I|L}QEW 7 -1 36.107 0.0 0.0 2.8714 0.0 0.0 0.0 296.05329309635005 296.05329309635005 1.104249695961684 0.0 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.6989700043360187 [C(Carbamidomethyl (C))Q]N{I|L}QEW 2.8714 - 3594 + 1 1.473 109698.7 1.0 4308 5265 9559 HBL1_DMSO_200M_050219_1,9575 HBL1_DMSO_200M_050219_1,9575,PCECPEGLCH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9576 50.073 651.0 449170.0 25 0 20690.0 + 17896 KQQDHFFQA 9 232 574.777844954877 1147.5411369765538 2 574.7782470583916 MULTI CID FTMS 0 0 0 9559 186806.71875 0.109871860228964 -2 0.24041748046875 17 Unmodified _KQQDHFFQA_ ENSG00000115956|ENST00000234313|PLEK 110.5527297667825 0.0053998527608258 3 {NN|[MP]|[D{I|L}]|[EV]}RDH{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA 9 3 + 65.053 0.0 0.0 5.6689 5.6689 77.795 0.0 0.0 0.0 1.8482208942459408 16.478174818886373 1.8482208942459408 1.8482208942459408 0 1.241451212728581 0.3372421683184259 0.785666875892183 1.3996498648046138 {NN|[MP]|[D{I|L}]|[EV]}RDH{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA;[AG]DHQK{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA;{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}[DV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A[RD]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA;{[CP]|[EA]}[W{I|L}]H{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA;{[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}K{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA;{[QD]|[EN]|[WG]|[KD]|[RS]}HQK{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA;[AG]D[KQ]H{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA;{NN|[MP]|[D{I|L}]|[EV]}RDH{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG]A 5.6689;5.5078;5.3761;5.3692;5.3363;5.2744;5.2527;5.1504;4.9376;4.8665 -;-;-;-;-;-;-;-;-;- 7855 1 1.473 216138.8 1.0 4309 5265 9559 HBL1_DMSO_200M_050219_1,9576 HBL1_DMSO_200M_050219_1,9576,KQQDHFFQA True True KQQDHFFQA 50.072916 574.778247058392 18509641.125 9559.0 ENSG00000115956|ENST00000234313|PLEK 8.295626640319824 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9577 50.079 337.0 234300.0 25 0 15331.0 + 36457 TAAENGLTV 9 123 438.2269384891829 874.4393240451658 2 438.2272216677666 MULTI CID FTMS 0 0 0 9559 144817.140625 0.8150199637438538 -1 0.0893478393554687 18 Unmodified _TAAENGLTV_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 20.453626601364224 0.2830276176381075 3 [TA]V 3 6 19.41 0.0 0.0 2.2197 0.0 0.0 0.0 600.2627547915126 600.2627547915126 0.6543027528918124 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [TA]V 2.2197 - 120 1 1.473 64120.6 1.0 4310 5265 9559 HBL1_DMSO_200M_050219_1,9577 HBL1_DMSO_200M_050219_1,9577,TAAENGLTV False True TAAENGLTV 50.079012 438.227221667767 1152291.5 9559.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 1.576762740810712 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9578 50.093 800.0 101190.0 25 0 25062.0 -1 0 51 996.1022098051808 4975.474666692903 5 996.7053100466728 MULTI CID FTMS 0 0 0 9559 119327.8125 0.6641014445657324 -1 0.0893478393554687 19 3 {I|L} 1 -1 3.9794 0.0 0.0 0.07998 0.0 0.0 4451.17536356966 408.1796053522094 4859.354968921869 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.07998 - 10 + 1 1.473 59034.4 0.8199999928474426 4311 5265 9559 HBL1_DMSO_200M_050219_1,9578 HBL1_DMSO_200M_050219_1,9578, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9579 50.108 800.0 51485.0 25 0 11084.0 -1 0 48 1121.1324077054633 3360.37539371659 3 1121.128222644329 MULTI CID FTMS 0 0 0 9559 121702.65625 0.2536206778656577 6 -0.57476806640625 20 3 C(Carbamidomethyl (C)){M(Oxidation (M))|F} 2 -1 10.969 0.0 0.0 0.32642 0.0 0.0 1314.5042080559947 1735.7440889947875 3050.248297050782 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){M(Oxidation (M))|F} 0.32642 - 6 + 1 1.473 40360.7 0.7200000286102295 4312 5265 9559 HBL1_DMSO_200M_050219_1,9579 HBL1_DMSO_200M_050219_1,9579, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9581 50.112 57.0 1004600.0 25 0 80873.0 -1 VYIMVVCKV 9 78 535.2930364672696 1068.5715200013392 2 535.2931396365166 MULTI CID FTMS 0 0 0 9580 741379.375 0.2445300383857534 2 -0.1767768859863281 1 Oxidation (M) _VYIM(Oxidation (M))VVCKV_ ENST00000488482.1_1_10:91403553-91403664:-|nuORF 16.942295170755138 0.3780752226737986 3 VYPD 4 -1 50.974 0.0 0.0 4.7703 0.0 0.0 0.0 591.338062707675 591.338062707675 40.69659793691619 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 VYPD 4.7703 - 50 + 1 1.473 53762.7 1.0 4313 5266 9580 HBL1_DMSO_200M_050219_1,9581 HBL1_DMSO_200M_050219_1,9581,VYIMVVCKV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9582 50.114 45.0 1525100.0 25 0 96470.0 28284 PRLTYKTV 8 96 489.2932190630981 976.5718851929962 2 489.2936584353447 MULTI CID FTMS 0 0 0 9580 1497401.125 1.0 0 0.0 2 Unmodified _PRLTYKTV_ ENSG00000147416|ENST00000276390|ATP6V1B2;ENST00000523482.5_1_8:20054917-20070443:+|nuORF 48.345845343767074 0.1470278396477103 3 [R{I|L}]PPP[TP]TV 9 6 + 62.763 0.0 0.0 6.4268 6.4268 88.522 0.0 0.0 0.0 9.164539485499256 13.46787486224656 9.164539485499256 9.164539485499256 0 1.4731975075880328 1.0969100130080565 0.9247425010840048 0.2742275032520141 [R{I|L}]PPP[TP]TV;[{I|L}P]RPP[TP]TV;[R{I|L}]PPPE{[VA]|[{I|L}G]}V;[R{I|L}]PPP{[VA]|[{I|L}G]}EV;[{I|L}P]RPPE{[VA]|[{I|L}G]}V;[{I|L}P]RPP{[VA]|[{I|L}G]}EV;[R{I|L}][YK][TP]TV;[R{I|L}][YK]E{[VA]|[{I|L}G]}V;[R{I|L}][YK]{[VA]|[{I|L}G]}EV;[R{I|L}][YG][K{I|L}]EV 6.4268;5.4884;5.429;5.3298;4.4906;4.3914;3.4634;2.4656;2.3664;2.3664 -;-;-;-;-;-;-;-;-;- 245 1 1.473 55943.0 1.0 4314 5266 9580 HBL1_DMSO_200M_050219_1,9582 HBL1_DMSO_200M_050219_1,9582,PRLTYKTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9583 50.115 21.0 3549200.0 25 0 381210.0 + -1 SLHSKFIRV 9 106 362.8245463821464 1085.4518097466394 3 362.8246032595634 MULTI CID FTMS 0 0 0 9580 2278434.0 1.0 0 0.0 3 Carbamidomethyl (C),Oxidation (M) _LGADGVC(Carbamidomethyl (C))M(Oxidation (M))TF_ ENSG00000150907|ENST00000379561|FOXO1 8.97624648632007 0.6851160995914376 3 {[VA]|[{I|L}G]}ADD{M(Oxidation (M))|F} 6 -1 38.109 0.0 0.0 3.5109 0.0 0.0 0.0 464.1640226275449 464.1640226275449 7.398773177208181 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.0 {[VA]|[{I|L}G]}ADD{M(Oxidation (M))|F} 3.5109 - 109 + 1 1.473 72374.4 1.0 4315 5266 9580 HBL1_DMSO_200M_050219_1,9583 HBL1_DMSO_200M_050219_1,9583,LGADGVCMTF False False SLHSKFIRV 50.114909 362.824603259563 6721104.5 9580.0 ENSG00000150907|ENST00000379561|FOXO1 1.7925498286883037 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9584 50.116 25.0 1937400.0 25 0 370620.0 -1 LGADGVCMTF 10 83 543.7334020427141 1085.4522511522282 2 543.7342407107353 MULTI CID FTMS 0 0 0 9580 1925747.0 1.0 0 0.0 4 Carbamidomethyl (C),Oxidation (M) _LGADGVC(Carbamidomethyl (C))M(Oxidation (M))TF_ ENSG00000143624|ENST00000318967|INTS3;ENST00000481797.5_1_1:153719754-153719913:+|nuORF;nc|ENSG00000143624|Q68E01|INTS3 14.838274106304384 0.5985701837916485 3 {[VA]|[{I|L}G]}ADD{M(Oxidation (M))|F} 6 -1 55.406 0.0 0.0 5.1044 0.0 0.0 0.0 464.1625155084594 464.1625155084594 41.69469995980698 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 {[VA]|[{I|L}G]}ADD{M(Oxidation (M))|F} 5.1044 - 141 + 1 1.473 44595.3 1.0 4316 5266 9580 HBL1_DMSO_200M_050219_1,9584 HBL1_DMSO_200M_050219_1,9584,LGADGVCMTF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9585 50.117 53.0 911320.0 25 0 104630.0 + 2490 AQYEHDLEVA 10 80 587.7724929962113 1173.5304330592226 2 587.7726928591728 MULTI CID FTMS 0 0 0 9580 1211447.125 0.2369696923758544 -1 0.092437744140625 5 Unmodified _AQYEHDLEVA_ ENSG00000132341|ENST00000543796|RAN;ENST00000413691.2_1_4:174554896-174555010:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 36.506200033944 0.1944608063770638 3 [HD]{I|L}EYEQAVA 10 7 + 52.401 0.0 0.0 4.4652 4.4652 53.897 0.0 0.0 0.0 5.764837301042718 26.687522094009 5.764837301042718 0.0 0 0.6989700043360187 0.0 0.3494850021680094 0.7302046884880937 [HD]{I|L}EYEQAVA;[HD]E{I|L}YEQAVA;[HD]EY{I|L}EQAVA;[HD]{I|L}EEYQAVA;[HD]E{I|L}EYQAVA;[HD]E{I|L}Y[QA]EVA;[HD]{I|L}EY[QA]EVA;{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YEQAVA;[HD]{I|L}E[QA]YEVA;[HD]EY{I|L}[QA]EVA 4.4652;4.4652;4.0587;3.9522;3.9522;3.5947;3.5947;3.2304;3.1881;3.1881 -;-;-;-;-;-;-;-;-;- 512 1 1.473 50997.9 1.0 4317 5266 9580 HBL1_DMSO_200M_050219_1,9585 HBL1_DMSO_200M_050219_1,9585,AQYEHDLEVA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9586 50.119 62.0 813600.0 25 0 60951.0 + 24193 MAEGAPRIV 9 67 472.2553620836653 942.4961712341308 2 472.2551147341728 MULTI CID FTMS 0 0 0 9580 671642.9375 0.8629465343977716 -1 0.092437744140625 6 Unmodified _MAEGAPRIV_ ENST00000392708.8_1_11:125462770-125462797:+|nuORF 43.85829265575387 0.0542763391141878 3 MAEGA 5 4 69.949 0.0 0.0 7.4216 0.0 0.0 0.0 480.2944682192201 480.2944682192201 57.730012720637376 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + MAEGA 7.4216 + + 62 + 1 1.473 45087.6 1.0 4318 5266 9580 HBL1_DMSO_200M_050219_1,9586 HBL1_DMSO_200M_050219_1,9586,MAEGAPRIV True True MAEGAPRIV 50.118984 472.255114734173 4039961.0 9580.0 ENST00000392708.8_1_11:125462770-125462797:+|nuORF 6.610197861989339 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9587 50.121 69.0 1127300.0 25 0 154450.0 + + 26911 AYPNNYETM 9 91 551.7285544191382 1101.4425559050762 2 551.7290527224541 MULTI CID FTMS 0 0 0 9580 657963.5625 0.8817830191081437 -1 0.092437744140625 7 Unmodified _PDNASEPQNM_ ENSG00000198730|ENST00000361367|CTR9 13.90604991867851 0.6142120002215601 3 [NP]NYE 5 -1 24.947 0.0 0.0 2.265 0.0 0.0 0.0 481.1764175596263 481.1764175596263 5.483324797206279 0.0 0.0 0.0 0 0.0 0.0 0.0 0.75 [NP]NYE 2.265 - 160 1 1.473 65575.5 1.0 4319 5266 9580 HBL1_DMSO_200M_050219_1,9587 HBL1_DMSO_200M_050219_1,9587,PDNASEPQNM False False AYPNNYETM 50.120636 551.729052722454 4439603.5 9580.0 ENSG00000198730|ENST00000361367|CTR9 4.882854620615642 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9588 50.123 135.0 934610.0 25 0 164540.0 -1 0 88 966.4326234561798 1930.85069397916 2 966.4324828982352 MULTI CID FTMS 0 0 0 9580 656258.625 0.345308496529465 4 -0.3806991577148437 8 3 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L}PE 8 -1 24.907 0.0 0.0 1.29 0.0 0.0 0.0 1075.3936561851071 1075.3936561851071 1.929797126529138 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.6109243748081782 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L}PE 1.29 - 280 1 1.473 93425.0 1.0 4320 5266 9580 HBL1_DMSO_200M_050219_1,9588 HBL1_DMSO_200M_050219_1,9588, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9589 50.132 492.0 353170.0 25 0 24063.0 6773 EEADWIYRNAF 11 164 707.3231041183514 1412.6316553035026 2 707.3238403201103 MULTI CID FTMS 0 0 0 9580 443956.0625 0.5983495407987746 -1 0.092437744140625 9 Unmodified _EEADWIYRNAF_ ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 19.361941925380144 0.6323962752489956 3 {[QN]|[E{I|L}]|[KN]}AG[HV]EAQQNA{M(Oxidation (M))|F} 13 8 + 100.12 0.0 0.0 7.0876 7.0876 81.334 0.0 0.0 0.0 2.7815125038364386 27.468336760537625 2.7815125038364386 1.4171507062154802 0 0.9269359821608808 0.0 0.7742275032520141 3.440614065464281 {[QN]|[E{I|L}]|[KN]}AG[HV]EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG[HV]EAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG[HV]EAQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG[HV]EA[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}Q[HV]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}A{[DS]|[MA]|[CV]|TT}[YN]AQQNA{M(Oxidation (M))|F} 7.0876;6.9873;6.4453;6.4453;6.4453;6.3432;6.3432;6.3432;6.1397;5.7431 -;-;-;-;-;-;-;-;-;- 24302 1 1.473 125997.3 1.0 4321 5266 9580 HBL1_DMSO_200M_050219_1,9589 HBL1_DMSO_200M_050219_1,9589,EEADWIYRNAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9590 50.135 141.0 699260.0 25 0 54545.0 41167 VPCPPLRRV 9 111 346.20753594510234 1035.600778435507 3 346.2072936892509 MULTI CID FTMS 0 0 0 9580 379864.53125 0.6159933947634254 -1 0.092437744140625 10 Unmodified _VPCPPLRRV_ ENSG00000171763|ENST00000305560|SPATA5L1;nc|ENSG00000171763|Q9BVQ7-2|AFG2B;nc|ENSG00000171763|Q9BVQ7-3|AFG2B 15.248480904072842 0.4239247793462406 3 VPCV 4 5 42.814 0.0 0.0 4.1342 0.0 0.0 0.0 634.379589513995 634.379589513995 29.137978910385 0.0 0.0 0.0 0 0.3885989491816006 0.6989700043360187 0.0 0.0 VPCV 4.1342 - 38 + 1 1.473 87285.9 1.0 4322 5266 9580 HBL1_DMSO_200M_050219_1,9590 HBL1_DMSO_200M_050219_1,9590,VPCPPLRRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9591 50.139 189.0 380360.0 25 0 32809.0 + -1 KTPSKFHKM 9 116 560.3023353679212 1118.5901178026422 2 560.3029052615166 MULTI CID FTMS 0 0 0 9580 295819.1875 0.8339664586731211 -1 0.092437744140625 11 Oxidation (M) _KTPSKFHKM(Oxidation (M))_ REV__ENSG00000184611|ENST00000332142|KCNH7;REV__nc|ENSG00000184611|Q9NS40-2|KCNH7 13.042465956692816 0.4836390050082244 3 [{I|L}A][QT]T[{I|L}P]TT{[CA]|SS} 11 -1 + 34.898 0.0 0.0 3.1198 3.1198 69.76 0.0 0.0 0.0 0.9580973727326594 0.8354605145007454 0.8354605145007454 1.632827185216584 0 0.9247425010840048 1.2218487496163564 1.1382104921644451 0.0 [{I|L}A][QT]T[{I|L}P]TT{[CA]|SS};[KT]T[PS][{I|L}P]TT{[CA]|SS};[KT][PS]T[{I|L}P]TT{[CA]|SS};[KT]T[{I|L}P][PS]TT{[CA]|SS};[KT][QP]NRT{M(Oxidation (M))|F}Q;[KT]T[{I|L}P][VG]ET{[CA]|SS};[KT][QP]NRG[YR];[KT]T[{I|L}P][VG]TE{[CA]|SS};[H{I|L}][YT][{I|L}P]G[YR];[KT]T[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{[CA]|SS} 3.1198;2.9739;2.4875;2.3759;2.0776;1.727;0.57411;0.47378;0.297;0.15504 -;-;-;-;-;-;-;-;-;- 219 1 1.473 58380.8 1.0 4323 5266 9580 HBL1_DMSO_200M_050219_1,9591 HBL1_DMSO_200M_050219_1,9591,KTPSKFHKM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9592 50.145 357.0 421990.0 25 0 50694.0 + 21698 LPLRQASL 8 122 449.279874727898 896.5451965225959 2 449.2793762087822 MULTI CID FTMS 0 0 0 9580 241778.609375 0.792984546830569 -1 0.092437744140625 12 Unmodified _LPLRQASL_ REV__ENST00000432054.6_1_3:129389959-129390082:-|nuORF 25.399314129420983 0.5099049743284904 3 {I|L}P{I|L}G 4 -1 52.691 0.0 0.0 5.8771 0.0 0.0 0.0 513.2788790338499 513.2788790338499 34.195925227640984 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P{I|L}G 5.8771 - 119 + 1 1.473 121749.9 1.0 4324 5266 9580 HBL1_DMSO_200M_050219_1,9592 HBL1_DMSO_200M_050219_1,9592,LPLRQASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9593 50.158 772.0 92594.0 25 0 5869.1 + -1 PPWFMCFPPYF 11 90 744.8259587022528 0 744.8255493044853 PEAK CID FTMS 0 0 0 9580 174195.96875 1.0 0 0.0 13 Carbamidomethyl (C) _PPWFMC(Carbamidomethyl (C))FPPYF_ REV__ENSG00000215474|ENST00000425639|SKOR2 6.723162845929126 0.47618401536486 3 ADQ[EC]PPPGA 10 -1 40.967 0.0 0.0 2.7538 0.0 0.0 328.1463822904423 191.0829256647094 519.2293079551517 0.0 0.0 0.0 0.0 0 0.5 0.0 0.5 0.4247425010840047 ADQ[EC]PPPGA 2.7538 - 1049 + 1 1.473 55234.1 1.0 4325 5266 9580 HBL1_DMSO_200M_050219_1,9593 HBL1_DMSO_200M_050219_1,9593,PPWFMCFPPYF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9594 50.17 689.0 171430.0 25 0 18049.0 + -1 TYQAMVHEL 9 155 554.2603996899592 1106.5062464467185 2 554.2608520388603 MULTI CID FTMS 0 0 0 9580 163433.96875 0.514446774314603 4 -0.3806991577148437 14 Oxidation (M) _TYQAM(Oxidation (M))VHEL_ ENSG00000136631|ENST00000644510|VPS45;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;nc|ENSG00000136631|Q9NRW7-2|VPS45 34.40172386719151 0.1061884637610825 3 [YT]QA{M(Oxidation (M))|F}V 6 -1 52.77 0.0 0.0 4.769 0.0 0.0 0.0 394.1727999322876 394.1727999322876 13.891401297782402 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.0 0.5 [YT]QA{M(Oxidation (M))|F}V 4.769 + + 1533 + 1 1.473 96651.6 1.0 4326 5266 9580 HBL1_DMSO_200M_050219_1,9594 HBL1_DMSO_200M_050219_1,9594,TYQAMVHEL False False TYQAMVHEL 50.170369 554.26085203886 1528594.375 9580.0 ENSG00000136631|ENST00000644510|VPS45;;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;;nc|ENSG00000136631|Q9NRW7-2|VPS45 8.02606232961019 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9595 50.183 727.0 107290.0 25 0 5608.2 + -1 AGELTPEEEAQ 11 138 608.2729091793232 1214.5312654254462 2 608.2743408083916 MULTI CID FTMS 0 0 0 9580 154022.390625 1.0 0 0.0 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGELTPEEEAQ_ ENSG00000178372|ENST00000380332|CALML5 17.44264345198275 0.6723198055858692 3 {[DA]|[EG]}{I|L}T[WD]T 7 -1 21.544 0.0 0.0 1.7739 0.0 0.0 0.0 409.1763819628088 409.1763819628088 -0.2212343596843098 0.0 -0.2212343596843098 0.0 0 0.8807196863200843 0.6777807052660807 0.3494850021680094 0.0 {[DA]|[EG]}{I|L}T[WD]T 1.7739 - 487 1 1.473 59927.0 1.0 4327 5266 9580 HBL1_DMSO_200M_050219_1,9595 HBL1_DMSO_200M_050219_1,9595,AGELTPEEEAQ False False AGELTPEEEAQ 50.18299 608.274340808392 1603575.875 9580.0 ENSG00000178372|ENST00000380332|CALML5 6.99379285176595 2.0 True 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9596 50.197 800.0 171430.0 25 0 15371.0 + -1 EAGPPQPMV 9 102 925.4449229594338 0 925.444384753704 PEAK CID FTMS 0 0 0 9580 139911.234375 0.5235491061509742 -1 0.092437744140625 16 nc|ENSG00000163346|Q96AQ6-2|PBXIP1;nc|ENSG00000163346|Q96AQ6-3|PBXIP1;ENSG00000163346|ENST00000368463|PBXIP1 3 VMPEQPA 7 -1 45.386 0.0 0.0 2.4548 0.0 0.0 942.450501581174 151.05135523013908 1093.501856811313 0.0 0.0 0.0 0.0 0 0.0 0.0 1.5356668758921828 0.6989700043360187 VMPEQPA 2.4548 - 4181 + 1 1.473 92802.6 0.8399999737739563 4328 5266 9580 HBL1_DMSO_200M_050219_1,9596 HBL1_DMSO_200M_050219_1,9596, False False EAGPPQPMV 50.196838 925.444384753704 2037838.5 9580.0 nc|ENSG00000163346|Q96AQ6-2|PBXIP1;;nc|ENSG00000163346|Q96AQ6-3|PBXIP1;;ENSG00000163346|ENST00000368463|PBXIP1 6.542250474294026 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9597 50.212 800.0 219520.0 25 0 10956.0 + 19608 LGASPAVRL 9 232 442.2721000519509 882.5296471707018 2 442.2724792361259 MULTI CID FTMS 0 0 0 9580 118183.03125 0.7058340359434658 2 -0.1767768859863281 17 Unmodified _LGASPAVRL_ REV__chr21:43798049-43799570|22|15.55|0.8|4.29|+|0|None,RRP1|1 28.486842064014134 0.1687311288560894 3 {[VA]|[{I|L}G]}SPA 5 -1 39.08 0.0 0.0 4.4282 0.0 0.0 0.0 454.2789792400292 454.2789792400292 22.82249996395486 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.5 0.0 {[VA]|[{I|L}G]}SPA 4.4282 - 581 + 1 1.473 133519.9 0.6800000071525574 4329 5266 9580 HBL1_DMSO_200M_050219_1,9597 HBL1_DMSO_200M_050219_1,9597,LGASPAVRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9599 50.217 31.0 2023400.0 25 0 180520.0 + 39214 TYVTPRRPF 9 76 379.5452557090981 1135.6139377274944 3 379.5450317263603 MULTI CID FTMS 0 0 0 9598 1406378.875 0.531322938051439 1 -0.0727882385253906 1 Unmodified _TYVTPRRPF_ ENSG00000170889|ENST00000302907|RPS9;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 29.081581746732265 0.1611639662936252 3 TYVT 4 5 54.557 0.0 0.0 4.8042 0.0 0.0 0.0 668.3632467549131 668.3632467549131 47.56773019264563 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.4247425010840047 0.0 + TYVT 4.8042 + + 98 + 1 1.484 56978.9 1.0 4330 5267 9598 HBL1_DMSO_200M_050219_1,9599 HBL1_DMSO_200M_050219_1,9599,TYVTPRRPF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9600 50.218 31.0 1402400.0 25 0 186140.0 + 23088 LSLWLENV 8 77 487.2692232672081 972.5238936012164 2 487.2695190310478 MULTI CID FTMS 0 0 0 9598 1461377.25 0.6541348183716986 1 -0.0727882385253906 2 Unmodified _LSLWLENV_ REV__MER97b_dup20|chr2:97740228-97740619:+|1.0489492301760506|0.3406638822177393|1.62|48.0|7|2|sense 21.74664581756881 0.5868176546531598 3 {[TV]|[{I|L}S]}{I|L} 3 -1 34.705 0.0 0.0 3.5685 0.0 0.0 0.0 656.3021334283811 656.3021334283811 22.92226329887773 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L} 3.5685 + + 52 + 1 1.484 39023.0 1.0 4331 5267 9598 HBL1_DMSO_200M_050219_1,9600 HBL1_DMSO_200M_050219_1,9600,LSLWLENV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9601 50.219 8.0 6084700.0 25 0 1219800.0 + 15712 IQVTKVTQV 9 78 508.31081434427887 1014.6070757553578 2 508.3109924197197 MULTI CID FTMS 0 0 0 9598 7633659.0 1.0 0 0.0 3 Unmodified _IQVTKVTQV_ ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1 62.57269311338072 0.0246576765497938 3 [Q{I|L}]VSKT{I|L}N{I|L} 9 5 + 45.492 0.0 0.0 4.4837 4.4837 78.901 0.0 0.0 0.0 5.56810945375765 9.424230533946918 5.56810945375765 5.56810945375765 0 1.1331596456423734 0.0 0.3252574989159953 0.805462187404089 [Q{I|L}]VSKT{I|L}N{I|L};[KT]VVTQ{I|L}N{I|L};[KT]VVQT{I|L}N{I|L};[Q{I|L}]VSK{I|L}TN{I|L};[KT]VVQ{I|L}TN{I|L};[KT]VVT[AG]{I|L}N{I|L};[KT]VV[AG]T{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SKT{I|L}N{I|L};[KT]VV[AG]{I|L}TN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SK{I|L}TN{I|L} 4.4837;3.9349;3.918;3.8664;3.3007;3.0274;3.0104;2.8053;2.3931;2.1881 -;-;-;-;-;-;-;-;-;- 329 1 1.484 41938.7 1.0 4332 5267 9598 HBL1_DMSO_200M_050219_1,9601 HBL1_DMSO_200M_050219_1,9601,IQVTKVTQV True True IQVTKVTQV 50.218927 508.31099241972 81972728.0 9598.0 nc|ENSG00000095139|P48444-2|ARCN1;;ENSG00000095139|ENST00000264028|ARCN1 6.028322219848633 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9602 50.22 23.0 2703100.0 25 0 439010.0 + 5757 DPPDGIKV 8 76 420.7266170421713 839.4386811511426 2 420.7267333865166 MULTI CID FTMS 0 0 0 9598 2633169.75 1.0 0 0.0 4 Unmodified _DPPDGIKV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 29.081581746732265 0.4323690340403521 3 DPPD{[VA]|[{I|L}G]}KV 8 0 + 62.076 0.0 0.0 7.395 7.395 96.306 0.0 0.0 0.0 42.86297847284061 6.911225100727592 6.911225100727592 62.07625045844914 0 0.7742275032520141 2.0 0.0 0.0 + + DPPD{[VA]|[{I|L}G]}KV 7.395 + + 114 + 1 1.484 55550.8 1.0 4333 5267 9598 HBL1_DMSO_200M_050219_1,9602 HBL1_DMSO_200M_050219_1,9602,DPPDGIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9603 50.221 23.0 2320100.0 25 0 224170.0 + 24970 MPPPPPQGV 9 92 460.2385793050109 918.462605676822 2 460.2388183474541 MULTI CID FTMS 0 0 0 9598 2550775.0 0.0847337617056514 44 -4.0479888916015625 5 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 3 P[{M(Oxidation (M))|F}T]GV 5 6 23.5 0.0 0.0 2.5586 0.0 0.0 399.21079094530427 0.0 399.21079094530427 0.0 -6.510234424404686 -6.510234424404686 0.0 0 0.7302046884880937 0.0 0.0 0.0 P[{M(Oxidation (M))|F}T]GV 2.5586 - 149 + 1 1.484 46251.3 1.0 4334 5267 9598 HBL1_DMSO_200M_050219_1,9603 HBL1_DMSO_200M_050219_1,9603,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9604 50.222 40.0 1911200.0 25 0 240790.0 + 2083 APPPPPPQL 9 98 457.2609047129245 912.507256492649 2 457.2606994509697 MULTI CID FTMS 0 0 0 9598 1463561.0 1.0 0 0.0 6 Unmodified _APPPPPPQL_ REV__ENSG00000167476|ENST00000300961|JSRP1;REV__ENSG00000185950|ENST00000375856|IRS2 106.8454739257335 0.0073671968602159 3 [PA]PPPPPQ{I|L} 9 -1 + 76.705 0.0 0.0 8.4059 8.4059 97.23 0.0 0.0 0.0 7.6329657522032335 7.6329657522032335 7.6329657522032335 28.812281309285623 0 2.468765315847925 2.0 0.0 0.9163865622122672 [PA]PPPPPQ{I|L};[PA]P[YK]PQ{I|L};[PA][YK]PPQ{I|L};[PA]PP[KS]{[VA]|[{I|L}G]}{M(Oxidation (M))|F};{[HG]|PP}APPPPQ{I|L};[PA]PP[YK]Q{I|L};[Q{I|L}]{M(Oxidation (M))|F}APPQ{I|L};[PA]{[WT]|[RM]}[Q{I|L}]VV;{[HG]|PP}AP[YK]Q{I|L};{[HG]|PP}A[YK]PQ{I|L} 8.4059;5.2485;5.1052;5.0993;4.4999;4.2036;2.5793;1.245;1.134;1.134 +;-;-;-;-;-;-;-;-;- + 460 + 1 1.484 63639.9 1.0 4335 5267 9598 HBL1_DMSO_200M_050219_1,9604 HBL1_DMSO_200M_050219_1,9604,APPPPPPQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9605 50.224 40.0 1276900.0 25 0 155430.0 + 25082 MPVTPQASV 9 89 465.2414669011508 928.4683808691016 2 465.2416564822197 MULTI CID FTMS 0 0 0 9598 1126942.125 0.9323038788356358 -2 0.1964263916015625 7 Unmodified _MPVTPQASV_ ENSG00000115825|ENST00000234179|PRKD3;ENST00000494667.5_1_2:37496701-37543667:-|nuORF;nc|ENSG00000115825|O94806-2|PRKD3 25.399314129420983 0.2080152500878129 3 [TA]HRGMA 7 8 39.78 0.0 0.0 4.2845 0.0 0.0 0.0 201.08676400802668 201.08676400802668 19.32167667419833 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [TA]HRGMA 4.2845 - 456 1 1.484 46787.3 1.0 4336 5267 9598 HBL1_DMSO_200M_050219_1,9605 HBL1_DMSO_200M_050219_1,9605,MPVTPQASV False True MPVTPQASV 50.223642 465.24165648222 31758662.0 9598.0 nc|ENSG00000115825|O94806-2|PRKD3;;ENSG00000115825|ENST00000234179|PRKD3;;ENST00000494667.5_1_2:37496701-37543667:-|nuORF 2.831566413243612 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9606 50.225 60.0 977370.0 25 0 93724.0 + 3660 DAEMTTRMV 9 84 527.238406153333 1052.462259373466 2 527.2388793826103 MULTI CID FTMS 0 0 0 9598 934736.875 0.0114620354275858 11 -0.8300132751464844 8 Unmodified _DAEMTTRMV_ ENSG00000205220|ENST00000358514|PSMB10 41.95555342248728 0.0647214845423414 3 {[DA]|[EG]}EMTTRMV 9 0 + 77.546 0.0 0.0 7.3681 7.3681 88.336 0.0 0.0 0.0 51.348116318729 4.366046437030349 4.366046437030349 5.981278667637611 0 1.3494850021680094 2.0 0.8494850021680094 0.0 + + {[DA]|[EG]}EMTTRMV;{[DA]|[EG]}EMTT{I|L}C(Carbamidomethyl (C)){I|L};{[DA]|[EG]}EMTT{I|L}{[CA]|SS}V;{[DA]|[EG]}E[W{M(Oxidation (M))|F}]RMV;{[DA]|[EG]}EM[HK][HS]V;{[DA]|[EG]}E[W{M(Oxidation (M))|F}]{I|L}C(Carbamidomethyl (C)){I|L};{[DA]|[EG]}{M(Oxidation (M))|F}[WE]RMV;{[DA]|[EG]}E[W{M(Oxidation (M))|F}]{I|L}{[CA]|SS}V;{[DA]|[EG]}E{[RE]|[WV]}[{M(Oxidation (M))|F}T]W;[{M(Oxidation (M))|F}T]RTTM[C(Carbamidomethyl (C))H] 7.3681;6.7997;6.1532;4.8534;4.323;4.2851;4.0923;4.037;3.8609;3.8434 +;-;-;-;-;-;-;-;-;- + 179 + 1 1.484 52417.1 1.0 4337 5267 9598 HBL1_DMSO_200M_050219_1,9606 HBL1_DMSO_200M_050219_1,9606,DAEMTTRMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9607 50.227 55.0 1007100.0 25 0 59785.0 + 13024 HASQPSLTV 9 97 470.2484443846493 938.4823358360984 2 470.2480346560478 MULTI CID FTMS 0 0 0 9598 940917.6875 0.0665230336888396 12 -0.9492759704589844 9 Unmodified _HASQPSLTV_ ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000175387|Q15796-2|SMAD2 37.97399986684836 0.0865783450051559 3 EV 2 8 22.351 0.0 0.0 2.3816 0.0 0.0 692.3594837873062 0.0 692.3594837873062 0.0 9.21756774434795 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 EV 2.3816 - 131 1 1.484 48861.9 1.0 4338 5267 9598 HBL1_DMSO_200M_050219_1,9607 HBL1_DMSO_200M_050219_1,9607,HASQPSLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9608 50.229 96.0 567160.0 25 0 78107.0 + 6373 DVYESSVKV 9 100 513.2614016930279 1024.5082504528557 2 513.2604247927666 MULTI CID FTMS 0 0 0 9598 550027.1875 0.210439879867724 3 -0.2767105102539062 10 Unmodified _DVYESSVKV_ ENSG00000042429|ENST00000251871|MED17 31.26834338654808 0.1333407332142048 3 [DV]YES[VS]KV 9 0 + 50.345 0.0 0.0 4.9141 4.9141 87.477 0.0 0.0 0.0 30.423421880375223 6.404784322338557 6.404784322338557 26.682437647924218 0 0.7742275032520141 2.0 0.0 0.2302046884880938 + + [DV]YES[VS]KV;[DV][C(Carbamidomethyl (C))K][YN]KV;{[{M(Oxidation (M))|F}D]|MM}Y[PA][VS]KV 4.9141;2.3096;0.37599 +;-;- + 118 + 1 1.484 45555.3 1.0 4339 5267 9598 HBL1_DMSO_200M_050219_1,9608 HBL1_DMSO_200M_050219_1,9608,DVYESSVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9609 50.232 168.0 818270.0 25 0 83491.0 -1 0 133 336.72382896560026 671.4331049980005 2 336.7234985232353 MULTI CID FTMS 0 0 0 9598 476032.5 0.3462465634556248 1 -0.0727882385253906 11 3 AV{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6 -1 + 64.2 0.0 0.0 9.5616 9.5616 99.276 0.0 0.0 0.0 54.99159686636801 10.839993556128109 10.839993556128109 64.19978440589176 0 0.3807196863200844 2.0 0.6747425010840047 0.0 AV{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9.5616 - 76 + 1 1.484 111376.1 1.0 4340 5267 9598 HBL1_DMSO_200M_050219_1,9609 HBL1_DMSO_200M_050219_1,9609, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9610 50.234 118.0 442940.0 25 0 68141.0 + 13985 HYYDYPSIAH 10 80 633.2829721524655 1264.551391371731 2 633.2830078005791 MULTI CID FTMS 0 0 0 9598 451376.21875 1.0 0 0.0 12 Unmodified _HYYDYPSIAH_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 62.57269311338072 0.0298375429882549 3 HYYDY 5 5 74.196 0.0 0.0 5.8674 0.0 0.0 0.0 520.2524175256233 520.2524175256233 52.74227503252014 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.4247425010840047 0.0 + HYYDY 5.8674 + + 53 + 1 1.484 45704.7 1.0 4341 5267 9598 HBL1_DMSO_200M_050219_1,9610 HBL1_DMSO_200M_050219_1,9610,HYYDYPSIAH True True HYYDYPSIAH 50.234371 633.283007800579 3841513.0 9598.0 nc|ENSG00000150093|P05556-2|ITGB1;;nc|ENSG00000150093|P05556-4|ITGB1;;nc|ENSG00000150093|P05556-5|ITGB1;;ENSG00000150093|ENST00000302278|ITGB1;;nc|ENSG00000150093|P05556-3|ITGB1 8.121370474497477 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9611 50.239 229.0 315130.0 25 0 31279.0 + + -1 VYYTGNSGAEAAM 13 129 667.2898652435917 1332.5651775539834 2 667.2906982302666 MULTI CID FTMS 0 0 0 9598 414580.40625 1.0 0 0.0 13 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))LPLDNAEC(Carbamidomethyl (C))L_ ENSG00000111667|ENST00000229268|USP5;nc|ENSG00000111667|P45974-2|USP5;ENST00000537267.5_1_12:6966716-6975238:+|nuORF;ENST00000542371.1_1_12:6972998-6973244:+|nuORF 15.248480904072842 0.7179608125786238 3 [YV]YP{M(Oxidation (M))|F}[TA]AE{[WS]|[C(Carbamidomethyl (C)){I|L}]} 11 -1 + 50.098 0.0 0.0 3.7595 3.7595 75.341 0.0 0.0 0.0 4.259687322722812 4.259687322722812 4.259687322722812 4.259687322722812 0 0.2614393726401688 2.0 0.805462187404089 0.0 [YV]YP{M(Oxidation (M))|F}[TA]AE{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]EA[TA]{M(Oxidation (M))|F}PY{I|L}M;[YV]YT[WE]AE{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YV]YT[NG][SG]AE{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YV]Y{M(Oxidation (M))|F}D[PG]AE{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]EA[WE]TY{I|L}M;[YQ]EA[SG][NG]TY{I|L}M;[YV]Y{M(Oxidation (M))|F}D[QP]E{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]EA[PG]D{M(Oxidation (M))|F}Y{I|L}M;YYA[NS]A[TA]AE{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.7595;3.4399;3.3982;3.2879;3.1058;3.0785;2.9683;2.8713;2.7861;2.7758 -;-;-;-;-;-;-;-;-;- 1879 1 1.484 53697.4 1.0 4342 5267 9598 HBL1_DMSO_200M_050219_1,9611 HBL1_DMSO_200M_050219_1,9611,ECLPLDNAECL False False VYYTGNSGAEAAM 50.238692 667.290698230267 2297787.25 9598.0 ENSG00000111667|ENST00000229268|USP5;;nc|ENSG00000111667|P45974-2|USP5;;ENST00000537267.5_1_12:6966716-6975238:+|nuORF;;ENST00000542371.1_1_12:6972998-6973244:+|nuORF 6.2999881108601885 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9612 50.244 262.0 355990.0 25 0 37297.0 8629 EVEEDEYKAFY 11 126 711.3069763201012 1420.5993997070022 2 711.3078491091728 MULTI CID FTMS 0 0 0 9598 394234.125 0.0098600189830203 17 -1.2445640563964844 14 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 3 ANEQA[HD]{M(Oxidation (M))|F}Y 9 8 61.08 0.0 0.0 4.2996 0.0 0.0 327.1536191682838 0.0 327.1536191682838 0.0 26.365680223695264 0.0 0.0 0 0.3494850021680094 0.0 1.1861818737241734 0.2614393726401688 ANEQA[HD]{M(Oxidation (M))|F}Y 4.2996 - 4969 + 1 1.484 69850.2 1.0 4343 5267 9598 HBL1_DMSO_200M_050219_1,9612 HBL1_DMSO_200M_050219_1,9612,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9613 50.246 90.0 582840.0 25 0 43191.0 + 25314 NAGPPSHII 9 104 453.24574919642566 904.4769454596512 2 453.2453491091728 MULTI CID FTMS 0 0 0 9598 356676.46875 0.1678834202890637 5 -0.3995437622070312 15 Unmodified _NAGPPSHII_ ENSG00000132128|ENST00000617190|LRRC41;nc|ENSG00000132128|Q15345-3|LRRC41 16.942295170755138 0.3780752226737986 3 V 1 9 12.764 0.0 0.0 1.4112 0.0 0.0 787.3976359277162 0.0 787.3976359277162 0.0 2.306634937682153 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4112 - 85 + 1 1.484 46149.9 1.0 4344 5267 9598 HBL1_DMSO_200M_050219_1,9613 HBL1_DMSO_200M_050219_1,9613,NAGPPSHII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9614 50.249 180.0 580790.0 25 0 102740.0 + 4498 DAYIPRTGV 9 96 496.2640223751811 990.5134918171624 2 496.2638122439384 MULTI CID FTMS 0 0 0 9598 276179.53125 0.0764142649748958 -2 0.1964263916015625 16 Unmodified _DAYIPRTGV_ ENSG00000164074|ENST00000645843|ABHD18;ENST00000473040.6_1_4:128905516-128956965:+|nuORF;nc|ENSG00000164074|Q0P651-2|ABHD18;nc|ENSG00000164074|Q0P651-3|ABHD18;nc|ENSG00000164074|Q0P651-4|ABHD18;nc|ENSG00000164074|Q0P651|ABHD18 26.268140514670165 0.1969607489560049 3 {[DA]|[EG]}Y{I|L}P[WK]V 8 3 + 50.679 0.0 0.0 5.1165 5.1165 88.883 0.0 0.0 0.0 39.56994074453036 2.2235719422483413 2.2235719422483413 50.67918449261214 0 0.9247425010840048 1.6989700043360187 0.0 0.3807196863200844 {[DA]|[EG]}Y{I|L}P[WK]V 5.1165 - 74 + 1 1.484 85731.0 1.0 4345 5267 9598 HBL1_DMSO_200M_050219_1,9614 HBL1_DMSO_200M_050219_1,9614,DAYIPRTGV False True DAYIPRTGV 50.24901 496.263812243938 42843772.0 9598.0 nc|ENSG00000164074|Q0P651-3|ABHD18;;nc|ENSG00000164074|Q0P651-2|ABHD18;;ENST00000473040.6_1_4:128905516-128956965:+|nuORF;;nc|ENSG00000164074|Q0P651-4|ABHD18;;ENSG00000164074|ENST00000645843|ABHD18;;nc|ENSG00000164074|Q0P651|ABHD18 5.492040952046712 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9615 50.252 165.0 348770.0 25 0 52388.0 + + -1 RIADKEVTIKV 11 68 424.2079132297366 0 424.2072936892509 PEAK CID FTMS 0 0 0 9598 287764.375 0.6427733699061114 1 -0.0727882385253906 17 Carbamidomethyl (C),Oxidation (M) _HLC(Carbamidomethyl (C))M(Oxidation (M))LFSPHL_ ENSG00000102763|ENST00000379310|VWA8;nc|ENSG00000102763|A3KMH1-3|VWA8;nc|ENSG00000102763|A3KMH1-2|VWA8 6.630372943996041 0.3961065659209837 3 C(Carbamidomethyl (C))E 2 -1 9.213 0.0 0.0 1.0885 0.0 0.0 422.264934270217 132.04572473697502 554.310659007192 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 C(Carbamidomethyl (C))E 1.0885 - 23 + 1 1.484 51475.7 1.0 4346 5267 9598 HBL1_DMSO_200M_050219_1,9615 HBL1_DMSO_200M_050219_1,9615,HLCMLFSPHL False False RIADKEVTIKV 50.252248 424.207293689251 1590804.875 9598.0 ENSG00000102763|ENST00000379310|VWA8;;nc|ENSG00000102763|A3KMH1-3|VWA8;;nc|ENSG00000102763|A3KMH1-2|VWA8 3.182449022928873 3.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9616 50.266 782.0 194160.0 25 0 14683.0 + 17563 KPQNERILL 9 157 555.8347314852398 1109.6549100372797 2 555.8358032107353 MULTI CID FTMS 0 0 0 9598 220415.65625 1.0 0 0.0 18 Unmodified _KPQNERILL_ REV__ENSG00000115616|ENST00000233969|SLC9A2 24.020572477871973 0.2255576514309169 3 KPTS 4 -1 43.047 0.0 0.0 3.8794 0.0 0.0 0.0 693.3973938688748 693.3973938688748 13.596981436199016 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.0 KPTS 3.8794 - 578 + 1 1.484 120621.7 1.0 4347 5267 9598 HBL1_DMSO_200M_050219_1,9616 HBL1_DMSO_200M_050219_1,9616,KPQNERILL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9617 50.271 276.0 733310.0 25 0 269260.0 + 17241 KLLRLNLQR 9 97 385.2560642983677 1152.746363495303 3 385.2558776736259 MULTI CID FTMS 0 0 0 9598 223087.0 1.0 0 0.0 19 Unmodified _KLLRLNLQR_ REV__ENSG00000188554|ENST00000590996|NBR1 4.5288652416199255 0.7565837746943351 3 K{I|L}A 3 -1 30.445 0.0 0.0 2.6411 0.0 0.0 0.0 837.5062393852132 837.5062393852132 27.34636880228201 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 K{I|L}A 2.6411 - 21 + 1 1.484 161952.2 1.0 4348 5267 9598 HBL1_DMSO_200M_050219_1,9617 HBL1_DMSO_200M_050219_1,9617,KLLRLNLQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9618 50.285 800.0 48561.0 25 0 13558.0 -1 0 25 1158.1412909189787 3471.4020433571363 3 1158.476245105267 MULTI CID FTMS 0 0 0 9598 208145.90625 0.1113921184713131 5 -0.3995437622070312 20 3 E 1 -1 6.9897 0.0 0.0 0.20135 0.0 0.0 2815.1745175776427 524.1614260170264 3339.335943594669 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20135 - 4 + 1 1.484 42692.9 0.6899999976158142 4349 5267 9598 HBL1_DMSO_200M_050219_1,9618 HBL1_DMSO_200M_050219_1,9618, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9620 50.29 74.0 502580.0 25 0 51162.0 + 45202 YQVAAAESHPL 11 63 593.2981899963888 1184.5818270595776 2 593.2986328005791 MULTI CID FTMS 0 0 0 9619 403688.28125 0.2634849019241662 2 -0.2039222717285156 1 Unmodified _YQVAAAESHPL_ ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 36.506200033944 0.2662161991516171 3 [YQ]VAAAESH[{I|L}P] 11 0 + 42.216 0.0 0.0 3.5638 3.5638 81.096 0.0 0.0 0.0 29.106607529462245 4.981979378655865 4.981979378655865 10.063445347660045 0 0.8807196863200843 0.0 0.0 0.0 + + [YQ]VAAAESH[{I|L}P];[YQ]V[YV]AAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]VA[RD]SH[{I|L}P];[YQ]V{[NV]|[RG]}ESH[{I|L}P];[YQ][Q{I|L}]AESH[{I|L}P];[YQ]V[YV][Q{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ][KQ]{[QG]|[NA]}SH[{I|L}P] 3.5638;2.7142;2.4423;1.6799;1.3585;1.2561;0.28385 +;-;-;-;-;-;- + 136 + 1 1.488 36300.1 1.0 4350 5268 9619 HBL1_DMSO_200M_050219_1,9620 HBL1_DMSO_200M_050219_1,9620,YQVAAAESHPL False True YQVAAAESHPL 50.290085 593.298632800579 19120230.0 9619.0 ENST00000416120.1_1_6:64259201-64259360:-|nuORF;;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 7.157349586486816 2.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9621 50.293 121.0 452490.0 25 0 29912.0 24575 MLGWVQRVL 9 92 367.8783621820597 1100.613257146379 3 367.8781310915947 MULTI CID FTMS 0 0 0 9619 200650.53125 0.1121909602226368 2 -0.2039222717285156 2 Unmodified _MLGWVQRVL_ ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000070729|Q14028-3|CNGB1;nc|ENSG00000070729|Q14028-4|CNGB1 15.847184025352805 0.4077185912009129 3 M{I|L}NEV{I|L}{I|L} 7 5 52.127 0.0 0.0 4.7362 0.0 0.0 0.0 285.1312655084594 285.1312655084594 45.70062291009734 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 M{I|L}NEV{I|L}{I|L} 4.7362 - 100 + 1 1.488 51115.0 1.0 4351 5268 9619 HBL1_DMSO_200M_050219_1,9621 HBL1_DMSO_200M_050219_1,9621,MLGWVQRVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9622 50.294 82.0 659160.0 25 0 84912.0 -1 MLLPGDKI 8 67 451.7530328454394 901.4915127576788 2 451.7526428103447 MULTI CID FTMS 0 0 0 9619 489717.78125 0.5269584982120499 1 -0.1094131469726562 3 Oxidation (M) _M(Oxidation (M))LLPGDKI_ ENSG00000257743|ENST00000477922|MGAM2 18.13498045792455 0.6430038125133779 3 YP{I|L} 3 -1 46.95 0.0 0.0 5.2081 0.0 0.0 0.0 525.2675875299436 525.2675875299436 34.47621246364342 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YP{I|L} 5.2081 - 52 + 1 1.488 48665.3 1.0 4352 5268 9619 HBL1_DMSO_200M_050219_1,9622 HBL1_DMSO_200M_050219_1,9622,MLLPGDKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9623 50.296 83.0 646080.0 25 0 81795.0 + 36599 TANSKIVVV 9 90 465.7846991431704 929.5548453531408 2 465.7844116091728 MULTI CID FTMS 0 0 0 9619 394265.40625 0.5117081518299138 1 -0.1094131469726562 4 Unmodified _TANSKIVVV_ ENSG00000111716|ENST00000350669|LDHB;ENST00000470280.1_1_12:21796836-21807485:-|nuORF 34.40172386719151 0.1061884637610825 3 [TA][NS]K{I|L}VVV 9 0 + 38.525 0.0 0.0 4.1444 4.1444 82.872 0.0 0.0 0.0 7.739824496852137 27.1047681037662 7.739824496852137 10.82671007563312 0 0.6549471895720985 1.5228787452803376 0.7134679910804405 0.0 + + [TA][NS]K{I|L}VVV;{[DA]|[EG]}KKTAVVV;{[DA]|[EG]}KKATVVV;{[SA]|[TG]}{[QS]|[NT]}K{I|L}VVV;[VS][KQ]TAVVV;{[QS]|[NT]}{[SA]|[TG]}K{I|L}VVV;{[SA]|[TG]}G{[SA]|[TG]}K{I|L}VVV;{[QS]|[NT]}[KG]T{I|L}VVV;{[SA]|[TG]}G[KG]T{I|L}VVV;[VS][KQ]ATVVV 4.1444;2.9797;2.4664;2.2675;2.2146;2.1823;2.1331;1.8585;1.8092;1.7013 +;-;-;-;-;-;-;-;-;- + 176 1 1.488 46348.7 1.0 4353 5268 9619 HBL1_DMSO_200M_050219_1,9623 HBL1_DMSO_200M_050219_1,9623,TANSKIVVV True True TANSKIVVV 50.296304 465.784411609173 3979200.5 9619.0 ENSG00000111716|ENST00000350669|LDHB;;ENST00000470280.1_1_12:21796836-21807485:-|nuORF 3.876216570536296 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9624 50.31 763.0 266650.0 25 0 21598.0 + -1 ADDDDDEMEEP 11 187 648.7088116794157 1295.4030704256313 2 648.7088500857353 MULTI CID FTMS 0 0 0 9619 185083.8125 1.0 0 0.0 5 Oxidation (M) _ADDDDDEM(Oxidation (M))EEP_ REV__ENSG00000171634|ENST00000306378|BPTF;REV__nc|ENSG00000171634|Q12830-4|BPTF;REV__nc|ENSG00000171634|Q12830|BPTF 1.1933415558491238 0.8695176722560516 3 AT{I|L}AD 5 -1 30.292 0.0 0.0 2.3384 0.0 0.0 97.97683682743724 723.1538179986936 821.1306548261309 0.0 0.0 0.0 0.0 0 0.0 0.0 1.9489700043360187 0.0 AT{I|L}AD 2.3384 - 560 + 1 1.488 156971.8 1.0 4354 5268 9619 HBL1_DMSO_200M_050219_1,9624 HBL1_DMSO_200M_050219_1,9624,ADDDDDEMEEP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9625 50.323 800.0 163440.0 25 0 9620.6 -1 NEFCECYTC 9 150 641.71393373706 1281.4133145409198 2 641.7136718630791 MULTI CID FTMS 0 0 0 9619 165612.359375 1.0 0 0.0 6 3 Carbamidomethyl (C) _NEFC(Carbamidomethyl (C))EC(Carbamidomethyl (C))YTC(Carbamidomethyl (C))_ ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF;nc|ENSG00000110066|Q4FZB7-2|KMT5B 4.3292370932331545 0.7635526921153418 3 {[QS]|[NT]}C(Carbamidomethyl (C))MDEEN 8 -1 15.996 0.0 0.0 1.2483 0.0 0.0 0.0 285.0475057853136 285.0475057853136 0.5898880008368828 0.0 0.0 0.0 0 0.0 0.619788758288394 0.9049471895720984 0.1344005005252609 {[QS]|[NT]}C(Carbamidomethyl (C))MDEEN 1.2483 - 922 1 1.488 105766.6 0.9900000095367432 4355 5268 9619 HBL1_DMSO_200M_050219_1,9625 HBL1_DMSO_200M_050219_1,9625,NEFCECYTC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9626 50.337 800.0 289060.0 25 0 68869.0 + 34891 SQIDPSSIERA 11 152 601.8039180680785 1201.5932832029569 2 601.8027221560478 MULTI CID FTMS 0 0 0 9619 146288.921875 0.0171672343010886 9 -0.6794548034667969 7 Unmodified _SQIDPSSIERA_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 43.476825903602695 0.1588371419577413 3 {[QS]|[NT]}{I|L}DPS 6 5 53.158 0.0 0.0 4.424 0.0 0.0 0.0 571.2876070611936 571.2876070611936 41.4043675664908 0.0 0.0 0.0 0 1.5 1.0969100130080565 0.6989700043360187 0.0 + {[QS]|[NT]}{I|L}DPS 4.424 + + 952 + 1 1.488 165857.8 0.9800000190734864 4356 5268 9619 HBL1_DMSO_200M_050219_1,9626 HBL1_DMSO_200M_050219_1,9626,SQIDPSSIERA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9627 50.351 800.0 62713.0 25 0 7219.8 + -1 TCTCMCACACM 11 88 656.1911725949061 0 656.1910278201103 PEAK CID FTMS 0 0 0 9619 147216.0 1.0 0 0.0 8 3 Carbamidomethyl (C) _TC(Carbamidomethyl (C))TC(Carbamidomethyl (C))MCAC(Carbamidomethyl (C))ACM_ REV__ENST00000544665.7_1_16:31343047-31343377:+|nuORF 0.3070304955306653 0.4761840153648598 3 G 1 -1 5.4846 0.0 0.0 0.41855 0.0 0.0 713.1515579810247 537.1747530572874 1250.326311038312 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.41855 - 4 + 1 1.488 44081.3 0.959999978542328 4357 5268 9619 HBL1_DMSO_200M_050219_1,9627 HBL1_DMSO_200M_050219_1,9627,TCTCMCACACM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9628 50.365 800.0 321860.0 25 0 30426.0 + 17898 KQQDHFFQA 9 255 383.5209160798496 1147.5409188397489 3 383.5204955935478 MULTI CID FTMS 0 0 0 9619 129955.71875 0.8896881457651711 1 -0.1094131469726562 9 Unmodified _KQQDHFFQA_ ENSG00000115956|ENST00000234313|PLEK 17.11289562659939 0.3734572693229295 3 N{M(Oxidation (M))|F}{M(Oxidation (M))|F}[QA] 5 5 19.521 0.0 0.0 1.7011 0.0 0.0 522.2483998029312 0.0 522.2483998029312 0.0 0.796896906561031 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 N{M(Oxidation (M))|F}{M(Oxidation (M))|F}[QA] 1.7011 - 485 1 1.488 199276.8 0.6800000071525574 4358 5268 9619 HBL1_DMSO_200M_050219_1,9628 HBL1_DMSO_200M_050219_1,9628,KQQDHFFQA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9629 50.38 800.0 189800.0 25 0 15326.0 -1 0 171 557.9698885087846 0 557.6356078982353 PEAK CID FTMS 0 0 0 9619 31657.91015625 1.0 0 0.0 10 3 G{I|L}A[KA]VQT 8 -1 29.338 0.0 0.0 2.6337 0.0 0.0 134.38186869872067 208.07325159244377 342.45512029116446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6382104921644451 0.5866968715561641 G{I|L}A[KA]VQT 2.6337 - 916 + 1 1.488 114766.3 0.800000011920929 4359 5268 9619 HBL1_DMSO_200M_050219_1,9629 HBL1_DMSO_200M_050219_1,9629, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9630 50.394 800.0 47154.0 25 0 7867.7 -1 0 34 1061.4141337873662 3181.220571962299 3 1061.746020495892 MULTI CID FTMS 0 0 0 9619 98840.3515625 1.0 0 0.0 11 3 TVV 3 -1 12.307 0.0 0.0 0.38687 0.0 0.0 2236.724979776556 642.2868746393186 2879.011854415874 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TVV 0.38687 - 23 + 1 1.488 38167.4 0.5400000214576721 4360 5268 9619 HBL1_DMSO_200M_050219_1,9630 HBL1_DMSO_200M_050219_1,9630, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9632 50.399 27.0 1703000.0 25 0 184070.0 + 2491 AQYEHDLEVA 10 68 587.7724929962113 1173.5304330592226 2 587.7724487185478 MULTI CID FTMS 0 0 0 9631 2093523.625 0.4095115991115449 2 -0.1961402893066406 1 Unmodified _AQYEHDLEVA_ ENSG00000132341|ENST00000543796|RAN;ENST00000413691.2_1_4:174554896-174555010:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 24.99096001346401 0.4071966087057876 3 D{I|L}EVA 5 5 29.565 0.0 0.0 2.5193 0.0 0.0 628.2607289044937 0.0 628.2607289044937 0.0 1.4165061435177506 0.0 0.0 0 0.6549471895720985 0.0 0.3807196863200844 0.0 + D{I|L}EVA 2.5193 + + 187 1 1.488 44833.4 1.0 4361 5269 9631 HBL1_DMSO_200M_050219_1,9632 HBL1_DMSO_200M_050219_1,9632,AQYEHDLEVA False True AQYEHDLEVA 50.398687 587.772448718548 58531248.0 9631.0 ENST00000413691.2_1_4:174554896-174555010:-|nuORF;;ENST00000455094.1_1_6:30454046-30454364:+|nuORF;;ENSG00000132341|ENST00000543796|RAN 6.875439961751302 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9633 50.4 33.0 3164500.0 25 0 300370.0 + 2721 ATGENLPRV 9 112 478.7617759464704 955.5089989597408 2 478.7616149783134 MULTI CID FTMS 0 0 0 9631 2167277.0 0.6660034628061021 2 -0.1961402893066406 2 Unmodified _ATGENLPRV_ ENSG00000166181|ENST00000531273|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-6|API5 99.79894945604345 0.0109923542231827 3 ATGEN{I|L}V[RP] 9 2 + 101.4 0.0 0.0 10.612 10.612 89.668 0.0 0.0 0.0 34.97302484056647 3.9993452042126014 3.9993452042126014 3.9993452042126014 0 1.110924374808178 2.0 0.3807196863200844 1.4876954943324543 ATGEN{I|L}V[RP];ATGEN{I|L}PRV;ATGEVQV[RP];ATGEGG{I|L}V[RP];ATGEVQPRV;ATGENV{I|L}[RP];ATGEGG{I|L}PRV;ATGEV[AG]V[RP];ATGEVN{I|L}[RP];ATGEV[AG]PRV 10.612;10.193;9.9947;9.6482;9.5761;9.353;9.2296;9.031;8.7357;8.6124 -;+;-;-;-;-;-;-;-;- + 1025 + 1 1.488 83150.6 1.0 4362 5269 9631 HBL1_DMSO_200M_050219_1,9633 HBL1_DMSO_200M_050219_1,9633,ATGENLPRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9634 50.401 11.0 4886100.0 25 0 1024900.0 + 14561 IHPKHSLLL 9 86 353.2222034450059 1056.6447809352178 3 353.2219421267509 MULTI CID FTMS 0 0 0 9631 6855146.0 0.8753541964550506 -1 0.1094131469726562 3 Unmodified _IHPKHSLLL_ REV__ENST00000366812.5_1_1:226333267-226333390:-|nuORF 49.93300154707207 0.0405168250806675 3 {I|L}PH{I|L}H[KS]{I|L}{I|L} 9 -1 + 55.16 0.0 0.0 5.2203 5.2203 89.378 0.0 0.0 0.0 30.50234911887138 12.587418566968154 12.587418566968154 55.16048140234034 0 0.9247425010840048 0.0 0.6861818737241735 0.0 {I|L}PH{I|L}H[KS]{I|L}{I|L} 5.2203 - 422 + 1 1.488 53410.8 1.0 4363 5269 9631 HBL1_DMSO_200M_050219_1,9634 HBL1_DMSO_200M_050219_1,9634,IHPKHSLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9635 50.403 69.0 3094700.0 25 0 170240.0 + 15259 IPHIHKSLI 9 132 529.3293986398052 1056.6442443464102 2 529.3295165896416 MULTI CID FTMS 0 0 0 9631 1759460.75 1.0 0 0.0 4 Unmodified _IPHIHKSLI_ chr7:44834562-44835643|14|15.29|0.2|6.28|-|2|H2AZ2,None|2;ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-3|H2AZ2;nc|ENSG00000105968|Q71UI9-4|H2AZ2 110.6747026088012 0.0053351249510064 3 {I|L}PH{I|L}HKS{I|L}{I|L} 9 0 + 92.933 0.0 0.0 8.7951 8.7951 92.157 0.0 0.0 0.0 29.69126414008825 31.518929852098463 29.69126414008825 7.271212547196626 0 2.1554308145163983 1.5228787452803376 1.6307196863200843 0.0 + + {I|L}PH{I|L}HKS{I|L}{I|L};{I|L}P{I|L}HHKS{I|L}{I|L};{I|L}PH{I|L}HK{I|L}S{I|L};{I|L}P{I|L}HHK{I|L}S{I|L};{I|L}PH{I|L}{I|L}[HK]S{I|L};{I|L}{I|L}PHHKS{I|L}{I|L};{I|L}P{I|L}H{I|L}[HK]S{I|L};[H{I|L}]KS{I|L}HP{I|L}{I|L};{[TV]|[{I|L}S]}KH{I|L}HP{I|L}{I|L};[H{I|L}]KSH{I|L}P{I|L}{I|L} 8.7951;8.107;8.0924;7.4043;7.0998;6.5437;6.4116;6.3362;6.2445;5.9911 +;-;-;-;-;-;-;-;-;- + 3565 + 1 1.488 170330.6 1.0 4364 5269 9631 HBL1_DMSO_200M_050219_1,9635 HBL1_DMSO_200M_050219_1,9635,IPHIHKSLI True True IPHIHKSLI 50.402697 529.329516589642 79624468.0 9631.0 nc|ENSG00000105968|Q71UI9-4|H2AZ2;;nc|ENSG00000105968|Q71UI9-3|H2AZ2;;chr7:44834562-44835643|14|15.29|0.2|6.28|-|2|H2AZ2,None|2;;ENSG00000105968|ENST00000308153|H2AZ2;;ENSG00000164032|ENST00000296417|H2AZ1;;ENST00000511319.5_1_4:100869621-100871200:-|nuORF 3.976980129877726 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9636 50.405 89.0 1496700.0 25 0 135470.0 + 29730 QPLQNVSTV 9 148 493.27097235410855 984.5273917750172 2 493.2695190310478 MULTI CID FTMS 0 0 0 9631 887022.3125 1.0 0 0.0 5 Unmodified _QPLQNVSTV_ nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1 46.020951573049366 0.0490941689151868 3 VQPHTV 6 6 42.555 0.0 0.0 4.3224 0.0 0.0 305.1589358197421 0.0 305.1589358197421 0.0 19.303474365146265 0.0 0.0 0 0.2614393726401688 0.0 1.3807196863200843 0.3807196863200844 VQPHTV 4.3224 - 2143 + 1 1.488 101659.1 1.0 4365 5269 9631 HBL1_DMSO_200M_050219_1,9636 HBL1_DMSO_200M_050219_1,9636,QPLQNVSTV True True QPLQNVSTV 50.404655 493.269519031048 16345559.0 9631.0 nc|ENSG00000113282|Q14677-2|CLINT1;;nc|ENSG00000113282|Q14677-3|CLINT1 7.168600718180339 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 9637 50.407 110.0 273960.0 25 0 30730.0 -1 ENFTCGDFDPG 11 61 629.7349044733274 1257.4552560134548 2 629.7350341677666 MULTI CID FTMS 0 0 0 9631 827267.0625 0.3557499465956056 2 -0.1961402893066406 6 Carbamidomethyl (C) _ENFTC(Carbamidomethyl (C))GDFDPG_ ENST00000496961.5_1_1:110040563-110040815:+|nuORF 5.296884461304476 0.8501568894076437 3 [C(Carbamidomethyl (C))Q]NQ{I|L}E 6 -1 25.138 0.0 0.0 1.9991 0.0 0.0 0.0 482.1314180963501 482.1314180963501 10.601519357652604 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 [C(Carbamidomethyl (C))Q]NQ{I|L}E 1.9991 - 136 + 1 1.488 30757.8 1.0 4366 5269 9631 HBL1_DMSO_200M_050219_1,9637 HBL1_DMSO_200M_050219_1,9637,ENFTCGDFDPG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9638 50.41 135.0 1187000.0 25 0 239610.0 + + 17971 KEAACSSGVLLEVK 14 123 358.7131203982678 715.4116878633356 2 358.7126953005791 MULTI CID FTMS 0 0 0 9631 677692.5 0.8875700266956633 -1 0.1094131469726562 7 Unmodified _KRKGGGGG_ nc|ENSG00000134363|P19883-2|FST;ENSG00000134363|ENST00000256759|FST 0.0 0.8243325171867699 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}EVK 6 -1 + 55.142 0.0 0.0 7.7077 7.7077 87.749 0.0 0.0 0.0 26.329628067253168 4.60730838531493 4.60730838531493 4.60730838531493 0 0.3252574989159953 2.0 0.805462187404089 0.2742275032520141 {NN|[MP]|[D{I|L}]|[EV]}{I|L}EVK;{NN|[MP]|[D{I|L}]|[EV]}{I|L}EKV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}V{[QN]|[E{I|L}]|[KN]}K;{[TV]|[{I|L}S]}GV{I|L}EV;{[{M(Oxidation (M))|F}H]|[RQ]}WVK;{[TV]|[{I|L}S]}G{I|L}VEV;{[{M(Oxidation (M))|F}H]|[RQ]}WKV;{[QN]|[E{I|L}]|[KN]}KVEV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}EV 7.7077;7.0637;4.655;4.6338;2.7455;2.2906;1.7684;1.6466;1.5346;1.4074 -;-;-;-;-;-;-;-;-;- 183 + 1 1.488 131483.2 1.0 4367 5269 9631 HBL1_DMSO_200M_050219_1,9638 HBL1_DMSO_200M_050219_1,9638,KRKGGGGG False False KEAACSSGVLLEVK 50.409714 358.712695300579 274514.4375 9631.0 nc|ENSG00000134363|P19883-2|FST;;ENSG00000134363|ENST00000256759|FST 0.5732890466849009 4.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9639 50.413 141.0 971580.0 25 0 79309.0 + 41168 VPCPPLRRV 9 123 346.20753594510234 1035.600778435507 3 346.2073547244072 MULTI CID FTMS 0 0 0 9631 575233.625 0.932806525209956 2 -0.1961402893066406 8 Unmodified _VPCPPLRRV_ ENSG00000171763|ENST00000305560|SPATA5L1;nc|ENSG00000171763|Q9BVQ7-2|AFG2B;nc|ENSG00000171763|Q9BVQ7-3|AFG2B 26.268140514670165 0.1969607489560049 3 VPCV 4 5 41.885 0.0 0.0 4.0446 0.0 0.0 0.0 634.3796569365712 634.3796569365712 30.91637507904749 0.0 0.0 0.0 0 0.25 0.744727494896694 0.0 0.0 VPCV 4.0446 - 61 + 1 1.488 116106.7 1.0 4368 5269 9631 HBL1_DMSO_200M_050219_1,9639 HBL1_DMSO_200M_050219_1,9639,VPCPPLRRV False True VPCPPLRRV 50.412549 346.207354724407 11633902.0 9631.0 nc|ENSG00000171763|Q9BVQ7-3|AFG2B;;nc|ENSG00000171763|Q9BVQ7-2|AFG2B;;ENSG00000171763|ENST00000305560|SPATA5L1 5.839953740437825 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9640 50.415 147.0 451040.0 25 0 55575.0 + 27149 PFPPGLFPV 9 90 485.7716224139696 0 485.7719299197197 PEAK CID FTMS 0 0 0 9631 539355.3125 0.5766245000456371 7 -0.4989738464355469 9 Unmodified _PFPPGLFPV_ ENSG00000139718|ENST00000604567|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B 28.17323086031832 0.1269780855172776 3 PPP 3 6 20.802 0.0 0.0 2.1456 0.0 0.0 147.06851501792863 528.2804049127561 675.3489199306848 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 PPP 2.1456 - 58 + 1 1.488 54612.7 1.0 4369 5269 9631 HBL1_DMSO_200M_050219_1,9640 HBL1_DMSO_200M_050219_1,9640,PFPPGLFPV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9641 50.418 117.0 659160.0 25 0 34389.0 + 30885 RIPEKVFQA 9 115 544.3167628472671 1086.618972761334 2 544.3165161013603 MULTI CID FTMS 0 0 0 9631 512194.8125 0.7783940464106194 -6 0.6190452575683594 10 Unmodified _RIPEKVFQA_ ENSG00000185414|ENST00000338148|MRPL30;ENSG00000241962|ENST00000424491|unknown;nc|ENSG00000185414|Q8TCC3-3|MRPL30 31.26834338654808 0.1333407332142048 3 [R{I|L}][EP]KV{M(Oxidation (M))|F}[QA] 9 0 + 32.669 0.0 0.0 3.0065 3.0065 82.576 0.0 0.0 0.0 10.472479334672496 14.710027747404771 10.472479334672496 32.66882792084552 0 0.7134679910804405 0.7695510786217261 0.4247425010840047 0.0 + + [R{I|L}][EP]KV{M(Oxidation (M))|F}[QA] 3.0065 + + 217 1 1.488 63754.9 1.0 4370 5269 9631 HBL1_DMSO_200M_050219_1,9641 HBL1_DMSO_200M_050219_1,9641,RIPEKVFQA False True RIPEKVFQA 50.417924 544.31651610136 11645329.0 9631.0 ENSG00000241962|ENST00000424491|unknown;;ENSG00000185414|ENST00000338148|MRPL30;;nc|ENSG00000185414|Q8TCC3-3|MRPL30 3.2094921668370566 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9642 50.424 345.0 574910.0 25 0 28982.0 + 24383 MFPEHAVKAY 10 177 398.1987997273793 1191.574569782338 3 398.1988098025322 MULTI CID FTMS 0 0 0 9631 468239.875 0.5692269211558079 -9 0.8595390319824219 11 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 43.77239144664712 0.1177314611616471 3 M{M(Oxidation (M))|F}PEHAVKAY 10 0 + 61.761 0.0 0.0 5.1831 5.1831 85.832 0.0 0.0 0.0 16.53212513775344 9.688105454342804 9.688105454342804 9.688105454342804 0 0.4072330344320659 0.0 0.3054621874040891 0.0 + + M{M(Oxidation (M))|F}PEHAVKAY;M{M(Oxidation (M))|F}PEHAVK{M(Oxidation (M))|F}S;M{M(Oxidation (M))|F}Y[RD]VKAY;M{M(Oxidation (M))|F}Y[RD]VK{M(Oxidation (M))|F}S;M[YV][{M(Oxidation (M))|F}T]AVKAY;M[YV]Y{I|L}[RN]AY;M[YV][{M(Oxidation (M))|F}T]AVK{M(Oxidation (M))|F}S;M[YV]HKVA[MD]V;M[YV]Y{I|L}[RN]{M(Oxidation (M))|F}S;M[YV]HKVA[EC]{I|L} 5.1831;4.3701;3.5189;2.4757;1.6114;0.93325;0.56825;0.33236;0.30967;0.12442 +;-;-;-;-;-;-;-;-;- + 1026 + 1 1.488 157862.6 1.0 4371 5269 9631 HBL1_DMSO_200M_050219_1,9642 HBL1_DMSO_200M_050219_1,9642,MFPEHAVKAY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9643 50.429 258.0 323340.0 25 0 17508.0 + 17897 KQQDHFFQA 9 130 574.777844954877 1147.5411369765538 2 574.7779418826103 MULTI CID FTMS 0 0 0 9631 448545.375 0.2638155366044523 2 -0.1961402893066406 12 Unmodified _KQQDHFFQA_ ENSG00000115956|ENST00000234313|PLEK 43.77239144664712 0.0547478964384323 3 {M(Oxidation (M))|F}AN{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA 7 5 59.187 0.0 0.0 5.1577 0.0 0.0 304.15172011543126 0.0 304.15172011543126 0.0 45.69221977646535 0.0 0.0 0 0.6861818737241735 0.0 0.0 1.0114393726401687 {M(Oxidation (M))|F}AN{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA 5.1577 - 2270 1 1.488 67125.4 1.0 4372 5269 9631 HBL1_DMSO_200M_050219_1,9643 HBL1_DMSO_200M_050219_1,9643,KQQDHFFQA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9644 50.431 117.0 1030000.0 25 0 68115.0 + + 35320 EQIAEFKEA 9 134 532.7675126424554 1063.5204723517106 2 532.7675048708916 MULTI CID FTMS 0 0 0 9631 433768.09375 0.7967535941387097 -7 0.6771507263183594 13 Unmodified _SSTAIEALSW_ ENSG00000160014|ENST00000291295|CALM3;ENST00000556757.5_1_14:90863574-90867886:+|nuORF;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;ENST00000597868.5_1_19:47104691-47111872:+|nuORF;ENSG00000198668|ENST00000356978|CALM1;ENSG00000143933|ENST00000272298|CALM2 30.63653989081413 0.2803493085145199 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}A{M(Oxidation (M))|F}AE{M(Oxidation (M))|F} 8 -1 37.701 0.0 0.0 3.5449 0.0 0.0 0.0 125.07227502994375 125.07227502994375 3.924965767212029 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.805462187404089 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}A{M(Oxidation (M))|F}AE{M(Oxidation (M))|F} 3.5449 - 2135 + 1 1.488 94503.3 1.0 4373 5269 9631 HBL1_DMSO_200M_050219_1,9644 HBL1_DMSO_200M_050219_1,9644,SSTAIEALSW False False EQIAEFKEA 50.431403 532.767504870892 3694105.75 9631.0 ENSG00000160014|ENST00000291295|CALM3;;ENST00000556757.5_1_14:90863574-90867886:+|nuORF;;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;;ENST00000597868.5_1_19:47104691-47111872:+|nuORF;;ENSG00000198668|ENST00000356978|CALM1;;ENSG00000143933|ENST00000272298|CALM2 4.845288117726644 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9645 50.436 256.0 517720.0 25 0 40972.0 + 11237 GEQLHCGHDWY 11 134 448.853143925873 1343.5376023778192 3 448.8531982302666 MULTI CID FTMS 0 0 0 9631 382971.09375 1.0 0 0.0 14 Unmodified _GEQLHCGHDWY_ REV__nc|ENSG00000108846|O15438-3|ABCC3 10.799506525563784 0.8105043987015127 3 {[QS]|[NT]}CYRS 6 -1 25.857 0.0 0.0 1.9246 0.0 0.0 0.0 616.2287817378285 616.2287817378285 6.149401675463487 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.4581706663129559 0.9802046884880936 {[QS]|[NT]}CYRS 1.9246 - 1021 1 1.488 107044.6 1.0 4374 5269 9631 HBL1_DMSO_200M_050219_1,9645 HBL1_DMSO_200M_050219_1,9645,GEQLHCGHDWY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9646 50.439 161.0 553780.0 25 0 76582.0 + 4101 DANTEMQQI 9 121 525.2318238894957 1048.4490948457913 2 525.2321655154228 MULTI CID FTMS 0 0 0 9631 384329.9375 0.9797436164410058 2 -0.1961402893066406 15 Unmodified _DANTEMQQI_ ENSG00000134697|ENST00000373062|GNL2 43.85829265575387 0.0542763391141878 3 Q{I|L} 2 7 17.541 0.0 0.0 1.673 0.0 0.0 789.2959404041882 0.0 789.2959404041882 0.0 5.322019340406747 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + Q{I|L} 1.673 + + 247 + 1 1.488 71802.1 1.0 4375 5269 9631 HBL1_DMSO_200M_050219_1,9646 HBL1_DMSO_200M_050219_1,9646,DANTEMQQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9647 50.445 288.0 314290.0 25 0 63176.0 + 38891 TVLDENKNTAL 11 115 609.3221509113346 1216.629748889469 2 609.3224365115166 MULTI CID FTMS 0 0 0 9631 348598.34375 1.0 0 0.0 16 Unmodified _TVLDENKNTAL_ ENSG00000139645|ENST00000267116|ANKRD52 69.33821966488729 0.0343223916712224 3 {[TV]|[{I|L}S]}{I|L}D[NG]NTA{I|L}{[TV]|[{I|L}S]} 12 4 + 79.651 0.0 0.0 6.5468 6.5468 88.63 0.0 0.0 0.0 15.47666023272842 19.361442680279183 15.47666023272842 9.098233696509112 0 1.3494850021680094 2.0 1.2769763493273798 1.086696871556164 {[TV]|[{I|L}S]}{I|L}D[NG]NTA{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}D[NG]GGTA{I|L}{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}[RN]TNTA{I|L}{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}[RN]TGGTA{I|L}{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}[RN]TNTV{[RE]|[WV]};[{I|L}V]TD[NG]NTA{I|L}{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}[NG]NTA{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}D{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L};{[TV]|[{I|L}S]}{I|L}D{M(Oxidation (M))|F}{[NV]|[RG]}[EP]A{I|L};{[QN]|[E{I|L}]|[KN]}QQTNTA{I|L}{[TV]|[{I|L}S]} 6.5468;5.799;5.1043;4.354;4.1181;4.1031;4.0635;4.0469;3.7994;3.7943 -;-;-;-;-;-;-;-;-;- 1027 1 1.488 71510.1 1.0 4376 5269 9631 HBL1_DMSO_200M_050219_1,9647 HBL1_DMSO_200M_050219_1,9647,TVLDENKNTAL True True TVLDENKNTAL 50.444624 609.322436511517 2008582.375 9631.0 ENSG00000139645|ENST00000267116|ANKRD52 5.57608699798584 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9648 50.451 362.0 611670.0 25 0 65082.0 22499 LPVRGVEV 8 144 434.7662036322309 867.5178543312618 2 434.7660400271416 MULTI CID FTMS 0 0 0 9631 338348.625 0.3018872490931245 7 -0.4989738464355469 17 Unmodified _LPVRGVEV_ ENSG00000113621|ENST00000358387|TXNDC15;nc|ENSG00000113621|Q96J42-2|TXNDC15 26.88365393820708 0.4786498634179528 3 {I|L}PPS 4 6 52.251 0.0 0.0 6.023 0.0 0.0 0.0 470.2739657037719 470.2739657037719 38.75569708000178 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PPS 6.023 - 377 + 1 1.488 172407.4 1.0 4377 5269 9631 HBL1_DMSO_200M_050219_1,9648 HBL1_DMSO_200M_050219_1,9648,LPVRGVEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9649 50.461 484.0 744680.0 25 0 70950.0 + 29697 QPFRAMREV 9 245 378.5339841104021 1132.5801229314063 3 378.5338928103447 MULTI CID FTMS 0 0 0 9631 317114.9375 1.0 0 0.0 18 Unmodified _QPFRAMREV_ ENSG00000156232|ENST00000286760|WHAMM 37.07464296494664 0.0915153923251136 3 QP{M(Oxidation (M))|F}RAMREV 9 0 + 49.705 0.0 0.0 4.3887 4.3887 77.803 0.0 0.0 0.0 8.532371286460226 1.4639691172284657 1.4639691172284657 4.771212547196626 0 0.9247425010840048 0.0 0.1344005005252609 0.6694451763165201 + + QP{M(Oxidation (M))|F}RAMREV;QP{M(Oxidation (M))|F}RVCREV;QP{M(Oxidation (M))|F}VRCREV;QP{M(Oxidation (M))|F}RAV[WM]V;QP{M(Oxidation (M))|F}VQV[WM]V;QP{M(Oxidation (M))|F}VGAV[WM]V;QPV{M(Oxidation (M))|F}GAV[WM]V;QP{M(Oxidation (M))|F}RAMRD{I|L};QP{M(Oxidation (M))|F}RVA[WM]V;QP{M(Oxidation (M))|F}VRA[WM]V 4.3887;3.9674;3.9674;3.8307;3.8307;3.8164;3.5506;3.5259;3.4095;3.4095 +;-;-;-;-;-;-;-;-;- + 4581 + 1 1.488 281223.9 1.0 4378 5269 9631 HBL1_DMSO_200M_050219_1,9649 HBL1_DMSO_200M_050219_1,9649,QPFRAMREV True True QPFRAMREV 50.460855 378.533892810345 2288889.25 9631.0 ENSG00000156232|ENST00000286760|WHAMM 5.623993873596191 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9650 50.475 800.0 457950.0 25 0 64154.0 -1 0 134 966.4326234561798 1930.85069397916 2 966.4321166872978 MULTI CID FTMS 0 0 0 9631 275600.28125 0.1450146560154317 7 -0.4989738464355469 19 3 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L}PE 8 -1 23.561 0.0 0.0 1.2202 0.0 0.0 0.0 1075.3903745063274 1075.3903745063274 -0.0900404334463651 0.0 -0.0900404334463651 0.0 0 0.0 0.4202164033831898 0.3252574989159953 1.2198565171985376 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L}PE 1.2202 - 1845 1 1.488 234709.9 0.8100000023841858 4379 5269 9631 HBL1_DMSO_200M_050219_1,9650 HBL1_DMSO_200M_050219_1,9650, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9651 50.489 800.0 191660.0 25 0 19416.0 + 34508 SMYGVDLHKA 10 197 560.7760309506875 1119.537508968175 2 560.7763549685478 MULTI CID FTMS 0 0 0 9631 237473.015625 1.0 0 0.0 20 Unmodified _SMYGVDLHKA_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 21.59015148037692 0.4836074274810599 3 {[MS]|[{M(Oxidation (M))|F}A]}YGVD{I|L}HAK 10 2 + 49.739 0.0 0.0 4.4428 4.4428 83.641 0.0 0.0 0.0 34.33311867963284 7.249690355385717 7.249690355385717 10.402584465694751 0 0.3807196863200844 1.6989700043360187 0.0 0.1747425010840047 {[MS]|[{M(Oxidation (M))|F}A]}YGVD{I|L}HAK;{[MS]|[{M(Oxidation (M))|F}A]}YGVD{I|L}K[HA];{I|L}{I|L}G[PS]DRYCP;[{I|L}A]V[PS]DRYCP;[HK]{I|L}[R{M(Oxidation (M))|F}]GYCP;[HK]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}RYCP;{[MS]|[{M(Oxidation (M))|F}A]}[VS]{[HG]|PP}R{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}E]{[HG]|PP}RRRY;[HK]{I|L}DR{[HG]|PP}EE;[H{I|L}]K[R{M(Oxidation (M))|F}]GYCP 4.4428;3.5136;1.6835;1.2133;1.1;1.1;0.82889;0.68105;0.67623;0.59597 -;-;-;-;-;-;-;-;-;- 827 + 1 1.488 115985.5 0.8999999761581421 4380 5269 9631 HBL1_DMSO_200M_050219_1,9651 HBL1_DMSO_200M_050219_1,9651,SMYGVDLHKA False True SMYGVDLHKA 50.488551 560.776354968548 1881916.875 9631.0 nc|ENSG00000159023|P11171-5|EPB41;;nc|ENSG00000159023|P11171-2|EPB41;;ENSG00000159023|ENST00000343067|EPB41;;nc|ENSG00000159023|P11171-3|EPB41;;nc|ENSG00000159023|P11171-4|EPB41;;nc|ENSG00000159023|P11171-6|EPB41;;nc|ENSG00000159023|P11171-7|EPB41 6.661486784617106 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9653 50.494 47.0 746000.0 25 0 105140.0 + 29612 QLVTIKGKE 9 74 508.31081434427887 1014.6070757553578 2 508.3109924197197 MULTI CID FTMS 0 0 0 9652 603190.75 0.0790172510980645 3 -0.1738014221191406 1 Unmodified _QLVTIKGKE_ REV__ENSG00000127481|ENST00000375254|UBR4;REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF;REV__nc|ENSG00000127481|Q5T4S7-2|UBR4;REV__nc|ENSG00000127481|Q5T4S7-3|UBR4;REV__nc|ENSG00000127481|Q5T4S7-4|UBR4;REV__nc|ENSG00000127481|Q5T4S7-5|UBR4 16.149105407346934 0.3995459350917656 3 [Q{I|L}]VT 4 -1 27.747 0.0 0.0 2.7348 0.0 0.0 0.0 570.3254488580686 570.3254488580686 16.63811573052314 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 [Q{I|L}]VT 2.7348 + + 88 + 1 1.501 32848.8 1.0 4381 5270 9652 HBL1_DMSO_200M_050219_1,9653 HBL1_DMSO_200M_050219_1,9653,QLVTIKGKE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9654 50.495 33.0 1472900.0 25 0 221010.0 + 5758 DPPDGIKV 8 77 420.7266170421713 839.4386811511426 2 420.7265807986259 MULTI CID FTMS 0 0 0 9652 1429893.0 0.5430310750000071 3 -0.1738014221191406 2 Unmodified _DPPDGIKV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 36.12702656103203 0.299085846329477 3 DPPD{[VA]|[{I|L}G]}KV 8 0 + 60.157 0.0 0.0 7.1663 7.1663 95.569 0.0 0.0 0.0 46.57312836760731 7.19273760456403 7.19273760456403 60.15662222408956 0 0.7302046884880937 2.0 0.0 0.25 + + DPPD{[VA]|[{I|L}G]}KV 7.1663 + + 84 + 1 1.501 47803.4 1.0 4382 5270 9652 HBL1_DMSO_200M_050219_1,9654 HBL1_DMSO_200M_050219_1,9654,DPPDGIKV False True DPPDGIKV 50.49473 420.726580798626 101213520.0 9652.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 5.45328934987386 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9655 50.496 14.0 3082900.0 25 0 287340.0 + 26058 NMVAKVDEV 9 71 502.75812669504944 1003.5017004568988 2 502.7577697634697 MULTI CID FTMS 0 0 0 9652 3658850.75 0.680538085973192 -2 0.2039222717285156 3 Unmodified _NMVAKVDEV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 29.081581746732265 0.1611639662936252 3 [MN]V{M(Oxidation (M))|F}DVVAG 9 5 54.051 0.0 0.0 5.3863 0.0 0.0 0.0 68.05130182437733 68.05130182437733 40.07183756753818 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.4247425010840047 0.0 [MN]V{M(Oxidation (M))|F}DVVAG 5.3863 - 151 + 1 1.501 39798.1 1.0 4383 5270 9652 HBL1_DMSO_200M_050219_1,9655 HBL1_DMSO_200M_050219_1,9655,NMVAKVDEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9656 50.497 62.0 822400.0 25 0 76809.0 -1 FTNFLYDMLFY 11 50 745.3384123200148 1488.6622717068294 2 745.3395263552666 MULTI CID FTMS 0 0 0 9652 923834.625 0.930556441293909 1 -0.1016311645507812 4 Oxidation (M) _FTNFLYDM(Oxidation (M))LFY_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 5.731851221503515 0.8481046878870278 3 SEAQQNA{M(Oxidation (M))|F}Y 9 -1 61.292 0.0 0.0 4.1172 0.0 0.0 432.2050038068375 0.0 432.2050038068375 0.0 45.80706579873059 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.8494850021680094 SEAQQNA{M(Oxidation (M))|F}Y 4.1172 - 301 1 1.501 43395.0 1.0 4384 5270 9652 HBL1_DMSO_200M_050219_1,9656 HBL1_DMSO_200M_050219_1,9656,FTNFLYDMLFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9657 50.499 61.0 705390.0 25 0 76137.0 + 42715 VVAPDNLKQV 10 73 541.8139233977278 1081.6132938622554 2 541.8138915896416 MULTI CID FTMS 0 0 0 9652 734458.6875 0.4726985922427535 -3 0.2767105102539062 5 Unmodified _VVAPDNLKQV_ ENSG00000070367|ENST00000621441|EXOC5;ENST00000510543.1_1_4:63683420-63684509:+|nuORF;ENST00000554011.5_1_14:57675329-57698504:-|nuORF 13.042465956692816 0.6287021003332052 3 VVAV 4 6 40.802 0.0 0.0 3.7723 0.0 0.0 0.0 710.3452852838499 710.3452852838499 17.12643677897418 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 VVAV 3.7723 - 161 + 1 1.501 39340.3 1.0 4385 5270 9652 HBL1_DMSO_200M_050219_1,9657 HBL1_DMSO_200M_050219_1,9657,VVAPDNLKQV False True VVAPDNLKQV 50.498971 541.813891589642 9559898.0 9652.0 ENST00000510543.1_1_4:63683420-63684509:+|nuORF;;ENST00000554011.5_1_14:57675329-57698504:-|nuORF;;ENSG00000070367|ENST00000621441|EXOC5 6.2809739112854 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9658 50.501 68.0 767350.0 25 0 66582.0 + 24971 MPPPPPQGV 9 81 460.2385793050109 918.462605676822 2 460.2384826540947 MULTI CID FTMS 0 0 0 9652 730239.625 0.0242577061374579 47 -4.273521423339844 6 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 3 V 1 8 13.979 0.0 0.0 1.522 0.0 0.0 801.3834029564102 0.0 801.3834029564102 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.522 + + 95 + 1 1.501 43500.8 1.0 4386 5270 9652 HBL1_DMSO_200M_050219_1,9658 HBL1_DMSO_200M_050219_1,9658,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9659 50.502 82.0 481120.0 25 0 34976.0 + 25638 NFQTAKEAL 9 79 511.2693785534356 1020.5242041736713 2 511.2697631716728 MULTI CID FTMS 0 0 0 9652 388558.5 0.6907902390567733 -3 0.2767105102539062 7 Unmodified _NFQTAKEAL_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 43.77239144664712 0.0547478964384323 3 TQSR 4 8 25.763 0.0 0.0 2.5245 0.0 0.0 530.305955955275 0.0 530.305955955275 0.0 12.99853403804061 0.0 0.0 0 0.9731975075880328 0.0 0.5 0.3494850021680094 TQSR 2.5245 - 149 1 1.501 34649.4 1.0 4387 5270 9652 HBL1_DMSO_200M_050219_1,9659 HBL1_DMSO_200M_050219_1,9659,NFQTAKEAL True True NFQTAKEAL 50.502453 511.269763171673 3871135.25 9652.0 nc|ENSG00000129003|Q709C8-3|VPS13C;;ENSG00000129003|ENST00000644861|VPS13C;;nc|ENSG00000129003|Q709C8-4|VPS13C;;nc|ENSG00000129003|Q709C8-2|VPS13C 7.098959763844808 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9660 50.506 166.0 514480.0 25 0 32597.0 + 32111 RVLTVINQT 9 124 522.3144769444892 1042.6144009557784 2 522.3141967654228 MULTI CID FTMS 0 0 0 9652 347409.90625 0.7668663818546023 -2 0.2039222717285156 8 Unmodified _RVLTVINQT_ ENSG00000136942|ENST00000348462|RPL35;ENST00000487431.1_1_9:127620199-127623861:-|nuORF 40.23920728925047 0.0741434193262949 3 {[TV]|[{I|L}S]}[R{I|L}]V{I|L}NQT 9 2 + 47.413 0.0 0.0 4.5475 4.5475 82.862 0.0 0.0 0.0 2.164537177296495 29.72239077183435 2.164537177296495 9.208187539523747 0 0.5189301784845296 0.9208187539523752 0.6694451763165201 0.0 {[TV]|[{I|L}S]}[R{I|L}]V{I|L}NQT;{[TV]|[{I|L}S]}[R{I|L}]V{I|L}GGQT;{[TV]|[{I|L}S]}[R{I|L}]V{I|L}N[AG]T 4.5475;3.6643;3.6643 -;-;- 781 1 1.501 68937.7 1.0 4388 5270 9652 HBL1_DMSO_200M_050219_1,9660 HBL1_DMSO_200M_050219_1,9660,RVLTVINQT True True RVLTVINQT 50.505723 522.314196765423 3095300.5 9652.0 ENST00000487431.1_1_9:127620199-127623861:-|nuORF;;ENSG00000136942|ENST00000348462|RPL35 3.647716045379639 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9661 50.51 236.0 459760.0 25 0 27393.0 + 24286 MARRYETLV 9 113 380.20564501908257 1137.5951056574477 3 380.2052490115166 MULTI CID FTMS 0 0 0 9652 318056.40625 1.0 0 0.0 9 Unmodified _MARRYETLV_ ENSG00000135698|ENST00000258169|MPHOSPH6 18.1463463914782 0.3454829746528889 3 T{I|L}V 3 6 28.984 0.0 0.0 2.5479 0.0 0.0 806.3850562075831 0.0 806.3850562075831 0.0 19.5205343810445 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 + T{I|L}V 2.5479 + + 69 1 1.501 93492.9 1.0 4389 5270 9652 HBL1_DMSO_200M_050219_1,9661 HBL1_DMSO_200M_050219_1,9661,MARRYETLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9662 50.514 224.0 951110.0 25 0 90150.0 + 23466 LTGTFIVIDI 10 168 546.3186031313584 1090.6226533295169 2 546.3186523318291 MULTI CID FTMS 0 0 0 9652 246271.78125 0.0144908117990965 -5 0.4731369018554687 10 Unmodified _LTGTFIVIDI_ ENST00000511359.1_1_5:23303923-23304922:-|nuORF 52.268347100219714 0.0668375294751462 3 {I|L}TSSAVTTAK{I|L} 11 8 + 102.45 0.0 0.0 9.3934 9.3934 86.984 0.0 0.0 0.0 36.57577319177793 2.689036680166936 2.689036680166936 2.689036680166936 0 0.6989700043360187 2.0 0.6989700043360187 0.4247425010840047 {I|L}TSSAVTTAK{I|L};{I|L}TSSAVTTA{I|L}K;[{I|L}T]GTE[KT]KT{I|L};[{I|L}T]E{[SA]|[TG]}[KT]KT{I|L};[{I|L}T]E[TA]KSKT{I|L};[{I|L}T][TA]D[KT]KT{I|L};[{I|L}T][TA]EKSKT{I|L};[{I|L}T]GT{I|L}TGSKT{I|L};[{I|L}T]GTA{[CA]|SS}{I|L}KT{I|L};[{I|L}T]GTA{[WT]|[RM]}KT{I|L} 9.3934;9.1468;4.3257;3.9665;3.8652;3.78;3.6787;3.632;3.462;3.3357 -;-;-;-;-;-;-;-;-;- 6064 + 1 1.501 161728.5 1.0 4390 5270 9652 HBL1_DMSO_200M_050219_1,9662 HBL1_DMSO_200M_050219_1,9662,LTGTFIVIDI True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9663 50.522 428.0 331400.0 25 0 30675.0 + 28662 PVMESKTPSL 10 180 363.5251643455127 1087.553663636738 3 364.1893493533134 MULTI CID FTMS 0 0 0 9652 144945.671875 0.2340831664024505 -5 0.4731369018554687 11 Unmodified _PVMESKTPSL_ ENST00000265077.7_1_5:82877612-82877705:+|nuORF 10.073929032068715 0.6785112666868882 3 {[DA]|[EG]}[RH][RH]GT 8 9 24.939 0.0 0.0 2.2931 0.0 0.0 0.0 154.0715994921991 154.0715994921991 11.444021793654857 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.0 {[DA]|[EG]}[RH][RH]GT 2.2931 - 207 1 1.501 117649.9 1.0 4391 5270 9652 HBL1_DMSO_200M_050219_1,9663 HBL1_DMSO_200M_050219_1,9663,PVMESKTPSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9664 50.536 800.0 569980.0 25 0 32971.0 + 27290 PHIHKSLI 8 255 472.7873669526792 943.5601809721584 2 472.7873412966728 MULTI CID FTMS 0 0 0 9652 136770.71875 0.637313431857801 -3 0.2767105102539062 12 Unmodified _PHIHKSLI_ ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-3|H2AZ2;nc|ENSG00000105968|Q71UI9-4|H2AZ2 103.74828524460852 0.0781359809994014 3 PH{I|L}HKS{I|L}{I|L} 8 0 + 70.395 0.0 0.0 7.4606 7.4606 89.81 0.0 0.0 0.0 7.1072524555073215 7.1072524555073215 7.1072524555073215 7.1072524555073215 0 2.492992819099939 1.154901959985743 0.9124379954164592 0.0 + + PH{I|L}HKS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}HKS{I|L}{I|L};PH{I|L}HK{I|L}S{I|L};[H{I|L}]PHKS{I|L}{I|L};P{I|L}HHKS{I|L}{I|L};PH{I|L}HK{I|L}TV;AA[WR]KS{I|L}{I|L};{I|L}PHHKS{I|L}{I|L};[H{I|L}]HPKS{I|L}{I|L};[{I|L}P]HHKS{I|L}{I|L} 7.4606;6.7073;6.4697;6.3606;5.9865;5.8162;5.7447;5.625;5.409;5.075 +;+;-;-;-;-;-;-;-;- + 1965 + 1 1.501 342919.3 0.7599999904632568 4392 5270 9652 HBL1_DMSO_200M_050219_1,9664 HBL1_DMSO_200M_050219_1,9664,PHIHKSLI True True PHIHKSLI 50.535809 472.787341296673 1766080.75 9652.0 nc|ENSG00000105968|Q71UI9-4|H2AZ2;;nc|ENSG00000105968|Q71UI9-3|H2AZ2;;chr7:44834562-44835643|14|15.29|0.2|6.28|-|2|H2AZ2,None|2;;ENSG00000105968|ENST00000308153|H2AZ2;;ENSG00000164032|ENST00000296417|H2AZ1;;ENST00000511319.5_1_4:100869621-100871200:-|nuORF 2.3618273735046387 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9665 50.55 800.0 314900.0 25 0 24631.0 + 6020 DSASLPKV 8 240 408.72694084773 815.4393287622601 2 408.7266113162041 MULTI CID FTMS 0 0 0 9652 134670.71875 0.6976566258238454 -5 0.4731369018554687 13 Unmodified _DSASLPKV_ ENSG00000198912|ENST00000361605|C1orf174;ENST00000486765.5_1_1:3806526-3811957:-|nuORF 48.345845343767074 0.1470278396477103 3 {[DS]|[MA]|[CV]|TT}AS{I|L}PKV 8 0 + 40.655 0.0 0.0 4.9856 4.9856 82.039 0.0 0.0 0.0 6.989700043360188 7.105660875644418 6.989700043360188 7.105660875644418 0 0.3494850021680094 0.0 0.805462187404089 0.0 + + {[DS]|[MA]|[CV]|TT}AS{I|L}PKV;{[DS]|[MA]|[CV]|TT}AS{I|L}PVK;{[DS]|[MA]|[CV]|TT}AS{I|L}VPK;[KP]{I|L}[VS]A{[DS]|[MA]|[CV]|TT};[KP]V{[TV]|[{I|L}S]}A{[DS]|[MA]|[CV]|TT} 4.9856;4.1142;3.5755;0.82839;0.70955 +;-;-;-;- + 180 + 1 1.501 191455.7 0.6600000262260437 4393 5270 9652 HBL1_DMSO_200M_050219_1,9665 HBL1_DMSO_200M_050219_1,9665,DSASLPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9666 50.563 800.0 320170.0 25 0 64583.0 + 24287 MARRYETLV 9 175 569.8056773901127 1137.5968018470253 2 569.8054077029228 MULTI CID FTMS 0 0 0 9652 129333.375 1.0 0 0.0 14 Unmodified _MARRYETLV_ ENSG00000135698|ENST00000258169|MPHOSPH6 29.081581746732265 0.1611639662936252 3 V{I|L}[YT]W[MN]{I|L}V 9 7 + 40.939 0.0 0.0 3.5988 3.5988 77.627 0.0 0.0 0.0 16.477632129058122 10.43477518001658 10.43477518001658 6.805234507957877 0 1.0365754470559565 0.744727494896694 0.805462187404089 0.0 V{I|L}[YT]W[MN]{I|L}V;V{I|L}{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}][MN]{I|L}V;V{I|L}[YT]W[MN]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HA][WR]E{I|L}V;[VG][YR][R{M(Oxidation (M))|F}]E{I|L}V;V{I|L}{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}][MN]V{I|L};[VG][YR]W[{M(Oxidation (M))|F}V]{I|L}V;[QP][NP][WR]E{I|L}V;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[R{M(Oxidation (M))|F}]E{I|L}V;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W[{M(Oxidation (M))|F}V]{I|L}V 3.5988;3.0006;2.6815;2.0996;2.087;2.0833;1.9772;1.9616;1.9515;1.8417 -;-;-;-;-;-;-;-;-;- 914 + 1 1.501 194850.3 0.8299999833106995 4394 5270 9652 HBL1_DMSO_200M_050219_1,9666 HBL1_DMSO_200M_050219_1,9666,MARRYETLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9667 50.569 313.0 576120.0 25 0 110590.0 + 31923 RVADRLYGV 9 164 524.7987910401522 1047.5830291471043 2 524.7977172732353 MULTI CID FTMS 0 0 0 9652 114007.0703125 0.7843209707605947 -1 0.0945091247558593 15 Unmodified _RVADRLYGV_ ENSG00000114520|ENST00000251775|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;ENST00000473417.5_1_3:125188296-125239016:-|nuORF;nc|ENSG00000114520|O95219-2|SNX4 27.628801355627647 0.1796483985696185 3 VGVW[R{I|L}]YGV 9 4 + 44.974 0.0 0.0 4.2932 4.2932 70.725 0.0 0.0 0.0 28.60424749683702 0.3954539343745722 0.3954539343745722 0.4575749056067479 0 0.5866968715561641 1.2218487496163564 0.0 0.4247425010840047 VGVW[R{I|L}]YGV;VGVAD[R{I|L}]YGV;VGPT{I|L}RSYGV;VGPTS[R{I|L}]YGV;VGPT{I|L}RTT{[CT]|[{M(Oxidation (M))|F}G]};VGVAQQKYGV;VGPT{I|L}RTHAP;VGVWV[{I|L}A]T{[CT]|[{M(Oxidation (M))|F}G]};VRW[R{I|L}]YGV;VRAD[R{I|L}]YGV 4.2932;4.2495;4.0882;4.0175;3.436;3.3167;3.26;2.997;2.9639;2.915 -;-;-;-;-;-;-;-;-;- 1411 + 1 1.501 141184.1 1.0 4395 5270 9652 HBL1_DMSO_200M_050219_1,9667 HBL1_DMSO_200M_050219_1,9667,RVADRLYGV False True RVADRLYGV 50.569171 524.797717273235 1264852.75 9652.0 ENST00000473417.5_1_3:125188296-125239016:-|nuORF;;ENSG00000114520|ENST00000251775|SNX4;;nc|ENSG00000114520|O95219-2|SNX4;;ENST00000471751.5_1_3:125166625-125239024:-|nuORF 7.10655943552653 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9668 50.584 800.0 70145.0 25 0 13539.0 -1 MDSQENYGSSM 11 85 640.7260619997978 0 640.7260619997978 PEAK CID FTMS 0 0 0 -1 0 16 2 Oxidation (M) _M(Oxidation (M))DSQENYGSSM(Oxidation (M))_ ENSG00000124151|ENST00000371998|NCOA3;nc|ENSG00000124151|Q9Y6Q9-2|NCOA3;nc|ENSG00000124151|Q9Y6Q9-3|NCOA3;nc|ENSG00000124151|Q9Y6Q9-5|NCOA3 1.1933415558491238 0.4761840153648598 3 {I|L}T 2 -1 4.7147 0.0 0.0 0.3685 0.0 0.0 824.1689991443237 238.12006555728752 1062.289064701611 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 {I|L}T 0.3685 - 16 + 1 1.501 51919.8 0.7200000286102295 4396 5270 9652 HBL1_DMSO_200M_050219_1,9668 HBL1_DMSO_200M_050219_1,9668,MDSQENYGSSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9669 50.587 142.0 379400.0 25 0 68875.0 + 16903 KIIETDFEKA 10 83 597.3239002206765 1192.6332475081529 2 597.3242675662041 MULTI CID FTMS 0 0 0 9652 108399.2734375 0.2367551246381983 -3 0.2767105102539062 17 Unmodified _KIIETDFEKA_ ENSG00000141873|ENST00000269740|SLC39A3;nc|ENSG00000141873|Q9BRY0-2|SLC39A3 46.4752305370441 0.1008384395814411 3 K{I|L}{I|L}{[QN]|[E{I|L}]|[KN]}C{M(Oxidation (M))|F}E[KA] 10 2 + 74.645 0.0 0.0 6.2588 6.2588 93.133 0.0 0.0 0.0 62.1705986945735 10.157242179326984 10.157242179326984 74.64484880297397 0 2.555462187404089 0.0 0.3807196863200844 0.2887254899964357 K{I|L}{I|L}{[QN]|[E{I|L}]|[KN]}C{M(Oxidation (M))|F}E[KA] 6.2588 - 92 + 1 1.501 48659.8 1.0 4397 5270 9652 HBL1_DMSO_200M_050219_1,9669 HBL1_DMSO_200M_050219_1,9669,KIIETDFEKA True True KIIETDFEKA 50.587354 597.324267566204 2475017.75 9652.0 ENSG00000141873|ENST00000269740|SLC39A3;;nc|ENSG00000141873|Q9BRY0-2|SLC39A3 6.058782577514648 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9670 50.59 139.0 280230.0 25 0 26198.0 + 35791 SVIQTVNHV 9 81 498.7774231230183 995.5402933128364 2 498.7776061892509 MULTI CID FTMS 0 0 0 9652 107197.3046875 1.0 0 0.0 18 Unmodified _SVIQTVNHV_ ENSG00000070444|ENST00000174618|MNT 29.081581746732265 0.1611639662936252 3 [VS]{I|L}Q{[TV]|[{I|L}S]}NHV 9 0 + 53.879 0.0 0.0 5.412 5.412 85.797 0.0 0.0 0.0 48.39448436569874 11.082268588648247 11.082268588648247 9.208187539523747 0 0.3807196863200844 1.6989700043360187 0.0 0.5 + + [VS]{I|L}Q{[TV]|[{I|L}S]}NHV;[VS]{I|L}Q{[TV]|[{I|L}S]}GGHV;[VS]{I|L}[AG]{[TV]|[{I|L}S]}NHV;[VS]{I|L}{[VA]|[{I|L}G]}{[SA]|[TG]}NHV;[PA]DV[VS]Q{I|L}[PA];[PA]DV[WK]{I|L}[PA];{NN|[MP]|[D{I|L}]|[EV]}[PG][VS]Q{I|L}[PA];[PA]D[{I|L}T][QA]{I|L}[PA];[PA]DV[VS][AG]{I|L}[PA];{NN|[MP]|[D{I|L}]|[EV]}[PG][WK]{I|L}[PA] 5.412;4.4871;4.4871;3.4826;1.8469;1.1908;1.0226;0.76944;0.42413;0.36641 +;-;-;-;-;-;-;-;-;- + 115 + 1 1.501 34135.0 1.0 4398 5270 9652 HBL1_DMSO_200M_050219_1,9670 HBL1_DMSO_200M_050219_1,9670,SVIQTVNHV False True SVIQTVNHV 50.59016 498.777606189251 681440.625 9652.0 ENSG00000070444|ENST00000174618|MNT 6.263954957326253 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9672 50.595 31.0 1518100.0 25 0 279970.0 + 4499 DAYIPRTGV 9 59 496.2640223751811 990.5134918171624 2 496.2640869021416 MULTI CID FTMS 0 0 0 9671 985899.75 0.2727819994269889 2 -0.0721702575683593 1 Unmodified _DAYIPRTGV_ ENSG00000164074|ENST00000645843|ABHD18;ENST00000473040.6_1_4:128905516-128956965:+|nuORF;nc|ENSG00000164074|Q0P651-2|ABHD18;nc|ENSG00000164074|Q0P651-3|ABHD18;nc|ENSG00000164074|Q0P651-4|ABHD18;nc|ENSG00000164074|Q0P651|ABHD18 20.41453444215458 0.284085796332423 3 {[DA]|[EG]}Y{I|L}V 5 4 48.456 0.0 0.0 4.892 0.0 0.0 0.0 426.2088106744751 426.2088106744751 41.46591250700361 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[DA]|[EG]}Y{I|L}V 4.892 - 22 + 1 1.531 40909.9 1.0 4399 5271 9671 HBL1_DMSO_200M_050219_1,9672 HBL1_DMSO_200M_050219_1,9672,DAYIPRTGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9673 50.597 118.0 363580.0 25 0 29938.0 -1 PQPLAMASV 9 93 465.2414669011508 928.4683808691016 2 465.2415038943291 MULTI CID FTMS 0 0 0 9671 316190.40625 0.2615800187587188 2 -0.0721702575683593 2 Oxidation (M) _PQPLAM(Oxidation (M))ASV_ ENSG00000164093|ENST00000644743|PITX2 21.74664581756881 0.2544899275067181 3 [VP]TM[QP]ASV 9 -1 + 42.029 0.0 0.0 4.5267 4.5267 85.768 0.0 0.0 0.0 12.286881741466615 24.28121393504803 12.286881741466615 20.93858646850314 0 0.8182503180159344 1.154901959985743 0.7614393726401688 0.0 [VP]TM[QP]ASV;{[SA]|[TG]}[RN][QP]ASV;[VP]T[PA]{[MG]|[TS]}ASV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]{[SA]|[TG]}SV;[VP]T[PA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SV 4.5267;2.2715;2.1522;1.8749;1.4486 -;-;-;-;- 167 1 1.531 41359.2 1.0 4400 5271 9671 HBL1_DMSO_200M_050219_1,9673 HBL1_DMSO_200M_050219_1,9673,PQPLAMASV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9674 50.6 113.0 822370.0 25 0 61923.0 + 32416 SAAHAIVSV 9 97 427.7399298212296 853.4653067092593 2 427.7401611208916 MULTI CID FTMS 0 0 0 9671 419866.0625 0.7951233213048349 -2 0.1961402893066406 3 Unmodified _SAAHAIVSV_ ENSG00000116001|ENST00000433529|TIA1;ENSG00000151923|ENST00000436547|TIAL1;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1;nc|ENSG00000151923|Q01085-2|TIAL1 20.453626601364224 0.2830276176381075 3 [VS][HN]{I|L}VSV 8 3 + 30.902 0.0 0.0 3.6208 3.6208 72.572 0.0 0.0 0.0 2.3138569009001486 16.923035116746803 2.3138569009001486 2.754758911915932 0 0.6677353201839438 1.3010299956639813 0.0 0.0 [VS][HN]{I|L}VSV;[HA]ASA{I|L}VSV;[HA][QT]{I|L}VSV;[HA][WR]VSV 3.6208;3.298;1.8664;1.1154 -;-;-;- 64 1 1.531 78049.8 1.0 4401 5271 9671 HBL1_DMSO_200M_050219_1,9674 HBL1_DMSO_200M_050219_1,9674,SAAHAIVSV False True SAAHAIVSV 50.5998 427.740161120892 3688282.0 9671.0 nc|ENSG00000151923|Q01085-2|TIAL1;;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;;ENSG00000151923|ENST00000436547|TIAL1;;nc|ENSG00000116001|P31483-2|TIA1;;ENSG00000116001|ENST00000433529|TIA1;;ENST00000482876.5_1_2:70442329-70444102:-|nuORF 5.996804555257161 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9675 50.603 147.0 513760.0 25 0 66155.0 + 26818 PAPPPPQPL 9 102 457.2606336030221 912.5067142728444 2 457.2604247927666 MULTI CID FTMS 0 0 0 -1 0 4 Unmodified _PAPPPPQPL_ ENST00000317173.8_1_8:9911977-10102635:+|nuORF;ENST00000441698.6_1_8:9911977-10065409:+|nuORF 86.12129899796855 0.0160336270647063 3 PAPPPP[QP]{I|L} 9 0 + 71.838 0.0 0.0 7.8726 7.8726 97.168 0.0 0.0 0.0 57.2337408344179 9.085842975353629 9.085842975353629 53.76795939188455 0 2.1989700043360187 2.0 0.0 1.079689690656103 + + PAPPPP[QP]{I|L};P[W{I|L}]GA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};PQ[W{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};PQGPAA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L};P[W{I|L}]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 7.8726;1.9802;1.6651;1.5649;0.81234 +;-;-;-;- + 548 + 1 1.531 65230.7 1.0 4402 5271 9671 HBL1_DMSO_200M_050219_1,9675 HBL1_DMSO_200M_050219_1,9675,PAPPPPQPL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9676 50.606 140.0 531520.0 25 0 69619.0 44760 YPLNLPSV 8 87 451.7530328454394 901.4915127576788 2 451.7527343630791 MULTI CID FTMS 0 0 0 9671 362832.625 0.3904243270160734 4 -0.1964378356933593 5 Unmodified _YPLNLPSV_ ENSG00000158528|ENST00000433360|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A;nc|ENSG00000158528|Q9ULJ8|PPP1R9A 26.88365393820708 0.4786498634179528 3 YPPR 4 5 51.414 0.0 0.0 5.7033 0.0 0.0 0.0 385.2079662387805 385.2079662387805 31.5443874496362 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPPR 5.7033 - 262 + 1 1.531 64244.6 1.0 4403 5271 9671 HBL1_DMSO_200M_050219_1,9676 HBL1_DMSO_200M_050219_1,9676,YPLNLPSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9677 50.609 162.0 839740.0 25 0 103190.0 + 44481 YPADLAHKI 9 144 343.1905537857445 1026.5498319574335 3 343.1902343630791 MULTI CID FTMS 0 0 0 9671 330817.125 0.3093327657539227 -4 0.3783416748046875 6 Unmodified _YPADLAHKI_ ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC 18.721224879955976 0.3299216912490967 3 YPAD{I|L}AHK{I|L} 9 0 + 56.365 0.0 0.0 5.4907 5.4907 77.293 0.0 0.0 0.0 24.17368560510364 1.890562362200491 1.890562362200491 1.890562362200491 0 0.2742275032520141 0.7695510786217261 0.0 0.1549471895720985 + + YPAD{I|L}AHK{I|L};YPAD{I|L}AH{I|L}K;YP{I|L}{[DA]|[EG]}AHK{I|L};YPA{[DS]|[MA]|[CV]|TT}PHK{I|L};YP{I|L}{[DA]|[EG]}AH{I|L}K;YPAD{I|L}[RP]PV;YPA{[DS]|[MA]|[CV]|TT}PH{I|L}K;Y{I|L}P{[DA]|[EG]}AHK{I|L};Y{I|L}P{[DA]|[EG]}AH{I|L}K;YPW{I|L}V[PG]PV 5.4907;5.3065;4.0556;3.9835;3.8714;3.8648;3.7993;3.3532;3.169;2.8503 +;-;-;-;-;-;-;-;-;- + 1530 + 1 1.531 118543.6 1.0 4404 5271 9671 HBL1_DMSO_200M_050219_1,9677 HBL1_DMSO_200M_050219_1,9677,YPADLAHKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9678 50.611 128.0 734550.0 25 0 50597.0 42250 VSMLERKY 8 112 513.2755476651603 1024.5365423971205 2 514.2830078005791 MULTI CID FTMS 0 0 0 9671 250244.515625 0.1542712634500018 -4 0.3783416748046875 7 Unmodified _VSMLERKY_ ENST00000455209.5_1_22:38765323-38794807:-|nuORF 10.183394434864962 0.7604730176254005 3 EEAD{I|L}AHK{I|L} 9 7 + 25.13 0.0 0.0 2.4528 2.4528 66.201 0.0 0.0 0.0 0.1912611888104756 0.1912611888104756 0.1912611888104756 0.1912611888104756 0 0.0 0.0 0.0 0.0 EEAD{I|L}AHK{I|L};[VS][{I|L}P]A{I|L}DH{[CA]|SS};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV]{I|L}PHH;EEW{I|L}AHK{I|L};[PA]D[VP]RPHH;[HK]AW{I|L}PHH;[HA]KW{I|L}PHH;EEA[W{I|L}]HK{I|L};HHP{[DA]|[EG]}AHK{I|L};[VS][{I|L}P]A{[DA]|[EG]}PQQ 2.4528;2.4342;2.4298;2.1143;1.507;1.5037;1.3611;1.3375;1.3323;1.3136 -;-;-;-;-;-;-;-;-;- 795 + 1 1.531 83101.0 1.0 4405 5271 9671 HBL1_DMSO_200M_050219_1,9678 HBL1_DMSO_200M_050219_1,9678,VSMLERKY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9680 50.619 279.0 680930.0 25 0 46216.0 + 23221 LSSSPPHTV 9 153 462.7425465784538 923.4705402237078 2 462.7427245974541 MULTI CID FTMS 0 0 0 9679 260990.328125 0.9247878346030076 -1 0.0212020874023437 1 Unmodified _LSSSPPHTV_ ENST00000303714.8_1_2:69351749-69379334:+|nuORF 34.10243960390752 0.1078313939113124 3 [TA]PE{[VA]|[{I|L}G]}HTV 9 6 + 59.605 0.0 0.0 6.4544 6.4544 60.477 0.0 0.0 0.0 22.00296605556392 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.7689301784845295 0.0 [TA]PE{[VA]|[{I|L}G]}HTV;[TA]PE{[VA]|[{I|L}G]}HS{I|L};[TA]PE{[VA]|[{I|L}G]}{I|L}[HS];[EP]G{I|L}HS{I|L}[TA];[TA]PVHD{I|L}[TA];[TA][{M(Oxidation (M))|F}V]{[WT]|[RM]}S{I|L};[TA][{M(Oxidation (M))|F}V]{[WT]|[RM]}TV;[TA][QT]KG[YR];[H{I|L}]GEPS{I|L}[TA];{[TV]|[{I|L}S]}S[{M(Oxidation (M))|F}V]S{I|L}[TA] 6.4544;6.4544;4.8189;4.6828;4.1832;3.5575;3.5575;3.5437;3.4489;2.9325 -;-;-;-;-;-;-;-;-;- 1336 + 1 1.531 149125.7 1.0 4406 5272 9679 HBL1_DMSO_200M_050219_1,9680 HBL1_DMSO_200M_050219_1,9680,LSSSPPHTV True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9681 50.623 194.0 494100.0 25 0 43938.0 + 36538 TAITATLASL 10 119 481.28188018357673 960.5492074339536 2 481.2815429568291 MULTI CID FTMS 0 0 0 9679 308440.75 0.5492759317280027 -1 0.0212020874023437 2 Unmodified _TAITATLASL_ REV__ENST00000409177.5_1_2:105979801-106002969:-|nuORF 56.17704186161178 0.0466144807663799 3 [TA]{I|L}ET 5 -1 47.26 0.0 0.0 4.9201 0.0 0.0 0.0 442.2675264947876 442.2675264947876 8.849298064950354 0.0 0.0 0.0 0 0.9896518287104438 2.0 0.3807196863200844 0.0 [TA]{I|L}ET 4.9201 - 1830 + 1 1.531 77219.6 1.0 4407 5272 9679 HBL1_DMSO_200M_050219_1,9681 HBL1_DMSO_200M_050219_1,9681,TAITATLASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9682 50.63 439.0 381830.0 25 0 23390.0 + 26164 NPYYDSRVV 9 169 556.7721013597948 1111.5296497863894 2 556.7720214724541 MULTI CID FTMS 0 0 0 9679 171046.15625 0.4846507577885346 -1 0.0212020874023437 3 Unmodified _NPYYDSRVV_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 41.95555342248728 0.0647214845423414 3 NPYYDVKP 8 4 69.946 0.0 0.0 6.2928 0.0 0.0 0.0 132.04573999576408 132.04573999576408 57.18174465793528 0.0 0.0 0.0 0 0.805462187404089 1.2218487496163564 0.4247425010840047 0.0 NPYYDVKP 6.2928 - 988 + 1 1.531 135190.3 1.0 4408 5272 9679 HBL1_DMSO_200M_050219_1,9682 HBL1_DMSO_200M_050219_1,9682,NPYYDSRVV True True NPYYDSRVV 50.630454 556.772021472454 2433889.75 9679.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 6.731752872467041 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9683 50.635 236.0 458160.0 25 0 54330.0 7410 EGLAQGSSIQV 11 124 363.5251643455127 1087.553663636738 3 363.8558837771416 MULTI CID FTMS 0 0 0 9679 136829.953125 0.1007482699646648 -6 0.5035324096679688 4 Unmodified _EGLAQGSSIQV_ ENSG00000140853|ENST00000688547|NLRC5;ENST00000538453.5_1_16:57103718-57116437:+|nuORF;ENST00000543049.1_1_16:57114926-57116437:+|nuORF;ENST00000543103.1_1_16:57115217-57116437:+|nuORF;ENST00000545081.5_1_16:57093337-57116437:+|nuORF;nc|ENSG00000140853|Q86WI3-4|NLRC5 7.608950283845883 0.8392484121837455 3 [{I|L}P][HQ]GG{I|L}P 8 7 27.089 0.0 0.0 2.4908 0.0 0.0 0.0 285.0929424222638 285.0929424222638 7.535918783769091 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P][HQ]GG{I|L}P 2.4908 - 305 1 1.531 100348.5 1.0 4409 5272 9679 HBL1_DMSO_200M_050219_1,9683 HBL1_DMSO_200M_050219_1,9683,EGLAQGSSIQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9684 50.649 800.0 706540.0 25 0 57185.0 + 29248 QGYRMPRV 8 341 336.17999758999485 1005.5181633701844 3 336.1796752810478 MULTI CID FTMS 0 0 0 9679 124257.265625 0.2070268650592824 -12 1.0768814086914062 5 Unmodified _QGYRMPRV_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 29.081581746732265 0.4323690340403521 3 QGYRVMPR 8 2 + 28.172 0.0 0.0 2.8018 2.8018 70.127 0.0 0.0 0.0 13.774975391437277 0.8548055122727476 0.8548055122727476 2.207192444753865 0 0.0 0.0 0.0 0.3494850021680094 QGYRVMPR;QGYRVMRP;QGYRMVPR;QGYRM[RP]V;QGYRMVRP;QVG[YR]MPR;QVG[YR]MRP;QGYR{[{M(Oxidation (M))|F}H]|[RQ]}[KA];QGYRV[{I|L}V][DG];QV[YR]GMPR 2.8018;2.5822;2.5811;2.4777;2.3616;2.1548;1.9353;1.8465;1.5184;1.4597 -;-;-;+;-;-;-;-;-;- + 1184 + 1 1.531 441368.5 0.4699999988079071 4410 5272 9679 HBL1_DMSO_200M_050219_1,9684 HBL1_DMSO_200M_050219_1,9684,QGYRMPRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9685 50.663 800.0 179280.0 25 0 16138.0 + 26057 NMQETYTAY 9 173 560.7350014636011 1119.455449994002 2 560.7343017458916 MULTI CID FTMS 0 0 0 9679 122603.2109375 0.7447545176325961 -3 0.2173423767089843 6 Unmodified _NMQETYTAY_ ENSG00000114520|ENST00000251775|SNX4;ENST00000473417.5_1_3:125188296-125239016:-|nuORF 37.97399986684836 0.0865783450051559 3 [MN]QET 5 4 24.725 0.0 0.0 2.2086 0.0 0.0 0.0 513.1984483386053 513.1984483386053 -0.3472444566776147 0.0 -0.3472444566776147 0.0 0 0.0 1.0969100130080565 0.2887254899964357 0.4581706663129559 + [MN]QET 2.2086 + + 385 1 1.531 110271.7 0.6399999856948853 4411 5272 9679 HBL1_DMSO_200M_050219_1,9685 HBL1_DMSO_200M_050219_1,9685,NMQETYTAY True True NMQETYTAY 50.662508 560.734301745892 1162063.0 9679.0 ENST00000473417.5_1_3:125188296-125239016:-|nuORF;;ENSG00000114520|ENST00000251775|SNX4 6.676198323567708 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9687 50.668 60.0 835200.0 25 0 72342.0 + 29731 QPLQNVSTV 9 97 493.27097235410855 984.5273917750172 2 493.2691223025322 MULTI CID FTMS 0 0 0 9686 684657.4375 0.7718604457314595 4 -0.3017311096191406 1 Unmodified _QPLQNVSTV_ nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1 21.74664581756881 0.2544899275067181 3 HHTV 4 7 25.904 0.0 0.0 2.6311 0.0 0.0 492.2725527631015 0.0 492.2725527631015 0.0 19.45046257204389 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 HHTV 2.6311 - 212 + 1 1.577 44839.3 1.0 4412 5273 9686 HBL1_DMSO_200M_050219_1,9687 HBL1_DMSO_200M_050219_1,9687,QPLQNVSTV False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 9688 50.67 100.0 765380.0 25 0 48192.0 + 15260 IPHIHKSLI 9 111 529.3293986398052 1056.6442443464102 2 529.3295165896416 MULTI CID FTMS 0 0 0 9686 569228.6875 0.3235245159632006 4 -0.3017311096191406 2 Unmodified _IPHIHKSLI_ chr7:44834562-44835643|14|15.29|0.2|6.28|-|2|H2AZ2,None|2;ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-3|H2AZ2;nc|ENSG00000105968|Q71UI9-4|H2AZ2 53.40400417844725 0.0329064971918313 3 {I|L}PH{I|L}HKS{I|L}{I|L} 9 0 + 89.637 0.0 0.0 8.4831 8.4831 97.522 0.0 0.0 0.0 58.85583025471625 21.32122493362118 21.32122493362118 33.762874945799766 0 2.128144697160131 2.0 0.805462187404089 0.0 + + {I|L}PH{I|L}HKS{I|L}{I|L};[{I|L}P]H{I|L}HKS{I|L}{I|L};[{I|L}P]H[HK]{I|L}S{I|L}{I|L};[H{I|L}]P{I|L}HKS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}HKS{I|L}{I|L};[H{I|L}]P[HK]{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}T{I|L}TS{I|L}P{I|L}{I|L};{[TV]|[{I|L}S]}T{I|L}TP{I|L}S{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[HK]{I|L}S{I|L}{I|L};[H{I|L}][KS]{I|L}HP{I|L}{I|L} 8.4831;5.2879;4.8938;3.96;3.6002;3.5659;3.2624;3.2358;3.2062;3.1626 +;+;-;-;-;-;-;-;-;- + 673 + 1 1.577 67860.0 1.0 4413 5273 9686 HBL1_DMSO_200M_050219_1,9688 HBL1_DMSO_200M_050219_1,9688,IPHIHKSLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9689 50.671 21.0 5004200.0 25 0 1172200.0 25278 MYAPKPKVM 9 67 355.5266062368601 1063.5579893107804 3 355.5269042849541 MULTI CID FTMS 0 0 0 9686 939043.6875 0.848151720419206 -2 0.0721702575683593 3 Unmodified _MYAPKPKVM_ ENSG00000156218|ENST00000286744|ADAMTSL3;ENST00000561483.5_1_15:84323016-84694242:+|nuORF;nc|ENSG00000156218|P82987-2|ADAMTSL3 6.723162845929126 0.6799819581413107 3 VGHVM 5 7 28.416 0.0 0.0 2.6718 0.0 0.0 522.2792225568375 0.0 522.2792225568375 0.0 21.42667503568731 0.0 0.0 0 0.0 0.0 0.0 0.0 VGHVM 2.6718 - 51 1 1.577 96943.5 1.0 4414 5273 9686 HBL1_DMSO_200M_050219_1,9689 HBL1_DMSO_200M_050219_1,9689,MYAPKPKVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9690 50.672 53.0 1049000.0 25 0 137540.0 + -1 YAFNMKATV 9 91 530.255571908468 1058.496590883736 2 530.7600585818291 MULTI CID FTMS 0 0 0 9686 836545.875 0.3067332600061655 -2 0.0721702575683593 4 Carbamidomethyl (C) _SFKC(Carbamidomethyl (C))RTNF_ ENSG00000109971|ENST00000534624|HSPA8 8.593279151180031 0.7721714526254883 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CA]|SS}KATV 8 -1 36.763 0.0 0.0 3.4731 0.0 0.0 0.0 248.0793905265672 248.0793905265672 12.832144135156296 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.7059771852360797 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CA]|SS}KATV 3.4731 - 591 1 1.577 46996.6 1.0 4415 5273 9686 HBL1_DMSO_200M_050219_1,9690 HBL1_DMSO_200M_050219_1,9690,SFKCRTNF False False YAFNMKATV 50.672279 530.760058581829 27105902.0 9686.0 ENSG00000109971|ENST00000534624|HSPA8 6.148240725199382 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9691 50.674 49.0 1245500.0 25 0 101930.0 + 3640 DAELATRAL 9 90 480.2617235805239 958.5088942278478 2 480.2619506716728 MULTI CID FTMS 0 0 0 9686 687740.3125 0.2710069285557157 -2 0.0721702575683593 5 Unmodified _DAELATRAL_ ENSG00000173801|ENST00000393931|JUP 24.99096001346401 0.2132109383330889 3 {[DA]|[EG]}E{I|L}AT 6 3 59.411 0.0 0.0 6.1983 0.0 0.0 0.0 355.20945154361567 355.20945154361567 32.5784749426326 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3252574989159953 0.0 + {[DA]|[EG]}E{I|L}AT 6.1983 + + 196 + 1 1.577 52735.7 1.0 4416 5273 9686 HBL1_DMSO_200M_050219_1,9691 HBL1_DMSO_200M_050219_1,9691,DAELATRAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9692 50.676 99.0 701940.0 25 0 52152.0 + 30707 RFYESGSSL 9 114 523.251935545425 1044.48931815765 2 523.2513915896416 MULTI CID FTMS 0 0 0 9686 430169.21875 1.0 0 0.0 6 Unmodified _RFYESGSSL_ ENSG00000165259|ENST00000373177|HDX;ENST00000472135.2_1_X:83695455-83724556:-|nuORF;nc|ENSG00000165259|Q7Z353-2|HDX 51.629811660486645 0.0367964933207742 3 ESGSS{I|L} 6 3 55.636 0.0 0.0 5.3266 0.0 0.0 466.23164565254064 0.0 466.23164565254064 0.0 35.830181779913346 0.0 0.0 0 0.5 0.0 1.5994850021680094 0.0 + ESGSS{I|L} 5.3266 + + 496 1 1.577 59645.2 1.0 4417 5273 9686 HBL1_DMSO_200M_050219_1,9692 HBL1_DMSO_200M_050219_1,9692,RFYESGSSL True True RFYESGSSL 50.675724 523.251391589642 3325200.5 9686.0 ENST00000472135.2_1_X:83695455-83724556:-|nuORF;;nc|ENSG00000165259|Q7Z353-2|HDX;;ENSG00000165259|ENST00000373177|HDX 2.995258331298828 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9693 50.68 254.0 285720.0 25 0 34112.0 + 41897 VQDNPRALV 9 104 506.2828589782882 1010.5511650233764 2 506.2831909060478 MULTI CID FTMS 0 0 0 9686 198142.671875 0.8648311693909261 -2 0.0721702575683593 7 Unmodified _VQDNPRALV_ ENSG00000121289|ENST00000305768|CEP89;nc|ENSG00000121289|Q96ST8-2|CEP89 27.628801355627647 0.1796483985696185 3 {[QV]|[N{I|L}]|[RA]|[KV]}D 3 6 30.568 0.0 0.0 3.0249 0.0 0.0 0.0 665.3762132013638 665.3762132013638 12.07319274574106 0.0 0.0 0.0 0 0.9247425010840048 0.9208187539523752 0.0 0.6861818737241735 + {[QV]|[N{I|L}]|[RA]|[KV]}D 3.0249 + + 92 1 1.577 59731.2 1.0 4418 5273 9686 HBL1_DMSO_200M_050219_1,9693 HBL1_DMSO_200M_050219_1,9693,VQDNPRALV False True VQDNPRALV 50.680443 506.283190906048 1494107.5 9686.0 nc|ENSG00000121289|Q96ST8-2|CEP89;;ENSG00000121289|ENST00000305768|CEP89 1.9009547432263687 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9694 50.684 158.0 560220.0 25 0 34918.0 + -1 SPQQVVMF 8 131 476.2336925058831 950.4528320785662 2 476.2343017458916 MULTI CID FTMS 0 0 0 9686 187335.6875 0.702855945614078 4 -0.3017311096191406 8 Oxidation (M) _SPQQVVM(Oxidation (M))F_ REV__ENSG00000170677|ENST00000397942|SOCS6 21.74664581756881 0.5868176546531598 3 MPVTHHVM 8 -1 + 27.617 0.0 0.0 2.9057 2.9057 69.441 0.0 0.0 0.0 1.709661003999532 4.08850526781551 1.709661003999532 1.709661003999532 0 0.3494850021680094 0.0 0.0 0.0 MPVTHHVM;[{M(Oxidation (M))|F}T]YV[YK]M;[{M(Oxidation (M))|F}T]YVG[HD]{I|L};[{M(Oxidation (M))|F}T]YR[HD]{I|L};[{M(Oxidation (M))|F}T]Y[YK]VM;MPVTHHMV;[HV]{[CT]|[{M(Oxidation (M))|F}G]}[YN][KS];[QP]SAG[YN][KS];[AG]PSAG[YN][KS];[{M(Oxidation (M))|F}T]YVG[NP]GP 2.9057;2.7258;2.4755;2.0386;1.8496;1.4729;0.77002;0.76233;0.6624;0.49017 -;-;-;-;-;-;-;-;-;- 629 + 1 1.577 70826.3 1.0 4419 5273 9686 HBL1_DMSO_200M_050219_1,9694 HBL1_DMSO_200M_050219_1,9694,SPQQVVMF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9695 50.697 800.0 93429.0 25 0 5624.6 -1 PCECPEGLCH 10 129 629.7349044733274 1257.4552560134548 2 629.7358276247978 MULTI CID FTMS 0 0 0 9686 186119.9375 0.0800372223522466 6 -0.4987640380859375 9 3 Carbamidomethyl (C) _PC(Carbamidomethyl (C))EC(Carbamidomethyl (C))PEGLC(Carbamidomethyl (C))H_ ENSG00000074660|ENST00000263071|SCARF1;ENST00000570902.1_1_17:1542098-1543756:-|nuORF;ENST00000576012.5_1_17:1538054-1543444:-|nuORF;nc|ENSG00000074660|Q14162-3|SCARF1 3.5964929083625545 0.7100006075494749 3 ATNED 5 -1 21.713 0.0 0.0 1.7267 0.0 0.0 357.1272053316173 367.1052950494751 724.2325003810923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.3252574989159953 ATNED 1.7267 - 523 + 1 1.577 62844.7 0.8500000238418579 4420 5273 9686 HBL1_DMSO_200M_050219_1,9695 HBL1_DMSO_200M_050219_1,9695,PCECPEGLCH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9696 50.701 177.0 225870.0 25 0 23507.0 + 36120 SVSPVSPAPV 10 77 470.2607414012583 938.5069298693164 2 470.2624084353447 MULTI CID FTMS 0 0 0 9686 163222.734375 0.5179708079056501 -2 0.0721702575683593 10 Unmodified _SVSPVSPAPV_ REV__ENSG00000196428|ENST00000688009|TSC22D2;REV__nc|ENSG00000196428|O75157|TSC22D2 13.90604991867851 0.6142120002215601 3 {I|L}S 2 -1 16.454 0.0 0.0 1.7532 0.0 0.0 720.3799442509556 0.0 720.3799442509556 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}S 1.7532 - 44 + 1 1.577 37526.4 1.0 4421 5273 9686 HBL1_DMSO_200M_050219_1,9696 HBL1_DMSO_200M_050219_1,9696,SVSPVSPAPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9697 50.715 800.0 128450.0 25 0 13434.0 -1 RWWYWPMS 8 107 614.2756187228456 1226.536684512491 2 614.2757446169853 MULTI CID FTMS 0 0 0 9686 152010.03125 0.5070633939607981 -2 0.0721702575683593 11 Oxidation (M) _RWWYWPM(Oxidation (M))S_ ENST00000584716.1_1_17:30815096-30816294:+|nuORF 13.50788311687929 0.7113601687236069 3 {I|L}PS{M(Oxidation (M))|F} 4 -1 48.488 0.0 0.0 3.9532 0.0 0.0 764.3214604785218 0.0 764.3214604785218 0.0 21.27681482138009 0.0 0.0 0 0.8807196863200843 0.0 0.7742275032520141 0.0 {I|L}PS{M(Oxidation (M))|F} 3.9532 - 154 + 1 1.577 80498.6 0.7699999809265137 4422 5273 9686 HBL1_DMSO_200M_050219_1,9697 HBL1_DMSO_200M_050219_1,9697,RWWYWPMS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9698 50.721 368.0 201990.0 25 0 14548.0 + 27655 PLHCRPSV 8 117 454.743205065412 907.471857197624 2 454.7405883669853 MULTI CID FTMS 0 0 0 9686 152947.59375 0.2625499892980658 -3 0.1738014221191406 12 Unmodified _PLHCRPSV_ REV__ENST00000444521.6_1_1:2521013-2521196:+|nuORF 9.347437153973935 0.7675937258251505 3 SV 2 -1 24.883 0.0 0.0 2.742 0.0 0.0 703.360694943521 0.0 703.360694943521 0.0 12.63040144962352 0.0 0.0 0 0.5 0.0 0.1923877696554315 0.0 SV 2.742 + + 224 + 1 1.577 64149.7 1.0 4423 5273 9686 HBL1_DMSO_200M_050219_1,9698 HBL1_DMSO_200M_050219_1,9698,PLHCRPSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9699 50.724 161.0 725590.0 25 0 39441.0 + 23306 LTAEPFFVL 9 136 346.1948278666 1035.5626542 3 346.1954223513603 MULTI CID FTMS 0 0 0 9686 131836.640625 1.0 0 0.0 13 Unmodified _LTAEPFFVL_ REV__ENSG00000066923|ENST00000615138|STAG3;REV__nc|ENSG00000292277|Q9UJ98-3|STAG3;REV__nc|ENSG00000292277|Q9UJ98|STAG3 10.823927491677226 0.5436922275383211 3 [{I|L}T]MRRN{M(Oxidation (M))|F}V 8 -1 + 34.06 0.0 0.0 3.289 3.289 80.002 0.0 0.0 0.0 20.237703887755487 0.9028874993307312 0.9028874993307312 9.262137858390808 0 0.1237125054200235 2.0 0.5709991640913001 0.0 [{I|L}T]MRRN{M(Oxidation (M))|F}V;[{I|L}T]MRRGG{M(Oxidation (M))|F}V;{I|L}[HQ]RRMPV;[RP][YQ]N{I|L}{M(Oxidation (M))|F}V;{I|L}[HQ]RRMVP;[TP][HA][RK]MPV;{I|L}[HQ]{I|L}[QA]VEV;[RP][YQ]{I|L}N{M(Oxidation (M))|F}V;[RP][YQ]GG{I|L}{M(Oxidation (M))|F}V 3.289;2.3946;1.3348;0.97638;0.64606;0.61041;0.56289;0.51565;0.081978 -;-;-;-;-;-;-;-;- 217 1 1.577 97413.7 1.0 4424 5273 9686 HBL1_DMSO_200M_050219_1,9699 HBL1_DMSO_200M_050219_1,9699,LTAEPFFVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9700 50.733 479.0 381820.0 25 0 29905.0 9233 FGSEGGTYYI 10 227 365.1656312150195 1092.4750642452586 3 365.1655151247978 MULTI CID FTMS 0 0 0 9686 140011.25 1.0 0 0.0 14 Unmodified _FGSEGGTYYI_ ENSG00000116747|ENST00000400968|RO60;nc|ENSG00000116747|P10155-2|RO60;nc|ENSG00000116747|P10155-3|RO60;nc|ENSG00000116747|P10155-4|RO60;nc|ENSG00000116747|P10155-5|RO60 6.723162845929126 0.6955379296933136 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}[NG]YY{I|L} 9 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}[NG]YY + + 13.099 4.8431 0.50376 1.199 1.199 48.417 0.0 0.0 0.0 0.0 -6.71713116385931 -6.71713116385931 0.0 0 0.0 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}[NG]YY{I|L} 1.199 - 276 + 1 1.577 148439.2 1.0 4425 5273 9686 HBL1_DMSO_200M_050219_1,9700 HBL1_DMSO_200M_050219_1,9700,FGSEGGTYYI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9702 50.737 27.0 1074700.0 25 0 115200.0 + 36726 TDPQQRLL 8 62 485.7677648044928 969.5209766757856 2 485.7640563845634 MULTI CID FTMS 0 0 0 9701 1120782.125 0.239627366873789 -1 0.0704345703125 1 Unmodified _TDPQQRLL_ REV__ENSG00000074201|ENST00000525428|CLNS1A 10.183394434864962 0.7604730176254005 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KC]VV 6 -1 32.676 0.0 0.0 3.3703 0.0 0.0 0.0 293.1258333795532 293.1258333795532 17.191512336730028 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KC]VV 3.3703 - 48 + 1 1.577 27711.0 1.0 4426 5274 9701 HBL1_DMSO_200M_050219_1,9702 HBL1_DMSO_200M_050219_1,9702,TDPQQRLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9703 50.74 114.0 1118200.0 25 0 135830.0 + 24384 MFPEHAVKAY 10 125 398.1987997273793 1191.574569782338 3 398.1986877322197 MULTI CID FTMS 0 0 0 9701 340134.09375 0.4134920866477538 -4 0.2442359924316406 2 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 36.506200033944 0.1944608063770638 3 M{M(Oxidation (M))|F}PEHAVKAY 10 0 + 53.515 0.0 0.0 4.4911 4.4911 81.476 0.0 0.0 0.0 16.532125137753432 8.610810853964324 8.610810853964324 8.610810853964324 0 0.3494850021680094 0.0 0.0 0.0 + + M{M(Oxidation (M))|F}PEHAVKAY;M{M(Oxidation (M))|F}PEHAVK{M(Oxidation (M))|F}S;M{M(Oxidation (M))|F}PEHAVY[KA];M{M(Oxidation (M))|F}[H{I|L}]VA[{M(Oxidation (M))|F}E][KA] 4.4911;3.7685;3.0361;1.0902 +;-;-;- + 488 + 1 1.577 103757.1 1.0 4427 5274 9701 HBL1_DMSO_200M_050219_1,9703 HBL1_DMSO_200M_050219_1,9703,MFPEHAVKAY False True MFPEHAVKAY 50.739807 398.19868773222 88755625.0 9701.0 ENSG00000122965|ENST00000261741|RBM19 8.236579259236654 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9704 50.743 137.0 492200.0 25 0 105080.0 + 45959 YYYNGKAVY 9 85 570.7716671990999 1139.5287814649996 2 570.7716552615166 MULTI CID FTMS 0 0 0 9701 379884.21875 0.0524846582380089 -4 0.2442359924316406 3 Unmodified _YYYNGKAVY_ ENST00000563760.5_1_18:52921909-52988969:-|nuORF;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-6|TCF4 34.10243960390752 0.1078313939113124 3 YYYK{[QN]|[E{I|L}]|[KN]}VY 8 3 + 48.554 0.0 0.0 4.2609 4.2609 80.012 0.0 0.0 0.0 26.96517541959465 3.3939438749951734 3.3939438749951734 7.486512420283233 0 0.8494850021680094 2.0 0.9247425010840048 0.0 YYYK{[QN]|[E{I|L}]|[KN]}VY;YYYN[KQ]VY;YYYNG[KA]VY;[KG]NAYVYYY;[KG]NAVYYYY;[KG]NAYYYVY;YYYGG[KQ]VY;YYYGGG[KA]VY;[KG]NAYYVYY;[KG]GGAYVYYY 4.2609;3.6039;3.4896;3.0821;3.0821;2.8052;2.7911;2.6815;2.5645;2.274 -;-;+;-;-;-;-;-;-;- + 421 + 1 1.577 58246.3 1.0 4428 5274 9701 HBL1_DMSO_200M_050219_1,9704 HBL1_DMSO_200M_050219_1,9704,YYYNGKAVY True True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 9705 50.756 789.0 239730.0 25 0 21992.0 + 36447 SYYQSSVQY 9 162 562.7484639232616 1123.4823749133232 2 562.7480956912041 MULTI CID FTMS 0 0 0 9701 240755.796875 0.1504785332618304 -2 0.1214027404785156 4 Unmodified _SYYQSSVQY_ ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5 68.08070601005525 0.0218408846571049 3 [AG]YSYSS 7 7 45.561 0.0 0.0 4.0553 0.0 0.0 0.0 405.1782727006857 405.1782727006857 16.69943618202236 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.0994850021680094 0.0 [AG]YSYSS 4.0553 - 3408 1 1.577 142977.2 1.0 4429 5274 9701 HBL1_DMSO_200M_050219_1,9705 HBL1_DMSO_200M_050219_1,9705,SYYQSSVQY True True SYYQSSVQY 50.756241 562.748095691204 22336472.0 9701.0 nc|ENSG00000164818|Q86Y56-3|DNAAF5;;nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENSG00000164818|ENST00000297440|DNAAF5 9.10975742340088 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9706 50.76 179.0 313000.0 25 0 18901.0 + 26366 NSYVSPRI 8 95 468.2507486560251 934.4869443788502 2 468.2519409060478 MULTI CID FTMS 0 0 0 9701 171149.265625 0.0593736240086249 -4 0.2442359924316406 5 Unmodified _NSYVSPRI_ ENSG00000136536|ENST00000409175|MARCHF7;nc|ENSG00000136536|Q9H992-2|MARCHF7 41.8396318013385 0.2035142800366642 3 [NS]YVS[RP]{I|L} 8 0 + 50.896 0.0 0.0 5.4464 5.4464 85.478 0.0 0.0 0.0 39.11297301596369 3.945247061488857 3.945247061488857 9.20763613506633 0 0.9247425010840048 1.6989700043360187 0.0 0.3054621874040891 + + [NS]YVS[RP]{I|L};[NS]YV[RP]TV;[NS]YV[RP]S{I|L};[NS]{I|L}KKC(Carbamidomethyl (C))SV;[NS]Y{I|L}[RP]SV;[NS]{I|L}KK[CG]SV;[NS]{I|L}Y[RP]SV;[NS][KG]V[KC]TV;[NS][KG]V[KC]S{I|L} 5.4464;4.4611;4.4206;4.3409;3.3513;3.3497;2.4941;1.9137;1.8733 +;-;-;-;-;-;-;-;- + 206 + 1 1.577 52560.5 1.0 4430 5274 9701 HBL1_DMSO_200M_050219_1,9706 HBL1_DMSO_200M_050219_1,9706,NSYVSPRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9707 50.766 321.0 378130.0 25 0 28155.0 + 17287 KLQEKIQEL 9 139 564.8353857740003 1127.6562186148003 2 564.8343383669853 MULTI CID FTMS 0 0 0 9701 138679.796875 0.3089793423512782 -7 0.5209465026855469 6 Unmodified _KLQEKIQEL_ ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE 107.09958533191995 0.0072323465566536 3 {NN|[MP]|[D{I|L}]|[EV]}AAK{I|L}K{M(Oxidation (M))|F}{I|L} 9 5 52.099 0.0 0.0 4.6201 0.0 0.0 0.0 125.07935028888176 125.07935028888176 20.011933182118348 0.0 0.0 0.0 0 1.0189301784845295 1.6989700043360187 1.1883753548010496 0.6203715150305281 {NN|[MP]|[D{I|L}]|[EV]}AAK{I|L}K{M(Oxidation (M))|F}{I|L} 4.6201 - 1620 1 1.577 93789.5 1.0 4431 5274 9701 HBL1_DMSO_200M_050219_1,9707 HBL1_DMSO_200M_050219_1,9707,KLQEKIQEL True True KLQEKIQEL 50.765553 564.8355 1387222.0 9701.0 nc|ENSG00000138778|Q02224-3|CENPE;;ENSG00000138778|ENST00000265148|CENPE 2.5731062094370523 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9708 50.779 800.0 242020.0 25 0 30586.0 + -1 DAHNVQAVI 9 106 966.4326234561798 1930.85069397916 2 966.4321166872978 MULTI CID FTMS 0 0 0 9701 137122.359375 0.0721506947910273 12 -0.8948974609375 7 ENSG00000258890|ENST00000556440|CEP95;ENST00000580188.1_2_17:62503129-62515542:+|nuORF 3 {I|L}VAQVNW 7 -1 35.895 0.0 0.0 1.859 0.0 0.0 983.3655388051346 134.0247744195922 1117.390313224727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.0189301784845295 {I|L}VAQVNW 1.859 - 1084 + 1 1.577 129641.3 0.6200000047683716 4432 5274 9701 HBL1_DMSO_200M_050219_1,9708 HBL1_DMSO_200M_050219_1,9708, False False DAHNVQAVI 50.779418 966.432116687298 828621.0625 9701.0 ENSG00000258890|ENST00000556440|CEP95;;ENST00000580188.1_2_17:62503129-62515542:+|nuORF 3.35259680946668 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9709 50.787 413.0 318570.0 25 0 22211.0 -1 SVLKYCEP 8 169 498.24831089552737 994.4820688578548 2 499.2486755251884 MULTI CID FTMS 0 0 0 9701 114396.3984375 0.7272703477410559 -1 0.0704345703125 8 Carbamidomethyl (C) _SVLKYC(Carbamidomethyl (C))EP_ ENST00000492423.5_1_2:232651186-232653667:+|nuORF 15.847184025352805 0.6768015514314958 3 {[TV]|[{I|L}S]}V{[CP]|[EA]}[HN]EP 9 -1 + 35.895 0.0 0.0 3.6094 3.6094 73.156 0.0 0.0 0.0 6.111434613099458 14.09256854528806 6.111434613099458 3.0102999566398125 0 0.0 1.6989700043360187 0.8324385367314691 0.0 {[TV]|[{I|L}S]}V{[CP]|[EA]}[HN]EP;{[TV]|[{I|L}S]}D[{I|L}A][HN]EP;{[TV]|[{I|L}S]}V{[CP]|[EA]}[HQ]DP;{[TV]|[{I|L}S]}V[QA][HD]EP;VVT{[CP]|[EA]}[HN]EP;{[TV]|[{I|L}S]}D[{I|L}A][HQ]DP;[VS]{I|L}{[CP]|[EA]}[HN]EP;{[TV]|[{I|L}S]}V[QA]E[HD]P;VVT{[CP]|[EA]}[HQ]DP;[VS]E[{I|L}A][HN]EP 3.6094;3.3067;3.2093;3.0438;2.9949;2.9066;2.8733;2.7411;2.5947;2.5706 -;-;-;-;-;-;-;-;-;- 1241 1 1.577 101316.0 1.0 4433 5274 9701 HBL1_DMSO_200M_050219_1,9709 HBL1_DMSO_200M_050219_1,9709,SVLKYCEP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9711 50.791 4.2 12673000.0 25 0 1880800.0 + 16116 ITSSAVTTALK 11 72 546.3186031313584 1090.6226533295169 2 546.3191406130791 MULTI CID FTMS 0 0 0 9710 16995030.0 1.0 0 0.0 1 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 41.34703777101937 0.1916454788238683 3 {I|L}TSSAVTTA{I|L}K 11 0 + 104.55 0.0 0.0 9.5862 9.5862 99.517 0.0 0.0 0.0 84.88381606170074 14.819696850664116 14.819696850664116 104.54957850683124 0 0.4247425010840047 2.0 0.4247425010840047 0.2134679910804404 + + {I|L}TSSAVTTA{I|L}K 9.5862 + + 138 + 1 1.592 46313.0 1.0 4434 5275 9710 HBL1_DMSO_200M_050219_1,9711 HBL1_DMSO_200M_050219_1,9711,ITSSAVTTALK False True ITSSAVTTALK 50.791267 546.319140613079 169149696.0 9710.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 9.343088944753012 2.0 True 11.0 False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 9712 50.792 32.0 1801000.0 25 0 122270.0 + 26059 NMVAKVDEV 9 102 502.75812669504944 1003.5017004568988 2 502.7576476931572 MULTI CID FTMS 0 0 0 9710 1500062.125 0.2790082124526066 3 -0.2552337646484375 2 Unmodified _NMVAKVDEV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 36.12702656103203 0.0967173616627612 3 [MN]V{M(Oxidation (M))|F}DVVAG 9 5 55.851 0.0 0.0 5.5656 0.0 0.0 0.0 68.05127893619374 68.05127893619374 41.871987629411294 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.4247425010840047 0.0 [MN]V{M(Oxidation (M))|F}DVVAG 5.5656 - 211 + 1 1.592 52919.3 1.0 4435 5275 9710 HBL1_DMSO_200M_050219_1,9712 HBL1_DMSO_200M_050219_1,9712,NMVAKVDEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9713 50.794 24.0 2558700.0 25 0 269060.0 + + -1 LYRPGSVAY 9 78 513.2755476651603 1024.5365423971205 2 513.2745239138603 MULTI CID FTMS 0 0 0 9710 2401311.75 0.5638437906985836 -1 0.0538330078125 3 Oxidation (M) _IM(Oxidation (M))RSLGVAY_ ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY 29.081581746732265 0.1611639662936252 3 C(Carbamidomethyl (C))VAY 4 -1 32.907 0.0 0.0 3.2119 0.0 0.0 513.3129139630875 0.0 513.3129139630875 0.0 4.859856381998782 0.0 0.0 0 1.0 0.0 0.0 0.0 C(Carbamidomethyl (C))VAY 3.2119 - 245 1 1.592 53085.7 1.0 4436 5275 9710 HBL1_DMSO_200M_050219_1,9713 HBL1_DMSO_200M_050219_1,9713,IMRSLGVAY False False LYRPGSVAY 50.793624 513.27452391386 29029620.0 9710.0 ENSG00000131473|ENST00000352035|ACLY;;nc|ENSG00000131473|P53396-2|ACLY;;nc|ENSG00000131473|P53396-3|ACLY 7.101651032765706 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9714 50.795 35.0 1996900.0 25 0 341290.0 + 5759 DPPDGIKV 8 82 420.7266170421713 839.4386811511426 2 420.7266418337822 MULTI CID FTMS 0 0 0 9710 2218346.0 0.8424622073833258 8 -0.6411361694335938 4 Unmodified _DPPDGIKV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 36.12702656103203 0.299085846329477 3 DPPD{[VA]|[{I|L}G]}KV 8 0 + 66.337 0.0 0.0 7.9026 7.9026 95.704 0.0 0.0 0.0 51.51170788888047 8.404112767164733 8.404112767164733 18.48258770979733 0 0.75 2.0 0.0 0.2742275032520141 + + DPPD{[VA]|[{I|L}G]}KV;DPPK{[CA]|SS}[{I|L}P] 7.9026;5.7008 +;- + 118 + 1 1.592 56938.3 1.0 4437 5275 9710 HBL1_DMSO_200M_050219_1,9714 HBL1_DMSO_200M_050219_1,9714,DPPDGIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9715 50.796 49.0 1493800.0 25 0 201840.0 + 35911 SVNSVLSV 8 98 402.72768255464905 803.4408121760981 2 402.7266113162041 MULTI CID FTMS 0 0 0 9710 1610480.875 0.371890188679071 -1 0.0538330078125 5 Unmodified _SVNSVLSV_ ENST00000427501.5_1_6:86387567-86387600:-|nuORF 52.268347100219714 0.1285778651304833 3 [VS]NS{I|L}VSV 8 2 + 62.758 0.0 0.0 7.8111 7.8111 88.051 0.0 0.0 0.0 15.898255349109505 39.74214396804989 15.898255349109505 4.757724967479859 0 0.8182503180159344 1.5228787452803376 1.774227503252014 0.0 [VS]NS{I|L}VSV;[VS]NVTVSV;[VS]NSV{I|L}SV;[VS]GGS{I|L}VSV;[VS]NVS{I|L}SV;[VS]GGVTVSV;[VS]GGSV{I|L}SV;[KG]DS{I|L}VSV;[VS]{I|L}[NS]VSV;[VS]GGVS{I|L}SV 7.8111;7.2189;6.8863;6.6583;6.2942;6.0661;5.7335;5.3218;5.2312;5.1414 -;-;+;-;-;-;-;-;-;- + 421 1 1.592 61552.1 1.0 4438 5275 9710 HBL1_DMSO_200M_050219_1,9715 HBL1_DMSO_200M_050219_1,9715,SVNSVLSV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9716 50.797 52.0 1152900.0 25 0 121200.0 + 24972 MPPPPPQGV 9 94 460.23821592374895 918.461878914298 2 460.2390930056572 MULTI CID FTMS 0 0 0 9710 1069012.75 0.9281841290438396 -3 0.1752357482910156 6 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 93.88341677533236 0.0134066622201488 3 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 59.914 0.0 0.0 6.5233 6.5233 84.616 0.0 0.0 0.0 3.098943791441968 44.96584697476848 3.098943791441968 4.753865789229081 0 1.6549471895720984 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;[NP]NPPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPP[AG]R;{[HG]|PP}MPPPQ[VG];{[MG]|[TS]}HPPPQR;[PS][HT]PPQR;[VG][EP]HPQR;[NP]NPPP[AG]R;[NP]GGPPPQR 6.5233;6.0057;5.5457;5.5149;5.49;5.4339;4.7735;4.6456;4.5372;4.5372 -;+;-;-;-;-;-;-;-;- + 620 1 1.592 53851.2 1.0 4439 5275 9710 HBL1_DMSO_200M_050219_1,9716 HBL1_DMSO_200M_050219_1,9716,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9717 50.799 69.0 619420.0 25 0 50748.0 + 42696 VTWTSMSSW 9 90 542.7433920158232 1083.4722310984464 2 542.7443115115166 MULTI CID FTMS 0 0 0 9710 774868.4375 0.2274958161187013 -3 0.1752357482910156 7 Unmodified _VTWTSMSSW_ REV__ENST00000278671.9_1_11:71809441-71810244:-|nuORF 12.531546534597751 0.4974689918368763 3 VVA 3 -1 16.911 0.0 0.0 1.5608 0.0 0.0 0.0 811.2749709268245 811.2749709268245 2.157315214078505 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 VVA 1.5608 - 145 1 1.592 41124.6 1.0 4440 5275 9710 HBL1_DMSO_200M_050219_1,9717 HBL1_DMSO_200M_050219_1,9717,VTWTSMSSW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9718 50.803 176.0 721010.0 25 0 60395.0 + 4049 DALVLHKV 8 128 447.7735873918209 893.5326218504418 2 447.7742492556572 MULTI CID FTMS 0 0 0 9710 370174.0625 0.3755822116082769 -1 0.0538330078125 8 Unmodified _DALVLHKV_ ENSG00000163939|ENST00000707071|PBRM1;ENST00000480064.1_1_3:52643285-52649409:-|nuORF;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 48.345845343767074 0.1470278396477103 3 {[DA]|[EG]}{I|L}V{I|L}HKV 8 0 + 62.855 0.0 0.0 7.0345 7.0345 93.849 0.0 0.0 0.0 37.00853117955735 9.69766716947229 9.69766716947229 20.79689690656103 0 1.1549471895720984 1.6989700043360187 0.0 0.2614393726401688 + + {[DA]|[EG]}{I|L}V{I|L}HKV;V{[CP]|[EA]}V{I|L}HKV 7.0345;4.707 +;- + 248 + 1 1.592 102334.3 1.0 4441 5275 9710 HBL1_DMSO_200M_050219_1,9718 HBL1_DMSO_200M_050219_1,9718,DALVLHKV False True DALVLHKV 50.802505 447.774249255657 6957915.0 9710.0 nc|ENSG00000163939|Q86U86-7|PBRM1;;ENSG00000163939|ENST00000707071|PBRM1;;nc|ENSG00000163939|Q86U86-8|PBRM1;;nc|ENSG00000163939|Q86U86-4|PBRM1;;ENST00000480064.1_1_3:52643285-52649409:-|nuORF;;nc|ENSG00000163939|Q86U86-5|PBRM1;;nc|ENSG00000163939|Q86U86|PBRM1;;nc|ENSG00000163939|Q86U86-2|PBRM1;;nc|ENSG00000163939|Q86U86-3|PBRM1;;nc|ENSG00000163939|Q86U86-6|PBRM1;;nc|ENSG00000163939|Q86U86-9|PBRM1 5.589501857757568 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9719 50.807 266.0 253210.0 25 0 12032.0 + + 32230 YTAEGEINNV 10 131 555.2618623255096 1108.509171717819 2 555.2598754763603 MULTI CID FTMS 0 0 0 9710 335915.75 1.0 0 0.0 9 Unmodified _RWGYNSNNV_ ENSG00000136485|ENST00000614556|DCAF7;nc|ENSG00000136485|P61962-2|DCAF7 21.74664581756881 0.2544899275067181 3 [YT]{[CP]|[EA]}W{I|L} 6 -1 35.736 0.0 0.0 3.2238 0.0 0.0 0.0 342.1494054426816 342.1494054426816 8.812281309285623 0.0 0.0 0.0 0 0.3054621874040891 2.0 1.3807196863200843 0.0 [YT]{[CP]|[EA]}W{I|L} 3.2238 - 672 1 1.592 57403.8 1.0 4442 5275 9710 HBL1_DMSO_200M_050219_1,9719 HBL1_DMSO_200M_050219_1,9719,RWGYNSNNV False False YTAEGEINNV 50.80744 555.25987547636 1365453.875 9710.0 ENSG00000136485|ENST00000614556|DCAF7;;nc|ENSG00000136485|P61962-2|DCAF7 7.354877789815267 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9720 50.821 783.0 268720.0 25 0 18198.0 28979 QDNRQLYYENF 11 123 745.3384123200148 1488.6622717068294 2 745.3391601443291 MULTI CID FTMS 0 0 0 9710 284639.5625 0.2867105985894988 6 -0.4746322631835937 10 Unmodified _QDNRQLYYENF_ ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D 18.373094154950223 0.6529654022026722 3 {[QG]|[NA]}GAQ[R{M(Oxidation (M))|F}]CQNA{M(Oxidation (M))|F}Y 13 9 + 71.997 0.0 0.0 4.8364 4.8364 78.755 0.0 0.0 0.0 4.431890546242343 10.696083918116416 4.431890546242343 4.431890546242343 0 1.1069758080123702 1.0 0.0 2.3015384402724592 {[QG]|[NA]}GAQ[R{M(Oxidation (M))|F}]CQNA{M(Oxidation (M))|F}Y;{[HG]|PP}QPPPMCQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[{I|L}A]PMCQNA{M(Oxidation (M))|F}Y;[QP]PPPPMCQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQ[R{M(Oxidation (M))|F}]C[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[AG][R{M(Oxidation (M))|F}]CQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQ[R{M(Oxidation (M))|F}]CQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QQ[R{M(Oxidation (M))|F}]CQNA{M(Oxidation (M))|F}Y;{[HG]|PP}MPPEAQQNA{M(Oxidation (M))|F}Y 4.8364;4.5386;4.3245;4.3207;4.2798;4.2269;4.2269;4.2269;4.185;4.1312 -;-;-;-;-;-;-;-;-;- 6057 1 1.592 150876.4 1.0 4443 5275 9710 HBL1_DMSO_200M_050219_1,9720 HBL1_DMSO_200M_050219_1,9720,QDNRQLYYENF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9721 50.826 269.0 330710.0 25 0 51092.0 24368 MEVAAAKG 8 117 388.7021056995175 775.3896584658349 2 388.7018615603447 MULTI CID FTMS 0 0 0 9710 239954.328125 0.9393376959275692 -1 0.0538330078125 11 Unmodified _MEVAAAKG_ ENSG00000160216|ENST00000291572|AGPAT3;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3 16.942295170755138 0.6606234159769251 3 ME{I|L}ERV 6 6 + 60.17 0.0 0.0 7.76 7.76 91.389 0.0 0.0 0.0 48.18040976044614 7.422750325201406 7.422750325201406 8.470325397914564 0 0.3807196863200844 2.0 0.4247425010840047 0.0 ME{I|L}ERV;MEV[W{I|L}]V;MEQ[KQ]{I|L};MEQAAKV;MEV{[RE]|[WV]}{I|L};ME{I|L}[RD]{I|L};MEV[NG]KV;MEKQQ{I|L};ME[AG][KQ]{I|L};ME[AG]AAKV 7.76;6.6676;6.1772;5.9785;5.9501;5.789;5.7514;5.3348;4.9624;4.7752 -;-;-;-;-;-;-;-;-;- 90 + 1 1.592 74933.0 1.0 4444 5275 9710 HBL1_DMSO_200M_050219_1,9721 HBL1_DMSO_200M_050219_1,9721,MEVAAAKG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9722 50.832 337.0 125350.0 25 0 8014.8 + 33669 SIVRMYEEF 9 74 587.2855214872469 0 587.2855712771416 PEAK CID FTMS 0 0 0 9710 235557.328125 1.0 0 0.0 12 Unmodified _SIVRMYEEF_ REV__ENSG00000198843|ENST00000471696|SELENOT 17.11289562659939 0.230679707888486 3 {I|L}R 2 -1 16.454 0.0 0.0 1.4032 0.0 0.0 200.11711123445625 700.2440168007286 900.3611280351847 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L}R 1.4032 - 35 + 1 1.592 39154.2 1.0 4445 5275 9710 HBL1_DMSO_200M_050219_1,9722 HBL1_DMSO_200M_050219_1,9722,SIVRMYEEF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9723 50.846 800.0 153140.0 25 0 9498.9 + 935 AFIDRKDSYY 10 134 639.311164917849 1276.607776902498 2 639.3096801638603 MULTI CID FTMS 0 0 0 9710 242705.328125 0.5012967179095075 -3 0.1752357482910156 13 Unmodified _AFIDRKDSYY_ ENSG00000168397|ENST00000404914|ATG4B;ENST00000465399.5_1_2:242577129-242594780:+|nuORF;ENST00000475195.5_1_2:242577129-242594181:+|nuORF;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;ENST00000483778.5_1_2:242577129-242598587:+|nuORF;ENST00000493618.5_1_2:242577129-242598937:+|nuORF;ENST00000494465.5_1_2:242592964-242606150:+|nuORF;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;nc|ENSG00000168397|Q9Y4P1-3|ATG4B;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;nc|ENSG00000168397|Q9Y4P1-6|ATG4B 51.41523569358685 0.0718446036348414 3 {[YD]|[{M(Oxidation (M))|F}M]}AHV{I|L}DG{M(Oxidation (M))|F}{I|L}Q 11 9 + 52.943 0.0 0.0 4.1472 4.1472 71.401 0.0 0.0 0.0 1.037654377185369 1.037654377185369 1.037654377185369 1.037654377185369 0 1.0 1.3010299956639813 0.3494850021680094 0.0 {[YD]|[{M(Oxidation (M))|F}M]}AHV{I|L}DG{M(Oxidation (M))|F}{I|L}Q;{I|L}DA{M(Oxidation (M))|F}N{I|L}MKYY;{NN|[MP]|[D{I|L}]|[EV]}AD[NG]{I|L}DG{M(Oxidation (M))|F}{I|L}Q;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[YG]{M(Oxidation (M))|F}DG{M(Oxidation (M))|F}{I|L}Q;{I|L}[RH]GD{M(Oxidation (M))|F}[YE]{I|L}Q;{[YD]|[{M(Oxidation (M))|F}M]}AHV{I|L}CC{I|L}{I|L}Q;{[MS]|[{M(Oxidation (M))|F}A]}R[YT]S[YE]{I|L}Q;{I|L}DA{M(Oxidation (M))|F}GG{I|L}MKYY;{NN|[MP]|[D{I|L}]|[EV]}EEV{I|L}DG{M(Oxidation (M))|F}{I|L}Q;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[YG]S[MT]{M(Oxidation (M))|F}{I|L}Q 4.1472;4.0659;4.0035;3.7409;3.5781;3.4024;3.3791;3.348;3.2294;3.1554 -;-;-;-;-;-;-;-;-;- 2455 1 1.592 94574.8 0.9800000190734864 4446 5275 9710 HBL1_DMSO_200M_050219_1,9723 HBL1_DMSO_200M_050219_1,9723,AFIDRKDSYY True True AFIDRKDSYY 50.845921 639.30968016386 4373412.0 9710.0 nc|ENSG00000168397|Q9Y4P1-6|ATG4B;;ENST00000493618.5_1_2:242577129-242598937:+|nuORF;;ENST00000465399.5_1_2:242577129-242594780:+|nuORF;;ENSG00000168397|ENST00000404914|ATG4B;;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;;ENST00000494465.5_1_2:242592964-242606150:+|nuORF;;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;;nc|ENSG00000168397|Q9Y4P1-3|ATG4B;;ENST00000475195.5_1_2:242577129-242594181:+|nuORF;;ENST00000483778.5_1_2:242577129-242598587:+|nuORF 3.2737595240275064 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9724 50.86 800.0 272670.0 25 0 37274.0 + 12531 GVGPIRDV 8 186 406.7348314768105 811.455110020421 2 406.7348205447197 MULTI CID FTMS 0 0 0 9710 230297.5 0.569302008816799 -1 0.0538330078125 14 Unmodified _GVGPIRDV_ ENSG00000170043|ENST00000303731|TRAPPC1 27.628801355627647 0.4629596117395134 3 RGP{I|L} 4 5 37.607 0.0 0.0 4.6345 0.0 0.0 0.0 385.18436080463977 385.18436080463977 12.65270042307045 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 RGP{I|L} 4.6345 - 299 + 1 1.592 169700.1 0.8100000023841858 4447 5275 9710 HBL1_DMSO_200M_050219_1,9724 HBL1_DMSO_200M_050219_1,9724,GVGPIRDV False True GVGPIRDV 50.859736 406.73482054472 2379546.25 9710.0 ENSG00000170043|ENST00000303731|TRAPPC1 3.5386316776275635 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9725 50.865 234.0 397610.0 25 0 64302.0 21815 LPNKVQGI 8 94 434.7662036322309 867.5178543312618 2 434.7661620974541 MULTI CID FTMS 0 0 0 9710 219233.4375 0.1956082409263653 13 -1.0504837036132812 15 Unmodified _LPNKVQGI_ ENSG00000085185|ENST00000540052|BCORL1;nc|ENSG00000085185|Q5H9F3-1|BCORL1;nc|ENSG00000085185|Q5H9F3-4|BCORL1 20.871210003555333 0.6025813472596342 3 {I|L}PP 3 6 41.925 0.0 0.0 4.8327 0.0 0.0 0.0 557.3037203424436 557.3037203424436 27.320618910682484 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 {I|L}PP 4.8327 - 62 + 1 1.592 78032.3 1.0 4448 5275 9710 HBL1_DMSO_200M_050219_1,9725 HBL1_DMSO_200M_050219_1,9725,LPNKVQGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9726 50.879 800.0 154000.0 25 0 9913.3 -1 ISQYRFSTCVL 11 131 687.3486646282244 1372.6827763232486 2 687.3503906130791 MULTI CID FTMS 0 0 0 9710 188058.765625 1.0 0 0.0 16 Carbamidomethyl (C) _ISQYRFSTC(Carbamidomethyl (C))VL_ ENST00000594154.5_1_19:52536841-52536970:-|nuORF 19.361941925380144 0.6323962752489956 3 {[TV]|[{I|L}S]}VSNS[WP]SANV{I|L} 13 -1 + 83.37 0.0 0.0 6.0735 6.0735 81.534 0.0 0.0 0.0 3.3152207357208 16.642078980768062 3.3152207357208 3.3152207357208 0 0.7059771852360797 1.6989700043360187 1.0629529932484498 0.4247425010840047 {[TV]|[{I|L}S]}VSNS[WP]SANV{I|L};[KG]DSS{I|L}[WP]SANV{I|L};[KG]DSVT[WP]SANV{I|L};{[NV]|[RG]}SSS{I|L}[WP]SANV{I|L};[KG]DSVQQQSANV{I|L};[KG]DS{I|L}S[WP]SANV{I|L};{[TV]|[{I|L}S]}VS[DG][PS]QSANV{I|L};{[TV]|[{I|L}S]}[NG]PTV{[DS]|[MA]|[CV]|TT}SANV{I|L};{[TV]|[{I|L}S]}VSGGS[WP]SANV{I|L};{[TV]|[{I|L}S]}VSNS[WP]SAGGV{I|L} 6.0735;5.832;5.6271;5.5217;5.4822;5.4617;5.4321;5.4258;5.4126;5.4126 -;-;-;-;-;-;-;-;-;- 18868 1 1.592 91466.4 0.7599999904632568 4449 5275 9710 HBL1_DMSO_200M_050219_1,9726 HBL1_DMSO_200M_050219_1,9726,ISQYRFSTCVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9727 50.886 366.0 172630.0 25 0 10411.0 + 42761 VVGQTGVIRSV 11 109 557.8325765523583 1113.6506001715163 2 557.8329955935478 MULTI CID FTMS 0 0 0 9710 169037.0 1.0 0 0.0 17 Unmodified _VVGQTGVIRSV_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 22.774965066869 0.5574395181959457 3 VVGQTR{I|L}K{M(Oxidation (M))|F} 9 5 56.877 0.0 0.0 5.1072 0.0 0.0 0.0 82.06692682437733 82.06692682437733 42.95117001177921 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 VVGQTR{I|L}K{M(Oxidation (M))|F} 5.1072 - 233 + 1 1.592 58286.7 1.0 4450 5275 9710 HBL1_DMSO_200M_050219_1,9727 HBL1_DMSO_200M_050219_1,9727,VVGQTGVIRSV False True VVGQTGVIRSV 50.885732 557.832995593548 664921.5625 9710.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 5.813108921051025 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9728 50.893 422.0 525120.0 25 0 44285.0 + 4365 DATTIAKI 8 183 416.74242080731614 831.4702886814323 2 416.7416564822197 MULTI CID FTMS 0 0 0 9710 130250.7578125 0.0768896206109619 -3 0.1752357482910156 18 Unmodified _DATTIAKI_ ENSG00000105851|ENST00000496166|PIK3CG 46.020951573049366 0.1579632664462935 3 {[DA]|[EG]}TT{I|L}AK{I|L} 8 0 + 74.295 0.0 0.0 8.9354 8.9354 91.386 0.0 0.0 0.0 23.4948500216801 6.399407582191998 6.399407582191998 6.399407582191998 0 0.75 2.0 0.3252574989159953 0.2396518287104437 + + {[DA]|[EG]}TT{I|L}AK{I|L};{[DA]|[EG]}TT{I|L}A{I|L}K;{[DA]|[EG]}TT{I|L}{I|L}AK;[{I|L}T]A[K{I|L}]G{[ET]|[MV]} 8.9354;8.1658;6.4294;0.001142 +;-;-;- + 362 + 1 1.592 171712.2 1.0 4451 5275 9710 HBL1_DMSO_200M_050219_1,9728 HBL1_DMSO_200M_050219_1,9728,DATTIAKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9730 50.898 62.0 726830.0 25 0 82376.0 + 44800 YPNGHFVRV 9 80 363.5251643455127 1087.553663636738 3 363.8561889529228 MULTI CID FTMS 0 0 0 9729 697020.375 0.5132180148247194 -2 0.1602287292480468 1 Unmodified _YPNGHFVRV_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 15.847184025352805 0.4077185912009129 3 [{I|L}P]G{I|L} 4 7 26.911 0.0 0.0 2.4745 0.0 0.0 0.0 704.2870675276162 704.2870675276162 13.098943791441966 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P]G{I|L} 2.4745 - 115 1 1.603 47666.6 1.0 4452 5276 9729 HBL1_DMSO_200M_050219_1,9730 HBL1_DMSO_200M_050219_1,9730,YPNGHFVRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9731 50.9 57.0 1157800.0 25 0 193830.0 + 44482 YPADLAHKI 9 96 343.1905537857445 1026.5498319574335 3 343.1904479861259 MULTI CID FTMS 0 0 0 9729 714082.6875 0.6677077938494542 1 -0.0710678100585937 2 Unmodified _YPADLAHKI_ ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC 23.80106514851385 0.2283505500606397 3 YPAD{I|L}AHK{I|L} 9 0 + 60.052 0.0 0.0 5.8499 5.8499 91.525 0.0 0.0 0.0 34.1005558229044 8.530768805449185 8.530768805449185 54.321934681559256 0 0.3252574989159953 1.0969100130080565 0.0 0.25 + + YPAD{I|L}AHK{I|L};[HK]A{I|L}[{M(Oxidation (M))|F}V]A{[QN]|[E{I|L}]|[KN]};[HA]K{I|L}[{M(Oxidation (M))|F}V]A{[QN]|[E{I|L}]|[KN]} 5.8499;0.55818;0.38664 +;-;- + 384 + 1 1.603 65231.4 1.0 4453 5276 9729 HBL1_DMSO_200M_050219_1,9731 HBL1_DMSO_200M_050219_1,9731,YPADLAHKI False True YPADLAHKI 50.899692 343.190447986126 28574216.0 9729.0 ENSG00000134982|ENST00000257430|APC;;nc|ENSG00000134982|P25054-3|APC;;nc|ENSG00000134982|P25054-2|APC 6.20905351638794 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9732 50.901 43.0 1016200.0 25 0 139540.0 + 25121 MQDDNQVMV 9 77 540.2282424501385 1078.441931967077 2 540.2289916872978 MULTI CID FTMS 0 0 0 9729 1325408.625 0.1092678127263774 -3 0.2306632995605468 3 Unmodified _MQDDNQVMV_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 38.17557092003332 0.0854718145212029 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDNQVET 9 2 + 48.126 0.0 0.0 4.4626 4.4626 82.586 0.0 0.0 0.0 4.762036441594191 31.616225017174383 4.762036441594191 9.208187539523747 0 0.5484550065040282 0.0 0.0 1.1549471895720984 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDNQVET;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDN[AG]VET;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDGGQVET;{[QN]|[E{I|L}]|[KN]}DDMQVET;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))S]NQVET;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDGG[AG]VET;{[QN]|[E{I|L}]|[KN]}DDVC(Carbamidomethyl (C))VET;{[QN]|[E{I|L}]|[KN]}DDM[AG]VET;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))S]GGQVET;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))S]N[AG]VET 4.4626;3.6087;3.6087;3.2242;2.9451;2.759;2.3827;2.3704;2.0912;2.0912 -;-;-;-;-;-;-;-;-;- 148 1 1.603 41467.4 1.0 4454 5276 9729 HBL1_DMSO_200M_050219_1,9732 HBL1_DMSO_200M_050219_1,9732,MQDDNQVMV True True MQDDNQVMV 50.900913 540.228991687298 293329272.0 9729.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 7.257281303405762 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9733 50.902 47.0 1369100.0 25 0 113990.0 + -1 IPVGKSPMV 9 89 464.2698925080886 926.5252320829773 2 464.2699462771416 MULTI CID FTMS 0 0 0 9729 938748.1875 0.8285612453023742 -2 0.1602287292480468 4 Oxidation (M) _LPNM(Oxidation (M))PKLV_ nc|ENSG00000149657|Q9BX40-3|LSM14B;ENSG00000149657|ENST00000279068|LSM14B 24.67388899826682 0.525179942228231 3 {I|L}PV 3 -1 38.914 0.0 0.0 4.2 0.0 0.0 0.0 614.2990041831769 614.2990041831769 14.73320034371433 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 {I|L}PV 4.2 - 289 + 1 1.603 55896.5 1.0 4455 5276 9729 HBL1_DMSO_200M_050219_1,9733 HBL1_DMSO_200M_050219_1,9733,LPNMPKLV False False IPVGKSPMV 50.902181 464.269946277142 21591670.0 9729.0 nc|ENSG00000149657|Q9BX40-3|LSM14B;;ENSG00000149657|ENST00000279068|LSM14B 4.29262638092041 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9734 50.903 33.0 2934700.0 25 0 371940.0 + + 29443 QIYSHISYITRL 12 91 373.7054844675272 745.3964160018545 2 373.7054015994072 MULTI CID FTMS 0 0 0 9729 836494.5 0.6938084549389596 -2 0.1602287292480468 5 Unmodified _QLGSTGAL_ ENST00000442578.5_2_7:65894980-65944034:-|nuORF 15.768221252438446 0.6779680726941459 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TR{I|L} 6 -1 + 25.25 0.0 0.0 3.3874 3.3874 81.894 0.0 0.0 0.0 -0.4242316880483017 13.812281309285622 -0.4242316880483017 14.948500216800934 0 0.0 0.0 0.2396518287104437 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TR{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.3874;1.382 -;- 40 + 1 1.603 82049.9 1.0 4456 5276 9729 HBL1_DMSO_200M_050219_1,9734 HBL1_DMSO_200M_050219_1,9734,QLGSTGAL False False QIYSHISYITRL 50.903361 373.705401599407 3127462.5 9729.0 ENST00000442578.5_2_7:65894980-65944034:-|nuORF 1.977732261021932 4.0 False 12.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9735 50.905 66.0 924690.0 25 0 128650.0 26796 PAPPPPGLAP 10 100 457.2606336030221 912.5067142728444 2 457.2606689333916 MULTI CID FTMS 0 0 0 9729 746806.5 0.8713581000638374 1 -0.0710678100585937 6 Unmodified _PAPPPPGLAP_ ENSG00000248905|ENST00000616417|FMN1;nc|ENSG00000248905|Q68DA7-5|FMN1 70.86452775946826 0.0189087709248566 3 [PA]PPPPG 7 3 68.064 0.0 0.0 7.4591 0.0 0.0 0.0 296.1623898922381 296.1623898922381 50.01039045968258 0.0 0.0 0.0 0 2.110924374808178 2.0 0.0 0.0 + [PA]PPPPG 7.4591 + + 401 1 1.603 50788.9 1.0 4457 5276 9729 HBL1_DMSO_200M_050219_1,9735 HBL1_DMSO_200M_050219_1,9735,PAPPPPGLAP True False APPPPPPQI 50.904936 457.260668933392 61063272.0 9729.0 ENSG00000105722|ENST00000222329|ERF;;nc|ENSG00000105722|P50548-2|ERF 6.440239588419597 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9736 50.907 75.0 955960.0 25 0 107350.0 + 44761 YPPGVKEI 8 86 451.7530328454394 901.4915127576788 2 451.7529785037041 MULTI CID FTMS 0 0 0 9729 719567.0 0.7742866610133938 9 -0.6367301940917969 7 Unmodified _YPLNLPSV_ ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000083642|Q9NTI5-2|PDS5B;nc|ENSG00000083642|Q9NTI5-3|PDS5B;ENSG00000083642|ENST00000315596|PDS5B;ENST00000493653.1_1_13:33222909-33226198:+|nuORF;ENST00000466078.1_1_13:33222909-33223050:+|nuORF;ENST00000498550.5_1_13:33222909-33262824:+|nuORF;ENST00000506262.1_1_4:39978008-39978209:-|nuORF;nc|ENSG00000083642|Q9NTI5-4|PDS5B;nc|ENSG00000121892|Q29RF7-3|PDS5A 28.486842064014134 0.4448922141344407 3 YPPR 4 5 51.414 0.0 0.0 5.7033 0.0 0.0 0.0 385.2092086252604 385.2092086252604 30.79181246047625 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPPR 5.7033 - 274 + 1 1.603 61002.0 1.0 4458 5276 9729 HBL1_DMSO_200M_050219_1,9736 HBL1_DMSO_200M_050219_1,9736,YPLNLPSV False False YPPGVKEI 50.906661 451.752978503704 17534242.0 9729.0 ENSG00000121892|ENST00000303538|PDS5A;;nc|ENSG00000083642|Q9NTI5-2|PDS5B;;nc|ENSG00000083642|Q9NTI5-3|PDS5B;;ENSG00000083642|ENST00000315596|PDS5B;;ENST00000493653.1_1_13:33222909-33226198:+|nuORF;;ENST00000466078.1_1_13:33222909-33223050:+|nuORF;;ENST00000498550.5_1_13:33222909-33262824:+|nuORF;;ENST00000506262.1_1_4:39978008-39978209:-|nuORF;;nc|ENSG00000083642|Q9NTI5-4|PDS5B;;nc|ENSG00000121892|Q29RF7-3|PDS5A 1.894658741230766 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9737 50.909 118.0 792890.0 25 0 49745.0 + 31604 RQVPKLLSA 9 122 506.31907574208986 1010.6235985509798 2 506.3190490603447 MULTI CID FTMS 0 0 0 9729 637524.75 0.418145978276438 -2 0.1602287292480468 8 Unmodified _RQVPKLLSA_ ENSG00000070785|ENST00000360403|EIF2B3;nc|ENSG00000070785|Q9NR50-2|EIF2B3;nc|ENSG00000070785|Q9NR50-3|EIF2B3 38.17557092003332 0.0854718145212029 3 {[QV]|[N{I|L}]|[RA]|[KV]}R[KP]{I|L}{I|L}SA 9 2 + 50.518 0.0 0.0 4.9987 4.9987 72.521 0.0 0.0 0.0 0.1780307909408733 16.478174818886373 0.1780307909408733 0.1780307909408733 0 1.274227503252014 0.0 0.3494850021680094 0.2396518287104437 {[QV]|[N{I|L}]|[RA]|[KV]}R[KP]{I|L}{I|L}SA;{[{M(Oxidation (M))|F}H]|[RQ]}V[KP]{I|L}{I|L}SA;{[VA]|[{I|L}G]}GR[KP]{I|L}{I|L}SA;{[QV]|[N{I|L}]|[RA]|[KV]}R{I|L}[KP]{I|L}SA;{[{M(Oxidation (M))|F}H]|[RQ]}V{I|L}[KP]{I|L}SA;{[VA]|[{I|L}G]}GR{I|L}[KP]{I|L}SA;{I|L}{I|L}[KP][RN]{I|L}SA;{I|L}{I|L}[RN][KP]{I|L}SA;[KP]{I|L}{I|L}[RN]{I|L}SA;{[QV]|[N{I|L}]|[RA]|[KV]}R[KP]S{I|L}{I|L}A 4.9987;4.9811;4.8219;4.403;4.3853;4.2262;4.1632;3.8653;2.4158;2.0541 -;+;-;-;-;-;-;-;-;- + 400 1 1.603 77224.1 1.0 4459 5276 9729 HBL1_DMSO_200M_050219_1,9737 HBL1_DMSO_200M_050219_1,9737,RQVPKLLSA True True RQVPKLLSA 50.90911 506.319049060345 18220850.0 9729.0 nc|ENSG00000070785|Q9NR50-2|EIF2B3;;nc|ENSG00000070785|Q9NR50-3|EIF2B3;;ENSG00000070785|ENST00000360403|EIF2B3 4.977786699930827 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9738 50.912 115.0 527130.0 25 0 94469.0 + 40086 VGHVMGSAL 9 78 435.72884354134 869.44313414948 2 435.7288085818291 MULTI CID FTMS 0 0 0 9729 512100.40625 0.5148884952713635 -2 0.1602287292480468 9 Unmodified _VGHVMGSAL_ ENSG00000250479|ENST00000484558|CHCHD10;ENST00000440505.1_1_7:38351154-38351196:+|nuORF 26.34127834903884 0.1960301806784604 3 {[HG]|PP}VMGVSA{I|L} 9 2 + 30.529 0.0 0.0 3.5114 3.5114 72.928 0.0 0.0 0.0 3.0102999566398125 7.570612299704184 3.0102999566398125 3.0102999566398125 0 0.8182503180159344 0.0 0.3807196863200844 0.0 {[HG]|PP}VMGVSA{I|L};[HV]GMGVSA{I|L};{[HG]|PP}VV{[MG]|[TS]}SA{I|L};[HV]GV{[MG]|[TS]}SA{I|L};[HV]KA[EC]A{I|L};{[HG]|PP}{[WT]|[RM]}VSA{I|L};[HV][MN]VSA{I|L};{[SA]|[TG]}[WH]VSA{I|L};{[HG]|PP}[K{I|L}][EC]A{I|L} 3.5114;3.1651;3.1448;2.7985;1.9977;1.8509;1.5047;1.0147;0.87977 -;-;-;-;-;-;-;-;- 148 1 1.603 55203.8 1.0 4460 5276 9729 HBL1_DMSO_200M_050219_1,9738 HBL1_DMSO_200M_050219_1,9738,VGHVMGSAL False True VGHVMGSAL 50.911508 435.728808581829 10813325.0 9729.0 ENST00000440505.1_1_7:38351154-38351196:+|nuORF;;ENSG00000250479|ENST00000484558|CHCHD10 6.045530796051025 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9739 50.915 191.0 214080.0 25 0 29451.0 -1 0 64 644.3156870390011 643.308410572401 1 644.3161498904228 MULTI CID FTMS 0 0 0 9729 446622.21875 1.0 0 0.0 10 3 A 1 -1 3.4949 0.0 0.0 0.54326 0.0 0.0 96.98265354475171 472.2692659967407 569.2519195414924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.54326 - 1 + 1 1.603 37623.3 1.0 4461 5276 9729 HBL1_DMSO_200M_050219_1,9739 HBL1_DMSO_200M_050219_1,9739, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9740 50.919 176.0 971340.0 25 0 66669.0 + 29249 QGYRMPRV 8 162 336.17999758999485 1005.5181633701844 3 336.1799194216728 MULTI CID FTMS 0 0 0 9729 427413.40625 0.7121197874037558 -8 0.6083869934082031 11 Unmodified _QGYRMPRV_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 13.042465956692816 0.7182358012947757 3 Q[YG]RVMPR 8 2 + 17.522 0.0 0.0 1.7425 1.7425 66.986 0.0 0.0 0.0 5.259427501985062 0.4778244951058532 0.4778244951058532 0.9691001300805624 0 0.0 0.0 0.0 0.0 Q[YG]RVMPR;Q[YG]RMVPR;QV[YR]GMPR;QV[YN]V{[VA]|[{I|L}G]}DV;Q[YG]RV{[VA]|[{I|L}G]}DV;Q[YG]R{[{M(Oxidation (M))|F}H]|[RQ]}[KA];[KG][KG]MR{[QC]|[C(Carbamidomethyl (C))A]}V 1.7425;1.6462;1.4432;0.11423;0.11423;0.074073;0.045939 -;-;-;-;-;-;- 326 + 1 1.603 138565.6 1.0 4462 5276 9729 HBL1_DMSO_200M_050219_1,9740 HBL1_DMSO_200M_050219_1,9740,QGYRMPRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9741 50.924 306.0 347040.0 25 0 25759.0 25865 NLFEEQERQER 11 119 739.3549031268833 1476.6952533205665 2 739.3555786013603 MULTI CID FTMS 0 0 0 9729 283483.875 0.6620814142256195 -2 0.1602287292480468 12 Unmodified _NLFEEQERQER_ ENSG00000135148|ENST00000412615|TRAFD1 12.872603262515298 0.7673816944342327 3 {[QV]|[N{I|L}]|[RA]|[KV]}NAYY{[MG]|[TS]}G{M(Oxidation (M))|F}{I|L}QS 13 11 + 79.243 0.0 0.0 5.3662 5.3662 79.268 0.0 0.0 0.0 6.230374393639039 6.230374393639039 6.230374393639039 3.3321467903538178 0 2.135151878060192 2.0 0.0 1.1917509724019617 {[QV]|[N{I|L}]|[RA]|[KV]}NAYY{[MG]|[TS]}G{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NA[NS][TP]DG{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAYY[MN]{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAYY{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAD[NP]VM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NA[NS][KC]DGN{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAYY{[YD]|[{M(Oxidation (M))|F}M]}QVQS;{[QV]|[N{I|L}]|[RA]|[KV]}NAYYVM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAD[NP]YYAVHS;{[QV]|[N{I|L}]|[RA]|[KV]}NADQ[WK]HHQS 5.3662;5.1406;5.1203;5.001;4.9443;4.4944;4.4499;4.2578;4.1879;4.1759 -;-;-;-;-;-;-;-;-;- 2946 1 1.603 79323.5 1.0 4463 5276 9729 HBL1_DMSO_200M_050219_1,9741 HBL1_DMSO_200M_050219_1,9741,NLFEEQERQER False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9742 50.927 139.0 698220.0 25 0 48136.0 + -1 LYMVLVWI 8 107 526.7954294096551 1051.57630588611 2 526.7961303591728 MULTI CID FTMS 0 0 0 9729 284954.65625 0.2923556580046155 -2 0.1602287292480468 13 Oxidation (M) _LYM(Oxidation (M))VLVWI_ REV__ENSG00000126821|ENST00000247225|SGPP1 32.45364647766026 0.3613649037604678 3 {[DA]|[EG]}[R{I|L}]S{I|L}HQ{I|L} 9 -1 + 65.008 0.0 0.0 6.1819 6.1819 88.756 0.0 0.0 0.0 10.242275032520148 16.47817481888638 10.242275032520148 9.208187539523756 0 0.5891368308784531 1.6989700043360187 0.0 0.3252574989159953 {[DA]|[EG]}[R{I|L}]S{I|L}HQ{I|L};{[DA]|[EG]}[R{I|L}]S{I|L}H[AG]{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}HQ{I|L};{I|L}E[PG]{I|L}[WP]Q{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}H[AG]{I|L};{[VA]|[{I|L}G]}{[RE]|[WV]}S{I|L}HQ{I|L};{I|L}Y[RN][{M(Oxidation (M))|F}V]Q{I|L};[Y{I|L}][{M(Oxidation (M))|F}V][RN]Q{I|L};{I|L}[WP]{I|L}[WP]Q{I|L};{[VA]|[{I|L}G]}{[RE]|[WV]}S{I|L}H[AG]{I|L} 6.1819;5.3063;5.2079;4.5573;4.3323;3.54;3.159;3.0288;2.8727;2.6644 -;-;-;-;-;-;-;-;-;- 229 1 1.603 79783.1 1.0 4464 5276 9729 HBL1_DMSO_200M_050219_1,9742 HBL1_DMSO_200M_050219_1,9742,LYMVLVWI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9743 50.931 182.0 523320.0 25 0 85911.0 + 9467 FLDEKTHEL 9 116 377.85964407534334 1130.55710282623 3 377.8607665896416 MULTI CID FTMS 0 0 0 9729 208516.640625 0.9961257651731348 -2 0.1602287292480468 14 Unmodified _FLDEKTHEL_ ENSG00000129317|ENST00000344862|PUS7L 23.78978130925829 0.2284941198415988 3 {I|L}{[YC]|[HE]}KED{I|L}E 8 6 43.594 0.0 0.0 3.8559 0.0 0.0 119.07386214423984 0.0 119.07386214423984 0.0 13.521825181113623 0.0 0.0 0 0.5228787452803376 0.0 0.5 0.0 {I|L}{[YC]|[HE]}KED{I|L}E 3.8559 - 437 1 1.603 82517.9 1.0 4465 5276 9729 HBL1_DMSO_200M_050219_1,9743 HBL1_DMSO_200M_050219_1,9743,FLDEKTHEL False True FLDEKTHEL 50.930564 377.860766589642 1774474.625 9729.0 ENSG00000129317|ENST00000344862|PUS7L 5.103522300720215 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9744 50.944 800.0 169850.0 25 0 11323.0 + 24388 MFPEHAVKAY 10 144 596.793811349166 1191.573069765132 2 596.7950317263603 MULTI CID FTMS 0 0 0 9729 207156.09375 0.940822583846494 -2 0.1602287292480468 15 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 53.40400417844725 0.0601721406801337 3 M{M(Oxidation (M))|F}PEHAVKAY 10 0 + 62.835 0.0 0.0 5.2733 5.2733 87.229 0.0 0.0 0.0 2.724060122673393 14.146518864155126 2.724060122673393 13.55388478663194 0 1.4802046884880935 0.0 0.0 0.0 + + M{M(Oxidation (M))|F}PEHAVKAY;M{M(Oxidation (M))|F}Y[RD]VKAY;M{M(Oxidation (M))|F}PEHAVY[KA];M{M(Oxidation (M))|F}PEHA[K{I|L}]GY;M{M(Oxidation (M))|F}Y[RD]VY[KA];M{M(Oxidation (M))|F}Y[RD][K{I|L}]GY;{[C(Carbamidomethyl (C))E]|[WC]}[KS]HAVKAY;{[C(Carbamidomethyl (C))E]|[WC]}{[VA]|[{I|L}G]}AKVA[EC]{I|L};{[C(Carbamidomethyl (C))E]|[WC]}[KS]HAVY[KA];{[C(Carbamidomethyl (C))E]|[WC]}[Q{I|L}]KVA[EC]{I|L} 5.2733;4.1358;3.8045;3.3287;2.6671;2.1913;2.1271;1.4174;0.65837;0.54601 +;-;-;-;-;-;-;-;-;- + 596 + 1 1.603 103694.2 0.9300000071525574 4466 5276 9729 HBL1_DMSO_200M_050219_1,9744 HBL1_DMSO_200M_050219_1,9744,MFPEHAVKAY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9745 50.95 334.0 206130.0 25 0 11940.0 + 39196 TYQQVQQTL 9 112 554.785135672662 1107.555718412124 2 554.7852050662041 MULTI CID FTMS 0 0 0 9729 189390.609375 0.0884626467921008 -2 0.1602287292480468 16 Unmodified _TYQQVQQTL_ ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42 32.78568957990786 0.1150597335874693 3 [YT]QQVQ 6 3 38.958 0.0 0.0 3.5174 0.0 0.0 0.0 357.1786791877677 357.1786791877677 9.005602274183456 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 + [YT]QQVQ 3.5174 + + 846 1 1.603 57898.6 1.0 4467 5276 9729 HBL1_DMSO_200M_050219_1,9745 HBL1_DMSO_200M_050219_1,9745,TYQQVQQTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9746 50.964 800.0 110940.0 25 0 5567.2 + -1 VEELNAMCMIY 11 112 702.7950776096695 1403.575602286139 2 702.7948486208916 MULTI CID FTMS 0 0 0 9729 123358.7578125 1.0 0 0.0 17 Carbamidomethyl (C),2 Oxidation (M) _VEELNAM(Oxidation (M))C(Carbamidomethyl (C))M(Oxidation (M))IY_ REV__ENST00000564306.5_1_15:65892084-65903486:-|nuORF 11.494710602746466 0.7960433852372589 3 {NN|[MP]|[D{I|L}]|[EV]}D{I|L}Q 5 -1 38.729 0.0 0.0 2.7593 0.0 0.0 0.0 816.2710728274077 816.2710728274077 14.163221059424949 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.5796896906561032 0.0 {NN|[MP]|[D{I|L}]|[EV]}D{I|L}Q 2.7593 - 1102 1 1.603 66663.6 0.7400000095367432 4468 5276 9729 HBL1_DMSO_200M_050219_1,9746 HBL1_DMSO_200M_050219_1,9746,VEELNAMCMIY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9748 50.969 19.0 1594000.0 25 0 105710.0 21512 LPIGEDGLMD 10 58 530.255571908468 1058.496590883736 2 530.2521240115166 MULTI CID FTMS 0 0 0 9747 1470645.875 0.5357834997236645 1 -0.0777702331542968 1 Unmodified _LPIGEDGLMD_ ENSG00000165359|ENST00000639893|INTS6L;ENST00000481908.5_1_X:134654863-134703297:+|nuORF;nc|ENSG00000165359|Q5JSJ4|INTS6L 14.838274106304384 0.5985701837916485 3 {I|L}P{I|L}S{[SA]|[TG]}H 7 6 57.479 0.0 0.0 5.4302 0.0 0.0 0.0 350.08493982486567 350.08493982486567 46.99433219358141 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 {I|L}P{I|L}S{[SA]|[TG]}H 5.4302 - 38 + 1 1.603 31332.9 1.0 4469 5277 9747 HBL1_DMSO_200M_050219_1,9748 HBL1_DMSO_200M_050219_1,9748,LPIGEDGLMD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9749 50.97 46.0 811770.0 25 0 73853.0 3641 DAELATRAL 9 55 480.2617235805239 958.5088942278478 2 480.2616760134697 MULTI CID FTMS 0 0 0 9747 734273.0 0.2893433274661953 2 -0.1970329284667968 2 Unmodified _DAELATRAL_ ENSG00000173801|ENST00000393931|JUP 19.361941925380144 0.3125782356748823 3 {[DA]|[EG]}E{I|L}AT{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 9 0 + 54.402 0.0 0.0 5.6757 5.6757 90.904 0.0 0.0 0.0 42.18388217506849 0.5014445271442725 0.5014445271442725 54.40236967123205 0 1.0 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}E{I|L}AT{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 5.6757 + + 30 + 1 1.603 33036.2 1.0 4470 5277 9747 HBL1_DMSO_200M_050219_1,9749 HBL1_DMSO_200M_050219_1,9749,DAELATRAL False True DAELATRAI 50.969971 480.26167601347 26046302.0 9747.0 ENSG00000168036|ENST00000349496|CTNNB1 2.668849249680837 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9750 50.971 38.0 2023300.0 25 0 253930.0 + 2361 AQLPSNVQV 9 104 478.2636403675461 0 478.2635375857353 PEAK CID FTMS 0 0 0 9747 1099142.375 0.3821814798295427 -1 0.0710678100585937 3 Unmodified _AQLPSNVQV_ REV__ENSG00000184985|ENST00000507866|SORCS2 39.957323273325 0.0619271662220897 3 VT{I|L}Q 4 -1 28.448 0.0 0.0 2.9804 0.0 0.0 245.1346282919297 265.0947664850219 510.2293947769516 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.8494850021680094 0.3494850021680094 VT{I|L}Q 2.9804 - 320 + 1 1.603 62415.1 1.0 4471 5277 9747 HBL1_DMSO_200M_050219_1,9750 HBL1_DMSO_200M_050219_1,9750,AQLPSNVQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9751 50.973 68.0 1413900.0 25 0 224540.0 + 36408 SYSYQSRF 8 108 519.2376176119122 1036.4606822906244 2 519.2378417849541 MULTI CID FTMS 0 0 0 9747 647847.375 0.970439286210814 -1 0.0710678100585937 4 Unmodified _SYSYQSRF_ ENSG00000189091|ENST00000302516|SF3B3 52.268347100219714 0.1285778651304833 3 YSSYQ 5 5 71.159 0.0 0.0 6.8655 0.0 0.0 0.0 405.1895235651001 405.1895235651001 59.73866682974163 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.3494850021680094 0.7614393726401688 YSSYQ 6.8655 - 192 + 1 1.603 77627.4 1.0 4472 5277 9747 HBL1_DMSO_200M_050219_1,9751 HBL1_DMSO_200M_050219_1,9751,SYSYQSRF True True SYSYQSRF 50.972781 519.237841784954 4862117.0 9747.0 ENSG00000189091|ENST00000302516|SF3B3 5.99252971013387 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9752 50.975 97.0 471900.0 25 0 39197.0 + -1 TPLVSCPLV 9 76 493.27097235410855 984.5273917750172 2 493.7739440798759 MULTI CID FTMS 0 0 0 9747 441139.375 0.5907253122234727 -1 0.0710678100585937 5 Carbamidomethyl (C) _TPLVSC(Carbamidomethyl (C))PLV_ REV__ENST00000421712.1_1_7:2582898-2583233:-|nuORF 16.942295170755138 0.3780752226737986 3 [VP]PSV 5 -1 14.812 0.0 0.0 1.5045 0.0 0.0 0.0 502.2286649179508 502.2286649179508 2.337717472008247 0.0 0.0 0.0 0 0.0 0.0 0.6139829889124311 0.0 [VP]PSV 1.5045 - 74 1 1.603 44350.5 1.0 4473 5277 9747 HBL1_DMSO_200M_050219_1,9752 HBL1_DMSO_200M_050219_1,9752,TPLVSCPLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9753 50.977 78.0 793510.0 25 0 129110.0 + 44801 YPNGHFVRV 9 92 363.5251643455127 1087.553663636738 3 363.5259582400322 MULTI CID FTMS 0 0 0 9747 390734.0 0.1662446029452559 -2 0.1774635314941406 6 Unmodified _YPNGHFVRV_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 30.63653989081413 0.1413794767160703 3 YPNGH{M(Oxidation (M))|F}VRV 9 0 + 64.056 0.0 0.0 5.8899 5.8899 77.47 0.0 0.0 0.0 53.6772662347892 6.655462488490684 6.655462488490684 1.249387366082999 0 0.0 1.0457574905606752 0.0 0.4247425010840047 + + YPNGH{M(Oxidation (M))|F}VRV;YPNGHV{M(Oxidation (M))|F}RV;YPGGGH{M(Oxidation (M))|F}VRV;YPGGGHV{M(Oxidation (M))|F}RV;YPNGHR[{M(Oxidation (M))|F}V]V;YPNV{[HG]|PP}{M(Oxidation (M))|F}RV;YPN[RH]{M(Oxidation (M))|F}RV;YPGGGHR[{M(Oxidation (M))|F}V]V;YPGGV{[HG]|PP}{M(Oxidation (M))|F}RV;YPNV[{I|L}P]AAM{I|L} 5.8899;5.775;5.0432;4.9283;4.5575;3.889;3.732;3.7108;3.0423;3.0263 +;-;-;-;-;-;-;-;-;- + 254 + 1 1.603 59401.8 1.0 4474 5277 9747 HBL1_DMSO_200M_050219_1,9753 HBL1_DMSO_200M_050219_1,9753,YPNGHFVRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9754 50.989 688.0 408810.0 25 0 92109.0 + 45965 YYYNGKAVYA 10 172 606.2902858024082 1210.5660186716163 2 606.2909423708916 MULTI CID FTMS 0 0 0 9747 278253.5 0.3424127721741591 -1 0.0710678100585937 7 Unmodified _YYYNGKAVYA_ ENST00000563760.5_1_18:52921909-52988969:-|nuORF;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-6|TCF4 81.89019881105858 0.0155187237978306 3 YYYNG 5 5 62.081 0.0 0.0 5.1282 0.0 0.0 0.0 547.2892550104124 547.2892550104124 3.8830962396227946 0.0 0.0 0.0 0 0.9531198197908842 2.0 0.0 0.3252574989159953 + YYYNG 5.1282 + + 4009 + 1 1.603 202941.4 1.0 4475 5277 9747 HBL1_DMSO_200M_050219_1,9754 HBL1_DMSO_200M_050219_1,9754,YYYNGKAVYA True True YYYNGKAVYA 50.988625 606.290942370892 12329615.0 9747.0 ENST00000563760.5_1_18:52921909-52988969:-|nuORF;;nc|ENSG00000196628|P15884-2|TCF4;;nc|ENSG00000196628|P15884-6|TCF4 5.772899786631267 2.0 True 10.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 9755 50.995 355.0 594460.0 25 0 61278.0 -1 TPCFFPAT 8 175 470.7137007467617 939.4128485603236 2 470.7139160037041 MULTI CID FTMS 0 0 0 9747 268589.53125 0.3727850495016009 -3 0.2312965393066406 8 Carbamidomethyl (C) _TPC(Carbamidomethyl (C))FFPAT_ ENST00000476577.5_1_22:32010650-32011059:+|nuORF 18.13498045792455 0.6430038125133779 3 {[SA]|[TG]}[HC]PE{I|L}PS 9 -1 + 48.921 0.0 0.0 5.2076 5.2076 84.339 0.0 0.0 0.0 15.641489036551626 6.712250816996303 6.712250816996303 9.151355113598122 0 -0.0435391898196204 1.6989700043360187 1.5253187046026266 0.0 {[SA]|[TG]}[HC]PE{I|L}PS;{[SA]|[TG]}[HC]HA{I|L}{[DS]|[MA]|[CV]|TT};{[SA]|[TG]}[EP]HC{I|L}PS;[HT]C(Carbamidomethyl (C))PE{I|L}PS;{[DS]|[MA]|[CV]|TT}{I|L}CS{M(Oxidation (M))|F}PTA;{[WT]|[RM]}{M(Oxidation (M))|F}SC{I|L}PS;[TP]ADHC{I|L}PS;[TP][C(Carbamidomethyl (C))H]E{I|L}PS;{[DS]|[MA]|[CV]|TT}{I|L}CS{M(Oxidation (M))|F}TPA;[HT]C(Carbamidomethyl (C))HA{I|L}{[DS]|[MA]|[CV]|TT} 5.2076;4.2334;3.799;3.5425;3.2788;3.0434;2.9672;2.82;2.7087;2.5684 -;-;-;-;-;-;-;-;-;- 1599 1 1.603 163053.3 1.0 4476 5277 9747 HBL1_DMSO_200M_050219_1,9755 HBL1_DMSO_200M_050219_1,9755,TPCFFPAT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9756 51.009 780.0 197850.0 25 0 25479.0 -1 RWWYWPMS 8 119 614.2756187228456 1226.536684512491 2 614.2753784060478 MULTI CID FTMS 0 0 0 9747 212398.78125 0.7085035507731476 2 -0.1970329284667968 9 Oxidation (M) _RWWYWPM(Oxidation (M))S_ ENST00000584716.1_1_17:30815096-30816294:+|nuORF 13.50788311687929 0.7113601687236069 3 {I|L}PS{M(Oxidation (M))|F} 4 -1 48.488 0.0 0.0 3.9532 0.0 0.0 764.3214153152904 0.0 764.3214153152904 0.0 23.06933472159166 0.0 0.0 0 0.8807196863200843 0.0 0.7742275032520141 0.0 {I|L}PS{M(Oxidation (M))|F} 3.9532 - 274 + 1 1.603 118655.6 1.0 4477 5277 9747 HBL1_DMSO_200M_050219_1,9756 HBL1_DMSO_200M_050219_1,9756,RWWYWPMS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9757 51.022 800.0 163010.0 25 0 31357.0 -1 0 67 1091.103545306178 3270.2888065187344 3 1091.437548816204 MULTI CID FTMS 0 0 0 9747 183559.5 0.684098536955551 1 -0.0777702331542968 10 3 TT 2 -1 8.4604 0.0 0.0 0.25871 0.0 0.0 2397.9052760382924 667.2713870130335 3065.1766630513257 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 TT 0.25871 - 67 + 1 1.603 106690.2 0.7200000286102295 4478 5277 9747 HBL1_DMSO_200M_050219_1,9757 HBL1_DMSO_200M_050219_1,9757, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9758 51.028 329.0 444930.0 25 0 23408.0 + 31201 RLQEEINEV 9 158 565.2968358917584 0 565.2963744997978 PEAK CID FTMS 0 0 0 9747 173900.875 0.5805561409402274 -1 0.0710678100585937 11 Unmodified _RLQEEINEV_ nc|ENSG00000166130|Q70UQ0-2|IKBIP;nc|ENSG00000166130|Q70UQ0|IKBIP 49.55428908609986 0.0328875595922215 3 EN{I|L}EEQ 6 6 50.783 0.0 0.0 4.4998 0.0 0.0 117.07831420605083 266.1630953424438 383.2414095484946 0.0 0.0 0.0 0.0 0 0.4698565171985375 0.0 0.2887254899964357 1.3556270500406935 EN{I|L}EEQ 4.4998 - 1330 + 1 1.603 112768.3 1.0 4479 5277 9747 HBL1_DMSO_200M_050219_1,9758 HBL1_DMSO_200M_050219_1,9758,RLQEEINEV True True RLQEEINEV 51.028401 565.296374499798 1706212.625 9747.0 nc|ENSG00000166130|Q70UQ0-2|IKBIP;;nc|ENSG00000166130|Q70UQ0|IKBIP 7.2090269724528 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 9759 51.042 800.0 553090.0 25 0 131470.0 + 25131 MQDESFCSN 9 233 559.2021470621363 1116.3897411910723 2 559.2017700076103 MULTI CID FTMS 0 0 0 9747 169184.21875 0.2981468607181084 -3 0.2312965393066406 12 Carbamidomethyl (C) _MQDESFC(Carbamidomethyl (C))SN_ REV__ENSG00000157106|ENST00000446231|SMG1;REV__nc|ENSG00000157106|Q96Q15-2|SMG1;REV__nc|ENSG00000157106|Q96Q15-3|SMG1;REV__nc|ENSG00000157106|Q96Q15-4|SMG1 53.832793166522166 0.0319663582346103 3 VGCDDNCS 8 -1 53.307 0.0 0.0 4.775 0.0 0.0 0.0 320.1366366022094 320.1366366022094 30.09710525023323 0.0 0.0 0.0 0 1.3983025252708456 1.2218487496163564 0.535666875892183 1.5629529932484498 VGCDDNCS 4.775 - 1579 + 1 1.603 329162.4 0.9300000071525574 4480 5277 9747 HBL1_DMSO_200M_050219_1,9759 HBL1_DMSO_200M_050219_1,9759,MQDESFCSN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9761 51.047 8.5 6078500.0 25 0 1374800.0 + 45960 YYYNGKAVY 9 68 570.7716671990999 1139.5287814649996 2 570.7718994021416 MULTI CID FTMS 0 0 0 9760 7238005.0 1.0 0 0.0 1 Unmodified _YYYNGKAVY_ ENST00000563760.5_1_18:52921909-52988969:-|nuORF;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-6|TCF4 26.88365393820708 0.1891292719743517 3 [KG]NYAVYYY 9 7 + 33.267 0.0 0.0 2.9193 2.9193 70.815 0.0 0.0 0.0 3.613102926332566 4.7227989702779 3.613102926332566 2.486512420283237 0 0.3182503180159344 0.0 0.0 0.7742275032520141 [KG]NYAVYYY;[KG]NAYVYYY;[KG]NAVYYYY;[W{I|L}]AVYYYY;[W{I|L}]AYVYYY;YY[VP]{[YC]|[HE]}AVY;[YN]GKAVYYY;[W{I|L}]YAVYYY;[KG]GGYAVYYY;[KG]GGAVYYYY 2.9193;2.7011;2.7011;2.4393;2.4393;2.3731;2.3485;2.2848;2.1113;1.8931 -;-;-;-;-;-;-;-;-;- 172 1 1.602 47024.1 1.0 4481 5278 9760 HBL1_DMSO_200M_050219_1,9761 HBL1_DMSO_200M_050219_1,9761,YYYNGKAVY False True YYYNGKAVY 51.046501 570.771899402142 156561108.0 9760.0 ENST00000563760.5_1_18:52921909-52988969:-|nuORF;;nc|ENSG00000196628|P15884-2|TCF4;;nc|ENSG00000196628|P15884-6|TCF4 2.572998176018397 2.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 9762 51.048 24.0 2183200.0 25 0 218420.0 + 26367 NSYVSPRI 8 74 468.2507486560251 934.4869443788502 2 468.2509643435478 MULTI CID FTMS 0 0 0 9760 2882580.75 1.0 0 0.0 2 Unmodified _NSYVSPRI_ ENSG00000136536|ENST00000409175|MARCHF7;nc|ENSG00000136536|Q9H992-2|MARCHF7 41.8396318013385 0.2035142800366642 3 [NS]YVS 5 3 46.95 0.0 0.0 5.0242 0.0 0.0 0.0 381.2262056940063 381.2262056940063 35.53047929021788 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + [NS]YVS 5.0242 + + 167 + 1 1.602 44394.7 1.0 4482 5278 9760 HBL1_DMSO_200M_050219_1,9762 HBL1_DMSO_200M_050219_1,9762,NSYVSPRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9763 51.049 5.2 6770000.0 25 0 808430.0 + 4286 DAREIVNNV 9 69 515.2698641229689 1028.5251753127377 2 515.2701293826103 MULTI CID FTMS 0 0 0 9760 11045986.0 0.911517349053988 -1 0.0777702331542968 3 Unmodified _DAREIVNNV_ ENSG00000077097|ENST00000264331|TOP2B;nc|ENSG00000077097|Q02880-2|TOP2B 23.78978130925829 0.2284941198415988 3 [DV]N[KQ]VNNV 9 4 + 46.092 0.0 0.0 4.4814 4.4814 71.987 0.0 0.0 0.0 1.4787555240226524 14.973024840566469 1.4787555240226524 0.796896906561031 0 0.6421590589602533 0.0 0.0 0.3807196863200844 [DV]N[KQ]VNNV;[DV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VNNV;{[DA]|[EG]}{[RE]|[WV]}{I|L}VNNV;[DV][RV]DVNNV;[DN]V[KQ]VNNV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]DVNNV;{[NV]|[RG]}D[KQ]VNNV;{[NV]|[RG]}EE{I|L}VNNV;[DV]N[KQ]VGGNV;[DV]N[KQ]VNGGV 4.4814;4.4039;4.3376;4.1112;3.8344;3.8066;3.8018;3.7243;3.5861;3.5861 -;-;+;-;-;-;-;-;-;- + 235 1 1.602 33311.4 1.0 4483 5278 9760 HBL1_DMSO_200M_050219_1,9763 HBL1_DMSO_200M_050219_1,9763,DAREIVNNV False True DAREIVNNV 51.048858 515.27012938261 166621536.0 9760.0 nc|ENSG00000077097|Q02880-2|TOP2B;;ENSG00000077097|ENST00000264331|TOP2B 7.14895486831665 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9764 51.05 23.0 2194300.0 25 0 397880.0 + 14139 IAYKFGKTV 9 81 342.8710500758393 1025.591320827718 3 342.8708068728447 MULTI CID FTMS 0 0 0 9760 2227826.0 0.3233502515231523 -3 0.2552337646484375 4 Unmodified _IAYKFGKTV_ ENSG00000133872|ENST00000256255|SARAF 19.361941925380144 0.3125782356748823 3 {I|L}AYK{M(Oxidation (M))|F}GKTV 9 0 + 44.931 0.0 0.0 4.381 4.381 86.383 0.0 0.0 0.0 31.39879528452667 9.041068762088996 9.041068762088996 44.93078935780986 0 0.1989700043360188 1.154901959985743 0.0 0.0 + + {I|L}AYK{M(Oxidation (M))|F}GKTV 4.381 + + 94 + 1 1.602 50237.1 1.0 4484 5278 9760 HBL1_DMSO_200M_050219_1,9764 HBL1_DMSO_200M_050219_1,9764,IAYKFGKTV False True IAYKFGKTV 51.050037 342.870806872845 84198224.0 9760.0 ENSG00000133872|ENST00000256255|SARAF 5.997480074564616 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9765 51.051 16.0 1614300.0 25 0 144750.0 12149 GQLPRSVDV 9 58 485.7677648044928 969.5209766757856 2 485.7657043337822 MULTI CID FTMS 0 0 0 9760 2278227.25 0.4870934188548139 3 -0.2193984985351562 5 Unmodified _GQLPRSVDV_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 6.723162845929126 0.6799819581413107 3 {I|L} 1 8 14.604 0.0 0.0 1.5063 0.0 0.0 838.4258819265654 0.0 838.4258819265654 0.0 1.839883926472972 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5063 + + 22 + 1 1.602 26670.9 1.0 4485 5278 9760 HBL1_DMSO_200M_050219_1,9765 HBL1_DMSO_200M_050219_1,9765,GQLPRSVDV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9766 51.053 48.0 496800.0 25 0 41323.0 + 36448 SYYQSSVQY 9 50 562.7484639232616 1123.4823749133232 2 562.7488281130791 MULTI CID FTMS 0 0 0 9760 1076051.625 0.6725597985417529 2 -0.1624298095703125 6 Unmodified _SYYQSSVQY_ ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5 16.942295170755138 0.3780752226737986 3 GQY 3 7 20.278 0.0 0.0 1.8049 0.0 0.0 757.3288542607826 0.0 757.3288542607826 0.0 11.325768889002388 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 GQY 1.8049 - 53 + 1 1.602 26412.0 1.0 4486 5278 9760 HBL1_DMSO_200M_050219_1,9766 HBL1_DMSO_200M_050219_1,9766,SYYQSSVQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9767 51.054 66.0 630320.0 25 0 36950.0 + 24385 MFPEHAVKAY 10 78 398.1987997273793 1191.574569782338 3 398.1985656619072 MULTI CID FTMS 0 0 0 9760 822589.125 1.0 0 0.0 7 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 19.361941925380144 0.5226674314761524 3 M{M(Oxidation (M))|F}PEH{[VA]|[{I|L}G]}KAY 10 0 + 40.812 0.0 0.0 3.4251 3.4251 76.614 0.0 0.0 0.0 25.238956344972934 5.238956344972934 5.238956344972934 6.197887582883936 0 0.0 0.0 0.0 0.0 + + M{M(Oxidation (M))|F}PEH{[VA]|[{I|L}G]}KAY;M{M(Oxidation (M))|F}PEH[{I|L}A][KG]Y 3.4251;2.9049 +;- + 92 + 1 1.602 38310.2 1.0 4487 5278 9760 HBL1_DMSO_200M_050219_1,9767 HBL1_DMSO_200M_050219_1,9767,MFPEHAVKAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9768 51.056 78.0 503400.0 25 0 78815.0 + 4874 DGFEATKNI 9 71 497.7457500871187 0 497.7454711794853 PEAK CID FTMS 0 0 0 9760 752097.4375 0.4497132701892931 -3 0.2552337646484375 8 Unmodified _DGFEATKNI_ ENSG00000087191|ENST00000310144|PSMC5;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5 26.268140514670165 0.1442484609216422 3 EATK 4 5 21.274 0.0 0.0 2.1414 0.0 0.0 319.11862312169995 242.1145113580688 561.2331344797688 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 + EATK 2.1414 + + 65 + 1 1.602 38156.9 1.0 4488 5278 9760 HBL1_DMSO_200M_050219_1,9768 HBL1_DMSO_200M_050219_1,9768,DGFEATKNI False True DGFEATKNI 51.055903 497.745471179485 11868522.0 9760.0 nc|ENSG00000087191|P62195-2|PSMC5;;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;;ENSG00000087191|ENST00000310144|PSMC5 6.019889831542969 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9769 51.058 83.0 512010.0 25 0 40519.0 + 29823 QQIGKVVQV 9 88 499.8033698818864 997.5921868305728 2 499.8033019900322 MULTI CID FTMS 0 0 0 9760 719695.5 0.4067679212571055 -3 0.2552337646484375 9 Unmodified _QQLGKVVQV_ ENSG00000161970|ENST00000648839|RPL26;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;ENSG00000037241|ENST00000265100|RPL26L1 34.10243960390752 0.1078313939113124 3 QQ{I|L}[RK]VQV 8 2 QQ + + 15.397 5.5855 2.1808 1.5434 1.5434 48.552 0.0 0.0 0.0 0.0 -0.2861762465867006 -0.2861762465867006 0.0 0 0.2887254899964357 0.0 0.0 0.7059771852360797 QQ{I|L}[RK]VQV 1.5434 - 223 + 1 1.602 37780.5 1.0 4489 5278 9760 HBL1_DMSO_200M_050219_1,9769 HBL1_DMSO_200M_050219_1,9769,QQLGKVVQV True True QQIGKVVQV 51.057764 499.804 12001565.0 9760.0 ENSG00000161970|ENST00000648839|RPL26;;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;;ENSG00000037241|ENST00000265100|RPL26L1 5.929516474405925 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9770 51.06 130.0 364890.0 25 0 41135.0 + 21586 LPKNPEHFV 9 78 360.8660720050355 1079.5763866153063 3 360.8658630251884 MULTI CID FTMS 0 0 0 9760 509556.09375 0.3685393156338215 -3 0.2552337646484375 10 Unmodified _LPKNPEHFV_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 18.1463463914782 0.3454829746528889 3 {I|L}PKN[EP]H{M(Oxidation (M))|F}V 9 0 + 32.159 0.0 0.0 2.9789 2.9789 79.331 0.0 0.0 0.0 18.971548357545814 1.6718430890198626 1.6718430890198626 9.208187539523756 0 0.0 0.0 0.0 0.0 + + {I|L}PKN[EP]H{M(Oxidation (M))|F}V;{I|L}PKGG[EP]H{M(Oxidation (M))|F}V 2.9789;2.1259 +;- + 121 + 1 1.602 47468.9 1.0 4490 5278 9760 HBL1_DMSO_200M_050219_1,9770 HBL1_DMSO_200M_050219_1,9770,LPKNPEHFV False True LPKNPEHFV 51.060408 360.865863025188 24286898.0 9760.0 ENST00000379752.5_1_1:157029186-157029948:-|nuORF;;nc|ENSG00000122692|Q2TAY7-2|SMU1;;ENSG00000122692|ENST00000397149|SMU1 7.342430114746094 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9771 51.071 611.0 223110.0 25 0 20719.0 + 44882 YPPMFPYGVV 10 128 585.2878291832095 1168.561105433219 2 585.2880126833916 MULTI CID FTMS 0 0 0 9760 325826.9375 1.0 0 0.0 11 Unmodified _YPPMFPYGVV_ REV__ENSG00000171298|ENST00000302262|GAA 32.116972079565 0.2470863257317063 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA{[{M(Oxidation (M))|F}D]|MM}VPYV 10 -1 + 65.372 0.0 0.0 5.5942 5.5942 78.168 0.0 0.0 0.0 15.925230508543038 14.146518864155126 14.146518864155126 2.251897400058517 0 1.0994850021680094 2.0 1.055462187404089 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA{[{M(Oxidation (M))|F}D]|MM}VPYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NP]CYSKVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NP]CSYKVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NP]CSKVYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NP]CSKYVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA{[{M(Oxidation (M))|F}D]|MM}PVYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SKVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA{[{M(Oxidation (M))|F}D]|MM}PYVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAH[HS]PYV;[VP]YA{[{M(Oxidation (M))|F}D]|MM}VPYV 5.5942;5.4015;5.4015;5.1608;5.1232;5.0583;5.0413;5.0206;4.7776;4.2314 -;-;-;-;-;-;-;-;-;- 1157 1 1.602 107272.6 1.0 4491 5278 9760 HBL1_DMSO_200M_050219_1,9771 HBL1_DMSO_200M_050219_1,9771,YPPMFPYGVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9772 51.074 143.0 203580.0 25 0 13212.0 36451 SYYSFDQW 8 71 548.2257941971527 1094.437035461105 2 548.2266723513603 MULTI CID FTMS 0 0 0 9760 328682.0625 0.9317816965387166 -3 0.2552337646484375 12 Unmodified _SYYSFDQW_ ENST00000332118.10_1_11:126133397-126133748:-|nuORF 8.593279151180031 0.7721714526254883 3 T{M(Oxidation (M))|F}DD 4 6 16.198 0.0 0.0 1.48 0.0 0.0 598.271776267775 0.0 598.271776267775 0.0 11.593793813122062 0.0 0.0 0 0.0 0.0 0.0 0.0 T{M(Oxidation (M))|F}DD 1.48 - 51 1 1.602 30503.4 1.0 4492 5278 9760 HBL1_DMSO_200M_050219_1,9772 HBL1_DMSO_200M_050219_1,9772,SYYSFDQW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9773 51.079 269.0 177880.0 25 0 10788.0 + 24848 MPLSQIKKV 9 91 348.54757738401827 1042.6209027522548 3 348.5474731326103 MULTI CID FTMS 0 0 0 9760 156541.96875 1.0 0 0.0 13 Unmodified _MPLSQIKKV_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 5.296884461304476 0.7297726132274777 3 MP{I|L} 3 6 26.198 0.0 0.0 2.5127 0.0 0.0 0.0 698.4215882041239 698.4215882041239 19.20818753952375 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + MP{I|L} 2.5127 + + 28 + 1 1.602 45877.7 1.0 4493 5278 9760 HBL1_DMSO_200M_050219_1,9773 HBL1_DMSO_200M_050219_1,9773,MPLSQIKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9774 51.09 614.0 220060.0 25 0 18055.0 37218 TIKAAGAV 8 175 365.72569651416535 729.4368400951307 2 365.7260925173759 MULTI CID FTMS 0 0 0 9760 145578.828125 1.0 0 0.0 14 Unmodified _TIKAAGAV_ ENST00000223369.2_1_7:44252755-44252812:+|nuORF 5.760428011301431 0.7893668129297577 3 {[QN]|[E{I|L}]|[KN]}{I|L}RTV 6 6 + 42.007 0.0 0.0 5.7589 5.7589 82.644 0.0 0.0 0.0 23.46787486224656 4.929155219028942 4.929155219028942 4.929155219028942 0 0.1861818737241735 1.6989700043360187 0.1271595765414318 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}RTV;{[QN]|[E{I|L}]|[KN]}{I|L}RS{I|L} 5.7589;5.0831 -;- 79 + 1 1.602 107463.6 1.0 4494 5278 9760 HBL1_DMSO_200M_050219_1,9774 HBL1_DMSO_200M_050219_1,9774,TIKAAGAV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9775 51.103 800.0 322430.0 25 0 39246.0 + 37035 TGAPSGLKP 9 232 414.2347253143582 0 414.2346984744072 PEAK CID FTMS 0 0 0 9760 125324.4609375 0.5358748681903703 -8 0.5533027648925781 15 Unmodified _TGAPSGLKP_ REV__ENST00000494295.1_1_X:134477728-134477890:-|nuORF 10.073929032068715 0.3114232490637051 3 P 1 -1 4.6041 0.0 0.0 0.55709 0.0 0.0 98.01058630322764 628.3710421197874 726.3816284230151 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.55709 + + 65 + 1 1.602 196524.6 0.6299999952316284 4495 5278 9760 HBL1_DMSO_200M_050219_1,9775 HBL1_DMSO_200M_050219_1,9775,TGAPSGLKP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9776 51.117 800.0 279770.0 25 0 13777.0 8769 EVSVLRNKV 9 238 522.3144769444892 1042.6144009557784 2 522.3193847537041 MULTI CID FTMS 0 0 0 9760 111528.6953125 0.2461864371412443 6 -0.41455078125 16 Unmodified _EVSVLRNKV_ ENST00000340026.10_3_6:111922490-111927217:-|nuORF;ENST00000368761.9_1_6:111913293-111927217:-|nuORF 7.910154910731844 0.6385446671287552 3 MP{I|L} 3 8 29.737 0.0 0.0 2.8521 0.0 0.0 0.0 698.4208395048062 698.4208395048062 11.007885305533303 0.0 0.0 0.0 0 0.3494850021680094 0.8538719643217619 0.0 0.0 MP{I|L} 2.8521 - 1686 + 1 1.602 177660.1 0.8199999928474426 4496 5278 9760 HBL1_DMSO_200M_050219_1,9776 HBL1_DMSO_200M_050219_1,9776,EVSVLRNKV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9777 51.133 800.0 145700.0 25 0 20296.0 -1 0 55 1130.7738677214866 3389.29977376466 3 1131.441332995892 MULTI CID FTMS 0 0 0 9760 119970.6015625 0.9151195608256688 -2 0.1488380432128906 17 3 {I|L}AR 3 -1 10.802 0.0 0.0 0.31871 0.0 0.0 2348.93205023126 697.1355684869749 3046.067618718235 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AR 0.31871 - 57 + 1 1.602 90098.9 0.6800000071525574 4497 5278 9760 HBL1_DMSO_200M_050219_1,9777 HBL1_DMSO_200M_050219_1,9777, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9778 51.146 800.0 171060.0 25 0 40160.0 -1 0 89 966.4326234561798 1930.85069397916 2 966.4281494021416 MULTI CID FTMS 0 0 0 9760 111965.7578125 0.0589138580738905 16 -1.4487953186035156 18 3 {[QN]|[E{I|L}]|[KN]}T{I|L}GS{M(Oxidation (M))|F}E 8 -1 20.413 0.0 0.0 1.0572 0.0 0.0 0.0 1051.459616668866 1051.459616668866 10.44209797817093 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.3494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}T{I|L}GS{M(Oxidation (M))|F}E 1.0572 - 850 1 1.602 95326.8 0.7599999904632568 4498 5278 9760 HBL1_DMSO_200M_050219_1,9778 HBL1_DMSO_200M_050219_1,9778, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9779 51.161 800.0 132320.0 25 0 6374.6 14191 IDHNHKDAQT 10 152 589.7797418642156 0 589.7787963747978 PEAK CID FTMS 0 0 0 9760 104422.9609375 1.0 0 0.0 19 Unmodified _IDHNHKDAQT_ ENSG00000111670|ENST00000299314|GNPTAB 10.073929032068715 0.3742530088597855 3 D 1 9 8.4949 0.0 0.0 0.7214 0.0 0.0 828.5045388047998 230.99041162662343 1059.4949504314234 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 + D 0.7214 + + 82 + 1 1.602 82156.9 0.9399999976158142 4499 5278 9760 HBL1_DMSO_200M_050219_1,9779 HBL1_DMSO_200M_050219_1,9779,IDHNHKDAQT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9781 51.166 4.5 5540200.0 25 0 829050.0 + 25122 MQDDNQVMV 9 54 540.2282424501385 1078.441931967077 2 540.2288696169853 MULTI CID FTMS 0 0 0 9780 12129909.0 1.0 0 0.0 1 Unmodified _MQDDNQVMV_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 24.020572477871973 0.2255576514309169 3 QN 2 7 15.701 0.0 0.0 1.4559 0.0 0.0 347.1878558946144 486.1302279108032 833.3180838054176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 QN 1.4559 - 36 + 1 1.602 27069.7 1.0 4500 5279 9780 HBL1_DMSO_200M_050219_1,9781 HBL1_DMSO_200M_050219_1,9781,MQDDNQVMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9782 51.167 36.0 858400.0 25 0 113500.0 + 4906 DGKSLVSV 8 56 402.72768255464905 803.4408121760981 2 402.7266418337822 MULTI CID FTMS 0 0 0 9780 1070619.25 0.2472260310982864 3 -0.1954269409179687 2 Unmodified _DGKSLVSV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P 26.88365393820708 0.4786498634179528 3 [VS]NVTVSV 8 5 + 49.034 0.0 0.0 6.103 6.103 88.555 0.0 0.0 0.0 14.648867983026506 32.044190852930825 14.648867983026506 9.262137858390808 0 0.8182503180159344 1.3979400086720375 0.9247425010840048 0.0 [VS]NVTVSV;[VS]GGVTVSV;[KG]DVTVSV;[VS][KS][TP]SV;{[TV]|[{I|L}S]}[QA]TVSV 6.103;4.9502;3.9247;2.1229;2.073 -;-;-;-;- 84 1 1.602 29430.8 1.0 4501 5279 9780 HBL1_DMSO_200M_050219_1,9782 HBL1_DMSO_200M_050219_1,9782,DGKSLVSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9783 51.168 16.0 1587600.0 25 0 179540.0 + 4422 DAVTLEPTA 9 57 458.7347313014616 915.4549096697232 2 458.7350036501884 MULTI CID FTMS 0 0 0 9780 2737420.25 0.743321856200028 1 -0.0431671142578125 3 Unmodified _DAVTLEPTA_ REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-5|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN 12.531546534597751 0.4974689918368763 3 PTA 3 -1 15.974 0.0 0.0 1.7449 0.0 0.0 628.306540437162 0.0 628.306540437162 0.0 -1.4735426686651485 -1.4735426686651485 0.0 0 0.0 0.0 0.4247425010840047 0.0 PTA 1.7449 + + 25 + 1 1.602 26354.2 1.0 4502 5279 9780 HBL1_DMSO_200M_050219_1,9783 HBL1_DMSO_200M_050219_1,9783,DAVTLEPTA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9784 51.169 19.0 1852500.0 25 0 173610.0 + 28841 QAFINQHTV 9 78 529.274793448068 1056.5350339629358 2 529.2742187380791 MULTI CID FTMS 0 0 0 9780 2584278.75 1.0 0 0.0 4 Unmodified _QAFINQHTV_ ENSG00000144161|ENST00000409573|ZC3H8 65.23502041540118 0.0231836506122253 3 [QA]{M(Oxidation (M))|F}{I|L}SN 6 5 52.682 0.0 0.0 4.9863 0.0 0.0 0.0 393.17930017642817 393.17930017642817 39.91816227240019 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.3494850021680094 0.4247425010840047 [QA]{M(Oxidation (M))|F}{I|L}SN 4.9863 - 151 + 1 1.602 34445.3 1.0 4503 5279 9780 HBL1_DMSO_200M_050219_1,9784 HBL1_DMSO_200M_050219_1,9784,QAFINQHTV True True QAFINQHTV 51.169301 529.274218738079 19100342.0 9780.0 ENSG00000144161|ENST00000409573|ZC3H8 7.965713818868001 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9785 51.17 20.0 1907500.0 25 0 295610.0 + 4880 DGFQPSRSI 9 59 503.75064442064826 1005.4867359080964 2 503.7505065798759 MULTI CID FTMS 0 0 0 9780 1738876.0 0.7586340036677923 -2 0.1970329284667968 5 Unmodified _DGFQPSRSI_ ENSG00000072274|ENST00000360110|TFRC;ENST00000464368.1_1_3:195789435-195792419:-|nuORF 18.1463463914782 0.3454829746528889 3 Q{I|L}{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6 8 21.458 0.0 0.0 2.134 0.0 0.0 319.1139464567278 0.0 319.1139464567278 0.0 12.165762445130497 0.0 0.0 0 0.4247425010840047 0.0 0.7059771852360797 0.5 Q{I|L}{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.134 - 27 + 1 1.602 36075.8 1.0 4504 5279 9780 HBL1_DMSO_200M_050219_1,9785 HBL1_DMSO_200M_050219_1,9785,DGFQPSRSI False True DGFQPSRSI 51.170478 503.750506579876 18453328.0 9780.0 ENST00000464368.1_1_3:195789435-195792419:-|nuORF;;ENSG00000072274|ENST00000360110|TFRC 4.871527036031087 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9786 51.172 31.0 1005000.0 25 0 142370.0 + 43051 VYHAVSVM 8 61 453.2312344728527 904.4479160125054 2 453.2314025759697 MULTI CID FTMS 0 0 0 9780 1346761.0 1.0 0 0.0 6 Unmodified _VYHAVSVM_ nc|ENSG00000258289|Q8WUH1-3|CHURC1 17.086550045450526 0.6584923310065985 3 VYQVM 5 4 24.157 0.0 0.0 2.6709 0.0 0.0 266.13066855332414 0.0 266.13066855332414 0.0 11.22486274231747 0.0 0.0 0 0.0 0.0 0.0 0.0 VYQVM 2.6709 - 110 + 1 1.602 32556.0 1.0 4505 5279 9780 HBL1_DMSO_200M_050219_1,9786 HBL1_DMSO_200M_050219_1,9786,VYHAVSVM False True VYHAVSVM 51.171657 453.23140257597 9217189.0 9780.0 nc|ENSG00000258289|Q8WUH1-3|CHURC1 3.201064109802246 2.0 True 8.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 9787 51.173 44.0 739610.0 25 0 115540.0 25129 MQDEERYM 8 66 551.2192759852717 1100.4239990373433 2 551.2197143435478 MULTI CID FTMS 0 0 0 9780 987236.4375 1.0 0 0.0 7 Unmodified _MQDEERYM_ ENSG00000150045|ENST00000617889|KLRF1;nc|ENSG00000150045|Q9NZS2-2|KLRF1;nc|ENSG00000150045|Q9NZS2-3|KLRF1;nc|ENSG00000150045|Q9NZS2-4|KLRF1 20.453626601364224 0.6087503291685402 3 MQDD 4 5 33.404 0.0 0.0 3.0356 0.0 0.0 0.0 608.2511080377561 608.2511080377561 6.977437731477423 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.5 MQDD 3.0356 - 29 + 1 1.602 29581.6 1.0 4506 5279 9780 HBL1_DMSO_200M_050219_1,9787 HBL1_DMSO_200M_050219_1,9787,MQDEERYM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9788 51.174 49.0 733050.0 25 0 54292.0 + 44803 YPNGHFVRV 9 64 544.784972079078 1087.555391224956 2 544.7849609255791 MULTI CID FTMS 0 0 0 9780 962792.8125 1.0 0 0.0 8 Unmodified _YPNGHFVRV_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 37.97399986684836 0.0865783450051559 3 YPNGH{M(Oxidation (M))|F}V[RV] 9 0 + 69.268 0.0 0.0 6.3691 6.3691 88.963 0.0 0.0 0.0 43.06962701565345 7.024597658517052 7.024597658517052 9.208187539523747 0 0.3807196863200844 1.6989700043360187 0.0 0.2887254899964357 + + YPNGH{M(Oxidation (M))|F}V[RV];YPGGGH{M(Oxidation (M))|F}V[RV];[NP]G[KG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{[QN]|[E{I|L}]|[KN]} 6.3691;5.5224;0.1995 +;-;- + 80 + 1 1.602 33915.7 1.0 4507 5279 9780 HBL1_DMSO_200M_050219_1,9788 HBL1_DMSO_200M_050219_1,9788,YPNGHFVRV True True YPNGHFVRV 51.174203 544.784960925579 53712421.0 9780.0 ENST00000564909.5_1_15:66585934-66618751:+|nuORF;;nc|ENSG00000166938|Q8TF46-2|DIS3L;;nc|ENSG00000166938|Q8TF46-3|DIS3L;;nc|ENSG00000166938|Q8TF46-4|DIS3L;;ENSG00000166938|ENST00000319212|DIS3L 9.817493438720703 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9789 51.176 71.0 718000.0 25 0 50784.0 + -1 DALGRPMFAK 10 70 561.2938538034821 1120.573154673764 2 561.2939941287041 MULTI CID FTMS 0 0 0 9780 949615.9375 0.4759394254954732 -2 0.1970329284667968 9 Oxidation (M) _DALGRPM(Oxidation (M))FAK_ REV__ENSG00000185753|ENST00000327877|CXorf38 13.042465956692816 0.6287021003332052 3 DA{I|L} 3 -1 47.664 0.0 0.0 4.2535 0.0 0.0 0.0 818.4025407443022 818.4025407443022 25.445312593723983 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 DA{I|L} 4.2535 + + 27 + 1 1.602 41529.0 1.0 4508 5279 9780 HBL1_DMSO_200M_050219_1,9789 HBL1_DMSO_200M_050219_1,9789,DALGRPMFAK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9790 51.177 68.0 665420.0 25 0 81045.0 + 5760 DPPDGIKV 8 80 420.7266170421713 839.4386811511426 2 420.7264587283134 MULTI CID FTMS 0 0 0 9780 813587.9375 0.308976638327248 12 -1.0172576904296875 10 Unmodified _DPPDGIKV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 14.838274106304384 0.6917062315640577 3 DP 2 6 44.776 0.0 0.0 5.3341 0.0 0.0 0.0 624.3369631580838 624.3369631580838 13.349621957594096 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + DP 5.3341 + + 85 + 1 1.602 46077.9 1.0 4509 5279 9780 HBL1_DMSO_200M_050219_1,9790 HBL1_DMSO_200M_050219_1,9790,DPPDGIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9791 51.179 77.0 475800.0 25 0 43999.0 + 15514 IPVGKSPMV 9 65 464.2698925080886 926.5252320829773 2 464.2699157595634 MULTI CID FTMS 0 0 0 9780 709033.625 0.6258097657219248 1 -0.0431671142578125 11 Unmodified _IPVGKSPMV_ ENSG00000149657|ENST00000279068|LSM14B;nc|ENSG00000149657|Q9BX40-3|LSM14B 22.736283301280096 0.2418982879461534 3 {I|L}PV 3 6 41.911 0.0 0.0 4.5235 0.0 0.0 0.0 614.29792172157 614.29792172157 22.24546265559709 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + {I|L}PV 4.5235 + + 15 + 1 1.602 33221.3 1.0 4510 5279 9780 HBL1_DMSO_200M_050219_1,9791 HBL1_DMSO_200M_050219_1,9791,IPVGKSPMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9792 51.181 88.0 404880.0 25 0 35749.0 + 4366 DATTIAKI 8 75 416.74242080731614 831.4702886814323 2 416.7422057986259 MULTI CID FTMS 0 0 0 9780 717233.25 0.4233970950207766 1 -0.0431671142578125 12 Unmodified _DATTIAKI_ ENSG00000105851|ENST00000496166|PIK3CG 25.399314129420983 0.5099049743284904 3 {[DA]|[EG]}TT{I|L}AK{I|L} 8 0 + 63.353 0.0 0.0 7.6193 7.6193 87.826 0.0 0.0 0.0 57.590773694363264 11.8943306386236 11.8943306386236 4.771212547196626 0 0.4247425010840047 2.0 0.0 0.0 + + {[DA]|[EG]}TT{I|L}AK{I|L};{[DA]|[EG]}T{I|L}TAK{I|L} 7.6193;7.0455 +;- + 63 + 1 1.602 33861.2 1.0 4511 5279 9780 HBL1_DMSO_200M_050219_1,9792 HBL1_DMSO_200M_050219_1,9792,DATTIAKI False True DATTIAKI 51.181213 416.742205798626 17458232.0 9780.0 ENSG00000105851|ENST00000496166|PIK3CG;;PIK3CG|p.T895A|1|0.42|ENSG00000105851|chr7:106883086-106883086|A/G|missense_variant 5.578187147776286 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9793 51.183 72.0 595810.0 25 0 36494.0 + 31605 RQVPKLLSA 9 95 506.31907574208986 1010.6235985509798 2 506.3188964724541 MULTI CID FTMS 0 0 0 9780 704274.9375 0.4619267451444273 1 -0.0431671142578125 13 Unmodified _RQVPKLLSA_ ENSG00000070785|ENST00000360403|EIF2B3;nc|ENSG00000070785|Q9NR50-2|EIF2B3;nc|ENSG00000070785|Q9NR50-3|EIF2B3 10.073929032068715 0.563993802247229 3 {I|L}{I|L}{[SA]|[TG]} 4 5 17.435 0.0 0.0 1.7252 0.0 0.0 608.3757246519463 0.0 608.3757246519463 0.0 -0.0392374713162979 -0.0392374713162979 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}{I|L}{[SA]|[TG]} 1.7252 + + 83 1 1.602 38438.9 1.0 4512 5279 9780 HBL1_DMSO_200M_050219_1,9793 HBL1_DMSO_200M_050219_1,9793,RQVPKLLSA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9794 51.185 68.0 361960.0 25 0 29071.0 39014 TVSHLLNVV 9 55 491.2911931750197 980.5678334168394 2 492.2981750369072 MULTI CID FTMS 0 0 0 9780 681335.4375 0.4692818228098673 -8 0.5709342956542969 14 Unmodified _TVSHLLNVV_ ENSG00000143178|ENST00000367821|TBX19 8.593279151180031 0.6146971463335029 3 V 1 8 13.099 0.0 0.0 1.3359 0.0 0.0 863.4884552203536 0.0 863.4884552203536 0.0 -1.593793813122062 -1.593793813122062 0.0 0 0.0 0.0 0.0 0.0 + V 1.3359 + + 22 + 1 1.602 27091.0 1.0 4513 5279 9780 HBL1_DMSO_200M_050219_1,9794 HBL1_DMSO_200M_050219_1,9794,TVSHLLNVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9795 51.186 61.0 517240.0 25 0 75943.0 + 20166 LKQKIEQEL 9 75 376.892311600315 1127.655105401145 3 376.8919860720634 MULTI CID FTMS 0 0 0 9780 490734.25 0.6545615576464072 -2 0.1970329284667968 15 Unmodified _LKQKIEQEL_ ENSG00000127054|ENST00000435064|INTS11;ENST00000461514.6_1_1:1248044-1249114:-|nuORF;ENST00000470030.6_1_1:1247241-1248711:-|nuORF;ENST00000478641.5_1_1:1248044-1248711:-|nuORF;ENST00000485710.5_1_1:1247522-1249186:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 7.910154910731844 0.6385446671287552 3 {I|L} 1 8 12.764 0.0 0.0 1.1319 0.0 0.0 996.5601937573934 0.0 996.5601937573934 0.0 -0.423377782955221 -0.423377782955221 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1319 + + 41 + 1 1.602 33864.0 1.0 4514 5279 9780 HBL1_DMSO_200M_050219_1,9795 HBL1_DMSO_200M_050219_1,9795,LKQKIEQEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9796 51.189 165.0 184940.0 25 0 23886.0 + 40087 VGHVMGSAL 9 61 435.72884354134 869.44313414948 2 435.7288085818291 MULTI CID FTMS 0 0 0 9780 387752.59375 0.3898636812173117 1 -0.0431671142578125 16 Unmodified _VGHVMGSAL_ ENSG00000250479|ENST00000484558|CHCHD10;ENST00000440505.1_1_7:38351154-38351196:+|nuORF 9.347437153973935 0.588369872918737 3 A{I|L} 2 7 15.573 0.0 0.0 1.7912 0.0 0.0 667.3108537313144 0.0 667.3108537313144 0.0 5.194590330151847 0.0 0.0 0 0.0 0.0 0.0 0.0 + A{I|L} 1.7912 + + 16 + 1 1.602 31355.3 1.0 4515 5279 9780 HBL1_DMSO_200M_050219_1,9796 HBL1_DMSO_200M_050219_1,9796,VGHVMGSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9797 51.193 208.0 354330.0 25 0 40757.0 + 38862 TVISEDSVVKA 11 90 574.3134592585188 1146.6123655838376 2 574.3130370974541 MULTI CID FTMS 0 0 0 9780 340907.90625 0.2008793386338165 -3 0.2681007385253906 17 Unmodified _TVISEDSVVKA_ ENSG00000102384|ENST00000682095|CENPI;nc|ENSG00000102384|Q92674-2|CENPI 19.62595529434964 0.626904505265593 3 {[TV]|[{I|L}S]}{I|L}S 4 7 44.693 0.0 0.0 3.8978 0.0 0.0 0.0 743.3557222955686 743.3557222955686 33.43367773959503 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + {[TV]|[{I|L}S]}{I|L}S 3.8978 + + 37 + 1 1.602 63316.6 1.0 4516 5279 9780 HBL1_DMSO_200M_050219_1,9797 HBL1_DMSO_200M_050219_1,9797,TVISEDSVVKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9798 51.197 223.0 389230.0 25 0 22610.0 + 29831 QQLKKLEEL 9 123 564.8353857740003 1127.6562186148003 2 564.8368408083916 MULTI CID FTMS 0 0 0 9780 338061.71875 0.753203349639084 -2 0.1970329284667968 18 Unmodified _QQLKKLEEL_ ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1 18.1463463914782 0.3454829746528889 3 {[QN]|[E{I|L}]|[KN]}EKK{I|L} 6 5 28.207 0.0 0.0 2.5014 0.0 0.0 0.0 384.1973922810693 384.1973922810693 10.706014842078837 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.2887254899964357 0.0 {[QN]|[E{I|L}]|[KN]}EKK{I|L} 2.5014 - 408 1 1.602 69006.9 1.0 4517 5279 9780 HBL1_DMSO_200M_050219_1,9798 HBL1_DMSO_200M_050219_1,9798,QQLKKLEEL False True QQLKKLEEL 51.197436 564.836840808392 2491558.0 9780.0 nc|ENSG00000115415|P42224-2|STAT1;;ENSG00000115415|ENST00000361099|STAT1 1.667466362317403 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9799 51.202 218.0 693350.0 25 0 100330.0 + 24225 MALGSDPRV 9 149 473.24500517596135 944.4754574187228 2 473.2443420290947 MULTI CID FTMS 0 0 0 9780 297014.84375 0.220767532999659 -3 0.2681007385253906 19 Unmodified _MALGSDPRV_ ENSG00000150977|ENST00000280571|RILPL2 34.40172386719151 0.1061884637610825 3 MA{I|L}GTVDDG 9 5 55.716 0.0 0.0 5.8992 0.0 0.0 0.0 82.06697260074452 82.06697260074452 36.478523728074975 0.0 0.0 0.0 0 1.1435078169319297 1.6989700043360187 0.25 0.0 MA{I|L}GTVDDG 5.8992 - 783 + 1 1.602 120230.3 1.0 4518 5279 9780 HBL1_DMSO_200M_050219_1,9799 HBL1_DMSO_200M_050219_1,9799,MALGSDPRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9800 51.205 163.0 853240.0 25 0 100850.0 -1 0 146 368.1638993472495 367.1566228806496 1 368.1631347537041 MULTI CID FTMS 0 0 0 9780 206293.640625 0.0942903730812111 -3 0.2681007385253906 20 3 {M(Oxidation (M))|F}AM 3 -1 + 30.903 0.0 0.0 8.4168 8.4168 91.623 0.0 0.0 0.0 9.648415687162952 7.257724967479859 7.257724967479859 7.257724967479859 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}AM;{M(Oxidation (M))|F}CV;{[MS]|[{M(Oxidation (M))|F}A]}M;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F} 8.4168;6.4401;5.7889;4.7759 -;-;-;- 37 + 1 1.602 115409.1 1.0 4519 5279 9780 HBL1_DMSO_200M_050219_1,9800 HBL1_DMSO_200M_050219_1,9800, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9802 51.209 18.0 1229900.0 25 0 94346.0 + 39197 TYQQVQQTL 9 56 554.785135672662 1107.555718412124 2 554.7853881716728 MULTI CID FTMS 0 0 0 9801 1621858.75 0.7575556054304933 2 -0.1522598266601562 1 Unmodified _TYQQVQQTL_ ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42 17.11289562659939 0.3734572693229295 3 [YT]QQV 5 4 30.177 0.0 0.0 2.7247 0.0 0.0 0.0 485.2383715705802 485.2383715705802 9.710244364333334 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [YT]QQV 2.7247 + + 126 1 1.605 22769.0 1.0 4520 5280 9801 HBL1_DMSO_200M_050219_1,9802 HBL1_DMSO_200M_050219_1,9802,TYQQVQQTL False True TYQQVQQTL 51.208932 554.785388171673 34942444.0 9801.0 ENSG00000126254|ENST00000262633|RBM42;;nc|ENSG00000126254|Q9BTD8-2|RBM42;;nc|ENSG00000126254|Q9BTD8-3|RBM42;;nc|ENSG00000126254|Q9BTD8-4|RBM42 6.878225167592366 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9803 51.211 88.0 825380.0 25 0 35417.0 + 29250 QGYRMPRV 8 113 336.17999758999485 1005.5181633701844 3 336.1799194216728 MULTI CID FTMS 0 0 0 9801 372330.96875 0.6203461249294504 -4 0.3112678527832031 2 Unmodified _QGYRMPRV_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 6.2057823575117 0.7866635192979977 3 QV 2 6 16.198 0.0 0.0 1.6109 0.0 0.0 0.0 775.3701223225937 775.3701223225937 1.8007572389131887 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QV 1.6109 - 53 + 1 1.605 62726.6 1.0 4521 5280 9801 HBL1_DMSO_200M_050219_1,9803 HBL1_DMSO_200M_050219_1,9803,QGYRMPRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9804 51.212 15.0 1931400.0 25 0 289630.0 + 12412 GTITTFEHA 9 71 488.7403848540344 975.4662167748688 2 488.7403442263603 MULTI CID FTMS 0 0 0 9801 1407517.875 0.1350005610964496 -2 0.1624298095703125 3 Unmodified _GTITTFEHA_ ENSG00000167658|ENST00000309311|EEF2 25.399314129420983 0.2080152500878129 3 [TA]VTT{M(Oxidation (M))|F}E[HA] 9 2 [TA]V + + 28.901 15.784 5.8211 2.9628 2.9628 50.148 0.0 0.0 0.0 0.0 10.731264980947476 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 [TA]VTT{M(Oxidation (M))|F}E[HA] 2.9628 - 138 + 1 1.605 29413.1 1.0 4522 5280 9801 HBL1_DMSO_200M_050219_1,9804 HBL1_DMSO_200M_050219_1,9804,GTITTFEHA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9805 51.214 86.0 504840.0 25 0 76998.0 -1 TFECGACRC 9 84 552.2064866011625 1102.398420269125 2 552.2068359255791 MULTI CID FTMS 0 0 0 9801 845163.125 1.0 0 0.0 4 2 Carbamidomethyl (C) _TFEC(Carbamidomethyl (C))GAC(Carbamidomethyl (C))RC_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 7.289230182591677 0.6602208344931196 3 QV{[ET]|[MV]} 4 -1 27.747 0.0 0.0 2.517 0.0 0.0 627.1537325219529 0.0 627.1537325219529 0.0 10.563273204314658 0.0 0.0 0 0.5 0.0 0.0 0.805462187404089 QV{[ET]|[MV]} 2.517 - 57 1 1.605 42748.6 1.0 4523 5280 9801 HBL1_DMSO_200M_050219_1,9805 HBL1_DMSO_200M_050219_1,9805,TFECGACRC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9806 51.215 30.0 880310.0 25 0 107330.0 4502 DAYKDQISV 9 49 519.7585020163908 1037.5024510995815 2 519.7588378787041 MULTI CID FTMS 0 0 0 9801 519143.65625 0.9428834214109484 2 -0.1522598266601562 5 Unmodified _DAYKDQISV_ ENSG00000008294|ENST00000262013|SPAG9;nc|ENSG00000008294|O60271-2|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-9|SPAG9 11.640296217721598 0.521594087909532 3 V 1 8 11.594 0.0 0.0 1.1175 0.0 0.0 920.4230652737012 0.0 920.4230652737012 0.0 11.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1175 + + 8 + 1 1.605 24408.5 1.0 4524 5280 9801 HBL1_DMSO_200M_050219_1,9806 HBL1_DMSO_200M_050219_1,9806,DAYKDQISV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9807 51.222 380.0 316160.0 25 0 24624.0 + -1 CMEMACGGMPA 11 173 566.6846394501464 1131.3547259670927 2 566.6851074099541 MULTI CID FTMS 0 0 0 9801 511223.75 1.0 0 0.0 6 2 Oxidation (M) _CM(Oxidation (M))EM(Oxidation (M))ACGGMPA_ REV__ENST00000351989.7_1_22:20098681-20098984:+|nuORF 5.731851221503515 0.8481046878870278 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D 3 -1 12.581 0.0 0.0 1.112 0.0 0.0 0.0 754.2053478755489 754.2053478755489 0.3625324412936752 0.0 0.0 0.0 0 0.0 0.5376020021010439 0.0 0.3252574989159953 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D 1.112 - 345 1 1.605 93009.0 1.0 4525 5280 9801 HBL1_DMSO_200M_050219_1,9807 HBL1_DMSO_200M_050219_1,9807,CMEMACGGMPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9808 51.225 127.0 291370.0 25 0 17470.0 + 18521 KYQEYTNEL 9 87 594.2824494597628 1186.5503459863255 2 594.7834960818291 MULTI CID FTMS 0 0 0 9801 389772.65625 0.4460468144553109 -2 0.1624298095703125 7 Unmodified _KYQEYTNEL_ ENSG00000183735|ENST00000331710|TBK1;ENST00000545392.1_1_12:64890804-64891535:+|nuORF 24.020572477871973 0.2255576514309169 3 E{[ES]|[DT]|[{I|L}C]}YEKC(Carbamidomethyl (C)){I|L} 8 6 40.571 0.0 0.0 3.4192 0.0 0.0 130.094365616988 0.0 130.094365616988 0.0 28.571479741241266 0.0 0.0 0 0.0 0.0 0.4247425010840047 1.1989700043360187 E{[ES]|[DT]|[{I|L}C]}YEKC(Carbamidomethyl (C)){I|L} 3.4192 - 178 + 1 1.605 35850.1 1.0 4526 5280 9801 HBL1_DMSO_200M_050219_1,9808 HBL1_DMSO_200M_050219_1,9808,KYQEYTNEL False True KYQEYTNEL 51.224631 594.2825 6941208.0 9801.0 ENST00000545392.1_1_12:64890804-64891535:+|nuORF;;ENSG00000183735|ENST00000331710|TBK1 5.3187103271484375 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9809 51.229 208.0 515400.0 25 0 30764.0 + + 9055 RYTGDTISM 9 148 522.2457893082088 1042.4770256832176 2 522.2447997927666 MULTI CID FTMS 0 0 0 9801 184901.421875 0.7483978656253668 -1 0.0431671142578125 8 Unmodified _FEQAFALSM_ ENSG00000164609|ENST00000297151|SLU7;ENST00000520841.1_1_5:159833399-159835410:-|nuORF 26.268140514670165 0.1969607489560049 3 T{I|L}SM 4 -1 37.384 0.0 0.0 3.586 0.0 0.0 592.2606830923086 0.0 592.2606830923086 0.0 14.0827567690733 0.0 0.0 0 0.8494850021680094 0.0 0.7742275032520141 0.0 T{I|L}SM 3.586 - 1467 1 1.605 84409.6 1.0 4527 5280 9801 HBL1_DMSO_200M_050219_1,9809 HBL1_DMSO_200M_050219_1,9809,FEQAFALSM False False RYTGDTISM 51.228602 522.244799792767 2670810.0 9801.0 ENSG00000164609|ENST00000297151|SLU7;;ENST00000520841.1_1_5:159833399-159835410:-|nuORF 3.963529189427694 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9810 51.239 610.0 155310.0 25 0 15354.0 + 45184 YQRDKPLKL 9 133 580.8433138600246 1159.6720747868492 2 581.2429077029228 MULTI CID FTMS 0 0 0 -1 0 9 Unmodified _YQRDKPLKL_ REV__ENSG00000105248|ENST00000262962|YJU2 8.444304893310646 0.6198977621250997 3 WK{I|L} 3 -1 24.425 0.0 0.0 2.1062 0.0 0.0 714.3970814435562 0.0 714.3970814435562 0.0 12.43501263708417 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 WK{I|L} 2.1062 - 211 1 1.605 72958.7 1.0 4528 5280 9801 HBL1_DMSO_200M_050219_1,9810 HBL1_DMSO_200M_050219_1,9810,YQRDKPLKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9811 51.25 636.0 274600.0 25 0 14646.0 + 11450 GIDASDYQTV 10 198 534.7448456156884 1067.4751382981767 2 534.7447387576103 MULTI CID FTMS 0 0 0 9801 139978.890625 0.421227985755457 -2 0.1624298095703125 10 Unmodified _GIDASDYQTV_ ENSG00000085377|ENST00000652536|PREP 25.399314129420983 0.3980215340001851 3 {[VA]|[{I|L}G]}DA 4 6 24.526 0.0 0.0 2.2975 0.0 0.0 0.0 708.2826693863204 708.2826693863204 0.4596683253199529 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {[VA]|[{I|L}G]}DA 2.2975 + + 862 1 1.605 135267.0 1.0 4529 5280 9801 HBL1_DMSO_200M_050219_1,9811 HBL1_DMSO_200M_050219_1,9811,GIDASDYQTV False True GIDASDYQTV 51.250371 534.74473875761 2534677.5 9801.0 ENSG00000085377|ENST00000652536|PREP 4.939954280853272 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9812 51.262 644.0 103910.0 25 0 4406.8 25866 NLFEEQERQER 11 122 739.3556396365166 0 739.3556396365166 PEAK CID FTMS 0 0 0 -1 0 11 Unmodified _NLFEEQERQER_ ENSG00000135148|ENST00000412615|TRAFD1 6.630372943996041 0.4761840153648598 3 NADNP 5 10 38.914 0.0 0.0 2.6352 0.0 0.0 227.130108989876 735.3251436822874 962.4552526721634 0.0 0.0 0.0 0.0 0 1.0114393726401687 0.0 0.0 0.6861818737241735 NADNP 2.6352 - 381 + 1 1.605 52075.1 1.0 4530 5280 9801 HBL1_DMSO_200M_050219_1,9812 HBL1_DMSO_200M_050219_1,9812,NLFEEQERQER False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9814 51.266 31.0 1893200.0 25 0 407330.0 + 44802 YPNGHFVRV 9 85 363.5251643455127 1087.553663636738 3 363.5260497927666 MULTI CID FTMS 0 0 0 9813 1379032.375 0.5867334033652775 2 -0.16650390625 1 Unmodified _YPNGHFVRV_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 24.020572477871973 0.2255576514309169 3 YPNGH{M(Oxidation (M))|F}V[RV] 9 0 + 61.119 0.0 0.0 5.6199 5.6199 81.905 0.0 0.0 0.0 37.26326170942819 7.147642715192504 7.147642715192504 4.771212547196626 0 0.0 0.0 0.0 0.3494850021680094 + + YPNGH{M(Oxidation (M))|F}V[RV];YPNGHV{M(Oxidation (M))|F}[RV];YPGGGH{M(Oxidation (M))|F}V[RV];YPGGGHV{M(Oxidation (M))|F}[RV];Y[HM]H{M(Oxidation (M))|F}V[RV];YPN[RH]{M(Oxidation (M))|F}[RV];Y[HM]HV{M(Oxidation (M))|F}[RV];YPGG[RH]{M(Oxidation (M))|F}[RV];{[HG]|PP}{I|L}{I|L}VHGN{[QN]|[E{I|L}]|[KN]};{[HG]|PP}{I|L}{I|L}VHGGG{[QN]|[E{I|L}]|[KN]} 5.6199;5.1812;4.7732;4.3345;3.2556;3.1382;2.8169;2.2866;2.1717;1.0077 +;-;-;-;-;-;-;-;-;- + 116 + 1 1.605 55879.5 1.0 4531 5281 9813 HBL1_DMSO_200M_050219_1,9814 HBL1_DMSO_200M_050219_1,9814,YPNGHFVRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9815 51.267 33.0 1333200.0 25 0 110310.0 + 21792 LPNGQTVQV 9 86 478.2636403675461 0 478.2636596560478 PEAK CID FTMS 0 0 0 9813 737980.875 0.2566024468790049 3 -0.1951522827148437 2 Unmodified _LPNGQTVQV_ ENSG00000118260|ENST00000353267|CREB1;ENST00000480189.5_1_2:208424955-208436489:+|nuORF;ENST00000494094.5_1_2:208420359-208432297:+|nuORF;nc|ENSG00000118260|P16220-1|CREB1;nc|ENSG00000118260|P16220-3|CREB1 28.486842064014134 0.1241350795510704 3 AV 2 8 7.9588 0.0 0.0 0.83381 0.0 0.0 208.0866546591172 573.3029268854124 781.3895815445296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AV 0.83381 - 70 + 1 1.605 39467.9 1.0 4532 5281 9813 HBL1_DMSO_200M_050219_1,9815 HBL1_DMSO_200M_050219_1,9815,LPNGQTVQV True True LPNGQTVQV 51.267075 478.263659656048 30946214.0 9813.0 ENST00000480189.5_1_2:208424955-208436489:+|nuORF;;nc|ENSG00000118260|P16220-3|CREB1;;ENST00000494094.5_1_2:208420359-208432297:+|nuORF;;ENSG00000118260|ENST00000353267|CREB1;;nc|ENSG00000118260|P16220-1|CREB1 4.42573356628418 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9816 51.268 26.0 1924000.0 25 0 219600.0 + 24828 MPKLGKARLI 10 69 376.2425168003341 1125.7057210012022 3 376.2425414919853 MULTI CID FTMS 0 0 0 9813 1234946.25 1.0 0 0.0 3 Unmodified _MPKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 10.073929032068715 0.6785112666868882 3 MPQK{I|L}K[R{I|L}]{I|L} 9 -1 + 44.051 0.0 0.0 3.9132 3.9132 80.98 0.0 0.0 0.0 24.47411904393021 1.7956061064919029 1.7956061064919029 9.208187539523747 0 0.0 0.0 0.0 0.5 MPQK{I|L}K[R{I|L}]{I|L};MP[AG]K{I|L}K[R{I|L}]{I|L} 3.9132;3.0952 -;- 39 + 1 1.605 45925.5 1.0 4533 5281 9813 HBL1_DMSO_200M_050219_1,9816 HBL1_DMSO_200M_050219_1,9816,MPKLGKARLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9817 51.269 42.0 1147300.0 25 0 119030.0 44762 YPLNLPSV 8 75 451.7530328454394 901.4915127576788 2 451.7528869509697 MULTI CID FTMS 0 0 0 9813 838433.1875 0.9021920588801208 14 -1.3594856262207031 4 Unmodified _YPLNLPSV_ ENSG00000158528|ENST00000433360|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A;nc|ENSG00000158528|Q9ULJ8|PPP1R9A 21.74664581756881 0.5868176546531598 3 YP{I|L} 3 5 48.06 0.0 0.0 5.3311 0.0 0.0 0.0 525.2688082330686 525.2688082330686 33.89075625191822 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YP{I|L} 5.3311 + + 81 + 1 1.605 45875.4 1.0 4534 5281 9813 HBL1_DMSO_200M_050219_1,9817 HBL1_DMSO_200M_050219_1,9817,YPLNLPSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9818 51.271 64.0 1121400.0 25 0 103630.0 + 31904 RTVEKTWKL 9 95 387.5642097546696 1159.670799864209 3 387.5643188357353 MULTI CID FTMS 0 0 0 9813 706296.3125 0.5286806343976177 -1 0.0569686889648437 5 Unmodified _RTVEKTWKL_ ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-2|CBLB;nc|ENSG00000114423|Q13191-3|CBLB 27.128809495255545 0.1860100384555814 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEKT{[SA]|[TG]}R{I|L} 10 3 + 54.416 0.0 0.0 4.6924 4.6924 54.64 0.0 0.0 0.0 0.0 10.476146931408294 0.0 0.0 0 1.6307196863200843 0.0 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEKT{[SA]|[TG]}R{I|L};{[WT]|[RM]}VVKT{[SA]|[TG]}R{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEKTWK{I|L};{[WT]|[RM]}VVKTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EVKT{[SA]|[TG]}R{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EVKTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTRT{[SA]|[TG]}R{I|L};{[WT]|[RM]}VVKT{[SA]|[TG]}[VG]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTRTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R{I|L} 4.6924;4.6924;4.4684;4.4684;4.4328;4.2089;4.0665;3.9021;3.8426;3.4995 -;-;+;-;-;-;-;-;-;- + 507 1 1.605 62360.4 1.0 4535 5281 9813 HBL1_DMSO_200M_050219_1,9818 HBL1_DMSO_200M_050219_1,9818,RTVEKTWKL False True RTVEKTWKL 51.270983 387.564318835735 15266606.0 9813.0 nc|ENSG00000114423|Q13191-2|CBLB;;nc|ENSG00000114423|Q13191-3|CBLB;;ENSG00000114423|ENST00000394030|CBLB 7.919992287953694 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9819 51.279 427.0 245410.0 25 0 54210.0 + 45966 YYYNGKAVYA 10 116 606.2902858024082 1210.5660186716163 2 606.2900268435478 MULTI CID FTMS 0 0 0 9813 404368.21875 0.4976068324794272 3 -0.1951522827148437 6 Unmodified _YYYNGKAVYA_ ENST00000563760.5_1_18:52921909-52988969:-|nuORF;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-6|TCF4 30.63653989081413 0.2803493085145199 3 [KG]NAVYYY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 10 8 + 52.119 0.0 0.0 4.3053 4.3053 70.65 0.0 0.0 0.0 3.177418734074564 16.18878395674662 3.177418734074564 0.4007424796811278 0 0.4247425010840047 0.0 0.0 1.6936726795685342 [KG]NAVYYY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KG]NYAVYY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KG]NAYVYY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[HD]YYVAKG{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[KG]NYAYVY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KG]NAYYVY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KG]GGAVYYY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KG]GGYAVYY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[YN]GKAYVY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KG]GGAYVYY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 4.3053;4.2722;4.0668;3.9203;3.797;3.5916;3.5483;3.5152;3.4451;3.3098 -;-;-;-;-;-;-;-;-;- 816 1 1.605 77957.1 1.0 4536 5281 9813 HBL1_DMSO_200M_050219_1,9819 HBL1_DMSO_200M_050219_1,9819,YYYNGKAVYA False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 9820 51.282 185.0 353130.0 25 0 13829.0 -1 MAGHCTVLV 9 119 494.2395504629343 986.4645479926686 2 494.2397033572197 MULTI CID FTMS 0 0 0 9813 250404.09375 0.9971746475029444 -1 0.0569686889648437 7 Carbamidomethyl (C) _MAGHC(Carbamidomethyl (C))TVLV_ ENSG00000081842|ENST00000529310|PCDHA6;ENSG00000204962|ENST00000531613|PCDHA8;nc|ENSG00000081842|Q9UN73-2|PCDHA6;nc|ENSG00000081842|Q9UN73-3|PCDHA6;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8 12.531546534597751 0.4974689918368763 3 MA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TGHPV 9 -1 + 41.715 0.0 0.0 4.2287 4.2287 73.172 0.0 0.0 0.0 30.121243931024047 1.0139625381852184 1.0139625381852184 1.9382002601611248 0 0.4247425010840047 2.0 0.0 0.0 MA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TGHPV;MA[YQ][HA]APV;MA[YV]NGHPV;MA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HS]APV;MA[YQ]AAHPV;MA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};MA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T[YQ]V;MA[YV]ND{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};MA[YQ]{[CP]|[EA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};MA[YV]GGGHPV 4.2287;4.0323;3.7451;3.7271;3.7271;3.4274;3.2489;2.9437;2.9258;2.8116 -;-;-;-;-;-;-;-;-;- 385 + 1 1.605 57494.5 1.0 4537 5281 9813 HBL1_DMSO_200M_050219_1,9820 HBL1_DMSO_200M_050219_1,9820,MAGHCTVLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9821 51.286 207.0 268380.0 25 0 16865.0 -1 0 120 347.198551617084 692.382550300968 2 347.1983215212822 MULTI CID FTMS 0 0 0 9813 217710.203125 0.7531927621031541 -15 1.153400421142578 8 3 {I|L} 1 -1 9.9148 0.0 0.0 1.432 0.0 0.0 561.287531845693 0.0 561.287531845693 0.0 0.6454734818972874 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.432 - 21 + 1 1.605 45644.3 1.0 4538 5281 9813 HBL1_DMSO_200M_050219_1,9821 HBL1_DMSO_200M_050219_1,9821, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9822 51.296 567.0 103390.0 25 0 5652.7 + 24389 MFPEHAVKAY 10 108 596.793811349166 1191.573069765132 2 597.2957031130791 MULTI CID FTMS 0 0 0 9813 185898.203125 1.0 0 0.0 9 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 13.90604991867851 0.6142120002215601 3 [EP]HAVKAN 8 3 40.047 0.0 0.0 3.3609 0.0 0.0 0.0 342.1287697985883 342.1287697985883 24.56276287873237 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3494850021680094 0.0 [EP]HAVKAN 3.3609 - 141 1 1.605 47636.8 1.0 4539 5281 9813 HBL1_DMSO_200M_050219_1,9822 HBL1_DMSO_200M_050219_1,9822,MFPEHAVKAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9823 51.301 299.0 238230.0 25 0 14751.0 + 28823 QAALARVV 8 107 414.2596340466147 826.5047151600294 2 414.2591125369072 MULTI CID FTMS 0 0 0 9813 143998.953125 0.4753352050480801 -1 0.0569686889648437 10 Unmodified _QAALVGLR_ ENSG00000196497|ENST00000354464|IPO4;ENST00000561379.1_1_14:24651787-24652670:-|nuORF;nc|ENSG00000196497|Q8TEX9-2|IPO4;ENST00000558780.5_2_14:24651254-24657791:-|nuORF 18.13498045792455 0.6430038125133779 3 [QA]A{I|L}TPKV 8 4 + 32.383 0.0 0.0 3.9181 3.9181 83.744 0.0 0.0 0.0 21.545484919046217 4.404923593575013 4.404923593575013 18.750612633917 0 0.2742275032520141 0.8860566476931632 0.0 0.0 [QA]A{I|L}TPKV;[QA][{I|L}T]APKV;K{[RE]|[WV]}APKV;K[RK]VP{[CP]|[EA]} 3.9181;1.6494;1.3745;0.6647 -;-;-;- 120 + 1 1.605 60327.5 1.0 4540 5281 9813 HBL1_DMSO_200M_050219_1,9823 HBL1_DMSO_200M_050219_1,9823,QAALVGLR False False QAALARVV 51.3015 414.259112536907 1553410.0 9813.0 ENSG00000196497|ENST00000354464|IPO4;;ENST00000561379.1_1_14:24651787-24652670:-|nuORF;;nc|ENSG00000196497|Q8TEX9-2|IPO4;;ENST00000558780.5_2_14:24651254-24657791:-|nuORF 1.9493987560272217 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9824 51.307 279.0 202210.0 25 0 17525.0 -1 LQMMCLMV 8 86 508.7164750017732 1015.4183970703464 2 508.7155639529228 MULTI CID FTMS 0 0 0 9813 126594.828125 0.6759110184320583 -1 0.0569686889648437 11 3 Oxidation (M) _LQM(Oxidation (M))M(Oxidation (M))CLM(Oxidation (M))V_ ENST00000332687.10_1_X:73812854-73814152:-|nuORF 5.760428011301431 0.7893668129297577 3 Q 1 -1 13.852 0.0 0.0 1.3641 0.0 0.0 869.3488760515949 0.0 869.3488760515949 0.0 1.8618187372417336 0.0 0.0 0 0.0 0.0 0.0 0.1861818737241735 Q 1.3641 + + 63 + 1 1.605 50070.2 1.0 4541 5281 9813 HBL1_DMSO_200M_050219_1,9824 HBL1_DMSO_200M_050219_1,9824,LQMMCLMV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9825 51.318 654.0 176880.0 25 0 17626.0 + 20931 LNEISEETTIQ 11 127 638.818479609425 0 638.8195678591728 PEAK CID FTMS 0 0 0 9813 115321.3125 0.5860491884791852 -1 0.0569686889648437 12 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 45.739877483867886 0.0842102730066321 3 NADQN 5 10 27.396 0.0 0.0 2.1476 0.0 0.0 113.08983610567869 617.2895601861936 730.3793962918724 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.4247425010840047 NADQN 2.1476 - 675 + 1 1.605 95114.8 1.0 4542 5281 9813 HBL1_DMSO_200M_050219_1,9825 HBL1_DMSO_200M_050219_1,9825,LNEISEETTIQ True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9826 51.329 617.0 175290.0 25 0 6374.2 28231 PQQNGQPLRP 10 165 567.804130994513 1133.593709055826 2 567.8062621951103 MULTI CID FTMS 0 0 0 9813 108971.0 0.910759968054846 3 -0.1951522827148437 13 Unmodified _PQQNGQPLRP_ ENSG00000196923|ENST00000355841|PDLIM7;nc|ENSG00000196923|Q9NR12-4|PDLIM7;nc|ENSG00000196923|Q9NR12-5|PDLIM7;nc|ENSG00000196923|Q9NR12-6|PDLIM7 9.38312468134398 0.6832340498775793 3 [RV][VS]NTS{M(Oxidation (M))|F}[KP] 10 9 + 29.378 0.0 0.0 2.5916 2.5916 75.999 0.0 0.0 0.0 2.7128283788701104 13.893909694490077 2.7128283788701104 7.14619238958824 0 0.0 0.8860566476931632 0.0 0.1643943297944484 [RV][VS]NTS{M(Oxidation (M))|F}[KP];{[TV]|[{I|L}S]}[Q{I|L}]NTS{M(Oxidation (M))|F}[KP];[RV][VS]GGTS{M(Oxidation (M))|F}[KP];[AG]KKGNTS{M(Oxidation (M))|F}[KP];[AG]V[{I|L}T]NTS{M(Oxidation (M))|F}[KP];{[TV]|[{I|L}S]}[Q{I|L}]GGTS{M(Oxidation (M))|F}[KP];[AG]PVC[KT]S{M(Oxidation (M))|F}[KP];[AG]VPC[KT]S{M(Oxidation (M))|F}[KP];{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]NTS{M(Oxidation (M))|F}[KP];[QP]VC[KT]S{M(Oxidation (M))|F}[KP] 2.5916;1.9612;1.7832;1.5625;1.1635;1.1528;1.0825;0.94906;0.84508;0.76412 -;-;-;-;-;-;-;-;-;- 468 1 1.605 86257.3 1.0 4543 5281 9813 HBL1_DMSO_200M_050219_1,9826 HBL1_DMSO_200M_050219_1,9826,PQQNGQPLRP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9827 51.343 746.0 207270.0 25 0 9256.3 + 41980 VQMHKMKQCLQ 11 149 731.8500510335971 1461.685549133994 2 731.8516723513603 MULTI CID FTMS 0 0 0 9813 105257.3671875 0.3469090537749673 -1 0.0569686889648437 14 Carbamidomethyl (C),2 Oxidation (M) _VQM(Oxidation (M))HKM(Oxidation (M))KQC(Carbamidomethyl (C))LQ_ REV__ENSG00000106546|ENST00000242057|AHR 47.74868867922204 0.1300977870992118 3 {[QV]|[N{I|L}]|[RA]|[KV]}NEEMP{M(Oxidation (M))|F}NN{I|L}Q 12 -1 + 84.863 0.0 0.0 5.8058 5.8058 78.605 0.0 0.0 0.0 18.359011795681223 9.098233696509112 9.098233696509112 2.073507628719369 0 3.017220322351953 2.0 0.2742275032520141 1.3231074559755158 {[QV]|[N{I|L}]|[RA]|[KV]}NEEMP{M(Oxidation (M))|F}NN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEM[HM]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEMP[NG]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEMP{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEM[MN]{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}GGEEMP{M(Oxidation (M))|F}NN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEMP{M(Oxidation (M))|F}GGN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEMP{M(Oxidation (M))|F}NGG{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEMP{M(Oxidation (M))|F}N{I|L}NQ;{[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q 5.8058;5.6639;5.586;5.5435;5.3276;5.1834;5.1834;5.1834;4.9663;4.8642 -;-;-;-;-;-;-;-;-;- 3475 1 1.605 113184.8 1.0 4544 5281 9813 HBL1_DMSO_200M_050219_1,9827 HBL1_DMSO_200M_050219_1,9827,VQMHKMKQCLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9828 51.357 800.0 26074.0 25 0 3877.4 -1 0 29 1091.441455066204 0 1091.441455066204 PEAK CID FTMS 0 0 0 -1 0 15 3 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.1421 0.0 0.0 1058.3344959704957 972.4415220722972 2030.7760180427929 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.1421 - 4 + 1 1.605 23611.0 0.6100000143051147 4545 5281 9813 HBL1_DMSO_200M_050219_1,9828 HBL1_DMSO_200M_050219_1,9828, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9830 51.361 14.0 2888400.0 25 0 366700.0 + 4287 DAREIVNNV 9 77 515.2698641229689 1028.5251753127377 2 515.2704955935478 MULTI CID FTMS 0 0 0 9829 1969144.75 0.1624942854737981 3 -0.1732025146484375 1 Unmodified _DAREIVNNV_ ENSG00000077097|ENST00000264331|TOP2B;nc|ENSG00000077097|Q02880-2|TOP2B 16.149105407346934 0.3995459350917656 3 GM[DP]{I|L}VNNV 9 4 28.121 0.0 0.0 2.7341 0.0 0.0 71.07423598457187 0.0 71.07423598457187 0.0 16.13167495213411 0.0 0.0 0 0.6237125054200235 0.0 0.0 0.0 GM[DP]{I|L}VNNV 2.7341 - 132 1 1.605 36719.5 1.0 4546 5282 9829 HBL1_DMSO_200M_050219_1,9830 HBL1_DMSO_200M_050219_1,9830,DAREIVNNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9831 51.362 16.0 2835700.0 25 0 550480.0 + 14140 IAYKFGKTV 9 68 342.8710500758393 1025.591320827718 3 342.8708679080009 MULTI CID FTMS 0 0 0 9829 2506782.25 0.3638384106529297 1 -0.0712127685546875 2 Unmodified _IAYKFGKTV_ ENSG00000133872|ENST00000256255|SARAF 24.99096001346401 0.2132109383330889 3 {I|L}AYK{M(Oxidation (M))|F}[KG]TV 9 0 + 54.632 0.0 0.0 5.3268 5.3268 89.764 0.0 0.0 0.0 40.53904087461092 5.123337350737245 5.123337350737245 54.63160941989898 0 0.3054621874040891 1.3010299956639813 0.3494850021680094 0.0 + + {I|L}AYK{M(Oxidation (M))|F}[KG]TV 5.3268 + + 95 + 1 1.605 45607.1 1.0 4547 5282 9829 HBL1_DMSO_200M_050219_1,9831 HBL1_DMSO_200M_050219_1,9831,IAYKFGKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9832 51.364 22.0 2758000.0 25 0 431100.0 + 22009 LPPPPPPAM 9 93 458.7515933437354 915.4886337542708 2 458.7516662478447 MULTI CID FTMS 0 0 0 9829 1942169.625 0.2775041220122778 -12 0.8679924011230469 3 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 3 [{I|L}P]PPPP 6 3 52.797 0.0 0.0 5.7671 0.0 0.0 0.0 314.11738394712035 314.11738394712035 35.80706579873059 0.0 0.0 0.0 0 1.6421590589602533 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.7671 + + 291 1 1.605 52148.9 1.0 4548 5282 9829 HBL1_DMSO_200M_050219_1,9832 HBL1_DMSO_200M_050219_1,9832,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9833 51.365 34.0 1582800.0 25 0 94320.0 + 16834 KIAPNTPQL 9 87 491.2911931750197 980.5678334168394 2 491.2899963259697 MULTI CID FTMS 0 0 0 9829 1437786.25 0.3814622763152588 -3 0.1954269409179687 4 Unmodified _KIAPNTPQL_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 53.832793166522166 0.0319663582346103 3 [QP]{I|L}GKT 6 8 33.938 0.0 0.0 3.4611 0.0 0.0 0.0 353.18546915736187 353.18546915736187 17.340095528211133 0.0 0.0 0.0 0 0.8807196863200843 1.0969100130080565 0.3807196863200844 0.0 [QP]{I|L}GKT 3.4611 - 393 1 1.605 46095.0 1.0 4549 5282 9829 HBL1_DMSO_200M_050219_1,9833 HBL1_DMSO_200M_050219_1,9833,KIAPNTPQL True True KIAPNTPQL 51.364726 491.28999632597 55775108.0 9829.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 5.891248861948649 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9834 51.366 36.0 1678500.0 25 0 231280.0 + 21587 LPKNPEHFV 9 104 360.8660720050355 1079.5763866153063 3 360.8658019900322 MULTI CID FTMS 0 0 0 9829 1378042.125 0.9966767307688136 1 -0.0712127685546875 5 Unmodified _LPKNPEHFV_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 18.1463463914782 0.3454829746528889 3 {I|L}PKN[C(Carbamidomethyl (C))K]NP 8 5 45.366 0.0 0.0 4.2022 0.0 0.0 0.0 125.07235132388908 125.07235132388908 21.42082582439828 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.7059771852360797 {I|L}PKN[C(Carbamidomethyl (C))K]NP 4.2022 - 278 + 1 1.605 55934.5 1.0 4550 5282 9829 HBL1_DMSO_200M_050219_1,9834 HBL1_DMSO_200M_050219_1,9834,LPKNPEHFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9835 51.367 30.0 1431600.0 25 0 103370.0 + 21128 LPAPPTQNM 9 88 484.7473525872371 0 484.7474548220634 PEAK CID FTMS 0 0 0 9829 1368341.75 0.3014398529305666 -4 0.3146896362304687 6 Unmodified _LPAPPTQNM_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 39.957323273325 0.0619271662220897 3 NQTP 4 8 17.639 0.0 0.0 1.8232 0.0 0.0 149.05871777037424 375.20322595767817 524.2619437280524 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.0 NQTP 1.8232 - 83 + 1 1.605 38949.3 1.0 4551 5282 9829 HBL1_DMSO_200M_050219_1,9835 HBL1_DMSO_200M_050219_1,9835,LPAPPTQNM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9836 51.368 40.0 1071400.0 25 0 52321.0 + -1 STVGICMLV 9 90 498.24831089552737 994.4820688578548 2 498.2494994997978 MULTI CID FTMS 0 0 0 9829 1059905.5 0.8475651171468415 1 -0.0712127685546875 7 Carbamidomethyl (C),Oxidation (M) _STVGIC(Carbamidomethyl (C))M(Oxidation (M))LV_ REV__ENSG00000112394|ENST00000368851|SLC16A10 12.531546534597751 0.4974689918368763 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YQ[KP]TV 8 -1 + 22.062 0.0 0.0 2.2184 2.2184 75.198 0.0 0.0 0.0 8.082137524177995 6.812412373755869 6.812412373755869 6.812412373755869 0 0.0 1.2218487496163564 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YQ[KP]TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YQ[KP]S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[AG][KP]TV;[{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))S][HK]{[MS]|[{M(Oxidation (M))|F}A]};[{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))S][VP]{[WT]|[RM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TP][KQ]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[AG][KP]S{I|L} 2.2184;1.5334;1.287;0.84088;0.84088;0.8127;0.60202 -;-;-;-;-;-;- 158 + 1 1.605 39497.9 1.0 4552 5282 9829 HBL1_DMSO_200M_050219_1,9836 HBL1_DMSO_200M_050219_1,9836,STVGICMLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9837 51.37 63.0 783250.0 25 0 57898.0 + 26368 NSYVSPRI 8 84 468.2507486560251 934.4869443788502 2 468.2507507205009 MULTI CID FTMS 0 0 0 9829 790741.375 0.2743171635347943 4 -0.2711410522460937 8 Unmodified _NSYVSPRI_ ENSG00000136536|ENST00000409175|MARCHF7;nc|ENSG00000136536|Q9H992-2|MARCHF7 41.8396318013385 0.2035142800366642 3 [NS]YVS[RP]{I|L} 8 0 + 49.135 0.0 0.0 5.2579 5.2579 87.419 0.0 0.0 0.0 38.02555329489415 2.184334470932044 2.184334470932044 14.815534464597704 0 0.9247425010840048 1.6989700043360187 0.0 0.3054621874040891 + + [NS]YVS[RP]{I|L};[NS]Y{I|L}[RP]SV 5.2579;3.6725 +;- + 130 + 1 1.605 45703.6 1.0 4553 5282 9829 HBL1_DMSO_200M_050219_1,9837 HBL1_DMSO_200M_050219_1,9837,NSYVSPRI False True NSYVSPRI 51.369789 468.250750720501 73554078.0 9829.0 nc|ENSG00000136536|Q9H992-2|MARCHF7;;ENSG00000136536|ENST00000409175|MARCHF7 5.32174825668335 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9838 51.371 60.0 1250200.0 25 0 304450.0 + 45897 YYSPHGHIL 9 90 362.8504324454907 1085.529467936672 3 362.8502990603447 MULTI CID FTMS 0 0 0 9829 762906.625 0.3429034237906118 -3 0.1954269409179687 9 Unmodified _YYSPHGHIL_ ENSG00000144895|ENST00000460851|EIF2A;nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A 26.34127834903884 0.1960301806784604 3 YYSPH 5 4 37.703 0.0 0.0 3.4732 0.0 0.0 0.0 435.2371566751766 435.2371566751766 22.240378209512315 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + YYSPH 3.4732 + + 135 + 1 1.605 65642.0 1.0 4554 5282 9829 HBL1_DMSO_200M_050219_1,9838 HBL1_DMSO_200M_050219_1,9838,YYSPHGHIL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9839 51.373 61.0 894640.0 25 0 102560.0 + 41942 VQIEEVRQV 9 74 550.3086874421073 1098.6028219510144 2 550.3087036013603 MULTI CID FTMS 0 0 0 9829 716879.25 0.098427226343727 -3 0.1954269409179687 10 Unmodified _VQIEEVRQV_ ENSG00000143621|ENST00000361891|ILF2 45.739877483867886 0.0497104363764649 3 {I|L}EEVRE 6 4 55.979 0.0 0.0 5.0955 0.0 0.0 227.1265019552839 113.07239710025624 340.1988990555401 0.0 0.0 0.0 0.0 0 1.7302046884880935 0.0 0.8494850021680094 0.3807196863200844 {I|L}EEVRE 5.0955 - 138 + 1 1.605 49895.3 1.0 4555 5282 9829 HBL1_DMSO_200M_050219_1,9839 HBL1_DMSO_200M_050219_1,9839,VQIEEVRQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9840 51.374 50.0 1449900.0 25 0 118220.0 39849 VFFPKRREL 9 82 397.9047812109325 1190.6925142329976 3 397.9046508669853 MULTI CID FTMS 0 0 0 9829 695484.3125 1.0 0 0.0 11 Unmodified _VFFPKRREL_ ENSG00000126391|ENST00000317568|FRMD8;nc|ENSG00000126391|Q9BZ67-2|FRMD8;nc|ENSG00000126391|Q9BZ67-3|FRMD8 9.5439744041441 0.5815088571869578 3 V{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 4 7 33.32 0.0 0.0 2.7984 0.0 0.0 0.0 681.3802590340624 681.3802590340624 18.20459799272988 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 V{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 2.7984 - 111 + 1 1.605 66925.0 1.0 4556 5282 9829 HBL1_DMSO_200M_050219_1,9840 HBL1_DMSO_200M_050219_1,9840,VFFPKRREL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9841 51.376 65.0 920330.0 25 0 93765.0 + 15219 IPAVTRSTI 9 87 479.2913331621507 956.5681133911014 2 479.2928039431572 MULTI CID FTMS 0 0 0 9829 503415.3125 1.0 0 0.0 12 Unmodified _IPFLQLQV_ nc|ENSG00000112851|Q96RT1-9|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-7|ERBIN 26.34127834903884 0.4900704351052977 3 {I|L}PAVT 5 6 50.445 0.0 0.0 5.2736 0.0 0.0 0.0 472.2538241022094 472.2538241022094 26.264100213633768 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.0 {I|L}PAVT 5.2736 - 135 + 1 1.605 50840.2 1.0 4557 5282 9829 HBL1_DMSO_200M_050219_1,9841 HBL1_DMSO_200M_050219_1,9841,IPFLQLQV False False IPAVTRSTI 51.375674 479.292803943157 2330273.75 9829.0 nc|ENSG00000112851|Q96RT1-9|ERBIN;;nc|ENSG00000112851|Q96RT1-3|ERBIN;;nc|ENSG00000112851|Q96RT1-5|ERBIN;;nc|ENSG00000112851|Q96RT1-2|ERBIN;;ENSG00000112851|ENST00000284037|ERBIN;;nc|ENSG00000112851|Q96RT1-4|ERBIN;;nc|ENSG00000112851|Q96RT1-8|ERBIN;;nc|ENSG00000112851|Q96RT1-6|ERBIN;;nc|ENSG00000112851|Q96RT1-7|ERBIN 0.8130617340405782 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9842 51.377 63.0 812090.0 25 0 55087.0 + 22188 LPQEIKANV 9 93 506.2936941658803 1010.5728353985606 2 506.2956420779228 MULTI CID FTMS 0 0 0 9829 446423.21875 0.4133907646370651 -3 0.1954269409179687 13 Unmodified _LPQEIKANV_ ENSG00000262814|ENST00000333676|MRPL12 38.17557092003332 0.0854718145212029 3 {I|L}PQE{I|L}[VP]Y 8 4 59.615 0.0 0.0 5.8992 0.0 0.0 0.0 68.05130945377186 68.05130945377186 44.35464087144375 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.75 {I|L}PQE{I|L}[VP]Y 5.8992 - 187 + 1 1.605 45591.2 1.0 4558 5282 9829 HBL1_DMSO_200M_050219_1,9842 HBL1_DMSO_200M_050219_1,9842,LPQEIKANV True True LPQEIKANV 51.377199 506.295642077923 7410085.5 9829.0 ENSG00000262814|ENST00000333676|MRPL12 6.279013474782308 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9843 51.38 112.0 493940.0 25 0 69039.0 10897 GAGNLTKF 8 98 404.2211412088384 806.4277294844768 2 404.2210876345634 MULTI CID FTMS 0 0 0 9829 488252.78125 1.0 0 0.0 14 Unmodified _GAGNLTKF_ ENSG00000118407|ENST00000237172|FILIP1;nc|ENSG00000118407|Q7Z7B0-3|FILIP1 2.577480529830294 0.808687252328423 3 [YE]{I|L}NR{I|L} 6 7 + 43.023 0.0 0.0 5.335 5.335 77.064 0.0 0.0 0.0 23.46787486224656 2.07608310501746 2.07608310501746 2.07608310501746 0 0.0 1.6989700043360187 0.0 0.7302046884880937 [YE]{I|L}NR{I|L};[YE]{I|L}{I|L}[RN];[YE]{I|L}GGR{I|L} 5.335;5.0776;4.1669 -;-;- 49 + 1 1.605 49346.5 1.0 4559 5282 9829 HBL1_DMSO_200M_050219_1,9843 HBL1_DMSO_200M_050219_1,9843,GAGNLTKF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9844 51.39 624.0 181580.0 25 0 8798.5 + -1 LSKAWEAMTCA 11 130 613.7819521902845 1225.549351447369 2 613.7828246951103 MULTI CID FTMS 0 0 0 9829 319430.9375 0.2707209036320781 -3 0.1954269409179687 15 Oxidation (M) _LSKAWEAM(Oxidation (M))TCA_ REV__ENST00000234111.8_1_2:10580547-10580775:-|nuORF 12.240655878213236 0.7805268987462184 3 [VG]KDMVGV 8 -1 49.818 0.0 0.0 4.065 0.0 0.0 0.0 437.1161548279884 437.1161548279884 26.814951104263898 0.0 0.0 0.0 0 0.5 2.0 1.066901560044258 0.3494850021680094 [VG]KDMVGV 4.065 - 2062 1 1.605 88870.7 1.0 4560 5282 9829 HBL1_DMSO_200M_050219_1,9844 HBL1_DMSO_200M_050219_1,9844,LSKAWEAMTCA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9845 51.395 227.0 214170.0 25 0 24944.0 7783 ELGSVTTL 8 96 410.2265932627058 818.4386335922117 2 410.2263061404228 MULTI CID FTMS 0 0 0 9829 225924.828125 0.7219374753099512 1 -0.0712127685546875 16 Unmodified _ELGSVTTL_ ENSG00000148814|ENST00000368614|LRRC27;ENST00000489204.1_1_10:134155720-134158159:+|nuORF;nc|ENSG00000148814|Q9C0I9-2|LRRC27;nc|ENSG00000148814|Q9C0I9-3|LRRC27;nc|ENSG00000148814|Q9C0I9-4|LRRC27 5.230669730166228 0.792582437072536 3 {I|L} 1 7 15.485 0.0 0.0 1.892 0.0 0.0 687.3436303957258 0.0 687.3436303957258 0.0 6.558769305278771 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.892 + + 29 + 1 1.605 43659.7 1.0 4561 5282 9829 HBL1_DMSO_200M_050219_1,9845 HBL1_DMSO_200M_050219_1,9845,ELGSVTTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9846 51.408 743.0 136100.0 25 0 20239.0 + 45961 YYYNGKAVY 9 136 570.7716671990999 1139.5287814649996 2 570.7720825076103 MULTI CID FTMS 0 0 0 9829 218908.015625 0.0302442476379886 4 -0.2711410522460937 17 Unmodified _YYYNGKAVY_ ENST00000563760.5_1_18:52921909-52988969:-|nuORF;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-6|TCF4 37.97399986684836 0.0865783450051559 3 YYY 3 6 43.984 0.0 0.0 3.8599 0.0 0.0 0.0 647.3142183893186 647.3142183893186 13.541846063930649 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + YYY 3.8599 + + 831 + 1 1.605 79467.1 1.0 4562 5282 9829 HBL1_DMSO_200M_050219_1,9846 HBL1_DMSO_200M_050219_1,9846,YYYNGKAVY True True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 9847 51.421 800.0 163360.0 25 0 11857.0 + 157 AALQAVNSV 9 161 436.7457210795516 871.4768892259032 2 436.7457153201103 MULTI CID FTMS 0 0 0 9829 208524.265625 1.0 0 0.0 18 Unmodified _AALQAVNSV_ ENSG00000011304|ENST00000356948|PTBP1;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1 57.47134341890925 0.0274820932774257 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PVNSV 8 4 + 30.583 0.0 0.0 3.5093 3.5093 81.622 0.0 0.0 0.0 5.924574113457712 2.201841230701352 2.201841230701352 12.514712847550763 0 0.718765315847925 0.0 0.6989700043360187 0.3252574989159953 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PVNSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PVGGSV;AA{I|L}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[{I|L}T]NAP;{[NV]|[RG]}S[{I|L}T]{I|L}[EP] 3.5093;2.0733;0.91713;0.55794;0.22677 -;-;-;-;- 454 + 1 1.605 104965.0 0.8500000238418579 4563 5282 9829 HBL1_DMSO_200M_050219_1,9847 HBL1_DMSO_200M_050219_1,9847,AALQAVNSV True True AALQAVNSV 51.421399 436.74571532011 1069973.25 9829.0 ENST00000586944.5_1_19:797434-805231:+|nuORF;;ENSG00000011304|ENST00000356948|PTBP1;;nc|ENSG00000011304|P26599-2|PTBP1;;nc|ENSG00000011304|P26599-1|PTBP1 5.381467342376709 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9848 51.424 153.0 635770.0 25 0 81130.0 + 13458 HLRYCSVHA 9 128 543.270605750448 1084.526658567696 2 543.7725097537041 MULTI CID FTMS 0 0 0 9829 200401.90625 0.1295323467843327 -8 0.6237564086914062 19 Unmodified _HLRYCSVHA_ REV__ENSG00000054938|ENST00000376332|CHRDL2;REV__nc|ENSG00000054938|Q6WN34-2|CHRDL2;REV__nc|ENSG00000054938|Q6WN34-4|CHRDL2 11.640296217721598 0.521594087909532 3 {[QV]|[N{I|L}]|[RA]|[KV]}SNSYY[KP] 9 -1 + 42.616 0.0 0.0 3.9295 3.9295 72.715 0.0 0.0 0.0 2.218487496163561 2.2299768360758776 2.218487496163561 2.218487496163561 0 0.0 1.2218487496163564 0.7059771852360797 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}SNSYY[KP];{[QG]|[NA]}WGSYY[KP];[VG]ASNSYY[KP];{[QV]|[N{I|L}]|[RA]|[KV]}SGGSYY[KP];[VG][KP]GHPSY[SG];{[QV]|[N{I|L}]|[RA]|[KV]}SNS{I|L}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[HG]|PP}HPSYY[KP];{[QG]|[NA]}WGS{I|L}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QG]|[NA]}N{I|L}CYY[KP];[KA]DNSYY[KP] 3.9295;3.7249;3.4052;3.0804;3.0158;2.9932;2.901;2.7887;2.7492;2.6405 -;-;-;-;-;-;-;-;-;- 2035 1 1.605 76526.1 1.0 4564 5282 9829 HBL1_DMSO_200M_050219_1,9848 HBL1_DMSO_200M_050219_1,9848,HLRYCSVHA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9849 51.428 172.0 250440.0 25 0 11988.0 23029 LSKKTKEEV 9 94 531.3122867201452 0 531.7214233279228 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _LSKKTKEEV_ ENSG00000100433|ENST00000319231|KCNK10;nc|ENSG00000100433|P57789-4|KCNK10;nc|ENSG00000100433|P57789|KCNK10 12.531546534597751 0.2832320739326029 3 D 1 9 6.5714 0.0 0.0 0.61959 0.0 0.0 860.493944922909 82.0668200128539 942.5607649357628 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 D 0.61959 - 13 + 1 1.605 44228.0 1.0 4565 5282 9829 HBL1_DMSO_200M_050219_1,9849 HBL1_DMSO_200M_050219_1,9849,LSKKTKEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9851 51.432 37.0 1029000.0 25 0 111450.0 + 25123 MQDDNQVMV 9 79 540.2282424501385 1078.441931967077 2 540.2288085818291 MULTI CID FTMS 0 0 0 9850 991744.75 0.0817602794876696 4 -0.3234024047851562 1 Unmodified _MQDDNQVMV_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 27.628801355627647 0.1796483985696185 3 {[DA]|[EG]}E{[CA]|SS}NQ 7 8 15.145 0.0 0.0 1.4043 0.0 0.0 0.0 344.1667909521987 344.1667909521987 -0.5172219682239092 0.0 -0.5172219682239092 0.0 0 0.0 1.154901959985743 0.0 0.6694451763165201 {[DA]|[EG]}E{[CA]|SS}NQ 1.4043 - 153 1 1.605 38095.9 1.0 4566 5283 9850 HBL1_DMSO_200M_050219_1,9851 HBL1_DMSO_200M_050219_1,9851,MQDDNQVMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9852 51.434 57.0 896990.0 25 0 93384.0 + 4881 DGFQPSRSI 9 77 503.75064442064826 1005.4867359080964 2 503.7516967654228 MULTI CID FTMS 0 0 0 9850 416366.1875 0.1816515656176862 2 -0.10198974609375 2 Unmodified _DGFQPSRSI_ ENSG00000072274|ENST00000360110|TFRC;ENST00000464368.1_1_3:195789435-195792419:-|nuORF 18.1463463914782 0.3454829746528889 3 {I|L}Q[WD] 4 8 21.95 0.0 0.0 2.1831 0.0 0.0 445.227342674025 0.0 445.227342674025 0.0 7.971062485323515 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 {I|L}Q[WD] 2.1831 - 53 1 1.605 43358.5 1.0 4567 5283 9850 HBL1_DMSO_200M_050219_1,9852 HBL1_DMSO_200M_050219_1,9852,DGFQPSRSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9853 51.435 42.0 1396000.0 25 0 295490.0 + 17405 KMPEINAKV 9 87 515.2909099150371 1028.567266896874 2 515.2917358279228 MULTI CID FTMS 0 0 0 9850 871625.4375 0.5533992290508973 -2 0.16650390625 3 Unmodified _KMPEINAKV_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;ENST00000569569.5_1_16:56966069-56970730:+|nuORF;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1 28.23362336080872 0.1719529537093671 3 [EP]{I|L}NAKME 8 4 45.131 0.0 0.0 4.3877 0.0 0.0 0.0 113.11271302408036 113.11271302408036 8.694702268009728 0.0 0.0 0.0 0 0.2742275032520141 1.0 0.0 0.6549471895720984 [EP]{I|L}NAKME 4.3877 - 482 1 1.605 50738.2 1.0 4568 5283 9850 HBL1_DMSO_200M_050219_1,9853 HBL1_DMSO_200M_050219_1,9853,KMPEINAKV False True KMPEINAKV 51.435041 515.291735827923 26347420.0 9850.0 nc|ENSG00000051108|Q15011-2|HERPUD1;;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;;nc|ENSG00000051108|Q15011-3|HERPUD1;;ENSG00000051108|ENST00000439977|HERPUD1;;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;;ENST00000569569.5_1_16:56966069-56970730:+|nuORF 4.083903471628825 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9854 51.437 72.0 911380.0 25 0 63218.0 + 3564 DAAAKALRI 9 82 464.7825154223925 927.5504779115852 2 464.7827941775322 MULTI CID FTMS 0 0 0 9850 628732.5 0.0841462173399031 -3 0.2234725952148437 4 Unmodified _DAAAKALRI_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 56.17704186161178 0.0281986971544335 3 DAAAKA{I|L}R{I|L} 9 0 + 85.862 0.0 0.0 9.2568 9.2568 96.961 0.0 0.0 0.0 76.02867538573598 8.618639668280892 8.618639668280892 15.740312677277188 0 1.5 1.6989700043360187 0.0 0.6861818737241735 + + DAAAKA{I|L}R{I|L};DAAA{I|L}[KA]R{I|L};DAA{I|L}A[KA]R{I|L};WAARRR{I|L};D{[NV]|[RG]}KA{I|L}R{I|L};D{[NV]|[RG]}{I|L}[KA]R{I|L};D{[NV]|[RG]}RRR{I|L} 9.2568;7.5598;6.0959;4.9878;3.9516;2.2547;1.8882 +;-;-;-;-;-;- + 229 + 1 1.605 58430.1 1.0 4569 5283 9850 HBL1_DMSO_200M_050219_1,9854 HBL1_DMSO_200M_050219_1,9854,DAAAKALRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9855 51.438 76.0 963190.0 25 0 113880.0 + 22411 LPTEQPRL 8 87 477.2744555772402 952.5343582212804 2 477.2741577029228 MULTI CID FTMS 0 0 0 9850 632158.3125 0.1802429270051405 -3 0.2234725952148437 5 Unmodified _LPTEQPRL_ ENSG00000102977|ENST00000620761|ACD;ENST00000602423.1_1_16:67693438-67694029:-|nuORF;ENST00000602622.5_1_16:67693438-67693558:-|nuORF;ENST00000602860.5_1_16:67693438-67694150:-|nuORF;ENST00000602945.5_1_16:67692675-67693876:-|nuORF;nc|ENSG00000102977|Q96AP0-2|ACD 37.97399986684836 0.2681860861828418 3 {I|L}PTEQ[R{I|L}]P 8 2 + 75.482 0.0 0.0 7.9243 7.9243 83.607 0.0 0.0 0.0 36.40978057358332 1.5490195998574308 1.5490195998574308 1.5490195998574308 0 0.805462187404089 2.0 0.4247425010840047 0.3494850021680094 {I|L}PTEQ[R{I|L}]P;{I|L}PTEQ[RP]{I|L};{I|L}PTE[AG][R{I|L}]P;{I|L}PTE[AG][RP]{I|L};{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HK]SP 7.9243;7.7617;6.952;6.7893;0.19985 -;+;-;-;- + 183 + 1 1.605 62872.6 1.0 4570 5283 9850 HBL1_DMSO_200M_050219_1,9855 HBL1_DMSO_200M_050219_1,9855,LPTEQPRL False True LPTEQPRL 51.43847 477.274157702923 46825464.0 9850.0 ENST00000602945.5_1_16:67692675-67693876:-|nuORF;;nc|ENSG00000102977|Q96AP0-2|ACD;;ENST00000602622.5_1_16:67693438-67693558:-|nuORF;;ENSG00000102977|ENST00000620761|ACD;;ENST00000602860.5_1_16:67693438-67694150:-|nuORF;;ENST00000602423.1_1_16:67693438-67694029:-|nuORF 4.067744493484497 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9856 51.44 40.0 1242200.0 25 0 96797.0 + -1 HPTTMSVLC 9 92 502.7289256898901 1003.4432984465802 2 502.7289916872978 MULTI CID FTMS 0 0 0 9850 536384.6875 0.519179343641396 1 -0.0286483764648437 6 Oxidation (M) _HPTTM(Oxidation (M))SVLC_ REV__ENSG00000163625|ENST00000295888|WDFY3;REV__nc|ENSG00000163625|Q8IZQ1-2|WDFY3 21.74664581756881 0.2544899275067181 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM 8 -1 + 34.953 0.0 0.0 3.4833 3.4833 83.654 0.0 0.0 0.0 19.468360734468853 10.810935890735216 10.810935890735216 34.952910799509134 0 0.3494850021680094 2.0 0.4247425010840047 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM 3.4833 - 117 + 1 1.605 44509.8 1.0 4571 5283 9850 HBL1_DMSO_200M_050219_1,9856 HBL1_DMSO_200M_050219_1,9856,HPTTMSVLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9857 51.445 260.0 524120.0 25 0 81143.0 + 32344 RYPDSILEH 9 105 565.2851549409711 1128.555756948742 2 565.2853271365166 MULTI CID FTMS 0 0 0 9850 345156.90625 0.0606959302447756 -4 0.2666397094726562 7 Unmodified _RYPDSILEH_ ENSG00000104738|ENST00000649973|MCM4 70.33199760932243 0.0209706178985989 3 [YR][DP]S{I|L}{I|L}EH 9 0 + 82.839 0.0 0.0 7.3403 7.3403 94.771 0.0 0.0 0.0 19.523941263431723 69.65516844648083 19.523941263431723 21.79129463237757 0 2.1747425010840047 1.154901959985743 0.6861818737241735 0.3807196863200844 + + [YR][DP]S{I|L}{I|L}EH;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RD]S{I|L}{I|L}EH;[YR][DP]S{I|L}[QP][PG];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RD]S{I|L}[QP][PG] 7.3403;5.4094;3.5501;1.6192 +;-;-;- + 139 1 1.605 109792.8 1.0 4572 5283 9850 HBL1_DMSO_200M_050219_1,9857 HBL1_DMSO_200M_050219_1,9857,RYPDSILEH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9858 51.448 161.0 766870.0 25 0 77039.0 + 16996 KIYEGQVEV 9 117 532.7849061537099 1063.5552593742198 2 532.7850829958916 MULTI CID FTMS 0 0 0 9850 325475.78125 0.0053750764911307 -4 0.2666397094726562 8 Unmodified _KIYEGQVEV_ ENSG00000122406|ENST00000370321|RPL5;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 82.5293158979368 0.0169039238599547 3 [K{I|L}]YEGQVEV 9 0 + 75.958 0.0 0.0 7.1419 7.1419 81.707 0.0 0.0 0.0 1.572880170965533 16.056915063104654 1.572880170965533 1.572880170965533 0 1.305462187404089 0.9208187539523752 0.9947026752325154 0.805462187404089 + + [K{I|L}]YEGQVEV;[AG]GEY[K{I|L}]VEV;{[QG]|[NA]}EY[K{I|L}]VEV;[K{I|L}]YEG[AG]VEV;{[HG]|PP}P{I|L}EGQVEV;[YE]GQ[K{I|L}]VEV;[YE][K{I|L}]GQVEV;[AG]GEYV[K{I|L}]EV;[AG]GEVY[K{I|L}]EV;{[QG]|[NA]}EVY[K{I|L}]EV 7.1419;6.994;6.5896;6.2761;5.933;5.6895;5.6779;5.5956;5.5956;5.4077 +;-;-;-;-;-;-;-;-;- + 1200 1 1.605 107513.2 1.0 4573 5283 9850 HBL1_DMSO_200M_050219_1,9858 HBL1_DMSO_200M_050219_1,9858,KIYEGQVEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9859 51.45 116.0 732140.0 25 0 134970.0 + 24386 MFPEHAVKAY 10 112 398.1987997273793 1191.574569782338 3 398.5330688357353 MULTI CID FTMS 0 0 0 9850 273946.28125 0.4753203022606216 8 -0.7506179809570312 9 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 24.020572477871973 0.4289996903560794 3 [EP]HAVKA 7 3 18.937 0.0 0.0 1.5893 0.0 0.0 0.0 456.16025130479073 456.16025130479073 4.333070834201894 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + [EP]HAVKA 1.5893 + + 208 1 1.605 70766.4 1.0 4574 5283 9850 HBL1_DMSO_200M_050219_1,9859 HBL1_DMSO_200M_050219_1,9859,MFPEHAVKAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9860 51.457 356.0 430940.0 25 0 38205.0 + 3579 DAAFTYHHI 9 146 537.7534348064706 1073.4923166797412 2 537.7542602419853 MULTI CID FTMS 0 0 0 9850 211101.125 0.2456689584785596 -2 0.16650390625 10 Unmodified _DAAFTYHHI_ chr5:169840852-169934652|48|17.27|0.78|4.47|+|ENST00000519628|DOCK2,DOCK2;ENSG00000134516|ENST00000520908|DOCK2;ENST00000520836.5_1_5:169174421-169268422:+|nuORF;ENST00000523351.5_1_5:169188379-169509859:+|nuORF;nc|ENSG00000134516|Q92608-2|DOCK2 70.71552829651908 0.0208223590022201 3 {[DA]|[EG]}A{M(Oxidation (M))|F}TYHH{I|L} 9 0 + 83.95 0.0 0.0 7.8203 7.8203 89.858 0.0 0.0 0.0 19.9118525584814 6.462636538200158 6.462636538200158 6.462636538200158 0 1.0 1.6989700043360187 1.079689690656103 0.0 + + {[DA]|[EG]}A{M(Oxidation (M))|F}TYHH{I|L};{[DA]|[EG]}A{M(Oxidation (M))|F}TYH{I|L}H;{[DA]|[EG]}A{M(Oxidation (M))|F}TY[C(Carbamidomethyl (C))K]V;{[DA]|[EG]}A[QP]ADHH{I|L};{[DA]|[EG]}A[HK]{M(Oxidation (M))|F}EAW;{[DA]|[EG]}A{M(Oxidation (M))|F}T[KG]{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F};{[DA]|[EG]}A[QP]ADH{I|L}H;{[DA]|[EG]}A{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}ACH{I|L};{[DA]|[EG]}A{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}ACH{I|L};{[DA]|[EG]}A[HK]E{M(Oxidation (M))|F}AW 7.8203;7.2182;6.0594;5.2396;5.113;4.8118;4.6376;4.6111;4.1453;4.1035 +;-;-;-;-;-;-;-;-;- + 1644 + 1 1.605 118671.9 1.0 4575 5283 9850 HBL1_DMSO_200M_050219_1,9860 HBL1_DMSO_200M_050219_1,9860,DAAFTYHHI True True DAAFTYHHI 51.45657 537.754260241985 5940552.0 9850.0 ENST00000523351.5_1_5:169188379-169509859:+|nuORF;;nc|ENSG00000134516|Q92608-2|DOCK2;;ENSG00000134516|ENST00000520908|DOCK2;;chr5:169840852-169934652|48|17.27|0.78|4.47|+|ENST00000519628|DOCK2,DOCK2;;ENST00000520836.5_1_5:169174421-169268422:+|nuORF 7.663449128468831 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9862 51.461 43.0 1614500.0 25 0 300920.0 + 24226 MALGSDPRV 9 87 473.24500517596135 944.4754574187228 2 473.2443420290947 MULTI CID FTMS 0 0 0 9861 1335467.375 0.9926367115457694 2 -0.1712799072265625 1 Unmodified _MALGSDPRV_ ENSG00000150977|ENST00000280571|RILPL2 27.628801355627647 0.1796483985696185 3 MA{I|L}G 4 5 49.769 0.0 0.0 5.2695 0.0 0.0 0.0 569.2711275690061 569.2711275690061 35.50434735867583 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + MA{I|L}G 5.2695 + + 186 + 1 1.605 57465.4 1.0 4576 5284 9861 HBL1_DMSO_200M_050219_1,9862 HBL1_DMSO_200M_050219_1,9862,MALGSDPRV False True MALGSDPRV 51.461049 473.244342029095 27681770.0 9861.0 ENSG00000150977|ENST00000280571|RILPL2 7.988943735758464 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9863 51.464 118.0 571950.0 25 0 108420.0 + 38863 TVISEDSVVKA 11 74 574.3134592585188 1146.6123655838376 2 574.3134033083916 MULTI CID FTMS 0 0 0 9861 559461.875 0.3296618511347151 2 -0.1712799072265625 2 Unmodified _TVISEDSVVKA_ ENSG00000102384|ENST00000682095|CENPI;nc|ENSG00000102384|Q92674-2|CENPI 29.43715596616401 0.4010092210691691 3 {[TV]|[{I|L}S]}{I|L}SED[VS]V[KA] 11 0 + 61.687 0.0 0.0 5.3799 5.3799 87.802 0.0 0.0 0.0 50.260173194945104 12.301373021504354 12.301373021504354 14.389829401986155 0 0.4247425010840047 2.0 0.4247425010840047 0.7742275032520141 + + {[TV]|[{I|L}S]}{I|L}SED[VS]V[KA];{[TV]|[{I|L}S]}{I|L}SED[VS][KG]{I|L} 5.3799;4.1249 +;- + 85 + 1 1.605 58174.3 1.0 4577 5284 9861 HBL1_DMSO_200M_050219_1,9863 HBL1_DMSO_200M_050219_1,9863,TVISEDSVVKA False True TVISEDSVVKA 51.463524 574.313403308392 18411528.0 9861.0 ENSG00000102384|ENST00000682095|CENPI;;nc|ENSG00000102384|Q92674-2|CENPI 7.556296030680339 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9864 51.465 70.0 1430400.0 25 0 531270.0 -1 0 99 359.17029541973375 358.16301895313376 1 359.1700317263603 MULTI CID FTMS 0 0 0 9861 1201408.625 1.0 0 0.0 3 3 C(Carbamidomethyl (C)) 1 -1 0.71334 0.0 0.0 0.19917 0.0 0.0 66.03171509746814 129.07142053775627 195.1031356352244 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.19917 - 6 + 1 1.605 82624.8 1.0 4578 5284 9861 HBL1_DMSO_200M_050219_1,9864 HBL1_DMSO_200M_050219_1,9864, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9865 51.467 67.0 686140.0 25 0 27624.0 + + 10865 KVVDVEEQQL 10 86 593.8193642222167 1185.6241755112333 2 593.8196899294853 MULTI CID FTMS 0 0 0 9861 687348.75 1.0 0 0.0 4 Unmodified _GAELESLLNQL_ nc|ENSG00000012048|P38398-7|BRCA1;nc|ENSG00000012048|P38398-4|BRCA1;nc|ENSG00000012048|P38398-3|BRCA1;nc|ENSG00000012048|P38398-5|BRCA1;nc|ENSG00000012048|P38398-8|BRCA1;ENSG00000012048|ENST00000357654|BRCA1;nc|ENSG00000012048|P38398-6|BRCA1 38.17557092003332 0.2405003631267018 3 {[QV]|[N{I|L}]|[RA]|[KV]}VDVEEQ[Q{I|L}] 10 -1 + 41.524 0.0 0.0 3.5023 3.5023 73.557 0.0 0.0 0.0 1.700270517828436 21.150351049929803 1.700270517828436 3.339895132853435 0 0.0 0.0 0.4247425010840047 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}VDVEEQ[Q{I|L}];[AG]{I|L}{[TV]|[{I|L}S]}VEEQ[Q{I|L}];{[QN]|[E{I|L}]|[KN]}[KA]VEEQ[Q{I|L}];[AG]S{I|L}{I|L}VEEQ[Q{I|L}];[Q{I|L}]{[TV]|[{I|L}S]}VEEQ[Q{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}VDVEE[AG][Q{I|L}];{[QS]|[NT]}{I|L}{I|L}VEEQ[Q{I|L}];[AG]{I|L}{[TV]|[{I|L}S]}VEE[AG][Q{I|L}];{[QN]|[E{I|L}]|[KN]}[KA]VEE[AG][Q{I|L}];[AG]S{I|L}{I|L}VEE[AG][Q{I|L}] 3.5023;3.2206;3.1143;2.9667;2.8604;2.7293;2.6065;2.4507;2.3413;2.1968 -;-;-;-;-;-;-;-;-;- 172 1 1.605 42266.5 1.0 4579 5284 9861 HBL1_DMSO_200M_050219_1,9865 HBL1_DMSO_200M_050219_1,9865,GAELESLLNQL False False KVVDVEEQQL 51.466795 593.819689929485 3977240.25 9861.0 nc|ENSG00000012048|P38398-7|BRCA1;;nc|ENSG00000012048|P38398-4|BRCA1;;nc|ENSG00000012048|P38398-3|BRCA1;;nc|ENSG00000012048|P38398-5|BRCA1;;nc|ENSG00000012048|P38398-8|BRCA1;;ENSG00000012048|ENST00000357654|BRCA1;;nc|ENSG00000012048|P38398-6|BRCA1 7.043963432312012 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9866 51.469 95.0 892410.0 25 0 68362.0 + 33555 SILRHVAEV 9 91 512.3009318792416 1022.5873108252832 2 512.3009521365166 MULTI CID FTMS 0 0 0 9861 621502.375 0.4581060317923634 -1 0.0286483764648437 5 Unmodified _SILRHVAEV_ ENSG00000134001|ENST00000256383|EIF2S1 57.24910588100465 0.0276051374632116 3 {[TV]|[{I|L}S]}{I|L}RHVAEV 9 0 + 73.14 0.0 0.0 7.1524 7.1524 94.926 0.0 0.0 0.0 20.737862141609185 55.55995451676745 20.737862141609185 35.51538440272459 0 1.7231975075880328 2.0 0.3054621874040891 0.0 + + {[TV]|[{I|L}S]}{I|L}RHVAEV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]HV[W{I|L}];{[NV]|[RG]}KKHVAEV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]H[W{I|L}]V;{[NV]|[RG]}KKHC[VP]V 7.1524;3.6793;3.6562;3.5627;0.7947 +;-;-;-;- + 191 1 1.605 69384.5 1.0 4580 5284 9861 HBL1_DMSO_200M_050219_1,9866 HBL1_DMSO_200M_050219_1,9866,SILRHVAEV True True SILRHVAEV 51.46888 512.300952136517 21034187.0 9861.0 ENSG00000134001|ENST00000256383|EIF2S1 5.198678652445476 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9867 51.472 131.0 1002700.0 25 0 71163.0 + 19965 LIGNKIRI 8 144 309.5431460850609 925.6076088553828 3 309.5427734255791 MULTI CID FTMS 0 0 0 9861 517805.71875 1.0 0 0.0 6 Unmodified _LIGNKIRI_ REV__ENSG00000205560|ENST00000312108|CPT1B;REV__nc|ENSG00000205560|Q92523-2|CPT1B;REV__nc|ENSG00000205560|Q92523-3|CPT1B;REV__nc|ENSG00000205560|Q92523-4|CPT1B 32.116972079565 0.368454113111938 3 {I|L}{[NV]|[RG]}KA{I|L}R{I|L} 8 -1 + 43.286 0.0 0.0 4.6765 4.6765 71.448 0.0 0.0 0.0 21.414412723804546 12.118188526518724 12.118188526518724 0.1722032235195314 0 0.3494850021680094 0.0 0.0 1.1989700043360187 {I|L}{[NV]|[RG]}KA{I|L}R{I|L};{I|L}[NG]{I|L}K{I|L}R{I|L};{I|L}{[NV]|[RG]}AK{I|L}R{I|L};{I|L}{[NV]|[RG]}KAR{I|L}{I|L};{I|L}[NG]{I|L}KR{I|L}{I|L};{I|L}{[NV]|[RG]}AKR{I|L}{I|L};{I|L}[NG]{I|L}{I|L}KR{I|L};{I|L}{[NV]|[RG]}A{I|L}KR{I|L} 4.6765;4.6579;4.3327;4.2572;4.2386;3.9133;3.7649;3.4397 -;-;-;-;-;-;-;- 151 + 1 1.605 107345.5 1.0 4581 5284 9861 HBL1_DMSO_200M_050219_1,9867 HBL1_DMSO_200M_050219_1,9867,LIGNKIRI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9868 51.475 186.0 621570.0 25 0 69588.0 14143 IAYYAMGFDW 10 112 412.8509341800186 1235.5309731402558 3 412.8509399294853 MULTI CID FTMS 0 0 0 9861 315679.28125 0.7129733328891544 -1 0.0286483764648437 7 Unmodified _IAYYAMGFDW_ ENSG00000169508|ENST00000376414|GPR183 14.40537977576856 0.6058337302021266 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GVYC 7 7 45.038 0.0 0.0 3.6452 0.0 0.0 0.0 463.1663240526184 463.1663240526184 29.38576603460107 0.0 0.0 0.0 0 0.5 2.0 1.045114016114533 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GVYC 3.6452 - 413 1 1.605 92959.7 1.0 4582 5284 9861 HBL1_DMSO_200M_050219_1,9868 HBL1_DMSO_200M_050219_1,9868,IAYYAMGFDW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9869 51.485 560.0 436190.0 25 0 39124.0 + 22368 LPSPSPRI 8 175 433.758365890012 865.502178846824 2 433.7583801150322 MULTI CID FTMS 0 0 0 9861 222606.0625 0.4806005778357492 -2 0.0998611450195312 8 Unmodified _LPSPSPRI_ ENSG00000160410|ENST00000291842|SHKBP1 61.357469665136826 0.1155423183535659 3 {I|L}PSPSRP{I|L} 8 2 + 69.977 0.0 0.0 8.0852 8.0852 92.039 0.0 0.0 0.0 47.48776277874399 8.320553378447357 8.320553378447357 8.553172051959422 0 1.0924778212679485 1.6989700043360187 0.6747425010840047 0.2742275032520141 {I|L}PSPSRP{I|L};{I|L}PSPSR{I|L}P;{I|L}PPSSRP{I|L};{I|L}PSP[RP]S{I|L};{I|L}PSP[RP]TV;{I|L}PPSSR{I|L}P;{I|L}PSP[R{I|L}]SP;{I|L}PPS[RP]S{I|L};{I|L}PS{I|L}[RP]SP;{I|L}P{I|L}S[RP]SP 8.0852;7.0969;6.8988;6.6465;5.9945;5.9106;5.8223;5.4601;5.3891;4.8378 -;-;-;-;-;-;-;-;-;- 420 + 1 1.605 188470.0 1.0 4583 5284 9861 HBL1_DMSO_200M_050219_1,9869 HBL1_DMSO_200M_050219_1,9869,LPSPSPRI True True LPSPSPRI 51.484949 433.758380115032 7558474.5 9861.0 ENSG00000160410|ENST00000291842|SHKBP1 2.116689999898275 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9870 51.49 264.0 516280.0 25 0 28852.0 + 39652 VEAPLHDLID 10 142 561.2938538034821 1120.573154673764 2 561.2940551638603 MULTI CID FTMS 0 0 0 9861 224182.75 0.1123584862338047 3 -0.2947540283203125 9 Unmodified _VEAPLHDLID_ REV__ENSG00000086696|ENST00000199936|HSD17B2;REV__ENST00000566838.2_3_16:82131651-82132038:+|nuORF 22.736283301280096 0.4578556481593033 3 VEAV 4 -1 33.576 0.0 0.0 2.9964 0.0 0.0 0.0 719.3314303033811 719.3314303033811 -0.3431811792050609 0.0 -0.3431811792050609 0.0 0 0.6677353201839438 0.7958800173440752 0.4247425010840047 0.0 VEAV 2.9964 - 813 + 1 1.605 103917.9 1.0 4584 5284 9861 HBL1_DMSO_200M_050219_1,9870 HBL1_DMSO_200M_050219_1,9870,VEAPLHDLID False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9871 51.497 391.0 280400.0 25 0 27209.0 -1 HNVICKTSV 9 133 529.274793448068 1056.5350339629358 2 529.7780029177666 MULTI CID FTMS 0 0 0 9861 201948.28125 0.1284237244739181 -2 0.0998611450195312 10 Carbamidomethyl (C) _HNVIC(Carbamidomethyl (C))KTSV_ ENSG00000179796|ENST00000396641|LRRC3B 21.74664581756881 0.2544899275067181 3 [HN]{I|L}{I|L}R[NG]AY 9 -1 + 23.618 0.0 0.0 2.2354 2.2354 67.311 0.0 0.0 0.0 0.7378621416091882 2.719832914713969 0.7378621416091882 0.9370405245622528 0 0.0 0.0 0.0 0.3494850021680094 [HN]{I|L}{I|L}R[NG]AY;[TP]AV[HK][NG]AY;[TP]AK[HV][NG]AY;[TP]AVC(Carbamidomethyl (C))V[WK]P;[TP]AVC(Carbamidomethyl (C))V[NP]TV;[TP]AVC(Carbamidomethyl (C))[WK]PV;[TP]AVC(Carbamidomethyl (C))V{[QS]|[NT]}PV;[TP]AVC(Carbamidomethyl (C))V[NP]S{I|L};[HN]{I|L}{I|L}R[NS]{[CT]|[{M(Oxidation (M))|F}G]};[TP]AVC(Carbamidomethyl (C))[WK]VP 2.2354;2.1467;1.723;1.1551;1.1544;0.96278;0.84452;0.70277;0.6019;0.53689 -;-;-;-;-;-;-;-;-;- 1223 + 1 1.605 94057.5 1.0 4585 5284 9861 HBL1_DMSO_200M_050219_1,9871 HBL1_DMSO_200M_050219_1,9871,HNVICKTSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9872 51.511 800.0 149110.0 25 0 13788.0 + 11061 GDYTADKLRP 10 139 568.2923222326187 1134.5700915320374 2 568.2925292849541 MULTI CID FTMS 0 0 0 9861 182056.53125 1.0 0 0.0 11 Unmodified _GDYTADKLRP_ REV__ENSG00000003393|ENST00000264276|ALS2;REV__ENST00000482891.5_1_2:202587756-202633608:-|nuORF 19.256988751693697 0.5244284437930726 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG{I|L}PR 10 -1 + 49.553 0.0 0.0 4.3675 4.3675 71.787 0.0 0.0 0.0 7.269987279362624 0.8715017571890087 0.8715017571890087 0.8715017571890087 0 0.0 0.0 0.7614393726401688 0.2887254899964357 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG{I|L}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG{I|L}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STGGG{I|L}RP;[{M(Oxidation (M))|F}V][MT]TNG{I|L}PR;[{M(Oxidation (M))|F}V][MT]TNG{I|L}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG[RP]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STN{[QV]|[N{I|L}]|[RA]|[KV]}VP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}S[KT][{M(Oxidation (M))|F}V]Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STN{[QV]|[N{I|L}]|[RA]|[KV]}PV 4.3675;4.2907;3.5598;3.483;2.3494;2.2726;2.2059;2.1881;2.0479;2.0214 -;-;-;-;-;-;-;-;-;- 782 + 1 1.605 94307.1 0.8600000143051147 4586 5284 9861 HBL1_DMSO_200M_050219_1,9872 HBL1_DMSO_200M_050219_1,9872,GDYTADKLRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9873 51.516 293.0 272570.0 25 0 15499.0 + 8184 EPSAGIPKV 9 130 449.2556621971133 896.4967714610267 2 449.2558776736259 MULTI CID FTMS 0 0 0 9861 143673.203125 0.7002792790000333 2 -0.1712799072265625 12 Unmodified _EPSAGIPKV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 10.073929032068715 0.563993802247229 3 [EP]{[SA]|[TG]}{[VA]|[{I|L}G]}PKV 9 0 + 16.321 0.0 0.0 1.8206 1.8206 75.396 0.0 0.0 0.0 3.222281142179217 9.212046717774529 3.222281142179217 7.403626894942434 0 0.0 0.7958800173440752 0.0 0.0 + + [EP]{[SA]|[TG]}{[VA]|[{I|L}G]}PKV;[EP][VS]AAPKV 1.8206;0.99472 +;- + 134 + 1 1.605 67983.1 1.0 4587 5284 9861 HBL1_DMSO_200M_050219_1,9873 HBL1_DMSO_200M_050219_1,9873,EPSAGIPKV False True EPSAGIPKV 51.516044 449.255877673626 3089536.75 9861.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 5.875001271565755 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9874 51.53 800.0 230960.0 25 0 18573.0 + 43892 YFSETQHSL 9 189 556.2548388760149 1110.4951248188297 2 556.2549316287041 MULTI CID FTMS 0 0 0 9861 138001.984375 1.0 0 0.0 13 Unmodified _YFSETQHSL_ ENSG00000186130|ENST00000373659|ZBTB6 51.629811660486645 0.0367964933207742 3 Y{M(Oxidation (M))|F}SETQHTV 9 2 + 45.021 0.0 0.0 4.0542 4.0542 69.976 0.0 0.0 0.0 16.47817481888637 0.4275198042095027 0.4275198042095027 0.4275198042095027 0 0.3494850021680094 0.0 1.336696871556164 0.3054621874040891 Y{M(Oxidation (M))|F}SETQHTV;Y{M(Oxidation (M))|F}SETQHS{I|L};Y{M(Oxidation (M))|F}[WM]QHTV;Y{M(Oxidation (M))|F}[WM]QHS{I|L};Y{M(Oxidation (M))|F}SET[AG]HTV;Y{M(Oxidation (M))|F}SET[AG]HS{I|L};Y{M(Oxidation (M))|F}SETQ{[TV]|[{I|L}S]}H;Y{M(Oxidation (M))|F}SETTHQV;Y{M(Oxidation (M))|F}SETTHN{I|L};Y{M(Oxidation (M))|F}S[{M(Oxidation (M))|F}T]QRY 4.0542;4.0157;3.4208;3.3823;2.9499;2.9114;2.8463;2.4541;2.4156;2.3486 -;+;-;-;-;-;-;-;-;- + 1508 + 1 1.605 143429.6 0.7599999904632568 4588 5284 9861 HBL1_DMSO_200M_050219_1,9874 HBL1_DMSO_200M_050219_1,9874,YFSETQHSL True True YFSETQHSL 51.529878 556.254931628704 1452262.875 9861.0 ENSG00000186130|ENST00000373659|ZBTB6 6.305921713511149 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9876 51.534 19.0 2470100.0 25 0 569630.0 + 12413 GTITTFEHA 9 69 488.7403848540344 975.4662167748688 2 488.7405883669853 MULTI CID FTMS 0 0 0 9875 3301537.75 0.316663437564592 3 -0.3073577880859375 1 Unmodified _GTITTFEHA_ ENSG00000167658|ENST00000309311|EEF2 46.020951573049366 0.0490941689151868 3 {[SA]|[TG]}{I|L}TT{M(Oxidation (M))|F}E[HA] 9 0 + 66.929 0.0 0.0 6.8612 6.8612 93.816 0.0 0.0 0.0 38.94250423175906 5.737862141609185 5.737862141609185 26.00833760139686 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.0 + + {[SA]|[TG]}{I|L}TT{M(Oxidation (M))|F}E[HA];{[SA]|[TG]}{I|L}TT[C(Carbamidomethyl (C))Q][VP];{[SA]|[TG]}{I|L}T{[QC]|[C(Carbamidomethyl (C))A]}{[SA]|[TG]}[VP];{[SA]|[TG]}[VP]C(Carbamidomethyl (C))T[WR];{[SA]|[TG]}{I|L}T{[QC]|[C(Carbamidomethyl (C))A]}[PG]{[TV]|[{I|L}S]};{[YC]|[HE]}[HV]TT[RP];{[SA]|[TG]}[VP][CG]T[WR];[KP]EC(Carbamidomethyl (C))T[WR] 6.8612;4.1949;2.6847;2.6722;2.2767;1.9461;1.7227;0.8442 +;-;-;-;-;-;-;- + 157 + 1 1.609 43839.1 1.0 4589 5285 9875 HBL1_DMSO_200M_050219_1,9876 HBL1_DMSO_200M_050219_1,9876,GTITTFEHA True True GTITTFEHA 51.53439 488.740588366985 103597784.0 9875.0 ENSG00000167658|ENST00000309311|EEF2 8.064318974812826 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9877 51.537 103.0 858000.0 25 0 141600.0 + 31905 RTVEKTWKL 9 109 387.5642097546696 1159.670799864209 3 387.5643493533134 MULTI CID FTMS 0 0 0 9875 454793.21875 0.340424214530335 3 -0.3073577880859375 2 Unmodified _RTVEKTWKL_ ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-2|CBLB;nc|ENSG00000114423|Q13191-3|CBLB 27.128809495255545 0.1860100384555814 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEKTWK{I|L} 9 0 + 57.744 0.0 0.0 4.9793 4.9793 75.185 0.0 0.0 0.0 3.591444694250683 14.973024840566469 3.591444694250683 1.7609125905568137 0 1.6861818737241734 0.0 0.0 0.25 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEKTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EVKTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTRTWK{I|L};{[WT]|[RM]}VVKTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEKT{[SA]|[TG]}R{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EVKT{[SA]|[TG]}R{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VT[VG]TWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTRT{[DA]|[EG]}K{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTRT{[SA]|[TG]}R{I|L};{[WT]|[RM]}VVKT{[DA]|[EG]}K{I|L} 4.9793;4.8275;4.7197;4.6696;4.1655;4.0137;3.9257;3.9257;3.906;3.8756 +;-;-;-;-;-;-;-;-;- + 504 1 1.609 72619.9 1.0 4590 5285 9875 HBL1_DMSO_200M_050219_1,9877 HBL1_DMSO_200M_050219_1,9877,RTVEKTWKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9878 51.538 50.0 1357300.0 25 0 121250.0 + 3635 DAEAKFREI 9 79 539.7798716685817 1077.5451904039633 2 539.7802001833916 MULTI CID FTMS 0 0 0 9875 1761105.125 0.5672581077273513 -1 0.0733413696289062 3 Unmodified _DAEAKFREI_ ENSG00000128590|ENST00000249356|DNAJB9;ENST00000465725.1_1_7:108212170-108215134:+|nuORF;ENST00000491582.1_1_7:108210452-108212392:+|nuORF 38.61474834105838 0.0830609365873449 3 DAEAK{M(Oxidation (M))|F}[W{I|L}]V 9 3 + 74.536 0.0 0.0 6.9172 6.9172 94.787 0.0 0.0 0.0 49.84305011473481 0.915149811213496 0.915149811213496 52.90730039024169 0 1.3494850021680094 1.6989700043360187 0.5 0.0 DAEAK{M(Oxidation (M))|F}[W{I|L}]V;{[QN]|[E{I|L}]|[KN]}[HA]{I|L}KA[C(Carbamidomethyl (C))H];{[CP]|[EA]}[H{I|L}]{I|L}KA[C(Carbamidomethyl (C))H];WERR[MT]TV;D[RD]K{I|L}[MT]TV;[KA]{[WT]|[RM]}HH{I|L}W 6.9172;2.0072;1.9337;1.7468;1.2803;0.54417 -;-;-;-;-;- 126 + 1 1.609 59214.6 1.0 4591 5285 9875 HBL1_DMSO_200M_050219_1,9878 HBL1_DMSO_200M_050219_1,9878,DAEAKFREI True True DAEAKFREI 51.537925 539.780200183392 39763331.75 9875.0 ENST00000465725.1_1_7:108212170-108215134:+|nuORF;;ENST00000491582.1_1_7:108210452-108212392:+|nuORF;;ENSG00000128590|ENST00000249356|DNAJB9 3.9877216815948486 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9879 51.539 55.0 1476500.0 25 0 169990.0 + 21475 LPHPGLKV 8 90 430.7712989811264 859.5280450290528 2 430.7711974978447 MULTI CID FTMS 0 0 0 9875 1244952.875 0.5522415924411455 -4 0.26849365234375 4 Unmodified _LPHPGLKV_ ENSG00000119787|ENST00000378954|ATL2;ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2;nc|ENSG00000198513|Q8WXF7-2|ATL1 56.541270873467816 0.1144128637334507 3 {I|L}PHPG{I|L}KV 8 0 + 56.904 0.0 0.0 6.6204 6.6204 78.591 0.0 0.0 0.0 44.42979712652914 5.1329657522032335 5.1329657522032335 0.5237875363565792 0 1.3539171939081172 1.5228787452803376 0.0 0.0 + + {I|L}PHPG{I|L}KV;{I|L}PHV[PA]KV;{I|L}PVH[PA]KV;{I|L}PHV[K{I|L}][PG];{I|L}PVH[K{I|L}][PG];{I|L}[{I|L}T]K{[WT]|[RM]}V 6.6204;6.5594;5.3648;4.6355;3.4408;1.5196 +;-;-;-;-;- + 247 + 1 1.609 69951.9 1.0 4592 5285 9875 HBL1_DMSO_200M_050219_1,9879 HBL1_DMSO_200M_050219_1,9879,LPHPGLKV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9880 51.541 95.0 1751800.0 25 0 234890.0 + 33557 SILRHVAEV 9 132 341.8697531944433 1022.58743018353 3 341.8696166872978 MULTI CID FTMS 0 0 0 9875 743592.0625 1.0 0 0.0 5 Unmodified _SILRHVAEV_ ENSG00000134001|ENST00000256383|EIF2S1 31.26834338654808 0.1333407332142048 3 {[TV]|[{I|L}S]}[R{I|L}]HVAEV 9 0 + 62.949 0.0 0.0 6.1559 6.1559 84.82 0.0 0.0 0.0 18.065658918089653 48.96977168525439 18.065658918089653 6.020599913279625 0 0.0 2.0 0.805462187404089 0.0 + + {[TV]|[{I|L}S]}[R{I|L}]HVAEV;{[TV]|[{I|L}S]}[R{I|L}]HAVEV;[HV][R{I|L}]TVAEV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}KH[W{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}KHV[W{I|L}];[HV][R{I|L}]TAVEV;[HV][R{I|L}]ATVEV;[KG][VG]KHVAEV;[HV]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TVEV;{[VA]|[{I|L}G]}[RH]{I|L}TVEV 6.1559;5.5671;3.9059;3.3974;3.3974;3.3171;3.0227;2.601;2.5561;2.2228 +;-;-;-;-;-;-;-;-;- + 361 1 1.609 138406.7 1.0 4593 5285 9875 HBL1_DMSO_200M_050219_1,9880 HBL1_DMSO_200M_050219_1,9880,SILRHVAEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9881 51.545 201.0 753770.0 25 0 68572.0 + 4973 DGRLVINRV 9 132 347.8771041953408 1040.6094831862224 3 347.8767883181572 MULTI CID FTMS 0 0 0 9875 511769.6875 0.164178453589892 -2 0.10198974609375 6 Unmodified _DGRLVINRV_ ENSG00000032389|ENST00000382125|EIPR1;ENST00000496433.5_1_2:3193107-3197993:-|nuORF 30.7034409873982 0.1405282614900322 3 DRG{I|L}V{I|L}VNR 9 4 + 57.666 0.0 0.0 5.5416 5.5416 84.233 0.0 0.0 0.0 45.19219209867005 8.293229309825222 8.293229309825222 7.385606273598313 0 1.274227503252014 0.0 0.0 0.2614393726401688 DRG{I|L}V{I|L}VNR;DRG{I|L}VV{I|L}NR;DRG{I|L}V{I|L}VGGR;DR[R{I|L}]{I|L}VA[QA];DRG{I|L}VV{I|L}GGR;DR[R{I|L}]V{I|L}A[QA];DRG{I|L}V[RP][KT];D[VG][R{I|L}]{I|L}VNR;D[VG][R{I|L}]V{I|L}NR 5.5416;4.8319;4.6567;4.0635;3.947;3.3538;3.2784;3.1704;2.4606 -;-;-;-;-;-;-;-;- 190 + 1 1.609 132521.2 1.0 4594 5285 9875 HBL1_DMSO_200M_050219_1,9881 HBL1_DMSO_200M_050219_1,9881,DGRLVINRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9882 51.55 279.0 725140.0 25 0 25168.0 + 29251 QGYRMPRV 8 188 336.17999758999485 1005.5181633701844 3 336.1796142458916 MULTI CID FTMS 0 0 0 9875 448870.875 0.7478703929323411 1 -0.0979385375976562 7 Unmodified _QGYRMPRV_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 22.736283301280096 0.5659792798204337 3 QVGD[HV]VW 8 7 40.72 0.0 0.0 4.0497 0.0 0.0 0.0 82.06693445377186 82.06693445377186 10.794134586871529 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 QVGD[HV]VW 4.0497 - 757 + 1 1.609 160909.9 1.0 4595 5285 9875 HBL1_DMSO_200M_050219_1,9882 HBL1_DMSO_200M_050219_1,9882,QGYRMPRV False True QGYRMPRV 51.550357 336.1801 12689174.0 9875.0 nc|ENSG00000254087|P07948-2|LYN;;ENSG00000254087|ENST00000519728|LYN -0.513264536857605 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9883 51.563 719.0 256660.0 25 0 10974.0 -1 LDCRNVDRNVL 11 164 687.349059133806 1372.683565334412 2 687.3489868044853 MULTI CID FTMS 0 0 0 9875 304761.1875 0.6046572273664561 -1 0.0733413696289062 8 Carbamidomethyl (C) _LDC(Carbamidomethyl (C))RNVDRNVL_ ENST00000289968.10_1_16:24930781-24931099:-|nuORF;ENST00000537417.1_16:24930737-24931099:-|nuORF 36.506200033944 0.2662161991516171 3 {[TV]|[{I|L}S]}KDDPSQSANV{I|L} 13 -1 + 120.77 0.0 0.0 8.7979 8.7979 93.388 0.0 0.0 0.0 15.353360985128475 16.642078980768062 15.353360985128475 9.07245946763102 0 1.9447638809191463 1.6989700043360187 2.4049471895720984 0.75 {[TV]|[{I|L}S]}KDDPSQSANV{I|L};{[TV]|[{I|L}S]}KDDPS[AG]SANV{I|L};{[TV]|[{I|L}S]}KDDPSQSAGGV{I|L};{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PPSQSANV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KS]DPSQSANV{I|L};[VG]G[{M(Oxidation (M))|F}T]PPSQSANV{I|L};{[TV]|[{I|L}S]}KDDPS[AG]SAGGV{I|L};[VG]S{[TV]|[{I|L}S]}DPSQSANV{I|L};{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PPS[AG]SANV{I|L};{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PPSQSAGGV{I|L} 8.7979;8.137;8.137;8.0341;7.6794;7.5124;7.4777;7.4304;7.3732;7.3732 -;-;-;-;-;-;-;-;-;- 40904 1 1.609 131057.3 1.0 4596 5285 9875 HBL1_DMSO_200M_050219_1,9883 HBL1_DMSO_200M_050219_1,9883,LDCRNVDRNVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9884 51.576 731.0 495400.0 25 0 39717.0 + 22189 LPQEIQSRV 9 238 535.3045693493552 0 535.3030883669853 PEAK CID FTMS 0 0 0 9875 304884.46875 1.0 0 0.0 9 Unmodified _LPQEIQSRV_ ENSG00000006194|ENST00000219069|ZNF263 49.52724829834842 0.0329615201929619 3 PQE{I|L}Q 5 4 47.964 0.0 0.0 4.4885 0.0 0.0 113.0851962675118 357.18964563541255 470.2748419029243 0.0 0.0 0.0 0.0 0 1.3411290632962718 0.0 0.7614393726401688 0.3494850021680094 + PQE{I|L}Q 4.4885 + + 836 + 1 1.609 277953.5 1.0 4597 5285 9875 HBL1_DMSO_200M_050219_1,9884 HBL1_DMSO_200M_050219_1,9884,LPQEIQSRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9885 51.589 800.0 393410.0 25 0 54761.0 + 45970 YYYPKQQGL 9 179 580.2931032810219 1158.5716536288437 2 580.2922241091728 MULTI CID FTMS 0 0 0 9875 220015.875 0.5144102284846824 -1 0.0733413696289062 10 Unmodified _YYYPKQQGL_ ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-1|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-23|TAF1;nc|ENSG00000147133|P21675-24|TAF1;nc|ENSG00000147133|P21675-25|TAF1;nc|ENSG00000147133|P21675|TAF1 77.98433622928108 0.0180125044636492 3 YYYPKQQG{I|L} 9 0 + 82.851 0.0 0.0 7.1512 7.1512 89.613 0.0 0.0 0.0 25.880704491920184 8.129133566428564 8.129133566428564 8.129133566428564 0 0.6861818737241735 2.0 0.0 1.1989700043360187 + + YYYPKQQG{I|L};YYYPKQQAV;YYYPKQ[AG]G{I|L};YYYPK[AG]QG{I|L};YYYPK[EP]S{I|L};YYYPRRE{I|L};YYYPK[AG]QAV;YYYPKQ[AG]AV;YYYPK[EP]TV;YYYPK[{I|L}A]NQ 7.1512;6.4495;6.3564;6.3564;6.3057;6.0888;5.6547;5.6547;5.6041;5.3584 +;-;-;-;-;-;-;-;-;- + 3407 + 1 1.609 232875.6 0.9399999976158142 4598 5285 9875 HBL1_DMSO_200M_050219_1,9885 HBL1_DMSO_200M_050219_1,9885,YYYPKQQGL True True YYYPKQQGL 51.589355 580.292224109173 2677004.25 9875.0 ENSG00000147133|ENST00000423759|TAF1;;nc|ENSG00000147133|P21675-18|TAF1;;nc|ENSG00000147133|P21675-21|TAF1;;nc|ENSG00000147133|P21675-1|TAF1;;nc|ENSG00000147133|P21675-19|TAF1;;nc|ENSG00000147133|P21675-17|TAF1;;nc|ENSG00000147133|P21675-16|TAF1;;nc|ENSG00000147133|P21675-25|TAF1;;nc|ENSG00000147133|P21675-23|TAF1;;nc|ENSG00000147133|P21675-15|TAF1;;nc|ENSG00000147133|P21675-13|TAF1;;nc|ENSG00000147133|P21675|TAF1;;nc|ENSG00000147133|P21675-22|TAF1;;nc|ENSG00000147133|P21675-20|TAF1;;nc|ENSG00000147133|P21675-24|TAF1 6.33506965637207 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9886 51.595 281.0 727120.0 25 0 87122.0 + -1 ETIMQSAIKEA 11 131 618.8100126667222 1235.6054724002445 2 618.8076660037041 MULTI CID FTMS 0 0 0 9875 204081.4375 1.0 0 0.0 11 Oxidation (M) _ETIM(Oxidation (M))QSAIKEA_ REV__ENSG00000138663|ENST00000264389|COPS4 15.248480904072842 0.7179608125786238 3 [{I|L}T]E{[MG]|[TS]}SM 7 -1 23.816 0.0 0.0 1.9275 0.0 0.0 0.0 483.276528879013 483.276528879013 4.307648603777988 0.0 0.0 0.0 0 0.4247425010840047 1.0969100130080565 0.805462187404089 0.0 [{I|L}T]E{[MG]|[TS]}SM 1.9275 - 991 1 1.609 151956.0 1.0 4599 5285 9875 HBL1_DMSO_200M_050219_1,9886 HBL1_DMSO_200M_050219_1,9886,ETIMQSAIKEA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9887 51.608 800.0 800240.0 25 0 64659.0 37276 TIPESLRVQ 9 233 521.7977765470363 0 521.7958251833916 PEAK CID FTMS 0 0 0 9875 154879.25 0.6330541912600173 -5 0.3254623413085937 12 Unmodified _TIPESLRVQ_ ENSG00000100154|ENST00000397906|TTC28 27.628801355627647 0.1319135480000405 3 DN{I|L}V{I|L} 5 7 17.652 0.0 0.0 1.6947 0.0 0.0 100.0398771508713 384.1999605768188 484.2398377276901 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 DN{I|L}V{I|L} 1.6947 - 864 + 1 1.609 483313.3 0.8199999928474426 4600 5285 9875 HBL1_DMSO_200M_050219_1,9887 HBL1_DMSO_200M_050219_1,9887,TIPESLRVQ False True YYVNRDTL 51.608367 521.795825183392 9601482.0 9875.0 ENSG00000135372|ENST00000257829|NAT10;;nc|ENSG00000135372|Q9H0A0-2|NAT10 4.566998640696208 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9888 51.624 800.0 234820.0 25 0 17249.0 + 11253 GESLKLKV 8 164 437.273790600952 872.533028268704 2 437.2743713259697 MULTI CID FTMS 0 0 0 9875 162933.203125 0.6974361989233061 -1 0.0733413696289062 13 Unmodified _GESLKLKV_ ENSG00000143155|ENST00000367833|TIPRL;nc|ENSG00000143155|O75663-2|TIPRL 62.57269311338072 0.1158273023829763 3 DASK{I|L}{I|L}KV 8 4 + 82.866 0.0 0.0 9.4972 9.4972 93.269 0.0 0.0 0.0 8.17024086827658 8.17024086827658 8.17024086827658 8.17024086827658 0 2.385151878060192 1.6989700043360187 0.0 0.2742275032520141 DASK{I|L}{I|L}KV;{[DA]|[EG]}SK{I|L}{I|L}KV;DASK{I|L}{I|L}VK;DAV[KT]{I|L}KV;DAV[KT]{I|L}VK;{[SA]|[TG]}DK{I|L}{I|L}KV;VAD[KT]{I|L}KV;[KS]{I|L}{[DA]|[EG]}{I|L}KV;VAD[KT]{I|L}VK;[K{I|L}]S{[DA]|[EG]}{I|L}KV 9.4972;8.5608;8.4616;8.3826;7.347;6.6504;5.9637;5.1729;4.9281;4.8864 -;-;-;-;-;-;-;-;-;- 581 + 1 1.609 148417.5 0.6899999976158142 4601 5285 9875 HBL1_DMSO_200M_050219_1,9888 HBL1_DMSO_200M_050219_1,9888,GESLKLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9889 51.628 237.0 358130.0 25 0 37350.0 + 32347 RYPDSILEH 9 97 377.1928057540807 1128.5565878624425 3 377.1927978396416 MULTI CID FTMS 0 0 0 9875 159803.40625 0.340340437007613 -3 0.1732025146484375 14 Unmodified _RYPDSILEH_ ENSG00000104738|ENST00000649973|MCM4 41.8396318013385 0.0653578398400075 3 S{I|L}{I|L}EH 5 4 42.167 0.0 0.0 3.7364 0.0 0.0 531.2458711649798 0.0 531.2458711649798 0.0 31.889401073715344 0.0 0.0 0 1.0 0.0 0.5 0.0 + S{I|L}{I|L}EH 3.7364 + + 118 + 1 1.609 74275.4 1.0 4602 5285 9875 HBL1_DMSO_200M_050219_1,9889 HBL1_DMSO_200M_050219_1,9889,RYPDSILEH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9891 51.632 8.9 5229500.0 25 0 700110.0 + 41943 VQIEEVRQV 9 51 550.3086874421073 1098.6028219510144 2 550.3091308474541 MULTI CID FTMS 0 0 0 9890 6220438.5 0.854063649068841 1 -0.12347412109375 1 Unmodified _VQIEEVRQV_ ENSG00000143621|ENST00000361891|ILF2 45.739877483867886 0.0497104363764649 3 {I|L}EEVRE 6 4 55.411 0.0 0.0 5.0438 0.0 0.0 227.1251387760895 113.07259546451404 340.19773424060355 0.0 0.0 0.0 0.0 0 1.8494850021680087 0.0 0.5 0.7302046884880937 {I|L}EEVRE 5.0438 - 58 + 1 1.609 47289.7 1.0 4603 5286 9890 HBL1_DMSO_200M_050219_1,9891 HBL1_DMSO_200M_050219_1,9891,VQIEEVRQV True True VQIEEVRQV 51.632329 550.309130847454 87091280.0 9890.0 ENSG00000143621|ENST00000361891|ILF2 6.154872099558513 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9892 51.634 14.0 2990200.0 25 0 187350.0 + 16835 KIAPNTPQL 9 81 491.2911931750197 980.5678334168394 2 491.2901794314384 MULTI CID FTMS 0 0 0 9890 3447246.5 0.914596656429152 1 -0.12347412109375 2 Unmodified _KIAPNTPQL_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 39.94969957227396 0.0757326808254658 3 {[QN]|[E{I|L}]|[KN]}P[{I|L}A]TPQ{I|L} 9 4 + 38.79 0.0 0.0 3.9559 3.9559 71.317 0.0 0.0 0.0 1.3033376849500655 7.10795294801266 1.3033376849500655 1.3033376849500655 0 0.7429928190999391 1.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}P[{I|L}A]TPQ{I|L};[QP]SA[K{I|L}]PQ{I|L};[QP]SRRPQ{I|L};[TP]NA[K{I|L}]PQ{I|L};[TP]NRRPQ{I|L};{[QN]|[E{I|L}]|[KN]}[RK][WH]{I|L} 3.9559;3.823;3.6489;2.9405;2.7665;1.1437 -;-;-;-;-;- 288 1 1.609 38359.3 1.0 4604 5286 9890 HBL1_DMSO_200M_050219_1,9892 HBL1_DMSO_200M_050219_1,9892,KIAPNTPQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9893 51.635 12.0 1659300.0 25 0 109460.0 + 21129 LPAPPTQNM 9 57 484.7473525872371 0 484.7473327517509 PEAK CID FTMS 0 0 0 9890 4539352.5 1.0 0 0.0 3 Unmodified _LPAPPTQNM_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 24.67388899826682 0.1587009629985955 3 N 1 8 8.2268 0.0 0.0 0.85034 0.0 0.0 704.3859577606087 146.02874170474846 850.4146994653571 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + N 0.85034 + + 5 + 1 1.609 25168.3 1.0 4605 5286 9890 HBL1_DMSO_200M_050219_1,9893 HBL1_DMSO_200M_050219_1,9893,LPAPPTQNM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9894 51.636 13.0 2304400.0 25 0 337360.0 + 22010 LPPPPPPAM 9 58 458.7515933437354 915.4886337542708 2 458.7518493533134 MULTI CID FTMS 0 0 0 9890 3596705.5 0.5139101080907034 -8 0.5858306884765625 4 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 45.7499826716795 0.0496882803020414 3 [YK]{I|L}PP[PA]M 8 4 [YK]{I|L} + + 29.693 4.437 1.0976 3.2434 3.2434 50.647 0.0 0.0 0.0 0.0 22.703037561203843 0.0 0.0 0 1.5 0.0 0.0 0.0 [YK]{I|L}PP[PA]M 3.2434 - 53 + 1 1.609 27295.6 1.0 4606 5286 9890 HBL1_DMSO_200M_050219_1,9894 HBL1_DMSO_200M_050219_1,9894,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9895 51.637 31.0 2854600.0 25 0 639670.0 + 45898 YYSPHGHIL 9 95 362.8504324454907 1085.529467936672 3 362.8502380251884 MULTI CID FTMS 0 0 0 9890 1693893.125 0.7613536612005156 1 -0.12347412109375 5 Unmodified _YYSPHGHIL_ ENSG00000144895|ENST00000460851|EIF2A;nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A 26.34127834903884 0.1960301806784604 3 YYSPH 5 4 40.713 0.0 0.0 3.7506 0.0 0.0 0.0 435.2379244440063 435.2379244440063 19.03089986991944 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + YYSPH 3.7506 + + 159 + 1 1.609 74644.7 1.0 4607 5286 9890 HBL1_DMSO_200M_050219_1,9895 HBL1_DMSO_200M_050219_1,9895,YYSPHGHIL False True YYSPHGHIL 51.637043 362.850238025188 48295062.0 9890.0 nc|ENSG00000144895|Q9BY44-2|EIF2A;;nc|ENSG00000144895|Q9BY44-4|EIF2A;;nc|ENSG00000144895|Q9BY44-3|EIF2A;;ENSG00000144895|ENST00000460851|EIF2A 9.20712184906006 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9896 51.638 50.0 2620200.0 25 0 442340.0 + 4975 DGRLVINRV 9 100 521.3125315957924 1040.6105102583847 2 521.3121215701103 MULTI CID FTMS 0 0 0 9890 793063.5 0.9463299797541276 -1 0.0979385375976562 6 Unmodified _DGRLVINRV_ ENSG00000032389|ENST00000382125|EIPR1;ENST00000496433.5_1_2:3193107-3197993:-|nuORF 27.088373467376528 0.1865245257266215 3 VDN{I|L}V{I|L}[RN]V 9 3 + 61.666 0.0 0.0 5.9259 5.9259 80.192 0.0 0.0 0.0 6.817496819840656 5.404205291875961 5.404205291875961 3.010299956639805 0 1.579689690656103 0.0 0.3807196863200844 0.0 VDN{I|L}V{I|L}[RN]V;VDN{I|L}V{I|L}{[NV]|[RG]}GV;VDN{I|L}V{I|L}{[NV]|[RG]}R;DVN{I|L}V{I|L}[RN]V;VDGG{I|L}V{I|L}[RN]V;DVN{I|L}V{I|L}{[NV]|[RG]}GV;VDGG{I|L}V{I|L}{[NV]|[RG]}GV;DVN{I|L}V{I|L}{[NV]|[RG]}R;VDGG{I|L}V{I|L}{[NV]|[RG]}R;DVGG{I|L}V{I|L}[RN]V 5.9259;5.6366;5.4066;5.2708;5.041;4.9815;4.7559;4.7514;4.5217;4.3859 -;-;-;-;-;-;-;-;-;- 138 + 1 1.609 105875.9 1.0 4608 5286 9890 HBL1_DMSO_200M_050219_1,9896 HBL1_DMSO_200M_050219_1,9896,DGRLVINRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9897 51.641 121.0 1170700.0 25 0 108540.0 + 32148 RVQDEDMETL 10 115 618.2827119155672 1234.5508708979344 2 618.2827636599541 MULTI CID FTMS 0 0 0 9890 483209.78125 0.8408657918918869 -1 0.0979385375976562 7 Unmodified _RVQDEDMETL_ ENSG00000165525|ENST00000298310|NEMF;ENST00000556925.5_1_14:50264161-50281481:-|nuORF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF 43.9818466556824 0.1155196613165264 3 [{I|L}T]EMG[NP]MET{I|L} 11 7 + 70.984 0.0 0.0 5.7498 5.7498 83.342 0.0 0.0 0.0 9.99214827082544 14.190166918179628 9.99214827082544 5.78396073130169 0 0.8807196863200843 1.2218487496163564 0.8494850021680094 0.805462187404089 [{I|L}T]EMG[NP]MET{I|L};[{I|L}T]E{[{M(Oxidation (M))|F}H]|[RQ]}DMET{I|L};[{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}EDMET{I|L};[{I|L}A][WQ]EDMET{I|L};[{I|L}T]EMN[PG]MET{I|L};[{I|L}T]EMG[NP]MTE{I|L};[{I|L}T]EMGG[PG]MET{I|L};[DP]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}C(Carbamidomethyl (C))MET{I|L};{[ET]|[MV]}{I|L}MG[NP]MET{I|L};[{I|L}T]E{[{M(Oxidation (M))|F}H]|[RQ]}DMTE{I|L} 5.7498;5.2813;5.1201;4.9404;4.9062;4.7925;4.7893;4.7723;4.477;4.324 -;-;-;-;-;-;-;-;-;- 2063 1 1.609 109147.4 1.0 4609 5286 9890 HBL1_DMSO_200M_050219_1,9897 HBL1_DMSO_200M_050219_1,9897,RVQDEDMETL True True RVQDEDMETL 51.640889 618.282763659954 14461140.0 9890.0 nc|ENSG00000165525|O60524-4|NEMF;;nc|ENSG00000165525|O60524-5|NEMF;;ENSG00000165525|ENST00000298310|NEMF;;ENST00000556925.5_1_14:50264161-50281481:-|nuORF;;nc|ENSG00000165525|O60524-3|NEMF 6.867914358774821 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9898 51.643 81.0 1010400.0 25 0 118090.0 + 12907 GYHTGYYM 8 112 496.2025058594285 990.3904587856572 2 496.2024413943291 MULTI CID FTMS 0 0 0 9890 460710.15625 1.0 0 0.0 8 Unmodified _GYHTGYYM_ ENSG00000172062|ENST00000380707|SMN1;ENSG00000205571|ENST00000380743|SMN2;ENST00000509805.5_1_5:69363243-69366626:+|nuORF;ENST00000518504.5_1_5:70238322-70242051:+|nuORF;nc|ENSG00000205571|Q16637-2|SMN1;nc|ENSG00000205571|Q16637-3|SMN1;nc|ENSG00000205571|Q16637-4|SMN1 52.69307289633392 0.1265801145616722 3 [HT]GYGYYM 8 4 + 40.544 0.0 0.0 4.0937 4.0937 82.557 0.0 0.0 0.0 2.607215860603702 25.05932705901364 2.607215860603702 10.272861173562674 0 1.1069758080123702 0.0 0.6109243748081782 0.0 [HT]GYGYYM;[HT]GYYGYM;[PA]A[{M(Oxidation (M))|F}E]YYM;[HT][YN]YYM;[HT]GYY{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]};[PA]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}CYYM 4.0937;3.0565;2.8546;2.7691;1.8774;1.0716 -;-;-;-;-;- 625 1 1.609 69496.6 1.0 4610 5286 9890 HBL1_DMSO_200M_050219_1,9898 HBL1_DMSO_200M_050219_1,9898,GYHTGYYM True True GYHTGYYM 51.642725 496.2037 2966438.0 9890.0 ENSG00000205571|ENST00000380743|SMN2;;nc|ENSG00000205571|Q16637-2|SMN1;;nc|ENSG00000205571|Q16637-4|SMN1;;nc|ENSG00000205571|Q16637-3|SMN1;;ENSG00000172062|ENST00000380707|SMN1;;ENST00000518504.5_1_5:70238322-70242051:+|nuORF;;ENST00000509805.5_1_5:69363243-69366626:+|nuORF 5.905431906382243 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9899 51.647 229.0 601750.0 25 0 51247.0 -1 MDNITRQNQFY 11 101 744.3308271408575 1486.647101348515 2 744.3311645388603 MULTI CID FTMS 0 0 0 9890 455227.1875 0.7753265817071665 -1 0.0979385375976562 9 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 3 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 83.8 0.0 0.0 5.6368 5.6368 83.445 0.0 0.0 0.0 6.468805527816016 10.255855770477211 6.468805527816016 6.289850105233299 0 0.7742275032520141 0.958607314841775 0.3494850021680094 1.524227503252014 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[DA]|[EG]}E{I|L}{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}W{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[DA]|[EG]}E{I|L}{I|L}C[NS]QNA{M(Oxidation (M))|F}Y 5.6368;5.2138;5.2017;5.0637;5.0604;5.0266;5.0266;5.0266;4.8662;4.7967 -;-;-;-;-;-;-;-;-;- 3939 1 1.609 100148.3 1.0 4611 5286 9890 HBL1_DMSO_200M_050219_1,9899 HBL1_DMSO_200M_050219_1,9899,MDNITRQNQFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9900 51.651 220.0 422700.0 25 0 62259.0 + 35640 SVATGAVRY 9 102 462.2511230340386 922.4876931348772 2 462.2508727908134 MULTI CID FTMS 0 0 0 9890 309722.0625 0.5697337185859396 -1 0.0979385375976562 10 Unmodified _SVATGAVRY_ REV__ENSG00000162729|ENST00000314485|IGSF8;REV__nc|ENSG00000162729|Q969P0-3|IGSF8 27.628801355627647 0.1796483985696185 3 [VS]ATG{M(Oxidation (M))|F} 6 -1 56.515 0.0 0.0 6.1264 0.0 0.0 0.0 357.1898592584594 357.1898592584594 43.23999200117029 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 [VS]ATG{M(Oxidation (M))|F} 6.1264 - 737 + 1 1.609 73634.2 1.0 4612 5286 9890 HBL1_DMSO_200M_050219_1,9900 HBL1_DMSO_200M_050219_1,9900,SVATGAVRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9901 51.656 256.0 556140.0 25 0 112250.0 13467 HLSSCSLC 8 111 425.1850973278951 848.3556417225902 2 425.1853210330009 MULTI CID FTMS 0 0 0 9890 311463.03125 0.4903183590725271 -1 0.0979385375976562 11 Unmodified _HLSSCSLC_ ENST00000261813.8_1_5:139624899-139625277:-|nuORF 9.347437153973935 0.7675937258251505 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M 3 8 23.033 0.0 0.0 2.715 0.0 0.0 0.0 439.1737624103434 439.1737624103434 7.296962438796147 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.4247425010840047 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M 2.715 - 84 1 1.609 114393.1 1.0 4613 5286 9890 HBL1_DMSO_200M_050219_1,9901 HBL1_DMSO_200M_050219_1,9901,HLSSCSLC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9902 51.659 171.0 428130.0 25 0 46779.0 30140 QVLTQRLQGL 10 93 385.900750772348 1154.680422917244 3 385.9001037478447 MULTI CID FTMS 0 0 0 9890 250278.90625 1.0 0 0.0 12 Unmodified _QVLTQRLQGL_ ENSG00000249115|ENST00000203166|HAUS5;ENST00000585968.5_1_19:36103696-36110661:+|nuORF;ENST00000587439.5_1_19:36108795-36110661:+|nuORF 8.444304893310646 0.6875766406947869 3 DQG 3 8 13.188 0.0 0.0 1.1421 0.0 0.0 769.4815531436096 82.06703363590077 851.5485867795104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DQG 1.1421 - 93 + 1 1.609 62803.3 1.0 4614 5286 9890 HBL1_DMSO_200M_050219_1,9902 HBL1_DMSO_200M_050219_1,9902,QVLTQRLQGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9903 51.673 800.0 334710.0 25 0 32605.0 15160 IPALKGHSL 9 215 468.2873106052168 934.5600682772337 2 468.2867614626884 MULTI CID FTMS 0 0 0 9890 221714.375 0.7412273567289989 -3 0.1999282836914062 13 Unmodified _IPALKGHSL_ ENST00000243298.2_1_X:103080673-103087036:-|nuORF 34.40172386719151 0.1061884637610825 3 {I|L}PA{I|L}[YV]{M(Oxidation (M))|F}{I|L} 8 4 + 60.355 0.0 0.0 6.4581 6.4581 77.116 0.0 0.0 0.0 15.42796583575644 0.189549981487076 0.189549981487076 0.0012252678340018 0 1.0 1.3979400086720375 0.0 0.0 {I|L}PA{I|L}[YV]{M(Oxidation (M))|F}{I|L};{I|L}PAP[TA][RP]{I|L};{I|L}PAP[TA][R{I|L}]P;{I|L}P[PG]VS[RP]{I|L};[VP]VV[YV]{M(Oxidation (M))|F}{I|L};{I|L}P[PG]V[RP]TV;{I|L}P[PG]V[RP]S{I|L};{I|L}P[PG]VS[R{I|L}]P;[VP]VPAS[RP]{I|L};[VP]PAVS[RP]{I|L} 6.4581;6.4579;5.3189;4.2878;3.5215;3.4551;3.4551;3.1488;2.7783;2.0398 -;-;-;-;-;-;-;-;-;- 720 + 1 1.609 207108.3 0.9900000095367432 4615 5286 9890 HBL1_DMSO_200M_050219_1,9903 HBL1_DMSO_200M_050219_1,9903,IPALKGHSL True False LPAPPARTL 51.673102 468.286761462688 5137372.5 9890.0 ENSG00000143630|ENST00000368358|HCN3 4.470317681630452 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9904 51.687 800.0 480630.0 25 0 67525.0 + 43866 YFMQEAKRM 9 187 401.859192021407 1202.5557466644211 3 401.8595458865166 MULTI CID FTMS 0 0 0 9890 198539.828125 0.8047825426609423 -1 0.0979385375976562 14 Unmodified _YFMQEAKRM_ ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3 49.52724829834842 0.0414064571532091 3 Y{M(Oxidation (M))|F}MQEAKMR 9 2 + 82.576 0.0 0.0 6.8667 6.8667 85.25 0.0 0.0 0.0 16.478174818886387 4.290080713764723 4.290080713764723 4.290080713764723 0 0.3494850021680094 0.0 0.7302046884880937 1.09669816197406 Y{M(Oxidation (M))|F}MQEAKMR;Y{M(Oxidation (M))|F}MQEAKRM;YM{M(Oxidation (M))|F}QEAKMR;Y{M(Oxidation (M))|F}M[AG]EAKMR;YM{M(Oxidation (M))|F}QEAKRM;Y{M(Oxidation (M))|F}MQEAKTSV;Y{M(Oxidation (M))|F}M[AG]EAKRM;YM{M(Oxidation (M))|F}[AG]EAKMR;Y{M(Oxidation (M))|F}MQEAKTVS;YM{M(Oxidation (M))|F}QEAKTSV 6.8667;6.51;6.3258;6.101;5.969;5.861;5.7442;5.56;5.4838;5.32 -;+;-;-;-;-;-;-;-;- + 1375 + 1 1.609 294717.1 0.8299999833106995 4616 5286 9890 HBL1_DMSO_200M_050219_1,9904 HBL1_DMSO_200M_050219_1,9904,YFMQEAKRM True True YFMQEAKRM 51.686916 401.859545886517 1671156.875 9890.0 nc|ENSG00000144218|P51826-2|AFF3;;ENSG00000144218|ENST00000672756|AFF3 7.2444078127543134 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9905 51.7 783.0 242100.0 25 0 10046.0 + -1 KCPDKLDGC 9 210 546.7434667874452 1091.4723806416905 2 546.7439453005791 MULTI CID FTMS 0 0 0 9890 182741.109375 1.0 0 0.0 15 2 Carbamidomethyl (C) _KC(Carbamidomethyl (C))PDKLDGC(Carbamidomethyl (C))_ REV__ENSG00000149651|ENST00000279058|SPINT4 26.88365393820708 0.1891292719743517 3 M{I|L}{M(Oxidation (M))|F}VHQV 7 -1 27.337 0.0 0.0 2.5046 0.0 0.0 219.0315369911028 0.0 219.0315369911028 0.0 9.814718271103764 0.0 0.0 0 0.3252574989159953 0.0 0.0 1.295114016114533 M{I|L}{M(Oxidation (M))|F}VHQV 2.5046 - 2423 + 1 1.609 148854.6 1.0 4617 5286 9890 HBL1_DMSO_200M_050219_1,9905 HBL1_DMSO_200M_050219_1,9905,KCPDKLDGC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9906 51.714 800.0 68025.0 25 0 3002.1 + 14501 IGLPLDGQRRQ 11 109 626.8617431521416 0 626.8617431521416 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _IGLPLDGQRRQ_ REV__ENST00000397412.7_1_16:1725816-1726149:+|nuORF 10.073929032068715 0.4495801685015257 3 AW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}V 6 -1 15.027 0.0 0.0 1.2005 0.0 0.0 260.1492602099905 210.16237817935783 470.31163838934833 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 AW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}V 1.2005 - 114 + 1 1.609 47269.7 0.9900000095367432 4618 5286 9890 HBL1_DMSO_200M_050219_1,9906 HBL1_DMSO_200M_050219_1,9906,IGLPLDGQRRQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9907 51.718 114.0 452740.0 25 0 23869.0 -1 NCHVNVMEV 9 89 559.2414610349783 1116.4683691367566 2 559.7429077029228 MULTI CID FTMS 0 0 0 9890 170462.84375 0.4618837448714733 -1 0.0979385375976562 17 Carbamidomethyl (C),Oxidation (M) _NC(Carbamidomethyl (C))HVNVM(Oxidation (M))EV_ ENSG00000046889|ENST00000288368|PREX2;ENST00000517617.1_1_8:68864752-69023167:+|nuORF;nc|ENSG00000046889|Q70Z35-4|PREX2 4.75600775471527 0.7486543447549536 3 {NN|[MP]|[D{I|L}]|[EV]}DD[WQ]VQV 9 -1 {NN|[MP]|[D{I|L}]|[EV]}DD[WQ]VQ + + 11.783 2.993 0.29949 1.0554 1.0554 48.378 0.0 0.0 0.0 0.0 -6.633638461478441 -6.633638461478441 0.0 0 0.0 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}DD[WQ]VQV 1.0554 - 37 + 1 1.609 46453.4 1.0 4619 5286 9890 HBL1_DMSO_200M_050219_1,9907 HBL1_DMSO_200M_050219_1,9907,NCHVNVMEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9908 51.732 800.0 214740.0 25 0 14493.0 + -1 LSCCSGWSV 9 209 499.7054839353837 997.3964149375674 2 499.7050964236259 MULTI CID FTMS 0 0 0 9890 167751.9375 1.0 0 0.0 18 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))CSGWSV_ REV__ENST00000288943.4_1_2:96809359-96809716:-|nuORF 11.640296217721598 0.521594087909532 3 {[QG]|[NA]}{M(Oxidation (M))|F} 3 -1 16.351 0.0 0.0 1.6394 0.0 0.0 0.0 662.2602204397737 662.2602204397737 0.405754010833494 0.0 0.0 0.0 0 0.3807196863200844 0.2596373105057561 0.0 0.25 {[QG]|[NA]}{M(Oxidation (M))|F} 1.6394 - 931 1 1.609 127340.0 0.959999978542328 4620 5286 9890 HBL1_DMSO_200M_050219_1,9908 HBL1_DMSO_200M_050219_1,9908,LSCCSGWSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9909 51.746 800.0 148330.0 25 0 11077.0 8564 ETLNKALDLQ 10 165 572.8124794759656 1143.610406018731 2 572.8128539919853 MULTI CID FTMS 0 0 0 9890 165158.171875 1.0 0 0.0 19 Unmodified _ETLNKALDLQ_ ENSG00000168026|ENST00000683103|TTC21A;nc|ENSG00000168026|Q8NDW8-5|TTC21A;nc|ENSG00000168026|Q8NDW8-6|TTC21A;nc|ENSG00000168026|Q8NDW8-7|TTC21A;nc|ENSG00000168026|Q8NDW8|TTC21A 34.221707139014875 0.2185845369562963 3 [VS]PSSKGS{I|L} 9 9 59.543 0.0 0.0 5.2066 0.0 0.0 0.0 298.13640233017605 298.13640233017605 30.450872935890526 0.0 0.0 0.0 0 1.0 1.5228787452803376 2.049184897636096 0.0 [VS]PSSKGS{I|L} 5.2066 - 7088 1 1.609 93184.1 0.959999978542328 4621 5286 9890 HBL1_DMSO_200M_050219_1,9909 HBL1_DMSO_200M_050219_1,9909,ETLNKALDLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9910 51.752 246.0 395430.0 25 0 70288.0 + 39853 VFHAGTAL 8 128 408.2235644806906 0 408.2239868044853 PEAK CID FTMS 0 0 0 9890 145316.953125 0.3617219443833382 -1 0.0979385375976562 20 Unmodified _VFHAGTAL_ ENSG00000159131|ENST00000381815|GART;ENST00000424203.5_1_21:34876433-34900844:-|nuORF;nc|ENSG00000159131|P22102-2|GART 38.99230528602208 0.1497007738166924 3 TGAV 4 6 24.781 0.0 0.0 3.0428 0.0 0.0 202.12887837368743 281.10520349674067 483.2340818704281 0.0 0.0 0.0 0.0 0 0.5 0.0 0.5 0.0 TGAV 3.0428 - 165 + 1 1.609 80061.4 1.0 4622 5286 9890 HBL1_DMSO_200M_050219_1,9910 HBL1_DMSO_200M_050219_1,9910,VFHAGTAL False True VFHAGTAL 51.751572 408.223986804485 3247524.25 9890.0 nc|ENSG00000159131|P22102-2|GART;;ENST00000424203.5_1_21:34876433-34900844:-|nuORF;;ENSG00000159131|ENST00000381815|GART 6.8535950978597 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9912 51.756 0.96 43982000.0 25 0 4560500.0 + 15852 ISNEFKVEV 9 76 532.7849061537099 1063.5552593742198 2 532.7855102419853 MULTI CID FTMS 0 0 0 9911 60552772.0 1.0 0 0.0 1 Unmodified _ISNEFKVEV_ ENSG00000171603|ENST00000377298|CLSTN1;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;nc|ENSG00000171603|O94985-2|CLSTN1 36.12702656103203 0.0967173616627612 3 {[QG]|[NA]}EY[K{I|L}]VEV 9 4 + 51.132 0.0 0.0 4.8076 4.8076 79.925 0.0 0.0 0.0 3.65279269351241 36.5815315012393 3.65279269351241 5.563025007672877 0 0.8494850021680094 0.0 0.3494850021680094 0.4247425010840047 {[QG]|[NA]}EY[K{I|L}]VEV;[YE][K{I|L}]GQVEV;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}Y[K{I|L}]EV;{[QG]|[NA]}EYV[K{I|L}]EV;{[QG]|[NA]}EVY[K{I|L}]EV;[YE]{[QG]|[NA]}[K{I|L}]VEV;[YE][K{I|L}]G[AG]VEV;[YE][KQ]{[VA]|[{I|L}G]}VEV;[YE]{[QG]|[NA]}V[K{I|L}]EV;[YE][KQ]R{I|L}EV 4.8076;4.2846;4.0382;3.9596;3.9596;3.5362;3.4188;2.879;2.6883;2.1698 -;-;-;-;-;-;-;-;-;- 160 1 1.597 42265.4 1.0 4623 5287 9911 HBL1_DMSO_200M_050219_1,9912 HBL1_DMSO_200M_050219_1,9912,ISNEFKVEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9913 51.757 13.0 3773600.0 25 0 274400.0 + 3565 DAAAKALRI 9 69 464.7825154223925 927.5504779115852 2 464.7824279665947 MULTI CID FTMS 0 0 0 9911 3287224.25 0.4399446285749503 1 -0.0859451293945312 2 Unmodified _DAAAKALRI_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 39.94969957227396 0.0757326808254658 3 DAAAKA{I|L}[R{I|L}] 9 0 + 77.502 0.0 0.0 8.3555 8.3555 90.274 0.0 0.0 0.0 73.52211747517542 3.65279269351241 3.65279269351241 6.020599913279625 0 1.2887254899964358 1.6989700043360187 0.0 0.0 + + DAAAKA{I|L}[R{I|L}];DAAAK{I|L}A[R{I|L}];DAAA{I|L}KA[R{I|L}];D{[NV]|[RG]}KA{I|L}[R{I|L}];WARRA[R{I|L}];D{[NV]|[RG]}K{I|L}A[R{I|L}];D{[NV]|[RG]}{I|L}KA[R{I|L}] 8.3555;7.7064;7.192;3.0503;2.8016;2.4012;1.8869 +;-;-;-;-;-;- + 118 + 1 1.597 44484.9 1.0 4624 5287 9911 HBL1_DMSO_200M_050219_1,9913 HBL1_DMSO_200M_050219_1,9913,DAAAKALRI True True DAAAKALRI 51.756984 464.782427966595 81931272.0 9911.0 nc|ENSG00000124214|O95793-2|STAU1;;nc|ENSG00000124214|O95793-3|STAU1;;ENSG00000124214|ENST00000371856|STAU1 6.332576751708984 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9914 51.758 10.0 5942700.0 25 0 965110.0 + 32345 RYPDSILEH 9 49 565.2851549409711 1128.555756948742 2 565.2855102419853 MULTI CID FTMS 0 0 0 9911 5686656.5 1.0 0 0.0 3 Unmodified _RYPDSILEH_ ENSG00000104738|ENST00000649973|MCM4 34.93206674587334 0.1032771302489716 3 [YR][DP]S{I|L}{I|L}EH 9 0 + 57.369 0.0 0.0 5.0834 5.0834 88.928 0.0 0.0 0.0 0.915149811213496 46.39969987625378 0.915149811213496 57.36880000633434 0 1.424742501084005 0.0 0.4247425010840047 0.0 + + [YR][DP]S{I|L}{I|L}EH 5.0834 + + 53 1 1.597 53082.7 1.0 4625 5287 9911 HBL1_DMSO_200M_050219_1,9914 HBL1_DMSO_200M_050219_1,9914,RYPDSILEH True True RYPDSILEH 51.758164 565.285510241985 200735476.0 9911.0 ENSG00000104738|ENST00000649973|MCM4 8.567265828450521 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9915 51.759 27.0 1471900.0 25 0 198840.0 + 42004 VQQDDNKQQ 9 48 551.7589325264194 1101.5033121196386 2 551.7585937380791 MULTI CID FTMS 0 0 0 9911 1944043.0 1.0 0 0.0 4 Unmodified _VQQDDNKQQ_ REV__nc|ENSG00000211810|P04437|TRAV29DV5 6.2057823575117 0.6980434486082533 3 VE 2 -1 23.711 0.0 0.0 2.1526 0.0 0.0 0.0 870.3696347573931 870.3696347573931 23.711375162600703 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 VE 2.1526 - 2 + 1 1.597 36586.5 1.0 4626 5287 9911 HBL1_DMSO_200M_050219_1,9915 HBL1_DMSO_200M_050219_1,9915,VQQDDNKQQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9916 51.761 41.0 1624900.0 25 0 229750.0 + 22412 LPTEQPRL 8 74 477.2744555772402 952.5343582212804 2 477.2744018435478 MULTI CID FTMS 0 0 0 9911 1601209.625 0.4565418248119666 1 -0.0859451293945312 5 Unmodified _LPTEQPRL_ ENSG00000102977|ENST00000620761|ACD;ENST00000602423.1_1_16:67693438-67694029:-|nuORF;ENST00000602622.5_1_16:67693438-67693558:-|nuORF;ENST00000602860.5_1_16:67693438-67694150:-|nuORF;ENST00000602945.5_1_16:67692675-67693876:-|nuORF;nc|ENSG00000102977|Q96AP0-2|ACD 25.399314129420983 0.5099049743284904 3 {I|L}PTEQ 5 3 61.454 0.0 0.0 6.4516 0.0 0.0 0.0 381.2262043705066 381.2262043705066 32.3952346750643 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}PTEQ 6.4516 + + 67 + 1 1.597 54654.4 1.0 4627 5287 9911 HBL1_DMSO_200M_050219_1,9916 HBL1_DMSO_200M_050219_1,9916,LPTEQPRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9917 51.762 20.0 2066800.0 25 0 251950.0 + + 11410 NQVEIKPEM 9 76 543.270605750448 1084.526658567696 2 544.2760497927666 MULTI CID FTMS 0 0 0 9911 1567587.5 0.909106000699842 -1 0.12347412109375 6 Unmodified _GGQPGKDWIQ_ ENSG00000115268|ENST00000592588|RPS15 14.838274106304384 0.5985701837916485 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}EV 7 -1 39.781 0.0 0.0 3.668 0.0 0.0 0.0 237.061048831346 237.061048831346 17.531055905197338 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}EV 3.668 - 130 1 1.597 38315.4 1.0 4628 5287 9911 HBL1_DMSO_200M_050219_1,9917 HBL1_DMSO_200M_050219_1,9917,GGQPGKDWIQ False False NQVEIKPEM 51.761699 544.276049792767 24349830.0 9911.0 ENSG00000115268|ENST00000592588|RPS15 6.69470739364624 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9918 51.763 51.0 729800.0 25 0 115930.0 + + -1 KYLTSNVAY 9 57 529.274793448068 1056.5350339629358 2 529.7803222537041 MULTI CID FTMS 0 0 0 9911 1171206.875 0.7447983616694368 1 -0.0859451293945312 7 Oxidation (M) _HNEVKVKGM(Oxidation (M))_ nc|ENSG00000125779|Q9BZ23-3|PANK2;PANK2|p.P376Tfs*3|1|0.41|ENSG00000125779|chr20:3910719-3910720|-/A|frameshift_variant;ENSG00000125779|ENST00000610179|PANK2;ENSG00000120137|ENST00000239231|PANK3;ENST00000495692.5_1_20:3869620-3891228:+|nuORF;nc|ENSG00000125779|Q9BZ23|PANK2 10.823927491677226 0.5436922275383211 3 [HN]V[{I|L}A][RN]AY 9 -1 + 33.886 0.0 0.0 3.2073 3.2073 82.985 0.0 0.0 0.0 26.18317473533317 16.478174818886377 16.478174818886377 33.88621229653702 0 0.0 0.0 0.0 0.7742275032520141 [HN]V[{I|L}A][RN]AY 3.2073 - 38 + 1 1.597 37016.3 1.0 4629 5287 9911 HBL1_DMSO_200M_050219_1,9918 HBL1_DMSO_200M_050219_1,9918,HNEVKVKGM False False KYLTSNVAY 51.763053 529.780322253704 20575820.0 9911.0 nc|ENSG00000125779|Q9BZ23-3|PANK2;;PANK2|p.P376Tfs*3|1|0.41|ENSG00000125779|chr20:3910719-3910720|-/A|frameshift_variant;;ENSG00000125779|ENST00000610179|PANK2;;ENSG00000120137|ENST00000239231|PANK3;;ENST00000495692.5_1_20:3869620-3891228:+|nuORF;;nc|ENSG00000125779|Q9BZ23|PANK2 5.880429108937581 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9919 51.765 108.0 592880.0 25 0 70083.0 + 27564 LPADTVQRI 9 81 506.2936941658803 1010.5728353985606 2 506.7934142947197 MULTI CID FTMS 0 0 0 9911 648364.625 0.4078090671393249 1 -0.0859451293945312 8 Unmodified _PLAQAQALVT_ nc|ENSG00000115919|Q16719-2|KYNU;ENSG00000115919|ENST00000264170|KYNU 11.640296217721598 0.652229146672156 3 PADTVQR{I|L} 8 7 33.384 0.0 0.0 3.3035 0.0 0.0 112.08457486276411 0.0 112.08457486276411 0.0 6.472995192892839 0.0 0.0 0 0.0 0.0 0.0 0.0 PADTVQR{I|L} 3.3035 - 288 + 1 1.597 56410.2 1.0 4630 5287 9911 HBL1_DMSO_200M_050219_1,9919 HBL1_DMSO_200M_050219_1,9919,PLAQAQALVT False False LPADTVQRI 51.765326 506.79341429472 8977754.0 9911.0 nc|ENSG00000115919|Q16719-2|KYNU;;ENSG00000115919|ENST00000264170|KYNU 5.433322429656982 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9920 51.767 81.0 1034400.0 25 0 97769.0 + 33275 SFPHTTPSM 9 123 502.7289256898901 1003.4432984465802 2 502.7289611697197 MULTI CID FTMS 0 0 0 9911 541146.5 0.5237884138589223 5 -0.5465469360351562 9 Unmodified _SFPHTTPSM_ ENSG00000197111|ENST00000546463|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 39.957323273325 0.0756908302845263 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM 8 4 + 60.225 0.0 0.0 6.0019 6.0019 90.524 0.0 0.0 0.0 20.03205960551832 16.40978057358332 16.40978057358332 19.00682754201746 0 0.3252574989159953 2.0 1.110924374808178 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NP][QP]PSM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HM][PA]PSM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NP]G[PA]PSM;[W{M(Oxidation (M))|F}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TVSM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]T{[MS]|[{M(Oxidation (M))|F}A]}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HM][HK]SM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NP][QP][WE];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NP]G[PA][WE];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[HG]|PP}{[QN]|[E{I|L}]|[KN]}[WE] 6.0019;4.1077;3.999;3.8077;3.7074;3.3954;3.2739;2.369;2.0636;1.5943 -;-;-;-;-;-;-;-;-;- 867 + 1 1.597 68038.5 1.0 4631 5287 9911 HBL1_DMSO_200M_050219_1,9920 HBL1_DMSO_200M_050219_1,9920,SFPHTTPSM True True SFPHTTPSM 51.767149 502.72896116972 53693752.0 9911.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 6.871883869171143 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9921 51.769 80.0 1093900.0 25 0 91180.0 + + -1 LPQEIQSRV 9 101 535.3147110352991 0 535.3140136599541 PEAK CID FTMS 0 0 0 9911 610306.5 1.0 0 0.0 10 Carbamidomethyl (C) _LPARVLC(Carbamidomethyl (C))AVA_ ENSG00000006194|ENST00000219069|ZNF263 11.640296217721598 0.3623705791714445 3 PQE{I|L}Q 5 -1 39.949 0.0 0.0 3.7383 0.0 0.0 113.10465438098238 357.1892489068969 470.2939032878793 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.7742275032520141 PQE{I|L}Q 3.7383 - 51 + 1 1.597 76630.0 1.0 4632 5287 9911 HBL1_DMSO_200M_050219_1,9921 HBL1_DMSO_200M_050219_1,9921,LPARVLCAVA False False LPQEIQSRV 51.768984 535.314013659954 7546021.5 9911.0 ENSG00000006194|ENST00000219069|ZNF263 7.252732276916504 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9922 51.771 120.0 906060.0 25 0 82125.0 39650 VEAKYQHA 8 126 473.24500517596135 944.4754574187228 2 473.2462036013603 MULTI CID FTMS 0 0 0 9911 502436.8125 0.3734551922839285 5 -0.5465469360351562 11 Unmodified _VEAKYQHA_ ENSG00000116748|ENST00000520113|AMPD1;nc|ENSG00000116748|P23109-2|AMPD1 28.486842064014134 0.4448922141344407 3 {[DS]|[MA]|[CV]|TT}{I|L}{[ET]|[MV]}{I|L}AN 8 7 31.578 0.0 0.0 3.3435 0.0 0.0 0.0 98.02540002994374 98.02540002994374 3.1398588264558214 0.0 0.0 0.0 0 0.75 1.3979400086720375 0.0 0.0 {[DS]|[MA]|[CV]|TT}{I|L}{[ET]|[MV]}{I|L}AN 3.3435 - 836 + 1 1.597 86907.1 1.0 4633 5287 9911 HBL1_DMSO_200M_050219_1,9922 HBL1_DMSO_200M_050219_1,9922,VEAKYQHA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9923 51.774 125.0 692720.0 25 0 80792.0 + 28935 QATPWLVWV 9 120 367.2025737637894 1098.5858918915685 3 367.2026855349541 MULTI CID FTMS 0 0 0 9911 351951.03125 1.0 0 0.0 12 Unmodified _QATPWLVWV_ REV__ENST00000432854.5_1_7:44103469-44103637:+|nuORF 8.745405648335112 0.6093864874670651 3 [RN]CP{I|L}VE 7 -1 31.726 0.0 0.0 2.8879 0.0 0.0 0.0 284.1733797662719 284.1733797662719 19.736607226101555 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [RN]CP{I|L}VE 2.8879 - 237 + 1 1.597 74303.8 1.0 4634 5287 9911 HBL1_DMSO_200M_050219_1,9923 HBL1_DMSO_200M_050219_1,9923,QATPWLVWV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9924 51.778 195.0 720110.0 25 0 61801.0 + 3636 DAEAKFREI 9 149 360.1893307686439 1077.5461629061317 3 360.1891357302666 MULTI CID FTMS 0 0 0 9911 335258.9375 0.5900525555172513 1 -0.0859451293945312 13 Unmodified _DAEAKFREI_ ENSG00000128590|ENST00000249356|DNAJB9;ENST00000465725.1_1_7:108212170-108215134:+|nuORF;ENST00000491582.1_1_7:108210452-108212392:+|nuORF 16.149105407346934 0.3995459350917656 3 G{M(Oxidation (M))|F}KA[C(Carbamidomethyl (C))H] 6 8 29.654 0.0 0.0 2.7519 0.0 0.0 359.21345717597814 0.0 359.21345717597814 0.0 -0.9678748622465604 -0.9678748622465604 0.0 0 0.0 0.0 0.0 0.4247425010840047 G{M(Oxidation (M))|F}KA[C(Carbamidomethyl (C))H] 2.7519 - 321 1 1.597 114808.9 1.0 4635 5287 9911 HBL1_DMSO_200M_050219_1,9924 HBL1_DMSO_200M_050219_1,9924,DAEAKFREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9925 51.782 212.0 286550.0 25 0 19794.0 -1 TMEAEMSQEL 10 91 600.7423232852251 1199.47009363725 2 600.7424194216728 MULTI CID FTMS 0 0 0 9911 303063.96875 1.0 0 0.0 14 2 Oxidation (M) _TM(Oxidation (M))EAEM(Oxidation (M))SQEL_ ENST00000426083.5_1_2:39745815-39814162:+|nuORF;ENST00000438649.5_1_2:39745815-39811763:+|nuORF 6.723162845929126 0.6955379296933136 3 [{I|L}V]QEC 5 -1 21.198 0.0 0.0 1.7673 0.0 0.0 0.0 624.1738039246126 624.1738039246126 7.2184874961635614 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}V]QEC 1.7673 - 157 1 1.597 49254.5 1.0 4636 5287 9911 HBL1_DMSO_200M_050219_1,9925 HBL1_DMSO_200M_050219_1,9925,TMEAEMSQEL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9926 51.787 263.0 692590.0 25 0 61778.0 + 22367 LPSPSLRP 8 137 433.758365890012 865.502178846824 2 433.7583495974541 MULTI CID FTMS 0 0 0 9911 300814.96875 0.649451529663047 1 -0.0859451293945312 15 Unmodified _LPSPSLRP_ REV__ENSG00000165462|ENST00000298231|PHOX2A 52.268347100219714 0.1285778651304833 3 {I|L}PSPSRP{I|L} 8 -1 + 70.695 0.0 0.0 8.168 8.168 88.236 0.0 0.0 0.0 53.53930110170208 3.725507305015199 3.725507305015199 4.301246920434394 0 1.1237125054200234 1.5228787452803376 1.024227503252014 0.0 {I|L}PSPSRP{I|L};{I|L}PSPSR{I|L}P;{I|L}{I|L}[KQ][HD]{I|L} 8.168;7.6711;0.39113 -;-;- 459 + 1 1.597 142913.0 1.0 4637 5287 9911 HBL1_DMSO_200M_050219_1,9926 HBL1_DMSO_200M_050219_1,9926,LPSPSLRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9927 51.791 217.0 621090.0 25 0 36060.0 + 33556 SILRHVAEV 9 165 512.3009318792416 1022.5873108252832 2 512.3019286990166 MULTI CID FTMS 0 0 0 9911 267330.40625 0.1970477933968119 2 -0.2006683349609375 16 Unmodified _SILRHVAEV_ ENSG00000134001|ENST00000256383|EIF2S1 30.7034409873982 0.1405282614900322 3 {[TV]|[{I|L}S]}{I|L}RHVAEV 9 0 + 60.231 0.0 0.0 5.89 5.89 90.72 0.0 0.0 0.0 20.737862141609185 36.82180829395499 20.737862141609185 24.82702380451002 0 1.028659694992122 2.0 0.1861818737241735 0.0 + + {[TV]|[{I|L}S]}{I|L}RHVAEV;[VG]GKKHVAEV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]H[W{I|L}]V;{[NV]|[RG]}KKHVAEV;{[VA]|[{I|L}G]}{M(Oxidation (M))|F}PPVV[VP]V;{[VA]|[{I|L}G]}P{M(Oxidation (M))|F}PVV[VP]V;{[VA]|[{I|L}G]}PK[NP][W{I|L}]V;{[VA]|[{I|L}G]}KP[NP][W{I|L}]V;[VS]MPPVV[VP]V;{[VA]|[{I|L}G]}PK[WQ][VP]V 5.89;3.4622;2.9001;2.8715;2.8198;1.9417;1.8142;1.5198;1.5053;1.1307 +;-;-;-;-;-;-;-;-;- + 996 1 1.597 107756.2 1.0 4638 5287 9911 HBL1_DMSO_200M_050219_1,9927 HBL1_DMSO_200M_050219_1,9927,SILRHVAEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9928 51.797 318.0 563720.0 25 0 41707.0 + 18290 KVKDILSKV 9 199 343.89368629628484 1028.6592294890545 3 343.8937560915947 MULTI CID FTMS 0 0 0 9911 170349.65625 0.7746586134901602 1 -0.0859451293945312 17 Unmodified _KVKDILSKV_ ENSG00000171262|ENST00000397609|FAM98B;nc|ENSG00000171262|Q52LJ0-1|FAM98B 51.76506608216692 0.0364999419761865 3 {[QV]|[N{I|L}]|[RA]|[KV]}VKE{I|L}SKV 9 3 + 58.278 0.0 0.0 5.6654 5.6654 80.842 0.0 0.0 0.0 7.147642715192504 6.53212513775344 6.53212513775344 3.790098301875084 0 1.055462187404089 0.0 1.1237125054200234 0.1694451763165201 {[QV]|[N{I|L}]|[RA]|[KV]}VKE{I|L}SKV;{[QV]|[N{I|L}]|[RA]|[KV]}KD{I|L}{I|L}SKV;{[QV]|[N{I|L}]|[RA]|[KV]}KVE{I|L}SKV;{[QV]|[N{I|L}]|[RA]|[KV]}VKE{I|L}SVK;{[QV]|[N{I|L}]|[RA]|[KV]}V[SG]{I|L}{I|L}SKV;{[QV]|[N{I|L}]|[RA]|[KV]}KD{I|L}{I|L}SVK;{[QV]|[N{I|L}]|[RA]|[KV]}KVE{I|L}SVK;{[QV]|[N{I|L}]|[RA]|[KV]}V[SG]{I|L}{I|L}SVK;{[QV]|[N{I|L}]|[RA]|[KV]}VKE{I|L}VSK;{[QV]|[N{I|L}]|[RA]|[KV]}KD{I|L}{I|L}VSK 5.6654;5.297;5.0801;5.0304;4.9871;4.6619;4.4451;4.3521;4.1173;3.7488 -;+;-;-;-;-;-;-;-;- + 550 + 1 1.597 143556.6 1.0 4639 5287 9911 HBL1_DMSO_200M_050219_1,9928 HBL1_DMSO_200M_050219_1,9928,KVKDILSKV True True KVKDILSKV 51.796539 343.893756091595 1606335.0 9911.0 nc|ENSG00000171262|Q52LJ0-1|FAM98B;;ENSG00000171262|ENST00000397609|FAM98B 2.7233408292134604 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9929 51.81 800.0 445920.0 25 0 24683.0 1022 AGDAVVAKP 9 252 414.2347253143582 0 414.2354003787041 PEAK CID FTMS 0 0 0 9911 161455.203125 0.69036631034389 1 -0.0859451293945312 18 Unmodified _AGDAVVAKP_ ENSG00000142444|ENST00000270502|TIMM29 25.399314129420983 0.152124705672316 3 AGD{I|L}P 5 5 17.423 0.0 0.0 2.1081 0.0 0.0 128.0569316126435 242.15188013248283 370.2088117451264 0.0 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 AGD{I|L}P 2.1081 - 123 + 1 1.597 272563.2 0.8899999856948853 4640 5287 9911 HBL1_DMSO_200M_050219_1,9929 HBL1_DMSO_200M_050219_1,9929,AGDAVVAKP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9930 51.823 757.0 82673.0 25 0 6365.4 + 15808 ISFYRQDIEEV 11 91 699.8474845369113 1397.6804161406226 2 699.8470947146416 MULTI CID FTMS 0 0 0 9911 131657.859375 0.94815481718311 -1 0.12347412109375 19 Unmodified _ISFYRQDIEEV_ REV__ENSG00000198855|ENST00000552695|FICD;REV__ENST00000361549.2_1_12:108912031-108913249:+|nuORF 9.38312468134398 0.8308777417566128 3 E[K{I|L}]{[QC]|[C(Carbamidomethyl (C))A]}VEV 8 -1 31.445 0.0 0.0 2.2498 0.0 0.0 451.20264159614334 0.0 451.20264159614334 0.0 24.45554701812867 0.0 0.0 0 0.0 0.0 0.8252574989159953 0.3807196863200844 E[K{I|L}]{[QC]|[C(Carbamidomethyl (C))A]}VEV 2.2498 - 209 + 1 1.597 52229.7 1.0 4641 5287 9911 HBL1_DMSO_200M_050219_1,9930 HBL1_DMSO_200M_050219_1,9930,ISFYRQDIEEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9931 51.837 799.0 237330.0 25 0 17671.0 + 3661 DAEMTTRMV 9 197 527.2388258652534 1052.4630987973069 2 527.2404662966728 MULTI CID FTMS 0 0 0 9911 131459.515625 0.3831947331663263 7 -0.7394905090332031 20 Unmodified _DAEMTTRMV_ ENSG00000205220|ENST00000358514|PSMB10 19.361941925380144 0.3125782356748823 3 {[DA]|[EG]}EMTTRMV 9 0 + 41.195 0.0 0.0 3.9141 3.9141 72.878 0.0 0.0 0.0 11.420916726225949 4.322680374519301 4.322680374519301 2.36881092008818 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}EMTTRMV;{[DA]|[EG]}EM[{M(Oxidation (M))|F}V]KDV;{[DA]|[EG]}EMT[MD]K{I|L};{[DA]|[EG]}EMTT{[MG]|[TS]}VV;{[DA]|[EG]}EM[{M(Oxidation (M))|F}V][WR];{[DA]|[EG]}E[W{M(Oxidation (M))|F}]RMV;{[DA]|[EG]}EM[{M(Oxidation (M))|F}V][QT]{I|L};{[DA]|[EG]}EMT[YR]AP;{[DA]|[EG]}EM[{M(Oxidation (M))|F}V]{[SA]|[TG]}A{I|L};{[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}D]|MM}KDV 3.9141;3.689;3.2407;2.9397;2.8827;2.7532;2.6953;2.6402;2.1985;1.8371 +;-;-;-;-;-;-;-;-;- + 1508 + 1 1.597 150047.2 1.0 4642 5287 9911 HBL1_DMSO_200M_050219_1,9931 HBL1_DMSO_200M_050219_1,9931,DAEMTTRMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9933 51.842 33.0 1518100.0 25 0 154650.0 + 4974 DGRLVINRV 9 75 347.8771041953408 1040.6094831862224 3 347.8768493533134 MULTI CID FTMS 0 0 0 9932 1431511.125 0.4592364271266587 1 -0.1147232055664062 1 Unmodified _DGRLVINRV_ ENSG00000032389|ENST00000382125|EIPR1;ENST00000496433.5_1_2:3193107-3197993:-|nuORF 35.61225514009592 0.0995432151795903 3 {[NV]|[RG]}D{I|L}V 5 5 31.184 0.0 0.0 2.9967 0.0 0.0 0.0 497.2836579351384 497.2836579351384 11.733485135259729 0.0 0.0 0.0 0 1.0 0.0 0.6307196863200843 0.3494850021680094 {[NV]|[RG]}D{I|L}V 2.9967 - 81 1 1.594 47909.8 1.0 4643 5288 9932 HBL1_DMSO_200M_050219_1,9933 HBL1_DMSO_200M_050219_1,9933,DGRLVINRV True True DGRLVINRV 51.841861 347.876849353313 44225402.0 9932.0 ENST00000496433.5_1_2:3193107-3197993:-|nuORF;;ENSG00000032389|ENST00000382125|EIPR1 5.096131642659505 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9934 51.843 28.0 2210400.0 25 0 190030.0 + 21476 LPHPGLKV 8 77 430.7712989811264 859.5280450290528 2 430.7712890505791 MULTI CID FTMS 0 0 0 9932 1971472.125 0.874514150395716 -1 0.0859451293945312 2 Unmodified _LPHPGLKV_ ENSG00000119787|ENST00000378954|ATL2;ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2;nc|ENSG00000198513|Q8WXF7-2|ATL1 56.541270873467816 0.1144128637334507 3 {I|L}PHPG{I|L}KV 8 0 + 62.445 0.0 0.0 7.2651 7.2651 89.53 0.0 0.0 0.0 48.57000627676548 9.4812969097282 9.4812969097282 7.513487579716767 0 1.385151878060192 1.5228787452803376 0.0 0.0 + + {I|L}PHPG{I|L}KV;{I|L}PHV[PA]KV 7.2651;6.3909 +;- + 137 + 1 1.594 56241.2 1.0 4644 5288 9932 HBL1_DMSO_200M_050219_1,9934 HBL1_DMSO_200M_050219_1,9934,LPHPGLKV True True LPHPGLKV 51.84304 430.771289050579 90463224.0 9932.0 nc|ENSG00000119787|Q8NHH9-2|ATL2;;ENSG00000119787|ENST00000378954|ATL2;;ENSG00000198513|ENST00000358385|ATL1;;nc|ENSG00000119787|Q8NHH9-5|ATL2;;nc|ENSG00000198513|Q8WXF7-2|ATL1;;nc|ENSG00000119787|Q8NHH9-3|ATL2;;nc|ENSG00000119787|Q8NHH9-4|ATL2 5.851912657419841 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9935 51.845 79.0 884800.0 25 0 88112.0 + -1 VMMWAPGVS 9 83 505.2293464928418 1008.4441400524836 2 505.2295104861259 MULTI CID FTMS 0 0 0 9932 840203.0625 1.0 0 0.0 3 2 Oxidation (M) _VM(Oxidation (M))M(Oxidation (M))WAPGVS_ REV__nc|ENSG00000167037|Q2NKQ1|SGSM1 7.910154910731844 0.6385446671287552 3 VS 2 -1 29.168 0.0 0.0 2.8924 0.0 0.0 0.0 819.3191425709033 819.3191425709033 23.683947707303616 0.0 0.0 0.0 0 0.0 0.6777807052660807 0.3807196863200844 0.0 VS 2.8924 + + 32 + 1 1.594 56320.8 1.0 4645 5288 9932 HBL1_DMSO_200M_050219_1,9935 HBL1_DMSO_200M_050219_1,9935,VMMWAPGVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9936 51.847 107.0 932330.0 25 0 130170.0 + 25357 NARATLSSI 9 113 466.7625827381277 931.5106125430556 2 466.7623474001884 MULTI CID FTMS 0 0 0 9932 677687.5625 0.7104907890116446 -1 0.0859451293945312 4 Unmodified _NARATLSSI_ ENSG00000108107|ENST00000344063|RPL28;ENST00000464124.2_1_5:124144562-124144799:-|nuORF;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28 69.10491478415734 0.0214449631113747 3 {[QG]|[NA]}R[TA]{I|L}SS{I|L} 9 0 + 66.469 0.0 0.0 7.1356 7.1356 87.074 0.0 0.0 0.0 5.253320283335107 12.848561278798968 5.253320283335107 5.253320283335107 0 1.3494850021680094 0.8860566476931632 1.174742501084005 0.5796896906561032 + + {[QG]|[NA]}R[TA]{I|L}SS{I|L};[{I|L}P]M[TA]{I|L}SS{I|L};[AG]GR[TA]{I|L}SS{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}{I|L}DS{I|L};[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}DS{I|L};[{I|L}P][YK]PDS{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}{I|L}SD{I|L};[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PMS{I|L};[{M(Oxidation (M))|F}V]S{I|L}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}PA{M(Oxidation (M))|F}{I|L} 7.1356;6.5717;5.4662;5.4316;4.2357;3.9976;3.9266;3.5907;3.4664;3.4144 +;-;-;-;-;-;-;-;-;- + 594 1 1.594 83619.7 1.0 4646 5288 9932 HBL1_DMSO_200M_050219_1,9936 HBL1_DMSO_200M_050219_1,9936,NARATLSSI True True NARATLSSI 51.847109 466.7627 6815335.5 9932.0 ENSG00000108107|ENST00000344063|RPL28;;nc|ENSG00000108107|P46779-2|RPL28;;ENST00000464124.2_1_5:124144562-124144799:-|nuORF;;nc|ENSG00000108107|P46779-3|RPL28 2.0385677814483643 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9937 51.851 221.0 547800.0 25 0 32881.0 41662 VPQGGWAWAM 10 138 368.1752599315422 1101.5039503948267 3 368.1748535037041 MULTI CID FTMS 0 0 0 9932 390740.25 1.0 0 0.0 5 Unmodified _VPQGGWAWAM_ ENST00000359692.10_3_19:10942263-10942479:+|nuORF 7.289230182591677 0.6929195370588109 3 VK 2 9 23.06 0.0 0.0 2.0935 0.0 0.0 0.0 871.3162603884166 871.3162603884166 1.8618187372417336 0.0 0.0 0.0 0 0.1861818737241735 0.0 0.0 0.5 VK 2.0935 - 93 + 1 1.594 104293.4 1.0 4647 5288 9932 HBL1_DMSO_200M_050219_1,9937 HBL1_DMSO_200M_050219_1,9937,VPQGGWAWAM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9938 51.861 579.0 526160.0 25 0 99905.0 + 15904 ISTEVNPKL 9 175 500.78891988206726 999.5632868309344 2 500.7872192263603 MULTI CID FTMS 0 0 0 9932 362096.96875 0.4275155600702909 -1 0.0859451293945312 6 Unmodified _ISTEVNPKL_ ENSG00000007545|ENST00000397412|CRAMP1 75.76082778847304 0.0188720312721366 3 {I|L}STEVNPK{I|L} 9 0 + 100.47 0.0 0.0 10.052 10.052 93.273 0.0 0.0 0.0 85.51329098301139 13.46787486224656 13.46787486224656 7.7815125038364386 0 0.6861818737241735 2.0 1.1549471895720984 0.25 + + {I|L}STEVNPK{I|L};{I|L}ST{I|L}DNPK{I|L};{I|L}STEVGGPK{I|L};{I|L}ST{I|L}DGGPK{I|L};{I|L}ST[TP][SG]PK{I|L};{I|L}STEVN{I|L}KP;{I|L}ST[TP]V[RN]{I|L};{I|L}ST{I|L}DN{I|L}KP;{I|L}STEVGG{I|L}KP;{I|L}ST{I|L}YYK{I|L} 10.052;9.2733;9.1306;8.3521;7.9878;7.7769;7.5105;6.9984;6.8556;6.6766 +;-;-;-;-;-;-;-;-;- + 3071 + 1 1.594 231509.7 1.0 4648 5288 9932 HBL1_DMSO_200M_050219_1,9938 HBL1_DMSO_200M_050219_1,9938,ISTEVNPKL True True ISTEVNPKL 51.861424 500.78721922636 5715471.5 9932.0 ENSG00000007545|ENST00000397412|CRAMP1 4.902796983718872 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9939 51.865 201.0 497680.0 25 0 25005.0 -1 RYQMPVPS 8 116 497.24683128484094 0 497.2470886111259 PEAK CID FTMS 0 0 0 9932 338535.9375 1.0 0 0.0 7 Oxidation (M) _RYQM(Oxidation (M))PVPS_ ENSG00000115602|ENST00000233954|IL1RL1 21.74664581756881 0.3849600028047819 3 VPVE 4 -1 21.107 0.0 0.0 2.1267 0.0 0.0 495.2045867866756 70.03065668277577 565.2352434694515 0.0 0.0 0.0 0.0 0 1.079689690656103 0.0 0.3054621874040891 0.0 VPVE 2.1267 - 479 + 1 1.594 80549.7 1.0 4649 5288 9932 HBL1_DMSO_200M_050219_1,9939 HBL1_DMSO_200M_050219_1,9939,RYQMPVPS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9940 51.871 326.0 802880.0 25 0 110880.0 + 39907 VFPTRTARF 9 148 365.5419939335199 1093.6041524007596 3 365.5417358279228 MULTI CID FTMS 0 0 0 9932 316600.8125 0.3486628213547446 -5 0.4093475341796875 8 Unmodified _VFPTRTARF_ ENSG00000213339|ENST00000250237|QTRT1 43.85829265575387 0.0542763391141878 3 V{M(Oxidation (M))|F}{M(Oxidation (M))|F}[KP]QEV 8 7 60.924 0.0 0.0 5.5709 0.0 0.0 0.0 116.05104242496328 116.05104242496328 47.11168975697123 0.0 0.0 0.0 0 0.4517188504113846 1.3979400086720375 0.0 1.274227503252014 V{M(Oxidation (M))|F}{M(Oxidation (M))|F}[KP]QEV 5.5709 - 483 + 1 1.594 220869.9 1.0 4650 5288 9932 HBL1_DMSO_200M_050219_1,9940 HBL1_DMSO_200M_050219_1,9940,VFPTRTARF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9941 51.883 672.0 441410.0 25 0 23981.0 + + -1 TYSPALNKM 9 261 512.7117911027882 1023.4090292723764 2 512.7122070193291 MULTI CID FTMS 0 0 0 9932 278836.75 0.6439739828845706 -1 0.0859451293945312 9 Oxidation (M) _EVASM(Oxidation (M))DDEL_ nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-6|TP53;nc|ENSG00000141510|P04637-5|TP53 7.910154910731844 0.6385446671287552 3 [YT][KT]MDCY 8 -1 + 15.084 0.0 0.0 1.4739 1.4739 75.539 0.0 0.0 0.0 1.953719247671488 1.9850940760593865 1.953719247671488 7.917344647723319 0 0.0858955865873612 2.0 0.0 0.0 [YT][KT]MDCY;{[TV]|[{I|L}S]}T[WH]DCY;{NN|[MP]|[D{I|L}]|[EV]}AV[EP]DCY;{NN|[MP]|[D{I|L}]|[EV]}ANYYCY;{NN|[MP]|[D{I|L}]|[EV]}NAYYCY;{NN|[MP]|[D{I|L}]|[EV]}A{[HG]|PP}MDCY 1.4739;0.70028;0.45216;0.33008;0.23539;0.092601 -;-;-;-;-;- 2075 1 1.594 224613.4 1.0 4651 5288 9932 HBL1_DMSO_200M_050219_1,9941 HBL1_DMSO_200M_050219_1,9941,EVASMDDEL False False TYSPALNKM 51.882872 512.712207019329 96901.1640625 9932.0 nc|ENSG00000141510|P04637-3|TP53;;nc|ENSG00000141510|P04637-4|TP53;;ENSG00000141510|ENST00000269305|TP53;;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;;nc|ENSG00000141510|P04637-2|TP53;;nc|ENSG00000141510|P04637-6|TP53;;nc|ENSG00000141510|P04637-5|TP53 1.203053891658783 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9942 51.887 248.0 894580.0 25 0 97151.0 + 4595 DAYTHPQF 8 178 489.7196668198748 977.4247807065497 2 489.7195922732353 MULTI CID FTMS 0 0 0 9932 256322.859375 0.2049927923028592 -2 0.2094192504882812 10 Unmodified _DAYTHPQF_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 61.357469665136826 0.1155423183535659 3 {[DA]|[EG]}YTHPQ{M(Oxidation (M))|F} 8 0 + 74.747 0.0 0.0 7.6474 7.6474 94.459 0.0 0.0 0.0 43.37494778641178 12.5190243216651 12.5190243216651 13.873409493950676 0 0.9604093769761876 2.0 0.0 0.9559771852360796 + + {[DA]|[EG]}YTHPQ{M(Oxidation (M))|F};{[DA]|[EG]}YTHPAG{M(Oxidation (M))|F};{[DA]|[EG]}YTH{M(Oxidation (M))|F}QP;{[DA]|[EG]}YTHWSV;{[DA]|[EG]}YTH[VG]C{I|L};WM[RN]PQ{M(Oxidation (M))|F};{[DA]|[EG]}YTH{M(Oxidation (M))|F}GAP;W[DN][TA]PQ{M(Oxidation (M))|F};{[DA]|[EG]}YT{[VA]|[{I|L}G]}M[HA];WM[RN]PAG{M(Oxidation (M))|F} 7.6474;6.228;5.4808;5.0241;4.3725;4.0183;3.8271;3.3591;3.1665;2.8477 +;-;-;-;-;-;-;-;-;- + 1652 + 1 1.594 171429.8 1.0 4652 5288 9932 HBL1_DMSO_200M_050219_1,9942 HBL1_DMSO_200M_050219_1,9942,DAYTHPQF True True DAYTHPQF 51.88748 489.719592273235 18524340.0 9932.0 ENST00000444025.1_1_7:23602199-23602811:-|nuORF;;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;;ENST00000515678.5_1_4:146042303-146044753:+|nuORF;;ENSG00000164163|ENST00000296577|ABCE1 8.284389813741049 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9943 51.9 693.0 595280.0 25 0 70208.0 + 13435 HLPPTFHAV 9 197 509.7783629833229 1017.5421730334458 2 509.7771484255791 MULTI CID FTMS 0 0 0 9932 256786.578125 0.2095776209717527 -10 0.7952499389648438 11 Unmodified _HLPPTFHAV_ ENSG00000105808|ENST00000262940|RASA4;ENSG00000170667|ENST00000465829|RASA4B;ENST00000427076.5_1_7:44005990-44026228:-|nuORF;ENST00000454572.1_1_7:44005962-44058742:-|nuORF;ENST00000521892.1_7:102249786-102257136:-|nuORF;ENST00000522443.1_7:102249007-102257136:-|nuORF;ENST00000523568.1_7:102240831-102257136:-|nuORF;nc|ENSG00000105808|O43374-2|RASA4 74.42276476219924 0.019389277360085 3 H{I|L}PPT{M(Oxidation (M))|F}HAV 9 0 + 74.529 0.0 0.0 7.3244 7.3244 83.389 0.0 0.0 0.0 2.2454626555970947 5.253669192523702 2.2454626555970947 2.2454626555970947 0 2.274227503252014 1.6989700043360187 0.3807196863200844 0.0 + + H{I|L}PPT{M(Oxidation (M))|F}HAV;{I|L}HPPT{M(Oxidation (M))|F}HAV;[H{I|L}][MT]P{I|L}HAV;H{I|L}PPT{M(Oxidation (M))|F}HG{I|L};{I|L}HPPT{M(Oxidation (M))|F}HG{I|L};H{I|L}PPT{M(Oxidation (M))|F}HVA;{I|L}HPPT{M(Oxidation (M))|F}HVA;[TP]P{M(Oxidation (M))|F}H{I|L}HAV;[Q{I|L}][NS]H{I|L}HAV;[TP]{M(Oxidation (M))|F}PH{I|L}HAV 7.3244;7.1037;6.8081;6.7842;6.5635;6.3524;6.1317;6.107;5.7818;5.7395 +;-;-;-;-;-;-;-;-;- + 5342 + 1 1.594 313176.4 1.0 4653 5288 9932 HBL1_DMSO_200M_050219_1,9943 HBL1_DMSO_200M_050219_1,9943,HLPPTFHAV True True HLPPTFHAV 51.899511 509.777148425579 11228875.0 9932.0 nc|ENSG00000105808|O43374-2|RASA4;;ENST00000523568.1_7:102240831-102257136:-|nuORF;;ENST00000427076.5_1_7:44005990-44026228:-|nuORF;;ENSG00000105808|ENST00000262940|RASA4;;ENST00000522443.1_7:102249007-102257136:-|nuORF;;ENSG00000170667|ENST00000465829|RASA4B;;ENST00000454572.1_1_7:44005962-44058742:-|nuORF;;ENST00000521892.1_7:102249786-102257136:-|nuORF 8.944084803263346 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9944 51.913 774.0 582600.0 25 0 38129.0 18953 LDEFSSLEPS 10 226 562.2631702468399 1122.5117875604797 2 562.2657348513603 MULTI CID FTMS 0 0 0 9932 191655.59375 0.3468005854181305 -1 0.0859451293945312 12 Unmodified _LDEFSSLEPS_ ENSG00000182348|ENST00000333190|ZNF804B 25.399314129420983 0.3980215340001851 3 {[QN]|[E{I|L}]|[KN]}[KC]{M(Oxidation (M))|F}{I|L}YK 8 7 42.309 0.0 0.0 3.7692 0.0 0.0 0.0 94.95332817961769 94.95332817961769 0.297315777959426 0.0 0.0 0.0 0 0.0 0.958607314841775 1.152089824126903 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}[KC]{M(Oxidation (M))|F}{I|L}YK 3.7692 - 14529 1 1.594 330343.4 1.0 4654 5288 9932 HBL1_DMSO_200M_050219_1,9944 HBL1_DMSO_200M_050219_1,9944,LDEFSSLEPS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9945 51.928 800.0 73317.0 25 0 9318.2 -1 LDCRNVDRNVL 11 108 687.349059133806 1372.683565334412 2 687.3477050662041 MULTI CID FTMS 0 0 0 9932 162534.90625 0.3224751372364037 2 -0.2713279724121094 13 Carbamidomethyl (C) _LDC(Carbamidomethyl (C))RNVDRNVL_ ENST00000289968.10_1_16:24930781-24931099:-|nuORF;ENST00000537417.1_16:24930737-24931099:-|nuORF 11.494710602746466 0.7960433852372589 3 PA{I|L}{[SA]|[TG]}N{I|L}V 8 -1 28.536 0.0 0.0 2.0788 0.0 0.0 589.2476063459 0.0 589.2476063459 0.0 15.552528454327684 0.0 0.0 0 0.7416440611282626 0.0 0.5 0.0 PA{I|L}{[SA]|[TG]}N{I|L}V 2.0788 - 459 1 1.594 47782.2 0.8600000143051147 4655 5288 9932 HBL1_DMSO_200M_050219_1,9945 HBL1_DMSO_200M_050219_1,9945,LDCRNVDRNVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9946 51.932 182.0 260870.0 25 0 34492.0 + 45915 YYVDQVTR 8 87 522.2610355129358 1042.5075180926715 2 522.7620117068291 MULTI CID FTMS 0 0 0 9932 152157.96875 0.479111222805161 2 -0.2713279724121094 14 Unmodified _YYVDQVTR_ REV__ENSG00000145526|ENST00000382275|CDH18 10.823927491677226 0.7510103885582552 3 YY{[HG]|PP}{[QN]|[E{I|L}]|[KN]}VY 8 -1 + 47.867 0.0 0.0 4.5915 4.5915 81.868 0.0 0.0 0.0 32.29364375124895 1.4266750356873104 1.4266750356873104 8.750612633917001 0 0.3252574989159953 2.0 0.0 0.0 YY{[HG]|PP}{[QN]|[E{I|L}]|[KN]}VY;YY{[HG]|PP}{[QN]|[E{I|L}]|[KN]}YV;[MN]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QN]|[E{I|L}]|[KN]}VY 4.5915;3.7521;0.56246 -;-;- 69 + 1 1.594 44128.6 1.0 4656 5288 9932 HBL1_DMSO_200M_050219_1,9946 HBL1_DMSO_200M_050219_1,9946,YYVDQVTR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9947 51.946 800.0 203680.0 25 0 12310.0 + -1 AQLDAYNARM 10 166 577.2204792679607 0 577.2283813357353 PEAK CID FTMS 0 0 0 -1 0 15 Carbamidomethyl (C),Oxidation (M) _EVNPC(Carbamidomethyl (C))SDWM(Oxidation (M))_ nc|ENSG00000183684|Q86V81|ALYREF;ENSG00000183684|ENST00000505490|ALYREF 4.75600775471527 0.3444685223463735 3 {I|L}DAYN 5 -1 27.228 0.0 0.0 2.3627 0.0 0.0 199.98155378247608 373.1673678033813 573.1489215858574 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 {I|L}DAYN 2.3627 - 278 + 1 1.594 124234.2 0.8100000023841858 4657 5288 9932 HBL1_DMSO_200M_050219_1,9947 HBL1_DMSO_200M_050219_1,9947,EVNPCSDWM False False AQLDAYNARM 51.945559 577.228381335735 804038.0 9932.0 nc|ENSG00000183684|Q86V81|ALYREF;;ENSG00000183684|ENST00000505490|ALYREF 5.91285498936971 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9948 51.951 217.0 412570.0 25 0 43607.0 + 22006 LPPPPPHAL 9 120 469.7765639409535 937.5385749487068 2 469.7762634158134 MULTI CID FTMS 0 0 0 9932 124299.7890625 0.492338513504272 -6 0.480560302734375 16 Unmodified _LPPPPPHAL_ ENSG00000119669|ENST00000238647|IRF2BPL 56.04830969593885 0.0282699710924866 3 {I|L}PPPPPHA{I|L} 9 0 + 67.985 0.0 0.0 7.2514 7.2514 90.032 0.0 0.0 0.0 47.60522582756545 4.862498499181754 4.862498499181754 8.28672530740382 0 0.6747425010840047 2.0 0.0 0.0 + + {I|L}PPPPPHA{I|L};{I|L}PPPP[YR]V;{I|L}PPP[YR]PV;{I|L}PP[YK]HA{I|L};{I|L}P[YK]PHA{I|L};{I|L}P[YK][YR]V;{I|L}[YK]PPHA{I|L};{I|L}[YK]P[YR]V;{I|L}[YK][YR]PV 7.2514;6.3676;5.424;5.3905;4.6149;3.7383;2.0286;1.152;0.2085 +;-;-;-;-;-;-;-;- + 452 + 1 1.594 73997.5 1.0 4658 5288 9932 HBL1_DMSO_200M_050219_1,9948 HBL1_DMSO_200M_050219_1,9948,LPPPPPHAL True True LPPPPPHAL 51.950833 469.776263415813 1089062.25 9932.0 ENSG00000119669|ENST00000238647|IRF2BPL 6.483723322550456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9949 51.952 45.0 458090.0 25 0 27351.0 + 24659 MLSQDAPTV 9 58 481.2361745933125 960.457796253425 2 481.2365295290947 MULTI CID FTMS 0 0 0 9932 136854.390625 0.5050803977265191 -1 0.0859451293945312 17 Unmodified _MLSQDAPTV_ ENSG00000104320|ENST00000265433|NBN 7.910154910731844 0.6385446671287552 3 {I|L} 1 8 12.218 0.0 0.0 1.2722 0.0 0.0 829.3629609036188 0.0 829.3629609036188 0.0 0.2287874528033739 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2722 + + 27 + 1 1.594 21580.2 1.0 4659 5288 9932 HBL1_DMSO_200M_050219_1,9949 HBL1_DMSO_200M_050219_1,9949,MLSQDAPTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9951 51.956 14.0 3825900.0 25 0 628210.0 + 22011 LPPPPPPAM 9 78 458.7515933437354 915.4886337542708 2 458.7517272830009 MULTI CID FTMS 0 0 0 9950 3894753.75 0.5564963049238177 -5 0.49542236328125 1 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 3 [{I|L}P]PPPP 6 3 45.468 0.0 0.0 4.9665 0.0 0.0 0.0 314.11773940427344 314.11773940427344 24.754406279932653 0.0 0.0 0.0 0 1.2614393726401687 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 4.9665 + + 146 1 1.594 47910.2 1.0 4660 5289 9950 HBL1_DMSO_200M_050219_1,9951 HBL1_DMSO_200M_050219_1,9951,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9952 51.958 21.0 2119100.0 25 0 112890.0 + 21130 LPAPPTQNM 9 85 484.7473525872371 0 484.7473022341728 PEAK CID FTMS 0 0 0 9950 2366773.0 0.5213900000055074 3 -0.3458786010742187 2 Unmodified _LPAPPTQNM_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 57.47134341890925 0.0195089841803479 3 DQTPPA 6 7 28.721 0.0 0.0 2.9686 0.0 0.0 148.0656147430305 207.1143587701781 355.17997351320867 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.5 0.0 DQTPPA 2.9686 - 113 + 1 1.594 40494.2 1.0 4661 5289 9950 HBL1_DMSO_200M_050219_1,9952 HBL1_DMSO_200M_050219_1,9952,LPAPPTQNM True True LPAPPTQNM 51.95765 484.747302234173 149954724.0 9950.0 ENSG00000184402|ENST00000331758|SS18L1;;ENSG00000141380|ENST00000415083|SS18;;nc|ENSG00000184402|O75177-5|SS18L1;;nc|ENSG00000184402|O75177-2|SS18L1;;nc|ENSG00000141380|Q15532-2|SS18 6.336935202280681 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9953 51.959 17.0 2377300.0 25 0 365640.0 + 45523 YTTDRVMTV 9 61 543.270605750448 1084.526658567696 2 543.2685424685478 MULTI CID FTMS 0 0 0 9950 2355324.25 0.850509806824537 -1 0.1147232055664062 3 Unmodified _YTTDRVMTV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000523334.1_1_6:114270238-114277280:-|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 43.9818466556824 0.0535980856389242 3 YTTD 4 5 50.974 0.0 0.0 4.7001 0.0 0.0 0.0 601.3151339166624 601.3151339166624 21.642659685904345 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + YTTD 4.7001 + + 39 + 1 1.594 39491.4 1.0 4662 5289 9950 HBL1_DMSO_200M_050219_1,9953 HBL1_DMSO_200M_050219_1,9953,YTTDRVMTV True True YTTDRVMTV 51.958829 543.268542468548 20931810.0 9950.0 ENSG00000196591|ENST00000519065|HDAC2;;ENST00000523334.1_1_6:114270238-114277280:-|nuORF;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENSG00000116478|ENST00000373548|HDAC1 8.042586167653402 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9954 51.96 53.0 1169700.0 25 0 183390.0 + -1 HPCRCPGVLK 10 61 583.7999716561613 1165.5853903791226 2 583.8001586794853 MULTI CID FTMS 0 0 0 9950 866913.5625 0.7482917372845695 -1 0.1147232055664062 4 Carbamidomethyl (C) _HPC(Carbamidomethyl (C))RCPGVLK_ REV__nc|ENSG00000122136|Q9NY56-2|OBP2A 13.042465956692816 0.6287021003332052 3 V[MT]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K 7 -1 31.259 0.0 0.0 2.6818 0.0 0.0 357.16600058702835 0.0 357.16600058702835 0.0 20.149860214307225 0.0 0.0 0 0.5 0.0 0.3807196863200844 1.1237125054200234 V[MT]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K 2.6818 - 67 + 1 1.594 53146.6 1.0 4663 5289 9950 HBL1_DMSO_200M_050219_1,9954 HBL1_DMSO_200M_050219_1,9954,HPCRCPGVLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9955 51.962 55.0 1205100.0 25 0 109400.0 15893 ISSFRFEV 8 86 492.7592489166072 983.5039449000144 2 492.7590209841728 MULTI CID FTMS 0 0 0 9950 579283.0625 0.23200092935249 -1 0.1147232055664062 5 Unmodified _ISSFRFEV_ ENSG00000133107|ENST00000379705|TRPC4;ENST00000426868.6_1_13:38211042-38213329:-|nuORF;nc|ENSG00000133107|Q9UBN4-2|TRPC4;nc|ENSG00000133107|Q9UBN4-4|TRPC4;nc|ENSG00000133107|Q9UBN4-5|TRPC4;nc|ENSG00000133107|Q9UBN4-6|TRPC4 22.736283301280096 0.5659792798204337 3 G{I|L}EV 4 6 32.18 0.0 0.0 3.272 0.0 0.0 567.2772083966812 0.0 567.2772083966812 0.0 16.777746047204232 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 G{I|L}EV 3.272 - 141 1 1.594 57534.9 1.0 4664 5289 9950 HBL1_DMSO_200M_050219_1,9955 HBL1_DMSO_200M_050219_1,9955,ISSFRFEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9956 51.971 558.0 345740.0 25 0 35045.0 + 35603 STYDETLHVA 10 177 568.267365365747 1134.5201777982938 2 568.2672607302666 MULTI CID FTMS 0 0 0 9950 326643.1875 0.7719121448650429 -1 0.1147232055664062 6 Unmodified _STYDETLHVA_ ENSG00000112984|ENST00000394894|KIF20A;nc|ENSG00000112984|O95235-2|KIF20A 54.773552608820026 0.052133998764723 3 {[MG]|[TS]}YDET{I|L}HAV 10 2 + 41.467 0.0 0.0 3.655 3.655 73.692 0.0 0.0 0.0 3.085003915861641 3.085003915861641 3.085003915861641 3.085003915861641 0 0.3807196863200844 0.0 0.7059771852360797 0.0 {[MG]|[TS]}YDET{I|L}HAV;[H{I|L}]TEDYV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[H{I|L}]TEDVY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[HV]{I|L}TEDY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[H{I|L}]TEVDY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YT]DE{I|L}HV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[MG]|[TS]}YDET{I|L}{[VA]|[{I|L}G]}H;{[YD]|[{M(Oxidation (M))|F}M]}TE{I|L}HV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{I|L}T]HEDYV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{I|L}T]HEDVY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 3.655;3.3831;3.3618;3.0265;3.011;2.9889;2.9475;2.8073;2.7955;2.7742 -;-;-;-;-;-;-;-;-;- 2161 + 1 1.594 144492.3 1.0 4665 5289 9950 HBL1_DMSO_200M_050219_1,9956 HBL1_DMSO_200M_050219_1,9956,STYDETLHVA True True STYDETLHVA 51.971417 568.267260730267 3071373.75 9950.0 nc|ENSG00000112984|O95235-2|KIF20A;;ENSG00000112984|ENST00000394894|KIF20A 6.530524730682373 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9957 51.976 234.0 621560.0 25 0 62458.0 + 30607 RFFDGAKDV 9 141 527.769859577099 1053.525166220998 2 527.7689697146416 MULTI CID FTMS 0 0 0 9950 272398.625 1.0 0 0.0 7 Unmodified _RFFDGAKDV_ ENSG00000171940|ENST00000371471|ZNF217 40.23920728925047 0.0741434193262949 3 {[DA]|[EG]}[KG]{[HG]|PP}GAKDV 11 6 + 68.782 0.0 0.0 6.5287 6.5287 85.91 0.0 0.0 0.0 11.387145270309226 16.57577319177794 11.387145270309226 5.961991522242563 0 1.1643943297944483 1.6989700043360187 0.9291746928241128 0.2396518287104437 {[DA]|[EG]}[KG]{[HG]|PP}GAKDV;{[DA]|[EG]}[KG]{[HG]|PP}QKDV;{[DA]|[EG]}[KG][HN]AKDV;{[SA]|[TG]}{[NV]|[RG]}{[HG]|PP}GAKDV;{[QD]|[EN]|[WG]|[KD]|[RS]}Q{[HG]|PP}GAKDV;[VS]GQ{[HG]|PP}GAKDV;{[DA]|[EG]}[KG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}RDV;{[WN]|[YH]}[HK]GAKDV;{[SA]|[TG]}{[NV]|[RG]}{[HG]|PP}QKDV;{[QD]|[EN]|[WG]|[KD]|[RS]}Q{[HG]|PP}QKDV 6.5287;5.9628;5.9046;5.4479;5.41;5.2968;5.2881;4.9311;4.882;4.8482 -;-;-;-;-;-;-;-;-;- 1680 1 1.594 114911.8 1.0 4666 5289 9950 HBL1_DMSO_200M_050219_1,9957 HBL1_DMSO_200M_050219_1,9957,RFFDGAKDV True True RFFDGAKDV 51.975808 527.768969714642 2680734.5 9950.0 ENSG00000171940|ENST00000371471|ZNF217 3.5908879041671757 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9958 51.982 327.0 569880.0 25 0 57391.0 + 32348 RYPDSILEH 9 161 377.1928057540807 1128.5565878624425 3 377.1924621462822 MULTI CID FTMS 0 0 0 9950 273136.0625 0.5817100464577156 1 -0.1566047668457031 8 Unmodified _RYPDSILEH_ ENSG00000104738|ENST00000649973|MCM4 49.93300154707207 0.0405168250806675 3 S{I|L}{I|L}EH 5 4 39.922 0.0 0.0 3.5374 0.0 0.0 531.2438570048236 0.0 531.2438570048236 0.0 18.17024086827658 0.0 0.0 0 1.0 0.0 0.5 0.0 + S{I|L}{I|L}EH 3.5374 + + 245 + 1 1.594 154726.1 1.0 4667 5289 9950 HBL1_DMSO_200M_050219_1,9958 HBL1_DMSO_200M_050219_1,9958,RYPDSILEH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9959 51.993 674.0 154160.0 25 0 7914.0 + 44573 YPFHKQPPTYV 11 156 688.8525987754924 1375.6906446177848 2 689.3557617068291 MULTI CID FTMS 0 0 0 9950 241362.96875 1.0 0 0.0 9 Unmodified _YPFHKQPPTYV_ ENSG00000100258|ENST00000474879|LMF2;ENST00000504717.1_1_22:50941822-50943237:-|nuORF;nc|ENSG00000100258|Q9BU23-2|LMF2;nc|ENSG00000100258|Q9BU23-3|LMF2 71.70789743142352 0.0274550572689813 3 YP{M(Oxidation (M))|F}[PA]QPP[TP]YV 12 3 + 67.169 0.0 0.0 4.8825 4.8825 73.113 0.0 0.0 0.0 32.41826726302809 11.71272058115111 11.71272058115111 0.7005238015034649 0 1.110924374808178 1.5228787452803376 0.7059771852360797 0.5 YP{M(Oxidation (M))|F}[PA]QPP[TP]YV;YP{M(Oxidation (M))|F}HKQP[TP]YV;YP{M(Oxidation (M))|F}APQK[YT]YV;YPDTVQPP[{I|L}T]{M(Oxidation (M))|F}V;YP{M(Oxidation (M))|F}[PA]QPP[{I|L}T]{M(Oxidation (M))|F}V;YP{M(Oxidation (M))|F}HKQP[{I|L}T]{M(Oxidation (M))|F}V;YP{M(Oxidation (M))|F}[PA]QPP{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}HKQVTDNQ;YP{M(Oxidation (M))|F}HKQP{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]};YP{M(Oxidation (M))|F}[VS]YP{[QN]|[E{I|L}]|[KN]}YV 4.8825;4.8316;4.6902;3.8492;3.8213;3.7704;3.3611;3.3485;3.3102;3.0723 -;+;-;-;-;-;-;-;-;- + 4429 + 1 1.594 74344.6 1.0 4668 5289 9950 HBL1_DMSO_200M_050219_1,9959 HBL1_DMSO_200M_050219_1,9959,YPFHKQPPTYV True True YPFHKQPPTYV 51.993473 688.8548 9797302.0 9950.0 nc|ENSG00000100258|Q9BU23-3|LMF2;;ENST00000504717.1_1_22:50941822-50943237:-|nuORF;;nc|ENSG00000100258|Q9BU23-2|LMF2;;ENSG00000100258|ENST00000474879|LMF2 9.714351336161297 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9960 52.006 695.0 254920.0 25 0 27563.0 + 5956 DQLCISFHHFP 11 128 672.3144265477721 1342.614300162344 2 672.3152953982353 MULTI CID FTMS 0 0 0 9950 226757.5625 0.3186226441109029 -5 0.49542236328125 10 Unmodified _DQLCISFHHFP_ REV__ENST00000556103.1_1_14:23946657-23947232:+|nuORF 15.248480904072842 0.7179608125786238 3 [PS]TAS{M(Oxidation (M))|F}{[QS]|[NT]}{I|L} 9 -1 39.632 0.0 0.0 2.9518 0.0 0.0 0.0 421.1469568071198 421.1469568071198 -0.3920470519873404 0.0 -0.3920470519873404 0.0 0 0.0 0.0 2.6549471895720984 0.3494850021680094 [PS]TAS{M(Oxidation (M))|F}{[QS]|[NT]}{I|L} 2.9518 - 2073 1 1.594 135355.2 1.0 4669 5289 9950 HBL1_DMSO_200M_050219_1,9960 HBL1_DMSO_200M_050219_1,9960,DQLCISFHHFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9961 52.019 800.0 506710.0 25 0 46538.0 13468 HLSSCSLC 8 230 425.1850973278951 848.3556417225902 2 425.1858398318291 MULTI CID FTMS 0 0 0 9950 188206.75 0.2962830755740721 2 -0.2265472412109375 11 Unmodified _HLSSCSLC_ ENST00000261813.8_1_5:139624899-139625277:-|nuORF 9.347437153973935 0.7675937258251505 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M 3 8 18.517 0.0 0.0 2.1827 0.0 0.0 0.0 439.17251118964026 439.17251118964026 5.716110416659397 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.4247425010840047 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M 2.1827 - 443 1 1.594 311124.3 0.9300000071525574 4670 5289 9950 HBL1_DMSO_200M_050219_1,9961 HBL1_DMSO_200M_050219_1,9961,HLSSCSLC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9962 52.032 750.0 507220.0 25 0 26054.0 + 32651 SCKKTMESEL 10 197 578.2738840504194 1154.533215167639 2 578.2739135622978 MULTI CID FTMS 0 0 0 9950 167767.34375 0.104327329302144 -1 0.1147232055664062 12 Unmodified _SCKKTMESEL_ REV__ENSG00000122483|ENST00000690025|CCDC18;REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18;REV__nc|ENSG00000122483|Q5T9S5|CCDC18 45.69961567697781 0.105390671673896 3 [DN]ESVG[RH]E{I|L} 10 -1 + 68.981 0.0 0.0 5.9748 5.9748 89.348 0.0 0.0 0.0 48.01181751853561 15.026975159433531 15.026975159433531 12.469165662315689 0 0.7887254899964358 0.0 2.2104093769761874 0.2614393726401688 [DN]ESVG[RH]E{I|L};[DN]EDK[RH]E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MGVG[RH]E{I|L};[DN]{[TV]|[{I|L}S]}DG[RH]E{I|L};{[CP]|[EA]}[QT]DG[RH]E{I|L};[DN]WW[RH]E{I|L};[DN]{M(Oxidation (M))|F}[KQ][YV]E{I|L};[C(Carbamidomethyl (C))S]K{[DS]|[MA]|[CV]|TT}MVSE{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}{[ET]|[MV]}MVSE{I|L};[VP][RN]SG[PA]E[DN] 5.9748;4.8948;4.501;3.4956;2.9365;2.5395;2.263;2.23;2.1923;2.1274 -;-;-;-;-;-;-;-;-;- 1820 + 1 1.594 277662.2 1.0 4671 5289 9950 HBL1_DMSO_200M_050219_1,9962 HBL1_DMSO_200M_050219_1,9962,SCKKTMESEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9963 52.048 800.0 126090.0 25 0 9722.4 + 5622 DPCIYKFYEFY 11 105 744.3308271408575 1486.647101348515 2 744.3320190310478 MULTI CID FTMS 0 0 0 9950 157304.078125 0.2679146512558706 2 -0.2265472412109375 13 Unmodified _DPCIYKFYEFY_ REV__ENSG00000163840|ENST00000296161|DTX3L 5.731851221503515 0.8481046878870278 3 {[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y 12 -1 + 54.759 0.0 0.0 3.6834 3.6834 73.356 0.0 0.0 0.0 3.2121122500096533 39.27494066097715 3.2121122500096533 3.0102999566398125 0 0.8182503180159344 0.0 0.0 0.8494850021680094 {[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{I|L}[C(Carbamidomethyl (C))M]AQQNA{M(Oxidation (M))|F}Y;[QP][YE]EAQQNA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQEAQQNA{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}[WM]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F}Y 3.6834;3.4809;3.2018;3.1854;3.115;3.076;3.076;3.0714;3.0714;3.0714 -;-;-;-;-;-;-;-;-;- 1232 1 1.594 74349.5 0.8399999737739563 4672 5289 9950 HBL1_DMSO_200M_050219_1,9963 HBL1_DMSO_200M_050219_1,9963,DPCIYKFYEFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9964 52.062 800.0 150370.0 25 0 11475.0 + -1 DILSGMPECTI 11 137 618.2834350466728 0 618.2834350466728 PEAK CID FTMS 0 0 0 -1 0 14 Carbamidomethyl (C) _DILSGMPEC(Carbamidomethyl (C))TI_ REV__ENSG00000144893|ENST00000687756|MED12L;REV__nc|ENSG00000144893|Q86YW9-4|MED12L;REV__nc|ENSG00000144893|Q86YW9|MED12L 27.628801355627647 0.2572500445580473 3 EM 2 -1 15.217 0.0 0.0 1.2326 0.0 0.0 232.14336443073347 739.3013521369254 971.4447165676588 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 EM 1.2326 - 719 + 1 1.594 93016.8 0.8399999737739563 4673 5289 9950 HBL1_DMSO_200M_050219_1,9964 HBL1_DMSO_200M_050219_1,9964,DILSGMPECTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9965 52.077 800.0 281070.0 25 0 23791.0 + -1 DAELRTKMV 9 176 539.7798716685817 1077.5451904039633 2 539.7805053591728 MULTI CID FTMS 0 0 0 9950 119663.5625 0.0385440511551879 3 -0.3458786010742187 15 Oxidation (M) _DAELRTKM(Oxidation (M))V_ REV__ENSG00000136811|ENST00000351030|ODF2;REV__nc|ENSG00000136811|Q5BJF6-10|ODF2;REV__nc|ENSG00000136811|Q5BJF6-2|ODF2;REV__nc|ENSG00000136811|Q5BJF6-3|ODF2;REV__nc|ENSG00000136811|Q5BJF6-4|ODF2;REV__nc|ENSG00000136811|Q5BJF6-5|ODF2;REV__nc|ENSG00000136811|Q5BJF6-6|ODF2;REV__nc|ENSG00000136811|Q5BJF6-7|ODF2;REV__nc|ENSG00000136811|Q5BJF6-8|ODF2;REV__nc|ENSG00000136811|Q5BJF6-9|ODF2;REV__nc|ENSG00000136811|Q5BJF6|ODF2 29.081581746732265 0.1611639662936252 3 DAEAKH 6 -1 44.334 0.0 0.0 4.1143 0.0 0.0 0.0 423.2256563776001 423.2256563776001 4.974250108400469 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.4247425010840047 0.0 DAEAKH 4.1143 - 864 + 1 1.594 173180.4 0.800000011920929 4674 5289 9950 HBL1_DMSO_200M_050219_1,9965 HBL1_DMSO_200M_050219_1,9965,DAELRTKMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9966 52.083 361.0 434400.0 25 0 30124.0 + 24387 MFPEHAVKAY 10 177 398.1987997273793 1191.574569782338 3 398.1987792849541 MULTI CID FTMS 0 0 0 9950 113310.359375 0.1377484286277186 11 -1.2149734497070312 16 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 26.268140514670165 0.3785003716575977 3 M{M(Oxidation (M))|F}[EP]HAVKAY 10 0 + 40.186 0.0 0.0 3.3725 3.3725 76.482 0.0 0.0 0.0 27.087386611091773 4.947374057560808 4.947374057560808 6.197887582883936 0 0.0 1.3979400086720375 0.0 0.0 + + M{M(Oxidation (M))|F}[EP]HAVKAY;M{M(Oxidation (M))|F}[EP]HA{I|L}[KG]Y;M{M(Oxidation (M))|F}[QA]PQ[Q{I|L}]VM;M{M(Oxidation (M))|F}[EP]HAVKS{M(Oxidation (M))|F};M{M(Oxidation (M))|F}[EP]HAVKYA;M{M(Oxidation (M))|F}[EP]HAVK{M(Oxidation (M))|F}S;M{M(Oxidation (M))|F}[QA]PQ[Q{I|L}]MV;M{M(Oxidation (M))|F}[EP]HAVYKA;M{M(Oxidation (M))|F}[QA]PQ[W{I|L}]TA 3.3725;2.8524;2.8385;2.7373;2.6417;2.5603;2.3907;2.3328;1.2714 +;-;-;-;-;-;-;-;- + 384 + 1 1.594 126388.9 1.0 4675 5289 9950 HBL1_DMSO_200M_050219_1,9966 HBL1_DMSO_200M_050219_1,9966,MFPEHAVKAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9967 52.097 800.0 77952.0 25 0 3089.4 45683 YWCEQCDVQF 10 115 660.7523756018866 1319.490198270573 2 660.7532226443291 MULTI CID FTMS 0 0 0 9950 106601.796875 1.0 0 0.0 17 Unmodified _YWCEQCDVQF_ ENSG00000121864|ENST00000496856|ZNF639 6.2057823575117 0.6979311171683138 3 ENQQV{M(Oxidation (M))|F} 6 7 35.718 0.0 0.0 2.707 0.0 0.0 556.1421986310562 0.0 556.1421986310562 0.0 17.302046884880934 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.8494850021680094 ENQQV{M(Oxidation (M))|F} 2.707 - 324 1 1.594 48832.9 0.6800000071525574 4676 5289 9950 HBL1_DMSO_200M_050219_1,9967 HBL1_DMSO_200M_050219_1,9967,YWCEQCDVQF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9968 52.109 619.0 287700.0 25 0 19860.0 + -1 LEHWCSYM 8 200 381.1527714261067 0 380.7030822634697 PEAK CID FTMS 0 0 0 -1 0 18 Carbamidomethyl (C),Oxidation (M) _LEHWC(Carbamidomethyl (C))SYM(Oxidation (M))_ REV__ENSG00000102010|ENST00000348343|BMX 3.5964929083625545 0.5870767149301087 3 T 1 -1 8.1295 0.0 0.0 1.0693 0.0 0.0 574.1538419471369 82.06695734195546 656.2207992890924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1139829889124311 0.0 T 1.0693 - 35 + 1 1.594 140377.6 1.0 4677 5289 9950 HBL1_DMSO_200M_050219_1,9968 HBL1_DMSO_200M_050219_1,9968,LEHWCSYM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9970 52.113 11.0 3069100.0 25 0 332690.0 + 16997 KIYEGQVEV 9 69 532.7849061537099 1063.5552593742198 2 532.7850219607353 MULTI CID FTMS 0 0 0 9969 3480274.5 0.0574750648905057 3 -0.2811012268066406 1 Unmodified _KIYEGQVEV_ ENSG00000122406|ENST00000370321|RPL5;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 26.268140514670165 0.1969607489560049 3 QVEV 4 5 40.745 0.0 0.0 3.8311 0.0 0.0 590.3081532209 0.0 590.3081532209 0.0 36.76599703664159 0.0 0.0 0 0.805462187404089 0.0 0.0 0.4247425010840047 + QVEV 3.8311 + + 70 1 1.627 34940.5 1.0 4678 5290 9969 HBL1_DMSO_200M_050219_1,9970 HBL1_DMSO_200M_050219_1,9970,KIYEGQVEV False True KIYEGQVEV 52.113076 532.785021960735 1584053120.0 9969.0 ENSG00000122406|ENST00000370321|RPL5;;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 2.8723047574361167 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9971 52.114 17.0 3009200.0 25 0 273670.0 + 32346 RYPDSILEH 9 72 565.2851549409711 1128.555756948742 2 565.2852050662041 MULTI CID FTMS 0 0 0 9969 2190965.75 0.3852818875203733 3 -0.2811012268066406 2 Unmodified _RYPDSILEH_ ENSG00000104738|ENST00000649973|MCM4 19.361941925380144 0.3125782356748823 3 S{I|L}{I|L}EH 5 4 46.766 0.0 0.0 4.1439 0.0 0.0 531.2450889634312 0.0 531.2450889634312 0.0 32.78659694992122 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + S{I|L}{I|L}EH 4.1439 + + 102 1 1.627 43072.6 1.0 4679 5290 9969 HBL1_DMSO_200M_050219_1,9971 HBL1_DMSO_200M_050219_1,9971,RYPDSILEH False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9972 52.117 154.0 4437000.0 25 0 422400.0 31731 RRRWHWHWPRP 11 194 557.3017016736884 1668.883275621265 3 557.3021728396416 MULTI CID FTMS 0 0 0 9969 2057907.125 1.0 0 0.0 3 Unmodified _RRRWHWHWPRP_ ENST00000321582.9_1_9:124855435-124855555:-|nuORF 1.1097533296519684 0.8699120469545434 3 V{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K 15 14 + 177.46 0.0 0.0 10.633 10.633 66.471 0.0 0.0 0.0 100.83106784629211 17.79931155766755 17.79931155766755 0.0 0 0.7134679910804405 2.0 2.448104871308642 2.45205343810445 V{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;V{I|L}K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;V{I|L}[AG]{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;V{I|L}K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;V{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;V{I|L}[AG]{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;V{I|L}Q{M(Oxidation (M))|F}S{[RE]|[WV]}AH{I|L}DN{I|L}K;V{I|L}Q{M(Oxidation (M))|F}SD[Q{I|L}]H{I|L}DN{I|L}K;V{I|L}K{M(Oxidation (M))|F}SD[Q{I|L}]H{I|L}DN{I|L}K;V{I|L}[AG]{M(Oxidation (M))|F}S{[RE]|[WV]}AH{I|L}DN{I|L}K 10.633;10.633;10.092;10.092;10.092;9.5522;8.7854;8.759;8.759;8.2431 -;-;-;-;-;-;-;-;-;- 750000 + 1 1.627 500014.6 1.0 4680 5290 9969 HBL1_DMSO_200M_050219_1,9972 HBL1_DMSO_200M_050219_1,9972,RRRWHWHWPRP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9973 52.118 26.0 1204700.0 25 0 243690.0 4398 DAVRGQIVV 9 52 478.7797682178253 0 478.7798644900322 PEAK CID FTMS 0 0 0 9969 1399604.5 0.899376403413616 -1 0.1566047668457031 4 Unmodified _DAVRGQIVV_ ENSG00000198742|ENST00000361368|SMURF1;nc|ENSG00000198742|Q9HCE7|SMURF1 18.1463463914782 0.2188250594445807 3 V{I|L} 2 7 19.776 0.0 0.0 2.0696 0.0 0.0 117.07978682451932 623.2918739200667 740.371660744586 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 V{I|L} 2.0696 - 6 + 1 1.627 30029.2 1.0 4681 5290 9969 HBL1_DMSO_200M_050219_1,9973 HBL1_DMSO_200M_050219_1,9973,DAVRGQIVV False True GTGRAPSLVV 52.118499 478.779864490032 11515401.0 9969.0 ENST00000444802.5_1_19:9715590-9728413:-|nuORF 0.4032179762919743 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9974 52.123 237.0 608870.0 25 0 85166.0 9546 FLGTVEFLLLT 11 104 626.8610774003193 1251.7076018674386 2 626.8610717654228 MULTI CID FTMS 0 0 0 9969 1229329.75 1.0 0 0.0 5 Unmodified _FLGTVEFLLLT_ ENSG00000255804|ENST00000540461|OR6J1 34.40172386719151 0.2986346176549658 3 {M(Oxidation (M))|F}{I|L}ASVSTV{I|L}TSK 12 8 + 108.93 0.0 0.0 8.7026 8.7026 97.403 0.0 0.0 0.0 75.5090954132788 12.1669877129645 12.1669877129645 24.852127111743386 0 1.174742501084005 0.0 1.8129529932484496 0.1989700043360188 {M(Oxidation (M))|F}{I|L}ASVSTV{I|L}TSK;{M(Oxidation (M))|F}{I|L}ASV{[WT]|[RM]}{I|L}TSK;{M(Oxidation (M))|F}{I|L}ASVSTS{I|L}{I|L}SK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}T]{I|L}{I|L}VSA{I|L}E;{M(Oxidation (M))|F}{I|L}AW{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV][{I|L}V]VSA{I|L}E;{M(Oxidation (M))|F}{I|L}AW{I|L}{I|L}[{M(Oxidation (M))|F}T]NK;[{M(Oxidation (M))|F}V]YV{I|L}{I|L}VSA{I|L}E;[VS]T{I|L}TKYKA{I|L}E;[{M(Oxidation (M))|F}V]Y{I|L}[{I|L}V]VSA{I|L}E 8.7026;6.7171;6.5611;4.1314;4.0626;4.0315;3.9637;3.9352;3.8868;3.8354 -;-;-;-;-;-;-;-;-;- 1189 + 1 1.627 112197.6 1.0 4682 5290 9969 HBL1_DMSO_200M_050219_1,9974 HBL1_DMSO_200M_050219_1,9974,FLGTVEFLLLT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9975 52.128 248.0 901210.0 25 0 89257.0 -1 0 166 599.9999686346746 1796.9780765042235 3 600.3346435427666 MULTI CID FTMS 0 0 0 9969 1145729.25 1.0 0 0.0 6 3 KV{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K 17 -1 + 194.26 0.0 0.0 10.81 10.81 92.593 0.0 0.0 0.0 10.876144135844896 10.796896906561043 10.796896906561043 6.726410656136721 0 3.8015384402724592 1.0 2.059894379144197 1.644599018282542 KV{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;KV{I|L}K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;KV{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;KV{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;KV{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DNK{I|L};[{I|L}V]KGA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;KV{I|L}K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;KV{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;KV{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DNK{I|L};KV{I|L}K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DNK{I|L} 10.81;10.436;10.436;10.309;10.209;10.111;9.9343;9.9343;9.835;9.835 -;-;-;-;-;-;-;-;-;- 96554 + 1 1.627 168292.8 1.0 4683 5290 9969 HBL1_DMSO_200M_050219_1,9975 HBL1_DMSO_200M_050219_1,9975, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9976 52.129 54.0 992900.0 25 0 184120.0 21477 LPHPGLKV 8 76 430.7712989811264 859.5280450290528 2 430.7713806033134 MULTI CID FTMS 0 0 0 9969 922056.25 0.4090097079540549 1 -0.0699424743652343 7 Unmodified _LPHPGLKV_ ENSG00000119787|ENST00000378954|ATL2;ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2;nc|ENSG00000198513|Q8WXF7-2|ATL1 38.15118350030904 0.2652218139009398 3 {I|L}PHP 4 4 50.851 0.0 0.0 5.9162 0.0 0.0 0.0 412.2551668756469 412.2551668756469 38.8614394761297 0.0 0.0 0.0 0 0.6694451763165201 1.5228787452803376 0.0 0.0 + {I|L}PHP 5.9162 + + 51 + 1 1.627 47056.7 1.0 4684 5290 9969 HBL1_DMSO_200M_050219_1,9976 HBL1_DMSO_200M_050219_1,9976,LPHPGLKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9977 52.13 43.0 1003900.0 25 0 70034.0 + 19908 LHVDPENFR 9 68 376.1935760001036 0 376.1927062869072 PEAK CID FTMS 0 0 0 9969 783373.125 1.0 0 0.0 8 Unmodified _LHVDPENFR_ CON__Q3SX09;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 26.88365393820708 0.1386685954232994 3 2 8 14.776 0.0 0.0 1.9692 0.0 0.0 315.1491206588351 247.12073405765665 562.2698547164917 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 1.9692 - 36 + 1 1.627 43502.5 1.0 4685 5290 9969 HBL1_DMSO_200M_050219_1,9977 HBL1_DMSO_200M_050219_1,9977,LHVDPENFR False True LHVDPENFR 52.130145 376.192706286907 5910020.0 9969.0 Q3SX09;;ENSG00000244734|ENST00000335295|HBB;;ENSG00000223609|ENST00000650601|HBD;;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 6.2317125002543134 3.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 9978 52.137 358.0 84764.0 25 0 6253.0 + 20804 LLVVYPWTQR 10 59 637.8669346801047 1273.7193164270093 2 637.8667480349541 MULTI CID FTMS 0 0 0 9969 702093.375 1.0 0 0.0 9 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 14.40537977576856 0.6058337302021266 3 {I|L}{I|L}VVY 5 5 51.466 0.0 0.0 4.0406 0.0 0.0 0.0 683.3266545792081 683.3266545792081 40.0459292251776 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {I|L}{I|L}VVY 4.0406 + + 38 + 1 1.627 33095.3 1.0 4686 5290 9969 HBL1_DMSO_200M_050219_1,9978 HBL1_DMSO_200M_050219_1,9978,LLVVYPWTQR False True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 9979 52.138 55.0 935020.0 25 0 120110.0 + 41792 VPVPSQQEI 9 94 498.7717543279881 995.528955722776 2 498.7717468142509 MULTI CID FTMS 0 0 0 9969 692318.125 1.0 0 0.0 10 Unmodified _VPVPSQQEI_ ENSG00000240682|ENST00000393295|ISY1;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 37.97399986684836 0.0865783450051559 3 [VP]V[PS]QQE{I|L} 9 0 + 61.66 0.0 0.0 6.1937 6.1937 88.345 0.0 0.0 0.0 14.672488015064928 37.87478848885982 14.672488015064928 9.208187539523747 0 0.4247425010840047 1.154901959985743 0.6989700043360187 0.0 + + [VP]V[PS]QQE{I|L};[VP]V[PS]Q[AG]E{I|L};[VP]V[PS][AG]QE{I|L};[AG]SPQVPVE{I|L};[VP]{[QS]|[NT]}QPVE{I|L};[AG]SPQVPEV{I|L};[PS]QQVPVE{I|L};[VP]{[QS]|[NT]}[VP]QE{I|L};{[SA]|[TG]}GPQVPVE{I|L};{[QS]|[NT]}PQVPVE{I|L} 6.1937;5.2687;5.2687;4.4275;4.2307;4.1251;4.1096;4.0847;4.0054;3.954 +;-;-;-;-;-;-;-;-;- + 935 1 1.627 43815.4 1.0 4687 5290 9969 HBL1_DMSO_200M_050219_1,9979 HBL1_DMSO_200M_050219_1,9979,VPVPSQQEI True True VPVPSQQEI 52.138032 498.771746814251 5672543.5 9969.0 ENSG00000240682|ENST00000393295|ISY1;;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;;nc|ENSG00000240682|Q9ULR0-2|ISY1;;nc|ENSG00000240682|Q9ULR0-1|ISY1 2.555409669876098 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9980 52.139 58.0 1585600.0 25 0 182030.0 + 36418 SYWNHREL 8 90 368.8457807415064 1103.5155128247193 3 368.8458434939384 MULTI CID FTMS 0 0 0 9969 665489.6875 0.7685571386480374 -1 0.1566047668457031 11 Unmodified _SYWNHREL_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 31.26834338654808 0.3863233259196171 3 HNW[MT] 5 7 29.125 0.0 0.0 2.6393 0.0 0.0 416.2378712384781 0.0 416.2378712384781 0.0 12.67097795568553 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.9247425010840048 HNW[MT] 2.6393 - 92 1 1.627 77861.9 1.0 4688 5290 9969 HBL1_DMSO_200M_050219_1,9980 HBL1_DMSO_200M_050219_1,9980,SYWNHREL False True SYWNHREL 52.139474 368.845843493938 12529251.5 9969.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 7.344586213429769 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9981 52.141 49.0 841530.0 25 0 66484.0 + 16981 KIWDPVHRV 9 75 383.88899327658464 1148.645150429954 3 383.8890258669853 MULTI CID FTMS 0 0 0 9969 638689.4375 1.0 0 0.0 12 Unmodified _KIWDPVHRV_ ENSG00000134900|ENST00000376052|TPP2;nc|ENSG00000134900|P29144|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 15.738622578938676 0.4106572216562794 3 DPVV[RH] 6 5 28.522 0.0 0.0 2.4831 0.0 0.0 427.2581397871789 0.0 427.2581397871789 0.0 23.918023705413543 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.0 DPVV[RH] 2.4831 - 71 + 1 1.627 44592.7 1.0 4689 5290 9969 HBL1_DMSO_200M_050219_1,9981 HBL1_DMSO_200M_050219_1,9981,KIWDPVHRV False True KIWDPVHRV 52.140768 383.889025866985 4786313.5 9969.0 nc|ENSG00000134900|P29144|TPP2;;ENSG00000134900|ENST00000376052|TPP2;;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 3.9654947916666665 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9982 52.142 53.0 882570.0 25 0 83686.0 + 4688 DAYYKLRHI 9 80 393.54876723836975 1177.6244723153093 3 393.5485412478447 MULTI CID FTMS 0 0 0 9969 611840.375 0.903060015377796 -1 0.1566047668457031 13 Unmodified _DAYYKLRHI_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000587957.1_1_17:42953300-42956953:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 25.399314129420983 0.2080152500878129 3 {[DA]|[EG]}YYK{I|L}RH{I|L} 9 0 + 58.861 0.0 0.0 4.9983 4.9983 77.304 0.0 0.0 0.0 39.90832368587756 7.090119426301591 7.090119426301591 3.0102999566398125 0 0.3054621874040891 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YYK{I|L}RH{I|L};{[DA]|[EG]}YY{I|L}KRH{I|L};{[DA]|[EG]}Y{I|L}YKRH{I|L};{[DA]|[EG]}{I|L}YYKRH{I|L};{[DA]|[EG]}Y{I|L}[W{I|L}]{[RE]|[WV]}{I|L};{[DA]|[EG]}{I|L}Y[W{I|L}]{[RE]|[WV]}{I|L} 4.9983;4.7426;4.487;4.2314;1.9199;1.6642 +;-;-;-;-;- + 94 + 1 1.627 41572.2 1.0 4690 5290 9969 HBL1_DMSO_200M_050219_1,9982 HBL1_DMSO_200M_050219_1,9982,DAYYKLRHI False True DAYYKLRHI 52.142138 393.548541247845 5249305.5625 9969.0 nc|ENSG00000108883|Q15029-3|EFTUD2;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2;;ENST00000587957.1_1_17:42953300-42956953:-|nuORF 6.670588811238607 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9983 52.147 248.0 454790.0 25 0 36777.0 + 23111 LSPAVQSL 8 127 407.737195506933 813.459838080666 2 407.7370483279228 MULTI CID FTMS 0 0 0 9969 602226.625 1.0 0 0.0 14 Unmodified _LSPAVQSL_ REV__ENSG00000158715|ENST00000367145|SLC45A3;REV__ENST00000460934.1_1_1:205628364-205631520:-|nuORF 44.40701690623563 0.1655546087385432 3 [TP]VSQ 5 -1 35.623 0.0 0.0 4.3791 0.0 0.0 0.0 298.1786240516223 298.1786240516223 16.8372941134762 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.6237125054200234 0.0 [TP]VSQ 4.3791 - 440 1 1.627 95907.0 1.0 4691 5290 9969 HBL1_DMSO_200M_050219_1,9983 HBL1_DMSO_200M_050219_1,9983,LSPAVQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9984 52.148 67.0 851840.0 25 0 120370.0 + 42118 VRPPLPLH 8 76 310.19557013354085 927.5648810008228 3 310.1953307986259 MULTI CID FTMS 0 0 0 9969 532878.4375 1.0 0 0.0 15 Unmodified _VRPPLPLH_ REV__ENST00000355803.8_1_16:1374828-1375008:+|nuORF 3.944395688203298 0.8003900995685364 3 [RP][{I|L}P]PHV{I|L} 8 -1 [RP][{I|L}P]PHV + + 10.713 10.59 1.3296 1.155 1.155 48.401 0.0 0.0 0.0 0.0 -13.90092514408778 -13.90092514408778 0.0 0 0.0 0.0 0.0 0.0 [RP][{I|L}P]PHV{I|L} 1.155 - 25 + 1 1.627 53483.4 1.0 4692 5290 9969 HBL1_DMSO_200M_050219_1,9984 HBL1_DMSO_200M_050219_1,9984,VRPPLPLH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9985 52.157 503.0 76851.0 25 0 3208.7 + 38035 TPDAKKDRTRV 11 90 643.864097049066 0 643.8646728396416 PEAK CID FTMS 0 0 0 9969 425545.0625 1.0 0 0.0 16 Unmodified _TPDAKKDRTRV_ REV__nc|ENSG00000171862|P60484-3|PTEN 13.042465956692816 0.4221659143281722 3 VYWEN 5 -1 31.146 0.0 0.0 2.4225 0.0 0.0 325.23404019012565 266.1521395318969 591.3861797220226 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.2742275032520141 0.6237125054200234 VYWEN 2.4225 - 228 + 1 1.627 37027.8 1.0 4693 5290 9969 HBL1_DMSO_200M_050219_1,9985 HBL1_DMSO_200M_050219_1,9985,TPDAKKDRTRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9986 52.159 106.0 442620.0 25 0 57367.0 + -1 MTMKPMKFG 9 53 551.7589325264194 1101.5033121196386 2 552.7635986208916 MULTI CID FTMS 0 0 0 9969 430641.15625 0.8390421372097817 3 -0.2811012268066406 17 2 Oxidation (M) _M(Oxidation (M))TM(Oxidation (M))KPMKFG_ REV__ENSG00000105227|ENST00000324001|PRX;REV__ENST00000291825.11_2_19:40899875-40904000:-|nuORF;REV__nc|ENSG00000105227|Q9BXM0-3|PRX 4.75600775471527 0.7486543447549536 3 HNWDD 5 -1 30.713 0.0 0.0 2.7883 0.0 0.0 416.23887831855626 0.0 416.23887831855626 0.0 18.010299956639813 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 HNWDD 2.7883 - 29 1 1.627 41629.9 1.0 4694 5290 9969 HBL1_DMSO_200M_050219_1,9986 HBL1_DMSO_200M_050219_1,9986,MTMKPMKFG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 9987 52.171 636.0 11569.0 25 0 704.64 -1 0 24 1037.9746395491738 2073.934726165148 2 1038.476855456829 MULTI CID FTMS 0 0 0 9969 403575.46875 1.0 0 0.0 18 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.627 14669.1 1.0 4695 5290 9969 HBL1_DMSO_200M_050219_1,9987 HBL1_DMSO_200M_050219_1,9987, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 9988 52.177 269.0 384620.0 25 0 36784.0 + 23621 LTQAFRRSI 9 141 546.3183034401958 1090.6220539471915 2 546.3182250857353 MULTI CID FTMS 0 0 0 9969 410616.4375 1.0 0 0.0 19 Unmodified _LTQAFRRSI_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 32.30548876998284 0.1201446275138228 3 {I|L}TSSAVT 7 7 69.941 0.0 0.0 6.4129 0.0 0.0 0.0 428.2509859674438 428.2509859674438 57.94025799827309 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {I|L}TSSAVT 6.4129 - 405 + 1 1.627 84779.4 1.0 4696 5290 9969 HBL1_DMSO_200M_050219_1,9988 HBL1_DMSO_200M_050219_1,9988,LTQAFRRSI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9989 52.179 81.0 277170.0 25 0 39812.0 + 25740 NIPDEELKRV 10 43 404.8908771302425 1211.6508019909274 3 404.8906432986259 MULTI CID FTMS 0 0 0 9969 379302.15625 1.0 0 0.0 20 Unmodified _NIPDEELKRV_ ENSG00000087053|ENST00000346299|MTMR2;nc|ENSG00000087053|Q13614-2|MTMR2 21.59015148037692 0.4836074274810599 3 {[QV]|[N{I|L}]|[RA]|[KV]}PDEE{I|L}K[RV] 10 0 + 57.867 0.0 0.0 4.7759 4.7759 87.917 0.0 0.0 0.0 37.40926274548464 4.884381005764311 4.884381005764311 57.86683765109139 0 0.3252574989159953 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PDEE{I|L}K[RV] 4.7759 + + 43 + 1 1.627 25196.3 1.0 4697 5290 9969 HBL1_DMSO_200M_050219_1,9989 HBL1_DMSO_200M_050219_1,9989,NIPDEELKRV False True NIPDEELKRV 52.178611 404.890643298626 13806707.625 9969.0 nc|ENSG00000087053|Q13614-2|MTMR2;;ENSG00000087053|ENST00000346299|MTMR2 8.839133262634277 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9991 52.183 56.0 1216800.0 25 0 140270.0 + 4596 DAYTHPQF 8 101 489.7196668198748 977.4247807065497 2 489.7195617556572 MULTI CID FTMS 0 0 0 9990 764965.1875 0.6117766873483922 1 -0.1193313598632812 1 Unmodified _DAYTHPQF_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 39.957323273325 0.2350051964751539 3 {[DA]|[EG]}Y[HT]PQ{M(Oxidation (M))|F} 8 0 + 56.604 0.0 0.0 5.7911 5.7911 89.578 0.0 0.0 0.0 36.35615093082315 15.5628209084511 15.5628209084511 16.876531584792495 0 0.805462187404089 2.0 0.0 0.7614393726401688 + + {[DA]|[EG]}Y[HT]PQ{M(Oxidation (M))|F};{[DA]|[EG]}Y[HT]P[AG]{M(Oxidation (M))|F};{[DA]|[EG]}Y[HT][VG]C{I|L};{[DA]|[EG]}Y[HT]{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;W[HA][WY]C{I|L} 5.7911;4.0645;3.3823;3.3025;0.44226 +;-;-;-;- + 238 + 1 1.627 57554.1 1.0 4698 5291 9990 HBL1_DMSO_200M_050219_1,9991 HBL1_DMSO_200M_050219_1,9991,DAYTHPQF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9992 52.186 128.0 1468600.0 25 0 238490.0 + 39908 VFPTRTARF 9 105 365.5419939335199 1093.6041524007596 3 365.5417053103447 MULTI CID FTMS 0 0 0 9990 732987.875 0.8072171972594633 -2 0.2265472412109375 2 Unmodified _VFPTRTARF_ ENSG00000213339|ENST00000250237|QTRT1 36.12702656103203 0.0967173616627612 3 V{M(Oxidation (M))|F}{M(Oxidation (M))|F}R 4 6 40.745 0.0 0.0 3.7258 0.0 0.0 0.0 541.2795504205686 541.2795504205686 26.7659970366416 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.8494850021680094 V{M(Oxidation (M))|F}{M(Oxidation (M))|F}R 3.7258 - 115 + 1 1.627 161628.1 1.0 4699 5291 9990 HBL1_DMSO_200M_050219_1,9992 HBL1_DMSO_200M_050219_1,9992,VFPTRTARF True True VFPTRTARF 52.185628 365.541705310345 31311828.0 9990.0 ENSG00000213339|ENST00000250237|QTRT1 5.908268292744954 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9993 52.187 45.0 1996200.0 25 0 302990.0 + 12595 GVINRVEKI 9 72 343.21365012141644 1026.6191209644494 3 343.2132751345634 MULTI CID FTMS 0 0 0 9990 1045776.625 0.836814436772007 -1 0.0699424743652343 3 Unmodified _GVINRVEKI_ ENSG00000087053|ENST00000346299|MTMR2;nc|ENSG00000087053|Q13614-2|MTMR2 24.020572477871973 0.2255576514309169 3 [VG]{I|L}{I|L}[MT][PA]{I|L}{I|L} 10 6 + 42.663 0.0 0.0 4.1556 4.1556 85.665 0.0 0.0 0.0 27.416892907146178 0.7513497213259512 0.7513497213259512 42.66257482205354 0 0.3252574989159953 2.0 0.8494850021680094 0.0 [VG]{I|L}{I|L}[MT][PA]{I|L}{I|L} 4.1556 - 148 + 1 1.627 79232.3 1.0 4700 5291 9990 HBL1_DMSO_200M_050219_1,9993 HBL1_DMSO_200M_050219_1,9993,GVINRVEKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9994 52.188 33.0 1687800.0 25 0 152000.0 + + 23553 RQHEIVLKV 9 80 374.2295324906944 1119.6667680722833 3 374.5640441775322 MULTI CID FTMS 0 0 0 9990 958868.0 1.0 0 0.0 4 Unmodified _LTLQYKQKV_ ENSG00000069248|ENST00000261396|NUP133 7.289230182591677 0.6602208344931196 3 {[{M(Oxidation (M))|F}H]|[RQ]}HT{I|L}V{I|L} 7 -1 20.934 0.0 0.0 1.8697 0.0 0.0 0.0 269.1397654690208 269.1397654690208 7.404333180576383 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}HT{I|L}V{I|L} 1.8697 - 188 1 1.627 57629.5 1.0 4701 5291 9990 HBL1_DMSO_200M_050219_1,9994 HBL1_DMSO_200M_050219_1,9994,LTLQYKQKV False False RQHEIVLKV 52.188044 374.564044177532 7910788.0 9990.0 ENSG00000069248|ENST00000261396|NUP133 7.034061590830485 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9995 52.189 57.0 961760.0 25 0 141860.0 -1 EGVKLCTMG 9 95 497.7367026095872 993.4588522859744 2 497.7379333376884 MULTI CID FTMS 0 0 0 9990 718653.0625 0.6036700001795504 -1 0.0699424743652343 5 Carbamidomethyl (C) _EGVKLC(Carbamidomethyl (C))TMG_ ENSG00000185532|ENST00000373980|PRKG1;nc|ENSG00000185532|Q13976|PRKG1 27.628801355627647 0.1796483985696185 3 {[DA]|[EG]}VW[YN]N{I|L} 8 -1 + 50.498 0.0 0.0 5.0831 5.0831 85.234 0.0 0.0 0.0 34.74067050357411 9.300442355934903 9.300442355934903 9.262137858390815 0 0.8494850021680094 2.0 0.0 0.6139829889124311 {[DA]|[EG]}VW[YN]N{I|L};{[DA]|[EG]}V{[DA]|[EG]}[YN]N{I|L};{[DA]|[EG]}VW[YN]GG{I|L};{[DA]|[EG]}VW[YN]A[VG];{[DA]|[EG]}V[{I|L}V][HT][HC];{[DA]|[EG]}V{[DA]|[EG]}[YN]A[VG];{[SA]|[TG]}[PG]Q[HN]{[{M(Oxidation (M))|F}H]|[RQ]};{[SA]|[TG]}[PG]{[YC]|[HE]}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{NN|[MP]|[D{I|L}]|[EV]}G[{I|L}V][HT][HC] 5.0831;4.1508;3.8601;3.1566;2.2489;2.2297;0.30428;0.24249;0.076673 -;-;-;-;-;-;-;-;- 283 + 1 1.627 46028.4 1.0 4702 5291 9990 HBL1_DMSO_200M_050219_1,9995 HBL1_DMSO_200M_050219_1,9995,EGVKLCTMG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9996 52.191 81.0 901890.0 25 0 91962.0 13115 HETGTCCV 8 91 425.1639421193535 848.3133313055071 2 425.1638061404228 MULTI CID FTMS 0 0 0 9990 682889.9375 0.2561712330546412 -1 0.0699424743652343 6 Unmodified _HETGTCCV_ ENST00000574377.5_1_17:6905805-6915525:-|nuORF;ENST00000575727.5_1_17:6905805-6915601:-|nuORF 5.230669730166228 0.792582437072536 3 V 1 7 15.485 0.0 0.0 1.8253 0.0 0.0 731.2338081505251 0.0 731.2338081505251 0.0 -3.160612466810594 -3.160612466810594 0.0 0 0.0 0.0 0.0 0.0 + V 1.8253 + + 21 + 1 1.627 62915.2 1.0 4703 5291 9990 HBL1_DMSO_200M_050219_1,9996 HBL1_DMSO_200M_050219_1,9996,HETGTCCV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 9997 52.193 81.0 1248100.0 25 0 187770.0 + 21268 LPEDKPRLI 9 87 360.88533721187406 1079.6341822358222 3 360.8849670290947 MULTI CID FTMS 0 0 0 9990 572672.8125 0.0522108532891071 -3 0.3412704467773437 7 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 49.55428908609986 0.0413471690215031 3 {I|L}PEDK{I|L}RP{I|L} 9 2 + 71.688 0.0 0.0 6.64 6.64 80.121 0.0 0.0 0.0 26.592699806665664 6.10988831077951 6.10988831077951 1.4220428854660838 0 0.7429928190999391 1.3010299956639813 0.8494850021680094 0.7059771852360797 {I|L}PEDK{I|L}RP{I|L};{I|L}PEDKPR{I|L}{I|L};{I|L}PED{I|L}KRP{I|L};{I|L}PE{I|L}DKRP{I|L};{I|L}P{I|L}EDKRP{I|L};{I|L}PWW{I|L}RP{I|L};{I|L}PWWPR{I|L}{I|L};{I|L}{I|L}PEDKRP{I|L};{I|L}P{I|L}WWRP{I|L};{I|L}{I|L}PWWRP{I|L} 6.64;6.5083;5.7811;5.5023;4.8708;3.4426;3.3109;3.1541;2.8625;1.2155 -;+;-;-;-;-;-;-;-;- + 281 + 1 1.627 93634.2 1.0 4704 5291 9990 HBL1_DMSO_200M_050219_1,9997 HBL1_DMSO_200M_050219_1,9997,LPEDKPRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9998 52.197 220.0 768640.0 25 0 113610.0 + 4054 DALVTKNL 8 140 437.2558657039842 872.4971784747685 2 437.2559387087822 MULTI CID FTMS 0 0 0 9990 540637.9375 1.0 0 0.0 8 Unmodified _DALVTKNL_ ENSG00000105202|ENST00000221801|FBL;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 85.27202061508552 0.0687763219216887 3 {[DA]|[EG]}{I|L}VTKQV 8 2 + 87.904 0.0 0.0 10.075 10.075 84.167 0.0 0.0 0.0 23.098943791441968 0.6694678963061307 0.6694678963061307 0.6694678963061307 0 1.4489700043360187 2.0 0.6549471895720985 1.2530834337684311 {[DA]|[EG]}{I|L}VTKQV;{[DA]|[EG]}{I|L}VTKN{I|L};{[DA]|[EG]}{I|L}VTK[AG]V;{[DA]|[EG]}{I|L}VTKGG{I|L};{[DA]|[EG]}{I|L}V[KQ]TV;{[DA]|[EG]}{I|L}V[KQ]S{I|L};N[KG]VTKQV;N[KG]VTKN{I|L};{[DA]|[EG]}{I|L}V{I|L}{[ET]|[MV]}{I|L};N[KG]VTK[AG]V 10.075;9.9983;8.7138;8.637;7.5707;7.494;7.2959;7.2192;6.4764;5.9347 -;+;-;-;-;-;-;-;-;- + 979 + 1 1.627 132476.0 1.0 4705 5291 9990 HBL1_DMSO_200M_050219_1,9998 HBL1_DMSO_200M_050219_1,9998,DALVTKNL True True DALVTKNL 52.197286 437.255938708782 3646832.0 9990.0 ENSG00000105202|ENST00000221801|FBL;;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 4.876690864562988 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 9999 52.202 281.0 686550.0 25 0 67809.0 + 12596 GVINRVEKI 9 172 514.3168100509499 1026.6190671686998 2 514.3168212771416 MULTI CID FTMS 0 0 0 9990 419811.46875 1.0 0 0.0 9 Unmodified _GVINRVEKI_ ENSG00000087053|ENST00000346299|MTMR2;nc|ENSG00000087053|Q13614-2|MTMR2 89.40071534611396 0.0152361884002446 3 [VG]{I|L}NRVEK{I|L} 9 0 + 66.599 0.0 0.0 6.4873 6.4873 83.956 0.0 0.0 0.0 4.240824471448256 4.240824471448256 4.240824471448256 4.240824471448256 0 2.1237125054200234 2.0 0.8494850021680094 0.6109243748081782 + + [VG]{I|L}NRVEK{I|L};[VG]ARRVEK{I|L};[VG]{I|L}NRVE{I|L}K;[VG]{I|L}GGRVEK{I|L};[PS]N[K{I|L}]VEK{I|L};[VG]{I|L}NR{I|L}RS{I|L};[VG]{I|L}NGV{I|L}RS{I|L};[VG]{I|L}GGRVE{I|L}K;{I|L}RNRVEK{I|L};[PS]N[K{I|L}]S{I|L}R{I|L} 6.4873;6.0742;5.758;5.5903;5.2553;5.1769;5.1324;4.861;4.7648;4.5316 +;-;-;-;-;-;-;-;-;- + 2665 + 1 1.627 148959.9 1.0 4706 5291 9990 HBL1_DMSO_200M_050219_1,9999 HBL1_DMSO_200M_050219_1,9999,GVINRVEKI True True GVINRVEKI 52.202473 514.316821277142 12092006.75 9990.0 nc|ENSG00000087053|Q13614-2|MTMR2;;ENSG00000087053|ENST00000346299|MTMR2 4.846073071161906 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10000 52.213 574.0 372910.0 25 0 34431.0 + 10822 FYYEQAPSA 9 169 538.2403514946653 1074.4661500561306 2 538.2402831912041 MULTI CID FTMS 0 0 0 9990 301044.8125 0.6506060940262761 -2 0.2265472412109375 10 Unmodified _FYYEQAPSA_ ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000394455.6_1_14:68196461-68236507:-|nuORF;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-3|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 81.61307344734483 0.0171259190214613 3 [PS]A{M(Oxidation (M))|F}AEQA 8 7 55.911 0.0 0.0 5.2037 0.0 0.0 0.0 270.1082204992326 270.1082204992326 15.192262960582989 0.0 0.0 0.0 0 0.9247425010840048 1.3010299956639813 1.0596120028589544 0.3494850021680094 [PS]A{M(Oxidation (M))|F}AEQA 5.2037 - 3413 1 1.627 172418.5 1.0 4707 5291 9990 HBL1_DMSO_200M_050219_1,10000 HBL1_DMSO_200M_050219_1,10000,FYYEQAPSA True True FYYEQAPSA 52.212546 538.240283191204 8553213.0 9990.0 ENST00000394455.6_1_14:68196461-68236507:-|nuORF;;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;;ENSG00000072121|ENST00000347230|ZFYVE26;;nc|ENSG00000072121|Q68DK2-5|ZFYVE26;;nc|ENSG00000072121|Q68DK2-3|ZFYVE26 7.217281023661296 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10001 52.217 218.0 624170.0 25 0 37012.0 + 12702 GVLQIVTFQ 9 147 502.79392335962655 1003.5732937860532 2 502.7942382693291 MULTI CID FTMS 0 0 0 9990 289618.65625 0.6131800878835726 1 -0.1193313598632812 11 Unmodified _GVLQIVTFQ_ REV__ENSG00000044524|ENST00000336596|EPHA3;REV__ENSG00000133216|ENST00000374630|EPHB2;REV__ENSG00000135333|ENST00000369303|EPHA7;REV__ENSG00000145242|ENST00000613740|EPHA5;REV__ENSG00000154928|ENST00000398015|EPHB1;REV__ENSG00000182580|ENST00000330394|EPHB3;REV__ENSG00000196411|ENST00000358173|EPHB4;REV__ENST00000487222.5_1_7:100401085-100421908:-|nuORF;REV__nc|ENSG00000133216|P29323-3|EPHB2;REV__nc|ENSG00000133216|P29323|EPHB2;REV__nc|ENSG00000135333|Q15375-2|EPHA7;REV__nc|ENSG00000135333|Q15375-4|EPHA7;REV__nc|ENSG00000145242|P54756-2|EPHA5;REV__nc|ENSG00000145242|P54756-3|EPHA5;REV__nc|ENSG00000145242|P54756|EPHA5;REV__nc|ENSG00000154928|P54762-5|EPHB1 13.90604991867851 0.4602628045680013 3 T{M(Oxidation (M))|F}Q 3 -1 23.557 0.0 0.0 2.3473 0.0 0.0 609.3849831699821 0.0 609.3849831699821 0.0 8.322894994802343 0.0 0.0 0 0.8851518780601924 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}Q 2.3473 + + 538 1 1.627 106465.5 1.0 4708 5291 9990 HBL1_DMSO_200M_050219_1,10001 HBL1_DMSO_200M_050219_1,10001,GVLQIVTFQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10002 52.221 215.0 619630.0 25 0 61350.0 + + 30362 FPPPSANKI 9 130 485.7677648044928 969.5209766757856 2 485.7710754275322 MULTI CID FTMS 0 0 0 9990 274786.46875 0.058750364134429 16 -1.803546905517578 12 Unmodified _RAGLSQLPE_ ENSG00000077063|ENST00000160373|CTTNBP2 23.78978130925829 0.2284941198415988 3 {[QN]|[E{I|L}]|[KN]}GV[DV]{I|L}PE 9 -1 + 46.155 0.0 0.0 4.7606 4.7606 72.038 0.0 0.0 0.0 0.3822145512995831 0.3822145512995831 0.3822145512995831 0.3822145512995831 0 0.0 0.8538719643217619 1.1307196863200843 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}GV[DV]{I|L}PE;{M(Oxidation (M))|F}P{I|L}[DV]PPSV;[PS]{I|L}T[DV]{I|L}PE;{M(Oxidation (M))|F}P{I|L}[DV]PSPV;{[QN]|[E{I|L}]|[KN]}G[KG]Q{I|L}PE;{M(Oxidation (M))|F}P{I|L}[DV]PV[PS];[{I|L}T]SP[DV]{I|L}PE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PG[{I|L}T]{I|L}PE;[VG]{[QN]|[E{I|L}]|[KN]}[DV]{I|L}PE;{[DS]|[MA]|[CV]|TT}PV[DV]{I|L}PE 4.7606;4.7212;4.677;4.2503;4.1718;4.1654;4.0468;3.6877;3.6733;3.5694 -;-;-;-;-;-;-;-;-;- 1019 1 1.627 101865.6 1.0 4709 5291 9990 HBL1_DMSO_200M_050219_1,10002 HBL1_DMSO_200M_050219_1,10002,RAGLSQLPE False False FPPPSANKI 52.220728 485.771075427532 4287085.0 9990.0 ENSG00000077063|ENST00000160373|CTTNBP2 4.809496402740479 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10003 52.232 619.0 487750.0 25 0 48607.0 + 13436 HLPPTFHAV 9 219 509.7783629833229 1017.5421730334458 2 509.7775451540947 MULTI CID FTMS 0 0 0 9990 286204.65625 0.2335873292361678 -7 0.7219696044921875 13 Unmodified _HLPPTFHAV_ ENSG00000105808|ENST00000262940|RASA4;ENSG00000170667|ENST00000465829|RASA4B;ENST00000427076.5_1_7:44005990-44026228:-|nuORF;ENST00000454572.1_1_7:44005962-44058742:-|nuORF;ENST00000521892.1_7:102249786-102257136:-|nuORF;ENST00000522443.1_7:102249007-102257136:-|nuORF;ENST00000523568.1_7:102240831-102257136:-|nuORF;nc|ENSG00000105808|O43374-2|RASA4 64.23631603340823 0.0237365939569086 3 H{I|L}PPT{M(Oxidation (M))|F}HAV 9 0 + 64.388 0.0 0.0 6.3278 6.3278 84.655 0.0 0.0 0.0 5.108927203139146 5.108927203139146 5.108927203139146 5.108927203139146 0 1.7302046884880935 2.0 0.3807196863200844 0.0 + + H{I|L}PPT{M(Oxidation (M))|F}HAV;[H{I|L}][MT]P{I|L}HAV;H{I|L}PPT{M(Oxidation (M))|F}HG{I|L};H{I|L}V[VS]HNNV;[TA][RN]H{I|L}HAV;H{I|L}[{I|L}T]AHNNV;H{I|L}PP[WR]NV;H{I|L}V[EP]PMPV;[TP]P{M(Oxidation (M))|F}H{I|L}HAV;[{I|L}P][MT]H{I|L}HAV 6.3278;5.8257;5.4313;5.391;5.1254;4.9948;4.889;4.7128;4.6454;4.6034 +;-;-;-;-;-;-;-;-;- + 4320 + 1 1.627 229516.1 1.0 4710 5291 9990 HBL1_DMSO_200M_050219_1,10003 HBL1_DMSO_200M_050219_1,10003,HLPPTFHAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10004 52.235 188.0 634800.0 25 0 44336.0 + 2149 APYPTPAQV 9 129 472.24781435238816 942.4810757715765 2 472.2480651736259 MULTI CID FTMS 0 0 0 9990 249842.125 0.0506108692521124 -9 0.8218307495117188 14 Unmodified _APYPTPAQV_ ENSG00000198807|ENST00000361487|PAX9 63.562846038646086 0.0241094678104353 3 [PA]TPY[PA]{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 40.829 0.0 0.0 4.3321 4.3321 78.515 0.0 0.0 0.0 5.718104277945876 8.94315270321487 5.718104277945876 5.718104277945876 0 0.6109243748081782 1.154901959985743 1.0451140161145327 0.0 [PA]TPY[PA]{[QV]|[N{I|L}]|[RA]|[KV]};[TP]APY[PA]{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{[ET]|[MV]}A[PA]{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TPA[PA]{[QV]|[N{I|L}]|[RA]|[KV]};[TP]YPA[PA]{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PTA[PA]{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}[WP]W{[QV]|[N{I|L}]|[RA]|[KV]};[PA]Y[TP][PA]{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}[KG]{[{M(Oxidation (M))|F}H]|[RQ]}{[QV]|[N{I|L}]|[RA]|[KV]};[PA]TPA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]} 4.3321;3.7254;3.6542;3.5838;3.4609;3.313;3.0961;3.0064;2.7679;2.5916 -;-;-;-;-;-;-;+;-;- + 1209 1 1.627 96952.6 1.0 4711 5291 9990 HBL1_DMSO_200M_050219_1,10004 HBL1_DMSO_200M_050219_1,10004,APYPTPAQV True True APYPTPAQV 52.235142 472.248065173626 411388704.0 9990.0 ENSG00000198807|ENST00000361487|PAX9 6.477787017822266 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10005 52.237 110.0 404240.0 25 0 29461.0 -1 LMPLLMDV 8 85 482.24844485250657 962.4823367718132 2 482.2480651736259 MULTI CID FTMS 0 0 0 9990 221816.953125 0.6183320805202387 1 -0.1193313598632812 15 2 Oxidation (M) _LM(Oxidation (M))PLLM(Oxidation (M))DV_ ENSG00000106410|ENST00000467773|NOBOX;nc|ENSG00000106410|O60393-2|NOBOX 11.114462752807354 0.7467182956244686 3 [AG]SAA{I|L}{I|L} 7 -1 13.477 0.0 0.0 1.4002 0.0 0.0 0.0 376.1236691294882 376.1236691294882 1.258651666525452 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [AG]SAA{I|L}{I|L} 1.4002 - 139 1 1.627 39878.9 1.0 4712 5291 9990 HBL1_DMSO_200M_050219_1,10005 HBL1_DMSO_200M_050219_1,10005,LMPLLMDV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10006 52.251 706.0 250440.0 25 0 18272.0 + 4689 DAYYKLRHI 9 171 589.8195338959674 1177.6245148587348 2 589.8196899294853 MULTI CID FTMS 0 0 0 9990 185703.28125 1.0 0 0.0 16 Unmodified _DAYYKLRHI_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000587957.1_1_17:42953300-42956953:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 51.629811660486645 0.0367964933207742 3 DAYYK{I|L}RH{I|L} 9 0 + 86.583 0.0 0.0 7.3523 7.3523 84.195 0.0 0.0 0.0 15.686362358410122 2.8179180513490394 2.8179180513490394 2.8179180513490394 0 1.5994850021680094 1.5228787452803376 0.0 0.4247425010840047 + + DAYYK{I|L}RH{I|L};DAYYK{I|L}R{I|L}H;DAYYK{I|L}{I|L}RH;DAY{I|L}[YK]RH{I|L};DAY{I|L}[YK]R{I|L}H;DA{I|L}Y[YK]RH{I|L};DA{I|L}Y[YK]R{I|L}H;DAY{I|L}[YK]{I|L}RH;{I|L}EGY[YK]RH{I|L};DA{I|L}Y[YK]{I|L}RH 7.3523;7.113;5.9671;5.2499;5.0106;4.4201;4.1809;3.8647;3.1759;3.0349 +;-;-;-;-;-;-;-;-;- + 442 + 1 1.627 134416.7 1.0 4713 5291 9990 HBL1_DMSO_200M_050219_1,10006 HBL1_DMSO_200M_050219_1,10006,DAYYKLRHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10007 52.255 242.0 186380.0 25 0 14389.0 -1 LPPPPPPAM 9 90 466.747824258661 931.4810955841222 2 466.7643005251884 MULTI CID FTMS 0 0 0 9990 76362.125 0.4918049052929766 -4 0.427215576171875 17 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 45.7499826716795 0.0496882803020414 3 [{M(Oxidation (M))|F}V]SP 4 -1 34.654 0.0 0.0 3.7203 0.0 0.0 0.0 498.27070032291255 498.27070032291255 16.72930528090205 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]SP 3.7203 - 125 + 1 1.627 38531.4 1.0 4714 5291 9990 HBL1_DMSO_200M_050219_1,10007 HBL1_DMSO_200M_050219_1,10007,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10008 52.269 800.0 143750.0 25 0 14397.0 + 25742 NIPDEELKRV 10 103 606.8325053902555 1211.650457847311 2 606.8325683474541 MULTI CID FTMS 0 0 0 9990 149684.625 0.8192503236656803 -1 0.0699424743652343 18 Unmodified _NIPDEELKRV_ ENSG00000087053|ENST00000346299|MTMR2;nc|ENSG00000087053|Q13614-2|MTMR2 21.59015148037692 0.4836074274810599 3 {[QV]|[N{I|L}]|[RA]|[KV]}PDEE{I|L}KRV 10 0 + 44.0 0.0 0.0 3.6314 3.6314 84.256 0.0 0.0 0.0 33.757789778962874 1.5739076038943836 1.5739076038943836 44.00006481148301 0 0.3252574989159953 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PDEE{I|L}KRV 3.6314 + + 127 + 1 1.627 88747.6 0.800000011920929 4715 5291 9990 HBL1_DMSO_200M_050219_1,10008 HBL1_DMSO_200M_050219_1,10008,NIPDEELKRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10009 52.283 800.0 760970.0 25 0 130870.0 + 21271 LPEDKPRLI 9 196 540.824141441904 1079.633729950608 2 540.8246948122978 MULTI CID FTMS 0 0 0 9990 149583.140625 0.0398349275646957 -3 0.3412704467773437 19 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 93.16586880292088 0.0136995152735431 3 {I|L}PEDKPR{I|L}{I|L} 9 0 + 103.3 0.0 0.0 9.568 9.568 98.623 0.0 0.0 0.0 60.824764825334064 12.091002556101046 12.091002556101046 36.22352053921928 0 2.360924374808178 1.6989700043360187 0.8494850021680094 1.0730436079169423 + + {I|L}PEDKPR{I|L}{I|L};[{I|L}P]EDKPR{I|L}{I|L};[{I|L}P]EDK[R{I|L}]P{I|L};[EP]{I|L}DKPR{I|L}{I|L};[EP]{I|L}DK[R{I|L}]P{I|L};{I|L}PWWPR{I|L}{I|L};[EP]D{I|L}KPR{I|L}{I|L};{I|L}PE{I|L}[VP][WK]V;[EP]D{I|L}K[R{I|L}]P{I|L};{I|L}PE{I|L}{M(Oxidation (M))|F}[HV]{I|L}{I|L} 9.568;6.2128;6.188;5.9128;5.888;5.452;5.4048;5.3814;5.38;5.3085 +;+;-;-;-;-;-;-;-;- + 1795 + 1 1.627 469841.9 0.7699999809265137 4716 5291 9990 HBL1_DMSO_200M_050219_1,10009 HBL1_DMSO_200M_050219_1,10009,LPEDKPRLI True True LPEDKPRLI 52.283059 540.824694812298 328483592.0 9990.0 ENST00000462869.1_1_3:113795697-113801401:+|nuORF;;nc|ENSG00000151576|Q9H974-3|QTRT2;;ENSG00000151576|ENST00000281273|QTRT2;;nc|ENSG00000151576|Q9H974-4|QTRT2;;nc|ENSG00000151576|Q9H974-2|QTRT2 5.137790520985921 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10010 52.298 800.0 249210.0 25 0 27029.0 + 37272 TIPERGTIGV 10 199 521.7977765470363 0 521.7978393435478 PEAK CID FTMS 0 0 0 9990 136777.71875 0.5590659053790056 1 -0.1193313598632812 20 Unmodified _TIPERGTIGV_ ENST00000412391.6_2_19:36233501-36235273:-|nuORF;ENST00000587987.5_1_19:36233501-36235544:-|nuORF;ENST00000590135.5_1_19:36233501-36233795:-|nuORF;ENST00000591084.5_3_19:36233501-36234996:-|nuORF;ENST00000592913.5_1_19:36233501-36235052:-|nuORF;nc|ENSG00000161265|Q8WU68-2|U2AF1L4 22.65808497894818 0.2768617913208166 3 E 1 9 10.626 0.0 0.0 1.0202 0.0 0.0 827.4489028481756 82.06694971256093 909.5158525607366 0.0 0.0 0.0 0.0 0 0.5 0.0 0.1022338482433752 0.0 + E 1.0202 + + 216 + 1 1.627 159542.8 0.7400000095367432 4717 5291 9990 HBL1_DMSO_200M_050219_1,10010 HBL1_DMSO_200M_050219_1,10010,TIPERGTIGV False True TIPERGTIGV 52.298063 521.797839343548 2517839.25 9990.0 ENST00000592913.5_1_19:36233501-36235052:-|nuORF;;ENST00000412391.6_2_19:36233501-36235273:-|nuORF;;nc|ENSG00000161265|Q8WU68-2|U2AF1L4;;ENST00000591084.5_3_19:36233501-36234996:-|nuORF;;ENST00000590135.5_1_19:36233501-36233795:-|nuORF;;ENST00000587987.5_1_19:36233501-36235544:-|nuORF 0.5640150109926859 2.0 True 10.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 10012 52.302 16.0 3974000.0 25 0 662720.0 + 22012 LPPPPPPAM 9 77 458.7515933437354 915.4886337542708 2 458.7517272830009 MULTI CID FTMS 0 0 0 10011 4303881.5 0.6149539368387482 -2 0.1892738342285156 1 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 79.93452657146344 0.0175326119056068 3 [{I|L}P]PPPP[PA]M 9 0 + 65.116 0.0 0.0 7.1127 7.1127 94.25 0.0 0.0 0.0 27.078343878162336 6.694699959806982 6.694699959806982 23.244171855527966 0 2.305462187404089 1.6989700043360187 0.0 0.0 + + [{I|L}P]PPPP[PA]M;[{I|L}P][YK]P[PA]M;[{I|L}P]P[YK][PA]M;{[HG]|PP}PAPPP{I|L}M;[YK]APPP{I|L}M;{[HG]|PP}PPAPP{I|L}M;[YK]PAPP{I|L}M;{[HG]|PP}PA[YK]{I|L}M;[YK]A[YK]{I|L}M;[PA][YK]PP{I|L}M 7.1127;4.5737;4.4434;2.5108;2.4608;2.182;2.132;0.93386;0.89134;0.30683 +;-;-;-;-;-;-;-;-;- + 348 + 1 1.616 52049.8 1.0 4718 5292 10011 HBL1_DMSO_200M_050219_1,10012 HBL1_DMSO_200M_050219_1,10012,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10013 52.304 50.0 1253400.0 25 0 88428.0 + + 41813 RQGPEGLEV 9 92 492.7592489166072 983.5039449000144 2 492.7591125369072 MULTI CID FTMS 0 0 0 10011 755626.8125 0.302626011516882 2 -0.1929435729980468 2 Unmodified _VPWAIGNEV_ ENSG00000172922|ENST00000308418|RNASEH2C 26.268140514670165 0.1969607489560049 3 G{I|L}EV 4 -1 39.993 0.0 0.0 4.0664 0.0 0.0 567.2779353781934 0.0 567.2779353781934 0.0 29.71523549495286 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 G{I|L}EV 4.0664 - 44 1 1.616 50400.3 1.0 4719 5292 10011 HBL1_DMSO_200M_050219_1,10013 HBL1_DMSO_200M_050219_1,10013,VPWAIGNEV False False RQGPEGLEV 52.30366 492.759112536907 14861271.0 10011.0 ENSG00000172922|ENST00000308418|RNASEH2C 2.176493525505066 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10014 52.305 22.0 2988900.0 25 0 357650.0 39595 VDEDCPEG 8 56 432.15838639429785 862.3022198553957 2 432.1584045290947 MULTI CID FTMS 0 0 0 10011 2313909.0 1.0 0 0.0 3 Unmodified _VDEDCPEG_ ENSG00000099957|ENST00000413302|P2RX6;nc|ENSG00000099957|O15547-2|P2RX6 9.347437153973935 0.7675937258251505 3 VD 2 6 24.776 0.0 0.0 2.8733 0.0 0.0 0.0 645.1855601289398 645.1855601289398 5.31234684152075 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + VD 2.8733 + + 10 + 1 1.616 58675.6 1.0 4720 5292 10011 HBL1_DMSO_200M_050219_1,10014 HBL1_DMSO_200M_050219_1,10014,VDEDCPEG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10015 52.306 55.0 1225700.0 25 0 89840.0 + 35065 SQTTVYEKL 9 107 534.7816004006572 1067.5486478681144 2 534.7820312380791 MULTI CID FTMS 0 0 0 10011 1246856.125 1.0 0 0.0 4 Unmodified _SQTTVYEKL_ ENSG00000118193|ENST00000367350|KIF14 79.59630418116434 0.0176145593575188 3 {[QS]|[NT]}TTVYEK{I|L} 9 0 + 82.864 0.0 0.0 7.7621 7.7621 86.151 0.0 0.0 0.0 18.11674284527305 3.174204118521516 3.174204118521516 3.174204118521516 0 0.8494850021680094 1.0969100130080565 1.5114393726401687 0.4811132596518673 + + {[QS]|[NT]}TTVYEK{I|L};{[QS]|[NT]}TTVYE{I|L}K;{[QS]|[NT]}TT[R{I|L}]{[{M(Oxidation (M))|F}C]|[YS]}{I|L};[YE]K{I|L}{[TV]|[{I|L}S]}TSQ;{[QS]|[NT]}[YR]HHK{I|L};[YE]K{I|L}{[MG]|[TS]}{I|L}SQ;{[QS]|[NT]}[YR]HH{I|L}K;[YE]VT[K{I|L}]TSQ;[YE]VT[KT]{I|L}SQ;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L}{[TV]|[{I|L}S]}TSQ 7.7621;7.4648;3.7013;1.8422;1.7458;1.6798;1.4485;1.0693;0.90685;0.84647 +;-;-;-;-;-;-;-;-;- + 446 + 1 1.616 56884.4 1.0 4721 5292 10011 HBL1_DMSO_200M_050219_1,10015 HBL1_DMSO_200M_050219_1,10015,SQTTVYEKL True True SQTTVYEKL 52.306254 534.782031238079 8390762.0 10011.0 ENSG00000118193|ENST00000367350|KIF14 7.013239701588948 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10016 52.308 59.0 1636800.0 25 0 94705.0 + 7953 ELSQIKQDV 9 128 530.2878129082791 1058.561072883358 2 530.2878295779228 MULTI CID FTMS 0 0 0 10011 1239544.875 0.8374434644785153 1 -0.091827392578125 5 Unmodified _ELSQIKQDV_ REV__ENSG00000132205|ENST00000254528|EMILIN2 52.268347100219714 0.0353964759249114 3 {[QN]|[E{I|L}]|[KN]}SQK{I|L}ENV 9 -1 + 78.648 0.0 0.0 7.4297 7.4297 81.662 0.0 0.0 0.0 1.004505612529513 5.946757120868256 1.004505612529513 1.004505612529513 0 0.9247425010840048 0.7958800173440752 2.0356668758921828 1.048455006504028 {[QN]|[E{I|L}]|[KN]}SQK{I|L}ENV;{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}K{I|L}ENV;{[TV]|[{I|L}S]}EQK{I|L}ENV;[K{I|L}]QDT{I|L}ENV;[TP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}K{I|L}ENV;[{I|L}T]DQK{I|L}ENV;{NN|[MP]|[D{I|L}]|[EV]}TQK{I|L}ENV;{[QN]|[E{I|L}]|[KN]}SQK{I|L}EGGV;{[QN]|[E{I|L}]|[KN]}S[AG]K{I|L}ENV;{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}K{I|L}EGGV 7.4297;7.3348;6.9461;6.8965;6.8824;6.874;6.6617;6.5598;6.5598;6.4649 -;-;-;-;-;-;-;-;-;- 1643 1 1.616 82967.6 1.0 4722 5292 10011 HBL1_DMSO_200M_050219_1,10016 HBL1_DMSO_200M_050219_1,10016,ELSQIKQDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10017 52.31 104.0 624170.0 25 0 36754.0 9758 FMPSPTFSEL 10 87 578.2738840504194 1154.533215167639 2 578.2739745974541 MULTI CID FTMS 0 0 0 10011 899445.1875 0.5593264587020752 2 -0.1929435729980468 6 Unmodified _FMPSPTFSEL_ ENSG00000198300|ENST00000326441|PEG3;nc|ENSG00000198300|Q9GZU2-2|PEG3;nc|ENSG00000198300|Q9GZU2-4|PEG3;PEG3|p.Y1315*|1|0.21|ENSG00000198300|chr19:56814497-56814497|A/-|frameshift_variant 24.020572477871973 0.4289996903560794 3 [DN]ESVG[RH]E{I|L} 10 7 + 48.689 0.0 0.0 4.2172 4.2172 82.665 0.0 0.0 0.0 18.51219677964764 12.92719286378599 12.92719286378599 9.542425094393243 0 0.5 0.0 1.305462187404089 0.0 [DN]ESVG[RH]E{I|L};[DN]EDK[RH]E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TWG[RH]E{I|L};[DN]WW[RH]E{I|L};[VP][RN]SG[PA]E[DN];[VP][RN]S[QP]E[DN] 4.2172;3.3907;3.019;1.7072;0.75704;0.18748 -;-;-;-;-;- 234 + 1 1.616 54646.9 1.0 4723 5292 10011 HBL1_DMSO_200M_050219_1,10017 HBL1_DMSO_200M_050219_1,10017,FMPSPTFSEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10018 52.312 64.0 645450.0 25 0 46139.0 + 45003 YPSQPPVTTV 10 88 544.7843495706926 0 544.7853271365166 PEAK CID FTMS 0 0 0 10011 719074.875 0.3310055456068595 -2 0.1892738342285156 7 Unmodified _YPSQPPVTTV_ ENSG00000074319|ENST00000251968|TSG101;ENST00000543087.5_1_11:18512432-18536353:-|nuORF;ENST00000545247.6_1_11:18505395-18536277:-|nuORF;nc|ENSG00000074319|Q99816-2|TSG101 21.53697664764585 0.2858915239208219 3 T 1 9 8.9794 0.0 0.0 0.82565 0.0 0.0 693.3320830751758 290.1517428033813 983.4838258785572 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 + T 0.82565 + + 83 + 1 1.616 38715.4 1.0 4724 5292 10011 HBL1_DMSO_200M_050219_1,10018 HBL1_DMSO_200M_050219_1,10018,YPSQPPVTTV False True YPSQPPVTTV 52.31155 544.785327136517 20625478.0 10011.0 ENST00000545247.6_1_11:18505395-18536277:-|nuORF;;ENSG00000074319|ENST00000251968|TSG101;;nc|ENSG00000074319|Q99816-2|TSG101;;ENST00000543087.5_1_11:18512432-18536353:-|nuORF 3.278643767038981 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10019 52.314 94.0 818290.0 25 0 70208.0 + 21030 LPAADVKNI 9 100 470.7767416243672 939.5389303155343 2 470.7767211794853 MULTI CID FTMS 0 0 0 10011 625364.625 0.0350703912212959 -4 0.460601806640625 8 Unmodified _LPAADVKNI_ ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF 60.07390631473393 0.0260411565414776 3 {I|L}PAADVKQV 9 2 + 78.006 0.0 0.0 8.3026 8.3026 82.655 0.0 0.0 0.0 28.47923917161624 0.6214790674884512 0.6214790674884512 0.6214790674884512 0 1.5451140161145327 2.0 0.0 0.6861818737241735 {I|L}PAADVKQV;{I|L}PAADVKN{I|L};{I|L}PAADVK{I|L}N;{I|L}PAADVK[AG]V;{I|L}PAADVKGG{I|L} 8.3026;8.2365;7.9161;6.9974;6.9313 -;+;-;-;- + 922 + 1 1.616 64746.0 1.0 4725 5292 10011 HBL1_DMSO_200M_050219_1,10019 HBL1_DMSO_200M_050219_1,10019,LPAADVKNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10020 52.315 56.0 1085800.0 25 0 82738.0 + 35054 SQTFVNPHV 9 104 514.761779757879 0 514.7617065310478 PEAK CID FTMS 0 0 0 10011 588283.1875 0.3158869556316627 -2 0.1892738342285156 9 Unmodified _SQTFVNPHV_ ENSG00000105053|ENST00000316763|VRK3;ENST00000424804.6_1_19:50496160-50519419:-|nuORF;ENST00000599138.5_1_19:50512054-50519419:-|nuORF;ENST00000602029.1_1_19:50519188-50519419:-|nuORF;nc|ENSG00000105053|Q8IV63-2|VRK3;nc|ENSG00000105053|Q8IV63-3|VRK3 34.40172386719151 0.0892392376003579 3 T{M(Oxidation (M))|F}VNP 5 4 31.938 0.0 0.0 3.1083 0.0 0.0 215.09070971088312 251.1155184381469 466.2062281490301 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + T{M(Oxidation (M))|F}VNP 3.1083 + + 104 + 1 1.616 49777.8 1.0 4726 5292 10011 HBL1_DMSO_200M_050219_1,10020 HBL1_DMSO_200M_050219_1,10020,SQTFVNPHV True True SQTFVNPHV 52.315039 514.761706531048 11628653.0 10011.0 ENST00000599138.5_1_19:50512054-50519419:-|nuORF;;nc|ENSG00000105053|Q8IV63-2|VRK3;;ENST00000424804.6_1_19:50496160-50519419:-|nuORF;;ENSG00000105053|ENST00000316763|VRK3;;nc|ENSG00000105053|Q8IV63-3|VRK3;;ENST00000602029.1_1_19:50519188-50519419:-|nuORF 8.095161120096842 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10021 52.317 76.0 841730.0 25 0 54544.0 + 21254 LPDTMSLTV 9 100 488.7531214727471 975.4916900122944 2 488.7538329958916 MULTI CID FTMS 0 0 0 10011 586296.3125 0.1298772101056757 -6 0.6700210571289062 10 Unmodified _LPDTMSLTV_ REV__ENSG00000134376|ENST00000367400|CRB1;REV__nc|ENSG00000134376|P82279-2|CRB1;REV__nc|ENSG00000134376|P82279-3|CRB1;REV__nc|ENSG00000134376|P82279-4|CRB1 30.22481116460888 0.1466181017706357 3 [EP]YAP{I|L}{[WT]|[RM]} 8 -1 + 28.382 0.0 0.0 2.9095 2.9095 69.647 0.0 0.0 0.0 3.944794765625304 -0.6484542269219773 -0.6484542269219773 1.7609125905568137 0 0.0 0.8538719643217619 0.0 0.0 [EP]YAP{I|L}{[WT]|[RM]};[EP]PYA{I|L}{[WT]|[RM]};[EP]{M(Oxidation (M))|F}SP{I|L}{[WT]|[RM]};[EP]YPA{I|L}{[WT]|[RM]};[{I|L}P]Y[EP]A{[WT]|[RM]};[EP]PY{I|L}A{[WT]|[RM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EAP{I|L}{[WT]|[RM]};[EP]YP{I|L}A{[WT]|[RM]};{[HG]|PP}EYA{I|L}{[WT]|[RM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EPA{I|L}{[WT]|[RM]} 2.9095;2.729;2.5015;2.4204;2.3428;2.2399;2.0866;1.9313;1.6262;1.5975 -;-;-;-;-;-;-;-;-;- 866 1 1.616 55503.4 1.0 4727 5292 10011 HBL1_DMSO_200M_050219_1,10021 HBL1_DMSO_200M_050219_1,10021,LPDTMSLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10022 52.32 170.0 551710.0 25 0 102790.0 -1 MGMYFRPLTSY 11 96 699.3138783255497 1396.6132037178993 2 699.3146240115166 MULTI CID FTMS 0 0 0 10011 480660.0625 0.4789926889497659 -2 0.1892738342285156 11 2 Oxidation (M) _M(Oxidation (M))GM(Oxidation (M))YFRPLTSY_ ENSG00000172150|ENST00000381951|OR1A2 8.155526934196011 0.8366696279279818 3 [TP]TTMT{I|L}S 8 -1 34.139 0.0 0.0 2.4444 0.0 0.0 0.0 561.1881298255743 561.1881298255743 2.83814083054029 0.0 0.0 0.0 0 0.0 0.0 2.805462187404089 0.0 [TP]TTMT{I|L}S 2.4444 - 567 1 1.616 71779.7 1.0 4728 5292 10011 HBL1_DMSO_200M_050219_1,10022 HBL1_DMSO_200M_050219_1,10022,MGMYFRPLTSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10023 52.324 185.0 682660.0 25 0 58701.0 + 2854 AVDEDRKMYL 10 135 413.8733983945045 1238.5983657837137 3 413.8725768923759 MULTI CID FTMS 0 0 0 10011 419819.375 0.7886678377317548 -1 0.1193313598632812 12 Unmodified _AVDEDRKMYL_ ENSG00000108094|ENST00000374749|CUL2;nc|ENSG00000108094|Q13617-2|CUL2 29.84058131909904 0.2982332456971691 3 AVD[NP]VYWY{I|L} 10 5 + 55.315 0.0 0.0 4.4659 4.4659 71.378 0.0 0.0 0.0 13.747526427636664 3.495071589193124 3.495071589193124 0.5031220908418277 0 0.6421590589602533 2.0 0.0 0.0 AVD[NP]VYWY{I|L};AV{I|L}[QA][{M(Oxidation (M))|F}E]WY{I|L};AVYYVYWY{I|L};AVDED[KT]WY{I|L};AVD[NP]VN[WP]EV;AVYYVN[WP]EV;AVD[NP]VYW{I|L}Y;AV{I|L}[QA][{M(Oxidation (M))|F}E]W{I|L}Y;AVD[NP]VN[WP]D{I|L};AVYYVYW{I|L}Y 4.4659;4.4253;4.3557;4.3238;4.1837;4.07;4.0488;4.0082;3.9875;3.9386 -;-;-;-;-;-;-;-;-;- 1977 + 1 1.616 101559.7 1.0 4729 5292 10011 HBL1_DMSO_200M_050219_1,10023 HBL1_DMSO_200M_050219_1,10023,AVDEDRKMYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10024 52.333 545.0 452720.0 25 0 55063.0 + -1 FSQHMRGHSQL 11 128 672.3144265477721 1342.614300162344 2 672.3143188357353 MULTI CID FTMS 0 0 0 10011 417752.5 0.5869943417386134 -2 0.1892738342285156 13 Oxidation (M) _FSQHM(Oxidation (M))RGHSQL_ REV__ENSG00000163637|ENST00000638394|PRICKLE2 17.11289562659939 0.6791789249425932 3 [PS]TASQ{I|L}C{I|L} 9 -1 46.314 0.0 0.0 3.4495 0.0 0.0 0.0 439.1614847096265 439.1614847096265 15.568109453757652 0.0 0.0 0.0 0 0.0 0.0 2.6549471895720984 0.0 [PS]TASQ{I|L}C{I|L} 3.4495 - 3186 1 1.616 179838.3 1.0 4730 5292 10011 HBL1_DMSO_200M_050219_1,10024 HBL1_DMSO_200M_050219_1,10024,FSQHMRGHSQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10025 52.337 174.0 513290.0 25 0 47343.0 + 1663 ALNHTLSV 8 116 427.7403244458358 853.4660959584717 2 427.7402526736259 MULTI CID FTMS 0 0 0 10011 403049.15625 1.0 0 0.0 14 Unmodified _ALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 50.855029805455786 0.1352255786796883 3 [{I|L}A]NHT{I|L}SV 8 0 + 25.226 0.0 0.0 2.9557 2.9557 75.024 0.0 0.0 0.0 4.424131975308086 5.850266520291815 4.424131975308086 5.511525224473807 0 0.8979400086720375 1.5228787452803376 0.805462187404089 0.0 + + [{I|L}A]NHT{I|L}SV;[{I|L}A]{[HG]|PP}GT{I|L}SV;[HN][{I|L}T]A{I|L}SV;{[TV]|[{I|L}S]}[HQ]A{I|L}SV;[{I|L}T][HN]A{I|L}SV;[HT]{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}SV;[HN][{I|L}A]T{I|L}SV;[{I|L}A]{[HG]|PP}[RD]SV 2.9557;2.3099;2.1754;2.0578;1.9077;1.6607;1.538;0.32703 +;-;-;-;-;-;-;- + 250 1 1.616 73881.6 1.0 4731 5292 10011 HBL1_DMSO_200M_050219_1,10025 HBL1_DMSO_200M_050219_1,10025,ALNHTLSV False True ALNHTLSV 52.336637 427.740252673626 2859486.0 10011.0 ENSG00000110777|ENST00000393067|POU2AF1 1.5439862807591755 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10026 52.339 125.0 840040.0 25 0 118420.0 -1 VTSGMMYALY 10 138 584.2550530597651 1166.4955531863302 2 584.2543823122978 MULTI CID FTMS 0 0 0 10011 364400.75 0.8881802906002814 -2 0.1892738342285156 15 2 Oxidation (M) _VTSGM(Oxidation (M))M(Oxidation (M))YALY_ ENSG00000156162|ENST00000414645|DPY19L4 14.838274106304384 0.5985701837916485 3 {[TV]|[{I|L}S]}S[YC(Carbamidomethyl (C))]SNHTV 10 -1 + 61.014 0.0 0.0 5.2305 5.2305 84.433 0.0 0.0 0.0 36.59765299137285 2.435012637084178 2.435012637084178 9.16453948549924 0 0.9247425010840048 2.0 1.6237125054200234 0.0 {[TV]|[{I|L}S]}S[YC(Carbamidomethyl (C))]SNHTV;{[TV]|[{I|L}S]}S[YC(Carbamidomethyl (C))]SGGHTV;{[TV]|[{I|L}S]}S[HN]S{I|L}S[YC(Carbamidomethyl (C))];{[TV]|[{I|L}S]}S[YC(Carbamidomethyl (C))]S{[HG]|PP}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}H[NS]S{I|L}S[YC(Carbamidomethyl (C))];{[TV]|[{I|L}S]}S[YC(Carbamidomethyl (C))]{I|L}NH{[CA]|SS};{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]D{I|L}S[YC(Carbamidomethyl (C))];{[TV]|[{I|L}S]}H[C(Carbamidomethyl (C))Q]{I|L}S[YC(Carbamidomethyl (C))];{[TV]|[{I|L}S]}HA{[C(Carbamidomethyl (C))G]|[NC]}{I|L}S[YC(Carbamidomethyl (C))];{[TV]|[{I|L}S]}SPWW{[MS]|[{M(Oxidation (M))|F}A]}{[CA]|SS} 5.2305;4.4449;4.3131;3.1597;2.896;2.8415;2.0885;2.0885;2.0492;2.0341 -;-;-;-;-;-;-;-;-;- 2081 + 1 1.616 84397.3 1.0 4732 5292 10011 HBL1_DMSO_200M_050219_1,10026 HBL1_DMSO_200M_050219_1,10026,VTSGMMYALY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10027 52.344 237.0 626340.0 25 0 86573.0 + 12892 GVYNGKTFNQV 11 141 613.8113429676246 1225.608133002049 2 613.8112670779228 MULTI CID FTMS 0 0 0 10011 359494.09375 0.2848050118187109 -2 0.1892738342285156 16 Unmodified _GVYNGKTFNQV_ ENSG00000115268|ENST00000592588|RPS15;ENST00000522454.1_1_5:164028010-164028223:-|nuORF 81.9152076656658 0.0062322988290358 3 [VG]YN[KT]TKGC(Carbamidomethyl (C))V 11 4 + 67.261 0.0 0.0 5.488 5.488 78.586 0.0 0.0 0.0 13.427452887483987 12.060323256818208 12.060323256818208 2.9091897107331164 0 0.6747425010840047 1.6989700043360187 0.25 1.555462187404089 [VG]YN[KT]TKGC(Carbamidomethyl (C))V;[VG]Y[KC]GKGRC(Carbamidomethyl (C))V;RY[KC]GKMNQV;[VG]Y[VP]{M(Oxidation (M))|F}TKGC(Carbamidomethyl (C))V;[VG]Y[KC]GRKGC(Carbamidomethyl (C))V;[VG]YGG[KT]TKGC(Carbamidomethyl (C))V;[VG]YN[KT]TKG[CG]V;[VG]Y[KC]GKG{[MG]|[TS]}QV;[VG]Y[KC]GKGR[CG]V;[VG]Y[C(Carbamidomethyl (C))K]KGRC(Carbamidomethyl (C))V 5.488;5.2506;4.9659;4.9326;4.8207;4.7431;4.7431;4.6541;4.5058;4.4785 -;-;-;-;-;-;-;-;-;- 22803 + 1 1.616 115275.9 1.0 4733 5292 10011 HBL1_DMSO_200M_050219_1,10027 HBL1_DMSO_200M_050219_1,10027,GVYNGKTFNQV True True GVYNGKTFNQV 52.343687 613.811267077923 15537001.0 10011.0 ENSG00000115268|ENST00000592588|RPS15;;ENST00000522454.1_1_5:164028010-164028223:-|nuORF 7.682923793792725 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10028 52.356 692.0 302070.0 25 0 18351.0 + 10255 FQTEVGKQL 9 202 525.2840557895161 1048.553558645832 2 525.7834960818291 MULTI CID FTMS 0 0 0 10011 289089.90625 0.9121908717972688 -1 0.1193313598632812 17 Unmodified _FQTEVGKQL_ ENSG00000160255|ENST00000652462|ITGB2;ENST00000498666.5_1_21:46314678-46340855:-|nuORF 41.8396318013385 0.0653578398400075 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T[WR]{I|L}T 7 6 40.634 0.0 0.0 3.8753 0.0 0.0 0.0 113.0602030959167 113.0602030959167 18.978655496795017 0.0 0.0 0.0 0 0.4247425010840047 0.6020599913279624 1.4604093769761877 0.7302046884880937 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T[WR]{I|L}T 3.8753 - 5413 1 1.616 161013.5 1.0 4734 5292 10011 HBL1_DMSO_200M_050219_1,10028 HBL1_DMSO_200M_050219_1,10028,FQTEVGKQL True True FQTEVGKQL 52.355714 525.783496081829 2083463.5 10011.0 ENST00000498666.5_1_21:46314678-46340855:-|nuORF;;ENSG00000160255|ENST00000652462|ITGB2 1.820257435242335 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10029 52.368 696.0 310850.0 25 0 26060.0 + 2855 AVDEDRKMYL 10 167 620.3059057929486 1238.597258652697 2 620.3068115115166 MULTI CID FTMS 0 0 0 10011 263572.84375 0.7809651068409822 -1 0.1193313598632812 18 Unmodified _AVDEDRKMYL_ ENSG00000108094|ENST00000374749|CUL2;nc|ENSG00000108094|Q13617-2|CUL2 70.92866715596459 0.0189067049654103 3 {I|L}GDEDRKMY{I|L} 10 2 + 107.29 0.0 0.0 8.6621 8.6621 93.547 0.0 0.0 0.0 74.1418867139339 10.962408376219258 10.962408376219258 9.164539485499262 0 2.497425010840047 2.0 0.9604093769761876 0.6505149978319906 {I|L}GDEDRKMY{I|L};{I|L}GDED[VG]KMY{I|L};AVDEDRKMY{I|L};AVDED[VG]KMY{I|L};{I|L}GDE[{I|L}T][HN]NN{I|L};{I|L}GDE{[QV]|[N{I|L}]|[RA]|[KV]}R{M(Oxidation (M))|F}Y{I|L};{I|L}GDE[{I|L}T][C(Carbamidomethyl (C))R]Y{I|L};{I|L}GDE[{I|L}T][HN]NQV;{I|L}GD[VG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KMY{I|L};{I|L}GD[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PMY{I|L} 8.6621;7.9222;7.8743;7.1344;6.5401;6.4895;6.4449;6.1639;6.1056;5.9336 -;-;+;-;-;-;-;-;-;- + 12258 + 1 1.616 159099.3 1.0 4735 5292 10011 HBL1_DMSO_200M_050219_1,10029 HBL1_DMSO_200M_050219_1,10029,AVDEDRKMYL True True AVDEDRKMYL 52.367818 620.306811511517 6347271.5 10011.0 ENSG00000108094|ENST00000374749|CUL2;;nc|ENSG00000108094|Q13617-2|CUL2 6.913674354553223 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10030 52.376 417.0 444720.0 25 0 50055.0 + 31430 RPPFCLLIE 9 204 363.20508595728666 1086.59342847206 3 363.2046386599541 MULTI CID FTMS 0 0 0 10011 260384.3125 1.0 0 0.0 19 Unmodified _RPPFCLLIE_ REV__ENST00000436513.5_1_19:54872785-54876477:-|nuORF 16.942295170755138 0.3780752226737986 3 {M(Oxidation (M))|F}PRVGE{I|L}NR 9 -1 + 29.127 0.0 0.0 2.6806 2.6806 72.094 0.0 0.0 0.0 18.642164520410567 1.2071518833263966 1.2071518833263966 3.4678748622465605 0 0.0 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}PRVGE{I|L}NR;{M(Oxidation (M))|F}PRRE{I|L}NR;{M(Oxidation (M))|F}PR{I|L}{[RE]|[WV]}NR;{M(Oxidation (M))|F}PRVGE[RN]{I|L};{M(Oxidation (M))|F}PRVGE{I|L}GGR;{M(Oxidation (M))|F}P[VG]VGE{I|L}NR;{M(Oxidation (M))|F}PR{I|L}[DG]{I|L}NR;{M(Oxidation (M))|F}PRVGE{I|L}AQA;{M(Oxidation (M))|F}PRV[HS][{M(Oxidation (M))|F}V]V;{M(Oxidation (M))|F}{I|L}[RP]{[RE]|[WV]}NR 2.6806;2.3614;1.9481;1.9093;1.8331;1.8331;1.7132;1.6494;1.6159;1.6065 -;-;-;-;-;-;-;-;-;- 530 + 1 1.616 152725.2 1.0 4736 5292 10011 HBL1_DMSO_200M_050219_1,10030 HBL1_DMSO_200M_050219_1,10030,RPPFCLLIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10031 52.39 783.0 202840.0 25 0 14054.0 + -1 CHKNRWHHCHC 11 100 837.3405253775146 1672.6664978218291 2 837.8439208865166 MULTI CID FTMS 0 0 0 10011 245745.96875 0.4718433483186854 -1 0.1193313598632812 20 Acetyl (Protein N-term),3 Carbamidomethyl (C) _(Acetyl (Protein N-term))C(Carbamidomethyl (C))HKNRWHHC(Carbamidomethyl (C))HC(Carbamidomethyl (C))_ REV__ENST00000354725.7_1_7:127484450-127527966:+|nuORF 0.0 0.8751479354844584 3 [VG]SDCV{M(Oxidation (M))|F}V 8 -1 34.022 0.0 0.0 2.034 0.0 0.0 0.0 863.2987582698619 863.2987582698619 10.928319376073798 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.8209991640913001 0.0 [VG]SDCV{M(Oxidation (M))|F}V 2.034 - 2609 1 1.616 111786.3 1.0 4737 5292 10011 HBL1_DMSO_200M_050219_1,10031 HBL1_DMSO_200M_050219_1,10031,CHKNRWHHCHC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10033 52.394 41.0 942820.0 25 0 159710.0 -1 MAVVLPAVV 9 61 478.7797682178253 0 478.7798339724541 PEAK CID FTMS 0 0 0 10032 360700.90625 0.2317839673787537 2 -0.2312049865722656 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))AVVLPAVV_ ENSG00000214941|ENST00000399277|ZSWIM7 9.347437153973935 0.3197567915069932 3 C{I|L} 2 -1 11.454 0.0 0.0 1.1987 0.0 0.0 113.13751949922592 623.2913302057249 736.4288497049508 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 C{I|L} 1.1987 - 5 + 1 1.603 37603.2 1.0 4738 5293 10032 HBL1_DMSO_200M_050219_1,10033 HBL1_DMSO_200M_050219_1,10033,MAVVLPAVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10034 52.396 94.0 803380.0 25 0 54671.0 + 975 AFQERLNSY 9 114 564.2776048497224 1126.5406567662446 2 564.2775756716728 MULTI CID FTMS 0 0 0 10032 182242.59375 0.0341678714182155 3 -0.3113250732421875 2 Unmodified _AFQERLNSY_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 41.95555342248728 0.0647214845423414 3 [H{I|L}]MNREQ 7 8 23.918 0.0 0.0 2.1231 0.0 0.0 0.0 215.08299062749668 215.08299062749668 7.107500652149103 0.0 0.0 0.0 0 0.6677353201839438 0.744727494896694 0.0 0.3807196863200844 [H{I|L}]MNREQ 2.1231 - 301 1 1.603 66820.9 1.0 4739 5293 10032 HBL1_DMSO_200M_050219_1,10034 HBL1_DMSO_200M_050219_1,10034,AFQERLNSY True True AFQERLNSY 52.396495 564.277575671673 28618866.0 10032.0 nc|ENSG00000113569|O75694-2|NUP155;;ENSG00000113569|ENST00000231498|NUP155 5.11897087097168 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10035 52.398 20.0 1294100.0 25 0 76824.0 + 15453 IPQEFQKTV 9 62 545.3022944537452 1088.5900359742902 2 545.3041259646416 MULTI CID FTMS 0 0 0 10032 1444644.5 0.4100083980166036 -1 0.091827392578125 3 Unmodified _IPQEFQKTV_ ENSG00000116521|ENST00000302631|SCAMP3;ENST00000462151.5_1_1:155228611-155230144:-|nuORF;ENST00000472397.5_1_1:155226487-155230214:-|nuORF;ENST00000490999.5_1_1:155226066-155230310:-|nuORF;nc|ENSG00000116521|O14828-2|SCAMP3 34.93206674587334 0.1032771302489716 3 {I|L}PQ 3 6 36.273 0.0 0.0 3.3321 0.0 0.0 0.0 747.3654268854124 747.3654268854124 16.307649159064397 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.3252574989159953 + {I|L}PQ 3.3321 + + 93 + 1 1.603 29616.8 1.0 4740 5293 10032 HBL1_DMSO_200M_050219_1,10035 HBL1_DMSO_200M_050219_1,10035,IPQEFQKTV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10036 52.4 85.0 411390.0 25 0 36830.0 + 15853 ISNEFKVEV 9 71 532.7849061537099 1063.5552593742198 2 532.7849609255791 MULTI CID FTMS 0 0 0 10032 600370.0625 0.009914823759018 6 -0.6752700805664062 4 Unmodified _ISNEFKVEV_ ENSG00000171603|ENST00000377298|CLSTN1;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;nc|ENSG00000171603|O94985-2|CLSTN1 18.1463463914782 0.3454829746528889 3 QWVEV 5 6 42.691 0.0 0.0 4.014 0.0 0.0 404.2433338849625 0.0 404.2433338849625 0.0 25.587906747393205 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 QWVEV 4.014 - 87 1 1.603 35130.6 1.0 4741 5293 10032 HBL1_DMSO_200M_050219_1,10036 HBL1_DMSO_200M_050219_1,10036,ISNEFKVEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10037 52.401 79.0 582440.0 25 0 54645.0 -1 QRERHYNMLQ 10 68 695.838729248529 1389.662905563858 2 695.8380615115166 MULTI CID FTMS 0 0 0 10032 597892.0 0.6295525519614519 -1 0.091827392578125 5 Oxidation (M) _QRERHYNM(Oxidation (M))LQ_ ENSG00000198691|ENST00000370225|ABCA4 16.149105407346934 0.5765757077271437 3 {[QV]|[N{I|L}]|[RA]|[KV]}NADP{[QS]|[NT]}SG{M(Oxidation (M))|F}{I|L}Q 13 -1 + 85.966 0.0 0.0 6.1861 6.1861 89.764 0.0 0.0 0.0 26.00843075963717 74.7119541930633 26.00843075963717 11.642078980768076 0 2.8182503180159344 2.0 0.0 0.6861818737241735 {[QV]|[N{I|L}]|[RA]|[KV]}NADP{[QS]|[NT]}SG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NWP{[QS]|[NT]}SG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NADP{[QS]|[NT]}SGR[MT];{[QV]|[N{I|L}]|[RA]|[KV]}NWP{[QS]|[NT]}SGR[MT] 6.1861;5.3484;4.1141;3.2763 -;-;-;- 130 1 1.603 41010.1 1.0 4742 5293 10032 HBL1_DMSO_200M_050219_1,10037 HBL1_DMSO_200M_050219_1,10037,QRERHYNMLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10038 52.403 89.0 860510.0 25 0 46953.0 + 15632 IQHSEFEEV 9 127 559.2617243447005 0 559.2617065310478 PEAK CID FTMS 0 0 0 10032 525347.8125 1.0 0 0.0 6 Unmodified _IQHSEFEEV_ ENSG00000108175|ENST00000334512|ZMIZ1;nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1 34.93206674587334 0.0866320009191956 3 EE{M(Oxidation (M))|F}ESH 6 6 39.346 0.0 0.0 3.524 0.0 0.0 117.07958775014464 238.12055383853752 355.2001415886822 0.0 0.0 0.0 0.0 0 0.7302046884880938 0.0 0.805462187404089 0.0 EE{M(Oxidation (M))|F}ESH 3.524 - 301 + 1 1.603 63945.1 1.0 4743 5293 10032 HBL1_DMSO_200M_050219_1,10038 HBL1_DMSO_200M_050219_1,10038,IQHSEFEEV True True IQHSEFEEV 52.403378 559.261706531048 3880245.75 10032.0 ENSG00000108175|ENST00000334512|ZMIZ1;;nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1 6.338992595672607 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10039 52.407 201.0 422860.0 25 0 40738.0 + 3690 DAFGKGKQLTV 11 122 582.3248639625627 1162.6351749919254 2 582.3249999880791 MULTI CID FTMS 0 0 0 10032 429205.78125 0.4171163165587881 -1 0.091827392578125 7 Unmodified _DAFGKGKQLTV_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 63.16350221638945 0.0563062883723567 3 DA{M(Oxidation (M))|F}GK 5 6 56.956 0.0 0.0 4.8988 0.0 0.0 0.0 641.3665865533811 641.3665865533811 32.72034022175138 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.0 0.0 + DA{M(Oxidation (M))|F}GK 4.8988 + + 549 + 1 1.603 65736.8 1.0 4744 5293 10032 HBL1_DMSO_200M_050219_1,10039 HBL1_DMSO_200M_050219_1,10039,DAFGKGKQLTV True True DAFGKGKQLTV 52.407226 582.324999988079 5210241.0 10032.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 6.702612400054932 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10040 52.409 95.0 493640.0 25 0 90735.0 24840 MPKTQKYQ 8 67 512.268184858621 1022.521816784042 2 512.2690307497978 MULTI CID FTMS 0 0 0 10032 412750.53125 0.5495203851497217 -3 0.2811012268066406 8 Unmodified _MPKTQKYQ_ nc|ENSG00000017427|P05019-4|IGF1;nc|ENSG00000017427|P05019|IGF1 11.640296217721598 0.738950129755968 3 MP 2 6 44.776 0.0 0.0 4.379 0.0 0.0 0.0 791.405400582722 791.405400582722 32.76970248781723 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + MP 4.379 + + 54 + 1 1.603 45610.8 1.0 4745 5293 10032 HBL1_DMSO_200M_050219_1,10040 HBL1_DMSO_200M_050219_1,10040,MPKTQKYQ False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10041 52.412 122.0 739160.0 25 0 62184.0 + 16506 KALSDHHIYL 10 93 399.5524408165359 1195.6354930498076 3 399.5523864626884 MULTI CID FTMS 0 0 0 10032 341584.46875 0.4549866871881741 -1 0.091827392578125 9 Unmodified _KALSDHHIYL_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 22.774965066869 0.4569865297271528 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HK]EH{I|L}Y{I|L} 9 5 + 41.035 0.0 0.0 3.432 3.432 82.998 0.0 0.0 0.0 5.509074688805811 27.935684192257995 5.509074688805811 22.72878745280337 0 0.5796896906561032 0.0 0.7059771852360797 0.805462187404089 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HK]EH{I|L}Y{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}K{I|L}Y{I|L} 3.432;1.5311 -;- 120 1 1.603 72281.0 1.0 4746 5293 10032 HBL1_DMSO_200M_050219_1,10041 HBL1_DMSO_200M_050219_1,10041,KALSDHHIYL False True KALSDHHIYL 52.411832 399.552386462688 4099563.5 10032.0 nc|ENSG00000149925|P04075|ALDOA;;ENSG00000149925|ENST00000642816|ALDOA 5.246937115987142 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10042 52.422 557.0 248550.0 25 0 68468.0 -1 QYLFAFECKIE 11 99 724.3516330882944 0 724.3523437380791 PEAK CID FTMS 0 0 0 10032 335571.59375 0.9580108565079052 -1 0.091827392578125 10 Carbamidomethyl (C) _QYLFAFEC(Carbamidomethyl (C))KIE_ ENSG00000049618|ENST00000636930|ARID1B;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B 9.38312468134398 0.4559597037863106 3 VSYQ 4 -1 29.003 0.0 0.0 2.0048 0.0 0.0 741.35449801077 225.0887392633422 966.4432372741122 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 1.360924374808178 VSYQ 2.0048 - 260 + 1 1.603 100237.0 1.0 4747 5293 10032 HBL1_DMSO_200M_050219_1,10042 HBL1_DMSO_200M_050219_1,10042,QYLFAFECKIE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10043 52.426 211.0 409650.0 25 0 45131.0 + 39057 TVVKAISGV 9 119 437.2738321247976 872.5331113163952 2 437.2740661501884 MULTI CID FTMS 0 0 0 10032 324892.09375 0.3033338888521266 -1 0.091827392578125 11 Unmodified _TVVKAISGV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 41.8396318013385 0.0653578398400075 3 {[TV]|[{I|L}S]}VVTKQV 8 5 + 63.963 0.0 0.0 7.3307 7.3307 87.625 0.0 0.0 0.0 26.989700043360187 10.543576623225924 10.543576623225924 5.225380570416149 0 0.4247425010840047 2.0 0.6549471895720985 0.6747425010840047 {[TV]|[{I|L}S]}VVTKQV;{[TV]|[{I|L}S]}VVTKAGV;{[TV]|[{I|L}S]}VV[KQ]TV;{[TV]|[{I|L}S]}V[KA]{I|L}SGV;{[TV]|[{I|L}S]}VVTKN{I|L};{[TV]|[{I|L}S]}V[KA]GVTV;{[TV]|[{I|L}S]}VV[KQ]S{I|L};{[TV]|[{I|L}S]}V[KA]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}V[KA]GVS{I|L};{[TV]|[{I|L}S]}VVTKGG{I|L} 7.3307;6.7319;6.4338;6.1507;6.1224;5.9388;5.2254;5.1196;4.7304;4.6881 -;-;-;+;-;-;-;-;-;- + 447 + 1 1.603 70439.1 1.0 4748 5293 10032 HBL1_DMSO_200M_050219_1,10043 HBL1_DMSO_200M_050219_1,10043,TVVKAISGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10044 52.428 115.0 293550.0 25 0 25904.0 43903 YFVTGNHEY 9 62 565.2516135004404 1128.488674067681 2 565.2509643435478 MULTI CID FTMS 0 0 0 10032 333293.59375 0.7622927573219921 1 -0.1011161804199218 12 Unmodified _YFVTGNHEY_ ENSG00000188167|ENST00000342462|TMPPE;nc|ENSG00000188167|Q6ZT21-2|TMPPE 10.073929032068715 0.563993802247229 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F} 3 8 19.922 0.0 0.0 1.7653 0.0 0.0 0.0 744.28927766559 744.28927766559 5.216525140920611 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F} 1.7653 - 31 1 1.603 30312.1 1.0 4749 5293 10032 HBL1_DMSO_200M_050219_1,10044 HBL1_DMSO_200M_050219_1,10044,YFVTGNHEY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10045 52.43 96.0 256810.0 25 0 49114.0 + 4582 DAYSIQGQHTI 11 46 616.7983095946776 1231.582066256155 2 616.7970458865166 MULTI CID FTMS 0 0 0 10032 287692.40625 0.6335252020849684 -1 0.091827392578125 13 Unmodified _DAYSIQGQHTI_ ENSG00000169564|ENST00000303577|PCBP1 53.40400417844725 0.0987786977674846 3 [WY]S{I|L}Q 5 7 30.942 0.0 0.0 2.5124 0.0 0.0 0.0 551.2586749645853 551.2586749645853 24.91135616519784 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.9247425010840048 [WY]S{I|L}Q 2.5124 - 65 + 1 1.603 23246.6 1.0 4750 5293 10032 HBL1_DMSO_200M_050219_1,10045 HBL1_DMSO_200M_050219_1,10045,DAYSIQGQHTI True True DAYSIQGQHTI 52.430114 616.797045886517 2449113.25 10032.0 ENSG00000169564|ENST00000303577|PCBP1 7.004703839619954 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10046 52.432 59.0 769360.0 25 0 89480.0 + 36988 TFIPVTSAK 9 80 482.2789920391311 962.5434311450622 2 482.2790405154228 MULTI CID FTMS 0 0 0 10032 238227.9375 0.4627321363785271 -1 0.091827392578125 14 Unmodified _TFLKINDL_ nc|ENSG00000026508|P16070-5|CD44;nc|ENSG00000026508|P16070-10|CD44;nc|ENSG00000026508|P16070-3|CD44;nc|ENSG00000026508|P16070-17|CD44;nc|ENSG00000026508|P16070-7|CD44;nc|ENSG00000026508|P16070-11|CD44;nc|ENSG00000026508|P16070-6|CD44;nc|ENSG00000026508|P16070-4|CD44;nc|ENSG00000026508|P16070-16|CD44;ENSG00000026508|ENST00000428726|CD44;nc|ENSG00000026508|P16070-9|CD44 16.942295170755138 0.6606234159769251 3 T[VP]{I|L}ET 6 6 19.864 0.0 0.0 2.0637 0.0 0.0 304.17527968574376 0.0 304.17527968574376 0.0 7.3894654518490945 0.0 0.0 0 0.6435078169319297 0.0 0.4247425010840047 0.0 T[VP]{I|L}ET 2.0637 - 48 1 1.603 43754.8 1.0 4751 5293 10032 HBL1_DMSO_200M_050219_1,10046 HBL1_DMSO_200M_050219_1,10046,TFLKINDL False False TFIPVTSAK 52.43158 482.279040515423 3834389.5 10032.0 nc|ENSG00000026508|P16070-5|CD44;;nc|ENSG00000026508|P16070-10|CD44;;nc|ENSG00000026508|P16070-3|CD44;;nc|ENSG00000026508|P16070-17|CD44;;nc|ENSG00000026508|P16070-7|CD44;;nc|ENSG00000026508|P16070-11|CD44;;nc|ENSG00000026508|P16070-6|CD44;;nc|ENSG00000026508|P16070-4|CD44;;nc|ENSG00000026508|P16070-16|CD44;;ENSG00000026508|ENST00000428726|CD44;;nc|ENSG00000026508|P16070-9|CD44 6.362793445587158 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10047 52.444 739.0 59882.0 25 0 4173.0 + -1 CCRRGMWRWCC 11 77 844.3380004763603 0 844.3380004763603 PEAK CID FTMS 0 0 0 -1 0 15 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))RRGMWRWC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ REV__ENST00000574539.5_1_17:7534071-7534581:+|nuORF 0.0 0.4761840153648598 3 TN{I|L}GD 5 -1 12.064 0.0 0.0 0.71523 0.0 0.0 959.305809447058 224.10486780338127 1183.4106772504394 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6643943297944485 0.6747425010840047 TN{I|L}GD 0.71523 - 299 + 1 1.603 36153.2 1.0 4752 5293 10032 HBL1_DMSO_200M_050219_1,10047 HBL1_DMSO_200M_050219_1,10047,CCRRGMWRWCC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10048 52.458 800.0 289810.0 25 0 24869.0 + 22071 LPPPSPAHL 9 192 464.7661320370119 927.5177111408238 2 464.7671081423759 MULTI CID FTMS 0 0 0 10032 184452.78125 0.7643365656316087 -1 0.091827392578125 16 Unmodified _LPPPSPAHL_ ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3-2|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4 36.04419817259434 0.0971720506436186 3 {I|L}PPPSAPH{I|L} 9 2 + 67.258 0.0 0.0 7.2514 7.2514 84.421 0.0 0.0 0.0 33.515512760207194 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.4247425010840047 2.0 0.2742275032520141 0.0 {I|L}PPPSAPH{I|L};{I|L}PPPSAP{I|L}H;{I|L}PPPS{I|L}HPA;{I|L}PPR[MT]T{I|L};{I|L}PPPS[YR]V;{I|L}PPPS{I|L}[PA]H;{I|L}PPPS{I|L}HAP;{I|L}PPP[YQ]T{I|L};{I|L}PPPS[RV]Y;{I|L}PPP[YR]SV 7.2514;6.9269;6.3857;6.2705;6.2451;6.2035;6.0811;5.5169;5.429;5.1403 -;-;-;-;-;-;-;-;-;- 1484 + 1 1.603 173669.8 1.0 4753 5293 10032 HBL1_DMSO_200M_050219_1,10048 HBL1_DMSO_200M_050219_1,10048,LPPPSPAHL True True LPPPSPAHL 52.458226 464.767108142376 5943260.0 10032.0 nc|ENSG00000134744|Q5TAX3|TUT4;;ENSG00000134744|ENST00000257177|TUT4;;nc|ENSG00000134744|Q5TAX3-2|TUT4 5.766923427581787 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10049 52.462 148.0 334550.0 25 0 24821.0 -1 0 86 474.2507902060384 473.2435137394384 1 474.2519714236259 MULTI CID FTMS 0 0 0 10032 180789.84375 1.0 0 0.0 17 3 [EP]TK 4 -1 + 34.406 0.0 0.0 7.2703 7.2703 84.922 0.0 0.0 0.0 3.1519865284575985 3.1519865284575985 3.1519865284575985 3.1519865284575985 0 0.0 2.0 0.25 0.1271595765414318 [EP]TK;[EP][KT];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP];{[QV]|[N{I|L}]|[RA]|[KV]}{NN|[MP]|[D{I|L}]|[EV]};[KT][EP] 7.2703;6.6043;1.2016;0.73279;0.096689 -;-;-;-;- 43 + 1 1.603 46259.1 1.0 4754 5293 10032 HBL1_DMSO_200M_050219_1,10049 HBL1_DMSO_200M_050219_1,10049, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10050 52.465 126.0 212870.0 25 0 87843.0 + + -1 GQIDADELQRC 11 41 624.2885362015483 1246.5625194698964 2 624.2885009646416 MULTI CID FTMS 0 0 0 10032 171890.3125 1.0 0 0.0 18 2 Carbamidomethyl (C) _NALC(Carbamidomethyl (C))PPPC(Carbamidomethyl (C))RY_ ENSG00000075142|ENST00000265729|SRI;nc|ENSG00000075142|P30626-2|SRI;ENST00000489079.1_1_7:87840172-87856229:-|nuORF;ENST00000488015.5_1_7:87840172-87849341:-|nuORF;ENST00000486860.5_1_7:87838471-87849341:-|nuORF;nc|ENSG00000075142|P30626-3|SRI 6.2057823575117 0.6979311171683138 3 {[QG]|[NA]}{I|L}D 4 -1 16.198 0.0 0.0 1.2994 0.0 0.0 0.0 830.3507174127561 830.3507174127561 12.21848749616356 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QG]|[NA]}{I|L}D 1.2994 - 8 + 1 1.603 29300.5 1.0 4755 5293 10032 HBL1_DMSO_200M_050219_1,10050 HBL1_DMSO_200M_050219_1,10050,NALCPPPCRY False False GQIDADELQRC 52.464951 624.288500964642 1474467.875 10032.0 ENSG00000075142|ENST00000265729|SRI;;nc|ENSG00000075142|P30626-2|SRI;;ENST00000489079.1_1_7:87840172-87856229:-|nuORF;;ENST00000488015.5_1_7:87840172-87849341:-|nuORF;;ENST00000486860.5_1_7:87838471-87849341:-|nuORF;;nc|ENSG00000075142|P30626-3|SRI -0.0243676503499348 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10051 52.477 703.0 147960.0 25 0 30902.0 19341 LENIFDWNVKQ 11 118 703.3587280616186 1404.7029031900372 2 703.3607055544853 MULTI CID FTMS 0 0 0 10032 168871.21875 1.0 0 0.0 19 Unmodified _LENIFDWNVKQ_ ENSG00000129128|ENST00000503362|SPCS3;ENST00000507678.5_1_4:177243228-177249478:+|nuORF;ENST00000513139.1_1_4:177241188-177248429:+|nuORF 20.41453444215458 0.6105011870913812 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 8 18.996 0.0 0.0 1.3523 0.0 0.0 0.0 1061.4681679814469 1061.4681679814469 -6.198339878747486 0.0 -6.198339878747486 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 1.3523 - 214 1 1.603 77678.4 1.0 4756 5293 10032 HBL1_DMSO_200M_050219_1,10051 HBL1_DMSO_200M_050219_1,10051,LENIFDWNVKQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10052 52.491 800.0 124170.0 25 0 29434.0 -1 0 53 1184.507811107608 3550.501603923024 3 1184.841479480267 MULTI CID FTMS 0 0 0 10032 167623.875 0.9137301135884538 -1 0.091827392578125 20 3 E 1 -1 6.9897 0.0 0.0 0.19687 0.0 0.0 2894.2736866035143 524.1620577447874 3418.435744348302 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19687 - 9 + 1 1.603 84914.6 0.75 4757 5293 10032 HBL1_DMSO_200M_050219_1,10052 HBL1_DMSO_200M_050219_1,10052, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10054 52.495 7.8 6404100.0 25 0 1041000.0 + 21269 LPEDKPRLI 9 56 360.88533721187406 1079.6341822358222 3 360.8851501345634 MULTI CID FTMS 0 0 0 10053 10968463.0 1.0 0 0.0 1 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 17.11289562659939 0.3734572693229295 3 {I|L}PEDK{I|L} 6 3 55.667 0.0 0.0 5.1561 0.0 0.0 0.0 381.2254122369751 381.2254122369751 28.21964723176244 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3807196863200844 0.0 {I|L}PEDK{I|L} 5.1561 - 38 + 1 1.587 47778.2 1.0 4758 5294 10053 HBL1_DMSO_200M_050219_1,10054 HBL1_DMSO_200M_050219_1,10054,LPEDKPRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10055 52.496 36.0 1426700.0 25 0 199220.0 + 27157 PFSHGCDS 8 78 425.1639421193535 848.3133313055071 2 425.1638061404228 MULTI CID FTMS 0 0 0 10053 1791259.625 0.6719518939422714 2 -0.2102088928222656 2 Unmodified _PFSHGCDS_ REV__ENSG00000167395|ENST00000300850|ZNF646;REV__nc|ENSG00000167395|O15015-1|ZNF646 2.889219685676258 0.8067950007271085 3 V 1 -1 15.485 0.0 0.0 1.8253 0.0 0.0 731.2337165977907 0.0 731.2337165977907 0.0 -4.69273760456403 -4.69273760456403 0.0 0 0.0 0.0 0.0 0.0 V 1.8253 - 19 + 1 1.587 48258.9 1.0 4759 5294 10053 HBL1_DMSO_200M_050219_1,10055 HBL1_DMSO_200M_050219_1,10055,PFSHGCDS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10056 52.498 11.0 4674600.0 25 0 1160600.0 + 5038 DGYAVDRAI 9 60 490.24563771393485 978.4767224946696 2 490.2458068728447 MULTI CID FTMS 0 0 0 10053 7233461.5 0.3003268425410389 -2 0.1929435729980468 3 Unmodified _DGYAVDRAI_ ENSG00000104824|ENST00000221419|HNRNPL;ENST00000595164.5_1_19:39327364-39331218:-|nuORF;ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;ENST00000601664.1_1_19:39329532-39330816:-|nuORF;nc|ENSG00000104824|P14866-2|HNRNPL 26.268140514670165 0.1969607489560049 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KP]{I|L}A 6 6 37.949 0.0 0.0 3.8784 0.0 0.0 0.0 332.0875990490064 332.0875990490064 22.44772724483049 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KP]{I|L}A 3.8784 - 71 1 1.587 48289.0 1.0 4760 5294 10053 HBL1_DMSO_200M_050219_1,10056 HBL1_DMSO_200M_050219_1,10056,DGYAVDRAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10057 52.499 59.0 993720.0 25 0 92562.0 + 6142 DSYTPKVI 8 88 461.7476926100822 921.4808322869644 2 461.7489501833916 MULTI CID FTMS 0 0 0 10053 1411745.0 0.0573975417217672 -3 0.3122749328613281 4 Unmodified _DSYTPKVI_ ENSG00000133872|ENST00000256255|SARAF;ENST00000517569.1_1_8:29931365-29940465:-|nuORF 34.10243960390752 0.3329570729325616 3 W{M(Oxidation (M))|F}YTVPG 7 6 27.757 0.0 0.0 3.0122 0.0 0.0 0.0 68.05144678287343 68.05144678287343 7.848265625289841 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W{M(Oxidation (M))|F}YTVPG 3.0122 - 148 + 1 1.587 49858.4 1.0 4761 5294 10053 HBL1_DMSO_200M_050219_1,10057 HBL1_DMSO_200M_050219_1,10057,DSYTPKVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10058 52.501 89.0 473220.0 25 0 64623.0 + 22311 LPSESRVNI 9 64 507.7824799452088 1013.5504069572175 2 507.7828552126884 MULTI CID FTMS 0 0 0 10053 855068.8125 0.3627233591588549 -2 0.1929435729980468 5 Unmodified _LPSESRVNI_ ENSG00000066557|ENST00000370952|LRRC40 34.40172386719151 0.1061884637610825 3 {I|L}PSE{I|L} 5 4 58.271 0.0 0.0 5.7492 0.0 0.0 0.0 471.2308748834594 471.2308748834594 45.79689690656103 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PSE{I|L} 5.7492 - 51 + 1 1.587 42986.7 1.0 4762 5294 10053 HBL1_DMSO_200M_050219_1,10058 HBL1_DMSO_200M_050219_1,10058,LPSESRVNI True True LPSESRVNI 52.501088 507.782855212688 13833853.0 10053.0 ENSG00000066557|ENST00000370952|LRRC40 4.872926553090413 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10059 52.503 110.0 560820.0 25 0 79156.0 + 39846 VFFAVLRGW 9 61 365.5419939335199 1093.6041524007596 3 365.5415527224541 MULTI CID FTMS 0 0 0 10053 785694.1875 0.8652610521515124 1 -0.1300888061523437 6 Unmodified _VFFAVLRGW_ REV__ENSG00000129473|ENST00000250405|BCL2L2;REV__ENSG00000258643|ENST00000678502|BCL2L2-PABPN1;REV__nc|ENSG00000258643|Q92843-2|BCL2L2 16.942295170755138 0.3780752226737986 3 V{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 -1 30.445 0.0 0.0 2.7839 0.0 0.0 0.0 697.3762198493122 697.3762198493122 19.47621246364342 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.7839 + + 16 + 1 1.587 58138.8 1.0 4763 5294 10053 HBL1_DMSO_200M_050219_1,10059 HBL1_DMSO_200M_050219_1,10059,VFFAVLRGW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10060 52.506 136.0 405000.0 25 0 20555.0 + 25223 MVAPVTGNDV 10 117 501.7498807908369 1001.485208648474 2 501.7498657107353 MULTI CID FTMS 0 0 0 10053 666922.875 1.0 0 0.0 7 Unmodified _MVAPVTGNDV_ ENSG00000137575|ENST00000260130|SDCBP;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;ENST00000522843.5_1_8:59477592-59488665:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP 20.453626601364224 0.5043500229302764 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WY]WT{I|L} 7 8 + 16.332 0.0 0.0 1.6308 1.6308 72.444 0.0 0.0 0.0 4.113846960971497 4.113846960971497 4.113846960971497 4.593924877592306 0 0.1069758080123702 1.5228787452803376 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WY]WT{I|L};[DN]GT[VP]WT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WY]{[DA]|[EG]}T{I|L};[DN]GT[VP]{[DA]|[EG]}T{I|L} 1.6308;1.1721;0.69914;0.25265 -;-;-;- 383 1 1.587 47955.0 1.0 4764 5294 10053 HBL1_DMSO_200M_050219_1,10060 HBL1_DMSO_200M_050219_1,10060,MVAPVTGNDV False True MVAPVTGNDV 52.506144 501.749865710735 6050402.5 10053.0 nc|ENSG00000137575|O00560-2|SDCBP;;ENSG00000137575|ENST00000260130|SDCBP;;ENST00000522843.5_1_8:59477592-59488665:+|nuORF;;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;;nc|ENSG00000137575|O00560-3|SDCBP 2.108909611900648 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10061 52.513 399.0 336090.0 25 0 29059.0 + 2066 APLSRRLGLVR 11 159 413.2654389748696 0 413.1847717165947 PEAK CID FTMS 0 0 0 10053 90123.2421875 0.5930182358720519 11 -1.2720260620117188 8 Unmodified _APLSRRLGLVR_ REV__ENSG00000144649|ENST00000430121|GASK1A;REV__ENST00000434206.1_1_3:43020805-43095327:+|nuORF 2.843284757254958 0.4761840153648598 3 A 1 -1 6.9897 0.0 0.0 0.84773 0.0 0.0 682.4052085388032 68.05144678287343 750.4566553216766 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.84773 + + 98 + 1 1.587 106319.3 1.0 4765 5294 10053 HBL1_DMSO_200M_050219_1,10061 HBL1_DMSO_200M_050219_1,10061,APLSRRLGLVR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10062 52.522 520.0 263720.0 25 0 157600.0 + 14352 IETPRSSEDES 11 60 625.2824028586462 0 625.2822753787041 PEAK CID FTMS 0 0 0 10053 358141.84375 1.0 0 0.0 9 Unmodified _IETPRSSEDES_ REV__ENSG00000143379|ENST00000692827|SETDB1;REV__ENST00000487584.6_1_1:150898772-150913809:+|nuORF;REV__nc|ENSG00000143379|Q15047-2|SETDB1;REV__nc|ENSG00000143379|Q15047-3|SETDB1;REV__nc|ENSG00000143379|Q15047|SETDB1 2.9952420565917617 0.4761840153648598 3 {I|L} 1 -1 6.9897 0.0 0.0 0.55983 0.0 0.0 185.0722997585047 947.3861178033812 1132.458417561886 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.55983 + + 4 + 1 1.587 105249.5 1.0 4766 5294 10053 HBL1_DMSO_200M_050219_1,10062 HBL1_DMSO_200M_050219_1,10062,IETPRSSEDES False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10063 52.532 527.0 206110.0 25 0 19328.0 + 39152 TYNTQVNFM 9 131 567.2503095835682 1132.4860662339363 2 567.2507812380791 MULTI CID FTMS 0 0 0 10053 352928.84375 1.0 0 0.0 10 Oxidation (M) _TYNTQVNFM(Oxidation (M))_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7684558-7685401:-|nuORF 68.08070601005525 0.0218408846571049 3 [YT]NTQ 5 4 40.393 0.0 0.0 3.5667 0.0 0.0 0.0 522.2014952712988 522.2014952712988 3.7802217037673103 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.6989700043360187 0.2614393726401688 + [YT]NTQ 3.5667 + + 1352 1 1.587 86327.9 1.0 4767 5294 10053 HBL1_DMSO_200M_050219_1,10063 HBL1_DMSO_200M_050219_1,10063,TYNTQVNFM True False TYNTQVNFM 52.531734 567.250781238079 3376639.0 10053.0 ENST00000595288.5_1_19:7684558-7685401:-|nuORF;;ENSG00000076924|ENST00000358368|XAB2 6.782485961914063 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10064 52.537 269.0 616850.0 25 0 47834.0 14487 IGGSYSDVSI 10 178 499.24479910959593 996.475045285992 2 499.2455932497978 MULTI CID FTMS 0 0 0 10053 339773.71875 1.0 0 0.0 11 Unmodified _IGGSYSDVSI_ ENSG00000164082|ENST00000395052|GRM2 20.453626601364224 0.5043500229302764 3 VVS 3 8 22.848 0.0 0.0 2.2929 0.0 0.0 0.0 708.2821491280419 708.2821491280419 10.858565581929652 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 VVS 2.2929 - 630 1 1.587 128742.1 1.0 4768 5294 10053 HBL1_DMSO_200M_050219_1,10064 HBL1_DMSO_200M_050219_1,10064,IGGSYSDVSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10065 52.54 162.0 396940.0 25 0 31137.0 + 14237 KFSPNTSQF 9 133 528.2617421096426 1054.508931286085 2 528.2619506716728 MULTI CID FTMS 0 0 0 10053 304798.0 1.0 0 0.0 12 Unmodified _IDSIFWQF_ nc|ENSG00000154473|O43684-2|BUB3;ENSG00000154473|ENST00000368865|BUB3 19.438996006549623 0.6237395211498085 3 Q{M(Oxidation (M))|F} 2 6 22.519 0.0 0.0 2.1355 0.0 0.0 761.370913563232 0.0 761.370913563232 0.0 11.098588743975544 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 + Q{M(Oxidation (M))|F} 2.1355 + + 433 + 1 1.587 53857.3 1.0 4769 5294 10053 HBL1_DMSO_200M_050219_1,10065 HBL1_DMSO_200M_050219_1,10065,IDSIFWQF False False KFSPNTSQF 52.539907 528.261950671673 2008669.125 10053.0 nc|ENSG00000154473|O43684-2|BUB3;;ENSG00000154473|ENST00000368865|BUB3 2.9309092362721763 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10066 52.554 800.0 269500.0 25 0 18699.0 + 25741 NIPDEELKRV 10 229 404.8908771302425 1211.6508019909274 3 405.2253906130791 MULTI CID FTMS 0 0 0 10053 237222.546875 0.8847695038085507 4 -0.4550094604492187 13 Unmodified _NIPDEELKRV_ ENSG00000087053|ENST00000346299|MTMR2;nc|ENSG00000087053|Q13614-2|MTMR2 33.4449034751529 0.2267874087365337 3 {[QV]|[N{I|L}]|[RA]|[KV]}PDEE{I|L}KRV 10 0 + 64.747 0.0 0.0 5.3437 5.3437 76.945 0.0 0.0 0.0 27.269987279362624 1.972805581256196 1.972805581256196 1.972805581256196 0 0.2887254899964357 2.0 0.8494850021680094 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PDEE{I|L}KRV;{[QV]|[N{I|L}]|[RA]|[KV]}PDEE{I|L}KVR;{[QV]|[N{I|L}]|[RA]|[KV]}PDVT[TP]TRV;{[QV]|[N{I|L}]|[RA]|[KV]}PDV[R{I|L}]GETV;{[QV]|[N{I|L}]|[RA]|[KV]}PDV[R{I|L}]GES{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PDVT[TP]TVR;{[QV]|[N{I|L}]|[RA]|[KV]}PD{[MG]|[TS]}[{I|L}P]TRV;{[QV]|[N{I|L}]|[RA]|[KV]}PDV[R{I|L}]G[{I|L}T]D;{[QV]|[N{I|L}]|[RA]|[KV]}PD{[MG]|[TS]}[{I|L}P]TVR;{[QV]|[N{I|L}]|[RA]|[KV]}PDVT[KP]ETV 5.3437;5.1809;3.862;3.7254;3.7165;3.6992;3.4994;3.4162;3.3365;3.2285 +;-;-;-;-;-;-;-;-;- + 1165 + 1 1.587 168275.5 1.0 4770 5294 10053 HBL1_DMSO_200M_050219_1,10066 HBL1_DMSO_200M_050219_1,10066,NIPDEELKRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10067 52.567 678.0 271910.0 25 0 35541.0 3553 CYGRYWSYGFY 11 139 732.8051184777582 1463.5956840223164 2 732.8062011599541 MULTI CID FTMS 0 0 0 10053 225160.140625 0.7752052752210911 -1 0.1011161804199218 14 Unmodified _CYGRYWSYGFY_ ENSG00000244624|ENST00000334664|KRTAP20-1 20.41453444215458 0.6105011870913812 3 DEAQQDA{M(Oxidation (M))|F}Y 9 9 103.16 0.0 0.0 7.0483 0.0 0.0 378.1661227256639 0.0 378.1661227256639 0.0 80.48479826168207 0.0 0.0 0 1.424742501084005 0.0 1.3243923658886183 1.2302046884880935 DEAQQDA{M(Oxidation (M))|F}Y 7.0483 - 3929 1 1.587 133254.0 1.0 4771 5294 10053 HBL1_DMSO_200M_050219_1,10067 HBL1_DMSO_200M_050219_1,10067,CYGRYWSYGFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10068 52.58 754.0 196940.0 25 0 8587.5 + 10823 FYYEQAPSA 9 187 538.2403514946653 1074.4661500561306 2 538.2419311404228 MULTI CID FTMS 0 0 0 10053 202035.03125 0.4366300865524435 1 -0.1300888061523437 15 Unmodified _FYYEQAPSA_ ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000394455.6_1_14:68196461-68236507:-|nuORF;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-3|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 30.63653989081413 0.1413794767160703 3 A{M(Oxidation (M))|F}PSA 5 6 23.911 0.0 0.0 2.2253 0.0 0.0 583.2641126918918 0.0 583.2641126918918 0.0 3.192175679045341 0.0 0.0 0 0.2887254899964357 0.0 0.8996498648046141 0.0 A{M(Oxidation (M))|F}PSA 2.2253 - 1809 + 1 1.587 118118.5 1.0 4772 5294 10053 HBL1_DMSO_200M_050219_1,10068 HBL1_DMSO_200M_050219_1,10068,FYYEQAPSA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10069 52.593 745.0 380410.0 25 0 73929.0 + 30856 RILQTIRQV 9 200 563.8566977114396 0 563.8569824099541 PEAK CID FTMS 0 0 0 10053 205403.828125 1.0 0 0.0 16 Unmodified _RILQTIRQV_ ENSG00000083099|ENST00000523377|LYRM2;ENST00000521961.1_1_6:90347059-90348185:-|nuORF;ENST00000524153.5_1_6:90346994-90348203:-|nuORF 35.61225514009592 0.0832881035976632 3 ER{I|L}T 4 7 19.206 0.0 0.0 1.7061 0.0 0.0 116.09150409530612 507.3046358697876 623.3961399650937 0.0 0.0 0.0 0.0 0 0.5387254899964358 0.0 0.0 0.6307196863200843 ER{I|L}T 1.7061 - 270 + 1 1.587 216150.5 1.0 4773 5294 10053 HBL1_DMSO_200M_050219_1,10069 HBL1_DMSO_200M_050219_1,10069,RILQTIRQV True True RILQTIRQV 52.592655 563.856982409954 0.0 10053.0 ENST00000524153.5_1_6:90346994-90348203:-|nuORF;;ENSG00000083099|ENST00000523377|LYRM2;;ENST00000521961.1_1_6:90347059-90348185:-|nuORF 5.150852680206299 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10070 52.607 776.0 220980.0 25 0 28570.0 + 10674 FVRYKWPV 8 168 547.8087283112461 1093.602903689292 2 547.8102905154228 MULTI CID FTMS 0 0 0 10053 184848.703125 0.9888916919274496 4 -0.4550094604492187 17 Unmodified _FVRYKWPV_ REV__ENSG00000222018|ENST00000410005|C21orf140 20.871210003555333 0.6025813472596342 3 {M(Oxidation (M))|F}V 2 -1 28.826 0.0 0.0 2.6359 0.0 0.0 0.0 844.4453587320116 844.4453587320116 9.117777946184011 0.0 0.0 0.0 0 0.3252574989159953 0.6989700043360187 0.0 0.0 {M(Oxidation (M))|F}V 2.6359 + + 444 + 1 1.587 135344.3 1.0 4774 5294 10053 HBL1_DMSO_200M_050219_1,10070 HBL1_DMSO_200M_050219_1,10070,FVRYKWPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10071 52.621 800.0 64554.0 25 0 4417.9 + 44574 YPFHKQPPTYV 11 109 688.8525987754924 1375.6906446177848 2 688.8514892458916 MULTI CID FTMS 0 0 0 10053 122007.5390625 0.5802751127743447 4 -0.4550094604492187 18 Unmodified _YPFHKQPPTYV_ ENSG00000100258|ENST00000474879|LMF2;ENST00000504717.1_1_22:50941822-50943237:-|nuORF;nc|ENSG00000100258|Q9BU23-2|LMF2;nc|ENSG00000100258|Q9BU23-3|LMF2 19.361941925380144 0.6323962752489956 3 YH 2 9 12.959 0.0 0.0 0.94199 0.0 0.0 575.2901023788696 497.24460779361567 1072.5347101724851 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 YH 0.94199 - 198 + 1 1.587 41962.7 0.800000011920929 4775 5294 10053 HBL1_DMSO_200M_050219_1,10071 HBL1_DMSO_200M_050219_1,10071,YPFHKQPPTYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10073 52.625 3.4 11719000.0 25 0 1011100.0 + 21031 LPAADVKNI 9 76 470.7767416243672 939.5389303155343 2 470.7769958376884 MULTI CID FTMS 0 0 0 10072 14459797.0 0.810904098981488 -1 0.1300888061523437 1 Unmodified _LPAADVKNI_ ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF 43.77239144664712 0.0547478964384323 3 {I|L}PAADVKN{I|L} 9 0 + 85.174 0.0 0.0 9.0655 9.0655 96.285 0.0 0.0 0.0 44.81939364284848 12.54863339151541 12.54863339151541 13.015384402724592 0 1.055462187404089 2.0 0.0 0.3807196863200844 + + {I|L}PAADVKN{I|L};{I|L}PAADVKGG{I|L} 9.0655;7.6802 +;- + 178 + 1 1.585 38378.0 1.0 4776 5295 10072 HBL1_DMSO_200M_050219_1,10073 HBL1_DMSO_200M_050219_1,10073,LPAADVKNI True True LPAADVKNI 52.625381 470.776995837688 305531040.0 10072.0 ENSG00000139719|ENST00000267199|VPS33A;;ENST00000544349.5_1_12:122735394-122750988:-|nuORF 5.158501466115316 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10074 52.627 9.4 2505800.0 25 0 340900.0 + 4277 DAQTQIQNI 9 52 515.7616358911785 1029.5087188491568 2 515.7621948122978 MULTI CID FTMS 0 0 0 10072 4233847.0 0.4572530690198447 1 -0.0801200866699218 2 Unmodified _DAQTQIQNI_ ENSG00000100934|ENST00000307712|SEC23A;nc|ENSG00000100934|Q15436-2|SEC23A 36.12702656103203 0.0967173616627612 3 {[DA]|[EG]}QTQ 5 4 36.031 0.0 0.0 3.4998 0.0 0.0 0.0 483.25490960526935 483.25490960526935 16.8348435778082 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.0 0.0 + {[DA]|[EG]}QTQ 3.4998 + + 118 1 1.585 24666.3 1.0 4777 5295 10072 HBL1_DMSO_200M_050219_1,10074 HBL1_DMSO_200M_050219_1,10074,DAQTQIQNI True True DAQTQIQNI 52.62656 515.762194812298 50209960.0 10072.0 nc|ENSG00000100934|Q15436-2|SEC23A;;ENSG00000100934|ENST00000307712|SEC23A 6.516462326049805 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10075 52.628 15.0 3025700.0 25 0 496610.0 + 22013 LPPPPPPAM 9 73 458.7515933437354 915.4886337542708 2 458.7517883181572 MULTI CID FTMS 0 0 0 10072 3397627.0 0.4854650620746936 1 -0.0801200866699218 3 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 45.7499826716795 0.0496882803020414 3 {[HG]|PP}P{I|L}PP 6 4 31.176 0.0 0.0 3.4054 0.0 0.0 0.0 314.1176537588471 314.1176537588471 14.186296826174996 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 {[HG]|PP}P{I|L}PP 3.4054 - 150 1 1.585 41933.9 1.0 4778 5295 10072 HBL1_DMSO_200M_050219_1,10075 HBL1_DMSO_200M_050219_1,10075,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10076 52.629 21.0 1884400.0 25 0 165760.0 + 32189 RVVDELDNQM 10 63 609.7926304810543 1217.5707080289085 2 609.7927734255791 MULTI CID FTMS 0 0 0 10072 2175784.25 0.0664854752722232 -2 0.2312049865722656 4 Unmodified _RVVDELDNQM_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 35.61225514009592 0.2039006631696762 3 [RV]VDE{I|L}DNQM 10 0 + 64.997 0.0 0.0 5.3383 5.3383 84.996 0.0 0.0 0.0 3.0444970792913395 58.007754241063054 3.0444970792913395 9.164539485499256 0 0.805462187404089 0.0 0.4247425010840047 0.0 + + [RV]VDE{I|L}DNQM;[RV]VDE{I|L}DGGQM;[RV]VDE{I|L}DN[AG]M;[RV]VDE{I|L}DGG[AG]M;[DN]{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}{I|L}NQM;{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}[Q{I|L}]DNQM;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}[Q{I|L}]DNQM;{NN|[MP]|[D{I|L}]|[EV]}WW{I|L}{I|L}NQM 5.3383;4.5856;4.5856;3.8359;2.5934;2.4159;2.3783;1.5306 +;-;-;-;-;-;-;- + 153 1 1.585 36207.5 1.0 4779 5295 10072 HBL1_DMSO_200M_050219_1,10076 HBL1_DMSO_200M_050219_1,10076,RVVDELDNQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10077 52.63 33.0 1847200.0 25 0 354560.0 + 21272 LPEDKPRLI 9 64 540.824141441904 1079.633729950608 2 540.8243896365166 MULTI CID FTMS 0 0 0 10072 1596857.625 0.4252531906819438 1 -0.0801200866699218 5 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 32.78568957990786 0.1150597335874693 3 {I|L}PEDK 5 4 69.553 0.0 0.0 6.4422 0.0 0.0 0.0 494.3092516119388 494.3092516119388 36.63303128443836 0.0 0.0 0.0 0 1.035666875892183 1.6989700043360187 0.4247425010840047 0.0 + {I|L}PEDK 6.4422 + + 65 + 1 1.585 51213.2 1.0 4780 5295 10072 HBL1_DMSO_200M_050219_1,10077 HBL1_DMSO_200M_050219_1,10077,LPEDKPRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10078 52.631 49.0 1101900.0 25 0 112250.0 + 13032 HATIIPKV 8 71 439.7764941518383 877.5384353704766 2 439.7764770388603 MULTI CID FTMS 0 0 0 10072 1065331.25 0.4359703898317483 1 -0.0801200866699218 6 Unmodified _HATIIPKV_ ENSG00000105568|ENST00000322088|PPP2R1A 46.92087301778293 0.1537303740847981 3 [HA]T{I|L}{I|L} 5 3 44.922 0.0 0.0 5.119 0.0 0.0 0.0 339.2028675144107 339.2028675144107 28.239087409443187 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.8494850021680094 0.0 + [HA]T{I|L}{I|L} 5.119 + + 99 1 1.585 49619.4 1.0 4781 5295 10072 HBL1_DMSO_200M_050219_1,10078 HBL1_DMSO_200M_050219_1,10078,HATIIPKV False True HATIIPKV 52.631392 439.77647703886 17063760.0 10072.0 ENSG00000105568|ENST00000322088|PPP2R1A 6.397561073303223 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10079 52.635 161.0 676600.0 25 0 74911.0 + 19096 LDSDDSGRFG 10 108 534.7356301170702 1067.4567073009405 2 534.7352172732353 MULTI CID FTMS 0 0 0 10072 581770.1875 1.0 0 0.0 7 Unmodified _LDSDDSGRFG_ REV__ENSG00000121075|ENST00000644296|TBX4;REV__nc|ENSG00000121075|P57082|TBX4 15.248480904072842 0.5916873121453583 3 {I|L}D 2 -1 25.969 0.0 0.0 2.4328 0.0 0.0 0.0 836.3216410053105 836.3216410053105 12.414436937450157 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}D 2.4328 + + 124 + 1 1.585 85988.8 1.0 4782 5295 10072 HBL1_DMSO_200M_050219_1,10079 HBL1_DMSO_200M_050219_1,10079,LDSDDSGRFG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10080 52.638 153.0 392530.0 25 0 51815.0 28988 QDSLHQPQYVE 11 68 672.3144265477721 1342.614300162344 2 672.3149902224541 MULTI CID FTMS 0 0 0 10072 462466.0625 0.6498224712805691 1 -0.0801200866699218 8 Unmodified _QDSLHQPQYVE_ ENSG00000114374|ENST00000338981|USP9Y;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;nc|ENSG00000114374|O00507-2|USP9Y 12.240655878213236 0.7805268987462184 3 QS{M(Oxidation (M))|F}SA 5 9 25.93 0.0 0.0 1.9313 0.0 0.0 555.2656195976941 264.09958826236567 819.3652078600599 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 QS{M(Oxidation (M))|F}SA 1.9313 - 168 + 1 1.585 49451.7 1.0 4783 5295 10072 HBL1_DMSO_200M_050219_1,10080 HBL1_DMSO_200M_050219_1,10080,QDSLHQPQYVE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10081 52.64 139.0 766160.0 25 0 69541.0 + 5698 DPITRRTKG 9 119 348.5381974441132 1042.5927629325397 3 348.5380432009697 MULTI CID FTMS 0 0 0 10072 437189.03125 0.2278135312230785 -2 0.2312049865722656 9 Unmodified _DPITRRTKG_ ENST00000405201.5_1_12:124808981-124809239:-|nuORF 13.042465956692816 0.4836390050082244 3 DPYRP 5 6 54.438 0.0 0.0 5.2214 0.0 0.0 0.0 411.2730806940063 411.2730806940063 38.24031267727719 0.0 0.0 0.0 0 0.25 1.6989700043360187 0.0 0.0 DPYRP 5.2214 - 133 + 1 1.585 95574.2 1.0 4784 5295 10072 HBL1_DMSO_200M_050219_1,10081 HBL1_DMSO_200M_050219_1,10081,DPITRRTKG False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10082 52.645 236.0 610860.0 25 0 120870.0 23529 LTLETVPATV 10 116 522.3023946112248 0 522.3027221560478 PEAK CID FTMS 0 0 0 10072 423481.46875 0.3924044126811011 -2 0.2312049865722656 10 Unmodified _LTLETVPATV_ ENST00000440748.1_1_7:37415149-37415623:+|nuORF 13.90604991867851 0.345182617568752 3 TE 2 8 10.217 0.0 0.0 0.97992 0.0 0.0 228.26487115428705 581.2131441705686 809.4780153248557 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 TE 0.97992 - 60 + 1 1.585 115057.8 1.0 4785 5295 10072 HBL1_DMSO_200M_050219_1,10082 HBL1_DMSO_200M_050219_1,10082,LTLETVPATV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10083 52.647 112.0 367610.0 25 0 26293.0 295 ADRSTFENL 9 91 526.7531218217114 1051.4916907102229 2 526.7534667849541 MULTI CID FTMS 0 0 0 10072 329349.21875 1.0 0 0.0 11 Unmodified _ADRSTFENL_ ENSG00000128052|ENST00000263923|KDR;nc|ENSG00000128052|P35968-2|KDR;nc|ENSG00000128052|P35968-3|KDR 15.847184025352805 0.4077185912009129 3 {I|L} 1 8 12.218 0.0 0.0 1.162 0.0 0.0 920.3969011367836 0.0 920.3969011367836 0.0 -6.22486274231747 -6.22486274231747 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.162 + + 133 + 1 1.585 37663.3 1.0 4786 5295 10072 HBL1_DMSO_200M_050219_1,10083 HBL1_DMSO_200M_050219_1,10083,ADRSTFENL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10084 52.65 143.0 777170.0 25 0 118800.0 + 2744 ATIPKFTNT 9 121 496.7734739852614 991.5323950373228 2 496.7741577029228 MULTI CID FTMS 0 0 0 10072 309079.59375 0.4103659000067049 -1 0.1300888061523437 12 Unmodified _ATIPKFTNT_ chr2:96335848-96341675|38|14.97|0.71|4.39|+|ENST00000435975|NCAPH,NCAPH;ENSG00000121152|ENST00000240423|NCAPH;ENST00000477409.1_1_2:97001567-97024936:+|nuORF 32.78568957990786 0.1150597335874693 3 [R{M(Oxidation (M))|F}]TNT{M(Oxidation (M))|F}PG 8 8 21.411 0.0 0.0 2.1594 0.0 0.0 0.0 68.05138574771718 68.05138574771718 0.7711470149615067 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.2742275032520141 [R{M(Oxidation (M))|F}]TNT{M(Oxidation (M))|F}PG 2.1594 - 582 + 1 1.585 86854.9 1.0 4787 5295 10072 HBL1_DMSO_200M_050219_1,10084 HBL1_DMSO_200M_050219_1,10084,ATIPKFTNT True True ATIPKFTNT 52.650081 496.774157702923 5404498.5 10072.0 ENSG00000121152|ENST00000240423|NCAPH;;chr2:96335848-96341675|38|14.97|0.71|4.39|+|ENST00000435975|NCAPH,NCAPH;;ENST00000477409.1_1_2:97001567-97024936:+|nuORF 2.45026969909668 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10085 52.661 610.0 693430.0 25 0 84114.0 + 314 ADVVVRMGEFR 11 143 639.8374982544077 1277.660443575615 2 639.8378784060478 MULTI CID FTMS 0 0 0 10072 280934.9375 0.0450498637888156 -2 0.2312049865722656 13 Unmodified _ADVVVRMGEFR_ REV__ENSG00000185313|ENST00000449082|SCN10A 16.149105407346934 0.6992268271266642 3 [TP]SVVAVTV 9 -1 72.492 0.0 0.0 5.6738 0.0 0.0 0.0 421.14703566852967 421.14703566852967 30.14381004625137 0.0 0.0 0.0 0 0.0 0.9208187539523752 3.09669816197406 0.0 [TP]SVVAVTV 5.6738 - 4598 1 1.585 304306.5 1.0 4788 5295 10072 HBL1_DMSO_200M_050219_1,10085 HBL1_DMSO_200M_050219_1,10085,ADVVVRMGEFR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10086 52.663 125.0 727360.0 25 0 33116.0 45476 YTLDDMFV 8 140 502.2248886896159 0 502.2245666384697 PEAK CID FTMS 0 0 0 10072 247886.375 1.0 0 0.0 14 Unmodified _YTLDDMFV_ ENSG00000152404|ENST00000282251|CWF19L2;nc|ENSG00000152404|Q2TBE0-2|CWF19L2 10.183394434864962 0.5394990767616434 3 VDQ 3 7 14.693 0.0 0.0 1.4657 0.0 0.0 186.98448601425588 470.27658377362616 657.261069787882 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VDQ 1.4657 - 152 + 1 1.585 73889.8 1.0 4789 5295 10072 HBL1_DMSO_200M_050219_1,10086 HBL1_DMSO_200M_050219_1,10086,YTLDDMFV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10087 52.675 671.0 140850.0 25 0 16612.0 + 12893 GVYNGKTFNQV 11 136 613.8113429676246 1225.608133002049 2 613.8104736208916 MULTI CID FTMS 0 0 0 10072 219279.46875 0.1737216070436328 1 -0.0801200866699218 15 Unmodified _GVYNGKTFNQV_ ENSG00000115268|ENST00000592588|RPS15;ENST00000522454.1_1_5:164028010-164028223:-|nuORF 61.60191391372663 0.0626439052904852 3 [VG]Y[KC]Q{M(Oxidation (M))|F} 7 6 49.595 0.0 0.0 4.0466 0.0 0.0 0.0 397.1830538385376 397.1830538385376 23.156212797856227 0.0 0.0 0.0 0 1.0114393726401687 1.6989700043360187 0.0 0.8494850021680094 [VG]Y[KC]Q{M(Oxidation (M))|F} 4.0466 - 2943 + 1 1.585 75261.1 1.0 4790 5295 10072 HBL1_DMSO_200M_050219_1,10087 HBL1_DMSO_200M_050219_1,10087,GVYNGKTFNQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10088 52.689 782.0 373090.0 25 0 58269.0 + 22329 LPSKMIPI 8 242 449.7770759012932 897.5395988693864 2 449.7771179080009 MULTI CID FTMS 0 0 0 10072 208903.53125 0.643200031559066 1 -0.0801200866699218 16 Unmodified _LPSKMIPI_ REV__ENSG00000126733|ENST00000373125|DACH2;REV__nc|ENSG00000126733|Q96NX9-2|DACH2;REV__nc|ENSG00000126733|Q96NX9-3|DACH2;REV__nc|ENSG00000126733|Q96NX9-4|DACH2 12.531546534597751 0.7257836412119636 3 {[QV]|[N{I|L}]|[RA]|[KV]}G 3 -1 16.405 0.0 0.0 1.8277 0.0 0.0 0.0 610.3304063247176 610.3304063247176 3.305556951463973 0.0 0.0 0.0 0 0.6989700043360187 0.1804560644581313 0.0 0.1923877696554315 {[QV]|[N{I|L}]|[RA]|[KV]}G 1.8277 - 1087 1 1.585 225894.0 1.0 4791 5295 10072 HBL1_DMSO_200M_050219_1,10088 HBL1_DMSO_200M_050219_1,10088,LPSKMIPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10089 52.694 238.0 288360.0 25 0 53413.0 + -1 SELALKCECCK 11 86 699.3138783255497 1396.6132037178993 2 699.3129150271416 MULTI CID FTMS 0 0 0 10072 206645.640625 0.2059288024636241 1 -0.0801200866699218 17 3 Carbamidomethyl (C) _SELALKC(Carbamidomethyl (C))EC(Carbamidomethyl (C))C(Carbamidomethyl (C))K_ REV__ENSG00000143355|ENST00000367387|LHX9;REV__nc|ENSG00000143355|Q9NQ69-2|LHX9;REV__nc|ENSG00000143355|Q9NQ69-3|LHX9;REV__nc|ENSG00000143355|Q9NQ69-4|LHX9 5.731851221503515 0.8481046878870278 3 {M(Oxidation (M))|F}C[QA]S{I|L}TT 8 -1 23.581 0.0 0.0 1.6885 0.0 0.0 365.1279264735618 177.0671785943969 542.1951050679587 0.0 0.0 0.0 0.0 0 0.5 0.0 1.1237125054200234 0.0 {M(Oxidation (M))|F}C[QA]S{I|L}TT 1.6885 - 343 + 1 1.585 55067.9 1.0 4792 5295 10072 HBL1_DMSO_200M_050219_1,10089 HBL1_DMSO_200M_050219_1,10089,SELALKCECCK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10090 52.696 86.0 726680.0 25 0 50615.0 + 25304 NAFLSKSSV 9 93 476.7588972643523 0 476.7582885622978 PEAK CID FTMS 0 0 0 10072 190012.296875 0.3720685132064147 -1 0.1300888061523437 18 Unmodified _NAFLSKSSV_ ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213 31.26834338654808 0.1046433560557175 3 {M(Oxidation (M))|F}{I|L}S 3 6 25.445 0.0 0.0 2.6742 0.0 0.0 185.0794877886671 416.2148836725219 601.294371461189 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {M(Oxidation (M))|F}{I|L}S 2.6742 + + 106 + 1 1.585 53984.8 1.0 4793 5295 10072 HBL1_DMSO_200M_050219_1,10090 HBL1_DMSO_200M_050219_1,10090,NAFLSKSSV True True NAFLSKSSV 52.696058 476.758288562298 3120760.0 10072.0 ENSG00000173821|ENST00000582970|RNF213;;nc|ENSG00000173821|Q63HN8|RNF213;;nc|ENSG00000173821|Q63HN8-4|RNF213 6.871711572011312 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10091 52.699 144.0 546650.0 25 0 114320.0 20734 LLSLFYSTTV 10 76 381.8804143534679 1142.619413660604 3 381.8800842165947 MULTI CID FTMS 0 0 0 10072 172966.15625 0.3941743223803216 -1 0.1300888061523437 19 Unmodified _LLSLFYSTTV_ nc|ENSG00000211899|P01871|IGHM 20.453626601364224 0.5043500229302764 3 {I|L}V[PG]EW 6 9 29.654 0.0 0.0 2.5952 0.0 0.0 0.0 458.2380465143188 458.2380465143188 15.701075205960889 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}V[PG]EW 2.5952 - 60 + 1 1.585 70041.1 1.0 4794 5295 10072 HBL1_DMSO_200M_050219_1,10091 HBL1_DMSO_200M_050219_1,10091,LLSLFYSTTV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10092 52.701 113.0 622210.0 25 0 49924.0 -1 LPPPPPPAM 9 123 466.747824258661 931.4810955841222 2 466.7493774294853 MULTI CID FTMS 0 0 0 10072 155269.140625 1.0 0 0.0 20 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 20.871210003555333 0.2717241269066626 3 {[DA]|[EG]}V{I|L} 4 -1 22.703 0.0 0.0 2.4373 0.0 0.0 0.0 530.241538049219 530.241538049219 4.867282444438548 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[DA]|[EG]}V{I|L} 2.4373 - 201 1 1.585 57345.6 1.0 4795 5295 10072 HBL1_DMSO_200M_050219_1,10092 HBL1_DMSO_200M_050219_1,10092,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10094 52.706 78.0 701730.0 25 0 37221.0 + 15454 IPQEFQKTV 9 103 545.3022944537452 1088.5900359742902 2 545.3030273318291 MULTI CID FTMS 0 0 0 10093 727389.5 0.2064423487086949 2 -0.2448005676269531 1 Unmodified _IPQEFQKTV_ ENSG00000116521|ENST00000302631|SCAMP3;ENST00000462151.5_1_1:155228611-155230144:-|nuORF;ENST00000472397.5_1_1:155226487-155230214:-|nuORF;ENST00000490999.5_1_1:155226066-155230310:-|nuORF;nc|ENSG00000116521|O14828-2|SCAMP3 47.594388314883695 0.0456443387682827 3 {I|L}PQE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KTV 9 0 + 54.768 0.0 0.0 5.0311 5.0311 88.725 0.0 0.0 0.0 -8.018951286913577 13.46787486224656 -8.018951286913577 54.76818615371121 0 1.2179001828205482 1.2218487496163564 0.7059771852360797 0.0 + + {I|L}PQE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KTV 5.0311 + + 774 + 1 1.585 51248.9 1.0 4796 5296 10093 HBL1_DMSO_200M_050219_1,10094 HBL1_DMSO_200M_050219_1,10094,IPQEFQKTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10095 52.707 75.0 708050.0 25 0 121700.0 + 39058 TVVKAISGV 9 88 437.2738321247976 872.5331113163952 2 437.2738220095634 MULTI CID FTMS 0 0 0 10093 647713.5625 0.6047345489625044 2 -0.2448005676269531 2 Unmodified _TVVKAISGV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 34.40172386719151 0.1061884637610825 3 {[TV]|[{I|L}S]}V 3 6 35.062 0.0 0.0 4.0184 0.0 0.0 0.0 570.3281954400999 570.3281954400999 18.34208697584131 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 + {[TV]|[{I|L}S]}V 4.0184 + + 710 + 1 1.585 45846.7 1.0 4797 5296 10093 HBL1_DMSO_200M_050219_1,10095 HBL1_DMSO_200M_050219_1,10095,TVVKAISGV True True TVVKAISGV 52.707239 437.273822009563 14634336.0 10093.0 ENSG00000180574|ENST00000538173|EIF2S3B;;ENSG00000130741|ENST00000253039|EIF2S3;;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 5.668421586354573 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10096 52.708 35.0 1120500.0 25 0 205770.0 + 14477 IGFENHETV 9 63 523.2508300714302 1044.4871072096605 2 523.2509033083916 MULTI CID FTMS 0 0 0 10093 1143988.375 0.7742206111261505 -1 0.0801200866699218 3 Unmodified _IGFENHETV_ ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF 32.78568957990786 0.1150597335874693 3 {I|L}G{M(Oxidation (M))|F}E 4 5 42.823 0.0 0.0 4.0999 0.0 0.0 0.0 595.2463472955686 595.2463472955686 24.9429634748526 0.0 0.0 0.0 0 0.4247425010840047 1.154901959985743 0.3494850021680094 0.0 + {I|L}G{M(Oxidation (M))|F}E 4.0999 + + 91 + 1 1.585 34708.7 1.0 4798 5296 10093 HBL1_DMSO_200M_050219_1,10096 HBL1_DMSO_200M_050219_1,10096,IGFENHETV True True IGFENHETV 52.708416 523.250903308392 10907085.0 10093.0 ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 6.276543617248535 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10097 52.71 66.0 577500.0 25 0 47372.0 + + 39720 DAQAFEREV 9 78 532.7849061537099 1063.5552593742198 2 532.7848998904228 MULTI CID FTMS 0 0 0 10093 781156.6875 0.01290042820005 9 -1.0618171691894531 4 Unmodified _VEKAYQVVE_ ENST00000589179.5_1_12:53590293-53590665:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7;ENSG00000139626|ENST00000267082|ITGB7 24.020572477871973 0.2255576514309169 3 {[DA]|[EG]}QY[K{I|L}]VEV 9 -1 + 52.416 0.0 0.0 4.9284 4.9284 83.213 0.0 0.0 0.0 12.887955392469692 16.478174818886366 12.887955392469692 9.06295947543775 0 0.0 1.0457574905606752 0.5297966019298022 0.3807196863200844 {[DA]|[EG]}QY[K{I|L}]VEV;{[DA]|[EG]}QVY[K{I|L}]EV;{[DA]|[EG]}[AG]Y[K{I|L}]VEV;{[DA]|[EG]}QYV[K{I|L}]EV;{[QG]|[NA]}EY[K{I|L}]VEV;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}Y[K{I|L}]EV;[YE][K{I|L}]GQVEV;{[DA]|[EG]}[AG]VY[K{I|L}]EV;{[DA]|[EG]}[AG]YV[K{I|L}]EV;{[QG]|[NA]}EVY[K{I|L}]EV 4.9284;4.0762;4.0626;3.7932;3.7166;3.3748;3.2359;3.2105;2.9274;2.8645 -;-;-;-;-;-;-;-;-;- 200 1 1.585 39215.2 1.0 4799 5296 10093 HBL1_DMSO_200M_050219_1,10097 HBL1_DMSO_200M_050219_1,10097,VEKAYQVVE False False DAQAFEREV 52.710087 532.784899890423 612456.4375 10093.0 ENST00000589179.5_1_12:53590293-53590665:-|nuORF;;nc|ENSG00000139626|P26010-2|ITGB7;;ENSG00000139626|ENST00000267082|ITGB7 1.169838547706604 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10098 52.712 69.0 610880.0 25 0 110270.0 + 24907 MPPDPRPTL 9 67 512.268184858621 1022.521816784042 2 512.2681152224541 MULTI CID FTMS 0 0 0 10093 751110.5 1.0 0 0.0 5 Unmodified _MPPDPRPTL_ ENST00000465017.5_1_9:139685822-139687379:+|nuORF;ENST00000483187.5_1_9:139685862-139687379:+|nuORF 13.042465956692816 0.4836390050082244 3 MP 2 7 45.217 0.0 0.0 4.4221 0.0 0.0 0.0 791.4051240613652 791.4051240613652 37.144556508912174 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + MP 4.4221 + + 52 + 1 1.585 41400.9 1.0 4800 5296 10093 HBL1_DMSO_200M_050219_1,10098 HBL1_DMSO_200M_050219_1,10098,MPPDPRPTL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10099 52.716 235.0 377610.0 25 0 32504.0 + 26489 NTSCGHQHFF 10 118 393.1649831290996 1176.4731199874989 3 393.1651489138603 MULTI CID FTMS 0 0 0 10093 343465.3125 1.0 0 0.0 6 Unmodified _NTSCGHQHFF_ REV__ENSG00000242247|ENST00000263245|ARFGAP3 11.517880264261096 0.6542831674726655 3 {[QS]|[NT]}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}M{[{M(Oxidation (M))|F}H]|[RQ]} 9 -1 + 42.87 0.0 0.0 3.6439 3.6439 81.891 0.0 0.0 0.0 7.591668029162889 32.21389944336234 7.591668029162889 12.327796776480472 0 0.0 0.0 1.0418727718234408 0.6307196863200843 {[QS]|[NT]}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}M{[{M(Oxidation (M))|F}H]|[RQ]};{[SA]|[TG]}GS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}M{[{M(Oxidation (M))|F}H]|[RQ]};[YK]CCV{M(Oxidation (M))|F}M{[{M(Oxidation (M))|F}H]|[RQ]};{[QS]|[NT]}{[CP]|[EA]}[QT]VM{[{M(Oxidation (M))|F}H]|[RQ]};AA{[{M(Oxidation (M))|F}C]|[YS]}[HD]VM{[{M(Oxidation (M))|F}H]|[RQ]};[YK]CC{M(Oxidation (M))|F}VM{[{M(Oxidation (M))|F}H]|[RQ]};[YK]W{[YC]|[HE]}M{[{M(Oxidation (M))|F}H]|[RQ]};{[SA]|[TG]}G{[CP]|[EA]}[QT]VM{[{M(Oxidation (M))|F}H]|[RQ]};{[SA]|[TG]}[YR]{[YC]|[HE]}M{[{M(Oxidation (M))|F}H]|[RQ]} 3.6439;2.5961;1.5802;1.5346;1.3756;1.3244;1.1348;0.81408;0.091606 -;-;-;-;-;-;-;-;- 171 1 1.585 78280.8 1.0 4801 5296 10093 HBL1_DMSO_200M_050219_1,10099 HBL1_DMSO_200M_050219_1,10099,NTSCGHQHFF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10100 52.725 532.0 271280.0 25 0 29248.0 44763 YPLNLPSV 8 147 451.7530328454394 901.4915127576788 2 451.7527648806572 MULTI CID FTMS 0 0 0 10093 347965.6875 0.37442682935933 29 -2.84869384765625 7 Unmodified _YPLNLPSV_ ENSG00000158528|ENST00000433360|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A;nc|ENSG00000158528|Q9ULJ8|PPP1R9A 28.486842064014134 0.4448922141344407 3 YP{I|L} 3 5 46.95 0.0 0.0 5.2081 0.0 0.0 0.0 525.2677706354124 525.2677706354124 25.0784749426326 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YP{I|L} 5.2081 + + 419 + 1 1.585 114436.6 1.0 4802 5296 10093 HBL1_DMSO_200M_050219_1,10100 HBL1_DMSO_200M_050219_1,10100,YPLNLPSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10101 52.73 224.0 374280.0 25 0 81412.0 -1 0 97 399.7816118390918 797.5486707449836 2 399.7814208865166 MULTI CID FTMS 0 0 0 10093 321850.5 1.0 0 0.0 8 3 {I|L}R 2 -1 25.217 0.0 0.0 3.1618 0.0 0.0 0.0 525.3529245419301 525.3529245419301 12.74227503252014 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}R 3.1618 - 34 + 1 1.585 72086.3 1.0 4803 5296 10093 HBL1_DMSO_200M_050219_1,10101 HBL1_DMSO_200M_050219_1,10101, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10102 52.738 499.0 215360.0 25 0 24541.0 + 1403 ALCEENMRGV 10 125 561.2578184279985 1120.5010839227969 2 561.2583495974541 MULTI CID FTMS 0 0 0 10093 299348.3125 0.8950956253860911 -1 0.0801200866699218 9 Unmodified _ALCEENMRGV_ ENSG00000167658|ENST00000309311|EEF2 45.69961567697781 0.105390671673896 3 [{I|L}A]CEENMRGV 10 0 + 76.615 0.0 0.0 6.8375 6.8375 89.475 0.0 0.0 0.0 56.11311113309876 2.388248390781285 2.388248390781285 9.049471895720984 0 0.9247425010840048 2.0 1.174742501084005 0.0 + + [{I|L}A]CEENMRGV;[{I|L}A]CEENRSTV;[{I|L}A]CEEGGMRGV;[{I|L}A]CEENRSS{I|L};[{I|L}A]CEEGGRSTV;[{I|L}A]CEEGGRSS{I|L};[{I|L}A]CE[{M(Oxidation (M))|F}T][HT]TV;[{I|L}A]CE[{M(Oxidation (M))|F}T][HT]S{I|L};[{I|L}A]C{M(Oxidation (M))|F}Y[WY]GV;[EC]E[QA]VCRA{I|L} 6.8375;6.0299;6.0196;5.8506;5.212;5.0327;3.7354;3.5561;3.1776;0.53227 +;-;-;-;-;-;-;-;-;- + 254 + 1 1.585 85344.9 1.0 4804 5296 10093 HBL1_DMSO_200M_050219_1,10102 HBL1_DMSO_200M_050219_1,10102,ALCEENMRGV True True ALCEENMRGV 52.738489 561.258349597454 3048302.5 10093.0 ENSG00000167658|ENST00000309311|EEF2 5.316516637802124 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10103 52.748 559.0 270940.0 25 0 12465.0 + 32183 RVVDELDNQM 10 165 617.7905268363077 1233.5665007394152 2 617.7911865115166 MULTI CID FTMS 0 0 0 10093 221037.09375 0.4981856464064318 -1 0.0801200866699218 10 Oxidation (M) _RVVDELDNQM(Oxidation (M))_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 63.22749603027936 0.0281198777558511 3 [RV]VDE{I|L}DNQ{M(Oxidation (M))|F} 10 0 + 85.547 0.0 0.0 6.9349 6.9349 89.985 0.0 0.0 0.0 10.30211126301468 48.96607250880536 10.30211126301468 9.164539485499247 0 1.055462187404089 0.8239087409443188 0.6505149978319906 0.6505149978319906 + + [RV]VDE{I|L}DNQ{M(Oxidation (M))|F};[RV]VDE{I|L}DN[AG]{M(Oxidation (M))|F};[RV]VDE{I|L}DGGQ{M(Oxidation (M))|F};[RV]VDE{I|L}DGG[AG]{M(Oxidation (M))|F};[KP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}DNQ{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[W{I|L}]E{I|L}DNQ{M(Oxidation (M))|F};[VS]{[QV]|[N{I|L}]|[RA]|[KV]}{[QG]|[NA]}{I|L}DNQ{M(Oxidation (M))|F};[RV]{[SA]|[TG]}{[QG]|[NA]}{I|L}DNQ{M(Oxidation (M))|F};[KP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}DN[AG]{M(Oxidation (M))|F};[KP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}DGGQ{M(Oxidation (M))|F} 6.9349;6.192;6.192;5.452;4.7986;4.5546;4.2318;4.1424;4.0557;4.0557 +;-;-;-;-;-;-;-;-;- + 1206 1 1.585 115560.8 1.0 4805 5296 10093 HBL1_DMSO_200M_050219_1,10103 HBL1_DMSO_200M_050219_1,10103,RVVDELDNQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10104 52.759 618.0 515040.0 25 0 55075.0 + 22536 LPWKCLVV 8 238 479.2821056428199 956.5496583524398 2 479.2843200564384 MULTI CID FTMS 0 0 0 10093 213145.453125 0.2667656068718484 5 -0.5540313720703125 11 Unmodified _LPWKCLVV_ ENST00000479431.1_1_11:131781360-132016587:+|nuORF;nc|ENSG00000182667|Q9P121-3|NTM;nc|ENSG00000182667|Q9P121-4|NTM;nc|ENSG00000182667|Q9P121|NTM;nc|ENSG00000183715|Q14982-4|OPCML;nc|ENSG00000183715|Q14982|OPCML 19.438996006549623 0.6237395211498085 3 {[DA]|[EG]}[WH]GEG{I|L} 8 7 33.738 0.0 0.0 3.5271 0.0 0.0 0.0 88.14641177071101 88.14641177071101 10.60263226318802 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.642101168465426 0.0 {[DA]|[EG]}[WH]GEG{I|L} 3.5271 - 2636 1 1.585 236107.2 1.0 4806 5296 10093 HBL1_DMSO_200M_050219_1,10104 HBL1_DMSO_200M_050219_1,10104,LPWKCLVV False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 10105 52.763 233.0 382950.0 25 0 20789.0 + -1 FAYPLLVV 8 107 482.2789920391311 962.5434311450622 2 482.2795898318291 MULTI CID FTMS 0 0 0 10093 193747.265625 0.3763332171742208 2 -0.2448005676269531 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))FAYPLLVV_ REV__ENST00000380698.4_1_6:2900796-2903441:-|nuORF 17.086550045450526 0.6584923310065985 3 [{M(Oxidation (M))|F}T]{I|L}PVR[KC] 8 -1 + 19.161 0.0 0.0 1.9907 1.9907 69.831 0.0 0.0 0.0 -2.333749374444448 1.2371250542002343 -2.333749374444448 2.7177504087546147 0 0.4247425010840047 0.0 0.0 0.0 [{M(Oxidation (M))|F}T]{I|L}PVR[KC];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RRM[K{I|L}];[{M(Oxidation (M))|F}T]{I|L}PVHH{I|L} 1.9907;1.7083;1.678 -;-;- 152 + 1 1.585 74163.5 1.0 4807 5296 10093 HBL1_DMSO_200M_050219_1,10105 HBL1_DMSO_200M_050219_1,10105,FAYPLLVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10106 52.774 581.0 228040.0 25 0 24048.0 + + 17144 KILTEFREA 9 159 553.8140290496656 1105.613505166131 2 553.8149291872978 MULTI CID FTMS 0 0 0 10093 185829.3125 1.0 0 0.0 13 Unmodified _KLIDFSRDL_ nc|ENSG00000100888|Q9HCK8-2|CHD8;ENSG00000100888|ENST00000646647|CHD8 32.78568957990786 0.1150597335874693 3 K{I|L}{I|L}TE{[RE]|[WV]}{[MS]|[{M(Oxidation (M))|F}A]} 9 -1 + 69.94 0.0 0.0 6.3259 6.3259 87.338 0.0 0.0 0.0 57.2902978743183 2.377716441286452 2.377716441286452 8.243841458328887 0 1.3807196863200843 1.154901959985743 0.5709991640913001 0.0 K{I|L}{I|L}TE{[RE]|[WV]}{[MS]|[{M(Oxidation (M))|F}A]};K{I|L}{I|L}DE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L};K{I|L}{I|L}TE[W{I|L}]{[CT]|[{M(Oxidation (M))|F}G]};K{I|L}{I|L}TE[YK][DP];K{I|L}D{I|L}E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L};K{I|L}AEE[R{M(Oxidation (M))|F}]T{I|L};K{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]{[MS]|[{M(Oxidation (M))|F}A]};K{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[W{M(Oxidation (M))|F}]GV;K{I|L}D[DV][R{M(Oxidation (M))|F}]T{I|L};K{I|L}A[WH][HT]T{I|L} 6.3259;5.5803;5.3768;5.2892;4.5835;4.1248;3.9603;3.9157;3.8525;3.5037 -;-;-;-;-;-;-;-;-;- 564 + 1 1.585 101973.7 1.0 4808 5296 10093 HBL1_DMSO_200M_050219_1,10106 HBL1_DMSO_200M_050219_1,10106,KLIDFSRDL False False KILTEFREA 52.773645 553.814929187298 1770970.5 10093.0 nc|ENSG00000100888|Q9HCK8-2|CHD8;;ENSG00000100888|ENST00000646647|CHD8 5.076521158218384 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10107 52.786 632.0 143420.0 25 0 10259.0 25854 NLEAWRETFPQ 11 136 695.838729248529 1389.662905563858 2 696.3420898318291 MULTI CID FTMS 0 0 0 10093 187749.796875 0.2340698867674009 2 -0.2448005676269531 14 Unmodified _NLEAWRETFPQ_ ENSG00000115705|ENST00000329066|TPO;nc|ENSG00000115705|P07202-2|TPO;nc|ENSG00000115705|P07202-3|TPO;nc|ENSG00000115705|P07202-4|TPO;nc|ENSG00000115705|P07202-5|TPO;nc|ENSG00000115705|P07202-7|TPO;nc|ENSG00000115705|P07202-8|TPO 11.494710602746466 0.7960433852372589 3 {[QV]|[N{I|L}]|[RA]|[KV]}NAN 5 8 43.258 0.0 0.0 3.1128 0.0 0.0 0.0 860.4125460260374 860.4125460260374 12.477568795947676 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}NAN 3.1128 - 420 + 1 1.585 70130.5 1.0 4809 5296 10093 HBL1_DMSO_200M_050219_1,10107 HBL1_DMSO_200M_050219_1,10107,NLEAWRETFPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10108 52.797 656.0 125970.0 25 0 32676.0 + -1 DEKYMRTGYFY 11 92 744.8286488558616 0 744.8281127810478 PEAK CID FTMS 0 0 0 10093 181129.515625 1.0 0 0.0 15 Oxidation (M) _DEKYM(Oxidation (M))RTGYFY_ REV__ENSG00000099954|ENST00000262608|CECR2;REV__nc|ENSG00000099954|Q9BXF3-2|CECR2;REV__nc|ENSG00000099954|Q9BXF3|CECR2 8.155526934196011 0.4672964927559179 3 ADQQAE 6 -1 38.008 0.0 0.0 2.5549 0.0 0.0 328.13542038508336 514.2058986072145 842.3413189922978 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 ADQQAE 2.5549 - 292 + 1 1.585 64076.8 1.0 4810 5296 10093 HBL1_DMSO_200M_050219_1,10108 HBL1_DMSO_200M_050219_1,10108,DEKYMRTGYFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10109 52.809 699.0 346150.0 25 0 25823.0 + 22072 LPPPSPAHL 9 190 464.7661320370119 927.5177111408238 2 464.7665893435478 MULTI CID FTMS 0 0 0 10093 161436.109375 0.6689599396247446 2 -0.2448005676269531 16 Unmodified _LPPPSPAHL_ ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3-2|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4 28.486842064014134 0.1687311288560894 3 {I|L}PPPS{I|L} 6 3 47.172 0.0 0.0 5.0858 0.0 0.0 0.0 320.1339205377563 320.1339205377563 26.22994718840225 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PPPS{I|L} 5.0858 - 531 + 1 1.585 186186.6 1.0 4811 5296 10093 HBL1_DMSO_200M_050219_1,10109 HBL1_DMSO_200M_050219_1,10109,LPPPSPAHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10110 52.824 800.0 84208.0 25 0 16700.0 -1 0 46 1099.788800994873 3296.34457358482 3 1100.461108386517 MULTI CID FTMS 0 0 0 10093 158329.75 1.0 0 0.0 17 3 E 1 -1 5.4846 0.0 0.0 0.16638 0.0 0.0 2640.115217657848 524.1630953424436 3164.278313000292 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16638 - 17 + 1 1.585 63391.8 0.8700000047683716 4812 5296 10093 HBL1_DMSO_200M_050219_1,10110 HBL1_DMSO_200M_050219_1,10110, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10111 52.837 712.0 77672.0 25 0 6045.8 + 4100 DANSRTSQLSI 11 100 596.3046858782461 0 596.3051025271416 PEAK CID FTMS 0 0 0 10093 138167.96875 1.0 0 0.0 18 Unmodified _DANSRTSQLSI_ ENSG00000095015|ENST00000399503|MAP3K1 30.7034409873982 0.2208360222321843 3 S{I|L}Q 3 9 24.253 0.0 0.0 2.037 0.0 0.0 131.09452693051713 728.2977999322874 859.3923268628046 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 S{I|L}Q 2.037 - 13 + 1 1.585 46034.9 1.0 4813 5296 10093 HBL1_DMSO_200M_050219_1,10111 HBL1_DMSO_200M_050219_1,10111,DANSRTSQLSI False True DANSRTSQLSI 52.836834 596.305102527142 358007.0 10093.0 ENSG00000095015|ENST00000399503|MAP3K1 3.742331584294637 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10112 52.85 766.0 150810.0 25 0 6893.8 + -1 VEMACLHGFV 10 179 589.771785071062 1177.529017208924 2 589.8064453005791 MULTI CID FTMS 0 0 0 -1 0 19 Carbamidomethyl (C),Oxidation (M) _VEM(Oxidation (M))AC(Carbamidomethyl (C))LHGFV_ REV__ENSG00000130052|ENST00000374599|STARD8;REV__nc|ENSG00000130052|Q92502|STARD8 11.640296217721598 0.652229146672156 3 {[QS]|[NT]}S[R{I|L}]C(Carbamidomethyl (C))TV 8 -1 23.349 0.0 0.0 1.9829 0.0 0.0 0.0 243.03118941034896 243.03118941034896 11.179648904515297 0.0 0.0 0.0 0 0.0 0.585026652029182 0.6694451763165201 0.4456290139465234 {[QS]|[NT]}S[R{I|L}]C(Carbamidomethyl (C))TV 1.9829 - 845 1 1.585 87856.1 1.0 4814 5296 10093 HBL1_DMSO_200M_050219_1,10112 HBL1_DMSO_200M_050219_1,10112,VEMACLHGFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10113 52.865 774.0 327900.0 25 0 43454.0 + 3151 AVRTERCSFS 10 218 578.2813924311727 1154.5482319291452 2 578.2811157107353 MULTI CID FTMS 0 0 0 10093 98611.828125 0.0498580924362312 -15 1.439605712890625 20 Unmodified _AVRTERCSFS_ REV__ENSG00000165323|ENST00000525166|FAT3;REV__nc|ENSG00000165323|Q8TDW7-2|FAT3;REV__nc|ENSG00000165323|Q8TDW7|FAT3 9.38312468134398 0.6832340498775793 3 {[VA]|[{I|L}G]}WPAPP 7 -1 20.996 0.0 0.0 1.8185 0.0 0.0 0.0 433.1477726618962 433.1477726618962 0.1754566749118566 0.0 0.0 0.0 0 0.1822333069283654 1.5228787452803376 0.0 0.0 {[VA]|[{I|L}G]}WPAPP 1.8185 - 2260 1 1.585 185600.0 1.0 4815 5296 10093 HBL1_DMSO_200M_050219_1,10113 HBL1_DMSO_200M_050219_1,10113,AVRTERCSFS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10115 52.869 6.6 5395100.0 25 0 1292300.0 + 5039 DGYAVDRAI 9 59 490.24563771393485 978.4767224946696 2 490.2460815310478 MULTI CID FTMS 0 0 0 10114 5726476.0 0.237758154372846 1 -0.0814094543457031 1 Unmodified _DGYAVDRAI_ ENSG00000104824|ENST00000221419|HNRNPL;ENST00000595164.5_1_19:39327364-39331218:-|nuORF;ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;ENST00000601664.1_1_19:39329532-39330816:-|nuORF;nc|ENSG00000104824|P14866-2|HNRNPL 15.248480904072842 0.4239247793462406 3 [DG]YA 4 5 25.608 0.0 0.0 2.6171 0.0 0.0 0.0 569.305371746876 569.305371746876 14.638787285696967 0.0 0.0 0.0 0 1.0 1.0457574905606752 0.0 0.0 + [DG]YA 2.6171 + + 20 1 1.569 32014.9 1.0 4816 5297 10114 HBL1_DMSO_200M_050219_1,10115 HBL1_DMSO_200M_050219_1,10115,DGYAVDRAI False True DGYAVDRAI 52.868894 490.246081531048 284766656.0 10114.0 ENST00000595443.5_1_19:39327988-39329682:-|nuORF;;ENST00000601664.1_1_19:39329532-39330816:-|nuORF;;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;;nc|ENSG00000104824|P14866-2|HNRNPL;;ENSG00000104824|ENST00000221419|HNRNPL;;ENST00000595164.5_1_19:39327364-39331218:-|nuORF 4.188480297724406 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10116 52.87 2.7 20619000.0 25 0 2479500.0 + 6143 DSYTPKVI 8 75 461.7476926100822 921.4808322869644 2 461.7479431033134 MULTI CID FTMS 0 0 0 10114 24595914.0 1.0 0 0.0 2 Unmodified _DSYTPKVI_ ENSG00000133872|ENST00000256255|SARAF;ENST00000517569.1_1_8:29931365-29940465:-|nuORF 64.23631603340823 0.116217441302575 3 {[DS]|[MA]|[CV]|TT}YTPKV{I|L} 8 0 + 42.599 0.0 0.0 4.6229 4.6229 83.982 0.0 0.0 0.0 5.484550065040281 9.719038900620989 5.484550065040281 9.719038900620989 0 1.066901560044258 0.0 0.5 0.0 + + {[DS]|[MA]|[CV]|TT}YTPKV{I|L};[KP]VTY{I|L}{[DS]|[MA]|[CV]|TT};[KP]TVY{I|L}{[DS]|[MA]|[CV]|TT};[TP]KVY{I|L}{[DS]|[MA]|[CV]|TT};[KP]V{I|L}[YT]{[DS]|[MA]|[CV]|TT};GG[{I|L}V]VY{I|L}{[DS]|[MA]|[CV]|TT} 4.6229;3.5682;3.1073;1.9771;1.4808;0.013385 +;-;-;-;-;- + 115 + 1 1.569 48171.9 1.0 4817 5297 10114 HBL1_DMSO_200M_050219_1,10116 HBL1_DMSO_200M_050219_1,10116,DSYTPKVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10117 52.871 14.0 4933800.0 25 0 761470.0 + 5243 DKEPLLRIP 9 65 360.88533721187406 1079.6341822358222 3 360.8851196169853 MULTI CID FTMS 0 0 0 10114 4191549.25 0.3821455430902215 3 -0.30255126953125 3 Unmodified _DKEPLLRIP_ REV__ENSG00000012232|ENST00000220562|EXTL3 17.11289562659939 0.3734572693229295 3 {I|L}PEDK{I|L} 6 -1 53.374 0.0 0.0 4.9437 0.0 0.0 0.0 381.2263582818969 381.2263582818969 18.76474477633149 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.4247425010840047 0.0 {I|L}PEDK{I|L} 4.9437 - 67 + 1 1.569 67584.2 1.0 4818 5297 10114 HBL1_DMSO_200M_050219_1,10117 HBL1_DMSO_200M_050219_1,10117,DKEPLLRIP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10118 52.872 28.0 2408000.0 25 0 456510.0 + 14789 ILDQKINEV 9 101 536.3062517803639 1070.5979506275278 2 536.3062621951103 MULTI CID FTMS 0 0 0 10114 2443153.25 0.6198834359863657 -1 0.16339111328125 4 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 53.832793166522166 0.0319663582346103 3 {I|L}{I|L}[{M(Oxidation (M))|F}V]N{I|L}DQ 8 6 64.029 0.0 0.0 5.9807 0.0 0.0 0.0 125.07253442935782 125.07253442935782 25.683922736495973 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.6747425010840047 {I|L}{I|L}[{M(Oxidation (M))|F}V]N{I|L}DQ 5.9807 - 1229 + 1 1.569 57526.9 1.0 4819 5297 10114 HBL1_DMSO_200M_050219_1,10118 HBL1_DMSO_200M_050219_1,10118,ILDQKINEV True True ILDQKINEV 52.87243 536.30626219511 23654838.0 10114.0 ENST00000446285.5_1_2:10584646-10585158:-|nuORF;;ENSG00000115758|ENST00000234111|ODC1 4.6968607902526855 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10119 52.874 44.0 1127400.0 25 0 133890.0 + 16747 KFKEVGEAF 9 81 527.7821243258659 1053.5496957185317 2 527.7820922732353 MULTI CID FTMS 0 0 0 10114 1409225.0 0.6733540981407417 -1 0.16339111328125 5 Unmodified _KFKEVGEAF_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 63.960520009940105 0.0238892913700936 3 {[DA]|[EG]}VEK{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 9 6 + 59.632 0.0 0.0 5.6601 5.6601 82.492 0.0 0.0 0.0 4.6600041356691335 32.219491196484526 4.6600041356691335 5.159267048260183 0 1.0 0.958607314841775 0.3494850021680094 0.75 {[DA]|[EG]}VEK{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{NN|[MP]|[D{I|L}]|[EV]}GEA{M(Oxidation (M))|F};{[DA]|[EG]}VEKA{M(Oxidation (M))|F}K{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{NN|[MP]|[D{I|L}]|[EV]}WA{M(Oxidation (M))|F};{[DA]|[EG]}VEK{M(Oxidation (M))|F}AK{M(Oxidation (M))|F};{[DA]|[EG]}V[KT]V{[CT]|[{M(Oxidation (M))|F}G]}A{M(Oxidation (M))|F};{[CP]|[EA]}[DV]K{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};[HV]K{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}HK{M(Oxidation (M))|F};{[CP]|[EA]}[DV]KA{M(Oxidation (M))|F}K{M(Oxidation (M))|F};K{M(Oxidation (M))|F}{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.6601;5.1704;4.998;4.8413;4.5451;4.1493;3.3482;3.0452;2.686;2.5548 -;+;-;-;-;-;-;-;-;- + 351 1 1.569 44242.7 1.0 4820 5297 10114 HBL1_DMSO_200M_050219_1,10119 HBL1_DMSO_200M_050219_1,10119,KFKEVGEAF True True KFKEVGEAF 52.873655 527.782092273235 14611683.0 10114.0 ENSG00000168259|ENST00000457167|DNAJC7;;nc|ENSG00000168259|Q99615-2|DNAJC7 5.528315385182698 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10120 52.875 66.0 1133600.0 25 0 180520.0 + 6529 EALEAARI 8 91 436.7456070831507 871.4766612331014 2 436.7456542849541 MULTI CID FTMS 0 0 0 10114 1177351.125 1.0 0 0.0 6 Unmodified _EALEAARI_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 54.773552608820026 0.1167943196628344 3 {[CP]|[EA]}{I|L}EAAR{I|L} 8 0 + 46.407 0.0 0.0 5.3251 5.3251 88.992 0.0 0.0 0.0 35.569779421537746 9.451687839877891 9.451687839877891 27.890405928137696 0 0.7302046884880937 0.0 0.4247425010840047 0.2742275032520141 + + {[CP]|[EA]}{I|L}EAAR{I|L};{[CP]|[EA]}{I|L}{I|L}[WQ]{I|L} 5.3251;2.1248 +;- + 107 + 1 1.569 67261.7 1.0 4821 5297 10114 HBL1_DMSO_200M_050219_1,10120 HBL1_DMSO_200M_050219_1,10120,EALEAARI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10121 52.877 83.0 928010.0 25 0 128970.0 + 18509 KYQAQDNFM 9 105 572.7579684805963 1143.5013840279926 2 572.7585327029228 MULTI CID FTMS 0 0 0 10114 1137564.625 0.4291729439468784 -1 0.16339111328125 7 Unmodified _KYQAQDNFM_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 88.95385435242217 0.0153473310052057 3 [YK]QAQDN{M(Oxidation (M))|F}M 9 0 + 90.142 0.0 0.0 7.883 7.883 92.104 0.0 0.0 0.0 9.074547923943925 16.478174818886373 9.074547923943925 9.074547923943925 0 0.805462187404089 0.958607314841775 0.3807196863200844 1.885151878060192 + + [YK]QAQDN{M(Oxidation (M))|F}M;{[HG]|PP}PQAQDN{M(Oxidation (M))|F}M;[YK][AG]AQDN{M(Oxidation (M))|F}M;[YK]QA[AG]DN{M(Oxidation (M))|F}M;[YK]QAQDGG{M(Oxidation (M))|F}M;[YQ]KAQDN{M(Oxidation (M))|F}M;[AG]YKAQDN{M(Oxidation (M))|F}M;{[HG]|PP}PQAQDGG{M(Oxidation (M))|F}M;{[HG]|PP}PQA[AG]DN{M(Oxidation (M))|F}M;[YK][AG]A[AG]DN{M(Oxidation (M))|F}M 7.883;7.0894;7.0778;7.0778;7.0778;6.8907;6.8077;6.288;6.288;6.2763 +;-;-;-;-;-;-;-;-;- + 670 1 1.569 64523.0 1.0 4822 5297 10114 HBL1_DMSO_200M_050219_1,10121 HBL1_DMSO_200M_050219_1,10121,KYQAQDNFM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10122 52.879 78.0 1106300.0 25 0 99438.0 + 24254 MAPLVRKI 8 92 309.86542743505333 926.57445290536 3 309.8650390505791 MULTI CID FTMS 0 0 0 10114 981955.8125 1.0 0 0.0 8 Unmodified _MAPLVRKI_ ENSG00000169684|ENST00000299565|CHRNA5 30.22481116460888 0.4082965392918993 3 MAP{I|L}V[RK]{I|L} 8 0 + 66.584 0.0 0.0 7.1861 7.1861 84.235 0.0 0.0 0.0 55.746718181953455 5.130523423301426 5.130523423301426 3.0102999566398125 0 0.3494850021680094 2.0 0.0 0.4247425010840047 + + MAP{I|L}V[RK]{I|L};MA{I|L}PV[RK]{I|L};M{I|L}APV[RK]{I|L} 7.1861;6.8612;3.3522 +;-;- + 89 + 1 1.569 76600.3 1.0 4823 5297 10114 HBL1_DMSO_200M_050219_1,10122 HBL1_DMSO_200M_050219_1,10122,MAPLVRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10123 52.88 52.0 1022000.0 25 0 291420.0 9466 FLDEKQKF 8 73 352.1906015987657 1053.549975396497 3 352.1903869509697 MULTI CID FTMS 0 0 0 10114 788315.4375 0.6859011379401704 -1 0.16339111328125 9 Unmodified _FLDEKQKF_ ENST00000479830.2_1_5:68339466-68339598:-|nuORF 4.75600775471527 0.7954636275367004 3 {[DA]|[EG]}A 3 7 15.519 0.0 0.0 1.473 0.0 0.0 0.0 793.4247672268283 793.4247672268283 0.0346935159350962 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 {[DA]|[EG]}A 1.473 - 38 1 1.569 49830.7 1.0 4824 5297 10114 HBL1_DMSO_200M_050219_1,10123 HBL1_DMSO_200M_050219_1,10123,FLDEKQKF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10124 52.883 108.0 652080.0 25 0 34595.0 + 31877 RTLDSVSQI 9 100 509.7783629833229 1017.5421730334458 2 509.7788574099541 MULTI CID FTMS 0 0 0 10114 715319.3125 0.5838113535510542 -1 0.16339111328125 10 Unmodified _RTLDSVSQI_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B 41.95555342248728 0.0647214845423414 3 {[QN]|[E{I|L}]|[KN]}SRSVSQ{I|L} 9 4 + 71.002 0.0 0.0 6.9778 6.9778 90.73 0.0 0.0 0.0 10.726825097560422 16.478174818886373 10.726825097560422 9.208187539523747 0 0.6421590589602533 0.744727494896694 1.1549471895720984 0.0 {[QN]|[E{I|L}]|[KN]}SRSVSQ{I|L};{[QN]|[E{I|L}]|[KN]}S[VG]SVSQ{I|L};{[QN]|[E{I|L}]|[KN]}SRSVS[AG]{I|L};[{I|L}T]DRSVSQ{I|L};{[QN]|[E{I|L}]|[KN]}S[VG]SVS[AG]{I|L};[{I|L}T]D[VG]SVSQ{I|L};[{I|L}T]DRSVS[AG]{I|L};{[QN]|[E{I|L}]|[KN]}SRS[WK]{I|L};{[QN]|[E{I|L}]|[KN]}SRS[WQ]{I|L};[{I|L}T]D[VG]SVS[AG]{I|L} 6.9778;6.0728;6.0728;5.9236;5.1722;5.0186;5.0186;4.3374;4.3374;4.118 -;-;-;-;-;-;-;-;-;- 458 1 1.569 61448.9 1.0 4825 5297 10114 HBL1_DMSO_200M_050219_1,10124 HBL1_DMSO_200M_050219_1,10124,RTLDSVSQI True True RTLDSVSQI 52.882538 509.778857409954 19346282.0 10114.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 6.075692017873128 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10125 52.887 238.0 590190.0 25 0 129190.0 + 26828 PARAGPKP 8 125 397.2376141781166 792.4606754230332 2 397.2373535037041 MULTI CID FTMS 0 0 0 10114 593499.125 0.726034277339845 -1 0.16339111328125 11 Unmodified _PARAGPKP_ REV__nc|ENSG00000135625|Q05215|EGR4 9.347437153973935 0.7675937258251505 3 [PA]S{I|L}{I|L}HR 7 -1 [PA]S + + 51.52 9.2338 3.6194 6.5013 6.5013 60.622 0.0 0.0 0.0 0.0 41.0353568582504 0.0 0.0 0 0.8807196863200843 0.0 0.0 1.0774509799928715 [PA]S{I|L}{I|L}HR 6.5013 - 80 + 1 1.569 112189.1 1.0 4826 5297 10114 HBL1_DMSO_200M_050219_1,10125 HBL1_DMSO_200M_050219_1,10125,PARAGPKP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10126 52.89 151.0 719720.0 25 0 58289.0 + 32631 SAYLTQQV 8 119 455.2375078858064 908.4604628384128 2 455.2378112673759 MULTI CID FTMS 0 0 0 10114 575888.25 0.4369763186479029 -1 0.16339111328125 12 Unmodified _SAYLTQQV_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA;nc|ENSG00000115970|Q6YHU6-6|THADA 46.92087301778293 0.1537303740847981 3 {[SA]|[TG]}Y{I|L}T 5 3 36.172 0.0 0.0 3.9817 0.0 0.0 0.0 370.17322259763927 370.17322259763927 18.32238169348222 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.75 0.0 + {[SA]|[TG]}Y{I|L}T 3.9817 + + 518 1 1.569 87090.5 1.0 4827 5297 10114 HBL1_DMSO_200M_050219_1,10126 HBL1_DMSO_200M_050219_1,10126,SAYLTQQV False True SAYLTQQV 52.88998 455.237811267376 5764444.5 10114.0 ENSG00000115970|ENST00000405975|THADA;;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;;nc|ENSG00000115970|Q6YHU6-2|THADA;;nc|ENSG00000115970|Q6YHU6-6|THADA;;nc|ENSG00000115970|Q6YHU6-5|THADA;;nc|ENSG00000115970|Q6YHU6-3|THADA 5.483913580576579 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10127 52.892 86.0 1063000.0 25 0 122390.0 43684 YAWMDATL 8 92 485.718978518578 969.423404103956 2 485.7189208865166 MULTI CID FTMS 0 0 0 10114 508079.875 1.0 0 0.0 13 Unmodified _YAWMDATL_ ENST00000434334.1_1_2:182559249-182559624:+|nuORF 15.768221252438446 0.6779680726941459 3 T{I|L} 2 6 14.508 0.0 0.0 1.4966 0.0 0.0 737.2806714152825 0.0 737.2806714152825 0.0 0.8069776038905729 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + T{I|L} 1.4966 + + 130 + 1 1.569 76432.0 1.0 4828 5297 10114 HBL1_DMSO_200M_050219_1,10127 HBL1_DMSO_200M_050219_1,10127,YAWMDATL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10128 52.894 102.0 493830.0 25 0 71477.0 + 33615 SIQFSSALV 9 84 476.26290695283984 0 476.2630187869072 PEAK CID FTMS 0 0 0 10114 409070.25 1.0 0 0.0 14 Unmodified _SIQFSSALV_ ENSG00000198715|ENST00000362007|GLMP;ENST00000479084.1_1_1:156264456-156264780:-|nuORF;nc|ENSG00000198715|Q8WWB7-2|GLMP 29.081581746732265 0.1187435359889091 3 A{M(Oxidation (M))|F}SQE 5 7 35.918 0.0 0.0 3.7788 0.0 0.0 317.20059998495043 68.05146204166249 385.2520620266129 0.0 0.0 0.0 0.0 0 0.5 0.0 0.6989700043360187 0.3494850021680094 A{M(Oxidation (M))|F}SQE 3.7788 - 75 + 1 1.569 48072.0 1.0 4829 5297 10114 HBL1_DMSO_200M_050219_1,10128 HBL1_DMSO_200M_050219_1,10128,SIQFSSALV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10129 52.899 286.0 281360.0 25 0 29610.0 + 6114 DSVKVMTV 8 121 439.73633619437305 877.4581194555461 2 439.7358886599541 MULTI CID FTMS 0 0 0 10114 367565.6875 0.5319477966643789 1 -0.0814094543457031 15 Unmodified _DSVKVMTV_ ENSG00000131368|ENST00000253686|MRPS25;nc|ENSG00000131368|P82663-2|MRPS25;nc|ENSG00000131368|P82663-3|MRPS25 28.486842064014134 0.4448922141344407 3 [HA]T{I|L}{I|L} 5 8 14.966 0.0 0.0 1.7056 0.0 0.0 0.0 339.1229653886318 339.1229653886318 -0.0970469684341424 0.0 -0.0970469684341424 0.0 0 0.0 0.0 0.6549471895720984 0.0 [HA]T{I|L}{I|L} 1.7056 - 151 1 1.569 66911.8 1.0 4830 5297 10114 HBL1_DMSO_200M_050219_1,10129 HBL1_DMSO_200M_050219_1,10129,DSVKVMTV False True DSVKVMTV 52.899338 439.735888659954 4502772.0 10114.0 ENSG00000131368|ENST00000253686|MRPS25;;nc|ENSG00000131368|P82663-3|MRPS25;;nc|ENSG00000131368|P82663-2|MRPS25 4.674786567687988 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10130 52.909 568.0 448430.0 25 0 52464.0 + 24255 MAPLVRKI 8 198 464.2941423821507 0 464.2943298220634 PEAK CID FTMS 0 0 0 10114 343021.125 1.0 0 0.0 16 Unmodified _MAPLVRKI_ ENSG00000169684|ENST00000299565|CHRNA5 30.22481116460888 0.2280668331718824 3 AP{I|L}V 4 4 24.02 0.0 0.0 2.5923 0.0 0.0 131.0387624352632 412.26777063541255 543.3065330706758 0.0 0.0 0.0 0.0 0 0.6307196863200843 0.0 0.0 0.0 + AP{I|L}V 2.5923 + + 73 + 1 1.569 195191.9 1.0 4831 5297 10114 HBL1_DMSO_200M_050219_1,10130 HBL1_DMSO_200M_050219_1,10130,MAPLVRKI False True MAPLVRKI 52.909288 464.294329822063 7889330.25 10114.0 ENSG00000169684|ENST00000299565|CHRNA5 3.0061402320861816 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10131 52.919 553.0 194600.0 25 0 23582.0 + -1 DQLIQGCEYM 10 110 628.7660987370305 1255.5176445408608 2 628.7666503787041 MULTI CID FTMS 0 0 0 10114 307074.40625 1.0 0 0.0 17 Carbamidomethyl (C) _DQLIQGC(Carbamidomethyl (C))EYM_ REV__ENST00000431294.5_1_1:63786852-63789241:-|nuORF 4.897010918128616 0.7039849508293987 3 {[TV]|[{I|L}S]}A[TP]E{I|L}D 8 -1 27.973 0.0 0.0 2.228 0.0 0.0 0.0 426.0756542633772 426.0756542633772 7.003766125365676 0.0 0.0 0.0 0 1.1989700043360187 0.721246399047171 0.5941876774005248 0.0 {[TV]|[{I|L}S]}A[TP]E{I|L}D 2.228 - 162 1 1.569 85208.3 1.0 4832 5297 10114 HBL1_DMSO_200M_050219_1,10131 HBL1_DMSO_200M_050219_1,10131,DQLIQGCEYM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10132 52.924 246.0 320770.0 25 0 20794.0 + 4791 DENKYTCNV 9 143 543.2306744007203 1084.4467958682403 2 543.2316161990166 MULTI CID FTMS 0 0 0 10114 283781.71875 1.0 0 0.0 18 Unmodified _DENKYTCNV_ REV__ENSG00000259207|ENST00000559488|ITGB3;REV__nc|ENSG00000259207|P05106-2|ITGB3;REV__nc|ENSG00000259207|P05106-3|ITGB3 12.531546534597751 0.4974689918368763 3 QVV{M(Oxidation (M))|F}Y 5 -1 33.928 0.0 0.0 3.1286 0.0 0.0 430.10861335046553 0.0 430.10861335046553 0.0 9.596375413260317 0.0 0.0 0 0.5 0.0 0.0 0.0 QVV{M(Oxidation (M))|F}Y 3.1286 - 1312 + 1 1.569 66017.2 1.0 4833 5297 10114 HBL1_DMSO_200M_050219_1,10132 HBL1_DMSO_200M_050219_1,10132,DENKYTCNV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10133 52.934 606.0 288420.0 25 0 33161.0 -1 KCMKSFRQSL 10 121 650.8279386073324 0 650.8278686404228 PEAK CID FTMS 0 0 0 10114 258393.078125 1.0 0 0.0 19 Carbamidomethyl (C),Oxidation (M) _KC(Carbamidomethyl (C))M(Oxidation (M))KSFRQSL_ ENSG00000167981|ENST00000301744|ZNF597 13.042465956692816 0.351733747982019 3 VA[{M(Oxidation (M))|F}E]K 5 -1 21.466 0.0 0.0 1.6517 0.0 0.0 203.07700827190143 519.2479952447874 722.3250035166889 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 VA[{M(Oxidation (M))|F}E]K 1.6517 - 157 + 1 1.569 132600.8 1.0 4834 5297 10114 HBL1_DMSO_200M_050219_1,10133 HBL1_DMSO_200M_050219_1,10133,KCMKSFRQSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10134 52.946 614.0 204380.0 25 0 18742.0 23831 LVGGVLVEQCP 11 144 557.3018245654499 0 557.3029052615166 PEAK CID FTMS 0 0 0 10114 235540.421875 0.7089858219644792 -2 0.2435111999511718 20 Unmodified _LVGGVLVEQCP_ ENSG00000104883|ENST00000221480|PEX11G 10.823927491677226 0.4426539792967427 3 TPK 3 11 12.422 0.0 0.0 1.1165 0.0 0.0 556.2298565510185 227.1407259576781 783.3705825086967 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.2614393726401688 TPK 1.1165 - 160 + 1 1.569 98081.0 1.0 4835 5297 10114 HBL1_DMSO_200M_050219_1,10134 HBL1_DMSO_200M_050219_1,10134,LVGGVLVEQCP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10136 52.95 2.4 14460000.0 25 0 1185600.0 + 32190 RVVDELDNQM 10 56 609.7926304810543 1217.5707080289085 2 609.7936279177666 MULTI CID FTMS 0 0 0 10135 20113674.0 0.6146138687053004 1 -0.1191444396972656 1 Unmodified _RVVDELDNQM_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 42.312485326615175 0.1331477410672653 3 [RV]VDE{I|L}DNQM 10 0 + 71.235 0.0 0.0 5.8506 5.8506 86.698 0.0 0.0 0.0 2.7545373444029053 67.74018161280694 2.7545373444029053 9.164539485499256 0 0.805462187404089 0.0 0.4247425010840047 0.3807196863200844 + + [RV]VDE{I|L}DNQM;[RV]VDE{I|L}DGGQM;[RV]VDE{I|L}DN[AG]M;[RV]VDE{I|L}DGG[AG]M 5.8506;5.0979;5.0979;4.3482 +;-;-;- + 77 1 1.569 35514.0 1.0 4836 5298 10135 HBL1_DMSO_200M_050219_1,10136 HBL1_DMSO_200M_050219_1,10136,RVVDELDNQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10137 52.951 9.8 4703100.0 25 0 593820.0 23850 LVIDNVTRFDS 11 59 639.8374982544077 1277.660443575615 2 639.8376953005791 MULTI CID FTMS 0 0 0 10135 5082697.5 0.8150457614576829 1 -0.1191444396972656 2 Unmodified _LVIDNVTRFDS_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN 10.799506525563784 0.8105043987015127 3 [TP][VS]VAVT 8 9 29.646 0.0 0.0 2.3204 0.0 0.0 0.0 520.2127866754778 520.2127866754778 1.2029720289687162 0.0 0.0 0.0 0 0.0 0.0 2.2302046884880937 0.0 [TP][VS]VAVT 2.3204 - 145 1 1.569 44556.5 1.0 4837 5298 10135 HBL1_DMSO_200M_050219_1,10137 HBL1_DMSO_200M_050219_1,10137,LVIDNVTRFDS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10138 52.953 12.0 6226800.0 25 0 526790.0 + 2150 APYPTPAQV 9 97 472.24781435238816 942.4810757715765 2 472.2478515505791 MULTI CID FTMS 0 0 0 10135 4699820.0 0.9520491211338488 -2 0.2448005676269531 3 Unmodified _APYPTPAQV_ ENSG00000198807|ENST00000361487|PAX9 93.88341677533236 0.0134066622201488 3 [PA]TPYPAQV 9 2 + 69.637 0.0 0.0 7.3887 7.3887 90.82 0.0 0.0 0.0 8.961280356782382 9.577570906191896 8.961280356782382 8.961280356782382 0 1.0044321917401078 1.2218487496163564 1.9291746928241125 0.0 [PA]TPYPAQV;[TP]APYPAQV;[PA]YPTPAQV;[TP]YPAPAQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TPAPAQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APTPAQV;{NN|[MP]|[D{I|L}]|[EV]}{[ET]|[MV]}APAQV;[AG]V[NS]TPAQV;[PA]TPA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QV;[TP]YPPAAQV 7.3887;6.4378;6.249;5.7204;5.4777;5.0554;4.6434;4.5622;4.2779;4.227 -;-;+;-;-;-;-;-;-;- + 1243 1 1.569 65410.4 1.0 4838 5298 10135 HBL1_DMSO_200M_050219_1,10138 HBL1_DMSO_200M_050219_1,10138,APYPTPAQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10139 52.954 13.0 3309000.0 25 0 253930.0 + 21893 LPPEYASTV 9 74 488.7531214727471 975.4916900122944 2 488.7531005740166 MULTI CID FTMS 0 0 0 10135 4514235.5 1.0 0 0.0 4 Unmodified _LPPEYASTV_ ENSG00000178913|ENST00000313368|TAF7 28.486842064014134 0.1687311288560894 3 [EP]PYA{I|L}{[WT]|[RM]} 8 4 + 28.416 0.0 0.0 2.913 2.913 50.045 0.0 0.0 0.0 2.04119982655925 6.065170027322484 2.04119982655925 0.0 0 0.0 0.0 0.0 0.0 [EP]PYA{I|L}{[WT]|[RM]};[EP]YPA{I|L}{[WT]|[RM]};{[HG]|PP}EYA{I|L}{[WT]|[RM]};[EP]YP{I|L}A{[WT]|[RM]};[EP]YAP{I|L}{[WT]|[RM]};[EP]PY{I|L}A{[WT]|[RM]};[{I|L}P][EP]YA{[WT]|[RM]};{[HG]|PP}EY{I|L}A{[WT]|[RM]};[EP]P{I|L}YA{[WT]|[RM]};{[HG]|PP}E{I|L}YA{[WT]|[RM]} 2.913;2.913;2.7038;2.6044;2.6044;2.6044;2.552;2.3952;1.8879;1.6787 -;-;-;-;-;-;-;-;-;- 162 1 1.569 36273.3 1.0 4839 5298 10135 HBL1_DMSO_200M_050219_1,10139 HBL1_DMSO_200M_050219_1,10139,LPPEYASTV False True LPPEYASTV 52.95384 488.753100574017 414491936.0 10135.0 ENSG00000178913|ENST00000313368|TAF7 5.238279422124227 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10140 52.955 15.0 3965800.0 25 0 660230.0 + 22014 LPPPPPPAM 9 77 458.7515933437354 915.4886337542708 2 458.7518188357353 MULTI CID FTMS 0 0 0 10135 3542120.0 0.5061107371927566 4 -0.4434776306152344 5 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 3 [{I|L}P]PPPP 6 3 47.159 0.0 0.0 5.1512 0.0 0.0 0.0 314.1172397226699 314.1172397226699 13.3804562952784 0.0 0.0 0.0 0 1.555462187404089 1.5228787452803376 0.0 0.0 + [{I|L}P]PPPP 5.1512 + + 321 1 1.569 55291.6 1.0 4840 5298 10135 HBL1_DMSO_200M_050219_1,10140 HBL1_DMSO_200M_050219_1,10140,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10141 52.957 68.0 1158100.0 25 0 124630.0 5699 DPITRRTKG 9 90 348.5381974441132 1042.5927629325397 3 348.5377990603447 MULTI CID FTMS 0 0 0 10135 882936.5 0.460086753173192 1 -0.1191444396972656 6 Unmodified _DPITRRTKG_ ENST00000405201.5_1_12:124808981-124809239:-|nuORF 5.731851221503515 0.7145881442174411 3 DPYRPV 6 6 52.74 0.0 0.0 5.0586 0.0 0.0 0.0 312.20420252017817 312.20420252017817 41.77108148272637 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 DPYRPV 5.0586 - 108 + 1 1.569 76298.4 1.0 4841 5298 10135 HBL1_DMSO_200M_050219_1,10141 HBL1_DMSO_200M_050219_1,10141,DPITRRTKG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10142 52.958 67.0 1077500.0 25 0 172630.0 + 21273 LPEDKPRLI 9 84 540.824141441904 1079.633729950608 2 540.8239623904228 MULTI CID FTMS 0 0 0 10135 560127.125 0.149165362875575 4 -0.4434776306152344 7 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 36.12702656103203 0.0967173616627612 3 {I|L}PEDK 5 4 62.691 0.0 0.0 5.8067 0.0 0.0 0.0 494.3101077895017 494.3101077895017 43.99288766643714 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.4247425010840047 0.0 + {I|L}PEDK 5.8067 + + 160 + 1 1.569 66752.3 1.0 4842 5298 10135 HBL1_DMSO_200M_050219_1,10142 HBL1_DMSO_200M_050219_1,10142,LPEDKPRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10143 52.961 108.0 792190.0 25 0 147520.0 + 10846 GAASVKAQA 9 64 401.72346458837575 801.4323762435515 2 401.7231323122978 MULTI CID FTMS 0 0 0 10135 502755.0 0.2075741195321897 -2 0.2448005676269531 8 Unmodified _GAASVKAQA_ REV__ENST00000559123.5_1_14:24605441-24606207:+|nuORF 4.3292370932331545 0.7635526921153418 3 {I|L} 1 -1 11.109 0.0 0.0 1.3862 0.0 0.0 670.3374951173781 0.0 670.3374951173781 0.0 3.252574989159953 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3862 - 21 + 1 1.569 74348.9 1.0 4843 5298 10135 HBL1_DMSO_200M_050219_1,10143 HBL1_DMSO_200M_050219_1,10143,GAASVKAQA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10144 52.969 491.0 349910.0 25 0 41009.0 + 5957 DQLCISFHHFP 11 121 672.3144265477721 1342.614300162344 2 672.3148681521416 MULTI CID FTMS 0 0 0 10135 371750.46875 0.522355752975571 4 -0.4434776306152344 9 Unmodified _DQLCISFHHFP_ REV__ENST00000556103.1_1_14:23946657-23947232:+|nuORF 20.41453444215458 0.6105011870913812 3 {NN|[MP]|[D{I|L}]|[EV]}GAS{M(Oxidation (M))|F}SQ{I|L} 9 -1 47.801 0.0 0.0 3.5603 0.0 0.0 0.0 421.14994369882646 421.14994369882646 11.8214551066853 0.0 0.0 0.0 0 0.0 0.0 2.9291746928241125 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}GAS{M(Oxidation (M))|F}SQ{I|L} 3.5603 - 1900 1 1.569 127288.3 1.0 4844 5298 10135 HBL1_DMSO_200M_050219_1,10144 HBL1_DMSO_200M_050219_1,10144,DQLCISFHHFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10145 52.973 222.0 444320.0 25 0 42944.0 + 25101 MPYHIQRTI 9 117 386.87459243110845 1157.6019478935254 3 386.8743469119072 MULTI CID FTMS 0 0 0 10135 367611.84375 1.0 0 0.0 10 Unmodified _MPYHIQRTI_ ENSG00000173198|ENST00000373304|CYSLTR1 18.373094154950223 0.3393451798331396 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KK{I|L}HYP 8 7 46.362 0.0 0.0 4.005 0.0 0.0 0.0 128.0143983658758 128.0143983658758 22.98455006504028 0.0 0.0 0.0 0 0.0 2.0 0.4489700043360188 0.4247425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KK{I|L}HYP 4.005 - 377 1 1.569 82273.2 1.0 4845 5298 10135 HBL1_DMSO_200M_050219_1,10145 HBL1_DMSO_200M_050219_1,10145,MPYHIQRTI False True MPYHIQRTI 52.9734 386.874346911907 2422571.5 10135.0 ENSG00000173198|ENST00000373304|CYSLTR1 5.051448980967204 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10146 52.983 537.0 342670.0 25 0 35303.0 + 16106 ITSPELRSV 9 170 501.2842980175503 1000.5540431019008 2 501.2848693728447 MULTI CID FTMS 0 0 0 10135 334361.1875 1.0 0 0.0 11 Unmodified _ITSPELRSV_ ENSG00000132109|ENST00000254436|TRIM21;nc|ENSG00000132109|P19474-2|TRIM21 40.23920728925047 0.0741434193262949 3 {I|L}TSPE{I|L}RSV 9 0 + 77.617 0.0 0.0 7.7574 7.7574 93.629 0.0 0.0 0.0 61.01464731531564 7.791681396005998 7.791681396005998 9.815534464597704 0 0.3807196863200844 2.0 0.4247425010840047 0.0 + + {I|L}TSPE{I|L}RSV;{I|L}TSPT{[WT]|[RM]}PV;{I|L}TSPE[Q{I|L}]T{I|L};{I|L}TSPE[Q{I|L}]{I|L}T;{I|L}TSPE[RV]TV;{I|L}TSPE[RV]S{I|L};{I|L}TSPE[RV]VT;[{I|L}T]{[WT]|[RM]}TPSPV;{I|L}T{[RE]|[WV]}{[WT]|[RM]}PV;{I|L}T[R{M(Oxidation (M))|F}][HK]TV 7.7574;6.7764;6.7242;6.4908;6.2837;5.9565;5.7231;5.1249;4.5558;3.1605 +;-;-;-;-;-;-;-;-;- + 1031 + 1 1.569 139525.3 1.0 4846 5298 10135 HBL1_DMSO_200M_050219_1,10146 HBL1_DMSO_200M_050219_1,10146,ITSPELRSV True True ITSPELRSV 52.982823 501.284869372845 4154063.5 10135.0 ENSG00000132109|ENST00000254436|TRIM21;;nc|ENSG00000132109|P19474-2|TRIM21 6.086408774058024 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10147 52.984 64.0 719560.0 25 0 66127.0 42296 VSSNCDILM 9 72 491.2219014427378 980.4292499522757 2 491.2215453982353 MULTI CID FTMS 0 0 0 10135 306565.28125 1.0 0 0.0 12 Unmodified _VSSNCDILM_ ENST00000415811.7_2_17:45012600-45012663:+|nuORF 7.289230182591677 0.6602208344931196 3 V 1 8 11.42 0.0 0.0 1.1648 0.0 0.0 863.349574209403 0.0 863.349574209403 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1648 + + 25 + 1 1.569 42230.7 1.0 4847 5298 10135 HBL1_DMSO_200M_050219_1,10147 HBL1_DMSO_200M_050219_1,10147,VSSNCDILM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10148 52.994 544.0 169530.0 25 0 15077.0 + 9038 DTNADKQLSFEE 12 130 698.8153362105442 0 698.8151733279228 PEAK CID FTMS 0 0 0 10135 314090.53125 1.0 0 0.0 13 Unmodified _FECVFFQGKYE_ ENSG00000163220|ENST00000368738|S100A9 27.628801355627647 0.2572500445580473 3 {M(Oxidation (M))|F}S{I|L}[KQ]DAN 8 9 70.421 0.0 0.0 5.0459 0.0 0.0 276.10170419188177 213.0521181695922 489.153822361474 0.0 0.0 0.0 0.0 0 2.1861818737241734 0.0 1.274227503252014 1.4916440611282626 {M(Oxidation (M))|F}S{I|L}[KQ]DAN 5.0459 - 1291 + 1 1.569 74175.8 1.0 4848 5298 10135 HBL1_DMSO_200M_050219_1,10148 HBL1_DMSO_200M_050219_1,10148,FECVFFQGKYE False False DTNADKQLSFEE 52.993933 698.815173327923 2251411.0 10135.0 ENSG00000163220|ENST00000368738|S100A9 9.802517573038736 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10149 53.003 544.0 355800.0 25 0 43304.0 + + 42105 RVLDTSDAL 9 152 495.2667299728767 988.5189070125532 2 495.2662231326103 MULTI CID FTMS 0 0 0 10135 326505.34375 1.0 0 0.0 14 Unmodified _VRLDTSDAL_ ENSG00000115760|ENST00000421745|BIRC6 43.77239144664712 0.0547478964384323 3 [{I|L}T]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SDA{I|L} 9 -1 + 67.278 0.0 0.0 6.8059 6.8059 86.318 0.0 0.0 0.0 5.31234684152075 16.478174818886373 5.31234684152075 5.31234684152075 0 0.805462187404089 1.6989700043360187 1.4916440611282624 0.3494850021680094 [{I|L}T]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SDA{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]TSDA{I|L};[{I|L}T]T[PA]TSDA{I|L};[{I|L}T]{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}DA{I|L};[RV]{I|L}DTSDA{I|L};[{I|L}T]T{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DA{I|L};{NN|[MP]|[D{I|L}]|[EV]}VRTSDA{I|L};[{I|L}T]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SW{I|L};[{I|L}T]T[PA]TSW{I|L};[QA]KRTSDA{I|L} 6.8059;6.2685;6.2583;6.1163;6.0406;5.5659;5.2875;5.0268;4.8272;4.5151 -;-;-;-;+;-;-;-;-;- + 1155 1 1.569 145936.2 1.0 4849 5298 10135 HBL1_DMSO_200M_050219_1,10149 HBL1_DMSO_200M_050219_1,10149,VRLDTSDAL False False RVLDTSDAL 53.003488 495.26622313261 2018758.75 10135.0 ENSG00000115760|ENST00000421745|BIRC6 6.363705158233643 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10150 53.013 547.0 149190.0 25 0 8133.0 + 34182 SLNEVCPIWEQ 11 113 659.3129150271416 0 659.3129150271416 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _SLNEVCPIWEQ_ REV__ENSG00000120457|ENST00000529694|KCNJ5 11.631370582801994 0.4351972924868201 3 QNDA[KA]VV 8 -1 22.74 0.0 0.0 1.7285 0.0 0.0 247.1042522504402 240.06301294498283 487.1672651954231 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QNDA[KA]VV 1.7285 - 471 + 1 1.569 65866.9 1.0 4850 5298 10135 HBL1_DMSO_200M_050219_1,10150 HBL1_DMSO_200M_050219_1,10150,SLNEVCPIWEQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10151 53.024 563.0 286890.0 25 0 17463.0 -1 0 142 691.3476420270906 690.3403655604906 1 691.3470336794853 MULTI CID FTMS 0 0 0 10135 257330.453125 0.9387609516370056 1 -0.1191444396972656 16 3 {NN|[MP]|[D{I|L}]|[EV]}TTE{I|L} 6 -1 + 43.788 0.0 0.0 6.3429 6.3429 80.25 0.0 0.0 0.0 2.02410126523349 14.69273760456403 2.02410126523349 2.02410126523349 0 0.2887254899964357 1.3010299956639813 1.2396518287104437 0.0 {NN|[MP]|[D{I|L}]|[EV]}TTE{I|L};{[TV]|[{I|L}S]}ETE{I|L};{[ET]|[MV]}TVE{I|L};{[QN]|[E{I|L}]|[KN]}STE{I|L};{[ET]|[MV]}VTE{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}{[ET]|[MV]};{[ES]|[DT]|[{I|L}C]}{I|L}TE{I|L};{[TV]|[{I|L}S]}E{I|L}{[ET]|[MV]};{[QN]|[E{I|L}]|[KN]}[WM]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[VG][C(Carbamidomethyl (C))K] 6.3429;6.0497;5.468;4.8944;3.9406;2.9793;2.7341;2.6861;2.6752;2.4597 -;-;-;-;-;-;-;-;-;- 288 1 1.569 120976.7 1.0 4851 5298 10135 HBL1_DMSO_200M_050219_1,10151 HBL1_DMSO_200M_050219_1,10151, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10152 53.036 652.0 415370.0 25 0 28401.0 + + -1 VAFEEQNAV 9 233 503.7453002981873 1005.4760476631748 2 504.2462951540947 MULTI CID FTMS 0 0 0 10135 177676.484375 1.0 0 0.0 17 Oxidation (M) _GLDQLM(Oxidation (M))NTV_ ENST00000461099.1_1_19:3576912-3578370:+|nuORF;ENST00000488973.6_1_19:3574329-3578516:+|nuORF;nc|ENSG00000064961|Q9P0W2-2|HMG20B;ENSG00000064961|ENST00000333651|HMG20B;nc|ENSG00000064961|Q9P0W2-3|HMG20B 30.22481116460888 0.1466181017706357 3 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}EQMV 7 -1 20.13 0.0 0.0 2.0021 0.0 0.0 0.0 198.05036341928715 198.05036341928715 4.623686964175649 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.4247425010840047 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}EQMV 2.0021 - 2962 1 1.569 201036.4 1.0 4852 5298 10135 HBL1_DMSO_200M_050219_1,10152 HBL1_DMSO_200M_050219_1,10152,GLDQLMNTV False False VAFEEQNAV 53.035525 504.246295154095 1695991.75 10135.0 ENST00000461099.1_1_19:3576912-3578370:+|nuORF;;ENST00000488973.6_1_19:3574329-3578516:+|nuORF;;nc|ENSG00000064961|Q9P0W2-2|HMG20B;;ENSG00000064961|ENST00000333651|HMG20B;;nc|ENSG00000064961|Q9P0W2-3|HMG20B 1.1995164155960083 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10153 53.047 648.0 104320.0 25 0 17041.0 15073 IMKLRKILEK 10 97 636.4163832240821 0 636.2479736208916 PEAK CID FTMS 0 0 0 10135 34688.74609375 0.8943177013960322 -1 0.0814094543457031 18 Unmodified _IMKLRKILEK_ ENSG00000083799|ENST00000427738|CYLD;ENST00000563629.1_1_16:50783909-50820919:+|nuORF;nc|ENSG00000083799|Q9NQC7-2|CYLD 1.844237919475145 0.3961065659209837 3 Q 1 10 6.9897 0.0 0.0 0.55002 0.0 0.0 148.37607379935986 991.3584564447274 1139.7345302440872 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.55002 - 12 + 1 1.569 56923.9 1.0 4853 5298 10135 HBL1_DMSO_200M_050219_1,10153 HBL1_DMSO_200M_050219_1,10153,IMKLRKILEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10154 53.061 727.0 47816.0 25 0 2058.8 -1 QKHIMAERNVL 11 75 677.8654052615166 0 677.8654052615166 PEAK CID FTMS 0 0 0 -1 0 19 Oxidation (M) _QKHIM(Oxidation (M))AERNVL_ ENSG00000104205|ENST00000521198|SGK3;nc|ENSG00000288602|Q96BR1-2|SGK3 10.799506525563784 0.4428795054024277 3 VN{[SA]|[TG]}Q 5 -1 19.718 0.0 0.0 1.4566 0.0 0.0 131.09837046303625 720.3571261041624 851.4554965671987 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 VN{[SA]|[TG]}Q 1.4566 - 32 + 1 1.569 32792.1 1.0 4854 5298 10135 HBL1_DMSO_200M_050219_1,10154 HBL1_DMSO_200M_050219_1,10154,QKHIMAERNVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10155 53.065 240.0 448180.0 25 0 95257.0 -1 LSCMGFQGNG 10 107 515.209348537261 1028.404144141322 2 515.2085449099541 MULTI CID FTMS 0 0 0 10135 121808.328125 1.0 0 0.0 20 Oxidation (M) _LSCM(Oxidation (M))GFQGNG_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 10.823927491677226 0.6659270209832991 3 DY{I|L}V 4 -1 18.928 0.0 0.0 1.8405 0.0 0.0 111.8796984562336 423.2485445611938 535.1282430174274 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DY{I|L}V 1.8405 - 121 + 1 1.569 89825.4 1.0 4855 5298 10135 HBL1_DMSO_200M_050219_1,10155 HBL1_DMSO_200M_050219_1,10155,LSCMGFQGNG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10157 53.075 383.0 263040.0 25 0 27926.0 + 18183 KVADGFKVV 9 129 481.78749619591446 961.5604394586288 2 481.7871581912041 MULTI CID FTMS 0 0 0 10156 181115.84375 0.2692593840431312 1 -0.1019973754882812 1 Unmodified _KVADGFKVV_ ENSG00000163655|ENST00000496455|GMPS;nc|ENSG00000163655|P49915-2|GMPS 38.17557092003332 0.0854718145212029 3 [{M(Oxidation (M))|F}T]NRVKVV 8 6 + 35.199 0.0 0.0 3.6607 3.6607 70.746 0.0 0.0 0.0 8.097470326966189 19.00158309413092 8.097470326966189 1.4612803567823818 0 0.8424778212679485 0.0 0.6139829889124311 0.0 [{M(Oxidation (M))|F}T]NRVKVV;[{M(Oxidation (M))|F}T]NVRKVV;[{M(Oxidation (M))|F}T]NVGVKVV;{[VA]|[{I|L}G]}[YQ]RKVV;[{M(Oxidation (M))|F}T]NVKRVV;{[VA]|[{I|L}G]}[YQ]GVKVV;[{M(Oxidation (M))|F}T]GGRVKVV;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}KVKVV;[{M(Oxidation (M))|F}T]N[{I|L}A]AKVV;[{M(Oxidation (M))|F}T]GGVRKVV 3.6607;3.5087;3.4555;2.7694;2.726;2.7162;2.6974;2.6646;2.6151;2.5455 -;-;-;-;-;-;-;-;-;- 693 1 1.569 84493.7 1.0 4856 5299 10156 HBL1_DMSO_200M_050219_1,10157 HBL1_DMSO_200M_050219_1,10157,KVADGFKVV True True KVADGFKVV 53.075404 481.787158191204 3716671.75 10156.0 nc|ENSG00000163655|P49915-2|GMPS;;ENSG00000163655|ENST00000496455|GMPS 3.172262191772461 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10158 53.077 23.0 1931000.0 25 0 293860.0 + 35074 SQVEDLERV 9 50 537.7751792300256 1073.5358055268512 2 537.7753173708916 MULTI CID FTMS 0 0 0 10156 2261384.25 1.0 0 0.0 2 Unmodified _SQVEDLERV_ ENSG00000079616|ENST00000160827|KIF22;ENST00000568312.1_1_16:29815990-29816628:+|nuORF;nc|ENSG00000079616|Q14807-2|KIF22 38.61474834105838 0.0830609365873449 3 {[QS]|[NT]}VED{I|L}E[RV] 9 0 + 65.34 0.0 0.0 6.0864 6.0864 90.719 0.0 0.0 0.0 64.96125892196727 5.642492736872597 5.642492736872597 18.750612633917 0 1.0 1.2218487496163564 0.4247425010840047 0.0 + + {[QS]|[NT]}VED{I|L}E[RV];{[QS]|[NT]}VVEEE[RV] 6.0864;4.3398 +;- + 64 + 1 1.569 43571.7 1.0 4857 5299 10156 HBL1_DMSO_200M_050219_1,10158 HBL1_DMSO_200M_050219_1,10158,SQVEDLERV True True SQVEDLERV 53.076581 537.775317370892 16027704.0 10156.0 nc|ENSG00000079616|Q14807-2|KIF22;;ENSG00000079616|ENST00000160827|KIF22;;ENST00000568312.1_1_16:29815990-29816628:+|nuORF 7.23272720972697 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10159 53.078 45.0 846550.0 25 0 98021.0 + 39147 TYLPAGQSV 9 69 468.24547430570897 934.476395678218 2 468.2454711794853 MULTI CID FTMS 0 0 0 10156 1159482.625 0.6485564334007653 -1 0.1191444396972656 3 Unmodified _TYLPAGQSV_ ENSG00000167085|ENST00000300408|PHB1;nc|ENSG00000167085|P35232-2|PHB1 34.10243960390752 0.1078313939113124 3 [YT]{I|L}Y 4 6 30.406 0.0 0.0 3.2538 0.0 0.0 0.0 391.1939609460492 391.1939609460492 9.778842708858155 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [YT]{I|L}Y 3.2538 - 78 1 1.569 35461.1 1.0 4858 5299 10156 HBL1_DMSO_200M_050219_1,10159 HBL1_DMSO_200M_050219_1,10159,TYLPAGQSV True True TYLPAGQSV 53.077814 468.245471179485 12158959.0 10156.0 ENSG00000167085|ENST00000300408|PHB1;;nc|ENSG00000167085|P35232-2|PHB1 5.139826854070027 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10160 53.079 71.0 2173800.0 25 0 342570.0 + 41774 VPVGKVLKV 9 136 313.55147352012943 937.6325911605884 3 313.5512573122978 MULTI CID FTMS 0 0 0 10156 947807.125 0.3214148403319012 -2 0.2005538940429687 4 Unmodified _VPVGKVLKV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 37.97399986684836 0.0865783450051559 3 VPV[KG]V{I|L}KV 9 0 + 55.561 0.0 0.0 5.9257 5.9257 79.292 0.0 0.0 0.0 30.59099295367353 3.979400086720375 3.979400086720375 2.2454626555970947 0 0.7302046884880937 2.0 0.0 0.0 + + VPV[KG]V{I|L}KV;VPVV[KG]{I|L}KV;VPV[KG]V{I|L}VK;VPVV[KG]{I|L}VK;VVP[KG]V{I|L}KV;VVPV[KG]{I|L}KV;VVP[KG]V{I|L}VK;VVPV[KG]{I|L}VK 5.9257;5.6862;5.5013;5.2618;3.8955;3.656;3.4711;3.2316 +;-;-;-;-;-;-;- + 630 + 1 1.569 126059.3 1.0 4859 5299 10156 HBL1_DMSO_200M_050219_1,10160 HBL1_DMSO_200M_050219_1,10160,VPVGKVLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10161 53.081 80.0 1456400.0 25 0 243220.0 + 11560 GIVTRVSEV 9 133 480.2791644899053 958.5437760466108 2 480.2797424197197 MULTI CID FTMS 0 0 0 10156 821974.5625 0.9664203364881114 1 -0.1019973754882812 5 Unmodified _GIVTRVSEV_ ENSG00000166508|ENST00000303887|MCM7;ENST00000463722.5_1_7:99695745-99696843:-|nuORF;nc|ENSG00000166508|P33993-2|MCM7 40.23920728925047 0.0741434193262949 3 {NN|[MP]|[D{I|L}]|[EV]}SRTVVAV 9 6 + 48.951 0.0 0.0 5.1068 5.1068 83.307 0.0 0.0 0.0 8.41994196323649 10.383643918355354 8.41994196323649 8.41994196323649 0 0.0 1.3010299956639813 0.9802046884880936 0.0 {NN|[MP]|[D{I|L}]|[EV]}SRTVVAV;{[TV]|[{I|L}S]}RDTVVAV;{[TV]|[{I|L}S]}DRTVVAV;{[TV]|[{I|L}S]}R[VS]EVAV;{[TV]|[{I|L}S]}R{[VA]|[{I|L}G]}VSEV;{[ES]|[DT]|[{I|L}C]}VRTVVAV;{NN|[MP]|[D{I|L}]|[EV]}SRT[R{I|L}]V;{[VA]|[{I|L}G]}V[C(Carbamidomethyl (C))Q][RK]V;{NN|[MP]|[D{I|L}]|[EV]}SR[K{I|L}]EV;{[TV]|[{I|L}S]}R[R{I|L}]SEV 5.1068;4.2284;3.9722;3.8283;3.308;3.1214;3.0524;2.9691;2.9219;2.6321 -;-;-;-;-;-;-;-;-;- 646 1 1.569 90643.4 1.0 4860 5299 10156 HBL1_DMSO_200M_050219_1,10161 HBL1_DMSO_200M_050219_1,10161,GIVTRVSEV True True GIVTRVSEV 53.081289 480.27974241972 6232809.0 10156.0 nc|ENSG00000166508|P33993-2|MCM7;;ENSG00000166508|ENST00000303887|MCM7;;ENST00000463722.5_1_7:99695745-99696843:-|nuORF 5.243776162465413 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10162 53.083 66.0 1145200.0 25 0 212260.0 + 43690 YAYDGKDYLA 10 84 589.771785071062 1177.529017208924 2 589.7714721560478 MULTI CID FTMS 0 0 0 10156 790956.3125 0.2822826912162675 -1 0.1191444396972656 6 Unmodified _YAYDGKDYLA_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 53.40400417844725 0.0601721406801337 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY[{I|L}A] 10 5 + 67.369 0.0 0.0 5.7212 5.7212 80.633 0.0 0.0 0.0 2.149532035683933 44.05787502935297 2.149532035683933 3.490217871458867 0 0.6989700043360187 2.0 1.548455006504028 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY[{I|L}A];{[YD]|[{M(Oxidation (M))|F}M]}GKDYAY[{I|L}A];[KG]DYDYAY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YD[QT]AY[{I|L}A];[KG]DDYYAY[{I|L}A];{[YD]|[{M(Oxidation (M))|F}M]}GKD{I|L}[HD]{[ES]|[DT]|[{I|L}C]};YAY{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[QT]{[ES]|[DT]|[{I|L}C]};YAY{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[NV]|[RG]}[MT];[WH]{I|L}YDKG{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]{I|L}SY[W{M(Oxidation (M))|F}] 5.7212;5.4248;4.7327;4.5973;4.2636;3.813;3.6382;3.5369;3.5091;3.3619 -;-;-;-;-;-;-;-;-;- 1531 1 1.569 60783.4 1.0 4861 5299 10156 HBL1_DMSO_200M_050219_1,10162 HBL1_DMSO_200M_050219_1,10162,YAYDGKDYLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10163 53.085 92.0 901460.0 25 0 140260.0 + 3804 DAIKEIAKV 9 99 493.7978952698197 985.5812376064396 2 493.7976562380791 MULTI CID FTMS 0 0 0 10156 801695.3125 0.7716600371045326 -1 0.1191444396972656 7 Unmodified _DAIKEIAKV_ ENSG00000117000|ENST00000372771|RLF 64.9267550582149 0.0233543250187123 3 DA{I|L}KE{I|L}AKV 9 0 + 99.224 0.0 0.0 10.068 10.068 87.29 0.0 0.0 0.0 29.711309630365577 2.688453122925808 2.688453122925808 2.688453122925808 0 2.6747425010840047 1.6989700043360187 0.2614393726401688 0.0 + + DA{I|L}KE{I|L}AKV;DA{I|L}KE{I|L}AVK;DA{I|L}KE{I|L}VAK;V{[CP]|[EA]}KE{I|L}AKV;V{[CP]|[EA]}KE{I|L}AVK;V{[CP]|[EA]}KE{I|L}VAK 10.068;9.7948;8.2729;7.0075;6.7347;5.2127 +;-;-;-;-;- + 2032 + 1 1.569 66966.5 1.0 4862 5299 10156 HBL1_DMSO_200M_050219_1,10163 HBL1_DMSO_200M_050219_1,10163,DAIKEIAKV True True DAIKEIAKV 53.084899 493.797656238079 7034972.5 10156.0 ENSG00000117000|ENST00000372771|RLF 4.7666122118632 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10164 53.087 112.0 1651600.0 25 0 365500.0 + 26157 NPYLVRRI 8 105 515.8112648597182 1029.6079767862363 2 515.8118774294853 MULTI CID FTMS 0 0 0 10156 601480.25 0.4119828971824907 -1 0.1191444396972656 8 Unmodified _NPYLVRRI_ ENSG00000149480|ENST00000278823|MTA2;ENST00000526844.1_1_11:62365783-62368922:-|nuORF 85.27202061508552 0.0687763219216887 3 {I|L}N{M(Oxidation (M))|F}{I|L}[RV]{I|L}R 8 5 + 58.695 0.0 0.0 5.7007 5.7007 81.053 0.0 0.0 0.0 9.547509540478032 3.853508813640176 3.853508813640176 3.853508813640176 0 1.174742501084005 0.0 0.0 1.805462187404089 {I|L}N{M(Oxidation (M))|F}{I|L}[RV]{I|L}R;{I|L}N{M(Oxidation (M))|F}{I|L}[RV]R{I|L};{I|L}GG{M(Oxidation (M))|F}{I|L}[RV]{I|L}R;[NP]Y{I|L}[RV]{I|L}R;{I|L}GG{M(Oxidation (M))|F}{I|L}[RV]R{I|L};[NP]Y{I|L}[RV]R{I|L};{I|L}D{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RV]{I|L}R;{I|L}D{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RV]R{I|L} 5.7007;5.3265;4.8012;4.7735;4.4269;4.3992;3.8022;3.4279 -;-;-;-;-;+;-;- + 209 + 1 1.569 147625.9 1.0 4863 5299 10156 HBL1_DMSO_200M_050219_1,10164 HBL1_DMSO_200M_050219_1,10164,NPYLVRRI True True NPYLVRRI 53.087262 515.811877429485 11129610.25 10156.0 ENSG00000149480|ENST00000278823|MTA2;;ENST00000526844.1_1_11:62365783-62368922:-|nuORF;;MTA2|p.N31S|1|0.18|ENSG00000149480|chr11:62600626-62600626|T/C|missense_variant 6.869783083597819 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10165 53.089 94.0 1132400.0 25 0 173030.0 -1 EGYMSERDG 9 114 530.204576432536 1058.394599931872 2 530.2045776247978 MULTI CID FTMS 0 0 0 10156 537978.875 0.4350566965628261 -1 0.1191444396972656 9 Oxidation (M) _EGYM(Oxidation (M))SERDG_ ENSG00000170613|ENST00000302938|GARIN3 14.838274106304384 0.4350285940865338 3 {[DA]|[EG]}YC 4 -1 34.425 0.0 0.0 3.2525 0.0 0.0 0.0 603.2343844049436 603.2343844049436 20.647754653050395 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {[DA]|[EG]}YC 3.2525 - 199 + 1 1.569 87132.1 1.0 4864 5299 10156 HBL1_DMSO_200M_050219_1,10165 HBL1_DMSO_200M_050219_1,10165,EGYMSERDG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10166 53.092 124.0 615910.0 25 0 58269.0 38679 TTLKEKLHKS 10 110 395.5727399317575 1183.6963903954725 3 395.5723754763603 MULTI CID FTMS 0 0 0 10156 444772.8125 1.0 0 0.0 10 Unmodified _TTLKEKLHKS_ ENSG00000197980|ENST00000356539|LEKR1 12.855947597645695 0.6318316972389167 3 TT{I|L}KY{I|L} 6 5 62.612 0.0 0.0 5.2896 0.0 0.0 0.0 461.25238817915607 461.25238817915607 33.22682509756042 0.0 0.0 0.0 0 0.4731975075880328 1.5228787452803376 0.0 0.0 TT{I|L}KY{I|L} 5.2896 - 233 + 1 1.569 68528.6 1.0 4865 5299 10156 HBL1_DMSO_200M_050219_1,10166 HBL1_DMSO_200M_050219_1,10166,TTLKEKLHKS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10167 53.097 249.0 248640.0 25 0 13965.0 + 37116 TGYLNTVT 8 86 868.4412026523785 867.4339261857784 1 868.4402953982353 MULTI CID FTMS 0 0 0 10156 367697.75 0.1428097593998147 2 -0.1900863647460937 11 Unmodified _TGYLNTVT_ ENSG00000204628|ENST00000512805|RACK1;ENST00000506742.2_1_5:108120754-108121222:+|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 78.14939416004806 0.0999748067387998 3 {[QS]|[NT]}{I|L}YGTVT 8 4 + 58.708 0.0 0.0 6.768 6.768 85.615 0.0 0.0 0.0 1.6819853520606642 12.300369321183382 1.6819853520606642 4.771212547196626 0 0.3252574989159953 0.0 1.6237125054200234 1.305462187404089 {[QS]|[NT]}{I|L}YGTVT;{[QV]|[N{I|L}]|[RA]|[KV]}TYGTVT;{[TV]|[{I|L}S]}QYGTVT;{[QS]|[NT]}[YG]{I|L}TVT;{[QV]|[N{I|L}]|[RA]|[KV]}YTGTVT;{[QV]|[N{I|L}]|[RA]|[KV]}YGTTVT;{[QS]|[NT]}A[YV]TVT;[YR]N{I|L}CVT;HV[VP]NCVT;[{M(Oxidation (M))|F}E][KS]GTVT 6.768;6.2179;6.0739;5.5247;5.5207;5.3949;5.2304;4.8381;4.7352;4.2562 -;-;-;-;-;-;-;-;-;- 1056 1 1.569 47429.1 1.0 4866 5299 10156 HBL1_DMSO_200M_050219_1,10167 HBL1_DMSO_200M_050219_1,10167,TGYLNTVT True True TGYLNTVT 53.096549 868.440295398235 16986744.0 10156.0 ENSG00000204628|ENST00000512805|RACK1;;ENST00000514183.5_1_5:180665952-180670713:-|nuORF;;ENST00000506742.2_1_5:108120754-108121222:+|nuORF 5.762513001759847 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10168 53.1 153.0 645610.0 25 0 58659.0 + 17870 KQLEVVHTL 9 133 533.8169606137454 0 533.8167602419853 PEAK CID FTMS 0 0 0 10156 254010.015625 1.0 0 0.0 12 Unmodified _KQLEVVHTL_ ENSG00000014123|ENST00000369278|UFL1;nc|ENSG00000014123|O94874-3|UFL1 36.506200033944 0.0788933506710822 3 DHV 3 8 20.802 0.0 0.0 1.9521 0.0 0.0 117.12237229995328 594.3252047174436 711.447577017397 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 DHV 1.9521 - 650 + 1 1.569 79457.1 1.0 4867 5299 10156 HBL1_DMSO_200M_050219_1,10168 HBL1_DMSO_200M_050219_1,10168,KQLEVVHTL True True KQLEVVHTL 53.099595 533.816760241985 2028615.625 10156.0 nc|ENSG00000014123|O94874-3|UFL1;;ENSG00000014123|ENST00000369278|UFL1 2.42484720547994 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10169 53.104 217.0 333420.0 25 0 35509.0 + 45018 YPTQPLAL 8 102 451.7530328454394 901.4915127576788 2 451.7523681521416 MULTI CID FTMS 0 0 0 10156 234265.875 0.2520806848328663 32 -2.8770408630371094 13 Unmodified _YPTQPLAL_ REV__ENST00000602656.1_1_16:67691511-67691807:-|nuORF 18.13498045792455 0.6430038125133779 3 YP 2 -1 45.217 0.0 0.0 5.0157 0.0 0.0 0.0 638.3534246073856 638.3534246073856 31.72167511924052 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YP 5.0157 + + 159 + 1 1.569 65316.3 1.0 4868 5299 10156 HBL1_DMSO_200M_050219_1,10169 HBL1_DMSO_200M_050219_1,10169,YPTQPLAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10170 53.118 800.0 641300.0 25 0 34687.0 + 26158 NPYLVRRI 8 302 344.20916482691973 1029.6056650809592 3 344.2093994021416 MULTI CID FTMS 0 0 0 10156 199683.5625 0.7508835394269223 -1 0.1191444396972656 14 Unmodified _NPYLVRRI_ ENSG00000149480|ENST00000278823|MTA2;ENST00000526844.1_1_11:62365783-62368922:-|nuORF 25.399314129420983 0.5099049743284904 3 GGPY{I|L}[KA]{I|L} 8 5 49.43 0.0 0.0 4.8008 0.0 0.0 0.0 227.130670415686 227.130670415686 24.648415687162952 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 1.1549471895720984 GGPY{I|L}[KA]{I|L} 4.8008 - 217 + 1 1.569 419560.1 0.800000011920929 4869 5299 10156 HBL1_DMSO_200M_050219_1,10170 HBL1_DMSO_200M_050219_1,10170,NPYLVRRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10171 53.124 377.0 656360.0 25 0 115980.0 44682 YPFKPPKVRN 10 157 415.9082101762759 1244.7028011290276 3 415.9078552126884 MULTI CID FTMS 0 0 0 10156 194228.90625 0.357952764684885 -5 0.5741539001464844 15 Unmodified _YPFKPPKVRN_ ENST00000495141.5_1_3:23848730-23929256:+|nuORF 12.174745833636583 0.6432616012102976 3 YP{M(Oxidation (M))|F}K[RN]PPKV 10 4 + 42.64 0.0 0.0 3.4257 3.4257 76.168 0.0 0.0 0.0 20.138050198288013 3.3873064999007667 3.3873064999007667 5.740312677277188 0 0.5 1.5228787452803376 0.0 0.1421590589602531 YP{M(Oxidation (M))|F}K[RN]PPKV;YP{M(Oxidation (M))|F}K[RN]PPVK;YP{M(Oxidation (M))|F}K[RN]PVPK;YP{M(Oxidation (M))|F}K[RN]VPPK;YP{M(Oxidation (M))|F}K[HV][R{I|L}]SV 3.4257;2.9645;2.6284;2.5505;0.99062 -;-;-;-;- 504 + 1 1.569 195615.6 1.0 4870 5299 10156 HBL1_DMSO_200M_050219_1,10171 HBL1_DMSO_200M_050219_1,10171,YPFKPPKVRN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10172 53.138 800.0 424940.0 25 0 16736.0 -1 AMLDEECL 8 253 498.7042935948166 995.3940342564332 2 498.7037841677666 MULTI CID FTMS 0 0 0 10156 160702.75 0.7236413294514829 -1 0.1191444396972656 16 Carbamidomethyl (C),Oxidation (M) _AM(Oxidation (M))LDEEC(Carbamidomethyl (C))L_ ENSG00000128641|ENST00000392318|MYO1B;ENSG00000166866|ENST00000300119|MYO1A;ENST00000494129.1_1_2:192246088-192252282:+|nuORF;nc|ENSG00000128641|O43795-2|MYO1B 14.581692164780916 0.6954967302934248 3 TV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L} 6 -1 23.479 0.0 0.0 2.3588 0.0 0.0 304.02000631557195 0.0 304.02000631557195 0.0 5.15153777800478 0.0 0.0 0 0.0 0.0 0.75 0.3494850021680094 TV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L} 2.3588 - 3386 + 1 1.569 250238.7 0.8999999761581421 4871 5299 10156 HBL1_DMSO_200M_050219_1,10172 HBL1_DMSO_200M_050219_1,10172,AMLDEECL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10173 53.152 800.0 66493.0 25 0 18270.0 -1 0 32 1163.7895499409224 3488.3468204229675 3 1164.457324206829 MULTI CID FTMS 0 0 0 10156 164221.78125 1.0 0 0.0 17 3 E 1 -1 5.4846 0.0 0.0 0.15722 0.0 0.0 2832.117397466804 524.1624239557249 3356.2798214225286 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15722 - 1 + 1 1.569 52685.2 0.6200000047683716 4872 5299 10156 HBL1_DMSO_200M_050219_1,10173 HBL1_DMSO_200M_050219_1,10173, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10174 53.167 800.0 218770.0 25 0 12251.0 23448 LTFRALRRAL 10 204 406.2594471398489 1215.7565120197469 3 406.2596923708916 MULTI CID FTMS 0 0 0 10156 103905.140625 1.0 0 0.0 18 Unmodified _LTFRALRRAL_ ENSG00000160606|ENST00000292090|TLCD1 14.838274106304384 0.5985701837916485 3 {I|L}QA{I|L} 4 7 24.737 0.0 0.0 2.0347 0.0 0.0 772.4844252714857 0.0 772.4844252714857 0.0 11.63811573052314 0.0 0.0 0 0.4731975075880329 0.0 0.0 0.3807196863200844 {I|L}QA{I|L} 2.0347 - 325 1 1.569 140912.8 0.6000000238418579 4873 5299 10156 HBL1_DMSO_200M_050219_1,10174 HBL1_DMSO_200M_050219_1,10174,LTFRALRRAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10176 53.171 23.0 2987700.0 25 0 362600.0 + 6144 DSYTPKVI 8 80 461.7476926100822 921.4808322869644 2 461.7476684451103 MULTI CID FTMS 0 0 0 10175 1929713.25 0.0784566595085671 3 -0.3440628051757812 1 Unmodified _DSYTPKVI_ ENSG00000133872|ENST00000256255|SARAF;ENST00000517569.1_1_8:29931365-29940465:-|nuORF 28.486842064014134 0.4448922141344407 3 [W{M(Oxidation (M))|F}]YTVPG 7 6 20.221 0.0 0.0 2.1944 0.0 0.0 0.0 68.05135523013905 68.05135523013905 -0.4727400490210698 0.0 -0.4727400490210698 0.0 0 0.0 0.0 0.0 0.0 [W{M(Oxidation (M))|F}]YTVPG 2.1944 - 120 + 1 1.569 59473.2 1.0 4874 5300 10175 HBL1_DMSO_200M_050219_1,10176 HBL1_DMSO_200M_050219_1,10176,DSYTPKVI False True DSYTPKVI 53.171447 461.74766844511 556123968.0 10175.0 ENST00000517569.1_1_8:29931365-29940465:-|nuORF;;ENSG00000133872|ENST00000256255|SARAF 6.686293284098308 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10177 53.173 39.0 1254700.0 25 0 160270.0 + 18510 KYQAQDNFM 9 93 572.7579684805963 1143.5013840279926 2 572.7581664919853 MULTI CID FTMS 0 0 0 10175 1182343.0 0.4460666364910776 2 -0.2223358154296875 2 Unmodified _KYQAQDNFM_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 52.268347100219714 0.0353964759249114 3 [YK]QAQDN{M(Oxidation (M))|F}M 9 0 + 60.287 0.0 0.0 5.2722 5.2722 81.582 0.0 0.0 0.0 5.686362358410122 10.330145895351848 5.686362358410122 5.686362358410122 0 0.8182503180159344 1.0457574905606752 0.0 1.055462187404089 + + [YK]QAQDN{M(Oxidation (M))|F}M;[YQ]KAQDN{M(Oxidation (M))|F}M;[YK]QAQDGG{M(Oxidation (M))|F}M;[YK][AG]AQDN{M(Oxidation (M))|F}M;[YK]QA[AG]DN{M(Oxidation (M))|F}M;[QA]YKQDN{M(Oxidation (M))|F}M;{[HG]|PP}PQAQDN{M(Oxidation (M))|F}M;[YQ]AKQDN{M(Oxidation (M))|F}M;[YQ]KAQDGG{M(Oxidation (M))|F}M;[YQ]KA[AG]DN{M(Oxidation (M))|F}M 5.2722;4.7749;4.4669;4.4669;4.4669;4.4269;4.2484;4.1636;3.9696;3.9696 +;-;-;-;-;-;-;-;-;- + 529 1 1.569 43938.4 1.0 4875 5300 10175 HBL1_DMSO_200M_050219_1,10177 HBL1_DMSO_200M_050219_1,10177,KYQAQDNFM True True KYQAQDNFM 53.172626 572.758166491985 39243464.0 10175.0 ENST00000379752.5_1_1:157029186-157029948:-|nuORF;;nc|ENSG00000122692|Q2TAY7-2|SMU1;;ENSG00000122692|ENST00000397149|SMU1 8.095817883809408 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10178 53.174 11.0 5079200.0 25 0 708970.0 + 41776 VPVGKVLKV 9 64 469.82356417513176 937.6325754170635 2 469.8236266970634 MULTI CID FTMS 0 0 0 10175 4933211.0 0.7605637798264345 -1 0.1019973754882812 3 Unmodified _VPVGKVLKV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 37.97399986684836 0.0865783450051559 3 [VP][KG]V{I|L}KVV 9 2 + 53.254 0.0 0.0 5.6797 5.6797 88.35 0.0 0.0 0.0 7.580240701170169 21.534759048170216 7.580240701170169 12.557809497117844 0 0.6421590589602533 2.0 0.0 0.0 [VP][KG]V{I|L}KVV;[K{I|L}]VGKVPVV;[K{I|L}]VGVPKVV;[K{I|L}]VGVKPVV;[KG][{I|L}V]KVPVV;[KG][{I|L}V]VPKVV;[KG][VP]V{I|L}KVV;[KG][{I|L}V]VKPVV 5.6797;4.3403;4.0193;3.8315;3.0146;2.6936;2.5603;2.5058 -;-;-;-;-;-;-;- 384 1 1.569 46283.9 1.0 4876 5300 10175 HBL1_DMSO_200M_050219_1,10178 HBL1_DMSO_200M_050219_1,10178,VPVGKVLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10179 53.175 15.0 3581800.0 25 0 646620.0 + 24404 MFQNRVRPL 9 62 387.549506438511 1159.626689915733 3 387.5500366091728 MULTI CID FTMS 0 0 0 10175 3040602.0 0.1987922492910438 -2 0.2211418151855468 4 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 16.942295170755138 0.3780752226737986 3 M{M(Oxidation (M))|F} 2 7 20.969 0.0 0.0 1.8083 0.0 0.0 0.0 878.4971846387764 878.4971846387764 10.969100130080562 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + M{M(Oxidation (M))|F} 1.8083 + + 11 + 1 1.569 50011.0 1.0 4877 5300 10175 HBL1_DMSO_200M_050219_1,10179 HBL1_DMSO_200M_050219_1,10179,MFQNRVRPL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10180 53.176 50.0 1684000.0 25 0 131240.0 + 18514 KYQAVTATL 9 105 497.7821581064288 993.5497632796576 2 497.7823669314384 MULTI CID FTMS 0 0 0 10175 1152805.875 0.3552474539521925 -2 0.2211418151855468 5 Unmodified _KYQAVTATL_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000425147.1_1_21:26734448-26734742:+|nuORF;ENST00000478813.1_1_8:81177882-81177960:-|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 81.89019881105858 0.0170587746866453 3 [YQ]AKVTAT{I|L} 9 2 + 69.919 0.0 0.0 7.0373 7.0373 79.169 0.0 0.0 0.0 2.003187623076954 3.9904371307691378 2.003187623076954 0.2422750325201406 0 0.5 0.0 1.3494850021680094 0.8851518780601924 [YQ]AKVTAT{I|L};[YQ]KAVTAT{I|L};[YK]QAVTAT{I|L};[QA]YKVTAT{I|L};[YQ]AVKTAT{I|L};[{I|L}T]AN[YK]AT{I|L};[YK][AG]AVTAT{I|L};[{I|L}T]H[{I|L}P]EAT{I|L};[QA]YVKTAT{I|L};[{I|L}V]{[YD]|[{M(Oxidation (M))|F}M]}VTAT{I|L} 7.0373;7.013;6.8357;6.7344;6.1482;5.9993;5.9089;5.9017;5.8452;5.6147 -;-;+;-;-;-;-;-;-;- + 1368 1 1.569 66156.4 1.0 4878 5300 10175 HBL1_DMSO_200M_050219_1,10180 HBL1_DMSO_200M_050219_1,10180,KYQAVTATL True True KYQAVTATL 53.176301 497.782366931438 50537420.0 10175.0 ENST00000425147.1_1_21:26734448-26734742:+|nuORF;;nc|ENSG00000293056|Q6NVV1|RPL13AP3;;ENST00000478813.1_1_8:81177882-81177960:-|nuORF;;ENSG00000142541|ENST00000391857|RPL13A 6.281391461690267 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10181 53.178 63.0 1252400.0 25 0 86405.0 + 6448 EAFEHPNVV 9 102 521.2534436715681 1040.492334409936 2 521.2538329958916 MULTI CID FTMS 0 0 0 10175 834963.9375 0.3463723346068079 -2 0.2211418151855468 6 Unmodified _EAFEHPNVV_ ENSG00000135446|ENST00000257904|CDK4;ENST00000551706.1_1_12:58145281-58145962:-|nuORF 78.7280429016045 0.0178249292250809 3 [NP]VCAE[NP]VV 10 6 + 44.887 0.0 0.0 4.3141 4.3141 72.067 0.0 0.0 0.0 1.2057393120585047 5.360844192765192 1.2057393120585047 1.2057393120585047 0 1.305462187404089 0.0 1.5 0.0 [NP]VCAE[NP]VV;[PG]GVCAE[NP]VV;{[CP]|[EA]}{M(Oxidation (M))|F}HE[NP]VV;{[CP]|[EA]}{M(Oxidation (M))|F}EH[NP]VV;{[YC]|[HE]}{M(Oxidation (M))|F}AE[NP]VV;[NP]SWE[NP]VV;[{M(Oxidation (M))|F}E]HAE[NP]VV;[PG]GSWE[NP]VV;[NP]VC[PG]G{[CP]|[EA]}VV;[NP]VC[PG]GV{[CP]|[EA]}V 4.3141;4.1982;3.8707;3.7988;3.3326;3.3038;3.2769;3.1837;3.0508;2.9485 -;-;-;+;-;-;-;-;-;- + 1635 1 1.569 73746.9 1.0 4879 5300 10175 HBL1_DMSO_200M_050219_1,10181 HBL1_DMSO_200M_050219_1,10181,EAFEHPNVV True True EAFEHPNVV 53.177845 521.253832995892 38149592.0 10175.0 ENSG00000135446|ENST00000257904|CDK4;;ENST00000551706.1_1_12:58145281-58145962:-|nuORF 7.549407323201497 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10182 53.18 100.0 1377000.0 25 0 436560.0 + 24408 MFQNRVRPL 9 70 580.8201570176382 1159.6257611020762 2 580.8217040896416 MULTI CID FTMS 0 0 0 10175 765542.5 0.2483678748554951 -2 0.2211418151855468 7 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 42.09456458481378 0.0639583784996157 3 VR[{I|L}P] 4 5 22.224 0.0 0.0 1.9164 0.0 0.0 676.3078727737544 0.0 676.3078727737544 0.0 7.518572025801545 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 + VR[{I|L}P] 1.9164 + + 26 + 1 1.569 108976.4 1.0 4880 5300 10175 HBL1_DMSO_200M_050219_1,10182 HBL1_DMSO_200M_050219_1,10182,MFQNRVRPL True True MFQNRVRPL 53.180013 580.821704089642 508546168.0 10175.0 ENST00000564557.1_1_16:58633371-58663636:-|nuORF 6.870609283447266 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10183 53.181 52.0 978650.0 25 0 163520.0 + 21270 LPEDKPRLI 9 62 360.88533721187406 1079.6341822358222 3 360.8845397830009 MULTI CID FTMS 0 0 0 10175 711613.25 0.0648781192041218 6 -0.7185211181640625 8 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 12.240655878213236 0.5053430591993562 3 {I|L}PEDK 5 4 36.938 0.0 0.0 3.4214 0.0 0.0 0.0 494.3096738954478 494.3096738954478 10.996075289514096 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 + {I|L}PEDK 3.4214 + + 39 + 1 1.569 51532.7 1.0 4881 5300 10175 HBL1_DMSO_200M_050219_1,10183 HBL1_DMSO_200M_050219_1,10183,LPEDKPRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10184 53.183 67.0 664820.0 25 0 36024.0 + 31878 RTLDSVSQI 9 77 509.7783629833229 1017.5421730334458 2 509.7794372439384 MULTI CID FTMS 0 0 0 10175 517856.0625 0.4226507568153269 2 -0.2223358154296875 9 Unmodified _RTLDSVSQI_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B 20.41453444215458 0.284085796332423 3 {[QN]|[E{I|L}]|[KN]}SRSVSQ{I|L} 9 4 + 60.455 0.0 0.0 5.9413 5.9413 87.609 0.0 0.0 0.0 4.137342758552691 50.723506410013215 4.137342758552691 9.208187539523747 0 0.3807196863200844 0.0 0.805462187404089 0.0 {[QN]|[E{I|L}]|[KN]}SRSVSQ{I|L};{[QN]|[E{I|L}]|[KN]}SRSVS[AG]{I|L};{[QN]|[E{I|L}]|[KN]}S[VG]SVSQ{I|L};{[QN]|[E{I|L}]|[KN]}S[VG]SVS[AG]{I|L};{[QN]|[E{I|L}]|[KN]}SRS[WK]{I|L};{[QN]|[E{I|L}]|[KN]}SRS[WQ]{I|L};{[QN]|[E{I|L}]|[KN]}S[VG]S[WK]{I|L};{[QS]|[NT]}{[QV]|[N{I|L}]|[RA]|[KV]}[KT]SQ{I|L};[Q{I|L}][NS][KT]SQ{I|L};{[QN]|[E{I|L}]|[KN]}SRS[PA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 5.9413;5.0364;5.0364;4.1357;3.6795;3.6795;2.7692;2.2571;2.039;1.9262 -;-;-;-;-;-;-;-;-;- 200 1 1.569 41836.8 1.0 4882 5300 10175 HBL1_DMSO_200M_050219_1,10184 HBL1_DMSO_200M_050219_1,10184,RTLDSVSQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10185 53.185 112.0 569020.0 25 0 69798.0 + 35400 STHEFLHEV 9 113 366.8455080945349 1097.5146948838049 3 366.8454162478447 MULTI CID FTMS 0 0 0 10175 434644.90625 0.7208675908566167 -1 0.1019973754882812 10 Unmodified _STHEFLHEV_ ENSG00000215305|ENST00000380445|VPS16 51.41523569358685 0.0372669606867193 3 STHE{M(Oxidation (M))|F}{I|L}HEV 9 0 + 52.961 0.0 0.0 4.8255 4.8255 86.93 0.0 0.0 0.0 28.16238913910201 9.194799068400847 9.194799068400847 22.70812200728861 0 1.1989700043360187 0.619788758288394 0.805462187404089 0.0 + + STHE{M(Oxidation (M))|F}{I|L}HEV;[W{M(Oxidation (M))|F}]HM{I|L}HEV;[W{M(Oxidation (M))|F}]H{I|L}MHEV;STHE[VP][RD]AS;STHE[VP]{[RE]|[WV]}GS;S[{M(Oxidation (M))|F}V]H{I|L}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}V;[W{M(Oxidation (M))|F}]H{I|L}{M(Oxidation (M))|F}[WY];[W{M(Oxidation (M))|F}]H{I|L}{M(Oxidation (M))|F}[HD]P;[W{M(Oxidation (M))|F}]NQR[HN]P;[W{M(Oxidation (M))|F}]H{I|L}[QP]{[CA]|SS}P 4.8255;2.7565;2.4578;1.9248;1.8638;1.5488;1.3234;0.89248;0.49855;0.10956 +;-;-;-;-;-;-;-;-;- + 547 + 1 1.569 54862.5 1.0 4883 5300 10175 HBL1_DMSO_200M_050219_1,10185 HBL1_DMSO_200M_050219_1,10185,STHEFLHEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10186 53.188 130.0 275780.0 25 0 46266.0 -1 VVCMCDFESRQ 11 69 695.2829270292444 1388.5513011252888 2 695.2846557497978 MULTI CID FTMS 0 0 0 10175 315877.3125 0.8812067387586374 -1 0.1019973754882812 11 Carbamidomethyl (C),Oxidation (M) _VVC(Carbamidomethyl (C))M(Oxidation (M))CDFESRQ_ ENSG00000137075|ENST00000259605|RNF38;nc|ENSG00000137075|Q9H0F5-2|RNF38;nc|ENSG00000137075|Q9H0F5-3|RNF38;nc|ENSG00000137075|Q9H0F5-4|RNF38;nc|ENSG00000137075|Q9H0F5-5|RNF38 8.745405648335112 0.8338865417133445 3 {[QV]|[N{I|L}]|[RA]|[KV]}Y 3 -1 17.235 0.0 0.0 1.2412 0.0 0.0 0.0 995.33966717437 995.33966717437 2.286881741466619 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}Y 1.2412 - 45 1 1.569 33041.1 1.0 4884 5300 10175 HBL1_DMSO_200M_050219_1,10186 HBL1_DMSO_200M_050219_1,10186,VVCMCDFESRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10187 53.192 220.0 362880.0 25 0 65553.0 + 24908 MPPDPRPTL 9 97 512.268184858621 1022.521816784042 2 512.2692138552666 MULTI CID FTMS 0 0 0 10175 289560.15625 0.3855093974188884 4 -0.3911399841308594 12 Unmodified _MPPDPRPTL_ ENST00000465017.5_1_9:139685822-139687379:+|nuORF;ENST00000483187.5_1_9:139685862-139687379:+|nuORF 16.149105407346934 0.3995459350917656 3 MPPDA 5 5 59.821 0.0 0.0 5.8503 0.0 0.0 0.0 508.2754000299438 508.2754000299438 46.17545637883161 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 MPPDA 5.8503 - 100 + 1 1.569 70558.5 1.0 4885 5300 10175 HBL1_DMSO_200M_050219_1,10187 HBL1_DMSO_200M_050219_1,10187,MPPDPRPTL False True MPPDPRPTL 53.192144 512.269213855267 40595325.0 10175.0 ENST00000483187.5_1_9:139685862-139687379:+|nuORF;;ENST00000465017.5_1_9:139685822-139687379:+|nuORF 6.191740353902181 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10188 53.195 146.0 561280.0 25 0 58237.0 -1 0 107 578.338957938097 577.331681471497 1 578.3397704958916 MULTI CID FTMS 0 0 0 10175 263407.5 1.0 0 0.0 13 3 [Y{I|L}]Q 3 -1 21.427 0.0 0.0 3.7113 0.0 0.0 0.0 170.10314078229695 170.10314078229695 10.713337517843655 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}]Q 3.7113 - 36 1 1.569 65379.9 1.0 4886 5300 10175 HBL1_DMSO_200M_050219_1,10188 HBL1_DMSO_200M_050219_1,10188, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10189 53.199 195.0 574320.0 25 0 67179.0 + 37050 TGFSPRQI 8 121 453.2454977186477 904.4764425040954 2 453.2459594607353 MULTI CID FTMS 0 0 0 10175 243035.96875 0.0064826913417931 -6 0.6761512756347656 14 Unmodified _TGFSPRQI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 30.63653989081413 0.3996269429323407 3 TG{M(Oxidation (M))|F}S{I|L} 5 3 60.918 0.0 0.0 6.7351 0.0 0.0 0.0 396.20182618202654 396.20182618202654 48.44335023848103 0.0 0.0 0.0 0 1.048455006504028 1.3979400086720375 0.0 0.0 TG{M(Oxidation (M))|F}S{I|L} 6.7351 - 151 + 1 1.569 90547.3 1.0 4887 5300 10175 HBL1_DMSO_200M_050219_1,10189 HBL1_DMSO_200M_050219_1,10189,TGFSPRQI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10190 53.204 288.0 319700.0 25 0 19835.0 + 44493 YPASIVHQV 9 136 507.2742830540504 1012.5340131749008 2 507.2738830447197 MULTI CID FTMS 0 0 0 10175 242683.46875 0.1652629299003698 -6 0.6761512756347656 15 Unmodified _YPASIVHQV_ ENSG00000064393|ENST00000406875|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2 53.832793166522166 0.0319663582346103 3 YPAS{I|L}VHN{I|L} 9 2 + 82.718 0.0 0.0 8.1694 8.1694 83.461 0.0 0.0 0.0 36.47817481888637 1.249387366082999 1.249387366082999 1.249387366082999 0 1.0387254899964358 2.0 0.0 0.6747425010840047 YPAS{I|L}VHN{I|L};YPAS{I|L}VHQV;YPAS{I|L}VHGG{I|L};YPAS{I|L}VH[AG]V;VTMS{I|L}VHN{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R[HK]A{[QN]|[E{I|L}]|[KN]};YPA[DV]VP[PG]V;VTMS{I|L}VHQV;YPA[DV]VP[VG]P;{NN|[MP]|[D{I|L}]|[EV]}[RP]{I|L}SA{[QN]|[E{I|L}]|[KN]} 8.1694;8.046;6.5936;6.4702;3.6827;3.6559;3.5834;3.5593;3.1594;2.9246 -;+;-;-;-;-;-;-;-;- + 792 + 1 1.569 79693.2 1.0 4888 5300 10175 HBL1_DMSO_200M_050219_1,10190 HBL1_DMSO_200M_050219_1,10190,YPASIVHQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10191 53.21 328.0 567470.0 25 0 47972.0 -1 LPLQMYLR 8 186 350.5310555953264 1048.5713373861793 3 350.5308715701103 MULTI CID FTMS 0 0 0 10175 239158.5625 1.0 0 0.0 16 Oxidation (M) _LPLQM(Oxidation (M))YLR_ ENST00000320431.7_1_3:49756545-49756929:-|nuORF 19.256988751693697 0.6264283240490721 3 [HA]YKVY{I|L}R 8 -1 + 44.268 0.0 0.0 4.2217 4.2217 73.106 0.0 0.0 0.0 2.174617874626037 3.1292921896368853 2.174617874626037 1.9181547698837988 0 1.1549471895720984 0.0 0.0 0.7134679910804405 [HA]YKVY{I|L}R;[HA]YKV{I|L}YR;[HA]YKVYR{I|L};[HA]YK{I|L}VYR;[HA]YK{I|L}[YR]V;[HA][RH]PY{I|L}R;[HA][RH]P{I|L}YR;[HA][RH]PYR{I|L} 4.2217;4.0388;3.9233;3.3466;1.7577;1.6653;1.4824;1.3669 -;-;-;-;-;-;-;- 177 + 1 1.569 157503.3 1.0 4889 5300 10175 HBL1_DMSO_200M_050219_1,10191 HBL1_DMSO_200M_050219_1,10191,LPLQMYLR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10192 53.224 779.0 155160.0 25 0 12690.0 10305 FSCRFTHYFYF 11 94 759.3349734516509 1516.6553939701016 2 759.3351928591728 MULTI CID FTMS 0 0 0 10175 198361.8125 1.0 0 0.0 17 Unmodified _FSCRFTHYFYF_ ENSG00000166856|ENST00000300098|GPR182 11.494710602746466 0.7960433852372589 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP]DEAQQNA{M(Oxidation (M))|F}Y 13 10 + 70.681 0.0 0.0 4.6603 4.6603 82.367 0.0 0.0 0.0 9.318141382538371 24.069621457992447 9.318141382538371 9.072459467631006 0 0.7742275032520141 1.3979400086720375 0.0 0.8494850021680094 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP]DEAQQNA{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP]DEAQQGGA{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP]DEAQ[AG]NA{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP]DEA[AG]QNA{M(Oxidation (M))|F}Y;[TP]PHDEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQW[{M(Oxidation (M))|F}T]QNA{M(Oxidation (M))|F}Y;[EP]TWQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQW[{M(Oxidation (M))|F}T]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QS]|[NT]}EAQQNA{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP]DEAQQWT[HA] 4.6603;4.0621;4.0621;4.0621;4.042;3.9139;3.8474;3.8295;3.8239;3.7529 -;-;-;-;-;-;-;-;-;- 2712 1 1.569 90259.2 1.0 4890 5300 10175 HBL1_DMSO_200M_050219_1,10192 HBL1_DMSO_200M_050219_1,10192,FSCRFTHYFYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10193 53.237 800.0 176910.0 25 0 10988.0 + + -1 SAVSAVAAV 9 137 774.3934802626757 1546.7724075921512 2 774.3956176638603 MULTI CID FTMS 0 0 0 10175 175051.78125 1.0 0 0.0 18 Carbamidomethyl (C) _DRWLWEVKC(Carbamidomethyl (C))QK_ ENST00000557314.5_1_14:20839728-20850189:-|nuORF;ENSG00000129566|ENST00000262715|TEP1;nc|ENSG00000129566|Q99973-2|TEP1 2.735195868890462 0.8622431031272658 3 {I|L}EAVSAETTEDA{I|L}AK 15 -1 + 121.19 0.0 0.0 7.8348 7.8348 88.793 0.0 0.0 0.0 24.114459258636828 5.217330274176774 5.217330274176774 5.217330274176774 0 1.424742501084005 1.6989700043360187 0.8494850021680094 0.8703715150305281 {I|L}EAVSAETTEDA{I|L}AK;{I|L}EAVSAE[YV]AVPNSV;{I|L}EAVSAE[YV]AVP[DG]K;{I|L}EAVSAE[YV]VAPNSV;{I|L}EAVSAE[YV]VAP[DG]K;{I|L}EAVSAET[MT]VPNSV;{I|L}EAVSAET[MT]VP[DG]K;{I|L}EAVSAETT[WE]{I|L}AK;{I|L}EAVSAE[YV]AVPGGSV;{I|L}EAWAETTEDA{I|L}AK 7.8348;7.4975;7.4754;7.1654;7.1433;7.0282;7.0062;6.9216;6.9136;6.8531 -;-;-;-;-;-;-;-;-;- 18646 + 1 1.569 101192.1 0.949999988079071 4891 5300 10175 HBL1_DMSO_200M_050219_1,10193 HBL1_DMSO_200M_050219_1,10193,DRWLWEVKCQK False False SAVSAVAAV 53.237392 774.39561766386 332890.6875 10175.0 ENST00000557314.5_1_14:20839728-20850189:-|nuORF;;ENSG00000129566|ENST00000262715|TEP1;;nc|ENSG00000129566|Q99973-2|TEP1 0.8807782133420309 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10194 53.24 121.0 379900.0 25 0 37418.0 + 99 AAIGALQEA 9 86 422.2319419825649 842.4493310319298 2 422.2319824099541 MULTI CID FTMS 0 0 0 10175 169992.3125 0.6777274968722209 -1 0.1019973754882812 19 Unmodified _AAIGALQEA_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000268799|ENST00000600799|H3Y2;ENSG00000269466|ENST00000598383|H3Y1;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF 42.96799951952854 0.0591636306142405 3 AAVAA{I|L} 6 5 27.625 0.0 0.0 3.2791 0.0 0.0 0.0 343.1249651474173 343.1249651474173 7.05136871872881 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 AAVAA{I|L} 3.2791 - 188 1 1.569 41429.6 1.0 4892 5300 10175 HBL1_DMSO_200M_050219_1,10194 HBL1_DMSO_200M_050219_1,10194,AAIGALQEA True True AAIGALQEA 53.239888 422.231982409954 2019468.75 10175.0 ENSG00000269466|ENST00000598383|H3Y1;;ENSG00000163041|ENST00000366815|H3-3A;;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000268799|ENST00000600799|H3Y2;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF 3.3197094599405923 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10195 53.255 800.0 242270.0 25 0 15752.0 + + 37887 ATLTLVHQA 9 204 477.2742813394386 952.5340097456772 2 477.2742797732353 MULTI CID FTMS 0 0 0 10175 150268.625 0.3802882018504327 2 -0.2223358154296875 20 Unmodified _TLWAPVLGP_ nc|ENSG00000089737|Q9GZR7-2|DDX24;ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 16.942295170755138 0.3780752226737986 3 [{I|L}P]GW{I|L}T{I|L}GP 9 -1 + 36.144 0.0 0.0 3.7945 3.7945 75.079 0.0 0.0 0.0 3.9246644426853408 3.91552634866806 3.91552634866806 3.9246644426853408 0 0.2832805464156253 1.6989700043360187 0.0 0.0 [{I|L}P]GW{I|L}T{I|L}GP;[TA]{I|L}T{I|L}VHQA;[TA]{I|L}T{I|L}V[QA]H;[{I|L}P]GT[W{I|L}]{I|L}GP;[VP]AW{I|L}T{I|L}GP;[TA]{I|L}T{I|L}VH[AG]A;[PG]{I|L}W{I|L}T{I|L}GP;{[VA]|[{I|L}G]}PW{I|L}T{I|L}GP;[PA]WV{I|L}T{I|L}GP;[VP]AT[W{I|L}]{I|L}GP 3.7945;3.3825;2.7994;2.671;2.309;2.2961;1.894;1.6178;1.5414;1.1856 -;-;-;-;-;-;-;-;-;- 806 1 1.569 147752.8 0.949999988079071 4893 5300 10175 HBL1_DMSO_200M_050219_1,10195 HBL1_DMSO_200M_050219_1,10195,TLWAPVLGP False False ATLTLVHQA 53.255176 477.274279773235 2362065.0 10175.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 5.386232376098633 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10197 53.26 14.0 6499300.0 25 0 582950.0 + 2151 APYPTPAQV 9 98 472.24781435238816 942.4810757715765 2 472.2478820681572 MULTI CID FTMS 0 0 0 10196 3672756.75 0.7439954798217615 1 -0.134246826171875 1 Unmodified _APYPTPAQV_ ENSG00000198807|ENST00000361487|PAX9 81.86404211737425 0.017065112157077 3 [PA]TPYPAQV 9 2 + 64.963 0.0 0.0 6.8927 6.8927 88.854 0.0 0.0 0.0 7.956510199829204 9.889917747712644 7.956510199829204 7.956510199829204 0 0.9291746928241124 1.2218487496163564 1.360924374808178 0.0 [PA]TPYPAQV;[TP]PAYPAQV;[TP]APYPAQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PTAPAQV;[PA]YPTPAQV;[TP]PYAPAQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TPAPAQV;[TP]YPAPAQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PATPAQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APTPAQV 6.8927;6.0485;6.0228;5.5421;5.5244;5.4564;5.4393;5.382;4.7118;4.7118 -;-;-;-;+;-;-;-;-;- + 1556 1 1.604 73098.4 1.0 4894 5301 10196 HBL1_DMSO_200M_050219_1,10197 HBL1_DMSO_200M_050219_1,10197,APYPTPAQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10198 53.261 23.0 4500100.0 25 0 637680.0 + 21894 LPPEYASTV 9 94 488.7531214727471 975.4916900122944 2 488.7530395388603 MULTI CID FTMS 0 0 0 10196 2712547.0 0.6008873484779427 3 -0.3030509948730469 2 Unmodified _LPPEYASTV_ ENSG00000178913|ENST00000313368|TAF7 36.04419817259434 0.0971720506436186 3 [{I|L}P]PEYA{[WT]|[RM]} 8 2 + 31.092 0.0 0.0 3.1874 3.1874 75.602 0.0 0.0 0.0 6.47817481888638 6.989700043360188 6.47817481888638 5.740312677277188 0 0.0 2.0 0.0 0.0 [{I|L}P]PEYA{[WT]|[RM]};[{I|L}P]P{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{[WT]|[RM]};[EP]YAP{I|L}{[WT]|[RM]};[EP]PHP{I|L}{[WT]|[RM]};[EP]YPA{I|L}{[WT]|[RM]};[EP]PYA{I|L}{[WT]|[RM]};{[HG]|PP}EHP{I|L}{[WT]|[RM]};[EP]YP{I|L}A{[WT]|[RM]};[EP]PY{I|L}A{[WT]|[RM]};{[HG]|PP}EYA{I|L}{[WT]|[RM]} 3.1874;2.5989;2.5233;2.5233;2.3952;2.3952;2.1622;2.0866;2.0866;2.0342 -;-;-;-;-;-;-;-;-;- 890 1 1.604 83756.5 1.0 4895 5301 10196 HBL1_DMSO_200M_050219_1,10198 HBL1_DMSO_200M_050219_1,10198,LPPEYASTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10199 53.262 25.0 4453800.0 25 0 687600.0 + 22015 LPPPPPPAM 9 98 458.7515933437354 915.4886337542708 2 458.7516967654228 MULTI CID FTMS 0 0 0 10196 2374402.5 0.3392630965826466 7 -0.8745765686035156 3 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 93.76273176245871 0.0134559174279925 3 [{I|L}P]PPPPPAM 9 0 + 68.744 0.0 0.0 7.509 7.509 93.986 0.0 0.0 0.0 42.8146933051946 9.31417813229345 9.31417813229345 13.222192947339195 0 2.3494850021680094 1.6989700043360187 0.0 0.0 + + [{I|L}P]PPPPPAM;[{I|L}P]PPPPPCV;[{I|L}P][YK]PPAM;[{I|L}P]P[YK]PAM;[{I|L}P]PP[YK]AM;[{I|L}P][YK]PPCV;[{I|L}P]P[YK]PCV;[{I|L}P][QA]{M(Oxidation (M))|F}P{I|L}M;[{I|L}P]PA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}M;[{I|L}P]PP[YK]CV 7.509;6.0647;5.2507;5.1685;4.9762;3.8065;3.7243;3.6089;3.5665;3.5319 +;-;-;-;-;-;-;-;-;- + 610 + 1 1.604 90543.5 1.0 4896 5301 10196 HBL1_DMSO_200M_050219_1,10199 HBL1_DMSO_200M_050219_1,10199,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10200 53.265 131.0 847600.0 25 0 66767.0 + 6583 EANPAVPEV 9 120 463.23454392085966 924.4545349085192 2 463.2350952029228 MULTI CID FTMS 0 0 0 10196 654632.1875 0.909339405253066 1 -0.134246826171875 4 Unmodified _EANPAVPEV_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 92.4914307365334 0.0139747738690111 3 [EP]NAAV 6 5 52.146 0.0 0.0 5.6408 0.0 0.0 0.0 340.1510791946079 340.1510791946079 22.98963451112506 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.2059771852360797 0.7742275032520141 [EP]NAAV 5.6408 - 547 1 1.604 88863.2 1.0 4897 5301 10196 HBL1_DMSO_200M_050219_1,10200 HBL1_DMSO_200M_050219_1,10200,EANPAVPEV True True EANPAVPEV 53.264559 463.235095202923 6619811.0 10196.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 6.955750624338786 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10201 53.266 56.0 589190.0 25 0 45600.0 + 32191 RVVDELDNQM 10 61 609.7926304810543 1217.5707080289085 2 609.7916137576103 MULTI CID FTMS 0 0 0 10196 622932.5 0.0190349586936362 4 -0.5077857971191406 5 Unmodified _RVVDELDNQM_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 24.881564428377168 0.4096545554397951 3 [YG]{I|L}[HK]{I|L}DNQM 10 5 + 61.687 0.0 0.0 5.0664 5.0664 75.701 0.0 0.0 0.0 1.829306835859868 13.80674456733729 1.829306835859868 1.829306835859868 0 0.3494850021680094 1.154901959985743 0.0 0.4247425010840047 [YG]{I|L}[HK]{I|L}DNQM;[RV]VDE{I|L}DNQM;[YG]{I|L}[HK]{I|L}DGGQM;[YG]{I|L}[HK]{I|L}DN[AG]M;[RV]VDE{I|L}DGGQM;[RV]VDE{I|L}DN[AG]M;[YN]ND{I|L}[HK]{I|L}AM;[RV]VDE{I|L}DGG[AG]M;[YN]GGD{I|L}[HK]{I|L}AM 5.0664;4.9162;4.3137;4.3137;4.1635;4.1635;3.9324;3.4137;3.1798 -;+;-;-;-;-;-;-;- + 127 1 1.604 30835.6 1.0 4898 5301 10196 HBL1_DMSO_200M_050219_1,10201 HBL1_DMSO_200M_050219_1,10201,RVVDELDNQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10202 53.27 183.0 809000.0 25 0 70027.0 + 26480 NTMPRVTEM 9 139 539.7541953353738 1077.4938377375474 2 539.7545043826103 MULTI CID FTMS 0 0 0 10196 350004.65625 0.3078002414001207 -2 0.1900863647460937 6 Unmodified _NTMPRVTEM_ ENSG00000105325|ENST00000441788|FZR1;ENST00000588327.1_1_19:3506419-3526183:+|nuORF;nc|ENSG00000105325|Q9UM11-3|FZR1;nc|ENSG00000105325|Q9UM11|FZR1 36.506200033944 0.094635877243972 3 {[QS]|[NT]}M 3 6 36.474 0.0 0.0 3.3851 0.0 0.0 0.0 728.3401871850662 728.3401871850662 -2.6880575102180444 0.0 -2.6880575102180444 0.0 0 0.9247425010840048 1.3979400086720375 0.7887254899964358 0.1803115997617927 + {[QS]|[NT]}M 3.3851 + + 1037 1 1.604 120085.8 1.0 4899 5301 10196 HBL1_DMSO_200M_050219_1,10202 HBL1_DMSO_200M_050219_1,10202,NTMPRVTEM True True NTMPRVTEM 53.269551 539.75450438261 12442606.0 10196.0 nc|ENSG00000105325|Q9UM11|FZR1;;ENST00000588327.1_1_19:3506419-3526183:+|nuORF;;ENSG00000105325|ENST00000441788|FZR1;;nc|ENSG00000105325|Q9UM11-3|FZR1 2.8087111910184226 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10203 53.272 97.0 1028700.0 25 0 76456.0 + 35401 STHEFLHEV 9 140 549.7645116385747 1097.5144703439494 2 549.7646972537041 MULTI CID FTMS 0 0 0 10196 336877.15625 1.0 0 0.0 7 Unmodified _STHEFLHEV_ ENSG00000215305|ENST00000380445|VPS16 71.70789743142352 0.0204387454931768 3 [HT]SE{M(Oxidation (M))|F}{I|L}HEV 9 2 + 73.36 0.0 0.0 6.6842 6.6842 78.988 0.0 0.0 0.0 0.6427143043856205 16.478174818886366 0.6427143043856205 0.6427143043856205 0 1.4876954943324543 0.0 0.5629529932484498 0.0 [HT]SE{M(Oxidation (M))|F}{I|L}HEV;{[MG]|[TS]}HE{M(Oxidation (M))|F}{I|L}HEV;{[YC]|[HE]}{[MG]|[TS]}{M(Oxidation (M))|F}{I|L}HEV;{NN|[MP]|[D{I|L}]|[EV]}G[C(Carbamidomethyl (C))R]{I|L}HEV;{[YC]|[HE]}{M(Oxidation (M))|F}{[MG]|[TS]}{I|L}HEV;{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}{[MG]|[TS]}HEV;{NN|[MP]|[D{I|L}]|[EV]}GPN{[MS]|[{M(Oxidation (M))|F}A]}HEV;{[MG]|[TS]}P[C(Carbamidomethyl (C))R]{I|L}HEV;{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}H{[MG]|[TS]}EV;{NN|[MP]|[D{I|L}]|[EV]}G[DV][KS]HEV 6.6842;6.6256;5.0567;4.6248;4.1897;3.6656;3.6242;3.4529;3.21;3.0315 -;+;-;-;-;-;-;-;-;- + 805 1 1.604 78219.6 1.0 4900 5301 10196 HBL1_DMSO_200M_050219_1,10203 HBL1_DMSO_200M_050219_1,10203,STHEFLHEV True True STHEFLHEV 53.271659 549.764697253704 6256143.5 10196.0 ENSG00000215305|ENST00000380445|VPS16 8.175431251525879 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10204 53.283 647.0 620920.0 25 0 38147.0 + -1 VLMDGCQSI 9 239 491.2219014427378 980.4292499522757 2 491.2211791872978 MULTI CID FTMS 0 0 0 10196 297732.09375 0.9711866018748656 3 -0.3030509948730469 8 Oxidation (M) _VLM(Oxidation (M))DGCQSI_ REV__CYP3A43|p.N251Kfs*4|1|0.25|ENSG00000021461|chr7:99855666-99855667|-/A|frameshift_variant;REV__ENSG00000021461|ENST00000354829|CYP3A43;REV__nc|ENSG00000021461|Q9HB55-2|CYP3A43;REV__nc|ENSG00000021461|Q9HB55-3|CYP3A43;REV__nc|ENSG00000021461|Q9HB55-4|CYP3A43 23.1484247019978 0.2366544122328345 3 VE{M(Oxidation (M))|F}YY{M(Oxidation (M))|F}N 7 -1 + 25.204 0.0 0.0 2.5707 2.5707 66.629 0.0 0.0 0.0 11.646358862353368 0.3476210625921219 0.3476210625921219 0.3476210625921219 0 0.2346368802282017 1.3979400086720375 0.0 0.6694451763165201 VE{M(Oxidation (M))|F}YY{M(Oxidation (M))|F}N;VE{M(Oxidation (M))|F}YYN{M(Oxidation (M))|F};VE{M(Oxidation (M))|F}[RN]DCV;VQ{[DS]|[MA]|[CV]|TT}[NS]A{M(Oxidation (M))|F}N;VQ{[DS]|[MA]|[CV]|TT}[NS]AN{M(Oxidation (M))|F};VE{M(Oxidation (M))|F}[RN]DMA;VQ{[DS]|[MA]|[CV]|TT}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}C(Carbamidomethyl (C)){I|L};VE{M(Oxidation (M))|F}YYGG{M(Oxidation (M))|F};VE{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]CAP;VE{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]CPA 2.5707;2.5353;2.506;1.5875;1.5521;1.3631;1.3147;1.0804;1.0609;0.94671 -;-;-;-;-;-;-;-;-;- 974 + 1 1.604 305142.1 1.0 4901 5301 10196 HBL1_DMSO_200M_050219_1,10204 HBL1_DMSO_200M_050219_1,10204,VLMDGCQSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10205 53.295 672.0 390210.0 25 0 41592.0 + 21680 LPLPDQIR 8 207 476.28487125370367 950.5551895742074 2 476.2842895388603 MULTI CID FTMS 0 0 0 10196 290470.875 0.4915588929254537 -10 1.0765151977539062 9 Unmodified _LPLPDQIR_ ENST00000481170.1_1_2:220370207-220370552:+|nuORF;nc|ENSG00000144591|Q96IJ6-2|GMPPA 25.399314129420983 0.5099049743284904 3 {I|L}PPEVQR{I|L} 8 5 + 59.245 0.0 0.0 6.2327 6.2327 89.105 0.0 0.0 0.0 47.25554263217453 2.2627204979725093 2.2627204979725093 9.262137858390815 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {I|L}PPEVQR{I|L};{I|L}PPEV[AG]R{I|L};{I|L}P{I|L}[DP]QR{I|L};{I|L}P{I|L}[DP][AG]R{I|L};{I|L}P{I|L}[HK]{[MG]|[TS]}GV;{I|L}P[HK]{[MG]|[TS]}R{I|L};{I|L}P[HK]{I|L}{[MG]|[TS]}GV;{I|L}{I|L}P[DP]QR{I|L};{I|L}{I|L}P[DP][AG]R{I|L};{I|L}{I|L}P[HK]{[MG]|[TS]}GV 6.2327;5.2583;5.1518;4.1774;3.885;3.8112;3.5669;2.2843;1.3099;1.0174 -;-;-;-;-;-;-;-;-;- 621 + 1 1.604 201427.0 1.0 4902 5301 10196 HBL1_DMSO_200M_050219_1,10205 HBL1_DMSO_200M_050219_1,10205,LPLPDQIR False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 10206 53.307 687.0 265920.0 25 0 20284.0 + 18133 KTLTTVQGI 9 184 480.790390623687 959.566228314174 2 480.7906371951103 MULTI CID FTMS 0 0 0 10196 295325.15625 1.0 0 0.0 10 Unmodified _KTLTTVQGI_ ENSG00000114784|ENST00000232905|EIF1B;ENSG00000173812|ENST00000469257|EIF1;ENST00000462088.1_1_3:40351432-40352571:+|nuORF;ENST00000488260.1_1_3:40351432-40353086:+|nuORF 53.40400417844725 0.0329064971918313 3 GS{I|L}TTVQG{I|L} 9 2 54.649 0.0 0.0 5.6952 0.0 0.0 85.08986098457187 0.0 85.08986098457187 0.0 20.22128045724097 0.0 0.0 0 0.805462187404089 0.0 1.8193415193665468 0.0 GS{I|L}TTVQG{I|L} 5.6952 - 2041 1 1.604 140519.5 1.0 4903 5301 10196 HBL1_DMSO_200M_050219_1,10206 HBL1_DMSO_200M_050219_1,10206,KTLTTVQGI True True KTLTTVQGI 53.306542 480.79063719511 1411299.125 10196.0 ENSG00000114784|ENST00000232905|EIF1B;;ENSG00000173812|ENST00000469257|EIF1;;ENST00000488260.1_1_3:40351432-40353086:+|nuORF;;ENST00000462088.1_1_3:40351432-40352571:+|nuORF 5.001566727956136 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10207 53.319 703.0 206510.0 25 0 24480.0 39702 VEGLRVFDKES 11 113 639.8374982544077 1277.660443575615 2 639.8377563357353 MULTI CID FTMS 0 0 0 10196 244975.25 0.0392834787383148 4 -0.5077857971191406 11 Unmodified _VEGLRVFDKES_ ENSG00000198336|ENST00000393450|MYL4 16.149105407346934 0.6992268271266642 3 [TP]SVVAVTV 9 10 65.275 0.0 0.0 5.1089 0.0 0.0 0.0 421.1459531793841 421.1459531793841 23.61728580031973 0.0 0.0 0.0 0 0.0 0.6020599913279624 2.693672679568534 0.0 [TP]SVVAVTV 5.1089 - 1700 1 1.604 110577.9 1.0 4904 5301 10196 HBL1_DMSO_200M_050219_1,10207 HBL1_DMSO_200M_050219_1,10207,VEGLRVFDKES False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10208 53.323 207.0 611720.0 25 0 54502.0 + -1 LTPERFHNL 9 153 376.2056456834477 375.19836921684765 1 376.2057372927666 MULTI CID FTMS 0 0 0 10196 229495.546875 1.0 0 0.0 12 ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 3 W 1 -1 10.713 0.0 0.0 2.8554 0.0 0.0 171.1082488328617 0.0 171.1082488328617 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.8554 - 38 + 1 1.604 105532.1 1.0 4905 5301 10196 HBL1_DMSO_200M_050219_1,10208 HBL1_DMSO_200M_050219_1,10208, False False LTPERFHNL 53.322696 376.2053 2159606.75 10196.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 4.588075955708821 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10209 53.338 800.0 196520.0 25 0 15886.0 + -1 EWDRWMVRFY 10 118 752.3466597825005 1502.678766631801 2 752.3472778201103 MULTI CID FTMS 0 0 0 10196 201913.734375 1.0 0 0.0 13 Oxidation (M) _EWDRWM(Oxidation (M))VRFY_ REV__ENST00000558045.2_1_14:24608221-24608440:-|nuORF 6.723162845929126 0.6955379296933136 3 {[QG]|[NA]}G[YK]EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 77.912 0.0 0.0 5.1849 5.1849 83.136 0.0 0.0 0.0 8.068754016455387 10.696083918116416 8.068754016455387 7.711440694835829 0 0.8182503180159344 0.744727494896694 0.0 1.579689690656103 {[QG]|[NA]}G[YK]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE[YK]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YK]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[YK]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[YK]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[YK]EAQQGGA{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{I|L}]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQA[WY]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQE[YK]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQA[WY]QNA{M(Oxidation (M))|F}Y 5.1849;4.6717;4.6479;4.5811;4.5811;4.5811;4.5202;4.4268;4.338;4.3096 -;-;-;-;-;-;-;-;-;- 2394 1 1.604 114908.9 0.9700000286102296 4906 5301 10196 HBL1_DMSO_200M_050219_1,10209 HBL1_DMSO_200M_050219_1,10209,EWDRWMVRFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10210 53.352 800.0 128000.0 25 0 13771.0 + 5958 DQLCISFHHFP 11 102 672.3144265477721 1342.614300162344 2 672.3165161013603 MULTI CID FTMS 0 0 0 10196 197442.09375 0.2774307558955957 7 -0.8745765686035156 14 Unmodified _DQLCISFHHFP_ REV__ENST00000556103.1_1_14:23946657-23947232:+|nuORF 20.41453444215458 0.6105011870913812 3 QS{M(Oxidation (M))|F}SA 5 -1 25.36 0.0 0.0 1.8889 0.0 0.0 555.2665961601941 264.0989168756469 819.3655130358411 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9698565171985376 0.0 QS{M(Oxidation (M))|F}SA 1.8889 - 515 + 1 1.604 78403.4 0.9800000190734864 4907 5301 10196 HBL1_DMSO_200M_050219_1,10210 HBL1_DMSO_200M_050219_1,10210,DQLCISFHHFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10211 53.357 285.0 377490.0 25 0 17370.0 + 16522 KAQLDYVDL 9 168 532.7849061537099 1063.5552593742198 2 533.2894164919853 MULTI CID FTMS 0 0 0 10196 199895.234375 0.0058071697792851 14 -1.4112930297851562 15 Unmodified _KAQLDYVDL_ ENSG00000196139|ENST00000380554|AKR1C3;ENST00000480697.6_1_10:5136636-5139787:+|nuORF 32.30548876998284 0.1201446275138228 3 {[TV]|[{I|L}S]}H{I|L}[HM]VEV 9 7 + 22.07 0.0 0.0 2.0751 2.0751 70.207 0.0 0.0 0.0 1.6341585623902084 5.689460038699 1.6341585623902084 2.983324797206283 0 0.4876954943324546 0.9208187539523752 1.0114393726401687 0.0 {[TV]|[{I|L}S]}H{I|L}[HM]VEV;{[TV]|[{I|L}S]}HV[PG]QVEV;{[CP]|[EA]}NY[K{I|L}]VEV;{[TV]|[{I|L}S]}H{I|L}V[HM]EV;{NN|[MP]|[D{I|L}]|[EV]}W[{I|L}A]AY{[NV]|[RG]};[AG]GEY[K{I|L}]VEV;[{M(Oxidation (M))|F}V]VW[K{I|L}]C(Carbamidomethyl (C)){I|L};{[QG]|[NA]}EY[K{I|L}]VEV;[{M(Oxidation (M))|F}V]V[HM]{I|L}RY;[YK]{I|L}{[DA]|[EG]}QVEV 2.0751;1.7946;1.4427;1.3207;1.2585;1.2199;1.2199;1.1007;1.0973;1.0698 -;-;-;-;-;-;-;-;-;- 1508 1 1.604 90725.4 1.0 4908 5301 10196 HBL1_DMSO_200M_050219_1,10211 HBL1_DMSO_200M_050219_1,10211,KAQLDYVDL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10212 53.363 349.0 526580.0 25 0 35759.0 43514 WWWWIWWQWW 10 121 874.9047416285603 1747.7949303239204 2 875.4056274294853 MULTI CID FTMS 0 0 0 10196 150492.015625 1.0 0 0.0 16 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 3 [VP]S{I|L}HHS[YQ]N{I|L} 11 10 46.915 0.0 0.0 2.6843 0.0 0.0 0.0 469.1537866271335 469.1537866271335 25.48136732178956 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.3684151806525389 0.0 [VP]S{I|L}HHS[YQ]N{I|L} 2.6843 - 4272 1 1.604 125541.2 1.0 4909 5301 10196 HBL1_DMSO_200M_050219_1,10212 HBL1_DMSO_200M_050219_1,10212,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 10213 53.369 226.0 384040.0 25 0 23532.0 + -1 MKVVHCTL 8 127 502.2567519588164 1002.4989509844328 2 502.2568847537041 MULTI CID FTMS 0 0 0 10196 117501.21875 1.0 0 0.0 17 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))KVVHC(Carbamidomethyl (C))TL_ REV__ENSG00000115750|ENST00000263663|TAF1B;REV__nc|ENSG00000115750|Q53T94-2|TAF1B;REV__nc|ENSG00000115750|Q53T94-3|TAF1B 19.438996006549623 0.6237395211498085 3 {[QS]|[NT]}{[WN]|[YH]}{I|L}GW{I|L} 8 -1 {[QS]|[NT]}{[WN]|[YH]}{I|L}GW + + 13.099 9.1871 1.0543 1.3066 1.3066 48.465 0.0 0.0 0.0 0.0 -10.992756601966889 -10.992756601966889 0.0 0 0.0 0.0 0.0 0.0 {[QS]|[NT]}{[WN]|[YH]}{I|L}GW{I|L} 1.3066 - 491 + 1 1.604 69715.9 1.0 4910 5301 10196 HBL1_DMSO_200M_050219_1,10213 HBL1_DMSO_200M_050219_1,10213,MKVVHCTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10214 53.376 391.0 114530.0 25 0 4729.2 + -1 YMCIHTYIYT 10 92 682.8062036851076 1363.597854437015 2 683.3074218630791 MULTI CID FTMS 0 0 0 10196 109810.5390625 1.0 0 0.0 18 Carbamidomethyl (C) _YMC(Carbamidomethyl (C))IHTYIYT_ REV__ENST00000407010.6_2_7:16128723-16129239:-|nuORF 3.944395688203298 0.708391353636983 3 [EP]D[EP][{I|L}T]KT 9 -1 28.808 0.0 0.0 2.1126 0.0 0.0 0.0 350.0820847657366 350.0820847657366 16.58924985774086 0.0 0.0 0.0 0 0.9247425010840048 0.9208187539523752 0.3494850021680094 0.0 [EP]D[EP][{I|L}T]KT 2.1126 - 175 1 1.604 41454.1 1.0 4911 5301 10196 HBL1_DMSO_200M_050219_1,10214 HBL1_DMSO_200M_050219_1,10214,YMCIHTYIYT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10215 53.389 800.0 284010.0 25 0 29327.0 16046 ITKKEEVQQL 10 217 405.9040334840527 1214.6902710523582 3 405.9030639529228 MULTI CID FTMS 0 0 0 10196 95679.984375 1.0 0 0.0 19 Unmodified _ITKKEEVQQL_ ENSG00000231738|ENST00000532498|TSPAN19 10.898955630103616 0.6646681216928481 3 {[QN]|[E{I|L}]|[KN]}V 3 7 14.64 0.0 0.0 1.2052 0.0 0.0 0.0 870.4945162408811 870.4945162408811 1.0322176624646673 0.0 0.0 0.0 0 0.25 0.9208187539523752 0.0 0.0 {[QN]|[E{I|L}]|[KN]}V 1.2052 - 376 + 1 1.604 180954.0 0.5400000214576721 4912 5301 10196 HBL1_DMSO_200M_050219_1,10215 HBL1_DMSO_200M_050219_1,10215,ITKKEEVQQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10217 53.394 33.0 4061900.0 25 0 773110.0 + 41775 VPVGKVLKV 9 121 313.55147352012943 937.6325911605884 3 313.5512267947197 MULTI CID FTMS 0 0 0 10216 1594611.625 0.5407554209309922 1 -0.1217269897460937 1 Unmodified _VPVGKVLKV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 54.773552608820026 0.0299037012502309 3 VPV[KG]V{I|L}KV 9 0 + 69.973 0.0 0.0 7.4628 7.4628 86.397 0.0 0.0 0.0 36.47817481888637 3.881801713828821 3.881801713828821 3.881801713828821 0 0.9049471895720984 2.0 0.0 0.6643943297944485 + + VPV[KG]V{I|L}KV;VPV[KG]V{I|L}VK;VPVV[KG]{I|L}KV;VPVV[KG]{I|L}VK;VVP[KG]V{I|L}KV;VVP[KG]V{I|L}VK;VVPV[KG]{I|L}KV;VVPV[KG]{I|L}VK 7.4628;7.0488;6.9281;6.5141;5.1978;4.7838;4.6631;4.2491 +;-;-;-;-;-;-;- + 630 + 1 1.62 113147.0 1.0 4913 5302 10216 HBL1_DMSO_200M_050219_1,10217 HBL1_DMSO_200M_050219_1,10217,VPVGKVLKV True True VPVGKVLKV 53.393891 313.55122679472 125790600.0 10216.0 nc|ENSG00000104517|O95071-2|UBR5;;ENSG00000104517|ENST00000520539|UBR5 4.299295107523601 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10218 53.395 65.0 727880.0 25 0 124930.0 + 43691 YAYDGKDYLA 10 82 589.771785071062 1177.529017208924 2 589.7720214724541 MULTI CID FTMS 0 0 0 10216 742926.6875 0.2651415020142303 2 -0.1688041687011718 2 Unmodified _YAYDGKDYLA_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 23.78978130925829 0.4341852049148378 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}A 10 5 + 61.189 0.0 0.0 5.1964 5.1964 80.473 0.0 0.0 0.0 12.04119982655925 8.194765492042109 8.194765492042109 4.771212547196626 0 0.7672203223519531 2.0 0.6861818737241735 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}A;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAYY{I|L}A;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DY{I|L}A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KG]DYDYAY{I|L}A;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAY{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}YA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KG]DDYYAY{I|L}A;{[YD]|[{M(Oxidation (M))|F}M]}[KG]DYAY{I|L}A;[KG]DYDAYY{I|L}A 5.1964;4.7912;4.5004;4.2448;4.1738;4.0952;3.9891;3.9144;3.8624;3.7687 -;-;-;-;-;-;-;-;-;- 646 1 1.62 40342.8 1.0 4914 5302 10216 HBL1_DMSO_200M_050219_1,10218 HBL1_DMSO_200M_050219_1,10218,YAYDGKDYLA False True YAYDGKDYLA 53.395472 589.772021472454 35907848.0 10216.0 nc|ENSG00000204632|P17693-4|HLA-G;;nc|ENSG00000204632|P17693-5|HLA-G;;ENSG00000204632|ENST00000360323|HLA-G 4.534184137980144 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10219 53.397 20.0 2694200.0 25 0 406060.0 + 4489 DAYELKHAL 9 85 530.2771426516274 1058.5397323700547 2 530.2772704958916 MULTI CID FTMS 0 0 0 10216 2806995.75 0.7698975235222631 -1 0.134246826171875 3 Unmodified _DAYELKHAL_ ENSG00000164111|ENST00000296511|ANXA5;ENST00000513428.5_1_4:122602814-122617744:-|nuORF 62.57269311338072 0.0246576765497938 3 {[DA]|[EG]}YE{I|L}KHA{I|L} 9 0 + 76.476 0.0 0.0 7.2247 7.2247 94.839 0.0 0.0 0.0 49.72357194224834 9.393105370789598 9.393105370789598 27.0609971201948 0 1.5356668758921828 1.6989700043360187 0.3494850021680094 0.0 + + {[DA]|[EG]}YE{I|L}KHA{I|L};{[DA]|[EG]}{I|L}[YE]KHA{I|L};{[DA]|[EG]}{I|L}[QA]A{[WT]|[RM]}A{I|L};[HA][K{I|L}]EYDA{I|L} 7.2247;4.6682;2.8536;1.5822 +;-;-;- + 140 + 1 1.62 47389.3 1.0 4915 5302 10216 HBL1_DMSO_200M_050219_1,10219 HBL1_DMSO_200M_050219_1,10219,DAYELKHAL True True DAYELKHAL 53.396651 530.277270495892 24424390.0 10216.0 ENST00000513428.5_1_4:122602814-122617744:-|nuORF;;ENSG00000164111|ENST00000296511|ANXA5 8.1800217628479 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10220 53.398 38.0 1237800.0 25 0 94540.0 + + 35835 KVDSNGVITV 10 78 516.2902513462708 1030.5659497593415 2 516.2931396365166 MULTI CID FTMS 0 0 0 10216 923643.9375 1.0 0 0.0 4 Unmodified _SVLDERLTV_ nc|ENSG00000011143|Q9NXB0-2|MKS1;nc|ENSG00000011143|Q9NXB0-3|MKS1;ENSG00000011143|ENST00000393119|MKS1 43.85829265575387 0.0542763391141878 3 KV{I|L}TV 5 -1 50.662 0.0 0.0 4.9159 0.0 0.0 472.1900196759781 0.0 472.1900196759781 0.0 40.7234182151732 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.7614393726401688 KV{I|L}TV 4.9159 - 93 1 1.62 42958.7 1.0 4916 5302 10216 HBL1_DMSO_200M_050219_1,10220 HBL1_DMSO_200M_050219_1,10220,SVLDERLTV False False KVDSNGVITV 53.397829 516.293139636517 7680574.5 10216.0 nc|ENSG00000011143|Q9NXB0-2|MKS1;;nc|ENSG00000011143|Q9NXB0-3|MKS1;;ENSG00000011143|ENST00000393119|MKS1 3.189363400141398 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10221 53.399 57.0 781460.0 25 0 141590.0 + 10019 FPLSCIYFL 9 88 368.194404519104 1101.5613841575118 3 368.1943237185478 MULTI CID FTMS 0 0 0 10216 594036.8125 0.0336408550737572 -9 0.999603271484375 5 Unmodified _FPLSCIYFL_ REV__ENSG00000119714|ENST00000650645|GPR68 8.593279151180031 0.6146971463335029 3 {I|L} 1 -1 13.979 0.0 0.0 1.2691 0.0 0.0 970.4663504434478 0.0 970.4663504434478 0.0 -12.21848749616356 -12.21848749616356 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2691 + + 28 + 1 1.62 42721.0 1.0 4917 5302 10216 HBL1_DMSO_200M_050219_1,10221 HBL1_DMSO_200M_050219_1,10221,FPLSCIYFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10222 53.403 173.0 502650.0 25 0 70552.0 + -1 VTDSTKTC 8 97 456.2105986103064 910.4066442874127 2 456.2107421755791 MULTI CID FTMS 0 0 0 10216 457051.15625 1.0 0 0.0 6 Carbamidomethyl (C) _VTDSTKTC(Carbamidomethyl (C))_ REV__ENSG00000028137|ENST00000376259|TNFRSF1B;REV__ENST00000492361.1_1_1:12227075-12267074:+|nuORF;REV__nc|ENSG00000028137|P20333-2|TNFRSF1B 8.593279151180031 0.7721714526254883 3 VS 2 -1 20.969 0.0 0.0 2.3033 0.0 0.0 0.0 721.2841806879193 721.2841806879193 9.186363512511502 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VS 2.3033 - 92 + 1 1.62 74441.1 1.0 4918 5302 10216 HBL1_DMSO_200M_050219_1,10222 HBL1_DMSO_200M_050219_1,10222,VTDSTKTC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10223 53.405 113.0 684960.0 25 0 63071.0 + 44958 TAAIISRV 8 97 415.9082101762759 1244.7028011290276 3 415.9079772830009 MULTI CID FTMS 0 0 0 10216 413028.96875 0.7611887649138707 -2 0.2223358154296875 7 Unmodified _YPQLKRVWGV_ ENSG00000214517|ENST00000328257|PPME1;nc|ENSG00000214517|Q9Y570-4|PPME1 6.1918466704503565 0.6979955778746556 3 YP{M(Oxidation (M))|F} 3 8 38.293 0.0 0.0 3.0765 0.0 0.0 0.0 834.4985614235904 834.4985614235904 17.18617969400347 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 YP{M(Oxidation (M))|F} 3.0765 - 98 + 1 1.62 69786.3 1.0 4919 5302 10216 HBL1_DMSO_200M_050219_1,10223 HBL1_DMSO_200M_050219_1,10223,YPQLKRVWGV False False TAAIISRV 53.404999 415.907977283001 1200500.25 10216.0 ENSG00000214517|ENST00000328257|PPME1;;nc|ENSG00000214517|Q9Y570-4|PPME1 0.4095278084278106 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10224 53.416 638.0 329820.0 25 0 20457.0 + -1 GLVCLGYCLT 10 176 578.2813924311727 1154.5482319291452 2 578.2814819216728 MULTI CID FTMS 0 0 0 10216 305524.875 0.1544732285057006 -9 0.999603271484375 8 2 Carbamidomethyl (C) _GLVC(Carbamidomethyl (C))LGYC(Carbamidomethyl (C))LT_ REV__ENSG00000100731|ENST00000304743|PCNX1;REV__nc|ENSG00000100731|Q96RV3-3|PCNX1;REV__nc|ENSG00000100731|Q96RV3-4|PCNX1 15.847184025352805 0.5816416552707754 3 {[VA]|[{I|L}G]}{[YC]|[HE]}PPA{I|L}HGQ 11 -1 + 55.436 0.0 0.0 4.8016 4.8016 80.544 0.0 0.0 0.0 21.02176645737459 1.3425404900326043 1.3425404900326043 6.262874945799766 0 0.4247425010840047 2.0 0.0 0.9356403582850464 {[VA]|[{I|L}G]}{[YC]|[HE]}PPA{I|L}HGQ;{[VA]|[{I|L}G]}D[{M(Oxidation (M))|F}T]PA{I|L}HGQ;{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]NASV{[{M(Oxidation (M))|F}C]|[YS]};{[VA]|[{I|L}G]}V{[QS]|[NT]}HP[PA]{[{M(Oxidation (M))|F}C]|[YS]};{[VA]|[{I|L}G]}[PA][YQ]ASV{[{M(Oxidation (M))|F}C]|[YS]};{[VA]|[{I|L}G]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}SASV{[{M(Oxidation (M))|F}C]|[YS]};{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]GGASV{[{M(Oxidation (M))|F}C]|[YS]};{[VA]|[{I|L}G]}EE{[DS]|[MA]|[CV]|TT}A{I|L}HGQ;{[VA]|[{I|L}G]}[C(Carbamidomethyl (C))D][KG]A{I|L}HGQ;{[VA]|[{I|L}G]}EE{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}HGQ 4.8016;4.2591;4.1881;4.0547;2.8137;2.7436;2.4497;2.3705;2.2179;2.2142 -;-;-;-;-;-;-;-;-;- 3251 + 1 1.62 160290.1 1.0 4920 5302 10216 HBL1_DMSO_200M_050219_1,10224 HBL1_DMSO_200M_050219_1,10224,GLVCLGYCLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10225 53.419 144.0 558890.0 25 0 30072.0 + 2485 AQYEHDLEV 9 123 552.2536401695696 1102.4927274059391 2 552.2534057497978 MULTI CID FTMS 0 0 0 10216 292672.21875 0.0240279511538534 -3 0.3243331909179687 9 Unmodified _AQYEHDLEV_ ENSG00000132341|ENST00000543796|RAN;ENST00000413691.2_1_4:174554896-174555010:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 27.628801355627647 0.1796483985696185 3 VEY{M(Oxidation (M))|F}TEV 7 6 32.668 0.0 0.0 2.9631 0.0 0.0 217.1118202787892 0.0 217.1118202787892 0.0 20.44994474394521 0.0 0.0 0 0.8182503180159344 0.0 0.3807196863200844 0.0 VEY{M(Oxidation (M))|F}TEV 2.9631 - 1109 + 1 1.62 68402.7 1.0 4921 5302 10216 HBL1_DMSO_200M_050219_1,10225 HBL1_DMSO_200M_050219_1,10225,AQYEHDLEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10226 53.425 311.0 344600.0 25 0 23030.0 + 30293 QYQDNIKEL 9 127 575.7897065513952 1149.5648601695902 2 575.7891723513603 MULTI CID FTMS 0 0 0 10216 219539.390625 0.3220326967727882 -1 0.134246826171875 10 Unmodified _QYQDNIKEL_ ENSG00000090889|ENST00000374403|KIF4A;nc|ENSG00000090889|O95239-2|KIF4A 57.72198328787511 0.0273433238377839 3 [YQ]QDN{I|L}KE{I|L} 9 0 + 43.876 0.0 0.0 3.8167 3.8167 80.771 0.0 0.0 0.0 15.524228918466283 4.825546980586914 4.825546980586914 9.208187539523747 0 0.5866968715561641 1.5228787452803376 0.7302046884880937 0.5 + + [YQ]QDN{I|L}KE{I|L};[YQ]QDGG{I|L}KE{I|L};[YQ][AG]DN{I|L}KE{I|L};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))NN{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}C(Carbamidomethyl (C)){I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[YQ][AG]DGG{I|L}KE{I|L};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))GGN{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}[CG]NN{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))NGG{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QD]|[EN]|[WG]|[KD]|[RS]}VQC(Carbamidomethyl (C)){I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.8167;3.0157;3.0157;2.986;2.3376;2.2185;2.185;2.185;2.185;1.9221 +;-;-;-;-;-;-;-;-;- + 1277 + 1 1.62 85684.6 1.0 4922 5302 10216 HBL1_DMSO_200M_050219_1,10226 HBL1_DMSO_200M_050219_1,10226,QYQDNIKEL True True QYQDNIKEL 53.424708 575.78917235136 3625748.5 10216.0 nc|ENSG00000090889|O95239-2|KIF4A;;ENSG00000090889|ENST00000374403|KIF4A 6.419616222381592 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10227 53.43 299.0 444280.0 25 0 180190.0 + -1 LPMDYVQRV 9 97 568.791980670555 1135.5694084079098 2 568.7922851443291 MULTI CID FTMS 0 0 0 10216 205566.59375 0.963829847712642 -1 0.134246826171875 11 Oxidation (M) _LPM(Oxidation (M))DYVQRV_ ENSG00000179115|ENST00000314606|FARSA;nc|ENSG00000179115|Q9Y285-2|FARSA 32.78568957990786 0.1150597335874693 3 {I|L}P{M(Oxidation (M))|F}DYVQ[RV] 9 -1 + 74.575 0.0 0.0 6.5672 6.5672 88.442 0.0 0.0 0.0 60.59562510389476 4.762036441594191 4.762036441594191 8.846065812979305 0 0.3494850021680094 1.6989700043360187 0.0 0.4247425010840047 {I|L}P{M(Oxidation (M))|F}DYVQ[RV];{I|L}P{M(Oxidation (M))|F}DYV[RN]{I|L};{I|L}P{M(Oxidation (M))|F}DYV[AG][RV];{I|L}P{M(Oxidation (M))|F}V{[YD]|[{M(Oxidation (M))|F}M]}Q[RV];{I|L}P{M(Oxidation (M))|F}V{[YD]|[{M(Oxidation (M))|F}M]}[RN]{I|L};{I|L}P{M(Oxidation (M))|F}V{[YD]|[{M(Oxidation (M))|F}M]}[AG][RV];{I|L}P{M(Oxidation (M))|F}QQ[QT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{I|L}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}Q[RV] 6.5672;5.7882;5.7563;4.3869;3.6079;3.576;2.6767;1.3496 +;-;-;-;-;-;-;- + 188 + 1 1.62 108678.6 1.0 4923 5302 10216 HBL1_DMSO_200M_050219_1,10227 HBL1_DMSO_200M_050219_1,10227,LPMDYVQRV False False LPMDYVQRV 53.430185 568.792285144329 3757042.75 10216.0 ENSG00000179115|ENST00000314606|FARSA;;nc|ENSG00000179115|Q9Y285-2|FARSA 5.892308712005615 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10228 53.444 794.0 274120.0 25 0 18410.0 34019 SLIVQWPNQ 9 232 542.7931421868918 1083.5717314405836 2 543.2981445193291 MULTI CID FTMS 0 0 0 10216 210222.640625 0.0072357328445207 -9 0.999603271484375 12 Unmodified _SLIVQWPNQ_ ENST00000419303.5_1_22:22348995-22398182:-|nuORF 28.49450938151212 0.1686335738423394 3 {NN|[MP]|[D{I|L}]|[EV]}QAVQG{I|L}P 9 7 38.549 0.0 0.0 3.5576 0.0 0.0 0.0 159.03744713532947 159.03744713532947 -3.517135885695432 0.0 -3.517135885695432 0.0 0 0.5 1.3010299956639813 0.8996498648046138 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}QAVQG{I|L}P 3.5576 - 4288 1 1.62 169459.4 1.0 4924 5302 10216 HBL1_DMSO_200M_050219_1,10228 HBL1_DMSO_200M_050219_1,10228,SLIVQWPNQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10229 53.458 800.0 344870.0 25 0 16666.0 26858 PAYYPNAGL 9 226 483.2387397418232 964.4629265504464 2 483.2386962771416 MULTI CID FTMS 0 0 0 10216 167892.15625 1.0 0 0.0 13 Unmodified _PAYYPNAGL_ ENSG00000198670|ENST00000316300|LPA 24.67388899826682 0.2172451872415813 3 [PA]YVS{[QS]|[NT]}Y 8 5 41.278 0.0 0.0 4.2799 0.0 0.0 0.0 66.03571497134999 66.03571497134999 14.91821465477974 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.0 0.2614393726401688 [PA]YVS{[QS]|[NT]}Y 4.2799 - 1400 + 1 1.62 207270.9 0.8899999856948853 4925 5302 10216 HBL1_DMSO_200M_050219_1,10229 HBL1_DMSO_200M_050219_1,10229,PAYYPNAGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10230 53.472 800.0 185340.0 25 0 47805.0 -1 0 138 599.3398096304968 598.3325331638968 1 599.3398925662041 MULTI CID FTMS 0 0 0 10216 148373.921875 0.2293733279973533 6 -0.7403297424316406 14 3 [QP]{I|L}E{I|L} 5 -1 + 39.139 0.0 0.0 6.5413 6.5413 90.511 0.0 0.0 0.0 8.075800620875768 14.208187539523747 8.075800620875768 10.225441575872722 0 0.1989700043360188 1.3010299956639813 0.0 0.1462566630072955 [QP]{I|L}E{I|L};[{I|L}P]EQ{I|L};[EP]{I|L}Q{I|L};[{I|L}P]QE{I|L};[AG]P{I|L}E{I|L};[{I|L}P]E[AG]{I|L};[Q{I|L}]PE{I|L};[PG]A{I|L}E{I|L};[AG]{I|L}PE{I|L};[EP]{I|L}[AG]{I|L} 6.5413;4.8323;3.8617;3.8281;3.6444;3.2375;2.9542;2.766;2.4762;2.2669 -;-;-;-;-;-;-;-;-;- 294 1 1.62 111563.9 0.9100000262260436 4926 5302 10216 HBL1_DMSO_200M_050219_1,10230 HBL1_DMSO_200M_050219_1,10230, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10231 53.487 800.0 369490.0 25 0 24320.0 + 31597 RQTFVIHKL 9 257 381.2328133427106 1140.676610628332 3 381.2329284548759 MULTI CID FTMS 0 0 0 10216 133031.3125 1.0 0 0.0 15 Unmodified _RQTFVIHKL_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 27.088373467376528 0.1865245257266215 3 YEEV{I|L}HK{I|L} 8 4 30.243 0.0 0.0 2.6513 0.0 0.0 111.14235414132948 0.0 111.14235414132948 0.0 20.94585911835517 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.1643943297944484 YEEV{I|L}HK{I|L} 2.6513 - 347 + 1 1.62 231981.2 0.6200000047683716 4927 5302 10216 HBL1_DMSO_200M_050219_1,10231 HBL1_DMSO_200M_050219_1,10231,RQTFVIHKL False True RQTFVIHKL 53.486845 381.232928454876 1360590.375 10216.0 ENSG00000163535|ENST00000357799|SGO2;;nc|ENSG00000163535|Q562F6-2|SGO2 6.744865417480469 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10232 53.501 800.0 90375.0 25 0 4009.4 -1 0 98 723.3994576720277 722.3921812054276 1 723.4003173708916 MULTI CID FTMS 0 0 0 10216 123271.84375 0.7791817177576619 -2 0.2223358154296875 16 3 [Y{I|L}]NES 5 -1 25.388 0.0 0.0 3.5145 0.0 0.0 0.0 113.10211707872762 113.10211707872762 14.982072536896176 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.3807196863200844 0.3054621874040891 [Y{I|L}]NES 3.5145 - 309 1 1.62 63965.3 0.75 4928 5302 10216 HBL1_DMSO_200M_050219_1,10232 HBL1_DMSO_200M_050219_1,10232, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10233 53.51 440.0 208340.0 25 0 17933.0 + 38152 TPPEPALV 8 146 412.23204552538647 0 412.2318603396416 PEAK CID FTMS 0 0 0 10216 127641.640625 0.3397993415374248 -9 0.999603271484375 17 Unmodified _TPPEPALV_ REV__ENSG00000142733|ENST00000357582|MAP3K6;REV__ENST00000470890.1_1_1:27681884-27683265:-|nuORF;REV__nc|ENSG00000142733|O95382-3|MAP3K6 13.50788311687929 0.5021269579892848 3 E 1 -1 6.9897 0.0 0.0 0.84986 0.0 0.0 230.1642730802667 460.2204989068969 690.3847719871636 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.84986 + + 37 + 1 1.62 73297.1 1.0 4929 5302 10216 HBL1_DMSO_200M_050219_1,10233 HBL1_DMSO_200M_050219_1,10233,TPPEPALV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10234 53.511 58.0 1727600.0 25 0 163290.0 + -1 EAMMKRSI 8 115 499.24479910959593 996.475045285992 2 499.7455932497978 MULTI CID FTMS 0 0 0 10216 109368.4140625 0.4804873657162878 7 -0.7827491760253906 18 2 Oxidation (M) _EAM(Oxidation (M))M(Oxidation (M))KRSI_ REV__ENSG00000163389|ENST00000295588|POGLUT1;REV__ENST00000390401.2_1_3:119187859-119190300:+|nuORF 14.581692164780916 0.6954967302934248 3 M{I|L}TE{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L} 8 -1 + 21.604 0.0 0.0 2.168 2.168 75.309 0.0 0.0 0.0 3.679767852945943 1.1709124234504031 1.1709124234504031 6.989700043360186 0 0.0 0.0 0.0 0.0 M{I|L}TE{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L};M{[YD]|[{M(Oxidation (M))|F}M]}[{M(Oxidation (M))|F}V]P{I|L}{I|L};[TP]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TP[EP];[TP]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PT[EP];[TP]P{[QV]|[N{I|L}]|[RA]|[KV]}ET[EP];[{I|L}V][Y{M(Oxidation (M))|F}]ET[EP] 2.168;1.4666;0.89491;0.49557;0.31885;0.25737 -;-;-;-;-;- 405 + 1 1.62 80164.7 1.0 4930 5302 10216 HBL1_DMSO_200M_050219_1,10234 HBL1_DMSO_200M_050219_1,10234,EAMMKRSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10236 53.516 4.7 12260000.0 25 0 1991100.0 + 24405 MFQNRVRPL 9 73 387.549506438511 1159.626689915733 3 387.5503112673759 MULTI CID FTMS 0 0 0 10235 9040002.0 0.5910284644868138 1 -0.0470771789550781 1 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 16.942295170755138 0.3780752226737986 3 M{M(Oxidation (M))|F} 2 7 20.969 0.0 0.0 1.8083 0.0 0.0 0.0 878.496399617435 878.496399617435 11.588709367037282 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + M{M(Oxidation (M))|F} 1.8083 + + 28 + 1 1.621 49314.1 1.0 4931 5303 10235 HBL1_DMSO_200M_050219_1,10236 HBL1_DMSO_200M_050219_1,10236,MFQNRVRPL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10237 53.517 6.6 9225500.0 25 0 1743000.0 + 37051 TGFSPRQI 8 84 453.2454977186477 904.4764425040954 2 453.2457153201103 MULTI CID FTMS 0 0 0 10235 13121756.0 0.3500070152077968 -3 0.3440628051757812 2 Unmodified _TGFSPRQI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 58.6788170122104 0.1149141431586871 3 TG{M(Oxidation (M))|F}SP 5 3 64.737 0.0 0.0 7.1574 0.0 0.0 0.0 412.2320650690063 412.2320650690063 51.972849678676205 0.0 0.0 0.0 0 1.305462187404089 1.5228787452803376 0.0 0.0 + TG{M(Oxidation (M))|F}SP 7.1574 + + 96 + 1 1.621 51877.0 1.0 4932 5303 10235 HBL1_DMSO_200M_050219_1,10237 HBL1_DMSO_200M_050219_1,10237,TGFSPRQI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10238 53.518 20.0 3417000.0 25 0 302070.0 + 27560 PLAPMEPLL 9 81 498.7775365986361 995.5405202640724 2 498.7773620486259 MULTI CID FTMS 0 0 0 10235 2444175.5 0.5245167694361732 -2 0.2559738159179687 3 Oxidation (M) _PLAPM(Oxidation (M))EPLL_ ENSG00000137877|ENST00000320955|SPTBN5 46.92087301778293 0.0471210510596396 3 [{I|L}P][WE]EP{I|L}{I|L} 8 3 + 62.925 0.0 0.0 6.3207 6.3207 86.795 0.0 0.0 0.0 12.095150145426317 14.63660567114374 12.095150145426317 7.488962955951237 0 1.2302046884880935 2.0 0.4247425010840047 0.0 [{I|L}P][WE]EP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))Q][VG]P{I|L}{I|L};[{I|L}P][HA][MT]T{I|L}{I|L};[TP][RN]GEP{I|L}{I|L};[TP]{[WN]|[YH]}[VG]P{I|L}{I|L};[TP][QP][KC]P{I|L}{I|L};[TA]YYRP{I|L}{I|L};[TA]YY[VG]P{I|L}{I|L} 6.3207;5.5684;5.1904;5.1057;4.7342;4.4318;3.9829;3.0525 -;-;-;-;-;-;-;- 277 1 1.621 56184.3 1.0 4933 5303 10235 HBL1_DMSO_200M_050219_1,10238 HBL1_DMSO_200M_050219_1,10238,PLAPMEPLL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10239 53.519 31.0 2553500.0 25 0 220450.0 + 21255 LPDTMSLTV 9 100 488.7531214727471 975.4916900122944 2 488.7530395388603 MULTI CID FTMS 0 0 0 10235 2258101.75 0.5002179771081947 5 -0.6186027526855469 4 Unmodified _LPDTMSLTV_ REV__ENSG00000134376|ENST00000367400|CRB1;REV__nc|ENSG00000134376|P82279-2|CRB1;REV__nc|ENSG00000134376|P82279-3|CRB1;REV__nc|ENSG00000134376|P82279-4|CRB1 30.22481116460888 0.1466181017706357 3 [EP]YAPST{I|L}V 9 -1 + 28.874 0.0 0.0 2.9599 2.9599 67.527 0.0 0.0 0.0 3.010299956639816 0.4575749056067515 0.4575749056067515 0.4575749056067515 0 0.3182503180159344 0.0 0.3807196863200844 0.0 [EP]YAPST{I|L}V;[EP]YAP{I|L}{[WT]|[RM]};[{I|L}P][EP]YA{[WT]|[RM]};[EP]PYAST{I|L}V;[EP]YPAST{I|L}V;[EP]YPA{I|L}{[WT]|[RM]};[EP]PYA{I|L}{[WT]|[RM]};{[HG]|PP}EYAST{I|L}V;{[HG]|PP}EYA{I|L}{[WT]|[RM]};[EP]YP{I|L}A{[WT]|[RM]} 2.9599;2.913;2.6513;2.4708;2.4708;2.4239;2.4239;2.1622;2.1153;2.1153 -;-;-;-;-;-;-;-;-;- 902 1 1.621 67928.3 1.0 4934 5303 10235 HBL1_DMSO_200M_050219_1,10239 HBL1_DMSO_200M_050219_1,10239,LPDTMSLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10240 53.52 30.0 2284900.0 25 0 196800.0 + 2152 APYPTPAQV 9 89 472.24781435238816 942.4810757715765 2 472.2478210330009 MULTI CID FTMS 0 0 0 10235 2189995.25 0.443630405643153 3 -0.3744583129882812 5 Unmodified _APYPTPAQV_ ENSG00000198807|ENST00000361487|PAX9 63.562846038646086 0.0241094678104353 3 [PA][TP]Y[PA]QV 9 2 + 41.531 0.0 0.0 4.4066 4.4066 72.566 0.0 0.0 0.0 1.2700528115977503 14.09765299137284 1.2700528115977503 1.2700528115977503 0 1.0172203223519531 1.2218487496163564 1.174742501084005 0.0 [PA][TP]Y[PA]QV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TPA[PA]QV;[TP]YPA[PA]QV;[TP][PA]Y[PA]QV;[PA]Y[TP][PA]QV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[TP][PA]QV;{NN|[MP]|[D{I|L}]|[EV]}{[ET]|[MV]}A[PA]QV;[PA]Q{[QS]|[NT]}[VS]QV;[PA]Q[SG]A[VS]QV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TPPAAQV 4.4066;4.2719;3.8982;3.581;3.5553;3.1033;2.9023;2.8408;2.7082;2.6289 -;-;-;-;+;-;-;-;-;- + 705 1 1.621 60185.5 1.0 4935 5303 10235 HBL1_DMSO_200M_050219_1,10240 HBL1_DMSO_200M_050219_1,10240,APYPTPAQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10241 53.521 25.0 2744900.0 25 0 662440.0 + 24409 MFQNRVRPL 9 52 580.8201570176382 1159.6257611020762 2 580.8217651247978 MULTI CID FTMS 0 0 0 10235 2020248.5 0.6554369308366312 1 -0.0470771789550781 6 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 8.593279151180031 0.6146971463335029 3 {I|L}T 2 9 18.583 0.0 0.0 1.6025 0.0 0.0 0.0 942.4838961236936 942.4838961236936 8.1259189508755 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}T 1.6025 - 8 + 1 1.621 58037.7 1.0 4936 5303 10235 HBL1_DMSO_200M_050219_1,10241 HBL1_DMSO_200M_050219_1,10241,MFQNRVRPL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10242 53.523 37.0 2028300.0 25 0 336190.0 + 22016 LPPPPPPAM 9 80 458.7515933437354 915.4886337542708 2 458.7515441775322 MULTI CID FTMS 0 0 0 10235 1879413.5 0.2685373030769761 9 -0.8499755859375 7 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 3 [{I|L}P]PPPP 6 3 55.935 0.0 0.0 6.1098 0.0 0.0 0.0 314.11725390580347 314.11725390580347 33.36188426947686 0.0 0.0 0.0 0 1.6549471895720984 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 6.1098 + + 300 1 1.621 65851.7 1.0 4937 5303 10235 HBL1_DMSO_200M_050219_1,10242 HBL1_DMSO_200M_050219_1,10242,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10243 53.524 44.0 3757000.0 25 0 732040.0 + 15392 IPPDQQRLI 9 100 540.3145428572215 1078.6145327812428 2 540.3143798708916 MULTI CID FTMS 0 0 0 10235 1541309.125 0.0295936700641552 -8 0.8901252746582031 8 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 34.40172386719151 0.1061884637610825 3 {I|L}PPDQQ 6 3 63.99 0.0 0.0 5.9326 0.0 0.0 0.0 397.2581881158813 397.2581881158813 37.4619877965177 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.6861818737241735 + {I|L}PPDQQ 5.9326 + + 162 + 1 1.621 136424.2 1.0 4938 5303 10235 HBL1_DMSO_200M_050219_1,10243 HBL1_DMSO_200M_050219_1,10243,IPPDQQRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10244 53.525 69.0 1714800.0 25 0 202830.0 + 2847 AVARGLPGV 9 108 420.2586187714368 838.5026846096737 2 420.2585021853447 MULTI CID FTMS 0 0 0 10235 1316708.75 0.8519345683401686 -1 0.1217269897460937 9 Unmodified _AVARGLPGV_ ENST00000373087.6_1_1:37940193-37941091:+|nuORF 57.47134341890925 0.0274820932774257 3 {[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}PGV 9 0 + 68.381 0.0 0.0 8.1551 8.1551 92.113 0.0 0.0 0.0 20.737862141609185 56.408599403169326 20.737862141609185 8.520599913279625 0 1.6549471895720984 2.0 0.0 0.25 + + {[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}PGV;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}AVPGV;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}GP{I|L}GV;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}VAPGV;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}APVGV;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}APRV;{[VA]|[{I|L}G]}T[KP]APR;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}V[QP]V;[KP][QT]{I|L}PR;[PG]V[PS]KRV 8.1551;7.139;7.0842;7.0234;6.3327;5.7648;5.6256;4.341;3.0708;2.6099 +;-;-;-;-;-;-;-;-;- + 425 1 1.621 96735.8 1.0 4939 5303 10235 HBL1_DMSO_200M_050219_1,10244 HBL1_DMSO_200M_050219_1,10244,AVARGLPGV True True AVARGLPGV 53.525438 420.258502185345 11609359.0 10235.0 ENST00000373087.6_1_1:37940193-37941091:+|nuORF 6.795380274454753 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10245 53.527 63.0 988710.0 25 0 65812.0 + 6449 EAFEHPNVV 9 105 521.2534436715681 1040.492334409936 2 521.2538940310478 MULTI CID FTMS 0 0 0 10235 1060481.0 0.4399247240257753 1 -0.0470771789550781 10 Unmodified _EAFEHPNVV_ ENSG00000135446|ENST00000257904|CDK4;ENST00000551706.1_1_12:58145281-58145962:-|nuORF 81.89019881105858 0.0170587746866453 3 EA[YR]G[{M(Oxidation (M))|F}T]VV 9 5 + 44.354 0.0 0.0 4.2628 4.2628 83.95 0.0 0.0 0.0 11.836290413155233 8.539011937279412 8.539011937279412 13.597203003712035 0 1.086696871556164 2.0 0.0 0.2887254899964357 EA[YR]G[{M(Oxidation (M))|F}T]VV;[PG]GVC{[CP]|[EA]}[NP]VV;[NP]VC{[CP]|[EA]}[NP]VV;[{M(Oxidation (M))|F}E]H{[CP]|[EA]}[NP]VV;[PG]GVC[PG]G{[CP]|[EA]}VV;{[YC]|[HE]}{M(Oxidation (M))|F}{[CP]|[EA]}[NP]VV;[PG]GHE{M(Oxidation (M))|F}{[CP]|[EA]}VV;[NP]VC[PG]G{[CP]|[EA]}VV;[NP]HE{M(Oxidation (M))|F}{[CP]|[EA]}VV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NE{M(Oxidation (M))|F}{[CP]|[EA]}VV 4.2628;2.956;2.9027;2.5202;2.4134;2.3798;2.3694;2.3566;2.3203;2.2002 -;-;-;-;-;-;-;-;-;- 2049 + 1 1.621 58223.8 1.0 4940 5303 10235 HBL1_DMSO_200M_050219_1,10245 HBL1_DMSO_200M_050219_1,10245,EAFEHPNVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10246 53.529 70.0 953520.0 25 0 132630.0 + 10790 FYQEHPDL 8 87 524.740519410088 1047.466485886976 2 524.7402831912041 MULTI CID FTMS 0 0 0 10235 657534.375 0.7597986696563037 -1 0.1217269897460937 11 Unmodified _FYQEHPDL_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000585223.1_1_17:62500698-62502378:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5 42.09456458481378 0.1992492688217789 3 {[QN]|[E{I|L}]|[KN]}THEQYE 8 7 + 54.078 0.0 0.0 5.1627 5.1627 76.704 0.0 0.0 0.0 1.989700043360188 33.60181768564202 1.989700043360188 2.3044892137827446 0 0.2887254899964357 0.0 0.8807196863200843 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}THEQYE;{M(Oxidation (M))|F}YQEH[DP]{I|L};{[YC]|[HE]}Q[KS]QYE;[YK]C[KS]QYE;{[QN]|[E{I|L}]|[KN]}THE[AG]YE;{[QN]|[E{I|L}]|[KN]}GY{M(Oxidation (M))|F}QYE;{[YC]|[HE]}[VP]{M(Oxidation (M))|F}QYE;{M(Oxidation (M))|F}YQE[W{I|L}]Y;{[YC]|[HE]}Q[KS][AG]YE;[DP][H{I|L}]{M(Oxidation (M))|F}QYE 5.1627;4.9427;4.8952;4.5008;4.2785;4.2299;4.1981;4.1171;4.0109;3.9693 -;+;-;-;-;-;-;-;-;- + 397 1 1.621 56259.0 1.0 4941 5303 10235 HBL1_DMSO_200M_050219_1,10246 HBL1_DMSO_200M_050219_1,10246,FYQEHPDL False True FYQEHPDL 53.528647 524.740283191204 6648311.5 10235.0 ENST00000585223.1_1_17:62500698-62502378:-|nuORF;;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5 7.093542416890462 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10247 53.53 69.0 993150.0 25 0 83568.0 + 44494 YPASIVHQV 9 97 507.2742830540504 1012.5340131749008 2 507.2755615115166 MULTI CID FTMS 0 0 0 10235 662211.0625 0.450953420786668 -3 0.3440628051757812 12 Unmodified _YPASIVHQV_ ENSG00000064393|ENST00000406875|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2 81.89019881105858 0.0170587746866453 3 YPAS{I|L}VHN{I|L} 9 2 + 85.613 0.0 0.0 8.4553 8.4553 84.36 0.0 0.0 0.0 36.47817481888637 1.5490195998574308 1.5490195998574308 1.5490195998574308 0 1.2544321917401078 2.0 0.0 1.5356668758921828 YPAS{I|L}VHN{I|L};YPAS{I|L}VHQV;YPAS{I|L}VHGG{I|L};YPAS{I|L}VH[AG]V;Y[{I|L}T][PG]VHN{I|L};Y[{I|L}T][PG]VHQV;Y[{I|L}T]AGVYN{I|L};Y[{I|L}T]AGVYQV;Y[{I|L}T]QVYN{I|L};Y[{I|L}T]ARYN{I|L} 8.4553;8.3024;6.0293;5.8763;3.2798;3.1268;2.9995;2.8465;2.657;2.657 -;+;-;-;-;-;-;-;-;- + 442 + 1 1.621 60958.9 1.0 4942 5303 10235 HBL1_DMSO_200M_050219_1,10247 HBL1_DMSO_200M_050219_1,10247,YPASIVHQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10248 53.534 216.0 780230.0 25 0 118110.0 + 32221 RVYEEFTKV 9 108 585.811743785244 1169.6089346372878 2 585.8115722537041 MULTI CID FTMS 0 0 0 10235 466837.625 0.6658394857845705 -1 0.1217269897460937 13 Unmodified _RVYEEFTKV_ ENSG00000149262|ENST00000534064|INTS4;nc|ENSG00000149262|Q96HW7-2|INTS4 59.36838082759317 0.0264317782606298 3 EE{M(Oxidation (M))|F}TKV 6 3 55.355 0.0 0.0 4.7327 0.0 0.0 418.234178611525 0.0 418.234178611525 0.0 39.84804636597957 0.0 0.0 0 1.424742501084005 0.0 0.7742275032520141 0.0 + EE{M(Oxidation (M))|F}TKV 4.7327 + + 468 1 1.621 131118.2 1.0 4943 5303 10235 HBL1_DMSO_200M_050219_1,10248 HBL1_DMSO_200M_050219_1,10248,RVYEEFTKV True True RVYEEFTKV 53.534384 585.811572253704 4036784.25 10235.0 nc|ENSG00000149262|Q96HW7-2|INTS4;;ENSG00000149262|ENST00000534064|INTS4 6.76999568939209 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10249 53.536 89.0 648820.0 25 0 47891.0 + 35094 SQVPEVTTV 9 102 480.25622629114736 958.4978996490948 2 480.2569763064384 MULTI CID FTMS 0 0 0 10235 457002.09375 0.5475463006609989 -2 0.2559738159179687 14 Unmodified _SQVPEVTTV_ ENSG00000196455|ENST00000356763|PIK3R4 27.628801355627647 0.1796483985696185 3 [{I|L}P]DTNV 6 6 28.207 0.0 0.0 2.9428 0.0 0.0 0.0 316.1560166747385 316.1560166747385 7.439324796517706 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.9247425010840048 0.0 [{I|L}P]DTNV 2.9428 - 298 1 1.621 48562.2 1.0 4944 5303 10235 HBL1_DMSO_200M_050219_1,10249 HBL1_DMSO_200M_050219_1,10249,SQVPEVTTV False True SQVPEVTTV 53.536342 480.256976306438 8189550.0 10235.0 ENSG00000196455|ENST00000356763|PIK3R4 3.946861664454142 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10250 53.542 297.0 504220.0 25 0 44306.0 + 41777 VPVGKVLKV 9 129 469.82356417513176 937.6325754170635 2 469.8234435915947 MULTI CID FTMS 0 0 0 10235 424199.96875 0.0653998240972777 2 -0.2518119812011719 15 Unmodified _VPVGKVLKV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 58.6788170122104 0.0268135626297836 3 VPV[KG]V{I|L}KV 9 0 + 63.686 0.0 0.0 6.7922 6.7922 91.615 0.0 0.0 0.0 43.83757890502159 12.174661972046046 12.174661972046046 11.294730452096305 0 1.7856668758921828 2.0 0.0 0.0 + + VPV[KG]V{I|L}KV;[VP]V[KG]{I|L}KVV;[VP][KG]V{I|L}KVV;[VP]V[KG]{I|L}VKV;[VP][KG]V{I|L}VKV;VVP[KG]V{I|L}KV;{[QV]|[N{I|L}]|[RA]|[KV]}GPV{I|L}KVV;{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}KVPVV;[KG]VPV{I|L}KVV;{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}VPKVV 6.7922;5.5876;5.4243;5.2107;5.0474;4.394;3.2775;3.2409;3.1525;3.1376 +;-;-;-;-;-;-;-;-;- + 1237 + 1 1.621 116735.6 1.0 4945 5303 10235 HBL1_DMSO_200M_050219_1,10250 HBL1_DMSO_200M_050219_1,10250,VPVGKVLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10251 53.546 230.0 487380.0 25 0 75956.0 -1 0 91 406.789522241463 811.564491549726 2 406.7892639040947 MULTI CID FTMS 0 0 0 10235 394046.46875 0.5942170106605267 -1 0.1217269897460937 16 3 {I|L}G{I|L}K[R{I|L}]{I|L} 7 -1 + 37.223 0.0 0.0 4.5866 4.5866 80.853 0.0 0.0 0.0 25.96405978141579 1.0374943753836163 1.0374943753836163 7.257724967479859 0 0.4247425010840047 0.0 0.0 0.0 {I|L}G{I|L}K[R{I|L}]{I|L};{I|L}{I|L}GK[R{I|L}]{I|L};{I|L}G{I|L}{I|L}[RK]{I|L};{I|L}{I|L}G{I|L}[RK]{I|L} 4.5866;3.6923;3.3544;2.4601 -;-;-;- 50 + 1 1.621 93850.1 1.0 4946 5303 10235 HBL1_DMSO_200M_050219_1,10251 HBL1_DMSO_200M_050219_1,10251, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10252 53.548 113.0 447820.0 25 0 52955.0 + 33592 SIPEINHRL 9 85 360.2043467346285 1077.5912108040854 3 360.2042724490166 MULTI CID FTMS 0 0 0 10235 367628.71875 0.4407867251548714 1 -0.0470771789550781 17 Unmodified _SIPEINHRL_ ENSG00000171310|ENST00000303694|CHST11;nc|ENSG00000171310|Q9NPF2-2|CHST11 15.738622578938676 0.4106572216562794 3 {[TV]|[{I|L}S]}PE{I|L}NHR{I|L} 9 0 + 59.359 0.0 0.0 5.5084 5.5084 86.151 0.0 0.0 0.0 49.75440627993265 2.887955392469692 2.887955392469692 9.208187539523747 0 0.3252574989159953 2.0 0.0 0.3252574989159953 + + {[TV]|[{I|L}S]}PE{I|L}NHR{I|L};{[TV]|[{I|L}S]}PE{I|L}GGHR{I|L};{[TV]|[{I|L}S]}PE{I|L}R[HN]{I|L};{[TV]|[{I|L}S]}PE{I|L}[VG][HN]{I|L};{[TV]|[{I|L}S]}PE[YK][KT]{I|L} 5.5084;4.6539;4.533;3.6785;2.2117 +;-;-;-;- + 96 + 1 1.621 47294.0 1.0 4947 5303 10235 HBL1_DMSO_200M_050219_1,10252 HBL1_DMSO_200M_050219_1,10252,SIPEINHRL False True SIPEINHRL 53.548442 360.204272449017 6063744.0 10235.0 nc|ENSG00000171310|Q9NPF2-2|CHST11;;ENSG00000171310|ENST00000303694|CHST11 3.4229626655578613 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10253 53.552 163.0 418300.0 25 0 34804.0 + 7046 EELEWTERL 9 90 402.1983632428115 1203.573260328635 3 402.1985961794853 MULTI CID FTMS 0 0 0 10235 306058.5625 1.0 0 0.0 18 Unmodified _EELEWTERL_ REV__ENSG00000001497|ENST00000374811|LAS1L;REV__nc|ENSG00000001497|Q9Y4W2-2|LAS1L;REV__nc|ENSG00000001497|Q9Y4W2-3|LAS1L;REV__nc|ENSG00000001497|Q9Y4W2-4|LAS1L 6.723162845929126 0.6799819581413107 3 P{I|L}VE{I|L}R 6 -1 28.946 0.0 0.0 2.405 0.0 0.0 478.1300363069534 0.0 478.1300363069534 0.0 26.72731096978271 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.2742275032520141 P{I|L}VE{I|L}R 2.405 - 59 + 1 1.621 56974.4 1.0 4948 5303 10235 HBL1_DMSO_200M_050219_1,10253 HBL1_DMSO_200M_050219_1,10253,EELEWTERL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10254 53.554 127.0 868110.0 25 0 58766.0 + 2387 AQNTIVPKV 9 128 485.29015742980096 968.565761926402 2 485.2907592654228 MULTI CID FTMS 0 0 0 10235 258298.359375 0.4681707195916213 -2 0.2559738159179687 19 Unmodified _AQNTIVPKV_ ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000529672.1_1_11:111613245-111618714:-|nuORF;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 26.268140514670165 0.1969607489560049 3 [QA]NT{I|L}VVPK 9 2 + 36.432 0.0 0.0 3.7614 3.7614 69.638 0.0 0.0 0.0 17.275492428781924 0.2545373444029053 0.2545373444029053 0.6140877284528159 0 1.7134679910804405 0.6777807052660807 0.0 0.0 [QA]NT{I|L}VVPK;[QA]NT{I|L}VPKV;{[SA]|[TG]}G{I|L}VG[Q{I|L}]PK;[QA]GGT{I|L}VVPK;{[VA]|[{I|L}G]}{[SA]|[TG]}VG[Q{I|L}]PK;[QA]GGT{I|L}VPKV;{[QS]|[NT]}{I|L}VG[Q{I|L}]PK;[AG]S{I|L}VG[Q{I|L}]PK;{[CP]|[EA]}KVG[Q{I|L}]PK;[VG][TA]VG[Q{I|L}]PK 3.7614;3.698;3.1443;2.8107;2.7762;2.7473;2.6945;2.5715;2.3659;2.2962 -;+;-;-;-;-;-;-;-;- + 719 + 1 1.621 86679.1 1.0 4949 5303 10235 HBL1_DMSO_200M_050219_1,10254 HBL1_DMSO_200M_050219_1,10254,AQNTIVPKV False True AQNTIVPKV 53.554236 485.290759265423 13419980.0 10235.0 ENSG00000137713|ENST00000527614|PPP2R1B;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;ENST00000529672.1_1_11:111613245-111618714:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 5.741546471913655 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10255 53.558 208.0 407700.0 25 0 36103.0 + -1 ANQMHPAL 8 126 449.2164555983016 896.4183582634031 2 449.2162658572197 MULTI CID FTMS 0 0 0 10235 248852.78125 1.0 0 0.0 20 Oxidation (M) _ANQM(Oxidation (M))HPAL_ REV__ENSG00000182541|ENST00000331728|LIMK2;REV__nc|ENSG00000182541|P53671-2|LIMK2;REV__nc|ENSG00000182541|P53671-3|LIMK2 10.183394434864962 0.7604730176254005 3 {I|L} 1 -1 13.979 0.0 0.0 1.5595 0.0 0.0 765.3232635141828 0.0 765.3232635141828 0.0 -1.4950692809903643 -1.4950692809903643 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5595 + + 202 + 1 1.621 67370.4 1.0 4950 5303 10235 HBL1_DMSO_200M_050219_1,10255 HBL1_DMSO_200M_050219_1,10255,ANQMHPAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10257 53.563 32.0 1709400.0 25 0 369780.0 + 13437 HLPSDFTPA 9 85 492.74319510731857 983.4718372814372 2 492.7429992556572 MULTI CID FTMS 0 0 0 10256 2423808.5 0.970449597095468 -2 0.1688041687011718 1 Unmodified _HLPSDFTPA_ CON__P01966 21.74664581756881 0.2544899275067181 3 WT{M(Oxidation (M))|F} 3 8 25.177 0.0 0.0 2.56 0.0 0.0 0.0 546.2318819635374 546.2318819635374 7.966430335102288 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 WT{M(Oxidation (M))|F} 2.56 - 106 + 1 1.621 46516.2 1.0 4951 5304 10256 HBL1_DMSO_200M_050219_1,10257 HBL1_DMSO_200M_050219_1,10257,HLPSDFTPA False True HLPSDFTPA 53.562584 492.742999255657 95872256.0 10256.0 P01966 2.782004455725352 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 10258 53.566 199.0 599220.0 25 0 88590.0 22172 LPPWALAAL 9 99 476.28487125370367 950.5551895742074 2 476.2846862673759 MULTI CID FTMS 0 0 0 10256 514976.96875 0.8714867149446771 -7 0.6936912536621094 2 Unmodified _LPPWALAAL_ ENST00000405510.5_2_22:39131173-39131284:-|nuORF 20.871210003555333 0.2717241269066626 3 {I|L}PPEV 5 6 52.295 0.0 0.0 5.5015 0.0 0.0 0.0 412.2285860651001 412.2285860651001 42.0172823798338 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPEV 5.5015 - 69 + 1 1.621 95411.9 1.0 4952 5304 10256 HBL1_DMSO_200M_050219_1,10258 HBL1_DMSO_200M_050219_1,10258,LPPWALAAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10259 53.568 65.0 866080.0 25 0 78090.0 + 2166 AQAEVYKEL 9 81 525.7772468787024 1049.539940824205 2 525.7773315310478 MULTI CID FTMS 0 0 0 10256 1131587.5 0.2389006605836684 -1 0.0470771789550781 3 Unmodified _AQAEVYKEL_ ENSG00000169710|ENST00000306749|FASN 21.59015148037692 0.2564810811560323 3 [QA]AEVY 6 3 49.75 0.0 0.0 4.7402 0.0 0.0 0.0 385.2097958511095 385.2097958511095 23.10667306169737 0.0 0.0 0.0 0 1.174742501084005 0.958607314841775 0.0 0.0 + [QA]AEVY 4.7402 + + 229 + 1 1.621 48443.4 1.0 4953 5304 10256 HBL1_DMSO_200M_050219_1,10259 HBL1_DMSO_200M_050219_1,10259,AQAEVYKEL False True AQAEVYKEL 53.567973 525.777331531048 65960272.0 10256.0 ENSG00000169710|ENST00000306749|FASN 6.704568068186442 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10260 53.573 286.0 302220.0 25 0 22577.0 28006 PMPPLESYSP 10 112 559.2645211223607 1116.5144893115214 2 559.2649413943291 MULTI CID FTMS 0 0 0 10256 330502.3125 1.0 0 0.0 4 Unmodified _PMPPLESYSP_ ENST00000350148.9_1_13:37453875-37494358:-|nuORF;ENST00000483941.1_1_13:37453875-37494793:-|nuORF 14.838274106304384 0.5985701837916485 3 MPH 3 8 39.297 0.0 0.0 3.5196 0.0 0.0 0.0 748.3370455377561 748.3370455377561 20.078474942632592 0.0 0.0 0.0 0 0.6109243748081782 1.0 0.0 0.0 MPH 3.5196 - 534 + 1 1.621 70569.5 1.0 4954 5304 10256 HBL1_DMSO_200M_050219_1,10260 HBL1_DMSO_200M_050219_1,10260,PMPPLESYSP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10261 53.585 684.0 220650.0 25 0 30922.0 -1 DIQQVRDMIIT 11 124 674.3480614126701 1346.68156989214 2 674.3481323122978 MULTI CID FTMS 0 0 0 10256 330484.9375 1.0 0 0.0 5 Oxidation (M) _DIQQVRDM(Oxidation (M))IIT_ ENSG00000177182|ENST00000325897|CLVS1;nc|ENSG00000177182|Q8IUQ0-2|CLVS1 18.373094154950223 0.6529654022026722 3 {NN|[MP]|[D{I|L}]|[EV]}HTVVTVV 9 -1 43.448 0.0 0.0 3.2263 0.0 0.0 0.0 380.12064171251774 380.12064171251774 20.32181524118497 0.0 0.0 0.0 0 0.0 1.154901959985743 1.2134679910804405 0.0 {NN|[MP]|[D{I|L}]|[EV]}HTVVTVV 3.2263 - 1827 1 1.621 110394.8 1.0 4955 5304 10256 HBL1_DMSO_200M_050219_1,10261 HBL1_DMSO_200M_050219_1,10261,DIQQVRDMIIT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10262 53.589 184.0 651720.0 25 0 82513.0 + 18028 KSLGSLPKV 9 104 464.7950423911743 927.5755318491484 2 464.7950927615166 MULTI CID FTMS 0 0 0 10256 302015.09375 1.0 0 0.0 6 Unmodified _KSLGSLPKV_ ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA 17.11289562659939 0.3734572693229295 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 3 7 21.427 0.0 0.0 2.31 0.0 0.0 0.0 577.3683229470579 577.3683229470579 6.377268672201451 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 2.31 - 134 1 1.621 98932.4 1.0 4956 5304 10256 HBL1_DMSO_200M_050219_1,10262 HBL1_DMSO_200M_050219_1,10262,KSLGSLPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10263 53.603 800.0 557090.0 25 0 45788.0 + 32397 RYVDRVTEF 9 286 395.5401960743757 1183.5987588233272 3 395.5399963259697 MULTI CID FTMS 0 0 0 10256 276853.875 1.0 0 0.0 7 Unmodified _RYVDRVTEF_ ENSG00000108465|ENST00000338399|CDK5RAP3;ENST00000582482.1_1_17:46058511-46058865:+|nuORF;nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;nc|ENSG00000108465|Q96JB5-3|CDK5RAP3;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 49.52724829834842 0.0414064571532091 3 [YR]VDRVTE{M(Oxidation (M))|F} 9 0 + 61.753 0.0 0.0 5.2174 5.2174 87.467 0.0 0.0 0.0 15.942346538160066 11.505149978319906 11.505149978319906 15.942346538160066 0 0.6677353201839438 1.154901959985743 1.174742501084005 1.0387254899964358 + + [YR]VDRVTE{M(Oxidation (M))|F};[YV]RDRVTE{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]RRTVTE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{I|L}]RVTE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{I|L}]KVEE{M(Oxidation (M))|F};[YR]VDKVG[NS]{M(Oxidation (M))|F};[YR]VD[VG]K[NS]{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[YQ]RVTE{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][{I|L}P]W[KA]{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{I|L}]RK[NS]{M(Oxidation (M))|F} 5.2174;3.8705;3.6053;3.5927;3.4262;3.3522;3.3134;2.81;2.4986;2.4667 +;-;-;-;-;-;-;-;-;- + 2779 1 1.621 342401.1 0.9300000071525574 4957 5304 10256 HBL1_DMSO_200M_050219_1,10263 HBL1_DMSO_200M_050219_1,10263,RYVDRVTEF True True RYVDRVTEF 53.602502 395.53999632597 3456473.75 10256.0 ENST00000582482.1_1_17:46058511-46058865:+|nuORF;;nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3;;ENSG00000108465|ENST00000338399|CDK5RAP3;;nc|ENSG00000108465|Q96JB5-3|CDK5RAP3 7.91235876083374 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10264 53.609 356.0 321050.0 25 0 54270.0 -1 FSFGIVLCEI 10 109 592.8072806975629 1183.6000084619257 2 592.8081542849541 MULTI CID FTMS 0 0 0 10256 219315.140625 1.0 0 0.0 8 Carbamidomethyl (C) _FSFGIVLC(Carbamidomethyl (C))EI_ ENSG00000106683|ENST00000336180|LIMK1;ENSG00000182541|ENST00000331728|LIMK2;ENST00000482270.5_1_22:31668491-31671520:+|nuORF;nc|ENSG00000106683|P53667-2|LIMK1;nc|ENSG00000106683|P53667-4|LIMK1;nc|ENSG00000182541|P53671-2|LIMK2;nc|ENSG00000182541|P53671-3|LIMK2 13.90604991867851 0.6142120002215601 3 VG[HS]{I|L} 5 -1 18.188 0.0 0.0 1.5366 0.0 0.0 672.3345204084 0.0 672.3345204084 0.0 0.0147128475507685 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 VG[HS]{I|L} 1.5366 - 37 1 1.621 91816.0 1.0 4958 5304 10256 HBL1_DMSO_200M_050219_1,10264 HBL1_DMSO_200M_050219_1,10264,FSFGIVLCEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10265 53.62 608.0 391490.0 25 0 31870.0 + 1350 AKTMRRNTI 9 249 364.2108946039938 1089.6108544121814 3 364.5447265505791 MULTI CID FTMS 0 0 0 10256 187833.03125 1.0 0 0.0 9 Unmodified _AKTMRRNTI_ ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF 10.823927491677226 0.5436922275383211 3 TK{I|L}N 4 7 20.974 0.0 0.0 1.9249 0.0 0.0 148.10150442772562 482.21678721180245 630.3182916395281 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 TK{I|L}N 1.9249 - 871 + 1 1.621 188299.2 1.0 4959 5304 10256 HBL1_DMSO_200M_050219_1,10265 HBL1_DMSO_200M_050219_1,10265,AKTMRRNTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10266 53.633 800.0 389040.0 25 0 44952.0 + 360 AECYMNHRFY 10 155 667.2755580128055 1332.536563092411 2 667.2748290896416 MULTI CID FTMS 0 0 0 10256 170584.015625 0.2657297733734574 -1 0.0470771789550781 10 Unmodified _AECYMNHRFY_ REV__ENSG00000148985|ENST00000278243|PGAP2;REV__ENST00000490830.5_1_11:3845682-3846685:+|nuORF;REV__nc|ENSG00000148985|Q9UHJ9-3|PGAP2;REV__nc|ENSG00000148985|Q9UHJ9-5|PGAP2;REV__nc|ENSG00000148985|Q9UHJ9|PGAP2 19.256988751693697 0.5244284437930726 3 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 96.781 0.0 0.0 7.2629 0.0 0.0 248.09150893379064 0.0 248.09150893379064 0.0 52.70695763266252 0.0 0.0 0 0.7742275032520141 0.0 1.7658715643802765 1.579689690656103 DEAQQNA{M(Oxidation (M))|F}Y 7.2629 - 13493 1 1.621 222642.9 0.8399999737739563 4960 5304 10256 HBL1_DMSO_200M_050219_1,10266 HBL1_DMSO_200M_050219_1,10266,AECYMNHRFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10267 53.649 800.0 288400.0 25 0 19261.0 + 39183 TYQDVGSL 8 115 882.4170135627306 881.4097370961306 1 882.4189330935478 MULTI CID FTMS 0 0 0 10256 167754.9375 0.7999873031087712 -1 0.0470771789550781 11 Unmodified _TYQDVGSL_ ENSG00000105369|ENST00000221972|CD79A;nc|ENSG00000105369|P11912-2|CD79A 89.40071534611396 0.0508339161556384 3 [YT]QDVGS{I|L} 8 0 + 85.445 0.0 0.0 9.6941 9.6941 95.498 0.0 0.0 0.0 14.64886798302652 51.2357747558236 14.64886798302652 9.262137858390815 0 1.7053133008677603 1.3979400086720375 1.581883171732979 0.0 + + [YT]QDVGS{I|L};[YT][AG]DVGS{I|L};[YT]QDRS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}YTVGS{I|L};[YT][AG]DRS{I|L};[YQ]TDVGS{I|L};[YT]QDKD{I|L};[AG]DYTVGS{I|L};[SG]{M(Oxidation (M))|F}TDVGS{I|L};[AG]YTDVGS{I|L} 9.6941;8.6433;8.5844;7.6834;7.5258;7.3551;7.2462;6.9221;6.9086;6.8657 +;-;-;-;-;-;-;-;-;- + 4582 1 1.621 151703.2 0.8299999833106995 4961 5304 10256 HBL1_DMSO_200M_050219_1,10267 HBL1_DMSO_200M_050219_1,10267,TYQDVGSL True True TYQDVGSL 53.648679 882.418933093548 1047010.5 10256.0 nc|ENSG00000105369|P11912-2|CD79A;;ENSG00000105369|ENST00000221972|CD79A;;CD79A|p.M198_S203del|1|0.14|ENSG00000105369|chr19:41880887-41880904|CTCCATGTATGAGGACAT/-|inframe_deletion 7.1543815930684405 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10268 53.663 800.0 110810.0 25 0 8307.9 -1 0 98 954.4309609933368 1906.847369053473 2 954.4335815310478 MULTI CID FTMS 0 0 0 10256 154546.796875 0.965951439699052 1 -0.2047348022460937 12 3 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 83.86 0.0 0.0 4.3978 4.3978 76.308 0.0 0.0 0.0 3.1437180047066 59.9586691089705 3.1437180047066 3.521825181113627 0 0.9247425010840048 0.0 1.2302046884880935 0.6549471895720985 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]QN{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM]{[QD]|[EN]|[WG]|[KD]|[RS]}EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP][AG]N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]QN{M(Oxidation (M))|F}[HV]QEEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]QN{M(Oxidation (M))|F}[HV]QEEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.3978;4.2131;3.9251;3.9251;3.9251;3.9251;3.8346;3.7404;3.7404;3.7404 -;-;-;-;-;-;-;-;-;- 1223 1 1.621 66002.2 0.7699999809265137 4962 5304 10256 HBL1_DMSO_200M_050219_1,10268 HBL1_DMSO_200M_050219_1,10268, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10269 53.673 514.0 232410.0 25 0 16448.0 40080 VGHNLPTI 8 173 425.74245746464 849.4703619960801 2 425.7423889040947 MULTI CID FTMS 0 0 0 10256 162052.296875 0.8845062477943518 1 -0.2047348022460937 13 Unmodified _VGHNLPTI_ ENSG00000092148|ENST00000399332|HECTD1 19.438996006549623 0.6237395211498085 3 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}VKT{I|L} 7 5 + 34.218 0.0 0.0 4.0281 4.0281 81.987 0.0 0.0 0.0 5.272657074340902 9.5597718523608 5.272657074340902 9.304009240123891 0 0.5 0.0 0.3054621874040891 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}VKT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}VTK{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}VT{I|L}K;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y[{I|L}P]T{I|L};[R{M(Oxidation (M))|F}]{[DA]|[EG]}KT{I|L};[R{M(Oxidation (M))|F}]{I|L}[NS]T{I|L};[PA][HQ]{I|L}AT{I|L};[R{M(Oxidation (M))|F}]{[DA]|[EG]}TK{I|L};[R{M(Oxidation (M))|F}]{[DA]|[EG]}T{I|L}K;[HA][QP]{I|L}AT{I|L} 4.0281;2.9329;2.9028;2.6228;2.5296;1.8208;1.5745;1.4343;1.4042;1.3773 -;-;-;-;-;-;-;-;-;- 183 + 1 1.621 100593.1 1.0 4963 5304 10256 HBL1_DMSO_200M_050219_1,10269 HBL1_DMSO_200M_050219_1,10269,VGHNLPTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10270 53.678 264.0 694360.0 25 0 60888.0 44070 YISKFCKL 8 165 501.2769526160761 1000.5393522989522 2 501.2742492556572 MULTI CID FTMS 0 0 0 10256 153844.03125 0.4824507512566677 -1 0.0470771789550781 14 Unmodified _YISKFCKL_ ENST00000359591.8_1_14:23347257-23347470:+|nuORF 23.1484247019978 0.5573009939494978 3 Y{I|L}{I|L}{[QG]|[NA]}HVTA 9 7 + 54.57 0.0 0.0 5.4541 5.4541 76.109 0.0 0.0 0.0 33.28417138506086 1.2846615871543676 1.2846615871543676 1.2846615871543676 0 0.6861818737241735 2.0 0.841129063296272 0.0 Y{I|L}{I|L}{[QG]|[NA]}HVTA;Y{I|L}{I|L}{[QG]|[NA]}HAS{I|L};Y{I|L}{I|L}{[QG]|[NA]}HATV;YP[WK]HVTA;YP[WK]HAS{I|L};YP[WK]HATV;[{I|L}T]{[WT]|[RM]}[KT][HD];[{I|L}T]G[R{I|L}]Q[WQ];[C(Carbamidomethyl (C))K]{I|L}V[NP]VTA;{[{M(Oxidation (M))|F}D]|MM}RRHVTA 5.4541;5.3257;5.0248;1.601;1.4726;1.1717;0.74327;0.56078;0.23182;0.20381 -;-;-;-;-;-;-;-;-;- 1166 + 1 1.621 139664.8 1.0 4964 5304 10256 HBL1_DMSO_200M_050219_1,10270 HBL1_DMSO_200M_050219_1,10270,YISKFCKL False True YLIGQHVTA 53.677644 501.274249255657 1241183.875 10256.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 4.974872589111328 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10271 53.691 800.0 1141500.0 25 0 721260.0 + 30922 RKDLICEF 8 161 512.268184858621 1022.521816784042 2 512.7697021365166 MULTI CID FTMS 0 0 0 10256 130574.46875 0.2846859342814591 10 -0.9477615356445312 15 Unmodified _RKDLICEF_ REV__ENSG00000138399|ENST00000453153|FASTKD1;REV__nc|ENSG00000138399|Q53R41-2|FASTKD1 18.13498045792455 0.6430038125133779 3 MPP{[DS]|[MA]|[CV]|TT}{I|L}ER 8 -1 52.609 0.0 0.0 5.145 0.0 0.0 0.0 94.03042780093983 94.03042780093983 35.37167390053439 0.0 0.0 0.0 0 0.2302046884880938 1.5228787452803376 0.7134679910804405 0.75 MPP{[DS]|[MA]|[CV]|TT}{I|L}ER 5.145 - 881 + 1 1.621 700607.0 0.7799999713897705 4965 5304 10256 HBL1_DMSO_200M_050219_1,10271 HBL1_DMSO_200M_050219_1,10271,RKDLICEF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10272 53.705 800.0 151120.0 25 0 15507.0 28833 QAEQYLEINP 10 157 602.7936950137275 1203.572837094255 2 602.7930175662041 MULTI CID FTMS 0 0 0 10256 130018.6875 1.0 0 0.0 16 Unmodified _QAEQYLEINP_ ENSG00000172828|ENST00000303334|CES3;nc|ENSG00000172828|Q6UWW8-2|CES3 11.494710602746466 0.654671931888957 3 C{I|L}PVER{I|L} 7 9 29.562 0.0 0.0 2.4562 0.0 0.0 375.12137332648 0.0 375.12137332648 0.0 -3.8690696377912417 -3.8690696377912417 0.0 0 0.3807196863200844 0.0 0.0 0.3807196863200844 C{I|L}PVER{I|L} 2.4562 - 1326 + 1 1.621 88751.1 0.7699999809265137 4966 5304 10256 HBL1_DMSO_200M_050219_1,10272 HBL1_DMSO_200M_050219_1,10272,QAEQYLEINP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10273 53.72 800.0 136120.0 25 0 8291.9 + 32192 RVVDELDNQM 10 149 609.7926672903367 1217.5707816474733 2 609.7935668826103 MULTI CID FTMS 0 0 0 -1 0 17 Unmodified _RVVDELDNQM_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 26.020703789607367 0.3840598856887971 3 DE{I|L}DNQM 7 3 51.56 0.0 0.0 4.2347 0.0 0.0 354.2385121076188 0.0 354.2385121076188 0.0 31.425258186338336 0.0 0.0 0 0.2614393726401688 0.0 0.75 0.0 + DE{I|L}DNQM 4.2347 + + 346 1 1.621 82870.2 0.7699999809265137 4967 5304 10256 HBL1_DMSO_200M_050219_1,10273 HBL1_DMSO_200M_050219_1,10273,RVVDELDNQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10274 53.734 800.0 154800.0 25 0 12125.0 -1 0 119 649.9930188812132 1946.9572272438395 3 650.3283569216728 MULTI CID FTMS 0 0 0 10256 123559.046875 1.0 0 0.0 18 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}Y 5 -1 11.496 0.0 0.0 0.59047 0.0 0.0 0.0 1293.629687531202 1293.629687531202 0.6588391123555493 0.0 0.0 0.0 0 0.0 1.154901959985743 0.25 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}Y 0.59047 - 252 1 1.621 99660.2 0.8600000143051147 4968 5304 10256 HBL1_DMSO_200M_050219_1,10274 HBL1_DMSO_200M_050219_1,10274, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10275 53.748 800.0 118920.0 25 0 6353.0 -1 0 116 678.6398529192468 2032.89772935794 3 678.6396972537041 MULTI CID FTMS 0 0 0 10256 117752.40625 1.0 0 0.0 19 3 QAEC(Carbamidomethyl (C)) 4 -1 17.924 0.0 0.0 0.88172 0.0 0.0 1341.6424325823525 200.0567568414672 1541.6991894238197 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 QAEC(Carbamidomethyl (C)) 0.88172 - 1156 + 1 1.621 78285.2 0.8399999737739563 4969 5304 10256 HBL1_DMSO_200M_050219_1,10275 HBL1_DMSO_200M_050219_1,10275, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10276 53.763 800.0 177610.0 25 0 12053.0 + 2308 AQIEVVPSASA 11 171 536.2895416569277 1070.5645303806552 2 536.2900878787041 MULTI CID FTMS 0 0 0 10256 111353.015625 1.0 0 0.0 20 Unmodified _AQIEVVPSASA_ ENSG00000197958|ENST00000361436|RPL12;ENST00000495231.1_1_14:35209757-35209856:-|nuORF 20.41088430110776 0.6105771140609675 3 [QA]{I|L}EVV 6 5 29.416 0.0 0.0 2.7477 0.0 0.0 0.0 428.1834018008303 428.1834018008303 17.786596949921215 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.6747425010840047 + [QA]{I|L}EVV 2.7477 + + 2028 1 1.621 112790.9 0.8299999833106995 4970 5304 10256 HBL1_DMSO_200M_050219_1,10276 HBL1_DMSO_200M_050219_1,10276,AQIEVVPSASA False True AQIEVVPSASA 53.762999 536.290087878704 808239.0625 10256.0 ENST00000495231.1_1_14:35209757-35209856:-|nuORF;;ENSG00000197958|ENST00000361436|RPL12 4.911081155141194 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10278 53.767 4.8 9958800.0 25 0 579930.0 + 2486 AQYEHDLEV 9 81 552.2536401695696 1102.4927274059391 2 552.2541992068291 MULTI CID FTMS 0 0 0 10277 12180490.0 1.0 0 0.0 1 Unmodified _AQYEHDLEV_ ENSG00000132341|ENST00000543796|RAN;ENST00000413691.2_1_4:174554896-174555010:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 36.506200033944 0.094635877243972 3 {NN|[MP]|[D{I|L}]|[EV]}HEY[QA]EV 9 6 + 41.154 0.0 0.0 3.7328 3.7328 71.623 0.0 0.0 0.0 8.696662315049927 10.76992174712749 8.696662315049927 1.817496819840649 0 0.2614393726401688 1.0457574905606752 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}HEY[QA]EV;{NN|[MP]|[D{I|L}]|[EV]}HEYE[QA]V;{[YC]|[HE]}YD[QA]{I|L}EV;{[YC]|[HE]}YD{I|L}[QA]EV;[HD]EY[QA]{I|L}EV;[HD]EY{I|L}[QA]EV;[HD]{I|L}EY[QA]EV;{[YC]|[HE]}YD{I|L}E[QA]V;[HD]EY{I|L}E[QA]V;[HD]{I|L}EYE[QA]V 3.7328;3.568;2.944;2.944;2.8561;2.8561;2.7843;2.7792;2.6913;2.6194 -;-;-;-;-;-;-;-;-;- 706 1 1.617 42229.3 1.0 4971 5305 10277 HBL1_DMSO_200M_050219_1,10278 HBL1_DMSO_200M_050219_1,10278,AQYEHDLEV True True AQYEHDLEV 53.76732 552.254199206829 206272672.0 10277.0 ENST00000413691.2_1_4:174554896-174555010:-|nuORF;;ENST00000455094.1_1_6:30454046-30454364:+|nuORF;;ENSG00000132341|ENST00000543796|RAN 6.917805035909017 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10279 53.768 12.0 7230900.0 25 0 1782900.0 + 15064 IMHIQSNFL 9 94 368.194404519104 1101.5613841575118 3 368.1943542361259 MULTI CID FTMS 0 0 0 10277 4725104.0 0.2675870173827496 -6 0.6978721618652344 2 Unmodified _IMHIQSNFL_ REV__ENSG00000157578|ENST00000288350|LCA5L 21.74664581756881 0.2544899275067181 3 QE{M(Oxidation (M))|F}{I|L} 4 -1 26.753 0.0 0.0 2.4286 0.0 0.0 566.300096580275 0.0 566.300096580275 0.0 10.834909110043329 0.0 0.0 0 0.2742275032520141 0.0 0.3252574989159953 0.805462187404089 QE{M(Oxidation (M))|F}{I|L} 2.4286 - 475 1 1.617 74761.5 1.0 4972 5305 10277 HBL1_DMSO_200M_050219_1,10279 HBL1_DMSO_200M_050219_1,10279,IMHIQSNFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10280 53.77 10.0 5455000.0 25 0 857680.0 + 44898 YPPPEVRNI 9 49 542.7931421868918 1083.5717314405836 2 542.7932006716728 MULTI CID FTMS 0 0 0 10277 5558926.5 0.1169965631726233 -6 0.6978721618652344 3 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 15.738622578938676 0.4106572216562794 3 YPPPE 5 4 63.003 0.0 0.0 5.8144 0.0 0.0 0.0 497.2845858209594 497.2845858209594 46.80523450795789 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + YPPPE 5.8144 + + 39 + 1 1.617 54120.0 1.0 4973 5305 10277 HBL1_DMSO_200M_050219_1,10280 HBL1_DMSO_200M_050219_1,10280,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10281 53.771 40.0 2815400.0 25 0 424720.0 + 35409 STIPTKLVS 9 100 473.2845340313317 944.5545151294634 2 473.2845336794853 MULTI CID FTMS 0 0 0 10277 1353482.375 0.0452986265920156 -6 0.6978721618652344 4 Unmodified _STIPTKLVS_ REV__ENSG00000140836|ENST00000268489|ZFHX3 51.629811660486645 0.0367964933207742 3 {[MG]|[TS]}{I|L}PTVTKV 9 -1 + 54.79 0.0 0.0 5.8006 5.8006 88.254 0.0 0.0 0.0 35.83134222585434 9.027332985730451 9.027332985730451 10.511525224473814 0 1.2887254899964358 0.0 0.75 0.0 {[MG]|[TS]}{I|L}PTVTKV;{[MG]|[TS]}{I|L}V[TP]TKV;{[MG]|[TS]}{I|L}VA{NN|[MP]|[D{I|L}]|[EV]}KV;{[MG]|[TS]}{I|L}PT[K{I|L}]SV;[YR]VR[{I|L}P]AA 5.8006;4.6877;4.0247;3.3347;0.23121 -;-;-;-;- 509 + 1 1.617 90493.1 1.0 4974 5305 10277 HBL1_DMSO_200M_050219_1,10281 HBL1_DMSO_200M_050219_1,10281,STIPTKLVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10282 53.772 34.0 3655100.0 25 0 392180.0 -1 IPIDDLTMV 9 101 516.7694916361638 1031.5244303391275 2 516.7702514529228 MULTI CID FTMS 0 0 0 10277 1340939.75 0.8880296453640626 -1 0.2047348022460937 5 Oxidation (M) _IPIDDLTM(Oxidation (M))V_ ENSG00000074276|ENST00000261944|CDHR2 28.486842064014134 0.1687311288560894 3 {I|L}P{I|L}GG 5 -1 66.013 0.0 0.0 6.3996 0.0 0.0 0.0 591.2413424127561 591.2413424127561 42.36825951563077 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 {I|L}P{I|L}GG 6.3996 - 137 + 1 1.617 106484.1 1.0 4975 5305 10277 HBL1_DMSO_200M_050219_1,10282 HBL1_DMSO_200M_050219_1,10282,IPIDDLTMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10283 53.774 76.0 948280.0 25 0 152160.0 + 21411 LPGLWGWFG 9 90 344.848674626376 1031.524194479328 3 344.8490783572197 MULTI CID FTMS 0 0 0 10277 779506.1875 1.0 0 0.0 6 Unmodified _LPGLWGWFG_ REV__ENSG00000270806|ENST00000605587|C17orf50 28.17323086031832 0.1727213568982648 3 {I|L}P{I|L}G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]QVV 9 -1 + 63.382 0.0 0.0 6.1445 6.1445 88.185 0.0 0.0 0.0 44.84250962403122 2.3688000063343395 2.3688000063343395 9.208187539523747 0 0.6549471895720985 2.0 0.0 0.0 {I|L}P{I|L}G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]QVV;{I|L}P{I|L}G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][AG]VV;{I|L}P[MT][MN]QVV;{I|L}P[MT]{[C(Carbamidomethyl (C))G]|[NC]}RVV;{I|L}P{[YC]|[HE]}[NP]QVV;[MT]P{I|L}[MN]QVV;[MT]P{I|L}{[C(Carbamidomethyl (C))G]|[NC]}RVV;[MT]P{M(Oxidation (M))|F}[NP]QVV;[MT]P{I|L}[MN][AG]VV;[MT]M{I|L}[NP]QVV 6.1445;5.2518;4.3954;3.9695;3.6411;1.2904;0.86451;0.53604;0.39774;0.17931 -;-;-;-;-;-;-;-;-;- 110 + 1 1.617 67383.9 1.0 4976 5305 10277 HBL1_DMSO_200M_050219_1,10283 HBL1_DMSO_200M_050219_1,10283,LPGLWGWFG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10284 53.776 126.0 361730.0 25 0 43274.0 -1 GAMFSCTECL 10 75 596.2269364654588 1190.4393199977176 2 596.2277709841728 MULTI CID FTMS 0 0 0 10277 684935.25 0.5636051510974882 -1 0.2047348022460937 7 2 Carbamidomethyl (C),Oxidation (M) _GAM(Oxidation (M))FSC(Carbamidomethyl (C))TEC(Carbamidomethyl (C))L_ ENSG00000177370|ENST00000327158|TIMM22 4.3292370932331545 0.7066112369704343 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AE 4 -1 20.005 0.0 0.0 1.6805 0.0 0.0 0.0 728.2362614862519 728.2362614862519 3.790302401096852 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AE 1.6805 - 64 1 1.617 39959.5 1.0 4977 5305 10277 HBL1_DMSO_200M_050219_1,10284 HBL1_DMSO_200M_050219_1,10284,GAMFSCTECL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10285 53.779 110.0 941290.0 25 0 163130.0 + 1108 AGPLETAEL 9 120 450.7368226465683 899.4590923599367 2 450.7375976443291 MULTI CID FTMS 0 0 0 10277 540752.6875 0.2168070158521926 -1 0.2047348022460937 8 Unmodified _AGPLETAEL_ REV__ENST00000318562.12_2_11:727090-727309:+|nuORF 44.40701690623563 0.0526327925666318 3 [AG]PE{I|L}TAE{I|L} 9 -1 + 58.304 0.0 0.0 6.4821 6.4821 77.959 0.0 0.0 0.0 0.6362128735877022 16.478174818886366 0.6362128735877022 0.4672033070727295 0 0.4247425010840047 1.0969100130080565 0.8807196863200843 0.0 [AG]PE{I|L}TAE{I|L};[AG]PETA{I|L}E{I|L};[AG]PET{I|L}AE{I|L};[QP]E{I|L}TAE{I|L};[QP]ETA{I|L}E{I|L};[QP]ET{I|L}AE{I|L};[{I|L}P]QETAE{I|L};[EP]Q{I|L}TAE{I|L};[{I|L}P]EQTAE{I|L};[EP]QTA{I|L}E{I|L} 6.4821;6.4301;6.4239;6.4114;6.3594;6.3531;6.2923;6.1647;6.1534;6.1128 -;-;-;-;-;-;-;-;-;- 1091 1 1.617 84652.2 1.0 4978 5305 10277 HBL1_DMSO_200M_050219_1,10285 HBL1_DMSO_200M_050219_1,10285,AGPLETAEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10286 53.782 159.0 501430.0 25 0 31434.0 -1 RSMELYRNA 9 115 578.2813924311727 1154.5482319291452 2 578.2812377810478 MULTI CID FTMS 0 0 0 10277 518520.78125 0.2621638553226988 -6 0.6978721618652344 9 Oxidation (M) _RSM(Oxidation (M))ELYRNA_ ENSG00000075399|ENST00000389386|VPS9D1;nc|ENSG00000075399|Q9Y2B5-2|VPS9D1 7.289230182591677 0.6602208344931196 3 {[VA]|[{I|L}G]}[HQ]SVP[PA]{[{M(Oxidation (M))|F}C]|[YS]} 11 -1 + 33.512 0.0 0.0 2.9026 2.9026 81.424 0.0 0.0 0.0 18.578861706261023 4.515228367446696 4.515228367446696 18.578861706261023 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}[HQ]SVP[PA]{[{M(Oxidation (M))|F}C]|[YS]};[QA][HV]SVP[PA]{[{M(Oxidation (M))|F}C]|[YS]};[AG]A[HV]SVP[PA]{[{M(Oxidation (M))|F}C]|[YS]};[H{I|L}]{[QG]|[NA]}SVP[PA]{[{M(Oxidation (M))|F}C]|[YS]} 2.9026;1.2934;0.74141;0.56488 -;-;-;- 396 1 1.617 65366.0 1.0 4979 5305 10277 HBL1_DMSO_200M_050219_1,10286 HBL1_DMSO_200M_050219_1,10286,RSMELYRNA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10287 53.786 206.0 352500.0 25 0 95225.0 -1 HPKPFCYL 8 102 531.2636611512619 1060.5127693693237 2 531.2639648318291 MULTI CID FTMS 0 0 0 10277 332875.78125 0.597149129740715 -1 0.2047348022460937 10 Carbamidomethyl (C) _HPKPFC(Carbamidomethyl (C))YL_ ENST00000251473.9_1_19:11476091-11476349:+|nuORF 10.183394434864962 0.7604730176254005 3 {I|L}C 2 -1 20.969 0.0 0.0 1.9773 0.0 0.0 0.0 841.4112032525999 841.4112032525999 11.054266826574466 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}C 1.9773 - 34 + 1 1.617 62010.8 1.0 4980 5305 10277 HBL1_DMSO_200M_050219_1,10287 HBL1_DMSO_200M_050219_1,10287,HPKPFCYL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10288 53.789 173.0 1245700.0 25 0 146630.0 + 4574 DAYSFSRKI 9 135 362.85756516731504 1085.5508661021452 3 362.8576232790947 MULTI CID FTMS 0 0 0 10277 294752.28125 0.0127832018383207 -4 0.5077857971191406 11 Unmodified _DAYSFSRKI_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000538600.1_1_12:6631091-6632090:+|nuORF 45.69961567697781 0.0497987121815769 3 {[DA]|[EG]}YS{M(Oxidation (M))|F}SRK{I|L} 9 0 + 72.247 0.0 0.0 6.6553 6.6553 93.301 0.0 0.0 0.0 44.170064878226434 6.42667503568731 6.42667503568731 27.275071725447404 0 0.3252574989159953 1.6989700043360187 0.4247425010840047 1.4604093769761874 + + {[DA]|[EG]}YS{M(Oxidation (M))|F}SRK{I|L};WYS{I|L}[YN]K{I|L};WY{I|L}S[YN]K{I|L};W{I|L}YS[YN]K{I|L};{[DA]|[EG]}{I|L}[HM]CRK{I|L};{[DA]|[EG]}{I|L}[HM]RKC{I|L};{[DA]|[EG]}{I|L}[HM]KRC{I|L};{[DA]|[EG]}[TP]WQQK{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}A][{I|L}T]SY{[QG]|[NA]} 6.6553;4.1428;3.8942;3.1969;2.9388;2.7766;2.5886;1.4693;0.44976 +;-;-;-;-;-;-;-;- + 498 + 1 1.617 173451.4 1.0 4981 5305 10277 HBL1_DMSO_200M_050219_1,10288 HBL1_DMSO_200M_050219_1,10288,DAYSFSRKI True True DAYSFSRKI 53.78912 362.857623279095 2121469312.0 10277.0 ENST00000538600.1_1_12:6631091-6632090:+|nuORF;;ENSG00000010292|ENST00000315579|NCAPD2 6.937240918477376 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10289 53.801 708.0 811720.0 25 0 138900.0 + + 9014 KSLGSLPKV 9 227 465.2234754086349 928.4323978840698 2 465.2240478396416 MULTI CID FTMS 0 0 0 10277 280646.375 0.9574756467346012 -1 0.2047348022460937 12 Unmodified _FDCVIYAV_ nc|ENSG00000011007|Q14241-1|ELOA;ENSG00000011007|ENST00000613537|ELOA 10.183394434864962 0.7604730176254005 3 MSVMPKV 7 -1 18.391 0.0 0.0 1.9808 0.0 0.0 138.04877735078657 0.0 138.04877735078657 0.0 2.015549043553584 0.0 0.0 0 0.0 0.0 0.0 0.0 MSVMPKV 1.9808 - 1571 + 1 1.617 436730.0 1.0 4982 5305 10277 HBL1_DMSO_200M_050219_1,10289 HBL1_DMSO_200M_050219_1,10289,FDCVIYAV False False KSLGSLPKV 53.801408 465.224047839642 3616177.5 10277.0 nc|ENSG00000011007|Q14241-1|ELOA;;ENSG00000011007|ENST00000613537|ELOA 2.596292495727539 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10290 53.806 218.0 377060.0 25 0 37652.0 + -1 QNQYELFMEVM 11 108 732.3129326918261 1462.611312450452 2 732.8113891482353 MULTI CID FTMS 0 0 0 10277 278239.1875 0.0803501257423651 -8 0.8984260559082031 13 2 Oxidation (M) _QNQYELFM(Oxidation (M))EVM(Oxidation (M))_ REV__ENSG00000152253|ENST00000282074|SPC25;REV__ENST00000479309.6_1_2:169690730-169745796:-|nuORF 5.731851221503515 0.8481046878870278 3 {[QG]|[NA]}GHDEAQAGNA 12 -1 85.494 0.0 0.0 5.8453 0.0 0.0 0.0 324.1202551021808 324.1202551021808 60.50273794990356 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.2396518287104437 2.085831738528788 {[QG]|[NA]}GHDEAQAGNA 5.8453 - 7945 1 1.617 61860.3 1.0 4983 5305 10277 HBL1_DMSO_200M_050219_1,10290 HBL1_DMSO_200M_050219_1,10290,QNQYELFMEVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10291 53.811 308.0 676000.0 25 0 50545.0 + 21854 LPPEKYMRV 9 164 378.21111069880914 1131.6115026966274 3 378.2105895876884 MULTI CID FTMS 0 0 0 10277 283070.21875 0.210782121360652 -6 0.6978721618652344 14 Unmodified _LPPEKYMRV_ ENSG00000139618|ENST00000380152|BRCA2 39.94969957227396 0.0757326808254658 3 {I|L}PPEKYMRV 9 0 + 85.104 0.0 0.0 7.5206 7.5206 92.992 0.0 0.0 0.0 36.47817481888637 9.488474775526186 9.488474775526186 9.488474775526186 0 0.3494850021680094 2.0 0.3807196863200844 0.0 + + {I|L}PPEKYMRV;{I|L}PPEKVYRM;{I|L}PPEKYVRM;{I|L}PPEKVY{[MG]|[TS]}V;{I|L}PPV{[SA]|[TG]}YMRV;{I|L}PPEVKYRM;{I|L}PPEKYV{[MG]|[TS]}V;{I|L}PPEVKY{[MG]|[TS]}V;{I|L}PPVEKYRM;{I|L}PVP{[SA]|[TG]}YMRV 7.5206;6.6821;6.5265;6.4861;6.4409;6.4161;6.3304;6.22;6.1501;6.1258 +;-;-;-;-;-;-;-;-;- + 1949 + 1 1.617 181206.4 1.0 4984 5305 10277 HBL1_DMSO_200M_050219_1,10291 HBL1_DMSO_200M_050219_1,10291,LPPEKYMRV True True LPPEKYMRV 53.811153 378.210589587688 47271492.0 10277.0 ENSG00000139618|ENST00000380152|BRCA2 8.46883233388265 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10292 53.824 724.0 320590.0 25 0 26270.0 + 23629 LTQEQLHQL 9 190 555.3008461870375 1108.5871394408748 2 555.3002807497978 MULTI CID FTMS 0 0 0 10277 216999.859375 1.0 0 0.0 15 Unmodified _LTQEQLHQL_ ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 75.76082778847304 0.0188720312721366 3 {I|L}TQEQ{I|L}HQ{I|L} 9 0 + 82.078 0.0 0.0 7.4039 7.4039 91.911 0.0 0.0 0.0 37.25895023531386 11.099942611936712 11.099942611936712 9.208187539523747 0 0.7059771852360797 2.0 1.174742501084005 1.295114016114533 + + {I|L}TQEQ{I|L}HQ{I|L};{I|L}T[AG]EQ{I|L}HQ{I|L};{I|L}TQE[AG]{I|L}HQ{I|L};{I|L}TQEQ{I|L}H[AG]{I|L};{I|L}TQEQ{I|L}HAAV;{I|L}T[AG]E[AG]{I|L}HQ{I|L};{I|L}TQEQ[YK]S{I|L};{I|L}T[AG]EQ{I|L}H[AG]{I|L};[{I|L}T]{M(Oxidation (M))|F}HHQ{I|L}T{I|L};{I|L}TQEQ[YK]TV 7.4039;6.5732;6.5732;6.3571;5.8587;5.7466;5.5522;5.5304;5.3909;5.0538 +;-;-;-;-;-;-;-;-;- + 7796 + 1 1.617 174284.2 1.0 4985 5305 10277 HBL1_DMSO_200M_050219_1,10292 HBL1_DMSO_200M_050219_1,10292,LTQEQLHQL True True LTQEQLHQL 53.82371 555.300280749798 1091385.25 10277.0 nc|ENSG00000204843|Q14203-3|DCTN1;;ENSG00000204843|ENST00000628224|DCTN1;;nc|ENSG00000204843|Q14203-4|DCTN1;;nc|ENSG00000204843|Q14203-2|DCTN1;;nc|ENSG00000204843|Q14203-6|DCTN1;;nc|ENSG00000204843|Q14203-5|DCTN1 6.453428268432617 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10293 53.839 800.0 329640.0 25 0 32347.0 + 33328 SFYDGYRHEM 10 188 435.51672455107774 1303.5283442534333 3 435.5171386599541 MULTI CID FTMS 0 0 0 10277 210713.875 1.0 0 0.0 16 Unmodified _SFYDGYRHEM_ ENSG00000142657|ENST00000270776|PGD;ENST00000496718.1_1_1:10478943-10479617:+|nuORF;nc|ENSG00000142657|P52209-2|PGD 57.2037768669896 0.0439211711061507 3 S{M(Oxidation (M))|F}YDHYRGEM 10 2 + 67.363 0.0 0.0 5.1677 5.1677 76.763 0.0 0.0 0.0 9.64002346728482 7.122213499699875 7.122213499699875 2.340832060333682 0 0.2742275032520141 0.0 1.4604093769761877 0.5796896906561032 S{M(Oxidation (M))|F}YDHYRGEM;S{M(Oxidation (M))|F}YDYGRHEM;S{M(Oxidation (M))|F}YDGYRHEM;S{M(Oxidation (M))|F}YDYHRGEM;S{M(Oxidation (M))|F}M{M(Oxidation (M))|F}HYRGEM;S{M(Oxidation (M))|F}M{M(Oxidation (M))|F}GYRHEM;S{M(Oxidation (M))|F}M{M(Oxidation (M))|F}YGRHEM;S{M(Oxidation (M))|F}YDM{M(Oxidation (M))|F}H{[QV]|[N{I|L}]|[RA]|[KV]}M;S{M(Oxidation (M))|F}YDM{M(Oxidation (M))|F}H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;S{M(Oxidation (M))|F}M{M(Oxidation (M))|F}YHRGEM 5.1677;4.9882;4.9882;4.9368;4.8081;4.6286;4.6286;4.6214;4.6214;4.5772 -;-;+;-;-;-;-;-;-;- + 4450 + 1 1.617 206356.0 0.9200000166893004 4986 5305 10277 HBL1_DMSO_200M_050219_1,10293 HBL1_DMSO_200M_050219_1,10293,SFYDGYRHEM True True SFYDGYRHEM 53.838699 435.517138659954 1770597.375 10277.0 ENSG00000142657|ENST00000270776|PGD;;nc|ENSG00000142657|P52209-2|PGD;;ENST00000496718.1_1_1:10478943-10479617:+|nuORF 8.54616896311442 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10294 53.843 232.0 277520.0 25 0 24975.0 44959 YPQLKRVWGV 10 92 415.9082101762759 1244.7028011290276 3 415.9081298708916 MULTI CID FTMS 0 0 0 10277 212158.6875 0.3909963259783406 1 -0.1226463317871093 17 Unmodified _YPQLKRVWGV_ ENST00000517831.5_1_8:86132826-86132958:+|nuORF 6.630372943996041 0.695967137280542 3 YP 2 8 15.969 0.0 0.0 1.283 0.0 0.0 439.2781769846369 542.2872849520303 981.5654619366672 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + YP 1.283 + + 132 + 1 1.617 58106.7 1.0 4987 5305 10277 HBL1_DMSO_200M_050219_1,10294 HBL1_DMSO_200M_050219_1,10294,YPQLKRVWGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10295 53.857 800.0 173380.0 25 0 36188.0 + -1 WLNQYCSHAFY 11 115 744.8247610243016 0 744.8208495974541 PEAK CID FTMS 0 0 0 10277 141317.125 1.0 0 0.0 18 Carbamidomethyl (C) _WLNQYC(Carbamidomethyl (C))SHAFY_ REV__ENSG00000091128|ENST00000388781|LAMB4;REV__ENST00000475469.1_1_7:107703197-107763609:-|nuORF;REV__nc|ENSG00000091128|A4D0S4-3|LAMB4 12.240655878213236 0.4295705806160874 3 ADQQAEDH 8 -1 61.095 0.0 0.0 4.1068 0.0 0.0 328.1382468477546 262.1199740045532 590.2582208523078 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 1.2302046884880935 ADQQAEDH 4.1068 - 1690 + 1 1.617 101243.4 0.800000011920929 4988 5305 10277 HBL1_DMSO_200M_050219_1,10295 HBL1_DMSO_200M_050219_1,10295,WLNQYCSHAFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10296 53.872 800.0 190700.0 25 0 22409.0 -1 0 142 569.3144123479617 568.3071358813617 1 569.3156005740166 MULTI CID FTMS 0 0 0 10277 140769.84375 0.0503415973703039 8 -0.677154541015625 19 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KK 4 -1 + 20.458 0.0 0.0 3.5997 3.5997 83.084 0.0 0.0 0.0 10.078971335916158 10.426096005224707 10.078971335916158 20.457574905606748 0 0.0 1.6989700043360187 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KK 3.5997 - 88 1 1.617 114289.3 0.8700000047683716 4989 5305 10277 HBL1_DMSO_200M_050219_1,10296 HBL1_DMSO_200M_050219_1,10296, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10297 53.886 800.0 110040.0 25 0 10005.0 3241 AYDLQSDNVYR 11 127 672.3144265477721 1342.614300162344 2 672.3151122927666 MULTI CID FTMS 0 0 0 10277 132824.015625 0.1866343004982045 11 -0.9460525512695312 20 Unmodified _AYDLQSDNVYR_ ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB 8.155526934196011 0.8366696279279818 3 [DV]{I|L}DE 5 8 11.628 0.0 0.0 0.86611 0.0 0.0 0.0 768.3306447270503 768.3306447270503 -1.831757371527868 0.0 -1.831757371527868 0.0 0 0.0 0.8239087409443188 0.0 0.0 [DV]{I|L}DE 0.86611 - 614 1 1.617 67714.6 0.8600000143051147 4990 5305 10277 HBL1_DMSO_200M_050219_1,10297 HBL1_DMSO_200M_050219_1,10297,AYDLQSDNVYR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10299 53.89 1.8 43636000.0 25 0 7952000.0 + 37052 TGFSPRQI 8 73 453.2454977186477 904.4764425040954 2 453.2459899783134 MULTI CID FTMS 0 0 0 10298 37489980.0 1.0 0 0.0 1 Unmodified _TGFSPRQI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 96.28474662873226 0.07713372045102 3 TG{M(Oxidation (M))|F}SPRQ{I|L} 8 0 + 85.965 0.0 0.0 9.5044 9.5044 96.222 0.0 0.0 0.0 60.02295073620742 16.54036302641009 16.54036302641009 11.658656145495245 0 1.274227503252014 1.5228787452803376 0.3494850021680094 1.3065533887547016 + + TG{M(Oxidation (M))|F}SPRQ{I|L};TG{M(Oxidation (M))|F}SPR[AG]{I|L};T[YQ]PRQ{I|L};T[YQ]PR[AG]{I|L} 9.5044;8.2154;3.542;2.2455 +;-;-;- + 135 + 1 1.617 66642.2 1.0 4991 5306 10298 HBL1_DMSO_200M_050219_1,10299 HBL1_DMSO_200M_050219_1,10299,TGFSPRQI True True TGFSPRQI 53.889969 453.245989978313 1975853920.0 10298.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 3.807740688323975 2.0 True 8.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10300 53.891 6.4 19691000.0 25 0 4821200.0 + 15393 IPPDQQRLI 9 69 540.3145428572215 1078.6145327812428 2 540.3144409060478 MULTI CID FTMS 0 0 0 10298 12093761.0 0.2322044079695878 -5 0.63043212890625 2 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 27.628801355627647 0.1796483985696185 3 {I|L}PPDQQ[R{I|L}]{I|L} 9 0 + 71.208 0.0 0.0 6.6018 6.6018 89.633 0.0 0.0 0.0 59.94854431422095 2.0065945054641787 2.0065945054641787 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + + {I|L}PPDQQ[R{I|L}]{I|L};{I|L}PPDQ[AG][R{I|L}]{I|L};{I|L}PPD[AG]Q[R{I|L}]{I|L} 6.6018;5.7481;5.7481 +;-;- + 62 + 1 1.617 108018.0 1.0 4992 5306 10298 HBL1_DMSO_200M_050219_1,10300 HBL1_DMSO_200M_050219_1,10300,IPPDQQRLI False True IPPDQQRLI 53.891148 540.314440906048 4592180800.0 10298.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC 5.81813383102417 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10301 53.892 1.6 68682000.0 25 0 11598000.0 + 4576 DAYSFSRKI 9 93 543.7826873787078 1085.5508218242155 2 543.7838622927666 MULTI CID FTMS 0 0 0 10298 40862384.0 0.3258091907339978 -3 0.3744583129882812 3 Unmodified _DAYSFSRKI_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000538600.1_1_12:6631091-6632090:+|nuORF 70.33199760932243 0.0209706178985989 3 DAYS{M(Oxidation (M))|F}SR[K{I|L}] 9 0 + 79.095 0.0 0.0 7.2862 7.2862 91.55 0.0 0.0 0.0 31.50855686070713 5.268069021539688 5.268069021539688 9.208187539523747 0 1.1861818737241734 1.6989700043360187 0.805462187404089 0.3807196863200844 + + DAYS{M(Oxidation (M))|F}SR[K{I|L}];DAYS{M(Oxidation (M))|F}S[VG][K{I|L}];DAYS{I|L}[YN][K{I|L}];DAY{I|L}S[YN][K{I|L}];{[DA]|[EG]}YKK{I|L}YW;{[DA]|[EG]}YKKY{I|L}W;D{M(Oxidation (M))|F}SS{M(Oxidation (M))|F}SR[K{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DKK{I|L}YW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DKKY{I|L}W;D{M(Oxidation (M))|F}SS{M(Oxidation (M))|F}S[VG][K{I|L}] 7.2862;6.4379;6.0601;5.771;5.5639;5.2866;4.7018;4.4399;4.1626;3.8536 +;-;-;-;-;-;-;-;-;- + 474 + 1 1.617 87921.6 1.0 4993 5306 10298 HBL1_DMSO_200M_050219_1,10301 HBL1_DMSO_200M_050219_1,10301,DAYSFSRKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10302 53.894 19.0 3007800.0 25 0 290270.0 + -1 TPRNGEPLI 9 67 498.7775365986361 995.5405202640724 2 498.7774536013603 MULTI CID FTMS 0 0 0 10298 3492411.5 0.7494668028223586 1 -0.0965995788574218 4 Oxidation (M) _PLAPM(Oxidation (M))EPLL_ ENSG00000148606|ENST00000372371|POLR3A 38.15118350030904 0.0856056900103839 3 [{I|L}P][WE]EP{I|L}{I|L} 8 -1 + 60.367 0.0 0.0 6.0637 6.0637 89.578 0.0 0.0 0.0 15.686362358410122 42.29486901908295 15.686362358410122 12.501225267834002 0 1.274227503252014 1.6989700043360187 0.0 0.0 [{I|L}P][WE]EP{I|L}{I|L};[{I|L}P][HA][MT]T{I|L}{I|L};[{I|L}P]{[CP]|[EA]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}{I|L};[TP][QP][KC]P{I|L}{I|L} 6.0637;4.808;4.7637;4.0034 -;-;-;- 87 1 1.617 50877.9 1.0 4994 5306 10298 HBL1_DMSO_200M_050219_1,10302 HBL1_DMSO_200M_050219_1,10302,PLAPMEPLL False False TPRNGEPLI 53.893505 498.77745360136 157386588.0 10298.0 ENSG00000148606|ENST00000372371|POLR3A 2.867860039075216 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10303 53.895 24.0 1768200.0 25 0 152950.0 + 2167 AQAEVYKEL 9 73 525.7772468787024 1049.539940824205 2 525.7772704958916 MULTI CID FTMS 0 0 0 10298 2560854.5 0.5406473928959625 1 -0.0965995788574218 5 Unmodified _AQAEVYKEL_ ENSG00000169710|ENST00000306749|FASN 32.78568957990786 0.1150597335874693 3 [QA]A{NN|[MP]|[D{I|L}]|[EV]}Y 6 3 34.151 0.0 0.0 3.2539 0.0 0.0 0.0 385.2099424572768 385.2099424572768 20.17162251838325 0.0 0.0 0.0 0 0.8807196863200843 0.8860566476931632 0.3807196863200844 0.0 + [QA]A{NN|[MP]|[D{I|L}]|[EV]}Y 3.2539 + + 68 + 1 1.617 36776.8 1.0 4995 5306 10298 HBL1_DMSO_200M_050219_1,10303 HBL1_DMSO_200M_050219_1,10303,AQAEVYKEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10304 53.896 25.0 2658500.0 25 0 430630.0 + 34667 LPSQVSRVV 9 81 492.74319510731857 983.4718372814372 2 492.7431823611259 MULTI CID FTMS 0 0 0 10298 2497614.0 1.0 0 0.0 6 Unmodified _SPQTPWTPA_ ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2 24.020572477871973 0.2255576514309169 3 [PS]D{M(Oxidation (M))|F}[H{I|L}]T[PA] 9 4 + 23.596 0.0 0.0 2.3993 2.3993 49.266 0.0 0.0 0.0 0.4575749056067515 1.1169621045833438 0.4575749056067515 0.0 0 0.0 1.0457574905606752 0.3807196863200844 0.0 [PS]D{M(Oxidation (M))|F}[H{I|L}]T[PA];[PS]D[H{I|L}]{M(Oxidation (M))|F}T[PA];[PS]D{M(Oxidation (M))|F}T[H{I|L}][PA];[DP]S[H{I|L}]{M(Oxidation (M))|F}T[PA];[DP]S{M(Oxidation (M))|F}[H{I|L}]T[PA];[DP]S{M(Oxidation (M))|F}T[H{I|L}][PA];[PS]Q[{I|L}P]{[CA]|SS}T[PA];[H{I|L}][C(Carbamidomethyl (C))H][H{I|L}][PA];WT{[CA]|SS}[{I|L}P]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[VS][H{I|L}]EMT[PA] 2.3993;2.3993;2.3818;2.3528;2.3528;2.3352;1.5123;0.93081;0.8563;0.65374 -;-;-;-;-;-;-;-;-;- 173 1 1.617 55697.9 1.0 4996 5306 10298 HBL1_DMSO_200M_050219_1,10304 HBL1_DMSO_200M_050219_1,10304,SPQTPWTPA False False LPSQVSRVV 53.895863 492.743182361126 42567752.0 10298.0 ENSG00000184432|ENST00000333188|COPB2;;nc|ENSG00000184432|P35606-2|COPB2 3.991595904032389 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10305 53.897 33.0 2123700.0 25 0 593540.0 -1 0 60 351.72933715742903 701.4441213816581 2 351.7290527224541 MULTI CID FTMS 0 0 0 10298 2135705.25 0.8125184099719203 -1 0.1226463317871093 7 3 TV{I|L}{I|L}TR 6 -1 + 67.6 0.0 0.0 9.6373 9.6373 99.382 0.0 0.0 0.0 56.34097812983672 12.294869019082952 12.294869019082952 67.60003799480572 0 0.4247425010840047 2.0 0.4247425010840047 0.0 TV{I|L}{I|L}TR 9.6373 - 50 + 1 1.617 61638.9 1.0 4997 5306 10298 HBL1_DMSO_200M_050219_1,10305 HBL1_DMSO_200M_050219_1,10305, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10306 53.898 49.0 1131100.0 25 0 88418.0 + 21256 LPDTMSLTV 9 88 488.7531214727471 975.4916900122944 2 488.7531616091728 MULTI CID FTMS 0 0 0 10298 1958258.375 0.4337962374802998 8 -0.6203804016113281 8 Unmodified _LPDTMSLTV_ REV__ENSG00000134376|ENST00000367400|CRB1;REV__nc|ENSG00000134376|P82279-2|CRB1;REV__nc|ENSG00000134376|P82279-3|CRB1;REV__nc|ENSG00000134376|P82279-4|CRB1 44.40701690623563 0.0526327925666318 3 [EP]PYAS{I|L}TV 9 -1 + 39.491 0.0 0.0 4.0484 4.0484 52.658 0.0 0.0 0.0 1.383026981662816 8.697114610913495 1.383026981662816 0.0 0 0.8182503180159344 0.0 0.9247425010840048 0.0 [EP]PYAS{I|L}TV;[EP]YPAS{I|L}TV;[EP]YPA{I|L}STV;[EP]PYA{I|L}STV;{[HG]|PP}EYAS{I|L}TV;{[HG]|PP}EYA{I|L}STV;[EP]YAPS{I|L}TV;[{I|L}P][EP]YASTV;[EP]YP{I|L}ASTV;[EP]PY{I|L}ASTV 4.0484;4.0484;3.9215;3.9215;3.9066;3.7798;3.7398;3.62;3.613;3.613 -;-;-;-;-;-;-;-;-;- 462 1 1.617 48314.9 1.0 4998 5306 10298 HBL1_DMSO_200M_050219_1,10306 HBL1_DMSO_200M_050219_1,10306,LPDTMSLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10307 53.9 44.0 1151600.0 25 0 88973.0 + 44495 YPASIVHQV 9 95 507.2742830540504 1012.5340131749008 2 507.2746459841728 MULTI CID FTMS 0 0 0 10298 1468468.875 1.0 0 0.0 9 Unmodified _YPASIVHQV_ ENSG00000064393|ENST00000406875|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2 56.17704186161178 0.0281986971544335 3 YPAVTVHQV 9 2 + 79.897 0.0 0.0 7.8908 7.8908 87.683 0.0 0.0 0.0 61.1117824785898 17.32447808893326 17.32447808893326 4.247425010840047 0 0.7302046884880937 2.0 0.4247425010840047 1.1549471895720984 YPAVTVHQV;YPAS{I|L}VHQV;YPA[HK]R{[QN]|[E{I|L}]|[KN]};YPAVTVH[AG]V;YPAS{I|L}VH[AG]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R[YR]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{NN|[MP]|[D{I|L}]|[EV]}[RP]TVA{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}[RP]{I|L}SA{[QN]|[E{I|L}]|[KN]};[PA]S[{I|L}V][DV]A{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]AGVYQV 7.8908;7.4713;5.9437;5.8407;5.4213;2.8863;2.4791;2.0596;1.874;1.8171 -;+;-;-;-;-;-;-;-;- + 214 + 1 1.617 47638.1 1.0 4999 5306 10298 HBL1_DMSO_200M_050219_1,10307 HBL1_DMSO_200M_050219_1,10307,YPASIVHQV True True YPASIVHQV 53.899563 507.274645984173 58397382.0 10298.0 nc|ENSG00000064393|Q9H2X6-3|HIPK2;;ENSG00000064393|ENST00000406875|HIPK2 7.783245245615642 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10308 53.901 43.0 1086600.0 25 0 174500.0 + 22017 LPPPPPPAM 9 73 458.7515933437354 915.4886337542708 2 458.7516052126884 MULTI CID FTMS 0 0 0 10298 1367874.5 0.1954467865521702 12 -1.0118141174316406 10 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 3 [{I|L}P]PPPP[PA]M 9 0 [{I|L}P]P + + 29.359 21.796 7.0952 3.2069 3.2069 50.589 0.0 0.0 0.0 0.0 7.562893943202624 0.0 0.0 0 1.5 0.0 0.0 0.0 + + [{I|L}P]PPPP[PA]M 3.2069 + + 75 + 1 1.617 43219.2 1.0 5000 5306 10298 HBL1_DMSO_200M_050219_1,10308 HBL1_DMSO_200M_050219_1,10308,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10309 53.903 81.0 1056000.0 25 0 159020.0 + 15229 IPFSKPVKV 9 89 338.88333375638865 1013.628171869366 3 338.8829223513603 MULTI CID FTMS 0 0 0 10298 758998.1875 0.0963103697901945 -5 0.63043212890625 11 Unmodified _IPFSKPVKV_ ENSG00000149262|ENST00000534064|INTS4 27.628801355627647 0.1796483985696185 3 {I|L}P{M(Oxidation (M))|F}SK[VP]KV 9 0 + 55.556 0.0 0.0 5.4809 5.4809 77.703 0.0 0.0 0.0 26.478174818886373 2.218487496163561 2.218487496163561 2.218487496163561 0 0.0 1.0 0.3494850021680094 0.0 + + {I|L}P{M(Oxidation (M))|F}SK[VP]KV;{I|L}P{M(Oxidation (M))|F}SK[VP]VK;{I|L}V[MT]K[VP]KV;{I|L}V[MT]K[VP]VK 5.4809;5.2621;2.6754;2.4565 +;-;-;- + 260 + 1 1.617 82879.6 1.0 5001 5306 10298 HBL1_DMSO_200M_050219_1,10309 HBL1_DMSO_200M_050219_1,10309,IPFSKPVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10310 53.904 70.0 938240.0 25 0 62635.0 + 2388 AQNTIVPKV 9 97 485.29015742980096 968.565761926402 2 485.2903015017509 MULTI CID FTMS 0 0 0 10298 482396.5 0.8743528881869405 1 -0.0965995788574218 12 Unmodified _AQNTIVPKV_ ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000529672.1_1_11:111613245-111618714:-|nuORF;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 17.11289562659939 0.3734572693229295 3 {I|L}C(Carbamidomethyl (C))V[KP] 5 6 14.041 0.0 0.0 1.4497 0.0 0.0 353.2321034162125 0.0 353.2321034162125 0.0 1.2768589188000945 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}C(Carbamidomethyl (C))V[KP] 1.4497 - 214 1 1.617 57347.8 1.0 5002 5306 10298 HBL1_DMSO_200M_050219_1,10310 HBL1_DMSO_200M_050219_1,10310,AQNTIVPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10311 53.913 493.0 648010.0 25 0 152690.0 + 9093 FFIETGRPK 9 167 365.5382677817877 1093.5929739455632 3 365.5380126833916 MULTI CID FTMS 0 0 0 10298 471817.3125 0.9075180715852428 -1 0.1226463317871093 13 Unmodified _FFIETGRPK_ ENST00000412272.6_1_10:69832876-69833427:-|nuORF 42.312485326615175 0.0627620958981271 3 {M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ET[VP]NK 9 3 + 56.853 0.0 0.0 5.1987 5.1987 78.779 0.0 0.0 0.0 30.12091247345687 5.842332448825616 5.842332448825616 3.450980400142569 0 0.3807196863200844 0.0 0.7742275032520141 0.9140002327357096 {M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ET[VP]NK;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ET{[NV]|[RG]}PK;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}EKWPK;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}EK{[QS]|[NT]}PV;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}KEWPK;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ET[VP]GGK;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}EK{[DA]|[EG]}PK;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}KE{[QS]|[NT]}PV;VV[KC]KE{I|L}{M(Oxidation (M))|F}E;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}KE{[DA]|[EG]}PK 5.1987;4.8831;4.6949;4.5475;4.4704;4.3567;4.1675;4.0034;3.8039;3.6234 -;+;-;-;-;-;-;-;-;- + 888 + 1 1.617 255195.8 1.0 5003 5306 10298 HBL1_DMSO_200M_050219_1,10311 HBL1_DMSO_200M_050219_1,10311,FFIETGRPK True True FFIETGRPK 53.912951 365.538012683392 5707970.5 10298.0 ENST00000412272.6_1_10:69832876-69833427:-|nuORF 6.886024475097656 3.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10312 53.922 493.0 381560.0 25 0 44293.0 + 8759 EVRQYRHYSFV 11 135 742.3730346560478 0 742.3730346560478 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _EVRQYRHYSFV_ REV__ENSG00000152223|ENST00000282041|EPG5;REV__ENST00000587974.1_1_18:43487913-43547205:-|nuORF;REV__nc|ENSG00000152223|Q9HCE0-2|EPG5 12.240655878213236 0.4295705806160874 3 VQTVS{I|L}E 7 -1 44.927 0.0 0.0 3.03 0.0 0.0 442.18446955388487 281.1261080377563 723.3105775916412 0.0 0.0 0.0 0.0 0 0.0 0.0 2.475772496747986 0.0 VQTVS{I|L}E 3.03 - 2104 + 1 1.617 134465.7 1.0 5004 5306 10298 HBL1_DMSO_200M_050219_1,10312 HBL1_DMSO_200M_050219_1,10312,EVRQYRHYSFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10313 53.93 475.0 255350.0 25 0 28690.0 + 39612 VDNAYQCRSYD 11 103 667.2755580128055 1332.536563092411 2 667.2759887576103 MULTI CID FTMS 0 0 0 10298 445411.28125 0.6938460112507615 1 -0.0965995788574218 15 Unmodified _VDNAYQCRSYD_ REV__ENSG00000152990|ENST00000334304|ADGRA3;REV__ENST00000591780.1_1_18:12075195-12075588:-|nuORF;REV__nc|ENSG00000152990|Q8IWK6-2|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-3|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-4|ADGRA3 10.799506525563784 0.8105043987015127 3 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 71.283 0.0 0.0 5.3494 0.0 0.0 248.09181410957189 0.0 248.09181410957189 0.0 41.434278568220094 0.0 0.0 0 1.1069758080123702 0.0 1.0114393726401687 0.8494850021680094 DEAQQNA{M(Oxidation (M))|F}Y 5.3494 - 1272 1 1.617 93573.4 1.0 5005 5306 10298 HBL1_DMSO_200M_050219_1,10313 HBL1_DMSO_200M_050219_1,10313,VDNAYQCRSYD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10314 53.94 595.0 385820.0 25 0 44533.0 + 21681 IPPEVQRI 8 173 476.28487125370367 950.5551895742074 2 476.2851135134697 MULTI CID FTMS 0 0 0 10298 311690.375 0.5274682897915995 -5 0.63043212890625 16 Unmodified _LPLPDQIR_ nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1 32.30548876998284 0.3644845974844379 3 {I|L}PPEVQR{I|L} 8 5 + 62.592 0.0 0.0 6.5848 6.5848 90.196 0.0 0.0 0.0 50.99861402002212 7.621972805574479 7.621972805574479 9.262137858390815 0 0.4247425010840047 2.0 0.0 0.2742275032520141 {I|L}PPEVQR{I|L};{I|L}PPEV[AG]R{I|L};{I|L}P{I|L}[DP]QR{I|L};{I|L}P[HK]{[MG]|[TS]}R{I|L};{I|L}P{I|L}[DP][AG]R{I|L};{I|L}PPW[K{I|L}]TP;{I|L}{I|L}P[DP]QR{I|L};{I|L}{I|L}P[DP][AG]R{I|L} 6.5848;5.6104;5.2966;4.5028;4.3222;3.9461;2.429;1.4546 -;-;-;-;-;-;-;- 176 + 1 1.617 177043.5 1.0 5006 5306 10298 HBL1_DMSO_200M_050219_1,10314 HBL1_DMSO_200M_050219_1,10314,LPLPDQIR False False IPPEVQRI 53.940488 476.28511351347 24949137.0 10298.0 nc|ENSG00000127463|Q8N766-4|EMC1;;nc|ENSG00000127463|Q8N766-2|EMC1;;ENSG00000127463|ENST00000477853|EMC1;;nc|ENSG00000127463|Q8N766-3|EMC1 3.514233191808065 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10315 53.952 672.0 822870.0 25 0 92034.0 + 24406 MFQNRVRPL 9 280 387.549506438511 1159.626689915733 3 387.5499755740166 MULTI CID FTMS 0 0 0 10298 301827.875 0.0197332772161519 4 -0.3215560913085937 17 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 50.855029805455786 0.0384952370514206 3 M{M(Oxidation (M))|F}Q[RN]VRP{I|L} 9 0 + 37.616 0.0 0.0 3.2438 3.2438 69.268 0.0 0.0 0.0 16.47817481888638 1.1918640771920863 1.1918640771920863 1.1918640771920863 0 0.2302046884880938 0.0 0.0 1.1549471895720984 + + M{M(Oxidation (M))|F}Q[RN]VRP{I|L};M{M(Oxidation (M))|F}Q[RN]VR{I|L}P;M{M(Oxidation (M))|F}Q[RN]VPR{I|L};M{M(Oxidation (M))|F}Q[RN]VP{I|L}R;M{M(Oxidation (M))|F}[AG][RN]VRP{I|L};M{M(Oxidation (M))|F}[AG][RN]VR{I|L}P;M{M(Oxidation (M))|F}Q[RP]{[NV]|[RG]}R{I|L};M{M(Oxidation (M))|F}Q[RP]{[NV]|[RG]}{I|L}R;M{M(Oxidation (M))|F}[AG][RN]VPR{I|L};M{M(Oxidation (M))|F}[AG][RN]VP{I|L}R 3.2438;3.1411;2.5728;2.5179;2.4498;2.347;1.9942;1.9393;1.7787;1.7238 +;-;-;-;-;-;-;-;-;- + 1996 + 1 1.617 430497.6 1.0 5007 5306 10298 HBL1_DMSO_200M_050219_1,10315 HBL1_DMSO_200M_050219_1,10315,MFQNRVRPL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10316 53.955 144.0 1018600.0 25 0 67055.0 + 38135 TPMNPANTI 9 177 479.73664640544 957.45873987768 2 480.2571899294853 MULTI CID FTMS 0 0 0 -1 0 18 Unmodified _TPMNPANTI_ ENSG00000118985|ENST00000237853|ELL2 29.081581746732265 0.1611639662936252 3 [EP]VTNAN 7 6 28.734 0.0 0.0 3.0011 0.0 0.0 0.0 229.12131246973 229.12131246973 10.559805428719535 0.0 0.0 0.0 0 0.3252574989159953 0.958607314841775 0.4247425010840047 0.0 [EP]VTNAN 3.0011 - 2052 1 1.617 115091.7 1.0 5008 5306 10298 HBL1_DMSO_200M_050219_1,10316 HBL1_DMSO_200M_050219_1,10316,TPMNPANTI False True TPMNPANTI 53.955061 480.257189929485 29631014.0 10298.0 ENSG00000118985|ENST00000237853|ELL2 4.667536497116089 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10317 53.969 709.0 351680.0 25 0 40063.0 + 9061 FESENQKLQQK 11 147 689.8532626728903 1377.6919724125803 2 689.8528320193291 MULTI CID FTMS 0 0 0 10298 191367.953125 0.2205645991731908 -5 0.63043212890625 19 Unmodified _FESENQKLQQK_ ENSG00000212710|ENST00000391403|CTAGE1;ENSG00000236761|ENST00000314099|CTAGE9;ENSG00000271079|ENST00000420911|CTAGE15;ENSG00000271321|ENST00000470691|CTAGE6;ENST00000435712.1_1_10:131904549-131906742:+|nuORF;nc|ENSG00000288784|Q8IX94|CTAGE4;nc|ENSG00000289604|P0CG41|CTAGE8 34.40172386719151 0.2986346176549658 3 [{M(Oxidation (M))|F}E]TPPVQSA{M(Oxidation (M))|F}QK 12 7 + 88.697 0.0 0.0 6.4381 6.4381 79.502 0.0 0.0 0.0 59.59142325943557 14.60481173055848 14.60481173055848 1.4259745431819797 0 0.805462187404089 0.0 0.805462187404089 2.0506484875809043 [{M(Oxidation (M))|F}E]TPPVQSA{M(Oxidation (M))|F}QK;[{M(Oxidation (M))|F}E]TPPVQSAQ{M(Oxidation (M))|F}K;[{M(Oxidation (M))|F}E]TPPVQAS{M(Oxidation (M))|F}QK;[{M(Oxidation (M))|F}E]TPPVQAAYQK;[{M(Oxidation (M))|F}E]TPPVSGAA{M(Oxidation (M))|F}QK;[{M(Oxidation (M))|F}E]TPPVQASQ{M(Oxidation (M))|F}K;[{M(Oxidation (M))|F}E]TPPVSGAAQ{M(Oxidation (M))|F}K;[{M(Oxidation (M))|F}E]TPPV[AG]SA{M(Oxidation (M))|F}QK;[{M(Oxidation (M))|F}E]TPPVQSA{M(Oxidation (M))|F}[AG]K;[{M(Oxidation (M))|F}E]TPPV[AG]SAQ{M(Oxidation (M))|F}K 6.4381;6.3346;6.2196;6.1617;6.1284;6.1161;6.0249;5.7777;5.7777;5.6742 -;-;-;-;-;-;-;-;-;- 8310 + 1 1.617 179083.0 1.0 5009 5306 10298 HBL1_DMSO_200M_050219_1,10317 HBL1_DMSO_200M_050219_1,10317,FESENQKLQQK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10318 53.982 800.0 154170.0 25 0 8077.2 -1 LNWVDEMQVQL 11 148 695.8392822146416 0 695.8392822146416 PEAK CID FTMS 0 0 0 -1 0 20 Oxidation (M) _LNWVDEM(Oxidation (M))QVQL_ ENSG00000151914|ENST00000680361|DST;ENST00000521104.1_1_6:56504020-56557947:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;nc|ENSG00000151914|Q03001-13|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-3|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST 29.84058131909904 0.2294714165048734 3 KMVTA 5 -1 27.652 0.0 0.0 1.9898 0.0 0.0 566.2073862109838 290.1513765924438 856.3587628034277 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.3494850021680094 KMVTA 1.9898 - 1248 + 1 1.617 91958.3 0.9399999976158142 5010 5306 10298 HBL1_DMSO_200M_050219_1,10318 HBL1_DMSO_200M_050219_1,10318,LNWVDEMQVQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10320 53.998 760.0 212950.0 25 0 32511.0 -1 ICSDDLQPNL 10 141 587.7724081431645 0 587.7728149294853 PEAK CID FTMS 0 0 0 10319 115124.9765625 0.6531351913886838 1 -0.1475448608398437 1 Carbamidomethyl (C) _IC(Carbamidomethyl (C))SDDLQPNL_ ENSG00000183020|ENST00000448903|AP2A2;nc|ENSG00000183020|O94973-2|AP2A2 8.745405648335112 0.3843311602926832 3 NM{I|L} 3 -1 10.489 0.0 0.0 0.89381 0.0 0.0 587.2457307376977 225.0882814996704 812.334012237368 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 NM{I|L} 0.89381 - 227 + 1 1.614 122693.6 1.0 5011 5307 10319 HBL1_DMSO_200M_050219_1,10320 HBL1_DMSO_200M_050219_1,10320,ICSDDLQPNL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10321 54.0 20.0 3144500.0 25 0 204410.0 + 14513 IGQIKRIL 8 92 314.2151031998742 939.6234801998226 3 314.2148315310478 MULTI CID FTMS 0 0 0 10319 2348229.75 0.1794106775429223 -2 0.2192459106445312 2 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 13.50788311687929 0.7113601687236069 3 K{I|L}K[R{I|L}]{I|L} 6 -1 28.932 0.0 0.0 3.0791 0.0 0.0 170.06846115197192 0.0 170.06846115197192 0.0 21.942059438411903 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.7059771852360797 K{I|L}K[R{I|L}]{I|L} 3.0791 - 32 + 1 1.614 60072.4 1.0 5012 5307 10319 HBL1_DMSO_200M_050219_1,10321 HBL1_DMSO_200M_050219_1,10321,IGQIKRIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10322 54.001 25.0 1707000.0 25 0 159250.0 + 9926 FPGKHFQEI 9 81 551.7873955743806 1101.5602382155612 2 551.7872802615166 MULTI CID FTMS 0 0 0 10319 1743889.25 0.1323447661985786 -4 0.4710578918457031 3 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 29.43715596616401 0.1566398223704148 3 QE{M(Oxidation (M))|F}{I|L} 4 7 31.67 0.0 0.0 2.875 0.0 0.0 566.2980824201187 0.0 566.2980824201187 0.0 7.206225184280797 0.0 0.0 0 0.25 0.0 0.0 0.3252574989159953 QE{M(Oxidation (M))|F}{I|L} 2.875 - 154 1 1.614 37368.2 1.0 5013 5307 10319 HBL1_DMSO_200M_050219_1,10322 HBL1_DMSO_200M_050219_1,10322,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10323 54.002 37.0 1429000.0 25 0 203390.0 + 22371 LPSQVSRVV 9 73 492.7955943294305 983.576635725661 2 492.7956420779228 MULTI CID FTMS 0 0 0 10319 1234091.875 0.6576279967739194 1 -0.1475448608398437 4 Unmodified _LPSQVSRVV_ ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2 15.248480904072842 0.4239247793462406 3 {I|L}PSQV 5 4 58.003 0.0 0.0 5.8972 0.0 0.0 0.0 456.2584627740844 456.2584627740844 38.293490024173806 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 + {I|L}PSQV 5.8972 + + 93 + 1 1.614 46425.4 1.0 5014 5307 10319 HBL1_DMSO_200M_050219_1,10323 HBL1_DMSO_200M_050219_1,10323,LPSQVSRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10324 54.005 151.0 915040.0 25 0 95509.0 + 14514 IGQIKRIL 8 97 470.8190080254972 939.6234631177944 2 470.8189269900322 MULTI CID FTMS 0 0 0 10319 622725.375 0.1243864946579605 -4 0.4710578918457031 5 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 50.855029805455786 0.1352255786796883 3 K{I|L}KR{I|L}{I|L} 6 -1 47.01 0.0 0.0 5.003 0.0 0.0 170.06845571940488 0.0 170.06845571940488 0.0 31.91097690408581 0.0 0.0 0 1.7302046884880935 0.0 0.0 0.7134679910804405 K{I|L}KR{I|L}{I|L} 5.003 - 200 + 1 1.614 107995.0 1.0 5015 5307 10319 HBL1_DMSO_200M_050219_1,10324 HBL1_DMSO_200M_050219_1,10324,IGQIKRIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10325 54.009 207.0 258410.0 25 0 13051.0 + -1 IQESMRECL 9 82 562.756825197896 1123.499097462592 2 562.7562744021416 MULTI CID FTMS 0 0 0 10319 576082.375 1.0 0 0.0 6 Oxidation (M) _IQESM(Oxidation (M))RECL_ REV__ENSG00000103047|ENST00000261778|TANGO6 2.9952420565917617 0.8101217823238775 3 M 1 -1 12.218 0.0 0.0 1.0875 0.0 0.0 974.4476275913012 0.0 974.4476275913012 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.0875 + + 18 + 1 1.614 44795.3 1.0 5016 5307 10319 HBL1_DMSO_200M_050219_1,10325 HBL1_DMSO_200M_050219_1,10325,IQESMRECL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10326 54.012 162.0 809740.0 25 0 56473.0 + 41595 VPPLATNTV 9 150 456.263596554667 910.512640176134 2 456.2637206912041 MULTI CID FTMS 0 0 0 10319 368071.90625 0.0367594254275993 -10 1.1176719665527344 7 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 67.34385681178166 0.0221257235307089 3 [VP]PA{I|L}TNTV 9 2 + 59.605 0.0 0.0 6.5464 6.5464 60.766 0.0 0.0 0.0 0.4033322926778879 16.478174818886373 0.4033322926778879 0.0 0 0.7742275032520141 2.0 0.8252574989159953 0.0 [VP]PA{I|L}TNTV;[VP]P{I|L}ATNTV;[{I|L}P]PATVNTV;[{I|L}P]PAVTNTV;[{I|L}P]APTVNTV;[VP][VS]PVNTV;[{I|L}P]PATNVTV;[{I|L}P]APVTNTV;[{I|L}P]APTNVTV;[VP]P[VS]VNTV 6.5464;6.5464;6.5021;6.3222;6.3087;6.2428;6.1463;6.1288;5.9529;5.9257 -;+;-;-;-;-;-;-;-;- + 2140 1 1.614 105512.2 1.0 5017 5307 10319 HBL1_DMSO_200M_050219_1,10326 HBL1_DMSO_200M_050219_1,10326,VPPLATNTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10327 54.022 549.0 409950.0 25 0 37135.0 + -1 YPSGECAVII 10 185 554.7722690091526 1107.5299850851052 2 554.7722656130791 MULTI CID FTMS 0 0 0 10319 360475.40625 1.0 0 0.0 8 Carbamidomethyl (C) _YPSGEC(Carbamidomethyl (C))AVII_ REV__ENSG00000129538|ENST00000397967|RNASE1 32.30548876998284 0.2428506522065767 3 {I|L}{M(Oxidation (M))|F}SS 4 -1 44.73 0.0 0.0 4.0387 0.0 0.0 0.0 670.3278292291624 670.3278292291624 23.303206620479813 0.0 0.0 0.0 0 0.3054621874040891 0.7958800173440752 1.305462187404089 0.0 {I|L}{M(Oxidation (M))|F}SS 4.0387 - 918 + 1 1.614 167834.5 1.0 5018 5307 10319 HBL1_DMSO_200M_050219_1,10327 HBL1_DMSO_200M_050219_1,10327,YPSGECAVII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10328 54.032 583.0 506490.0 25 0 33441.0 + 32193 RVVDELDNQM 10 162 609.7926672903367 1217.5707816474733 2 609.7937499880791 MULTI CID FTMS 0 0 0 10319 335716.375 0.251592399349916 -2 0.2192459106445312 9 Unmodified _RVVDELDNQM_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 100.0907132914201 0.0086105052902417 3 [RV]VDE{I|L}DNQM 10 0 + 100.53 0.0 0.0 8.2567 8.2567 93.042 0.0 0.0 0.0 12.720506778090552 16.53212513775344 12.720506778090552 9.164539485499262 0 1.0994850021680094 0.9208187539523752 1.4476212463643423 1.1237125054200234 + + [RV]VDE{I|L}DNQM;[RV]VDE{I|L}DN[AG]M;[RV]VDE{I|L}DGGQM;GGD{I|L}[KQ]{I|L}DNQM;[RV]VDE{I|L}DGG[AG]M;[DN]{I|L}[KQ]{I|L}DNQM;GGD{I|L}[KQ]{I|L}DGGQM;GGD{I|L}[KQ]{I|L}DN[AG]M;GGEV[KQ]{I|L}DNQM;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}E{I|L}DNQM 8.2567;7.504;7.504;7.2119;6.7542;6.4979;6.4622;6.4622;6.3266;6.1259 +;-;-;-;-;-;-;-;-;- + 1613 1 1.614 215017.9 1.0 5019 5307 10319 HBL1_DMSO_200M_050219_1,10328 HBL1_DMSO_200M_050219_1,10328,RVVDELDNQM True True RVVDELDNQM 54.031935 609.793749988079 658012656.0 10319.0 nc|ENSG00000085231|Q9Y3D8-2|AK6;;ENSG00000085231|ENST00000380822|AK6 9.0481325785319 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10329 54.035 127.0 687470.0 25 0 58282.0 + 6145 DSYTPKVI 8 121 461.7478129961095 921.481073059019 2 461.7476379275322 MULTI CID FTMS 0 0 0 10319 313786.65625 0.3452298215941057 -4 0.4710578918457031 10 Unmodified _DSYTPKVI_ ENSG00000133872|ENST00000256255|SARAF;ENST00000517569.1_1_8:29931365-29940465:-|nuORF 28.486842064014134 0.4448922141344407 3 TPKV{I|L} 5 3 17.836 0.0 0.0 1.9356 0.0 0.0 365.1230507191539 0.0 365.1230507191539 0.0 5.617267620601734 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 + TPKV{I|L} 1.9356 + + 157 + 1 1.614 73780.0 1.0 5020 5307 10319 HBL1_DMSO_200M_050219_1,10329 HBL1_DMSO_200M_050219_1,10329,DSYTPKVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10330 54.045 595.0 266800.0 25 0 16255.0 + + 27850 MPLDKHMEM 9 180 565.3626739926551 0 565.7634155154228 PEAK CID FTMS 0 0 0 10319 125308.828125 0.2046580777848018 -3 0.423980712890625 11 Unmodified _PLRFKIRSI_ ENST00000478869.1_1_2:203760778-203765795:-|nuORF;ENSG00000138442|ENST00000261015|WDR12 8.593279151180031 0.3284076903191179 3 NWN 3 -1 9.4858 0.0 0.0 0.84041 0.0 0.0 215.30773216324133 496.21787439517817 711.5256065584196 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NWN 0.84041 - 960 + 1 1.614 120871.9 1.0 5021 5307 10319 HBL1_DMSO_200M_050219_1,10330 HBL1_DMSO_200M_050219_1,10330,PLRFKIRSI False False MPLDKHMEM 54.044942 565.763415515423 607470.5 10319.0 ENST00000478869.1_1_2:203760778-203765795:-|nuORF;;ENSG00000138442|ENST00000261015|WDR12 3.6435584227244058 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10331 54.058 692.0 142170.0 25 0 8415.3 3615 DADEQQGSSLP 11 146 573.7482787966728 0 573.7482787966728 PEAK CID FTMS 0 0 0 -1 0 12 Unmodified _DADEQQGSSLP_ ENSG00000140675|ENST00000330498|SLC5A2 5.731851221503515 0.47618401536486 3 HP 2 10 10.969 0.0 0.0 0.9576 0.0 0.0 276.976128096232 631.3692399614771 908.345368057709 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HP 0.9576 - 98 + 1 1.614 79361.9 1.0 5022 5307 10319 HBL1_DMSO_200M_050219_1,10331 HBL1_DMSO_200M_050219_1,10331,DADEQQGSSLP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10332 54.061 158.0 315610.0 25 0 50675.0 + 3076 VAFRGAGSI 9 89 439.2477994941206 876.4810460550412 2 439.2477599978447 MULTI CID FTMS 0 0 0 10319 216469.40625 0.4056231839385183 -2 0.2192459106445312 13 Unmodified _AVMLMISI_ ENST00000293618.12_1_12:50794651-50821555:+|nuORF 34.18733598223924 0.3315367612694167 3 VA{[CT]|[{M(Oxidation (M))|F}G]}[RK]S{I|L} 8 5 + 50.398 0.0 0.0 5.75 5.75 91.103 0.0 0.0 0.0 24.52561882712928 12.438871815334949 12.438871815334949 50.3976719887757 0 0.8494850021680094 2.0 0.2059771852360797 0.0 VA{[CT]|[{M(Oxidation (M))|F}G]}[RK]S{I|L} 5.75 - 44 + 1 1.614 45131.4 1.0 5023 5307 10319 HBL1_DMSO_200M_050219_1,10332 HBL1_DMSO_200M_050219_1,10332,AVMLMISI False False VAFRGAGSI 54.061277 439.247759997845 3603950.0 10319.0 ENST00000293618.12_1_12:50794651-50821555:+|nuORF 0.7358410358428955 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10333 54.072 634.0 41409.0 25 0 2078.8 -1 0 60 629.1217109526967 0 629.1219360232353 PEAK CID FTMS 0 0 0 10319 223326.828125 1.0 0 0.0 14 3 {I|L} 1 -1 5.4846 0.0 0.0 0.43659 0.0 0.0 144.69122356379336 995.43512903385 1140.1263525976433 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.43659 - 27 + 1 1.614 31341.5 1.0 5024 5307 10319 HBL1_DMSO_200M_050219_1,10333 HBL1_DMSO_200M_050219_1,10333, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10334 54.086 800.0 274040.0 25 0 41640.0 45309 YSFLKGMGLKV 11 140 414.9034433728866 1241.68850071886 3 414.9032165408134 MULTI CID FTMS 0 0 0 10319 133013.0 0.0855542570017385 -4 0.4710578918457031 15 Unmodified _YSFLKGMGLKV_ ENSG00000126838|ENST00000261336|PZP;nc|ENSG00000126838|P20742-2|PZP 9.243775137331635 0.8315352019864206 3 {I|L}YV 3 9 30.688 0.0 0.0 2.4714 0.0 0.0 848.4623058016907 0.0 848.4623058016907 0.0 20.41000098699497 0.0 0.0 0 0.75 0.0 0.0 0.0 {I|L}YV 2.4714 - 113 1 1.614 171561.8 0.8899999856948853 5025 5307 10319 HBL1_DMSO_200M_050219_1,10334 HBL1_DMSO_200M_050219_1,10334,YSFLKGMGLKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10335 54.093 292.0 351420.0 25 0 24630.0 + 41768 VPVEQAVSV 9 127 464.2622002768665 0 464.2368652224541 PEAK CID FTMS 0 0 0 10319 72494.53125 0.6279181704061632 -1 0.0965995788574218 16 Unmodified _VPVEQAVSV_ ENSG00000131899|ENST00000316843|LLGL1 24.020572477871973 0.1646235280836931 3 VPE 3 6 12.307 0.0 0.0 1.3283 0.0 0.0 303.1810645168204 295.1416109674438 598.3226754842642 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VPE 1.3283 - 138 + 1 1.614 84520.4 1.0 5026 5307 10319 HBL1_DMSO_200M_050219_1,10335 HBL1_DMSO_200M_050219_1,10335,VPVEQAVSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10336 54.106 766.0 399940.0 25 0 16717.0 + -1 YPNIQGQV 8 176 918.4197275791412 1834.824902225082 2 918.4241821169852 MULTI CID FTMS 0 0 0 10319 131010.2734375 0.1098567056284988 -6 0.7270317077636719 17 ENSG00000186104|ENST00000334636|CYP2R1 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQNPTY{I|L}{[QS]|[NT]} 16 -1 + 108.42 0.0 0.0 5.909 5.909 79.246 0.0 0.0 0.0 50.43641306680844 1.1789981024806195 1.1789981024806195 2.2499956972244632 0 2.8243923658886185 0.0 0.9559771852360796 1.7689301784845295 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQNPTY{I|L}{[QS]|[NT]};[NP]{I|L}YQGNYDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}QYGNYDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]Y{I|L}QGNYDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD{[HG]|PP}V{M(Oxidation (M))|F}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[RH]{M(Oxidation (M))|F}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGADQNPTY{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NADQNPTY{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[AG]NPTY{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQGGPTY{I|L}{[QS]|[NT]} 5.909;5.7864;5.6904;5.5264;5.502;5.4305;5.4178;5.4178;5.4178;5.4178 -;-;-;-;-;-;-;-;-;- 300944 + 1 1.614 196933.2 1.0 5027 5307 10319 HBL1_DMSO_200M_050219_1,10336 HBL1_DMSO_200M_050219_1,10336, False False YPNIQGQV 54.105968 918.424182116985 0.0 10319.0 ENSG00000186104|ENST00000334636|CYP2R1 1.6660269995530446 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10337 54.117 634.0 195080.0 25 0 14346.0 + 14256 IEEFILLSEL 10 74 603.3350082220244 0 603.5031005740166 PEAK CID FTMS 0 0 0 10319 53489.6640625 0.1824768395130167 -2 0.2192459106445312 18 Unmodified _IEEFILLSEL_ REV__ENST00000518738.1_1_8:104033398-104053069:+|nuORF 14.838274106304384 0.3381107837965078 3 {I|L}SE 3 -1 22.664 0.0 0.0 1.8814 0.0 0.0 620.33718800783 252.1358615276772 872.4730495355072 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8851518780601922 0.0 {I|L}SE 1.8814 + + 177 + 1 1.614 101385.2 1.0 5028 5307 10319 HBL1_DMSO_200M_050219_1,10337 HBL1_DMSO_200M_050219_1,10337,IEEFILLSEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10338 54.13 750.0 117060.0 25 0 9609.0 -1 WKCKWCVWCRH 11 100 853.3851196169853 0 853.3851196169853 PEAK CID FTMS 0 0 0 -1 0 19 3 Carbamidomethyl (C) _WKC(Carbamidomethyl (C))KWC(Carbamidomethyl (C))VWC(Carbamidomethyl (C))RH_ ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C 0.0 0.4761840153648598 3 {I|L}A[NP]TA 6 -1 21.502 0.0 0.0 1.2613 0.0 0.0 852.2802967517456 282.1458529108032 1134.4261496625488 0.0 0.0 0.0 0.0 0 0.0 0.0 1.110924374808178 0.3252574989159953 {I|L}A[NP]TA 1.2613 - 659 + 1 1.614 64993.8 1.0 5029 5307 10319 HBL1_DMSO_200M_050219_1,10338 HBL1_DMSO_200M_050219_1,10338,WKCKWCVWCRH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10340 54.134 2.0 21211000.0 25 0 2474900.0 11323 GEYLLFTMI 9 65 362.85756516731504 1085.5508661021452 3 362.8575012087822 MULTI CID FTMS 0 0 0 10339 9452284.0 0.4099389958669919 -1 0.1475448608398437 1 Unmodified _GEYLLFTMI_ ENSG00000080644|ENST00000326828|CHRNA3;ENSG00000101204|ENST00000370263|CHRNA4;ENSG00000120903|ENST00000407991|CHRNA2;ENSG00000147434|ENST00000276410|CHRNA6;nc|ENSG00000080644|P32297-1|CHRNA3;nc|ENSG00000080644|P32297-3|CHRNA3;nc|ENSG00000101204|P43681-2|CHRNA4;nc|ENSG00000120903|Q15822-2|CHRNA2;nc|ENSG00000147434|Q15825-2|CHRNA6 20.453626601364224 0.2830276176381075 3 {[DA]|[EG]}YS{M(Oxidation (M))|F} 5 5 45.956 0.0 0.0 4.2334 0.0 0.0 0.0 499.2995716699471 499.2995716699471 40.47106248532352 0.0 0.0 0.0 0 0.6747425010840047 1.6989700043360187 0.0 0.0 {[DA]|[EG]}YS{M(Oxidation (M))|F} 4.2334 - 33 + 1 1.614 40877.2 1.0 5030 5308 10339 HBL1_DMSO_200M_050219_1,10340 HBL1_DMSO_200M_050219_1,10340,GEYLLFTMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10341 54.135 4.7 7976400.0 25 0 1222700.0 -1 GSHVCVILAF 10 66 368.194404519104 1101.5613841575118 3 368.1942016482353 MULTI CID FTMS 0 0 0 10339 6599057.0 0.3737107120115781 -3 0.366790771484375 2 Carbamidomethyl (C) _GSHVC(Carbamidomethyl (C))VILAF_ ENSG00000176787|ENST00000321522|OR52E2 6.630372943996041 0.695967137280542 3 {M(Oxidation (M))|F} 1 -1 13.979 0.0 0.0 1.2691 0.0 0.0 936.482005961026 0.0 936.482005961026 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2691 + + 32 + 1 1.614 37202.4 1.0 5031 5308 10339 HBL1_DMSO_200M_050219_1,10341 HBL1_DMSO_200M_050219_1,10341,GSHVCVILAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10342 54.136 3.2 10849000.0 25 0 1587300.0 35464 STLPKSLSL 9 61 473.2845340313317 944.5545151294634 2 473.2845031619072 MULTI CID FTMS 0 0 0 10339 12890559.0 0.4314238807161017 -3 0.366790771484375 3 Unmodified _STLPKSLSL_ chr20:43713106-43715163|43|124.74|0.37|8.4|+|0|MYBL2,None|1;chr20:43713106-43715221|22|13.86|0.02|9.29|+|0|MYBL2,None|1;ENSG00000101057|ENST00000217026|MYBL2;nc|ENSG00000101057|P10244-2|MYBL2 29.081581746732265 0.1611639662936252 3 [YR]VKTVE 7 8 33.166 0.0 0.0 3.5113 0.0 0.0 0.0 66.03574548892811 66.03574548892811 19.289617068680016 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.4049471895720984 0.0 [YR]VKTVE 3.5113 - 66 + 1 1.614 32224.3 1.0 5032 5308 10339 HBL1_DMSO_200M_050219_1,10342 HBL1_DMSO_200M_050219_1,10342,STLPKSLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10343 54.138 11.0 3134900.0 25 0 439660.0 + 13039 HAVGDIPGV 9 59 432.7324479626828 863.4503429921656 2 432.7324706912041 MULTI CID FTMS 0 0 0 10339 3979181.75 0.1380378590823756 -3 0.366790771484375 4 Unmodified _HAVGDIPGV_ ENSG00000186468|ENST00000296674|RPS23;ENST00000429775.2_1_X:70182861-70183140:+|nuORF 24.67388899826682 0.2172451872415813 3 V[DG]{I|L}PR 6 4 19.772 0.0 0.0 2.2899 0.0 0.0 208.0964222638688 0.0 208.0964222638688 0.0 8.803043191763596 0.0 0.0 0 0.5858955865873612 0.0 0.4247425010840047 0.0 V[DG]{I|L}PR 2.2899 - 21 1 1.614 33913.9 1.0 5033 5308 10339 HBL1_DMSO_200M_050219_1,10343 HBL1_DMSO_200M_050219_1,10343,HAVGDIPGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10344 54.139 19.0 1671100.0 25 0 139810.0 + 34975 SQPEKVYTL 9 67 532.7853376037565 1063.5561222743129 2 532.7852661013603 MULTI CID FTMS 0 0 0 10339 2074799.875 0.4334306661824309 -3 0.366790771484375 5 Unmodified _SQLLSPFSSV_ nc|ENSG00000154473|O43684-2|BUB3;ENSG00000154473|ENST00000368865|BUB3 9.38312468134398 0.6832340498775793 3 [EP]KVYT[SG][{I|L}A] 10 9 + 24.882 0.0 0.0 2.3395 2.3395 79.312 0.0 0.0 0.0 7.001962355242949 13.099550968482044 7.001962355242949 11.480625354554377 0 0.0 0.0 0.4247425010840047 0.0 [EP]KVYT[SG][{I|L}A];{NN|[MP]|[D{I|L}]|[EV]}[KP]YT[SG][{I|L}A] 2.3395;1.2601 -;- 45 1 1.614 30381.6 1.0 5034 5308 10339 HBL1_DMSO_200M_050219_1,10344 HBL1_DMSO_200M_050219_1,10344,SQLLSPFSSV False False SQPEKVYTL 54.138826 532.78526610136 21382530.0 10339.0 nc|ENSG00000154473|O43684-2|BUB3;;ENSG00000154473|ENST00000368865|BUB3 2.09918757279714 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10345 54.14 29.0 1587400.0 25 0 118400.0 + 3618 DADPVHRII 9 67 345.8581905695411 1034.552742308823 3 345.8581420779228 MULTI CID FTMS 0 0 0 10339 1456366.625 0.3061142649594863 -3 0.366790771484375 6 Unmodified _DADPVHRII_ ENST00000313064.2_1_2:232378824-232378857:-|nuORF 18.1463463914782 0.3454829746528889 3 {[DA]|[EG]}DPVH 6 3 50.916 0.0 0.0 4.9216 0.0 0.0 0.0 397.2569674127563 397.2569674127563 35.76606256887672 0.0 0.0 0.0 0 0.25 2.0 0.0 0.0 + {[DA]|[EG]}DPVH 4.9216 + + 30 + 1 1.614 46439.2 1.0 5035 5308 10339 HBL1_DMSO_200M_050219_1,10345 HBL1_DMSO_200M_050219_1,10345,DADPVHRII False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10346 54.141 23.0 1762900.0 25 0 164040.0 + 21355 LPFLLWLL 8 69 507.8211747099394 1013.6277964866788 2 507.8210632205009 MULTI CID FTMS 0 0 0 10339 1342938.5 0.3893679982400804 -3 0.366790771484375 7 Unmodified _LPFLLWLL_ REV__ENSG00000173376|ENST00000379692|NDNF 24.20995872069341 0.5349487244130675 3 {I|L}P{M(Oxidation (M))|F} 3 -1 43.672 0.0 0.0 4.3085 0.0 0.0 0.0 653.3986910455686 653.3986910455686 19.23516269895728 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}P{M(Oxidation (M))|F} 4.3085 + + 123 + 1 1.614 39413.0 1.0 5036 5308 10339 HBL1_DMSO_200M_050219_1,10346 HBL1_DMSO_200M_050219_1,10346,LPFLLWLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10347 54.142 23.0 1559800.0 25 0 93910.0 + 3620 DADPVHRII 9 67 518.2832040322584 1034.5518551313166 2 518.2833129763603 MULTI CID FTMS 0 0 0 10339 1184026.25 0.2132000400461467 -3 0.366790771484375 8 Unmodified _DADPVHRII_ ENST00000313064.2_1_2:232378824-232378857:-|nuORF 29.081581746732265 0.1611639662936252 3 {[DA]|[EG]}DPVH 6 3 50.507 0.0 0.0 4.882 0.0 0.0 0.0 397.2582186334594 397.2582186334594 49.397737521010825 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}DPVH 4.882 + + 20 + 1 1.614 34188.8 1.0 5037 5308 10339 HBL1_DMSO_200M_050219_1,10347 HBL1_DMSO_200M_050219_1,10347,DADPVHRII False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10348 54.144 36.0 1218000.0 25 0 121320.0 + 4391 DAVQFANRV 9 67 510.2668851042345 1018.519217275269 2 510.2667724490166 MULTI CID FTMS 0 0 0 10339 1198067.125 0.2012521321997885 -3 0.366790771484375 9 Unmodified _DAVQFANRV_ ENSG00000138678|ENST00000264409|GPAT3;ENSG00000158669|ENST00000396987|GPAT4;ENST00000509044.1_1_4:84519769-84525917:+|nuORF;ENST00000518628.1_1_8:41476250-41476497:+|nuORF 30.63653989081413 0.1413794767160703 3 {[DA]|[EG]}VQ{M(Oxidation (M))|F}A 6 3 54.213 0.0 0.0 5.3228 0.0 0.0 0.0 384.1997164361938 384.1997164361938 39.776296993281406 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.3807196863200844 + {[DA]|[EG]}VQ{M(Oxidation (M))|F}A 5.3228 + + 54 + 1 1.614 39263.7 1.0 5038 5308 10339 HBL1_DMSO_200M_050219_1,10348 HBL1_DMSO_200M_050219_1,10348,DAVQFANRV False True DAVQFANRV 54.143541 510.266772449017 19001138.0 10339.0 ENST00000509044.1_1_4:84519769-84525917:+|nuORF;;ENSG00000158669|ENST00000396987|GPAT4;;ENSG00000138678|ENST00000264409|GPAT3;;ENST00000518628.1_1_8:41476250-41476497:+|nuORF 6.454183419545491 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10349 54.145 35.0 613500.0 25 0 58083.0 + 38136 TPMNPANTI 9 53 479.73664640544 957.45873987768 2 479.7365905642509 MULTI CID FTMS 0 0 0 10339 1102983.875 0.2332838223658371 -3 0.366790771484375 10 Unmodified _TPMNPANTI_ ENSG00000118985|ENST00000237853|ELL2 10.823927491677226 0.5436922275383211 3 T{I|L} 2 7 16.198 0.0 0.0 1.6918 0.0 0.0 725.315869859905 0.0 725.315869859905 0.0 5.36043214641512 0.0 0.0 0 0.0 0.0 0.0 0.0 + T{I|L} 1.6918 + + 38 + 1 1.614 23159.9 1.0 5039 5308 10339 HBL1_DMSO_200M_050219_1,10349 HBL1_DMSO_200M_050219_1,10349,TPMNPANTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10350 54.147 117.0 804030.0 25 0 62033.0 + 4968 DGPSAGVTI 9 76 816.410121567438 815.4028451008379 1 816.4102050662041 MULTI CID FTMS 0 0 0 10339 833913.4375 0.6376889081846767 -1 0.1475448608398437 11 Unmodified _DGPSAGVTI_ ENSG00000102910|ENST00000285737|LONP2;ENST00000564259.1_1_16:48382051-48395504:+|nuORF;nc|ENSG00000102910|Q86WA8-2|LONP2 68.08070601005525 0.0218408846571049 3 [PS]GADGVT{I|L} 9 4 + 77.418 0.0 0.0 9.4944 9.4944 86.077 0.0 0.0 0.0 18.22582139723945 16.478174818886373 16.478174818886373 1.949237304209888 0 0.5 1.154901959985743 2.8807196863200843 0.0 [PS]GADGVT{I|L};[PS]QDGVT{I|L};[PS]GDAGVT{I|L};[PS]AGDGVT{I|L};[PS]GDQVT{I|L};[PS]GAVGDT{I|L};[PS]GADGTV{I|L};[PS]GADKE{I|L};[PS]QVGDT{I|L};[PS]QDGTV{I|L} 9.4944;9.2554;8.9633;8.9423;8.1407;7.6353;7.5264;7.4319;7.3963;7.2873 -;-;-;-;-;-;-;-;-;- 1414 1 1.614 68877.0 1.0 5040 5308 10339 HBL1_DMSO_200M_050219_1,10350 HBL1_DMSO_200M_050219_1,10350,DGPSAGVTI True True DGPSAGVTI 54.147182 816.410205066204 5507226.5 10339.0 ENSG00000102910|ENST00000285737|LONP2;;ENST00000564259.1_1_16:48382051-48395504:+|nuORF;;nc|ENSG00000102910|Q86WA8-2|LONP2 5.698472658793132 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10351 54.149 57.0 532550.0 25 0 38264.0 + 39522 VAVFSQSSETT 11 62 578.2813924311727 1154.5482319291452 2 578.2817870974541 MULTI CID FTMS 0 0 0 10339 829316.375 0.4193019566701216 -3 0.366790771484375 12 Unmodified _VAVFSQSSETT_ REV__ENSG00000198961|ENST00000361189|PJA2;REV__nc|ENSG00000198961|O43164-2|PJA2 5.731851221503515 0.8481046878870278 3 {[VA]|[{I|L}G]}V{[QS]|[NT]}HP[PA]{[{M(Oxidation (M))|F}C]|[YS]} 11 -1 + 35.73 0.0 0.0 3.0947 3.0947 82.862 0.0 0.0 0.0 25.439554284262627 8.282735463467688 8.282735463467688 35.73001041243462 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}V{[QS]|[NT]}HP[PA]{[{M(Oxidation (M))|F}C]|[YS]} 3.0947 - 90 1 1.614 29557.3 1.0 5041 5308 10339 HBL1_DMSO_200M_050219_1,10351 HBL1_DMSO_200M_050219_1,10351,VAVFSQSSETT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10352 54.15 78.0 1089100.0 25 0 112570.0 + 5638 DPEAGGIGRVV 11 100 535.2859739485405 1068.5573949638808 2 535.2863647341728 MULTI CID FTMS 0 0 0 10339 751112.6875 0.3874547897521976 -3 0.366790771484375 13 Unmodified _DPEAGGIGRVV_ ENSG00000139990|ENST00000341516|DCAF5;nc|ENSG00000139990|Q96JK2-2|DCAF5;nc|ENSG00000139990|Q96JK2-3|DCAF5 71.70789743142352 0.0274550572689813 3 DPEAGG{I|L} 7 4 96.274 0.0 0.0 9.0097 0.0 0.0 0.0 426.2474233070167 426.2474233070167 78.99366063840759 0.0 0.0 0.0 0 2.1549471895720984 2.0 0.4247425010840047 0.0 + DPEAGG{I|L} 9.0097 + + 205 + 1 1.614 73888.4 1.0 5042 5308 10339 HBL1_DMSO_200M_050219_1,10352 HBL1_DMSO_200M_050219_1,10352,DPEAGGIGRVV True True DPEAGGIGRVV 54.150432 535.286364734173 15919408.0 10339.0 ENSG00000139990|ENST00000341516|DCAF5;;nc|ENSG00000139990|Q96JK2-3|DCAF5;;nc|ENSG00000139990|Q96JK2-2|DCAF5 4.258905092875163 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10353 54.152 37.0 2123700.0 25 0 172960.0 + 34598 SPIENIQRV 9 93 528.2971967745343 1054.5798406158683 2 528.2983276247978 MULTI CID FTMS 0 0 0 10339 746799.0 0.2930885770948497 -3 0.366790771484375 14 Unmodified _SPIENIQRV_ ENSG00000168036|ENST00000349496|CTNNB1;ENST00000465552.1_1_3:41275683-41277995:+|nuORF;ENST00000485265.1_1_3:41277322-41278230:+|nuORF 89.40071534611396 0.0152361884002446 3 SP{I|L}EN{I|L}Q[RV] 9 0 + 90.771 0.0 0.0 8.6074 8.6074 93.993 0.0 0.0 0.0 68.09537690725298 4.762036441594191 4.762036441594191 9.208187539523747 0 1.5629529932484498 2.0 0.3807196863200844 0.3252574989159953 + + SP{I|L}EN{I|L}Q[RV];SP{I|L}EN{I|L}[RN]{I|L};SP{I|L}EN{I|L}[AG][RV];SP{I|L}EGG{I|L}Q[RV];SP{I|L}EGG{I|L}[AG][RV];SP{I|L}EGG{I|L}[RN]{I|L};SP{I|L}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q[RV];SP{I|L}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG][RV];SP{I|L}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RN]{I|L};SPV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q[RV] 8.6074;7.7342;7.7342;7.7342;6.8652;6.861;6.4382;5.5651;5.5651;5.3774 +;-;-;-;-;-;-;-;-;- + 648 + 1 1.614 70548.3 1.0 5043 5308 10339 HBL1_DMSO_200M_050219_1,10353 HBL1_DMSO_200M_050219_1,10353,SPIENIQRV True True SPIENIQRV 54.151611 528.298327624798 9970338.0 10339.0 ENSG00000168036|ENST00000349496|CTNNB1;;ENST00000485265.1_1_3:41277322-41278230:+|nuORF;;ENST00000465552.1_1_3:41275683-41277995:+|nuORF 5.31399408976237 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10354 54.154 98.0 502480.0 25 0 45504.0 + 25633 NFQQSVQEY 9 82 571.759002408523 1141.503451883846 2 571.7605468630791 MULTI CID FTMS 0 0 0 10339 523427.09375 0.150205472616971 -3 0.366790771484375 15 Unmodified _NFQQSVQEY_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 74.92900055777586 0.0191935851694334 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPSV 6 7 34.135 0.0 0.0 2.9903 0.0 0.0 0.0 435.1529629524584 435.1529629524584 10.551303186493683 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.75 1.5044321917401078 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPSV 2.9903 - 281 1 1.614 45505.4 1.0 5044 5308 10339 HBL1_DMSO_200M_050219_1,10354 HBL1_DMSO_200M_050219_1,10354,NFQQSVQEY True True NFQQSVQEY 54.153745 571.760546863079 12162117.0 10339.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-3|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;nc|ENSG00000006744|Q9BQ52-2|ELAC2 7.316159884134929 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10355 54.155 64.0 806850.0 25 0 65415.0 + 21855 LPPEKYMRV 9 72 378.21111069880914 1131.6115026966274 3 378.2110473513603 MULTI CID FTMS 0 0 0 10339 499864.96875 0.3722136471023624 -3 0.366790771484375 16 Unmodified _LPPEKYMRV_ ENSG00000139618|ENST00000380152|BRCA2 21.53697664764585 0.2571576504437394 3 {I|L}PPEKV 6 3 67.652 0.0 0.0 5.9783 0.0 0.0 0.0 465.1946200006469 465.1946200006469 60.66183773464459 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}PPEKV 5.9783 - 156 + 1 1.614 54272.5 1.0 5045 5308 10339 HBL1_DMSO_200M_050219_1,10355 HBL1_DMSO_200M_050219_1,10355,LPPEKYMRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10356 54.156 41.0 3050400.0 25 0 445640.0 + 284 ADPATALLE 9 125 450.7368226465683 899.4590923599367 2 450.7362548708916 MULTI CID FTMS 0 0 0 10339 520065.5 0.2085127854360936 2 -0.0774116516113281 17 Unmodified _ADPATALLE_ REV__ENSG00000140691|ENST00000268314|ARMC5;REV__nc|ENSG00000140691|Q96C12-2|ARMC5;REV__nc|ENSG00000140691|Q96C12-3|ARMC5;REV__nc|ENSG00000140691|Q96C12-4|ARMC5 26.88365393820708 0.1891292719743517 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}ATE 6 -1 25.244 0.0 0.0 2.8066 0.0 0.0 0.0 222.08901392154533 222.08901392154533 8.008658832790168 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.1421590589602533 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}ATE 2.8066 - 602 + 1 1.614 96669.6 1.0 5046 5308 10339 HBL1_DMSO_200M_050219_1,10356 HBL1_DMSO_200M_050219_1,10356,ADPATALLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10357 54.164 418.0 522350.0 25 0 35076.0 -1 FDCRLHTHMYF 11 141 743.3233557763281 1484.632158619456 2 743.3239013552666 MULTI CID FTMS 0 0 0 10339 414442.90625 0.5335437844166856 -1 0.1475448608398437 18 Oxidation (M) _FDCRLHTHM(Oxidation (M))YF_ OR4D1|p.P58H|1|0.49|ENSG00000141194|chr17:58155326-58155326|C/A|missense_variant 5.731851221503515 0.8481046878870278 3 SGHDEAQQNA{M(Oxidation (M))|F}Y 12 -1 84.621 0.0 0.0 5.6998 0.0 0.0 119.07398421455234 0.0 119.07398421455234 0.0 61.33500092441244 0.0 0.0 0 1.1989700043360187 0.0 0.3252574989159953 0.805462187404089 SGHDEAQQNA{M(Oxidation (M))|F}Y 5.6998 - 9625 1 1.614 151863.7 1.0 5047 5308 10339 HBL1_DMSO_200M_050219_1,10357 HBL1_DMSO_200M_050219_1,10357,FDCRLHTHMYF False False False False variant PXD020620_cell_line HBL1_DMSO_200M_050219_1 10358 54.173 482.0 356780.0 25 0 84447.0 + 22273 LPRRPNDIYV 10 114 621.8517854627297 1241.689017992259 2 621.8516113162041 MULTI CID FTMS 0 0 0 10339 258209.28125 0.229095229476274 -3 0.366790771484375 19 Unmodified _LPRRPNDIYV_ ENSG00000172336|ENST00000303151|POP7 37.77132515983256 0.1811013699114492 3 [{I|L}P]RRYY{I|L}YV 9 3 + 47.555 0.0 0.0 3.8299 3.8299 80.803 0.0 0.0 0.0 13.696662315049934 17.10969151716678 13.696662315049934 9.208187539523747 0 0.7215141619232908 1.0 0.0 0.9247425010840048 [{I|L}P]RRYY{I|L}YV;[{I|L}P]R[VG]YY{I|L}YV 3.8299;3.0883 -;- 204 1 1.614 127462.2 1.0 5048 5308 10339 HBL1_DMSO_200M_050219_1,10358 HBL1_DMSO_200M_050219_1,10358,LPRRPNDIYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10360 54.177 0.33 80254000.0 25 0 10280000.0 + 4577 DAYSFSRKI 9 53 543.7826873787078 1085.5508218242155 2 543.7838012576103 MULTI CID FTMS 0 0 0 10359 125418144.0 1.0 0 0.0 1 Unmodified _DAYSFSRKI_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000538600.1_1_12:6631091-6632090:+|nuORF 11.494710602746466 0.5255349189887087 3 {[DA]|[EG]}YS{M(Oxidation (M))|F} 5 4 41.95 0.0 0.0 3.8644 0.0 0.0 0.0 499.3019198053344 499.3019198053344 41.95046257204389 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YS{M(Oxidation (M))|F} 3.8644 + + 8 + 1 1.604 25694.5 1.0 5049 5309 10359 HBL1_DMSO_200M_050219_1,10360 HBL1_DMSO_200M_050219_1,10360,DAYSFSRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10361 54.178 1.3 27641000.0 25 0 5495200.0 + 15394 IPPDQQRLI 9 46 540.3145428572215 1078.6145327812428 2 540.3148681521416 MULTI CID FTMS 0 0 0 10359 36576672.0 0.7022847952144747 -2 0.1899642944335937 2 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 13.042465956692816 0.4836390050082244 3 {I|L}PPD 4 5 56.186 0.0 0.0 5.2091 0.0 0.0 0.0 653.3754486940194 653.3754486940194 48.73835032203424 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPD 5.2091 + + 11 + 1 1.604 36908.0 1.0 5050 5309 10359 HBL1_DMSO_200M_050219_1,10361 HBL1_DMSO_200M_050219_1,10361,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10362 54.179 6.8 6209700.0 25 0 1098900.0 + 37053 TGFSPRQI 8 61 453.2454977186477 904.4764425040954 2 453.2456542849541 MULTI CID FTMS 0 0 0 10359 6686138.5 0.1783446803652602 3 -0.1889533996582031 3 Unmodified _TGFSPRQI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 30.63653989081413 0.3996269429323407 3 TG{M(Oxidation (M))|F}S 4 4 54.412 0.0 0.0 6.0159 0.0 0.0 0.0 509.2847336952837 509.2847336952837 40.43305028184122 0.0 0.0 0.0 0 0.8494850021680094 1.3979400086720375 0.0 0.0 + TG{M(Oxidation (M))|F}S 6.0159 + + 48 + 1 1.604 39932.5 1.0 5051 5309 10359 HBL1_DMSO_200M_050219_1,10362 HBL1_DMSO_200M_050219_1,10362,TGFSPRQI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10363 54.18 7.1 5397800.0 25 0 913220.0 17311 KLSMLVPVK 9 67 338.88333375638865 1013.628171869366 3 338.8831359744072 MULTI CID FTMS 0 0 0 10359 5388879.5 0.6838026571701116 -2 0.1899642944335937 4 Unmodified _KLSMLVPVK_ ENST00000504986.5_1_4:41962243-41962348:+|nuORF 13.042465956692816 0.4836390050082244 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SKVK 6 5 33.109 0.0 0.0 3.2664 0.0 0.0 0.0 324.1929051059472 324.1929051059472 0.791812460476244 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SKVK 3.2664 - 136 1 1.604 42513.1 1.0 5052 5309 10359 HBL1_DMSO_200M_050219_1,10363 HBL1_DMSO_200M_050219_1,10363,KLSMLVPVK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10364 54.181 20.0 1482800.0 25 0 126600.0 + 21895 LPPEYASTV 9 61 488.7531214727471 975.4916900122944 2 488.7533141970634 MULTI CID FTMS 0 0 0 10359 2825081.5 0.6258161542524753 11 -0.912921905517578 5 Unmodified _LPPEYASTV_ ENSG00000178913|ENST00000313368|TAF7 23.1484247019978 0.2366544122328345 3 [EP]YAP{I|L}{[WT]|[RM]} 8 5 + 29.385 0.0 0.0 3.0124 3.0124 75.547 0.0 0.0 0.0 3.979400086720375 10.132965752203232 3.979400086720375 6.020599913279625 0 0.0 0.0 0.0 0.0 [EP]YAP{I|L}{[WT]|[RM]};[EP]YPA{I|L}{[WT]|[RM]};[EP]PYA{I|L}{[WT]|[RM]};[EP]YP{I|L}A{[WT]|[RM]};[EP]PY{I|L}A{[WT]|[RM]} 3.0124;2.3952;2.3952;2.0866;2.0866 -;-;-;-;- 114 1 1.604 29221.3 1.0 5053 5309 10359 HBL1_DMSO_200M_050219_1,10364 HBL1_DMSO_200M_050219_1,10364,LPPEYASTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10365 54.182 15.0 1816100.0 25 0 246900.0 + 22018 IPPPPPPAM 9 57 458.7515933437354 915.4886337542708 2 458.7519714236259 MULTI CID FTMS 0 0 0 10359 2745107.0 0.3922306775160064 15 -1.2562484741210938 6 Unmodified _LPPPPPPAM_ ENST00000468653.5_1_3:160117521-160130242:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4 56.04830969593885 0.0282699710924866 3 [{I|L}P]{[HG]|PP}PP[PA]M 9 0 + 50.837 0.0 0.0 5.553 5.553 84.981 0.0 0.0 0.0 33.84697482522071 11.962724883926654 11.962724883926654 8.46787486224656 0 1.8494850021680087 1.6989700043360187 0.0 0.0 + + [{I|L}P]{[HG]|PP}PP[PA]M;[{I|L}P][YK]P[PA]M 5.553;4.628 +;- + 81 + 1 1.604 29126.5 1.0 5054 5309 10359 HBL1_DMSO_200M_050219_1,10365 HBL1_DMSO_200M_050219_1,10365,LPPPPPPAM True True IPPPPPPAM 54.182426 458.751971423626 746744264.0 10359.0 ENST00000468653.5_1_3:160117521-160130242:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 6.099896430969238 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10366 54.184 24.0 1593800.0 25 0 433670.0 -1 0 54 351.72933715742903 701.4441213816581 2 351.7289916872978 MULTI CID FTMS 0 0 0 10359 2471102.25 0.9401185257413376 2 -0.0879440307617187 7 3 {[TV]|[{I|L}S]}{I|L} 3 -1 34.705 0.0 0.0 4.9476 0.0 0.0 0.0 385.2211504633373 385.2211504633373 27.715299873086607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L} 4.9476 - 15 + 1 1.604 35238.7 1.0 5055 5309 10359 HBL1_DMSO_200M_050219_1,10366 HBL1_DMSO_200M_050219_1,10366, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10367 54.185 20.0 1774600.0 25 0 347680.0 + 13438 HLPSDFTPA 9 63 492.74319510731857 983.4718372814372 2 492.7434265017509 MULTI CID FTMS 0 0 0 10359 1901013.5 0.7611318242130289 3 -0.1889533996582031 8 Unmodified _HLPSDFTPA_ CON__P01966 8.593279151180031 0.6146971463335029 3 PSQ 3 7 13.188 0.0 0.0 1.3409 0.0 0.0 112.97578682715556 555.3250216119749 668.3008084391305 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PSQ 1.3409 - 39 + 1 1.604 35772.3 1.0 5056 5309 10359 HBL1_DMSO_200M_050219_1,10367 HBL1_DMSO_200M_050219_1,10367,HLPSDFTPA False True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 10368 54.186 53.0 647140.0 25 0 51991.0 -1 PLAPMEPLL 9 64 498.7775365986361 995.5405202640724 2 498.7771179080009 MULTI CID FTMS 0 0 0 10359 879585.6875 0.1887579035342574 4 -0.2679443359375 9 Oxidation (M) _PLAPM(Oxidation (M))EPLL_ ENSG00000137877|ENST00000320955|SPTBN5 30.22481116460888 0.1466181017706357 3 [{I|L}P][HA][MT]T{I|L}{I|L} 9 -1 + 44.727 0.0 0.0 4.4928 4.4928 86.254 0.0 0.0 0.0 3.18513709057612 37.73773107713893 3.18513709057612 30.457574905606748 0 0.7614393726401688 2.0 0.0 0.0 [{I|L}P][HA][MT]T{I|L}{I|L};KK{[YC]|[HE]}[DN]{I|L}{I|L};KK{[YC]|[HE]}[WR]{I|L} 4.4928;1.4334;0.4071 -;-;- 94 1 1.604 32683.9 1.0 5057 5309 10359 HBL1_DMSO_200M_050219_1,10368 HBL1_DMSO_200M_050219_1,10368,PLAPMEPLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10369 54.188 52.0 1241500.0 25 0 75977.0 + 24637 MLPPQTKGV 9 102 485.7714425208201 0 485.7719909548759 PEAK CID FTMS 0 0 0 10359 585529.25 0.8291188857085559 -2 0.1899642944335937 10 Unmodified _MLPPQTKGV_ REV__ENSG00000131966|ENST00000254286|ACTR10 15.847184025352805 0.2451986057151378 3 PP 2 -1 14.464 0.0 0.0 1.4919 0.0 0.0 147.06823806936185 625.3338106744749 772.4020487438368 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 PP 1.4919 + + 28 + 1 1.604 53458.0 1.0 5058 5309 10359 HBL1_DMSO_200M_050219_1,10369 HBL1_DMSO_200M_050219_1,10369,MLPPQTKGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10370 54.189 38.0 724160.0 25 0 89364.0 26995 PEKDHVYL 8 62 500.7577654540396 999.5009779748792 2 500.7575256228447 MULTI CID FTMS 0 0 0 10359 566297.0625 0.8414736043030833 -2 0.1899642944335937 11 Unmodified _PEKDHVYL_ ENSG00000073578|ENST00000264932|SDHA;ENST00000427841.5_1_3:195698311-195709045:-|nuORF;ENST00000429897.5_1_3:195393072-195404601:+|nuORF;ENST00000504824.5_1_5:218488-235547:+|nuORF;ENST00000505555.5_1_5:218470-251793:+|nuORF;ENST00000511810.5_1_5:235190-235547:+|nuORF;nc|ENSG00000073578|P31040-2|SDHA;nc|ENSG00000073578|P31040-3|SDHA 4.3292370932331545 0.7980541185046766 3 [Y{I|L}][NS]{NN|[MP]|[D{I|L}]|[EV]}Y{I|L} 8 5 + 30.123 0.0 0.0 3.0138 3.0138 81.805 0.0 0.0 0.0 23.133637307377057 14.024174299985006 14.024174299985006 20.0 0 0.0 2.0 0.0 0.0 [Y{I|L}][NS]{NN|[MP]|[D{I|L}]|[EV]}Y{I|L};[Y{I|L}][HQ][HV]{[CT]|[{M(Oxidation (M))|F}G]} 3.0138;1.0128 -;- 52 + 1 1.604 28849.4 1.0 5059 5309 10359 HBL1_DMSO_200M_050219_1,10370 HBL1_DMSO_200M_050219_1,10370,PEKDHVYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10371 54.194 288.0 452520.0 25 0 85067.0 + 45744 YYIPGQGRSTY 11 71 652.8170727474314 1303.6195925616628 2 652.8172485232353 MULTI CID FTMS 0 0 0 10359 423946.15625 0.197610108504758 -2 0.1899642944335937 12 Unmodified _YYIPGQGRSTY_ ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 27.22323531849824 0.4529927607131788 3 YY{I|L}PGQS[WK]Y 10 4 + 77.184 0.0 0.0 5.9208 5.9208 87.047 0.0 0.0 0.0 64.08539067949008 5.484550065040281 5.484550065040281 9.164539485499262 0 0.8494850021680094 2.0 0.3807196863200844 0.4247425010840047 YY{I|L}PGQS[WK]Y;YY{I|L}PG[AG]S[WK]Y;YY{I|L}PG{[MG]|[TS]}KY{[NV]|[RG]};YY{I|L}PG{[MG]|[TS]}K{[NV]|[RG]}Y;YY{I|L}P[MN]KY{[NV]|[RG]};YY{I|L}P[MN]K{[NV]|[RG]}Y;YY{I|L}Y[YV][HA]{[NV]|[RG]} 5.9208;5.2178;4.9477;4.7559;4.1512;3.9595;2.4829 -;-;-;-;-;-;- 328 + 1 1.604 101268.2 1.0 5060 5309 10359 HBL1_DMSO_200M_050219_1,10371 HBL1_DMSO_200M_050219_1,10371,YYIPGQGRSTY False True YYIPGQGRSTY 54.193997 652.817248523235 21259682.0 10359.0 ENSG00000114867|ENST00000346169|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1 6.397956689198812 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10372 54.196 98.0 439370.0 25 0 89635.0 + 9094 FFIETGRPK 9 59 365.5382677817877 1093.5929739455632 3 365.8726379275322 MULTI CID FTMS 0 0 0 10359 427690.03125 1.0 0 0.0 13 Unmodified _FFIETGRPK_ ENST00000412272.6_1_10:69832876-69833427:-|nuORF 6.630372943996041 0.683221206560437 3 ET 2 7 15.217 0.0 0.0 1.3914 0.0 0.0 407.2202755002437 453.2590426080688 860.4793181083124 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 + ET 1.3914 + + 33 + 1 1.604 38917.7 1.0 5061 5309 10359 HBL1_DMSO_200M_050219_1,10372 HBL1_DMSO_200M_050219_1,10372,FFIETGRPK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10373 54.202 309.0 476150.0 25 0 37086.0 -1 SQRAFCTMHFY 11 127 732.3129326918261 1462.611312450452 2 732.3129760622978 MULTI CID FTMS 0 0 0 10359 387505.8125 0.0782955333219781 -4 0.409210205078125 14 Carbamidomethyl (C),Oxidation (M) _SQRAFC(Carbamidomethyl (C))TM(Oxidation (M))HFY_ ENST00000277415.15_1_9:137989658-137989826:+|nuORF 8.155526934196011 0.8366696279279818 3 [AG]NAG[HD]AQQNA{M(Oxidation (M))|F}Y 14 -1 + 80.5 0.0 0.0 5.5038 5.5038 78.052 0.0 0.0 0.0 6.795414524976948 10.7521226932964 6.795414524976948 2.39375624718825 0 0.8182503180159344 1.3979400086720375 0.6694451763165201 1.9696100389531248 [AG]NAG[HD]AQQNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]QGG[HD]AQQNA{M(Oxidation (M))|F}Y;[AG]NQ[HD]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG[HD]AQQNA{M(Oxidation (M))|F}Y;[AG]GQG[HD]AQQNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]ANG[HD]AQQNA{M(Oxidation (M))|F}Y;[AG]NAG[HD]A[AG]QNA{M(Oxidation (M))|F}Y;[AG]NAG[HD]AQ[AG]NA{M(Oxidation (M))|F}Y 5.5038;5.3402;5.2104;5.0564;5.0392;5.0317;4.9977;4.9721;4.8851;4.8851 -;-;-;-;-;-;-;-;-;- 6141 1 1.604 108274.6 1.0 5062 5309 10359 HBL1_DMSO_200M_050219_1,10373 HBL1_DMSO_200M_050219_1,10373,SQRAFCTMHFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10374 54.207 307.0 167560.0 25 0 21562.0 -1 0 68 611.971931378588 1832.893964735964 3 612.3061401247978 MULTI CID FTMS 0 0 0 10359 359309.65625 1.0 0 0.0 15 3 Y 1 -1 6.9897 0.0 0.0 0.38135 0.0 0.0 1534.7615415886414 132.04586206607658 1666.807403654718 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.38135 - 36 + 1 1.604 45550.3 1.0 5063 5309 10359 HBL1_DMSO_200M_050219_1,10374 HBL1_DMSO_200M_050219_1,10374, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10376 54.216 395.0 402330.0 25 0 38983.0 + 24407 MFQNRVRPL 9 145 387.549506438511 1159.626689915733 3 387.8842346072197 MULTI CID FTMS 0 0 0 10375 125183.171875 0.0118010994668523 8 -0.6902580261230469 1 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 28.486842064014134 0.1687311288560894 3 M{M(Oxidation (M))|F}Q[RP]{I|L}V[RN] 9 4 + 29.186 0.0 0.0 2.5169 2.5169 78.504 0.0 0.0 0.0 17.766313544348996 2.9884092432910627 2.9884092432910627 9.208187539523752 0 0.0 0.0 0.0 0.7302046884880937 M{M(Oxidation (M))|F}Q[RP]{I|L}V[RN];M{M(Oxidation (M))|F}[AG][RP]{I|L}V[RN];M{M(Oxidation (M))|F}Q[RN][RV]P{I|L};M{M(Oxidation (M))|F}Q[RP]{I|L}[RN]V;M{I|L}[YE]RPAAP{I|L} 2.5169;1.7228;1.694;1.4785;0.7782 -;-;+;-;- + 300 + 1 1.604 131024.4 1.0 5064 5310 10375 HBL1_DMSO_200M_050219_1,10376 HBL1_DMSO_200M_050219_1,10376,MFQNRVRPL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10377 54.223 364.0 518510.0 25 0 24598.0 + 13952 HYNGTDVSF 9 181 520.2275145989254 1038.440476264651 2 520.2277709841728 MULTI CID FTMS 0 0 0 10375 260827.53125 0.3428439455753252 1 -0.0529518127441406 2 Unmodified _HYNGTDVSF_ ENSG00000176624|ENST00000406189|MEX3C 74.92900055777586 0.0191935851694334 3 {[WN]|[YH]}[NG]TDVS{M(Oxidation (M))|F} 9 0 + 43.509 0.0 0.0 4.1899 4.1899 71.713 0.0 0.0 0.0 9.277326374752157 32.79583286831858 9.277326374752157 1.2060316061202982 0 0.9247425010840048 1.2218487496163564 1.3001648626366045 0.3054621874040891 + + {[WN]|[YH]}[NG]TDVS{M(Oxidation (M))|F};{[WN]|[YH]}{[{M(Oxidation (M))|F}C]|[YS]}HVS{M(Oxidation (M))|F};[VP][C(Carbamidomethyl (C))D]TDVS{M(Oxidation (M))|F};[VP][C(Carbamidomethyl (C))C]{NN|[MP]|[D{I|L}]|[EV]}VS{M(Oxidation (M))|F};{[WN]|[YH]}[WH]YS{M(Oxidation (M))|F};{[WN]|[YH]}{[{M(Oxidation (M))|F}C]|[YS]}HW{M(Oxidation (M))|F};{[DA]|[EG]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{NN|[MP]|[D{I|L}]|[EV]}VS{M(Oxidation (M))|F};{[WN]|[YH]}{[DS]|[MA]|[CV]|TT}{[{M(Oxidation (M))|F}H]|[RQ]}S{M(Oxidation (M))|F};{[DA]|[EG]}G{NN|[MP]|[D{I|L}]|[EV]}TDVS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HM]{[{M(Oxidation (M))|F}H]|[RQ]}S{M(Oxidation (M))|F} 4.1899;4.0737;3.2719;3.1013;3.0805;2.961;2.6915;2.4982;2.3104;2.071 +;-;-;-;-;-;-;-;-;- + 489 1 1.604 144281.2 1.0 5065 5310 10375 HBL1_DMSO_200M_050219_1,10377 HBL1_DMSO_200M_050219_1,10377,HYNGTDVSF True True HYNGTDVSF 54.222915 520.2285 4400248.0 10375.0 ENSG00000176624|ENST00000406189|MEX3C 6.196565310160319 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10378 54.23 417.0 457860.0 25 0 44755.0 22677 LPYVHLPI 8 172 476.28487125370367 950.5551895742074 2 476.2863036990166 MULTI CID FTMS 0 0 0 10375 178176.5625 0.3015251488045502 -1 0.0349922180175781 3 Unmodified _LPYVHLPI_ ENSG00000070269|ENST00000261556|TMEM260;ENST00000557626.5_1_14:57046563-57082746:+|nuORF;ENST00000557657.5_1_14:57046563-57079004:+|nuORF;nc|ENSG00000070269|Q9NX78-2|TMEM260;nc|ENSG00000070269|Q9NX78-3|TMEM260 24.20995872069341 0.5349487244130675 3 {I|L}PPE 4 5 53.8 0.0 0.0 5.6599 0.0 0.0 0.0 511.3007639624905 511.3007639624905 42.69077524932108 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPE 5.6599 - 423 + 1 1.604 147067.9 1.0 5066 5310 10375 HBL1_DMSO_200M_050219_1,10378 HBL1_DMSO_200M_050219_1,10378,LPYVHLPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10379 54.237 397.0 190890.0 25 0 11538.0 33843 SLERILDIY 9 114 561.3123479258485 0 561.7673828005791 PEAK CID FTMS 0 0 0 10375 70954.6796875 0.3186573696445543 1 -0.0529518127441406 4 Unmodified _SLERILDIY_ ENSG00000021826|ENST00000233072|CPS1;nc|ENSG00000021826|P31327-2|CPS1;nc|ENSG00000021826|P31327-3|CPS1 4.3292370932331545 0.3444685223463734 3 D[YV]SNVC 7 9 7.1569 0.0 0.0 0.63866 0.0 0.0 112.17658042756462 225.08846460513908 337.2650450327037 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 D[YV]SNVC 0.63866 - 40 + 1 1.604 62184.2 1.0 5067 5310 10375 HBL1_DMSO_200M_050219_1,10379 HBL1_DMSO_200M_050219_1,10379,SLERILDIY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10380 54.245 410.0 198060.0 25 0 10373.0 45639 YVPAHALEHH 10 120 587.2940205359084 1172.5734881386168 2 587.2930786013603 MULTI CID FTMS 0 0 0 10375 172867.5 0.6500478156059138 -3 0.2249565124511718 5 Unmodified _YVPAHALEHH_ ENST00000436072.6_1_7:37955747-37956332:-|nuORF 14.838274106304384 0.5985701837916485 3 YPAVR 5 7 60.059 0.0 0.0 5.122 0.0 0.0 0.0 583.2108858697874 583.2108858697874 49.76862273419985 0.0 0.0 0.0 0 1.5356668758921828 1.6989700043360187 0.0 0.0 YPAVR 5.122 - 357 + 1 1.604 65298.0 1.0 5068 5310 10375 HBL1_DMSO_200M_050219_1,10380 HBL1_DMSO_200M_050219_1,10380,YVPAHALEHH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10381 54.253 455.0 182250.0 25 0 13321.0 11993 GPGGGLWH 8 117 780.377764408903 779.3704879423029 1 780.3778564333916 MULTI CID FTMS 0 0 0 10375 157305.90625 0.0829317657463282 -6 0.6489372253417969 6 Unmodified _GPGGGLWH_ ENST00000252288.7_2_19:1399870-1401344:-|nuORF 2.889219685676258 0.8067950007271085 3 [NP]{I|L}N[WH] 6 5 + 36.898 0.0 0.0 4.7343 4.7343 81.987 0.0 0.0 0.0 8.222192947339192 1.9627248839266545 1.9627248839266545 8.222192947339192 0 0.0 1.3979400086720375 0.0 0.3252574989159953 [NP]{I|L}N[WH];{[QV]|[N{I|L}]|[RA]|[KV]}PNE{[HG]|PP};[NP]{I|L}GG[WH];{I|L}NM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGGE{[HG]|PP} 4.7343;3.6793;3.5256;3.1868;2.4821 -;-;-;-;- 125 1 1.604 60420.2 1.0 5069 5310 10375 HBL1_DMSO_200M_050219_1,10381 HBL1_DMSO_200M_050219_1,10381,GPGGGLWH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10382 54.26 420.0 255590.0 25 0 12464.0 33597 SIPFSFMY 8 154 496.23443848003575 0 496.2335082888603 PEAK CID FTMS 0 0 0 10375 136213.28125 1.0 0 0.0 7 Unmodified _SIPFSFMY_ nc|ENSG00000176748|P0C646|OR52Z1P 14.581692164780916 0.4900557725783909 3 V 1 8 9.2917 0.0 0.0 0.93813 0.0 0.0 396.11534805206526 492.2455545970793 888.3609026491446 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 V 0.93813 - 184 + 1 1.604 83886.8 1.0 5070 5310 10375 HBL1_DMSO_200M_050219_1,10382 HBL1_DMSO_200M_050219_1,10382,SIPFSFMY False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10384 54.264 8.3 5996500.0 25 0 451820.0 + 39941 VGAAIKIIR 9 80 314.2151031998742 939.6234801998226 3 314.2149230837822 MULTI CID FTMS 0 0 0 10383 8395049.0 0.6414029245204959 2 -0.1800003051757812 1 Unmodified _VGAAIKIIR_ ENSG00000166848|ENST00000300086|TERF2IP 7.289230182591677 0.6602208344931196 3 K{I|L}K[R{I|L}]{I|L} 6 6 20.01 0.0 0.0 2.1295 0.0 0.0 170.06744882750394 0.0 170.06744882750394 0.0 13.02001655294582 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 K{I|L}K[R{I|L}]{I|L} 2.1295 - 25 + 1 1.579 47168.0 1.0 5071 5311 10383 HBL1_DMSO_200M_050219_1,10384 HBL1_DMSO_200M_050219_1,10384,VGAAIKIIR False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10385 54.266 9.1 3758500.0 25 0 439000.0 + 9927 FPGKHFQEI 9 64 551.7873955743806 1101.5602382155612 2 551.7875854372978 MULTI CID FTMS 0 0 0 10383 13176866.0 1.0 0 0.0 2 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 17.44264345198275 0.3645313841742926 3 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[YK]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 5 + 27.841 0.0 0.0 2.5274 2.5274 78.67 0.0 0.0 0.0 14.742143968049888 5.762743881329513 5.762743881329513 9.262137858390812 0 0.0 0.0 0.5 0.4247425010840047 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[YK]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[YK][AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.5274;1.6866 -;- 61 + 1 1.579 31148.4 1.0 5072 5311 10383 HBL1_DMSO_200M_050219_1,10385 HBL1_DMSO_200M_050219_1,10385,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10386 54.267 15.0 4083500.0 25 0 678100.0 + + 8886 AFPGGAKEL 9 75 445.2424455140612 888.4703380949225 2 445.2428771853447 MULTI CID FTMS 0 0 0 10383 5305275.5 1.0 0 0.0 3 Unmodified _FAELAPNK_ ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B 13.50788311687929 0.7113601687236069 3 EKY 3 -1 15.93 0.0 0.0 1.793 0.0 0.0 349.1990630773582 116.05124078922108 465.25030386657926 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 EKY 1.793 - 41 + 1 1.579 51769.7 1.0 5073 5311 10383 HBL1_DMSO_200M_050219_1,10386 HBL1_DMSO_200M_050219_1,10386,FAELAPNK False False AFPGGAKEL 54.266834 445.242877185345 190943504.0 10383.0 ENSG00000213676|ENST00000375203|ATF6B;;nc|ENSG00000213676|Q99941-2|ATF6B 4.238913138707479 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10387 54.268 29.0 1391600.0 25 0 128680.0 + 14515 IGQIKRIL 8 69 470.8190080254972 939.6234631177944 2 470.8192932009697 MULTI CID FTMS 0 0 0 10383 5006374.5 1.0 0 0.0 4 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 11.640296217721598 0.738950129755968 3 {I|L}{[QG]|[NA]}{I|L}K 5 -1 25.471 0.0 0.0 2.7108 0.0 0.0 0.0 397.25779138736567 397.25779138736567 15.717152598674424 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {I|L}{[QG]|[NA]}{I|L}K 2.7108 + + 29 + 1 1.579 38968.0 1.0 5074 5311 10383 HBL1_DMSO_200M_050219_1,10387 HBL1_DMSO_200M_050219_1,10387,IGQIKRIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10388 54.269 14.0 3472500.0 25 0 555340.0 + 25272 MVVQDGIVKA 10 73 530.2976971023932 1058.5808412715862 2 530.2984496951103 MULTI CID FTMS 0 0 0 10383 5039730.5 0.7118480592063261 -2 0.0879440307617187 5 Unmodified _MVVQDGIVKA_ ENSG00000126432|ENST00000265462|PRDX5;nc|ENSG00000126432|P30044-2|PRDX5;nc|ENSG00000126432|P30044-3|PRDX5;nc|ENSG00000126432|P30044-4|PRDX5 49.55428908609986 0.0827668555218455 3 MVVQD{[VA]|[{I|L}G]}V[KA] 10 0 + 77.541 0.0 0.0 7.325 7.325 90.986 0.0 0.0 0.0 55.602802969692746 1.1709124234504031 1.1709124234504031 9.164539485499247 0 0.805462187404089 2.0 0.7614393726401688 0.4247425010840047 + + MVVQD{[VA]|[{I|L}G]}V[KA];MVV[AG]D{[VA]|[{I|L}G]}V[KA] 7.325;6.4593 +;- + 164 + 1 1.579 42118.9 1.0 5075 5311 10383 HBL1_DMSO_200M_050219_1,10388 HBL1_DMSO_200M_050219_1,10388,MVVQDGIVKA True True MVVQDGIVKA 54.269192 530.29844969511 43555544.0 10383.0 ENSG00000126432|ENST00000265462|PRDX5;;nc|ENSG00000126432|P30044-2|PRDX5;;nc|ENSG00000126432|P30044-3|PRDX5;;nc|ENSG00000126432|P30044-4|PRDX5 8.486989974975586 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10389 54.274 270.0 420960.0 25 0 55416.0 + 9062 EFTPPVQAAYQK 12 107 689.8532626728903 1377.6919724125803 2 689.8547241091728 MULTI CID FTMS 0 0 0 10383 867627.6875 1.0 0 0.0 6 Unmodified _FESENQKLQQK_ ENSG00000244734|ENST00000335295|HBB 21.53697664764585 0.586507868110548 3 [{M(Oxidation (M))|F}E]TPPVQSAQ{M(Oxidation (M))|F}K 12 7 + 75.543 0.0 0.0 5.4833 5.4833 74.13 0.0 0.0 0.0 53.68226248603395 13.268020044293444 13.268020044293444 0.1230450566754512 0 0.805462187404089 0.0 0.4247425010840047 0.9698565171985376 [{M(Oxidation (M))|F}E]TPPVQSAQ{M(Oxidation (M))|F}K;[{M(Oxidation (M))|F}E]TPPVQSA{M(Oxidation (M))|F}QK;[{M(Oxidation (M))|F}E]TPPVQAAYQK;[{M(Oxidation (M))|F}E]TPPVQASQ{M(Oxidation (M))|F}K;[{M(Oxidation (M))|F}E]TPPVQAS{M(Oxidation (M))|F}QK;[{M(Oxidation (M))|F}E]TPPV[SG]AAQ{M(Oxidation (M))|F}K;[{M(Oxidation (M))|F}E]TPPV[SG]AA{M(Oxidation (M))|F}QK;[{M(Oxidation (M))|F}E]TPPVQSA[AG]{M(Oxidation (M))|F}K;[{M(Oxidation (M))|F}E]TPPV[AG]SAQ{M(Oxidation (M))|F}K;[{M(Oxidation (M))|F}E]TPPVQSA{M(Oxidation (M))|F}[AG]K 5.4833;5.4744;5.3465;5.137;5.128;5.0414;5.0325;4.8229;4.8229;4.814 -;-;-;-;-;-;-;-;-;- 3671 + 1 1.579 87686.2 1.0 5076 5311 10383 HBL1_DMSO_200M_050219_1,10389 HBL1_DMSO_200M_050219_1,10389,FESENQKLQQK False True EFTPPVQAAYQK 54.274198 689.854724109173 10215419.0 10383.0 ENSG00000244734|ENST00000335295|HBB 9.164341608683268 2.0 False 12.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10390 54.279 272.0 376470.0 25 0 35852.0 + 4992 DGTIFHRSI 9 113 523.2756783510458 1044.5368037688916 2 523.2747070193291 MULTI CID FTMS 0 0 0 10383 875049.3125 0.2373588769082154 -2 0.0879440307617187 7 Unmodified _DGTIFHRSI_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 37.07464296494664 0.0915153923251136 3 DGT{I|L}{M(Oxidation (M))|F}HRTV 9 2 + 73.815 0.0 0.0 7.0668 7.0668 80.803 0.0 0.0 0.0 20.501896823007822 1.1394335230683623 1.1394335230683623 1.1394335230683623 0 1.079689690656103 0.7958800173440752 0.0 0.4247425010840047 DGT{I|L}{M(Oxidation (M))|F}HRTV;DGT{I|L}{M(Oxidation (M))|F}HRS{I|L};DGT{I|L}{M(Oxidation (M))|F}H{[TV]|[{I|L}S]}R;DGT{I|L}{M(Oxidation (M))|F}{I|L}[HS]R;DGT{I|L}{I|L}{M(Oxidation (M))|F}[HS]R;{I|L}C(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F}HRTV;{I|L}C(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F}HRS{I|L};DGT{I|L}[KC]{[NV]|[RG]}PV;{I|L}C(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F}H{[TV]|[{I|L}S]}R;{I|L}[CG]{I|L}{M(Oxidation (M))|F}HRTV 7.0668;6.9577;6.2528;5.5836;5.3473;5.104;4.9949;4.2973;4.29;4.2173 -;+;-;-;-;-;-;-;-;- + 388 + 1 1.579 82567.6 1.0 5077 5311 10383 HBL1_DMSO_200M_050219_1,10390 HBL1_DMSO_200M_050219_1,10390,DGTIFHRSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10391 54.288 496.0 521540.0 25 0 98092.0 + 6604 EAPTIVKV 8 149 428.76091766040025 855.5072823876005 2 428.7610656619072 MULTI CID FTMS 0 0 0 10383 363794.96875 1.0 0 0.0 8 Unmodified _EAPTIVKV_ ENSG00000170017|ENST00000306107|ALCAM;ENST00000470756.5_1_3:105086066-105243357:+|nuORF;ENST00000481337.5_1_3:105238990-105260608:+|nuORF;nc|ENSG00000170017|Q13740-2|ALCAM;nc|ENSG00000170017|Q13740-3|ALCAM 19.256988751693697 0.6264283240490721 3 {[CP]|[EA]}PT{I|L}VKV 8 0 + 26.71 0.0 0.0 3.1222 3.1222 82.563 0.0 0.0 0.0 12.888797972277208 10.88554074136319 10.88554074136319 26.710343582005287 0 0.1923877696554315 0.0 0.0 0.1421590589602531 + + {[CP]|[EA]}PT{I|L}VKV 3.1222 + + 104 + 1 1.579 200553.3 1.0 5078 5311 10383 HBL1_DMSO_200M_050219_1,10391 HBL1_DMSO_200M_050219_1,10391,EAPTIVKV False True EAPTIVKV 54.287982 428.761065661907 1907687.25 10383.0 nc|ENSG00000170017|Q13740-2|ALCAM;;nc|ENSG00000170017|Q13740-3|ALCAM;;ENSG00000170017|ENST00000306107|ALCAM;;ENST00000481337.5_1_3:105238990-105260608:+|nuORF;;ENST00000470756.5_1_3:105086066-105243357:+|nuORF 4.6884933312733965 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10392 54.299 618.0 151130.0 25 0 42409.0 -1 0 35 1160.5019941379371 3478.484153014012 3 1161.169970691204 MULTI CID FTMS 0 0 0 10383 335422.65625 1.0 0 0.0 9 3 E 1 -1 6.9897 0.0 0.0 0.20094 0.0 0.0 2822.2542760695083 524.1628512018186 3346.417127271327 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20094 - 12 + 1 1.579 81486.2 1.0 5079 5311 10383 HBL1_DMSO_200M_050219_1,10392 HBL1_DMSO_200M_050219_1,10392, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10393 54.309 561.0 292480.0 25 0 20603.0 16755 KFLGAGTA 8 201 382.71883841703686 763.4231239008737 2 382.7191955447197 MULTI CID FTMS 0 0 0 10383 325580.4375 1.0 0 0.0 10 Unmodified _KFLGAGTA_ ENSG00000175564|ENST00000314032|UCP3;ENSG00000175567|ENST00000663595|UCP2;ENST00000543714.5_1_11:73689288-73689423:-|nuORF;nc|ENSG00000175564|P55916-2|UCP3;nc|ENSG00000175564|P55916-3|UCP3 5.230669730166228 0.792582437072536 3 [{M(Oxidation (M))|F}E]VRT{I|L} 6 6 + 29.854 0.0 0.0 3.9105 3.9105 83.998 0.0 0.0 0.0 16.755018336798962 14.932437070873526 14.932437070873526 21.47901461736877 0 0.0 0.0 0.4386218330464625 0.2614393726401688 [{M(Oxidation (M))|F}E]VRT{I|L};[{M(Oxidation (M))|F}E]V{[VA]|[{I|L}G]}S{I|L};[{M(Oxidation (M))|F}E]V[{I|L}V]{[SA]|[TG]};[{M(Oxidation (M))|F}E]{I|L}RS{I|L};[H{I|L}][HK]MV 3.9105;1.097;1.0112;0.96684;0.69187 -;-;-;-;- 125 + 1 1.579 125388.7 1.0 5080 5311 10383 HBL1_DMSO_200M_050219_1,10393 HBL1_DMSO_200M_050219_1,10393,KFLGAGTA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10394 54.317 476.0 312220.0 25 0 25332.0 + 21857 LPPEKYMRV 9 149 566.8123838882236 1131.6102148432471 2 566.8131591677666 MULTI CID FTMS 0 0 0 10383 231235.5 0.9960784355957218 2 -0.1800003051757812 11 Unmodified _LPPEKYMRV_ ENSG00000139618|ENST00000380152|BRCA2 27.628801355627647 0.1796483985696185 3 {I|L}PPEKY 6 3 54.875 0.0 0.0 4.8493 0.0 0.0 0.0 401.1975191705688 401.1975191705688 31.14638779968488 0.0 0.0 0.0 0 0.6861818737241735 1.6989700043360187 0.0 0.3054621874040891 + {I|L}PPEKY 4.8493 + + 518 + 1 1.579 116856.4 1.0 5081 5311 10383 HBL1_DMSO_200M_050219_1,10394 HBL1_DMSO_200M_050219_1,10394,LPPEKYMRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10395 54.326 518.0 239380.0 25 0 20399.0 + 2408 AQQCLASCLL 10 164 525.259820271001 1048.505087608802 2 525.7614623904228 MULTI CID FTMS 0 0 0 10383 215290.625 1.0 0 0.0 12 Unmodified _AQQCLASCLL_ REV__ENST00000497070.1_1_3:184055391-184056524:+|nuORF 14.838274106304384 0.5985701837916485 3 {[ET]|[MV]}PDTVDGV 9 -1 42.801 0.0 0.0 4.0821 0.0 0.0 0.0 132.0460604303344 132.0460604303344 13.415149811213505 0.0 0.0 0.0 0 0.0 0.0 1.25 0.0 {[ET]|[MV]}PDTVDGV 4.0821 - 3231 + 1 1.579 104461.8 1.0 5082 5311 10383 HBL1_DMSO_200M_050219_1,10395 HBL1_DMSO_200M_050219_1,10395,AQQCLASCLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10396 54.339 661.0 159690.0 25 0 10879.0 15336 IPLQLVTV 8 156 441.7883788943291 0 441.7883788943291 PEAK CID FTMS 0 0 0 -1 0 13 Unmodified _IPLQLVTV_ ENSG00000172845|ENST00000310015|SP3;ENST00000465379.1_1_2:174774671-174778005:-|nuORF;nc|ENSG00000172845|Q02447-2|SP3;nc|ENSG00000172845|Q02447-3|SP3;nc|ENSG00000172845|Q02447-4|SP3;nc|ENSG00000172845|Q02447-5|SP3;nc|ENSG00000172845|Q02447-6|SP3 20.871210003555333 0.4015059659087983 3 GK 2 8 7.4743 0.0 0.0 0.84784 0.0 0.0 440.30630942207193 253.10981165103752 693.4161210731095 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GK 0.84784 - 59 + 1 1.579 88403.7 1.0 5083 5311 10383 HBL1_DMSO_200M_050219_1,10396 HBL1_DMSO_200M_050219_1,10396,IPLQLVTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10397 54.35 631.0 214070.0 25 0 24333.0 19078 LDRLISHCGPV 11 142 605.3236505934199 0 605.3242065310478 PEAK CID FTMS 0 0 0 10383 172511.421875 1.0 0 0.0 14 Unmodified _LDRLISHCGPV_ ENSG00000165195|ENST00000333590|PIGA;nc|ENSG00000165195|P37287-2|PIGA;nc|ENSG00000165195|P37287-3|PIGA 17.11289562659939 0.3845757490720307 3 {I|L}AA{[{M(Oxidation (M))|F}H]|[RQ]}VN 7 9 15.546 0.0 0.0 1.2862 0.0 0.0 63.99423647841156 389.1955965631469 453.1898330415585 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6549471895720985 {I|L}AA{[{M(Oxidation (M))|F}H]|[RQ]}VN 1.2862 - 49 + 1 1.579 99704.7 1.0 5084 5311 10383 HBL1_DMSO_200M_050219_1,10397 HBL1_DMSO_200M_050219_1,10397,LDRLISHCGPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10398 54.361 651.0 54511.0 25 0 4467.8 -1 0 65 612.9518310427666 0 612.9518310427666 PEAK CID FTMS 0 0 0 -1 0 15 3 T 1 -1 6.7474 0.0 0.0 0.55131 0.0 0.0 856.7382209008023 263.08078943424067 1119.819010335043 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 T 0.55131 - 35 + 1 1.579 32952.2 1.0 5085 5311 10383 HBL1_DMSO_200M_050219_1,10398 HBL1_DMSO_200M_050219_1,10398, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10400 54.365 12.0 6215600.0 25 0 598170.0 + 41596 VPPLATNTV 9 96 456.263596554667 910.512640176134 2 456.2637206912041 MULTI CID FTMS 0 0 0 10399 4111590.25 0.4106254582795116 -5 0.3789176940917969 1 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 42.09456458481378 0.0639583784996157 3 [{I|L}P]PATNVTV 9 3 + 64.39 0.0 0.0 7.0719 7.0719 81.868 0.0 0.0 0.0 6.320232147054057 16.478174818886373 6.320232147054057 1.7609125905568137 0 0.7742275032520141 1.154901959985743 0.3494850021680094 0.0 [{I|L}P]PATNVTV;[{I|L}P]APTNVTV;[VP]P[VS]NVTV;[VP][VS]PNVTV;[{I|L}P]ATPNVTV;[{I|L}P]PATGGVTV;[{I|L}P]APTGGVTV;[VP]P{I|L}A{[QS]|[NT]}TV;[VP]P[QT]AVTV;[VP]P[VS]GGVTV 7.0719;6.8785;6.3777;6.2713;6.1108;6.0605;5.8671;5.8005;5.3963;5.3664 -;-;-;-;-;-;-;+;-;- + 778 1 1.571 62828.6 1.0 5086 5312 10399 HBL1_DMSO_200M_050219_1,10400 HBL1_DMSO_200M_050219_1,10400,VPPLATNTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10401 54.367 68.0 802980.0 25 0 194350.0 3200 AVWKHNIIYV 10 43 414.9034433728866 1241.68850071886 3 414.9034911990166 MULTI CID FTMS 0 0 0 10399 613026.875 0.3943002474398943 1 -0.0789909362792968 2 Unmodified _AVWKHNIIYV_ ENSG00000134900|ENST00000376052|TPP2;nc|ENSG00000134900|P29144|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 5.783430956126388 0.6998847395148697 3 {I|L}YV 3 7 27.435 0.0 0.0 2.2095 0.0 0.0 848.463197832857 0.0 848.463197832857 0.0 24.336068845642203 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}YV 2.2095 + + 5 1 1.571 50576.5 1.0 5087 5312 10399 HBL1_DMSO_200M_050219_1,10401 HBL1_DMSO_200M_050219_1,10401,AVWKHNIIYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10402 54.368 2.9 15740000.0 25 0 2319300.0 + 44899 YPPPEVRNI 9 60 542.7931421868918 1083.5717314405836 2 542.7932006716728 MULTI CID FTMS 0 0 0 10399 16538227.0 0.3480736289585202 1 -0.0789909362792968 3 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 20.580933911654288 0.2795815587326093 3 YPPPE 5 4 62.206 0.0 0.0 5.7408 0.0 0.0 0.0 497.2851656549438 497.2851656549438 51.74865027867405 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YPPPE 5.7408 + + 22 + 1 1.571 43590.8 1.0 5088 5312 10399 HBL1_DMSO_200M_050219_1,10402 HBL1_DMSO_200M_050219_1,10402,YPPPEVRNI False True YPPPEVRNI 54.368277 542.793200671673 4413029376.0 10399.0 ENSG00000099995|ENST00000215793|SF3A1;;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;;nc|ENSG00000099995|Q15459-2|SF3A1;;ENST00000496189.1_1_22:30748938-30752805:-|nuORF 6.391232490539551 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10403 54.369 28.0 5168300.0 25 0 635980.0 + 3877 DALAKVTKI 9 126 479.8003613815292 957.5861698298584 2 479.8003723025322 MULTI CID FTMS 0 0 0 10399 2249141.25 0.5140483634507369 -1 0.1010093688964843 4 Unmodified _DALAKVTKI_ ENSG00000213380|ENST00000306875|COG8 59.05245873256422 0.0266066919017776 3 DA{I|L}AKVTK{I|L} 9 0 + 99.062 0.0 0.0 10.345 10.345 91.586 0.0 0.0 0.0 61.37479256446176 13.46787486224656 13.46787486224656 5.889790203557922 0 2.110924374808178 2.0 0.4247425010840047 0.1923877696554315 + + DA{I|L}AKVTK{I|L};DA{I|L}AKVKT{I|L};DA{I|L}{I|L}[KG]TK{I|L};DA{I|L}AKV{I|L}[KT];DA{I|L}{I|L}[KG]KT{I|L};{I|L}GEAKVTK{I|L};{I|L}GEAKVKT{I|L};DA{I|L}{I|L}[KG]{I|L}[KT];{I|L}GE{I|L}[KG]TK{I|L};{I|L}GEAKV{I|L}[KT] 10.345;9.7299;8.4415;8.2226;7.8264;7.3984;6.7834;6.3192;5.495;5.2761 +;-;-;-;-;-;-;-;-;- + 1717 + 1 1.571 110207.7 1.0 5089 5312 10399 HBL1_DMSO_200M_050219_1,10403 HBL1_DMSO_200M_050219_1,10403,DALAKVTKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10404 54.371 48.0 2274700.0 25 0 166570.0 33378 SGLELADLLD 10 127 349.1859144436904 1044.5359139312711 3 349.1857177615166 MULTI CID FTMS 0 0 0 10399 1177291.75 0.3794070872728623 -1 0.1010093688964843 5 Unmodified _SGLELADLLD_ ENSG00000137504|ENST00000527447|CREBZF 13.042465956692816 0.6287021003332052 3 {[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{M(Oxidation (M))|F}HAA{M(Oxidation (M))|F} 8 7 22.396 0.0 0.0 2.1441 0.0 0.0 0.0 82.06701074771718 82.06701074771718 -2.1632091585773985 0.0 -2.1632091585773985 0.0 0 0.0 0.0 0.0 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{M(Oxidation (M))|F}HAA{M(Oxidation (M))|F} 2.1441 - 305 + 1 1.571 93499.7 1.0 5090 5312 10399 HBL1_DMSO_200M_050219_1,10404 HBL1_DMSO_200M_050219_1,10404,SGLELADLLD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10405 54.372 51.0 967380.0 25 0 120760.0 + 21956 LPPMDHSTI 9 81 505.7524556931607 1009.4903584531214 2 505.7534973025322 MULTI CID FTMS 0 0 0 10399 964430.75 0.3866713883121033 1 -0.0789909362792968 6 Unmodified _LPPMDHSTI_ ENSG00000064666|ENST00000263097|CNN2;nc|ENSG00000064666|Q99439-2|CNN2 34.10243960390752 0.1078313939113124 3 {I|L}P{NN|[MP]|[D{I|L}]|[EV]}D[HS]T{I|L} 9 0 + 48.891 0.0 0.0 4.8431 4.8431 85.121 0.0 0.0 0.0 36.90114440339805 2.081750760549568 2.081750760549568 11.1441588315299 0 0.75 2.0 0.75 0.0 + + {I|L}P{NN|[MP]|[D{I|L}]|[EV]}D[HS]T{I|L};{I|L}P[YR]{[YD]|[{M(Oxidation (M))|F}M]}[PS];{I|L}[YR]P{[YD]|[{M(Oxidation (M))|F}M]}[PS] 4.8431;3.7392;0.32009 +;-;- + 132 + 1 1.571 46236.9 1.0 5091 5312 10399 HBL1_DMSO_200M_050219_1,10405 HBL1_DMSO_200M_050219_1,10405,LPPMDHSTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10406 54.373 40.0 1369500.0 25 0 79115.0 25563 NEVLDQLAN 9 84 508.25670065077554 1014.4988483683512 2 508.2569457888603 MULTI CID FTMS 0 0 0 10399 828836.625 0.4090516570227754 1 -0.0789909362792968 7 Unmodified _NEVLDQLAN_ ENSG00000110514|ENST00000706887|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6|MADD 18.1463463914782 0.3454829746528889 3 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V[KS]TP 8 6 29.927 0.0 0.0 2.9499 0.0 0.0 0.0 142.9985746376225 142.9985746376225 11.967809330011434 0.0 0.0 0.0 0 0.0 0.0 0.5044321917401079 0.4247425010840047 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V[KS]TP 2.9499 - 265 1 1.571 48876.0 1.0 5092 5312 10399 HBL1_DMSO_200M_050219_1,10406 HBL1_DMSO_200M_050219_1,10406,NEVLDQLAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10407 54.376 125.0 583190.0 25 0 40520.0 -1 0 76 918.4197275791412 1834.824902225082 2 918.9219848513604 MULTI CID FTMS 0 0 0 10399 794442.0 0.5926188391953671 1 -0.0789909362792968 8 3 PP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DAN{I|L}DP{[QN]|[E{I|L}]|[KN]} 12 -1 45.155 0.0 0.0 2.461 0.0 0.0 496.2660084455094 0.0 496.2660084455094 0.0 35.94720941673181 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.7302046884880937 PP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DAN{I|L}DP{[QN]|[E{I|L}]|[KN]} 2.461 - 768 1 1.571 58821.2 1.0 5093 5312 10399 HBL1_DMSO_200M_050219_1,10407 HBL1_DMSO_200M_050219_1,10407, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10408 54.378 103.0 653830.0 25 0 102680.0 + 36993 TFLQTKSV 8 105 462.2634638000624 0 462.2631103396416 PEAK CID FTMS 0 0 0 10399 471635.0625 0.6615195883552946 -1 0.1010093688964843 9 Unmodified _TFLQTKSV_ REV__ENST00000255305.10_3_13:21357988-21358048:-|nuORF 18.13498045792455 0.4501116112875982 3 ASVQS 5 -1 22.457 0.0 0.0 2.4344 0.0 0.0 379.2100197858685 68.05146204166249 447.261481827531 0.0 0.0 0.0 0.0 0 0.0 0.0 1.466551424848872 0.0 ASVQS 2.4344 - 342 + 1 1.571 56789.4 1.0 5094 5312 10399 HBL1_DMSO_200M_050219_1,10408 HBL1_DMSO_200M_050219_1,10408,TFLQTKSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10409 54.38 91.0 867810.0 25 0 104590.0 + 43056 VYIDKVRSL 9 73 364.8856547394813 1091.635134818644 3 364.8853027224541 MULTI CID FTMS 0 0 0 10399 416967.53125 0.0705939480953556 -2 0.153961181640625 10 Unmodified _VYIDKVRSL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 41.95555342248728 0.0647214845423414 3 VY{I|L}DKVR{[TV]|[{I|L}S]} 9 0 + 75.042 0.0 0.0 6.8742 6.8742 83.8 0.0 0.0 0.0 33.46787486224657 3.0546218740408904 3.0546218740408904 3.0546218740408904 0 0.2742275032520141 1.6989700043360187 0.6861818737241735 0.4247425010840047 + + VY{I|L}DKVR{[TV]|[{I|L}S]};VY{I|L}DKV{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};VY{I|L}DK{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]};VY{I|L}{I|L}[QT]R{[TV]|[{I|L}S]};VY{I|L}{I|L}[QT]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};V{I|L}YDKVR{[TV]|[{I|L}S]};V{I|L}YDKV{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};V{I|L}YDK{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]};V{I|L}Y{I|L}[QT]R{[TV]|[{I|L}S]};V{I|L}Y{I|L}[QT]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 6.8742;6.5944;6.1573;5.1566;4.8768;4.7909;4.5111;4.074;3.0732;2.7934 +;-;-;-;-;-;-;-;-;- + 194 + 1 1.571 75271.6 1.0 5095 5312 10399 HBL1_DMSO_200M_050219_1,10409 HBL1_DMSO_200M_050219_1,10409,VYIDKVRSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10410 54.394 800.0 511810.0 25 0 34662.0 + 3878 DALAKVTKI 9 307 320.2034878710085 957.5886342132256 3 320.2030212283134 MULTI CID FTMS 0 0 0 10399 263975.90625 0.9383014904115784 -1 0.1010093688964843 11 Unmodified _DALAKVTKI_ ENSG00000213380|ENST00000306875|COG8 55.50274090549119 0.0285720310785888 3 DA{I|L}AKVTK{I|L} 9 0 + 88.802 0.0 0.0 9.2735 9.2735 95.386 0.0 0.0 0.0 23.46787486224656 9.356991773862063 9.356991773862063 9.356991773862063 0 0.3252574989159953 1.6989700043360187 0.6694451763165201 0.9291746928241126 + + DA{I|L}AKVTK{I|L};DA{I|L}AKVT{I|L}K;DA{I|L}A{I|L}[KS]K{I|L};DA{I|L}AKVKT{I|L};DA{I|L}AKV{I|L}TK;DA{I|L}{I|L}A[KS]K{I|L};DA{I|L}{I|L}[KG]TK{I|L};DA{I|L}A{I|L}[KS]{I|L}K;DA{I|L}{I|L}A[KS]{I|L}K;DARRVTK{I|L} 9.2735;8.2963;7.9097;7.8714;7.7165;7.5686;6.9871;6.9325;6.5915;6.1907 +;-;-;-;-;-;-;-;-;- + 376 + 1 1.571 323827.3 0.9900000095367432 5096 5312 10399 HBL1_DMSO_200M_050219_1,10410 HBL1_DMSO_200M_050219_1,10410,DALAKVTKI True True DALAKVTKI 54.39386 320.203021228313 24342211.25 10399.0 ENSG00000213380|ENST00000306875|COG8 4.525584618250529 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10411 54.407 753.0 310720.0 25 0 19955.0 + + -1 VPASGLTV 8 182 744.3284996177417 0 744.2909423708916 PEAK CID FTMS 0 0 0 -1 0 12 Carbamidomethyl (C) _FKSQC(Carbamidomethyl (C))HHYFAY_ nc|ENSG00000179889|Q6P996-4|PDXDC1;ENST00000570001.5_1_16:15069056-15125764:+|nuORF;ENST00000530079.5_1_16:70030360-70072929:-|nuORF;nc|ENSG00000179889|Q6P996-5|PDXDC1;nc|ENSG00000255185|Q6P474|PDXDC2P;ENST00000566633.1_1_16:15120373-15125764:+|nuORF;nc|ENSG00000179889|Q6P996-3|PDXDC1;ENSG00000179889|ENST00000396410|PDXDC1;ENST00000531894.5_1_16:70030360-70099817:-|nuORF 5.731851221503515 0.47618401536486 3 {M(Oxidation (M))|F}ANQQ 5 -1 26.682 0.0 0.0 1.7948 0.0 0.0 181.131737434706 714.2093315271251 895.3410689618311 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 {M(Oxidation (M))|F}ANQQ 1.7948 - 2915 + 1 1.571 162961.5 1.0 5097 5312 10399 HBL1_DMSO_200M_050219_1,10411 HBL1_DMSO_200M_050219_1,10411,FKSQCHHYFAY False False VPASGLTV 54.406923 744.290942370892 11848944.0 10399.0 nc|ENSG00000179889|Q6P996-4|PDXDC1;;ENST00000570001.5_1_16:15069056-15125764:+|nuORF;;ENST00000530079.5_1_16:70030360-70072929:-|nuORF;;nc|ENSG00000179889|Q6P996-5|PDXDC1;;nc|ENSG00000255185|Q6P474|PDXDC2P;;ENST00000566633.1_1_16:15120373-15125764:+|nuORF;;nc|ENSG00000179889|Q6P996-3|PDXDC1;;ENSG00000179889|ENST00000396410|PDXDC1;;ENST00000531894.5_1_16:70030360-70099817:-|nuORF 3.423180341720581 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10412 54.421 791.0 697510.0 25 0 42483.0 + 10752 FYKDSGITY 9 218 547.2628930276592 1092.5112331221185 2 547.2623168826103 MULTI CID FTMS 0 0 0 10399 149474.640625 0.2331963608565374 1 -0.0789909362792968 13 Unmodified _FYKDSGITY_ ENSG00000108861|ENST00000226004|DUSP3;nc|ENSG00000108861|P51452-2|DUSP3 27.628801355627647 0.1796483985696185 3 [YV]EV{I|L}{I|L}{I|L}Y 8 6 45.431 0.0 0.0 4.1584 0.0 0.0 0.0 96.92210427349644 96.92210427349644 7.581407624798032 0.0 0.0 0.0 0 0.0 2.0 0.6861818737241735 0.0 [YV]EV{I|L}{I|L}{I|L}Y 4.1584 - 3133 1 1.571 413045.7 1.0 5098 5312 10399 HBL1_DMSO_200M_050219_1,10412 HBL1_DMSO_200M_050219_1,10412,FYKDSGITY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10413 54.434 800.0 132590.0 25 0 21871.0 + -1 YPYDTDECFCF 11 114 758.7714881872494 0 758.7718994021416 PEAK CID FTMS 0 0 0 10399 135323.046875 1.0 0 0.0 14 2 Carbamidomethyl (C) _YPYDTDEC(Carbamidomethyl (C))FC(Carbamidomethyl (C))F_ REV__ENSG00000072274|ENST00000360110|TFRC 1.4819007175156935 0.4761840153648598 3 ANQQ 4 -1 22.251 0.0 0.0 1.4682 0.0 0.0 327.13726875305935 744.1712130182249 1071.3084817712845 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 ANQQ 1.4682 - 191 + 1 1.571 78072.9 0.9800000190734864 5099 5312 10399 HBL1_DMSO_200M_050219_1,10413 HBL1_DMSO_200M_050219_1,10413,YPYDTDECFCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10414 54.44 318.0 291520.0 25 0 20760.0 10257 FQTNLVSY 8 138 486.2447568021976 970.4749606711952 2 486.2449218630791 MULTI CID FTMS 0 0 0 10399 138100.984375 0.3986270682375184 -1 0.1010093688964843 15 Unmodified _FQTNLVSY_ ENSG00000243910|ENST00000490341|TUBA4B 25.399314129420983 0.5099049743284904 3 [{I|L}T]Y[VP]ESY 8 5 [{I|L}T]Y[VP]E + + 27.276 -4.5407 -0.64648 2.8106 2.8106 49.823 0.0 0.0 0.0 0.0 7.81234684152075 0.0 0.0 0 0.3054621874040891 0.0 0.3252574989159953 0.0 [{I|L}T]Y[VP]ESY 2.8106 - 494 + 1 1.571 72705.2 1.0 5100 5312 10399 HBL1_DMSO_200M_050219_1,10414 HBL1_DMSO_200M_050219_1,10414,FQTNLVSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10416 54.444 2.1 40830000.0 25 0 9815400.0 + 15395 IPPDQQRLI 9 64 540.3145428572215 1078.6145327812428 2 540.3148071169853 MULTI CID FTMS 0 0 0 10415 36226952.0 0.695570049854853 2 -0.2263526916503906 1 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 22.736283301280096 0.2418982879461534 3 {I|L}PPDQ 5 4 66.013 0.0 0.0 6.1202 0.0 0.0 0.0 525.3169039361936 525.3169039361936 56.54947189572098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + {I|L}PPDQ 6.1202 + + 53 + 1 1.571 78745.8 1.0 5101 5313 10415 HBL1_DMSO_200M_050219_1,10416 HBL1_DMSO_200M_050219_1,10416,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10417 54.446 3.6 21417000.0 25 0 3938100.0 + 13040 HAVGDIPGV 9 71 432.7324479626828 863.4503429921656 2 432.7325317263603 MULTI CID FTMS 0 0 0 10415 22159278.0 0.768705599821166 2 -0.2263526916503906 2 Unmodified _HAVGDIPGV_ ENSG00000186468|ENST00000296674|RPS23;ENST00000429775.2_1_X:70182861-70183140:+|nuORF 59.79521254764295 0.0261954583213598 3 [HA]VGD{I|L} 6 3 46.26 0.0 0.0 5.3575 0.0 0.0 0.0 268.1285513497948 268.1285513497948 29.71075822590815 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.7614393726401688 0.0 + [HA]VGD{I|L} 5.3575 + + 195 1 1.571 64910.6 1.0 5102 5313 10415 HBL1_DMSO_200M_050219_1,10417 HBL1_DMSO_200M_050219_1,10417,HAVGDIPGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10418 54.447 4.4 4323600.0 25 0 662700.0 + 39578 VCRYRKMF 8 41 368.194404519104 1101.5613841575118 3 368.1941406130791 MULTI CID FTMS 0 0 0 10415 13419887.0 0.7599806344883702 2 -0.2263526916503906 3 Unmodified _VCRYRKMF_ REV__ENST00000382357.3_1_21:34400138-34400483:+|nuORF 6.354104778181461 0.7857632046190106 3 {M(Oxidation (M))|F} 1 -1 13.099 0.0 0.0 1.1891 0.0 0.0 936.4815787149322 0.0 936.4815787149322 0.0 1.839883926472972 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1891 + + 9 + 1 1.571 26217.4 1.0 5103 5313 10415 HBL1_DMSO_200M_050219_1,10418 HBL1_DMSO_200M_050219_1,10418,VCRYRKMF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10419 54.448 18.0 5144600.0 25 0 781540.0 + 35465 STLPKSLSL 9 85 473.2845340313317 944.5545151294634 2 473.2848693728447 MULTI CID FTMS 0 0 0 10415 4128914.5 0.1381873599690271 2 -0.2263526916503906 4 Unmodified _STLPKSLSL_ chr20:43713106-43715163|43|124.74|0.37|8.4|+|0|MYBL2,None|1;chr20:43713106-43715221|22|13.86|0.02|9.29|+|0|MYBL2,None|1;ENSG00000101057|ENST00000217026|MYBL2;nc|ENSG00000101057|P10244-2|MYBL2 45.69961567697781 0.0497987121815769 3 {[MG]|[TS]}{I|L}PTVTKV 9 5 + 61.664 0.0 0.0 6.5284 6.5284 91.531 0.0 0.0 0.0 40.84418475970693 12.674716863400796 12.674716863400796 14.49092531119419 0 1.274227503252014 0.0 0.75 0.6050541008457975 {[MG]|[TS]}{I|L}PTVTKV;{[MG]|[TS]}{I|L}V[TP]TKV;{[MG]|[TS]}{I|L}VA{NN|[MP]|[D{I|L}]|[EV]}KV 6.5284;4.9942;3.9099 -;-;- 237 + 1 1.571 72572.0 1.0 5104 5313 10415 HBL1_DMSO_200M_050219_1,10419 HBL1_DMSO_200M_050219_1,10419,STLPKSLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10420 54.449 27.0 3172100.0 25 0 546070.0 + 15230 IPFSKPVKV 9 84 338.88333375638865 1013.628171869366 3 338.8830749392509 MULTI CID FTMS 0 0 0 10415 2761634.25 0.3504277351686911 2 -0.2263526916503906 5 Unmodified _IPFSKPVKV_ ENSG00000149262|ENST00000534064|INTS4 20.41453444215458 0.284085796332423 3 {I|L}P{M(Oxidation (M))|F}SKPVVK 9 2 + 48.768 0.0 0.0 4.8112 4.8112 73.007 0.0 0.0 0.0 12.986740930057962 0.7918124604762511 0.7918124604762511 0.7918124604762511 0 0.0 0.0 0.0 0.2215141619232908 {I|L}P{M(Oxidation (M))|F}SKPVVK;{I|L}P{M(Oxidation (M))|F}SKPVKV;{I|L}V[MT]KPVVK;{I|L}V[MT]KPVKV;{I|L}[{I|L}T]KVP{[ES]|[DT]|[{I|L}C]}K;{I|L}[{I|L}T]KVKC[{I|L}P] 4.8112;4.7331;3.3369;3.2588;1.4604;1.3745 -;+;-;-;-;- + 528 + 1 1.571 81050.1 1.0 5105 5313 10415 HBL1_DMSO_200M_050219_1,10420 HBL1_DMSO_200M_050219_1,10420,IPFSKPVKV False True IPFSKPVKV 54.449191 338.883074939251 161808724.0 10415.0 ENSG00000149262|ENST00000534064|INTS4 5.408108393351237 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10421 54.45 30.0 1647700.0 25 0 113700.0 + 3619 DADPVHRII 9 74 345.8581905695411 1034.552742308823 3 345.8580505251884 MULTI CID FTMS 0 0 0 10415 2359931.75 0.4960349685339735 2 -0.2263526916503906 6 Unmodified _DADPVHRII_ ENST00000313064.2_1_2:232378824-232378857:-|nuORF 18.1463463914782 0.3454829746528889 3 {[DA]|[EG]}DPVHR{I|L}{I|L} 9 0 + 56.877 0.0 0.0 5.4977 5.4977 90.382 0.0 0.0 0.0 45.90797194541551 4.966299270632035 4.966299270632035 56.87707207549607 0 0.3054621874040891 2.0 0.0 0.0 + + {[DA]|[EG]}DPVHR{I|L}{I|L} 5.4977 + + 70 + 1 1.571 47531.7 1.0 5106 5313 10415 HBL1_DMSO_200M_050219_1,10421 HBL1_DMSO_200M_050219_1,10421,DADPVHRII False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10422 54.452 40.0 1346100.0 25 0 119470.0 + 3621 DADPVHRII 9 85 518.2832040322584 1034.5518551313166 2 518.2836181521416 MULTI CID FTMS 0 0 0 10415 2288674.75 0.4121070359315131 2 -0.2263526916503906 7 Unmodified _DADPVHRII_ ENST00000313064.2_1_2:232378824-232378857:-|nuORF 27.628801355627647 0.1796483985696185 3 {[DA]|[EG]}DPVH 6 3 57.778 0.0 0.0 5.5849 0.0 0.0 0.0 397.2579744928344 397.2579744928344 46.80909368620867 0.0 0.0 0.0 0 1.174742501084005 2.0 0.0 0.0 + {[DA]|[EG]}DPVH 5.5849 + + 34 + 1 1.571 47771.9 1.0 5107 5313 10415 HBL1_DMSO_200M_050219_1,10422 HBL1_DMSO_200M_050219_1,10422,DADPVHRII False True DADPVHRII 54.451549 518.283618152142 110311712.0 10415.0 ENST00000313064.2_1_2:232378824-232378857:-|nuORF 6.834943771362305 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10423 54.453 37.0 3485400.0 25 0 316340.0 + 43058 VYIDKVRSL 9 90 546.8237456832469 1091.6329384332937 2 546.8239623904228 MULTI CID FTMS 0 0 0 10415 1843586.0 0.5581768526667293 -1 0.0789909362792968 8 Unmodified _VYIDKVRSL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 40.23920728925047 0.0741434193262949 3 VY{I|L}DKVR{[TV]|[{I|L}S]} 9 0 + 84.601 0.0 0.0 7.7499 7.7499 94.417 0.0 0.0 0.0 63.631674952134105 3.767186419914097 3.767186419914097 12.780287236002437 0 0.7742275032520141 2.0 0.6747425010840047 0.4247425010840047 + + VY{I|L}DKVR{[TV]|[{I|L}S]};VY{I|L}{I|L}{I|L}VE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};VY{I|L}{I|L}[QT]R{[TV]|[{I|L}S]};V{I|L}YDKVR{[TV]|[{I|L}S]};{I|L}VYDKVR{[TV]|[{I|L}S]};V{I|L}Y{I|L}{I|L}VE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{I|L}VY{I|L}{I|L}VE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};V{I|L}Y{I|L}[QT]R{[TV]|[{I|L}S]};{I|L}VY{I|L}[QT]R{[TV]|[{I|L}S]} 7.7499;6.5792;5.7121;4.8639;4.5881;4.5402;4.2645;2.8261;2.5503 +;-;-;-;-;-;-;-;- + 267 + 1 1.571 103583.4 1.0 5108 5313 10415 HBL1_DMSO_200M_050219_1,10423 HBL1_DMSO_200M_050219_1,10423,VYIDKVRSL True True VYIDKVRSL 54.452728 546.823962390423 197738634.0 10415.0 chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;;ENSG00000113368|ENST00000261366|LMNB1 5.739643732706706 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10424 54.454 64.0 1046800.0 25 0 176730.0 + 22019 LPPPPPPAM 9 83 458.7515933437354 915.4886337542708 2 458.7517272830009 MULTI CID FTMS 0 0 0 10415 1481282.75 0.2116509617385672 19 -1.5734176635742188 9 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 3 [{I|L}P]PPPP 6 3 49.486 0.0 0.0 5.4055 0.0 0.0 0.0 314.11589066749804 314.11589066749804 14.916440611282624 0.0 0.0 0.0 0 1.1861818737241734 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.4055 + + 313 1 1.571 56203.9 1.0 5109 5313 10415 HBL1_DMSO_200M_050219_1,10424 HBL1_DMSO_200M_050219_1,10424,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10425 54.455 43.0 774410.0 25 0 52693.0 + 21257 LPDTMSLTV 9 71 488.7531214727471 975.4916900122944 2 488.7535278201103 MULTI CID FTMS 0 0 0 10415 1213362.75 0.2687858774758206 15 -1.2294540405273438 10 Unmodified _LPDTMSLTV_ REV__ENSG00000134376|ENST00000367400|CRB1;REV__nc|ENSG00000134376|P82279-2|CRB1;REV__nc|ENSG00000134376|P82279-3|CRB1;REV__nc|ENSG00000134376|P82279-4|CRB1 18.13498045792455 0.3457906370836843 3 TV 2 -1 16.555 0.0 0.0 1.697 0.0 0.0 757.3640787835818 0.0 757.3640787835818 0.0 1.7693157241888002 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 TV 1.697 + + 81 + 1 1.571 32355.8 1.0 5110 5313 10415 HBL1_DMSO_200M_050219_1,10425 HBL1_DMSO_200M_050219_1,10425,LPDTMSLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10426 54.457 56.0 443500.0 25 0 32285.0 + 43884 YFRDNPSEL 9 51 570.7700278011597 1139.5255026691193 2 570.7701293826103 MULTI CID FTMS 0 0 0 10415 810175.5625 1.0 0 0.0 11 Unmodified _YFRDNPSEL_ ENSG00000075089|ENST00000188312|ACTR6 13.90604991867851 0.4602628045680013 3 {M(Oxidation (M))|F}{I|L} 2 7 24.222 0.0 0.0 2.1256 0.0 0.0 861.3771085555464 0.0 861.3771085555464 0.0 9.61758134947864 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L} 2.1256 - 61 1 1.571 26293.4 1.0 5111 5313 10415 HBL1_DMSO_200M_050219_1,10426 HBL1_DMSO_200M_050219_1,10426,YFRDNPSEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10427 54.46 130.0 380080.0 25 0 28320.0 -1 RSMELYRNA 9 89 578.2813924311727 1154.5482319291452 2 578.2814819216728 MULTI CID FTMS 0 0 0 10415 677319.5625 0.3424524420456556 2 -0.2263526916503906 12 Oxidation (M) _RSM(Oxidation (M))ELYRNA_ ENSG00000075399|ENST00000389386|VPS9D1;nc|ENSG00000075399|Q9Y2B5-2|VPS9D1 7.289230182591677 0.6602208344931196 3 {[VA]|[{I|L}G]}[PA][WP]P 7 -1 14.225 0.0 0.0 1.2321 0.0 0.0 0.0 433.14783596457295 433.14783596457295 5.272657074340897 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}[PA][WP]P 1.2321 - 131 1 1.571 47992.7 1.0 5112 5313 10415 HBL1_DMSO_200M_050219_1,10427 HBL1_DMSO_200M_050219_1,10427,RSMELYRNA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10428 54.461 59.0 697690.0 25 0 68014.0 + 966 AFPDGRSSF 9 56 492.23294159170655 982.4513302502132 2 492.2329589724541 MULTI CID FTMS 0 0 0 10415 670234.5 0.3520519614974149 -13 1.273029327392578 13 Unmodified _AFPDGRSSF_ ENSG00000110446|ENST00000227880|SLC15A3 9.38312468134398 0.5871240394367778 3 DP{[CP]|[EA]} 4 8 19.253 0.0 0.0 1.9596 0.0 0.0 552.2667713849625 0.0 552.2667713849625 0.0 9.071448593652605 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 DP{[CP]|[EA]} 1.9596 - 18 1 1.571 37243.8 1.0 5113 5313 10415 HBL1_DMSO_200M_050219_1,10428 HBL1_DMSO_200M_050219_1,10428,AFPDGRSSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10429 54.468 407.0 704350.0 25 0 172560.0 + 22274 LPRRPNDIYV 10 113 621.8517854627297 1241.689017992259 2 621.8517944216728 MULTI CID FTMS 0 0 0 10415 579908.875 0.5145220038191517 2 -0.2263526916503906 14 Unmodified _LPRRPNDIYV_ ENSG00000172336|ENST00000303151|POP7 36.39500950444726 0.1956349533321693 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TE{I|L} 5 8 40.859 0.0 0.0 3.2906 0.0 0.0 0.0 635.3731970296218 635.3731970296218 2.525749891599532 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8807196863200843 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TE{I|L} 3.2906 - 222 1 1.571 208680.2 1.0 5114 5313 10415 HBL1_DMSO_200M_050219_1,10429 HBL1_DMSO_200M_050219_1,10429,LPRRPNDIYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10430 54.47 97.0 668470.0 25 0 64736.0 + 37054 TGFSPRQI 8 86 453.2454977186477 904.4764425040954 2 453.2461120486259 MULTI CID FTMS 0 0 0 10415 541578.0625 0.0144459416222681 7 -0.6449775695800781 15 Unmodified _TGFSPRQI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 24.020572477871973 0.5389365498350341 3 TG{M(Oxidation (M))|F}S 4 4 50.477 0.0 0.0 5.5808 0.0 0.0 0.0 509.2846940116417 509.2846940116417 36.49751981665837 0.0 0.0 0.0 0 0.6989700043360187 1.154901959985743 0.0 0.0 + TG{M(Oxidation (M))|F}S 5.5808 + + 100 + 1 1.571 57996.2 1.0 5115 5313 10415 HBL1_DMSO_200M_050219_1,10430 HBL1_DMSO_200M_050219_1,10430,TGFSPRQI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10431 54.475 233.0 621380.0 25 0 41152.0 + 21856 LPPEKYMRV 9 155 378.21111069880914 1131.6115026966274 3 378.2110168337822 MULTI CID FTMS 0 0 0 10415 542262.375 0.4037839594758337 2 -0.2263526916503906 16 Unmodified _LPPEKYMRV_ ENSG00000139618|ENST00000380152|BRCA2 34.40172386719151 0.1061884637610825 3 {I|L}PPEKV 6 3 69.003 0.0 0.0 6.0978 0.0 0.0 0.0 465.1950472467407 465.1950472467407 48.87971920786946 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.3807196863200844 0.3807196863200844 {I|L}PPEKV 6.0978 - 397 + 1 1.571 125712.2 1.0 5116 5313 10415 HBL1_DMSO_200M_050219_1,10431 HBL1_DMSO_200M_050219_1,10431,LPPEKYMRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10432 54.483 478.0 604160.0 25 0 129070.0 + 45953 YYYDTHTNTYY 11 158 752.3067678027958 1502.5989826723917 2 752.3066284060478 MULTI CID FTMS 0 0 0 10415 487895.21875 0.7821460372258432 -1 0.0789909362792968 17 Unmodified _YYYDTHTNTYY_ ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2 114.18643581695662 0.0226817577639348 3 YYYQNTYYYY 10 5 + 94.99 0.0 0.0 6.3217 6.3217 83.171 0.0 0.0 0.0 4.962235285979517 15.026975159433531 4.962235285979517 3.965912507003608 0 1.5114393726401687 2.0 1.7302046884880935 0.0 YYYQNTYYYY;YYD{I|L}DYYYYY;YYQYNTYYYY;[HT]DYTNTYYYY;[YT][HD]TNTYYYY;YYYHSTENTYY;YYD{I|L}YDYYYY;YYYQNYTYYY;YYY[AG]NTYYYY;YYYQGGTYYYY 6.3217;6.0577;6.0221;5.9914;5.9545;5.8065;5.7987;5.7886;5.7118;5.7118 -;-;-;-;-;-;-;-;-;- 188354 1 1.571 199400.2 1.0 5117 5313 10415 HBL1_DMSO_200M_050219_1,10432 HBL1_DMSO_200M_050219_1,10432,YYYDTHTNTYY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10433 54.486 148.0 1157300.0 25 0 176020.0 + 15226 IPFQPRHL 8 136 336.5312856259358 1006.5720274780076 3 336.5309020876884 MULTI CID FTMS 0 0 0 10415 466732.75 1.0 0 0.0 18 Unmodified _IPFQPRHL_ ENSG00000176102|ENST00000323959|CSTF3 32.116972079565 0.368454113111938 3 {I|L}P{M(Oxidation (M))|F}Q[RP]H{I|L} 8 0 + 39.83 0.0 0.0 3.957 3.957 80.089 0.0 0.0 0.0 11.630237372219824 2.395074673262542 2.395074673262542 8.96180513211105 0 0.0 0.0 0.0 0.7134679910804405 + + {I|L}P{M(Oxidation (M))|F}Q[RP]H{I|L};{I|L}P{M(Oxidation (M))|F}K{M(Oxidation (M))|F}G[VS]{I|L};{I|L}P{M(Oxidation (M))|F}[AG][RP]H{I|L};{I|L}P{I|L}[Q{I|L}]{[CA]|SS}H{I|L};{I|L}P{I|L}[RH]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};{I|L}P{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}AAH{I|L} 3.957;3.0667;3.0368;2.2012;1.7299;1.0144 +;-;-;-;-;- + 390 + 1 1.571 137616.0 1.0 5118 5313 10415 HBL1_DMSO_200M_050219_1,10433 HBL1_DMSO_200M_050219_1,10433,IPFQPRHL False True IPFQPRHL 54.486187 336.530902087688 4340820.5 10415.0 ENSG00000176102|ENST00000323959|CSTF3 5.699954191843669 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10434 54.496 546.0 396580.0 25 0 15173.0 + 5639 DPEAGGIGRVV 11 214 535.2859739485405 1068.5573949638808 2 535.2859985232353 MULTI CID FTMS 0 0 0 10415 359855.15625 0.1856280771533206 2 -0.2263526916503906 19 Unmodified _DPEAGGIGRVV_ ENSG00000139990|ENST00000341516|DCAF5;nc|ENSG00000139990|Q96JK2-2|DCAF5;nc|ENSG00000139990|Q96JK2-3|DCAF5 45.739877483867886 0.1412225664835785 3 DPEAG 5 6 55.182 0.0 0.0 5.1642 0.0 0.0 0.0 596.3566088134057 596.3566088134057 24.69273760456403 0.0 0.0 0.0 0 1.1237125054200234 1.5228787452803376 0.3054621874040891 0.0 + DPEAG 5.1642 + + 705 + 1 1.571 164475.2 1.0 5119 5313 10415 HBL1_DMSO_200M_050219_1,10434 HBL1_DMSO_200M_050219_1,10434,DPEAGGIGRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10435 54.506 585.0 200280.0 25 0 10339.0 + -1 SCGDVLVTYTF 11 143 631.2922185645955 1260.5698841959909 2 631.2914916872978 MULTI CID FTMS 0 0 0 10415 296638.8125 1.0 0 0.0 20 Carbamidomethyl (C) _SC(Carbamidomethyl (C))GDVLVTYTF_ REV__ENSG00000164692|ENST00000297268|COL1A2;REV__ENST00000481570.5_1_7:94056869-94058766:+|nuORF 26.268140514670165 0.4754186812857754 3 {[TV]|[{I|L}S]}AEAAYT 8 -1 60.047 0.0 0.0 4.7635 0.0 0.0 0.0 451.16440258882216 451.16440258882216 28.56941077488805 0.0 0.0 0.0 0 0.0 1.5228787452803376 2.1989700043360187 0.0 {[TV]|[{I|L}S]}AEAAYT 4.7635 - 3489 1 1.571 89282.7 1.0 5120 5313 10415 HBL1_DMSO_200M_050219_1,10435 HBL1_DMSO_200M_050219_1,10435,SCGDVLVTYTF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10437 54.51 16.0 2805200.0 25 0 310470.0 -1 SQRAFCTMHFY 11 50 732.3129326918261 1462.611312450452 2 732.3136474490166 MULTI CID FTMS 0 0 0 10436 3432501.0 0.6935366844935344 1 -0.1604804992675781 1 Carbamidomethyl (C),Oxidation (M) _SQRAFC(Carbamidomethyl (C))TM(Oxidation (M))HFY_ ENST00000277415.15_1_9:137989658-137989826:+|nuORF 5.731851221503515 0.8481046878870278 3 [AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 71.744 0.0 0.0 4.9052 4.9052 74.278 0.0 0.0 0.0 6.777807052660819 11.448658907276377 6.777807052660819 1.3559343267104111 0 0.8935078169319297 1.0457574905606752 0.3807196863200844 0.75 [AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]N[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQQGGA{M(Oxidation (M))|F}Y;[AG]GG[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQQGGA{M(Oxidation (M))|F}Y 4.9052;4.8125;4.4418;4.3139;4.2849;4.2849;4.2849;4.1937;4.1937;4.1937 -;-;-;-;-;-;-;-;-;- 332 1 1.571 41671.9 1.0 5121 5314 10436 HBL1_DMSO_200M_050219_1,10437 HBL1_DMSO_200M_050219_1,10437,SQRAFCTMHFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10438 54.513 106.0 478900.0 25 0 99215.0 + 45745 YYIPGQGRSTY 11 34 652.8170727474314 1303.6195925616628 2 652.8176757693291 MULTI CID FTMS 0 0 0 10436 468486.09375 0.2183710984380642 3 -0.2563705444335937 2 Unmodified _YYIPGQGRSTY_ ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 16.565877749689598 0.6905575015977202 3 YY{I|L}PGQ 6 5 56.911 0.0 0.0 4.3656 0.0 0.0 0.0 579.2589205377561 579.2589205377561 49.92152505736741 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + YY{I|L}PGQ 4.3656 + + 40 + 1 1.571 44158.0 1.0 5122 5314 10436 HBL1_DMSO_200M_050219_1,10438 HBL1_DMSO_200M_050219_1,10438,YYIPGQGRSTY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10439 54.515 87.0 688910.0 25 0 49626.0 9813 FPCRQRPL 8 76 508.7786536302368 1015.5427543272737 2 508.7804138064384 MULTI CID FTMS 0 0 0 10436 734078.9375 0.5603929256474243 3 -0.2563705444335937 3 Unmodified _FPCRQRPL_ ENSG00000275572|ENST00000614228|GRIFIN 14.581692164780916 0.6954967302934248 3 GTPE 4 7 35.745 0.0 0.0 3.5198 0.0 0.0 613.3541737287125 0.0 613.3541737287125 0.0 21.7659970366416 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 GTPE 3.5198 - 85 1 1.571 56826.2 1.0 5123 5314 10436 HBL1_DMSO_200M_050219_1,10439 HBL1_DMSO_200M_050219_1,10439,FPCRQRPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10440 54.518 158.0 648030.0 25 0 77157.0 + 45790 YYLNEQGDRVY 11 81 710.3302594086914 1418.6459658841827 2 710.3306762576103 MULTI CID FTMS 0 0 0 10436 706193.6875 0.1880669589071885 -3 0.2458724975585937 4 Unmodified _YYLNEQGDRVY_ ENSG00000182117|ENST00000328848|NOP10 100.7086487251713 0.0002960460221903 3 YY{I|L}NEQGDRVY 11 0 + 135.64 0.0 0.0 9.5614 9.5614 94.062 0.0 0.0 0.0 109.95536133517714 15.070623213458036 15.070623213458036 9.128498242811006 0 1.2302046884880935 2.0 1.110924374808178 1.6549471895720984 + + YY{I|L}NEQGDRVY;YY{I|L}NE[AG]GDRVY;YY{I|L}GGEQGDRVY;YY{I|L}GGE[AG]GDRVY;YY{I|L}NE{NN|[MP]|[D{I|L}]|[EV]}{NN|[MP]|[D{I|L}]|[EV]}VY;[WK][YE]{I|L}[C(Carbamidomethyl (C))C]RVY 9.5614;8.9179;8.9179;8.2766;7.1301;0.45456 +;-;-;-;-;- + 695 + 1 1.571 74067.4 1.0 5124 5314 10436 HBL1_DMSO_200M_050219_1,10440 HBL1_DMSO_200M_050219_1,10440,YYLNEQGDRVY True True YYLNEQGDRVY 54.517665 710.33067625761 65053338.0 10436.0 ENSG00000182117|ENST00000328848|NOP10 8.539761543273926 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10441 54.52 107.0 1071500.0 25 0 54987.0 12831 GVTYVDITVG 10 140 512.2705667185701 1022.5265805039402 2 512.2671386599541 MULTI CID FTMS 0 0 0 10436 668424.0 0.1381456901084293 -3 0.2458724975585937 5 Unmodified _GVTYVDITVG_ ENSG00000106351|ENST00000300176|AGFG2;nc|ENSG00000106351|O95081-2|AGFG2 13.90604991867851 0.6142120002215601 3 {I|L}TGV 4 8 26.049 0.0 0.0 2.5475 0.0 0.0 634.2937446658526 0.0 634.2937446658526 0.0 3.3726712524403446 0.0 0.0 0 0.6307196863200843 0.0 0.0 0.0 {I|L}TGV 2.5475 - 651 + 1 1.571 93231.3 1.0 5125 5314 10436 HBL1_DMSO_200M_050219_1,10441 HBL1_DMSO_200M_050219_1,10441,GVTYVDITVG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10442 54.522 89.0 1380300.0 25 0 143660.0 + 35012 SQPPVQVSV 9 136 470.7592986894834 939.5040444457668 2 470.7614318728447 MULTI CID FTMS 0 0 0 10436 658126.0 0.1212611657987006 -3 0.2458724975585937 6 Unmodified _SQPPVQVSV_ ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12 33.4449034751529 0.1114409586740657 3 [VP]PQVSGASV 10 6 + 39.953 0.0 0.0 4.2525 4.2525 72.76 0.0 0.0 0.0 2.7689631594726194 4.675103814115431 2.7689631594726194 1.7609125905568064 0 0.8182503180159344 0.431798275933005 0.3807196863200844 0.0 [VP]PQVSGASV;[VP]PQVSQSV;{[HG]|PP}VQVSGASV;{[VA]|[{I|L}G]}GPPVSGASV;[AG]PVPVSGASV;{[HG]|PP}VQVSQSV;[QP]VPVSGASV;[VP]QPVSGASV;{[VA]|[{I|L}G]}GPPVSQSV;[AG]PVPVSQSV 4.2525;4.0651;3.9578;3.8782;3.8412;3.7704;3.7704;3.7447;3.6861;3.6491 -;-;-;-;-;-;-;-;-;- 1589 1 1.571 99448.2 1.0 5126 5314 10436 HBL1_DMSO_200M_050219_1,10442 HBL1_DMSO_200M_050219_1,10442,SQPPVQVSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10443 54.525 132.0 1176400.0 25 0 137580.0 + 38635 TTIKAFFPKK 10 143 394.2412955003985 1179.7020571013954 3 394.2408325076103 MULTI CID FTMS 0 0 0 10436 483294.03125 0.0162842685233904 -3 0.2458724975585937 7 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 32.78568957990786 0.2337485590374503 3 TT{I|L}KY{I|L}WKK 9 4 + 86.156 0.0 0.0 7.3032 7.3032 96.11 0.0 0.0 0.0 61.09443572062226 14.688149551762804 14.688149551762804 69.57525767188201 0 0.6989700043360187 1.3979400086720375 0.0 0.805462187404089 TT{I|L}KY{I|L}WKK;[{I|L}T][YK]T{I|L}K[WK];[K{I|L}]YTT{I|L}K[WK];[{I|L}T][YK]{I|L}TK[WK];[{I|L}T]{I|L}[YK]TK[WK] 7.3032;1.4055;0.85294;0.3481;0.069741 -;-;-;-;- 561 + 1 1.571 126714.8 1.0 5127 5314 10436 HBL1_DMSO_200M_050219_1,10443 HBL1_DMSO_200M_050219_1,10443,TTIKAFFPKK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10444 54.537 702.0 413010.0 25 0 33848.0 + 35093 SQVGTVNYM 9 236 499.7342006880359 997.4538484428716 2 499.7348205447197 MULTI CID FTMS 0 0 0 10436 228079.78125 0.6501301631571236 1 -0.1604804992675781 8 Unmodified _SQVGTVNYM_ ENSG00000112742|ENST00000369798|TTK;nc|ENSG00000112742|P33981-2|TTK 69.10491478415734 0.0214449631113747 3 {[QS]|[NT]}VGTV{I|L}SP 9 3 59.15 0.0 0.0 5.9301 0.0 0.0 0.0 125.94960565538112 125.94960565538112 21.56978249067666 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.7372118693881546 0.2215141619232908 {[QS]|[NT]}VGTV{I|L}SP 5.9301 - 6352 1 1.571 215445.7 1.0 5128 5314 10436 HBL1_DMSO_200M_050219_1,10444 HBL1_DMSO_200M_050219_1,10444,SQVGTVNYM True True SQVGTVNYM 54.536753 499.73482054472 2246828.75 10436.0 ENSG00000112742|ENST00000369798|TTK;;nc|ENSG00000112742|P33981-2|TTK 5.731788794199626 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10445 54.55 794.0 366090.0 25 0 33214.0 + 6074 DSPGSLKI 8 225 408.7272935660419 815.4400341988838 2 408.7273437380791 MULTI CID FTMS 0 0 0 10436 233148.3125 0.5636001473976742 -2 0.1448631286621093 9 Unmodified _DSPGSLKI_ ENSG00000148841|ENST00000337478|ITPRIP 32.30548876998284 0.3644845974844379 3 {[DS]|[MA]|[CV]|TT}PG{[TV]|[{I|L}S]}K{I|L} 8 0 + 35.486 0.0 0.0 4.3518 4.3518 83.303 0.0 0.0 0.0 6.989700043360191 10.070848733593053 6.989700043360191 10.070848733593053 0 0.4247425010840047 0.0 0.3252574989159953 0.6382104921644451 + + {[DS]|[MA]|[CV]|TT}PG{[TV]|[{I|L}S]}K{I|L};{[DS]|[MA]|[CV]|TT}PG{[TV]|[{I|L}S]}{I|L}K;{[DS]|[MA]|[CV]|TT}{I|L}[RP]TK;{[DS]|[MA]|[CV]|TT}PG[{I|L}V]TK;{[DS]|[MA]|[CV]|TT}P[R{I|L}]TK 4.3518;3.1167;1.4957;1.2595;1.0585 +;-;-;-;- + 197 + 1 1.571 224541.0 1.0 5129 5314 10436 HBL1_DMSO_200M_050219_1,10445 HBL1_DMSO_200M_050219_1,10445,DSPGSLKI False True DSPGSLKI 54.550459 408.727343738079 3137818.25 10436.0 ENSG00000148841|ENST00000337478|ITPRIP 3.996606349945069 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10446 54.564 780.0 419400.0 25 0 35353.0 39585 VCWAVTRV 8 224 467.2535518462042 0 467.2531310915947 PEAK CID FTMS 0 0 0 10436 217549.375 0.8711637839796429 3 -0.2563705444335937 10 Unmodified _VCWAVTRV_ ENST00000522447.5_1_8:71581276-71581402:-|nuORF 15.847184025352805 0.4758297917908462 3 AMT{I|L} 4 6 22.581 0.0 0.0 2.4216 0.0 0.0 142.0535117126846 371.205927682124 513.2594393948086 0.0 0.0 0.0 0.0 0 0.0 0.0 1.055462187404089 0.0 AMT{I|L} 2.4216 - 207 + 1 1.571 249465.7 1.0 5130 5314 10436 HBL1_DMSO_200M_050219_1,10446 HBL1_DMSO_200M_050219_1,10446,VCWAVTRV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10447 54.578 800.0 333300.0 25 0 27211.0 + 44892 YPPPAPGI 8 235 406.2214075174781 810.4282621017561 2 406.2213317751884 MULTI CID FTMS 0 0 0 10436 180480.796875 0.3712033970781462 -3 0.2458724975585937 11 Unmodified _YPPPAPGI_ ENSG00000205352|ENST00000429243|PRR13;nc|ENSG00000205352|Q9NZ81-2|PRR13 41.81723621529253 0.2038889569391319 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KH 4 6 26.872 0.0 0.0 3.3158 0.0 0.0 0.0 282.1446342405929 282.1446342405929 8.288493772929044 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KH 3.3158 - 363 1 1.571 204167.0 0.8899999856948853 5131 5314 10436 HBL1_DMSO_200M_050219_1,10447 HBL1_DMSO_200M_050219_1,10447,YPPPAPGI False True YPPPAPGI 54.577755 406.221331775188 9442977.0 10436.0 nc|ENSG00000205352|Q9NZ81-2|PRR13;;ENSG00000205352|ENST00000429243|PRR13 5.104740937550862 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10448 54.592 800.0 244660.0 25 0 13710.0 43523 WWWWIWWQWW 10 148 874.9053395397076 0 874.9045898318291 PEAK CID FTMS 0 0 0 10436 176048.125 0.8728357727036204 1 -0.1604804992675781 12 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.3961065659209837 3 DPN{I|L}NADQ[QP]AN{I|L} 13 12 73.235 0.0 0.0 4.1901 0.0 0.0 146.0765959721901 208.0734804742797 354.1500764464698 0.0 0.0 0.0 0.0 0 1.5189301784845295 0.0 0.4247425010840047 1.3129529932484498 DPN{I|L}NADQ[QP]AN{I|L} 4.1901 - 3528 + 1 1.571 130113.9 0.9399999976158142 5132 5314 10436 HBL1_DMSO_200M_050219_1,10448 HBL1_DMSO_200M_050219_1,10448,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 10449 54.607 800.0 214360.0 25 0 7024.1 -1 VTCTGYHQVRC 11 179 690.8126332991586 1379.6107136651171 2 690.8142578005791 MULTI CID FTMS 0 0 0 10436 166724.03125 1.0 0 0.0 13 2 Carbamidomethyl (C) _VTC(Carbamidomethyl (C))TGYHQVRC(Carbamidomethyl (C))_ ENST00000538150.1_1_11:62602806-62603310:-|nuORF 13.042465956692816 0.7638483625850725 3 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQ[TA]A{M(Oxidation (M))|F} 14 -1 + 65.86 0.0 0.0 4.7738 4.7738 72.669 0.0 0.0 0.0 7.132443564850632 0.4840977691767278 0.4840977691767278 0.6472532963665572 0 0.6989700043360187 1.0969100130080565 0.3054621874040891 0.850576203518622 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQ[TA]A{M(Oxidation (M))|F};{[QG]|[NA]}G{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQ[TA]A{M(Oxidation (M))|F};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQN{I|L}Y;{[QG]|[NA]}G{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQN{I|L}Y;{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQQ[TA]A{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{[DS]|[MA]|[CV]|TT}EAQQ[TA]A{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQ[TA]A{M(Oxidation (M))|F};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQQN{I|L}Y;[AG]NA{[DS]|[MA]|[CV]|TT}EAQQ[TA]A{M(Oxidation (M))|F};[AG]GGA{[DS]|[MA]|[CV]|TT}EAQQ[TA]A{M(Oxidation (M))|F} 4.7738;4.7269;4.6246;4.5796;4.3418;4.2568;4.2118;4.1945;4.1846;4.1568 -;-;-;-;-;-;-;-;-;- 6584 1 1.571 123032.5 0.9800000190734864 5133 5314 10436 HBL1_DMSO_200M_050219_1,10449 HBL1_DMSO_200M_050219_1,10449,VTCTGYHQVRC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10450 54.621 800.0 106660.0 25 0 5464.1 + 2932 AVGYKHGLMEA 11 148 588.299525326526 0 588.7839233279228 PEAK CID FTMS 0 0 0 10436 64285.7578125 0.4661153168189328 -3 0.2458724975585937 14 Unmodified _AVGYKHGLMEA_ REV__ENSG00000075702|ENST00000401500|WDR62;REV__ENST00000378860.8_1_19:36545867-36564559:+|nuORF;REV__nc|ENSG00000075702|O43379-2|WDR62;REV__nc|ENSG00000075702|O43379-3|WDR62;REV__nc|ENSG00000075702|O43379|WDR62 13.90604991867851 0.4141907700618076 3 VD 2 -1 10.969 0.0 0.0 0.93387 0.0 0.0 197.14263654198743 760.3277681940061 957.4704047359936 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VD 0.93387 - 209 + 1 1.571 65300.9 0.949999988079071 5134 5314 10436 HBL1_DMSO_200M_050219_1,10450 HBL1_DMSO_200M_050219_1,10450,AVGYKHGLMEA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10451 54.636 800.0 279080.0 25 0 21625.0 27408 PILERVPQ 8 227 476.28487125370367 950.5551895742074 2 476.2874633669853 MULTI CID FTMS 0 0 0 10436 134543.453125 0.2276855842035545 3 -0.2563705444335937 15 Unmodified _PILERVPQ_ ENST00000462742.1_1_21:45751724-45754149:-|nuORF 21.74664581756881 0.5868176546531598 3 {I|L}P[HK]Y 5 7 49.323 0.0 0.0 5.1888 0.0 0.0 0.0 309.1620272272094 309.1620272272094 30.99552388505667 0.0 0.0 0.0 0 1.25 2.0 0.0 0.0 {I|L}P[HK]Y 5.1888 - 1930 + 1 1.571 170249.8 0.8399999737739563 5135 5314 10436 HBL1_DMSO_200M_050219_1,10451 HBL1_DMSO_200M_050219_1,10451,PILERVPQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10452 54.65 800.0 267910.0 25 0 11028.0 + + -1 QVNDAFTHV 9 254 515.249614962868 1028.484676992536 2 515.7540161013603 MULTI CID FTMS 0 0 0 10436 122998.4453125 0.7402769246220797 -6 0.3762359619140625 16 Oxidation (M) _TVATYM(Oxidation (M))VASA_ nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48;ENSG00000114742|ENST00000302313|WDR48;nc|ENSG00000114742|Q8TAF3-5|WDR48 13.90604991867851 0.6142120002215601 3 TVKP{M(Oxidation (M))|F}THV 8 -1 34.322 0.0 0.0 3.3371 0.0 0.0 100.9548894284164 0.0 100.9548894284164 0.0 14.35602614107951 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 TVKP{M(Oxidation (M))|F}THV 3.3371 - 4523 + 1 1.571 160203.1 0.7699999809265137 5136 5314 10436 HBL1_DMSO_200M_050219_1,10452 HBL1_DMSO_200M_050219_1,10452,TVATYMVASA False False QVNDAFTHV 54.64954 515.75401610136 719732.6875 10436.0 nc|ENSG00000114742|Q8TAF3-3|WDR48;;nc|ENSG00000114742|Q8TAF3-4|WDR48;;ENSG00000114742|ENST00000302313|WDR48;;nc|ENSG00000114742|Q8TAF3-5|WDR48 6.549131870269775 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10453 54.652 91.0 1706200.0 25 0 140760.0 + 29198 QGIGKLASV 9 130 436.76361360736655 871.5126742815331 2 436.7637206912041 MULTI CID FTMS 0 0 0 10436 99508.1328125 0.0239345259760685 -3 0.2458724975585937 17 Unmodified _QGIGKLASV_ ENSG00000177600|ENST00000321153|RPLP2;ENST00000525722.1_1_11:811587-812833:+|nuORF;ENST00000526222.5_1_11:810419-812833:+|nuORF;ENST00000532004.5_1_11:810000-812833:+|nuORF 69.10491478415734 0.0214449631113747 3 [KG]{I|L}ASVAQV 9 5 + 36.353 0.0 0.0 4.1712 4.1712 70.822 0.0 0.0 0.0 0.6643834502213508 1.1844000031671769 0.6643834502213508 0.6643834502213508 0 0.3807196863200844 0.0 0.2742275032520141 0.1421590589602531 [KG]{I|L}ASVAQV;{[VA]|[{I|L}G]}KASVAQV;[{I|L}A]KGSVAQV;[VS]A[KA]VAQV;[KG]{I|L}ASVA[AG]V;[KG]{I|L}AVSAQV;{[VA]|[{I|L}G]}KASVA[AG]V;{[VA]|[{I|L}G]}KAVSAQV;[KG]{I|L}A{I|L}GSQV;[KG]{I|L}TGVAQV 4.1712;4.095;3.9173;3.2193;3.1147;3.1071;3.0384;3.0308;3.0162;2.9763 -;-;-;-;-;-;-;-;-;- 1267 1 1.571 122359.5 1.0 5137 5314 10436 HBL1_DMSO_200M_050219_1,10453 HBL1_DMSO_200M_050219_1,10453,QGIGKLASV True True QGIGKLASV 54.651538 436.763720691204 18988988.0 10436.0 ENST00000525722.1_1_11:811587-812833:+|nuORF;;ENSG00000177600|ENST00000321153|RPLP2;;ENST00000526222.5_1_11:810419-812833:+|nuORF;;ENST00000532004.5_1_11:810000-812833:+|nuORF 4.18715238571167 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10454 54.667 800.0 340700.0 25 0 15330.0 + 8189 EPSLKGVGL 9 231 450.2635612528951 898.5125695725902 2 450.2749206423759 MULTI CID FTMS 0 0 0 -1 0 18 Unmodified _EPSLKGVGL_ ENST00000503635.1_1_17:47903366-47904308:+|nuORF 32.30548876998284 0.1201446275138228 3 {[DA]|[EG]}A{I|L}[K{I|L}]TPA 9 6 + 36.528 0.0 0.0 4.0654 4.0654 73.203 0.0 0.0 0.0 10.07128616308077 1.5398434942550097 1.5398434942550097 2.2849483235551773 0 0.5 1.5228787452803376 0.7302046884880937 0.0 {[DA]|[EG]}A{I|L}[K{I|L}]TPA;{[DA]|[EG]}A{I|L}[K{I|L}]PTA;{[DA]|[EG]}A{I|L}[K{I|L}]TAP;[VS]T[RP]AV{[VA]|[{I|L}G]};{[DA]|[EG]}A{I|L}P[K{I|L}]TA;[TP]D{I|L}[KG]V{[VA]|[{I|L}G]};[DP]T{I|L}[KG]V{[VA]|[{I|L}G]};{[DA]|[EG]}A{I|L}P[KA]T{I|L};{[DA]|[EG]}A{I|L}P[VS]KV;[VS]T[K{I|L}][PG][TP] 4.0654;3.8111;3.5344;2.6639;2.6471;2.459;2.4509;2.3108;2.2314;2.2175 -;-;-;-;-;-;-;-;-;- 1736 + 1 1.571 206147.0 0.6399999856948853 5138 5314 10436 HBL1_DMSO_200M_050219_1,10454 HBL1_DMSO_200M_050219_1,10454,EPSLKGVGL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10456 54.671 4.3 14100000.0 25 0 1870500.0 -1 LMLRHGWR 8 56 542.7931421868918 1083.5717314405836 2 542.7933227419853 MULTI CID FTMS 0 0 0 10455 14731597.0 0.3100501902739906 4 -0.3506660461425781 1 Oxidation (M) _LM(Oxidation (M))LRHGWR_ ENSG00000168268|ENST00000422318|NT5DC2;nc|ENSG00000168268|Q9H857-3|NT5DC2;nc|ENSG00000168268|Q9H857-4|NT5DC2;nc|ENSG00000168268|Q9H857|NT5DC2 14.581692164780916 0.6954967302934248 3 YPP 3 -1 50.445 0.0 0.0 4.6555 0.0 0.0 0.0 723.3817856268133 723.3817856268133 43.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPP 4.6555 - 26 + 1 1.592 55955.1 1.0 5139 5315 10455 HBL1_DMSO_200M_050219_1,10456 HBL1_DMSO_200M_050219_1,10456,LMLRHGWR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10457 54.672 13.0 2880300.0 25 0 284180.0 + 41597 VPPLATNTV 9 66 456.263596554667 910.512640176134 2 456.2636901736259 MULTI CID FTMS 0 0 0 10455 7056891.5 0.7047733674862883 -2 0.2263526916503906 2 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 38.15118350030904 0.0856056900103839 3 [VP][VS]PGKEV 9 6 + 44.644 0.0 0.0 4.9032 4.9032 76.972 0.0 0.0 0.0 5.228787452803367 16.478174818886373 5.228787452803367 3.0102999566398125 0 0.5044321917401079 2.0 0.4247425010840047 0.0 [VP][VS]PGKEV;[VP]P[VS]GKEV;[{I|L}P]PATGKEV;[{I|L}P]APTGKEV;[{I|L}P]ATPGKEV 4.9032;4.5725;4.3289;3.5612;3.2306 -;-;-;-;- 223 1 1.592 35141.2 1.0 5140 5315 10455 HBL1_DMSO_200M_050219_1,10457 HBL1_DMSO_200M_050219_1,10457,VPPLATNTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10458 54.673 12.0 4984600.0 25 0 601450.0 + 43057 VYIDKVRSL 9 72 364.8856547394813 1091.635134818644 3 364.8855163455009 MULTI CID FTMS 0 0 0 10455 5866308.0 0.993184867948563 1 -0.0425453186035156 3 Unmodified _VYIDKVRSL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 18.373094154950223 0.3393451798331396 3 VY{I|L}DKV 6 3 65.394 0.0 0.0 5.9904 0.0 0.0 0.0 371.2056368463501 371.2056368463501 58.40411276716473 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 + VY{I|L}DKV 5.9904 + + 77 + 1 1.592 59893.6 1.0 5141 5315 10455 HBL1_DMSO_200M_050219_1,10458 HBL1_DMSO_200M_050219_1,10458,VYIDKVRSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10459 54.674 11.0 10495000.0 25 0 1172600.0 + 4283 DAREAGFQV 9 101 496.7433119905904 991.4720710479808 2 496.7437011599541 MULTI CID FTMS 0 0 0 10455 5921238.0 0.5111091641616476 -2 0.2263526916503906 4 Unmodified _DAREAGFQV_ chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-13|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-6|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 34.93206674587334 0.1032771302489716 3 [AG]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D{M(Oxidation (M))|F}QV 9 4 + 56.635 0.0 0.0 5.7122 5.7122 77.434 0.0 0.0 0.0 1.6516033102399064 16.478174818886373 1.6516033102399064 1.6516033102399064 0 0.6505149978319906 1.6989700043360187 0.3054621874040891 0.3252574989159953 [AG]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}AG{M(Oxidation (M))|F}QV;[AG][W{I|L}]DG{M(Oxidation (M))|F}QV;[AG][W{I|L}]GD{M(Oxidation (M))|F}QV;[AG]V[WE]G{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}[WQ]G{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[HS]{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}QV;[AG]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D{M(Oxidation (M))|F}[AG]V;[AG]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}DQV 5.7122;5.5456;5.3841;5.3841;5.3841;5.1958;5.1688;4.8922;4.7835;4.7724 -;-;-;-;-;-;-;-;-;- 424 1 1.592 91215.9 1.0 5142 5315 10455 HBL1_DMSO_200M_050219_1,10459 HBL1_DMSO_200M_050219_1,10459,DAREAGFQV True True DAREAGFQV 54.674362 496.743701159954 99728048.0 10455.0 nc|ENSG00000132185|Q7L513-3|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;nc|ENSG00000132185|Q7L513-6|FCRLA;;nc|ENSG00000132185|Q7L513-13|FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-8|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA 6.9715576171875 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10460 54.676 16.0 3388500.0 25 0 332480.0 + 9928 FPGKHFQEI 9 100 551.7873955743806 1101.5602382155612 2 551.7877075076103 MULTI CID FTMS 0 0 0 10455 5542589.0 0.4206302925141684 4 -0.3506660461425781 5 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 39.21299971606389 0.0797768173001226 3 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 6 + 44.843 0.0 0.0 4.0709 4.0709 78.361 0.0 0.0 0.0 6.320684442917603 6.320684442917603 6.320684442917603 6.320684442917603 0 0.3494850021680094 0.0 1.0 0.8494850021680094 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KG]P{M(Oxidation (M))|F}HQ{M(Oxidation (M))|F}{I|L}E;[KG]P{M(Oxidation (M))|F}HQE{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}Q[VP]C(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}{I|L}Q{M(Oxidation (M))|F}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[AG][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]H[KG]PE;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[YK]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KG]P{M(Oxidation (M))|F}H{M(Oxidation (M))|F}Q{I|L}E;[KG]P{M(Oxidation (M))|F}HQ{M(Oxidation (M))|F}E{I|L} 4.0709;3.4971;3.4571;3.2729;3.2522;3.23;2.7739;2.7531;2.6784;2.6784 -;-;-;-;-;-;-;-;-;- 679 + 1 1.592 48626.1 1.0 5143 5315 10455 HBL1_DMSO_200M_050219_1,10460 HBL1_DMSO_200M_050219_1,10460,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10461 54.677 24.0 2371900.0 25 0 320440.0 + 41722 VPSTAIREI 9 73 493.28757048685713 984.5605880405144 2 493.2879211306572 MULTI CID FTMS 0 0 0 10455 3502569.0 0.2728180226305589 -2 0.2263526916503906 6 Unmodified _VPSTAIREI_ ENSG00000123374|ENST00000266970|CDK2;ENSG00000170312|ENST00000395284|CDK1;ENSG00000250506|ENST00000448471|CDK3;ENST00000475504.6_1_10:62539923-62545554:+|nuORF;ENST00000567351.5_2_17:73997368-73998786:+|nuORF;nc|ENSG00000123374|P24941-2|CDK2;nc|ENSG00000170312|P06493-2|CDK1 36.506200033944 0.094635877243972 3 VPSTA{I|L}{[RE]|[WV]}{I|L} 9 0 + 79.134 0.0 0.0 8.0375 8.0375 94.26 0.0 0.0 0.0 68.67676984150563 2.987956947427506 2.987956947427506 10.135728071892744 0 0.3494850021680094 2.0 0.8494850021680094 0.2742275032520141 + + VPSTA{I|L}{[RE]|[WV]}{I|L};VPSTA{I|L}[KQ]AA;[{I|L}T]S[PG]{I|L}{[RE]|[WV]}{I|L} 8.0375;7.0081;0.97946 +;-;- + 116 + 1 1.592 47976.5 1.0 5144 5315 10455 HBL1_DMSO_200M_050219_1,10461 HBL1_DMSO_200M_050219_1,10461,VPSTAIREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10462 54.678 29.0 4243600.0 25 0 624340.0 + 970 AFPGGAKEL 9 90 445.2424455140612 888.4703380949225 2 445.2429687380791 MULTI CID FTMS 0 0 0 10455 1843904.75 0.3475606026491932 4 -0.3506660461425781 7 Unmodified _AFPGGAKEL_ ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B 22.736283301280096 0.2418982879461534 3 [PG]QKE{I|L}{[MS]|[{M(Oxidation (M))|F}A]} 8 6 + 23.219 0.0 0.0 2.6134 2.6134 74.268 0.0 0.0 0.0 3.944529100692265 -0.0695204045431907 -0.0695204045431907 5.282737771670437 0 0.0 0.6989700043360187 0.4247425010840047 0.0 [PG]QKE{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[PG]GAKE{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[NP]AKE{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[VG][QT]GP{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[KA][NP]E{I|L}{[MS]|[{M(Oxidation (M))|F}A]} 2.6134;2.0188;1.675;0.60593;0.055034 -;-;-;-;- 95 1 1.592 98574.9 1.0 5145 5315 10455 HBL1_DMSO_200M_050219_1,10462 HBL1_DMSO_200M_050219_1,10462,AFPGGAKEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10463 54.679 51.0 1854800.0 25 0 240020.0 -1 0 94 315.2028392432931 628.3911255533862 2 315.2026550173759 MULTI CID FTMS 0 0 0 10455 1524404.625 1.0 0 0.0 8 3 E{I|L}{I|L}RV 5 -1 + 54.614 0.0 0.0 8.691 8.691 83.913 0.0 0.0 0.0 30.624693683041503 1.0914446942506828 1.0914446942506828 1.0914446942506828 0 0.0 1.6989700043360187 0.0 0.2887254899964357 E{I|L}{I|L}RV;E{I|L}{I|L}VR;E{I|L}V{I|L}R 8.691;8.5173;7.5788 -;-;- 65 + 1 1.592 79525.4 1.0 5146 5315 10455 HBL1_DMSO_200M_050219_1,10463 HBL1_DMSO_200M_050219_1,10463, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10464 54.681 54.0 2197300.0 25 0 224570.0 + 38639 TTIKAFFPKK 10 102 590.8582983762967 1179.702043819393 2 590.8588134646416 MULTI CID FTMS 0 0 0 10455 1503915.625 0.2581814772551503 -2 0.2263526916503906 9 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 43.9818466556824 0.1155196613165264 3 TT{I|L}KY{I|L}WKK 9 4 + 106.95 0.0 0.0 9.0657 9.0657 98.472 0.0 0.0 0.0 79.55259398656281 18.46787486224656 18.46787486224656 42.25533925370486 0 2.610924374808178 1.3010299956639813 0.0 0.3494850021680094 TT{I|L}KY{I|L}WKK;{[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK;{[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}{[SA]|[TG]}RK;TT{I|L}K[RH][K{I|L}][PS];{[DS]|[MA]|[CV]|TT}{I|L}{M(Oxidation (M))|F}[K{I|L}]TTKK;[K{I|L}]Y[W{I|L}]TTKK;[Y{I|L}][{I|L}A]{I|L}[KC]TKK;[WK]{I|L}[Y{I|L}]TTKK;[Y{I|L}]K[W{I|L}]TTKK;[W{I|L}]Y[K{I|L}]TTKK 9.0657;5.4838;4.0243;3.8056;2.5237;2.2506;2.0912;1.9797;1.9386;1.5342 -;-;-;-;-;-;-;-;-;- 976 + 1 1.592 88947.0 1.0 5147 5315 10455 HBL1_DMSO_200M_050219_1,10464 HBL1_DMSO_200M_050219_1,10464,TTIKAFFPKK True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10465 54.683 86.0 972740.0 25 0 125080.0 + 21957 LPPMDHSTI 9 95 505.7524556931607 1009.4903584531214 2 505.7529174685478 MULTI CID FTMS 0 0 0 10455 1392901.25 0.5584590289340775 4 -0.3506660461425781 10 Unmodified _LPPMDHSTI_ ENSG00000064666|ENST00000263097|CNN2;nc|ENSG00000064666|Q99439-2|CNN2 57.47134341890925 0.0274820932774257 3 {I|L}PPMD[HS]T{I|L} 9 0 + 63.025 0.0 0.0 6.2433 6.2433 92.075 0.0 0.0 0.0 39.08532399315358 7.480618166525396 7.480618166525396 29.904111613063364 0 0.6643943297944485 2.0 0.8633643341304672 0.0 + + {I|L}PPMD[HS]T{I|L};{I|L}PP[YV][YC(Carbamidomethyl (C))]V 6.2433;3.281 +;- + 202 + 1 1.592 70984.3 1.0 5148 5315 10455 HBL1_DMSO_200M_050219_1,10465 HBL1_DMSO_200M_050219_1,10465,LPPMDHSTI True True LPPMDHSTI 54.682531 505.752917468548 44906214.0 10455.0 ENSG00000064666|ENST00000263097|CNN2;;nc|ENSG00000064666|Q99439-2|CNN2 5.990145683288574 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10466 54.684 51.0 1372700.0 25 0 149460.0 + 16898 KIIDIQEKV 9 102 362.557283929435 1084.650022388505 3 362.5570861697197 MULTI CID FTMS 0 0 0 10455 1042473.5625 1.0 0 0.0 11 Unmodified _KIIDIQEKV_ ENSG00000047410|ENST00000367478|TPR 29.43715596616401 0.1566398223704148 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{I|L} 5 7 27.241 0.0 0.0 2.5115 0.0 0.0 0.0 499.2488132422738 499.2488132422738 10.931707881835678 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.6861818737241735 0.2887254899964357 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{I|L} 2.5115 - 313 1 1.592 61369.1 1.0 5149 5315 10455 HBL1_DMSO_200M_050219_1,10466 HBL1_DMSO_200M_050219_1,10466,KIIDIQEKV False True KIIDIQEKV 54.683866 362.55708616972 6124355.5 10455.0 ENSG00000047410|ENST00000367478|TPR 1.907162606716156 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10467 54.685 62.0 1190800.0 25 0 263250.0 + 14248 IEALQKAG 8 84 415.2425269351299 828.4705009370598 2 415.2428771853447 MULTI CID FTMS 0 0 0 10455 1001325.4375 0.3947824971458045 -2 0.2263526916503906 12 Unmodified _IEALQKAG_ ENSG00000068650|ENST00000375645|ATP11A;ENST00000459908.5_1_13:113439469-113512287:+|nuORF 26.88365393820708 0.4786498634179528 3 {I|L}EA{I|L}ERV 7 4 + 70.374 0.0 0.0 8.4944 8.4944 96.332 0.0 0.0 0.0 59.404820206900055 14.456319990099118 14.456319990099118 16.70941280735775 0 0.8494850021680094 2.0 0.0 0.5484550065040282 {I|L}EA{I|L}ERV;{I|L}EV[DV]RV;{I|L}[YQ][{I|L}P]PV 8.4944;6.4775;0.47615 -;-;- 136 + 1 1.592 66396.5 1.0 5150 5315 10455 HBL1_DMSO_200M_050219_1,10467 HBL1_DMSO_200M_050219_1,10467,IEALQKAG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10468 54.687 88.0 883440.0 25 0 79421.0 + -1 MPLSTIREV 9 102 531.2869067124046 1060.5592604916092 2 531.2864868044853 MULTI CID FTMS 0 0 0 10455 964436.375 0.5560369190783909 -2 0.2263526916503906 13 Oxidation (M) _M(Oxidation (M))PLSTIREV_ ENSG00000105810|ENST00000424848|CDK6 36.506200033944 0.094635877243972 3 {M(Oxidation (M))|F}P{I|L}ST{I|L}{[RE]|[WV]}V 9 -1 + 55.437 0.0 0.0 5.2272 5.2272 79.31 0.0 0.0 0.0 34.46836073446885 1.5487980323444006 1.5487980323444006 3.735806628125928 0 1.0 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}P{I|L}ST{I|L}{[RE]|[WV]}V;{M(Oxidation (M))|F}P{I|L}ST{I|L}[RD]{I|L};Y{[HG]|PP}ST{I|L}{[RE]|[WV]}V;Y{[HG]|PP}ST{I|L}[RD]{I|L};[KC]{[NV]|[RG]}T{I|L}{[RE]|[WV]}V;[KC]{[NV]|[RG]}T{I|L}[RD]{I|L} 5.2272;4.8749;2.9877;2.6355;0.46562;0.11337 +;-;-;-;-;- + 138 + 1 1.592 64783.3 1.0 5151 5315 10455 HBL1_DMSO_200M_050219_1,10468 HBL1_DMSO_200M_050219_1,10468,MPLSTIREV False False MPLSTIREV 54.687344 531.286486804485 14843239.0 10455.0 ENSG00000105810|ENST00000424848|CDK6 5.762460947036743 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10469 54.69 111.0 707740.0 25 0 81488.0 + 26644 NYETMGRAL 9 94 527.7529426320154 1053.4913323308308 2 527.7533447146416 MULTI CID FTMS 0 0 0 10455 835302.625 0.3998144647493494 -2 0.2263526916503906 14 Unmodified _NYETMGRAL_ ENSG00000102034|ENST00000308167|ELF4;ENSG00000109381|ENST00000686138|ELF2;ENSG00000120690|ENST00000239882|ELF1;ENST00000404600.2_1_6:1514778-1515111:-|nuORF;nc|ENSG00000109381|Q15723-1|ELF2;nc|ENSG00000109381|Q15723-2|ELF2;nc|ENSG00000109381|Q15723-3|ELF2;nc|ENSG00000109381|Q15723-4|ELF2;nc|ENSG00000120690|P32519-2|ELF1 41.8396318013385 0.0653578398400075 3 [YN]ETM 5 4 54.961 0.0 0.0 5.217 0.0 0.0 0.0 412.23196986124526 412.23196986124526 43.36696871556164 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + [YN]ETM 5.217 + + 297 + 1 1.592 62545.0 1.0 5152 5315 10455 HBL1_DMSO_200M_050219_1,10469 HBL1_DMSO_200M_050219_1,10469,NYETMGRAL True True NYETMGRAL 54.689698 527.753344714642 8860557.0 10455.0 nc|ENSG00000109381|Q15723-3|ELF2;;nc|ENSG00000120690|P32519-2|ELF1;;nc|ENSG00000109381|Q15723-2|ELF2;;ENST00000404600.2_1_6:1514778-1515111:-|nuORF;;nc|ENSG00000109381|Q15723-4|ELF2;;nc|ENSG00000109381|Q15723-1|ELF2;;ENSG00000102034|ENST00000308167|ELF4;;ENSG00000109381|ENST00000686138|ELF2;;ENSG00000120690|ENST00000239882|ELF1 6.456063747406006 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10470 54.693 184.0 612260.0 25 0 42963.0 -1 0 96 918.4197275791412 1834.824902225082 2 918.9221679568292 MULTI CID FTMS 0 0 0 10455 785489.0625 0.5859403410436597 4 -0.3506660461425781 15 3 [NP]{I|L}NATPNQDAN{I|L}DP 15 -1 88.138 0.0 0.0 4.8036 0.0 0.0 0.0 257.0529320539408 257.0529320539408 69.09755781146409 0.0 0.0 0.0 0 1.1989700043360187 0.8538719643217619 0.805462187404089 0.3494850021680094 [NP]{I|L}NATPNQDAN{I|L}DP 4.8036 - 11443 1 1.592 78518.7 1.0 5153 5315 10455 HBL1_DMSO_200M_050219_1,10470 HBL1_DMSO_200M_050219_1,10470, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10471 54.696 114.0 771450.0 25 0 66399.0 + 22315 LPSGVTRVV 9 121 464.2847965902956 926.5550402473912 2 464.2850524783134 MULTI CID FTMS 0 0 0 10455 687730.1875 0.976391480020178 2 -0.0958900451660156 16 Unmodified _LPSGVTRVV_ ENSG00000181418|ENST00000421952|DDN 24.99096001346401 0.2132109383330889 3 {I|L}PSGV[RV]TV 9 2 + 57.041 0.0 0.0 6.1563 6.1563 81.841 0.0 0.0 0.0 8.199849938126889 0.4229695845116765 0.4229695845116765 3.357921019231931 0 0.5649093276264391 1.3010299956639813 0.0 0.0 {I|L}PSGV[RV]TV;{I|L}PSGV[RV]S{I|L} 6.1563;5.7939 -;- 412 + 1 1.592 72904.9 1.0 5154 5315 10455 HBL1_DMSO_200M_050219_1,10471 HBL1_DMSO_200M_050219_1,10471,LPSGVTRVV False True LPSGVTRVV 54.695656 464.285052478313 8597258.0 10455.0 ENSG00000181418|ENST00000421952|DDN 3.9313553174336753 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10472 54.701 264.0 861570.0 25 0 43774.0 -1 0 95 572.1291459973233 2855.6093476536166 5 572.3296996951103 MULTI CID FTMS 0 0 0 10455 687837.6875 0.5104044017184949 -2 0.2263526916503906 17 3 PE{I|L}Q 4 -1 61.983 0.0 0.0 2.1706 0.0 0.0 1111.605958026633 1273.7416034081402 2385.347561434773 0.0 0.0 0.0 0.0 0 2.305462187404089 0.0 0.4247425010840047 1.274227503252014 PE{I|L}Q 2.1706 - 114 + 1 1.592 172657.9 1.0 5155 5315 10455 HBL1_DMSO_200M_050219_1,10472 HBL1_DMSO_200M_050219_1,10472, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10473 54.704 158.0 653580.0 25 0 39320.0 + 4994 DGTIFHRSI 9 134 349.1859144436904 1044.5359139312711 3 349.1854431033134 MULTI CID FTMS 0 0 0 10455 682526.375 0.2199585140434861 2 -0.0958900451660156 18 Unmodified _DGTIFHRSI_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 7.608950283845883 0.6490595679007971 3 {[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{M(Oxidation (M))|F}H 5 6 15.942 0.0 0.0 1.5262 0.0 0.0 0.0 371.2056790548756 371.2056790548756 6.851342910370892 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{M(Oxidation (M))|F}H 1.5262 - 159 + 1 1.592 85690.6 1.0 5156 5315 10455 HBL1_DMSO_200M_050219_1,10473 HBL1_DMSO_200M_050219_1,10473,DGTIFHRSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10474 54.706 86.0 673070.0 25 0 52119.0 + 4993 DGTIFHRSI 9 90 523.2756783510458 1044.5368037688916 2 523.2755004763603 MULTI CID FTMS 0 0 0 10455 675492.4375 0.1832286752696499 2 -0.0958900451660156 19 Unmodified _DGTIFHRSI_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 22.65808497894818 0.2428932432760099 3 [DG]T{I|L}{M(Oxidation (M))|F}H 6 3 36.863 0.0 0.0 3.5292 0.0 0.0 0.0 371.2056978815063 371.2056978815063 26.02597893814109 0.0 0.0 0.0 0 0.8447059295562412 0.0 0.0 0.0 + [DG]T{I|L}{M(Oxidation (M))|F}H 3.5292 + + 160 + 1 1.592 47118.0 1.0 5157 5315 10455 HBL1_DMSO_200M_050219_1,10474 HBL1_DMSO_200M_050219_1,10474,DGTIFHRSI False True DGTIFHRSI 54.705581 523.27550047636 42358020.0 10455.0 nc|ENSG00000100023|Q13356-2|PPIL2;;ENSG00000100023|ENST00000398831|PPIL2 4.679530461629232 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10475 54.709 187.0 773580.0 25 0 120880.0 + 985 AFSDRAEEF 9 124 536.241450400864 1070.468347868528 2 536.2416259646416 MULTI CID FTMS 0 0 0 10455 618955.9375 0.5260772602427692 -2 0.2263526916503906 20 Unmodified _AFSDRAEEF_ ENSG00000117450|ENST00000319248|PRDX1 51.41523569358685 0.0372669606867193 3 A{M(Oxidation (M))|F}SDD[DV]R{M(Oxidation (M))|F} 9 4 + 53.795 0.0 0.0 5.0254 5.0254 86.441 0.0 0.0 0.0 29.383024673460056 13.217196696094431 13.217196696094431 13.895840698002992 0 0.9247425010840048 0.0 0.4247425010840047 0.0 A{M(Oxidation (M))|F}SDD[DV]R{M(Oxidation (M))|F};{[ET]|[MV]}Q{[CP]|[EA]}{M(Oxidation (M))|F}AE{M(Oxidation (M))|F};{[ET]|[MV]}Q{[CP]|[EA]}{M(Oxidation (M))|F}EA{M(Oxidation (M))|F};{[ET]|[MV]}Q{[CP]|[EA]}E{M(Oxidation (M))|F}A{M(Oxidation (M))|F};{[ET]|[MV]}[AG]{[CP]|[EA]}{M(Oxidation (M))|F}AE{M(Oxidation (M))|F};{[ET]|[MV]}Q{[CP]|[EA]}EA{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[CP]|[EA]}R[YG]EAE{M(Oxidation (M))|F};[HA]{I|L}YYEE{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[Q{I|L}]E{M(Oxidation (M))|F};{[ET]|[MV]}[AG]{[CP]|[EA]}{M(Oxidation (M))|F}EA{M(Oxidation (M))|F} 5.0254;3.7273;3.1196;3.0982;2.8671;2.817;2.7733;2.4905;2.2833;2.2594 -;-;-;-;-;-;-;-;-;- 427 + 1 1.592 112667.0 1.0 5158 5315 10455 HBL1_DMSO_200M_050219_1,10475 HBL1_DMSO_200M_050219_1,10475,AFSDRAEEF True True AFSDRAEEF 54.709191 536.241625964642 6275238.0 10455.0 ENSG00000117450|ENST00000319248|PRDX1 6.183866818745931 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10477 54.713 2.3 25712000.0 25 0 6455600.0 + 15396 IPPDQQRLI 9 51 540.3145428572215 1078.6145327812428 2 540.3151733279228 MULTI CID FTMS 0 0 0 10476 27595140.0 0.5298362640487019 5 -0.447906494140625 1 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 18.1463463914782 0.3454829746528889 3 {I|L}PPD 4 5 59.993 0.0 0.0 5.562 0.0 0.0 0.0 653.3758009197206 653.3758009197206 50.07129707683461 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + {I|L}PPD 5.562 + + 20 + 1 1.592 54207.6 1.0 5159 5316 10476 HBL1_DMSO_200M_050219_1,10477 HBL1_DMSO_200M_050219_1,10477,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10478 54.715 4.1 12672000.0 25 0 3130900.0 + 9935 FPGKHFQEI 9 83 368.194404519104 1101.5613841575118 3 368.1943542361259 MULTI CID FTMS 0 0 0 10476 13268642.0 0.7514154900081526 5 -0.447906494140625 2 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 18.1463463914782 0.3454829746528889 3 QE{M(Oxidation (M))|F}{I|L} 4 7 24.425 0.0 0.0 2.2173 0.0 0.0 566.2977772443375 0.0 566.2977772443375 0.0 3.2099306354564305 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.8494850021680094 QE{M(Oxidation (M))|F}{I|L} 2.2173 - 102 1 1.592 50369.5 1.0 5160 5316 10476 HBL1_DMSO_200M_050219_1,10478 HBL1_DMSO_200M_050219_1,10478,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10479 54.716 22.0 2283000.0 25 0 365230.0 + 13041 HAVGDIPGV 9 68 432.7324479626828 863.4503429921656 2 432.7324706912041 MULTI CID FTMS 0 0 0 10476 2922149.5 0.1013693985952349 5 -0.447906494140625 3 Unmodified _HAVGDIPGV_ ENSG00000186468|ENST00000296674|RPS23;ENST00000429775.2_1_X:70182861-70183140:+|nuORF 46.92087301778293 0.0471210510596396 3 [HA]VGD{I|L} 6 3 30.309 0.0 0.0 3.5102 0.0 0.0 0.0 268.12903600123235 268.12903600123235 18.52629153640448 0.0 0.0 0.0 0 0.718765315847925 1.2218487496163564 0.4247425010840047 0.0 + [HA]VGD{I|L} 3.5102 + + 50 1 1.592 44656.6 1.0 5161 5316 10476 HBL1_DMSO_200M_050219_1,10479 HBL1_DMSO_200M_050219_1,10479,HAVGDIPGV True True HAVGDIPGV 54.715733 432.732470691204 566837904.0 10476.0 ENSG00000186468|ENST00000296674|RPS23;;ENST00000429775.2_1_X:70182861-70183140:+|nuORF 8.490524291992188 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10480 54.717 32.0 1711500.0 25 0 167830.0 + 43059 VYIDKVRSL 9 57 546.8237456832469 1091.6329384332937 2 546.8240234255791 MULTI CID FTMS 0 0 0 10476 2151211.25 0.6513156017382757 2 -0.1884078979492187 4 Unmodified _VYIDKVRSL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 23.78978130925829 0.2284941198415988 3 VY{I|L}DKV 6 3 69.641 0.0 0.0 6.3795 0.0 0.0 0.0 371.2061861627563 371.2061861627563 52.44972548463494 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + VY{I|L}DKV 6.3795 + + 97 + 1 1.592 47995.8 1.0 5162 5316 10476 HBL1_DMSO_200M_050219_1,10480 HBL1_DMSO_200M_050219_1,10480,VYIDKVRSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10481 54.718 37.0 2367300.0 25 0 511910.0 + 14935 ILMEHIHKL 9 97 378.5547595158914 1132.6424491478742 3 378.5551940798759 MULTI CID FTMS 0 0 0 10476 1479535.625 0.0934487424356975 -2 0.2030258178710937 5 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 49.52724829834842 0.0414064571532091 3 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 93.138 0.0 0.0 8.2231 8.2231 97.32 0.0 0.0 0.0 74.95840852998607 11.100840614449794 11.100840614449794 37.34759407011601 0 0.6203715150305281 2.0 0.7742275032520141 0.2059771852360797 + + {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}ME[R{I|L}][{M(Oxidation (M))|F}V]{I|L};{I|L}{I|L}[YV]EQQK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQK{I|L};{I|L}{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}C]|[YS]}K{I|L};{I|L}[YV]{I|L}EQQK{I|L} 8.2231;4.9257;4.2033;4.1356;3.9554;1.3193 +;-;-;-;-;- + 826 + 1 1.592 78958.7 1.0 5163 5316 10476 HBL1_DMSO_200M_050219_1,10481 HBL1_DMSO_200M_050219_1,10481,ILMEHIHKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10482 54.719 45.0 716740.0 25 0 80828.0 + 30170 QVTLNETV 8 68 452.2426145149488 902.4706760966976 2 452.2430297732353 MULTI CID FTMS 0 0 0 10476 1261090.0 0.3630024695935166 -1 0.0425453186035156 6 Unmodified _QVTLNETV_ ENSG00000154646|ENST00000284885|TMPRSS15 24.67388899826682 0.525179942228231 3 {[VA]|[{I|L}G]}AS 4 7 29.908 0.0 0.0 3.314 0.0 0.0 0.0 571.2722867746851 571.2722867746851 11.464687239169606 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 {[VA]|[{I|L}G]}AS 3.314 - 162 1 1.592 30380.8 1.0 5164 5316 10476 HBL1_DMSO_200M_050219_1,10482 HBL1_DMSO_200M_050219_1,10482,QVTLNETV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10483 54.721 78.0 938850.0 25 0 99073.0 + 12129 GQIVAIKQV 9 107 478.3005841574322 954.5866153816644 2 478.3009521365166 MULTI CID FTMS 0 0 0 10476 979977.5625 0.5503177806972742 -1 0.0425453186035156 7 Unmodified _GQIVAIKQV_ ENSG00000101109|ENST00000372806|STK4;nc|ENSG00000101109|Q13043-2|STK4 49.93300154707207 0.0405168250806675 3 {[VA]|[{I|L}G]}GAVA{I|L}KQV 10 3 {[VA]|[{I|L}G]}GA + + 41.251 16.955 5.6865 4.3214 4.3214 53.459 0.0 0.0 0.0 0.0 7.586496506949786 0.0 0.0 0 1.0189301784845295 0.0 0.0 0.6861818737241735 {[VA]|[{I|L}G]}GAVA{I|L}KQV 4.3214 - 885 + 1 1.592 60228.1 1.0 5165 5316 10476 HBL1_DMSO_200M_050219_1,10483 HBL1_DMSO_200M_050219_1,10483,GQIVAIKQV True True GQIVAIKQV 54.721104 478.300952136517 7882907.5 10476.0 nc|ENSG00000101109|Q13043-2|STK4;;ENSG00000101109|ENST00000372806|STK4 4.887298425038655 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10484 54.722 44.0 691990.0 25 0 104160.0 + 22020 LPPPPPPAM 9 64 458.7515933437354 915.4886337542708 2 458.7516662478447 MULTI CID FTMS 0 0 0 10476 943582.0625 0.1348223700082822 22 -1.8157615661621087 8 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 3 [{I|L}P]PPPP[PA]M 9 0 [{I|L}P]P + + 28.109 19.666 6.4019 3.0704 3.0704 50.341 0.0 0.0 0.0 0.0 8.443350238481028 0.0 0.0 0 1.5 0.0 0.0 0.0 + + [{I|L}P]PPPP[PA]M 3.0704 + + 92 + 1 1.592 28966.6 1.0 5166 5316 10476 HBL1_DMSO_200M_050219_1,10484 HBL1_DMSO_200M_050219_1,10484,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10485 54.724 35.0 634470.0 25 0 42977.0 27438 PISAPEYTV 9 56 488.7531214727471 975.4916900122944 2 488.7531005740166 MULTI CID FTMS 0 0 0 10476 942533.25 0.208791333549169 18 -1.4851226806640625 9 Unmodified _PISAPEYTV_ nc|ENSG00000168958|Q9GZY8|MFF 12.531546534597751 0.4974689918368763 3 V 1 8 13.979 0.0 0.0 1.4331 0.0 0.0 858.4122355218631 0.0 858.4122355218631 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.4331 + + 25 + 1 1.592 25492.6 1.0 5167 5316 10476 HBL1_DMSO_200M_050219_1,10485 HBL1_DMSO_200M_050219_1,10485,PISAPEYTV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10486 54.725 66.0 1029500.0 25 0 241950.0 -1 0 86 522.291865602265 521.284589135665 1 522.2925903201103 MULTI CID FTMS 0 0 0 10476 717957.3125 0.3925913189644843 -1 0.0425453186035156 10 3 [YQ]V{I|L} 4 -1 + 54.302 0.0 0.0 10.417 10.417 94.041 0.0 0.0 0.0 8.876247503589227 8.876247503589227 8.876247503589227 8.876247503589227 0 0.7134679910804405 1.3979400086720375 0.0 0.6989700043360187 [YQ]V{I|L};YQV{I|L};Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Y 10.417;8.7141;4.1678;4.0353;1.8005 -;-;-;-;- 40 1 1.592 57068.8 1.0 5168 5316 10476 HBL1_DMSO_200M_050219_1,10486 HBL1_DMSO_200M_050219_1,10486, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10487 54.728 149.0 315490.0 25 0 105580.0 23054 LSLGAEMWGPE 11 71 595.2827577465246 1188.550962559849 2 595.2839843630791 MULTI CID FTMS 0 0 0 10476 694038.0 0.7102464907755839 -1 0.0425453186035156 11 Unmodified _LSLGAEMWGPE_ ENSG00000143217|ENST00000368012|NECTIN4 8.745405648335112 0.8338865417133445 3 [W{I|L}]AAVTVE 8 8 50.126 0.0 0.0 4.2174 0.0 0.0 0.0 316.0450533502563 316.0450533502563 39.156687756324686 0.0 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 [W{I|L}]AAVTVE 4.2174 - 111 + 1 1.592 44134.9 1.0 5169 5316 10476 HBL1_DMSO_200M_050219_1,10487 HBL1_DMSO_200M_050219_1,10487,LSLGAEMWGPE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10488 54.731 144.0 649090.0 25 0 42399.0 -1 RLMKGEITL 9 133 359.54213475329954 1075.6045748600986 3 359.5451232790947 MULTI CID FTMS 0 0 0 10476 583161.1875 0.1320998334144665 -5 0.4488983154296875 12 Oxidation (M) _RLM(Oxidation (M))KGEITL_ ENSG00000120915|ENST00000521400|EPHX2;ENST00000520623.5_1_8:27348689-27396319:+|nuORF 8.155526934196011 0.6299788542272896 3 [K{I|L}]{[CA]|SS}[VS]NKT{I|L} 10 -1 [K{I|L}]{[CA]|SS}[VS]N + + 15.01 -19.97 -2.7916 1.3955 1.3955 48.494 0.0 0.0 0.0 0.0 2.491596866368017 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 [K{I|L}]{[CA]|SS}[VS]NKT{I|L} 1.3955 - 323 + 1 1.592 78499.6 1.0 5170 5316 10476 HBL1_DMSO_200M_050219_1,10488 HBL1_DMSO_200M_050219_1,10488,RLMKGEITL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10489 54.734 173.0 418930.0 25 0 106400.0 + 30849 RILPQDLERA 10 65 605.8489602939012 1209.6833676546023 2 605.8495971560478 MULTI CID FTMS 0 0 0 10476 511460.875 0.5542765565278338 -1 0.0425453186035156 13 Unmodified _RILPQDLERA_ ENSG00000148296|ENST00000372022|SURF6;ENST00000468290.1_1_9:136198707-136199617:-|nuORF 21.799462835604743 0.4789045305445478 3 R{I|L}{I|L} 3 7 34.693 0.0 0.0 2.8679 0.0 0.0 0.0 824.3933809869749 824.3933809869749 8.737125054200234 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + R{I|L}{I|L} 2.8679 + + 24 + 1 1.592 55171.5 1.0 5171 5316 10476 HBL1_DMSO_200M_050219_1,10489 HBL1_DMSO_200M_050219_1,10489,RILPQDLERA False True RILPQDLERA 54.734347 605.849597156048 4708350.0 10476.0 ENSG00000148296|ENST00000372022|SURF6;;ENST00000468290.1_1_9:136198707-136199617:-|nuORF 6.502698421478272 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10490 54.738 161.0 471060.0 25 0 73575.0 + -1 VSAMLILCI 9 104 518.2832040322584 1034.5518551313166 2 518.2832519412041 MULTI CID FTMS 0 0 0 10476 489652.5625 0.0881686076923534 5 -0.447906494140625 14 Carbamidomethyl (C),Oxidation (M) _VSAM(Oxidation (M))LILC(Carbamidomethyl (C))I_ REV__ENSG00000134545|ENST00000359151|KLRC1;REV__ENST00000537699.1_1_12:10603035-10603776:-|nuORF;REV__nc|ENSG00000134545|P26715-2|KLRC1 12.531546534597751 0.4974689918368763 3 [VS]V 3 -1 12.765 0.0 0.0 1.2338 0.0 0.0 0.0 746.3591115612572 746.3591115612572 0.5462187404089072 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [VS]V 1.2338 - 99 1 1.592 64265.3 1.0 5172 5316 10476 HBL1_DMSO_200M_050219_1,10490 HBL1_DMSO_200M_050219_1,10490,VSAMLILCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10491 54.741 199.0 217600.0 25 0 23281.0 -1 0 42 714.9093513870339 2855.6082996817354 4 715.1613036990166 MULTI CID FTMS 0 0 0 10476 477909.90625 0.7811067390307261 -1 0.0425453186035156 15 3 VQE 3 -1 31.427 0.0 0.0 1.1005 0.0 0.0 0.0 2496.4161732783973 2496.4161732783973 22.38560627359832 0.0 0.0 0.0 0 0.5 0.0 0.5 0.0 VQE 1.1005 - 28 + 1 1.592 41815.4 1.0 5173 5316 10476 HBL1_DMSO_200M_050219_1,10491 HBL1_DMSO_200M_050219_1,10491, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10492 54.75 464.0 362230.0 25 0 46838.0 -1 SMCAKCVRDWI 11 99 692.8145738292744 1383.6145947253488 2 692.8152953982353 MULTI CID FTMS 0 0 0 10476 458607.625 0.7062085960141301 -1 0.0425453186035156 16 Carbamidomethyl (C),Oxidation (M) _SM(Oxidation (M))CAKC(Carbamidomethyl (C))VRDWI_ ENST00000431295.1_1_1:153968319-153968433:+|nuORF 12.240655878213236 0.7805268987462184 3 [VP][HK]NVDSV 9 -1 41.811 0.0 0.0 3.0219 0.0 0.0 0.0 405.08699677569126 405.08699677569126 23.13408960324061 0.0 0.0 0.0 0 0.9247425010840048 1.0457574905606752 0.805462187404089 0.3494850021680094 [VP][HK]NVDSV 3.0219 - 767 1 1.592 121712.5 1.0 5174 5316 10476 HBL1_DMSO_200M_050219_1,10492 HBL1_DMSO_200M_050219_1,10492,SMCAKCVRDWI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10493 54.752 120.0 960330.0 25 0 78244.0 + 4142 DAPHPPLKI 9 103 329.8590105895294 986.5552023687884 3 329.8588744997978 MULTI CID FTMS 0 0 0 10476 444599.03125 0.0102815587943178 -22 2.21807861328125 17 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 19.256988751693697 0.3154191944385105 3 {[DA]|[EG]}PH{I|L} 5 4 40.59 0.0 0.0 4.1143 0.0 0.0 0.0 450.27367806963264 450.27367806963264 29.75283702469939 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {[DA]|[EG]}PH{I|L} 4.1143 - 54 + 1 1.592 97532.8 1.0 5175 5316 10476 HBL1_DMSO_200M_050219_1,10493 HBL1_DMSO_200M_050219_1,10493,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10494 54.755 139.0 660770.0 25 0 66274.0 20874 LMLRGLRR 8 126 338.88333375638865 1013.628171869366 3 338.8828307986259 MULTI CID FTMS 0 0 0 10476 422304.09375 0.0535867728050081 5 -0.447906494140625 18 Unmodified _LMLRGLRR_ ENSG00000148602|ENST00000372105|LRIT1 9.347437153973935 0.7675937258251505 3 {I|L}AV 3 7 26.198 0.0 0.0 2.5846 0.0 0.0 0.0 727.4019259551068 727.4019259551068 15.36043214641512 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AV 2.5846 - 106 + 1 1.592 81827.3 1.0 5176 5316 10476 HBL1_DMSO_200M_050219_1,10494 HBL1_DMSO_200M_050219_1,10494,LMLRGLRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10495 54.757 103.0 542790.0 25 0 97037.0 + 27811 VPRGEIEVV 9 77 499.287904622016 996.561256310832 2 499.2897521853447 MULTI CID FTMS 0 0 0 10476 412735.84375 0.2508502192013816 -4 0.3478889465332031 19 Unmodified _PLPSLSWVV_ ENSG00000241945|ENST00000291576|PWP2 18.13498045792455 0.3457906370836843 3 {I|L}EVV 4 6 34.553 0.0 0.0 3.4672 0.0 0.0 538.287401267775 0.0 538.287401267775 0.0 19.06804392152253 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}EVV 3.4672 - 117 1 1.592 47342.7 1.0 5177 5316 10476 HBL1_DMSO_200M_050219_1,10495 HBL1_DMSO_200M_050219_1,10495,PLPSLSWVV False False VPRGEIEVV 54.757045 499.289752185345 34647500.0 10476.0 ENSG00000241945|ENST00000291576|PWP2 5.008192221323649 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10496 54.763 231.0 379980.0 25 0 31246.0 14463 IFYEFRSY 8 98 562.7738323580844 1123.5331117829687 2 562.7738525271416 MULTI CID FTMS 0 0 0 10476 364188.28125 0.4947661209816472 -1 0.0425453186035156 20 Unmodified _IFYEFRSY_ ENSG00000136783|ENST00000374767|NIPSNAP3A 28.486842064014134 0.4448922141344407 3 D[PS]GVSY 7 6 48.064 0.0 0.0 4.278 0.0 0.0 400.2258473126969 0.0 400.2258473126969 0.0 31.86645088746296 0.0 0.0 0 1.0 0.0 1.3494850021680094 0.0 D[PS]GVSY 4.278 - 318 1 1.592 73709.4 1.0 5178 5316 10476 HBL1_DMSO_200M_050219_1,10496 HBL1_DMSO_200M_050219_1,10496,IFYEFRSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10498 54.773 422.0 225590.0 25 0 53191.0 + 45954 YYYDTHTNTYY 11 102 752.3067678027958 1502.5989826723917 2 752.3067504763603 MULTI CID FTMS 0 0 0 10497 390929.375 0.6266998522240091 3 -0.3227348327636719 1 Unmodified _YYYDTHTNTYY_ ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2 71.70789743142352 0.0274550572689813 3 YYYQNTYYYY 10 5 + 71.674 0.0 0.0 4.77 4.77 81.415 0.0 0.0 0.0 7.226339225338137 8.947340481202062 7.226339225338137 7.226339225338137 0 1.298455006504028 2.0 1.424742501084005 0.3807196863200844 YYYQNTYYYY;[NP]DYQNTYYYY;YYYQGGTYYYY;[YT][HD]TNTYYYY;[NP]DYQGGTYYYY;[YT][HS]ENTYYYY;YY{I|L}D{[YD]|[{M(Oxidation (M))|F}M]}YYYY;[NP][YN]ENTYYYY;YYYD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MYYY;YYYQN[DP]NTYY 4.77;4.2891;4.1601;3.9428;3.6816;3.6253;3.5883;3.5726;3.5335;3.3824 -;-;-;-;-;-;-;-;-;- 2513 1 1.58 70517.1 1.0 5179 5317 10497 HBL1_DMSO_200M_050219_1,10498 HBL1_DMSO_200M_050219_1,10498,YYYDTHTNTYY True True YYYDTHTNTYY 54.773352 752.30675047636 14023576.0 10497.0 ENSG00000064651|ENST00000262461|SLC12A2;;nc|ENSG00000064651|P55011-3|SLC12A2 7.623662948608398 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10499 54.775 50.0 1153100.0 25 0 134430.0 + 14938 ILMEHIHKL 9 77 567.3288778843483 1132.6432028354966 2 567.3293334841728 MULTI CID FTMS 0 0 0 10497 1484228.375 0.4567687506227094 -3 0.2563705444335937 2 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 61.08992128646608 0.0254786290039527 3 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 86.288 0.0 0.0 7.6183 7.6183 97.02 0.0 0.0 0.0 64.56198990676192 12.082655352276674 12.082655352276674 86.28829717622367 0 1.6549471895720984 2.0 0.4247425010840047 0.3252574989159953 + + {I|L}{I|L}MEH{I|L}HK{I|L} 7.6183 + + 393 + 1 1.58 51433.9 1.0 5180 5317 10497 HBL1_DMSO_200M_050219_1,10499 HBL1_DMSO_200M_050219_1,10499,ILMEHIHKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10500 54.776 59.0 1589600.0 25 0 200320.0 + 21155 LPASLRTV 8 89 428.766243253084 855.5179335729681 2 428.7663146853447 MULTI CID FTMS 0 0 0 10497 1429394.875 1.0 0 0.0 3 Unmodified _LPASLRTV_ ENSG00000117616|ENST00000243189|RSRP1;nc|ENSG00000117616|Q9BUV0-2|RSRP1;nc|ENSG00000117616|Q9BUV0-3|RSRP1 34.40172386719151 0.3279500639400574 3 {I|L}PAS{I|L}RTV 8 0 + 63.16 0.0 0.0 7.3827 7.3827 96.097 0.0 0.0 0.0 41.98915256758788 2.995039633316736 2.995039633316736 54.71453313800403 0 0.6989700043360187 1.3979400086720375 0.4247425010840047 0.0 + + {I|L}PAS{I|L}RTV;{I|L}[WK]{[TV]|[{I|L}S]}P{I|L};{I|L}[WK][{I|L}P]TV 7.3827;0.98718;0.64872 +;-;- + 72 + 1 1.58 80608.8 1.0 5181 5317 10497 HBL1_DMSO_200M_050219_1,10500 HBL1_DMSO_200M_050219_1,10500,LPASLRTV False True LPASLRTV 54.776135 428.766314685345 6937170.5 10497.0 ENSG00000117616|ENST00000243189|RSRP1;;nc|ENSG00000117616|Q9BUV0-3|RSRP1;;nc|ENSG00000117616|Q9BUV0-2|RSRP1 2.0080426732699075 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10501 54.778 92.0 514870.0 25 0 68136.0 + + 35184 GVKEKFTMV 9 86 518.2832040322584 1034.5518551313166 2 519.7863036990166 MULTI CID FTMS 0 0 0 10497 1022310.1875 1.0 0 0.0 4 Unmodified _SSARTTVKW_ nc|ENSG00000114573|P38606-2|ATP6V1A;ENSG00000114573|ENST00000273398|ATP6V1A 13.90604991867851 0.4602628045680013 3 [VG]T{M(Oxidation (M))|F}KTM 7 -1 41.687 0.0 0.0 4.0295 0.0 0.0 0.0 267.13825038813485 267.13825038813485 27.08297602838357 0.0 0.0 0.0 0 0.0 2.0 1.075257498915995 0.0 [VG]T{M(Oxidation (M))|F}KTM 4.0295 - 487 1 1.58 43799.3 1.0 5182 5317 10497 HBL1_DMSO_200M_050219_1,10501 HBL1_DMSO_200M_050219_1,10501,SSARTTVKW False False GVKEKFTMV 54.778162 519.786303699017 4595365.5 10497.0 nc|ENSG00000114573|P38606-2|ATP6V1A;;ENSG00000114573|ENST00000273398|ATP6V1A 5.463141918182373 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10502 54.785 366.0 178890.0 25 0 40460.0 -1 0 40 1076.109321038839 3225.3061337167173 3 1076.444506824017 MULTI CID FTMS 0 0 0 10497 821682.1875 1.0 0 0.0 5 3 {I|L}S 2 -1 8.4434 0.0 0.0 0.26178 0.0 0.0 2467.906610866911 554.2579439752561 3022.164554842167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}S 0.26178 - 41 + 1 1.58 65309.7 1.0 5183 5317 10497 HBL1_DMSO_200M_050219_1,10502 HBL1_DMSO_200M_050219_1,10502, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10503 54.787 101.0 463720.0 25 0 38935.0 + 22079 LPPPTPSQI 9 89 475.271559301882 948.528565670564 2 475.2714416384697 MULTI CID FTMS 0 0 0 10497 646607.4375 0.2374954099654917 -12 0.9993972778320312 6 Unmodified _LPPPTPSQI_ ENSG00000083223|ENST00000375963|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 26.88365393820708 0.1891292719743517 3 [{I|L}P]P 3 6 29.309 0.0 0.0 3.09 0.0 0.0 0.0 638.3169622372234 638.3169622372234 13.824543621168388 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}P]P 3.09 + + 102 1 1.58 41277.5 1.0 5184 5317 10497 HBL1_DMSO_200M_050219_1,10503 HBL1_DMSO_200M_050219_1,10503,LPPPTPSQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10504 54.794 367.0 328400.0 25 0 19334.0 + 26236 NQIYYYHNV 9 149 607.2851995473729 1212.5558461615458 2 607.2856323122978 MULTI CID FTMS 0 0 0 10497 555986.5625 1.0 0 0.0 7 Unmodified _NQIYYYHNV_ ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-3|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2 71.13359017698441 0.0206607516130725 3 GGQ{I|L}DHSY{I|L}[HS] 11 8 + 66.279 0.0 0.0 5.466 5.466 84.684 0.0 0.0 0.0 8.495401426137505 7.367585652254178 7.367585652254178 8.495401426137505 0 0.0 1.3010299956639813 0.3054621874040891 1.805462187404089 GGQ{I|L}DHSY{I|L}[HS];{[QN]|[E{I|L}]|[KN]}{I|L}DHSY{I|L}[HS];GGQ{I|L}DQC(Carbamidomethyl (C))V{I|L}[HS];{[QN]|[E{I|L}]|[KN]}{I|L}YYYH{[NV]|[RG]};{[QG]|[NA]}G{I|L}DHSY{I|L}[HS];GGWYY[KC]{I|L}[HS];{[QN]|[E{I|L}]|[KN]}{I|L}DQC(Carbamidomethyl (C))V{I|L}[HS];GGQ{I|L}D[AG]C(Carbamidomethyl (C))V{I|L}[HS];GGQ{I|L}DQ[CG]V{I|L}[HS];GGAG{I|L}DQC(Carbamidomethyl (C))V{I|L}[HS] 5.466;4.7654;4.6171;4.6045;4.4409;4.1396;3.9165;3.8643;3.8643;3.8469 -;-;-;+;-;-;-;-;-;- + 1807 1 1.58 91359.7 1.0 5185 5317 10497 HBL1_DMSO_200M_050219_1,10504 HBL1_DMSO_200M_050219_1,10504,NQIYYYHNV True True NQIYYYHNV 54.793564 607.285632312298 2493491.75 10497.0 nc|ENSG00000024048|Q8IWV8-3|UBR2;;nc|ENSG00000024048|Q8IWV8|UBR2;;ENSG00000024048|ENST00000372901|UBR2 9.122348467508951 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10505 54.801 408.0 269260.0 25 0 18664.0 + 24222 MALCEAKL 8 129 439.7272633067152 877.4399736802303 2 439.7277709841728 MULTI CID FTMS 0 0 0 10497 504658.4375 1.0 0 0.0 8 Unmodified _MALCEAKL_ REV__ENSG00000168259|ENST00000457167|DNAJC7;REV__ENST00000403909.2_1_6:139659748-139659847:+|nuORF;REV__nc|ENSG00000168259|Q99615-2|DNAJC7 23.1484247019978 0.5573009939494978 3 {[DS]|[MA]|[CV]|TT}PSTMK{I|L} 8 -1 + 59.747 0.0 0.0 6.8092 6.8092 92.48 0.0 0.0 0.0 20.823623869352787 12.5190243216651 12.5190243216651 14.943415770716156 0 0.4247425010840047 2.0 0.0 0.2134679910804404 {[DS]|[MA]|[CV]|TT}PSTMK{I|L};{[DS]|[MA]|[CV]|TT}{I|L}[DG]MK{I|L};{[DS]|[MA]|[CV]|TT}[VS]DDK{I|L};{[DS]|[MA]|[CV]|TT}{[RE]|[WV]}MK{I|L};{[DS]|[MA]|[CV]|TT}PST[KP]{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}{I|L}[DG][KP]{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}[HV][NP]P{I|L};{[DS]|[MA]|[CV]|TT}[HV]V[QP]P;{[DS]|[MA]|[CV]|TT}{[RE]|[WV]}[KP]{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}[HV][NP]{I|L}P 6.8092;5.1062;4.452;4.2848;3.9755;2.2724;2.2346;1.8947;1.4511;1.4218 -;-;-;-;-;-;-;-;-;- 282 + 1 1.58 89884.2 1.0 5186 5317 10497 HBL1_DMSO_200M_050219_1,10505 HBL1_DMSO_200M_050219_1,10505,MALCEAKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10506 54.809 462.0 403100.0 25 0 48614.0 + 33468 SIGKETIV 8 155 423.7502817173978 845.4860105015956 2 423.7506896853447 MULTI CID FTMS 0 0 0 10497 431635.25 1.0 0 0.0 9 Unmodified _SIGKETIV_ REV__ENSG00000163468|ENST00000295688|CCT3;REV__nc|ENSG00000163468|P49368-2|CCT3 36.04419817259434 0.3004715606373109 3 H{M(Oxidation (M))|F}{I|L}TV 5 -1 19.096 0.0 0.0 2.2586 0.0 0.0 230.1607877688416 0.0 230.1607877688416 0.0 4.947611269970984 0.0 0.0 0 0.5796896906561032 0.0 0.6643943297944485 0.0 H{M(Oxidation (M))|F}{I|L}TV 2.2586 - 932 + 1 1.58 145677.3 1.0 5187 5317 10497 HBL1_DMSO_200M_050219_1,10506 HBL1_DMSO_200M_050219_1,10506,SIGKETIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10507 54.819 565.0 664070.0 25 0 21563.0 + 36506 TAFAHLREV 9 280 348.5263944403463 1042.557353921239 3 348.5254089236259 MULTI CID FTMS 0 0 0 10497 373941.78125 1.0 0 0.0 10 Unmodified _TAFAHLREV_ ENSG00000169660|ENST00000327949|HEXD;nc|ENSG00000169660|Q8WVB3-2|HEXD 17.44264345198275 0.3645313841742926 3 TA{M(Oxidation (M))|F}AH{I|L} 6 3 65.092 0.0 0.0 6.2435 0.0 0.0 0.0 399.2027040328189 399.2027040328189 50.03070930714168 0.0 0.0 0.0 0 0.3945990182825422 1.6989700043360187 0.0 0.0 + TA{M(Oxidation (M))|F}AH{I|L} 6.2435 + + 2107 + 1 1.58 298684.0 1.0 5188 5317 10497 HBL1_DMSO_200M_050219_1,10507 HBL1_DMSO_200M_050219_1,10507,TAFAHLREV False True TAFAHLREV 54.818926 348.525408923626 1414470.125 10497.0 ENSG00000169660|ENST00000327949|HEXD;;nc|ENSG00000169660|Q8WVB3-2|HEXD 4.902369340260823 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10508 54.829 549.0 211650.0 25 0 26366.0 -1 0 108 925.428061669379 1848.8415704055576 2 925.9332763552666 MULTI CID FTMS 0 0 0 10497 286069.65625 0.658820109617324 -3 0.2563705444335937 11 3 {[QS]|[NT]}{I|L}PC(Carbamidomethyl (C))[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 55.435 0.0 0.0 2.9984 2.9984 70.304 0.0 0.0 0.0 2.036567676338024 2.036567676338024 2.036567676338024 2.036567676338024 0 0.805462187404089 0.0 0.25 0.6109243748081782 {[QS]|[NT]}{I|L}PC(Carbamidomethyl (C))[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEAQ[KT][MD]{I|L}SQ;[NP]{I|L}TC(Carbamidomethyl (C))[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}{I|L}PC(Carbamidomethyl (C))[HV]QAEN{I|L}DV[HC];[QP]VTC(Carbamidomethyl (C))[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]SPC(Carbamidomethyl (C))[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}TC(Carbamidomethyl (C))[HV]QAEN{I|L}DV[HC];[{I|L}P]NTC(Carbamidomethyl (C))[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};EEVD{I|L}NEAQ[KT][MD]{I|L}SQ 2.9984;2.8882;2.8738;2.8258;2.7244;2.7148;2.711;2.7012;2.6862;2.6232 -;-;-;-;-;-;-;-;-;- 6987 1 1.58 81572.0 1.0 5189 5317 10497 HBL1_DMSO_200M_050219_1,10508 HBL1_DMSO_200M_050219_1,10508, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10509 54.838 490.0 260560.0 25 0 15751.0 + 38716 TTVKKFFSA 9 178 514.792903778003 1027.571254622806 2 514.7932006716728 MULTI CID FTMS 0 0 0 10497 288302.15625 1.0 0 0.0 12 Unmodified _TTVKKFFSA_ ENSG00000154710|ENST00000284957|RABGEF1;nc|ENSG00000154710|Q9UJ41-3|RABGEF1;nc|ENSG00000154710|Q9UJ41-4|RABGEF1 32.78568957990786 0.1150597335874693 3 TTVK[SG][HV]S{I|L} 10 5 + 50.038 0.0 0.0 4.8696 4.8696 78.979 0.0 0.0 0.0 31.80697041586157 0.7371190202726225 0.7371190202726225 4.522976709946299 0 0.3494850021680094 1.3010299956639813 0.2396518287104437 0.3054621874040891 TTVK[SG][HV]S{I|L};TTVK[SG][HV]TV;TTVKE[KS]HV;TTVKE[KS]VH;TTVK[SG]{[TV]|[{I|L}S]}HV;{[DA]|[EG]}R[KQ]KVSP;TTVA[VS][KS]HV;TTVK[SG]{[TV]|[{I|L}S]}VH;TTVA[VS][KS]VH;[VG]W[TA][{I|L}V]VSP 4.8696;4.4294;3.9573;3.4847;3.146;2.9413;2.7172;2.6734;2.2447;2.0196 -;-;-;-;-;-;-;-;-;- 1081 + 1 1.58 100278.7 1.0 5190 5317 10497 HBL1_DMSO_200M_050219_1,10509 HBL1_DMSO_200M_050219_1,10509,TTVKKFFSA True True TTVKKFFSA 54.838439 514.793200671673 2304446.75 10497.0 nc|ENSG00000154710|Q9UJ41-3|RABGEF1;;nc|ENSG00000154710|Q9UJ41-4|RABGEF1;;ENSG00000154710|ENST00000284957|RABGEF1 4.804019451141357 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10510 54.848 565.0 522060.0 25 0 64745.0 + 21842 LPPATQVV 8 258 412.7479207570165 823.481288580833 2 412.7479736208916 MULTI CID FTMS 0 0 0 10497 278844.15625 0.4082668354575867 6 -0.5695114135742188 13 Unmodified _LPPATQVV_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 34.18733598223924 0.3315367612694167 3 [{I|L}P][PA]TQVV 8 0 + 19.922 0.0 0.0 2.4192 2.4192 71.967 0.0 0.0 0.0 3.5685328122897 4.61664837570644 3.5685328122897 3.5685328122897 0 0.5484550065040281 1.5228787452803376 0.2887254899964357 0.0 + + [{I|L}P][PA]TQVV;{[HG]|PP}ATQ{I|L}VV;[TP]PAQ{I|L}VV;{[HG]|PP}TAQ{I|L}VV;{[HG]|PP}AT{I|L}QVV;{[HG]|PP}TA{I|L}QVV;[TP]PA{I|L}QVV;{[HG]|PP}A{I|L}TQVV;[{I|L}P][PA]TN{I|L}V;[PA]PTQ{I|L}VV 2.4192;1.9859;1.8682;1.8682;1.8518;1.7341;1.7341;1.4808;1.3876;1.347 +;-;-;-;-;-;-;-;-;- + 576 1 1.58 227138.2 1.0 5191 5317 10497 HBL1_DMSO_200M_050219_1,10510 HBL1_DMSO_200M_050219_1,10510,LPPATQVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10511 54.861 719.0 45214.0 25 0 10965.0 -1 0 30 1171.803637683392 0 1171.803637683392 PEAK CID FTMS 0 0 0 -1 0 14 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.58 34383.9 1.0 5192 5317 10497 HBL1_DMSO_200M_050219_1,10511 HBL1_DMSO_200M_050219_1,10511, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10512 54.872 568.0 272630.0 25 0 21072.0 + 19093 LDRYFCPDFSS 11 151 675.2966734829922 1348.5787940327843 2 675.2968017458916 MULTI CID FTMS 0 0 0 10497 165255.421875 0.4234657597365501 -3 0.2563705444335937 15 Unmodified _LDRYFCPDFSS_ REV__ENSG00000179913|ENST00000318683|B3GNT3 8.155526934196011 0.8366696279279818 3 [PS]{I|L}CDEAQQNA 11 -1 64.951 0.0 0.0 4.8162 0.0 0.0 0.0 189.06186554885252 189.06186554885252 48.02555329489414 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.1861818737241735 1.274227503252014 [PS]{I|L}CDEAQQNA 4.8162 - 2636 1 1.58 113685.3 1.0 5193 5317 10497 HBL1_DMSO_200M_050219_1,10512 HBL1_DMSO_200M_050219_1,10512,LDRYFCPDFSS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10513 54.88 473.0 401770.0 25 0 42794.0 24004 LVWLLLQTQ 9 192 557.3387099420348 0 557.3379394412041 PEAK CID FTMS 0 0 0 10497 157671.0 1.0 0 0.0 16 Unmodified _LVWLLLQTQ_ ENST00000380637.7_1_21:40834409-40883616:+|nuORF;ENST00000458295.5_2_21:40834466-40883616:+|nuORF 21.53697664764585 0.1871382778112851 3 GWAK 4 8 24.285 0.0 0.0 2.1826 0.0 0.0 113.08167516624856 554.3190468081762 667.4007219744248 0.0 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.0 GWAK 2.1826 - 2120 + 1 1.58 145855.4 1.0 5194 5317 10497 HBL1_DMSO_200M_050219_1,10513 HBL1_DMSO_200M_050219_1,10513,LVWLLLQTQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10514 54.889 482.0 169090.0 25 0 11640.0 + -1 FTCGGASFQGQ 11 150 580.2435989286915 1158.472644924183 2 580.2427245974541 MULTI CID FTMS 0 0 0 10497 142183.203125 1.0 0 0.0 17 Carbamidomethyl (C) _FTC(Carbamidomethyl (C))GGASFQGQ_ REV__ENSG00000152894|ENST00000368226|PTPRK;REV__ENST00000524481.5_1_6:128321419-128841710:-|nuORF;REV__ENST00000524534.5_1_6:128384662-128841530:-|nuORF;REV__nc|ENSG00000152894|Q15262-3|PTPRK;REV__nc|ENSG00000152894|Q15262-4|PTPRK;REV__nc|ENSG00000152894|Q15262|PTPRK 8.745405648335112 0.8338865417133445 3 {[QS]|[NT]}{I|L} 3 -1 13.157 0.0 0.0 1.1357 0.0 0.0 0.0 827.2723635123267 827.2723635123267 1.374529972310878 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4204841662593096 {[QS]|[NT]}{I|L} 1.1357 - 270 1 1.58 66255.4 1.0 5195 5317 10497 HBL1_DMSO_200M_050219_1,10514 HBL1_DMSO_200M_050219_1,10514,FTCGGASFQGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10515 54.898 487.0 109240.0 25 0 12889.0 + -1 SLALSLLRCH 10 75 585.3247558474541 0 585.3247558474541 PEAK CID FTMS 0 0 0 -1 0 18 Carbamidomethyl (C) _SLALSLLRC(Carbamidomethyl (C))H_ REV__ENST00000327574.4_1_21:45148845-45152249:+|nuORF 5.731851221503515 0.3961065659209837 3 {I|L}AD 3 -1 8.4164 0.0 0.0 0.72019 0.0 0.0 784.396355101355 82.06707941226796 866.4634345136229 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AD 0.72019 - 21 + 1 1.58 47133.5 1.0 5196 5317 10497 HBL1_DMSO_200M_050219_1,10515 HBL1_DMSO_200M_050219_1,10515,SLALSLLRCH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10517 54.902 4.3 7248000.0 25 0 985440.0 38636 TTIKAFFPKK 10 56 394.2412955003985 1179.7020571013954 3 394.2414123415947 MULTI CID FTMS 0 0 0 10516 7259549.5 0.2446056557145718 1 -0.1197128295898437 1 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 32.78568957990786 0.2337485590374503 3 TT{I|L}KY{I|L}WKK 9 4 + 84.844 0.0 0.0 7.192 7.192 95.926 0.0 0.0 0.0 77.85457533920862 17.230749808046326 17.230749808046326 84.84427538256881 0 0.3252574989159953 1.3979400086720375 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK 7.192 - 58 + 1 1.572 33767.9 1.0 5197 5318 10516 HBL1_DMSO_200M_050219_1,10517 HBL1_DMSO_200M_050219_1,10517,TTIKAFFPKK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10518 54.903 19.0 1976400.0 25 0 123230.0 781 AESKALPGPA 10 90 470.7592986894834 939.5040444457668 2 470.7599670290947 MULTI CID FTMS 0 0 0 10516 1018971.25 0.1877476982984401 1 -0.1197128295898437 2 Unmodified _AESKALPGPA_ ENSG00000189167|ENST00000533490|ZAR1L 10.823927491677226 0.6659270209832991 3 [VG]{I|L}N 4 9 15.424 0.0 0.0 1.6417 0.0 0.0 0.0 553.270681979223 553.270681979223 0.5091523848706405 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VG]{I|L}N 1.6417 - 155 1 1.572 35062.6 1.0 5198 5318 10516 HBL1_DMSO_200M_050219_1,10518 HBL1_DMSO_200M_050219_1,10518,AESKALPGPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10519 54.904 11.0 5029200.0 25 0 1173800.0 + 5088 DGYVVKETI 9 79 512.2705667185701 1022.5265805039402 2 512.2715942263603 MULTI CID FTMS 0 0 0 10516 4536681.0 0.937612843863774 1 -0.1197128295898437 3 Unmodified _DGYVVKETI_ ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1;nc|ENSG00000117676|Q15418-3|RPS6KA1;nc|ENSG00000117676|Q15418-4|RPS6KA1 57.72198328787511 0.0273433238377839 3 [YV]{[QV]|[N{I|L}]|[RA]|[KV]}VV 6 5 37.821 0.0 0.0 3.6988 0.0 0.0 0.0 332.0843497538986 332.0843497538986 15.20390571308305 0.0 0.0 0.0 0 1.2134679910804405 2.0 0.0 0.0 [YV]{[QV]|[N{I|L}]|[RA]|[KV]}VV 3.6988 - 305 1 1.572 45020.5 1.0 5199 5318 10516 HBL1_DMSO_200M_050219_1,10519 HBL1_DMSO_200M_050219_1,10519,DGYVVKETI True True DGYVVKETI 54.90414 512.27159422636 48260044.0 10516.0 nc|ENSG00000117676|Q15418-3|RPS6KA1;;nc|ENSG00000117676|Q15418-4|RPS6KA1;;nc|ENSG00000117676|Q15418-2|RPS6KA1;;ENSG00000117676|ENST00000374168|RPS6KA1 6.489935557047526 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10520 54.905 14.0 6456900.0 25 0 404930.0 + 4957 DGPRVFRV 8 110 315.84712001612127 944.519530648564 3 315.8469116091728 MULTI CID FTMS 0 0 0 10516 3767649.5 0.1621958566296319 -2 0.1884078979492187 4 Unmodified _DGPRVFRV_ ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF;nc|ENSG00000179115|Q9Y285-2|FARSA 36.04419817259434 0.3004715606373109 3 DGVPR{M(Oxidation (M))|F}VR 8 4 + 86.077 0.0 0.0 9.1133 9.1133 87.485 0.0 0.0 0.0 30.0 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.2742275032520141 2.0 0.0 0.6861818737241735 DGVPR{M(Oxidation (M))|F}VR;DGVPR{M(Oxidation (M))|F}RV;DGVPRV{M(Oxidation (M))|F}R;DG[RP]V{M(Oxidation (M))|F}VR;DG[RP]V{M(Oxidation (M))|F}RV;DG[RP]VV{M(Oxidation (M))|F}R;DRPGV{M(Oxidation (M))|F}VR;DVGPR{M(Oxidation (M))|F}VR;DRPGV{M(Oxidation (M))|F}RV;DVGPR{M(Oxidation (M))|F}RV 9.1133;8.7946;8.4712;7.4468;7.1281;6.8047;6.3024;5.9837;5.9837;5.665 -;-;-;-;+;-;-;-;-;- + 343 + 1 1.572 80874.1 1.0 5200 5318 10516 HBL1_DMSO_200M_050219_1,10520 HBL1_DMSO_200M_050219_1,10520,DGPRVFRV False True DGPRVFRV 54.905319 315.846911609173 302332896.0 10516.0 ENST00000592662.5_1_19:13039347-13044510:-|nuORF;;ENSG00000179115|ENST00000314606|FARSA;;nc|ENSG00000179115|Q9Y285-2|FARSA 4.195851524670919 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10521 54.906 18.0 2859900.0 25 0 404480.0 22144 LPPRPSASL 9 69 469.276764901342 936.538976869484 2 469.2769653201103 MULTI CID FTMS 0 0 0 10516 2885462.75 0.1613214964521671 -3 0.2309532165527343 5 Unmodified _LPPRPSASL_ ENSG00000144331|ENST00000410066|ZNF385B;nc|ENSG00000144331|Q569K4-2|ZNF385B;nc|ENSG00000144331|Q569K4-3|ZNF385B;nc|ENSG00000144331|Q569K4|ZNF385B 24.020572477871973 0.2255576514309169 3 {I|L}PPE 4 6 53.175 0.0 0.0 5.6779 0.0 0.0 0.0 497.2847900174551 497.2847900174551 41.3925886967923 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPE 5.6779 - 46 + 1 1.572 44295.9 1.0 5201 5318 10516 HBL1_DMSO_200M_050219_1,10521 HBL1_DMSO_200M_050219_1,10521,LPPRPSASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10522 54.908 17.0 3490600.0 25 0 499600.0 + 6364 DVSIGTLALG 10 63 473.267010056436 944.519467179672 2 473.2672302126884 MULTI CID FTMS 0 0 0 10516 1905479.5 0.1056935401277011 -2 0.1884078979492187 6 Unmodified _DVSIGTLALG_ REV__ENST00000264951.8_1_3:142151730-142166889:-|nuORF 8.745405648335112 0.6861838735306406 3 DVS 3 -1 26.198 0.0 0.0 2.7737 0.0 0.0 0.0 640.3679639600464 640.3679639600464 14.93882771791494 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DVS 2.7737 + + 31 + 1 1.572 49775.8 1.0 5202 5318 10516 HBL1_DMSO_200M_050219_1,10522 HBL1_DMSO_200M_050219_1,10522,DVSIGTLALG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10523 54.909 46.0 1048100.0 25 0 100910.0 + 36173 SVVPDVRSV 9 61 479.27178049125456 956.5290080493093 2 479.2719299197197 MULTI CID FTMS 0 0 0 10516 951999.0625 0.0403648897405662 -4 0.3914337158203125 7 Unmodified _SVVPDVRSV_ chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1;ENSG00000073584|ENST00000348513|SMARCE1;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;nc|ENSG00000073584|Q969G3-2|SMARCE1;nc|ENSG00000073584|Q969G3-3|SMARCE1;nc|ENSG00000073584|Q969G3-4|SMARCE1;nc|ENSG00000073584|Q969G3-5|SMARCE1;nc|ENSG00000073584|Q969G3-6|SMARCE1 18.373094154950223 0.3393451798331396 3 [VS]VPDV 6 3 55.406 0.0 0.0 5.7924 0.0 0.0 0.0 357.18992029361567 357.18992029361567 43.62333850483863 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + [VS]VPDV 5.7924 + + 29 + 1 1.572 42960.0 1.0 5203 5318 10516 HBL1_DMSO_200M_050219_1,10523 HBL1_DMSO_200M_050219_1,10523,SVVPDVRSV False True SVVPDVRSV 54.908926 479.27192991972 453544416.0 10516.0 nc|ENSG00000073584|Q969G3-6|SMARCE1;;nc|ENSG00000073584|Q969G3-2|SMARCE1;;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;;nc|ENSG00000073584|Q969G3-3|SMARCE1;;nc|ENSG00000073584|Q969G3-4|SMARCE1;;ENSG00000073584|ENST00000348513|SMARCE1;;nc|ENSG00000073584|Q969G3-5|SMARCE1;;chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1 6.38595724105835 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10524 54.915 341.0 181550.0 25 0 21208.0 -1 0 77 593.0028857270995 1775.9868277814985 3 593.3376953005791 MULTI CID FTMS 0 0 0 10516 665783.875 1.0 0 0.0 8 3 [HA]VGD{I|L} 6 -1 28.359 0.0 0.0 1.5968 0.0 0.0 0.0 1180.6668948994911 1180.6668948994911 17.76327810603134 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.7614393726401688 0.0 [HA]VGD{I|L} 1.5968 - 149 1 1.572 52567.4 1.0 5204 5318 10516 HBL1_DMSO_200M_050219_1,10524 HBL1_DMSO_200M_050219_1,10524, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10525 54.918 162.0 658820.0 25 0 107380.0 + 45811 YYNLQGISH 9 104 547.7663823277076 1093.518211722215 2 547.7673217654228 MULTI CID FTMS 0 0 0 10516 506695.0 0.5160637831899628 -2 0.1884078979492187 9 Unmodified _YYNLQGISH_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 78.7280429016045 0.0178249292250809 3 YYN{I|L}QG{I|L}SH 9 0 + 108.17 0.0 0.0 9.8921 9.8921 94.964 0.0 0.0 0.0 88.78653141768609 14.09256854528806 14.09256854528806 9.208187539523747 0 0.8494850021680094 2.0 1.086696871556164 0.9247425010840048 + + YYN{I|L}QG{I|L}SH;YYGG{I|L}QG{I|L}SH;YYN{I|L}[AG]G{I|L}SH;YYGG{I|L}[AG]G{I|L}SH;YYN{I|L}QG[HS]{I|L};YYNN[{I|L}A]{I|L}SH;YYGG{I|L}QG[HS]{I|L};YYNGG[{I|L}A]{I|L}SH;YYGGN[{I|L}A]{I|L}SH;YYN{I|L}[{I|L}T][NG]H 9.8921;9.05;8.5928;7.3663;7.2319;7.0746;6.3898;6.2325;6.2325;5.9792 +;-;-;-;-;-;-;-;-;- + 610 + 1 1.572 84346.4 1.0 5205 5318 10516 HBL1_DMSO_200M_050219_1,10525 HBL1_DMSO_200M_050219_1,10525,YYNLQGISH True True YYNLQGISH 54.918315 547.767321765423 7342452.0 10516.0 ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 7.654447396596272 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10526 54.921 140.0 517530.0 25 0 46554.0 + 45791 YYLNEQGDRVY 11 82 710.3302594086914 1418.6459658841827 2 710.3311035037041 MULTI CID FTMS 0 0 0 10516 452289.71875 0.1204496067522553 1 -0.1197128295898437 10 Unmodified _YYLNEQGDRVY_ ENSG00000182117|ENST00000328848|NOP10 42.312485326615175 0.1767732348921932 3 YY{I|L}NEQ[DG][RV]Y 11 0 + 87.779 0.0 0.0 6.1875 6.1875 92.882 0.0 0.0 0.0 49.696607696568655 7.82516055786094 7.82516055786094 71.35992191423391 0 0.7742275032520141 2.0 0.0 0.805462187404089 + + YY{I|L}NEQ[DG][RV]Y;Y[RH][{I|L}A]QAED[WM];Y[RH][KS]PAED[WM];Y[RH][RN]{I|L}ED[WM] 6.1875;1.1574;0.77385;0.62552 +;-;-;- + 682 + 1 1.572 55938.2 1.0 5206 5318 10516 HBL1_DMSO_200M_050219_1,10526 HBL1_DMSO_200M_050219_1,10526,YYLNEQGDRVY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10527 54.925 181.0 600600.0 25 0 44284.0 -1 ALQFMKHWI 9 111 397.21070290528456 1188.6102793160535 3 397.2107421755791 MULTI CID FTMS 0 0 0 10516 399574.3125 1.0 0 0.0 11 Oxidation (M) _ALQFM(Oxidation (M))KHWI_ ENST00000432673.1_1_6:139013686-139015644:+|nuORF 13.042465956692816 0.4836390050082244 3 {I|L}A{I|L} 3 -1 45.049 0.0 0.0 3.7901 0.0 0.0 0.0 888.3845768473318 888.3845768473318 30.445312593723983 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}A{I|L} 3.7901 - 71 + 1 1.572 90895.8 1.0 5207 5318 10516 HBL1_DMSO_200M_050219_1,10527 HBL1_DMSO_200M_050219_1,10527,ALQFMKHWI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10528 54.933 478.0 261110.0 25 0 19376.0 -1 0 116 628.9217121804934 3139.572178569467 5 629.3232299685478 MULTI CID FTMS 0 0 0 10516 372484.6875 0.2474107155162951 -1 0.1350631713867187 12 3 H{M(Oxidation (M))|F}{M(Oxidation (M))|F}D[DV]{I|L}SA{I|L}SD[H{I|L}]A[HK] 17 -1 83.641 0.0 0.0 2.6641 0.0 0.0 1188.6354411951534 0.0 1188.6354411951534 0.0 47.0719873598359 0.0 0.0 0 0.9247425010840048 0.0 1.2614393726401687 1.079689690656103 H{M(Oxidation (M))|F}{M(Oxidation (M))|F}D[DV]{I|L}SA{I|L}SD[H{I|L}]A[HK] 2.6641 - 9181 + 1 1.572 98413.5 1.0 5208 5318 10516 HBL1_DMSO_200M_050219_1,10528 HBL1_DMSO_200M_050219_1,10528, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10529 54.935 101.0 667050.0 25 0 42612.0 -1 FPVPLPSML 9 96 508.7786536302368 1015.5427543272737 2 508.7780944705009 MULTI CID FTMS 0 0 0 10516 391221.46875 0.2986569049311469 7 -0.6524162292480469 13 Oxidation (M) _FPVPLPSM(Oxidation (M))L_ ENST00000408938.2_3_7:99146127-99156118:-|nuORF 32.116972079565 0.1225432171549407 3 GTPE 4 -1 40.182 0.0 0.0 3.9567 0.0 0.0 613.3567982404312 0.0 613.3567982404312 0.0 23.349373760952314 0.0 0.0 0 0.3054621874040891 0.0 0.6694451763165201 0.0 GTPE 3.9567 - 262 1 1.572 60784.6 1.0 5209 5318 10516 HBL1_DMSO_200M_050219_1,10529 HBL1_DMSO_200M_050219_1,10529,FPVPLPSML False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10530 54.945 573.0 277940.0 25 0 15862.0 + 32194 RVVDELDNQM 10 152 609.7927567054711 1217.570960477742 2 609.7925292849541 MULTI CID FTMS 0 0 0 10516 235314.0625 1.0 0 0.0 14 Unmodified _RVVDELDNQM_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 80.6760300276096 0.0165137828474802 3 [RV]VDE{I|L}DNQM 10 0 + 92.047 0.0 0.0 7.5599 7.5599 91.793 0.0 0.0 0.0 11.003297252732096 65.50493047821064 11.003297252732096 9.164539485499262 0 1.0941876774005248 0.7958800173440752 1.0138793319624575 0.7302046884880937 + + [RV]VDE{I|L}DNQM;[RV]VDE{I|L}DGGQM;[RV]VDE{I|L}DN[AG]M;{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]E{I|L}DNQM;[RV]VDE{I|L}DGG[AG]M;GGE{I|L}{I|L}E{I|L}DNQM;[AG]D{I|L}{I|L}E{I|L}DNQM;GGA[RK]E{I|L}DNQM;[AG]G[RK]E{I|L}DNQM;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}E{I|L}DNQM 7.5599;6.8072;6.8072;6.1775;6.0575;6.0288;5.8786;5.7443;5.594;5.5062 +;-;-;-;-;-;-;-;-;- + 1507 1 1.572 121104.5 1.0 5210 5318 10516 HBL1_DMSO_200M_050219_1,10530 HBL1_DMSO_200M_050219_1,10530,RVVDELDNQM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10531 54.959 781.0 189370.0 25 0 41637.0 -1 0 49 1123.7831953727498 3368.3277567184496 3 1124.115405261517 MULTI CID FTMS 0 0 0 10516 204406.578125 0.3157540451305987 -2 0.1884078979492187 15 3 GM 2 -1 7.9588 0.0 0.0 0.23628 0.0 0.0 1945.680867968452 1231.5984591119752 3177.279327080428 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GM 0.23628 - 10 + 1 1.572 123758.2 1.0 5211 5318 10516 HBL1_DMSO_200M_050219_1,10531 HBL1_DMSO_200M_050219_1,10531, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10532 54.972 755.0 454340.0 25 0 52056.0 + 18475 KYKDIQDKL 9 322 384.2214622109715 0 384.2202026247978 PEAK CID FTMS 0 0 0 10516 207827.375 0.4298586777536844 5 -0.4344482421875 16 Unmodified _KYKDIQDKL_ ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6 14.40537977576856 0.2617374511876206 3 HK 2 8 6.1856 0.0 0.0 0.80707 0.0 0.0 370.1792406480347 128.07204614810783 498.2512867961425 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 HK 0.80707 - 115 + 1 1.572 261663.1 1.0 5212 5318 10516 HBL1_DMSO_200M_050219_1,10532 HBL1_DMSO_200M_050219_1,10532,KYKDIQDKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10533 54.983 609.0 155770.0 25 0 5294.8 + 31570 RQMQLEDGGQL 11 130 637.8118234447759 1273.6090939563517 2 637.8125488162041 MULTI CID FTMS 0 0 0 10516 195288.875 1.0 0 0.0 17 Unmodified _RQMQLEDGGQL_ ENSG00000160256|ENST00000291634|SLX9;ENST00000443486.1_1_21:15165183-15165459:+|nuORF;ENST00000479127.5_1_21:46378257-46396715:+|nuORF;ENST00000584979.1_1_18:14361435-14361894:-|nuORF;nc|ENSG00000160256|Q9NSI2-2|SLX9 39.21299971606389 0.2245192836502623 3 [AG]{I|L}SSQ{I|L}EDGGQ{I|L} 13 5 + 85.316 0.0 0.0 6.6988 6.6988 83.998 0.0 0.0 0.0 13.078050392593326 16.642078980768076 13.078050392593326 3.631779024128264 0 0.555462187404089 2.0 0.0 0.6109243748081782 [AG]{I|L}SSQ{I|L}EDGGQ{I|L};[AG]{I|L}SSQ{I|L}EDNQ{I|L};[AG]RMQ{I|L}EDGGQ{I|L};[AG]RMQ{I|L}EDNQ{I|L};[AG]{I|L}SSQ{I|L}EDGG[AG]{I|L};[AG]{I|L}SSQ{I|L}EDN[AG]{I|L};[Q{I|L}]SSQ{I|L}EDGGQ{I|L};[AG]RM[AG]{I|L}EDGGQ{I|L};[AG]RMQ{I|L}EDGG[AG]{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}EDGGQ{I|L} 6.6988;6.4136;6.3777;6.0949;5.9864;5.6992;5.6719;5.6633;5.6633;5.642 -;-;-;-;-;-;-;-;-;- 2670 1 1.572 76921.9 1.0 5213 5318 10516 HBL1_DMSO_200M_050219_1,10533 HBL1_DMSO_200M_050219_1,10533,RQMQLEDGGQL False True RQMQLEDGGQL 54.982609 637.812548816204 764971.5625 10516.0 nc|ENSG00000160256|Q9NSI2-2|SLX9;;ENST00000479127.5_1_21:46378257-46396715:+|nuORF;;ENSG00000160256|ENST00000291634|SLX9;;ENST00000584979.1_1_18:14361435-14361894:-|nuORF;;ENST00000443486.1_1_21:15165183-15165459:+|nuORF 6.185526847839356 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10534 54.994 588.0 346270.0 25 0 39386.0 + -1 QVEVCQRAFM 10 154 613.7855155510046 1225.556478168809 2 613.7856933474541 MULTI CID FTMS 0 0 0 10516 185357.515625 0.4553457660901838 -2 0.1884078979492187 18 Oxidation (M) _QVEVCQRAFM(Oxidation (M))_ REV__ENST00000588772.1_1_18:76914524-76954520:+|nuORF 21.53697664764585 0.484802182336468 3 VVSSVT[DN]D 9 -1 53.992 0.0 0.0 4.4055 0.0 0.0 221.0932346158777 85.03024469547108 306.12347931134883 0.0 0.0 0.0 0.0 0 0.5 0.0 2.829689690656103 0.0 VVSSVT[DN]D 4.4055 - 2439 + 1 1.572 152073.7 1.0 5214 5318 10516 HBL1_DMSO_200M_050219_1,10534 HBL1_DMSO_200M_050219_1,10534,QVEVCQRAFM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10535 55.006 672.0 152440.0 25 0 6842.1 -1 0 111 785.8998572522322 3139.5703231425287 4 786.4008666872978 MULTI CID FTMS 0 0 0 10516 178596.40625 0.4621056746784006 -1 0.1350631713867187 19 3 {I|L}SA{I|L}SD{I|L}HA[HK] 11 -1 73.761 0.0 0.0 2.3494 0.0 0.0 1948.9296917419497 0.0 1948.9296917419497 0.0 62.52420787634374 0.0 0.0 0 0.5 0.0 1.4049471895720984 0.0 {I|L}SA{I|L}SD{I|L}HA[HK] 2.3494 - 1117 + 1 1.572 76002.9 1.0 5215 5318 10516 HBL1_DMSO_200M_050219_1,10535 HBL1_DMSO_200M_050219_1,10535, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10536 55.017 637.0 80968.0 25 0 6123.8 -1 QDLSYYCCLEL 11 102 732.3133422732353 0 732.3133422732353 PEAK CID FTMS 0 0 0 -1 0 20 2 Carbamidomethyl (C) _QDLSYYC(Carbamidomethyl (C))C(Carbamidomethyl (C))LEL_ ENSG00000104356|ENST00000401707|POP1 12.240655878213236 0.4295705806160874 3 ANQQAE 6 -1 39.513 0.0 0.0 2.7016 0.0 0.0 328.1467103245919 490.1697481744751 818.3164584990669 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 ANQQAE 2.7016 - 145 + 1 1.572 41684.5 1.0 5216 5318 10516 HBL1_DMSO_200M_050219_1,10536 HBL1_DMSO_200M_050219_1,10536,QDLSYYCCLEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10538 55.021 4.8 16416000.0 25 0 3775800.0 + 14936 ILMEHIHKL 9 87 378.5547595158914 1132.6424491478742 3 378.5548889040947 MULTI CID FTMS 0 0 0 10537 11175155.0 0.7058324001316272 1 -0.0679588317871093 1 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 49.52724829834842 0.0414064571532091 3 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 80.21 0.0 0.0 7.0816 7.0816 94.26 0.0 0.0 0.0 51.00908219132221 11.92393970847391 11.92393970847391 24.623891063397423 0 0.6382104921644451 1.5228787452803376 0.8494850021680094 0.2302046884880938 + + {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQK{I|L};{I|L}{I|L}[YV]EQQK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}KQQ{I|L};{I|L}{I|L}[YV]EKQQ{I|L};{I|L}{I|L}[YV]KEQQ{I|L};{I|L}[YV]{I|L}EQQK{I|L};{I|L}[YV]{I|L}EKQQ{I|L};{I|L}[YV]{I|L}KEQQ{I|L} 7.0816;4.9076;4.5754;4.224;3.8918;3.3602;2.3352;1.6516;1.12 +;-;-;-;-;-;-;-;- + 732 + 1 1.582 67076.0 1.0 5217 5319 10537 HBL1_DMSO_200M_050219_1,10538 HBL1_DMSO_200M_050219_1,10538,ILMEHIHKL True True ILMEHIHKL 55.021496 378.554888904095 510423948.0 10537.0 ENSG00000108298|ENST00000225430|RPL19;;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;;ENST00000432746.1_1_7:102781798-102782185:-|nuORF 8.24581511815389 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10539 55.023 6.4 15913000.0 25 0 3854200.0 + 15397 IPPDQQRLI 9 59 540.3145428572215 1078.6145327812428 2 540.3145629763603 MULTI CID FTMS 0 0 0 10537 10767317.0 0.2067362228677976 8 -0.6467742919921875 2 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 22.736283301280096 0.2418982879461534 3 {I|L}PPDQ 5 4 66.013 0.0 0.0 6.1202 0.0 0.0 0.0 525.3156221979124 525.3156221979124 54.41962823435958 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + {I|L}PPDQ 6.1202 + + 50 + 1 1.582 90481.3 1.0 5218 5319 10537 HBL1_DMSO_200M_050219_1,10539 HBL1_DMSO_200M_050219_1,10539,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10540 55.024 7.7 8863900.0 25 0 2128200.0 + 9936 FPGKHFQEI 9 105 368.194404519104 1101.5613841575118 3 368.1943542361259 MULTI CID FTMS 0 0 0 10537 8444473.0 0.4782183298905505 8 -0.6467742919921875 3 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 26.268140514670165 0.1969607489560049 3 QE{I|L}{M(Oxidation (M))|F} 4 7 35.79 0.0 0.0 3.249 0.0 0.0 566.29887587715 0.0 566.29887587715 0.0 21.18562527100117 0.0 0.0 0 0.0 0.0 0.0 0.9247425010840048 QE{I|L}{M(Oxidation (M))|F} 3.249 - 526 1 1.582 62238.7 1.0 5219 5319 10537 HBL1_DMSO_200M_050219_1,10540 HBL1_DMSO_200M_050219_1,10540,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10541 55.025 11.0 6629300.0 25 0 966010.0 + 44900 YPPPEVRNI 9 65 542.7931421868918 1083.5717314405836 2 542.7932006716728 MULTI CID FTMS 0 0 0 10537 5395659.0 0.1135603356244112 8 -0.6467742919921875 4 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 20.580933911654288 0.2795815587326093 3 YPPPE 5 4 66.013 0.0 0.0 6.0922 0.0 0.0 0.0 497.2855598870078 497.2855598870078 48.3103844862778 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + YPPPE 6.0922 + + 111 + 1 1.582 67678.3 1.0 5220 5319 10537 HBL1_DMSO_200M_050219_1,10541 HBL1_DMSO_200M_050219_1,10541,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10542 55.026 19.0 6338600.0 25 0 640000.0 + 9929 FPGKHFQEI 9 110 551.7873955743806 1101.5602382155612 2 551.7878906130791 MULTI CID FTMS 0 0 0 10537 3342704.25 0.2536797634581698 8 -0.6467742919921875 5 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 64.9267550582149 0.0233543250187123 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKHQ{M(Oxidation (M))|F}{I|L}E 9 3 + 70.33 0.0 0.0 6.3846 6.3846 83.342 0.0 0.0 0.0 25.028010574831896 3.8955925013612216 3.8955925013612216 3.8955925013612216 0 1.3778623208748888 1.6989700043360187 1.0 0.75 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKHQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKHQE{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKHQ{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKH[AG]{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKH{M(Oxidation (M))|F}Q{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKH[AG]E{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKH[AG]{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKH{M(Oxidation (M))|F}QE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKH{M(Oxidation (M))|F}[AG]{I|L}E;[KG]P{M(Oxidation (M))|F}HQE{M(Oxidation (M))|F}{I|L} 6.3846;6.0309;5.5659;5.5486;5.4548;5.195;4.7299;4.6361;4.6188;4.1125 -;-;-;-;-;-;-;+;-;- + 2824 1 1.582 95408.8 1.0 5221 5319 10537 HBL1_DMSO_200M_050219_1,10542 HBL1_DMSO_200M_050219_1,10542,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10543 55.027 17.0 5471500.0 25 0 519160.0 + + 28675 VPSTAIREI 9 110 493.28757048685713 984.5605880405144 2 493.2872802615166 MULTI CID FTMS 0 0 0 10537 3064355.25 0.2386851879128068 2 -0.1397857666015625 6 Unmodified _PVPLPPTPPA_ ENST00000475504.6_1_10:62539923-62545554:+|nuORF;ENSG00000170312|ENST00000395284|CDK1;ENSG00000123374|ENST00000266970|CDK2;ENSG00000250506|ENST00000448471|CDK3;nc|ENSG00000123374|P24941-2|CDK2;nc|ENSG00000170312|P06493-2|CDK1;ENST00000567351.5_2_17:73997368-73998786:+|nuORF 36.04419817259434 0.1993394420055842 3 VPSTA{I|L} 6 -1 70.737 0.0 0.0 7.1846 0.0 0.0 0.0 413.2166536920532 413.2166536920532 45.07515625508539 0.0 0.0 0.0 0 0.6237125054200234 1.5228787452803376 0.75 0.0 VPSTA{I|L} 7.1846 - 473 + 1 1.582 74238.1 1.0 5222 5319 10537 HBL1_DMSO_200M_050219_1,10543 HBL1_DMSO_200M_050219_1,10543,PVPLPPTPPA False False VPSTAIREI 55.027389 493.287280261517 199314468.0 10537.0 ENST00000475504.6_1_10:62539923-62545554:+|nuORF;;ENSG00000170312|ENST00000395284|CDK1;;ENSG00000123374|ENST00000266970|CDK2;;ENSG00000250506|ENST00000448471|CDK3;;nc|ENSG00000123374|P24941-2|CDK2;;nc|ENSG00000170312|P06493-2|CDK1;;ENST00000567351.5_2_17:73997368-73998786:+|nuORF 4.418553272883098 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10544 55.029 24.0 2956800.0 25 0 289240.0 + 41598 VPPLATNTV 9 96 456.263596554667 910.512640176134 2 456.2637206912041 MULTI CID FTMS 0 0 0 10537 2837793.0 0.2834110357002111 2 -0.1397857666015625 7 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 77.98433622928108 0.0180125044636492 3 [{I|L}P]PATNVTV 9 3 + 74.394 0.0 0.0 8.1706 8.1706 86.387 0.0 0.0 0.0 4.036757287974666 16.478174818886373 4.036757287974666 3.0102999566398125 0 0.7742275032520141 1.2218487496163564 1.1549471895720984 0.3252574989159953 [{I|L}P]PATNVTV;[{I|L}P]APTNVTV;[VP][VS]PNVTV;[VP]P{I|L}ATNTV;[{I|L}P]PAVTNTV;[{I|L}P]ATPNVTV;[{I|L}P]PATVNTV;[VP][VS]NPVTV;[{I|L}P]ATNPVTV;[{I|L}P]APVTNTV 8.1706;7.8399;7.7272;7.6994;7.6761;7.6732;7.6186;7.4406;7.3866;7.3455 -;-;-;+;-;-;-;-;-;- + 1188 1 1.582 59788.9 1.0 5223 5319 10537 HBL1_DMSO_200M_050219_1,10544 HBL1_DMSO_200M_050219_1,10544,VPPLATNTV True True VPPLATNTV 55.028569 456.263720691204 290135008.0 10537.0 nc|ENSG00000136715|Q9H0E3-2|SAP130;;ENSG00000136715|ENST00000643581|SAP130;;nc|ENSG00000136715|Q9H0E3-3|SAP130;;nc|ENSG00000136715|Q9H0E3|SAP130 5.861592133839925 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10545 55.03 70.0 1999400.0 25 0 185350.0 -1 MERTSFCSWRQ 11 110 744.3308442092342 1486.6471354852683 2 744.3315307497978 MULTI CID FTMS 0 0 0 10537 1004057.3125 0.4644087602196473 -1 0.1197128295898437 8 Carbamidomethyl (C) _MERTSFC(Carbamidomethyl (C))SWRQ_ ENST00000436551.1_1_2:42158959-42160496:-|nuORF 10.150570793230772 0.8240029794358671 3 {[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 76.227 0.0 0.0 5.1274 5.1274 75.819 0.0 0.0 0.0 1.783127190496387 9.041465128144935 1.783127190496387 1.783127190496387 0 0.7742275032520141 0.0 0.0 1.705112052208703 {[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQ{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGAE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F}Y 5.1274;5.0075;4.8074;4.6857;4.6807;4.5856;4.559;4.52;4.5172;4.5172 -;-;-;-;-;-;-;-;-;- 7750 1 1.582 103483.4 1.0 5224 5319 10537 HBL1_DMSO_200M_050219_1,10545 HBL1_DMSO_200M_050219_1,10545,MERTSFCSWRQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10546 55.032 91.0 1255200.0 25 0 184960.0 + 3247 AYFTHSNL 8 124 476.72966298137015 951.4447730295404 2 476.7297546267509 MULTI CID FTMS 0 0 0 10537 817725.3125 0.5820303686315486 -1 0.1197128295898437 9 Unmodified _AYFTHSNL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 44.40701690623563 0.1655546087385432 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}TT 5 4 47.338 0.0 0.0 4.9754 0.0 0.0 0.0 365.16242395572505 365.16242395572505 18.554752938511147 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8882104921644451 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}TT 4.9754 - 625 + 1 1.582 89126.5 1.0 5225 5319 10537 HBL1_DMSO_200M_050219_1,10546 HBL1_DMSO_200M_050219_1,10546,AYFTHSNL False True AYFTHSNL 55.03226 476.729754626751 8950550.0 10537.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 3.530059963464737 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10547 55.034 98.0 1463400.0 25 0 80120.0 + 38050 TPESKIRFV 9 119 359.54213475329954 1075.6045748600986 3 359.5413085818291 MULTI CID FTMS 0 0 0 10537 792543.875 0.1795299757687591 -2 0.2547760009765625 10 Unmodified _TPESKIRFV_ ENSG00000093144|ENST00000454859|ECHDC1;ENST00000475319.1_1_6:127611016-127636085:-|nuORF;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1 37.07464296494664 0.0915153923251136 3 TPESK{I|L}R{M(Oxidation (M))|F}V 9 0 + 80.096 0.0 0.0 7.4466 7.4466 94.744 0.0 0.0 0.0 60.0772252214386 0.177066102091274 0.177066102091274 18.750612633917 0 0.6989700043360187 1.3979400086720375 1.0941876774005248 0.3807196863200844 + + TPESK{I|L}R{M(Oxidation (M))|F}V;TPEV[KT]R{M(Oxidation (M))|F}V;TPVE[KT]R{M(Oxidation (M))|F}V;TPEV[YK][Q{I|L}]V;TPVE[YK][Q{I|L}]V;TVPE[KT]R{M(Oxidation (M))|F}V;TV[SG]PT{I|L}R{M(Oxidation (M))|F}V;{[VA]|[{I|L}G]}[H{I|L}]{I|L}KS[HA]T;TVPE[YK][Q{I|L}]V;H[YN]K{I|L}R{M(Oxidation (M))|F}V 7.4466;5.7033;4.826;4.325;3.7161;3.6675;3.4309;2.9819;2.5576;1.944 +;-;-;-;-;-;-;-;-;- + 294 + 1 1.582 140798.7 1.0 5226 5319 10537 HBL1_DMSO_200M_050219_1,10547 HBL1_DMSO_200M_050219_1,10547,TPESKIRFV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10548 55.037 128.0 1561200.0 25 0 81662.0 + 4918 DGLCVSLRGG 10 173 488.7463658334003 975.4781787336008 2 488.7463867068291 MULTI CID FTMS 0 0 0 10537 807852.25 0.3466524647614601 -10 0.8449630737304688 11 Unmodified _DGLCVSLRGG_ REV__nc|ENSG00000150510|Q86V42-3|FAM124A 41.95555342248728 0.1369168616057562 3 {[RE]|[WV]}CV[NG]VS{I|L} 9 -1 + 50.032 0.0 0.0 5.129 5.129 77.333 0.0 0.0 0.0 3.316888488699199 3.0153844027245924 3.0153844027245924 2.9659780392387347 0 1.0044321917401078 0.958607314841775 0.4604093769761876 0.4247425010840047 {[RE]|[WV]}CV[NG]VS{I|L};{[RE]|[WV]}CVSVNG{I|L};{[RE]|[WV]}CV[NG]VTV;{[VA]|[{I|L}G]}D{[WT]|[RM]}TNG{I|L};{[RE]|[WV]}CVSVNAV;{[RE]|[WV]}CV[NG]V{I|L}S;[TP]S{[WT]|[RM]}TNG{I|L};{[VA]|[{I|L}G]}D{[WT]|[RM]}TGGG{I|L};{[VA]|[{I|L}G]}VS[WM]NG{I|L};{[DS]|[MA]|[CV]|TT}WV[NG]VS{I|L} 5.129;4.8249;4.8198;4.7889;4.5158;4.2233;3.979;3.845;3.8364;3.8142 -;-;-;-;-;-;-;-;-;- 4186 + 1 1.582 152365.8 1.0 5227 5319 10537 HBL1_DMSO_200M_050219_1,10548 HBL1_DMSO_200M_050219_1,10548,DGLCVSLRGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10549 55.043 339.0 935200.0 25 0 117080.0 + 21958 LPPMDHSTI 9 162 505.7524556931607 1009.4903584531214 2 505.7524291872978 MULTI CID FTMS 0 0 0 10537 703159.8125 0.2819194440914013 8 -0.6467742919921875 12 Unmodified _LPPMDHSTI_ ENSG00000064666|ENST00000263097|CNN2;nc|ENSG00000064666|Q99439-2|CNN2 100.37149154755038 0.0107586824602606 3 {I|L}PPMDHST{I|L} 9 0 + 90.707 0.0 0.0 8.9855 8.9855 95.807 0.0 0.0 0.0 50.02320417602277 13.46787486224656 13.46787486224656 11.381708555588505 0 1.3516784832448856 2.0 2.0180650454571527 0.0 + + {I|L}PPMDHST{I|L};{I|L}PPMDHTS{I|L};{I|L}PPMDHTTV;{I|L}P{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]T{I|L};{I|L}PPMD[YK]{M(Oxidation (M))|F};{I|L}P{I|L}HEEC(Carbamidomethyl (C)){I|L};{I|L}P{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[VS]ST{I|L};{I|L}P[{M(Oxidation (M))|F}V]DHSPV;{I|L}P{I|L}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}T]C(Carbamidomethyl (C)){I|L};{I|L}P[{M(Oxidation (M))|F}V]DHPSV 8.9855;7.858;6.9728;6.335;6.0151;5.7027;5.629;5.4614;5.4045;5.3216 +;-;-;-;-;-;-;-;-;- + 2276 + 1 1.582 235077.2 1.0 5228 5319 10537 HBL1_DMSO_200M_050219_1,10549 HBL1_DMSO_200M_050219_1,10549,LPPMDHSTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10550 55.045 93.0 1743000.0 25 0 155700.0 + 4143 DAPHPPLKI 9 126 329.8590105895294 986.5552023687884 3 329.8588439822197 MULTI CID FTMS 0 0 0 10537 650316.0 0.0150388591043193 -19 1.8500480651855469 13 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 18.1463463914782 0.3454829746528889 3 {[DA]|[EG]}PHPP{I|L}K{I|L} 9 0 + 53.207 0.0 0.0 5.3932 5.3932 89.948 0.0 0.0 0.0 40.774686202424576 9.240891707739785 9.240891707739785 53.20680421474339 0 0.3252574989159953 2.0 0.0 0.25 + + {[DA]|[EG]}PHPP{I|L}K{I|L} 5.3932 + + 89 + 1 1.582 133419.6 1.0 5229 5319 10537 HBL1_DMSO_200M_050219_1,10550 HBL1_DMSO_200M_050219_1,10550,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10551 55.048 143.0 963390.0 25 0 178900.0 40956 VLVGKAAA 8 114 364.7369247496453 0 364.7369262576103 PEAK CID FTMS 0 0 0 10537 605638.125 0.7472957387714307 -1 0.1197128295898437 14 Unmodified _VLVGKAAA_ ENSG00000143801|ENST00000366783|PSEN2;nc|ENSG00000288674|P49810-2|PSEN2;nc|ENSG00000288674|P49810-3|PSEN2 20.871210003555333 0.4015059659087983 3 V{I|L} 2 6 14.554 0.0 0.0 2.0007 0.0 0.0 113.08280408138292 399.20034780029965 512.2831518816826 0.0 0.0 0.0 0.0 0 0.5090530431636111 0.0 0.0 0.0 + V{I|L} 2.0007 + + 64 + 1 1.582 112187.9 1.0 5230 5319 10537 HBL1_DMSO_200M_050219_1,10551 HBL1_DMSO_200M_050219_1,10551,VLVGKAAA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10552 55.056 432.0 362540.0 25 0 40428.0 + -1 FAAFCCYDN 9 151 555.705603076292 1109.396653219384 2 555.7060424685478 MULTI CID FTMS 0 0 0 10537 453938.75 0.5079655890803995 -1 0.1197128295898437 15 Carbamidomethyl (C) _FAAFC(Carbamidomethyl (C))CYDN_ REV__ENSG00000134121|ENST00000256509|CHL1;REV__nc|ENSG00000134121|O00533|CHL1 12.531546534597751 0.4974689918368763 3 [HV]YTAN 6 -1 40.327 0.0 0.0 3.6351 0.0 0.0 0.0 421.0688570611938 421.0688570611938 19.11597682053261 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.4247425010840047 1.3807196863200843 [HV]YTAN 3.6351 - 481 + 1 1.582 120945.7 1.0 5231 5319 10537 HBL1_DMSO_200M_050219_1,10552 HBL1_DMSO_200M_050219_1,10552,FAAFCCYDN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10553 55.059 170.0 544300.0 25 0 39230.0 + 4284 DAREAGFQV 9 113 496.7433119905904 991.4720710479808 2 496.7427856326103 MULTI CID FTMS 0 0 0 10537 453123.34375 0.0391126810788881 2 -0.1397857666015625 16 Unmodified _DAREAGFQV_ chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-13|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-6|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 17.44264345198275 0.3645313841742926 3 PCG{M(Oxidation (M))|F}QV 6 5 34.729 0.0 0.0 3.5027 0.0 0.0 342.1656971662125 0.0 342.1656971662125 0.0 20.291681396006 0.0 0.0 0 0.25 0.0 0.0 0.0 PCG{M(Oxidation (M))|F}QV 3.5027 - 312 1 1.582 73468.2 1.0 5232 5319 10537 HBL1_DMSO_200M_050219_1,10553 HBL1_DMSO_200M_050219_1,10553,DAREAGFQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10554 55.063 185.0 639480.0 25 0 42847.0 -1 LPVCQWEE 8 159 530.7433095394466 1059.4720661456931 2 530.7440673708916 MULTI CID FTMS 0 0 0 10537 436466.625 0.2773872539548978 -10 0.8449630737304688 17 Carbamidomethyl (C) _LPVC(Carbamidomethyl (C))QWEE_ ENST00000394198.6_1_3:97686093-97686171:-|nuORF 28.486842064014134 0.4448922141344407 3 {I|L}PEP{I|L}GNV 8 -1 63.937 0.0 0.0 6.0348 0.0 0.0 0.0 237.0015658014281 237.0015658014281 40.22105818254797 0.0 0.0 0.0 0 2.278659694992122 2.0 0.0 0.9802046884880936 {I|L}PEP{I|L}GNV 6.0348 - 2015 + 1 1.582 97744.7 1.0 5233 5319 10537 HBL1_DMSO_200M_050219_1,10554 HBL1_DMSO_200M_050219_1,10554,LPVCQWEE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10555 55.071 461.0 349760.0 25 0 40264.0 + 22963 LSFLELCTQQV 11 129 640.8325166679545 1279.6504804027088 2 640.8325683474541 MULTI CID FTMS 0 0 0 10537 398994.21875 0.6922822210045416 -1 0.1197128295898437 18 Unmodified _LSFLELCTQQV_ nc|ENSG00000230246|P0DKV0-2|SPATA31C1;nc|ENSG00000230246|P0DKV0|SPATA31C1 17.11289562659939 0.6791789249425932 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}QGSVTE[YR] 11 9 + 59.575 0.0 0.0 4.6556 4.6556 74.699 0.0 0.0 0.0 2.0481545863422 7.367585652254178 2.0481545863422 2.0481545863422 0 0.0 1.0969100130080565 1.9634679910804405 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}QGSVTE[YR];[QT]PS{I|L}SVTE[YR];[QA]VD{I|L}SVTE[YR];{[QV]|[N{I|L}]|[RA]|[KV]}AD{I|L}SVTE[YR];{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}{I|L}SVTE[YR];{[TV]|[{I|L}S]}[PA]TGSVTE[YR];{[QG]|[NA]}{I|L}D{I|L}SVTE[YR];[QA]DV{I|L}SVTE[YR];{[VA]|[{I|L}G]}QD{I|L}SVTE[YR];[QP]TS{I|L}SVTE[YR] 4.6556;4.4955;4.3999;4.3999;4.2789;4.1291;4.0611;4.0271;3.9818;3.9546 -;-;-;-;-;-;-;-;-;- 7143 1 1.582 122596.5 1.0 5234 5319 10537 HBL1_DMSO_200M_050219_1,10555 HBL1_DMSO_200M_050219_1,10555,LSFLELCTQQV False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10556 55.074 186.0 653710.0 25 0 38187.0 + -1 MPNTRPPII 9 145 527.2899528545865 1052.565352775973 2 527.7895385622978 MULTI CID FTMS 0 0 0 10537 345663.1875 0.053592097525369 -10 0.8449630737304688 19 Oxidation (M) _M(Oxidation (M))LYKANKAV_ ENSG00000084774|ENST00000264705|CAD 12.531546534597751 0.4974689918368763 3 [YN][QT]P 5 -1 22.816 0.0 0.0 2.1677 0.0 0.0 0.0 446.2611895281793 446.2611895281793 -2.654856465551987 0.0 -2.654856465551987 0.0 0 0.2614393726401688 2.0 0.0 0.0 [YN][QT]P 2.1677 - 788 1 1.582 98878.9 1.0 5235 5319 10537 HBL1_DMSO_200M_050219_1,10556 HBL1_DMSO_200M_050219_1,10556,MLYKANKAV False False MPNTRPPII 55.0744 527.789538562298 5843240.0 10537.0 ENSG00000084774|ENST00000264705|CAD 6.4955728848775225 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10557 55.085 553.0 334230.0 25 0 35044.0 + -1 QNNMSIWCQHS 11 137 710.7921309741857 1419.5697090151714 2 710.7930175662041 MULTI CID FTMS 0 0 0 10537 267525.53125 0.7125243585583113 -1 0.1197128295898437 20 Carbamidomethyl (C),Oxidation (M) _QNNM(Oxidation (M))SIWC(Carbamidomethyl (C))QHS_ REV__ENST00000186436.9_1_2:98475819-98543905:-|nuORF 8.155526934196011 0.8366696279279818 3 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 74.165 0.0 0.0 5.2245 0.0 0.0 335.1236104103667 0.0 335.1236104103667 0.0 52.19248940792225 0.0 0.0 0 0.8182503180159344 0.0 0.9634679910804403 1.110924374808178 DEAQQNA{M(Oxidation (M))|F}Y 5.2245 - 5784 1 1.582 134275.4 1.0 5236 5319 10537 HBL1_DMSO_200M_050219_1,10557 HBL1_DMSO_200M_050219_1,10557,QNNMSIWCQHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10559 55.089 23.0 1147200.0 25 0 115290.0 -1 LIWKMWKL 8 50 567.3288778843483 1132.6432028354966 2 567.3289062380791 MULTI CID FTMS 0 0 0 10558 3249408.75 1.0 0 0.0 1 Oxidation (M) _LIWKM(Oxidation (M))WKL_ ENST00000549086.2_1_12:53594948-53600469:-|nuORF 13.50788311687929 0.7113601687236069 3 {I|L}{I|L} 2 -1 45.217 0.0 0.0 3.9921 0.0 0.0 0.0 903.45296083373 903.45296083373 38.22682509756042 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L} 3.9921 + + 17 + 1 1.582 26188.8 1.0 5237 5320 10558 HBL1_DMSO_200M_050219_1,10559 HBL1_DMSO_200M_050219_1,10559,LIWKMWKL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10560 55.091 30.0 1690900.0 25 0 340680.0 + 38154 TPPLWSVVV 9 80 499.287904622016 996.561256310832 2 499.2876464724541 MULTI CID FTMS 0 0 0 10558 1645347.75 1.0 0 0.0 2 Unmodified _TPPLWSVVV_ REV__ENSG00000177103|ENST00000651296|DSCAML1;REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1 16.942295170755138 0.3780752226737986 3 {NN|[MP]|[D{I|L}]|[EV]}[RP]G{I|L}EVV 9 -1 + 51.309 0.0 0.0 5.1486 5.1486 78.716 0.0 0.0 0.0 7.113037394097432 37.96433691538908 7.113037394097432 3.52182518111362 0 0.9247425010840048 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[RP]G{I|L}EVV;{NN|[MP]|[D{I|L}]|[EV]}[PG]R{I|L}EVV;{NN|[MP]|[D{I|L}]|[EV]}[RP]AVEVV;{NN|[MP]|[D{I|L}]|[EV]}[RP]AEVVV;{[VA]|[{I|L}G]}[DP]R{I|L}EVV;{NN|[MP]|[D{I|L}]|[EV]}[HT][KS]VVV;{NN|[MP]|[D{I|L}]|[EV]}[RP][W{I|L}]VV;{NN|[MP]|[D{I|L}]|[EV]}[PG][W{I|L}]VVV;{NN|[MP]|[D{I|L}]|[EV]}[PG]V[W{I|L}]VV;{[VA]|[{I|L}G]}[DP][W{I|L}]VVV 5.1486;4.7952;4.6698;4.3678;4.1239;3.8712;2.9191;2.9137;2.6116;2.2424 -;-;-;-;-;-;-;-;-;- 296 1 1.582 44780.2 1.0 5238 5320 10558 HBL1_DMSO_200M_050219_1,10560 HBL1_DMSO_200M_050219_1,10560,TPPLWSVVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10561 55.092 9.6 6072100.0 25 0 598250.0 + 25018 MPQNRTIYV 9 85 561.2918750284074 1120.569197123615 2 561.2921020388603 MULTI CID FTMS 0 0 0 10558 3634927.5 0.530265758889988 -2 0.1876716613769531 3 Unmodified _MPQNRTIYV_ ENSG00000166801|ENST00000675163|FAM111A 15.248480904072842 0.4239247793462406 3 MPQ 3 6 39.922 0.0 0.0 3.5626 0.0 0.0 0.0 761.3947894577083 761.3947894577083 26.746199743006045 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + MPQ 3.5626 + + 30 + 1 1.582 50109.0 1.0 5239 5320 10558 HBL1_DMSO_200M_050219_1,10561 HBL1_DMSO_200M_050219_1,10561,MPQNRTIYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10562 55.093 11.0 5715800.0 25 0 501770.0 + 8926 FALQSSSVF 9 92 493.25372903713264 984.4929051410652 2 493.2537719607353 MULTI CID FTMS 0 0 0 10558 4019932.25 1.0 0 0.0 4 Unmodified _FALQSSSVF_ ENSG00000198569|ENST00000673835|SLC34A3 20.453626601364224 0.2830276176381075 3 [PS]ASS[YK]V{M(Oxidation (M))|F} 9 6 + 42.32 0.0 0.0 4.2986 4.2986 84.204 0.0 0.0 0.0 8.529287134207209 10.580664059702215 8.529287134207209 14.424464483802575 0 0.8935078169319297 1.0 1.2803695511246984 0.0 [PS]ASS[YK]V{M(Oxidation (M))|F};[VG]{[DA]|[EG]}S[YK]V{M(Oxidation (M))|F};{[SA]|[TG]}PSS[YK]V{M(Oxidation (M))|F};[PS]A[YK]{[CA]|SS}V{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KT]V{M(Oxidation (M))|F};[VG][YV]Q{[CA]|SS}V{M(Oxidation (M))|F} 4.2986;2.8335;2.1667;1.5986;1.1612;0.87385 -;-;-;-;-;- 285 1 1.582 49833.9 1.0 5240 5320 10558 HBL1_DMSO_200M_050219_1,10562 HBL1_DMSO_200M_050219_1,10562,FALQSSSVF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10563 55.094 37.0 1389500.0 25 0 106510.0 + 3792 DAIARLKEV 9 80 507.80064159786286 1013.5867302625256 2 507.8010131716728 MULTI CID FTMS 0 0 0 10558 1373415.75 1.0 0 0.0 5 Unmodified _DAIARLKEV_ ENSG00000160752|ENST00000368356|FDPS;ENST00000461507.5_1_1:155279855-155288124:+|nuORF;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;ENST00000487002.1_1_1:155279855-155282231:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS 34.221707139014875 0.1071766711162635 3 {[DA]|[EG]}{I|L}AR{I|L}KEV 9 0 + 61.053 0.0 0.0 6.0235 6.0235 90.723 0.0 0.0 0.0 8.08931538997598 44.45940619637945 8.08931538997598 20.22878745280337 0 1.4731975075880328 2.0 0.0 0.0 + + {[DA]|[EG]}{I|L}AR{I|L}KEV;{NN|[MP]|[D{I|L}]|[EV]}AAR{I|L}KEV;[TP]TAR{I|L}KEV;[{I|L}A]DAR{I|L}KEV;V{M(Oxidation (M))|F}K[RH][KT]V;[{I|L}A][RK]{I|L}ADEV;V{M(Oxidation (M))|F}K[RH][KS]{I|L};[{I|L}A][RK]E{[VA]|[{I|L}G]}EV 6.0235;4.0277;3.0863;2.9287;1.8796;1.6798;1.3202;1.1135 +;-;-;-;-;-;-;- + 241 1 1.582 43495.6 1.0 5241 5320 10558 HBL1_DMSO_200M_050219_1,10563 HBL1_DMSO_200M_050219_1,10563,DAIARLKEV True True DAIARLKEV 55.09417 507.801013171673 7411751.5 10558.0 ENST00000487002.1_1_1:155279855-155282231:+|nuORF;;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;;ENST00000461507.5_1_1:155279855-155288124:+|nuORF;;nc|ENSG00000160752|P14324-2|FDPS;;ENSG00000160752|ENST00000368356|FDPS 3.648407936096192 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10564 55.096 72.0 815710.0 25 0 56488.0 + 29266 QHPPPPVR 8 81 309.843664781875 926.5091649458252 3 309.8434631228447 MULTI CID FTMS 0 0 0 10558 1052795.25 1.0 0 0.0 6 Unmodified _QHPPPPVR_ REV__ENST00000540486.5_1_17:7833707-7833791:-|nuORF 8.593279151180031 0.7721714526254883 3 [HN]VGV{M(Oxidation (M))|F}VR 8 -1 + 49.104 0.0 0.0 5.2999 5.2999 75.838 0.0 0.0 0.0 0.6694678963061307 1.663314217665253 0.6694678963061307 1.4916623986031396 0 1.1237125054200234 0.0 0.0 0.3252574989159953 [HN]VGV{M(Oxidation (M))|F}VR;[HN]VGVV{M(Oxidation (M))|F}R;[HN]VGV{M(Oxidation (M))|F}RV 5.2999;5.1389;5.1204 -;-;- 89 + 1 1.582 52394.4 1.0 5242 5320 10558 HBL1_DMSO_200M_050219_1,10564 HBL1_DMSO_200M_050219_1,10564,QHPPPPVR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10565 55.097 68.0 633020.0 25 0 76768.0 42865 VVLKNEIKI 9 82 352.5655926629179 1054.6749485889536 3 352.5653869509697 MULTI CID FTMS 0 0 0 10558 833447.375 0.4782607167506401 -1 0.0679588317871093 7 Unmodified _VVLKNEIKI_ nc|ENSG00000137492|O43422-2|THAP12 23.78978130925829 0.2284941198415988 3 VV{I|L}K 4 5 40.005 0.0 0.0 3.7931 0.0 0.0 0.0 612.3396700494749 612.3396700494749 27.24087460279588 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + VV{I|L}K 3.7931 + + 45 + 1 1.582 47298.9 1.0 5243 5320 10558 HBL1_DMSO_200M_050219_1,10565 HBL1_DMSO_200M_050219_1,10565,VVLKNEIKI False True VVIKKLNEI 55.097464 352.56538695097 10224482.0 10558.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 1.6276373664538066 3.0 False 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10566 55.099 63.0 850460.0 25 0 60720.0 + 33217 SFLRGTTSY 9 90 516.2614603556917 1030.5083677781834 2 516.2622558474541 MULTI CID FTMS 0 0 0 10558 824229.5 0.3231593914297605 -2 0.1876716613769531 8 Unmodified _SFLRGTTSY_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 45.739877483867886 0.0497104363764649 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R{[SA]|[TG]}TSY 9 0 + 53.685 0.0 0.0 5.2095 5.2095 80.218 0.0 0.0 0.0 12.693409159737854 31.372476520178463 12.693409159737854 4.594217171654108 0 2.182233306928365 1.6989700043360187 0.7302046884880937 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R{[SA]|[TG]}TSY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R{[SA]|[TG]}GMY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R[KC]DY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R{[QS]|[NT]}MY;{I|L}{I|L}[YN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SY;[HM]T{[SA]|[TG]}R{I|L}C{I|L};[HM]T{[SA]|[TG]}[{I|L}T]AS{I|L};[HM]T{[SA]|[TG]}[{I|L}T]ATV;[HM]T{[SA]|[TG]}[{I|L}T]TG{I|L} 5.2095;4.7637;3.9687;3.9091;3.5229;2.9992;1.5681;0.75064;0.701;0.5148 +;-;-;-;-;-;-;-;-;- + 457 1 1.582 44725.3 1.0 5244 5320 10558 HBL1_DMSO_200M_050219_1,10566 HBL1_DMSO_200M_050219_1,10566,SFLRGTTSY True True SFLRGTTSY 55.099016 516.262255847454 28921212.0 10558.0 nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;;ENSG00000100991|ENST00000252015|TRPC4AP 6.685439745585124 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10567 55.101 103.0 593750.0 25 0 144600.0 -1 0 85 522.291865602265 521.284589135665 1 522.2922851443291 MULTI CID FTMS 0 0 0 10558 739775.8125 0.4045220473569562 3 -0.2467765808105468 9 3 [YQ]V{I|L} 4 -1 + 54.693 0.0 0.0 10.492 10.492 99.392 0.0 0.0 0.0 26.73393743112328 45.295607260593286 26.73393743112328 54.69273760456403 0 0.6989700043360187 1.3010299956639813 0.0 0.8494850021680094 [YQ]V{I|L} 10.492 - 42 1 1.582 53111.8 1.0 5245 5320 10558 HBL1_DMSO_200M_050219_1,10567 HBL1_DMSO_200M_050219_1,10567, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10568 55.104 119.0 347030.0 25 0 39343.0 + 5839 DPSTPAQVI 9 79 464.2428536611727 0 464.2433044314384 PEAK CID FTMS 0 0 0 10558 539286.625 0.8411119040542486 -1 0.0679588317871093 10 Unmodified _DPSTPAQVI_ ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-6|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693|LPIN1 21.74664581756881 0.185237546287679 3 WVDA 4 8 11.909 0.0 0.0 1.2854 0.0 0.0 230.1581793909017 222.08967004947505 452.2478494403768 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 WVDA 1.2854 - 108 + 1 1.582 38199.7 1.0 5246 5320 10558 HBL1_DMSO_200M_050219_1,10568 HBL1_DMSO_200M_050219_1,10568,DPSTPAQVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10569 55.112 472.0 289130.0 25 0 20848.0 -1 0 128 925.428061669379 1848.8415704055576 2 925.4280883669852 MULTI CID FTMS 0 0 0 10558 493318.21875 1.0 0 0.0 11 3 [NP]{I|L}T[HC]RQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 92.895 0.0 0.0 5.0245 5.0245 74.088 0.0 0.0 0.0 13.433677739595026 65.95374069816361 13.433677739595026 0.9813624419633272 0 1.774227503252014 1.0 0.8494850021680094 1.110924374808178 [NP]{I|L}T[HC]RQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}TC(Carbamidomethyl (C))[HV]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[QP]{[SA]|[TG]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}T[HT]{[SA]|[TG]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}T[HC][VG]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}T[HC]RQAEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}T[HC]RQAEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}T[HC]R[AG]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 5.0245;4.9714;4.9452;4.5915;4.5653;4.537;4.537;4.537;4.537;4.4839 -;-;-;-;-;-;-;-;-;- 4246 1 1.582 93114.4 1.0 5247 5320 10558 HBL1_DMSO_200M_050219_1,10569 HBL1_DMSO_200M_050219_1,10569, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10570 55.115 139.0 612010.0 25 0 61980.0 + 37055 TGFSPRQI 8 115 453.2454977186477 904.4764425040954 2 453.2459899783134 MULTI CID FTMS 0 0 0 10558 463574.625 0.0123652940065585 14 -1.1090431213378906 12 Unmodified _TGFSPRQI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 26.88365393820708 0.4786498634179528 3 {[SA]|[TG]}{M(Oxidation (M))|F}S{I|L} 5 3 35.916 0.0 0.0 3.971 0.0 0.0 0.0 396.1995943658813 396.1995943658813 24.13363846147844 0.0 0.0 0.0 0 0.75 1.3979400086720375 0.0 0.0 {[SA]|[TG]}{M(Oxidation (M))|F}S{I|L} 3.971 - 119 + 1 1.582 69321.5 1.0 5248 5320 10558 HBL1_DMSO_200M_050219_1,10570 HBL1_DMSO_200M_050219_1,10570,TGFSPRQI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10571 55.118 141.0 696720.0 25 0 55993.0 + 20127 LKLLLFPV 8 149 471.82114343264345 941.6277339320868 2 471.8213378787041 MULTI CID FTMS 0 0 0 10558 432576.40625 1.0 0 0.0 13 Unmodified _LKLLLFPV_ REV__ENST00000396582.6_1_14:32626211-32626439:+|nuORF 28.17323086031832 0.4514957916281387 3 {[VA]|[{I|L}G]}KVY{I|L}V 7 -1 28.549 0.0 0.0 3.0319 0.0 0.0 0.0 166.11824841866817 166.11824841866817 10.064119211036626 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[VA]|[{I|L}G]}KVY{I|L}V 3.0319 - 1057 1 1.582 79041.2 1.0 5249 5320 10558 HBL1_DMSO_200M_050219_1,10571 HBL1_DMSO_200M_050219_1,10571,LKLLLFPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10572 55.121 139.0 443510.0 25 0 47363.0 2515 ASAGPAIKL 9 96 414.2523626578647 826.4901723825294 2 414.2527648806572 MULTI CID FTMS 0 0 0 10558 391772.96875 0.4300602076435084 -1 0.0679588317871093 14 Unmodified _ASAGPAIKL_ ENSG00000166897|ENST00000402918|ELFN2 24.020572477871973 0.2255576514309169 3 [QP]ASA{I|L}K{I|L} 8 4 + 29.404 0.0 0.0 3.5576 3.5576 77.762 0.0 0.0 0.0 6.989700043360188 9.5229767099463 6.989700043360188 7.009045041132183 0 0.5 0.0 0.0 0.25 [QP]ASA{I|L}K{I|L};[QP][WR]K{I|L};[QP][QT]{I|L}K{I|L};[QP]ASA{I|L}{I|L}K;[QP][WR]{I|L}K;[QP][QT]{I|L}{I|L}K 3.5576;2.7096;2.4518;2.4054;1.5574;1.2996 -;-;-;-;-;- 145 + 1 1.582 53755.4 1.0 5250 5320 10558 HBL1_DMSO_200M_050219_1,10572 HBL1_DMSO_200M_050219_1,10572,ASAGPAIKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10573 55.125 230.0 261000.0 25 0 21013.0 + 10744 FYIENQKEY 9 95 617.29331934292 1232.57208575264 2 617.7947875857353 MULTI CID FTMS 0 0 0 10558 348037.40625 1.0 0 0.0 15 Unmodified _FYIENQKEY_ ENSG00000164902|ENST00000297540|PHAX 20.41453444215458 0.284085796332423 3 E{I|L}[YE] 4 6 18.232 0.0 0.0 1.4792 0.0 0.0 680.3185902326187 0.0 680.3185902326187 0.0 4.737059521965108 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 E{I|L}[YE] 1.4792 - 188 1 1.582 50251.0 1.0 5251 5320 10558 HBL1_DMSO_200M_050219_1,10573 HBL1_DMSO_200M_050219_1,10573,FYIENQKEY False True FYIENQKEY 55.124847 617.794787585735 2454411.0 10558.0 ENSG00000164902|ENST00000297540|PHAX 3.721229871114095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10574 55.128 170.0 399880.0 25 0 63028.0 + 21145 LPARLTQV 8 109 449.27807097328434 896.5415890133687 2 449.2797424197197 MULTI CID FTMS 0 0 0 10558 323387.8125 0.7994580155160402 -1 0.0679588317871093 16 Unmodified _LPARLTQV_ ENSG00000011523|ENST00000377990|CEP68;ENST00000497039.1_1_2:65298581-65300050:+|nuORF 39.957323273325 0.2350051964751539 3 [{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}TQ{I|L}V 8 2 + 46.661 0.0 0.0 5.2045 5.2045 81.175 0.0 0.0 0.0 13.696662315049934 15.066753121453402 13.696662315049934 5.440680443502757 0 0.6989700043360187 1.3010299956639813 0.3807196863200844 0.0 [{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}TQ{I|L}V;[{I|L}P]T{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}V;[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}T[AG]{I|L}V;[{I|L}P]T{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{I|L}V;[{I|L}A][RP]TQ{I|L}V;[{I|L}A][RP]T[AG]{I|L}V;[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}[WR]V;AA{[TV]|[{I|L}S]}[VP]Q{I|L}V;[{I|L}A]{[SA]|[TG]}[VP]Q{I|L}V;{[SA]|[TG]}[{I|L}A][VP]Q{I|L}V 5.2045;4.5977;4.1714;3.5646;3.5227;2.4896;2.3092;2.0928;2.0457;1.0186 -;-;-;-;-;-;-;-;-;- 146 1 1.582 60380.4 1.0 5252 5320 10558 HBL1_DMSO_200M_050219_1,10574 HBL1_DMSO_200M_050219_1,10574,LPARLTQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10575 55.133 246.0 376710.0 25 0 22181.0 + 25208 MTVEKVQGI 9 147 502.7752066729368 1003.5358604126736 2 502.7755309939384 MULTI CID FTMS 0 0 0 10558 314068.0 1.0 0 0.0 17 Unmodified _MTVEKVQGI_ ENSG00000278311|ENST00000613102|GGNBP2;nc|ENSG00000278311|Q9H3C7-3|GGNBP2 49.93300154707207 0.0405168250806675 3 MTVE 4 5 50.165 0.0 0.0 4.9988 0.0 0.0 0.0 540.3154390924436 540.3154390924436 30.28991563746841 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + MTVE 4.9988 + + 1013 + 1 1.582 73968.2 1.0 5253 5320 10558 HBL1_DMSO_200M_050219_1,10575 HBL1_DMSO_200M_050219_1,10575,MTVEKVQGI True True MTVEKVQGI 55.132743 502.775530993938 1982089.375 10558.0 nc|ENSG00000278311|Q9H3C7-3|GGNBP2;;ENSG00000278311|ENST00000613102|GGNBP2 5.310083389282227 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10576 55.143 609.0 157280.0 25 0 14929.0 -1 0 101 918.4197275791412 1834.824902225082 2 918.9211303591728 MULTI CID FTMS 0 0 0 10558 289893.375 0.216247725300182 9 -0.6744880676269531 18 3 [NP]{I|L}[TA]PPMQDAN{I|L}DV[HC] 17 -1 + 73.991 0.0 0.0 4.0326 4.0326 74.27 0.0 0.0 0.0 10.326285113148124 5.309904512618957 5.309904512618957 3.0102999566398125 0 0.6382104921644451 0.958607314841775 0.3494850021680094 0.0 [NP]{I|L}[TA]PPMQDAN{I|L}DV[HC];[NP]{I|L}[TA]PNNQDAN{I|L}DV[HC];[NP]{I|L}[TA]NPNQDAN{I|L}DV[HC];[NP]{I|L}[TP]APMQDAN{I|L}DV[HC];[NP]{I|L}[TA]PPMQDAGG{I|L}DV[HC];[NP]{I|L}[TA]PPM[AG]DAN{I|L}DV[HC];[NP]{I|L}N[TA]PNQDAN{I|L}DV[HC];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NADQNP[YT]{I|L}{[QS]|[NT]};EEVD{I|L}NADQNP[YT]{I|L}{[QS]|[NT]};[NP]{I|L}[TP]ANNQDAN{I|L}DV[HC] 4.0326;3.8685;3.7045;3.6085;3.5422;3.5422;3.5404;3.4698;3.4646;3.4444 -;-;-;-;-;-;-;-;-;- 12852 1 1.582 67479.1 1.0 5254 5320 10558 HBL1_DMSO_200M_050219_1,10576 HBL1_DMSO_200M_050219_1,10576, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10577 55.148 191.0 855400.0 25 0 106540.0 + 36169 SVVGNLHRL 9 144 332.19802975468167 993.5722598642452 3 332.1968566775322 MULTI CID FTMS 0 0 0 10558 265579.28125 0.2248681410818982 -2 0.1876716613769531 19 Unmodified _SVVGNLHRL_ ENSG00000111641|ENST00000322166|NOP2;ENST00000536506.5_1_12:6669839-6672276:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 46.020951573049366 0.0490941689151868 3 [VS]VGN{I|L}H{I|L}R 9 2 + 73.281 0.0 0.0 7.3755 7.3755 89.394 0.0 0.0 0.0 47.97995155844489 8.627528741402273 8.627528741402273 6.94537812595911 0 0.4247425010840047 2.0 0.0 1.1861818737241734 [VS]VGN{I|L}H{I|L}R;[VS]V{I|L}GNH{I|L}R;[VS]VG{I|L}NH{I|L}R;[VS]VGGG{I|L}H{I|L}R;[VS]RN{I|L}H{I|L}R;[VS]V{I|L}GGGH{I|L}R;[VS]VG{I|L}GGH{I|L}R;[VS]R{I|L}NH{I|L}R;[VS]{I|L}VGNH{I|L}R;[VS]RGG{I|L}H{I|L}R 7.3755;6.6764;6.672;6.4487;6.3403;5.7497;5.7452;5.6368;5.5101;5.4081 -;-;-;-;-;-;-;-;-;- 380 + 1 1.582 134048.0 1.0 5255 5320 10558 HBL1_DMSO_200M_050219_1,10577 HBL1_DMSO_200M_050219_1,10577,SVVGNLHRL True True SVVGNLHRL 55.148249 332.196856677532 4959055.5 10558.0 ENSG00000111641|ENST00000322166|NOP2;;nc|ENSG00000111641|P46087-2|NOP2;;ENST00000536506.5_1_12:6669839-6672276:-|nuORF;;nc|ENSG00000111641|P46087-4|NOP2;;nc|ENSG00000111641|P46087-3|NOP2 4.648899078369141 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10578 55.157 502.0 158370.0 25 0 21784.0 -1 0 106 595.3109269243873 594.3036504577873 1 595.3115722537041 MULTI CID FTMS 0 0 0 10558 261834.0625 1.0 0 0.0 20 3 {I|L} 1 -1 10.379 0.0 0.0 1.7463 0.0 0.0 463.2082505327857 0.0 463.2082505327857 0.0 1.170416030166841 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.7463 - 34 + 1 1.582 62960.4 1.0 5256 5320 10558 HBL1_DMSO_200M_050219_1,10578 HBL1_DMSO_200M_050219_1,10578, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10580 55.167 397.0 511790.0 25 0 22475.0 -1 QGFEFFCSQSL 11 169 675.2966734829922 1348.5787940327843 2 675.2969238162041 MULTI CID FTMS 0 0 0 10579 344365.3125 0.8824334901098204 1 -0.108245849609375 1 Carbamidomethyl (C) _QGFEFFC(Carbamidomethyl (C))SQSL_ ENSG00000169154|ENST00000307599|GOT1L1 12.240655878213236 0.7805268987462184 3 [PS]{I|L}CDEAQQNA 11 -1 72.594 0.0 0.0 5.383 0.0 0.0 0.0 189.0647920599312 189.0647920599312 52.92264083954136 0.0 0.0 0.0 0 0.8494850021680094 0.7695510786217261 0.0709991640913002 1.274227503252014 [PS]{I|L}CDEAQQNA 5.383 - 5370 1 1.569 148817.1 1.0 5257 5321 10579 HBL1_DMSO_200M_050219_1,10580 HBL1_DMSO_200M_050219_1,10580,QGFEFFCSQSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10581 55.169 82.0 1206900.0 25 0 160480.0 + + -1 YQLENYCN 8 121 523.7159743633074 1045.4173957934147 2 523.7162353396416 MULTI CID FTMS 0 0 0 10579 1296365.125 0.4692101085575237 -1 0.0718269348144531 2 Oxidation (M) _YNEFVNM(Oxidation (M))N_ ENSG00000254647|ENST00000381330|INS 12.531546534597751 0.7257836412119636 3 [YN]E{I|L}QYCN 8 -1 [YN]E{I|L}QY + + 25.886 28.479 3.5144 2.4761 2.4761 49.34 0.0 0.0 0.0 0.0 -6.444021793654855 -6.444021793654855 0.0 0 0.0 0.0 0.0 0.6421590589602532 [YN]E{I|L}QYCN 2.4761 - 538 + 1 1.569 80804.2 1.0 5258 5321 10579 HBL1_DMSO_200M_050219_1,10581 HBL1_DMSO_200M_050219_1,10581,YNEFVNMN False False YQLENYCN 55.169339 523.716235339642 12649735.0 10579.0 ENSG00000254647|ENST00000381330|INS 6.227749029795329 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10582 55.174 257.0 1102600.0 25 0 256480.0 + 32399 RYVPRASYF 9 164 579.8060589913505 1157.5975650495009 2 579.8065063357353 MULTI CID FTMS 0 0 0 10579 886025.1875 0.2375823352902035 -3 0.2594985961914062 3 Unmodified _RYVPRASYF_ ENSG00000112576|ENST00000372991|CCND3;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;nc|ENSG00000112576|P30281-3|CCND3 53.832793166522166 0.0319663582346103 3 R[DG]SA{I|L}[KQ]H{M(Oxidation (M))|F} 10 8 + 29.231 0.0 0.0 2.5252 2.5252 74.348 0.0 0.0 0.0 3.3631095373108586 0.8015290567822575 0.8015290567822575 5.564498472148657 0 0.8252574989159953 0.0 0.0 1.305462187404089 R[DG]SA{I|L}[KQ]H{M(Oxidation (M))|F};{M(Oxidation (M))|F}[HM]A{I|L}[KQ]H{M(Oxidation (M))|F};{M(Oxidation (M))|F}Y{[RE]|[WV]}R[{I|L}A]G{M(Oxidation (M))|F};{M(Oxidation (M))|F}Y{[RE]|[WV]}R[Q{I|L}]{M(Oxidation (M))|F};R[RK]AE{[QS]|[NT]}H{M(Oxidation (M))|F};{M(Oxidation (M))|F}Y{[RE]|[WV]}R{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L} 2.5252;2.0445;1.6795;1.5321;1.3488;0.61579 -;-;-;-;-;- 512 + 1 1.569 213546.7 1.0 5259 5321 10579 HBL1_DMSO_200M_050219_1,10582 HBL1_DMSO_200M_050219_1,10582,RYVPRASYF True True RYVPRASYF 55.174126 579.8081 48013894.0 10579.0 ENST00000510058.1_1_6:41904922-41909441:-|nuORF;;nc|ENSG00000112576|P30281-3|CCND3;;ENSG00000112576|ENST00000372991|CCND3 9.440446694691977 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10583 55.18 308.0 761370.0 25 0 65563.0 + -1 GQTQVEIKV 9 188 501.2850054252217 500.2777289586217 1 501.2856323122978 MULTI CID FTMS 0 0 0 10579 683015.5625 0.4295527187693437 -1 0.0718269348144531 4 ENST00000507097.5_1_5:137893182-137909502:-|nuORF;ENSG00000113013|ENST00000297185|HSPA9;ENST00000432228.1_1_2:222827655-222828180:+|nuORF 3 {[QG]|[NA]}T 3 -1 25.805 0.0 0.0 5.1582 0.0 0.0 0.0 211.1263061893436 211.1263061893436 4.805657866489934 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.25 0.6694451763165201 {[QG]|[NA]}T 5.1582 - 234 1 1.569 175356.1 1.0 5260 5321 10579 HBL1_DMSO_200M_050219_1,10583 HBL1_DMSO_200M_050219_1,10583, False False GQTQVEIKV 55.179736 501.2858 10047123.0 10579.0 ENST00000507097.5_1_5:137893182-137909502:-|nuORF;;ENSG00000113013|ENST00000297185|HSPA9;;ENST00000432228.1_1_2:222827655-222828180:+|nuORF 6.955983638763428 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10584 55.181 57.0 3105800.0 25 0 594920.0 + 32400 RYVPRASYF 9 103 386.8733484128607 1157.5982158387822 3 386.8733398318291 MULTI CID FTMS 0 0 0 10579 567781.75 0.2540276397040335 -3 0.2594985961914062 5 Unmodified _RYVPRASYF_ ENSG00000112576|ENST00000372991|CCND3;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;nc|ENSG00000112576|P30281-3|CCND3 13.90604991867851 0.4602628045680013 3 VGPV[RV]{M(Oxidation (M))|F} 7 7 37.479 0.0 0.0 3.2376 0.0 0.0 385.1263691804609 0.0 385.1263691804609 0.0 26.369638510539914 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.8494850021680094 VGPV[RV]{M(Oxidation (M))|F} 3.2376 - 734 + 1 1.569 141146.2 1.0 5261 5321 10579 HBL1_DMSO_200M_050219_1,10584 HBL1_DMSO_200M_050219_1,10584,RYVPRASYF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10585 55.184 112.0 898420.0 25 0 67703.0 -1 0 135 338.19588050581564 337.18860403921565 1 338.1935607790947 MULTI CID FTMS 0 0 0 10579 398528.0 0.8283075790339373 1 -0.108245849609375 6 3 V 1 -1 9.0344 0.0 0.0 2.6793 0.0 0.0 220.1090808842336 0.0 220.1090808842336 0.0 7.440583195105626 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.6793 - 15 + 1 1.569 84674.2 1.0 5262 5321 10579 HBL1_DMSO_200M_050219_1,10585 HBL1_DMSO_200M_050219_1,10585, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10586 55.192 476.0 253080.0 25 0 16244.0 -1 0 96 869.4519889064776 0 869.4528686404228 PEAK CID FTMS 0 0 0 10579 340152.90625 1.0 0 0.0 7 3 {I|L}G 2 -1 7.4743 0.0 0.0 0.43032 0.0 0.0 1270.6338229283865 293.1258333795532 1563.7596563079394 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}G 0.43032 - 734 + 1 1.569 88460.8 1.0 5263 5321 10579 HBL1_DMSO_200M_050219_1,10586 HBL1_DMSO_200M_050219_1,10586, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10587 55.197 252.0 507550.0 25 0 56487.0 + 44487 YPAPPPLG 8 146 406.2214075174781 810.4282621017561 2 406.2211181521416 MULTI CID FTMS 0 0 0 10579 322733.4375 0.6637811358605659 4 -0.3929176330566406 8 Unmodified _YPAPPPLG_ REV__ENST00000510377.5_1_4:144106452-144106728:+|nuORF 32.45364647766026 0.3613649037604678 3 {[HG]|PP}APY 5 -1 22.39 0.0 0.0 2.7627 0.0 0.0 0.0 282.1451095352426 282.1451095352426 -0.99842299170394 0.0 -0.99842299170394 0.0 0 0.5 0.721246399047171 0.0 0.0 {[HG]|PP}APY 2.7627 - 126 1 1.569 101033.3 1.0 5264 5321 10579 HBL1_DMSO_200M_050219_1,10587 HBL1_DMSO_200M_050219_1,10587,YPAPPPLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10588 55.205 467.0 328770.0 25 0 23580.0 -1 MDWRPTWRPIQ 11 136 751.3712434661035 1500.7279339990068 2 751.3718749880791 MULTI CID FTMS 0 0 0 10579 309650.59375 1.0 0 0.0 9 Oxidation (M) _M(Oxidation (M))DWRPTWRPIQ_ ENST00000379933.7_1_6:7211827-7211938:+|nuORF 23.78978130925829 0.5336113198261219 3 PN{I|L}NEAQ[{I|L}A]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 13 -1 + 114.72 0.0 0.0 7.6441 7.6441 83.725 0.0 0.0 0.0 24.75264052139508 13.319884478471067 13.319884478471067 1.923195118548577 0 2.25 1.5228787452803376 0.3252574989159953 1.9291746928241125 PN{I|L}NEAQ[{I|L}A]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;PN{I|L}NEA[{M(Oxidation (M))|F}V]G{[WN]|[YH]}{I|L}Q;PN{I|L}NEA[R{M(Oxidation (M))|F}]{[WN]|[YH]}{I|L}Q;PN{I|L}NEARRE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[NP]{I|L}DHH{I|L}NPG{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NRR[DG]DG{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NRR[CS]PG{M(Oxidation (M))|F}{I|L}Q;PN{I|L}NEAQ[{I|L}A]QQ[{M(Oxidation (M))|F}E];[NP]EVHH{I|L}NPG{M(Oxidation (M))|F}{I|L}Q;PN{I|L}N[HV]{I|L}YE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 7.6441;7.5159;7.4091;7.2015;5.9947;5.9187;5.8808;5.7113;5.461;5.4166 -;-;-;-;-;-;-;-;-;- 5175 + 1 1.569 109896.4 1.0 5265 5321 10579 HBL1_DMSO_200M_050219_1,10588 HBL1_DMSO_200M_050219_1,10588,MDWRPTWRPIQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10589 55.215 564.0 467880.0 25 0 35278.0 + 44704 YPGSVLAGSL 10 221 482.2599404963338 962.5053280594676 2 482.2613098025322 MULTI CID FTMS 0 0 0 10579 172115.65625 1.0 0 0.0 10 Unmodified _YPGSVLAGSL_ REV__ENSG00000160190|ENST00000352133|SLC37A1;REV__ENST00000496416.1_1_21:43985963-43995993:+|nuORF 13.90604991867851 0.6142120002215601 3 YP 2 -1 29.182 0.0 0.0 3.0319 0.0 0.0 0.0 699.3681734674436 699.3681734674436 8.827119187379036 0.0 0.0 0.0 0 0.25 0.9208187539523752 0.0 0.0 YP 3.0319 + + 835 + 1 1.569 203880.5 1.0 5266 5321 10579 HBL1_DMSO_200M_050219_1,10589 HBL1_DMSO_200M_050219_1,10589,YPGSVLAGSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10590 55.227 674.0 463660.0 25 0 32008.0 + 21151 LPASIVSR 8 228 421.7582333338648 841.5019137345296 2 421.7578613162041 MULTI CID FTMS 0 0 0 10579 158746.765625 0.3582943697900345 -3 0.2594985961914062 11 Unmodified _LPASIVSR_ ENST00000265734.8_1_7:92354947-92354992:-|nuORF 24.020572477871973 0.5389365498350341 3 {I|L}PAS 4 4 50.533 0.0 0.0 6.005 0.0 0.0 0.0 470.27390466861567 470.27390466861567 35.13161545382659 0.0 0.0 0.0 0 0.3505762035186219 1.6989700043360187 0.3494850021680094 0.0 + {I|L}PAS 6.005 + + 610 + 1 1.569 241458.0 1.0 5267 5321 10579 HBL1_DMSO_200M_050219_1,10590 HBL1_DMSO_200M_050219_1,10590,LPASIVSR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10591 55.237 542.0 305800.0 25 0 26488.0 + -1 MLSALELCI 9 198 533.2719090992596 1064.529265265319 2 534.2751342654228 MULTI CID FTMS 0 0 0 10579 134946.953125 0.3282092673176784 -3 0.2594985961914062 12 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LSALELC(Carbamidomethyl (C))I_ REV__ENST00000380008.1_1_21:47251066-47256320:-|nuORF 19.438996006549623 0.310492472477042 3 C(Carbamidomethyl (C))PV{[{M(Oxidation (M))|F}C]|[YS]}R 6 -1 30.45 0.0 0.0 2.8605 0.0 0.0 0.0 299.1438387506469 299.1438387506469 4.55811971878282 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.3494850021680094 C(Carbamidomethyl (C))PV{[{M(Oxidation (M))|F}C]|[YS]}R 2.8605 - 751 + 1 1.569 129492.3 1.0 5268 5321 10579 HBL1_DMSO_200M_050219_1,10591 HBL1_DMSO_200M_050219_1,10591,MLSALELCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10592 55.249 651.0 292710.0 25 0 40729.0 32100 RVLQEVREL 9 196 571.3354918412964 1140.6564307493927 2 571.3347656130791 MULTI CID FTMS 0 0 0 10579 128985.0078125 1.0 0 0.0 13 Unmodified _RVLQEVREL_ ENSG00000023902|ENST00000369124|PLEKHO1;nc|ENSG00000023902|Q53GL0-2|PLEKHO1 21.59015148037692 0.2564810811560323 3 {I|L}{M(Oxidation (M))|F}RV 4 7 40.75 0.0 0.0 3.5725 0.0 0.0 0.0 622.3342109254787 622.3342109254787 21.876079288928945 0.0 0.0 0.0 0 0.5 1.154901959985743 0.0 0.3054621874040891 {I|L}{M(Oxidation (M))|F}RV 3.5725 - 960 + 1 1.569 145737.2 1.0 5269 5321 10579 HBL1_DMSO_200M_050219_1,10592 HBL1_DMSO_200M_050219_1,10592,RVLQEVREL False True RIGPEKIDTL 55.248618 571.334765613079 939715.0625 10579.0 ENSG00000116977|ENST00000366584|LGALS8;;ENST00000366583.6_1_1:236689310-236706138:+|nuORF;;nc|ENSG00000116977|O00214-2|LGALS8 1.7228641659021378 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10593 55.254 290.0 402020.0 25 0 34317.0 + 3747 DAGALLHVS 9 126 441.7378784285679 881.4612039239358 2 441.7377807497978 MULTI CID FTMS 0 0 0 10579 112335.3203125 0.1898533013081266 -3 0.2594985961914062 14 Unmodified _DAGALLHVS_ REV__nc|ENSG00000111266|Q9BY84-2|DUSP16 57.47134341890925 0.0274820932774257 3 {[DA]|[EG]}Q 3 -1 33.596 0.0 0.0 3.8114 0.0 0.0 0.0 564.3150301780952 564.3150301780952 2.8989737310192183 0.0 0.0 0.0 0 0.5 2.0 0.4158850665378676 0.0 {[DA]|[EG]}Q 3.8114 - 355 1 1.569 93833.8 1.0 5270 5321 10579 HBL1_DMSO_200M_050219_1,10593 HBL1_DMSO_200M_050219_1,10593,DAGALLHVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10594 55.265 656.0 162030.0 25 0 56600.0 + 24178 LYYDSYTSSV 10 123 599.2695437075225 0 599.2682372927666 PEAK CID FTMS 0 0 0 10579 88592.09375 0.3747012577244754 1 -0.108245849609375 15 Unmodified _LYYDSYTSSV_ nc|ENSG00000211698|A0A0C4DH28|TRGV4 11.640296217721598 0.3623705791714445 3 M 1 10 11.237 0.0 0.0 0.93915 0.0 0.0 184.14521426875743 878.3214205377561 1062.4666348065136 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 M 0.93915 - 124 + 1 1.569 83459.7 1.0 5271 5321 10579 HBL1_DMSO_200M_050219_1,10594 HBL1_DMSO_200M_050219_1,10594,LYYDSYTSSV False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10596 55.27 3.7 18344000.0 25 0 1182500.0 + 4958 DGPRVFRV 8 85 315.84712001612127 944.519530648564 3 315.8471252322197 MULTI CID FTMS 0 0 0 10595 12957603.0 0.5578198074029149 2 -0.1632537841796875 1 Unmodified _DGPRVFRV_ ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF;nc|ENSG00000179115|Q9Y285-2|FARSA 28.486842064014134 0.4448922141344407 3 DGVPGVVH 8 5 76.716 0.0 0.0 8.1222 0.0 0.0 0.0 181.0989168756469 181.0989168756469 65.67651247905808 0.0 0.0 0.0 0 0.2215141619232908 2.0 0.0 0.0 DGVPGVVH 8.1222 - 225 + 1 1.556 59936.1 1.0 5272 5322 10595 HBL1_DMSO_200M_050219_1,10596 HBL1_DMSO_200M_050219_1,10596,DGPRVFRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10597 55.271 2.6 22744000.0 25 0 3090700.0 + 36174 SVVPDVRSV 9 57 479.27178049125456 956.5290080493093 2 479.2720519900322 MULTI CID FTMS 0 0 0 10595 23584830.0 1.0 0 0.0 2 Unmodified _SVVPDVRSV_ chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1;ENSG00000073584|ENST00000348513|SMARCE1;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;nc|ENSG00000073584|Q969G3-2|SMARCE1;nc|ENSG00000073584|Q969G3-3|SMARCE1;nc|ENSG00000073584|Q969G3-4|SMARCE1;nc|ENSG00000073584|Q969G3-5|SMARCE1;nc|ENSG00000073584|Q969G3-6|SMARCE1 18.373094154950223 0.3393451798331396 3 [VS]VPDV 6 3 53.901 0.0 0.0 5.6351 0.0 0.0 0.0 357.1890963190063 357.1890963190063 46.91122510072759 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + [VS]VPDV 5.6351 + + 21 + 1 1.556 50323.1 1.0 5273 5322 10595 HBL1_DMSO_200M_050219_1,10597 HBL1_DMSO_200M_050219_1,10597,SVVPDVRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10598 55.272 3.1 17177000.0 25 0 2377000.0 + 21884 LPPEVNRI 8 61 469.276764901342 936.538976869484 2 469.2772704958916 MULTI CID FTMS 0 0 0 10595 17093058.0 0.9556448772397728 1 -0.0667037963867187 3 Unmodified _LPPEVNRI_ ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 14.838274106304384 0.6917062315640577 3 {I|L}PPE 4 4 56.186 0.0 0.0 5.9993 0.0 0.0 0.0 497.2840670221313 497.2840670221313 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPE 5.9993 + + 21 + 1 1.556 48963.5 1.0 5274 5322 10595 HBL1_DMSO_200M_050219_1,10598 HBL1_DMSO_200M_050219_1,10598,LPPEVNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10599 55.273 8.8 8333100.0 25 0 1526100.0 4960 DGPRVFRV 8 59 473.267010056436 944.519467179672 2 473.2671996951103 MULTI CID FTMS 0 0 0 10595 5785254.5 0.3208977208333721 2 -0.1632537841796875 4 Unmodified _DGPRVFRV_ ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF;nc|ENSG00000179115|Q9Y285-2|FARSA 8.593279151180031 0.7721714526254883 3 DV 2 6 20.969 0.0 0.0 2.2201 0.0 0.0 0.0 727.4020265190733 727.4020265190733 10.791812460476253 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV 2.2201 - 10 + 1 1.556 66232.5 1.0 5275 5322 10595 HBL1_DMSO_200M_050219_1,10599 HBL1_DMSO_200M_050219_1,10599,DGPRVFRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10600 55.274 21.0 2165500.0 25 0 237800.0 + 22080 LPPPTPSQI 9 87 475.271559301882 948.528565670564 2 475.2717773318291 MULTI CID FTMS 0 0 0 10595 2000878.5 0.7349118369035744 -7 0.5986976623535156 5 Unmodified _LPPPTPSQI_ ENSG00000083223|ENST00000375963|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 54.773552608820026 0.0299037012502309 3 [{I|L}P]H[WR]Q{I|L} 7 5 + 37.809 0.0 0.0 3.986 3.986 77.988 0.0 0.0 0.0 7.371666398017993 4.443700562261554 4.443700562261554 6.1928031367991565 0 0.2614393726401688 2.0 0.0 0.0 [{I|L}P]H[WR]Q{I|L};[{I|L}P][YT][KS]Q{I|L};[{I|L}P]HNP{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{I|L}P]H[WR][AG]{I|L};[{I|L}P]HGGP{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[WR]Q{I|L};[VP][YK]{[DS]|[MA]|[CV]|TT}Q{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[WR][AG]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}NP{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 3.986;3.3331;3.0628;3.0023;2.0863;1.5902;1.4808;0.60653;0.26558 -;-;-;-;-;-;-;-;- 393 1 1.556 39983.1 1.0 5276 5322 10595 HBL1_DMSO_200M_050219_1,10600 HBL1_DMSO_200M_050219_1,10600,LPPPTPSQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10601 55.275 15.0 3940000.0 25 0 384770.0 + 967 AFPDGRSSF 9 72 492.23294159170655 982.4513302502132 2 492.2334472537041 MULTI CID FTMS 0 0 0 10595 1895746.0 0.9957725211114594 -4 0.3677444458007812 6 Unmodified _AFPDGRSSF_ ENSG00000110446|ENST00000227880|SLC15A3 13.90604991867851 0.4602628045680013 3 A{M(Oxidation (M))|F}{[QS]|[NT]}DP{[CP]|[EA]} 8 7 21.872 0.0 0.0 2.2263 0.0 0.0 119.0740452497086 0.0 119.0740452497086 0.0 6.298793729568857 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 A{M(Oxidation (M))|F}{[QS]|[NT]}DP{[CP]|[EA]} 2.2263 - 104 1 1.556 49288.6 1.0 5277 5322 10595 HBL1_DMSO_200M_050219_1,10601 HBL1_DMSO_200M_050219_1,10601,AFPDGRSSF False True AFPDGRSSF 55.275421 492.233447253704 171434712.0 10595.0 ENSG00000110446|ENST00000227880|SLC15A3 3.690077622731527 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10602 55.277 40.0 1432900.0 25 0 220710.0 + -1 SHVAVENALG 10 79 519.7643305715953 1037.5141082099906 2 519.7650024294853 MULTI CID FTMS 0 0 0 10595 1319804.625 1.0 0 0.0 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SHVAVENALG_ ENST00000480592.5_1_X:41193505-41196960:+|nuORF;nc|ENSG00000215301|O00571-2|DDX3X;ENSG00000215301|ENST00000644876|DDX3X 19.361941925380144 0.5226674314761524 3 {[YC]|[HE]}VAVENA{[VA]|[{I|L}G]} 10 -1 + 50.406 0.0 0.0 4.8584 4.8584 83.278 0.0 0.0 0.0 4.938331324631378 43.4163750790475 4.938331324631378 9.164539485499256 0 0.5 0.0 0.0 0.0 {[YC]|[HE]}VAVENA{[VA]|[{I|L}G]};{[YC]|[HE]}VAVEGGA{[VA]|[{I|L}G]};{[YC]|[HE]}VAVE{I|L}{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NEV[{M(Oxidation (M))|F}T]{[VA]|[{I|L}G]};[{I|L}A][HD]VENA{[VA]|[{I|L}G]};{[YC]|[HE]}[R{I|L}]ENA{[VA]|[{I|L}G]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EV[{M(Oxidation (M))|F}T]{[VA]|[{I|L}G]};[{I|L}A][HV]DENA{[VA]|[{I|L}G]};[YV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AANA{[VA]|[{I|L}G]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GGEV[{M(Oxidation (M))|F}T]{[VA]|[{I|L}G]} 4.8584;3.975;3.4567;3.0018;2.7609;2.7116;2.7116;2.4708;2.4485;2.1143 -;-;-;-;-;-;-;-;-;- 257 1 1.556 50217.8 1.0 5278 5322 10595 HBL1_DMSO_200M_050219_1,10602 HBL1_DMSO_200M_050219_1,10602,SHVAVENALG False False SHVAVENALG 55.276598 519.765002429485 8010672.5 10595.0 ENST00000480592.5_1_X:41193505-41196960:+|nuORF;;nc|ENSG00000215301|O00571-2|DDX3X;;ENSG00000215301|ENST00000644876|DDX3X 8.386708577473959 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10603 55.28 145.0 492730.0 25 0 38856.0 + 41666 VPQLQNNTI 9 103 513.7823147081691 1025.550076483138 2 513.7830688357353 MULTI CID FTMS 0 0 0 10595 668787.8125 0.7163314949200575 -2 0.1800727844238281 8 Unmodified _VPQLQNNTI_ ENSG00000107581|ENST00000369144|EIF3A;ENST00000369144.7_1_10:120819204-120820315:-|nuORF;nc|ENSG00000107581|Q14152-2|EIF3A 57.47134341890925 0.0274820932774257 3 [VP]Q{I|L}QNNT{I|L} 9 0 + 59.403 0.0 0.0 5.7923 5.7923 76.302 0.0 0.0 0.0 0.7530272850235065 10.330145895351848 0.7530272850235065 0.7530272850235065 0 0.7429928190999391 1.3010299956639813 0.0 0.6109243748081782 + + [VP]Q{I|L}QNNT{I|L};[AG]P{I|L}VQNNT{I|L};[AG]PV{I|L}QNNT{I|L};[AG]P{I|L}QVNNT{I|L};[QP]{I|L}VQNNT{I|L};[AG]P{I|L}QNVNT{I|L};[QP]V{I|L}QNNT{I|L};[VP]AAVQNNT{I|L};[VP]Q{I|L}[AG]NNT{I|L};[VP]Q{I|L}QGGNT{I|L} 5.7923;5.7189;5.4253;5.4253;5.4043;5.1318;5.1107;4.9635;4.8944;4.8944 +;-;-;-;-;-;-;-;-;- + 1764 1 1.556 61639.3 1.0 5279 5322 10595 HBL1_DMSO_200M_050219_1,10603 HBL1_DMSO_200M_050219_1,10603,VPQLQNNTI True True VPQLQNNTI 55.279511 513.783068835735 6520778.0 10595.0 ENST00000369144.7_1_10:120819204-120820315:-|nuORF;;ENSG00000107581|ENST00000369144|EIF3A;;nc|ENSG00000107581|Q14152-2|EIF3A 5.267452875773112 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10604 55.286 367.0 769140.0 25 0 121590.0 + -1 LGHGGACG 8 219 364.6591361539472 0 364.6591369509697 PEAK CID FTMS 0 0 0 10595 635890.6875 1.0 0 0.0 9 Carbamidomethyl (C) _LGHGGAC(Carbamidomethyl (C))G_ REV__ENST00000399583.3_1_7:4917808-4923299:-|nuORF 6.354104778181461 0.5763711549229614 3 NV{M(Oxidation (M))|F}VT 5 -1 13.659 0.0 0.0 1.878 0.0 0.0 97.95020436834734 66.03576837711171 163.98597274545904 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 NV{M(Oxidation (M))|F}VT 1.878 - 145 + 1 1.556 219550.3 1.0 5280 5322 10595 HBL1_DMSO_200M_050219_1,10604 HBL1_DMSO_200M_050219_1,10604,LGHGGACG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10605 55.288 82.0 639470.0 25 0 40748.0 43515 WWWWIWWQWW 10 76 874.9044782998504 1747.7944036665008 2 874.9113036990166 MULTI CID FTMS 0 0 0 10595 608392.9375 0.1459359344844631 -7 0.5986976623535156 10 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 3 [NP]{I|L}NA[QP]QDAN{I|L}D 13 12 34.451 0.0 0.0 1.9711 0.0 0.0 0.0 354.0893004773008 354.0893004773008 13.372157233640568 0.0 0.0 0.0 0 0.242992819099939 0.0 0.0 0.3494850021680094 [NP]{I|L}NA[QP]QDAN{I|L}D 1.9711 - 494 1 1.556 41083.9 1.0 5281 5322 10595 HBL1_DMSO_200M_050219_1,10605 HBL1_DMSO_200M_050219_1,10605,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 10606 55.291 155.0 656410.0 25 0 58474.0 + 38637 TTIKAFFPKK 10 129 394.2412955003985 1179.7020571013954 3 394.2418701052666 MULTI CID FTMS 0 0 0 10595 591890.625 0.0199433579782647 5 -0.39874267578125 11 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 32.78568957990786 0.2337485590374503 3 TT{I|L}KY{I|L}WKK 9 4 + 85.064 0.0 0.0 7.2106 7.2106 95.971 0.0 0.0 0.0 63.89304678578446 15.674100046527355 15.674100046527355 85.06395920923487 0 0.6694451763165201 1.5228787452803376 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK 7.2106 - 256 + 1 1.556 88825.8 1.0 5282 5322 10595 HBL1_DMSO_200M_050219_1,10606 HBL1_DMSO_200M_050219_1,10606,TTIKAFFPKK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10607 55.294 173.0 796490.0 25 0 81675.0 + 4173 DAPIGPHL 8 110 410.22171120493886 818.4288694766777 2 410.2215148806572 MULTI CID FTMS 0 0 0 10595 532923.9375 0.0696941438755213 -4 0.3677444458007812 12 Unmodified _DAPIGPHL_ ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A 45.7499826716795 0.1592378023510922 3 {[DA]|[EG]}P{I|L}GPH{I|L} 8 0 + 64.404 0.0 0.0 7.8692 7.8692 88.691 0.0 0.0 0.0 36.05265951879794 12.5190243216651 12.5190243216651 5.013487579716767 0 0.7059771852360797 2.0 0.0 0.0 + + {[DA]|[EG]}P{I|L}GPH{I|L};{[DA]|[EG]}{I|L}PGPH{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}P{I|L}{[DA]|[EG]};[PG]H{I|L}P{I|L}{[DA]|[EG]} 7.8692;7.2567;2.1976;0.60804 +;-;-;- + 130 + 1 1.556 109647.4 1.0 5283 5322 10595 HBL1_DMSO_200M_050219_1,10607 HBL1_DMSO_200M_050219_1,10607,DAPIGPHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10608 55.296 86.0 593000.0 25 0 45573.0 9814 FPCRQRPL 8 73 508.7786536302368 1015.5427543272737 2 508.7806884646416 MULTI CID FTMS 0 0 0 10595 471600.09375 0.3600176258594288 11 -0.8269195556640625 13 Unmodified _FPCRQRPL_ ENSG00000275572|ENST00000614228|GRIFIN 14.581692164780916 0.6954967302934248 3 YTPE 4 7 38.928 0.0 0.0 3.8332 0.0 0.0 507.2992726056656 0.0 507.2992726056656 0.0 26.16369046023241 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 YTPE 3.8332 - 53 1 1.556 48570.2 1.0 5284 5322 10595 HBL1_DMSO_200M_050219_1,10608 HBL1_DMSO_200M_050219_1,10608,FPCRQRPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10609 55.298 47.0 725060.0 25 0 51241.0 8766 EVSTLWTA 8 70 453.732901458913 905.451249984626 2 453.7327453494072 MULTI CID FTMS 0 0 0 10595 446689.3125 1.0 0 0.0 14 Unmodified _EVSTLWTA_ ENST00000520378.1_1_5:150518646-150537284:-|nuORF 20.871210003555333 0.6025813472596342 3 TA 2 6 14.82 0.0 0.0 1.6368 0.0 0.0 715.3554228135307 0.0 715.3554228135307 0.0 4.362591709212181 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 + TA 1.6368 + + 43 + 1 1.556 32599.9 1.0 5285 5322 10595 HBL1_DMSO_200M_050219_1,10609 HBL1_DMSO_200M_050219_1,10609,EVSTLWTA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10610 55.3 93.0 659530.0 25 0 57937.0 + -1 VALLNKTNV 9 105 486.3020495149375 970.589546096675 2 486.2978393435478 MULTI CID FTMS 0 0 0 10595 418200.28125 0.2463609392990499 -4 0.3677444458007812 15 Carbamidomethyl (C) _VAILAVC(Carbamidomethyl (C))LL_ ENSG00000168036|ENST00000349496|CTNNB1 28.17323086031832 0.1727213568982648 3 {[VA]|[{I|L}G]}{I|L} 3 -1 33.429 0.0 0.0 3.4442 0.0 0.0 0.0 684.3765083371625 684.3765083371625 13.66331909749148 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 {[VA]|[{I|L}G]}{I|L} 3.4442 + + 480 1 1.556 50507.5 1.0 5286 5322 10595 HBL1_DMSO_200M_050219_1,10610 HBL1_DMSO_200M_050219_1,10610,VAILAVCLL False False VALLNKTNV 55.299632 486.297839343548 4267557.5 10595.0 ENSG00000168036|ENST00000349496|CTNNB1 3.371692180633545 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10611 55.31 594.0 162770.0 25 0 46547.0 -1 0 39 1123.1145076809817 3366.3216936431454 3 1123.782763659954 MULTI CID FTMS 0 0 0 10595 334742.90625 0.3927181142209205 2 -0.1632537841796875 16 3 {M(Oxidation (M))|F}D 2 -1 8.5835 0.0 0.0 0.25498 0.0 0.0 1999.6766146912976 1101.5403536432252 3101.216968334523 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}D 0.25498 - 9 + 1 1.556 81562.2 1.0 5287 5322 10595 HBL1_DMSO_200M_050219_1,10611 HBL1_DMSO_200M_050219_1,10611, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10612 55.32 549.0 263640.0 25 0 22533.0 + + 23807 LPSYRHTITV 10 175 396.22418492516215 1185.6507253756863 3 396.2242919802666 MULTI CID FTMS 0 0 0 10595 309411.96875 0.9206800576444232 1 -0.0667037963867187 17 Unmodified _LVDVEDALLSL_ ENSG00000064313|ENST00000378164|TAF2 34.40172386719151 0.2986346176549658 3 {I|L}V{M(Oxidation (M))|F}P{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}H]|[RQ]}TV 10 -1 + 41.961 0.0 0.0 3.539 3.539 76.165 0.0 0.0 0.0 6.53212513775344 5.440680443502757 5.440680443502757 5.440680443502757 0 0.0 0.0 1.0356668758921828 0.0 {I|L}V{M(Oxidation (M))|F}P{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}H]|[RQ]}TV;{I|L}V{M(Oxidation (M))|F}P{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}H]|[RQ]}S{I|L};[{M(Oxidation (M))|F}V]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}H]|[RQ]}TV;{I|L}VH{I|L}[{M(Oxidation (M))|F}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;[{M(Oxidation (M))|F}V]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))K]PV;[{M(Oxidation (M))|F}V]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}H]|[RQ]}S{I|L};{I|L}VY{I|L}G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]{I|L};{I|L}VH{I|L}[{M(Oxidation (M))|F}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};{I|L}VYG{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]{I|L};[{M(Oxidation (M))|F}V]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}[RV][DN] 3.539;3.0802;2.439;2.216;2.2002;1.9801;1.8715;1.7571;1.6843;1.6089 -;-;-;-;-;-;-;-;-;- 828 + 1 1.556 116971.6 1.0 5288 5322 10595 HBL1_DMSO_200M_050219_1,10612 HBL1_DMSO_200M_050219_1,10612,LVDVEDALLSL False False LPSYRHTITV 55.319703 396.2248 3144991.75 10595.0 ENSG00000064313|ENST00000378164|TAF2 5.524616877237956 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10613 55.332 704.0 155570.0 25 0 9153.4 + 38065 TPHAPIIT 8 159 425.24503787348254 0 425.2449523806572 PEAK CID FTMS 0 0 0 10595 145402.78125 1.0 0 0.0 18 Unmodified _TPHAPIIT_ REV__ENSG00000182348|ENST00000333190|ZNF804B 16.942295170755138 0.4635191396245973 3 E 1 -1 9.8708 0.0 0.0 1.1634 0.0 0.0 650.3746449834902 66.03576837711171 716.4104133606019 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.1643943297944484 0.0 E 1.1634 - 60 + 1 1.556 89546.3 1.0 5289 5322 10595 HBL1_DMSO_200M_050219_1,10613 HBL1_DMSO_200M_050219_1,10613,TPHAPIIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10615 55.336 5.3 9936600.0 25 0 2375100.0 + 28778 PYFRYPFL 8 81 368.194404519104 1101.5613841575118 3 368.1943237185478 MULTI CID FTMS 0 0 0 10614 7272135.5 0.4118277710814853 12 -0.952850341796875 1 Unmodified _PYFRYPFL_ REV__ENST00000415383.5_1_10:99230613-99236467:-|nuORF 19.438996006549623 0.6237395211498085 3 QE{M(Oxidation (M))|F}{I|L} 4 -1 32.652 0.0 0.0 2.9641 0.0 0.0 566.2977162091812 0.0 566.2977162091812 0.0 18.047444008242906 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 QE{M(Oxidation (M))|F}{I|L} 2.9641 - 239 1 1.552 46725.0 1.0 5290 5323 10614 HBL1_DMSO_200M_050219_1,10615 HBL1_DMSO_200M_050219_1,10615,PYFRYPFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10616 55.337 7.8 5797100.0 25 0 1262900.0 15398 IPPDQQRLI 9 55 540.3145428572215 1078.6145327812428 2 540.3145019412041 MULTI CID FTMS 0 0 0 10614 6035666.5 0.1158868912933184 12 -0.952850341796875 2 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 13.042465956692816 0.4836390050082244 3 {I|L}PPD 4 5 56.186 0.0 0.0 5.2091 0.0 0.0 0.0 653.3743990533811 653.3743990533811 50.70107520596089 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPD 5.2091 + + 11 + 1 1.552 43935.2 1.0 5291 5323 10614 HBL1_DMSO_200M_050219_1,10616 HBL1_DMSO_200M_050219_1,10616,IPPDQQRLI False True LPPDLVNVRG 55.337408 540.314501941204 1839860224.0 10614.0 ENSG00000087448|ENST00000381271|KLHL42 3.71661647160848 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10617 55.339 16.0 3409500.0 25 0 331960.0 + 9930 FPGKHFQEI 9 96 551.7873955743806 1101.5602382155612 2 551.7878295779228 MULTI CID FTMS 0 0 0 10614 3464545.5 0.262926366557875 12 -0.952850341796875 3 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 47.7319792270244 0.0453426645642791 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E 9 3 + 60.09 0.0 0.0 5.455 5.455 74.879 0.0 0.0 0.0 17.49037159853401 35.86873447409921 17.49037159853401 0.5546218740408904 0 1.0994850021680094 1.6989700043360187 0.9247425010840048 0.3807196863200844 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQE{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]E{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}E{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QD]|[EN]|[WG]|[KD]|[RS]}[VS]HQ{M(Oxidation (M))|F}{I|L}E;{[QD]|[EN]|[WG]|[KD]|[RS]}[VS]HQE{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[YK]PE 5.455;5.4047;5.1534;4.6191;4.5688;4.3175;3.4451;3.2881;3.2378;3.233 -;-;-;-;-;-;-;-;-;- 361 1 1.552 46750.2 1.0 5292 5323 10614 HBL1_DMSO_200M_050219_1,10617 HBL1_DMSO_200M_050219_1,10617,FPGKHFQEI True True FPGKHFQEI 55.338588 551.787829577923 145732000.0 10614.0 ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 6.489758014678955 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10618 55.34 14.0 3695900.0 25 0 458400.0 + 44728 YPIMITTFV 9 54 542.7931421868918 1083.5717314405836 2 542.7931396365166 MULTI CID FTMS 0 0 0 10614 3148386.0 0.0662628551647162 12 -0.952850341796875 4 Unmodified _YPIMITTFV_ REV__ENSG00000170456|ENST00000389082|DENND5B;REV__nc|ENSG00000170456|Q6ZUT9-2|DENND5B 11.494710602746466 0.5255349189887087 3 YPSS{M(Oxidation (M))|F} 5 -1 56.186 0.0 0.0 5.1852 0.0 0.0 0.0 499.2993258111938 499.2993258111938 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPSS{M(Oxidation (M))|F} 5.1852 - 27 + 1 1.552 49099.4 1.0 5293 5323 10614 HBL1_DMSO_200M_050219_1,10618 HBL1_DMSO_200M_050219_1,10618,YPIMITTFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10619 55.341 26.0 1096100.0 25 0 102550.0 + 41599 VPPLATNTV 9 57 456.263596554667 910.512640176134 2 456.2643005251884 MULTI CID FTMS 0 0 0 10614 1603303.375 0.1601222746163635 6 -0.4277114868164062 5 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 19.438996006549623 0.310492472477042 3 TV 2 7 14.024 0.0 0.0 1.5402 0.0 0.0 692.3857918868747 0.0 692.3857918868747 0.0 0.2114406948358294 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + TV 1.5402 + + 51 + 1 1.552 28468.0 1.0 5294 5323 10614 HBL1_DMSO_200M_050219_1,10619 HBL1_DMSO_200M_050219_1,10619,VPPLATNTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10620 55.342 37.0 2725000.0 25 0 256020.0 3938 DALKNWIK 8 99 329.8590105895294 986.5552023687884 3 329.8587829470634 MULTI CID FTMS 0 0 0 10614 1257681.0 0.0290844564137733 -15 1.202117919921875 6 Unmodified _DALKNWIK_ ENSG00000114757|ENST00000467460|PEX5L;nc|ENSG00000114757|Q8IYB4-2|PEX5L;nc|ENSG00000114757|Q8IYB4-3|PEX5L;nc|ENSG00000114757|Q8IYB4-4|PEX5L;nc|ENSG00000114757|Q8IYB4-5|PEX5L;nc|ENSG00000114757|Q8IYB4-6|PEX5L;nc|ENSG00000114757|Q8IYB4-7|PEX5L;nc|ENSG00000114757|Q8IYB4-8|PEX5L 11.640296217721598 0.738950129755968 3 [{I|L}P]PK 4 6 12.132 0.0 0.0 1.2298 0.0 0.0 0.0 548.246787128753 548.246787128753 1.023242030462601 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 [{I|L}P]PK 1.2298 - 112 1 1.552 87445.6 1.0 5295 5323 10614 HBL1_DMSO_200M_050219_1,10620 HBL1_DMSO_200M_050219_1,10620,DALKNWIK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10621 55.343 40.0 909380.0 25 0 54142.0 + 38051 TPESKIRFV 9 64 359.54213475329954 1075.6045748600986 3 359.5414306521416 MULTI CID FTMS 0 0 0 10614 989301.4375 0.2241002280187625 2 -0.2179679870605468 7 Unmodified _TPESKIRFV_ ENSG00000093144|ENST00000454859|ECHDC1;ENST00000475319.1_1_6:127611016-127636085:-|nuORF;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1 19.62595529434964 0.305431704817896 3 TPESK{I|L}R[{M(Oxidation (M))|F}V] 9 0 + 54.843 0.0 0.0 5.0988 5.0988 87.396 0.0 0.0 0.0 48.61096540919935 4.762036441594191 4.762036441594191 18.750612633917 0 0.5 0.0 0.0 0.0 + + TPESK{I|L}R[{M(Oxidation (M))|F}V];TPEV[KT]R[{M(Oxidation (M))|F}V];TV[EP][KT]R[{M(Oxidation (M))|F}V] 5.0988;3.3555;1.9912 +;-;- + 71 + 1 1.552 40496.2 1.0 5296 5323 10614 HBL1_DMSO_200M_050219_1,10621 HBL1_DMSO_200M_050219_1,10621,TPESKIRFV False True TPESKIRFV 55.343302 359.541430652142 54638096.0 10614.0 nc|ENSG00000093144|Q9NTX5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;;ENST00000475319.1_1_6:127611016-127636085:-|nuORF;;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;;ENSG00000093144|ENST00000454859|ECHDC1 4.48082701365153 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10622 55.345 44.0 953440.0 25 0 183810.0 + 14937 ILMEHIHKL 9 86 378.5547595158914 1132.6424491478742 3 378.5547363162041 MULTI CID FTMS 0 0 0 10614 787497.25 0.0497390035363765 5 -0.3376998901367187 8 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 19.62595529434964 0.305431704817896 3 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 56.944 0.0 0.0 5.0275 5.0275 87.287 0.0 0.0 0.0 36.97843051804455 6.188711477281501 6.188711477281501 19.668212980798486 0 0.0 1.5228787452803376 0.4247425010840047 0.0 + + {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQK{I|L};{I|L}{I|L}[YV]EQQK{I|L} 5.0275;3.291;3.1154 +;-;- + 256 + 1 1.552 41592.3 1.0 5297 5323 10614 HBL1_DMSO_200M_050219_1,10622 HBL1_DMSO_200M_050219_1,10622,ILMEHIHKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10623 55.346 63.0 945710.0 25 0 56314.0 11657 GLDHFFQI 8 102 488.7463658334003 975.4781787336008 2 488.7460510134697 MULTI CID FTMS 0 0 0 10614 679655.5625 0.2916427798888492 -6 0.5695114135742188 9 Unmodified _GLDHFFQI_ ENSG00000152270|ENST00000282096|PDE3B;ENST00000534317.1_1_11:14665864-14793584:+|nuORF;nc|ENSG00000152270|Q13370-2|PDE3B 46.92087301778293 0.1537303740847981 3 {[VA]|[{I|L}G]}D{[WT]|[RM]}TNG{I|L} 9 5 + 50.63 0.0 0.0 5.1903 5.1903 76.376 0.0 0.0 0.0 2.007046801327732 14.09256854528806 2.007046801327732 2.007046801327732 0 1.2302046884880935 1.3010299956639813 1.1549471895720984 0.0 {[VA]|[{I|L}G]}D{[WT]|[RM]}TNG{I|L};[R{M(Oxidation (M))|F}][DP]GTNG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTNG{I|L};{[VA]|[{I|L}G]}D{[WT]|[RM]}TGGG{I|L};[R{M(Oxidation (M))|F}][DP]GTGGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTGGG{I|L};{[VA]|[{I|L}G]}D{[WT]|[RM]}G{[SA]|[TG]}G{I|L};[R{M(Oxidation (M))|F}][DP]GG{[SA]|[TG]}G{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GG{[SA]|[TG]}G{I|L};{[VA]|[{I|L}G]}D{[WT]|[RM]}GQS{I|L} 5.1903;4.9846;4.9034;4.2463;4.0406;3.9594;3.7076;3.5018;3.4206;3.2013 -;-;-;-;-;-;-;-;-;- 799 1 1.552 49066.7 1.0 5298 5323 10614 HBL1_DMSO_200M_050219_1,10623 HBL1_DMSO_200M_050219_1,10623,GLDHFFQI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10624 55.348 100.0 644870.0 25 0 69815.0 + 43274 WHDETLLP 8 101 505.7524556931607 1009.4903584531214 2 505.7524902224541 MULTI CID FTMS 0 0 0 10614 542796.1875 0.2176244954768828 12 -0.952850341796875 10 Unmodified _WHDETLLP_ REV__ENST00000372886.5_1_20:43211320-43218439:+|nuORF;REV__ENST00000372891.7_1_20:43211320-43213781:+|nuORF 19.438996006549623 0.6237395211498085 3 {I|L}P 2 -1 45.217 0.0 0.0 4.4791 0.0 0.0 0.0 796.3310747518581 796.3310747518581 13.416739180071032 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P 4.4791 + + 319 + 1 1.552 57135.6 1.0 5299 5323 10614 HBL1_DMSO_200M_050219_1,10624 HBL1_DMSO_200M_050219_1,10624,WHDETLLP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10625 55.352 224.0 527420.0 25 0 52592.0 + 4575 DAYSFSRKI 9 121 362.85756516731504 1085.5508661021452 3 362.8573181033134 MULTI CID FTMS 0 0 0 10614 402358.03125 0.0174499885223132 14 -1.0778160095214844 11 Unmodified _DAYSFSRKI_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000538600.1_1_12:6631091-6632090:+|nuORF 26.268140514670165 0.1969607489560049 3 {[DA]|[EG]}YS{M(Oxidation (M))|F}S 6 3 48.923 0.0 0.0 4.5067 0.0 0.0 0.0 412.2688997858032 412.2688997858032 30.04890997020229 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.4247425010840047 0.0 + {[DA]|[EG]}YS{M(Oxidation (M))|F}S 4.5067 + + 269 + 1 1.552 98889.9 1.0 5300 5323 10614 HBL1_DMSO_200M_050219_1,10625 HBL1_DMSO_200M_050219_1,10625,DAYSFSRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10626 55.361 501.0 486280.0 25 0 28799.0 -1 MDNITRQNQFY 11 162 744.3308442092342 1486.6471354852683 2 744.3308593630791 MULTI CID FTMS 0 0 0 10614 343418.6875 0.158842174557773 3 -0.2909812927246094 12 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 13.042465956692816 0.7638483625850725 3 [NP]{I|L}DM{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y 12 -1 + 104.15 0.0 0.0 7.0057 7.0057 89.967 0.0 0.0 0.0 13.082792450674532 9.877203139966326 9.877203139966326 9.098233696509126 0 0.7429928190999391 1.5228787452803376 0.7783773187068795 1.5114393726401687 [NP]{I|L}DM{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;[NP]{I|L}DM{M(Oxidation (M))|F}[AG]QNA{M(Oxidation (M))|F}Y;[NP]{I|L}DM{M(Oxidation (M))|F}QQGGA{M(Oxidation (M))|F}Y;[NP]{I|L}DM{M(Oxidation (M))|F}Q[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QV]|[N{I|L}]|[RA]|[KV]}PDM{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQ{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;[NP]{I|L}DM{M(Oxidation (M))|F}[AG][AG]NA{M(Oxidation (M))|F}Y 7.0057;6.3937;6.3937;6.3937;6.1257;5.9138;5.8986;5.8433;5.7927;5.7835 -;-;-;-;-;-;-;-;-;- 39955 1 1.552 172129.3 1.0 5301 5323 10614 HBL1_DMSO_200M_050219_1,10626 HBL1_DMSO_200M_050219_1,10626,MDNITRQNQFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10627 55.366 227.0 514880.0 25 0 71108.0 + 22021 LPPPPPPAM 9 122 458.7515933437354 915.4886337542708 2 458.7516662478447 MULTI CID FTMS 0 0 0 10614 353243.8125 0.0504727356366116 29 -2.590492248535156 13 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 3 [{I|L}P]PPPP 6 3 55.495 0.0 0.0 6.0618 0.0 0.0 0.0 314.1170151040499 314.1170151040499 33.5314535825796 0.0 0.0 0.0 0 1.610924374808178 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 6.0618 + + 433 1 1.552 93230.3 1.0 5302 5323 10614 HBL1_DMSO_200M_050219_1,10627 HBL1_DMSO_200M_050219_1,10627,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10628 55.367 78.0 657260.0 25 0 76817.0 + + 41974 KLHGVNINV 9 90 497.29421568732175 992.5738784414436 2 497.2956115603447 MULTI CID FTMS 0 0 0 10614 343816.46875 0.5647216280959368 1 -0.0965499877929687 14 Unmodified _VQLRAAPAPA_ ENSG00000173914|ENST00000310046|RBM4B;nc|ENSG00000173933|Q9BWF3-4|RBM4;ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4 7.289230182591677 0.6929195370588109 3 NA{I|L}{[NV]|[RG]}T{I|L} 7 -1 13.531 0.0 0.0 1.3632 0.0 0.0 249.14379445603475 0.0 249.14379445603475 0.0 2.110884632217047 0.0 0.0 0 0.0 0.0 0.0 0.0 NA{I|L}{[NV]|[RG]}T{I|L} 1.3632 - 88 + 1 1.552 46738.4 1.0 5303 5323 10614 HBL1_DMSO_200M_050219_1,10628 HBL1_DMSO_200M_050219_1,10628,VQLRAAPAPA False False KLHGVNINV 55.367317 497.295611560345 3443957.25 10614.0 ENSG00000173914|ENST00000310046|RBM4B;;nc|ENSG00000173933|Q9BWF3-4|RBM4;;ENSG00000173933|ENST00000310092|RBM4;;nc|ENSG00000173933|Q9BWF3-3|RBM4;;nc|ENSG00000173933|Q9BWF3-2|RBM4 2.743358373641968 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10629 55.377 541.0 468390.0 25 0 81439.0 + 17263 KLPEKWESV 9 162 558.3083439989884 1114.6021350647768 2 558.3092529177666 MULTI CID FTMS 0 0 0 10614 249137.65625 0.0851037581157234 -3 0.2467765808105468 15 Unmodified _KLPEKWESV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 45.739877483867886 0.0497104363764649 3 K{I|L}PE[YG]VNPV 10 5 + 55.628 0.0 0.0 4.9908 4.9908 72.769 0.0 0.0 0.0 0.0633462390661776 5.039237471316298 0.0633462390661776 0.3477251345862626 0 0.8807196863200843 0.6989700043360187 0.4247425010840047 0.0 K{I|L}PE[YG]VNPV;K{I|L}PEK[WE]SV;K{I|L}PE{[DS]|[MA]|[CV]|TT}[Q{I|L}]SV;K{I|L}PE{[DS]|[MA]|[CV]|TT}TN{I|L}V;K{I|L}PE[YG]VGGPV;K{I|L}PE{[DS]|[MA]|[CV]|TT}TVVQ;[EP]KWE{I|L}KSV;K{I|L}PE[YG]V[PG]GV;K{I|L}PE[YG]{I|L}[PA]Q;K{I|L}PEK{[C(Carbamidomethyl (C))E]|[WC]}{I|L}V 4.9908;4.9596;4.5244;4.2607;4.1686;4.072;4.0297;4.022;3.9548;3.9155 -;+;-;-;-;-;-;-;-;- + 4668 + 1 1.552 191633.4 1.0 5304 5323 10614 HBL1_DMSO_200M_050219_1,10629 HBL1_DMSO_200M_050219_1,10629,KLPEKWESV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10630 55.387 566.0 451920.0 25 0 35081.0 + -1 LMDHTIPEV 9 233 535.6954274419571 1069.3763019507142 2 535.6945068240166 MULTI CID FTMS 0 0 0 10614 236614.609375 1.0 0 0.0 16 Oxidation (M) _STM(Oxidation (M))AEGNQCN_ nc|ENSG00000137575|O00560-2|SDCBP;ENSG00000137575|ENST00000260130|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP 13.042465956692816 0.6287021003332052 3 [EP]V[EC]NYCN 9 -1 + 39.971 0.0 0.0 3.7378 3.7378 73.507 0.0 0.0 0.0 17.2854616248753 6.49674684468792 6.49674684468792 3.0102999566398125 0 0.5924778212679485 1.6989700043360187 0.2215141619232908 0.25 [EP]V[EC]NYCN;[EP]D{[ES]|[DT]|[{I|L}C]}NYCN;[EP]V[EC]GGYCN;[EP][C(Carbamidomethyl (C))M][PG]YCN;[EP]D{[ES]|[DT]|[{I|L}C]}GGYCN;[YQ]{[YC]|[HE]}NYCN;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{[YC]|[HE]}NYCN;[DP]{I|L}[EC]NYCN;{NN|[MP]|[D{I|L}]|[EV]}P[EC]NYCN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[C(Carbamidomethyl (C))H]NYCN 3.7378;3.4563;2.643;2.5325;2.3615;2.1214;1.8236;1.711;1.6037;1.5644 -;-;-;-;-;-;-;-;-;- 2079 1 1.552 203892.3 1.0 5305 5323 10614 HBL1_DMSO_200M_050219_1,10630 HBL1_DMSO_200M_050219_1,10630,STMAEGNQCN False False LMDHTIPEV 55.386771 535.694506824017 1741486.125 10614.0 nc|ENSG00000137575|O00560-2|SDCBP;;ENSG00000137575|ENST00000260130|SDCBP;;nc|ENSG00000137575|O00560-3|SDCBP 5.9832390149434405 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10631 55.391 214.0 423460.0 25 0 28319.0 + 13956 HYQAIVTAY 9 109 533.2719090992596 1064.529265265319 2 533.2709228396416 MULTI CID FTMS 0 0 0 10614 217651.015625 0.1436844038618675 -3 0.2467765808105468 17 Unmodified _HYQAIVTAY_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 46.020951573049366 0.0490941689151868 3 {[WN]|[YH]}QA{I|L}VTAY 9 0 + 67.641 0.0 0.0 6.3541 6.3541 88.004 0.0 0.0 0.0 9.062507179574196 8.697114610913488 8.697114610913488 9.062507179574196 0 1.3935078169319297 1.154901959985743 0.5 0.3054621874040891 + + {[WN]|[YH]}QA{I|L}VTAY;{NN|[MP]|[D{I|L}]|[EV]}{[CP]|[EA]}A{I|L}VTAY;{[WN]|[YH]}QAV{I|L}TAY;{[WN]|[YH]}[AG]A{I|L}VTAY;[YQ]HA{I|L}VTAY;{NN|[MP]|[D{I|L}]|[EV]}{[CP]|[EA]}AV{I|L}TAY;{[WN]|[YH]}[AG]AV{I|L}TAY;[AG]YHA{I|L}VTAY;[YQ]HAV{I|L}TAY;[AG]YHAV{I|L}TAY 6.3541;5.5028;5.5016;5.4891;5.1038;4.6503;4.6366;4.5414;4.2513;3.9758 +;-;-;-;-;-;-;-;-;- + 504 1 1.552 78214.7 1.0 5306 5323 10614 HBL1_DMSO_200M_050219_1,10631 HBL1_DMSO_200M_050219_1,10631,HYQAIVTAY True True HYQAIVTAY 55.390831 533.270922839642 24764378.0 10614.0 ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 7.139119466145833 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10632 55.402 661.0 153250.0 25 0 16920.0 -1 NWNCKMNQFY 10 115 710.7921309741857 1419.5697090151714 2 710.7916137576103 MULTI CID FTMS 0 0 0 10614 147034.171875 0.3916090868481804 3 -0.2909812927246094 18 Carbamidomethyl (C),Oxidation (M) _NWNC(Carbamidomethyl (C))KM(Oxidation (M))NQFY_ ENST00000244230.6_1_2:71360149-71360302:+|nuORF 7.289230182591677 0.6929195370588109 3 [AG]N{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y 13 -1 + 75.297 0.0 0.0 5.3042 5.3042 77.978 0.0 0.0 0.0 2.963011620327464 10.696083918116416 2.963011620327464 2.963011620327464 0 0.8182503180159344 1.0 0.4247425010840047 1.416386562212267 [AG]N{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;[AG]N{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQNA{M(Oxidation (M))|F}Y;[AG]N{M(Oxidation (M))|F}[CS]AQ[AG]NA{M(Oxidation (M))|F}Y;[AG]N{M(Oxidation (M))|F}[CS]A[AG]QNA{M(Oxidation (M))|F}Y;[AG]N{M(Oxidation (M))|F}[CS]AQQGGA{M(Oxidation (M))|F}Y;[AG]GG{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]A[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQ[AG]NA{M(Oxidation (M))|F}Y 5.3042;5.0955;4.8363;4.6651;4.6651;4.6651;4.6643;4.6298;4.4546;4.4546 -;-;-;-;-;-;-;-;-;- 1959 1 1.552 77145.6 1.0 5307 5323 10614 HBL1_DMSO_200M_050219_1,10632 HBL1_DMSO_200M_050219_1,10632,NWNCKMNQFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10633 55.415 648.0 286190.0 25 0 27781.0 + 45832 YYPEHTSVL 9 197 554.7694517048278 1107.5243504764555 2 554.7686035037041 MULTI CID FTMS 0 0 0 10614 143153.625 0.7258688164144117 2 -0.2179679870605468 19 Unmodified _YYPEHTSVL_ ENSG00000100852|ENST00000345122|ARHGAP5;nc|ENSG00000100852|Q13017-2|ARHGAP5 30.22481116460888 0.1466181017706357 3 YY{NN|[MP]|[D{I|L}]|[EV]}{I|L}GDH{I|L} 9 5 + 58.087 0.0 0.0 5.2448 5.2448 83.094 0.0 0.0 0.0 23.82106425931605 7.269987279362624 7.269987279362624 7.269987279362624 0 0.3807196863200844 2.0 0.6989700043360187 0.0 YY{NN|[MP]|[D{I|L}]|[EV]}{I|L}GDH{I|L};YY{NN|[MP]|[D{I|L}]|[EV]}{I|L}GD{I|L}H;YY{NN|[MP]|[D{I|L}]|[EV]}{[RE]|[WV]}H{I|L};YYHT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{I|L};YY{NN|[MP]|[D{I|L}]|[EV]}{[RE]|[WV]}{I|L}H;YY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VRTY;YYHT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}H;YY{NN|[MP]|[D{I|L}]|[EV]}{I|L}[WH]V;YY{NN|[MP]|[D{I|L}]|[EV]}{I|L}VWH;YY{NN|[MP]|[D{I|L}]|[EV]}{I|L}[YK]M 5.2448;4.5884;4.5724;4.3408;3.9159;3.8495;3.6843;3.3904;3.2848;3.2628 -;-;-;-;-;-;-;-;-;- 3844 + 1 1.552 145907.3 1.0 5308 5323 10614 HBL1_DMSO_200M_050219_1,10633 HBL1_DMSO_200M_050219_1,10633,YYPEHTSVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10634 55.428 790.0 114280.0 25 0 12934.0 + 43812 YFCNCSSAQIC 11 150 619.7365258209372 1237.4584987086744 2 619.7371093630791 MULTI CID FTMS 0 0 0 10614 119010.53125 0.3135748952811813 1 -0.0965499877929687 20 Unmodified _YFCNCSSAQIC_ REV__ENSG00000146839|ENST00000613979|ZAN;REV__nc|ENSG00000146839|Q9Y493-2|ZAN;REV__nc|ENSG00000146839|Q9Y493-3|ZAN;REV__nc|ENSG00000146839|Q9Y493-4|ZAN;REV__nc|ENSG00000146839|Q9Y493-5|ZAN;REV__nc|ENSG00000146839|Q9Y493-6|ZAN;REV__nc|ENSG00000146839|Q9Y493-7|ZAN 6.2057823575117 0.8458686499021061 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q 3 -1 22.676 0.0 0.0 1.8325 0.0 0.0 0.0 872.2752461054118 872.2752461054118 7.983324797206279 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q 1.8325 - 697 1 1.552 70466.4 1.0 5309 5323 10614 HBL1_DMSO_200M_050219_1,10634 HBL1_DMSO_200M_050219_1,10634,YFCNCSSAQIC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10636 55.433 25.0 1814300.0 25 0 135930.0 + 25019 MPQNRTIYV 9 68 561.2918750284074 1120.569197123615 2 561.2918578982353 MULTI CID FTMS 0 0 0 10635 1785636.0 0.2604898250766439 2 -0.1944313049316406 1 Unmodified _MPQNRTIYV_ ENSG00000166801|ENST00000675163|FAM111A 38.61474834105838 0.0830609365873449 3 MPQNKE{I|L}Y 8 3 67.02 0.0 0.0 5.9809 0.0 0.0 0.0 114.0565432184203 114.0565432184203 40.82177864628136 0.0 0.0 0.0 0 1.5924778212679485 2.0 0.0 0.3494850021680094 MPQNKE{I|L}Y 5.9809 - 80 + 1 1.552 40360.5 1.0 5310 5324 10635 HBL1_DMSO_200M_050219_1,10636 HBL1_DMSO_200M_050219_1,10636,MPQNRTIYV True True MPQNRTIYV 55.432781 561.291857898235 99188440.0 10635.0 ENSG00000166801|ENST00000675163|FAM111A 6.949464480082194 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10637 55.434 7.3 4677200.0 25 0 814270.0 + 41833 VPYEPPQV 8 61 464.74259170090994 927.47063046862 2 464.7428161501884 MULTI CID FTMS 0 0 0 10635 10661412.0 1.0 0 0.0 2 Unmodified _VPYEPPQV_ ENSG00000073282|ENST00000264731|TP63;ENSG00000078900|ENST00000378295|TP73;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;ENST00000603364.5_1_1:3607439-3646013:+|nuORF;nc|ENSG00000073282|Q9H3D4-10|TP63;nc|ENSG00000073282|Q9H3D4-11|TP63;nc|ENSG00000073282|Q9H3D4-12|TP63;nc|ENSG00000073282|Q9H3D4-2|TP63;nc|ENSG00000073282|Q9H3D4-3|TP63;nc|ENSG00000073282|Q9H3D4-4|TP63;nc|ENSG00000073282|Q9H3D4-5|TP63;nc|ENSG00000073282|Q9H3D4-6|TP63;nc|ENSG00000073282|Q9H3D4-7|TP63;nc|ENSG00000073282|Q9H3D4-8|TP63;nc|ENSG00000073282|Q9H3D4-9|TP63;nc|ENSG00000078900|O15350-10|TP73;nc|ENSG00000078900|O15350-11|TP73;nc|ENSG00000078900|O15350-12|TP73;nc|ENSG00000078900|O15350-13|TP73;nc|ENSG00000078900|O15350-2|TP73;nc|ENSG00000078900|O15350-3|TP73;nc|ENSG00000078900|O15350-4|TP73;nc|ENSG00000078900|O15350-5|TP73;nc|ENSG00000078900|O15350-6|TP73;nc|ENSG00000078900|O15350-8|TP73;nc|ENSG00000078900|O15350-9|TP73;TBL1XR1-TP73|1|fusion;TBL1XR1-TP73|2|fusion;TBL1XR1-TP73|3|fusion;TBL1XR1-TP73|4|fusion;TBL1XR1-TP73|5|fusion;TBL1XR1-TP73|6|fusion 26.34127834903884 0.4900704351052977 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVP 5 4 35.207 0.0 0.0 3.796 0.0 0.0 0.0 339.1666762482624 339.1666762482624 20.60280296969276 0.0 0.0 0.0 0 0.3494850021680094 1.0457574905606752 0.3807196863200844 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVP 3.796 - 91 1 1.552 33063.9 1.0 5311 5324 10635 HBL1_DMSO_200M_050219_1,10637 HBL1_DMSO_200M_050219_1,10637,VPYEPPQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10638 55.435 44.0 1856900.0 25 0 266820.0 + 44623 YPFKPPKV 8 80 325.86048683472575 974.5596311043772 3 325.8601562380791 MULTI CID FTMS 0 0 0 10635 1034881.0625 0.0134169338844856 -43 4.166881561279297 3 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPP{[QV]|[N{I|L}]|[RA]|[KV]} 8 0 + 48.599 0.0 0.0 4.9867 4.9867 87.963 0.0 0.0 0.0 33.984484532805155 2.140012553530965 2.140012553530965 32.90730039024169 0 0.3807196863200844 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPP{[QV]|[N{I|L}]|[RA]|[KV]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T][KP]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.9867;1.6101;0.012656 +;-;- + 147 + 1 1.552 70375.6 1.0 5312 5324 10635 HBL1_DMSO_200M_050219_1,10638 HBL1_DMSO_200M_050219_1,10638,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10639 55.438 119.0 831720.0 25 0 56774.0 + 35330 STAAKIMGV 9 115 439.2443584897241 876.4741640462481 2 439.2443420290947 MULTI CID FTMS 0 0 0 10635 901338.5 0.3867489747867645 -2 0.1632537841796875 4 Unmodified _STAAKIMGV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 71.13359017698441 0.0206607516130725 3 AAK{I|L}YAA 7 5 41.755 0.0 0.0 4.7639 0.0 0.0 0.0 185.05710643608123 185.05710643608123 22.686655356721715 0.0 0.0 0.0 0 1.0114393726401687 0.7695510786217261 0.0 0.0 AAK{I|L}YAA 4.7639 - 355 1 1.552 81763.2 1.0 5313 5324 10635 HBL1_DMSO_200M_050219_1,10639 HBL1_DMSO_200M_050219_1,10639,STAAKIMGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10640 55.439 46.0 677660.0 25 0 69988.0 27012 PELPKIVVR 9 55 350.89403885258827 1049.6602871579648 3 350.8938171267509 MULTI CID FTMS 0 0 0 10635 761529.6875 0.6311728489391436 -2 0.1632537841796875 5 Unmodified _PELPKIVVR_ ENST00000567100.5_2_16:68057196-68071937:+|nuORF 4.5288652416199255 0.7565837746943351 3 [EP]V 3 6 24.437 0.0 0.0 2.3281 0.0 0.0 0.0 721.4665975429835 721.4665975429835 4.6040937697618745 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [EP]V 2.3281 - 20 1 1.552 39193.2 1.0 5314 5324 10635 HBL1_DMSO_200M_050219_1,10640 HBL1_DMSO_200M_050219_1,10640,PELPKIVVR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10641 55.441 80.0 528380.0 25 0 37454.0 + 33218 SFLRGTTSY 9 80 516.2614603556917 1030.5083677781834 2 516.2618896365166 MULTI CID FTMS 0 0 0 10635 737388.3125 0.2891111739083812 2 -0.1944313049316406 6 Unmodified _SFLRGTTSY_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 26.268140514670165 0.1969607489560049 3 ESY 3 7 33.416 0.0 0.0 3.2427 0.0 0.0 633.3566761701187 0.0 633.3566761701187 0.0 16.889042093317045 0.0 0.0 0 1.0 0.0 0.5 0.0 ESY 3.2427 - 41 1 1.552 38411.4 1.0 5315 5324 10635 HBL1_DMSO_200M_050219_1,10641 HBL1_DMSO_200M_050219_1,10641,SFLRGTTSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10642 55.447 337.0 584510.0 25 0 51876.0 + -1 YFYGGLMTTQF 11 127 672.3044815370328 1342.5944101408654 2 672.3044311404228 MULTI CID FTMS 0 0 0 10635 620176.6875 0.6349489737969402 -5 0.411285400390625 7 Oxidation (M) _YFYGGLM(Oxidation (M))TTQF_ REV__ENSG00000156006|ENST00000286479|NAT2 36.506200033944 0.2662161991516171 3 [DP]S{I|L}E[KS]E{M(Oxidation (M))|F}[YE] 11 -1 + 50.811 0.0 0.0 3.7845 3.7845 69.457 0.0 0.0 0.0 0.5065027903086161 2.498873840759863 0.5065027903086161 0.5065027903086161 0 0.3807196863200844 1.6989700043360187 1.7530834337684311 0.8494850021680094 [DP]S{I|L}E[KS]E{M(Oxidation (M))|F}[YE];[PS]D{I|L}E[KS]E{M(Oxidation (M))|F}[YE];[PS]{I|L}DE[KS]E{M(Oxidation (M))|F}[YE];[DP]RENQQ{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[DP]RENQ[RH][YE];[DP]RE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{M(Oxidation (M))|F}[YE];[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}E[KS]{M(Oxidation (M))|F}TQ{M(Oxidation (M))|F};[DP]RV[VS]CE{M(Oxidation (M))|F}[YE];[DP]RENQ[AG]{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[DP]REGGQQ{M(Oxidation (M))|F}Y{M(Oxidation (M))|F} 3.7845;3.7468;3.6423;3.5984;3.3538;3.2184;3.0915;2.9634;2.9158;2.9158 -;-;-;-;-;-;-;-;-;- 4049 1 1.552 141436.0 1.0 5316 5324 10635 HBL1_DMSO_200M_050219_1,10642 HBL1_DMSO_200M_050219_1,10642,YFYGGLMTTQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10643 55.453 328.0 361360.0 25 0 26530.0 + -1 PCACRYLEV 9 137 584.2699654187046 1166.525377904209 2 584.2697631716728 MULTI CID FTMS 0 0 0 10635 606045.375 1.0 0 0.0 8 2 Carbamidomethyl (C) _PC(Carbamidomethyl (C))AC(Carbamidomethyl (C))RYLEV_ REV__ENSG00000184347|ENST00000519560|SLIT3;REV__nc|ENSG00000184347|O75094-2|SLIT3;REV__nc|ENSG00000184347|O75094-3|SLIT3;REV__nc|ENSG00000184347|O75094-4|SLIT3 10.073929032068715 0.563993802247229 3 {[WT]|[RM]}{I|L}GQ{I|L}C(Carbamidomethyl (C)) 7 -1 29.104 0.0 0.0 2.4949 0.0 0.0 0.0 305.08480108219663 305.08480108219663 7.632761652981461 0.0 0.0 0.0 0 0.5 0.0 0.0 0.5554621874040891 {[WT]|[RM]}{I|L}GQ{I|L}C(Carbamidomethyl (C)) 2.4949 - 454 1 1.552 92124.8 1.0 5317 5324 10635 HBL1_DMSO_200M_050219_1,10643 HBL1_DMSO_200M_050219_1,10643,PCACRYLEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10644 55.455 96.0 815690.0 25 0 106370.0 + 22042 LPPPPPPHL 9 84 482.7845332676538 963.5545136021076 2 482.7844116091728 MULTI CID FTMS 0 0 0 10635 597229.4375 0.2355890288457091 -16 1.2986679077148438 9 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 56.04830969593885 0.0282699710924866 3 {I|L}PPPPPPH{I|L} 9 0 + 83.548 0.0 0.0 8.6709 8.6709 96.644 0.0 0.0 0.0 76.55870172828347 10.084406814122218 10.084406814122218 17.447274948966935 0 0.7742275032520141 2.0 0.0 0.0 + + {I|L}PPPPPPH{I|L};{I|L}PPP[YK]H{I|L};{I|L}PP[YK]PH{I|L};{I|L}P[YK]PPH{I|L};{I|L}[YK]PPPH{I|L};{I|L}[YK][YK]H{I|L} 8.6709;6.8601;6.8601;6.0023;3.4858;1.6822 +;-;-;-;-;- + 133 + 1 1.552 65274.5 1.0 5318 5324 10635 HBL1_DMSO_200M_050219_1,10644 HBL1_DMSO_200M_050219_1,10644,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10645 55.457 123.0 602490.0 25 0 102300.0 -1 0 82 340.2154890983691 678.4164252635383 2 340.2160522341728 MULTI CID FTMS 0 0 0 10635 515354.59375 0.9325870418877776 -1 0.0965499877929687 10 3 {I|L}{I|L}HR 4 -1 36.983 0.0 0.0 5.4513 0.0 0.0 141.07642278942518 0.0 141.07642278942518 0.0 17.616844262069687 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 {I|L}{I|L}HR 5.4513 - 22 + 1 1.552 64670.2 1.0 5319 5324 10635 HBL1_DMSO_200M_050219_1,10645 HBL1_DMSO_200M_050219_1,10645, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10646 55.461 168.0 676200.0 25 0 43084.0 + 3267 AYHELAQVY 9 131 547.269151839691 1092.5237507461818 2 547.2690307497978 MULTI CID FTMS 0 0 0 10635 448761.75 0.014224337621242 -5 0.411285400390625 11 Unmodified _AYHELAQVY_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 37.97399986684836 0.0865783450051559 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NE{I|L}AGAVY 10 4 + 73.849 0.0 0.0 6.7595 6.7595 86.133 0.0 0.0 0.0 9.12089143147476 15.026975159433531 9.12089143147476 5.255762612236907 0 1.0 0.0 0.3494850021680094 0.6989700043360187 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NE{I|L}AGAVY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NE{I|L}AQVY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NE{I|L}QAVY;[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}AGAVY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GGE{I|L}AGAVY;{[WN]|[YH]}AE{I|L}AGAVY;[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}AQVY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GGE{I|L}AQVY;{[WN]|[YH]}EA{I|L}AGAVY;{[YC]|[HE]}YA{I|L}AQVY 6.7595;6.2785;6.1616;5.9247;5.9207;5.7999;5.4396;5.4356;5.3631;5.3607 -;-;-;-;-;-;-;-;-;- 1169 1 1.552 95104.4 1.0 5320 5324 10635 HBL1_DMSO_200M_050219_1,10646 HBL1_DMSO_200M_050219_1,10646,AYHELAQVY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10647 55.468 405.0 407140.0 25 0 35947.0 + 36328 SYNAIRTGL 9 151 497.7703226329055 993.526092332611 2 497.7700073122978 MULTI CID FTMS 0 0 0 10635 444389.0 1.0 0 0.0 12 Unmodified _SYNAIRTGL_ ENSG00000176986|ENST00000345254|SEC24C 43.9818466556824 0.0535980856389242 3 YSNA{I|L}RGT{I|L} 9 4 + 98.428 0.0 0.0 9.9069 9.9069 87.942 0.0 0.0 0.0 86.833975425929 13.46787486224656 13.46787486224656 3.0102999566398125 0 1.4291746928241125 2.0 0.5554621874040891 0.4247425010840047 YSNA{I|L}RGT{I|L};SYNA{I|L}RGT{I|L};YSNA{I|L}[VG]GT{I|L};YSGGA{I|L}RGT{I|L};SYNA{I|L}[VG]GT{I|L};SYGGA{I|L}RGT{I|L};YSNA{I|L}RTG{I|L};SYNA{I|L}RTG{I|L};YSNA{I|L}RTAV;YSGGA{I|L}[VG]GT{I|L} 9.9069;9.6039;8.9801;8.9801;8.6771;8.6771;8.4145;8.1115;7.8993;7.6302 -;-;-;-;-;-;-;+;-;- + 989 + 1 1.552 126074.5 1.0 5321 5324 10635 HBL1_DMSO_200M_050219_1,10647 HBL1_DMSO_200M_050219_1,10647,SYNAIRTGL True True SYNAIRTGL 55.467951 497.770007312298 2894876.75 10635.0 ENSG00000176986|ENST00000345254|SEC24C 7.602238655090332 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10648 55.476 481.0 319640.0 25 0 26119.0 -1 RENEYCPCKSH 11 110 761.3153266698953 1520.6161004065905 2 761.3156005740166 MULTI CID FTMS 0 0 0 10635 325556.125 1.0 0 0.0 13 Acetyl (Protein N-term),2 Carbamidomethyl (C) _(Acetyl (Protein N-term))RENEYC(Carbamidomethyl (C))PC(Carbamidomethyl (C))KSH_ ENST00000423113.5_1_10:33190430-33190511:-|nuORF 7.608950283845883 0.8392484121837455 3 HDEAQQNA{M(Oxidation (M))|F}Y 10 -1 87.311 0.0 0.0 5.7418 0.0 0.0 299.11241347480626 0.0 299.11241347480626 0.0 51.80720289712845 0.0 0.0 0 1.1331596456423734 0.0 1.385151878060192 1.274227503252014 HDEAQQNA{M(Oxidation (M))|F}Y 5.7418 - 4124 1 1.552 110504.1 1.0 5322 5324 10635 HBL1_DMSO_200M_050219_1,10648 HBL1_DMSO_200M_050219_1,10648,RENEYCPCKSH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10649 55.485 485.0 415900.0 25 0 35248.0 + 20956 LNKDQWEEWIQ 11 158 744.8593917101825 0 744.8607665896416 PEAK CID FTMS 0 0 0 10635 315060.65625 1.0 0 0.0 14 Unmodified _LNKDQWEEWIQ_ MSN|p.R171W|1|0.09|ENSG00000147065|chrX:65731150-65731150|C/T|missense_variant 38.61474834105838 0.1428580611203947 3 N{I|L}DADQ{[MS]|[{M(Oxidation (M))|F}A]}C(Carbamidomethyl (C))P{I|L} 11 8 75.75 0.0 0.0 5.0917 0.0 0.0 97.05380854358904 143.04656397037346 240.1003725139625 0.0 0.0 0.0 0.0 0 3.412437995416459 0.0 0.9392404878284264 1.4308845489566888 N{I|L}DADQ{[MS]|[{M(Oxidation (M))|F}A]}C(Carbamidomethyl (C))P{I|L} 5.0917 - 30325 + 1 1.552 143812.7 1.0 5323 5324 10635 HBL1_DMSO_200M_050219_1,10649 HBL1_DMSO_200M_050219_1,10649,LNKDQWEEWIQ False True False False variant PXD020620_cell_line HBL1_DMSO_200M_050219_1 10650 55.493 453.0 336560.0 25 0 38638.0 + + 14587 IIDENGVHEL 10 160 569.7901297505579 1137.5657065679156 2 569.7908813357353 MULTI CID FTMS 0 0 0 10635 299112.8125 1.0 0 0.0 15 Unmodified _IIDELYELM_ ENSG00000117143|ENST00000367925|UAP1;nc|ENSG00000117143|Q16222-2|UAP1;nc|ENSG00000117143|Q16222-3|UAP1 42.09456458481378 0.0639583784996157 3 {I|L}{I|L}DENRYV 8 -1 71.171 0.0 0.0 6.2565 0.0 0.0 0.0 132.04586206607658 132.04586206607658 52.30098646616756 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.805462187404089 0.0 {I|L}{I|L}DENRYV 6.2565 - 1084 + 1 1.552 114767.1 1.0 5324 5324 10635 HBL1_DMSO_200M_050219_1,10650 HBL1_DMSO_200M_050219_1,10650,IIDELYELM False False IIDENGVHEL 55.493116 569.790881335735 2268780.5 10635.0 ENSG00000117143|ENST00000367925|UAP1;;nc|ENSG00000117143|Q16222-2|UAP1;;nc|ENSG00000117143|Q16222-3|UAP1 6.196731249491374 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10651 55.503 511.0 157970.0 25 0 12141.0 26741 PAADILNHLAN 11 118 574.8059757947627 1147.5973986563254 2 574.8065063357353 MULTI CID FTMS 0 0 0 10635 200816.484375 0.5850496558554197 2 -0.1944313049316406 16 Unmodified _PAADILNHLAN_ ENSG00000103037|ENST00000219315|SETD6;ENST00000467320.1_1_16:58550403-58550922:+|nuORF;nc|ENSG00000103037|Q8TBK2-2|SETD6 19.361941925380144 0.6323962752489956 3 {NN|[MP]|[D{I|L}]|[EV]}G{[TV]|[{I|L}S]}{I|L}TQV 9 8 26.99 0.0 0.0 2.3519 0.0 0.0 0.0 218.0653301350941 218.0653301350941 5.792352951179829 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.305462187404089 0.0 {NN|[MP]|[D{I|L}]|[EV]}G{[TV]|[{I|L}S]}{I|L}TQV 2.3519 - 566 1 1.552 64861.0 1.0 5325 5324 10635 HBL1_DMSO_200M_050219_1,10651 HBL1_DMSO_200M_050219_1,10651,PAADILNHLAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10652 55.508 275.0 320750.0 25 0 45923.0 + + 42337 IGTVLHEV 8 113 434.251033546949 866.4875141606981 2 434.2513305544853 MULTI CID FTMS 0 0 0 10635 195932.15625 1.0 0 0.0 17 Unmodified _VTAHVELV_ nc|ENSG00000138346|P51530-3|DNA2;ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2;nc|ENSG00000138346|P51530-2|DNA2 24.67388899826682 0.525179942228231 3 {I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}HEV 7 -1 + 19.452 0.0 0.0 2.2449 2.2449 68.248 0.0 0.0 0.0 5.015225105172636 1.4976232033333226 1.4976232033333226 1.4976232033333226 0 0.0 0.0 0.3252574989159953 0.0 {I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}HEV;{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}HD{I|L};{I|L}[{M(Oxidation (M))|F}V]K[{M(Oxidation (M))|F}T]{I|L};{I|L}[{M(Oxidation (M))|F}V]HRPV;{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QP]GPV 2.2449;2.0721;0.19812;0.077385;0.015573 -;-;-;-;- 194 + 1 1.552 71977.7 1.0 5326 5324 10635 HBL1_DMSO_200M_050219_1,10652 HBL1_DMSO_200M_050219_1,10652,VTAHVELV False False IGTVLHEV 55.508389 434.251330554485 1202150.375 10635.0 nc|ENSG00000138346|P51530-3|DNA2;;ENSG00000138346|ENST00000358410|DNA2;;nc|ENSG00000138346|P51530-4|DNA2;;nc|ENSG00000138346|P51530-2|DNA2 2.0447959105173745 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10653 55.522 761.0 68690.0 25 0 8415.9 -1 MDWKMISDNYF 11 89 733.3088352899704 0 733.3091918826103 PEAK CID FTMS 0 0 0 10635 185273.296875 1.0 0 0.0 18 Oxidation (M) _M(Oxidation (M))DWKMISDNYF_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 5.296884461304476 0.47618401536486 3 WEQAED 6 -1 34.641 0.0 0.0 2.3652 0.0 0.0 328.1443785176435 375.14423547916255 703.288613996806 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 WEQAED 2.3652 - 591 + 1 1.552 43697.6 1.0 5327 5324 10635 HBL1_DMSO_200M_050219_1,10653 HBL1_DMSO_200M_050219_1,10653,MDWKMISDNYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10654 55.535 772.0 166870.0 25 0 10895.0 + 40475 VIPEKFQHI 9 159 555.8186926698696 1109.6228324065391 2 555.8197509646416 MULTI CID FTMS 0 0 0 10635 184928.578125 1.0 0 0.0 19 Unmodified _VIPEKFQHI_ ENSG00000231500|ENST00000439602|RPS18;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 54.773552608820026 0.0299037012502309 3 [{I|L}V]PEK{M(Oxidation (M))|F}QH{I|L} 9 0 + 62.052 0.0 0.0 5.5922 5.5922 87.705 0.0 0.0 0.0 26.61597682053261 9.921525057367404 9.921525057367404 11.096529140335464 0 0.4247425010840047 2.0 0.7134679910804405 0.7059771852360797 + + [{I|L}V]PEK{M(Oxidation (M))|F}QH{I|L};[{I|L}V]PEK[HK]PY;[{I|L}V]PEK[HK]{M(Oxidation (M))|F}{I|L};[{I|L}V]PEK{M(Oxidation (M))|F}[AG]H{I|L};[{I|L}V]PEK{M(Oxidation (M))|F}[H{I|L}]Q;[{I|L}V]PEK[HK]YP;[{I|L}V]PEVNRRQ;[{I|L}V]{I|L}[DN]PRRQ;[EP]KWEP{I|L}V{I|L};[EP]K{M(Oxidation (M))|F}QH{I|L}V{I|L} 5.5922;4.5922;4.4605;4.4193;4.1879;4.0801;3.4144;3.1835;3.031;2.7145 +;-;-;-;-;-;-;-;-;- + 1722 + 1 1.552 100491.7 1.0 5328 5324 10635 HBL1_DMSO_200M_050219_1,10654 HBL1_DMSO_200M_050219_1,10654,VIPEKFQHI True True VIPEKFQHI 55.534926 555.819750964642 1248558.875 10635.0 ENST00000496813.5_1_6:33239896-33244045:+|nuORF;;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;;ENSG00000231500|ENST00000439602|RPS18 5.270044485727946 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10655 55.55 800.0 136580.0 25 0 18027.0 -1 0 108 918.4197275791412 1834.824902225082 2 918.9233276247978 MULTI CID FTMS 0 0 0 10635 164716.328125 0.1228711462510298 13 -0.9812660217285156 20 3 [NP]{I|L}[TA]PPPM{[C(Carbamidomethyl (C))G]|[NC]}D{I|L}NP{[QN]|[E{I|L}]|[KN]} 17 -1 + 57.851 0.0 0.0 3.1529 3.1529 71.781 0.0 0.0 0.0 1.1460388904962713 39.89542625657927 1.1460388904962713 2.982975888017677 0 0.0 0.0 0.3494850021680094 0.3807196863200844 [NP]{I|L}[TA]PPPM{[C(Carbamidomethyl (C))G]|[NC]}D{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]NPVW{[QN]|[E{I|L}]|[KN]}DAD{I|L}NP{[QN]|[E{I|L}]|[KN]};[QP]V[TA]PPPM{[C(Carbamidomethyl (C))G]|[NC]}D{I|L}NP{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PN{I|L}DAD{[QN]|[E{I|L}]|[KN]}P[YT]{I|L}{[QS]|[NT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PN{I|L}DAD[W{M(Oxidation (M))|F}][RN]{I|L}{[QS]|[NT]};[NP]{I|L}[TP]APPM{[C(Carbamidomethyl (C))G]|[NC]}D{I|L}NP{[QN]|[E{I|L}]|[KN]};{[HG]|PP}MPVW{[QN]|[E{I|L}]|[KN]}DAD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]NPVW{[QN]|[E{I|L}]|[KN]}WD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]NPVW{[QN]|[E{I|L}]|[KN]}DW{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}NYW[YN]AD{I|L}NP{[QN]|[E{I|L}]|[KN]} 3.1529;2.9904;2.9268;2.8981;2.7925;2.772;2.7303;2.6247;2.6247;2.5701 -;-;-;-;-;-;-;-;-;- 4903 1 1.552 77322.7 0.9200000166893004 5329 5324 10635 HBL1_DMSO_200M_050219_1,10655 HBL1_DMSO_200M_050219_1,10655, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10657 55.554 5.6 9082100.0 25 0 1291600.0 + 21885 LPPEVNRI 8 52 469.276764901342 936.538976869484 2 469.2772399783134 MULTI CID FTMS 0 0 0 10656 9689439.0 0.5417206648264615 4 -0.2097434997558593 1 Unmodified _LPPEVNRI_ ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 14.838274106304384 0.6917062315640577 3 {I|L}PPE 4 4 53.175 0.0 0.0 5.6779 0.0 0.0 0.0 497.2862948053344 497.2862948053344 43.7113751626007 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPE 5.6779 + + 21 + 1 1.546 48168.6 1.0 5330 5325 10656 HBL1_DMSO_200M_050219_1,10657 HBL1_DMSO_200M_050219_1,10657,LPPEVNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10658 55.555 27.0 975610.0 25 0 112680.0 + 36175 SVVPDVRSV 9 43 479.27178049125456 956.5290080493093 2 479.2720519900322 MULTI CID FTMS 0 0 0 10656 971260.0 0.041181556110432 3 -0.1197319030761718 2 Unmodified _SVVPDVRSV_ chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1;ENSG00000073584|ENST00000348513|SMARCE1;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;nc|ENSG00000073584|Q969G3-2|SMARCE1;nc|ENSG00000073584|Q969G3-3|SMARCE1;nc|ENSG00000073584|Q969G3-4|SMARCE1;nc|ENSG00000073584|Q969G3-5|SMARCE1;nc|ENSG00000073584|Q969G3-6|SMARCE1 15.248480904072842 0.4239247793462406 3 [VS]VPD 5 4 49.208 0.0 0.0 5.1445 0.0 0.0 0.0 456.25773175941225 456.25773175941225 42.21848749616356 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + [VS]VPD 5.1445 + + 18 + 1 1.546 29301.5 1.0 5331 5325 10656 HBL1_DMSO_200M_050219_1,10658 HBL1_DMSO_200M_050219_1,10658,SVVPDVRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10659 55.557 15.0 3527200.0 25 0 218490.0 + 5883 DPYKVYRI 8 82 351.86252416148324 1052.5657430846495 3 351.8624145388603 MULTI CID FTMS 0 0 0 10656 3622009.5 0.3982183239978024 -4 0.3929176330566406 3 Unmodified _DPYKVYRI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 34.10243960390752 0.3329570729325616 3 DPYKVY[R{I|L}] 8 0 + 74.998 0.0 0.0 7.1252 7.1252 84.026 0.0 0.0 0.0 33.39948061694351 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.2614393726401688 1.6989700043360187 0.0 0.4247425010840047 + + DPYKVY[R{I|L}];DPYKV{I|L}[YR];DPYK{I|L}V[YR];DPY{I|L}KV[YR] 7.1252;6.8393;6.5533;6.2673 +;-;-;- + 109 + 1 1.546 52562.3 1.0 5332 5325 10656 HBL1_DMSO_200M_050219_1,10659 HBL1_DMSO_200M_050219_1,10659,DPYKVYRI False True DPYKVYRI 55.556557 351.86241453886 249943368.0 10656.0 nc|ENSG00000137265|Q15306-2|IRF4;;ENSG00000137265|ENST00000380956|IRF4;;chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;;ENST00000495137.5_1_6:394829-397293:+|nuORF 6.443133195241292 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10660 55.558 18.0 3320400.0 25 0 255630.0 + 5885 DPYKVYRI 8 62 527.2899528545865 1052.565352775973 2 527.2905151247978 MULTI CID FTMS 0 0 0 10656 3027932.0 0.3064130100947543 -4 0.3929176330566406 4 Unmodified _DPYKVYRI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 41.8396318013385 0.2035142800366642 3 DPYKV 5 3 62.039 0.0 0.0 5.8941 0.0 0.0 0.0 447.23692232150125 447.23692232150125 36.755828144472034 0.0 0.0 0.0 0 1.1861818737241734 1.5228787452803376 0.0 0.0 + DPYKV 5.8941 + + 106 + 1 1.546 49615.4 1.0 5333 5325 10656 HBL1_DMSO_200M_050219_1,10660 HBL1_DMSO_200M_050219_1,10660,DPYKVYRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10661 55.559 19.0 2898000.0 25 0 261520.0 + 4150 DAPHPPLKI 9 84 494.284652859862 986.554752786524 2 494.2844421267509 MULTI CID FTMS 0 0 0 10656 2494559.75 0.0555455596725159 -13 1.1887130737304688 5 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 41.8396318013385 0.0653578398400075 3 {[DA]|[EG]}PHP[{I|L}P]K{I|L} 9 0 + 47.404 0.0 0.0 4.805 4.805 79.41 0.0 0.0 0.0 14.198106842194209 4.973246408079497 4.973246408079497 4.973246408079497 0 1.555462187404089 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}PHP[{I|L}P]K{I|L};{[DA]|[EG]}PHP[{I|L}P]{I|L}K;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[DA]|[EG]}P[{I|L}P]K{I|L};[TA][{M(Oxidation (M))|F}T]P[{I|L}P]K{I|L};[K{I|L}]NW{[DA]|[EG]}K{I|L} 4.805;4.3009;2.3064;0.73433;0.43325 +;-;-;-;- + 155 + 1 1.546 48022.7 1.0 5334 5325 10656 HBL1_DMSO_200M_050219_1,10661 HBL1_DMSO_200M_050219_1,10661,DAPHPPLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10662 55.56 27.0 1717900.0 25 0 114840.0 + 41480 VPLSQVKSI 9 82 485.8005621681812 0 485.8004333376884 PEAK CID FTMS 0 0 0 10656 2028063.0 0.6108144225430505 -1 0.1214179992675781 6 Unmodified _VPLSQVKSI_ ENSG00000177485|ENST00000557385|ZBTB33 53.40400417844725 0.023745606374537 3 P{I|L}{[QS]|[NT]}VKS 7 2 29.557 0.0 0.0 3.0484 0.0 0.0 99.06839620590104 128.07196985416252 227.1403660600636 0.0 0.0 0.0 0.0 0 1.548455006504028 0.0 0.6861818737241735 0.0 + P{I|L}{[QS]|[NT]}VKS 3.0484 + + 362 + 1 1.546 41650.2 1.0 5335 5325 10656 HBL1_DMSO_200M_050219_1,10662 HBL1_DMSO_200M_050219_1,10662,VPLSQVKSI True True VPLSQVKSI 55.560092 485.800433337688 20381264.0 10656.0 ENSG00000177485|ENST00000557385|ZBTB33 5.353721936543782 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10663 55.561 32.0 1649300.0 25 0 150010.0 + 22081 LPPPTPSQI 9 88 475.271559301882 948.528565670564 2 475.2715331912041 MULTI CID FTMS 0 0 0 10656 1712165.75 0.6288692074085889 -4 0.3929176330566406 7 Unmodified _LPPPTPSQI_ ENSG00000083223|ENST00000375963|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 78.14939416004806 0.0179651292570206 3 [{I|L}P]PPT[PS]Q{I|L} 9 0 + 53.394 0.0 0.0 5.6291 5.6291 84.68 0.0 0.0 0.0 11.2708257835682 14.973024840566469 11.2708257835682 7.737190586435361 0 0.8494850021680094 2.0 0.9247425010840048 0.0 + + [{I|L}P]PPT[PS]Q{I|L};[{I|L}P]P[DG]P{I|L}Q{I|L};[{I|L}P]PPT[PS][AG]{I|L};[{I|L}P]PP[DG]{I|L}Q{I|L};{[HG]|PP}TPSP{I|L}Q{I|L};{[HG]|PP}TP{I|L}[PS]Q{I|L};[{I|L}P]P[DG]P{I|L}[AG]{I|L};[{I|L}P]PP[DG]{I|L}[AG]{I|L};{[HG]|PP}TPSP{I|L}[AG]{I|L};[{I|L}P]P[DG]Q[{I|L}P]{I|L} 5.6291;4.8134;4.6584;4.4955;4.4409;4.3341;3.8427;3.5248;3.4701;3.4472 +;-;-;-;-;-;-;-;-;- + 459 1 1.546 49855.0 1.0 5336 5325 10656 HBL1_DMSO_200M_050219_1,10663 HBL1_DMSO_200M_050219_1,10663,LPPPTPSQI True True LPPPTPSQI 55.561272 475.271533191204 106538384.0 10656.0 nc|ENSG00000083223|Q5VYS8-5|TUT7;;nc|ENSG00000083223|Q5VYS8-4|TUT7;;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;;nc|ENSG00000083223|Q5VYS8-3|TUT7;;nc|ENSG00000083223|Q5VYS8-2|TUT7;;ENSG00000083223|ENST00000375963|TUT7;;nc|ENSG00000083223|Q5VYS8-6|TUT7 4.661092122395833 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10664 55.563 47.0 1447900.0 25 0 260590.0 + 31867 RTLAEIAKV 9 74 500.81100701204326 999.6074610908864 2 500.8112060427666 MULTI CID FTMS 0 0 0 10656 1441787.875 0.2873433105823065 -4 0.3929176330566406 8 Unmodified _RTLAEIAKV_ ENSG00000147140|ENST00000276079|NONO;ENST00000471419.6_1_X:70511819-70517312:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO;NONO|p.K279Sfs*33|1|0.05|ENSG00000147140|chrX:71296939-71296939|A/-|frameshift_variant 20.41453444215458 0.284085796332423 3 AVK 3 7 31.387 0.0 0.0 3.14 0.0 0.0 683.3960180750647 0.0 683.3960180750647 0.0 18.991414201961355 0.0 0.0 0 1.0 0.0 0.0 0.5189301784845296 AVK 3.14 - 73 + 1 1.546 57166.7 1.0 5337 5325 10656 HBL1_DMSO_200M_050219_1,10664 HBL1_DMSO_200M_050219_1,10664,RTLAEIAKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10665 55.564 25.0 1369500.0 25 0 129180.0 + 31348 RMVAEIQNV 9 74 530.284169991632 1058.553787050064 2 530.2850219607353 MULTI CID FTMS 0 0 0 10656 1384988.625 1.0 0 0.0 9 Unmodified _RMVAEIQNV_ chr2:230235075-230237083|42|11.86|0.22|5.72|+|1|SP140,SP140|2;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000473711.1_1_2:231090559-231102095:+|nuORF;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 21.53697664764585 0.2571576504437394 3 P{[CT]|[{M(Oxidation (M))|F}G]}AE{I|L}QNV 9 2 34.359 0.0 0.0 3.2458 0.0 0.0 85.08987624336093 0.0 85.08987624336093 0.0 19.665762445130504 0.0 0.0 0 0.5484550065040281 0.0 0.0 0.0 P{[CT]|[{M(Oxidation (M))|F}G]}AE{I|L}QNV 3.2458 - 185 1 1.546 35983.7 1.0 5338 5325 10656 HBL1_DMSO_200M_050219_1,10665 HBL1_DMSO_200M_050219_1,10665,RMVAEIQNV False True RMVAEIQNV 55.563715 530.285021960735 21521098.0 10656.0 chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;;nc|ENSG00000079263|Q13342-5|SP140;;chr2:230235075-230237083|42|11.86|0.22|5.72|+|1|SP140,SP140|2;;nc|ENSG00000079263|Q13342-2|SP140;;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-6|SP140;;nc|ENSG00000079263|Q13342-4|SP140;;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;;ENST00000473711.1_1_2:231090559-231102095:+|nuORF;;ENSG00000079263|ENST00000392045|SP140;;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-3|SP140 5.469136397043864 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10666 55.565 41.0 1347400.0 25 0 403420.0 -1 LFWFLFPF 8 57 579.8060589913505 1157.5975650495009 2 579.8062621951103 MULTI CID FTMS 0 0 0 10656 1083931.375 0.2906496914534061 1 -0.0730133056640625 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LFWFLFPF_ ENST00000420843.6_1_11:74976857-74977136:-|nuORF 6.354104778181461 0.7857632046190106 3 {M(Oxidation (M))|F} 1 -1 12.764 0.0 0.0 1.1026 0.0 0.0 992.5180800414915 0.0 992.5180800414915 0.0 0.2899597348884342 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1026 + + 14 + 1 1.546 46191.4 1.0 5339 5325 10656 HBL1_DMSO_200M_050219_1,10666 HBL1_DMSO_200M_050219_1,10666,LFWFLFPF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10667 55.566 62.0 1401900.0 25 0 219460.0 + 32401 RYVPRASYF 9 71 386.8733484128607 1157.5982158387822 3 386.8731872439384 MULTI CID FTMS 0 0 0 10656 961571.6875 0.4302107036407026 1 -0.0730133056640625 11 Unmodified _RYVPRASYF_ ENSG00000112576|ENST00000372991|CCND3;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;nc|ENSG00000112576|P30281-3|CCND3 30.63653989081413 0.1413794767160703 3 VQV[PS]Y{M(Oxidation (M))|F} 7 4 30.225 0.0 0.0 2.611 0.0 0.0 319.16411025215 0.0 319.16411025215 0.0 17.126072677950646 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.3252574989159953 VQV[PS]Y{M(Oxidation (M))|F} 2.611 - 295 1 1.546 76347.4 1.0 5340 5325 10656 HBL1_DMSO_200M_050219_1,10667 HBL1_DMSO_200M_050219_1,10667,RYVPRASYF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10668 55.568 66.0 834200.0 25 0 79635.0 + 13685 HQIEAVDGEEL 11 61 620.2963161633384 1238.5780793934766 2 620.2963134646416 MULTI CID FTMS 0 0 0 10656 902930.4375 0.0437995669329801 -4 0.3929176330566406 12 Unmodified _HQIEAVDGEEL_ ENSG00000105404|ENST00000222008|RABAC1;ENST00000595226.1_1_19:42461000-42461518:-|nuORF 42.83518252547288 0.1687213420692654 3 [HQ]{I|L}EAVDGEE{I|L} 11 0 + 78.831 0.0 0.0 6.3647 6.3647 84.376 0.0 0.0 0.0 5.862435673934272 47.88419532281277 5.862435673934272 4.771212547196626 0 0.3054621874040891 0.0 0.805462187404089 0.0 + + [HQ]{I|L}EAVDGEE{I|L};[HQ]{I|L}EG{I|L}DGEE{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]AVDGEE{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]G{I|L}DGEE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]AVDGEE{I|L};[DG]V[HV]AVDGEE{I|L};[DV]G[HV]AVDGEE{I|L};{[CP]|[EA]}A[HV]AVDGEE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]G{I|L}DGEE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]AVDWE{I|L} 6.3647;5.9795;5.5157;5.1305;4.6077;4.381;4.2559;4.2225;4.2225;4.0768 +;-;-;-;-;-;-;-;-;- + 553 1 1.546 51365.3 1.0 5341 5325 10656 HBL1_DMSO_200M_050219_1,10668 HBL1_DMSO_200M_050219_1,10668,HQIEAVDGEEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10669 55.569 45.0 1266500.0 25 0 84995.0 + 21526 LPIQPAQHI 9 92 508.7984821326804 1015.5824113321607 2 508.7988464236259 MULTI CID FTMS 0 0 0 10656 899927.1875 0.5656728614166144 -4 0.3929176330566406 13 Unmodified _LPIQPAQHI_ ENSG00000116044|ENST00000397062|NFE2L2;ENST00000462023.1_1_2:178098693-178129304:-|nuORF;ENST00000477534.1_1_2:178098693-178128139:-|nuORF;nc|ENSG00000116044|Q16236-2|NFE2L2;nc|ENSG00000116044|Q16236-3|NFE2L2 57.47134341890925 0.0274820932774257 3 {I|L}PQ{I|L}[PA]QH{I|L} 9 2 + 63.126 0.0 0.0 6.2157 6.2157 82.299 0.0 0.0 0.0 40.16257482205354 5.324156857539961 5.324156857539961 3.5121967796476383 0 1.742992819099939 2.0 0.0 0.3054621874040891 {I|L}PQ{I|L}[PA]QH{I|L};{I|L}PQ{I|L}[PA]AGH{I|L};{I|L}PQ{I|L}{I|L}N[YR];{I|L}PQ{I|L}[KG]{M(Oxidation (M))|F}T{I|L};{I|L}PQ{I|L}{I|L}GG[YR];{I|L}PQ{I|L}{I|L}[HQ][PA] 6.2157;5.8699;5.5176;4.6231;4.6056;4.05 -;-;-;-;-;- 368 + 1 1.546 51486.1 1.0 5342 5325 10656 HBL1_DMSO_200M_050219_1,10669 HBL1_DMSO_200M_050219_1,10669,LPIQPAQHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10670 55.571 67.0 885040.0 25 0 82803.0 15745 ISAAELCHVMT 11 92 587.7853319697846 1173.556111006369 2 587.7853881716728 MULTI CID FTMS 0 0 0 10656 818599.6875 0.7293583208001739 -1 0.1214179992675781 14 Unmodified _ISAAELCHVMT_ ENST00000585658.1_1_17:68237680-68237866:+|nuORF 22.736283301280096 0.5583477779825423 3 {[TV]|[{I|L}S]}AEAAT 7 6 44.294 0.0 0.0 3.7744 0.0 0.0 0.0 527.2177680710753 527.2177680710753 18.017061966422148 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 1.7544321917401078 0.0 {[TV]|[{I|L}S]}AEAAT 3.7744 - 745 1 1.546 54553.9 1.0 5343 5325 10656 HBL1_DMSO_200M_050219_1,10670 HBL1_DMSO_200M_050219_1,10670,ISAAELCHVMT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10671 55.572 42.0 751410.0 25 0 81654.0 + 32530 SALTSSAVTSV 11 62 511.77245237105456 0 511.7723266482353 PEAK CID FTMS 0 0 0 10656 747932.75 0.7973047503728041 -1 0.1214179992675781 15 Unmodified _SALTSSAVTSV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 17.11289562659939 0.3845757490720307 3 {I|L} 1 10 6.9897 0.0 0.0 0.68424 0.0 0.0 233.11178599035287 672.3104952447874 905.4222812351402 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.68424 + + 42 + 1 1.546 29400.0 1.0 5344 5325 10656 HBL1_DMSO_200M_050219_1,10671 HBL1_DMSO_200M_050219_1,10671,SALTSSAVTSV False True SALTSSAVTSV 55.572036 511.772326648235 101698704.0 10656.0 nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27 6.008288065592448 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10672 55.576 179.0 292960.0 25 0 19087.0 -1 ISSCHMRQATC 11 88 683.786089757083 1365.557626580966 2 683.7874023318291 MULTI CID FTMS 0 0 0 10656 360703.1875 0.7448091633740956 -1 0.1214179992675781 16 2 Carbamidomethyl (C),Oxidation (M) _ISSC(Carbamidomethyl (C))HM(Oxidation (M))RQATC(Carbamidomethyl (C))_ ENSG00000070404|ENST00000166139|FSTL3;nc|ENSG00000070404|O95633-2|FSTL3 8.745405648335112 0.8338865417133445 3 {[TV]|[{I|L}S]}AEYA 6 -1 39.733 0.0 0.0 2.9096 0.0 0.0 0.0 728.2377772980159 728.2377772980159 11.019622842087411 0.0 0.0 0.0 0 0.5 2.0 1.2302046884880935 0.0 {[TV]|[{I|L}S]}AEYA 2.9096 - 295 1 1.546 43099.0 1.0 5345 5325 10656 HBL1_DMSO_200M_050219_1,10672 HBL1_DMSO_200M_050219_1,10672,ISSCHMRQATC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10673 55.589 800.0 338220.0 25 0 22970.0 + 14565 IHREVLDLV 9 249 365.2174251166808 0 365.2169372439384 PEAK CID FTMS 0 0 0 10656 165671.375 0.6940720906309149 -4 0.3929176330566406 17 Unmodified _IHREVLDLV_ ENST00000502322.5_1_5:110836328-110836385:-|nuORF 5.783430956126388 0.3444685223463734 3 VET 3 8 7.7469 0.0 0.0 1.0635 0.0 0.0 94.06376431305314 302.17673669986567 396.2405010129188 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VET 1.0635 - 36 + 1 1.546 222321.2 0.8100000023841858 5346 5325 10656 HBL1_DMSO_200M_050219_1,10673 HBL1_DMSO_200M_050219_1,10673,IHREVLDLV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10674 55.603 800.0 290990.0 25 0 20824.0 + 36477 TAAVLHTI 8 233 413.24599442605336 824.4774359189067 2 413.7473327517509 MULTI CID FTMS 0 0 0 10656 165880.71875 1.0 0 0.0 18 Unmodified _TAAVLHTI_ ENSG00000112659|ENST00000252050|CUL9;ENST00000451399.5_1_6:43152048-43155921:+|nuORF;ENST00000515773.5_1_6:43152048-43164205:+|nuORF;nc|ENSG00000112659|Q8IWT3-3|CUL9 36.04419817259434 0.3004715606373109 3 [TA]AV{I|L}HT{I|L} 8 0 + 44.343 0.0 0.0 5.3784 5.3784 83.493 0.0 0.0 0.0 9.306872924819883 5.478403439064223 5.478403439064223 7.160677999045717 0 0.7429928190999391 2.0 1.305462187404089 0.0 + + [TA]AV{I|L}HT{I|L};WR{I|L}HT{I|L};[H{I|L}]T{I|L}G{I|L}[TA];[H{I|L}]VAT{I|L}[TA];[H{I|L}]TVA{I|L}[TA];[H{I|L}]T{I|L}VA[TA];[H{I|L}]VTA{I|L}[TA];[HT]{I|L}{I|L}G{I|L}[TA];[H{I|L}]TV{I|L}A[TA];[H{I|L}]VT{I|L}A[TA] 5.3784;4.5098;3.8641;3.499;2.9661;2.9352;2.601;2.1227;2.0373;1.6721 +;-;-;-;-;-;-;-;-;- + 516 + 1 1.546 178191.5 0.8600000143051147 5347 5325 10656 HBL1_DMSO_200M_050219_1,10674 HBL1_DMSO_200M_050219_1,10674,TAAVLHTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10675 55.61 377.0 441460.0 25 0 80654.0 + 44893 YPPPAPGI 8 163 406.2214075174781 810.4282621017561 2 406.2213317751884 MULTI CID FTMS 0 0 0 10656 144117.296875 0.2964128655458636 8 -0.5422477722167969 19 Unmodified _YPPPAPGI_ ENSG00000205352|ENST00000429243|PRR13;nc|ENSG00000205352|Q9NZ81-2|PRR13 32.45364647766026 0.3613649037604678 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVP 5 5 48.2 0.0 0.0 5.9475 0.0 0.0 0.0 222.12369148063843 222.12369148063843 24.306554955700644 0.0 0.0 0.0 0 0.7257724967479859 2.0 0.3494850021680094 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVP 5.9475 - 342 1 1.546 131423.5 1.0 5348 5325 10656 HBL1_DMSO_200M_050219_1,10675 HBL1_DMSO_200M_050219_1,10675,YPPPAPGI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10676 55.623 762.0 210920.0 25 0 23848.0 -1 SFLCMAPEV 9 192 535.235901283436 1068.4572496336718 2 535.2347289919853 MULTI CID FTMS 0 0 0 10656 141613.59375 0.4702012420040155 -2 0.2179679870605468 20 Carbamidomethyl (C),Oxidation (M) _SFLC(Carbamidomethyl (C))M(Oxidation (M))APEV_ ENST00000445336.2_1_X:74804463-74804925:+|nuORF 11.640296217721598 0.521594087909532 3 {I|L} 1 -1 13.495 0.0 0.0 1.263 0.0 0.0 937.3621701432406 0.0 937.3621701432406 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.263 + + 280 + 1 1.546 125981.3 1.0 5349 5325 10656 HBL1_DMSO_200M_050219_1,10676 HBL1_DMSO_200M_050219_1,10676,SFLCMAPEV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10678 55.627 3.4 13795000.0 25 0 3202300.0 + 9937 FPGKHFQEI 9 82 368.194404519104 1101.5613841575118 3 368.1944152712822 MULTI CID FTMS 0 0 0 10677 12666406.0 0.7173103073496296 15 -1.1656990051269531 1 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 18.1463463914782 0.3454829746528889 3 QE{M(Oxidation (M))|F}{I|L} 4 7 22.92 0.0 0.0 2.0806 0.0 0.0 566.2952748029312 0.0 566.2952748029312 0.0 8.940162615404077 0.0 0.0 0 0.242992819099939 0.0 0.0 0.8807196863200843 QE{M(Oxidation (M))|F}{I|L} 2.0806 - 232 1 1.546 43204.1 1.0 5350 5326 10677 HBL1_DMSO_200M_050219_1,10678 HBL1_DMSO_200M_050219_1,10678,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10679 55.628 6.5 10878000.0 25 0 1544200.0 + 4174 DAPIGPHL 8 66 410.22171120493886 818.4288694766777 2 410.2216369509697 MULTI CID FTMS 0 0 0 10677 7646610.0 1.0 0 0.0 2 Unmodified _DAPIGPHL_ ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A 45.7499826716795 0.1592378023510922 3 {[DA]|[EG]}P{I|L}GPH{I|L} 8 0 + 64.417 0.0 0.0 7.8708 7.8708 97.394 0.0 0.0 0.0 46.13320342778374 9.886609973919278 9.886609973919278 64.416612754628 0 0.6694451763165201 2.0 0.0 0.0 + + {[DA]|[EG]}P{I|L}GPH{I|L} 7.8708 + + 69 + 1 1.546 60546.0 1.0 5351 5326 10677 HBL1_DMSO_200M_050219_1,10679 HBL1_DMSO_200M_050219_1,10679,DAPIGPHL False True DAPIGPHL 55.62839 410.22163695097 162477792.0 10677.0 ENSG00000107581|ENST00000369144|EIF3A;;nc|ENSG00000107581|Q14152-2|EIF3A 7.199346701304118 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10680 55.63 5.3 3937200.0 25 0 315080.0 19389 LERRPCSLE 9 56 551.7873955743806 1101.5602382155612 2 551.7877685427666 MULTI CID FTMS 0 0 0 10677 7104647.0 0.5391757797339671 15 -1.1656990051269531 3 Unmodified _LERRPCSLE_ ENST00000370355.2_1_10:102122728-102122854:+|nuORF 10.150570793230772 0.5619192000662246 3 PE 2 7 19.464 0.0 0.0 1.7669 0.0 0.0 857.4433460919937 0.0 857.4433460919937 0.0 8.750612633917001 0.0 0.0 0 0.0 0.0 0.0 0.0 PE 1.7669 - 9 1 1.546 21158.0 1.0 5352 5326 10677 HBL1_DMSO_200M_050219_1,10680 HBL1_DMSO_200M_050219_1,10680,LERRPCSLE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10681 55.631 8.3 8809500.0 25 0 925080.0 + 4144 DAPHPPLKI 9 91 329.8590105895294 986.5552023687884 3 329.8588744997978 MULTI CID FTMS 0 0 0 10677 5203721.0 0.1203384615128456 -12 1.116863250732422 4 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 19.256988751693697 0.3154191944385105 3 {[DA]|[EG]}PH{I|L}K 6 3 44.235 0.0 0.0 4.4838 0.0 0.0 0.0 322.1780184381469 322.1780184381469 32.81522351455129 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {[DA]|[EG]}PH{I|L}K 4.4838 - 65 + 1 1.546 61378.6 1.0 5353 5326 10677 HBL1_DMSO_200M_050219_1,10681 HBL1_DMSO_200M_050219_1,10681,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10682 55.632 8.9 3621400.0 25 0 701560.0 + 15399 IPPDQQRLI 9 44 540.3145428572215 1078.6145327812428 2 540.3144409060478 MULTI CID FTMS 0 0 0 10677 4766786.0 0.0915239453671789 15 -1.1656990051269531 5 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 10.073929032068715 0.563993802247229 3 {I|L}P 2 7 45.217 0.0 0.0 4.1921 0.0 0.0 0.0 865.4542691081709 865.4542691081709 40.612431371158735 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.1921 + + 10 + 1 1.546 32263.4 1.0 5354 5326 10677 HBL1_DMSO_200M_050219_1,10682 HBL1_DMSO_200M_050219_1,10682,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10683 55.633 14.0 1989900.0 25 0 270040.0 + 44901 YPPPEVRNI 9 46 542.7931421868918 1083.5717314405836 2 542.7933227419853 MULTI CID FTMS 0 0 0 10677 2846646.25 0.0599122560476805 15 -1.1656990051269531 6 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 12.872603262515298 0.4882369880199512 3 YPP 3 6 50.445 0.0 0.0 4.6555 0.0 0.0 0.0 723.380418743665 723.380418743665 43.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YPP 4.6555 + + 8 + 1 1.546 28518.6 1.0 5355 5326 10677 HBL1_DMSO_200M_050219_1,10683 HBL1_DMSO_200M_050219_1,10683,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10684 55.634 13.0 2037800.0 25 0 169040.0 43516 WWWWIWWQWW 10 43 874.9044782998504 1747.7944036665008 2 874.9069091677666 MULTI CID FTMS 0 0 0 10677 2818123.0 0.6759865017288416 -3 0.2909812927246094 7 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 3 DAN{I|L}{[HG]|PP}EM 8 9 38.136 0.0 0.0 2.182 0.0 0.0 862.4324688699878 0.0 862.4324688699878 0.0 20.477372199242296 0.0 0.0 0 0.0 0.0 0.0 0.0 DAN{I|L}{[HG]|PP}EM 2.182 - 86 1 1.546 25437.3 1.0 5356 5326 10677 HBL1_DMSO_200M_050219_1,10684 HBL1_DMSO_200M_050219_1,10684,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 10685 55.635 17.0 2162700.0 25 0 304560.0 + 38369 TQRPPPHL 8 74 315.84712001612127 944.519530648564 3 316.1806518435478 MULTI CID FTMS 0 0 0 10677 2527949.75 0.2066658543207307 6 -0.3906822204589844 8 Unmodified _TQRPPPHL_ REV__ENSG00000100393|ENST00000263253|EP300;REV__EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 2.889219685676258 0.8067950007271085 3 {I|L}GP[H{I|L}] 5 -1 19.208 0.0 0.0 2.0336 0.0 0.0 409.2096074081325 0.0 409.2096074081325 0.0 16.989700043360184 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}GP[H{I|L}] 2.0336 - 14 + 1 1.546 35051.2 1.0 5357 5326 10677 HBL1_DMSO_200M_050219_1,10685 HBL1_DMSO_200M_050219_1,10685,TQRPPPHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10686 55.637 22.0 1717400.0 25 0 184970.0 + 5693 DPIGKATLV 9 75 457.27096244770473 912.5273719622096 2 457.2713500857353 MULTI CID FTMS 0 0 0 10677 1917612.125 1.0 0 0.0 9 Unmodified _DPIGKATLV_ ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 22.736283301280096 0.2418982879461534 3 DP{I|L} 3 6 54.253 0.0 0.0 5.9453 0.0 0.0 0.0 584.342355289082 584.342355289082 40.27310937020445 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + DP{I|L} 5.9453 + + 35 + 1 1.546 32659.8 1.0 5358 5326 10677 HBL1_DMSO_200M_050219_1,10686 HBL1_DMSO_200M_050219_1,10686,DPIGKATLV False True DPIGKATLV 55.636654 457.271350085735 10891425.0 10677.0 ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 1.5914384921391804 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10687 55.638 14.0 1674400.0 25 0 164190.0 30647 RFPDGTNGL 9 64 488.7463658334003 975.4781787336008 2 488.7450134158134 MULTI CID FTMS 0 0 0 10677 1618047.875 0.69431048062414 -3 0.2909812927246094 10 Unmodified _RFPDGTNGL_ ENSG00000164442|ENST00000367651|CITED2;nc|ENSG00000164442|Q99967-2|CITED2 18.1463463914782 0.3454829746528889 3 {I|L} 1 8 12.474 0.0 0.0 1.2788 0.0 0.0 844.3829466552788 0.0 844.3829466552788 0.0 -4.960762528683702 -4.960762528683702 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2788 + + 13 + 1 1.546 24445.6 1.0 5359 5326 10677 HBL1_DMSO_200M_050219_1,10687 HBL1_DMSO_200M_050219_1,10687,RFPDGTNGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10688 55.639 17.0 1278100.0 25 0 95978.0 15200 IPESGTEDNV 10 58 530.7433095394466 1059.4720661456931 2 530.7435180544853 MULTI CID FTMS 0 0 0 10677 1445011.0 0.9183465819972392 -3 0.2909812927246094 11 Unmodified _IPESGTEDNV_ ENSG00000163520|ENST00000404922|FBLN2;nc|ENSG00000163520|P98095|FBLN2 10.073929032068715 0.6785112666868882 3 [{I|L}P][C(Carbamidomethyl (C))C]E 5 7 27.9 0.0 0.0 2.6334 0.0 0.0 0.0 454.2233065240844 454.2233065240844 14.800821617046935 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}P][C(Carbamidomethyl (C))C]E 2.6334 - 18 + 1 1.546 21760.3 1.0 5360 5326 10677 HBL1_DMSO_200M_050219_1,10688 HBL1_DMSO_200M_050219_1,10688,IPESGTEDNV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10689 55.641 70.0 482160.0 25 0 61055.0 + 21959 LPPMDHSTI 9 66 505.7524556931607 1009.4903584531214 2 505.7530700564384 MULTI CID FTMS 0 0 0 10677 675123.0 0.2706785818384908 15 -1.1656990051269531 12 Unmodified _LPPMDHSTI_ ENSG00000064666|ENST00000263097|CNN2;nc|ENSG00000064666|Q99439-2|CNN2 26.88365393820708 0.1891292719743517 3 {I|L}P 2 7 45.217 0.0 0.0 4.4791 0.0 0.0 0.0 796.3338686397661 796.3338686397661 27.998037644757048 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.4791 + + 37 + 1 1.546 34308.6 1.0 5361 5326 10677 HBL1_DMSO_200M_050219_1,10689 HBL1_DMSO_200M_050219_1,10689,LPPMDHSTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10690 55.642 48.0 470690.0 25 0 42934.0 + 39822 VEVSLEKV 8 57 451.7628766350575 901.5112003369152 2 452.2617065310478 MULTI CID FTMS 0 0 0 10677 608949.4375 0.3660619955521879 -3 0.2909812927246094 13 Unmodified _VEVSLEKV_ REV__ENSG00000109927|ENST00000392793|TECTA 8.593279151180031 0.7721714526254883 3 V 1 -1 11.99 0.0 0.0 1.33 0.0 0.0 784.4316390349604 0.0 784.4316390349604 0.0 7.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.33 + + 26 + 1 1.546 24253.2 1.0 5362 5326 10677 HBL1_DMSO_200M_050219_1,10690 HBL1_DMSO_200M_050219_1,10690,VEVSLEKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10691 55.644 86.0 663130.0 25 0 49736.0 + 35103 SQVSDEEDS 9 100 498.1937761987648 994.3729994643296 2 498.1940185427666 MULTI CID FTMS 0 0 0 10677 561685.625 0.8361024415445032 -3 0.2909812927246094 14 Unmodified _SQVSDEEDS_ REV__ENSG00000054938|ENST00000376332|CHRDL2;REV__nc|ENSG00000054938|Q6WN34-2|CHRDL2 10.823927491677226 0.5436922275383211 3 {[QS]|[NT]}V 3 -1 18.442 0.0 0.0 1.8546 0.0 0.0 0.0 677.1910591169265 677.1910591169265 5.67791512735813 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.6747425010840047 {[QS]|[NT]}V 1.8546 + + 100 1 1.546 51616.2 1.0 5363 5326 10677 HBL1_DMSO_200M_050219_1,10691 HBL1_DMSO_200M_050219_1,10691,SQVSDEEDS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10692 55.65 342.0 480830.0 25 0 43774.0 + 18486 KYMQKSLEL 9 168 570.3100542162031 1138.605555499206 2 570.3111450076103 MULTI CID FTMS 0 0 0 10677 556919.3125 0.7226016096920495 -3 0.2909812927246094 15 Unmodified _KYMQKSLEL_ ENSG00000163728|ENST00000296015|TTC14;nc|ENSG00000163728|Q96N46-2|TTC14 71.70789743142352 0.0204387454931768 3 YMQS{I|L}KE{I|L} 8 3 53.902 0.0 0.0 4.7341 0.0 0.0 128.0954304425797 0.0 128.0954304425797 0.0 21.76532708202309 0.0 0.0 0 1.8116042352767727 0.0 0.2887254899964357 0.555462187404089 YMQS{I|L}KE{I|L} 4.7341 - 4718 1 1.546 123351.9 1.0 5364 5326 10677 HBL1_DMSO_200M_050219_1,10692 HBL1_DMSO_200M_050219_1,10692,KYMQKSLEL True True KYMQKSLEL 55.650042 570.31114500761 8004754.75 10677.0 nc|ENSG00000163728|Q96N46-2|TTC14;;ENSG00000163728|ENST00000296015|TTC14 4.390486717224121 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10693 55.655 253.0 496170.0 25 0 56331.0 + 18487 KYMQKSLEL 9 146 380.542580241405 1138.605911324415 3 380.5426818728447 MULTI CID FTMS 0 0 0 10677 322234.6875 0.6480513166398979 -3 0.2909812927246094 16 Unmodified _KYMQKSLEL_ ENSG00000163728|ENST00000296015|TTC14;nc|ENSG00000163728|Q96N46-2|TTC14 21.74664581756881 0.2544899275067181 3 [{I|L}T][QP]Q 5 8 22.179 0.0 0.0 1.9479 0.0 0.0 0.0 568.2946679984963 568.2946679984963 1.7685427522183517 0.0 0.0 0.0 0 0.0 2.0 0.2742275032520141 0.5 [{I|L}T][QP]Q 1.9479 - 330 1 1.546 106794.6 1.0 5365 5326 10677 HBL1_DMSO_200M_050219_1,10693 HBL1_DMSO_200M_050219_1,10693,KYMQKSLEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10694 55.664 531.0 174340.0 25 0 8570.8 + 41126 VNYKDSYRRRI 11 111 735.4015232088444 0 735.7281982302666 PEAK CID FTMS 0 0 0 10677 96084.7890625 0.3589352869794734 -7 0.6057167053222656 17 Unmodified _VNYKDSYRRRI_ REV__ENSG00000114861|ENST00000649528|FOXP1;REV__nc|ENSG00000285708|Q9H334-3|FOXP1;REV__nc|ENSG00000285708|Q9H334-4|FOXP1;REV__nc|ENSG00000285708|Q9H334-6|FOXP1;REV__nc|ENSG00000285708|Q9H334-7|FOXP1;REV__nc|ENSG00000285708|Q9H334-8|FOXP1 5.296884461304476 0.47618401536486 3 VNTSQSP 7 -1 39.052 0.0 0.0 2.6588 0.0 0.0 129.1246710789913 623.3055331923115 752.4302042713027 0.0 0.0 0.0 0.0 0 0.0 0.0 1.5387254899964358 0.0 VNTSQSP 2.6588 - 345 + 1 1.546 76811.9 1.0 5366 5326 10677 HBL1_DMSO_200M_050219_1,10694 HBL1_DMSO_200M_050219_1,10694,VNYKDSYRRRI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10696 55.668 24.0 1989700.0 25 0 424930.0 + 17264 KLPEKWESV 9 76 558.3083439989884 1114.6021350647768 2 558.3087036013603 MULTI CID FTMS 0 0 0 10695 2288959.75 0.7818933509800441 1 -0.0056610107421875 1 Unmodified _KLPEKWESV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 19.256988751693697 0.3154191944385105 3 [EP]KWESV[K{I|L}] 9 4 + 38.835 0.0 0.0 3.4842 3.4842 83.805 0.0 0.0 0.0 10.999161495794432 26.845012469977767 10.999161495794432 38.83471251333796 0 0.0 0.0 0.7742275032520141 0.0 [EP]KWESV[K{I|L}] 3.4842 - 45 1 1.546 41913.6 1.0 5367 5327 10695 HBL1_DMSO_200M_050219_1,10696 HBL1_DMSO_200M_050219_1,10696,KLPEKWESV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10697 55.67 58.0 792490.0 25 0 67519.0 + 13957 HYQAIVTAY 9 81 533.2719090992596 1064.529265265319 2 533.2716552615166 MULTI CID FTMS 0 0 0 10695 807516.25 0.5330895914123801 1 -0.0056610107421875 2 Unmodified _HYQAIVTAY_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 21.74664581756881 0.2544899275067181 3 {[WN]|[YH]}QA{I|L}VTAY 9 0 {[WN]|[YH]}QA{I|L}VT + + 19.464 25.366 3.1223 1.8284 1.8284 48.719 0.0 0.0 0.0 0.0 -5.902435203467178 -5.902435203467178 0.0 0 0.0 0.0 0.0 0.0 + + {[WN]|[YH]}QA{I|L}VTAY 1.8284 + + 127 + 1 1.546 43144.3 1.0 5368 5327 10695 HBL1_DMSO_200M_050219_1,10697 HBL1_DMSO_200M_050219_1,10697,HYQAIVTAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10699 55.675 151.0 799940.0 25 0 50226.0 + + 26837 DSPASLEV 8 101 817.3944292984513 816.3871528318513 1 817.3953124880791 MULTI CID FTMS 0 0 0 10698 663500.1875 0.6468197176379267 2 -0.1692771911621093 1 Unmodified _PASDSIEV_ ENST00000534356.1_1_11:104817674-104819389:-|nuORF;ENSG00000196954|ENST00000444739|CASP4;ENST00000529565.1_1_11:104819221-104819389:-|nuORF;nc|ENSG00000196954|P49662-2|CASP4 101.72198241140316 0.0888720693655427 3 [PA]SDS{I|L}EV 8 -1 + 81.78 0.0 0.0 10.017 10.017 96.258 0.0 0.0 0.0 17.447274948966935 43.57865760703925 17.447274948966935 10.937492820425804 0 0.8609243748081782 1.0457574905606752 2.110924374808178 0.0 [PA]SDS{I|L}EV;[PA]SSD{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}ND{I|L}EV;[PA]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}EV;[PA]SE[VS]EV;{NN|[MP]|[D{I|L}]|[EV]}GGD{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}DD{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}T[PA]VAM;[PA]GQQA{M(Oxidation (M))|F}V;[PA]S{I|L}{[CA]|SS}QQ 10.017;8.6776;6.8504;6.1434;6.0083;5.7075;4.8156;3.5938;3.4296;3.3934 +;-;-;-;-;-;-;-;-;- + 675 1 1.546 90489.7 1.0 5369 5328 10698 HBL1_DMSO_200M_050219_1,10699 HBL1_DMSO_200M_050219_1,10699,PASDSIEV False False DSPASLEV 55.674719 817.395312488079 5523988.0 10698.0 ENST00000534356.1_1_11:104817674-104819389:-|nuORF;;ENSG00000196954|ENST00000444739|CASP4;;ENST00000529565.1_1_11:104819221-104819389:-|nuORF;;nc|ENSG00000196954|P49662-2|CASP4 6.006507555643718 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10700 55.683 490.0 376110.0 25 0 33088.0 + + -1 AYYAPGYTQTSY 12 180 692.805771168581 1383.596989403962 2 692.8055908083916 MULTI CID FTMS 0 0 0 10698 376001.21875 0.3665336321238879 -1 0.0056610107421875 2 Carbamidomethyl (C) _IMKC(Carbamidomethyl (C))TCTNERE_ ENSG00000156735|ENST00000287322|BAG4;nc|ENSG00000156735|O95429-2|BAG4 15.248480904072842 0.7179608125786238 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]QT[HM]A 9 -1 59.045 0.0 0.0 4.2675 0.0 0.0 0.0 394.1407265467933 394.1407265467933 29.693314930970224 0.0 0.0 0.0 0 1.5 1.6989700043360187 1.6861818737241734 0.555462187404089 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]QT[HM]A 4.2675 - 7182 1 1.546 130892.3 1.0 5370 5328 10698 HBL1_DMSO_200M_050219_1,10700 HBL1_DMSO_200M_050219_1,10700,IMKCTCTNERE False False AYYAPGYTQTSY 55.683379 692.805590808392 14315001.0 10698.0 ENSG00000156735|ENST00000287322|BAG4;;nc|ENSG00000156735|O95429-2|BAG4 6.892000198364258 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10701 55.685 33.0 1903800.0 25 0 204470.0 + -1 FASADMVRA 9 82 492.23294159170655 982.4513302502132 2 492.2325317263603 MULTI CID FTMS 0 0 0 10698 1367187.875 0.718138462178883 2 -0.1692771911621093 3 Oxidation (M) _FASADM(Oxidation (M))VRA_ REV__ENSG00000158062|ENST00000374222|UBXN11;REV__nc|ENSG00000158062|Q5T124-2|UBXN11;REV__nc|ENSG00000158062|Q5T124-3|UBXN11;REV__nc|ENSG00000158062|Q5T124-4|UBXN11;REV__nc|ENSG00000158062|Q5T124-5|UBXN11;REV__nc|ENSG00000158062|Q5T124-8|UBXN11 10.823927491677226 0.5436922275383211 3 DP{[CP]|[EA]} 4 -1 20.005 0.0 0.0 2.0362 0.0 0.0 552.2662337229227 0.0 552.2662337229227 0.0 8.015384402724592 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 DP{[CP]|[EA]} 2.0362 - 99 1 1.546 54067.5 1.0 5371 5328 10698 HBL1_DMSO_200M_050219_1,10701 HBL1_DMSO_200M_050219_1,10701,FASADMVRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10702 55.688 187.0 563620.0 25 0 69874.0 + 22500 LPVRGVEV 8 97 434.7657149263287 867.5168769194573 2 434.7657958865166 MULTI CID FTMS 0 0 0 10698 361236.3125 0.4230053517327629 -1 0.0056610107421875 4 Unmodified _LPVRGVEV_ ENSG00000113621|ENST00000358387|TXNDC15;nc|ENSG00000113621|Q96J42-2|TXNDC15 49.93300154707207 0.1395624531867191 3 {I|L}PV 3 5 36.515 0.0 0.0 4.2092 0.0 0.0 0.0 555.2913912408811 555.2913912408811 9.106056125004828 0.0 0.0 0.0 0 0.2614393726401688 1.3979400086720375 0.0 0.0 + {I|L}PV 4.2092 + + 130 + 1 1.546 87521.3 1.0 5372 5328 10698 HBL1_DMSO_200M_050219_1,10702 HBL1_DMSO_200M_050219_1,10702,LPVRGVEV False True LPVRGVEV 55.688148 434.765795886517 5854560.0 10698.0 nc|ENSG00000113621|Q96J42-2|TXNDC15;;ENSG00000113621|ENST00000358387|TXNDC15 4.885161876678467 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10703 55.699 627.0 166750.0 25 0 43310.0 -1 0 37 1129.4642236933064 3385.370841680119 3 1130.132617175579 MULTI CID FTMS 0 0 0 10698 359397.46875 0.2155016700147911 -3 0.1197319030761718 5 3 E 1 -1 6.9897 0.0 0.0 0.20647 0.0 0.0 2729.142099847704 524.1613253229124 3253.3034251706167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20647 - 4 + 1 1.546 94598.5 1.0 5373 5328 10698 HBL1_DMSO_200M_050219_1,10703 HBL1_DMSO_200M_050219_1,10703, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10704 55.702 164.0 351430.0 25 0 21280.0 + 13567 HPHPFLNSV 9 122 524.2714449851027 1046.5283370370053 2 524.2722045779228 MULTI CID FTMS 0 0 0 10698 353863.09375 0.4922001644257707 4 -0.343963623046875 6 Unmodified _HPHPFLNSV_ ENSG00000104903|ENST00000264824|LYL1 47.74868867922204 0.0453060283459952 3 {I|L}NW 3 7 28.5 0.0 0.0 2.7233 0.0 0.0 615.2938709943375 0.0 615.2938709943375 0.0 14.222568361746475 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}NW 2.7233 - 199 1 1.546 51155.9 1.0 5374 5328 10698 HBL1_DMSO_200M_050219_1,10704 HBL1_DMSO_200M_050219_1,10704,HPHPFLNSV True True HPHPFLNSV 55.702365 524.272204577923 8172124.5 10698.0 ENSG00000104903|ENST00000264824|LYL1 8.349844932556152 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10705 55.708 314.0 432320.0 25 0 36844.0 + 15954 ITAKSKTITL 10 152 359.2288509342786 1074.664723403036 3 359.2282592654228 MULTI CID FTMS 0 0 0 10698 220771.390625 0.9952269236331024 -1 0.0056610107421875 7 Unmodified _ITAKSKTITL_ ENST00000497765.1_1_3:183515808-183519351:+|nuORF 10.898955630103616 0.6646681216928481 3 T{I|L} 2 8 16.242 0.0 0.0 1.5114 0.0 0.0 842.521624503425 0.0 842.521624503425 0.0 5.757659435244737 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + T{I|L} 1.5114 + + 140 + 1 1.546 115842.2 1.0 5375 5328 10698 HBL1_DMSO_200M_050219_1,10705 HBL1_DMSO_200M_050219_1,10705,ITAKSKTITL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10706 55.721 771.0 269510.0 25 0 29621.0 -1 0 89 1075.437751877973 3223.291426234119 3 1075.767138659954 MULTI CID FTMS 0 0 0 10698 190545.15625 0.4587859755217134 -1 0.0056610107421875 8 3 VTVAD 5 -1 36.049 0.0 0.0 1.1184 0.0 0.0 2369.800167544469 365.21894251041255 2735.0191100548814 0.0 0.0 0.0 0.0 0 0.0 0.0 1.8001648626366045 0.0 VTVAD 1.1184 - 1976 + 1 1.546 154304.1 1.0 5376 5328 10698 HBL1_DMSO_200M_050219_1,10706 HBL1_DMSO_200M_050219_1,10706, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10707 55.732 611.0 194980.0 25 0 40944.0 + -1 SLQSDVIGCDE 11 133 611.768898842001 1221.523244750802 2 611.7698852419853 MULTI CID FTMS 0 0 0 10698 198149.65625 0.5024399377685916 -1 0.0056610107421875 9 Carbamidomethyl (C) _SLQSDVIGC(Carbamidomethyl (C))DE_ REV__ENSG00000116726|ENST00000357726|PRAMEF12 14.40537977576856 0.7354982482299568 3 {[TV]|[{I|L}S]}[DN]TV{I|L} 7 -1 38.28 0.0 0.0 3.1338 0.0 0.0 0.0 476.1127176082194 476.1127176082194 10.99948217190132 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.9361818737241727 0.0 {[TV]|[{I|L}S]}[DN]TV{I|L} 3.1338 - 3655 1 1.546 91368.2 1.0 5377 5328 10698 HBL1_DMSO_200M_050219_1,10707 HBL1_DMSO_200M_050219_1,10707,SLQSDVIGCDE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10708 55.746 800.0 284040.0 25 0 33704.0 + 27196 PGGPAQLL 8 233 376.7174704608166 751.4203879884333 2 376.7173950076103 MULTI CID FTMS 0 0 0 10698 183715.28125 0.4868505631225805 -1 0.0056610107421875 10 Unmodified _PGGPAQLL_ REV__ENSG00000110719|ENST00000265686|TCIRG1;REV__ENST00000533947.1_1_11:67808738-67810499:+|nuORF 5.760428011301431 0.7893668129297577 3 {[YC]|[HE]}Q{I|L}{I|L}{I|L} 6 -1 + 22.338 0.0 0.0 2.9728 2.9728 66.993 0.0 0.0 0.0 0.152405929883983 6.478174818886375 0.152405929883983 0.152405929883983 0 0.2215141619232908 0.0 0.6861818737241735 0.3807196863200844 {[YC]|[HE]}Q{I|L}{I|L}{I|L};[H{I|L}]EQ{I|L}{I|L};{[YC]|[HE]}{I|L}Q{I|L}{I|L};{[YC]|[HE]}[AG]{I|L}{I|L}{I|L};[H{I|L}]E[AG]{I|L}{I|L};{[YC]|[HE]}{I|L}[AG]{I|L}{I|L};[Q{I|L}]EH{I|L}{I|L} 2.9728;2.9525;2.3889;1.2125;1.1922;0.62863;0.45368 -;-;-;-;-;-;- 174 1 1.546 176934.5 0.959999978542328 5378 5328 10698 HBL1_DMSO_200M_050219_1,10708 HBL1_DMSO_200M_050219_1,10708,PGGPAQLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10709 55.76 709.0 190290.0 25 0 15676.0 + 18043 KTAAEDAIRNL 11 139 601.3300869800249 1200.6456210268498 2 601.3310424685478 MULTI CID FTMS 0 0 0 10698 181671.109375 0.4821412102885976 -1 0.0056610107421875 11 Unmodified _KTAAEDAIRNL_ ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4;nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-4|RBM4 57.47667514258094 0.0793859511823193 3 KTAAEDA{I|L}[RV]Q 11 2 + 96.846 0.0 0.0 8.0662 8.0662 92.207 0.0 0.0 0.0 16.575773191777927 8.917279115488185 8.917279115488185 8.917279115488185 0 2.721848749616356 0.0 0.4247425010840047 0.6109243748081782 KTAAEDA{I|L}[RV]Q;KTAAEDA{I|L}[RN]{I|L};KTAT{I|L}ADE[KP]Q;KTAAED[{I|L}T][KP]Q;KTAAEDA{I|L}TK[PG];K{[QD]|[EN]|[WG]|[KD]|[RS]}EDA{I|L}[RV]Q;KT[RD]DA{I|L}[RV]Q;KTAT[W{I|L}]E[KP]Q;{I|L}AS[QT]DA{I|L}[RV]Q;KTAA[{I|L}T]DE[KP]Q 8.0662;7.3235;6.1273;6.1008;5.8336;5.5733;5.5367;5.4835;5.4293;5.4267 -;+;-;-;-;-;-;-;-;- + 2264 + 1 1.546 99744.4 1.0 5379 5328 10698 HBL1_DMSO_200M_050219_1,10709 HBL1_DMSO_200M_050219_1,10709,KTAAEDAIRNL True True KTAAEDAIRNL 55.759756 601.331042468548 2071047.375 10698.0 ENSG00000173914|ENST00000310046|RBM4B;;nc|ENSG00000173933|Q9BWF3-4|RBM4;;ENSG00000173933|ENST00000310092|RBM4;;nc|ENSG00000173933|Q9BWF3-3|RBM4;;nc|ENSG00000173933|Q9BWF3-2|RBM4 6.828004837036133 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10711 55.764 2.4 11099000.0 25 0 1051400.0 + 3268 AYHELAQVY 9 49 547.269151839691 1092.5237507461818 2 547.2698242068291 MULTI CID FTMS 0 0 0 10710 31548868.0 1.0 0 0.0 1 Unmodified _AYHELAQVY_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 20.453626601364224 0.2830276176381075 3 E{I|L}AQVY 6 3 35.846 0.0 0.0 3.2811 0.0 0.0 371.1598683087906 0.0 371.1598683087906 0.0 18.8566032266867 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.0 + E{I|L}AQVY 3.2811 + + 32 1 1.537 28792.4 1.0 5380 5329 10710 HBL1_DMSO_200M_050219_1,10711 HBL1_DMSO_200M_050219_1,10711,AYHELAQVY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10712 55.765 12.0 2912400.0 25 0 459210.0 -1 MIEPPVQV 8 65 464.74259170090994 927.47063046862 2 464.7427245974541 MULTI CID FTMS 0 0 0 10710 6965102.5 0.6533001913817794 5 -0.4345550537109375 2 Oxidation (M) _M(Oxidation (M))IEPPVQV_ nc|ENSG00000196663|O15040-2|TECPR2 14.581692164780916 0.6954967302934248 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVP 5 -1 35.234 0.0 0.0 3.7989 0.0 0.0 0.0 339.1677479276848 339.1677479276848 20.541134294324124 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3807196863200844 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVP 3.7989 - 73 1 1.537 34495.9 1.0 5381 5329 10710 HBL1_DMSO_200M_050219_1,10712 HBL1_DMSO_200M_050219_1,10712,MIEPPVQV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10713 55.766 12.0 2237300.0 25 0 267550.0 + 28605 PVDKPGPSI 9 59 455.2557361064309 908.4969192796618 2 455.2558471560478 MULTI CID FTMS 0 0 0 10710 4669834.0 0.2128472998334718 -4 0.2097434997558593 3 Unmodified _PVDKPGPSI_ REV__ENSG00000076356|ENST00000367033|PLXNA2 16.942295170755138 0.3780752226737986 3 PR[RP]{I|L} 5 -1 15.229 0.0 0.0 1.6763 0.0 0.0 271.10264545329306 0.0 271.10264545329306 0.0 12.015449934959715 0.0 0.0 0 0.0 0.0 0.0 0.0 PR[RP]{I|L} 1.6763 - 56 + 1 1.537 26239.1 1.0 5382 5329 10710 HBL1_DMSO_200M_050219_1,10713 HBL1_DMSO_200M_050219_1,10713,PVDKPGPSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10714 55.767 16.0 3707200.0 25 0 661560.0 + 3154 AVSDGVIKV 9 72 444.26330523881774 886.5120575444355 2 444.2636291384697 MULTI CID FTMS 0 0 0 10710 4274883.0 1.0 0 0.0 4 Unmodified _AVSDGVIKV_ ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF 25.399314129420983 0.2080152500878129 3 {[VA]|[{I|L}G]}TTR{I|L}K 7 5 34.015 0.0 0.0 3.8369 0.0 0.0 0.0 114.05683313541248 114.05683313541248 20.809932190414244 0.0 0.0 0.0 0 0.6435078169319297 2.0 0.0 0.0 {[VA]|[{I|L}G]}TTR{I|L}K 3.8369 - 81 + 1 1.537 51057.0 1.0 5383 5329 10710 HBL1_DMSO_200M_050219_1,10714 HBL1_DMSO_200M_050219_1,10714,AVSDGVIKV False True AVSDGVIKV 55.767479 444.26362913847 27407550.0 10710.0 ENSG00000172757|ENST00000308162|CFL1;;ENST00000530945.1_1_11:65623404-65625570:-|nuORF 3.49472177028656 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10715 55.769 28.0 1297600.0 25 0 125460.0 + 22043 LPPPPPPHL 9 47 482.7845332676538 963.5545136021076 2 482.7846252322197 MULTI CID FTMS 0 0 0 10710 2470891.75 0.9746923899165212 -11 0.8621597290039062 5 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 45.7499826716795 0.0496882803020414 3 {I|L}PPPPPP[H{I|L}] 9 0 + 77.101 0.0 0.0 8.0017 8.0017 95.743 0.0 0.0 0.0 70.11107503885448 7.147642715192504 7.147642715192504 17.447274948966935 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPPPPP[H{I|L}];{I|L}PPP[YK][H{I|L}];{I|L}PP[YK]P[H{I|L}];{I|L}P[YK]PP[H{I|L}];{I|L}[YK]PPP[H{I|L}];{I|L}[YK][YK][H{I|L}] 8.0017;6.191;6.191;5.6958;3.1794;1.3757 +;-;-;-;-;- + 62 + 1 1.537 34578.5 1.0 5384 5329 10710 HBL1_DMSO_200M_050219_1,10715 HBL1_DMSO_200M_050219_1,10715,LPPPPPPHL True True LPPPPPPHL 55.768658 482.78462523222 117536196.0 10710.0 ENSG00000108349|ENST00000264645|CASC3 7.812749226888019 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10716 55.77 22.0 1512300.0 25 0 186990.0 + 29788 QPYYPQHPMV 10 58 630.2973941259904 1258.5802353187808 2 630.2974731326103 MULTI CID FTMS 0 0 0 10710 2461623.5 1.0 0 0.0 6 Unmodified _QPYYPQHPMV_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 15.847184025352805 0.5816416552707754 3 H[{M(Oxidation (M))|F}E]HP{[ET]|[MV]} 7 6 11.203 0.0 0.0 0.89009 0.0 0.0 363.1814214166664 0.0 363.1814214166664 0.0 4.212819689744976 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 H[{M(Oxidation (M))|F}E]HP{[ET]|[MV]} 0.89009 - 78 + 1 1.537 30848.4 1.0 5385 5329 10710 HBL1_DMSO_200M_050219_1,10716 HBL1_DMSO_200M_050219_1,10716,QPYYPQHPMV False True QPYYPQHPMV 55.769835 630.29747313261 15876225.0 10710.0 nc|ENSG00000101096|Q13469|NFATC2;;nc|ENSG00000101096|Q13469-5|NFATC2;;nc|ENSG00000101096|Q13469-4|NFATC2;;ENSG00000101096|ENST00000371564|NFATC2;;nc|ENSG00000101096|Q13469-3|NFATC2 6.7137735684712725 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10717 55.771 32.0 1835700.0 25 0 297360.0 + 44624 YPFKPPKV 8 77 325.86048683472575 974.5596311043772 3 325.8601867556572 MULTI CID FTMS 0 0 0 10710 1835027.5 0.0237906011964665 -38 3.580921173095703 7 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 15.847184025352805 0.6768015514314958 3 YP{M(Oxidation (M))|F}KPP{[QV]|[N{I|L}]|[RA]|[KV]} 8 0 + 40.355 0.0 0.0 4.1408 4.1408 85.044 0.0 0.0 0.0 30.17728766960431 3.098943791441968 3.098943791441968 26.70941280735775 0 0.0 0.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPP{[QV]|[N{I|L}]|[RA]|[KV]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 4.1408;1.4001 +;- + 91 + 1 1.537 53075.8 1.0 5386 5329 10710 HBL1_DMSO_200M_050219_1,10717 HBL1_DMSO_200M_050219_1,10717,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10718 55.773 95.0 764640.0 25 0 52586.0 + 4274 DAQQTQLRI 9 103 536.7906489723093 1071.5667450114186 2 536.7913085818291 MULTI CID FTMS 0 0 0 10710 1308533.25 1.0 0 0.0 8 Unmodified _DAQQTQLRI_ ENSG00000134899|ENST00000652225|ERCC5;nc|ENSG00000134899|P28715-2|ERCC5 92.65332237495696 0.0139087009896299 3 {[DA]|[EG]}QQTQ{I|L}R{I|L} 9 0 + 94.425 0.0 0.0 8.8119 8.8119 94.272 0.0 0.0 0.0 69.64870798122475 11.706962271689749 11.706962271689749 9.208187539523747 0 0.7302046884880937 2.0 0.9247425010840048 1.2803695511246984 + + {[DA]|[EG]}QQTQ{I|L}R{I|L};{[DA]|[EG]}[AG]QTQ{I|L}R{I|L};{[DA]|[EG]}QQT[AG]{I|L}R{I|L};{[DA]|[EG]}Q[AG]TQ{I|L}R{I|L};{[DA]|[EG]}[AG]QT[AG]{I|L}R{I|L};{[DA]|[EG]}Q[AG]T[AG]{I|L}R{I|L};{[DA]|[EG]}[AG][AG]TQ{I|L}R{I|L};{[DA]|[EG]}QQ{I|L}[QT]R{I|L};{[DA]|[EG]}Q{I|L}Q[QT]R{I|L};{[DA]|[EG]}QQ{I|L}V[{I|L}T]{[QG]|[NA]} 8.8119;7.9525;7.9525;7.9525;7.0973;7.0973;7.0973;6.3473;5.7813;5.6273 +;-;-;-;-;-;-;-;-;- + 351 + 1 1.537 62585.7 1.0 5387 5329 10710 HBL1_DMSO_200M_050219_1,10718 HBL1_DMSO_200M_050219_1,10718,DAQQTQLRI True True DAQQTQLRI 55.773104 536.791308581829 8419443.0 10710.0 nc|ENSG00000134899|P28715-2|ERCC5;;ENSG00000134899|ENST00000652225|ERCC5 5.381412347157796 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10719 55.774 53.0 1484000.0 25 0 255500.0 + 36140 SVVDHFNRI 9 77 362.86128109174535 1085.5620138754362 3 362.8609802126884 MULTI CID FTMS 0 0 0 10710 1306137.0 0.0912692254074977 -2 0.095672607421875 9 Unmodified _SVVDHFNRI_ ENSG00000103035|ENST00000219313|PSMD7;ENST00000422197.2_1_1:51837944-51838202:+|nuORF;ENST00000566015.1_1_16:74330767-74334139:+|nuORF 29.081581746732265 0.1611639662936252 3 [VS]VDH{M(Oxidation (M))|F}{I|L}[RN] 9 2 + 69.103 0.0 0.0 6.3656 6.3656 81.905 0.0 0.0 0.0 36.866903183326514 4.232712163289278 4.232712163289278 3.0102999566398125 0 0.4247425010840047 2.0 0.7742275032520141 0.0 [VS]VDH{M(Oxidation (M))|F}{I|L}[RN];[VS]VDH{I|L}{M(Oxidation (M))|F}[RN];[VS]V{I|L}DH{M(Oxidation (M))|F}[RN];[VS]VD{I|L}H{M(Oxidation (M))|F}[RN];[VS]{I|L}VDH{M(Oxidation (M))|F}[RN] 6.3656;6.0883;5.8844;5.811;5.6359 -;-;-;-;- 154 + 1 1.537 72013.9 1.0 5388 5329 10710 HBL1_DMSO_200M_050219_1,10719 HBL1_DMSO_200M_050219_1,10719,SVVDHFNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10720 55.777 112.0 416030.0 25 0 26173.0 + 35331 STAAKIMGV 9 81 439.2443584897241 876.4741640462481 2 439.2440673708916 MULTI CID FTMS 0 0 0 10710 1009300.5625 0.4330736541250371 3 -0.2539520263671875 10 Unmodified _STAAKIMGV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 48.345845343767074 0.0439967357579942 3 {[MG]|[TS]}AAY{I|L}AAG 9 4 31.865 0.0 0.0 3.6356 0.0 0.0 0.0 68.05145441226796 68.05145441226796 16.982522177562203 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[MG]|[TS]}AAY{I|L}AAG 3.6356 - 175 + 1 1.537 44360.4 1.0 5389 5329 10710 HBL1_DMSO_200M_050219_1,10720 HBL1_DMSO_200M_050219_1,10720,STAAKIMGV True True STAAKIMGV 55.776806 439.244067370892 27305462.0 10710.0 ENST00000466404.5_1_19:54621832-54631576:+|nuORF;;nc|ENSG00000105618|Q8WWY3-3|PRPF31;;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;;nc|ENSG00000105618|Q8WWY3-2|PRPF31;;ENSG00000105618|ENST00000321030|PRPF31;;nc|ENSG00000105618|Q8WWY3-4|PRPF31 6.032185395558675 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10721 55.78 149.0 483260.0 25 0 52527.0 + -1 YFYGGLMTTQF 11 73 672.3044815370328 1342.5944101408654 2 672.3048583865166 MULTI CID FTMS 0 0 0 10710 976734.6875 1.0 0 0.0 11 Oxidation (M) _YFYGGLM(Oxidation (M))TTQF_ REV__ENSG00000156006|ENST00000286479|NAT2 18.1463463914782 0.6576820063886638 3 WWQQ{M(Oxidation (M))|F}Y{M(Oxidation (M))|F} 7 -1 20.705 0.0 0.0 1.5422 0.0 0.0 239.0914478986344 0.0 239.0914478986344 0.0 6.725854973598189 0.0 0.0 0 0.242992819099939 0.0 0.0 0.0 WWQQ{M(Oxidation (M))|F}Y{M(Oxidation (M))|F} 1.5422 - 158 1 1.537 55318.7 1.0 5390 5329 10710 HBL1_DMSO_200M_050219_1,10721 HBL1_DMSO_200M_050219_1,10721,YFYGGLMTTQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10722 55.782 114.0 1006500.0 25 0 115550.0 + 3419 AYYAGHVL 8 108 447.229496796494 892.444440659788 2 447.2299072146416 MULTI CID FTMS 0 0 0 10710 738571.3125 1.0 0 0.0 12 Unmodified _AYYAGHVL_ ENSG00000127054|ENST00000435064|INTS11;ENST00000421495.6_1_1:1249445-1259984:-|nuORF;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;ENST00000526113.1_1_1:1250782-1259984:-|nuORF;ENST00000526904.5_1_1:1250884-1259984:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 24.20995872069341 0.5349487244130675 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y 3 5 31.695 0.0 0.0 3.5514 0.0 0.0 0.0 492.2589510553344 492.2589510553344 20.268024924119672 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y 3.5514 + + 152 + 1 1.537 96403.6 1.0 5391 5329 10710 HBL1_DMSO_200M_050219_1,10722 HBL1_DMSO_200M_050219_1,10722,AYYAGHVL False True AYYAGHVL 55.782168 447.229907214642 3304732.5 10710.0 nc|ENSG00000127054|Q5TA45-4|INTS11;;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;;ENSG00000127054|ENST00000435064|INTS11;;nc|ENSG00000127054|Q5TA45-2|INTS11;;ENST00000421495.6_1_1:1249445-1259984:-|nuORF;;nc|ENSG00000127054|Q5TA45-5|INTS11;;ENST00000526113.1_1_1:1250782-1259984:-|nuORF;;ENST00000526904.5_1_1:1250884-1259984:-|nuORF 3.0559898217519126 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10723 55.785 122.0 427180.0 25 0 83368.0 + 39139 TYLETKGAAL 10 79 533.7936850752492 1065.5728172172985 2 533.7932617068291 MULTI CID FTMS 0 0 0 10710 566190.3125 1.0 0 0.0 13 Unmodified _TYLETKGAAL_ ENSG00000135931|ENST00000611582|ARMC9;nc|ENSG00000135931|Q7Z3E5-2|ARMC9 32.78568957990786 0.2337485590374503 3 [YT]{I|L}ET[KQ]A{I|L} 9 2 + 57.374 0.0 0.0 5.3843 5.3843 88.995 0.0 0.0 0.0 41.896964549040376 2.8533500713746207 2.8533500713746207 24.94850021680093 0 0.4247425010840047 2.0 0.805462187404089 0.0 [YT]{I|L}ET[KQ]A{I|L};[KT][KT]TE{I|L}[{M(Oxidation (M))|F}V];[KT][QA]E{I|L}{I|L}TY;[KT][KT][DP]{I|L}TY 5.3843;3.043;0.56149;0.21435 -;-;-;- 109 + 1 1.537 43491.7 1.0 5392 5329 10710 HBL1_DMSO_200M_050219_1,10723 HBL1_DMSO_200M_050219_1,10723,TYLETKGAAL False True TYLETKGAAL 55.784697 533.793261706829 3658791.75 10710.0 ENSG00000135931|ENST00000611582|ARMC9;;nc|ENSG00000135931|Q7Z3E5-2|ARMC9 5.353386561075847 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10724 55.789 200.0 430270.0 25 0 64615.0 + 36306 SYLDRTEQL 9 105 562.7823493761304 1123.5501458190606 2 562.7826415896416 MULTI CID FTMS 0 0 0 10710 599417.75 1.0 0 0.0 14 Unmodified _SYLDRTEQL_ ENSG00000065268|ENST00000585809|WDR18 55.50274090549119 0.0285720310785888 3 MD{I|L}[MT] 5 7 27.747 0.0 0.0 2.4696 0.0 0.0 514.3079701154312 0.0 514.3079701154312 0.0 0.8868910397398295 0.0 0.0 0 0.4247425010840047 0.0 0.7302046884880937 0.0 MD{I|L}[MT] 2.4696 - 221 1 1.537 72771.9 1.0 5393 5329 10710 HBL1_DMSO_200M_050219_1,10724 HBL1_DMSO_200M_050219_1,10724,SYLDRTEQL True True SYLDRTEQL 55.788531 562.782641589642 4141987.0 10710.0 chr19:993863-994020|12|14.17|0.65|4.44|+|0|None,WDR18|1;;ENSG00000065268|ENST00000585809|WDR18 7.549662431081136 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10725 55.79 68.0 715300.0 25 0 58233.0 + 2837 AVAKHFVAL 9 91 478.29015710095695 954.565761268714 2 478.2898437380791 MULTI CID FTMS 0 0 0 10710 480899.09375 1.0 0 0.0 15 Unmodified _AVAKHFVAL_ CON__Q3ZBD7;ENSG00000105220|ENST00000356487|GPI;nc|ENSG00000105220|P06744-2|GPI 39.94969957227396 0.0757326808254658 3 {[VA]|[{I|L}G]}{I|L}[YK]PPD 8 6 43.063 0.0 0.0 4.5113 0.0 0.0 0.0 68.05146204166249 68.05146204166249 19.33980299335034 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.6643943297944485 0.0 {[VA]|[{I|L}G]}{I|L}[YK]PPD 4.5113 - 179 + 1 1.537 44764.2 1.0 5394 5329 10710 HBL1_DMSO_200M_050219_1,10725 HBL1_DMSO_200M_050219_1,10725,AVAKHFVAL True True AVAKHFVAL 55.790151 478.289843738079 3437314.75 10710.0 Q3ZBD7;;ENSG00000105220|ENST00000356487|GPI;;nc|ENSG00000105220|P06744-2|GPI 5.54935884475708 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 10726 55.799 501.0 258870.0 25 0 17555.0 + 44839 YPNYPNPAV 9 155 517.7508226068903 1033.4870922805806 2 517.7506591677666 MULTI CID FTMS 0 0 0 10710 379124.4375 0.682607899133224 -4 0.2097434997558593 16 Unmodified _YPNYPNPAV_ ENSG00000129173|ENST00000250024|E2F8 23.1484247019978 0.2366544122328345 3 [TP]VCHPN 7 7 19.73 0.0 0.0 1.9091 0.0 0.0 0.0 282.14450304454857 282.14450304454857 2.4846051852922137 0.0 0.0 0.0 0 0.4247425010840047 0.7958800173440752 0.1171302707394362 0.2742275032520141 [TP]VCHPN 1.9091 - 964 1 1.537 114836.7 1.0 5395 5329 10710 HBL1_DMSO_200M_050219_1,10726 HBL1_DMSO_200M_050219_1,10726,YPNYPNPAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10727 55.804 293.0 178580.0 25 0 19160.0 11425 GGSVDLFH 8 93 416.20359419672775 830.3926354602555 2 415.7346069216728 MULTI CID FTMS 0 0 0 10710 188898.3125 0.7689513282967979 3 -0.2539520263671875 17 Unmodified _GGSVDLFH_ ENSG00000222028|ENST00000408907|PSMB11 14.581692164780916 0.6954967302934248 3 [DN]T{M(Oxidation (M))|F}VHV 7 7 [DN]T + + 16.623 13.952 4.2265 2.0019 2.0019 48.848 0.0 0.0 0.0 0.0 2.670986162451728 0.0 0.0 0 0.0 0.0 0.0 0.0 [DN]T{M(Oxidation (M))|F}VHV 2.0019 - 23 + 1 1.537 49002.2 1.0 5396 5329 10710 HBL1_DMSO_200M_050219_1,10727 HBL1_DMSO_200M_050219_1,10727,GGSVDLFH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10728 55.814 561.0 342650.0 25 0 22742.0 + 22068 LPPPPRYTV 9 169 520.2999722626957 1038.5853915921914 2 520.3005248904228 MULTI CID FTMS 0 0 0 10710 288912.84375 1.0 0 0.0 18 Unmodified _LPPPPRYTV_ ENSG00000168924|ENST00000302787|LETM1;ENST00000466175.5_1_4:1836565-1857677:-|nuORF;ENST00000512189.1_1_4:1848346-1857677:-|nuORF;nc|ENSG00000168924|O95202-3|LETM1 21.53697664764585 0.2571576504437394 3 {I|L}PPP 4 5 51.23 0.0 0.0 4.9327 0.0 0.0 0.0 631.3224121218843 631.3224121218843 39.24024714504206 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}PPP 4.9327 + + 248 + 1 1.537 152939.4 1.0 5397 5329 10710 HBL1_DMSO_200M_050219_1,10728 HBL1_DMSO_200M_050219_1,10728,LPPPPRYTV False True LPPPPRYTV 55.814216 520.300524890423 2692811.5 10710.0 ENST00000466175.5_1_4:1836565-1857677:-|nuORF;;ENST00000512189.1_1_4:1848346-1857677:-|nuORF;;ENSG00000168924|ENST00000302787|LETM1;;nc|ENSG00000168924|O95202-3|LETM1 4.470655043919881 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10729 55.826 706.0 244960.0 25 0 10026.0 38638 TTIKAFFPKK 10 228 394.2412955003985 1179.7020571013954 3 394.2427245974541 MULTI CID FTMS 0 0 0 10710 287893.03125 0.009700362768318 12 -1.0289688110351562 19 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 15.248480904072842 0.5916873121453583 3 TT{I|L}KY{I|L}WKK 9 4 + 66.703 0.0 0.0 5.6543 5.6543 88.995 0.0 0.0 0.0 52.22878764971071 9.803143743442206 9.803143743442206 16.228825992562385 0 0.2215141619232908 1.2218487496163564 0.0 0.3054621874040891 TT{I|L}KY{I|L}WKK;TT{I|L}KY{I|L}KKW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}{I|L}YK{I|L}SP 5.6543;4.2786;1.9521 -;-;- 393 + 1 1.537 140327.3 1.0 5398 5329 10710 HBL1_DMSO_200M_050219_1,10729 HBL1_DMSO_200M_050219_1,10729,TTIKAFFPKK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10730 55.839 646.0 94239.0 25 0 6256.0 + -1 VNRYFSRTICR 11 111 736.385030290474 1470.755507647748 2 736.3831054568291 MULTI CID FTMS 0 0 0 10710 228864.296875 1.0 0 0.0 20 Carbamidomethyl (C) _VNRYFSRTIC(Carbamidomethyl (C))R_ REV__ENSG00000188060|ENST00000465518|RAB42 5.296884461304476 0.8501568894076437 3 {M(Oxidation (M))|F}PSQSTNV{I|L} 9 -1 68.196 0.0 0.0 4.6368 0.0 0.0 479.24614150215 0.0 479.24614150215 0.0 50.00881859379293 0.0 0.0 0 0.2396518287104437 0.0 1.774227503252014 0.0 {M(Oxidation (M))|F}PSQSTNV{I|L} 4.6368 - 658 1 1.537 49855.6 1.0 5399 5329 10710 HBL1_DMSO_200M_050219_1,10730 HBL1_DMSO_200M_050219_1,10730,VNRYFSRTICR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10732 55.843 4.3 8989200.0 25 0 699790.0 + 13686 HQIEAVDGEEL 11 59 620.2963161633384 1238.5780793934766 2 620.2968627810478 MULTI CID FTMS 0 0 0 10731 12431552.0 0.603032715800793 1 -0.1032829284667968 1 Unmodified _HQIEAVDGEEL_ ENSG00000105404|ENST00000222008|RABAC1;ENST00000595226.1_1_19:42461000-42461518:-|nuORF 36.39500950444726 0.267929034476522 3 [HQ]{I|L}EAVDGEE{I|L} 11 0 + 77.396 0.0 0.0 6.2488 6.2488 90.366 0.0 0.0 0.0 8.476829400335959 43.48191384642074 8.476829400335959 13.209726536234657 0 0.7059771852360797 0.0 0.0 0.2614393726401688 + + [HQ]{I|L}EAVDGEE{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]AVDGEE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]AVDGEE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]AVDWE{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]AVDGT[RN];{[QN]|[E{I|L}]|[KN]}[HQ]{[RE]|[WV]}WE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]A[RD]EE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]{[RE]|[WV]}GEE{I|L};[C(Carbamidomethyl (C))K]TGDV{[MS]|[{M(Oxidation (M))|F}A]}[WR];{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]{[RE]|[WV]}WE{I|L} 6.2488;5.1823;4.1691;3.6382;3.0984;2.8531;2.3674;2.3674;2.1521;1.84 +;-;-;-;-;-;-;-;-;- + 268 1 1.537 33531.0 1.0 5400 5330 10731 HBL1_DMSO_200M_050219_1,10732 HBL1_DMSO_200M_050219_1,10732,HQIEAVDGEEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10733 55.844 9.5 4236400.0 25 0 552230.0 + 21886 LPPEVNRI 8 53 469.276764901342 936.538976869484 2 469.2772399783134 MULTI CID FTMS 0 0 0 10731 6371174.5 0.3562019313879161 9 -0.8270378112792969 2 Unmodified _LPPEVNRI_ ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 14.838274106304384 0.6917062315640577 3 {I|L}PPE 4 4 53.175 0.0 0.0 5.6779 0.0 0.0 0.0 497.28558593240456 497.28558593240456 46.18562527100117 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPE 5.6779 + + 28 + 1 1.537 39096.8 1.0 5401 5330 10731 HBL1_DMSO_200M_050219_1,10733 HBL1_DMSO_200M_050219_1,10733,LPPEVNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10734 55.846 14.0 5597600.0 25 0 671350.0 + 4151 DAPHPPLKI 9 93 494.284652859862 986.554752786524 2 494.2848083376884 MULTI CID FTMS 0 0 0 10731 4727224.5 0.1052595876086469 -8 0.5736808776855469 3 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 62.57269311338072 0.0246576765497938 3 {[DA]|[EG]}PHPP{I|L}K{I|L} 9 0 + 63.259 0.0 0.0 6.4122 6.4122 79.973 0.0 0.0 0.0 15.826958272274894 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 2.247425010840047 1.6989700043360187 0.0 0.3494850021680094 + + {[DA]|[EG]}PHPP{I|L}K{I|L};{[DA]|[EG]}PHPP{I|L}{I|L}K;{[DA]|[EG]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}K{I|L};{[DA]|[EG]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}{I|L}K;{I|L}{[CT]|[{M(Oxidation (M))|F}G]}CPP{I|L}K{I|L};{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]PP{I|L}K{I|L};{I|L}{[CT]|[{M(Oxidation (M))|F}G]}CPP{I|L}{I|L}K;{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]PP{I|L}{I|L}K;{I|L}W{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}K{I|L};{I|L}W{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}{I|L}K 6.4122;6.2337;4.081;3.9025;3.7527;3.7063;3.5742;3.5278;2.9435;2.765 +;-;-;-;-;-;-;-;-;- + 168 + 1 1.537 61507.9 1.0 5402 5330 10731 HBL1_DMSO_200M_050219_1,10734 HBL1_DMSO_200M_050219_1,10734,DAPHPPLKI True True DAPHPPLKI 55.845562 494.284808337688 4919708032.0 10731.0 ENSG00000104904|ENST00000602676|OAZ1 6.983196258544922 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10735 55.847 21.0 2129400.0 25 0 140330.0 + 5886 DPYKVYRI 8 71 527.2899528545865 1052.565352775973 2 527.2902709841728 MULTI CID FTMS 0 0 0 10731 3345782.25 0.3385780163967024 1 -0.1032829284667968 4 Unmodified _DPYKVYRI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 34.10243960390752 0.3329570729325616 3 DPYKV{I|L}[YR] 8 2 + 64.646 0.0 0.0 6.1418 6.1418 90.562 0.0 0.0 0.0 32.70812200728862 3.979400086720375 3.979400086720375 16.025684359364405 0 0.7302046884880937 1.5228787452803376 0.0 0.0 DPYKV{I|L}[YR];D{I|L}{M(Oxidation (M))|F}KV{I|L}[YR];{I|L}D{M(Oxidation (M))|F}KV{I|L}[YR] 6.1418;4.6193;4.3333 -;-;- 73 + 1 1.537 39084.9 1.0 5403 5330 10731 HBL1_DMSO_200M_050219_1,10735 HBL1_DMSO_200M_050219_1,10735,DPYKVYRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10736 55.848 28.0 2132600.0 25 0 136420.0 + 5884 DPYKVYRI 8 73 351.86252416148324 1052.5657430846495 3 351.8624450564384 MULTI CID FTMS 0 0 0 10731 2945316.25 0.3238199404828983 1 -0.1032829284667968 5 Unmodified _DPYKVYRI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 28.486842064014134 0.4448922141344407 3 DPYKVY[R{I|L}] 8 0 + 69.373 0.0 0.0 6.5909 6.5909 60.911 0.0 0.0 0.0 33.39948061694351 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.4247425010840047 + + DPYKVY[R{I|L}];DPYKV{I|L}[YR];DPYK{I|L}V[YR];DPY{I|L}KV[YR];DP{I|L}YKV[YR] 6.5909;6.5909;6.3049;6.0189;5.3293 +;-;-;-;- + 125 + 1 1.537 59422.9 1.0 5404 5330 10731 HBL1_DMSO_200M_050219_1,10736 HBL1_DMSO_200M_050219_1,10736,DPYKVYRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10737 55.849 33.0 3991900.0 25 0 383080.0 + 36143 SVVDHFNRI 9 110 543.7873303109742 1085.5601076887483 2 543.7886230349541 MULTI CID FTMS 0 0 0 10731 1919035.375 0.2412366494192136 -1 0.0792655944824218 6 Unmodified _SVVDHFNRI_ ENSG00000103035|ENST00000219313|PSMD7;ENST00000422197.2_1_1:51837944-51838202:+|nuORF;ENST00000566015.1_1_16:74330767-74334139:+|nuORF 66.45667989310934 0.0225072657982126 3 [VS]VDH{M(Oxidation (M))|F}NR{I|L} 9 0 + 83.029 0.0 0.0 7.6485 7.6485 92.464 0.0 0.0 0.0 46.84353900550198 6.751736484954378 6.751736484954378 9.208187539523747 0 1.524227503252014 2.0 0.7134679910804405 0.6549471895720984 + + [VS]VDH{M(Oxidation (M))|F}NR{I|L};[VS]VDH{M(Oxidation (M))|F}GGR{I|L};{I|L}[TA]DH{M(Oxidation (M))|F}NR{I|L};[VS]VD[VS][DP]R{I|L};{I|L}[TA]DH{M(Oxidation (M))|F}GGR{I|L};{I|L}{[WT]|[RM]}H{M(Oxidation (M))|F}NR{I|L};[VS]V[DV][VS]DV[PA];[VS]V[HS][YQ]V[PA];[VS]VDV[WP]VW;{I|L}{[WT]|[RM]}H{M(Oxidation (M))|F}GGR{I|L} 7.6485;6.8003;5.4149;4.6112;4.5666;3.8795;3.6713;3.5092;3.4845;3.0263 +;-;-;-;-;-;-;-;-;- + 297 + 1 1.537 107099.1 1.0 5405 5330 10731 HBL1_DMSO_200M_050219_1,10737 HBL1_DMSO_200M_050219_1,10737,SVVDHFNRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10738 55.85 48.0 786820.0 25 0 100710.0 + 22082 LPPPTPSQI 9 72 475.271559301882 948.528565670564 2 475.2726623415947 MULTI CID FTMS 0 0 0 10731 1490372.5 0.547405747848044 1 -0.1032829284667968 7 Unmodified _LPPPTPSQI_ ENSG00000083223|ENST00000375963|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 24.67388899826682 0.2172451872415813 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 7 7 + 25.986 0.0 0.0 2.7396 2.7396 49.723 0.0 0.0 0.0 1.883257154726934 1.883257154726934 1.883257154726934 0.0 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}WV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{I|L}P][HN]P{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}W[R{M(Oxidation (M))|F}]A;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W{I|L}[R{M(Oxidation (M))|F}]A;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[DA]|[EG]}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[DA]|[EG]}{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP][HQ]P{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 2.7396;2.7396;2.5411;1.7598;1.7598;1.7559;1.7559;0.013003 -;-;-;-;-;-;-;- 170 + 1 1.537 35640.7 1.0 5406 5330 10731 HBL1_DMSO_200M_050219_1,10738 HBL1_DMSO_200M_050219_1,10738,LPPPTPSQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10739 55.852 50.0 1379300.0 25 0 255780.0 + 41422 VPLFNIAKV 9 60 500.81100701204326 999.6074610908864 2 500.8112975955009 MULTI CID FTMS 0 0 0 10731 1303337.5 0.2597506322183955 1 -0.1032829284667968 8 Unmodified _VPLFNIAKV_ REV__ENSG00000204681|ENST00000377034|GABBR1;REV__nc|ENSG00000204681|Q9UBS5-3|GABBR1;REV__nc|ENSG00000204681|Q9UBS5-4|GABBR1;REV__nc|ENSG00000204681|Q9UBS5-5|GABBR1 32.30548876998284 0.1201446275138228 3 A{I|L}[EP]AVK 7 -1 32.836 0.0 0.0 3.2848 0.0 0.0 273.166230921185 0.0 273.166230921185 0.0 21.41556773571752 0.0 0.0 0 1.0 0.0 0.0 0.3494850021680094 A{I|L}[EP]AVK 3.2848 - 108 + 1 1.537 60004.5 1.0 5407 5330 10731 HBL1_DMSO_200M_050219_1,10739 HBL1_DMSO_200M_050219_1,10739,VPLFNIAKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10740 55.853 52.0 801740.0 25 0 65309.0 + 247 AAYQQSLTV 9 74 490.756193285015 979.49783363683 2 490.7563049197197 MULTI CID FTMS 0 0 0 10731 1293499.625 0.6857789498141942 -1 0.0792655944824218 9 Unmodified _AAYQQSLTV_ ENSG00000132522|ENST00000380728|GPS2;ENST00000571098.5_1_17:7217203-7218672:-|nuORF;ENST00000571695.1_1_17:7217390-7217998:-|nuORF;ENST00000571697.5_1_17:7217203-7217998:-|nuORF;ENST00000572363.5_1_17:7217390-7218672:-|nuORF;nc|ENSG00000132522|Q13227-2|GPS2 21.74664581756881 0.2544899275067181 3 RTV 3 7 23.5 0.0 0.0 2.3992 0.0 0.0 605.2746718710082 0.0 605.2746718710082 0.0 11.359921914233905 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 RTV 2.3992 - 90 + 1 1.537 39881.2 1.0 5408 5330 10731 HBL1_DMSO_200M_050219_1,10740 HBL1_DMSO_200M_050219_1,10740,AAYQQSLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10741 55.855 66.0 943680.0 25 0 144650.0 + 26937 PDVAAVHQYHR 11 67 646.8271245506494 1291.639696168099 2 646.8276855349541 MULTI CID FTMS 0 0 0 10731 919253.625 0.7730276231722788 1 -0.1032829284667968 10 Unmodified _PDVAAVHQYHR_ REV__ENSG00000105290|ENST00000221891|APLP1;REV__ENST00000589298.2_1_19:36365420-36369433:+|nuORF;REV__nc|ENSG00000105290|P51693|APLP1 9.38312468134398 0.8308777417566128 3 [PS]VTSV 6 -1 27.401 0.0 0.0 2.1214 0.0 0.0 0.0 718.3142356309297 718.3142356309297 5.221609587005389 0.0 0.0 0.0 0 0.0 0.0 1.7302046884880935 0.0 [PS]VTSV 2.1214 - 296 1 1.537 52012.9 1.0 5409 5330 10731 HBL1_DMSO_200M_050219_1,10741 HBL1_DMSO_200M_050219_1,10741,PDVAAVHQYHR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10742 55.856 79.0 1211900.0 25 0 147820.0 + 35105 SQVTVAVRV 9 107 479.7882948170655 957.562036700931 2 479.7883483767509 MULTI CID FTMS 0 0 0 10731 706683.875 0.7863938354530443 -1 0.0792655944824218 11 Unmodified _SQVTVAVRV_ ENSG00000118193|ENST00000367350|KIF14 69.10491478415734 0.0214449631113747 3 {[QS]|[NT]}VVTAVRV 9 2 + 63.237 0.0 0.0 6.604 6.604 77.651 0.0 0.0 0.0 49.53476655068661 13.847178924442488 13.847178924442488 0.0443219174010778 0 1.0 0.9208187539523752 0.6861818737241735 0.2887254899964357 {[QS]|[NT]}VVTAVRV;{[QS]|[NT]}VTVAVRV;{[QS]|[NT]}VT[R{I|L}]RV;{[QS]|[NT]}V[{I|L}A]SVRV;{[QS]|[NT]}[K{I|L}]EVRV 6.604;6.5994;4.6063;4.3397;2.0612 -;+;-;-;- + 204 + 1 1.537 80767.4 1.0 5410 5330 10731 HBL1_DMSO_200M_050219_1,10742 HBL1_DMSO_200M_050219_1,10742,SQVTVAVRV True True SQVTVAVRV 55.856461 479.788348376751 5438424.0 10731.0 ENSG00000118193|ENST00000367350|KIF14 5.966962496439616 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10743 55.86 164.0 1335300.0 25 0 95111.0 + 21527 LPIQPAQHI 9 161 508.7984821326804 1015.5824113321607 2 508.7986938357353 MULTI CID FTMS 0 0 0 10731 517391.46875 0.3252199918677947 1 -0.1032829284667968 12 Unmodified _LPIQPAQHI_ ENSG00000116044|ENST00000397062|NFE2L2;ENST00000462023.1_1_2:178098693-178129304:-|nuORF;ENST00000477534.1_1_2:178098693-178128139:-|nuORF;nc|ENSG00000116044|Q16236-2|NFE2L2;nc|ENSG00000116044|Q16236-3|NFE2L2 100.37149154755038 0.0107586824602606 3 {I|L}P{I|L}QPAQH{I|L} 9 0 + 89.227 0.0 0.0 8.7858 8.7858 92.339 0.0 0.0 0.0 26.724833804985963 7.63427993562938 7.63427993562938 7.63427993562938 0 1.885151878060192 2.0 0.0 1.16944517631652 + + {I|L}P{I|L}QPAQH{I|L};{I|L}P{I|L}QPAQ{I|L}H;{I|L}P{I|L}[AG]PAQH{I|L};{I|L}P{I|L}QPA[AG]H{I|L};{I|L}P{I|L}[AG]PAQ{I|L}H;{I|L}P{I|L}Q[KG]{M(Oxidation (M))|F}T{I|L};{I|L}P{I|L}{[WT]|[RM]}HH{I|L};{I|L}P{I|L}QPA[AG]{I|L}H;{I|L}P{I|L}Q{I|L}N[YR];{I|L}P{I|L}QPA[H{I|L}]Q 8.7858;8.0341;7.8791;7.5948;7.1274;6.9496;6.8677;6.8431;6.8326;6.4867 +;-;-;-;-;-;-;-;-;- + 4476 + 1 1.537 176864.0 1.0 5411 5330 10731 HBL1_DMSO_200M_050219_1,10743 HBL1_DMSO_200M_050219_1,10743,LPIQPAQHI True True LPIQPAQHI 55.859676 508.798693835735 23531096.0 10731.0 nc|ENSG00000116044|Q16236-3|NFE2L2;;nc|ENSG00000116044|Q16236-2|NFE2L2;;ENSG00000116044|ENST00000397062|NFE2L2;;ENST00000462023.1_1_2:178098693-178129304:-|nuORF;;ENST00000477534.1_1_2:178098693-178128139:-|nuORF 5.816115617752075 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10744 55.865 278.0 400180.0 25 0 50084.0 + 39508 VASRAPLL 8 117 413.7609418966068 825.5073308600136 2 413.7608215212822 MULTI CID FTMS 0 0 0 10731 430566.4375 0.4383084439104568 -1 0.0792655944824218 13 Unmodified _VASRAPLL_ ENSG00000235863|ENST00000451237|B3GALT4 39.957323273325 0.2350051964751539 3 YY{I|L}G{I|L}{I|L} 6 6 46.701 0.0 0.0 5.6572 0.0 0.0 85.08998305488437 0.0 85.08998305488437 0.0 1.4844845328051548 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 YY{I|L}G{I|L}{I|L} 5.6572 - 122 1 1.537 90711.3 1.0 5412 5330 10731 HBL1_DMSO_200M_050219_1,10744 HBL1_DMSO_200M_050219_1,10744,VASRAPLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10745 55.874 533.0 323800.0 25 0 40933.0 43171 VYSCPYCTNS 10 140 568.7230938479493 1135.4316347626984 2 568.7232543826103 MULTI CID FTMS 0 0 0 10731 355994.3125 0.8107852386901054 1 -0.1032829284667968 14 Unmodified _VYSCPYCTNS_ ENSG00000102935|ENST00000563137|ZNF423;nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423 10.073929032068715 0.6785112666868882 3 [YV]S 3 7 29.448 0.0 0.0 2.5935 0.0 0.0 0.0 783.2447810852171 783.2447810852171 13.470543743922455 0.0 0.0 0.0 0 0.5 2.0 0.2396518287104437 0.0 + [YV]S 2.5935 + + 375 1 1.537 134933.2 1.0 5413 5330 10731 HBL1_DMSO_200M_050219_1,10745 HBL1_DMSO_200M_050219_1,10745,VYSCPYCTNS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10746 55.886 695.0 526930.0 25 0 38341.0 + 2838 AVAKHFVAL 9 280 319.1956272918402 954.5650524757208 3 319.1955749392509 MULTI CID FTMS 0 0 0 10731 304580.375 1.0 0 0.0 15 Unmodified _AVAKHFVAL_ CON__Q3ZBD7;ENSG00000105220|ENST00000356487|GPI;nc|ENSG00000105220|P06744-2|GPI 24.99096001346401 0.2132109383330889 3 {[VA]|[{I|L}G]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GV[RP]{I|L} 9 6 + 33.992 0.0 0.0 3.561 3.561 81.016 0.0 0.0 0.0 7.568846541166611 9.220449851406515 7.568846541166611 9.873673091479958 0 0.2887254899964357 1.6989700043360187 0.0 0.2742275032520141 {[VA]|[{I|L}G]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GV[RP]{I|L};{[VA]|[{I|L}G]}{[{M(Oxidation (M))|F}H]|[RQ]}KAV[{I|L}A];{[VA]|[{I|L}G]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GV[R{I|L}]P;{[VA]|[{I|L}G]}AKH{M(Oxidation (M))|F}V[{I|L}A];{[{M(Oxidation (M))|F}H]|[RQ]}VAKAV[{I|L}A];{[VA]|[{I|L}G]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}GRVP;{[VA]|[{I|L}G]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{I|L}RVP;[{M(Oxidation (M))|F}V]HAKAV[{I|L}A];{[VA]|[{I|L}G]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GV{[VA]|[{I|L}G]}VP;{[VA]|[{I|L}G]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GV[{I|L}V]GP 3.561;2.5266;2.1344;1.999;1.1144;0.92603;0.74155;0.65796;0.5921;0.56716 -;-;-;+;-;-;-;-;-;- + 1007 + 1 1.537 286915.6 1.0 5414 5330 10731 HBL1_DMSO_200M_050219_1,10746 HBL1_DMSO_200M_050219_1,10746,AVAKHFVAL False True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 10747 55.9 800.0 331660.0 25 0 26044.0 + 43186 VYWVARKPM 9 223 383.8794477079348 1148.6165137240043 3 383.8793517947197 MULTI CID FTMS 0 0 0 10731 207220.703125 0.3086343401268242 -3 0.1749382019042968 16 Unmodified _VYWVARKPM_ ENSG00000137038|ENST00000358227|DMAC1;nc|ENSG00000137038|Q96GE9|DMAC1 45.69961567697781 0.0497987121815769 3 VYWV{M(Oxidation (M))|F}K 6 4 77.555 0.0 0.0 6.752 0.0 0.0 0.0 323.18342004947505 323.18342004947505 55.491521967173 0.0 0.0 0.0 0 0.7491348669726234 1.6989700043360187 0.0 1.4124379954164592 VYWV{M(Oxidation (M))|F}K 6.752 - 1397 + 1 1.537 218179.2 0.9700000286102296 5415 5330 10731 HBL1_DMSO_200M_050219_1,10747 HBL1_DMSO_200M_050219_1,10747,VYWVARKPM True True VYWVARKPM 55.900068 383.87935179472 34610303.0 10731.0 nc|ENSG00000137038|Q96GE9|DMAC1;;ENSG00000137038|ENST00000358227|DMAC1 5.260830958684285 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10748 55.912 695.0 167640.0 25 0 9921.8 + -1 VPSESHPLSTI 11 160 583.4055897822169 2911.9915665780845 5 583.8066894412041 MULTI CID FTMS 0 0 0 10731 197144.46875 0.7532291600563147 1 -0.1032829284667968 17 ENSG00000145734|ENST00000358731|BDP1;nc|ENSG00000145734|A6H8Y1-6|BDP1;nc|ENSG00000145734|A6H8Y1-3|BDP1;ENST00000508917.6_1_5:70751704-70841064:+|nuORF;nc|ENSG00000145734|A6H8Y1-7|BDP1;nc|ENSG00000145734|A6H8Y1-4|BDP1;nc|ENSG00000145734|A6H8Y1-2|BDP1 3 VPTVM{M(Oxidation (M))|F}{I|L}Q 8 -1 34.492 0.0 0.0 1.1845 0.0 0.0 1978.5351318856624 0.0 1978.5351318856624 0.0 15.962254289610613 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.5610312860818771 VPTVM{M(Oxidation (M))|F}{I|L}Q 1.1845 - 5534 + 1 1.537 92255.7 1.0 5416 5330 10731 HBL1_DMSO_200M_050219_1,10748 HBL1_DMSO_200M_050219_1,10748, False False VPSESHPLSTI 55.912149 583.806689441204 2153353.0 10731.0 ENSG00000145734|ENST00000358731|BDP1;;nc|ENSG00000145734|A6H8Y1-6|BDP1;;nc|ENSG00000145734|A6H8Y1-3|BDP1;;ENST00000508917.6_1_5:70751704-70841064:+|nuORF;;nc|ENSG00000145734|A6H8Y1-7|BDP1;;nc|ENSG00000145734|A6H8Y1-4|BDP1;;nc|ENSG00000145734|A6H8Y1-2|BDP1 5.745403130849202 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10749 55.926 800.0 253580.0 25 0 35949.0 + + 17966 LQYLHRNFIIHR 12 195 404.2457396206821 806.4769263081643 2 404.2459289431572 MULTI CID FTMS 0 0 0 10731 191347.328125 0.6125507735872405 -1 0.0792655944824218 18 Unmodified _KRGPVPPG_ ENST00000504473.5_1_16:89753600-89759778:+|nuORF;nc|ENSG00000185324|Q15131-2|CDK10;ENSG00000185324|ENST00000353379|CDK10;ENST00000378277.8_1_16:89756998-89758964:+|nuORF;ENST00000505733.5_1_16:89753118-89759778:+|nuORF;nc|ENSG00000185324|Q15131-3|CDK10;nc|ENSG00000185324|Q15131-4|CDK10;nc|ENSG00000185324|Q15131-5|CDK10;ENST00000561477.1_1_16:89758247-89760641:+|nuORF;nc|ENSG00000185324|Q15131-7|CDK10 10.183394434864962 0.7604730176254005 3 {I|L}{I|L}{I|L}HR 5 -1 57.062 0.0 0.0 7.0754 0.0 0.0 156.0511825897052 0.0 156.0511825897052 0.0 46.68307612850995 0.0 0.0 0 1.16944517631652 0.0 0.0 1.0418727718234408 {I|L}{I|L}{I|L}HR 7.0754 - 91 + 1 1.537 160211.4 0.9399999976158142 5417 5330 10731 HBL1_DMSO_200M_050219_1,10749 HBL1_DMSO_200M_050219_1,10749,KRGPVPPG False False LQYLHRNFIIHR 55.925965 404.245928943157 1990202.0 10731.0 ENST00000504473.5_1_16:89753600-89759778:+|nuORF;;nc|ENSG00000185324|Q15131-2|CDK10;;ENSG00000185324|ENST00000353379|CDK10;;ENST00000378277.8_1_16:89756998-89758964:+|nuORF;;ENST00000505733.5_1_16:89753118-89759778:+|nuORF;;nc|ENSG00000185324|Q15131-3|CDK10;;nc|ENSG00000185324|Q15131-4|CDK10;;nc|ENSG00000185324|Q15131-5|CDK10;;ENST00000561477.1_1_16:89758247-89760641:+|nuORF;;nc|ENSG00000185324|Q15131-7|CDK10 1.8882261713345845 4.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10750 55.938 618.0 66155.0 25 0 2624.7 + -1 VVHMPSRFLCL 11 93 679.8571900472313 1357.6998271612624 2 679.8572265505791 MULTI CID FTMS 0 0 0 10731 149192.9375 0.5703001289161014 -1 0.0792655944824218 19 Carbamidomethyl (C) _VVHMPSRFLC(Carbamidomethyl (C))L_ REV__ENSG00000161996|ENST00000293879|WDR90;REV__ENST00000420061.6_1_16:699416-706047:+|nuORF;REV__ENST00000549648.5_1_16:699416-706047:+|nuORF;REV__ENST00000552943.5_1_16:699416-703842:+|nuORF;REV__nc|ENSG00000161996|Q96KV7-3|WDR90;REV__nc|ENSG00000161996|Q96KV7-5|WDR90 13.90604991867851 0.7458848613461305 3 VV[QA]DG 6 -1 34.593 0.0 0.0 2.5479 0.0 0.0 0.0 785.3941380345624 785.3941380345624 23.879777552075588 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.6203715150305281 0.0 VV[QA]DG 2.5479 - 265 1 1.537 40623.9 1.0 5418 5330 10731 HBL1_DMSO_200M_050219_1,10750 HBL1_DMSO_200M_050219_1,10750,VVHMPSRFLCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10751 55.942 212.0 158180.0 25 0 7320.4 + 43189 VYWVARKPM 9 66 575.315393540163 1148.616234147126 2 575.3155395388603 MULTI CID FTMS 0 0 0 10731 119502.0625 0.4190849114501139 -3 0.1749382019042968 20 Unmodified _VYWVARKPM_ ENSG00000137038|ENST00000358227|DMAC1;nc|ENSG00000137038|Q96GE9|DMAC1 15.248480904072842 0.4239247793462406 3 VYWV 4 5 52.735 0.0 0.0 4.5912 0.0 0.0 0.0 598.3160494440061 598.3160494440061 45.74539712336197 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + VYWV 4.5912 + + 17 + 1 1.537 30392.4 1.0 5419 5330 10731 HBL1_DMSO_200M_050219_1,10751 HBL1_DMSO_200M_050219_1,10751,VYWVARKPM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10753 55.946 6.3 13522000.0 25 0 3320300.0 + 28779 PYFRYPFL 8 99 368.194404519104 1101.5613841575118 3 368.1942321658134 MULTI CID FTMS 0 0 0 10752 8877265.0 0.5027277418372749 20 -1.8392486572265625 1 Unmodified _PYFRYPFL_ REV__ENST00000415383.5_1_10:99230613-99236467:-|nuORF 19.438996006549623 0.6237395211498085 3 {[QN]|[E{I|L}]|[KN]}QVPC(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L} 9 -1 + 37.915 0.0 0.0 3.4419 3.4419 69.187 0.0 0.0 0.0 1.3279505035556198 12.4371942516374 1.3279505035556198 0.796896906561031 0 0.6237125054200234 0.0 0.3054621874040891 0.7742275032520141 {[QN]|[E{I|L}]|[KN]}QVPC(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}QVPC(Carbamidomethyl (C))P{I|L}{M(Oxidation (M))|F};[PG]K{[{M(Oxidation (M))|F}H]|[RQ]}QE{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[AG]VPC(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}QVP[CG]P{M(Oxidation (M))|F}{I|L};[PG]K{[{M(Oxidation (M))|F}H]|[RQ]}QE{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}QVP[CG]P{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[AG]VPC(Carbamidomethyl (C))P{I|L}{M(Oxidation (M))|F};[AG]{[QN]|[E{I|L}]|[KN]}VPC(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L};[AG]{[QN]|[E{I|L}]|[KN]}VPC(Carbamidomethyl (C))P{I|L}{M(Oxidation (M))|F} 3.4419;3.3696;2.6667;2.606;2.606;2.5944;2.5336;2.5336;2.0755;2.0032 -;-;-;-;-;-;-;-;-;- 447 1 1.511 72763.1 1.0 5420 5331 10752 HBL1_DMSO_200M_050219_1,10753 HBL1_DMSO_200M_050219_1,10753,PYFRYPFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10754 55.948 17.0 5579300.0 25 0 1189600.0 + 14644 IILDEAHNV 9 87 512.277397867812 1022.540242802424 2 512.2776367068291 MULTI CID FTMS 0 0 0 10752 4417077.0 0.6702119863131655 2 -0.1499557495117187 2 Unmodified _IILDEAHNV_ ENSG00000116830|ENST00000369466|TTF2 53.832793166522166 0.0319663582346103 3 {I|L}{I|L}{I|L}DEAHNV 9 0 + 88.334 0.0 0.0 8.6387 8.6387 83.744 0.0 0.0 0.0 51.12302362186034 15.54646693705068 15.54646693705068 1.020599913279625 0 0.4247425010840047 2.0 0.7059771852360797 0.9436726795685344 + + {I|L}{I|L}{I|L}DEAHNV;{I|L}{I|L}VEEAHNV;{I|L}{I|L}{I|L}DEAHGGV;{I|L}{I|L}VEEAHGGV 8.6387;8.5389;6.8153;6.6419 +;-;-;- + 691 + 1 1.511 72320.4 1.0 5421 5331 10752 HBL1_DMSO_200M_050219_1,10754 HBL1_DMSO_200M_050219_1,10754,IILDEAHNV True True IILDEAHNV 55.947667 512.277636706829 43302292.0 10752.0 ENSG00000116830|ENST00000369466|TTF2 5.795454343159993 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10755 55.949 8.9 6453300.0 25 0 661450.0 + 4145 DAPHPPLKI 9 82 329.8590105895294 986.5552023687884 3 329.8588744997978 MULTI CID FTMS 0 0 0 10752 7635896.5 0.1765836479475596 -7 0.5137100219726562 3 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 14.838274106304384 0.4350285940865338 3 {I|L} 1 8 10.969 0.0 0.0 1.1119 0.0 0.0 855.4599245140993 0.0 855.4599245140993 0.0 -3.723637474483468 -3.723637474483468 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1119 + + 25 + 1 1.511 49443.6 1.0 5422 5331 10752 HBL1_DMSO_200M_050219_1,10755 HBL1_DMSO_200M_050219_1,10755,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10756 55.95 14.0 2449600.0 25 0 270480.0 + 9931 FPGKHFQEI 9 61 551.7873955743806 1101.5602382155612 2 551.7878295779228 MULTI CID FTMS 0 0 0 10752 5022022.0 0.3811241610865588 20 -1.8392486572265625 4 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 16.565877749689598 0.3882643987948875 3 PQ{M(Oxidation (M))|F}{I|L}E 5 6 27.708 0.0 0.0 2.5154 0.0 0.0 469.2379627912125 0.0 469.2379627912125 0.0 15.233871898888154 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 PQ{M(Oxidation (M))|F}{I|L}E 2.5154 - 50 1 1.511 31777.9 1.0 5423 5331 10752 HBL1_DMSO_200M_050219_1,10756 HBL1_DMSO_200M_050219_1,10756,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10757 55.951 19.0 3536800.0 25 0 268330.0 43517 WWWWIWWQWW 10 66 874.9044782998504 1747.7944036665008 2 874.9060546755791 MULTI CID FTMS 0 0 0 10752 3625493.25 0.8696513598267458 2 -0.1499557495117187 5 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 3 {I|L}NA[QP]QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 14 13 70.94 0.0 0.0 4.0588 0.0 0.0 211.09663588691564 0.0 211.09663588691564 0.0 51.48911668302638 0.0 0.0 0 1.3807196863200843 0.0 0.0 1.6989700043360187 {I|L}NA[QP]QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 4.0588 - 617 1 1.511 51875.5 1.0 5424 5331 10752 HBL1_DMSO_200M_050219_1,10757 HBL1_DMSO_200M_050219_1,10757,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 10758 55.952 20.0 2155700.0 25 0 373600.0 + 6061 DSIIVKEV 8 67 451.7628766350575 901.5112003369152 2 451.7634765505791 MULTI CID FTMS 0 0 0 10752 2903683.25 1.0 0 0.0 6 Unmodified _DSIIVKEV_ ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79827372-79827747:-|nuORF 43.85829265575387 0.1697421968005898 3 {[DS]|[MA]|[CV]|TT}{I|L}{I|L}VKEV 8 0 {[DS]|[MA]|[CV]|TT}{I|L} + + 31.515 5.9421 1.8855 3.4958 3.4958 51.232 0.0 0.0 0.0 0.0 14.972572544702915 0.0 0.0 0 0.7059771852360797 0.0 0.75 0.0 + + {[DS]|[MA]|[CV]|TT}{I|L}{I|L}VKEV 3.4958 + + 84 + 1 1.511 38369.7 1.0 5425 5331 10752 HBL1_DMSO_200M_050219_1,10758 HBL1_DMSO_200M_050219_1,10758,DSIIVKEV False True DSIIVKEV 55.952396 451.763476550579 18737056.0 10752.0 ENSG00000159399|ENST00000290573|HK2;;ENST00000447818.2_1_X:79827372-79827747:-|nuORF 4.96505339940389 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10759 55.954 35.0 1502400.0 25 0 250090.0 + 15400 IPPDQQRLI 9 70 540.3145428572215 1078.6145327812428 2 540.3147460818291 MULTI CID FTMS 0 0 0 10752 2152527.25 0.0413292701686973 20 -1.8392486572265625 7 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 13.042465956692816 0.4836390050082244 3 {I|L}PPD 4 5 52.735 0.0 0.0 4.8892 0.0 0.0 0.0 653.3755587213499 653.3755587213499 42.820263863216056 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}PPD 4.8892 + + 54 + 1 1.511 49768.0 1.0 5426 5331 10752 HBL1_DMSO_200M_050219_1,10759 HBL1_DMSO_200M_050219_1,10759,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10760 55.955 26.0 1424300.0 25 0 97532.0 + 30648 RFPDGTNGL 9 79 488.7463658334003 975.4781787336008 2 488.7462646365166 MULTI CID FTMS 0 0 0 10752 2083158.75 0.8938913213114185 2 -0.1499557495117187 8 Unmodified _RFPDGTNGL_ ENSG00000164442|ENST00000367651|CITED2;nc|ENSG00000164442|Q99967-2|CITED2 24.99096001346401 0.2132109383330889 3 [R{M(Oxidation (M))|F}][DP]GTNG{I|L} 9 0 + 47.681 0.0 0.0 4.888 4.888 82.167 0.0 0.0 0.0 3.925449767853309 37.59250301305293 3.925449767853309 7.781512503836431 0 0.8807196863200843 0.0 0.0 0.0 + + [R{M(Oxidation (M))|F}][DP]GTNG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTNG{I|L};[R{M(Oxidation (M))|F}][DP]GTGGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTGGG{I|L};[VP]YY[HQ]G{I|L} 4.888;4.0903;3.944;3.1463;3.0127 +;-;-;-;- + 80 1 1.511 36277.8 1.0 5427 5331 10752 HBL1_DMSO_200M_050219_1,10760 HBL1_DMSO_200M_050219_1,10760,RFPDGTNGL False True RFPDGTNGL 55.954752 488.746264636517 72907506.0 10752.0 ENSG00000164442|ENST00000367651|CITED2;;nc|ENSG00000164442|Q99967-2|CITED2 6.517984072367351 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10761 55.959 214.0 660400.0 25 0 164760.0 -1 0 40 1129.4642236933064 3385.370841680119 3 1130.133959949017 MULTI CID FTMS 0 0 0 10752 1667724.75 1.0 0 0.0 9 3 GYW 3 -1 11.427 0.0 0.0 0.33753 0.0 0.0 1944.6751627082103 1031.516600860615 2976.191763568825 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYW 0.33753 - 15 + 1 1.511 124819.9 1.0 5428 5331 10752 HBL1_DMSO_200M_050219_1,10761 HBL1_DMSO_200M_050219_1,10761, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10762 55.96 33.0 1013200.0 25 0 130810.0 + 24835 MPKPDPTVI 9 63 499.2726053036181 996.5306576740362 2 499.2726623415947 MULTI CID FTMS 0 0 0 10752 1604070.625 0.5048772091339723 -2 0.1825485229492187 10 Unmodified _MPKPDPTVI_ ENSG00000152689|ENST00000403687|RASGRP3;nc|ENSG00000152689|Q8IV61-2|RASGRP3 14.838274106304384 0.4350285940865338 3 V{I|L} 2 7 22.206 0.0 0.0 2.2284 0.0 0.0 766.3667915625113 0.0 766.3667915625113 0.0 14.13425655227236 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + V{I|L} 2.2284 + + 35 + 1 1.511 32436.9 1.0 5429 5331 10752 HBL1_DMSO_200M_050219_1,10762 HBL1_DMSO_200M_050219_1,10762,MPKPDPTVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10763 55.961 53.0 2023600.0 25 0 378870.0 + 22644 LPYQIKKI 8 94 334.88313194599925 1001.6275664381978 3 334.8829528689384 MULTI CID FTMS 0 0 0 10752 1585755.625 0.1492250043475773 -2 0.1825485229492187 11 Unmodified _LPYQIKKI_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 42.09456458481378 0.1992492688217789 3 {I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}KK{I|L} 8 2 + 63.41 0.0 0.0 6.3307 6.3307 79.389 0.0 0.0 0.0 16.40978057358332 1.5490195998574308 1.5490195998574308 1.5490195998574308 0 0.4247425010840047 0.0 0.0 0.6747425010840047 {I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}KK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}K{I|L}K;{I|L}PYQ{I|L}KK{I|L};{I|L}PYQ{I|L}K{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}[AG]{I|L}KK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[AG]{I|L}K{I|L}K;{I|L}PY[AG]{I|L}KK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}QKK{I|L};{I|L}PY[AG]{I|L}K{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}QK{I|L}K 6.3307;6.176;6.0302;5.8755;5.406;5.2513;5.1054;5.005;4.9508;4.8504 -;-;+;-;-;-;-;-;-;- + 524 + 1 1.511 88298.2 1.0 5430 5331 10752 HBL1_DMSO_200M_050219_1,10763 HBL1_DMSO_200M_050219_1,10763,LPYQIKKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10764 55.963 58.0 735490.0 25 0 54620.0 -1 LPEICTQCP 9 95 530.7433095394466 1059.4720661456931 2 530.7434570193291 MULTI CID FTMS 0 0 0 10752 1065861.625 0.6773861100024658 2 -0.1499557495117187 12 Carbamidomethyl (C) _LPEIC(Carbamidomethyl (C))TQCP_ ENSG00000138085|ENST00000380171|ATRAID;ENST00000484646.1_1_2:27435071-27436167:+|nuORF;nc|ENSG00000138085|Q6UW56-3|ATRAID 16.942295170755138 0.3780752226737986 3 [{I|L}P]EPGN{I|L} 7 -1 51.247 0.0 0.0 4.837 0.0 0.0 0.0 336.0668286791494 336.0668286791494 37.267441563785866 0.0 0.0 0.0 0 1.3807196863200843 2.0 0.0 0.0 [{I|L}P]EPGN{I|L} 4.837 - 255 1 1.511 39822.5 1.0 5431 5331 10752 HBL1_DMSO_200M_050219_1,10764 HBL1_DMSO_200M_050219_1,10764,LPEICTQCP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10765 55.969 347.0 356620.0 25 0 41517.0 -1 0 169 304.69633415816725 607.3781153831345 2 304.6962463259697 MULTI CID FTMS 0 0 0 10752 675701.6875 1.0 0 0.0 13 3 S 1 -1 1.9897 0.0 0.0 0.32759 0.0 0.0 410.2357641641876 107.08728967838124 517.3230538425689 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.32759 - 24 + 1 1.511 104956.6 1.0 5432 5331 10752 HBL1_DMSO_200M_050219_1,10765 HBL1_DMSO_200M_050219_1,10765, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10766 55.975 315.0 409700.0 25 0 84368.0 + 17265 KLPEKWESV 9 121 558.3083439989884 1114.6021350647768 2 558.3082763552666 MULTI CID FTMS 0 0 0 10752 637700.5 0.2178342283505202 5 -0.3962364196777344 14 Unmodified _KLPEKWESV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 40.23920728925047 0.0741434193262949 3 K{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WK 7 6 55.319 0.0 0.0 4.9631 0.0 0.0 0.0 223.0730074518188 223.0730074518188 27.471035492847413 0.0 0.0 0.0 0 1.0 0.8860566476931632 0.9247425010840048 0.0 K{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WK 4.9631 - 873 + 1 1.511 101364.3 1.0 5433 5331 10752 HBL1_DMSO_200M_050219_1,10766 HBL1_DMSO_200M_050219_1,10766,KLPEKWESV True True KLPEKWESV 55.974869 558.308276355267 78075414.0 10752.0 ENSG00000171490|ENST00000571133|RSL1D1;;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;;nc|ENSG00000171490|O76021-2|RSL1D1;;ENST00000574823.5_1_16:11935494-11935832:-|nuORF 3.8554471333821616 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10767 55.981 357.0 308570.0 25 0 31195.0 + 4175 DAPIGPHL 8 107 410.22171120493886 818.4288694766777 2 410.2214843630791 MULTI CID FTMS 0 0 0 10752 602415.125 0.0787819863965861 5 -0.3962364196777344 15 Unmodified _DAPIGPHL_ ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A 56.04830969593885 0.114297258605095 3 {[DA]|[EG]}P{I|L}GPH{I|L} 8 0 + 61.547 0.0 0.0 7.5202 7.5202 88.466 0.0 0.0 0.0 39.66312853471372 10.635270773654604 10.635270773654604 5.6246936830415 0 0.6421590589602533 2.0 0.0 0.0 + + {[DA]|[EG]}P{I|L}GPH{I|L};{[DA]|[EG]}{I|L}PGPH{I|L} 7.5202;6.8329 +;- + 80 + 1 1.511 88450.9 1.0 5434 5331 10752 HBL1_DMSO_200M_050219_1,10767 HBL1_DMSO_200M_050219_1,10767,DAPIGPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10768 55.984 127.0 513690.0 25 0 64065.0 + 21624 LPLADRAL 8 91 434.7657149263287 867.5168769194573 2 434.7661620974541 MULTI CID FTMS 0 0 0 10752 481254.15625 0.5635454592826553 2 -0.1499557495117187 16 Unmodified _LPLADRAL_ REV__ENSG00000128610|ENST00000442488|FEZF1;REV__nc|ENSG00000128610|A0PJY2-2|FEZF1;REV__nc|ENSG00000128610|A0PJY2-3|FEZF1 18.13498045792455 0.6430038125133779 3 {I|L}P 2 -1 36.186 0.0 0.0 4.1712 0.0 0.0 0.0 654.3572481744749 654.3572481744749 22.69077524932108 0.0 0.0 0.0 0 0.2742275032520141 1.3979400086720375 0.0 0.0 {I|L}P 4.1712 + + 36 + 1 1.511 54759.5 1.0 5435 5331 10752 HBL1_DMSO_200M_050219_1,10768 HBL1_DMSO_200M_050219_1,10768,LPLADRAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10769 55.992 448.0 167100.0 25 0 14708.0 + 45175 YQLEQKDVNSL 11 104 668.8413886711996 0 668.8415405154228 PEAK CID FTMS 0 0 0 10752 320822.375 0.9960740405829948 2 -0.1499557495117187 17 Unmodified _YQLEQKDVNSL_ ENSG00000123545|ENST00000316149|NDUFAF4 53.31671820480216 0.0324464488377707 3 {I|L}EQ 3 8 37.862 0.0 0.0 2.8347 0.0 0.0 291.12281426433384 671.3400362604124 962.4628505247464 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 1.174742501084005 + {I|L}EQ 2.8347 + + 151 + 1 1.511 61734.5 1.0 5436 5331 10752 HBL1_DMSO_200M_050219_1,10769 HBL1_DMSO_200M_050219_1,10769,YQLEQKDVNSL True True YQLEQKDVNSL 55.991871 668.841540515423 2684719.0 10752.0 ENSG00000123545|ENST00000316149|NDUFAF4 6.985852559407552 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10770 56.001 514.0 272240.0 25 0 16889.0 -1 0 112 881.9127604281156 1761.810967923031 2 881.9129516482353 MULTI CID FTMS 0 0 0 10752 296658.1875 0.2209429250874084 -9 0.6769638061523438 18 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAQR[DG]{M(Oxidation (M))|F}{I|L}Q 16 -1 + 86.493 0.0 0.0 4.9093 4.9093 75.338 0.0 0.0 0.0 19.78351129892729 12.50508444608478 12.50508444608478 1.9382002601611248 0 1.2302046884880935 0.0 0.3054621874040891 1.7416440611282624 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAQR[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQR[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAQ[VG][DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEA[AG]R[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}GGEAQR[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ[VG][DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEAQR[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[AG]R[DG]{M(Oxidation (M))|F}{I|L}Q;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}GRQAEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GWAQ[VG][DG]{M(Oxidation (M))|F}{I|L}Q 4.9093;4.7993;4.3977;4.3977;4.3977;4.2867;4.2867;4.2867;4.0996;4.0159 -;-;-;-;-;-;-;-;-;- 6419 + 1 1.511 95839.5 1.0 5437 5331 10752 HBL1_DMSO_200M_050219_1,10770 HBL1_DMSO_200M_050219_1,10770, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10771 56.01 455.0 282940.0 25 0 15705.0 22198 LPQHSPPLQ 9 164 508.7786536302368 1015.5427543272737 2 509.7761108279228 MULTI CID FTMS 0 0 0 10752 308329.0 0.5528589729207737 20 -1.8392486572265625 19 Unmodified _LPQHSPPLQ_ ENSG00000180264|ENST00000696331|ADGRD2 18.1463463914782 0.3454829746528889 3 [H{I|L}][WH][KA]PQ 8 5 + 19.174 0.0 0.0 1.888 1.888 69.776 0.0 0.0 0.0 0.2367654799552561 -0.1133725577894573 -0.1133725577894573 2.7300127206373794 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}][WH][KA]PQ;[H{I|L}][WK]Y[RN];[{I|L}P]Q[PS]H{I|L}PQ;[{I|L}P][MT][KT]TPQ;[TP]P{M(Oxidation (M))|F}[KT]TPQ;[{I|L}P]Q[{M(Oxidation (M))|F}V]{[RE]|[WV]}Q;[AG]{I|L}SN[KT]TPQ;[AG]{I|L}P[PS]H{I|L}PQ;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TP[KT]TPQ;[{I|L}A]GSN[KT]TPQ 1.888;1.6192;1.5592;1.5292;1.3921;1.349;0.79326;0.68198;0.56563;0.50455 -;-;-;-;-;-;-;-;-;- 1850 1 1.511 104695.8 1.0 5438 5331 10752 HBL1_DMSO_200M_050219_1,10771 HBL1_DMSO_200M_050219_1,10771,LPQHSPPLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10772 56.014 178.0 201350.0 25 0 20950.0 + 13713 HQPREQPDLSV 11 64 653.3306634323188 1304.6467739314376 2 653.3322021365166 MULTI CID FTMS 0 0 0 10752 168349.25 0.1838893354838159 -2 0.1825485229492187 20 Unmodified _HQPREQPDLSV_ REV__ENSG00000146950|ENST00000380913|SHROOM2 23.78978130925829 0.5336113198261219 3 [K{I|L}]{I|L}DD{[DS]|[MA]|[CV]|TT}SN{I|L}W 11 -1 + 68.408 0.0 0.0 5.2434 5.2434 84.368 0.0 0.0 0.0 5.227865392785006 52.923725088190864 5.227865392785006 9.128498242810991 0 0.8494850021680094 0.0 0.3807196863200844 0.7134679910804405 [K{I|L}]{I|L}DD{[DS]|[MA]|[CV]|TT}SN{I|L}W;[K{I|L}]{I|L}DD{[DS]|[MA]|[CV]|TT}SGG{I|L}W;[K{I|L}]{I|L}DD{[C(Carbamidomethyl (C))E]|[WC]}N{I|L}SV;[K{I|L}]{I|L}DD{[C(Carbamidomethyl (C))E]|[WC]}GG{I|L}SV;[K{I|L}]{I|L}DD{[DS]|[MA]|[CV]|TT}[WK]W;[K{I|L}]{I|L}DD{[DS]|[MA]|[CV]|TT}[WQ]W 5.2434;4.5437;4.2471;3.5475;2.6477;2.6477 -;-;-;-;-;- 111 1 1.511 34355.6 1.0 5439 5331 10752 HBL1_DMSO_200M_050219_1,10772 HBL1_DMSO_200M_050219_1,10772,HQPREQPDLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10774 56.025 513.0 264050.0 25 0 50368.0 41585 VPPGQALA 8 142 376.7174704608166 751.4203879884333 2 376.7173339724541 MULTI CID FTMS 0 0 0 10773 45683.71875 0.1210631148788614 3 -0.2711868286132812 1 Unmodified _VPPGQALA_ ENST00000448973.6_1_16:685482-685995:-|nuORF 0.7936320650641473 0.8195151834710337 3 [KT]{M(Oxidation (M))|F} 3 8 10.458 0.0 0.0 1.3917 0.0 0.0 0.0 372.2215030041736 372.2215030041736 9.973024840566469 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [KT]{M(Oxidation (M))|F} 1.3917 - 12 + 1 1.511 110671.8 1.0 5440 5332 10773 HBL1_DMSO_200M_050219_1,10774 HBL1_DMSO_200M_050219_1,10774,VPPGQALA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10775 56.029 259.0 368270.0 25 0 28118.0 -1 0 148 318.16504664891704 634.3155403646341 2 318.1647521853447 MULTI CID FTMS 0 0 0 10773 953187.6875 1.0 0 0.0 2 3 NW 2 -1 17.959 0.0 0.0 2.8312 0.0 0.0 316.1747760597497 0.0 316.1747760597497 0.0 7.362868134844707 0.0 0.0 0 0.0 0.0 0.0 0.0 NW 2.8312 - 30 + 1 1.511 78700.7 1.0 5441 5332 10773 HBL1_DMSO_200M_050219_1,10775 HBL1_DMSO_200M_050219_1,10775, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10776 56.031 18.0 2798000.0 25 0 169950.0 + -1 IPCCGKRN 8 88 474.2302535942672 946.4459542553344 2 474.2297851443291 MULTI CID FTMS 0 0 0 10773 929406.375 0.637113728030601 -4 0.343963623046875 3 Carbamidomethyl (C) _IPC(Carbamidomethyl (C))CGKRN_ REV__ENSG00000164619|ENST00000649409|BMPER 14.581692164780916 0.6954967302934248 3 {I|L} 1 -1 13.099 0.0 0.0 1.384 0.0 0.0 815.3509358000593 0.0 815.3509358000593 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.384 + + 80 + 1 1.511 45378.2 1.0 5442 5332 10773 HBL1_DMSO_200M_050219_1,10776 HBL1_DMSO_200M_050219_1,10776,IPCCGKRN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10777 56.032 23.0 1642200.0 25 0 109610.0 23314 LTAFTEHL 8 72 466.24663195489904 930.478710976598 2 466.2468749880791 MULTI CID FTMS 0 0 0 10773 790188.375 0.8141649737381697 -3 0.2539520263671875 4 Unmodified _LTAFTEHL_ ENSG00000186513|ENST00000641291|OR9Q2 8.593279151180031 0.7721714526254883 3 [QP]{I|L}TA 5 7 20.713 0.0 0.0 2.2261 0.0 0.0 0.0 417.18134485416255 417.18134485416255 5.435750878594501 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [QP]{I|L}TA 2.2261 - 70 + 1 1.511 32929.4 1.0 5443 5332 10773 HBL1_DMSO_200M_050219_1,10777 HBL1_DMSO_200M_050219_1,10777,LTAFTEHL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10778 56.035 184.0 1239800.0 25 0 195150.0 -1 0 132 401.2531574295558 800.4917619259116 2 401.2522765994072 MULTI CID FTMS 0 0 0 10773 468484.59375 0.1753712443092546 -6 0.3906822204589844 5 3 PHPP{I|L}K{I|L} 7 -1 + 68.388 0.0 0.0 8.5433 8.5433 90.447 0.0 0.0 0.0 31.54901959985743 5.975498759591474 5.975498759591474 5.975498759591474 0 1.6535984316004215 1.5228787452803376 0.0 0.1989700043360188 PHPP{I|L}K{I|L};PHPP{I|L}{I|L}K 8.5433;7.7968 -;- 160 + 1 1.511 178952.8 1.0 5444 5332 10773 HBL1_DMSO_200M_050219_1,10778 HBL1_DMSO_200M_050219_1,10778, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10779 56.045 551.0 363020.0 25 0 34133.0 + 4258 DAPSVSTF 8 104 823.3838310160611 822.376554549461 1 823.3829833865166 MULTI CID FTMS 0 0 0 10773 203115.765625 0.3780569328440317 1 -0.07855224609375 6 Unmodified _DAPSVSTF_ ENSG00000213020|ENST00000652185|ZNF611;nc|ENSG00000213020|Q8N823-2|ZNF611 77.98433622928108 0.1005472218284828 3 [PS]VSADT{M(Oxidation (M))|F} 8 4 + 62.461 0.0 0.0 7.5952 7.5952 90.942 0.0 0.0 0.0 12.50190170283406 12.519024321665093 12.50190170283406 8.322646798160555 0 0.4531198197908842 0.958607314841775 2.4802046884880937 0.0 [PS]VSADT{M(Oxidation (M))|F};[PS]ADVST{M(Oxidation (M))|F};[PS]VSTEG{M(Oxidation (M))|F};[PS]V{[DA]|[EG]}ST{M(Oxidation (M))|F};[PS]VSASE{M(Oxidation (M))|F};{[DA]|[EG]}PSVST{M(Oxidation (M))|F};[PS]VSTGE{M(Oxidation (M))|F};[VS]PSADT{M(Oxidation (M))|F};[VG]VDADT{M(Oxidation (M))|F};[PS][DG]{I|L}ST{M(Oxidation (M))|F} 7.5952;6.5832;6.3996;6.3475;6.1188;6.075;6.0049;5.4105;5.0454;4.9452 -;-;-;-;-;+;-;-;-;- + 1485 1 1.511 137545.8 1.0 5445 5332 10773 HBL1_DMSO_200M_050219_1,10779 HBL1_DMSO_200M_050219_1,10779,DAPSVSTF True True DAPSVSTF 56.045102 823.382983386517 4280125.5 10773.0 ENSG00000213020|ENST00000652185|ZNF611;;nc|ENSG00000213020|Q8N823-2|ZNF611 3.474013447761536 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10780 56.048 170.0 417000.0 25 0 17706.0 + 4959 DGPRVFRV 8 120 315.84712001612127 944.519530648564 3 315.8470947146416 MULTI CID FTMS 0 0 0 10773 175648.609375 0.0075616048317078 12 -1.0908546447753906 7 Unmodified _DGPRVFRV_ ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF;nc|ENSG00000179115|Q9Y285-2|FARSA 11.640296217721598 0.738950129755968 3 DGV 3 5 39.157 0.0 0.0 4.1457 0.0 0.0 0.0 670.3819019108405 670.3819019108405 24.953651349222213 0.0 0.0 0.0 0 0.1989700043360188 1.0969100130080565 0.0 0.0 DGV 4.1457 - 80 + 1 1.511 63174.2 1.0 5446 5332 10773 HBL1_DMSO_200M_050219_1,10780 HBL1_DMSO_200M_050219_1,10780,DGPRVFRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10781 56.058 563.0 233530.0 25 0 20194.0 + 11020 GATTSHPPSV 10 145 477.2379692291998 0 477.2387573122978 PEAK CID FTMS 0 0 0 10773 155913.015625 1.0 0 0.0 8 Unmodified _GATTSHPPSV_ ENST00000478275.1_1_1:212860135-212870482:-|nuORF 14.838274106304384 0.3381107837965078 3 PE 2 9 10.614 0.0 0.0 1.1143 0.0 0.0 554.2437474410184 169.09876428775627 723.3425117287746 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 PE 1.1143 - 407 + 1 1.511 104817.4 1.0 5447 5332 10773 HBL1_DMSO_200M_050219_1,10781 HBL1_DMSO_200M_050219_1,10781,GATTSHPPSV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10782 56.071 709.0 354030.0 25 0 23754.0 + 43182 VYVKHSISF 9 268 360.534201033298 1078.580773700094 3 360.5340759158134 MULTI CID FTMS 0 0 0 10773 121851.3671875 0.5524844020406781 -1 0.0714035034179687 9 Unmodified _VYVKHSISF_ ENSG00000185009|ENST00000355264|AP3M1 24.020572477871973 0.2255576514309169 3 [YV]V 3 6 27.434 0.0 0.0 2.5435 0.0 0.0 0.0 714.3571278358405 714.3571278358405 4.183247455597279 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 + [YV]V 2.5435 + + 554 + 1 1.511 204915.2 1.0 5448 5332 10773 HBL1_DMSO_200M_050219_1,10782 HBL1_DMSO_200M_050219_1,10782,VYVKHSISF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10783 56.082 645.0 144950.0 25 0 21730.0 -1 0 77 869.7039875731764 0 869.7018310427666 PEAK CID FTMS 0 0 0 10773 108314.484375 0.7438826378161671 1 -0.07855224609375 10 3 TSA 3 -1 21.51 0.0 0.0 1.2381 0.0 0.0 1000.0500517070964 475.2030428522094 1475.253094559306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 TSA 1.2381 - 178 + 1 1.511 70347.9 1.0 5449 5332 10773 HBL1_DMSO_200M_050219_1,10783 HBL1_DMSO_200M_050219_1,10783, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10784 56.092 590.0 48769.0 25 0 5525.3 4699 DDEITQDENTV 11 70 639.7706176638603 0 639.7706176638603 PEAK CID FTMS 0 0 0 -1 0 11 Unmodified _DDEITQDENTV_ ENSG00000181072|ENST00000680005|CHRM2 2.9952420565917617 0.4761840153648598 3 H 1 11 0.71334 0.0 0.0 0.055837 0.0 0.0 1052.415443846472 85.03038202457265 1137.4458258710447 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.055837 - 1 + 1 1.511 30722.2 1.0 5450 5332 10773 HBL1_DMSO_200M_050219_1,10784 HBL1_DMSO_200M_050219_1,10784,DDEITQDENTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10786 56.096 5.7 21251000.0 25 0 3607400.0 + 36141 SVVDHFNRI 9 84 362.86128109174535 1085.5620138754362 3 362.8612548708916 MULTI CID FTMS 0 0 0 10785 12401489.0 0.8665816027948093 2 -0.1926345825195312 1 Unmodified _SVVDHFNRI_ ENSG00000103035|ENST00000219313|PSMD7;ENST00000422197.2_1_1:51837944-51838202:+|nuORF;ENST00000566015.1_1_16:74330767-74334139:+|nuORF 43.85829265575387 0.0542763391141878 3 [VS]VDH{M(Oxidation (M))|F}{I|L}[RN] 9 2 + 70.379 0.0 0.0 6.4832 6.4832 82.233 0.0 0.0 0.0 37.830918867322296 7.147642715192504 7.147642715192504 3.0102999566398125 0 0.4247425010840047 2.0 0.7742275032520141 0.3494850021680094 [VS]VDH{M(Oxidation (M))|F}{I|L}[RN];[VS]VDH{I|L}{M(Oxidation (M))|F}[RN];[VS]VD{I|L}H{M(Oxidation (M))|F}[RN];[VS]V{I|L}DH{M(Oxidation (M))|F}[RN];[VS]{I|L}VDH{M(Oxidation (M))|F}[RN];[VS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QP]NVW;[HD]{M(Oxidation (M))|F}[RN]{I|L}V[VS];[HD]{M(Oxidation (M))|F}[R{I|L}]NV[VS];[HD]{M(Oxidation (M))|F}[RN]V{I|L}[VS];[HD]{M(Oxidation (M))|F}[R{I|L}]GGV[VS] 6.4832;6.2059;5.9286;5.6801;5.4315;2.8962;2.1761;2.061;1.9916;1.2128 -;-;-;-;-;-;-;-;-;- 302 + 1 1.51 105420.9 1.0 5451 5333 10785 HBL1_DMSO_200M_050219_1,10786 HBL1_DMSO_200M_050219_1,10786,SVVDHFNRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10787 56.098 4.4 28366000.0 25 0 4570000.0 + 29707 QPITPGPSI 9 105 455.2557361064309 908.4969192796618 2 455.2559387087822 MULTI CID FTMS 0 0 0 10785 21939832.0 1.0 0 0.0 2 Unmodified _QPITPGPSI_ ENSG00000004487|ENST00000400181|KDM1A;ENST00000602503.1_1_1:23408727-23408946:+|nuORF;nc|ENSG00000004487|O60341|KDM1A 99.79894945604345 0.0109923542231827 3 [{I|L}T]TGPT 6 5 45.19 0.0 0.0 4.9742 0.0 0.0 0.0 335.1710275162431 335.1710275162431 11.057985110184717 0.0 0.0 0.0 0 1.0114393726401687 1.6989700043360187 1.5356668758921828 0.0 [{I|L}T]TGPT 4.9742 - 735 1 1.51 96811.7 1.0 5452 5333 10785 HBL1_DMSO_200M_050219_1,10787 HBL1_DMSO_200M_050219_1,10787,QPITPGPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10788 56.099 41.0 1342500.0 25 0 127870.0 + 22044 LPPPPPPHL 9 69 482.7845332676538 963.5545136021076 2 482.7846557497978 MULTI CID FTMS 0 0 0 10785 2470150.0 0.9743997918776875 -7 0.4692344665527344 3 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 45.7499826716795 0.0496882803020414 3 {I|L}PPPPPP[H{I|L}] 9 0 + 78.862 0.0 0.0 8.1845 8.1845 96.551 0.0 0.0 0.0 67.7524439246897 5.642492736872597 5.642492736872597 22.21848749616356 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPPPPP[H{I|L}];{I|L}PPP[YK][H{I|L}];{I|L}PP[YK]P[H{I|L}];{I|L}P[YK]PP[H{I|L}];{I|L}PPP[W{I|L}]{[QN]|[E{I|L}]|[KN]};{I|L}[YK]PPP[H{I|L}];{I|L}[YK][YK][H{I|L}];{I|L}[YK][W{I|L}]{[QN]|[E{I|L}]|[KN]} 8.1845;5.8786;5.8786;5.8786;5.5662;3.3621;1.0633;0.75091 +;-;-;-;-;-;-;- + 143 + 1 1.51 48507.1 1.0 5453 5333 10785 HBL1_DMSO_200M_050219_1,10788 HBL1_DMSO_200M_050219_1,10788,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10789 56.1 27.0 1915300.0 25 0 323250.0 + 25768 NIVHDLPAA 9 79 475.2571947467793 948.4998365603584 2 475.2587463259697 MULTI CID FTMS 0 0 0 10785 1647250.125 0.4737257307249398 -4 0.3325042724609375 4 Unmodified _NIVHDLPAA_ ENSG00000183527|ENST00000331573|PSMG1;ENST00000411828.5_1_21:40547518-40555177:-|nuORF;nc|ENSG00000183527|O95456-2|PSMG1 14.838274106304384 0.4350285940865338 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}N{I|L}[W{M(Oxidation (M))|F}] 7 8 + 33.996 0.0 0.0 3.5842 3.5842 80.856 0.0 0.0 0.0 18.309932190414244 4.074769491456962 4.074769491456962 9.33053210369387 0 0.5 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}N{I|L}[W{M(Oxidation (M))|F}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GG{I|L}[W{M(Oxidation (M))|F}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}W[R{M(Oxidation (M))|F}]A;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W{I|L}[R{M(Oxidation (M))|F}]A;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[DA]|[EG]}[R{M(Oxidation (M))|F}]A;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[DA]|[EG]}{I|L}[R{M(Oxidation (M))|F}]A;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[KG]{[{M(Oxidation (M))|F}D]|MM}{I|L};{[RE]|[WV]}RR[W{M(Oxidation (M))|F}] 3.5842;2.6005;2.3443;2.0269;1.3606;1.0432;0.9597;0.41386 -;-;-;-;-;-;-;- 226 + 1 1.51 45614.2 1.0 5454 5333 10785 HBL1_DMSO_200M_050219_1,10789 HBL1_DMSO_200M_050219_1,10789,NIVHDLPAA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10790 56.101 51.0 1430100.0 25 0 218070.0 + 44625 YPFKPPKV 8 82 325.86048683472575 974.5596311043772 3 325.8602783083916 MULTI CID FTMS 0 0 0 10785 1641640.125 0.0212833897704489 -34 3.026996612548828 5 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 21.74664581756881 0.5868176546531598 3 YP{M(Oxidation (M))|F}KPP{[QV]|[N{I|L}]|[RA]|[KV]} 8 0 + 43.031 0.0 0.0 4.4154 4.4154 71.917 0.0 0.0 0.0 27.1669877129645 0.8715017571890016 0.8715017571890016 0.8715017571890016 0 0.0 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPP{[QV]|[N{I|L}]|[RA]|[KV]};YP{M(Oxidation (M))|F}KPV[KP];YP{M(Oxidation (M))|F}KVP[KP];[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[Y{I|L}]PP{[QV]|[N{I|L}]|[RA]|[KV]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[Y{I|L}]PV[KP];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[Y{I|L}]VP[KP] 4.4154;4.326;4.1978;1.0388;0.2403;0.15087;0.02267 +;-;-;-;-;-;- + 111 + 1 1.51 63780.6 1.0 5455 5333 10785 HBL1_DMSO_200M_050219_1,10790 HBL1_DMSO_200M_050219_1,10790,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10791 56.103 68.0 939890.0 25 0 88665.0 + 30176 QVTPEFRTV 9 79 538.789498991656 1075.564445050112 2 538.7910034060478 MULTI CID FTMS 0 0 0 10785 1415421.0 1.0 0 0.0 6 Unmodified _QVTPEFRTV_ ENSG00000135925|ENST00000258411|WNT10A 55.50274090549119 0.0285720310785888 3 {[QV]|[N{I|L}]|[RA]|[KV]}TPE{M(Oxidation (M))|F}R{[TV]|[{I|L}S]} 9 0 + 61.436 0.0 0.0 5.7119 5.7119 86.791 0.0 0.0 0.0 54.44591861666268 0.2904561281719964 0.2904561281719964 9.208187539523747 0 0.7059771852360797 2.0 0.805462187404089 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}TPE{M(Oxidation (M))|F}R{[TV]|[{I|L}S]};{[QV]|[N{I|L}]|[RA]|[KV]}TPE{M(Oxidation (M))|F}[VG]{[TV]|[{I|L}S]};[RD][WP]{M(Oxidation (M))|F}R{[TV]|[{I|L}S]} 5.7119;4.8558;0.10157 +;-;- + 151 + 1 1.51 54876.6 1.0 5456 5333 10785 HBL1_DMSO_200M_050219_1,10791 HBL1_DMSO_200M_050219_1,10791,QVTPEFRTV True True QVTPEFRTV 56.102943 538.791003406048 16118777.0 10785.0 ENSG00000135925|ENST00000258411|WNT10A 4.845508893330892 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10792 56.105 91.0 603730.0 25 0 43021.0 + 3269 AYHELAQVY 9 81 547.269151839691 1092.5237507461818 2 547.2698242068291 MULTI CID FTMS 0 0 0 10785 903495.6875 0.0286379748236925 4 -0.3176002502441406 7 Unmodified _AYHELAQVY_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 26.88365393820708 0.1891292719743517 3 {[YC]|[HE]}YA{I|L}AQVY 9 3 + 42.285 0.0 0.0 3.8704 3.8704 76.17 0.0 0.0 0.0 4.762036441594191 16.765997036641593 4.762036441594191 4.771212547196619 0 0.8182503180159344 0.0 0.0 0.0 {[YC]|[HE]}YA{I|L}AQVY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[YC]|[HE]}{I|L}AQVY;{[YC]|[HE]}{I|L}AYAQVY;[YT][KS][W{M(Oxidation (M))|F}]VY;[YT][KS]{I|L}A[{M(Oxidation (M))|F}T]Y;{[YC]|[HE]}YA{I|L}A[AG]VY;[YT][C(Carbamidomethyl (C))K]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[YC]|[HE]}{I|L}A[AG]VY;{[YC]|[HE]}{I|L}AYA[AG]VY;[YT][KS]{I|L}E[HC]{I|L} 3.8704;3.4337;3.3193;3.2617;3.1215;3.0276;2.686;2.5909;2.4765;2.3075 -;+;-;-;-;-;-;-;-;- + 209 1 1.51 49450.3 1.0 5457 5333 10785 HBL1_DMSO_200M_050219_1,10792 HBL1_DMSO_200M_050219_1,10792,AYHELAQVY False True AYHELAQVY 56.104956 547.269824206829 528371664.0 10785.0 nc|ENSG00000141030|Q9UNS2-2|COPS3;;ENSG00000141030|ENST00000268717|COPS3 8.046612421671549 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10793 56.108 129.0 407480.0 25 0 70086.0 -1 0 65 668.2911530416982 667.2838765750981 1 668.2919799685478 MULTI CID FTMS 0 0 0 10785 629553.25 0.568660385134334 -1 0.07855224609375 8 3 {[QD]|[EN]|[WG]|[KD]|[RS]}Q 3 -1 8.9524 0.0 0.0 1.3416 0.0 0.0 0.0 293.11924158267817 293.11924158267817 3.4678748622465623 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}Q 1.3416 - 30 + 1 1.51 46268.5 1.0 5458 5333 10785 HBL1_DMSO_200M_050219_1,10793 HBL1_DMSO_200M_050219_1,10793, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10794 56.111 182.0 347180.0 25 0 50222.0 + 44840 YPNYPNPAV 9 87 517.7508226068903 1033.4870922805806 2 517.7509033083916 MULTI CID FTMS 0 0 0 10785 555405.875 1.0 0 0.0 9 Unmodified _YPNYPNPAV_ ENSG00000129173|ENST00000250024|E2F8 23.1484247019978 0.2366544122328345 3 [PA][MT]HPN 7 7 19.825 0.0 0.0 1.9182 0.0 0.0 0.0 282.1441512778618 282.1441512778618 5.220483427765256 0.0 0.0 0.0 0 0.5 0.958607314841775 0.0 0.3054621874040891 [PA][MT]HPN 1.9182 - 152 1 1.51 62814.7 1.0 5459 5333 10785 HBL1_DMSO_200M_050219_1,10794 HBL1_DMSO_200M_050219_1,10794,YPNYPNPAV False True YPNYPNPAV 56.111137 517.750903308392 15456244.0 10785.0 ENSG00000129173|ENST00000250024|E2F8 3.42074998219808 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10795 56.12 494.0 309290.0 25 0 28205.0 + 12394 SALGITAGAHRL 12 134 583.8359553934133 1165.6573578536263 2 583.8365356326103 MULTI CID FTMS 0 0 0 10785 417609.75 1.0 0 0.0 10 Unmodified _GTIGIFWFLL_ ENSG00000099194|ENST00000370355|SCD 57.47134341890925 0.0432192961576344 3 {[SA]|[TG]}{I|L}G{I|L}TAGAHR{I|L} 12 6 + 95.671 0.0 0.0 8.2075 8.2075 85.359 0.0 0.0 0.0 16.215003612500965 2.3692431413604 2.3692431413604 2.3692431413604 0 1.805462187404089 1.3010299956639813 0.7614393726401688 0.6549471895720985 {[SA]|[TG]}{I|L}G{I|L}TAGAHR{I|L};{[SA]|[TG]}{I|L}G{I|L}TA[RH]{I|L}Q;{[SA]|[TG]}{I|L}{I|L}GTAGAHR{I|L};{[SA]|[TG]}{I|L}{I|L}GTA[RH]{I|L}Q;{[SA]|[TG]}{I|L}G{I|L}TAQHR{I|L};{[SA]|[TG]}{I|L}G{I|L}TQAHR{I|L};{[SA]|[TG]}{I|L}{I|L}GTAQHR{I|L};{[SA]|[TG]}{I|L}{I|L}GTQAHR{I|L};{[SA]|[TG]}{I|L}G[WP]{I|L}G{I|L}[RP];{[SA]|[TG]}{I|L}G{I|L}TA[RH]Q{I|L} 8.2075;8.0042;7.976;7.7728;7.6403;7.4428;7.4088;7.2113;6.5739;6.3798 -;-;-;-;-;-;-;-;-;- 8485 + 1 1.51 117363.4 1.0 5460 5333 10785 HBL1_DMSO_200M_050219_1,10795 HBL1_DMSO_200M_050219_1,10795,GTIGIFWFLL True False SALGITAGAHRL 56.119862 583.83653563261 2788629.5 10785.0 ENSG00000099194|ENST00000370355|SCD 5.3852432568868 2.0 False 12.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10796 56.125 257.0 366960.0 25 0 29259.0 -1 0 124 471.20170161824734 470.19442515164735 1 472.2045776247978 MULTI CID FTMS 0 0 0 10785 341452.78125 1.0 0 0.0 11 3 {I|L} 1 -1 17.742 0.0 0.0 3.7734 0.0 0.0 339.099315143638 0.0 339.099315143638 0.0 4.643331241078172 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 3.7734 - 103 + 1 1.51 74395.7 1.0 5461 5333 10785 HBL1_DMSO_200M_050219_1,10796 HBL1_DMSO_200M_050219_1,10796, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10797 56.128 201.0 776460.0 25 0 130100.0 + 22022 LPPPPPPAM 9 125 458.7515933437354 915.4886337542708 2 459.2548400759697 MULTI CID FTMS 0 0 0 10785 343231.5 0.0903297067258071 39 -3.310089111328125 12 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 45.7499826716795 0.0496882803020414 3 PP 2 7 17.761 0.0 0.0 1.94 0.0 0.0 317.13926427656617 401.2199070934317 718.3591713699979 0.0 0.0 0.0 0.0 0 0.9802046884880936 0.0 0.0 0.0 + PP 1.94 + + 253 + 1 1.51 122125.1 1.0 5462 5333 10785 HBL1_DMSO_200M_050219_1,10797 HBL1_DMSO_200M_050219_1,10797,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10798 56.133 253.0 350160.0 25 0 41613.0 + 13818 HTLPHEIVV 9 113 522.7956195991952 0 522.7953369021416 PEAK CID FTMS 0 0 0 10785 242890.78125 1.0 0 0.0 13 Unmodified _HTLPHEIVV_ ENSG00000112159|ENST00000369393|MDN1 48.345845343767074 0.036192834052621 3 {I|L}EHP{I|L}E 6 6 33.215 0.0 0.0 3.1828 0.0 0.0 216.14515128494293 106.04175745181874 322.1869087367617 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.0629529932484498 0.0 {I|L}EHP{I|L}E 3.1828 - 229 + 1 1.51 73616.9 1.0 5463 5333 10785 HBL1_DMSO_200M_050219_1,10798 HBL1_DMSO_200M_050219_1,10798,HTLPHEIVV True True HTLPHEIVV 56.133185 522.795336902142 801636.6875 10785.0 ENSG00000112159|ENST00000369393|MDN1 5.222693681716919 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10799 56.145 665.0 227480.0 25 0 21525.0 + 32336 RYMEVSGNL 9 186 534.7609415217555 1067.507330110311 2 534.7605468630791 MULTI CID FTMS 0 0 0 10785 234444.390625 0.970445173140854 -1 0.07855224609375 14 Unmodified _RYMEVSGNL_ ENSG00000183431|ENST00000373019|SF3A3 63.960520009940105 0.0238892913700936 3 [VS][YT]EVSGN{I|L} 10 3 + 65.258 0.0 0.0 6.1131 6.1131 84.809 0.0 0.0 0.0 6.149706487232081 12.61506758977827 6.149706487232081 6.149706487232081 0 0.6307196863200843 0.9208187539523752 0.7302046884880937 0.3054621874040891 [VS][YT]EVSGN{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VSGN{I|L};[VG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EVSGN{I|L};[VS][YT]TVDGN{I|L};[{I|L}P][HC]EVSGN{I|L};[SG]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]VSGN{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ES]|[DT]|[{I|L}C]}EVSGN{I|L};[VS][YT]EVSGGG{I|L};[VS][YT]EVGSN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WH]VDGN{I|L} 6.1131;5.537;5.4499;5.4081;5.3542;5.1853;4.9726;4.9684;4.9235;4.8984 -;-;-;-;-;-;-;-;-;- 3846 1 1.51 121437.1 1.0 5464 5333 10785 HBL1_DMSO_200M_050219_1,10799 HBL1_DMSO_200M_050219_1,10799,RYMEVSGNL True True RYMEVSGNL 56.144768 534.760546863079 2016814.125 10785.0 ENSG00000183431|ENST00000373019|SF3A3 6.954092820485433 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10800 56.157 686.0 170310.0 25 0 7690.9 + 34447 SLYFFFMKFVL 11 121 721.3804909361194 1440.7464289390389 2 721.3820678591728 MULTI CID FTMS 0 0 0 10785 240434.359375 0.7987747980040959 -2 0.1499557495117187 15 Unmodified _SLYFFFMKFVL_ REV__ENST00000552933.2_1_12:49412567-49412867:+|nuORF 16.149105407346934 0.6992268271266642 3 {[SA]|[TG]}GGQ{I|L}{I|L}PSQSANV{I|L} 15 -1 + 101.28 0.0 0.0 7.0299 7.0299 80.086 0.0 0.0 0.0 9.791420733447552 16.69006780958577 9.791420733447552 0.7390874094431865 0 0.6549471895720984 0.958607314841775 2.774227503252014 0.3494850021680094 {[SA]|[TG]}GGQ{I|L}{I|L}PSQSANV{I|L};{[SA]|[TG]}NQ{I|L}{I|L}PSQSANV{I|L};{[SA]|[TG]}GP[WK]PSQSANV{I|L};{[SA]|[TG]}GGQ{I|L}{I|L}PS[AG]SANV{I|L};{[SA]|[TG]}GGQ{I|L}{I|L}PSQSAGGV{I|L};{[SA]|[TG]}NQ{I|L}{I|L}PS[AG]SANV{I|L};{[SA]|[TG]}N[AG]{I|L}{I|L}PSQSANV{I|L};{[SA]|[TG]}NQ{I|L}{I|L}PSQSAGGV{I|L};{[NV]|[RG]}A[WR]PSQSANV{I|L};{[SA]|[TG]}GPD{I|L}[RN]QSANV{I|L} 7.0299;6.9786;6.9312;6.4031;6.4031;6.3504;6.3504;6.3504;6.3503;6.323 -;-;-;-;-;-;-;-;-;- 6507 1 1.51 84575.2 1.0 5465 5333 10785 HBL1_DMSO_200M_050219_1,10800 HBL1_DMSO_200M_050219_1,10800,SLYFFFMKFVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10801 56.169 682.0 165250.0 25 0 14115.0 37737 TLQVNGRHEYL 11 103 665.3508517574453 0 665.3519164919853 PEAK CID FTMS 0 0 0 10785 216121.3125 0.7915751435212257 -3 0.2532386779785156 16 Unmodified _TLQVNGRHEYL_ ENSG00000171608|ENST00000377346|PIK3CD 17.11289562659939 0.3845757490720307 3 {I|L}EV 3 9 16.0 0.0 0.0 1.2042 0.0 0.0 845.4171231351706 139.0519198053344 984.469042940505 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6307196863200843 0.0 {I|L}EV 1.2042 - 118 + 1 1.51 89544.6 1.0 5466 5333 10785 HBL1_DMSO_200M_050219_1,10801 HBL1_DMSO_200M_050219_1,10801,TLQVNGRHEYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10802 56.181 600.0 161800.0 25 0 25329.0 -1 YACVCKCVYIY 11 138 692.8060790896416 0 692.8060790896416 PEAK CID FTMS 0 0 0 -1 0 17 Carbamidomethyl (C) _YACVCKC(Carbamidomethyl (C))VYIY_ ENST00000498707.5_1_3:64502565-64502754:-|nuORF 6.723162845929126 0.47618401536486 3 {I|L}DH 3 -1 16.075 0.0 0.0 1.1618 0.0 0.0 692.2314075915893 323.1731356256469 1015.4045432172364 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 {I|L}DH 1.1618 - 326 + 1 1.51 72007.5 1.0 5467 5333 10785 HBL1_DMSO_200M_050219_1,10802 HBL1_DMSO_200M_050219_1,10802,YACVCKCVYIY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10803 56.194 800.0 103300.0 25 0 5435.4 23620 LTPWYKNCIE 10 132 422.8784603892735 0 422.8792602419853 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _LTPWYKNCIE_ ENSG00000136937|ENST00000375147|NCBP1 10.823927491677226 0.3685635357628707 3 PD 2 9 7.9992 0.0 0.0 0.94806 0.0 0.0 532.5550337162439 96.08262811832265 628.6376618345665 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6462566630072955 0.0 PD 0.94806 - 38 + 1 1.51 78729.5 0.8500000238418579 5468 5333 10785 HBL1_DMSO_200M_050219_1,10803 HBL1_DMSO_200M_050219_1,10803,LTPWYKNCIE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10805 56.198 3.7 8485000.0 25 0 818520.0 + 4152 DAPHPPLKI 9 62 494.284652859862 986.554752786524 2 494.2849914431572 MULTI CID FTMS 0 0 0 10804 6585689.0 0.1466414189253762 -4 0.3552894592285156 1 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 14.838274106304384 0.4350285940865338 3 {[SA]|[TG]}{I|L}[WQ]AAK{I|L} 9 6 {[SA]|[TG]}{I|L}[WQ]AAK + + 11.42 1.4318 0.16737 1.1576 1.1576 48.404 0.0 0.0 0.0 0.0 -13.356313711455403 -13.356313711455403 0.0 0 0.0 0.0 0.0 0.0 {[SA]|[TG]}{I|L}[WQ]AAK{I|L} 1.1576 - 25 + 1 1.51 31415.7 1.0 5469 5334 10804 HBL1_DMSO_200M_050219_1,10805 HBL1_DMSO_200M_050219_1,10805,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10806 56.2 12.0 1962800.0 25 0 157310.0 + 36144 SVVDHFNRI 9 51 543.7873303109742 1085.5601076887483 2 543.7885619997978 MULTI CID FTMS 0 0 0 10804 1535225.5 0.1929889675550858 3 -0.2155494689941406 2 Unmodified _SVVDHFNRI_ ENSG00000103035|ENST00000219313|PSMD7;ENST00000422197.2_1_1:51837944-51838202:+|nuORF;ENST00000566015.1_1_16:74330767-74334139:+|nuORF 21.53697664764585 0.2571576504437394 3 [VS]VDH{M(Oxidation (M))|F} 6 3 55.278 0.0 0.0 5.0921 0.0 0.0 0.0 398.2170504205688 398.2170504205688 55.27819381628923 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + [VS]VDH{M(Oxidation (M))|F} 5.0921 + + 14 + 1 1.51 26629.9 1.0 5470 5334 10804 HBL1_DMSO_200M_050219_1,10806 HBL1_DMSO_200M_050219_1,10806,SVVDHFNRI False True SVVDHFNRI 56.199678 543.788561999798 406317968.0 10804.0 ENST00000422197.2_1_1:51837944-51838202:+|nuORF;;ENST00000566015.1_1_16:74330767-74334139:+|nuORF;;ENSG00000103035|ENST00000219313|PSMD7 6.830716133117676 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10807 56.201 11.0 4932400.0 25 0 641950.0 + 27933 PLTRPGPSL 9 68 469.276764901342 936.538976869484 2 469.2768737673759 MULTI CID FTMS 0 0 0 10804 2578380.0 0.1441530028493137 13 -1.1407203674316406 3 Unmodified _PLTRPGPSL_ REV__ENST00000291892.10_1_19:55558575-55559456:-|nuORF 20.453626601364224 0.2830276176381075 3 {I|L}PPEKG 6 -1 61.419 0.0 0.0 6.5581 0.0 0.0 0.0 312.15671716861567 312.15671716861567 54.42979712652914 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 {I|L}PPEKG 6.5581 - 64 + 1 1.51 51821.7 1.0 5471 5334 10804 HBL1_DMSO_200M_050219_1,10807 HBL1_DMSO_200M_050219_1,10807,PLTRPGPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10808 56.202 49.0 1098600.0 25 0 150760.0 -1 0 76 492.2129921884999 491.2057157219 1 492.2128173708916 MULTI CID FTMS 0 0 0 10804 477195.8125 0.8025191831327385 1 -0.0905838012695312 4 3 {M(Oxidation (M))|F}YY 3 -1 + 20.19 0.0 0.0 4.1102 4.1102 77.885 0.0 0.0 0.0 5.752574989159951 5.752574989159951 5.752574989159951 5.752574989159951 0 0.274227503252014 0.0 0.0 0.0 {M(Oxidation (M))|F}YY;[Y{M(Oxidation (M))|F}]Y 4.1102;2.9391 -;- 12 + 1 1.51 45793.4 1.0 5472 5334 10804 HBL1_DMSO_200M_050219_1,10808 HBL1_DMSO_200M_050219_1,10808, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10809 56.204 76.0 445650.0 25 0 51708.0 + 43187 VYWVARKPM 9 62 383.8794477079348 1148.6165137240043 3 383.8792297244072 MULTI CID FTMS 0 0 0 10804 425872.40625 0.6342940019941193 1 -0.0905838012695312 5 Unmodified _VYWVARKPM_ ENSG00000137038|ENST00000358227|DMAC1;nc|ENSG00000137038|Q96GE9|DMAC1 20.41453444215458 0.284085796332423 3 VYWV{M(Oxidation (M))|F} 5 4 54.949 0.0 0.0 4.7839 0.0 0.0 0.0 451.2792452447876 451.2792452447876 49.463950151760656 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 VYWV{M(Oxidation (M))|F} 4.7839 - 65 + 1 1.51 37184.9 1.0 5473 5334 10804 HBL1_DMSO_200M_050219_1,10809 HBL1_DMSO_200M_050219_1,10809,VYWVARKPM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10810 56.213 506.0 555490.0 25 0 34097.0 + 248 ACGRYGGQ 8 208 406.1789755107556 810.3433980883112 2 406.1783935427666 MULTI CID FTMS 0 0 0 10804 393252.65625 1.0 0 0.0 6 Unmodified _ACGRYGGQ_ REV__LTR12C_dup2369|chr15:80016340-80017800:+|3.1424161835883173|0.0607882817963977|5.69|48.0|1|1|sense 8.593279151180031 0.7721714526254883 3 AD[WY]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6 -1 + 26.954 0.0 0.0 3.3262 3.3262 74.39 0.0 0.0 0.0 6.020599913279625 4.349235749252074 4.349235749252074 4.349235749252074 0 0.0 0.1549019599857432 0.0 0.75 AD[WY]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};AD{[{M(Oxidation (M))|F}D]|MM}[KC]{I|L};DA[WY]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};AD{NN|[MP]|[D{I|L}]|[EV]}T[YN];DA{[{M(Oxidation (M))|F}D]|MM}[KC]{I|L};DE[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};A[W{M(Oxidation (M))|F}]M{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};AD{[{M(Oxidation (M))|F}D]|MM}[K{I|L}]C;DA{NN|[MP]|[D{I|L}]|[EV]}T[YN];[AG]{M(Oxidation (M))|F}M[RD]D 3.3262;2.7895;2.5833;2.1856;2.0465;1.9907;1.7734;1.6471;1.4427;0.90546 -;-;-;-;-;-;-;-;-;- 915 + 1 1.51 222438.5 1.0 5474 5334 10804 HBL1_DMSO_200M_050219_1,10810 HBL1_DMSO_200M_050219_1,10810,ACGRYGGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10811 56.221 435.0 212300.0 25 0 15071.0 + 13687 HQIEAVDGEEL 11 95 620.2963161633384 1238.5780793934766 2 620.2969848513603 MULTI CID FTMS 0 0 0 10804 335087.78125 0.0162545187245204 5 -0.4717483520507812 7 Unmodified _HQIEAVDGEEL_ ENSG00000105404|ENST00000222008|RABAC1;ENST00000595226.1_1_19:42461000-42461518:-|nuORF 64.9267550582149 0.0491502274424461 3 {[QN]|[E{I|L}]|[KN]}QHAVDGEE{I|L} 11 3 + 97.647 0.0 0.0 7.8838 7.8838 83.194 0.0 0.0 0.0 1.3043731003483998 16.575773191777927 1.3043731003483998 1.3043731003483998 0 0.7059771852360797 0.0 2.3956902196331544 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}QHAVDGEE{I|L};[HQ]{I|L}EAVDGEE{I|L};{[DA]|[EG]}[{I|L}A]HAVDGEE{I|L};{[QN]|[E{I|L}]|[KN]}[AG]HAVDGEE{I|L};{[QN]|[E{I|L}]|[KN]}QHG{I|L}DGEE{I|L};[HQ]{I|L}EG{I|L}DGEE{I|L};{[DA]|[EG]}[{I|L}A]HG{I|L}DGEE{I|L};[DG]VVHAVDGEE{I|L};[DV][VG]HAVDGEE{I|L};[VP]{[CA]|SS}HAVDGEE{I|L} 7.8838;7.7785;7.4636;7.1468;6.9481;6.8428;6.528;6.5064;6.486;6.3349 -;+;-;-;-;-;-;-;-;- + 1861 1 1.51 78230.4 1.0 5475 5334 10804 HBL1_DMSO_200M_050219_1,10811 HBL1_DMSO_200M_050219_1,10811,HQIEAVDGEEL True True HQIEAVDGEEL 56.220561 620.29698485136 350164560.0 10804.0 ENST00000595226.1_1_19:42461000-42461518:-|nuORF;;ENSG00000105404|ENST00000222008|RABAC1 7.470764478047688 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10812 56.224 164.0 406130.0 25 0 46086.0 + 9720 FLYDDNQRV 9 68 585.2832260003793 1168.5518990675585 2 585.2829467654228 MULTI CID FTMS 0 0 0 10804 274391.40625 0.8740890306991975 -1 0.10205078125 8 Unmodified _FLYDDNQRV_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 31.26834338654808 0.1333407332142048 3 {M(Oxidation (M))|F}{I|L}YDDNQ[RV] 9 0 + 54.887 0.0 0.0 4.697 4.697 83.352 0.0 0.0 0.0 42.668884535972325 3.2568864632742844 3.2568864632742844 9.208187539523747 0 0.4247425010840047 0.0 0.0 0.3807196863200844 + + {M(Oxidation (M))|F}{I|L}YDDNQ[RV];{M(Oxidation (M))|F}{I|L}YDDN[AG][RV];{M(Oxidation (M))|F}{I|L}YDDGGQ[RV];{M(Oxidation (M))|F}{I|L}YDDGG[AG][RV] 4.697;3.909;3.909;3.1248 +;-;-;- + 90 + 1 1.51 54966.1 1.0 5476 5334 10804 HBL1_DMSO_200M_050219_1,10812 HBL1_DMSO_200M_050219_1,10812,FLYDDNQRV False True FLYDDNQRV 56.223797 585.282946765423 3280443.0 10804.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;nc|ENSG00000131747|P11388-2|TOP2A;;ENSG00000077097|ENST00000264331|TOP2B 6.4286848704020185 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10813 56.233 508.0 364260.0 25 0 26709.0 + 45841 YYPTSSSTSF 10 158 570.2490508609632 1138.4835487887262 2 570.2493774294853 MULTI CID FTMS 0 0 0 10804 219655.5 0.3932339583885554 -6 0.524566650390625 9 Unmodified _YYPTSSSTSF_ ENSG00000102119|ENST00000369842|EMD;ENST00000471965.1_1_X:153609106-153609554:+|nuORF 48.345845343767074 0.089859443182303 3 YY[C(Carbamidomethyl (C))K]T[NG]S{M(Oxidation (M))|F} 9 6 + 38.964 0.0 0.0 3.4224 3.4224 77.949 0.0 0.0 0.0 12.997847792321394 6.161035825342637 6.161035825342637 7.686974415276435 0 0.3494850021680094 2.0 0.5283773187068795 0.2614393726401688 YY[C(Carbamidomethyl (C))K]T[NG]S{M(Oxidation (M))|F};YY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[W{I|L}]S{M(Oxidation (M))|F};YY[C(Carbamidomethyl (C))K]TS[NG]{M(Oxidation (M))|F};YY[C(Carbamidomethyl (C))K]TSS[KC];YY[C(Carbamidomethyl (C))K]T[YN]Q;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PSTS[QT]{[{M(Oxidation (M))|F}D]|MM};YY[C(Carbamidomethyl (C))K]T{[QG]|[NA]}[YG];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SPTS[QT]{[{M(Oxidation (M))|F}D]|MM};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}V{[C(Carbamidomethyl (C))E]|[WC]}{[{M(Oxidation (M))|F}D]|MM};YY[R{M(Oxidation (M))|F}][QT]{[{M(Oxidation (M))|F}D]|MM} 3.4224;2.7472;2.64;2.1112;1.9163;1.6097;1.389;1.3526;1.1749;1.1335 -;-;-;-;-;-;-;-;-;- 1153 + 1 1.51 138301.8 1.0 5477 5334 10804 HBL1_DMSO_200M_050219_1,10813 HBL1_DMSO_200M_050219_1,10813,YYPTSSSTSF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10814 56.245 680.0 335460.0 25 0 50478.0 + 10788 FYQDKLKSL 9 228 381.2129236972213 0 381.2130004763603 PEAK CID FTMS 0 0 0 10804 194015.453125 1.0 0 0.0 10 Unmodified _FYQDKLKSL_ ENSG00000162402|ENST00000294383|USP24 39.21299971606389 0.0655863606020873 3 DK{I|L}KS 5 4 20.324 0.0 0.0 2.6727 0.0 0.0 57.98206416679791 128.0721834772094 186.0542476440073 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.566901560044258 0.0 + DK{I|L}KS 2.6727 + + 95 + 1 1.51 178475.4 1.0 5478 5334 10804 HBL1_DMSO_200M_050219_1,10814 HBL1_DMSO_200M_050219_1,10814,FYQDKLKSL True True FYQDKLKSL 56.244574 381.21300047636 1701473.625 10804.0 ENSG00000162402|ENST00000294383|USP24 5.282727559407552 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10815 56.256 639.0 409190.0 25 0 22681.0 + 11921 GMAAEVPKV 9 224 451.243702137533 900.4728513418661 2 451.2443115115166 MULTI CID FTMS 0 0 0 10804 171176.90625 0.4766018223012644 1 -0.0905838012695312 11 Unmodified _GMAAEVPKV_ ENSG00000182183|ENST00000517870|SHISAL2A 38.61474834105838 0.0830609365873449 3 {[MG]|[TS]}AAEVPKV 9 0 + 39.099 0.0 0.0 4.3421 4.3421 77.125 0.0 0.0 0.0 26.88068305710508 10.792557050401598 10.792557050401598 4.3753063169585005 0 0.7614393726401688 0.0 0.3252574989159953 0.0941876774005248 + + {[MG]|[TS]}AAEVPKV;{[MG]|[TS]}AAPVEKV;{[MG]|[TS]}AAEVKPV;[DV][MN]VPKV;{[MG]|[TS]}AAEVVKP;[QA]MEVPKV;[QA]MPVEKV;{[MG]|[TS]}AAEVKVP;{[MG]|[TS]}[RD]VPKV;{[MG]|[TS]}AAPV[VG]TV 4.3421;3.8562;3.0004;2.8889;2.83;2.7771;2.2912;2.1831;1.9548;1.9262 +;-;-;-;-;-;-;-;-;- + 882 + 1 1.51 199122.7 1.0 5479 5334 10804 HBL1_DMSO_200M_050219_1,10815 HBL1_DMSO_200M_050219_1,10815,GMAAEVPKV True True GMAAEVPKV 56.255701 451.244311511517 4668353.0 10804.0 ENSG00000182183|ENST00000517870|SHISAL2A 5.663762251536052 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10816 56.27 800.0 309470.0 25 0 20571.0 + -1 QKEMEGPL 8 255 316.4886425364012 946.4440982094034 3 316.8228027224541 MULTI CID FTMS 0 0 0 10804 136034.890625 1.0 0 0.0 12 Oxidation (M) _QKEM(Oxidation (M))EGPL_ REV__ENSG00000143353|ENST00000366928|LYPLAL1;REV__ENST00000463964.5_1_1:219347256-219385067:+|nuORF;REV__ENST00000474379.5_1_1:219347271-219385067:+|nuORF;REV__ENST00000477938.5_1_1:219352746-219385067:+|nuORF;REV__nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1 6.723162845929126 0.7835230281555235 3 W 1 -1 10.0 0.0 0.0 1.0566 0.0 0.0 742.3542830011988 0.0 742.3542830011988 0.0 0.8513085769747875 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.0566 - 174 + 1 1.51 202438.8 0.9300000071525574 5480 5334 10804 HBL1_DMSO_200M_050219_1,10816 HBL1_DMSO_200M_050219_1,10816,QKEMEGPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10817 56.285 800.0 277240.0 25 0 15343.0 + 41505 VPNEHIMNV 9 206 526.7645795363343 1051.5146061394685 2 526.7646362185478 MULTI CID FTMS 0 0 0 10804 121627.0 0.1831559529411764 -3 0.2520065307617187 13 Unmodified _VPNEHIMNV_ ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF 53.40400417844725 0.0329064971918313 3 VNT{M(Oxidation (M))|F}{I|L}DMNV 9 4 + 83.812 0.0 0.0 7.9706 7.9706 82.138 0.0 0.0 0.0 64.71688900114513 13.46787486224656 13.46787486224656 0.6128836670222881 0 1.363364334130467 1.0969100130080565 0.3252574989159953 1.2134679910804405 VNT{M(Oxidation (M))|F}{I|L}DMNV;VP[HQ]{I|L}DMNV;VP[PA]P{I|L}DMNV;VNT{I|L}{M(Oxidation (M))|F}DMNV;VNT{M(Oxidation (M))|F}{I|L}DMVN;VP[HQ]{I|L}DMVN;VNT{M(Oxidation (M))|F}{I|L}DMGGV;VP[HQ]{I|L}DMGGV;V[HQ]P{I|L}DMNV;VP[PA]P{I|L}DMVN 7.9706;7.9124;7.5826;7.3059;6.5098;6.4515;6.4164;6.3581;6.3126;6.1217 -;-;-;-;-;-;-;-;-;- 10087 + 1 1.51 182586.1 0.9700000286102296 5481 5334 10804 HBL1_DMSO_200M_050219_1,10817 HBL1_DMSO_200M_050219_1,10817,VPNEHIMNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10819 56.289 6.5 5314400.0 25 0 1002400.0 + 22645 LPYQIKKI 8 56 334.88313194599925 1001.6275664381978 3 334.8829528689384 MULTI CID FTMS 0 0 0 10818 5228587.5 0.4920278888616198 2 -0.1249656677246093 1 Unmodified _LPYQIKKI_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 16.942295170755138 0.6606234159769251 3 {I|L}{I|L}{M(Oxidation (M))|F}[Q{I|L}]K{I|L}K 8 4 + 36.702 0.0 0.0 3.6642 3.6642 68.854 0.0 0.0 0.0 11.01519871977306 0.3778856088939974 0.3778856088939974 0.3778856088939974 0 0.0 0.0 0.0 0.5 {I|L}{I|L}{M(Oxidation (M))|F}[Q{I|L}]K{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}[Q{I|L}]KK{I|L};{I|L}PY[Q{I|L}]K{I|L}K;{I|L}PY[Q{I|L}]KK{I|L} 3.6642;3.6265;3.3637;3.3259 -;-;-;+ + 61 + 1 1.508 36940.1 1.0 5482 5335 10818 HBL1_DMSO_200M_050219_1,10819 HBL1_DMSO_200M_050219_1,10819,LPYQIKKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10820 56.29 3.8 14440000.0 25 0 1586200.0 + 4146 DAPHPPLKI 9 84 329.8590105895294 986.5552023687884 3 329.8589050173759 MULTI CID FTMS 0 0 0 10818 9688417.0 0.2240491364304311 -3 0.2711868286132812 2 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 14.838274106304384 0.4350285940865338 3 PH[HQ] 4 7 14.693 0.0 0.0 1.4893 0.0 0.0 469.3268910138688 0.0 469.3268910138688 0.0 7.703037561203843 0.0 0.0 0 0.0 0.0 0.0 0.0 PH[HQ] 1.4893 - 49 1 1.508 51176.3 1.0 5483 5335 10818 HBL1_DMSO_200M_050219_1,10820 HBL1_DMSO_200M_050219_1,10820,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10821 56.291 9.5 4387500.0 25 0 482880.0 + 4570 DAYRPVGL 8 75 445.7398859643411 889.4652189954822 2 445.7403137087822 MULTI CID FTMS 0 0 0 10818 4810505.0 0.682507308339683 -2 0.1926345825195312 3 Unmodified _DAYRPVGL_ ENSG00000179094|ENST00000317276|PER1;nc|ENSG00000179094|O15534-4|PER1 34.10243960390752 0.3329570729325616 3 {[DA]|[EG]}YR[VP]G{I|L} 8 0 + 51.904 0.0 0.0 5.8354 5.8354 90.094 0.0 0.0 0.0 34.21327198560853 10.974184576165342 10.974184576165342 20.0 0 1.1549471895720984 2.0 0.0 0.0 + + {[DA]|[EG]}YR[VP]G{I|L};WY[VG][VP]G{I|L};[VP][YK]W[TP];[YR]{[DA]|[EG]}[VP]G{I|L};[VP][YR]{[DA]|[EG]}G{I|L} 5.8354;3.5869;0.90738;0.4018;0.1617 +;-;-;-;- + 101 + 1 1.508 36885.6 1.0 5484 5335 10818 HBL1_DMSO_200M_050219_1,10821 HBL1_DMSO_200M_050219_1,10821,DAYRPVGL False True DAYRPVGL 56.291438 445.740313708782 49044416.0 10818.0 nc|ENSG00000179094|O15534-4|PER1;;ENSG00000179094|ENST00000317276|PER1 6.239332516988118 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10822 56.293 7.4 4041200.0 25 0 897600.0 13006 HAQKMVEFL 9 66 368.194404519104 1101.5613841575118 3 368.1942932009697 MULTI CID FTMS 0 0 0 10818 4815490.0 0.2727056603064096 24 -2.11977767944336 4 Unmodified _HAQKMVEFL_ ENSG00000169251|ENST00000351193|NMD3 7.289230182591677 0.6602208344931196 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q[YK]E{M(Oxidation (M))|F}{I|L} 8 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q[YK]E{M(Oxidation (M))|F} + + 13.979 3.9963 0.41179 1.2691 1.2691 48.447 0.0 0.0 0.0 0.0 -8.900925144087779 -8.900925144087779 0.0 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q[YK]E{M(Oxidation (M))|F}{I|L} 1.2691 - 55 + 1 1.508 28971.0 1.0 5485 5335 10818 HBL1_DMSO_200M_050219_1,10822 HBL1_DMSO_200M_050219_1,10822,HAQKMVEFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10823 56.294 20.0 3697400.0 25 0 609340.0 -1 PAADFMAGCTV 11 96 549.7343520916934 1097.454151250187 2 549.7353393435478 MULTI CID FTMS 0 0 0 10818 1904312.25 1.0 0 0.0 5 Oxidation (M) _PAADFM(Oxidation (M))AGCTV_ ENST00000566261.5_1_16:19179378-19184762:+|nuORF;ENST00000570264.5_1_16:19179378-19184762:+|nuORF 13.042465956692816 0.7638483625850725 3 [VG]DGVM 6 -1 32.273 0.0 0.0 2.9407 0.0 0.0 0.0 536.1811769672366 536.1811769672366 15.718173767286654 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2887254899964357 0.0 [VG]DGVM 2.9407 - 379 1 1.508 63559.6 1.0 5486 5335 10818 HBL1_DMSO_200M_050219_1,10823 HBL1_DMSO_200M_050219_1,10823,PAADFMAGCTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10824 56.295 19.0 4466400.0 25 0 456910.0 + 9932 FPGKHFQEI 9 92 551.7873955743806 1101.5602382155612 2 551.7876464724541 MULTI CID FTMS 0 0 0 10818 1841967.0 0.1397879435064453 24 -2.11977767944336 6 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 40.72490554402381 0.0714771638475563 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E 9 3 + 57.233 0.0 0.0 5.1956 5.1956 74.718 0.0 0.0 0.0 14.51544993495972 1.0083376013968604 1.0083376013968604 1.0083376013968604 0 0.805462187404089 1.6989700043360187 1.0 0.9247425010840048 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQE{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H{M(Oxidation (M))|F}Q{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]E{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H{M(Oxidation (M))|F}QE{I|L};[KG]P{M(Oxidation (M))|F}HQE{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H{M(Oxidation (M))|F}[AG]{I|L}E 5.1956;5.1041;4.6942;4.3805;4.3597;4.2682;3.879;3.8779;3.8582;3.5445 -;-;-;-;-;-;+;-;-;- + 796 1 1.508 71605.6 1.0 5487 5335 10818 HBL1_DMSO_200M_050219_1,10824 HBL1_DMSO_200M_050219_1,10824,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10825 56.296 22.0 1218100.0 25 0 175790.0 + 24836 MPKPDPTVI 9 51 499.2726053036181 996.5306576740362 2 499.2728759646416 MULTI CID FTMS 0 0 0 10818 1572755.25 0.4950207733345923 2 -0.1249656677246093 7 Unmodified _MPKPDPTVI_ ENSG00000152689|ENST00000403687|RASGRP3;nc|ENSG00000152689|Q8IV61-2|RASGRP3 26.88365393820708 0.1891292719743517 3 V{I|L} 2 7 20.445 0.0 0.0 2.0516 0.0 0.0 766.3668678564566 0.0 766.3668678564566 0.0 11.49288766643714 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + V{I|L} 2.0516 + + 43 + 1 1.508 29929.2 1.0 5488 5335 10818 HBL1_DMSO_200M_050219_1,10825 HBL1_DMSO_200M_050219_1,10825,MPKPDPTVI False True MPKPDPTVI 56.296152 499.272875964642 58102384.0 10818.0 ENSG00000152689|ENST00000403687|RASGRP3;;nc|ENSG00000152689|Q8IV61-2|RASGRP3 5.078260103861491 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10826 56.297 29.0 2133900.0 25 0 217830.0 + 22646 LPYQIKKI 8 82 501.8209002167648 1001.6272475003296 2 501.8210327029228 MULTI CID FTMS 0 0 0 10818 1536544.875 0.4942175978300734 2 -0.1249656677246093 8 Unmodified _LPYQIKKI_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 57.47134341890925 0.1146309765603773 3 {I|L}PYQ{I|L}KK{I|L} 8 0 + 76.637 0.0 0.0 7.6513 7.6513 93.092 0.0 0.0 0.0 49.568984397811136 11.40978057358332 11.40978057358332 9.262137858390815 0 1.174742501084005 1.6989700043360187 0.0 0.3054621874040891 + + {I|L}PYQ{I|L}KK{I|L};{I|L}PY[AG]{I|L}KK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}KK{I|L};{I|L}P{I|L}[YQ]KK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[AG]{I|L}KK{I|L};{I|L}{I|L}P[YQ]KK{I|L} 7.6513;6.7266;5.4303;4.9751;4.5056;2.7542 +;-;-;-;-;- + 417 + 1 1.508 53399.5 1.0 5489 5335 10818 HBL1_DMSO_200M_050219_1,10826 HBL1_DMSO_200M_050219_1,10826,LPYQIKKI True True LPYQIKKI 56.297332 501.821032702923 90781566.0 10818.0 nc|ENSG00000127481|Q5T4S7-2|UBR4;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4 4.12391463915507 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10827 56.299 33.0 1819200.0 25 0 128950.0 43518 WWWWIWWQWW 10 58 874.9044782998504 1747.7944036665008 2 875.4055053591728 MULTI CID FTMS 0 0 0 10818 1369135.125 0.3359887588618565 6 -0.5038299560546875 9 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 3 [NP]{I|L}NA[QP]QDAN 11 10 39.245 0.0 0.0 2.2454 0.0 0.0 0.0 582.2344975338054 582.2344975338054 22.012682651869937 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 [NP]{I|L}NA[QP]QDAN 2.2454 - 289 1 1.508 46137.9 1.0 5490 5335 10818 HBL1_DMSO_200M_050219_1,10827 HBL1_DMSO_200M_050219_1,10827,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 10828 56.3 23.0 1611000.0 25 0 81473.0 + 30649 RFPDGTNGL 9 75 488.7463658334003 975.4781787336008 2 488.7462951540947 MULTI CID FTMS 0 0 0 10818 1316889.125 0.5650821186656503 6 -0.5038299560546875 10 Unmodified _RFPDGTNGL_ ENSG00000164442|ENST00000367651|CITED2;nc|ENSG00000164442|Q99967-2|CITED2 31.26834338654808 0.1333407332142048 3 [R{M(Oxidation (M))|F}][DP]GTNG{I|L} 9 0 + 42.598 0.0 0.0 4.3668 4.3668 82.319 0.0 0.0 0.0 3.925449767853309 28.61818737241734 3.925449767853309 9.208187539523747 0 0.5 0.0 0.3494850021680094 0.0 + + [R{M(Oxidation (M))|F}][DP]GTNG{I|L};[R{M(Oxidation (M))|F}][DP]GTGGG{I|L} 4.3668;3.4229 +;- + 76 1 1.508 37810.2 1.0 5491 5335 10818 HBL1_DMSO_200M_050219_1,10828 HBL1_DMSO_200M_050219_1,10828,RFPDGTNGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10829 56.301 28.0 1674600.0 25 0 154900.0 + 44902 YPPPEVRNI 9 79 542.7931421868918 1083.5717314405836 2 542.7941161990166 MULTI CID FTMS 0 0 0 10818 881905.6875 0.0185611258720347 24 -2.11977767944336 11 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 17.44264345198275 0.3645313841742926 3 YPSS 4 7 51.67 0.0 0.0 4.7685 0.0 0.0 0.0 646.3717135065061 646.3717135065061 35.9568378181978 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPSS 4.7685 - 39 + 1 1.508 43315.4 1.0 5492 5335 10818 HBL1_DMSO_200M_050219_1,10829 HBL1_DMSO_200M_050219_1,10829,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10830 56.302 66.0 1563600.0 25 0 276320.0 -1 0 92 401.2531574295558 800.4917619259116 2 401.2526733279228 MULTI CID FTMS 0 0 0 10818 689535.625 0.2581188840893652 -3 0.2711868286132812 12 3 PHP{I|L}PK{I|L} 7 -1 + 60.847 0.0 0.0 7.6012 7.6012 96.142 0.0 0.0 0.0 46.62169974720313 12.429475895135838 12.429475895135838 35.81971839455732 0 1.5463049635635486 1.5228787452803376 0.0 0.2742275032520141 PHP{I|L}PK{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}PK{I|L};{[HG]|PP}{I|L}HPK{I|L};[{I|L}P]PHPK{I|L};{[HG]|PP}H{I|L}PK{I|L} 7.6012;3.1265;1.9426;1.8063;1.4461 -;-;-;-;- 94 + 1 1.508 85771.9 1.0 5493 5335 10818 HBL1_DMSO_200M_050219_1,10830 HBL1_DMSO_200M_050219_1,10830, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10831 56.305 123.0 436920.0 25 0 33437.0 -1 0 63 881.9127604281156 1761.810967923031 2 881.9124023318291 MULTI CID FTMS 0 0 0 10818 559531.375 0.4167237038441072 -5 0.4458732604980469 13 3 {I|L}N[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 14 -1 75.231 0.0 0.0 4.2701 0.0 0.0 211.0962238996109 0.0 211.0962238996109 0.0 51.58616365146053 0.0 0.0 0 1.2614393726401687 0.0 0.0 0.8494850021680094 {I|L}N[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.2701 - 733 1 1.508 42543.1 1.0 5494 5335 10818 HBL1_DMSO_200M_050219_1,10831 HBL1_DMSO_200M_050219_1,10831, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10832 56.308 138.0 229130.0 25 0 23447.0 + -1 KILDDSDSNLSV 12 55 653.3306634323188 1304.6467739314376 2 653.3307372927666 MULTI CID FTMS 0 0 0 10818 500010.4375 0.5461657066298012 2 -0.1249656677246093 14 Carbamidomethyl (C) _QIC(Carbamidomethyl (C))EMIVNLVS_ ENSG00000196862|ENST00000408999|RGPD4;ENSG00000153165|ENST00000409886|RGPD3;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3 24.99096001346401 0.505407273373304 3 [K{I|L}]{I|L}DD{[DS]|[MA]|[CV]|TT}SN{I|L}W 11 -1 + 60.467 0.0 0.0 4.6347 4.6347 84.925 0.0 0.0 0.0 6.979397778517615 45.774332329835694 6.979397778517615 12.998037644757048 0 0.5 1.0457574905606752 0.805462187404089 0.8494850021680094 [K{I|L}]{I|L}DD{[DS]|[MA]|[CV]|TT}SN{I|L}W;[K{I|L}]{I|L}DD{[C(Carbamidomethyl (C))E]|[WC]}N{I|L}SV;[K{I|L}]{I|L}DD[C(Carbamidomethyl (C))D]K{I|L}W;[HA][WK][YT]SN{I|L}SV 4.6347;3.6385;3.4394;2.9327 -;-;-;- 86 1 1.508 34603.4 1.0 5495 5335 10818 HBL1_DMSO_200M_050219_1,10832 HBL1_DMSO_200M_050219_1,10832,QICEMIVNLVS False False KILDDSDSNLSV 56.307838 653.330737292767 13009560.0 10818.0 ENSG00000196862|ENST00000408999|RGPD4;;ENSG00000153165|ENST00000409886|RGPD3;;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3 7.700941721598308 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10833 56.31 83.0 331820.0 25 0 25610.0 27610 PLEPDDEVF 9 65 530.7433095394466 1059.4720661456931 2 530.7435790896416 MULTI CID FTMS 0 0 0 10818 481730.09375 0.3061535068179565 6 -0.5038299560546875 15 Unmodified _PLEPDDEVF_ ENSG00000145979|ENST00000379300|TBC1D7;ENST00000607532.5_1_6:13307806-13327130:-|nuORF;nc|ENSG00000145979|Q9P0N9-2|TBC1D7;nc|ENSG00000145979|Q9P0N9-3|TBC1D7 15.847184025352805 0.4077185912009129 3 [{I|L}P]EPGN 6 5 40.679 0.0 0.0 3.8395 0.0 0.0 0.0 449.15441412836816 449.15441412836816 26.69933211002821 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 [{I|L}P]EPGN 3.8395 - 118 1 1.508 32086.9 1.0 5496 5335 10818 HBL1_DMSO_200M_050219_1,10833 HBL1_DMSO_200M_050219_1,10833,PLEPDDEVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10834 56.313 177.0 402270.0 25 0 21106.0 + 32179 RVVDDDGMTSL 11 104 604.2849889938086 1206.5554250544171 2 604.2852050662041 MULTI CID FTMS 0 0 0 10818 307383.9375 0.7750793239418241 -1 0.0905838012695312 16 Unmodified _RVVDDDGMTSL_ ENSG00000213337|ENST00000393537|ANKRD39 42.83518252547288 0.1687213420692654 3 DDGMTS{I|L} 7 4 57.74 0.0 0.0 4.7855 0.0 0.0 469.26525055130446 0.0 469.26525055130446 0.0 38.96668547897406 0.0 0.0 0 0.805462187404089 0.0 1.0 0.0 + DDGMTS{I|L} 4.7855 + + 787 1 1.508 56060.0 1.0 5497 5335 10818 HBL1_DMSO_200M_050219_1,10834 HBL1_DMSO_200M_050219_1,10834,RVVDDDGMTSL False True RVVDDDGMTSL 56.313167 604.285205066204 2886834.0 10818.0 ENSG00000213337|ENST00000393537|ANKRD39 7.2335530916849775 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10835 56.326 748.0 140210.0 25 0 35262.0 -1 0 38 1129.4642236933064 3385.370841680119 3 1130.134326159954 MULTI CID FTMS 0 0 0 10818 314228.3125 0.1884173707321906 4 -0.38116455078125 17 3 YW 2 -1 7.9588 0.0 0.0 0.23509 0.0 0.0 2000.6910047537272 1032.5184336933105 3033.209438447037 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YW 0.23509 - 6 + 1 1.508 97035.6 1.0 5498 5335 10818 HBL1_DMSO_200M_050219_1,10835 HBL1_DMSO_200M_050219_1,10835, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10836 56.329 156.0 381210.0 25 0 34283.0 + 28770 PYCEKDYQGL 10 99 405.8509920530803 1214.5311467594408 3 406.1866332888603 MULTI CID FTMS 0 0 0 10818 310870.125 1.0 0 0.0 18 Unmodified _PYCEKDYQGL_ ENSG00000099204|ENST00000533213|ABLIM1;nc|ENSG00000099204|O14639-2|ABLIM1;nc|ENSG00000099204|O14639-6|ABLIM1 7.910154910731844 0.6900473968920092 3 TEAPG{I|L} 6 7 20.214 0.0 0.0 1.6643 0.0 0.0 628.2360550619784 0.0 628.2360550619784 0.0 13.224279381983663 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 TEAPG{I|L} 1.6643 - 232 + 1 1.508 55990.3 1.0 5499 5335 10818 HBL1_DMSO_200M_050219_1,10836 HBL1_DMSO_200M_050219_1,10836,PYCEKDYQGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10837 56.334 236.0 460070.0 25 0 51495.0 + + 22689 LQDPGNHLI 9 133 503.76904761169527 1005.5235422901906 2 503.7698852419853 MULTI CID FTMS 0 0 0 10818 235002.59375 0.6486904060006651 -2 0.1926345825195312 19 Unmodified _LQDLQRSF_ ENSG00000110344|ENST00000252108|UBE4A;nc|ENSG00000110344|Q14139-2|UBE4A 46.020951573049366 0.1579632664462935 3 [Q{I|L}]D{I|L}YN[Q{I|L}] 8 -1 + 34.15 0.0 0.0 3.3963 3.3963 72.279 0.0 0.0 0.0 4.994959651335229 16.648904577930118 4.994959651335229 2.948675378691199 0 1.0629529932484498 0.8239087409443188 0.2887254899964357 0.75 [Q{I|L}]D{I|L}YN[Q{I|L}];[Q{I|L}]D[YN]{I|L}[Q{I|L}];[Q{I|L}]D[VP][YG][KS];[Q{I|L}]D[KS][NS][KS];[Q{I|L}][YN]D{I|L}[Q{I|L}];[Q{I|L}][YN]{I|L}D[Q{I|L}];[Q{I|L}]D{I|L}YGG[Q{I|L}];[Q{I|L}]D[KA][MT]S{I|L};[Q{I|L}]DP[NG][H{I|L}]{I|L};[Q{I|L}]D[KA][MT]TV 3.3963;3.103;3.0001;3.0001;2.8688;2.8566;2.4752;2.2556;2.1995;2.1891 -;-;-;-;-;-;-;-;-;- 452 1 1.508 86052.5 1.0 5500 5335 10818 HBL1_DMSO_200M_050219_1,10837 HBL1_DMSO_200M_050219_1,10837,LQDLQRSF False False LQDPGNHLI 56.333659 503.7702 3861426.25 10818.0 ENSG00000110344|ENST00000252108|UBE4A;;nc|ENSG00000110344|Q14139-2|UBE4A 2.276107827822367 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10838 56.339 267.0 408540.0 25 0 45263.0 + 643 EALVARAI 8 141 421.7585985663453 841.5026441994906 2 421.7584411501884 MULTI CID FTMS 0 0 0 10818 216613.8125 0.532737126763092 -2 0.1926345825195312 20 Unmodified _AELLGRLA_ ENSG00000144028|ENST00000323853|SNRNP200 36.04419817259434 0.3004715606373109 3 {[CP]|[EA]}{I|L}VARA{I|L} 8 4 + 34.089 0.0 0.0 4.051 4.051 78.818 0.0 0.0 0.0 22.830064962229216 3.672137691284405 3.672137691284405 6.804865986420055 0 0.6203715150305281 0.0 0.0 0.2302046884880938 {[CP]|[EA]}{I|L}VARA{I|L};{[CP]|[EA]}{I|L}VA[{I|L}A]R;{[CP]|[EA]}{I|L}{I|L}GRA{I|L};{[CP]|[EA]}{I|L}V{I|L}AAR;{[CP]|[EA]}{I|L}{I|L}G[{I|L}A]R;{[CP]|[EA]}{I|L}{I|L}[Q{I|L}]R;{[CP]|[EA]}{I|L}{I|L}VAAR 4.051;3.2423;2.8134;2.044;2.0048;0.96952;0.80651 -;-;-;-;-;-;- 149 + 1 1.508 89825.7 1.0 5501 5335 10818 HBL1_DMSO_200M_050219_1,10838 HBL1_DMSO_200M_050219_1,10838,AELLGRLA False False EALVARAI 56.338594 421.758441150188 2985733.5 10818.0 ENSG00000144028|ENST00000323853|SNRNP200 3.2153562704722085 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10840 56.345 220.0 287580.0 25 0 19303.0 + 22667 LPYSPTKTL 9 123 510.2934550297997 0 510.2926513552666 PEAK CID FTMS 0 0 0 10839 74370.390625 0.3899667942357697 1 -0.071319580078125 1 Unmodified _LPYSPTKTL_ ENSG00000136895|ENST00000373387|GARNL3;nc|ENSG00000136895|Q5VVW2-2|GARNL3;nc|ENSG00000136895|Q5VVW2-3|GARNL3;nc|ENSG00000136895|Q5VVW2-5|GARNL3 24.99096001346401 0.1558265925128033 3 PYS 3 6 18.561 0.0 0.0 1.8223 0.0 0.0 113.08483154627534 555.3150892633213 668.3999208095967 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.4247425010840047 0.0 + PYS 1.8223 + + 313 + 1 1.508 53136.9 1.0 5502 5336 10839 HBL1_DMSO_200M_050219_1,10840 HBL1_DMSO_200M_050219_1,10840,LPYSPTKTL False True LPYSPTKTL 56.344621 510.292651355267 1596849.625 10839.0 nc|ENSG00000136895|Q5VVW2-3|GARNL3;;ENSG00000136895|ENST00000373387|GARNL3;;nc|ENSG00000136895|Q5VVW2-2|GARNL3;;nc|ENSG00000136895|Q5VVW2-5|GARNL3 4.9832024574279785 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10841 56.348 172.0 408470.0 25 0 37769.0 -1 0 98 350.1951485304932 698.3757441277863 2 350.1947204470634 MULTI CID FTMS 0 0 0 10839 258957.8125 0.5855381444362517 -1 0.0536460876464843 2 3 [HV]S{M(Oxidation (M))|F}P{I|L} 6 -1 + 27.742 0.0 0.0 3.9724 3.9724 70.346 0.0 0.0 0.0 0.7128852219801018 7.547932899010075 0.7128852219801018 0.7128852219801018 0 0.6069758080123702 1.154901959985743 0.0 0.0 [HV]S{M(Oxidation (M))|F}P{I|L};[HS]{M(Oxidation (M))|F}VP{I|L};[HS]V{M(Oxidation (M))|F}P{I|L};[HS]{M(Oxidation (M))|F}PV{I|L};[HV][MT]V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV]P{I|L} 3.9724;3.8703;3.0019;2.7233;1.0026;0.17821 -;-;-;-;-;- 74 1 1.508 60584.4 1.0 5503 5336 10839 HBL1_DMSO_200M_050219_1,10841 HBL1_DMSO_200M_050219_1,10841, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10842 56.349 43.0 852330.0 25 0 89759.0 + 41101 VNVDEVGGEALGR 13 54 657.8362576971668 1313.6579624611336 2 657.8366577029228 MULTI CID FTMS 0 0 0 10839 999890.25 0.4641723484696821 -1 0.0536460876464843 3 Unmodified _VNLDDYNIHVI_ ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 15.248480904072842 0.7179608125786238 3 {[NV]|[RG]}VDEVGWA{I|L}GR 12 9 + 56.736 0.0 0.0 4.319 4.319 72.405 0.0 0.0 0.0 43.72109175890671 0.6736477506638039 0.6736477506638039 1.3433372144829647 0 1.960409376976188 0.0 0.0 0.0 {[NV]|[RG]}VDEVGWA{I|L}GR;{[NV]|[RG]}VDEVGW[Q{I|L}]R;{[NV]|[RG]}VDEVG{[DA]|[EG]}A{I|L}GR;{[NV]|[RG]}VDEVG{[DA]|[EG]}[Q{I|L}]R;{[NV]|[RG]}VDER{[DA]|[EG]}A{I|L}GR;{[NV]|[RG]}VDER{[DA]|[EG]}[Q{I|L}]R 4.319;4.2167;3.6264;3.5218;3.1208;3.0185 -;-;-;-;-;- 157 + 1 1.508 34382.3 1.0 5504 5336 10839 HBL1_DMSO_200M_050219_1,10842 HBL1_DMSO_200M_050219_1,10842,VNLDDYNIHVI False False VNVDEVGGEALGR 56.349181 657.836657702923 30129428.0 10839.0 ENSG00000244734|ENST00000335295|HBB;;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 9.881612141927084 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10843 56.35 48.0 386940.0 25 0 27216.0 + 21819 LPNNMIHQV 9 63 533.2779532123029 1064.5413534914055 2 533.7805663943291 MULTI CID FTMS 0 0 0 10839 441470.4375 1.0 0 0.0 4 Unmodified _LPNNMIHQV_ ENSG00000136731|ENST00000259253|UGGT1;nc|ENSG00000136731|Q9NYU2-2|UGGT1 12.531546534597751 0.4974689918368763 3 H{[QV]|[N{I|L}]|[RA]|[KV]} 3 6 7.7153 0.0 0.0 0.72475 0.0 0.0 682.3441316669902 0.0 682.3441316669902 0.0 0.7255998297264217 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + H{[QV]|[N{I|L}]|[RA]|[KV]} 0.72475 + + 16 + 1 1.508 20345.9 1.0 5505 5336 10839 HBL1_DMSO_200M_050219_1,10843 HBL1_DMSO_200M_050219_1,10843,LPNNMIHQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10844 56.353 149.0 485920.0 25 0 22222.0 + 4961 DGPRVFRV 8 102 315.847383145623 944.520320037069 3 315.8472167849541 MULTI CID FTMS 0 0 0 10839 259854.890625 0.957820002985644 -2 0.1442298889160156 5 Unmodified _DGPRVFRV_ ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF;nc|ENSG00000179115|Q9Y285-2|FARSA 21.74664581756881 0.5868176546531598 3 DGV[PG]V{M(Oxidation (M))|F} 7 4 46.952 0.0 0.0 4.971 0.0 0.0 0.0 270.15680872135005 270.15680872135005 34.30266160299768 0.0 0.0 0.0 0 0.2215141619232908 1.3010299956639813 0.0 0.0 DGV[PG]V{M(Oxidation (M))|F} 4.971 - 206 + 1 1.508 64278.6 1.0 5506 5336 10839 HBL1_DMSO_200M_050219_1,10844 HBL1_DMSO_200M_050219_1,10844,DGPRVFRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10845 56.356 130.0 380730.0 25 0 33655.0 + 43239 WCGANGYTV 9 91 485.7088043852245 969.403055837249 2 485.7088195681572 MULTI CID FTMS 0 0 0 10839 248987.203125 1.0 0 0.0 6 Unmodified _WCGANGYTV_ REV__MLT1J1_dup4306|chr16:29371502-29371847:-|3.3411625280608392|0.2295959552881518|3.86|41.0|18|2|anti-sense 8.593279151180031 0.6146971463335029 3 {[TV]|[{I|L}S]}A[RN]{I|L}A 7 -1 16.03 0.0 0.0 1.6536 0.0 0.0 0.0 240.97712745273648 240.97712745273648 0.0784749426325923 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 {[TV]|[{I|L}S]}A[RN]{I|L}A 1.6536 - 200 1 1.508 42895.1 1.0 5507 5336 10839 HBL1_DMSO_200M_050219_1,10845 HBL1_DMSO_200M_050219_1,10845,WCGANGYTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10846 56.367 636.0 249810.0 25 0 56386.0 -1 LPICSTSSSA 10 70 1022.481181869218 1021.473905402618 1 1022.482897937298 MULTI CID FTMS 0 0 0 10839 220059.453125 0.1975907650600367 -4 0.3248329162597656 7 Carbamidomethyl (C) _LPIC(Carbamidomethyl (C))STSSSA_ ENST00000445174.5_1_2:216480087-216485873:-|nuORF 20.453626601364224 0.5043500229302764 3 {I|L}P 2 -1 32.201 0.0 0.0 3.1524 0.0 0.0 0.0 808.3169039361936 808.3169039361936 2.0496470576112458 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 {I|L}P 3.1524 + + 136 + 1 1.508 108897.5 1.0 5508 5336 10839 HBL1_DMSO_200M_050219_1,10846 HBL1_DMSO_200M_050219_1,10846,LPICSTSSSA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10847 56.369 70.0 441720.0 25 0 63650.0 16959 KIPLHFSTA 9 70 507.2919647358608 1012.5693765385216 2 507.2925903201103 MULTI CID FTMS 0 0 0 10839 199422.859375 0.3204961163987533 -1 0.0536460876464843 8 Unmodified _KIPLHFSTA_ ENST00000392750.6_2_3:167437948-167437999:-|nuORF 3.944395688203298 0.7769873103969335 3 {I|L} 1 8 11.259 0.0 0.0 1.1119 0.0 0.0 881.4740986838325 0.0 881.4740986838325 0.0 0.6858659651265597 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1119 + + 53 + 1 1.508 29680.4 1.0 5509 5336 10839 HBL1_DMSO_200M_050219_1,10847 HBL1_DMSO_200M_050219_1,10847,KIPLHFSTA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10848 56.371 92.0 550860.0 25 0 49381.0 + -1 LLCVCVCV 8 92 511.7447996406749 1021.4750463481496 2 511.7430297732353 MULTI CID FTMS 0 0 0 10839 168354.859375 0.1404549569532791 -4 0.3248329162597656 9 3 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))VC(Carbamidomethyl (C))VC(Carbamidomethyl (C))V_ REV__ENST00000529021.1_1_11:7598511-7677986:+|nuORF;REV__ENST00000532926.5_1_11:7598511-7598697:+|nuORF 6.354104778181461 0.7857632046190106 3 V 1 -1 14.604 0.0 0.0 1.4297 0.0 0.0 904.395584228324 0.0 904.395584228324 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4297 + + 63 + 1 1.508 44804.6 1.0 5510 5336 10839 HBL1_DMSO_200M_050219_1,10848 HBL1_DMSO_200M_050219_1,10848,LLCVCVCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10849 56.378 405.0 412120.0 25 0 33449.0 + 3037 AVLDRMHSL 9 159 347.8552999368594 1040.5440704107782 3 347.8553649783134 MULTI CID FTMS 0 0 0 10839 180347.65625 0.0661126437904537 -2 0.1442298889160156 10 Unmodified _AVLDRMHSL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 68.08070601005525 0.0218408846571049 3 AV{I|L}D{[ET]|[MV]}{[HG]|PP}S{I|L} 10 2 + 68.408 0.0 0.0 6.5743 6.5743 80.985 0.0 0.0 0.0 24.9595372608497 2.04119982655925 2.04119982655925 2.04119982655925 0 0.3252574989159953 2.0 2.2302046884880937 0.0 AV{I|L}D{[ET]|[MV]}{[HG]|PP}S{I|L};AV{I|L}D{[ET]|[MV]}{[HG]|PP}TV;AV{I|L}[C(Carbamidomethyl (C))N][HK]S{I|L};AVQQV[PA]ES{I|L};AV{I|L}[C(Carbamidomethyl (C))N][HK]TV;AVQQV[PA]ETV;AV{I|L}D{I|L}[HM]{[QD]|[EN]|[WG]|[KD]|[RS]};AV{I|L}H[HA]{[HG]|PP}S{I|L};AV{I|L}H[HA]{[HG]|PP}TV;AV{I|L}{I|L}D[HM]{[QD]|[EN]|[WG]|[KD]|[RS]} 6.5743;6.3781;6.2781;6.2643;6.0819;6.0681;6.0358;5.8805;5.6844;5.3421 -;-;-;-;-;-;-;-;-;- 2047 + 1 1.508 146451.4 1.0 5511 5336 10839 HBL1_DMSO_200M_050219_1,10849 HBL1_DMSO_200M_050219_1,10849,AVLDRMHSL True True AVLDRMHSL 56.378131 347.855364978313 87652598.0 10839.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 6.902561187744141 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10850 56.389 605.0 358390.0 25 0 17873.0 + -1 CSRDDCSSI 9 210 521.7009777983804 0 521.7008544802666 PEAK CID FTMS 0 0 0 10839 174846.078125 1.0 0 0.0 11 Carbamidomethyl (C) _CSRDDC(Carbamidomethyl (C))SSI_ REV__chr12:54459453-54460377|33|11.94|0.67|4.16|-|ENST00000546931|GTSF1,GTSF1;REV__ENSG00000170627|ENST00000305879|GTSF1;REV__ENST00000546575.1_1_12:54852895-54857111:-|nuORF;REV__ENST00000552395.5_1_12:54852895-54867341:-|nuORF 7.910154910731844 0.3362437653303669 3 {I|L}D 2 -1 12.123 0.0 0.0 1.1641 0.0 0.0 170.9499319384699 639.3053269590617 810.2552588975316 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.0 {I|L}D 1.1641 - 563 + 1 1.508 169286.6 1.0 5512 5336 10839 HBL1_DMSO_200M_050219_1,10850 HBL1_DMSO_200M_050219_1,10850,CSRDDCSSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10851 56.399 581.0 127710.0 25 0 4957.7 + 2409 AQQEAQRAQFL 11 106 645.3340524306195 1288.653551928039 2 645.3358032107353 MULTI CID FTMS 0 0 0 10839 122321.3046875 1.0 0 0.0 12 Unmodified _AQQEAQRAQFL_ ENSG00000215021|ENST00000535923|PHB2 64.9267550582149 0.0491502274424461 3 [QA]QEAQRA{M(Oxidation (M))|F}K{I|L} 11 2 + 54.933 0.0 0.0 4.2629 4.2629 81.207 0.0 0.0 0.0 27.758213147904904 5.376244485044346 5.376244485044346 9.128498242810998 0 1.8979400086720373 0.0 0.4247425010840047 0.3807196863200844 [QA]QEAQRA{M(Oxidation (M))|F}K{I|L};[QA]QEAQ[VG]A{M(Oxidation (M))|F}K{I|L};[QA]QEA[AG]RA{M(Oxidation (M))|F}K{I|L};[QA][AG]EAQRA{M(Oxidation (M))|F}K{I|L};[QA]QEA[NG]{I|L}A{M(Oxidation (M))|F}K{I|L};[QA]QE{[QN]|[E{I|L}]|[KN]}{I|L}A{M(Oxidation (M))|F}K{I|L};[QA]QEAQ{[CA]|SS}{[TV]|[{I|L}S]}K{I|L};[QA]QEA[NG]M{[TV]|[{I|L}S]}K{I|L};[QA]C[PG]AQRA{M(Oxidation (M))|F}K{I|L};[QA]QE{[QN]|[E{I|L}]|[KN]}M{[TV]|[{I|L}S]}K{I|L} 4.2629;3.5545;3.5545;3.5545;3.4178;3.1384;2.9684;2.8317;2.5592;2.5522 -;-;-;-;-;-;-;-;-;- 1063 + 1 1.508 60714.1 1.0 5513 5336 10839 HBL1_DMSO_200M_050219_1,10851 HBL1_DMSO_200M_050219_1,10851,AQQEAQRAQFL True True AQQEAQRAQFL 56.3989 645.335803210735 1610459.625 10839.0 ENSG00000215021|ENST00000535923|PHB2 7.248069445292155 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10852 56.41 623.0 81451.0 25 0 9914.7 + -1 LYPHNCCKRLQ 11 81 744.8642780600921 1487.7140031869842 2 744.8627807497978 MULTI CID FTMS 0 0 0 10839 119655.296875 1.0 0 0.0 13 2 Carbamidomethyl (C) _LYPHNC(Carbamidomethyl (C))C(Carbamidomethyl (C))KRLQ_ REV__ENSG00000102038|ENST00000371121|SMARCA1;REV__ENSG00000153147|ENST00000283131|SMARCA5;REV__nc|ENSG00000102038|P28370-2|SMARCA1;REV__nc|ENSG00000102038|P28370|SMARCA1 16.149105407346934 0.6992268271266642 3 [NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAN{I|L}{[HG]|PP} 13 -1 + 39.429 0.0 0.0 2.6503 2.6503 75.584 0.0 0.0 0.0 3.1999430963671927 6.426094330551031 3.1999430963671927 6.642078980768069 0 0.4247425010840047 1.0457574905606752 0.0 0.0 [NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAN{I|L}{[HG]|PP};[NP]{I|L}[{M(Oxidation (M))|F}E][YV]WN{I|L}{[HG]|PP};[DP]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YV]DAN{I|L}{[HG]|PP};{[QV]|[N{I|L}]|[RA]|[KV]}P[{M(Oxidation (M))|F}E][YV]DAN{I|L}{[HG]|PP};[DP]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YV]WN{I|L}{[HG]|PP};{[QV]|[N{I|L}]|[RA]|[KV]}P[{M(Oxidation (M))|F}E][YV]WN{I|L}{[HG]|PP};{[QN]|[E{I|L}]|[KN]}Q{[ET]|[MV]}[YV]DAN{I|L}{[HG]|PP};[Q{I|L}]E{[ET]|[MV]}[YV]DAN{I|L}{[HG]|PP};{[QN]|[E{I|L}]|[KN]}Q{[ET]|[MV]}[YV]WN{I|L}{[HG]|PP};[Q{I|L}]E{[ET]|[MV]}[YV]WN{I|L}{[HG]|PP} 2.6503;2.2039;2.0687;1.9143;1.6222;1.4678;1.222;1.1569;0.77554;0.7104 -;-;-;-;-;-;-;-;-;- 308 1 1.508 43881.4 1.0 5514 5336 10839 HBL1_DMSO_200M_050219_1,10852 HBL1_DMSO_200M_050219_1,10852,LYPHNCCKRLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10854 56.414 4.8 7144900.0 25 0 1054100.0 + + 23607 QPITPGPSI 9 65 455.2557361064309 908.4969192796618 2 455.2557861208916 MULTI CID FTMS 0 0 0 10853 15133562.0 0.6897756555291763 4 -0.3788642883300781 1 Unmodified _LTPQPGPTV_ ENSG00000004487|ENST00000400181|KDM1A;ENST00000602503.1_1_1:23408727-23408946:+|nuORF;nc|ENSG00000004487|O60341|KDM1A 37.97399986684836 0.0865783450051559 3 [PS][PG]{I|L}AA 7 -1 31.625 0.0 0.0 3.481 0.0 0.0 0.0 312.1552584441643 312.1552584441643 14.43330808091051 0.0 0.0 0.0 0 0.3807196863200844 0.8860566476931632 0.9247425010840048 0.0 [PS][PG]{I|L}AA 3.481 - 87 1 1.508 32763.1 1.0 5515 5337 10853 HBL1_DMSO_200M_050219_1,10854 HBL1_DMSO_200M_050219_1,10854,LTPQPGPTV False False QPITPGPSI 56.414046 455.255786120892 1119346816.0 10853.0 ENSG00000004487|ENST00000400181|KDM1A;;ENST00000602503.1_1_1:23408727-23408946:+|nuORF;;nc|ENSG00000004487|O60341|KDM1A 5.691903273264567 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10855 56.415 15.0 2667000.0 25 0 436930.0 + 25769 NIVHDLPAA 9 71 475.2571947467793 948.4998365603584 2 475.2574035525322 MULTI CID FTMS 0 0 0 10853 3477223.25 1.0 0 0.0 2 Unmodified _NIVHDLPAA_ ENSG00000183527|ENST00000331573|PSMG1;ENST00000411828.5_1_21:40547518-40555177:-|nuORF;nc|ENSG00000183527|O95456-2|PSMG1 14.838274106304384 0.4350285940865338 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}N{I|L}[W{M(Oxidation (M))|F}] 7 8 + 33.996 0.0 0.0 3.5842 3.5842 80.856 0.0 0.0 0.0 19.39220077906249 2.9655257433751814 2.9655257433751814 9.33053210369387 0 0.5 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}N{I|L}[W{M(Oxidation (M))|F}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GG{I|L}[W{M(Oxidation (M))|F}];{[RE]|[WV]}RR[W{M(Oxidation (M))|F}] 3.5842;2.6005;0.41386 -;-;- 133 + 1 1.508 36374.6 1.0 5516 5337 10853 HBL1_DMSO_200M_050219_1,10855 HBL1_DMSO_200M_050219_1,10855,NIVHDLPAA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10856 56.416 25.0 2679000.0 25 0 293860.0 + 16770 KGAKAGII 8 72 379.250303198258 756.486053463316 2 379.2501403689384 MULTI CID FTMS 0 0 0 10853 3078828.0 1.0 0 0.0 3 Unmodified _KGAKAGII_ REV__ENSG00000168916|ENST00000513986|ZNF608;REV__nc|ENSG00000168916|Q9ULD9-2|ZNF608 5.760428011301431 0.7893668129297577 3 DK{I|L}R{I|L}{I|L} 6 -1 + 42.561 0.0 0.0 5.6261 5.6261 89.858 0.0 0.0 0.0 30.08655041508895 7.791681396005998 7.791681396005998 25.99607528951409 0 0.3494850021680094 0.0 0.0 0.7742275032520141 DK{I|L}R{I|L}{I|L};{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}R{I|L}{I|L} 5.6261;2.1897 -;- 29 + 1 1.508 56824.9 1.0 5517 5337 10853 HBL1_DMSO_200M_050219_1,10856 HBL1_DMSO_200M_050219_1,10856,KGAKAGII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10857 56.418 22.0 3844100.0 25 0 713270.0 + 44626 YPFKPPKV 8 79 325.86048683472575 974.5596311043772 3 325.8605224490166 MULTI CID FTMS 0 0 0 10853 2476475.5 0.0321067891316724 -30 2.427478790283203 4 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 56.776 0.0 0.0 5.8259 5.8259 58.479 0.0 0.0 0.0 28.62826806974688 0.0 0.0 0.0 0 0.25 1.2218487496163564 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;YP{M(Oxidation (M))|F}KPPVK;YP{M(Oxidation (M))|F}KPVPK;YP{M(Oxidation (M))|F}KVPPK;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]K[HS]VK;Y[{I|L}T]K[HS]KV 5.8259;5.8259;5.2676;5.0869;1.6567;0.90466;0.90466 +;-;-;-;-;-;- + 281 + 1 1.508 72286.1 1.0 5518 5337 10853 HBL1_DMSO_200M_050219_1,10857 HBL1_DMSO_200M_050219_1,10857,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10858 56.419 43.0 1227300.0 25 0 125560.0 + 22045 LPPPPPPHL 9 60 482.7845332676538 963.5545136021076 2 482.7845031619072 MULTI CID FTMS 0 0 0 10853 1958824.625 0.772697328876744 -3 0.2155494689941406 5 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 56.04830969593885 0.0282699710924866 3 {I|L}PPPPPP[H{I|L}] 9 0 + 85.679 0.0 0.0 8.892 8.892 97.464 0.0 0.0 0.0 78.68948444925195 7.147642715192504 7.147642715192504 22.21848749616356 0 0.805462187404089 2.0 0.0 0.0 + + {I|L}PPPPPP[H{I|L}];{I|L}PPP[YK][H{I|L}];{I|L}PP[YK]P[H{I|L}];{I|L}P[YK]PP[H{I|L}];{I|L}[YK]PPP[H{I|L}];{I|L}[YK][YK][H{I|L}] 8.892;6.5861;6.5861;6.191;3.6745;1.3757 +;-;-;-;-;- + 82 + 1 1.508 46707.5 1.0 5519 5337 10853 HBL1_DMSO_200M_050219_1,10858 HBL1_DMSO_200M_050219_1,10858,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10859 56.421 79.0 1353000.0 25 0 302200.0 + 15401 IPPDQQRLI 9 79 540.3145428572215 1078.6145327812428 2 540.3145629763603 MULTI CID FTMS 0 0 0 10853 1237223.5 0.0237551205405466 26 -2.143512725830078 6 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 41.8396318013385 0.0653578398400075 3 {I|L}PPDQQ 6 3 68.193 0.0 0.0 6.3222 0.0 0.0 0.0 397.26044641666255 397.26044641666255 54.16962393158403 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.805462187404089 + {I|L}PPDQQ 6.3222 + + 113 + 1 1.508 91828.4 1.0 5520 5337 10853 HBL1_DMSO_200M_050219_1,10859 HBL1_DMSO_200M_050219_1,10859,IPPDQQRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10860 56.422 84.0 1813300.0 25 0 271310.0 + 21125 LPAPNTATVV 10 135 491.78165047517246 981.5487480171448 2 492.2841064333916 MULTI CID FTMS 0 0 0 10853 721058.0625 1.0 0 0.0 7 Unmodified _LPAPNTATVV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 36.12702656103203 0.1984647928738587 3 [NP]APSVVTVV 10 4 [NP]APSVVT + + 17.747 13.414 1.7526 1.8081 1.8081 48.703 0.0 0.0 0.0 0.0 0.698084179589312 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 [NP]APSVVTVV 1.8081 - 997 + 1 1.508 116232.9 1.0 5521 5337 10853 HBL1_DMSO_200M_050219_1,10860 HBL1_DMSO_200M_050219_1,10860,LPAPNTATVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10861 56.429 344.0 759030.0 25 0 56930.0 + 3039 AVLDRMHSL 9 198 521.2786831652758 1040.5428133973514 2 521.2792846560478 MULTI CID FTMS 0 0 0 10853 618961.0 0.3685846084494562 -1 0.071319580078125 8 Unmodified _AVLDRMHSL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 110.5527297667825 0.0053998527608258 3 {I|L}G{I|L}DRMHS{I|L} 9 2 + 98.638 0.0 0.0 9.4795 9.4795 84.433 0.0 0.0 0.0 0.9948500216800936 6.645293596321125 0.9948500216800936 0.9948500216800936 0 2.1237125054200234 2.0 2.3243923658886185 0.2887254899964357 {I|L}G{I|L}DRMHS{I|L};AV{I|L}DRMHS{I|L};{I|L}G{I|L}DRMHVT;AV{I|L}DRMHVT;{I|L}G{I|L}DRMHTV;AV{I|L}DRMHTV;{I|L}G{I|L}H[HQ]HS{I|L};AV{I|L}H[HQ]HS{I|L};{I|L}G{I|L}S[WE]HS{I|L};AV{I|L}S[WE]HS{I|L} 9.4795;9.3839;8.8408;8.7452;8.5104;8.4148;8.2114;8.1158;8.1006;8.005 -;+;-;-;-;-;-;-;-;- + 3619 + 1 1.508 204482.7 1.0 5522 5337 10853 HBL1_DMSO_200M_050219_1,10861 HBL1_DMSO_200M_050219_1,10861,AVLDRMHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10862 56.431 139.0 823000.0 25 0 87665.0 + 36142 SVVDHFNRI 9 119 362.86128109174535 1085.5620138754362 3 362.8601257205009 MULTI CID FTMS 0 0 0 10853 541459.6875 0.0378356989102297 6 -0.54437255859375 9 Unmodified _SVVDHFNRI_ ENSG00000103035|ENST00000219313|PSMD7;ENST00000422197.2_1_1:51837944-51838202:+|nuORF;ENST00000566015.1_1_16:74330767-74334139:+|nuORF 29.081581746732265 0.1611639662936252 3 [VS]VDH{M(Oxidation (M))|F}{I|L}[RN] 9 2 + 60.569 0.0 0.0 5.5795 5.5795 57.665 0.0 0.0 0.0 41.98515608797898 2.3764301679958777 2.3764301679958777 0.0 0 0.3494850021680094 2.0 0.7742275032520141 0.0 [VS]VDH{M(Oxidation (M))|F}{I|L}[RN];[VS]VDH{I|L}{M(Oxidation (M))|F}[RN];[VS]VD{I|L}H{M(Oxidation (M))|F}[RN];[VS]VDH{M(Oxidation (M))|F}[RN]{I|L};[VS]VDH{I|L}{[NV]|[RG]}{[CT]|[{M(Oxidation (M))|F}G]};[VS]VD{I|L}H{[NV]|[RG]}{[CT]|[{M(Oxidation (M))|F}G]};[VS]V{I|L}DH{M(Oxidation (M))|F}[RN];[VS]{I|L}VDH{M(Oxidation (M))|F}[RN];[VS]V{I|L}DH{[NV]|[RG]}{[CT]|[{M(Oxidation (M))|F}G]};[VS]{I|L}VDH{[NV]|[RG]}{[CT]|[{M(Oxidation (M))|F}G]} 5.5795;5.5795;5.3022;5.1551;5.0557;4.7784;4.7476;4.2857;4.2237;3.7619 -;-;-;+;-;-;-;-;-;- + 367 + 1 1.508 96511.3 1.0 5523 5337 10853 HBL1_DMSO_200M_050219_1,10862 HBL1_DMSO_200M_050219_1,10862,SVVDHFNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10863 56.44 504.0 516580.0 25 0 59343.0 + 45169 YQIHKEYLL 9 179 402.888846922195 1205.644711366785 3 402.8888427615166 MULTI CID FTMS 0 0 0 10853 394683.4375 1.0 0 0.0 10 Unmodified _YQIHKEYLL_ ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR 61.60191391372663 0.0251951588191061 3 {I|L}HREY{I|L}E 7 4 32.7 0.0 0.0 2.7122 0.0 0.0 0.0 262.1316342812832 262.1316342812832 13.380252196056636 0.0 0.0 0.0 0 0.1435078169319297 0.5528419686577808 0.9361818737241736 0.0 {I|L}HREY{I|L}E 2.7122 - 2193 + 1 1.508 200566.6 1.0 5524 5337 10853 HBL1_DMSO_200M_050219_1,10863 HBL1_DMSO_200M_050219_1,10863,YQIHKEYLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10864 56.449 465.0 394160.0 25 0 38002.0 + -1 GQISDRPSLSV 11 145 579.3054599812413 1156.5963670292824 2 579.8088256716728 MULTI CID FTMS 0 0 0 10853 340535.09375 0.8161203557606498 -1 0.071319580078125 11 2 Carbamidomethyl (C) _VSVLC(Carbamidomethyl (C))PLC(Carbamidomethyl (C))PL_ nc|ENSG00000239961|P59901-2|LILRA4;ENSG00000239961|ENST00000291759|LILRA4 30.63653989081413 0.2803493085145199 3 [VS]VW[PS]{I|L}{[QG]|[NA]}GQ 11 -1 + 38.17 0.0 0.0 3.3002 3.3002 68.011 0.0 0.0 0.0 3.204260520835092 -2.103542365304449 -2.103542365304449 0.3959062302381255 0 0.0 1.0457574905606752 0.9802046884880936 0.3252574989159953 [VS]VW[PS]{I|L}{[QG]|[NA]}GQ;[VS]VW[PS]{[QG]|[NA]}{I|L}GQ;[VS]VW{[QG]|[NA]}[PS]{I|L}GQ;[PS]{I|L}SDR[RP]MV;[VS]V{I|L}EE[PS]{I|L}GQ;[VS]VW[PS]{I|L}{[QN]|[E{I|L}]|[KN]}Q;[VS]VQQN{I|L}{[QG]|[NA]}GQ;[VS]VQQN{[QG]|[NA]}{I|L}GQ;[VS]V{I|L}[DG][R{M(Oxidation (M))|F}]HQ;[{I|L}V]SVEE[PS]{I|L}GQ 3.3002;3.266;3.1541;3.0164;2.8623;2.7107;2.5194;2.4852;2.4569;2.3916 -;-;-;-;-;-;-;-;-;- 4342 1 1.508 138891.3 1.0 5525 5337 10853 HBL1_DMSO_200M_050219_1,10864 HBL1_DMSO_200M_050219_1,10864,VSVLCPLCPL False False GQISDRPSLSV 56.448625 579.808825671673 4263303.0 10853.0 nc|ENSG00000239961|P59901-2|LILRA4;;ENSG00000239961|ENST00000291759|LILRA4 6.762625058492024 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10865 56.457 485.0 338180.0 25 0 27965.0 + -1 YFYGGLMTTQF 11 139 672.3044815370328 1342.5944101408654 2 672.3048583865166 MULTI CID FTMS 0 0 0 10853 330765.65625 0.3386443222331038 8 -0.7562179565429688 12 Oxidation (M) _YFYGGLM(Oxidation (M))TTQF_ REV__ENSG00000156006|ENST00000286479|NAT2 20.41453444215458 0.6105011870913812 3 Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}EK[WC(Carbamidomethyl (C))]{M(Oxidation (M))|F} 8 -1 46.375 0.0 0.0 3.4541 0.0 0.0 0.0 132.04599939517814 132.04599939517814 19.476373025699875 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.5 0.8494850021680094 Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}EK[WC(Carbamidomethyl (C))]{M(Oxidation (M))|F} 3.4541 - 2563 + 1 1.508 120195.5 1.0 5526 5337 10853 HBL1_DMSO_200M_050219_1,10865 HBL1_DMSO_200M_050219_1,10865,YFYGGLMTTQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10866 56.466 484.0 370660.0 25 0 69754.0 + + 1757 AIYDHINEGV 10 139 565.2778567556355 1128.541160578071 2 565.7780029177666 MULTI CID FTMS 0 0 0 10853 306642.03125 0.6385419900033252 -1 0.071319580078125 13 Unmodified _ALREMIMEH_ nc|ENSG00000184076|Q9UDW1-2|UQCR10 12.531546534597751 0.4974689918368763 3 [HD]Y{I|L}NEGV 8 -1 45.909 0.0 0.0 4.068 0.0 0.0 0.0 198.0986916662147 198.0986916662147 12.22038662737414 0.0 0.0 0.0 0 0.0 1.0 0.6549471895720984 0.5994850021680094 [HD]Y{I|L}NEGV 4.068 - 5306 1 1.508 141371.7 1.0 5527 5337 10853 HBL1_DMSO_200M_050219_1,10866 HBL1_DMSO_200M_050219_1,10866,ALREMIMEH False False AIYDHINEGV 56.465775 565.778002917767 3834467.75 10853.0 nc|ENSG00000184076|Q9UDW1-2|UQCR10 8.368922710418701 2.0 False 10.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10867 56.47 203.0 485330.0 25 0 30747.0 + 32432 SAATPMTQI 9 142 460.23151851677466 918.4484841003492 2 460.2311584353447 MULTI CID FTMS 0 0 0 10853 346070.90625 1.0 0 0.0 14 Unmodified _SAATPMTQI_ ENSG00000143190|ENST00000367866|POU2F1;ENST00000470928.3_1_1:167334720-167353117:+|nuORF;ENST00000560232.6_1_1:167301714-167356435:+|nuORF;nc|ENSG00000143190|P14859-2|POU2F1;nc|ENSG00000143190|P14859-3|POU2F1;nc|ENSG00000143190|P14859-4|POU2F1;nc|ENSG00000143190|P14859|POU2F1 34.40172386719151 0.1061884637610825 3 {[SA]|[TG]}ATP 5 4 33.126 0.0 0.0 3.6067 0.0 0.0 0.0 488.21615923146186 488.21615923146186 15.690839627454835 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.4916440611282626 0.0 + {[SA]|[TG]}ATP 3.6067 + + 343 1 1.508 80224.4 1.0 5528 5337 10853 HBL1_DMSO_200M_050219_1,10867 HBL1_DMSO_200M_050219_1,10867,SAATPMTQI True True SAATPMTQI 56.469643 460.231158435345 1143581.75 10853.0 nc|ENSG00000143190|P14859-4|POU2F1;;ENSG00000143190|ENST00000367866|POU2F1;;nc|ENSG00000143190|P14859|POU2F1;;nc|ENSG00000143190|P14859-2|POU2F1;;ENST00000560232.6_1_1:167301714-167356435:+|nuORF;;ENST00000470928.3_1_1:167334720-167353117:+|nuORF;;nc|ENSG00000143190|P14859-3|POU2F1 4.803968111673991 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10868 56.481 558.0 497560.0 25 0 31129.0 + 36176 SVVPDVRSV 9 206 479.2713931049309 956.5282332766618 2 479.2716552615166 MULTI CID FTMS 0 0 0 10853 256268.0625 0.8653849319665436 -1 0.071319580078125 15 Unmodified _SVVPDVRSV_ chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1;ENSG00000073584|ENST00000348513|SMARCE1;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;nc|ENSG00000073584|Q969G3-2|SMARCE1;nc|ENSG00000073584|Q969G3-3|SMARCE1;nc|ENSG00000073584|Q969G3-4|SMARCE1;nc|ENSG00000073584|Q969G3-5|SMARCE1;nc|ENSG00000073584|Q969G3-6|SMARCE1 23.78978130925829 0.2284941198415988 3 [VS]VPDV 6 3 48.505 0.0 0.0 5.0709 0.0 0.0 0.0 357.1895846002563 357.1895846002563 32.421525057367404 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + [VS]VPDV 5.0709 + + 360 + 1 1.508 208309.7 1.0 5529 5337 10853 HBL1_DMSO_200M_050219_1,10868 HBL1_DMSO_200M_050219_1,10868,SVVPDVRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10869 56.484 192.0 374070.0 25 0 26196.0 + -1 TAEMQSRTAL 10 126 562.2744865770784 1122.5344202209567 2 562.2740356326103 MULTI CID FTMS 0 0 0 10853 249204.734375 0.6974322728938788 -1 0.071319580078125 16 Oxidation (M) _TAEM(Oxidation (M))QSRTAL_ REV__ENST00000422884.1_1_10:75491660-75492464:+|nuORF 32.78568957990786 0.2337485590374503 3 YYHEAGVTA{I|L} 10 -1 + 70.831 0.0 0.0 6.3099 6.3099 85.881 0.0 0.0 0.0 15.5284196865778 5.903630620667286 5.903630620667286 6.532125137753425 0 0.8633643341304672 1.6989700043360187 0.8252574989159953 0.0 YYHEAGVTA{I|L};YYHEQVTA{I|L};YYHEARTA{I|L};{[WN]|[YH]}YEAGVTA{I|L};YYHEAKEA{I|L};{[YC]|[HE]}YYAGVTA{I|L};{[WN]|[YH]}EYAGVTA{I|L};{[WN]|[YH]}YEQVTA{I|L};{[WN]|[YH]}YEARTA{I|L};{[YC]|[HE]}AGVYYTA{I|L} 6.3099;5.728;5.728;4.9266;4.8588;4.5879;4.3902;4.3447;4.3447;4.255 -;-;-;-;-;-;-;-;-;- 1544 1 1.508 62048.1 1.0 5530 5337 10853 HBL1_DMSO_200M_050219_1,10869 HBL1_DMSO_200M_050219_1,10869,TAEMQSRTAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10870 56.497 714.0 202340.0 25 0 10232.0 + 24432 MGPPTECAMTM 11 180 584.7269219055186 1167.439290877837 2 584.7276489138603 MULTI CID FTMS 0 0 0 10853 224294.21875 1.0 0 0.0 17 Unmodified _MGPPTECAMTM_ REV__ENSG00000169856|ENST00000305901|ONECUT1 18.1463463914782 0.6576820063886638 3 TM 2 -1 27.123 0.0 0.0 2.3233 0.0 0.0 917.3400108791338 0.0 917.3400108791338 0.0 7.436274740620785 0.0 0.0 0 0.805462187404089 0.0 0.2614393726401688 0.0 TM 2.3233 + + 1587 + 1 1.508 110951.6 1.0 5531 5337 10853 HBL1_DMSO_200M_050219_1,10870 HBL1_DMSO_200M_050219_1,10870,MGPPTECAMTM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10871 56.51 762.0 204620.0 25 0 23423.0 44110 YKTKECKMRI 10 131 650.3516781850672 0 650.3512451052666 PEAK CID FTMS 0 0 0 10853 196485.5 0.9571217250165068 1 -0.1150894165039062 18 Unmodified _YKTKECKMRI_ ENSG00000151338|ENST00000684589|MIPOL1;ENST00000553349.1_1_14:37754581-37892775:+|nuORF;ENST00000554930.5_1_14:37667225-37854725:+|nuORF;nc|ENSG00000151338|Q8TD10-2|MIPOL1 13.90604991867851 0.345182617568752 3 VDVV 4 10 14.954 0.0 0.0 1.1514 0.0 0.0 666.363499337128 217.0627840631469 883.4262834002749 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 VDVV 1.1514 - 391 + 1 1.508 115350.4 1.0 5532 5337 10853 HBL1_DMSO_200M_050219_1,10871 HBL1_DMSO_200M_050219_1,10871,YKTKECKMRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10872 56.525 800.0 71229.0 25 0 2736.0 5513 DLVTYITRFQW 11 111 721.3804909361194 1440.7464289390389 2 721.3825561404228 MULTI CID FTMS 0 0 0 10853 180462.546875 0.599535502338736 2 -0.2561988830566406 19 Unmodified _DLVTYITRFQW_ ENSG00000155097|ENST00000518738|ATP6V1C1 13.042465956692816 0.7638483625850725 3 {NN|[MP]|[D{I|L}]|[EV]}VT[TP]T[NP]SANV{I|L} 14 9 + 63.916 0.0 0.0 4.4363 4.4363 78.155 0.0 0.0 0.0 25.00602350569185 16.667853209646175 16.667853209646175 4.894678307206597 0 0.1861818737241735 1.5228787452803376 0.8494850021680094 0.5 {NN|[MP]|[D{I|L}]|[EV]}VT[TP]T[NP]SANV{I|L};{NN|[MP]|[D{I|L}]|[EV]}V[W{I|L}]T[NP]SANV{I|L};{NN|[MP]|[D{I|L}]|[EV]}VH[KQ]{[MS]|[{M(Oxidation (M))|F}A]}SANV{I|L};{NN|[MP]|[D{I|L}]|[EV]}VT[WY][YR]NV{I|L};[{I|L}V]DT[TP]T[NP]SANV{I|L};[{I|L}V]D[W{I|L}]T[NP]SANV{I|L};[{I|L}P]AEE[HT][YR]NV{I|L};[{I|L}P]AEE{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[NV]|[RG]}ANV{I|L};[{I|L}V]DH[KQ]{[MS]|[{M(Oxidation (M))|F}A]}SANV{I|L};[{I|L}V]DT[WY][YR]NV{I|L} 4.4363;4.0966;3.7189;3.4714;2.7007;2.3609;2.1691;2.09;1.9833;1.7358 -;-;-;-;-;-;-;-;-;- 1217 1 1.508 44134.0 0.959999978542328 5533 5337 10853 HBL1_DMSO_200M_050219_1,10872 HBL1_DMSO_200M_050219_1,10872,DLVTYITRFQW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10874 56.529 1.6 30569000.0 25 0 4134100.0 + 4153 DAPHPPLKI 9 67 494.284652859862 986.554752786524 2 494.2852966189384 MULTI CID FTMS 0 0 0 10873 44910156.0 1.0 0 0.0 1 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 36.12702656103203 0.0967173616627612 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ADP[{I|L}P]K{I|L} 9 3 + 25.384 0.0 0.0 2.573 2.573 81.514 0.0 0.0 0.0 4.304009240123886 13.394484365698748 4.304009240123886 25.38418440905893 0 1.4291746928241125 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ADP[{I|L}P]K{I|L} 2.573 - 67 1 1.501 44577.6 1.0 5534 5338 10873 HBL1_DMSO_200M_050219_1,10874 HBL1_DMSO_200M_050219_1,10874,DAPHPPLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10875 56.53 18.0 2667300.0 25 0 299570.0 + 21887 LPPEVNRI 8 62 469.276764901342 936.538976869484 2 469.2768432497978 MULTI CID FTMS 0 0 0 10873 2690790.25 0.1504376758178219 17 -1.6032028198242188 2 Unmodified _LPPEVNRI_ ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 14.838274106304384 0.6917062315640577 3 {I|L}PPE 4 4 51.67 0.0 0.0 5.5171 0.0 0.0 0.0 497.2859285943969 497.2859285943969 44.68047529268127 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPE 5.5171 + + 26 + 1 1.501 44620.6 1.0 5535 5338 10873 HBL1_DMSO_200M_050219_1,10875 HBL1_DMSO_200M_050219_1,10875,LPPEVNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10876 56.531 25.0 4961200.0 25 0 449160.0 + -1 CSTKMTFCM 9 132 591.2245078789098 1180.4344628246197 2 591.2252075076103 MULTI CID FTMS 0 0 0 10873 3205692.25 0.3987344810882391 -2 0.1864089965820312 3 2 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))STKMTFC(Carbamidomethyl (C))M(Oxidation (M))_ REV__ENSG00000086300|ENST00000338523|SNX10 10.073929032068715 0.563993802247229 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QNM 5 -1 32.783 0.0 0.0 2.7772 0.0 0.0 0.0 570.1683244791694 570.1683244791694 14.722040133566423 0.0 0.0 0.0 0 0.25 1.6989700043360187 0.0 0.6382104921644451 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QNM 2.7772 - 511 1 1.501 92531.9 1.0 5536 5338 10873 HBL1_DMSO_200M_050219_1,10876 HBL1_DMSO_200M_050219_1,10876,CSTKMTFCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10877 56.533 32.0 1113300.0 25 0 74872.0 + + 2325 AQIKEMVEL 9 75 538.789498991656 1075.564445050112 2 538.7871581912041 MULTI CID FTMS 0 0 0 10873 1181632.125 0.8348273234606524 5 -0.4292831420898437 4 Unmodified _AQISNFGLNI_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 17.11289562659939 0.5604042439455784 3 [QA]{I|L}[TA]TMV{[QN]|[E{I|L}]|[KN]} 10 -1 + 33.024 0.0 0.0 3.0704 3.0704 81.714 0.0 0.0 0.0 10.52256226852258 18.4199860606565 10.52256226852258 18.085660310946977 0 0.7887254899964358 0.0 0.0 0.3252574989159953 [QA]{I|L}[TA]TMV{[QN]|[E{I|L}]|[KN]};[QA]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WW{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{[NV]|[RG]}WW{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]TMV{[QN]|[E{I|L}]|[KN]} 3.0704;1.3889;1.1049;0.49761 -;-;-;- 85 1 1.501 37036.5 1.0 5537 5338 10873 HBL1_DMSO_200M_050219_1,10877 HBL1_DMSO_200M_050219_1,10877,AQISNFGLNI False False AQIKEMVEL 56.53267 538.787158191204 11722285.0 10873.0 ENSG00000165280|ENST00000358901|VCP;;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 6.432812849680583 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10878 56.534 56.0 1274000.0 25 0 118980.0 + 6249 DTNADKQLSF 10 112 569.7724812663439 1137.5304095994877 2 569.7726928591728 MULTI CID FTMS 0 0 0 10873 1035889.25 0.390289769330475 -2 0.1864089965820312 5 Unmodified _DTNADKQLSF_ ENSG00000163220|ENST00000368738|S100A9 83.27773906761396 0.014381580010361 3 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S{M(Oxidation (M))|F} 10 0 + 72.43 0.0 0.0 6.3673 6.3673 86.185 0.0 0.0 0.0 5.017302660547529 51.4613685516224 5.017302660547529 6.549471895720984 0 2.504432191740108 0.0 1.1549471895720984 0.6505149978319906 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S{M(Oxidation (M))|F};{[QS]|[NT]}DADKQ{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S{M(Oxidation (M))|F};[AG]SDADKQ{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NADK{I|L}QS{M(Oxidation (M))|F};{[QS]|[NT]}DADK[AG]{I|L}S{M(Oxidation (M))|F};{[QS]|[NT]}DADK{I|L}QS{M(Oxidation (M))|F};[AG]SDADK[AG]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S{M(Oxidation (M))|F} 6.3673;5.7916;5.5617;5.3015;5.2758;5.1788;4.9859;4.603;4.499;4.4733 +;-;-;-;-;-;-;-;-;- + 2123 1 1.501 58438.0 1.0 5538 5338 10873 HBL1_DMSO_200M_050219_1,10878 HBL1_DMSO_200M_050219_1,10878,DTNADKQLSF True True DTNADKQLSF 56.534105 569.772692859173 14562284.0 10873.0 ENSG00000163220|ENST00000368738|S100A9 7.982831637064616 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10879 56.542 436.0 664250.0 25 0 42580.0 + + 28601 AIQDEIRSV 9 222 515.2785361224439 1028.5425193116878 2 515.7803222537041 MULTI CID FTMS 0 0 0 10873 523510.40625 0.5245497359831336 -2 0.1864089965820312 6 Unmodified _PVAMQAARSV_ ENST00000504707.1_1_4:120981275-120987923:-|nuORF;ENSG00000164109|ENST00000296509|MAD2L1 16.149105407346934 0.5765757077271437 3 AQDE{I|L}RSV 8 -1 45.504 0.0 0.0 4.4241 0.0 0.0 112.07741064570833 0.0 112.07741064570833 0.0 24.042687672321463 0.0 0.0 0 0.0 0.0 1.040287727315686 0.6421590589602533 AQDE{I|L}RSV 4.4241 - 3204 + 1 1.501 223819.8 1.0 5539 5338 10873 HBL1_DMSO_200M_050219_1,10879 HBL1_DMSO_200M_050219_1,10879,PVAMQAARSV False False AIQDEIRSV 56.541872 515.780322253704 6156051.0 10873.0 ENST00000504707.1_1_4:120981275-120987923:-|nuORF;;ENSG00000164109|ENST00000296509|MAD2L1 5.23387622833252 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10880 56.543 66.0 724860.0 25 0 34265.0 + 25113 MPYQEIKNV 9 106 561.2869195927296 1120.5592862522592 2 561.2875244021416 MULTI CID FTMS 0 0 0 10873 553579.5 0.2166639155409964 -2 0.1864089965820312 7 Unmodified _MPYQEIKNV_ ENSG00000131504|ENST00000389054|DIAPH1;nc|ENSG00000131504|O60610-2|DIAPH1;nc|ENSG00000131504|O60610-3|DIAPH1 41.8396318013385 0.0653578398400075 3 MPY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KNV 9 0 + 48.61 0.0 0.0 4.338 4.338 83.997 0.0 0.0 0.0 21.954642426401563 10.462659351691528 10.462659351691528 13.015384402724592 0 0.5 1.154901959985743 0.0 1.066901560044258 + + MPY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KNV;MPY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KGGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[NS]AV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QE{I|L}{[QS]|[NT]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[NS][{I|L}V]A{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{[CT]|[{M(Oxidation (M))|F}G]}AV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]E{I|L}{[QS]|[NT]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{[CT]|[{M(Oxidation (M))|F}G]}[{I|L}V]A{[QV]|[N{I|L}]|[RA]|[KV]};[TA]{[ES]|[DT]|[{I|L}C]}E{I|L}{[QS]|[NT]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]{[CT]|[{M(Oxidation (M))|F}G]}AV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 4.338;3.1765;2.0519;1.758;1.5396;1.1799;0.93626;0.66762;0.45413;0.36204 +;-;-;-;-;-;-;-;-;- + 762 + 1 1.501 39703.9 1.0 5540 5338 10873 HBL1_DMSO_200M_050219_1,10880 HBL1_DMSO_200M_050219_1,10880,MPYQEIKNV True True MPYQEIKNV 56.543468 561.287524402142 17347218.0 10873.0 nc|ENSG00000131504|O60610-3|DIAPH1;;nc|ENSG00000131504|O60610-2|DIAPH1;;ENSG00000131504|ENST00000389054|DIAPH1 7.144401550292969 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10881 56.547 162.0 658810.0 25 0 31484.0 + 41506 VPNEHIMNV 9 159 526.7645795363343 1051.5146061394685 2 526.7635375857353 MULTI CID FTMS 0 0 0 10873 502256.65625 0.7563394352941176 1 -0.1411094665527343 8 Unmodified _VPNEHIMNV_ ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF 53.40400417844725 0.0329064971918313 3 VP[HQ]{I|L}DMNV 9 3 + 70.345 0.0 0.0 6.6899 6.6899 91.719 0.0 0.0 0.0 41.52004620061945 12.98332479720628 12.98332479720628 13.015384402724592 0 1.1989700043360187 1.2218487496163564 0.0 0.805462187404089 VP[HQ]{I|L}DMNV;VP[HQ]{I|L}DMGGV;VP[HQ]{I|L}DQC{I|L};V[{I|L}T]N{M(Oxidation (M))|F}DMNV;VP[HQ]{I|L}D[AG]C{I|L};V[{I|L}T]GG{M(Oxidation (M))|F}DMNV;VP[HQ]PN{M(Oxidation (M))|F}T{I|L};V[{I|L}T]N{M(Oxidation (M))|F}DMGGV;VP[HQ]{I|L}[WC(Carbamidomethyl (C))]{I|L};VP[W{M(Oxidation (M))|F}][YQ]NV 6.6899;5.4521;5.1085;4.9373;4.2328;4.0616;3.7573;3.6995;3.5463;3.4366 -;-;-;-;-;-;-;-;-;- 3244 + 1 1.501 90437.1 1.0 5541 5338 10873 HBL1_DMSO_200M_050219_1,10881 HBL1_DMSO_200M_050219_1,10881,VPNEHIMNV True True VPNEHIMNV 56.546666 526.763537585735 9886999.0 10873.0 nc|ENSG00000171634|Q12830|BPTF;;ENSG00000171634|ENST00000306378|BPTF;;nc|ENSG00000171634|Q12830-4|BPTF 6.556873480478923 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10882 56.555 465.0 414790.0 25 0 88225.0 + 31883 RTLPETLDPA 10 149 556.801165553666 1111.587778174132 2 556.8020507693291 MULTI CID FTMS 0 0 0 10873 441182.0 0.1387290398423606 -2 0.1864089965820312 9 Unmodified _RTLPETLDPA_ ENSG00000065518|ENST00000184266|NDUFB4;nc|ENSG00000065518|O95168-2|NDUFB4 45.739877483867886 0.1051543674217965 3 WD{I|L}TEPR 7 7 61.652 0.0 0.0 5.5463 0.0 0.0 0.0 211.1095827692016 211.1095827692016 42.47084901914185 0.0 0.0 0.0 0 1.0 0.0 1.0629529932484498 0.4247425010840047 WD{I|L}TEPR 5.5463 - 1820 + 1 1.501 153845.5 1.0 5542 5338 10873 HBL1_DMSO_200M_050219_1,10882 HBL1_DMSO_200M_050219_1,10882,RTLPETLDPA True True RTLPETLDPA 56.55492 556.802050769329 33790608.0 10873.0 ENSG00000065518|ENST00000184266|NDUFB4;;nc|ENSG00000065518|O95168-2|NDUFB4 7.0434980392456055 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10883 56.56 267.0 746380.0 25 0 57986.0 + 17331 KLVKEVIAV 9 170 499.83373804924224 997.6529231652844 2 499.8336059451103 MULTI CID FTMS 0 0 0 10873 413980.25 0.8538594444724465 -2 0.1864089965820312 10 Unmodified _KLVKEVIAV_ ENSG00000105379|ENST00000309244|ETFB;nc|ENSG00000105379|P38117-2|ETFB 83.42873516780209 0.0166860047644719 3 [{I|L}V]KEVK{I|L}AV 9 2 + 74.948 0.0 0.0 7.5125 7.5125 80.636 0.0 0.0 0.0 2.09733175997954 45.88020809863662 2.09733175997954 0.3653200891955919 0 1.055462187404089 1.3010299956639813 0.7887254899964358 0.5114393726401688 [{I|L}V]KEVK{I|L}AV;[{I|L}V]KEVKA{I|L}V;[K{I|L}]VEVK{I|L}AV;[K{I|L}]VEVKA{I|L}V;[{I|L}V]KEKV{I|L}AV;[{I|L}V]KEKVA{I|L}V;[K{I|L}]VEKV{I|L}AV;[K{I|L}]VEKVA{I|L}V;[{I|L}V]EKVK{I|L}AV;[{I|L}V]EKVKA{I|L}V 7.5125;7.4758;7.2397;7.2031;7.1339;7.0973;6.8612;6.8245;6.533;6.4964 -;-;-;-;-;-;-;-;-;- 6643 1 1.501 149501.8 1.0 5543 5338 10873 HBL1_DMSO_200M_050219_1,10883 HBL1_DMSO_200M_050219_1,10883,KLVKEVIAV True True KLVKEVIAV 56.559857 499.83360594511 3957776.0 10873.0 nc|ENSG00000105379|P38117-2|ETFB;;ENSG00000105379|ENST00000309244|ETFB 5.085742155710856 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10884 56.562 103.0 885720.0 25 0 118620.0 + 18144 KTPAEFAKL 9 131 502.7925186664888 1003.5704843997776 2 502.7924987673759 MULTI CID FTMS 0 0 0 10873 353410.75 0.8745778933589998 1 -0.1411094665527343 11 Unmodified _KTPAEFAKL_ ENSG00000013503|ENST00000228347|POLR3B;nc|ENSG00000013503|Q9NW08-2|POLR3B 23.78978130925829 0.2284941198415988 3 [PA]E{M(Oxidation (M))|F}AKT{I|L}K 9 4 + 38.809 0.0 0.0 3.867 3.867 82.412 0.0 0.0 0.0 14.805906063131722 21.3342602174744 14.805906063131722 12.041199826559254 0 0.218765315847925 1.154901959985743 0.0 0.0 [PA]E{M(Oxidation (M))|F}AKT{I|L}K;[PA]A{M(Oxidation (M))|F}EKT{I|L}K;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PAKT{I|L}K;{[TV]|[{I|L}S]}WEKT{I|L}K;[PA]E{M(Oxidation (M))|F}[KT]A{I|L}K;[PA]A{M(Oxidation (M))|F}TRT{I|L}K;[PA][YR]RT{I|L}K;{[TV]|[{I|L}S]}WTRT{I|L}K;[{I|L}A]{[DS]|[MA]|[CV]|TT}EKT{I|L}K;[PA]A{M(Oxidation (M))|F}T[VG]T{I|L}K 3.867;2.6672;2.1899;1.9409;1.8232;1.7164;1.0022;0.99002;0.92676;0.79882 -;-;-;-;-;-;-;-;-;- 739 1 1.501 72253.3 1.0 5544 5338 10873 HBL1_DMSO_200M_050219_1,10884 HBL1_DMSO_200M_050219_1,10884,KTPAEFAKL False True KTPAEFAKL 56.562049 502.792498767376 3726243.0 10873.0 ENSG00000013503|ENST00000228347|POLR3B;;nc|ENSG00000013503|Q9NW08-2|POLR3B 1.2845669239759443 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10885 56.574 679.0 554040.0 25 0 46240.0 + 41277 VPHLIDHQI 9 232 357.86982797016503 1070.587654510695 3 357.8695251345634 MULTI CID FTMS 0 0 0 10873 325879.03125 1.0 0 0.0 12 Unmodified _VPHLIDHQI_ ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8 71.92227651296345 0.0203558744033348 3 VPH{I|L}{I|L}D[HQ]{I|L} 9 0 + 58.748 0.0 0.0 5.4875 5.4875 77.676 0.0 0.0 0.0 33.73471003974638 7.712350453764046 7.712350453764046 2.201140738196017 0 0.2742275032520141 0.0 0.9802046884880936 1.615356566548286 + + VPH{I|L}{I|L}D[HQ]{I|L};VPH{I|L}EV[HQ]{I|L};VP{I|L}H{I|L}D[HQ]{I|L};V{I|L}PH{I|L}D[HQ]{I|L};VP{I|L}HEV[HQ]{I|L};V{I|L}PHEV[HQ]{I|L};VPH{I|L}{[CA]|SS}[YR]{I|L};V{I|L}EPHV[HQ]{I|L};VP{I|L}EHV[HQ]{I|L};V{I|L}PEHV[HQ]{I|L} 5.4875;5.2819;4.4516;4.2988;4.246;4.0932;3.8992;3.7309;3.4155;3.2627 +;-;-;-;-;-;-;-;-;- + 2520 + 1 1.501 323790.1 1.0 5545 5338 10873 HBL1_DMSO_200M_050219_1,10885 HBL1_DMSO_200M_050219_1,10885,VPHLIDHQI True True VPHLIDHQI 56.573845 357.869525134563 3050888.0 10873.0 nc|ENSG00000213079|Q9UPN6-2|SCAF8;;ENSG00000213079|ENST00000367178|SCAF8 2.649522582689921 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10886 56.578 243.0 462240.0 25 0 35940.0 + 10807 FYVASSRQL 9 128 535.7852029441054 1069.5558529550108 2 535.7858154177666 MULTI CID FTMS 0 0 0 10873 308440.90625 1.0 0 0.0 13 Unmodified _FYVASSRQL_ ENSG00000103222|ENST00000399410|ABCC1;nc|ENSG00000103222|P33527-2|ABCC1;nc|ENSG00000103222|P33527-3|ABCC1;nc|ENSG00000103222|P33527-4|ABCC1;nc|ENSG00000103222|P33527-5|ABCC1;nc|ENSG00000103222|P33527-6|ABCC1;nc|ENSG00000103222|P33527-7|ABCC1;nc|ENSG00000103222|P33527-8|ABCC1;nc|ENSG00000103222|P33527-9|ABCC1 60.07390631473393 0.0260411565414776 3 {M(Oxidation (M))|F}YVASSRQ{I|L} 9 0 + 54.208 0.0 0.0 5.0683 5.0683 78.583 0.0 0.0 0.0 3.5946274375014085 4.615005783267996 3.5946274375014085 3.5946274375014085 0 0.7742275032520141 0.0 0.6139829889124311 0.6203715150305281 + + {M(Oxidation (M))|F}YVASSRQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}[YR]{I|L}VYE;{M(Oxidation (M))|F}YVASSRAAV;{M(Oxidation (M))|F}YVASSR[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{M(Oxidation (M))|F}]{I|L}VYE;{M(Oxidation (M))|F}YV{I|L}[W{I|L}]MV;{M(Oxidation (M))|F}YV{I|L}[C(Carbamidomethyl (C))K]Q{I|L};{M(Oxidation (M))|F}YV{I|L}[KC]GQ{I|L};[{M(Oxidation (M))|F}T][W{I|L}]{I|L}VYE;{M(Oxidation (M))|F}YVVV{[ES]|[DT]|[{I|L}C]}EV 5.0683;4.7322;4.6368;3.9833;3.7722;3.3686;3.2325;3.1106;3.0339;2.8685 +;-;-;-;-;-;-;-;-;- + 851 + 1 1.501 90213.3 1.0 5546 5338 10873 HBL1_DMSO_200M_050219_1,10886 HBL1_DMSO_200M_050219_1,10886,FYVASSRQL True True FYVASSRQL 56.578397 535.785815417767 2508095.25 10873.0 nc|ENSG00000103222|P33527-2|ABCC1;;nc|ENSG00000103222|P33527-5|ABCC1;;nc|ENSG00000103222|P33527-3|ABCC1;;nc|ENSG00000103222|P33527-8|ABCC1;;nc|ENSG00000103222|P33527-4|ABCC1;;ENSG00000103222|ENST00000399410|ABCC1;;nc|ENSG00000103222|P33527-9|ABCC1;;nc|ENSG00000103222|P33527-6|ABCC1;;nc|ENSG00000103222|P33527-7|ABCC1 5.534211158752441 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10887 56.59 662.0 421210.0 25 0 52784.0 + 22023 LPPPPPPAM 9 207 458.7515933437354 915.4886337542708 2 458.7511474490166 MULTI CID FTMS 0 0 0 10873 280145.78125 0.0400282282559253 44 -3.859580993652344 14 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 3 [{I|L}P]PPPP 6 3 52.427 0.0 0.0 5.7266 0.0 0.0 0.0 314.11665238846075 314.11665238846075 35.436909460092 0.0 0.0 0.0 0 1.4802046884880935 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.7266 + + 734 1 1.501 212640.7 1.0 5547 5338 10873 HBL1_DMSO_200M_050219_1,10887 HBL1_DMSO_200M_050219_1,10887,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10888 56.604 797.0 290280.0 25 0 21401.0 + 43188 VYWVARKPM 9 191 383.8794477079348 1148.6165137240043 3 383.8791076540947 MULTI CID FTMS 0 0 0 10873 240813.703125 0.3586677259397573 5 -0.4292831420898437 15 Unmodified _VYWVARKPM_ ENSG00000137038|ENST00000358227|DMAC1;nc|ENSG00000137038|Q96GE9|DMAC1 19.361941925380144 0.3125782356748823 3 VYWV{M(Oxidation (M))|F}A 6 5 60.152 0.0 0.0 5.2369 0.0 0.0 0.0 380.2437838190063 380.2437838190063 44.03720958383822 0.0 0.0 0.0 0 0.25 2.0 0.0 0.0 VYWV{M(Oxidation (M))|F}A 5.2369 - 1085 + 1 1.501 192556.2 1.0 5548 5338 10873 HBL1_DMSO_200M_050219_1,10888 HBL1_DMSO_200M_050219_1,10888,VYWVARKPM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10889 56.619 800.0 599300.0 25 0 33322.0 + -1 TMHKPPLL 8 345 318.1804146470298 951.5194145412896 3 318.1798583865166 MULTI CID FTMS 0 0 0 10873 168553.6875 1.0 0 0.0 16 Oxidation (M) _TM(Oxidation (M))HKPPLL_ REV__ENST00000558981.5_1_14:68038444-68042282:+|nuORF;REV__nc|ENSG00000054690|Q9ULM0-2|PLEKHH1 19.256988751693697 0.6264283240490721 3 [{M(Oxidation (M))|F}T]HPP{I|L}K{I|L} 8 -1 + 42.126 0.0 0.0 4.4273 4.4273 76.289 0.0 0.0 0.0 5.484550065040281 3.484783490945304 3.484783490945304 3.484783490945304 0 1.1307196863200843 0.0 0.0 0.4857737871658818 [{M(Oxidation (M))|F}T]HPP{I|L}K{I|L};[{M(Oxidation (M))|F}T]HPP{I|L}{I|L}K;[{M(Oxidation (M))|F}T]{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K{I|L};[{M(Oxidation (M))|F}T]{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}K 4.4273;4.061;0.58183;0.2156 -;-;-;- 293 + 1 1.501 378539.8 0.7799999713897705 5549 5338 10873 HBL1_DMSO_200M_050219_1,10889 HBL1_DMSO_200M_050219_1,10889,TMHKPPLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10890 56.633 800.0 313370.0 25 0 14574.0 + 38640 RVWDAEHPGL 10 272 394.2417614142727 1179.703454843018 3 394.2415649294853 MULTI CID FTMS 0 0 0 10873 103389.921875 0.597184091348037 1 -0.1411094665527343 17 Unmodified _TTIKAFFPKK_ ENSG00000132182|ENST00000254508|NUP210 20.41453444215458 0.5050059513928961 3 TT{I|L}KY{I|L}WKK 9 4 + 73.282 0.0 0.0 6.2119 6.2119 91.496 0.0 0.0 0.0 55.12093372246268 9.9561744758825 9.9561744758825 22.03320062289812 0 0.3618329459719517 1.2218487496163564 0.4247425010840047 0.3054621874040891 TT{I|L}KY{I|L}WKK;TT{I|L}KY{I|L}[RK]GT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}{I|L}YK{I|L}[PS];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}{I|L}YK[VP]T 6.2119;4.3442;1.9538;1.5356 -;-;-;- 397 + 1 1.501 195720.7 0.699999988079071 5550 5338 10873 HBL1_DMSO_200M_050219_1,10890 HBL1_DMSO_200M_050219_1,10890,TTIKAFFPKK False False RVWDAEHPGL 56.632786 394.241564929485 266356.25 10873.0 ENSG00000132182|ENST00000254508|NUP210 1.1897646610935528 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10891 56.637 233.0 337020.0 25 0 29497.0 -1 VYIEHRLMM 9 108 403.2040423222214 1206.5902975668644 3 403.5378295779228 MULTI CID FTMS 0 0 0 10873 101775.53125 0.5230509055737281 -2 0.1864089965820312 18 Oxidation (M) _VYIEHRLM(Oxidation (M))M_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-2|MCM7 13.614867670302877 0.4681447649821485 3 Y{I|L}VEHC 6 -1 48.02 0.0 0.0 3.9798 0.0 0.0 0.0 459.2322786920532 459.2322786920532 35.6246936830415 0.0 0.0 0.0 0 0.1989700043360188 2.0 0.0 0.0 Y{I|L}VEHC 3.9798 - 171 + 1 1.501 64328.7 1.0 5551 5338 10873 HBL1_DMSO_200M_050219_1,10891 HBL1_DMSO_200M_050219_1,10891,VYIEHRLMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10892 56.652 800.0 374370.0 25 0 11752.0 + 21756 LPMKVAIR 8 305 309.86595806258424 926.5760447879528 3 310.2010375857353 MULTI CID FTMS 0 0 0 10873 108826.0078125 0.6688206182442642 5 -0.4292831420898437 19 Unmodified _LPMKVAIR_ ENSG00000160796|ENST00000450053|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 7.910154910731844 0.7763180056447161 3 {I|L}PMK 4 4 28.014 0.0 0.0 3.0234 0.0 0.0 0.0 454.28086267642817 454.28086267642817 19.94221170928563 0.0 0.0 0.0 0 0.0591430016092656 0.0 0.0 0.0 + {I|L}PMK 3.0234 + + 99 + 1 1.501 238236.9 0.6100000143051147 5552 5338 10873 HBL1_DMSO_200M_050219_1,10892 HBL1_DMSO_200M_050219_1,10892,LPMKVAIR False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10893 56.666 800.0 100520.0 25 0 6381.2 -1 NLQLCHGIEYQ 11 132 687.8260986208916 0 687.8260986208916 PEAK CID FTMS 0 0 0 -1 0 20 Carbamidomethyl (C) _NLQLC(Carbamidomethyl (C))HGIEYQ_ ENSG00000145423|ENST00000274063|SFRP2 13.042465956692816 0.4221659143281722 3 DA{I|L}PHP 6 -1 19.87 0.0 0.0 1.4465 0.0 0.0 387.078476699639 353.2198580377563 740.2983347373953 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DA{I|L}PHP 1.4465 - 159 + 1 1.501 61002.7 0.8999999761581421 5553 5338 10873 HBL1_DMSO_200M_050219_1,10893 HBL1_DMSO_200M_050219_1,10893,NLQLCHGIEYQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10895 56.67 1.8 35073000.0 25 0 3611900.0 + 4147 DAPHPPLKI 9 78 329.8590105895294 986.5552023687884 3 329.8591186404228 MULTI CID FTMS 0 0 0 10894 28854096.0 0.6672643519865791 1 -0.0434761047363281 1 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 25.399314129420983 0.2080152500878129 3 {[DA]|[EG]}PHP[{I|L}P]K{I|L} 9 0 + 45.881 0.0 0.0 4.6506 4.6506 87.277 0.0 0.0 0.0 34.7717530379002 2.1130373940974323 2.1130373940974323 45.88099678598198 0 0.3054621874040891 2.0 0.0 0.3494850021680094 + + {[DA]|[EG]}PHP[{I|L}P]K{I|L} 4.6506 + + 55 + 1 1.491 55832.4 1.0 5554 5339 10894 HBL1_DMSO_200M_050219_1,10895 HBL1_DMSO_200M_050219_1,10895,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10896 56.671 12.0 6587700.0 25 0 1593500.0 + 10247 FQRSAAYFL 9 95 368.194404519104 1101.5613841575118 3 368.1942016482353 MULTI CID FTMS 0 0 0 10894 4785709.5 0.2710191629994366 28 -2.260604858398437 2 Unmodified _FQRSAAYFL_ REV__ENSG00000178460|ENST00000422365|MCMDC2;REV__ENST00000428734.5_1_8:67786448-67831401:+|nuORF;REV__nc|ENSG00000178460|Q4G0Z9-2|MCMDC2;REV__nc|ENSG00000178460|Q4G0Z9-3|MCMDC2;REV__nc|ENSG00000178460|Q4G0Z9-4|MCMDC2 19.361941925380144 0.3125782356748823 3 KE[VS]EP{I|L}{M(Oxidation (M))|F} 8 -1 37.018 0.0 0.0 3.3605 0.0 0.0 154.07477004218907 0.0 154.07477004218907 0.0 13.882353118286233 0.0 0.0 0 0.0 0.0 0.3807196863200844 1.524227503252014 KE[VS]EP{I|L}{M(Oxidation (M))|F} 3.3605 - 582 1 1.491 68639.3 1.0 5555 5339 10894 HBL1_DMSO_200M_050219_1,10896 HBL1_DMSO_200M_050219_1,10896,FQRSAAYFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10897 56.673 15.0 3224400.0 25 0 362920.0 + 44987 YPSETFTRV 9 64 550.274518954315 1098.53448497543 2 550.2749511599541 MULTI CID FTMS 0 0 0 10894 4575930.5 0.3899090167233119 -3 0.3275184631347656 3 Unmodified _YPSETFTRV_ ENSG00000164109|ENST00000296509|MAD2L1;ENST00000511295.1_1_4:120986776-120987958:-|nuORF;nc|ENSG00000164109|Q13257-2|MAD2L1 28.49450938151212 0.1686335738423394 3 YPSET{M(Oxidation (M))|F} 6 3 74.513 0.0 0.0 6.783 0.0 0.0 0.0 371.2049349420532 371.2049349420532 49.63106892919541 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3807196863200844 0.0 + YPSET{M(Oxidation (M))|F} 6.783 + + 58 + 1 1.491 46552.0 1.0 5556 5339 10894 HBL1_DMSO_200M_050219_1,10897 HBL1_DMSO_200M_050219_1,10897,YPSETFTRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10898 56.674 13.0 2606500.0 25 0 394740.0 + 39859 VFIDKQTNL 9 59 539.3005928976531 1076.5866328621062 2 539.3009521365166 MULTI CID FTMS 0 0 0 10894 4117315.25 0.4826839404345394 -1 0.1411094665527343 4 Unmodified _VFIDKQTNL_ ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1 51.629811660486645 0.0367964933207742 3 [{M(Oxidation (M))|F}V]{I|L}DK[QT]N{I|L} 9 0 + 43.016 0.0 0.0 3.9956 3.9956 82.779 0.0 0.0 0.0 28.32293909222236 3.010592250701606 3.010592250701606 12.09544243948811 0 0.4247425010840047 0.0 0.3807196863200844 1.5629529932484498 + + [{M(Oxidation (M))|F}V]{I|L}DK[QT]N{I|L};[{M(Oxidation (M))|F}V]{I|L}DK[QT]GG{I|L} 3.9956;2.8721 +;- + 95 + 1 1.491 32433.3 1.0 5557 5339 10894 HBL1_DMSO_200M_050219_1,10898 HBL1_DMSO_200M_050219_1,10898,VFIDKQTNL True True VFIDKQTNL 56.673779 539.300952136517 27273442.0 10894.0 nc|ENSG00000048740|O95319-5|CELF2;;nc|ENSG00000149187|Q92879-6|CELF1;;ENSG00000048740|ENST00000633077|CELF2;;nc|ENSG00000149187|Q92879-4|CELF1;;nc|ENSG00000048740|O95319-3|CELF2;;nc|ENSG00000048740|O95319-4|CELF2;;nc|ENSG00000149187|Q92879|CELF1;;nc|ENSG00000048740|O95319|CELF2;;ENSG00000149187|ENST00000687097|CELF1;;nc|ENSG00000149187|Q92879-3|CELF1;;nc|ENSG00000149187|Q92879-5|CELF1;;nc|ENSG00000149187|Q92879-2|CELF1;;nc|ENSG00000048740|O95319-2|CELF2 5.9552351633707685 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10899 56.675 22.0 1968000.0 25 0 232550.0 + 3038 AVLDRMHSL 9 70 347.8552999368594 1040.5440704107782 3 347.8550903201103 MULTI CID FTMS 0 0 0 10894 2651084.25 0.9718462236945884 1 -0.0434761047363281 5 Unmodified _AVLDRMHSL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 34.10243960390752 0.1078313939113124 3 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}V 4 6 31.911 0.0 0.0 3.0668 0.0 0.0 0.0 621.2946377871158 621.2946377871158 13.7101498947667 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}V 3.0668 - 30 + 1 1.491 46084.6 1.0 5558 5339 10894 HBL1_DMSO_200M_050219_1,10899 HBL1_DMSO_200M_050219_1,10899,AVLDRMHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10900 56.676 22.0 5351300.0 25 0 984550.0 + 41687 VPRTSEIYV 9 100 532.2928424031489 1062.5711318730978 2 532.2929565310478 MULTI CID FTMS 0 0 0 10894 2413411.5 0.2869644857279427 -3 0.3275184631347656 6 Unmodified _VPRTSEIYV_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 21.53697664764585 0.2571576504437394 3 [Y{I|L}][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{I|L}YV 8 6 + 48.193 0.0 0.0 4.5355 4.5355 84.114 0.0 0.0 0.0 7.447274948966935 35.516609670558594 7.447274948966935 11.020599913279623 0 0.8807196863200843 1.3979400086720375 0.0 0.0 [Y{I|L}][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{I|L}YV;[Y{I|L}][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}Y{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}V]DD{I|L}YV;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}V]DDY{I|L}V 4.5355;3.4983;2.5471;1.5099 -;-;-;- 157 1 1.491 97792.1 1.0 5559 5339 10894 HBL1_DMSO_200M_050219_1,10900 HBL1_DMSO_200M_050219_1,10900,VPRTSEIYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10901 56.677 37.0 5202300.0 25 0 893570.0 -1 0 112 401.2531574295558 800.4917619259116 2 401.2529479861259 MULTI CID FTMS 0 0 0 10894 1839168.5 0.6884693171180409 1 -0.0434761047363281 7 3 PHPP{I|L}K{I|L} 7 -1 + 70.728 0.0 0.0 8.8356 8.8356 92.102 0.0 0.0 0.0 31.54901959985743 7.160033436348002 7.160033436348002 7.160033436348002 0 1.7491348669726232 1.5228787452803376 0.0 0.2302046884880938 PHPP{I|L}K{I|L};PHPP{I|L}{I|L}K 8.8356;7.9411 -;- 184 + 1 1.491 155426.4 1.0 5560 5339 10894 HBL1_DMSO_200M_050219_1,10901 HBL1_DMSO_200M_050219_1,10901, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10902 56.678 38.0 2393600.0 25 0 231620.0 + 5804 DPPYSRVI 8 101 473.7532497189813 945.4919465047626 2 473.7535888552666 MULTI CID FTMS 0 0 0 10894 1642611.0 0.3954194385531732 -7 0.6523513793945312 8 Unmodified _DPPYSRVI_ ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2 29.081581746732265 0.4323690340403521 3 DPPY[RV]S{I|L} 8 2 + 60.099 0.0 0.0 6.3564 6.3564 93.259 0.0 0.0 0.0 47.88032523080816 2.6760624017703094 2.6760624017703094 60.09881272697172 0 0.8494850021680094 2.0 0.0 0.0 DPPY[RV]S{I|L} 6.3564 - 116 + 1 1.491 75474.9 1.0 5561 5339 10894 HBL1_DMSO_200M_050219_1,10902 HBL1_DMSO_200M_050219_1,10902,DPPYSRVI False True DPPYSRVI 56.678494 473.753588855267 349970976.0 10894.0 nc|ENSG00000198961|O43164-2|PJA2;;ENSG00000198961|ENST00000361189|PJA2 1.227408806482951 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10903 56.68 29.0 1761300.0 25 0 99690.0 + 30650 RFPDGTNGL 9 85 488.7463658334003 975.4781787336008 2 488.7463561892509 MULTI CID FTMS 0 0 0 10894 1324310.0 0.5682664442764741 10 -0.926513671875 9 Unmodified _RFPDGTNGL_ ENSG00000164442|ENST00000367651|CITED2;nc|ENSG00000164442|Q99967-2|CITED2 31.26834338654808 0.1333407332142048 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTNG{I|L} 9 2 + 51.44 0.0 0.0 5.2734 5.2734 80.28 0.0 0.0 0.0 4.436974992327123 14.973024840566469 4.436974992327123 4.436974992327123 0 0.7887254899964358 1.3979400086720375 0.3252574989159953 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTNG{I|L};[R{M(Oxidation (M))|F}][DP]GTNG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTGGG{I|L};[R{M(Oxidation (M))|F}][DP]GTGGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GG{[SA]|[TG]}G{I|L};[R{M(Oxidation (M))|F}][DP]GG{[SA]|[TG]}G{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]N{[SA]|[TG]}G{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GG{[QS]|[NT]}{I|L};[R{M(Oxidation (M))|F}][DP]N{[SA]|[TG]}G{I|L};[R{M(Oxidation (M))|F}][DP]GG{[QS]|[NT]}{I|L} 5.2734;4.8185;4.3294;3.8745;3.6874;3.2325;3.0177;2.8138;2.5629;2.3589 -;+;-;-;-;-;-;-;-;- + 204 1 1.491 46017.3 1.0 5562 5339 10894 HBL1_DMSO_200M_050219_1,10903 HBL1_DMSO_200M_050219_1,10903,RFPDGTNGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10904 56.681 46.0 1117100.0 25 0 137510.0 + 44729 YPIMITTFV 9 71 542.7931421868918 1083.5717314405836 2 542.7930786013603 MULTI CID FTMS 0 0 0 10894 1011786.1875 0.0212946702214953 28 -2.260604858398437 10 Unmodified _YPIMITTFV_ REV__ENSG00000170456|ENST00000389082|DENND5B;REV__nc|ENSG00000170456|Q6ZUT9-2|DENND5B 11.494710602746466 0.5255349189887087 3 YPSS 4 -1 53.175 0.0 0.0 4.9074 0.0 0.0 0.0 646.3679293268186 646.3679293268186 46.18562527100117 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPSS 4.9074 - 23 + 1 1.491 48257.5 1.0 5563 5339 10894 HBL1_DMSO_200M_050219_1,10904 HBL1_DMSO_200M_050219_1,10904,YPIMITTFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10905 56.682 50.0 789870.0 25 0 95643.0 + -1 PLELCCQRSL 10 70 406.8702910615312 1217.5890437847936 3 406.8704101443291 MULTI CID FTMS 0 0 0 10894 987451.9375 0.4342429847379799 -1 0.1411094665527343 11 Carbamidomethyl (C) _PLELC(Carbamidomethyl (C))CQRSL_ REV__ENST00000555356.5_1_14:88852299-88881022:+|nuORF 10.898955630103616 0.6646681216928481 3 [{I|L}P]E{I|L}GS 6 -1 42.396 0.0 0.0 3.4819 0.0 0.0 0.0 618.2496431940061 618.2496431940061 17.457355646296477 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P]E{I|L}GS 3.4819 - 67 + 1 1.491 39484.0 1.0 5564 5339 10894 HBL1_DMSO_200M_050219_1,10905 HBL1_DMSO_200M_050219_1,10905,PLELCCQRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10906 56.684 88.0 714800.0 25 0 57372.0 -1 0 62 881.9127604281156 1761.810967923031 2 881.9130737185478 MULTI CID FTMS 0 0 0 10894 899940.6875 0.6702512732820607 -1 0.1411094665527343 12 3 {I|L}N[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 14 -1 74.378 0.0 0.0 4.2217 0.0 0.0 211.0963764875016 0.0 211.0963764875016 0.0 48.97176992505884 0.0 0.0 0 1.424742501084005 0.0 0.0 0.4247425010840047 {I|L}N[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.2217 - 602 1 1.491 49190.3 1.0 5565 5339 10894 HBL1_DMSO_200M_050219_1,10906 HBL1_DMSO_200M_050219_1,10906, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10907 56.686 79.0 727420.0 25 0 176370.0 + -1 LPRGGSVLV 9 67 449.2790059970128 896.5434590608255 2 449.2793151736259 MULTI CID FTMS 0 0 0 10894 813590.125 0.4250946152003866 -1 0.1411094665527343 13 Oxidation (M) _VLPM(Oxidation (M))PILV_ ENSG00000090339|ENST00000264832|ICAM1 32.45364647766026 0.3613649037604678 3 [{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[HG]|PP}{I|L}V 8 -1 + 34.671 0.0 0.0 3.8672 3.8672 84.606 0.0 0.0 0.0 2.6760624017703094 27.68114684785509 2.6760624017703094 34.67084689121528 0 0.8807196863200843 1.3979400086720375 0.0 0.0 [{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[HG]|PP}{I|L}V 3.8672 - 38 1 1.491 51483.9 1.0 5566 5339 10894 HBL1_DMSO_200M_050219_1,10907 HBL1_DMSO_200M_050219_1,10907,VLPMPILV False False LPRGGSVLV 56.686038 449.279315173626 9824706.0 10894.0 ENSG00000090339|ENST00000264832|ICAM1 -0.0543320178985595 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10908 56.688 71.0 581060.0 25 0 76607.0 + 26650 NYHWQETAY 9 78 606.2585412587222 1210.5025295842445 2 606.2596313357353 MULTI CID FTMS 0 0 0 10894 735548.6875 0.5691443311163902 -1 0.1411094665527343 14 Unmodified _NYHWQETAY_ ENSG00000184979|ENST00000215794|USP18;nc|ENSG00000184979|Q9UMW8-2|USP18 37.97399986684836 0.0865783450051559 3 [DP]{[DS]|[MA]|[CV]|TT}WQETAY 10 4 + 53.804 0.0 0.0 4.4448 4.4448 80.137 0.0 0.0 0.0 6.95931800153943 8.819459175083608 6.95931800153943 6.95931800153943 0 0.8935078169319297 0.7958800173440752 1.174742501084005 0.4247425010840047 [DP]{[DS]|[MA]|[CV]|TT}WQETAY;{[WN]|[YH]}NWQETAY;[DP]{[DS]|[MA]|[CV]|TT}W[AG]ETAY;[WH][YN]QETAY;{[WN]|[YH]}GGWQETAY;{[WN]|[YH]}NW[AG]ETAY;[WH][YN][AG]ETAY;[WH][KA]CCETAY;{[WN]|[YH]}GGW[AG]ETAY;[DP]{[DS]|[MA]|[CV]|TT}WQ[DP][HD] 4.4448;3.8698;3.3368;3.2677;3.1092;3.1092;2.507;2.507;2.3521;2.3252 -;-;-;-;-;-;-;-;-;- 128 1 1.491 35687.4 1.0 5567 5339 10894 HBL1_DMSO_200M_050219_1,10908 HBL1_DMSO_200M_050219_1,10908,NYHWQETAY True True NYHWQETAY 56.687713 606.259631335735 6872123.5 10894.0 ENSG00000184979|ENST00000215794|USP18;;nc|ENSG00000184979|Q9UMW8-2|USP18 9.231576919555664 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10909 56.69 94.0 671390.0 25 0 125240.0 + 1003 AFYEHAQTYY 10 77 646.7829582282759 1291.5513635233517 2 646.7832519412041 MULTI CID FTMS 0 0 0 10894 667584.25 0.5034770412333367 -1 0.1411094665527343 15 Unmodified _AFYEHAQTYY_ ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11 43.77239144664712 0.1177314611616471 3 A{M(Oxidation (M))|F}AQTYY 7 3 60.693 0.0 0.0 4.6993 0.0 0.0 429.1652699201188 0.0 429.1652699201188 0.0 40.40298891612736 0.0 0.0 0 0.9247425010840048 0.0 1.0 0.0 A{M(Oxidation (M))|F}AQTYY 4.6993 - 854 1 1.491 51619.8 1.0 5568 5339 10894 HBL1_DMSO_200M_050219_1,10909 HBL1_DMSO_200M_050219_1,10909,AFYEHAQTYY True True AFYEHAQTYY 56.689785 646.783251941204 16362614.0 10894.0 ENSG00000168538|ENST00000334690|TRAPPC11;;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;;ENST00000509857.5_1_4:184585182-184595983:+|nuORF 8.576942761739096 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10910 56.693 155.0 840900.0 25 0 49062.0 + 18214 KVFEHDSVEL 10 122 601.8060790763827 1201.5976052195654 2 601.8067504763603 MULTI CID FTMS 0 0 0 10894 602076.625 0.5569091360439348 -1 0.1411094665527343 16 Unmodified _KVFEHDSVEL_ ENSG00000139684|ENST00000378720|ESD;ENST00000495654.1_1_13:47359843-47367566:-|nuORF 63.22749603027936 0.0281198777558511 3 [VS]DHE{M(Oxidation (M))|F}KVE{I|L} 10 6 + 66.337 0.0 0.0 5.5208 5.5208 84.874 0.0 0.0 0.0 9.89297640623046 41.07142381143365 9.89297640623046 8.494850021680087 0 0.6549471895720984 0.8860566476931632 1.7218487496163564 0.3054621874040891 [VS]DHE{M(Oxidation (M))|F}KVE{I|L};[VS]DHE{M(Oxidation (M))|F}VKE{I|L};[HD]ESV{M(Oxidation (M))|F}KVE{I|L};K[KC]K{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}E{I|L};[VS]DHE{M(Oxidation (M))|F}KD{I|L}{I|L};[VS]DYYSKVE{I|L};[HD]E{M(Oxidation (M))|F}SVKVE{I|L};[HD]E{M(Oxidation (M))|F}VSKVE{I|L};[VS]DYYKSVE{I|L};{[YC]|[HE]}DSV{M(Oxidation (M))|F}KVE{I|L} 5.5208;4.8138;4.371;4.3614;4.2687;4.2438;4.2341;4.1534;4.1408;4.1205 -;-;-;-;-;-;-;-;-;- 2388 1 1.491 97883.6 1.0 5569 5339 10894 HBL1_DMSO_200M_050219_1,10910 HBL1_DMSO_200M_050219_1,10910,KVFEHDSVEL True True KVFEHDSVEL 56.692873 601.80675047636 3663161.0 10894.0 ENST00000495654.1_1_13:47359843-47367566:-|nuORF;;ENSG00000139684|ENST00000378720|ESD 5.884323120117188 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10911 56.697 192.0 484540.0 25 0 33991.0 43519 WWWWIWWQWW 10 75 874.9044782998504 1747.7944036665008 2 874.9055663943291 MULTI CID FTMS 0 0 0 10894 578268.8125 0.1387100249424054 10 -0.926513671875 17 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 3 [NP]{I|L}S[WH]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 13 + 84.836 0.0 0.0 4.8539 4.8539 81.189 0.0 0.0 0.0 11.650830338269458 63.38222205381598 11.650830338269458 6.690067809585756 0 0.9247425010840048 1.0969100130080565 0.2742275032520141 0.805462187404089 [NP]{I|L}S[WH]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}S[WH]QWN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}S[WH]QDAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}S[WH]QDAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}S[WH][AG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}S[WH][AG]WN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}S[WH]QWN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}S[WH]QWGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA[QP]QDAN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}S[WH]QDAN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.8539;4.4711;4.3372;4.3372;4.3372;3.9533;3.9533;3.9533;3.6512;3.4242 -;-;-;-;-;-;-;-;-;- 806 1 1.491 69147.2 1.0 5570 5339 10894 HBL1_DMSO_200M_050219_1,10911 HBL1_DMSO_200M_050219_1,10911,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 10912 56.7 186.0 739610.0 25 0 110030.0 + 12851 GVVGGSDFEKV 11 119 547.2801239644755 1092.5456949957509 2 547.2811157107353 MULTI CID FTMS 0 0 0 10894 609422.1875 0.5621667330068137 -1 0.1411094665527343 18 Unmodified _GVVGGSDFEKV_ ENSG00000140650|ENST00000268261|PMM2;ENST00000564030.5_1_16:8891706-8900277:+|nuORF;nc|ENSG00000140650|O15305-2|PMM2 46.0223103267499 0.1396584557920269 3 [VG]VGGSD{M(Oxidation (M))|F}EKV 11 0 + 78.216 0.0 0.0 7.1591 7.1591 92.197 0.0 0.0 0.0 38.33251034849137 9.76713401168996 9.76713401168996 10.07062321345802 0 1.055462187404089 1.5228787452803376 0.3807196863200844 0.2302046884880938 + + [VG]VGGSD{M(Oxidation (M))|F}EKV;[VG]VNSD{M(Oxidation (M))|F}EKV;[VG]RGSD{M(Oxidation (M))|F}EKV;[VG]VGG[WY]EKV;[VG]VGGSNNYKV;[VG]VGGSD[Q{I|L}]VY;[VG]VGGSNNKVY;[VG]VN[WY]EKV;[VG]VGGSD[Q{I|L}]YV;[VG]VGGSGGNYKV 7.1591;6.2373;5.911;5.6675;5.3663;5.2152;4.8631;4.7498;4.6811;4.5308 +;-;-;-;-;-;-;-;-;- + 736 + 1 1.491 117630.8 1.0 5571 5339 10894 HBL1_DMSO_200M_050219_1,10912 HBL1_DMSO_200M_050219_1,10912,GVVGGSDFEKV False True GVVGGSDFEKV 56.700175 547.281115710735 3265981.0 10894.0 ENST00000564030.5_1_16:8891706-8900277:+|nuORF;;nc|ENSG00000140650|O15305-2|PMM2;;ENSG00000140650|ENST00000268261|PMM2 7.85051155090332 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10913 56.702 91.0 1052600.0 25 0 109620.0 + 41163 VPASVVSRI 9 100 464.28442451859934 926.5542961039988 2 464.2841369509697 MULTI CID FTMS 0 0 0 10894 551822.1875 0.1538624102101644 -3 0.3275184631347656 19 Unmodified _VPASVVSRI_ ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1 55.50274090549119 0.0285720310785888 3 VPASVV{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 9 2 + 86.794 0.0 0.0 9.3673 9.3673 87.29 0.0 0.0 0.0 30.457574905606748 2.97891421449809 2.97891421449809 2.97891421449809 0 1.4916440611282626 1.3979400086720375 0.805462187404089 0.0 VPASVV{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};VPASV{I|L}RSV;VPASV{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]};VPA{I|L}[TA]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};VP{I|L}[SG]V{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};VPA{I|L}[VS]RSV;VP{I|L}[SG]{I|L}RSV;VP{I|L}A[TA]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};VPA{I|L}[VS]V{[QD]|[EN]|[WG]|[KD]|[RS]};VP{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 9.3673;9.0458;8.2026;6.4605;6.1494;6.139;5.8279;5.3523;5.2958;5.1681 -;-;-;-;-;-;-;-;-;- 344 + 1 1.491 81729.2 1.0 5572 5339 10894 HBL1_DMSO_200M_050219_1,10913 HBL1_DMSO_200M_050219_1,10913,VPASVVSRI True True VPASVVSRI 56.702169 464.28413695097 24159200.0 10894.0 nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;;ENSG00000131503|ENST00000360839|ANKHD1 3.793598016103109 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10914 56.709 407.0 637180.0 25 0 37236.0 + 21548 LPIWSICLGC 10 149 609.8018561530267 1217.5891593728534 2 609.8026000857353 MULTI CID FTMS 0 0 0 10894 514611.65625 0.3569452712498923 -1 0.1411094665527343 20 2 Carbamidomethyl (C) _LPIWSIC(Carbamidomethyl (C))LGC(Carbamidomethyl (C))_ ENSG00000124564|ENST00000397060|SLC17A3;nc|ENSG00000124564|O00476|SLC17A3 48.345845343767074 0.089859443182303 3 {I|L}P{I|L}GESG{I|L} 8 6 81.923 0.0 0.0 6.7283 0.0 0.0 0.0 448.14121423892817 448.14121423892817 49.98519197254048 0.0 0.0 0.0 0 1.3494850021680094 2.0 1.3539171939081172 0.0 {I|L}P{I|L}GESG{I|L} 6.7283 - 1335 + 1 1.491 187429.0 1.0 5573 5339 10894 HBL1_DMSO_200M_050219_1,10914 HBL1_DMSO_200M_050219_1,10914,LPIWSICLGC True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10916 56.714 15.0 7087100.0 25 0 1091200.0 + 29708 QPITPGPSI 9 94 455.2557361064309 908.4969192796618 2 455.2559081912041 MULTI CID FTMS 0 0 0 10915 8110311.5 0.3696615133607221 7 -0.6254959106445312 1 Unmodified _QPITPGPSI_ ENSG00000004487|ENST00000400181|KDM1A;ENST00000602503.1_1_1:23408727-23408946:+|nuORF;nc|ENSG00000004487|O60341|KDM1A 88.90359156742426 0.0153595091083554 3 [{I|L}T]TGPT 6 5 39.28 0.0 0.0 4.3236 0.0 0.0 0.0 335.1724923599931 335.1724923599931 14.206440717866212 0.0 0.0 0.0 0 0.7302046884880937 1.5228787452803376 1.535666875892183 0.0 [{I|L}T]TGPT 4.3236 - 613 1 1.491 87798.6 1.0 5574 5340 10915 HBL1_DMSO_200M_050219_1,10916 HBL1_DMSO_200M_050219_1,10916,QPITPGPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10917 56.715 20.0 8943500.0 25 0 1739400.0 + 44627 YPFKPPKV 8 102 325.86048683472575 974.5596311043772 3 325.8604614138603 MULTI CID FTMS 0 0 0 10915 5285148.0 0.0685204163601376 -27 2.269245147705078 2 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPPVK 8 2 + 56.99 0.0 0.0 5.8477 5.8477 76.948 0.0 0.0 0.0 25.90937307938958 0.9948500216800936 0.9948500216800936 0.9948500216800936 0 0.25 1.154901959985743 0.0 0.3129529932484499 YP{M(Oxidation (M))|F}KPPVK;YP{M(Oxidation (M))|F}KPPKV;YP{M(Oxidation (M))|F}KPVPK;YP{M(Oxidation (M))|F}KVPPK;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T]K[HS]VK;Y[{I|L}T]K[HS]KV;{[HG]|PP}KK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.8477;5.7456;5.4566;5.2759;1.476;1.4001;1.1759;1.0738;0.44646 -;+;-;-;-;-;-;-;- + 328 + 1 1.491 142716.4 1.0 5575 5340 10915 HBL1_DMSO_200M_050219_1,10917 HBL1_DMSO_200M_050219_1,10917,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10918 56.716 50.0 1097100.0 25 0 111780.0 + 22046 LPPPPPPHL 9 73 482.7845332676538 963.5545136021076 2 482.7847167849541 MULTI CID FTMS 0 0 0 10915 2535047.75 1.0 0 0.0 3 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 45.7499826716795 0.0496882803020414 3 {I|L}PPPPPP[H{I|L}] 9 0 + 81.872 0.0 0.0 8.4969 8.4969 96.969 0.0 0.0 0.0 74.8822875860511 7.147642715192504 7.147642715192504 22.21848749616356 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPPPPP[H{I|L}];{I|L}PPP[YK][H{I|L}];{I|L}PP[YK]P[H{I|L}];{I|L}P[YK]PP[H{I|L}];{I|L}[YK]PPP[H{I|L}];{I|L}[YK][YK][H{I|L}] 8.4969;6.191;6.191;6.191;3.6745;1.3757 +;-;-;-;-;- + 84 + 1 1.491 48125.7 1.0 5576 5340 10915 HBL1_DMSO_200M_050219_1,10918 HBL1_DMSO_200M_050219_1,10918,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10919 56.717 26.0 3959800.0 25 0 280900.0 + 44641 YPFKPPKV 8 113 488.2869567505858 974.5593605679716 2 488.2872497439384 MULTI CID FTMS 0 0 0 10915 2282354.75 0.0672580075274825 -25 2.0428924560546875 4 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 42.09456458481378 0.1992492688217789 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 62.726 0.0 0.0 6.4364 6.4364 93.021 0.0 0.0 0.0 26.83572700759367 3.4160332409989635 3.4160332409989635 38.890414413869685 0 0.8252574989159953 2.0 0.0 0.1803115997617927 + + YP{M(Oxidation (M))|F}KPPKV;{[VA]|[{I|L}G]}[R{I|L}]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[VA]|[{I|L}G]}{[VA]|[{I|L}G]}VK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[K{I|L}]TPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6.4364;2.4458;2.3121;1.9263;1.4485 +;-;-;-;- + 998 + 1 1.491 83637.5 1.0 5577 5340 10915 HBL1_DMSO_200M_050219_1,10919 HBL1_DMSO_200M_050219_1,10919,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10920 56.719 69.0 1120000.0 25 0 117320.0 + 3040 AVLDRMHSL 9 98 521.2786831652758 1040.5428133973514 2 521.2798950076103 MULTI CID FTMS 0 0 0 10915 1528645.125 0.9102917063535424 2 -0.1623802185058593 5 Unmodified _AVLDRMHSL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 71.70789743142352 0.0204387454931768 3 AV{I|L}DRMHS{I|L} 9 0 + 88.414 0.0 0.0 8.4969 8.4969 88.849 0.0 0.0 0.0 24.82184417851649 8.00406115044889 8.00406115044889 4.436974992327123 0 2.1237125054200234 2.0 1.4604093769761874 0.0 + + AV{I|L}DRMHS{I|L};AV{[QG]|[NA]}MKAHS{I|L};AV[C(Carbamidomethyl (C))R]KAHS{I|L};AV{I|L}DRMHTV;AV{[QG]|[NA]}MKAHTV;AV[C(Carbamidomethyl (C))R]KAHTV;AV[{M(Oxidation (M))|F}V][TP]AHS{I|L};{[VA]|[{I|L}G]}QQKMHS{I|L};AV[{M(Oxidation (M))|F}V][TP]AHTV;{[VA]|[{I|L}G]}{[QG]|[NA]}AKMHS{I|L} 8.4969;8.0705;7.9233;7.7277;7.3013;7.1541;6.5798;6.1115;5.8106;5.7549 +;-;-;-;-;-;-;-;-;- + 462 + 1 1.491 65479.8 1.0 5578 5340 10915 HBL1_DMSO_200M_050219_1,10920 HBL1_DMSO_200M_050219_1,10920,AVLDRMHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10921 56.721 59.0 504950.0 25 0 40040.0 28954 QDEFLQSGV 9 70 511.7447996406749 1021.4750463481496 2 511.7455932497978 MULTI CID FTMS 0 0 0 10915 1198639.5 1.0 0 0.0 6 Unmodified _QDEFLQSGV_ ENSG00000119844|ENST00000409933|AFTPH;ENST00000498706.5_1_2:64778608-64806757:+|nuORF;nc|ENSG00000119844|Q6ULP2-6|AFTPH;nc|ENSG00000119844|Q6ULP2-7|AFTPH;nc|ENSG00000119844|Q6ULP2-8|AFTPH;nc|ENSG00000119844|Q6ULP2-9|AFTPH 6.723162845929126 0.6799819581413107 3 {[QD]|[EN]|[WG]|[KD]|[RS]}AEW 5 7 19.833 0.0 0.0 1.9416 0.0 0.0 0.0 389.2190340631469 389.2190340631469 4.348331157524967 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}AEW 1.9416 - 32 + 1 1.491 29607.8 1.0 5579 5340 10915 HBL1_DMSO_200M_050219_1,10921 HBL1_DMSO_200M_050219_1,10921,QDEFLQSGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10922 56.722 68.0 776320.0 25 0 144910.0 42682 VTVVQSIGT 9 83 452.2608163932204 902.5070798532408 2 452.2610961794853 MULTI CID FTMS 0 0 0 10915 1102373.125 0.4636104353582229 -2 0.1845855712890625 7 Unmodified _VTVVQSIGT_ ENSG00000165478|ENST00000298251|HEPACAM;nc|ENSG00000165478|Q14CZ8-2|HEPACAM 22.736283301280096 0.2418982879461534 3 {[TV]|[{I|L}S]}VQVGT{[TV]|[{I|L}S]} 9 5 + 38.267 0.0 0.0 4.24 4.24 81.006 0.0 0.0 0.0 2.201140738196017 23.485221620214112 2.201140738196017 9.041521057952558 0 0.8935078169319297 2.0 0.0 0.0 {[TV]|[{I|L}S]}VQVGT{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}RRS{[RE]|[WV]};[KG]V{I|L}EGT{[TV]|[{I|L}S]};[KG]V{I|L}DAT{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}[KG]VGT{[TV]|[{I|L}S]};[KG]{[QN]|[E{I|L}]|[KN]}VGT{[TV]|[{I|L}S]};[KG]V{I|L}T{[DA]|[EG]}{[TV]|[{I|L}S]} 4.24;3.2382;2.4755;2.142;0.83884;0.59303;0.39792 -;-;-;-;-;-;- 335 1 1.491 46594.5 1.0 5580 5340 10915 HBL1_DMSO_200M_050219_1,10922 HBL1_DMSO_200M_050219_1,10922,VTVVQSIGT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10923 56.724 83.0 746740.0 25 0 47934.0 + 38371 TQTAVITRI 9 94 501.8007163356199 1001.5868797380398 2 501.8011352419853 MULTI CID FTMS 0 0 0 10915 978898.125 0.1865137878805055 -3 0.2996749877929687 8 Unmodified _TQTAVITRI_ ENSG00000101447|ENST00000619850|FAM83D;nc|ENSG00000101447|Q9H4H8-2|FAM83D 25.997395711884035 0.2004055669077203 3 [QT]TAV{I|L} 6 3 51.524 0.0 0.0 5.1443 0.0 0.0 0.0 385.2203768365844 385.2203768365844 32.79564464625093 0.0 0.0 0.0 0 1.0 0.8860566476931632 0.4247425010840047 0.0 + [QT]TAV{I|L} 5.1443 + + 211 + 1 1.491 53355.2 1.0 5581 5340 10915 HBL1_DMSO_200M_050219_1,10923 HBL1_DMSO_200M_050219_1,10923,TQTAVITRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10924 56.726 114.0 589420.0 25 0 89572.0 + 2829 AVADIKFSSA 10 103 504.7718728143112 1007.5291926954224 2 504.7722350955009 MULTI CID FTMS 0 0 0 10915 808506.125 1.0 0 0.0 9 Unmodified _AVADIKFSSA_ ENSG00000084092|ENST00000264230|NOA1 36.506200033944 0.1944608063770638 3 {[VA]|[{I|L}G]}AD{I|L}[C(Carbamidomethyl (C))H]{I|L}G 9 5 64.543 0.0 0.0 6.4061 0.0 0.0 0.0 68.05143152408436 68.05143152408436 20.17220322351953 0.0 0.0 0.0 0 1.1421590589602533 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}AD{I|L}[C(Carbamidomethyl (C))H]{I|L}G 6.4061 - 763 + 1 1.491 56055.2 1.0 5582 5340 10915 HBL1_DMSO_200M_050219_1,10924 HBL1_DMSO_200M_050219_1,10924,AVADIKFSSA False True AVADIKFSSA 56.726396 504.772235095501 4555589.5 10915.0 ENSG00000084092|ENST00000264230|NOA1 6.16248353322347 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10925 56.731 219.0 516830.0 25 0 68628.0 + 43838 YFHDRVASF 9 120 381.1868129410048 1140.5386094232144 3 381.1862975955009 MULTI CID FTMS 0 0 0 10915 659001.0625 1.0 0 0.0 10 Unmodified _YFHDRVASF_ ENSG00000164654|ENST00000340080|MIOS;nc|ENSG00000164654|Q9NXC5-2|MIOS 21.53697664764585 0.2571576504437394 3 {M(Oxidation (M))|F}H{I|L}YS{M(Oxidation (M))|F} 6 5 18.387 0.0 0.0 1.6121 0.0 0.0 328.14549526481443 0.0 328.14549526481443 0.0 6.604321685689925 0.0 0.0 0 0.6677353201839438 0.0 0.7887254899964358 0.0 {M(Oxidation (M))|F}H{I|L}YS{M(Oxidation (M))|F} 1.6121 - 182 + 1 1.491 94384.8 1.0 5583 5340 10915 HBL1_DMSO_200M_050219_1,10925 HBL1_DMSO_200M_050219_1,10925,YFHDRVASF False True YFHDRVASF 56.730527 381.186297595501 2699784.75 10915.0 nc|ENSG00000164654|Q9NXC5-2|MIOS;;ENSG00000164654|ENST00000340080|MIOS 3.897932370503744 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10926 56.734 198.0 796220.0 25 0 48691.0 -1 VTCMSNPFT 9 174 536.7266485940588 1071.4387442549175 2 536.7280761599541 MULTI CID FTMS 0 0 0 10915 569805.625 0.8534957800270403 -2 0.1845855712890625 11 Carbamidomethyl (C),Oxidation (M) _VTC(Carbamidomethyl (C))M(Oxidation (M))SNPFT_ ENST00000511884.6_2_4:31144591-31144774:+|nuORF 20.453626601364224 0.2830276176381075 3 [QT]T 3 -1 19.794 0.0 0.0 1.8474 0.0 0.0 0.0 738.2619918957956 738.2619918957956 1.5925685452880636 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.3054621874040891 0.2302046884880938 [QT]T 1.8474 - 824 1 1.491 127898.7 1.0 5584 5340 10915 HBL1_DMSO_200M_050219_1,10926 HBL1_DMSO_200M_050219_1,10926,VTCMSNPFT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10927 56.738 216.0 437920.0 25 0 81589.0 + 19072 LDRGALII 8 109 435.7739847491253 0 435.7739745974541 PEAK CID FTMS 0 0 0 10915 544758.875 0.592544234446817 -3 0.2996749877929687 12 Unmodified _LDRGALII_ REV__ENSG00000152670|ENST00000505374|DDX4;REV__nc|ENSG00000152670|Q9NQI0-2|DDX4;REV__nc|ENSG00000152670|Q9NQI0-3|DDX4;REV__nc|ENSG00000152670|Q9NQI0-4|DDX4 36.12702656103203 0.1753113530223663 3 {I|L}{I|L}Q 3 -1 20.049 0.0 0.0 2.3058 0.0 0.0 131.096479164463 381.1905001276001 512.286979292063 0.0 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.3494850021680094 {I|L}{I|L}Q 2.3058 - 120 + 1 1.491 79239.2 1.0 5585 5340 10915 HBL1_DMSO_200M_050219_1,10927 HBL1_DMSO_200M_050219_1,10927,LDRGALII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10928 56.742 167.0 367740.0 25 0 32414.0 + 25545 NESDRSPIGNG 11 96 573.2627487274895 1144.5109445217788 2 573.2651244997978 MULTI CID FTMS 0 0 0 10915 519038.40625 1.0 0 0.0 13 Unmodified _NESDRSPIGNG_ REV__ENSG00000176542|ENST00000316407|USF3 10.799506525563784 0.8105043987015127 3 {[QD]|[EN]|[WG]|[KD]|[RS]}SV{M(Oxidation (M))|F}VET 8 -1 39.703 0.0 0.0 3.469 0.0 0.0 0.0 236.1045321100219 236.1045321100219 15.238956344972934 0.0 0.0 0.0 0 0.0 0.0 1.110924374808178 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}SV{M(Oxidation (M))|F}VET 3.469 - 397 + 1 1.491 51782.8 1.0 5586 5340 10915 HBL1_DMSO_200M_050219_1,10928 HBL1_DMSO_200M_050219_1,10928,NESDRSPIGNG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10929 56.746 226.0 548920.0 25 0 70750.0 + 44503 YPATEHRDLLV 11 124 438.5665168176525 1312.6777210531577 3 438.5667297244072 MULTI CID FTMS 0 0 0 10915 484848.40625 1.0 0 0.0 14 Unmodified _YPATEHRDLLV_ ENSG00000138180|ENST00000371485|CEP55 31.44599026986405 0.3538411720360032 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATVP[YQ]{I|L}VY 11 6 + 55.286 0.0 0.0 4.2117 4.2117 78.211 0.0 0.0 0.0 1.6925526319546336 22.187653158479264 1.6925526319546336 5.752574989159953 0 0.9489700043360187 2.0 0.2742275032520141 0.2887254899964357 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATVP[YQ]{I|L}VY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATV[YQ]P{I|L}VY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATV[YG]AP{I|L}VY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATVP[YQ]Y{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[RD]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}VY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATVP[HV]APVY;[PA]YTVP[YQ]{I|L}VY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATV[YQ]PY{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[R{I|L}]CC{I|L}{I|L}VY;[PA]TYVP[YQ]{I|L}VY 4.2117;3.7735;3.6937;3.6554;3.5884;3.4305;3.3711;3.2172;3.1739;3.1642 -;-;-;-;-;-;-;-;-;- 3544 1 1.491 103451.3 1.0 5587 5340 10915 HBL1_DMSO_200M_050219_1,10929 HBL1_DMSO_200M_050219_1,10929,YPATEHRDLLV False True YPATEHRDLLV 56.745958 438.566729724407 5029320.5 10915.0 ENSG00000138180|ENST00000371485|CEP55 6.70356559753418 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10930 56.748 104.0 988950.0 25 0 179750.0 + 27273 PHGDKMWTV 9 95 357.50684227020884 1069.4986974108265 3 357.5064880251884 MULTI CID FTMS 0 0 0 10915 482622.34375 1.0 0 0.0 15 Unmodified _PHGDKMWTV_ REV__ENSG00000143341|ENST00000271588|HMCN1;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1 5.731851221503515 0.7145881442174411 3 V 1 -1 13.099 0.0 0.0 1.2248 0.0 0.0 952.4191589970554 0.0 952.4191589970554 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2248 + + 46 + 1 1.491 92555.5 1.0 5588 5340 10915 HBL1_DMSO_200M_050219_1,10930 HBL1_DMSO_200M_050219_1,10930,PHGDKMWTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10931 56.754 304.0 620520.0 25 0 72393.0 + 21000 LNRPLPKL 8 194 317.5431911443037 949.6077440331112 3 317.5430175662041 MULTI CID FTMS 0 0 0 10915 480079.40625 0.4209923417278548 -6 0.5152244567871094 16 Unmodified _LNRPLPKL_ REV__ENST00000552109.5_1_12:42554393-42631425:-|nuORF 34.40172386719151 0.3279500639400574 3 {I|L}PNR{I|L}PK{I|L} 8 -1 + 37.311 0.0 0.0 3.9291 3.9291 81.595 0.0 0.0 0.0 24.20738039310113 6.163282261788872 6.163282261788872 9.262137858390812 0 0.6022338482433752 0.7958800173440752 0.0 0.0 {I|L}PNR{I|L}PK{I|L};{I|L}PGGR{I|L}PK{I|L};{I|L}PNR{I|L}{I|L}[KP];{I|L}[RN]P{I|L}PK{I|L};{I|L}P{I|L}[RN]PK{I|L};{I|L}{I|L}P[RN]PK{I|L};{I|L}PGGR{I|L}{I|L}[KP];{I|L}[RN]P{I|L}{I|L}[KP];{I|L}P{I|L}[RN]{I|L}[KP];{I|L}{I|L}P[RN]{I|L}[KP] 3.9291;2.9538;2.457;2.3835;2.2957;1.5353;1.4817;0.91142;0.82355;0.063211 -;-;-;+;-;-;-;-;-;- + 280 + 1 1.491 151333.9 1.0 5589 5340 10915 HBL1_DMSO_200M_050219_1,10931 HBL1_DMSO_200M_050219_1,10931,LNRPLPKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10932 56.758 249.0 733120.0 25 0 96101.0 + 2939 AVHEDIVAV 9 139 476.7585614522664 951.5025699713328 2 476.7586242556572 MULTI CID FTMS 0 0 0 10915 446753.78125 0.155568317069748 -3 0.2996749877929687 17 Unmodified _AVHEDIVAV_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 60.38955033654506 0.025866396858536 3 {[VA]|[{I|L}G]}HED{I|L}VAV 9 0 + 75.601 0.0 0.0 7.9454 7.9454 93.991 0.0 0.0 0.0 9.916440611282624 14.09256854528806 9.916440611282624 9.771212547196626 0 0.9247425010840048 1.3979400086720375 0.7302046884880937 0.0 + + {[VA]|[{I|L}G]}HED{I|L}VAV;{[VA]|[{I|L}G]}HED{I|L}AVV;{[VA]|[{I|L}G]}HEDV{I|L}AV;{[YC]|[HE]}D{I|L}G{I|L}VAV;{[VA]|[{I|L}G]}HEEVVAV;{[VA]|[{I|L}G]}HED{I|L}G{I|L}V;{[YC]|[HE]}DVA{I|L}VAV;{[YC]|[HE]}D{I|L}VAVAV;{[YC]|[HE]}D{I|L}G{I|L}AVV;{[YC]|[HE]}D{I|L}GV{I|L}AV 7.9454;6.9185;6.9125;6.9032;6.8435;6.7872;6.2705;6.0345;5.8763;5.8703 +;-;-;-;-;-;-;-;-;- + 4527 1 1.491 141836.7 1.0 5590 5340 10915 HBL1_DMSO_200M_050219_1,10932 HBL1_DMSO_200M_050219_1,10932,AVHEDIVAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10933 56.767 495.0 193270.0 25 0 23066.0 -1 SFEVYCDMETM 11 112 714.2609391180919 1426.5073253029836 2 714.2624389529228 MULTI CID FTMS 0 0 0 10915 421915.9375 1.0 0 0.0 18 Carbamidomethyl (C),Oxidation (M) _SFEVYC(Carbamidomethyl (C))DM(Oxidation (M))ETM_ ENSG00000127951|ENST00000248598|FGL2 1.3295316138638542 0.8688751186870782 3 YMDASY 6 -1 39.315 0.0 0.0 2.7561 0.0 0.0 320.1537982467294 373.0644625299438 693.2182607766732 0.0 0.0 0.0 0.0 0 0.0 0.0 1.055462187404089 0.0 YMDASY 2.7561 - 156 + 1 1.491 72287.1 1.0 5591 5340 10915 HBL1_DMSO_200M_050219_1,10933 HBL1_DMSO_200M_050219_1,10933,SFEVYCDMETM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10934 56.778 645.0 178400.0 25 0 41648.0 -1 0 52 1134.8136299173502 3401.419060352251 3 1135.482714831829 MULTI CID FTMS 0 0 0 10915 386351.03125 0.6960722514222116 -1 0.0434761047363281 19 3 GY[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}G 6 -1 15.406 0.0 0.0 0.45293 0.0 0.0 1254.4296848869606 1396.7019925444326 2651.131677431393 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GY[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}G 0.45293 - 47 + 1 1.491 100066.5 1.0 5592 5340 10915 HBL1_DMSO_200M_050219_1,10934 HBL1_DMSO_200M_050219_1,10934, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10935 56.789 519.0 251190.0 25 0 11062.0 41102 VNLDDYNIHVI 11 139 657.8362576971668 1313.6579624611336 2 657.8376953005791 MULTI CID FTMS 0 0 0 10915 415638.3125 0.1929489877785093 3 -0.2446975708007812 20 Unmodified _VNLDDYNIHVI_ ENSG00000066933|ENST00000356056|MYO9A;nc|ENSG00000066933|B2RTY4-2|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A;nc|ENSG00000066933|B2RTY4-5|MYO9A 23.78978130925829 0.5336113198261219 3 VDERWA 6 9 47.785 0.0 0.0 3.6375 0.0 0.0 213.11010211139848 341.1960543268188 554.3061564382173 0.0 0.0 0.0 0.0 0 1.885151878060192 0.0 0.0 0.3807196863200844 VDERWA 3.6375 - 1234 + 1 1.491 96028.1 1.0 5593 5340 10915 HBL1_DMSO_200M_050219_1,10935 HBL1_DMSO_200M_050219_1,10935,VNLDDYNIHVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10937 56.801 508.0 249890.0 25 0 27496.0 45743 YYINLCQKI 9 169 579.3054599812413 1156.5963670292824 2 579.3021728396416 MULTI CID FTMS 0 0 0 10936 115968.0078125 0.3516293495933495 1 -0.08319091796875 1 Unmodified _YYINLCQKI_ ENSG00000197081|ENST00000356956|IGF2R 36.04419817259434 0.0971720506436186 3 YYQ{I|L} 4 5 61.983 0.0 0.0 5.359 0.0 0.0 0.0 586.2968233697874 586.2968233697874 38.37218653431943 0.0 0.0 0.0 0 0.75 2.0 0.0 0.7059771852360797 YYQ{I|L} 5.359 - 912 + 1 1.488 97677.7 1.0 5594 5341 10936 HBL1_DMSO_200M_050219_1,10937 HBL1_DMSO_200M_050219_1,10937,YYINLCQKI True False YYQIRSSQL 56.800956 579.302172839642 1698973.125 10936.0 ENST00000405068.3_1_17:74090453-74099797:-|nuORF;;nc|ENSG00000182473|Q9UPT5|EXOC7;;nc|ENSG00000182473|Q9UPT5-2|EXOC7;;nc|ENSG00000182473|Q9UPT5-4|EXOC7;;nc|ENSG00000182473|Q9UPT5-6|EXOC7;;ENSG00000182473|ENST00000589210|EXOC7;;nc|ENSG00000182473|Q9UPT5-5|EXOC7 4.845507939656575 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10938 56.802 4.9 12384000.0 25 0 1268700.0 + 41185 VPDTSRIYV 9 76 525.2851565995707 1048.5557602659412 2 525.2860595583916 MULTI CID FTMS 0 0 0 10936 5010501.0 0.4485121091531721 -2 0.1226654052734375 2 Unmodified _VPDTSRIYV_ ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT 36.506200033944 0.094635877243972 3 VPDT[TP]A[H{I|L}]V 10 4 + 59.914 0.0 0.0 5.7139 5.7139 83.418 0.0 0.0 0.0 31.819495059645103 5.674100046527357 5.674100046527357 6.020599913279625 0 0.75 1.154901959985743 0.75 0.0 VPDT[TP]A[H{I|L}]V;VPD[{I|L}A]DA[H{I|L}]V;VPDT[TP]A[HV]{I|L};VPD[KS]{[QN]|[E{I|L}]|[KN]}YV;VPD[{I|L}A]AD[H{I|L}]V;VPD[{I|L}A]DA[HV]{I|L};VPD[{I|L}A]AD[HV]{I|L};VPD[RV][YT]TV;VP[W{I|L}]A[YT]TV;VPD[RV][YT]S{I|L} 5.7139;5.1398;5.1078;5.0884;4.8527;4.5336;4.2465;4.1809;3.6067;3.5748 -;-;-;-;-;-;-;-;-;- 440 + 1 1.488 56733.9 1.0 5595 5341 10936 HBL1_DMSO_200M_050219_1,10938 HBL1_DMSO_200M_050219_1,10938,VPDTSRIYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10939 56.803 23.0 3711800.0 25 0 832890.0 + 3802 DAIITKASI 9 93 466.2767962521489 930.539039571098 2 466.2766296267509 MULTI CID FTMS 0 0 0 10936 1618141.125 0.3516838383747277 -2 0.1226654052734375 3 Unmodified _DAIITKASI_ ENSG00000124422|ENST00000261497|USP22;nc|ENSG00000124422|Q9UPT9-2|USP22 38.17557092003332 0.0854718145212029 3 {[DA]|[EG]}{I|L}{I|L}T[KA]S{I|L} 9 0 + 62.303 0.0 0.0 6.6953 6.6953 93.278 0.0 0.0 0.0 16.11355522219612 2.3418248469008134 2.3418248469008134 25.13096751239879 0 0.9247425010840048 2.0 0.8494850021680094 0.0 + + {[DA]|[EG]}{I|L}{I|L}T[KA]S{I|L};W{I|L}{I|L}{I|L}HH{I|L} 6.6953;3.9946 +;- + 313 + 1 1.488 68472.6 1.0 5596 5341 10936 HBL1_DMSO_200M_050219_1,10939 HBL1_DMSO_200M_050219_1,10939,DAIITKASI True True DAIITKASI 56.803314 466.2772 30351842.0 10936.0 ENSG00000124422|ENST00000261497|USP22;;nc|ENSG00000124422|Q9UPT9-2|USP22 3.145144065221151 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10940 56.804 38.0 1091000.0 25 0 120690.0 + 43005 VVYADIKTV 9 62 504.2920185622128 1006.5694841912256 2 504.2922851443291 MULTI CID FTMS 0 0 0 10936 574897.5 0.3087836548590467 -2 0.1226654052734375 4 Unmodified _VVYADIKTV_ nc|ENSG00000293488|Q8IZS7|CLECL1P 24.99096001346401 0.2132109383330889 3 VVYAD{I|L}KTV 9 0 + 52.361 0.0 0.0 5.2019 5.2019 89.16 0.0 0.0 0.0 30.678732196748584 8.984032236941601 8.984032236941601 47.97814517121274 0 0.4247425010840047 2.0 0.2742275032520141 0.0 + + VVYAD{I|L}KTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[TV]|[{I|L}S]}[RV][W{I|L}] 5.2019;0.43544 +;- + 133 + 1 1.488 38690.3 1.0 5597 5341 10936 HBL1_DMSO_200M_050219_1,10940 HBL1_DMSO_200M_050219_1,10940,VVYADIKTV False True VVYADIKTV 56.804493 504.292285144329 11188149.0 10936.0 nc|ENSG00000293488|Q8IZS7|CLECL1P 6.463263511657715 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 10941 56.806 71.0 720340.0 25 0 66174.0 + 4260 DAPVALVVH 9 78 460.7636648072526 919.5127766813052 2 460.7637817263603 MULTI CID FTMS 0 0 0 10936 513592.84375 0.3791538820719763 -1 0.0791893005371093 5 Unmodified _DAPVALVVH_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 42.96799951952854 0.0591636306142405 3 {[DA]|[EG]}PVA{I|L}VVH 9 0 + 67.959 0.0 0.0 7.3908 7.3908 93.529 0.0 0.0 0.0 22.37643016799588 12.552725051033065 12.552725051033065 12.552725051033065 0 0.2887254899964357 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}PVA{I|L}VVH;{[DA]|[EG]}PVA{I|L}VHV 7.3908;6.0256 +;- + 129 + 1 1.488 41729.6 1.0 5598 5341 10936 HBL1_DMSO_200M_050219_1,10941 HBL1_DMSO_200M_050219_1,10941,DAPVALVVH True True DAPVALVVH 56.806158 460.76378172636 8068351.0 10936.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 8.539092381795248 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10942 56.807 35.0 1383100.0 25 0 145250.0 + 2415 AQQGEVMRL 9 87 516.2682300472426 1030.521907161285 2 516.2690917849541 MULTI CID FTMS 0 0 0 10936 533385.5625 1.0 0 0.0 6 Unmodified _AQQGEVMRL_ ENSG00000124571|ENST00000265351|XPO5 13.042465956692816 0.4836390050082244 3 SSY[PA] 5 9 19.253 0.0 0.0 1.8682 0.0 0.0 507.2802906720719 0.0 507.2802906720719 0.0 -0.9370405245622492 -0.9370405245622492 0.0 0 0.3054621874040891 0.0 0.0 0.0 SSY[PA] 1.8682 - 48 1 1.488 43062.5 1.0 5599 5341 10936 HBL1_DMSO_200M_050219_1,10942 HBL1_DMSO_200M_050219_1,10942,AQQGEVMRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10943 56.81 136.0 503740.0 25 0 59717.0 + 14571 IHSQIEEFE 9 122 377.8475293189893 1130.520758557168 3 377.8474914431572 MULTI CID FTMS 0 0 0 10936 498493.53125 0.6217072899243605 -1 0.0791893005371093 7 Unmodified _IHSQIEEFE_ REV__ENSG00000183914|ENST00000572933|DNAH2;REV__nc|ENSG00000183914|Q9P225-2|DNAH2 26.88365393820708 0.1891292719743517 3 [H{I|L}]SQ{I|L}C 6 -1 34.231 0.0 0.0 3.0279 0.0 0.0 0.0 446.1676451140617 446.1676451140617 19.6265249738142 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.8494850021680094 [H{I|L}]SQ{I|L}C 3.0279 - 540 1 1.488 61069.6 1.0 5600 5341 10936 HBL1_DMSO_200M_050219_1,10943 HBL1_DMSO_200M_050219_1,10943,IHSQIEEFE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10944 56.812 81.0 453340.0 25 0 66585.0 + 3906 DALDVANKIG 10 76 508.2747219047017 1014.5348908762036 2 508.2747070193291 MULTI CID FTMS 0 0 0 10936 485569.375 0.4660827466637071 -2 0.1226654052734375 8 Unmodified _DALDVANKIG_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;ENST00000491601.1_1_17:38595721-38595772:-|nuORF 24.99096001346401 0.4071966087057876 3 {[DA]|[EG]}{I|L}D 4 6 41.682 0.0 0.0 4.1085 0.0 0.0 0.0 597.3366846596597 597.3366846596597 14.255828144472034 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}{I|L}D 4.1085 + + 161 1 1.488 35655.3 1.0 5601 5341 10936 HBL1_DMSO_200M_050219_1,10944 HBL1_DMSO_200M_050219_1,10944,DALDVANKIG False True DALDVANKIG 56.811906 508.274707019329 11949868.0 10936.0 ENST00000471152.1_2_3:161146917-161147007:-|nuORF;;ENSG00000198242|ENST00000422514|RPL23A;;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;;ENST00000491601.1_1_17:38595721-38595772:-|nuORF;;ENST00000467573.1_1_21:40499576-40499963:+|nuORF 5.921639124552409 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10945 56.815 178.0 630040.0 25 0 73506.0 + -1 GLCSSSNSSV 10 144 499.215493778567 996.416434623934 2 499.2152892947197 MULTI CID FTMS 0 0 0 10936 419346.0625 0.4711966939513763 -1 0.0791893005371093 9 Carbamidomethyl (C) _GLC(Carbamidomethyl (C))SSSNSSV_ REV__ENST00000473073.1_1_3:136045962-136048865:+|nuORF 20.453626601364224 0.5043500229302764 3 [{I|L}T]M 3 -1 35.8 0.0 0.0 3.5929 0.0 0.0 0.0 648.2214327530934 648.2214327530934 21.61742519438163 0.0 0.0 0.0 0 0.805462187404089 2.0 0.1803115997617927 0.0 [{I|L}T]M 3.5929 - 303 1 1.488 89377.2 1.0 5602 5341 10936 HBL1_DMSO_200M_050219_1,10945 HBL1_DMSO_200M_050219_1,10945,GLCSSSNSSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10946 56.818 128.0 465590.0 25 0 34565.0 + -1 AQIFCHQDL 9 100 566.2671381798674 1130.5197234265347 2 566.2675048708916 MULTI CID FTMS 0 0 0 10936 422349.75 0.4652008864816505 -1 0.0791893005371093 10 Carbamidomethyl (C) _AQIFC(Carbamidomethyl (C))HQDL_ REV__ENST00000403969.5_1_7:5024574-5036351:+|nuORF;REV__ENST00000404006.5_1_7:5024574-5028783:+|nuORF;REV__ENST00000407184.5_2_7:5024574-5087708:+|nuORF;REV__ENST00000493407.5_1_7:5024574-5026202:+|nuORF 25.399314129420983 0.2080152500878129 3 [QA]{I|L}S{[YC]|[HE]}QS 8 -1 37.718 0.0 0.0 3.3363 0.0 0.0 0.0 247.12067590885 247.12067590885 14.11211764228183 0.0 0.0 0.0 0 0.7887254899964358 0.6989700043360187 0.7614393726401688 0.4247425010840047 [QA]{I|L}S{[YC]|[HE]}QS 3.3363 - 563 + 1 1.488 50282.2 1.0 5603 5341 10936 HBL1_DMSO_200M_050219_1,10946 HBL1_DMSO_200M_050219_1,10946,AQIFCHQDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10947 56.826 466.0 550640.0 25 0 50638.0 45249 YSCPYCSKR 9 206 553.7406959658325 1105.466838998465 2 553.7413818240166 MULTI CID FTMS 0 0 0 10936 371950.15625 0.5939461372758331 -5 0.4501838684082031 11 Unmodified _YSCPYCSKR_ ENSG00000102935|ENST00000563137|ZNF423;nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423 30.63653989081413 0.1413794767160703 3 Y[CS]{I|L}YP{M(Oxidation (M))|F}N 8 5 53.281 0.0 0.0 4.8198 0.0 0.0 0.0 115.0195101373656 115.0195101373656 16.379006473196938 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.3494850021680094 1.292674056792244 Y[CS]{I|L}YP{M(Oxidation (M))|F}N 4.8198 - 8002 + 1 1.488 198410.5 1.0 5604 5341 10936 HBL1_DMSO_200M_050219_1,10947 HBL1_DMSO_200M_050219_1,10947,YSCPYCSKR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10948 56.829 154.0 1950900.0 25 0 252160.0 + 35634 SVAPEFRRL 9 153 358.87337622080014 1073.5982992626004 3 358.8733703494072 MULTI CID FTMS 0 0 0 10936 255380.40625 0.0448666058180324 -3 0.2637748718261719 12 Unmodified _SVAPEFRRL_ ENSG00000173418|ENST00000334982|NAA20;nc|ENSG00000173418|P61599-2|NAA20 42.312485326615175 0.0627620958981271 3 SV{I|L}RMEAR{I|L} 9 5 + 72.365 0.0 0.0 6.7404 6.7404 82.348 0.0 0.0 0.0 19.517039976320625 2.688453122925808 2.688453122925808 2.688453122925808 0 0.9604093769761876 2.0 0.3054621874040891 0.4247425010840047 SV{I|L}RMEAR{I|L};SV{I|L}RMEA{I|L}R;SVAPE{I|L}RR{M(Oxidation (M))|F};SV{I|L}R{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]R;SVA{I|L}[EP]RR{M(Oxidation (M))|F};SV{I|L}A[EP]RR{M(Oxidation (M))|F};SV{I|L}R{M(Oxidation (M))|F}[RP]{[CP]|[EA]};SVGK{I|L}{[QC]|[C(Carbamidomethyl (C))A]}AR{I|L};WA{I|L}[{M(Oxidation (M))|F}T]PAR{I|L};SV{I|L}[KG]{[QC]|[C(Carbamidomethyl (C))A]}AR{I|L} 6.7404;6.49;6.0485;5.0698;4.9911;4.9168;4.89;4.5491;4.3974;4.3596 -;-;-;-;-;-;-;-;-;- 2158 + 1 1.488 246229.8 1.0 5605 5341 10936 HBL1_DMSO_200M_050219_1,10948 HBL1_DMSO_200M_050219_1,10948,SVAPEFRRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10949 56.843 800.0 90515.0 25 0 25352.0 -1 0 40 1151.1478033762194 3450.4215807288583 3 1151.483203113079 MULTI CID FTMS 0 0 0 10936 163870.40625 1.0 0 0.0 13 3 {I|L} 1 -1 6.9897 0.0 0.0 0.20258 0.0 0.0 2577.964440691552 756.3588350885374 3334.3232757800897 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.20258 - 2 + 1 1.488 66843.4 0.8799999952316284 5606 5341 10936 HBL1_DMSO_200M_050219_1,10949 HBL1_DMSO_200M_050219_1,10949, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10950 56.855 697.0 146750.0 25 0 13487.0 + -1 YFYGGLMTTQF 11 99 672.3044815370328 1342.5944101408654 2 672.3052856326103 MULTI CID FTMS 0 0 0 10936 132794.125 0.1359572120243758 12 -1.2245597839355469 14 Oxidation (M) _YFYGGLM(Oxidation (M))TTQF_ REV__ENSG00000156006|ENST00000286479|NAT2 26.268140514670165 0.4754186812857754 3 Y{M(Oxidation (M))|F}[RH]QWW 7 -1 33.249 0.0 0.0 2.4765 0.0 0.0 0.0 236.0679873102172 236.0679873102172 4.512611925321167 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 Y{M(Oxidation (M))|F}[RH]QWW 2.4765 - 456 + 1 1.488 77095.0 1.0 5607 5341 10936 HBL1_DMSO_200M_050219_1,10950 HBL1_DMSO_200M_050219_1,10950,YFYGGLMTTQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10951 56.869 800.0 373040.0 25 0 19789.0 + 18213 KVFDSHPVLHV 11 268 426.5714330706264 1276.6924698120793 3 426.5722228884697 MULTI CID FTMS 0 0 0 10936 129950.15625 0.7448364913557767 -1 0.0791893005371093 15 Unmodified _KVFDSHPVLHV_ ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2 50.64776852458333 0.1140427074720682 3 KV{M(Oxidation (M))|F}DSH[VP]{I|L}HV 11 0 + 67.573 0.0 0.0 5.2928 5.2928 80.935 0.0 0.0 0.0 18.315025164769672 4.771212547196633 4.771212547196633 4.771212547196633 0 2.259772954643989 0.1739251972991735 0.3807196863200844 0.0 + + KV{M(Oxidation (M))|F}DSH[VP]{I|L}HV;KV{M(Oxidation (M))|F}DSH[VP]{I|L}VH;KV[QA]HR[CS]{I|L}HV;KV[QA]HRM[TA]HV;KV{M(Oxidation (M))|F}DSP[HV]{I|L}HV;KV[KA]HK[DC]{I|L}HV;KV[QA]HR[CS]{I|L}VH;KV[QA]HRM[TA]VH;KV{M(Oxidation (M))|F}DSP[HV]{I|L}VH;KV[KA]H[WC(Carbamidomethyl (C))]{I|L}HV 5.2928;4.9191;4.6585;4.6406;4.6209;4.3468;4.2848;4.2669;4.2472;4.0775 +;-;-;-;-;-;-;-;-;- + 5555 + 1 1.488 240893.0 0.8600000143051147 5608 5341 10936 HBL1_DMSO_200M_050219_1,10951 HBL1_DMSO_200M_050219_1,10951,KVFDSHPVLHV True True KVFDSHPVLHV 56.869097 426.57222288847 1399593.25 10936.0 ENSG00000144554|ENST00000675286|FANCD2;;nc|ENSG00000144554|Q9BXW9-1|FANCD2 7.550488154093425 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10952 56.872 56.0 1003500.0 25 0 67582.0 8975 FASFPHMVL 9 90 350.1796522289519 1047.5171272870557 3 350.1794616580009 MULTI CID FTMS 0 0 0 10936 124231.6328125 0.4265723758701174 1 -0.08319091796875 16 Unmodified _FASFPHMVL_ ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-6|MED23 8.745405648335112 0.6093864874670651 3 V 1 8 10.837 0.0 0.0 1.0346 0.0 0.0 930.4377185729916 0.0 930.4377185729916 0.0 0.2604023583755985 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.0346 + + 118 + 1 1.488 55390.8 1.0 5609 5341 10936 HBL1_DMSO_200M_050219_1,10952 HBL1_DMSO_200M_050219_1,10952,FASFPHMVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10954 56.876 8.2 7658600.0 25 0 904340.0 + 4154 DAPHPPLKI 9 89 494.284652859862 986.554752786524 2 494.2848083376884 MULTI CID FTMS 0 0 0 10953 3120513.25 0.0694834649427626 4 -0.419708251953125 1 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 41.8396318013385 0.0653578398400075 3 {[DA]|[EG]}PHP[{I|L}P]K{I|L} 9 0 + 52.831 0.0 0.0 5.3551 5.3551 88.539 0.0 0.0 0.0 36.14902171010165 9.983193732736028 9.983193732736028 20.48455006504028 0 1.7302046884880935 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}PHP[{I|L}P]K{I|L};{I|L}{[CT]|[{M(Oxidation (M))|F}G]}CP[{I|L}P]K{I|L};{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]P[{I|L}P]K{I|L} 5.3551;3.2788;3.1058 +;-;- + 120 + 1 1.488 52304.0 1.0 5610 5342 10953 HBL1_DMSO_200M_050219_1,10954 HBL1_DMSO_200M_050219_1,10954,DAPHPPLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10955 56.877 32.0 1475500.0 25 0 208490.0 -1 YACNFPCSY 9 78 591.2245078789098 1180.4344628246197 2 591.2250244021416 MULTI CID FTMS 0 0 0 10953 1495257.0 0.1859849534803465 2 -0.2326469421386718 2 2 Carbamidomethyl (C) _YAC(Carbamidomethyl (C))NFPC(Carbamidomethyl (C))SY_ ENSG00000206106|ENST00000382830|KRTAP22-2 5.230669730166228 0.7320841359114558 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QNM 5 -1 25.15 0.0 0.0 2.1306 0.0 0.0 0.0 570.1683855143257 570.1683855143257 10.546218740408904 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QNM 2.1306 - 59 1 1.488 39771.5 1.0 5611 5342 10953 HBL1_DMSO_200M_050219_1,10955 HBL1_DMSO_200M_050219_1,10955,YACNFPCSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10956 56.878 12.0 2237800.0 25 0 316130.0 + 4589 DAYSSFRSV 9 59 516.2430073714669 1030.4714618097337 2 516.2440063357353 MULTI CID FTMS 0 0 0 10953 1797575.75 0.2742840439101475 -2 0.1623802185058593 3 Unmodified _DAYSSFRSV_ ENSG00000143337|ENST00000606911|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-4|TOR1AIP1 13.042465956692816 0.4836390050082244 3 {[DA]|[EG]}YS 4 5 39.481 0.0 0.0 3.8314 0.0 0.0 0.0 591.2913565325997 591.2913565325997 36.7170870664393 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.4247425010840047 0.0 + {[DA]|[EG]}YS 3.8314 + + 15 + 1 1.488 26630.0 1.0 5612 5342 10953 HBL1_DMSO_200M_050219_1,10956 HBL1_DMSO_200M_050219_1,10956,DAYSSFRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10957 56.88 23.0 966890.0 25 0 47941.0 + -1 IMTSKGVSWP 10 69 561.2869195927296 1120.5592862522592 2 561.2867309451103 MULTI CID FTMS 0 0 0 10953 1660674.125 0.6499665510737267 2 -0.2326469421386718 4 Oxidation (M) _IM(Oxidation (M))TSKGVSWP_ REV__ENSG00000185739|ENST00000399609|SRL;REV__nc|ENSG00000185739|Q86TD4-1|SRL;REV__nc|ENSG00000185739|Q86TD4-3|SRL 7.289230182591677 0.6929195370588109 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEM 5 -1 31.171 0.0 0.0 2.7817 0.0 0.0 0.0 469.276485309153 469.276485309153 27.191512336730028 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEM 2.7817 - 52 1 1.488 22074.0 1.0 5613 5342 10953 HBL1_DMSO_200M_050219_1,10957 HBL1_DMSO_200M_050219_1,10957,IMTSKGVSWP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10958 56.881 15.0 2300100.0 25 0 294660.0 + 21637 LPLDIRPN 8 52 469.276764901342 936.538976869484 2 469.2768432497978 MULTI CID FTMS 0 0 0 10953 1465761.875 0.0819483457610168 21 -1.68145751953125 5 Unmodified _LPLDIRPN_ REV__ENST00000512756.5_1_1:103573642-103573714:-|nuORF 14.838274106304384 0.6917062315640577 3 {I|L}P{I|L} 3 -1 50.445 0.0 0.0 5.3864 0.0 0.0 0.0 610.2982271783811 610.2982271783811 43.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P{I|L} 5.3864 + + 9 + 1 1.488 34028.1 1.0 5614 5342 10953 HBL1_DMSO_200M_050219_1,10958 HBL1_DMSO_200M_050219_1,10958,LPLDIRPN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10959 56.882 23.0 995030.0 25 0 172180.0 + 31884 RTLPETLDPA 10 52 556.801165553666 1111.587778174132 2 556.8010742068291 MULTI CID FTMS 0 0 0 10953 1352709.25 0.4253574611801474 2 -0.2326469421386718 6 Unmodified _RTLPETLDPA_ ENSG00000065518|ENST00000184266|NDUFB4;nc|ENSG00000065518|O95168-2|NDUFB4 10.150570793230772 0.6772252923741907 3 WD{I|L} 3 9 36.198 0.0 0.0 3.2564 0.0 0.0 0.0 694.3529757135374 694.3529757135374 34.93882771791494 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 WD{I|L} 3.2564 - 15 + 1 1.488 27484.7 1.0 5615 5342 10953 HBL1_DMSO_200M_050219_1,10959 HBL1_DMSO_200M_050219_1,10959,RTLPETLDPA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10960 56.883 20.0 1549300.0 25 0 206350.0 + 32634 SAYLVAEKV 9 58 490.2767279475564 978.5389029619128 2 490.2766601443291 MULTI CID FTMS 0 0 0 10953 1291894.0 0.1598122077226926 -2 0.1623802185058593 7 Unmodified _SAYLVAEKV_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P 34.93206674587334 0.1032771302489716 3 {[SA]|[TG]}Y{I|L}VAE{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 72.171 0.0 0.0 7.3754 7.3754 96.383 0.0 0.0 0.0 56.02690962719841 5.642492736872597 5.642492736872597 72.17084689121528 0 0.8252574989159953 1.6989700043360187 0.805462187404089 0.0 + + {[SA]|[TG]}Y{I|L}VAE{[QV]|[N{I|L}]|[RA]|[KV]} 7.3754 + + 66 + 1 1.488 31499.6 1.0 5616 5342 10953 HBL1_DMSO_200M_050219_1,10960 HBL1_DMSO_200M_050219_1,10960,SAYLVAEKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10961 56.884 42.0 835350.0 25 0 105730.0 + + 5142 KTTTIAVEV 9 63 481.2823094913325 960.550066049465 2 481.2821227908134 MULTI CID FTMS 0 0 0 10953 982781.5 0.364434079640617 -4 0.3469657897949219 8 Unmodified _DIIFLIEV_ ENSG00000115677|ENST00000310931|HDLBP;ENST00000470710.1_1_2:242194755-242195742:-|nuORF 19.438996006549623 0.6237395211498085 3 EV 2 -1 24.949 0.0 0.0 2.5973 0.0 0.0 714.4282684193854 0.0 714.4282684193854 0.0 8.750612633917001 0.0 0.0 0 0.5 0.0 0.5 0.0 EV 2.5973 + + 27 + 1 1.488 33296.4 1.0 5617 5342 10953 HBL1_DMSO_200M_050219_1,10961 HBL1_DMSO_200M_050219_1,10961,DIIFLIEV False False KTTTIAVEV 56.884357 481.282122790813 27570556.0 10953.0 ENSG00000115677|ENST00000310931|HDLBP;;ENST00000470710.1_1_2:242194755-242195742:-|nuORF 0.1219690442085266 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10962 56.886 9.2 1687600.0 25 0 94237.0 + 10389 FSSSEHKKC 9 48 526.7435222907668 1051.4724916483335 2 526.7433959841728 MULTI CID FTMS 0 0 0 10953 888871.4375 0.1359376427771535 -4 0.3469657897949219 9 Unmodified _FSSSEHKKC_ REV__ENST00000480745.5_1_20:43595209-43601992:+|nuORF 4.3292370932331545 0.7635526921153418 3 {M(Oxidation (M))|F} 1 -1 11.99 0.0 0.0 1.1403 0.0 0.0 886.3933881100508 0.0 886.3933881100508 0.0 8.010299956639813 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1403 + + 12 + 1 1.488 19308.5 1.0 5618 5342 10953 HBL1_DMSO_200M_050219_1,10962 HBL1_DMSO_200M_050219_1,10962,FSSSEHKKC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10963 56.893 408.0 210490.0 25 0 55694.0 -1 0 44 1136.8087673941232 3407.404472782569 3 1137.142016589642 MULTI CID FTMS 0 0 0 10953 500291.46875 1.0 0 0.0 10 3 {M(Oxidation (M))|F}C(Carbamidomethyl (C))Y 3 -1 11.427 0.0 0.0 0.33535 0.0 0.0 1473.4909728819823 1460.7044161432252 2934.1953890252075 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C))Y 0.33535 - 19 + 1 1.488 81966.9 1.0 5619 5342 10953 HBL1_DMSO_200M_050219_1,10963 HBL1_DMSO_200M_050219_1,10963, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10964 56.894 41.0 934100.0 25 0 110400.0 + 27395 PIIHAYFW 8 50 349.5212184077217 1045.5418258233651 3 349.5212585330009 MULTI CID FTMS 0 0 0 10953 497390.125 0.6454674082530207 -1 0.08319091796875 11 Unmodified _PIIHAYFW_ REV__ENSG00000131238|ENST00000642050|PPT1;REV__nc|ENSG00000131238|P50897-2|PPT1 11.114462752807354 0.7467182956244686 3 [{I|L}P]{I|L} 3 -1 27.179 0.0 0.0 2.5995 0.0 0.0 0.0 719.2982810992638 719.2982810992638 2.798859261803983 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [{I|L}P]{I|L} 2.5995 + + 6 + 1 1.488 44313.1 1.0 5620 5342 10953 HBL1_DMSO_200M_050219_1,10964 HBL1_DMSO_200M_050219_1,10964,PIIHAYFW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10965 56.897 126.0 969980.0 25 0 146880.0 + -1 FVIEMCEHA 9 103 576.24724478004 1150.47993662688 2 576.2473022341728 MULTI CID FTMS 0 0 0 10953 403064.5 0.7581157302767162 -1 0.08319091796875 12 Carbamidomethyl (C),Oxidation (M) _FVIEM(Oxidation (M))C(Carbamidomethyl (C))EHA_ REV__nc|ENSG00000183981|A6NCF6|MAGEA13P 16.942295170755138 0.3780752226737986 3 HAED{I|L}VE 7 -1 54.685 0.0 0.0 4.7532 0.0 0.0 339.0921803205094 0.0 339.0921803205094 0.0 37.7738823421749 0.0 0.0 0 0.4247425010840047 0.0 0.7742275032520141 0.0 HAED{I|L}VE 4.7532 - 226 1 1.488 95851.3 1.0 5621 5342 10953 HBL1_DMSO_200M_050219_1,10965 HBL1_DMSO_200M_050219_1,10965,FVIEMCEHA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10966 56.898 38.0 450610.0 25 0 34625.0 + 6250 DTNADKQLSF 10 45 569.7724812663439 1137.5304095994877 2 569.7722656130791 MULTI CID FTMS 0 0 0 10953 356372.0 0.1342695135371276 2 -0.2326469421386718 13 Unmodified _DTNADKQLSF_ ENSG00000163220|ENST00000368738|S100A9 6.2057823575117 0.6979311171683138 3 S{M(Oxidation (M))|F} 2 8 20.969 0.0 0.0 1.8434 0.0 0.0 885.4194609684315 0.0 885.4194609684315 0.0 10.511525224473813 0.0 0.0 0 0.0 0.0 0.0 0.0 + S{M(Oxidation (M))|F} 1.8434 + + 9 + 1 1.488 21833.2 1.0 5622 5342 10953 HBL1_DMSO_200M_050219_1,10966 HBL1_DMSO_200M_050219_1,10966,DTNADKQLSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10967 56.904 364.0 199050.0 25 0 16627.0 -1 0 70 634.9518226295999 3169.722730814999 5 635.1526367068291 MULTI CID FTMS 0 0 0 10953 281782.84375 1.0 0 0.0 14 3 Q{I|L}{I|L}EQE 6 -1 37.594 0.0 0.0 1.186 0.0 0.0 2411.325597834514 0.0 2411.325597834514 0.0 18.14326570884305 0.0 0.0 0 0.718765315847925 0.0 0.5 0.0 Q{I|L}{I|L}EQE 1.186 - 97 1 1.488 61251.6 1.0 5623 5342 10953 HBL1_DMSO_200M_050219_1,10967 HBL1_DMSO_200M_050219_1,10967, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10968 56.912 425.0 70648.0 25 0 3498.2 -1 LMLLLYIWQVY 11 70 735.9041015505791 0 735.9041015505791 PEAK CID FTMS 0 0 0 -1 0 15 Oxidation (M) _LM(Oxidation (M))LLLYIWQVY_ ENSG00000137842|ENST00000260403|TMEM62 3.5964929083625545 0.4761840153648598 3 YP 2 -1 8.5835 0.0 0.0 0.58399 0.0 0.0 371.2586285707092 835.3967379205686 1206.6553664912778 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YP 0.58399 - 18 + 1 1.488 28084.5 1.0 5624 5342 10953 HBL1_DMSO_200M_050219_1,10968 HBL1_DMSO_200M_050219_1,10968,LMLLLYIWQVY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10969 56.92 450.0 189460.0 25 0 19523.0 -1 0 63 793.6900775626767 0 793.6898071169853 PEAK CID FTMS 0 0 0 10953 197285.921875 1.0 0 0.0 16 3 E 1 -1 7.7866 0.0 0.0 0.49115 0.0 0.0 1181.1750026821908 272.1253450983032 1453.300347780494 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 E 0.49115 - 25 + 1 1.488 66127.9 1.0 5625 5342 10953 HBL1_DMSO_200M_050219_1,10969 HBL1_DMSO_200M_050219_1,10969, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10970 56.928 439.0 165240.0 25 0 12395.0 + 8010 EMMEKKDEQFY 11 98 739.3207606712606 1476.626968409321 2 739.3201171755791 MULTI CID FTMS 0 0 0 10953 167661.078125 1.0 0 0.0 17 Unmodified _EMMEKKDEQFY_ REV__ENSG00000102174|ENST00000379374|PHEX 5.731851221503515 0.8481046878870278 3 {[QG]|[NA]}G[HQ]EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 63.73 0.0 0.0 4.3159 4.3159 80.462 0.0 0.0 0.0 7.905505331025253 10.696083918116416 7.905505331025253 7.905505331025253 0 0.8182503180159344 0.6575773191777937 0.0 0.4247425010840047 {[QG]|[NA]}G[HQ]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HQ]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HQ]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HQ]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HQ]EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]GG[HQ]EAQQNA{M(Oxidation (M))|F}Y;[PS][HA]DEAQQNA{M(Oxidation (M))|F}Y;[AG]N[HQ]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HQ]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HQ]EAQQGGA{M(Oxidation (M))|F}Y 4.3159;3.7805;3.7015;3.7015;3.7015;3.4267;3.2244;3.179;3.1644;3.1644 -;-;-;-;-;-;-;-;-;- 1014 1 1.488 58278.6 1.0 5626 5342 10953 HBL1_DMSO_200M_050219_1,10970 HBL1_DMSO_200M_050219_1,10970,EMMEKKDEQFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10971 56.935 418.0 96864.0 25 0 8920.9 -1 0 69 640.3119968326746 1917.914161098224 3 640.3114501833916 MULTI CID FTMS 0 0 0 10953 137438.4375 1.0 0 0.0 18 3 {[DA]|[EG]}V 3 -1 30.062 0.0 0.0 1.5674 0.0 0.0 0.0 1629.7590457019926 1629.7590457019926 9.764902833277844 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V 1.5674 - 96 1 1.488 41295.8 1.0 5627 5342 10953 HBL1_DMSO_200M_050219_1,10971 HBL1_DMSO_200M_050219_1,10971, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10972 56.942 288.0 366550.0 25 0 18739.0 10109 FPVKVAPRL 9 163 342.8875219459088 1025.6407364379263 3 343.2220031619072 MULTI CID FTMS 0 0 0 10953 155192.0 1.0 0 0.0 19 Unmodified _FPVKVAPRL_ ENST00000490756.1_1_16:88799161-88799326:-|nuORF 7.910154910731844 0.6385446671287552 3 V{I|L}KM{I|L}VQPV 9 8 + 39.291 0.0 0.0 3.8309 3.8309 73.777 0.0 0.0 0.0 27.87140106883469 1.9696791605431656 1.9696791605431656 3.0102999566398125 0 0.2628967585553498 1.3979400086720375 0.0 0.0 V{I|L}KM{I|L}VQPV;V{I|L}MK{I|L}VQPV;V{I|L}KM{I|L}VQVP;V{I|L}MK{I|L}VQVP;V{I|L}KM{I|L}V[NP]{I|L};V{I|L}KM{I|L}V[AG]PV;V{I|L}MK{I|L}V[NP]{I|L};V{I|L}MK{I|L}V[AG]PV;V{I|L}KM{I|L}V[AG]VP;V{I|L}MK{I|L}V[AG]VP 3.8309;3.5374;3.3657;3.0722;2.967;2.9331;2.6735;2.6396;2.4679;2.1744 -;-;-;-;-;-;-;-;-;- 175 + 1 1.488 91553.8 1.0 5628 5342 10953 HBL1_DMSO_200M_050219_1,10972 HBL1_DMSO_200M_050219_1,10972,FPVKVAPRL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10973 56.954 711.0 119160.0 25 0 32450.0 -1 0 42 1102.7974477675757 3305.370513902927 3 1103.131152331829 MULTI CID FTMS 0 0 0 10953 136732.96875 0.5960769274782642 -2 0.1623802185058593 20 3 E 1 -1 6.9897 0.0 0.0 0.21146 0.0 0.0 2649.1443605851614 524.1639498346311 3173.3083104197926 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21146 - 6 + 1 1.488 79616.3 1.0 5629 5342 10953 HBL1_DMSO_200M_050219_1,10973 HBL1_DMSO_200M_050219_1,10973, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10975 56.958 6.5 7238400.0 25 0 784830.0 + 44988 YPSETFTRV 9 59 550.274518954315 1098.53448497543 2 550.2747680544853 MULTI CID FTMS 0 0 0 10974 8328098.0 0.7096262721550035 1 -0.15032958984375 1 Unmodified _YPSETFTRV_ ENSG00000164109|ENST00000296509|MAD2L1;ENST00000511295.1_1_4:120986776-120987958:-|nuORF;nc|ENSG00000164109|Q13257-2|MAD2L1 28.49450938151212 0.1686335738423394 3 YPSET{M(Oxidation (M))|F} 6 3 74.826 0.0 0.0 6.8114 0.0 0.0 0.0 371.20566736392817 371.20566736392817 51.36623162815269 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 + YPSET{M(Oxidation (M))|F} 6.8114 + + 155 + 1 1.498 45602.8 1.0 5630 5343 10974 HBL1_DMSO_200M_050219_1,10975 HBL1_DMSO_200M_050219_1,10975,YPSETFTRV False True YPSETFTRV 56.958415 550.274768054485 209926512.0 10974.0 nc|ENSG00000164109|Q13257-2|MAD2L1;;ENST00000511295.1_1_4:120986776-120987958:-|nuORF;;ENSG00000164109|ENST00000296509|MAD2L1 6.848920822143555 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10976 56.96 9.7 10576000.0 25 0 1915100.0 + 41688 VPRTSEIYV 9 77 532.2928424031489 1062.5711318730978 2 532.2929565310478 MULTI CID FTMS 0 0 0 10974 4883554.5 0.5806745785444714 1 -0.15032958984375 2 Unmodified _VPRTSEIYV_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 24.99096001346401 0.2132109383330889 3 V{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[WR]V 8 7 + 41.137 0.0 0.0 3.8714 3.8714 84.835 0.0 0.0 0.0 21.365006360318684 0.3913622748569167 0.3913622748569167 41.136759398218885 0 0.805462187404089 1.5228787452803376 0.5 0.0 V{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[WR]V 3.8714 - 114 + 1 1.498 84786.1 1.0 5631 5343 10974 HBL1_DMSO_200M_050219_1,10976 HBL1_DMSO_200M_050219_1,10976,VPRTSEIYV False True VPRTSEIYV 56.959594 532.292956531048 127260944.0 10974.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94517539-94521656:-|nuORF 4.094715595245361 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10977 56.961 17.0 3523300.0 25 0 837200.0 + 9938 FPGKHFQEI 9 78 368.194404519104 1101.5613841575118 3 368.1942932009697 MULTI CID FTMS 0 0 0 10974 3139929.0 0.1778170884500319 32 -2.742431640625 3 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 15.248480904072842 0.4239247793462406 3 N[WE]PE{I|L}{M(Oxidation (M))|F} 7 8 28.716 0.0 0.0 2.6068 0.0 0.0 168.12689406562657 0.0 168.12689406562657 0.0 8.661968799114845 0.0 0.0 0 0.0 0.0 0.0 0.5 N[WE]PE{I|L}{M(Oxidation (M))|F} 2.6068 - 371 1 1.498 59435.3 1.0 5632 5343 10974 HBL1_DMSO_200M_050219_1,10977 HBL1_DMSO_200M_050219_1,10977,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10978 56.962 26.0 1843700.0 25 0 276240.0 + 5805 DPPYSRVI 8 62 473.7532497189813 945.4919465047626 2 473.7533141970634 MULTI CID FTMS 0 0 0 10974 2241348.0 0.5395510974675548 -3 0.2446975708007812 4 Unmodified _DPPYSRVI_ ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2 29.081581746732265 0.4323690340403521 3 DPPY[RV]S{I|L} 8 2 + 64.373 0.0 0.0 6.8084 6.8084 88.685 0.0 0.0 0.0 50.8783628755652 3.187587626244124 3.187587626244124 8.010299956639813 0 0.9247425010840048 2.0 0.0 0.0 DPPY[RV]S{I|L};DP{I|L}{M(Oxidation (M))|F}[RV]S{I|L} 6.8084;5.9612 -;- 74 + 1 1.498 44340.0 1.0 5633 5343 10974 HBL1_DMSO_200M_050219_1,10978 HBL1_DMSO_200M_050219_1,10978,DPPYSRVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10979 56.963 39.0 1504700.0 25 0 161720.0 + 1274 AIPGVVEKV 9 89 456.2819242177631 910.549295502326 2 456.2812377810478 MULTI CID FTMS 0 0 0 10974 1375331.375 1.0 0 0.0 5 Unmodified _AIPGVVEKV_ ENSG00000039123|ENST00000230640|MTREX 38.17557092003332 0.0854718145212029 3 [{I|L}A]PGVVEKV 9 0 + 60.064 0.0 0.0 6.5965 6.5965 86.693 0.0 0.0 0.0 39.17378631765045 9.87765543582988 9.87765543582988 6.478174818886373 0 0.3807196863200844 2.0 0.6694451763165201 0.0 + + [{I|L}A]PGVVEKV;[{I|L}A]PRVEKV;[{I|L}A]V[PG]VEKV;[{I|L}A]PGVV[VG]TV;[{I|L}A]PGVV[VG]S{I|L};[{I|L}A]PGV[RV]TV;[{I|L}A]PGV[RV]S{I|L};[{I|L}A]V[RP]EKV;[{I|L}A]PGV[WR]{I|L};[{I|L}A]PRV[VG]TV 6.5965;5.885;5.5823;5.2405;5.1951;4.8673;4.8218;4.7833;4.6981;4.5231 +;-;-;-;-;-;-;-;-;- + 296 + 1 1.498 50609.2 1.0 5634 5343 10974 HBL1_DMSO_200M_050219_1,10979 HBL1_DMSO_200M_050219_1,10979,AIPGVVEKV True True AIPGVVEKV 56.963132 456.281237781048 9860195.0 10974.0 ENSG00000039123|ENST00000230640|MTREX 5.3831790288289385 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10980 56.964 52.0 1896900.0 25 0 377260.0 + 35635 SVAPEFRRL 9 70 537.8072050099098 1073.5998570866195 2 537.8077880740166 MULTI CID FTMS 0 0 0 10974 1183235.875 0.6811614654026147 -1 0.0823173522949218 6 Unmodified _SVAPEFRRL_ ENSG00000173418|ENST00000334982|NAA20;nc|ENSG00000173418|P61599-2|NAA20 33.4449034751529 0.1114409586740657 3 [VS]A{I|L} 4 5 38.232 0.0 0.0 3.5611 0.0 0.0 0.0 700.3555801283206 700.3555801283206 17.124016093940064 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 [VS]A{I|L} 3.5611 - 100 + 1 1.498 81516.5 1.0 5635 5343 10974 HBL1_DMSO_200M_050219_1,10980 HBL1_DMSO_200M_050219_1,10980,SVAPEFRRL True True SVAPEFRRL 56.964488 537.807788074017 126995306.0 10974.0 nc|ENSG00000173418|P61599-2|NAA20;;ENSG00000173418|ENST00000334982|NAA20 5.326274394989014 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10981 56.966 60.0 1560300.0 25 0 160300.0 + 4148 DAPHPPLKI 9 96 329.8590105895294 986.5552023687884 3 329.8587219119072 MULTI CID FTMS 0 0 0 10974 968790.4375 0.022403728173956 5 -0.5291099548339844 7 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 19.256988751693697 0.3154191944385105 3 {[DA]|[EG]}PH{I|L}A 6 4 45.164 0.0 0.0 4.5779 0.0 0.0 0.0 379.2357882135376 379.2357882135376 34.45046257204389 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[DA]|[EG]}PH{I|L}A 4.5779 - 65 + 1 1.498 78776.2 1.0 5636 5343 10974 HBL1_DMSO_200M_050219_1,10981 HBL1_DMSO_200M_050219_1,10981,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10982 56.969 134.0 722550.0 25 0 81100.0 + 44903 YPPPEVRNI 9 88 542.7931421868918 1083.5717314405836 2 542.7928344607353 MULTI CID FTMS 0 0 0 10974 629522.375 0.0132493124914077 32 -2.742431640625 8 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 30.7034409873982 0.1405282614900322 3 YPPPEV 6 3 63.215 0.0 0.0 5.8339 0.0 0.0 0.0 398.2134493463501 398.2134493463501 52.50126936525401 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + YPPPEV 5.8339 + + 193 + 1 1.498 88237.6 1.0 5637 5343 10974 HBL1_DMSO_200M_050219_1,10982 HBL1_DMSO_200M_050219_1,10982,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10983 56.978 543.0 363630.0 25 0 27606.0 -1 0 126 881.9127604281156 1761.810967923031 2 881.9155151247978 MULTI CID FTMS 0 0 0 10974 400056.1875 0.297950934745621 3 -0.3373908996582031 9 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAQRDG{M(Oxidation (M))|F}{I|L}Q 16 -1 + 113.03 0.0 0.0 6.4158 6.4158 78.243 0.0 0.0 0.0 7.659167939666318 12.82109888434134 7.659167939666318 0.6888128940781257 0 2.4674165578762484 0.0 0.7302046884880937 1.841129063296272 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAQRDG{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQRDG{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}GGEAQRDG{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEA[AG]RDG{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[AG]RDG{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEAQRDG{M(Oxidation (M))|F}{I|L}Q;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}N{I|L}GRQAEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEA{I|L}[NG]DG{M(Oxidation (M))|F}{I|L}Q 6.4158;6.3767;5.9042;5.9042;5.9042;5.8641;5.8641;5.8641;5.5648;5.5625 -;-;-;-;-;-;-;-;-;- 14668 + 1 1.498 132260.1 1.0 5638 5343 10974 HBL1_DMSO_200M_050219_1,10983 HBL1_DMSO_200M_050219_1,10983, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10984 56.988 529.0 400710.0 25 0 64900.0 -1 VLPMPILV 8 180 449.2790059970128 896.5434590608255 2 449.2794067263603 MULTI CID FTMS 0 0 0 10974 392637.0625 0.2051498609288647 3 -0.3373908996582031 10 Oxidation (M) _VLPM(Oxidation (M))PILV_ ENSG00000144040|ENST00000272433|SFXN5;ENST00000461352.5_1_2:73172212-73286292:-|nuORF;ENST00000474528.5_1_2:73172153-73286292:-|nuORF 32.45364647766026 0.3613649037604678 3 {I|L}{I|L}V 3 -1 26.682 0.0 0.0 2.9761 0.0 0.0 553.298965054813 0.0 553.298965054813 0.0 12.078343878162343 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{I|L}V 2.9761 + + 272 1 1.498 162106.9 1.0 5639 5343 10974 HBL1_DMSO_200M_050219_1,10984 HBL1_DMSO_200M_050219_1,10984,VLPMPILV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10985 56.999 628.0 353190.0 25 0 51544.0 40408 VIFDCSHEMA 10 189 384.5004394411308 1150.4794889235925 3 384.5001098513603 MULTI CID FTMS 0 0 0 10974 327250.5 1.0 0 0.0 11 Unmodified _VIFDCSHEMA_ ENSG00000164418|ENST00000369134|GRIK2;nc|ENSG00000164418|Q13002-2|GRIK2;nc|ENSG00000164418|Q13002-3|GRIK2;nc|ENSG00000164418|Q13002-4|GRIK2;nc|ENSG00000164418|Q13002-5|GRIK2;nc|ENSG00000164418|Q13002-6|GRIK2;nc|ENSG00000164418|Q13002-7|GRIK2 20.453626601364224 0.5043500229302764 3 [{M(Oxidation (M))|F}V]{I|L}DEAH 7 7 35.644 0.0 0.0 3.0982 0.0 0.0 0.0 336.0701998346313 336.0701998346313 13.033007739379023 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.6861818737241735 0.0 [{M(Oxidation (M))|F}V]{I|L}DEAH 3.0982 - 617 + 1 1.498 174254.1 1.0 5640 5343 10974 HBL1_DMSO_200M_050219_1,10985 HBL1_DMSO_200M_050219_1,10985,VIFDCSHEMA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10986 57.012 772.0 145540.0 25 0 42157.0 -1 0 49 1171.4915903959225 3511.452941787968 3 1171.829028308392 MULTI CID FTMS 0 0 0 10974 278239.65625 1.0 0 0.0 12 3 YGYWS 5 -1 23.443 0.0 0.0 0.66763 0.0 0.0 1781.63758641863 1070.5748995416627 2852.2124859602927 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YGYWS 0.66763 - 211 + 1 1.498 98118.0 1.0 5641 5343 10974 HBL1_DMSO_200M_050219_1,10986 HBL1_DMSO_200M_050219_1,10986, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10987 57.022 560.0 294260.0 25 0 13565.0 -1 0 84 629.1220195298519 0 629.1225463747978 PEAK CID FTMS 0 0 0 10974 275062.75 1.0 0 0.0 13 3 VS 2 -1 8.4604 0.0 0.0 0.67348 0.0 0.0 758.9804759720099 308.12571130924067 1067.1061872812506 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 VS 0.67348 - 17 + 1 1.498 125995.6 1.0 5642 5343 10974 HBL1_DMSO_200M_050219_1,10987 HBL1_DMSO_200M_050219_1,10987, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10988 57.027 285.0 605750.0 25 0 100850.0 + 6517 EAKVLQLTV 9 189 334.20694670015206 999.5990107006562 3 334.2083618044853 MULTI CID FTMS 0 0 0 10974 263380.53125 0.4728225319103626 -1 0.0823173522949218 14 Unmodified _EAKVLQLTV_ ENSG00000179071|ENST00000316398|CCDC89 47.74868867922204 0.0453060283459952 3 [{I|L}A]KD{I|L}Q{I|L}{[TV]|[{I|L}S]} 9 2 + 23.806 0.0 0.0 2.3816 2.3816 67.012 0.0 0.0 0.0 6.781993496232495 -0.2422750325201406 -0.2422750325201406 0.6251459789050529 0 0.0 0.8239087409443188 1.110924374808178 0.2396518287104437 [{I|L}A]KD{I|L}Q{I|L}{[TV]|[{I|L}S]};[{I|L}A]KD{I|L}QT[{I|L}V];[{I|L}A]KD{I|L}AG{I|L}{[TV]|[{I|L}S]};[{I|L}A]KD{I|L}AGT[{I|L}V];[KA]{I|L}D{I|L}Q{I|L}{[TV]|[{I|L}S]};[KA]{I|L}D{I|L}QT[{I|L}V];[KA]{I|L}D{I|L}AG{I|L}{[TV]|[{I|L}S]};[{I|L}A]KDAAV{I|L}{[TV]|[{I|L}S]};[KA]{I|L}D{I|L}AGT[{I|L}V];[{I|L}A]KDAAVT[{I|L}V] 2.3816;2.3191;2.1316;2.0691;1.6493;1.5868;1.3993;1.3824;1.3368;1.3199 -;-;-;-;-;-;-;-;-;- 1431 1 1.498 138010.5 1.0 5643 5343 10974 HBL1_DMSO_200M_050219_1,10988 HBL1_DMSO_200M_050219_1,10988,EAKVLQLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10989 57.042 782.0 259390.0 25 0 14293.0 -1 0 191 406.7550247545598 811.4954965759197 2 407.2038452029228 MULTI CID FTMS 0 0 0 10974 28821.45703125 0.0709725477005461 -14 1.194477081298828 15 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKPPV 7 -1 + 51.131 0.0 0.0 6.3009 6.3009 89.89 0.0 0.0 0.0 10.700718090006092 10.700718090006092 10.700718090006092 10.700718090006092 0 1.1677353201839438 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKPPV;P{M(Oxidation (M))|F}KPPKV;[KP]PK{M(Oxidation (M))|F}PV;P{M(Oxidation (M))|F}KV[KP]P;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PKPPV;{[HG]|PP}KK{M(Oxidation (M))|F}PV;VVSRRPV;P{M(Oxidation (M))|F}VK[KP]P 6.3009;4.9822;3.0371;2.9476;2.9467;2.5206;2.1496;1.8348 -;-;-;-;-;-;-;- 430 1 1.498 160186.7 1.0 5644 5343 10974 HBL1_DMSO_200M_050219_1,10989 HBL1_DMSO_200M_050219_1,10989, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10990 57.053 656.0 95706.0 25 0 13833.0 + 1004 AFYEHAQTYY 10 103 646.7829582282759 1291.5513635233517 2 646.7828857302666 MULTI CID FTMS 0 0 0 10974 200385.5625 0.1511262887244237 3 -0.3373908996582031 16 Unmodified _AFYEHAQTYY_ ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11 29.081581746732265 0.3152867722954398 3 AQTYY 5 5 30.886 0.0 0.0 2.3914 0.0 0.0 647.2733832870621 0.0 647.2733832870621 0.0 15.400990676322904 0.0 0.0 0 0.8182503180159344 0.0 0.5 0.0 + AQTYY 2.3914 + + 272 1 1.498 49051.4 1.0 5645 5343 10974 HBL1_DMSO_200M_050219_1,10990 HBL1_DMSO_200M_050219_1,10990,AFYEHAQTYY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10991 57.065 687.0 97526.0 25 0 7512.7 + -1 LTSGFIRCCWM 11 107 687.3134496361519 0 687.3137084841728 PEAK CID FTMS 0 0 0 10974 192252.71875 0.9126327457996976 1 -0.15032958984375 17 Carbamidomethyl (C) _LTSGFIRCC(Carbamidomethyl (C))WM_ REV__ENST00000422983.1_1_1:53038862-53039237:+|nuORF 6.2057823575117 0.47618401536486 3 Q 1 -1 6.5938 0.0 0.0 0.48038 0.0 0.0 1098.5165649443754 143.0142000787719 1241.5307650231473 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 Q 0.48038 - 68 + 1 1.498 67971.9 1.0 5646 5343 10974 HBL1_DMSO_200M_050219_1,10991 HBL1_DMSO_200M_050219_1,10991,LTSGFIRCCWM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10992 57.08 800.0 52656.0 25 0 6271.1 -1 0 69 1038.476367175579 0 1038.476367175579 PEAK CID FTMS 0 0 0 -1 0 18 3 {I|L}TMTKA 6 -1 30.425 0.0 0.0 1.4663 0.0 0.0 1055.4201893298707 371.1367586725219 1426.5569480023926 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 {I|L}TMTKA 1.4663 - 167 + 1 1.498 40051.3 0.9300000071525574 5647 5343 10974 HBL1_DMSO_200M_050219_1,10992 HBL1_DMSO_200M_050219_1,10992, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 10993 57.092 692.0 124020.0 25 0 14846.0 + 14302 IEKSTTSLLVD 11 76 603.3347772991103 0 603.7038452029228 PEAK CID FTMS 0 0 0 10974 69669.6484375 0.3176355632694128 -4 0.2881736755371094 19 Unmodified _IEKSTTSLLVD_ REV__ENSG00000119844|ENST00000409933|AFTPH;REV__ENST00000498706.5_1_2:64778608-64806757:+|nuORF;REV__nc|ENSG00000119844|Q6ULP2-6|AFTPH;REV__nc|ENSG00000119844|Q6ULP2-7|AFTPH;REV__nc|ENSG00000119844|Q6ULP2-8|AFTPH;REV__nc|ENSG00000119844|Q6ULP2-9|AFTPH 15.248480904072842 0.4017935032673427 3 VD{I|L} 3 -1 20.802 0.0 0.0 1.7268 0.0 0.0 620.3365945378706 254.11529085667823 874.4518853945489 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 VD{I|L} 1.7268 - 84 + 1 1.498 75627.9 1.0 5648 5343 10974 HBL1_DMSO_200M_050219_1,10993 HBL1_DMSO_200M_050219_1,10993,IEKSTTSLLVD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 10994 57.104 709.0 195900.0 25 0 9350.6 28593 PTWRENCSF 9 188 570.2490508609632 1138.4835487887262 2 570.7535278201103 MULTI CID FTMS 0 0 0 10974 154353.75 0.524109045818318 3 -0.3373908996582031 20 Unmodified _PTWRENCSF_ ENST00000264956.10_2_4:5813382-5814396:+|nuORF 18.13498045792455 0.3457906370836843 3 YYP 3 9 21.461 0.0 0.0 1.885 0.0 0.0 0.0 712.2800630311668 712.2800630311668 6.614503356056822 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 YYP 1.885 - 1001 1 1.498 105582.7 1.0 5649 5343 10974 HBL1_DMSO_200M_050219_1,10994 HBL1_DMSO_200M_050219_1,10994,PTWRENCSF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 10996 57.109 5.7 6905900.0 25 0 854080.0 + 41186 VPDTSRIYV 9 48 525.2851565995707 1048.5557602659412 2 525.2853881716728 MULTI CID FTMS 0 0 0 10995 8792667.0 0.7870705187468268 1 -0.0615158081054687 1 Unmodified _VPDTSRIYV_ ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT 29.081581746732265 0.1611639662936252 3 VPD[KS]{[QN]|[E{I|L}]|[KN]}YV 9 2 + 55.621 0.0 0.0 5.3046 5.3046 89.697 0.0 0.0 0.0 34.19469995980698 4.461499616092652 4.461499616092652 55.62137499549429 0 0.3252574989159953 1.3979400086720375 0.3494850021680094 0.0 VPD[KS]{[QN]|[E{I|L}]|[KN]}YV 5.3046 - 36 + 1 1.493 39942.3 1.0 5650 5344 10995 HBL1_DMSO_200M_050219_1,10996 HBL1_DMSO_200M_050219_1,10996,VPDTSRIYV False True VPDTSRIYV 57.108748 525.285388171673 522888720.0 10995.0 ENSG00000126756|ENST00000333119|UXT;;nc|ENSG00000126756|Q9UBK9-2|UXT 6.851260503133138 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10997 57.11 20.0 1746000.0 25 0 116700.0 + 38372 TQTAVITRI 9 61 501.8007163356199 1001.5868797380398 2 501.8009216189384 MULTI CID FTMS 0 0 0 10995 1547815.125 0.2949120593141275 1 -0.0615158081054687 2 Unmodified _TQTAVITRI_ ENSG00000101447|ENST00000619850|FAM83D;nc|ENSG00000101447|Q9H4H8-2|FAM83D 25.997395711884035 0.2004055669077203 3 [QT]TAV{I|L} 6 3 47.664 0.0 0.0 4.7588 0.0 0.0 0.0 385.2205294244751 385.2205294244751 35.0 0.0 0.0 0.0 0 0.9247425010840048 1.0 0.0 0.0 + [QT]TAV{I|L} 4.7588 + + 48 + 1 1.493 34024.8 1.0 5651 5344 10995 HBL1_DMSO_200M_050219_1,10997 HBL1_DMSO_200M_050219_1,10997,TQTAVITRI False True TQTAVITRI 57.109927 501.800921618938 72081728.0 10995.0 ENSG00000101447|ENST00000619850|FAM83D;;nc|ENSG00000101447|Q9H4H8-2|FAM83D 5.234521547953288 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10998 57.111 8.1 8271500.0 25 0 1272500.0 -1 SVALICLLW 9 56 358.87337622080014 1073.5982992626004 3 358.8732787966728 MULTI CID FTMS 0 0 0 10995 5691993.0 1.0 0 0.0 3 Carbamidomethyl (C) _SVALIC(Carbamidomethyl (C))LLW_ ENSG00000166428|ENST00000392593|PLD4 24.020572477871973 0.2255576514309169 3 SV{I|L}A 4 -1 56.186 0.0 0.0 5.2334 0.0 0.0 0.0 700.3549419098449 700.3549419098449 44.50318762307696 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 SV{I|L}A 5.2334 - 30 + 1 1.493 60797.2 1.0 5652 5344 10995 HBL1_DMSO_200M_050219_1,10998 HBL1_DMSO_200M_050219_1,10998,SVALICLLW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 10999 57.112 8.3 7748100.0 25 0 950490.0 + 22303 LPSEGGVRI 9 77 464.265758903784 926.516964874368 2 464.2661010622978 MULTI CID FTMS 0 0 0 10995 5195196.5 1.0 0 0.0 4 Unmodified _LPSEGGVRI_ ENSG00000169217|ENST00000305596|CD2BP2 17.11289562659939 0.3734572693229295 3 {I|L}PSEG 5 4 56.37 0.0 0.0 6.0841 0.0 0.0 0.0 440.26365076236567 440.26365076236567 34.48001329768807 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}PSEG 6.0841 + + 203 + 1 1.493 53995.4 1.0 5653 5344 10995 HBL1_DMSO_200M_050219_1,10999 HBL1_DMSO_200M_050219_1,10999,LPSEGGVRI False True LPSEGGVRI 57.112283 464.266101062298 37587828.0 10995.0 ENSG00000169217|ENST00000305596|CD2BP2 2.9622768561045327 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11000 57.113 11.0 5178000.0 25 0 897230.0 + 44628 YPFKPPKV 8 75 325.86048683472575 974.5596311043772 3 325.8601867556572 MULTI CID FTMS 0 0 0 10995 3887067.75 0.0503947099778593 -23 1.947467803955078 5 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 21.74664581756881 0.5868176546531598 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 57.803 0.0 0.0 5.9312 5.9312 91.454 0.0 0.0 0.0 25.9188256147155 6.682437647924218 6.682437647924218 38.6032911501178 0 0.25 1.3979400086720375 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]KPP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP]PV[RH]{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]K[HS]KV 5.9312;1.9701;1.3714;0.8582;0.70111 +;-;-;-;- + 243 + 1 1.493 52716.1 1.0 5654 5344 10995 HBL1_DMSO_200M_050219_1,11000 HBL1_DMSO_200M_050219_1,11000,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11001 57.115 17.0 2040900.0 25 0 211450.0 6518 EAKVLQLTV 9 72 500.8060879855689 999.597623037938 2 500.8058959841728 MULTI CID FTMS 0 0 0 10995 2096338.25 1.0 0 0.0 6 Unmodified _EAKVLQLTV_ ENSG00000179071|ENST00000316398|CCDC89 12.240655878213236 0.5053430591993562 3 {[QV]|[N{I|L}]|[RA]|[KV]}TAV{I|L} 6 7 39.697 0.0 0.0 3.9713 0.0 0.0 0.0 385.2225130670532 385.2225130670532 16.847365560341288 0.0 0.0 0.0 0 0.4247425010840047 0.8538719643217619 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}TAV{I|L} 3.9713 - 141 + 1 1.493 31151.3 1.0 5655 5344 10995 HBL1_DMSO_200M_050219_1,11001 HBL1_DMSO_200M_050219_1,11001,EAKVLQLTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11002 57.116 42.0 1237600.0 25 0 114650.0 + 32494 SALEKSLAV 9 85 459.2686656905872 916.5227784479744 2 459.2688781619072 MULTI CID FTMS 0 0 0 10995 939295.9375 0.864774433113648 1 -0.0615158081054687 7 Unmodified _SALEKSLAV_ ENSG00000136682|ENST00000259199|ZNG1B;ENSG00000147996|ENST00000382405|ZNG1E;ENSG00000172785|ENST00000356521|ZNG1A;ENSG00000196873|ENST00000360171|ZNG1C;ENSG00000215126|ENST00000377391|ZNG1F;ENST00000358604.7_1_2:114196636-114253317:+|nuORF;ENST00000377445.5_9:69238165-69262487:-|nuORF;ENST00000470192.1_9:69256791-69261296:-|nuORF;ENST00000476973.2_9:69243634-69261296:-|nuORF;ENST00000490323.5_1_2:114195445-114201441:+|nuORF;ENST00000492566.1_1_2:114195517-114220159:+|nuORF;ENST00000495626.2_9:69245151-69262487:-|nuORF;nc|ENSG00000172785|Q9BRT8-2|ZNG1A;nc|ENSG00000172785|Q9BRT8-3|ZNG1A;nc|ENSG00000172785|Q9BRT8-4|ZNG1A;nc|ENSG00000196873|Q5JTY5-2|ZNG1C;nc|ENSG00000215126|Q5RIA9-3|ZNG1E 43.77239144664712 0.0547478964384323 3 {[SA]|[TG]}VS{I|L}{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 6 + 53.425 0.0 0.0 5.8291 5.8291 75.607 0.0 0.0 0.0 9.172356950594676 26.50900915657068 9.172356950594676 0.329241303624741 0 0.5 2.0 1.055462187404089 0.0 {[SA]|[TG]}VS{I|L}{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{I|L}KE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}VS{I|L}A{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{I|L}[VS]{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{I|L}[VS]A{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{I|L}K[{M(Oxidation (M))|F}V][RP];[{I|L}A]SKE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}A]S[VS]{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}GS{I|L}{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}AKE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.8291;5.7932;5.3301;5.308;4.809;4.0244;3.9644;3.4792;3.2191;3.1832 -;-;-;-;-;-;-;-;-;- 365 1 1.493 46651.8 1.0 5656 5344 10995 HBL1_DMSO_200M_050219_1,11002 HBL1_DMSO_200M_050219_1,11002,SALEKSLAV True True SALEKSLAV 57.115825 459.268878161907 7807928.0 10995.0 nc|ENSG00000196873|Q5JTY5-2|ZNG1C;;ENST00000490323.5_1_2:114195445-114201441:+|nuORF;;nc|ENSG00000172785|Q9BRT8-3|ZNG1A;;ENST00000377445.5_9:69238165-69262487:-|nuORF;;ENST00000476973.2_9:69243634-69261296:-|nuORF;;nc|ENSG00000172785|Q9BRT8-2|ZNG1A;;ENSG00000215126|ENST00000377391|ZNG1F;;ENSG00000196873|ENST00000360171|ZNG1C;;ENST00000492566.1_1_2:114195517-114220159:+|nuORF;;nc|ENSG00000215126|Q5RIA9-3|ZNG1E;;nc|ENSG00000172785|Q9BRT8-4|ZNG1A;;ENSG00000136682|ENST00000259199|ZNG1B;;ENSG00000147996|ENST00000382405|ZNG1E;;ENST00000358604.7_1_2:114196636-114253317:+|nuORF;;ENST00000470192.1_9:69256791-69261296:-|nuORF;;ENST00000495626.2_9:69245151-69262487:-|nuORF;;ENSG00000172785|ENST00000356521|ZNG1A 5.099977970123291 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11003 57.117 62.0 755390.0 25 0 116910.0 + 2940 AVHEDIVAV 9 71 476.7585614522664 951.5025699713328 2 476.7589599490166 MULTI CID FTMS 0 0 0 10995 899989.9375 0.3133939226319255 1 -0.0615158081054687 8 Unmodified _AVHEDIVAV_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 42.09456458481378 0.0639583784996157 3 {[VA]|[{I|L}G]}HED{I|L}VAV 9 0 + 69.614 0.0 0.0 7.3162 7.3162 92.604 0.0 0.0 0.0 10.0 16.478174818886373 10.0 10.0 0 0.5 1.3979400086720375 0.0 0.0 + + {[VA]|[{I|L}G]}HED{I|L}VAV;{[YC]|[HE]}D{I|L}G{I|L}VAV;{[YC]|[HE]}D{I|L}VAVAV;{[YC]|[HE]}{[VA]|[{I|L}G]}D{I|L}VAV;{[VA]|[{I|L}G]}HE{[TV]|[{I|L}S]}[TP]V;{[YC]|[HE]}D{I|L}V[Q{I|L}]V;{[YC]|[HE]}{[RE]|[WV]}{I|L}[R{I|L}] 7.3162;6.2653;5.7638;4.611;3.1659;2.9033;1.0768 +;-;-;-;-;-;- + 144 1 1.493 41641.8 1.0 5657 5344 10995 HBL1_DMSO_200M_050219_1,11003 HBL1_DMSO_200M_050219_1,11003,AVHEDIVAV True True AVHEDIVAV 57.117345 476.758959949017 37038184.0 10995.0 nc|ENSG00000083520|Q9Y2L1-2|DIS3;;ENSG00000083520|ENST00000377767|DIS3 8.01615317662557 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11004 57.119 48.0 1638200.0 25 0 189740.0 -1 YPSMIDYT 8 95 503.2161876967028 1004.4178224602056 2 503.2163268923759 MULTI CID FTMS 0 0 0 10995 910378.8125 0.8537738215731552 -1 0.15032958984375 9 Oxidation (M) _YPSM(Oxidation (M))IDYT_ ENST00000341618.8_2_21:30547632-30547791:+|nuORF 9.347437153973935 0.7675937258251505 3 [YG]EN 4 -1 24.341 0.0 0.0 2.4234 0.0 0.0 0.0 538.2295542729424 538.2295542729424 7.685238507372741 0.0 0.0 0.0 0 0.0 2.0 0.2614393726401688 0.0 [YG]EN 2.4234 - 154 1 1.493 64979.2 1.0 5658 5344 10995 HBL1_DMSO_200M_050219_1,11004 HBL1_DMSO_200M_050219_1,11004,YPSMIDYT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11005 57.12 40.0 1913000.0 25 0 164500.0 + -1 SVYPNGHFV 9 93 510.2109998118952 509.2037233452952 1 510.2112609744072 MULTI CID FTMS 0 0 0 10995 810303.75 0.6137976575353672 -1 0.15032958984375 10 ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L;ENSG00000166938|ENST00000319212|DIS3L 3 [YE]A 3 -1 19.577 0.0 0.0 3.8447 0.0 0.0 0.0 143.0372554100014 143.0372554100014 6.389530984084221 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [YE]A 3.8447 - 65 1 1.493 64398.6 1.0 5659 5344 10995 HBL1_DMSO_200M_050219_1,11005 HBL1_DMSO_200M_050219_1,11005, False False SVYPNGHFV 57.11981 510.211260974407 9163132.0 10995.0 ENST00000564909.5_1_15:66585934-66618751:+|nuORF;;nc|ENSG00000166938|Q8TF46-2|DIS3L;;nc|ENSG00000166938|Q8TF46-3|DIS3L;;nc|ENSG00000166938|Q8TF46-4|DIS3L;;ENSG00000166938|ENST00000319212|DIS3L 1.9617459774017332 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11006 57.122 112.0 575550.0 25 0 40951.0 43520 WWWWIWWQWW 10 70 874.9044782998504 1747.7944036665008 2 874.9055663943291 MULTI CID FTMS 0 0 0 10995 616376.4375 0.1478509460849334 15 -1.30010986328125 11 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 3 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 8 53.434 0.0 0.0 3.0572 0.0 0.0 734.3700428693375 0.0 734.3700428693375 0.0 25.017346757967545 0.0 0.0 0 1.305462187404089 0.0 0.0 0.8494850021680094 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.0572 - 341 1 1.493 48150.8 1.0 5660 5344 10995 HBL1_DMSO_200M_050219_1,11006 HBL1_DMSO_200M_050219_1,11006,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 11007 57.127 248.0 449630.0 25 0 25227.0 -1 TLDCEKMD 8 146 506.209848992477 1010.405145051754 2 506.2104675173759 MULTI CID FTMS 0 0 0 10995 521202.90625 0.8516688293928687 2 -0.1870613098144531 12 Carbamidomethyl (C) _TLDC(Carbamidomethyl (C))EKMD_ ENSG00000166579|ENST00000334527|NDEL1;nc|ENSG00000166579|Q9GZM8-2|NDEL1;nc|ENSG00000166579|Q9GZM8-3|NDEL1 21.74664581756881 0.5868176546531598 3 [{I|L}T]DV 4 -1 43.06 0.0 0.0 4.2616 0.0 0.0 0.0 579.1566866510374 579.1566866510374 20.45777900482852 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.0 0.0 [{I|L}T]DV 4.2616 - 372 + 1 1.493 86850.9 1.0 5661 5344 10995 HBL1_DMSO_200M_050219_1,11007 HBL1_DMSO_200M_050219_1,11007,TLDCEKMD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11008 57.129 97.0 880050.0 25 0 120680.0 + 45504 YTSDHFETI 9 113 556.7480718493318 1111.4815907654636 2 556.7484008669853 MULTI CID FTMS 0 0 0 10995 496800.15625 1.0 0 0.0 13 Unmodified _YTSDHFETI_ ENSG00000136628|ENST00000366923|EPRS1 81.61307344734483 0.0171259190214613 3 TC{M(Oxidation (M))|F}ETYT{I|L} 8 6 65.787 0.0 0.0 5.9189 0.0 0.0 135.0688191144547 0.0 135.0688191144547 0.0 19.799865270327714 0.0 0.0 0 0.3494850021680094 0.0 1.4436726795685342 0.0 TC{M(Oxidation (M))|F}ETYT{I|L} 5.9189 - 1923 1 1.493 72493.2 1.0 5662 5344 10995 HBL1_DMSO_200M_050219_1,11008 HBL1_DMSO_200M_050219_1,11008,YTSDHFETI True True YTSDHFETI 57.128939 556.748400866985 4310050.5 10995.0 ENSG00000136628|ENST00000366923|EPRS1 6.504087130228679 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11009 57.131 122.0 425170.0 25 0 38824.0 -1 LMMPYFCL 8 95 553.7406959658325 1105.466838998465 2 553.7416869997978 MULTI CID FTMS 0 0 0 10995 465177.5625 0.7428157019204437 -2 0.2326469421386718 14 Carbamidomethyl (C),2 Oxidation (M) _LM(Oxidation (M))M(Oxidation (M))PYFC(Carbamidomethyl (C))L_ ENSG00000139514|ENST00000380752|SLC7A1 11.114462752807354 0.7467182956244686 3 YP 2 -1 37.307 0.0 0.0 3.3748 0.0 0.0 0.0 842.3325289361936 842.3325289361936 8.406206186877938 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 YP 3.3748 - 343 + 1 1.493 45477.4 1.0 5663 5344 10995 HBL1_DMSO_200M_050219_1,11009 HBL1_DMSO_200M_050219_1,11009,LMMPYFCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11010 57.134 142.0 662560.0 25 0 124620.0 + 15384 IPNRIPKI 8 107 317.5431911443037 949.6077440331112 3 317.5430480837822 MULTI CID FTMS 0 0 0 10995 425592.5625 0.3732116128629156 -2 0.2326469421386718 15 Unmodified _IPNRIPKI_ ENSG00000164323|ENST00000458385|CFAP97;nc|ENSG00000164323|Q9P2B7-2|CFAP97 36.12702656103203 0.299085846329477 3 {I|L}PNR{I|L}PK{I|L} 8 0 + 27.745 0.0 0.0 2.9218 2.9218 79.329 0.0 0.0 0.0 11.547378476007776 4.456772285962671 4.456772285962671 9.262137858390812 0 0.3935078169319297 0.0 0.0 0.4247425010840047 + + {I|L}PNR{I|L}PK{I|L};{I|L}PGGR{I|L}PK{I|L};{I|L}PNR{I|L}{I|L}[KP];{I|L}PGGR{I|L}{I|L}[KP] 2.9218;1.9464;1.7128;0.73741 +;-;-;- + 161 + 1 1.493 77795.4 1.0 5664 5344 10995 HBL1_DMSO_200M_050219_1,11010 HBL1_DMSO_200M_050219_1,11010,IPNRIPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11011 57.139 232.0 531820.0 25 0 30519.0 -1 GVGVGGSCCQC 11 146 513.6929576447088 1025.3713623562176 2 513.6926757693291 MULTI CID FTMS 0 0 0 10995 411181.5 0.7643291145328863 2 -0.1870613098144531 16 Carbamidomethyl (C) _GVGVGGSC(Carbamidomethyl (C))CQC_ ENST00000589009.5_1_19:10227257-10229639:-|nuORF 8.155526934196011 0.8366696279279818 3 [AG]{I|L}NA{I|L}KV 8 -1 38.451 0.0 0.0 3.75 0.0 0.0 0.0 255.8760884065101 255.8760884065101 23.61439217351541 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 1.341129063296272 [AG]{I|L}NA{I|L}KV 3.75 - 819 1 1.493 95981.1 1.0 5665 5344 10995 HBL1_DMSO_200M_050219_1,11011 HBL1_DMSO_200M_050219_1,11011,GVGVGGSCCQC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11012 57.144 287.0 404940.0 25 0 64755.0 22393 LPSTARLL 8 134 435.7739847491253 0 435.7742187380791 PEAK CID FTMS 0 0 0 10995 273747.25 0.297759912003584 1 -0.0615158081054687 17 Unmodified _LPSTARLL_ ENST00000403766.7_1_13:100037683-100037752:+|nuORF 26.88365393820708 0.2878692218834006 3 P 1 7 8.3718 0.0 0.0 0.96279 0.0 0.0 113.08347296430324 656.375680594575 769.4591535588783 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 + P 0.96279 + + 204 + 1 1.493 92574.6 1.0 5666 5344 10995 HBL1_DMSO_200M_050219_1,11012 HBL1_DMSO_200M_050219_1,11012,LPSTARLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11013 57.15 317.0 491650.0 25 0 53476.0 + 26625 NVVDHIKGLET 11 137 408.890793182712 1223.650550148336 3 408.8910400271416 MULTI CID FTMS 0 0 0 10995 281386.90625 0.7736006959706079 -2 0.2326469421386718 18 Unmodified _NVVDHIKGLET_ ENSG00000111300|ENST00000261745|NAA25 37.07464296494664 0.257459615863268 3 {[NV]|[RG]}V{M(Oxidation (M))|F}T[KA]{I|L}[W{M(Oxidation (M))|F}] 10 6 + 26.945 0.0 0.0 2.202 2.202 73.361 0.0 0.0 0.0 6.460668059117065 1.5735442236229602 1.5735442236229602 4.899342049956861 0 0.2887254899964357 0.0 0.7614393726401688 0.0 {[NV]|[RG]}V{M(Oxidation (M))|F}T[KA]{I|L}[W{M(Oxidation (M))|F}];{[NV]|[RG]}{M(Oxidation (M))|F}VT[KA]{I|L}[W{M(Oxidation (M))|F}];{[NV]|[RG]}PP{I|L}VVPG[W{M(Oxidation (M))|F}];{[NV]|[RG]}V{M(Oxidation (M))|F}TRR[W{M(Oxidation (M))|F}];{[NV]|[RG]}VDH{I|L}[R{I|L}]C(Carbamidomethyl (C))V;{[NV]|[RG]}{M(Oxidation (M))|F}TV[KA]{I|L}[W{M(Oxidation (M))|F}];{[NV]|[RG]}{M(Oxidation (M))|F}VTRR[W{M(Oxidation (M))|F}];{[NV]|[RG]}V[H{I|L}]RPG[W{M(Oxidation (M))|F}];{[NV]|[RG]}V{M(Oxidation (M))|F}[RH][K{I|L}][DP];[HD]V{I|L}[KA]EVTNV 2.202;1.8016;1.6798;1.6682;1.6579;1.5556;1.2678;1.1733;1.1585;1.0628 -;-;-;-;-;-;-;-;-;- 1870 + 1 1.493 125796.8 1.0 5667 5344 10995 HBL1_DMSO_200M_050219_1,11013 HBL1_DMSO_200M_050219_1,11013,NVVDHIKGLET False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11014 57.155 267.0 355750.0 25 0 27484.0 -1 MFPKTRVMI 9 119 380.2077124901846 1137.6013080707537 3 380.2073852419853 MULTI CID FTMS 0 0 0 10995 264755.34375 1.0 0 0.0 19 Oxidation (M) _MFPKTRVM(Oxidation (M))I_ ENST00000373696.7_1_X:70823497-70824427:+|nuORF 13.614867670302877 0.4681447649821485 3 MP[VP]PV[HS]K{M(Oxidation (M))|F} 10 -1 + 32.33 0.0 0.0 2.8419 2.8419 69.406 0.0 0.0 0.0 18.350162448297667 2.098032252484874 2.098032252484874 1.76091259055681 0 0.0 0.0 0.4247425010840047 0.0 MP[VP]PV[HS]K{M(Oxidation (M))|F};MP[RH]V[HS]K{M(Oxidation (M))|F};M[YV]KV[HS]K{M(Oxidation (M))|F};[KP][YE]VKP{M(Oxidation (M))|F}M;M[RH]PV[HS]K{M(Oxidation (M))|F};[KP][YE]VPK{M(Oxidation (M))|F}M;MP[VP]PVH[HK]P;[KP][{I|L}T]AAYP{M(Oxidation (M))|F}M;MP[RH]VH[HK]P;M[YV]KVH[HK]P 2.8419;2.6871;2.6763;2.3725;2.2677;1.9639;1.461;1.4533;1.3063;1.0416 -;-;-;-;-;-;-;-;-;- 333 + 1 1.493 84099.2 1.0 5668 5344 10995 HBL1_DMSO_200M_050219_1,11014 HBL1_DMSO_200M_050219_1,11014,MFPKTRVMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11015 57.166 647.0 336480.0 25 0 80221.0 -1 0 173 591.817351091449 2363.240298499396 4 592.3170654177666 MULTI CID FTMS 0 0 0 -1 0 20 3 Y 1 -1 13.099 0.0 0.0 0.55428 0.0 0.0 2182.165986220879 0.0 2182.165986220879 0.0 2.53051074007686 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.55428 - 122 + 1 1.493 162126.2 1.0 5669 5344 10995 HBL1_DMSO_200M_050219_1,11015 HBL1_DMSO_200M_050219_1,11015, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11017 57.17 6.9 7067000.0 25 0 934310.0 + 32635 SAYLVAEKV 9 76 490.2767279475564 978.5389029619128 2 490.2767822146416 MULTI CID FTMS 0 0 0 11016 6518585.0 0.8063737892412448 1 -0.1255455017089843 1 Unmodified _SAYLVAEKV_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P 36.506200033944 0.094635877243972 3 {[SA]|[TG]}Y{I|L}VAEKV 9 0 {[SA]|[TG]}Y + + 44.858 20.458 6.3705 4.5842 4.5842 54.273 0.0 0.0 0.0 0.0 21.18562527100117 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 + + {[SA]|[TG]}Y{I|L}VAEKV 4.5842 + + 153 + 1 1.493 43605.4 1.0 5670 5345 11016 HBL1_DMSO_200M_050219_1,11017 HBL1_DMSO_200M_050219_1,11017,SAYLVAEKV True True SAYLVAEKV 57.170264 490.276782214642 130064208.0 11016.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENSG00000080824|ENST00000216281|HSP90AA1;;nc|ENSG00000282100|Q58FF6|HSP90AB4P 6.818436622619629 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11018 57.171 11.0 4089000.0 25 0 849320.0 + 4590 DAYSSFRSV 9 60 516.2430073714669 1030.4714618097337 2 516.2435790896416 MULTI CID FTMS 0 0 0 11016 4374586.0 0.6674985121003757 1 -0.1255455017089843 2 Unmodified _DAYSSFRSV_ ENSG00000143337|ENST00000606911|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-4|TOR1AIP1 43.77239144664712 0.0547478964384323 3 {[DA]|[EG]}YSS{M(Oxidation (M))|F} 6 3 61.036 0.0 0.0 5.9231 0.0 0.0 0.0 357.18906580142817 357.18906580142817 40.066504924811625 0.0 0.0 0.0 0 0.7134679910804405 1.6989700043360187 0.8494850021680094 0.0 + {[DA]|[EG]}YSS{M(Oxidation (M))|F} 5.9231 + + 44 + 1 1.493 39465.4 1.0 5671 5345 11016 HBL1_DMSO_200M_050219_1,11018 HBL1_DMSO_200M_050219_1,11018,DAYSSFRSV True True DAYSSFRSV 57.171443 516.243579089642 103815552.0 11016.0 ENSG00000143337|ENST00000606911|TOR1AIP1;;nc|ENSG00000143337|Q5JTV8-4|TOR1AIP1;;nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1 4.777576446533203 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11019 57.173 14.0 2209800.0 25 0 160860.0 + 26695 NYNPAQQAF 9 69 526.7435222907668 1051.4724916483335 2 526.7436401247978 MULTI CID FTMS 0 0 0 11016 3049809.75 0.4664160989353197 -1 0.0615158081054687 3 Unmodified _NYNPAQQAF_ ENSG00000111596|ENST00000229195|CNOT2;nc|ENSG00000111596|Q9NZN8-2|CNOT2;nc|ENSG00000111596|Q9NZN8-3|CNOT2;nc|ENSG00000111596|Q9NZN8-5|CNOT2 30.22481116460888 0.1466181017706357 3 [YN]N 3 6 30.335 0.0 0.0 2.885 0.0 0.0 0.0 657.2996150216335 657.2996150216335 10.870579697170635 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.2887254899964357 + [YN]N 2.885 + + 84 1 1.493 30941.1 1.0 5672 5345 11016 HBL1_DMSO_200M_050219_1,11019 HBL1_DMSO_200M_050219_1,11019,NYNPAQQAF False True NYNPAQQAF 57.172622 526.7446 37791348.0 11016.0 ENSG00000111596|ENST00000229195|CNOT2;;nc|ENSG00000111596|Q9NZN8-3|CNOT2;;nc|ENSG00000111596|Q9NZN8-2|CNOT2;;nc|ENSG00000111596|Q9NZN8-5|CNOT2 7.464894612630208 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11020 57.174 66.0 1038200.0 25 0 97715.0 + 20144 LKPGILPVPK 10 106 531.3576376837972 1060.7007224343945 2 531.3578369021416 MULTI CID FTMS 0 0 0 11016 972723.625 0.263214223018373 3 -0.3172645568847656 4 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 14.95716135407024 0.5965753712453801 3 K{I|L}AP{I|L}VKD{I|L} 9 -1 77.164 0.0 0.0 7.2748 0.0 0.0 0.0 80.05135523013905 80.05135523013905 53.21887425979199 0.0 0.0 0.0 0 2.1307196863200843 0.0 0.6549471895720985 0.0 K{I|L}AP{I|L}VKD{I|L} 7.2748 - 459 + 1 1.493 60759.5 1.0 5673 5345 11016 HBL1_DMSO_200M_050219_1,11020 HBL1_DMSO_200M_050219_1,11020,LKPGILPVPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11021 57.176 84.0 715320.0 25 0 82859.0 + 18177 KTTTIAVEV 9 89 481.2823094913325 960.550066049465 2 481.2822448611259 MULTI CID FTMS 0 0 0 11016 725653.125 0.2690859857941085 -1 0.0615158081054687 5 Unmodified _KTTTIAVEV_ ENSG00000115677|ENST00000310931|HDLBP;ENST00000470710.1_1_2:242194755-242195742:-|nuORF 30.63653989081413 0.1413794767160703 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RK]AVEV 8 5 + 33.698 0.0 0.0 3.5082 3.5082 82.422 0.0 0.0 0.0 3.010592250701613 11.127567577241551 3.010592250701613 16.63407036755018 0 0.6435078169319297 1.0969100130080565 1.0941876774005248 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RK]AVEV;{NN|[MP]|[D{I|L}]|[EV]}[KG]{I|L}AV[{M(Oxidation (M))|F}V] 3.5082;1.7765 -;- 137 1 1.493 52106.1 1.0 5674 5345 11016 HBL1_DMSO_200M_050219_1,11021 HBL1_DMSO_200M_050219_1,11021,KTTTIAVEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11022 57.177 47.0 1411000.0 25 0 122590.0 + + 43898 FYPAKVTAV 9 85 498.2821870274149 994.54982112163 2 498.2820007205009 MULTI CID FTMS 0 0 0 11016 657865.9375 0.4867822418134039 -1 0.0615158081054687 6 Unmodified _YFVKDKPV_ ENSG00000025293|ENST00000374012|PHF20;nc|ENSG00000025293|Q9BVI0-2|PHF20;ENST00000481202.5_1_20:34389438-34450945:+|nuORF 14.581692164780916 0.6954967302934248 3 [PA]KVTA 6 -1 24.357 0.0 0.0 2.4491 0.0 0.0 0.0 424.1874098115636 424.1874098115636 6.297576668501055 0.0 0.0 0.0 0 0.0 0.4685210829577448 0.6307196863200843 0.0 [PA]KVTA 2.4491 - 80 1 1.493 56812.0 1.0 5675 5345 11016 HBL1_DMSO_200M_050219_1,11022 HBL1_DMSO_200M_050219_1,11022,YFVKDKPV False False FYPAKVTAV 57.177366 498.282000720501 7003609.5 11016.0 ENSG00000025293|ENST00000374012|PHF20;;nc|ENSG00000025293|Q9BVI0-2|PHF20;;ENST00000481202.5_1_20:34389438-34450945:+|nuORF 4.73103396097819 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11023 57.179 65.0 857620.0 25 0 83438.0 18776 LAPASPGVTP 10 92 455.2557361064309 908.4969192796618 2 455.2559387087822 MULTI CID FTMS 0 0 0 11016 621779.4375 0.0283402096014226 12 -1.1498527526855469 7 Unmodified _LAPASPGVTP_ ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-3|TACC2 34.10243960390752 0.2198439752719791 3 [PG]VAPTA 7 7 14.847 0.0 0.0 1.6342 0.0 0.0 0.0 312.1588204849931 312.1588204849931 -0.5514365591666834 0.0 -0.5514365591666834 0.0 0 0.3807196863200844 0.5686362358410126 0.5 0.0 [PG]VAPTA 1.6342 - 262 1 1.493 49594.9 1.0 5676 5345 11016 HBL1_DMSO_200M_050219_1,11023 HBL1_DMSO_200M_050219_1,11023,LAPASPGVTP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11024 57.183 186.0 662650.0 25 0 35257.0 + 39971 KVIAQQVQL 9 129 513.8191430705094 1025.6237332078188 2 513.8194457888603 MULTI CID FTMS 0 0 0 11016 569597.125 0.4684368903314705 -1 0.0615158081054687 8 Unmodified _VGAQALKNLL_ ENSG00000090447|ENST00000204517|TFAP4 52.268347100219714 0.0668375294751462 3 [AG]{I|L}NA{I|L}KVQ{I|L} 10 5 + 74.611 0.0 0.0 7.2747 7.2747 85.203 0.0 0.0 0.0 3.3891076255521853 16.53212513775344 3.3891076255521853 3.3891076255521853 0 0.7059771852360797 1.5228787452803376 0.0 1.673877368056628 [AG]{I|L}NA{I|L}KVQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QA{I|L}KVQ{I|L};[AG]{I|L}AN{I|L}KVQ{I|L};[AG]QVA{I|L}KVQ{I|L};[AG]VQA{I|L}KVQ{I|L};{[VA]|[{I|L}G]}ANA{I|L}KVQ{I|L};[AG]QAV{I|L}KVQ{I|L};[AG]{I|L}N{I|L}AKVQ{I|L};[Q{I|L}]NA{I|L}KVQ{I|L};[AG]{I|L}NA{I|L}KV[AG]{I|L} 7.2747;6.9442;6.7622;6.6975;6.6876;6.6799;6.6502;6.5833;6.5527;6.3811 -;-;-;-;-;-;-;-;-;- 3565 1 1.493 97774.6 1.0 5677 5345 11016 HBL1_DMSO_200M_050219_1,11024 HBL1_DMSO_200M_050219_1,11024,VGAQALKNLL True False KVIAQQVQL 57.182524 513.81944578886 12974960.0 11016.0 ENSG00000090447|ENST00000204517|TFAP4 5.091376781463623 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11025 57.184 55.0 1238800.0 25 0 108710.0 + 19697 LGLTNQPEL 9 112 492.77147364149215 983.5283943497844 2 492.7710449099541 MULTI CID FTMS 0 0 0 11016 572712.3125 0.0217587331872093 -5 0.45654296875 9 Unmodified _LGLTNQPEL_ ENSG00000179626|ENST00000641569|OR6C4 48.345845343767074 0.0439967357579942 3 {[VA]|[{I|L}G]}{I|L}TNQ 6 3 35.155 0.0 0.0 3.5744 0.0 0.0 0.0 354.1655152816781 354.1655152816781 12.479334554485249 0.0 0.0 0.0 0 0.5 2.0 0.3054621874040891 0.4247425010840047 + {[VA]|[{I|L}G]}{I|L}TNQ 3.5744 + + 403 1 1.493 57321.1 1.0 5678 5345 11016 HBL1_DMSO_200M_050219_1,11025 HBL1_DMSO_200M_050219_1,11025,LGLTNQPEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11026 57.194 567.0 287650.0 25 0 28756.0 + 45377 YSWSGFKMTC 10 178 605.2551720006488 1208.4957910680976 2 605.2548705935478 MULTI CID FTMS 0 0 0 11016 341572.625 0.562127318835027 -1 0.0615158081054687 10 Unmodified _YSWSGFKMTC_ REV__ENSG00000080644|ENST00000326828|CHRNA3;REV__nc|ENSG00000080644|P32297-1|CHRNA3;REV__nc|ENSG00000080644|P32297-3|CHRNA3 23.80106514851385 0.4339316747945569 3 TC(Carbamidomethyl (C))NT{M(Oxidation (M))|F}{I|L}CCE 9 -1 60.689 0.0 0.0 5.0219 0.0 0.0 119.07403762031406 0.0 119.07403762031406 0.0 24.697573854007032 0.0 0.0 0 0.7614393726401688 0.0 1.0501648626366045 0.6989700043360187 TC(Carbamidomethyl (C))NT{M(Oxidation (M))|F}{I|L}CCE 5.0219 - 5855 1 1.493 120780.1 1.0 5679 5345 11016 HBL1_DMSO_200M_050219_1,11026 HBL1_DMSO_200M_050219_1,11026,YSWSGFKMTC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11027 57.204 578.0 715720.0 25 0 60117.0 + -1 NYCNSSQAF 9 178 545.7170090907384 1089.4194652482768 2 545.7177612185478 MULTI CID FTMS 0 0 0 11016 314976.125 1.0 0 0.0 11 Carbamidomethyl (C) _NYC(Carbamidomethyl (C))NSSQAF_ REV__ENSG00000187605|ENST00000409262|TET3;REV__nc|ENSG00000187605|O43151-2|TET3 18.1463463914782 0.3454829746528889 3 NYN 3 -1 38.203 0.0 0.0 3.5068 0.0 0.0 0.0 695.2505710326942 695.2505710326942 -0.0263964604130322 0.0 -0.0263964604130322 0.0 0 0.5283773187068795 1.3979400086720375 0.0 0.4247425010840047 NYN 3.5068 - 3778 + 1 1.493 308217.6 1.0 5680 5345 11016 HBL1_DMSO_200M_050219_1,11027 HBL1_DMSO_200M_050219_1,11027,NYCNSSQAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11028 57.206 117.0 577710.0 25 0 71150.0 + 34603 SPIVSPRI 8 95 434.76624372923766 867.5179345252753 2 434.7661315798759 MULTI CID FTMS 0 0 0 11016 301380.28125 0.2757720223148385 -3 0.2941627502441406 12 Unmodified _SPIVSPRI_ ENSG00000112029|ENST00000229758|FBXO5;nc|ENSG00000112029|Q9UKT4-2|FBXO5 21.53697664764585 0.591232569029014 3 SP{I|L}V{I|L} 5 3 64.38 0.0 0.0 7.4212 0.0 0.0 0.0 355.17365442447505 355.17365442447505 52.78659694992122 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 SP{I|L}V{I|L} 7.4212 - 167 + 1 1.493 59241.6 1.0 5681 5345 11016 HBL1_DMSO_200M_050219_1,11028 HBL1_DMSO_200M_050219_1,11028,SPIVSPRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11029 57.22 800.0 73830.0 25 0 16238.0 -1 0 36 1136.8087673941232 3407.404472782569 3 1137.810961902142 MULTI CID FTMS 0 0 0 11016 209911.875 0.6892641847937845 3 -0.3172645568847656 13 3 C(Carbamidomethyl (C)){M(Oxidation (M))|F}Y 3 -1 13.188 0.0 0.0 0.38703 0.0 0.0 1311.4731499186812 1622.7632540338502 2934.2364039525314 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){M(Oxidation (M))|F}Y 0.38703 - 10 + 1 1.493 55836.9 0.8700000047683716 5682 5345 11016 HBL1_DMSO_200M_050219_1,11029 HBL1_DMSO_200M_050219_1,11029, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11030 57.233 708.0 235310.0 25 0 12634.0 + -1 DAPVALVVHM 10 179 533.2779532123029 1064.5413534914055 2 534.2809936404228 MULTI CID FTMS 0 0 0 11016 210847.609375 0.6044315298753651 2 -0.1689529418945312 14 Oxidation (M) _VTNLHVVHM(Oxidation (M))_ ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-4|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;ENSG00000006744|ENST00000338034|ELAC2;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 13.50788311687929 0.4710407108020397 3 PVA{I|L}VVH{M(Oxidation (M))|F} 8 -1 44.334 0.0 0.0 4.1646 0.0 0.0 184.05599791343823 0.0 184.05599791343823 0.0 -1.249387366082999 -1.249387366082999 0.0 0 0.0 0.0 0.0 0.0 PVA{I|L}VVH{M(Oxidation (M))|F} 4.1646 - 940 + 1 1.493 131991.1 1.0 5683 5345 11016 HBL1_DMSO_200M_050219_1,11030 HBL1_DMSO_200M_050219_1,11030,VTNLHVVHM False False DAPVALVVHM 57.232591 534.280993640423 3748036.5 11016.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 8.168118635813395 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11031 57.245 729.0 206010.0 25 0 19214.0 + 26626 NVVDHIKGLET 11 141 612.8321166841627 1223.6496804351252 2 612.8337890505791 MULTI CID FTMS 0 0 0 11016 191517.390625 0.7262895060340668 -1 0.0615158081054687 15 Unmodified _NVVDHIKGLET_ ENSG00000111300|ENST00000261745|NAA25 59.17704102725264 0.0724851133754991 3 {[NV]|[RG]}VDH{I|L}KG{I|L}ET 11 0 + 41.985 0.0 0.0 3.4311 3.4311 71.581 0.0 0.0 0.0 2.2546510755176072 2.5838075853591675 2.2546510755176072 2.2546510755176072 0 2.024227503252014 0.0 0.0 0.1344005005252609 + + {[NV]|[RG]}VDH{I|L}KG{I|L}ET;[{I|L}A]QDH{I|L}KG{I|L}ET;{[NV]|[RG]}V[HS]{I|L}{I|L}ETVN;{[NV]|[RG]}VDH{I|L}[{I|L}T]TVN;[{I|L}A]Q[HS]{I|L}{I|L}ETVN;[{I|L}A]QDH{I|L}[{I|L}T]TVN;{[NV]|[RG]}V[HS]{I|L}{I|L}MVVN;{[NV]|[RG]}V[HS]{I|L}{I|L}TEVN;[{I|L}A]Q[HS]{I|L}{I|L}MVVN;{[NV]|[RG]}VDH{I|L}KG[KT]N 3.4311;3.2468;3.2199;3.1375;3.0357;2.9533;2.8401;2.738;2.6558;2.5764 +;-;-;-;-;-;-;-;-;- + 7434 1 1.493 112587.9 1.0 5684 5345 11016 HBL1_DMSO_200M_050219_1,11031 HBL1_DMSO_200M_050219_1,11031,NVVDHIKGLET True True NVVDHIKGLET 57.245251 612.833789050579 4591758.875 11016.0 ENSG00000111300|ENST00000261745|NAA25 8.099590142567953 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11032 57.261 800.0 170150.0 25 0 21539.0 + 13143 HFPMQSREF 9 127 589.774429041267 1177.534305149334 2 589.7747680544853 MULTI CID FTMS 0 0 0 11016 158823.296875 0.3963572781480127 5 -0.4858055114746094 16 Unmodified _HFKCNECGKL_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 22.736283301280096 0.4578556481593033 3 H{M(Oxidation (M))|F}PM 4 8 36.23 0.0 0.0 3.0768 0.0 0.0 0.0 662.2884005182249 662.2884005182249 6.906814518019395 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 H{M(Oxidation (M))|F}PM 3.0768 - 682 + 1 1.493 103376.1 0.9800000190734864 5685 5345 11016 HBL1_DMSO_200M_050219_1,11032 HBL1_DMSO_200M_050219_1,11032,HFKCNECGKL False False HFPMQSREF 57.260549 589.774768054485 4634895.0 11016.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 3.0625336170196533 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11033 57.265 249.0 353790.0 25 0 25914.0 -1 IYQPAMSAFL 10 126 578.7872264530653 1155.5598999729305 2 578.7902099490166 MULTI CID FTMS 0 0 0 11016 127984.40625 0.3672795973206845 -1 0.0615158081054687 17 Oxidation (M) _IYQPAM(Oxidation (M))SAFL_ ENST00000307790.7_3_22:30184749-30184881:-|nuORF 14.838274106304384 0.5985701837916485 3 [Y{I|L}]Q[HK]YA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 9 -1 + 24.841 0.0 0.0 2.1497 2.1497 71.459 0.0 0.0 0.0 3.467874862246571 0.7378621416091917 0.7378621416091917 3.467874862246571 0 0.0 2.0 0.0 0.0 [Y{I|L}]Q[HK]YA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[EP]R{[WT]|[RM]}YA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[EP]R{[MG]|[TS]}VYA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[HD]E{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{[VA]|[{I|L}G]}S{I|L};[Y{I|L}][AG][HK]YA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[VP]KE{[ES]|[DT]|[{I|L}C]}YA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}[KC]PVYA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[HD]AY[HK]WS{I|L};[VP]W{[WT]|[RM]}YA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[HD]AYVPP[MN]{I|L} 2.1497;1.8496;1.7414;1.4452;1.3528;1.2889;1.1818;1.068;0.98417;0.92791 -;-;-;-;-;-;-;-;-;- 784 1 1.493 75646.0 1.0 5686 5345 11016 HBL1_DMSO_200M_050219_1,11033 HBL1_DMSO_200M_050219_1,11033,IYQPAMSAFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11034 57.272 355.0 636700.0 25 0 96514.0 -1 0 186 340.24809678383065 0 340.4760619997978 PEAK CID FTMS 0 0 0 -1 0 18 3 G 1 -1 5.4846 0.0 0.0 0.80836 0.0 0.0 486.3913218862176 132.04587732486564 618.4371992110832 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.80836 - 4 + 1 1.493 179368.1 1.0 5687 5345 11016 HBL1_DMSO_200M_050219_1,11034 HBL1_DMSO_200M_050219_1,11034, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11035 57.285 800.0 139830.0 25 0 7449.2 + 29786 QPYQPLREV 9 144 565.3053830580116 0 565.3047973513603 PEAK CID FTMS 0 0 0 11016 107071.90625 1.0 0 0.0 19 Unmodified _QPYQPLREV_ ENSG00000123352|ENST00000552918|SPATS2;ENST00000547003.1_1_12:49916566-49919899:+|nuORF;ENST00000549412.5_2_12:49906680-49920035:+|nuORF 23.78978130925829 0.1667157386347964 3 YQV 3 6 19.126 0.0 0.0 1.6947 0.0 0.0 225.1132794787589 510.2699679010375 735.3832473797963 0.0 0.0 0.0 0.0 0 0.6462566630072955 0.0 0.0 0.4247425010840047 YQV 1.6947 - 177 + 1 1.493 90661.6 0.8399999737739563 5688 5345 11016 HBL1_DMSO_200M_050219_1,11035 HBL1_DMSO_200M_050219_1,11035,QPYQPLREV False True QPYQPLREV 57.285426 565.30479735136 14866725.0 11016.0 ENSG00000123352|ENST00000552918|SPATS2;;ENST00000547003.1_1_12:49916566-49919899:+|nuORF;;ENST00000549412.5_2_12:49906680-49920035:+|nuORF 4.506527423858643 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11036 57.292 274.0 228740.0 25 0 16748.0 + 39455 VAPPAPAGY 9 105 421.7237693964148 841.4329858596296 2 421.7230407595634 MULTI CID FTMS 0 0 0 11016 99154.7890625 0.4024314740294067 -1 0.0615158081054687 20 Unmodified _VAPPAPAGY_ REV__ENSG00000079432|ENST00000681038|CIC;REV__nc|ENSG00000079432|Q96RK0-2|CIC 5.230669730166228 0.7320841359114558 3 [YR]{I|L}VEY 6 -1 + 50.208 0.0 0.0 5.967 5.967 91.833 0.0 0.0 0.0 12.032796692927263 39.23902187720806 12.032796692927263 50.20812200728862 0 0.7742275032520141 0.0 0.0 0.7059771852360797 [YR]{I|L}VEY 5.967 - 62 1 1.493 56107.9 1.0 5689 5345 11016 HBL1_DMSO_200M_050219_1,11036 HBL1_DMSO_200M_050219_1,11036,VAPPAPAGY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11038 57.296 11.0 2062700.0 25 0 499510.0 + 7703 ELAFFICFL 9 45 368.194404519104 1101.5613841575118 3 368.1942321658134 MULTI CID FTMS 0 0 0 11037 4449287.5 0.2519672734406165 35 -2.984699249267578 1 Unmodified _ELAFFICFL_ REV__ENST00000300146.9_1_11:59405566-59405851:-|nuORF 4.3292370932331545 0.7635526921153418 3 {I|L} 1 -1 13.495 0.0 0.0 1.2251 0.0 0.0 970.4664725137604 0.0 970.4664725137604 0.0 -7.474250108400469 -7.474250108400469 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2251 + + 6 + 1 1.484 27718.8 1.0 5690 5346 11037 HBL1_DMSO_200M_050219_1,11038 HBL1_DMSO_200M_050219_1,11038,ELAFFICFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11039 57.297 7.7 2538400.0 25 0 266390.0 + 5806 DPPYSRVI 8 43 473.7532497189813 945.4919465047626 2 473.7534057497978 MULTI CID FTMS 0 0 0 11037 4154097.75 1.0 0 0.0 2 Unmodified _DPPYSRVI_ ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2 10.073929032068715 0.7620901558688216 3 [DP]PY 4 4 40.445 0.0 0.0 4.2777 0.0 0.0 0.0 470.2714937799438 470.2714937799438 29.960762528683706 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [DP]PY 4.2777 + + 8 + 1 1.484 23390.1 1.0 5691 5346 11037 HBL1_DMSO_200M_050219_1,11039 HBL1_DMSO_200M_050219_1,11039,DPPYSRVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11040 57.298 7.7 4829000.0 25 0 422990.0 + 44642 YPFKPPKV 8 69 488.2869567505858 974.5593605679716 2 488.2869750857353 MULTI CID FTMS 0 0 0 11037 6071764.5 0.1789269535974199 -19 1.6275405883789062 3 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 23.1484247019978 0.5573009939494978 3 YP{M(Oxidation (M))|F}K 4 4 52.735 0.0 0.0 5.4112 0.0 0.0 0.0 436.25744813319454 436.25744813319454 42.25054710168188 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + YP{M(Oxidation (M))|F}K 5.4112 + + 33 + 1 1.484 33998.2 1.0 5692 5346 11037 HBL1_DMSO_200M_050219_1,11040 HBL1_DMSO_200M_050219_1,11040,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11041 57.299 6.7 4100300.0 25 0 266770.0 + 1522 ALIQQATTV 9 56 472.7743720329387 943.5341911326774 2 472.7744018435478 MULTI CID FTMS 0 0 0 11037 5754547.5 1.0 0 0.0 4 Unmodified _ALIQQATTV_ ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENST00000475906.1_1_14:35732014-35732239:+|nuORF;ENST00000511643.5_1_4:39456165-39456631:-|nuORF;ENST00000561773.1_1_15:66671752-66672088:-|nuORF 18.13498045792455 0.3457906370836843 3 PY[RV]TV 6 7 20.125 0.0 0.0 2.1329 0.0 0.0 210.12014191568363 0.0 210.12014191568363 0.0 -0.7905871926422492 -0.7905871926422492 0.0 0 0.0 0.0 0.25 0.0 PY[RV]TV 2.1329 - 27 + 1 1.484 30112.0 1.0 5693 5346 11037 HBL1_DMSO_200M_050219_1,11041 HBL1_DMSO_200M_050219_1,11041,ALIQQATTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11042 57.301 8.2 2624100.0 25 0 179580.0 + 14824 ILFGHNTI 8 58 457.7566782260564 913.4988035189128 2 457.7563659548759 MULTI CID FTMS 0 0 0 11037 5634379.0 1.0 0 0.0 5 Unmodified _ILFGHNTI_ REV__ENSG00000132256|ENST00000380034|TRIM5 14.581692164780916 0.6954967302934248 3 VGNT{I|L} 5 -1 28.654 0.0 0.0 3.1367 0.0 0.0 411.2235279767594 0.0 411.2235279767594 0.0 15.158715643802765 0.0 0.0 0 0.6435078169319297 0.0 0.0 0.0 VGNT{I|L} 3.1367 - 49 1 1.484 22897.4 1.0 5694 5346 11037 HBL1_DMSO_200M_050219_1,11042 HBL1_DMSO_200M_050219_1,11042,ILFGHNTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11043 57.302 10.0 3421600.0 25 0 205680.0 + 30617 RFIGAVNNM 9 77 511.2662172337422 1020.5178815342844 2 511.2664977908134 MULTI CID FTMS 0 0 0 11037 3571286.75 0.9718396623243988 -2 0.1870613098144531 6 Unmodified _RFIGAVNNM_ ENSG00000165175|ENST00000614558|MID1IP1 13.90604991867851 0.4602628045680013 3 GAVNNM 6 3 32.083 0.0 0.0 3.1438 0.0 0.0 416.2540760724625 0.0 416.2540760724625 0.0 19.60917821584665 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.0 + GAVNNM 3.1438 + + 107 1 1.484 35139.4 1.0 5695 5346 11037 HBL1_DMSO_200M_050219_1,11043 HBL1_DMSO_200M_050219_1,11043,RFIGAVNNM False True RFIGAVNNM 57.301703 511.266497790813 70762608.0 11037.0 ENSG00000165175|ENST00000614558|MID1IP1 6.53758176167806 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11044 57.303 17.0 1132800.0 25 0 103830.0 -1 FPTLAFFMI 9 51 551.7873955743806 1101.5602382155612 2 551.7879516482353 MULTI CID FTMS 0 0 0 11037 3145376.75 0.2387044650829719 35 -2.984699249267578 7 Oxidation (M) _FPTLAFFM(Oxidation (M))I_ ENST00000603942.1_1_19:52613702-52613873:-|nuORF 7.910154910731844 0.6385446671287552 3 YPE 3 -1 26.198 0.0 0.0 2.3783 0.0 0.0 694.3591175763687 0.0 694.3591175763687 0.0 13.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 YPE 2.3783 - 13 1 1.484 22552.2 1.0 5696 5346 11037 HBL1_DMSO_200M_050219_1,11044 HBL1_DMSO_200M_050219_1,11044,FPTLAFFMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11045 57.304 26.0 2670600.0 25 0 289220.0 28071 PPHLPGEKL 9 85 329.8590105895294 986.5552023687884 3 329.8586913943291 MULTI CID FTMS 0 0 0 11037 2055587.625 0.0475364171709713 8 -0.7922782897949219 8 Unmodified _PPHLPGEKL_ ENST00000270460.10_2_19:56206740-56207082:+|nuORF 13.50788311687929 0.4710407108020397 3 C(Carbamidomethyl (C)){[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P 4 7 14.693 0.0 0.0 1.4893 0.0 0.0 0.0 466.3041110435929 466.3041110435929 3.272754322738028 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P 1.4893 - 66 + 1 1.484 61477.4 1.0 5697 5346 11037 HBL1_DMSO_200M_050219_1,11045 HBL1_DMSO_200M_050219_1,11045,PPHLPGEKL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11046 57.305 13.0 1407200.0 25 0 122360.0 + + -1 VTVSDLQHV 9 55 499.23647217414936 996.4583914150988 2 499.2366821169853 MULTI CID FTMS 0 0 0 11037 1829985.125 0.4972434014686869 -4 0.419708251953125 9 Carbamidomethyl (C) _SLFC(Carbamidomethyl (C))GIDSV_ ENSG00000068489|ENST00000262293|PRR11 12.531546534597751 0.4974689918368763 3 V 1 -1 13.099 0.0 0.0 1.3146 0.0 0.0 879.3790971419527 0.0 879.3790971419527 0.0 4.727138826437329 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3146 + + 14 + 1 1.484 18760.6 1.0 5698 5346 11037 HBL1_DMSO_200M_050219_1,11046 HBL1_DMSO_200M_050219_1,11046,SLFCGIDSV False False VTVSDLQHV 57.305238 499.236682116985 5913864.0 11037.0 ENSG00000068489|ENST00000262293|PRR11 0.3540110290050506 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11047 57.306 29.0 897090.0 25 0 76476.0 + 30809 RIIDTVAQV 9 61 507.800788688042 1013.587024442884 2 507.8007385134697 MULTI CID FTMS 0 0 0 11037 1298489.625 0.919418290693214 -1 0.1255455017089843 10 Unmodified _RIIDTVAQV_ ENSG00000102699|ENST00000381989|PARP4 16.149105407346934 0.3995459350917656 3 TVA{[QV]|[N{I|L}]|[RA]|[KV]} 5 4 25.273 0.0 0.0 2.4934 0.0 0.0 497.2983875959 0.0 497.2983875959 0.0 13.283409326844264 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 + TVA{[QV]|[N{I|L}]|[RA]|[KV]} 2.4934 + + 25 1 1.484 27367.8 1.0 5699 5346 11037 HBL1_DMSO_200M_050219_1,11047 HBL1_DMSO_200M_050219_1,11047,RIIDTVAQV False True RIIDTVAQV 57.306417 507.80073851347 25079314.0 11037.0 ENSG00000102699|ENST00000381989|PARP4 4.143847783406575 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11048 57.308 30.0 809670.0 25 0 132780.0 + 44472 YNQVKRVPA 9 46 537.8072050099098 1073.5998570866195 2 537.8068115115166 MULTI CID FTMS 0 0 0 11037 1155120.0 0.6649758079012507 2 -0.1917190551757812 11 Unmodified _YNQVKRVPA_ REV__ENSG00000101544|ENST00000262198|ADNP2 5.296884461304476 0.7297726132274777 3 N 1 -1 6.9897 0.0 0.0 0.65105 0.0 0.0 551.3261276938446 405.2076510065063 956.5337787003508 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.65105 + + 13 + 1 1.484 26005.1 1.0 5700 5346 11037 HBL1_DMSO_200M_050219_1,11048 HBL1_DMSO_200M_050219_1,11048,YNQVKRVPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11049 57.309 32.0 849200.0 25 0 86804.0 + 44904 YPPPEVRNI 9 50 542.7931421868918 1083.5717314405836 2 542.7926513552666 MULTI CID FTMS 0 0 0 11037 1142228.0 0.0240400282967474 35 -2.984699249267578 12 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 12.872603262515298 0.4882369880199512 3 YPP 3 6 50.445 0.0 0.0 4.6555 0.0 0.0 0.0 723.3810518854124 723.3810518854124 35.84121882396211 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YPP 4.6555 + + 12 + 1 1.484 31790.5 1.0 5701 5346 11037 HBL1_DMSO_200M_050219_1,11049 HBL1_DMSO_200M_050219_1,11049,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11050 57.31 40.0 826090.0 25 0 61645.0 + 32006 RVIDREGVYEI 11 37 450.245488522804 1347.714636168612 3 450.2453796267509 MULTI CID FTMS 0 0 0 11037 1027388.875 0.7080123710548053 -1 0.1255455017089843 13 Unmodified _RVIDREGVYEI_ ENSG00000166199|ENST00000302708|ALKBH3;ENST00000533200.5_1_11:43904193-43919192:+|nuORF 11.517880264261096 0.7955614306600027 3 VYE{I|L} 4 7 38.928 0.0 0.0 2.8884 0.0 0.0 825.4457037318855 0.0 825.4457037318855 0.0 27.33410649039925 0.0 0.0 0 1.0 0.0 0.0 0.0 + VYE{I|L} 2.8884 + + 22 1 1.484 35030.6 1.0 5702 5346 11037 HBL1_DMSO_200M_050219_1,11050 HBL1_DMSO_200M_050219_1,11050,RVIDREGVYEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11051 57.312 109.0 568740.0 25 0 139200.0 + 32008 RVIDREGVYEI 11 63 674.8647542990667 0 674.8647949099541 PEAK CID FTMS 0 0 0 11037 857837.75 0.9181512797180432 -1 0.1255455017089843 14 Unmodified _RVIDREGVYEI_ ENSG00000166199|ENST00000302708|ALKBH3;ENST00000533200.5_1_11:43904193-43919192:+|nuORF 4.5288652416199255 0.4761840153648598 3 WV 2 10 6.1979 0.0 0.0 0.45988 0.0 0.0 254.1676667018458 805.3969233818829 1059.5645900837287 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WV 0.45988 - 12 + 1 1.484 51353.4 1.0 5703 5346 11037 HBL1_DMSO_200M_050219_1,11051 HBL1_DMSO_200M_050219_1,11051,RVIDREGVYEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11052 57.314 92.0 708980.0 25 0 169080.0 + 43813 YFDEHYEY 8 80 583.2272742267439 1164.4399955202878 2 583.2274658083916 MULTI CID FTMS 0 0 0 11037 849731.125 0.1506933956609269 -2 0.1870613098144531 15 Unmodified _YFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 36.04419817259434 0.3004715606373109 3 [YE]HD{M(Oxidation (M))|F}YEY 8 4 + 68.115 0.0 0.0 5.8496 5.8496 78.194 0.0 0.0 0.0 1.7609125905568137 13.399480616943508 1.7609125905568137 1.7609125905568137 0 0.75 1.0969100130080565 1.2302046884880935 0.0 [YE]HD{M(Oxidation (M))|F}YEY;{[WN]|[YH]}ED{M(Oxidation (M))|F}YEY;{[YC]|[HE]}DY{M(Oxidation (M))|F}YEY;{[YC]|[HE]}D{M(Oxidation (M))|F}YYEY;{[YC]|[HE]}YD{M(Oxidation (M))|F}YEY;[YE]HD{M(Oxidation (M))|F}EYY;{[WN]|[YH]}EDE{M(Oxidation (M))|F}YY;{[WN]|[YH]}ED{M(Oxidation (M))|F}EYY;[YE]HDE{M(Oxidation (M))|F}YY;{[YC]|[HE]}DY{M(Oxidation (M))|F}EYY 5.8496;5.6984;5.6613;5.4028;5.3382;4.9848;4.9421;4.8336;4.814;4.7965 -;-;-;-;-;-;-;-;-;- 406 1 1.484 53001.4 1.0 5704 5346 11037 HBL1_DMSO_200M_050219_1,11052 HBL1_DMSO_200M_050219_1,11052,YFDEHYEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11053 57.316 100.0 392410.0 25 0 25529.0 + 10739 FYHPETTQL 9 71 568.2743928480368 1134.5342327628734 2 568.2753784060478 MULTI CID FTMS 0 0 0 11037 800214.75 0.8507281142146824 -2 0.1870613098144531 16 Unmodified _FYHPETTQL_ ENSG00000114416|ENST00000357559|FXR1;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1 30.22481116460888 0.1466181017706357 3 [AG]T{[MS]|[{M(Oxidation (M))|F}A]}[EP]TTQ{I|L} 11 5 [AG]T{[MS]|[{M(Oxidation (M))|F}A]}[EP]TT + + 20.573 17.119 1.9556 1.8134 1.8134 48.706 0.0 0.0 0.0 0.0 -0.4188179310200048 -0.4188179310200048 0.0 0 0.0 0.0 0.0 0.5 [AG]T{[MS]|[{M(Oxidation (M))|F}A]}[EP]TTQ{I|L} 1.8134 - 126 + 1 1.484 35441.6 1.0 5705 5346 11037 HBL1_DMSO_200M_050219_1,11053 HBL1_DMSO_200M_050219_1,11053,FYHPETTQL False True FYHPETTQL 57.316459 568.275378406048 20322962.0 11037.0 nc|ENSG00000114416|P51114-2|FXR1;;nc|ENSG00000114416|P51114-3|FXR1;;ENSG00000114416|ENST00000357559|FXR1 8.732217788696289 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11054 57.318 68.0 436440.0 25 0 46557.0 + 27673 PLHVPHHI 8 71 475.2722634618589 948.529973990518 2 475.2731201052666 MULTI CID FTMS 0 0 0 11037 497787.65625 0.9393956925054068 6 -0.6309127807617188 17 Unmodified _PLHVPHHI_ REV__ENSG00000116127|ENST00000613296|ALMS1;REV__nc|ENSG00000116127|Q8TCU4-2|ALMS1;REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1 6.354104778181461 0.7857632046190106 3 {I|L} 1 -1 13.495 0.0 0.0 1.4227 0.0 0.0 817.4351233819226 0.0 817.4351233819226 0.0 4.44537812595911 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4227 + + 20 + 1 1.484 31479.7 1.0 5706 5346 11037 HBL1_DMSO_200M_050219_1,11054 HBL1_DMSO_200M_050219_1,11054,PLHVPHHI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11055 57.325 374.0 312810.0 25 0 40273.0 + 12610 GVISDTELQQA 11 131 580.7932170414017 1159.571881149603 2 580.7927123904228 MULTI CID FTMS 0 0 0 11037 513562.125 0.1614509668124003 -2 0.1870613098144531 18 Unmodified _GVISDTELQQA_ ENSG00000249915|ENST00000264933|PDCD6;ENST00000507290.5_1_5:1632852-1634017:-|nuORF;ENST00000507505.5_1_5:1599907-1634017:-|nuORF;ENST00000507841.5_1_5:1632852-1634017:-|nuORF;ENST00000515587.1_1_5:271739-272994:+|nuORF;nc|ENSG00000249915|O75340-2|PDCD6;nc|ENSG00000249915|O75340-3|PDCD6 81.89019881105858 0.0062508977670184 3 [AG]AQMSR 7 10 39.567 0.0 0.0 3.4122 0.0 0.0 0.0 455.2232843080596 455.2232843080596 9.112453551833156 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.9247425010840048 0.2887254899964357 [AG]AQMSR 3.4122 - 3358 1 1.484 89563.1 1.0 5707 5346 11037 HBL1_DMSO_200M_050219_1,11055 HBL1_DMSO_200M_050219_1,11055,GVISDTELQQA True True GVISDTELQQA 57.324803 580.792712390423 45845700.0 11037.0 ENST00000507841.5_1_5:1632852-1634017:-|nuORF;;ENST00000507290.5_1_5:1632852-1634017:-|nuORF;;ENSG00000249915|ENST00000264933|PDCD6;;nc|ENSG00000249915|O75340-2|PDCD6;;ENST00000515587.1_1_5:271739-272994:+|nuORF;;ENST00000507505.5_1_5:1599907-1634017:-|nuORF;;nc|ENSG00000249915|O75340-3|PDCD6 6.556238492329915 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11056 57.327 104.0 280430.0 25 0 18871.0 12420 GTLQPALV 8 75 399.7384437305786 0 399.7384521365166 PEAK CID FTMS 0 0 0 11037 441444.15625 1.0 0 0.0 19 Unmodified _GTLQPALV_ ENSG00000004779|ENST00000007516|NDUFAB1 2.059750862983233 0.5930426321653702 3 S 1 8 1.2591 0.0 0.0 0.15788 0.0 0.0 591.3562229330338 116.05106531314686 707.4072882461807 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.15788 - 2 + 1 1.484 28681.6 1.0 5708 5346 11037 HBL1_DMSO_200M_050219_1,11056 HBL1_DMSO_200M_050219_1,11056,GTLQPALV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11057 57.335 441.0 342640.0 25 0 24070.0 -1 0 139 881.9127604281156 1761.810967923031 2 881.9165527224541 MULTI CID FTMS 0 0 0 11037 441193.40625 0.3285888130296497 6 -0.6309127807617188 20 3 G[HA]GQAEN{I|L}DP{[QN]|[E{I|L}]|[KN]} 13 -1 49.365 0.0 0.0 2.802 0.0 0.0 412.2311878888688 0.0 412.2311878888688 0.0 27.05778250464173 0.0 0.0 0 0.7817183090963749 0.0 0.3807196863200844 1.329689690656103 G[HA]GQAEN{I|L}DP{[QN]|[E{I|L}]|[KN]} 2.802 - 4036 1 1.484 104374.6 1.0 5709 5346 11037 HBL1_DMSO_200M_050219_1,11057 HBL1_DMSO_200M_050219_1,11057, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11059 57.346 527.0 276710.0 25 0 34224.0 5719 DPLKCPSI 8 167 436.72921941668847 871.443885900177 2 436.7292663455009 MULTI CID FTMS 0 0 0 11058 207484.28125 0.5670036922081044 1 -0.1483116149902343 1 Unmodified _DPLKCPSI_ ENSG00000165899|ENST00000547103|OTOGL 19.438996006549623 0.6237395211498085 3 [EP]WVK[DV] 7 7 + 33.288 0.0 0.0 3.8199 3.8199 79.846 0.0 0.0 0.0 6.777807052660805 17.614189627179915 6.777807052660805 9.030899869919438 0 0.3494850021680094 0.0 0.0 0.3807196863200844 [EP]WVK[DV];[WE]PVK[DV];[PS]MPVK[DV];[PA]{M(Oxidation (M))|F}PVK[DV];{[QV]|[N{I|L}]|[RA]|[KV]}[EP]W[DV];[{I|L}P][WD]K[DV];{[CA]|SS}[HT]VK[DV];{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}P]W[DV];{[TV]|[{I|L}S]}V[PG]W[DV];[VG]S[{I|L}P]W[DV] 3.8199;2.7836;2.2616;2.113;1.8071;1.7207;1.5108;1.1236;0.79358;0.74677 -;-;-;-;-;-;-;-;-;- 393 1 1.484 116932.7 1.0 5710 5347 11058 HBL1_DMSO_200M_050219_1,11059 HBL1_DMSO_200M_050219_1,11059,DPLKCPSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11060 57.347 13.0 5326700.0 25 0 728290.0 + 1299 AIVDKVPSV 9 71 464.2798654458579 926.545177958516 2 464.2796813845634 MULTI CID FTMS 0 0 0 11058 2925640.5 0.4637735067820547 -3 0.23046875 2 Unmodified _AIVDKVPSV_ ENSG00000181789|ENST00000314797|COPG1 29.081581746732265 0.1611639662936252 3 [{I|L}A]{I|L}E[KA]PSV 9 3 + 44.319 0.0 0.0 4.7833 4.7833 81.839 0.0 0.0 0.0 18.018599018277648 8.645162531850872 8.645162531850872 7.781512503836431 0 0.4247425010840047 2.0 0.1989700043360188 0.0 [{I|L}A]{I|L}E[KA]PSV;[{I|L}A]{I|L}[QT]VPSV;[{I|L}A]{I|L}[QT][{I|L}T][PA] 4.7833;3.9434;1.0854 -;-;- 346 + 1 1.484 59329.9 1.0 5711 5347 11058 HBL1_DMSO_200M_050219_1,11060 HBL1_DMSO_200M_050219_1,11060,AIVDKVPSV False True AIVDKVPSV 57.347413 464.279681384563 69350600.0 11058.0 ENSG00000181789|ENST00000314797|COPG1 3.9807048638661695 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11061 57.355 438.0 590660.0 25 0 27682.0 + 30171 QVTNEFQTV 9 220 533.2642881875158 1064.5140234418316 2 533.2634155154228 MULTI CID FTMS 0 0 0 11058 416511.9375 0.241823153525941 -1 0.0434074401855468 3 Unmodified _QVTNEFQTV_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 96.28474662873226 0.0124266067997264 3 {[TV]|[{I|L}S]}QNE{M(Oxidation (M))|F} 6 5 46.107 0.0 0.0 4.3312 0.0 0.0 0.0 343.1621993237026 343.1621993237026 18.068153551177662 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.6883753548010496 1.385151878060192 {[TV]|[{I|L}S]}QNE{M(Oxidation (M))|F} 4.3312 - 8660 1 1.484 200822.6 1.0 5712 5347 11058 HBL1_DMSO_200M_050219_1,11061 HBL1_DMSO_200M_050219_1,11061,QVTNEFQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11062 57.357 67.0 604050.0 25 0 57045.0 -1 AVIPMMYPA 9 88 504.7502765219611 1007.4860001107222 2 504.7509948611259 MULTI CID FTMS 0 0 0 11058 304587.5 0.2924242591526741 -2 0.1689529418945312 4 Oxidation (M) _AVIPM(Oxidation (M))MYPA_ ENSG00000198691|ENST00000370225|ABCA4 9.347437153973935 0.588369872918737 3 {[VA]|[{I|L}G]}{I|L} 3 -1 25.942 0.0 0.0 2.5749 0.0 0.0 0.0 721.2730233863659 721.2730233863659 4.391339612252022 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L} 2.5749 + + 209 1 1.484 35496.3 1.0 5713 5347 11058 HBL1_DMSO_200M_050219_1,11062 HBL1_DMSO_200M_050219_1,11062,AVIPMMYPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11063 57.366 509.0 331360.0 25 0 30501.0 + -1 MNQSYCTFM 9 170 591.2245078789098 1180.4344628246197 2 591.2249633669853 MULTI CID FTMS 0 0 0 11058 301798.03125 0.0375386256693607 7 -0.748870849609375 5 Carbamidomethyl (C) _MNQSYC(Carbamidomethyl (C))TFM_ REV__ENST00000490863.5_1_1:54650890-54651175:-|nuORF 7.910154910731844 0.6385446671287552 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QNM 5 -1 25.283 0.0 0.0 2.1418 0.0 0.0 0.0 570.1670427408882 570.1670427408882 9.085142482848294 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.2887254899964357 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QNM 2.1418 - 1470 1 1.484 124411.0 1.0 5714 5347 11058 HBL1_DMSO_200M_050219_1,11063 HBL1_DMSO_200M_050219_1,11063,MNQSYCTFM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11064 57.377 652.0 172230.0 25 0 22404.0 -1 TMFSCEAHNL 10 158 403.8391865292307 1208.495730187892 3 403.8393737673759 MULTI CID FTMS 0 0 0 11058 277178.5 1.0 0 0.0 6 Carbamidomethyl (C) _TMFSC(Carbamidomethyl (C))EAHNL_ ENSG00000092445|ENST00000263798|TYRO3 3.072263186857199 0.7124254767349502 3 {I|L} 1 -1 14.604 0.0 0.0 1.2085 0.0 0.0 1077.400726991406 0.0 1077.400726991406 0.0 -0.3613009091430541 -0.3613009091430541 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2085 + + 380 + 1 1.484 88452.5 1.0 5715 5347 11058 HBL1_DMSO_200M_050219_1,11064 HBL1_DMSO_200M_050219_1,11064,TMFSCEAHNL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11065 57.388 595.0 187200.0 25 0 5438.8 + -1 LPYLSQEHQQQV 12 159 735.3722936435437 1468.7300343538873 2 735.3727905154228 MULTI CID FTMS 0 0 0 11058 238033.5 1.0 0 0.0 7 2 Oxidation (M) _LM(Oxidation (M))LWEHPRPKM(Oxidation (M))_ ENST00000590067.5_1_19:3053819-3055997:-|nuORF;ENSG00000104964|ENST00000327141|TLE5;nc|ENSG00000104964|Q08117-2|TLE5 27.628801355627647 0.4434699450731472 3 {I|L}PY{I|L}SQEHQQQV 12 -1 + 106.72 0.0 0.0 7.2663 7.2663 87.222 0.0 0.0 0.0 20.55475313541848 4.972252553915197 4.972252553915197 4.972252553915197 0 1.8539171939081167 1.6989700043360187 0.6549471895720984 2.479339555460717 {I|L}PY{I|L}SQEHQQQV;{I|L}PY{I|L}SQEHQQN{I|L};{I|L}PY{I|L}S[AG]EHQQQV;{I|L}PY{I|L}SQEHQ[AG]QV;{I|L}PY{I|L}SQEHQQ[AG]V;{I|L}PY{I|L}PYT[{M(Oxidation (M))|F}T]QQV;{I|L}PY{I|L}S[AG]EHQQN{I|L};{I|L}PY{I|L}SQEHQ[AG]N{I|L};{I|L}PY{I|L}SQEPW[HT]V;{I|L}PYQH{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}QQV 7.2663;6.9277;6.6468;6.6468;6.4388;6.4157;6.3083;6.3083;6.2974;6.2632 -;-;-;-;-;-;-;-;-;- 32750 + 1 1.484 80197.9 1.0 5716 5347 11058 HBL1_DMSO_200M_050219_1,11065 HBL1_DMSO_200M_050219_1,11065,LMLWEHPRPKM False False LPYLSQEHQQQV 57.387592 735.372790515423 2843614.0 11058.0 ENST00000590067.5_1_19:3053819-3055997:-|nuORF;;ENSG00000104964|ENST00000327141|TLE5;;nc|ENSG00000104964|Q08117-2|TLE5 8.580222765604654 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11066 57.398 620.0 186280.0 25 0 11599.0 + 23576 LTNALRCTTE 10 177 561.2869195927296 1120.5592862522592 2 561.2888061404228 MULTI CID FTMS 0 0 0 11058 169666.1875 0.0664051694809198 7 -0.748870849609375 8 Unmodified _LTNALRCTTE_ REV__ENSG00000154930|ENST00000323482|ACSS1;REV__nc|ENSG00000154930|Q9NUB1-2|ACSS1;REV__nc|ENSG00000154930|Q9NUB1-3|ACSS1;REV__nc|ENSG00000154930|Q9NUB1-4|ACSS1 16.149105407346934 0.5765757077271437 3 [{I|L}T]NT{I|L}HD{I|L} 8 -1 42.255 0.0 0.0 3.7709 0.0 0.0 0.0 210.07653954726 210.07653954726 10.496069255586477 0.0 0.0 0.0 0 0.0 2.0 0.805462187404089 0.0 [{I|L}T]NT{I|L}HD{I|L} 3.7709 - 2116 1 1.484 95079.0 1.0 5717 5347 11058 HBL1_DMSO_200M_050219_1,11066 HBL1_DMSO_200M_050219_1,11066,LTNALRCTTE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11067 57.412 800.0 256300.0 25 0 17261.0 + 3756 DAHFHFHQI 9 232 384.5177865347901 1150.5315302045703 3 384.5176879763603 MULTI CID FTMS 0 0 0 11058 133122.09375 0.9343918659631668 1 -0.1483116149902343 9 Unmodified _DAHFHFHQI_ ENSG00000167716|ENST00000409644|WDR81;ENST00000464528.5_1_17:1630890-1639119:+|nuORF;nc|ENSG00000167716|Q562E7-2|WDR81;nc|ENSG00000167716|Q562E7-3|WDR81;nc|ENSG00000167716|Q562E7-4|WDR81;nc|ENSG00000167716|Q562E7-5|WDR81;nc|ENSG00000167716|Q562E7-6|WDR81 37.97399986684836 0.0865783450051559 3 {[DA]|[EG]}H{M(Oxidation (M))|F}H{M(Oxidation (M))|F}HQ{I|L} 9 0 + 37.056 0.0 0.0 3.2208 3.2208 68.013 0.0 0.0 0.0 0.4669546272644922 4.164069238177987 0.4669546272644922 0.4669546272644922 0 0.5044321917401079 1.3979400086720375 0.0297966019298021 0.0 + + {[DA]|[EG]}H{M(Oxidation (M))|F}H{M(Oxidation (M))|F}HQ{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[DA]|[EG]}H{M(Oxidation (M))|F}HQ{I|L};[HA]D{M(Oxidation (M))|F}H{M(Oxidation (M))|F}HQ{I|L};[{I|L}T]{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}[YK]D;{[{M(Oxidation (M))|F}H]|[RQ]}{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}H]|[RQ]}H{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}H]|[RQ]}H{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}M{[CA]|SS};{[QN]|[E{I|L}]|[KN]}[PG]{M(Oxidation (M))|F}HS[HM]P;[VP][C(Carbamidomethyl (C))N]H{M(Oxidation (M))|F}HQ{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}H]|[RQ]}{[QN]|[E{I|L}]|[KN]}H{[QG]|[NA]} 3.2208;3.1802;2.8792;2.7001;2.2279;2.1169;1.6802;1.5667;1.4573;1.3587 +;-;-;-;-;-;-;-;-;- + 1034 1 1.484 160998.8 0.8799999952316284 5718 5347 11058 HBL1_DMSO_200M_050219_1,11067 HBL1_DMSO_200M_050219_1,11067,DAHFHFHQI True True DAHFHFHQI 57.412244 384.51768797636 1090950.75 11058.0 nc|ENSG00000167716|Q562E7-3|WDR81;;nc|ENSG00000167716|Q562E7-2|WDR81;;nc|ENSG00000167716|Q562E7-4|WDR81;;nc|ENSG00000167716|Q562E7-6|WDR81;;ENST00000464528.5_1_17:1630890-1639119:+|nuORF;;ENSG00000167716|ENST00000409644|WDR81;;nc|ENSG00000167716|Q562E7-5|WDR81 4.0237077077229815 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11068 57.428 800.0 46452.0 25 0 5436.9 -1 0 75 769.6948259805948 0 769.6949951052666 PEAK CID FTMS 0 0 0 11058 131038.3515625 1.0 0 0.0 10 3 Q{I|L}{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}GG 7 -1 12.695 0.0 0.0 0.82578 0.0 0.0 392.85576416646455 411.1433809869751 803.9991451534396 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L}{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}GG 0.82578 - 186 + 1 1.484 35948.5 0.9700000286102296 5719 5347 11058 HBL1_DMSO_200M_050219_1,11068 HBL1_DMSO_200M_050219_1,11068, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11069 57.441 749.0 212090.0 25 0 13176.0 + 18103 KTLDLSNNQL 10 194 573.3113632062286 1144.6081734792572 2 573.3114501833916 MULTI CID FTMS 0 0 0 11058 134648.765625 0.6499345353290504 1 -0.1483116149902343 11 Unmodified _KTLDLSNNQL_ ENSG00000130764|ENST00000378251|LRRC47 37.07464296494664 0.1884581770199685 3 [{I|L}T]KD{I|L}SNNQ{I|L} 10 2 + 65.138 0.0 0.0 5.6909 5.6909 80.089 0.0 0.0 0.0 3.0898892261249387 8.819459175083601 3.0898892261249387 3.0898892261249387 0 0.1549471895720985 0.6777807052660807 1.4802046884880935 0.7742275032520141 [{I|L}T]KD{I|L}SNNQ{I|L};{[TV]|[{I|L}S]}GTV{I|L}SNNQ{I|L};[KT]{I|L}D{I|L}SNNQ{I|L};[{I|L}T]KD{I|L}SNGGQ{I|L};[{I|L}T]KD{I|L}SGGNQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NNS{I|L}DKPV;{[TV]|[{I|L}S]}GTV{I|L}SNGGQ{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV{I|L}SNNQ{I|L};[KT]EV{I|L}SNNQ{I|L};[KT]{I|L}D{I|L}SGGNQ{I|L} 5.6909;5.4209;5.2253;4.8902;4.8902;4.79;4.6234;4.5362;4.4363;4.4247 -;-;+;-;-;-;-;-;-;- + 2041 1 1.484 117811.2 1.0 5720 5347 11058 HBL1_DMSO_200M_050219_1,11069 HBL1_DMSO_200M_050219_1,11069,KTLDLSNNQL False True KTLDLSNNQL 57.440567 573.311450183392 2748360.75 11058.0 ENSG00000130764|ENST00000378251|LRRC47 6.144731680552165 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11070 57.456 800.0 61058.0 25 0 16473.0 -1 0 38 1151.1478033762194 3450.4215807288583 3 1151.483813464642 MULTI CID FTMS 0 0 0 11058 125577.5 0.7663220155103508 5 -0.5875053405761719 12 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20258 0.0 0.0 2000.7048581720207 1299.6389387319664 3300.343796903987 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20258 - 2 + 1 1.484 47244.4 0.7799999713897705 5721 5347 11058 HBL1_DMSO_200M_050219_1,11070 HBL1_DMSO_200M_050219_1,11070, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11071 57.469 800.0 171440.0 25 0 37139.0 -1 0 53 1099.788139889955 3296.342590270064 3 1099.791552722454 MULTI CID FTMS 0 0 0 11058 107041.6875 0.5495252003726461 -4 0.38079833984375 13 3 TS 2 -1 11.498 0.0 0.0 0.34881 0.0 0.0 2481.9216572301248 623.3173311822874 3105.2389884124123 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.0 TS 0.34881 - 96 + 1 1.484 118936.9 0.8799999952316284 5722 5347 11058 HBL1_DMSO_200M_050219_1,11071 HBL1_DMSO_200M_050219_1,11071, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11072 57.483 800.0 402310.0 25 0 33317.0 + 21567 LPKIYIHRV 9 281 380.24195937428607 0 380.2419616580009 PEAK CID FTMS 0 0 0 11058 106155.125 0.6390639654875464 1 -0.1483116149902343 14 Unmodified _LPKIYIHRV_ ENSG00000105671|ENST00000247003|DDX49;ENST00000601772.1_1_19:19035054-19035967:+|nuORF;ENST00000601803.5_1_19:19035694-19035868:+|nuORF 16.565877749689598 0.2369545154010214 3 Y 1 8 6.9897 0.0 0.0 0.92155 0.0 0.0 72.08211254534531 520.3008921289214 592.3830046742668 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.92155 + + 104 + 1 1.484 249916.7 0.7300000190734863 5723 5347 11058 HBL1_DMSO_200M_050219_1,11072 HBL1_DMSO_200M_050219_1,11072,LPKIYIHRV False True LPKIYIHRV 57.483287 380.2417 2616679.5 11058.0 ENST00000601803.5_1_19:19035694-19035868:+|nuORF;;ENSG00000105671|ENST00000247003|DDX49;;ENST00000601772.1_1_19:19035054-19035967:+|nuORF 6.509244600931804 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11074 57.488 2.5 31924000.0 25 0 3098300.0 + 19698 LGLTNQPEL 9 90 492.77147364149215 983.5283943497844 2 492.7720214724541 MULTI CID FTMS 0 0 0 11073 17683866.0 0.6718530641199782 -2 0.1917190551757812 1 Unmodified _LGLTNQPEL_ ENSG00000179626|ENST00000641569|OR6C4 78.14939416004806 0.0179651292570206 3 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L} 6 6 42.345 0.0 0.0 4.3054 0.0 0.0 0.0 354.16527441014324 354.16527441014324 12.836994631385416 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 1.2273473230428984 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L} 4.3054 - 884 1 1.481 66601.6 1.0 5724 5348 11073 HBL1_DMSO_200M_050219_1,11074 HBL1_DMSO_200M_050219_1,11074,LGLTNQPEL True True AVITNQPEI 57.487529 492.772021472454 895599424.0 11073.0 ENST00000557100.5_1_14:35871861-35873850:-|nuORF;;ENSG00000100906|ENST00000216797|NFKBIA;;ENST00000557459.1_1_14:35872311-35873850:-|nuORF;;NFKBIA|p.C215Vfs*23|1|0.14|ENSG00000100906|chr14:35402658-35402658|G/-|frameshift_variant 4.097653706868489 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11075 57.489 5.2 15634000.0 25 0 3086100.0 + 44629 YPFKPPKV 8 77 325.86048683472575 974.5596311043772 3 325.8603088259697 MULTI CID FTMS 0 0 0 11073 9981048.0 0.129401402698755 -19 1.7235870361328125 2 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 50.436 0.0 0.0 5.1752 5.1752 80.095 0.0 0.0 0.0 22.319298462939727 4.507819773298181 4.507819773298181 4.626653383086925 0 0.2614393726401688 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;YP{M(Oxidation (M))|F}KPV[KP];YP{M(Oxidation (M))|F}KVP[KP];[KP]PKVY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[HG]|PP}KKVY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T][KP]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.1752;4.7005;4.5198;2.0886;1.8463;1.3714;1.0433 +;-;-;-;-;-;- + 255 + 1 1.481 70048.3 1.0 5725 5348 11073 HBL1_DMSO_200M_050219_1,11075 HBL1_DMSO_200M_050219_1,11075,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11076 57.49 3.6 13927000.0 25 0 1303500.0 + 4007 DALRSGLTV 9 82 466.26395573800335 930.5133585428068 2 466.2641174197197 MULTI CID FTMS 0 0 0 11073 15825231.0 0.065251765965334 -2 0.1917190551757812 3 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 47.594388314883695 0.0456443387682827 3 {[DA]|[EG]}{I|L}R[SG]{I|L}TV 9 0 + 60.04 0.0 0.0 6.4523 6.4523 83.208 0.0 0.0 0.0 13.627815773883327 16.478174818886373 13.627815773883327 3.640078085766092 0 1.742992819099939 1.6989700043360187 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}R[SG]{I|L}TV;{[DA]|[EG]}VVA[SG]{I|L}TV;{[DA]|[EG]}VV{[QS]|[NT]}{I|L}TV;{[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[TV]|[{I|L}S]}[PS]A[SG]{I|L}TV;{[DA]|[EG]}{I|L}R[KT]EV;{[TV]|[{I|L}S]}G[TP][SG]{I|L}TV;{[DA]|[EG]}VVA[KT]EV;{[TV]|[{I|L}S]}AA[RV]DTV;{[TV]|[{I|L}S]}[PS]{[QS]|[NT]}{I|L}TV 6.4523;6.0611;5.3591;4.9878;4.9386;4.8953;4.7192;4.4983;4.475;4.2366 +;-;-;-;-;-;-;-;-;- + 477 1 1.481 44712.3 1.0 5726 5348 11073 HBL1_DMSO_200M_050219_1,11076 HBL1_DMSO_200M_050219_1,11076,DALRSGLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11077 57.491 13.0 2887800.0 25 0 335650.0 + 17887 KQMSISTGL 9 69 482.7602716926552 963.5059904521104 2 482.7606384158134 MULTI CID FTMS 0 0 0 11073 4116367.0 1.0 0 0.0 4 Unmodified _KQMSISTGL_ ENSG00000109805|ENST00000251496|NCAPG 34.40172386719151 0.1061884637610825 3 GNMS{I|L}[MN]{I|L} 8 5 34.875 0.0 0.0 3.6196 0.0 0.0 85.08991439033359 0.0 85.08991439033359 0.0 24.417534814646373 0.0 0.0 0 0.4247425010840047 0.0 0.805462187404089 0.0 GNMS{I|L}[MN]{I|L} 3.6196 - 179 1 1.481 37973.0 1.0 5727 5348 11073 HBL1_DMSO_200M_050219_1,11077 HBL1_DMSO_200M_050219_1,11077,KQMSISTGL True True KQMSISTGL 57.491064 482.760638415813 26573534.0 11073.0 ENSG00000109805|ENST00000251496|NCAPG 5.571837584177653 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11078 57.492 14.0 5346000.0 25 0 637120.0 + 41187 VPDTSRIYV 9 73 525.2851565995707 1048.5557602659412 2 525.2852661013603 MULTI CID FTMS 0 0 0 11073 3120273.5 0.2793094839457671 5 -0.5299415588378906 5 Unmodified _VPDTSRIYV_ ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT 36.506200033944 0.094635877243972 3 VPD[KS]{[QN]|[E{I|L}]|[KN]}YV 9 2 + 62.317 0.0 0.0 5.9432 5.9432 91.454 0.0 0.0 0.0 36.12704280191288 6.90999983289359 6.90999983289359 37.61993046835002 0 1.075257498915995 1.3979400086720375 0.7742275032520141 0.0 VPD[KS]{[QN]|[E{I|L}]|[KN]}YV;{[QN]|[E{I|L}]|[KN]}[WQ]{I|L}VYV;{[QN]|[E{I|L}]|[KN]}[WQ]{I|L}YVV 5.9432;2.3554;2.3298 -;-;- 129 + 1 1.481 70313.8 1.0 5728 5348 11073 HBL1_DMSO_200M_050219_1,11078 HBL1_DMSO_200M_050219_1,11078,VPDTSRIYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11079 57.494 56.0 1356900.0 25 0 138800.0 + 34604 SPIVSPRI 8 77 434.76624372923766 867.5179345252753 2 434.7662841677666 MULTI CID FTMS 0 0 0 11073 1092860.25 1.0 0 0.0 6 Unmodified _SPIVSPRI_ ENSG00000112029|ENST00000229758|FBXO5;nc|ENSG00000112029|Q9UKT4-2|FBXO5 47.74868867922204 0.1498366402366518 3 SP{I|L}VS[RP]{I|L} 8 0 + 77.211 0.0 0.0 8.9003 8.9003 98.967 0.0 0.0 0.0 55.15994091163677 3.455612550363796 3.455612550363796 77.21130963036558 0 1.2302046884880935 2.0 0.3494850021680094 0.4247425010840047 + + SP{I|L}VS[RP]{I|L} 8.9003 + + 192 + 1 1.481 64924.5 1.0 5729 5348 11073 HBL1_DMSO_200M_050219_1,11079 HBL1_DMSO_200M_050219_1,11079,SPIVSPRI False True SPIVSPRI 57.493654 434.766284167767 27199686.0 11073.0 ENSG00000112029|ENST00000229758|FBXO5;;nc|ENSG00000112029|Q9UKT4-2|FBXO5 3.1565175453821817 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11080 57.496 86.0 1150000.0 25 0 236500.0 + 15385 IPNRIPKI 8 104 317.5431911443037 949.6077440331112 3 317.5429870486259 MULTI CID FTMS 0 0 0 11073 669720.0 0.5872924091960651 2 -0.1685409545898437 7 Unmodified _IPNRIPKI_ ENSG00000164323|ENST00000458385|CFAP97;nc|ENSG00000164323|Q9P2B7-2|CFAP97 36.12702656103203 0.299085846329477 3 {I|L}PNR{I|L}PK{I|L} 8 0 + 28.203 0.0 0.0 2.9699 2.9699 79.387 0.0 0.0 0.0 6.3482000930547215 4.914347191569426 4.914347191569426 9.262137858390808 0 0.3935078169319297 0.0 0.0 0.4247425010840047 + + {I|L}PNR{I|L}PK{I|L};{I|L}PGGR{I|L}PK{I|L};{I|L}PNR{I|L}{I|L}[KP];{I|L}PGGR{I|L}{I|L}[KP] 2.9699;1.9946;1.4978;0.52246 +;-;-;- + 115 + 1 1.481 83587.0 1.0 5730 5348 11073 HBL1_DMSO_200M_050219_1,11080 HBL1_DMSO_200M_050219_1,11080,IPNRIPKI False True IPNRIPKI 57.495572 317.542987048626 49104753.0 11073.0 nc|ENSG00000164323|Q9P2B7-2|CFAP97;;ENSG00000164323|ENST00000458385|CFAP97 1.9979095856348676 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11081 57.499 154.0 664480.0 25 0 84816.0 + 27934 PLTRPGPSL 9 99 469.276764901342 936.538976869484 2 469.2764770388603 MULTI CID FTMS 0 0 0 11073 655804.125 0.036664934532426 27 -2.213321685791016 8 Unmodified _PLTRPGPSL_ REV__ENST00000291892.10_1_19:55558575-55559456:-|nuORF 21.74664581756881 0.2544899275067181 3 {I|L}PPE 4 -1 51.961 0.0 0.0 5.5482 0.0 0.0 0.0 497.2858608241711 497.2858608241711 39.48677163975694 0.0 0.0 0.0 0 0.5418727718234408 2.0 0.0 0.0 {I|L}PPE 5.5482 - 82 + 1 1.481 82357.1 1.0 5731 5348 11073 HBL1_DMSO_200M_050219_1,11081 HBL1_DMSO_200M_050219_1,11081,PLTRPGPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11082 57.5 74.0 633070.0 25 0 71977.0 + 22310 LPSEMQTRI 9 68 537.7849152929482 1073.5552776526963 2 537.7857543826103 MULTI CID FTMS 0 0 0 11073 604729.1875 0.767071840304036 -2 0.1917190551757812 9 Unmodified _LPSEMQTRI_ ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF 26.020703789607367 0.2001090068861241 3 {I|L}PSEMQ 6 3 76.146 0.0 0.0 7.0929 0.0 0.0 0.0 385.2215365045532 385.2215365045532 50.91251590079672 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.4247425010840047 0.0 + {I|L}PSEMQ 7.0929 + + 143 + 1 1.481 44581.2 1.0 5732 5348 11073 HBL1_DMSO_200M_050219_1,11082 HBL1_DMSO_200M_050219_1,11082,LPSEMQTRI False True LPSEMQTRI 57.500353 537.78575438261 6799227.0 11073.0 ENSG00000067596|ENST00000262415|DHX8;;ENST00000587044.1_1_17:41568567-41594747:+|nuORF 5.585907459259033 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11083 57.503 146.0 356860.0 25 0 27191.0 -1 0 80 591.817351091449 2363.240298499396 4 592.0687133669853 MULTI CID FTMS 0 0 0 11073 540713.0625 0.2181693793943252 -2 0.1917190551757812 10 3 R[MT] 3 -1 15.458 0.0 0.0 0.65408 0.0 0.0 1957.043168227715 0.0 1957.043168227715 0.0 1.6452935963211246 0.0 0.0 0 0.5 0.0 0.0 0.0 R[MT] 0.65408 - 75 + 1 1.481 50501.7 1.0 5733 5348 11073 HBL1_DMSO_200M_050219_1,11083 HBL1_DMSO_200M_050219_1,11083, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11084 57.507 192.0 405750.0 25 0 45815.0 + -1 VYITGHPQGPSAL 13 95 670.3537972154107 1338.6930414976214 2 670.3547241091728 MULTI CID FTMS 0 0 0 11073 420475.4375 0.4681436692151879 -2 0.1917190551757812 11 Oxidation (M) _VYLGRDKTM(Oxidation (M))QL_ ENST00000477648.1_1_9:103064475-103066198:-|nuORF;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 20.41453444215458 0.6105011870913812 3 VY{I|L}TGH[QP]G[PS]A{I|L} 13 -1 + 106.08 0.0 0.0 7.9243 7.9243 95.038 0.0 0.0 0.0 77.40482286209759 14.256472707169763 14.256472707169763 13.851518780601936 0 2.504432191740108 2.0 0.9604093769761876 0.0 VY{I|L}TGH[QP]G[PS]A{I|L};VY{I|L}TG{M(Oxidation (M))|F}{[QS]|[NT]}G[PS]A{I|L};VY{I|L}TGY[QA]G[PS]A{I|L};VY{I|L}TGH[QP]G[TA][VP];VY{I|L}TGYQQ[PS]A{I|L};VY{I|L}T[TA]{I|L}EWM{I|L};VY{I|L}TGH[QP][QT][VP];VY{I|L}TG{M(Oxidation (M))|F}[{I|L}P][MD]A{I|L};VY{I|L}TGH[{I|L}A][TA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};VY{I|L}TG{M(Oxidation (M))|F}{[QS]|[NT]}G[TA][VP] 7.9243;6.8896;6.8304;6.3812;6.0732;5.8571;5.8255;5.5507;5.5083;5.3465 -;-;-;-;-;-;-;-;-;- 3330 + 1 1.481 61710.8 1.0 5734 5348 11073 HBL1_DMSO_200M_050219_1,11084 HBL1_DMSO_200M_050219_1,11084,VYLGRDKTMQL False False VYITGHPQGPSAL 57.506991 670.354724109173 6016640.0 11073.0 ENST00000477648.1_1_9:103064475-103066198:-|nuORF;;ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 9.6396058400472 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11085 57.509 95.0 636570.0 25 0 77979.0 + 23474 LTHIEPSL 8 97 455.2557361064309 908.4969192796618 2 455.2556945681572 MULTI CID FTMS 0 0 0 11073 373569.65625 0.0170270062345965 15 -1.0700302124023438 12 Unmodified _LTHIEPSL_ REV__ENSG00000107758|ENST00000360663|PPP3CB;REV__ENST00000495897.2_1_10:75227245-75231333:-|nuORF;REV__nc|ENSG00000107758|P16298-2|PPP3CB;REV__nc|ENSG00000107758|P16298-3|PPP3CB;REV__nc|ENSG00000107758|P16298-4|PPP3CB 49.66892048692302 0.1408045912742846 3 [VP]PQTAPS{I|L} 9 -1 [VP]PQTA + + 22.553 17.53 2.9546 2.4825 2.4825 49.353 0.0 0.0 0.0 0.0 5.023241011725389 0.0 0.0 0 0.3807196863200844 0.0 0.6861818737241735 0.0 [VP]PQTAPS{I|L} 2.4825 - 362 + 1 1.481 51874.7 1.0 5735 5348 11073 HBL1_DMSO_200M_050219_1,11085 HBL1_DMSO_200M_050219_1,11085,LTHIEPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11086 57.519 554.0 248230.0 25 0 18297.0 43521 WWWWIWWQWW 10 101 874.9044782998504 1747.7944036665008 2 875.4044067263603 MULTI CID FTMS 0 0 0 11073 365977.25 0.089811618848925 19 -1.4433212280273438 13 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]K[YV]DAD{I|L}NP{[QN]|[E{I|L}]|[KN]} 15 14 + 57.756 0.0 0.0 3.3045 3.3045 69.02 0.0 0.0 0.0 0.9129317568123696 2.03234439706371 0.9129317568123696 0.9129317568123696 0 0.4247425010840047 0.0 0.3807196863200844 1.4049471895720984 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]K[YV]DAD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}D{[QG]|[NA]}[H{I|L}]CAD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}NW[H{I|L}]CANNNP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAD{I|L}NP{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]K[YV]DANNNP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}D{[QG]|[NA]}[H{I|L}]CANNNP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N{[DA]|[EG]}[H{I|L}]CAD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[{M(Oxidation (M))|F}E][YV]DANNNP{[QN]|[E{I|L}]|[KN]};[NP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}K[YV]DAD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N{[DA]|[EG]}[H{I|L}]CANNNP{[QN]|[E{I|L}]|[KN]} 3.3045;3.2523;3.2319;3.2023;3.1575;3.1052;3.08;3.0552;3.0439;2.933 -;-;-;-;-;-;-;-;-;- 2089 1 1.481 97141.9 1.0 5736 5348 11073 HBL1_DMSO_200M_050219_1,11086 HBL1_DMSO_200M_050219_1,11086,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 11087 57.527 437.0 405520.0 25 0 29480.0 + 282 ADLLRTVGL 9 196 319.8624837877619 956.5656219634856 3 319.8623535037041 MULTI CID FTMS 0 0 0 11073 294518.78125 1.0 0 0.0 14 Unmodified _ADLLRTVGL_ REV__ENSG00000127603|ENST00000564288|MACF1;REV__ENST00000485063.1_1_1:39748843-39749872:+|nuORF;REV__nc|ENSG00000127603|Q9UPN3-2|MACF1;REV__nc|ENSG00000127603|Q9UPN3-3|MACF1;REV__nc|ENSG00000127603|Q9UPN3-4|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1 36.12702656103203 0.0967173616627612 3 DA{I|L}{M(Oxidation (M))|F}{I|L}R 6 -1 62.128 0.0 0.0 6.4949 0.0 0.0 0.0 238.1562899225219 238.1562899225219 34.47621246364342 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 DA{I|L}{M(Oxidation (M))|F}{I|L}R 6.4949 - 349 + 1 1.481 142922.5 1.0 5737 5348 11073 HBL1_DMSO_200M_050219_1,11087 HBL1_DMSO_200M_050219_1,11087,ADLLRTVGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11088 57.54 750.0 520590.0 25 0 87829.0 + 15468 IPRQSLRLV 9 263 361.2330457035524 1080.6773077108571 3 361.2327148318291 MULTI CID FTMS 0 0 0 11073 273162.03125 0.7820721296632223 -1 0.1483116149902343 15 Unmodified _IPRQSLRLV_ ENSG00000136573|ENST00000259089|BLK 43.9818466556824 0.0535980856389242 3 {I|L}VPGQS{I|L} 7 5 52.546 0.0 0.0 4.8624 0.0 0.0 0.0 383.2406710260376 383.2406710260376 40.32792085588199 0.0 0.0 0.0 0 0.4247425010840047 0.2518119729937995 0.2742275032520141 0.75 {I|L}VPGQS{I|L} 4.8624 - 564 + 1 1.481 313429.1 1.0 5738 5348 11073 HBL1_DMSO_200M_050219_1,11088 HBL1_DMSO_200M_050219_1,11088,IPRQSLRLV True True IPRQSLRLV 57.539549 361.232714831829 3444581.5 11073.0 ENSG00000136573|ENST00000259089|BLK 5.7487233479817705 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11089 57.55 578.0 312010.0 25 0 55711.0 + 45863 YYQQYQNYY 9 149 666.7802020836075 1331.545851234015 2 666.7806274294853 MULTI CID FTMS 0 0 0 11073 267159.5625 0.884989627458044 -2 0.1917190551757812 16 Unmodified _YYQQYQNYY_ ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28887839-28904145:+|nuORF;nc|ENSG00000180098|Q9NX07-2|TRNAU1AP 60.38955033654506 0.025866396858536 3 YYQQYQNYY 9 0 + 71.08 0.0 0.0 5.3382 5.3382 82.645 0.0 0.0 0.0 6.478174818886373 10.330145895351848 6.478174818886373 6.478174818886373 0 0.6677353201839438 2.0 0.0 1.1549471895720984 + + YYQQYQNYY;[AG]YYQYQNYY;[AG]YQYYQNYY;[AG]QYYYQNYY;YYQ[AG]YQNYY;YY[AG]QYQNYY;YYQQYQGGYY;YYQQY[AG]NYY;[YN]AAYYQNYY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GQYYQNYY 5.3382;4.8517;4.8123;4.8031;4.6466;4.6466;4.6466;4.6466;4.2967;4.2684 +;-;-;-;-;-;-;-;-;- + 6509 1 1.481 136606.7 1.0 5739 5348 11073 HBL1_DMSO_200M_050219_1,11089 HBL1_DMSO_200M_050219_1,11089,YYQQYQNYY True True YYQQYQNYY 57.549678 666.780627429485 3319166.5 11073.0 nc|ENSG00000180098|Q9NX07-2|TRNAU1AP;;ENST00000491577.5_1_1:28887839-28904145:+|nuORF;;ENSG00000180098|ENST00000373830|TRNAU1AP;;ENST00000484775.1_1_1:28887181-28904036:+|nuORF 5.703014691670735 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11090 57.553 162.0 407630.0 25 0 34332.0 + 10263 FQVGTSEEM 9 107 514.2238942864466 1026.433235639693 2 514.2231933474541 MULTI CID FTMS 0 0 0 11073 267601.71875 1.0 0 0.0 17 Unmodified _FQVGTSEEM_ ENSG00000126883|ENST00000359428|NUP214;ENST00000525980.5_1_9:134025776-134070755:+|nuORF;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214 14.838274106304384 0.4350285940865338 3 EM 2 7 21.326 0.0 0.0 2.0777 0.0 0.0 748.3390106414494 0.0 748.3390106414494 0.0 10.488313452533571 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 + EM 2.0777 + + 133 + 1 1.481 58325.1 1.0 5740 5348 11073 HBL1_DMSO_200M_050219_1,11090 HBL1_DMSO_200M_050219_1,11090,FQVGTSEEM False True FQVGTSEEM 57.552874 514.223193347454 3572913.25 11073.0 ENST00000525980.5_1_9:134025776-134070755:+|nuORF;;nc|ENSG00000126883|P35658-2|NUP214;;nc|ENSG00000126883|P35658-5|NUP214;;nc|ENSG00000126883|P35658-4|NUP214;;nc|ENSG00000126883|P35658-3|NUP214;;ENSG00000126883|ENST00000359428|NUP214 1.857748766740163 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11091 57.566 696.0 875210.0 25 0 54517.0 + 39276 VACSKDFSL 9 226 485.2373697943576 968.4601866555151 2 485.2376891970634 MULTI CID FTMS 0 0 0 11073 205889.28125 0.1046672542962069 -3 0.3172645568847656 18 Unmodified _VACSKDFSL_ REV__ENSG00000257017|ENST00000355906|HP;REV__ENSG00000261701|ENST00000540303|HPR;REV__nc|ENSG00000257017|P00738-2|HP;REV__nc|ENSG00000261701|P00739-2|HPR 23.1484247019978 0.2366544122328345 3 V{M(Oxidation (M))|F} 2 -1 31.946 0.0 0.0 3.2986 0.0 0.0 0.0 719.3189152986793 719.3189152986793 12.36433270654176 0.0 0.0 0.0 0 0.0519020776254365 1.5228787452803376 0.0 0.0 V{M(Oxidation (M))|F} 3.2986 - 3651 + 1 1.481 463854.2 1.0 5741 5348 11073 HBL1_DMSO_200M_050219_1,11091 HBL1_DMSO_200M_050219_1,11091,VACSKDFSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11092 57.58 800.0 440900.0 25 0 39613.0 35822 SVLARMLRE 9 274 358.87337622080014 1073.5982992626004 3 358.8734313845634 MULTI CID FTMS 0 0 0 11073 218495.28125 0.0383864283125436 4 -0.4391937255859375 19 Unmodified _SVLARMLRE_ ENSG00000173638|ENST00000311124|SLC19A1;nc|ENSG00000173638|P41440-2|SLC19A1;nc|ENSG00000173638|P41440-3|SLC19A1 27.628801355627647 0.1796483985696185 3 SV{I|L}A[TA][RN]SR 10 5 + 56.673 0.0 0.0 5.2788 5.2788 77.585 0.0 0.0 0.0 44.99084807471984 0.5416856987815493 0.5416856987815493 2.6979531151190628 0 0.342393031243744 2.0 0.3252574989159953 1.1237125054200234 SV{I|L}A[TA][RN]SR;SVA{I|L}[TA][RN]SR;SV{I|L}[NS]RRSR;SV[WK]Q[WK]{I|L};SV{I|L}WV{[DS]|[MA]|[CV]|TT}R{I|L};SV[WK]Q[{I|L}A]SR;SV{I|L}WV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PV;SV{I|L}WV{[DS]|[MA]|[CV]|TT}{I|L}R;SV{I|L}A{[MG]|[TS]}[RN]KV;SV{I|L}WVM[Q{I|L}]V 5.2788;5.0275;4.3449;4.1993;4.1079;4.0193;4.0076;3.9915;3.9649;3.9173 -;-;-;-;-;-;-;-;-;- 1511 + 1 1.481 280909.7 0.9399999976158142 5742 5348 11073 HBL1_DMSO_200M_050219_1,11092 HBL1_DMSO_200M_050219_1,11092,SVLARMLRE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11093 57.593 729.0 277590.0 25 0 48278.0 + -1 AGNFSCRSTQA 11 165 599.766742811393 0 599.7664672732353 PEAK CID FTMS 0 0 0 11073 172332.1875 1.0 0 0.0 20 Carbamidomethyl (C) _AGNFSC(Carbamidomethyl (C))RSTQA_ REV__nc|ENSG00000120437|Q9BWD1-2|ACAT2 14.40537977576856 0.4095794898365014 3 T{I|L}SGRT 6 -1 26.017 0.0 0.0 2.1726 0.0 0.0 384.0853522225921 195.07795129947505 579.1633035220672 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.2396518287104437 T{I|L}SGRT 2.1726 - 643 + 1 1.481 145574.0 1.0 5743 5348 11073 HBL1_DMSO_200M_050219_1,11093 HBL1_DMSO_200M_050219_1,11093,AGNFSCRSTQA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11095 57.597 12.0 3548400.0 25 0 823430.0 + 43814 YFDEHYEY 8 65 583.2272742267439 1164.4399955202878 2 583.2274047732353 MULTI CID FTMS 0 0 0 11094 4919136.5 0.8723716962875842 1 -0.0593109130859375 1 Unmodified _YFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 36.04419817259434 0.3004715606373109 3 Y{M(Oxidation (M))|F}YY{M(Oxidation (M))|F}D 6 5 57.326 0.0 0.0 4.923 0.0 0.0 0.0 263.0793856256469 263.0793856256469 16.863044005075736 0.0 0.0 0.0 0 0.3252574989159953 0.0 1.2302046884880935 0.0 Y{M(Oxidation (M))|F}YY{M(Oxidation (M))|F}D 4.923 - 389 + 1 1.481 38669.2 1.0 5744 5349 11094 HBL1_DMSO_200M_050219_1,11095 HBL1_DMSO_200M_050219_1,11095,YFDEHYEY False True YFDEHYEY 57.596757 583.227404773235 89403784.0 11094.0 ENSG00000123975|ENST00000314355|CKS2 6.501526832580566 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11096 57.598 13.0 4168500.0 25 0 408880.0 + 44643 YPFKPPKV 8 66 488.2869567505858 974.5593605679716 2 488.2870056033134 MULTI CID FTMS 0 0 0 11094 3788230.5 0.1116341951157412 -16 1.5003128051757812 2 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 23.1484247019978 0.5573009939494978 3 YP{M(Oxidation (M))|F}KV 5 3 56.37 0.0 0.0 5.7842 0.0 0.0 0.0 337.1883944147094 337.1883944147094 31.4755409084696 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 YP{M(Oxidation (M))|F}KV 5.7842 - 131 + 1 1.481 48992.6 1.0 5745 5349 11094 HBL1_DMSO_200M_050219_1,11096 HBL1_DMSO_200M_050219_1,11096,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11097 57.599 20.0 2593300.0 25 0 548180.0 + 41115 VNSDYYALY 9 74 554.2532091204239 1106.4918653076477 2 554.2535278201103 MULTI CID FTMS 0 0 0 11094 2737881.5 0.4306487481979173 -1 0.1092300415039062 3 Unmodified _VNSDYYALY_ REV__ENSG00000206190|ENST00000555815|ATP10A;REV__ENST00000555815.5_1_15:25924490-25961922:-|nuORF 29.081581746732265 0.1611639662936252 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[{M(Oxidation (M))|F}V]YDG 8 -1 55.679 0.0 0.0 5.032 0.0 0.0 0.0 125.07267175845938 125.07267175845938 39.4812969097282 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.805462187404089 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[{M(Oxidation (M))|F}V]YDG 5.032 - 223 + 1 1.481 44612.0 1.0 5746 5349 11094 HBL1_DMSO_200M_050219_1,11097 HBL1_DMSO_200M_050219_1,11097,VNSDYYALY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11098 57.6 31.0 1155600.0 25 0 145640.0 + 12611 GVISDTELQQA 11 75 580.7932170414017 1159.571881149603 2 580.7935668826103 MULTI CID FTMS 0 0 0 11094 2238194.25 0.703631767191662 1 -0.0593109130859375 4 Unmodified _GVISDTELQQA_ ENSG00000249915|ENST00000264933|PDCD6;ENST00000507290.5_1_5:1632852-1634017:-|nuORF;ENST00000507505.5_1_5:1599907-1634017:-|nuORF;ENST00000507841.5_1_5:1632852-1634017:-|nuORF;ENST00000515587.1_1_5:271739-272994:+|nuORF;nc|ENSG00000249915|O75340-2|PDCD6;nc|ENSG00000249915|O75340-3|PDCD6 25.399314129420983 0.4958189927824775 3 [AG]AE[QA]{I|L}R 8 8 20.934 0.0 0.0 1.8054 0.0 0.0 0.0 360.15364319477834 360.15364319477834 1.89342604689649 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [AG]AE[QA]{I|L}R 1.8054 - 407 1 1.481 35825.0 1.0 5747 5349 11094 HBL1_DMSO_200M_050219_1,11098 HBL1_DMSO_200M_050219_1,11098,GVISDTELQQA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11099 57.601 23.0 1928500.0 25 0 96915.0 + 7598 EINMRHGV 8 80 478.2427111609976 954.4708693887952 2 478.2424804568291 MULTI CID FTMS 0 0 0 11094 1852537.625 0.8337455658238319 -2 0.2575416564941406 5 Unmodified _EINMRHGV_ REV__ENSG00000162105|ENST00000601538|SHANK2;REV__ENSG00000251322|ENST00000262795|SHANK3;REV__ENST00000414786.6_1_22:51113069-51169737:+|nuORF;REV__nc|ENSG00000162105|Q9UPX8-1|SHANK2;REV__nc|ENSG00000162105|Q9UPX8-4|SHANK2;REV__nc|ENSG00000251322|Q9BYB0-3|SHANK3;REV__nc|ENSG00000251322|Q9BYB0|SHANK3 5.760428011301431 0.7893668129297577 3 V 1 -1 12.764 0.0 0.0 1.3373 0.0 0.0 837.3914683041256 0.0 837.3914683041256 0.0 2.050872325445248 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3373 + + 45 + 1 1.481 42860.2 1.0 5748 5349 11094 HBL1_DMSO_200M_050219_1,11099 HBL1_DMSO_200M_050219_1,11099,EINMRHGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11100 57.603 33.0 1763000.0 25 0 236160.0 + 5807 DPPYSRVI 8 79 473.7532497189813 945.4919465047626 2 473.7528564333916 MULTI CID FTMS 0 0 0 11094 1783695.625 0.4293821985772963 3 -0.3299636840820312 6 Unmodified _DPPYSRVI_ ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2 22.736283301280096 0.5659792798204337 3 DP{I|L}[{I|L}T]RTM 8 5 + 61.719 0.0 0.0 6.5277 6.5277 91.486 0.0 0.0 0.0 39.0232697082579 1.726307269461742 1.726307269461742 14.307232747762342 0 0.4247425010840047 2.0 0.3807196863200844 0.0 DP{I|L}[{I|L}T]RTM;[DP]PP[{I|L}T]{I|L}{[HG]|PP};{[{M(Oxidation (M))|F}C]|[YS]}R[{I|L}T]{I|L}{[HG]|PP};{[{M(Oxidation (M))|F}C]|[YS]}[VG][{I|L}T]{I|L}{[HG]|PP} 6.5277;5.0145;1.7196;0.74003 -;-;-;- 122 + 1 1.481 50606.1 1.0 5749 5349 11094 HBL1_DMSO_200M_050219_1,11100 HBL1_DMSO_200M_050219_1,11100,DPPYSRVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11101 57.604 24.0 2277300.0 25 0 229340.0 + 30618 RFIGAVNNM 9 87 511.2662172337422 1020.5178815342844 2 511.2664977908134 MULTI CID FTMS 0 0 0 11094 1658340.0 0.4512772841942876 1 -0.0593109130859375 7 Unmodified _RFIGAVNNM_ ENSG00000165175|ENST00000614558|MID1IP1 19.256988751693697 0.3154191944385105 3 AVNNM 5 4 25.401 0.0 0.0 2.489 0.0 0.0 473.277147361525 0.0 473.277147361525 0.0 12.926740567922437 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.0 + AVNNM 2.489 + + 130 1 1.481 49956.9 1.0 5750 5349 11094 HBL1_DMSO_200M_050219_1,11101 HBL1_DMSO_200M_050219_1,11101,RFIGAVNNM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11102 57.605 33.0 2167800.0 25 0 490180.0 + 15065 IMHIQSNFL 9 95 368.194404519104 1101.5613841575118 3 368.1943542361259 MULTI CID FTMS 0 0 0 11094 1414214.625 0.0800882844997303 38 -3.2229232788085938 8 Unmodified _IMHIQSNFL_ REV__ENSG00000157578|ENST00000288350|LCA5L 21.74664581756881 0.2544899275067181 3 QE{I|L}{M(Oxidation (M))|F} 4 -1 37.977 0.0 0.0 3.4476 0.0 0.0 566.2988148419937 0.0 566.2988148419937 0.0 23.373278429480425 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.8807196863200843 QE{I|L}{M(Oxidation (M))|F} 3.4476 - 270 1 1.481 65247.8 1.0 5751 5349 11094 HBL1_DMSO_200M_050219_1,11102 HBL1_DMSO_200M_050219_1,11102,IMHIQSNFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11103 57.606 42.0 1000500.0 25 0 123620.0 + 4599 DAYTHPQFV 9 65 539.2534162304771 1076.492279527754 2 539.2537719607353 MULTI CID FTMS 0 0 0 11094 1183881.0 0.2505764472561873 -3 0.3009490966796875 9 Unmodified _DAYTHPQFV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 34.40172386719151 0.1061884637610825 3 {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F}V 9 0 + 54.415 0.0 0.0 5.0549 5.0549 88.033 0.0 0.0 0.0 24.41962823435957 13.46787486224656 13.46787486224656 28.794934551318075 0 1.305462187404089 2.0 0.0 0.4247425010840047 + + {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F}V;{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}W[QP]{M(Oxidation (M))|F}V;{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}[QP]W{M(Oxidation (M))|F}V;YY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[QP]{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[YT]W{M(Oxidation (M))|F}V;[QP]H[YT]{[DA]|[EG]}{M(Oxidation (M))|F}V;[YQ]VV[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}V;[R{M(Oxidation (M))|F}][WD][HA]{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[YT]{[DA]|[EG]}{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG][YT]W{M(Oxidation (M))|F}V 5.0549;2.38;2.1951;1.5922;1.3664;0.93742;0.91436;0.61347;0.50604;0.50604 +;-;-;-;-;-;-;-;-;- + 112 + 1 1.481 40001.2 1.0 5752 5349 11094 HBL1_DMSO_200M_050219_1,11103 HBL1_DMSO_200M_050219_1,11103,DAYTHPQFV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11104 57.607 37.0 1269400.0 25 0 141580.0 + 44833 YPNTMVSSV 9 88 499.23647217414936 996.4583914150988 2 499.2364684939384 MULTI CID FTMS 0 0 0 11094 1094767.75 0.2974701992882161 -1 0.1092300415039062 10 Unmodified _YPNTMVSSV_ ENSG00000136738|ENST00000377524|STAM 49.93300154707207 0.0405168250806675 3 [YK]VYMT 6 7 38.773 0.0 0.0 3.8911 0.0 0.0 0.0 208.07341943912343 208.07341943912343 17.007046801327732 0.0 0.0 0.0 0 0.3054621874040891 0.0 1.079689690656103 0.0 [YK]VYMT 3.8911 - 489 + 1 1.481 41190.3 1.0 5753 5349 11094 HBL1_DMSO_200M_050219_1,11104 HBL1_DMSO_200M_050219_1,11104,YPNTMVSSV True True YPNTMVSSV 57.607386 499.236468493938 75612560.0 11094.0 ENSG00000136738|ENST00000377524|STAM 5.225461800893148 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11105 57.609 86.0 782120.0 25 0 85555.0 + 9933 FPGKHFQEI 9 92 551.7873955743806 1101.5602382155612 2 551.7878906130791 MULTI CID FTMS 0 0 0 11094 820289.5625 0.0622522504592518 38 -3.2229232788085938 11 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 61.08992128646608 0.0254786290039527 3 {M(Oxidation (M))|F}P[KG]H{M(Oxidation (M))|F}QE{I|L} 9 0 + 37.96 0.0 0.0 3.446 3.446 71.041 0.0 0.0 0.0 1.8676761552969623 3.798341433705312 1.8676761552969623 1.8676761552969623 0 1.298455006504028 0.0 0.8807196863200843 0.3807196863200844 + + {M(Oxidation (M))|F}P[KG]H{M(Oxidation (M))|F}QE{I|L};{[QN]|[E{I|L}]|[KN]}Q[VP]C(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}PYQ[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}[AG][VP]C(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}Q[VP][CG]P{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[AG][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}PY[AG][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}P[YK][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.446;3.2765;3.1012;2.9489;2.4406;2.4406;2.2604;2.1081;1.6127 +;-;-;-;-;-;-;-;- + 359 + 1 1.481 54803.4 1.0 5754 5349 11094 HBL1_DMSO_200M_050219_1,11105 HBL1_DMSO_200M_050219_1,11105,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11106 57.613 161.0 445420.0 25 0 51438.0 + -1 NYYDQGYGNYNSAY 14 96 846.3344064800036 1690.6542600268072 2 846.3351928591728 MULTI CID FTMS 0 0 0 11094 757099.0625 0.7765900157900507 -1 0.1092300415039062 12 2 Carbamidomethyl (C),Oxidation (M) _RM(Oxidation (M))WWYFGC(Carbamidomethyl (C))YFC(Carbamidomethyl (C))_ ENSG00000152795|ENST00000295470|HNRNPDL;nc|ENSG00000152795|O14979-2|HNRNPDL 0.0 0.8751479354844584 3 [YN]YDQGYGNY 10 -1 79.59 0.0 0.0 4.7076 0.0 0.0 0.0 450.1841421891697 450.1841421891697 61.75373472475883 0.0 0.0 0.0 0 0.0 2.0 1.0994850021680094 1.0994850021680094 [YN]YDQGYGNY 4.7076 - 8505 1 1.481 54042.2 1.0 5755 5349 11094 HBL1_DMSO_200M_050219_1,11106 HBL1_DMSO_200M_050219_1,11106,RMWWYFGCYFC False False NYYDQGYGNYNSAY 57.612505 846.335192859173 9506415.0 11094.0 ENSG00000152795|ENST00000295470|HNRNPDL;;nc|ENSG00000152795|O14979-2|HNRNPDL 7.718255201975505 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11107 57.616 175.0 654050.0 25 0 30500.0 + 10740 FYHPETTQL 9 149 568.2743928480368 1134.5342327628734 2 568.2748290896416 MULTI CID FTMS 0 0 0 11094 459040.40625 0.4880172218237719 1 -0.0593109130859375 13 Unmodified _FYHPETTQL_ ENSG00000114416|ENST00000357559|FXR1;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1 48.345845343767074 0.0439967357579942 3 {[QN]|[E{I|L}]|[KN]}GET[SG]TTQ{I|L} 11 7 + 46.531 0.0 0.0 4.1013 4.1013 70.441 0.0 0.0 0.0 2.785923086544649 16.575773191777937 2.785923086544649 0.5551732784983159 0 0.5138793319624578 0.0 1.110924374808178 0.2614393726401688 {[QN]|[E{I|L}]|[KN]}GET[SG]TTQ{I|L};{[QN]|[E{I|L}]|[KN]}GE[MN]TTQ{I|L};[VP]W{M(Oxidation (M))|F}[SG]TTQ{I|L};{[QN]|[E{I|L}]|[KN]}GET[MN]TQ{I|L};[AG]T{[MS]|[{M(Oxidation (M))|F}A]}[EP]TTQ{I|L};[EP]TTT[SG]TTQ{I|L};{[QN]|[E{I|L}]|[KN]}GEQ{[MS]|[{M(Oxidation (M))|F}A]}TQ{I|L};[EP]R{M(Oxidation (M))|F}[SG]TTQ{I|L};[EP]TT[MN]TTQ{I|L};{[QN]|[E{I|L}]|[KN]}GET[SG]TT[AG]{I|L} 4.1013;4.0524;3.8557;3.5217;3.3886;3.3844;3.3665;3.3515;3.3355;3.2967 -;-;-;-;-;-;-;-;-;- 2168 1 1.481 88437.7 1.0 5756 5349 11094 HBL1_DMSO_200M_050219_1,11107 HBL1_DMSO_200M_050219_1,11107,FYHPETTQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11108 57.619 135.0 503370.0 25 0 32066.0 + 32007 RVIDREGVYEI 11 67 450.245488522804 1347.714636168612 3 450.2461120486259 MULTI CID FTMS 0 0 0 11094 355607.875 0.2450627808720537 2 -0.1889801025390625 14 Unmodified _RVIDREGVYEI_ ENSG00000166199|ENST00000302708|ALKBH3;ENST00000533200.5_1_11:43904193-43919192:+|nuORF 9.5439744041441 0.8301188422821563 3 YE{I|L} 3 8 28.188 0.0 0.0 2.0915 0.0 0.0 924.5165929545036 0.0 924.5165929545036 0.0 10.48455006504028 0.0 0.0 0 0.5 0.0 0.0 0.0 + YE{I|L} 2.0915 + + 48 1 1.481 62363.3 1.0 5757 5349 11094 HBL1_DMSO_200M_050219_1,11108 HBL1_DMSO_200M_050219_1,11108,RVIDREGVYEI False True RVIDREGVYEI 57.618646 450.246112048626 25571472.0 11094.0 ENSG00000166199|ENST00000302708|ALKBH3;;ENST00000533200.5_1_11:43904193-43919192:+|nuORF 6.1581190427144366 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11109 57.621 96.0 875700.0 25 0 80136.0 + 33847 SLERLVAQV 9 112 507.800788688042 1013.587024442884 2 507.8008911013603 MULTI CID FTMS 0 0 0 11094 350824.6875 0.2484075562130355 2 -0.1889801025390625 15 Unmodified _SLERLVAQV_ REV__ENSG00000276231|ENST00000619866|PIK3R6 32.78568957990786 0.1150597335874693 3 {I|L}{I|L}[RD]TVAQV 9 -1 + 46.366 0.0 0.0 4.5744 4.5744 82.943 0.0 0.0 0.0 3.5810433208142456 31.67280924645823 3.5810433208142456 9.208187539523747 0 0.3054621874040891 1.3010299956639813 0.6989700043360187 0.0 {I|L}{I|L}[RD]TVAQV;{I|L}{I|L}[RD]TVA[AG]V;{I|L}{I|L}[RD]R[WR];{[VA]|[{I|L}G]}EVVR{[QD]|[EN]|[WG]|[KD]|[RS]}V 4.5744;3.6659;0.75898;0.34489 -;-;-;- 144 1 1.481 69689.3 1.0 5758 5349 11094 HBL1_DMSO_200M_050219_1,11109 HBL1_DMSO_200M_050219_1,11109,SLERLVAQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11110 57.624 170.0 778710.0 25 0 57649.0 + 28783 PYIIFREF 8 105 542.7931421868918 1083.5717314405836 2 542.7933837771416 MULTI CID FTMS 0 0 0 11094 358415.59375 0.007543433548946 38 -3.2229232788085938 16 Unmodified _PYIIFREF_ REV__ENST00000405409.6_2_22:36236246-36236354:-|nuORF 32.116972079565 0.368454113111938 3 YPP[KG]{I|L}NW 8 -1 68.796 0.0 0.0 6.349 0.0 0.0 0.0 125.072580205725 125.072580205725 55.38252756983438 0.0 0.0 0.0 0 1.3807196863200843 2.0 0.0 0.6139829889124311 YPP[KG]{I|L}NW 6.349 - 1530 + 1 1.481 110553.7 1.0 5759 5349 11094 HBL1_DMSO_200M_050219_1,11110 HBL1_DMSO_200M_050219_1,11110,PYIIFREF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11111 57.628 224.0 559960.0 25 0 54104.0 + 31259 RLVPSVNGV 9 132 470.7818765842435 939.549200235287 2 470.7827636599541 MULTI CID FTMS 0 0 0 11094 322181.78125 0.3665619392587196 -2 0.2575416564941406 17 Unmodified _RLVPSVNGV_ ENSG00000100714|ENST00000652337|MTHFD1;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 57.72198328787511 0.0273433238377839 3 [R{I|L}]V[PS]VNGV 9 0 + 51.418 0.0 0.0 5.4727 5.4727 76.775 0.0 0.0 0.0 1.7591359182653932 8.291261056018833 1.7591359182653932 1.7591359182653932 0 1.1307196863200843 0.0 0.4247425010840047 0.0 + + [R{I|L}]V[PS]VNGV;[{I|L}P]S{I|L}AAVNGV;[PS]{I|L}{I|L}AAVNGV;[{I|L}P]S[RV]VNGV;[PS]{I|L}[RV]VNGV;[PS]V[R{I|L}]VNGV;[R{I|L}]V[PS]VGGGV;[VS]P[R{I|L}]VNGV;[{I|L}P]S{I|L}AAVGGGV;[PS]{I|L}{I|L}AAVGGGV 5.4727;5.2854;5.2812;4.9981;4.9939;4.8908;4.4926;4.4312;4.31;4.3058 +;-;-;-;-;-;-;-;-;- + 1607 1 1.481 100519.3 1.0 5760 5349 11094 HBL1_DMSO_200M_050219_1,11111 HBL1_DMSO_200M_050219_1,11111,RLVPSVNGV True True RLVPSVNGV 57.628265 470.782763659954 8124286.5 11094.0 ENSG00000100714|ENST00000652337|MTHFD1;;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 5.589413960774739 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11112 57.638 541.0 195170.0 25 0 26557.0 -1 0 117 661.3401795827913 660.3329031161912 1 661.3384277224541 MULTI CID FTMS 0 0 0 11094 304724.40625 1.0 0 0.0 18 3 {[QN]|[E{I|L}]|[KN]}D{I|L}TA 6 -1 + 57.726 0.0 0.0 8.742 8.742 85.083 0.0 0.0 0.0 1.7609125905568137 14.69273760456403 1.7609125905568137 1.7609125905568137 0 0.75 1.6989700043360187 1.2302046884880935 0.0 {[QN]|[E{I|L}]|[KN]}D{I|L}TA;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}TA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}TA;{[QN]|[E{I|L}]|[KN]}DT{I|L}A;{NN|[MP]|[D{I|L}]|[EV]}ET{I|L}A;[{I|L}T]D{I|L}EA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}T{I|L}A;{[QN]|[E{I|L}]|[KN]}S{I|L}EA;{NN|[MP]|[D{I|L}]|[EV]}T{I|L}EA;[{I|L}T]{I|L}DEA 8.742;8.4753;8.2834;7.5956;7.3289;7.1898;7.137;6.7823;6.5156;6.4953 -;-;-;-;-;-;-;-;-;- 526 1 1.481 85563.5 1.0 5761 5349 11094 HBL1_DMSO_200M_050219_1,11112 HBL1_DMSO_200M_050219_1,11112, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11113 57.647 551.0 270980.0 25 0 48991.0 -1 IEQRTVSKMQL 11 127 674.8647542990667 0 674.8644286990166 PEAK CID FTMS 0 0 0 11094 299635.0 0.3207019727195683 2 -0.1889801025390625 19 Oxidation (M) _IEQRTVSKM(Oxidation (M))QL_ ENSG00000135249|ENST00000257700|RINT1 17.44264345198275 0.3815305483796679 3 QKC(Carbamidomethyl (C)){I|L} 4 -1 18.047 0.0 0.0 1.3391 0.0 0.0 67.05963447528332 748.3279512994749 815.3875857747582 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 QKC(Carbamidomethyl (C)){I|L} 1.3391 - 643 + 1 1.481 109457.1 1.0 5762 5349 11094 HBL1_DMSO_200M_050219_1,11113 HBL1_DMSO_200M_050219_1,11113,IEQRTVSKMQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11114 57.652 243.0 1033400.0 25 0 135730.0 + 4402 DAVRIVHI 8 194 308.18717671653326 921.5397007497996 3 308.1870300173759 MULTI CID FTMS 0 0 0 11094 275612.09375 0.1685002015601327 -3 0.3009490966796875 20 Unmodified _DAVRIVHI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-5|BRCC3;nc|ENSG00000185515|P46736|BRCC3 39.94969957227396 0.2351327405675156 3 DAVR{I|L}VH{I|L} 8 0 + 67.485 0.0 0.0 7.3231 7.3231 86.741 0.0 0.0 0.0 29.719712763997563 4.559319556497243 4.559319556497243 4.559319556497243 0 0.9049471895720984 1.6989700043360187 0.0 0.0 + + DAVR{I|L}VH{I|L};DAVR{I|L}V{I|L}H;DA{I|L}[RV]VH{I|L};DA{I|L}[RV]V{I|L}H;WV[VG]{I|L}VH{I|L};WV[VG]{I|L}V{I|L}H;W{I|L}AA{I|L}VH{I|L};W{I|L}AA{I|L}V{I|L}H;[RV]{I|L}VADH{I|L};[RV]{I|L}ADVH{I|L} 7.3231;6.8283;5.615;5.1203;4.0981;3.6033;3.3396;2.8449;2.1032;1.3696 +;-;-;-;-;-;-;-;-;- + 234 + 1 1.481 200230.9 1.0 5763 5349 11094 HBL1_DMSO_200M_050219_1,11114 HBL1_DMSO_200M_050219_1,11114,DAVRIVHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11116 57.656 31.0 1422400.0 25 0 108270.0 + 30172 QVTNEFQTV 9 79 533.2642881875158 1064.5140234418316 2 533.2643310427666 MULTI CID FTMS 0 0 0 11115 1684841.75 0.978204244571418 2 -0.2706527709960937 1 Unmodified _QVTNEFQTV_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 71.13359017698441 0.0206607516130725 3 {[TV]|[{I|L}S]}QWWQ{[MS]|[{M(Oxidation (M))|F}A]} 8 6 + 29.063 0.0 0.0 2.7302 2.7302 67.681 0.0 0.0 0.0 0.7828960255241384 0.2018122933698478 0.2018122933698478 0.7828960255241384 0 0.0 1.2218487496163564 0.7742275032520141 0.5 {[TV]|[{I|L}S]}QWWQ{[MS]|[{M(Oxidation (M))|F}A]};{[QV]|[N{I|L}]|[RA]|[KV]}TWWQ{[MS]|[{M(Oxidation (M))|F}A]};[AG]SE{[QV]|[N{I|L}]|[RA]|[KV]}EQ{[MS]|[{M(Oxidation (M))|F}A]};[AG]DT{[QV]|[N{I|L}]|[RA]|[KV]}EQ{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}QWW[AG]{[MS]|[{M(Oxidation (M))|F}A]};[AG]TD{[QV]|[N{I|L}]|[RA]|[KV]}EQ{[MS]|[{M(Oxidation (M))|F}A]};{[QV]|[N{I|L}]|[RA]|[KV]}TWW[AG]{[MS]|[{M(Oxidation (M))|F}A]};{[QV]|[N{I|L}]|[RA]|[KV]}YY{M(Oxidation (M))|F}Q{[MS]|[{M(Oxidation (M))|F}A]};{[QS]|[NT]}E{[QV]|[N{I|L}]|[RA]|[KV]}EQ{[MS]|[{M(Oxidation (M))|F}A]};[KA]EWWQ{[MS]|[{M(Oxidation (M))|F}A]} 2.7302;2.6567;2.2605;2.1976;1.8601;1.8123;1.7866;1.7413;1.7213;1.6998 -;-;-;-;-;-;-;-;-;- 626 1 1.458 42349.1 1.0 5764 5350 11115 HBL1_DMSO_200M_050219_1,11116 HBL1_DMSO_200M_050219_1,11116,QVTNEFQTV True True QVTNEFQTV 57.656177 533.264331042767 26962664.0 11115.0 ENSG00000163535|ENST00000357799|SGO2;;nc|ENSG00000163535|Q562F6-2|SGO2 6.828946431477864 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11117 57.657 43.0 787140.0 25 0 85365.0 -1 GIKCANKMQ 9 71 504.7502765219611 1007.4860001107222 2 504.7504455447197 MULTI CID FTMS 0 0 0 11115 831909.625 0.7986885731443475 1 -0.129669189453125 2 Oxidation (M) _GIKCANKM(Oxidation (M))Q_ ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3 8.593279151180031 0.6146971463335029 3 {I|L} 1 -1 11.259 0.0 0.0 1.1175 0.0 0.0 876.3905544093535 0.0 876.3905544093535 0.0 -1.443977696234846 -1.443977696234846 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1175 + + 47 + 1 1.458 31657.1 1.0 5765 5350 11115 HBL1_DMSO_200M_050219_1,11117 HBL1_DMSO_200M_050219_1,11117,GIKCANKMQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11118 57.659 33.0 2510100.0 25 0 377470.0 + 4404 DAVRIVHI 8 87 461.7772639315938 921.5399749299876 2 461.7772399783134 MULTI CID FTMS 0 0 0 11115 1871214.625 0.3324272945333973 -2 0.1685409545898437 3 Unmodified _DAVRIVHI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-5|BRCC3;nc|ENSG00000185515|P46736|BRCC3 34.93206674587334 0.3190774572298582 3 {[DA]|[EG]}VR{I|L}VH{I|L} 8 0 + 66.235 0.0 0.0 7.1874 7.1874 94.861 0.0 0.0 0.0 19.463950151760656 35.85593167151288 19.463950151760656 30.859146287065933 0 1.110924374808178 1.3979400086720375 0.0 0.0 + + {[DA]|[EG]}VR{I|L}VH{I|L};{[QG]|[NA]}[KQ]{I|L}VH{I|L} 7.1874;3.8388 +;- + 113 1 1.458 67040.5 1.0 5766 5350 11115 HBL1_DMSO_200M_050219_1,11118 HBL1_DMSO_200M_050219_1,11118,DAVRIVHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11119 57.66 65.0 668760.0 25 0 49923.0 + 35750 SVIEQGGIQTV 11 84 565.8061539050117 1129.5977548768233 2 565.8057128787041 MULTI CID FTMS 0 0 0 11115 893037.125 1.0 0 0.0 4 Unmodified _SVIEQGGIQTV_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000562423.5_1_15:29046609-29050027:+|nuORF;ENST00000566321.5_1_15:29046634-29050027:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 36.506200033944 0.2662161991516171 3 [VS]{I|L}E 4 7 25.406 0.0 0.0 2.2491 0.0 0.0 0.0 698.3469973907482 698.3469973907482 -0.4264923712806556 0.0 -0.4264923712806556 0.0 0 0.0 2.0 0.0 0.0 + [VS]{I|L}E 2.2491 + + 335 1 1.458 40536.9 1.0 5767 5350 11115 HBL1_DMSO_200M_050219_1,11119 HBL1_DMSO_200M_050219_1,11119,SVIEQGGIQTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11120 57.662 90.0 691330.0 25 0 65454.0 9563 FLIGKGGG 8 85 374.7212447062148 747.4279364792296 2 374.7213317751884 MULTI CID FTMS 0 0 0 11115 649561.25 1.0 0 0.0 5 Unmodified _FLIGKGGG_ ENSG00000115677|ENST00000310931|HDLBP;ENST00000479169.5_1_2:242177863-242181895:-|nuORF;ENST00000487169.5_1_2:242174673-242189369:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP 8.593279151180031 0.7721714526254883 3 {M(Oxidation (M))|F}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 6 4 + 30.623 0.0 0.0 4.0971 4.0971 82.698 0.0 0.0 0.0 16.64320017660792 8.940162615404077 8.940162615404077 10.77955014859348 0 0.0 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{M(Oxidation (M))|F}{I|L}[KP]M{I|L} 4.0971;2.6548 -;- 53 + 1 1.458 55994.9 1.0 5768 5350 11115 HBL1_DMSO_200M_050219_1,11120 HBL1_DMSO_200M_050219_1,11120,FLIGKGGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11121 57.664 64.0 1097800.0 25 0 98069.0 34332 SLSHRTTL 8 117 457.7566782260564 913.4988035189128 2 457.7569152712822 MULTI CID FTMS 0 0 0 11115 589964.75 0.1047080343725546 4 -0.4320182800292969 6 Unmodified _SLSHRTTL_ ENST00000435880.6_1_2:70190299-70191494:-|nuORF 18.13498045792455 0.6430038125133779 3 {[DA]|[EG]}[R{I|L}]TK[NP] 8 7 + 15.072 0.0 0.0 1.6499 1.6499 67.36 0.0 0.0 0.0 1.249387366082999 1.294161579347632 1.249387366082999 1.249387366082999 0 0.0 2.0 0.0 0.0 {[DA]|[EG]}[R{I|L}]TK[NP];{[NV]|[RG]}{I|L}ETK[NP];{[TV]|[{I|L}S]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}K[NP];{[DA]|[EG]}[R{I|L}][EP][{I|L}T];{[NV]|[RG]}{I|L}E[EP][{I|L}T];[QT]K{[QD]|[EN]|[WG]|[KD]|[RS]}VPV;{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}TK[NP];{[SA]|[TG]}A{I|L}N[QP][{I|L}T];{[MS]|[{M(Oxidation (M))|F}A]}[HT][KP]T{I|L};[{I|L}T]V{[QD]|[EN]|[WG]|[KD]|[RS]}K[NP] 1.6499;1.5131;1.1962;0.76519;0.62842;0.55521;0.49921;0.1296;0.074166;0.068021 -;-;-;-;-;-;-;-;-;- 1193 1 1.458 58592.0 1.0 5769 5350 11115 HBL1_DMSO_200M_050219_1,11121 HBL1_DMSO_200M_050219_1,11121,SLSHRTTL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11122 57.666 115.0 765380.0 25 0 69679.0 37803 TLSMLYID 8 122 319.1646054627283 954.4719869883849 3 319.1644164919853 MULTI CID FTMS 0 0 0 11115 538147.8125 1.0 0 0.0 7 Unmodified _TLSMLYID_ ENSG00000106066|ENST00000265394|CPVL 8.593279151180031 0.7721714526254883 3 V 1 8 13.979 0.0 0.0 1.4646 0.0 0.0 837.3923417630904 0.0 837.3923417630904 0.0 0.1671187774347498 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4646 - 53 + 1 1.458 72428.7 1.0 5770 5350 11115 HBL1_DMSO_200M_050219_1,11122 HBL1_DMSO_200M_050219_1,11122,TLSMLYID False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11123 57.674 429.0 197930.0 25 0 17438.0 -1 0 71 789.0879076430742 2364.2418935294227 3 789.4216186404228 MULTI CID FTMS 0 0 0 11115 391730.0 1.0 0 0.0 8 3 NTM 3 -1 30.445 0.0 0.0 1.2877 0.0 0.0 2000.065710997641 0.0 2000.065710997641 0.0 9.655593552960935 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 NTM 1.2877 - 329 1 1.458 68826.8 1.0 5771 5350 11115 HBL1_DMSO_200M_050219_1,11123 HBL1_DMSO_200M_050219_1,11123, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11124 57.677 188.0 552990.0 25 0 48706.0 + 4149 DAPHPPLKI 9 106 329.8590105895294 986.5552023687884 3 329.8582946658134 MULTI CID FTMS 0 0 0 11115 363950.03125 0.0084165132658297 12 -0.8325958251953125 9 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 14.838274106304384 0.4350285940865338 3 {I|L}H[HQ] 4 8 11.682 0.0 0.0 1.1842 0.0 0.0 453.2975025861344 0.0 453.2975025861344 0.0 1.0865056093281744 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}H[HQ] 1.1842 - 46 1 1.458 90681.2 1.0 5772 5350 11115 HBL1_DMSO_200M_050219_1,11124 HBL1_DMSO_200M_050219_1,11124,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11125 57.685 455.0 282570.0 25 0 13835.0 + 8127 EPKIMKVTV 9 141 522.8095530940494 1043.6045532548987 2 522.8098632693291 MULTI CID FTMS 0 0 0 11115 297664.78125 1.0 0 0.0 10 Unmodified _EPKIMKVTV_ ENSG00000135018|ENST00000376395|UBQLN1;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;nc|ENSG00000135018|Q9UMX0-4|UBQLN1 28.49450938151212 0.1686335738423394 3 EPK{I|L}MKVTV 9 0 + 36.786 0.0 0.0 3.5249 3.5249 74.099 0.0 0.0 0.0 11.205422564636724 3.679767852945943 3.679767852945943 3.679767852945943 0 0.1989700043360188 0.0 0.3807196863200844 0.0 + + EPK{I|L}MKVTV;EPK{I|L}MKVS{I|L};[{I|L}A]KHMKV{[MS]|[{M(Oxidation (M))|F}A]};[HV]VKM[RK]{M(Oxidation (M))|F};[HV][HA]K[RP]TV;[HV][HA]K[RP]S{I|L};[VP][RP]MKV{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}P][WR]RV{[MS]|[{M(Oxidation (M))|F}A]};[HV]VRMKK{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[PG][QA]KV{[MS]|[{M(Oxidation (M))|F}A]} 3.5249;3.1723;1.7614;1.7029;1.1918;0.8392;0.83001;0.58983;0.38038;0.23612 +;-;-;-;-;-;-;-;-;- + 988 + 1 1.458 111115.3 1.0 5773 5350 11115 HBL1_DMSO_200M_050219_1,11125 HBL1_DMSO_200M_050219_1,11125,EPKIMKVTV False True EPKIMKVTV 57.685409 522.809863269329 1547562.25 11115.0 nc|ENSG00000135018|Q9UMX0-2|UBQLN1;;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;;ENSG00000135018|ENST00000376395|UBQLN1 5.4556911786397295 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11126 57.694 495.0 135900.0 25 0 8249.6 -1 0 87 881.9127604281156 1761.810967923031 2 881.9208251833916 MULTI CID FTMS 0 0 0 11115 268024.5625 0.1996173823249793 10 -0.8103485107421875 11 3 [NP]T[{I|L}P][NP]EAED 11 -1 23.95 0.0 0.0 1.3594 0.0 0.0 0.0 581.2366020385185 581.2366020385185 6.0353834873791605 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3807196863200844 0.0 [NP]T[{I|L}P][NP]EAED 1.3594 - 714 1 1.458 51185.8 1.0 5774 5350 11115 HBL1_DMSO_200M_050219_1,11126 HBL1_DMSO_200M_050219_1,11126, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11127 57.702 459.0 358990.0 25 0 19678.0 -1 0 151 657.6464475542298 1969.917513262889 3 657.6465331912041 MULTI CID FTMS 0 0 0 11115 273870.71875 1.0 0 0.0 12 3 H{I|L}R{I|L}D[{M(Oxidation (M))|F}T]TE 9 -1 43.84 0.0 0.0 2.2255 0.0 0.0 839.3448587088052 0.0 839.3448587088052 0.0 -1.6034222145880506 -1.6034222145880506 0.0 0 2.0 0.0 0.6549471895720985 0.0 H{I|L}R{I|L}D[{M(Oxidation (M))|F}T]TE 2.2255 - 22054 + 1 1.458 125618.1 1.0 5775 5350 11115 HBL1_DMSO_200M_050219_1,11127 HBL1_DMSO_200M_050219_1,11127, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11128 57.714 651.0 281350.0 25 0 9025.7 -1 0 120 1158.7649510356086 3473.2730237070264 3 1159.098925769329 MULTI CID FTMS 0 0 0 11115 227688.34375 0.6265259043768167 4 -0.4320182800292969 13 3 AAP 3 -1 10.802 0.0 0.0 0.311 0.0 0.0 2951.9748802517515 279.14704309635005 3231.121923348101 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AAP 0.311 - 397 + 1 1.458 113432.6 1.0 5776 5350 11115 HBL1_DMSO_200M_050219_1,11128 HBL1_DMSO_200M_050219_1,11128, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11129 57.722 465.0 341550.0 25 0 34737.0 + + -1 YVYPDERTAL 10 140 613.7650357607791 0 613.7659789919853 PEAK CID FTMS 0 0 0 11115 231485.65625 0.6806678088406842 -2 0.1685409545898437 14 Oxidation (M) _YVDIDGDM(Oxidation (M))SPV_ ENSG00000145391|ENST00000274031|SETD7 24.020572477871973 0.3025672323349825 3 PYS 3 -1 22.369 0.0 0.0 1.8253 0.0 0.0 163.06224796616408 712.2826021783811 875.3448501445453 0.0 0.0 0.0 0.0 0 1.1421590589602533 0.0 0.6421590589602533 0.0 PYS 1.8253 - 869 + 1 1.458 120851.0 1.0 5777 5350 11115 HBL1_DMSO_200M_050219_1,11129 HBL1_DMSO_200M_050219_1,11129,YVDIDGDMSPV False False YVYPDERTAL 57.721961 613.765978991985 318686.46875 11115.0 ENSG00000145391|ENST00000274031|SETD7 1.979470133781433 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11130 57.728 243.0 806290.0 25 0 111570.0 + 10047 FPPLSGPV 8 158 407.22923442369887 0 407.2285644412041 PEAK CID FTMS 0 0 0 11115 227280.046875 1.0 0 0.0 15 Unmodified _FPPLSGPV_ REV__ENST00000263980.7_1_1:27480949-27481393:-|nuORF 15.768221252438446 0.4767174489346095 3 {I|L}C(Carbamidomethyl (C))PKE 5 -1 14.302 0.0 0.0 1.7603 0.0 0.0 100.056233884704 82.06703363590077 182.1232675206048 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.1382104921644452 0.0 {I|L}C(Carbamidomethyl (C))PKE 1.7603 - 1409 + 1 1.458 154862.6 1.0 5778 5350 11115 HBL1_DMSO_200M_050219_1,11130 HBL1_DMSO_200M_050219_1,11130,FPPLSGPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11131 57.738 583.0 466830.0 25 0 110420.0 -1 EAAARIRMS 9 204 340.8473808377779 1019.5203131135338 3 340.8469726443291 MULTI CID FTMS 0 0 0 11115 230709.265625 1.0 0 0.0 16 Oxidation (M) _EAAARIRM(Oxidation (M))S_ ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295 4.189502756095605 0.7684307469601125 3 [HA]N 3 -1 13.49 0.0 0.0 1.3231 0.0 0.0 0.0 694.358026086443 694.358026086443 1.8959050761367529 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 [HA]N 1.3231 - 86 1 1.458 216287.3 1.0 5779 5350 11115 HBL1_DMSO_200M_050219_1,11131 HBL1_DMSO_200M_050219_1,11131,EAAARIRMS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11132 57.748 550.0 193700.0 25 0 12970.0 + 34393 DGRSPISI 8 158 423.2570466131144 0 423.2569763064384 PEAK CID FTMS 0 0 0 11115 199669.640625 1.0 0 0.0 17 Unmodified _SLVAQKSI_ ENST00000461320.5_1_1:150239547-150241394:-|nuORF;ENSG00000117362|ENST00000369109|APH1A;nc|ENSG00000117362|Q96BI3-2|APH1A 13.50788311687929 0.5021269579892848 3 S 1 7 5.401 0.0 0.0 0.63955 0.0 0.0 626.3722952752539 128.07229028873283 754.4445855639867 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 + S 0.63955 + + 27 + 1 1.458 83010.9 1.0 5780 5350 11115 HBL1_DMSO_200M_050219_1,11132 HBL1_DMSO_200M_050219_1,11132,SLVAQKSI False False DGRSPISI 57.747506 423.256976306438 1896212.25 11115.0 ENST00000461320.5_1_1:150239547-150241394:-|nuORF;;ENSG00000117362|ENST00000369109|APH1A;;nc|ENSG00000117362|Q96BI3-2|APH1A 1.840747952461243 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11133 57.758 576.0 413490.0 25 0 39123.0 7406 EGKLAPIA 8 231 399.7384437305786 0 399.7383605837822 PEAK CID FTMS 0 0 0 11115 210967.4375 0.4779028887643135 3 -0.3614006042480469 18 Unmodified _EGKLAPIA_ ENSG00000159648|ENST00000441824|TEPP;nc|ENSG00000159648|Q6URK8-2|SPMIP8 5.760428011301431 0.5786759180849727 3 V 1 8 3.4332 0.0 0.0 0.43052 0.0 0.0 300.1576297933853 395.2035311334594 695.3611609268447 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 V 0.43052 - 5 + 1 1.458 185481.8 1.0 5781 5350 11115 HBL1_DMSO_200M_050219_1,11133 HBL1_DMSO_200M_050219_1,11133,EGKLAPIA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11134 57.769 569.0 178320.0 25 0 9481.4 42714 VVAGVVPST 9 155 414.7432499621232 0 414.7430602908134 PEAK CID FTMS 0 0 0 11115 188788.90625 0.6211346449322568 -1 0.0593109130859375 19 Unmodified _VVAGVVPST_ ENST00000383693.7_1_3:100120104-100120320:+|nuORF 9.347437153973935 0.3197567915069932 3 {I|L} 1 9 7.034 0.0 0.0 0.85006 0.0 0.0 413.2118589556932 298.1533297174438 711.365188673137 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {I|L} 0.85006 - 6 + 1 1.458 80587.4 1.0 5782 5350 11115 HBL1_DMSO_200M_050219_1,11134 HBL1_DMSO_200M_050219_1,11134,VVAGVVPST False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11135 57.782 743.0 433700.0 25 0 36158.0 -1 0 269 301.1998408021965 600.385128671193 2 301.1996948122978 MULTI CID FTMS 0 0 0 11115 202287.578125 1.0 0 0.0 20 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L} 5 -1 + 37.618 0.0 0.0 6.2657 6.2657 79.683 0.0 0.0 0.0 19.030899869919445 1.8241772537187515 1.8241772537187515 1.8241772537187515 0 0.0126524983387718 1.3010299956639813 0.0 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}K;[K{I|L}]{I|L}D{I|L} 6.2657;5.9618;2.6626 -;-;- 56 + 1 1.458 254925.0 1.0 5783 5350 11115 HBL1_DMSO_200M_050219_1,11135 HBL1_DMSO_200M_050219_1,11135, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11137 57.786 0.32 96855000.0 25 0 8432500.0 + 4008 DALRSGLTV 9 53 466.26395573800335 930.5133585428068 2 466.2645141482353 MULTI CID FTMS 0 0 0 11136 163368800.0 0.6736143506301715 1 -0.1409835815429687 1 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 33.4449034751529 0.1114409586740657 3 {[DA]|[EG]}{I|L}R[SG]{I|L}TV 9 0 + 51.021 0.0 0.0 5.4831 5.4831 86.766 0.0 0.0 0.0 9.34878345338852 16.478174818886373 9.34878345338852 9.34878345338852 0 1.742992819099939 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}{I|L}R[SG]{I|L}TV;{[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[TV]|[{I|L}S]}AAN[KQ]TV;{[DA]|[EG]}{I|L}R[KT]EV;{[SA]|[TG]}[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[SA]|[TG]}[{I|L}A]N[KQ]TV 5.4831;4.4784;4.4784;3.9261;3.3716;3.3716 +;-;-;-;-;- + 92 1 1.432 30400.5 1.0 5784 5351 11136 HBL1_DMSO_200M_050219_1,11137 HBL1_DMSO_200M_050219_1,11137,DALRSGLTV True True DALRSGLTV 57.785737 466.264514148235 6073713664.0 11136.0 nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 6.604087034861247 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11138 57.787 6.2 5147200.0 25 0 450550.0 + 19699 LGLTNQPEL 9 68 492.77147364149215 983.5283943497844 2 492.7717162966728 MULTI CID FTMS 0 0 0 11136 5523953.0 0.2098684048558582 1 -0.1409835815429687 2 Unmodified _LGLTNQPEL_ ENSG00000179626|ENST00000641569|OR6C4 42.09456458481378 0.0639583784996157 3 {[VA]|[{I|L}G]}{I|L}N 4 5 24.922 0.0 0.0 2.5339 0.0 0.0 0.0 583.2738526840218 583.2738526840218 -0.2287874528033739 0.0 -0.2287874528033739 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}N 2.5339 - 71 1 1.432 29494.8 1.0 5785 5351 11136 HBL1_DMSO_200M_050219_1,11138 HBL1_DMSO_200M_050219_1,11138,LGLTNQPEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11139 57.788 4.9 20727000.0 25 0 3867700.0 + 44630 YPFKPPKV 8 81 325.86048683472575 974.5596311043772 3 325.8601867556572 MULTI CID FTMS 0 0 0 11136 9827917.0 0.1274161035401232 -16 1.4966583251953125 3 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 52.797 0.0 0.0 5.4175 5.4175 83.992 0.0 0.0 0.0 12.285234531782102 6.4476266894289935 6.4476266894289935 7.723989214945526 0 0.25 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;YP{M(Oxidation (M))|F}KPV[KP];YP{M(Oxidation (M))|F}KVP[KP];Y[{I|L}T]KPP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T]K[HS]KV;{[HG]|PP}KK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.4175;4.625;4.4443;2.1368;1.476;1.0912;0.80522;0.25711 +;-;-;-;-;-;-;- + 241 + 1 1.432 86836.1 1.0 5786 5351 11136 HBL1_DMSO_200M_050219_1,11139 HBL1_DMSO_200M_050219_1,11139,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11140 57.789 41.0 1538300.0 25 0 105340.0 + 31125 RLMNDMTAV 9 89 525.7572504084756 0 525.7572509646416 PEAK CID FTMS 0 0 0 11136 1054106.5 0.559335545731176 -1 0.129669189453125 4 Unmodified _RLMNDMTAV_ ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1 36.506200033944 0.0788933506710822 3 ATMDN 5 7 31.669 0.0 0.0 3.0175 0.0 0.0 117.07656028785102 397.2038668268188 514.2804271146698 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.5 0.0 ATMDN 3.0175 - 308 + 1 1.432 58714.3 1.0 5787 5351 11136 HBL1_DMSO_200M_050219_1,11140 HBL1_DMSO_200M_050219_1,11140,RLMNDMTAV True True RLMNDMTAV 57.789283 525.757250964642 23595376.0 11136.0 nc|ENSG00000120694|Q92598-4|HSPH1;;nc|ENSG00000120694|Q92598-2|HSPH1;;ENSG00000120694|ENST00000320027|HSPH1;;nc|ENSG00000120694|Q92598-3|HSPH1 6.5047562917073565 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11141 57.791 62.0 977180.0 25 0 139850.0 + 18413 KVVEELTRI 9 62 543.8294851509842 1085.6444173687682 2 543.8297607302666 MULTI CID FTMS 0 0 0 11136 922743.125 0.6331797404990166 -1 0.129669189453125 5 Unmodified _KVVEELTRI_ ENSG00000167986|ENST00000301764|DDB1;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;ENST00000538470.2_1_11:61067610-61070684:-|nuORF;ENST00000540166.5_1_11:61067610-61069753:-|nuORF;ENST00000545894.1_1_11:61067610-61068439:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1 27.22323531849824 0.1848086127304535 3 KVVEE{I|L} 6 3 57.384 0.0 0.0 5.2857 0.0 0.0 0.0 385.2214449518188 385.2214449518188 31.18562527100117 0.0 0.0 0.0 0 0.9247425010840048 1.0 0.0 0.0 + KVVEE{I|L} 5.2857 + + 113 + 1 1.432 51044.3 1.0 5788 5351 11136 HBL1_DMSO_200M_050219_1,11141 HBL1_DMSO_200M_050219_1,11141,KVVEELTRI False True KVVEELTRI 57.79081 543.829760730267 10097760.0 11136.0 ENST00000545894.1_1_11:61067610-61068439:-|nuORF;;ENSG00000167986|ENST00000301764|DDB1;;nc|ENSG00000167986|Q16531-2|DDB1;;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;;ENST00000538470.2_1_11:61067610-61070684:-|nuORF;;ENST00000540166.5_1_11:61067610-61069753:-|nuORF 3.853241443634033 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11142 57.793 79.0 566660.0 25 0 23426.0 -1 0 69 591.817351091449 2363.240298499396 4 592.0688354372978 MULTI CID FTMS 0 0 0 11136 719060.0625 0.2901296426195913 1 -0.1409835815429687 6 3 Y 1 -1 13.099 0.0 0.0 0.55428 0.0 0.0 2182.165528457207 0.0 2182.165528457207 0.0 -3.3547064036788754 -3.3547064036788754 0.0 0 0.0 0.0 0.0 0.0 Y 0.55428 - 26 + 1 1.432 46597.4 1.0 5789 5351 11136 HBL1_DMSO_200M_050219_1,11142 HBL1_DMSO_200M_050219_1,11142, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11143 57.794 72.0 1199000.0 25 0 135350.0 + 30613 RFHEMHVAL 9 75 380.5306974976321 1138.5702630930964 3 380.5303527712822 MULTI CID FTMS 0 0 0 11136 639969.1875 0.5848562126886323 -1 0.129669189453125 7 Unmodified _RFHEMHVAL_ ENSG00000131653|ENST00000326181|TRAF7;nc|ENSG00000131653|Q6Q0C0-2|TRAF7 19.62595529434964 0.305431704817896 3 PPHEMHVA{I|L} 9 2 45.583 0.0 0.0 4.0036 0.0 0.0 109.06465346504062 0.0 109.06465346504062 0.0 23.78775668552009 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 PPHEMHVA{I|L} 4.0036 - 133 1 1.432 78550.6 1.0 5790 5351 11136 HBL1_DMSO_200M_050219_1,11143 HBL1_DMSO_200M_050219_1,11143,RFHEMHVAL False True RFHEMHVAL 57.7943 380.530352771282 15191197.0 11136.0 ENSG00000131653|ENST00000326181|TRAF7;;nc|ENSG00000131653|Q6Q0C0-2|TRAF7 6.913565794626872 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11144 57.796 85.0 828590.0 25 0 87375.0 + 14252 IEDDEFRV 8 103 511.7447996406749 1021.4750463481496 2 511.7453491091728 MULTI CID FTMS 0 0 0 11136 368441.96875 0.3073834699674089 11 -0.7029266357421875 8 Unmodified _IEDDEFRV_ REV__ENSG00000236543|ENST00000430816|unknown 10.823927491677226 0.7510103885582552 3 {I|L}ED 3 -1 23.188 0.0 0.0 2.27 0.0 0.0 0.0 661.2971285455686 661.2971285455686 3.945202964068845 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}ED 2.27 + + 119 + 1 1.432 62883.9 1.0 5791 5351 11136 HBL1_DMSO_200M_050219_1,11144 HBL1_DMSO_200M_050219_1,11144,IEDDEFRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11145 57.806 553.0 487320.0 25 0 58922.0 + 44092 YIYHGTVKL 9 192 365.2066290771435 1092.5980578316305 3 365.2069885134697 MULTI CID FTMS 0 0 0 11136 302691.75 1.0 0 0.0 9 Unmodified _YIYHGTVKL_ ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4 53.832793166522166 0.0319663582346103 3 Y{I|L}YHG{[TV]|[{I|L}S]}K{I|L} 9 0 + 73.424 0.0 0.0 6.7201 6.7201 83.87 0.0 0.0 0.0 36.478174818886366 3.498064637233142 3.498064637233142 3.498064637233142 0 0.2396518287104437 2.0 0.7302046884880937 1.0114393726401687 + + Y{I|L}YHG{[TV]|[{I|L}S]}K{I|L};Y{I|L}YHG{[TV]|[{I|L}S]}{I|L}K;Y{I|L}{I|L}[HV][KS]S{M(Oxidation (M))|F};Y{I|L}{I|L}[HV][YT]GK;Y{I|L}{I|L}[HV][HV]NV;Y{I|L}{I|L}[HV][HV]GGV 6.7201;6.3999;4.6657;3.1906;2.43;1.0463 +;-;-;-;-;- + 556 + 1 1.432 211510.9 1.0 5792 5351 11136 HBL1_DMSO_200M_050219_1,11145 HBL1_DMSO_200M_050219_1,11145,YIYHGTVKL True True YIYHGTVKL 57.805912 365.20698851347 3224898.25 11136.0 nc|ENSG00000123444|Q9NVX7-1|KBTBD4;;ENSG00000123444|ENST00000430070|KBTBD4;;nc|ENSG00000123444|Q9NVX7-3|KBTBD4 4.442895650863648 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11146 57.815 499.0 420390.0 25 0 38523.0 + 38376 TQVDAQLQV 9 198 501.266080268314 0 501.2664672732353 PEAK CID FTMS 0 0 0 11136 264923.65625 0.8857849271190152 -1 0.129669189453125 10 Unmodified _TQVDAQLQV_ ENSG00000155827|ENST00000389120|RNF20 57.72198328787511 0.0192479126618854 3 {I|L}QADVE 6 7 44.532 0.0 0.0 4.4509 0.0 0.0 245.1321314798316 97.04145227603748 342.17358375586906 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 1.341129063296272 0.4247425010840047 {I|L}QADVE 4.4509 - 1599 + 1 1.432 156434.7 1.0 5793 5351 11136 HBL1_DMSO_200M_050219_1,11146 HBL1_DMSO_200M_050219_1,11146,TQVDAQLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11147 57.823 490.0 518060.0 25 0 124810.0 + 22840 LRSLRKILN 9 143 556.8662508745319 1111.7179488158638 2 556.8660156130791 MULTI CID FTMS 0 0 0 11136 251661.53125 0.3641031653116658 -1 0.129669189453125 11 Unmodified _LRSLRKILN_ REV__ENST00000473968.5_2_X:101854504-101854693:+|nuORF 18.1463463914782 0.3454829746528889 3 [VG]V{I|L}TE{I|L}{I|L} 8 -1 29.333 0.0 0.0 2.6385 0.0 0.0 0.0 284.16688413515186 284.16688413515186 6.502117498999631 0.0 0.0 0.0 0 0.3807196863200844 1.0969100130080565 0.0 0.0 [VG]V{I|L}TE{I|L}{I|L} 2.6385 - 646 1 1.432 195037.9 1.0 5794 5351 11136 HBL1_DMSO_200M_050219_1,11147 HBL1_DMSO_200M_050219_1,11147,LRSLRKILN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11148 57.833 539.0 173240.0 25 0 13978.0 14438 IFQHCFYKSL 10 121 643.3242684994332 1284.6339840656665 2 643.3251220583916 MULTI CID FTMS 0 0 0 11136 207838.65625 1.0 0 0.0 12 Unmodified _IFQHCFYKSL_ ENST00000510714.1_1_5:466550-472987:-|nuORF 26.268140514670165 0.3785003716575977 3 KY{M(Oxidation (M))|F}DVVEWS{I|L} 10 8 + 47.328 0.0 0.0 3.6841 3.6841 71.858 0.0 0.0 0.0 9.32225142898104 2.04628427264403 2.04628427264403 2.04628427264403 0 2.288106835214472 0.0 0.3054621874040891 0.0 KY{M(Oxidation (M))|F}DVVEWS{I|L};KY{M(Oxidation (M))|F}DVVEWTV;KY{M(Oxidation (M))|F}DVVS{NN|[MP]|[D{I|L}]|[EV]}S{I|L};KY{M(Oxidation (M))|F}DVVS{NN|[MP]|[D{I|L}]|[EV]}TV;[VG]GS{I|L}W{I|L}YYD{I|L};[{M(Oxidation (M))|F}V]Q{I|L}TYEWS{I|L};[VG]GS{I|L}V[C(Carbamidomethyl (C))C]YKS{I|L};KY{M(Oxidation (M))|F}DVVS{M(Oxidation (M))|F}[PA]{I|L};[{M(Oxidation (M))|F}V][WR]YEWS{I|L};[VG]SVAW{I|L}YYD{I|L} 3.6841;3.5249;3.421;3.2618;2.9585;2.9528;2.9294;2.8526;2.8365;2.7827 -;-;-;-;-;-;-;-;-;- 6199 + 1 1.432 76454.5 1.0 5795 5351 11136 HBL1_DMSO_200M_050219_1,11148 HBL1_DMSO_200M_050219_1,11148,IFQHCFYKSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11149 57.845 711.0 105840.0 25 0 22281.0 -1 0 40 1099.788139889955 3296.342590270064 3 1100.121874988079 MULTI CID FTMS 0 0 0 11136 204390.140625 0.5997181808428992 2 -0.2317314147949218 13 3 T 1 -1 9.732 0.0 0.0 0.29524 0.0 0.0 2498.9475229866644 693.3220308893186 3192.269553875983 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T 0.29524 - 6 + 1 1.432 69409.9 1.0 5796 5351 11136 HBL1_DMSO_200M_050219_1,11149 HBL1_DMSO_200M_050219_1,11149, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11150 57.855 553.0 630990.0 25 0 42379.0 + + 20145 YPALKGVNTV 10 248 531.3576376837972 1060.7007224343945 2 531.3575927615166 MULTI CID FTMS 0 0 0 11136 173998.515625 0.0470831415208863 9 -0.6806793212890625 14 Unmodified _LKPGILPVPK_ ENSG00000147383|ENST00000370274|NSDHL 23.80106514851385 0.4339316747945569 3 K{I|L}AP{I|L}VKEV 9 -1 73.121 0.0 0.0 6.8936 0.0 0.0 0.0 80.05137811832265 80.05137811832265 47.29505635200249 0.0 0.0 0.0 0 1.805462187404089 0.4089353929735008 1.0189301784845295 0.0 K{I|L}AP{I|L}VKEV 6.8936 - 3282 + 1 1.432 264165.4 1.0 5797 5351 11136 HBL1_DMSO_200M_050219_1,11150 HBL1_DMSO_200M_050219_1,11150,LKPGILPVPK False False YPALKGVNTV 57.854964 531.357592761517 932239.1875 11136.0 ENSG00000147383|ENST00000370274|NSDHL 2.87273899714152 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11151 57.867 636.0 125220.0 25 0 6388.5 43522 WWWWIWWQWW 10 104 874.9044782998504 1747.7944036665008 2 875.9006225466728 MULTI CID FTMS 0 0 0 11136 196881.953125 0.0942499070399621 22 -1.6960678100585938 15 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.4583401331227399 0.7245164002484112 3 D{I|L}DACWSWR{I|L}Q 11 9 65.145 0.0 0.0 3.7273 0.0 0.0 356.1350541565383 0.0 356.1350541565383 0.0 47.29023686886171 0.0 0.0 0 0.0 0.0 0.0 0.6989700043360187 D{I|L}DACWSWR{I|L}Q 3.7273 - 5710 + 1 1.432 56249.0 1.0 5798 5351 11136 HBL1_DMSO_200M_050219_1,11151 HBL1_DMSO_200M_050219_1,11151,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 11152 57.877 567.0 205780.0 25 0 13446.0 + -1 RVLPESNSDVDQL 13 124 736.372814620102 1470.7310763070038 2 736.3755981326103 MULTI CID FTMS 0 0 0 11136 181062.125 1.0 0 0.0 16 Oxidation (M) _RFLYRDVM(Oxidation (M))LEN_ ENSG00000128513|ENST00000357628|POT1;nc|ENSG00000128513|Q9NUX5-2|POT1 10.799506525563784 0.8105043987015127 3 [RV]{I|L}[TP]DNSDVDQ{I|L} 13 -1 + 69.347 0.0 0.0 4.7151 4.7151 76.38 0.0 0.0 0.0 5.484643223280592 56.87263219210902 5.484643223280592 3.0102999566398125 0 1.0994850021680094 0.0 0.0 0.566901560044258 [RV]{I|L}[TP]DNSDVDQ{I|L};[RV]{I|L}[EP]SNSDVDQ{I|L};[RV]{I|L}[TP]DNSDVD[AG]{I|L};[RV]{I|L}[TP]DGGSDVDQ{I|L};[RV]{I|L}[EP]SGGSDVDQ{I|L};[RV]{I|L}[EP]SNSDVD[AG]{I|L};[RV]{I|L}[TP]DN[WD]DQ{I|L};{[QN]|[E{I|L}]|[KN]}[TP][Q{I|L}]NSDVDQ{I|L};[RV]{I|L}[TP][C(Carbamidomethyl (C))R]DVDQ{I|L};[RV]{I|L}[EP]SN[WD]DQ{I|L} 4.7151;4.5104;4.0983;4.0983;3.8936;3.8936;3.2588;3.2295;3.1933;3.0541 -;-;-;-;-;-;-;-;-;- 418 1 1.432 89811.6 1.0 5799 5351 11136 HBL1_DMSO_200M_050219_1,11152 HBL1_DMSO_200M_050219_1,11152,RFLYRDVMLEN False False RVLPESNSDVDQL 57.877205 736.37559813261 1054189.25 11136.0 ENSG00000128513|ENST00000357628|POT1;;nc|ENSG00000128513|Q9NUX5-2|POT1 7.656632264455159 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11153 57.887 538.0 342010.0 25 0 29491.0 + 16345 IYMEPEKQVM 10 143 634.3064245806236 1266.598296228047 2 634.3041869997978 MULTI CID FTMS 0 0 0 11136 179306.34375 0.4737287031491573 -1 0.129669189453125 17 Unmodified _IYMEPEKQVM_ ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1 91.08480475639789 0.0092558408645064 3 {I|L}YMEPEKQVM 10 0 + 103.77 0.0 0.0 8.1929 8.1929 92.788 0.0 0.0 0.0 19.497107099006698 12.376558577268597 12.376558577268597 9.164539485499247 0 2.524227503252014 2.0 0.75 0.6139829889124311 + + {I|L}YMEPEKQVM;{I|L}YMEPEK[AG]VM;{I|L}YMEPEKQMV;[EP]KQEMY{I|L}VM;[EP]KQVEMY{I|L}M;{I|L}YMEPEK[AG]MV;{I|L}YMEPE{[VA]|[{I|L}G]}[KG]M;{I|L}YMEPEKNP{M(Oxidation (M))|F};{I|L}YMEV{[QG]|[NA]}[TP]VM;{I|L}YMEP[PA]M[KG]M 8.1929;7.4694;7.2158;6.6536;6.5216;6.4922;6.3973;6.3354;6.1203;5.9622 +;-;-;-;-;-;-;-;-;- + 4914 + 1 1.432 142449.1 1.0 5800 5351 11136 HBL1_DMSO_200M_050219_1,11153 HBL1_DMSO_200M_050219_1,11153,IYMEPEKQVM True True IYMEPEKQVM 57.886683 634.304186999798 2509450.5 11136.0 nc|ENSG00000133706|Q9P2J5-2|LARS1;;ENSG00000133706|ENST00000394434|LARS1;;ENST00000508667.5_1_5:145522961-145531505:-|nuORF 7.596889654795329 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11154 57.9 694.0 122790.0 25 0 9970.3 -1 IMPACLAV 8 141 437.7293430859339 873.4441332386679 2 437.7282897830009 MULTI CID FTMS 0 0 0 11136 176501.515625 1.0 0 0.0 18 Carbamidomethyl (C) _IMPAC(Carbamidomethyl (C))LAV_ ENST00000482953.5_1_21:42762201-42762450:+|nuORF 11.114462752807354 0.7467182956244686 3 {I|L} 1 -1 13.099 0.0 0.0 1.4997 0.0 0.0 742.3490995246038 0.0 742.3490995246038 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4997 + + 103 + 1 1.432 71694.9 1.0 5801 5351 11136 HBL1_DMSO_200M_050219_1,11154 HBL1_DMSO_200M_050219_1,11154,IMPACLAV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11155 57.91 602.0 284730.0 25 0 14493.0 + + 14284 KLVDEEPQL 9 165 535.7900493488451 1069.56554576449 2 535.7895385622978 MULTI CID FTMS 0 0 0 11136 165313.71875 0.8075963263339878 -1 0.129669189453125 19 Unmodified _IEKDVEQPL_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2;ENST00000465687.1_1_3:88367908-88368169:+|nuORF 36.506200033944 0.094635877243972 3 {NN|[MP]|[D{I|L}]|[EV]}KVEEPQ{I|L} 9 -1 + 41.761 0.0 0.0 3.9045 3.9045 72.582 0.0 0.0 0.0 2.206440484779854 6.158865412066703 2.206440484779854 2.206440484779854 0 0.3807196863200844 0.4202164033831898 0.75 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}KVEEPQ{I|L};[K{I|L}]DVEEPQ{I|L};{[VA]|[{I|L}G]}SVVEEPQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}K{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{I|L};{[VA]|[{I|L}G]}A[{I|L}T]EEPQ{I|L};[K{I|L}]VDEEPQ{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEEVPQ{I|L};[QP][C(Carbamidomethyl (C))S][K{I|L}]PQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PEEV[QP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}KVEEP[AG]{I|L} 3.9045;3.6982;3.5534;3.4917;3.3739;3.3261;3.2486;3.1375;3.112;3.0435 -;-;-;-;-;-;-;-;-;- 2701 1 1.432 139314.4 1.0 5802 5351 11136 HBL1_DMSO_200M_050219_1,11155 HBL1_DMSO_200M_050219_1,11155,IEKDVEQPL False False KLVDEEPQL 57.910453 535.789538562298 0.0 11136.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2;;ENST00000465687.1_1_3:88367908-88368169:+|nuORF 4.282430807749431 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11156 57.922 692.0 394080.0 25 0 25587.0 -1 DVSTETCV 8 203 455.69550098467056 909.3764490361413 2 455.6961547732353 MULTI CID FTMS 0 0 0 11136 148265.265625 0.7525847609663183 -2 0.1889801025390625 20 Carbamidomethyl (C) _DVSTETC(Carbamidomethyl (C))V_ ENSG00000094914|ENST00000209873|AAAS;ENST00000546572.1_1_12:53702939-53703546:-|nuORF;ENST00000550033.5_1_12:53701834-53703447:-|nuORF;nc|ENSG00000094914|Q9NRG9-2|AAAS 19.438996006549623 0.6237395211498085 3 VD 2 -1 30.982 0.0 0.0 3.4069 0.0 0.0 0.0 692.2586022264 692.2586022264 10.09613938658271 0.0 0.0 0.0 0 0.0519020776254365 0.5686362358410126 0.3807196863200844 0.0 VD 3.4069 - 1723 + 1 1.432 206244.5 1.0 5803 5351 11136 HBL1_DMSO_200M_050219_1,11156 HBL1_DMSO_200M_050219_1,11156,DVSTETCV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11158 57.927 26.0 1647700.0 25 0 312680.0 + 43686 YAYDGKDYL 9 66 554.2532091204239 1106.4918653076477 2 554.2532836794853 MULTI CID FTMS 0 0 0 11157 2036443.25 0.3203176384327073 2 -0.1613655090332031 1 Unmodified _YAYDGKDYL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 20.41453444215458 0.284085796332423 3 YAY[{M(Oxidation (M))|F}V]YDG 8 5 60.935 0.0 0.0 5.507 0.0 0.0 0.0 125.07256494693594 125.07256494693594 44.15205560610346 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 YAY[{M(Oxidation (M))|F}V]YDG 5.507 - 232 + 1 1.419 38269.1 1.0 5804 5352 11157 HBL1_DMSO_200M_050219_1,11158 HBL1_DMSO_200M_050219_1,11158,YAYDGKDYL False True YAYDGKDYL 57.926732 554.253283679485 93448800.0 11157.0 nc|ENSG00000204632|P17693-4|HLA-G;;nc|ENSG00000204632|P17693-5|HLA-G;;ENSG00000204632|ENST00000360323|HLA-G 3.454158067703247 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11159 57.928 9.9 5973700.0 25 0 562210.0 + 44644 YPFKPPKV 8 69 488.2869567505858 974.5593605679716 2 488.2867614626884 MULTI CID FTMS 0 0 0 11157 9885443.0 0.291311067968947 -13 1.2564773559570312 2 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 61.151 0.0 0.0 6.2748 6.2748 92.718 0.0 0.0 0.0 40.86101611759766 4.781381439366186 4.781381439366186 47.67851293743831 0 0.3807196863200844 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6.2748;1.3825 +;- + 151 + 1 1.419 52019.9 1.0 5805 5352 11157 HBL1_DMSO_200M_050219_1,11159 HBL1_DMSO_200M_050219_1,11159,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11160 57.929 13.0 3141900.0 25 0 347980.0 + 4600 DAYTHPQFV 9 71 539.2534162304771 1076.492279527754 2 539.2532226443291 MULTI CID FTMS 0 0 0 11157 4724630.0 1.0 0 0.0 3 Unmodified _DAYTHPQFV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 47.74868867922204 0.0453060283459952 3 {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F}V 9 0 + 55.652 0.0 0.0 5.1698 5.1698 87.972 0.0 0.0 0.0 11.308422131034844 11.308422131034844 11.308422131034844 21.87653158479249 0 1.7302046884880935 2.0 0.0 0.4247425010840047 + + {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F}V;{[DA]|[EG]}Y[YG]{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}V;{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}[QP]W{M(Oxidation (M))|F}V;[HT]Y{[DA]|[EG]}[QP]{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]YW{M(Oxidation (M))|F}V;[QP][HT]Y{[DA]|[EG]}{M(Oxidation (M))|F}V;[HT]Y[QP]{[DA]|[EG]}{M(Oxidation (M))|F}V;[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]}SM;[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}SM;[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}Y[WK]M 5.1698;3.1376;2.1661;1.6648;1.2189;1.1435;1.1263;1.0583;0.9422;0.90604 +;-;-;-;-;-;-;-;-;- + 195 + 1 1.419 38868.3 1.0 5806 5352 11157 HBL1_DMSO_200M_050219_1,11160 HBL1_DMSO_200M_050219_1,11160,DAYTHPQFV True True DAYTHPQFV 57.92909 539.253222644329 98761264.0 11157.0 ENST00000444025.1_1_7:23602199-23602811:-|nuORF;;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;;ENST00000515678.5_1_4:146042303-146044753:+|nuORF;;ENSG00000164163|ENST00000296577|ABCE1 9.920573711395264 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11161 57.93 20.0 3109200.0 25 0 755270.0 + 5077 DGYFGGARV 9 73 471.2272629417913 940.4399729503826 2 471.2269775271416 MULTI CID FTMS 0 0 0 11157 2877441.5 0.8251856364880847 -2 0.2706527709960937 4 Unmodified _DGYFGGARV_ ENSG00000044446|ENST00000379942|PHKA2;ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1 10.073929032068715 0.563993802247229 3 {M(Oxidation (M))|F}V 2 7 15.217 0.0 0.0 1.618 0.0 0.0 335.11092939094607 356.1691988580688 691.2801282490149 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}V 1.618 - 68 + 1 1.419 55796.9 1.0 5807 5352 11157 HBL1_DMSO_200M_050219_1,11161 HBL1_DMSO_200M_050219_1,11161,DGYFGGARV False True DGYFGGARV 57.930267 471.226977527142 51891556.0 11157.0 nc|ENSG00000067177|P46020-2|PHKA1;;ENSG00000067177|ENST00000373542|PHKA1;;nc|ENSG00000067177|P46020-3|PHKA1;;ENSG00000044446|ENST00000379942|PHKA2 4.852858861287435 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11162 57.932 52.0 999270.0 25 0 108310.0 + 44834 YPNTMVSSV 9 90 499.23647217414936 996.4583914150988 2 499.2364379763603 MULTI CID FTMS 0 0 0 11157 1789785.75 0.4863204307358426 2 -0.1613655090332031 5 Unmodified _YPNTMVSSV_ ENSG00000136738|ENST00000377524|STAM 37.97399986684836 0.0865783450051559 3 [PA]SGMYV 7 6 45.287 0.0 0.0 4.5448 0.0 0.0 0.0 288.1145553157425 288.1145553157425 20.32072067447388 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.5114393726401687 0.0 [PA]SGMYV 4.5448 - 351 1 1.419 44361.4 1.0 5808 5352 11157 HBL1_DMSO_200M_050219_1,11162 HBL1_DMSO_200M_050219_1,11162,YPNTMVSSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11163 57.933 39.0 2216900.0 25 0 185440.0 + 4403 DAVRIVHI 8 98 308.18717671653326 921.5397007497996 3 308.1869079470634 MULTI CID FTMS 0 0 0 11157 1635678.125 1.0 0 0.0 6 Unmodified _DAVRIVHI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-5|BRCC3;nc|ENSG00000185515|P46736|BRCC3 30.63653989081413 0.3996269429323407 3 DAVR{I|L}VH{I|L} 8 0 + 37.718 0.0 0.0 4.0929 4.0929 72.033 0.0 0.0 0.0 24.95338056366395 1.5490195998574308 1.5490195998574308 1.5490195998574308 0 0.4564608101803796 1.6989700043360187 0.0 0.0 + + DAVR{I|L}VH{I|L};DAVR{I|L}V{I|L}H;DA{I|L}[RV]VH{I|L};DA{I|L}[RV]V{I|L}H;[HV][K{I|L}]VAQQ 4.0929;3.9248;3.142;2.9739;0.20447 +;-;-;-;- + 115 + 1 1.419 72112.9 1.0 5809 5352 11157 HBL1_DMSO_200M_050219_1,11163 HBL1_DMSO_200M_050219_1,11163,DAVRIVHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11164 57.934 49.0 1229800.0 25 0 265630.0 + 9939 FPGKHFQEI 9 94 368.194404519104 1101.5613841575118 3 368.1939880251884 MULTI CID FTMS 0 0 0 11157 1282484.875 0.0726283067081144 41 -3.3083229064941406 7 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 13.042465956692816 0.4836390050082244 3 H{I|L} 2 7 13.979 0.0 0.0 1.2691 0.0 0.0 833.4101019496933 0.0 833.4101019496933 0.0 5.026975159433532 0.0 0.0 0 0.0 0.0 0.0 0.0 H{I|L} 1.2691 - 60 + 1 1.419 53373.7 1.0 5810 5352 11157 HBL1_DMSO_200M_050219_1,11164 HBL1_DMSO_200M_050219_1,11164,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11165 57.936 73.0 1655000.0 25 0 144740.0 20546 LLLTLVEVII 10 95 375.9201947044989 1124.7387547136966 3 375.9201537966728 MULTI CID FTMS 0 0 0 11157 1035222.3125 0.3506755321099418 -2 0.2706527709960937 8 Unmodified _LLLTLVEVII_ ENSG00000170412|ENST00000392627|GPRC5C;nc|ENSG00000170412|Q9NQ84-2|GPRC5C 15.738622578938676 0.5834632108994704 3 {I|L}WV{I|L}{I|L} 5 6 33.488 0.0 0.0 2.9774 0.0 0.0 482.3344288556656 0.0 482.3344288556656 0.0 23.84643433451714 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {I|L}WV{I|L}{I|L} 2.9774 - 69 1 1.419 101538.4 1.0 5811 5352 11157 HBL1_DMSO_200M_050219_1,11165 HBL1_DMSO_200M_050219_1,11165,LLLTLVEVII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11166 57.939 142.0 498040.0 25 0 47299.0 + 9934 FPGKHFQEI 9 102 551.7873955743806 1101.5602382155612 2 551.7880126833916 MULTI CID FTMS 0 0 0 11157 819545.0 0.0621957451794683 41 -3.3083229064941406 9 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 47.7319792270244 0.0453426645642791 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E 9 3 + 63.126 0.0 0.0 5.7306 5.7306 81.472 0.0 0.0 0.0 17.508403133631987 4.146518864155127 4.146518864155127 4.146518864155127 0 0.805462187404089 1.6989700043360187 0.7742275032520141 0.9247425010840048 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQE{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H{M(Oxidation (M))|F}Q{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HDAA{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]E{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H{M(Oxidation (M))|F}QE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H{M(Oxidation (M))|F}[AG]{I|L}E 5.7306;5.3542;5.1892;5.0035;4.8947;4.7465;4.5183;4.462;4.3533;4.1675 -;-;-;-;-;-;-;+;-;- + 1567 1 1.419 59761.8 1.0 5812 5352 11157 HBL1_DMSO_200M_050219_1,11166 HBL1_DMSO_200M_050219_1,11166,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11167 57.942 161.0 1155400.0 25 0 122430.0 26917 PDPRYLSV 8 147 473.7532497189813 945.4919465047626 2 473.7524902224541 MULTI CID FTMS 0 0 0 11157 754547.5625 0.1816393373266192 6 -0.4627685546875 10 Unmodified _PDPRYLSV_ ENSG00000101191|ENST00000395343|DIDO1;nc|ENSG00000101191|Q9BTC0-1|DIDO1 42.09456458481378 0.1992492688217789 3 DP{I|L}[YR]PSV 8 3 + 69.936 0.0 0.0 7.3968 7.3968 84.386 0.0 0.0 0.0 38.40374799363782 9.244062225872824 9.244062225872824 2.887254899964347 0 0.4247425010840047 2.0 0.8516784832448856 0.3807196863200844 DP{I|L}[YR]PSV;DPPY[R{I|L}]SV;DP{I|L}{M(Oxidation (M))|F}[R{I|L}]SV;DP{I|L}[YR]SPV;DPPY[RV]TV;DPPY[RV]S{I|L};DP{I|L}{M(Oxidation (M))|F}[RV]TV;DP{I|L}{M(Oxidation (M))|F}[RV]S{I|L};DP{I|L}[YR]SVP;DP{I|L}{M(Oxidation (M))|F}VWAV 7.3968;7.0914;6.7731;6.5538;6.4784;6.3238;6.16;6.0054;5.687;5.1328 -;-;-;-;-;-;-;-;-;- 1042 + 1 1.419 143292.5 1.0 5813 5352 11157 HBL1_DMSO_200M_050219_1,11167 HBL1_DMSO_200M_050219_1,11167,PDPRYLSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11168 57.943 67.0 1001600.0 25 0 57741.0 + 43627 YALACKGVM 9 92 478.2427111609976 954.4708693887952 2 478.2424499392509 MULTI CID FTMS 0 0 0 11157 519104.84375 0.2336262194265747 1 -0.0907478332519531 11 Unmodified _YALACKGVM_ REV__ENSG00000112367|ENST00000230124|FIG4 7.910154910731844 0.6385446671287552 3 N{I|L}VM 4 -1 15.75 0.0 0.0 1.6502 0.0 0.0 479.2096119611344 0.0 479.2096119611344 0.0 3.7607815260865607 0.0 0.0 0 0.0 0.0 0.0 0.0 N{I|L}VM 1.6502 - 220 1 1.419 58912.7 1.0 5814 5352 11157 HBL1_DMSO_200M_050219_1,11168 HBL1_DMSO_200M_050219_1,11168,YALACKGVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11169 57.952 464.0 321750.0 25 0 30324.0 + 23990 LVVEFTGGDEV 11 157 582.7904910359933 1163.5664291387866 2 582.7921020388603 MULTI CID FTMS 0 0 0 11157 377485.6875 1.0 0 0.0 12 Unmodified _LVVEFTGGDEV_ REV__CON__Q0VCM5 16.149105407346934 0.6992268271266642 3 {[YC]|[HE]}DY{M(Oxidation (M))|F}E{I|L}{I|L}V 9 -1 + 38.08 0.0 0.0 3.2727 3.2727 68.6 0.0 0.0 0.0 3.5627985603336114 15.996133633720234 3.5627985603336114 0.7082530717588753 0 0.3252574989159953 0.0 0.850576203518622 0.0 {[YC]|[HE]}DY{M(Oxidation (M))|F}E{I|L}{I|L}V;{[YC]|[HE]}DY{M(Oxidation (M))|F}{I|L}{I|L}EV;{[YC]|[HE]}DYE{M(Oxidation (M))|F}{I|L}{I|L}V;[YE]HD{M(Oxidation (M))|F}E{I|L}{I|L}V;[YE]HD{M(Oxidation (M))|F}{I|L}{I|L}EV;{[YC]|[HE]}D{M(Oxidation (M))|F}YE{I|L}{I|L}V;{[YC]|[HE]}D{M(Oxidation (M))|F}Y{I|L}{I|L}EV;[YE]HDE{M(Oxidation (M))|F}{I|L}{I|L}V;{[YC]|[HE]}YD{M(Oxidation (M))|F}E{I|L}{I|L}V;{[YC]|[HE]}YD{M(Oxidation (M))|F}{I|L}{I|L}EV 3.2727;3.2118;3.0528;2.9665;2.9056;2.8626;2.8017;2.7466;2.5464;2.4855 -;-;-;-;-;-;-;-;-;- 1238 1 1.419 115919.9 1.0 5815 5352 11157 HBL1_DMSO_200M_050219_1,11169 HBL1_DMSO_200M_050219_1,11169,LVVEFTGGDEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11170 57.961 513.0 339920.0 25 0 46585.0 + 17552 KPPHVILV 8 146 451.7948252443465 0 451.7946960330009 PEAK CID FTMS 0 0 0 11157 370972.9375 0.8134743714266567 -2 0.2706527709960937 13 Unmodified _KPPHVILV_ ENSG00000119203|ENST00000238112|CPSF3 67.03532852164291 0.0045761810975176 3 {I|L}{I|L}KPV 5 7 41.498 0.0 0.0 4.6028 0.0 0.0 117.07757217063768 231.08942590885 348.1669980794877 0.0 0.0 0.0 0.0 0 1.075257498915995 0.0 0.0 0.7302046884880937 {I|L}{I|L}KPV 4.6028 - 566 + 1 1.419 141802.7 1.0 5816 5352 11157 HBL1_DMSO_200M_050219_1,11170 HBL1_DMSO_200M_050219_1,11170,KPPHVILV True True KPPHVILV 57.96067 451.794696033001 4044836.5 11157.0 ENSG00000119203|ENST00000238112|CPSF3 4.716965198516846 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11171 57.97 539.0 366840.0 25 0 26214.0 + 28668 PVPDKLGA 8 201 398.7305494689636 0 398.7307617068291 PEAK CID FTMS 0 0 0 11157 372126.40625 0.7968206654404365 -9 0.968303680419922 14 Unmodified _PVPDKLGA_ REV__ENSG00000134453|ENST00000379888|RBM17 5.760428011301431 0.5786759180849727 3 {M(Oxidation (M))|F}VQ 3 -1 7.0834 0.0 0.0 0.8905 0.0 0.0 162.06277022523346 256.16721521549067 418.22998544072414 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {M(Oxidation (M))|F}VQ 0.8905 - 30 + 1 1.419 154934.1 1.0 5817 5352 11157 HBL1_DMSO_200M_050219_1,11171 HBL1_DMSO_200M_050219_1,11171,PVPDKLGA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11172 57.973 142.0 562090.0 25 0 56357.0 + 45485 YTLREVDTV 9 112 548.2877321834666 1094.560911433733 2 548.2867309451103 MULTI CID FTMS 0 0 0 11157 368601.1875 0.3000371789310844 -2 0.2706527709960937 15 Unmodified _YTLREVDTV_ ENSG00000106268|ENST00000356714|NUDT1;nc|ENSG00000106268|P36639-1|NUDT1;nc|ENSG00000106268|P36639-2|NUDT1;nc|ENSG00000106268|P36639-3|NUDT1 100.0907132914201 0.0108732765679663 3 [YT]{I|L}REVDTV 9 0 + 80.485 0.0 0.0 7.3532 7.3532 94.948 0.0 0.0 0.0 13.480137174129323 39.84489533780624 13.480137174129323 22.95224226288019 0 1.5682503180159344 1.6989700043360187 1.41944517631652 0.3494850021680094 + + [YT]{I|L}REVDTV;[VS]E{[RE]|[WV]}{I|L}YTV;{[TV]|[{I|L}S]}D{[RE]|[WV]}{I|L}YTV;{NN|[MP]|[D{I|L}]|[EV]}S{[RE]|[WV]}{I|L}YTV;{[ES]|[DT]|[{I|L}C]}V{[RE]|[WV]}{I|L}YTV;[VS]E{[RE]|[WV]}{I|L}TYV;[{M(Oxidation (M))|F}V][R{I|L}]{M(Oxidation (M))|F}[PA]{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}[QT][NG]{I|L}YTV;[{M(Oxidation (M))|F}V][R{I|L}]{[DS]|[MA]|[CV]|TT}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}D{[RE]|[WV]}{I|L}TYV 7.3532;5.2562;4.9812;4.9016;4.2123;4.0551;4.0384;3.8649;3.8567;3.7801 +;-;-;-;-;-;-;-;-;- + 646 1 1.419 68096.1 1.0 5818 5352 11157 HBL1_DMSO_200M_050219_1,11172 HBL1_DMSO_200M_050219_1,11172,YTLREVDTV True True YTLREVDTV 57.973007 548.28673094511 14147494.0 11157.0 nc|ENSG00000106268|P36639-2|NUDT1;;nc|ENSG00000106268|P36639-1|NUDT1;;nc|ENSG00000106268|P36639-3|NUDT1;;ENSG00000106268|ENST00000356714|NUDT1 6.267541249593099 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11173 57.976 122.0 667760.0 25 0 31154.0 39364 VAGQGNPEPT 10 117 485.2373697943576 968.4601866555151 2 485.2371093630791 MULTI CID FTMS 0 0 0 11157 329518.53125 0.1675162480351627 1 -0.0907478332519531 16 Unmodified _VAGQGNPEPT_ ENSG00000168591|ENST00000538716|TMUB2;nc|ENSG00000168591|Q71RG4-2|TMUB2;nc|ENSG00000168591|Q71RG4-3|TMUB2;nc|ENSG00000168591|Q71RG4-4|TMUB2 18.1463463914782 0.5430639438673815 3 VA 2 8 26.287 0.0 0.0 2.7143 0.0 0.0 0.0 795.3313972144158 795.3313972144158 14.658044088628934 0.0 0.0 0.0 0 0.2614393726401688 1.2218487496163564 0.0 0.0 + VA 2.7143 + + 213 + 1 1.419 67477.7 1.0 5819 5352 11157 HBL1_DMSO_200M_050219_1,11173 HBL1_DMSO_200M_050219_1,11173,VAGQGNPEPT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11174 57.985 517.0 159650.0 25 0 10090.0 44516 YPDIFMREEV 10 155 649.8094916814352 1297.6044304296704 2 649.8096801638603 MULTI CID FTMS 0 0 0 11157 305676.03125 1.0 0 0.0 17 Unmodified _YPDIFMREEV_ ENSG00000115507|ENST00000282549|OTX1;ENSG00000165588|ENST00000672264|OTX2;nc|ENSG00000165588|P32243|OTX2 20.41453444215458 0.5050059513928961 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQ{[QC]|[C(Carbamidomethyl (C))A]}VEYV 11 7 + 53.144 0.0 0.0 4.0956 4.0956 73.702 0.0 0.0 0.0 9.622114391105995 11.879810541073446 9.622114391105995 2.6278813061184536 0 0.5629529932484498 1.6989700043360187 0.3252574989159953 0.2614393726401688 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQ{[QC]|[C(Carbamidomethyl (C))A]}VEYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQ{[QC]|[C(Carbamidomethyl (C))A]}YEVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QA]V{[QC]|[C(Carbamidomethyl (C))A]}VEYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QA]V[HN]E{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VS[C(Carbamidomethyl (C))M]SKEVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QA]V{[QC]|[C(Carbamidomethyl (C))A]}YEVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQ[HN]E{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQ[HN][HA]YV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQ{[QC]|[C(Carbamidomethyl (C))A]}MPYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQ{[QC]|[C(Carbamidomethyl (C))A]}VYEV 4.0956;3.893;3.7984;3.7983;3.6095;3.5958;3.5796;3.5775;3.5569;3.5077 -;-;-;-;-;-;-;-;-;- 1856 1 1.419 64465.0 1.0 5820 5352 11157 HBL1_DMSO_200M_050219_1,11174 HBL1_DMSO_200M_050219_1,11174,YPDIFMREEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11175 57.995 536.0 396740.0 25 0 23303.0 + 22203 LPQPKNLTV 9 198 505.3057752437823 0 505.3047668337822 PEAK CID FTMS 0 0 0 11157 292724.03125 0.2973891752420216 -6 0.6309127807617188 18 Unmodified _LPQPKNLTV_ ENSG00000143294|ENST00000271526|PRCC 103.35351024395868 0.0202588131840038 3 PQP 3 6 15.053 0.0 0.0 1.4925 0.0 0.0 113.08484658034033 570.3244722955686 683.409318875909 0.0 0.0 0.0 0.0 0 0.6109243748081782 0.0 0.0 0.7059771852360797 + PQP 1.4925 + + 1091 + 1 1.419 160508.9 1.0 5821 5352 11157 HBL1_DMSO_200M_050219_1,11175 HBL1_DMSO_200M_050219_1,11175,LPQPKNLTV True True LPQPKNLTV 57.995221 505.304766833782 10959745.0 11157.0 ENSG00000143294|ENST00000271526|PRCC 7.026699701944987 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11176 58.0 265.0 387790.0 25 0 45043.0 + 3794 DAIAVHVV 8 138 412.2369745087527 822.4593960843055 2 412.2368652224541 MULTI CID FTMS 0 0 0 11157 290276.875 1.0 0 0.0 19 Unmodified _DAIAVHVV_ ENSG00000160796|ENST00000450053|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 20.871210003555333 0.6025813472596342 3 {[DA]|[EG]}{I|L} 3 5 30.942 0.0 0.0 3.7621 0.0 0.0 0.0 520.2885641353398 520.2885641353398 0.9767302917421006 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[DA]|[EG]}{I|L} 3.7621 + + 118 1 1.419 84005.5 1.0 5822 5352 11157 HBL1_DMSO_200M_050219_1,11176 HBL1_DMSO_200M_050219_1,11176,DAIAVHVV False True DAIAVHVV 58.000125 412.236865222454 1376734.0 11157.0 nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;;ENSG00000160796|ENST00000450053|NBEAL2;;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 3.4885284900665283 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11177 58.013 749.0 238980.0 25 0 29377.0 45006 YPSSSQDSENI 11 193 409.51208753524384 1225.5144332059317 3 409.5122863650322 MULTI CID FTMS 0 0 0 11157 254958.625 0.9390815834057614 1 -0.0907478332519531 20 Unmodified _YPSSSQDSENI_ ENSG00000107738|ENST00000394957|VSIR 13.042465956692816 0.7638483625850725 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M{M(Oxidation (M))|F}{M(Oxidation (M))|F}YPYV 9 9 + 48.541 0.0 0.0 3.9609 3.9609 78.924 0.0 0.0 0.0 17.356370430932415 21.23835032203423 17.356370430932415 7.156818820794939 0 0.6435078169319297 2.0 0.3054621874040891 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M{M(Oxidation (M))|F}{M(Oxidation (M))|F}YPYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M{M(Oxidation (M))|F}{M(Oxidation (M))|F}YV{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[{M(Oxidation (M))|F}D]|MM}YPYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SY[YE]Y{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[{M(Oxidation (M))|F}D]|MM}YV{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[YE]YP[MT];{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}YPYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SYCC[KT]YV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}Y[YE]Y{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[YE]SY{[QN]|[E{I|L}]|[KN]} 3.9609;3.3769;3.0944;2.7495;2.5105;2.492;2.1942;2.1836;1.8908;1.7674 -;-;-;-;-;-;-;-;-;- 748 1 1.419 142399.4 1.0 5823 5352 11157 HBL1_DMSO_200M_050219_1,11177 HBL1_DMSO_200M_050219_1,11177,YPSSSQDSENI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11179 58.017 19.0 4261400.0 25 0 685740.0 + 4405 DAVRIVHI 8 91 461.7772639315938 921.5399749299876 2 461.7774230837822 MULTI CID FTMS 0 0 0 11178 2859346.5 0.5079720992072403 1 -0.07061767578125 1 Unmodified _DAVRIVHI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-5|BRCC3;nc|ENSG00000185515|P46736|BRCC3 36.506200033944 0.2927422953263032 3 {[DA]|[EG]}[RV]{I|L}VH{I|L} 8 0 + 55.947 0.0 0.0 6.0711 6.0711 89.28 0.0 0.0 0.0 11.249387366083 16.40978057358332 11.249387366083 11.249387366083 0 1.2302046884880935 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}[RV]{I|L}VH{I|L};{[QG]|[NA]}[KQ]{I|L}VH{I|L} 6.0711;4.8503 +;- + 62 1 1.421 65178.0 1.0 5824 5353 11178 HBL1_DMSO_200M_050219_1,11179 HBL1_DMSO_200M_050219_1,11179,DAVRIVHI False True DAVRIVHI 58.017469 461.777423083782 90529616.0 11178.0 nc|ENSG00000185515|P46736-3|BRCC3;;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;;ENSG00000185515|ENST00000330045|BRCC3;;nc|ENSG00000185515|P46736|BRCC3;;nc|ENSG00000185515|P46736-5|BRCC3 3.144843498865763 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11180 58.024 360.0 235190.0 25 0 20883.0 + 35751 SVIEQGGIQTV 11 127 565.8061539050117 1129.5977548768233 2 565.8062011599541 MULTI CID FTMS 0 0 0 11178 195727.65625 0.2191707945512343 3 -0.2069740295410156 2 Unmodified _SVIEQGGIQTV_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000562423.5_1_15:29046609-29050027:+|nuORF;ENST00000566321.5_1_15:29046634-29050027:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 43.77239144664712 0.1542841003880809 3 {[TV]|[{I|L}S]}QQVD[RV][VS] 10 7 + 37.571 0.0 0.0 3.326 3.326 71.613 0.0 0.0 0.0 2.505306013597803 2.7545373444029053 2.505306013597803 2.505306013597803 0 0.0 1.154901959985743 1.5356668758921828 0.3252574989159953 {[TV]|[{I|L}S]}QQVD[RV][VS];[VS]AAQVD[RV][VS];{[TV]|[{I|L}S]}QQVQ{[QN]|[E{I|L}]|[KN]}[VS];[VS]AAQVQ{[QN]|[E{I|L}]|[KN]}[VS];{[TV]|[{I|L}S]}Q[AG]VD[RV][VS];[AG]TVQVD[RV][VS];[VS]PSN[VS][RV][VS];[QT]VQVD[RV][VS];{[QN]|[E{I|L}]|[KN]}QN[VS][RV][VS];{[TV]|[{I|L}S]}[AG]QVD[RV][VS] 3.326;3.1043;2.9703;2.7485;2.5147;2.4897;2.4267;2.3194;2.267;2.2268 -;-;-;-;-;-;-;-;-;- 2405 1 1.421 70143.5 1.0 5825 5353 11178 HBL1_DMSO_200M_050219_1,11180 HBL1_DMSO_200M_050219_1,11180,SVIEQGGIQTV False True SVIEQGGIQTV 58.023969 565.806201159954 17740670.0 11178.0 ENST00000566321.5_1_15:29046634-29050027:+|nuORF;;ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;;ENST00000562423.5_1_15:29046609-29050027:+|nuORF 6.4937944412231445 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11181 58.025 36.0 1500100.0 25 0 140080.0 + 45046 YPYEYEGGHI 10 73 614.2694948301781 1226.5244367271562 2 614.2690917849541 MULTI CID FTMS 0 0 0 11178 1610470.25 0.240689205834994 -3 0.3614006042480469 3 Unmodified _YPYEYEGGHI_ ENSG00000101224|ENST00000245960|CDC25B;ENSG00000164045|ENST00000302506|CDC25A;nc|ENSG00000101224|P30305-2|CDC25B;nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B;nc|ENSG00000164045|P30304-2|CDC25A 92.8221339359638 0.0091313492244435 3 YPYEYEGG[H{I|L}] 10 0 + 99.589 0.0 0.0 8.1196 8.1196 87.255 0.0 0.0 0.0 72.35313081206435 4.884381005764311 4.884381005764311 3.521825181113627 0 1.1861818737241734 2.0 1.4361818737241734 0.0 + + YPYEYEGG[H{I|L}];YPYEYEN[H{I|L}];YPYE{[RE]|[WV]}E{[QN]|[E{I|L}]|[KN]};YPY{M(Oxidation (M))|F}HHGG[H{I|L}];YP{I|L}[WD]EY{[QN]|[E{I|L}]|[KN]};YP{I|L}[WD]YE{[QN]|[E{I|L}]|[KN]};YPY{M(Oxidation (M))|F}HHN[H{I|L}];YPY{M(Oxidation (M))|F}Y[QT][{M(Oxidation (M))|F}V];[YE]P{[RE]|[WV]}EY{[QN]|[E{I|L}]|[KN]};YPY[C(Carbamidomethyl (C))K][CS]G[H{I|L}] 8.1196;7.8324;6.3266;4.9659;4.8987;4.8801;4.6788;4.6496;4.557;4.1343 +;-;-;-;-;-;-;-;-;- + 594 + 1 1.421 45838.3 1.0 5826 5353 11178 HBL1_DMSO_200M_050219_1,11181 HBL1_DMSO_200M_050219_1,11181,YPYEYEGGHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11182 58.027 102.0 1442000.0 25 0 122830.0 + 39379 VAIEHLDKI 9 130 519.3031821107118 1036.5918112882234 2 519.3036376833916 MULTI CID FTMS 0 0 0 11178 598889.0 0.3660198506313332 -3 0.3614006042480469 4 Unmodified _VAIEHLDKI_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 71.70789743142352 0.0204387454931768 3 {I|L}G{I|L}EH{I|L}DK{I|L} 9 2 + 102.86 0.0 0.0 9.923 9.923 83.715 0.0 0.0 0.0 0.4845500650402812 10.122428338495835 0.4845500650402812 0.4845500650402812 0 2.293157681736544 2.0 1.0138793319624575 0.566901560044258 {I|L}G{I|L}EH{I|L}DK{I|L};VA{I|L}EH{I|L}DK{I|L};{I|L}G{I|L}EH{I|L}D{I|L}K;VA{I|L}EH{I|L}D{I|L}K;{I|L}{I|L}GEH{I|L}DK{I|L};{I|L}VAEH{I|L}DK{I|L};V{I|L}AEH{I|L}DK{I|L};{I|L}G{I|L}EH{I|L}[VG]S{I|L};VA{I|L}EH{I|L}[VG]S{I|L};{I|L}{I|L}GEH{I|L}D{I|L}K 9.923;9.8763;8.9465;8.8998;7.6774;7.6285;7.5818;7.4752;7.4284;6.7009 -;+;-;-;-;-;-;-;-;- + 3426 + 1 1.421 114359.8 1.0 5827 5353 11178 HBL1_DMSO_200M_050219_1,11182 HBL1_DMSO_200M_050219_1,11182,VAIEHLDKI True True VAIEHLDKI 58.02734 519.303637683392 25882132.0 11178.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 3.7031990687052407 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11183 58.029 84.0 1203300.0 25 0 202580.0 + 13345 HLEDILGKL 9 105 346.53811222855666 1036.59250728587 3 346.5374023318291 MULTI CID FTMS 0 0 0 11178 578438.5 0.2238248911228613 -2 0.2317314147949218 5 Unmodified _HLEDILGKL_ ENSG00000164828|ENST00000401592|SUN1;ENST00000413171.6_1_7:892397-912965:+|nuORF;ENST00000475971.5_1_7:893033-912965:+|nuORF;nc|ENSG00000164828|O94901-5|SUN1;nc|ENSG00000164828|O94901-6|SUN1;nc|ENSG00000164828|O94901-9|SUN1 36.04419817259434 0.0971720506436186 3 VA{I|L}E{I|L}HDK{I|L} 9 5 + 73.008 0.0 0.0 7.0431 7.0431 81.086 0.0 0.0 0.0 27.33649220417425 5.166297960033361 5.166297960033361 1.2937092834840769 0 0.2887254899964357 1.5228787452803376 0.7302046884880937 0.0 VA{I|L}E{I|L}HDK{I|L};VA{I|L}EH{I|L}DK{I|L};VA{I|L}{I|L}EHDK{I|L};VA{I|L}E{I|L}HD{I|L}K;VA{I|L}EH{I|L}D{I|L}K;VA{I|L}{I|L}EHD{I|L}K;V{I|L}AE{I|L}HDK{I|L};V{I|L}AEH{I|L}DK{I|L};VA{I|L}E{I|L}S{I|L}[RH];VA{I|L}E{I|L}S[RH]{I|L} 7.0431;6.9183;6.7021;6.5447;6.4199;6.2038;5.9956;5.8708;5.8644;5.8644 -;-;-;-;-;-;-;-;-;- 1702 + 1 1.421 87769.9 1.0 5828 5353 11178 HBL1_DMSO_200M_050219_1,11183 HBL1_DMSO_200M_050219_1,11183,HLEDILGKL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11184 58.034 155.0 1114500.0 25 0 346870.0 -1 0 50 1199.830063771299 0 1199.829882800579 PEAK CID FTMS 0 0 0 11178 553118.625 0.4405932554501516 -2 0.2317314147949218 6 3 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.39472 0.0 0.0 598.7937202166225 1591.748748284935 2190.5424685015573 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.39472 - 44 + 1 1.421 145374.5 1.0 5829 5353 11178 HBL1_DMSO_200M_050219_1,11184 HBL1_DMSO_200M_050219_1,11184, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11185 58.036 123.0 300620.0 25 0 46517.0 -1 0 80 500.7546662613455 1998.9895591789816 4 501.0053893923759 MULTI CID FTMS 0 0 0 11178 464907.5 0.7527311412692985 -1 0.0907478332519531 7 3 {M(Oxidation (M))|F} 1 -1 16.99 0.0 0.0 0.84991 0.0 0.0 1833.9101657237068 0.0 1833.9101657237068 0.0 -11.197887582883936 -11.197887582883936 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.84991 - 194 + 1 1.421 47180.6 1.0 5830 5353 11178 HBL1_DMSO_200M_050219_1,11185 HBL1_DMSO_200M_050219_1,11185, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11186 58.039 122.0 577730.0 25 0 64179.0 + 31240 RLTEEFQNV 9 86 568.2906387673037 1134.5667246014073 2 568.2907592654228 MULTI CID FTMS 0 0 0 11178 460987.34375 0.2860615143773903 -3 0.3614006042480469 8 Unmodified _RLTEEFQNV_ ENSG00000122687|ENST00000242257|MRM2;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;ENST00000486040.1_1_7:2274759-2277695:-|nuORF 33.4449034751529 0.1114409586740657 3 [AG]DV{[SA]|[TG]}K{M(Oxidation (M))|F}QNV 11 6 + 58.796 0.0 0.0 5.1823 5.1823 74.76 0.0 0.0 0.0 1.0836686550251642 8.882075620965594 1.0836686550251642 1.0836686550251642 0 1.1861818737241734 1.5228787452803376 0.9436726795685342 0.0 [AG]DV{[SA]|[TG]}K{M(Oxidation (M))|F}QNV;[R{I|L}]TEE{M(Oxidation (M))|F}QNV;[DV]Q{[SA]|[TG]}K{M(Oxidation (M))|F}QNV;[AG]DKKE{M(Oxidation (M))|F}QNV;[AG]NV{[WT]|[RM]}{M(Oxidation (M))|F}QNV;[KG][KG]EE{M(Oxidation (M))|F}QNV;[AG]DV{[SA]|[TG]}K{M(Oxidation (M))|F}[AG]NV;[AG]DV{[SA]|[TG]}K{M(Oxidation (M))|F}QGGV;{[QD]|[EN]|[WG]|[KD]|[RS]}V{[SA]|[TG]}K{M(Oxidation (M))|F}QNV;[R{I|L}]TEE{M(Oxidation (M))|F}[AG]NV 5.1823;5.0868;4.8141;4.5433;4.4079;4.404;4.3777;4.3777;4.3668;4.2752 -;+;-;-;-;-;-;-;-;- + 560 1 1.421 60201.1 1.0 5831 5353 11178 HBL1_DMSO_200M_050219_1,11186 HBL1_DMSO_200M_050219_1,11186,RLTEEFQNV True True RLTEEFQNV 58.038861 568.290759265423 21680110.0 11178.0 ENST00000486040.1_1_7:2274759-2277695:-|nuORF;;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;;ENSG00000122687|ENST00000242257|MRM2 6.386059602101644 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11187 58.042 130.0 564000.0 25 0 43384.0 + 43963 YHKYSLIKGNF 11 116 457.2465316588618 1368.7177655767855 3 457.2464172244072 MULTI CID FTMS 0 0 0 11178 368197.34375 0.898214208527257 -1 0.0907478332519531 9 Unmodified _YHKYSLIKGNF_ ENSG00000143546|ENST00000368733|S100A8 25.154963734998336 0.5015564154082124 3 YHKY{[TV]|[{I|L}S]}GR 8 4 29.486 0.0 0.0 2.1543 0.0 0.0 0.0 361.1598909967407 361.1598909967407 8.576315990684265 0.0 0.0 0.0 0 0.7742275032520141 1.3010299956639813 0.0 0.2614393726401688 YHKY{[TV]|[{I|L}S]}GR 2.1543 - 552 + 1 1.421 65604.7 1.0 5832 5353 11178 HBL1_DMSO_200M_050219_1,11187 HBL1_DMSO_200M_050219_1,11187,YHKYSLIKGNF False True YHKYSLIKGNF 58.041506 457.246417224407 3091551.25 11178.0 ENSG00000143546|ENST00000368733|S100A8 5.723464330037435 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11188 58.044 134.0 268270.0 25 0 18829.0 -1 0 65 667.3371504413749 1998.9896219243249 3 667.3368408083916 MULTI CID FTMS 0 0 0 11178 342813.0625 1.0 0 0.0 10 3 E{M(Oxidation (M))|F} 2 -1 27.831 0.0 0.0 1.3922 0.0 0.0 1704.8687245627996 0.0 1704.8687245627996 0.0 9.872118693881546 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.0 E{M(Oxidation (M))|F} 1.3922 - 27 + 1 1.421 36538.5 1.0 5833 5353 11178 HBL1_DMSO_200M_050219_1,11188 HBL1_DMSO_200M_050219_1,11188, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11189 58.047 128.0 360480.0 25 0 31029.0 + 26497 NTWTEVHEV 9 90 557.761280855862 1113.5080087785238 2 557.7618286013603 MULTI CID FTMS 0 0 0 11178 295073.5625 1.0 0 0.0 11 Unmodified _NTWTEVHEV_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1;IL4I1|p.K143N|1|0.4|ENSG00000104951|chr19:49894406-49894406|C/G|missense_variant;nc|ENSG00000104951|Q96RQ9-2|IL4I1 22.736283301280096 0.2418982879461534 3 {[QS]|[NT]}W 3 6 35.19 0.0 0.0 3.1602 0.0 0.0 0.0 709.3149099453308 709.3149099453308 22.25772496747986 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.0 0.0 + {[QS]|[NT]}W 3.1602 + + 161 + 1 1.421 41566.1 1.0 5834 5353 11178 HBL1_DMSO_200M_050219_1,11189 HBL1_DMSO_200M_050219_1,11189,NTWTEVHEV False True NTWTEVHEV 58.046867 557.76182860136 2132294.0 11178.0 IL4I1|p.K143N|1|0.4|ENSG00000104951|chr19:49894406-49894406|C/G|missense_variant;;nc|ENSG00000104951|Q96RQ9-2|IL4I1;;ENSG00000104951|ENST00000391826|IL4I1;;chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1 5.5246273676554365 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11190 58.05 133.0 250820.0 25 0 21525.0 + 45064 YPYGPVENKI 10 71 590.3059690348645 1178.5973851365288 2 590.3064453005791 MULTI CID FTMS 0 0 0 11178 237142.390625 1.0 0 0.0 12 Unmodified _YPYGPVENKI_ ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF 21.53697664764585 0.484802182336468 3 YPY 3 7 50.445 0.0 0.0 4.2801 0.0 0.0 0.0 752.3942241462544 752.3942241462544 36.95046257204389 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YPY 4.2801 + + 32 + 1 1.421 31211.1 1.0 5835 5353 11178 HBL1_DMSO_200M_050219_1,11190 HBL1_DMSO_200M_050219_1,11190,YPYGPVENKI False True YPYGPVENKI 58.04959 590.306445300579 2233564.25 11178.0 nc|ENSG00000171634|Q12830|BPTF;;ENSG00000171634|ENST00000306378|BPTF;;nc|ENSG00000171634|Q12830-4|BPTF 4.506220817565918 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11191 58.052 132.0 698050.0 25 0 238470.0 23837 LVGRVTRVLI 10 80 563.3770226564503 1124.7394923797006 2 563.3770019412041 MULTI CID FTMS 0 0 0 11178 213191.921875 0.8014345992651671 -1 0.0907478332519531 13 Unmodified _LVGRVTRVLI_ ENSG00000146809|ENST00000451215|ASB15 6.1918466704503565 0.6979955778746556 3 P 1 10 0.9691 0.0 0.0 0.086162 0.0 0.0 942.5968054673943 82.06697260074452 1024.663778068139 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.086162 - 10 + 1 1.421 77168.5 1.0 5836 5353 11178 HBL1_DMSO_200M_050219_1,11191 HBL1_DMSO_200M_050219_1,11191,LVGRVTRVLI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11192 58.055 134.0 250660.0 25 0 12510.0 + 7632 EIYRSFQNV 9 74 578.2929654473102 1154.5713779614202 2 578.2935668826103 MULTI CID FTMS 0 0 0 11178 211760.921875 0.6889263145095486 -1 0.0907478332519531 14 Unmodified _EIYRSFQNV_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 32.78568957990786 0.1150597335874693 3 {[QN]|[E{I|L}]|[KN]}Y 3 6 28.997 0.0 0.0 2.5115 0.0 0.0 0.0 746.3618868463499 746.3618868463499 6.293709283484077 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 + {[QN]|[E{I|L}]|[KN]}Y 2.5115 + + 52 + 1 1.421 32428.8 1.0 5837 5353 11178 HBL1_DMSO_200M_050219_1,11192 HBL1_DMSO_200M_050219_1,11192,EIYRSFQNV True True EIYRSFQNV 58.055021 578.29356688261 2085457.625 11178.0 chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;;nc|ENSG00000079263|Q13342-5|SP140;;nc|ENSG00000079263|Q13342-2|SP140;;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-6|SP140;;ENSG00000079263|ENST00000392045|SP140;;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-3|SP140 6.404264450073242 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11193 58.058 141.0 226360.0 25 0 18942.0 + 2086 APPPPSLAV 9 64 424.7477319543425 847.480910975485 2 424.7476074099541 MULTI CID FTMS 0 0 0 11178 201710.0625 0.7887925772338181 1 -0.07061767578125 15 Unmodified _APPPPSLAV_ REV__ENST00000512291.5_1_17:48613811-48618261:+|nuORF;REV__ENST00000512379.5_1_17:48610205-48619515:+|nuORF 8.593279151180031 0.6146971463335029 3 AV 2 -1 16.198 0.0 0.0 1.9113 0.0 0.0 659.3641792633741 0.0 659.3641792633741 0.0 -0.1857518086928706 -0.1857518086928706 0.0 0 0.0 0.0 0.0 0.0 AV 1.9113 + + 38 + 1 1.421 32174.5 1.0 5838 5353 11178 HBL1_DMSO_200M_050219_1,11193 HBL1_DMSO_200M_050219_1,11193,APPPPSLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11194 58.061 135.0 317160.0 25 0 40473.0 + -1 GASQCITYMD 10 79 581.2317317964914 1160.4489106597828 2 581.2317993044853 MULTI CID FTMS 0 0 0 11178 197494.765625 0.625756720330028 1 -0.07061767578125 16 Carbamidomethyl (C),Oxidation (M) _GASQC(Carbamidomethyl (C))ITYM(Oxidation (M))D_ REV__ENSG00000109111|ENST00000314616|SUPT6H;REV__ENST00000577939.1_1_17:27008175-27009006:+|nuORF;REV__nc|ENSG00000109111|Q7KZ85-3|SUPT6H 6.2057823575117 0.6979311171683138 3 {I|L} 1 -1 11.99 0.0 0.0 1.0332 0.0 0.0 1029.3537701341952 0.0 1029.3537701341952 0.0 1.4177314113517507 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0332 + + 80 + 1 1.421 37736.4 1.0 5839 5353 11178 HBL1_DMSO_200M_050219_1,11194 HBL1_DMSO_200M_050219_1,11194,GASQCITYMD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11195 58.063 136.0 417170.0 25 0 29560.0 + 22047 LPPPPPPHL 9 94 482.7845332676538 963.5545136021076 2 482.7848693728447 MULTI CID FTMS 0 0 0 11178 191064.96875 0.0753693766715045 13 -0.8595466613769531 17 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 36.46614268402704 0.0948557732959553 3 {I|L}PPPPPPH{I|L} 9 0 + 82.841 0.0 0.0 8.5974 8.5974 97.085 0.0 0.0 0.0 71.2472939463698 9.621892823592972 9.621892823592972 22.21848749616356 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPPPPPH{I|L};{I|L}PPP[YK]H{I|L};{I|L}PP[YK]PH{I|L};{I|L}P[YK]PPH{I|L};{I|L}P[RD][{I|L}T]H{I|L};{I|L}[YK]PPPH{I|L};{I|L}[YK][YK]H{I|L};[YK]RR[WR];{[HG]|PP}PRR[WR] 8.5974;6.2916;6.2916;6.2916;3.8504;3.7751;1.4763;0.077105;0.0076258 +;-;-;-;-;-;-;-;- + 140 + 1 1.421 46483.8 1.0 5840 5353 11178 HBL1_DMSO_200M_050219_1,11195 HBL1_DMSO_200M_050219_1,11195,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11196 58.066 145.0 721250.0 25 0 153710.0 -1 0 87 406.7550247545598 811.4954965759197 2 406.7544433474541 MULTI CID FTMS 0 0 0 11178 158193.625 0.1220693753540525 -8 0.8472061157226562 18 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV 7 -1 + 52.752 0.0 0.0 6.5006 6.5006 83.617 0.0 0.0 0.0 3.8464343345171415 3.8464343345171415 3.8464343345171415 3.8464343345171415 0 1.579689690656103 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV;P{M(Oxidation (M))|F}KPPKV;[KP]PK{M(Oxidation (M))|F}PV;{[HG]|PP}KK{M(Oxidation (M))|F}PV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PPKPV;[KP]{M(Oxidation (M))|F}PKPV;[Q{I|L}]R{[TV]|[{I|L}S]}PV 6.5006;6.0266;4.5594;4.4055;3.2029;3.2029;1.1194 -;-;-;-;-;-;- 229 1 1.421 87151.6 1.0 5841 5353 11178 HBL1_DMSO_200M_050219_1,11196 HBL1_DMSO_200M_050219_1,11196, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11197 58.07 137.0 327580.0 25 0 19960.0 + 26689 NYNNAVSSF 9 93 508.2281635333631 1014.4417741335262 2 508.2277099490166 MULTI CID FTMS 0 0 0 11178 150965.078125 0.5483866189048257 -1 0.0907478332519531 19 Unmodified _NYNNAVSSF_ chr3:108125142-108135144|34|18.29|0.53|5.1|+|2|TE_info:THE1C,THE1C_dup1863,ERVL-MaLR,LTR,donor,+,108124859,108125142|None,LINC01215|6 16.942295170755138 0.3780752226737986 3 S{M(Oxidation (M))|F} 2 7 23.104 0.0 0.0 2.2775 0.0 0.0 762.3304592915325 0.0 762.3304592915325 0.0 11.84472017591597 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 + S{M(Oxidation (M))|F} 2.2775 + + 93 + 1 1.421 43029.6 1.0 5842 5353 11178 HBL1_DMSO_200M_050219_1,11197 HBL1_DMSO_200M_050219_1,11197,NYNNAVSSF False True False False TE_chimeric_transcript PXD020620_cell_line HBL1_DMSO_200M_050219_1 11198 58.084 800.0 359340.0 25 0 22921.0 + 17021 KKGSGAAG 8 259 338.1938430701935 674.373133207187 2 338.1937744021416 MULTI CID FTMS 0 0 0 11178 151123.859375 0.0364968064600499 -8 0.8472061157226562 20 Unmodified _KKGSGAAG_ REV__ENSG00000125798|ENST00000419308|FOXA2;REV__nc|ENSG00000125798|Q9Y261|FOXA2 0.6014990680409731 0.820681427635312 3 V 1 -1 8.3277 0.0 0.0 1.2349 0.0 0.0 557.2936939755449 0.0 557.2936939755449 0.0 0.8261666573373674 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2349 - 34 + 1 1.421 228745.1 0.9900000095367432 5843 5353 11178 HBL1_DMSO_200M_050219_1,11198 HBL1_DMSO_200M_050219_1,11198,KKGSGAAG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11200 58.088 1.6 12677000.0 25 0 935000.0 4009 DALRSGLTV 9 45 466.26395573800335 930.5133585428068 2 466.2642700076103 MULTI CID FTMS 0 0 0 11199 16796278.0 0.0692556589628731 4 -0.3014030456542969 1 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 19.256988751693697 0.3154191944385105 3 TV 2 7 29.776 0.0 0.0 3.2 0.0 0.0 712.3866018062818 0.0 712.3866018062818 0.0 20.90234700862716 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 + TV 3.2 + + 10 + 1 1.421 21900.9 1.0 5844 5354 11199 HBL1_DMSO_200M_050219_1,11200 HBL1_DMSO_200M_050219_1,11200,DALRSGLTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11201 58.089 0.81 35548000.0 25 0 5805000.0 + 44631 YPFKPPKV 8 62 325.86048683472575 974.5596311043772 3 325.8603393435478 MULTI CID FTMS 0 0 0 11199 23355880.0 0.3028022341204849 -13 1.2951774597167969 2 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 12.531546534597751 0.7257836412119636 3 Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KP 5 3 18.724 0.0 0.0 1.9212 0.0 0.0 0.0 339.2019442193969 339.2019442193969 11.73393743112328 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KP 1.9212 + + 35 + 1 1.421 29349.1 1.0 5845 5354 11199 HBL1_DMSO_200M_050219_1,11201 HBL1_DMSO_200M_050219_1,11201,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11202 58.09 17.0 1627300.0 25 0 175360.0 + 19700 LGLTNQPEL 9 58 492.77147364149215 983.5283943497844 2 492.7718383669853 MULTI CID FTMS 0 0 0 11199 1077596.125 0.0409404967479998 4 -0.3014030456542969 3 Unmodified _LGLTNQPEL_ ENSG00000179626|ENST00000641569|OR6C4 50.855029805455786 0.0384952370514206 3 PE{I|L} 3 6 23.689 0.0 0.0 2.4086 0.0 0.0 626.3384105135591 0.0 626.3384105135591 0.0 4.279484616358353 0.0 0.0 0 0.5 0.0 0.805462187404089 0.0 + PE{I|L} 2.4086 + + 113 + 1 1.421 28584.7 1.0 5846 5354 11199 HBL1_DMSO_200M_050219_1,11202 HBL1_DMSO_200M_050219_1,11202,LGLTNQPEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11203 58.092 30.0 1391500.0 25 0 149930.0 + 4156 DAPHPPLKI 9 63 329.858669109994 0 329.8587524294853 PEAK CID FTMS 0 0 0 11199 862028.875 1.0 0 0.0 4 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 10.823927491677226 0.3028200641087142 3 K 1 8 6.9897 0.0 0.0 1.0627 0.0 0.0 222.4191071635442 304.1663912408813 526.5854984044255 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 1.0627 + + 6 + 1 1.421 40789.8 1.0 5847 5354 11199 HBL1_DMSO_200M_050219_1,11203 HBL1_DMSO_200M_050219_1,11203,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11204 58.093 21.0 204360.0 25 0 43899.0 -1 0 14 500.7546662613455 1998.9895591789816 4 500.7554504275322 MULTI CID FTMS 0 0 0 11199 734495.375 1.0 0 0.0 5 3 {M(Oxidation (M))|F} 1 -1 16.99 0.0 0.0 0.84991 0.0 0.0 1833.910409864332 0.0 1833.910409864332 0.0 16.989700043360187 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.84991 - 1 + 1 1.421 17126.6 1.0 5848 5354 11199 HBL1_DMSO_200M_050219_1,11204 HBL1_DMSO_200M_050219_1,11204, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11205 58.098 281.0 466120.0 25 0 37435.0 + 32390 RYSEYAEEF 9 104 597.25909589898 1192.50363886476 2 597.2587158083916 MULTI CID FTMS 0 0 0 11199 516581.8125 0.3295786694611022 -2 0.1613655090332031 6 Unmodified _RYSEYAEEF_ ENSG00000139505|ENST00000381801|MTMR6 53.832793166522166 0.0319663582346103 3 EE{M(Oxidation (M))|F}[RH]AEE 8 6 55.041 0.0 0.0 4.6155 0.0 0.0 0.0 162.05550637174534 162.05550637174534 34.6075006521491 0.0 0.0 0.0 0 0.8807196863200843 1.154901959985743 1.024227503252014 1.079689690656103 EE{M(Oxidation (M))|F}[RH]AEE 4.6155 - 353 1 1.421 99795.6 1.0 5849 5354 11199 HBL1_DMSO_200M_050219_1,11205 HBL1_DMSO_200M_050219_1,11205,RYSEYAEEF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11206 58.099 50.0 876020.0 25 0 79927.0 + 44905 YPPPEVRNI 9 82 542.7931421868918 1083.5717314405836 2 542.7903320193291 MULTI CID FTMS 0 0 0 11199 413931.125 0.0087118473351244 43 -3.4733123779296875 7 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 12.872603262515298 0.4882369880199512 3 YPPV 4 5 55.191 0.0 0.0 5.0934 0.0 0.0 0.0 624.3275342593101 624.3275342593101 34.55591267411002 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 YPPV 5.0934 - 191 + 1 1.421 43325.3 1.0 5850 5354 11199 HBL1_DMSO_200M_050219_1,11206 HBL1_DMSO_200M_050219_1,11206,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11207 58.107 431.0 147090.0 25 0 37647.0 -1 0 39 1138.173178597331 3411.4977063921924 3 1138.508959949017 MULTI CID FTMS 0 0 0 11199 363946.71875 1.0 0 0.0 8 3 {M(Oxidation (M))|F}Y 2 -1 9.464 0.0 0.0 0.27741 0.0 0.0 1472.5080346166048 1625.8388239718538 3098.3468585884584 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.27741 - 7 + 1 1.421 62131.0 1.0 5851 5354 11199 HBL1_DMSO_200M_050219_1,11207 HBL1_DMSO_200M_050219_1,11207, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11208 58.113 336.0 248580.0 25 0 18087.0 + -1 MCFDAFSLNCM 11 88 685.750320660136 1369.486088387072 2 686.2523681521416 MULTI CID FTMS 0 0 0 11199 341531.59375 0.0175588222040406 -9 0.9178237915039062 9 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))FDAFSLNCM(Oxidation (M))_ REV__ENSG00000138039|ENST00000294954|LHCGR;REV__nc|ENSG00000138039|P22888-2|LHCGR 2.9952420565917617 0.861016188266951 3 YMDASY 6 -1 32.405 0.0 0.0 2.3662 0.0 0.0 320.1533937591758 316.0438631647094 636.1972569238852 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 YMDASY 2.3662 - 86 + 1 1.421 68901.3 1.0 5852 5354 11199 HBL1_DMSO_200M_050219_1,11208 HBL1_DMSO_200M_050219_1,11208,MCFDAFSLNCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11209 58.114 37.0 593580.0 25 0 26373.0 31126 RLMNDMTAV 9 57 525.7572504084756 0 525.7570678591728 PEAK CID FTMS 0 0 0 11199 344741.9375 0.1829287835223343 2 -0.1363563537597656 10 Unmodified _RLMNDMTAV_ ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1 7.289230182591677 0.3433663536648894 3 D 1 8 6.9897 0.0 0.0 0.666 0.0 0.0 197.0691139987885 734.3821505182249 931.4512645170134 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.666 + + 6 + 1 1.421 25698.8 1.0 5853 5354 11199 HBL1_DMSO_200M_050219_1,11209 HBL1_DMSO_200M_050219_1,11209,RLMNDMTAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11210 58.115 42.0 434680.0 25 0 29936.0 + 45091 YPYPVSNSV 9 50 513.2500022217249 1024.4854515102495 2 513.2504150271416 MULTI CID FTMS 0 0 0 11199 289180.1875 1.0 0 0.0 11 Unmodified _YPYPVSNSV_ ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 8.593279151180031 0.6146971463335029 3 V 1 8 12.764 0.0 0.0 1.2459 0.0 0.0 907.4060351667912 0.0 907.4060351667912 0.0 8.784809756568528 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2459 + + 10 + 1 1.421 19904.5 1.0 5854 5354 11199 HBL1_DMSO_200M_050219_1,11210 HBL1_DMSO_200M_050219_1,11210,YPYPVSNSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11211 58.122 346.0 480640.0 25 0 32589.0 + 44814 YPNKYESVI 9 184 556.7847361597985 1111.554919386397 2 556.7848388552666 MULTI CID FTMS 0 0 0 11199 284486.75 0.1093811803125083 -4 0.4320182800292969 12 Unmodified _YPNKYESVI_ ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1 53.40400417844725 0.0329064971918313 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NKESYV{I|L} 9 2 + 75.141 0.0 0.0 6.76 6.76 81.4 0.0 0.0 0.0 9.393105370789598 12.983324797206286 9.393105370789598 1.9188552623891293 0 1.329689690656103 1.6989700043360187 0.6989700043360187 0.5010912013506126 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NKESYV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGKESYV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NKESVY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NKEYSV{I|L};[VS]MGKESYV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGKESVY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGKEYSV{I|L};[VS]MGKESVY{I|L};[VS]MGKEYSV{I|L};[NP]KYESYV{I|L} 6.76;6.5873;6.0163;5.9716;5.9149;5.8437;5.799;5.1713;5.1266;5.0783 -;-;-;-;-;-;-;-;-;- 4610 1 1.421 133614.2 1.0 5855 5354 11199 HBL1_DMSO_200M_050219_1,11211 HBL1_DMSO_200M_050219_1,11211,YPNKYESVI True True YPNKYESVI 58.121756 556.784838855267 42077756.0 11199.0 nc|ENSG00000100280|Q10567-2|AP1B1;;nc|ENSG00000100280|Q10567-3|AP1B1;;nc|ENSG00000100280|Q10567-4|AP1B1;;ENSG00000100280|ENST00000357586|AP1B1 5.630263010660808 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11212 58.128 348.0 415160.0 25 0 25322.0 -1 IHLAMMSNSL 10 147 574.7755338341212 1147.5365147350424 2 574.7748290896416 MULTI CID FTMS 0 0 0 11199 248362.65625 0.3858149454506865 -2 0.1613655090332031 13 2 Oxidation (M) _IHLAM(Oxidation (M))M(Oxidation (M))SNSL_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 18.1463463914782 0.5430639438673815 3 [H{I|L}]{I|L}GSS{I|L}H 8 -1 61.865 0.0 0.0 5.3911 0.0 0.0 0.0 300.06120890912365 300.06120890912365 15.400990676322904 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 1.2302046884880935 0.0 [H{I|L}]{I|L}GSS{I|L}H 5.3911 - 1121 1 1.421 115125.9 1.0 5856 5354 11199 HBL1_DMSO_200M_050219_1,11212 HBL1_DMSO_200M_050219_1,11212,IHLAMMSNSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11214 58.138 454.0 354560.0 25 0 24875.0 + 30614 RFHEMHVAL 9 172 380.5306974976321 1138.5702630930964 3 380.5297729372978 MULTI CID FTMS 0 0 0 11213 88592.3125 0.0809629047368437 3 -0.2571525573730469 1 Unmodified _RFHEMHVAL_ ENSG00000131653|ENST00000326181|TRAF7;nc|ENSG00000131653|Q6Q0C0-2|TRAF7 11.517880264261096 0.5249077435482886 3 VHME[HT]A{I|L} 8 5 32.652 0.0 0.0 2.8678 0.0 0.0 202.13158712909177 0.0 202.13158712909177 0.0 17.95880017344075 0.0 0.0 0 0.0 0.0 0.0 0.0 VHME[HT]A{I|L} 2.8678 - 209 + 1 1.421 130267.3 1.0 5857 5355 11213 HBL1_DMSO_200M_050219_1,11214 HBL1_DMSO_200M_050219_1,11214,RFHEMHVAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11215 58.139 23.0 4674800.0 25 0 607260.0 + 36561 TALKIMKV 8 109 301.86155732224904 902.5628425669472 3 301.8612243533134 MULTI CID FTMS 0 0 0 11213 1480339.5 0.1245208518704883 -2 0.1148681640625 2 Unmodified _TALKIMKV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 41.8396318013385 0.2035142800366642 3 TA{I|L}K{I|L}MKV 8 0 + 84.721 0.0 0.0 9.3867 9.3867 85.96 0.0 0.0 0.0 33.39948061694351 1.9188552623891293 1.9188552623891293 1.9188552623891293 0 0.3252574989159953 1.6989700043360187 0.0 0.7134679910804405 + + TA{I|L}K{I|L}MKV;TA{I|L}K{I|L}MVK;TA{I|L}KP{M(Oxidation (M))|F}KV;TA{I|L}KP{M(Oxidation (M))|F}VK 9.3867;9.1741;8.5246;8.312 +;-;-;- + 273 + 1 1.421 91678.8 1.0 5858 5355 11213 HBL1_DMSO_200M_050219_1,11215 HBL1_DMSO_200M_050219_1,11215,TALKIMKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11216 58.143 169.0 824900.0 25 0 116780.0 + 21204 LPDGRIIKV 9 128 337.55025021225714 1009.6289212369716 3 337.5501891970634 MULTI CID FTMS 0 0 0 11213 310335.15625 0.0031648943252071 -6 0.5355796813964844 3 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 43.9818466556824 0.0535980856389242 3 {I|L}PDV 4 5 36.375 0.0 0.0 3.6028 0.0 0.0 0.0 582.3736664159644 582.3736664159644 11.607733688702382 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {I|L}PDV 3.6028 - 256 + 1 1.421 125255.3 1.0 5859 5355 11213 HBL1_DMSO_200M_050219_1,11216 HBL1_DMSO_200M_050219_1,11216,LPDGRIIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11217 58.149 355.0 677460.0 25 0 47239.0 + 44135 YLDPAQQNL 9 209 531.2664411847014 1060.5183294362027 2 531.2662841677666 MULTI CID FTMS 0 0 0 11213 243142.65625 0.3385839775245303 -2 0.1148681640625 4 Unmodified _YLDPAQQNL_ ENST00000421406.1_1_1:247353282-247372753:-|nuORF 49.93300154707207 0.0405168250806675 3 [Y{I|L}]DPAQQ 7 2 42.624 0.0 0.0 4.0192 0.0 0.0 0.0 242.11285245061143 242.11285245061143 11.646419320093951 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + [Y{I|L}]DPAQQ 4.0192 + + 3944 1 1.421 184896.7 1.0 5860 5355 11213 HBL1_DMSO_200M_050219_1,11217 HBL1_DMSO_200M_050219_1,11217,YLDPAQQNL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11218 58.156 407.0 299940.0 25 0 36018.0 -1 0 109 845.7128978632184 2534.116864189855 3 845.7138549685478 MULTI CID FTMS 0 0 0 11213 222527.0 0.8475661140380863 -1 0.04425048828125 5 3 DEDVYYES[PS]PVR 13 -1 45.72 0.0 0.0 1.8042 0.0 0.0 408.115516896017 586.2761934869749 994.391710382992 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 DEDVYYES[PS]PVR 1.8042 - 1519 + 1 1.421 86489.0 1.0 5861 5355 11213 HBL1_DMSO_200M_050219_1,11218 HBL1_DMSO_200M_050219_1,11218, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11219 58.163 384.0 488880.0 25 0 28244.0 + 34762 SQANVVVKI 9 181 479.29010271664856 956.5656525000971 2 479.2903625369072 MULTI CID FTMS 0 0 0 11213 218330.265625 0.225205145322216 6 -0.3394279479980469 6 Unmodified _SQANVVVKI_ ENSG00000100219|ENST00000344347|XBP1 47.594388314883695 0.0456443387682827 3 {[QS]|[NT]}ANVVVK{I|L} 9 0 {[QS]|[NT]} + + 40.308 14.973 6.9612 4.2139 4.2139 53.14 0.0 0.0 0.0 0.0 24.87785108139413 0.0 0.0 0 1.3901668265424345 0.0 0.0 0.2742275032520141 + + {[QS]|[NT]}ANVVVK{I|L} 4.2139 + + 705 + 1 1.421 144117.2 1.0 5862 5355 11213 HBL1_DMSO_200M_050219_1,11219 HBL1_DMSO_200M_050219_1,11219,SQANVVVKI True True SQANVVVKI 58.163206 479.290362536907 2322934.0 11213.0 ENSG00000100219|ENST00000344347|XBP1 5.021769046783447 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11220 58.17 374.0 837170.0 25 0 131900.0 + 34365 SLTGRLDEV 9 201 495.26685458341984 988.5191562336396 2 495.2670165896416 MULTI CID FTMS 0 0 0 11213 217370.46875 0.0384115681444259 -3 0.2056159973144531 7 Unmodified _SLTGRLDEV_ ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6 72.96794272382148 0.0199516581995792 3 {[TV]|[{I|L}S]}A[RD]EVTV 9 5 + 59.189 0.0 0.0 5.9876 5.9876 79.751 0.0 0.0 0.0 11.034284825601482 14.09256854528806 11.034284825601482 2.467940394481687 0 1.055462187404089 2.0 1.0010912013506126 0.2302046884880938 {[TV]|[{I|L}S]}A[RD]EVTV;{[TV]|[{I|L}S]}A[RD]TVEV;{[TV]|[{I|L}S]}[WK]EVEV;{NN|[MP]|[D{I|L}]|[EV]}[WK]EVTV;{[TV]|[{I|L}S]}T{[WT]|[RM]}VSPV;{NN|[MP]|[D{I|L}]|[EV]}[WK]TVEV;{[TV]|[{I|L}S]}TVNQQTV;{[TV]|[{I|L}S]}A[WE][{I|L}A]TV;{[TV]|[{I|L}S]}[WK]W[NG]V;[{I|L}T]G[RD]EVTV 5.9876;5.738;4.9298;4.8714;4.815;4.6217;4.4006;3.898;3.271;3.1292 -;-;-;-;-;-;-;-;-;- 3049 1 1.421 235181.0 1.0 5863 5355 11213 HBL1_DMSO_200M_050219_1,11220 HBL1_DMSO_200M_050219_1,11220,SLTGRLDEV True True SLTGRLDEV 58.169922 495.267016589642 32223144.0 11213.0 nc|ENSG00000166888|P42226-3|STAT6;;nc|ENSG00000166888|P42226-2|STAT6;;ENSG00000166888|ENST00000300134|STAT6 0.4901251991589864 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11221 58.177 421.0 142380.0 25 0 17990.0 -1 0 58 906.1132467576346 3620.423881164138 4 906.614794909954 MULTI CID FTMS 0 0 0 11213 202514.046875 1.0 0 0.0 8 3 G 1 -1 5.4846 0.0 0.0 0.15149 0.0 0.0 2914.016850990113 646.3559664361936 3560.372817426307 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.15149 - 22 + 1 1.421 53695.4 1.0 5864 5355 11213 HBL1_DMSO_200M_050219_1,11221 HBL1_DMSO_200M_050219_1,11221, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11222 58.184 375.0 378940.0 25 0 82799.0 + 32113 RVMEEIRNL 9 133 580.316088839937 1158.617624746674 2 580.3170043826103 MULTI CID FTMS 0 0 0 11213 172052.46875 0.7366682337055 1 -0.0921058654785156 9 Unmodified _RVMEEIRNL_ ENSG00000066136|ENST00000447388|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 33.4449034751529 0.1114409586740657 3 [VG]A[C(Carbamidomethyl (C))K]E{I|L}RN{I|L} 10 4 + 54.649 0.0 0.0 4.7167 4.7167 74.052 0.0 0.0 0.0 40.03952976537809 11.567270949552082 11.567270949552082 1.650129845764127 0 1.6822333069283657 1.6989700043360187 0.5 0.3494850021680094 [VG]A[C(Carbamidomethyl (C))K]E{I|L}RN{I|L};{I|L}N[C(Carbamidomethyl (C))K]E{I|L}RN{I|L} 4.7167;4.5743 -;- 205 + 1 1.421 109373.2 1.0 5865 5355 11213 HBL1_DMSO_200M_050219_1,11222 HBL1_DMSO_200M_050219_1,11222,RVMEEIRNL True True RVMEEIRNL 58.184204 580.31700438261 2871370.75 11213.0 ENSG00000066136|ENST00000447388|NFYC;;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC;;NFYC|p.R39Q|1|0.44|ENSG00000066136|chr1:40747544-40747544|G/A|missense_variant;;nc|ENSG00000066136|Q13952-5|NFYC;;ENST00000424419.6_1_1:41157373-41232429:+|nuORF 4.864997386932373 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11223 58.192 415.0 361510.0 25 0 19244.0 + + 11856 LPYPASSRL 9 175 502.75852397095696 1003.502495008714 2 502.7576476931572 MULTI CID FTMS 0 0 0 11213 130728.7578125 1.0 0 0.0 10 Unmodified _GLSLEQMQV_ nc|ENSG00000104221|Q9HAW0-2|BRF2;ENSG00000104221|ENST00000220659|BRF2 20.453626601364224 0.2830276176381075 3 NPY{I|L}A{[NV]|[RG]}{M(Oxidation (M))|F} 8 -1 31.72 0.0 0.0 3.1609 0.0 0.0 0.0 82.06695734195546 82.06695734195546 7.524881739720328 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 NPY{I|L}A{[NV]|[RG]}{M(Oxidation (M))|F} 3.1609 - 1966 + 1 1.421 115531.5 1.0 5866 5355 11213 HBL1_DMSO_200M_050219_1,11223 HBL1_DMSO_200M_050219_1,11223,GLSLEQMQV False False LPYPASSRL 58.191599 502.757647693157 3446746.0 11213.0 nc|ENSG00000104221|Q9HAW0-2|BRF2;;ENSG00000104221|ENST00000220659|BRF2 4.279414415359497 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11224 58.202 528.0 774360.0 25 0 39915.0 281 ADLFRLVPF 9 314 359.87319380727536 1076.597752022026 3 360.2075683474541 MULTI CID FTMS 0 0 0 11213 128158.25 0.0898831033799552 -2 0.1148681640625 11 Unmodified _ADLFRLVPF_ ENSG00000168924|ENST00000302787|LETM1;ENST00000466175.5_1_4:1836565-1857677:-|nuORF;ENST00000505551.5_1_4:1836565-1844755:-|nuORF;ENST00000512669.1_1_4:1836565-1841051:-|nuORF;ENST00000597330.1_1_19:58556424-58557021:+|nuORF;nc|ENSG00000168924|O95202-2|LETM1;nc|ENSG00000168924|O95202-3|LETM1 26.88365393820708 0.1891292719743517 3 {[DA]|[EG]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAKT{I|L} 10 6 + 56.902 0.0 0.0 5.2853 5.2853 74.738 0.0 0.0 0.0 0.8504474806420674 0.8504474806420674 0.8504474806420674 0.8504474806420674 0 1.0356668758921828 2.0 0.8252574989159953 0.816901560044258 {[DA]|[EG]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAKT{I|L};[R{M(Oxidation (M))|F}]N{I|L}KTAD{I|L};[{M(Oxidation (M))|F}V]ATK{I|L}{[QG]|[NA]}T{I|L};[{M(Oxidation (M))|F}V]ATRAAKT{I|L};[R{M(Oxidation (M))|F}]N{I|L}KATD{I|L};[{M(Oxidation (M))|F}V]TAK{I|L}{[QG]|[NA]}T{I|L};[R{M(Oxidation (M))|F}]GG{I|L}KTAD{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}[K{I|L}]AAKT{I|L};[{M(Oxidation (M))|F}V]TARAAKT{I|L};{[DA]|[EG]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAK{I|L}T 5.2853;5.2063;5.0435;4.8064;4.5405;4.3778;4.351;4.2653;4.1407;4.0238 -;-;-;-;-;-;-;-;-;- 2413 + 1 1.421 322106.8 1.0 5867 5355 11213 HBL1_DMSO_200M_050219_1,11224 HBL1_DMSO_200M_050219_1,11224,ADLFRLVPF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11225 58.206 220.0 193270.0 25 0 26547.0 + + 44308 YLMEGSYNKV 10 75 602.2905471924272 1202.5665414516543 2 602.2919189333916 MULTI CID FTMS 0 0 0 11213 104784.2109375 0.6070694617747147 -1 0.04425048828125 12 Unmodified _YLMEHTEIAP_ ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF 14.838274106304384 0.5985701837916485 3 [Y{I|L}]ME 4 -1 37.435 0.0 0.0 3.1129 0.0 0.0 0.0 663.3112276666624 663.3112276666624 21.449018044899617 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [Y{I|L}]ME 3.1129 + + 67 + 1 1.421 35289.7 1.0 5868 5355 11213 HBL1_DMSO_200M_050219_1,11225 HBL1_DMSO_200M_050219_1,11225,YLMEHTEIAP False False YLMEGSYNKV 58.206224 602.291918933392 1979613.875 11213.0 ENSG00000099341|ENST00000215071|PSMD8;;ENST00000592001.5_1_19:38865430-38871817:+|nuORF 5.324015299479167 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11226 58.22 800.0 70417.0 25 0 27731.0 -1 0 32 1099.788139889955 3296.342590270064 3 1100.460009753704 MULTI CID FTMS 0 0 0 11213 96560.796875 0.4404205277784825 5 -0.3340797424316406 13 3 T 1 -1 5.4846 0.0 0.0 0.16638 0.0 0.0 2498.9470957405706 693.3267305963499 3192.2738263369206 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.16638 - 2 + 1 1.421 50352.7 0.75 5869 5355 11213 HBL1_DMSO_200M_050219_1,11226 HBL1_DMSO_200M_050219_1,11226, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11228 58.224 5.2 39394000.0 25 0 4258000.0 + 44645 YPFKPPKV 8 97 488.2869567505858 974.5593605679716 2 488.2868530154228 MULTI CID FTMS 0 0 0 11227 14805938.0 0.4363116160866049 -9 0.8852272033691406 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 74.42276476219924 0.1056688965812189 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 82.177 0.0 0.0 8.4322 8.4322 96.924 0.0 0.0 0.0 18.69305133344093 10.396154426879905 10.396154426879905 22.44341577071616 0 1.960409376976188 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}KPPKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KYPPKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPYV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YKPPKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPYPKV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PYPPKV;[KP]{M(Oxidation (M))|F}YPPKV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PPKPYV 8.4322;6.1293;5.6745;5.6674;5.5798;5.2564;4.6674;3.7505;3.7505;3.7433 +;+;-;-;-;-;-;-;-;- + 700 + 1 1.428 162574.6 1.0 5870 5356 11227 HBL1_DMSO_200M_050219_1,11228 HBL1_DMSO_200M_050219_1,11228,YPFKPPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11229 58.226 37.0 4542400.0 25 0 406770.0 + 23801 LVDRLKRIL 9 104 375.9201947044989 1124.7387547136966 3 375.9201232790947 MULTI CID FTMS 0 0 0 11227 1792330.0 0.6071413539655638 2 -0.1650466918945312 2 Unmodified _LVDRLKRIL_ REV__ENSG00000126602|ENST00000246957|TRAP1;REV__nc|ENSG00000126602|Q12931-2|TRAP1 18.373094154950223 0.3393451798331396 3 {I|L}WV{I|L}{I|L} 5 -1 35.918 0.0 0.0 3.1934 0.0 0.0 482.3331471173844 0.0 482.3331471173844 0.0 19.490925311194182 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L}WV{I|L}{I|L} 3.1934 - 59 1 1.428 140218.4 1.0 5871 5356 11227 HBL1_DMSO_200M_050219_1,11229 HBL1_DMSO_200M_050219_1,11229,LVDRLKRIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11230 58.227 20.0 4102000.0 25 0 451680.0 + 36565 TALKIMKV 8 89 452.2882719317104 902.5619909302208 2 452.2885009646416 MULTI CID FTMS 0 0 0 11227 3677325.75 0.6312025996308899 -1 0.0921058654785156 3 Unmodified _TALKIMKV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 51.41523569358685 0.1325905806600148 3 TA{I|L}K{I|L}MKV 8 0 + 86.311 0.0 0.0 9.5629 9.5629 87.794 0.0 0.0 0.0 30.06070097942825 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 1.9916440611282624 1.6989700043360187 0.0 0.0 + + TA{I|L}K{I|L}MKV;TA{I|L}K{I|L}MVK;V[VS]K{I|L}MKV;V[VS]K{I|L}MVK 9.5629;9.2294;5.8482;5.5147 +;-;-;- + 257 + 1 1.428 71414.7 1.0 5872 5356 11227 HBL1_DMSO_200M_050219_1,11230 HBL1_DMSO_200M_050219_1,11230,TALKIMKV False True TALKIMKV 58.226803 452.288500964642 314662644.0 11227.0 nc|ENSG00000108788|Q9UH92|MLX;;ENST00000585403.5_1_17:40721544-40721625:+|nuORF;;nc|ENSG00000108788|Q9UH92-2|MLX;;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;;ENSG00000108788|ENST00000435881|MLX 6.029812812805176 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11231 58.228 21.0 5717200.0 25 0 540400.0 + 21208 LPDGRIIKV 9 95 505.8216907176456 1009.6288285020912 2 505.8221618533134 MULTI CID FTMS 0 0 0 11227 3289751.75 0.1067251782136776 -5 0.4387054443359375 4 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 57.10758569107544 0.0276834916274374 3 [{I|L}P]D{[NV]|[RG]}{I|L}K{I|L}V 9 2 + 53.685 0.0 0.0 5.3173 5.3173 75.188 0.0 0.0 0.0 2.8827109445831525 28.251349721325955 2.8827109445831525 1.020599913279625 0 1.2134679910804405 2.0 0.0 0.0 [{I|L}P]D{[NV]|[RG]}{I|L}K{I|L}V;[{I|L}P]D{[NV]|[RG]}{I|L}{I|L}KV;[DP]{I|L}{[NV]|[RG]}{I|L}K{I|L}V;[DP]{I|L}{[NV]|[RG]}{I|L}{I|L}KV;[{I|L}P]KS[TP]R{I|L}V;[{I|L}P]KS[TP]{I|L}RV;[DP]{[NV]|[RG]}{I|L}{I|L}K{I|L}V;[DP]{[NV]|[RG]}{I|L}{I|L}{I|L}KV;[K{I|L}]PS[TP]R{I|L}V;[PS][K{I|L}][TP]R{I|L}V 5.3173;5.2162;3.8277;3.7266;3.5581;3.0856;2.968;2.8669;0.63861;0.46726 -;+;-;-;-;-;-;-;-;- + 447 1 1.428 97894.0 1.0 5873 5356 11227 HBL1_DMSO_200M_050219_1,11231 HBL1_DMSO_200M_050219_1,11231,LPDGRIIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11232 58.229 22.0 4753000.0 25 0 360760.0 -1 MFPLIGKTI 9 93 539.3060581295514 1076.597563325903 2 539.3063842654228 MULTI CID FTMS 0 0 0 11227 3292311.25 0.5577661122540489 -1 0.0921058654785156 5 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))FPLIGKTI_ ENSG00000095777|ENST00000642920|MYO3A;nc|ENSG00000095777|Q8NEV4-2|MYO3A 32.30548876998284 0.1201446275138228 3 {[DA]|[EG]}[R{M(Oxidation (M))|F}]N{I|L}KT{I|L} 9 -1 + 63.465 0.0 0.0 5.8949 5.8949 79.244 0.0 0.0 0.0 2.2834748590793907 16.478174818886373 2.2834748590793907 2.2834748590793907 0 1.555462187404089 1.6989700043360187 0.3807196863200844 0.0 {[DA]|[EG]}[R{M(Oxidation (M))|F}]N{I|L}KT{I|L};[{I|L}T]K{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DKT{I|L};{[DA]|[EG]}[R{M(Oxidation (M))|F}]GG{I|L}KT{I|L};[{I|L}T]K{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SRT{I|L};[{I|L}T]K[KC]DRT{I|L};[{I|L}T]K{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KDT{I|L};[{I|L}T]K[KC]RDT{I|L};[{I|L}T]K{M(Oxidation (M))|F}[QA]RT{I|L};[{I|L}T]K{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S[VG]T{I|L};[{I|L}T]K[KC]D[VG]T{I|L} 5.8949;5.6828;5.0396;5.0087;4.8451;4.7291;4.5655;4.4495;4.1534;3.9898 -;-;-;-;-;-;-;-;-;- 552 1 1.428 85427.5 1.0 5874 5356 11227 HBL1_DMSO_200M_050219_1,11232 HBL1_DMSO_200M_050219_1,11232,MFPLIGKTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11233 58.23 30.0 1966100.0 25 0 126860.0 + 4619 DAYTVQQL 8 87 469.235375756225 936.45619857925 2 469.2351867556572 MULTI CID FTMS 0 0 0 11227 1728042.0 0.4168711971680466 -1 0.0921058654785156 6 Unmodified _DAYTVQQL_ ENSG00000055130|ENST00000325222|CUL1 32.116972079565 0.368454113111938 3 {[DA]|[EG]}YT 4 4 28.901 0.0 0.0 3.0862 0.0 0.0 0.0 483.2575956341908 483.2575956341908 7.614393726401687 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5 0.0 + {[DA]|[EG]}YT 3.0862 + + 159 1 1.428 51434.2 1.0 5875 5356 11227 HBL1_DMSO_200M_050219_1,11233 HBL1_DMSO_200M_050219_1,11233,DAYTVQQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11234 58.232 43.0 2398000.0 25 0 286680.0 + 12229 GQVPPLQSV 9 116 462.76121324174 923.50787355028 2 462.7613708376884 MULTI CID FTMS 0 0 0 11227 1463131.0 0.8890734123249604 -1 0.0921058654785156 7 Unmodified _GQVPPLQSV_ ENSG00000106351|ENST00000300176|AGFG2 69.10491478415734 0.0214449631113747 3 {[QG]|[NA]}VPPASV{[VA]|[{I|L}G]} 10 4 + 50.387 0.0 0.0 5.456 5.456 79.909 0.0 0.0 0.0 3.562109653078388 4.884381005764311 3.562109653078388 3.562109653078388 0 1.3494850021680094 0.5086383061657274 0.8494850021680094 0.6989700043360187 {[QG]|[NA]}VPPASV{[VA]|[{I|L}G]};[AG]GVPPASV{[VA]|[{I|L}G]};[{I|L}P]PQSNV{[VA]|[{I|L}G]};[{I|L}P]QPSNV{[VA]|[{I|L}G]};[AG]{I|L}PPSNV{[VA]|[{I|L}G]};[{I|L}P]PQSVN{[VA]|[{I|L}G]};{[QG]|[NA]}PVPASV{[VA]|[{I|L}G]};[{I|L}P]QPSVN{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}NPPASV{[VA]|[{I|L}G]};[{I|L}P]PQNSV{[VA]|[{I|L}G]} 5.456;5.0703;4.4108;4.2201;4.1257;4.0863;3.9367;3.8956;3.843;3.8416 -;-;-;-;-;-;-;-;-;- 1417 1 1.428 83480.4 1.0 5876 5356 11227 HBL1_DMSO_200M_050219_1,11234 HBL1_DMSO_200M_050219_1,11234,GQVPPLQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11235 58.233 68.0 1848200.0 25 0 403000.0 + 10020 FPLSCIYFL 9 119 368.194404519104 1101.5613841575118 3 368.1941406130791 MULTI CID FTMS 0 0 0 11227 1010697.9375 0.0572367606237919 45 -3.746196746826172 8 Unmodified _FPLSCIYFL_ REV__ENSG00000119714|ENST00000650645|GPR68 30.22481116460888 0.1466181017706357 3 [PG]K{[{M(Oxidation (M))|F}H]|[RQ]}QE{I|L}{M(Oxidation (M))|F} 9 -1 + 41.623 0.0 0.0 3.7786 3.7786 75.951 0.0 0.0 0.0 2.066002407687911 21.26811418314854 2.066002407687911 4.771212547196619 0 0.0 0.5086383061657274 0.2887254899964357 0.9247425010840048 [PG]K{[{M(Oxidation (M))|F}H]|[RQ]}QE{I|L}{M(Oxidation (M))|F};[PG]K{[{M(Oxidation (M))|F}H]|[RQ]}EQ{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WK]{M(Oxidation (M))|F}Q{I|L}{M(Oxidation (M))|F};[PG]K{[{M(Oxidation (M))|F}H]|[RQ]}[AG]E{I|L}{M(Oxidation (M))|F};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}PYQ[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[PG]K{[{M(Oxidation (M))|F}H]|[RQ]}E[AG]{I|L}{M(Oxidation (M))|F};[PG]K[RD]AAQ{I|L}{M(Oxidation (M))|F};[PG]K{[{M(Oxidation (M))|F}H]|[RQ]}Q{M(Oxidation (M))|F}{I|L}E;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WK]{M(Oxidation (M))|F}[AG]{I|L}{M(Oxidation (M))|F} 3.7786;3.3455;2.962;2.9427;2.7607;2.5963;2.5095;2.422;2.1512;2.1212 -;-;-;-;-;-;-;-;-;- 642 1 1.428 107440.3 1.0 5877 5356 11227 HBL1_DMSO_200M_050219_1,11235 HBL1_DMSO_200M_050219_1,11235,FPLSCIYFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11236 58.235 100.0 2052900.0 25 0 357340.0 + 5078 DGYFGGARV 9 136 471.2272629417913 940.4399729503826 2 471.2276489138603 MULTI CID FTMS 0 0 0 11227 974960.875 0.2795968954322286 2 -0.1650466918945312 9 Unmodified _DGYFGGARV_ ENSG00000044446|ENST00000379942|PHKA2;ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1 25.399314129420983 0.2080152500878129 3 CSV 3 8 22.861 0.0 0.0 2.4309 0.0 0.0 633.3235921904202 0.0 633.3235921904202 0.0 0.1274290102549002 0.0 0.0 0 0.0 0.0 0.75 0.0 CSV 2.4309 - 541 + 1 1.428 163106.0 1.0 5878 5356 11227 HBL1_DMSO_200M_050219_1,11236 HBL1_DMSO_200M_050219_1,11236,DGYFGGARV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11237 58.238 159.0 926580.0 25 0 59289.0 + 34927 SQIREMETL 9 136 553.7789197770259 1105.5432866208516 2 553.7792236208916 MULTI CID FTMS 0 0 0 11227 604119.3125 0.4183544552528778 -2 0.1363563537597656 10 Unmodified _SQIREMETL_ ENSG00000157456|ENST00000288207|CCNB2 69.33821966488729 0.021354776001734 3 {[QS]|[NT]}{I|L}REMET{I|L} 9 0 + 80.904 0.0 0.0 7.318 7.318 86.714 0.0 0.0 0.0 4.5581820015727885 16.478174818886373 4.5581820015727885 4.5581820015727885 0 1.7302046884880935 0.6777807052660807 0.8283409326844267 0.5387254899964358 + + {[QS]|[NT]}{I|L}REMET{I|L};[{I|L}T]NREMET{I|L};{[QS]|[NT]}{I|L}REMTE{I|L};[{I|L}T]E[RN]MET{I|L};[{I|L}T]GGREMET{I|L};[{I|L}T]NREMTE{I|L};{[QS]|[NT]}{[RE]|[WV]}{I|L}MET{I|L};{[QS]|[NT]}{I|L}RETME{I|L};{[QS]|[NT]}{I|L}RTMEE{I|L};[{I|L}T]E[RN]MTE{I|L} 7.318;6.9057;6.2992;6.1344;6.0728;5.8869;5.6048;5.2983;5.2948;5.1157 +;-;-;-;-;-;-;-;-;- + 4357 1 1.428 117040.7 1.0 5879 5356 11227 HBL1_DMSO_200M_050219_1,11237 HBL1_DMSO_200M_050219_1,11237,SQIREMETL True True SQIREMETL 58.238439 553.779223620892 8033604.0 11227.0 ENSG00000157456|ENST00000288207|CCNB2 5.351298967997233 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11238 58.242 180.0 850390.0 25 0 114070.0 + 18399 KVVDVVRNL 9 130 521.3244757684231 1040.634398603646 2 521.3244506716728 MULTI CID FTMS 0 0 0 11227 572475.75 0.12208336354447 -2 0.1363563537597656 11 Unmodified _KVVDVVRNL_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 65.47368725323818 0.0230515101691092 3 KVVDVV[RN]{I|L} 9 0 + 85.715 0.0 0.0 8.2368 8.2368 96.325 0.0 0.0 0.0 52.66765926813832 6.091620411427357 6.091620411427357 19.50318762307696 0 2.416386562212267 1.2218487496163564 0.0 0.25 + + KVVDVV[RN]{I|L};KV{I|L}{[CP]|[EA]}V[RN]{I|L};K{I|L}V{[CP]|[EA]}V[RN]{I|L};K{I|L}{[CP]|[EA]}VV[RN]{I|L};KV{[CA]|SS}VV[RV][PA];{I|L}KV{[CP]|[EA]}V[RN]{I|L};{I|L}K{[CP]|[EA]}VV[RN]{I|L} 8.2368;6.3626;4.4911;4.4868;3.8475;3.7213;3.7171 +;-;-;-;-;-;- + 455 + 1 1.428 120775.1 1.0 5880 5356 11227 HBL1_DMSO_200M_050219_1,11238 HBL1_DMSO_200M_050219_1,11238,KVVDVVRNL True True KVVDVVRNL 58.241941 521.3251 57774547.0 11227.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1 5.867365678151448 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11239 58.246 193.0 375750.0 25 0 27295.0 + 26466 NTIESLKDV 9 119 509.7748458105594 1017.5351386879188 2 509.7747985720634 MULTI CID FTMS 0 0 0 11227 506223.375 0.8651524847364656 -1 0.0921058654785156 12 Unmodified _NTIESLKDV_ ENSG00000180104|ENST00000512944|EXOC3 24.99096001346401 0.2132109383330889 3 {[QS]|[NT]}{I|L}E{[TV]|[{I|L}S]}KDV 9 0 + 46.594 0.0 0.0 4.5791 4.5791 73.071 0.0 0.0 0.0 26.1247206755176 4.767120887678978 4.767120887678978 1.2493873660830062 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + + {[QS]|[NT]}{I|L}E{[TV]|[{I|L}S]}KDV;{[QS]|[NT]}{I|L}E{[TV]|[{I|L}S]}DKV;{[QS]|[NT]}{I|L}E[WR]TV;{[QS]|[NT]}{I|L}E{[TV]|[{I|L}S]}AATV;{[QS]|[NT]}{I|L}[{M(Oxidation (M))|F}V]PQTV;{[QS]|[NT]}{I|L}[{M(Oxidation (M))|F}V][QT]PV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[W{I|L}]PDV;[H{I|L}]{[NV]|[RG]}PQPDV;{[QS]|[NT]}[KA][RD][WK];[H{I|L}]{[NV]|[RG]}PQDPV 4.5791;4.4564;3.6627;3.3944;2.553;2.3748;1.6032;1.3756;1.3703;1.187 +;-;-;-;-;-;-;-;-;- + 620 + 1 1.428 61587.5 1.0 5881 5356 11227 HBL1_DMSO_200M_050219_1,11239 HBL1_DMSO_200M_050219_1,11239,NTIESLKDV False True NTIESLKDV 58.245639 509.774798572063 3736821.25 11227.0 ENSG00000180104|ENST00000512944|EXOC3 4.1895856857299805 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11240 58.249 191.0 347780.0 25 0 34550.0 + 45486 YTLREVDTV 9 106 548.2877321834666 1094.560911433733 2 548.2875854372978 MULTI CID FTMS 0 0 0 11227 409055.90625 0.3329668603857879 2 -0.1650466918945312 13 Unmodified _YTLREVDTV_ ENSG00000106268|ENST00000356714|NUDT1;nc|ENSG00000106268|P36639-1|NUDT1;nc|ENSG00000106268|P36639-2|NUDT1;nc|ENSG00000106268|P36639-3|NUDT1 51.41523569358685 0.0372669606867193 3 YTPV[VP]GYTV 10 5 + 54.832 0.0 0.0 5.0095 5.0095 78.475 0.0 0.0 0.0 14.399021133050958 13.450980400142562 13.450980400142562 3.679767852945943 0 1.742992819099939 1.5228787452803376 0.6643943297944485 0.0 YTPV[VP]GYTV;YTPV[PG]VYTV;YTPV[VP]GYS{I|L};YTPV[WP]HPV;YTPV[PG]VYS{I|L};{[ES]|[DT]|[{I|L}C]}V[{I|L}A][DV]YTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{I|L}{I|L}QQ{M(Oxidation (M))|F}V;{[ES]|[DT]|[{I|L}C]}V[{I|L}A][YV]DTV;YT[WP][VP]HPV;[{I|L}T]H[VP]DVDTV 5.0095;4.6733;3.7806;3.6554;3.4444;3.2825;3.2251;3.0074;2.6532;2.4555 -;-;-;-;-;-;-;-;-;- 729 + 1 1.428 56732.6 1.0 5882 5356 11227 HBL1_DMSO_200M_050219_1,11240 HBL1_DMSO_200M_050219_1,11240,YTLREVDTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11241 58.253 220.0 611800.0 25 0 35586.0 + 13382 HLISTINTV 9 169 499.28719933615326 996.5598457391064 2 499.2880737185478 MULTI CID FTMS 0 0 0 11227 266412.75 0.7606203655706566 1 -0.095672607421875 14 Unmodified _HLISTINTV_ ENSG00000125485|ENST00000372159|DDX31;ENST00000482620.1_1_9:135536593-135545636:-|nuORF;nc|ENSG00000125485|Q9H8H2-2|DDX31;nc|ENSG00000125485|Q9H8H2-3|DDX31;nc|ENSG00000125485|Q9H8H2-4|DDX31;nc|ENSG00000125485|Q9H8H2-6|DDX31;nc|ENSG00000125485|Q9H8H2|DDX31 50.855029805455786 0.0384952370514206 3 [KC]QKKYTV 8 7 + 27.713 0.0 0.0 2.7809 2.7809 68.737 0.0 0.0 0.0 1.3353972904683715 1.3353972904683715 1.3353972904683715 1.3353972904683715 0 0.3054621874040891 0.0 0.3054621874040891 0.0 [KC]QKKYTV;[H{I|L}]{I|L}{[MG]|[TS]}{I|L}T{[NV]|[RG]};[H{I|L}]{I|L}{[MG]|[TS]}{I|L}NTV;[KC]QKKYS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KG]{[VA]|[{I|L}G]}YTV;[H{I|L}]{I|L}{[MG]|[TS]}N{I|L}TV;[KC]T{I|L}[YR]T{I|L};[KC][AG]KKYTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KG]{[VA]|[{I|L}G]}YS{I|L};[H{I|L}]{I|L}{[MG]|[TS]}{I|L}GGTV 2.7809;2.6469;2.6429;2.2562;2.2456;2.0048;1.8983;1.8515;1.7209;1.719 -;-;+;-;-;-;-;-;-;- + 1279 + 1 1.428 104036.4 1.0 5883 5356 11227 HBL1_DMSO_200M_050219_1,11241 HBL1_DMSO_200M_050219_1,11241,HLISTINTV True True HLISTINTV 58.253466 499.288073718548 2547277.75 11227.0 nc|ENSG00000125485|Q9H8H2|DDX31;;ENSG00000125485|ENST00000372159|DDX31;;ENST00000482620.1_1_9:135536593-135545636:-|nuORF;;nc|ENSG00000125485|Q9H8H2-2|DDX31;;nc|ENSG00000125485|Q9H8H2-4|DDX31;;nc|ENSG00000125485|Q9H8H2-3|DDX31;;nc|ENSG00000125485|Q9H8H2-6|DDX31 4.142418305079143 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11242 58.258 233.0 588550.0 25 0 41552.0 -1 SLMCGHQI 8 175 481.2142089005948 960.4138648679896 2 481.2146789431572 MULTI CID FTMS 0 0 0 11227 257235.484375 0.2975546402526957 -2 0.1363563537597656 15 Carbamidomethyl (C),Oxidation (M) _SLM(Oxidation (M))C(Carbamidomethyl (C))GHQI_ nc|ENSG00000075239|P24752-2|ACAT1 14.581692164780916 0.6954967302934248 3 {[DA]|[EG]}R[QP]YN 7 -1 25.155 0.0 0.0 2.6192 0.0 0.0 0.0 113.01171624399106 113.01171624399106 10.272657074340898 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.7742275032520141 {[DA]|[EG]}R[QP]YN 2.6192 - 694 1 1.428 109595.2 1.0 5884 5356 11227 HBL1_DMSO_200M_050219_1,11242 HBL1_DMSO_200M_050219_1,11242,SLMCGHQI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11243 58.262 242.0 613060.0 25 0 42502.0 + 21835 AQAPGVITGV 10 153 456.7610092659271 911.5074655986542 2 456.7613098025322 MULTI CID FTMS 0 0 0 11227 246897.828125 0.4932799936766103 -6 0.5683746337890625 16 Unmodified _LPNQALGSI_ ENSG00000179950|ENST00000526683|PUF60;nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60 48.345845343767074 0.0439967357579942 3 [VG]PAQA{I|L}Y 8 6 40.077 0.0 0.0 4.3968 0.0 0.0 0.0 109.05616532529636 109.05616532529636 13.729025128383896 0.0 0.0 0.0 0 0.7134679910804405 1.5228787452803376 0.0 0.7059771852360797 [VG]PAQA{I|L}Y 4.3968 - 1181 1 1.428 115988.2 1.0 5885 5356 11227 HBL1_DMSO_200M_050219_1,11243 HBL1_DMSO_200M_050219_1,11243,LPNQALGSI True False AQAPGVITGV 58.262336 456.761309802532 4724204.5 11227.0 ENSG00000179950|ENST00000526683|PUF60;;nc|ENSG00000179950|Q9UHX1-4|PUF60;;nc|ENSG00000179950|Q9UHX1-3|PUF60;;nc|ENSG00000179950|Q9UHX1-5|PUF60;;nc|ENSG00000179950|Q9UHX1-6|PUF60;;nc|ENSG00000179950|Q9UHX1-2|PUF60 6.832770029703776 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11244 58.275 752.0 506460.0 25 0 38567.0 + 39967 VGAPLPFP 8 279 399.23178249013966 796.4490120470793 2 399.2317382693291 MULTI CID FTMS 0 0 0 11227 239538.5625 0.513581900278103 2 -0.1650466918945312 17 Unmodified _VGAPLPFP_ REV__ENST00000522145.5_1_5:151125888-151126107:-|nuORF 2.889219685676258 0.8067950007271085 3 Y{M(Oxidation (M))|F}AR{I|L}K 6 -1 + 31.507 0.0 0.0 3.9559 3.9559 80.098 0.0 0.0 0.0 5.173096466025491 8.98261470227343 5.173096466025491 8.98261470227343 0 0.4489700043360188 0.0 0.0 0.4163865622122673 Y{M(Oxidation (M))|F}AR{I|L}K;Y{M(Oxidation (M))|F}ARK{I|L};Y{M(Oxidation (M))|F}[K{I|L}]N{I|L};Y{M(Oxidation (M))|F}[K{I|L}]QV;Y{M(Oxidation (M))|F}[K{I|L}]VQ 3.9559;2.8281;1.0022;0.51958;0.26221 -;-;-;-;- 241 + 1 1.428 291693.2 1.0 5886 5356 11227 HBL1_DMSO_200M_050219_1,11244 HBL1_DMSO_200M_050219_1,11244,VGAPLPFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11245 58.287 656.0 159480.0 25 0 5575.8 -1 KGFDFKTCNVL 11 125 664.8389407194226 1327.663328505645 2 664.8392822146416 MULTI CID FTMS 0 0 0 11227 193967.421875 1.0 0 0.0 18 Carbamidomethyl (C) _KGFDFKTC(Carbamidomethyl (C))NVL_ ENSG00000151224|ENST00000372213|MAT1A 24.99096001346401 0.505407273373304 3 [AG]GSVAAPSQSANV{I|L} 15 -1 + 90.121 0.0 0.0 6.788 6.788 87.564 0.0 0.0 0.0 7.147642715192504 16.690067809585756 7.147642715192504 6.690067809585756 0 0.6109243748081782 1.2218487496163564 1.841129063296272 0.6549471895720985 [AG]GSVAAPSQSANV{I|L};[AG]GS[Q{I|L}]PSQSANV{I|L};{[QG]|[NA]}SVAAPSQSANV{I|L};{[SA]|[TG]}NVAAPSQSANV{I|L};[AG]GSVAAPSQSAGGV{I|L};[AG]GVSAAPSQSANV{I|L};[AG]GSVAAPS[AG]SANV{I|L};{[NV]|[RG]}ASAAPSQSANV{I|L};[KG]{[DA]|[EG]}AAPSQSANV{I|L};{[QG]|[NA]}S[Q{I|L}]PSQSANV{I|L} 6.788;6.2841;6.2496;6.19;6.1077;6.1077;5.9012;5.8691;5.7513;5.7474 -;-;-;-;-;-;-;-;-;- 1417 1 1.428 80667.5 1.0 5887 5356 11227 HBL1_DMSO_200M_050219_1,11245 HBL1_DMSO_200M_050219_1,11245,KGFDFKTCNVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11246 58.301 800.0 616710.0 25 0 45518.0 + 32612 SAYAVKVI 8 267 425.7553401614473 849.4961273896946 2 425.7551757693291 MULTI CID FTMS 0 0 0 11227 195379.546875 0.4498176489459281 -2 0.1363563537597656 19 Unmodified _SAYAVKVI_ ENSG00000173846|ENST00000372201|PLK3;ENST00000465443.5_1_1:45266117-45270174:+|nuORF 46.020951573049366 0.1579632664462935 3 {[SA]|[TG]}YAVKV{I|L} 8 0 + 60.615 0.0 0.0 7.1353 7.1353 87.821 0.0 0.0 0.0 19.598087263658726 6.127264369425902 6.127264369425902 6.127264369425902 0 1.3684151806525389 1.6989700043360187 0.0 0.0 + + {[SA]|[TG]}YAVKV{I|L};{[SA]|[TG]}YAVK{I|L}V;{[SA]|[TG]}YAV{I|L}KV;{[SA]|[TG]}YAV{I|L}VK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VKVTG{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VKVAS{I|L};{[SA]|[TG]}Y[K{I|L}]VG{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VKTVG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AVYTG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AVYAS{I|L} 7.1353;6.4141;6.1347;5.3405;4.8283;4.8283;4.2426;4.2096;3.9841;3.9841 +;-;-;-;-;-;-;-;-;- + 1404 + 1 1.428 373351.8 1.0 5888 5356 11227 HBL1_DMSO_200M_050219_1,11246 HBL1_DMSO_200M_050219_1,11246,SAYAVKVI False True SAYAVKVI 58.300605 425.755175769329 2854772.75 11227.0 ENST00000465443.5_1_1:45266117-45270174:+|nuORF;;ENSG00000173846|ENST00000372201|PLK3 3.758444627126058 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11247 58.316 800.0 128790.0 25 0 10993.0 + + 12905 KIMDRFEEV 9 146 583.7970852256047 0 583.7968017458916 PEAK CID FTMS 0 0 0 11227 144202.359375 1.0 0 0.0 20 Unmodified _GYALVEWMVV_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;chr4:1740002-1740832|13|33.23|0.17|7.63|+|2|TACC3,None|1;ENST00000470808.1_1_4:1741140-1742845:+|nuORF;chr4:1740002-1740828|13|35.77|0.33|6.76|+|2|TACC3,None|1 10.823927491677226 0.3685635357628707 3 {I|L}MDM 4 -1 20.979 0.0 0.0 1.7998 0.0 0.0 128.094769607385 544.2742403619749 672.3690099693599 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}MDM 1.7998 - 344 + 1 1.428 82489.5 0.8100000023841858 5889 5356 11227 HBL1_DMSO_200M_050219_1,11247 HBL1_DMSO_200M_050219_1,11247,GYALVEWMVV False False KIMDRFEEV 58.315915 583.796801745892 566681.375 11227.0 chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENSG00000013810|ENST00000313288|TACC3;;chr4:1740002-1740832|13|33.23|0.17|7.63|+|2|TACC3,None|1;;ENST00000470808.1_1_4:1741140-1742845:+|nuORF;;chr4:1740002-1740828|13|35.77|0.33|6.76|+|2|TACC3,None|1 4.106912930806478 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11249 58.32 12.0 3627600.0 25 0 355280.0 + 45047 YPYEYEGGHI 10 59 614.2694948301781 1226.5244367271562 2 614.2698242068291 MULTI CID FTMS 0 0 0 11248 4608204.0 0.6887087551512626 1 -0.0693740844726562 1 Unmodified _YPYEYEGGHI_ ENSG00000101224|ENST00000245960|CDC25B;ENSG00000164045|ENST00000302506|CDC25A;nc|ENSG00000101224|P30305-2|CDC25B;nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B;nc|ENSG00000164045|P30304-2|CDC25A 71.13359017698441 0.0189001043006994 3 YPYEYEGG[H{I|L}] 10 0 + 96.93 0.0 0.0 7.9028 7.9028 90.191 0.0 0.0 0.0 82.23705952196511 4.884381005764311 4.884381005764311 6.53212513775344 0 1.0994850021680094 2.0 0.6549471895720985 0.0 + + YPYEYEGG[H{I|L}];YPYEYEN[H{I|L}];YPYE{[RE]|[WV]}E{[QN]|[E{I|L}]|[KN]};YP{I|L}[WD]EY{[QN]|[E{I|L}]|[KN]};YP{I|L}[WD]YE{[QN]|[E{I|L}]|[KN]};YPY[C(Carbamidomethyl (C))K][CS]G[H{I|L}];YPY[C(Carbamidomethyl (C))K][C(Carbamidomethyl (C))S][H{I|L}];YPY[C(Carbamidomethyl (C))K][HN][{M(Oxidation (M))|F}V];[HN][TA]E[WD]{I|L}{[QN]|[E{I|L}]|[KN]};[HN]{[QN]|[E{I|L}]|[KN]}[Y{M(Oxidation (M))|F}]Y{[QN]|[E{I|L}]|[KN]} 7.9028;7.3702;5.4152;4.5119;4.4287;4.1386;3.606;3.0502;0.80452;0.39937 +;-;-;-;-;-;-;-;-;- + 256 + 1 1.428 36069.4 1.0 5890 5357 11248 HBL1_DMSO_200M_050219_1,11249 HBL1_DMSO_200M_050219_1,11249,YPYEYEGGHI True True YPYEYEGGHI 58.320115 614.269824206829 108630376.0 11248.0 nc|ENSG00000101224|P30305-2|CDC25B;;nc|ENSG00000101224|P30305-4|CDC25B;;ENSG00000101224|ENST00000245960|CDC25B;;ENSG00000164045|ENST00000302506|CDC25A;;nc|ENSG00000101224|P30305-3|CDC25B;;nc|ENSG00000164045|P30304-2|CDC25A 9.24503262837728 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11250 58.321 53.0 1608300.0 25 0 127720.0 39380 VAIEHLDKI 9 116 519.3031821107118 1036.5918112882234 2 519.3036376833916 MULTI CID FTMS 0 0 0 11248 590908.1875 0.3611422592927601 1 -0.0693740844726562 2 Unmodified _VAIEHLDKI_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 51.629811660486645 0.0367964933207742 3 VA{I|L}KHVEE{I|L} 9 4 + 58.388 0.0 0.0 5.6327 5.6327 80.845 0.0 0.0 0.0 32.991275634974706 6.489116683026381 6.489116683026381 3.870764669780044 0 0.5 1.5228787452803376 1.1307196863200843 0.0 VA{I|L}KHVEE{I|L};VA{I|L}K{NN|[MP]|[D{I|L}]|[EV]}HE{I|L};[EP]{I|L}[PG]NAVK{I|L};{[QN]|[E{I|L}]|[KN]}H{NN|[MP]|[D{I|L}]|[EV]}AVK{I|L};{[QN]|[E{I|L}]|[KN]}H{[VA]|[{I|L}G]}EVK{I|L};{[QN]|[E{I|L}]|[KN]}P[HM]AVK{I|L};{[QN]|[E{I|L}]|[KN]}P[PG]NAVK{I|L};[EP]{I|L}[PG]GGAVK{I|L} 5.6327;5.2593;1.0619;0.65098;0.57459;0.40471;0.36057;0.17781 -;-;-;-;-;-;-;- 1600 + 1 1.428 69083.5 1.0 5891 5357 11248 HBL1_DMSO_200M_050219_1,11250 HBL1_DMSO_200M_050219_1,11250,VAIEHLDKI True True VPQSHMPEI 58.321494 519.303637683392 17933912.0 11248.0 ENSG00000196712|ENST00000358273|NF1;;nc|ENSG00000196712|P21359-3|NF1;;nc|ENSG00000196712|P21359-4|NF1;;NF1|p.H1962Pfs*2|1|0.23|ENSG00000196712|chr17:31334908-31334909|-/C|frameshift_variant;;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;;nc|ENSG00000196712|P21359-6|NF1;;nc|ENSG00000196712|P21359-5|NF1;;nc|ENSG00000196712|P21359-2|NF1 2.920426925023397 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11251 58.323 36.0 3430900.0 25 0 570390.0 + 33735 SLAEGLRTV 9 133 473.2711800614083 944.5278071896166 2 473.2712280154228 MULTI CID FTMS 0 0 0 11248 1480519.375 0.922788383178109 -2 0.1877784729003906 3 Unmodified _SLAEGLRTV_ ENSG00000111331|ENST00000228928|OAS3 34.93206674587334 0.1032771302489716 3 {[TV]|[{I|L}S]}AEG{I|L}RTV 9 0 + 81.481 0.0 0.0 8.6266 8.6266 88.632 0.0 0.0 0.0 27.147642715192504 4.149733479708189 4.149733479708189 4.149733479708189 0 1.274227503252014 2.0 1.1237125054200234 0.2887254899964357 + + {[TV]|[{I|L}S]}AEG{I|L}RTV;{[TV]|[{I|L}S]}AEG{I|L}RS{I|L};{[TV]|[{I|L}S]}AEVARTV;{[TV]|[{I|L}S]}AEVARS{I|L};{[TV]|[{I|L}S]}AW{I|L}[VG]TV;{[TV]|[{I|L}S]}AW{I|L}[VG]S{I|L};{[TV]|[{I|L}S]}AEV[WK]{I|L};[VS][DV]G{I|L}RTV;{[TV]|[{I|L}S]}[RD]V[VG]TV;[VS][DV]G{I|L}RS{I|L} 8.6266;8.1873;7.9351;7.4957;6.6545;6.2151;5.0767;4.2308;3.9022;3.7915 +;-;-;-;-;-;-;-;-;- + 649 + 1 1.428 99168.4 1.0 5892 5357 11248 HBL1_DMSO_200M_050219_1,11251 HBL1_DMSO_200M_050219_1,11251,SLAEGLRTV True True SLAEGLRTV 58.322673 473.271228015423 9775826.0 11248.0 ENSG00000111331|ENST00000228928|OAS3 5.811187744140625 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11252 58.325 31.0 2603400.0 25 0 819550.0 -1 0 31 1199.830063771299 0 1199.829638659954 PEAK CID FTMS 0 0 0 11248 1168599.125 0.9308616082127928 2 -0.0887413024902343 4 3 E 1 -1 6.9897 0.0 0.0 0.29152 0.0 0.0 1741.417218444113 524.1639498346311 2265.581168278744 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.29152 - 2 + 1 1.428 72675.8 1.0 5893 5357 11248 HBL1_DMSO_200M_050219_1,11252 HBL1_DMSO_200M_050219_1,11252, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11253 58.326 41.0 1067200.0 25 0 73638.0 + 18401 KVVDVVRNL 9 86 347.88540996247553 1040.6344004876266 3 347.8852722048759 MULTI CID FTMS 0 0 0 11248 867470.375 0.8388370903397963 -1 0.095672607421875 5 Unmodified _KVVDVVRNL_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 29.081581746732265 0.1611639662936252 3 PV{I|L}[RN] 5 6 29.195 0.0 0.0 2.8055 0.0 0.0 443.2691793956329 0.0 443.2691793956329 0.0 17.90166453969949 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.75 PV{I|L}[RN] 2.8055 - 91 + 1 1.428 45223.7 1.0 5894 5357 11248 HBL1_DMSO_200M_050219_1,11253 HBL1_DMSO_200M_050219_1,11253,KVVDVVRNL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11254 58.328 7.4 4569600.0 25 0 539030.0 + 26886 PDGRIIKV 8 58 449.27935754995184 896.5441621667037 2 449.2791625857353 MULTI CID FTMS 0 0 0 11248 825332.0 0.5847984687277716 -1 0.095672607421875 6 Unmodified _PDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 22.736283301280096 0.5659792798204337 3 [DP]{[NV]|[RG]}{I|L}{I|L}KV 8 0 + 43.456 0.0 0.0 4.847 4.847 87.84 0.0 0.0 0.0 11.539843494255006 32.99832993881885 11.539843494255006 43.4559048444256 0 0.7134679910804405 1.5228787452803376 0.0 0.0 + + [DP]{[NV]|[RG]}{I|L}{I|L}KV 4.847 + + 42 1 1.428 32776.6 1.0 5895 5357 11248 HBL1_DMSO_200M_050219_1,11254 HBL1_DMSO_200M_050219_1,11254,PDGRIIKV False False PDGRIIKV 58.327525 449.279162585735 7657530.5 11248.0 ENSG00000138071|ENST00000260641|ACTR2;;nc|ENSG00000138071|P61160-2|ACTR2 0.0793872376283009 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11255 58.329 32.0 874240.0 25 0 59399.0 + 36622 TARPLVQTI 9 62 499.8037299419941 997.592906950788 2 499.8046752810478 MULTI CID FTMS 0 0 0 11248 598555.4375 0.1959323297355175 -4 0.3026466369628906 7 Unmodified _TARPLVQTI_ ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C 16.149105407346934 0.3995459350917656 3 HT{I|L} 3 7 25.445 0.0 0.0 2.5507 0.0 0.0 628.3910464544975 0.0 628.3910464544975 0.0 14.731975075880328 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 HT{I|L} 2.5507 - 30 + 1 1.428 28639.2 1.0 5896 5357 11248 HBL1_DMSO_200M_050219_1,11255 HBL1_DMSO_200M_050219_1,11255,TARPLVQTI False True TARPLVQTI 58.328705 499.804675281048 66347260.0 11248.0 ENSG00000142945|ENST00000372224|KIF2C;;nc|ENSG00000142945|Q99661-2|KIF2C 4.2103956540425616 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11256 58.331 83.0 990780.0 25 0 94925.0 + 31241 RLTEEFQNV 9 123 568.2906387673037 1134.5667246014073 2 568.2906982302666 MULTI CID FTMS 0 0 0 11248 576287.9375 0.3576102518946278 1 -0.0693740844726562 8 Unmodified _RLTEEFQNV_ ENSG00000122687|ENST00000242257|MRM2;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;ENST00000486040.1_1_7:2274759-2277695:-|nuORF 40.23920728925047 0.0741434193262949 3 [R{I|L}]TEE{M(Oxidation (M))|F}QNV 9 0 + 55.742 0.0 0.0 4.9131 4.9131 80.346 0.0 0.0 0.0 2.632192780232785 37.7439966936377 2.632192780232785 5.630451992502863 0 0.6109243748081782 0.0 0.7059771852360797 0.0 + + [R{I|L}]TEE{M(Oxidation (M))|F}QNV;[AG]DKKE{M(Oxidation (M))|F}QNV;[R{I|L}]TEE{M(Oxidation (M))|F}[AG]NV;[R{I|L}]TEE{M(Oxidation (M))|F}QGGV;[KG][KG]EE{M(Oxidation (M))|F}QNV;{[QD]|[EN]|[WG]|[KD]|[RS]}KKE{M(Oxidation (M))|F}QNV;[AG]DKKE{M(Oxidation (M))|F}[AG]NV;[AG]DKKE{M(Oxidation (M))|F}QGGV;{[TV]|[{I|L}S]}[W{I|L}]E{M(Oxidation (M))|F}QNV;[R{I|L}]TEE{M(Oxidation (M))|F}[AG]GGV 4.9131;4.4168;4.1015;4.1015;3.8873;3.7921;3.6091;3.6091;3.3868;3.2937 +;-;-;-;-;-;-;-;-;- + 766 1 1.428 66094.8 1.0 5897 5357 11248 HBL1_DMSO_200M_050219_1,11256 HBL1_DMSO_200M_050219_1,11256,RLTEEFQNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11257 58.332 25.0 1049600.0 25 0 95025.0 27281 PHHIIVKFP 9 59 363.2197544474018 1086.6374339424056 3 363.2196838259697 MULTI CID FTMS 0 0 0 11248 436915.0 0.8914314249138521 -5 0.3933944702148437 9 Unmodified _PHHIIVKFP_ ENSG00000156469|ENST00000287025|MTERF3;nc|ENSG00000156469|Q96E29-2|MTERF3;nc|ENSG00000156469|Q96E29-3|MTERF3 2.302733041254933 0.8342969208511092 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H 3 6 7.4473 0.0 0.0 0.68535 0.0 0.0 0.0 712.4437748450024 712.4437748450024 2.8431811792050627 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H 0.68535 + + 14 1 1.428 27985.0 1.0 5898 5357 11248 HBL1_DMSO_200M_050219_1,11257 HBL1_DMSO_200M_050219_1,11257,PHHIIVKFP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11258 58.333 33.0 828070.0 25 0 105920.0 + 25386 NAYPYCRTI 9 52 550.7626178543694 0 550.7624389529228 PEAK CID FTMS 0 0 0 11248 390215.03125 0.9340760581689496 -4 0.3026466369628906 10 Unmodified _NAYWLWTF_ ENSG00000180957|ENST00000335272|PITPNB;nc|ENSG00000180957|P48739-2|PITPNB;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;nc|ENSG00000180957|P48739-3|PITPNB 12.531546534597751 0.5131024102181418 3 YPW 3 6 18.812 0.0 0.0 1.711 0.0 0.0 185.07563746479497 465.21775232486567 650.2933897896606 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 YPW 1.711 - 33 + 1 1.428 29355.6 1.0 5899 5357 11248 HBL1_DMSO_200M_050219_1,11258 HBL1_DMSO_200M_050219_1,11258,NAYWLWTF False False NAYPYCRTI 58.332948 550.762438952923 4161741.0 11248.0 ENSG00000180957|ENST00000335272|PITPNB;;nc|ENSG00000180957|P48739-2|PITPNB;;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;;nc|ENSG00000180957|P48739-3|PITPNB 0.1737316449483235 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11259 58.334 30.0 1290100.0 25 0 179170.0 -1 GVGKPGMP 8 79 379.6951617776405 0 379.6952697634697 PEAK CID FTMS 0 0 0 11248 329229.375 0.1238351176455598 -4 0.3026466369628906 11 Oxidation (M) _GVGKPGM(Oxidation (M))P_ ENSG00000144810|ENST00000652472|COL8A1 10.183394434864962 0.5394990767616434 3 D 1 -1 9.2917 0.0 0.0 1.2268 0.0 0.0 523.2746486511811 116.05114160709218 639.3257902582733 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 D 1.2268 - 14 + 1 1.428 40127.9 1.0 5900 5357 11248 HBL1_DMSO_200M_050219_1,11259 HBL1_DMSO_200M_050219_1,11259,GVGKPGMP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11260 58.335 33.0 921710.0 25 0 64866.0 + 30408 RAWPRRRA 8 69 534.8188848721347 1067.6232168110694 2 534.8186523318291 MULTI CID FTMS 0 0 0 11248 312468.03125 1.0 0 0.0 12 Unmodified _RAWPRRRA_ REV__ENST00000421834.6_3_6:56708223-56708352:-|nuORF 5.230669730166228 0.792582437072536 3 V 1 -1 9.8329 0.0 0.0 0.92101 0.0 0.0 950.5433198157554 0.0 950.5433198157554 0.0 3.634993639681312 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.92101 - 19 + 1 1.428 31093.9 1.0 5901 5357 11248 HBL1_DMSO_200M_050219_1,11260 HBL1_DMSO_200M_050219_1,11260,RAWPRRRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11261 58.337 49.0 558070.0 25 0 52295.0 + 42196 VSEPLAPL 8 64 413.2379010717148 824.4612492102297 2 413.2381469607353 MULTI CID FTMS 0 0 0 11248 237809.15625 0.3569378244028829 -10 0.9808998107910156 13 Unmodified _VSEPLAPL_ REV__ENSG00000158828|ENST00000321556|PINK1;REV__ENST00000400490.2_1_1:20972014-20977181:+|nuORF;REV__ENST00000492302.1_1_1:20975445-20977181:+|nuORF;REV__nc|ENSG00000158828|Q9BXM7-2|PINK1 2.577480529830294 0.808687252328423 3 V 1 -1 9.8329 0.0 0.0 1.1926 0.0 0.0 707.3817336846422 0.0 707.3817336846422 0.0 3.600796517029784 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1926 + + 8 + 1 1.428 26353.6 1.0 5902 5357 11248 HBL1_DMSO_200M_050219_1,11261 HBL1_DMSO_200M_050219_1,11261,VSEPLAPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11262 58.342 289.0 341920.0 25 0 21063.0 + 26481 NTPEYMEKI 9 130 562.7682882856425 1123.5220236380849 2 562.7726928591728 MULTI CID FTMS 0 0 0 11248 202868.203125 0.131571755097117 -6 0.5343780517578125 14 Unmodified _NTPEYMEKI_ ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2 28.49450938151212 0.1686335738423394 3 {[QS]|[NT]}PEYEMK{I|L} 9 2 + 53.343 0.0 0.0 4.7478 4.7478 82.457 0.0 0.0 0.0 19.06675764823196 14.921525057367404 14.921525057367404 8.927900303521312 0 0.7059771852360797 2.0 0.0 0.3252574989159953 {[QS]|[NT]}PEYEMK{I|L};{[QS]|[NT]}PEY{[WT]|[RM]}T{I|L};{[QS]|[NT]}{I|L}[{M(Oxidation (M))|F}E]EMK{I|L};{[QS]|[NT]}P{[{M(Oxidation (M))|F}C]|[YS]}[NG]MK{I|L};{[QS]|[NT]}{I|L}[{M(Oxidation (M))|F}E]{[WT]|[RM]}T{I|L};[EP]YMEKNT{I|L};{[QS]|[NT]}PE{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}C]|[YS]}T{I|L};{[QS]|[NT]}P{[{M(Oxidation (M))|F}C]|[YS]}[C(Carbamidomethyl (C))R]KV;{[QS]|[NT]}[WC(Carbamidomethyl (C))][TA]MK{I|L};{[QS]|[NT]}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[C(Carbamidomethyl (C))C]K{I|L} 4.7478;3.9532;3.7954;3.0631;3.0007;2.8137;2.6874;2.4292;2.3705;2.3081 -;-;-;-;-;-;-;-;-;- 404 + 1 1.428 81301.6 1.0 5903 5357 11248 HBL1_DMSO_200M_050219_1,11262 HBL1_DMSO_200M_050219_1,11262,NTPEYMEKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11263 58.349 411.0 137390.0 25 0 24838.0 -1 0 43 1026.4290989136434 3076.2654673411307 3 1027.098315417767 MULTI CID FTMS 0 0 0 11248 161869.390625 0.4366016062775709 -4 0.3026466369628906 15 3 G{M(Oxidation (M))|F}{[HG]|PP}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 8 -1 13.148 0.0 0.0 0.42741 0.0 0.0 1652.5666891202302 484.2573946588501 2136.8240837790804 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 G{M(Oxidation (M))|F}{[HG]|PP}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 0.42741 - 24 + 1 1.428 54147.5 1.0 5904 5357 11248 HBL1_DMSO_200M_050219_1,11263 HBL1_DMSO_200M_050219_1,11263, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11264 58.356 364.0 59406.0 25 0 8710.2 -1 0 38 900.3775512576103 0 900.3775512576103 PEAK CID FTMS 0 0 0 -1 0 16 3 T 1 -1 3.4949 0.0 0.0 0.19429 0.0 0.0 1183.4369739978392 511.2183931940062 1694.6553671918457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.19429 - 1 + 1 1.428 26041.9 1.0 5905 5357 11248 HBL1_DMSO_200M_050219_1,11264 HBL1_DMSO_200M_050219_1,11264, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11265 58.364 479.0 448570.0 25 0 37323.0 + 22180 LPQEFRERI 9 158 396.5559610234732 1186.6460536706195 3 396.5557739138603 MULTI CID FTMS 0 0 0 11248 158405.0 0.1535723097700026 -7 0.6640472412109375 17 Unmodified _LPQEFRERI_ ENSG00000080839|ENST00000373664|RBL1;nc|ENSG00000080839|P28749-2|RBL1 32.037481411007896 0.1235546156350648 3 {I|L}PQE{I|L} 5 4 55.962 0.0 0.0 4.716 0.0 0.0 0.0 603.3011096172838 603.3011096172838 38.05707240970889 0.0 0.0 0.0 0 0.2302046884880938 1.3979400086720375 0.0 0.7742275032520141 {I|L}PQE{I|L} 4.716 - 365 + 1 1.428 176911.5 1.0 5906 5357 11248 HBL1_DMSO_200M_050219_1,11265 HBL1_DMSO_200M_050219_1,11265,LPQEFRERI True True LPQEFRERI 58.364338 396.55577391386 21875918.0 11248.0 ENSG00000080839|ENST00000373664|RBL1;;nc|ENSG00000080839|P28749-2|RBL1 3.542392571767172 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11266 58.37 302.0 276760.0 25 0 19352.0 + 37501 TLGINQALYY 10 121 578.3062031240389 0 578.3068725466728 PEAK CID FTMS 0 0 0 11248 172201.421875 0.8802891556025715 -1 0.095672607421875 18 Unmodified _TLGINQALYY_ REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENST00000458716.2_1_8:77616323-77620415:+|nuORF;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4 10.073929032068715 0.3742530088597855 3 VN{I|L} 3 -1 11.95 0.0 0.0 1.035 0.0 0.0 172.08527377186084 653.2882049640747 825.3734787359356 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 VN{I|L} 1.035 - 64 + 1 1.428 69401.2 1.0 5907 5357 11248 HBL1_DMSO_200M_050219_1,11266 HBL1_DMSO_200M_050219_1,11266,TLGINQALYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11267 58.376 366.0 216200.0 25 0 20050.0 + -1 ACRRYFYFFYD 11 99 825.3631386180506 1648.711724302901 2 825.3614379763603 MULTI CID FTMS 0 0 0 11248 146153.40625 0.3881972621641659 -3 0.2320289611816406 19 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))AC(Carbamidomethyl (C))RRYFYFFYD_ REV__ENSG00000166268|ENST00000552032|MYRFL 0.0 0.8751479354844584 3 TAGAQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 11 -1 48.185 0.0 0.0 2.9226 0.0 0.0 479.1664601056656 0.0 479.1664601056656 0.0 22.34569493890543 0.0 0.0 0 0.6549471895720984 0.0 0.0 0.4247425010840047 TAGAQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 2.9226 - 1040 1 1.428 60703.4 1.0 5908 5357 11248 HBL1_DMSO_200M_050219_1,11267 HBL1_DMSO_200M_050219_1,11267,ACRRYFYFFYD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11268 58.385 439.0 304430.0 25 0 29132.0 41764 VPVDLGAIV 9 147 441.7680744852922 881.5215960373844 2 441.7686340212822 MULTI CID FTMS 0 0 0 11248 99069.90625 0.0529299990483329 -35 3.0505905151367188 20 Unmodified _VPVDLGAIV_ ENST00000606561.5_1_1:23637140-23637182:-|nuORF 23.1484247019978 0.2366544122328345 3 VP 2 7 40.445 0.0 0.0 4.5881 0.0 0.0 0.0 682.3783773539861 682.3783773539861 21.76854275221835 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 + VP 4.5881 + + 664 + 1 1.428 104210.7 1.0 5909 5357 11248 HBL1_DMSO_200M_050219_1,11268 HBL1_DMSO_200M_050219_1,11268,VPVDLGAIV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11270 58.389 0.42 63394000.0 25 0 10601000.0 + 44632 YPFKPPKV 8 55 325.86048683472575 974.5596311043772 3 325.8604919314384 MULTI CID FTMS 0 0 0 11269 49173260.0 0.6375171043432093 -9 0.7927322387695312 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 11.640296217721598 0.738950129755968 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K 3 5 25.686 0.0 0.0 2.6357 0.0 0.0 0.0 599.3190054542398 599.3190054542398 -0.6888128940781257 0.0 -0.6888128940781257 0.0 0 0.0 2.0 0.0 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K 2.6357 + + 60 1 1.428 29996.5 1.0 5910 5358 11269 HBL1_DMSO_200M_050219_1,11270 HBL1_DMSO_200M_050219_1,11270,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11271 58.391 16.0 1696800.0 25 0 126790.0 + 4010 DALRSGLTV 9 60 466.26395573800335 930.5133585428068 2 466.2642089724541 MULTI CID FTMS 0 0 0 11269 1715683.25 0.0070742324013876 8 -0.4875259399414062 2 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 29.84058131909904 0.1515068451768857 3 {[DA]|[EG]}{I|L}R[SG]{I|L}TV 9 0 + 43.133 0.0 0.0 4.6354 4.6354 84.819 0.0 0.0 0.0 7.687872417789521 37.64863494647322 7.687872417789521 12.51303528385321 0 1.242992819099939 1.3010299956639813 0.0 0.0 + + {[DA]|[EG]}{I|L}R[SG]{I|L}TV;{[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[DA]|[EG]}{I|L}R[KT]EV;{[SA]|[TG]}[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 4.6354;3.2907;3.0784;3.0523 +;-;-;- + 48 1 1.428 26335.5 1.0 5911 5358 11269 HBL1_DMSO_200M_050219_1,11271 HBL1_DMSO_200M_050219_1,11271,DALRSGLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11272 58.392 5.2 6228000.0 25 0 723070.0 + -1 MCFDAFSLNCM 11 61 685.750320660136 1369.486088387072 2 685.7512084841728 MULTI CID FTMS 0 0 0 11269 5901916.0 0.2205544418473143 -5 0.3720207214355469 3 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))FDAFSLNCM(Oxidation (M))_ REV__ENSG00000138039|ENST00000294954|LHCGR;REV__nc|ENSG00000138039|P22888-2|LHCGR 1.1933415558491238 0.8695176722560516 3 YMDAS 5 -1 23.188 0.0 0.0 1.6932 0.0 0.0 320.15498579243587 479.1066683404906 799.2616541329265 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YMDAS 1.6932 - 30 + 1 1.428 28086.5 1.0 5912 5358 11269 HBL1_DMSO_200M_050219_1,11272 HBL1_DMSO_200M_050219_1,11272,MCFDAFSLNCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11273 58.393 13.0 1883400.0 25 0 205270.0 + 44815 YPNKYESVI 9 53 556.7847361597985 1111.554919386397 2 556.7848998904228 MULTI CID FTMS 0 0 0 11269 2600874.75 1.0 0 0.0 4 Unmodified _YPNKYESVI_ ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1 26.88365393820708 0.1891292719743517 3 V{I|L} 2 7 19.693 0.0 0.0 1.7716 0.0 0.0 881.3911906039735 0.0 881.3911906039735 0.0 7.81357210935475 0.0 0.0 0 0.5 0.0 0.0 0.0 + V{I|L} 1.7716 + + 58 + 1 1.428 28254.8 1.0 5913 5358 11269 HBL1_DMSO_200M_050219_1,11273 HBL1_DMSO_200M_050219_1,11273,YPNKYESVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11274 58.397 184.0 641150.0 25 0 49750.0 + 32391 RYSEYAEEF 9 87 597.25909589898 1192.50363886476 2 597.2597534060478 MULTI CID FTMS 0 0 0 11269 687688.3125 0.4387444419323235 2 -0.0769271850585937 5 Unmodified _RYSEYAEEF_ ENSG00000139505|ENST00000381801|MTMR6 38.17557092003332 0.0854718145212029 3 [Q{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YAEE{M(Oxidation (M))|F} 9 4 + 46.713 0.0 0.0 3.9172 3.9172 72.054 0.0 0.0 0.0 0.5012229596312423 12.354098072537418 0.5012229596312423 1.77417860276055 0 0.8252574989159953 0.0 0.0 0.6989700043360187 [Q{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YAEE{M(Oxidation (M))|F};[YV]{[WS]|[C(Carbamidomethyl (C)){I|L}]}YAEE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HQ]{[{M(Oxidation (M))|F}D]|MM}EE{M(Oxidation (M))|F};[YV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[C(Carbamidomethyl (C))S]EE{M(Oxidation (M))|F};[Q{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[YV]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[YV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DN]{M(Oxidation (M))|F}E{M(Oxidation (M))|F} 3.9172;3.7684;3.2126;2.0484;2.0111;1.5896;1.4826 -;-;-;-;-;-;- 243 1 1.428 91962.9 1.0 5914 5358 11269 HBL1_DMSO_200M_050219_1,11274 HBL1_DMSO_200M_050219_1,11274,RYSEYAEEF True True RYSEYAEEF 58.3966 597.259753406048 21307830.0 11269.0 ENSG00000139505|ENST00000381801|MTMR6 5.404383818308513 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11275 58.401 224.0 316370.0 25 0 42742.0 + -1 CDVCDYCCSHF 11 93 704.7241763184694 1407.4337997037387 2 704.7234374880791 MULTI CID FTMS 0 0 0 11269 506537.84375 0.492188039922553 -6 0.4627685546875 6 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))DVC(Carbamidomethyl (C))DYCCSHF_ REV__ENSG00000169962|ENST00000339381|TAS1R3 1.3295316138638542 0.8688751186870782 3 V{[QG]|[NA]} 3 -1 15.458 0.0 0.0 1.0983 0.0 0.0 1105.286074629787 0.0 1105.286074629787 0.0 5.3959062302381255 0.0 0.0 0 0.5 0.0 0.0 0.0 V{[QG]|[NA]} 1.0983 - 44 1 1.428 53529.7 1.0 5915 5358 11269 HBL1_DMSO_200M_050219_1,11275 HBL1_DMSO_200M_050219_1,11275,CDVCDYCCSHF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11276 58.405 206.0 374830.0 25 0 29320.0 5690 DPHSREPTL 9 133 526.2622641987033 1050.5099754642065 2 526.2634155154228 MULTI CID FTMS 0 0 0 11269 478531.46875 1.0 0 0.0 7 Unmodified _DPHSREPTL_ nc|ENSG00000248098|P12694-2|BCKDHA 15.847184025352805 0.4077185912009129 3 {[VA]|[{I|L}G]}A[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}PT{I|L} 9 6 {[VA]|[{I|L}G]}A[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F} + + 31.069 -12.887 -1.7866 2.9575 2.9575 50.132 0.0 0.0 0.0 0.0 3.379105996901764 0.0 0.0 0 0.5 0.0 0.5891368308784531 0.0 {[VA]|[{I|L}G]}A[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}PT{I|L} 2.9575 - 580 + 1 1.428 67645.2 1.0 5916 5358 11269 HBL1_DMSO_200M_050219_1,11276 HBL1_DMSO_200M_050219_1,11276,DPHSREPTL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11278 58.409 0.38 84575000.0 25 0 13507000.0 + 21205 LPDGRIIKV 9 60 337.55025021225714 1009.6289212369716 3 337.5501586794853 MULTI CID FTMS 0 0 0 11277 87676008.0 0.894147165049133 -2 0.0887413024902343 1 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 14.95716135407024 0.4318104563536712 3 {I|L}V{[ET]|[MV]}KPPK 8 7 31.776 0.0 0.0 3.1473 0.0 0.0 0.0 114.0566881769164 114.0566881769164 14.663128534713715 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {I|L}V{[ET]|[MV]}KPPK 3.1473 - 81 + 1 1.421 33603.4 1.0 5917 5359 11277 HBL1_DMSO_200M_050219_1,11278 HBL1_DMSO_200M_050219_1,11278,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11279 58.41 5.0 7089200.0 25 0 985640.0 + 36562 TALKIMKV 8 68 301.86155732224904 902.5628425669472 3 301.8614379763603 MULTI CID FTMS 0 0 0 11277 6401980.5 0.5385116491982107 2 -0.0629081726074218 2 Unmodified _TALKIMKV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 24.020572477871973 0.5389365498350341 3 K{I|L}MKV 5 3 26.498 0.0 0.0 2.9358 0.0 0.0 285.1676532132346 0.0 285.1676532132346 0.0 15.095369404736587 0.0 0.0 0 0.0 0.0 0.0 0.0 + K{I|L}MKV 2.9358 + + 71 + 1 1.421 33306.3 1.0 5918 5359 11277 HBL1_DMSO_200M_050219_1,11279 HBL1_DMSO_200M_050219_1,11279,TALKIMKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11280 58.411 56.0 1023100.0 25 0 71148.0 + 22660 LPYSEKMTV 9 95 534.2758451526947 1066.5371373721894 2 534.2756225466728 MULTI CID FTMS 0 0 0 11277 923038.0 0.6834496757311033 -2 0.0887413024902343 3 Unmodified _LPYSEKMTV_ ENSG00000198887|ENST00000361138|SMC5 36.506200033944 0.094635877243972 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SQYP{I|L}S{I|L} 9 7 + 57.249 0.0 0.0 5.3677 5.3677 76.884 0.0 0.0 0.0 6.384161505655037 9.110440078584276 6.384161505655037 1.9006039126944785 0 0.4698565171985375 1.6989700043360187 1.0189301784845295 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SQYP{I|L}S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SQYTVP{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[AG]YP{I|L}S{I|L};{I|L}PY{[ES]|[DT]|[{I|L}C]}G[R{M(Oxidation (M))|F}]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[AG]YTVP{I|L};{I|L}PY{[WS]|[C(Carbamidomethyl (C)){I|L}]}[R{M(Oxidation (M))|F}]V;[{I|L}P][C(Carbamidomethyl (C))H]MTVP{I|L};[{I|L}P][C(Carbamidomethyl (C))H]MP{I|L}S{I|L};VVN[YN]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SQ{[QG]|[NA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L} 5.3677;5.1895;4.5044;4.4556;4.3262;4.085;3.119;2.9695;2.5024;2.1632 -;-;-;-;-;-;-;-;-;- 609 1 1.421 52425.0 1.0 5919 5359 11277 HBL1_DMSO_200M_050219_1,11280 HBL1_DMSO_200M_050219_1,11280,LPYSEKMTV True True LPYSEKMTV 58.411471 534.275622546673 5973933.5 11277.0 ENSG00000198887|ENST00000361138|SMC5 3.208264112472534 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11281 58.415 181.0 474460.0 25 0 48947.0 + 44136 YLDPAQQNL 9 133 531.2664411847014 1060.5183294362027 2 531.2665893435478 MULTI CID FTMS 0 0 0 11277 624487.6875 0.8696192120704691 2 -0.0629081726074218 4 Unmodified _YLDPAQQNL_ ENST00000421406.1_1_1:247353282-247372753:-|nuORF 56.17704186161178 0.0281986971544335 3 [Y{I|L}]DPAQQN{I|L} 9 0 + 59.063 0.0 0.0 5.5693 5.5693 86.341 0.0 0.0 0.0 11.645293596321125 7.830145895351848 7.830145895351848 9.208187539523747 0 1.274227503252014 2.0 0.0 0.0 + + [Y{I|L}]DPAQQN{I|L};[Y{I|L}]DPA[AG]QN{I|L};[Y{I|L}]DPAQ[AG]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPAQQN{I|L};[Y{I|L}]PDAQQN{I|L};[Y{I|L}]DPA[AG][AG]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPAQ[AG]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPA[AG]QN{I|L};[Y{I|L}]DM[RH]N{I|L};[Y{I|L}]PDA[AG]QN{I|L} 5.5693;4.701;4.701;4.4712;3.9901;3.8369;3.603;3.603;3.2385;3.1219 +;-;-;-;-;-;-;-;-;- + 1239 1 1.421 72516.0 1.0 5920 5359 11277 HBL1_DMSO_200M_050219_1,11281 HBL1_DMSO_200M_050219_1,11281,YLDPAQQNL True True YLDPAQQNL 58.41499 531.266589343548 12400373.0 11277.0 ENST00000421406.1_1_1:247353282-247372753:-|nuORF 6.966017882029216 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11282 58.419 201.0 1618900.0 25 0 348450.0 -1 0 134 406.7550247545598 811.4954965759197 2 406.7551452517509 MULTI CID FTMS 0 0 0 11277 566302.625 0.4369847880729093 -2 0.0887413024902343 5 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV 7 -1 + 69.288 0.0 0.0 8.5383 8.5383 84.637 0.0 0.0 0.0 10.998416905869078 10.998416905869078 10.998416905869078 1.7165906731557357 0 1.6861818737241734 2.0 0.0 0.3252574989159953 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPPKV;P{M(Oxidation (M))|F}KPPKV;P{M(Oxidation (M))|F}KPPVK;[KP]{M(Oxidation (M))|F}PKPV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PPKPV;[KP]{M(Oxidation (M))|F}PPKV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PPPKV;[KP]P{M(Oxidation (M))|F}KPV;{[HG]|PP}K{M(Oxidation (M))|F}KPV 8.5383;8.3268;7.183;5.9789;5.2406;5.2406;5.029;5.029;4.8116;4.6576 -;-;-;-;-;-;-;-;-;- 487 1 1.421 254420.0 1.0 5921 5359 11277 HBL1_DMSO_200M_050219_1,11282 HBL1_DMSO_200M_050219_1,11282, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11283 58.423 250.0 517900.0 25 0 27808.0 18619 LAEVIKRL 8 157 314.5431632601671 940.6076603807012 3 314.5431701540947 MULTI CID FTMS 0 0 0 11277 335997.21875 1.0 0 0.0 6 Unmodified _LAEVIKRL_ ENSG00000214415|ENST00000398291|GNAT3 8.745405648335112 0.7712480472641603 3 {I|L}W{I|L}K 4 5 31.938 0.0 0.0 3.3955 0.0 0.0 0.0 397.2577983957896 397.2577983957896 18.73835032203424 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}W{I|L}K 3.3955 - 70 + 1 1.421 107323.6 1.0 5922 5359 11277 HBL1_DMSO_200M_050219_1,11283 HBL1_DMSO_200M_050219_1,11283,LAEVIKRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11284 58.428 221.0 589630.0 25 0 36902.0 + -1 VYPPPHQVF 9 136 542.2840294242719 0 542.2809936404228 PEAK CID FTMS 0 0 0 11277 235484.265625 0.477317994203138 12 -0.8451347351074219 7 Oxidation (M) _IM(Oxidation (M))PTPAPPML_ ENST00000540158.1_1_12:109535484-109537104:+|nuORF;ENSG00000076248|ENST00000242576|UNG;nc|ENSG00000076248|P13051-2|UNG 19.256988751693697 0.3042552096208299 3 VQD 3 -1 12.307 0.0 0.0 1.1369 0.0 0.0 427.209058700749 310.1774080865844 737.3864667873335 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VQD 1.1369 - 454 + 1 1.421 107911.9 1.0 5923 5359 11277 HBL1_DMSO_200M_050219_1,11284 HBL1_DMSO_200M_050219_1,11284,IMPTPAPPML False False VYPPPHQVF 58.427644 542.280993640423 6527456.5 11277.0 ENST00000540158.1_1_12:109535484-109537104:+|nuORF;;ENSG00000076248|ENST00000242576|UNG;;nc|ENSG00000076248|P13051-2|UNG 5.54904572168986 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11285 58.432 241.0 353030.0 25 0 32134.0 + -1 KCHSDCDQPQ 10 116 637.7468403710934 1273.4791278089867 2 638.2487670779228 MULTI CID FTMS 0 0 0 11277 222788.109375 1.0 0 0.0 8 2 Carbamidomethyl (C) _KC(Carbamidomethyl (C))HSDC(Carbamidomethyl (C))DQPQ_ REV__ENSG00000162068|ENST00000293973|NTN3 5.731851221503515 0.7001233259664787 3 [{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}PY 8 -1 30.072 0.0 0.0 2.3614 0.0 0.0 0.0 295.8969796060173 295.8969796060173 16.092437480817814 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}PY 2.3614 - 180 1 1.421 70818.4 1.0 5924 5359 11277 HBL1_DMSO_200M_050219_1,11285 HBL1_DMSO_200M_050219_1,11285,KCHSDCDQPQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11286 58.437 233.0 255200.0 25 0 17806.0 40276 VGTYRCYSSL 10 106 574.7755338341212 1147.5365147350424 2 574.7756835818291 MULTI CID FTMS 0 0 0 11277 186533.78125 0.2897678810667779 3 -0.0798072814941406 9 Unmodified _VGTYRCYSSL_ ENSG00000239998|ENST00000391738|LILRA2;nc|ENSG00000239998|Q8N149-2|LILRA2;nc|ENSG00000239998|Q8N149-3|LILRA2;nc|ENSG00000239998|Q8N149-4|LILRA2 13.042465956692816 0.6287021003332052 3 [H{I|L}]{[VA]|[{I|L}G]}SS{I|L} 7 7 33.21 0.0 0.0 2.894 0.0 0.0 0.0 437.1167509013112 437.1167509013112 14.93269051068889 0.0 0.0 0.0 0 0.5 1.5228787452803376 1.2302046884880935 0.0 [H{I|L}]{[VA]|[{I|L}G]}SS{I|L} 2.894 - 174 1 1.421 48059.3 1.0 5925 5359 11277 HBL1_DMSO_200M_050219_1,11286 HBL1_DMSO_200M_050219_1,11286,VGTYRCYSSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11287 58.441 235.0 400480.0 25 0 32239.0 + 44720 YPHEVPQI 8 123 491.75184777170034 981.4891426102008 2 491.7538940310478 MULTI CID FTMS 0 0 0 11277 158162.0625 0.2853009620055768 -6 0.391387939453125 10 Unmodified _YPHEVPQI_ ENSG00000163481|ENST00000295704|RNF25;ENST00000463188.5_1_2:219529923-219536693:-|nuORF 24.67388899826682 0.525179942228231 3 [EP]HYVP[Q{I|L}] 8 2 + 36.806 0.0 0.0 3.75 3.75 76.014 0.0 0.0 0.0 8.652340397648864 6.989700043360188 6.989700043360188 4.771212547196626 0 0.3494850021680094 1.2218487496163564 0.0 0.0 [EP]HYVP[Q{I|L}];[EP]HVYP[Q{I|L}];{[YC]|[HE]}VPYP[Q{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HEVP[Q{I|L}];{[YC]|[HE]}PYVP[Q{I|L}];{[VA]|[{I|L}G]}[YE]YP[Q{I|L}];[TP][YT]YP[Q{I|L}];[QP][WD]VP[Q{I|L}];{[YC]|[HE]}PVYP[Q{I|L}];[{I|L}P][HD]YP[Q{I|L}] 3.75;3.2639;2.8684;2.5234;2.3778;2.1984;2.1984;2.053;1.8917;1.5496 -;-;-;+;-;-;-;-;-;- + 680 1 1.421 77524.9 1.0 5926 5359 11277 HBL1_DMSO_200M_050219_1,11287 HBL1_DMSO_200M_050219_1,11287,YPHEVPQI False True YPHEVPQI 58.440943 491.753894031048 8577028.0 11277.0 ENSG00000163481|ENST00000295704|RNF25;;ENST00000463188.5_1_2:219529923-219536693:-|nuORF 2.642001231511434 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11288 58.447 326.0 168040.0 25 0 5538.2 -1 0 58 1159.267283032134 0 1158.932421863079 PEAK CID FTMS 0 0 0 11277 70216.46875 0.3058748529622566 1 -0.0575599670410156 11 3 AP 2 -1 9.464 0.0 0.0 0.40854 0.0 0.0 1866.2608406230584 279.1461275690063 2145.406968192065 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AP 0.40854 - 28 + 1 1.421 41761.9 1.0 5927 5359 11277 HBL1_DMSO_200M_050219_1,11288 HBL1_DMSO_200M_050219_1,11288, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11289 58.452 288.0 119230.0 25 0 15222.0 -1 0 45 957.0157348513604 0 957.0157348513604 PEAK CID FTMS 0 0 0 -1 0 12 3 P 1 -1 6.9897 0.0 0.0 0.36557 0.0 0.0 1191.5986561267457 620.3429049127561 1811.9415610395013 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.36557 - 8 + 1 1.421 33856.9 1.0 5928 5359 11277 HBL1_DMSO_200M_050219_1,11289 HBL1_DMSO_200M_050219_1,11289, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11290 58.457 281.0 193470.0 25 0 51871.0 -1 0 51 851.7053100466728 0 851.7053100466728 PEAK CID FTMS 0 0 0 -1 0 13 3 VS 2 -1 14.776 0.0 0.0 0.86848 0.0 0.0 1151.0834583728392 361.1880282037719 1512.271486576611 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 VS 0.86848 - 35 + 1 1.421 45195.9 1.0 5929 5359 11277 HBL1_DMSO_200M_050219_1,11290 HBL1_DMSO_200M_050219_1,11290, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11291 58.462 262.0 97696.0 25 0 9053.0 + -1 PYGCDNFFDLM 11 53 689.7741577029228 0 689.7741577029228 PEAK CID FTMS 0 0 0 -1 0 14 Carbamidomethyl (C) _PYGC(Carbamidomethyl (C))DNFFDLM_ REV__ENSG00000138075|ENST00000405322|ABCG5 3.2813086475875832 0.4761840153648598 3 {I|L}{M(Oxidation (M))|F} 2 -1 7.9588 0.0 0.0 0.57776 0.0 0.0 936.3109974353392 178.0515078180297 1114.3625052533691 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 0.57776 + + 16 + 1 1.421 29191.9 1.0 5930 5359 11277 HBL1_DMSO_200M_050219_1,11291 HBL1_DMSO_200M_050219_1,11291,PYGCDNFFDLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11293 58.466 18.0 2143600.0 25 0 521760.0 -1 SLRMWALP 8 55 495.26685458341984 988.5191562336396 2 495.2667724490166 MULTI CID FTMS 0 0 0 11292 2604778.5 0.4602907995241903 2 -0.022247314453125 1 Oxidation (M) _SLRM(Oxidation (M))WALP_ ENST00000540557.1_1_9:37727926-37784024:-|nuORF 24.67388899826682 0.525179942228231 3 {[TV]|[{I|L}S]}VWGE{[TV]|[{I|L}S]}V 9 -1 + 50.92 0.0 0.0 5.1512 5.1512 56.155 0.0 0.0 0.0 20.285371682087217 11.338031200885156 11.338031200885156 0.0 0 0.7742275032520141 2.0 0.3054621874040891 0.0 {[TV]|[{I|L}S]}VWGE{[TV]|[{I|L}S]}V;{[TV]|[{I|L}S]}VWG{[TV]|[{I|L}S]}EV;{NN|[MP]|[D{I|L}]|[EV]}[WK]{[TV]|[{I|L}S]}EV;{NN|[MP]|[D{I|L}]|[EV]}[WK]E{[TV]|[{I|L}S]}V 5.1512;5.1512;3.0991;3.0991 -;-;-;- 73 1 1.421 38057.2 1.0 5931 5360 11292 HBL1_DMSO_200M_050219_1,11293 HBL1_DMSO_200M_050219_1,11293,SLRMWALP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11294 58.468 50.0 1014500.0 25 0 102910.0 + 17995 KRVQFADTL 9 93 359.87319380727536 1076.597752022026 3 359.8730651736259 MULTI CID FTMS 0 0 0 11292 829303.0 0.4065226975475086 3 -0.0911407470703125 2 Unmodified _KRVQFADTL_ ENSG00000219607|ENST00000405617|PPP1R3G 15.847184025352805 0.4077185912009129 3 TK{I|L}{[QG]|[NA]}T{I|L} 7 6 34.015 0.0 0.0 3.1595 0.0 0.0 317.1570273438361 0.0 317.1570273438361 0.0 28.53031650958563 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 TK{I|L}{[QG]|[NA]}T{I|L} 3.1595 - 272 + 1 1.421 47115.4 1.0 5932 5360 11292 HBL1_DMSO_200M_050219_1,11294 HBL1_DMSO_200M_050219_1,11294,KRVQFADTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11296 58.472 27.0 1417100.0 25 0 245140.0 + 18206 KVEIAYLKA 9 71 517.8161283460782 1033.6177037589564 2 517.8161498904228 MULTI CID FTMS 0 0 0 11295 1571417.875 0.7634909685691533 -3 0.082275390625 1 Unmodified _KVEIAYLKA_ REV__ENST00000460671.1_1_1:58928367-58971854:-|nuORF 11.494710602746466 0.5255349189887087 3 [YV][DV]{I|L} 5 -1 17.42 0.0 0.0 1.6854 0.0 0.0 0.0 441.2841826010064 441.2841826010064 5.201812293369841 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.0 [YV][DV]{I|L} 1.6854 - 68 1 1.421 33307.4 1.0 5933 5361 11295 HBL1_DMSO_200M_050219_1,11296 HBL1_DMSO_200M_050219_1,11296,KVEIAYLKA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11297 58.473 20.0 2003600.0 25 0 297260.0 -1 0 80 346.7067071219137 0 346.7066223025322 PEAK CID FTMS 0 0 0 11295 1534759.875 1.0 0 0.0 2 3 V 1 -1 5.4846 0.0 0.0 0.79325 0.0 0.0 191.0922339686337 398.21677576236567 589.3090097309994 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.79325 - 2 + 1 1.421 37282.4 1.0 5934 5361 11295 HBL1_DMSO_200M_050219_1,11297 HBL1_DMSO_200M_050219_1,11297, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11298 58.475 73.0 1031100.0 25 0 116840.0 + 8227 EPYPEVSRI 9 92 545.2821384926146 1088.5497240520292 2 545.2825805544853 MULTI CID FTMS 0 0 0 11295 631382.125 0.2006573908461536 -10 0.6860275268554688 3 Unmodified _EPYPEVSRI_ ENSG00000165643|ENST00000425225|SOHLH1;nc|ENSG00000165643|Q5JUK2|SOHLH1 29.43715596616401 0.1566398223704148 3 [EP]YPEV 6 3 56.956 0.0 0.0 5.2322 0.0 0.0 0.0 371.2052648569636 371.2052648569636 32.774334638038454 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.7742275032520141 0.0 + [EP]YPEV 5.2322 + + 201 + 1 1.421 66437.6 1.0 5935 5361 11295 HBL1_DMSO_200M_050219_1,11298 HBL1_DMSO_200M_050219_1,11298,EPYPEVSRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11299 58.476 60.0 648960.0 25 0 45188.0 + 36509 TAFESIKSV 9 76 491.26691236005234 980.5192717869048 2 491.2656738162041 MULTI CID FTMS 0 0 0 11295 546008.3125 0.4160323254481423 -3 0.082275390625 4 Unmodified _TAFESIKSV_ chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1 18.373094154950223 0.3393451798331396 3 [TA]{M(Oxidation (M))|F}ES{I|L}KSV 9 0 + 51.098 0.0 0.0 5.2113 5.2113 86.215 0.0 0.0 0.0 37.18433447093204 6.840380319756534 6.840380319756534 10.457574905606748 0 0.3807196863200844 2.0 0.0 0.0 + + [TA]{M(Oxidation (M))|F}ES{I|L}KSV;[TA]{M(Oxidation (M))|F}E[RK]MV;[TA]{M(Oxidation (M))|F}[KA]P[{M(Oxidation (M))|F}T]V;[{M(Oxidation (M))|F}T][RK]E{M(Oxidation (M))|F}[PG];{[YC]|[HE]}VP[KA]{M(Oxidation (M))|F}[PG];{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}P[KA]{M(Oxidation (M))|F}[PG];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{NN|[MP]|[D{I|L}]|[EV]}[KA]{M(Oxidation (M))|F}[PG] 5.2113;4.1447;3.2814;1.7799;1.6008;1.6008;0.080222 +;-;-;-;-;-;- + 121 + 1 1.421 34907.8 1.0 5936 5361 11295 HBL1_DMSO_200M_050219_1,11299 HBL1_DMSO_200M_050219_1,11299,TAFESIKSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11300 58.478 87.0 739340.0 25 0 90643.0 + 45913 YYVAHPPVTY 10 82 605.3008425439976 1208.5871321547952 2 605.3010131716728 MULTI CID FTMS 0 0 0 11295 400510.90625 0.721804328770666 -1 0.0053482055664062 5 Unmodified _YYVAHPPVTY_ ENSG00000183508|ENST00000369448|TENT5C 54.773552608820026 0.052133998764723 3 YYV[HA]P[VP]TY 10 0 + 63.249 0.0 0.0 5.2333 5.2333 88.156 0.0 0.0 0.0 42.80394370788876 15.026975159433531 15.026975159433531 21.09189699011424 0 1.305462187404089 2.0 0.6549471895720984 0.0 + + YYV[HA]P[VP]TY;YYV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};YYV[HA]P[{I|L}T][{M(Oxidation (M))|F}V];YYV[HA]P{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]};YYV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[AG]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV]Y[RH]TY;[QA][EP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.2333;3.4882;3.2903;3.2102;2.7263;1.7582;0.50734 +;-;-;-;-;-;- + 130 + 1 1.421 50293.1 1.0 5937 5361 11295 HBL1_DMSO_200M_050219_1,11300 HBL1_DMSO_200M_050219_1,11300,YYVAHPPVTY True True YYVAHPPVTY 58.478089 605.301013171673 2959034.25 11295.0 ENSG00000183508|ENST00000369448|TENT5C 8.46509583791097 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11301 58.485 359.0 426410.0 25 0 35947.0 + 22048 LPPPPPPHL 9 151 482.7845332676538 963.5545136021076 2 482.7845947146416 MULTI CID FTMS 0 0 0 11295 346601.8125 0.1367239778816789 21 -1.916950225830078 6 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 67.41302359171755 0.0220989861905124 3 {I|L}PPPPPPH{I|L} 9 0 + 88.626 0.0 0.0 9.1978 9.1978 97.516 0.0 0.0 0.0 76.84298573660107 11.962724883926654 11.962724883926654 20.51152522447381 0 0.7302046884880937 2.0 0.0 0.0 + + {I|L}PPPPPPH{I|L};{I|L}PPPPP[H{I|L}]P;{I|L}PPP[YK]H{I|L};{I|L}PP[YK]PH{I|L};{I|L}P[YK]PPH{I|L};{I|L}YKPPPH{I|L};{I|L}PP[YK][H{I|L}]P;{I|L}P[YK]P[H{I|L}]P;{I|L}YKPP[H{I|L}]P;{I|L}YK[YK]H{I|L} 9.1978;7.0691;6.8919;6.8919;6.5749;6.0487;4.7632;4.4462;3.92;3.7499 +;-;-;-;-;-;-;-;-;- + 380 + 1 1.421 118700.1 1.0 5938 5361 11295 HBL1_DMSO_200M_050219_1,11301 HBL1_DMSO_200M_050219_1,11301,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11303 58.489 1.8 28441000.0 25 0 2653500.0 + 44646 YPFKPPKV 8 67 488.2869567505858 974.5593605679716 2 488.2869140505791 MULTI CID FTMS 0 0 0 11302 26076906.0 0.7684522925463071 -3 0.0798072814941406 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 34.10243960390752 0.3329570729325616 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 62.472 0.0 0.0 6.4103 6.4103 92.577 0.0 0.0 0.0 20.86774168753209 4.75390988664909 4.75390988664909 29.106829096975275 0 0.5796896906561032 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[KP]PYV;[KP]PK{M(Oxidation (M))|F}PYV;{[HG]|PP}KK{M(Oxidation (M))|F}PYV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[KP]PYV;[KP]{M(Oxidation (M))|F}[KP]PYV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[HG]|PP}KK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.4103;3.4236;3.2736;3.2736;1.6803;1.5303;1.2325;0.1716;0.1716 +;-;-;-;-;-;-;-;- + 186 + 1 1.418 46147.3 1.0 5939 5362 11302 HBL1_DMSO_200M_050219_1,11303 HBL1_DMSO_200M_050219_1,11303,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11304 58.49 2.0 19327000.0 25 0 2462000.0 + 21209 LPDGRIIKV 9 66 505.8216907176456 1009.6288285020912 2 505.8217651247978 MULTI CID FTMS 0 0 0 11302 28344170.0 0.919533394751982 1 -0.0688934326171875 2 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 22.774965066869 0.2414061210083823 3 {I|L}PD 3 6 46.682 0.0 0.0 4.6237 0.0 0.0 0.0 681.4426410869562 681.4426410869562 35.228787452803374 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}PD 4.6237 + + 22 + 1 1.418 37300.1 1.0 5940 5362 11302 HBL1_DMSO_200M_050219_1,11304 HBL1_DMSO_200M_050219_1,11304,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11305 58.491 11.0 4017600.0 25 0 434450.0 37687 TLNFRGEKL 9 77 539.3060581295514 1076.597563325903 2 539.3060790896416 MULTI CID FTMS 0 0 0 11302 4743671.0 0.8036478724428854 5 -0.4421844482421875 3 Unmodified _TLNFRGEKL_ ENSG00000119203|ENST00000238112|CPSF3 22.736283301280096 0.2418982879461534 3 {I|L}TK{I|L} 4 6 37.83 0.0 0.0 3.5138 0.0 0.0 603.2760487287125 0.0 603.2760487287125 0.0 27.34501850390537 0.0 0.0 0 0.5891368308784531 0.0 0.0 0.0 {I|L}TK{I|L} 3.5138 - 44 1 1.418 38417.0 1.0 5941 5362 11302 HBL1_DMSO_200M_050219_1,11305 HBL1_DMSO_200M_050219_1,11305,TLNFRGEKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11306 58.492 20.0 2184200.0 25 0 153070.0 + 4620 DAYTVQQL 8 82 469.235375756225 936.45619857925 2 469.2349120974541 MULTI CID FTMS 0 0 0 11302 2975832.75 0.7178870427133024 5 -0.4421844482421875 4 Unmodified _DAYTVQQL_ ENSG00000055130|ENST00000325222|CUL1 46.92087301778293 0.1537303740847981 3 {[DA]|[EG]}YT 4 4 27.652 0.0 0.0 2.9528 0.0 0.0 0.0 483.2570158002064 483.2570158002064 11.545612717470204 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5 0.0 + {[DA]|[EG]}YT 2.9528 + + 130 1 1.418 38756.1 1.0 5942 5362 11302 HBL1_DMSO_200M_050219_1,11306 HBL1_DMSO_200M_050219_1,11306,DAYTVQQL False True DAYTVQQL 58.492201 469.234912097454 26574244.0 11302.0 ENSG00000055130|ENST00000325222|CUL1 6.109852472941081 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11307 58.493 17.0 2867000.0 25 0 308350.0 + 20862 LMHMQQRV 8 72 521.7657974038294 1041.5170418744588 2 521.7657348513603 MULTI CID FTMS 0 0 0 11302 1989312.0 1.0 0 0.0 5 Unmodified _LMHMQQRV_ REV__ENSG00000110427|ENST00000658780|KIAA1549L;REV__nc|ENSG00000110427|Q6ZVL6|KIAA1549L 14.581692164780916 0.6954967302934248 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKVDVV 8 -1 40.367 0.0 0.0 3.8758 0.0 0.0 0.0 125.95445577510247 125.95445577510247 26.554556341805764 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKVDVV 3.8758 - 106 1 1.418 43990.3 1.0 5943 5362 11302 HBL1_DMSO_200M_050219_1,11307 HBL1_DMSO_200M_050219_1,11307,LMHMQQRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11308 58.497 169.0 811750.0 25 0 81827.0 + 36566 TALKIMKV 8 123 452.2882719317104 902.5619909302208 2 452.2886535525322 MULTI CID FTMS 0 0 0 11302 1364074.875 0.234139607346774 5 -0.4421844482421875 6 Unmodified _TALKIMKV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 63.22749603027936 0.1159808612811337 3 TA{I|L}K{I|L}MKV 8 0 + 95.788 0.0 0.0 10.613 10.613 93.758 0.0 0.0 0.0 28.22385916181561 8.33017357314715 8.33017357314715 8.33017357314715 0 2.2658715643802765 1.6989700043360187 0.0 0.3054621874040891 + + TA{I|L}K{I|L}MKV;TA{I|L}K{I|L}MVK;TA{I|L}KP{M(Oxidation (M))|F}KV;TA{I|L}KP{M(Oxidation (M))|F}VK;[TA]{I|L}K{I|L}MKV;V[VS]K{I|L}MKV;V[VS]K{I|L}MVK;V[VS]KP{M(Oxidation (M))|F}KV;[{I|L}A]TK{I|L}MKV;V[VS]KP{M(Oxidation (M))|F}VK 10.613;9.6899;9.4185;8.4956;7.4858;7.32;6.3971;6.1257;5.5592;5.2028 +;-;-;-;+;-;-;-;-;- + 628 + 1 1.418 107162.3 1.0 5944 5362 11302 HBL1_DMSO_200M_050219_1,11308 HBL1_DMSO_200M_050219_1,11308,TALKIMKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11309 58.501 201.0 582310.0 25 0 74080.0 + 12230 GQVPPLQSV 9 138 462.76121324174 923.50787355028 2 462.7613403201103 MULTI CID FTMS 0 0 0 11302 1007601.8125 0.6122705223962789 5 -0.4421844482421875 7 Unmodified _GQVPPLQSV_ ENSG00000106351|ENST00000300176|AGFG2 85.64151623876279 0.0161498729896241 3 {[QG]|[NA]}VPP{I|L}QSV 9 0 + 49.299 0.0 0.0 5.3382 5.3382 80.797 0.0 0.0 0.0 4.7184874961635614 9.889917747712635 4.7184874961635614 4.7184874961635614 0 1.8539171939081167 0.494850021680094 0.0 0.9489700043360187 + + {[QG]|[NA]}VPP{I|L}QSV;[AG]GVPP{I|L}QSV;{[QG]|[NA]}PVP{I|L}QSV;{[QG]|[NA]}VPP{I|L}[AG]SV;[{I|L}P]PQGVQSV;[AG]GPVP{I|L}QSV;{[QG]|[NA]}VPPAAVSV;[AG]GVPP{I|L}[AG]SV;[{I|L}P]PQGQVSV;[{I|L}P]QPGVQSV 5.3382;4.8273;4.4708;4.3411;4.2014;3.9599;3.9392;3.8349;3.7996;3.6848 +;-;-;-;-;-;-;-;-;- + 1159 1 1.418 93689.6 1.0 5945 5362 11302 HBL1_DMSO_200M_050219_1,11309 HBL1_DMSO_200M_050219_1,11309,GQVPPLQSV True True GQVPPLQSV 58.500502 462.76134032011 48278592.0 11302.0 ENSG00000106351|ENST00000300176|AGFG2 6.829790910085042 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11310 58.503 101.0 706950.0 25 0 128450.0 10736 FYGNVSRFI 9 113 368.194404519104 1101.5613841575118 3 368.1939269900322 MULTI CID FTMS 0 0 0 11302 662922.125 0.0375418941436599 51 -4.504478454589844 8 Unmodified _FYGNVSRFI_ ENSG00000181090|ENST00000460843|EHMT1;ENST00000475564.5_1_9:140711834-140729402:+|nuORF;ENST00000475704.2_1_9:140728608-140729402:+|nuORF;ENST00000494249.5_1_9:140710377-140729402:+|nuORF 14.40537977576856 0.4467465336100671 3 [VP]YY[TA]E{M(Oxidation (M))|F}{I|L} 9 7 [VP]YY[TA]E{M(Oxidation (M))|F} + + 13.979 -0.50136 -0.051661 1.2691 1.2691 48.447 0.0 0.0 0.0 0.0 -7.447274948966935 -7.447274948966935 0.0 0 0.0 0.0 0.0 0.0 [VP]YY[TA]E{M(Oxidation (M))|F}{I|L} 1.2691 - 92 + 1 1.418 65836.6 1.0 5946 5362 11302 HBL1_DMSO_200M_050219_1,11310 HBL1_DMSO_200M_050219_1,11310,FYGNVSRFI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11311 58.508 301.0 454170.0 25 0 27085.0 + 29296 QIHPELEGV 9 170 511.268704459649 1020.522855986098 2 511.2687866091728 MULTI CID FTMS 0 0 0 11302 329649.03125 1.0 0 0.0 9 Unmodified _QIHPELEGV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 65.23502041540118 0.0231836506122253 3 [H{I|L}]Q[EP]{I|L}EGV 9 2 + 69.75 0.0 0.0 6.8347 6.8347 88.687 0.0 0.0 0.0 18.03054133937272 1.706962271689747 1.706962271689747 7.889596516319337 0 0.4247425010840047 1.5228787452803376 1.1861818737241734 1.6861818737241734 [H{I|L}]Q[EP]{I|L}EGV;[H{I|L}]PEQ{I|L}EGV;[H{I|L}]Q[EP]{I|L}WV;[VG]E[YR]{I|L}EGV;[Q{I|L}]H[EP]{I|L}EGV;[H{I|L}]Q[HA]{I|L}{M(Oxidation (M))|F}GV;[H{I|L}]PEQ{I|L}WV;[{I|L}A][YE]Q{I|L}EGV;[EP]{I|L}HQ{I|L}EGV;[H{I|L}]PD[RV]EGV 6.8347;6.0616;5.4063;5.0679;4.9058;4.6925;4.6332;4.6262;4.4269;4.31 -;-;-;-;+;-;-;-;-;- + 2048 1 1.418 104086.4 1.0 5947 5362 11302 HBL1_DMSO_200M_050219_1,11311 HBL1_DMSO_200M_050219_1,11311,QIHPELEGV True True QIHPELEGV 58.508177 511.268786609173 1167393.5 11302.0 ENST00000574894.1_1_16:16367711-16371421:+|nuORF;;ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 6.6080641746521 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11312 58.514 294.0 421090.0 25 0 46859.0 + 40542 VIYDVSHNI 9 152 530.2771727249433 1058.5397925166865 2 530.2758666872978 MULTI CID FTMS 0 0 0 11302 330616.90625 1.0 0 0.0 10 Unmodified _VIYDVSHNI_ ENSG00000100220|ENST00000216038|RTCB 39.94969957227396 0.0757326808254658 3 [{I|L}V]YDVSHN{I|L} 9 0 + 62.954 0.0 0.0 5.9473 5.9473 78.021 0.0 0.0 0.0 27.147642715192504 1.4612803567823818 1.4612803567823818 1.4612803567823818 0 0.4247425010840047 2.0 0.0 0.9143943297944483 + + [{I|L}V]YDVSHN{I|L};[{I|L}V]YDVSHQV;[{I|L}V]YDVSH{I|L}N;[{I|L}V]YDVNHS{I|L};[{I|L}V]YDVNHTV;[{I|L}V]YDVSHGG{I|L};[{I|L}V]YDVSH[AG]V;[{I|L}V]YDV[HQ]SV;[{I|L}V]YDP[EP]N{I|L};[{I|L}V]YDP[EP]QV 5.9473;5.8092;5.3394;4.5454;4.4073;4.2135;4.0755;3.9091;3.5842;3.4462 +;-;-;-;-;-;-;-;-;- + 2067 + 1 1.418 99343.8 1.0 5948 5362 11302 HBL1_DMSO_200M_050219_1,11312 HBL1_DMSO_200M_050219_1,11312,VIYDVSHNI True True VIYDVSHNI 58.513576 530.275866687298 2612505.5 11302.0 ENSG00000100220|ENST00000216038|RTCB 5.2157894770304365 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11313 58.519 316.0 392620.0 25 0 78618.0 -1 0 99 712.2086640141919 711.2013875475918 1 712.2108032107353 MULTI CID FTMS 0 0 0 11302 298254.3125 0.7583786156850358 -1 0.0168991088867187 11 3 V 1 -1 11.99 0.0 0.0 1.6858 0.0 0.0 594.1218033574536 0.0 594.1218033574536 0.0 5.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.6858 - 4 + 1 1.418 95560.1 1.0 5949 5362 11302 HBL1_DMSO_200M_050219_1,11313 HBL1_DMSO_200M_050219_1,11313, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11314 58.527 421.0 442820.0 25 0 47465.0 16092 ITRHRTTL 8 205 333.20194919525983 0 333.2015258669853 PEAK CID FTMS 0 0 0 11302 233503.53125 1.0 0 0.0 12 Unmodified _ITRHRTTL_ L1PA6_dup546|chr2:49227587-49231532:-|1.156546377819926|0.2927699401366612|1.98|48.0|16|1|sense 5.230669730166228 0.5807325378471833 3 {I|L}T 2 6 19.024 0.0 0.0 2.8633 0.0 0.0 131.0926259241184 316.1423932654492 447.23501918956754 0.0 0.0 0.0 0.0 0 0.6307196863200843 0.0 0.6747425010840047 0.0 + {I|L}T 2.8633 + + 31 + 1 1.418 147372.2 1.0 5950 5362 11302 HBL1_DMSO_200M_050219_1,11314 HBL1_DMSO_200M_050219_1,11314,ITRHRTTL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 11315 58.533 320.0 200860.0 25 0 11830.0 + 26549 NVIQSTAVTTV 11 104 566.8146381878138 1131.6147234424277 2 566.8139526247978 MULTI CID FTMS 0 0 0 11302 193637.90625 0.5491349043074795 -1 0.0168991088867187 13 Unmodified _NVIQSTAVTTV_ ENSG00000164022|ENST00000672341|AIMP1;nc|ENSG00000164022|Q12904-2|AIMP1 29.84058131909904 0.3915366693542702 3 [PS]V[WP]{M(Oxidation (M))|F}VTTV 10 7 [PS]V[WP]{M(Oxidation (M))|F}V + + 17.809 9.459 1.1643 1.5738 1.5738 48.571 0.0 0.0 0.0 0.0 5.33977429681784 0.0 0.0 0 0.3494850021680094 0.0 0.3054621874040891 0.0 [PS]V[WP]{M(Oxidation (M))|F}VTTV 1.5738 - 308 + 1 1.418 58972.0 1.0 5951 5362 11302 HBL1_DMSO_200M_050219_1,11315 HBL1_DMSO_200M_050219_1,11315,NVIQSTAVTTV False True NVIQSTAVTTV 58.532683 566.813952624798 2501929.75 11302.0 nc|ENSG00000164022|Q12904-2|AIMP1;;ENSG00000164022|ENST00000672341|AIMP1 4.842937310536702 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11316 58.539 331.0 122580.0 25 0 10769.0 -1 EVCLKDPMSV 10 82 589.2840732393441 0 589.2830078005791 PEAK CID FTMS 0 0 0 11302 178130.609375 1.0 0 0.0 14 Carbamidomethyl (C) _EVC(Carbamidomethyl (C))LKDPMSV_ ENSG00000076826|ENST00000160298|CAMSAP3;nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3 10.823927491677226 0.3685635357628707 3 QE 2 -1 10.355 0.0 0.0 0.88014 0.0 0.0 834.3624142015414 82.06701837711171 916.4294325786532 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 QE 0.88014 - 16 + 1 1.418 35215.8 1.0 5952 5362 11302 HBL1_DMSO_200M_050219_1,11316 HBL1_DMSO_200M_050219_1,11316,EVCLKDPMSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11317 58.545 343.0 107310.0 25 0 13068.0 -1 0 60 652.411601253452 651.4043247868519 1 652.8536865115166 MULTI CID FTMS 0 0 0 -1 0 15 3 Y 1 -1 12.764 0.0 0.0 1.9595 0.0 0.0 470.33004302591286 0.0 470.33004302591286 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.9595 - 19 + 1 1.418 38433.9 1.0 5953 5362 11302 HBL1_DMSO_200M_050219_1,11317 HBL1_DMSO_200M_050219_1,11317, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11318 58.553 408.0 318670.0 25 0 46674.0 + 30227 QWRLYKYDM 9 129 434.8821835422676 0 434.8824645876884 PEAK CID FTMS 0 0 0 11302 173710.046875 0.734493761247045 -4 0.0991744995117187 16 Unmodified _QWRLYKYDM_ REV__ENSG00000107937|ENST00000360803|GTPBP4;REV__nc|ENSG00000107937|Q9BZE4-2|GTPBP4;REV__nc|ENSG00000107937|Q9BZE4-3|GTPBP4 2.302733041254933 0.3444685223463735 3 P{M(Oxidation (M))|F}K 3 -1 10.802 0.0 0.0 1.2448 0.0 0.0 56.25299394380995 436.2578611795248 492.5108551233348 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F}K 1.2448 - 10 + 1 1.418 113913.9 1.0 5954 5362 11302 HBL1_DMSO_200M_050219_1,11318 HBL1_DMSO_200M_050219_1,11318,QWRLYKYDM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11320 58.558 35.0 1885200.0 25 0 172940.0 18400 KVVDVVRNL 9 91 521.3244757684231 1040.634398603646 2 521.3246337771416 MULTI CID FTMS 0 0 0 11319 1148795.5 0.2449864796277419 5 -0.4386100769042969 1 Unmodified _KVVDVVRNL_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 15.248480904072842 0.4239247793462406 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKVDVV 8 6 51.133 0.0 0.0 4.9136 0.0 0.0 0.0 125.07078112242222 125.07078112242222 20.42719286378599 0.0 0.0 0.0 0 1.174742501084005 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKVDVV 4.9136 - 388 1 1.418 53869.5 1.0 5955 5363 11319 HBL1_DMSO_200M_050219_1,11320 HBL1_DMSO_200M_050219_1,11320,KVVDVVRNL False True LMVDHVTEV 58.557558 521.324633777142 10190596.0 11319.0 ENSG00000213523|ENST00000336283|SRA1;;ENST00000602875.5_1_5:139930287-139937028:-|nuORF 4.294450600941976 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11321 58.563 321.0 606910.0 25 0 41063.0 + 21010 QVPEKLDVV 9 179 513.7950056710407 1025.575458408881 2 513.7952148318291 MULTI CID FTMS 0 0 0 11319 330680.40625 0.5432296232928224 1 -0.141082763671875 2 Unmodified _LNVKVDPEI_ ENSG00000042445|ENST00000295802|RETSAT;ENST00000490291.1_1_2:85578731-85581633:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT 26.88365393820708 0.1891292719743517 3 [EP]K{I|L}DVVQV 9 8 + 50.167 0.0 0.0 4.8916 4.8916 82.161 0.0 0.0 0.0 6.054115068774138 26.28042213527562 6.054115068774138 7.752381912770105 0 0.1822333069283654 0.8538719643217619 1.3484261605781425 0.0 [EP]K{I|L}DVVQV;{[TV]|[{I|L}S]}[PG]{I|L}DVVQV;[TP][VG]{I|L}DVVQV;[VS][PA]{I|L}DVVQV;[PA][VS]{I|L}DVVQV;{[QV]|[N{I|L}]|[RA]|[KV]}V[MT]{I|L}[PA]AP;{[TV]|[{I|L}S]}[TP]PSVVQV;[DV]{I|L}APSVVQV;[PS]{[VA]|[{I|L}G]}{I|L}DVVQV;[VP]{[SA]|[TG]}{I|L}DVVQV 4.8916;4.1356;3.118;2.8568;2.772;2.6009;2.3567;2.3381;2.3311;2.3082 -;-;-;-;-;-;-;-;-;- 1599 1 1.418 148516.1 1.0 5956 5363 11319 HBL1_DMSO_200M_050219_1,11321 HBL1_DMSO_200M_050219_1,11321,LNVKVDPEI False False QVPEKLDVV 58.563397 513.795214831829 8547924.0 11319.0 ENSG00000042445|ENST00000295802|RETSAT;;ENST00000490291.1_1_2:85578731-85581633:-|nuORF;;nc|ENSG00000042445|Q6NUM9-2|RETSAT 1.1204979419708252 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11322 58.565 11.0 5390600.0 25 0 673890.0 + 14436 IFQGNVHNF 9 81 538.2706603036639 1074.5267676741278 2 538.2703124880791 MULTI CID FTMS 0 0 0 11319 3308480.0 0.9863446267519388 2 -0.205108642578125 3 Unmodified _IFQGNVHNF_ ENSG00000060688|ENST00000263694|SNRNP40;ENST00000489853.1_1_1:31732921-31754364:-|nuORF;nc|ENSG00000060688|Q96DI7-2|SNRNP40 54.773552608820026 0.0299037012502309 3 {I|L}{M(Oxidation (M))|F}Q[RN]HN{M(Oxidation (M))|F} 8 2 + 53.224 0.0 0.0 4.9532 4.9532 76.313 0.0 0.0 0.0 41.440868901038016 11.145217543024728 11.145217543024728 2.552725051033065 0 0.6861818737241735 0.9208187539523752 0.0 1.1861818737241734 {I|L}{M(Oxidation (M))|F}Q[RN]HN{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}Q[NG]VHN{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}[AG][RN]HN{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}[AG][NG]VHN{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}Q[RN]HGG{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}Q[RN][TP]{[CP]|[EA]};{I|L}{M(Oxidation (M))|F}Q[PA]{[QD]|[EN]|[WG]|[KD]|[RS]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}Q[NG]VHGG{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}Q[NG]V[TP]{[CP]|[EA]};{I|L}{M(Oxidation (M))|F}Q[DV][HC]T{I|L} 4.9532;4.7156;4.0912;3.8587;3.807;3.7689;3.6526;3.5744;3.5363;1.6885 -;+;-;-;-;-;-;-;-;- + 384 + 1 1.418 48239.3 1.0 5957 5363 11319 HBL1_DMSO_200M_050219_1,11322 HBL1_DMSO_200M_050219_1,11322,IFQGNVHNF True True IFQGNVHNF 58.564576 538.270312488079 36702264.0 11319.0 ENST00000489853.1_1_1:31732921-31754364:-|nuORF;;ENSG00000060688|ENST00000263694|SNRNP40;;nc|ENSG00000060688|Q96DI7-2|SNRNP40 6.600037097930908 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11323 58.566 35.0 2033400.0 25 0 439650.0 + 4454 DAYALNHTL 9 81 509.25362910442976 1016.4927052756595 2 509.2538635134697 MULTI CID FTMS 0 0 0 11319 1664506.0 0.005066949365197 -4 0.1487007141113281 4 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 75.76082778847304 0.0188720312721366 3 {[DA]|[EG]}YA{I|L}NH[{I|L}T] 9 0 + 81.691 0.0 0.0 8.0365 8.0365 94.836 0.0 0.0 0.0 38.41560210707705 22.08601813724389 22.08601813724389 12.26280941356464 0 1.2059771852360797 1.6989700043360187 1.916386562212267 0.3054621874040891 + + {[DA]|[EG]}YA{I|L}NH[{I|L}T];{[DA]|[EG]}YA{I|L}GGH[{I|L}T];{[DA]|[EG]}[TP]V{I|L}AD{[ES]|[DT]|[{I|L}C]};[H{I|L}]TNA{I|L}Y{[DA]|[EG]};[H{I|L}]TN{I|L}AY{[DA]|[EG]};[H{I|L}]NTA{I|L}Y{[DA]|[EG]};[H{I|L}]NT{I|L}AY{[DA]|[EG]};[H{I|L}]TNAY{I|L}{[DA]|[EG]};{[DA]|[EG]}[TP]A[{I|L}V]D{[ES]|[DT]|[{I|L}C]};[HN]{I|L}TA{I|L}Y{[DA]|[EG]} 8.0365;6.8302;3.5853;3.4757;3.258;3.2575;3.0397;2.9587;2.9245;2.8899 +;-;-;-;-;-;-;-;-;- + 569 + 1 1.418 56544.0 1.0 5958 5363 11319 HBL1_DMSO_200M_050219_1,11323 HBL1_DMSO_200M_050219_1,11323,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11324 58.567 66.0 1297100.0 25 0 103150.0 + -1 YESCCIPCCME 11 86 697.7292434406721 1393.443933948144 2 697.7301513552666 MULTI CID FTMS 0 0 0 11319 837455.25 1.0 0 0.0 5 2 Carbamidomethyl (C) _YESC(Carbamidomethyl (C))C(Carbamidomethyl (C))IPCCME_ REV__ENSG00000181191|ENST00000374571|PJA1;REV__nc|ENSG00000181191|Q8NG27-2|PJA1;REV__nc|ENSG00000181191|Q8NG27|PJA1 1.3295316138638542 0.8688751186870782 3 V 1 -1 11.42 0.0 0.0 0.81955 0.0 0.0 1276.3645481222636 0.0 1276.3645481222636 0.0 0.8240512432299596 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.81955 - 41 + 1 1.418 63926.4 1.0 5959 5363 11319 HBL1_DMSO_200M_050219_1,11324 HBL1_DMSO_200M_050219_1,11324,YESCCIPCCME False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11325 58.57 122.0 537700.0 25 0 47768.0 + 37995 TNPLSGCNSY 10 94 528.2267944975762 1054.4390360619525 2 528.7267944216728 MULTI CID FTMS 0 0 0 11319 613722.6875 0.4488629138167707 -1 0.0688934326171875 6 Unmodified _TNPLSGCNSY_ REV__ENSG00000140577|ENST00000268184|CRTC3;REV__nc|ENSG00000140577|Q6UUV7-3|CRTC3 16.149105407346934 0.5765757077271437 3 S{I|L}G{[C(Carbamidomethyl (C))G]|[NC]}SY 7 -1 29.134 0.0 0.0 2.763 0.0 0.0 312.1495250576544 0.0 312.1495250576544 0.0 16.65984644207013 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.0 S{I|L}G{[C(Carbamidomethyl (C))G]|[NC]}SY 2.763 - 319 + 1 1.418 54694.6 1.0 5960 5363 11319 HBL1_DMSO_200M_050219_1,11325 HBL1_DMSO_200M_050219_1,11325,TNPLSGCNSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11326 58.581 622.0 560430.0 25 0 49295.0 3058 AVLKHIAEL 9 279 331.87439502451934 0 331.8745300173759 PEAK CID FTMS 0 0 0 11319 227808.703125 1.0 0 0.0 7 Unmodified _AVLKHIAEL_ ENSG00000033178|ENST00000322244|UBA6;ENST00000429659.7_1_4:68529542-68566852:-|nuORF;nc|ENSG00000033178|A0AVT1-3|UBA6;nc|ENSG00000033178|A0AVT1-4|UBA6 26.88365393820708 0.1386685954232994 3 G 1 9 5.4846 0.0 0.0 0.82881 0.0 0.0 519.6231053793138 82.0670412652953 601.6901466446091 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.82881 - 113 + 1 1.418 274956.9 1.0 5961 5363 11319 HBL1_DMSO_200M_050219_1,11326 HBL1_DMSO_200M_050219_1,11326,AVLKHIAEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11327 58.59 524.0 283230.0 25 0 16369.0 1060 AGGNEDNVSV 10 180 481.2142089005948 960.4138648679896 2 481.2150756716728 MULTI CID FTMS 0 0 0 11319 221220.734375 0.2558949290892919 5 -0.4386100769042969 8 Unmodified _AGGNEDNVSV_ ENST00000552472.1_1_12:100166564-100166834:-|nuORF 10.073929032068715 0.6785112666868882 3 [Y{I|L}][YQ]Y 5 10 23.072 0.0 0.0 2.4022 0.0 0.0 0.0 227.067939622551 227.067939622551 8.467422566383007 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.805462187404089 [Y{I|L}][YQ]Y 2.4022 - 619 1 1.418 112264.9 1.0 5962 5363 11319 HBL1_DMSO_200M_050219_1,11327 HBL1_DMSO_200M_050219_1,11327,AGGNEDNVSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11328 58.601 605.0 438080.0 25 0 62602.0 + 26812 PAPPPPPVL 9 195 442.7663833920433 883.5182138508866 2 442.7659179568291 MULTI CID FTMS 0 0 0 11319 184388.875 0.2913186370355039 -5 0.1680679321289062 9 Unmodified _PAPPPPPVL_ ENSG00000114790|ENST00000465093|ARHGEF26;nc|ENSG00000114790|Q96DR7-3|ARHGEF26;nc|ENSG00000114790|Q96DR7-4|ARHGEF26 79.93452657146344 0.0175326119056068 3 APPPPPPV{I|L} 9 2 + 71.764 0.0 0.0 8.1225 8.1225 87.93 0.0 0.0 0.0 26.908314611623936 4.771212547196626 4.771212547196626 4.121804477866476 0 2.0774509799928715 1.3979400086720375 0.0 0.0 APPPPPPV{I|L};APPPPPVP{I|L};APPPPPP{I|L}V;APPPPPV{I|L}P;APPP[YK]V{I|L};AP[YK]PPV{I|L};APP[YK]PV{I|L};APPP[YK]{I|L}V;AP[YK]PVP{I|L};APP[YK]VP{I|L} 8.1225;7.656;7.5825;5.8306;5.8071;5.5958;5.556;5.267;5.1293;5.0894 -;-;-;-;-;-;-;-;-;- 1251 + 1 1.418 202287.6 1.0 5963 5363 11319 HBL1_DMSO_200M_050219_1,11328 HBL1_DMSO_200M_050219_1,11328,PAPPPPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11329 58.611 582.0 301170.0 25 0 27304.0 + -1 FYCLFKCMRFY 11 128 789.3592059473575 0 789.3604614138603 PEAK CID FTMS 0 0 0 11319 227286.453125 0.6807983139277962 1 -0.141082763671875 10 Carbamidomethyl (C) _FYC(Carbamidomethyl (C))LFKCMRFY_ REV__ENSG00000104043|ENST00000284509|ATP8B4;REV__ENST00000558906.5_1_15:50152393-50311102:-|nuORF;REV__ENST00000559726.5_1_15:50152393-50311102:-|nuORF;REV__ENST00000560161.1_1_15:50178110-50190397:-|nuORF;REV__ENST00000561385.5_1_15:50189347-50194027:-|nuORF 13.90604991867851 0.4141907700618076 3 ADQQAM[Y{I|L}]{M(Oxidation (M))|F} 9 -1 45.71 0.0 0.0 2.8991 0.0 0.0 328.16264405782755 178.05176721744377 506.21441127527135 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.0 1.2302046884880935 ADQQAM[Y{I|L}]{M(Oxidation (M))|F} 2.8991 - 5145 + 1 1.418 122407.1 1.0 5964 5363 11319 HBL1_DMSO_200M_050219_1,11329 HBL1_DMSO_200M_050219_1,11329,FYCLFKCMRFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11330 58.621 567.0 140450.0 25 0 9910.6 -1 LMLMYYCCRQ 10 113 735.3035154456119 1468.5924779580237 2 735.8038818240166 MULTI CID FTMS 0 0 0 11319 172047.71875 1.0 0 0.0 11 2 Carbamidomethyl (C),2 Oxidation (M) _LM(Oxidation (M))LM(Oxidation (M))YYC(Carbamidomethyl (C))C(Carbamidomethyl (C))RQ_ ENSG00000135074|ENST00000257527|ADAM19;ENST00000517951.5_1_5:156822576-156936463:-|nuORF;nc|ENSG00000135074|Q9H013|ADAM19 1.844237919475145 0.7181058121064529 3 MDAS 4 -1 19.68 0.0 0.0 1.3401 0.0 0.0 582.3213026536737 479.10801111392817 1061.4293137676018 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 MDAS 1.3401 - 148 + 1 1.418 71025.9 1.0 5965 5363 11319 HBL1_DMSO_200M_050219_1,11330 HBL1_DMSO_200M_050219_1,11330,LMLMYYCCRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11331 58.63 539.0 209780.0 25 0 17579.0 + 13993 HYYQKALEL 9 137 582.8068786564712 1163.5992043797423 2 582.8061401247978 MULTI CID FTMS 0 0 0 11319 167472.234375 1.0 0 0.0 12 Unmodified _HYYQKALEL_ ENSG00000119041|ENST00000263956|GTF3C3 63.960520009940105 0.0238892913700936 3 {[WN]|[YH]}YQKA{I|L}E{I|L} 9 0 + 76.327 0.0 0.0 6.5596 6.5596 89.51 0.0 0.0 0.0 20.31413332653268 55.849373760952304 20.31413332653268 9.208187539523747 0 1.3754223615525998 1.6989700043360187 0.0 0.0 + + {[WN]|[YH]}YQKA{I|L}E{I|L};{[WN]|[YH]}Y[AG]KA{I|L}E{I|L};{[WN]|[YH]}YQRRE{I|L};HYYQKA{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}A{[YD]|[{M(Oxidation (M))|F}M]}KA{I|L}E{I|L};[{I|L}A]E{[YD]|[{M(Oxidation (M))|F}M]}KA{I|L}E{I|L};{I|L}{M(Oxidation (M))|F}{I|L}HM[YV]E{I|L};{I|L}{M(Oxidation (M))|F}{I|L}AK[DC]{I|L}E{I|L};{[WN]|[YH]}Y[AG]RRE{I|L};{I|L}{M(Oxidation (M))|F}{I|L}HM[YE]V{I|L} 6.5596;5.7682;4.888;4.8126;4.7515;4.2851;4.2402;4.2277;4.092;3.9902 +;-;-;+;-;-;-;-;-;- + 1738 1 1.418 87472.9 1.0 5966 5363 11319 HBL1_DMSO_200M_050219_1,11331 HBL1_DMSO_200M_050219_1,11331,HYYQKALEL True True HYYQKALEL 58.630172 582.806140124798 1036842.0 11319.0 ENSG00000119041|ENST00000263956|GTF3C3 6.751569747924805 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11332 58.646 800.0 69238.0 25 0 18674.0 -1 0 38 1126.111132800579 0 1126.111132800579 PEAK CID FTMS 0 0 0 -1 0 13 3 TARRE 5 -1 9.3091 0.0 0.0 0.4137 0.0 0.0 1024.6607061400148 609.2343233697874 1633.895029509802 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 TARRE 0.4137 - 11 + 1 1.418 51477.7 0.9900000095367432 5967 5363 11319 HBL1_DMSO_200M_050219_1,11332 HBL1_DMSO_200M_050219_1,11332, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11333 58.656 606.0 239030.0 25 0 16222.0 + 1994 ANYWWDMI 8 182 549.7369262576103 0 549.7369262576103 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _ANYWWDMI_ REV__ENSG00000168658|ENST00000477737|VWA3B;REV__ENST00000409460.5_1_2:98703705-98907168:+|nuORF;REV__ENST00000432242.5_1_2:98833411-98885811:+|nuORF;REV__ENST00000448638.5_1_2:98797652-98853199:+|nuORF;REV__ENST00000495571.5_1_2:98833411-98928809:+|nuORF;REV__nc|ENSG00000168658|Q502W6-5|VWA3B;REV__nc|ENSG00000168658|Q502W6-6|VWA3B;REV__nc|ENSG00000168658|Q502W6-8|VWA3B 9.347437153973935 0.5488964601725408 3 PSPY 4 -1 17.423 0.0 0.0 1.5876 0.0 0.0 161.98751271774273 488.2312089220591 650.2187216398017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PSPY 1.5876 - 104 + 1 1.418 115077.8 1.0 5968 5363 11319 HBL1_DMSO_200M_050219_1,11333 HBL1_DMSO_200M_050219_1,11333,ANYWWDMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11334 58.661 248.0 703260.0 25 0 42461.0 + 41795 VPVQNPLLS 9 167 483.785121901123 965.555690869046 2 483.7461425662041 MULTI CID FTMS 0 0 0 11319 89691.65625 0.3816007048782397 -1 0.0688934326171875 15 Unmodified _VPVQNPLLS_ REV__ENSG00000196628|ENST00000354452|TCF4;REV__ENST00000562680.5_1_18:52899738-53018213:-|nuORF;REV__nc|ENSG00000196628|P15884-10|TCF4;REV__nc|ENSG00000196628|P15884-11|TCF4;REV__nc|ENSG00000196628|P15884-12|TCF4;REV__nc|ENSG00000196628|P15884-13|TCF4;REV__nc|ENSG00000196628|P15884-14|TCF4;REV__nc|ENSG00000196628|P15884-15|TCF4;REV__nc|ENSG00000196628|P15884-16|TCF4;REV__nc|ENSG00000196628|P15884-2|TCF4;REV__nc|ENSG00000196628|P15884-4|TCF4;REV__nc|ENSG00000196628|P15884-5|TCF4;REV__nc|ENSG00000196628|P15884-6|TCF4;REV__nc|ENSG00000196628|P15884-7|TCF4;REV__nc|ENSG00000196628|P15884-8|TCF4;REV__nc|ENSG00000196628|P15884-9|TCF4;REV__nc|ENSG00000196628|P15884|TCF4 49.93300154707207 0.0405168250806675 3 [VP]QS{I|L}QP 7 -1 50.807 0.0 0.0 5.2619 0.0 0.0 0.0 213.12236456567305 213.12236456567305 31.17257863792681 0.0 0.0 0.0 0 0.6747425010840047 1.5228787452803376 1.329689690656103 0.3807196863200844 [VP]QS{I|L}QP 5.2619 - 1450 1 1.418 133744.2 1.0 5969 5363 11319 HBL1_DMSO_200M_050219_1,11334 HBL1_DMSO_200M_050219_1,11334,VPVQNPLLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11335 58.674 709.0 235950.0 25 0 25152.0 -1 0 138 869.4523803591728 0 869.4523803591728 PEAK CID FTMS 0 0 0 -1 0 16 3 {M(Oxidation (M))|F}VG{I|L}C(Carbamidomethyl (C))VPS 8 -1 40.219 0.0 0.0 2.3156 0.0 0.0 721.3664173572143 153.06746851138908 874.4338858686034 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4124379954164592 0.0 {M(Oxidation (M))|F}VG{I|L}C(Carbamidomethyl (C))VPS 2.3156 - 1987 + 1 1.418 116216.4 1.0 5970 5363 11319 HBL1_DMSO_200M_050219_1,11335 HBL1_DMSO_200M_050219_1,11335, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11336 58.684 528.0 208610.0 25 0 17224.0 + 22891 LSCRRSVGQL 10 164 559.8086908723872 0 560.2803832888603 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _LSCRRSVGQL_ REV__ENST00000562833.1_3_15:83222296-83222671:-|nuORF 15.847184025352805 0.3304572136216667 3 E{I|L}W 3 -1 8.9621 0.0 0.0 0.8019 0.0 0.0 130.15380645004922 556.2021578424436 686.3559642924929 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}W 0.8019 - 184 + 1 1.418 85863.0 1.0 5971 5363 11319 HBL1_DMSO_200M_050219_1,11336 HBL1_DMSO_200M_050219_1,11336,LSCRRSVGQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11337 58.693 559.0 320700.0 25 0 34570.0 + 8175 EPQVEFHTLIQ 11 143 670.8439876930486 1339.673422452897 2 670.8442870974541 MULTI CID FTMS 0 0 0 11319 106031.6953125 0.5132937686806643 -2 0.0857925415039062 18 Unmodified _EPQVEFHTLIQ_ REV__ENSG00000111012|ENST00000228606|CYP27B1 17.44264345198275 0.6723198055858692 3 NVDEVGGEA{I|L}GR 12 -1 84.692 0.0 0.0 6.3218 0.0 0.0 125.08072333355956 0.0 125.08072333355956 0.0 73.78423389875113 0.0 0.0 0 2.2614393726401687 0.0 1.1307196863200843 0.3996498648046139 NVDEVGGEA{I|L}GR 6.3218 - 1872 + 1 1.418 130030.8 1.0 5972 5363 11319 HBL1_DMSO_200M_050219_1,11337 HBL1_DMSO_200M_050219_1,11337,EPQVEFHTLIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11338 58.695 31.0 1972400.0 25 0 517390.0 -1 0 64 318.1964633889232 634.3783738446464 2 318.1955749392509 MULTI CID FTMS 0 0 0 11319 108224.71875 0.0067009977469481 -4 0.1487007141113281 19 3 P 1 -1 1.9897 0.0 0.0 0.31365 0.0 0.0 414.246642742887 120.0510042779906 534.2976470208775 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.31365 - 3 + 1 1.418 54714.3 1.0 5973 5363 11319 HBL1_DMSO_200M_050219_1,11338 HBL1_DMSO_200M_050219_1,11338, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11340 58.699 0.71 91404000.0 25 0 18427000.0 + 44633 YPFKPPKV 8 66 325.86048683472575 974.5596311043772 3 325.8604614138603 MULTI CID FTMS 0 0 0 11339 67589304.0 0.8762757923849851 -3 0.2268753051757812 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPP{[QV]|[N{I|L}]|[RA]|[KV]} 8 0 + 50.928 0.0 0.0 5.2257 5.2257 88.931 0.0 0.0 0.0 23.022919384477376 3.979400086720375 3.979400086720375 36.429125571355314 0 0.2614393726401688 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPP{[QV]|[N{I|L}]|[RA]|[KV]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T][KP]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.2257;1.4877;1.0912;0.78236 +;-;-;- + 179 + 1 1.405 57934.5 1.0 5974 5364 11339 HBL1_DMSO_200M_050219_1,11340 HBL1_DMSO_200M_050219_1,11340,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11341 58.7 3.9 8614900.0 25 0 1531200.0 + 21206 LPDGRIIKV 9 52 337.55025021225714 1009.6289212369716 3 337.5501281619072 MULTI CID FTMS 0 0 0 11339 9010486.0 0.0918917352237901 3 -0.232208251953125 2 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 24.881564428377168 0.2146028316269493 3 {I|L}VP 3 8 23.188 0.0 0.0 2.2966 0.0 0.0 0.0 697.3997896783811 697.3997896783811 3.688943958548375 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VP 2.2966 - 51 + 1 1.405 38313.7 1.0 5975 5364 11339 HBL1_DMSO_200M_050219_1,11341 HBL1_DMSO_200M_050219_1,11341,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11342 58.701 3.2 11753000.0 25 0 1875400.0 + -1 MCFDAFSLNCM 11 46 685.750320660136 1369.486088387072 2 685.7514526247978 MULTI CID FTMS 0 0 0 11339 15601026.0 0.5830099211299244 1 -0.06402587890625 3 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))FDAFSLNCM(Oxidation (M))_ REV__ENSG00000138039|ENST00000294954|LHCGR;REV__nc|ENSG00000138039|P22888-2|LHCGR 1.3295316138638542 0.8688751186870782 3 YMD 3 -1 24.693 0.0 0.0 1.8031 0.0 0.0 320.1556147736333 637.1764010065061 957.3320157801396 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 YMD 1.8031 - 28 + 1 1.405 38388.3 1.0 5976 5364 11339 HBL1_DMSO_200M_050219_1,11342 HBL1_DMSO_200M_050219_1,11342,MCFDAFSLNCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11343 58.702 11.0 4034500.0 25 0 666150.0 + + 26565 NVIERLQEA 9 70 536.2937825102446 1070.573012087289 2 536.2935668826103 MULTI CID FTMS 0 0 0 11339 4996117.5 1.0 0 0.0 4 Unmodified _NVLEEALQR_ ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT 26.268140514670165 0.1969607489560049 3 {[NV]|[RG]}{I|L}E 4 -1 29.693 0.0 0.0 2.7735 0.0 0.0 0.0 612.3108185069782 612.3108185069782 17.16061965483958 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 {[NV]|[RG]}{I|L}E 2.7735 + + 152 + 1 1.405 41396.0 1.0 5977 5364 11339 HBL1_DMSO_200M_050219_1,11343 HBL1_DMSO_200M_050219_1,11343,NVLEEALQR False False NVIERLQEA 58.702177 536.29356688261 38065636.0 11339.0 ENSG00000126756|ENST00000333119|UXT;;nc|ENSG00000126756|Q9UBK9-2|UXT 4.426287889480591 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11344 58.703 16.0 3969100.0 25 0 522210.0 + 21581 LPKNPDLRI 9 67 355.88565927101695 1064.6351484132508 3 355.8853027224541 MULTI CID FTMS 0 0 0 11339 3176781.5 1.0 0 0.0 5 Unmodified _LPKNPDLRI_ ENSG00000163636|ENST00000295901|PSMD6;ENST00000475036.1_1_3:64008918-64009122:-|nuORF;nc|ENSG00000163636|Q15008-4|PSMD6 18.373094154950223 0.3393451798331396 3 {I|L}PKNPD{I|L}[R{I|L}] 9 0 + 51.08 0.0 0.0 4.7979 4.7979 83.651 0.0 0.0 0.0 40.120951636962246 4.762036441594191 4.762036441594191 9.208187539523747 0 0.0 0.0 0.0 0.4247425010840047 + + {I|L}PKNPD{I|L}[R{I|L}];{I|L}PKGGPD{I|L}[R{I|L}];{I|L}PK{I|L}YY[R{I|L}];{I|L}PKYY{I|L}[R{I|L}] 4.7979;3.933;2.9937;2.9937 +;-;-;- + 109 + 1 1.405 59757.5 1.0 5978 5364 11339 HBL1_DMSO_200M_050219_1,11344 HBL1_DMSO_200M_050219_1,11344,LPKNPDLRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11345 58.705 19.0 1859000.0 25 0 118680.0 + 29586 QLTPLRGTI 9 69 499.8037299419941 997.592906950788 2 499.8035766482353 MULTI CID FTMS 0 0 0 11339 2921251.75 0.9562483694276982 3 -0.232208251953125 6 Unmodified _QLTPLRGTI_ REV__nc|ENSG00000159111|Q7Z7H8-2|MRPL10 20.453626601364224 0.2830276176381075 3 [{I|L}T]Q[VP]VQ 7 -1 36.928 0.0 0.0 3.7017 0.0 0.0 0.0 229.1195329230783 229.1195329230783 16.470544657224835 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.3494850021680094 0.5 [{I|L}T]Q[VP]VQ 3.7017 - 88 1 1.405 34825.7 1.0 5979 5364 11339 HBL1_DMSO_200M_050219_1,11345 HBL1_DMSO_200M_050219_1,11345,QLTPLRGTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11346 58.706 21.0 4411700.0 25 0 220500.0 + 19109 LDTHMYEF 8 99 528.2267944975762 1054.4390360619525 2 528.2272216677666 MULTI CID FTMS 0 0 0 11339 2047609.125 0.8447091230530183 -3 0.2268753051757812 7 Unmodified _LDTHMYEF_ REV__ENSG00000138395|ENST00000652192|CDK15;REV__ENST00000451080.5_1_2:202672326-202741280:+|nuORF;REV__nc|ENSG00000138395|Q96Q40-3|CDK15;REV__nc|ENSG00000138395|Q96Q40-4|CDK15;REV__nc|ENSG00000138395|Q96Q40-5|CDK15 19.438996006549623 0.6237395211498085 3 {I|L}{M(Oxidation (M))|F}S[{M(Oxidation (M))|F}E]YSY 8 -1 + 33.085 0.0 0.0 3.1376 3.1376 75.841 0.0 0.0 0.0 16.811544221876673 6.057743964882718 6.057743964882718 6.047575072713151 0 0.0 0.0 0.6989700043360187 0.0 {I|L}{M(Oxidation (M))|F}S[{M(Oxidation (M))|F}E]YSY;{I|L}{M(Oxidation (M))|F}SHMEEY;{I|L}QQDM[NG]SY;{I|L}DQQM[NG]SY;D{I|L}QQM[NG]SY;[{M(Oxidation (M))|F}V]T[{M(Oxidation (M))|F}E]YSY;[{M(Oxidation (M))|F}V]THMEEY;{I|L}D[WM]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[MT];[YR][YC(Carbamidomethyl (C))][KC]Y 3.1376;2.5641;1.7359;1.3426;1.1652;0.79746;0.22393;0.14949;0.11521 -;-;-;-;-;-;-;-;- 354 + 1 1.405 71095.5 1.0 5980 5364 11339 HBL1_DMSO_200M_050219_1,11346 HBL1_DMSO_200M_050219_1,11346,LDTHMYEF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11347 58.707 42.0 1318900.0 25 0 118010.0 + 26482 NTPEYMEKI 9 82 562.7682882856425 1123.5220236380849 2 562.7686645388603 MULTI CID FTMS 0 0 0 11339 1439972.625 0.9339054748087584 1 -0.06402587890625 8 Unmodified _NTPEYMEKI_ ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2 34.93206674587334 0.1032771302489716 3 {[QS]|[NT]}PEYMEK{I|L} 9 0 + 59.382 0.0 0.0 5.2853 5.2853 88.027 0.0 0.0 0.0 16.942059438411903 8.416375079047498 8.416375079047498 18.501159735598875 0 0.4247425010840047 2.0 1.055462187404089 0.0 + + {[QS]|[NT]}PEYMEK{I|L};[EP]YMEK{I|L}{[QS]|[NT]};{[QS]|[NT]}[YN]ER{I|L}{[QS]|[NT]};[EP]YMT[VG]{I|L}{[QS]|[NT]};{[QS]|[NT]}[YN]E[VG]{I|L}{[QS]|[NT]};[YQ][DN]EK{I|L}{[QS]|[NT]};[AG]Y[DN]EK{I|L}{[QS]|[NT]};[YQ][DN]TR{I|L}{[QS]|[NT]};[AG]S[YN]ER{I|L}{[QS]|[NT]};[EP]Y[RH][HA]{[QS]|[NT]} 5.2853;3.6386;2.7878;2.5511;1.9682;1.2097;1.0389;0.94176;0.83687;0.83665 +;-;-;-;-;-;-;-;-;- + 346 + 1 1.405 50566.7 1.0 5981 5364 11339 HBL1_DMSO_200M_050219_1,11347 HBL1_DMSO_200M_050219_1,11347,NTPEYMEKI True True NTPEYMEKI 58.706913 562.76866453886 35386124.0 11339.0 ENSG00000196591|ENST00000519065|HDAC2;;nc|ENSG00000196591|Q92769-3|HDAC2 5.830067316691081 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11348 58.708 43.0 453800.0 25 0 37044.0 -1 SCCCCCCRRS 10 45 704.7241763184694 1407.4337997037387 2 704.7250854372978 MULTI CID FTMS 0 0 0 11339 1029155.125 1.0 0 0.0 9 5 Carbamidomethyl (C) _SC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CRRS_ ENSG00000184261|ENST00000327876|KCNK12 0.4007161486938917 0.7247829448918255 3 V{[QG]|[NA]} 3 -1 15.458 0.0 0.0 1.0983 0.0 0.0 1105.2804432599626 0.0 1105.2804432599626 0.0 15.45757490560675 0.0 0.0 0 0.5 0.0 0.0 0.0 V{[QG]|[NA]} 1.0983 - 3 1 1.405 23180.6 1.0 5982 5364 11339 HBL1_DMSO_200M_050219_1,11348 HBL1_DMSO_200M_050219_1,11348,SCCCCCCRRS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11349 58.71 61.0 926180.0 25 0 101500.0 22181 LPQEFRERI 9 62 396.5559610234732 1186.6460536706195 3 396.5557128787041 MULTI CID FTMS 0 0 0 11339 1031468.5 1.0 0 0.0 10 Unmodified _LPQEFRERI_ ENSG00000080839|ENST00000373664|RBL1;nc|ENSG00000080839|P28749-2|RBL1 15.738622578938676 0.4106572216562794 3 {I|L}PQE 4 5 45.394 0.0 0.0 3.8254 0.0 0.0 0.0 716.3855549759064 716.3855549759064 37.94653786155799 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.4247425010840047 + {I|L}PQE 3.8254 + + 26 + 1 1.405 50843.8 1.0 5983 5364 11339 HBL1_DMSO_200M_050219_1,11349 HBL1_DMSO_200M_050219_1,11349,LPQEFRERI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11350 58.712 104.0 1992400.0 25 0 442490.0 -1 0 113 406.7550247545598 811.4954965759197 2 406.7545959353447 MULTI CID FTMS 0 0 0 11339 861456.4375 0.6647388554396705 3 -0.232208251953125 11 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV 7 -1 + 69.174 0.0 0.0 8.5242 8.5242 96.464 0.0 0.0 0.0 17.397868585481078 16.320232147054057 16.320232147054057 17.397868585481078 0 1.674742501084005 2.0 0.0 0.3252574989159953 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV;P{M(Oxidation (M))|F}KPPKV;P{M(Oxidation (M))|F}KPPVK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PPKPV;[KP]{M(Oxidation (M))|F}PKPV;[KP]P{M(Oxidation (M))|F}KPV;{[HG]|PP}K{M(Oxidation (M))|F}KPV;[KP]PK{M(Oxidation (M))|F}PV;{[HG]|PP}KK{M(Oxidation (M))|F}PV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{[HG]|PP}PV 8.5242;6.3803;5.5841;5.2265;5.2265;4.7975;4.6435;4.4911;4.3371;1.6391 -;-;-;-;-;-;-;-;-;- 347 1 1.405 163351.4 1.0 5984 5364 11339 HBL1_DMSO_200M_050219_1,11350 HBL1_DMSO_200M_050219_1,11350, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11351 58.714 82.0 1571500.0 25 0 102370.0 + 30771 RIAGIRGIQGV 11 104 380.5717007281148 1138.6932727845444 3 380.5717346072197 MULTI CID FTMS 0 0 0 11339 543483.0 0.8673896669472604 -1 0.141082763671875 12 Unmodified _RIAGIRGIQGV_ ENSG00000132294|ENST00000254624|EFR3A;nc|ENSG00000132294|Q14156-2|EFR3A;nc|ENSG00000132294|Q14156-3|EFR3A 39.94969957227396 0.2131707853268865 3 RG{I|L}QGV 6 5 49.914 0.0 0.0 4.3835 0.0 0.0 510.32896620918126 0.0 510.32896620918126 0.0 22.73509716672216 0.0 0.0 0 0.7742275032520141 0.0 0.0 1.2302046884880935 + RG{I|L}QGV 4.3835 + + 124 1 1.405 112991.5 1.0 5985 5364 11339 HBL1_DMSO_200M_050219_1,11351 HBL1_DMSO_200M_050219_1,11351,RIAGIRGIQGV False True RIAGIRGIQGV 58.713688 380.57173460722 4454899.0 11339.0 nc|ENSG00000132294|Q14156-2|EFR3A;;nc|ENSG00000132294|Q14156-3|EFR3A;;ENSG00000132294|ENST00000254624|EFR3A 5.253140290578206 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11352 58.717 144.0 1076700.0 25 0 83457.0 -1 0 129 466.2642564436159 465.2569799770159 1 466.2638122439384 MULTI CID FTMS 0 0 0 11339 553481.875 0.1448601870210182 -3 0.2268753051757812 13 3 C(Carbamidomethyl (C))TV 3 -1 24.693 0.0 0.0 5.3073 0.0 0.0 87.100224461194 0.0 87.100224461194 0.0 10.088643834802156 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 C(Carbamidomethyl (C))TV 5.3073 - 74 + 1 1.405 121659.8 1.0 5986 5364 11339 HBL1_DMSO_200M_050219_1,11352 HBL1_DMSO_200M_050219_1,11352, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11353 58.719 144.0 710640.0 25 0 97762.0 45026 YPVKKGVPMA 10 100 363.87474224975335 1088.60239734946 3 363.8746826052666 MULTI CID FTMS 0 0 0 11339 480458.6875 0.3126231811964899 -6 0.3091506958007812 14 Unmodified _YPVKKGVPMA_ ENSG00000061794|ENST00000081029|MRPS35;nc|ENSG00000061794|P82673-2|MRPS35 10.073929032068715 0.6785112666868882 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{M(Oxidation (M))|F}KGPPKV 10 5 + 40.447 0.0 0.0 3.7155 3.7155 76.134 0.0 0.0 0.0 13.7101498947667 4.948500216800937 4.948500216800937 4.948500216800937 0 0.718765315847925 1.5228787452803376 0.0 0.1989700043360188 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{M(Oxidation (M))|F}KGPPKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{M(Oxidation (M))|F}KGPPVK;[YG]P{M(Oxidation (M))|F}KGPPKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KC]TGPPKV;[YG]P{M(Oxidation (M))|F}KGPPVK;GG{I|L}{I|L}VGTPG[YR];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KC]TGPPVK;GG{I|L}{I|L}VGK{M(Oxidation (M))|F}P{[DS]|[MA]|[CV]|TT};GG{I|L}{I|L}VGK{M(Oxidation (M))|F}G{[QN]|[E{I|L}]|[KN]};[KP][{I|L}T]GTPG[YR] 3.7155;3.2609;2.4561;2.3423;2.0015;1.8955;1.8877;1.8227;1.6832;1.2751 -;-;-;-;-;-;-;-;-;- 260 + 1 1.405 94576.5 1.0 5987 5364 11339 HBL1_DMSO_200M_050219_1,11353 HBL1_DMSO_200M_050219_1,11353,YPVKKGVPMA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11354 58.722 121.0 679710.0 25 0 41249.0 + 21582 LPKNPDLRI 9 91 533.3247039328486 1064.634854932497 2 533.3242065310478 MULTI CID FTMS 0 0 0 11339 457749.71875 0.76794785626658 -1 0.141082763671875 15 Unmodified _LPKNPDLRI_ ENSG00000163636|ENST00000295901|PSMD6;ENST00000475036.1_1_3:64008918-64009122:-|nuORF;nc|ENSG00000163636|Q15008-4|PSMD6 33.4449034751529 0.1114409586740657 3 {I|L}PKN[DP]{I|L}R{I|L} 9 0 + 78.707 0.0 0.0 7.3928 7.3928 89.356 0.0 0.0 0.0 55.273561666068005 10.597718523607966 10.597718523607966 6.817496819840656 0 1.7614393726401687 1.5228787452803376 0.0 0.0 + + {I|L}PKN[DP]{I|L}R{I|L};{I|L}P{I|L}E[DP]{I|L}R{I|L};{I|L}PKGG[DP]{I|L}R{I|L};{I|L}PKYY{I|L}R{I|L};{I|L}PKN{I|L}[DP]R{I|L};{I|L}P{I|L}E{I|L}[DP]R{I|L};{I|L}PKGG{I|L}[DP]R{I|L};{I|L}PKHH{I|L}[HA]{I|L};{I|L}P{I|L}[HK]H[HA]{I|L} 7.3928;6.7525;6.5279;6.3147;6.0749;5.4346;5.21;5.162;3.0738 +;-;-;-;-;-;-;-;- + 588 + 1 1.405 71927.1 1.0 5988 5364 11339 HBL1_DMSO_200M_050219_1,11354 HBL1_DMSO_200M_050219_1,11354,LPKNPDLRI True True LPKNPDLRI 58.721969 533.324206531048 33385221.5 11339.0 nc|ENSG00000163636|Q15008-4|PSMD6;;ENSG00000163636|ENST00000295901|PSMD6;;ENST00000475036.1_1_3:64008918-64009122:-|nuORF 4.860014279683431 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11355 58.728 343.0 318420.0 25 0 9813.4 -1 0 156 585.6353661561045 1753.8842690685133 3 585.6350585818291 MULTI CID FTMS 0 0 0 11339 434679.3125 0.8232388305219385 -2 0.2099761962890625 16 3 [DV]KDVHAWK{[QD]|[EN]|[WG]|[KD]|[RS]}V{NN|[MP]|[D{I|L}]|[EV]}S 15 -1 + 53.024 0.0 0.0 3.0232 3.0232 75.333 0.0 0.0 0.0 5.754897115555231 5.754897115555231 5.754897115555231 5.754897115555231 0 1.055462187404089 0.8860566476931632 2.1861818737241734 0.0 [DV]KDVHAWK{[QD]|[EN]|[WG]|[KD]|[RS]}V{NN|[MP]|[D{I|L}]|[EV]}S;{NN|[MP]|[D{I|L}]|[EV]}S[Q{I|L}]HAWK{[QD]|[EN]|[WG]|[KD]|[RS]}V[WE];{NN|[MP]|[D{I|L}]|[EV]}SAAVHAWK{[QD]|[EN]|[WG]|[KD]|[RS]}V[WE];{[ES]|[DT]|[{I|L}C]}V[Q{I|L}]HAWK{[QD]|[EN]|[WG]|[KD]|[RS]}V[WE];[DV]T[Q{I|L}]HAWK{[QD]|[EN]|[WG]|[KD]|[RS]}V[WE];{[ES]|[DT]|[{I|L}C]}VAAVHAWK{[QD]|[EN]|[WG]|[KD]|[RS]}V[WE];[DV]KDVHAWK[QP]V[{M(Oxidation (M))|F}V]S;{[DS]|[MA]|[CV]|TT}{I|L}[Q{I|L}]HAWK{[QD]|[EN]|[WG]|[KD]|[RS]}V[WE];[DV]KDVHAWK[RV]S{NN|[MP]|[D{I|L}]|[EV]}S;{[QD]|[EN]|[WG]|[KD]|[RS]}VDVHAWK{[QD]|[EN]|[WG]|[KD]|[RS]}V{NN|[MP]|[D{I|L}]|[EV]}S 3.0232;2.6951;2.5947;2.5591;2.4967;2.4587;2.4498;2.4351;2.424;2.4176 -;-;-;-;-;-;-;-;-;- 17574 1 1.405 87003.3 1.0 5989 5364 11339 HBL1_DMSO_200M_050219_1,11355 HBL1_DMSO_200M_050219_1,11355, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11356 58.735 358.0 739080.0 25 0 119310.0 + 31524 RQIEYEYKL 9 114 621.330019930545 1240.6454869278898 2 621.3301269412041 MULTI CID FTMS 0 0 0 11339 406269.78125 0.0607532333165724 -4 0.2322235107421875 17 Unmodified _RQIEYEYKL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF 63.960520009940105 0.0238892913700936 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EYEYK{I|L} 9 0 + 71.725 0.0 0.0 5.7813 5.7813 88.857 0.0 0.0 0.0 13.187587626244117 14.97302484056646 13.187587626244117 13.187587626244117 0 1.2215141619232908 0.0 0.6139829889124311 1.079689690656103 + + {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EYEYK{I|L};{[DS]|[MA]|[CV]|TT}V[KP]YEYK{I|L};[{I|L}V][WQ]YEYK{I|L};[{I|L}T][KP]{[{M(Oxidation (M))|F}C]|[YS]}EYK{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}C]|[YS]}EYK{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EYTY[VG]{I|L};{[DS]|[MA]|[CV]|TT}V[KP]YTYR{I|L};[YK]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EYR{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EYT{M(Oxidation (M))|F}[TA]{I|L};{[DS]|[MA]|[CV]|TT}V[KP]YTY[VG]{I|L} 5.7813;4.7183;4.5125;3.9147;3.7132;3.4409;3.1201;2.6227;2.4607;2.3814 +;-;-;-;-;-;-;-;-;- + 407 1 1.405 201272.8 1.0 5990 5364 11339 HBL1_DMSO_200M_050219_1,11356 HBL1_DMSO_200M_050219_1,11356,RQIEYEYKL True True RQIEYEYKL 58.734652 621.330126941204 101429013.0 11339.0 ENST00000504788.5_1_5:126112928-126171953:+|nuORF;;chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;;ENSG00000113368|ENST00000261366|LMNB1 6.958340644836426 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11357 58.743 466.0 771410.0 25 0 70467.0 + 36563 TALKIMKV 8 246 301.86155732224904 902.5628425669472 3 301.8614684939384 MULTI CID FTMS 0 0 0 11339 358719.65625 0.0301742115095481 7 -0.5553512573242188 18 Unmodified _TALKIMKV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 49.93300154707207 0.1395624531867191 3 TA{I|L}K{I|L}MKV 8 0 + 90.131 0.0 0.0 9.9861 9.9861 86.637 0.0 0.0 0.0 33.39948061694351 2.2139587821466336 2.2139587821466336 2.2139587821466336 0 0.3252574989159953 1.6989700043360187 0.0 1.3001648626366045 + + TA{I|L}K{I|L}MKV;TA{I|L}K{I|L}MVK;TK[{I|L}A]{I|L}MKV;TK[{I|L}A]{I|L}MVK 9.9861;9.7408;4.8349;4.5896 +;-;-;- + 508 + 1 1.405 290607.1 1.0 5991 5364 11339 HBL1_DMSO_200M_050219_1,11357 HBL1_DMSO_200M_050219_1,11357,TALKIMKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11358 58.751 435.0 485020.0 25 0 59614.0 30360 RAGKVAHS 8 212 413.2379010717148 824.4612492102297 2 413.2383911013603 MULTI CID FTMS 0 0 0 11339 339758.40625 0.5099577672357427 -3 0.2268753051757812 19 Unmodified _RAGKVAHS_ ENST00000560141.2_1_15:45021411-45021504:+|nuORF 4.75600775471527 0.7954636275367004 3 V 1 7 10.379 0.0 0.0 1.2588 0.0 0.0 707.3817489434313 0.0 707.3817489434313 0.0 -0.1059464953496913 -0.1059464953496913 0.0 0 0.0 0.0 0.0 0.0 + V 1.2588 + + 76 + 1 1.405 161944.4 1.0 5992 5364 11339 HBL1_DMSO_200M_050219_1,11358 HBL1_DMSO_200M_050219_1,11358,RAGKVAHS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11359 58.759 447.0 326290.0 25 0 24475.0 + 34347 SLSQLALAV 9 164 451.2712711144008 900.5279892956016 2 451.2714416384697 MULTI CID FTMS 0 0 0 11339 313943.84375 1.0 0 0.0 20 Unmodified _SLSQLALAV_ REV__ENST00000528156.1_1_11:82783495-82784356:+|nuORF 29.081581746732265 0.1611639662936252 3 {[VA]|[{I|L}G]}E[KT]{I|L}AAV 9 -1 + 52.029 0.0 0.0 5.7776 5.7776 81.62 0.0 0.0 0.0 5.273229572710974 16.478174818886373 5.273229572710974 4.149733479708182 0 1.079689690656103 1.154901959985743 0.6549471895720984 0.0 {[VA]|[{I|L}G]}E[KT]{I|L}AAV;{[VA]|[{I|L}G]}A{[WT]|[RM]}{I|L}AAV;AAV{[WT]|[RM]}{I|L}AAV;{[DA]|[EG]}{I|L}[KT]{I|L}AAV;[TA][{I|L}A][TA]{I|L}AAV;[{I|L}A]D[KT]{I|L}AAV;[TP]T[KT]{I|L}AAV;[K{I|L}]D[TA]{I|L}AAV;[Q{I|L}]{[WT]|[RM]}{I|L}AAV;{[VA]|[{I|L}G]}[VS][TA]{I|L}AAV 5.7776;5.3168;5.192;5.06;5.0424;5.0042;4.9878;4.8627;4.621;4.5928 -;-;-;-;-;-;-;-;-;- 1058 1 1.405 116293.8 1.0 5993 5364 11339 HBL1_DMSO_200M_050219_1,11359 HBL1_DMSO_200M_050219_1,11359,SLSQLALAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11361 58.763 2.4 22128000.0 25 0 2126500.0 + 44647 YPFKPPKV 8 59 488.2869567505858 974.5593605679716 2 488.2869445681572 MULTI CID FTMS 0 0 0 11360 33934320.0 1.0 0 0.0 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 61.329 0.0 0.0 6.293 6.293 92.828 0.0 0.0 0.0 40.693897340162906 4.958669108970497 4.958669108970497 49.317080963825006 0 0.3807196863200844 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6.293;1.2325 +;- + 109 + 1 1.405 47521.3 1.0 5994 5365 11360 HBL1_DMSO_200M_050219_1,11361 HBL1_DMSO_200M_050219_1,11361,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11362 58.764 72.0 1911600.0 25 0 211990.0 + 21210 LPDGRIIKV 9 100 505.8216907176456 1009.6288285020912 2 505.8222534060478 MULTI CID FTMS 0 0 0 11360 1222665.25 0.0396653536857061 4 -0.3075523376464844 2 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 55.24861242081279 0.0288621114503864 3 {I|L}PDVN{I|L}{I|L}K 8 3 68.651 0.0 0.0 6.7997 0.0 0.0 0.0 114.05668054752186 114.05668054752186 39.72357194224834 0.0 0.0 0.0 0 2.2034021960761265 2.0 0.0 0.6747425010840047 {I|L}PDVN{I|L}{I|L}K 6.7997 - 354 + 1 1.405 111134.6 1.0 5995 5365 11360 HBL1_DMSO_200M_050219_1,11362 HBL1_DMSO_200M_050219_1,11362,LPDGRIIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11363 58.766 28.0 2469200.0 25 0 239280.0 + 42455 VTGFSEEGCL 10 109 521.2321210718507 1040.4496892105012 2 521.2321655154228 MULTI CID FTMS 0 0 0 11360 1878046.375 0.7480025131945202 -1 0.06402587890625 3 Unmodified _VTGFSEEGCL_ REV__nc|ENSG00000154330|Q15124-2|PGM5 15.847184025352805 0.5816416552707754 3 {[DA]|[EG]}YN 4 -1 32.708 0.0 0.0 3.1437 0.0 0.0 0.0 574.2500181502074 574.2500181502074 16.03025550412906 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2302046884880938 0.5 {[DA]|[EG]}YN 3.1437 - 203 1 1.405 59087.6 1.0 5996 5365 11360 HBL1_DMSO_200M_050219_1,11363 HBL1_DMSO_200M_050219_1,11363,VTGFSEEGCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11364 58.767 36.0 2480700.0 25 0 279110.0 + 8228 EPYPEVSRI 9 93 545.2821384926146 1088.5497240520292 2 545.2826415896416 MULTI CID FTMS 0 0 0 11360 1669113.0 0.5304550863035535 -6 0.3538093566894531 4 Unmodified _EPYPEVSRI_ ENSG00000165643|ENST00000425225|SOHLH1;nc|ENSG00000165643|Q5JUK2|SOHLH1 40.72490554402381 0.0714771638475563 3 [EP]YPEV{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 9 2 + 68.408 0.0 0.0 6.2843 6.2843 89.476 0.0 0.0 0.0 58.31932811061336 8.142492736872597 8.142492736872597 9.542425094393252 0 0.8807196863200843 1.3979400086720375 0.7742275032520141 0.5994850021680094 [EP]YPEV{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[EP]YPE{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]};[EP]Y{I|L}[DP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[EP]Y{I|L}[EP]V{[QD]|[EN]|[WG]|[KD]|[RS]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR]{I|L}Y[HA] 6.2843;5.4077;4.2407;3.3641;2.1317 -;-;-;-;- 409 + 1 1.405 78096.2 1.0 5997 5365 11360 HBL1_DMSO_200M_050219_1,11364 HBL1_DMSO_200M_050219_1,11364,EPYPEVSRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11365 58.768 47.0 1234600.0 25 0 123170.0 + 36510 TAFESIKSV 9 98 491.26691236005234 980.5192717869048 2 491.2664062380791 MULTI CID FTMS 0 0 0 11360 1191048.0 0.9075218413645652 1 -0.114349365234375 5 Unmodified _TAFESIKSV_ chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1 34.93206674587334 0.1032771302489716 3 [TA]{M(Oxidation (M))|F}ES{I|L}KSV 9 0 + 67.953 0.0 0.0 6.9303 6.9303 93.166 0.0 0.0 0.0 46.58539067949008 7.573166222047135 7.573166222047135 16.994784489444967 0 0.7059771852360797 2.0 0.7614393726401688 0.0 + + [TA]{M(Oxidation (M))|F}ES{I|L}KSV;[TA]{M(Oxidation (M))|F}E[RK]MV;[{M(Oxidation (M))|F}T][RK]E{M(Oxidation (M))|F}[PG];[TA]{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{[WT]|[RM]}SV;[K{I|L}]SSV{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PG];[TA][YR]{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[PG];[TA][{I|L}A]T[VS][YR];[K{I|L}]SSVE[YR];{[YC]|[HE]}[KP]{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[PG] 6.9303;5.1971;3.1952;2.6652;2.367;2.054;0.60222;0.41842;0.027219 +;-;-;-;-;-;-;-;- + 252 + 1 1.405 47981.6 1.0 5998 5365 11360 HBL1_DMSO_200M_050219_1,11365 HBL1_DMSO_200M_050219_1,11365,TAFESIKSV True True TAFESIKSV 58.767975 491.266406238079 31856286.0 11360.0 ENSG00000153201|ENST00000283195|RANBP2;;ENSG00000153165|ENST00000409886|RGPD3;;nc|ENSG00000183054|Q99666-2|RGPD5;;ENSG00000169629|ENST00000302558|RGPD8;;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;;ENSG00000015568|ENST00000016946|RGPD5;;ENSG00000185304|ENST00000398146|RGPD2;;ENSG00000187627|ENST00000641458|RGPD1;;ENSG00000183054|ENST00000329516|RGPD6;;ENSG00000196862|ENST00000408999|RGPD4;;nc|ENSG00000187627|P0DJD0|RGPD1 6.983778635660808 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11366 58.77 96.0 1292300.0 25 0 270100.0 + 18275 KVIESFIKA 9 135 517.8161283460782 1033.6177037589564 2 517.8152953982353 MULTI CID FTMS 0 0 0 11360 1203477.875 0.5847232000178797 1 -0.114349365234375 6 Unmodified _KVIESFIKA_ ENSG00000139687|ENST00000267163|RB1 69.33821966488729 0.021354776001734 3 KV{I|L}ES{M(Oxidation (M))|F}{I|L}AK 9 2 + 83.104 0.0 0.0 8.0401 8.0401 96.145 0.0 0.0 0.0 57.2729865125004 16.38220071240194 16.38220071240194 20.46837195977993 0 2.4049471895720984 1.0 0.0 0.6056270500406936 KV{I|L}ES{M(Oxidation (M))|F}{I|L}AK;KV{I|L}ES{M(Oxidation (M))|F}[KA]{I|L};KVV{[ET]|[MV]}{M(Oxidation (M))|F}{I|L}AK;KV{I|L}ES[K{I|L}]{[MS]|[{M(Oxidation (M))|F}A]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}VKRR;KVV{[ET]|[MV]}{M(Oxidation (M))|F}[KA]{I|L};[{I|L}P]{[YC]|[HE]}VKRR;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EVKRR;KV[RK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M{I|L};[{I|L}P][HT]VRRR 8.0401;6.0599;5.6911;3.939;3.8489;3.7109;3.6805;2.9517;2.8119;2.5755 -;-;-;-;-;-;-;-;-;- 1198 + 1 1.405 94341.3 1.0 5999 5365 11360 HBL1_DMSO_200M_050219_1,11366 HBL1_DMSO_200M_050219_1,11366,KVIESFIKA True True KVIESFIKA 58.770089 517.815295398235 38322640.0 11360.0 ENSG00000139687|ENST00000267163|RB1 6.181340217590332 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11367 58.775 269.0 793260.0 25 0 50020.0 + 21466 LPHNPGPITV 10 185 522.7954572440665 1043.5763615549329 2 522.7953979372978 MULTI CID FTMS 0 0 0 11360 897508.9375 0.9042004161673204 -3 0.2740020751953125 7 Unmodified _LPHNPGPITV_ ENSG00000133704|ENST00000256079|IPO8;nc|ENSG00000133704|O15397-2|IPO8 85.27202061508552 0.012747187882667 3 [HN]PGP{I|L}P{I|L}S{I|L} 10 6 + 73.059 0.0 0.0 7.0008 7.0008 80.357 0.0 0.0 0.0 5.245911406049899 13.037275116073332 5.245911406049899 0.9640156839957824 0 1.0010912013506126 0.6989700043360187 0.0 0.9682886398377036 [HN]PGP{I|L}P{I|L}S{I|L};[HN]P{I|L}PGP{I|L}S{I|L};[{I|L}P]HNPGP{I|L}S{I|L};[HN]PGPP{I|L}{I|L}S{I|L};[YQ]GGP{I|L}P{I|L}S{I|L};[HN]PGP{I|L}PTV{I|L};[YQ]G{I|L}PGP{I|L}S{I|L};[HN]P{I|L}PGPTV{I|L};[YQ]NP{I|L}P{I|L}S{I|L};[{I|L}P]HNPGPTV{I|L} 7.0008;6.9084;6.4981;6.19;5.9207;5.8818;5.8283;5.7894;5.5832;5.3791 -;-;-;-;-;-;-;-;-;- 6039 1 1.405 173376.0 1.0 6000 5365 11360 HBL1_DMSO_200M_050219_1,11367 HBL1_DMSO_200M_050219_1,11367,LPHNPGPITV True True LPHNPGPITV 58.775075 522.795397937298 21934856.0 11360.0 nc|ENSG00000133704|O15397-2|IPO8;;ENSG00000133704|ENST00000256079|IPO8 7.100045998891194 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11368 58.781 345.0 527240.0 25 0 51236.0 + 21900 LPPGAMAAV 9 109 826.4470905063155 825.4398140397154 1 826.4471923708916 MULTI CID FTMS 0 0 0 11360 697634.875 0.4782094330595099 -3 0.2740020751953125 8 Unmodified _LPPGAMAAV_ ENSG00000169710|ENST00000306749|FASN 56.04830969593885 0.0282699710924866 3 [{I|L}P]PQMAAV 8 2 + 57.912 0.0 0.0 7.0159 7.0159 81.041 0.0 0.0 0.0 16.45828234534207 4.247425010840047 4.247425010840047 1.3033376849500655 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [{I|L}P]PQMAAV;[{I|L}P]PGAMAAV;[{I|L}P]PQMAG{I|L};[{I|L}P]PGAMAG{I|L};[{I|L}P]NCP{I|L}AV;[{I|L}P]PGC(Carbamidomethyl (C)){I|L}AV;[{I|L}P]PQC(Carbamidomethyl (C)){I|L}V;[{I|L}P]PQMQ{I|L};[{I|L}P]NCP{I|L}G{I|L};[{I|L}P]PGAC(Carbamidomethyl (C)){I|L}V 7.0159;6.858;6.5338;6.3759;6.2001;6.0732;5.8747;5.7573;5.718;5.7085 -;+;-;-;-;-;-;-;-;- + 1018 1 1.405 129857.6 1.0 6001 5365 11360 HBL1_DMSO_200M_050219_1,11368 HBL1_DMSO_200M_050219_1,11368,LPPGAMAAV True True LPPGAMAAV 58.781346 826.447192370892 32760966.0 11360.0 ENSG00000169710|ENST00000306749|FASN 6.28069273630778 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11369 58.784 140.0 840330.0 25 0 102390.0 + 13938 HYIIAARAL 9 100 514.3057828117966 1026.597012690393 2 514.3059570193291 MULTI CID FTMS 0 0 0 11360 655465.75 0.4370868754724102 -3 0.2740020751953125 9 Unmodified _HYIIAARAL_ ENSG00000100029|ENST00000354694|PES1;nc|ENSG00000100029|O00541-2|PES1 23.78978130925829 0.2284941198415988 3 HY{I|L}{I|L}A 5 4 61.186 0.0 0.0 5.96 0.0 0.0 0.0 426.2484530084594 426.2484530084594 44.645781776746176 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + HY{I|L}{I|L}A 5.96 + + 118 + 1 1.405 93791.4 1.0 6002 5365 11360 HBL1_DMSO_200M_050219_1,11369 HBL1_DMSO_200M_050219_1,11369,HYIIAARAL False True HYIIAARAL 58.784183 514.305957019329 24627750.0 11360.0 ENSG00000100029|ENST00000354694|PES1;;nc|ENSG00000100029|O00541-2|PES1 3.030054489771525 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11370 58.786 97.0 758620.0 25 0 93209.0 -1 MPGAQSLQVG 10 106 502.2466054237131 1002.4786579142262 2 502.2464782595634 MULTI CID FTMS 0 0 0 11360 534705.875 1.0 0 0.0 10 Oxidation (M) _M(Oxidation (M))PGAQSLQVG_ ENST00000443868.6_1_6:24403152-24403185:+|nuORF 11.640296217721598 0.652229146672156 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KQ]{I|L}Y 6 -1 16.444 0.0 0.0 1.6403 0.0 0.0 0.0 207.04326908049492 207.04326908049492 3.6793596545024014 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KQ]{I|L}Y 1.6403 - 285 1 1.405 60323.0 1.0 6003 5365 11360 HBL1_DMSO_200M_050219_1,11370 HBL1_DMSO_200M_050219_1,11370,MPGAQSLQVG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11371 58.793 368.0 1189200.0 25 0 88384.0 + 38294 TQFGGKRPFGV 11 157 597.3254487394197 1192.6363445456393 2 597.3249999880791 MULTI CID FTMS 0 0 0 11360 534539.4375 1.0 0 0.0 11 Unmodified _TQFGGKRPFGV_ ENSG00000041357|ENST00000044462|PSMA4;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4 47.594388314883695 0.1309523012099263 3 TQ{M(Oxidation (M))|F}GGK 6 5 61.565 0.0 0.0 5.1621 0.0 0.0 0.0 571.3010103663032 571.3010103663032 20.603146414668785 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.0 1.274227503252014 + TQ{M(Oxidation (M))|F}GGK 5.1621 + + 2448 + 1 1.405 319290.9 1.0 6004 5365 11360 HBL1_DMSO_200M_050219_1,11371 HBL1_DMSO_200M_050219_1,11371,TQFGGKRPFGV False True TQFGGKRPFGV 58.792915 597.324999988079 4949236.5 11360.0 ENSG00000041357|ENST00000044462|PSMA4;;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;;nc|ENSG00000041357|P25789-2|PSMA4 6.707472006479899 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11372 58.8 414.0 535730.0 25 0 50054.0 + 38270 TPYNTPQL 8 199 467.2371304354254 932.4597079376508 2 467.2376891970634 MULTI CID FTMS 0 0 0 11360 472303.6875 0.8991952070585225 1 -0.114349365234375 12 Unmodified _TPYNTPQL_ ENSG00000165219|ENST00000297933|GAPVD1;nc|ENSG00000165219|Q14C86-3|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;nc|ENSG00000165219|Q14C86-5|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1;nc|ENSG00000165219|Q14C86|GAPVD1 50.855029805455786 0.1352255786796883 3 {[WT]|[RM]}{I|L}GPC(Carbamidomethyl (C))S{I|L} 8 6 + 32.406 0.0 0.0 3.4753 3.4753 75.475 0.0 0.0 0.0 10.675077117719582 3.191459338871532 3.191459338871532 4.77121254719663 0 0.0 0.0 1.205112052208703 0.0 {[WT]|[RM]}{I|L}GPC(Carbamidomethyl (C))S{I|L};{[WT]|[RM]}{I|L}GPC(Carbamidomethyl (C))TV;{[WT]|[RM]}{I|L}GTPC(Carbamidomethyl (C))V;{[QN]|[E{I|L}]|[KN]}PKC(Carbamidomethyl (C))TW;{[WT]|[RM]}{I|L}GP[CG]S{I|L};{[QN]|[E{I|L}]|[KN]}[KS]PC(Carbamidomethyl (C))S{I|L};{[WT]|[RM]}{I|L}GPTC(Carbamidomethyl (C))V;{[WT]|[RM]}{I|L}GTC(Carbamidomethyl (C))PV;{[WT]|[RM]}{I|L}GP[CG]TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[PS]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 3.4753;2.9636;2.9301;2.6673;2.482;2.3193;2.1805;2.1673;1.9703;1.9297 -;-;-;-;-;-;-;-;-;- 1433 + 1 1.405 170639.5 1.0 6005 5365 11360 HBL1_DMSO_200M_050219_1,11372 HBL1_DMSO_200M_050219_1,11372,TPYNTPQL False True TPYNTPQL 58.800292 467.237689197063 5504547.0 11360.0 ENSG00000165219|ENST00000297933|GAPVD1;;nc|ENSG00000165219|Q14C86-3|GAPVD1;;nc|ENSG00000165219|Q14C86-5|GAPVD1;;nc|ENSG00000165219|Q14C86-4|GAPVD1;;nc|ENSG00000165219|Q14C86-6|GAPVD1;;nc|ENSG00000165219|Q14C86|GAPVD1 1.8227052688598635 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11373 58.809 488.0 368520.0 25 0 29135.0 + 29837 QQLPEIQRV 9 169 555.8167841128932 0 555.8176757693291 PEAK CID FTMS 0 0 0 11360 278455.3125 0.8482259978821409 -3 0.2740020751953125 13 Unmodified _QQLPEIQRV_ ENSG00000163214|ENST00000457308|DHX57 36.506200033944 0.0788933506710822 3 {I|L}PE{I|L} 4 5 27.607 0.0 0.0 2.488 0.0 0.0 256.11547421958943 398.21689783267817 654.3323720522676 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {I|L}PE{I|L} 2.488 + + 182 + 1 1.405 138130.9 1.0 6006 5365 11360 HBL1_DMSO_200M_050219_1,11373 HBL1_DMSO_200M_050219_1,11373,QQLPEIQRV True True QQLPEIQRV 58.808929 555.817675769329 3959606.25 11360.0 ENSG00000163214|ENST00000457308|DHX57 5.230193297068278 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11374 58.818 512.0 143350.0 25 0 14779.0 10704 FVYFGFCYRCF 11 101 726.3149902224541 0 726.3149902224541 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _FVYFGFCYRCF_ L1PA6_dup546|chr2:49227587-49231532:-|1.156546377819926|0.2927699401366612|1.98|48.0|125|1|anti-sense 8.745405648335112 0.4618489994582195 3 EY{M(Oxidation (M))|F}ADQQA{M(Oxidation (M))|F}D 10 9 47.019 0.0 0.0 3.2436 0.0 0.0 116.06701259589984 116.05125604801016 232.11826864391 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6109243748081782 EY{M(Oxidation (M))|F}ADQQA{M(Oxidation (M))|F}D 3.2436 - 875 + 1 1.405 59868.1 1.0 6007 5365 11360 HBL1_DMSO_200M_050219_1,11374 HBL1_DMSO_200M_050219_1,11374,FVYFGFCYRCF False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 11375 58.827 507.0 165460.0 25 0 8702.4 1148 AGVVLEMIRE 10 146 558.8070609420854 1115.5995689509707 2 559.3083373904228 MULTI CID FTMS 0 0 0 11360 273763.625 0.6483350422821442 -1 0.06402587890625 15 Unmodified _AGVVLEMIRE_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 10.823927491677226 0.6659270209832991 3 {[QV]|[N{I|L}]|[RA]|[KV]}AT 4 9 26.287 0.0 0.0 2.3563 0.0 0.0 0.0 713.3643754297394 713.3643754297394 12.992584677134433 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}AT 2.3563 - 575 1 1.405 67898.4 1.0 6008 5365 11360 HBL1_DMSO_200M_050219_1,11375 HBL1_DMSO_200M_050219_1,11375,AGVVLEMIRE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11376 58.838 567.0 389720.0 25 0 22412.0 + 21117 LPAPAVEHI 9 213 473.7712475800312 0 473.7713806033134 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _LPAPAVEHI_ ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1 37.97399986684836 0.0716774499419844 3 PAP 3 6 16.176 0.0 0.0 1.7108 0.0 0.0 113.08183013090292 564.2804482810179 677.3622784119209 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 + PAP 1.7108 + + 764 + 1 1.405 168870.5 1.0 6009 5365 11360 HBL1_DMSO_200M_050219_1,11376 HBL1_DMSO_200M_050219_1,11376,LPAPAVEHI True True LPAPAVEHI 58.83801 473.771380603313 8121007.0 11360.0 ENSG00000163349|ENST00000426820|HIPK1;;nc|ENSG00000163349|Q86Z02-2|HIPK1 4.300214052200317 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11377 58.847 525.0 378720.0 25 0 66552.0 -1 0 135 877.9522582888603 0 877.9522582888603 PEAK CID FTMS 0 0 0 -1 0 17 3 {I|L}QVTYS 6 -1 37.163 0.0 0.0 2.1189 0.0 0.0 894.4440540759643 165.0677889459594 1059.5118430219238 0.0 0.0 0.0 0.0 0 0.0 0.0 2.118415180652539 0.0 {I|L}QVTYS 2.1189 - 4611 + 1 1.405 135705.4 1.0 6010 5365 11360 HBL1_DMSO_200M_050219_1,11377 HBL1_DMSO_200M_050219_1,11377, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11378 58.855 436.0 355610.0 25 0 37549.0 + 20657 LLQKLDEESL 10 134 594.3306170988182 1186.6466812644362 2 594.3295165896416 MULTI CID FTMS 0 0 0 11360 225359.390625 0.9967299271888942 1 -0.114349365234375 18 Unmodified _LLQKLDEESL_ REV__ENSG00000152620|ENST00000381937|NADK2;REV__nc|ENSG00000152620|Q4G0N4-2|NADK2 10.898955630103616 0.6646681216928481 3 {I|L}{I|L}E[KQ]VS 7 -1 31.387 0.0 0.0 2.645 0.0 0.0 0.0 386.15739757343255 386.15739757343255 20.277493323783897 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.4247425010840047 {I|L}{I|L}E[KQ]VS 2.645 - 367 + 1 1.405 116316.1 1.0 6011 5365 11360 HBL1_DMSO_200M_050219_1,11378 HBL1_DMSO_200M_050219_1,11378,LLQKLDEESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11379 58.864 479.0 773710.0 25 0 50296.0 + 30525 RIPDGVVSV 9 237 471.2746310754631 0 471.2749816775322 PEAK CID FTMS 0 0 0 11360 205583.125 0.50818075020903 4 -0.3075523376464844 19 Unmodified _RELAPAVSV_ nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1 27.628801355627647 0.1319135480000405 3 SVQKV{M(Oxidation (M))|F} 6 8 16.961 0.0 0.0 1.8033 0.0 0.0 117.08220785229489 132.04604517154533 249.12825302384024 0.0 0.0 0.0 0.0 0 1.075257498915995 0.0 0.0 0.0 SVQKV{M(Oxidation (M))|F} 1.8033 - 1530 + 1 1.405 278188.9 1.0 6012 5365 11360 HBL1_DMSO_200M_050219_1,11379 HBL1_DMSO_200M_050219_1,11379,RELAPAVSV False False RIPDGVVSV 58.863518 471.274981677532 7718041.0 11360.0 nc|ENSG00000171603|O94985-2|CLSTN1;;ENSG00000171603|ENST00000377298|CLSTN1 3.38409694035848 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11380 58.873 470.0 962290.0 25 0 64246.0 + 4157 DAPHPPLKI 9 251 494.2842245197363 0 494.2494384646416 PEAK CID FTMS 0 0 0 11360 51939.56640625 0.0750535841853668 11 -1.0519638061523438 20 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 66.45667989310934 0.0141522131504411 3 K{I|L}PPHP 6 7 28.061 0.0 0.0 2.8443 0.0 0.0 131.09515578437657 183.03755744242807 314.13271322680475 0.0 0.0 0.0 0.0 0 2.451163485412895 0.0 0.0 0.5044321917401079 K{I|L}PPHP 2.8443 - 1302 1 1.405 334917.0 1.0 6013 5365 11360 HBL1_DMSO_200M_050219_1,11380 HBL1_DMSO_200M_050219_1,11380,DAPHPPLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11382 58.877 0.13 413910000.0 25 0 90144000.0 + 4455 DAYALNHTL 9 78 509.25362910442976 1016.4927052756595 2 509.2543517947197 MULTI CID FTMS 0 0 0 11381 304227648.0 0.9261042543006784 -1 0.114349365234375 1 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 85.64151623876279 0.0161498729896241 3 {[DA]|[EG]}YA{I|L}NHT{I|L} 9 0 + 81.155 0.0 0.0 7.9838 7.9838 94.768 0.0 0.0 0.0 38.242272724317374 22.848044057776804 22.848044057776804 12.460762528683688 0 1.110924374808178 1.6989700043360187 1.9916440611282624 0.3252574989159953 + + {[DA]|[EG]}YA{I|L}NHT{I|L};{[DA]|[EG]}YA{I|L}GGHT{I|L};[HT]{I|L}NA{I|L}Y{[DA]|[EG]};[HT]{I|L}N{I|L}AY{[DA]|[EG]};[HN]{I|L}TA{I|L}Y{[DA]|[EG]};[HN]{I|L}AT{I|L}Y{[DA]|[EG]};[HN]{I|L}T{I|L}AY{[DA]|[EG]};[HN]T{I|L}A{I|L}Y{[DA]|[EG]};[HT]N{I|L}A{I|L}Y{[DA]|[EG]};[HT]{I|L}NAY{I|L}{[DA]|[EG]} 7.9838;6.7579;2.6176;2.4682;2.4444;2.3171;2.295;2.2711;2.1482;2.1244 +;-;-;-;-;-;-;-;-;- + 396 + 1 1.39 48017.1 1.0 6014 5366 11381 HBL1_DMSO_200M_050219_1,11382 HBL1_DMSO_200M_050219_1,11382,DAYALNHTL True True DAYALNHTL 58.877018 509.25435179472 10137296896.0 11381.0 ENSG00000110777|ENST00000393067|POU2AF1 9.537538210550943 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11383 58.878 11.0 3594800.0 25 0 228570.0 + 14182 IDGVYRCHI 9 77 538.2706603036639 1074.5267676741278 2 538.2699462771416 MULTI CID FTMS 0 0 0 11381 621313.8125 0.1852299365527784 5 -0.3769760131835937 2 Unmodified _IDGVYRCHI_ REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-1|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-4|NEB 11.640296217721598 0.521594087909532 3 [TP]SVVAV 7 -1 32.298 0.0 0.0 3.0058 0.0 0.0 0.0 418.1283051099278 418.1283051099278 22.20963206666802 0.0 0.0 0.0 0 0.2614393726401688 0.0 1.5114393726401687 0.0 [TP]SVVAV 3.0058 - 75 1 1.39 34419.7 1.0 6015 5366 11381 HBL1_DMSO_200M_050219_1,11383 HBL1_DMSO_200M_050219_1,11383,IDGVYRCHI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11384 58.881 121.0 2684500.0 25 0 183270.0 + 4485 DAYEEDDTI 9 215 535.7103000430179 1069.4060471528358 2 535.7098876833916 MULTI CID FTMS 0 0 0 11381 1991238.5 1.0 0 0.0 3 Unmodified _DAYEEDDTI_ REV__ENSG00000269058|ENST00000269881|CALR3 10.823927491677226 0.5436922275383211 3 {[DA]|[EG]}Y[WC(Carbamidomethyl (C))]DQ{I|L} 8 -1 + 32.7 0.0 0.0 3.0578 3.0578 80.822 0.0 0.0 0.0 6.910772804864038 10.974184576165342 6.910772804864038 13.069334721591655 0 0.0 1.3979400086720375 0.0 0.3807196863200844 {[DA]|[EG]}Y[WC(Carbamidomethyl (C))]DQ{I|L};{[DA]|[EG]}Y[WC(Carbamidomethyl (C))]D[AG]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[WC(Carbamidomethyl (C))]DQ{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[VS]C(Carbamidomethyl (C))DQ{I|L};{[DA]|[EG]}Y[WC(Carbamidomethyl (C))][Q{I|L}]D;{[CP]|[EA]}QDDHDQ{I|L};{[DA]|[EG]}Y[WC(Carbamidomethyl (C))]C(Carbamidomethyl (C))[VP];{[DA]|[EG]}YA[C(Carbamidomethyl (C))C][DP]R;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[VS][CG]DQ{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[WC(Carbamidomethyl (C))]D[AG]{I|L} 3.0578;1.8357;1.7172;1.3879;1.0027;0.96783;0.9048;0.90061;0.52683;0.4951 -;-;-;-;-;-;-;-;-;- 1085 1 1.39 244851.0 1.0 6016 5366 11381 HBL1_DMSO_200M_050219_1,11384 HBL1_DMSO_200M_050219_1,11384,DAYEEDDTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11385 58.882 16.0 1406800.0 25 0 95939.0 + 6520 EALAAVRFAQ 10 48 538.298036773451 0 538.2978393435478 PEAK CID FTMS 0 0 0 11381 1744906.125 0.2534354331237597 -2 0.178375244140625 4 Unmodified _EALAAVRFAQ_ REV__ENSG00000237412|ENST00000617714|PRSS56 6.723162845929126 0.3961065659209837 3 AV 2 -1 4.068 0.0 0.0 0.37857 0.0 0.0 520.2739777443645 381.17868982486567 901.4526675692302 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AV 0.37857 + + 13 + 1 1.39 25403.3 1.0 6017 5366 11381 HBL1_DMSO_200M_050219_1,11385 HBL1_DMSO_200M_050219_1,11385,EALAAVRFAQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11386 58.883 31.0 1824900.0 25 0 151900.0 + 31526 RQIEYEYKL 9 71 414.5557176555899 1240.6453235669696 3 414.5556823611259 MULTI CID FTMS 0 0 0 11381 957153.8125 0.5139581378025471 -2 0.178375244140625 5 Unmodified _RQIEYEYKL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF 32.78568957990786 0.1150597335874693 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EYEYK{I|L} 9 0 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}E + + 25.688 16.198 3.0778 2.0706 2.0706 48.887 0.0 0.0 0.0 0.0 6.480044649418097 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.2614393726401688 + + {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EYEYK{I|L} 2.0706 + + 101 + 1 1.39 56369.8 1.0 6018 5366 11381 HBL1_DMSO_200M_050219_1,11386 HBL1_DMSO_200M_050219_1,11386,RQIEYEYKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11387 58.884 20.0 864770.0 25 0 72675.0 -1 LQQYSLTV 8 45 497.26656791081297 992.518582888426 2 497.2654907107353 MULTI CID FTMS 0 0 0 11381 768496.25 0.1312159819626233 -4 0.3883514404296875 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LQQYSLTV_ ENST00000507030.5_1_4:147438197-147438233:-|nuORF 5.230669730166228 0.792582437072536 3 WW[YR] 4 -1 16.198 0.0 0.0 1.632 0.0 0.0 283.15303237129064 0.0 283.15303237129064 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 WW[YR] 1.632 - 9 1 1.39 23258.2 1.0 6019 5366 11381 HBL1_DMSO_200M_050219_1,11387 HBL1_DMSO_200M_050219_1,11387,LQQYSLTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11388 58.889 263.0 978660.0 25 0 53041.0 + 3240 AYDKVVDCE 9 199 347.8243448134401 1040.4512050405203 3 347.8239013552666 MULTI CID FTMS 0 0 0 11381 610017.0625 1.0 0 0.0 7 Unmodified _AYDKVVDCE_ REV__ENSG00000239306|ENST00000310137|RBM14;REV__nc|ENSG00000239306|Q96PK6-2|RBM14 8.593279151180031 0.6146971463335029 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[RD]AY[DP] 9 -1 + 24.305 0.0 0.0 2.336 2.336 72.698 0.0 0.0 0.0 2.9468812381085137 1.2847547453946682 1.2847547453946682 4.295054702034481 0 0.0 1.3979400086720375 0.0 0.8494850021680094 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[RD]AY[DP];{[TV]|[{I|L}S]}E[WD]Y[QT];{[TV]|[{I|L}S]}[DC][KT]Y[DP];{[ET]|[MV]}YA[RD]AC{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DC][{I|L}A]Y[QT];{NN|[MP]|[D{I|L}]|[EV]}R[MD]Y[QT];{[SA]|[TG]}[C(Carbamidomethyl (C))Q][{I|L}A]Y[QT];{[SA]|[TG]}{M(Oxidation (M))|F}[RD]AY[DP];{[TV]|[{I|L}S]}EHC[Q{I|L}][DP];{NN|[MP]|[D{I|L}]|[EV]}T[WD]Y[QT] 2.336;1.9232;1.387;1.3479;0.9899;0.89322;0.87477;0.72504;0.52959;0.47097 -;-;-;-;-;-;-;-;-;- 701 1 1.39 214149.9 1.0 6020 5366 11381 HBL1_DMSO_200M_050219_1,11388 HBL1_DMSO_200M_050219_1,11388,AYDKVVDCE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11389 58.891 86.0 1038500.0 25 0 69751.0 + 19358 LEPWVQPN 8 128 491.75184777170034 981.4891426102008 2 491.7511474490166 MULTI CID FTMS 0 0 0 11381 554369.1875 1.0 0 0.0 8 Unmodified _LEPWVQPN_ REV__ENSG00000156345|ENST00000325303|CDK20;REV__ENST00000486228.7_1_9:90582379-90585754:-|nuORF;REV__nc|ENSG00000156345|Q8IZL9-3|CDK20;REV__nc|ENSG00000156345|Q8IZL9-4|CDK20;REV__nc|ENSG00000156345|Q8IZL9-5|CDK20 16.942295170755138 0.6606234159769251 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PYP[{M(Oxidation (M))|F}T]V 8 -1 + 36.356 0.0 0.0 3.7042 3.7042 74.493 0.0 0.0 0.0 17.216920593674164 3.5706067420431964 3.5706067420431964 3.6651834146678937 0 0.2396518287104437 1.3979400086720375 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PYP[{M(Oxidation (M))|F}T]V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PYNCKV;{NN|[MP]|[D{I|L}]|[EV]}HPYPQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}P[HM][EP]{I|L};{[YC]|[HE]}VPYPQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PYGGCKV;[QP][WD]VPQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PC[YN]KV;[{M(Oxidation (M))|F}E]SVYPQ{I|L};[{M(Oxidation (M))|F}E]SYVPQ{I|L} 3.7042;3.3307;2.8885;2.8344;2.5816;2.387;2.3678;2.2938;2.2722;2.1449 -;-;-;-;-;-;-;-;-;- 1354 + 1 1.39 72993.8 1.0 6021 5366 11381 HBL1_DMSO_200M_050219_1,11389 HBL1_DMSO_200M_050219_1,11389,LEPWVQPN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11390 58.893 76.0 1110900.0 25 0 205140.0 -1 EKTLQCSCS 9 96 352.4875992518355 1054.4409683557064 3 352.4875366091728 MULTI CID FTMS 0 0 0 11381 588312.8125 1.0 0 0.0 9 Carbamidomethyl (C) _EKTLQCSC(Carbamidomethyl (C))S_ ENSG00000179213|ENST00000601727|SIGLECL1 2.498486711656943 0.8274632594916526 3 {I|L}K{I|L} 3 -1 16.198 0.0 0.0 1.5362 0.0 0.0 230.94829258627584 466.2053621881469 697.1536547744228 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}K{I|L} 1.5362 - 51 + 1 1.39 75858.7 1.0 6022 5366 11381 HBL1_DMSO_200M_050219_1,11390 HBL1_DMSO_200M_050219_1,11390,EKTLQCSCS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11391 58.898 257.0 1122900.0 25 0 155230.0 + 14071 IAPETLRV 8 142 449.7715856382424 897.5286183432848 2 449.7718078494072 MULTI CID FTMS 0 0 0 11381 559423.875 0.2530362259678991 -2 0.178375244140625 10 Unmodified _IAPETLRV_ ENSG00000136824|ENST00000374793|SMC2;nc|ENSG00000136824|O95347-2|SMC2 58.6788170122104 0.1149141431586871 3 {I|L}APET{I|L}RV 8 0 + 87.641 0.0 0.0 9.7647 9.7647 97.812 0.0 0.0 0.0 61.77689480336159 12.519024321665086 12.519024321665086 20.432802085199427 0 0.7302046884880937 2.0 0.75 0.5774509799928715 + + {I|L}APET{I|L}RV;{I|L}APET[RV]{I|L};[{I|L}A]YY{I|L}KK;{I|L}[VS][DP]{I|L}RV;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L}KK;[TP]A[SG]P{I|L}KK 9.7647;7.4881;2.2066;1.9549;0.74274;0.49812 +;-;-;-;-;- + 322 + 1 1.39 222690.5 1.0 6023 5366 11381 HBL1_DMSO_200M_050219_1,11391 HBL1_DMSO_200M_050219_1,11391,IAPETLRV True True IAPETLRV 58.897551 449.771807849407 22977240.0 11381.0 ENSG00000136824|ENST00000374793|SMC2;;nc|ENSG00000136824|O95347-2|SMC2 4.550978104273479 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11392 58.903 291.0 711390.0 25 0 95633.0 + 26813 PAPPPPPVL 9 165 442.7663833920433 883.5182138508866 2 442.7654601931572 MULTI CID FTMS 0 0 0 11381 384167.0625 0.6069510703475643 -2 0.178375244140625 11 Unmodified _PAPPPPPVL_ ENSG00000114790|ENST00000465093|ARHGEF26;nc|ENSG00000114790|Q96DR7-3|ARHGEF26;nc|ENSG00000114790|Q96DR7-4|ARHGEF26 93.76273176245871 0.0134559174279925 3 [PA]PPPPPV{I|L} 9 0 + 70.701 0.0 0.0 8.0023 8.0023 91.682 0.0 0.0 0.0 8.224955267028704 14.973024840566469 8.224955267028704 8.224955267028704 0 2.0858317385287872 1.3979400086720375 0.0 0.0 + + [PA]PPPPPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KPPPV{I|L};[YK]APPPV{I|L};[PA][YK]PPV{I|L};[YK]PAPPV{I|L};[PA]PP[YK]V{I|L};[PA]P[YK]PV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KP[RH]{I|L};[KP]YAPPV{I|L};{[DA]|[EG]}KKNPV{I|L} 8.0023;7.0713;6.192;5.6773;4.7547;4.7108;4.5758;4.517;4.2147;3.8091 +;-;-;-;-;-;-;-;-;- + 762 1 1.39 157552.0 1.0 6024 5366 11381 HBL1_DMSO_200M_050219_1,11392 HBL1_DMSO_200M_050219_1,11392,PAPPPPPVL True True PAPPPPPVL 58.902887 442.765460193157 22588352.0 11381.0 nc|ENSG00000114790|Q96DR7-4|ARHGEF26;;ENSG00000114790|ENST00000465093|ARHGEF26;;nc|ENSG00000114790|Q96DR7-3|ARHGEF26 3.221893866856893 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11393 58.905 115.0 735570.0 25 0 155950.0 -1 HVAVKCFEL 9 103 368.194404519104 1101.5613841575118 3 368.5292541384697 MULTI CID FTMS 0 0 0 11381 324696.0625 0.0257507307364036 55 -4.715976715087891 12 Carbamidomethyl (C) _HVAVKC(Carbamidomethyl (C))FEL_ ENST00000585812.5_1_17:59456443-59469483:+|nuORF;ENST00000587294.5_1_17:59445549-59469483:+|nuORF;nc|ENSG00000141376|Q9H6U6-3|BCAS3;nc|ENSG00000141376|Q9H6U6-8|BCAS3 13.042465956692816 0.4836390050082244 3 K[TA]E{I|L}{M(Oxidation (M))|F} 6 -1 29.654 0.0 0.0 2.692 0.0 0.0 394.18074233222814 0.0 394.18074233222814 0.0 15.049406363485858 0.0 0.0 0 0.0 0.0 0.0 0.9247425010840048 K[TA]E{I|L}{M(Oxidation (M))|F} 2.692 - 93 1 1.39 74348.8 1.0 6025 5366 11381 HBL1_DMSO_200M_050219_1,11393 HBL1_DMSO_200M_050219_1,11393,HVAVKCFEL False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 11394 58.911 333.0 709310.0 25 0 92203.0 + 20208 LLASCGCV 8 209 383.185447512805 764.3563420924102 2 383.1843749880791 MULTI CID FTMS 0 0 0 11381 341738.3125 0.2587427568005581 -2 0.178375244140625 13 Unmodified _LLASCGCV_ REV__ENSG00000151062|ENST00000382722|CACNA2D4;REV__nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4;REV__nc|ENSG00000151062|Q7Z3S7-5|CACNA2D4 15.768221252438446 0.6779680726941459 3 [{I|L}A]G 3 -1 27.447 0.0 0.0 3.5909 0.0 0.0 0.0 520.1903014032101 520.1903014032101 15.457574905606748 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]G 3.5909 - 124 1 1.39 183295.1 1.0 6026 5366 11381 HBL1_DMSO_200M_050219_1,11394 HBL1_DMSO_200M_050219_1,11394,LLASCGCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11395 58.917 296.0 740290.0 25 0 44512.0 + + 11641 NAPLVHATL 9 182 468.7718425097162 0 468.7717162966728 PEAK CID FTMS 0 0 0 11381 279464.3125 1.0 0 0.0 14 Unmodified _GLAQAARHL_ ENST00000428210.5_1_2:61720980-61752425:-|nuORF;ENSG00000082898|ENST00000401558|XPO1 24.67388899826682 0.1587009629985955 3 VAQAT 5 -1 14.168 0.0 0.0 1.5145 0.0 0.0 396.2239085528325 66.03574548892811 462.2596540417606 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7951140161145329 0.5484550065040282 VAQAT 1.5145 - 383 + 1 1.39 169683.2 1.0 6027 5366 11381 HBL1_DMSO_200M_050219_1,11395 HBL1_DMSO_200M_050219_1,11395,GLAQAARHL False False NAPLVHATL 58.916724 468.771716296673 0.0 11381.0 ENST00000428210.5_1_2:61720980-61752425:-|nuORF;;ENSG00000082898|ENST00000401558|XPO1 4.498095115025838 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11396 58.922 273.0 660600.0 25 0 354580.0 + 43626 YAKYFQGDLQL 11 94 673.3407631803695 0 673.3295165896416 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _YAKYFQGDLQL_ ENSG00000005882|ENST00000503176|PDK2;ENST00000512204.5_1_17:48185497-48187458:+|nuORF;nc|ENSG00000005882|Q15119-2|PDK2 13.042465956692816 0.4221659143281722 3 WYA{I|L}NQ 6 9 11.614 0.0 0.0 0.86368 0.0 0.0 328.1763369768517 238.1205080621704 566.2968450390221 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WYA{I|L}NQ 0.86368 - 155 + 1 1.39 131560.7 1.0 6028 5366 11381 HBL1_DMSO_200M_050219_1,11396 HBL1_DMSO_200M_050219_1,11396,YAKYFQGDLQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11397 58.927 272.0 220280.0 25 0 27906.0 + -1 TTMNVCHYF 9 92 566.2340468484831 0 566.2302734255791 PEAK CID FTMS 0 0 0 -1 0 16 Oxidation (M) _TTM(Oxidation (M))NVCHYF_ REV__ENSG00000153253|ENST00000283254|SCN3A;REV__nc|ENSG00000153253|Q9NY46-2|SCN3A;REV__nc|ENSG00000153253|Q9NY46-4|SCN3A;REV__nc|ENSG00000153253|Q9NY46|SCN3A 7.289230182591677 0.3433663536648894 3 N 1 -1 8.0989 0.0 0.0 0.71643 0.0 0.0 667.2773760682568 346.1033114068969 1013.3806874751538 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 N 0.71643 + + 15 + 1 1.39 53764.4 1.0 6029 5366 11381 HBL1_DMSO_200M_050219_1,11397 HBL1_DMSO_200M_050219_1,11397,TTMNVCHYF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11399 58.934 274.0 956730.0 25 0 153430.0 + 43675 YATFKKLNTIH 11 112 668.3724656800508 0 668.3361694216728 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _YATFKKLNTIH_ REV__ENSG00000146555|ENST00000404826|SDK1;REV__nc|ENSG00000146555|Q7Z5N4-3|SDK1 34.40172386719151 0.1843838221482756 3 Y{I|L}A{I|L}NE 6 -1 37.179 0.0 0.0 2.7855 0.0 0.0 522.3107139755328 106.04171167545157 628.3524256509844 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1819235388994784 1.1906140654642814 Y{I|L}A{I|L}NE 2.7855 - 752 + 1 1.39 186780.3 1.0 6030 5367 11398 HBL1_DMSO_200M_050219_1,11399 HBL1_DMSO_200M_050219_1,11399,YATFKKLNTIH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11400 58.935 9.2 3958100.0 25 0 401040.0 + -1 LGGLVMIQKD 10 57 545.3016274906183 1088.5887020480366 2 545.3019897341728 MULTI CID FTMS 0 0 0 11398 2091042.75 0.3404457387232504 -2 0.168182373046875 2 Oxidation (M) _LGGLVM(Oxidation (M))IQKD_ REV__ENSG00000174010|ENST00000328046|KLHL15 10.823927491677226 0.6659270209832991 3 {[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EV 6 -1 19.978 0.0 0.0 1.8352 0.0 0.0 0.0 371.20575891666255 371.20575891666255 7.582334120883376 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EV 1.8352 - 57 + 1 1.39 38663.3 1.0 6031 5367 11398 HBL1_DMSO_200M_050219_1,11400 HBL1_DMSO_200M_050219_1,11400,LGGLVMIQKD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11401 58.939 239.0 961730.0 25 0 181350.0 + 23967 LVSIPWKVL 9 146 352.2255770994721 1053.6549018986163 3 352.5599853396416 MULTI CID FTMS 0 0 0 11398 639047.3125 0.7347904640400093 -1 0.0538330078125 3 Unmodified _LVSIPWKVL_ ENSG00000149218|ENST00000278505|ENDOD1 33.4449034751529 0.1114409586740657 3 {I|L}V 2 7 31.454 0.0 0.0 2.9852 0.0 0.0 0.0 838.4788661635375 838.4788661635375 5.679096297772119 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + {I|L}V 2.9852 + + 176 + 1 1.39 183074.3 1.0 6032 5367 11398 HBL1_DMSO_200M_050219_1,11401 HBL1_DMSO_200M_050219_1,11401,LVSIPWKVL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11402 58.941 52.0 1029500.0 25 0 89089.0 + 4155 DAPHPPLKI 9 85 329.85865298872284 986.5541295663686 3 329.8585082888603 MULTI CID FTMS 0 0 0 11398 554087.1875 0.8533314249335702 -1 0.0538330078125 4 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 10.823927491677226 0.5436922275383211 3 {I|L} 1 8 10.379 0.0 0.0 1.052 0.0 0.0 855.4590042995702 0.0 855.4590042995702 0.0 -1.3038340782336275 -1.3038340782336275 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.052 + + 24 + 1 1.39 51277.4 1.0 6033 5367 11398 HBL1_DMSO_200M_050219_1,11402 HBL1_DMSO_200M_050219_1,11402,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11403 58.945 246.0 347280.0 25 0 57344.0 + + 11619 YPASTVQI 8 108 439.7351068281477 877.4556607230954 2 439.7340881228447 MULTI CID FTMS 0 0 0 11398 530020.4375 1.0 0 0.0 5 Unmodified _GLADVYQL_ ENST00000480992.5_1_20:2635438-2636687:+|nuORF;ENST00000484998.5_1_20:2635830-2636687:+|nuORF;ENSG00000101361|ENST00000329276|NOP56 32.116972079565 0.368454113111938 3 {[QN]|[E{I|L}]|[KN]}NVYQ{I|L} 7 -1 + 20.406 0.0 0.0 2.3255 2.3255 79.188 0.0 0.0 0.0 2.218035200300008 5.491727930838266 2.218035200300008 11.18054082491639 0 0.9419628234359578 0.0 0.0 0.5 {[QN]|[E{I|L}]|[KN]}NVYQ{I|L};{[QN]|[E{I|L}]|[KN]}[Y{M(Oxidation (M))|F}]PP{I|L};{[WT]|[RM]}[PA]YQ{I|L};{[WT]|[RM]}V[MT]Q{I|L};{[QN]|[E{I|L}]|[KN]}NVY[AG]{I|L} 2.3255;1.0513;1.0208;0.9611;0.69235 -;-;-;-;- 261 + 1 1.39 69937.4 1.0 6034 5367 11398 HBL1_DMSO_200M_050219_1,11403 HBL1_DMSO_200M_050219_1,11403,GLADVYQL False False YPASTVQI 58.945249 439.734088122845 4654175.0 11398.0 ENST00000480992.5_1_20:2635438-2636687:+|nuORF;;ENST00000484998.5_1_20:2635830-2636687:+|nuORF;;ENSG00000101361|ENST00000329276|NOP56 3.864644130071005 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11404 58.95 252.0 297820.0 25 0 23957.0 + 12231 GQVPPLQSV 9 112 462.76121324174 923.50787355028 2 462.7604553103447 MULTI CID FTMS 0 0 0 11398 420468.78125 0.2554983894962616 10 -0.9501838684082032 6 Unmodified _GQVPPLQSV_ ENSG00000106351|ENST00000300176|AGFG2 24.020572477871973 0.2255576514309169 3 [{I|L}P]QPSV 6 5 13.655 0.0 0.0 1.4786 0.0 0.0 0.0 299.13516782201754 299.13516782201754 0.1604814023403484 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 [{I|L}P]QPSV 1.4786 - 293 1 1.39 61137.1 1.0 6035 5367 11398 HBL1_DMSO_200M_050219_1,11404 HBL1_DMSO_200M_050219_1,11404,GQVPPLQSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11405 58.955 246.0 275400.0 25 0 35151.0 + 45048 YPYEYEGGHI 10 94 614.2694948301781 1226.5244367271562 2 614.2709228396416 MULTI CID FTMS 0 0 0 11398 411588.375 0.061513014046466 10 -0.9501838684082032 7 Unmodified _YPYEYEGGHI_ ENSG00000101224|ENST00000245960|CDC25B;ENSG00000164045|ENST00000302506|CDC25A;nc|ENSG00000101224|P30305-2|CDC25B;nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B;nc|ENSG00000164045|P30304-2|CDC25A 61.357469665136826 0.0330252915653943 3 YPYEYENH{I|L} 9 2 + 92.216 0.0 0.0 7.5185 7.5185 92.184 0.0 0.0 0.0 76.73184401141008 6.382805414149786 6.382805414149786 9.208187539523747 0 0.805462187404089 2.0 1.079689690656103 0.0 YPYEYENH{I|L};YPYEYEGGH{I|L};YY[KG]YEY{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{[RE]|[WV]}EY{[QN]|[E{I|L}]|[KN]};YPY[C(Carbamidomethyl (C))K][C(Carbamidomethyl (C))S]H{I|L};[YE]P{[RE]|[WV]}EY{[QN]|[E{I|L}]|[KN]};YPY[Y{M(Oxidation (M))|F}][QT][{M(Oxidation (M))|F}V];YPY[C(Carbamidomethyl (C))K][HN][{M(Oxidation (M))|F}V];[MT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QG]|[NA]}EY{[QN]|[E{I|L}]|[KN]};[MT]G[EP][C(Carbamidomethyl (C))K]Y{[QN]|[E{I|L}]|[KN]} 7.5185;6.7678;4.4157;4.2129;4.147;3.3549;3.29;3.0477;1.4098;1.154 -;+;-;-;-;-;-;-;-;- + 427 + 1 1.39 55613.4 1.0 6036 5367 11398 HBL1_DMSO_200M_050219_1,11405 HBL1_DMSO_200M_050219_1,11405,YPYEYEGGHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11406 58.959 246.0 305070.0 25 0 26983.0 + 44906 YPPPEVRNI 9 105 542.7927561788823 0 542.7916137576103 PEAK CID FTMS 0 0 0 11398 391617.125 1.0 0 0.0 8 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 15.738622578938676 0.2464439072094497 3 PPEP 4 6 23.175 0.0 0.0 2.1388 0.0 0.0 163.06123489785324 497.2842196100219 660.3454545078752 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PPEP 2.1388 - 52 + 1 1.39 68450.3 1.0 6037 5367 11398 HBL1_DMSO_200M_050219_1,11406 HBL1_DMSO_200M_050219_1,11406,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11407 58.964 261.0 389050.0 25 0 37000.0 + 21749 LPMGSIKNV 9 145 479.7732165810685 957.5318802289372 2 479.7729980349541 MULTI CID FTMS 0 0 0 11398 329912.21875 0.1312077662058855 -3 0.232208251953125 9 Unmodified _LPMGSIKNV_ ENSG00000103353|ENST00000395878|UBFD1;ENST00000563366.5_1_16:23573052-23581908:+|nuORF;ENST00000603335.1_1_4:78033720-78034596:-|nuORF 41.8396318013385 0.0653578398400075 3 {I|L}PM 3 6 43.174 0.0 0.0 4.5089 0.0 0.0 0.0 613.3329089228728 613.3329089228728 11.430600900274596 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 + {I|L}PM 4.5089 + + 904 + 1 1.39 82552.6 1.0 6038 5367 11398 HBL1_DMSO_200M_050219_1,11407 HBL1_DMSO_200M_050219_1,11407,LPMGSIKNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11408 58.969 256.0 655770.0 25 0 53437.0 43795 YERFITITL 9 138 578.3233217360329 1154.6320905388657 2 578.3228027224541 MULTI CID FTMS 0 0 0 11398 323567.15625 0.8532379353323514 -1 0.0538330078125 10 Unmodified _YERFITITL_ ENST00000520481.1_1_8:28304597-28321161:-|nuORF 29.081581746732265 0.1611639662936252 3 [{I|L}T]HN{I|L} 5 6 50.933 0.0 0.0 4.4112 0.0 0.0 0.0 573.2898413535719 573.2898413535719 14.3786250045057 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.91944517631652 0.8807196863200843 [{I|L}T]HN{I|L} 4.4112 - 665 1 1.39 123091.5 1.0 6039 5367 11398 HBL1_DMSO_200M_050219_1,11408 HBL1_DMSO_200M_050219_1,11408,YERFITITL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11409 58.975 331.0 185480.0 25 0 40954.0 -1 0 46 1126.4453248689267 3376.3141452069804 3 1126.779467761517 MULTI CID FTMS 0 0 0 11398 303285.59375 0.555635587053653 -2 0.168182373046875 11 3 {I|L}T 2 -1 14.068 0.0 0.0 0.41667 0.0 0.0 2439.8765490883125 719.2819307916624 3159.158479879975 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 {I|L}T 0.41667 - 32 + 1 1.39 56597.9 1.0 6040 5367 11398 HBL1_DMSO_200M_050219_1,11409 HBL1_DMSO_200M_050219_1,11409, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11410 58.98 273.0 454650.0 25 0 51131.0 + 38824 TVGPVQKLV 9 141 470.7949957982575 939.575438663315 2 470.7950317263603 MULTI CID FTMS 0 0 0 11398 271606.0625 0.7517140699601222 -1 0.0538330078125 12 Unmodified _TVGPVQKLV_ ENSG00000129083|ENST00000439561|COPB1 46.020951573049366 0.0490941689151868 3 {[TV]|[{I|L}S]}GPVQK{I|L}V 9 0 + 51.498 0.0 0.0 5.481 5.481 83.545 0.0 0.0 0.0 16.946895687854905 6.842467475153121 6.842467475153121 6.842467475153121 0 0.6549471895720985 2.0 0.0 0.2887254899964357 + + {[TV]|[{I|L}S]}GPVQK{I|L}V;{[TV]|[{I|L}S]}GPVQKV{I|L};{[TV]|[{I|L}S]}GPV[AG]K{I|L}V;{[TV]|[{I|L}S]}GPV[AG]KV{I|L};{[TV]|[{I|L}S]}GR[VP]RR;[KQ]PRQ[RK];{[TV]|[{I|L}S]}[RP]RRGV;[KQ]PR[AG][RK];[KQ]PQR[RK];[PG][KA]RQ[RK] 5.481;4.7528;4.501;3.7727;2.378;2.3239;2.0803;1.3309;1.3083;0.94911 +;-;-;-;-;-;-;-;-;- + 2292 + 1 1.39 96959.4 1.0 6041 5367 11398 HBL1_DMSO_200M_050219_1,11410 HBL1_DMSO_200M_050219_1,11410,TVGPVQKLV True True TVGPVQKLV 58.979805 470.79503172636 2021815.125 11398.0 ENSG00000129083|ENST00000439561|COPB1 4.060099681218465 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11411 58.986 264.0 456370.0 25 0 24477.0 -1 0 175 523.7238112222688 3136.299208534012 6 523.7225219607353 MULTI CID FTMS 0 0 0 11398 284535.1875 0.5319175933471788 1 -0.0653190612792968 13 3 TV 2 -1 16.013 0.0 0.0 0.51057 0.0 0.0 2918.171795669558 0.0 2918.171795669558 0.0 4.230233134049026 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TV 0.51057 - 445 + 1 1.39 99166.8 1.0 6042 5367 11398 HBL1_DMSO_200M_050219_1,11411 HBL1_DMSO_200M_050219_1,11411, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11412 58.992 345.0 478640.0 25 0 44925.0 + 28776 PYEVTLEI 8 159 482.2532448255654 0 482.2524902224541 PEAK CID FTMS 0 0 0 11398 210132.75 0.599096470397048 -1 0.0538330078125 14 Unmodified _PYEVTLEI_ REV__ENST00000335922.9_1_8:38297880-38325749:-|nuORF;REV__ENST00000470826.5_1_8:38281789-38325791:-|nuORF;REV__ENST00000496296.5_1_8:38281789-38325791:-|nuORF;REV__ENST00000530701.1_1_8:38279448-38315045:-|nuORF;REV__nc|ENSG00000077782|P11362-21|FGFR1 38.15118350030904 0.1572189310998713 3 E{I|L}TC(Carbamidomethyl (C))WG 6 -1 29.269 0.0 0.0 3.0409 0.0 0.0 131.09192396071495 82.06705652408436 213.1589804847993 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 1.055462187404089 0.0 E{I|L}TC(Carbamidomethyl (C))WG 3.0409 - 1138 + 1 1.39 127371.4 1.0 6043 5367 11398 HBL1_DMSO_200M_050219_1,11412 HBL1_DMSO_200M_050219_1,11412,PYEVTLEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11414 58.996 0.66 73876000.0 25 0 14423000.0 + 44634 YPFKPPKV 8 60 325.86048683472575 974.5596311043772 3 325.8603393435478 MULTI CID FTMS 0 0 0 11413 76487896.0 0.9916434658841928 1 -0.0740509033203125 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 21.74664581756881 0.5868176546531598 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 50.162 0.0 0.0 5.1471 5.1471 88.693 0.0 0.0 0.0 25.89217113138886 5.248132450575369 5.248132450575369 38.27777740498718 0 0.0 1.154901959985743 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 5.1471;1.2194 +;- + 149 + 1 1.363 45733.7 1.0 6044 5368 11413 HBL1_DMSO_200M_050219_1,11414 HBL1_DMSO_200M_050219_1,11414,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11415 58.997 4.8 8398600.0 25 0 2252800.0 -1 0 47 318.1964633889232 634.3783738446464 2 318.1960937380791 MULTI CID FTMS 0 0 0 11413 11498068.0 0.7119309585847853 1 -0.0740509033203125 2 3 M 1 -1 1.5938 0.0 0.0 0.25124 0.0 0.0 317.3506771667151 182.9676760309204 500.3183531976355 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.25124 - 1 + 1 1.363 38325.6 1.0 6045 5368 11413 HBL1_DMSO_200M_050219_1,11415 HBL1_DMSO_200M_050219_1,11415, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11416 58.999 9.8 6221200.0 25 0 1139000.0 + 31525 RQIEYEYKL 9 51 621.330019930545 1240.6454869278898 2 621.3301269412041 MULTI CID FTMS 0 0 0 11413 6687212.5 1.0 0 0.0 3 Unmodified _RQIEYEYKL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF 28.49450938151212 0.1686335738423394 3 EYEYK{I|L} 6 3 53.136 0.0 0.0 4.2829 0.0 0.0 397.2440663068375 0.0 397.2440663068375 0.0 41.14638779968488 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.0 + EYEYK{I|L} 4.2829 + + 59 1 1.363 53715.8 1.0 6046 5368 11413 HBL1_DMSO_200M_050219_1,11416 HBL1_DMSO_200M_050219_1,11416,RQIEYEYKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11417 59.0 22.0 2544400.0 25 0 215380.0 -1 0 84 466.2642564436159 465.2569799770159 1 466.2641784548759 MULTI CID FTMS 0 0 0 11413 3303267.5 0.864548541594883 1 -0.0740509033203125 4 3 TV 2 -1 24.222 0.0 0.0 5.2061 0.0 0.0 247.1296128889284 0.0 247.1296128889284 0.0 17.284700126913393 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 TV 5.2061 - 19 + 1 1.363 48803.1 1.0 6047 5368 11413 HBL1_DMSO_200M_050219_1,11417 HBL1_DMSO_200M_050219_1,11417, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11418 59.001 16.0 3256700.0 25 0 467100.0 + 21207 LPDGRIIKV 9 76 337.55025021225714 1009.6289212369716 3 337.5500060915947 MULTI CID FTMS 0 0 0 11413 2954328.5 0.0301291597685293 7 -0.704681396484375 5 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 30.7034409873982 0.1405282614900322 3 {I|L}P[MT]KPPK 8 6 40.628 0.0 0.0 4.024 0.0 0.0 0.0 114.05674158267811 114.05674158267811 -16.03286222516239 0.0 -16.03286222516239 0.0 0 0.0 1.3979400086720375 0.0 0.3054621874040891 {I|L}P[MT]KPPK 4.024 - 244 + 1 1.363 50784.3 1.0 6048 5368 11413 HBL1_DMSO_200M_050219_1,11418 HBL1_DMSO_200M_050219_1,11418,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11419 59.002 63.0 1123300.0 25 0 110050.0 + 42884 VVPAALKV 8 83 398.76847808913794 795.5224032450759 2 398.7680541872978 MULTI CID FTMS 0 0 0 11413 1513028.125 1.0 0 0.0 6 Unmodified _VVPAALKV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 23.1484247019978 0.5573009939494978 3 VVPAA{I|L}KV 8 0 + 52.7 0.0 0.0 6.6246 6.6246 93.919 0.0 0.0 0.0 30.816241904333022 8.883126090256681 8.883126090256681 52.70049184562709 0 0.3807196863200844 2.0 0.0 0.0 + + VVPAA{I|L}KV 6.6246 + + 77 + 1 1.363 60003.9 1.0 6049 5368 11413 HBL1_DMSO_200M_050219_1,11419 HBL1_DMSO_200M_050219_1,11419,VVPAALKV False True VVPAALKV 59.002405 398.768054187298 7380662.5 11413.0 ENST00000468655.1_1_19:49994004-49994437:+|nuORF;;nc|ENSG00000293056|Q6NVV1|RPL13AP3;;ENSG00000142541|ENST00000391857|RPL13A 6.200855573018392 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11420 59.004 47.0 1666100.0 25 0 208020.0 + 15078 IMKSPTWKV 9 110 363.87474224975335 1088.60239734946 3 363.8743774294853 MULTI CID FTMS 0 0 0 11413 1254351.875 0.816177298287029 -2 0.1191520690917968 7 Unmodified _IMKSPTWKV_ REV__ENSG00000095059|ENST00000210060|DHPS;REV__ENST00000595844.5_1_19:12787852-12790977:-|nuORF;REV__nc|ENSG00000095059|P49366-2|DHPS;REV__nc|ENSG00000095059|P49366-3|DHPS 8.593279151180031 0.6146971463335029 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]GYPPKV 10 -1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]GY + + 18.991 15.194 2.34 1.7445 1.7445 48.678 0.0 0.0 0.0 0.0 -0.961112852464229 -0.961112852464229 0.0 0 0.0 0.0 0.0 0.5114393726401688 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]GYPPKV 1.7445 - 126 + 1 1.363 73160.4 1.0 6050 5368 11413 HBL1_DMSO_200M_050219_1,11420 HBL1_DMSO_200M_050219_1,11420,IMKSPTWKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11421 59.007 186.0 1082900.0 25 0 127030.0 + -1 MCFDAFSLNCM 11 139 685.750320660136 1369.486088387072 2 685.7512084841728 MULTI CID FTMS 0 0 0 11413 1207733.125 0.045132954329558 5 -0.4856376647949219 8 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))FDAFSLNCM(Oxidation (M))_ REV__ENSG00000138039|ENST00000294954|LHCGR;REV__nc|ENSG00000138039|P22888-2|LHCGR 5.731851221503515 0.8481046878870278 3 VYMDASY 7 -1 50.298 0.0 0.0 3.6727 0.0 0.0 221.09114317398445 316.0433748834594 537.1345180574439 0.0 0.0 0.0 0.0 0 0.0 0.0 2.0356668758921828 0.0 VYMDASY 3.6727 - 2003 + 1 1.363 143031.0 1.0 6051 5368 11413 HBL1_DMSO_200M_050219_1,11421 HBL1_DMSO_200M_050219_1,11421,MCFDAFSLNCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11422 59.009 49.0 2763900.0 25 0 252540.0 + 39049 TVVERLVKV 9 136 521.8346471319192 1041.6547413306382 2 521.8350707888603 MULTI CID FTMS 0 0 0 11413 1087590.125 0.6540068203500435 1 -0.0740509033203125 9 Unmodified _TVVERLVKV_ ENSG00000169180|ENST00000304658|XPO6;ENST00000562408.1_1_16:28128533-28137161:-|nuORF;nc|ENSG00000169180|Q96QU8-2|XPO6 53.40400417844725 0.0329064971918313 3 VTVE 4 7 60.904 0.0 0.0 5.8469 0.0 0.0 0.0 610.4043062799436 610.4043062799436 36.479400086720375 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.25 0.0 VTVE 5.8469 - 844 + 1 1.363 109275.9 1.0 6052 5368 11413 HBL1_DMSO_200M_050219_1,11422 HBL1_DMSO_200M_050219_1,11422,TVVERLVKV True True TVVERLVKV 59.00859 521.83507078886 8410392.0 11413.0 nc|ENSG00000169180|Q96QU8-2|XPO6;;ENSG00000169180|ENST00000304658|XPO6;;ENST00000562408.1_1_16:28128533-28137161:-|nuORF 2.468112595379353 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11423 59.013 229.0 1412500.0 25 0 80210.0 + 24928 MPPLNTQRI 9 226 535.2956346903457 1068.5767164474912 2 535.2950317263603 MULTI CID FTMS 0 0 0 11413 769446.4375 1.0 0 0.0 10 Unmodified _MPPLNTQRI_ nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078-8|MEF2A 32.78568957990786 0.1150597335874693 3 MPP{I|L}N 5 4 62.325 0.0 0.0 5.8326 0.0 0.0 0.0 513.2803438775999 513.2803438775999 32.148167490521175 0.0 0.0 0.0 0 0.6139829889124311 2.0 0.0 0.2742275032520141 + MPP{I|L}N 5.8326 + + 1141 + 1 1.363 246626.5 1.0 6053 5368 11413 HBL1_DMSO_200M_050219_1,11423 HBL1_DMSO_200M_050219_1,11423,MPPLNTQRI True True MPPLNTQRI 59.012896 535.29503172636 26076294.0 11413.0 nc|ENSG00000068305|Q02078-4|MEF2A;;nc|ENSG00000068305|Q02078-5|MEF2A;;nc|ENSG00000068305|Q02078-3|MEF2A;;nc|ENSG00000068305|Q02078-6|MEF2A;;nc|ENSG00000068305|Q02078-8|MEF2A 3.881319999694824 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11424 59.015 73.0 1328500.0 25 0 100130.0 + 4158 DAPHPPLKI 9 117 494.2844992172792 0 494.2843810915947 PEAK CID FTMS 0 0 0 11413 903972.6875 1.0 0 0.0 11 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 47.74868867922204 0.0378261468855112 3 PHP 3 6 21.339 0.0 0.0 2.163 0.0 0.0 186.0603973533373 466.3057039850219 652.3661013383593 0.0 0.0 0.0 0.0 0 1.3882104921644451 0.0 0.0 0.0 + PHP 2.163 + + 159 + 1 1.363 76791.3 1.0 6054 5368 11413 HBL1_DMSO_200M_050219_1,11424 HBL1_DMSO_200M_050219_1,11424,DAPHPPLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11425 59.017 99.0 2279200.0 25 0 456370.0 -1 0 116 406.7550247545598 811.4954965759197 2 406.7535583376884 MULTI CID FTMS 0 0 0 11413 726124.0 0.5603102091477206 7 -0.704681396484375 12 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV 7 -1 + 65.912 0.0 0.0 8.1223 8.1223 94.675 0.0 0.0 0.0 11.209901698124924 11.209901698124924 11.209901698124924 11.209901698124924 0 1.6861818737241734 2.0 0.0 0.2887254899964357 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV;P{M(Oxidation (M))|F}KPPKV;P{M(Oxidation (M))|F}KPPVK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PPKPV;[KP]{M(Oxidation (M))|F}PKPV;P{M(Oxidation (M))|F}KPVPK;[KP]P{M(Oxidation (M))|F}KPV;{[HG]|PP}K{M(Oxidation (M))|F}KPV;[KP]PK{M(Oxidation (M))|F}PV;{[HG]|PP}KK{M(Oxidation (M))|F}PV 8.1223;6.7409;5.6975;4.8246;4.8246;4.7876;4.5946;4.4406;4.2882;4.1342 -;-;-;-;-;-;-;-;-;- 491 1 1.363 178604.1 1.0 6055 5368 11413 HBL1_DMSO_200M_050219_1,11425 HBL1_DMSO_200M_050219_1,11425, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11426 59.021 243.0 559890.0 25 0 40916.0 + 29387 QLANEEIAQV 10 178 557.7905848849524 1113.5666168367047 2 557.7906982302666 MULTI CID FTMS 0 0 0 11413 695829.375 1.0 0 0.0 13 Unmodified _QLANEEIAQV_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484264.1_1_4:1746256-1746676:+|nuORF 107.1870275148908 0.0044622492419181 3 [Q{I|L}]ANEE{I|L}{I|L}{[QG]|[NA]} 10 2 + 69.02 0.0 0.0 6.1981 6.1981 83.181 0.0 0.0 0.0 4.300823925249674 0.7918124604762511 0.7918124604762511 4.300823925249674 0 0.3494850021680094 1.0 1.055462187404089 2.0356668758921828 [Q{I|L}]ANEE{I|L}{I|L}{[QG]|[NA]};[AG]A{I|L}NEE{I|L}{I|L}{[QG]|[NA]};[QA]{I|L}NEE{I|L}{I|L}{[QG]|[NA]};[AG]{I|L}ANEE{I|L}{I|L}{[QG]|[NA]};[AG]VD{[NV]|[RG]}E{I|L}{I|L}{[QG]|[NA]};[{I|L}A]QNEE{I|L}{I|L}{[QG]|[NA]};[Q{I|L}]AGGEE{I|L}{I|L}{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}AQQE{I|L}{I|L}[KG];[AG]V[QA]EE{I|L}{I|L}{[QG]|[NA]};[{I|L}A]GANEE{I|L}{I|L}{[QG]|[NA]} 6.1981;5.8119;5.5746;5.5416;5.4453;5.4061;5.3751;5.2194;5.0972;5.0058 -;-;-;-;-;-;-;-;-;- 6746 1 1.363 105273.3 1.0 6056 5368 11413 HBL1_DMSO_200M_050219_1,11426 HBL1_DMSO_200M_050219_1,11426,QLANEEIAQV True True QLANEEIAQV 59.021267 557.790698230267 5042047.5 11413.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENST00000484264.1_1_4:1746256-1746676:+|nuORF 5.774102210998535 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11427 59.027 310.0 507150.0 25 0 74200.0 + 12614 GVISKVSTL 9 149 452.2780782317739 902.541603530348 2 452.2768737673759 MULTI CID FTMS 0 0 0 11413 511358.34375 0.7526357828798576 -1 0.0653190612792968 14 Unmodified _GVISKVSTL_ ENSG00000092148|ENST00000399332|HECTD1 39.94969957227396 0.0757326808254658 3 VG{I|L}SH{I|L} 6 6 66.061 0.0 0.0 7.3195 0.0 0.0 0.0 293.1618746393188 293.1618746393188 36.34553633200406 0.0 0.0 0.0 0 1.0138793319624575 2.0 0.3807196863200844 0.0 VG{I|L}SH{I|L} 7.3195 - 1070 + 1 1.363 125765.3 1.0 6057 5368 11413 HBL1_DMSO_200M_050219_1,11427 HBL1_DMSO_200M_050219_1,11427,GVISKVSTL True True GVISKVSTL 59.026907 452.276873767376 4433245.0 11413.0 ENSG00000092148|ENST00000399332|HECTD1 3.233490467071533 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11428 59.034 368.0 470200.0 25 0 77742.0 + 36564 TALKIMKV 8 144 301.86155732224904 902.5628425669472 3 301.8614990115166 MULTI CID FTMS 0 0 0 11413 454249.65625 0.0382098526440228 11 -1.0628547668457031 15 Unmodified _TALKIMKV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 29.081581746732265 0.4323690340403521 3 TA{I|L}K{I|L}MKV 8 0 + 54.017 0.0 0.0 5.9848 5.9848 91.953 0.0 0.0 0.0 37.018092737461885 9.112514008337769 9.112514008337769 54.01673640515764 0 0.1237125054200235 1.5228787452803376 0.0 0.5994850021680094 + + TA{I|L}K{I|L}MKV 5.9848 + + 167 + 1 1.363 145868.8 1.0 6058 5368 11413 HBL1_DMSO_200M_050219_1,11428 HBL1_DMSO_200M_050219_1,11428,TALKIMKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11429 59.04 334.0 526340.0 25 0 41568.0 -1 0 123 909.0597966069176 2724.1575604209524 3 909.3951904177666 MULTI CID FTMS 0 0 0 11413 465472.28125 0.2410750158255362 -3 0.2335014343261718 16 3 [YG]SAWEQQAT 10 -1 54.374 0.0 0.0 1.996 0.0 0.0 0.0 1599.6746252005023 1599.6746252005023 10.7509338653103 0.0 0.0 0.0 0 0.0 2.0 1.5813995467886794 1.0044321917401078 [YG]SAWEQQAT 1.996 - 17073 1 1.363 122202.9 1.0 6059 5368 11413 HBL1_DMSO_200M_050219_1,11429 HBL1_DMSO_200M_050219_1,11429, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11430 59.045 298.0 1168600.0 25 0 164700.0 43728 YDGDVGNYYY 10 176 614.7437374396951 1227.47292194619 2 614.7433959841728 MULTI CID FTMS 0 0 0 11413 405722.53125 0.2090651430801902 -2 0.1191520690917968 17 Unmodified _YDGDVGNYYY_ ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF 96.11092074494114 0.0088956849251946 3 YYDGDYVGNY 10 4 + 66.809 0.0 0.0 5.4428 5.4428 74.915 0.0 0.0 0.0 0.6056693613763997 11.136218907515314 0.6056693613763997 0.6056693613763997 0 0.7742275032520141 2.0 1.2753187046026266 0.3494850021680094 YYDGDYVGNY;{[YD]|[{M(Oxidation (M))|F}M]}GDYYVGNY;{[YD]|[{M(Oxidation (M))|F}M]}GDYYRNY;YYDGDVYGNY;{[YD]|[{M(Oxidation (M))|F}M]}GDYVYGNY;YYDGDVGNYY;{[YD]|[{M(Oxidation (M))|F}M]}GDYVGNYY;{[YD]|[{M(Oxidation (M))|F}M]}YGDYVGNY;{[YD]|[{M(Oxidation (M))|F}M]}YGDYRNY;{[YD]|[{M(Oxidation (M))|F}M]}GYDYVGNY 5.4428;5.3935;5.354;4.9033;4.854;4.7269;4.6776;4.6571;4.6176;4.6155 -;-;-;-;-;-;-;-;-;- 24516 1 1.363 246475.7 1.0 6060 5368 11413 HBL1_DMSO_200M_050219_1,11430 HBL1_DMSO_200M_050219_1,11430,YDGDVGNYYY True True YYYDGDVGNY 59.045048 614.743395984173 14116525.0 11413.0 ENST00000481281.5_1_1:32757770-32793222:+|nuORF;;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 6.467828750610352 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11431 59.051 351.0 419920.0 25 0 33091.0 + 9809 FPAVVKNV 8 166 437.2631055159436 872.5116580986871 2 437.2623474001884 MULTI CID FTMS 0 0 0 11413 395649.59375 0.6232922435658922 -3 0.2335014343261718 18 Unmodified _FPAVVKNV_ ENSG00000103723|ENST00000535359|AP3B2;ENSG00000132842|ENST00000255194|AP3B1;ENST00000535385.5_1_15:83357894-83378458:-|nuORF;ENST00000535513.1_1_15:83357409-83378458:-|nuORF;ENST00000561455.5_1_15:83355747-83377528:-|nuORF;nc|ENSG00000103723|Q13367-3|AP3B2;nc|ENSG00000103723|Q13367|AP3B2;nc|ENSG00000132842|O00203-3|AP3B1 63.562846038646086 0.116059504757595 3 {M(Oxidation (M))|F}PAVVKNV 8 0 + 53.097 0.0 0.0 6.0855 6.0855 89.452 0.0 0.0 0.0 25.724415326280152 10.590595668983838 10.590595668983838 11.762137858390815 0 0.6109243748081782 0.0 0.0 0.6747425010840047 + + {M(Oxidation (M))|F}PAVVKNV;{M(Oxidation (M))|F}PAVVKGGV;{M(Oxidation (M))|F}V[PA]VKNV;{M(Oxidation (M))|F}V[PA]VKGGV 6.0855;4.7375;4.7274;3.3794 +;-;-;- + 407 + 1 1.363 116247.7 1.0 6061 5368 11413 HBL1_DMSO_200M_050219_1,11431 HBL1_DMSO_200M_050219_1,11431,FPAVVKNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11432 59.058 322.0 724110.0 25 0 27032.0 + 39135 TYINHVVSV 9 185 516.2805100639754 0 516.2807494997978 PEAK CID FTMS 0 0 0 11413 375459.71875 1.0 0 0.0 19 Unmodified _TYINHVVSV_ ENSG00000101160|ENST00000217131|CTSZ 32.78568957990786 0.0971838787772021 3 VTYV{I|L} 5 7 12.189 0.0 0.0 1.1828 0.0 0.0 204.11340908572816 248.0792177789672 452.1926268646954 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 VTYV{I|L} 1.1828 - 1179 + 1 1.363 173785.6 1.0 6062 5368 11413 HBL1_DMSO_200M_050219_1,11432 HBL1_DMSO_200M_050219_1,11432,TYINHVVSV True True TYINHVVSV 59.058413 516.2786 3138401.0 11413.0 ENSG00000101160|ENST00000217131|CTSZ 4.408133347829183 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11433 59.066 435.0 352170.0 25 0 26834.0 + 12627 GVKRKFLR 8 211 335.22224866519014 0 335.2225829958916 PEAK CID FTMS 0 0 0 11413 331186.5625 1.0 0 0.0 20 Unmodified _GVKRKFLR_ REV__ENSG00000089250|ENST00000317775|NOS1;REV__nc|ENSG00000089250|P29475-2|NOS1;REV__nc|ENSG00000089250|P29475-4|NOS1;REV__nc|ENSG00000089250|P29475-5|NOS1 0.4583401331227399 0.5992596052108689 3 P 1 -1 8.3718 0.0 0.0 1.2525 0.0 0.0 334.2359574360459 234.1140078180297 568.3499652540756 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 P 1.2525 - 14 + 1 1.363 123403.4 1.0 6063 5368 11413 HBL1_DMSO_200M_050219_1,11433 HBL1_DMSO_200M_050219_1,11433,GVKRKFLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11435 59.07 2.1 45099000.0 25 0 4443700.0 + 44648 YPFKPPKV 8 70 488.2869567505858 974.5593605679716 2 488.2870361208916 MULTI CID FTMS 0 0 0 11434 18828632.0 0.5548551437011262 4 -0.4115867614746094 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 42.09456458481378 0.1992492688217789 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 70.03 0.0 0.0 7.1858 7.1858 95.489 0.0 0.0 0.0 37.17616381856693 7.7738823421749 7.7738823421749 53.54117017888562 0 0.7614393726401688 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 7.1858;1.6919;0.2403 +;-;- + 261 + 1 1.361 80186.9 1.0 6064 5369 11434 HBL1_DMSO_200M_050219_1,11435 HBL1_DMSO_200M_050219_1,11435,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11436 59.071 38.0 1825200.0 25 0 240200.0 + 13939 HYIIAARAL 9 67 514.3057828117966 1026.597012690393 2 514.3063232302666 MULTI CID FTMS 0 0 0 11434 956745.75 0.637990635649548 1 -0.130950927734375 2 Unmodified _HYIIAARAL_ ENSG00000100029|ENST00000354694|PES1;nc|ENSG00000100029|O00541-2|PES1 31.26834338654808 0.1333407332142048 3 HY{I|L}{I|L}A 5 4 61.983 0.0 0.0 6.0377 0.0 0.0 0.0 426.2489412897094 426.2489412897094 50.87327842948042 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.0 0.0 + HY{I|L}{I|L}A 6.0377 + + 50 + 1 1.361 55631.9 1.0 6065 5369 11434 HBL1_DMSO_200M_050219_1,11436 HBL1_DMSO_200M_050219_1,11436,HYIIAARAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11437 59.073 4.9 11998000.0 25 0 921280.0 8229 EPYPEVSRI 9 75 545.2821384926146 1088.5497240520292 2 545.2820312380791 MULTI CID FTMS 0 0 0 11434 1956672.625 0.6218434259167448 -2 0.1393699645996093 3 Unmodified _EPYPEVSRI_ ENSG00000165643|ENST00000425225|SOHLH1;nc|ENSG00000165643|Q5JUK2|SOHLH1 19.62595529434964 0.305431704817896 3 [{I|L}P]KTY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Q 8 7 25.322 0.0 0.0 2.3262 0.0 0.0 0.0 96.00605885111044 96.00605885111044 9.98751612060421 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.5 0.4247425010840047 [{I|L}P]KTY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Q 2.3262 - 169 1 1.361 52516.8 1.0 6066 5369 11434 HBL1_DMSO_200M_050219_1,11437 HBL1_DMSO_200M_050219_1,11437,EPYPEVSRI False True VQYNEPLKV 59.072577 545.282031238079 117497032.0 11434.0 ENSG00000148843|ENST00000369797|PDCD11 4.374573469161987 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11438 59.074 23.0 2594900.0 25 0 264120.0 + 27609 PLELGERAI 9 88 499.2873259038439 996.5600988744876 2 499.2877380251884 MULTI CID FTMS 0 0 0 11434 2058282.125 0.6172593378416877 -7 0.5815544128417969 4 Unmodified _PLELGERAI_ REV__ENSG00000130940|ENST00000377022|CASZ1;REV__ENST00000478728.2_1_1:10720866-10753946:-|nuORF;REV__ENST00000496432.6_1_1:10713095-10754402:-|nuORF;REV__nc|ENSG00000130940|Q86V15-2|CASZ1 26.88365393820708 0.1891292719743517 3 {I|L}PEPQVV{[NV]|[RG]} 9 -1 QVV{[NV]|[RG]} + + 50.745 10.726 1.9245 5.0921 5.0921 55.943 0.0 0.0 0.0 35.26084705832169 0.0 0.0 0.0 0 0.8807196863200843 1.3010299956639813 0.0 0.0 {I|L}PEPQVV{[NV]|[RG]} 5.0921 - 164 + 1 1.361 49462.8 1.0 6067 5369 11434 HBL1_DMSO_200M_050219_1,11438 HBL1_DMSO_200M_050219_1,11438,PLELGERAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11439 59.075 50.0 1907400.0 25 0 183980.0 + + 27298 IPGHPLQV 8 105 430.75303118211576 859.4915094310315 2 430.7532836794853 MULTI CID FTMS 0 0 0 11434 1027548.625 0.2226016350426632 -2 0.1393699645996093 5 Unmodified _PHLGPLVQ_ nc|ENSG00000110002|O00534-2|VWA5A 36.46614268402704 0.2934124525509074 3 [{I|L}P]HGP{I|L}QV 8 -1 + 44.753 0.0 0.0 5.2069 5.2069 73.1 0.0 0.0 0.0 2.052796481831635 16.40978057358332 2.052796481831635 0.0565842292838425 0 0.5866968715561641 0.958607314841775 0.0 0.0 [{I|L}P]HGP{I|L}QV;[{I|L}P]HGPQ{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP{I|L}QV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GPQ{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}P{I|L}QV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}PQ{I|L}V;[{I|L}P]HGP{I|L}[AG]V;[{I|L}P]GHP{I|L}QV;[{I|L}P]GHPQ{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP{I|L}[AG]V 5.2069;5.2003;4.968;4.9614;4.289;4.2824;4.1292;3.9507;3.9441;3.8904 -;-;-;-;-;-;-;-;-;- 352 1 1.361 79249.2 1.0 6068 5369 11434 HBL1_DMSO_200M_050219_1,11439 HBL1_DMSO_200M_050219_1,11439,PHLGPLVQ False False IPGHPLQV 59.075075 430.753283679485 83621568.0 11434.0 nc|ENSG00000110002|O00534-2|VWA5A 0.6205556560307741 2.0 False 8.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11440 59.077 102.0 910000.0 25 0 100530.0 + 21901 LPPGAMAAV 9 77 826.4470905063155 825.4398140397154 1 826.4473754763603 MULTI CID FTMS 0 0 0 11434 879865.75 0.6031236633288732 1 -0.130950927734375 6 Unmodified _LPPGAMAAV_ ENSG00000169710|ENST00000306749|FASN 45.7499826716795 0.0496882803020414 3 [{I|L}P][PG]AMAAV 9 0 + 54.09 0.0 0.0 6.5529 6.5529 83.253 0.0 0.0 0.0 12.636824930454011 14.704999916446797 12.636824930454011 3.4678748622465605 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + + [{I|L}P][PG]AMAAV;[{I|L}P][QP]MAAV;[{I|L}P][PG]C(Carbamidomethyl (C)){I|L}AV;[{I|L}P]{[C(Carbamidomethyl (C))G]|[NC]}P{I|L}AV;[{I|L}P][PG]AC(Carbamidomethyl (C)){I|L}V;[{I|L}P][PG]ASWV;[{I|L}P][PG]C(Carbamidomethyl (C))A{I|L}V;[{I|L}P][QP]C(Carbamidomethyl (C)){I|L}V;[{I|L}P][QP]SWV;[{I|L}P]{[C(Carbamidomethyl (C))G]|[NC]}PA{I|L}V 6.5529;6.1328;5.7681;5.5548;5.4034;5.286;5.0387;4.9916;4.8742;4.8254 +;-;-;-;-;-;-;-;-;- + 367 1 1.361 69567.2 1.0 6069 5369 11434 HBL1_DMSO_200M_050219_1,11440 HBL1_DMSO_200M_050219_1,11440,LPPGAMAAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11441 59.079 79.0 2093100.0 25 0 375600.0 + 13546 HPFHVIRI 8 133 340.20306148461736 1017.587355054052 3 340.2026244997978 MULTI CID FTMS 0 0 0 11434 741966.3125 0.1797253704354692 -2 0.1393699645996093 7 Unmodified _HPFHVIRI_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000482732.1_1_X:153628091-153628283:+|nuORF;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 44.40701690623563 0.1655546087385432 3 HP{M(Oxidation (M))|F}HV{I|L}{I|L}R 8 2 + 72.446 0.0 0.0 7.1194 7.1194 86.165 0.0 0.0 0.0 4.559771852360797 9.700367766225568 4.559771852360797 4.559771852360797 0 1.329689690656103 0.0 0.0 0.3054621874040891 HP{M(Oxidation (M))|F}HV{I|L}{I|L}R;{I|L}HMHV{I|L}{I|L}R;H{I|L}MHV{I|L}{I|L}R;HP{M(Oxidation (M))|F}H{I|L}V{I|L}R;HP{M(Oxidation (M))|F}HV{I|L}R{I|L};{I|L}HMH{I|L}V{I|L}R;{I|L}HMHV{I|L}R{I|L};H{I|L}MH{I|L}V{I|L}R;H{I|L}MHV{I|L}R{I|L};HP{M(Oxidation (M))|F}{I|L}HV{I|L}R 7.1194;6.6713;6.4495;6.3547;6.1662;5.9066;5.7181;5.6848;5.4962;5.4685 -;-;-;-;+;-;-;-;-;- + 289 + 1 1.361 137912.4 1.0 6070 5369 11434 HBL1_DMSO_200M_050219_1,11441 HBL1_DMSO_200M_050219_1,11441,HPFHVIRI False True HPFHVIRI 59.079094 340.202624499798 49263988.0 11434.0 ENST00000482732.1_1_X:153628091-153628283:+|nuORF;;ENSG00000165496|ENST00000298283|RPL10L;;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;;ENSG00000147403|ENST00000369817|RPL10;;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 5.148774862289429 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11442 59.085 296.0 1116800.0 25 0 104920.0 + 21211 LPDGRIIKV 9 167 505.8216907176456 1009.6288285020912 2 505.8222534060478 MULTI CID FTMS 0 0 0 11434 623200.0 0.0202176748025938 8 -0.8108139038085938 8 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 79.42699986076722 0.0176555798755335 3 {I|L}PDVN{I|L}{I|L}K 8 3 75.064 0.0 0.0 7.4348 0.0 0.0 0.0 114.05655847720936 114.05655847720936 35.31484147460877 0.0 0.0 0.0 0 2.291447825603967 2.0 0.2887254899964357 0.8996498648046138 {I|L}PDVN{I|L}{I|L}K 7.4348 - 884 + 1 1.361 247256.5 1.0 6071 5369 11434 HBL1_DMSO_200M_050219_1,11442 HBL1_DMSO_200M_050219_1,11442,LPDGRIIKV True True LPDGRIIKV 59.084504 505.822253406048 3010464576.0 11434.0 ENSG00000138071|ENST00000260641|ACTR2;;nc|ENSG00000138071|P61160-2|ACTR2 5.466676076253255 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11443 59.091 359.0 480180.0 25 0 31360.0 + + 12311 SGSDALRSGLTV 12 178 581.8070732072198 1161.5995934812397 2 581.8062011599541 MULTI CID FTMS 0 0 0 11434 376887.90625 0.3445301512407003 -1 0.0740509033203125 9 Unmodified _GSERTVDKATV_ nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4 65.47368725323818 0.0469305343733202 3 [SG]SDA{I|L}R{I|L}GSTV 12 -1 + 119.93 0.0 0.0 10.325 10.325 86.64 0.0 0.0 0.0 21.42667503568731 74.2346677742625 21.42667503568731 2.1040937697618745 0 3.2614393726401687 1.3979400086720375 3.3143265708843046 0.0 [SG]SDA{I|L}R{I|L}GSTV;[SG]SDA{I|L}RSG{I|L}TV;[SG]SDA{I|L}RKETV;[SG]EGS{I|L}R{I|L}GSTV;[SG]EGS{I|L}RSG{I|L}TV;[SG]SDA{I|L}RKTEV;[SG]SDA{I|L}R{I|L}T[SG]V;[SG]SDA{I|L}KRETV;[SG]EGS{I|L}RKETV;[SG]SDA{I|L}KRTEV 10.325;10.144;9.0399;8.6017;8.4206;8.3294;8.0063;7.9995;7.3166;7.289 -;-;-;-;-;-;-;-;-;- 20851 1 1.361 130303.3 1.0 6072 5369 11434 HBL1_DMSO_200M_050219_1,11443 HBL1_DMSO_200M_050219_1,11443,GSERTVDKATV False False SGSDALRSGLTV 59.090979 581.806201159954 14528036.0 11434.0 nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 7.581164677937825 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11444 59.1 513.0 976000.0 25 0 106530.0 9135 FFQRVRAL 8 324 346.2065046246899 1035.5976844742695 3 346.2065917849541 MULTI CID FTMS 0 0 0 11434 325694.15625 1.0 0 0.0 10 Unmodified _FFQRVRAL_ ENSG00000130479|ENST00000324096|MAP1S;ENST00000601097.1_1_19:17843916-17845234:+|nuORF;nc|ENSG00000130479|Q66K74-2|MAP1S 14.838274106304384 0.6917062315640577 3 [HD]S{I|L}{I|L}AS{I|L} 8 7 33.631 0.0 0.0 3.2475 0.0 0.0 0.0 196.12180691616825 196.12180691616825 5.494718957209837 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.5484550065040282 0.0 [HD]S{I|L}{I|L}AS{I|L} 3.2475 - 1436 1 1.361 394310.6 1.0 6073 5369 11434 HBL1_DMSO_200M_050219_1,11444 HBL1_DMSO_200M_050219_1,11444,FFQRVRAL False True SLLSHDPRL 59.100021 346.206591784954 1553475.0 11434.0 ENSG00000100350|ENST00000397224|FOXRED2 3.523998022079468 3.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11445 59.108 429.0 556010.0 25 0 81819.0 + 6056 DSFSEPRI 8 159 475.73265464349146 949.4507563537828 2 475.7334167361259 MULTI CID FTMS 0 0 0 11434 293379.125 0.3489603521491239 -2 0.1393699645996093 11 Unmodified _DSFSEPRI_ ENSG00000047230|ENST00000359276|CTPS2 61.357469665136826 0.1155423183535659 3 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}SE{I|L}RP 8 2 + 52.17 0.0 0.0 5.4947 5.4947 75.317 0.0 0.0 0.0 6.989700043360188 0.7585357938901254 0.7585357938901254 0.7585357938901254 0 0.6989700043360187 0.0 0.7302046884880937 0.3807196863200844 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}SE{I|L}RP;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}SEPR{I|L};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}S{I|L}ERP;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}{I|L}SERP;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}S{I|L}WPV;{[DS]|[MA]|[CV]|TT}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}{I|L}RP;{[DS]|[MA]|[CV]|TT}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}PR{I|L};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}{I|L}SWPV;{[DS]|[MA]|[CV]|TT}{I|L}{M(Oxidation (M))|F}SERP;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}S{I|L}WVP 5.4947;5.4148;3.9969;3.3581;2.6978;2.4619;2.382;2.3808;2.3049;2.2215 -;+;-;-;-;-;-;-;-;- + 437 + 1 1.361 182194.1 1.0 6074 5369 11434 HBL1_DMSO_200M_050219_1,11445 HBL1_DMSO_200M_050219_1,11445,DSFSEPRI True True DSFSEPRI 59.107665 475.733416736126 5088701.5 11434.0 ENSG00000047230|ENST00000359276|CTPS2 5.141594886779785 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11446 59.115 410.0 374100.0 25 0 43400.0 -1 LPGNWAMEGIV 11 150 601.7957458292954 1201.5769387253906 2 601.7969848513603 MULTI CID FTMS 0 0 0 11434 241311.15625 0.3968043047083492 -2 0.1393699645996093 12 Oxidation (M) _LPGNWAM(Oxidation (M))EGIV_ ENST00000564063.1_1_1:108743279-108743501:+|nuORF 29.84058131909904 0.3915366693542702 3 {I|L}PS{I|L}[HA]M[DG]YV 11 -1 + 48.919 0.0 0.0 4.0712 4.0712 82.492 0.0 0.0 0.0 35.79744831101845 9.168276204830867 9.168276204830867 10.24537215255431 0 1.25 1.6989700043360187 0.0 0.0 {I|L}PS{I|L}[HA]M[DG]YV;{I|L}PY{[QV]|[N{I|L}]|[RA]|[KV]}[HM]ESV;{[TV]|[{I|L}S]}[HD]MQP{I|L}YV;{I|L}PS{I|L}[HA]M[{M(Oxidation (M))|F}T]SV;{[DA]|[EG]}[YQ]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}YV;{[TV]|[{I|L}S]}[HD]{[QN]|[E{I|L}]|[KN]}N{I|L}YV;[Q{I|L}]Y[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]P{I|L}YV;{I|L}[{I|L}T]YQM[DG]YV;[QP][HD]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}YV;{[TV]|[{I|L}S]}[HD]MQPY{I|L}V 4.0712;3.2186;2.9352;2.7012;2.4575;2.4575;2.3803;2.2023;2.015;1.8748 -;-;-;-;-;-;-;-;-;- 1167 + 1 1.361 112855.0 1.0 6075 5369 11434 HBL1_DMSO_200M_050219_1,11446 HBL1_DMSO_200M_050219_1,11446,LPGNWAMEGIV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11447 59.124 489.0 384240.0 25 0 30593.0 -1 QCSMCAVL 8 187 456.1927673541165 910.370981775033 2 456.1924926638603 MULTI CID FTMS 0 0 0 11434 230546.71875 0.4284403888168126 1 -0.130950927734375 13 Carbamidomethyl (C) _QC(Carbamidomethyl (C))SMCAVL_ ENSG00000215262|ENST00000399881|KCNU1 12.531546534597751 0.7257836412119636 3 {[QG]|[NA]}A 3 -1 21.427 0.0 0.0 2.3536 0.0 0.0 0.0 651.2300570526298 651.2300570526298 1.249387366082999 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[QG]|[NA]}A 2.3536 - 500 1 1.361 145989.9 1.0 6076 5369 11434 HBL1_DMSO_200M_050219_1,11447 HBL1_DMSO_200M_050219_1,11447,QCSMCAVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11448 59.131 417.0 281720.0 25 0 24235.0 + 23689 LTSSQRWPQ 9 159 551.7873955743806 1101.5602382155612 2 551.7869140505791 MULTI CID FTMS 0 0 0 11434 211010.6875 0.0160137234073716 58 -4.834049224853516 14 Unmodified _LTSSQRWPQ_ ENSG00000139625|ENST00000547488|MAP3K12;ENST00000547020.1_1_12:53875694-53876159:-|nuORF;ENST00000551511.5_1_12:53874968-53876159:-|nuORF;ENST00000552365.1_1_12:53874968-53878035:-|nuORF;nc|ENSG00000139625|Q12852|MAP3K12 32.30548876998284 0.1201446275138228 3 {M(Oxidation (M))|F}{I|L}ME 4 9 42.039 0.0 0.0 3.8163 0.0 0.0 0.0 578.3067721002561 578.3067721002561 10.463023452715063 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 {M(Oxidation (M))|F}{I|L}ME 3.8163 - 2050 + 1 1.361 95562.9 1.0 6077 5369 11434 HBL1_DMSO_200M_050219_1,11448 HBL1_DMSO_200M_050219_1,11448,LTSSQRWPQ True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11449 59.142 543.0 379130.0 25 0 74914.0 + 11302 GEVKPLTV 8 204 421.7516447479731 841.4887365627462 2 421.7513915896416 MULTI CID FTMS 0 0 0 11434 201381.75 0.4251092059972955 -11 0.6807289123535156 15 Unmodified _GEVKPLTV_ REV__ENSG00000124942|ENST00000378024|AHNAK 9.347437153973935 0.7675937258251505 3 {[DA]|[EG]}V 3 -1 16.611 0.0 0.0 1.974 0.0 0.0 0.0 553.3300862249638 553.3300862249638 4.827951657656996 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 {[DA]|[EG]}V 1.974 + + 144 1 1.361 157103.0 1.0 6078 5369 11434 HBL1_DMSO_200M_050219_1,11449 HBL1_DMSO_200M_050219_1,11449,GEVKPLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11450 59.15 481.0 381480.0 25 0 40562.0 + + 27597 YQEDVGIHV 9 188 530.7428089480171 1059.471064962834 2 530.7435790896416 MULTI CID FTMS 0 0 0 11434 193313.09375 0.737672582180003 -2 0.1393699645996093 16 Unmodified _PLDSEDSAQV_ ENSG00000151461|ENST00000357604|UPF2 11.640296217721598 0.652229146672156 3 {[DA]|[EG]}{I|L} 3 -1 22.676 0.0 0.0 2.1403 0.0 0.0 0.0 757.2990529087659 757.2990529087659 6.065374126544253 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[DA]|[EG]}{I|L} 2.1403 - 1403 1 1.361 145273.8 1.0 6079 5369 11434 HBL1_DMSO_200M_050219_1,11450 HBL1_DMSO_200M_050219_1,11450,PLDSEDSAQV False False YQEDVGIHV 59.150298 530.743579089642 687800.75 11434.0 ENSG00000151461|ENST00000357604|UPF2 -0.0702035650610923 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11451 59.161 639.0 174460.0 25 0 16064.0 -1 0 117 916.7157462563572 2747.1254093692714 3 917.0516845583916 MULTI CID FTMS 0 0 0 11434 176896.75 1.0 0 0.0 17 3 [DN]SYK[YQ]GYQ 10 -1 34.836 0.0 0.0 1.2681 0.0 0.0 0.0 1497.5819030984958 1497.5819030984958 -2.908564908176821 0.0 -2.908564908176821 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.6549471895720985 [DN]SYK[YQ]GYQ 1.2681 - 8152 1 1.361 78710.5 1.0 6080 5369 11434 HBL1_DMSO_200M_050219_1,11451 HBL1_DMSO_200M_050219_1,11451, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11452 59.171 551.0 546470.0 25 0 40070.0 + 39962 VGAPKIPSV 9 196 434.2687516163106 0 434.2690612673759 PEAK CID FTMS 0 0 0 11434 150791.8125 0.4353746689241405 -1 0.0740509033203125 18 Unmodified _VGAPKIPSV_ ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6 29.081581746732265 0.1187435359889091 3 PVAEA 5 8 14.162 0.0 0.0 1.6343 0.0 0.0 314.1945889616755 82.06701074771718 396.2615997093927 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.6237125054200234 0.0 PVAEA 1.6343 - 377 + 1 1.361 231927.8 1.0 6081 5369 11434 HBL1_DMSO_200M_050219_1,11452 HBL1_DMSO_200M_050219_1,11452,VGAPKIPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11453 59.185 708.0 121220.0 25 0 14179.0 -1 0 86 985.5488159060478 0 985.5488159060478 PEAK CID FTMS 0 0 0 -1 0 19 3 {I|L}SEK{I|L} 5 -1 25.534 0.0 0.0 1.2967 0.0 0.0 1002.550240201842 393.17841516666255 1395.7286553685046 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 {I|L}SEK{I|L} 1.2967 - 639 + 1 1.361 64782.3 1.0 6082 5369 11434 HBL1_DMSO_200M_050219_1,11453 HBL1_DMSO_200M_050219_1,11453, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11454 59.197 707.0 54664.0 25 0 13118.0 -1 0 43 856.0805541872978 0 856.0805541872978 PEAK CID FTMS 0 0 0 -1 0 20 3 P 1 -1 3.4949 0.0 0.0 0.20436 0.0 0.0 1125.826073118933 484.2577303522094 1610.0838034711423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.20436 - 3 + 1 1.361 36232.5 1.0 6083 5369 11434 HBL1_DMSO_200M_050219_1,11454 HBL1_DMSO_200M_050219_1,11454, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11456 59.201 1.1 30283000.0 25 0 6088200.0 + 4456 DAYALNHTL 9 59 509.25362910442976 1016.4927052756595 2 509.2541686892509 MULTI CID FTMS 0 0 0 11455 33652764.0 0.1024429177106766 3 -0.2806358337402344 1 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 45.69961567697781 0.0497987121815769 3 {[DA]|[EG]}YA{I|L}N 6 3 42.0 0.0 0.0 4.1318 0.0 0.0 0.0 366.1786593072876 366.1786593072876 14.55640906739358 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YA{I|L}N 4.1318 + + 124 + 1 1.361 31878.2 1.0 6084 5370 11455 HBL1_DMSO_200M_050219_1,11456 HBL1_DMSO_200M_050219_1,11456,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11457 59.202 6.1 5118400.0 25 0 345300.0 38831 TVIADQFTV 9 74 497.26656791081297 992.518582888426 2 497.2666198611259 MULTI CID FTMS 0 0 0 11455 5856727.5 1.0 0 0.0 2 Unmodified _TVIADQFTV_ ENSG00000070610|ENST00000378103|GBA2;nc|ENSG00000070610|Q9HCG7-2|GBA2 15.847184025352805 0.4077185912009129 3 TV 2 7 20.355 0.0 0.0 2.0509 0.0 0.0 774.3915667524869 0.0 774.3915667524869 0.0 6.543037151259561 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 + TV 2.0509 + + 100 + 1 1.361 30916.1 1.0 6085 5370 11455 HBL1_DMSO_200M_050219_1,11457 HBL1_DMSO_200M_050219_1,11457,TVIADQFTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11458 59.204 5.1 8351200.0 25 0 602500.0 + 42085 VQYNEPLKV 9 63 545.3016274906183 1088.5887020480366 2 545.3015014529228 MULTI CID FTMS 0 0 0 11455 5367515.5 0.8738930753596484 1 -0.0528221130371093 3 Unmodified _VQYNEPLKV_ ENSG00000148843|ENST00000369797|PDCD11 13.042465956692816 0.4836390050082244 3 [{I|L}P]KTYP 6 8 21.731 0.0 0.0 1.9963 0.0 0.0 0.0 386.1732455312045 386.1732455312045 6.273816809939772 0.0 0.0 0.0 0 0.3807196863200844 0.8538719643217619 0.0 0.0 [{I|L}P]KTYP 1.9963 - 93 1 1.361 39819.2 1.0 6086 5370 11455 HBL1_DMSO_200M_050219_1,11458 HBL1_DMSO_200M_050219_1,11458,VQYNEPLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11459 59.205 10.0 4029400.0 25 0 263780.0 44732 YPIRWEVI 8 73 538.298036773451 0 538.2981445193291 PEAK CID FTMS 0 0 0 11455 4056633.75 0.5891977320302614 2 -0.2053642272949218 4 Unmodified _YPIRWEVI_ ENST00000492497.1_1_7:102956426-102956597:-|nuORF 11.640296217721598 0.5231213682848052 3 VAV 3 7 11.682 0.0 0.0 1.0872 0.0 0.0 421.2110504982707 381.1782320611938 802.3892825594645 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VAV 1.0872 - 79 + 1 1.361 38695.5 1.0 6087 5370 11455 HBL1_DMSO_200M_050219_1,11459 HBL1_DMSO_200M_050219_1,11459,YPIRWEVI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11460 59.206 31.0 3266700.0 25 0 510140.0 + 3312 AYLEAHETF 9 96 540.7537171841545 1079.492881435109 2 540.7537719607353 MULTI CID FTMS 0 0 0 11455 1526501.75 0.6349262483991683 -1 0.130950927734375 5 Unmodified _AYLEAHETF_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107 67.34385681178166 0.0221257235307089 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}TE 7 5 58.292 0.0 0.0 5.4 0.0 0.0 0.0 205.0738924615844 205.0738924615844 31.108090959712897 0.0 0.0 0.0 0 0.7742275032520141 2.0 1.4749073637206092 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}TE 5.4 - 1246 + 1 1.361 81624.1 1.0 6088 5370 11455 HBL1_DMSO_200M_050219_1,11460 HBL1_DMSO_200M_050219_1,11460,AYLEAHETF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11461 59.207 56.0 1242200.0 25 0 121720.0 + 30311 RAAEEFVNV 9 79 517.7668027006972 1033.5190524681943 2 517.7673217654228 MULTI CID FTMS 0 0 0 11455 931445.875 0.8464573270750315 -1 0.130950927734375 6 Unmodified _RAAEEFVNV_ ENSG00000132661|ENST00000254998|NXT1 24.99096001346401 0.2132109383330889 3 {[DA]|[EG]}{M(Oxidation (M))|F}[{I|L}A]WVNV 9 5 + 47.386 0.0 0.0 4.5849 4.5849 76.741 0.0 0.0 0.0 3.4678748622465605 14.71726222832956 3.4678748622465605 3.4678748622465605 0 0.4247425010840047 1.3010299956639813 0.3807196863200844 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}[{I|L}A]WVNV;[DV]{[NV]|[RG]}E{M(Oxidation (M))|F}VNV;{[DA]|[EG]}{M(Oxidation (M))|F}[{I|L}A]WVGGV;{[NV]|[RG]}[DV]E{M(Oxidation (M))|F}VNV;[DV]{[NV]|[RG]}E{M(Oxidation (M))|F}VGGV;{[SA]|[TG]}[YV]PWVNV;{[NV]|[RG]}[DV]E{M(Oxidation (M))|F}VGGV;[DV][R{M(Oxidation (M))|F}]{[DA]|[EG]}VNV;{[SA]|[TG]}[YV]PWVGGV 4.5849;4.2494;3.694;3.6669;3.3584;2.8202;2.7759;2.556;1.9292 -;-;-;-;-;-;-;-;- 239 1 1.361 57135.3 1.0 6089 5370 11455 HBL1_DMSO_200M_050219_1,11461 HBL1_DMSO_200M_050219_1,11461,RAAEEFVNV False True RAAEEFVNV 59.20731 517.767321765423 15762412.0 11455.0 ENSG00000132661|ENST00000254998|NXT1 4.85010306040446 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11462 59.208 41.0 908030.0 25 0 123210.0 + 21044 LPADIKESI 9 58 493.28213170038725 984.5497104675744 2 493.2820617556572 MULTI CID FTMS 0 0 0 11455 908799.3125 0.6812730906952047 -1 0.130950927734375 7 Unmodified _LPADIKESI_ ENSG00000165630|ENST00000378572|PRPF18 29.84058131909904 0.1515068451768857 3 {I|L}PAD{I|L} 5 4 63.443 0.0 0.0 6.4439 0.0 0.0 0.0 472.2424105279906 472.2424105279906 45.996075289514096 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + {I|L}PAD{I|L} 6.4439 + + 84 + 1 1.361 39342.6 1.0 6090 5370 11455 HBL1_DMSO_200M_050219_1,11462 HBL1_DMSO_200M_050219_1,11462,LPADIKESI False True LPADIKESI 59.208489 493.282061755657 21760740.921875 11455.0 ENSG00000165630|ENST00000378572|PRPF18 5.667074680328369 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11463 59.21 72.0 863690.0 25 0 75251.0 + 32356 RYPGYMNNDL 10 92 621.7826079338688 1241.5506629345375 2 621.7825805544853 MULTI CID FTMS 0 0 0 11455 667984.125 0.5677285801933022 -2 0.2050018310546875 8 Unmodified _RYPGYMNNDL_ ENSG00000037042|ENST00000251412|TUBG2;ENSG00000131462|ENST00000251413|TUBG1 31.26834338654808 0.266153677697784 3 [YR][PG]YMNND{I|L} 10 0 + 64.966 0.0 0.0 5.2326 5.2326 84.153 0.0 0.0 0.0 18.81991147094716 42.68614309909985 18.81991147094716 8.992336261979723 0 0.6549471895720985 1.6989700043360187 0.0 0.0 + + [YR][PG]YMNND{I|L};[YR][PG]YMN[DG]G{I|L};[YR][PG]YMGGND{I|L};[YR][PG]YMNGGD{I|L};{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}YMNND{I|L};[{M(Oxidation (M))|F}V]NNMY[PG]MG{I|L};{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}YMN[DG]G{I|L};{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}YMNGGD{I|L};{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}YMGGND{I|L};[YR][WR]EC(Carbamidomethyl (C))C(Carbamidomethyl (C)){I|L} 5.2326;4.5084;4.4945;4.4945;3.1368;2.8369;2.4125;2.3987;2.3987;2.304 +;-;-;-;-;-;-;-;-;- + 296 1 1.361 53685.3 1.0 6091 5370 11455 HBL1_DMSO_200M_050219_1,11463 HBL1_DMSO_200M_050219_1,11463,RYPGYMNNDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11464 59.212 60.0 1329000.0 25 0 216380.0 + 14005 IADLIIFPF 9 88 350.2063430724648 1047.5971998175944 3 350.2067138552666 MULTI CID FTMS 0 0 0 11455 662779.0625 0.1681426173754932 -3 0.2703208923339844 9 Unmodified _IADLIIFPF_ REV__ENSG00000119596|ENST00000325680|YLPM1;REV__nc|ENSG00000119596|P49750-1|YLPM1;REV__nc|ENSG00000119596|P49750-3|YLPM1 13.50788311687929 0.4710407108020397 3 [{I|L}A]{[CP]|[EA]}KW 6 -1 30.903 0.0 0.0 2.9499 0.0 0.0 0.0 346.20456873111567 346.20456873111567 17.408037477650637 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]{[CP]|[EA]}KW 2.9499 - 59 + 1 1.361 72590.7 1.0 6092 5370 11455 HBL1_DMSO_200M_050219_1,11464 HBL1_DMSO_200M_050219_1,11464,IADLIIFPF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11465 59.214 130.0 519140.0 25 0 63866.0 + 25220 MVAPAVASV 9 64 844.4592489125642 843.4519724459642 1 844.4605590701103 MULTI CID FTMS 0 0 0 11455 642775.125 0.5860072143762395 2 -0.2053642272949218 10 Unmodified _MVAPAVASV_ ENSG00000177606|ENST00000371222|JUN 74.39630413441286 0.0193995060682538 3 [PA]VAMVASV 9 4 + 59.104 0.0 0.0 7.0074 7.0074 83.775 0.0 0.0 0.0 5.642492736872597 42.80053682550154 5.642492736872597 3.0102999566398125 0 0.3252574989159953 0.0 0.4247425010840047 0.0 [PA]VAMVASV;[PA]AVMVASV;[PA]VAMAVSV;[PA]VMAVASV;{[ET]|[MV]}APAVASV;[PA]AVMAVSV;[PA]VAMASVV;{[ET]|[MV]}APAAVSV;[PA]VMAAVSV;[PA]VAAMVSV 7.0074;6.6505;6.5356;6.4417;6.2064;6.1787;6.0492;6.0446;5.9699;5.7931 -;-;-;-;+;-;-;-;-;- + 1203 1 1.361 51254.1 1.0 6093 5370 11455 HBL1_DMSO_200M_050219_1,11465 HBL1_DMSO_200M_050219_1,11465,MVAPAVASV True True MVAPAVASV 59.214349 844.46055907011 9665900.0 11455.0 ENSG00000177606|ENST00000371222|JUN 5.9227878252665205 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11466 59.217 130.0 491980.0 25 0 73960.0 + -1 ALGLAAMC 8 90 383.185447512805 764.3563420924102 2 383.1850463747978 MULTI CID FTMS 0 0 0 11455 627028.5 0.4747465436217918 2 -0.2053642272949218 11 Oxidation (M) _ALGLAAM(Oxidation (M))C_ REV__ENSG00000099194|ENST00000370355|SCD 11.114462752807354 0.7467182956244686 3 [{I|L}A]G 3 -1 25.942 0.0 0.0 3.394 0.0 0.0 0.0 520.1898588983273 520.1898588983273 14.832881222565248 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]G 3.394 + + 28 1 1.361 54591.6 1.0 6094 5370 11455 HBL1_DMSO_200M_050219_1,11466 HBL1_DMSO_200M_050219_1,11466,ALGLAAMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11467 59.22 168.0 602100.0 25 0 97422.0 + 10935 GAKRHSGL 8 128 413.2379010717148 824.4612492102297 2 413.2380554080009 MULTI CID FTMS 0 0 0 11455 622345.1875 0.9341042235578524 3 -0.2806358337402344 12 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 5.230669730166228 0.792582437072536 3 V 1 -1 9.2082 0.0 0.0 1.1169 0.0 0.0 707.3817794610094 0.0 707.3817794610094 0.0 0.796896906561031 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1169 - 22 + 1 1.361 82144.4 1.0 6095 5370 11455 HBL1_DMSO_200M_050219_1,11467 HBL1_DMSO_200M_050219_1,11467,GAKRHSGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11468 59.222 49.0 1117900.0 25 0 70734.0 + 34686 GVPSTAIREI 10 100 521.800050102988 1041.585547272776 2 521.7985107302666 MULTI CID FTMS 0 0 0 11455 628589.125 0.7099613444998504 -1 0.130950927734375 13 Unmodified _SPSRALTPTL_ ENST00000475504.6_1_10:62539923-62545554:+|nuORF;ENSG00000170312|ENST00000395284|CDK1;ENSG00000123374|ENST00000266970|CDK2;ENSG00000250506|ENST00000448471|CDK3;nc|ENSG00000123374|P24941-2|CDK2;nc|ENSG00000170312|P06493-2|CDK1;ENST00000567351.5_2_17:73997368-73998786:+|nuORF 20.453626601364224 0.5043500229302764 3 [VG]PSTA 6 8 51.911 0.0 0.0 4.9839 0.0 0.0 0.0 526.2996920221311 526.2996920221311 34.8778770033429 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [VG]PSTA 4.9839 - 87 + 1 1.361 51342.9 1.0 6096 5370 11455 HBL1_DMSO_200M_050219_1,11468 HBL1_DMSO_200M_050219_1,11468,SPSRALTPTL False False GVPSTAIREI 59.221587 521.798510730267 6486035.5 11455.0 ENST00000475504.6_1_10:62539923-62545554:+|nuORF;;ENSG00000170312|ENST00000395284|CDK1;;ENSG00000123374|ENST00000266970|CDK2;;ENSG00000250506|ENST00000448471|CDK3;;nc|ENSG00000123374|P24941-2|CDK2;;nc|ENSG00000170312|P06493-2|CDK1;;ENST00000567351.5_2_17:73997368-73998786:+|nuORF 4.338643471399943 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11469 59.224 100.0 531010.0 25 0 84200.0 + 15174 IPDGGVHIV 9 77 453.755956422724 905.497359912248 2 453.7563049197197 MULTI CID FTMS 0 0 0 11455 562057.5625 0.7550822612800692 -1 0.130950927734375 14 Unmodified _IPDGGVHIV_ ENSG00000244462|ENST00000374114|RBM12;ENST00000352393.8_2_20:34220804-34246883:-|nuORF;ENST00000440240.5_1_20:34220804-34252800:-|nuORF;ENST00000454607.5_1_20:34220607-34246883:-|nuORF 44.40701690623563 0.0526327925666318 3 {I|L}PD{[NV]|[RG]}HV{I|L} 8 4 + 59.147 0.0 0.0 6.532 6.532 91.83 0.0 0.0 0.0 31.816722645187618 9.96785147888955 9.96785147888955 16.07132552182565 0 1.5189301784845295 1.3979400086720375 0.4247425010840047 0.0 {I|L}PD{[NV]|[RG]}HV{I|L};[DP]{[NV]|[RG]}H{I|L}V{I|L};[DP]{[NV]|[RG]}{I|L}HV{I|L};[AG]A[EP]H{I|L}V{I|L};{[CP]|[EA]}QHP{I|L}V{I|L};[AG]A[EP]{I|L}HV{I|L};[QA][EP]H{I|L}V{I|L};{[CP]|[EA]}QPH{I|L}V{I|L};[QA][EP]{I|L}HV{I|L};{I|L}[RN][YE]V{I|L} 6.532;4.7571;4.376;3.0324;2.8868;2.6513;2.6223;2.5543;2.2412;2.2182 -;-;-;-;-;-;-;-;-;- 173 + 1 1.361 46395.6 1.0 6097 5370 11455 HBL1_DMSO_200M_050219_1,11469 HBL1_DMSO_200M_050219_1,11469,IPDGGVHIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11470 59.227 137.0 1107200.0 25 0 131510.0 + 1375 ALAEKFKEL 9 127 524.8053008176081 1047.596048702016 2 524.8057128787041 MULTI CID FTMS 0 0 0 11455 501236.75 0.0815890450158803 -3 0.2703208923339844 15 Unmodified _ALAEKFKEL_ ENSG00000124541|ENST00000244496|RRP36;nc|ENSG00000124541|Q96EU6-2|RRP36 78.06048673739656 0.0179866705178931 3 A{I|L}AEK{M(Oxidation (M))|F}{[SA]|[TG]}V{I|L} 10 3 + 100.93 0.0 0.0 9.6341 9.6341 85.334 0.0 0.0 0.0 25.78879698074468 10.118833609788735 10.118833609788735 1.4946561319623584 0 2.5105742396127924 2.0 1.110924374808178 0.0 A{I|L}AEK{M(Oxidation (M))|F}{[SA]|[TG]}V{I|L};A{I|L}AEK{M(Oxidation (M))|F}{[VA]|[{I|L}G]}S{I|L};A{I|L}AEK{M(Oxidation (M))|F}{[SA]|[TG]}{I|L}V;A{I|L}AEK{M(Oxidation (M))|F}{[VA]|[{I|L}G]}TV;A{I|L}A{M(Oxidation (M))|F}{I|L}KE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};A{I|L}{I|L}{M(Oxidation (M))|F}AKE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};A{I|L}A{M(Oxidation (M))|F}{I|L}EK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};A{I|L}{I|L}{M(Oxidation (M))|F}KAE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};A{I|L}{I|L}{M(Oxidation (M))|F}AEK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}A][SG]{M(Oxidation (M))|F}KE{I|L}A{I|L} 9.6341;9.4915;8.6682;8.5256;8.0317;7.7821;7.7006;7.6653;7.451;7.1724 -;-;-;-;-;-;-;-;-;- 3682 + 1 1.361 120332.9 1.0 6098 5370 11455 HBL1_DMSO_200M_050219_1,11470 HBL1_DMSO_200M_050219_1,11470,ALAEKFKEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11471 59.23 188.0 348010.0 25 0 44256.0 + 14072 IAPETLRV 8 71 449.7715856382424 897.5286183432848 2 449.7715637087822 MULTI CID FTMS 0 0 0 11455 448497.0 0.2028622540250447 2 -0.2053642272949218 16 Unmodified _IAPETLRV_ ENSG00000136824|ENST00000374793|SMC2;nc|ENSG00000136824|O95347-2|SMC2 20.453626601364224 0.6087503291685402 3 [{I|L}A]PET[R{I|L}]V 8 0 + 50.673 0.0 0.0 5.6459 5.6459 75.631 0.0 0.0 0.0 40.07722894832425 0.4000516167158352 0.4000516167158352 0.6366907986937775 0 0.3807196863200844 2.0 0.4247425010840047 0.0 + + [{I|L}A]PET[R{I|L}]V;[{I|L}A]PET[RV]{I|L} 5.6459;5.5749 +;- + 59 + 1 1.361 56724.7 1.0 6099 5370 11455 HBL1_DMSO_200M_050219_1,11471 HBL1_DMSO_200M_050219_1,11471,IAPETLRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11472 59.238 469.0 427550.0 25 0 61026.0 + 2947 AVHETLVAV 9 148 469.76897581201536 937.5233986908308 2 469.7685424685478 MULTI CID FTMS 0 0 0 11455 409008.84375 0.3630503861321302 -2 0.2050018310546875 17 Unmodified _AVHETLVAV_ ENSG00000141873|ENST00000269740|SLC39A3 70.71552829651908 0.0208223590022201 3 {[VA]|[{I|L}G]}HET{I|L}VAV 9 0 + 86.181 0.0 0.0 9.1924 9.1924 90.702 0.0 0.0 0.0 9.900692348333491 16.478174818886373 9.900692348333491 5.440680443502757 0 0.9247425010840048 1.5228787452803376 1.1861818737241734 0.0 + + {[VA]|[{I|L}G]}HET{I|L}VAV;{[VA]|[{I|L}G]}HTE{I|L}VAV;{[YC]|[HE]}T{I|L}G{I|L}VAV;{[VA]|[{I|L}G]}HETV{I|L}AV;{[VA]|[{I|L}G]}HET{I|L}AVV;{[YC]|[HE]}T{I|L}VAVAV;{[YC]|[HE]}VAT{I|L}VAV;{[VA]|[{I|L}G]}HET{I|L}G{I|L}V;{[VA]|[{I|L}G]}HTEV{I|L}AV;{[VA]|[{I|L}G]}HTE{I|L}AVV 9.1924;8.6121;8.1364;7.7761;7.7699;7.5293;7.3693;7.2897;7.1958;7.1896 +;-;-;-;-;-;-;-;-;- + 4395 1 1.361 154285.9 1.0 6100 5370 11455 HBL1_DMSO_200M_050219_1,11472 HBL1_DMSO_200M_050219_1,11472,AVHETLVAV True True AVHETLVAV 59.238424 469.768542468548 9978467.0 11455.0 ENSG00000141873|ENST00000269740|SLC39A3 6.109612941741943 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11473 59.242 207.0 464270.0 25 0 38751.0 + 12436 GTVDDVPKL 9 129 472.25986984265046 942.5051867521008 2 472.2583801150322 MULTI CID FTMS 0 0 0 11455 396779.0 0.6768145898108257 -1 0.130950927734375 18 Unmodified _GTVDDVPKL_ ENSG00000110917|ENST00000228506|MLEC 20.41453444215458 0.284085796332423 3 {[SA]|[TG]}VDVDPK{I|L} 9 2 + 62.233 0.0 0.0 6.603 6.603 86.344 0.0 0.0 0.0 49.75903843015388 5.912405442981701 5.912405442981701 6.064921830680703 0 0.3807196863200844 1.5228787452803376 0.3054621874040891 0.0 {[SA]|[TG]}VDVDPK{I|L};{[SA]|[TG]}VDDVPK{I|L};{[SA]|[TG]}VDVD{I|L}[KP];{[SA]|[TG]}VDV[KP]EV;{[SA]|[TG]}VDV[KP]D{I|L};{[SA]|[TG]}VDDV{I|L}[KP];{[SA]|[TG]}V[RH]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[SA]|[TG]}RR[EP]EV;{[SA]|[TG]}RR[EP]D{I|L};{[SA]|[TG]}RR[DN][KP] 6.603;5.9595;5.3634;4.9585;4.8035;4.7199;2.0328;1.7708;1.6158;0.50567 -;+;-;-;-;-;-;-;-;- + 367 + 1 1.361 80377.9 1.0 6101 5370 11455 HBL1_DMSO_200M_050219_1,11473 HBL1_DMSO_200M_050219_1,11473,GTVDDVPKL False True GTVDDVPKL 59.242355 472.258380115032 6480815.0 11455.0 ENSG00000110917|ENST00000228506|MLEC 3.519789298375448 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11474 59.246 195.0 446620.0 25 0 61329.0 + 44077 YIVFLSSYL 9 106 552.8048833884802 1103.5952138437603 2 552.8065063357353 MULTI CID FTMS 0 0 0 11455 264766.25 0.8260454312702574 -1 0.130950927734375 19 Unmodified _YIVFLSSYL_ REV__ENSG00000162426|ENST00000471889|SLC45A1;REV__ENST00000497660.5_1_1:8390216-8404070:+|nuORF 24.67388899826682 0.2172451872415813 3 [Y{I|L}]V{M(Oxidation (M))|F} 4 -1 31.598 0.0 0.0 2.8632 0.0 0.0 0.0 578.3062227838499 578.3062227838499 17.856216463058274 0.0 0.0 0.0 0 0.6237125054200234 2.0 0.0 0.0 [Y{I|L}]V{M(Oxidation (M))|F} 2.8632 + + 380 + 1 1.361 71735.5 1.0 6102 5370 11455 HBL1_DMSO_200M_050219_1,11474 HBL1_DMSO_200M_050219_1,11474,YIVFLSSYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11475 59.25 190.0 436330.0 25 0 59338.0 + 19820 LGYSVYRTV 9 120 529.287931792074 1056.561310650948 2 529.2866699099541 MULTI CID FTMS 0 0 0 11455 235961.84375 0.54708717365813 -1 0.130950927734375 20 Unmodified _LGYSVYRTV_ ENSG00000173418|ENST00000334982|NAA20 32.037481411007896 0.1235546156350648 3 {I|L}GYSVYRTV 9 0 + 75.267 0.0 0.0 7.1237 7.1237 81.968 0.0 0.0 0.0 28.696662315049927 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.9634679910804403 1.2218487496163564 0.1923877696554315 0.0 + + {I|L}GYSVYRTV;{I|L}GYSVYRS{I|L};{I|L}GYVSYRTV;{I|L}GYVSYRS{I|L};{I|L}G[WY]YRTV;{I|L}G[WY]YRS{I|L};{I|L}GY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}]{[CT]|[{M(Oxidation (M))|F}G]};{I|L}GYV[YK]{I|L}CV;{I|L}GYS[QP][KP][PA];{I|L}GYV[YK]{M(Oxidation (M))|F}[PA] 7.1237;6.9571;6.6722;6.5055;4.7476;4.5809;3.4984;3.3344;3.1437;3.0603 +;-;-;-;-;-;-;-;-;- + 812 + 1 1.361 67306.0 1.0 6103 5370 11455 HBL1_DMSO_200M_050219_1,11475 HBL1_DMSO_200M_050219_1,11475,LGYSVYRTV True True LGYSVYRTV 59.249751 529.286669909954 2164670.25 11455.0 ENSG00000173418|ENST00000334982|NAA20 7.000765164693196 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11477 59.254 19.0 1678600.0 25 0 152780.0 + 21750 LPMGSIKNV 9 65 479.7732165810685 957.5318802289372 2 479.7735473513603 MULTI CID FTMS 0 0 0 11476 2491014.75 0.9906892268851818 1 -0.1525421142578125 1 Unmodified _LPMGSIKNV_ ENSG00000103353|ENST00000395878|UBFD1;ENST00000563366.5_1_16:23573052-23581908:+|nuORF;ENST00000603335.1_1_4:78033720-78034596:-|nuORF 34.40172386719151 0.1061884637610825 3 {I|L}P{[DS]|[MA]|[CV]|TT}WKNV 8 3 + 60.5 0.0 0.0 6.3183 6.3183 90.331 0.0 0.0 0.0 44.38136783423551 10.846055073405113 10.846055073405113 12.149392758355177 0 0.4247425010840047 2.0 0.0 0.2887254899964357 {I|L}P{[DS]|[MA]|[CV]|TT}WKNV;{I|L}P{[DS]|[MA]|[CV]|TT}WKGGV 6.3183;5.0495 -;- 74 + 1 1.356 33352.1 1.0 6104 5371 11476 HBL1_DMSO_200M_050219_1,11477 HBL1_DMSO_200M_050219_1,11477,LPMGSIKNV True True LPMGSIKNV 59.253993 479.77354735136 37511644.0 11476.0 ENST00000603335.1_1_4:78033720-78034596:-|nuORF;;ENSG00000103353|ENST00000395878|UBFD1;;ENST00000563366.5_1_16:23573052-23581908:+|nuORF 7.102789560953776 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11478 59.264 544.0 289200.0 25 0 64491.0 -1 0 61 1126.4453248689267 3376.3141452069804 3 1127.114916980267 MULTI CID FTMS 0 0 0 11476 452666.25 0.9952825268802796 1 -0.1525421142578125 2 3 V[WM]P{I|L}TM 7 -1 23.064 0.0 0.0 0.68312 0.0 0.0 1943.663096478268 571.2160552750208 2514.8791517532886 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 V[WM]P{I|L}TM 0.68312 - 402 + 1 1.356 134662.1 1.0 6105 5371 11476 HBL1_DMSO_200M_050219_1,11478 HBL1_DMSO_200M_050219_1,11478, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11479 59.265 34.0 1270100.0 25 0 108220.0 + 33673 SIVYHLTP 8 71 465.2598967739088 0 465.2598144412041 PEAK CID FTMS 0 0 0 11476 915029.8125 0.8116426679954111 -2 0.1837730407714843 3 Unmodified _SIVYHLTP_ REV__ENSG00000006831|ENST00000357103|ADIPOR2 12.531546534597751 0.5131024102181418 3 T{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VDG 7 -1 11.726 0.0 0.0 1.2629 0.0 0.0 115.06879149528012 68.05139337711171 183.1201848723918 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VDG 1.2629 - 169 + 1 1.356 40139.7 1.0 6106 5371 11476 HBL1_DMSO_200M_050219_1,11479 HBL1_DMSO_200M_050219_1,11479,SIVYHLTP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11480 59.267 114.0 1077900.0 25 0 124830.0 + 38958 TVPDEIQEV 9 129 515.2586523337754 1028.5027517343508 2 515.2584716677666 MULTI CID FTMS 0 0 0 11476 791514.5625 0.7411034115176025 -2 0.1837730407714843 4 Unmodified _TVPDEIQEV_ ENSG00000103657|ENST00000443617|HERC1;ENST00000560519.1_1_15:64026898-64041594:-|nuORF 39.957323273325 0.0756908302845263 3 {NN|[MP]|[D{I|L}]|[EV]}EPQE 6 5 54.095 0.0 0.0 5.2596 0.0 0.0 0.0 314.1714526872211 314.1714526872211 18.164861929005333 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.8473349592275301 0.6747425010840047 {NN|[MP]|[D{I|L}]|[EV]}EPQE 5.2596 - 870 1 1.356 94909.6 1.0 6107 5371 11476 HBL1_DMSO_200M_050219_1,11480 HBL1_DMSO_200M_050219_1,11480,TVPDEIQEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11481 59.27 119.0 932060.0 25 0 98194.0 + 4543 DAYPQRIKF 9 121 379.8738755666132 1136.5997973000397 3 379.8731567263603 MULTI CID FTMS 0 0 0 11476 493768.09375 0.1066162356163774 -2 0.1837730407714843 5 Unmodified _DAYPQRIKF_ ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13753187-13770868:+|nuORF;nc|ENSG00000046651|O75665-2|OFD1;nc|ENSG00000046651|O75665-3|OFD1 18.373094154950223 0.3393451798331396 3 {[DA]|[EG]}YPQ[R{I|L}]K{M(Oxidation (M))|F} 9 0 + 45.529 0.0 0.0 4.0058 4.0058 81.254 0.0 0.0 0.0 30.580912256344 1.717131163859314 1.717131163859314 9.208187539523747 0 0.3494850021680094 1.6989700043360187 0.0 0.3494850021680094 + + {[DA]|[EG]}YPQ[R{I|L}]K{M(Oxidation (M))|F};{[DA]|[EG]}YP[AG][R{I|L}]K{M(Oxidation (M))|F} 4.0058;3.1956 +;- + 92 + 1 1.356 94709.8 1.0 6108 5371 11476 HBL1_DMSO_200M_050219_1,11481 HBL1_DMSO_200M_050219_1,11481,DAYPQRIKF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11482 59.273 202.0 633310.0 25 0 109790.0 + 45814 YYNTAVKL 8 132 486.26399596467394 970.513438996148 2 486.2639037966728 MULTI CID FTMS 0 0 0 11476 396544.46875 1.0 0 0.0 6 Unmodified _YYNTAVKL_ ENSG00000090316|ENST00000303400|MAEA;ENST00000503693.1_1_4:1283701-1322488:+|nuORF;nc|ENSG00000090316|Q7L5Y9-2|MAEA;nc|ENSG00000090316|Q7L5Y9-3|MAEA;nc|ENSG00000090316|Q7L5Y9-4|MAEA;nc|ENSG00000090316|Q7L5Y9-5|MAEA 64.23631603340823 0.116217441302575 3 YYNTAVK{I|L} 8 0 + 81.953 0.0 0.0 8.4443 8.4443 90.41 0.0 0.0 0.0 36.40978057358332 6.020599913279625 6.020599913279625 6.020599913279625 0 0.3494850021680094 2.0 0.3807196863200844 1.110924374808178 + + YYNTAVK{I|L};YYNTAV{I|L}K;YYGGTAVK{I|L};YYGGTAV{I|L}K;YYNTA[K{I|L}]V;YYGGTA[K{I|L}]V 8.4443;7.824;7.49;6.8696;6.4841;5.5298 +;-;-;-;-;- + 271 + 1 1.356 98119.8 1.0 6109 5371 11476 HBL1_DMSO_200M_050219_1,11482 HBL1_DMSO_200M_050219_1,11482,YYNTAVKL True True YYNTAVKL 59.273476 486.263903796673 3274437.25 11476.0 nc|ENSG00000090316|Q7L5Y9-5|MAEA;;nc|ENSG00000090316|Q7L5Y9-2|MAEA;;nc|ENSG00000090316|Q7L5Y9-3|MAEA;;nc|ENSG00000090316|Q7L5Y9-4|MAEA;;ENST00000503693.1_1_4:1283701-1322488:+|nuORF;;ENSG00000090316|ENST00000303400|MAEA 6.464332739512126 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11483 59.278 241.0 636350.0 25 0 39650.0 42898 VVPGQIPS 8 168 398.7305494689636 0 398.7301513552666 PEAK CID FTMS 0 0 0 11476 392532.3125 0.8405150862715036 9 -0.9733428955078124 7 Unmodified _VVPGQIPS_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 6.354104778181461 0.5763711549229614 3 A 1 8 4.6041 0.0 0.0 0.57881 0.0 0.0 625.3042100445695 96.08258997135 721.3868000159194 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.57881 - 21 + 1 1.356 121230.5 1.0 6110 5371 11476 HBL1_DMSO_200M_050219_1,11483 HBL1_DMSO_200M_050219_1,11483,VVPGQIPS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11484 59.282 194.0 698330.0 25 0 119180.0 + 4544 DAYPQRIKF 9 101 569.3062943990119 1136.5980358648235 2 569.3066894412041 MULTI CID FTMS 0 0 0 11476 350384.75 0.1293838582549958 -3 0.2578239440917969 8 Unmodified _DAYPQRIKF_ ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13753187-13770868:+|nuORF;nc|ENSG00000046651|O75665-2|OFD1;nc|ENSG00000046651|O75665-3|OFD1 53.31671820480216 0.0330978755772958 3 {[DA]|[EG]}YPQR{I|L}K{M(Oxidation (M))|F} 9 0 + 68.316 0.0 0.0 6.0106 6.0106 87.811 0.0 0.0 0.0 29.881062318217104 11.082268588648247 11.082268588648247 9.208187539523747 0 1.9419628234359576 1.5228787452803376 0.0 1.035666875892183 + + {[DA]|[EG]}YPQR{I|L}K{M(Oxidation (M))|F};{[DA]|[EG]}YP[AG]R{I|L}K{M(Oxidation (M))|F};[QP]R{I|L}KY{[DA]|[EG]}{M(Oxidation (M))|F};[Y{I|L}][{M(Oxidation (M))|F}V]HA{I|L}K{M(Oxidation (M))|F};[Y{I|L}][KP][DN]{I|L}K{M(Oxidation (M))|F};[QP]R{[MG]|[TS]}[{M(Oxidation (M))|F}V]R{M(Oxidation (M))|F};[QP]R{I|L}[Y{I|L}][NS]{M(Oxidation (M))|F};[Y{I|L}][{M(Oxidation (M))|F}V]HRR{M(Oxidation (M))|F};[QP]R{I|L}[Y{I|L}]Y{[QG]|[NA]} 6.0106;5.2004;2.1978;1.0202;0.84288;0.6626;0.65796;0.52094;0.3005 +;-;-;-;-;-;-;-;- + 200 + 1 1.356 107719.1 1.0 6111 5371 11476 HBL1_DMSO_200M_050219_1,11484 HBL1_DMSO_200M_050219_1,11484,DAYPQRIKF True True DAYPQRIKF 59.281718 569.306689441204 92029572.0 11476.0 nc|ENSG00000046651|O75665-3|OFD1;;nc|ENSG00000046651|O75665-2|OFD1;;ENSG00000046651|ENST00000340096|OFD1;;ENST00000490265.5_1_X:13753187-13770868:+|nuORF 5.228248596191406 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11485 59.286 199.0 944400.0 25 0 155430.0 + 11030 GAYDGEEHLI 10 153 552.2543248928043 1102.4940968524086 2 552.2570678591728 MULTI CID FTMS 0 0 0 11476 424568.0625 0.4234765252887853 -2 0.1837730407714843 9 Unmodified _GAYDGEEHLI_ ENSG00000214107|ENST00000397548|MAGEB1 52.268347100219714 0.0668375294751462 3 [AG]YDGEEH{I|L}{I|L} 10 0 + 53.389 0.0 0.0 4.8425 4.8425 72.632 0.0 0.0 0.0 21.865494540743725 6.73393743112328 6.73393743112328 0.5115252244738144 0 0.6307196863200843 1.3979400086720375 0.6549471895720985 0.0 + + [AG]YDGEEH{I|L}{I|L};[AG]YDWEH{I|L}{I|L};[AG]YDDAEH{I|L}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}Q{I|L}TTY{[CP]|[EA]};[AG]YDG{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}T{I|L};[AG]Y[{M(Oxidation (M))|F}V]{I|L}AMTM;{[YD]|[{M(Oxidation (M))|F}M]}[AG]{I|L}TTY{[CP]|[EA]};[AG]DY{I|L}TTY{[CP]|[EA]};[AG]YDG{[{M(Oxidation (M))|F}H]|[RQ]}[HS]{I|L};[AG]YDY[W{I|L}]C{I|L} 4.8425;4.7961;4.6828;3.9643;3.5347;3.3504;3.1291;3.128;2.966;2.8992 +;-;-;-;-;-;-;-;-;- + 2803 + 1 1.356 143529.1 1.0 6112 5371 11476 HBL1_DMSO_200M_050219_1,11485 HBL1_DMSO_200M_050219_1,11485,GAYDGEEHLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11486 59.294 456.0 400870.0 25 0 30159.0 + 36386 SYQIPTENSM 10 151 585.2619113564443 1168.5092697796886 2 585.2607910037041 MULTI CID FTMS 0 0 0 11476 338415.15625 1.0 0 0.0 10 Unmodified _SYQIPTENSM_ ENSG00000046604|ENST00000261590|DSG2 67.83816525789305 0.0190062514522628 3 [TP]ENSM 6 4 41.635 0.0 0.0 3.5631 0.0 0.0 0.0 506.22781161001984 506.22781161001984 0.6920031723525923 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.3556270500406935 0.6989700043360187 + [TP]ENSM 3.5631 + + 1293 1 1.356 138558.6 1.0 6113 5371 11476 HBL1_DMSO_200M_050219_1,11486 HBL1_DMSO_200M_050219_1,11486,SYQIPTENSM True True SYQIPTENSM 59.293634 585.260791003704 3337797.0 11476.0 ENSG00000046604|ENST00000261590|DSG2 5.610507806142171 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11487 59.298 217.0 557440.0 25 0 65357.0 + 34206 SLPDTFNDA 9 140 490.22313411344055 978.4317152936812 2 490.2228576540947 MULTI CID FTMS 0 0 0 11476 312744.78125 1.0 0 0.0 11 Unmodified _SLPDTFNDA_ ENSG00000141052|ENST00000425538|MYOCD;nc|ENSG00000141052|Q8IZQ8-2|MYOCD;nc|ENSG00000141052|Q8IZQ8|MYOCD 21.74664581756881 0.2544899275067181 3 [DP]T{M(Oxidation (M))|F}ND 6 3 44.231 0.0 0.0 4.5206 0.0 0.0 0.0 286.14248166940644 286.14248166940644 26.037946671247163 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.6861818737241735 0.8494850021680094 + [DP]T{M(Oxidation (M))|F}ND 4.5206 + + 445 1 1.356 95562.7 1.0 6114 5371 11476 HBL1_DMSO_200M_050219_1,11487 HBL1_DMSO_200M_050219_1,11487,SLPDTFNDA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11488 59.306 485.0 229280.0 25 0 46757.0 29650 QNKIYNHFLL 10 91 645.351920412504 1288.689287891808 2 645.3520385622978 MULTI CID FTMS 0 0 0 11476 314546.5625 1.0 0 0.0 12 Unmodified _QNKIYNHFLL_ ENST00000475100.5_1_9:140470815-140473334:-|nuORF 19.256988751693697 0.5244284437930726 3 {I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 4 8 25.445 0.0 0.0 1.9745 0.0 0.0 0.0 802.3842867486936 802.3842867486936 8.662575976154923 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 {I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 1.9745 - 56 + 1 1.356 84672.6 1.0 6115 5371 11476 HBL1_DMSO_200M_050219_1,11488 HBL1_DMSO_200M_050219_1,11488,QNKIYNHFLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11489 59.312 291.0 692720.0 25 0 73230.0 + 24006 LVWSPKILV 9 202 352.2255770994721 1053.6549018986163 3 352.5596801638603 MULTI CID FTMS 0 0 0 11476 260536.421875 0.2995704302079431 3 -0.3515357971191406 13 Unmodified _LVWSPKILV_ REV__ENSG00000165076|ENST00000350549|PRSS37 12.872603262515298 0.4882369880199512 3 {I|L}K 2 -1 11.836 0.0 0.0 1.1233 0.0 0.0 230.16166722989607 579.2900901622083 809.4517573921044 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {I|L}K 1.1233 - 157 + 1 1.356 162452.6 1.0 6116 5371 11476 HBL1_DMSO_200M_050219_1,11489 HBL1_DMSO_200M_050219_1,11489,LVWSPKILV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11490 59.318 271.0 329910.0 25 0 57112.0 + 39102 TWPKEVRQL 9 122 386.2197630760284 1155.6374598282853 3 386.2194396853447 MULTI CID FTMS 0 0 0 11476 241029.5625 1.0 0 0.0 14 Unmodified _TWPKEVRQL_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000581551.1_1_17:62499042-62499524:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5 8.444304893310646 0.6198977621250997 3 {[WT]|[RM]}PKE 5 4 45.471 0.0 0.0 3.9347 0.0 0.0 0.0 511.3017061822874 511.3017061822874 34.50196235524295 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {[WT]|[RM]}PKE 3.9347 + + 57 + 1 1.356 77712.5 1.0 6117 5371 11476 HBL1_DMSO_200M_050219_1,11490 HBL1_DMSO_200M_050219_1,11490,TWPKEVRQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11491 59.332 800.0 163270.0 25 0 8804.0 -1 0 119 881.9123505721144 1761.8101482110287 2 881.9118530154228 MULTI CID FTMS 0 0 0 11476 235619.53125 0.9508567178262154 -2 0.1837730407714843 15 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ[{I|L}A][C(Carbamidomethyl (C))M]{I|L}Q 15 -1 + 76.569 0.0 0.0 4.3461 4.3461 73.811 0.0 0.0 0.0 2.112044607530308 2.112044607530308 2.112044607530308 2.112044607530308 0 1.305462187404089 0.0 0.0 2.115356566548286 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ[{I|L}A][C(Carbamidomethyl (C))M]{I|L}Q;[NP]{I|L}N{[CA]|SS}[H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ[{I|L}A]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[NP]{I|L}[TP][DP]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[KT]{[YC]|[HE]}EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]T[{I|L}P][DP]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEARR[C(Carbamidomethyl (C))M]{I|L}Q;[NP]T[HT][{I|L}A]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}[C(Carbamidomethyl (C))Q][H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NE[HQ]{[ET]|[MV]}N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.3461;4.2262;4.1154;4.11;3.9678;3.9667;3.9663;3.8287;3.8001;3.7609 -;-;-;-;-;-;-;-;-;- 1411 + 1 1.356 89866.6 0.8899999856948853 6118 5371 11476 HBL1_DMSO_200M_050219_1,11491 HBL1_DMSO_200M_050219_1,11491, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11492 59.346 800.0 189980.0 25 0 13317.0 + 18110 KTLEDGVRLV 10 161 565.3328067325879 1128.6510605319756 2 565.3325683474541 MULTI CID FTMS 0 0 0 11476 192932.203125 1.0 0 0.0 16 Unmodified _KTLEDGVRLV_ ENSG00000156299|ENST00000541036|TIAM1;nc|ENSG00000156299|Q13009-2|TIAM1 39.41278653710922 0.1637679073694847 3 KT{I|L}EDRRV{I|L} 9 4 + 70.086 0.0 0.0 6.2097 6.2097 76.614 0.0 0.0 0.0 16.47817481888638 0.1930515519538715 0.1930515519538715 0.1930515519538715 0 1.7346368802282015 0.0 1.1549471895720984 0.0 KT{I|L}EDRRV{I|L};KT{I|L}EDRR{I|L}V;KT{I|L}ED[VG]RV{I|L};KT{I|L}ED[VG]R{I|L}V;KT{I|L}ED{[TV]|[{I|L}S]}KPV;KT{I|L}{[TV]|[{I|L}S]}[RK]{M(Oxidation (M))|F}H;[KT]{I|L}{[TV]|[{I|L}S]}DE[VP]K;[{I|L}T]K{[TV]|[{I|L}S]}DE[VP]K;KT{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[NS]KPV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[RV][KT]TK 6.2097;6.1926;5.3938;5.3767;4.6838;3.6258;2.7926;2.4007;2.3626;1.2419 -;-;-;+;-;-;-;-;-;- + 393 + 1 1.356 115697.5 0.9900000095367432 6119 5371 11476 HBL1_DMSO_200M_050219_1,11492 HBL1_DMSO_200M_050219_1,11492,KTLEDGVRLV False True KTLEDGVRLV 59.345513 565.332568347454 1139190.5 11476.0 ENSG00000156299|ENST00000541036|TIAM1;;nc|ENSG00000156299|Q13009-2|TIAM1 4.231238842010498 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11493 59.359 800.0 174390.0 25 0 11058.0 -1 0 101 865.9009262064662 0 865.9006225466728 PEAK CID FTMS 0 0 0 11476 209451.90625 0.9405108185684086 -1 0.0528221130371093 17 3 PN{I|L}NAD[YT]AAGG{I|L} 13 -1 71.223 0.0 0.0 4.1175 0.0 0.0 261.0785217533456 208.07317529849848 469.15169705184405 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 0.25 0.8494850021680094 PN{I|L}NAD[YT]AAGG{I|L} 4.1175 - 1820 + 1 1.356 98735.1 0.8399999737739563 6120 5371 11476 HBL1_DMSO_200M_050219_1,11493 HBL1_DMSO_200M_050219_1,11493, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11494 59.374 800.0 199750.0 25 0 17493.0 + 16428 IYYTGKYQSL 10 157 618.3184045650091 1234.6222561968182 2 618.3166992068291 MULTI CID FTMS 0 0 0 11476 193835.21875 1.0 0 0.0 18 Unmodified _IYYTGKYQSL_ ENSG00000005810|ENST00000544440|MYCBP2;nc|ENSG00000005810|O75592-2|MYCBP2 61.60191391372663 0.0323840705564037 3 {I|L}YYTGK[YQ]S{I|L} 10 0 + 79.28 0.0 0.0 6.4214 6.4214 86.272 0.0 0.0 0.0 28.9363034371533 6.53212513775344 6.53212513775344 6.53212513775344 0 0.7302046884880937 2.0 1.2416440611282626 0.75 + + {I|L}YYTGK[YQ]S{I|L};{I|L}YYTGK[YQ]TV;{I|L}YYTG{[WT]|[RM]}GK{M(Oxidation (M))|F};{I|L}YYT[YT]HK{M(Oxidation (M))|F};{I|L}YYTGK[WH]AP;{I|L}YYTGK[EP]PAP;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}SQY[KC]S{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}SYQ[KC]S{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}SQY[KC]TV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}S[AG]Y[KC]S{I|L} 6.4214;5.8923;4.9685;4.927;4.8876;4.8577;2.8147;2.3316;2.2856;2.0724 +;-;-;-;-;-;-;-;-;- + 2509 + 1 1.356 122704.0 0.949999988079071 6121 5371 11476 HBL1_DMSO_200M_050219_1,11494 HBL1_DMSO_200M_050219_1,11494,IYYTGKYQSL True True IYYTGKYQSL 59.374369 618.316699206829 1780656.25 11476.0 nc|ENSG00000005810|O75592-2|MYCBP2;;ENSG00000005810|ENST00000544440|MYCBP2 5.662650426228841 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11495 59.388 800.0 201040.0 25 0 20741.0 + -1 AYYEHRLQL 9 178 596.280730592966 1190.546908252732 2 596.7818481326103 MULTI CID FTMS 0 0 0 11476 178427.21875 1.0 0 0.0 19 Carbamidomethyl (C),Oxidation (M) _VSM(Oxidation (M))TC(Carbamidomethyl (C))LNLTH_ ENSG00000133119|ENST00000380071|RFC3 18.1463463914782 0.5430639438673815 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[RK]{I|L}YY 8 -1 30.128 0.0 0.0 2.5306 0.0 0.0 0.0 66.95229070479527 66.95229070479527 13.085015265082802 0.0 0.0 0.0 0 0.0 2.0 0.5055690986777881 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[RK]{I|L}YY 2.5306 - 1755 1 1.356 122013.7 0.8600000143051147 6122 5371 11476 HBL1_DMSO_200M_050219_1,11495 HBL1_DMSO_200M_050219_1,11495,VSMTCLNLTH False False AYYEHRLQL 59.388203 596.2809 718578.5 11476.0 ENSG00000133119|ENST00000380071|RFC3 5.411178906758626 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11496 59.402 800.0 56004.0 25 0 5417.0 -1 0 79 916.7157462563572 2747.1254093692714 3 917.3829833865166 MULTI CID FTMS 0 0 0 11476 188225.484375 1.0 0 0.0 20 3 [QT]PW{[HG]|PP}P{I|L} 8 -1 15.741 0.0 0.0 0.57298 0.0 0.0 0.0 1827.6130591023127 1827.6130591023127 -1.2272043586724577 0.0 -1.2272043586724577 0.0 0 0.0 0.0 0.2887254899964357 0.0 [QT]PW{[HG]|PP}P{I|L} 0.57298 - 585 1 1.356 41144.4 0.7200000286102295 6123 5371 11476 HBL1_DMSO_200M_050219_1,11496 HBL1_DMSO_200M_050219_1,11496, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11498 59.407 13.0 2946500.0 25 0 468850.0 + 44635 YPFKPPKV 8 65 325.86048683472575 974.5596311043772 3 325.8603088259697 MULTI CID FTMS 0 0 0 11497 1632850.0 0.0211694283402566 5 -0.4744987487792969 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 11.640296217721598 0.738950129755968 3 [KP]PK{M(Oxidation (M))|F}P[YV] 8 4 + 24.614 0.0 0.0 2.5257 2.5257 72.857 0.0 0.0 0.0 2.04119982655925 -2.340832060333682 -2.340832060333682 4.259687322722812 0 0.0 0.0 0.0 0.0 [KP]PK{M(Oxidation (M))|F}P[YV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}KPP{[QV]|[N{I|L}]|[RA]|[KV]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 2.5257;2.0886;1.4001 -;+;- + 81 1 1.356 38565.6 1.0 6124 5372 11497 HBL1_DMSO_200M_050219_1,11498 HBL1_DMSO_200M_050219_1,11498,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11499 59.408 26.0 1188800.0 25 0 103180.0 + 44649 YPFKPPKV 8 59 488.2869567505858 974.5593605679716 2 488.2870056033134 MULTI CID FTMS 0 0 0 11497 723091.0 0.0213085454489731 7 -0.6524887084960938 2 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 18.13498045792455 0.6430038125133779 3 YP{M(Oxidation (M))|F}K 4 4 49.725 0.0 0.0 5.1023 0.0 0.0 0.0 436.2575393863905 436.2575393863905 36.53720958383822 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + YP{M(Oxidation (M))|F}K 5.1023 + + 25 + 1 1.356 30004.2 1.0 6125 5372 11497 HBL1_DMSO_200M_050219_1,11499 HBL1_DMSO_200M_050219_1,11499,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11500 59.409 17.0 2680500.0 25 0 275640.0 + 27299 PHLGPLVQ 8 72 430.75303118211576 859.4915094310315 2 430.7530700564384 MULTI CID FTMS 0 0 0 11497 3416028.75 0.7400268625757203 1 -0.0752716064453125 3 Unmodified _PHLGPLVQ_ REV__ENSG00000177303|ENST00000321617|CASKIN2;REV__nc|ENSG00000177303|Q8WXE0-2|CASKIN2 30.19836241096484 0.408853459428176 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP{I|L}QV 8 -1 + 28.778 0.0 0.0 3.3483 3.3483 83.11 0.0 0.0 0.0 4.6040937697618745 14.79872819733373 4.6040937697618745 28.778128284054105 0 0.5924778212679485 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP{I|L}QV 3.3483 - 44 1 1.356 42264.8 1.0 6126 5372 11497 HBL1_DMSO_200M_050219_1,11500 HBL1_DMSO_200M_050219_1,11500,PHLGPLVQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11501 59.41 20.0 2334000.0 25 0 184030.0 + 22108 LPPPVQTQI 9 81 496.7924844808842 991.5704160285684 2 496.7926818728447 MULTI CID FTMS 0 0 0 11497 2341191.5 0.3245923551928379 -6 0.5295181274414062 4 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 61.357469665136826 0.0253304979873734 3 [{I|L}P]PPVQTQ{I|L} 9 0 + 71.926 0.0 0.0 7.2538 7.2538 62.768 0.0 0.0 0.0 17.730012720637376 16.478174818886373 16.478174818886373 0.0 0 1.2134679910804405 2.0 0.5 0.0 + + [{I|L}P]PPVQTQ{I|L};[{I|L}P]PNP{I|L}TQ{I|L};[{I|L}P]PPN{I|L}TQ{I|L};[{I|L}P]PGGP{I|L}TQ{I|L};[{I|L}P]PPVQT[AG]{I|L};[{I|L}P]PPV[AG]TQ{I|L};[{I|L}P]PNP{I|L}T[AG]{I|L};[{I|L}P]PPN{I|L}T[AG]{I|L};[{I|L}P]PPGG{I|L}TQ{I|L};[{I|L}P]PNT[{I|L}P]Q{I|L} 7.2538;7.2538;6.9502;6.3251;6.3251;6.3251;6.3251;6.0215;6.0215;5.7467 +;-;-;-;-;-;-;-;-;- + 782 1 1.356 43866.9 1.0 6127 5372 11497 HBL1_DMSO_200M_050219_1,11501 HBL1_DMSO_200M_050219_1,11501,LPPPVQTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11502 59.411 27.0 1859900.0 25 0 273050.0 + 21304 LPEPSIRSV 9 68 499.2873259038439 996.5600988744876 2 499.2875244021416 MULTI CID FTMS 0 0 0 11497 1741438.0 0.5222407821145282 -4 0.4103660583496094 5 Unmodified _LPEPSIRSV_ ENSG00000100077|ENST00000324198|GRK3;ENSG00000173020|ENST00000308595|GRK2 22.65808497894818 0.2428932432760099 3 {I|L}PEPS{I|L} 6 3 60.667 0.0 0.0 6.0876 0.0 0.0 0.0 357.19040857486567 357.19040857486567 49.246938898903366 0.0 0.0 0.0 0 0.8807196863200843 1.3979400086720375 0.0 0.0 + {I|L}PEPS{I|L} 6.0876 + + 50 + 1 1.356 43220.9 1.0 6128 5372 11497 HBL1_DMSO_200M_050219_1,11502 HBL1_DMSO_200M_050219_1,11502,LPEPSIRSV False True LPEPSIRSV 59.411248 499.287524402142 114459976.0 11497.0 ENSG00000100077|ENST00000324198|GRK3;;ENSG00000173020|ENST00000308595|GRK2 5.526321093241374 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11503 59.412 18.0 4401600.0 25 0 437150.0 + 8230 EPYPEVSRI 9 91 545.2821384926146 1088.5497240520292 2 545.2823364138603 MULTI CID FTMS 0 0 0 11497 1646151.375 0.5231577308991893 1 -0.0752716064453125 6 Unmodified _EPYPEVSRI_ ENSG00000165643|ENST00000425225|SOHLH1;nc|ENSG00000165643|Q5JUK2|SOHLH1 29.43715596616401 0.1566398223704148 3 [EP]YPEV 6 3 49.896 0.0 0.0 4.5837 0.0 0.0 0.0 371.2054372796562 371.2054372796562 37.06485629844558 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.75 0.0 + [EP]YPEV 4.5837 + + 377 + 1 1.356 69372.2 1.0 6129 5372 11497 HBL1_DMSO_200M_050219_1,11503 HBL1_DMSO_200M_050219_1,11503,EPYPEVSRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11504 59.414 35.0 984400.0 25 0 90209.0 + 29171 QFYDNKGITY 10 58 624.7984785328847 1247.5824041325693 2 624.7986938357353 MULTI CID FTMS 0 0 0 11497 1458321.875 0.6560162712806791 -1 0.1525421142578125 7 Unmodified _QFYDNKGITY_ ENSG00000152455|ENST00000354919|SUV39H2;nc|ENSG00000152455|Q9H5I1-2|SUV39H2;nc|ENSG00000152455|Q9H5I1-3|SUV39H2 22.736283301280096 0.4578556481593033 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y 3 7 28.557 0.0 0.0 2.2889 0.0 0.0 0.0 806.3709230994149 806.3709230994149 2.0780515841005496 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.0 0.0 + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y 2.2889 + + 79 + 1 1.356 34877.1 1.0 6130 5372 11497 HBL1_DMSO_200M_050219_1,11504 HBL1_DMSO_200M_050219_1,11504,QFYDNKGITY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11505 59.415 37.0 2035100.0 25 0 422500.0 + 13547 HPFHVIRI 8 92 340.20306148461736 1017.587355054052 3 340.2025939822197 MULTI CID FTMS 0 0 0 11497 1285599.375 0.3114087796317339 1 -0.0752716064453125 8 Unmodified _HPFHVIRI_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000482732.1_1_X:153628091-153628283:+|nuORF;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 53.57557251787612 0.1224291679108181 3 HP{M(Oxidation (M))|F}HV{I|L}[R{I|L}] 8 0 + 65.839 0.0 0.0 6.4701 6.4701 78.115 0.0 0.0 0.0 30.265931504406467 13.85151878060192 13.85151878060192 0.528871982441359 0 1.385151878060192 0.0 0.0 0.6861818737241735 + + HP{M(Oxidation (M))|F}HV{I|L}[R{I|L}];{I|L}HMHV{I|L}[R{I|L}];H{I|L}MHV{I|L}[R{I|L}];HP{M(Oxidation (M))|F}H{I|L}V[R{I|L}];{I|L}HMH{I|L}V[R{I|L}];H{I|L}MH{I|L}V[R{I|L}];HP{M(Oxidation (M))|F}{I|L}HV[R{I|L}];{I|L}HM{I|L}HV[R{I|L}];H{I|L}M{I|L}HV[R{I|L}];HP{I|L}{M(Oxidation (M))|F}HV[R{I|L}] 6.4701;6.4181;6.3918;5.7832;5.7313;5.7049;5.1133;5.0613;5.035;4.0566 +;-;-;-;-;-;-;-;-;- + 170 + 1 1.356 68567.4 1.0 6131 5372 11497 HBL1_DMSO_200M_050219_1,11505 HBL1_DMSO_200M_050219_1,11505,HPFHVIRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11506 59.416 50.0 976680.0 25 0 82065.0 21707 LPLSFHELL 9 68 534.8068297460504 1067.5991065589008 2 534.8062011599541 MULTI CID FTMS 0 0 0 11497 829419.9375 0.3006376934386603 -2 0.2053642272949218 9 Unmodified _LPLSFHELL_ ENST00000396969.8_1_19:14638565-14640081:-|nuORF;ENST00000594099.5_2_19:14638565-14640206:-|nuORF;ENST00000595992.5_2_19:14638565-14640081:-|nuORF;ENST00000596853.5_2_19:14638565-14639960:-|nuORF 21.74664581756881 0.2544899275067181 3 {I|L}PAE 4 6 50.918 0.0 0.0 4.7694 0.0 0.0 0.0 654.3596285455686 654.3596285455686 34.21826823685329 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}PAE 4.7694 - 38 + 1 1.356 44260.2 1.0 6132 5372 11497 HBL1_DMSO_200M_050219_1,11506 HBL1_DMSO_200M_050219_1,11506,LPLSFHELL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11507 59.418 98.0 814700.0 25 0 60607.0 + -1 DGTTPLHI 8 97 427.21965570921407 426.2123792426141 1 427.2240783572197 MULTI CID FTMS 0 0 0 11497 650286.9375 0.9927404491847664 1 -0.0752716064453125 10 ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1 3 [DG]R 3 -1 17.28 0.0 0.0 4.0542 0.0 0.0 0.0 95.04786443232032 95.04786443232032 5.29000383230845 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3054621874040891 0.0 [DG]R 4.0542 - 47 1 1.356 67365.6 1.0 6133 5372 11497 HBL1_DMSO_200M_050219_1,11507 HBL1_DMSO_200M_050219_1,11507, False False DGTTPLHI 59.418233 427.22407835722 5981008.5 11497.0 ENSG00000109320|ENST00000226574|NFKB1;;nc|ENSG00000109320|P19838|NFKB1;;nc|ENSG00000109320|P19838-3|NFKB1 5.182644844055176 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11508 59.422 222.0 321820.0 25 0 35168.0 -1 0 88 909.0597966069176 2724.1575604209524 3 909.3937255740166 MULTI CID FTMS 0 0 0 11497 470074.8125 0.2434587351975075 1 -0.0752716064453125 11 3 [NS]DYKQ[TP]Y 9 -1 38.203 0.0 0.0 1.4024 0.0 0.0 0.0 1624.650907572905 1624.650907572905 19.395172868554027 0.0 0.0 0.0 0 0.0 0.0 0.9802046884880936 1.295114016114533 [NS]DYKQ[TP]Y 1.4024 - 2394 1 1.356 54903.6 1.0 6134 5372 11497 HBL1_DMSO_200M_050219_1,11508 HBL1_DMSO_200M_050219_1,11508, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11509 59.425 136.0 460330.0 25 0 55875.0 40483 VIQCILGTSR 10 94 363.87474224975335 1088.60239734946 3 363.8744384646416 MULTI CID FTMS 0 0 0 11497 403959.15625 0.2628467333111235 2 -0.1989936828613281 12 Unmodified _VIQCILGTSR_ ENST00000567762.1_1_15:72767286-72810465:+|nuORF 8.97624648632007 0.6851160995914376 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}GKGPPKV 10 9 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}GKG + + 12.663 12.452 1.9177 1.1632 1.1632 48.407 0.0 0.0 0.0 0.0 0.210675929631579 0.0 0.0 0 0.0 0.0 0.0 0.2059771852360797 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}GKGPPKV 1.1632 - 106 + 1 1.356 59572.9 1.0 6135 5372 11497 HBL1_DMSO_200M_050219_1,11509 HBL1_DMSO_200M_050219_1,11509,VIQCILGTSR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11510 59.427 74.0 610080.0 25 0 72677.0 + 22800 LQVEEVHQL 9 85 547.7952540061127 1093.575955079025 2 547.7957641482353 MULTI CID FTMS 0 0 0 11497 363108.75 1.0 0 0.0 13 Unmodified _LQVEEVHQL_ ENSG00000184047|ENST00000464942|DIABLO;nc|ENSG00000184047|Q9NR28-2|DIABLO;nc|ENSG00000184047|Q9NR28-3|DIABLO 16.149105407346934 0.3995459350917656 3 [Q{I|L}]VEEV[HQ]{I|L} 9 0 + 26.392 0.0 0.0 2.4134 2.4134 66.93 0.0 0.0 0.0 6.726307269461742 0.501444527144276 0.501444527144276 0.5676571578941036 0 0.5 0.0 0.0 0.0 + + [Q{I|L}]VEEV[HQ]{I|L};[Q{I|L}]VEE[H{I|L}]QV;[Q{I|L}]VEE[H{I|L}]N{I|L};[Q{I|L}]VEE[H{I|L}][AG]V;[Q{I|L}]VEE[H{I|L}]GG{I|L};[Q{I|L}]V[KC]{[HG]|PP}NPV 2.4134;2.3615;2.3002;1.2687;1.2075;0.10144 +;-;-;-;-;- + 274 + 1 1.356 41424.4 1.0 6136 5372 11497 HBL1_DMSO_200M_050219_1,11510 HBL1_DMSO_200M_050219_1,11510,LQVEEVHQL False True LQVEEVHQL 59.426933 547.795764148235 3079769.0 11497.0 ENSG00000184047|ENST00000464942|DIABLO;;nc|ENSG00000184047|Q9NR28-3|DIABLO;;nc|ENSG00000184047|Q9NR28-2|DIABLO 6.349918842315674 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11511 59.43 177.0 389620.0 25 0 49661.0 -1 0 117 318.1964633889232 634.3783738446464 2 318.1965820193291 MULTI CID FTMS 0 0 0 11497 360419.75 0.0223162689688727 5 -0.4744987487792969 14 3 P 1 -1 6.2814 0.0 0.0 0.99017 0.0 0.0 317.1950988161776 217.10852991275627 534.3036287289339 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 P 0.99017 - 8 + 1 1.356 60703.4 1.0 6137 5372 11497 HBL1_DMSO_200M_050219_1,11511 HBL1_DMSO_200M_050219_1,11511, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11512 59.437 383.0 415970.0 25 0 32121.0 + 23096 SALHRIIEV 9 184 346.2065046246899 1035.5976844742695 3 346.5412780642509 MULTI CID FTMS 0 0 0 11497 318786.5 1.0 0 0.0 15 Unmodified _LSMRKFRV_ nc|ENSG00000067057|Q01813-2|PFKP;ENSG00000067057|ENST00000381125|PFKP 10.823927491677226 0.7510103885582552 3 E{I|L}GT{I|L} 5 8 15.662 0.0 0.0 1.5123 0.0 0.0 116.07104576210686 403.2214144342407 519.2924601963475 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}GT{I|L} 1.5123 - 276 + 1 1.356 131629.8 1.0 6138 5372 11497 HBL1_DMSO_200M_050219_1,11512 HBL1_DMSO_200M_050219_1,11512,LSMRKFRV False False SALHRIIEV 59.437229 346.541278064251 2793705.75 11497.0 nc|ENSG00000067057|Q01813-2|PFKP;;ENSG00000067057|ENST00000381125|PFKP 0.8378175099690756 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11513 59.451 770.0 476740.0 25 0 66045.0 + 41427 VPLGLAAEL 9 196 441.7680744852922 881.5215960373844 2 441.7682983279228 MULTI CID FTMS 0 0 0 11497 298654.09375 0.1595616822133437 -20 1.4798126220703125 16 Unmodified _VPLGLAAEL_ REV__ENSG00000100593|ENST00000342219|ISM2;REV__nc|ENSG00000100593|Q6H9L7-2|ISM2;REV__nc|ENSG00000100593|Q6H9L7-3|ISM2;REV__nc|ENSG00000100593|Q6H9L7-4|ISM2;REV__nc|ENSG00000100593|Q6H9L7-5|ISM2 50.855029805455786 0.0384952370514206 3 VP{I|L}{I|L}PD 6 -1 66.39 0.0 0.0 7.5313 0.0 0.0 0.0 244.1383455865844 244.1383455865844 18.1452335329798 0.0 0.0 0.0 0 0.5114393726401688 2.0 1.2302046884880935 0.0 VP{I|L}{I|L}PD 7.5313 - 1896 + 1 1.356 282685.9 1.0 6139 5372 11497 HBL1_DMSO_200M_050219_1,11513 HBL1_DMSO_200M_050219_1,11513,VPLGLAAEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11514 59.455 233.0 278120.0 25 0 58964.0 + 18484 KYMNNITYY 9 87 605.2842044462922 1208.5538559593842 2 605.2842895388603 MULTI CID FTMS 0 0 0 11497 285764.71875 1.0 0 0.0 17 Unmodified _KYMNNITYY_ ENSG00000155506|ENST00000518297|LARP1;nc|ENSG00000155506|Q6PKG0-3|LARP1 37.97399986684836 0.0865783450051559 3 [YT][HA]YKTYY 9 5 + 58.623 0.0 0.0 4.8507 4.8507 84.93 0.0 0.0 0.0 11.561281911740195 16.478174818886373 11.561281911740195 10.299632233774432 0 0.9247425010840048 2.0 0.5 0.3494850021680094 [YT][HA]YKTYY;[YT][YK][HA]TYY;[MN]N[YK]{I|L}TYY;{NN|[MP]|[D{I|L}]|[EV]}M[YK]{I|L}TYY;[MN]N{I|L}YKTYY;{NN|[MP]|[D{I|L}]|[EV]}M{I|L}YKTYY;{NN|[MP]|[D{I|L}]|[EV]}{I|L}MYKTYY;[MN]GG[YK]{I|L}TYY;[MN]GG{I|L}YKTYY;[MN][QP][RH]TYY 4.8507;3.9984;3.894;3.8386;3.7509;3.6956;3.5499;3.1321;2.989;2.16 -;-;-;-;-;-;-;-;-;- 299 1 1.356 48961.9 1.0 6140 5372 11497 HBL1_DMSO_200M_050219_1,11514 HBL1_DMSO_200M_050219_1,11514,KYMNNITYY True True KYMNNITYY 59.454925 605.28428953886 2937939.75 11497.0 ENSG00000155506|ENST00000518297|LARP1;;nc|ENSG00000155506|Q6PKG0-3|LARP1 6.525605360666911 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11515 59.458 149.0 883470.0 25 0 75717.0 + 12555 GVHGNFPRL 9 130 332.8509581534894 995.5310450606682 3 332.8502685427666 MULTI CID FTMS 0 0 0 11497 280445.9375 0.7381978675985634 1 -0.0752716064453125 18 Unmodified _GVHGNFPRL_ ENSG00000071794|ENST00000310053|HLTF;ENST00000481663.1_1_3:148801501-148804285:-|nuORF 28.486842064014134 0.1687311288560894 3 [HV]NN{M(Oxidation (M))|F}P{I|L}R 8 4 [HV]NN + + 17.217 2.9634 0.63838 1.7294 1.7294 48.661 0.0 0.0 0.0 0.0 6.516061991826028 0.0 0.0 0 0.5 0.0 0.0 0.5138793319624578 [HV]NN{M(Oxidation (M))|F}P{I|L}R 1.7294 - 101 + 1 1.356 109618.8 1.0 6141 5372 11497 HBL1_DMSO_200M_050219_1,11515 HBL1_DMSO_200M_050219_1,11515,GVHGNFPRL False True GVHGNFPRL 59.457891 332.850268542767 4741450.5 11497.0 ENSG00000071794|ENST00000310053|HLTF;;ENST00000481663.1_1_3:148801501-148804285:-|nuORF 4.192972660064697 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11516 59.463 274.0 520400.0 25 0 45121.0 + 9810 FPAVVKNV 8 140 437.2631055159436 872.5116580986871 2 437.2634155154228 MULTI CID FTMS 0 0 0 11497 241489.90625 0.3804345760561759 1 -0.0752716064453125 19 Unmodified _FPAVVKNV_ ENSG00000103723|ENST00000535359|AP3B2;ENSG00000132842|ENST00000255194|AP3B1;ENST00000535385.5_1_15:83357894-83378458:-|nuORF;ENST00000535513.1_1_15:83357409-83378458:-|nuORF;ENST00000561455.5_1_15:83355747-83377528:-|nuORF;nc|ENSG00000103723|Q13367-3|AP3B2;nc|ENSG00000103723|Q13367|AP3B2;nc|ENSG00000132842|O00203-3|AP3B1 127.53666659039838 8.530569911105416e-05 3 {M(Oxidation (M))|F}PAVVKNV 8 0 + 76.627 0.0 0.0 8.7824 8.7824 95.788 0.0 0.0 0.0 45.43686536267198 12.12241759892163 12.12241759892163 12.149392758355162 0 1.1307196863200843 0.0 0.0 1.843322544373148 + + {M(Oxidation (M))|F}PAVVKNV;{M(Oxidation (M))|F}PAVVKGGV;{M(Oxidation (M))|F}V[PA]VKNV;{M(Oxidation (M))|F}V[PA]VKGGV;[DV]K[RK]VE;{[QV]|[N{I|L}]|[RA]|[KV]}D[RK]VE;{[VA]|[{I|L}G]}[TA][RK]VE;{M(Oxidation (M))|F}V[KG][{I|L}P]NV;{M(Oxidation (M))|F}V{I|L}V[WP]{I|L};{M(Oxidation (M))|F}V{I|L}V[W{I|L}]P 8.7824;7.3899;6.1217;4.7292;3.1175;2.9056;2.4467;2.3458;1.9856;1.7489 +;-;-;-;-;-;-;-;-;- + 911 + 1 1.356 112790.4 1.0 6142 5372 11497 HBL1_DMSO_200M_050219_1,11516 HBL1_DMSO_200M_050219_1,11516,FPAVVKNV True True FPAVVKNV 59.462941 437.263415515423 15802362.0 11497.0 ENST00000535513.1_1_15:83357409-83378458:-|nuORF;;ENSG00000103723|ENST00000535359|AP3B2;;nc|ENSG00000132842|O00203-3|AP3B1;;nc|ENSG00000103723|Q13367|AP3B2;;ENSG00000132842|ENST00000255194|AP3B1;;nc|ENSG00000103723|Q13367-3|AP3B2;;ENST00000535385.5_1_15:83357894-83378458:-|nuORF;;ENST00000561455.5_1_15:83355747-83377528:-|nuORF 5.532057921091716 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11517 59.477 766.0 140700.0 25 0 7573.4 + -1 WCGRVATITV 10 163 581.8070732072198 1161.5995934812397 2 581.8077270388603 MULTI CID FTMS 0 0 0 11497 251303.78125 0.2297280658933915 2 -0.1989936828613281 20 Carbamidomethyl (C) _WC(Carbamidomethyl (C))GRVATITV_ REV__ENST00000435074.5_1_6:33080250-33086274:+|nuORF 31.26834338654808 0.266153677697784 3 [SG]SDA{I|L}R{I|L}GSTV 12 -1 + 76.716 0.0 0.0 6.6044 6.6044 83.783 0.0 0.0 0.0 16.197887582883936 59.45412746179204 16.197887582883936 3.6991128507179374 0 2.9489700043360187 0.9208187539523752 1.6237125054200234 0.0 [SG]SDA{I|L}R{I|L}GSTV;[SG]SDA{I|L}R[SG]{I|L}TV;[SG]SDA{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;[SG]SDA{I|L}R[KT]EV;[SG]SDA{I|L}R{I|L}T[SG]V;{[CA]|SS}GDA{I|L}R{I|L}GSTV;[WC(Carbamidomethyl (C))]A{I|L}R{I|L}GSTV;{[CA]|SS}GDA{I|L}R[SG]{I|L}TV;{[CA]|SS}GDA{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;[WC(Carbamidomethyl (C))]A{I|L}R[SG]{I|L}TV 6.6044;6.2859;5.9759;5.0502;4.9127;4.773;4.4551;4.4545;4.1445;4.1366 -;-;-;-;-;-;-;-;-;- 736 1 1.356 85839.2 1.0 6143 5372 11497 HBL1_DMSO_200M_050219_1,11517 HBL1_DMSO_200M_050219_1,11517,WCGRVATITV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11519 59.482 26.0 1823800.0 25 0 337770.0 + 4457 DAYALNHTL 9 94 509.25362910442976 1016.4927052756595 2 509.2538635134697 MULTI CID FTMS 0 0 0 11518 1743926.25 0.0053087138198288 6 -0.5772171020507812 1 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 51.629811660486645 0.0367964933207742 3 {[DA]|[EG]}YA{I|L}N[HT]{I|L} 9 0 + 67.483 0.0 0.0 6.6388 6.6388 89.764 0.0 0.0 0.0 39.947274948966935 16.790521660407123 16.790521660407123 9.208187539523747 0 1.1307196863200843 1.6989700043360187 1.7302046884880935 0.0 + + {[DA]|[EG]}YA{I|L}N[HT]{I|L};{[DA]|[EG]}YA{I|L}GG[HT]{I|L};{[DA]|[EG]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SN[HT]{I|L};[HN]{I|L}TA[KC][KC];[HT]{I|L}NA[KC][KC];[HN]{I|L}AT[KC][KC];[HT]{I|L}GGA[KC][KC] 6.6388;5.7329;2.9158;1.8804;1.824;0.95696;0.68232 +;-;-;-;-;-;- + 176 + 1 1.37 43445.6 1.0 6144 5373 11518 HBL1_DMSO_200M_050219_1,11519 HBL1_DMSO_200M_050219_1,11519,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11520 59.483 48.0 1486100.0 25 0 233940.0 + 3313 AYLEAHETF 9 85 540.7537171841545 1079.492881435109 2 540.7537719607353 MULTI CID FTMS 0 0 0 11518 1033758.625 0.4299768968633889 2 -0.2190437316894531 2 Unmodified _AYLEAHETF_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107 70.71552829651908 0.0208223590022201 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}MT{I|L}T{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 9 6 + 64.116 0.0 0.0 5.9395 5.9395 75.61 0.0 0.0 0.0 0.0476406049482847 4.242340564755267 0.0476406049482847 0.0476406049482847 0 0.7742275032520141 2.0 0.75 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}MT{I|L}T{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}ADS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}WS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}MTT{I|L}{M(Oxidation (M))|F}S{M(Oxidation (M))|F};[HA]ET{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}DT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}DS{M(Oxidation (M))|F};[HA]EE{I|L}T{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}E[HV]DS{M(Oxidation (M))|F};{[YC]|[HE]}AT{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}DT;[HA]EET{I|L}{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 5.9395;5.9351;5.7769;5.6647;5.5465;5.489;5.2223;5.1529;4.9888;4.9475 -;-;-;-;-;-;-;-;-;- 1125 1 1.37 57221.9 1.0 6145 5373 11518 HBL1_DMSO_200M_050219_1,11520 HBL1_DMSO_200M_050219_1,11520,AYLEAHETF True True AYLEAHETF 59.483098 540.753771960735 37534920.0 11518.0 ENSG00000111581|ENST00000229179|NUP107;;nc|ENSG00000111581|P57740-3|NUP107;;nc|ENSG00000111581|P57740-2|NUP107 7.235024611155192 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11521 59.484 5.3 12303000.0 25 0 745950.0 + 38194 TPRHIIVRF 9 96 380.2327568163181 1137.6764410491542 3 380.2323791384697 MULTI CID FTMS 0 0 0 11518 6168732.0 0.4867113891468034 -1 0.0752716064453125 3 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 35.61225514009592 0.0995432151795903 3 [RP]TH{I|L}{I|L}VR{M(Oxidation (M))|F} 9 2 [RP]TH + + 31.472 1.4267 0.29041 2.7664 2.7664 49.755 0.0 0.0 0.0 0.0 10.089869102636158 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.6307196863200843 [RP]TH{I|L}{I|L}VR{M(Oxidation (M))|F} 2.7664 - 114 + 1 1.37 59025.2 1.0 6146 5373 11518 HBL1_DMSO_200M_050219_1,11521 HBL1_DMSO_200M_050219_1,11521,TPRHIIVRF True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11522 59.485 25.0 2558700.0 25 0 258280.0 + 1869 ALVQDLAKA 9 91 464.7767903161839 927.5390276991678 2 464.7768737673759 MULTI CID FTMS 0 0 0 11518 1595471.75 1.0 0 0.0 4 Unmodified _ALVQDLAKA_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 53.832793166522166 0.0319663582346103 3 [{I|L}A]VQD{I|L}AKA 9 0 + 72.176 0.0 0.0 7.7814 7.7814 92.76 0.0 0.0 0.0 46.940320869257775 12.562120971232176 12.562120971232176 9.208187539523747 0 1.079689690656103 2.0 0.0 0.6307196863200843 + + [{I|L}A]VQD{I|L}AKA;[{I|L}A]V[AG]D{I|L}AKA 7.7814;6.7887 +;- + 465 + 1 1.37 56051.3 1.0 6147 5373 11518 HBL1_DMSO_200M_050219_1,11522 HBL1_DMSO_200M_050219_1,11522,ALVQDLAKA True True ALVQDLAKA 59.485454 464.776873767376 11907633.0 11518.0 ENSG00000134057|ENST00000256442|CCNB1;;nc|ENSG00000134057|P14635-2|CCNB1 6.159471193949382 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11523 59.487 62.0 958620.0 25 0 78957.0 + 32357 RYPGYMNNDL 10 78 621.7826079338688 1241.5506629345375 2 621.7826415896416 MULTI CID FTMS 0 0 0 11518 930797.75 0.7910973708463809 1 -0.1237220764160156 5 Unmodified _RYPGYMNNDL_ ENSG00000037042|ENST00000251412|TUBG2;ENSG00000131462|ENST00000251413|TUBG1 55.50274090549119 0.048383292844968 3 [YR]PGYMNND{I|L} 10 0 + 89.954 0.0 0.0 7.2453 7.2453 89.695 0.0 0.0 0.0 25.607346925073955 46.22531503818102 25.607346925073955 7.7815125038364386 0 0.8494850021680094 1.6989700043360187 0.0 0.7302046884880937 + + [YR]PGYMNND{I|L};[YR]PG{M(Oxidation (M))|F}{M(Oxidation (M))|F}NND{I|L};[YR]PGYMGGND{I|L};[YR]PGYMNGGD{I|L};[YR]PG{M(Oxidation (M))|F}{M(Oxidation (M))|F}NGGD{I|L};[YR]PG{M(Oxidation (M))|F}{M(Oxidation (M))|F}GGND{I|L};[YR]PGYMGGGGD{I|L};[YR]PG{M(Oxidation (M))|F}{M(Oxidation (M))|F}GGGGD{I|L};[{M(Oxidation (M))|F}V]NNMYGP{[MG]|[TS]}{I|L};[PG]YRYMNND{I|L} 7.2453;6.6185;6.5071;6.5071;5.8804;5.8804;5.7719;5.1451;4.3903;4.2976 +;-;-;-;-;-;-;-;-;- + 602 1 1.37 50700.0 1.0 6148 5373 11518 HBL1_DMSO_200M_050219_1,11523 HBL1_DMSO_200M_050219_1,11523,RYPGYMNNDL True True RYPGYMNNDL 59.486991 621.782641589642 24458490.0 11518.0 ENSG00000037042|ENST00000251412|TUBG2;;ENSG00000131462|ENST00000251413|TUBG1 9.19095547993978 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11524 59.488 51.0 835480.0 25 0 89524.0 -1 QLSEGLGMTC 10 86 548.2436203391813 1094.4726877451626 2 548.2442504763603 MULTI CID FTMS 0 0 0 11518 508603.65625 1.0 0 0.0 6 Carbamidomethyl (C) _QLSEGLGMTC(Carbamidomethyl (C))_ ENST00000296490.7_1_3:52290064-52290199:-|nuORF 12.240655878213236 0.6421556946785427 3 [Q{I|L}]DSA 5 -1 12.307 0.0 0.0 1.1245 0.0 0.0 0.0 577.2126529153376 577.2126529153376 1.4696758944969002 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 [Q{I|L}]DSA 1.1245 - 171 1 1.37 40219.3 1.0 6149 5373 11518 HBL1_DMSO_200M_050219_1,11524 HBL1_DMSO_200M_050219_1,11524,QLSEGLGMTC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11525 59.49 66.0 1031000.0 25 0 89807.0 + 21045 LPADIKESI 9 114 493.28213170038725 984.5497104675744 2 493.2824890017509 MULTI CID FTMS 0 0 0 11518 509056.34375 0.3816094311191098 2 -0.2190437316894531 7 Unmodified _LPADIKESI_ ENSG00000165630|ENST00000378572|PRPF18 23.78978130925829 0.2284941198415988 3 {I|L}PAD{I|L}H 6 4 63.053 0.0 0.0 6.4042 0.0 0.0 0.0 335.17148767642817 335.17148767642817 44.52221194474205 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.0 {I|L}PAD{I|L}H 6.4042 - 564 + 1 1.37 58219.2 1.0 6150 5373 11518 HBL1_DMSO_200M_050219_1,11525 HBL1_DMSO_200M_050219_1,11525,LPADIKESI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11526 59.493 132.0 418500.0 25 0 83633.0 + 24934 MPPPPGPAL 9 77 438.7355677044302 875.4565824756604 2 438.7357360720634 MULTI CID FTMS 0 0 0 11518 409148.8125 0.7014733726732767 -1 0.0752716064453125 8 Unmodified _MPPPPGPAL_ ENSG00000119596|ENST00000325680|YLPM1;nc|ENSG00000119596|P49750-1|YLPM1;nc|ENSG00000119596|P49750-3|YLPM1 67.41302359171755 0.0220989861905124 3 {M(Oxidation (M))|F}AW 3 7 26.7 0.0 0.0 3.0498 0.0 0.0 453.2575295965573 0.0 453.2575295965573 0.0 3.502453554212874 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 {M(Oxidation (M))|F}AW 3.0498 - 224 + 1 1.37 49571.4 1.0 6151 5373 11518 HBL1_DMSO_200M_050219_1,11526 HBL1_DMSO_200M_050219_1,11526,MPPPPGPAL True True MPPPPGPAL 59.492608 438.735736072063 9079320.0 11518.0 nc|ENSG00000119596|P49750-3|YLPM1;;nc|ENSG00000119596|P49750-1|YLPM1;;ENSG00000119596|ENST00000325680|YLPM1 4.704785346984863 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11527 59.497 243.0 386640.0 25 0 27007.0 -1 YLFYCKNCRFY 11 99 788.8548433852268 1575.6951338372537 2 788.8549072146416 MULTI CID FTMS 0 0 0 11518 401846.53125 0.4385264753027991 -1 0.0752716064453125 9 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 3 {[QN]|[E{I|L}]|[KN]}A[YK]MAQQNA{M(Oxidation (M))|F}Y 13 -1 + 78.763 0.0 0.0 4.9986 4.9986 78.158 0.0 0.0 0.0 11.567436027002811 32.325095462247546 11.567436027002811 3.4948500216800937 0 0.7429928190999391 0.0 0.2215141619232908 2.865356566548286 {[QN]|[E{I|L}]|[KN]}A[YK]MAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SMAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SMAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SMAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SMA[AG]QNA{M(Oxidation (M))|F}Y;[HS][RH]SMAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}HHEAQQNA{M(Oxidation (M))|F}Y 4.9986;4.7768;4.4229;4.4229;4.4229;4.2011;4.2011;4.2011;3.9544;3.8647 -;-;-;-;-;-;-;-;-;- 3826 1 1.37 69570.0 1.0 6152 5373 11518 HBL1_DMSO_200M_050219_1,11527 HBL1_DMSO_200M_050219_1,11527,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11528 59.501 208.0 340740.0 25 0 43319.0 + 21852 LPPEIQARV 9 93 511.8033971844494 1021.5922414356988 2 511.8030883669853 MULTI CID FTMS 0 0 0 11518 324780.09375 0.5843585555446227 -5 0.4856376647949219 10 Unmodified _LPPEIQARV_ ENSG00000099326|ENST00000215057|MZF1;ENSG00000103343|ENST00000268655|ZNF174;ENST00000600048.1_1_19:59082132-59084077:-|nuORF;nc|ENSG00000099326|P28698-3|MZF1;nc|ENSG00000103343|Q15697-2|ZNF174 22.736283301280096 0.2418982879461534 3 {I|L}PPE{I|L} 5 4 59.196 0.0 0.0 5.7945 0.0 0.0 0.0 469.2526949518188 469.2526949518188 42.76831942102902 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPE{I|L} 5.7945 + + 183 + 1 1.37 62241.7 1.0 6153 5373 11518 HBL1_DMSO_200M_050219_1,11528 HBL1_DMSO_200M_050219_1,11528,LPPEIQARV False True LPPEIQARV 59.501137 511.803088366985 10558607.0 11518.0 ENSG00000099326|ENST00000215057|MZF1;;ENSG00000103343|ENST00000268655|ZNF174;;ENST00000600048.1_1_19:59082132-59084077:-|nuORF;;nc|ENSG00000099326|P28698-3|MZF1;;nc|ENSG00000103343|Q15697-2|ZNF174 4.671932220458984 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11529 59.513 669.0 328030.0 25 0 26293.0 -1 FYEWECKQRMR 11 138 824.8709748356142 1647.7273967380283 2 825.3725463747978 MULTI CID FTMS 0 0 0 11518 329448.75 0.5709517346169182 -2 0.227813720703125 11 Carbamidomethyl (C),Oxidation (M) _FYEWEC(Carbamidomethyl (C))KQRM(Oxidation (M))R_ ENSG00000120658|ENST00000690772|ENOX1;nc|ENSG00000120658|Q8TC92-2|ENOX1 1.4819007175156935 0.86815623132643 3 [QA]HDEAQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 14 -1 + 66.501 0.0 0.0 4.0359 4.0359 69.689 0.0 0.0 0.0 0.407057127514534 35.05492141022007 0.407057127514534 0.2996322337744317 0 0.7742275032520141 0.0 0.75 1.4337955442476158 [QA]HDEAQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[QA]HDEAQGANA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[QA]HDEAGAQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[QA]HDEAGAGANA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}Y[WM]AQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[QA]HDEQAQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}Y[WM]AGANA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[QA]HDEQAGANA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[YQ][C(Carbamidomethyl (C))K]EAQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[YQ][C(Carbamidomethyl (C))K]EAGANA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 4.0359;4.0177;3.9697;3.9527;3.8671;3.8532;3.8476;3.835;3.7732;3.7537 -;-;-;-;-;-;-;-;-;- 9875 1 1.37 153805.4 1.0 6154 5373 11518 HBL1_DMSO_200M_050219_1,11529 HBL1_DMSO_200M_050219_1,11529,FYEWECKQRMR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11530 59.517 199.0 459370.0 25 0 32071.0 + 44994 YPSLPAQQV 9 124 501.76605667706673 1001.5175604209336 2 501.7670165896416 MULTI CID FTMS 0 0 0 11518 295417.59375 0.2236529737534753 -5 0.4856376647949219 12 Unmodified _YPSLPAQQV_ ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF 78.14939416004806 0.0179651292570206 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}PAQ{I|L}N 9 5 + 52.003 0.0 0.0 5.1924 5.1924 76.787 0.0 0.0 0.0 2.270355800900461 4.776610300746 2.270355800900461 2.270355800900461 0 0.56636671354162 1.3010299956639813 1.4604093769761874 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}PAQ{I|L}N;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}PAQ{I|L}N;{[TV]|[{I|L}S]}PYPAQ{I|L}N;[AG]VSQVSQ{I|L}N;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}PA[AG]{I|L}N;[PS]Y{I|L}PAQ{I|L}N;[{I|L}P]SYPAQ{I|L}N;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}PA[AG]{I|L}N;{[TV]|[{I|L}S]}NQVSQ{I|L}N;{[TV]|[{I|L}S]}PYPA[AG]{I|L}N 5.1924;4.9657;4.7938;4.6724;4.273;4.1412;4.1155;4.0463;3.9973;3.8744 -;-;-;-;-;-;-;-;-;- 1598 1 1.37 76066.7 1.0 6155 5373 11518 HBL1_DMSO_200M_050219_1,11530 HBL1_DMSO_200M_050219_1,11530,YPSLPAQQV True True YPSLPAQQV 59.516604 501.767016589642 33261138.0 11518.0 ENSG00000137265|ENST00000380956|IRF4;;ENST00000495137.5_1_6:394829-397293:+|nuORF 6.387518564860026 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11531 59.524 395.0 559780.0 25 0 47235.0 + -1 EPSLICSC 8 195 483.2065771547889 964.398601376378 2 483.2069885134697 MULTI CID FTMS 0 0 0 11518 290231.90625 0.0661435789724373 -5 0.4856376647949219 13 2 Carbamidomethyl (C) _EPSLIC(Carbamidomethyl (C))SC(Carbamidomethyl (C))_ REV__ENST00000367409.8_1_1:197061115-197062200:-|nuORF 19.438996006549623 0.6237395211498085 3 [EP]S{I|L}G 5 -1 34.306 0.0 0.0 3.5572 0.0 0.0 0.0 478.1479049254592 478.1479049254592 3.0957291758889127 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.9247425010840048 0.0 [EP]S{I|L}G 3.5572 - 622 1 1.37 167810.4 1.0 6156 5373 11518 HBL1_DMSO_200M_050219_1,11531 HBL1_DMSO_200M_050219_1,11531,EPSLICSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11532 59.535 654.0 276020.0 25 0 30168.0 + 16840 KIATEKDFLEA 11 166 632.8437547068938 1263.6729564805876 2 632.8427001833916 MULTI CID FTMS 0 0 0 11518 276125.8125 1.0 0 0.0 14 Unmodified _KIATEKDFLEA_ ENSG00000161057|ENST00000292644|PSMC2;nc|ENSG00000161057|P35998-2|PSMC2 55.46719626686468 0.0875413064047199 3 K{I|L}A{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[SA]|[TG]}[PA]EA 12 7 + 71.728 0.0 0.0 5.6761 5.6761 80.674 0.0 0.0 0.0 8.402309465744544 3.608240047760802 3.608240047760802 3.608240047760802 0 1.960409376976188 0.8239087409443188 1.5994850021680094 0.0 K{I|L}A{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[SA]|[TG]}[PA]EA;K{I|L}A{M(Oxidation (M))|F}ATEKDNK;K{I|L}A{M(Oxidation (M))|F}AT[VS]PYPA;K{I|L}A{M(Oxidation (M))|F}AH[{I|L}P][PA]EA;K{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[SA]|[TG]}[PA]EA;[K{I|L}]ATED{M(Oxidation (M))|F}K{I|L}EA;K{I|L}A{M(Oxidation (M))|F}ATEKY{[HG]|PP};K{I|L}A{M(Oxidation (M))|F}ATNP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K;K{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}D[KG][EP]{I|L};K{I|L}A{M(Oxidation (M))|F}ATWPYPA 5.6761;5.3906;5.2154;5.2052;5.0342;5.0112;4.9493;4.9363;4.9207;4.9092 -;-;-;-;-;-;-;-;-;- 12856 + 1 1.37 145136.0 1.0 6157 5373 11518 HBL1_DMSO_200M_050219_1,11532 HBL1_DMSO_200M_050219_1,11532,KIATEKDFLEA True True KIATEKDFLEA 59.535077 632.842700183392 2603334.75 11518.0 nc|ENSG00000161057|P35998-2|PSMC2;;ENSG00000161057|ENST00000292644|PSMC2 6.816120147705078 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11533 59.54 282.0 316820.0 25 0 28445.0 + 10211 FQILYYIFL 9 114 407.2286648990348 0 407.2286254763603 PEAK CID FTMS 0 0 0 11518 276666.65625 1.0 0 0.0 15 Unmodified _FQILYYIFL_ REV__ENSG00000188921|ENST00000495827|HACD4 18.13498045792455 0.2189554373504223 3 Q 1 -1 7.2185 0.0 0.0 0.88849 0.0 0.0 565.3103286000244 116.05094324283436 681.3612718428587 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 Q 0.88849 + + 50 + 1 1.37 70683.3 1.0 6158 5373 11518 HBL1_DMSO_200M_050219_1,11533 HBL1_DMSO_200M_050219_1,11533,FQILYYIFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11534 59.545 161.0 551130.0 25 0 109070.0 + 9826 FPEEEWRHV 9 81 410.1963560907189 1227.5672388723565 3 410.1962768435478 MULTI CID FTMS 0 0 0 11518 183733.421875 0.2295049584179904 -5 0.4856376647949219 16 Unmodified _FPEEEWRHV_ ENSG00000197037|ENST00000394152|ZSCAN25;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 39.94969957227396 0.0757326808254658 3 {M(Oxidation (M))|F}PEEEWRHV 9 0 + 52.634 0.0 0.0 4.2877 4.2877 84.124 0.0 0.0 0.0 30.86319773215088 7.324025793069708 7.324025793069708 14.212819689744975 0 0.0 0.0 0.805462187404089 0.0 + + {M(Oxidation (M))|F}PEEEWRHV;[EP]E[K{I|L}][HC]{M(Oxidation (M))|F}PE;{M(Oxidation (M))|F}PEE[K{I|L}]{[MG]|[TS]}{M(Oxidation (M))|F}M;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[HC]W[VG]HV;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[WQ]{[{M(Oxidation (M))|F}D]|MM}{[QN]|[E{I|L}]|[KN]};{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[WQ][HM]HV;[YV][HC]EWRHV;[YV]E[HC]WRHV 4.2877;3.1299;3.0327;1.354;1.1721;1.0671;0.92363;0.6784 +;-;-;-;-;-;-;- + 192 + 1 1.37 74906.4 1.0 6159 5373 11518 HBL1_DMSO_200M_050219_1,11534 HBL1_DMSO_200M_050219_1,11534,FPEEEWRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11535 59.558 800.0 141100.0 25 0 14913.0 + -1 EDCLVYCCWH 10 141 692.7588688978426 1383.503184862485 2 692.7584716677666 MULTI CID FTMS 0 0 0 11518 192633.734375 1.0 0 0.0 17 2 Carbamidomethyl (C) _EDC(Carbamidomethyl (C))LVYC(Carbamidomethyl (C))CWH_ REV__ENSG00000169884|ENST00000301061|WNT10B 1.844237919475145 0.7181058121064529 3 YMDASS 6 -1 36.873 0.0 0.0 2.6652 0.0 0.0 320.1609909867205 406.0822542779906 726.2432452647112 0.0 0.0 0.0 0.0 0 0.0 0.0 1.024227503252014 0.0 YMDASS 2.6652 - 270 + 1 1.37 85204.1 0.9100000262260436 6160 5373 11518 HBL1_DMSO_200M_050219_1,11535 HBL1_DMSO_200M_050219_1,11535,EDCLVYCCWH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11536 59.572 800.0 154370.0 25 0 9626.0 + -1 FRQILKNPDDPDMVD 15 132 601.6296867055912 1801.8672307169736 3 601.6297485232353 MULTI CID FTMS 0 0 0 11518 160264.78125 1.0 0 0.0 18 P20930;ENSG00000143631|ENST00000368799|FLG 3 EMQAR[DP]MVD 10 -1 41.687 0.0 0.0 2.3135 0.0 0.0 611.340135642775 0.0 611.340135642775 0.0 22.25009480581832 0.0 0.0 0 0.6989700043360187 0.0 0.8494850021680094 0.4247425010840047 EMQAR[DP]MVD 2.3135 - 1221 1 1.37 99488.7 0.9200000166893004 6161 5373 11518 HBL1_DMSO_200M_050219_1,11536 HBL1_DMSO_200M_050219_1,11536, False False FRQILKNPDDPDMVD 59.57227 601.629748523235 1407242.0 11518.0 P20930;;ENSG00000143631|ENST00000368799|FLG 4.088829517364502 3.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11537 59.586 800.0 216150.0 25 0 15757.0 -1 SIYNNCSPV 9 204 527.2362689072088 0 527.2347900271416 PEAK CID FTMS 0 0 0 11518 144161.5 0.781645801793162 5 -0.5289955139160156 19 Carbamidomethyl (C) _SIYNNC(Carbamidomethyl (C))SPV_ ENSG00000198881|ENST00000362002|ASB12;nc|ENSG00000198881|Q8WXK4|ASB12 23.1484247019978 0.1725298825155634 3 VEW 3 -1 17.722 0.0 0.0 1.6838 0.0 0.0 218.123379563778 417.1316012018188 635.2549807655968 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.7302046884880937 0.0 VEW 1.6838 - 548 + 1 1.37 136997.3 0.8500000238418579 6162 5373 11518 HBL1_DMSO_200M_050219_1,11537 HBL1_DMSO_200M_050219_1,11537,SIYNNCSPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11538 59.601 800.0 167880.0 25 0 10019.0 + 34717 SPYERQLNL 9 183 560.2937270949519 1118.5729012567035 2 560.2941772341728 MULTI CID FTMS 0 0 0 11518 147555.203125 0.6686379622894747 1 -0.1237220764160156 20 Unmodified _SPYERQLNL_ ENSG00000182173|ENST00000333213|TSEN54 24.99096001346401 0.2132109383330889 3 SPYE 4 5 49.143 0.0 0.0 4.3934 0.0 0.0 0.0 639.3581026666624 639.3581026666624 27.392341654251897 0.0 0.0 0.0 0 0.4194451763165202 1.3010299956639813 0.0 0.0 + SPYE 4.3934 + + 1592 + 1 1.37 103975.3 0.8799999952316284 6163 5373 11518 HBL1_DMSO_200M_050219_1,11538 HBL1_DMSO_200M_050219_1,11538,SPYERQLNL False True SPYERQLNL 59.601108 560.294177234173 1794086.125 11518.0 ENSG00000182173|ENST00000333213|TSEN54 4.56326421101888 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11540 59.606 13.0 4199100.0 25 0 349580.0 + 7555 EIIRQLNGV 9 94 521.3064159567566 1040.5982789803131 2 521.3065673708916 MULTI CID FTMS 0 0 0 11539 3539892.5 0.5234961911907556 1 -0.0953216552734375 1 Unmodified _EIIRQLNGV_ ENST00000513761.5_1_4:170542142-170557087:+|nuORF 96.28474662873226 0.0124266067997264 3 {[QN]|[E{I|L}]|[KN]}PTRRNG 8 5 38.408 0.0 0.0 3.691 0.0 0.0 0.0 114.05659662418202 114.05659662418202 14.634928107446186 0.0 0.0 0.0 0 1.0114393726401687 2.0 0.2742275032520141 0.7302046884880937 {[QN]|[E{I|L}]|[KN]}PTRRNG 3.691 - 305 + 1 1.366 49227.3 1.0 6164 5374 11539 HBL1_DMSO_200M_050219_1,11540 HBL1_DMSO_200M_050219_1,11540,EIIRQLNGV True True EIIRQLNGV 59.605528 521.306567370892 47056628.0 11539.0 ENST00000513761.5_1_4:170542142-170557087:+|nuORF 9.288873036702476 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11541 59.607 15.0 3218100.0 25 0 421690.0 + 1376 ALAEKFKEL 9 72 524.8053008176081 1047.596048702016 2 524.8055297732353 MULTI CID FTMS 0 0 0 11539 3827709.5 0.6230571934384559 1 -0.0953216552734375 2 Unmodified _ALAEKFKEL_ ENSG00000124541|ENST00000244496|RRP36;nc|ENSG00000124541|Q96EU6-2|RRP36 43.77239144664712 0.0547478964384323 3 A{I|L}AEK{M(Oxidation (M))|F} 6 3 80.266 0.0 0.0 7.6619 0.0 0.0 0.0 385.2096956842407 385.2096956842407 49.57371172794112 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.7614393726401688 0.0 + A{I|L}AEK{M(Oxidation (M))|F} 7.6619 + + 408 + 1 1.366 43022.7 1.0 6165 5374 11539 HBL1_DMSO_200M_050219_1,11541 HBL1_DMSO_200M_050219_1,11541,ALAEKFKEL True True ALAEKFKEL 59.606707 524.805529773235 213699020.0 11539.0 nc|ENSG00000124541|Q96EU6-2|RRP36;;ENSG00000124541|ENST00000244496|RRP36 5.356513341267903 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11542 59.608 16.0 6218400.0 25 0 857670.0 + 4545 DAYPQRIKF 9 94 569.3062943990119 1136.5980358648235 2 569.3062621951103 MULTI CID FTMS 0 0 0 11539 2708102.5 1.0 0 0.0 3 Unmodified _DAYPQRIKF_ ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13753187-13770868:+|nuORF;nc|ENSG00000046651|O75665-2|OFD1;nc|ENSG00000046651|O75665-3|OFD1 24.881564428377168 0.2146028316269493 3 {[DA]|[EG]}YP 4 5 33.293 0.0 0.0 2.9292 0.0 0.0 0.0 687.3952640876969 687.3952640876969 20.26394473861056 0.0 0.0 0.0 0 0.7887254899964358 1.3979400086720375 0.0 0.0 + {[DA]|[EG]}YP 2.9292 + + 40 + 1 1.366 76570.8 1.0 6166 5374 11539 HBL1_DMSO_200M_050219_1,11542 HBL1_DMSO_200M_050219_1,11542,DAYPQRIKF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11543 59.609 26.0 2242500.0 25 0 311990.0 + 1378 ALAEKFKEL 9 87 350.2063430724648 1047.5971998175944 3 350.2058593630791 MULTI CID FTMS 0 0 0 11539 2020073.125 0.5124790473105686 1 -0.0953216552734375 4 Unmodified _ALAEKFKEL_ ENSG00000124541|ENST00000244496|RRP36;nc|ENSG00000124541|Q96EU6-2|RRP36 26.268140514670165 0.1969607489560049 3 [{I|L}A]AEK{M(Oxidation (M))|F} 6 3 53.645 0.0 0.0 5.1208 0.0 0.0 0.0 385.20957361392817 385.20957361392817 41.1709124234504 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3807196863200844 + [{I|L}A]AEK{M(Oxidation (M))|F} 5.1208 + + 145 + 1 1.366 50550.2 1.0 6167 5374 11539 HBL1_DMSO_200M_050219_1,11543 HBL1_DMSO_200M_050219_1,11543,ALAEKFKEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11544 59.612 143.0 600060.0 25 0 67565.0 + 38959 TVPDEIQEV 9 115 515.2586523337754 1028.5027517343508 2 515.2585937380791 MULTI CID FTMS 0 0 0 11539 703194.6875 0.658408583439429 1 -0.0953216552734375 5 Unmodified _TVPDEIQEV_ ENSG00000103657|ENST00000443617|HERC1;ENST00000560519.1_1_15:64026898-64041594:-|nuORF 46.020951573049366 0.0490941689151868 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}VQ[HA]EV 9 5 + 64.089 0.0 0.0 6.2313 6.2313 84.7 0.0 0.0 0.0 35.48332479720627 5.157942671832316 5.157942671832316 5.55462187404089 0 0.3807196863200844 2.0 1.0114393726401687 0.3054621874040891 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}VQ[HA]EV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[HA]QEV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VQY{[CA]|SS}V;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VQ[HA]D{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[AG][HA]EV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VQYC(Carbamidomethyl (C)){I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[HA]QD{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[AG]Y{[CA]|SS}V;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[HA][AG]EV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{[CA]|SS}[YQ]V 6.2313;5.6912;5.497;5.2188;5.039;4.8877;4.6787;4.3047;4.1827;4.0548 -;-;-;-;-;-;-;-;-;- 1320 + 1 1.366 71430.0 1.0 6168 5374 11539 HBL1_DMSO_200M_050219_1,11544 HBL1_DMSO_200M_050219_1,11544,TVPDEIQEV True True TVPDEIQEV 59.611945 515.258593738079 10284276.0 11539.0 ENSG00000103657|ENST00000443617|HERC1;;ENST00000560519.1_1_15:64026898-64041594:-|nuORF 3.309033234914144 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11545 59.614 120.0 643880.0 25 0 100760.0 + 15175 IPDGGVHIV 9 86 453.755956422724 905.497359912248 2 453.7556335330009 MULTI CID FTMS 0 0 0 11539 670503.875 0.9007717641590292 3 -0.2755050659179687 6 Unmodified _IPDGGVHIV_ ENSG00000244462|ENST00000374114|RBM12;ENST00000352393.8_2_20:34220804-34246883:-|nuORF;ENST00000440240.5_1_20:34220804-34252800:-|nuORF;ENST00000454607.5_1_20:34220607-34246883:-|nuORF 38.15118350030904 0.0856056900103839 3 {I|L}PD{[NV]|[RG]}HV{I|L} 8 4 + 59.779 0.0 0.0 6.6018 6.6018 80.234 0.0 0.0 0.0 31.638568026386693 1.5847461167923529 1.5847461167923529 1.5847461167923529 0 1.1989700043360187 1.5228787452803376 0.4247425010840047 0.0 {I|L}PD{[NV]|[RG]}HV{I|L};{I|L}PD{[NV]|[RG]}H{I|L}V;[DP]{[NV]|[RG]}H{I|L}V{I|L};{I|L}[RN][YE]V{I|L};{I|L}[RN][YE]{I|L}V;[H{I|L}]{[NV]|[RG]}DPV{I|L} 6.6018;6.4268;4.3206;2.8359;2.6609;2.3372 -;-;-;-;-;- 115 + 1 1.366 64548.1 1.0 6169 5374 11539 HBL1_DMSO_200M_050219_1,11545 HBL1_DMSO_200M_050219_1,11545,IPDGGVHIV True True IPDGGVHIV 59.614426 453.755633533001 23612290.0 11539.0 ENST00000454607.5_1_20:34220607-34246883:-|nuORF;;ENST00000440240.5_1_20:34220804-34252800:-|nuORF;;ENSG00000244462|ENST00000374114|RBM12;;ENST00000352393.8_2_20:34220804-34246883:-|nuORF 3.804962158203125 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11546 59.616 75.0 604710.0 25 0 96809.0 + 2934 AVHDSFVAV 9 65 472.7454644160763 943.4763758989526 2 472.7451354861259 MULTI CID FTMS 0 0 0 11539 605815.5 0.5147615220933722 -2 0.1989936828613281 7 Unmodified _AVHDSFVAV_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 60.38955033654506 0.025866396858536 3 {[VA]|[{I|L}G]}HDS{M(Oxidation (M))|F}VAV 9 0 + 72.445 0.0 0.0 7.6785 7.6785 90.025 0.0 0.0 0.0 16.901552601841594 61.18566936842118 16.901552601841594 6.817496819840656 0 0.4247425010840047 1.3979400086720375 0.805462187404089 0.0 + + {[VA]|[{I|L}G]}HDS{M(Oxidation (M))|F}VAV;{[VA]|[{I|L}G]}HDYAVAV;[HD]{[VA]|[{I|L}G]}S{M(Oxidation (M))|F}VAV;[HD]{[VA]|[{I|L}G]}YAVAV;{[VA]|[{I|L}G]}HDY[Q{I|L}]V;[HD]{[VA]|[{I|L}G]}Y[Q{I|L}]V 7.6785;6.9559;5.4242;4.7016;4.1507;1.8965 +;-;-;-;-;- + 174 1 1.366 40622.4 1.0 6170 5374 11539 HBL1_DMSO_200M_050219_1,11546 HBL1_DMSO_200M_050219_1,11546,AVHDSFVAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11547 59.618 66.0 562810.0 25 0 102400.0 + 11031 GAYDGEEHLI 10 69 552.2543248928043 1102.4940968524086 2 552.2540161013603 MULTI CID FTMS 0 0 0 11539 590479.75 0.5889616644996482 1 -0.0953216552734375 8 Unmodified _GAYDGEEHLI_ ENSG00000214107|ENST00000397548|MAGEB1 20.453626601364224 0.5043500229302764 3 VEWD{[WS]|[C(Carbamidomethyl (C)){I|L}]} 6 8 24.442 0.0 0.0 2.217 0.0 0.0 282.1691761701188 0.0 282.1691761701188 0.0 5.189549981487076 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 VEWD{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.217 - 187 1 1.366 35426.4 1.0 6171 5374 11539 HBL1_DMSO_200M_050219_1,11547 HBL1_DMSO_200M_050219_1,11547,GAYDGEEHLI False True GAYDGEEHLI 59.61774 552.25401610136 17229072.0 11539.0 ENSG00000214107|ENST00000397548|MAGEB1 2.479321122169494 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11548 59.62 79.0 817760.0 25 0 142720.0 + 21212 LPDGRIIKV 9 84 337.5500828701165 1009.6284192105496 3 337.5498535037041 MULTI CID FTMS 0 0 0 11539 509265.125 0.5946724680298235 -2 0.1989936828613281 9 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 30.7034409873982 0.1405282614900322 3 {I|L}PD 3 6 31.884 0.0 0.0 3.158 0.0 0.0 0.0 681.4427939489126 681.4427939489126 14.819201376014316 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 + {I|L}PD 3.158 + + 68 + 1 1.366 58943.1 1.0 6172 5374 11539 HBL1_DMSO_200M_050219_1,11548 HBL1_DMSO_200M_050219_1,11548,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11549 59.621 63.0 638100.0 25 0 51622.0 + 44750 YPLESRPSL 9 50 531.284699392504 1060.5548458518078 2 531.2847167849541 MULTI CID FTMS 0 0 0 11539 422631.625 1.0 0 0.0 10 Unmodified _YPLESRPSL_ ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1 17.11289562659939 0.3734572693229295 3 YP{I|L}E 4 5 56.983 0.0 0.0 5.3729 0.0 0.0 0.0 555.2901705377561 555.2901705377561 31.57644705515452 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.0 + YP{I|L}E 5.3729 + + 19 + 1 1.366 42364.5 1.0 6173 5374 11539 HBL1_DMSO_200M_050219_1,11549 HBL1_DMSO_200M_050219_1,11549,YPLESRPSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11550 59.626 245.0 885050.0 25 0 97341.0 + 39529 VAVKILKV 8 173 435.312636518096 868.610720102992 2 435.3125488162041 MULTI CID FTMS 0 0 0 11539 450910.53125 1.0 0 0.0 11 Unmodified _VAVKILKV_ ENSG00000132155|ENST00000251849|RAF1;ENST00000460610.1_1_3:12632295-12641253:-|nuORF;ENST00000494557.1_1_3:12632295-12633310:-|nuORF;nc|ENSG00000132155|P04049-2|RAF1 74.42276476219924 0.1056688965812189 3 VAVK{I|L}{I|L}KV 8 0 + 86.034 0.0 0.0 9.9048 9.9048 91.142 0.0 0.0 0.0 33.399480616943514 5.496719218682756 5.496719218682756 5.496719218682756 0 1.830780892006716 1.6989700043360187 0.0 0.5055690986777881 + + VAVK{I|L}{I|L}KV;VAVK{I|L}{I|L}VK 9.9048;9.272 +;- + 780 + 1 1.366 168640.0 1.0 6174 5374 11539 HBL1_DMSO_200M_050219_1,11550 HBL1_DMSO_200M_050219_1,11550,VAVKILKV True True VAVKILKV 59.625649 435.312548816204 3377305.5 11539.0 nc|ENSG00000132155|P04049-2|RAF1;;ENST00000460610.1_1_3:12632295-12641253:-|nuORF;;ENSG00000132155|ENST00000251849|RAF1;;ENST00000494557.1_1_3:12632295-12633310:-|nuORF 4.784942785898845 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11551 59.628 97.0 639440.0 25 0 74580.0 + -1 KVTEGLVDV 9 101 479.7732165810685 957.5318802289372 2 480.2748290896416 MULTI CID FTMS 0 0 0 11539 438711.09375 0.3675224153578933 4 -0.4052734375 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LFRLPGDV_ ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR 14.581692164780916 0.6954967302934248 3 [KC]VKV[PA]DV 9 -1 + 49.543 0.0 0.0 5.174 5.174 87.457 0.0 0.0 0.0 40.80584053089659 14.973024840566469 14.973024840566469 17.02938981054003 0 0.0 0.0 1.066901560044258 0.0 [KC]VKV[PA]DV;[KC]VKV{I|L}D[PG];[KC]VKV{I|L}G[DP];[KC]VKV[DV][PA];[VP]{[CT]|[{M(Oxidation (M))|F}G]}VKV{[NV]|[RG]};{[TV]|[{I|L}S]}{[CP]|[EA]}VKV{[NV]|[RG]};{[QG]|[NA]}[WK]KV{[NV]|[RG]};[KC]VK[R{I|L}][DP];[TA]WR{I|L}V{[NV]|[RG]};[VP][R{M(Oxidation (M))|F}]KV{[NV]|[RG]} 5.174;3.3956;3.2338;3.1326;2.2187;2.1619;1.648;1.4117;1.2724;0.82554 -;-;-;-;-;-;-;-;-;- 375 + 1 1.366 50037.1 1.0 6175 5374 11539 HBL1_DMSO_200M_050219_1,11551 HBL1_DMSO_200M_050219_1,11551,LFRLPGDV False False KVTEGLVDV 59.627753 480.274829089642 9783000.0 11539.0 ENSG00000125944|ENST00000302271|HNRNPR;;nc|ENSG00000125944|O43390-3|HNRNPR 1.6869782706101737 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11552 59.63 135.0 564970.0 25 0 97690.0 -1 LGSLTPVP 8 97 413.2379010717148 824.4612492102297 2 413.2382690310478 MULTI CID FTMS 0 0 0 11539 428163.0625 0.6426480562328036 7 -0.6749801635742188 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LGSLTPVP_ ENST00000554756.1_1_14:24805383-24807435:-|nuORF 5.230669730166228 0.792582437072536 3 V 1 -1 8.6292 0.0 0.0 1.0466 0.0 0.0 707.3818710137438 0.0 707.3818710137438 0.0 0.0457168971993517 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0466 + + 22 + 1 1.366 63423.6 1.0 6176 5374 11539 HBL1_DMSO_200M_050219_1,11552 HBL1_DMSO_200M_050219_1,11552,LGSLTPVP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11553 59.644 767.0 221200.0 25 0 56140.0 -1 0 51 1169.481639113599 3505.423087940997 3 1170.150683581829 MULTI CID FTMS 0 0 0 11539 398979.625 1.0 0 0.0 14 3 Y{M(Oxidation (M))|F}GYWK 6 -1 33.621 0.0 0.0 0.9591 0.0 0.0 1634.578069485722 1023.4754618393008 2658.053531325023 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 Y{M(Oxidation (M))|F}GYWK 0.9591 - 89 + 1 1.366 143648.8 1.0 6177 5374 11539 HBL1_DMSO_200M_050219_1,11553 HBL1_DMSO_200M_050219_1,11553, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11554 59.648 196.0 788140.0 25 0 128330.0 + 41271 VPHGGFANI 9 163 456.2400613218112 910.4655697104224 2 456.2395507693291 MULTI CID FTMS 0 0 0 11539 324304.1875 0.335670580789033 -2 0.1989936828613281 15 Unmodified _VPHGGFANI_ ENSG00000085382|ENST00000262903|HACE1;nc|ENSG00000085382|Q8IYU2-2|HACE1;nc|ENSG00000085382|Q8IYU2-3|HACE1;nc|ENSG00000085382|Q8IYU2-4|HACE1 32.116972079565 0.1225432171549407 3 [VP]SDG{I|L}PN{I|L} 9 4 [VP]SDG + + 34.686 6.2765 1.3788 3.8097 3.8097 52.059 0.0 0.0 0.0 0.0 13.116202354569488 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.5 [VP]SDG{I|L}PN{I|L} 3.8097 - 1868 + 1 1.366 121662.7 1.0 6178 5374 11539 HBL1_DMSO_200M_050219_1,11554 HBL1_DMSO_200M_050219_1,11554,VPHGGFANI True True VPHGGFANI 59.647542 456.239550769329 7610458.0 11539.0 ENSG00000085382|ENST00000262903|HACE1;;nc|ENSG00000085382|Q8IYU2-4|HACE1;;nc|ENSG00000085382|Q8IYU2-3|HACE1;;nc|ENSG00000085382|Q8IYU2-2|HACE1 5.014124711354573 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11555 59.653 282.0 433020.0 25 0 35686.0 + + 18554 KFYPAGDVLRV 11 171 421.7516447479731 841.4887365627462 2 421.7514831423759 MULTI CID FTMS 0 0 0 11539 304214.3125 0.6421848297568581 -6 0.6093597412109375 16 Unmodified _LAAAVVVEA_ nc|ENSG00000275395|Q9Y6R7|FCGBP;ENSG00000275395|ENST00000616721|FCGBP 18.13498045792455 0.3457906370836843 3 {I|L}AAEA 5 -1 42.752 0.0 0.0 5.0805 0.0 0.0 0.0 383.2421358697876 383.2421358697876 28.28447971350174 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {I|L}AAEA 5.0805 - 209 + 1 1.366 96653.5 1.0 6179 5374 11539 HBL1_DMSO_200M_050219_1,11555 HBL1_DMSO_200M_050219_1,11555,LAAAVVVEA False False KFYPAGDVLRV 59.652718 421.751483142376 387849.1875 11539.0 nc|ENSG00000275395|Q9Y6R7|FCGBP;;ENSG00000275395|ENST00000616721|FCGBP 2.338276505470276 3.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11556 59.657 235.0 616940.0 25 0 41671.0 + 37989 TNLSGGLMSC 10 168 491.7199711670006 981.4253894008012 2 491.7200500369072 MULTI CID FTMS 0 0 0 11539 276853.90625 0.6906672595735451 -1 0.1237220764160156 17 Unmodified _TNLSGGLMSC_ REV__ENSG00000145491|ENST00000274134|ROPN1L;REV__ENST00000510520.5_1_5:10442060-10472024:+|nuORF;REV__ENST00000515762.5_1_5:10442078-10461472:+|nuORF 22.65808497894818 0.4596126414678359 3 {[QS]|[NT]}{I|L}GSG{I|L}[CS]M 10 -1 + 33.462 0.0 0.0 3.4095 3.4095 75.724 0.0 0.0 0.0 5.36850382625725 5.228787452803374 5.228787452803374 5.228787452803374 0 1.1549471895720984 0.638272163982407 0.0 0.0 {[QS]|[NT]}{I|L}GSG{I|L}[CS]M;{[QS]|[NT]}{I|L}GSG{[MG]|[TS]}{M(Oxidation (M))|F}V;{[QS]|[NT]}{I|L}GS[MN]{M(Oxidation (M))|F}V;{[QS]|[NT]}{I|L}GSG[MT]AM;VQTGSG{I|L}[CS]M;{[QS]|[NT]}{I|L}GSG[MT]CV;VQTGSG{[MG]|[TS]}{M(Oxidation (M))|F}V;VQTGS[MN]{M(Oxidation (M))|F}V;VQTGSG[MT]AM;{[QS]|[NT]}{I|L}[NS]{I|L}[CS]M 3.4095;2.8767;2.8722;2.796;2.7266;2.57;2.1938;2.1893;2.1132;2.1124 -;-;-;-;-;-;-;-;-;- 1158 + 1 1.366 113219.8 1.0 6180 5374 11539 HBL1_DMSO_200M_050219_1,11556 HBL1_DMSO_200M_050219_1,11556,TNLSGGLMSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11557 59.67 685.0 229060.0 25 0 21152.0 + 2645 ATAYFSSFSAY 11 166 607.7700061225156 1213.5254593118311 2 607.7700683474541 MULTI CID FTMS 0 0 0 11539 274249.1875 0.7498781529837993 -1 0.1237220764160156 18 Unmodified _ATAYFSSFSAY_ ENST00000525264.5_1_11:64981802-64993164:+|nuORF;nc|ENSG00000197847|A6NK97-2|SLC22A20P;nc|ENSG00000197847|A6NK97|SLC22A20P 29.081581746732265 0.4093582134107448 3 [H{I|L}]Q{M(Oxidation (M))|F}[HS][DP]AY 10 7 + 48.37 0.0 0.0 3.9859 3.9859 76.166 0.0 0.0 0.0 4.427189138061138 12.658715643802765 4.427189138061138 4.427189138061138 0 1.2302046884880935 0.7958800173440752 0.9247425010840048 0.4247425010840047 [H{I|L}]Q{M(Oxidation (M))|F}[HS][DP]AY;[HQ]{I|L}{M(Oxidation (M))|F}[HS][DP]AY;[TA][HM][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}TAY;[HQ]{M(Oxidation (M))|F}{I|L}[HS][DP]AY;[TA][HM]{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]TAY;[H{I|L}][CS][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}TAY;[H{I|L}][CS]{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]TAY;[HQ]{M(Oxidation (M))|F}[EC]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}AY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QH[HS][DP]AY;[H{I|L}]CS[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]T{I|L}AY 3.9859;3.6211;3.0866;3.023;2.9966;2.9358;2.8459;2.8322;2.7881;2.764 -;-;-;-;-;-;-;-;-;- 1022 1 1.366 115608.9 1.0 6181 5374 11539 HBL1_DMSO_200M_050219_1,11557 HBL1_DMSO_200M_050219_1,11557,ATAYFSSFSAY False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 11558 59.683 716.0 231480.0 25 0 11938.0 + 30152 QVPEEQVLNAA 11 167 599.3093543390412 1196.6041557448823 2 599.3100463747978 MULTI CID FTMS 0 0 0 11539 193225.890625 0.2484354129564786 -2 0.1989936828613281 19 Unmodified _QVPEEQVLNAA_ ENSG00000160813|ENST00000292330|PPP1R35 89.40071534611396 0.0006776708238028 3 [EP]EQVQVAN[{I|L}A] 11 6 + 84.518 0.0 0.0 7.0631 7.0631 88.814 0.0 0.0 0.0 8.694028404633158 7.367585652254178 7.367585652254178 7.257724967479859 0 0.0 0.7958800173440752 1.4674165578762484 1.3882104921644451 [EP]EQVQVAN[{I|L}A];[EP]EQV{I|L}NAN[{I|L}A];[EP]EQVQV{I|L}QQ;{[QV]|[N{I|L}]|[RA]|[KV]}E[EP]QVAN[PS];[EP]EQV[AG]VAN[{I|L}A];[EP]EQVQVAGG[{I|L}A];{[QV]|[N{I|L}]|[RA]|[KV]}PEEQVAN[PS];[EP]E[AG]VQVAN[{I|L}A];[EP]EQVQ{I|L}GN[{I|L}A];[EP]EQV{I|L}N{I|L}QQ 7.0631;6.4566;6.375;6.3366;6.3002;6.3002;6.2806;6.059;5.8869;5.7684 -;-;-;-;-;-;-;-;-;- 10396 1 1.366 123855.7 1.0 6182 5374 11539 HBL1_DMSO_200M_050219_1,11558 HBL1_DMSO_200M_050219_1,11558,QVPEEQVLNAA True True QVPEEQVLNAA 59.682647 599.310046374798 4693097.0 11539.0 ENSG00000160813|ENST00000292330|PPP1R35 5.004531065622966 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11559 59.696 800.0 178100.0 25 0 10897.0 -1 0 110 881.9123505721144 1761.8101482110287 2 881.9117919802666 MULTI CID FTMS 0 0 0 11539 180565.5625 0.7286831325074812 1 -0.0953216552734375 20 3 [VP]QN{[CA]|SS}[H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 65.121 0.0 0.0 3.6962 3.6962 51.721 0.0 0.0 0.0 3.243719559664413 40.41456645087969 3.243719559664413 0.0 0 1.305462187404089 0.8239087409443188 0.0 1.6237125054200234 [VP]QN{[CA]|SS}[H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]QN[HC][{I|L}A]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]QN[HC][RV]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HC][{I|L}A]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{[CA]|SS}[H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HC][RV]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[QP]VN[HC][{I|L}A]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[QP]VN{[CA]|SS}[H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[QP]VN[HC][RV]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]Q[C(Carbamidomethyl (C))Q][H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.6962;3.6962;3.5862;3.4824;3.4824;3.3724;3.288;3.288;3.178;3.0743 -;-;-;-;-;-;-;-;-;- 903 1 1.366 98505.9 0.9200000166893004 6183 5374 11539 HBL1_DMSO_200M_050219_1,11559 HBL1_DMSO_200M_050219_1,11559, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11561 59.701 8.9 3908100.0 25 0 269070.0 + 22109 LPPPVQTQI 9 71 496.7924844808842 991.5704160285684 2 496.7925292849541 MULTI CID FTMS 0 0 0 11560 4799309.0 0.6653958087615576 -3 0.2943153381347656 1 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 34.10243960390752 0.1078313939113124 3 [{I|L}P]PPVQ[QT]{I|L} 9 0 + 53.082 0.0 0.0 5.3533 5.3533 78.581 0.0 0.0 0.0 24.13734275855269 37.31166437259308 24.13734275855269 3.0102999566398125 0 0.5 1.6989700043360187 0.0 0.0 + + [{I|L}P]PPVQ[QT]{I|L};[{I|L}P]PNP{I|L}[QT]{I|L};[{I|L}P]PPN{I|L}[QT]{I|L};[{I|L}P]PPV[AG][QT]{I|L};[{I|L}P]PGGP{I|L}[QT]{I|L};[{I|L}P]PPGG{I|L}[QT]{I|L};[{I|L}P]PN[QT][{I|L}P]{I|L};[VP]PP{I|L}Q[QT]{I|L};[VP]PPQ{I|L}[QT]{I|L};[VP]PQP{I|L}[QT]{I|L} 5.3533;5.0498;4.8722;4.4247;4.1211;3.9435;3.4623;2.3509;1.8697;1.5661 +;-;-;-;-;-;-;-;-;- + 306 1 1.366 31486.4 1.0 6184 5375 11560 HBL1_DMSO_200M_050219_1,11561 HBL1_DMSO_200M_050219_1,11561,LPPPVQTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11562 59.702 17.0 2904800.0 25 0 550730.0 + 21305 LPEPSIRSV 9 49 499.2873259038439 996.5600988744876 2 499.2871887087822 MULTI CID FTMS 0 0 0 11560 2733779.5 0.8198346103672159 -1 0.0953216552734375 2 Unmodified _LPEPSIRSV_ ENSG00000100077|ENST00000324198|GRK3;ENSG00000173020|ENST00000308595|GRK2 29.84058131909904 0.1515068451768857 3 {I|L}PEP 4 5 59.909 0.0 0.0 6.0116 0.0 0.0 0.0 557.3050672119323 557.3050672119323 54.42471268044436 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.4247425010840047 0.0 + {I|L}PEP 6.0116 + + 62 + 1 1.366 42318.7 1.0 6185 5375 11560 HBL1_DMSO_200M_050219_1,11562 HBL1_DMSO_200M_050219_1,11562,LPEPSIRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11563 59.703 18.0 3683200.0 25 0 703120.0 + 44636 YPFKPPKV 8 71 325.86048683472575 974.5596311043772 3 325.8600646853447 MULTI CID FTMS 0 0 0 11560 2452666.75 0.0317981155688858 8 -0.7946586608886719 3 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 53.709 0.0 0.0 5.5111 5.5111 89.98 0.0 0.0 0.0 16.084818232910116 5.41502966049709 5.41502966049709 36.87663069338636 0 0.25 1.154901959985743 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;Y[{I|L}T]KPP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]K[HS]KV 5.5111;1.7272;1.476;0.65864 +;-;-;- + 221 + 1 1.366 59994.3 1.0 6186 5375 11560 HBL1_DMSO_200M_050219_1,11563 HBL1_DMSO_200M_050219_1,11563,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11564 59.704 24.0 2366200.0 25 0 204020.0 + 21061 LPAERIQEI 9 77 534.8068297460504 1067.5991065589008 2 534.8060790896416 MULTI CID FTMS 0 0 0 11560 1713049.625 0.6209246543533469 1 -0.1137809753417968 4 Unmodified _LPAERIQEI_ ENSG00000136448|ENST00000258960|NMT1;ENST00000590114.5_1_17:43138721-43173651:+|nuORF;nc|ENSG00000136448|P30419-2|NMT1 26.268140514670165 0.1969607489560049 3 {I|L}PYQRE{I|L} 7 4 56.062 0.0 0.0 5.2513 0.0 0.0 0.0 165.0670565240844 165.0670565240844 40.12025114445692 0.0 0.0 0.0 0 1.1237125054200234 2.0 0.0 0.0 {I|L}PYQRE{I|L} 5.2513 - 182 + 1 1.366 52815.7 1.0 6187 5375 11560 HBL1_DMSO_200M_050219_1,11564 HBL1_DMSO_200M_050219_1,11564,LPAERIQEI False True LPAERIQEI 59.704386 534.806079089642 41563344.0 11560.0 ENSG00000136448|ENST00000258960|NMT1;;nc|ENSG00000136448|P30419-2|NMT1;;ENST00000590114.5_1_17:43138721-43173651:+|nuORF 3.950334310531616 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11565 59.706 36.0 1467200.0 25 0 137790.0 + 44650 YPFKPPKV 8 64 488.2869567505858 974.5593605679716 2 488.2866393923759 MULTI CID FTMS 0 0 0 11560 1062774.375 0.0313185699610306 10 -1.0065422058105469 5 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 65.131 0.0 0.0 6.6831 6.6831 94.375 0.0 0.0 0.0 40.23632243455616 6.682437647924218 6.682437647924218 65.13087233249003 0 0.3807196863200844 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV 6.6831 + + 109 + 1 1.366 46356.8 1.0 6188 5375 11560 HBL1_DMSO_200M_050219_1,11565 HBL1_DMSO_200M_050219_1,11565,YPFKPPKV False True YPFKPPKV 59.705565 488.286639392376 23092886912.0 11560.0 nc|ENSG00000109332|P61077-3|UBE2D3;;ENSG00000182247|ENST00000396703|UBE2E2;;nc|ENSG00000170142|P51965-3|UBE2E1;;ENSG00000078967|ENST00000222402|UBE2D4;;nc|ENSG00000170142|P51965-2|UBE2E1;;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;;nc|ENSG00000131508|P62837-2|UBE2D2;;ENSG00000170142|ENST00000306627|UBE2E1;;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;;ENSG00000170035|ENST00000410062|UBE2E3;;ENSG00000131508|ENST00000398733|UBE2D2;;nc|ENSG00000109332|P61077-2|UBE2D3;;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;;ENSG00000109332|ENST00000453744|UBE2D3;;ENST00000493707.1_1_3:23907959-23932094:+|nuORF 8.24893887837728 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11566 59.707 66.0 441100.0 25 0 36165.0 + 29172 QFYDNKGITY 10 68 624.7984785328847 1247.5824041325693 2 624.7985717654228 MULTI CID FTMS 0 0 0 11560 809877.75 0.3643180499834345 2 -0.1801834106445312 6 Unmodified _QFYDNKGITY_ ENSG00000152455|ENST00000354919|SUV39H2;nc|ENSG00000152455|Q9H5I1-2|SUV39H2;nc|ENSG00000152455|Q9H5I1-3|SUV39H2 12.240655878213236 0.6421556946785427 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R 3 8 28.116 0.0 0.0 2.2537 0.0 0.0 0.0 813.3242891900999 813.3242891900999 10.157490375968765 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R 2.2537 - 32 + 1 1.366 32108.3 1.0 6189 5375 11560 HBL1_DMSO_200M_050219_1,11566 HBL1_DMSO_200M_050219_1,11566,QFYDNKGITY False True QFYDNKGITY 59.707167 624.798571765423 39605152.0 11560.0 ENSG00000152455|ENST00000354919|SUV39H2;;nc|ENSG00000152455|Q9H5I1-2|SUV39H2;;nc|ENSG00000152455|Q9H5I1-3|SUV39H2 6.80862029393514 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11567 59.708 39.0 973060.0 25 0 104660.0 + 8231 EPYPEVSRI 9 60 545.2821384926146 1088.5497240520292 2 545.2816650271416 MULTI CID FTMS 0 0 0 11560 655539.5 0.2083347634629221 4 -0.3581733703613281 7 Unmodified _EPYPEVSRI_ ENSG00000165643|ENST00000425225|SOHLH1;nc|ENSG00000165643|Q5JUK2|SOHLH1 15.738622578938676 0.4106572216562794 3 PEV 3 6 16.198 0.0 0.0 1.488 0.0 0.0 389.1579891375712 371.2054842584594 760.3634733960306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + PEV 1.488 + + 24 + 1 1.366 34304.6 1.0 6190 5375 11560 HBL1_DMSO_200M_050219_1,11567 HBL1_DMSO_200M_050219_1,11567,EPYPEVSRI False True EPYPEVSRI 59.708346 545.281665027142 295162940.0 11560.0 ENSG00000165643|ENST00000425225|SOHLH1;;nc|ENSG00000165643|Q5JUK2|SOHLH1 7.335161209106445 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11568 59.71 90.0 796520.0 25 0 131150.0 + -1 TVMEICTARMC 11 78 657.7898486022981 1313.565144271396 2 657.7910644412041 MULTI CID FTMS 0 0 0 11560 521575.53125 0.2691256482557288 -1 0.0953216552734375 8 Carbamidomethyl (C) _TVMEIC(Carbamidomethyl (C))TARMC_ REV__ENST00000496688.1_1_9:123589031-123593637:-|nuORF 18.373094154950223 0.6529654022026722 3 {[TV]|[{I|L}S]}MEESG{I|L} 8 -1 69.914 0.0 0.0 5.3225 0.0 0.0 0.0 464.1636913362106 464.1636913362106 58.67722213736919 0.0 0.0 0.0 0 0.805462187404089 2.0 0.8494850021680094 0.0 {[TV]|[{I|L}S]}MEESG{I|L} 5.3225 - 217 + 1 1.366 58264.7 1.0 6191 5375 11560 HBL1_DMSO_200M_050219_1,11568 HBL1_DMSO_200M_050219_1,11568,TVMEICTARMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11569 59.712 94.0 915800.0 25 0 180830.0 + 21480 LPHPGLQV 8 98 430.75303118211576 859.4915094310315 2 430.7526733279228 MULTI CID FTMS 0 0 0 11560 511286.46875 0.1107618667865373 4 -0.3581733703613281 9 Unmodified _LPHPGLQV_ ENSG00000184743|ENST00000398868|ATL3 38.99230528602208 0.2511498934509823 3 [{I|L}P]HGP{I|L}QV 8 2 + 27.445 0.0 0.0 3.1931 3.1931 76.749 0.0 0.0 0.0 7.033348097384689 7.474250108400465 7.033348097384689 6.817496819840656 0 0.5796896906561032 1.0457574905606752 0.0 0.0 [{I|L}P]HGP{I|L}QV;[{I|L}P]GHP{I|L}QV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP{I|L}QV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}P{I|L}QV 3.1931;2.3999;2.3748;1.5221 -;-;-;- 106 1 1.366 72957.2 1.0 6192 5375 11560 HBL1_DMSO_200M_050219_1,11569 HBL1_DMSO_200M_050219_1,11569,LPHPGLQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11570 59.716 164.0 426140.0 25 0 52017.0 -1 0 112 318.1964633889232 634.3783738446464 2 318.1967651247978 MULTI CID FTMS 0 0 0 11560 364159.0625 0.0225477976337382 8 -0.7946586608886719 10 3 {I|L} 1 -1 8.8735 0.0 0.0 1.3988 0.0 0.0 503.2835842712073 0.0 503.2835842712073 0.0 -8.377093510311191 -8.377093510311191 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3988 - 19 + 1 1.366 60676.4 1.0 6193 5375 11560 HBL1_DMSO_200M_050219_1,11570 HBL1_DMSO_200M_050219_1,11570, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11571 59.718 115.0 497210.0 25 0 83814.0 + 9387 FISEFEHRV 9 95 388.5330285054788 1162.5772561166364 3 388.5327331423759 MULTI CID FTMS 0 0 0 11560 316832.8125 0.8919968256872985 -1 0.0953216552734375 11 Unmodified _FISEFEHRV_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF 26.268140514670165 0.1969607489560049 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EHRV 9 0 + 40.441 0.0 0.0 3.4786 3.4786 67.969 0.0 0.0 0.0 4.22508200162774 0.0877392430750489 0.0877392430750489 0.0877392430750489 0 0.25 0.0 0.5 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EHRV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EV[RH];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EV{[HG]|PP}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}[YK]MV;[{M(Oxidation (M))|F}T][YK]{M(Oxidation (M))|F}ES{[QN]|[E{I|L}]|[KN]} 3.4786;3.471;2.8956;2.2503;2.0338 +;-;-;-;- + 96 + 1 1.366 51731.6 1.0 6194 5375 11560 HBL1_DMSO_200M_050219_1,11571 HBL1_DMSO_200M_050219_1,11571,FISEFEHRV False True FISEFEHRV 59.718019 388.532733142376 2952288.75 11560.0 ENST00000527047.5_1_11:237024-247462:+|nuORF;;ENSG00000185627|ENST00000532097|PSMD13 7.633076349894206 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11572 59.72 91.0 294260.0 25 0 23929.0 + -1 LLLVLCCEL 9 68 538.298036773451 0 538.2997314333916 PEAK CID FTMS 0 0 0 11560 303276.28125 0.0440487626202566 7 -0.6878662109375 12 Carbamidomethyl (C) _LLLVLC(Carbamidomethyl (C))CEL_ REV__ENSG00000082516|ENST00000285873|GEMIN5 13.50788311687929 0.2720325786695375 3 P 1 -1 9.877 0.0 0.0 0.91914 0.0 0.0 226.163992392802 748.3480318658811 974.5120242586833 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 P 0.91914 - 10 + 1 1.366 25965.7 1.0 6195 5375 11560 HBL1_DMSO_200M_050219_1,11572 HBL1_DMSO_200M_050219_1,11572,LLLVLCCEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11573 59.732 694.0 367700.0 25 0 23711.0 + 21215 LPDGRIIKV 9 197 505.8219969682756 1009.6294410033512 2 505.8215820193291 MULTI CID FTMS 0 0 0 11560 226680.359375 0.6856162739844474 -1 0.0953216552734375 13 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 49.74193281347159 0.0409357517904489 3 {I|L}PDV 4 5 44.954 0.0 0.0 4.4525 0.0 0.0 0.0 582.3718966119749 582.3718966119749 7.7962253513872 0.0 0.0 0.0 0 0.5796896906561032 1.6989700043360187 0.0 0.0 {I|L}PDV 4.4525 - 1917 + 1 1.366 193205.8 1.0 6196 5375 11560 HBL1_DMSO_200M_050219_1,11573 HBL1_DMSO_200M_050219_1,11573,LPDGRIIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11574 59.746 775.0 216640.0 25 0 32566.0 -1 0 107 865.9009262064662 0 865.8999511599541 PEAK CID FTMS 0 0 0 11560 203296.0625 0.9128689711011372 3 -0.3099517822265625 14 3 PN{I|L}NAD[YT]PTP 11 -1 66.024 0.0 0.0 3.8169 0.0 0.0 261.0820441491749 282.14573084049067 543.2277749896656 0.0 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.9802046884880936 1.2302046884880935 PN{I|L}NAD[YT]PTP 3.8169 - 1086 + 1 1.366 116461.0 1.0 6197 5375 11560 HBL1_DMSO_200M_050219_1,11574 HBL1_DMSO_200M_050219_1,11574, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11575 59.749 202.0 452640.0 25 0 41785.0 + 45640 YVPETVYRV 9 74 563.3004221509449 1124.5862913686897 2 563.3002197146416 MULTI CID FTMS 0 0 0 11560 192759.96875 0.0933064410485964 -3 0.2943153381347656 15 Unmodified _YVPETVYRV_ ENSG00000082701|ENST00000264235|GSK3B;ENSG00000105723|ENST00000222330|GSK3A;nc|ENSG00000082701|P49841-2|GSK3B 34.40172386719151 0.1061884637610825 3 [YV]PETVY[RV] 9 0 + 64.983 0.0 0.0 5.7784 5.7784 82.462 0.0 0.0 0.0 32.53083433768431 2.922152515121219 2.922152515121219 4.771212547196626 0 0.3807196863200844 2.0 0.7742275032520141 0.0 + + [YV]PETVY[RV];[YV]PEVTY[RV];[YV]PVETY[RV];[YV]VPETY[RV];[EP]T[{I|L}P]VEP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[EP]T[{I|L}P]EVP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[EP]T[{I|L}P]EPV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[TP]E[{I|L}P]VEP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[TV]|[{I|L}S]}[HV]VTEP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]PV[SG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.7784;5.3541;5.0864;4.8465;4.5948;4.3271;4.0872;3.2407;3.0434;3.0132 +;-;-;-;-;-;-;-;-;- + 271 + 1 1.366 76466.3 1.0 6198 5375 11560 HBL1_DMSO_200M_050219_1,11575 HBL1_DMSO_200M_050219_1,11575,YVPETVYRV True True YVPETVYRV 59.749425 563.300219714642 50518350.0 11560.0 nc|ENSG00000082701|P49841-2|GSK3B;;ENSG00000082701|ENST00000264235|GSK3B;;ENSG00000105723|ENST00000222330|GSK3A 6.725692272186279 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11576 59.762 732.0 281250.0 25 0 31935.0 + 44725 YPIEIDPHRTV 11 139 670.3535309652957 0 670.3548461794853 PEAK CID FTMS 0 0 0 11560 180368.625 0.3117658497378092 -1 0.0953216552734375 16 Unmodified _YPIEIDPHRTV_ ENSG00000141698|ENST00000435506|NT5C3B;ENST00000393910.5_1_17:39983688-39992209:-|nuORF;ENST00000469698.5_1_17:39981777-39991902:-|nuORF;nc|ENSG00000141698|Q969T7-2|NT5C3B 78.61045856554632 1.2304420431447944e-05 3 P{I|L}E{I|L}D[VG]{I|L}E 9 6 62.203 0.0 0.0 4.6465 0.0 0.0 163.06342680506037 207.114068853186 370.1774956582464 0.0 0.0 0.0 0.0 0 2.5114393726401687 0.0 0.8494850021680094 0.0 P{I|L}E{I|L}D[VG]{I|L}E 4.6465 - 1518 + 1 1.366 150923.3 1.0 6199 5375 11560 HBL1_DMSO_200M_050219_1,11576 HBL1_DMSO_200M_050219_1,11576,YPIEIDPHRTV True True YPIEIDPHRTV 59.762127 670.354846179485 47868718.0 11560.0 ENST00000469698.5_1_17:39981777-39991902:-|nuORF;;ENST00000393910.5_1_17:39983688-39992209:-|nuORF;;ENSG00000141698|ENST00000435506|NT5C3B;;nc|ENSG00000141698|Q969T7-2|NT5C3B 7.802438418070476 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11577 59.768 315.0 461560.0 25 0 66005.0 + 13548 HPFHVIRI 8 167 340.20306148461736 1017.587355054052 3 340.2013122439384 MULTI CID FTMS 0 0 0 11560 156171.015625 0.0378290673870541 4 -0.3581733703613281 17 Unmodified _HPFHVIRI_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000482732.1_1_X:153628091-153628283:+|nuORF;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 16.942295170755138 0.6606234159769251 3 [H{I|L}]MHV{I|L}[R{I|L}] 8 2 + 28.901 0.0 0.0 2.8401 2.8401 66.685 0.0 0.0 0.0 20.31743128760553 3.4948500216800937 3.4948500216800937 0.1230450566754548 0 0.3494850021680094 0.0 0.0 0.0 [H{I|L}]MHV{I|L}[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}HV{I|L}[R{I|L}];[H{I|L}]M{I|L}[HV][R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}[HV][R{I|L}] 2.8401;2.8281;0.85899;0.8469 -;+;-;- + 78 + 1 1.366 120116.2 1.0 6200 5375 11560 HBL1_DMSO_200M_050219_1,11577 HBL1_DMSO_200M_050219_1,11577,HPFHVIRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11578 59.783 786.0 236910.0 25 0 12163.0 + -1 TVVPGGDLAKV 11 194 528.3078309775317 527.3005545109316 1 528.3091308474541 MULTI CID FTMS 0 0 0 11560 143681.71875 1.0 0 0.0 18 ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000167553|ENST00000301072|TUBA1C;nc|ENSG00000183785|Q9NY65-2|TUBA8;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A 3 {[TV]|[{I|L}S]}V 3 -1 25.608 0.0 0.0 4.8564 0.0 0.0 0.0 225.09340664399727 225.09340664399727 8.574493100396378 0.0 0.0 0.0 0 0.25 1.5228787452803376 0.0916328861051033 0.0 {[TV]|[{I|L}S]}V 4.8564 - 251 1 1.366 146831.1 1.0 6201 5375 11560 HBL1_DMSO_200M_050219_1,11578 HBL1_DMSO_200M_050219_1,11578, False False TVVPGGDLAKV 59.782636 528.309130847454 1658199.25 11560.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000127824|ENST00000248437|TUBA4A;;ENSG00000152086|ENST00000312988|TUBA3E;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000167553|ENST00000301072|TUBA1C;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;ENSG00000167552|ENST00000301071|TUBA1A;;ENSG00000075886|ENST00000321253|TUBA3D;;ENSG00000198033|ENST00000400113|TUBA3C;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000198033|P0DPH7-2|TUBA3C;;nc|ENSG00000123416|P68363-2|TUBA1B;;nc|ENSG00000127824|P68366-2|TUBA4A 3.8396150271097818 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11579 59.796 800.0 200340.0 25 0 18850.0 -1 CQNTCCQPTCV 11 132 685.750320660136 1369.486088387072 2 685.7515746951103 MULTI CID FTMS 0 0 0 11560 139922.21875 0.0052288895434032 12 -1.1188316345214844 19 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))QNTC(Carbamidomethyl (C))C(Carbamidomethyl (C))QPTCV_ ENSG00000241595|ENST00000334109|KRTAP9-4 3.2813086475875832 0.8596665074481906 3 YMDAS 5 -1 34.425 0.0 0.0 2.5137 0.0 0.0 320.15857249565266 479.1070582312967 799.2656307269493 0.0 0.0 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 YMDAS 2.5137 - 291 + 1 1.366 119580.5 0.8299999833106995 6202 5375 11560 HBL1_DMSO_200M_050219_1,11579 HBL1_DMSO_200M_050219_1,11579,CQNTCCQPTCV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11580 59.81 800.0 163390.0 25 0 12155.0 + 2948 AVHETLVAV 9 148 469.76897581201536 937.5233986908308 2 469.7666198611259 MULTI CID FTMS 0 0 0 11560 136337.859375 0.1210181961756708 3 -0.3099517822265625 20 Unmodified _AVHETLVAV_ ENSG00000141873|ENST00000269740|SLC39A3 46.92087301778293 0.0471210510596396 3 {I|L}SDKV 5 8 29.164 0.0 0.0 3.1107 0.0 0.0 0.0 392.1927889459594 392.1927889459594 2.3366522059760086 0.0 0.0 0.0 0 0.242992819099939 2.0 0.0 0.0 {I|L}SDKV 3.1107 - 860 + 1 1.366 105116.9 0.7400000095367432 6203 5375 11560 HBL1_DMSO_200M_050219_1,11580 HBL1_DMSO_200M_050219_1,11580,AVHETLVAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11582 59.815 6.1 8701700.0 25 0 762710.0 + 38195 TPRHIIVRF 9 78 380.2327568163181 1137.6764410491542 3 380.2326537966728 MULTI CID FTMS 0 0 0 11581 7706140.0 0.6080124901454217 2 -0.1961708068847656 1 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 28.23362336080872 0.1719529537093671 3 TPRH{I|L}{I|L}V[R{M(Oxidation (M))|F}] 9 0 + 47.585 0.0 0.0 4.1827 4.1827 71.707 0.0 0.0 0.0 16.478174818886373 1.2371250542002343 1.2371250542002343 1.2371250542002343 0 1.048455006504028 0.0 0.0 0.4247425010840047 + + TPRH{I|L}{I|L}V[R{M(Oxidation (M))|F}];TPRH{I|L}{I|L}{M(Oxidation (M))|F}[RV];TPRH{I|L}{M(Oxidation (M))|F}{I|L}[RV] 4.1827;4.0739;3.8093 +;-;- + 67 + 1 1.367 51532.2 1.0 6204 5376 11581 HBL1_DMSO_200M_050219_1,11582 HBL1_DMSO_200M_050219_1,11582,TPRHIIVRF False True TPRHIIVRF 59.814631 380.232653796673 228031712.0 11581.0 nc|ENSG1000|Q9UN81|L1_ORF1 4.436293443044026 3.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11583 59.816 7.2 9399100.0 25 0 1907300.0 + 4458 DAYALNHTL 9 93 509.25362910442976 1016.4927052756595 2 509.2538329958916 MULTI CID FTMS 0 0 0 11581 7474969.5 0.0227546743375467 9 -0.89276123046875 2 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 85.64151623876279 0.0161498729896241 3 {[DA]|[EG]}YA{I|L}NH[{I|L}T] 9 0 + 81.559 0.0 0.0 8.0236 8.0236 95.675 0.0 0.0 0.0 35.58092317009783 16.733715863610243 16.733715863610243 16.70818753952375 0 1.25 1.6989700043360187 1.610924374808178 0.75 + + {[DA]|[EG]}YA{I|L}NH[{I|L}T];{[DA]|[EG]}YA{I|L}GGH[{I|L}T];{[DA]|[EG]}[TP]{I|L}VAD{[ES]|[DT]|[{I|L}C]};{[DA]|[EG]}[TP]A{I|L}VD{[ES]|[DT]|[{I|L}C]};{[DA]|[EG]}[TP]{I|L}AVD{[ES]|[DT]|[{I|L}C]};{[DA]|[EG]}[TP]A{I|L}{I|L}[WM];{[DA]|[EG]}[TP]{I|L}A{I|L}[WM];{[DA]|[EG]}[TP]{I|L}{[RE]|[WV]}{[ES]|[DT]|[{I|L}C]} 8.0236;6.3799;4.0125;3.616;3.5207;1.8052;1.7099;1.686 +;-;-;-;-;-;-;- + 373 + 1 1.367 55077.8 1.0 6205 5376 11581 HBL1_DMSO_200M_050219_1,11583 HBL1_DMSO_200M_050219_1,11583,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11584 59.817 16.0 3156000.0 25 0 458670.0 + -1 EPSLICSC 8 73 483.2065771547889 964.398601376378 2 483.2070190310478 MULTI CID FTMS 0 0 0 11581 3063661.25 0.6982055227919003 -2 0.2091026306152343 3 2 Carbamidomethyl (C) _EPSLIC(Carbamidomethyl (C))SC(Carbamidomethyl (C))_ REV__ENST00000367409.8_1_1:197061115-197062200:-|nuORF 19.438996006549623 0.6237395211498085 3 [EP]S{I|L} 4 -1 31.387 0.0 0.0 3.2546 0.0 0.0 0.0 535.1639266539747 535.1639266539747 2.2454626555970982 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.9247425010840048 0.0 [EP]S{I|L} 3.2546 + + 73 1 1.367 45745.6 1.0 6206 5376 11581 HBL1_DMSO_200M_050219_1,11584 HBL1_DMSO_200M_050219_1,11584,EPSLICSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11585 59.818 28.0 1913000.0 25 0 250740.0 + 44724 YPIEIDPHRTV 11 67 447.23793161296817 1338.6919654391045 3 447.2380554080009 MULTI CID FTMS 0 0 0 11581 1695413.25 1.0 0 0.0 4 Unmodified _YPIEIDPHRTV_ ENSG00000141698|ENST00000435506|NT5C3B;ENST00000393910.5_1_17:39983688-39992209:-|nuORF;ENST00000469698.5_1_17:39981777-39991902:-|nuORF;nc|ENSG00000141698|Q969T7-2|NT5C3B 22.774965066869 0.5574395181959457 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}E{I|L}DPH 8 3 45.411 0.0 0.0 3.3922 0.0 0.0 0.0 371.2041720026001 371.2041720026001 20.974184576165342 0.0 0.0 0.0 0 1.0172203223519531 1.2218487496163564 0.0 0.0 + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}E{I|L}DPH 3.3922 + + 210 + 1 1.367 47716.0 1.0 6207 5376 11581 HBL1_DMSO_200M_050219_1,11585 HBL1_DMSO_200M_050219_1,11585,YPIEIDPHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11586 59.819 32.0 1746900.0 25 0 330490.0 + -1 TVMEICTARMC 11 70 438.8622178895917 1313.564824268975 3 438.8626586794853 MULTI CID FTMS 0 0 0 11581 1352997.5 0.9332030893010792 -1 0.1137809753417968 5 Carbamidomethyl (C) _TVMEIC(Carbamidomethyl (C))TARMC_ REV__ENST00000496688.1_1_9:123589031-123593637:-|nuORF 8.751783647060863 0.8338564498997137 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEESG[MT]CKV 12 -1 + 53.497 0.0 0.0 4.0727 4.0727 75.105 0.0 0.0 0.0 38.89307341491321 0.8063478379339983 0.8063478379339983 3.38818556553381 0 0.3807196863200844 0.0 0.8494850021680094 0.3807196863200844 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEESG[MT]CKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEESG[MT]CVK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEES{[MS]|[{M(Oxidation (M))|F}A]}ACKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEESD[YN]KV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEES{[MS]|[{M(Oxidation (M))|F}A]}ACVK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEESD[YN]VK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEES{[MS]|[{M(Oxidation (M))|F}A]}[C(Carbamidomethyl (C))K]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AE[YN]{NN|[MP]|[D{I|L}]|[EV]}CKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AE[YN]{NN|[MP]|[D{I|L}]|[EV]}CVK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEES{[MS]|[{M(Oxidation (M))|F}A]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}K 4.0727;3.8147;3.7094;3.6427;3.4515;3.3848;2.9691;2.6002;2.3423;2.2816 -;-;-;-;-;-;-;-;-;- 217 + 1 1.367 53024.4 1.0 6208 5376 11581 HBL1_DMSO_200M_050219_1,11586 HBL1_DMSO_200M_050219_1,11586,TVMEICTARMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11587 59.821 50.0 1258500.0 25 0 313480.0 -1 0 98 348.2264191865828 694.4382854399656 2 348.2261230349541 MULTI CID FTMS 0 0 0 11581 1242029.875 0.8643841997918256 -1 0.1137809753417968 6 3 {I|L}{I|L}{I|L}HS{I|L} 6 -1 + 58.537 0.0 0.0 8.4293 8.4293 98.105 0.0 0.0 0.0 25.87282613361687 12.564048955115595 12.564048955115595 58.53662622350441 0 0.2614393726401688 2.0 0.9247425010840048 0.0 {I|L}{I|L}{I|L}HS{I|L} 8.4293 - 83 + 1 1.367 58141.0 1.0 6209 5376 11581 HBL1_DMSO_200M_050219_1,11587 HBL1_DMSO_200M_050219_1,11587, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11588 59.822 31.0 1114400.0 25 0 87958.0 + 1143 AGVSNTVQQV 10 72 501.76605667706673 1001.5175604209336 2 501.7663757205009 MULTI CID FTMS 0 0 0 11581 870696.625 0.6591817601194057 -2 0.2091026306152343 7 Unmodified _AGVSNTVQQV_ REV__ENSG00000006788|ENST00000252172|MYH13 14.838274106304384 0.5985701837916485 3 V 1 -1 12.474 0.0 0.0 1.2455 0.0 0.0 884.4381898538421 0.0 884.4381898538421 0.0 5.334237554869501 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2455 + + 59 + 1 1.367 33155.7 1.0 6210 5376 11581 HBL1_DMSO_200M_050219_1,11588 HBL1_DMSO_200M_050219_1,11588,AGVSNTVQQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11589 59.823 57.0 997920.0 25 0 83658.0 + 4011 DALRSGLTV 9 76 466.2646017200684 930.5146505069368 2 466.2643005251884 MULTI CID FTMS 0 0 0 11581 859339.0625 0.9826209605174964 1 -0.0664024353027343 8 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 40.23920728925047 0.0741434193262949 3 {[DA]|[EG]}{I|L}R[SG]{I|L}TV 9 0 + 55.028 0.0 0.0 5.9137 5.9137 89.649 0.0 0.0 0.0 15.334778045573074 20.76274388132952 15.334778045573074 14.488474775526186 0 1.6677353201839438 1.6989700043360187 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}R[SG]{I|L}TV;{[DA]|[EG]}{I|L}R[KT]EV;{[QN]|[E{I|L}]|[KN]}GR[SG]{I|L}TV;{[QN]|[E{I|L}]|[KN]}GR[KT]EV 5.9137;4.3566;3.3702;1.8131 +;-;-;- + 99 1 1.367 52535.2 1.0 6211 5376 11581 HBL1_DMSO_200M_050219_1,11589 HBL1_DMSO_200M_050219_1,11589,DALRSGLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11590 59.825 64.0 957400.0 25 0 136410.0 41657 VPPVTSIGI 9 66 441.7680744852922 881.5215960373844 2 441.7683898806572 MULTI CID FTMS 0 0 0 11581 839006.375 0.4482552604645805 -16 1.3482131958007812 9 Unmodified _VPPVTSIGI_ ENSG00000110660|ENST00000525815|SLC35F2;nc|ENSG00000110660|Q8IXU6-3|SLC35F2 16.942295170755138 0.3780752226737986 3 VPP{M(Oxidation (M))|F} 4 6 45.578 0.0 0.0 5.1704 0.0 0.0 0.0 438.2545565240844 438.2545565240844 30.974184576165342 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 VPP{M(Oxidation (M))|F} 5.1704 - 136 + 1 1.367 53444.8 1.0 6212 5376 11581 HBL1_DMSO_200M_050219_1,11590 HBL1_DMSO_200M_050219_1,11590,VPPVTSIGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11591 59.827 84.0 577050.0 25 0 48189.0 -1 YLFYCKNCRFY 11 64 788.8548433852268 1575.6951338372537 2 788.8552123904228 MULTI CID FTMS 0 0 0 11581 739011.4375 0.8064672846303929 2 -0.1961708068847656 10 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 3.2813086475875832 0.8596665074481906 3 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}QAQQNA{M(Oxidation (M))|F}Y 13 -1 + 58.124 0.0 0.0 3.6888 3.6888 76.757 0.0 0.0 0.0 3.878587098275759 46.13477005049983 3.878587098275759 5.740312677277188 0 0.6435078169319297 0.0 0.0 0.8494850021680094 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}QAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}QAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}QAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}QA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}N[MT]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MAQQGGA{M(Oxidation (M))|F}Y 3.6888;3.3245;3.113;3.113;3.113;3.113;3.0217;2.7487;2.7487;2.7487 -;-;-;-;-;-;-;-;-;- 1060 1 1.367 42344.6 1.0 6213 5376 11581 HBL1_DMSO_200M_050219_1,11591 HBL1_DMSO_200M_050219_1,11591,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11592 59.828 65.0 966230.0 25 0 211760.0 + 9827 FPEEEWRHV 9 75 410.1963560907189 1227.5672388723565 3 410.1961852908134 MULTI CID FTMS 0 0 0 11581 722685.625 0.9027205427423244 -2 0.2091026306152343 11 Unmodified _FPEEEWRHV_ ENSG00000197037|ENST00000394152|ZSCAN25;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 41.8396318013385 0.0653578398400075 3 {M(Oxidation (M))|F}PEEEWRHV 9 0 + 68.693 0.0 0.0 5.5959 5.5959 88.68 0.0 0.0 0.0 53.54290608678932 8.92790030352132 8.92790030352132 15.393812810524928 0 0.2396518287104437 0.0 0.8494850021680094 0.0 + + {M(Oxidation (M))|F}PEEEWRHV;[EP]E[K{I|L}][HC]{M(Oxidation (M))|F}PE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HC][K{I|L}]EEPE;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[HC][VS]RHV;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[HC]W[VG]HV;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[WQ]{I|L}YEV;[YV][HC]EWRHV;[YV]E[HC]WRHV 5.5959;4.3419;3.3991;2.9723;2.6263;2.4183;1.899;1.6537 +;-;-;-;-;-;-;- + 214 + 1 1.367 56007.0 1.0 6214 5376 11581 HBL1_DMSO_200M_050219_1,11592 HBL1_DMSO_200M_050219_1,11592,FPEEEWRHV True True FPEEEWRHV 59.828302 410.196185290813 54511729.75 11581.0 ENSG00000197037|ENST00000394152|ZSCAN25;;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 9.86434523264567 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11593 59.832 213.0 264450.0 25 0 16875.0 -1 FYEWECKQRMR 11 63 824.8709748356142 1647.7273967380283 2 824.8713867068291 MULTI CID FTMS 0 0 0 11581 509240.9375 0.8203734739175896 2 -0.1961708068847656 12 Carbamidomethyl (C),Oxidation (M) _FYEWEC(Carbamidomethyl (C))KQRM(Oxidation (M))R_ ENSG00000120658|ENST00000690772|ENOX1;nc|ENSG00000120658|Q8TC92-2|ENOX1 1.4819007175156935 0.86815623132643 3 EAQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 10 -1 77.696 0.0 0.0 4.7153 0.0 0.0 451.18126113105626 0.0 451.18126113105626 0.0 65.68881289407813 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 1.274227503252014 EAQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 4.7153 - 476 1 1.367 43646.0 1.0 6215 5376 11581 HBL1_DMSO_200M_050219_1,11593 HBL1_DMSO_200M_050219_1,11593,FYEWECKQRMR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11594 59.843 593.0 301520.0 25 0 69398.0 -1 0 75 1118.773317620365 3353.298123461296 3 1119.107836902142 MULTI CID FTMS 0 0 0 11581 490018.8125 1.0 0 0.0 13 3 G{[YC]|[HE]}T{I|L}TTT 8 -1 24.766 0.0 0.0 0.73854 0.0 0.0 1944.66982035363 565.2064913385374 2509.876311692168 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3441876774005248 0.0 G{[YC]|[HE]}T{I|L}TTT 0.73854 - 451 + 1 1.367 150498.3 1.0 6216 5376 11581 HBL1_DMSO_200M_050219_1,11594 HBL1_DMSO_200M_050219_1,11594, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11595 59.844 73.0 667940.0 25 0 63489.0 + 27737 PLLYVRVY 8 85 511.8033971844494 1021.5922414356988 2 511.8032104372978 MULTI CID FTMS 0 0 0 11581 441558.625 0.7944715986561898 -2 0.2091026306152343 14 Unmodified _PLLYVRVY_ REV__ENSG00000129990|ENST00000354308|SYT5;REV__ENSG00000158220|ENST00000389567|ESYT3;REV__nc|ENSG00000129990|O00445-2|SYT5 15.768221252438446 0.6779680726941459 3 {I|L}P 2 -1 42.206 0.0 0.0 4.1314 0.0 0.0 0.0 808.4329751889271 808.4329751889271 19.554687406276017 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {I|L}P 4.1314 - 53 + 1 1.367 46075.2 1.0 6217 5376 11581 HBL1_DMSO_200M_050219_1,11595 HBL1_DMSO_200M_050219_1,11595,PLLYVRVY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11596 59.856 643.0 421990.0 25 0 94627.0 -1 0 78 1123.4611095958624 3367.361499387788 3 1124.130419909954 MULTI CID FTMS 0 0 0 11581 440136.6875 0.057561728041871 -2 0.2091026306152343 15 3 GYYC(Carbamidomethyl (C)){M(Oxidation (M))|F}G 6 -1 22.115 0.0 0.0 0.65676 0.0 0.0 1254.4359145262622 1362.642513257141 2617.078427783403 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYYC(Carbamidomethyl (C)){M(Oxidation (M))|F}G 0.65676 - 138 + 1 1.367 227208.0 1.0 6218 5376 11581 HBL1_DMSO_200M_050219_1,11596 HBL1_DMSO_200M_050219_1,11596, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11597 59.857 73.0 620830.0 25 0 50815.0 + 22615 LPYKPVQL 8 74 479.29359712697976 956.5726413207595 2 479.2938720583916 MULTI CID FTMS 0 0 0 11581 442428.125 1.0 0 0.0 16 Unmodified _LPYKPVQL_ REV__ENSG00000102313|ENST00000218436|ITIH6 13.50788311687929 0.7113601687236069 3 {I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}R[PA] 8 -1 + 15.583 0.0 0.0 1.6291 1.6291 66.129 0.0 0.0 0.0 3.364875295848437 0.5115252244738144 0.5115252244738144 0.5115252244738144 0 0.0 0.0 0.0 0.0 {I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}R[PA];{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}[NP]{I|L};{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}[QP]V;{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}[VG][PA] 1.6291;1.5756;1.4087;0.66082 -;-;-;- 112 + 1 1.367 48001.3 1.0 6219 5376 11581 HBL1_DMSO_200M_050219_1,11597 HBL1_DMSO_200M_050219_1,11597,LPYKPVQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11598 59.859 83.0 666980.0 25 0 65038.0 + 11342 GFLGGAKAM 9 83 426.225803868147 850.437054803094 2 426.2256042361259 MULTI CID FTMS 0 0 0 11581 389233.78125 1.0 0 0.0 17 Unmodified _GFLGGAKAM_ ENSG00000131269|ENST00000373394|ABCB7;nc|ENSG00000131269|O75027-2|ABCB7 15.847184025352805 0.4077185912009129 3 [KA]NYG{I|L}W 7 8 + 33.421 0.0 0.0 3.9299 3.9299 70.18 0.0 0.0 0.0 0.5799194697768684 18.88643386405004 0.5799194697768684 0.6694678963061307 0 0.4247425010840047 0.0 0.0 0.0 [KA]NYG{I|L}W;[KQ]GYG{I|L}W;[KA]GGYG{I|L}W;[YV][RD]{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[RD]{I|L}M;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[RD]M{I|L};[KA]NA[YV]W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[RD]P{M(Oxidation (M))|F};[KQ]GA[YV]W;[KQ][YN]{I|L}W 3.9299;3.8511;3.6898;3.1658;2.6845;2.4931;2.2861;2.2452;2.2074;2.1721 -;-;-;-;-;-;-;-;-;- 374 1 1.367 49622.5 1.0 6220 5376 11581 HBL1_DMSO_200M_050219_1,11598 HBL1_DMSO_200M_050219_1,11598,GFLGGAKAM False True GFLGGAKAM 59.859324 426.225604236126 2783578.25 11581.0 nc|ENSG00000131269|O75027-2|ABCB7;;ENSG00000131269|ENST00000373394|ABCB7 3.793225924173991 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11599 59.861 75.0 537080.0 25 0 67006.0 + 26574 NVLPRTVSV 9 68 492.7954945668971 983.5764362005942 2 492.7956725955009 MULTI CID FTMS 0 0 0 11581 302136.9375 0.3463834879768693 -2 0.2091026306152343 18 Unmodified _NVLPRTVSV_ ENSG00000129810|ENST00000412997|SGO1;nc|ENSG00000129810|Q5FBB7|SGO1 24.020572477871973 0.2255576514309169 3 {[NV]|[RG]}{I|L}V 4 5 23.94 0.0 0.0 2.434 0.0 0.0 0.0 555.2882174127561 555.2882174127561 11.175952772115174 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {[NV]|[RG]}{I|L}V 2.434 - 38 + 1 1.367 39272.2 1.0 6221 5376 11581 HBL1_DMSO_200M_050219_1,11599 HBL1_DMSO_200M_050219_1,11599,NVLPRTVSV False True NVLPRTVSV 59.861056 492.795672595501 10831972.0 11581.0 ENSG00000129810|ENST00000412997|SGO1;;nc|ENSG00000129810|Q5FBB7|SGO1 5.276633580525716 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11600 59.873 641.0 233630.0 25 0 13752.0 + 9829 FPEEEWRHV 9 158 614.7912418782817 1227.5679308233632 2 614.7924072146416 MULTI CID FTMS 0 0 0 11581 248671.828125 1.0 0 0.0 19 Unmodified _FPEEEWRHV_ ENSG00000197037|ENST00000394152|ZSCAN25;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 61.60191391372663 0.0251951588191061 3 {M(Oxidation (M))|F}PEEEWRHV 9 0 + 76.01 0.0 0.0 6.1919 6.1919 77.679 0.0 0.0 0.0 5.300084529637985 0.796896906561031 0.796896906561031 0.796896906561031 0 1.3539171939081172 0.0 0.7614393726401688 0.3252574989159953 + + {M(Oxidation (M))|F}PEEEWRHV;{M(Oxidation (M))|F}PEEEWRVH;[EP]RP[{M(Oxidation (M))|F}V]EEPE;[EP]R[{I|L}T]EEEPE;{M(Oxidation (M))|F}PEEE[{I|L}T]QHV;{M(Oxidation (M))|F}PEE[{M(Oxidation (M))|F}V]PQHV;[EP][VG]P[{M(Oxidation (M))|F}V]EEPE;{M(Oxidation (M))|F}PEE[{M(Oxidation (M))|F}V]PQVH;{M(Oxidation (M))|F}PEEE[{I|L}T]QVH;{M(Oxidation (M))|F}PEEEV[WR]H 6.1919;6.127;5.7602;5.7602;4.8079;4.8079;4.7486;4.743;4.743;4.6214 +;-;-;-;-;-;-;-;-;- + 1889 + 1 1.367 111430.8 1.0 6222 5376 11581 HBL1_DMSO_200M_050219_1,11600 HBL1_DMSO_200M_050219_1,11600,FPEEEWRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11601 59.877 157.0 334900.0 25 0 26762.0 -1 LEMDKNLQGR 10 81 407.2081415597239 1218.6025952793716 3 407.2078735232353 MULTI CID FTMS 0 0 0 11581 196478.828125 1.0 0 0.0 20 Oxidation (M) _LEM(Oxidation (M))DKNLQGR_ ENSG00000154781|ENST00000383794|CCDC174;ENST00000465759.1_1_3:14693292-14708492:+|nuORF 6.1918466704503565 0.6979955778746556 3 {M(Oxidation (M))|F}PKPV 5 -1 14.412 0.0 0.0 1.1827 0.0 0.0 632.2800987967529 0.0 632.2800987967529 0.0 1.9807836084080763 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}PKPV 1.1827 - 135 + 1 1.367 50079.9 1.0 6223 5376 11581 HBL1_DMSO_200M_050219_1,11601 HBL1_DMSO_200M_050219_1,11601,LEMDKNLQGR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11603 59.881 58.0 778550.0 25 0 103270.0 + 2935 AVHDSFVAV 9 78 472.7454644160763 943.4763758989526 2 472.7456848025322 MULTI CID FTMS 0 0 0 11602 802686.625 0.6820429468196042 1 -0.1297683715820312 1 Unmodified _AVHDSFVAV_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 53.57557251787612 0.0325303259649373 3 {[VA]|[{I|L}G]}HDS{M(Oxidation (M))|F}VAV 9 0 + 52.344 0.0 0.0 5.548 5.548 89.079 0.0 0.0 0.0 15.528198119064776 36.859051454151945 15.528198119064776 19.305785912415303 0 0.8182503180159344 1.3979400086720375 0.7742275032520141 0.0 + + {[VA]|[{I|L}G]}HDS{M(Oxidation (M))|F}VAV;[HD]{[VA]|[{I|L}G]}S{M(Oxidation (M))|F}VAV;{[VA]|[{I|L}G]}[NG][WE]VAV 5.548;3.5017;2.1599 +;-;- + 114 1 1.367 39724.4 1.0 6224 5377 11602 HBL1_DMSO_200M_050219_1,11603 HBL1_DMSO_200M_050219_1,11603,AVHDSFVAV True True AVHDSFVAV 59.881035 472.745684802532 18116640.0 11602.0 ENSG00000080345|ENST00000444746|RIF1;;nc|ENSG00000080345|Q5UIP0-2|RIF1 7.709403038024902 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11604 59.884 150.0 436240.0 25 0 49643.0 + 1377 ALAEKFKEL 9 109 524.8053008176081 1047.596048702016 2 524.8054687380791 MULTI CID FTMS 0 0 0 11602 391246.3125 0.0636853004151425 4 -0.39947509765625 2 Unmodified _ALAEKFKEL_ ENSG00000124541|ENST00000244496|RRP36;nc|ENSG00000124541|Q96EU6-2|RRP36 28.49450938151212 0.1686335738423394 3 A{I|L}AEK{M(Oxidation (M))|F}{[SA]|[TG]}{I|L}V 10 3 + 66.412 0.0 0.0 6.3395 6.3395 85.744 0.0 0.0 0.0 35.02697515943353 6.28388930050312 6.28388930050312 6.28388930050312 0 1.110924374808178 2.0 0.0 0.0 A{I|L}AEK{M(Oxidation (M))|F}{[SA]|[TG]}{I|L}V;A{I|L}AEK{M(Oxidation (M))|F}{[SA]|[TG]}V{I|L};A{I|L}AEK{M(Oxidation (M))|F}[VG]T{I|L};[{I|L}A][WP]G[RH]{I|L}V;[{I|L}A]GY[KA][DV]{I|L}V;[{I|L}A]G[WP][RH]{I|L}V;[VP][RD]G[RH]{I|L}V;[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[RH]{I|L}V 6.3395;5.7397;5.219;2.5855;1.7788;1.6108;1.1537;0.1789 -;-;-;-;-;-;-;- 472 + 1 1.367 56183.5 1.0 6225 5377 11602 HBL1_DMSO_200M_050219_1,11604 HBL1_DMSO_200M_050219_1,11604,ALAEKFKEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11605 59.885 34.0 2419400.0 25 0 305150.0 25010 MPQHIKITV 9 94 356.2071449024239 1065.5996053074718 3 356.2070800662041 MULTI CID FTMS 0 0 0 11602 1216732.125 1.0 0 0.0 3 Unmodified _MPQHIKITV_ ENSG00000078747|ENST00000374864|ITCH;ENST00000483727.5_1_20:33033173-33065666:+|nuORF;nc|ENSG00000289720|Q96J02-3|ITCH;nc|ENSG00000289720|Q96J02|ITCH 17.44264345198275 0.3645313841742926 3 [QP]H{I|L}K 5 4 25.406 0.0 0.0 2.3842 0.0 0.0 0.0 459.2252516299906 459.2252516299906 10.580619962282205 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + [QP]H{I|L}K 2.3842 + + 94 1 1.367 75030.8 1.0 6226 5377 11602 HBL1_DMSO_200M_050219_1,11605 HBL1_DMSO_200M_050219_1,11605,MPQHIKITV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11606 59.887 90.0 1252100.0 25 0 174050.0 + 21213 LPDGRIIKV 9 113 337.5500828701165 1009.6284192105496 3 337.5497314333916 MULTI CID FTMS 0 0 0 11602 792801.1875 0.9257595222676988 1 -0.1297683715820312 4 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 51.41523569358685 0.0372669606867193 3 {I|L}P[MT]KPPK 8 6 43.67 0.0 0.0 4.3254 0.0 0.0 0.0 114.05652033023672 114.05652033023672 -7.511037044048763 0.0 -7.511037044048763 0.0 0 0.0 1.3979400086720375 0.0 0.6237125054200234 {I|L}P[MT]KPPK 4.3254 - 662 + 1 1.367 97776.8 1.0 6227 5377 11602 HBL1_DMSO_200M_050219_1,11606 HBL1_DMSO_200M_050219_1,11606,LPDGRIIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11607 59.889 54.0 959020.0 25 0 49638.0 40115 VGLFLTIYN 9 97 520.2931310373273 1038.5717091414544 2 521.8001586794853 MULTI CID FTMS 0 0 0 11602 523172.875 0.95196745820199 1 -0.1297683715820312 5 Unmodified _VGLFLTIYN_ nc|ENSG00000133475|P36268-2|GGT2P;nc|ENSG00000133475|P36268-3|GGT2P;nc|ENSG00000133475|P36268|GGT2P;nc|ENSG00000197421|A6NGU5|GGT3P 9.347437153973935 0.588369872918737 3 PSC{I|L} 4 8 19.795 0.0 0.0 1.906 0.0 0.0 153.07988821287125 482.27341638736567 635.3533046002369 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 PSC{I|L} 1.906 - 404 + 1 1.367 48524.0 1.0 6228 5377 11602 HBL1_DMSO_200M_050219_1,11607 HBL1_DMSO_200M_050219_1,11607,VGLFLTIYN False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11608 59.89 56.0 1226300.0 25 0 77001.0 + 24845 VANRYFTTV 9 109 535.2940388764163 0 535.2924072146416 PEAK CID FTMS 0 0 0 11602 447487.28125 1.0 0 0.0 6 Unmodified _MPLPRQQVT_ ENSG00000165219|ENST00000297933|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1;nc|ENSG00000165219|Q14C86-3|GAPVD1;ENST00000474637.5_1_9:128108952-128125022:+|nuORF;nc|ENSG00000165219|Q14C86-5|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;ENST00000467707.1_1_9:128116999-128121864:+|nuORF;nc|ENSG00000165219|Q14C86|GAPVD1 26.268140514670165 0.1442484609216422 3 PP{I|L} 3 7 16.727 0.0 0.0 1.5653 0.0 0.0 131.0375557646625 627.3207793690771 758.3583351337395 0.0 0.0 0.0 0.0 0 0.6549471895720984 0.0 0.0 0.0 PP{I|L} 1.5653 - 186 + 1 1.367 63180.8 1.0 6229 5377 11602 HBL1_DMSO_200M_050219_1,11608 HBL1_DMSO_200M_050219_1,11608,MPLPRQQVT False False VANRYFTTV 59.890028 535.292407214642 8820442.0 11602.0 ENSG00000165219|ENST00000297933|GAPVD1;;nc|ENSG00000165219|Q14C86-6|GAPVD1;;nc|ENSG00000165219|Q14C86-3|GAPVD1;;ENST00000474637.5_1_9:128108952-128125022:+|nuORF;;nc|ENSG00000165219|Q14C86-5|GAPVD1;;nc|ENSG00000165219|Q14C86-4|GAPVD1;;ENST00000467707.1_1_9:128116999-128121864:+|nuORF;;nc|ENSG00000165219|Q14C86|GAPVD1 3.44447660446167 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11609 59.892 99.0 663680.0 25 0 52955.0 + -1 KIAEIEAEM 9 106 517.265411871655 0 517.2647582888603 PEAK CID FTMS 0 0 0 11602 402183.53125 0.5164402573446796 1 -0.1297683715820312 7 Carbamidomethyl (C) _DVDLVC(Carbamidomethyl (C))ITV_ ENSG00000185721|ENST00000331457|DRG1;ENST00000433341.5_1_22:31795606-31819296:+|nuORF 23.1484247019978 0.1725298825155634 3 EAE{I|L}K{I|L} 6 -1 20.583 0.0 0.0 1.9935 0.0 0.0 149.0538817493662 197.05690942935783 346.11079117872407 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 EAE{I|L}K{I|L} 1.9935 - 337 + 1 1.367 56309.8 1.0 6230 5377 11602 HBL1_DMSO_200M_050219_1,11609 HBL1_DMSO_200M_050219_1,11609,DVDLVCITV False False KIAEIEAEM 59.892178 517.26475828886 5629890.5 11602.0 ENSG00000185721|ENST00000331457|DRG1;;ENST00000433341.5_1_22:31795606-31819296:+|nuORF -0.4825689842303594 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11610 59.897 282.0 493340.0 25 0 44844.0 + 18745 ALLGKIEKV 9 158 485.8184652255924 0 485.8184387087822 PEAK CID FTMS 0 0 0 11602 301657.1875 0.903783031327365 1 -0.1297683715820312 8 Unmodified _LALPFAILL_ nc|ENSG00000143641|Q10471-2|GALNT2;ENSG00000143641|ENST00000366672|GALNT2 20.871210003555333 0.1931737080476581 3 {I|L}GK{M(Oxidation (M))|F}{I|L} 5 6 15.138 0.0 0.0 1.5612 0.0 0.0 184.1201870244745 224.1294954889281 408.2496825134027 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}GK{M(Oxidation (M))|F}{I|L} 1.5612 - 521 + 1 1.367 110081.9 1.0 6231 5377 11602 HBL1_DMSO_200M_050219_1,11610 HBL1_DMSO_200M_050219_1,11610,LALPFAILL False False ALLGKIEKV 59.897366 485.818438708782 2497903.25 11602.0 nc|ENSG00000143641|Q10471-2|GALNT2;;ENSG00000143641|ENST00000366672|GALNT2 2.6511245568593345 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11611 59.909 639.0 434720.0 25 0 56568.0 -1 IECDMCQDWFH 11 165 778.782551017107 1555.550549101014 2 778.7827026247978 MULTI CID FTMS 0 0 0 11602 294362.75 0.1510571618956275 -3 0.2755050659179687 9 2 Carbamidomethyl (C),Oxidation (M) _IEC(Carbamidomethyl (C))DM(Oxidation (M))C(Carbamidomethyl (C))QDWFH_ ENSG00000172943|ENST00000338154|PHF8;ENST00000462182.1_1_X:54066489-54069146:-|nuORF;nc|ENSG00000172943|Q9UPP1-3|PHF8;nc|ENSG00000172943|Q9UPP1-4|PHF8;nc|ENSG00000172943|Q9UPP1-5|PHF8;nc|ENSG00000172943|Q9UPP1|PHF8 0.3506318815782774 0.8734936314171269 3 YESGMYV{M(Oxidation (M))|F}{[QG]|[NA]} 10 -1 56.046 0.0 0.0 3.6029 0.0 0.0 376.0874195783219 0.0 376.0874195783219 0.0 17.50126936525401 0.0 0.0 0 0.5 0.0 1.3076556684809653 0.0 YESGMYV{M(Oxidation (M))|F}{[QG]|[NA]} 3.6029 - 3786 1 1.367 191167.3 1.0 6232 5377 11602 HBL1_DMSO_200M_050219_1,11611 HBL1_DMSO_200M_050219_1,11611,IECDMCQDWFH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11612 59.911 108.0 724490.0 25 0 51877.0 + 25364 NAYDNHVFV 9 112 539.7510810939083 1077.4876092546165 2 539.7513915896416 MULTI CID FTMS 0 0 0 11602 223651.625 0.2880372133906065 -1 0.0664024353027343 10 Unmodified _NAYDNHVFV_ ENSG00000092439|ENST00000646667|TRPM7 10.823927491677226 0.5436922275383211 3 {[QG]|[NA]}Y 3 6 23.299 0.0 0.0 2.1624 0.0 0.0 0.0 726.3203783798696 726.3203783798696 0.2063535875006081 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.1643943297944484 + {[QG]|[NA]}Y 2.1624 + + 667 1 1.367 66790.6 1.0 6233 5377 11602 HBL1_DMSO_200M_050219_1,11612 HBL1_DMSO_200M_050219_1,11612,NAYDNHVFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11613 59.915 213.0 554890.0 25 0 41095.0 + 44751 YPLESRPSL 9 148 531.284699392504 1060.5548458518078 2 531.2839233279228 MULTI CID FTMS 0 0 0 11602 264359.96875 0.6255091978741534 3 -0.3463020324707031 11 Unmodified _YPLESRPSL_ ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1 45.69961567697781 0.0497987121815769 3 YP{I|L}E 4 5 61.899 0.0 0.0 5.8365 0.0 0.0 0.0 555.2890255764854 555.2890255764854 40.72805036539442 0.0 0.0 0.0 0 0.6421590589602533 1.6989700043360187 0.6549471895720984 0.0 + YP{I|L}E 5.8365 + + 1330 + 1 1.367 101562.9 1.0 6234 5377 11602 HBL1_DMSO_200M_050219_1,11613 HBL1_DMSO_200M_050219_1,11613,YPLESRPSL True True YPLESRPSL 59.914884 531.283923327923 14263072.0 11602.0 ENSG00000137497|ENST00000393695|NUMA1;;nc|ENSG00000137497|Q14980-2|NUMA1;;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;;nc|ENSG00000137497|Q14980-5|NUMA1 5.641806284586589 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11614 59.921 336.0 432410.0 25 0 41453.0 + + 45322 SYLDARSL 8 140 462.7428278360616 0 462.7427856326103 PEAK CID FTMS 0 0 0 11602 197782.375 1.0 0 0.0 12 Unmodified _YSIVGRTE_ nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11;ENSG00000072803|ENST00000517395|FBXW11 13.90604991867851 0.4976509803484061 3 {I|L}D 2 -1 14.464 0.0 0.0 1.5663 0.0 0.0 250.09565385397144 442.2418062023557 692.3374600563271 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {I|L}D 1.5663 - 77 + 1 1.367 115524.0 1.0 6235 5377 11602 HBL1_DMSO_200M_050219_1,11614 HBL1_DMSO_200M_050219_1,11614,YSIVGRTE False False SYLDARSL 59.920962 462.74278563261 3029928.75 11602.0 nc|ENSG00000072803|Q9UKB1-2|FBXW11;;nc|ENSG00000072803|Q9UKB1-3|FBXW11;;nc|ENSG00000072803|Q9UKB1|FBXW11;;ENSG00000072803|ENST00000517395|FBXW11 4.934142112731934 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11615 59.935 800.0 314520.0 25 0 34332.0 + 42622 VTTEPIPL 8 219 435.2511139900161 868.4876750468321 2 435.2508117556572 MULTI CID FTMS 0 0 0 11602 171231.0625 0.1484893762528821 -15 1.3923683166503906 13 Unmodified _VTTEPIPL_ REV__ENSG00000048342|ENST00000424120|CC2D2A;REV__nc|ENSG00000048342|Q9P2K1-2|CC2D2A 10.183394434864962 0.7604730176254005 3 {I|L} 1 -1 12.474 0.0 0.0 1.4363 0.0 0.0 737.3927786618697 0.0 737.3927786618697 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4363 + + 213 + 1 1.367 194947.6 0.8500000238418579 6236 5377 11602 HBL1_DMSO_200M_050219_1,11615 HBL1_DMSO_200M_050219_1,11615,VTTEPIPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11616 59.939 231.0 315260.0 25 0 27117.0 + 18741 LALKEKEFA 9 99 350.2063430724648 1047.5971998175944 3 350.2060119509697 MULTI CID FTMS 0 0 0 11602 171134.859375 0.0434157697603784 4 -0.39947509765625 14 Unmodified _LALKEKEFA_ REV__ENSG00000168016|ENST00000645898|TRANK1;REV__nc|ENSG00000168016|O15050|TRANK1 5.230669730166228 0.7320841359114558 3 {M(Oxidation (M))|F} 1 -1 11.42 0.0 0.0 1.0901 0.0 0.0 882.517928432632 0.0 882.517928432632 0.0 1.1423966425768484 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0901 + + 27 + 1 1.367 66702.3 1.0 6237 5377 11602 HBL1_DMSO_200M_050219_1,11616 HBL1_DMSO_200M_050219_1,11616,LALKEKEFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11617 59.953 800.0 124970.0 25 0 9009.2 -1 0 120 911.91336992036 1821.81218690752 2 912.4161865115166 MULTI CID FTMS 0 0 0 11602 167257.0625 0.5595791790968782 -1 0.0664024353027343 15 3 {[DA]|[EG]}V[C(Carbamidomethyl (C))M]YETVS[QP]R 13 -1 47.555 0.0 0.0 2.6103 0.0 0.0 0.0 282.1229528589451 282.1229528589451 7.285344689611115 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.4247425010840047 {[DA]|[EG]}V[C(Carbamidomethyl (C))M]YETVS[QP]R 2.6103 - 2609 1 1.367 70653.0 0.949999988079071 6238 5377 11602 HBL1_DMSO_200M_050219_1,11617 HBL1_DMSO_200M_050219_1,11617, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11618 59.968 800.0 98183.0 25 0 22222.0 -1 0 53 1128.7926742350755 3383.356193305427 3 1129.125537097454 MULTI CID FTMS 0 0 0 11602 152646.171875 0.9568046178811656 -1 0.0664024353027343 16 3 D 1 -1 6.9897 0.0 0.0 0.20659 0.0 0.0 2452.955815963433 812.3514498346311 3265.307265798064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.20659 - 70 + 1 1.367 73202.6 0.6600000262260437 6239 5377 11602 HBL1_DMSO_200M_050219_1,11618 HBL1_DMSO_200M_050219_1,11618, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11619 59.974 316.0 355570.0 25 0 17403.0 + 26683 NYLTRIHY 8 141 360.52570450254507 1078.5552841078352 3 360.5254699587822 MULTI CID FTMS 0 0 0 11602 153892.703125 0.9466058645521316 -1 0.0664024353027343 17 Unmodified _NYLTRIHY_ ENSG00000067064|ENST00000381344|IDI1;nc|ENSG00000067064|Q13907|IDI1 18.1463463914782 0.6428359029697936 3 [YN]{I|L}T[R{I|L}]HY 8 0 + 28.07 0.0 0.0 2.6025 2.6025 77.505 0.0 0.0 0.0 13.465781442533364 0.6348625752110664 0.6348625752110664 9.1397932942207 0 0.0 1.0 0.4247425010840047 0.0 + + [YN]{I|L}T[R{I|L}]HY;[YN]{I|L}T{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}V 2.6025;1.7551 +;- + 83 + 1 1.367 94453.4 1.0 6240 5377 11602 HBL1_DMSO_200M_050219_1,11619 HBL1_DMSO_200M_050219_1,11619,NYLTRIHY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11620 59.988 800.0 203950.0 25 0 29154.0 + 30303 QYTWYLYYGKP 11 117 741.3554047417368 1480.6962565502736 2 741.3563720583916 MULTI CID FTMS 0 0 0 11602 152132.6875 0.7357903327204828 -1 0.0664024353027343 18 Unmodified _QYTWYLYYGKP_ REV__ENSG00000137841|ENST00000260402|PLCB2;REV__ENST00000558588.5_1_15:40583969-40599873:-|nuORF;REV__nc|ENSG00000137841|Q00722-2|PLCB2;REV__nc|ENSG00000137841|Q00722-3|PLCB2 11.494710602746466 0.7960433852372589 3 {[QV]|[N{I|L}]|[RA]|[KV]}MPVSGTQG{I|L} 11 -1 59.975 0.0 0.0 4.0505 0.0 0.0 0.0 380.1246982829486 380.1246982829486 36.76160345352209 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.3996498648046138 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}MPVSGTQG{I|L} 4.0505 - 2265 1 1.367 118233.3 0.8299999833106995 6241 5377 11602 HBL1_DMSO_200M_050219_1,11620 HBL1_DMSO_200M_050219_1,11620,QYTWYLYYGKP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11621 60.003 800.0 308740.0 25 0 26215.0 + 19925 LIATDWCLATV 11 178 603.3168334163437 1204.6191138994873 2 603.3160888552666 MULTI CID FTMS 0 0 0 11602 146600.640625 0.3259601771956027 -3 0.2755050659179687 19 Unmodified _LIATDWCLATV_ REV__ENSG00000110756|ENST00000349215|HPS5;REV__nc|ENSG00000110756|Q9UPZ3-2|HPS5 32.89776655970281 0.3218023389984559 3 {I|L}{I|L}A{M(Oxidation (M))|F}AE{I|L}K 8 -1 84.902 0.0 0.0 7.048 0.0 0.0 0.0 316.0435885065063 316.0435885065063 54.609925004896674 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.805462187404089 0.0 {I|L}{I|L}A{M(Oxidation (M))|F}AE{I|L}K 7.048 - 7657 + 1 1.367 178901.6 0.8500000238418579 6242 5377 11602 HBL1_DMSO_200M_050219_1,11621 HBL1_DMSO_200M_050219_1,11621,LIATDWCLATV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11622 60.006 179.0 423100.0 25 0 32246.0 28025 PNGGGGGG 8 96 572.2427727992814 571.2354963326814 1 573.2453491091728 MULTI CID FTMS 0 0 0 11602 134021.96875 0.7371247959295656 -1 0.0664024353027343 20 Unmodified _PNGGGGGG_ ENSG00000135446|ENST00000257904|CDK4;ENSG00000178695|ENST00000377474|KCTD12;ENST00000551706.1_1_12:58145281-58145962:-|nuORF 0.0 0.8243325171867699 3 E{M(Oxidation (M))|F} 2 8 26.498 0.0 0.0 4.6387 0.0 0.0 277.1138055141251 0.0 277.1138055141251 0.0 15.784634594678266 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 E{M(Oxidation (M))|F} 4.6387 - 35 + 1 1.367 64184.8 1.0 6243 5377 11602 HBL1_DMSO_200M_050219_1,11622 HBL1_DMSO_200M_050219_1,11622,PNGGGGGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11624 60.011 8.2 7207500.0 25 0 557700.0 + 22110 LPPPVQTQI 9 90 496.7924844808842 991.5704160285684 2 496.7926513552666 MULTI CID FTMS 0 0 0 11623 7212713.0 1.0 0 0.0 1 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 61.357469665136826 0.0253304979873734 3 [{I|L}P]PPVQTQ{I|L} 9 0 + 63.227 0.0 0.0 6.3765 6.3765 79.021 0.0 0.0 0.0 25.6424927368726 34.99566014384057 25.6424927368726 1.249387366082999 0 0.9124379954164592 2.0 0.0 0.0 + + [{I|L}P]PPVQTQ{I|L};[{I|L}P]PNP{I|L}TQ{I|L};[{I|L}P]PPN{I|L}TQ{I|L};[{I|L}P]PNTP{I|L}Q{I|L};[{I|L}P]PNTQ[{I|L}P]{I|L};[{I|L}P]PNPT{I|L}Q{I|L};[{I|L}P]PPV[AG]TQ{I|L};[{I|L}P]PPNT{I|L}Q{I|L};[{I|L}P]NPP{I|L}TQ{I|L};[{I|L}P]PGGP{I|L}TQ{I|L} 6.3765;6.2505;6.0729;5.6832;5.6357;5.6029;5.4478;5.4253;5.3982;5.3218 +;-;-;-;-;-;-;-;-;- + 860 1 1.379 50060.7 1.0 6244 5378 11623 HBL1_DMSO_200M_050219_1,11624 HBL1_DMSO_200M_050219_1,11624,LPPPVQTQI True True LPPPVQTQI 60.010803 496.792651355267 725932272.0 11623.0 ENST00000511107.1_1_5:60241248-60448779:+|nuORF;;ENSG00000164182|ENST00000296597|NDUFAF2 4.657301584879558 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11625 60.012 47.0 1593700.0 25 0 236720.0 + 44637 YPFKPPKV 8 93 325.86048683472575 974.5596311043772 3 325.8600341677666 MULTI CID FTMS 0 0 0 11623 1052882.375 0.0136503156984914 11 -0.8839340209960938 2 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 15.847184025352805 0.6768015514314958 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 39.149 0.0 0.0 4.0171 4.0171 84.742 0.0 0.0 0.0 18.7170110131429 6.920179638816997 6.920179638816997 27.26458608585606 0 0.0 0.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.0171;1.2194;0.91056 +;-;- + 113 + 1 1.379 66888.5 1.0 6245 5378 11623 HBL1_DMSO_200M_050219_1,11625 HBL1_DMSO_200M_050219_1,11625,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11626 60.013 18.0 4353100.0 25 0 705770.0 + 13831 HTVEDLVKV 9 99 520.2931310373273 1038.5717091414544 2 520.2932617068291 MULTI CID FTMS 0 0 0 11623 3211353.75 1.0 0 0.0 3 Unmodified _HTVEDLVKV_ ENSG00000177084|ENST00000320574|POLE 63.960520009940105 0.0238892913700936 3 [HT]VED{I|L}VKV 9 0 + 75.963 0.0 0.0 7.3142 7.3142 92.657 0.0 0.0 0.0 10.20181229336984 61.98345295220973 10.20181229336984 10.204262829037845 0 1.4666152729074455 0.7958800173440752 1.3494850021680094 0.0 + + [HT]VED{I|L}VKV;{[TV]|[{I|L}S]}HED{I|L}VKV;[HT]V[YG]HVKV;[HT][YR]HVKV;{[TV]|[{I|L}S]}QQTHVKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}THVKV;{[TV]|[{I|L}S]}H[YG]HVKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V[HT]{I|L}VKV;{[QV]|[N{I|L}]|[RA]|[KV]}[DN]THVKV;{[HG]|PP}[YV]THVKV 7.3142;6.3316;5.3896;5.2253;4.5766;4.4294;4.4071;4.2856;4.1665;3.9969 +;-;-;-;-;-;-;-;-;- + 369 1 1.379 63741.4 1.0 6246 5378 11623 HBL1_DMSO_200M_050219_1,11626 HBL1_DMSO_200M_050219_1,11626,HTVEDLVKV True True HTVEDLVKV 60.013248 520.293261706829 46159996.0 11623.0 ENSG00000177084|ENST00000320574|POLE 4.964449803034465 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11627 60.014 14.0 3086300.0 25 0 454590.0 15275 IPHQKDPAL 9 93 509.78739779112425 1017.5602426490484 2 509.7878295779228 MULTI CID FTMS 0 0 0 11623 2507147.25 0.2875053466890663 -2 0.1961708068847656 4 Unmodified _IPHQKDPAL_ ENSG00000122367|ENST00000361373|LDB3;nc|ENSG00000122367|O75112-4|LDB3;nc|ENSG00000122367|O75112-5|LDB3;nc|ENSG00000122367|O75112-7|LDB3 29.081581746732265 0.1611639662936252 3 {I|L}P 2 7 33.416 0.0 0.0 3.284 0.0 0.0 0.0 804.3984050151229 804.3984050151229 5.224928274552596 0.0 0.0 0.0 0 0.2614393726401688 1.2218487496163564 0.0 0.0 + {I|L}P 3.284 + + 97 + 1 1.379 41208.9 1.0 6247 5378 11623 HBL1_DMSO_200M_050219_1,11627 HBL1_DMSO_200M_050219_1,11627,IPHQKDPAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11628 60.016 23.0 2770700.0 25 0 252770.0 + 45641 YVPETVYRV 9 59 563.3004221509449 1124.5862913686897 2 563.3008300662041 MULTI CID FTMS 0 0 0 11623 2065880.625 1.0 0 0.0 5 Unmodified _YVPETVYRV_ ENSG00000082701|ENST00000264235|GSK3B;ENSG00000105723|ENST00000222330|GSK3A;nc|ENSG00000082701|P49841-2|GSK3B 29.081581746732265 0.1611639662936252 3 [YV]PETVRYV 9 2 + 64.887 0.0 0.0 5.7699 5.7699 89.04 0.0 0.0 0.0 38.8566032266867 4.609178215846654 4.609178215846654 14.151603310239906 0 0.6989700043360187 2.0 0.805462187404089 0.0 [YV]PETVRYV;[EP]TV[{I|L}P]EP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[TP]EV[{I|L}P]EP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[EP]TV[{I|L}P][HA]YV;[TP]EV[{I|L}P][HA]YV 5.7699;4.5115;3.1573;1.8716;0.51746 -;-;-;-;- 77 + 1 1.379 57854.9 1.0 6248 5378 11623 HBL1_DMSO_200M_050219_1,11628 HBL1_DMSO_200M_050219_1,11628,YVPETVYRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11629 60.017 33.0 2102100.0 25 0 365020.0 15204 IPEYLIHL 8 70 499.2873259038439 996.5600988744876 2 499.2872497439384 MULTI CID FTMS 0 0 0 11623 1659260.75 0.4975966022401823 2 -0.2165336608886718 6 Unmodified _IPEYLIHL_ ENSG00000214694|ENST00000409978|ARHGEF33;nc|ENSG00000214694|A8MVX0|ARHGEF33 42.96799951952854 0.1846367511955703 3 {I|L}PEP 4 5 59.909 0.0 0.0 6.0116 0.0 0.0 0.0 557.3055513971311 557.3055513971311 48.12652612791558 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.4247425010840047 0.0 {I|L}PEP 6.0116 - 39 + 1 1.379 57288.2 1.0 6249 5378 11623 HBL1_DMSO_200M_050219_1,11629 HBL1_DMSO_200M_050219_1,11629,IPEYLIHL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11630 60.018 57.0 1575100.0 25 0 230380.0 + 41127 VPAALKVV 8 88 398.7681654055314 795.5217778778629 2 398.7679931521416 MULTI CID FTMS 0 0 0 11623 1157005.875 0.1092801492436237 -2 0.1961708068847656 7 Unmodified _VPAALKVV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 81.86404211737425 0.0837039284849515 3 VPAA{I|L}KVV 8 0 + 71.813 0.0 0.0 9.0272 9.0272 96.702 0.0 0.0 0.0 44.90183668304488 13.399480616943508 13.399480616943508 15.172407322741307 0 2.173877368056628 1.6989700043360187 0.0 0.0 + + VPAA{I|L}KVV;[VP]AA{I|L}KVV;[PA]A{I|L}VKVV;[PA]A{I|L}KVVV;[VP][VG]VKVV;[VP][VG]KVVV;[PA]AV{I|L}KVV;[PA]VA{I|L}KVV;[VP]K[VG]VVV;[K{I|L}]AVAPVV 9.0272;7.1199;6.8907;6.7352;6.4907;6.3352;6.1644;6.1411;5.5784;4.7368 +;+;-;-;-;-;-;-;-;- + 362 + 1 1.379 72292.3 1.0 6250 5378 11623 HBL1_DMSO_200M_050219_1,11630 HBL1_DMSO_200M_050219_1,11630,VPAALKVV True True VPAALKVV 60.018213 398.767993152142 127858760.0 11623.0 ENST00000468655.1_1_19:49994004-49994437:+|nuORF;;nc|ENSG00000293056|Q6NVV1|RPL13AP3;;ENSG00000142541|ENST00000391857|RPL13A 3.8837948640187583 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11631 60.02 86.0 1158400.0 25 0 122990.0 + 6681 EAYVQKLV 8 105 475.2713527187192 948.5281525042384 2 475.2715331912041 MULTI CID FTMS 0 0 0 11623 957651.125 0.9203652312295996 -2 0.1961708068847656 8 Unmodified _EAYVQKLV_ ENSG00000158246|ENST00000289166|TENT5B;ENSG00000183508|ENST00000369448|TENT5C 63.562846038646086 0.116059504757595 3 {[CP]|[EA]}YVQK{I|L}V 8 0 + 40.271 0.0 0.0 4.2456 4.2456 78.342 0.0 0.0 0.0 6.989700043360188 5.797835966168108 5.797835966168108 5.797835966168108 0 0.5629529932484498 0.0 0.0 0.3494850021680094 + + {[CP]|[EA]}YVQK{I|L}V;{[CP]|[EA]}YVQKV{I|L};{[CP]|[EA]}YV[AG]K{I|L}V;{[CP]|[EA]}YV[AG]KV{I|L};[YV]{[NV]|[RG]}R[W{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RK]{I|L}[W{I|L}] 4.2456;3.6344;3.2691;2.6579;1.5479;0.083392 +;-;-;-;-;- + 296 + 1 1.379 79106.1 1.0 6251 5378 11623 HBL1_DMSO_200M_050219_1,11631 HBL1_DMSO_200M_050219_1,11631,EAYVQKLV True True EAYVQKLV 60.020121 475.271533191204 16288541.0 11623.0 ENSG00000183508|ENST00000369448|TENT5C;;ENSG00000158246|ENST00000289166|TENT5B 5.349003791809082 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11632 60.022 88.0 1183000.0 25 0 149690.0 + 39525 VAVGVIKAV 9 100 428.2866900134061 854.5588270936122 2 428.2865478396416 MULTI CID FTMS 0 0 0 11623 765507.3125 1.0 0 0.0 9 Unmodified _VAVGVIKAV_ ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5 28.486842064014134 0.1687311288560894 3 {[VA]|[{I|L}G]}VR{I|L} 5 5 45.445 0.0 0.0 5.318 0.0 0.0 0.0 313.18829475698743 313.18829475698743 20.83104993179255 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}VR{I|L} 5.318 - 434 + 1 1.379 86922.9 1.0 6252 5378 11623 HBL1_DMSO_200M_050219_1,11632 HBL1_DMSO_200M_050219_1,11632,VAVGVIKAV False True VAVGVIKAV 60.022084 428.286547839642 4003604.75 11623.0 ENST00000436459.2_1_9:135895553-135896258:+|nuORF;;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;;ENSG00000156508|ENST00000309268|EEF1A1;;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;;ENST00000513637.1_1_5:43495177-43495438:-|nuORF 3.784297784169515 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11633 60.024 63.0 716250.0 25 0 112090.0 + 19926 LIATDWCLATV 11 72 402.5463520976226 1204.617226893068 3 402.5465881228447 MULTI CID FTMS 0 0 0 11623 661083.9375 1.0 0 0.0 10 Unmodified _LIATDWCLATV_ REV__ENSG00000110756|ENST00000349215|HPS5;REV__nc|ENSG00000110756|Q9UPZ3-2|HPS5 7.477065608646677 0.839870652676021 3 {I|L}{I|L}A 3 -1 30.942 0.0 0.0 2.5686 0.0 0.0 0.0 904.3890218972272 904.3890218972272 12.98332479720628 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {I|L}{I|L}A 2.5686 + + 45 1 1.379 39698.4 1.0 6253 5378 11623 HBL1_DMSO_200M_050219_1,11633 HBL1_DMSO_200M_050219_1,11633,LIATDWCLATV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11634 60.026 87.0 852350.0 25 0 153820.0 37110 TGVAGHRK 8 107 413.2379010717148 824.4612492102297 2 413.2382690310478 MULTI CID FTMS 0 0 0 11623 660533.4375 0.9914225837408548 11 -0.8839340209960938 11 Unmodified _TGVAGHRK_ ENSG00000130559|ENST00000389532|CAMSAP1;ENST00000483991.5_1_9:138703157-138717996:-|nuORF;nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1 2.302733041254933 0.8103549651115762 3 {I|L} 1 8 11.259 0.0 0.0 1.3656 0.0 0.0 693.3662307549547 0.0 693.3662307549547 0.0 2.9711732690800297 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3656 - 13 + 1 1.379 64686.9 1.0 6254 5378 11623 HBL1_DMSO_200M_050219_1,11634 HBL1_DMSO_200M_050219_1,11634,TGVAGHRK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11635 60.029 159.0 469980.0 25 0 76636.0 + -1 TVMEICTARMC 11 86 657.7898486022981 1313.565144271396 2 657.7909423708916 MULTI CID FTMS 0 0 0 11623 574183.3125 0.2962705244700534 2 -0.2165336608886718 12 Carbamidomethyl (C) _TVMEIC(Carbamidomethyl (C))TARMC_ REV__ENST00000496688.1_1_9:123589031-123593637:-|nuORF 22.65808497894818 0.560183898709508 3 {[TV]|[{I|L}S]}MEESD[YN]KV 11 -1 + 69.786 0.0 0.0 5.3127 5.3127 89.974 0.0 0.0 0.0 56.40890261098497 0.0884222672891326 0.0884222672891326 69.78579202207439 0 1.1861818737241734 2.0 0.8494850021680094 0.0 {[TV]|[{I|L}S]}MEESD[YN]KV 5.3127 - 141 + 1 1.379 61704.4 1.0 6255 5378 11623 HBL1_DMSO_200M_050219_1,11635 HBL1_DMSO_200M_050219_1,11635,TVMEICTARMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11636 60.031 96.0 713180.0 25 0 83944.0 + 17736 KPYAHILSV 9 88 514.300992705903 1026.587432478606 2 514.3008300662041 MULTI CID FTMS 0 0 0 11623 532136.625 1.0 0 0.0 13 Unmodified _KPYAHILSV_ ENSG00000158161|ENST00000373871|EYA3;ENST00000471498.5_1_1:28324859-28384546:-|nuORF;nc|ENSG00000158161|Q99504-3|EYA3;nc|ENSG00000158161|Q99504-4|EYA3;nc|ENSG00000158161|Q99504-5|EYA3 65.23502041540118 0.0231836506122253 3 {[TV]|[{I|L}S]}[HM]K{I|L}{I|L}SV 9 5 + 77.457 0.0 0.0 7.5451 7.5451 93.343 0.0 0.0 0.0 13.748162098248995 66.34820009305471 13.748162098248995 10.31234684152075 0 1.1237125054200234 1.3010299956639813 1.305462187404089 0.7302046884880937 {[TV]|[{I|L}S]}[HM]K{I|L}{I|L}SV;{[TV]|[{I|L}S]}[HM]{I|L}K{I|L}SV;[QP]{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}{I|L}SV;{[MS]|[{M(Oxidation (M))|F}A]}[Q{I|L}]H{I|L}{I|L}SV;{[WN]|[YH]}[PA]K{I|L}{I|L}SV;{[TV]|[{I|L}S]}[HM]{I|L}{I|L}KSV;{[{M(Oxidation (M))|F}H]|[RQ]}[QT][VP]{I|L}SV;[QP]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}K{I|L}SV;{[WN]|[YH]}[PA]{I|L}K{I|L}SV;[KP][C(Carbamidomethyl (C))K][VP]{I|L}SV 7.5451;6.5406;5.5785;5.356;5.1832;5.0781;4.7123;4.574;4.5191;3.5723 -;-;-;-;-;-;-;-;-;- 249 1 1.379 60868.4 1.0 6256 5378 11623 HBL1_DMSO_200M_050219_1,11636 HBL1_DMSO_200M_050219_1,11636,KPYAHILSV True True KPYAHILSV 60.030801 514.300830066204 4003747.5 11623.0 ENSG00000158161|ENST00000373871|EYA3;;nc|ENSG00000158161|Q99504-5|EYA3;;ENST00000471498.5_1_1:28324859-28384546:-|nuORF;;nc|ENSG00000158161|Q99504-3|EYA3;;nc|ENSG00000158161|Q99504-4|EYA3 5.582069079081218 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11637 60.033 93.0 648270.0 25 0 47171.0 + 44651 YPFKPPKV 8 92 488.2869567505858 974.5593605679716 2 488.2863647341728 MULTI CID FTMS 0 0 0 11623 448822.15625 0.0132262015637855 13 -1.1073112487792969 14 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 18.13498045792455 0.6430038125133779 3 YP{I|L}{I|L}T 5 6 49.17 0.0 0.0 5.0454 0.0 0.0 0.0 384.20017419986567 384.20017419986567 31.850781693192967 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 YP{I|L}{I|L}T 5.0454 - 217 + 1 1.379 50903.6 1.0 6257 5378 11623 HBL1_DMSO_200M_050219_1,11637 HBL1_DMSO_200M_050219_1,11637,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11638 60.035 108.0 447570.0 25 0 55231.0 + 2810 ATVRFNENL 9 90 532.2806597495558 1062.5467665659114 2 532.2795287966728 MULTI CID FTMS 0 0 0 11623 442937.1875 1.0 0 0.0 15 Unmodified _ATVRFNENL_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 26.268140514670165 0.1969607489560049 3 EN{I|L} 3 6 29.327 0.0 0.0 2.7601 0.0 0.0 688.361752621471 0.0 688.361752621471 0.0 7.711892990699383 0.0 0.0 0 0.6139829889124311 0.0 0.0 0.0 + EN{I|L} 2.7601 + + 165 1 1.379 45219.8 1.0 6258 5378 11623 HBL1_DMSO_200M_050219_1,11638 HBL1_DMSO_200M_050219_1,11638,ATVRFNENL False True ATVRFNENL 60.035138 532.279528796673 4311537.5 11623.0 ENST00000524933.1_1_11:13716477-13732426:+|nuORF;;ENSG00000197601|ENST00000354817|FAR1 0.1222138007481892 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11639 60.039 195.0 497910.0 25 0 35440.0 + 31490 RPYEPINSI 9 118 544.7898601847899 1087.5651674363796 2 544.7900878787041 MULTI CID FTMS 0 0 0 11623 403085.0 0.440982423089478 -2 0.1961708068847656 16 Unmodified _RPYEPINSI_ ENSG00000115207|ENST00000264720|GTF3C2 93.16586880292088 0.0136995152735431 3 [NS]{I|L}[KC]P{I|L}NS{I|L} 10 5 + 93.319 0.0 0.0 8.5805 8.5805 91.682 0.0 0.0 0.0 7.067968163113534 16.53212513775344 7.067968163113534 7.067968163113534 0 1.5356668758921828 1.0969100130080565 1.360924374808178 0.7977785331600469 [NS]{I|L}[KC]P{I|L}NS{I|L};{[TV]|[{I|L}S]}N[KC]P{I|L}NS{I|L};[NS]{I|L}[KC]P{I|L}GGS{I|L};[RP]YEP{I|L}NS{I|L};{I|L}{I|L}[CS]EP{I|L}NS{I|L};{[TV]|[{I|L}S]}N[KC]P{I|L}GGS{I|L};{[TV]|[{I|L}S]}GG[KC]P{I|L}NS{I|L};[RP]YEP{I|L}GGS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S[KC]P{I|L}NS{I|L};{I|L}{I|L}[CS]EP{I|L}GGS{I|L} 8.5805;7.9306;7.7379;7.5924;7.3725;7.088;6.8225;6.7457;6.6345;6.2085 -;-;-;+;-;-;-;-;-;- + 967 1 1.379 82138.5 1.0 6259 5378 11623 HBL1_DMSO_200M_050219_1,11639 HBL1_DMSO_200M_050219_1,11639,RPYEPINSI True True RPYEPINSI 60.03889 544.790087878704 5594393.5 11623.0 ENSG00000115207|ENST00000264720|GTF3C2 6.723784287770589 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11640 60.041 78.0 478670.0 25 0 31379.0 21636 LPLCMHLSV 9 78 506.7698456993849 1011.52513846557 2 506.7689086794853 MULTI CID FTMS 0 0 0 11623 399762.84375 1.0 0 0.0 17 Unmodified _LPLCMHLSV_ ENST00000573130.2_1_16:3104061-3104997:-|nuORF;ENST00000573130.2_1_16:3104061-3104997:-|nuORF;ENST00000573130.2_1_16:3104061-3104997:-|nuORF 13.50788311687929 0.4710407108020397 3 {[VA]|[{I|L}G]}EPEAQ[R{I|L}] 9 8 + 26.748 0.0 0.0 2.6443 2.6443 70.925 0.0 0.0 0.0 3.010299956639809 5.642492736872601 3.010299956639809 3.010299956639809 0 0.218765315847925 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}EPEAQ[R{I|L}];{NN|[MP]|[D{I|L}]|[EV]}APEAQ[R{I|L}];{[VA]|[{I|L}G]}EPEA[AG][R{I|L}];{NN|[MP]|[D{I|L}]|[EV]}APEA[AG][R{I|L}];[EP]E{[VA]|[{I|L}G]}AQ[R{I|L}];[EP]E[Q{I|L}]Q[R{I|L}];[EP]E{[VA]|[{I|L}G]}A[AG][R{I|L}] 2.6443;2.3467;1.734;1.4364;1.2201;0.57968;0.30979 -;-;-;-;-;-;- 99 1 1.379 34880.6 1.0 6260 5378 11623 HBL1_DMSO_200M_050219_1,11640 HBL1_DMSO_200M_050219_1,11640,LPLCMHLSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11641 60.043 91.0 401500.0 25 0 67452.0 5510 DLVKGGHW 8 82 456.2400613218112 910.4655697104224 2 456.2401916384697 MULTI CID FTMS 0 0 0 11623 365976.8125 0.3788037710959068 2 -0.2165336608886718 18 Unmodified _DLVKGGHW_ ENSG00000103528|ENST00000355377|SYT17 13.50788311687929 0.7113601687236069 3 S{I|L} 2 7 14.693 0.0 0.0 1.6138 0.0 0.0 692.3391181496787 0.0 692.3391181496787 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 S{I|L} 1.6138 - 72 + 1 1.379 33117.6 1.0 6261 5378 11623 HBL1_DMSO_200M_050219_1,11641 HBL1_DMSO_200M_050219_1,11641,DLVKGGHW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11642 60.045 93.0 373060.0 25 0 35882.0 + 39018 TVSSPGPVSI 10 73 472.2584030684525 942.5022532037052 2 472.2585021853447 MULTI CID FTMS 0 0 0 11623 342244.6875 0.4259335817984461 -2 0.1961708068847656 19 Unmodified _TVSSPGPVSI_ REV__ENSG00000119698|ENST00000304338|PPP4R4 13.90604991867851 0.6142120002215601 3 G{I|L} 2 -1 17.959 0.0 0.0 1.9054 0.0 0.0 754.385963996477 0.0 754.385963996477 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L} 1.9054 - 36 + 1 1.379 32852.2 1.0 6262 5378 11623 HBL1_DMSO_200M_050219_1,11642 HBL1_DMSO_200M_050219_1,11642,TVSSPGPVSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11643 60.054 552.0 153010.0 25 0 19256.0 + 14705 IIYDRDFSYN 10 92 653.3092415151638 1304.6039300971274 2 653.3090087771416 MULTI CID FTMS 0 0 0 11623 306661.0 1.0 0 0.0 20 Unmodified _IIYDRDFSYN_ ENSG00000167325|ENST00000300738|RRM1 75.5705956163825 0.0187571863157879 3 {I|L}{I|L}YD{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}YN 10 3 + 95.609 0.0 0.0 7.3286 7.3286 96.332 0.0 0.0 0.0 34.14651886415513 12.659389507179355 12.659389507179355 95.60911268361151 0 1.5682503180159344 2.0 0.3807196863200844 1.548455006504028 {I|L}{I|L}YD{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}YN 7.3286 - 133 + 1 1.379 72097.8 1.0 6263 5378 11623 HBL1_DMSO_200M_050219_1,11643 HBL1_DMSO_200M_050219_1,11643,IIYDRDFSYN True True IIYDRDFSYN 60.054407 653.309008777142 1785763.625 11623.0 ENSG00000167325|ENST00000300738|RRM1 6.449374834696452 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11645 60.07 762.0 257170.0 25 0 27455.0 + 989 AFSVRSSL 8 175 433.7389801534608 865.4634073737217 2 433.7394592165947 MULTI CID FTMS 0 0 0 11644 232910.984375 0.7787819817357238 1 -0.1683120727539062 1 Unmodified _AFSVRSSL_ ENSG00000167555|ENST00000360465|ZNF528;ENSG00000170949|ENST00000683776|ZNF160;ENSG00000170949|ENST00000683776|ZNF160;ENSG00000170949|ENST00000683776|ZNF160;ENSG00000197497|ENST00000396424|ZNF665;ENSG00000197497|ENST00000396424|ZNF665;ENSG00000197937|ENST00000334197|ZNF347;ENST00000598479.1_1_19:52918345-52919989:+|nuORF;nc|ENSG00000167555|Q3MIS6-2|ZNF528;nc|ENSG00000197937|Q96SE7-2|ZNF347 48.345845343767074 0.1470278396477103 3 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}TKDA 7 6 43.9 0.0 0.0 5.0725 0.0 0.0 0.0 116.05098901920157 116.05098901920157 29.00592295029035 0.0 0.0 0.0 0 0.8807196863200843 0.0 1.336696871556164 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}TKDA 5.0725 - 448 + 1 1.379 153655.6 1.0 6264 5379 11644 HBL1_DMSO_200M_050219_1,11645 HBL1_DMSO_200M_050219_1,11645,AFSVRSSL False True AFSVRSSL 60.069963 433.739459216595 3013863.75 11644.0 nc|ENSG00000167555|Q3MIS6-2|ZNF528;;ENSG00000197937|ENST00000334197|ZNF347;;nc|ENSG00000197937|Q96SE7-2|ZNF347;;ENST00000598479.1_1_19:52918345-52919989:+|nuORF;;ENSG00000170949|ENST00000683776|ZNF160;;ENSG00000197497|ENST00000396424|ZNF665;;ENSG00000167555|ENST00000360465|ZNF528 0.4512486855189005 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11646 60.072 119.0 528010.0 25 0 58543.0 + 17738 KPYDGITTI 9 100 504.2745874467169 1006.5346219602338 2 504.2741271853447 MULTI CID FTMS 0 0 0 11644 411625.03125 0.8367229758572535 -1 0.0482215881347656 2 Unmodified _KPYDGITTI_ ENSG00000141027|ENST00000268712|NCOR1;nc|ENSG00000141027|O75376-2|NCOR1 34.93206674587334 0.1032771302489716 3 G{I|L}TT{I|L} 5 4 51.696 0.0 0.0 5.136 0.0 0.0 503.2403431623063 0.0 503.2403431623063 0.0 39.69605629211124 0.0 0.0 0 1.25 0.0 0.4247425010840047 0.0 + G{I|L}TT{I|L} 5.136 + + 817 1 1.379 56637.1 1.0 6265 5379 11644 HBL1_DMSO_200M_050219_1,11646 HBL1_DMSO_200M_050219_1,11646,KPYDGITTI True True KPYDGITTI 60.072431 504.274127185345 4542147.0 11644.0 ENSG00000141027|ENST00000268712|NCOR1;;nc|ENSG00000141027|O75376-2|NCOR1 2.5389243761698403 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11647 60.085 722.0 225500.0 25 0 40305.0 -1 0 90 1131.1170576193244 3390.3293434581738 3 1131.784350574017 MULTI CID FTMS 0 0 0 11644 406450.25 1.0 0 0.0 3 3 WAN 3 -1 11.159 0.0 0.0 0.32913 0.0 0.0 2002.686666529628 1013.4989348871768 3016.1856014168047 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 WAN 0.32913 - 72 + 1 1.379 131574.4 1.0 6266 5379 11644 HBL1_DMSO_200M_050219_1,11647 HBL1_DMSO_200M_050219_1,11647, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11648 60.099 800.0 149090.0 25 0 30188.0 + -1 MPYSGMTGAQV 11 74 1141.1016277572994 3420.283053872098 3 1141.433764636517 MULTI CID FTMS 0 0 0 11644 293516.59375 1.0 0 0.0 4 ENSG00000111816|ENST00000606080|FRK;nc|ENSG00000111816|P42685-2|FRK 3 VQAGTM 6 -1 33.18 0.0 0.0 0.97011 0.0 0.0 2297.8131373272827 532.1875094049436 2830.0006467322264 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0044321917401078 0.0 VQAGTM 0.97011 - 749 + 1 1.379 97471.4 0.8999999761581421 6267 5379 11644 HBL1_DMSO_200M_050219_1,11648 HBL1_DMSO_200M_050219_1,11648, False False MPYSGMTGAQV 60.098865 1141.0998 131081.203125 11644.0 ENSG00000111816|ENST00000606080|FRK;;nc|ENSG00000111816|P42685-2|FRK 2.5302229871352515 1.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11649 60.105 311.0 665550.0 25 0 41815.0 + + 38803 AQYPSEHLI 9 192 528.7650003130727 1055.5154476929454 2 529.2684203982353 MULTI CID FTMS 0 0 0 11644 246797.0 0.4181505908958589 -1 0.0482215881347656 5 Unmodified _TVFCLAQFQ_ nc|ENSG00000010322|Q9Y2I1-2|NISCH;ENSG00000010322|ENST00000345716|NISCH;ENST00000489895.5_1_3:52514938-52524786:+|nuORF 14.838274106304384 0.4350285940865338 3 S{[QN]|[E{I|L}]|[KN]}{I|L}HNC{I|L}Q 9 -1 + 29.573 0.0 0.0 2.8018 2.8018 72.826 0.0 0.0 0.0 3.865779332289133 3.865779332289133 3.865779332289133 3.865779332289133 0 0.0 0.0 0.0 0.5451140161145328 S{[QN]|[E{I|L}]|[KN]}{I|L}HNC{I|L}Q;[EP]SH{I|L}VE[{M(Oxidation (M))|F}V];[TP]YPSE[H{I|L}]{I|L};[TP]DH{I|L}VE[{M(Oxidation (M))|F}V];[EP]SH{I|L}{I|L}D[{M(Oxidation (M))|F}V];S{[QN]|[E{I|L}]|[KN]}Y{I|L}{[RE]|[WV]}{M(Oxidation (M))|F};{[YC]|[HE]}SP{I|L}VE[{M(Oxidation (M))|F}V];[TP]DH{I|L}{I|L}D[{M(Oxidation (M))|F}V];S{[QN]|[E{I|L}]|[KN]}{I|L}HGGC{I|L}Q;S{[QN]|[E{I|L}]|[KN]}{I|L}HNCQ{I|L} 2.8018;2.4355;2.3889;2.2813;2.1503;2.0822;2.0004;1.9961;1.9294;1.917 -;-;-;-;-;-;-;-;-;- 2177 + 1 1.379 163137.5 1.0 6268 5379 11644 HBL1_DMSO_200M_050219_1,11649 HBL1_DMSO_200M_050219_1,11649,TVFCLAQFQ False False AQYPSEHLI 60.104544 529.268420398235 3537393.5 11644.0 nc|ENSG00000010322|Q9Y2I1-2|NISCH;;ENSG00000010322|ENST00000345716|NISCH;;ENST00000489895.5_1_3:52514938-52524786:+|nuORF 5.401882171630859 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11650 60.11 292.0 581860.0 25 0 58967.0 + 17761 KQFEGTVEI 9 160 525.7768032503222 1049.5390535674444 2 525.7774536013603 MULTI CID FTMS 0 0 0 11644 225516.46875 0.0590369341335329 -1 0.0482215881347656 6 Unmodified _KQFEGTVEI_ ENSG00000139618|ENST00000380152|BRCA2 75.76082778847304 0.0188720312721366 3 [AG]K{M(Oxidation (M))|F}EGTVE{I|L} 10 3 + 75.977 0.0 0.0 7.2391 7.2391 80.592 0.0 0.0 0.0 0.6888128940781257 16.53212513775344 0.6888128940781257 0.6888128940781257 0 0.7742275032520141 0.7958800173440752 1.6989700043360187 0.8494850021680094 [AG]K{M(Oxidation (M))|F}EGTVE{I|L};[KQ]{M(Oxidation (M))|F}EGTVE{I|L};[AG]K{M(Oxidation (M))|F}EGS{I|L}E{I|L};[KQ]{M(Oxidation (M))|F}EGS{I|L}E{I|L};{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}E]TVE{I|L};[AG]K{M(Oxidation (M))|F}EKEE{I|L};[KQ]{M(Oxidation (M))|F}EKEE{I|L};[{M(Oxidation (M))|F}E][KQ]GTVE{I|L};{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}E]S{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[SG]{M(Oxidation (M))|F}[KQ]E{I|L} 7.2391;7.1735;6.3835;6.3179;5.9068;5.6219;5.5614;5.0539;5.0513;4.714 -;+;-;-;-;-;-;-;-;- + 2938 1 1.379 138810.3 1.0 6269 5379 11644 HBL1_DMSO_200M_050219_1,11650 HBL1_DMSO_200M_050219_1,11650,KQFEGTVEI True True KQFEGTVEI 60.109902 525.77745360136 58016992.0 11644.0 ENSG00000139618|ENST00000380152|BRCA2 4.237342834472656 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11651 60.124 800.0 177060.0 25 0 23800.0 -1 0 96 1136.108498647413 3405.303666542439 3 1136.780078113079 MULTI CID FTMS 0 0 0 11644 184361.515625 0.8119542305083701 -2 0.1779899597167968 7 3 TAT 3 -1 13.404 0.0 0.0 0.39362 0.0 0.0 2620.8688653723207 508.2769869440063 3129.145852316327 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 TAT 0.39362 - 190 + 1 1.379 111362.7 0.7099999785423279 6270 5379 11644 HBL1_DMSO_200M_050219_1,11651 HBL1_DMSO_200M_050219_1,11651, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11652 60.139 800.0 262750.0 25 0 17717.0 + 44726 YPIEIDPHRTV 11 157 670.3535309652957 0 670.3538085818291 PEAK CID FTMS 0 0 0 11644 172041.1875 0.2973719348963228 3 -0.3296928405761719 8 Unmodified _YPIEIDPHRTV_ ENSG00000141698|ENST00000435506|NT5C3B;ENST00000393910.5_1_17:39983688-39992209:-|nuORF;ENST00000469698.5_1_17:39981777-39991902:-|nuORF;nc|ENSG00000141698|Q969T7-2|NT5C3B 53.4695610476455 0.0320494009899985 3 P{I|L}E{I|L}DPT 7 4 58.285 0.0 0.0 4.3539 0.0 0.0 163.06247557059106 407.2297152154906 570.2921907860817 0.0 0.0 0.0 0.0 0 1.805462187404089 0.0 1.0 0.0 P{I|L}E{I|L}DPT 4.3539 - 2714 + 1 1.379 152810.5 0.8799999952316284 6271 5379 11644 HBL1_DMSO_200M_050219_1,11652 HBL1_DMSO_200M_050219_1,11652,YPIEIDPHRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11653 60.153 800.0 139990.0 25 0 24018.0 -1 0 73 848.8369280863997 3391.3186064791985 4 849.3386718630791 MULTI CID FTMS 0 0 0 11644 158428.515625 0.8333063493326268 -1 0.0482215881347656 9 3 S 1 -1 6.5714 0.0 0.0 0.19377 0.0 0.0 2780.0269937856424 521.2357882135374 3301.26278199918 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 S 0.19377 - 23 + 1 1.379 96917.3 0.7699999809265137 6272 5379 11644 HBL1_DMSO_200M_050219_1,11653 HBL1_DMSO_200M_050219_1,11653, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11654 60.166 800.0 192140.0 25 0 12664.0 + -1 YLYMWNWGLS 10 162 450.2052285748563 1347.593856324769 3 450.2060729861259 MULTI CID FTMS 0 0 0 11644 153606.640625 0.6572967286553112 1 -0.1683120727539062 10 Oxidation (M) _YLYM(Oxidation (M))WNWGLS_ REV__ENSG00000121940|ENST00000369969|CLCC1;REV__ENST00000482889.1_1_1:109472820-109486481:-|nuORF;REV__nc|ENSG00000121940|Q96S66-2|CLCC1 5.783430956126388 0.6998847395148697 3 [{I|L}P]PPPP 6 -1 28.416 0.0 0.0 2.1087 0.0 0.0 0.0 746.2235942963815 746.2235942963815 6.631193046435673 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P]PPPP 2.1087 - 575 1 1.379 124114.1 0.6899999976158142 6273 5379 11644 HBL1_DMSO_200M_050219_1,11654 HBL1_DMSO_200M_050219_1,11654,YLYMWNWGLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11655 60.181 800.0 152630.0 25 0 13087.0 + 8223 EPYGKIKNYI 10 126 612.8345251683319 1223.6544974034637 2 612.8347045779228 MULTI CID FTMS 0 0 0 11644 130228.8203125 0.5669625632290558 -1 0.0482215881347656 11 Unmodified _EPYGKIKNYI_ ENSG00000015479|ENST00000394805|MATR3;ENST00000415279.1_1_1:106435599-106436040:+|nuORF;ENST00000502422.5_1_5:138651717-138665081:+|nuORF;nc|ENSG00000280987|P43243-2|MATR3 78.7280429016045 0.0181102348768482 3 EPYGK{I|L}KNY{I|L} 10 0 + 60.14 0.0 0.0 4.9148 4.9148 84.845 0.0 0.0 0.0 11.33152719846376 9.449911167586473 9.449911167586473 9.449911167586473 0 0.6109243748081782 1.3979400086720375 0.0 0.4802046884880938 + + EPYGK{I|L}KNY{I|L};EPYGK{I|L}KN{I|L}Y;[EP]{[DS]|[MA]|[CV]|TT}K{I|L}PQ[TP]{I|L};EPYGK{I|L}KGGY{I|L};EPYGK{I|L}KGG{I|L}Y;[VP][EC]K{I|L}PQ[TP]{I|L};EP{[TV]|[{I|L}S]}KGE[HK]S{I|L};{[DA]|[EG]}{[QG]|[NA]}GK{I|L}PQ[TP]{I|L};[VP]{M(Oxidation (M))|F}{[NV]|[RG]}{I|L}PQ[TP]{I|L};E[KT]V{[ET]|[MV]}KNY{I|L} 4.9148;4.1425;3.9887;3.9777;3.2054;3.0539;2.7155;2.5475;2.296;2.223 +;-;-;-;-;-;-;-;-;- + 2654 + 1 1.379 97345.3 0.8299999833106995 6274 5379 11644 HBL1_DMSO_200M_050219_1,11655 HBL1_DMSO_200M_050219_1,11655,EPYGKIKNYI True True EPYGKIKNYI 60.181464 612.834704577923 2103673.0 11644.0 ENST00000502422.5_1_5:138651717-138665081:+|nuORF;;ENSG00000015479|ENST00000394805|MATR3;;nc|ENSG00000280987|P43243-2|MATR3;;ENST00000415279.1_1_1:106435599-106436040:+|nuORF 5.310054461161296 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11656 60.195 800.0 146630.0 25 0 7915.7 + 23731 LTVSGEQADRV 11 172 587.8060407313957 1173.5975285295913 2 588.3080322146416 MULTI CID FTMS 0 0 0 11644 129857.3984375 0.6614522356725482 1 -0.1683120727539062 12 Unmodified _LTVSGEQADRV_ REV__ENSG00000164010|ENST00000372517|ERMAP 24.99096001346401 0.505407273373304 3 {[TV]|[{I|L}S]}AS{I|L}T[WC(Carbamidomethyl (C))]Q 9 -1 28.927 0.0 0.0 2.4648 0.0 0.0 0.0 124.07321147320376 124.07321147320376 11.57866559272211 0.0 0.0 0.0 0 0.0 0.744727494896694 1.7376954943324543 0.0 {[TV]|[{I|L}S]}AS{I|L}T[WC(Carbamidomethyl (C))]Q 2.4648 - 2114 1 1.379 91299.9 0.8199999928474426 6275 5379 11644 HBL1_DMSO_200M_050219_1,11656 HBL1_DMSO_200M_050219_1,11656,LTVSGEQADRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11657 60.209 800.0 80287.0 25 0 25308.0 -1 0 35 1191.1540891332138 3570.4404379998414 3 1191.488574206829 MULTI CID FTMS 0 0 0 11644 124617.015625 0.8120156903374836 -1 0.0482215881347656 13 3 E 1 -1 6.9897 0.0 0.0 0.19577 0.0 0.0 2914.2124849742545 524.1634615533811 3438.375946527636 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19577 - 3 + 1 1.379 64263.3 0.5 6276 5379 11644 HBL1_DMSO_200M_050219_1,11657 HBL1_DMSO_200M_050219_1,11657, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11658 60.215 243.0 542650.0 25 0 47293.0 + 34696 SPTKLPSI 8 161 421.7516447479731 841.4887365627462 2 421.7501403689384 MULTI CID FTMS 0 0 0 11644 121403.9453125 0.2562791057120914 -1 0.0482215881347656 14 Unmodified _SPTKLPSI_ ENSG00000104320|ENST00000265433|NBN 56.17704186161178 0.1143274477948619 3 SP[KT]{I|L}PS{I|L} 8 0 + 50.248 0.0 0.0 5.9714 5.9714 86.206 0.0 0.0 0.0 28.28343917747816 8.210954385991805 8.210954385991805 8.210954385991805 0 1.024227503252014 1.5228787452803376 0.4634679910804404 0.0 + + SP[KT]{I|L}PS{I|L};SP[KT]{I|L}P{I|L}S;SP[KT]{I|L}PTV;SP[KT][VP]T{I|L} 5.9714;4.9956;4.9525;3.2995 +;-;-;- + 106 + 1 1.379 104038.6 1.0 6277 5379 11644 HBL1_DMSO_200M_050219_1,11658 HBL1_DMSO_200M_050219_1,11658,SPTKLPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11659 60.223 445.0 350500.0 25 0 29989.0 + -1 NFLNMSRSM 9 159 558.2518515539828 1114.4891501747654 2 558.2515136599541 MULTI CID FTMS 0 0 0 11644 100257.53125 0.2920306117572632 -1 0.0482215881347656 15 Oxidation (M) _NFLNMSRSM(Oxidation (M))_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 66.45667989310934 0.0225072657982126 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}SMN{I|L}SR 9 -1 + 55.445 0.0 0.0 4.975 4.975 79.432 0.0 0.0 0.0 1.8223330692836512 1.8223330692836512 1.8223330692836512 4.678202227106276 0 0.6822333069283655 0.0 0.7302046884880937 0.9436726795685342 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}SMN{I|L}SR;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}NMSRS{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}GMN{I|L}C(Carbamidomethyl (C)){M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}SMGG{I|L}SR;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}GMC(Carbamidomethyl (C)){I|L}N{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}GGMSRS{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}GMGG{I|L}C(Carbamidomethyl (C)){M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}GMGC{I|L}N{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}GM[YQ]SR;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}GMN{I|L}C(Carbamidomethyl (C)){M(Oxidation (M))|F} 4.975;4.5552;4.4205;4.1487;3.9814;3.729;3.5943;3.5082;3.4023;3.0871 -;+;-;-;-;-;-;-;-;- + 1172 1 1.379 119647.7 1.0 6278 5379 11644 HBL1_DMSO_200M_050219_1,11659 HBL1_DMSO_200M_050219_1,11659,NFLNMSRSM False False NFLNMSRSM 60.222781 558.251513659954 2016461.25 11644.0 ENSG00000137959|ENST00000370751|IFI44L;;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 5.422029972076416 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11661 60.228 43.0 2881200.0 25 0 718960.0 -1 0 50 1123.4611095958624 3367.361499387788 3 1123.796069324017 MULTI CID FTMS 0 0 0 11660 5721336.0 0.7184959263447414 2 -0.1613807678222656 1 3 E 1 -1 6.9897 0.0 0.0 0.20757 0.0 0.0 2711.135059432894 524.1621187799436 3235.2971782128384 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20757 - 10 + 1 1.37 109635.4 1.0 6279 5380 11660 HBL1_DMSO_200M_050219_1,11661 HBL1_DMSO_200M_050219_1,11661, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11662 60.229 36.0 1757100.0 25 0 241020.0 + -1 EPSLICSC 8 84 483.2065771547889 964.398601376378 2 483.2071716189384 MULTI CID FTMS 0 0 0 11660 2486854.75 0.5667518629323887 2 -0.1613807678222656 2 2 Carbamidomethyl (C) _EPSLIC(Carbamidomethyl (C))SC(Carbamidomethyl (C))_ REV__ENST00000367409.8_1_1:197061115-197062200:-|nuORF 19.438996006549623 0.6237395211498085 3 [EP]S{I|L}G 5 -1 34.666 0.0 0.0 3.5945 0.0 0.0 0.0 478.15092616569353 478.15092616569353 0.8927186071611715 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.8494850021680094 0.0 [EP]S{I|L}G 3.5945 - 115 1 1.37 52266.0 1.0 6280 5380 11660 HBL1_DMSO_200M_050219_1,11662 HBL1_DMSO_200M_050219_1,11662,EPSLICSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11663 60.23 16.0 4274300.0 25 0 681870.0 + 42047 VQVDGKIGL 9 78 464.7766159157363 927.5386788982726 2 464.7767822146416 MULTI CID FTMS 0 0 0 11660 4672600.0 1.0 0 0.0 3 Unmodified _VQVDGKIGL_ ENSG00000137409|ENST00000373627|MTCH1;nc|ENSG00000137409|Q9NZJ7-2|MTCH1 36.12702656103203 0.0967173616627612 3 {[QV]|[N{I|L}]|[RA]|[KV]}VSVG[Q{I|L}]V 9 5 + 62.4 0.0 0.0 6.7274 6.7274 91.09 0.0 0.0 0.0 13.70506544868192 18.94402179365485 13.70506544868192 10.185690803236298 0 1.0 1.2218487496163564 0.7059771852360797 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}VSVG[Q{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}[TA]{I|L}G[Q{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}VSGV[Q{I|L}]V;[KG]DV{I|L}G[Q{I|L}]V;[KG]D{I|L}VG[Q{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}[TA]AV[Q{I|L}]V;[KG]DVAV[Q{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}[WR][Q{I|L}]V;[KG]D{I|L}GV[Q{I|L}]V;[KA]VDVG[Q{I|L}]V 6.7274;5.6293;5.478;4.9555;4.5712;4.3799;3.7061;3.4189;3.3218;3.2544 -;-;-;-;-;-;-;-;-;- 569 1 1.37 57538.9 1.0 6281 5380 11660 HBL1_DMSO_200M_050219_1,11663 HBL1_DMSO_200M_050219_1,11663,VQVDGKIGL True True VQVDGKIGL 60.230035 464.776782214642 21093996.0 11660.0 nc|ENSG00000137409|Q9NZJ7-2|MTCH1;;ENSG00000137409|ENST00000373627|MTCH1 2.7020896673202515 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11664 60.231 37.0 1787500.0 25 0 297150.0 -1 VNFCFHCYCFC 11 69 778.782551017107 1555.550549101014 2 778.7835571169853 MULTI CID FTMS 0 0 0 11660 1948684.5 1.0 0 0.0 4 3 Carbamidomethyl (C) _VNFC(Carbamidomethyl (C))FHC(Carbamidomethyl (C))YC(Carbamidomethyl (C))FC_ L1PA14_dup722|chr4:35336-35828:-|1.1683807787415716|0.0538723938996896|4.44|40.0|28|2|anti-sense 0.3506318815782774 0.8734936314171269 3 YESGMY{M(Oxidation (M))|F}V{[QG]|[NA]} 10 -1 41.203 0.0 0.0 2.6488 0.0 0.0 376.08894545722814 0.0 376.08894545722814 0.0 26.51023442440469 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 YESGMY{M(Oxidation (M))|F}V{[QG]|[NA]} 2.6488 - 313 1 1.37 52761.6 1.0 6282 5380 11660 HBL1_DMSO_200M_050219_1,11664 HBL1_DMSO_200M_050219_1,11664,VNFCFHCYCFC False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 11665 60.233 61.0 1026600.0 25 0 200420.0 + 40116 VGLGHNAR 8 95 412.2303899297853 822.4462269263706 2 412.2302429080009 MULTI CID FTMS 0 0 0 11660 1210689.875 0.4535671838195007 -7 0.7455291748046875 5 Unmodified _VGLGHNAR_ REV__ENST00000533444.1_1_8:145150552-145150603:+|nuORF 0.7936320650641473 0.8195151834710337 3 S 1 -1 8.6759 0.0 0.0 1.0549 0.0 0.0 717.4015701043965 0.0 717.4015701043965 0.0 8.675910884952316 0.0 0.0 0 0.0 0.0 0.0 0.0 S 1.0549 - 3 + 1 1.37 54288.9 1.0 6283 5380 11660 HBL1_DMSO_200M_050219_1,11665 HBL1_DMSO_200M_050219_1,11665,VGLGHNAR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11666 60.235 90.0 1059400.0 25 0 147740.0 + 41428 VPLGLAAEL 9 102 441.7680744852922 881.5215960373844 2 441.7682983279228 MULTI CID FTMS 0 0 0 11660 1034339.0 0.5526154647557638 -12 1.2311668395996094 6 Unmodified _VPLGLAAEL_ REV__ENSG00000100593|ENST00000342219|ISM2;REV__nc|ENSG00000100593|Q6H9L7-2|ISM2;REV__nc|ENSG00000100593|Q6H9L7-3|ISM2;REV__nc|ENSG00000100593|Q6H9L7-4|ISM2;REV__nc|ENSG00000100593|Q6H9L7-5|ISM2 44.40701690623563 0.0526327925666318 3 VP{I|L}{I|L}{M(Oxidation (M))|F}SPG 8 -1 73.665 0.0 0.0 8.3566 0.0 0.0 0.0 68.05126367740468 68.05126367740468 53.97222222092239 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8807196863200843 0.0 VP{I|L}{I|L}{M(Oxidation (M))|F}SPG 8.3566 - 528 + 1 1.37 78909.8 1.0 6284 5380 11660 HBL1_DMSO_200M_050219_1,11666 HBL1_DMSO_200M_050219_1,11666,VPLGLAAEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11667 60.236 74.0 1078600.0 25 0 65428.0 + 23121 LSPFPSQVQ 9 106 501.76605667706673 1001.5175604209336 2 501.7661010622978 MULTI CID FTMS 0 0 0 11660 998920.8125 0.7562569562086644 2 -0.1613807678222656 7 Unmodified _LSPFPSQVQ_ REV__ENSG00000135898|ENST00000650999|GPR55 62.57269311338072 0.0246576765497938 3 [AG]VSQVSQ{[QV]|[N{I|L}]|[RA]|[KV]} 10 -1 + 51.894 0.0 0.0 5.1815 5.1815 73.142 0.0 0.0 0.0 0.1926645698125142 5.227810381611157 0.1926645698125142 0.1926645698125142 0 0.7742275032520141 2.0 1.2302046884880935 0.0 [AG]VSQVSQ{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}PYPAQ{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}PAQ{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}PAQ{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VQSVSQ{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VSQVS[AG]{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VS[AG]VSQ{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}PYPA[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}PA[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}PA[AG]{[QV]|[N{I|L}]|[RA]|[KV]} 5.1815;5.1623;5.1127;4.9917;4.7334;4.2665;4.2665;4.2429;4.1933;4.0723 -;-;-;-;-;-;-;-;-;- 1321 1 1.37 65900.5 1.0 6285 5380 11660 HBL1_DMSO_200M_050219_1,11667 HBL1_DMSO_200M_050219_1,11667,LSPFPSQVQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11668 60.239 114.0 947900.0 25 0 84625.0 + 32175 RVVAEELENV 10 115 579.3118734995113 1156.6091940658223 2 579.3116332888603 MULTI CID FTMS 0 0 0 11660 946492.625 1.0 0 0.0 8 Unmodified _RVVAEELENV_ ENSG00000167196|ENST00000308275|FBXO22;nc|ENSG00000167196|Q8NEZ5-3|FBXO22 53.40400417844725 0.0601721406801337 3 {[QN]|[E{I|L}]|[KN]}RRE{I|L}ENV 9 5 + 72.8 0.0 0.0 6.2943 6.2943 85.112 0.0 0.0 0.0 5.808706922580242 14.973024840566469 5.808706922580242 5.808706922580242 0 0.8252574989159953 1.0457574905606752 1.110924374808178 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}RRE{I|L}ENV;[DV]Q[{I|L}V]E{I|L}ENV;[DV][{I|L}A]RE{I|L}ENV;{[QN]|[E{I|L}]|[KN]}RRE{I|L}EGGV;{[QN]|[E{I|L}]|[KN]}[VG]RE{I|L}ENV;{[QN]|[E{I|L}]|[KN]}R[VG]E{I|L}ENV;{[QD]|[EN]|[WG]|[KD]|[RS]}V[{I|L}V]E{I|L}ENV;[DV]Q[{I|L}V]E{I|L}EGGV;[DV][AG][{I|L}V]E{I|L}ENV;{[QN]|[E{I|L}]|[KN]}ERR{I|L}ENV 6.2943;5.7921;5.5819;5.4981;5.4981;5.4981;5.1435;4.9997;4.9997;4.9334 -;-;-;-;-;-;-;-;-;- 1337 1 1.37 85638.7 1.0 6286 5380 11660 HBL1_DMSO_200M_050219_1,11668 HBL1_DMSO_200M_050219_1,11668,RVVAEELENV True True RVVAEELENV 60.238818 579.31163328886 5308790.5 11660.0 ENSG00000167196|ENST00000308275|FBXO22;;nc|ENSG00000167196|Q8NEZ5-3|FBXO22 6.342091878255208 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11669 60.242 140.0 927220.0 25 0 142290.0 + 33601 SIPNRIPKI 9 120 346.5538754266155 1036.6397968800466 3 346.5531799197197 MULTI CID FTMS 0 0 0 11660 765795.625 1.0 0 0.0 9 Unmodified _SIPNRIPKI_ ENSG00000164323|ENST00000458385|CFAP97;nc|ENSG00000164323|Q9P2B7-2|CFAP97 23.78978130925829 0.2284941198415988 3 {[TV]|[{I|L}S]}{I|L}K 4 5 37.039 0.0 0.0 3.573 0.0 0.0 0.0 592.3187960260374 592.3187960260374 0.706969459718735 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.4247425010840047 {[TV]|[{I|L}S]}{I|L}K 3.573 - 284 + 1 1.37 110409.6 1.0 6287 5380 11660 HBL1_DMSO_200M_050219_1,11669 HBL1_DMSO_200M_050219_1,11669,SIPNRIPKI False True SIPNRIPKI 60.241643 346.55317991972 24919334.0 11660.0 nc|ENSG00000164323|Q9P2B7-2|CFAP97;;ENSG00000164323|ENST00000458385|CFAP97 2.656977812449137 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11670 60.246 259.0 755470.0 25 0 72212.0 26578 NVLSLPTP 8 173 420.7435151090008 839.4724772848016 2 420.7431213259697 MULTI CID FTMS 0 0 0 11660 781554.625 0.4528788974053273 -12 1.2311668395996094 10 Unmodified _NVLSLPTP_ chr16:28937825-28938673|48|68.96|0.86|6.33|+|ENST00000324662|CD19,CD19;ENSG00000177455|ENST00000538922|CD19;nc|ENSG00000177455|P15391-2|CD19 4.75600775471527 0.7954636275367004 3 {I|L} 1 7 11.594 0.0 0.0 1.3811 0.0 0.0 708.3776877113626 0.0 708.3776877113626 0.0 -3.3547064036788754 -3.3547064036788754 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3811 + + 55 + 1 1.37 153564.1 1.0 6288 5380 11660 HBL1_DMSO_200M_050219_1,11670 HBL1_DMSO_200M_050219_1,11670,NVLSLPTP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11671 60.248 89.0 1172800.0 25 0 129800.0 + 26546 NVIPSVTRV 9 102 492.7954945668971 983.5764362005942 2 492.7956115603447 MULTI CID FTMS 0 0 0 11660 748085.25 0.857638858535952 2 -0.1613807678222656 11 Unmodified _NVIPSVTRV_ ENSG00000125871|ENST00000377710|MGME1;ENST00000467391.1_1_20:17950715-17968822:+|nuORF 39.94969957227396 0.0757326808254658 3 {[NV]|[RG]}{I|L}V[KS][DP]{I|L} 9 5 + 39.005 0.0 0.0 3.9657 3.9657 77.758 0.0 0.0 0.0 7.147642715192507 6.020599913279625 6.020599913279625 6.020599913279625 0 0.9247425010840048 0.0 0.6139829889124311 0.3494850021680094 {[NV]|[RG]}{I|L}V[KS][DP]{I|L};{[NV]|[RG]}{I|L}V[KS][EP]V;{[NV]|[RG]}V{I|L}[KS][DP]{I|L};{[NV]|[RG]}V{I|L}[KS][EP]V 3.9657;3.3536;2.0978;1.4857 -;-;-;- 667 + 1 1.37 85295.7 1.0 6289 5380 11660 HBL1_DMSO_200M_050219_1,11671 HBL1_DMSO_200M_050219_1,11671,NVIPSVTRV True True NVIPSVTRV 60.248403 492.795611560345 10831972.0 11660.0 ENSG00000125871|ENST00000377710|MGME1;;ENST00000467391.1_1_20:17950715-17968822:+|nuORF 1.5239164034525554 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11672 60.251 119.0 466540.0 25 0 30809.0 + 33850 SLESIKPV 8 103 436.7563500384719 871.4981471437437 2 436.7561523318291 MULTI CID FTMS 0 0 0 11660 668917.875 0.2448248102763648 -12 1.2311668395996094 12 Unmodified _SLESIKPV_ REV__ENSG00000112984|ENST00000394894|KIF20A;REV__nc|ENSG00000112984|O95235-2|KIF20A 9.347437153973935 0.7675937258251505 3 V 1 -1 11.594 0.0 0.0 1.3303 0.0 0.0 754.4189367939375 0.0 754.4189367939375 0.0 2.06090223893324 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3303 + + 49 + 1 1.37 49796.3 1.0 6290 5380 11660 HBL1_DMSO_200M_050219_1,11672 HBL1_DMSO_200M_050219_1,11672,SLESIKPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11673 60.254 132.0 727160.0 25 0 77613.0 21800 LPNHRVLIM 9 106 546.8225789261475 1091.6306049190948 2 546.8233520388603 MULTI CID FTMS 0 0 0 11660 647576.6875 0.930382329282938 -2 0.2165336608886718 13 Unmodified _LPNHRVLIM_ ENSG00000114779|ENST00000361143|ABHD14B;ENST00000461108.5_1_3:52003444-52003858:-|nuORF;ENST00000487005.1_1_3:52003444-52008077:-|nuORF;nc|ENSG00000114779|Q96IU4-2|ABHD14B 48.345845343767074 0.0439967357579942 3 KVVDK 5 8 52.929 0.0 0.0 4.8486 0.0 0.0 0.0 519.2693575494749 519.2693575494749 2.2667726638095687 0.0 0.0 0.0 0 1.2614393726401687 0.8860566476931632 0.0 0.0 KVVDK 4.8486 - 254 + 1 1.37 79541.8 1.0 6291 5380 11660 HBL1_DMSO_200M_050219_1,11673 HBL1_DMSO_200M_050219_1,11673,LPNHRVLIM True True KVVDRIYSL 60.253557 546.8239 6014428.5 11660.0 nc|ENSG00000066279|Q8IZT6-2|ASPM;;ENSG00000066279|ENST00000367409|ASPM 4.38332200050354 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11674 60.255 78.0 1228500.0 25 0 142300.0 + 6048 DSFEFKAHV 9 124 540.2609309213149 1078.5073089094296 2 540.2606689333916 MULTI CID FTMS 0 0 0 11660 630061.6875 0.2646518221331642 -3 0.3463020324707031 14 Unmodified _DSFEFKAHV_ ENSG00000101596|ENST00000320876|SMCHD1;nc|ENSG00000101596|A6NHR9-2|SMCHD1 78.06048673739656 0.0179866705178931 3 DS{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV 9 0 + 98.41 0.0 0.0 9.1246 9.1246 84.423 0.0 0.0 0.0 36.47817481888637 1.165055690714368 1.165055690714368 1.165055690714368 0 1.4947026752325154 2.0 0.4247425010840047 0.0 + + DS{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV;DS{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAVH;DS{M(Oxidation (M))|F}EV[RP]MV;DS{M(Oxidation (M))|F}V[TA]{[CT]|[{M(Oxidation (M))|F}G]}HV;DS{M(Oxidation (M))|F}V[TA]{[CT]|[{M(Oxidation (M))|F}G]}VH;DS{M(Oxidation (M))|F}VE[RP]MV;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}VR[YG]HV;[HA]K{M(Oxidation (M))|F}T[HC]HV;[KG][RN]E[HC]HV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HA]T[HC]HV 9.1246;9.0166;5.867;5.4945;5.3864;5.2716;1.7896;1.0498;0.56322;0.4898 +;-;-;-;-;-;-;-;-;- + 514 + 1 1.37 76614.2 1.0 6292 5380 11660 HBL1_DMSO_200M_050219_1,11674 HBL1_DMSO_200M_050219_1,11674,DSFEFKAHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11675 60.26 225.0 570340.0 25 0 64051.0 + 22519 LPWEEREKI 9 100 600.3242230168966 1198.633893100593 2 600.3248168826103 MULTI CID FTMS 0 0 0 11660 538464.625 0.5856526343252242 -2 0.2165336608886718 15 Unmodified _LPWEEREKI_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 44.391923383255 0.0526658857881241 3 {I|L}PWEE{[RE]|[WV]}K{I|L} 9 0 + 89.606 0.0 0.0 7.4757 7.4757 96.049 0.0 0.0 0.0 58.06356549837645 13.657424843733637 13.657424843733637 41.9825221775622 0 1.579689690656103 2.0 0.4247425010840047 0.75 + + {I|L}PWEE{[RE]|[WV]}K{I|L};{I|L}P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WM][HQ];[{I|L}P]EET[C(Carbamidomethyl (C))K]P{I|L}{I|L};[K{I|L}][WD]EWP{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WK]EWP{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WK]{M(Oxidation (M))|F}{I|L}[HQ]{I|L};{I|L}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WM][HQ];{NN|[MP]|[D{I|L}]|[EV]}[WK]{M(Oxidation (M))|F}[HQ]{I|L}{I|L} 7.4757;3.9731;2.818;2.1104;1.9401;1.7314;1.2808;0.83433 +;-;-;-;-;-;-;- + 438 + 1 1.37 97037.4 1.0 6293 5380 11660 HBL1_DMSO_200M_050219_1,11675 HBL1_DMSO_200M_050219_1,11675,LPWEEREKI True True LPWEEREKI 60.259612 600.32481688261 39296639.0 11660.0 nc|ENSG00000118058|Q03164-2|KMT2A;;nc|ENSG00000118058|Q03164|KMT2A;;ENSG00000118058|ENST00000534358|KMT2A 4.858948866526286 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11676 60.264 212.0 450070.0 25 0 85352.0 + -1 RYPEEDYESF 10 77 668.3615475735969 667.3542711069969 1 668.3618041872978 MULTI CID FTMS 0 0 0 11660 517403.8125 1.0 0 0.0 16 nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C;ENSG00000137145|ENST00000434457|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C 3 {NN|[MP]|[D{I|L}]|[EV]}PNP{I|L} 6 -1 {NN|[MP]|[D{I|L}]|[EV]} + + 27.792 9.8059 4.2987 4.1645 4.1645 53.012 0.0 0.0 0.0 0.0 0.3186565554395315 0.0 0.0 0 0.6549471895720984 0.0 0.0 0.805462187404089 {NN|[MP]|[D{I|L}]|[EV]}PNP{I|L} 4.1645 - 90 + 1 1.37 72912.8 1.0 6294 5380 11660 HBL1_DMSO_200M_050219_1,11676 HBL1_DMSO_200M_050219_1,11676, False False RYPEEDYESF 60.263643 668.361804187298 2709249.75 11660.0 nc|ENSG00000137145|Q5VZ89-5|DENND4C;;nc|ENSG00000137145|Q5VZ89-3|DENND4C;;ENSG00000137145|ENST00000434457|DENND4C;;nc|ENSG00000137145|Q5VZ89|DENND4C 5.780599753061931 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11677 60.267 188.0 563890.0 25 0 89688.0 + 19812 LGVRGWAP 8 102 428.2453654474736 0 428.2434265017509 PEAK CID FTMS 0 0 0 11660 521404.40625 0.3984972076197616 -10 1.026165008544922 17 Unmodified _LGVRGWAP_ REV__ENST00000313116.11_1_X:47326897-47326969:-|nuORF 2.889219685676258 0.5898224805723975 3 M 1 -1 2.2185 0.0 0.0 0.25963 0.0 0.0 652.3652903658472 68.05125604801015 720.4165464138573 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.25963 - 6 + 1 1.37 87150.5 1.0 6295 5380 11660 HBL1_DMSO_200M_050219_1,11677 HBL1_DMSO_200M_050219_1,11677,LGVRGWAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11678 60.269 86.0 376200.0 25 0 19872.0 -1 LPDCRPLTV 9 82 535.7845326720227 1069.5545124108453 2 535.7843505740166 MULTI CID FTMS 0 0 0 11660 535420.0625 0.3239254754300934 2 -0.1613807678222656 18 Carbamidomethyl (C) _LPDC(Carbamidomethyl (C))RPLTV_ ENSG00000085265|ENST00000371806|FCN1;ENSG00000160339|ENST00000291744|FCN2;nc|ENSG00000160339|Q15485-2|FCN2 16.942295170755138 0.3780752226737986 3 TV 2 -1 18.94 0.0 0.0 1.7708 0.0 0.0 851.4275267924844 0.0 851.4275267924844 0.0 3.2263728016968685 0.0 0.0 0 0.3807196863200844 0.0 0.2614393726401688 0.0 TV 1.7708 + + 58 + 1 1.37 34297.8 1.0 6296 5380 11660 HBL1_DMSO_200M_050219_1,11678 HBL1_DMSO_200M_050219_1,11678,LPDCRPLTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11679 60.272 121.0 628510.0 25 0 53133.0 + 31048 RLIEESVTV 9 101 523.2979499509659 1044.5813469687316 2 523.2981445193291 MULTI CID FTMS 0 0 0 11660 497738.5 0.147362629098863 -3 0.3463020324707031 19 Unmodified _RLIEESVTV_ ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769-3|NUP160;nc|ENSG00000030066|Q12769|NUP160 34.221707139014875 0.1071766711162635 3 EESVTV 6 3 47.45 0.0 0.0 4.5425 0.0 0.0 382.2691212384781 0.0 382.2691212384781 0.0 23.970982706302262 0.0 0.0 0 0.8807196863200843 0.0 0.7742275032520141 0.0 + EESVTV 4.5425 + + 76 1 1.37 67208.9 1.0 6297 5380 11660 HBL1_DMSO_200M_050219_1,11679 HBL1_DMSO_200M_050219_1,11679,RLIEESVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11680 60.276 219.0 252190.0 25 0 31900.0 + 41935 VQHVHFDGL 9 93 351.1820096989666 1050.5241996971 3 351.1816589236259 MULTI CID FTMS 0 0 0 11660 436671.03125 1.0 0 0.0 20 Unmodified _VQHVHFDGL_ ENSG00000100347|ENST00000350028|SAMM50 11.640296217721598 0.521594087909532 3 {[QV]|[N{I|L}]|[RA]|[KV]}H[HV]{[MG]|[TS]}M{I|L} 9 3 {[QV]|[N{I|L}]|[RA]|[KV]}H[HV]{[MG]|[TS]}M + + 12.764 1.176 0.12791 1.215 1.215 48.423 0.0 0.0 0.0 0.0 -5.194590330151847 -5.194590330151847 0.0 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}H[HV]{[MG]|[TS]}M{I|L} 1.215 - 47 + 1 1.37 54162.6 1.0 6298 5380 11660 HBL1_DMSO_200M_050219_1,11680 HBL1_DMSO_200M_050219_1,11680,VQHVHFDGL False True VQHVHFDGL 60.275818 351.181658923626 2297413.0 11660.0 ENSG00000100347|ENST00000350028|SAMM50 3.524906953175863 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11682 60.281 9.8 8262600.0 25 0 1395900.0 + 41128 VPAALKVV 8 71 398.7681654055314 795.5217778778629 2 398.7681457400322 MULTI CID FTMS 0 0 0 11681 4570560.5 0.4316931697231108 1 -0.1082077026367187 1 Unmodified _VPAALKVV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 70.71552829651908 0.111000043122623 3 VPAA{I|L}KVV 8 0 + 67.724 0.0 0.0 8.5131 8.5131 92.734 0.0 0.0 0.0 22.76690857559868 8.742734275613671 8.742734275613671 8.742734275613671 0 2.132913167396961 1.6989700043360187 0.0 0.0 + + VPAA{I|L}KVV;[PA]A{I|L}VKVV;[PA]A{I|L}KVVV;[VP]AA{I|L}KVV;[PA]AV{I|L}KVV;[PA]VA{I|L}KVV;[VP][VG]VKVV;[VP][VG]KVVV;[K{I|L}]AVAPVV;[VP]K[VG]VVV 8.5131;7.4141;7.1591;6.7983;6.7911;6.1681;6.0657;5.8107;5.2448;5.2109 +;-;-;+;-;-;-;-;-;- + 396 + 1 1.37 70833.1 1.0 6299 5381 11681 HBL1_DMSO_200M_050219_1,11682 HBL1_DMSO_200M_050219_1,11682,VPAALKVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11683 60.282 10.0 5119400.0 25 0 715120.0 + 18827 LPFRGSGTAI 10 94 509.78739779112425 1017.5602426490484 2 509.7877075076103 MULTI CID FTMS 0 0 0 11681 3376554.5 0.3872040113068856 1 -0.1082077026367187 2 Unmodified _LASCARTLAL_ nc|ENSG00000122484|Q8IXW5-2|RPAP2;ENSG00000122484|ENST00000610020|RPAP2 32.78568957990786 0.2337485590374503 3 {[DA]|[EG]}RAA{[MS]|[{M(Oxidation (M))|F}A]}{I|L}A{I|L} 10 5 + 46.393 0.0 0.0 4.5592 4.5592 81.633 0.0 0.0 0.0 9.93160575469694 15.02697515943353 9.93160575469694 8.564921830680703 0 0.9247425010840048 1.3979400086720375 0.7302046884880937 0.0 {[DA]|[EG]}RAA{[MS]|[{M(Oxidation (M))|F}A]}{I|L}A{I|L};{[DA]|[EG]}RAA{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[H{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}A{I|L};[{I|L}A]{[WN]|[YH]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[H{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}{I|L};[{I|L}A]{[WN]|[YH]}{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}{I|L};[{I|L}A]{[QG]|[NA]}[W{M(Oxidation (M))|F}]{I|L}A{I|L};[{I|L}A]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}A{I|L};[{I|L}A]{[QG]|[NA]}[W{M(Oxidation (M))|F}]A{I|L}{I|L};[{I|L}A]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A{I|L}{I|L} 4.5592;3.7175;3.5832;3.5054;2.7415;2.6636;2.5697;2.2739;1.7825;1.4867 -;-;-;-;-;-;-;-;-;- 241 1 1.37 44050.4 1.0 6300 5381 11681 HBL1_DMSO_200M_050219_1,11683 HBL1_DMSO_200M_050219_1,11683,LASCARTLAL False False LPFRGSGTAI 60.281688 509.78770750761 85977168.0 11681.0 nc|ENSG00000122484|Q8IXW5-2|RPAP2;;ENSG00000122484|ENST00000610020|RPAP2 3.050480683644613 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11684 60.283 29.0 3000000.0 25 0 233240.0 + 22111 LPPPVQTQI 9 109 496.7924844808842 991.5704160285684 2 496.7923156619072 MULTI CID FTMS 0 0 0 11681 1908452.875 0.2645957041407304 3 -0.3689117431640625 3 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 85.27202061508552 0.0162393975915471 3 [{I|L}P]PPVQTQ{I|L} 9 0 + 81.45 0.0 0.0 8.2143 8.2143 64.773 0.0 0.0 0.0 23.750612633917 16.478174818886373 16.478174818886373 0.0 0 1.4802046884880935 2.0 0.5 0.3054621874040891 + + [{I|L}P]PPVQTQ{I|L};[{I|L}P]PNP{I|L}TQ{I|L};[{I|L}P]PPN{I|L}TQ{I|L};[{I|L}P]NPP{I|L}TQ{I|L};[{I|L}P]PN{I|L}PTQ{I|L};[{I|L}P]PPVQT[AG]{I|L};[{I|L}P]PNP{I|L}T[AG]{I|L};[{I|L}P]NP{I|L}PTQ{I|L};[{I|L}P]PPN{I|L}T[AG]{I|L};[{I|L}P]PPV[AG]TQ{I|L} 8.2143;8.2143;7.9107;7.813;7.5555;7.2856;7.2856;7.1542;6.982;6.9776 +;-;-;-;-;-;-;-;-;- + 1664 1 1.37 72043.9 1.0 6301 5381 11681 HBL1_DMSO_200M_050219_1,11684 HBL1_DMSO_200M_050219_1,11684,LPPPVQTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11685 60.285 69.0 1825000.0 25 0 326990.0 + 44638 YPFKPPKV 8 89 325.86048683472575 974.5596311043772 3 325.8598815798759 MULTI CID FTMS 0 0 0 11681 695549.4375 0.0090175974365447 14 -1.1114425659179688 4 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 21.74664581756881 0.5868176546531598 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 49.282 0.0 0.0 5.0569 5.0569 74.149 0.0 0.0 0.0 18.106478773194752 0.9691001300805624 0.9691001300805624 0.9691001300805624 0 0.0 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;YP{M(Oxidation (M))|F}KPPVK;[KP]PKVY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[HG]|PP}KKVY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KP]P[RH]V{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]K[HS]KV;Y[{I|L}T]K[HS]VK;{[HG]|PP}K[RH]V{[QN]|[E{I|L}]|[KN]} 5.0569;4.9575;2.0886;1.5781;1.4183;0.72987;0.70111;0.60167;0.059608 +;-;-;-;-;-;-;-;- + 303 + 1 1.37 106194.9 1.0 6302 5381 11681 HBL1_DMSO_200M_050219_1,11685 HBL1_DMSO_200M_050219_1,11685,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11686 60.286 68.0 795320.0 25 0 115930.0 + 13832 HTVEDLVKV 9 88 520.2931310373273 1038.5717091414544 2 520.2929565310478 MULTI CID FTMS 0 0 0 11681 690038.4375 0.21487462647178 3 -0.3689117431640625 5 Unmodified _HTVEDLVKV_ ENSG00000177084|ENST00000320574|POLE 54.773552608820026 0.0299037012502309 3 D{I|L}VVQ 5 6 38.176 0.0 0.0 3.6758 0.0 0.0 466.2178822248063 0.0 466.2178822248063 0.0 24.843904019827885 0.0 0.0 0 1.0138793319624575 0.0 1.305462187404089 0.0 D{I|L}VVQ 3.6758 - 146 1 1.37 47758.2 1.0 6303 5381 11681 HBL1_DMSO_200M_050219_1,11686 HBL1_DMSO_200M_050219_1,11686,HTVEDLVKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11687 60.289 116.0 526800.0 25 0 35514.0 + + 2517 KTLQEVTQL 9 116 530.3053918873869 1058.5962308415735 2 530.3054077029228 MULTI CID FTMS 0 0 0 11681 269318.21875 0.661673357732884 1 -0.1082077026367187 6 Unmodified _ASAIDKITQL_ ENSG00000084754|ENST00000380649|HADHA 32.78568957990786 0.2337485590374503 3 [AG]T[K{I|L}]EVTQ{I|L} 10 -1 + 55.904 0.0 0.0 5.2809 5.2809 79.004 0.0 0.0 0.0 3.406206186877938 14.146518864155126 3.406206186877938 3.406206186877938 0 0.7302046884880937 1.3010299956639813 1.086696871556164 0.0 [AG]T[K{I|L}]EVTQ{I|L};{[VA]|[{I|L}G]}A[KT]EVTQ{I|L};[QT][K{I|L}]EVTQ{I|L};[AG]{I|L}[KT]EVTQ{I|L};{[QN]|[E{I|L}]|[KN]}T[KQ]VTQ{I|L};{[VA]|[{I|L}G]}K[TA]EVTQ{I|L};[AG]T[K{I|L}]EVT[AG]{I|L};[Q{I|L}][KT]EVTQ{I|L};{[VA]|[{I|L}G]}A[KT]EVT[AG]{I|L};[QT][K{I|L}]EVT[AG]{I|L} 5.2809;4.9591;4.7715;4.7496;4.6835;4.5084;4.4152;4.3823;4.0934;3.9016 -;-;-;-;-;-;-;-;-;- 1457 1 1.37 51985.5 1.0 6304 5381 11681 HBL1_DMSO_200M_050219_1,11687 HBL1_DMSO_200M_050219_1,11687,ASAIDKITQL False False KTLQEVTQL 60.288564 530.305407702923 2476240.5 11681.0 ENSG00000084754|ENST00000380649|HADHA 3.702729860941569 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11688 60.296 408.0 481790.0 25 0 96991.0 + 9828 FPEEEWRHV 9 140 410.1963560907189 1227.5672388723565 3 410.1962768435478 MULTI CID FTMS 0 0 0 11681 258839.078125 0.3233208811755774 3 -0.3689117431640625 7 Unmodified _FPEEEWRHV_ ENSG00000197037|ENST00000394152|ZSCAN25;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 65.23502041540118 0.0231836506122253 3 {M(Oxidation (M))|F}PEEEWRHV 9 0 + 79.268 0.0 0.0 6.4573 6.4573 84.195 0.0 0.0 0.0 9.719712763997563 4.471580313422194 4.471580313422194 4.471580313422194 0 0.1989700043360188 0.0 1.1382104921644451 0.7302046884880937 + + {M(Oxidation (M))|F}PEEEWRHV;{M(Oxidation (M))|F}PEEEWRVH;{M(Oxidation (M))|F}PEEEV[WR]H;{M(Oxidation (M))|F}PEEEV[RH]W;{M(Oxidation (M))|F}PEEE[K{I|L}]{[CP]|[EA]}H;[EP]E[K{I|L}][HC]{M(Oxidation (M))|F}PE;[TP][{I|L}V]WEEEPE;{M(Oxidation (M))|F}PEE[K{I|L}]E{[CP]|[EA]}H;[EP][RP]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EPE;{M(Oxidation (M))|F}PEV[{M(Oxidation (M))|F}E][QP]HV 6.4573;6.093;5.056;4.8237;4.6946;4.6547;4.6447;4.3486;4.2151;4.0266 +;-;-;-;-;-;-;-;-;- + 2079 + 1 1.37 156705.6 1.0 6305 5381 11681 HBL1_DMSO_200M_050219_1,11688 HBL1_DMSO_200M_050219_1,11688,FPEEEWRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11689 60.3 221.0 473480.0 25 0 53219.0 + 41266 VPHAITVSV 9 123 461.7705339039121 921.5265148746242 2 461.7711364626884 MULTI CID FTMS 0 0 0 11681 230333.90625 0.6353631832030069 1 -0.1082077026367187 8 Unmodified _VPHAITVSV_ ENSG00000137807|ENST00000679126|KIF23;ENST00000558303.5_1_15:69737113-69740143:+|nuORF;ENST00000560125.1_1_15:69737113-69739281:+|nuORF;nc|ENSG00000137807|Q02241-2|KIF23;nc|ENSG00000137807|Q02241-3|KIF23;nc|ENSG00000137807|Q02241|KIF23 30.22481116460888 0.1466181017706357 3 [HA]PVPV[R{M(Oxidation (M))|F}] 8 7 + 31.661 0.0 0.0 3.4357 3.4357 67.995 0.0 0.0 0.0 0.3762444850443458 0.6567532885598055 0.3762444850443458 0.1722032235195314 0 0.8252574989159953 0.6575773191777937 0.0 0.0 [HA]PVPV[R{M(Oxidation (M))|F}];[HA]PVVP[R{M(Oxidation (M))|F}];[R{M(Oxidation (M))|F}]TVP[R{M(Oxidation (M))|F}];[R{M(Oxidation (M))|F}]TV{I|L}{[WT]|[RM]};[R{M(Oxidation (M))|F}]TV{I|L}{[CA]|SS}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AVPV[R{M(Oxidation (M))|F}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VAPV[R{M(Oxidation (M))|F}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AVVP[R{M(Oxidation (M))|F}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VAVP[R{M(Oxidation (M))|F}];[R{M(Oxidation (M))|F}]TV{[DS]|[MA]|[CV]|TT}VV 3.4357;3.417;3.3949;3.2841;3.2212;3.0488;3.0355;3.0301;3.0168;2.8945 -;-;-;-;-;-;-;-;-;- 1029 1 1.37 87903.5 1.0 6306 5381 11681 HBL1_DMSO_200M_050219_1,11689 HBL1_DMSO_200M_050219_1,11689,VPHAITVSV False True VPHAITVSV 60.300007 461.771136462688 2585879.75 11681.0 nc|ENSG00000137807|Q02241-3|KIF23;;ENST00000560125.1_1_15:69737113-69739281:+|nuORF;;ENSG00000137807|ENST00000679126|KIF23;;ENST00000558303.5_1_15:69737113-69740143:+|nuORF;;nc|ENSG00000137807|Q02241|KIF23;;nc|ENSG00000137807|Q02241-2|KIF23 2.0308349331219997 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11690 60.308 422.0 375850.0 25 0 65951.0 + -1 DPTPVPNI 8 63 852.3335818402829 3405.3052214947315 4 852.8359252810478 MULTI CID FTMS 0 0 0 11681 220784.46875 1.0 0 0.0 9 ENSG00000173473|ENST00000254480|SMARCC1;ENST00000485737.1_1_3:47721925-47742822:-|nuORF 3 DPT[VP]P{[QV]|[N{I|L}]|[RA]|[KV]} 8 -1 26.776 0.0 0.0 0.78631 0.0 0.0 2553.8681009886755 0.0 2553.8681009886755 0.0 1.0307688054491848 0.0 0.0 0 0.0 0.0 0.805462187404089 0.535666875892183 DPT[VP]P{[QV]|[N{I|L}]|[RA]|[KV]} 0.78631 - 262 + 1 1.37 116493.4 1.0 6307 5381 11681 HBL1_DMSO_200M_050219_1,11690 HBL1_DMSO_200M_050219_1,11690, False False DPTPVPNI 60.307561 852.3349 3193521.25 11681.0 ENSG00000173473|ENST00000254480|SMARCC1;;ENST00000485737.1_1_3:47721925-47742822:-|nuORF 6.223661740620931 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11691 60.321 800.0 338670.0 25 0 34551.0 + 43196 VYYGHTNYIY 10 158 646.8010681450072 1291.5875833568143 2 646.8024169802666 MULTI CID FTMS 0 0 0 11681 217934.53125 0.56787571120806 -1 0.0531730651855468 10 Unmodified _VYYGHTNYIY_ ENSG00000137055|ENST00000397292|PLAA 85.64151623876279 0.0124443716933876 3 TGGYVY{I|L}Y 8 6 80.783 0.0 0.0 6.2545 0.0 0.0 357.14351088691564 0.0 357.14351088691564 0.0 30.95268634588521 0.0 0.0 0 0.805462187404089 0.0 1.885151878060192 0.0 TGGYVY{I|L}Y 6.2545 - 12577 1 1.37 208915.3 0.9100000262260436 6308 5381 11681 HBL1_DMSO_200M_050219_1,11691 HBL1_DMSO_200M_050219_1,11691,VYYGHTNYIY True True VYYGHTNYIY 60.321393 646.802416980267 4064310.25 11681.0 ENSG00000137055|ENST00000397292|PLAA 6.890062808990479 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11692 60.325 202.0 406490.0 25 0 33826.0 + 6682 EAYVQKLV 8 110 475.2713527187192 948.5281525042384 2 475.2713195681572 MULTI CID FTMS 0 0 0 11681 202220.859375 0.1943474435934278 1 -0.1082077026367187 11 Unmodified _EAYVQKLV_ ENSG00000158246|ENST00000289166|TENT5B;ENSG00000183508|ENST00000369448|TENT5C 46.92087301778293 0.1537303740847981 3 GQ{I|L}VY[W{I|L}] 7 6 24.175 0.0 0.0 2.5487 0.0 0.0 71.07423598457187 0.0 71.07423598457187 0.0 -0.6328752491604597 -0.6328752491604597 0.0 0 0.0 0.0 0.0 0.75 GQ{I|L}VY[W{I|L}] 2.5487 - 367 1 1.37 67849.5 1.0 6309 5381 11681 HBL1_DMSO_200M_050219_1,11692 HBL1_DMSO_200M_050219_1,11692,EAYVQKLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11693 60.339 800.0 376520.0 25 0 23458.0 + 45642 YVPETVYRV 9 196 563.3004221509449 1124.5862913686897 2 563.3002807497978 MULTI CID FTMS 0 0 0 11681 159155.078125 0.0770398232109853 3 -0.3689117431640625 12 Unmodified _YVPETVYRV_ ENSG00000082701|ENST00000264235|GSK3B;ENSG00000105723|ENST00000222330|GSK3A;nc|ENSG00000082701|P49841-2|GSK3B 49.93300154707207 0.0405168250806675 3 [YV]PETVRYV 9 2 + 76.826 0.0 0.0 6.8315 6.8315 82.412 0.0 0.0 0.0 24.01577116635302 4.6797787527979295 4.6797787527979295 2.4865124202832334 0 0.805462187404089 2.0 0.7742275032520141 0.6237125054200234 [YV]PETVRYV;[YV]PETVYRV;[YV]PETVRVY;[YV]PEVTRYV;[YV]PEVTYRV;[YV]PEVTRVY;[YV]PVETRYV;[YV]PVETYRV;[YV]VPETRYV;[YV]PVETRVY 6.8315;6.6103;6.4153;6.2961;6.075;5.88;5.7607;5.5396;5.5208;5.3446 -;+;-;-;-;-;-;-;-;- + 2256 + 1 1.37 229527.1 0.8199999928474426 6310 5381 11681 HBL1_DMSO_200M_050219_1,11693 HBL1_DMSO_200M_050219_1,11693,YVPETVYRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11694 60.353 800.0 191730.0 25 0 11023.0 + 31860 RTIEDLDENQL 11 147 673.3332681692727 1344.6519834053454 2 673.3340331912041 MULTI CID FTMS 0 0 0 11681 165656.125 0.5960551933357808 1 -0.1082077026367187 13 Unmodified _RTIEDLDENQL_ ENSG00000146476|ENST00000367294|ARMT1 73.1962812333195 0.0231417158388345 3 [{I|L}T]RED{I|L}DENQ{I|L} 11 2 + 94.33 0.0 0.0 7.0152 7.0152 88.802 0.0 0.0 0.0 7.385808768867136 16.57577319177794 7.385808768867136 7.385808768867136 0 0.5387254899964358 0.8538719643217619 1.666386562212267 1.2302046884880935 [{I|L}T]RED{I|L}DENQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}AD{I|L}DENQ{I|L};[{I|L}T]RED{I|L}DEGGQ{I|L};[{I|L}T]RED{I|L}DEN[AG]{I|L};{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}AD{I|L}DENQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}KKD{I|L}DENQ{I|L};{[TV]|[{I|L}S]}[W{I|L}]D{I|L}DENQ{I|L};{I|L}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}D{I|L}DENQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}W{I|L}DENQ{I|L};[{I|L}T][DV]AD{I|L}DENQ{I|L} 7.0152;6.4659;6.3363;6.3363;6.204;6.1204;6.0681;6.0458;5.9742;5.8687 -;-;-;-;-;-;-;-;-;- 3085 1 1.37 113467.8 0.7900000214576721 6311 5381 11681 HBL1_DMSO_200M_050219_1,11694 HBL1_DMSO_200M_050219_1,11694,RTIEDLDENQL True True RTIEDLDENQL 60.352913 673.334033191204 1505046.875 11681.0 ENSG00000146476|ENST00000367294|ARMT1 6.919585069020589 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11695 60.357 115.0 459270.0 25 0 26539.0 -1 0 86 506.64963456490295 3539.496506688121 7 506.9365722537041 MULTI CID FTMS 0 0 0 11681 146432.21875 0.5268680936019535 1 -0.1082077026367187 14 3 {I|L} 1 -1 16.99 0.0 0.0 0.48 0.0 0.0 3408.401503491635 0.0 3408.401503491635 0.0 4.225490200071285 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.48 - 188 + 1 1.37 49812.3 1.0 6312 5381 11681 HBL1_DMSO_200M_050219_1,11695 HBL1_DMSO_200M_050219_1,11695, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11696 60.36 166.0 541440.0 25 0 133660.0 + 39375 VAHSPTALI 9 117 454.7618203646889 907.5090877961778 2 454.7632934451103 MULTI CID FTMS 0 0 0 11681 127953.3359375 0.3790643814030368 -1 0.0531730651855468 15 Unmodified _VAHSPTALI_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 36.04419817259434 0.0971720506436186 3 [HS]AV[TP]A{I|L}{I|L} 9 4 + 37.374 0.0 0.0 4.1183 4.1183 78.959 0.0 0.0 0.0 4.137342758552698 21.889334387378845 4.137342758552698 6.766936096248667 0 0.5 0.0 0.7302046884880937 0.0 [HS]AV[TP]A{I|L}{I|L};{[SA]|[TG]}HV[TP]A{I|L}{I|L};[HS]AV[{I|L}A][TP]{I|L};[VP][VS]A[HS]V{I|L};[{I|L}P][TA]A[HS]V{I|L};[{I|L}A][TP]A[HS]V{I|L};{[SA]|[TG]}HV[{I|L}A][TP]{I|L} 4.1183;3.3726;0.94093;0.86588;0.64741;0.56964;0.19527 -;-;-;-;-;-;- 315 1 1.37 72013.2 1.0 6313 5381 11681 HBL1_DMSO_200M_050219_1,11696 HBL1_DMSO_200M_050219_1,11696,VAHSPTALI True True VAHSPTALI 60.360011 454.76329344511 3741349.0 11681.0 nc|ENSG00000141076|Q969X6-3|UTP4;;ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 3.646660804748535 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11697 60.374 800.0 197750.0 25 0 13010.0 + 19630 LGESRRQL 8 184 479.7732165810685 957.5318802289372 2 480.7714111208916 MULTI CID FTMS 0 0 0 11681 125471.2578125 0.2670451903927641 11 -0.8863143920898438 16 Unmodified _LGESRRQL_ ENST00000323374.8_2_17:74380737-74381645:+|nuORF 13.50788311687929 0.7113601687236069 3 K{[WT]|[RM]}QWP{I|L} 7 7 + 22.36 0.0 0.0 2.3352 2.3352 78.557 0.0 0.0 0.0 9.596259508878564 6.285626825958985 6.285626825958985 9.285055826186657 0 0.0 0.0 0.2887254899964357 0.0 K{[WT]|[RM]}QWP{I|L};K{[WT]|[RM]}Q[{I|L}P]W;K{[WT]|[RM]}[AG]WP{I|L};K{[WT]|[RM]}QW{I|L}P;K{[WT]|[RM]}[AG]W{I|L}P 2.3352;1.3655;1.3608;1.345;0.37056 -;-;-;-;- 908 + 1 1.37 123427.6 0.6700000166893005 6314 5381 11681 HBL1_DMSO_200M_050219_1,11697 HBL1_DMSO_200M_050219_1,11697,LGESRRQL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11698 60.376 118.0 531380.0 25 0 37812.0 291 ADRLAQMSIC 10 90 554.2673566139629 1106.5201602947257 2 554.2682372927666 MULTI CID FTMS 0 0 0 11681 120374.3984375 0.0981456181992033 -2 0.2214851379394531 17 Unmodified _ADRLAQMSIC_ ENSG00000162813|ENST00000322067|BPNT1;ENST00000482136.5_1_1:220240458-220263036:-|nuORF;ENST00000548668.1_1_1:220240634-220247398:-|nuORF;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1 11.494710602746466 0.654671931888957 3 {[DA]|[EG]}{I|L}RA{I|L}Q 7 6 52.597 0.0 0.0 4.7534 0.0 0.0 0.0 336.06817001592555 336.06817001592555 39.10203694495229 0.0 0.0 0.0 0 1.242992819099939 2.0 0.0 0.5941876774005248 {[DA]|[EG]}{I|L}RA{I|L}Q 4.7534 - 101 1 1.37 53646.2 1.0 6315 5381 11681 HBL1_DMSO_200M_050219_1,11698 HBL1_DMSO_200M_050219_1,11698,ADRLAQMSIC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11699 60.38 180.0 288080.0 25 0 15054.0 + 24929 MPPLNTQRI 9 88 535.2940388764163 0 535.2947265505791 PEAK CID FTMS 0 0 0 11681 111693.6015625 0.2496017344906381 4 -0.4268836975097656 18 Unmodified _MPPLNTQRI_ nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078-8|MEF2A 17.11289562659939 0.230679707888486 3 PP{M(Oxidation (M))|F} 3 7 18.94 0.0 0.0 1.7725 0.0 0.0 131.0403067122666 593.3425997369749 724.3829064492415 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 PP{M(Oxidation (M))|F} 1.7725 - 15 + 1 1.37 49446.3 1.0 6316 5381 11681 HBL1_DMSO_200M_050219_1,11699 HBL1_DMSO_200M_050219_1,11699,MPPLNTQRI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11700 60.381 61.0 846030.0 25 0 107500.0 + 27307 PHNQFIKMM 9 93 382.52445418491845 1144.5515331549557 3 382.5240356326103 MULTI CID FTMS 0 0 0 11681 109526.0 0.0669341154923027 -2 0.2214851379394531 19 Unmodified _PHNQFIKMM_ ENSG00000162511|ENST00000294507|LAPTM5 28.486842064014134 0.1687311288560894 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NQ{M(Oxidation (M))|F}{I|L} 6 3 28.421 0.0 0.0 2.4832 0.0 0.0 0.0 405.1632634618492 405.1632634618492 11.6503780424059 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.805462187404089 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NQ{M(Oxidation (M))|F}{I|L} 2.4832 + + 225 1 1.37 48618.6 1.0 6317 5381 11681 HBL1_DMSO_200M_050219_1,11700 HBL1_DMSO_200M_050219_1,11700,PHNQFIKMM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11701 60.384 77.0 605590.0 25 0 83300.0 + 24768 MPHNQFIKM 9 77 573.2831111860442 1144.5516694388882 2 573.7908203005791 MULTI CID FTMS 0 0 0 -1 0 20 Unmodified _MPHNQFIKM_ ENSG00000162511|ENST00000294507|LAPTM5 20.453626601364224 0.2830276176381075 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}HPM{I|L}KM 9 6 + 43.432 0.0 0.0 3.7947 3.7947 52.014 0.0 0.0 0.0 1.7609125905568137 5.468939214976423 1.7609125905568137 0.0 0 0.6331596456423735 0.0 0.0 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}HPM{I|L}KM;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}H{I|L}PMKM;[HN]Q{M(Oxidation (M))|F}{I|L}PMKM;[HN]Q{M(Oxidation (M))|F}PM{I|L}KM;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}HP{I|L}MKM;{[QN]|[E{I|L}]|[KN]}H{M(Oxidation (M))|F}PM{I|L}KM;{[QN]|[E{I|L}]|[KN]}H{M(Oxidation (M))|F}{I|L}PMKM;[HN]Q{M(Oxidation (M))|F}P{I|L}MKM;{[QN]|[E{I|L}]|[KN]}H{M(Oxidation (M))|F}P{I|L}MKM;[HN][AG]{M(Oxidation (M))|F}PM{I|L}KM 3.7947;3.7947;3.6409;3.6409;3.5317;3.5317;3.5317;3.3778;3.2687;2.8363 -;-;-;-;-;-;-;-;-;- 465 1 1.37 38596.8 1.0 6318 5381 11681 HBL1_DMSO_200M_050219_1,11701 HBL1_DMSO_200M_050219_1,11701,MPHNQFIKM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11703 60.389 19.0 2119200.0 25 0 203190.0 + 17762 KQFEGTVEI 9 66 525.7768032503222 1049.5390535674444 2 525.7768432497978 MULTI CID FTMS 0 0 0 11702 2860533.5 0.7488460987453474 2 -0.2607040405273437 1 Unmodified _KQFEGTVEI_ ENSG00000139618|ENST00000380152|BRCA2 47.74868867922204 0.0453060283459952 3 TVE{I|L} 4 5 48.22 0.0 0.0 4.5944 0.0 0.0 589.2905140607437 0.0 589.2905140607437 0.0 37.25054710168188 0.0 0.0 0 0.7302046884880937 0.0 1.3494850021680094 0.0 + TVE{I|L} 4.5944 + + 90 1 1.38 39833.7 1.0 6319 5382 11702 HBL1_DMSO_200M_050219_1,11703 HBL1_DMSO_200M_050219_1,11703,KQFEGTVEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11704 60.39 21.0 2561600.0 25 0 279570.0 + 15378 IPNFPRSTV 9 70 515.7872433178525 1029.5599337025048 2 515.7873412966728 MULTI CID FTMS 0 0 0 11702 2616889.75 0.7074619086204297 -1 0.1082077026367187 2 Unmodified _IPNFPRSTV_ ENSG00000198805|ENST00000361505|PNP;ENST00000557229.5_1_14:20937683-20942788:+|nuORF 38.17557092003332 0.0854718145212029 3 {I|L}PN{M(Oxidation (M))|F}P 5 4 63.047 0.0 0.0 6.1237 0.0 0.0 0.0 458.23749719791255 458.23749719791255 37.361081649832784 0.0 0.0 0.0 0 0.6861818737241735 1.6989700043360187 0.0 0.4247425010840047 + {I|L}PN{M(Oxidation (M))|F}P 6.1237 + + 53 + 1 1.38 48159.9 1.0 6320 5382 11702 HBL1_DMSO_200M_050219_1,11704 HBL1_DMSO_200M_050219_1,11704,IPNFPRSTV True True IPNFPRSTV 60.389894 515.787341296673 77719456.0 11702.0 ENSG00000198805|ENST00000361505|PNP;;ENST00000557229.5_1_14:20937683-20942788:+|nuORF 5.511769771575928 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11705 60.391 11.0 5344600.0 25 0 634280.0 + 22520 LPWEEREKI 9 71 400.5517769130068 1198.6335013392204 3 400.5518371462822 MULTI CID FTMS 0 0 0 11702 3950440.25 1.0 0 0.0 3 Unmodified _LPWEEREKI_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 15.738622578938676 0.4106572216562794 3 {I|L}P{I|L}W{M(Oxidation (M))|F}{[WT]|[RM]}P 8 6 54.708 0.0 0.0 4.5642 0.0 0.0 0.0 155.06167017154533 155.06167017154533 42.23349263777612 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.9247425010840048 0.0 {I|L}P{I|L}W{M(Oxidation (M))|F}{[WT]|[RM]}P 4.5642 - 130 + 1 1.38 48996.4 1.0 6321 5382 11702 HBL1_DMSO_200M_050219_1,11705 HBL1_DMSO_200M_050219_1,11705,LPWEEREKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11706 60.393 56.0 992570.0 25 0 136760.0 + -1 CWKVLYYIVP 10 74 670.8552394650153 1339.6959259968305 2 670.8556396365166 MULTI CID FTMS 0 0 0 11702 1094112.0 1.0 0 0.0 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))WKVLYYIVP_ REV__ENSG00000100888|ENST00000646647|CHD8;REV__ENSG00000177200|ENST00000447540|CHD9;REV__ENST00000554384.1_1_14:21876861-21881122:-|nuORF;REV__nc|ENSG00000100888|Q9HCK8-2|CHD8;REV__nc|ENSG00000177200|Q3L8U1-2|CHD9;REV__nc|ENSG00000177200|Q3L8U1-3|CHD9 7.910154910731844 0.6900473968920092 3 [{I|L}T]{I|L}T[PS]AT{I|L} 9 -1 36.348 0.0 0.0 2.7131 0.0 0.0 0.0 439.1611719287243 439.1611719287243 18.0898667944334 0.0 0.0 0.0 0 0.0 0.958607314841775 1.805462187404089 0.0 [{I|L}T]{I|L}T[PS]AT{I|L} 2.7131 - 480 1 1.38 49790.9 1.0 6322 5382 11702 HBL1_DMSO_200M_050219_1,11706 HBL1_DMSO_200M_050219_1,11706,CWKVLYYIVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11707 60.394 49.0 1212700.0 25 0 93979.0 + 6050 DSFEFKAHV 9 95 360.5096502645188 1078.5071213937565 3 360.5097839236259 MULTI CID FTMS 0 0 0 11702 865110.375 1.0 0 0.0 5 Unmodified _DSFEFKAHV_ ENSG00000101596|ENST00000320876|SMCHD1;nc|ENSG00000101596|A6NHR9-2|SMCHD1 28.49450938151212 0.1686335738423394 3 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV 9 0 + 44.79 0.0 0.0 4.153 4.153 74.64 0.0 0.0 0.0 7.147642715192504 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.25 0.0 0.5 0.0 + + {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAVH;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E[W{I|L}][PS]V 4.153;3.8739;1.3075 +;-;- + 121 + 1 1.38 52463.5 1.0 6323 5382 11702 HBL1_DMSO_200M_050219_1,11707 HBL1_DMSO_200M_050219_1,11707,DSFEFKAHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11708 60.395 65.0 1177500.0 25 0 96844.0 + 44652 YPFKPPKV 8 85 488.2869567505858 974.5593605679716 2 488.2867919802666 MULTI CID FTMS 0 0 0 11702 788448.9375 0.0232345583320956 17 -1.3277549743652344 6 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 36.04419817259434 0.3004715606373109 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 61.84 0.0 0.0 6.3455 6.3455 92.853 0.0 0.0 0.0 42.17452269471728 6.094888016485811 6.094888016485811 42.93098616280687 0 0.3807196863200844 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[{I|L}P][KT]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6.3455;1.9403;1.2325 +;-;- + 199 + 1 1.38 68290.0 1.0 6324 5382 11702 HBL1_DMSO_200M_050219_1,11708 HBL1_DMSO_200M_050219_1,11708,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11709 60.399 188.0 630310.0 25 0 90812.0 + 11038 GDAHIYLNHI 10 119 576.7929797120911 1151.571406490982 2 576.7934448122978 MULTI CID FTMS 0 0 0 11702 536167.75 0.6943769904176654 -1 0.1082077026367187 7 Unmodified _GDAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 93.16586880292088 0.0091067182461363 3 [HN]E{I|L}Y{I|L}NH{I|L} 9 4 + 78.697 0.0 0.0 6.8339 6.8339 81.682 0.0 0.0 0.0 1.9494414034316776 1.9494414034316776 1.9494414034316776 1.9494414034316776 0 2.16944517631652 1.0969100130080565 0.2396518287104437 0.555462187404089 [HN]E{I|L}Y{I|L}NH{I|L};[DG]AH{I|L}Y{I|L}N{I|L}H;[HA][DG]{I|L}Y{I|L}NH{I|L};[DG]AH{I|L}Y{I|L}NH{I|L};[DG]AH{I|L}{I|L}YN{I|L}H;[DG]AH{I|L}{I|L}YNH{I|L};[HN]E{I|L}Y{I|L}GGH{I|L};[H{I|L}]DQY{I|L}NH{I|L};[H{I|L}]NEY{I|L}NH{I|L};[HA]{I|L}[DG]Y{I|L}NH{I|L} 6.8339;6.6646;6.6014;6.5434;6.3955;6.2743;6.0342;5.9527;5.8442;5.6977 -;-;-;+;-;-;-;-;-;- + 2234 1 1.38 91842.3 1.0 6325 5382 11702 HBL1_DMSO_200M_050219_1,11709 HBL1_DMSO_200M_050219_1,11709,GDAHIYLNHI True True GDAHIYLNHI 60.398992 576.793444812298 10541602.5 11702.0 ENSG00000176890|ENST00000323274|TYMS;;nc|ENSG00000176890|P04818-3|TYMS;;chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;;nc|ENSG00000176890|P04818-2|TYMS;;ENST00000581920.1_1_18:667730-672994:+|nuORF 6.521366437276204 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11710 60.401 99.0 970880.0 25 0 141950.0 + 11039 GDAHIYLNHI 10 107 384.864551839969 1151.571826120107 3 384.8643371462822 MULTI CID FTMS 0 0 0 11702 530637.6875 0.8778188140506792 -1 0.1082077026367187 8 Unmodified _GDAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 65.23502041540118 0.0228537820337083 3 [DG]AH{I|L}Y{I|L}N{I|L}H 10 2 + 84.973 0.0 0.0 7.3788 7.3788 86.643 0.0 0.0 0.0 21.249387366083 4.30124692043438 4.30124692043438 4.30124692043438 0 0.5941876774005248 1.3979400086720375 0.0 1.5044321917401078 [DG]AH{I|L}Y{I|L}N{I|L}H;[DG]AH{I|L}Y{I|L}NH{I|L};[DG]AH{I|L}Y{I|L}{I|L}NH;[DG]AH{I|L}{I|L}YN{I|L}H;[DG]AH{I|L}{I|L}YNH{I|L};[DG]AH{I|L}Y{I|L}[HQ]V;[DG]AH{I|L}{I|L}Y{I|L}NH;[DG]AH{I|L}Y{I|L}GG{I|L}H;[DG]AH{I|L}Y{I|L}GGH{I|L};[DG]AH{I|L}{I|L}Y[HQ]V 7.3788;7.0053;6.5946;6.4413;6.0677;5.8311;5.657;5.2766;4.9031;4.8935 -;+;-;-;-;-;-;-;-;- + 744 + 1 1.38 78884.3 1.0 6326 5382 11702 HBL1_DMSO_200M_050219_1,11710 HBL1_DMSO_200M_050219_1,11710,GDAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11711 60.403 93.0 684840.0 25 0 88902.0 + -1 FILANEHNV 9 97 528.7749557484037 1055.5353585636074 2 528.7783080935478 MULTI CID FTMS 0 0 0 11702 422961.59375 0.3913591469538992 -1 0.1082077026367187 9 Oxidation (M) _LFLM(Oxidation (M))LFEQ_ ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-3|IPO5;nc|ENSG00000065150|O00410-2|IPO5 38.15118350030904 0.2652218139009398 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[KC]AE 7 -1 38.503 0.0 0.0 3.6478 0.0 0.0 0.0 248.0785311334594 248.0785311334594 23.6793596545024 0.0 0.0 0.0 0 0.7742275032520141 0.8239087409443188 0.3807196863200844 0.75 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[KC]AE 3.6478 - 248 + 1 1.38 53935.9 1.0 6327 5382 11702 HBL1_DMSO_200M_050219_1,11711 HBL1_DMSO_200M_050219_1,11711,LFLMLFEQ False False FILANEHNV 60.403175 528.778308093548 12919497.0 11702.0 ENSG00000065150|ENST00000651721|IPO5;;nc|ENSG00000065150|O00410-3|IPO5;;nc|ENSG00000065150|O00410-2|IPO5 6.576103369394938 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11712 60.406 153.0 896420.0 25 0 113530.0 + 21214 LPDGRIIKV 9 127 337.5500828701165 1009.6284192105496 3 337.5498229861259 MULTI CID FTMS 0 0 0 11702 375944.3125 0.4389928176529862 6 -0.4904251098632812 10 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 30.7034409873982 0.1405282614900322 3 {I|L}PDV 4 5 35.891 0.0 0.0 3.5548 0.0 0.0 0.0 582.3732745783528 582.3732745783528 10.952205667976571 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {I|L}PDV 3.5548 - 299 + 1 1.38 120789.5 1.0 6328 5382 11702 HBL1_DMSO_200M_050219_1,11712 HBL1_DMSO_200M_050219_1,11712,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11713 60.409 126.0 564530.0 25 0 82604.0 + 26953 PEALTPPLG 9 96 447.7501709248364 893.4857889164728 2 448.2528869509697 MULTI CID FTMS 0 0 0 11702 343582.34375 0.6152453514278363 -10 0.9821815490722656 11 Unmodified _PEALTPPLG_ REV__ENST00000525402.5_1_11:67275348-67275471:-|nuORF 15.847184025352805 0.4077185912009129 3 [EP]A{I|L} 4 -1 29.922 0.0 0.0 3.3489 0.0 0.0 0.0 480.2460777527426 480.2460777527426 8.750612633917001 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [EP]A{I|L} 3.3489 + + 60 1 1.38 59762.0 1.0 6329 5382 11702 HBL1_DMSO_200M_050219_1,11713 HBL1_DMSO_200M_050219_1,11713,PEALTPPLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11714 60.411 98.0 450610.0 25 0 59885.0 39490 VARRERAV 8 79 478.7924331730613 0 478.7924682497978 PEAK CID FTMS 0 0 0 11702 319334.59375 0.9714414269333228 -1 0.1082077026367187 12 Unmodified _VARRERAV_ ENSG00000164403|ENST00000378679|SHROOM1;nc|ENSG00000164403|Q2M3G4-2|SHROOM1 14.581692164780916 0.4900557725783909 3 V{I|L}KY{M(Oxidation (M))|F} 5 7 30.573 0.0 0.0 3.1995 0.0 0.0 188.11730583555808 114.05653558902576 302.1738414245838 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V{I|L}KY{M(Oxidation (M))|F} 3.1995 - 60 + 1 1.38 38209.5 1.0 6330 5382 11702 HBL1_DMSO_200M_050219_1,11714 HBL1_DMSO_200M_050219_1,11714,VARRERAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11715 60.413 87.0 1607600.0 25 0 199320.0 + 16879 KIFHINPRL 9 116 379.9009678028356 0 379.9008666872978 PEAK CID FTMS 0 0 0 11702 273495.3125 0.7265852399050907 -1 0.1082077026367187 13 Unmodified _KIFHINPRL_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A 17.44264345198275 0.2268971914127055 3 {I|L}N 2 7 10.969 0.0 0.0 1.4475 0.0 0.0 146.4117332507737 381.22781962831937 527.6395528790931 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}N 1.4475 + + 100 + 1 1.38 115583.3 1.0 6331 5382 11702 HBL1_DMSO_200M_050219_1,11715 HBL1_DMSO_200M_050219_1,11715,KIFHINPRL False True KIFHINPRL 60.412838 379.900866687298 3674320.5 11702.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A 4.535345236460368 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11716 60.425 708.0 318050.0 25 0 29924.0 + + 2350 TVIEDKKIEL 10 174 593.8436878316429 1185.6728227300855 2 594.3477050662041 MULTI CID FTMS 0 0 0 11702 221663.8125 0.6312683709470892 -3 0.3296928405761719 14 Unmodified _AQLKLREESL_ ENSG00000196652|ENST00000326775|ZKSCAN5 15.738622578938676 0.5834632108994704 3 {[QN]|[E{I|L}]|[KN]}DKK{I|L}{M(Oxidation (M))|F}{I|L}V 9 -1 61.394 0.0 0.0 5.178 0.0 0.0 0.0 97.0145844757557 97.0145844757557 27.81332497308105 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.7571810378154735 0.0 {[QN]|[E{I|L}]|[KN]}DKK{I|L}{M(Oxidation (M))|F}{I|L}V 5.178 - 4666 1 1.38 165967.6 1.0 6332 5382 11702 HBL1_DMSO_200M_050219_1,11716 HBL1_DMSO_200M_050219_1,11716,AQLKLREESL False False TVIEDKKIEL 60.42514 594.347705066204 1731351.625 11702.0 ENSG00000196652|ENST00000326775|ZKSCAN5 4.991324583689372 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11717 60.432 370.0 519830.0 25 0 45025.0 + 38111 TPLLPLELG 9 219 318.1958053053918 0 318.1966735720634 PEAK CID FTMS 0 0 0 11702 223401.28125 1.0 0 0.0 15 Unmodified _TPLLPLELG_ REV__ENST00000478085.5_1_22:40805026-40805658:+|nuORF 2.735195868890462 0.3444685223463735 3 D 1 -1 6.9897 0.0 0.0 1.1018 0.0 0.0 119.07030826527736 397.25720669541766 516.327514960695 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 1.1018 - 4 + 1 1.38 157062.7 1.0 6333 5382 11702 HBL1_DMSO_200M_050219_1,11717 HBL1_DMSO_200M_050219_1,11717,TPLLPLELG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11718 60.446 800.0 233190.0 25 0 13629.0 + 9830 FPEEEWRHV 9 184 614.7912418782817 1227.5679308233632 2 614.7897827029228 MULTI CID FTMS 0 0 0 11702 151678.0 0.6099524869530293 6 -0.4904251098632812 16 Unmodified _FPEEEWRHV_ ENSG00000197037|ENST00000394152|ZSCAN25;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 67.83816525789305 0.0219346420158844 3 {M(Oxidation (M))|F}PEEEWRHV 9 0 + 77.448 0.0 0.0 6.309 6.309 84.6 0.0 0.0 0.0 5.131748691135428 5.131748691135428 5.131748691135428 5.131748691135428 0 1.6237125054200234 0.0 0.3807196863200844 0.7134679910804405 + + {M(Oxidation (M))|F}PEEEWRHV;[EP]R[{I|L}T]EEEPE;{M(Oxidation (M))|F}PEEEWRVH;{M(Oxidation (M))|F}PEEE{[DA]|[EG]}RHV;{M(Oxidation (M))|F}PEEE{[DA]|[EG]}RVH;{M(Oxidation (M))|F}PEEE[{I|L}T]QHV;[EP]ET[R{I|L}]EEPE;YY[R{I|L}]C(Carbamidomethyl (C))VEPE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WT]|[RM]}[HS]VEPE;[EP]R{[NV]|[RG]}C(Carbamidomethyl (C))VEPE 6.309;5.891;5.8478;5.7626;5.3013;5.2304;5.2277;5.0711;4.919;4.894 +;-;-;-;-;-;-;-;-;- + 6194 + 1 1.38 136959.6 0.9700000286102296 6334 5382 11702 HBL1_DMSO_200M_050219_1,11718 HBL1_DMSO_200M_050219_1,11718,FPEEEWRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11719 60.459 800.0 321620.0 25 0 30160.0 + 23876 LVLDVHDSI 9 225 505.7800479814291 1009.5455430296582 2 505.7803527712822 MULTI CID FTMS 0 0 0 11702 145846.953125 1.0 0 0.0 17 Unmodified _LVLDVHDSI_ REV__ENSG00000125863|ENST00000347364|MKKS 28.486842064014134 0.1687311288560894 3 {NN|[MP]|[D{I|L}]|[EV]}HD{I|L}SVV{I|L} 9 -1 + 39.417 0.0 0.0 3.9044 3.9044 74.915 0.0 0.0 0.0 14.911907569655265 12.65514875961378 12.65514875961378 3.556722796270492 0 0.1139829889124311 1.5228787452803376 0.2887254899964357 0.055462187404089 {NN|[MP]|[D{I|L}]|[EV]}HD{I|L}SVV{I|L};{NN|[MP]|[D{I|L}]|[EV]}HD{I|L}VSV{I|L};[HD]{I|L}D{I|L}SVV{I|L};[HD]{I|L}D{I|L}VSV{I|L};[HD]EV{I|L}SVV{I|L};[{I|L}P][HV]{M(Oxidation (M))|F}WV{I|L};{[TV]|[{I|L}S]}N[RD]PPV{I|L};{[TV]|[{I|L}S]}N[RD][RH]{I|L};[DP]R[QP]SVV{I|L};{[TV]|[{I|L}S]}D[RN]PPV{I|L} 3.9044;3.5521;2.4273;2.075;1.8884;1.8824;1.8773;1.8511;1.8252;1.8199 -;-;-;-;-;-;-;-;-;- 2400 1 1.38 189741.6 0.8799999952316284 6335 5382 11702 HBL1_DMSO_200M_050219_1,11719 HBL1_DMSO_200M_050219_1,11719,LVLDVHDSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11720 60.474 800.0 233780.0 25 0 15050.0 + 21306 LPEPSIRSV 9 209 499.2873259038439 996.5600988744876 2 499.2875244021416 MULTI CID FTMS 0 0 0 11702 135114.4375 0.0405195416173096 6 -0.4904251098632812 18 Unmodified _LPEPSIRSV_ ENSG00000100077|ENST00000324198|GRK3;ENSG00000173020|ENST00000308595|GRK2 43.77239144664712 0.0547478964384323 3 {I|L}PEP{[TV]|[{I|L}S]}RSV 9 0 + 60.421 0.0 0.0 6.063 6.063 81.968 0.0 0.0 0.0 36.51844498194355 2.5514629474964465 2.5514629474964465 3.650537803408668 0 0.8145152305677003 1.3979400086720375 0.5451140161145328 0.3494850021680094 + + {I|L}PEP{[TV]|[{I|L}S]}RSV;{I|L}PEPRRMV;{I|L}PEV[TP]RSV;{I|L}P[{M(Oxidation (M))|F}T]{I|L}NPPV;{I|L}P[{M(Oxidation (M))|F}T]{I|L}GGPPV;{I|L}P[{M(Oxidation (M))|F}T]{I|L}NPVP;{I|L}P[{M(Oxidation (M))|F}T]{I|L}NVPP;{I|L}P[{M(Oxidation (M))|F}T]{I|L}GGPVP;{I|L}P[C(Carbamidomethyl (C))R][RK]AP;{I|L}P[{M(Oxidation (M))|F}T]{I|L}GGVPP 6.063;5.6967;5.215;3.1301;2.2061;2.1807;1.7258;1.2567;1.2244;0.80181 +;-;-;-;-;-;-;-;-;- + 1235 + 1 1.38 140430.2 0.8500000238418579 6336 5382 11702 HBL1_DMSO_200M_050219_1,11720 HBL1_DMSO_200M_050219_1,11720,LPEPSIRSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11721 60.477 141.0 427810.0 25 0 35815.0 -1 0 102 457.2671177545216 456.2598412879216 1 457.2622253298759 MULTI CID FTMS 0 0 0 11702 136272.40625 0.1604595940495174 -10 0.9821815490722656 19 3 {[DA]|[EG]}V 3 -1 20.458 0.0 0.0 4.4838 0.0 0.0 0.0 168.10177144442517 168.10177144442517 0.2802872360024366 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {[DA]|[EG]}V 4.4838 - 36 1 1.38 52833.4 1.0 6337 5382 11702 HBL1_DMSO_200M_050219_1,11721 HBL1_DMSO_200M_050219_1,11721, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11722 60.491 800.0 136730.0 25 0 7376.0 -1 0 113 911.91336992036 1821.81218690752 2 911.9142944216728 MULTI CID FTMS 0 0 0 11702 121619.1953125 0.6109263793867494 6 -0.4904251098632812 20 3 [QP]SVTC(Carbamidomethyl (C))[C(Carbamidomethyl (C))H]VS[QP]VG 14 -1 47.361 0.0 0.0 2.5997 0.0 0.0 0.0 282.1014684839451 282.1014684839451 20.496360081059485 0.0 0.0 0.0 0 0.0 1.0 0.7742275032520141 0.4247425010840047 [QP]SVTC(Carbamidomethyl (C))[C(Carbamidomethyl (C))H]VS[QP]VG 2.5997 - 3053 1 1.38 77957.0 0.6299999952316284 6338 5382 11702 HBL1_DMSO_200M_050219_1,11722 HBL1_DMSO_200M_050219_1,11722, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11724 60.502 421.0 216380.0 25 0 43812.0 + -1 SQPSSSTMISV 11 54 1123.4611095958624 3367.361499387788 3 1123.794848620892 MULTI CID FTMS 0 0 0 11723 377957.0625 0.0474645449488502 5 -0.3836326599121094 1 ENSG00000120278|ENST00000696526|PLEKHG1 3 YC(Carbamidomethyl (C))Y{[CT]|[{M(Oxidation (M))|F}G]}P 6 -1 15.406 0.0 0.0 0.45751 0.0 0.0 1457.5288100340747 1119.5031221979127 2577.0319322319874 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YC(Carbamidomethyl (C))Y{[CT]|[{M(Oxidation (M))|F}G]}P 0.45751 - 128 + 1 1.383 81871.1 1.0 6339 5383 11723 HBL1_DMSO_200M_050219_1,11724 HBL1_DMSO_200M_050219_1,11724, False False SQPSSSTMISV 60.502135 1123.79484862089 299879.53125 11723.0 ENSG00000120278|ENST00000696526|PLEKHG1 1.6469566027323406 1.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11725 60.503 21.0 1687100.0 25 0 239300.0 + 23222 LSSSQLVSL 9 57 467.2664156794811 932.5182784257622 2 467.2661620974541 MULTI CID FTMS 0 0 0 11723 2595520.0 1.0 0 0.0 2 Unmodified _LSSSQLVSL_ ENST00000550528.5_1_12:58133675-58140075:+|nuORF 29.081581746732265 0.1611639662936252 3 {[TV]|[{I|L}S]}[NS]T{I|L}VS{I|L} 9 2 + 38.011 0.0 0.0 4.0761 4.0761 78.107 0.0 0.0 0.0 6.020599913279629 8.824995917031949 6.020599913279629 6.020599913279629 0 0.8182503180159344 1.5228787452803376 0.9247425010840048 0.0 {[TV]|[{I|L}S]}[NS]T{I|L}VS{I|L};[VS]{[QS]|[NT]}T{I|L}VS{I|L};{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}{[QS]|[NT]}VS{I|L};{[TV]|[{I|L}S]}[KT]{[DA]|[EG]}VS{I|L};[VS][{I|L}T]{[QS]|[NT]}VS{I|L};{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}K{[DA]|[EG]}S{I|L};{[TV]|[{I|L}S]}[KT]V{[DA]|[EG]}S{I|L};[VS][{I|L}T]K{[DA]|[EG]}S{I|L} 4.0761;3.4305;2.6865;2.2598;2.0409;1.7194;1.2926;1.0737 -;-;-;-;-;-;-;- 189 1 1.383 38602.7 1.0 6340 5383 11723 HBL1_DMSO_200M_050219_1,11725 HBL1_DMSO_200M_050219_1,11725,LSSSQLVSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11726 60.504 34.0 1292500.0 25 0 206120.0 -1 EQDCKMMF 8 65 552.7093298125568 1103.4041066919135 2 552.7100097537041 MULTI CID FTMS 0 0 0 11723 1462989.75 0.515924565869182 -1 0.1067924499511718 3 Carbamidomethyl (C),Oxidation (M) _EQDC(Carbamidomethyl (C))KM(Oxidation (M))MF_ ENSG00000271079|ENST00000420911|CTAGE15;ENSG00000271321|ENST00000470691|CTAGE6 12.531546534597751 0.7257836412119636 3 {NN|[MP]|[D{I|L}]|[EV]}QSQ 5 -1 26.031 0.0 0.0 2.3591 0.0 0.0 0.0 529.1257418268186 529.1257418268186 12.535918783769096 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}QSQ 2.3591 - 31 + 1 1.383 41557.4 1.0 6341 5383 11723 HBL1_DMSO_200M_050219_1,11726 HBL1_DMSO_200M_050219_1,11726,EQDCKMMF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11727 60.506 37.0 940460.0 25 0 73935.0 -1 IPVMCYMGVV 10 72 600.7744676227375 1199.5343823122748 2 600.7750732302666 MULTI CID FTMS 0 0 0 11723 1164275.25 0.5420603269680745 -1 0.1067924499511718 4 Carbamidomethyl (C),2 Oxidation (M) _IPVM(Oxidation (M))C(Carbamidomethyl (C))YM(Oxidation (M))GVV_ ENST00000486362.1_1_9:124584274-124585120:-|nuORF 18.13498045792455 0.5432546531930572 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]P{M(Oxidation (M))|F}VV 10 -1 + 35.596 0.0 0.0 2.9675 2.9675 50.151 0.0 0.0 0.0 3.925449767853309 15.472287753157511 3.925449767853309 0.0 0 0.2742275032520141 1.3979400086720375 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]P{M(Oxidation (M))|F}VV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{M(Oxidation (M))|F}PVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]PV{M(Oxidation (M))|F}V 2.9675;2.9675;2.3411 -;-;- 63 1 1.383 31406.1 1.0 6342 5383 11723 HBL1_DMSO_200M_050219_1,11727 HBL1_DMSO_200M_050219_1,11727,IPVMCYMGVV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11728 60.507 74.0 553630.0 25 0 34516.0 + 43163 VYQTYVNAM 9 87 544.7582346892324 1087.501916445265 2 544.7589599490166 MULTI CID FTMS 0 0 0 11723 634518.0625 0.451602225919237 -2 0.2150001525878906 5 Unmodified _VYQTYVNAM_ ENSG00000119203|ENST00000238112|CPSF3 42.09456458481378 0.0639583784996157 3 [YV]QT 4 5 29.019 0.0 0.0 2.6684 0.0 0.0 0.0 593.2402031486428 593.2402031486428 10.346543964172271 0.0 0.0 0.0 0 0.0 2.0 0.5 0.3807196863200844 + [YV]QT 2.6684 + + 399 1 1.383 39245.8 1.0 6343 5383 11723 HBL1_DMSO_200M_050219_1,11728 HBL1_DMSO_200M_050219_1,11728,VYQTYVNAM True True VYQTYVNAM 60.507402 544.758959949017 23138500.0 11723.0 ENSG00000119203|ENST00000238112|CPSF3 6.725697994232178 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11729 60.509 97.0 320250.0 25 0 43954.0 -1 0 74 562.2872851909639 2245.120034897456 4 562.2892333865166 MULTI CID FTMS 0 0 0 11723 465378.15625 1.0 0 0.0 6 3 {M(Oxidation (M))|F} 1 -1 16.99 0.0 0.0 0.75674 0.0 0.0 2080.0406414421805 0.0 2080.0406414421805 0.0 -4.436974992327123 -4.436974992327123 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.75674 - 21 + 1 1.383 38038.1 1.0 6344 5383 11723 HBL1_DMSO_200M_050219_1,11729 HBL1_DMSO_200M_050219_1,11729, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11730 60.512 145.0 817780.0 25 0 104670.0 + -1 PKGPMPKV 8 127 435.2511139900161 868.4876750468321 2 435.2509338259697 MULTI CID FTMS 0 0 0 11723 423083.40625 0.366892491232467 -9 0.8899803161621094 7 Oxidation (M) _PKGPM(Oxidation (M))PKV_ REV__ENSG00000154305|ENST00000344922|MIA3;REV__nc|ENSG00000154305|Q5JRA6-2|MIA3;REV__nc|ENSG00000154305|Q5JRA6-4|MIA3 4.75600775471527 0.7954636275367004 3 V 1 -1 10.181 0.0 0.0 1.1723 0.0 0.0 751.4080908566939 0.0 751.4080908566939 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1723 + + 34 + 1 1.383 94112.9 1.0 6345 5383 11723 HBL1_DMSO_200M_050219_1,11730 HBL1_DMSO_200M_050219_1,11730,PKGPMPKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11731 60.515 117.0 822070.0 25 0 157350.0 + 36958 TFASRVSSL 9 105 484.2649797018826 966.5154064705652 2 484.2644225955009 MULTI CID FTMS 0 0 0 11723 429750.1875 0.1002747579669398 -4 0.4364852905273437 8 Unmodified _TFASRVSSL_ ENSG00000158195|ENST00000618852|WASF2;nc|ENSG00000158195|Q9Y6W5-2|WASF2 31.26834338654808 0.1333407332142048 3 SAET 4 8 27.92 0.0 0.0 2.8887 0.0 0.0 560.3267689435562 0.0 560.3267689435562 0.0 13.315468932362576 0.0 0.0 0 1.1237125054200234 0.0 0.3494850021680094 0.0 SAET 2.8887 - 178 1 1.383 77941.5 1.0 6346 5383 11723 HBL1_DMSO_200M_050219_1,11731 HBL1_DMSO_200M_050219_1,11731,TFASRVSSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11732 60.518 149.0 660570.0 25 0 99889.0 + 27779 PLPPPPLPA 9 100 449.7730721368604 897.5315913405208 2 449.7726318240166 MULTI CID FTMS 0 0 0 11723 399707.59375 0.2179669751133422 -9 0.8899803161621094 9 Unmodified _PLPPPPLPA_ ENSG00000100379|ENST00000403888|KCTD17 67.41302359171755 0.0220989861905124 3 [{I|L}P]PPPP{I|L}PA 9 0 + 71.137 0.0 0.0 7.9258 7.9258 96.39 0.0 0.0 0.0 10.770374042991053 57.58024070117017 10.770374042991053 25.22878745280337 0 1.7034021960761263 2.0 0.0 0.0 + + [{I|L}P]PPPP{I|L}PA;{[HG]|PP}{I|L}PPP{I|L}PA;[VS]{I|L}P{I|L}[RD]V;[{I|L}P][YK]P{I|L}PA;[YK]{I|L}PP{I|L}PA;[VS]{I|L}P{I|L}[W{I|L}]A;{[HG]|PP}P{I|L}PP{I|L}PA;[{I|L}P]P[YK]{I|L}PA;[VS]{I|L}P{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[YK]P{I|L}P{I|L}PA 7.9258;5.1149;5.0012;4.9231;4.9217;4.805;4.5293;4.5038;4.1988;3.9169 +;-;-;-;-;-;-;-;-;- + 253 1 1.383 80321.1 1.0 6347 5383 11723 HBL1_DMSO_200M_050219_1,11732 HBL1_DMSO_200M_050219_1,11732,PLPPPPLPA True False PLPPPPLPA 60.517798 449.7735 0.0 11723.0 ENSG00000100379|ENST00000403888|KCTD17 0.8667115569114685 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11733 60.524 333.0 873560.0 25 0 94262.0 + -1 PCGEDEPSL 9 211 502.2052947218312 1002.3960365104624 2 502.2040588259697 MULTI CID FTMS 0 0 0 11723 298558.0625 0.997257240869491 -1 0.1067924499511718 10 Carbamidomethyl (C) _PC(Carbamidomethyl (C))GEDEPSL_ REV__ENSG00000205744|ENST00000381480|DENND1C;REV__ENST00000591795.1_1_19:6468199-6468442:-|nuORF;REV__nc|ENSG00000205744|Q8IV53-2|DENND1C 34.10243960390752 0.1078313939113124 3 {I|L}SGD{M(Oxidation (M))|F} 5 -1 57.708 0.0 0.0 5.757 0.0 0.0 0.0 480.1665438287719 480.1665438287719 29.51061368551672 0.0 0.0 0.0 0 0.4802046884880938 1.0457574905606752 0.75 0.0 {I|L}SGD{M(Oxidation (M))|F} 5.757 - 1548 + 1 1.383 221646.6 1.0 6348 5383 11723 HBL1_DMSO_200M_050219_1,11733 HBL1_DMSO_200M_050219_1,11733,PCGEDEPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11734 60.529 291.0 601040.0 25 0 61667.0 + 4890 DGHPVVVNI 9 173 475.2584487669071 948.5023446006142 2 475.2579223513603 MULTI CID FTMS 0 0 0 11723 284966.0625 0.5621524619446195 -1 0.1067924499511718 11 Unmodified _DGHPVVVNI_ ENSG00000105135|ENST00000263383|ILVBL 34.40172386719151 0.1061884637610825 3 PVVVN{I|L} 6 3 52.79 0.0 0.0 5.5657 0.0 0.0 309.1077048956657 0.0 309.1077048956657 0.0 33.03682940942381 0.0 0.0 0 1.1643943297944483 0.0 0.0 0.0 + PVVVN{I|L} 5.5657 + + 1114 1 1.383 134326.4 1.0 6349 5383 11723 HBL1_DMSO_200M_050219_1,11734 HBL1_DMSO_200M_050219_1,11734,DGHPVVVNI True True DGHPVVVNI 60.529144 475.25792235136 7241983.0 11723.0 ENSG00000105135|ENST00000263383|ILVBL 6.665026823679606 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11735 60.532 170.0 794160.0 25 0 60695.0 + 3634 DADYARLV 8 138 461.7342299032477 921.4539068732952 2 461.7350952029228 MULTI CID FTMS 0 0 0 11723 262397.46875 1.0 0 0.0 12 Unmodified _DADYARLV_ ENSG00000148606|ENST00000372371|POLR3A 42.09456458481378 0.1992492688217789 3 {[DA]|[EG]}DYAR{I|L}V 8 0 + 59.322 0.0 0.0 6.4378 6.4378 82.108 0.0 0.0 0.0 18.987183265114936 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.9247425010840048 2.0 0.0 0.0 + + {[DA]|[EG]}DYAR{I|L}V;{[DA]|[EG]}DYARV{I|L};{[DA]|[EG]}DYA{[VA]|[{I|L}G]}VV;{[DA]|[EG]}DY[Q{I|L}]VV;{[DA]|[EG]}DYA[VG]{I|L}V;{[DA]|[EG]}DYA[VG]V{I|L};{[DA]|[EG]}DYA[{I|L}V]GV;{[DA]|[EG]}DV[YQ]{I|L}V;{[DA]|[EG]}DV[YQ]V{I|L};{[DA]|[EG]}[WY]R{I|L}V 6.4378;6.1111;5.5683;5.5186;5.4327;5.106;4.8257;4.3474;4.0207;3.4914 +;-;-;-;-;-;-;-;-;- + 759 + 1 1.383 108961.9 1.0 6350 5383 11723 HBL1_DMSO_200M_050219_1,11735 HBL1_DMSO_200M_050219_1,11735,DADYARLV False True DADYARLV 60.532464 461.735095202923 1795318.5 11723.0 ENSG00000148606|ENST00000372371|POLR3A 5.9688825607299805 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11736 60.546 758.0 269310.0 25 0 12072.0 -1 0 141 749.3830794445635 2245.1274089338904 3 749.3824340701103 MULTI CID FTMS 0 0 0 11723 206900.734375 1.0 0 0.0 13 3 [{M(Oxidation (M))|F}V]EKKDK{[QD]|[EN]|[WG]|[KD]|[RS]}DQK{I|L}C{M(Oxidation (M))|F}VE{M(Oxidation (M))|F} 18 -1 + 127.31 0.0 0.0 5.6703 5.6703 57.938 0.0 0.0 0.0 0.4402281476392033 0.4402281476392033 0.4402281476392033 0.0 0 3.4035984316004217 0.9208187539523752 1.5356668758921828 0.4247425010840047 [{M(Oxidation (M))|F}V]EKKDK{[QD]|[EN]|[WG]|[KD]|[RS]}DQK{I|L}C{M(Oxidation (M))|F}VE{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]EKKDK{[QD]|[EN]|[WG]|[KD]|[RS]}DKK{I|L}C{M(Oxidation (M))|F}VE{M(Oxidation (M))|F};V{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}C{I|L}KQD{[QD]|[EN]|[WG]|[KD]|[RS]}KRP[KA]E{M(Oxidation (M))|F};V{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}C{I|L}KKD{[QD]|[EN]|[WG]|[KD]|[RS]}KRP[KA]E{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]EKKDK{[QD]|[EN]|[WG]|[KD]|[RS]}DKK{I|L}D{M(Oxidation (M))|F}SE{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]EKKDK{[QD]|[EN]|[WG]|[KD]|[RS]}DQK{I|L}D{M(Oxidation (M))|F}SE{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]EKKDK{[QD]|[EN]|[WG]|[KD]|[RS]}DKK{I|L}YVSE{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]EKKDK{[QD]|[EN]|[WG]|[KD]|[RS]}DQK{I|L}YVSE{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]EKKDK{[QD]|[EN]|[WG]|[KD]|[RS]}DKK{I|L}CE{M(Oxidation (M))|F}V{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]EKKDK{[QD]|[EN]|[WG]|[KD]|[RS]}DQK{I|L}CE{M(Oxidation (M))|F}V{M(Oxidation (M))|F} 5.6703;5.6703;5.6507;5.6507;5.6174;5.6174;5.539;5.539;5.4996;5.4996 -;-;-;-;-;-;-;-;-;- 83121 1 1.383 150453.1 1.0 6351 5383 11723 HBL1_DMSO_200M_050219_1,11736 HBL1_DMSO_200M_050219_1,11736, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11737 60.559 800.0 172410.0 25 0 8574.7 + -1 EVEECEDEM 9 200 564.6884286753894 1127.3623044175788 2 564.6882202029228 MULTI CID FTMS 0 0 0 11723 197143.9375 0.3658947616535973 -2 0.2150001525878906 14 Oxidation (M) _EVEECEDEM(Oxidation (M))_ REV__ENSG00000119285|ENST00000366582|HEATR1 7.289230182591677 0.6602208344931196 3 VE 2 -1 29.297 0.0 0.0 2.5987 0.0 0.0 0.0 896.2342623346311 896.2342623346311 12.064856298445576 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 VE 2.5987 + + 367 + 1 1.383 109060.5 0.9900000095367432 6352 5383 11723 HBL1_DMSO_200M_050219_1,11737 HBL1_DMSO_200M_050219_1,11737,EVEECEDEM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11738 60.573 800.0 314820.0 25 0 72012.0 + 37703 TLPETLDPA 9 104 956.492223890392 955.484947423792 1 956.4945556521416 MULTI CID FTMS 0 0 0 11723 178039.046875 0.4664156930177673 -4 0.4364852905273437 15 Unmodified _TLPETLDPA_ ENSG00000065518|ENST00000184266|NDUFB4;nc|ENSG00000065518|O95168-2|NDUFB4 92.8221339359638 0.0138398038803217 3 [EP]T{I|L}T{I|L}D[PA] 9 4 + 69.98 0.0 0.0 7.324 7.324 89.745 0.0 0.0 0.0 11.583624920952497 5.642492736872597 5.642492736872597 7.631492287727454 0 1.0387254899964358 1.3979400086720375 1.9291746928241125 0.0 [EP]T{I|L}T{I|L}D[PA];[EP]T{I|L}D{I|L}T[PA];[EP]T{I|L}TAE[VP];[EP]{I|L}TT{I|L}D[PA];[EP]T{I|L}D[VS][VP];[{I|L}T]EPT{I|L}D[PA];[EP]{I|L}TD{I|L}T[PA];[{I|L}T]EPD{I|L}T[PA];[EP]T{I|L}D[VP][VS];[TP]E{I|L}T{I|L}D[PA] 7.324;6.5253;6.2636;6.1438;6.1396;6.1117;5.3451;5.313;5.2823;5.2308 -;-;-;-;-;-;-;-;-;- 3642 1 1.383 165847.1 1.0 6353 5383 11723 HBL1_DMSO_200M_050219_1,11738 HBL1_DMSO_200M_050219_1,11738,TLPETLDPA True True TLPETLDPA 60.573287 956.494555652142 7943729.5 11723.0 ENSG00000065518|ENST00000184266|NDUFB4;;nc|ENSG00000065518|O95168-2|NDUFB4 3.504772345225016 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11739 60.589 800.0 260040.0 25 0 22341.0 + 21216 TVLDDVGHGV 10 197 505.8220977403943 1009.6296425475888 2 505.8215820193291 MULTI CID FTMS 0 0 0 11723 156502.703125 1.0 0 0.0 16 Unmodified _LPDGRIIKV_ nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;ENST00000473481.1_1_10:27065936-27112150:-|nuORF;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;ENSG00000136754|ENST00000376140|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1 24.881564428377168 0.2146028316269493 3 {I|L}V[KG]PERV{I|L} 9 7 + 33.202 0.0 0.0 3.2885 3.2885 70.484 0.0 0.0 0.0 8.827708986040385 1.760912590556817 1.760912590556817 1.760912590556817 0 0.6435078169319297 1.5228787452803376 0.4247425010840047 0.0 {I|L}V[KG]PERV{I|L};{I|L}V[KG]PER{I|L}V;{I|L}P[RK]ERV{I|L};{I|L}P[RK]ER{I|L}V;{I|L}V[KG]P[R{I|L}]D{I|L};{I|L}V[KG]PVWV{I|L};{I|L}V[KG]P[R{I|L}]EV;{I|L}V[KG]PVW{I|L}V;{I|L}V[KG]P[RN]KV;{I|L}V[KG]PV[NG]KV 3.2885;3.1141;2.6139;2.4395;2.4222;2.3952;2.2478;2.2208;2.0982;1.9745 -;-;-;-;-;-;-;-;-;- 1665 + 1 1.383 155555.7 0.800000011920929 6354 5383 11723 HBL1_DMSO_200M_050219_1,11739 HBL1_DMSO_200M_050219_1,11739,LPDGRIIKV False False TVLDDVGHGV 60.588568 505.821582019329 3020856.75 11723.0 nc|ENSG00000136754|Q8IZP0-6|ABI1;;nc|ENSG00000136754|Q8IZP0-3|ABI1;;nc|ENSG00000136754|Q8IZP0-5|ABI1;;ENST00000473481.1_1_10:27065936-27112150:-|nuORF;;nc|ENSG00000136754|Q8IZP0-8|ABI1;;nc|ENSG00000136754|Q8IZP0-7|ABI1;;ENSG00000136754|ENST00000376140|ABI1;;nc|ENSG00000136754|Q8IZP0|ABI1;;nc|ENSG00000136754|Q8IZP0-10|ABI1;;nc|ENSG00000136754|Q8IZP0-4|ABI1;;nc|ENSG00000136754|Q8IZP0-2|ABI1;;nc|ENSG00000136754|Q8IZP0-12|ABI1 6.588823954264323 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11740 60.602 800.0 291570.0 25 0 26989.0 + 39060 TVVLGQPKV 9 214 470.7951453613077 939.5757377894154 2 470.7949401736259 MULTI CID FTMS 0 0 0 11723 122340.546875 0.6908588597512737 3 -0.2617645263671875 17 Unmodified _TVVLGQPKV_ REV__ENSG00000126705|ENST00000673934|AHDC1 42.09456458481378 0.0639583784996157 3 {[TV]|[{I|L}S]}V 3 -1 34.705 0.0 0.0 3.6937 0.0 0.0 0.0 637.3682887306139 637.3682887306139 20.257856031950105 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}V 3.6937 + + 1349 + 1 1.383 175533.3 0.6800000071525574 6355 5383 11723 HBL1_DMSO_200M_050219_1,11740 HBL1_DMSO_200M_050219_1,11740,TVVLGQPKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11741 60.616 800.0 108680.0 25 0 8181.9 + 16995 KIYEGAYHVL 10 134 596.8215459244769 1191.6285389157538 2 596.8207275271416 MULTI CID FTMS 0 0 0 11723 119778.4375 1.0 0 0.0 18 Unmodified _KIYEGAYHVL_ ENSG00000074416|ENST00000265052|MGLL;nc|ENSG00000074416|Q99685-2|MGLL;nc|ENSG00000074416|Q99685|MGLL 18.721224879955976 0.5334180411911432 3 K{I|L}WW{I|L}TQ 7 8 37.537 0.0 0.0 3.15 0.0 0.0 0.0 233.10463892154533 233.10463892154533 13.099760860832426 0.0 0.0 0.0 0 0.7887254899964358 0.619788758288394 0.5994850021680094 0.2887254899964357 K{I|L}WW{I|L}TQ 3.15 - 771 + 1 1.383 69103.5 0.75 6356 5383 11723 HBL1_DMSO_200M_050219_1,11741 HBL1_DMSO_200M_050219_1,11741,KIYEGAYHVL False True KIYEGAYHVL 60.616214 596.820727527142 1018179.8125 11723.0 ENSG00000074416|ENST00000265052|MGLL;;nc|ENSG00000074416|Q99685-2|MGLL;;nc|ENSG00000074416|Q99685|MGLL 0.5633359750111898 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11742 60.631 800.0 38516.0 25 0 10119.0 -1 0 45 1041.8951725684162 2081.7757922036326 2 1041.896655261517 MULTI CID FTMS 0 0 0 11723 105163.78125 1.0 0 0.0 19 3 [YQ]{I|L}D 4 -1 17.619 0.0 0.0 0.84637 0.0 0.0 0.0 1559.5213115730264 1559.5213115730264 2.04628427264403 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [YQ]{I|L}D 0.84637 - 132 1 1.383 35816.7 0.5400000214576721 6357 5383 11723 HBL1_DMSO_200M_050219_1,11742 HBL1_DMSO_200M_050219_1,11742, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11743 60.645 800.0 154810.0 25 0 7058.1 13565 HPGRGGGG 8 148 694.3405785570836 693.3333020904836 1 694.3582031130791 MULTI CID FTMS 0 0 0 -1 0 20 Unmodified _HPGRGGGG_ ENST00000409223.1_1_2:239053546-239056508:+|nuORF 0.0 0.8243325171867699 3 [DP]PAS{I|L} 6 7 33.242 0.0 0.0 4.7945 0.0 0.0 0.0 110.02393101426996 110.02393101426996 2.7839080836483703 0.0 0.0 0.0 0 0.0 0.6575773191777937 1.4876954943324543 0.0 [DP]PAS{I|L} 4.7945 - 689 1 1.383 90636.1 0.8600000143051147 6358 5383 11723 HBL1_DMSO_200M_050219_1,11743 HBL1_DMSO_200M_050219_1,11743,HPGRGGGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11745 60.649 16.0 2795300.0 25 0 333000.0 + 23003 LSHLHDLAL 9 81 509.78739779112425 1017.5602426490484 2 509.7877990603447 MULTI CID FTMS 0 0 0 11744 2408446.5 0.276186907635588 4 -0.2297210693359375 1 Unmodified _LSHLHDLAL_ REV__ENSG00000071242|ENST00000265678|RPS6KA2;REV__ENSG00000177189|ENST00000379565|RPS6KA3;REV__nc|ENSG00000071242|Q15349-2|RPS6KA2;REV__nc|ENSG00000071242|Q15349-3|RPS6KA2 28.486842064014134 0.1687311288560894 3 {I|L}P[NP]{I|L}[HQ]S{I|L} 9 -1 + 38.905 0.0 0.0 3.8234 3.8234 52.098 0.0 0.0 0.0 17.99027907382279 10.673519341391083 10.673519341391083 0.0 0 0.4247425010840047 0.8860566476931632 0.4247425010840047 0.0 {I|L}P[NP]{I|L}[HQ]S{I|L};{I|L}P[NP]{I|L}N[HT]{I|L};{I|L}P[NP]{I|L}[HQ]TV 3.8234;3.8234;2.3826 -;-;- 167 + 1 1.384 41191.0 1.0 6359 5384 11744 HBL1_DMSO_200M_050219_1,11745 HBL1_DMSO_200M_050219_1,11745,LSHLHDLAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11746 60.651 18.0 2255300.0 25 0 163990.0 + 22112 LPPPVQTQI 9 86 496.7924844808842 991.5704160285684 2 496.7924377322197 MULTI CID FTMS 0 0 0 11744 2685476.25 0.3723253996103824 6 -0.3288192749023437 2 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 67.34385681178166 0.0221257235307089 3 [{I|L}P]PPVQTQ{I|L} 9 0 + 60.301 0.0 0.0 6.0813 6.0813 80.93 0.0 0.0 0.0 17.659167939666318 6.1535656654828585 6.1535656654828585 3.0102999566398125 0 0.841129063296272 1.6989700043360187 0.3807196863200844 0.0 + + [{I|L}P]PPVQTQ{I|L};[{I|L}P]PPN{I|L}TQ{I|L};[{I|L}P]PNP{I|L}TQ{I|L};[{I|L}P]PPVQD{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]NPP{I|L}TQ{I|L};[{I|L}P]PPN{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPV[AG]TQ{I|L};[{I|L}P]PNP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPGG{I|L}TQ{I|L};[{I|L}P]PPNT{I|L}Q{I|L} 6.0813;5.7777;5.6001;5.4607;5.3764;5.1571;5.1527;4.9796;4.8491;4.7648 +;-;-;-;-;-;-;-;-;- + 895 1 1.384 37123.1 1.0 6360 5384 11744 HBL1_DMSO_200M_050219_1,11746 HBL1_DMSO_200M_050219_1,11746,LPPPVQTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11747 60.652 15.0 4099700.0 25 0 946020.0 + + -1 RVIEPFSRV 9 67 551.821992651377 1101.6294323695538 2 551.8222534060478 MULTI CID FTMS 0 0 0 11744 2957925.0 1.0 0 0.0 3 Oxidation (M) _VRELVLAM(Oxidation (M))R_ ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11;ENST00000493026.2_1_17:30804487-30806484:+|nuORF 17.11289562659939 0.3734572693229295 3 VGV{I|L}EV 6 -1 36.208 0.0 0.0 3.2868 0.0 0.0 0.0 502.2417696588501 502.2417696588501 24.94874841344272 0.0 0.0 0.0 0 1.1822333069283657 0.0 0.5 0.0 VGV{I|L}EV 3.2868 - 38 + 1 1.384 55096.3 1.0 6361 5384 11744 HBL1_DMSO_200M_050219_1,11747 HBL1_DMSO_200M_050219_1,11747,VRELVLAMR False False RVIEPFSRV 60.651778 551.822253406048 20591344.0 11744.0 ENSG00000108671|ENST00000261712|PSMD11;;nc|ENSG00000108671|O00231-2|PSMD11;;ENST00000493026.2_1_17:30804487-30806484:+|nuORF 4.912779251734416 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11748 60.653 31.0 1581600.0 25 0 210020.0 + 27308 PHNQFIKMM 9 90 382.52445418491845 1144.5515331549557 3 382.5245544314384 MULTI CID FTMS 0 0 0 11744 1621608.25 0.9910059153878614 1 -0.0579719543457031 4 Unmodified _PHNQFIKMM_ ENSG00000162511|ENST00000294507|LAPTM5 36.04419817259434 0.0971720506436186 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L} 6 5 27.88 0.0 0.0 2.4359 0.0 0.0 0.0 405.16203841014107 405.16203841014107 9.024174299985004 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L} 2.4359 - 314 1 1.384 44909.9 1.0 6362 5384 11744 HBL1_DMSO_200M_050219_1,11748 HBL1_DMSO_200M_050219_1,11748,PHNQFIKMM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11749 60.654 47.0 1055800.0 25 0 72747.0 + 31049 RLIEESVTV 9 84 523.2979499509659 1044.5813469687316 2 523.2984496951103 MULTI CID FTMS 0 0 0 11744 1108415.375 0.3281622856049956 1 -0.0579719543457031 5 Unmodified _RLIEESVTV_ ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769-3|NUP160;nc|ENSG00000030066|Q12769|NUP160 34.221707139014875 0.1071766711162635 3 EESVTV 6 3 47.401 0.0 0.0 4.5378 0.0 0.0 382.2687855451188 0.0 382.2687855451188 0.0 29.24024714504206 0.0 0.0 0 0.8807196863200843 0.0 0.8494850021680094 0.0 + EESVTV 4.5378 + + 91 1 1.384 49240.9 1.0 6363 5384 11744 HBL1_DMSO_200M_050219_1,11749 HBL1_DMSO_200M_050219_1,11749,RLIEESVTV True True RLIEESVTV 60.654245 523.29844969511 48047624.0 11744.0 nc|ENSG00000030066|Q12769|NUP160;;nc|ENSG00000030066|Q12769-3|NUP160;;ENSG00000030066|ENST00000378460|NUP160 5.424044132232666 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11750 60.656 47.0 2271100.0 25 0 272150.0 + 15499 IPTKDVPIV 9 112 491.3023521134498 980.5901512936996 2 491.3026000857353 MULTI CID FTMS 0 0 0 11744 979460.6875 0.2770454364973715 -13 1.395427703857422 6 Unmodified _IPTKDVPIV_ ENSG00000159023|ENST00000343067|EPB41;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41 51.629811660486645 0.0367964933207742 3 [{I|L}P]TA{[SA]|[TG]}{I|L}P{I|L}V 10 4 + 45.045 0.0 0.0 4.5936 4.5936 75.174 0.0 0.0 0.0 7.1919646325935815 23.53044812934229 7.1919646325935815 2.570071809000609 0 1.048455006504028 2.0 0.5228787452803376 0.0 [{I|L}P]TA{[SA]|[TG]}{I|L}P{I|L}V;[{I|L}P]TA[TA]VP{I|L}V;[{I|L}P]TA{[SA]|[TG]}P{I|L}{I|L}V;[{I|L}P]AA{[MG]|[TS]}{I|L}P{I|L}V;[{I|L}P]AA{[MG]|[TS]}P{I|L}{I|L}V;[{I|L}P]TA{[VA]|[{I|L}G]}TP{I|L}V;[{I|L}P]TA[TA]PV{I|L}V;[TP]A[TA]V{I|L}P{I|L}V;{I|L}{[QN]|[E{I|L}]|[KN]}{I|L}{[QG]|[NA]}P{I|L}V;[{I|L}P]TA[PG]T{I|L}{I|L}V 4.5936;4.3316;4.3037;4.0838;3.7938;3.7722;3.7346;3.6058;3.5914;3.5505 -;-;-;-;-;-;-;-;-;- 843 1 1.384 85793.1 1.0 6364 5384 11744 HBL1_DMSO_200M_050219_1,11750 HBL1_DMSO_200M_050219_1,11750,IPTKDVPIV True True IPTKDVPIV 60.655503 491.302600085735 10506839.0 11744.0 nc|ENSG00000159023|P11171-5|EPB41;;nc|ENSG00000159023|P11171-2|EPB41;;ENSG00000159023|ENST00000343067|EPB41;;nc|ENSG00000159023|P11171-3|EPB41;;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;;nc|ENSG00000159023|P11171-4|EPB41;;nc|ENSG00000159023|P11171-6|EPB41 1.6521754662195842 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11751 60.657 63.0 1588700.0 25 0 265710.0 + 44639 YPFKPPKV 8 80 325.86048683472575 974.5596311043772 3 325.8600952029228 MULTI CID FTMS 0 0 0 11744 825299.75 0.0106997727389881 17 -1.3212203979492188 7 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 15.847184025352805 0.6768015514314958 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 46.962 0.0 0.0 4.8188 4.8188 87.383 0.0 0.0 0.0 14.108698927507 5.538588578747365 5.538588578747365 32.347786336950186 0 0.0 0.8860566476931632 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;Y[{I|L}T]KPP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T]K[HS]KV 4.8188;1.4996;1.4001;0.91056;0.67937 +;-;-;-;- + 198 + 1 1.384 86921.3 1.0 6365 5384 11744 HBL1_DMSO_200M_050219_1,11751 HBL1_DMSO_200M_050219_1,11751,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11752 60.658 57.0 812500.0 25 0 89046.0 + 7398 EGILLPQL 8 76 441.7680744852922 881.5215960373844 2 441.7682678103447 MULTI CID FTMS 0 0 0 11744 813389.0625 0.4345687195403949 -8 0.8347892761230469 8 Unmodified _EGILLPQL_ REV__ENSG00000221968|ENST00000278829|FADS3;REV__ENST00000414624.6_1_11:61645294-61658904:-|nuORF 18.13498045792455 0.6430038125133779 3 VPC{I|L}V[RP]V 8 -1 + 55.571 0.0 0.0 6.304 6.304 92.995 0.0 0.0 0.0 26.18562527100117 0.2659315044064669 0.2659315044064669 55.57110048012923 0 0.4247425010840047 2.0 0.0 0.0 VPC{I|L}V[RP]V 6.304 - 238 + 1 1.384 42080.4 1.0 6366 5384 11744 HBL1_DMSO_200M_050219_1,11752 HBL1_DMSO_200M_050219_1,11752,EGILLPQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11753 60.66 48.0 692260.0 25 0 67961.0 + 6049 DSFEFKAHV 9 71 540.2609309213149 1078.5073089094296 2 540.2615844607353 MULTI CID FTMS 0 0 0 11744 793825.5 0.3334393587148085 1 -0.0579719543457031 9 Unmodified _DSFEFKAHV_ ENSG00000101596|ENST00000320876|SMCHD1;nc|ENSG00000101596|A6NHR9-2|SMCHD1 47.594388314883695 0.0456443387682827 3 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV 9 0 + 42.846 0.0 0.0 3.9727 3.9727 84.388 0.0 0.0 0.0 38.24207843581476 10.457574905606748 10.457574905606748 23.69911285071793 0 0.3807196863200844 0.0 0.4247425010840047 0.0 + + {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[YK][PS]HV 3.9727;1.7753 +;- + 68 + 1 1.384 30871.2 1.0 6367 5384 11744 HBL1_DMSO_200M_050219_1,11753 HBL1_DMSO_200M_050219_1,11753,DSFEFKAHV True True DSFEFKAHV 60.659767 540.261584460735 44108798.5 11744.0 ENSG00000101596|ENST00000320876|SMCHD1;;nc|ENSG00000101596|A6NHR9-2|SMCHD1 9.815072377522789 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11754 60.662 111.0 768660.0 25 0 93328.0 + 30729 RGLDIEGVKTV 11 90 593.8436878316429 1185.6728227300855 2 593.8437988162041 MULTI CID FTMS 0 0 0 11744 678473.375 1.0 0 0.0 10 Unmodified _RGLDIEGVKTV_ ENSG00000124228|ENST00000618172|DDX27;ENST00000471144.1_1_20:47852594-47852858:+|nuORF;ENST00000484427.5_1_20:47852594-47860368:+|nuORF;nc|ENSG00000124228|Q96GQ7|DDX27 33.59337547418096 0.3110868263875379 3 {[TV]|[{I|L}S]}K[EP]EGVKTV 11 5 + 75.849 0.0 0.0 6.3971 6.3971 86.283 0.0 0.0 0.0 7.033348097384689 55.55820693370112 7.033348097384689 6.575773191777941 0 1.453119819790884 1.154901959985743 0.3807196863200844 0.0 {[TV]|[{I|L}S]}K[EP]EGVKTV;{[TV]|[{I|L}S]}K[EP]ERKTV;{[TV]|[{I|L}S]}K[EP]WVKTV;[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}EGVKTV;{[TV]|[{I|L}S]}K[EP]EKRTV;[KT]V[EP]EGVKTV;{[QV]|[N{I|L}]|[RA]|[KV]}T[EP]EGVKTV;[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}ERKTV;{[TV]|[{I|L}S]}K[EP]TRRTV;[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}WVKTV 6.3971;5.8425;5.599;5.4231;5.2304;4.9642;4.9153;4.8684;4.733;4.6249 -;-;-;-;-;-;-;-;-;- 785 1 1.384 69272.3 1.0 6368 5384 11744 HBL1_DMSO_200M_050219_1,11754 HBL1_DMSO_200M_050219_1,11754,RGLDIEGVKTV False True RGLDIEGVKTV 60.662109 593.843798816204 13137766.0 11744.0 ENST00000471144.1_1_20:47852594-47852858:+|nuORF;;ENST00000484427.5_1_20:47852594-47860368:+|nuORF;;ENSG00000124228|ENST00000618172|DDX27;;nc|ENSG00000124228|Q96GQ7|DDX27 8.139803250630697 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11755 60.663 38.0 768340.0 25 0 77163.0 + 24562 MLEQYWTMV 9 72 400.8523456005617 1199.535207401885 3 400.8521911501884 MULTI CID FTMS 0 0 0 11744 692096.8125 0.921922765967526 -1 0.1539115905761718 11 Unmodified _MLEQYWTMV_ REV__nc|ENSG00000144290|Q6U841-4|SLC4A10 5.230669730166228 0.7320841359114558 3 V 1 -1 15.485 0.0 0.0 1.2909 0.0 0.0 1082.4556232117466 0.0 1082.4556232117466 0.0 2.2969624387961574 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2909 + + 11 + 1 1.384 25569.0 1.0 6369 5384 11744 HBL1_DMSO_200M_050219_1,11755 HBL1_DMSO_200M_050219_1,11755,MLEQYWTMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11756 60.666 150.0 488470.0 25 0 75343.0 + 12949 HAFQTLTHI 9 109 534.2844473057283 1066.5543416782566 2 534.2856933474541 MULTI CID FTMS 0 0 0 11744 525207.8125 1.0 0 0.0 12 Unmodified _HAFQTLTHI_ ENSG00000136731|ENST00000259253|UGGT1;ENST00000438277.5_1_2:128855105-128928859:+|nuORF;nc|ENSG00000136731|Q9NYU2-2|UGGT1 63.960520009940105 0.0238892913700936 3 HA{M(Oxidation (M))|F}QT{I|L}T{I|L}H 9 2 + 76.263 0.0 0.0 7.1504 7.1504 83.558 0.0 0.0 0.0 17.89954126935239 2.787536009528296 2.787536009528296 2.787536009528296 0 2.2440840204505514 1.6989700043360187 0.0 0.0 HA{M(Oxidation (M))|F}QT{I|L}T{I|L}H;HA{M(Oxidation (M))|F}QT{I|L}TH{I|L};H[HV][NP]{I|L}T{I|L}H;H[HV][NP]{I|L}TH{I|L} 7.1504;6.8891;2.4757;2.2144 -;+;-;- + 312 + 1 1.384 64066.7 1.0 6370 5384 11744 HBL1_DMSO_200M_050219_1,11756 HBL1_DMSO_200M_050219_1,11756,HAFQTLTHI True True HAFQTLTHI 60.66628 534.285693347454 4408176.5 11744.0 ENSG00000136731|ENST00000259253|UGGT1;;nc|ENSG00000136731|Q9NYU2-2|UGGT1;;ENST00000438277.5_1_2:128855105-128928859:+|nuORF 6.343870639801025 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11757 60.668 90.0 688460.0 25 0 98744.0 + 30730 RGLDIEGVKTV 11 79 396.2314550284564 1185.672535685569 3 396.2307311892509 MULTI CID FTMS 0 0 0 11744 527009.25 1.0 0 0.0 13 Unmodified _RGLDIEGVKTV_ ENSG00000124228|ENST00000618172|DDX27;ENST00000471144.1_1_20:47852594-47852858:+|nuORF;ENST00000484427.5_1_20:47852594-47860368:+|nuORF;nc|ENSG00000124228|Q96GQ7|DDX27 16.838377633395154 0.6848892027246138 3 {[DA]|[EG]}[RV]{I|L}ER[KT]V 10 5 {[DA]|[EG]}[RV]{I|L} + + 24.935 19.365 3.4936 2.103 2.103 48.916 0.0 0.0 0.0 0.0 5.56958291823344 0.0 0.0 0 0.5 0.0 0.8252574989159953 0.0 {[DA]|[EG]}[RV]{I|L}ER[KT]V 2.103 - 127 + 1 1.384 54825.6 1.0 6371 5384 11744 HBL1_DMSO_200M_050219_1,11757 HBL1_DMSO_200M_050219_1,11757,RGLDIEGVKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11758 60.67 63.0 604960.0 25 0 44653.0 + 31902 RTVEASLEAV 10 58 537.7942021718078 1073.5738514104155 2 537.7941772341728 MULTI CID FTMS 0 0 0 11744 539500.875 0.7585548183267672 -3 0.3689117431640625 14 Unmodified _RTVEASLEAV_ chr19:17543433-17546686|45|45.27|0.54|6.38|+|ENST00000599124|NIBAN3,NIBAN3;chr19:17546797-17549455|45|19.44|0.22|6.49|+|ENST00000600519|NIBAN3,NIBAN3;chr19:17546797-17551786|45|44.04|0.49|6.48|+|ENST00000600871|NIBAN3,NIBAN3;chr19:17549527-17553313|46|34.41|0.39|6.48|+|ENST00000601861|NIBAN3,NIBAN3;ENSG00000167483|ENST00000599164|NIBAN3;ENST00000595601.1_1_19:17651040-17654446:+|nuORF;nc|ENSG00000167483|Q86XR2-2|NIBAN3;nc|ENSG00000167483|Q86XR2-3|NIBAN3;nc|ENSG00000167483|Q86XR2-4|NIBAN3;nc|ENSG00000167483|Q86XR2-5|NIBAN3;nc|ENSG00000167483|Q86XR2-6|NIBAN3;nc|ENSG00000167483|Q86XR2-7|NIBAN3;nc|ENSG00000167483|Q86XR2|NIBAN3 18.373094154950223 0.5392593366289069 3 TS{I|L}EAV 6 4 56.146 0.0 0.0 5.2299 0.0 0.0 455.2360096662125 0.0 455.2360096662125 0.0 45.688812894078126 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 TS{I|L}EAV 5.2299 - 73 1 1.384 40620.2 1.0 6372 5384 11744 HBL1_DMSO_200M_050219_1,11758 HBL1_DMSO_200M_050219_1,11758,RTVEASLEAV False True RTVEASLEAV 60.669811 537.794177234173 5038581.5 11744.0 chr19:17546797-17549455|45|19.44|0.22|6.49|+|ENST00000600519|NIBAN3,NIBAN3;;chr19:17549527-17553313|46|34.41|0.39|6.48|+|ENST00000601861|NIBAN3,NIBAN3;;nc|ENSG00000167483|Q86XR2-3|NIBAN3;;nc|ENSG00000167483|Q86XR2-5|NIBAN3;;nc|ENSG00000167483|Q86XR2-4|NIBAN3;;nc|ENSG00000167483|Q86XR2-6|NIBAN3;;ENSG00000167483|ENST00000599164|NIBAN3;;chr19:17546797-17551786|45|44.04|0.49|6.48|+|ENST00000600871|NIBAN3,NIBAN3;;ENST00000595601.1_1_19:17651040-17654446:+|nuORF;;nc|ENSG00000167483|Q86XR2|NIBAN3;;nc|ENSG00000167483|Q86XR2-2|NIBAN3;;nc|ENSG00000167483|Q86XR2-7|NIBAN3;;chr19:17543433-17546686|45|45.27|0.54|6.38|+|ENST00000599124|NIBAN3,NIBAN3 3.0182942748069763 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11759 60.672 92.0 582070.0 25 0 68605.0 + 40228 VGRWAGPL 8 83 428.2453654474736 0 428.2422668337822 PEAK CID FTMS 0 0 0 11744 530709.5625 0.4056089211719341 -6 0.6386184692382812 15 Unmodified _VGRWAGPL_ REV__ENSG00000108576|ENST00000650711|SLC6A4;REV__nc|ENSG00000108576|P31645-2|SLC6A4 10.183394434864962 0.5394990767616434 3 A{I|L}AE 4 -1 14.271 0.0 0.0 1.6702 0.0 0.0 356.19872542444085 111.05687891177968 467.2556043362205 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.6861818737241735 0.0 A{I|L}AE 1.6702 - 35 + 1 1.384 48089.8 1.0 6373 5384 11744 HBL1_DMSO_200M_050219_1,11759 HBL1_DMSO_200M_050219_1,11759,VGRWAGPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11760 60.674 111.0 828250.0 25 0 109740.0 + 23133 LSPRQVKPL 9 112 346.5538754266155 1036.6397968800466 3 346.5535766482353 MULTI CID FTMS 0 0 0 11744 476672.0 0.6224532818400471 4 -0.2297210693359375 16 Unmodified _LSPRQVKPL_ REV__ENSG00000185567|ENST00000333244|AHNAK2;REV__nc|ENSG00000185567|Q8IVF2-3|AHNAK2 10.799506525563784 0.5443532743200366 3 {[TV]|[{I|L}S]}{I|L}R 4 -1 34.935 0.0 0.0 3.37 0.0 0.0 0.0 564.3292560130559 564.3292560130559 20.24227503252014 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}R 3.37 - 163 + 1 1.384 83223.3 1.0 6374 5384 11744 HBL1_DMSO_200M_050219_1,11760 HBL1_DMSO_200M_050219_1,11760,LSPRQVKPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11761 60.686 669.0 277700.0 25 0 75814.0 -1 0 52 1190.498983367263 3568.475120701989 3 1191.167163074017 MULTI CID FTMS 0 0 0 11744 397180.875 0.3739803495500509 -3 0.3689117431640625 17 3 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.26521 0.0 0.0 1797.618263513159 1563.7598017802654 3361.3780652934247 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.26521 - 34 + 1 1.384 156608.3 1.0 6375 5384 11744 HBL1_DMSO_200M_050219_1,11761 HBL1_DMSO_200M_050219_1,11761, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11762 60.69 210.0 461480.0 25 0 22371.0 292 ADRLAQMSIC 10 135 554.2673566139629 1106.5201602947257 2 554.2676269412041 MULTI CID FTMS 0 0 0 11744 365018.40625 0.2976127615216703 1 -0.0579719543457031 18 Unmodified _ADRLAQMSIC_ ENSG00000162813|ENST00000322067|BPNT1;ENST00000482136.5_1_1:220240458-220263036:-|nuORF;ENST00000548668.1_1_1:220240634-220247398:-|nuORF;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1 16.149105407346934 0.5765757077271437 3 {[DA]|[EG]}{I|L}RA{I|L}Q 7 6 35.704 0.0 0.0 3.2267 0.0 0.0 0.0 336.0673397854411 336.0673397854411 22.0419727985297 0.0 0.0 0.0 0 1.1989700043360187 1.5228787452803376 0.0 0.25 {[DA]|[EG]}{I|L}RA{I|L}Q 3.2267 - 273 1 1.384 82450.1 1.0 6376 5384 11744 HBL1_DMSO_200M_050219_1,11762 HBL1_DMSO_200M_050219_1,11762,ADRLAQMSIC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11763 60.699 545.0 215130.0 25 0 16089.0 + -1 NCGCCNDEE 9 170 579.1664874720518 1156.3184220109035 2 579.6686889529228 MULTI CID FTMS 0 0 0 11744 315149.09375 1.0 0 0.0 19 3 Carbamidomethyl (C) _NC(Carbamidomethyl (C))GC(Carbamidomethyl (C))C(Carbamidomethyl (C))NDEE_ REV__ENSG00000134780|ENST00000257215|DAGLA 0.4583401331227399 0.8986837419108351 3 Q 1 -1 13.664 0.0 0.0 1.1817 0.0 0.0 1010.2490993564098 0.0 1010.2490993564098 0.0 0.1696276573088884 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.064909327626439 Q 1.1817 - 367 + 1 1.384 89869.5 1.0 6377 5384 11744 HBL1_DMSO_200M_050219_1,11763 HBL1_DMSO_200M_050219_1,11763,NCGCCNDEE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11764 60.703 198.0 697840.0 25 0 102670.0 + 16913 KIIYIVHDEV 10 127 614.8505688347162 1227.6865847362324 2 614.8500854372978 MULTI CID FTMS 0 0 0 11744 301078.9375 0.0429898340706203 -6 0.6386184692382812 20 Unmodified _KIIYIVHDEV_ ENSG00000100567|ENST00000216455|PSMA3;nc|ENSG00000100567|P25788-2|PSMA3 70.49555756994154 0.0189206556242783 3 K{I|L}{I|L}Y{I|L}V 6 4 70.588 0.0 0.0 5.7497 0.0 0.0 0.0 495.1848108800813 495.1848108800813 16.246526217572935 0.0 0.0 0.0 0 2.3243923658886185 1.0969100130080565 0.0 0.0 + K{I|L}{I|L}Y{I|L}V 5.7497 + + 2063 + 1 1.384 112861.4 1.0 6378 5384 11744 HBL1_DMSO_200M_050219_1,11764 HBL1_DMSO_200M_050219_1,11764,KIIYIVHDEV True True KIIYIVHDEV 60.703234 614.850085437298 200219312.0 11744.0 ENSG00000100567|ENST00000216455|PSMA3;;nc|ENSG00000100567|P25788-2|PSMA3 4.769597768783569 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11766 60.707 16.0 1835500.0 25 0 261800.0 + 24769 MPHNQFIKM 9 70 573.2831111860442 1144.5516694388882 2 573.2834960818291 MULTI CID FTMS 0 0 0 11765 1471069.875 0.6533068758836961 1 -0.0498809814453125 1 Unmodified _MPHNQFIKM_ ENSG00000162511|ENST00000294507|LAPTM5 18.1463463914782 0.3454829746528889 3 MPHRPH{M(Oxidation (M))|F} 7 5 37.951 0.0 0.0 3.3158 0.0 0.0 0.0 239.07866846256096 239.07866846256096 21.012969751618087 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MPHRPH{M(Oxidation (M))|F} 3.3158 - 260 + 1 1.384 28546.6 1.0 6379 5385 11765 HBL1_DMSO_200M_050219_1,11766 HBL1_DMSO_200M_050219_1,11766,MPHNQFIKM False True MPHNQFIKM 60.707394 573.283496081829 19043486.0 11765.0 ENSG00000162511|ENST00000294507|LAPTM5 6.87913449605306 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11767 60.709 15.0 2176900.0 25 0 203940.0 + 15379 IPNFPRSTV 9 58 515.7872433178525 1029.5599337025048 2 515.7878906130791 MULTI CID FTMS 0 0 0 11765 1788706.5 0.483567072113668 2 -0.1122894287109375 2 Unmodified _IPNFPRSTV_ ENSG00000198805|ENST00000361505|PNP;ENST00000557229.5_1_14:20937683-20942788:+|nuORF 17.11289562659939 0.3734572693229295 3 {I|L}PN{M(Oxidation (M))|F} 4 5 49.769 0.0 0.0 4.834 0.0 0.0 0.0 555.2907809598169 555.2907809598169 25.91296819666028 0.0 0.0 0.0 0 0.2614393726401688 1.0969100130080565 0.0 0.4247425010840047 + {I|L}PN{M(Oxidation (M))|F} 4.834 + + 15 + 1 1.384 34557.1 1.0 6380 5385 11765 HBL1_DMSO_200M_050219_1,11767 HBL1_DMSO_200M_050219_1,11767,IPNFPRSTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11768 60.71 7.7 4062600.0 25 0 686880.0 + 4459 DAYALNHTL 9 63 509.25362910442976 1016.4927052756595 2 509.2537414431572 MULTI CID FTMS 0 0 0 11765 2948184.25 0.0089746148791422 18 -1.4370193481445312 3 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 41.8396318013385 0.0653578398400075 3 {[DA]|[EG]}YA{I|L}N[HT]{I|L} 9 0 {[DA]|[EG]}Y + + 31.164 24.437 6.9995 3.0658 3.0658 50.328 0.0 0.0 0.0 0.0 6.726759565325295 0.0 0.0 0 0.5 0.0 1.1549471895720984 0.0 + + {[DA]|[EG]}YA{I|L}N[HT]{I|L} 3.0658 + + 67 + 1 1.384 29910.8 1.0 6381 5385 11765 HBL1_DMSO_200M_050219_1,11768 HBL1_DMSO_200M_050219_1,11768,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11769 60.711 75.0 847690.0 25 0 86357.0 + 4966 DGPRVFRVV 9 92 348.8694806463201 1043.5866125391603 3 348.8697387576103 MULTI CID FTMS 0 0 0 11765 567916.375 0.6658759690808664 -2 0.211883544921875 4 Unmodified _DGPRVFRVV_ ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF;nc|ENSG00000179115|Q9Y285-2|FARSA 18.1463463914782 0.3454829746528889 3 DGPRV{M(Oxidation (M))|F}VRV 9 2 + 61.171 0.0 0.0 5.8616 5.8616 80.287 0.0 0.0 0.0 50.89300903677946 3.7427609047424326 3.7427609047424326 3.0102999566398125 0 0.2302046884880938 1.3979400086720375 0.0 0.0 DGPRV{M(Oxidation (M))|F}VRV;DGPRV{M(Oxidation (M))|F}RVV;DGP[VG]V{M(Oxidation (M))|F}VRV;DGP[VG]V{M(Oxidation (M))|F}RVV;DV[NP]V{M(Oxidation (M))|F}VRV;DV[NP]V{M(Oxidation (M))|F}RVV 5.8616;5.5731;4.9792;4.6908;2.5047;2.2162 -;+;-;-;-;- + 104 + 1 1.384 58669.4 1.0 6382 5385 11765 HBL1_DMSO_200M_050219_1,11769 HBL1_DMSO_200M_050219_1,11769,DGPRVFRVV False True DGPRVFRVV 60.711484 348.86973875761 5130276.5 11765.0 ENST00000592662.5_1_19:13039347-13044510:-|nuORF;;ENSG00000179115|ENST00000314606|FARSA;;nc|ENSG00000179115|Q9Y285-2|FARSA 4.229197184244792 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11770 60.713 30.0 856870.0 25 0 54687.0 + 44653 YPFKPPKV 8 59 488.2869567505858 974.5593605679716 2 488.2862426638603 MULTI CID FTMS 0 0 0 11765 511757.0 0.0150808090452379 20 -1.6714019775390625 5 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 24.67388899826682 0.525179942228231 3 YP{M(Oxidation (M))|F}K 4 4 49.412 0.0 0.0 5.0702 0.0 0.0 0.0 436.25657219776656 436.25657219776656 37.422750325201406 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + YP{M(Oxidation (M))|F}K 5.0702 + + 15 + 1 1.384 26501.4 1.0 6383 5385 11765 HBL1_DMSO_200M_050219_1,11770 HBL1_DMSO_200M_050219_1,11770,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11771 60.714 67.0 486640.0 25 0 71565.0 + 21437 LPHFTSEHI 9 56 360.8540855593236 1079.540427278171 3 360.8542358279228 MULTI CID FTMS 0 0 0 11765 438966.5625 1.0 0 0.0 6 Unmodified _LPHFTSEHI_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 15.847184025352805 0.4077185912009129 3 {I|L}PH{M(Oxidation (M))|F}[WM]H{I|L} 8 3 + 33.365 0.0 0.0 3.0907 3.0907 82.76 0.0 0.0 0.0 22.25563154776665 2.9318250140072166 2.9318250140072166 33.364875295848435 0 0.0 0.0 0.0 0.0 {I|L}PH{M(Oxidation (M))|F}[WM]H{I|L} 3.0907 - 30 + 1 1.384 36571.1 1.0 6384 5385 11765 HBL1_DMSO_200M_050219_1,11771 HBL1_DMSO_200M_050219_1,11771,LPHFTSEHI False True LPHFTSEHI 60.714269 360.854235827923 3398311.0 11765.0 ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 5.000863711039226 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11772 60.716 49.0 825770.0 25 0 111190.0 + 4584 DAYSKRFISV 10 74 395.8804371834564 1184.6194821505692 3 395.8802673220634 MULTI CID FTMS 0 0 0 11765 399808.5625 0.6058268291779757 -2 0.211883544921875 7 Unmodified _DAYSKRFISV_ ENSG00000186635|ENST00000393609|ARAP1;ENST00000465814.5_1_11:72407932-72423670:-|nuORF;nc|ENSG00000186635|Q96P48-1|ARAP1;nc|ENSG00000186635|Q96P48-2|ARAP1;nc|ENSG00000186635|Q96P48-3|ARAP1;nc|ENSG00000186635|Q96P48-4|ARAP1;nc|ENSG00000186635|Q96P48-7|ARAP1 12.174745833636583 0.6432616012102976 3 {[DA]|[EG]}[RV]{I|L}W 6 6 23.645 0.0 0.0 1.996 0.0 0.0 0.0 441.21412261371296 441.21412261371296 11.42667503568731 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}[RV]{I|L}W 1.996 - 57 1 1.384 41725.1 1.0 6385 5385 11765 HBL1_DMSO_200M_050219_1,11772 HBL1_DMSO_200M_050219_1,11772,DAYSKRFISV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11773 60.717 81.0 358800.0 25 0 23259.0 + 22147 LPPSALQSV 9 67 456.26343039887297 910.512307864546 2 456.2636291384697 MULTI CID FTMS 0 0 0 11765 320883.59375 0.1109059755939078 -7 0.6965904235839844 8 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 30.22481116460888 0.1466181017706357 3 SV 2 7 15.802 0.0 0.0 1.7355 0.0 0.0 706.4009472461851 0.0 706.4009472461851 0.0 -1.901056208558032 -1.901056208558032 0.0 0 0.0 0.0 0.2614393726401688 0.0 + SV 1.7355 + + 25 + 1 1.384 29755.2 1.0 6386 5385 11765 HBL1_DMSO_200M_050219_1,11773 HBL1_DMSO_200M_050219_1,11773,LPPSALQSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11774 60.719 67.0 479580.0 25 0 33210.0 + 41058 VMLQEGTDL 9 70 503.2495595268408 1004.4845661204816 2 503.2501098513603 MULTI CID FTMS 0 0 0 11765 272983.875 0.2360018025378176 -2 0.211883544921875 9 Unmodified _VMLQEGTDL_ REV__ENSG00000181240|ENST00000321510|SLC25A41;REV__nc|ENSG00000181240|Q8N5S1-2|SLC25A41 8.593279151180031 0.6146971463335029 3 {I|L} 1 -1 14.604 0.0 0.0 1.4539 0.0 0.0 873.3898375821989 0.0 873.3898375821989 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4539 + + 44 + 1 1.384 31385.6 1.0 6387 5385 11765 HBL1_DMSO_200M_050219_1,11774 HBL1_DMSO_200M_050219_1,11774,VMLQEGTDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11775 60.721 67.0 361460.0 25 0 30189.0 9618 FLLESVWY 8 55 528.7749557484037 1055.5353585636074 2 528.7762939333916 MULTI CID FTMS 0 0 0 11765 281479.09375 0.2604478034014326 2 -0.1122894287109375 10 Unmodified _FLLESVWY_ ENST00000379958.2_1_7:92735396-92747190:-|nuORF 14.581692164780916 0.6954967302934248 3 C(Carbamidomethyl (C)){I|L}{[QN]|[E{I|L}]|[KN]} 4 5 18.94 0.0 0.0 1.7944 0.0 0.0 522.2709828107437 0.0 522.2709828107437 0.0 4.3360688456422025 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 C(Carbamidomethyl (C)){I|L}{[QN]|[E{I|L}]|[KN]} 1.7944 - 56 1 1.384 27440.8 1.0 6388 5385 11765 HBL1_DMSO_200M_050219_1,11775 HBL1_DMSO_200M_050219_1,11775,FLLESVWY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11776 60.724 180.0 327950.0 25 0 24191.0 + 44973 YPRISVNNV 9 121 531.2891375448161 0 531.2890502810478 PEAK CID FTMS 0 0 0 11765 237818.078125 0.760506789437498 -2 0.211883544921875 11 Unmodified _YPRISVNNV_ ENSG00000117984|ENST00000236671|CTSD 23.78978130925829 0.1667157386347964 3 DNV 3 7 23.06 0.0 0.0 2.1743 0.0 0.0 116.09260167993598 613.3106173150999 729.4032189950359 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.3807196863200844 DNV 2.1743 - 53 + 1 1.384 51152.3 1.0 6389 5385 11765 HBL1_DMSO_200M_050219_1,11776 HBL1_DMSO_200M_050219_1,11776,YPRISVNNV False True YPRISVNNV 60.724103 531.289050281048 6932913.5 11765.0 ENSG00000117984|ENST00000236671|CTSD 4.755215485890706 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11777 60.734 555.0 338460.0 25 0 29925.0 + 8090 EPFADFHRV 9 147 559.2745374508825 1116.5345219685648 2 559.2735473513603 MULTI CID FTMS 0 0 0 11765 204372.796875 0.2433312383304856 -5 0.4800567626953125 12 Unmodified _EPFADFHRV_ ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF 63.960520009940105 0.0238892913700936 3 EP{M(Oxidation (M))|F}AD{M(Oxidation (M))|F}HRV 9 0 + 90.595 0.0 0.0 8.1139 8.1139 85.221 0.0 0.0 0.0 28.07196863200845 2.367585652254192 2.367585652254192 2.367585652254192 0 0.75 1.3979400086720375 0.0 1.3945990182825423 + + EP{M(Oxidation (M))|F}AD{M(Oxidation (M))|F}HRV;EP{M(Oxidation (M))|F}AD{M(Oxidation (M))|F}HVR;EP{M(Oxidation (M))|F}AD{M(Oxidation (M))|F}VHR;EP{M(Oxidation (M))|F}ADV{M(Oxidation (M))|F}HR;EP{M(Oxidation (M))|F}AVD{M(Oxidation (M))|F}HR;EP{M(Oxidation (M))|F}AV{M(Oxidation (M))|F}DHR;EP{M(Oxidation (M))|F}VAD{M(Oxidation (M))|F}HR;EP{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}DHR;EP{M(Oxidation (M))|F}W{M(Oxidation (M))|F}V{[HG]|PP}V;EP{M(Oxidation (M))|F}WV{M(Oxidation (M))|F}{[HG]|PP}V 8.1139;7.9019;7.2049;6.563;5.8661;5.7542;5.0583;4.9464;4.7582;4.3309 +;-;-;-;-;-;-;-;-;- + 1750 + 1 1.384 149225.6 1.0 6390 5385 11765 HBL1_DMSO_200M_050219_1,11777 HBL1_DMSO_200M_050219_1,11777,EPFADFHRV True True EPFADFHRV 60.733855 559.27354735136 8893050.0 11765.0 ENST00000532451.1_1_11:121323091-121416136:+|nuORF;;ENSG00000137642|ENST00000260197|SORL1 9.605047225952148 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11778 60.736 93.0 357130.0 25 0 39789.0 + -1 LVLIPMPLV 9 70 337.5500828701165 1009.6284192105496 3 337.5498229861259 MULTI CID FTMS 0 0 0 11765 213719.4375 0.2495616902179795 9 -0.6305999755859375 13 Oxidation (M) _LVLIPM(Oxidation (M))PLV_ REV__ENSG00000144040|ENST00000272433|SFXN5;REV__ENST00000461352.5_1_2:73172212-73286292:-|nuORF;REV__ENST00000474528.5_1_2:73172153-73286292:-|nuORF 5.731851221503515 0.7145881442174411 3 {I|L}V 2 -1 20.969 0.0 0.0 2.0769 0.0 0.0 0.0 794.4506561566336 794.4506561566336 11.505149978319906 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 2.0769 + + 18 + 1 1.384 34743.8 1.0 6391 5385 11765 HBL1_DMSO_200M_050219_1,11778 HBL1_DMSO_200M_050219_1,11778,LVLIPMPLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11779 60.738 83.0 444560.0 25 0 31511.0 + 38196 TPRHIIVRF 9 76 380.2327568163181 1137.6764410491542 3 380.2327148318291 MULTI CID FTMS 0 0 0 11765 211244.15625 0.0166671103133645 11 -0.7403068542480469 14 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 6.630372943996041 0.683221206560437 3 [{M(Oxidation (M))|F}T]SR{I|L}{I|L}{M(Oxidation (M))|F}[RV] 9 5 [{M(Oxidation (M))|F}T]SR + + 10.718 -0.4924 -0.10023 0.94213 0.94213 48.369 0.0 0.0 0.0 0.0 5.233871898888154 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 [{M(Oxidation (M))|F}T]SR{I|L}{I|L}{M(Oxidation (M))|F}[RV] 0.94213 - 49 + 1 1.384 33735.4 1.0 6392 5385 11765 HBL1_DMSO_200M_050219_1,11779 HBL1_DMSO_200M_050219_1,11779,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11780 60.74 124.0 272930.0 25 0 28424.0 + 22427 LPTGTNDSAIY 11 78 384.524544169877 1150.551803109831 3 384.5245239138603 MULTI CID FTMS 0 0 0 11765 188714.53125 0.4499163512376329 -2 0.211883544921875 15 Unmodified _LPTGTNDSAIY_ REV__ENSG00000218336|ENST00000511685|TENM3 6.723162845929126 0.8434276150410019 3 Y 1 -1 12.474 0.0 0.0 1.0842 0.0 0.0 969.477033067642 0.0 969.477033067642 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0842 + + 47 + 1 1.384 34872.5 1.0 6393 5385 11765 HBL1_DMSO_200M_050219_1,11780 HBL1_DMSO_200M_050219_1,11780,LPTGTNDSAIY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11781 60.75 575.0 173010.0 25 0 16688.0 + -1 ELINLHVLCVM 11 122 670.8552394650153 1339.6959259968305 2 670.8560058474541 MULTI CID FTMS 0 0 0 11765 171620.5 0.1568582558275569 3 -0.1717491149902343 16 Carbamidomethyl (C) _ELINLHVLC(Carbamidomethyl (C))VM_ REV__ENSG00000119041|ENST00000263956|GTF3C3;REV__nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3 15.248480904072842 0.7179608125786238 3 [{I|L}P]ST{I|L}TGP 8 -1 27.46 0.0 0.0 2.0497 0.0 0.0 0.0 570.2520783812596 570.2520783812596 7.74506195966995 0.0 0.0 0.0 0 0.5 0.8538719643217619 1.5941876774005248 0.0 [{I|L}P]ST{I|L}TGP 2.0497 - 2211 1 1.384 77526.4 1.0 6394 5385 11765 HBL1_DMSO_200M_050219_1,11781 HBL1_DMSO_200M_050219_1,11781,ELINLHVLCVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11782 60.753 126.0 313870.0 25 0 30922.0 22059 LPPPPPPQL 9 87 478.28392878063295 954.553304628066 2 478.2842895388603 MULTI CID FTMS 0 0 0 11765 176925.4375 0.3047712057596749 -7 0.6965904235839844 17 Unmodified _LPPPPPPQL_ ENSG00000184083|ENST00000375180|FAM120C;nc|ENSG00000184083|Q9NX05-2|FAM120C;REV__ENSG00000113448|ENST00000340635|PDE4D 46.92087301778293 0.0471210510596396 3 [{I|L}P][YK]P 5 6 26.695 0.0 0.0 2.7966 0.0 0.0 0.0 353.1796833724597 353.1796833724597 13.595756168365014 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 [{I|L}P][YK]P 2.7966 - 91 1 1.384 35283.6 1.0 6395 5385 11765 HBL1_DMSO_200M_050219_1,11782 HBL1_DMSO_200M_050219_1,11782,LPPPPPPQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11784 60.757 58.0 736200.0 25 0 101320.0 + 3868 DAKSTIVSI 9 66 467.2664156794811 932.5182784257622 2 467.2663146853447 MULTI CID FTMS 0 0 0 11783 1038584.8125 0.4001451780375416 3 -0.1374626159667968 1 Unmodified _DAKSTIVSI_ ENSG00000166479|ENST00000299608|TMX3;ENST00000578816.1_1_18:66344172-66346774:-|nuORF 51.629811660486645 0.0367964933207742 3 {[TV]|[{I|L}S]}NST{I|L}V{[TV]|[{I|L}S]} 9 3 + 64.702 0.0 0.0 6.9384 6.9384 85.589 0.0 0.0 0.0 4.3933269383026285 7.147642715192504 4.3933269383026285 4.3933269383026285 0 0.8494850021680094 1.5228787452803376 1.5114393726401687 0.0 {[TV]|[{I|L}S]}NST{I|L}V{[TV]|[{I|L}S]};[VS]QST{I|L}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}GGST{I|L}V{[TV]|[{I|L}S]};[VS][AG]ST{I|L}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}T[NS]{I|L}V{[TV]|[{I|L}S]};{[SA]|[TG]}[VG]ST{I|L}V{[TV]|[{I|L}S]};{[VA]|[{I|L}G]}[SG]ST{I|L}V{[TV]|[{I|L}S]} 6.9384;6.4673;5.9509;5.4798;4.9017;3.8062;3.4644 -;-;-;-;-;-;- 294 1 1.384 38291.4 1.0 6396 5386 11783 HBL1_DMSO_200M_050219_1,11784 HBL1_DMSO_200M_050219_1,11784,DAKSTIVSI True True DAKSTIVSI 60.757275 467.266314685345 22811680.0 11783.0 ENSG00000166479|ENST00000299608|TMX3;;ENST00000578816.1_1_18:66344172-66346774:-|nuORF 4.392136255900065 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11785 60.761 211.0 499980.0 25 0 42124.0 + 39405 VALATRVI 8 126 421.7762963395155 841.538039745831 2 421.7763549685478 MULTI CID FTMS 0 0 0 11783 170212.078125 0.4710080052880871 -1 0.0498809814453125 2 Unmodified _VALATRVI_ ENSG00000084774|ENST00000264705|CAD 37.97399986684836 0.2681860861828418 3 VA{I|L}AT 5 3 66.102 0.0 0.0 7.8549 0.0 0.0 0.0 383.2425936334594 383.2425936334594 55.824479243034645 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.805462187404089 0.0 + VA{I|L}AT 7.8549 + + 93 + 1 1.384 88435.4 1.0 6397 5386 11783 HBL1_DMSO_200M_050219_1,11785 HBL1_DMSO_200M_050219_1,11785,VALATRVI False True VALATRVI 60.761279 421.776354968548 1681399.625 11783.0 ENSG00000084774|ENST00000264705|CAD 0.8510157515605291 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11786 60.762 12.0 2222800.0 25 0 163080.0 + 43102 VYNYAEQTL 9 64 550.7665371764102 1099.5185214196204 2 550.7667724490166 MULTI CID FTMS 0 0 0 11783 2935766.0 0.2857852370814485 -1 0.0498809814453125 3 Unmodified _VYNYAEQTL_ ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 16.942295170755138 0.3780752226737986 3 [YV]NY 4 5 25.713 0.0 0.0 2.3386 0.0 0.0 0.0 557.2555569022953 557.2555569022953 4.286662482156345 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [YV]NY 2.3386 + + 63 1 1.384 26350.1 1.0 6398 5386 11783 HBL1_DMSO_200M_050219_1,11786 HBL1_DMSO_200M_050219_1,11786,VYNYAEQTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11787 60.764 16.0 2949900.0 25 0 447330.0 + -1 QCQDHDCL 8 80 509.68993700512135 1017.3653210770428 2 509.6902953982353 MULTI CID FTMS 0 0 0 11783 1694499.875 1.0 0 0.0 4 Carbamidomethyl (C) _QC(Carbamidomethyl (C))QDHDCL_ REV__ENST00000434304.2_1_22:17154630-17158220:-|nuORF 5.760428011301431 0.7893668129297577 3 DY 2 -1 18.443 0.0 0.0 1.8129 0.0 0.0 721.2680531232437 0.0 721.2680531232437 0.0 1.2518379017509993 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 DY 1.8129 - 91 1 1.384 40915.3 1.0 6399 5386 11783 HBL1_DMSO_200M_050219_1,11787 HBL1_DMSO_200M_050219_1,11787,QCQDHDCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11788 60.769 304.0 603860.0 25 0 56368.0 + -1 YCSSNNCCP 9 183 524.1678965792782 1046.3212402253564 2 524.6697265505791 MULTI CID FTMS 0 0 0 11783 710155.9375 0.9760749220406792 -2 0.1078529357910156 5 Carbamidomethyl (C) _YC(Carbamidomethyl (C))SSNNCCP_ REV__ENST00000352251.7_2_13:39587562-39587667:-|nuORF 6.723162845929126 0.6799819581413107 3 [YV]K 3 -1 21.963 0.0 0.0 2.099 0.0 0.0 0.0 653.0683770263907 653.0683770263907 6.389530984084217 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YV]K 2.099 - 409 1 1.384 146995.8 1.0 6400 5386 11783 HBL1_DMSO_200M_050219_1,11788 HBL1_DMSO_200M_050219_1,11788,YCSSNNCCP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11789 60.78 599.0 466870.0 25 0 47929.0 43038 VYCDMETDG 9 204 344.79235570238086 1031.355237707343 3 344.7921325564384 MULTI CID FTMS 0 0 0 11783 323824.96875 0.6628205324197397 -1 0.0498809814453125 6 Unmodified _VYCDMETDG_ ENSG00000120332|ENST00000239462|TNN 7.910154910731844 0.6385446671287552 3 VYD 3 6 42.747 0.0 0.0 4.1448 0.0 0.0 0.0 651.1737296778435 651.1737296778435 18.88592000247522 0.0 0.0 0.0 0 0.0796896906561032 1.3010299956639813 0.4247425010840047 0.0 VYD 4.1448 - 144 + 1 1.384 222071.8 1.0 6401 5386 11783 HBL1_DMSO_200M_050219_1,11789 HBL1_DMSO_200M_050219_1,11789,VYCDMETDG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11790 60.788 454.0 720460.0 25 0 160690.0 11002 GASGGGGD 8 192 577.2196070652163 576.2123305986163 1 577.2207519412041 MULTI CID FTMS 0 0 0 11783 305019.875 0.3674595419900207 -4 0.3685569763183594 7 Unmodified _GASGGGGD_ ENST00000521689.5_1_8:98881135-98900426:+|nuORF 2.577480529830294 0.808687252328423 3 V 1 8 12.474 0.0 0.0 2.1649 0.0 0.0 459.1328379612124 0.0 459.1328379612124 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.1649 - 136 + 1 1.384 244267.2 1.0 6402 5386 11783 HBL1_DMSO_200M_050219_1,11790 HBL1_DMSO_200M_050219_1,11790,GASGGGGD False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11791 60.791 189.0 799930.0 25 0 52594.0 + 32652 SCPNHFEGL 9 176 502.2207573685061 1002.426961803812 2 502.2222778201103 MULTI CID FTMS 0 0 0 11783 220850.609375 0.899469377913488 -1 0.0498809814453125 8 Unmodified _SCPNHFEGL_ ENST00000488952.1_1_2:96809564-96810280:-|nuORF;ENSG00000158050|ENST00000288943|DUSP2 19.256988751693697 0.3154191944385105 3 [CS][HM]PVC(Carbamidomethyl (C))G{I|L} 9 5 + 31.69 0.0 0.0 3.1613 3.1613 71.411 0.0 0.0 0.0 5.314528456073976 1.3156881916728516 1.3156881916728516 2.5965946725705784 0 0.6549471895720985 2.0 0.0 0.0 [CS][HM]PVC(Carbamidomethyl (C))G{I|L};[CS][NP]E{[{M(Oxidation (M))|F}H]|[RQ]}G{I|L};[CS]W[WP]PD{I|L};[CS][HM]PVC(Carbamidomethyl (C))AV;[CS][NP]E{[{M(Oxidation (M))|F}H]|[RQ]}AV;[CS]W[WP]PEV;[CS]WA[Y{I|L}]N{M(Oxidation (M))|F};[CS]W[WP]EPV;[CS][NP][PG]KS[DV];[CS]W[PG]{[{M(Oxidation (M))|F}H]|[RQ]}G{I|L} 3.1613;2.9023;2.8226;2.7942;2.5352;2.4555;2.2592;2.2459;2.2344;2.1783 -;-;-;-;-;-;-;-;-;- 671 + 1 1.384 119219.9 1.0 6403 5386 11783 HBL1_DMSO_200M_050219_1,11791 HBL1_DMSO_200M_050219_1,11791,SCPNHFEGL False False SCPNHFEGL 60.791342 502.22227782011 1996625.75 11783.0 ENST00000488952.1_1_2:96809564-96810280:-|nuORF;;ENSG00000158050|ENST00000288943|DUSP2 -0.5407158533732096 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11792 60.802 588.0 334470.0 25 0 38640.0 + 3571 DAAEFRVV 8 184 453.737512387264 905.460471841328 2 453.7375976443291 MULTI CID FTMS 0 0 0 11783 239859.15625 0.4067796241883876 -1 0.0498809814453125 9 Unmodified _DAAEFRVV_ ENSG00000176658|ENST00000318217|MYO1D 52.268347100219714 0.1285778651304833 3 {[DA]|[EG]}AE{M(Oxidation (M))|F}RVV 8 0 + 72.749 0.0 0.0 8.0345 8.0345 96.403 0.0 0.0 0.0 55.83537029799227 10.170595915742991 10.170595915742991 22.769250191953667 0 1.274227503252014 2.0 0.4247425010840047 0.2742275032520141 + + {[DA]|[EG]}AE{M(Oxidation (M))|F}RVV;{[DA]|[EG]}AE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L};{[DA]|[EG]}A[VP][HT]PV;{[DA]|[EG]}A[VP][TP]HV;{[DA]|[EG]}A[DV][R{M(Oxidation (M))|F}]{I|L};{[DA]|[EG]}A[VP][TP]VH;{[DA]|[EG]}[VG]E[R{M(Oxidation (M))|F}]{I|L};WRE[R{M(Oxidation (M))|F}]{I|L};{[DA]|[EG]}[VG][W{M(Oxidation (M))|F}]{I|L}V;{[DA]|[EG]}[VG][W{M(Oxidation (M))|F}]V{I|L} 8.0345;5.5198;4.8425;4.5975;4.0784;3.8255;2.1977;2.0597;1.7816;1.6942 +;-;-;-;-;-;-;-;-;- + 719 + 1 1.384 153568.9 1.0 6404 5386 11783 HBL1_DMSO_200M_050219_1,11792 HBL1_DMSO_200M_050219_1,11792,DAAEFRVV False True DAAEFRVV 60.801629 453.737597644329 2483360.25 11783.0 ENSG00000176658|ENST00000318217|MYO1D 4.7556978066762285 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11793 60.812 567.0 197260.0 25 0 12800.0 + 31813 RSYDDQLAQI 10 131 604.7992293930863 1207.5839058529723 2 604.7986938357353 MULTI CID FTMS 0 0 0 11783 148897.140625 0.8307762950463262 -1 0.0498809814453125 10 Unmodified _RSYDDQLAQI_ ENSG00000156928|ENST00000466681|MALSU1;ENST00000476623.1_1_7:23347480-23349159:+|nuORF 29.43715596616401 0.3072975788498757 3 {[QN]|[E{I|L}]|[KN]}A[YQ]C(Carbamidomethyl (C)){I|L}AQ{I|L} 10 6 + 66.432 0.0 0.0 5.5012 5.5012 77.199 0.0 0.0 0.0 1.807724293727034 16.20546181473786 1.807724293727034 1.807724293727034 0 0.9163865622122672 0.8860566476931632 0.4947026752325155 0.805462187404089 {[QN]|[E{I|L}]|[KN]}A[YQ]C(Carbamidomethyl (C)){I|L}AQ{I|L};[AG]A[HA]NDQ{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}A[YC(Carbamidomethyl (C))]Q{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}[KC]MC(Carbamidomethyl (C)){I|L}AQ{I|L};[{I|L}T][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]DQ{I|L}AQ{I|L};[QA][HA]NDQ{I|L}AQ{I|L};{[DS]|[MA]|[CV]|TT}VGYDQ{I|L}AQ{I|L};{[DS]|[MA]|[CV]|TT}VTAMC(Carbamidomethyl (C)){I|L}AQ{I|L};[{I|L}A]MSAMC(Carbamidomethyl (C)){I|L}AQ{I|L};[{I|L}A]E[YQ]C(Carbamidomethyl (C)){I|L}AQ{I|L} 5.5012;5.3515;5.3449;5.252;5.0701;5.053;5.0243;4.9493;4.8548;4.7766 -;-;-;-;-;-;-;-;-;- 2071 1 1.384 82558.0 1.0 6405 5386 11783 HBL1_DMSO_200M_050219_1,11793 HBL1_DMSO_200M_050219_1,11793,RSYDDQLAQI False True RSYDDQLAQI 60.811575 604.798693835735 1316660.125 11783.0 ENST00000476623.1_1_7:23347480-23349159:+|nuORF;;ENSG00000156928|ENST00000466681|MALSU1 7.423914114634196 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11794 60.815 206.0 708720.0 25 0 106620.0 35282 SSLNRELV 8 156 459.2559763196936 0 459.1852294802666 PEAK CID FTMS 0 0 0 11783 47277.83203125 0.1970225725012137 3 -0.1374626159667968 11 Unmodified _SSLNRELV_ ENSG00000263528|ENST00000581977|IKBKE;nc|ENSG00000263528|Q14164-2|IKBKE 14.581692164780916 0.4900557725783909 3 G 1 8 5.4846 0.0 0.0 0.59843 0.0 0.0 788.4020455575528 68.05138574771718 856.45343130527 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.59843 - 112 + 1 1.384 115383.2 1.0 6406 5386 11783 HBL1_DMSO_200M_050219_1,11794 HBL1_DMSO_200M_050219_1,11794,SSLNRELV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11796 60.82 12.0 3729800.0 25 0 961800.0 + 36959 TFASRVSSL 9 66 484.2649797018826 966.5154064705652 2 484.2640563845634 MULTI CID FTMS 0 0 0 11795 4285726.5 1.0 0 0.0 1 Unmodified _TFASRVSSL_ ENSG00000158195|ENST00000618852|WASF2;nc|ENSG00000158195|Q9Y6W5-2|WASF2 26.268140514670165 0.1969607489560049 3 T{M(Oxidation (M))|F}A[QT]{[TV]|[{I|L}S]}S{I|L} 9 3 + 31.716 0.0 0.0 3.2815 3.2815 74.891 0.0 0.0 0.0 18.41379951283686 1.2704682717586877 1.2704682717586877 4.771212547196626 0 0.4247425010840047 0.0 0.2396518287104437 0.0 T{M(Oxidation (M))|F}A[QT]{[TV]|[{I|L}S]}S{I|L};T{M(Oxidation (M))|F}R[SG]{[TV]|[{I|L}S]}S{I|L};T{M(Oxidation (M))|F}R[WK]{[ET]|[MV]} 3.2815;2.7878;2.195 -;-;- 43 + 1 1.377 40997.3 1.0 6407 5387 11795 HBL1_DMSO_200M_050219_1,11796 HBL1_DMSO_200M_050219_1,11796,TFASRVSSL False True TFASRVSSL 60.819681 484.264056384563 55558048.0 11795.0 ENSG00000158195|ENST00000618852|WASF2;;nc|ENSG00000158195|Q9Y6W5-2|WASF2 3.951111589868864 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11797 60.821 29.0 1456500.0 25 0 202600.0 -1 EQDCKMMF 8 71 552.7093298125568 1103.4041066919135 2 552.7098876833916 MULTI CID FTMS 0 0 0 11795 2070326.0 0.7301022052667698 3 -0.1585578918457031 2 Carbamidomethyl (C),Oxidation (M) _EQDC(Carbamidomethyl (C))KM(Oxidation (M))MF_ ENSG00000271079|ENST00000420911|CTAGE15;ENSG00000271321|ENST00000470691|CTAGE6 5.230669730166228 0.792582437072536 3 [AG]S 3 -1 14.225 0.0 0.0 1.2892 0.0 0.0 0.0 885.2899764031041 885.2899764031041 0.7302319799476482 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [AG]S 1.2892 - 23 1 1.377 43813.2 1.0 6408 5387 11795 HBL1_DMSO_200M_050219_1,11797 HBL1_DMSO_200M_050219_1,11797,EQDCKMMF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11798 60.822 24.0 1733900.0 25 0 317520.0 + 44020 YIGGLSTI 8 68 412.2303899297853 822.4462269263706 2 412.2302429080009 MULTI CID FTMS 0 0 0 11795 2669262.5 1.0 0 0.0 3 Unmodified _YIGGLSTI_ REV__ENSG00000140832|ENST00000268485|MARVELD3 0.7936320650641473 0.8195151834710337 3 N 1 -1 2.7642 0.0 0.0 0.3361 0.0 0.0 410.2730834710956 295.1099032037719 705.3829866748675 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.3361 - 3 + 1 1.377 36539.1 1.0 6409 5387 11795 HBL1_DMSO_200M_050219_1,11798 HBL1_DMSO_200M_050219_1,11798,YIGGLSTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11799 60.823 38.0 991200.0 25 0 85154.0 -1 MLMSFMPASAV 11 69 600.7744676227375 1199.5343823122748 2 600.7755004763603 MULTI CID FTMS 0 0 0 11795 1501793.5 0.6992012203716682 3 -0.1585578918457031 4 Oxidation (M) _MLM(Oxidation (M))SFMPASAV_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 9.38312468134398 0.8308777417566128 3 {M(Oxidation (M))|F}PVV 4 -1 39.073 0.0 0.0 3.2573 0.0 0.0 739.264452049025 0.0 739.264452049025 0.0 23.71157926182248 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 {M(Oxidation (M))|F}PVV 3.2573 - 121 1 1.377 30800.0 1.0 6410 5387 11795 HBL1_DMSO_200M_050219_1,11799 HBL1_DMSO_200M_050219_1,11799,MLMSFMPASAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11800 60.824 29.0 1886900.0 25 0 166770.0 + 6258 RAIENIDTL 9 87 522.7873351465752 0 522.7870361208916 PEAK CID FTMS 0 0 0 11795 1493619.0 1.0 0 0.0 5 Unmodified _DTPVRKDTL_ ENSG00000115685|ENST00000234038|PPP1R7;nc|ENSG00000115685|Q15435-4|PPP1R7;nc|ENSG00000115685|Q15435-3|PPP1R7;nc|ENSG00000115685|Q15435-5|PPP1R7;nc|ENSG00000115685|Q15435-2|PPP1R7 25.399314129420983 0.152124705672316 3 GD{I|L}NE 5 9 28.443 0.0 0.0 2.7256 0.0 0.0 175.11622195155024 337.20112024478755 512.3173421963378 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 GD{I|L}NE 2.7256 - 102 + 1 1.377 50087.9 1.0 6411 5387 11795 HBL1_DMSO_200M_050219_1,11800 HBL1_DMSO_200M_050219_1,11800,DTPVRKDTL False False RAIENIDTL 60.824396 522.787036120892 10052783.0 11795.0 ENSG00000115685|ENST00000234038|PPP1R7;;nc|ENSG00000115685|Q15435-4|PPP1R7;;nc|ENSG00000115685|Q15435-3|PPP1R7;;nc|ENSG00000115685|Q15435-5|PPP1R7;;nc|ENSG00000115685|Q15435-2|PPP1R7 5.770853678385417 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11801 60.826 42.0 1262600.0 25 0 96890.0 + 4585 DAYSKRFISV 10 84 593.3166375042628 1184.6187220753254 2 593.3165161013603 MULTI CID FTMS 0 0 0 11795 1214214.0 1.0 0 0.0 6 Unmodified _DAYSKRFISV_ ENSG00000186635|ENST00000393609|ARAP1;ENST00000465814.5_1_11:72407932-72423670:-|nuORF;nc|ENSG00000186635|Q96P48-1|ARAP1;nc|ENSG00000186635|Q96P48-2|ARAP1;nc|ENSG00000186635|Q96P48-3|ARAP1;nc|ENSG00000186635|Q96P48-4|ARAP1;nc|ENSG00000186635|Q96P48-7|ARAP1 27.128809495255545 0.3591624933674284 3 DAYSK 5 5 51.23 0.0 0.0 4.3246 0.0 0.0 0.0 617.3452852838499 617.3452852838499 32.54554718523508 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 + DAYSK 4.3246 + + 61 + 1 1.377 43761.5 1.0 6412 5387 11795 HBL1_DMSO_200M_050219_1,11801 HBL1_DMSO_200M_050219_1,11801,DAYSKRFISV False True DAYSKRFISV 60.825591 593.31651610136 7115600.5 11795.0 nc|ENSG00000186635|Q96P48-2|ARAP1;;ENSG00000186635|ENST00000393609|ARAP1;;nc|ENSG00000186635|Q96P48-7|ARAP1;;ENST00000465814.5_1_11:72407932-72423670:-|nuORF;;nc|ENSG00000186635|Q96P48-3|ARAP1;;nc|ENSG00000186635|Q96P48-1|ARAP1;;nc|ENSG00000186635|Q96P48-4|ARAP1 6.893827597300212 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11802 60.827 48.0 633960.0 25 0 44493.0 41367 VPKISELS 8 76 436.7563500384719 871.4981471437437 2 436.7567626833916 MULTI CID FTMS 0 0 0 11795 1193831.125 0.4369437409340335 -5 0.4309654235839844 7 Unmodified _VPKISELS_ ENSG00000112984|ENST00000394894|KIF20A;nc|ENSG00000112984|O95235-2|KIF20A 4.75600775471527 0.7954636275367004 3 {I|L} 1 7 11.259 0.0 0.0 1.2919 0.0 0.0 740.4028387714766 0.0 740.4028387714766 0.0 1.426178642403748 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2919 + + 21 + 1 1.377 29471.4 1.0 6413 5387 11795 HBL1_DMSO_200M_050219_1,11802 HBL1_DMSO_200M_050219_1,11802,VPKISELS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11803 60.828 45.0 591540.0 25 0 46894.0 + 43164 VYQTYVNAM 9 64 544.7582346892324 1087.501916445265 2 544.7588378787041 MULTI CID FTMS 0 0 0 11795 1134537.5 0.8074784480841258 2 -0.0750541687011718 8 Unmodified _VYQTYVNAM_ ENSG00000119203|ENST00000238112|CPSF3 26.88365393820708 0.1891292719743517 3 [YV]TQY 5 6 38.161 0.0 0.0 3.509 0.0 0.0 0.0 430.1782219474709 430.1782219474709 14.973024840566469 0.0 0.0 0.0 0 0.0 2.0 1.0 0.0 [YV]TQY 3.509 - 174 1 1.377 27685.6 1.0 6414 5387 11795 HBL1_DMSO_200M_050219_1,11803 HBL1_DMSO_200M_050219_1,11803,VYQTYVNAM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11804 60.829 47.0 1705300.0 25 0 210550.0 39524 VAVGHVKM 8 106 420.7435151090008 839.4724772848016 2 420.7435485720634 MULTI CID FTMS 0 0 0 11795 1042427.125 0.6040438273849448 -5 0.4309654235839844 9 Unmodified _VAVGHVKM_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000426688.1_1_1:81674334-81674790:+|nuORF;ENST00000462503.1_1_8:34180515-34180734:-|nuORF;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 6.354104778181461 0.7857632046190106 3 {I|L} 1 8 9.6777 0.0 0.0 1.1528 0.0 0.0 708.3770926185891 0.0 708.3770926185891 0.0 0.2137599021047531 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1528 - 17 + 1 1.377 69801.8 1.0 6415 5387 11795 HBL1_DMSO_200M_050219_1,11804 HBL1_DMSO_200M_050219_1,11804,VAVGHVKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11805 60.831 80.0 954340.0 25 0 116160.0 + 3110 AVPEAIPTP 9 91 447.7501709248364 893.4857889164728 2 447.7501098513603 MULTI CID FTMS 0 0 0 11795 1000797.375 0.9708193826082292 -5 0.4309654235839844 10 Unmodified _AVPEAIPTP_ ENSG00000171222|ENST00000305978|SCAND1 44.40701690623563 0.0526327925666318 3 [EP]A{I|L}G{I|L} 6 5 46.986 0.0 0.0 5.2588 0.0 0.0 0.0 310.14195281711653 310.14195281711653 23.0854562117252 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.7614393726401688 0.0 [EP]A{I|L}G{I|L} 5.2588 - 165 1 1.377 63182.4 1.0 6416 5387 11795 HBL1_DMSO_200M_050219_1,11805 HBL1_DMSO_200M_050219_1,11805,AVPEAIPTP True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11806 60.833 72.0 863150.0 25 0 176620.0 + 22057 LPPPPPPLA 9 68 449.7730721368604 897.5315913405208 2 449.7736083865166 MULTI CID FTMS 0 0 0 11795 906648.625 0.4944100671890749 -5 0.4309654235839844 11 Unmodified _LPPPPPPLA_ ENSG00000068489|ENST00000262293|PRR11 56.04830969593885 0.0282699710924866 3 [{I|L}P]PPPPW 7 3 60.221 0.0 0.0 6.7096 0.0 0.0 0.0 110.07377877728462 110.07377877728462 47.12221349969987 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 [{I|L}P]PPPPW 6.7096 - 180 1 1.377 52790.9 1.0 6417 5387 11795 HBL1_DMSO_200M_050219_1,11806 HBL1_DMSO_200M_050219_1,11806,LPPPPPPLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11807 60.835 109.0 573740.0 25 0 74661.0 + 10547 FVEPSRQFV 9 75 554.7926051542189 1107.5706573752375 2 554.7927734255791 MULTI CID FTMS 0 0 0 11795 571666.5 0.6068167388588613 -3 0.1702613830566406 12 Unmodified _FVEPSRQFV_ ENSG00000132432|ENST00000352861|SEC61G;ENST00000460484.5_1_7:54823470-54826890:-|nuORF 31.26834338654808 0.1333407332142048 3 PEVE 4 8 44.68 0.0 0.0 4.0341 0.0 0.0 635.3358631818375 0.0 635.3358631818375 0.0 32.461987796517704 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 PEVE 4.0341 - 36 1 1.377 55111.1 1.0 6418 5387 11795 HBL1_DMSO_200M_050219_1,11807 HBL1_DMSO_200M_050219_1,11807,FVEPSRQFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11808 60.839 174.0 599120.0 25 0 43308.0 21841 LPPAQVTVV 9 130 462.28161224181264 922.5486715504252 2 462.2823364138603 MULTI CID FTMS 0 0 0 11795 400202.0 0.5738246676521312 -5 0.4309654235839844 13 Unmodified _LPPAQVTVV_ ENSG00000165271|ENST00000297990|NOL6;ENST00000464829.5_1_9:33469994-33473843:-|nuORF;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-3|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6 28.486842064014134 0.1687311288560894 3 {[DS]|[MA]|[CV]|TT}N 3 8 20.942 0.0 0.0 2.27 0.0 0.0 0.0 603.4046645526315 603.4046645526315 1.8439314885706004 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DS]|[MA]|[CV]|TT}N 2.27 - 431 1 1.377 84278.7 1.0 6419 5387 11795 HBL1_DMSO_200M_050219_1,11808 HBL1_DMSO_200M_050219_1,11808,LPPAQVTVV False True AMNMGRPF 60.838548 462.28233641386 2712720.5 11795.0 nc|ENSG00000161813|Q71RC2-4|LARP4;;nc|ENSG00000161813|Q71RC2-3|LARP4;;nc|ENSG00000161813|Q71RC2-2|LARP4;;nc|ENSG00000161813|Q71RC2-5|LARP4;;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;;nc|ENSG00000161813|Q71RC2-6|LARP4;;nc|ENSG00000161813|Q71RC2-7|LARP4;;ENSG00000161813|ENST00000398473|LARP4 3.026774446169535 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11809 60.842 202.0 407520.0 25 0 67664.0 -1 TWGMCSNY 8 109 340.12937372602494 1017.3662917782748 3 340.1292602419853 MULTI CID FTMS 0 0 0 11795 384599.28125 1.0 0 0.0 14 Carbamidomethyl (C) _TWGMC(Carbamidomethyl (C))SNY_ ENST00000397292.7_1_9:26925840-26925921:-|nuORF 3.944395688203298 0.8003900995685364 3 Y 1 -1 13.495 0.0 0.0 1.3264 0.0 0.0 836.2916590651874 0.0 836.2916590651874 0.0 8.89075625191822 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3264 + + 11 + 1 1.377 70510.3 1.0 6420 5387 11795 HBL1_DMSO_200M_050219_1,11809 HBL1_DMSO_200M_050219_1,11809,TWGMCSNY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11810 60.844 57.0 538570.0 25 0 38995.0 27590 PLDKLYEV 8 65 488.7712667314 975.5279805296 2 488.7713195681572 MULTI CID FTMS 0 0 0 11795 359821.3125 1.0 0 0.0 15 Unmodified _PLDKLYEV_ ENSG00000145002|ENST00000262365|FAM86B2 5.760428011301431 0.7893668129297577 3 V 1 7 12.474 0.0 0.0 1.2787 0.0 0.0 858.4483658218837 0.0 858.4483658218837 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2787 + + 20 + 1 1.377 28645.5 1.0 6421 5387 11795 HBL1_DMSO_200M_050219_1,11810 HBL1_DMSO_200M_050219_1,11810,PLDKLYEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11811 60.846 95.0 324800.0 25 0 32280.0 + 21794 LPNGRVYYV 9 62 540.7951088527258 1079.5756647722517 2 540.7962524294853 MULTI CID FTMS 0 0 0 11795 334500.6875 1.0 0 0.0 16 Unmodified _LPNGRVYYV_ ENSG00000198373|ENST00000359154|WWP2;nc|ENSG00000198373|O00308-2|WWP2;nc|ENSG00000198373|O00308-4|WWP2 15.847184025352805 0.4077185912009129 3 {I|L}PN 3 6 45.234 0.0 0.0 4.19 0.0 0.0 0.0 752.3756807916624 752.3756807916624 33.4511352813191 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + {I|L}PN 4.19 + + 66 + 1 1.377 31123.9 1.0 6422 5387 11795 HBL1_DMSO_200M_050219_1,11811 HBL1_DMSO_200M_050219_1,11811,LPNGRVYYV False True LPNGRVYYV 60.8459 540.796252429485 2103318.5 11795.0 nc|ENSG00000198373|O00308-4|WWP2;;ENSG00000198373|ENST00000359154|WWP2;;nc|ENSG00000198373|O00308-2|WWP2 2.9945414066314697 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11812 60.85 188.0 460930.0 25 0 29265.0 + 15511 IPVEFQKTV 9 148 530.8062412901293 1059.5979296470584 2 530.8058349490166 MULTI CID FTMS 0 0 0 11795 324459.0 0.1848017124654538 -5 0.4309654235839844 17 Unmodified _IPVEFQKTV_ ENSG00000085365|ENST00000621999|SCAMP1;nc|ENSG00000085365|O15126-2|SCAMP1 45.69961567697781 0.0497987121815769 3 {I|L}PVE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KTV 9 0 + 57.212 0.0 0.0 5.3994 5.3994 82.723 0.0 0.0 0.0 23.746068678535792 6.368220975871736 6.368220975871736 6.368220975871736 0 0.3807196863200844 1.2218487496163564 0.9916440611282626 0.0 + + {I|L}PVE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KTV;{I|L}PVE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KS{I|L};{I|L}PVEV[YK]NV;{I|L}PVEV[YK]GGV;{I|L}PV{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KP]NV;{I|L}PV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}PV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KQ]C{I|L};{I|L}[KC]V{I|L}VE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}[{I|L}T]V[KT]E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}[{I|L}T][KT]VE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.3994;4.7984;4.7649;3.6697;2.8569;2.3021;1.7413;1.571;1.0725;0.65789 +;-;-;-;-;-;-;-;-;- + 1340 + 1 1.377 74886.2 1.0 6423 5387 11795 HBL1_DMSO_200M_050219_1,11812 HBL1_DMSO_200M_050219_1,11812,IPVEFQKTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11813 60.861 661.0 211300.0 25 0 19936.0 + 4891 DGHPVVVNI 9 183 475.2584487669071 948.5023446006142 2 475.2584106326103 MULTI CID FTMS 0 0 0 11795 225038.984375 0.4439343337592104 3 -0.1585578918457031 18 Unmodified _DGHPVVVNI_ ENSG00000105135|ENST00000263383|ILVBL 36.12702656103203 0.0967173616627612 3 {NN|[MP]|[D{I|L}]|[EV]}[YN]VVN{I|L} 8 4 + 47.026 0.0 0.0 4.9579 4.9579 82.528 0.0 0.0 0.0 6.593621306429327 27.852681171398324 6.593621306429327 7.950501111802907 0 0.8494850021680094 0.8860566476931632 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}[YN]VVN{I|L};[{I|L}A]P{[HG]|PP}EVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[YN]VVGG{I|L};[{I|L}P]A{[HG]|PP}EVN{I|L};[{I|L}P][HQ]EVN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[YD]|[{M(Oxidation (M))|F}M]}VVN{I|L};[YV]{[QD]|[EN]|[WG]|[KD]|[RS]}VVN{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD]VVN{I|L};[{I|L}A]P{[HG]|PP}EVGG{I|L};[{I|L}P]A{[HG]|PP}EVGG{I|L} 4.9579;4.1197;3.9814;3.8116;3.6316;3.5166;3.3931;3.1992;3.1489;2.8408 -;-;-;-;-;-;-;-;-;- 1063 1 1.377 107571.9 1.0 6424 5387 11795 HBL1_DMSO_200M_050219_1,11813 HBL1_DMSO_200M_050219_1,11813,DGHPVVVNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11814 60.863 92.0 466010.0 25 0 51332.0 + 10817 FYYAAKSL 8 77 481.7547097509694 961.4948665687388 2 481.7564269900322 MULTI CID FTMS 0 0 0 11795 181419.71875 0.7887769918673008 -3 0.1702613830566406 19 Unmodified _FYYAAKSL_ ENSG00000116191|ENST00000367635|RALGPS2;ENST00000478871.1_1_1:178863027-178885491:+|nuORF;nc|ENSG00000116191|Q86X27-3|RALGPS2 24.020572477871973 0.5389365498350341 3 [Y{M(Oxidation (M))|F}]YAAK{[TV]|[{I|L}S]} 8 0 + 29.258 0.0 0.0 3.0429 3.0429 77.936 0.0 0.0 0.0 13.438718088259805 3.4948500216800937 3.4948500216800937 8.937419785674283 0 0.3807196863200844 0.0 0.0 0.3054621874040891 + + [Y{M(Oxidation (M))|F}]YAAK{[TV]|[{I|L}S]};[Y{M(Oxidation (M))|F}]YA[K{I|L}]SA;EE{[QS]|[NT]}AAK{[TV]|[{I|L}S]};EE{[QS]|[NT]}A[K{I|L}]SA 3.0429;2.1134;1.6837;0.75412 +;-;-;- + 130 + 1 1.377 39277.7 1.0 6425 5387 11795 HBL1_DMSO_200M_050219_1,11814 HBL1_DMSO_200M_050219_1,11814,FYYAAKSL False True FYYAAKSL 60.863033 481.756426990032 1140084.875 11795.0 ENSG00000116191|ENST00000367635|RALGPS2;;ENST00000478871.1_1_1:178863027-178885491:+|nuORF;;nc|ENSG00000116191|Q86X27-3|RALGPS2 5.500082015991211 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11815 60.875 685.0 147740.0 25 0 10956.0 + 18501 KYPDYYQQI 9 140 609.2945278494476 1216.5745027656951 2 609.2950317263603 MULTI CID FTMS 0 0 0 11795 126664.609375 0.0788745494445208 -8 0.7606582641601562 20 Unmodified _KYPDYYQQI_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 55.50274090549119 0.0285720310785888 3 [DP]YYKYQQ{I|L} 9 4 + 61.203 0.0 0.0 5.0308 5.0308 74.606 0.0 0.0 0.0 8.54734259144628 42.80490986532714 8.54734259144628 1.2763625255165325 0 0.2887254899964357 0.744727494896694 0.0 0.5796896906561032 [DP]YYKYQQ{I|L};[DP]YKYYQQ{I|L};[DP]YYKY[AG]Q{I|L};[DP]YYKYQ[AG]{I|L};[DP]YKYYQ[AG]{I|L};[DP]YKYY[AG]Q{I|L};[AG]{I|L}Q[C(Carbamidomethyl (C))H]YQQ{I|L};[YK][DP]YYQQ{I|L};[EP]{[{M(Oxidation (M))|F}H]|[RQ]}RYQQ{I|L};[DP]YYKY[AG][AG]{I|L} 5.0308;4.9259;4.2739;4.2739;4.169;4.169;4.0199;4.0087;3.6057;3.5206 -;-;-;-;-;-;-;+;-;- + 1279 1 1.377 79075.9 1.0 6426 5387 11795 HBL1_DMSO_200M_050219_1,11815 HBL1_DMSO_200M_050219_1,11815,KYPDYYQQI True True KYPDYYQQI 60.874954 609.29503172636 33837556.0 11795.0 nc|ENSG00000163939|Q86U86-7|PBRM1;;ENSG00000163939|ENST00000707071|PBRM1;;nc|ENSG00000163939|Q86U86-8|PBRM1;;nc|ENSG00000163939|Q86U86-4|PBRM1;;nc|ENSG00000163939|Q86U86-5|PBRM1;;nc|ENSG00000163939|Q86U86|PBRM1;;nc|ENSG00000163939|Q86U86-2|PBRM1;;nc|ENSG00000163939|Q86U86-3|PBRM1;;nc|ENSG00000163939|Q86U86-6|PBRM1;;nc|ENSG00000163939|Q86U86-9|PBRM1 7.662508487701416 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11817 60.879 3.7 10123000.0 25 0 877200.0 + 41500 VPMTPLRTV 9 63 507.2945474146185 0 507.2946044802666 PEAK CID FTMS 0 0 0 11816 8527552.0 0.8846164299577897 1 -0.015594482421875 1 Unmodified _VPMTPLRTV_ ENSG00000107949|ENST00000278100|BCCIP 23.80106514851385 0.1666134462997421 3 PMT 3 6 28.94 0.0 0.0 2.8581 0.0 0.0 99.06738576603296 581.3421048667803 680.4094906328133 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 + PMT 2.8581 + + 17 + 1 1.377 39819.1 1.0 6427 5388 11816 HBL1_DMSO_200M_050219_1,11817 HBL1_DMSO_200M_050219_1,11817,VPMTPLRTV False True VPMTPLRTV 60.879143 507.294604480267 155781008.0 11816.0 ENSG00000107949|ENST00000278100|BCCIP 6.671319484710693 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11818 60.89 651.0 79381.0 25 0 5505.4 -1 NIRCDQQMLLY 11 103 727.3517944216728 0 727.3517944216728 PEAK CID FTMS 0 0 0 -1 0 2 Carbamidomethyl (C) _NIRC(Carbamidomethyl (C))DQQMLLY_ ENST00000399449.3_1_10:75479037-75482200:-|nuORF 8.155526934196011 0.4672964927559179 3 V 1 -1 15.485 0.0 0.0 1.0659 0.0 0.0 227.12742812324376 1123.4705355041488 1350.5979636273926 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 V 1.0659 - 85 1 1.377 43877.8 1.0 6428 5388 11816 HBL1_DMSO_200M_050219_1,11818 HBL1_DMSO_200M_050219_1,11818,NIRCDQQMLLY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11820 60.895 47.0 842140.0 25 0 73303.0 -1 PLHCNMTY 8 75 497.711168370842 993.407783808484 2 497.7109863162041 MULTI CID FTMS 0 0 0 11819 72214.1484375 0.0293692535031834 1 -0.0835037231445312 1 Oxidation (M) _PLHCNM(Oxidation (M))TY_ ENST00000478361.6_1_10:94234505-94239065:-|nuORF;ENST00000496903.5_1_10:94214203-94257457:-|nuORF 10.183394434864962 0.7604730176254005 3 DY 2 -1 17.959 0.0 0.0 1.8078 0.0 0.0 697.3064176969591 0.0 697.3064176969591 0.0 4.463950151760656 0.0 0.0 0 0.0 0.0 0.0 0.0 DY 1.8078 - 52 + 1 1.377 36077.5 1.0 6429 5389 11819 HBL1_DMSO_200M_050219_1,11820 HBL1_DMSO_200M_050219_1,11820,PLHCNMTY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11821 60.896 22.0 2356600.0 25 0 211570.0 + 16916 KIIYIVHDEV 10 84 410.2360413851291 1227.6862947555874 3 410.2359191775322 MULTI CID FTMS 0 0 0 11819 2896391.75 0.9615626965463288 -1 0.015594482421875 2 Unmodified _KIIYIVHDEV_ ENSG00000100567|ENST00000216455|PSMA3;nc|ENSG00000100567|P25788-2|PSMA3 47.7319792270244 0.0934623409360514 3 [HV]D{I|L}Y{I|L}{I|L}KEV 10 6 + 41.833 0.0 0.0 3.4074 3.4074 77.405 0.0 0.0 0.0 10.450352942388754 9.259687322722812 9.259687322722812 6.989700043360188 0 0.1989700043360188 1.0457574905606752 0.0 0.0 [HV]D{I|L}Y{I|L}{I|L}KEV;[HV]{I|L}DY{I|L}{I|L}KEV;[K{I|L}]{I|L}Y{I|L}V[HD]EV;[HD]V{I|L}Y{I|L}{I|L}KEV;[Y{I|L}]{I|L}K{I|L}V[HD]EV;[K{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HC]{I|L}KEV;[{M(Oxidation (M))|F}V]KKKV{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}] 3.4074;2.8381;2.5562;2.3104;1.8915;0.77867;0.61624 -;-;+;-;-;-;- + 366 1 1.377 48089.7 1.0 6430 5389 11819 HBL1_DMSO_200M_050219_1,11821 HBL1_DMSO_200M_050219_1,11821,KIIYIVHDEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11822 60.897 34.0 2928100.0 25 0 466720.0 -1 YDSEPDCF 8 83 516.6845281340258 1031.3545033348514 2 516.6848022341728 MULTI CID FTMS 0 0 0 11819 2288790.75 1.0 0 0.0 3 Carbamidomethyl (C) _YDSEPDC(Carbamidomethyl (C))F_ ENSG00000066933|ENST00000356056|MYO9A;nc|ENSG00000066933|B2RTY4-3|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A;nc|ENSG00000066933|B2RTY4-5|MYO9A 9.347437153973935 0.7675937258251505 3 YV 2 -1 37.474 0.0 0.0 3.6335 0.0 0.0 0.0 766.1997164361936 766.1997164361936 30.48455006504028 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 YV 3.6335 - 20 + 1 1.377 81307.8 1.0 6431 5389 11819 HBL1_DMSO_200M_050219_1,11822 HBL1_DMSO_200M_050219_1,11822,YDSEPDCF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11823 60.899 36.0 1237700.0 25 0 223970.0 41625 VPPPPAAA 8 75 360.20684867659014 718.3991444199803 2 360.2065307497978 MULTI CID FTMS 0 0 0 11819 1443291.125 0.1895922408441839 -3 0.1374626159667968 4 Unmodified _VPPPPAAA_ ENSG00000150990|ENST00000308736|DHX37 0.7936320650641473 0.8195151834710337 3 [VP]Y 3 6 10.458 0.0 0.0 1.4557 0.0 0.0 0.0 356.188458524168 356.188458524168 1.7731749024395782 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [VP]Y 1.4557 - 2 + 1 1.377 39891.8 1.0 6432 5389 11819 HBL1_DMSO_200M_050219_1,11823 HBL1_DMSO_200M_050219_1,11823,VPPPPAAA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11824 60.902 149.0 694130.0 25 0 79228.0 + -1 DAYENLTAKV 10 141 562.2872851909639 2245.120034897456 4 562.2845947146416 MULTI CID FTMS 0 0 0 11819 414544.5 0.8907691399621853 6 -0.4972152709960937 5 ENSG00000176022|ENST00000379198|B3GALT6 3 YEN{I|L}TKG{I|L} 8 -1 33.541 0.0 0.0 1.494 0.0 0.0 1308.625388241476 0.0 1308.625388241476 0.0 4.8693247816630105 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 YEN{I|L}TKG{I|L} 1.494 - 1217 + 1 1.377 80545.2 1.0 6433 5389 11819 HBL1_DMSO_200M_050219_1,11824 HBL1_DMSO_200M_050219_1,11824, False False DAYENLTAKV 60.90161 562.284594714642 5362575.5 11819.0 ENSG00000176022|ENST00000379198|B3GALT6 6.6413804690043134 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11825 60.912 584.0 440940.0 25 0 30710.0 + 4012 DALRSGLTV 9 247 466.2646017200684 930.5146505069368 2 466.2634765505791 MULTI CID FTMS 0 0 0 11819 273592.25 0.3128421495271466 14 -1.249675750732422 6 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 33.4449034751529 0.1114409586740657 3 {[DA]|[EG]}KVW{I|L}TV 8 4 + 44.622 0.0 0.0 4.7954 4.7954 72.575 0.0 0.0 0.0 0.5496174049863072 13.64474505521244 0.5496174049863072 0.5496174049863072 0 1.1549471895720984 1.0969100130080565 0.4337955442476158 0.0 {[DA]|[EG]}KVW{I|L}TV;{[TV]|[{I|L}S]}NVW{I|L}TV;[{I|L}P][YE]{I|L}PTV;[{I|L}T]AQW{I|L}TV;{[DA]|[EG]}KV{I|L}WTV;{[TV]|[{I|L}S]}NV{I|L}WTV;{NN|[MP]|[D{I|L}]|[EV]}[KG]W{I|L}TV;[{I|L}T]AQ{I|L}WTV;[{I|L}P][YE]P{I|L}TV;{[TV]|[{I|L}S]}GGVW{I|L}TV 4.7954;4.7364;4.576;4.5662;4.2108;4.1517;3.9976;3.9815;3.8433;3.741 -;-;-;-;-;-;-;-;-;- 3074 1 1.377 195500.0 1.0 6434 5389 11819 HBL1_DMSO_200M_050219_1,11825 HBL1_DMSO_200M_050219_1,11825,DALRSGLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11826 60.922 597.0 228990.0 25 0 23654.0 39664 VEDSSPDSEPV 11 167 580.7522007185423 1159.4898485038846 2 580.7525512576103 MULTI CID FTMS 0 0 0 11819 183318.90625 1.0 0 0.0 7 Unmodified _VEDSSPDSEPV_ ENSG00000115310|ENST00000337526|RTN4;nc|ENSG00000115310|Q9NQC3-4|RTN4;nc|ENSG00000115310|Q9NQC3-6|RTN4 9.38312468134398 0.8308777417566128 3 {NN|[MP]|[D{I|L}]|[EV]}D[KS]{I|L}{M(Oxidation (M))|F}{I|L} 8 7 34.364 0.0 0.0 2.9637 0.0 0.0 0.0 224.9812054583465 224.9812054583465 17.89150126325587 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.805462187404089 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}D[KS]{I|L}{M(Oxidation (M))|F}{I|L} 2.9637 - 545 1 1.377 104249.0 1.0 6435 5389 11819 HBL1_DMSO_200M_050219_1,11826 HBL1_DMSO_200M_050219_1,11826,VEDSSPDSEPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11827 60.934 659.0 207840.0 25 0 20089.0 + 37213 TIIEQVGKV 9 176 493.7983589176762 985.5821649021524 2 493.7970153689384 MULTI CID FTMS 0 0 0 11819 158416.28125 1.0 0 0.0 8 Unmodified _TIIEQVGKV_ ENSG00000172262|ENST00000682664|ZNF131;nc|ENSG00000172262|P52739-2|ZNF131 34.40172386719151 0.1061884637610825 3 [{I|L}T]{I|L}EQVGKV 9 0 + 64.161 0.0 0.0 6.5099 6.5099 89.349 0.0 0.0 0.0 50.66569691289537 12.007499097191284 12.007499097191284 9.208187539523747 0 0.4247425010840047 2.0 0.3252574989159953 0.3807196863200844 + + [{I|L}T]{I|L}EQVGKV;[{I|L}T]{I|L}E[AG]VGKV;[{I|L}T]{I|L}GW{[QV]|[N{I|L}]|[RA]|[KV]}AV;{[QN]|[E{I|L}]|[KN]}[R{I|L}]{M(Oxidation (M))|F}{I|L}PV;[{I|L}T]{I|L}GW{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L};{[TV]|[{I|L}S]}P[{I|L}T]{M(Oxidation (M))|F}{I|L}PV;[{I|L}T]{I|L}HH[RP]{I|L};[{I|L}T]{I|L}HH[R{I|L}]P;{[QN]|[E{I|L}]|[KN]}QS[R{I|L}][K{I|L}];[{I|L}T][TA]VVTG[KP] 6.5099;5.5756;3.356;3.3017;2.9702;2.6448;2.346;1.726;1.5292;1.3196 +;-;-;-;-;-;-;-;-;- + 2093 + 1 1.377 106195.1 1.0 6436 5389 11819 HBL1_DMSO_200M_050219_1,11827 HBL1_DMSO_200M_050219_1,11827,TIIEQVGKV True True TIIEQVGKV 60.933739 493.797015368938 1348709.0 11819.0 ENSG00000172262|ENST00000682664|ZNF131;;nc|ENSG00000172262|P52739-2|ZNF131 5.68571678797404 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11828 60.948 800.0 363350.0 25 0 21395.0 -1 0 282 333.6986946813787 0 333.6987487673759 PEAK CID FTMS 0 0 0 11819 165701.65625 0.2924992326826232 -3 0.1374626159667968 9 3 {I|L}WV 3 -1 7.167 0.0 0.0 1.0771 0.0 0.0 148.07735390985405 116.051095830725 264.128449740579 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}WV 1.0771 - 22 + 1 1.377 229389.7 0.8600000143051147 6437 5389 11819 HBL1_DMSO_200M_050219_1,11828 HBL1_DMSO_200M_050219_1,11828, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11829 60.961 800.0 30657.0 25 0 2653.9 -1 0 43 1066.4440197006245 2130.873486468049 2 1066.944262683392 MULTI CID FTMS 0 0 0 11819 118660.75 1.0 0 0.0 10 3 C(Carbamidomethyl (C)) 1 -1 3.9794 0.0 0.0 0.18675 0.0 0.0 1705.0451306104303 262.7757357233032 1967.8208663337327 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.18675 - 2 + 1 1.377 24214.5 0.959999978542328 6438 5389 11819 HBL1_DMSO_200M_050219_1,11829 HBL1_DMSO_200M_050219_1,11829, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11830 60.974 727.0 173850.0 25 0 20589.0 + 2323 AQIPPIEKMDA 11 156 606.8182418898784 1211.6219308465568 2 606.8196288943291 MULTI CID FTMS 0 0 0 11819 90946.859375 0.5291887090024374 -3 0.1374626159667968 11 Unmodified _AQIPPIEKMDA_ ENSG00000119661|ENST00000553645|DNAL1 22.48609341952514 0.5642223135719058 3 [QA]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}MKE 8 7 37.814 0.0 0.0 3.1209 0.0 0.0 0.0 304.16730676822505 304.16730676822505 27.217728265598726 0.0 0.0 0.0 0 1.0 0.6777807052660807 0.8807196863200843 0.0 [QA]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}MKE 3.1209 - 774 + 1 1.377 92978.8 1.0 6439 5389 11819 HBL1_DMSO_200M_050219_1,11830 HBL1_DMSO_200M_050219_1,11830,AQIPPIEKMDA False True AQIPPIEKMDA 60.974024 606.819628894329 1755722.0 11819.0 ENSG00000119661|ENST00000553645|DNAL1 5.613239447275798 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11832 60.978 6.4 6029500.0 25 0 1000100.0 + 16914 KIIYIVHDEV 10 65 614.8505688347162 1227.6865847362324 2 614.8508178591728 MULTI CID FTMS 0 0 0 11831 7003491.5 1.0 0 0.0 1 Unmodified _KIIYIVHDEV_ ENSG00000100567|ENST00000216455|PSMA3;nc|ENSG00000100567|P25788-2|PSMA3 42.83518252547288 0.1276281763412153 3 K{I|L}{I|L}Y{I|L}V 6 4 62.696 0.0 0.0 5.1068 0.0 0.0 0.0 495.1864412897094 495.1864412897094 36.04039720691517 0.0 0.0 0.0 0 1.1549471895720984 1.0 0.0 0.0 + K{I|L}{I|L}Y{I|L}V 5.1068 + + 193 + 1 1.377 36476.8 1.0 6440 5390 11831 HBL1_DMSO_200M_050219_1,11832 HBL1_DMSO_200M_050219_1,11832,KIIYIVHDEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11833 60.979 22.0 1825200.0 25 0 141910.0 + 22113 LPPPVQTQI 9 83 496.7924844808842 991.5704160285684 2 496.7925903201103 MULTI CID FTMS 0 0 0 11831 2303397.5 0.3193524406142321 12 -1.0225486755371094 2 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 26.34127834903884 0.1960301806784604 3 [{I|L}P]NPP{I|L} 6 5 36.375 0.0 0.0 3.6684 0.0 0.0 0.0 357.174516940931 357.174516940931 15.472287753157516 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P]NPP{I|L} 3.6684 - 373 1 1.377 34624.2 1.0 6441 5390 11831 HBL1_DMSO_200M_050219_1,11833 HBL1_DMSO_200M_050219_1,11833,LPPPVQTQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11834 60.981 43.0 1788200.0 25 0 268940.0 -1 0 98 346.70820727053183 691.4018616078637 2 346.7079955935478 MULTI CID FTMS 0 0 0 11831 1374892.875 0.1209865949607576 -2 0.0990982055664062 3 3 [R{M(Oxidation (M))|F}]GVT{I|L} 6 -1 + 39.645 0.0 0.0 5.734 5.734 78.44 0.0 0.0 0.0 5.520468848809372 25.58271822931428 5.520468848809372 2.1091782158466543 0 0.9247425010840048 0.0 0.3807196863200844 0.6747425010840047 [R{M(Oxidation (M))|F}]GVT{I|L};[R{M(Oxidation (M))|F}]KE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[R{M(Oxidation (M))|F}]{I|L} 5.734;5.429;1.8906 -;-;- 219 1 1.377 65692.7 1.0 6442 5390 11831 HBL1_DMSO_200M_050219_1,11834 HBL1_DMSO_200M_050219_1,11834, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11835 60.982 44.0 1333300.0 25 0 158760.0 41376 VPKTPVEI 8 87 441.7680744852922 881.5215960373844 2 441.7682678103447 MULTI CID FTMS 0 0 0 11831 1170847.75 0.6255478847113861 -2 0.0990982055664062 4 Unmodified _VPKTPVEI_ ENST00000529587.1_1_11:9806704-9806878:-|nuORF 20.453626601364224 0.6087503291685402 3 VP 2 6 45.217 0.0 0.0 5.1294 0.0 0.0 0.0 682.3788397277655 682.3788397277655 23.076512587389644 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VP 5.1294 + + 127 + 1 1.377 50914.9 1.0 6443 5390 11831 HBL1_DMSO_200M_050219_1,11835 HBL1_DMSO_200M_050219_1,11835,VPKTPVEI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11836 60.983 46.0 1124300.0 25 0 95016.0 + 38226 TPRVIIQTV 9 87 513.8189319094855 1025.623310885771 2 513.8189575076103 MULTI CID FTMS 0 0 0 11831 1132772.0 0.2451872851406187 -2 0.0990982055664062 5 Unmodified _TPRVIIQTV_ ENSG00000135164|ENST00000331242|DMTF1;ENST00000425406.5_1_7:86817376-86824453:+|nuORF;ENST00000447863.5_1_7:86811523-86824453:+|nuORF;ENST00000547146.6_1_7:86813892-86824453:+|nuORF;nc|ENSG00000135164|Q9Y222-5|DMTF1 22.65808497894818 0.2428932432760099 3 {[TV]|[{I|L}S]}[RP]{I|L}{I|L}QTV 9 2 + 54.671 0.0 0.0 5.3305 5.3305 85.54 0.0 0.0 0.0 10.915149811213496 28.244171855527966 10.915149811213496 9.208187539523747 0 0.8807196863200843 1.3010299956639813 0.0 0.0 {[TV]|[{I|L}S]}[RP]{I|L}{I|L}QTV;{[TV]|[{I|L}S]}[RP]{I|L}{I|L}[AG]TV;{[TV]|[{I|L}S]}Q[R{I|L}][{I|L}P]TV;[R{I|L}][PS]{I|L}{I|L}QTV;[R{I|L}][PS]{I|L}{I|L}[AG]TV;[Q{I|L}]S[R{I|L}][{I|L}P]TV;[R{I|L}][R{I|L}]P{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;[R{I|L}][RP]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}V 5.3305;4.4327;3.8181;3.674;2.7762;1.8681;0.84843;0.46044 -;-;-;-;-;-;-;- 261 1 1.377 42604.6 1.0 6444 5390 11831 HBL1_DMSO_200M_050219_1,11836 HBL1_DMSO_200M_050219_1,11836,TPRVIIQTV False True TPRVIIQTV 60.983078 513.81895750761 22194106.0 11831.0 ENST00000447863.5_1_7:86811523-86824453:+|nuORF;;ENST00000425406.5_1_7:86817376-86824453:+|nuORF;;ENST00000547146.6_1_7:86813892-86824453:+|nuORF;;nc|ENSG00000135164|Q9Y222-5|DMTF1;;ENSG00000135164|ENST00000331242|DMTF1 4.829538504282634 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11837 60.984 30.0 1423400.0 25 0 126240.0 + 40229 VGRWAGPL 8 85 428.2453654474736 0 428.2481262087822 PEAK CID FTMS 0 0 0 11831 1308426.75 1.0 0 0.0 6 Unmodified _VGRWAGPL_ REV__ENSG00000108576|ENST00000650711|SLC6A4;REV__nc|ENSG00000108576|P31645-2|SLC6A4 14.581692164780916 0.4900557725783909 3 AA{I|L}AE 5 -1 13.633 0.0 0.0 1.5955 0.0 0.0 285.1596018892846 111.05689417056874 396.2164960598533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 AA{I|L}AE 1.5955 - 99 + 1 1.377 39454.2 1.0 6445 5390 11831 HBL1_DMSO_200M_050219_1,11837 HBL1_DMSO_200M_050219_1,11837,VGRWAGPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11838 60.986 89.0 950660.0 25 0 82347.0 + 21119 LPAPIEKTI 9 110 491.3023521134498 980.5901512936996 2 491.3030578494072 MULTI CID FTMS 0 0 0 11831 630645.0 0.1783811453891403 -7 0.4827308654785156 7 Unmodified _LPAPIEKTI_ nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 27.628801355627647 0.1796483985696185 3 {I|L}PA[{I|L}P]EKT{I|L} 9 0 + 35.986 0.0 0.0 3.6698 3.6698 84.15 0.0 0.0 0.0 14.27862412205127 19.146110665711586 14.27862412205127 35.985586393741016 0 0.7742275032520141 1.5228787452803376 0.5021934810768762 0.0 + + {I|L}PA[{I|L}P]EKT{I|L} 3.6698 + + 387 + 1 1.377 72248.2 1.0 6446 5390 11831 HBL1_DMSO_200M_050219_1,11838 HBL1_DMSO_200M_050219_1,11838,LPAPIEKTI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11839 60.996 570.0 234140.0 25 0 62556.0 -1 0 65 1190.498983367263 3568.475120701989 3 1190.835253894329 MULTI CID FTMS 0 0 0 11831 487380.0 0.3375607206981643 3 -0.256805419921875 8 3 C(Carbamidomethyl (C))YY 3 -1 13.188 0.0 0.0 0.36956 0.0 0.0 1312.4654527428654 1766.850322359017 3079.315775101882 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))YY 0.36956 - 64 + 1 1.377 113018.5 1.0 6447 5390 11831 HBL1_DMSO_200M_050219_1,11839 HBL1_DMSO_200M_050219_1,11839, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11840 61.005 488.0 378450.0 25 0 20487.0 + 14135 IAYDRYIKEV 10 154 423.8992313251161 1268.6758645755483 3 423.8993713259697 MULTI CID FTMS 0 0 0 11831 455015.03125 0.5291389289767838 -2 0.0990982055664062 9 Unmodified _IAYDRYIKEV_ ENSG00000163950|ENST00000489418|SLBP;nc|ENSG00000163950|Q14493-2|SLBP 28.181266145913348 0.3355154477840527 3 {I|L}AV{M(Oxidation (M))|F}K{I|L}YSTEV 11 6 + 61.642 0.0 0.0 4.8588 4.8588 78.731 0.0 0.0 0.0 24.52430929314037 4.482621286156068 4.482621286156068 4.351029889834756 0 0.5484550065040281 1.6989700043360187 1.0 0.0 {I|L}AV{M(Oxidation (M))|F}K{I|L}YSTEV;{I|L}AV{M(Oxidation (M))|F}KMGY{I|L}EV;{I|L}AV{M(Oxidation (M))|F}K{I|L}YNK{[CA]|SS};{I|L}AV{M(Oxidation (M))|F}K{I|L}Y{[WT]|[RM]}E;{I|L}AV{M(Oxidation (M))|F}KMGV{[QN]|[E{I|L}]|[KN]}Y;{I|L}AV{M(Oxidation (M))|F}K{I|L}YSTD{I|L};{I|L}AV{M(Oxidation (M))|F}VV{[YC]|[HE]}KEV;{I|L}AV{M(Oxidation (M))|F}Y[K{I|L}]STEV;{I|L}AV{M(Oxidation (M))|F}K{I|L}YSTVE;{I|L}AV{M(Oxidation (M))|F}K{I|L}{[CA]|SS}{[QN]|[E{I|L}]|[KN]}Y 4.8588;4.5158;4.3451;4.3102;4.2373;4.2315;4.1384;4.0927;4.0881;3.9921 -;-;-;-;-;-;-;-;-;- 5867 + 1 1.377 170110.7 1.0 6448 5390 11831 HBL1_DMSO_200M_050219_1,11840 HBL1_DMSO_200M_050219_1,11840,IAYDRYIKEV False True IAYDRYIKEV 61.004851 423.89937132597 5575763.0 11831.0 ENSG00000163950|ENST00000489418|SLBP;;nc|ENSG00000163950|Q14493-2|SLBP 3.807472308476766 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11841 61.008 189.0 868180.0 25 0 71229.0 + 45194 YQTEIGQTL 9 174 526.7662552921945 1051.517957651189 2 526.7665283083916 MULTI CID FTMS 0 0 0 11831 349130.75 0.0294809877887178 -2 0.0990982055664062 10 Unmodified _YQTEIGQTL_ ENSG00000160752|ENST00000368356|FDPS;ENST00000453932.1_1_7:76099481-76100288:-|nuORF;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS 69.10491478415734 0.0214449631113747 3 [AG]YTE{I|L}GQT{I|L} 10 3 + 54.157 0.0 0.0 5.1504 5.1504 75.011 0.0 0.0 0.0 1.0438519347333397 4.8900380726086965 1.0438519347333397 1.2833698907375677 0 0.7742275032520141 1.2218487496163564 2.018930178484529 0.0 [AG]YTE{I|L}GQT{I|L};[{I|L}T]QGEYQT{I|L};[YQ]TE{I|L}GQT{I|L};[{I|L}T]EGQYQT{I|L};[{I|L}T]E[YQ]GQT{I|L};[AG]YTE{I|L}G[AG]T{I|L};[{I|L}T]Q[YE]GQT{I|L};[{I|L}T]QGEY[AG]T{I|L};[YQ]TE{I|L}G[AG]T{I|L};[AG]TYE{I|L}GQT{I|L} 5.1504;5.0283;4.9946;4.5291;4.4369;4.2788;4.2715;4.1526;4.1189;4.0696 -;-;+;-;-;-;-;-;-;- + 5397 1 1.377 128729.5 1.0 6449 5390 11831 HBL1_DMSO_200M_050219_1,11841 HBL1_DMSO_200M_050219_1,11841,YQTEIGQTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11842 61.013 261.0 1292600.0 25 0 209280.0 + 10082 FPSEIVGKRI 10 187 382.5606204105771 1144.6600318319313 3 382.5606567263603 MULTI CID FTMS 0 0 0 11831 325012.78125 0.0385331768572438 -2 0.0990982055664062 11 Unmodified _FPSEIVGKRI_ ENSG00000171863|ENST00000645674|RPS7;ENST00000415804.2_1_4:4509290-4509386:+|nuORF;ENST00000426405.1_1_X:73629614-73629932:+|nuORF;ENST00000463499.1_1_4:42474097-42474295:+|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF 85.76441949171179 0.012343647646002 3 {M(Oxidation (M))|F}PSE{I|L}VGK{I|L}R 10 2 + 81.059 0.0 0.0 7.0815 7.0815 81.891 0.0 0.0 0.0 6.831757371527857 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 1.0941876774005248 0.0 1.1237125054200234 0.91944517631652 {M(Oxidation (M))|F}PSE{I|L}VGK{I|L}R;{M(Oxidation (M))|F}PSE{I|L}VGKR{I|L};{M(Oxidation (M))|F}PSE{I|L}V{I|L}[KG]R;{M(Oxidation (M))|F}PS{I|L}EVGK{I|L}R;{M(Oxidation (M))|F}PS{I|L}EVGKR{I|L};{M(Oxidation (M))|F}P{I|L}SEVGK{I|L}R;{M(Oxidation (M))|F}PSE{I|L}{I|L}V[KG]R;{M(Oxidation (M))|F}PS{I|L}EV{I|L}[KG]R;{M(Oxidation (M))|F}P{I|L}SEVGKR{I|L};{M(Oxidation (M))|F}P{I|L}SEV{I|L}[KG]R 7.0815;6.9276;6.5293;6.4859;6.332;6.016;5.9795;5.9337;5.8621;5.4638 -;+;-;-;-;-;-;-;-;- + 956 + 1 1.377 275726.5 1.0 6450 5390 11831 HBL1_DMSO_200M_050219_1,11842 HBL1_DMSO_200M_050219_1,11842,FPSEIVGKRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11843 61.025 663.0 189490.0 25 0 33097.0 -1 0 66 1082.094016675227 3243.2602206258816 3 1082.762866199017 MULTI CID FTMS 0 0 0 11831 292933.53125 0.2191691222015109 -2 0.0990982055664062 12 3 RHMT{M(Oxidation (M))|F} 5 -1 20.222 0.0 0.0 0.6235 0.0 0.0 2147.7497022182715 420.1895235651001 2567.9392257833715 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 RHMT{M(Oxidation (M))|F} 0.6235 - 280 + 1 1.377 110038.3 1.0 6451 5390 11831 HBL1_DMSO_200M_050219_1,11843 HBL1_DMSO_200M_050219_1,11843, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11844 61.028 169.0 270870.0 25 0 17208.0 44654 YPFKPPKV 8 80 488.2869567505858 974.5593605679716 2 488.2867614626884 MULTI CID FTMS 0 0 0 11831 267781.40625 0.0078911675922782 25 -2.150672912597656 13 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 19.438996006549623 0.6237395211498085 3 YP 2 6 34.57 0.0 0.0 3.5472 0.0 0.0 0.0 711.4172457330686 711.4172457330686 22.57999250452839 0.0 0.0 0.0 0 0.2887254899964357 1.2218487496163564 0.0 0.0 + YP 3.5472 + + 62 + 1 1.377 40987.4 1.0 6452 5390 11831 HBL1_DMSO_200M_050219_1,11844 HBL1_DMSO_200M_050219_1,11844,YPFKPPKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11845 61.03 97.0 292920.0 25 0 26863.0 + -1 PYYKRKCG 8 74 536.2744752935283 1070.5343976538566 2 537.2762328982353 MULTI CID FTMS 0 0 0 11831 200777.09375 0.6283793940888863 -2 0.0990982055664062 14 Carbamidomethyl (C) _PYYKRKC(Carbamidomethyl (C))G_ REV__ENSG00000188483|ENST00000372491|IER5L 6.354104778181461 0.7857632046190106 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y 3 -1 22.932 0.0 0.0 2.1421 0.0 0.0 0.0 644.3310950017659 644.3310950017659 12.0943695775384 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y 2.1421 + + 44 1 1.377 32446.5 1.0 6453 5390 11831 HBL1_DMSO_200M_050219_1,11845 HBL1_DMSO_200M_050219_1,11845,PYYKRKCG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11846 61.045 800.0 189130.0 25 0 27222.0 -1 0 157 403.06599328852514 2412.352300931551 6 403.2332336306572 MULTI CID FTMS 0 0 0 11831 199183.4375 0.6937621089753357 4 -0.3597526550292969 15 3 V 1 -1 9.5329 0.0 0.0 0.39517 0.0 0.0 2295.2728388117253 0.0 2295.2728388117253 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.39517 - 64 + 1 1.377 124838.4 0.9900000095367432 6454 5390 11831 HBL1_DMSO_200M_050219_1,11846 HBL1_DMSO_200M_050219_1,11846, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11847 61.058 734.0 404180.0 25 0 53465.0 + 36257 SYFDPREAY 9 180 574.2560485120576 1146.4975440909152 2 574.2559081912041 MULTI CID FTMS 0 0 0 11831 183939.109375 0.1990412120590731 -2 0.0990982055664062 16 Unmodified _SYFDPREAY_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029999-157030212:-|nuORF 24.020572477871973 0.2255576514309169 3 [PS]E{I|L}[HA]D{M(Oxidation (M))|F}[MT] 10 9 + 37.512 0.0 0.0 3.2718 3.2718 75.481 0.0 0.0 0.0 5.384694206467344 5.764837301042714 5.384694206467344 5.384694206467344 0 0.7302046884880937 0.721246399047171 0.7644979867444217 0.0 [PS]E{I|L}[HA]D{M(Oxidation (M))|F}[MT];[DV]{I|L}[SG]YD{M(Oxidation (M))|F}[MT];{[QN]|[E{I|L}]|[KN]}[QT]YD{M(Oxidation (M))|F}[MT];{[QN]|[E{I|L}]|[KN]}SAAYD{M(Oxidation (M))|F}[MT];{NN|[MP]|[D{I|L}]|[EV]}V[SG]YD{M(Oxidation (M))|F}[MT];{[QN]|[E{I|L}]|[KN]}SP[HA]D{M(Oxidation (M))|F}[MT];{[ES]|[DT]|[{I|L}C]}P{I|L}[HA]D{M(Oxidation (M))|F}[MT];{NN|[MP]|[D{I|L}]|[EV]}TAAYD{M(Oxidation (M))|F}[MT];{[TV]|[{I|L}S]}[RD]YD{M(Oxidation (M))|F}[MT];{NN|[MP]|[D{I|L}]|[EV]}TP[HA]D{M(Oxidation (M))|F}[MT] 3.2718;2.8022;2.6989;2.5315;2.5087;2.3546;2.3169;2.0342;1.9885;1.8572 -;-;-;-;-;-;-;-;-;- 2053 1 1.377 223706.8 1.0 6455 5390 11831 HBL1_DMSO_200M_050219_1,11847 HBL1_DMSO_200M_050219_1,11847,SYFDPREAY False True SYFDPREAY 61.058038 574.255908191204 6755707.0 11831.0 ENST00000379752.5_1_1:157029999-157030212:-|nuORF;;ENSG00000122692|ENST00000397149|SMU1 8.048011461893717 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11848 61.071 749.0 379730.0 25 0 16944.0 + 44829 YPNRGFPKI 9 252 546.303640301376 1090.592727669552 2 546.3027831912041 MULTI CID FTMS 0 0 0 11831 191468.734375 0.3807508404701077 -2 0.0990982055664062 17 Unmodified _YPNRGFPKI_ ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR 58.6788170122104 0.0268135626297836 3 {I|L}YP{I|L}{[ES]|[DT]|[{I|L}C]}EK{I|L} 9 6 + 42.634 0.0 0.0 3.9093 3.9093 72.785 0.0 0.0 0.0 15.15980753896376 11.315466624159823 11.315466624159823 2.2969624387961574 0 0.6989700043360187 0.0 1.7034021960761263 0.3494850021680094 {I|L}YP{I|L}{[ES]|[DT]|[{I|L}C]}EK{I|L};YP{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}EK{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}EK{I|L};{[QN]|[E{I|L}]|[KN]}KC(Carbamidomethyl (C))G{M(Oxidation (M))|F}PK{I|L};{[QN]|[E{I|L}]|[KN]}S{[QN]|[E{I|L}]|[KN]}YPK{I|L};{[QN]|[E{I|L}]|[KN]}K[NS]YPK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RN]G{M(Oxidation (M))|F}PK{I|L};{[QN]|[E{I|L}]|[KN]}KGC(Carbamidomethyl (C)){M(Oxidation (M))|F}PK{I|L};Y{I|L}P{I|L}{[ES]|[DT]|[{I|L}C]}EK{I|L};{[QN]|[E{I|L}]|[KN]}KGCG{M(Oxidation (M))|F}PK{I|L} 3.9093;3.6986;3.5497;3.4132;3.4032;3.35;3.3274;3.3243;3.3128;3.0952 -;-;-;-;-;-;+;-;-;- + 7907 + 1 1.377 216796.1 1.0 6456 5390 11831 HBL1_DMSO_200M_050219_1,11848 HBL1_DMSO_200M_050219_1,11848,YPNRGFPKI True True YPNRGFPKI 61.071013 546.302783191204 4588491.0 11831.0 ENSG00000116984|ENST00000366577|MTR;;nc|ENSG00000116984|Q99707-2|MTR 3.827256997426351 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11849 61.086 800.0 176380.0 25 0 12162.0 23453 LTGEMDTFSTV 11 197 400.8523456005617 1199.535207401885 3 400.8521911501884 MULTI CID FTMS 0 0 0 11831 165145.78125 0.2199860665271709 5 -0.4137115478515625 18 Unmodified _LTGEMDTFSTV_ ENSG00000141252|ENST00000437048|VPS53;ENST00000572607.1_1_17:454958-465900:-|nuORF;nc|ENSG00000141252|Q5VIR6-1|VPS53;nc|ENSG00000141252|Q5VIR6-2|VPS53;nc|ENSG00000141252|Q5VIR6-3|VPS53 9.38312468134398 0.8308777417566128 3 [{I|L}T]WV[DG]AE{I|L}T 10 7 46.978 0.0 0.0 3.9163 0.0 0.0 0.0 110.96030372313696 110.96030372313696 32.99832993881884 0.0 0.0 0.0 0 0.0 2.0 0.7134679910804405 0.0 [{I|L}T]WV[DG]AE{I|L}T 3.9163 - 956 1 1.377 107488.9 0.9100000262260436 6457 5390 11831 HBL1_DMSO_200M_050219_1,11849 HBL1_DMSO_200M_050219_1,11849,LTGEMDTFSTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11850 61.1 800.0 54366.0 25 0 9460.6 -1 0 36 1118.1105562118296 3351.3098392356887 3 1118.447924792767 MULTI CID FTMS 0 0 0 11831 145030.921875 1.0 0 0.0 19 3 CVS 3 -1 8.6721 0.0 0.0 0.25877 0.0 0.0 2148.750463790944 910.4035738580686 3059.154037649012 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 CVS 0.25877 - 9 + 1 1.377 42211.2 0.6200000047683716 6458 5390 11831 HBL1_DMSO_200M_050219_1,11850 HBL1_DMSO_200M_050219_1,11850, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11851 61.114 800.0 206950.0 25 0 16290.0 + 21389 LPFVLWGL 8 201 472.7825928109584 0 472.7564575076103 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _LPFVLWGL_ REV__ENST00000548984.1_1_12:53691573-53691735:+|nuORF;REV__ENST00000552341.5_1_12:53691573-53693126:+|nuORF 17.086550045450526 0.4618975036900928 3 KT 2 -1 11.211 0.0 0.0 1.1882 0.0 0.0 472.28483073605184 239.1039980524047 711.3888287884565 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 KT 1.1882 - 158 + 1 1.377 129630.2 0.6700000166893005 6459 5390 11831 HBL1_DMSO_200M_050219_1,11851 HBL1_DMSO_200M_050219_1,11851,LPFVLWGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11853 61.118 25.0 807270.0 25 0 67349.0 + 43103 VYNYAEQTL 9 49 550.7665371764102 1099.5185214196204 2 550.7668945193291 MULTI CID FTMS 0 0 0 11852 1636417.375 0.1592987749972499 4 -0.2738380432128906 1 Unmodified _VYNYAEQTL_ ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 16.942295170755138 0.3780752226737986 3 [YV]NY 4 5 27.167 0.0 0.0 2.4708 0.0 0.0 0.0 557.2532375663578 557.2532375663578 13.187587626244124 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [YV]NY 2.4708 + + 49 1 1.374 25131.9 1.0 6460 5391 11852 HBL1_DMSO_200M_050219_1,11853 HBL1_DMSO_200M_050219_1,11853,VYNYAEQTL False True VYNYAEQTL 61.118113 550.766894519329 127388592.0 11852.0 ENSG00000173933|ENST00000310092|RBM4;;nc|ENSG00000239306|Q96PK6-5|RBM14 6.426838556925456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11854 61.12 57.0 1157000.0 25 0 158530.0 + 42921 VVRAAGHN 8 83 412.2303899297853 822.4462269263706 2 412.2302734255791 MULTI CID FTMS 0 0 0 11852 1368299.5 0.5126133154757166 4 -0.2738380432128906 2 Unmodified _VVRAAGHN_ REV__ENST00000503671.2_1_4:110737056-110740318:+|nuORF 0.7936320650641473 0.8195151834710337 3 Q 1 -1 0.71334 0.0 0.0 0.086734 0.0 0.0 496.25153806093937 195.1143740289672 691.3659120899066 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.086734 - 5 + 1 1.374 57105.3 1.0 6461 5391 11852 HBL1_DMSO_200M_050219_1,11854 HBL1_DMSO_200M_050219_1,11854,VVRAAGHN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11855 61.121 45.0 963740.0 25 0 84470.0 + 22148 LPPSALQSV 9 73 456.26343039887297 910.512307864546 2 456.2642089724541 MULTI CID FTMS 0 0 0 11852 1445139.25 0.4994788811645135 -1 0.1398735046386718 3 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 34.10243960390752 0.1078313939113124 3 [{I|L}P]{[SA]|[TG]}PGA{I|L}SV 10 4 + 40.569 0.0 0.0 4.4556 4.4556 53.871 0.0 0.0 0.0 13.61818737241734 13.556518697048716 13.556518697048716 0.0 0 0.7742275032520141 1.6989700043360187 0.3494850021680094 0.0 [{I|L}P]{[SA]|[TG]}PGA{I|L}SV;[{I|L}P]{[SA]|[TG]}P{I|L}QSV;[{I|L}P]{[SA]|[TG]}PQ{I|L}SV;[{I|L}P]{[SA]|[TG]}P{I|L}[AG]SV;[AG]{I|L}VP{I|L}Q[DV];[Q{I|L}]VP{I|L}Q[DV];[AG]{I|L}VP{I|L}[AG][DV];[Q{I|L}]VP{I|L}[AG][DV] 4.4556;4.4556;4.2622;3.4443;1.5143;1.0503;0.50298;0.033017 -;-;-;-;-;-;-;- 193 1 1.374 39707.4 1.0 6462 5391 11852 HBL1_DMSO_200M_050219_1,11855 HBL1_DMSO_200M_050219_1,11855,LPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11856 61.123 79.0 462800.0 25 0 44103.0 + 42612 VTSPVAVLS 9 70 436.7563500384719 871.4981471437437 2 436.7568847537041 MULTI CID FTMS 0 0 0 11852 1335555.25 0.4888149545934215 -1 0.1398735046386718 4 Unmodified _VTSPVAVLS_ REV__ENSG00000078304|ENST00000694906|PPP2R5C;REV__ENST00000556068.5_1_14:102228230-102284455:+|nuORF;REV__nc|ENSG00000078304|Q13362-4|PPP2R5C 4.3292370932331545 0.7635526921153418 3 V 1 -1 10.713 0.0 0.0 1.2293 0.0 0.0 754.4185934711836 0.0 754.4185934711836 0.0 10.713337517843655 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2293 + + 12 + 1 1.374 38600.6 1.0 6463 5391 11852 HBL1_DMSO_200M_050219_1,11856 HBL1_DMSO_200M_050219_1,11856,VTSPVAVLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11857 61.124 64.0 690260.0 25 0 55973.0 + 15512 IPVEFQKTV 9 86 530.8062412901293 1059.5979296470584 2 530.8056518435478 MULTI CID FTMS 0 0 0 11852 1213109.375 0.6909492105563305 -1 0.1398735046386718 5 Unmodified _IPVEFQKTV_ ENSG00000085365|ENST00000621999|SCAMP1;nc|ENSG00000085365|O15126-2|SCAMP1 49.55428908609986 0.0413471690215031 3 {I|L}PVE{M(Oxidation (M))|F}QKTV 9 0 + 75.404 0.0 0.0 7.1162 7.1162 91.042 0.0 0.0 0.0 12.830466571458745 12.252684618815088 12.252684618815088 9.208187539523747 0 0.6989700043360187 1.2218487496163564 0.7302046884880937 0.0 + + {I|L}PVE{M(Oxidation (M))|F}QKTV;{I|L}PVE{M(Oxidation (M))|F}[AG]KTV;{I|L}[{I|L}T]EEQKTV;{I|L}[{I|L}T]TKVE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KA]KEEQKTV;[KA]KTKVE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}[{I|L}T]V[KT]E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KA]KEE[AG]KTV;[KA]KV[KT]E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7.1162;6.2472;2.2157;2.2;1.7654;1.7497;1.2827;0.8964;0.83239 +;-;-;-;-;-;-;-;- + 348 + 1 1.374 39919.2 1.0 6464 5391 11852 HBL1_DMSO_200M_050219_1,11857 HBL1_DMSO_200M_050219_1,11857,IPVEFQKTV True True IPVEFQKTV 61.124136 530.805651843548 23843492.0 11852.0 ENSG00000085365|ENST00000621999|SCAMP1;;nc|ENSG00000085365|O15126-2|SCAMP1 6.114162127176921 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11858 61.125 35.0 1404600.0 25 0 238730.0 + 4460 DAYALNHTL 9 87 509.25362910442976 1016.4927052756595 2 509.2537109255791 MULTI CID FTMS 0 0 0 11852 1124935.125 0.0034244330254782 24 -2.0107994079589844 6 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 51.629811660486645 0.0367964933207742 3 {[DA]|[EG]}YA{I|L}N[HT]{I|L} 9 0 + 65.63 0.0 0.0 6.4565 6.4565 89.644 0.0 0.0 0.0 38.713236101047045 15.831590422496134 15.831590422496134 9.208187539523756 0 1.1549471895720984 1.6989700043360187 1.7302046884880935 0.0 + + {[DA]|[EG]}YA{I|L}N[HT]{I|L};{[DA]|[EG]}YA{I|L}GG[HT]{I|L} 6.4565;5.5507 +;- + 223 + 1 1.374 44381.5 1.0 6465 5391 11852 HBL1_DMSO_200M_050219_1,11858 HBL1_DMSO_200M_050219_1,11858,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11859 61.127 63.0 787060.0 25 0 58543.0 + 10084 FPSEIVGKRI 10 65 573.3375937203099 1144.6606345074197 2 573.3382446169853 MULTI CID FTMS 0 0 0 11852 1085673.375 0.3650657059568586 -1 0.1398735046386718 7 Unmodified _FPSEIVGKRI_ ENSG00000171863|ENST00000645674|RPS7;ENST00000415804.2_1_4:4509290-4509386:+|nuORF;ENST00000426405.1_1_X:73629614-73629932:+|nuORF;ENST00000463499.1_1_4:42474097-42474295:+|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF 33.82136114134338 0.222812100547209 3 PKKV{I|L}ESPE 9 9 59.971 0.0 0.0 5.2392 0.0 0.0 119.074022361525 0.0 119.074022361525 0.0 34.4812969097282 0.0 0.0 0 1.5356668758921828 0.0 0.0 0.0 PKKV{I|L}ESPE 5.2392 - 198 1 1.374 45472.8 1.0 6466 5391 11852 HBL1_DMSO_200M_050219_1,11859 HBL1_DMSO_200M_050219_1,11859,FPSEIVGKRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11860 61.129 93.0 808020.0 25 0 92350.0 + 18766 LAMGPPRV 8 103 420.7435151090008 839.4724772848016 2 420.7436706423759 MULTI CID FTMS 0 0 0 11852 952899.25 0.5521660903463571 -1 0.1398735046386718 8 Unmodified _LAMGPPRV_ REV__ENST00000431601.5_1_3:39148536-39148707:-|nuORF 2.889219685676258 0.8067950007271085 3 {I|L} 1 -1 10.485 0.0 0.0 1.2489 0.0 0.0 708.3773825355813 0.0 708.3773825355813 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2489 + + 5 + 1 1.374 63719.2 1.0 6467 5391 11852 HBL1_DMSO_200M_050219_1,11860 HBL1_DMSO_200M_050219_1,11860,LAMGPPRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11861 61.131 93.0 853890.0 25 0 200960.0 + 27780 PLPPPPPLA 9 77 449.7730721368604 897.5315913405208 2 449.7734252810478 MULTI CID FTMS 0 0 0 11852 900588.5 0.4911053836261078 -1 0.1398735046386718 9 Unmodified _PLPPPPPLA_ ENSG00000176182|ENST00000322217|MYPOP 67.41302359171755 0.0220989861905124 3 [{I|L}P]PPPP 6 3 58.148 0.0 0.0 6.4787 0.0 0.0 0.0 296.1608278165416 296.1608278165416 43.69203016482871 0.0 0.0 0.0 0 1.274227503252014 2.0 0.0 0.0 + [{I|L}P]PPPP 6.4787 + + 155 1 1.374 68718.4 1.0 6468 5391 11852 HBL1_DMSO_200M_050219_1,11861 HBL1_DMSO_200M_050219_1,11861,PLPPPPPLA False False PLPPPPPLA 61.130942 449.773425281048 17202112.0 11852.0 ENSG00000176182|ENST00000322217|MYPOP 3.3414180676142373 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11862 61.133 71.0 660650.0 25 0 37868.0 + 17227 KLLGSMEQV 9 85 502.77497643862665 1003.5353999440532 2 502.7756530642509 MULTI CID FTMS 0 0 0 11852 770843.0 0.4409835535696765 -1 0.1398735046386718 10 Unmodified _KLLGSMEQV_ ENSG00000149262|ENST00000534064|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;ENST00000587624.5_1_7:64601607-64646883:+|nuORF;nc|ENSG00000149262|Q96HW7-2|INTS4;nc|ENSG00000149262|Q96HW7-3|INTS4 31.26834338654808 0.1333407332142048 3 G{I|L}{I|L}[SG]MEQV 9 1 52.273 0.0 0.0 5.2088 0.0 0.0 71.07431990791171 0.0 71.07431990791171 0.0 32.42873277379927 0.0 0.0 0 0.5796896906561032 0.0 0.7302046884880937 0.0 G{I|L}{I|L}[SG]MEQV 5.2088 - 128 1 1.374 41893.9 1.0 6469 5391 11852 HBL1_DMSO_200M_050219_1,11862 HBL1_DMSO_200M_050219_1,11862,KLLGSMEQV False True KLLGSMEQV 61.132604 502.775653064251 8071132.0 11852.0 nc|ENSG00000149262|Q96HW7-2|INTS4;;ENSG00000149262|ENST00000534064|INTS4;;nc|ENSG00000149262|Q96HW7-3|INTS4;;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;;ENST00000587624.5_1_7:64601607-64646883:+|nuORF 6.073067982991536 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11863 61.134 71.0 867830.0 25 0 124050.0 + 14047 IALDSHPTI 9 95 483.7667406799863 0 483.7666503787041 PEAK CID FTMS 0 0 0 11852 544285.0 0.4293201904465737 -1 0.1398735046386718 11 Unmodified _IALDSHPTI_ ENSG00000115738|ENST00000396290|ID2 20.453626601364224 0.1969592619112565 3 A{I|L}D 3 6 13.984 0.0 0.0 1.4484 0.0 0.0 113.08778936602889 550.2625826471311 663.35037201316 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + A{I|L}D 1.4484 + + 44 + 1 1.374 51578.4 1.0 6470 5391 11852 HBL1_DMSO_200M_050219_1,11863 HBL1_DMSO_200M_050219_1,11863,IALDSHPTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11864 61.136 87.0 543430.0 25 0 105390.0 + 29704 QPISTQTLV 9 81 493.7792900540562 985.5440271749123 2 493.7800475955009 MULTI CID FTMS 0 0 0 11852 538644.625 0.1159649281441927 -3 0.2389717102050781 12 Unmodified _QPISTQTLV_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4 37.97399986684836 0.0865783450051559 3 TQ{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V 6 6 21.15 0.0 0.0 2.146 0.0 0.0 248.17403654948453 0.0 248.17403654948453 0.0 10.66569691289537 0.0 0.0 0 0.3252574989159953 0.0 0.3807196863200844 0.4247425010840047 TQ{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V 2.146 - 285 + 1 1.374 44122.1 1.0 6471 5391 11852 HBL1_DMSO_200M_050219_1,11864 HBL1_DMSO_200M_050219_1,11864,QPISTQTLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11865 61.139 130.0 698830.0 25 0 98294.0 + 25027 MPRLIAKV 8 107 464.2938435464093 926.5731341596188 2 464.2943298220634 MULTI CID FTMS 0 0 0 11852 522932.90625 0.48222147848433 -1 0.1398735046386718 13 Unmodified _MPRLIAKV_ ENST00000559249.5_1_14:103802197-103802459:+|nuORF;ENSG00000100664|ENST00000216554|EIF5 34.10243960390752 0.3329570729325616 3 {[QV]|[N{I|L}]|[RA]|[KV]}[RN]{I|L}AKV 8 3 + 54.333 0.0 0.0 5.8638 5.8638 85.353 0.0 0.0 0.0 7.482101837575044 14.904630595263413 7.482101837575044 7.482101837575044 0 0.9634679910804403 1.6989700043360187 0.0 0.2302046884880938 {[QV]|[N{I|L}]|[RA]|[KV]}[RN]{I|L}AKV;[{I|L}V][DG]{I|L}{I|L}AKV;[{I|L}A]{[CP]|[EA]}{I|L}{I|L}AKV;V{I|L}{NN|[MP]|[D{I|L}]|[EV]}G{I|L}AKV;[{I|L}V]A[DV]{I|L}AKV;[{I|L}A]V[DV]{I|L}AKV;V{I|L}{NN|[MP]|[D{I|L}]|[EV]}G{I|L}AVK;V{I|L}{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]KV;V{I|L}{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]VK;[{I|L}V]{[QN]|[E{I|L}]|[KN]}[VG]AKV 5.8638;5.0563;4.8743;4.6639;4.6268;4.4448;4.0877;4.0797;3.5035;3.3575 -;-;-;-;-;-;-;-;-;- 411 1 1.374 75653.6 1.0 6472 5391 11852 HBL1_DMSO_200M_050219_1,11865 HBL1_DMSO_200M_050219_1,11865,MPRLIAKV False False MPRLIAKV 61.138858 464.294329822063 7781947.0 11852.0 ENST00000559249.5_1_14:103802197-103802459:+|nuORF;;ENSG00000100664|ENST00000216554|EIF5 0.7537630399068197 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11866 61.141 121.0 953780.0 25 0 130180.0 + 27985 PLYGKYCNY 9 111 560.7611320872129 1119.5077112412257 2 560.7615844607353 MULTI CID FTMS 0 0 0 11852 538954.5625 0.7076978062719097 -1 0.1398735046386718 14 Unmodified _PLYGKYCNY_ REV__ENSG00000187764|ENST00000422704|SEMA4D 8.593279151180031 0.6146971463335029 3 [R{M(Oxidation (M))|F}]KT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 7 -1 25.621 0.0 0.0 2.2886 0.0 0.0 0.0 236.9971881301507 236.9971881301507 10.48863081080408 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.2302046884880938 0.6307196863200843 [R{M(Oxidation (M))|F}]KT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 2.2886 - 358 1 1.374 92459.0 1.0 6473 5391 11852 HBL1_DMSO_200M_050219_1,11866 HBL1_DMSO_200M_050219_1,11866,PLYGKYCNY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11867 61.144 131.0 713250.0 25 0 66868.0 + 10548 FVEPSRQFV 9 89 554.7926051542189 1107.5706573752375 2 554.7931396365166 MULTI CID FTMS 0 0 0 11852 496870.21875 0.5274214350114342 1 -0.0487098693847656 15 Unmodified _FVEPSRQFV_ ENSG00000132432|ENST00000352861|SEC61G;ENST00000460484.5_1_7:54823470-54826890:-|nuORF 34.93206674587334 0.1032771302489716 3 {I|L}PEVE 5 8 37.664 0.0 0.0 3.4006 0.0 0.0 522.256639549025 0.0 522.256639549025 0.0 24.89959024659864 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 {I|L}PEVE 3.4006 - 152 1 1.374 81428.0 1.0 6474 5391 11852 HBL1_DMSO_200M_050219_1,11867 HBL1_DMSO_200M_050219_1,11867,FVEPSRQFV True True FVEPSRQFV 61.144067 554.793139636517 16322594.0 11852.0 ENST00000460484.5_1_7:54823470-54826890:-|nuORF;;ENSG00000132432|ENST00000352861|SEC61G 4.63416854540507 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11868 61.146 101.0 837130.0 25 0 42473.0 + 2393 AQPEMFDKV 9 113 532.7576867077277 1063.5008204822552 2 532.7576171755791 MULTI CID FTMS 0 0 0 11852 450173.59375 0.4274105620370317 -1 0.1398735046386718 16 Unmodified _AQPEMFDKV_ ENSG00000178694|ENST00000314622|NSUN3 43.77239144664712 0.0547478964384323 3 [QA]PEM{M(Oxidation (M))|F}DKV 9 0 + 50.03 0.0 0.0 4.7043 4.7043 85.363 0.0 0.0 0.0 12.757631757449431 10.959924024478129 10.959924024478129 13.746945037181185 0 0.5 0.7695510786217261 1.0044321917401078 0.0 + + [QA]PEM{M(Oxidation (M))|F}DKV;[EP]M{M(Oxidation (M))|F}DKV[QA];[QA]PEM{M(Oxidation (M))|F}[QT]{I|L};{[DA]|[EG]}[NG]{M(Oxidation (M))|F}DKV[QA];[QA]PE[HQ]QQV;[QA][YN][RD]V[QA];[EP]MN[Y{I|L}]V[QA];[QA]P[YQ]{NN|[MP]|[D{I|L}]|[EV]}MV;[QA]P{M(Oxidation (M))|F}WWMV;{[QD]|[EN]|[WG]|[KD]|[RS]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DKV[QA] 4.7043;3.4117;3.3468;2.4829;2.4303;2.028;1.9316;1.5331;1.5051;1.4035 +;-;-;-;-;-;-;-;-;- + 549 + 1 1.374 72016.4 1.0 6475 5391 11852 HBL1_DMSO_200M_050219_1,11868 HBL1_DMSO_200M_050219_1,11868,AQPEMFDKV True True AQPEMFDKV 61.146248 532.7579 6113038.0 11852.0 ENSG00000178694|ENST00000314622|NSUN3 7.689938386281331 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11869 61.149 128.0 820750.0 25 0 111260.0 + + 18792 RVLGENAIAV 10 122 521.3065743655121 0 521.3065673708916 PEAK CID FTMS 0 0 0 11852 464385.0 0.4859569637147085 -1 0.1398735046386718 17 Unmodified _LAPLMDVLAV_ nc|ENSG00000164190|Q6KC79-2|NIPBL;ENSG00000164190|ENST00000282516|NIPBL 26.88365393820708 0.2428278298207118 3 A{I|L}AN{I|L} 5 -1 26.058 0.0 0.0 2.5041 0.0 0.0 117.0829840808304 438.21592127017817 555.2989053510086 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 A{I|L}AN{I|L} 2.5041 - 132 + 1 1.374 88869.2 1.0 6476 5391 11852 HBL1_DMSO_200M_050219_1,11869 HBL1_DMSO_200M_050219_1,11869,LAPLMDVLAV False False RVLGENAIAV 61.148875 521.306567370892 4528080.0 11852.0 nc|ENSG00000164190|Q6KC79-2|NIPBL;;ENSG00000164190|ENST00000282516|NIPBL 4.341896851857503 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11870 61.155 313.0 824200.0 25 0 86816.0 + 10058 FPRHIEPEL 9 165 569.3065152697677 1136.598477606335 2 569.3073608279228 MULTI CID FTMS 0 0 0 11852 374230.4375 0.0571277457670974 -3 0.2389717102050781 18 Unmodified _FPRHIEPEL_ ENSG00000122674|ENST00000325974|CCZ1;ENSG00000146574|ENST00000316731|CCZ1B 88.36371040165146 0.0154903161960565 3 [EP]{I|L}[TP]{I|L}EPE{I|L} 10 4 + 92.229 0.0 0.0 8.1144 8.1144 86.703 0.0 0.0 0.0 3.076512587389644 10.044321917401078 3.076512587389644 3.076512587389644 0 1.5669015600442575 1.6989700043360187 1.416386562212267 0.0 [EP]{I|L}[TP]{I|L}EPE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RH{I|L}EPE{I|L};[EP]{I|L}[TP]{I|L}EP{I|L}E;{I|L}M{I|L}E[RH]PE{I|L};[EP]{I|L}[RH]{M(Oxidation (M))|F}PE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RH{I|L}EP{I|L}E;{[QN]|[E{I|L}]|[KN]}P[TP]{I|L}EPE{I|L};{I|L}M{I|L}[RH]EPE{I|L};{I|L}{M(Oxidation (M))|F}PE[RH]PE{I|L};[TP]{I|L}[EP]{I|L}EPE{I|L} 8.1144;7.8438;7.2307;7.099;6.9775;6.96;6.8526;6.7842;6.6952;6.5164 -;+;-;-;-;-;-;-;-;- + 3926 1 1.374 194475.9 1.0 6477 5391 11852 HBL1_DMSO_200M_050219_1,11870 HBL1_DMSO_200M_050219_1,11870,FPRHIEPEL True True FPRHIEPEL 61.154592 569.307360827923 319179032.0 11852.0 ENSG00000146574|ENST00000316731|CCZ1B;;ENSG00000122674|ENST00000325974|CCZ1 4.454035917917888 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11871 61.159 216.0 438490.0 25 0 64412.0 + 45711 YYEFREEAY 9 102 635.2749643998751 1268.53537586655 2 635.7767211794853 MULTI CID FTMS 0 0 0 11852 343039.75 0.7704521481199489 -1 0.1398735046386718 19 Unmodified _YYEFREEAY_ ENSG00000214753|ENST00000301785|HNRNPUL2 29.081581746732265 0.1611639662936252 3 YY[K{I|L}][C(Carbamidomethyl (C))S]EY[SG] 10 7 + 41.668 0.0 0.0 3.2847 3.2847 82.605 0.0 0.0 0.0 19.724440094127544 6.478174818886373 6.478174818886373 22.46961795817924 0 0.4247425010840047 2.0 0.3494850021680094 0.0 YY[K{I|L}][C(Carbamidomethyl (C))S]EY[SG];[{I|L}A]C(Carbamidomethyl (C))W{[{M(Oxidation (M))|F}H]|[RQ]}EY[SG];[NP]D[K{I|L}][C(Carbamidomethyl (C))S]EY[SG];[{I|L}A][WC(Carbamidomethyl (C))][KC]YYY;[{I|L}A][CS][C(Carbamidomethyl (C))R]AYYY;[DP]N[K{I|L}][C(Carbamidomethyl (C))S]EY[SG];[{I|L}A]WWEEEY[SG];[NP]Y[C(Carbamidomethyl (C))R]AYYY;[PG]GD[K{I|L}][C(Carbamidomethyl (C))S]EY[SG];[YQ][HK]EEEY[SG] 3.2847;1.5134;1.2772;1.2563;1.1982;1.1841;1.1193;0.85273;0.6701;0.62102 -;-;-;-;-;-;-;-;-;- 445 1 1.374 77016.2 1.0 6478 5391 11852 HBL1_DMSO_200M_050219_1,11871 HBL1_DMSO_200M_050219_1,11871,YYEFREEAY False True YYEFREEAY 61.158694 635.2757 2319047.75 11852.0 ENSG00000214753|ENST00000301785|HNRNPUL2 6.399996280670166 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11872 61.163 208.0 448190.0 25 0 26393.0 + 6093 DSRKLPMI 8 116 480.27048018395885 958.5264074347176 2 480.2701599001884 MULTI CID FTMS 0 0 0 11852 359923.9375 0.4797806772319036 -1 0.1398735046386718 20 Unmodified _DSRKLPMI_ ENSG00000008282|ENST00000455385|SYPL1;nc|ENSG00000008282|Q16563|SYPL1 27.22323531849824 0.4714994429809818 3 DPM{I|L} 4 4 42.933 0.0 0.0 4.4791 0.0 0.0 484.3137379376969 0.0 484.3137379376969 0.0 31.513067000015216 0.0 0.0 0 1.25 0.0 0.5 0.0 DPM{I|L} 4.4791 - 290 1 1.374 75301.7 1.0 6479 5391 11852 HBL1_DMSO_200M_050219_1,11872 HBL1_DMSO_200M_050219_1,11872,DSRKLPMI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11874 61.167 11.0 3003700.0 25 0 558870.0 + 40567 VKGKSGSG 8 77 360.20684867659014 718.3991444199803 2 360.2064697146416 MULTI CID FTMS 0 0 0 11873 7612606.5 1.0 0 0.0 1 Unmodified _VKGKSGSG_ REV__ENST00000473395.1_1_2:198365100-198366019:+|nuORF 0.0 0.8243325171867699 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.374 34414.6 1.0 6480 5392 11873 HBL1_DMSO_200M_050219_1,11874 HBL1_DMSO_200M_050219_1,11874,VKGKSGSG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11875 61.168 14.0 2857200.0 25 0 216040.0 + 41501 VPMTPLRTV 9 68 507.2945474146185 0 507.2946349978447 PEAK CID FTMS 0 0 0 11873 3429567.25 0.3557705115131698 5 -0.3945770263671875 2 Unmodified _VPMTPLRTV_ ENSG00000107949|ENST00000278100|BCCIP 22.774965066869 0.1759154374903103 3 PMTP 4 5 30.477 0.0 0.0 3.0099 0.0 0.0 99.06903394763532 484.2855623834594 583.3545963310947 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.805462187404089 0.0 + PMTP 3.0099 + + 21 + 1 1.374 40736.0 1.0 6481 5392 11873 HBL1_DMSO_200M_050219_1,11875 HBL1_DMSO_200M_050219_1,11875,VPMTPLRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11876 61.169 29.0 500430.0 25 0 51313.0 + 35151 SRHAAKAA 8 45 406.2314702035046 810.4483874738092 2 406.2314941287041 MULTI CID FTMS 0 0 0 11873 4889561.0 1.0 0 0.0 3 Unmodified _SRHAAKAA_ REV__ENST00000274031.7_1_4:140477471-140477915:-|nuORF 0.6014990680409731 0.820681427635312 3 V 1 -1 10.969 0.0 0.0 1.3535 0.0 0.0 693.3690397949015 0.0 693.3690397949015 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3535 - 2 + 1 1.374 17146.2 1.0 6482 5392 11873 HBL1_DMSO_200M_050219_1,11876 HBL1_DMSO_200M_050219_1,11876,SRHAAKAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11877 61.17 20.0 838850.0 25 0 80239.0 + 27840 PLQPSPEEV 9 44 498.2554118595055 994.496270785811 2 498.2559387087822 MULTI CID FTMS 0 0 0 11873 3173209.75 1.0 0 0.0 4 Unmodified _PLQPSPEEV_ REV__ENSG00000034152|ENST00000342679|MAP2K3;REV__ENSG00000108984|ENST00000590474|MAP2K6;REV__ENST00000477540.1_1_17:21215348-21217539:+|nuORF;REV__nc|ENSG00000034152|P46734-2|MAP2K3;REV__nc|ENSG00000034152|P46734-3|MAP2K3;REV__nc|ENSG00000108984|P52564-2|MAP2K6 1.844237919475145 0.850302753031785 3 V 1 -1 13.495 0.0 0.0 1.357 0.0 0.0 877.4168239247743 0.0 877.4168239247743 0.0 0.7306401783911909 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.357 + + 2 + 1 1.374 18964.0 1.0 6483 5392 11873 HBL1_DMSO_200M_050219_1,11877 HBL1_DMSO_200M_050219_1,11877,PLQPSPEEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11878 61.172 33.0 1342800.0 25 0 172960.0 37745 TLRDGGRYSL 10 69 379.8731103052179 1136.5975015158538 3 379.8732482790947 MULTI CID FTMS 0 0 0 11873 1471105.875 0.1986622894336351 -2 0.1885833740234375 5 Unmodified _TLRDGGRYSL_ ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN 10.073929032068715 0.6785112666868882 3 [{I|L}T][VS]H{I|L}EPP 9 8 43.592 0.0 0.0 3.8353 0.0 0.0 0.0 160.06622645165376 160.06622645165376 28.10788741577753 0.0 0.0 0.0 0 0.0 2.0 0.25 0.0 [{I|L}T][VS]H{I|L}EPP 3.8353 - 147 1 1.374 45576.4 1.0 6484 5392 11873 HBL1_DMSO_200M_050219_1,11878 HBL1_DMSO_200M_050219_1,11878,TLRDGGRYSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11879 61.173 70.0 727240.0 25 0 72655.0 30891 RIPLAKMV 8 76 309.8652442687628 926.5739034064884 3 309.8649169802666 MULTI CID FTMS 0 0 0 11873 1174004.625 1.0 0 0.0 6 Unmodified _RIPLAKMV_ ENST00000355072.9_1_4:3244305-3244500:+|nuORF 8.593279151180031 0.7721714526254883 3 MV 2 6 20.969 0.0 0.0 2.2631 0.0 0.0 0.0 693.4433737754789 693.4433737754789 6.276362525516532 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + MV 2.2631 + + 33 + 1 1.374 50034.9 1.0 6485 5392 11873 HBL1_DMSO_200M_050219_1,11879 HBL1_DMSO_200M_050219_1,11879,RIPLAKMV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11880 61.175 82.0 241390.0 25 0 15760.0 + 20972 LNLTEKSV 8 57 452.26064843410126 902.5067439350024 2 452.2607910037041 MULTI CID FTMS 0 0 0 11873 770653.0625 1.0 0 0.0 7 Unmodified _LNLTEKSV_ REV__ENSG00000163539|ENST00000682230|CLASP2;REV__nc|ENSG00000163539|O75122-3|CLASP2;REV__nc|ENSG00000163539|O75122|CLASP2 5.230669730166228 0.792582437072536 3 V 1 -1 12.474 0.0 0.0 1.3822 0.0 0.0 785.4272436682041 0.0 785.4272436682041 0.0 1.7609125905568137 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3822 + + 13 + 1 1.374 25225.9 1.0 6486 5392 11873 HBL1_DMSO_200M_050219_1,11880 HBL1_DMSO_200M_050219_1,11880,LNLTEKSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11881 61.182 362.0 385270.0 25 0 22339.0 -1 0 201 329.71038914377044 657.4062253543409 2 329.7101623415947 MULTI CID FTMS 0 0 0 11873 814267.75 1.0 0 0.0 8 3 S 1 -1 10.607 0.0 0.0 1.6135 0.0 0.0 552.3642159322691 0.0 552.3642159322691 0.0 -0.4055787291241213 -0.4055787291241213 0.0 0 0.0 0.0 0.0228787452803375 0.0 S 1.6135 - 47 + 1 1.374 110709.0 1.0 6487 5392 11873 HBL1_DMSO_200M_050219_1,11881 HBL1_DMSO_200M_050219_1,11881, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11882 61.183 54.0 505690.0 25 0 37262.0 -1 EIFDMKKW 8 60 556.7770451298529 1111.5395373265058 2 556.7772704958916 MULTI CID FTMS 0 0 0 11873 807796.125 1.0 0 0.0 9 Oxidation (M) _EIFDM(Oxidation (M))KKW_ ENSG00000171234|ENST00000305231|UGT2B7 2.302733041254933 0.8103549651115762 3 {I|L} 1 -1 10.596 0.0 0.0 0.95327 0.0 0.0 980.4443662833402 0.0 980.4443662833402 0.0 3.606231995235856 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.95327 + + 13 + 1 1.374 33528.3 1.0 6488 5392 11873 HBL1_DMSO_200M_050219_1,11882 HBL1_DMSO_200M_050219_1,11882,EIFDMKKW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11883 61.185 78.0 667130.0 25 0 102300.0 + 45041 YPYEHSYGL 9 89 564.7535189901482 1127.4924850470964 2 564.7531005740166 MULTI CID FTMS 0 0 0 11873 741051.0 1.0 0 0.0 10 Unmodified _YPYEHSYGL_ ENSG00000119787|ENST00000378954|ATL2;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2 36.04419817259434 0.0971720506436186 3 YP 2 7 42.206 0.0 0.0 3.7434 0.0 0.0 0.0 864.3545626275999 864.3545626275999 6.763458306133572 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + YP 3.7434 + + 240 + 1 1.374 47806.5 1.0 6489 5392 11873 HBL1_DMSO_200M_050219_1,11883 HBL1_DMSO_200M_050219_1,11883,YPYEHSYGL True True YPYEHSYGL 61.184754 564.753100574017 19924296.0 11873.0 nc|ENSG00000119787|Q8NHH9-2|ATL2;;ENSG00000119787|ENST00000378954|ATL2;;nc|ENSG00000119787|Q8NHH9-5|ATL2;;nc|ENSG00000119787|Q8NHH9-3|ATL2;;nc|ENSG00000119787|Q8NHH9-4|ATL2 7.0592929522196455 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11884 61.191 347.0 368720.0 25 0 36788.0 + 18502 KYPDYYQQI 9 146 609.2945278494476 1216.5745027656951 2 609.2942382693291 MULTI CID FTMS 0 0 0 11873 644001.4375 0.4010222229798453 -3 0.2720870971679687 11 Unmodified _KYPDYYQQI_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 32.78568957990786 0.1150597335874693 3 [{I|L}T][DC]{M(Oxidation (M))|F}GV{M(Oxidation (M))|F}KST 11 10 + 41.902 0.0 0.0 3.4443 3.4443 74.577 0.0 0.0 0.0 17.753863481026325 10.147885270599245 10.147885270599245 4.254162963117096 0 0.4247425010840047 2.0 0.5629529932484498 0.0 [{I|L}T][DC]{M(Oxidation (M))|F}GV{M(Oxidation (M))|F}KST;[{I|L}T]A[HQ]K[C(Carbamidomethyl (C))C]RT;[{I|L}T][YG][MT]YQQ{I|L};[{I|L}T]A[WH][QP]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]A[YC(Carbamidomethyl (C))][W{M(Oxidation (M))|F}]RT;[{I|L}T]A[YC(Carbamidomethyl (C))]HHKST;[{I|L}T][QT]{[QV]|[N{I|L}]|[RA]|[KV]}YA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[DP]YYKYQQ{I|L};[{I|L}T]A{[SA]|[TG]}{[QV]|[N{I|L}]|[RA]|[KV]}YA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]{[ES]|[DT]|[{I|L}C]}KS{[MG]|[TS]}A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3.4443;3.0946;3.0531;2.8379;2.7606;2.693;2.3748;2.3601;2.3466;2.3177 -;-;-;-;-;-;-;-;-;- 2465 + 1 1.374 98892.9 1.0 6490 5392 11873 HBL1_DMSO_200M_050219_1,11884 HBL1_DMSO_200M_050219_1,11884,KYPDYYQQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11885 61.193 75.0 601050.0 25 0 109510.0 + 29925 QSISGENGDGL 11 75 538.7448360622803 1075.4751191913606 2 538.7441284060478 MULTI CID FTMS 0 0 0 11873 563640.5 1.0 0 0.0 12 Unmodified _QSISGENGDGL_ REV__ENSG00000173838|ENST00000311269|MARCHF10 17.11289562659939 0.6791789249425932 3 Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GQ[HN] 8 -1 14.694 0.0 0.0 1.3663 0.0 0.0 146.03721816230626 0.0 146.03721816230626 0.0 1.0490926346089484 0.0 0.0 0 0.0 0.0 0.7887254899964358 0.5994850021680094 Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GQ[HN] 1.3663 - 135 1 1.374 39149.9 1.0 6491 5392 11873 HBL1_DMSO_200M_050219_1,11885 HBL1_DMSO_200M_050219_1,11885,QSISGENGDGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11886 61.196 158.0 492920.0 25 0 37865.0 + -1 ANTLMGGR 8 98 418.2093710129257 834.4041890926514 2 418.2099792361259 MULTI CID FTMS 0 0 0 11873 471381.28125 1.0 0 0.0 13 Oxidation (M) _ANTLM(Oxidation (M))GGR_ REV__ENSG00000122140|ENST00000241600|MRPS2 23.1484247019978 0.5573009939494978 3 {[QG]|[NA]}T{I|L} 4 -1 25.476 0.0 0.0 3.0532 0.0 0.0 0.0 432.1700331690765 432.1700331690765 8.455061145906374 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 1.2302046884880935 {[QG]|[NA]}T{I|L} 3.0532 + + 123 1 1.374 68453.6 1.0 6492 5392 11873 HBL1_DMSO_200M_050219_1,11886 HBL1_DMSO_200M_050219_1,11886,ANTLMGGR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11887 61.198 89.0 506900.0 25 0 31899.0 + 37700 TLPERPLTEV 10 88 577.8242074634283 1153.6338619936564 2 577.8251220583916 MULTI CID FTMS 0 0 0 11873 448111.4375 0.6647266013558423 5 -0.3945770263671875 14 Unmodified _TLPERPLTEV_ ENSG00000204569|ENST00000376511|PPP1R10 21.53697664764585 0.484802182336468 3 {NN|[MP]|[D{I|L}]|[EV]}G[{I|L}V]{I|L}{I|L}KQ 9 8 29.152 0.0 0.0 2.527 0.0 0.0 0.0 170.9893741410863 170.9893741410863 16.93365630477992 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}G[{I|L}V]{I|L}{I|L}KQ 2.527 - 70 1 1.374 41375.3 1.0 6493 5392 11873 HBL1_DMSO_200M_050219_1,11887 HBL1_DMSO_200M_050219_1,11887,TLPERPLTEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11888 61.206 435.0 170500.0 25 0 15212.0 + 18193 KVAEKLEALSV 11 129 593.8569683982237 0 593.8571655154228 PEAK CID FTMS 0 0 0 11873 452162.21875 1.0 0 0.0 15 Unmodified _KVAEKLEALSV_ ENSG00000099901|ENST00000430524|RANBP1;ENST00000435265.5_1_22:20114425-20114572:+|nuORF;ENST00000448394.2_1_22:20110177-20114572:+|nuORF;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1 14.824719086485125 0.4057069173400961 3 V 1 10 10.986 0.0 0.0 0.92656 0.0 0.0 128.09276872828474 955.5119899503676 1083.6047586786522 0.0 0.0 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.0 + V 0.92656 + + 166 + 1 1.374 58560.7 1.0 6494 5392 11873 HBL1_DMSO_200M_050219_1,11888 HBL1_DMSO_200M_050219_1,11888,KVAEKLEALSV False True KVAEKLEALSV 61.205625 593.857165515423 1073123.5 11873.0 ENST00000448394.2_1_22:20110177-20114572:+|nuORF;;nc|ENSG00000099901|P43487-2|RANBP1;;ENSG00000099901|ENST00000430524|RANBP1;;nc|ENSG00000099901|P43487|RANBP1;;ENST00000435265.5_1_22:20114425-20114572:+|nuORF 4.231367111206055 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11889 61.208 92.0 247360.0 25 0 16661.0 + -1 LMRQMEENISL 11 62 465.8929772495672 1394.6571023489014 3 465.8929626345634 MULTI CID FTMS 0 0 0 11873 401128.40625 1.0 0 0.0 16 2 Oxidation (M) _LM(Oxidation (M))RQM(Oxidation (M))EENISL_ REV__ENSG00000010295|ENST00000619571|IFFO1;REV__ENST00000471408.5_1_12:6649651-6659338:-|nuORF;REV__ENST00000488007.5_1_12:6649651-6660148:-|nuORF;REV__nc|ENSG00000010295|Q0D2I5-2|IFFO1;REV__nc|ENSG00000010295|Q0D2I5-4|IFFO1;REV__nc|ENSG00000010295|Q0D2I5-5|IFFO1;REV__nc|ENSG00000010295|Q0D2I5-6|IFFO1;REV__nc|ENSG00000010295|Q0D2I5-7|IFFO1;REV__nc|ENSG00000010295|Q0D2I5|IFFO1 2.843284757254958 0.8617331327080043 3 TV 2 -1 16.454 0.0 0.0 1.1798 0.0 0.0 1176.529994660228 0.0 1176.529994660228 0.0 3.6227313277985473 0.0 0.0 0 0.0 0.0 0.0 0.0 TV 1.1798 - 21 + 1 1.374 25981.9 1.0 6495 5392 11873 HBL1_DMSO_200M_050219_1,11889 HBL1_DMSO_200M_050219_1,11889,LMRQMEENISL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11890 61.211 145.0 609640.0 25 0 116690.0 + -1 NCPMKWVS 8 92 341.1581404177111 0 341.1580688357353 PEAK CID FTMS 0 0 0 11873 399163.84375 1.0 0 0.0 17 Carbamidomethyl (C) _NC(Carbamidomethyl (C))PMKWVS_ REV__ENST00000367634.6_1_1:178888341-178888569:+|nuORF 0.4583401331227399 0.5992596052108689 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.374 77376.0 1.0 6496 5392 11873 HBL1_DMSO_200M_050219_1,11890 HBL1_DMSO_200M_050219_1,11890,NCPMKWVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11891 61.217 333.0 241020.0 25 0 45720.0 + 41493 VPMGKALG 8 136 386.7213303999605 771.4281078667209 2 387.2461730837822 MULTI CID FTMS 0 0 0 11873 61464.40625 0.9220091328481936 -5 0.3471412658691406 18 Unmodified _VPMGKALG_ REV__ENSG00000203995|ENST00000371528|ZYG11A;REV__nc|ENSG00000203995|Q6WRX3-2|ZYG11A 2.577480529830294 0.808687252328423 3 {I|L} 1 -1 9.6041 0.0 0.0 1.245 0.0 0.0 640.3330436350788 0.0 640.3330436350788 0.0 3.942256035117281 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.245 + + 17 + 1 1.374 64922.0 1.0 6497 5392 11873 HBL1_DMSO_200M_050219_1,11891 HBL1_DMSO_200M_050219_1,11891,VPMGKALG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11892 61.221 177.0 308650.0 25 0 44125.0 + 41046 VMIQHVENL 9 91 541.7871089343852 1081.5596649355705 2 541.7870971560478 MULTI CID FTMS 0 0 0 11873 316955.03125 1.0 0 0.0 19 Unmodified _VMIQHVENL_ chr12:25052956-25063720|41|17.37|0.82|4.41|+|ENST00000547044|IRAG2,IRAG2;ENSG00000118308|ENST00000556887|IRAG2;nc|ENSG00000118308|Q12912|IRAG2 53.832793166522166 0.0319663582346103 3 [HV]AAVM[SG]V{I|L} 10 8 25.418 0.0 0.0 2.3502 0.0 0.0 0.0 114.000496804964 114.000496804964 9.546736568507582 0.0 0.0 0.0 0 0.4247425010840047 1.0 0.0 0.0 [HV]AAVM[SG]V{I|L} 2.3502 - 572 1 1.374 52530.7 1.0 6498 5392 11873 HBL1_DMSO_200M_050219_1,11892 HBL1_DMSO_200M_050219_1,11892,VMIQHVENL True True VMIQHVENL 61.221183 541.787097156048 2592182.5 11873.0 nc|ENSG00000118308|Q12912|IRAG2;;ENSG00000118308|ENST00000556887|IRAG2;;chr12:25052956-25063720|41|17.37|0.82|4.41|+|ENST00000547044|IRAG2,IRAG2 3.992186387379964 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11893 61.231 537.0 68585.0 25 0 16289.0 + 41074 VMVGERFLVEY 11 66 671.3465453982353 0 671.3465453982353 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _VMVGERFLVEY_ REV__nc|ENSG00000178209|Q15149|PLEC 2.735195868890462 0.4761840153648598 3 E 1 -1 4.6041 0.0 0.0 0.34342 0.0 0.0 944.4778675525268 264.1362398736938 1208.6141074262207 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.34342 + + 2 + 1 1.374 36969.5 1.0 6499 5392 11873 HBL1_DMSO_200M_050219_1,11893 HBL1_DMSO_200M_050219_1,11893,VMVGERFLVEY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11895 61.241 478.0 272370.0 25 0 12395.0 -1 0 204 333.6986946813787 0 333.6987487673759 PEAK CID FTMS 0 0 0 11894 89255.03125 0.1575544188544497 1 -0.1029472351074218 1 3 G 1 -1 3.0989 0.0 0.0 0.46574 0.0 0.0 333.2077832894768 272.1296480768188 605.3374313662956 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.46574 - 19 + 1 1.374 107824.9 1.0 6500 5393 11894 HBL1_DMSO_200M_050219_1,11895 HBL1_DMSO_200M_050219_1,11895, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11896 61.25 516.0 500710.0 25 0 52926.0 + 22060 LPPPPPPQL 9 200 478.28392878063295 954.553304628066 2 478.2838622927666 MULTI CID FTMS 0 0 0 11894 425739.5625 0.7333776399604578 1 -0.1029472351074218 2 Unmodified _LPPPPPPQL_ ENSG00000184083|ENST00000375180|FAM120C;nc|ENSG00000184083|Q9NX05-2|FAM120C 101.72198241140316 0.010086100337927 3 [{I|L}P]PPPPPQ{I|L} 9 0 + 72.198 0.0 0.0 7.5636 7.5636 88.757 0.0 0.0 0.0 5.878542917281692 17.75219148539975 5.878542917281692 5.878542917281692 0 2.579689690656103 2.0 0.0 1.0774509799928715 + + [{I|L}P]PPPPPQ{I|L};[{I|L}P]PPPPP[Q{I|L}];[{I|L}P]PPPPQP{I|L};[{I|L}P]PPPPQ{I|L}P;[{I|L}P]PPPPP[AG]{I|L};[{I|L}P][YK]PPQ{I|L};[{I|L}P]P[YK]PQ{I|L};[{I|L}P]PPPP[AG]P{I|L};[{I|L}P]PPPPPAAV;[{I|L}P]PP[YK]Q{I|L} 7.5636;6.9477;6.819;5.7038;5.4702;5.1414;5.0953;5.028;4.9134;4.8739 +;+;-;-;-;-;-;-;-;- + 1051 + 1 1.374 195416.3 1.0 6501 5393 11894 HBL1_DMSO_200M_050219_1,11896 HBL1_DMSO_200M_050219_1,11896,LPPPPPPQL False False LPPPPPPQL 61.250327 478.283862292767 7241939.5 11894.0 ENSG00000184083|ENST00000375180|FAM120C;;nc|ENSG00000184083|Q9NX05-2|FAM120C 5.138898213704427 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11897 61.254 194.0 597610.0 25 0 51412.0 -1 EMKITSAYL 9 127 536.2744752935283 1070.5343976538566 2 536.2729980349541 MULTI CID FTMS 0 0 0 11894 437078.15625 0.5399440433249232 -3 0.256805419921875 3 Oxidation (M) _EM(Oxidation (M))KITSAYL_ ENSG00000130414|ENST00000252711|NDUFA10;nc|ENSG00000130414|O95299-2|NDUFA10 21.74664581756881 0.2544899275067181 3 {I|L}YADYKW{I|L} 8 -1 + 59.564 0.0 0.0 5.5639 5.5639 84.69 0.0 0.0 0.0 31.842378559560984 9.98564426840403 9.98564426840403 7.95880017344075 0 0.25 1.3010299956639813 0.0 0.0 {I|L}YADYKW{I|L};{I|L}YAD[WK]Y{I|L};{I|L}YADY{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{I|L}YA[NS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L};{I|L}YA{[MG]|[TS]}{[MS]|[{M(Oxidation (M))|F}A]}W{I|L};{I|L}YWY{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{I|L}YADY{[QV]|[N{I|L}]|[RA]|[KV]}TV;{I|L}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[MS]|[{M(Oxidation (M))|F}A]}W{I|L};{I|L}YA[NS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F};{I|L}YA[NS]{NN|[MP]|[D{I|L}]|[EV]}Y{I|L} 5.5639;4.8205;4.413;4.072;3.9767;3.8079;3.6861;3.3716;3.2826;3.2284 -;-;-;-;-;-;-;-;-;- 367 + 1 1.374 90686.9 1.0 6502 5393 11894 HBL1_DMSO_200M_050219_1,11897 HBL1_DMSO_200M_050219_1,11897,EMKITSAYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11898 61.263 515.0 560640.0 25 0 31352.0 + 18117 KTLERSYLL 9 198 561.8297077409638 1121.6448625487276 2 561.8298828005791 MULTI CID FTMS 0 0 0 11894 374957.53125 0.3404479792748113 -4 0.3403091430664062 4 Unmodified _KTLERSYLL_ ENSG00000167325|ENST00000300738|RRM1 51.41523569358685 0.0372669606867193 3 KT{I|L}[YV]G{[ES]|[DT]|[{I|L}C]}{I|L}{I|L} 10 4 + 43.23 0.0 0.0 3.8541 3.8541 69.688 0.0 0.0 0.0 1.017966002862842 1.017966002862842 1.017966002862842 0.5115252244738144 0 1.4916440611282624 0.0 0.6989700043360187 0.0 KT{I|L}[YV]G{[ES]|[DT]|[{I|L}C]}{I|L}{I|L};KT{I|L}[YR]{[ES]|[DT]|[{I|L}C]}{I|L}{I|L};KT{I|L}[YV]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L};[R{M(Oxidation (M))|F}]KGC(Carbamidomethyl (C))TK{I|L}{I|L};KT{I|L}[YQ]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L};K{I|L}[YR]T{[ES]|[DT]|[{I|L}C]}{I|L}{I|L};KT{I|L}[YQ]GAKT{I|L};[R{M(Oxidation (M))|F}]K[WP]Y{I|L}{I|L};K{I|L}T[YV]G{[ES]|[DT]|[{I|L}C]}{I|L}{I|L};K{I|L}T[YV]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L} 3.8541;3.8085;3.8085;3.7634;3.4946;3.3411;3.3106;3.194;3.1399;3.0943 -;-;-;-;-;-;-;-;-;- 4766 + 1 1.374 214799.0 1.0 6503 5393 11894 HBL1_DMSO_200M_050219_1,11898 HBL1_DMSO_200M_050219_1,11898,KTLERSYLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11899 61.273 587.0 492060.0 25 0 102360.0 + 22252 LPRLIIRKV 9 195 554.3895699099648 1106.7645868867296 2 554.3901855349541 MULTI CID FTMS 0 0 0 11894 282477.8125 0.5760538790334586 1 -0.1029472351074218 5 Unmodified _LPRLIIRKV_ ENSG00000168214|ENST00000355476|RBPJ;ENST00000411556.2_1_9:44472681-44473188:+|nuORF;ENST00000514380.5_1_4:26322378-26431729:+|nuORF;nc|ENSG00000168214|Q06330-2|RBPJ;nc|ENSG00000168214|Q06330-3|RBPJ;nc|ENSG00000168214|Q06330-4|RBPJ;nc|ENSG00000168214|Q06330-5|RBPJ;nc|ENSG00000168214|Q06330-6|RBPJ;nc|ENSG00000168214|Q06330|RBPJ 53.832793166522166 0.0319663582346103 3 {I|L}PR{I|L}{I|L}{I|L}RKV 9 0 + 45.624 0.0 0.0 4.1223 4.1223 84.41 0.0 0.0 0.0 22.83832857168054 4.494755188766121 4.494755188766121 19.73421213931376 0 1.753567058712731 0.744727494896694 0.0 0.9163865622122672 + + {I|L}PR{I|L}{I|L}{I|L}RKV;[{I|L}P]R{I|L}{I|L}{I|L}RKV 4.1223;2.3392 +;+ + 888 + 1 1.374 221517.1 1.0 6504 5393 11894 HBL1_DMSO_200M_050219_1,11899 HBL1_DMSO_200M_050219_1,11899,LPRLIIRKV True True LPRLIIRKV 61.273416 554.390185534954 3382994.75 11894.0 ENST00000411556.2_1_9:44472681-44473188:+|nuORF;;nc|ENSG00000168214|Q06330-2|RBPJ;;nc|ENSG00000168214|Q06330-3|RBPJ;;ENST00000514380.5_1_4:26322378-26431729:+|nuORF;;nc|ENSG00000168214|Q06330-6|RBPJ;;ENSG00000168214|ENST00000355476|RBPJ;;nc|ENSG00000168214|Q06330-4|RBPJ;;nc|ENSG00000168214|Q06330-5|RBPJ;;nc|ENSG00000168214|Q06330|RBPJ 4.581676244735718 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11900 61.284 610.0 379540.0 25 0 23073.0 + -1 DALATKGRLIV 11 201 578.3730425957543 577.3657661291543 1 578.3732787966728 MULTI CID FTMS 0 0 0 11894 281925.4375 0.532740054483298 -4 0.3403091430664062 6 nc|ENSG00000180011|Q8N4Q0-2|PTGR3;ENSG00000180011|ENST00000322342|PTGR3 3 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F} 4 -1 15.239 0.0 0.0 2.6394 0.0 0.0 0.0 128.15858774464178 128.15858774464178 2.986271726157847 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F} 2.6394 - 152 1 1.374 169447.1 1.0 6505 5393 11894 HBL1_DMSO_200M_050219_1,11900 HBL1_DMSO_200M_050219_1,11900, False False DALATKGRLIV 61.284081 578.373278796673 1807970.625 11894.0 nc|ENSG00000180011|Q8N4Q0-2|PTGR3;;ENSG00000180011|ENST00000322342|PTGR3 0.7205877155065536 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11901 61.291 362.0 626040.0 25 0 51206.0 + + -1 RMAQRFYNL 9 206 400.5421969657282 1198.6047614973843 3 400.5416747927666 MULTI CID FTMS 0 0 0 11894 202538.609375 0.87655714766415 -1 0.0682220458984375 7 Carbamidomethyl (C) _TLLC(Carbamidomethyl (C))RPDPDL_ ENSG00000112578|ENST00000230340|BYSL 34.221707139014875 0.2185845369562963 3 [{I|L}T]{I|L}EK 5 -1 45.317 0.0 0.0 3.7808 0.0 0.0 0.0 611.2345310792883 611.2345310792883 21.76004007452519 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.0 [{I|L}T]{I|L}EK 3.7808 - 1375 + 1 1.374 175720.5 1.0 6506 5393 11894 HBL1_DMSO_200M_050219_1,11901 HBL1_DMSO_200M_050219_1,11901,TLLCRPDPDL False False RMAQRFYNL 61.290591 400.541674792767 1645393.25 11894.0 ENSG00000112578|ENST00000230340|BYSL 0.472861980398496 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11902 61.304 800.0 178410.0 25 0 16458.0 + 23596 LTPIFMSYNL 10 156 599.811275939154 1197.607998945108 2 599.8127319216728 MULTI CID FTMS 0 0 0 11894 126407.328125 1.0 0 0.0 8 Unmodified _LTPIFMSYNL_ REV__nc|ENSG00000161533|Q15067|ACOX1 13.90604991867851 0.6142120002215601 3 [VG]G{I|L}EK 6 -1 35.812 0.0 0.0 2.9903 0.0 0.0 0.0 611.2339571588499 611.2339571588499 12.313645144106276 0.0 0.0 0.0 0 0.0941876774005248 1.6989700043360187 0.0 0.0 [VG]G{I|L}EK 2.9903 - 949 + 1 1.374 103579.8 1.0 6507 5393 11894 HBL1_DMSO_200M_050219_1,11902 HBL1_DMSO_200M_050219_1,11902,LTPIFMSYNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11903 61.32 800.0 96833.0 25 0 4626.8 + 43719 YDAREIVNNV 10 131 596.8013712563409 1191.5881895794817 2 596.8013183474541 MULTI CID FTMS 0 0 0 11894 113240.21875 0.6229509521279979 -2 0.1169319152832031 9 Unmodified _YDAREIVNNV_ ENSG00000077097|ENST00000264331|TOP2B;nc|ENSG00000077097|Q02880-2|TOP2B 38.61474834105838 0.1721950110283317 3 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}VNDYNV 10 6 + 58.969 0.0 0.0 4.9487 4.9487 83.659 0.0 0.0 0.0 8.526136655227958 45.02398898038082 8.526136655227958 9.164539485499262 0 0.7887254899964358 0.0 0.0 0.6747425010840047 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}VNDYNV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}VGGDYNV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}VNDYGGV;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}VNDYNV;[DV][RV]VNDYNV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[YD]|[{M(Oxidation (M))|F}M]}VNNV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}V{[YD]|[{M(Oxidation (M))|F}M]}NNV;[{I|L}T]{[VA]|[{I|L}G]}[PS]NDYNV;{[NV]|[RG]}[KQ]VNDYNV;[KG][NG]{I|L}VNDYNV 4.9487;4.1796;4.1796;4.0324;4.0079;3.8294;3.8294;3.7475;3.7123;3.4464 -;-;-;-;-;-;-;-;-;- 914 1 1.374 61105.5 0.7699999809265137 6508 5393 11894 HBL1_DMSO_200M_050219_1,11903 HBL1_DMSO_200M_050219_1,11903,YDAREIVNNV False True YDAREIVNNV 61.31972 596.801318347454 1609591.875 11894.0 nc|ENSG00000077097|Q02880-2|TOP2B;;ENSG00000077097|ENST00000264331|TOP2B 5.784375826517741 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11904 61.334 800.0 40544.0 25 0 1487.8 -1 0 63 807.0543165366189 2418.1411202100567 3 807.3914672732353 MULTI CID FTMS 0 0 0 11894 85957.875 0.9683383529775816 -1 0.0682220458984375 10 3 S{[QG]|[NA]} 3 -1 12.205 0.0 0.0 0.50473 0.0 0.0 2128.0186359344693 0.0 2128.0186359344693 0.0 -0.5860076161826218 -0.5860076161826218 0.0 0 0.0 0.0 0.0 0.3252574989159953 S{[QG]|[NA]} 0.50473 - 206 + 1 1.374 32350.2 0.6899999976158142 6509 5393 11894 HBL1_DMSO_200M_050219_1,11904 HBL1_DMSO_200M_050219_1,11904, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11906 61.338 10.0 3029500.0 25 0 212700.0 + 45195 YQTEIGQTL 9 61 526.7662552921945 1051.517957651189 2 526.7668334841728 MULTI CID FTMS 0 0 0 11905 6335678.5 0.5349917201270366 2 -0.1097068786621093 1 Unmodified _YQTEIGQTL_ ENSG00000160752|ENST00000368356|FDPS;ENST00000453932.1_1_7:76099481-76100288:-|nuORF;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS 43.85829265575387 0.0542763391141878 3 {I|L}EC(Carbamidomethyl (C))T{I|L} 5 6 36.261 0.0 0.0 3.4484 0.0 0.0 417.2240866568514 0.0 417.2240866568514 0.0 21.836068845642203 0.0 0.0 0 0.0 0.0 1.5114393726401687 0.0 {I|L}EC(Carbamidomethyl (C))T{I|L} 3.4484 - 219 + 1 1.376 29286.9 1.0 6510 5394 11905 HBL1_DMSO_200M_050219_1,11906 HBL1_DMSO_200M_050219_1,11906,YQTEIGQTL True True YQTEIGQTL 61.337995 526.766833484173 142225712.0 11905.0 ENST00000453932.1_1_7:76099481-76100288:-|nuORF;;ENSG00000160752|ENST00000368356|FDPS;;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;;nc|ENSG00000160752|P14324-2|FDPS 6.307496070861816 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11907 61.339 21.0 3569500.0 25 0 595360.0 -1 0 94 346.70820727053183 691.4018616078637 2 346.7080261111259 MULTI CID FTMS 0 0 0 11905 2767583.75 0.2435393624257634 2 -0.1097068786621093 2 3 [R{M(Oxidation (M))|F}]GVT{I|L} 6 -1 + 47.172 0.0 0.0 6.8227 6.8227 91.573 0.0 0.0 0.0 8.99166239860314 29.636153375280184 8.99166239860314 10.929862658764264 0 0.9247425010840048 0.0 0.3807196863200844 0.7742275032520141 [R{M(Oxidation (M))|F}]GVT{I|L};[R{M(Oxidation (M))|F}]KE{I|L};[RK]{M(Oxidation (M))|F}E{I|L} 6.8227;5.2418;3.8833 -;-;- 148 1 1.376 63654.0 1.0 6511 5394 11905 HBL1_DMSO_200M_050219_1,11907 HBL1_DMSO_200M_050219_1,11907, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11908 61.34 19.0 5767300.0 25 0 1779500.0 + 22142 LPPRLSSIML 10 72 376.2262199549866 0 376.2263366580009 PEAK CID FTMS 0 0 0 11905 4090018.25 0.3157869979105649 2 -0.1097068786621093 3 Unmodified _LPPRLSSIML_ REV__ENST00000580315.1_1_17:71282696-71307081:-|nuORF;REV__ENST00000581045.1_2_17:71282696-71305904:-|nuORF 12.531546534597751 0.3556095723513364 3 M 1 -1 6.9897 0.0 0.0 0.93142 0.0 0.0 534.307880118178 82.06691156558827 616.3747916837663 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.93142 + + 14 + 1 1.376 89897.0 1.0 6512 5394 11905 HBL1_DMSO_200M_050219_1,11908 HBL1_DMSO_200M_050219_1,11908,LPPRLSSIML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11909 61.342 21.0 4901800.0 25 0 967070.0 + 10083 FPSEIVGKRI 10 80 382.5606204105771 1144.6600318319313 3 382.5605041384697 MULTI CID FTMS 0 0 0 11905 3210537.25 0.3806379527144192 2 -0.1097068786621093 4 Unmodified _FPSEIVGKRI_ ENSG00000171863|ENST00000645674|RPS7;ENST00000415804.2_1_4:4509290-4509386:+|nuORF;ENST00000426405.1_1_X:73629614-73629932:+|nuORF;ENST00000463499.1_1_4:42474097-42474295:+|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF 39.92294525591503 0.1583807461695373 3 {M(Oxidation (M))|F}PSE{I|L}VGK[R{I|L}] 10 0 + 61.904 0.0 0.0 5.4081 5.4081 87.531 0.0 0.0 0.0 25.834040958164124 3.614780490030114 3.614780490030114 12.795000083553203 0 1.1307196863200843 0.0 0.0 0.3252574989159953 + + {M(Oxidation (M))|F}PSE{I|L}VGK[R{I|L}];{M(Oxidation (M))|F}P{I|L}C{I|L}RK[R{I|L}];{M(Oxidation (M))|F}{I|L}PC{I|L}RK[R{I|L}];{M(Oxidation (M))|F}P{I|L}WWK[R{I|L}];{M(Oxidation (M))|F}{I|L}PWWK[R{I|L}] 5.4081;4.2903;3.7431;1.6455;1.0984 +;-;-;-;- + 201 + 1 1.376 95437.3 1.0 6513 5394 11905 HBL1_DMSO_200M_050219_1,11909 HBL1_DMSO_200M_050219_1,11909,FPSEIVGKRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11910 61.343 31.0 3235500.0 25 0 220800.0 + 21120 LPAPIEKTI 9 87 491.3023521134498 980.5901512936996 2 491.3029052615166 MULTI CID FTMS 0 0 0 11905 2513240.75 0.7108829271993945 -3 0.219879150390625 5 Unmodified _LPAPIEKTI_ nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 82.5293158979368 0.0169039238599547 3 {I|L}PAP{I|L}EKT{I|L} 9 0 + 95.179 0.0 0.0 9.7063 9.7063 99.472 0.0 0.0 0.0 52.53669175573954 12.25268461881508 12.25268461881508 75.89820750367856 0 1.5994850021680094 1.5228787452803376 1.4604093769761874 0.0 + + {I|L}PAP{I|L}EKT{I|L};{I|L}[VS]{I|L}TV[PG]PV;{I|L}[VS]{I|L}TV[VG]{[HG]|PP};{I|L}[VS]{I|L}P{I|L}[SG]PV 9.7063;1.9662;1.5235;1.1044 +;-;-;- + 874 + 1 1.376 79513.5 1.0 6514 5394 11905 HBL1_DMSO_200M_050219_1,11910 HBL1_DMSO_200M_050219_1,11910,LPAPIEKTI True True LPAPIEKTI 61.342709 491.302905261517 124824600.0 11905.0 nc|ENSG00000211896|P01857|IGHG1;;nc|ENSG00000211893|P01859|IGHG2;;nc|ENSG00000211897|P01860-1|IGHG3;;nc|ENSG00000211893|P01859-1|IGHG2;;nc|ENSG00000211897|P01860|IGHG3;;nc|ENSG00000211896|P01857-1|IGHG1 3.8419578075408936 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11911 61.344 37.0 1415800.0 25 0 145580.0 + 36317 SYLPEAGQY 9 74 514.2397143717894 1026.4648758103788 2 514.2404662966728 MULTI CID FTMS 0 0 0 11905 1654257.125 0.9548872207576607 2 -0.1097068786621093 6 Unmodified _SYLPEAGQY_ ENSG00000148110|ENST00000375344|MFSD14B;ENSG00000156875|ENST00000370152|MFSD14A;nc|ENSG00000148110|Q5SR56-2|MFSD14B 37.97399986684836 0.0865783450051559 3 AGQY 4 5 20.706 0.0 0.0 2.0172 0.0 0.0 589.2742457828382 0.0 589.2742457828382 0.0 -0.5086223929422573 -0.5086223929422573 0.0 0 0.0 0.0 0.0 0.805462187404089 + AGQY 2.0172 + + 176 + 1 1.376 47380.8 1.0 6515 5394 11905 HBL1_DMSO_200M_050219_1,11911 HBL1_DMSO_200M_050219_1,11911,SYLPEAGQY True True SYLPEAGQY 61.343886 514.240466296673 16905016.0 11905.0 nc|ENSG00000148110|Q5SR56-2|MFSD14B;;ENSG00000156875|ENST00000370152|MFSD14A;;ENSG00000148110|ENST00000375344|MFSD14B 5.523396333058675 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11912 61.345 65.0 1437400.0 25 0 296490.0 -1 0 104 340.2093413180756 678.4041297029512 2 340.2091552615166 MULTI CID FTMS 0 0 0 11905 1386540.5 0.0782584241759258 -3 0.219879150390625 7 3 Y 1 -1 1.5938 0.0 0.0 0.23493 0.0 0.0 339.23373282970744 173.0821932428344 512.3159260725419 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.23493 - 2 + 1 1.376 79715.6 1.0 6516 5394 11905 HBL1_DMSO_200M_050219_1,11912 HBL1_DMSO_200M_050219_1,11912, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11913 61.347 61.0 1356600.0 25 0 126640.0 + 22114 LPPPVQTQI 9 106 496.7924844808842 991.5704160285684 2 496.7926818728447 MULTI CID FTMS 0 0 0 11905 1276469.875 0.1769749988665846 16 -1.4497947692871094 8 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 57.47134341890925 0.0274820932774257 3 [{I|L}P]PNP{I|L}TQ{I|L} 9 3 + 58.892 0.0 0.0 5.9393 5.9393 58.891 0.0 0.0 0.0 18.9734948232342 8.824995917031941 8.824995917031941 0.0 0 0.9489700043360187 2.0 0.5 0.0 [{I|L}P]PNP{I|L}TQ{I|L};[{I|L}P]NPP{I|L}TQ{I|L};[{I|L}P]PPVQTQ{I|L};[{I|L}P]GGPP{I|L}TQ{I|L};[{I|L}P]PGGP{I|L}TQ{I|L};[{I|L}P]PPN{I|L}TQ{I|L};[{I|L}P]PNP{I|L}DKV;[{I|L}P]NPP{I|L}DKV;[{I|L}P]PNT[{I|L}P]Q{I|L};[{I|L}P]NPT[{I|L}P]Q{I|L} 5.9393;5.9393;5.2805;5.0106;5.0106;4.9769;4.8681;4.8681;4.4322;4.4322 -;-;+;-;-;-;-;-;-;- + 893 1 1.376 64347.0 1.0 6517 5394 11905 HBL1_DMSO_200M_050219_1,11913 HBL1_DMSO_200M_050219_1,11913,LPPPVQTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11914 61.349 70.0 969830.0 25 0 136440.0 + 3595 DAAMKAMTI 9 93 476.2351286963979 950.4557044595958 2 476.2354614138603 MULTI CID FTMS 0 0 0 11905 1166549.5 0.4442844225123627 -3 0.219879150390625 9 Unmodified _DAAMKAMTI_ ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR 60.07390631473393 0.0260411565414776 3 {[DA]|[EG]}A[YV]TA 7 5 52.073 0.0 0.0 5.4787 0.0 0.0 0.0 256.1119478815063 256.1119478815063 24.588884528927544 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.805462187404089 0.0 {[DA]|[EG]}A[YV]TA 5.4787 - 488 + 1 1.376 59118.6 1.0 6518 5394 11905 HBL1_DMSO_200M_050219_1,11914 HBL1_DMSO_200M_050219_1,11914,DAAMKAMTI True True DAAMKAMTI 61.348588 476.23546141386 35111420.0 11905.0 nc|ENSG00000160710|P55265-3|ADAR;;nc|ENSG00000160710|P55265-2|ADAR;;nc|ENSG00000160710|P55265-4|ADAR;;ENSG00000160710|ENST00000368474|ADAR;;nc|ENSG00000160710|P55265-5|ADAR 7.159919579823812 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11915 61.35 35.0 3993700.0 25 0 1115600.0 + 3908 DALEDFKKV 9 94 355.52560172223434 1063.554975766903 3 355.5254394412041 MULTI CID FTMS 0 0 0 11905 1145809.375 1.0 0 0.0 10 Unmodified _DALEDFKKV_ ENSG00000183891|ENST00000333610|TTC32 26.268140514670165 0.1969607489560049 3 {[DA]|[EG]}{I|L}ED{M(Oxidation (M))|F}KKV 9 0 + 56.354 0.0 0.0 5.2987 5.2987 86.471 0.0 0.0 0.0 45.38495738102938 5.705707356182117 5.705707356182117 10.299632233774432 0 0.3252574989159953 2.0 0.5 0.0 + + {[DA]|[EG]}{I|L}ED{M(Oxidation (M))|F}KKV;{[DA]|[EG]}{I|L}E{I|L}[YN]KV;{[DA]|[EG]}{I|L}{[YC]|[HE]}[RK]PV;{[DA]|[EG]}VEE{M(Oxidation (M))|F}KKV;{[DA]|[EG]}{I|L}{[YC]|[HE]}[RP]KV;W{I|L}E[RP][HQ]V 5.2987;4.3302;3.2508;3.183;2.6847;2.0326 +;-;-;-;-;- + 78 + 1 1.376 124588.0 1.0 6519 5394 11905 HBL1_DMSO_200M_050219_1,11915 HBL1_DMSO_200M_050219_1,11915,DALEDFKKV False True DALEDFKKV 61.349765 355.525439441204 26033076.5 11905.0 ENSG00000183891|ENST00000333610|TTC32 6.464432875315349 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11916 61.351 58.0 1981700.0 25 0 305990.0 + 4056 DALVTKNLV 9 111 486.7893029564737 971.5640529797472 2 486.7901183962822 MULTI CID FTMS 0 0 0 11905 1126344.0 0.0427979941394534 -4 0.3597526550292969 11 Unmodified _DALVTKNLV_ ENSG00000105202|ENST00000221801|FBL;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 69.10491478415734 0.0214449631113747 3 {[DA]|[EG]}{I|L}KKW{I|L}V 8 3 + 55.592 0.0 0.0 5.7219 5.7219 75.22 0.0 0.0 0.0 6.839127862539087 6.839127862539087 6.839127862539087 0.3036514138269766 0 0.9177353201839438 1.6989700043360187 0.9517188504113846 0.3252574989159953 {[DA]|[EG]}{I|L}KKW{I|L}V;{[DA]|[EG]}{I|L}VTKN{I|L}V;[W{I|L}]VTKN{I|L}V;{[DA]|[EG]}KK{I|L}W{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}KTVW{I|L}V;{[DA]|[EG]}{I|L}KK{[DA]|[EG]}{I|L}V;[KT]VQVW{I|L}V;{[DA]|[EG]}{I|L}KK{I|L}{[RE]|[WV]};[KT]N{I|L}VW{I|L}V;[W{I|L}]VTKNV{I|L} 5.7219;5.6907;5.018;4.9735;4.9313;4.7686;4.7374;4.6985;4.6364;4.3765 -;+;-;-;-;-;-;-;-;- + 1731 1 1.376 91037.4 1.0 6520 5394 11905 HBL1_DMSO_200M_050219_1,11916 HBL1_DMSO_200M_050219_1,11916,DALVTKNLV True True DALVTKNLV 61.351219 486.790118396282 147468864.0 11905.0 ENSG00000105202|ENST00000221801|FBL;;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 5.0807310740153 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11917 61.353 66.0 1183300.0 25 0 132420.0 41377 VPKTPVEI 8 83 441.7680744852922 881.5215960373844 2 441.7682983279228 MULTI CID FTMS 0 0 0 11905 1047945.125 0.5598847982048555 2 -0.1097068786621093 12 Unmodified _VPKTPVEI_ ENST00000529587.1_1_11:9806704-9806878:-|nuORF 25.399314129420983 0.5099049743284904 3 VP 2 6 44.776 0.0 0.0 5.0794 0.0 0.0 0.0 682.3783955986336 682.3783955986336 18.37659711702763 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + VP 5.0794 + + 161 + 1 1.376 64826.8 1.0 6521 5394 11905 HBL1_DMSO_200M_050219_1,11917 HBL1_DMSO_200M_050219_1,11917,VPKTPVEI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11918 61.355 102.0 1665600.0 25 0 253780.0 + 25773 NIVPVIAKA 9 132 462.7976410599391 923.5807291866782 2 462.7977783083916 MULTI CID FTMS 0 0 0 11905 794484.4375 0.930153825958166 -1 0.1029472351074218 13 Unmodified _NIVPVIAKA_ ENSG00000168385|ENST00000391971|SEPTIN2;ENSG00000184640|ENST00000427177|SEPTIN9;ENST00000592481.5_1_17:75447336-75492345:+|nuORF;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;nc|ENSG00000184640|Q9UHD8-3|SEPTIN9;nc|ENSG00000184640|Q9UHD8-4|SEPTIN9;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9;nc|ENSG00000184640|Q9UHD8-8|SEPTIN9;nc|ENSG00000184640|Q9UHD8-9|SEPTIN9 29.081581746732265 0.1611639662936252 3 {[QV]|[N{I|L}]|[RA]|[KV]}VPV{I|L}A[KA] 9 0 + 52.021 0.0 0.0 5.6325 5.6325 87.248 0.0 0.0 0.0 13.604451596058794 7.451338226439489 7.451338226439489 9.353619702831525 0 0.8494850021680094 2.0 0.0 0.4194451763165202 + + {[QV]|[N{I|L}]|[RA]|[KV]}VPV{I|L}A[KA];{[QV]|[N{I|L}]|[RA]|[KV]}VPV[KG]VV 5.6325;4.6198 +;- + 542 + 1 1.376 131915.5 1.0 6522 5394 11905 HBL1_DMSO_200M_050219_1,11918 HBL1_DMSO_200M_050219_1,11918,NIVPVIAKA False True NIVPVIAKA 61.354978 462.797778308392 7119316.0 11905.0 nc|ENSG00000184640|Q9UHD8-3|SEPTIN9;;nc|ENSG00000168385|Q15019-3|SEPTIN2;;ENST00000592481.5_1_17:75447336-75492345:+|nuORF;;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;;ENSG00000184640|ENST00000427177|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;;nc|ENSG00000168385|Q15019-2|SEPTIN2;;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9;;ENSG00000168385|ENST00000391971|SEPTIN2;;nc|ENSG00000184640|Q9UHD8-4|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-8|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-9|SEPTIN9 6.941697915395101 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11919 61.357 87.0 892210.0 25 0 86852.0 + 208 AARKGGPAGA 10 103 428.24314622881263 854.4717395244253 2 428.2428771853447 MULTI CID FTMS 0 0 0 11905 669044.75 0.4394268227994394 2 -0.1097068786621093 14 Unmodified _AARKGGPAGA_ REV__ENSG00000125834|ENST00000381482|STK35 4.3292370932331545 0.7066112369704343 3 {M(Oxidation (M))|F} 1 -1 10.969 0.0 0.0 1.2837 0.0 0.0 689.3924223630956 0.0 689.3924223630956 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2837 - 60 + 1 1.376 67250.7 1.0 6523 5394 11905 HBL1_DMSO_200M_050219_1,11919 HBL1_DMSO_200M_050219_1,11919,AARKGGPAGA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11920 61.359 75.0 1577900.0 25 0 207850.0 + 4452 DAWSGLRHV 9 128 520.7669724690506 1039.5193920049012 2 520.7672607302666 MULTI CID FTMS 0 0 0 11905 572354.875 0.8771987734494645 -1 0.1029472351074218 15 Unmodified _DAWSGLRHV_ ENSG00000160712|ENST00000368485|IL6R;nc|ENSG00000160712|P08887-2|IL6R 66.45667989310934 0.0225072657982126 3 {[DA]|[EG]}WSG{I|L}RHV 9 0 + 89.491 0.0 0.0 8.6089 8.6089 92.039 0.0 0.0 0.0 70.76737603155074 12.25268461881508 12.25268461881508 7.530834337684311 0 1.805462187404089 1.6989700043360187 0.3807196863200844 0.9247425010840048 + + {[DA]|[EG]}WSG{I|L}RHV;{[DA]|[EG]}ADSG{I|L}RHV;{[DA]|[EG]}WSG{I|L}[VG]HV;{[DA]|[EG]}WV{[SA]|[TG]}RHV;WADSG{I|L}[VG]HV;{[DA]|[EG]}ADV{[SA]|[TG]}RHV;{[DA]|[EG]}WSG[RH]{I|L}V;{[DA]|[EG]}WV[WK]HV;{[DA]|[EG]}AAMG{I|L}RHV;{[DA]|[EG]}N{[ES]|[DT]|[{I|L}C]}{I|L}RHV 8.6089;7.8844;6.8335;6.7585;6.1008;6.034;5.9149;5.8918;5.8881;5.8389 +;-;-;-;-;-;-;-;-;- + 514 + 1 1.376 94111.2 1.0 6524 5394 11905 HBL1_DMSO_200M_050219_1,11920 HBL1_DMSO_200M_050219_1,11920,DAWSGLRHV True True DAWSGLRHV 61.358642 520.767260730267 5111318.0 11905.0 nc|ENSG00000160712|P08887-2|IL6R;;ENSG00000160712|ENST00000368485|IL6R 8.335435231526693 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11921 61.369 595.0 222700.0 25 0 45958.0 -1 0 65 1082.094016675227 3243.2602206258816 3 1082.428271472454 MULTI CID FTMS 0 0 0 11905 502415.125 0.2935857477292565 2 -0.1097068786621093 16 3 C(Carbamidomethyl (C))[YG]{M(Oxidation (M))|F}RHMT{M(Oxidation (M))|F} 9 -1 27.63 0.0 0.0 0.85191 0.0 0.0 1620.567568714226 420.1882723443969 2040.7558410586228 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 C(Carbamidomethyl (C))[YG]{M(Oxidation (M))|F}RHMT{M(Oxidation (M))|F} 0.85191 - 372 + 1 1.376 118004.4 1.0 6525 5394 11905 HBL1_DMSO_200M_050219_1,11921 HBL1_DMSO_200M_050219_1,11921, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11922 61.373 181.0 837440.0 25 0 125470.0 + 39419 VALKIIRNV 9 121 342.56577916840286 1024.6755081054089 3 342.5656616091728 MULTI CID FTMS 0 0 0 11905 436580.96875 0.6670559173569393 -2 0.1711692810058593 17 Unmodified _VALKIIRNV_ ENSG00000179335|ENST00000395066|CLK3;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;ENST00000569406.5_1_15:74914809-74922221:+|nuORF;nc|ENSG00000179335|P49761-3|CLK3 22.65808497894818 0.2428932432760099 3 VA{I|L}K{I|L}S[TA]{I|L}G 10 5 73.51 0.0 0.0 7.174 0.0 0.0 0.0 68.05138574771718 68.05138574771718 62.67239972682384 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.4247425010840047 VA{I|L}K{I|L}S[TA]{I|L}G 7.174 - 482 + 1 1.376 123652.7 1.0 6526 5394 11905 HBL1_DMSO_200M_050219_1,11922 HBL1_DMSO_200M_050219_1,11922,VALKIIRNV False True VALKIIRNV 61.372601 342.565661609173 4171205.0 11905.0 ENSG00000179335|ENST00000395066|CLK3;;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;;nc|ENSG00000179335|P49761-3|CLK3;;ENST00000569406.5_1_15:74914809-74922221:+|nuORF 5.178165435791016 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11923 61.375 99.0 1679400.0 25 0 132540.0 + 26968 PEEIEKYV 8 126 503.7587745173445 1005.502996101489 2 503.7588683962822 MULTI CID FTMS 0 0 0 11905 395137.5 1.0 0 0.0 18 Unmodified _PEEIEKYV_ ENSG00000101182|ENST00000370873|PSMA7;ENST00000484488.5_1_20:60711915-60714832:-|nuORF;nc|ENSG00000101182|O14818-2|PSMA7 57.47134341890925 0.1146309765603773 3 EPE{I|L}HR 6 6 70.209 0.0 0.0 6.9825 0.0 0.0 0.0 241.09881006412343 241.09881006412343 44.17714910261766 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.4247425010840047 0.5941876774005248 EPE{I|L}HR 6.9825 - 970 + 1 1.376 127331.2 1.0 6527 5394 11905 HBL1_DMSO_200M_050219_1,11923 HBL1_DMSO_200M_050219_1,11923,PEEIEKYV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11924 61.385 580.0 377060.0 25 0 17153.0 + 41886 VQANSGAIVKL 11 188 550.3266881820472 1098.6388234308945 2 550.3273193240166 MULTI CID FTMS 0 0 0 11905 339854.15625 1.0 0 0.0 19 Unmodified _VQANSGAIVKL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 98.72992552434108 0.0003628247892426 3 VQANSQ{I|L}VK{I|L} 10 2 + 98.084 0.0 0.0 8.9278 8.9278 88.683 0.0 0.0 0.0 24.60409376976189 9.13813852383717 9.13813852383717 3.83815365980432 0 1.683324508278978 1.0457574905606752 0.8807196863200843 0.5891368308784531 VQANSQ{I|L}VK{I|L};VQANSGA{I|L}VK{I|L};VQANSQ{I|L}V{I|L}K;VQAGGSQ{I|L}VK{I|L};VQAGGSGA{I|L}VK{I|L};VQANSGA{I|L}V{I|L}K;VQANSQ{I|L}[K{I|L}]V;VQAGGSQ{I|L}V{I|L}K;VQANSGA{I|L}[K{I|L}]V;V[AG]ANSQ{I|L}VK{I|L} 8.9278;8.5784;8.096;8.0936;7.7476;7.7467;7.5468;7.2619;7.1975;7.1418 -;+;-;-;-;-;-;-;-;- + 11030 + 1 1.376 171089.4 1.0 6528 5394 11905 HBL1_DMSO_200M_050219_1,11924 HBL1_DMSO_200M_050219_1,11924,VQANSGAIVKL True True VQANSGAIVKL 61.384894 550.327319324017 3376920.5 11905.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 6.711474577585856 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11925 61.388 137.0 441550.0 25 0 25872.0 + 37971 TMVDRIEEV 9 98 546.275040413348 1090.535527893496 2 546.2758056521416 MULTI CID FTMS 0 0 0 11905 289499.59375 1.0 0 0.0 20 Unmodified _TMVDRIEEV_ ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A 32.037481411007896 0.1235546156350648 3 [VG]{[QN]|[E{I|L}]|[KN]}[DV]{M(Oxidation (M))|F}VDV 10 8 + 48.992 0.0 0.0 4.4925 4.4925 75.65 0.0 0.0 0.0 9.567242012220577 32.42054798617519 9.567242012220577 3.0102999566398125 0 0.7134679910804405 1.0457574905606752 0.3494850021680094 0.0 [VG]{[QN]|[E{I|L}]|[KN]}[DV]{M(Oxidation (M))|F}VDV;[VG]{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}V]DVDV;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}[DV]{M(Oxidation (M))|F}VDV;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]DVDV;[MT]VD[C(Carbamidomethyl (C))Q][KP]{I|L};[VG]{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}V]AEEV;[VG]{[QN]|[E{I|L}]|[KN]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}EEV;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]AEEV;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}EEV 4.4925;4.2164;3.096;2.82;2.7207;2.3135;2.152;0.91701;0.75554 -;-;-;-;-;-;-;-;- 95 1 1.376 52236.0 1.0 6529 5394 11905 HBL1_DMSO_200M_050219_1,11925 HBL1_DMSO_200M_050219_1,11925,TMVDRIEEV True True TMVDRIEEV 61.387684 546.275805652142 2105573.75 11905.0 ENSG00000073614|ENST00000399788|KDM5A;;nc|ENSG00000073614|P29375-2|KDM5A 6.060217062632243 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11927 61.392 20.0 1796800.0 25 0 180810.0 + 3909 DALEDFKKV 9 68 532.7844323426941 1063.554311752188 2 532.7848998904228 MULTI CID FTMS 0 0 0 11926 2075843.5 0.9981632843682744 1 -0.0557479858398437 1 Unmodified _DALEDFKKV_ ENSG00000183891|ENST00000333610|TTC32 26.268140514670165 0.1969607489560049 3 {[DA]|[EG]}{I|L}E{I|L}[YN]{[QV]|[N{I|L}]|[RA]|[KV]} 9 3 + 55.876 0.0 0.0 5.2537 5.2537 87.831 0.0 0.0 0.0 40.98136244196333 0.915149811213496 0.915149811213496 17.501225267833995 0 0.8494850021680094 2.0 0.4247425010840047 0.0 {[DA]|[EG]}{I|L}E{I|L}[YN]{[QV]|[N{I|L}]|[RA]|[KV]};{[DA]|[EG]}{I|L}[{M(Oxidation (M))|F}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]};[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]} 5.2537;3.6082;1.0693 -;-;- 41 + 1 1.376 33994.3 1.0 6530 5395 11926 HBL1_DMSO_200M_050219_1,11927 HBL1_DMSO_200M_050219_1,11927,DALEDFKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11928 61.393 26.0 1342900.0 25 0 141620.0 + 22149 LPPSALQSV 9 57 456.26343039887297 910.512307864546 2 456.2641174197197 MULTI CID FTMS 0 0 0 11926 1295174.0 0.4476468689320891 3 -0.2954025268554687 2 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 23.1484247019978 0.2366544122328345 3 SV 2 7 19.253 0.0 0.0 2.1145 0.0 0.0 706.4009014698179 0.0 706.4009014698179 0.0 0.5558471418748923 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + SV 2.1145 + + 80 + 1 1.376 36096.1 1.0 6531 5395 11926 HBL1_DMSO_200M_050219_1,11928 HBL1_DMSO_200M_050219_1,11928,LPPSALQSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11929 61.395 59.0 523790.0 25 0 75690.0 + 41278 VPHPGSITI 9 55 460.76312349957766 919.5116940659552 2 460.7633544802666 MULTI CID FTMS 0 0 0 11926 830211.1875 0.5685779237289224 -2 0.1569061279296875 3 Unmodified _VPHPGSITI_ ENSG00000132478|ENST00000589666|UNK 23.1484247019978 0.2366544122328345 3 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L}T{I|L} 8 6 + 34.314 0.0 0.0 3.7318 3.7318 84.22 0.0 0.0 0.0 8.071968632008435 18.829628067253168 8.071968632008435 34.31417813229345 0 0.8182503180159344 1.3979400086720375 0.4247425010840047 0.0 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L}T{I|L} 3.7318 - 38 1 1.376 28003.0 1.0 6532 5395 11926 HBL1_DMSO_200M_050219_1,11929 HBL1_DMSO_200M_050219_1,11929,VPHPGSITI False True VPHPGSITI 61.394598 460.763354480267 11294930.0 11926.0 ENSG00000132478|ENST00000589666|UNK 1.0979100863138835 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11930 61.396 54.0 717720.0 25 0 140210.0 + 27781 LPPPPPPLA 9 62 449.7730721368604 897.5315913405208 2 449.7732726931572 MULTI CID FTMS 0 0 0 11926 705345.3125 0.3846361354649648 3 -0.2954025268554687 4 Unmodified _PLPPPPPLA_ ENSG00000068489|ENST00000262293|PRR11 45.7499826716795 0.0496882803020414 3 [{I|L}P]PPPP 6 3 44.486 0.0 0.0 4.9565 0.0 0.0 0.0 296.1606045572087 296.1606045572087 32.01213124741251 0.0 0.0 0.0 0 0.6861818737241735 1.5228787452803376 0.0 0.0 + [{I|L}P]PPPP 4.9565 + + 48 1 1.376 34892.7 1.0 6533 5395 11926 HBL1_DMSO_200M_050219_1,11930 HBL1_DMSO_200M_050219_1,11930,PLPPPPPLA False False LPPPPPPLA 61.395982 449.773272693157 17202112.0 11926.0 ENSG00000068489|ENST00000262293|PRR11 2.5104558169841766 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11931 61.398 81.0 865870.0 25 0 114850.0 + 15872 ISPPVDPV 8 94 412.2303899297853 822.4462269263706 2 412.2302734255791 MULTI CID FTMS 0 0 0 11926 685550.625 0.2568314749860682 8 -0.7524604797363281 5 Unmodified _ISPPVDPV_ REV__ENSG00000123104|ENST00000381340|ITPR2 2.577480529830294 0.808687252328423 3 M 1 -1 3.0989 0.0 0.0 0.3768 0.0 0.0 483.1937377679706 205.19333826236564 688.3870760303363 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.3768 - 20 + 1 1.376 62153.8 1.0 6534 5395 11926 HBL1_DMSO_200M_050219_1,11931 HBL1_DMSO_200M_050219_1,11931,ISPPVDPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11932 61.399 50.0 1147500.0 25 0 182720.0 + 4461 DAYALNHTL 9 101 509.25362910442976 1016.4927052756595 2 509.2535888552666 MULTI CID FTMS 0 0 0 11926 622972.8125 0.0018964015130206 28 -2.3070220947265625 6 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 49.93300154707207 0.0405168250806675 3 {[DA]|[EG]}YA{I|L}N[HT]{I|L} 9 0 {[DA]|[EG]}Y + + 34.258 22.676 6.495 3.3702 3.3702 50.969 0.0 0.0 0.0 0.0 11.581531501239295 0.0 0.0 0 0.5 0.0 1.6861818737241734 0.0 + + {[DA]|[EG]}YA{I|L}N[HT]{I|L} 3.3702 + + 312 + 1 1.376 49492.4 1.0 6535 5395 11926 HBL1_DMSO_200M_050219_1,11932 HBL1_DMSO_200M_050219_1,11932,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11933 61.401 61.0 756250.0 25 0 148170.0 42244 VSLWDLLL 8 75 479.78227932734967 957.5500057214994 2 479.7817260622978 MULTI CID FTMS 0 0 0 11926 544901.3125 0.082757824973469 -3 0.225128173828125 7 Unmodified _VSLWDLLL_ ENSG00000261150|ENST00000615648|EPPK1 19.438996006549623 0.6237395211498085 3 [VS]{I|L}{M(Oxidation (M))|F}NV{I|L}GG 9 5 50.544 0.0 0.0 5.2785 0.0 0.0 0.0 68.05140863590077 68.05140863590077 37.049275299015605 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [VS]{I|L}{M(Oxidation (M))|F}NV{I|L}GG 5.2785 - 217 + 1 1.376 41994.1 1.0 6536 5395 11926 HBL1_DMSO_200M_050219_1,11933 HBL1_DMSO_200M_050219_1,11933,VSLWDLLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11934 61.403 108.0 585210.0 25 0 150940.0 -1 EGCHCDAGYV 10 76 584.2108699567232 1166.4071869802465 2 584.2114135622978 MULTI CID FTMS 0 0 0 11926 503369.78125 0.2032973511297179 -2 0.1569061279296875 8 2 Carbamidomethyl (C) _EGC(Carbamidomethyl (C))HC(Carbamidomethyl (C))DAGYV_ ENSG00000109927|ENST00000392793|TECTA 10.823927491677226 0.6659270209832991 3 SADMYV 6 -1 55.438 0.0 0.0 4.7529 0.0 0.0 482.12965611584775 0.0 482.12965611584775 0.0 47.47933455448525 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 SADMYV 4.7529 - 68 1 1.376 53223.0 1.0 6537 5395 11926 HBL1_DMSO_200M_050219_1,11934 HBL1_DMSO_200M_050219_1,11934,EGCHCDAGYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11935 61.405 89.0 777540.0 25 0 66909.0 + 34909 SQIGHLQDL 9 124 505.7657437133558 1009.5169344935116 2 505.7655212283134 MULTI CID FTMS 0 0 0 11926 571850.6875 1.0 0 0.0 9 Unmodified _SQIGHLQDL_ ENSG00000092439|ENST00000646667|TRPM7 42.312485326615175 0.0627620958981271 3 {[QS]|[NT]}{I|L}GH[Q{I|L}]D{I|L} 9 0 + 35.376 0.0 0.0 3.5042 3.5042 78.718 0.0 0.0 0.0 4.762036441594198 8.57840941039747 4.762036441594198 8.57840941039747 0 1.586696871556164 0.0 0.6989700043360187 0.0 + + {[QS]|[NT]}{I|L}GH[Q{I|L}]D{I|L};{[QS]|[NT]}{I|L}GH[Q{I|L}]EV;[H{I|L}]G{[QS]|[NT]}[Q{I|L}]D{I|L};[VP]YY[Q{I|L}]D{I|L};{[HG]|PP}{I|L}{[QS]|[NT]}[Q{I|L}]D{I|L};{[HG]|PP}N{[QN]|[E{I|L}]|[KN]}{I|L}QS{I|L};[H{I|L}]GEEVVD{I|L};[VP]P[DN][Q{I|L}]D{I|L};[H{I|L}]G[TP][RD][KS];{[QS]|[NT]}{I|L}GH{[HG]|PP}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.5042;2.6545;1.0791;0.9553;0.90463;0.8025;0.77647;0.75987;0.61908;0.61078 +;-;-;-;-;-;-;-;-;- + 537 + 1 1.376 56851.3 1.0 6538 5395 11926 HBL1_DMSO_200M_050219_1,11935 HBL1_DMSO_200M_050219_1,11935,SQIGHLQDL True True SQIGHLQDL 61.404892 505.765521228313 3330483.5 11926.0 ENSG00000092439|ENST00000646667|TRPM7 3.7144885063171382 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11936 61.407 71.0 755590.0 25 0 53937.0 + 10085 FPSEIVGKRI 10 79 573.3375937203099 1144.6606345074197 2 573.3381225466728 MULTI CID FTMS 0 0 0 11926 473687.5 0.1592809270011245 3 -0.2954025268554687 10 Unmodified _FPSEIVGKRI_ ENSG00000171863|ENST00000645674|RPS7;ENST00000415804.2_1_4:4509290-4509386:+|nuORF;ENST00000426405.1_1_X:73629614-73629932:+|nuORF;ENST00000463499.1_1_4:42474097-42474295:+|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF 35.079672537005266 0.2095246155385646 3 {I|L}MSE{I|L}V 6 6 65.495 0.0 0.0 5.7218 0.0 0.0 0.0 469.2898418154013 469.2898418154013 39.29683137432591 0.0 0.0 0.0 0 0.9119543704721594 1.5228787452803376 0.0 0.0 {I|L}MSE{I|L}V 5.7218 - 296 + 1 1.376 44664.4 1.0 6539 5395 11926 HBL1_DMSO_200M_050219_1,11936 HBL1_DMSO_200M_050219_1,11936,FPSEIVGKRI False True FPSEIVGKRI 61.406582 573.338122546673 115933064.0 11926.0 ENST00000415804.2_1_4:4509290-4509386:+|nuORF;;ENST00000484240.1_1_17:44798950-44799232:-|nuORF;;ENST00000463499.1_1_4:42474097-42474295:+|nuORF;;ENSG00000171863|ENST00000645674|RPS7;;ENST00000426405.1_1_X:73629614-73629932:+|nuORF 4.804839372634888 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11937 61.408 86.0 374240.0 25 0 25449.0 + 40244 VGSRNRLA 8 78 436.7563500384719 871.4981471437437 2 436.7566100955009 MULTI CID FTMS 0 0 0 11926 405099.15625 0.1482668168674992 3 -0.2954025268554687 11 Unmodified _VGSRNRLA_ REV__ENSG00000147251|ENST00000276202|DOCK11 0.7936320650641473 0.8195151834710337 3 {I|L} 1 -1 10.713 0.0 0.0 1.2293 0.0 0.0 740.4031439472578 0.0 740.4031439472578 0.0 3.266062568876718 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2293 + + 5 + 1 1.376 32032.6 1.0 6540 5395 11926 HBL1_DMSO_200M_050219_1,11937 HBL1_DMSO_200M_050219_1,11937,VGSRNRLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11938 61.419 589.0 273350.0 25 0 28074.0 + -1 NQHCCHHL 8 206 553.2236227157055 1104.4326924982108 2 553.2236816287041 MULTI CID FTMS 0 0 0 11926 318566.625 0.7633217348968672 3 -0.2954025268554687 12 2 Carbamidomethyl (C) _NQHC(Carbamidomethyl (C))C(Carbamidomethyl (C))HHL_ REV__ENST00000557808.1_1_15:40566252-40568292:+|nuORF 14.581692164780916 0.6954967302934248 3 [AG]Y{[{M(Oxidation (M))|F}D]|MM}[YE]Q{I|L} 9 -1 [AG]Y{[{M(Oxidation (M))|F}D]|MM}[YE]Q + + 16.466 -3.7706 -0.38739 1.4909 1.4909 48.53 0.0 0.0 0.0 0.0 0.0122623118827647 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [AG]Y{[{M(Oxidation (M))|F}D]|MM}[YE]Q{I|L} 1.4909 - 444 + 1 1.376 121698.1 1.0 6541 5395 11926 HBL1_DMSO_200M_050219_1,11938 HBL1_DMSO_200M_050219_1,11938,NQHCCHHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11939 61.421 100.0 540110.0 25 0 101620.0 + 14048 IALDSHPTI 9 94 483.7667406799863 0 483.7666808962822 PEAK CID FTMS 0 0 0 11926 294975.5625 0.2326703191702604 3 -0.2954025268554687 13 Unmodified _IALDSHPTI_ ENSG00000115738|ENST00000396290|ID2 19.256988751693697 0.2078072434435185 3 A{I|L}D 3 6 17.435 0.0 0.0 1.8058 0.0 0.0 113.08699590899762 550.2625216119749 663.3495175209725 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + A{I|L}D 1.8058 + + 95 + 1 1.376 44787.3 1.0 6542 5395 11926 HBL1_DMSO_200M_050219_1,11939 HBL1_DMSO_200M_050219_1,11939,IALDSHPTI False True IALDSHPTI 61.420969 483.766680896282 14718732.0 11926.0 ENSG00000115738|ENST00000396290|ID2 3.428043524424235 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11940 61.425 228.0 508050.0 25 0 35267.0 -1 LMMPYFCL 8 122 545.7399028456585 1089.465252758117 2 545.7409545779228 MULTI CID FTMS 0 0 0 11926 275887.625 0.986839794651032 3 -0.2954025268554687 14 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))MPYFC(Carbamidomethyl (C))L_ ENSG00000139514|ENST00000380752|SLC7A1 17.086550045450526 0.6584923310065985 3 [VG]{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}V]DVM 9 -1 30.92 0.0 0.0 2.8381 0.0 0.0 0.0 96.95772036969824 96.95772036969824 4.28211852677514 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3807196863200844 0.0 [VG]{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}V]DVM 2.8381 - 314 1 1.376 94616.6 1.0 6543 5395 11926 HBL1_DMSO_200M_050219_1,11940 HBL1_DMSO_200M_050219_1,11940,LMMPYFCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11941 61.429 222.0 380640.0 25 0 41312.0 + 23656 LTRKLEKL 8 120 500.8293012889223 999.6440496446446 2 500.8293640017509 MULTI CID FTMS 0 0 0 11926 220428.546875 0.907021213122638 1 -0.0557479858398437 15 Unmodified _LTRKLEKL_ ENST00000478509.1_1_X:153674748-153677371:+|nuORF 39.94969957227396 0.2351327405675156 3 [{I|L}T]RR{I|L}T 6 4 47.497 0.0 0.0 4.7514 0.0 0.0 0.0 256.1657628825291 256.1657628825291 12.429155219028942 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.7614393726401688 0.0 [{I|L}T]RR{I|L}T 4.7514 - 962 1 1.376 66186.9 1.0 6544 5395 11926 HBL1_DMSO_200M_050219_1,11941 HBL1_DMSO_200M_050219_1,11941,LTRKLEKL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11942 61.443 800.0 233980.0 25 0 23560.0 + 29190 DAFAAAKL 8 210 403.23291642467234 0 403.2325012087822 PEAK CID FTMS 0 0 0 11926 204339.359375 0.6687387034781194 -4 0.2738380432128906 16 Unmodified _QGFAAALK_ ENSG00000103257|ENST00000261622|SLC7A5 15.847184025352805 0.4758297917908462 3 {M(Oxidation (M))|F}A 2 6 11.964 0.0 0.0 1.4872 0.0 0.0 185.08007737883844 398.236582406542 583.3166597853805 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 + {M(Oxidation (M))|F}A 1.4872 + + 7 + 1 1.376 148341.0 0.8299999833106995 6545 5395 11926 HBL1_DMSO_200M_050219_1,11942 HBL1_DMSO_200M_050219_1,11942,QGFAAALK False False DAFAAAKL 61.443273 403.232501208782 919678.0 11926.0 ENSG00000103257|ENST00000261622|SLC7A5 3.397890567779541 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11944 61.448 7.0 7659300.0 25 0 1323600.0 + 10060 FPRHIEPEL 9 76 379.8731103052179 1136.5975015158538 3 379.8730956912041 MULTI CID FTMS 0 0 0 11943 6492560.0 0.8767736271090903 2 -0.239654541015625 1 Unmodified _FPRHIEPEL_ ENSG00000122674|ENST00000325974|CCZ1;ENSG00000146574|ENST00000316731|CCZ1B 17.44264345198275 0.3645313841742926 3 [TP]{I|L}[EP]{I|L}EPE{I|L} 10 4 + 34.085 0.0 0.0 2.9989 2.9989 82.592 0.0 0.0 0.0 3.80211241711606 18.6008406144498 3.80211241711606 34.085390679490075 0 0.3182503180159344 0.0 0.4247425010840047 0.0 [TP]{I|L}[EP]{I|L}EPE{I|L} 2.9989 - 74 1 1.376 49369.6 1.0 6546 5396 11943 HBL1_DMSO_200M_050219_1,11944 HBL1_DMSO_200M_050219_1,11944,FPRHIEPEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11945 61.449 9.4 5803000.0 25 0 697180.0 + 10059 FPRHIEPEL 9 63 569.3065152697677 1136.598477606335 2 569.3064453005791 MULTI CID FTMS 0 0 0 11943 5903483.5 0.9011899373584612 2 -0.239654541015625 2 Unmodified _FPRHIEPEL_ ENSG00000122674|ENST00000325974|CCZ1;ENSG00000146574|ENST00000316731|CCZ1B 35.61225514009592 0.0995432151795903 3 [EP]{I|L}[TP]{I|L}EPE{I|L} 10 4 + 62.722 0.0 0.0 5.5184 5.5184 84.545 0.0 0.0 0.0 13.310927088276785 7.9677166083928626 7.9677166083928626 7.9677166083928626 0 0.9957416651753048 1.6989700043360187 0.6109243748081782 0.0 [EP]{I|L}[TP]{I|L}EPE{I|L};[EP]{I|L}[TP]{I|L}E{I|L}[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E[RH]PE{I|L};[EP]{I|L}[RH]{M(Oxidation (M))|F}PE{I|L};[EP]{I|L}[RH]{M(Oxidation (M))|F}{I|L}[EP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PE[RH]{I|L}[EP];{[QN]|[E{I|L}]|[KN]}P[TP]{I|L}EPE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PE[RH]PE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E[RH]{I|L}[EP];{[QN]|[E{I|L}]|[KN]}P[TP]{I|L}E{I|L}[EP] 5.5184;4.8174;4.3473;4.189;3.4879;3.4139;3.4013;3.3288;3.2838;2.7003 -;-;-;-;-;-;-;-;-;- 121 1 1.376 46851.2 1.0 6547 5396 11943 HBL1_DMSO_200M_050219_1,11945 HBL1_DMSO_200M_050219_1,11945,FPRHIEPEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11946 61.45 15.0 1653500.0 25 0 384930.0 + 29705 QPISTQTLV 9 54 493.7792900540562 985.5440271749123 2 493.7793762087822 MULTI CID FTMS 0 0 0 11943 3781574.0 0.8141359568601426 2 -0.239654541015625 3 Unmodified _QPISTQTLV_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4 19.256988751693697 0.3154191944385105 3 QT[{I|L}V] 4 5 23.232 0.0 0.0 2.3573 0.0 0.0 526.277635642775 0.0 526.277635642775 0.0 9.737059521965108 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.3807196863200844 + QT[{I|L}V] 2.3573 + + 32 1 1.376 26327.3 1.0 6548 5396 11943 HBL1_DMSO_200M_050219_1,11946 HBL1_DMSO_200M_050219_1,11946,QPISTQTLV False True QPISTQTLV 61.450054 493.779376208782 43591640.0 11943.0 ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4 1.8310585816701253 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11947 61.451 27.0 2982900.0 25 0 652260.0 -1 0 91 348.7224742160391 695.4303954988782 2 348.7222778201103 MULTI CID FTMS 0 0 0 11943 2229765.0 0.3168020984454744 -1 0.0557479858398437 4 3 M 1 -1 2.4743 0.0 0.0 0.35579 0.0 0.0 479.30376083266566 82.06698785953358 561.3707486921992 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.35579 - 5 + 1 1.376 71398.3 1.0 6549 5396 11943 HBL1_DMSO_200M_050219_1,11947 HBL1_DMSO_200M_050219_1,11947, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11948 61.452 18.0 4171700.0 25 0 428170.0 + 3019 AVLDGRELRV 10 76 376.555781162844 1126.6455140887322 3 376.5557433962822 MULTI CID FTMS 0 0 0 11943 1597945.5 0.4349441650644906 -1 0.0557479858398437 5 Unmodified _AVLDGRELRV_ ENSG00000161547|ENST00000359995|SRSF2;nc|ENSG00000161547|Q01130-2|SRSF2 28.49450938151212 0.328477364964909 3 AV{I|L}DVNEV 8 4 82.173 0.0 0.0 7.2936 0.0 0.0 0.0 284.17402063541255 284.17402063541255 70.39056080931422 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.805462187404089 AV{I|L}DVNEV 7.2936 - 129 + 1 1.376 66233.3 1.0 6550 5396 11943 HBL1_DMSO_200M_050219_1,11948 HBL1_DMSO_200M_050219_1,11948,AVLDGRELRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11949 61.454 43.0 1175400.0 25 0 206190.0 37341 TIYYGEQRST 10 70 609.2945278494476 1216.5745027656951 2 609.2943603396416 MULTI CID FTMS 0 0 0 11943 1499380.625 0.9336702005892804 1 -0.1137008666992187 6 Unmodified _TIYYGEQRST_ ENSG00000127083|ENST00000375550|OMD 10.073929032068715 0.6785112666868882 3 ER{M(Oxidation (M))|F}KST 6 8 32.63 0.0 0.0 2.6821 0.0 0.0 450.1750064027668 0.0 450.1750064027668 0.0 18.817365755370403 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 ER{M(Oxidation (M))|F}KST 2.6821 - 198 + 1 1.376 41060.1 1.0 6551 5396 11943 HBL1_DMSO_200M_050219_1,11949 HBL1_DMSO_200M_050219_1,11949,TIYYGEQRST False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11950 61.455 76.0 1645000.0 25 0 160720.0 + 45042 YPYEHSYGL 9 129 564.7535189901482 1127.4924850470964 2 564.7537719607353 MULTI CID FTMS 0 0 0 11943 629014.0625 0.8488134588577574 4 -0.3566703796386719 7 Unmodified _YPYEHSYGL_ ENSG00000119787|ENST00000378954|ATL2;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2 70.71552829651908 0.0208223590022201 3 YPEYHSYG{I|L} 9 2 + 62.732 0.0 0.0 5.5638 5.5638 84.716 0.0 0.0 0.0 35.95122859678435 9.297283670189458 9.297283670189458 8.006440778389035 0 1.385151878060192 1.6989700043360187 0.6307196863200843 0.0 YPEYHSYG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EHYSG{I|L}Y;YPQWDSYG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EHSYG{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EHY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;YPQW[R{M(Oxidation (M))|F}][MT];YPQW{I|L}[YG]{[DS]|[MA]|[CV]|TT};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[PA]E{M(Oxidation (M))|F}{I|L}Y;{[YC]|[HE]}YPYSG{I|L}Y;{[YC]|[HE]}YPSYG{I|L}Y 5.5638;4.8537;4.6945;4.68;3.5756;2.6756;2.4087;2.2252;2.1727;1.9989 -;-;-;-;-;-;-;-;-;- 630 + 1 1.376 96217.4 1.0 6552 5396 11943 HBL1_DMSO_200M_050219_1,11950 HBL1_DMSO_200M_050219_1,11950,YPYEHSYGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11951 61.457 69.0 1184500.0 25 0 79939.0 + -1 FVDPAQITM 9 108 519.2518913262958 1036.4892297193917 2 519.2522460818291 MULTI CID FTMS 0 0 0 11943 610820.375 0.6291403927387075 -1 0.0557479858398437 8 Oxidation (M) _FVDPAQITM(Oxidation (M))_ ENSG00000167325|ENST00000300738|RRM1 24.020572477871973 0.2255576514309169 3 [{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}H]|[RQ]}ATV 7 -1 25.991 0.0 0.0 2.5076 0.0 0.0 0.0 232.0643953409325 232.0643953409325 8.020914555458909 0.0 0.0 0.0 0 0.0 2.0 0.9247425010840048 0.0 [{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}H]|[RQ]}ATV 2.5076 - 281 1 1.376 69064.6 1.0 6553 5396 11943 HBL1_DMSO_200M_050219_1,11951 HBL1_DMSO_200M_050219_1,11951,FVDPAQITM False False FVDPAQITM 61.457038 519.252246081829 9512525.0 11943.0 ENSG00000167325|ENST00000300738|RRM1 3.34028430779775 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11952 61.46 124.0 586190.0 25 0 86320.0 40043 VGGFLGGL 8 124 360.20684867659014 718.3991444199803 2 360.2064391970634 MULTI CID FTMS 0 0 0 11943 508079.65625 0.0667418782581235 4 -0.3566703796386719 9 Unmodified _VGGFLGGL_ ENSG00000078579|ENST00000180166|FGF20 2.889219685676258 0.8067950007271085 3 {I|L} 1 7 8.9794 0.0 0.0 1.2499 0.0 0.0 587.3037139774007 0.0 587.3037139774007 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2499 + + 3 + 1 1.376 61263.9 1.0 6554 5396 11943 HBL1_DMSO_200M_050219_1,11952 HBL1_DMSO_200M_050219_1,11952,VGGFLGGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11953 61.47 610.0 213100.0 25 0 13851.0 + 9220 FGIDRDAIAQA 11 134 588.803953390061 1175.593353846922 2 588.8045532107353 MULTI CID FTMS 0 0 0 11943 237977.390625 0.4971686895768565 -1 0.0557479858398437 10 Unmodified _FGIDRDAIAQA_ ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53259774-53260053:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;nc|ENSG00000163931|P29401-2|TKT 55.23464941255904 0.0886405999673349 3 DA{I|L}AQA 6 5 42.312 0.0 0.0 3.5992 0.0 0.0 588.3149281232437 0.0 588.3149281232437 0.0 23.728721920568248 0.0 0.0 0 0.8851518780601922 0.0 0.6549471895720984 0.0 + DA{I|L}AQA 3.5992 + + 532 1 1.376 98750.6 1.0 6555 5396 11943 HBL1_DMSO_200M_050219_1,11953 HBL1_DMSO_200M_050219_1,11953,FGIDRDAIAQA True True FGIDRDAIAQA 61.470256 588.804553210735 2819838.0 11943.0 ENST00000461139.5_1_3:53259774-53265639:-|nuORF;;ENST00000460343.5_1_3:53259774-53260053:-|nuORF;;ENSG00000163931|ENST00000462138|TKT;;nc|ENSG00000163931|P29401-2|TKT 5.945063591003418 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11954 61.482 681.0 316380.0 25 0 149010.0 -1 0 131 631.3451159682767 630.3378395016766 1 631.3453246951103 MULTI CID FTMS 0 0 0 11943 200468.84375 0.4793051237058674 29 -2.3293418884277344 11 3 [{I|L}A]PPS{M(Oxidation (M))|F} 6 -1 + 44.659 0.0 0.0 7.085 7.085 83.11 0.0 0.0 0.0 13.29880475240077 2.549796647429808 2.549796647429808 2.549796647429808 0 0.6549471895720984 1.0457574905606752 0.905855760735872 0.0 [{I|L}A]PPS{M(Oxidation (M))|F};[{I|L}A]PMVT;[{I|L}A]PMS{I|L};[{I|L}A]PPAY;[{I|L}A]PMTV;[{I|L}A]DA{[QN]|[E{I|L}]|[KN]};[{I|L}A]P{M(Oxidation (M))|F}A{I|L};[{I|L}A]PY[PA];[{I|L}A][WE]{I|L};[{I|L}A]{M(Oxidation (M))|F}PA{I|L} 7.085;6.6805;5.9672;5.6772;5.6525;4.9752;4.2928;4.1658;3.4728;3.3934 -;-;-;-;-;-;-;-;-;- 197 + 1 1.376 162882.2 1.0 6556 5396 11943 HBL1_DMSO_200M_050219_1,11954 HBL1_DMSO_200M_050219_1,11954, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11955 61.494 696.0 208410.0 25 0 14832.0 + 31569 RQMAEIAVNAV 11 169 601.3209493629391 1200.6273457926782 2 601.3217040896416 MULTI CID FTMS 0 0 0 11943 176113.53125 1.0 0 0.0 12 Unmodified _RQMAEIAVNAV_ ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5 28.23362336080872 0.4292685378469897 3 [Q{I|L}]E[MN]{I|L}AVNAV 11 4 + 73.914 0.0 0.0 6.1563 6.1563 83.078 0.0 0.0 0.0 4.357285695614365 16.575773191777934 4.357285695614365 4.357285695614365 0 0.3054621874040891 0.6575773191777937 0.805462187404089 0.4247425010840047 [Q{I|L}]E[MN]{I|L}AVNAV;{[QN]|[E{I|L}]|[KN]}Q[MN]{I|L}AVNAV;[VS]{I|L}A{[ET]|[MV]}QAVNAV;[Q{I|L}]E[MN]{I|L}AVGGAV;{[VA]|[{I|L}G]}AE[MN]{I|L}AVNAV;[AG]{I|L}E[MN]{I|L}AVNAV;[Q{I|L}]E{I|L}[MN]AVNAV;[{I|L}V]SA{[ET]|[MV]}QAVNAV;[Q{I|L}][DV]C(Carbamidomethyl (C)){I|L}AVNAV;[Q{I|L}][MN]E{I|L}AVNAV 6.1563;5.7934;5.4645;5.396;5.3905;5.3284;5.2889;5.2608;5.1958;5.1577 -;-;-;-;-;-;-;-;-;- 5497 1 1.376 105808.5 1.0 6557 5396 11943 HBL1_DMSO_200M_050219_1,11955 HBL1_DMSO_200M_050219_1,11955,RQMAEIAVNAV False True RQMAEIAVNAV 61.494204 601.321704089642 1041893.5625 11943.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5;;ENST00000423695.6_1_5:10250480-10261980:+|nuORF 5.6521674791971845 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11956 61.508 800.0 322150.0 25 0 24126.0 27572 PLCRPVVG 8 241 420.7435151090008 839.4724772848016 2 421.2447387576103 MULTI CID FTMS 0 0 0 11943 159622.28125 0.2247358384971833 4 -0.3566703796386719 13 Unmodified _PLCRPVVG_ ENST00000461479.1_1_1:155658724-155658949:+|nuORF 2.577480529830294 0.808687252328423 3 {I|L} 1 7 10.181 0.0 0.0 1.2128 0.0 0.0 708.3776114174173 0.0 708.3776114174173 0.0 1.1466838550445324 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2128 + + 92 + 1 1.376 199900.1 0.8799999952316284 6558 5396 11943 HBL1_DMSO_200M_050219_1,11956 HBL1_DMSO_200M_050219_1,11956,PLCRPVVG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11957 61.521 771.0 184130.0 25 0 12529.0 + 16915 KIIYIVHDEV 10 189 614.8505688347162 1227.6865847362324 2 614.8492309451103 MULTI CID FTMS 0 0 0 11943 130049.2734375 0.0185692055794599 6 -0.5530891418457031 14 Unmodified _KIIYIVHDEV_ ENSG00000100567|ENST00000216455|PSMA3;nc|ENSG00000100567|P25788-2|PSMA3 28.23362336080872 0.3343390635154222 3 [K{I|L}]{I|L}Y{I|L}V 6 4 30.495 0.0 0.0 2.4839 0.0 0.0 0.0 495.1850037980301 495.1850037980301 5.342070740137544 0.0 0.0 0.0 0 0.8185220919262379 0.2924298239020636 0.0 0.0 + [K{I|L}]{I|L}Y{I|L}V 2.4839 + + 5612 + 1 1.376 109329.7 1.0 6559 5396 11943 HBL1_DMSO_200M_050219_1,11957 HBL1_DMSO_200M_050219_1,11957,KIIYIVHDEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11958 61.536 783.0 402200.0 25 0 29512.0 5919 DPYSRISQEDG 11 201 633.7835926832987 1265.552632433397 2 633.7837402224541 MULTI CID FTMS 0 0 0 11943 131030.71875 0.0698725085675407 -4 0.2808761596679687 15 Unmodified _DPYSRISQEDG_ ENSG00000092148|ENST00000399332|HECTD1 27.22323531849824 0.4529927607131788 3 DPYGNRDSET{I|L} 11 6 + 110.54 0.0 0.0 8.7342 8.7342 88.661 0.0 0.0 0.0 73.59351366060389 10.721883857489516 10.721883857489516 3.997618925252226 0 1.9049471895720984 1.6989700043360187 0.4604093769761876 1.4124379954164592 DPYGNRDSET{I|L};DPYGNRD[WM]{I|L};DPYGGGRDSET{I|L};DPYGNRD{[ET]|[MV]}S{I|L};DPYGGGRD[WM]{I|L};DPYGNRD{[ET]|[MV]}{I|L}S;DPYGNR[{I|L}P][MT]C;DPYGNRD{[ET]|[MV]}TV;DPYGGGRD{[ET]|[MV]}S{I|L};DPYGN[VG]D{[ET]|[MV]}S{I|L} 8.7342;8.4184;8.0129;7.7869;7.6942;7.2015;7.1868;7.0879;7.0655;6.7299 -;-;-;-;-;-;-;-;-;- 9498 + 1 1.376 230217.0 1.0 6560 5396 11943 HBL1_DMSO_200M_050219_1,11958 HBL1_DMSO_200M_050219_1,11958,DPYSRISQEDG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11959 61.55 800.0 388100.0 25 0 28379.0 + 15387 IPNYRNAVI 9 265 530.3002572554166 0 530.3005859255791 PEAK CID FTMS 0 0 0 11943 117925.0859375 0.3839038001015916 -1 0.0557479858398437 16 Unmodified _IPNYRNAVI_ ENSG00000161542|ENST00000446526|PRPSAP1;nc|ENSG00000161542|Q14558|PRPSAP1 48.345845343767074 0.036192834052621 3 PNY[KQ]TE 7 6 18.227 0.0 0.0 1.7218 0.0 0.0 113.08139256480464 82.06697260074452 195.1483651655492 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.7638793319624578 0.5941876774005248 PNY[KQ]TE 1.7218 - 1225 + 1 1.376 243033.6 0.9300000071525574 6561 5396 11943 HBL1_DMSO_200M_050219_1,11959 HBL1_DMSO_200M_050219_1,11959,IPNYRNAVI True True IPNYRNAVI 61.550208 530.300585925579 2097680.25 11943.0 ENSG00000161542|ENST00000446526|PRPSAP1;;nc|ENSG00000161542|Q14558|PRPSAP1 4.001411358515422 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11960 61.557 315.0 630980.0 25 0 107590.0 23618 LTPVLTSSI 9 192 465.7780359490842 929.5415189649684 2 465.7780944705009 MULTI CID FTMS 0 0 0 11943 97343.8125 0.425922953253516 -1 0.0557479858398437 17 Unmodified _LTPVLTSSI_ ENSG00000167720|ENST00000344595|SRR 16.942295170755138 0.3780752226737986 3 KAW 3 9 21.335 0.0 0.0 2.2952 0.0 0.0 0.0 541.3121431940061 541.3121431940061 2.5269751594335297 0.0 0.0 0.0 0 0.4423877696554315 0.0 0.0 0.0 KAW 2.2952 - 987 + 1 1.376 152975.9 1.0 6562 5396 11943 HBL1_DMSO_200M_050219_1,11960 HBL1_DMSO_200M_050219_1,11960,LTPVLTSSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11962 61.561 48.0 1303900.0 25 0 120880.0 + 18118 KTLERSYLL 9 93 561.8297077409638 1121.6448625487276 2 561.8298828005791 MULTI CID FTMS 0 0 0 11961 1101365.125 1.0 0 0.0 1 Unmodified _KTLERSYLL_ ENSG00000167325|ENST00000300738|RRM1 29.84058131909904 0.1515068451768857 3 KT{I|L}EK{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L} 9 2 + 52.414 0.0 0.0 4.6729 4.6729 85.578 0.0 0.0 0.0 16.413738860427962 9.3404794283504 9.3404794283504 15.71456278567765 0 1.274227503252014 0.0 0.3252574989159953 0.0 KT{I|L}EK{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L};KT{I|L}EK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TK;KT{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TK;{[TV]|[{I|L}S]}{[ET]|[MV]}{I|L}[YR]K{I|L};{[TV]|[{I|L}S]}{[ET]|[MV]}{I|L}[YR]{I|L}K 4.6729;3.2719;1.8282;1.4412;0.87275 -;-;-;-;- 173 + 1 1.37 52824.1 1.0 6563 5397 11961 HBL1_DMSO_200M_050219_1,11962 HBL1_DMSO_200M_050219_1,11962,KTLERSYLL False True KTLERSYLL 61.5614 561.829882800579 19297166.0 11961.0 ENSG00000167325|ENST00000300738|RRM1 4.602023919423421 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11963 61.564 133.0 569800.0 25 0 57206.0 + + -1 IYADYARSL 9 92 536.2744752935283 1070.5343976538566 2 536.2750121951103 MULTI CID FTMS 0 0 0 11961 530014.4375 0.6547527811951476 1 -0.1259536743164062 2 Oxidation (M) _LYASTIKM(Oxidation (M))E_ ENST00000604714.1_1_10:122667871-122668222:+|nuORF;ENSG00000120008|ENST00000263461|WDR11;ENST00000497136.6_1_10:122666276-122668222:+|nuORF 18.1463463914782 0.3454829746528889 3 {I|L}YADY[WK]{I|L} 8 -1 + 60.979 0.0 0.0 5.6961 5.6961 89.153 0.0 0.0 0.0 35.99587119029232 2.3510009525032416 2.3510009525032416 16.251837901751003 0 0.3054621874040891 2.0 0.0 0.0 {I|L}YADY[WK]{I|L};{I|L}YA[NS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L};{I|L}YA[NS][RH][NP] 5.6961;4.178;3.6673 -;-;- 136 + 1 1.37 63406.6 1.0 6564 5397 11961 HBL1_DMSO_200M_050219_1,11963 HBL1_DMSO_200M_050219_1,11963,LYASTIKME False False IYADYARSL 61.564118 536.27501219511 7070030.0 11961.0 ENST00000604714.1_1_10:122667871-122668222:+|nuORF;;ENSG00000120008|ENST00000263461|WDR11;;ENST00000497136.6_1_10:122666276-122668222:+|nuORF 4.699401060740153 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11964 61.565 14.0 3404500.0 25 0 856020.0 + 38937 TVMDSKIVQV 10 68 560.307109767732 1118.5996666022638 2 560.3077880740166 MULTI CID FTMS 0 0 0 11961 5130178.5 0.5410002208216463 -1 0.1137008666992187 3 Unmodified _TVMDSKIVQV_ ENSG00000025800|ENST00000373625|KPNA6;ENSG00000114030|ENST00000344337|KPNA1;ENSG00000196911|ENST00000368564|KPNA5 38.61474834105838 0.1721950110283317 3 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VQTVV 10 5 + 62.254 0.0 0.0 5.5654 5.5654 83.882 0.0 0.0 0.0 24.81939364284848 33.96082806091883 24.81939364284848 6.901056208558032 0 0.5 2.0 0.9802046884880936 0.3807196863200844 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VQTVV;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VTVQV;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V[AG]TVV;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VTQVV;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VT[AG]VV;[KS][MD]{I|L}VQTVV;[KS][MD]{I|L}VTVQV;[KS][MD]{I|L}V[AG]TVV;[KS][MD]{I|L}VTQVV;[KS][MD]{I|L}VT[AG]VV 5.5654;4.9485;4.7461;4.6868;3.8675;2.7512;2.1343;1.9319;1.8726;1.0533 -;-;-;-;-;-;-;-;-;- 120 1 1.37 42140.8 1.0 6565 5397 11961 HBL1_DMSO_200M_050219_1,11964 HBL1_DMSO_200M_050219_1,11964,TVMDSKIVQV False True TVMDSKIVQV 61.565297 560.307788074017 111469752.0 11961.0 ENSG00000114030|ENST00000344337|KPNA1;;ENSG00000025800|ENST00000373625|KPNA6;;ENSG00000196911|ENST00000368564|KPNA5 5.849230130513509 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11965 61.566 14.0 3690100.0 25 0 305350.0 + 24778 MPHSIMRI 8 84 328.84182860261467 983.503656408044 3 328.8419067263603 MULTI CID FTMS 0 0 0 11961 4543220.5 1.0 0 0.0 4 Unmodified _MPHSIMRI_ ENSG00000138107|ENST00000369905|ACTR1A;ENST00000480947.1_1_10:104243895-104247966:-|nuORF 19.361941925380144 0.6248778452073445 3 MPHS{I|L}{I|L}{[WT]|[RM]} 8 2 + 54.117 0.0 0.0 5.5025 5.5025 79.086 0.0 0.0 0.0 43.63290021996811 0.6694678963061307 0.6694678963061307 3.0102999566398125 0 0.0 0.0 0.7742275032520141 0.0 MPHS{I|L}{I|L}{[WT]|[RM]};MPH{I|L}S{I|L}{[WT]|[RM]};MPHS{I|L}{I|L}S{I|L}S;MPHS{I|L}M[R{I|L}];MPH{I|L}S{I|L}S{I|L}S;MPH{I|L}SM[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{I|L}S{M(Oxidation (M))|F}{[TV]|[{I|L}S]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}S{I|L}{M(Oxidation (M))|F}{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}V][YR]{I|L}{[WT]|[RM]} 5.5025;5.1964;5.1619;5.0174;4.8559;4.7113;3.8993;3.5933;0.25055 -;-;-;+;-;-;-;-;- + 125 + 1 1.37 49989.3 1.0 6566 5397 11961 HBL1_DMSO_200M_050219_1,11965 HBL1_DMSO_200M_050219_1,11965,MPHSIMRI False True MPHSIMRI 61.566474 328.84190672636 27718262.0 11961.0 ENST00000480947.1_1_10:104243895-104247966:-|nuORF;;ENSG00000138107|ENST00000369905|ACTR1A 3.86232590675354 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11966 61.568 75.0 988200.0 25 0 190060.0 -1 0 79 357.2357904856442 712.4570280380884 2 357.2355224490166 MULTI CID FTMS 0 0 0 11961 2349393.0 1.0 0 0.0 5 3 {I|L} 1 -1 10.596 0.0 0.0 1.4872 0.0 0.0 581.3622384646494 0.0 581.3622384646494 0.0 5.991838268834169 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4872 - 8 + 1 1.37 66612.9 1.0 6567 5397 11961 HBL1_DMSO_200M_050219_1,11966 HBL1_DMSO_200M_050219_1,11966, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11967 61.57 61.0 1355800.0 25 0 245930.0 39409 VALDRLDRIG 10 77 564.32965573315 1126.6447585331 2 564.3301879763603 MULTI CID FTMS 0 0 0 11961 1686919.875 1.0 0 0.0 6 Unmodified _VALDRLDRIG_ ENSG00000138622|ENST00000261917|HCN4 22.736283301280096 0.4578556481593033 3 V[W{I|L}]VNEVR{I|L} 9 6 + 53.694 0.0 0.0 4.7658 4.7658 83.561 0.0 0.0 0.0 40.84076652809856 9.665762445130497 9.665762445130497 9.208187539523747 0 0.4247425010840047 0.0 0.4247425010840047 0.3807196863200844 V[W{I|L}]VNEVR{I|L};V[W{I|L}]VGGEVR{I|L} 4.7658;3.9485 -;- 137 + 1 1.37 72904.3 1.0 6568 5397 11961 HBL1_DMSO_200M_050219_1,11967 HBL1_DMSO_200M_050219_1,11967,VALDRLDRIG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11968 61.571 29.0 1023400.0 25 0 100520.0 -1 SLFVWKCV 8 63 519.7767579428091 1037.5389629524182 2 519.7770873904228 MULTI CID FTMS 0 0 0 11961 1522108.25 0.7559172421362356 -1 0.1137008666992187 7 Carbamidomethyl (C) _SLFVWKC(Carbamidomethyl (C))V_ ENSG00000165521|ENST00000554922|EML5;nc|ENSG00000165521|Q05BV3|EML5 10.183394434864962 0.7604730176254005 3 {[TV]|[{I|L}S]}{[WT]|[RM]}NTV 7 -1 35.943 0.0 0.0 3.4643 0.0 0.0 0.0 233.1188939429057 233.1188939429057 19.745523661053667 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.6462566630072955 0.3494850021680094 {[TV]|[{I|L}S]}{[WT]|[RM]}NTV 3.4643 - 99 1 1.37 30767.6 1.0 6569 5397 11961 HBL1_DMSO_200M_050219_1,11968 HBL1_DMSO_200M_050219_1,11968,SLFVWKCV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11969 61.573 91.0 748930.0 25 0 115410.0 + 32056 RVLEKLGVTV 10 83 557.3527661167161 1112.690979300232 2 557.3531371951103 MULTI CID FTMS 0 0 0 11961 1257634.75 0.9913125591854136 -1 0.1137008666992187 8 Unmodified _RVLEKLGVTV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 21.59015148037692 0.4836074274810599 3 V{M(Oxidation (M))|F}K{I|L}KE 6 7 68.404 0.0 0.0 6.1476 0.0 0.0 0.0 365.2315157526001 365.2315157526001 51.79342449193868 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 V{M(Oxidation (M))|F}K{I|L}KE 6.1476 - 199 + 1 1.37 61153.0 1.0 6570 5397 11961 HBL1_DMSO_200M_050219_1,11969 HBL1_DMSO_200M_050219_1,11969,RVLEKLGVTV False True RVLEKLGVTV 61.572941 557.35313719511 8747742.0 11961.0 ENSG00000138071|ENST00000260641|ACTR2;;nc|ENSG00000138071|P61160-2|ACTR2 2.7854014237721763 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11970 61.576 173.0 601470.0 25 0 43852.0 + 30188 QVVGDVDTSL 10 135 516.7633495183392 1031.5121461034782 2 516.7645141482353 MULTI CID FTMS 0 0 0 11961 676377.0 1.0 0 0.0 9 Unmodified _QVVGDVDTSL_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 34.40172386719151 0.2166836008404837 3 [{I|L}T]A{I|L} 4 8 39.411 0.0 0.0 3.8207 0.0 0.0 0.0 630.236181097872 630.236181097872 19.27013445889981 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.0994850021680094 0.0 [{I|L}T]A{I|L} 3.8207 - 1045 1 1.37 82053.8 1.0 6571 5397 11961 HBL1_DMSO_200M_050219_1,11970 HBL1_DMSO_200M_050219_1,11970,QVVGDVDTSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11971 61.58 191.0 496220.0 25 0 47827.0 + 18767 LAMGPPRV 8 119 420.7435151090008 839.4724772848016 2 420.7433959841728 MULTI CID FTMS 0 0 0 11961 612798.3125 0.3550915255563169 5 -0.4393882751464844 10 Unmodified _LAMGPPRV_ REV__ENST00000431601.5_1_3:39148536-39148707:-|nuORF 2.889219685676258 0.8067950007271085 3 {I|L} 1 -1 10.089 0.0 0.0 1.2018 0.0 0.0 708.3774740883157 0.0 708.3774740883157 0.0 0.6196092369567179 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2018 + + 34 + 1 1.37 77791.4 1.0 6572 5397 11961 HBL1_DMSO_200M_050219_1,11971 HBL1_DMSO_200M_050219_1,11971,LAMGPPRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11972 61.583 176.0 503880.0 25 0 155560.0 -1 0 93 466.2658827676893 465.2586063010893 1 466.2648498415947 MULTI CID FTMS 0 0 0 11961 436999.5625 0.0259712646092967 -4 0.32635498046875 11 3 R 1 -1 18.411 0.0 0.0 3.9572 0.0 0.0 291.1465590372206 0.0 291.1465590372206 0.0 0.4415784460158463 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 R 3.9572 - 27 + 1 1.37 74379.0 1.0 6573 5397 11961 HBL1_DMSO_200M_050219_1,11972 HBL1_DMSO_200M_050219_1,11972, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11973 61.589 298.0 421300.0 25 0 36220.0 + 27477 PKGKGGTG 8 165 351.200183662369 700.385814391538 2 351.2001830935478 MULTI CID FTMS 0 0 0 11961 351373.53125 1.0 0 0.0 12 Unmodified _PKGKGGTG_ REV__ENST00000590478.1_1_17:33569582-33569933:-|nuORF 0.6903765706972694 0.8201419426409876 3 {I|L} 1 -1 10.278 0.0 0.0 1.4674 0.0 0.0 569.2911011120443 0.0 569.2911011120443 0.0 0.4447054166839059 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4674 - 40 + 1 1.37 101058.8 1.0 6574 5397 11961 HBL1_DMSO_200M_050219_1,11973 HBL1_DMSO_200M_050219_1,11973,PKGKGGTG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11974 61.598 507.0 370820.0 25 0 18714.0 + 42535 KALPDSMVSV 10 200 523.7817134727931 0 523.7821533083916 PEAK CID FTMS 0 0 0 11961 347300.375 1.0 0 0.0 13 Unmodified _VTLTPCAGVSV_ ENSG00000188554|ENST00000590996|NBR1;nc|ENSG00000188554|Q14596-2|NBR1 45.69961567697781 0.0845035679490679 3 SVM 3 10 24.882 0.0 0.0 2.3798 0.0 0.0 117.07219315010045 608.306784009959 725.3789771600594 0.0 0.0 0.0 0.0 0 0.7887254899964358 0.0 0.3807196863200844 0.0 SVM 2.3798 - 958 + 1 1.37 156434.1 1.0 6575 5397 11961 HBL1_DMSO_200M_050219_1,11974 HBL1_DMSO_200M_050219_1,11974,VTLTPCAGVSV True False KALPDSMVSV 61.597808 523.782153308392 2937702.5 11961.0 ENSG00000188554|ENST00000590996|NBR1;;nc|ENSG00000188554|Q14596-2|NBR1 6.055324713389079 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11975 61.608 608.0 416370.0 25 0 38465.0 + 43046 VYFVQKNSL 9 199 549.3026143329756 1096.5906757327512 2 549.3032714724541 MULTI CID FTMS 0 0 0 11961 207395.71875 0.2688553230507121 -3 0.2234077453613281 14 Unmodified _VYFVQKNSL_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 92.4914307365334 0.0139747738690111 3 VY{M(Oxidation (M))|F}VQ{[QN]|[E{I|L}]|[KN]}V 8 2 87.261 0.0 0.0 7.9575 0.0 0.0 0.0 116.05106531314686 116.05106531314686 50.358043114803735 0.0 0.0 0.0 0 0.8494850021680094 2.0 1.2544321917401078 1.4361818737241734 VY{M(Oxidation (M))|F}VQ{[QN]|[E{I|L}]|[KN]}V 7.9575 - 4666 + 1 1.37 193750.2 1.0 6576 5397 11961 HBL1_DMSO_200M_050219_1,11975 HBL1_DMSO_200M_050219_1,11975,VYFVQKNSL True True VYFVQKNSL 61.608441 549.303271472454 5682263.0 11961.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 7.011749744415283 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11976 61.619 623.0 186980.0 25 0 15156.0 -1 ITYNECMTQV 10 157 637.7742620125834 0 637.7736694216728 PEAK CID FTMS 0 0 0 11961 196770.390625 1.0 0 0.0 15 Carbamidomethyl (C),Oxidation (M) _ITYNEC(Carbamidomethyl (C))M(Oxidation (M))TQV_ ENSG00000172188|ENST00000641580|OR4C11 12.240655878213236 0.3578162629684178 3 {M(Oxidation (M))|F} 1 -1 7.4743 0.0 0.0 0.58689 0.0 0.0 346.18291015622304 777.2572115533811 1123.4401217096042 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.58689 + + 89 + 1 1.37 89810.8 1.0 6577 5397 11961 HBL1_DMSO_200M_050219_1,11976 HBL1_DMSO_200M_050219_1,11976,ITYNECMTQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11977 61.631 670.0 162820.0 25 0 13019.0 + 7061 GQWPQDAEAVQRV 13 98 742.3670519597707 1482.7195509863411 2 742.3663818240166 MULTI CID FTMS 0 0 0 11961 184242.171875 1.0 0 0.0 16 Unmodified _EELKAHWKWEQ_ ENSG00000165271|ENST00000297990|NOL6;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6 4.897010918128616 0.8520435188433833 3 {[QG]|[NA]}WPQWEAVQ[RV] 12 11 + 46.794 0.0 0.0 3.1559 3.1559 67.648 0.0 0.0 0.0 26.911677396591145 3.556518697048716 3.556518697048716 0.3476210625921183 0 0.3494850021680094 0.0 0.0 0.4247425010840047 {[QG]|[NA]}WPQWEAVQ[RV];{[QG]|[NA]}WPQDAEAVQ[RV];{[QG]|[NA]}ADPQWEAVQ[RV];{[QG]|[NA]}ADPQDAEAVQ[RV];{[QG]|[NA]}WP[AG]WEAVQ[RV];{[QG]|[NA]}WPQWEAV[AG][RV];{[QG]|[NA]}WPQDAEAV[AG][RV];{[QG]|[NA]}WP[AG]DAEAVQ[RV];{[QG]|[NA]}WP{[WS]|[C(Carbamidomethyl (C)){I|L}]}D[KP]Q[RV];{[QG]|[NA]}WPQD[RD]VQ[RV] 3.1559;3.1325;2.6899;2.6681;2.5423;2.5423;2.5206;2.5206;2.4698;2.0943 -;-;-;-;-;-;-;-;-;- 1263 + 1 1.37 80346.7 1.0 6578 5397 11961 HBL1_DMSO_200M_050219_1,11977 HBL1_DMSO_200M_050219_1,11977,EELKAHWKWEQ False False GQWPQDAEAVQRV 61.631016 742.366381824017 3049286.75 11961.0 ENSG00000165271|ENST00000297990|NOL6;;nc|ENSG00000165271|Q9H6R4-2|NOL6;;nc|ENSG00000165271|Q9H6R4-4|NOL6 7.194568634033203 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11978 61.643 648.0 186530.0 25 0 13848.0 -1 0 141 604.2957698174155 1809.8654800524464 3 604.2951537966728 MULTI CID FTMS 0 0 0 11961 116955.890625 1.0 0 0.0 17 3 {I|L}Q 2 -1 29.38 0.0 0.0 1.6233 0.0 0.0 1550.7117457768588 0.0 1550.7117457768588 0.0 13.552560410204071 0.0 0.0 0 0.5 0.0 0.0 0.6421590589602533 {I|L}Q 1.6233 - 785 + 1 1.37 97881.0 1.0 6579 5397 11961 HBL1_DMSO_200M_050219_1,11978 HBL1_DMSO_200M_050219_1,11978, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11979 61.655 676.0 209650.0 25 0 15611.0 + 13494 HLYEEKFESI 10 160 647.8192348996039 1293.6239168660077 2 647.8185912966728 MULTI CID FTMS 0 0 0 11961 170639.953125 0.8657409704866861 -1 0.1137008666992187 18 Unmodified _HLYEEKFESI_ ENSG00000181555|ENST00000409792|SETD2;nc|ENSG00000181555|Q9BYW2-2|SETD2;nc|ENSG00000181555|Q9BYW2-3|SETD2 94.90867108109512 0.0089818344207408 3 [H{I|L}]YEEKE{M(Oxidation (M))|F}S{I|L} 10 2 + 95.545 0.0 0.0 7.3859 7.3859 82.336 0.0 0.0 0.0 0.8361343778773289 41.35992191423391 0.8361343778773289 1.5051499783199065 0 2.2856668758921828 1.6989700043360187 0.9604093769761876 0.0 [H{I|L}]YEEKE{M(Oxidation (M))|F}S{I|L};[H{I|L}]YEEK{M(Oxidation (M))|F}ES{I|L};{I|L}HYA{I|L}YEWS{I|L};H{I|L}YA{I|L}YEWS{I|L};[H{I|L}]YETRE{M(Oxidation (M))|F}S{I|L};[H{I|L}]YETR{M(Oxidation (M))|F}ES{I|L};{I|L}HYA{I|L}YEWTV;{I|L}HDEKE{M(Oxidation (M))|F}[YT]{I|L};[H{I|L}]YE[PG]{I|L}HES{I|L};{I|L}HP{M(Oxidation (M))|F}KE{M(Oxidation (M))|F}[YT]{I|L} 7.3859;7.2695;6.94;6.6151;6.5142;6.3978;6.3623;6.2086;6.1075;6.0922 -;+;-;-;-;-;-;-;-;- + 9354 1 1.37 105910.6 1.0 6580 5397 11961 HBL1_DMSO_200M_050219_1,11979 HBL1_DMSO_200M_050219_1,11979,HLYEEKFESI True True HLYEEKFESI 61.655253 647.818591296673 2637564.0 11961.0 nc|ENSG00000181555|Q9BYW2-2|SETD2;;ENSG00000181555|ENST00000409792|SETD2;;nc|ENSG00000181555|Q9BYW2-3|SETD2 8.535886287689209 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11980 61.668 740.0 160230.0 25 0 62859.0 + -1 NMDRKEMLKYM 11 107 745.8437377810478 0 745.8437377810478 PEAK CID FTMS 0 0 0 -1 0 19 2 Oxidation (M) _NMDRKEM(Oxidation (M))LKYM(Oxidation (M))_ REV__ENSG00000164307|ENST00000443439|ERAP1;REV__ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;REV__nc|ENSG00000164307|Q9NZ08-2|ERAP1 5.296884461304476 0.47618401536486 3 PN{I|L}NAD[YT]K 9 -1 46.978 0.0 0.0 3.1536 0.0 0.0 245.0833697841065 225.088189946936 470.1715597310425 0.0 0.0 0.0 0.0 0 0.8882104921644451 0.0 0.0 1.024227503252014 PN{I|L}NAD[YT]K 3.1536 - 258 + 1 1.37 85154.0 1.0 6581 5397 11961 HBL1_DMSO_200M_050219_1,11980 HBL1_DMSO_200M_050219_1,11980,NMDRKEMLKYM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 11981 61.683 800.0 234570.0 25 0 21880.0 -1 0 118 978.9369239187486 1955.859294904297 2 979.4369994997978 MULTI CID FTMS 0 0 0 11961 152804.609375 0.7234625700492927 -3 0.2234077453613281 20 3 VEVTT 5 -1 22.451 0.0 0.0 1.1479 0.0 0.0 994.3407534998032 429.2257622399762 1423.5665157397796 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3778623208748888 0.0 VEVTT 1.1479 - 1254 + 1 1.37 129284.1 0.9700000286102296 6582 5397 11961 HBL1_DMSO_200M_050219_1,11981 HBL1_DMSO_200M_050219_1,11981, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11983 61.687 1.5 26610000.0 25 0 2630800.0 + 4057 DALVTKNLV 9 67 486.7893029564737 971.5640529797472 2 486.7906371951103 MULTI CID FTMS 0 0 0 11982 26317682.0 1.0 0 0.0 1 Unmodified _DALVTKNLV_ ENSG00000105202|ENST00000221801|FBL;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 30.63653989081413 0.1413794767160703 3 {[DA]|[EG]}{I|L} 3 6 21.655 0.0 0.0 2.2289 0.0 0.0 0.0 669.392336021016 669.392336021016 0.4786926469850527 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.0 0.0 + {[DA]|[EG]}{I|L} 2.2289 + + 92 1 1.359 36652.6 1.0 6583 5398 11982 HBL1_DMSO_200M_050219_1,11983 HBL1_DMSO_200M_050219_1,11983,DALVTKNLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11984 61.689 4.4 13932000.0 25 0 3686000.0 -1 0 70 340.2093413180756 678.4041297029512 2 340.2090942263603 MULTI CID FTMS 0 0 0 11982 12143850.0 0.6854170970330962 1 -0.0291175842285156 2 3 W 1 -1 0.48455 0.0 0.0 0.071425 0.0 0.0 362.50143302502 126.80474268131094 489.30617570633086 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.071425 - 1 + 1 1.359 57634.6 1.0 6584 5398 11982 HBL1_DMSO_200M_050219_1,11984 HBL1_DMSO_200M_050219_1,11984, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 11985 61.69 1.3 30128000.0 25 0 3270300.0 + 2309 AQIGSYVHV 9 71 487.2589136786344 972.5032744240688 2 487.2596313357353 MULTI CID FTMS 0 0 0 11982 34155700.0 1.0 0 0.0 3 Unmodified _AQIGSYVHV_ ENSG00000166847|ENST00000300087|DCTN5;ENST00000566053.5_1_16:23652819-23678462:+|nuORF;nc|ENSG00000166847|Q9BTE1-2|DCTN5 23.1484247019978 0.2366544122328345 3 {I|L}[CS]VHV 6 4 16.911 0.0 0.0 1.7389 0.0 0.0 316.17278233598125 0.0 316.17278233598125 0.0 1.4536501951208454 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}[CS]VHV 1.7389 - 56 + 1 1.359 35415.1 1.0 6585 5398 11982 HBL1_DMSO_200M_050219_1,11985 HBL1_DMSO_200M_050219_1,11985,AQIGSYVHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11986 61.691 9.3 4261200.0 25 0 692030.0 26245 NQKSTVVI 8 58 444.7608338159213 887.5071146986427 2 444.7611572146416 MULTI CID FTMS 0 0 0 11982 7250640.0 1.0 0 0.0 4 Unmodified _NQKSTVVI_ ENSG00000158683|ENST00000289672|PKD1L1;nc|ENSG00000158683|Q8TDX9-2|PKD1L1 19.256988751693697 0.6264283240490721 3 TVV{I|L} 4 4 45.745 0.0 0.0 5.1544 0.0 0.0 457.231737205275 0.0 457.231737205275 0.0 37.78659694992122 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 + TVV{I|L} 5.1544 + + 25 1 1.359 39623.3 1.0 6586 5398 11982 HBL1_DMSO_200M_050219_1,11986 HBL1_DMSO_200M_050219_1,11986,NQKSTVVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11987 61.692 11.0 3900300.0 25 0 1061000.0 42245 VSLWDLLL 8 66 479.78227932734967 957.5500057214994 2 479.7825195193291 MULTI CID FTMS 0 0 0 11982 6584287.5 1.0 0 0.0 5 Unmodified _VSLWDLLL_ ENSG00000261150|ENST00000615648|EPPK1 19.438996006549623 0.6237395211498085 3 [VS]{I|L}{M(Oxidation (M))|F}NV{I|L}N 8 4 53.977 0.0 0.0 5.637 0.0 0.0 0.0 68.05140100650624 68.05140100650624 41.5030565586067 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [VS]{I|L}{M(Oxidation (M))|F}NV{I|L}N 5.637 - 160 + 1 1.359 38226.3 1.0 6587 5398 11982 HBL1_DMSO_200M_050219_1,11987 HBL1_DMSO_200M_050219_1,11987,VSLWDLLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11988 61.694 75.0 830100.0 25 0 125520.0 + 44640 YPFKPPKV 8 80 325.86048683472575 974.5596311043772 3 325.8601867556572 MULTI CID FTMS 0 0 0 11982 2372908.5 0.0307640729085561 31 -2.314888000488281 6 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 15.847184025352805 0.6768015514314958 3 YP{M(Oxidation (M))|F}KPPKV 8 0 + 46.76 0.0 0.0 4.7981 4.7981 87.325 0.0 0.0 0.0 36.4824284987496 4.166138687697661 4.166138687697661 33.114852606147885 0 0.0 0.8860566476931632 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T][KS]HKV 4.7981;1.4001;1.02 +;-;- + 73 + 1 1.359 57004.1 1.0 6588 5398 11982 HBL1_DMSO_200M_050219_1,11988 HBL1_DMSO_200M_050219_1,11988,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11989 61.695 14.0 3143900.0 25 0 494120.0 26923 PDSFNIPGSS 10 73 510.73519197882905 1019.455831024458 2 510.7356140017509 MULTI CID FTMS 0 0 0 11982 2173873.0 0.2503528638401628 -3 0.2954025268554687 7 Unmodified _PDSFNIPGSS_ ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5 18.1463463914782 0.5430639438673815 3 [DP]S{M(Oxidation (M))|F}NE 6 5 30.01 0.0 0.0 2.9437 0.0 0.0 0.0 327.16662138994565 327.16662138994565 10.971862449770065 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.5 [DP]S{M(Oxidation (M))|F}NE 2.9437 - 119 1 1.359 44465.5 1.0 6589 5398 11982 HBL1_DMSO_200M_050219_1,11989 HBL1_DMSO_200M_050219_1,11989,PDSFNIPGSS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11990 61.696 22.0 1468800.0 25 0 136800.0 + 22150 LPPSALQSV 9 61 456.26343039887297 910.512307864546 2 456.2635070681572 MULTI CID FTMS 0 0 0 11982 2136376.0 0.7383888398482836 6 -0.5585899353027344 8 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 26.88365393820708 0.1891292719743517 3 [{I|L}P]{[SA]|[TG]}P{I|L}QSV 9 2 + 44.543 0.0 0.0 4.8921 4.8921 83.963 0.0 0.0 0.0 12.191512336730028 13.239087409443188 12.191512336730028 9.208187539523747 0 0.7429928190999391 1.6989700043360187 0.0 0.0 [{I|L}P]{[SA]|[TG]}P{I|L}QSV;[{I|L}P]{[SA]|[TG]}P{I|L}[AG]SV;[{I|L}P]{[SA]|[TG]}PG[{I|L}A]SV;[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV 4.8921;3.8808;3.8808;2.2026;1.1853 -;-;-;-;- 116 1 1.359 32359.0 1.0 6590 5398 11982 HBL1_DMSO_200M_050219_1,11990 HBL1_DMSO_200M_050219_1,11990,LPPSALQSV False True LPPSALQSV 61.696153 456.263507068157 75485310.0 11982.0 nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;nc|ENSG00000178999|Q96GD4-2|AURKB 4.395521640777588 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11991 61.697 26.0 2166900.0 25 0 108270.0 + 21121 LPAPIEKTI 9 91 491.3023521134498 980.5901512936996 2 491.3022949099541 MULTI CID FTMS 0 0 0 11982 1880793.625 0.5319920415893147 1 -0.0291175842285156 9 Unmodified _LPAPIEKTI_ nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 41.95555342248728 0.0647214845423414 3 {I|L}PAP{I|L}EKT{I|L} 9 0 + 69.618 0.0 0.0 7.0996 7.0996 81.675 0.0 0.0 0.0 42.66331332614404 9.149891278662396 9.149891278662396 1.677805497702991 0 1.2302046884880935 1.3010299956639813 0.531234684152075 0.0 + + {I|L}PAP{I|L}EKT{I|L};{I|L}PA{I|L}PEKT{I|L} 7.0996;6.9285 +;- + 422 + 1 1.359 49374.6 1.0 6591 5398 11982 HBL1_DMSO_200M_050219_1,11991 HBL1_DMSO_200M_050219_1,11991,LPAPIEKTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 11992 61.699 29.0 1455600.0 25 0 197400.0 + 18356 KVIDEIYRV 9 52 567.8294536889867 1133.6443544447734 2 567.8295776247978 MULTI CID FTMS 0 0 0 11982 1734973.5 0.8283755176680038 1 -0.0291175842285156 10 Unmodified _KVLYRWNR_ ENSG00000143756|ENST00000366862|FBXO28 16.942295170755138 0.6606234159769251 3 KV{I|L}DR 5 4 52.206 0.0 0.0 4.6052 0.0 0.0 0.0 519.2626436822874 519.2626436822874 45.21652514092061 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 KV{I|L}DR 4.6052 - 43 + 1 1.359 39479.3 1.0 6592 5398 11982 HBL1_DMSO_200M_050219_1,11992 HBL1_DMSO_200M_050219_1,11992,KVLYRWNR False False KVIDEIYRV 61.698509 567.829577624798 13159303.0 11982.0 ENSG00000143756|ENST00000366862|FBXO28 1.1740296681722004 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11993 61.7 28.0 1696400.0 25 0 187930.0 + 45766 YYITNDTVQTY 11 58 690.8192090097036 1379.6238650862072 2 690.8198119997978 MULTI CID FTMS 0 0 0 11982 1469009.625 0.1242114652941995 -3 0.2954025268554687 11 Unmodified _YYITNDTVQTY_ ENSG00000144028|ENST00000323853|SNRNP200 55.50274090549119 0.0873970505193986 3 YYS{I|L}QDT 7 7 40.45 0.0 0.0 2.932 0.0 0.0 0.0 506.2302242993509 506.2302242993509 10.910838337099165 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 YYS{I|L}QDT 2.932 - 1014 1 1.359 40351.9 1.0 6593 5398 11982 HBL1_DMSO_200M_050219_1,11993 HBL1_DMSO_200M_050219_1,11993,YYITNDTVQTY True True YYITNDTVQTY 61.699688 690.819811999798 294806856.0 11982.0 ENSG00000144028|ENST00000323853|SNRNP200 8.159722010294596 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11994 61.701 43.0 1487800.0 25 0 145120.0 + 2973 AVIEHLERL 9 81 360.5448856289518 1078.6128274870557 3 360.5448486208916 MULTI CID FTMS 0 0 0 11982 1440249.625 0.7212316777404323 -2 0.239654541015625 12 Unmodified _AVIEHLERL_ ENSG00000257218|ENST00000551765|GATC 24.99096001346401 0.2132109383330889 3 {[VA]|[{I|L}G]}{I|L}EH{I|L}E[R{I|L}] 9 0 + 63.606 0.0 0.0 5.897 5.897 77.08 0.0 0.0 0.0 23.851971076465475 0.9691001300805624 0.9691001300805624 0.9691001300805624 0 0.3494850021680094 2.0 0.4247425010840047 0.0 + + {[VA]|[{I|L}G]}{I|L}EH{I|L}E[R{I|L}];{[VA]|[{I|L}G]}{I|L}EH{I|L}{I|L}{[RE]|[WV]};{[VA]|[{I|L}G]}{I|L}E{I|L}HE[R{I|L}];{[VA]|[{I|L}G]}{I|L}E{I|L}H{I|L}{[RE]|[WV]};{[VA]|[{I|L}G]}{I|L}{I|L}EHE[R{I|L}];{[VA]|[{I|L}G]}{I|L}{I|L}EH{I|L}{[RE]|[WV]} 5.897;5.8072;5.6179;5.5281;5.3388;5.249 +;-;-;-;-;- + 170 + 1 1.359 59585.0 1.0 6594 5398 11982 HBL1_DMSO_200M_050219_1,11994 HBL1_DMSO_200M_050219_1,11994,AVIEHLERL False True AVIEHLERL 61.700878 360.544848620892 36372603.0 11982.0 ENSG00000257218|ENST00000551765|GATC 5.15636412302653 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11995 61.702 45.0 1190200.0 25 0 161840.0 41378 VPKTPVEI 8 68 441.7680744852922 881.5215960373844 2 441.7683593630791 MULTI CID FTMS 0 0 0 11982 1364863.625 0.7292045900402204 6 -0.5585899353027344 13 Unmodified _VPKTPVEI_ ENST00000529587.1_1_11:9806704-9806878:-|nuORF 19.256988751693697 0.6264283240490721 3 VP 2 6 45.217 0.0 0.0 5.1294 0.0 0.0 0.0 682.3787293436358 682.3787293436358 17.05591267411002 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VP 5.1294 + + 153 + 1 1.359 48306.0 1.0 6595 5398 11982 HBL1_DMSO_200M_050219_1,11995 HBL1_DMSO_200M_050219_1,11995,VPKTPVEI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 11996 61.703 41.0 808310.0 25 0 196350.0 -1 EGCHCDAGYV 10 45 584.2108699567232 1166.4071869802465 2 584.2116577029228 MULTI CID FTMS 0 0 0 11982 1374440.5 0.55509910078736 1 -0.0291175842285156 14 2 Carbamidomethyl (C) _EGC(Carbamidomethyl (C))HC(Carbamidomethyl (C))DAGYV_ ENSG00000109927|ENST00000392793|TECTA 7.289230182591677 0.6929195370588109 3 YV 2 -1 22.959 0.0 0.0 1.9683 0.0 0.0 886.2644861637642 0.0 886.2644861637642 0.0 3.4703253979145643 0.0 0.0 0 0.5 0.0 0.0 0.0 YV 1.9683 + + 19 + 1 1.359 34913.0 1.0 6596 5398 11982 HBL1_DMSO_200M_050219_1,11996 HBL1_DMSO_200M_050219_1,11996,EGCHCDAGYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11997 61.705 63.0 823850.0 25 0 186970.0 + 18086 KTIEDDLVSA 10 74 545.78497310662 1089.55539328004 2 545.7850829958916 MULTI CID FTMS 0 0 0 11982 1027608.875 0.1006820646385813 -3 0.2954025268554687 15 Unmodified _KTIEDDLVSA_ ENSG00000177192|ENST00000376649|PUS1;ENST00000544662.1_1_12:132414461-132416977:+|nuORF;nc|ENSG00000177192|Q9Y606-2|PUS1 43.9818466556824 0.1155196613165264 3 PEDD{I|L}V{[SA]|[TG]} 8 3 50.839 0.0 0.0 4.666 0.0 0.0 245.1744557111344 0.0 245.1744557111344 0.0 32.880325230808154 0.0 0.0 0 0.8807196863200843 0.0 1.2302046884880935 0.0 PEDD{I|L}V{[SA]|[TG]} 4.666 - 182 1 1.359 48501.7 1.0 6597 5398 11982 HBL1_DMSO_200M_050219_1,11997 HBL1_DMSO_200M_050219_1,11997,KTIEDDLVSA True True KTIEDDLVSA 61.704832 545.785082995892 131999336.0 11982.0 ENSG00000177192|ENST00000376649|PUS1;;nc|ENSG00000177192|Q9Y606-2|PUS1;;ENST00000544662.1_1_12:132414461-132416977:+|nuORF 7.878331502278645 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11998 61.706 57.0 668060.0 25 0 79996.0 + 41279 VPHPGSITI 9 75 460.76312349957766 919.5116940659552 2 460.7633849978447 MULTI CID FTMS 0 0 0 11982 878737.1875 0.6018114102710074 1 -0.0291175842285156 16 Unmodified _VPHPGSITI_ ENSG00000132478|ENST00000589666|UNK 46.92087301778293 0.0471210510596396 3 T{I|L} 2 7 26.211 0.0 0.0 2.8506 0.0 0.0 687.3688087893913 0.0 687.3688087893913 0.0 12.74227503252014 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 + T{I|L} 2.8506 + + 62 + 1 1.359 34982.3 1.0 6598 5398 11982 HBL1_DMSO_200M_050219_1,11998 HBL1_DMSO_200M_050219_1,11998,VPHPGSITI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 11999 61.708 73.0 732800.0 25 0 64705.0 + 22115 LPPPVQTQI 9 91 496.7924844808842 991.5704160285684 2 496.7921020388603 MULTI CID FTMS 0 0 0 11982 814208.875 0.1128852451220504 20 -1.6539192199707031 17 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 30.22481116460888 0.1466181017706357 3 [{I|L}P]PPVQD{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 47.062 0.0 0.0 4.7462 4.7462 54.798 0.0 0.0 0.0 12.871060930365694 5.642492736872597 5.642492736872597 0.0 0 0.5 2.0 0.0 0.0 [{I|L}P]PPVQD{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PNP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPN{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PGGP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPV[AG]D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPGG{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[VP]PP{I|L}QD{[QV]|[N{I|L}]|[RA]|[KV]};[VP]PPQ{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]};[VP]PQP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]} 4.7462;4.7462;4.4426;3.8175;3.8175;3.5139;3.4481;3.1445;3.1126;2.8409 -;-;-;-;-;-;-;-;-;- 451 1 1.359 46686.7 1.0 6599 5398 11982 HBL1_DMSO_200M_050219_1,11999 HBL1_DMSO_200M_050219_1,11999,LPPPVQTQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12000 61.709 62.0 669820.0 25 0 65425.0 + 3596 DAAMKAMTI 9 79 476.2351286963979 950.4557044595958 2 476.2356750369072 MULTI CID FTMS 0 0 0 11982 774722.3125 0.2950556793488015 1 -0.0291175842285156 18 Unmodified _DAAMKAMTI_ ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR 24.99096001346401 0.2132109383330889 3 {[DA]|[EG]}AMS 5 5 49.208 0.0 0.0 5.1773 0.0 0.0 0.0 472.27390466861567 472.27390466861567 30.0 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[DA]|[EG]}AMS 5.1773 - 96 + 1 1.359 37233.6 1.0 6600 5398 11982 HBL1_DMSO_200M_050219_1,12000 HBL1_DMSO_200M_050219_1,12000,DAAMKAMTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12001 61.711 66.0 797440.0 25 0 49768.0 + 41902 VQEQNFPTV 9 97 531.2665694709665 1060.5185860087329 2 531.2664672732353 MULTI CID FTMS 0 0 0 11982 715311.5625 0.3618994595501171 -2 0.239654541015625 19 Unmodified _VQEQNFPTV_ ENST00000352527.5_1_1:6086454-6100615:+|nuORF 74.92900055777586 0.0191935851694334 3 {M(Oxidation (M))|F}PTV 4 5 42.454 0.0 0.0 4.0031 0.0 0.0 598.2718036374423 0.0 598.2718036374423 0.0 11.149954683873862 0.0 0.0 0 0.9247425010840048 0.0 1.055462187404089 0.0 + {M(Oxidation (M))|F}PTV 4.0031 + + 372 + 1 1.359 52143.1 1.0 6601 5398 11982 HBL1_DMSO_200M_050219_1,12001 HBL1_DMSO_200M_050219_1,12001,VQEQNFPTV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12002 61.712 47.0 620360.0 25 0 67408.0 5865 DPYCGLGFAL 10 60 528.2481694679377 1054.481786002675 2 528.2490112185478 MULTI CID FTMS 0 0 0 11982 677003.875 1.0 0 0.0 20 Unmodified _DPYCGLGFAL_ ENSG00000066084|ENST00000301180|DIP2B;ENSG00000160305|ENST00000417564|DIP2A;ENST00000472364.1_1_21:47974114-47978399:+|nuORF;ENST00000481883.1_1_21:47976701-47976983:+|nuORF;nc|ENSG00000160305|Q14689-6|DIP2A 15.847184025352805 0.5816416552707754 3 DPY 3 7 51.995 0.0 0.0 4.9308 0.0 0.0 0.0 676.3165987604124 676.3165987604124 40.73572462447597 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + DPY 4.9308 + + 19 + 1 1.359 29249.7 1.0 6602 5398 11982 HBL1_DMSO_200M_050219_1,12002 HBL1_DMSO_200M_050219_1,12002,DPYCGLGFAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12004 61.716 7.4 6779700.0 25 0 1662100.0 -1 0 60 348.7224742160391 695.4303954988782 2 348.7223083376884 MULTI CID FTMS 0 0 0 12003 1501785.25 0.2133716865295048 2 -0.2541694641113281 1 3 P 1 -1 1.9897 0.0 0.0 0.28611 0.0 0.0 475.2990763844235 120.05079828433828 595.3498746687617 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.28611 - 3 + 1 1.359 46317.3 1.0 6603 5399 12003 HBL1_DMSO_200M_050219_1,12004 HBL1_DMSO_200M_050219_1,12004, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12005 61.718 19.0 2149300.0 25 0 197560.0 + 3020 AVLDGRELRV 10 57 376.555781162844 1126.6455140887322 3 376.5557739138603 MULTI CID FTMS 0 0 0 12003 869604.4375 0.2366972941222422 2 -0.2541694641113281 2 Unmodified _AVLDGRELRV_ ENSG00000161547|ENST00000359995|SRSF2;nc|ENSG00000161547|Q01130-2|SRSF2 19.361941925380144 0.5226674314761524 3 AV{I|L}DV{[QD]|[EN]|[WG]|[KD]|[RS]}V[R{I|L}] 10 4 + 67.695 0.0 0.0 6.0085 6.0085 77.145 0.0 0.0 0.0 62.210084362531575 4.884381005764311 4.884381005764311 0.796896906561031 0 0.3252574989159953 2.0 0.0 0.3807196863200844 AV{I|L}DV{[QD]|[EN]|[WG]|[KD]|[RS]}V[R{I|L}];AVVEV{[QD]|[EN]|[WG]|[KD]|[RS]}V[R{I|L}];AV{I|L}{[CP]|[EA]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[R{I|L}];AVV[DV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[R{I|L}] 6.0085;5.9378;4.3442;4.2735 -;-;-;- 79 + 1 1.359 42163.0 1.0 6604 5399 12003 HBL1_DMSO_200M_050219_1,12005 HBL1_DMSO_200M_050219_1,12005,AVLDGRELRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12006 61.719 34.0 1511700.0 25 0 199560.0 -1 APMACHEGGV 10 104 522.7136714547337 1043.4127899762673 2 522.7136108279228 MULTI CID FTMS 0 0 0 12003 872537.4375 0.8642890945263875 -3 0.2687721252441406 3 Carbamidomethyl (C),Oxidation (M) _APM(Oxidation (M))AC(Carbamidomethyl (C))HEGGV_ ENSG00000114648|ENST00000232766|KLHL18;nc|ENSG00000114648|O94889-2|KLHL18 11.640296217721598 0.652229146672156 3 {[QD]|[EN]|[WG]|[KD]|[RS]}YC(Carbamidomethyl (C))[{M(Oxidation (M))|F}V]NV 8 -1 {[QD]|[EN]|[WG]|[KD]|[RS]}YC(Carbamidomethyl (C))[{M(Oxidation (M))|F}V]N + + 13.099 6.1926 0.66851 1.2554 1.2554 48.443 0.0 0.0 0.0 0.0 -7.998329938818838 -7.998329938818838 0.0 0 0.0 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}YC(Carbamidomethyl (C))[{M(Oxidation (M))|F}V]NV 1.2554 - 208 + 1 1.359 49221.8 1.0 6605 5399 12003 HBL1_DMSO_200M_050219_1,12006 HBL1_DMSO_200M_050219_1,12006,APMACHEGGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12007 61.72 18.0 2298200.0 25 0 194970.0 + 13783 HSIPVTVEV 9 81 490.77394398818006 979.5333350431602 2 490.7740966677666 MULTI CID FTMS 0 0 0 12003 839371.0 0.5402546329167494 1 -0.0878982543945312 4 Unmodified _HSIPVTVEV_ ENSG00000108840|ENST00000682912|HDAC5;nc|ENSG00000108840|Q9UQL6-2|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5 32.30548876998284 0.1201446275138228 3 [PA]{I|L}HA[{I|L}P]AP 9 8 26.041 0.0 0.0 2.6585 0.0 0.0 0.0 109.00307121136407 109.00307121136407 2.3957751657678763 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [PA]{I|L}HA[{I|L}P]AP 2.6585 - 189 1 1.359 37989.6 1.0 6606 5399 12003 HBL1_DMSO_200M_050219_1,12007 HBL1_DMSO_200M_050219_1,12007,HSIPVTVEV True True HSIPVTVEV 61.720007 490.774096667767 8471550.0 12003.0 nc|ENSG00000108840|Q9UQL6-2|HDAC5;;nc|ENSG00000108840|Q9UQL6-3|HDAC5;;ENSG00000108840|ENST00000682912|HDAC5 5.723545074462891 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12008 61.722 72.0 939190.0 25 0 158190.0 -1 RRAGPALS 8 103 435.2511139900161 868.4876750468321 2 435.2513000369072 MULTI CID FTMS 0 0 0 12003 791859.9375 0.6866907585708713 7 -0.709442138671875 5 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RRAGPALS_ ENST00000478568.1_3_1:247095131-247095230:-|nuORF 2.577480529830294 0.808687252328423 3 {I|L} 1 -1 11.42 0.0 0.0 1.3149 0.0 0.0 737.3929465085494 0.0 737.3929465085494 0.0 2.378914519737004 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3149 + + 10 + 1 1.359 57200.9 1.0 6607 5399 12003 HBL1_DMSO_200M_050219_1,12008 HBL1_DMSO_200M_050219_1,12008,RRAGPALS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12009 61.723 43.0 1289700.0 25 0 194510.0 + -1 PSRKKYGMI 9 81 379.8731103052179 1136.5975015158538 3 379.8729736208916 MULTI CID FTMS 0 0 0 12003 568454.375 0.0767656832150617 5 -0.5294723510742188 6 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))PSRKKYGM(Oxidation (M))I_ REV__ENST00000398391.6_1_17:53084869-53084920:+|nuORF 13.042465956692816 0.4836390050082244 3 T{I|L}EPE{I|L} 6 -1 35.846 0.0 0.0 3.1538 0.0 0.0 436.2438506164856 0.0 436.2438506164856 0.0 20.361753205006607 0.0 0.0 0 0.3182503180159344 0.0 0.4247425010840047 0.0 T{I|L}EPE{I|L} 3.1538 - 153 1 1.359 54822.0 1.0 6608 5399 12003 HBL1_DMSO_200M_050219_1,12009 HBL1_DMSO_200M_050219_1,12009,PSRKKYGMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12010 61.724 49.0 847210.0 25 0 118760.0 + 9318 FIHQHFVEV 9 69 385.8695735924623 1154.5868913775869 3 385.8697997927666 MULTI CID FTMS 0 0 0 12003 462590.8125 0.2323792083540628 -1 0.0291175842285156 7 Unmodified _FIHQHFVEV_ ENSG00000114648|ENST00000232766|KLHL18;ENST00000461084.5_1_3:47324437-47378284:+|nuORF;nc|ENSG00000114648|O94889-2|KLHL18 20.41453444215458 0.284085796332423 3 [HQ]H{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}V{NN|[MP]|[D{I|L}]|[EV]} 9 4 + 22.342 0.0 0.0 1.935 1.935 66.745 0.0 0.0 0.0 0.7918124604762475 0.7918124604762475 0.7918124604762475 0.7918124604762475 0 0.0 0.0 0.0 0.0 [HQ]H{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}V{NN|[MP]|[D{I|L}]|[EV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HQH{M(Oxidation (M))|F}V{NN|[MP]|[D{I|L}]|[EV]};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}QH{M(Oxidation (M))|F}V{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]V{M(Oxidation (M))|F}{I|L}[MT][W{I|L}];[{M(Oxidation (M))|F}V]A[HA]H{M(Oxidation (M))|F}V{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}V{NN|[MP]|[D{I|L}]|[EV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[HA]H{M(Oxidation (M))|F}V{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]A[MT]{I|L}{M(Oxidation (M))|F}V{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]V{M(Oxidation (M))|F}{I|L}[MT]G{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H[AG]H{M(Oxidation (M))|F}V{NN|[MP]|[D{I|L}]|[EV]} 1.935;1.8665;1.8665;1.8511;1.8374;1.7661;1.7429;1.6849;1.5904;1.0689 -;+;-;-;-;-;-;-;-;- + 157 1 1.359 43013.0 1.0 6609 5399 12003 HBL1_DMSO_200M_050219_1,12010 HBL1_DMSO_200M_050219_1,12010,FIHQHFVEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12011 61.725 38.0 568450.0 25 0 70401.0 -1 VSLEELRV 8 59 493.7792900540562 985.5440271749123 2 493.7786132693291 MULTI CID FTMS 0 0 0 12003 472556.4375 0.1017367866963551 5 -0.5294723510742188 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VSLEELRV_ ENST00000552197.5_1_12:46598354-46599882:-|nuORF 2.577480529830294 0.808687252328423 3 V 1 -1 11.594 0.0 0.0 1.1764 0.0 0.0 868.4645040199305 0.0 868.4645040199305 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1764 + + 6 + 1 1.359 20379.7 1.0 6610 5399 12003 HBL1_DMSO_200M_050219_1,12011 HBL1_DMSO_200M_050219_1,12011,VSLEELRV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12012 61.732 369.0 460380.0 25 0 55077.0 36684 TCSPCEMCTV 10 188 537.1920513762099 1072.3695498192196 2 537.6937744021416 MULTI CID FTMS 0 0 0 12003 424795.0625 0.8776479824695629 -3 0.2687721252441406 9 Unmodified _TCSPCEMCTV_ ENSG00000104237|ENST00000220676|RP1 3.944395688203298 0.708391353636983 3 [C(Carbamidomethyl (C)){M(Oxidation (M))|F}][DG]G{M(Oxidation (M))|F}[SG]QV 10 8 [C(Carbamidomethyl (C)){M(Oxidation (M))|F}][DG]G{M(Oxidation (M))|F}[SG]Q + + 13.979 1.6555 0.1733 1.3036 1.3036 48.462 0.0 0.0 0.0 0.0 -2.033569664897712 -2.033569664897712 0.0 0 0.0 0.0 0.0 0.0 [C(Carbamidomethyl (C)){M(Oxidation (M))|F}][DG]G{M(Oxidation (M))|F}[SG]QV 1.3036 - 669 + 1 1.359 137879.1 1.0 6611 5399 12003 HBL1_DMSO_200M_050219_1,12012 HBL1_DMSO_200M_050219_1,12012,TCSPCEMCTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12013 61.735 138.0 494190.0 25 0 65985.0 + 39370 VAGYSLLT 8 109 412.2303899297853 822.4462269263706 2 412.2302734255791 MULTI CID FTMS 0 0 0 12003 391002.65625 0.1464834036555041 12 -1.1665763854980469 10 Unmodified _VAGYSLLT_ REV__ENSG00000180777|ENST00000690538|ANKRD30B;REV__nc|ENSG00000180777|Q9BXX2-2|ANKRD30B;REV__nc|ENSG00000180777|Q9BXX2|ANKRD30B 6.354104778181461 0.7857632046190106 3 [{I|L}P]A 3 -1 11.884 0.0 0.0 1.445 0.0 0.0 0.0 538.2494245184206 538.2494245184206 1.6066633020449077 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}P]A 1.445 - 38 1 1.359 57302.0 1.0 6612 5399 12003 HBL1_DMSO_200M_050219_1,12013 HBL1_DMSO_200M_050219_1,12013,VAGYSLLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12014 61.737 99.0 689250.0 25 0 48259.0 + 9319 FIHQHFVEV 9 93 578.3006612897576 1154.5867696463151 2 578.3013793826103 MULTI CID FTMS 0 0 0 12003 271967.1875 0.2179349117357284 -1 0.0291175842285156 11 Unmodified _FIHQHFVEV_ ENSG00000114648|ENST00000232766|KLHL18;ENST00000461084.5_1_3:47324437-47378284:+|nuORF;nc|ENSG00000114648|O94889-2|KLHL18 51.41523569358685 0.0372669606867193 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HGAH{M(Oxidation (M))|F}VEV 10 2 + 58.363 0.0 0.0 5.0549 5.0549 75.439 0.0 0.0 0.0 2.3459165064184617 16.53212513775344 2.3459165064184617 1.7609125905568137 0 1.168826521534556 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HGAH{M(Oxidation (M))|F}VEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GHAH{M(Oxidation (M))|F}VEV;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}GAH{M(Oxidation (M))|F}VEV;{[{M(Oxidation (M))|F}H]|[RQ]}VAAH{M(Oxidation (M))|F}VEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HQH{M(Oxidation (M))|F}VEV;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}QH{M(Oxidation (M))|F}VEV;[{M(Oxidation (M))|F}V]AHAH{M(Oxidation (M))|F}VEV;[{M(Oxidation (M))|F}V]HAAH{M(Oxidation (M))|F}VEV;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}GAHD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HGAHD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V 5.0549;4.9024;4.8517;4.6992;4.4891;4.286;4.286;4.286;3.4663;3.3668 -;-;-;-;+;-;-;-;-;- + 616 1 1.359 56463.3 1.0 6613 5399 12003 HBL1_DMSO_200M_050219_1,12014 HBL1_DMSO_200M_050219_1,12014,FIHQHFVEV True True FIHQHFVEV 61.736934 578.30137938261 22399910.5 12003.0 nc|ENSG00000114648|O94889-2|KLHL18;;ENSG00000114648|ENST00000232766|KLHL18;;ENST00000461084.5_1_3:47324437-47378284:+|nuORF 8.802662372589111 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12015 61.745 454.0 642060.0 25 0 40699.0 + 2975 AVIEHLERL 9 181 540.3134030180012 1078.6122531028022 2 540.8163329958916 MULTI CID FTMS 0 0 0 12003 236509.0 0.3292280860891723 -1 0.0291175842285156 12 Unmodified _AVIEHLERL_ ENSG00000257218|ENST00000551765|GATC 63.960520009940105 0.0238892913700936 3 {[VA]|[{I|L}G]}{I|L}EH{I|L}ER{I|L} 9 0 + 83.88 0.0 0.0 7.7766 7.7766 89.888 0.0 0.0 0.0 25.642492736872605 13.711071954785057 13.711071954785057 6.505149978319906 0 1.7346368802282015 2.0 0.3252574989159953 0.6861818737241735 + + {[VA]|[{I|L}G]}{I|L}EH{I|L}ER{I|L};{[VA]|[{I|L}G]}{I|L}E{I|L}HER{I|L};{[VA]|[{I|L}G]}{I|L}EH{I|L}[NG]KV;{[VA]|[{I|L}G]}{I|L}{I|L}EHER{I|L};{[VA]|[{I|L}G]}{I|L}EH{I|L}WV{I|L};{[VA]|[{I|L}G]}{I|L}EH{I|L}W{I|L}V;{[VA]|[{I|L}G]}{I|L}E{I|L}H[NG]KV;{[VA]|[{I|L}G]}{I|L}E{I|L}HWV{I|L};{[VA]|[{I|L}G]}{I|L}E{I|L}HW{I|L}V;{[VA]|[{I|L}G]}{I|L}{I|L}EHWV{I|L} 7.7766;7.1735;6.5054;6.357;6.3569;6.3569;5.9023;5.7538;5.7538;5.2205 +;-;-;-;-;-;-;-;-;- + 4215 + 1 1.359 224407.3 1.0 6614 5399 12003 HBL1_DMSO_200M_050219_1,12015 HBL1_DMSO_200M_050219_1,12015,AVIEHLERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12016 61.753 457.0 456280.0 25 0 33630.0 + + 11462 AVFTDKDANVRL 12 128 674.8650962852589 0 674.8651611208916 PEAK CID FTMS 0 0 0 12003 208244.796875 0.3588646357206757 -1 0.0291175842285156 13 Unmodified _GIFTYRGWLHV_ ENST00000429235.1_1_9:103108567-103109562:-|nuORF;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 39.94969957227396 0.1297000872811274 3 G{M(Oxidation (M))|F}TDKDK 7 -1 75.61 0.0 0.0 5.6102 0.0 0.0 113.08506612315324 440.2354830377563 553.3205491609095 0.0 0.0 0.0 0.0 0 2.048455006504028 0.0 1.1861818737241734 0.7302046884880937 G{M(Oxidation (M))|F}TDKDK 5.6102 - 2424 + 1 1.359 151760.8 1.0 6615 5399 12003 HBL1_DMSO_200M_050219_1,12016 HBL1_DMSO_200M_050219_1,12016,GIFTYRGWLHV False False AVFTDKDANVRL 61.753117 674.865161120892 3634490.25 12003.0 ENST00000429235.1_1_9:103108567-103109562:-|nuORF;;ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 8.095521926879883 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12017 61.762 476.0 371430.0 25 0 18241.0 + -1 YTVPPQMCL 9 212 534.2493827284226 1066.484212523645 2 534.2493774294853 MULTI CID FTMS 0 0 0 12003 210107.671875 0.6229580550838922 -1 0.0291175842285156 14 Oxidation (M) _YTVPPQM(Oxidation (M))CL_ REV__LTR2_dup419|chr9:62800851-62801305:+|1.9228373940033752|0.4981646979306208|1.95|48.0|3|1|sense 15.847184025352805 0.4077185912009129 3 [YT]P 3 -1 31.695 0.0 0.0 2.9719 0.0 0.0 0.0 702.2959262486088 702.2959262486088 -1.3359377811719495 0.0 -1.3359377811719495 0.0 0 0.4247425010840047 2.0 0.0 0.0 [YT]P 2.9719 - 1145 + 1 1.359 143478.1 1.0 6616 5399 12003 HBL1_DMSO_200M_050219_1,12017 HBL1_DMSO_200M_050219_1,12017,YTVPPQMCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12018 61.763 59.0 706910.0 25 0 97049.0 36714 TDKTSTTGSI 10 73 505.7524217155815 1009.490290497963 2 505.7540771365166 MULTI CID FTMS 0 0 0 12003 212019.28125 0.3699647867432034 -1 0.0291175842285156 15 Unmodified _TDKTSTTGSI_ ENSG00000101040|ENST00000471951|ZMYND8;ENST00000468376.2_1_20:45867286-45947776:-|nuORF;nc|ENSG00000101040|Q9ULU4-10|ZMYND8;nc|ENSG00000101040|Q9ULU4-11|ZMYND8;nc|ENSG00000101040|Q9ULU4-12|ZMYND8;nc|ENSG00000101040|Q9ULU4-13|ZMYND8;nc|ENSG00000101040|Q9ULU4-14|ZMYND8;nc|ENSG00000101040|Q9ULU4-16|ZMYND8;nc|ENSG00000101040|Q9ULU4-17|ZMYND8;nc|ENSG00000101040|Q9ULU4-19|ZMYND8;nc|ENSG00000101040|Q9ULU4-20|ZMYND8;nc|ENSG00000101040|Q9ULU4-21|ZMYND8;nc|ENSG00000101040|Q9ULU4-22|ZMYND8;nc|ENSG00000101040|Q9ULU4-23|ZMYND8;nc|ENSG00000101040|Q9ULU4-3|ZMYND8;nc|ENSG00000101040|Q9ULU4-4|ZMYND8;nc|ENSG00000101040|Q9ULU4-5|ZMYND8;nc|ENSG00000101040|Q9ULU4-6|ZMYND8;nc|ENSG00000101040|Q9ULU4-8|ZMYND8;nc|ENSG00000101040|Q9ULU4-9|ZMYND8;nc|ENSG00000101040|Q9ULU4|ZMYND8 13.90604991867851 0.6142120002215601 3 S{I|L} 2 8 21.498 0.0 0.0 2.1296 0.0 0.0 791.3630607389771 0.0 791.3630607389771 0.0 10.784634594678266 0.0 0.0 0 0.3807196863200844 0.0 0.2742275032520141 0.0 + S{I|L} 2.1296 + + 59 + 1 1.359 37651.6 1.0 6617 5399 12003 HBL1_DMSO_200M_050219_1,12018 HBL1_DMSO_200M_050219_1,12018,TDKTSTTGSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12019 61.772 508.0 284610.0 25 0 23211.0 -1 QCTFEGCPRTY 11 128 709.7926833553425 1417.570813777485 2 710.2961303591728 MULTI CID FTMS 0 0 0 12003 131907.671875 0.1555471090401855 -3 0.2687721252441406 16 2 Carbamidomethyl (C) _QC(Carbamidomethyl (C))TFEGC(Carbamidomethyl (C))PRTY_ ENSG00000188786|ENST00000373036|MTF1 12.872603262515298 0.7673816944342327 3 {[TV]|[{I|L}S]}T{I|L} 4 -1 24.614 0.0 0.0 1.7364 0.0 0.0 0.0 1000.3028748949256 1000.3028748949256 8.887437564371016 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.8494850021680094 0.0 {[TV]|[{I|L}S]}T{I|L} 1.7364 - 983 1 1.359 103034.9 1.0 6618 5399 12003 HBL1_DMSO_200M_050219_1,12019 HBL1_DMSO_200M_050219_1,12019,QCTFEGCPRTY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12020 61.775 53.0 344740.0 25 0 28886.0 + + 25685 SYLATLTEK 9 49 513.2474326988888 1024.4803124645775 2 513.7143432497978 MULTI CID FTMS 0 0 0 12003 64521.19140625 0.929251919975111 2 -0.2541694641113281 17 Unmodified _NHERFSVH_ ENSG00000168411|ENST00000361070|RFWD3 2.889219685676258 0.8067950007271085 3 {[{M(Oxidation (M))|F}C]|[YS]}{I|L} 3 -1 8.9524 0.0 0.0 0.87385 0.0 0.0 0.0 658.3421724908811 658.3421724908811 -1.5051499783199065 0.0 -1.5051499783199065 0.0 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}C]|[YS]}{I|L} 0.87385 - 11 + 1 1.359 21236.4 1.0 6619 5399 12003 HBL1_DMSO_200M_050219_1,12020 HBL1_DMSO_200M_050219_1,12020,NHERFSVH False False SYLATLTEK 61.774534 513.714343249798 4068645.0 12003.0 ENSG00000168411|ENST00000361070|RFWD3 0.9732842048009236 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12021 61.786 662.0 491180.0 25 0 26466.0 35892 SVLVSCCSSL 10 247 499.237677738493 996.460802543786 2 499.2375976443291 MULTI CID FTMS 0 0 0 12003 100933.828125 0.1250333498914996 -6 0.4814262390136719 18 Unmodified _SVLVSCCSSL_ ENSG00000119285|ENST00000366582|HEATR1 14.838274106304384 0.5985701837916485 3 [VS]{I|L}[RK]{I|L}{I|L} 7 6 23.156 0.0 0.0 2.3238 0.0 0.0 0.0 183.88454456942972 183.88454456942972 3.925881227716715 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5866968715561641 0.0 [VS]{I|L}[RK]{I|L}{I|L} 2.3238 - 1043 1 1.359 238912.2 1.0 6620 5399 12003 HBL1_DMSO_200M_050219_1,12021 HBL1_DMSO_200M_050219_1,12021,SVLVSCCSSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12022 61.8 800.0 43433.0 25 0 11378.0 -1 0 30 1148.466536923622 3442.3777813710662 3 1149.132861316204 MULTI CID FTMS 0 0 0 12003 92875.21875 1.0 0 0.0 19 3 G 1 -1 4.6041 0.0 0.0 0.13375 0.0 0.0 2293.7944816657914 1088.5163057916627 3382.3107874574544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.13375 - 1 + 1 1.359 38352.5 0.8600000143051147 6621 5399 12003 HBL1_DMSO_200M_050219_1,12022 HBL1_DMSO_200M_050219_1,12022, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12024 61.805 64.0 1420900.0 25 0 140420.0 + 5920 DPYSRISQEDG 11 95 633.7835926832987 1265.552632433397 2 633.7841674685478 MULTI CID FTMS 0 0 0 12023 1875282.875 1.0 0 0.0 1 Unmodified _DPYSRISQEDG_ ENSG00000092148|ENST00000399332|HECTD1 21.59015148037692 0.5852593066373742 3 DPYGNR[{I|L}P][MT]C 11 7 + 85.363 0.0 0.0 6.7451 6.7451 87.412 0.0 0.0 0.0 57.37997922551455 0.0088261288166791 0.0088261288166791 6.673464722909799 0 2.1989700043360187 1.6989700043360187 0.0 0.7302046884880937 DPYGNR[{I|L}P][MT]C;DPYGNR[DP][W{M(Oxidation (M))|F}];DPYGGGR[DP][W{M(Oxidation (M))|F}];DPYGN[QT][RN]VC;DPYG[{M(Oxidation (M))|F}V]P[RN]VC;DPYSC{I|L}P[RN]VC;DPYG[{M(Oxidation (M))|F}V]VH[W{M(Oxidation (M))|F}];DPY{I|L}[CS]P[RN]VC;DPYSC{I|L}VH[W{M(Oxidation (M))|F}];DPY{I|L}VD[DP][W{M(Oxidation (M))|F}] 6.7451;6.2178;5.4936;5.3901;4.8167;4.6205;4.4173;4.3454;4.2212;4.1773 -;-;-;-;-;-;-;-;-;- 573 + 1 1.364 75008.1 1.0 6622 5400 12023 HBL1_DMSO_200M_050219_1,12024 HBL1_DMSO_200M_050219_1,12024,DPYSRISQEDG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12025 61.819 800.0 183160.0 25 0 9615.6 + + -1 GQVQVIPQGHL 11 213 587.8298638732172 1173.6451748132342 2 588.8328735232353 MULTI CID FTMS 0 0 0 12023 57817.43359375 0.6489188619004546 1 -0.1662712097167968 2 Carbamidomethyl (C) _LVISTQLAGC(Carbamidomethyl (C))L_ nc|ENSG00000172530|Q8N9N5-2|BANP;nc|ENSG00000172530|Q8N9N5-7|BANP;nc|ENSG00000172530|Q8N9N5-4|BANP;ENSG00000172530|ENST00000682872|BANP;nc|ENSG00000172530|Q8N9N5-5|BANP 10.823927491677226 0.8099964156050846 3 EPAKT{M(Oxidation (M))|F} 6 -1 26.744 0.0 0.0 2.2787 0.0 0.0 0.0 497.2848909967407 497.2848909967407 5.841093793419464 0.0 0.0 0.0 0 0.064909327626439 0.3979400086720376 0.0 0.0 EPAKT{M(Oxidation (M))|F} 2.2787 - 2626 + 1 1.364 115214.2 0.8299999833106995 6623 5400 12023 HBL1_DMSO_200M_050219_1,12025 HBL1_DMSO_200M_050219_1,12025,LVISTQLAGCL False False GQVQVIPQGHL 61.818861 588.3319 2051170.125 12023.0 nc|ENSG00000172530|Q8N9N5-2|BANP;;nc|ENSG00000172530|Q8N9N5-7|BANP;;nc|ENSG00000172530|Q8N9N5-4|BANP;;ENSG00000172530|ENST00000682872|BANP;;nc|ENSG00000172530|Q8N9N5-5|BANP 4.213681538899739 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12026 61.82 46.0 3292800.0 25 0 505910.0 + 19598 LGADATMSDSE 11 130 548.7261718956482 1095.4377908580964 2 548.7275268435478 MULTI CID FTMS 0 0 0 12023 2075609.625 0.133768357214767 -1 0.0878982543945312 3 Unmodified _LGADATMSDSE_ REV__ENSG00000105072|ENST00000221671|C19orf44;REV__nc|nan|Q9H6X5-2|C19orf44 27.628801355627647 0.4434699450731472 3 {[QG]|[NA]}{I|L}ETM 6 -1 61.252 0.0 0.0 5.5916 0.0 0.0 0.0 433.12129850874015 433.12129850874015 26.81540340012745 0.0 0.0 0.0 0 1.3494850021680094 2.0 1.424742501084005 0.4916440611282625 {[QG]|[NA]}{I|L}ETM 5.5916 - 603 1 1.364 121023.6 1.0 6624 5400 12023 HBL1_DMSO_200M_050219_1,12026 HBL1_DMSO_200M_050219_1,12026,LGADATMSDSE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12027 61.822 55.0 1747300.0 25 0 237300.0 + 37939 TMAKESSIIGV 11 119 568.305117647299 1134.5956823613978 2 568.3051025271416 MULTI CID FTMS 0 0 0 12023 1398315.625 0.6752120093972352 -1 0.0878982543945312 4 Unmodified _TMAKESSIIGV_ ENSG00000116791|ENST00000340866|CRYZ;nc|ENSG00000116791|Q08257-2|CRYZ;nc|ENSG00000116791|Q08257-3|CRYZ 46.0223103267499 0.1396584557920269 3 [MT]RRCS{I|L}{I|L}[VG] 10 4 + 56.577 0.0 0.0 4.9865 4.9865 75.368 0.0 0.0 0.0 1.8040092401238887 1.8040092401238887 1.8040092401238887 1.8040092401238887 0 1.305462187404089 1.5228787452803376 1.066901560044258 0.0 [MT]RRCS{I|L}{I|L}[VG];[TP]{[MS]|[{M(Oxidation (M))|F}A]}KCS{I|L}{I|L}R;[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ESS{I|L}{I|L}R;[MT]RRA[MT]{I|L}[VG];[MT]RRE{[CA]|SS}{I|L}R;[MT][KA]ESS{I|L}{I|L}[VG];[TP]{[MS]|[{M(Oxidation (M))|F}A]}KA[MT]{I|L}R;{[QV]|[N{I|L}]|[RA]|[KV]}[WM]CS{I|L}{I|L}R;{[QN]|[E{I|L}]|[KN]}{[CA]|SS}KCS{I|L}{I|L}R;[MT][KA]E{I|L}{[CA]|SS}{I|L}R 4.9865;4.8275;4.7325;4.3952;4.3406;4.2603;4.2362;3.9427;3.836;3.6105 -;-;-;-;-;+;-;-;-;- + 1003 1 1.364 78988.5 1.0 6625 5400 12023 HBL1_DMSO_200M_050219_1,12027 HBL1_DMSO_200M_050219_1,12027,TMAKESSIIGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12028 61.83 482.0 551910.0 25 0 47006.0 23577 LTNEETTDST 10 201 555.7433859513766 1109.472218969553 2 555.7446166872978 MULTI CID FTMS 0 0 0 12023 464110.34375 0.2828549267220337 -1 0.0878982543945312 5 Unmodified _LTNEETTDST_ ENSG00000111802|ENST00000378198|TDP2;ENST00000478285.1_1_6:24654627-24658985:-|nuORF;nc|ENSG00000111802|O95551-2|TDP2 39.94969957227396 0.1580982266129622 3 [VP]DEQ{I|L}S[YC(Carbamidomethyl (C))] 9 9 + 41.829 0.0 0.0 3.7702 3.7702 69.068 0.0 0.0 0.0 0.345271891930615 2.6658935096007426 0.345271891930615 0.345271891930615 0 0.0 0.7695510786217261 1.4802046884880935 0.0 [VP]DEQ{I|L}S[YC(Carbamidomethyl (C))];[Y{I|L}]YE{I|L}S[YC(Carbamidomethyl (C))];[VP]DQE{I|L}S[YC(Carbamidomethyl (C))];[VP]NEE{I|L}S[YC(Carbamidomethyl (C))];[{I|L}P]DDQ{I|L}S[YC(Carbamidomethyl (C))];[VP]DE[AG]{I|L}S[YC(Carbamidomethyl (C))];[VP]EDQ{I|L}S[YC(Carbamidomethyl (C))];[{I|L}P]DNE{I|L}S[YC(Carbamidomethyl (C))];[VP]ENE{I|L}S[YC(Carbamidomethyl (C))];[VP]DEQS{I|L}[YC(Carbamidomethyl (C))] 3.7702;3.7391;3.6115;3.3401;3.0329;2.9402;2.9125;2.8742;2.7538;2.5757 -;-;-;-;-;-;-;-;-;- 5330 1 1.364 207306.1 1.0 6626 5400 12023 HBL1_DMSO_200M_050219_1,12028 HBL1_DMSO_200M_050219_1,12028,LTNEETTDST False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12029 61.839 519.0 372010.0 25 0 39652.0 -1 0 179 610.6232428432052 1828.8478991298152 3 610.6234008669853 MULTI CID FTMS 0 0 0 12023 435461.125 1.0 0 0.0 6 3 {[SA]|[TG]}YQVDK[HQ]Q[RH]W{M(Oxidation (M))|F} 14 -1 + 71.591 0.0 0.0 3.9145 3.9145 75.874 0.0 0.0 0.0 7.623569832004122 13.345299569725924 7.623569832004122 4.3613664413781805 0 0.805462187404089 1.154901959985743 1.1549471895720984 1.0629529932484498 {[SA]|[TG]}YQVDK[HQ]Q[RH]W{M(Oxidation (M))|F};{[SA]|[TG]}YQVDKN[YQ]A[{I|L}P]W{M(Oxidation (M))|F};{[SA]|[TG]}YAGVDK[HQ]Q[RH]W{M(Oxidation (M))|F};[YG]TQVDK[HQ]Q[RH]W{M(Oxidation (M))|F};[YQ]GTVDK[HQ]Q[RH]W{M(Oxidation (M))|F};{[SA]|[TG]}YAGVDKN[YQ]A[{I|L}P]W{M(Oxidation (M))|F};[YQ]TGVDK[HQ]Q[RH]W{M(Oxidation (M))|F};[YG]AGTVDK[HQ]Q[RH]W{M(Oxidation (M))|F};[YG]ATGVDK[HQ]Q[RH]W{M(Oxidation (M))|F};[YG]TQVDKN[YQ]A[{I|L}P]W{M(Oxidation (M))|F} 3.9145;3.6761;3.6604;3.4977;3.4287;3.423;3.3921;3.3911;3.3545;3.2592 -;-;-;-;-;-;-;-;-;- 87080 1 1.364 152621.2 1.0 6627 5400 12023 HBL1_DMSO_200M_050219_1,12029 HBL1_DMSO_200M_050219_1,12029, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12030 61.843 172.0 498920.0 25 0 29649.0 + -1 DPTMWLPMML 10 126 422.85786832432825 1265.5517755731848 3 422.8581115603447 MULTI CID FTMS 0 0 0 12023 426846.9375 1.0 0 0.0 7 2 Oxidation (M) _DPTM(Oxidation (M))WLPM(Oxidation (M))ML_ REV__ENSG00000186854|ENST00000409520|TRABD2A;REV__nc|ENSG00000186854|Q86V40-2|TRABD2A 8.97624648632007 0.6851160995914376 3 [DP]Y[CS]TMTVH{I|L} 11 -1 + 55.883 0.0 0.0 4.4157 4.4157 76.971 0.0 0.0 0.0 37.210635766988986 13.65827074137752 13.65827074137752 3.99166239860314 0 0.2742275032520141 1.6989700043360187 0.2742275032520141 0.0 [DP]Y[CS]TMTVH{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PYATMTVH{I|L};[DP]Y[CS][W{M(Oxidation (M))|F}]VH{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PYA[W{M(Oxidation (M))|F}]VH{I|L};[DP]Y[CS]TMT[H{I|L}]V;[DP]KKMT[CS]Y{[HG]|PP};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PYATMT[H{I|L}]V;[DP]Y[CS]{I|L}PQQC{I|L};[DP]Y[CS]{I|L}PG[C(Carbamidomethyl (C))R]V;[DP]Y{I|L}[CS]PQQC{I|L} 4.4157;4.1003;3.1897;2.8743;2.7675;2.5559;2.4521;2.2452;2.1376;2.0704 -;-;-;-;-;-;-;-;-;- 934 + 1 1.364 75639.0 1.0 6628 5400 12023 HBL1_DMSO_200M_050219_1,12030 HBL1_DMSO_200M_050219_1,12030,DPTMWLPMML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12031 61.853 622.0 685460.0 25 0 36666.0 + 24237 MAPKAWTV 8 268 452.24099215740273 902.4674313816056 2 452.2415954470634 MULTI CID FTMS 0 0 0 12023 353429.21875 0.5590827367914226 -1 0.0878982543945312 8 Unmodified _MAPKAWTV_ ENSG00000138801|ENST00000265174|PAPSS1 32.30548876998284 0.3644845974844379 3 MAP 3 5 41.25 0.0 0.0 4.5708 0.0 0.0 0.0 600.3157442682249 600.3157442682249 14.589002467542912 0.0 0.0 0.0 0 0.3713630618349285 2.0 0.0 0.0 + MAP 4.5708 + + 1311 + 1 1.364 319755.3 1.0 6629 5400 12023 HBL1_DMSO_200M_050219_1,12031 HBL1_DMSO_200M_050219_1,12031,MAPKAWTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12032 61.865 672.0 438630.0 25 0 66238.0 -1 0 216 408.249183408684 407.241906942084 1 408.2489196658134 MULTI CID FTMS 0 0 0 -1 0 9 3 {I|L}Y{I|L} 3 -1 + 47.84 0.0 0.0 11.747 11.747 92.837 0.0 0.0 0.0 32.91808923764867 10.457574905606748 10.457574905606748 6.919380037717801 0 0.4194451763165202 2.0 0.0 0.0 {I|L}Y{I|L};Y{I|L}{I|L};[Y{I|L}]{I|L} 11.747;10.048;9.4049 -;-;- 43 + 1 1.364 226187.8 1.0 6630 5400 12023 HBL1_DMSO_200M_050219_1,12032 HBL1_DMSO_200M_050219_1,12032, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12033 61.877 637.0 443520.0 25 0 30286.0 + 2894 GLYIVRGDNV 10 244 553.3045229829027 1104.5944930326052 2 553.3032104372978 MULTI CID FTMS 0 0 0 12023 275624.875 0.969395659567434 -1 0.0878982543945312 10 Unmodified _AVFNQVAFPL_ ENSG00000128534|ENST00000249299|LSM8 32.30548876998284 0.2428506522065767 3 {[VA]|[{I|L}G]}Y{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PP{I|L} 10 5 + 51.48 0.0 0.0 4.6606 4.6606 78.301 0.0 0.0 0.0 30.14497986744422 7.2004668748194405 7.2004668748194405 4.503187623076968 0 0.9308845489566888 1.6989700043360187 0.2742275032520141 0.0 {[VA]|[{I|L}G]}Y{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PP{I|L};{[VA]|[{I|L}G]}Y{I|L}[W{M(Oxidation (M))|F}]PP{I|L};{[VA]|[{I|L}G]}Y{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}P;{[VA]|[{I|L}G]}YV{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PP{I|L};{[VA]|[{I|L}G]}Y{I|L}V[WQ]QV;{[VA]|[{I|L}G]}Y{I|L}[W{M(Oxidation (M))|F}]P{I|L}P;{[VA]|[{I|L}G]}Y{I|L}V[WQ]N{I|L};{[VA]|[{I|L}G]}Y{I|L}V[EP]VC{I|L};{[VA]|[{I|L}G]}Y{I|L}V[EP]{M(Oxidation (M))|F}AP;{[VA]|[{I|L}G]}Y{I|L}{[CA]|SS}[KQ]P{I|L} 4.6606;4.2529;3.852;3.507;3.4723;3.4443;3.3934;3.1798;2.9271;2.8499 -;-;-;-;-;-;-;-;-;- 8164 + 1 1.364 212606.8 1.0 6631 5400 12023 HBL1_DMSO_200M_050219_1,12033 HBL1_DMSO_200M_050219_1,12033,AVFNQVAFPL False False GLYIVRGDNV 61.877387 553.303210437298 2580259.25 12023.0 ENSG00000128534|ENST00000249299|LSM8 2.962040503819784 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12034 61.89 716.0 295460.0 25 0 16572.0 -1 RKSFSCKYCDK 11 159 739.8500494386478 1477.6855459440956 2 739.8513061404228 MULTI CID FTMS 0 0 0 12023 272331.3125 1.0 0 0.0 11 2 Carbamidomethyl (C) _RKSFSC(Carbamidomethyl (C))KYC(Carbamidomethyl (C))DK_ ENSG00000019549|ENST00000020945|SNAI2 10.315234532428624 0.8205777915985574 3 {M(Oxidation (M))|F}AT{I|L}SE{I|L}HC(Carbamidomethyl (C))DK 11 -1 117.72 0.0 0.0 7.9665 0.0 0.0 158.07503260297773 0.0 158.07503260297773 0.0 60.20841913299227 0.0 0.0 0 2.3169015600442577 0.0 3.084121882396211 0.5731074559755159 {M(Oxidation (M))|F}AT{I|L}SE{I|L}HC(Carbamidomethyl (C))DK 7.9665 - 57017 + 1 1.364 156606.7 1.0 6632 5400 12023 HBL1_DMSO_200M_050219_1,12034 HBL1_DMSO_200M_050219_1,12034,RKSFSCKYCDK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12035 61.893 165.0 314000.0 25 0 32900.0 13478 HLVAVEMVKL 10 83 380.2276576915663 0 380.2276183962822 PEAK CID FTMS 0 0 0 12023 277755.03125 1.0 0 0.0 12 Unmodified _HLVAVEMVKL_ ENST00000605952.5_2_7:150710035-150710410:-|nuORF 3.944395688203298 0.3961065659209837 3 T 1 10 2.7642 0.0 0.0 0.36446 0.0 0.0 572.3037823247357 82.0669191949828 654.3707015197185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.36446 - 1 + 1 1.364 47312.4 1.0 6633 5400 12023 HBL1_DMSO_200M_050219_1,12035 HBL1_DMSO_200M_050219_1,12035,HLVAVEMVKL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12036 61.896 155.0 475290.0 25 0 87069.0 8778 EVTPPTLV 8 71 428.24314622881263 854.4717395244253 2 428.2416869997978 MULTI CID FTMS 0 0 0 12023 248186.75 0.1630084011770793 8 -0.8343048095703125 13 Unmodified _EVTPPTLV_ ENSG00000134440|ENST00000256854|NARS1 5.230669730166228 0.792582437072536 3 V 1 7 12.764 0.0 0.0 1.4938 0.0 0.0 737.3923002927831 0.0 737.3923002927831 0.0 2.7205617892644014 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.4938 + + 8 + 1 1.364 64208.8 1.0 6634 5400 12023 HBL1_DMSO_200M_050219_1,12036 HBL1_DMSO_200M_050219_1,12036,EVTPPTLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12037 61.911 800.0 147390.0 25 0 11846.0 11251 GESGSPFLGP 10 117 947.4504280159244 946.4431515493244 1 949.4586059451104 MULTI CID FTMS 0 0 0 12023 216752.78125 1.0 0 0.0 14 Unmodified _GESGSPFLGP_ ENSG00000107263|ENST00000683357|RAPGEF1;nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1 24.020572477871973 0.4289996903560794 3 [H{I|L}]{[HG]|PP}D{[QS]|[NT]}GP 9 7 + 46.431 0.0 0.0 4.9058 4.9058 76.992 0.0 0.0 0.0 4.025042451864209 14.973024840566469 4.025042451864209 3.0102999566398125 0 0.0 1.6989700043360187 0.6307196863200843 0.0 [H{I|L}]{[HG]|PP}D{[QS]|[NT]}GP;[H{I|L}]{[HG]|PP}D{[SA]|[TG]}GGP;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}EEAA{I|L}GP;[H{I|L}]HG{[WS]|[C(Carbamidomethyl (C)){I|L}]}GGP;[H{I|L}]HG{[CA]|SS}VGGP;[VG]{[CA]|SS}D{I|L}C{I|L}GP;[H{I|L}]{[HG]|PP}D{[SA]|[TG]}NP;{[QS]|[NT]}D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}GP;[VG]{[CA]|SS}{I|L}DC{I|L}GP;[H{I|L}]HG{[WS]|[C(Carbamidomethyl (C)){I|L}]}NP 4.9058;4.5877;4.4805;4.3133;3.9032;3.5615;3.4953;3.269;3.2434;3.2266 -;-;-;-;-;-;-;-;-;- 1729 1 1.364 77684.6 0.8600000143051147 6635 5400 12023 HBL1_DMSO_200M_050219_1,12037 HBL1_DMSO_200M_050219_1,12037,GESGSPFLGP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12038 61.925 780.0 366610.0 25 0 25413.0 + 36681 TCPPPQLAV 9 226 463.2435357246076 924.4725185160152 2 463.2437316775322 MULTI CID FTMS 0 0 0 12023 213377.78125 0.7891650712325459 -1 0.0878982543945312 15 Unmodified _TCPPPQLAV_ ENSG00000187912|ENST00000417570|CLEC17A;nc|ENSG00000187912|Q6ZS10-2|CLEC17A;nc|ENSG00000187912|Q6ZS10-3|CLEC17A 43.85829265575387 0.0542763391141878 3 {[CT]|[{M(Oxidation (M))|F}G]}P 3 6 31.254 0.0 0.0 3.3808 0.0 0.0 0.0 620.3420388179383 620.3420388179383 -4.386700476962062 0.0 -4.386700476962062 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {[CT]|[{M(Oxidation (M))|F}G]}P 3.3808 + + 742 + 1 1.364 216291.6 1.0 6636 5400 12023 HBL1_DMSO_200M_050219_1,12038 HBL1_DMSO_200M_050219_1,12038,TCPPPQLAV True True TCPPPQLAV 61.924635 463.243731677532 2472972.25 12023.0 ENSG00000187912|ENST00000417570|CLEC17A;;nc|ENSG00000187912|Q6ZS10-2|CLEC17A;;nc|ENSG00000187912|Q6ZS10-3|CLEC17A 5.647332827250163 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12039 61.938 800.0 163580.0 25 0 39759.0 -1 0 62 1160.4931931735164 3478.4577501207496 3 1160.830371081829 MULTI CID FTMS 0 0 0 12023 179242.359375 1.0 0 0.0 16 3 E 1 -1 6.9897 0.0 0.0 0.20094 0.0 0.0 2822.22988858178 524.1624849908811 3346.392373572661 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20094 - 8 + 1 1.364 109425.9 0.7900000214576721 6637 5400 12023 HBL1_DMSO_200M_050219_1,12039 HBL1_DMSO_200M_050219_1,12039, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12040 61.953 741.0 172830.0 25 0 11939.0 + 30302 QYTCVYFYP 9 183 592.2588378787041 0 592.2588378787041 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _QYTCVYFYP_ REV__ENSG00000159147|ENST00000303071|DONSON 16.942295170755138 0.2326366549411506 3 T 1 -1 5.0353 0.0 0.0 0.42582 0.0 0.0 790.3350474591813 288.09919153385005 1078.4342389930314 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 T 0.42582 + + 79 + 1 1.364 95927.2 1.0 6638 5400 12023 HBL1_DMSO_200M_050219_1,12040 HBL1_DMSO_200M_050219_1,12040,QYTCVYFYP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12041 61.966 800.0 417440.0 25 0 59241.0 + 36704 SQFPTPEAV 9 115 976.4738405231294 975.4665640565294 1 976.4727661013604 MULTI CID FTMS 0 0 0 12023 200278.75 0.0117577976030569 -10 0.8261299133300781 18 Unmodified _TDEYRPPV_ ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 21.74664581756881 0.5868176546531598 3 {[QN]|[E{I|L}]|[KN]}ATM{[ES]|[DT]|[{I|L}C]}PV 9 7 + 36.344 0.0 0.0 3.7259 3.7259 68.415 0.0 0.0 0.0 0.0034068823872317 0.5816852283144556 0.0034068823872317 0.0034068823872317 0 0.2742275032520141 1.0969100130080565 1.555462187404089 0.0 {[QN]|[E{I|L}]|[KN]}ATM{[ES]|[DT]|[{I|L}C]}PV;[EP]AVM{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PV;[NP]N{I|L}{I|L}GS{[{M(Oxidation (M))|F}D]|MM};{[QN]|[E{I|L}]|[KN]}ATC{M(Oxidation (M))|F}PPV;[NP]N{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}R;[TP]AA{M(Oxidation (M))|F}HHPV;{[QN]|[E{I|L}]|[KN]}ATMQNAV;[TP][RD][YE]PV;[NP]N{I|L}T[{M(Oxidation (M))|F}T]AV;[EP][YR]{[ES]|[DT]|[{I|L}C]}PV 3.7259;3.7255;3.6554;3.624;2.9249;2.9132;2.8979;2.869;2.867;2.8559 -;-;-;-;-;-;-;-;-;- 3906 1 1.364 213605.5 0.7799999713897705 6639 5400 12023 HBL1_DMSO_200M_050219_1,12041 HBL1_DMSO_200M_050219_1,12041,TDEYRPPV False False SQFPTPEAV 61.966385 976.47276610136 20672974.0 12023.0 ENSG00000109111|ENST00000314616|SUPT6H;;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 2.1207262674967446 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12043 61.971 10.0 2745000.0 25 0 289430.0 + 2310 AQIGSYVHV 9 64 487.2589136786344 972.5032744240688 2 487.2594482302666 MULTI CID FTMS 0 0 0 12042 2149013.75 0.0629181586089583 3 -0.2753028869628906 1 Unmodified _AQIGSYVHV_ ENSG00000166847|ENST00000300087|DCTN5;ENST00000566053.5_1_16:23652819-23678462:+|nuORF;nc|ENSG00000166847|Q9BTE1-2|DCTN5 12.531546534597751 0.4974689918368763 3 {[DA]|[EG]}{I|L} 3 7 17.192 0.0 0.0 1.7678 0.0 0.0 0.0 670.3318931586969 670.3318931586969 3.5024801833416337 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[DA]|[EG]}{I|L} 1.7678 - 32 1 1.372 32367.4 1.0 6640 5401 12042 HBL1_DMSO_200M_050219_1,12043 HBL1_DMSO_200M_050219_1,12043,AQIGSYVHV False True AQIGSYVHV 61.970641 487.259448230267 733922368.0 12042.0 nc|ENSG00000166847|Q9BTE1-2|DCTN5;;ENSG00000166847|ENST00000300087|DCTN5;;ENST00000566053.5_1_16:23652819-23678462:+|nuORF 7.391324202219645 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12044 61.972 4.5 9247500.0 25 0 970380.0 + 45767 YYITNDTVQTY 11 65 690.8192090097036 1379.6238650862072 2 690.8203613162041 MULTI CID FTMS 0 0 0 12042 11826683.0 1.0 0 0.0 2 Unmodified _YYITNDTVQTY_ ENSG00000144028|ENST00000323853|SNRNP200 41.8396318013385 0.1840573104808743 3 YYSVY 5 7 31.171 0.0 0.0 2.2594 0.0 0.0 0.0 701.3143307446634 701.3143307446634 5.88090859114196 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 YYSVY 2.2594 - 386 1 1.372 33758.3 1.0 6641 5401 12042 HBL1_DMSO_200M_050219_1,12044 HBL1_DMSO_200M_050219_1,12044,YYITNDTVQTY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12045 61.973 6.0 6883400.0 25 0 1623400.0 + 12734 GVMSVMPLVSA 11 62 545.78497310662 1089.55539328004 2 545.7855712771416 MULTI CID FTMS 0 0 0 12042 10206474.0 1.0 0 0.0 3 Unmodified _GVMSVMPLVSA_ REV__ENSG00000158806|ENST00000518119|NPM2;REV__nc|ENSG00000158806|Q86SE8-2|NPM2 41.8396318013385 0.1840573104808743 3 D{I|L}VSA 5 -1 46.95 0.0 0.0 4.3091 0.0 0.0 586.2982925337988 0.0 586.2982925337988 0.0 30.127881306118454 0.0 0.0 0 1.242992819099939 0.0 1.2302046884880935 0.0 D{I|L}VSA 4.3091 - 146 1 1.372 38658.0 1.0 6642 5401 12042 HBL1_DMSO_200M_050219_1,12045 HBL1_DMSO_200M_050219_1,12045,GVMSVMPLVSA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12046 61.974 6.0 9452500.0 25 0 1854700.0 26924 PDSFNIPGSS 10 81 510.73519197882905 1019.455831024458 2 510.7356140017509 MULTI CID FTMS 0 0 0 12042 8683236.0 1.0 0 0.0 4 Unmodified _PDSFNIPGSS_ ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5 24.020572477871973 0.4289996903560794 3 [DP]S{M(Oxidation (M))|F}NE 6 5 42.457 0.0 0.0 4.1647 0.0 0.0 0.0 327.1667286991696 327.1667286991696 17.034021960761265 0.0 0.0 0.0 0 0.0 0.6989700043360187 1.110924374808178 0.8494850021680094 [DP]S{M(Oxidation (M))|F}NE 4.1647 - 509 1 1.372 48381.7 1.0 6643 5401 12042 HBL1_DMSO_200M_050219_1,12046 HBL1_DMSO_200M_050219_1,12046,PDSFNIPGSS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12047 61.975 8.1 8871200.0 25 0 587700.0 + 5892 DPYKVYRIV 9 95 384.8851537633373 1151.633631890212 3 384.8852416872978 MULTI CID FTMS 0 0 0 12042 5072096.0 0.2424922298297088 -2 0.2541694641113281 5 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 37.97399986684836 0.0865783450051559 3 DPYKVYR{I|L}V 9 0 + 76.178 0.0 0.0 6.6148 6.6148 94.285 0.0 0.0 0.0 62.68292352014652 10.299410666261409 10.299410666261409 76.17777354182661 0 0.1989700043360188 1.6989700043360187 0.0 0.4247425010840047 + + DPYKVYR{I|L}V 6.6148 + + 98 + 1 1.372 66810.7 1.0 6644 5401 12042 HBL1_DMSO_200M_050219_1,12047 HBL1_DMSO_200M_050219_1,12047,DPYKVYRIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12048 61.977 11.0 6683700.0 25 0 963190.0 + 3900 DALDVANKI 9 102 479.7637889425701 957.51302495194 2 479.7642089724541 MULTI CID FTMS 0 0 0 12042 4518249.5 0.2025320169389536 -2 0.2541694641113281 6 Unmodified _DALDVANKI_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;ENST00000491601.1_1_17:38595721-38595772:-|nuORF 78.7280429016045 0.0178249292250809 3 {[DA]|[EG]}{I|L}DVANK{I|L} 9 0 + 95.447 0.0 0.0 9.9682 9.9682 94.993 0.0 0.0 0.0 50.83974535948633 10.457574905606748 10.457574905606748 9.208187539523747 0 1.4749073637206092 2.0 0.3807196863200844 1.1307196863200843 + + {[DA]|[EG]}{I|L}DVANK{I|L};{[DA]|[EG]}{I|L}DVAGGK{I|L};WQ[RN]NK{I|L};WQ[RN]GGK{I|L};W[AG][RN]NK{I|L} 9.9682;9.0065;3.2294;2.255;2.255 +;-;-;-;- + 686 + 1 1.372 59240.9 1.0 6645 5401 12042 HBL1_DMSO_200M_050219_1,12048 HBL1_DMSO_200M_050219_1,12048,DALDVANKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12049 61.978 28.0 2052600.0 25 0 480370.0 -1 0 58 340.2093413180756 678.4041297029512 2 340.2091552615166 MULTI CID FTMS 0 0 0 12042 2513163.75 0.1418467291586943 4 -0.4081535339355469 7 3 Y 1 -1 1.5938 0.0 0.0 0.23493 0.0 0.0 339.2359911304887 173.08258997135002 512.3185811018387 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.23493 - 3 + 1 1.372 51422.8 1.0 6646 5401 12042 HBL1_DMSO_200M_050219_1,12049 HBL1_DMSO_200M_050219_1,12049, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12050 61.979 28.0 4751300.0 25 0 391320.0 + 5896 DPYKVYRIV 9 81 576.8238729693549 1151.6331930055096 2 576.8243286013603 MULTI CID FTMS 0 0 0 12042 2353781.75 0.2201459261370927 -3 0.2832870483398437 8 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 59.36838082759317 0.0264317782606298 3 DPYKVYR{I|L}V 9 0 + 77.176 0.0 0.0 6.7014 6.7014 86.854 0.0 0.0 0.0 18.327731244245346 5.061668675368622 5.061668675368622 6.262874945799766 0 2.2104093769761874 1.5228787452803376 0.0 0.0 + + DPYKVYR{I|L}V;DPYVKYR{I|L}V;[DP]YKVYR{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DKVYR{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVDYR{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KDVYR{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KV[YR]{I|L}DV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KV[YR]D{I|L}V;V[{M(Oxidation (M))|F}E]KVYR{I|L}V;V[{M(Oxidation (M))|F}E]VKYR{I|L}V 6.7014;6.1576;5.4508;5.431;4.8428;4.3012;4.1052;4.02;3.7509;3.2071 +;-;+;-;-;-;-;-;-;- + 436 + 1 1.372 103334.7 1.0 6647 5401 12042 HBL1_DMSO_200M_050219_1,12050 HBL1_DMSO_200M_050219_1,12050,DPYKVYRIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12051 61.98 21.0 3128300.0 25 0 445190.0 22280 LPRSQLSL 8 94 457.27770075507055 912.5408485769412 2 457.2778808474541 MULTI CID FTMS 0 0 0 12042 2187386.0 1.0 0 0.0 9 Unmodified _LPRSQLSL_ ENST00000262942.9_2_7:98923570-98930962:+|nuORF 54.773552608820026 0.1167943196628344 3 [{I|L}P][RN]{I|L}TS{I|L} 8 3 + 46.877 0.0 0.0 5.1369 5.1369 77.141 0.0 0.0 0.0 1.8394757280294272 33.15630099269626 1.8394757280294272 2.7422750325201406 0 0.9247425010840048 1.154901959985743 0.9247425010840048 0.0 [{I|L}P][RN]{I|L}TS{I|L};[{I|L}P][RN]T{I|L}S{I|L};{[MG]|[TS]}K[HK]{I|L}S{I|L};{[TV]|[{I|L}S]}A[KG][{I|L}P]D{I|L};{[TV]|[{I|L}S]}[KQ][{I|L}P]D{I|L};[{M(Oxidation (M))|F}V][{I|L}P]N[KP]V;[KP]{[NV]|[RG]}[KQ]S{I|L};{I|L}{[QN]|[E{I|L}]|[KN]}TN[KP]V 5.1369;4.8364;3.8994;2.664;2.6138;2.1184;1.6076;1.3204 -;-;-;-;-;-;-;- 236 1 1.372 56344.6 1.0 6648 5401 12042 HBL1_DMSO_200M_050219_1,12051 HBL1_DMSO_200M_050219_1,12051,LPRSQLSL True True LPRGGLTSI 61.98007 457.277880847454 21149596.0 12042.0 DENND3|p.K1131Rfs*22|1|0.3|ENSG00000105339|chr8:141192654-141192655|-/AA|frameshift_variant;;nc|ENSG00000105339|A2RUS2-3|DENND3;;ENSG00000105339|ENST00000519811|DENND3;;nc|ENSG00000105339|A2RUS2|DENND3;;nc|ENSG00000105339|A2RUS2-2|DENND3;;ENST00000520571.1_1_8:142199090-142200632:+|nuORF 2.1742541790008545 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12052 61.981 50.0 783890.0 25 0 45366.0 + 41903 VQEQNFPTV 9 88 531.2665694709665 1060.5185860087329 2 531.2668945193291 MULTI CID FTMS 0 0 0 12042 1413313.375 0.7150413517710361 1 -0.0301475524902343 10 Unmodified _VQEQNFPTV_ ENST00000352527.5_1_1:6086454-6100615:+|nuORF 49.93300154707207 0.0405168250806675 3 [TP]V[WD]{M(Oxidation (M))|F} 6 8 31.532 0.0 0.0 2.9733 0.0 0.0 0.0 312.15546280000166 312.15546280000166 8.46787486224656 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.2887254899964357 0.0 [TP]V[WD]{M(Oxidation (M))|F} 2.9733 - 191 1 1.372 41955.5 1.0 6649 5401 12042 HBL1_DMSO_200M_050219_1,12052 HBL1_DMSO_200M_050219_1,12052,VQEQNFPTV True True VQEQNFPTV 61.981401 531.266894519329 28135448.0 12042.0 ENST00000352527.5_1_1:6086454-6100615:+|nuORF 5.898467858632405 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12053 61.983 45.0 1898600.0 25 0 252290.0 + 19045 LDLYRLEK 8 62 525.3027976617408 1048.5910423902817 2 525.3033325076103 MULTI CID FTMS 0 0 0 12042 1324322.625 0.2735635165500724 -2 0.2541694641113281 11 Unmodified _LDLYRLEK_ REV__ENSG00000174123|ENST00000308973|TLR10 13.042465956692816 0.7182358012947757 3 {I|L}DYK{I|L}[W{I|L}]V 8 -1 + 63.933 0.0 0.0 6.097 6.097 77.822 0.0 0.0 0.0 36.40978057358332 1.0914446942506828 1.0914446942506828 1.0914446942506828 0 0.4247425010840047 2.0 0.0 0.0 {I|L}DYK{I|L}[W{I|L}]V;{I|L}DYK{I|L}{[RE]|[WV]}{I|L};{I|L}DY{I|L}K[W{I|L}]V;{I|L}DY{I|L}K{[RE]|[WV]}{I|L};{I|L}D{I|L}YK[W{I|L}]V;{I|L}D{I|L}YK{[RE]|[WV]}{I|L} 6.097;5.9929;5.642;5.5379;5.3549;5.2508 -;-;-;-;-;- 98 + 1 1.372 69010.6 1.0 6650 5401 12042 HBL1_DMSO_200M_050219_1,12053 HBL1_DMSO_200M_050219_1,12053,LDLYRLEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12054 61.984 42.0 1909700.0 25 0 304260.0 + + 37277 TIVEMLHKA 9 104 519.791667430783 1037.568781928366 2 521.2921630740166 MULTI CID FTMS 0 0 0 12042 1259754.0 1.0 0 0.0 12 Unmodified _TIPIMQHAK_ nc|ENSG00000156970|O60566-3|BUB1B;ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B 11.640296217721598 0.521594087909532 3 [{I|L}T][RP]MEV 7 -1 37.962 0.0 0.0 3.6588 0.0 0.0 0.0 208.10726197378509 208.10726197378509 26.99310692574741 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.3494850021680094 [{I|L}T][RP]MEV 3.6588 - 458 1 1.372 70288.9 1.0 6651 5401 12042 HBL1_DMSO_200M_050219_1,12054 HBL1_DMSO_200M_050219_1,12054,TIPIMQHAK False False TIVEMLHKA 61.983843 521.292163074017 9387515.0 12042.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B;;nc|ENSG00000156970|O60566-2|BUB1B 5.827057202657064 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12055 61.985 39.0 1359700.0 25 0 126450.0 + 22632 LPYPIHQV 8 70 483.7743679929477 965.5341830526952 2 483.7743408083916 MULTI CID FTMS 0 0 0 12042 1211229.125 0.3760761240872332 -4 0.40924072265625 13 Unmodified _LPYPIHQV_ ENSG00000176444|ENST00000368361|CLK2;ENST00000416636.2_1_7:23624683-23625604:-|nuORF;ENST00000497188.1_1_1:155234069-155238352:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2 46.92087301778293 0.1537303740847981 3 {I|L}PY[{I|L}P]HQV 8 0 + 56.641 0.0 0.0 5.8663 5.8663 89.607 0.0 0.0 0.0 21.771081482726373 9.474119043930216 9.474119043930216 15.371381606472587 0 0.6989700043360187 1.6989700043360187 0.0 0.6109243748081782 + + {I|L}PY[{I|L}P]HQV;{I|L}PY[{I|L}P]H[AG]V;{I|L}[{I|L}T]QQHQV;{I|L}[{I|L}T]QH{I|L}{[QN]|[E{I|L}]|[KN]};{I|L}[{I|L}T]QHQQV;{I|L}{[SA]|[TG]}[{I|L}A]QHQV;{I|L}{[SA]|[TG]}[{I|L}A]H{I|L}{[QN]|[E{I|L}]|[KN]};{I|L}{[SA]|[TG]}[{I|L}A]HQQV;{I|L}[{I|L}T][AG]QHQV;{I|L}[{I|L}T]Q[AG]HQV 5.8663;4.2743;2.5266;2.4436;2.4209;2.0615;1.9785;1.9558;1.5674;1.5674 +;-;-;-;-;-;-;-;-;- + 327 + 1 1.372 48280.3 1.0 6652 5401 12042 HBL1_DMSO_200M_050219_1,12055 HBL1_DMSO_200M_050219_1,12055,LPYPIHQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12056 61.986 55.0 1173500.0 25 0 154320.0 41379 VPKTPVEI 8 85 441.7680744852922 881.5215960373844 2 441.7681152224541 MULTI CID FTMS 0 0 0 12042 931594.5 0.4977222434631329 9 -0.8171463012695312 14 Unmodified _VPKTPVEI_ ENST00000529587.1_1_11:9806704-9806878:-|nuORF 25.399314129420983 0.5099049743284904 3 VP{I|L}{I|L}{M(Oxidation (M))|F}SPG 8 6 52.573 0.0 0.0 5.9639 0.0 0.0 0.0 68.05140100650624 68.05140100650624 33.187587626244124 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 VP{I|L}{I|L}{M(Oxidation (M))|F}SPG 5.9639 - 254 + 1 1.372 54085.0 1.0 6653 5401 12042 HBL1_DMSO_200M_050219_1,12056 HBL1_DMSO_200M_050219_1,12056,VPKTPVEI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12057 61.988 68.0 714360.0 25 0 137330.0 + 38938 TVMDSKIVQV 10 78 560.307109767732 1118.5996666022638 2 560.3085204958916 MULTI CID FTMS 0 0 0 12042 831577.5 0.087693559031194 3 -0.2753028869628906 15 Unmodified _TVMDSKIVQV_ ENSG00000025800|ENST00000373625|KPNA6;ENSG00000114030|ENST00000344337|KPNA1;ENSG00000196911|ENST00000368564|KPNA5 23.78978130925829 0.4341852049148378 3 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VTSA 9 6 60.2 0.0 0.0 5.3817 0.0 0.0 0.0 183.10214397947007 183.10214397947007 47.10077508221467 0.0 0.0 0.0 0 0.5 2.0 1.6861818737241734 0.0 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VTSA 5.3817 - 409 1 1.372 42450.8 1.0 6654 5401 12042 HBL1_DMSO_200M_050219_1,12057 HBL1_DMSO_200M_050219_1,12057,TVMDSKIVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12058 61.989 41.0 1233400.0 25 0 225940.0 28130 PPPLPPPAL 9 73 449.7730721368604 897.5315913405208 2 449.7735778689384 MULTI CID FTMS 0 0 0 12042 759085.8125 0.4139416938512409 9 -0.8171463012695312 16 Unmodified _PPPLPPPAL_ ENSG00000066855|ENST00000262146|MTFR1;ENST00000345990.8_2_5:122847977-122881201:+|nuORF;ENST00000355387.6_1_1:44870947-44877656:+|nuORF;ENST00000361799.6_1_1:44870995-44877742:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;ENST00000511130.6_1_5:122848133-122909123:+|nuORF;ENST00000512718.7_1_5:122848133-122888819:+|nuORF;nc|ENSG00000066855|Q15390-2|MTFR1;REV__ENST00000517764.1_1_8:94929984-94930038:+|nuORF 28.17323086031832 0.1727213568982648 3 [{I|L}P][VS]P 5 6 26.311 0.0 0.0 2.9315 0.0 0.0 0.0 401.2182117841333 401.2182117841333 14.71726222832956 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 [{I|L}P][VS]P 2.9315 - 134 1 1.372 47592.5 1.0 6655 5401 12042 HBL1_DMSO_200M_050219_1,12058 HBL1_DMSO_200M_050219_1,12058,PPPLPPPAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12059 61.991 72.0 1392500.0 25 0 167170.0 + 5222 DIYKIREI 8 92 350.5378481900325 1048.5917151702974 3 350.5376464724541 MULTI CID FTMS 0 0 0 12042 723160.3125 0.2267559637825892 -2 0.2541694641113281 17 Unmodified _DIYKIREI_ ENSG00000133112|ENST00000530705|TPT1;ENST00000442760.2_1_13:45914489-45915204:-|nuORF 24.020572477871973 0.5389365498350341 3 {NN|[MP]|[D{I|L}]|[EV]}YK{I|L}{[RE]|[WV]}{I|L} 8 0 + 51.54 0.0 0.0 4.9151 4.9151 77.037 0.0 0.0 0.0 40.11973518188636 2.677287669604312 2.677287669604312 3.0102999566398125 0 0.2396518287104437 2.0 0.0 0.6747425010840047 + + {NN|[MP]|[D{I|L}]|[EV]}YK{I|L}{[RE]|[WV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}K{[RE]|[WV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}YK{I|L}[W{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}K[W{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}YKK[RN]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}YK{[RE]|[WV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}YKK[R{I|L}]N;{NN|[MP]|[D{I|L}]|[EV]}{I|L}YK[W{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}YKAA[KQ]{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}{[NV]|[RG]}{[TV]|[{I|L}S]}{I|L} 4.9151;4.6281;4.3597;4.0726;4.0101;3.9359;3.8708;3.3805;3.0513;2.5132 +;-;-;-;-;-;-;-;-;- + 175 + 1 1.372 84990.1 1.0 6656 5401 12042 HBL1_DMSO_200M_050219_1,12059 HBL1_DMSO_200M_050219_1,12059,DIYKIREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12060 61.992 58.0 882850.0 25 0 66253.0 + 2974 AVIEHLERL 9 79 360.5448856289518 1078.6128274870557 3 360.5449096560478 MULTI CID FTMS 0 0 0 12042 693454.8125 0.3472603423566605 1 -0.0301475524902343 18 Unmodified _AVIEHLERL_ ENSG00000257218|ENST00000551765|GATC 19.361941925380144 0.3125782356748823 3 {[VA]|[{I|L}G]}{I|L}EH{I|L}E[R{I|L}] 9 0 + 61.092 0.0 0.0 5.664 5.664 78.177 0.0 0.0 0.0 27.147642715192504 2.1208891232720006 2.1208891232720006 2.1208891232720006 0 0.2742275032520141 2.0 0.4247425010840047 0.0 + + {[VA]|[{I|L}G]}{I|L}EH{I|L}E[R{I|L}];{[VA]|[{I|L}G]}{I|L}EH{I|L}[NG]KV;{[VA]|[{I|L}G]}{I|L}E{I|L}HE[R{I|L}];{[VA]|[{I|L}G]}{I|L}E{I|L}H[NG]KV;{[VA]|[{I|L}G]}{I|L}EH{I|L}[W{I|L}]V;{[VA]|[{I|L}G]}{I|L}E{I|L}H[W{I|L}]V 5.664;5.4674;5.3849;5.1883;5.1408;4.8617 +;-;-;-;-;- + 167 + 1 1.372 49414.7 1.0 6657 5401 12042 HBL1_DMSO_200M_050219_1,12060 HBL1_DMSO_200M_050219_1,12060,AVIEHLERL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12061 61.994 62.0 861940.0 25 0 85369.0 + 34994 SQMPVPVHV 9 87 497.26479322952594 992.515033525852 2 497.2633239626884 MULTI CID FTMS 0 0 0 12042 363530.3125 0.6126883324943279 -2 0.2541694641113281 19 Unmodified _SQMPVPVHV_ ENSG00000160218|ENST00000291574|TRAPPC10 18.13498045792455 0.3457906370836843 3 {I|L} 1 9 13.495 0.0 0.0 1.3597 0.0 0.0 861.4201523996785 0.0 861.4201523996785 0.0 1.153025174779284 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3597 - 123 + 1 1.372 46827.1 1.0 6658 5401 12042 HBL1_DMSO_200M_050219_1,12061 HBL1_DMSO_200M_050219_1,12061,SQMPVPVHV False True SQMPVPVHV 61.993857 497.263323962688 3265590.75 12042.0 ENSG00000160218|ENST00000291574|TRAPPC10 6.204916954040527 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12062 61.997 130.0 497370.0 25 0 27193.0 + 2021 APFQSMQTV 9 113 504.7442807971725 1007.474008661145 2 504.7446777224541 MULTI CID FTMS 0 0 0 12042 333500.15625 0.2522605818442433 -2 0.2541694641113281 20 Unmodified _APFQSMQTV_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 39.957323273325 0.0756908302845263 3 GASMQEA 7 6 37.638 0.0 0.0 3.7358 0.0 0.0 315.1591053693375 0.0 315.1591053693375 0.0 18.18713533038057 0.0 0.0 0 0.3935078169319297 0.0 0.6747425010840047 0.0 GASMQEA 3.7358 - 743 1 1.372 53098.3 1.0 6659 5401 12042 HBL1_DMSO_200M_050219_1,12062 HBL1_DMSO_200M_050219_1,12062,APFQSMQTV True True APFQSMQTV 61.996507 504.744677722454 11771489.0 12042.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 5.901512145996094 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12064 62.001 25.0 2709100.0 25 0 280340.0 + 6491 EAIKALEV 8 88 436.7575875555992 871.5006221779984 2 436.7579528689384 MULTI CID FTMS 0 0 0 12063 1985676.875 0.8009382404766721 1 -0.1436233520507812 1 Unmodified _EAIKALEV_ ENSG00000172262|ENST00000682664|ZNF131;nc|ENSG00000172262|P52739-2|ZNF131 50.855029805455786 0.1352255786796883 3 EV 2 6 21.744 0.0 0.0 2.495 0.0 0.0 625.3792975703797 0.0 625.3792975703797 0.0 4.171717351297236 0.0 0.0 0 0.0 0.0 0.5 0.0 + EV 2.495 + + 142 + 1 1.372 58260.2 1.0 6660 5402 12063 HBL1_DMSO_200M_050219_1,12064 HBL1_DMSO_200M_050219_1,12064,EAIKALEV False False EAIKALEV 62.00079 436.757952868938 18851388.0 12063.0 ENSG00000172262|ENST00000682664|ZNF131;;nc|ENSG00000172262|P52739-2|ZNF131 0.4252351100246112 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12065 62.002 41.0 2173700.0 25 0 675630.0 + 24557 MLEARIPALI 10 80 376.2262199549866 0 376.2258483767509 PEAK CID FTMS 0 0 0 12063 1310082.625 0.1011504188675789 10 -0.9311599731445312 2 Unmodified _MLEARIPALI_ REV__ENSG00000204479|ENST00000376098|PRAMEF17 11.640296217721598 0.3623705791714445 3 M 1 -1 6.9897 0.0 0.0 0.93142 0.0 0.0 534.307895376967 82.0669191949828 616.3748145719499 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.93142 + + 35 + 1 1.372 74645.7 1.0 6661 5402 12063 HBL1_DMSO_200M_050219_1,12065 HBL1_DMSO_200M_050219_1,12065,MLEARIPALI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12066 62.004 88.0 1092400.0 25 0 114720.0 -1 VNREMMCS 8 116 529.708685256436 1057.4028175796718 2 529.7089721560478 MULTI CID FTMS 0 0 0 12063 2307087.0 1.0 0 0.0 3 Carbamidomethyl (C),2 Oxidation (M) _VNREM(Oxidation (M))M(Oxidation (M))C(Carbamidomethyl (C))S_ ENSG00000167202|ENST00000300584|TBC1D2B;ENST00000472786.1_1_15:78295640-78309087:-|nuORF;nc|ENSG00000167202|Q9UPU7-2|TBC1D2B;nc|ENSG00000167202|Q9UPU7-3|TBC1D2B 16.942295170755138 0.6606234159769251 3 VNPD 4 -1 58.716 0.0 0.0 5.5529 0.0 0.0 0.0 629.1893032788137 629.1893032788137 47.457399743716486 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.3807196863200844 VNPD 5.5529 - 54 + 1 1.372 82822.7 1.0 6662 5402 12063 HBL1_DMSO_200M_050219_1,12066 HBL1_DMSO_200M_050219_1,12066,VNREMMCS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12067 62.006 83.0 1081100.0 25 0 193070.0 -1 APMACHEGGV 10 115 522.7136714547337 1043.4127899762673 2 522.7136718630791 MULTI CID FTMS 0 0 0 12063 1009543.5 1.0 0 0.0 4 Carbamidomethyl (C),Oxidation (M) _APM(Oxidation (M))AC(Carbamidomethyl (C))HEGGV_ ENSG00000114648|ENST00000232766|KLHL18;nc|ENSG00000114648|O94889-2|KLHL18 11.640296217721598 0.652229146672156 3 DEVNV 5 -1 23.589 0.0 0.0 2.2607 0.0 0.0 469.1554432599625 0.0 469.1554432599625 0.0 8.984484532805155 0.0 0.0 0 0.2742275032520141 0.0 1.305462187404089 0.0 DEVNV 2.2607 - 245 1 1.372 78053.1 1.0 6663 5402 12063 HBL1_DMSO_200M_050219_1,12067 HBL1_DMSO_200M_050219_1,12067,APMACHEGGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12068 62.008 82.0 1100400.0 25 0 355790.0 + -1 YYLNELCGHFS 11 77 701.8096066210139 1401.6046603088278 2 701.8102905154228 MULTI CID FTMS 0 0 0 12063 717462.625 1.0 0 0.0 5 Carbamidomethyl (C) _YYLNELC(Carbamidomethyl (C))GHFS_ REV__ENSG00000106714|ENST00000297668|CNTNAP3;REV__ENSG00000154529|ENST00000377561|CNTNAP3B;REV__ENSG00000283378|ENST00000636699|CNTNAP3C;REV__ENST00000377653.2_1_9:39174468-39266986:-|nuORF;REV__nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;REV__nc|ENSG00000283378|Q9BZ76-2|CNTNAP3 20.41453444215458 0.6105011870913812 3 YY{I|L}T[DN]DP[DG]{I|L} 11 -1 66.057 0.0 0.0 4.713 0.0 0.0 0.0 132.0457705133422 132.0457705133422 41.59311994974547 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7059771852360797 0.6747425010840047 YY{I|L}T[DN]DP[DG]{I|L} 4.713 - 336 + 1 1.372 70128.4 1.0 6664 5402 12063 HBL1_DMSO_200M_050219_1,12068 HBL1_DMSO_200M_050219_1,12068,YYLNELCGHFS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12069 62.011 196.0 612890.0 25 0 76034.0 -1 MCCDFPDI 8 145 537.1920513762099 1072.3695498192196 2 537.1920043826103 MULTI CID FTMS 0 0 0 12063 522014.5625 1.0 0 0.0 6 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DFPDI_ ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14 10.183394434864962 0.7604730176254005 3 [C(Carbamidomethyl (C)){M(Oxidation (M))|F}][DG]G{M(Oxidation (M))|F}[SG]QV 10 -1 [C(Carbamidomethyl (C)){M(Oxidation (M))|F}][DG]G{M(Oxidation (M))|F}[SG]Q + + 12.764 -5.083 -0.53209 1.1903 1.1903 48.41 0.0 0.0 0.0 0.0 -3.315965325646143 -3.315965325646143 0.0 0 0.0 0.0 0.0 0.0 [C(Carbamidomethyl (C)){M(Oxidation (M))|F}][DG]G{M(Oxidation (M))|F}[SG]QV 1.1903 - 822 + 1 1.372 97209.2 1.0 6665 5402 12063 HBL1_DMSO_200M_050219_1,12069 HBL1_DMSO_200M_050219_1,12069,MCCDFPDI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12070 62.019 437.0 205490.0 25 0 66019.0 + -1 TQNCPQECSFY 11 103 717.2754833866322 1432.5364138400644 2 717.7775146365166 MULTI CID FTMS 0 0 0 12063 489338.25 1.0 0 0.0 7 2 Carbamidomethyl (C) _TQNC(Carbamidomethyl (C))PQEC(Carbamidomethyl (C))SFY_ REV__ENSG00000145839|ENST00000274520|IL9 5.731851221503515 0.8481046878870278 3 TY 2 -1 19.38 0.0 0.0 1.3529 0.0 0.0 1150.41420422268 0.0 1150.41420422268 0.0 4.274852466137133 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TY 1.3529 - 170 + 1 1.372 70347.4 1.0 6666 5402 12063 HBL1_DMSO_200M_050219_1,12070 HBL1_DMSO_200M_050219_1,12070,TQNCPQECSFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12071 62.022 157.0 432770.0 25 0 89919.0 + 33684 SIYNGDMEKI 10 84 585.2786538291008 1168.5427547250015 2 585.2800781130791 MULTI CID FTMS 0 0 0 12063 373052.21875 0.0994817390227233 -2 0.1964187622070312 8 Unmodified _SIYNGDMEKI_ ENSG00000176171|ENST00000368636|BNIP3;ENST00000550043.1_1_14:28733783-28734191:+|nuORF 41.95555342248728 0.1369168616057562 3 {[TV]|[{I|L}S]}YN 4 6 53.188 0.0 0.0 4.5516 0.0 0.0 0.0 688.2992353339225 688.2992353339225 25.932408374341023 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.8494850021680094 + {[TV]|[{I|L}S]}YN 4.5516 + + 166 + 1 1.372 53639.4 1.0 6667 5402 12063 HBL1_DMSO_200M_050219_1,12071 HBL1_DMSO_200M_050219_1,12071,SIYNGDMEKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12072 62.024 75.0 745030.0 25 0 75513.0 + 24230 MALIQHSTI 9 100 507.27587207481713 1012.5371912164344 2 507.2759582400322 MULTI CID FTMS 0 0 0 12063 333545.53125 0.2516930128502493 -1 0.0301475524902343 9 Unmodified _MALIQHSTI_ ENSG00000056736|ENST00000288167|IL17RB;ENST00000475124.1_1_3:53880615-53891834:+|nuORF;nc|ENSG00000056736|Q9NRM6-2|IL17RB 39.94969957227396 0.0757326808254658 3 MA{I|L}{I|L}GA[DN]VG 10 6 67.374 0.0 0.0 6.654 0.0 0.0 0.0 68.05136285953358 68.05136285953358 44.5205343810445 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.8807196863200843 0.0 MA{I|L}{I|L}GA[DN]VG 6.654 - 469 + 1 1.372 53042.6 1.0 6668 5402 12063 HBL1_DMSO_200M_050219_1,12072 HBL1_DMSO_200M_050219_1,12072,MALIQHSTI True True MALIQHSTI 62.024074 507.275958240032 9066187.0 12063.0 ENST00000475124.1_1_3:53880615-53891834:+|nuORF;;nc|ENSG00000056736|Q9NRM6-2|IL17RB;;ENSG00000056736|ENST00000288167|IL17RB 6.662428696950276 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12073 62.029 276.0 343070.0 25 0 35792.0 19517 LFLVGSST 8 145 412.2303899297853 822.4462269263706 2 412.2299682497978 MULTI CID FTMS 0 0 0 12063 198419.6875 0.074335022314216 15 -1.2644691467285156 10 Unmodified _LFLVGSST_ ENST00000448022.1_1_7:114563557-114563668:+|nuORF 6.354104778181461 0.7857632046190106 3 {I|L} 1 7 10.837 0.0 0.0 1.3177 0.0 0.0 691.3512695062519 0.0 691.3512695062519 0.0 2.342605414788723 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3177 + + 46 + 1 1.372 74672.6 1.0 6669 5402 12063 HBL1_DMSO_200M_050219_1,12073 HBL1_DMSO_200M_050219_1,12073,LFLVGSST False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12074 62.041 654.0 160420.0 25 0 8450.4 -1 AWIYCESLS 9 164 564.7535189901482 1127.4924850470964 2 564.7584716677666 MULTI CID FTMS 0 0 0 12063 207643.359375 0.2802011728949829 10 -0.9311599731445312 11 Carbamidomethyl (C) _AWIYC(Carbamidomethyl (C))ESLS_ ENSG00000167543|ENST00000301057|TP53I13;ENST00000579674.1_1_17:27898877-27899117:+|nuORF 7.910154910731844 0.6385446671287552 3 V 1 -1 10.969 0.0 0.0 0.97288 0.0 0.0 1010.4130229272706 0.0 1010.4130229272706 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.97288 - 242 + 1 1.372 81806.5 1.0 6670 5402 12063 HBL1_DMSO_200M_050219_1,12074 HBL1_DMSO_200M_050219_1,12074,AWIYCESLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12075 62.046 299.0 353100.0 25 0 34236.0 + 7705 ELAKELPQV 9 137 513.7957833398337 1025.5770137464674 2 513.7969238162041 MULTI CID FTMS 0 0 0 12063 205446.3125 0.5474410518544499 -2 0.1964187622070312 12 Unmodified _ELAKELPQV_ ENSG00000108010|ENST00000331244|GLRX3 47.594388314883695 0.0456443387682827 3 {[QN]|[E{I|L}]|[KN]}GV[PG]{I|L}DKV 10 6 + 49.812 0.0 0.0 4.857 4.857 71.903 0.0 0.0 0.0 4.825331994026335 4.825331994026335 4.825331994026335 0.0649873629158293 0 0.4247425010840047 1.5228787452803376 0.8274509799928715 0.0 {[QN]|[E{I|L}]|[KN]}GV[PG]{I|L}DKV;{[QN]|[E{I|L}]|[KN]}KPPTDKV;{[QN]|[E{I|L}]|[KN]}P{[NV]|[RG]}{I|L}DKV;{[QN]|[E{I|L}]|[KN]}PKPTDKV;{[QN]|[E{I|L}]|[KN]}[WR]VPQV;[{I|L}T]QVDQ{I|L}[{I|L}P];{[QN]|[E{I|L}]|[KN]}KADQ{I|L}[{I|L}P];{[QN]|[E{I|L}]|[KN]}AKDQ{I|L}[{I|L}P];{[QN]|[E{I|L}]|[KN]}KA{[QN]|[E{I|L}]|[KN]}N[{I|L}P];{[QN]|[E{I|L}]|[KN]}AK{[QN]|[E{I|L}]|[KN]}N[{I|L}P] 4.857;4.8507;4.8071;4.679;4.3865;4.3622;4.1643;4.1188;3.9965;3.9509 -;-;-;-;-;-;-;-;-;- 3627 1 1.372 86348.8 1.0 6671 5402 12063 HBL1_DMSO_200M_050219_1,12075 HBL1_DMSO_200M_050219_1,12075,ELAKELPQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12076 62.049 149.0 704640.0 25 0 107500.0 + + 33616 KAIEQADLL 9 142 500.7876000011476 0 500.7869445681572 PEAK CID FTMS 0 0 0 12063 237979.375 0.6966755923765229 1 -0.1436233520507812 13 Unmodified _SIQLEGQLL_ ENSG00000106367|ENST00000337619|AP1S1;nc|ENSG00000182287|P56377-2|AP1S2;ENSG00000182287|ENST00000672987|AP1S2;nc|ENSG00000182287|P56377|AP1S2 30.63653989081413 0.1077493867305487 3 {I|L}DAQEN{I|L} 7 -1 29.946 0.0 0.0 2.9959 0.0 0.0 131.09886835991398 82.06693445377186 213.16580281368584 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.3807196863200844 0.3494850021680094 {I|L}DAQEN{I|L} 2.9959 - 1025 + 1 1.372 84040.5 1.0 6672 5402 12063 HBL1_DMSO_200M_050219_1,12076 HBL1_DMSO_200M_050219_1,12076,SIQLEGQLL False False KAIEQADLL 62.048994 500.786944568157 1029781.3125 12063.0 ENSG00000106367|ENST00000337619|AP1S1;;nc|ENSG00000182287|P56377-2|AP1S2;;ENSG00000182287|ENST00000672987|AP1S2;;nc|ENSG00000182287|P56377|AP1S2 1.8411933183670044 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12077 62.055 344.0 364680.0 25 0 18114.0 -1 YYFLEESTGYM 11 132 473.530934034923 1417.570972704969 3 473.5310546755791 MULTI CID FTMS 0 0 0 12063 152823.625 0.8613456815597289 2 -0.2451553344726562 14 Oxidation (M) _YYFLEESTGYM(Oxidation (M))_ ENSG00000196218|ENST00000359596|RYR1;nc|ENSG00000196218|P21817-2|RYR1;nc|ENSG00000196218|P21817-3|RYR1 4.715918219556657 0.8528979259967293 3 YY 2 -1 36.198 0.0 0.0 2.5535 0.0 0.0 0.0 1088.423397049555 1088.423397049555 16.426636542171686 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 YY 2.5535 + + 1039 + 1 1.372 100556.0 1.0 6673 5402 12063 HBL1_DMSO_200M_050219_1,12077 HBL1_DMSO_200M_050219_1,12077,YYFLEESTGYM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12078 62.07 778.0 542700.0 25 0 50978.0 + 2590 KTVPLLSKV 9 294 492.7900812094747 983.5656094857494 2 492.7899047732353 MULTI CID FTMS 0 0 0 12063 145425.640625 0.800778835551285 -1 0.0301475524902343 15 Unmodified _ASLQTVPGVI_ ENSG00000161800|ENST00000312377|RACGAP1 36.12702656103203 0.1984647928738587 3 {[SA]|[TG]}{I|L}QEVPK{I|L} 9 3 + 59.114 0.0 0.0 6.0102 6.0102 76.034 0.0 0.0 0.0 0.2175069177594153 7.470369723746224 0.2175069177594153 0.2175069177594153 0 0.3494850021680094 1.0457574905606752 0.6382104921644451 0.4957416651753049 {[SA]|[TG]}{I|L}QEVPK{I|L};{I|L}SAQEVPK{I|L};{[SA]|[TG]}{I|L}QEVP{I|L}K;{I|L}SAQEVP{I|L}K;{[SA]|[TG]}{I|L}[AG]EVPK{I|L};{I|L}SA[AG]EVPK{I|L};{[SA]|[TG]}{I|L}QEVKP{I|L};{I|L}SAQEVKP{I|L};{[SA]|[TG]}{I|L}[AG]EVP{I|L}K;{I|L}SA[AG]EVP{I|L}K 6.0102;5.9881;5.2507;5.2286;5.074;5.0519;4.9918;4.9697;4.3145;4.2924 -;-;-;-;-;-;-;-;-;- 3381 + 1 1.372 311549.7 1.0 6674 5402 12063 HBL1_DMSO_200M_050219_1,12078 HBL1_DMSO_200M_050219_1,12078,ASLQTVPGVI False False KTVPLLSKV 62.069828 492.789904773235 3074497.25 12063.0 ENSG00000161800|ENST00000312377|RACGAP1 4.07433573404948 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12079 62.084 800.0 138240.0 25 0 6657.0 + 16935 KILETVMVQET 11 152 645.8521837838094 1289.6898146344188 2 645.8528320193291 MULTI CID FTMS 0 0 0 12063 146216.59375 0.9507344069333312 1 -0.1436233520507812 16 Unmodified _KILETVMVQET_ ENSG00000080839|ENST00000373664|RBL1;nc|ENSG00000080839|P28749-2|RBL1 61.08992128646608 0.0647217981198246 3 {[ET]|[MV]}Q[KS][K{I|L}]VQET 11 7 + 50.882 0.0 0.0 3.9453 3.9453 69.628 0.0 0.0 0.0 0.4017337976594817 0.4017337976594817 0.4017337976594817 0.4017337976594817 0 0.6886218330464625 0.0 1.8979400086720373 0.8494850021680094 {[ET]|[MV]}Q[KS][K{I|L}]VQET;[{M(Oxidation (M))|F}T]QV[K{I|L}][KS]QDP;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T[KS][K{I|L}]VQET;[AG]ET[KS][K{I|L}]VQET;{[TV]|[{I|L}S]}[K{I|L}]{[QN]|[E{I|L}]|[KN]}MVQET;[AG]V{I|L}T{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VQET;{[ET]|[MV]}[{I|L}V][K{I|L}]MVQET;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}T{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VQET;{[TV]|[{I|L}S]}[Q{I|L}]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VQET;{[DA]|[EG]}AT[KS][K{I|L}]VQET 3.9453;3.9142;3.7109;3.6161;3.556;3.529;3.3266;3.2945;3.203;3.1969 -;-;-;-;-;-;-;-;-;- 1592 1 1.372 86869.7 0.9900000095367432 6675 5402 12063 HBL1_DMSO_200M_050219_1,12079 HBL1_DMSO_200M_050219_1,12079,KILETVMVQET True True KILETVMVQET 62.083665 645.852832019329 1178095.125 12063.0 ENSG00000080839|ENST00000373664|RBL1;;nc|ENSG00000080839|P28749-2|RBL1 5.662228425343831 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12080 62.097 800.0 189200.0 25 0 13058.0 + 4562 DAYREAQQLV 10 156 596.8005667765214 1191.5865806198426 2 596.8011962771416 MULTI CID FTMS 0 0 0 12063 146438.109375 0.5774849820331565 -1 0.0301475524902343 17 Unmodified _DAYREAQQLV_ ENSG00000173020|ENST00000308595|GRK2;ENST00000416281.6_1_11:67049840-67052918:+|nuORF;ENST00000524899.1_1_11:67052494-67052918:+|nuORF 55.23464941255904 0.0494277333541689 3 {[DA]|[EG]}YREAQQ{I|L}V 10 0 + 79.739 0.0 0.0 6.6918 6.6918 89.448 0.0 0.0 0.0 19.86383801916871 15.026975159433531 15.026975159433531 9.164539485499262 0 1.16944517631652 1.6989700043360187 0.6747425010840047 0.3494850021680094 + + {[DA]|[EG]}YREAQQ{I|L}V;{[DA]|[EG]}Y[VG]EAQQ{I|L}V;{[DA]|[EG]}YREAQ[AG]{I|L}V;{[DA]|[EG]}YREA[AG]Q{I|L}V;{[DA]|[EG]}YRAAQW{I|L}V;{[DA]|[EG]}YRAAWQ{I|L}V;{[DA]|[EG]}YRAAQAD{I|L}V;{[DA]|[EG]}Y[VG]EAQ[AG]{I|L}V;{[DA]|[EG]}Y[VG]EA[AG]Q{I|L}V;{[DA]|[EG]}YREA[AG][AG]{I|L}V 6.6918;5.9227;5.9227;5.9227;5.2434;5.2231;5.2087;5.1566;5.1566;5.1566 +;-;-;-;-;-;-;-;-;- + 5373 1 1.372 113994.1 0.9900000095367432 6676 5402 12063 HBL1_DMSO_200M_050219_1,12080 HBL1_DMSO_200M_050219_1,12080,DAYREAQQLV True True DAYREAQQLV 62.097497 596.801196277142 2013293.875 12063.0 ENST00000524899.1_1_11:67052494-67052918:+|nuORF;;ENSG00000173020|ENST00000308595|GRK2;;ENST00000416281.6_1_11:67049840-67052918:+|nuORF 7.416455109914144 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12081 62.112 800.0 265480.0 25 0 19835.0 -1 MVIMGDGL 8 223 426.2048250891089 0 426.2053710818291 PEAK CID FTMS 0 0 0 12063 142171.203125 1.0 0 0.0 18 Oxidation (M) _MVIM(Oxidation (M))GDGL_ ENSG00000141424|ENST00000269187|SLC39A6;nc|ENSG00000141424|Q13433-2|SLC39A6 6.354104778181461 0.5763711549229614 3 P 1 -1 5.4846 0.0 0.0 0.64494 0.0 0.0 111.9302435016444 638.3884981744749 750.3187416761193 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.64494 - 59 + 1 1.372 165516.7 0.8100000023841858 6677 5402 12063 HBL1_DMSO_200M_050219_1,12081 HBL1_DMSO_200M_050219_1,12081,MVIMGDGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12082 62.126 800.0 212220.0 25 0 12580.0 + 7954 ELSQRTFTV 9 202 540.7880924643546 0 540.8134033083916 PEAK CID FTMS 0 0 0 12063 28265.58203125 0.672478934351607 -1 0.0301475524902343 19 Unmodified _ELSQRTFTV_ REV__ENSG00000227345|ENST00000616448|PARG;REV__nc|ENSG00000227345|Q86W56-2|PARG;REV__nc|ENSG00000227345|Q86W56-3|PARG;REV__nc|ENSG00000227345|Q86W56-4|PARG;REV__nc|ENSG00000227345|Q86W56-5|PARG 12.531546534597751 0.2832320739326029 3 E{I|L}AH 4 -1 14.702 0.0 0.0 1.3619 0.0 0.0 265.15509010273405 361.1637056940063 626.3187957967403 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}AH 1.3619 - 339 + 1 1.372 134740.3 0.9399999976158142 6678 5402 12063 HBL1_DMSO_200M_050219_1,12082 HBL1_DMSO_200M_050219_1,12082,ELSQRTFTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12083 62.14 800.0 177870.0 25 0 11018.0 + 43370 WPYGNRQEI 9 150 581.7858856037438 1161.5572182742876 2 581.7854492068291 MULTI CID FTMS 0 0 0 12063 104043.71875 0.3575966541814622 -3 0.2843170166015625 20 Unmodified _WPYGNRQEI_ ENSG00000119392|ENST00000309971|GLE1;nc|ENSG00000119392|Q53GS7-2|GLE1 47.74868867922204 0.0453060283459952 3 WPYGN 5 4 62.053 0.0 0.0 5.3422 0.0 0.0 0.0 541.2736910455686 541.2736910455686 38.67877506637882 0.0 0.0 0.0 0 0.6747425010840047 1.3010299956639813 0.0 1.1237125054200234 + WPYGN 5.3422 + + 1451 + 1 1.372 108228.6 0.8999999761581421 6679 5402 12063 HBL1_DMSO_200M_050219_1,12083 HBL1_DMSO_200M_050219_1,12083,WPYGNRQEI True True WPYGNRQEI 62.140148 581.785449206829 5904681.5 12063.0 ENSG00000119392|ENST00000309971|GLE1;;nc|ENSG00000119392|Q53GS7-2|GLE1 6.094074885050456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12085 62.144 3.8 11122000.0 25 0 1884400.0 + 25292 NACFAMDPDL 10 59 548.7261718956482 1095.4377908580964 2 548.7274658083916 MULTI CID FTMS 0 0 0 12084 14891186.0 0.9597033393018388 2 -0.2343826293945312 1 Unmodified _NACFAMDPDL_ REV__ENSG00000083444|ENST00000196061|PLOD1;REV__ENST00000491536.5_1_1:12024755-12035393:+|nuORF;REV__nc|ENSG00000083444|Q02809-2|PLOD1 6.723162845929126 0.6955379296933136 3 {[QG]|[NA]}{I|L} 3 -1 28.829 0.0 0.0 2.6318 0.0 0.0 0.0 794.2500250537004 794.2500250537004 14.163617425480888 0.0 0.0 0.0 0 0.0 2.0 0.0 0.2887254899964357 {[QG]|[NA]}{I|L} 2.6318 - 36 1 1.374 38089.3 1.0 6680 5403 12084 HBL1_DMSO_200M_050219_1,12085 HBL1_DMSO_200M_050219_1,12085,NACFAMDPDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12086 62.147 106.0 772490.0 25 0 126720.0 + 37940 TMAKESSIIGV 11 107 568.305117647299 1134.5956823613978 2 568.3053466677666 MULTI CID FTMS 0 0 0 12084 688951.0 0.3326773875434844 2 -0.2343826293945312 2 Unmodified _TMAKESSIIGV_ ENSG00000116791|ENST00000340866|CRYZ;nc|ENSG00000116791|Q08257-2|CRYZ;nc|ENSG00000116791|Q08257-3|CRYZ 51.41523569358685 0.1097924807909074 3 [MT]RRCS{I|L}G{I|L}V 10 6 + 59.089 0.0 0.0 5.208 5.208 86.54 0.0 0.0 0.0 20.72559982972642 30.96787486224656 20.72559982972642 11.721675119240516 0 1.1989700043360187 1.5228787452803376 1.174742501084005 0.0 [MT]RRCS{I|L}G{I|L}V;[MT]RRA[MT]G{I|L}V;[MT]ARR[MT]G{I|L}V;[MT]RR{I|L}[CS]G{I|L}V;[VG]{M(Oxidation (M))|F}RR[MT]G{I|L}V;[MT]RRA{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[PS];[MT]RR{I|L}[C(Carbamidomethyl (C))S]{I|L}V;[MT]RRC{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V;[MT]ARR{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[PS];[MT]RRW{[CA]|SS}{I|L}V 5.208;4.1748;3.7543;3.4463;2.8066;2.2154;2.0555;2.0555;1.7949;1.7902 -;-;-;-;-;-;-;-;-;- 245 1 1.374 67737.2 1.0 6681 5403 12084 HBL1_DMSO_200M_050219_1,12086 HBL1_DMSO_200M_050219_1,12086,TMAKESSIIGV True True TMAKESSIIGV 62.146673 568.305346667767 32501798.0 12084.0 nc|ENSG00000116791|Q08257-2|CRYZ;;ENSG00000116791|ENST00000340866|CRYZ;;nc|ENSG00000116791|Q08257-3|CRYZ 7.753518263498942 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12087 62.148 12.0 5708600.0 25 0 2337600.0 -1 0 69 466.2658827676893 465.2586063010893 1 466.2659789919853 MULTI CID FTMS 0 0 0 12084 6161545.0 0.3661859858202696 2 -0.2343826293945312 3 3 R 1 -1 21.237 0.0 0.0 4.5646 0.0 0.0 291.14660481358777 0.0 291.14660481358777 0.0 5.268024924119672 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 R 4.5646 - 15 + 1 1.374 60720.9 1.0 6682 5403 12084 HBL1_DMSO_200M_050219_1,12087 HBL1_DMSO_200M_050219_1,12087, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12088 62.149 20.0 2338200.0 25 0 385050.0 + 40507 VITEKGISDL 10 65 537.8056314195719 1073.5967099059435 2 537.8058349490166 MULTI CID FTMS 0 0 0 12084 2859021.75 0.9623473118350148 -1 0.1436233520507812 4 Unmodified _VITEKGISDL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 27.128809495255545 0.3591624933674284 3 V{I|L}[{M(Oxidation (M))|F}V]S{I|L}GT 8 7 60.355 0.0 0.0 5.6217 0.0 0.0 0.0 254.11371790103752 254.11371790103752 31.938200260161125 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 V{I|L}[{M(Oxidation (M))|F}V]S{I|L}GT 5.6217 - 444 + 1 1.374 44471.5 1.0 6683 5403 12084 HBL1_DMSO_200M_050219_1,12088 HBL1_DMSO_200M_050219_1,12088,VITEKGISDL False True VITEKGISDL 62.149031 537.805834949017 52624144.0 12084.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 5.964849948883057 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12089 62.15 19.0 3362900.0 25 0 328340.0 + 24895 MPNTRPPII 9 80 519.791667430783 1037.568781928366 2 519.7922241091728 MULTI CID FTMS 0 0 0 12084 2845608.75 0.2616131144110726 -2 0.1737709045410156 5 Unmodified _MPNTRPPII_ ENSG00000084774|ENST00000264705|CAD 51.629811660486645 0.0367964933207742 3 MPNTR 5 4 76.128 0.0 0.0 7.3371 0.0 0.0 0.0 435.2617107876761 435.2617107876761 62.14841568716295 0.0 0.0 0.0 0 1.066901560044258 2.0 0.0 0.75 + MPNTR 7.3371 + + 59 + 1 1.374 55667.6 1.0 6684 5403 12084 HBL1_DMSO_200M_050219_1,12089 HBL1_DMSO_200M_050219_1,12089,MPNTRPPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12090 62.151 37.0 1921800.0 25 0 424990.0 + 22151 LPPSALQSV 9 85 456.26343039887297 910.512307864546 2 456.2634765505791 MULTI CID FTMS 0 0 0 12084 1142193.75 0.394772791842101 11 -0.8924026489257812 6 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 34.10243960390752 0.1078313939113124 3 {M(Oxidation (M))|F}G{I|L}AG{I|L}{M(Oxidation (M))|F} 7 8 38.537 0.0 0.0 4.2324 0.0 0.0 0.0 202.0919130914672 202.0919130914672 18.34842654039398 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}G{I|L}AG{I|L}{M(Oxidation (M))|F} 4.2324 - 289 + 1 1.374 60861.9 1.0 6685 5403 12084 HBL1_DMSO_200M_050219_1,12090 HBL1_DMSO_200M_050219_1,12090,LPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12091 62.153 63.0 850880.0 25 0 93432.0 -1 0 66 632.9777156296999 1895.9113174893 3 632.9783203005791 MULTI CID FTMS 0 0 0 12084 832371.1875 1.0 0 0.0 7 3 Y[{M(Oxidation (M))|F}V]{I|L}H{I|L}{[QS]|[NT]} 8 -1 28.659 0.0 0.0 1.5116 0.0 0.0 890.4136830060562 0.0 890.4136830060562 0.0 11.46713777483761 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 Y[{M(Oxidation (M))|F}V]{I|L}H{I|L}{[QS]|[NT]} 1.5116 - 71 1 1.374 47266.7 1.0 6686 5403 12084 HBL1_DMSO_200M_050219_1,12091 HBL1_DMSO_200M_050219_1,12091, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12092 62.154 48.0 1454800.0 25 0 227420.0 18751 LALSESVPR 9 98 486.28031070876347 970.546068484327 2 486.2794067263603 MULTI CID FTMS 0 0 0 12084 802785.5625 1.0 0 0.0 8 Unmodified _LALSESVPR_ ENST00000485781.5_1_2:63815955-63816111:+|nuORF 36.12702656103203 0.0967173616627612 3 {I|L}G{I|L}T{[ES]|[DT]|[{I|L}C]}V[RP] 9 2 + 69.459 0.0 0.0 7.1567 7.1567 84.943 0.0 0.0 0.0 33.09233086970755 3.9333014970278697 3.9333014970278697 3.4678748622465605 0 0.6549471895720984 2.0 0.0 0.8807196863200843 {I|L}G{I|L}T{[ES]|[DT]|[{I|L}C]}V[RP];{I|L}G{I|L}[WM]V[RP];{I|L}AVT{[ES]|[DT]|[{I|L}C]}V[RP];{I|L}G{I|L}T{[ES]|[DT]|[{I|L}C]}RPV;{I|L}G{I|L}[WM]RPV;{I|L}AVT{[ES]|[DT]|[{I|L}C]}RPV;{I|L}AV[WM]V[RP];{I|L}AV[WM]RPV;{I|L}AE{[WT]|[RM]}V[RP];{I|L}AEDVRR{I|L} 7.1567;6.7994;6.7604;6.7515;6.3942;6.3552;6.043;5.6377;5.5514;5.464 -;-;-;-;-;-;-;-;-;- 390 + 1 1.374 59908.9 1.0 6687 5403 12084 HBL1_DMSO_200M_050219_1,12092 HBL1_DMSO_200M_050219_1,12092,LALSESVPR True False IAEDVGRLV 62.154219 486.27940672636 5149591.0 12084.0 nc|ENSG00000089820|P98171-2|ARHGAP4;;ENST00000470979.1_1_X:153186583-153187260:-|nuORF;;ENST00000470209.5_1_X:153178504-153191656:-|nuORF;;ENSG00000089820|ENST00000350060|ARHGAP4;;ENST00000494302.5_1_X:153178504-153191656:-|nuORF 2.059774537881216 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12093 62.156 78.0 774940.0 25 0 81620.0 + 23578 LTNEETTDST 10 111 555.7433859513766 1109.472218969553 2 555.7440063357353 MULTI CID FTMS 0 0 0 12084 635400.4375 0.3872487364449323 2 -0.2343826293945312 9 Unmodified _LTNEETTDST_ ENSG00000111802|ENST00000378198|TDP2;ENST00000478285.1_1_6:24654627-24658985:-|nuORF;nc|ENSG00000111802|O95551-2|TDP2 39.94969957227396 0.1580982266129622 3 {[QS]|[NT]}{I|L}EE{M(Oxidation (M))|F} 6 7 31.399 0.0 0.0 2.83 0.0 0.0 0.0 373.1034805264469 373.1034805264469 1.043940784708024 0.0 0.0 0.0 0 0.2742275032520141 0.8860566476931632 1.3684151806525389 0.9957416651753048 {[QS]|[NT]}{I|L}EE{M(Oxidation (M))|F} 2.83 - 821 1 1.374 52933.8 1.0 6688 5403 12084 HBL1_DMSO_200M_050219_1,12093 HBL1_DMSO_200M_050219_1,12093,LTNEETTDST False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12094 62.158 63.0 860790.0 25 0 84300.0 + 35389 STFGELKTV 9 89 491.2660125965695 980.5174722599388 2 491.2659789919853 MULTI CID FTMS 0 0 0 12084 582164.0625 1.0 0 0.0 10 Unmodified _STFGELKTV_ ENSG00000122965|ENST00000261741|RBM19 43.77239144664712 0.0547478964384323 3 {[MG]|[TS]}{M(Oxidation (M))|F}GE{I|L}KTV 9 0 + 37.008 0.0 0.0 3.7744 3.7744 74.414 0.0 0.0 0.0 7.147642715192507 3.5654732351381213 3.5654732351381213 3.4678748622465605 0 0.4247425010840047 0.0 0.4793036574208875 0.0 + + {[MG]|[TS]}{M(Oxidation (M))|F}GE{I|L}KTV;{[MG]|[TS]}{M(Oxidation (M))|F}W{I|L}KTV;{[MG]|[TS]}{M(Oxidation (M))|F}GE{I|L}KS{I|L};{[MG]|[TS]}{M(Oxidation (M))|F}W{I|L}KS{I|L};{[MG]|[TS]}{M(Oxidation (M))|F}GE{I|L}SK{I|L};{[MG]|[TS]}{M(Oxidation (M))|F}W{I|L}SK{I|L};{[QN]|[E{I|L}]|[KN]}GKT{M(Oxidation (M))|F}WT;{[MG]|[TS]}{M(Oxidation (M))|F}R[{I|L}A]WT 3.7744;3.4207;3.4107;3.0571;2.9401;2.5864;0.63363;0.37527 +;-;-;-;-;-;-;- + 211 + 1 1.374 47980.8 1.0 6689 5403 12084 HBL1_DMSO_200M_050219_1,12094 HBL1_DMSO_200M_050219_1,12094,STFGELKTV True True STFGELKTV 62.157548 491.265978991985 4296596.0 12084.0 ENSG00000122965|ENST00000261741|RBM19 5.796647866566976 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12095 62.16 91.0 795210.0 25 0 65560.0 + + 776 LPFSQPKV 8 110 458.69192999711714 0 458.6916992068291 PEAK CID FTMS 0 0 0 12084 502592.15625 1.0 0 0.0 11 Unmodified _AESDPHFN_ nc|ENSG00000213689|Q9NSU2-1|TREX1;ENSG00000213689|ENST00000625293|TREX1;nc|ENSG00000213689|Q9NSU2-2|TREX1 5.760428011301431 0.5786759180849727 3 P{M(Oxidation (M))|F}V[EP]T 6 -1 16.036 0.0 0.0 1.7518 0.0 0.0 113.93072834474908 128.07212244205314 242.00285078680224 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 P{M(Oxidation (M))|F}V[EP]T 1.7518 - 97 + 1 1.374 60349.2 1.0 6690 5403 12084 HBL1_DMSO_200M_050219_1,12095 HBL1_DMSO_200M_050219_1,12095,AESDPHFN False False LPFSQPKV 62.159552 458.691699206829 12255864.0 12084.0 nc|ENSG00000213689|Q9NSU2-1|TREX1;;ENSG00000213689|ENST00000625293|TREX1;;nc|ENSG00000213689|Q9NSU2-2|TREX1 2.313215732574463 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12096 62.162 109.0 216720.0 25 0 15403.0 + 45815 YYNYNWYWF 9 60 709.7926833553425 1417.570813777485 2 709.7935058474541 MULTI CID FTMS 0 0 0 12084 368741.96875 0.3211383819781488 1 -0.101531982421875 12 Unmodified _YYNYNWYWF_ REV__ENSG00000106392|ENST00000436587|C1GALT1;REV__nc|ENSG00000106392|Q9NS00-2|C1GALT1 2.059750862983233 0.8427793054688888 3 Y 1 -1 5.4846 0.0 0.0 0.3869 0.0 0.0 1119.438441806585 132.04584680728752 1251.4842886138724 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.3869 + + 5 + 1 1.374 22267.3 1.0 6691 5403 12084 HBL1_DMSO_200M_050219_1,12096 HBL1_DMSO_200M_050219_1,12096,YYNYNWYWF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12097 62.171 514.0 341960.0 25 0 28209.0 + 9664 FLPSHSLDTV 10 153 558.2904313907546 1114.5663098483092 2 558.2897216677666 MULTI CID FTMS 0 0 0 12084 338466.40625 1.0 0 0.0 13 Unmodified _FLPSHSLDTV_ ENSG00000172046|ENST00000417901|USP19;nc|ENSG00000172046|O94966-3|USP19;nc|ENSG00000172046|O94966-4|USP19;nc|ENSG00000172046|O94966-5|USP19;nc|ENSG00000172046|O94966-7|USP19;nc|ENSG00000172046|O94966|USP19 52.268347100219714 0.0668375294751462 3 VTD{I|L}[CS]TV 8 7 53.062 0.0 0.0 4.7608 0.0 0.0 278.16456774232216 0.0 278.16456774232216 0.0 24.627954340869977 0.0 0.0 0 0.805462187404089 0.0 2.217900182820548 0.0 VTD{I|L}[CS]TV 4.7608 - 1811 + 1 1.374 137342.2 1.0 6692 5403 12084 HBL1_DMSO_200M_050219_1,12097 HBL1_DMSO_200M_050219_1,12097,FLPSHSLDTV True True FLPSHSLDTV 62.170935 558.289721667767 3342684.25 12084.0 nc|ENSG00000172046|O94966-7|USP19;;nc|ENSG00000172046|O94966-3|USP19;;nc|ENSG00000172046|O94966-5|USP19;;ENSG00000172046|ENST00000417901|USP19;;nc|ENSG00000172046|O94966-4|USP19;;nc|ENSG00000172046|O94966|USP19 5.064985593159993 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12098 62.175 242.0 323020.0 25 0 32459.0 27848 PLRENREMS 9 120 377.8557514639757 1130.5454249921272 3 377.8560974001884 MULTI CID FTMS 0 0 0 12084 274694.1875 0.8332534541733133 -2 0.1737709045410156 14 Unmodified _PLRENREMS_ ENSG00000135451|ENST00000257909|TROAP;ENST00000546735.5_1_12:49717501-49723306:+|nuORF;ENST00000551192.5_1_12:49719304-49723306:+|nuORF 10.823927491677226 0.5436922275383211 3 [DP]{I|L}R 4 7 24.922 0.0 0.0 2.2044 0.0 0.0 0.0 646.2586567638647 646.2586567638647 11.78202273601765 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 [DP]{I|L}R 2.2044 - 278 1 1.374 69950.0 1.0 6693 5403 12084 HBL1_DMSO_200M_050219_1,12098 HBL1_DMSO_200M_050219_1,12098,PLRENREMS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12099 62.179 211.0 347560.0 25 0 23842.0 + 24238 MAPKAWTV 8 125 452.24099215740273 902.4674313816056 2 452.2408935427666 MULTI CID FTMS 0 0 0 12084 272336.5625 0.4308038572175021 2 -0.2343826293945312 15 Unmodified _MAPKAWTV_ ENSG00000138801|ENST00000265174|PAPSS1 20.453626601364224 0.6087503291685402 3 MAP 3 5 48.06 0.0 0.0 5.3254 0.0 0.0 0.0 600.3143404596311 600.3143404596311 23.829539872413147 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + MAP 5.3254 + + 254 + 1 1.374 62638.0 1.0 6694 5403 12084 HBL1_DMSO_200M_050219_1,12099 HBL1_DMSO_200M_050219_1,12099,MAPKAWTV False True MAPKAWTV 62.179448 452.240893542767 9188689.0 12084.0 ENSG00000138801|ENST00000265174|PAPSS1 4.026449998219808 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12100 62.191 651.0 132500.0 25 0 10873.0 -1 0 108 688.2918010384083 2061.853573715425 3 688.2916137576103 MULTI CID FTMS 0 0 0 12084 208453.546875 0.9532562412755902 -1 0.1436233520507812 16 3 EDY[NS]YCCE{I|L}AH{[NV]|[RG]} 14 -1 42.687 0.0 0.0 2.0703 0.0 0.0 403.1982422509257 0.0 403.1982422509257 0.0 14.81198504869997 0.0 0.0 0 0.0 0.0 0.0 1.0994850021680094 EDY[NS]YCCE{I|L}AH{[NV]|[RG]} 2.0703 - 792 + 1 1.374 88549.9 1.0 6695 5403 12084 HBL1_DMSO_200M_050219_1,12100 HBL1_DMSO_200M_050219_1,12100, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12101 62.203 683.0 306520.0 25 0 32571.0 40639 VLDLHDNQL 9 205 533.7795328424075 1065.544512751615 2 533.7784911990166 MULTI CID FTMS 0 0 0 12084 177239.9375 1.0 0 0.0 17 Unmodified _VLDLHDNQL_ ENSG00000148356|ENST00000300417|LRSAM1;nc|ENSG00000148356|Q6UWE0-2|LRSAM1 56.17704186161178 0.0281986971544335 3 [{I|L}V]STGPPA 8 7 61.79 0.0 0.0 5.7989 0.0 0.0 0.0 340.1268244849119 340.1268244849119 32.15163526611629 0.0 0.0 0.0 0 0.6307196863200843 2.0 1.0356668758921828 0.0 [{I|L}V]STGPPA 5.7989 - 13444 1 1.374 170560.0 1.0 6696 5403 12084 HBL1_DMSO_200M_050219_1,12101 HBL1_DMSO_200M_050219_1,12101,VLDLHDNQL True True VIPKEVTPAL 62.202692 533.778491199017 2289774.5 12084.0 ENST00000402902.1_1_6:66803326-66803860:-|nuORF;;ENSG00000083635|ENST00000379161|NUFIP1 4.387631972630818 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12102 62.214 675.0 208870.0 25 0 20292.0 + -1 TFDGAQCMFSP 11 166 610.2413546925573 1218.4681564519144 2 610.2422973513603 MULTI CID FTMS 0 0 0 12084 179179.296875 0.7703456678029807 -1 0.1436233520507812 18 Oxidation (M) _TFDGAQCM(Oxidation (M))FSP_ REV__ENSG00000108179|ENST00000225174|PPIF;REV__nc|ENSG00000108179|P30405-2|PPIF 20.41453444215458 0.6105011870913812 3 DE 2 -1 18.672 0.0 0.0 1.5324 0.0 0.0 855.324187801327 116.05098138980702 971.375169191134 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.7302046884880937 0.0 DE 1.5324 - 667 + 1 1.374 104088.3 1.0 6697 5403 12084 HBL1_DMSO_200M_050219_1,12102 HBL1_DMSO_200M_050219_1,12102,TFDGAQCMFSP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12103 62.228 800.0 280330.0 25 0 29404.0 + -1 ALEKMSGP 8 178 424.7131529342074 847.411752935215 2 424.7130004763603 MULTI CID FTMS 0 0 0 12084 155916.375 1.0 0 0.0 19 Oxidation (M) _ALEKM(Oxidation (M))SGP_ REV__ENST00000422847.1_1_10:81978568-81978796:+|nuORF 26.88365393820708 0.4786498634179528 3 AT 2 -1 24.024 0.0 0.0 2.835 0.0 0.0 0.0 672.3041685396062 672.3041685396062 11.438089922165222 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 AT 2.835 - 169 + 1 1.374 172385.7 0.8999999761581421 6698 5403 12084 HBL1_DMSO_200M_050219_1,12103 HBL1_DMSO_200M_050219_1,12103,ALEKMSGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12104 62.242 683.0 203540.0 25 0 23141.0 -1 LEMCSHFDA 9 149 563.223443669627 0 563.2231933474541 PEAK CID FTMS 0 0 0 12084 153808.546875 1.0 0 0.0 20 Carbamidomethyl (C),Oxidation (M) _LEM(Oxidation (M))C(Carbamidomethyl (C))SHFDA_ ENSG00000221823|ENST00000234310|PPP3R1 15.847184025352805 0.2451986057151378 3 E{M(Oxidation (M))|F} 2 -1 15.261 0.0 0.0 1.3572 0.0 0.0 113.08197511865416 732.2294054751965 845.3113805938507 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.0 E{M(Oxidation (M))|F} 1.3572 + + 62 + 1 1.374 109411.5 1.0 6699 5403 12084 HBL1_DMSO_200M_050219_1,12104 HBL1_DMSO_200M_050219_1,12104,LEMCSHFDA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12106 62.255 666.0 168040.0 25 0 18257.0 + -1 MVEQPLSQ 8 104 947.4504280159244 946.4431515493244 1 949.4639770388604 MULTI CID FTMS 0 0 0 12105 120043.5625 0.5538270918957354 4 -0.392730712890625 1 Oxidation (M) _M(Oxidation (M))VEQPLSQ_ REV__ENSG00000120800|ENST00000261637|UTP20 6.723162845929126 0.7835230281555235 3 [NP]AA 4 -1 10.265 0.0 0.0 1.0846 0.0 0.0 0.0 590.2485158894212 590.2485158894212 2.817751963712423 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 [NP]AA 1.0846 - 135 1 1.374 77741.6 1.0 6700 5404 12105 HBL1_DMSO_200M_050219_1,12106 HBL1_DMSO_200M_050219_1,12106,MVEQPLSQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12107 62.257 72.0 1664600.0 25 0 137760.0 + 3430 AYYVSNEEL 9 119 544.2503858150325 1086.4862186968649 2 544.2512695193291 MULTI CID FTMS 0 0 0 12105 1020440.0625 0.8352001794906003 -1 0.101531982421875 2 Unmodified _AYYVSNEEL_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 21.74664581756881 0.2544899275067181 3 [NS]EVYS{M(Oxidation (M))|F}E{I|L} 9 6 + 33.743 0.0 0.0 3.1057 3.1057 69.773 0.0 0.0 0.0 1.6687018715656734 2.0600641464225973 1.6687018715656734 1.6687018715656734 0 0.2742275032520141 0.0 0.1747425010840047 0.5941876774005249 [NS]EVYS{M(Oxidation (M))|F}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PS{M(Oxidation (M))|F}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[MT]NV{M(Oxidation (M))|F}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}SVYS{M(Oxidation (M))|F}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[MT]GGV{M(Oxidation (M))|F}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}SP{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}C{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VN[MT]C{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VN[WD]{M(Oxidation (M))|F};[NS][HQ]NV{M(Oxidation (M))|F}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VGG[MT]C{I|L} 3.1057;2.9521;2.8904;2.6181;2.0429;1.8685;1.8068;1.2106;1.1299;0.95933 -;-;-;-;-;-;-;-;-;- 411 1 1.374 95021.3 1.0 6701 5404 12105 HBL1_DMSO_200M_050219_1,12107 HBL1_DMSO_200M_050219_1,12107,AYYVSNEEL False True AYYVSNEEL 62.257014 544.251269519329 10212591.0 12105.0 ENSG00000254772|ENST00000329251|EEF1G;;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;;nc|ENSG00000254772|P26641-2|EEF1G 2.902613639831543 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12108 62.258 32.0 2000400.0 25 0 168260.0 + 1879 ALVVQVAEA 9 85 450.2627244928356 898.5108960524713 2 450.2626220583916 MULTI CID FTMS 0 0 0 12105 942017.0 0.5076195785930934 -1 0.101531982421875 3 Unmodified _ALVVQVAEA_ ENSG00000049860|ENST00000261416|HEXB;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENST00000515528.1_1_5:73981085-73985366:+|nuORF 46.92087301778293 0.0471210510596396 3 [{I|L}A]VVQV[RD] 8 3 + 45.099 0.0 0.0 5.0193 5.0193 75.327 0.0 0.0 0.0 11.303337684950066 6.989700043360188 6.989700043360188 1.7609125905568137 0 0.0 1.6989700043360187 0.0 0.3494850021680094 [{I|L}A]VVQV[RD];[{I|L}A]VN{I|L}V[RD];[{I|L}A]VQVV[RD];[{I|L}A]NV{I|L}V[RD];[{I|L}A]VVN{I|L}[RD];[{I|L}A]VAGVV[RD];[{I|L}A]N{I|L}VV[RD];{[QV]|[N{I|L}]|[RA]|[KV]}VA{I|L}V[RD];{[VA]|[{I|L}G]}{I|L}VQV[RD];[{I|L}A]VNV{I|L}[RD] 5.0193;4.8233;4.2923;4.2923;3.8524;3.8464;3.7613;3.7613;3.7104;3.6564 -;-;-;-;-;-;-;-;-;- 784 1 1.374 55212.8 1.0 6702 5404 12105 HBL1_DMSO_200M_050219_1,12108 HBL1_DMSO_200M_050219_1,12108,ALVVQVAEA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12109 62.26 50.0 678880.0 25 0 61230.0 + 2311 AQIGSYVHV 9 70 487.2589136786344 972.5032744240688 2 487.2592651247978 MULTI CID FTMS 0 0 0 12105 539098.75 0.0157835661397658 6 -0.5418434143066406 4 Unmodified _AQIGSYVHV_ ENSG00000166847|ENST00000300087|DCTN5;ENST00000566053.5_1_16:23652819-23678462:+|nuORF;nc|ENSG00000166847|Q9BTE1-2|DCTN5 23.1484247019978 0.2366544122328345 3 [QA]Y 3 6 15.814 0.0 0.0 1.6261 0.0 0.0 0.0 607.3207847602594 607.3207847602594 2.169081132677702 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 [QA]Y 1.6261 - 78 1 1.374 32897.3 1.0 6703 5404 12105 HBL1_DMSO_200M_050219_1,12109 HBL1_DMSO_200M_050219_1,12109,AQIGSYVHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12110 62.262 125.0 824250.0 25 0 121560.0 27216 PGLAARER 8 126 435.2511139900161 868.4876750468321 2 435.2509338259697 MULTI CID FTMS 0 0 0 12105 533387.0625 0.4625464039971257 12 -0.9783554077148438 5 Unmodified _PGLAARER_ ENST00000570099.5_1_16:30103880-30104012:-|nuORF 3.5964929083625545 0.8025018637788065 3 AA 2 6 8.5835 0.0 0.0 0.98833 0.0 0.0 267.1549856931196 456.2374361627563 723.3924218558759 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + AA 0.98833 + + 58 + 1 1.374 87215.1 1.0 6704 5404 12105 HBL1_DMSO_200M_050219_1,12110 HBL1_DMSO_200M_050219_1,12110,PGLAARER False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12111 62.265 155.0 772880.0 25 0 76042.0 -1 IPLTRCSV 8 119 473.2632815757394 944.5120102182788 2 473.2630187869072 MULTI CID FTMS 0 0 0 12105 392775.3125 0.9263536601841076 -1 0.101531982421875 6 Carbamidomethyl (C) _IPLTRC(Carbamidomethyl (C))SV_ ENST00000541264.2_2_14:59108324-59108435:+|nuORF 36.04419817259434 0.3004715606373109 3 {I|L}P{I|L} 3 -1 50.49 0.0 0.0 5.3456 0.0 0.0 0.0 618.2682764595967 618.2682764595967 33.1993094474233 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 {I|L}P{I|L} 5.3456 + + 380 + 1 1.374 94169.4 1.0 6705 5404 12105 HBL1_DMSO_200M_050219_1,12111 HBL1_DMSO_200M_050219_1,12111,IPLTRCSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12112 62.268 119.0 692480.0 25 0 78942.0 + 5714 DPLHCFVSIT 10 113 566.2799586055452 1130.5453642778905 2 566.2811157107353 MULTI CID FTMS 0 0 0 12105 323244.0 0.429307397771146 -1 0.101531982421875 7 Unmodified _DPLHCFVSIT_ REV__ENSG00000183914|ENST00000572933|DNAH2;REV__nc|ENSG00000183914|Q9P225-2|DNAH2 17.11289562659939 0.5604042439455784 3 [DP]{I|L}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}KV 9 -1 44.096 0.0 0.0 3.9004 0.0 0.0 0.0 110.95486403311295 110.95486403311295 19.35895234555808 0.0 0.0 0.0 0 0.7742275032520141 1.5228787452803376 0.7302046884880937 0.0 [DP]{I|L}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}KV 3.9004 - 515 1 1.374 66190.9 1.0 6706 5404 12105 HBL1_DMSO_200M_050219_1,12112 HBL1_DMSO_200M_050219_1,12112,DPLHCFVSIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12113 62.277 539.0 397350.0 25 0 29632.0 + 24846 MPLQTGTAQI 10 230 530.2786191662964 1058.542685399393 2 530.2794677615166 MULTI CID FTMS 0 0 0 12105 267490.34375 1.0 0 0.0 8 Unmodified _MPLQTGTAQI_ ENSG00000064393|ENST00000406875|HIPK2;nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2 45.739877483867886 0.1051543674217965 3 [AG]{I|L}PMTGTAQ{I|L} 11 4 + 47.93 0.0 0.0 4.5279 4.5279 73.879 0.0 0.0 0.0 1.8014364267158314 5.595431918426833 1.8014364267158314 1.8014364267158314 0 0.0 1.3010299956639813 1.325257498915995 0.0 [AG]{I|L}PMTGTAQ{I|L};[Q{I|L}]PMTGTAQ{I|L};[AG]{I|L}PTMGTAQ{I|L};[{I|L}P]QMTGTAQ{I|L};[Q{I|L}]PTMGTAQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ATP{[QS]|[NT]}PS{I|L};[{I|L}P]QTMGTAQ{I|L};[AG]{I|L}PT{[SA]|[TG]}MAQ{I|L};[AG]VNQTGTAQ{I|L};[{I|L}P]MQTGTAQ{I|L} 4.5279;4.3577;4.3025;4.2178;4.1323;3.9993;3.9924;3.8771;3.8076;3.7671 -;-;-;-;-;-;-;-;-;- 8799 1 1.374 163899.8 1.0 6707 5404 12105 HBL1_DMSO_200M_050219_1,12113 HBL1_DMSO_200M_050219_1,12113,MPLQTGTAQI True True MPLQTGTAQI 62.277083 530.279467761517 2129520.0 12105.0 nc|ENSG00000064393|Q9H2X6-3|HIPK2;;nc|ENSG00000064393|Q9H2X6-2|HIPK2;;ENSG00000064393|ENST00000406875|HIPK2 4.291119496027629 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12114 62.281 231.0 643800.0 25 0 104300.0 + 22174 LPPWSCTI 8 149 458.73158390095097 915.448614868702 2 458.7322265505791 MULTI CID FTMS 0 0 0 12105 195577.828125 0.6113746332821192 1 -0.1328506469726562 9 Unmodified _LPPWSCTI_ ENST00000556036.5_2_14:45605535-45605673:+|nuORF 20.871210003555333 0.6025813472596342 3 [{I|L}T]H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AT{I|L} 8 5 [{I|L}T]H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A + + 21.592 5.0601 0.74053 2.3587 2.3587 49.228 0.0 0.0 0.0 0.0 -1.8099916887217589 -1.8099916887217589 0.0 0 0.4247425010840047 0.0 0.2396518287104437 0.0 [{I|L}T]H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AT{I|L} 2.3587 - 404 + 1 1.374 118535.8 1.0 6708 5404 12105 HBL1_DMSO_200M_050219_1,12114 HBL1_DMSO_200M_050219_1,12114,LPPWSCTI False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12115 62.292 622.0 460840.0 25 0 31190.0 + 44329 YLPPATQVV 9 246 494.2792946154327 986.5440362976656 2 494.2792846560478 MULTI CID FTMS 0 0 0 12105 193061.15625 0.5498208530933067 -2 0.2451553344726562 10 Unmodified _YLPPATQVV_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 36.04419817259434 0.0971720506436186 3 TQY{I|L}VV 6 7 32.193 0.0 0.0 3.2632 0.0 0.0 265.1428530235302 0.0 265.1428530235302 0.0 10.371326595298736 0.0 0.0 0 1.0074908058443608 0.0 1.1861818737241734 0.2887254899964357 TQY{I|L}VV 3.2632 - 2100 1 1.374 215902.5 1.0 6709 5404 12105 HBL1_DMSO_200M_050219_1,12115 HBL1_DMSO_200M_050219_1,12115,YLPPATQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12116 62.294 58.0 1494500.0 25 0 164480.0 + 22212 LPQVGPSVPV 10 116 496.7924844808842 991.5704160285684 2 496.7928954958916 MULTI CID FTMS 0 0 0 12105 182123.71875 0.0252503764880149 26 -1.8264579772949217 11 Unmodified _LPQVGPSVPV_ REV__ENSG00000204842|ENST00000673436|ATXN2;REV__ENST00000495342.1_1_12:111907876-111923612:-|nuORF;REV__ENST00000552323.1_1_12:111923039-111924609:-|nuORF;REV__nc|ENSG00000204842|Q99700-4|ATXN2;REV__nc|ENSG00000204842|Q99700-5|ATXN2;REV__nc|ENSG00000204842|Q99700|ATXN2 14.838274106304384 0.5985701837916485 3 [{I|L}P]D{I|L}DPT 7 -1 24.702 0.0 0.0 2.4912 0.0 0.0 0.0 237.16032834646413 237.16032834646413 6.247614622476686 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P]D{I|L}DPT 2.4912 - 1005 1 1.374 73559.5 1.0 6710 5404 12105 HBL1_DMSO_200M_050219_1,12116 HBL1_DMSO_200M_050219_1,12116,LPQVGPSVPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12117 62.305 630.0 241710.0 25 0 17259.0 -1 0 136 603.9675200152114 1808.8807306458343 3 603.9693481326103 MULTI CID FTMS 0 0 0 12105 142346.796875 0.0311054158347938 -19 1.5385513305664062 12 3 [H{I|L}][NP]YT{I|L}C(Carbamidomethyl (C)){[WS]|[C(Carbamidomethyl (C)){I|L}]}M{M(Oxidation (M))|F}{I|L}K 14 -1 + 67.679 0.0 0.0 3.7415 3.7415 71.61 0.0 0.0 0.0 1.779706183871383 1.779706183871383 1.779706183871383 1.779706183871383 0 0.8494850021680094 1.6989700043360187 0.3807196863200844 0.3807196863200844 [H{I|L}][NP]YT{I|L}C(Carbamidomethyl (C)){[WS]|[C(Carbamidomethyl (C)){I|L}]}M{M(Oxidation (M))|F}{I|L}K;[{I|L}P]NNVST{I|L}C(Carbamidomethyl (C))[WD]{I|L}H{I|L}Q;[H{I|L}]{[MG]|[TS]}WT{I|L}C(Carbamidomethyl (C))[WD]{I|L}H{I|L}K;[H{I|L}]{[MG]|[TS]}WT{I|L}W[C(Carbamidomethyl (C))D]{I|L}H{I|L}K;[H{I|L}][NP]YT{I|L}W[C(Carbamidomethyl (C))S]M{M(Oxidation (M))|F}{I|L}K;[{I|L}P]NHYT{I|L}C(Carbamidomethyl (C)){[WS]|[C(Carbamidomethyl (C)){I|L}]}M{M(Oxidation (M))|F}{I|L}K;[{I|L}P]NHYT{I|L}{[DA]|[EG]}[C(Carbamidomethyl (C))D]{I|L}H{I|L}K;[{I|L}P]NNVST{I|L}W[C(Carbamidomethyl (C))D]{I|L}H{I|L}Q;[{I|L}P]NH{I|L}N[HC][HS]{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}]{[MG]|[TS]}WT{I|L}W[C(Carbamidomethyl (C))S]M{M(Oxidation (M))|F}{I|L}K 3.7415;3.6431;3.5998;3.5998;3.531;3.5084;3.4767;3.4326;3.4076;3.311 -;-;-;-;-;-;-;-;-;- 5670 1 1.374 117289.4 1.0 6711 5404 12105 HBL1_DMSO_200M_050219_1,12117 HBL1_DMSO_200M_050219_1,12117, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12118 62.319 728.0 120660.0 25 0 30194.0 + 34943 SQITYVTGV 9 90 967.5096587200352 966.502382253435 1 967.3727905154228 MULTI CID FTMS 0 0 0 -1 0 13 Unmodified _SQITYVTGV_ ENSG00000166478|ENST00000396602|ZNF143;nc|ENSG00000166478|P52747-2|ZNF143;nc|ENSG00000166478|P52747-3|ZNF143 41.95555342248728 0.0647214845423414 3 [YQ]{I|L}STVTR 8 5 + 42.55 0.0 0.0 4.4025 4.4025 78.737 0.0 0.0 0.0 5.707800775895322 9.262137858390815 5.707800775895322 5.707800775895322 0 0.535666875892183 1.154901959985743 1.110924374808178 0.5941876774005248 [YQ]{I|L}STVTR;{[DS]|[MA]|[CV]|TT}{[QV]|[N{I|L}]|[RA]|[KV]}YVTR;{[QS]|[NT]}{I|L}TYVTR;[YQ]{I|L}{[WT]|[RM]}TR;{[DS]|[MA]|[CV]|TT}Y{[QV]|[N{I|L}]|[RA]|[KV]}VTR;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VYT[VP]N;[QP][PA][QA]VTR;{[DS]|[MA]|[CV]|TT}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[YQ][HK][HV]R;{[DS]|[MA]|[CV]|TT}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}VG{[MS]|[{M(Oxidation (M))|F}A]} 4.4025;3.812;3.812;3.808;3.4325;2.2831;1.3011;1.207;1.172;1.1541 -;-;-;-;-;-;-;-;-;- 1022 1 1.374 66255.7 1.0 6712 5404 12105 HBL1_DMSO_200M_050219_1,12118 HBL1_DMSO_200M_050219_1,12118,SQITYVTGV True True SQITYVTGV 62.318545 967.372790515423 749173.1875 12105.0 nc|ENSG00000166478|P52747-3|ZNF143;;nc|ENSG00000166478|P52747-2|ZNF143;;ENSG00000166478|ENST00000396602|ZNF143 3.0797642866770425 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12119 62.332 798.0 112710.0 25 0 9193.4 + 44018 YIFVQLFDRIH 11 121 725.8948304060747 1449.7751078789493 2 726.3964721560478 MULTI CID FTMS 0 0 0 12105 127900.84375 1.0 0 0.0 14 Unmodified _YIFVQLFDRIH_ REV__ENSG00000122728|ENST00000242310|TAF1L;REV__ENSG00000147133|ENST00000423759|TAF1;REV__ENST00000478305.1_1_X:70607173-70609539:+|nuORF;REV__nc|ENSG00000147133|P21675-1|TAF1;REV__nc|ENSG00000147133|P21675-13|TAF1;REV__nc|ENSG00000147133|P21675-15|TAF1;REV__nc|ENSG00000147133|P21675-16|TAF1;REV__nc|ENSG00000147133|P21675-17|TAF1;REV__nc|ENSG00000147133|P21675-18|TAF1;REV__nc|ENSG00000147133|P21675-19|TAF1;REV__nc|ENSG00000147133|P21675-20|TAF1;REV__nc|ENSG00000147133|P21675-21|TAF1;REV__nc|ENSG00000147133|P21675-22|TAF1;REV__nc|ENSG00000147133|P21675-23|TAF1;REV__nc|ENSG00000147133|P21675-24|TAF1;REV__nc|ENSG00000147133|P21675-25|TAF1;REV__nc|ENSG00000147133|P21675|TAF1 3.5964929083625545 0.858179447565866 3 PYKV 4 -1 21.938 0.0 0.0 1.5132 0.0 0.0 413.1636845479525 546.305508834738 959.4691933826904 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PYKV 1.5132 - 345 + 1 1.374 65034.8 1.0 6713 5404 12105 HBL1_DMSO_200M_050219_1,12119 HBL1_DMSO_200M_050219_1,12119,YIFVQLFDRIH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12120 62.346 800.0 146730.0 25 0 9758.0 + -1 PCCSRFEMQVP 11 143 705.8041869997978 0 705.8041869997978 PEAK CID FTMS 0 0 0 -1 0 15 2 Carbamidomethyl (C) _PC(Carbamidomethyl (C))C(Carbamidomethyl (C))SRFEMQVP_ REV__nc|ENSG00000197168|Q6P3R8|NEK5 9.38312468134398 0.4559597037863106 3 E[C(Carbamidomethyl (C))C]S{I|L}AG 7 -1 16.872 0.0 0.0 1.1969 0.0 0.0 429.2383030865547 257.06000696353755 686.2983100500923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 E[C(Carbamidomethyl (C))C]S{I|L}AG 1.1969 - 280 + 1 1.374 85439.2 0.9900000095367432 6714 5404 12105 HBL1_DMSO_200M_050219_1,12120 HBL1_DMSO_200M_050219_1,12120,PCCSRFEMQVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12121 62.361 800.0 103020.0 25 0 6926.1 + 16563 KDAIRQNEKEL 11 114 672.3666639579758 0 672.2867919802666 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _KDAIRQNEKEL_ REV__ENSG00000162869|ENST00000294952|PPP1R21;REV__nc|ENSG00000162869|Q6ZMI0-2|PPP1R21;REV__nc|ENSG00000162869|Q6ZMI0-5|PPP1R21 11.494710602746466 0.4364593389169961 3 {I|L}TA 3 -1 10.718 0.0 0.0 0.79826 0.0 0.0 788.3752213712265 266.15143762760005 1054.5266589988266 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}TA 0.79826 - 86 + 1 1.374 70682.2 0.9900000095367432 6715 5404 12105 HBL1_DMSO_200M_050219_1,12121 HBL1_DMSO_200M_050219_1,12121,KDAIRQNEKEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12122 62.375 771.0 264980.0 25 0 17372.0 + 45713 YYFAQQNSGHF 11 156 681.298268549761 0 681.2985107302666 PEAK CID FTMS 0 0 0 12105 100388.984375 0.8970144915233886 -1 0.101531982421875 17 Unmodified _YYFAQQNSGHF_ ENSG00000137265|ENST00000380956|IRF4;ENST00000493114.1_1_6:406896-407595:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 59.36838082759317 0.0167257282916001 3 Y{M(Oxidation (M))|F}AQ[HT]TY 8 7 40.259 0.0 0.0 2.9589 0.0 0.0 163.0572782110469 183.0412996881469 346.09857789919386 0.0 0.0 0.0 0.0 0 0.6549471895720985 0.0 1.6237125054200234 0.9247425010840048 Y{M(Oxidation (M))|F}AQ[HT]TY 2.9589 - 531 + 1 1.374 145144.4 1.0 6716 5404 12105 HBL1_DMSO_200M_050219_1,12122 HBL1_DMSO_200M_050219_1,12122,YYFAQQNSGHF True True YYFAQQNSGHF 62.374545 681.298510730267 1144850.875 12105.0 nc|ENSG00000137265|Q15306-2|IRF4;;ENSG00000137265|ENST00000380956|IRF4;;ENST00000493114.1_1_6:406896-407595:+|nuORF 3.656028310457865 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12124 62.379 3.5 12917000.0 25 0 831160.0 + 5893 DPYKVYRIV 9 76 384.8851537633373 1151.633631890212 3 384.8853637576103 MULTI CID FTMS 0 0 0 12123 11824933.0 0.5653391360804111 2 -0.1705894470214843 1 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 37.97399986684836 0.0865783450051559 3 DPYKVY[R{I|L}]V 9 0 + 71.476 0.0 0.0 6.2065 6.2065 92.966 0.0 0.0 0.0 59.48638135581298 3.4678748622465605 3.4678748622465605 71.47608139917317 0 0.2614393726401688 1.6989700043360187 0.0 0.4247425010840047 + + DPYKVY[R{I|L}]V 6.2065 + + 61 + 1 1.372 43527.5 1.0 6717 5405 12123 HBL1_DMSO_200M_050219_1,12124 HBL1_DMSO_200M_050219_1,12124,DPYKVYRIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12125 62.38 6.3 7819400.0 25 0 940110.0 + 3901 DALDVANKI 9 76 479.7637889425701 957.51302495194 2 479.7640869021416 MULTI CID FTMS 0 0 0 12123 5825372.5 0.2611242344730442 2 -0.1705894470214843 2 Unmodified _DALDVANKI_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;ENST00000491601.1_1_17:38595721-38595772:-|nuORF 81.89019881105858 0.0170587746866453 3 {[DA]|[EG]}{I|L}DVANK{I|L} 9 0 + 92.273 0.0 0.0 9.6367 9.6367 94.871 0.0 0.0 0.0 62.052042582105386 11.478174818886371 11.478174818886371 9.208187539523747 0 1.2302046884880935 2.0 0.3807196863200844 1.1549471895720984 + + {[DA]|[EG]}{I|L}DVANK{I|L};{[DA]|[EG]}{I|L}DVAGGK{I|L} 9.6367;8.6751 +;- + 256 + 1 1.372 44412.8 1.0 6718 5405 12123 HBL1_DMSO_200M_050219_1,12125 HBL1_DMSO_200M_050219_1,12125,DALDVANKI True True DALDVANKI 62.379971 479.764086902142 274993856.0 12123.0 ENST00000471152.1_2_3:161146917-161147007:-|nuORF;;ENSG00000198242|ENST00000422514|RPL23A;;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;;ENST00000491601.1_1_17:38595721-38595772:-|nuORF;;ENST00000467573.1_1_21:40499576-40499963:+|nuORF 7.762686093648274 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12126 62.381 6.2 8769700.0 25 0 644140.0 + 5897 DPYKVYRIV 9 70 576.8238729693549 1151.6331930055096 2 576.8243896365166 MULTI CID FTMS 0 0 0 12123 8401341.0 0.7857657130864103 1 -0.047119140625 3 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 47.74868867922204 0.0453060283459952 3 DPYKVY 6 3 67.925 0.0 0.0 5.8981 0.0 0.0 0.0 383.2403963678344 383.2403963678344 40.13296575220323 0.0 0.0 0.0 0 1.1549471895720984 1.5228787452803376 0.0 0.0 + DPYKVY 5.8981 + + 75 + 1 1.372 46567.5 1.0 6719 5405 12123 HBL1_DMSO_200M_050219_1,12126 HBL1_DMSO_200M_050219_1,12126,DPYKVYRIV True True DPYKVYRIV 62.381151 576.824389636517 1092468048.0 12123.0 nc|ENSG00000137265|Q15306-2|IRF4;;ENSG00000137265|ENST00000380956|IRF4;;chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;;ENST00000495137.5_1_6:394829-397293:+|nuORF 7.1482547124226885 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12127 62.382 14.0 3075000.0 25 0 260760.0 + 22633 LPYPIHQV 8 73 483.7743679929477 965.5341830526952 2 483.7747680544853 MULTI CID FTMS 0 0 0 12123 3220702.0 1.0 0 0.0 4 Unmodified _LPYPIHQV_ ENSG00000176444|ENST00000368361|CLK2;ENST00000416636.2_1_7:23624683-23625604:-|nuORF;ENST00000497188.1_1_1:155234069-155238352:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2 32.116972079565 0.368454113111938 3 {I|L}PY 3 5 48.486 0.0 0.0 5.0217 0.0 0.0 0.0 589.310037159384 589.310037159384 22.800084529637985 0.0 0.0 0.0 0 0.7059771852360797 1.5228787452803376 0.0 0.0 + {I|L}PY 5.0217 + + 83 + 1 1.372 40814.9 1.0 6720 5405 12123 HBL1_DMSO_200M_050219_1,12127 HBL1_DMSO_200M_050219_1,12127,LPYPIHQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12128 62.384 19.0 1248900.0 25 0 241320.0 + 33685 SIYNGDMEKI 10 42 585.2786538291008 1168.5427547250015 2 585.2789794802666 MULTI CID FTMS 0 0 0 12123 2735329.5 0.7294296127548671 1 -0.047119140625 5 Unmodified _SIYNGDMEKI_ ENSG00000176171|ENST00000368636|BNIP3;ENST00000550043.1_1_14:28733783-28734191:+|nuORF 18.373094154950223 0.5392593366289069 3 {[TV]|[{I|L}S]}YN 4 6 44.693 0.0 0.0 3.8247 0.0 0.0 0.0 688.2995699518186 688.2995699518186 41.197887582883936 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + {[TV]|[{I|L}S]}YN 3.8247 + + 19 + 1 1.372 26134.4 1.0 6721 5405 12123 HBL1_DMSO_200M_050219_1,12128 HBL1_DMSO_200M_050219_1,12128,SIYNGDMEKI False True SIYNGDMEKI 62.383509 585.278979480267 60122432.0 12123.0 ENST00000550043.1_1_14:28733783-28734191:+|nuORF;;ENSG00000176171|ENST00000368636|BNIP3 6.824239889780681 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12129 62.385 43.0 1299300.0 25 0 161390.0 + 5224 DIYKIREI 8 65 525.3027976617408 1048.5910423902817 2 525.3033325076103 MULTI CID FTMS 0 0 0 12123 1305991.375 0.2697768552652073 2 -0.1705894470214843 6 Unmodified _DIYKIREI_ ENSG00000133112|ENST00000530705|TPT1;ENST00000442760.2_1_13:45914489-45915204:-|nuORF 16.149105407346934 0.6723412507259107 3 {I|L}DYK{I|L}{[RE]|[WV]}{I|L} 8 2 + 64.254 0.0 0.0 6.1277 6.1277 80.765 0.0 0.0 0.0 49.561641682892514 2.048154103175748 2.048154103175748 3.010299956639805 0 0.4247425010840047 2.0 0.0 0.0 {I|L}DYK{I|L}{[RE]|[WV]}{I|L};D{I|L}YK{I|L}{[RE]|[WV]}{I|L};{I|L}DY{I|L}K{[RE]|[WV]}{I|L};{I|L}D{I|L}YK{[RE]|[WV]}{I|L};D{I|L}Y{I|L}K{[RE]|[WV]}{I|L};D{I|L}{I|L}YK{[RE]|[WV]}{I|L} 6.1277;5.8406;5.6727;5.3856;5.3856;5.0985 -;+;-;-;-;- + 120 + 1 1.372 49105.4 1.0 6722 5405 12123 HBL1_DMSO_200M_050219_1,12129 HBL1_DMSO_200M_050219_1,12129,DIYKIREI False True DIYKIREI 62.38473 525.30333250761 88615752.0 12123.0 ENSG00000133112|ENST00000530705|TPT1;;ENST00000442760.2_1_13:45914489-45915204:-|nuORF 3.3052833875020347 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12130 62.386 27.0 960080.0 25 0 70677.0 + 33598 SIPHEVPQI 9 57 510.2800157297304 1018.5454785262608 2 510.2792846560478 MULTI CID FTMS 0 0 0 12123 1038788.0625 0.510460117787274 5 -0.4089927673339844 7 Unmodified _SIPHEVPQI_ ENSG00000096717|ENST00000212015|SIRT1 26.88365393820708 0.1891292719743517 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EVTV 6 5 23.193 0.0 0.0 2.277 0.0 0.0 0.0 353.18620053237333 353.18620053237333 9.69782205064881 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EVTV 2.277 - 89 1 1.372 28863.5 1.0 6723 5405 12123 HBL1_DMSO_200M_050219_1,12130 HBL1_DMSO_200M_050219_1,12130,SIPHEVPQI False True SIPHEVPQI 62.385907 510.279284656048 17772632.0 12123.0 ENSG00000096717|ENST00000212015|SIRT1 4.718960444132487 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12131 62.387 43.0 737110.0 25 0 105380.0 -1 0 60 434.24358628486095 433.23630981826096 1 434.2432128787041 MULTI CID FTMS 0 0 0 12123 1038350.375 0.2437229652390642 -11 1.040802001953125 8 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.372 33315.5 1.0 6724 5405 12123 HBL1_DMSO_200M_050219_1,12131 HBL1_DMSO_200M_050219_1,12131, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12132 62.388 40.0 609630.0 25 0 39649.0 34170 SLMQNGYPV 9 53 504.7442807971725 1007.474008661145 2 504.7445861697197 MULTI CID FTMS 0 0 0 12123 918786.4375 0.6949729916786194 2 -0.1705894470214843 9 Unmodified _SLMQNGYPV_ ENSG00000141668|ENST00000269503|CBLN2;ENST00000581425.1_1_18:70205413-70206043:-|nuORF;ENST00000583651.1_1_18:70205413-70210237:-|nuORF 7.910154910731844 0.6385446671287552 3 V 1 8 13.099 0.0 0.0 1.3002 0.0 0.0 890.394226106749 0.0 890.394226106749 0.0 6.109243748081781 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.3002 + + 20 + 1 1.372 28595.6 1.0 6725 5405 12123 HBL1_DMSO_200M_050219_1,12132 HBL1_DMSO_200M_050219_1,12132,SLMQNGYPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12133 62.39 50.0 1266800.0 25 0 116490.0 + 24742 MPFDPSKV 8 88 460.7306051205 919.4466573078 2 460.7307617068291 MULTI CID FTMS 0 0 0 12123 872155.6875 0.8145137697831044 -1 0.1328506469726562 10 Unmodified _MPFDPSKV_ ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB 47.74868867922204 0.1498366402366518 3 MP{M(Oxidation (M))|F}DPSKV 8 0 + 80.387 0.0 0.0 8.7429 8.7429 97.156 0.0 0.0 0.0 37.0217596488785 11.40978057358332 11.40978057358332 21.01342204748164 0 1.1237125054200234 1.6989700043360187 0.3054621874040891 0.0 + + MP{M(Oxidation (M))|F}DPSKV;MP{M(Oxidation (M))|F}DV[QA]{I|L};MP{M(Oxidation (M))|F}DV[VG]GV;MPMT[WR]V;MP[EC][{I|L}T]KV 8.7429;6.4575;6.3833;4.3946;4.3363 +;-;-;-;- + 247 + 1 1.372 57416.9 1.0 6726 5405 12123 HBL1_DMSO_200M_050219_1,12133 HBL1_DMSO_200M_050219_1,12133,MPFDPSKV False True MPFDPSKV 62.389613 460.730761706829 17478664.0 12123.0 nc|ENSG00000136068|O75369-5|FLNB;;nc|ENSG00000136068|O75369-3|FLNB;;nc|ENSG00000136068|O75369-4|FLNB;;nc|ENSG00000136068|O75369-7|FLNB;;nc|ENSG00000136068|O75369-2|FLNB;;ENSG00000136068|ENST00000295956|FLNB;;nc|ENSG00000136068|O75369-6|FLNB;;nc|ENSG00000136068|O75369-9|FLNB;;nc|ENSG00000136068|O75369-8|FLNB 8.574328104654947 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12134 62.392 143.0 373220.0 25 0 33419.0 + 45768 YYITNDTVQTY 11 99 690.8192090097036 1379.6238650862072 2 690.8206664919853 MULTI CID FTMS 0 0 0 12123 581667.5625 0.049182645928702 4 -0.359100341796875 11 Unmodified _YYITNDTVQTY_ ENSG00000144028|ENST00000323853|SNRNP200 39.94969957227396 0.2131707853268865 3 YYSV 4 8 28.205 0.0 0.0 2.0444 0.0 0.0 0.0 864.3739739949311 864.3739739949311 2.64645333192 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.0 YYSV 2.0444 - 1309 1 1.372 44069.0 1.0 6727 5405 12123 HBL1_DMSO_200M_050219_1,12134 HBL1_DMSO_200M_050219_1,12134,YYITNDTVQTY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12135 62.394 61.0 647200.0 25 0 48937.0 + -1 PLCVTRVV 8 73 472.2746400757141 0 472.2756835818291 PEAK CID FTMS 0 0 0 12123 562191.75 1.0 0 0.0 12 Carbamidomethyl (C) _PLC(Carbamidomethyl (C))VTRVV_ REV__ENSG00000104368|ENST00000220809|PLAT;REV__nc|ENSG00000104368|P00750-3|PLAT;REV__nc|ENSG00000104368|P00750-4|PLAT 5.760428011301431 0.5786759180849727 3 {I|L} 1 -1 4.6041 0.0 0.0 0.48848 0.0 0.0 760.3920097883439 66.03573785953358 826.4277476478775 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.48848 + + 9 + 1 1.372 39738.2 1.0 6728 5405 12123 HBL1_DMSO_200M_050219_1,12135 HBL1_DMSO_200M_050219_1,12135,PLCVTRVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12136 62.395 54.0 984910.0 25 0 91491.0 + -1 PVRPMGVL 8 85 442.755915619272 883.4972783053439 2 442.7564575076103 MULTI CID FTMS 0 0 0 12123 548608.8125 0.3014220480285461 -10 0.9868431091308594 13 Oxidation (M) _PVRPM(Oxidation (M))GVL_ REV__ENST00000411425.1_1_2:95824760-95825081:-|nuORF 6.354104778181461 0.7857632046190106 3 {I|L} 1 -1 10.837 0.0 0.0 1.2267 0.0 0.0 752.4025345082721 0.0 752.4025345082721 0.0 1.0835455498197266 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2267 + + 48 + 1 1.372 46878.3 1.0 6729 5405 12123 HBL1_DMSO_200M_050219_1,12136 HBL1_DMSO_200M_050219_1,12136,PVRPMGVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12137 62.397 82.0 493890.0 25 0 72003.0 + 8317 ERHEYIYV 8 74 554.7738639091052 1107.5331748850103 2 554.7745239138603 MULTI CID FTMS 0 0 0 12123 527714.9375 0.763645508192641 -1 0.1328506469726562 14 Unmodified _ERHEYIYV_ REV__ENSG00000184381|ENST00000332509|PLA2G6;REV__ENST00000463287.1_1_22:38508170-38508779:-|nuORF;REV__nc|ENSG00000184381|O60733-2|PLA2G6 32.116972079565 0.368454113111938 3 YV 2 -1 17.787 0.0 0.0 1.606 0.0 0.0 827.3907321133291 0.0 827.3907321133291 0.0 7.871763646415122 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 YV 1.606 + + 99 + 1 1.372 37562.4 1.0 6730 5405 12123 HBL1_DMSO_200M_050219_1,12137 HBL1_DMSO_200M_050219_1,12137,ERHEYIYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12138 62.4 134.0 440430.0 25 0 30262.0 + 5223 DIYKIREI 8 93 350.5378481900325 1048.5917151702974 3 350.5376464724541 MULTI CID FTMS 0 0 0 12123 401641.84375 0.125939825237502 2 -0.1705894470214843 15 Unmodified _DIYKIREI_ ENSG00000133112|ENST00000530705|TPT1;ENST00000442760.2_1_13:45914489-45915204:-|nuORF 13.90604991867851 0.7054780292895731 3 {NN|[MP]|[D{I|L}]|[EV]}YK{I|L}{[RE]|[WV]}{I|L} 8 0 + 47.101 0.0 0.0 4.4918 4.4918 79.299 0.0 0.0 0.0 36.38743756437101 0.6348625752110593 0.6348625752110593 6.020599913279625 0 0.0 2.0 0.0 0.4247425010840047 + + {NN|[MP]|[D{I|L}]|[EV]}YK{I|L}{[RE]|[WV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}K{[RE]|[WV]}{I|L} 4.4918;3.9177 +;- + 48 + 1 1.372 53537.0 1.0 6731 5405 12123 HBL1_DMSO_200M_050219_1,12138 HBL1_DMSO_200M_050219_1,12138,DIYKIREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12139 62.402 104.0 448680.0 25 0 44047.0 + 127 AALDRLEKL 9 89 514.8088733975068 1027.6031938618137 2 514.8094360232353 MULTI CID FTMS 0 0 0 12123 416244.3125 1.0 0 0.0 16 Unmodified _AALDRLEKL_ ENSG00000138376|ENST00000260947|BARD1;ENST00000471787.1_1_2:215674137-215674392:-|nuORF;ENST00000479904.1_1_2:215661783-215674374:-|nuORF;nc|ENSG00000138376|Q99728-2|BARD1;nc|ENSG00000138376|Q99728-4|BARD1 31.26834338654808 0.1333407332142048 3 K{I|L} 2 7 21.198 0.0 0.0 2.0628 0.0 0.0 768.4132251157035 0.0 768.4132251157035 0.0 0.2950000835532052 0.0 0.0 0 0.5 0.0 0.0 0.0 + K{I|L} 2.0628 + + 98 1 1.372 40685.5 1.0 6732 5405 12123 HBL1_DMSO_200M_050219_1,12139 HBL1_DMSO_200M_050219_1,12139,AALDRLEKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12140 62.405 162.0 385290.0 25 0 24982.0 + -1 NQLICSMIDS 10 107 570.25687025812 1138.49918758304 2 570.2575561404228 MULTI CID FTMS 0 0 0 12123 369059.71875 0.8099881134548819 -1 0.1328506469726562 17 Oxidation (M) _NQLICSM(Oxidation (M))IDS_ REV__ENSG00000197415|ENST00000362010|VEPH1;REV__nc|ENSG00000197415|Q14D04-2|VEPH1;REV__nc|ENSG00000197415|Q14D04-3|VEPH1;REV__nc|ENSG00000197415|Q14D04-4|VEPH1 13.90604991867851 0.6142120002215601 3 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L} 4 -1 38.098 0.0 0.0 3.3464 0.0 0.0 0.0 667.2070072363413 667.2070072363413 25.334030188405382 0.0 0.0 0.0 0 0.5 0.7695510786217261 0.1462566630072955 0.7742275032520141 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L} 3.3464 + + 88 1 1.372 53199.8 1.0 6733 5405 12123 HBL1_DMSO_200M_050219_1,12140 HBL1_DMSO_200M_050219_1,12140,NQLICSMIDS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12141 62.409 195.0 428020.0 25 0 50288.0 + 34208 SLPEELNRV 9 101 528.7868064898689 1055.5590600465378 2 528.7878295779228 MULTI CID FTMS 0 0 0 12123 374281.5625 1.0 0 0.0 18 Unmodified _SLPEELNRV_ ENSG00000137815|ENST00000389629|RTF1 27.628801355627647 0.1796483985696185 3 {[TV]|[{I|L}S]}PEE{I|L} 6 3 58.148 0.0 0.0 5.5088 0.0 0.0 0.0 384.19968591861567 384.19968591861567 29.10728139283883 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.7742275032520141 0.0 + {[TV]|[{I|L}S]}PEE{I|L} 5.5088 + + 115 + 1 1.372 71701.8 1.0 6734 5405 12123 HBL1_DMSO_200M_050219_1,12141 HBL1_DMSO_200M_050219_1,12141,SLPEELNRV False True SLPEELNRV 62.409138 528.787829577923 3561429.5 12123.0 ENSG00000137815|ENST00000389629|RTF1 5.061285654703776 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12142 62.413 174.0 419690.0 25 0 30378.0 30060 QVALENCSAV 10 124 517.2510535728634 1032.487554212527 2 517.2501708865166 MULTI CID FTMS 0 0 0 12123 348671.3125 0.0934825260161263 -5 0.5744247436523438 19 Unmodified _QVALENCSAV_ ENSG00000215788|ENST00000356876|TNFRSF25;ENST00000469691.5_1_1:6522722-6525298:-|nuORF;ENST00000513135.5_1_1:6524426-6525611:-|nuORF;nc|ENSG00000215788|Q93038-10|TNFRSF25;nc|ENSG00000215788|Q93038-11|TNFRSF25;nc|ENSG00000215788|Q93038-12|TNFRSF25;nc|ENSG00000215788|Q93038-2|TNFRSF25;nc|ENSG00000215788|Q93038-3|TNFRSF25;nc|ENSG00000215788|Q93038-4|TNFRSF25;nc|ENSG00000215788|Q93038-5|TNFRSF25;nc|ENSG00000215788|Q93038-6|TNFRSF25;nc|ENSG00000215788|Q93038-7|TNFRSF25;nc|ENSG00000215788|Q93038-9|TNFRSF25 14.838274106304384 0.5985701837916485 3 QV 2 8 14.553 0.0 0.0 1.4095 0.0 0.0 787.350375723072 0.0 787.350375723072 0.0 3.936204328559427 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + QV 1.4095 + + 357 + 1 1.372 61784.3 1.0 6735 5405 12123 HBL1_DMSO_200M_050219_1,12142 HBL1_DMSO_200M_050219_1,12142,QVALENCSAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12143 62.421 505.0 559680.0 25 0 69303.0 + + 16262 HLAEVLERV 9 218 533.828913394117 1065.6432738550338 2 533.8289062380791 MULTI CID FTMS 0 0 0 12123 274136.78125 1.0 0 0.0 20 Unmodified _IVSIVLFYL_ ENSG00000155827|ENST00000389120|RNF20 38.15118350030904 0.0856056900103839 3 [{I|L}V]SV{I|L}[PG]S{I|L}D 10 -1 49.338 0.0 0.0 4.6299 0.0 0.0 0.0 82.0669420831664 82.0669420831664 29.20484991509652 0.0 0.0 0.0 0 0.8494850021680094 2.0 1.4143943297944483 0.0 [{I|L}V]SV{I|L}[PG]S{I|L}D 4.6299 - 6915 + 1 1.372 215215.2 1.0 6736 5405 12123 HBL1_DMSO_200M_050219_1,12143 HBL1_DMSO_200M_050219_1,12143,IVSIVLFYL False False HLAEVLERV 62.421451 533.828906238079 9619791.0 12123.0 ENSG00000155827|ENST00000389120|RNF20 2.4669097661972046 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12145 62.426 6.7 4206400.0 25 0 306800.0 + 24896 MPNTRPPII 9 63 519.791667430783 1037.568781928366 2 519.7922241091728 MULTI CID FTMS 0 0 0 12144 9205496.0 0.8463139840495187 1 -0.1234703063964843 1 Unmodified _MPNTRPPII_ ENSG00000084774|ENST00000264705|CAD 19.256988751693697 0.3154191944385105 3 MPN 3 6 46.682 0.0 0.0 4.4992 0.0 0.0 0.0 692.4105901019949 692.4105901019949 33.918227804635315 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + MPN 4.4992 + + 12 + 1 1.372 32576.2 1.0 6737 5406 12144 HBL1_DMSO_200M_050219_1,12145 HBL1_DMSO_200M_050219_1,12145,MPNTRPPII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12146 62.427 54.0 1236700.0 25 0 151580.0 + -1 VIIWCSALL 9 97 537.8056314195719 1073.5967099059435 2 537.8058959841728 MULTI CID FTMS 0 0 0 12144 1169294.375 0.3935847282466647 2 -0.2127609252929687 2 Carbamidomethyl (C) _VIIWC(Carbamidomethyl (C))SALL_ REV__ENSG00000122641|ENST00000242208|INHBA 36.04419817259434 0.0971720506436186 3 V{I|L}[{M(Oxidation (M))|F}V]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L} 9 -1 + 61.621 0.0 0.0 5.7397 5.7397 77.404 0.0 0.0 0.0 18.3103844862778 3.7414365283145656 3.7414365283145656 1.5051499783199065 0 0.8807196863200843 2.0 0.7742275032520141 0.0 V{I|L}[{M(Oxidation (M))|F}V]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L};V{I|L}{I|L}[YG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L};[{I|L}V][C(Carbamidomethyl (C))R]SD{I|L}V{I|L};{[TV]|[{I|L}S]}{[SA]|[TG]}G{I|L}SD{I|L}V{I|L};V{I|L}T[MT]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L};{[TV]|[{I|L}S]}{[QS]|[NT]}{I|L}SD{I|L}V{I|L};V{I|L}{I|L}[EP][Y{I|L}]D{I|L};V{I|L}[{M(Oxidation (M))|F}V]S{I|L}{[NV]|[RG]}[PS];{[ET]|[MV]}KG{I|L}SD{I|L}V{I|L};V{I|L}T[MT]{I|L}{[NV]|[RG]}[PS] 5.7397;5.5995;5.5502;5.4643;5.4142;5.2962;4.9763;4.4755;4.3262;4.15 -;-;-;-;-;-;-;-;-;- 591 + 1 1.372 60220.9 1.0 6738 5406 12144 HBL1_DMSO_200M_050219_1,12146 HBL1_DMSO_200M_050219_1,12146,VIIWCSALL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12147 62.428 27.0 1904700.0 25 0 348650.0 -1 VTELSAYCE 9 86 536.2383766930559 1070.4622004529117 2 536.2390014529228 MULTI CID FTMS 0 0 0 12144 1851283.25 0.7508697460595003 -1 0.047119140625 3 Carbamidomethyl (C) _VTELSAYC(Carbamidomethyl (C))E_ ENSG00000151136|ENST00000280758|ABTB3;nc|ENSG00000151136|A6QL63-2|ABTB3;nc|ENSG00000151136|A6QL63-4|ABTB3;nc|ENSG00000151136|A6QL63-5|ABTB3 16.942295170755138 0.3780752226737986 3 {[TV]|[{I|L}S]}DPT 5 -1 40.445 0.0 0.0 3.7783 0.0 0.0 0.0 554.1965113118362 554.1965113118362 25.964015683995783 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}DPT 3.7783 - 136 1 1.372 43533.2 1.0 6739 5406 12144 HBL1_DMSO_200M_050219_1,12147 HBL1_DMSO_200M_050219_1,12147,VTELSAYCE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12148 62.43 40.0 1090900.0 25 0 218870.0 + -1 GQEQCMTLI 9 83 548.2442535879578 1094.4739542427155 2 548.2443115115166 MULTI CID FTMS 0 0 0 12144 985954.375 1.0 0 0.0 4 Carbamidomethyl (C),Oxidation (M) _GQEQC(Carbamidomethyl (C))M(Oxidation (M))TLI_ REV__ENSG00000116580|ENST00000368331|GON4L;REV__ENST00000473267.1_1_1:155720377-155721671:-|nuORF;REV__nc|ENSG00000116580|Q3T8J9-3|GON4L 16.942295170755138 0.3780752226737986 3 {[QG]|[NA]}{I|L} 3 -1 22.051 0.0 0.0 2.0148 0.0 0.0 0.0 793.2869784949218 793.2869784949218 1.478174818886373 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[QG]|[NA]}{I|L} 2.0148 - 57 1 1.372 41385.4 1.0 6740 5406 12144 HBL1_DMSO_200M_050219_1,12148 HBL1_DMSO_200M_050219_1,12148,GQEQCMTLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12149 62.432 98.0 753640.0 25 0 64669.0 + 24291 MAYAGARFV 9 92 493.2495848535469 984.484616773894 2 493.2500488162041 MULTI CID FTMS 0 0 0 12144 890003.875 0.7230416319872225 1 -0.1234703063964843 5 Unmodified _MAYAGARFV_ ENSG00000146701|ENST00000315758|MDH2;ENST00000424167.2_1_7:75689738-75694307:+|nuORF;nc|ENSG00000146701|P40926-2|MDH2 34.10243960390752 0.1078313939113124 3 MAYAG 5 4 61.186 0.0 0.0 6.215 0.0 0.0 0.0 488.2640474908813 488.2640474908813 49.19592522764098 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + MAYAG 6.215 + + 149 + 1 1.372 58781.1 1.0 6741 5406 12144 HBL1_DMSO_200M_050219_1,12149 HBL1_DMSO_200M_050219_1,12149,MAYAGARFV True True MAYAGARFV 62.431796 493.250048816204 12582001.0 12144.0 nc|ENSG00000146701|P40926-2|MDH2;;ENSG00000146701|ENST00000315758|MDH2;;ENST00000424167.2_1_7:75689738-75694307:+|nuORF 5.806276957194011 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12150 62.434 96.0 560370.0 25 0 58384.0 + 28163 PPSAGIAISV 10 89 456.26343039887297 910.512307864546 2 456.2635986208916 MULTI CID FTMS 0 0 0 12144 781801.125 0.2702114354780399 14 -1.1026115417480469 6 Unmodified _PPSAGIAISV_ ENST00000344458.6_1_2:220414548-220414737:+|nuORF 29.081581746732265 0.3152867722954398 3 P{I|L}GA{I|L}SV 7 4 33.008 0.0 0.0 3.6252 0.0 0.0 255.12266738105623 0.0 255.12266738105623 0.0 15.61320434312918 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.0 P{I|L}GA{I|L}SV 3.6252 - 110 1 1.372 48748.0 1.0 6742 5406 12144 HBL1_DMSO_200M_050219_1,12150 HBL1_DMSO_200M_050219_1,12150,PPSAGIAISV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12151 62.436 84.0 1326300.0 25 0 87983.0 1386 ALALDERKL 9 118 343.54131361068977 1027.602111432269 3 343.5412780642509 MULTI CID FTMS 0 0 0 12144 514510.8125 1.0 0 0.0 7 Unmodified _ALALDERKL_ ENSG00000131711|ENST00000296755|MAP1B 41.8396318013385 0.0653578398400075 3 AA{I|L}D 4 5 52.445 0.0 0.0 5.1036 0.0 0.0 0.0 654.3935030572874 654.3935030572874 33.71010579734669 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.4247425010840047 0.0 AA{I|L}D 5.1036 - 623 + 1 1.372 92415.9 1.0 6743 5406 12144 HBL1_DMSO_200M_050219_1,12151 HBL1_DMSO_200M_050219_1,12151,ALALDERKL True False AALDRLEKL 62.435752 343.541278064251 7032391.0 12144.0 nc|ENSG00000138376|Q99728-4|BARD1;;ENSG00000138376|ENST00000260947|BARD1;;ENST00000471787.1_1_2:215674137-215674392:-|nuORF;;ENST00000479904.1_1_2:215661783-215674374:-|nuORF;;nc|ENSG00000138376|Q99728-2|BARD1 2.8203903834025064 3.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12152 62.444 476.0 537010.0 25 0 43961.0 + -1 KIIDRAITSL 10 194 565.3502918495292 564.3430153829291 1 565.3506957888603 MULTI CID FTMS 0 0 0 12144 393224.28125 0.7993163060964241 1 -0.1234703063964843 8 nc|ENSG00000101161|O94906-2|PRPF6;ENSG00000101161|ENST00000266079|PRPF6 3 [DP]{I|L} 3 -1 23.97 0.0 0.0 4.2473 0.0 0.0 0.0 236.1563753284948 236.1563753284948 6.370958958282667 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.2887254899964357 0.0 [DP]{I|L} 4.2473 - 129 1 1.372 189276.1 1.0 6744 5406 12144 HBL1_DMSO_200M_050219_1,12152 HBL1_DMSO_200M_050219_1,12152, False False KIIDRAITSL 62.44418 565.35069578886 2431892.0 12144.0 nc|ENSG00000101161|O94906-2|PRPF6;;ENSG00000101161|ENST00000266079|PRPF6 4.901673316955566 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12153 62.453 476.0 316840.0 25 0 23290.0 -1 IDAQGATLMQM 11 143 605.7760539944684 1209.537555055737 2 605.7767822146416 MULTI CID FTMS 0 0 0 12144 398935.125 0.6510391852853457 -2 0.1799697875976562 9 2 Oxidation (M) _IDAQGATLM(Oxidation (M))QM(Oxidation (M))_ nc|ENSG00000101445|Q96T49-2|PPP1R16B 20.41453444215458 0.6105011870913812 3 [{I|L}T]GDA[QA]{I|L} 8 -1 38.308 0.0 0.0 3.1672 0.0 0.0 0.0 437.1167536243492 437.1167536243492 6.150367302831711 0.0 0.0 0.0 0 0.8494850021680094 0.638272163982407 2.190614065464281 0.2887254899964357 [{I|L}T]GDA[QA]{I|L} 3.1672 - 1798 1 1.372 109120.1 1.0 6745 5406 12144 HBL1_DMSO_200M_050219_1,12153 HBL1_DMSO_200M_050219_1,12153,IDAQGATLMQM False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12154 62.457 217.0 594670.0 25 0 62936.0 -1 0 160 340.2093413180756 678.4041297029512 2 340.2092162966728 MULTI CID FTMS 0 0 0 12144 352999.21875 0.0199238050346945 9 -0.7029991149902344 10 3 G 1 -1 8.3683 0.0 0.0 1.2335 0.0 0.0 603.3713671070512 0.0 603.3713671070512 0.0 2.527101871394134 0.0 0.0 0 0.0 0.0 0.0 0.0 G 1.2335 - 17 + 1 1.372 107809.1 1.0 6746 5406 12144 HBL1_DMSO_200M_050219_1,12154 HBL1_DMSO_200M_050219_1,12154, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12155 62.461 210.0 559320.0 25 0 84671.0 + 15637 IQIMKVEEI 9 134 559.8091176463107 1117.603682359421 2 559.8105956912041 MULTI CID FTMS 0 0 0 12144 348900.3125 0.19179379327201 -4 0.4251251220703125 11 Oxidation (M) _IQIM(Oxidation (M))KVEEI_ ENSG00000105640|ENST00000222247|RPL18A;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 65.47368725323818 0.0230515101691092 3 {I|L}Q{I|L}[{M(Oxidation (M))|F}E]V{I|L}CS 9 4 71.652 0.0 0.0 6.4112 0.0 0.0 0.0 82.06688867740468 82.06688867740468 31.535984316004217 0.0 0.0 0.0 0 0.8252574989159953 0.9208187539523752 1.610924374808178 0.0 {I|L}Q{I|L}[{M(Oxidation (M))|F}E]V{I|L}CS 6.4112 - 2757 + 1 1.372 92632.1 1.0 6747 5406 12144 HBL1_DMSO_200M_050219_1,12155 HBL1_DMSO_200M_050219_1,12155,IQIMKVEEI True False IQIMKVEEI 62.460711 559.810595691204 30890104.0 12144.0 ENSG00000105640|ENST00000222247|RPL18A;;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 4.808713277180989 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12156 62.475 800.0 295820.0 25 0 21702.0 + 1846 ALVAPATAP 9 231 405.73954711865895 0 405.7393981814384 PEAK CID FTMS 0 0 0 12144 216763.359375 1.0 0 0.0 12 Unmodified _ALVAPATAP_ REV__ENSG00000161940|ENST00000293805|BCL6B 26.34127834903884 0.1435854383732919 3 S 1 -1 9.8374 0.0 0.0 1.2153 0.0 0.0 522.3161988912468 197.09388147525627 719.410080366503 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 S 1.2153 - 164 + 1 1.372 183639.6 0.9700000286102296 6748 5406 12144 HBL1_DMSO_200M_050219_1,12156 HBL1_DMSO_200M_050219_1,12156,ALVAPATAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12157 62.486 663.0 179520.0 25 0 10873.0 -1 0 130 632.9777156296999 1895.9113174893 3 633.3127319216728 MULTI CID FTMS 0 0 0 12144 164271.546875 0.2652165171487717 3 -0.311981201171875 13 3 [H{I|L}][NP]{I|L}N[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 16 -1 + 42.071 0.0 0.0 2.2191 2.2191 80.092 0.0 0.0 0.0 5.6517570373150505 17.176704309270505 5.6517570373150505 15.794502986019836 0 0.3054621874040891 1.6989700043360187 0.0 0.0 [H{I|L}][NP]{I|L}N[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]};[{I|L}T][H{I|L}]QP[C(Carbamidomethyl (C))M]DG{M(Oxidation (M))|F}{I|L}H{I|L}[KS];{[QS]|[NT]}G{I|L}{[ET]|[MV]}{M(Oxidation (M))|F}QY[{M(Oxidation (M))|F}V]{I|L}H{I|L}[KS];{[QS]|[NT]}G{I|L}{[ET]|[MV]}{M(Oxidation (M))|F}QYP[YV]H{I|L}[KS];{[QS]|[NT]}G{I|L}[WM][YT]EG{M(Oxidation (M))|F}{I|L}H{I|L}[KS];{NN|[MP]|[D{I|L}]|[EV]}R[KC]{M(Oxidation (M))|F}QYP[YV]H{I|L}[KS];{NN|[MP]|[D{I|L}]|[EV]}R[KC]{M(Oxidation (M))|F}QY[{M(Oxidation (M))|F}V]{I|L}H{I|L}[KS];{[QS]|[NT]}G{I|L}{[ET]|[MV]}{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}EG{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]};{NN|[MP]|[D{I|L}]|[EV]}R[KC]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}EG{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]};[{I|L}T][MT]KN[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}[KS] 2.2191;1.386;1.3781;1.3781;1.3364;1.3317;1.3317;1.3225;1.2751;1.249 -;-;-;-;-;-;-;-;-;- 2214 1 1.372 94577.5 1.0 6749 5406 12144 HBL1_DMSO_200M_050219_1,12157 HBL1_DMSO_200M_050219_1,12157, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12158 62.498 710.0 339100.0 25 0 25991.0 + 33863 SLFEKGLKNV 10 212 567.8292724557726 1133.6439919783452 2 567.8301879763603 MULTI CID FTMS 0 0 0 12144 146459.59375 0.7622268662003299 -1 0.047119140625 14 Unmodified _SLFEKGLKNV_ ENSG00000118564|ENST00000341285|FBXL5;nc|ENSG00000118564|Q9UKA1-2|FBXL5 98.72992552434108 0.0087080151363284 3 VT{M(Oxidation (M))|F}EKG{I|L}KNV 10 2 + 110.79 0.0 0.0 9.7726 9.7726 90.118 0.0 0.0 0.0 95.89259357661854 12.01667520279372 12.01667520279372 4.700589333738591 0 2.9336068845642203 2.0 0.7396518287104438 1.3979400086720375 VT{M(Oxidation (M))|F}EKG{I|L}KNV;VT{M(Oxidation (M))|F}EKG{I|L}KGGV;S{I|L}{M(Oxidation (M))|F}EKG{I|L}KNV;S{I|L}{M(Oxidation (M))|F}EKG{I|L}KGGV;VT{M(Oxidation (M))|F}EKG{I|L}KVN;VT{M(Oxidation (M))|F}EKG{I|L}NKV;S{I|L}{M(Oxidation (M))|F}EKG{I|L}KVN;VT{M(Oxidation (M))|F}V{I|L}{[QS]|[NT]}KNV;VT{M(Oxidation (M))|F}V{[SA]|[TG]}G{I|L}KNV;S{I|L}{M(Oxidation (M))|F}EKG{I|L}NKV 9.7726;9.3579;8.9805;8.5659;8.4741;8.091;7.6821;7.587;7.5234;7.2989 -;-;+;-;-;-;-;-;-;- + 6643 + 1 1.372 181157.5 1.0 6750 5406 12144 HBL1_DMSO_200M_050219_1,12158 HBL1_DMSO_200M_050219_1,12158,SLFEKGLKNV True True SLFEKGLKNV 62.498406 567.83018797636 2018332.5 12144.0 nc|ENSG00000118564|Q9UKA1-2|FBXL5;;ENSG00000118564|ENST00000341285|FBXL5 7.811744054158528 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12159 62.508 465.0 458050.0 25 0 65274.0 + 14077 IAPKVLLA 8 218 412.783767126113 0 412.7832214236259 PEAK CID FTMS 0 0 0 12144 126001.28125 1.0 0 0.0 15 Unmodified _IAPKVLLA_ ENSG00000111206|ENST00000359843|FOXM1;ENST00000536066.1_1_12:2967806-2973707:-|nuORF;nc|ENSG00000111206|Q08050-2|FOXM1 26.34127834903884 0.298120260672589 3 A{I|L}{I|L}V 4 5 15.795 0.0 0.0 1.9179 0.0 0.0 202.1300399369804 222.12505518131096 424.25509511829136 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 A{I|L}{I|L}V 1.9179 - 99 + 1 1.372 162959.0 1.0 6751 5406 12144 HBL1_DMSO_200M_050219_1,12159 HBL1_DMSO_200M_050219_1,12159,IAPKVLLA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12160 62.522 800.0 198980.0 25 0 13123.0 -1 0 201 590.1303903981632 0 590.3275634646416 PEAK CID FTMS 0 0 0 -1 0 16 3 SH{I|L}S 4 -1 14.781 0.0 0.0 1.2545 0.0 0.0 130.7004872802193 620.3157442682249 751.0162315484442 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SH{I|L}S 1.2545 - 126 + 1 1.372 117629.3 0.800000011920929 6752 5406 12144 HBL1_DMSO_200M_050219_1,12160 HBL1_DMSO_200M_050219_1,12160, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12161 62.53 449.0 371890.0 25 0 37043.0 + + -1 AQIHTPVAI 9 179 475.2769216256819 948.5392903181638 2 475.2757751345634 MULTI CID FTMS 0 0 0 12144 98184.75 0.7398958818177505 -3 0.2815017700195312 17 Oxidation (M) _PLYM(Oxidation (M))LLAL_ ENSG00000173163|ENST00000311832|COMMD1;nc|ENSG00000173163|Q8N668-2|COMMD1;ENST00000471704.1_1_2:62132813-62228123:+|nuORF 24.20995872069341 0.5349487244130675 3 [{I|L}A]Y{[QG]|[NA]}T{I|L}A{I|L} 9 -1 + 39.993 0.0 0.0 4.2163 4.2163 72.353 0.0 0.0 0.0 4.3933269383026285 12.787137440624804 4.3933269383026285 1.517412290202671 0 0.9247425010840048 1.5228787452803376 0.0 0.4247425010840047 [{I|L}A]Y{[QG]|[NA]}T{I|L}A{I|L};[{I|L}A]Y{[QS]|[NT]}A{I|L}A{I|L};[{I|L}A][HQ]T[VP]A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[QG]|[NA]}T{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[QS]|[NT]}A{I|L}A{I|L};[{I|L}P]N[HA]T{I|L}A{I|L};[{I|L}P]N[EP][VP]A{I|L};[{M(Oxidation (M))|F}T]V{[QG]|[NA]}T{I|L}A{I|L};[{I|L}P]N[HT]A{I|L}A{I|L};[{I|L}P][HQ]GT{I|L}A{I|L} 4.2163;4.0563;3.9643;3.7531;3.5932;3.5193;3.3989;3.3773;3.3593;3.3336 -;-;-;-;-;-;-;-;-;- 816 1 1.372 127697.1 1.0 6753 5406 12144 HBL1_DMSO_200M_050219_1,12161 HBL1_DMSO_200M_050219_1,12161,PLYMLLAL False False AQIHTPVAI 62.529912 475.275775134563 1961404.375 12144.0 ENSG00000173163|ENST00000311832|COMMD1;;nc|ENSG00000173163|Q8N668-2|COMMD1;;ENST00000471704.1_1_2:62132813-62228123:+|nuORF 4.017887830734253 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12162 62.545 800.0 122340.0 25 0 5015.2 + 25471 NEKEIWETSL 10 151 624.8107361960945 1247.6069194589888 2 625.9420654177666 MULTI CID FTMS 0 0 0 12144 78321.7109375 0.2735037416280703 -3 0.2815017700195312 18 Unmodified _NEKEIWETSL_ REV__ENSG00000109927|ENST00000392793|TECTA 13.90604991867851 0.6142120002215601 3 [AG]D 3 -1 15.457 0.0 0.0 1.2389 0.0 0.0 0.0 1001.4981755227184 1001.4981755227184 -0.6519340387055248 0.0 -0.6519340387055248 0.0 0 0.0 1.3979400086720375 0.3807196863200844 0.0 [AG]D 1.2389 - 1412 1 1.372 83764.0 0.7400000095367432 6754 5406 12144 HBL1_DMSO_200M_050219_1,12162 HBL1_DMSO_200M_050219_1,12162,NEKEIWETSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12164 62.549 47.0 570600.0 25 0 45305.0 18902 LAVRNQQA 8 65 450.2566302429895 898.498707552779 2 450.2625305056572 MULTI CID FTMS 0 0 0 12163 541020.5625 0.2454862422328507 -9 0.862030029296875 1 Unmodified _LAVRNQQA_ ENSG00000111752|ENST00000544916|PHC1;ENST00000433847.2_1_12:9067399-9086462:+|nuORF 11.114462752807354 0.7467182956244686 3 [{I|L}A]VN 4 4 21.26 0.0 0.0 2.3661 0.0 0.0 0.0 498.2409310237353 498.2409310237353 8.16061246681059 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}A]VN 2.3661 - 34 1 1.377 26915.0 1.0 6755 5407 12163 HBL1_DMSO_200M_050219_1,12164 HBL1_DMSO_200M_050219_1,12164,LAVRNQQA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12165 62.551 20.0 2084800.0 25 0 218940.0 + 21813 LPNKVDPLV 9 82 497.800484688412 993.586416443624 2 497.8005554080009 MULTI CID FTMS 0 0 0 12163 1282085.625 0.4564369871545778 -4 0.4049720764160156 2 Unmodified _LPNKVDPLV_ ENSG00000087191|ENST00000310144|PSMC5;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;ENST00000581764.1_1_17:61907522-61908306:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5 34.10243960390752 0.1078313939113124 3 [{I|L}P]D{I|L}D{I|L}P 7 5 43.65 0.0 0.0 4.3932 0.0 0.0 0.0 227.13831596409253 227.13831596409253 18.32387206599456 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 [{I|L}P]D{I|L}D{I|L}P 4.3932 - 586 1 1.377 36586.1 1.0 6756 5407 12163 HBL1_DMSO_200M_050219_1,12165 HBL1_DMSO_200M_050219_1,12165,LPNKVDPLV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12166 62.552 20.0 2463300.0 25 0 268030.0 + 3911 DALEKIKAI 9 83 500.8063781293481 999.5982033254962 2 500.8067809939384 MULTI CID FTMS 0 0 0 12163 1880607.875 0.7330681400471585 -1 0.1234703063964843 3 Unmodified _DALEKIKAI_ ENSG00000130177|ENST00000356221|CDC16;nc|ENSG00000130177|Q13042-2|CDC16;nc|ENSG00000130177|Q13042-3|CDC16;nc|ENSG00000130177|Q13042-4|CDC16 80.6760300276096 0.0173529540220427 3 DA{I|L}EK{I|L}KA{I|L} 9 0 + 101.61 0.0 0.0 10.165 10.165 97.982 0.0 0.0 0.0 32.93008644485309 12.98332479720628 12.98332479720628 20.54235956215813 0 2.579689690656103 2.0 0.5 0.0 + + DA{I|L}EK{I|L}KA{I|L};{[DA]|[EG]}{I|L}EK{I|L}KA{I|L};[{I|L}A]DEK{I|L}KA{I|L};{[SA]|[TG]}V{I|L}{I|L}KAGE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}KAGE{I|L};DA{I|L}[RK]VW{I|L};{[SA]|[TG]}V{I|L}[KA]{I|L}GE{I|L};{[SA]|[TG]}V{I|L}{I|L}KQE{I|L};{[QN]|[E{I|L}]|[KN]}GEK{I|L}KA{I|L};{NN|[MP]|[D{I|L}]|[EV]}AEK{I|L}KA{I|L} 10.165;8.1099;6.0528;5.974;5.1145;5.1096;5.0017;4.9709;4.9097;4.9097 +;+;-;-;-;-;-;-;-;- + 884 + 1 1.377 42329.3 1.0 6757 5407 12163 HBL1_DMSO_200M_050219_1,12166 HBL1_DMSO_200M_050219_1,12166,DALEKIKAI True True DALEKIKAI 62.551739 500.806780993938 16646761.0 12163.0 ENSG00000130177|ENST00000356221|CDC16;;nc|ENSG00000130177|Q13042-3|CDC16;;chr13:114259398-114272278|24|34.25|0.66|5.7|+|0|CDC16,None|1;;nc|ENSG00000130177|Q13042-2|CDC16;;nc|ENSG00000130177|Q13042-4|CDC16 5.112612247467041 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12167 62.553 50.0 834920.0 25 0 98725.0 + 16766 KFYNAGLAY 9 79 523.7706385184198 0 523.7699462771416 PEAK CID FTMS 0 0 0 12163 831251.4375 0.6863052310919882 -1 0.1234703063964843 4 Unmodified _KFYNAGLAY_ ENSG00000072042|ENST00000381346|RDH11;ENST00000553578.5_1_14:68152963-68157118:-|nuORF;nc|ENSG00000072042|Q8TC12-2|RDH11 28.486842064014134 0.1241350795510704 3 A{I|L}Q 3 7 33.5 0.0 0.0 3.2041 0.0 0.0 181.0765420741457 549.2478121393186 730.3243542134644 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.7302046884880937 A{I|L}Q 3.2041 - 23 + 1 1.377 36289.5 1.0 6758 5407 12163 HBL1_DMSO_200M_050219_1,12167 HBL1_DMSO_200M_050219_1,12167,KFYNAGLAY True True KFYNAGLAY 62.553073 523.769946277142 46958904.0 12163.0 nc|ENSG00000072042|Q8TC12-2|RDH11;;ENST00000553578.5_1_14:68152963-68157118:-|nuORF;;ENSG00000072042|ENST00000381346|RDH11 3.7248522440592446 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12168 62.555 62.0 1362400.0 25 0 146580.0 + 3760 DAHIYLNHI 9 86 365.8579892021616 1094.5521382066847 3 365.8575622439384 MULTI CID FTMS 0 0 0 12163 722014.8125 0.0193135519316847 -4 0.4049720764160156 5 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 43.77239144664712 0.0547478964384323 3 [H{I|L}]DAY{I|L}N{I|L}H 9 6 [H{I|L}]DA + + 41.204 20.01 4.5872 3.7645 3.7645 51.908 0.0 0.0 0.0 0.0 28.52813489503241 0.0 0.0 0 0.9247425010840048 0.0 0.0 1.055462187404089 [H{I|L}]DAY{I|L}N{I|L}H 3.7645 - 282 + 1 1.377 73013.2 1.0 6759 5407 12163 HBL1_DMSO_200M_050219_1,12168 HBL1_DMSO_200M_050219_1,12168,DAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12169 62.557 89.0 896430.0 25 0 100740.0 + -1 YYLCKMREE 9 78 646.293741440793 1290.572929948386 2 646.2942993044853 MULTI CID FTMS 0 0 0 12163 698884.3125 0.3113347099218839 -2 0.1705894470214843 6 Carbamidomethyl (C) _YYLC(Carbamidomethyl (C))KMREE_ REV__ENSG00000121892|ENST00000303538|PDS5A;REV__nc|ENSG00000121892|Q29RF7-3|PDS5A 13.90604991867851 0.4602628045680013 3 YY{I|L}D 4 -1 55.745 0.0 0.0 4.3194 0.0 0.0 0.0 733.3138268886202 733.3138268886202 21.07455023214669 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 YY{I|L}D 4.3194 - 136 + 1 1.377 65535.8 1.0 6760 5407 12163 HBL1_DMSO_200M_050219_1,12169 HBL1_DMSO_200M_050219_1,12169,YYLCKMREE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12170 62.558 71.0 1205300.0 25 0 231910.0 + 45784 YYLFENTVEN 10 76 431.1983176616149 1290.5731235850446 3 431.1985961794853 MULTI CID FTMS 0 0 0 12163 675347.0 0.1835231187573906 -2 0.1705894470214843 7 Unmodified _YYLFENTVEN_ REV__ENSG00000157423|ENST00000393567|HYDIN;REV__ENST00000378856.8_2_16:70845233-70899022:-|nuORF;REV__nc|ENSG00000157423|Q4G0P3-2|HYDIN 9.38312468134398 0.6832340498775793 3 YY{I|L}DV 5 -1 44.961 0.0 0.0 3.4838 0.0 0.0 0.0 634.2498873346311 634.2498873346311 22.74227503252014 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YY{I|L}DV 3.4838 - 52 + 1 1.377 77041.9 1.0 6761 5407 12163 HBL1_DMSO_200M_050219_1,12170 HBL1_DMSO_200M_050219_1,12170,YYLFENTVEN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12171 62.559 40.0 1372000.0 25 0 130030.0 + -1 SLQDEIQRV 9 78 544.2890848491091 543.2818083825091 1 544.2889282107353 MULTI CID FTMS 0 0 0 12163 580265.4375 0.8683623350281724 1 -0.0892906188964843 8 ENSG00000065183|ENST00000349139|WDR3 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{I|L} 4 -1 + 16.198 0.0 0.0 2.9815 2.9815 77.698 0.0 0.0 0.0 -12.498774732165998 5.920300943634782 -12.498774732165998 8.662873390841952 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{I|L};[AG]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[{M(Oxidation (M))|F}H]|[RQ]}K{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HK] 2.9815;1.3869;1.225;0.2626 -;-;-;- 34 + 1 1.377 49004.9 1.0 6762 5407 12163 HBL1_DMSO_200M_050219_1,12171 HBL1_DMSO_200M_050219_1,12171, False False SLQDEIQRV 62.559404 544.288928210735 4575638.5 12163.0 ENSG00000065183|ENST00000349139|WDR3 6.739309628804524 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12172 62.568 474.0 730460.0 25 0 67873.0 -1 LPHMDSSM 8 235 467.19309717963847 932.371641426077 2 467.1932250857353 MULTI CID FTMS 0 0 0 12163 543068.4375 1.0 0 0.0 9 Oxidation (M) _LPHMDSSM(Oxidation (M))_ ENST00000373818.8_3_9:124083585-124083669:+|nuORF 6.354104778181461 0.7857632046190106 3 V 1 -1 11.259 0.0 0.0 1.2076 0.0 0.0 815.2921716768567 0.0 815.2921716768567 0.0 0.3567795426783426 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2076 - 303 + 1 1.377 262589.8 1.0 6763 5407 12163 HBL1_DMSO_200M_050219_1,12172 HBL1_DMSO_200M_050219_1,12172,LPHMDSSM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12173 62.569 66.0 1426500.0 25 0 155520.0 + 4538 DAYPNGLQV 9 118 488.740557401362 975.466561869524 2 488.7417785525322 MULTI CID FTMS 0 0 0 12163 479955.0 0.0740177559027947 -4 0.4049720764160156 10 Unmodified _DAYPNGLQV_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 25.399314129420983 0.2080152500878129 3 [NP]G{I|L}Q 5 4 18.481 0.0 0.0 1.8946 0.0 0.0 0.0 463.1830895396991 463.1830895396991 1.878047970805767 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 + [NP]G{I|L}Q 1.8946 + + 509 1 1.377 77841.5 1.0 6764 5407 12163 HBL1_DMSO_200M_050219_1,12173 HBL1_DMSO_200M_050219_1,12173,DAYPNGLQV False True DAYPNGLQV 62.569356 488.741778552532 72799832.0 12163.0 ENSG00000117298|ENST00000374893|ECE1;;nc|ENSG00000117298|P42892-3|ECE1;;nc|ENSG00000117298|P42892-4|ECE1;;ENST00000526194.5_1_1:21560049-21616919:-|nuORF 5.677491664886475 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12174 62.573 204.0 686730.0 25 0 231880.0 -1 0 148 318.12248116989696 634.2304094065939 2 318.1222106814384 MULTI CID FTMS 0 0 0 12163 464614.75 1.0 0 0.0 11 3 V 1 -1 2.4743 0.0 0.0 0.39012 0.0 0.0 352.1197354337408 180.01937280826408 532.1391082420049 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.39012 - 16 + 1 1.377 114574.4 1.0 6765 5407 12163 HBL1_DMSO_200M_050219_1,12174 HBL1_DMSO_200M_050219_1,12174, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12175 62.575 97.0 615380.0 25 0 136940.0 + 6156 DSYYSIHQI 9 76 563.2643545856189 1124.5141562380377 2 563.2646362185478 MULTI CID FTMS 0 0 0 12163 375012.625 0.5988987022900916 -1 0.1234703063964843 12 Unmodified _DSYYSIHQI_ ENSG00000168397|ENST00000404914|ATG4B;ENST00000465399.5_1_2:242577129-242594780:+|nuORF;ENST00000475195.5_1_2:242577129-242594181:+|nuORF;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;ENST00000483778.5_1_2:242577129-242598587:+|nuORF;ENST00000493618.5_1_2:242577129-242598937:+|nuORF;ENST00000494465.5_1_2:242592964-242606150:+|nuORF;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;nc|ENSG00000168397|Q9Y4P1-3|ATG4B;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;nc|ENSG00000168397|Q9Y4P1-6|ATG4B 58.6788170122104 0.0268135626297836 3 {[DS]|[MA]|[CV]|TT}YYS{I|L}HQ{I|L} 9 0 {[DS]|[MA]|[CV]|TT}Y + + 34.505 11.937 3.2693 3.0684 3.0684 50.331 0.0 0.0 0.0 0.0 21.31691345950685 0.0 0.0 0 0.3252574989159953 0.0 0.0 1.110924374808178 + + {[DS]|[MA]|[CV]|TT}YYS{I|L}HQ{I|L} 3.0684 + + 135 + 1 1.377 51444.5 1.0 6766 5407 12163 HBL1_DMSO_200M_050219_1,12175 HBL1_DMSO_200M_050219_1,12175,DSYYSIHQI True True DSYYSIHQI 62.575347 563.264636218548 4895730.5 12163.0 nc|ENSG00000168397|Q9Y4P1-6|ATG4B;;ENST00000493618.5_1_2:242577129-242598937:+|nuORF;;ENST00000465399.5_1_2:242577129-242594780:+|nuORF;;ENSG00000168397|ENST00000404914|ATG4B;;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;;ENST00000494465.5_1_2:242592964-242606150:+|nuORF;;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;;nc|ENSG00000168397|Q9Y4P1-3|ATG4B;;ENST00000475195.5_1_2:242577129-242594181:+|nuORF;;ENST00000483778.5_1_2:242577129-242598587:+|nuORF 8.306740442911783 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12176 62.578 121.0 688870.0 25 0 67732.0 + 2376 AQMDYYGTRL 10 86 609.2846769784114 1216.5548010236228 2 609.2844726443291 MULTI CID FTMS 0 0 0 12163 322801.9375 0.1950546201019861 -2 0.1705894470214843 13 Unmodified _AQMDYYGTRL_ ENSG00000157020|ENST00000350697|SEC13;ENST00000397099.1_1_3:10357003-10360966:-|nuORF;ENST00000397102.5_1_3:10355120-10362775:-|nuORF;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 21.59015148037692 0.4836074274810599 3 [QA]MDYY{[SA]|[TG]}[R{I|L}] 10 0 [QA] + + 31.203 18.015 9.0484 2.5649 2.5649 49.463 0.0 0.0 0.0 0.0 15.00508444608478 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 + + [QA]MDYY{[SA]|[TG]}[R{I|L}] 2.5649 + + 56 + 1 1.377 65199.4 1.0 6767 5407 12163 HBL1_DMSO_200M_050219_1,12176 HBL1_DMSO_200M_050219_1,12176,AQMDYYGTRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12177 62.58 76.0 476740.0 25 0 20849.0 + -1 KMIEDLQNEL 10 82 624.8107361960945 1247.6069194589888 2 624.8097411990166 MULTI CID FTMS 0 0 0 12163 317451.59375 0.4447704791994312 -2 0.1705894470214843 14 Oxidation (M) _KM(Oxidation (M))IEDLQNEL_ ENSG00000198887|ENST00000361138|SMC5 24.881564428377168 0.4096545554397951 3 [AG]{M(Oxidation (M))|F}{I|L}ED{I|L}QNE{I|L} 11 -1 + 57.51 0.0 0.0 4.6096 4.6096 81.669 0.0 0.0 0.0 8.380333836359242 8.802663821573482 8.380333836359242 8.380333836359242 0 0.468765315847925 1.2218487496163564 0.0 0.3807196863200844 [AG]{M(Oxidation (M))|F}{I|L}ED{I|L}QNE{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}ED{I|L}QNE{I|L};[AG]{M(Oxidation (M))|F}{I|L}ED{I|L}QGGE{I|L};[{I|L}T]C{[TV]|[{I|L}S]}D{I|L}QNE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NQ{I|L}DE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[AG]{M(Oxidation (M))|F}{I|L}ED{I|L}[AG]NE{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}ED{I|L}QGGE{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}ED{I|L}[AG]NE{I|L};[{I|L}T]C{[TV]|[{I|L}S]}D{I|L}QGGE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[AG]{I|L}DE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 4.6096;3.9379;3.8779;3.65;3.6451;3.5728;3.2033;3.2033;2.9183;2.9105 -;+;-;-;-;-;-;-;-;- + 393 1 1.377 37837.0 1.0 6768 5407 12163 HBL1_DMSO_200M_050219_1,12177 HBL1_DMSO_200M_050219_1,12177,KMIEDLQNEL False False KMIEDLQNEL 62.579633 624.812 6497561.5 12163.0 ENSG00000198887|ENST00000361138|SMC5 5.78437614440918 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12178 62.592 729.0 572670.0 25 0 41362.0 + + 16235 VLARVAVPSA 10 269 491.8056983867276 981.5968438402552 2 491.8055908083916 MULTI CID FTMS 0 0 0 12163 261775.09375 0.4892601455678074 -2 0.1705894470214843 15 Unmodified _IVNRLLPSA_ ENST00000361256.9_1_9:131585006-131586171:-|nuORF 49.93300154707207 0.0405168250806675 3 [{I|L}V]{I|L}RN{I|L}PSA 9 -1 + 55.543 0.0 0.0 5.6584 5.6584 79.559 0.0 0.0 0.0 6.304790434670231 22.15198257135193 6.304790434670231 3.0102999566398125 0 1.4802046884880935 2.0 0.0 0.566901560044258 [{I|L}V]{I|L}RN{I|L}PSA;[{I|L}V]{I|L}RGG{I|L}PSA;[{I|L}V]{I|L}RQVPSA;[{I|L}V]{I|L}RGAVPSA;[{I|L}V]{I|L}RNP{I|L}SA;[{I|L}V]{I|L}RGGP{I|L}SA;[{I|L}V]{I|L}RNPTVA;[{I|L}V]{I|L}RQPEK;[{I|L}V]{I|L}RGGPTVA;[{I|L}V]{I|L}RQPVSA 5.6584;5.3517;5.0406;4.7339;4.5948;4.2881;4.1809;3.8999;3.8742;3.8191 -;-;-;-;-;-;-;-;-;- 6821 1 1.377 309321.5 1.0 6769 5407 12163 HBL1_DMSO_200M_050219_1,12178 HBL1_DMSO_200M_050219_1,12178,IVNRLLPSA False False VLARVAVPSA 62.592262 491.805590808392 4255474.5 12163.0 ENST00000361256.9_1_9:131585006-131586171:-|nuORF 0.1121873557567596 2.0 False 10.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12179 62.598 301.0 952840.0 25 0 103050.0 + 30975 RLAVYIDKV 9 185 538.827017460888 1075.639481988576 2 538.8270141482353 MULTI CID FTMS 0 0 0 12163 212417.84375 0.4195628057164827 -1 0.1234703063964843 16 Unmodified _RLAVYIDKV_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 89.40071534611396 0.0152361884002446 3 [{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}DKV 9 2 + 70.967 0.0 0.0 6.5976 6.5976 83.905 0.0 0.0 0.0 3.8168836088729705 12.284962570341309 3.8168836088729705 3.8168836088729705 0 1.9361818737241727 1.5228787452803376 0.0 1.2273473230428982 [{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}DKV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V{M(Oxidation (M))|F}{I|L}DKV;{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}{M(Oxidation (M))|F}{I|L}DKV;[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}YT[RV]V;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V{M(Oxidation (M))|F}T[RV]V;VK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}NP{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}{M(Oxidation (M))|F}T[RV]V;VK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}VQP{I|L};{NN|[MP]|[D{I|L}]|[EV]}KV{M(Oxidation (M))|F}T[RV]V;VK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}V[QP] 6.5976;6.2428;6.0951;3.0925;2.7376;2.6456;2.5899;2.4393;2.3984;2.364 -;-;-;-;-;-;-;-;-;- 2905 1 1.377 217727.0 1.0 6770 5407 12163 HBL1_DMSO_200M_050219_1,12179 HBL1_DMSO_200M_050219_1,12179,RLAVYIDKV True True RLAVYIDKV 62.597779 538.827014148235 3581307.5 12163.0 chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;;ENSG00000113368|ENST00000261366|LMNB1 5.60964822769165 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12180 62.607 507.0 642360.0 25 0 148640.0 18542 LAAAQRGH 8 252 412.23031496903735 822.4460770048747 2 412.2303039431572 MULTI CID FTMS 0 0 0 12163 212737.765625 0.1523661600722733 -9 0.862030029296875 17 Unmodified _LAAAQRGH_ ENST00000325285.7_2_9:139837107-139837825:-|nuORF;ENST00000459905.5_1_9:139837219-139837813:-|nuORF 6.354104778181461 0.7857632046190106 3 A 1 7 10.969 0.0 0.0 1.3337 0.0 0.0 733.397735185342 0.0 733.397735185342 0.0 1.5719697861098147 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 1.3337 + + 113 + 1 1.377 252332.4 1.0 6771 5407 12163 HBL1_DMSO_200M_050219_1,12180 HBL1_DMSO_200M_050219_1,12180,LAAAQRGH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12181 62.613 378.0 668900.0 25 0 44823.0 + 29980 QTAKEFIKI 9 225 359.88120274619735 1076.621778838792 3 359.8806640505791 MULTI CID FTMS 0 0 0 12163 159340.3125 0.9050486884631492 1 -0.0892906188964843 18 Unmodified _QTAKEFIKI_ ENSG00000116489|ENST00000263168|CAPZA1;ENSG00000198898|ENST00000361183|CAPZA2;ENST00000426421.5_1_7:116544367-116557918:+|nuORF;ENST00000466066.1_1_1:113202257-113212751:+|nuORF 20.453626601364224 0.2830276176381075 3 {I|L}Y{I|L}CV 5 8 14.068 0.0 0.0 1.3067 0.0 0.0 145.09697249393247 337.1985909331505 482.295563427083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y{I|L}CV 1.3067 - 877 + 1 1.377 203147.3 1.0 6772 5407 12163 HBL1_DMSO_200M_050219_1,12181 HBL1_DMSO_200M_050219_1,12181,QTAKEFIKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12182 62.629 800.0 336350.0 25 0 15566.0 + 43371 WPYGNRQEI 9 219 581.7858856037438 1161.5572182742876 2 581.7853271365166 MULTI CID FTMS 0 0 0 12163 153433.203125 0.5273475490594638 2 -0.1885108947753906 19 Unmodified _WPYGNRQEI_ ENSG00000119392|ENST00000309971|GLE1;nc|ENSG00000119392|Q53GS7-2|GLE1 43.85829265575387 0.0542763391141878 3 WPYK 4 6 59.87 0.0 0.0 5.1543 0.0 0.0 0.0 584.2599581354124 584.2599581354124 31.854100380740164 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.0 0.8539171939081173 WPYK 5.1543 - 4179 + 1 1.377 201974.4 0.9800000190734864 6773 5407 12163 HBL1_DMSO_200M_050219_1,12182 HBL1_DMSO_200M_050219_1,12182,WPYGNRQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12183 62.634 320.0 358090.0 25 0 33049.0 -1 YAGCFTQC 8 146 475.1788173509196 948.3430817686392 2 475.1792175173759 MULTI CID FTMS 0 0 0 12163 122485.6484375 1.0 0 0.0 20 Carbamidomethyl (C) _YAGC(Carbamidomethyl (C))FTQC_ ENSG00000254834|ENST00000526538|OR5M10;ENSG00000255012|ENST00000641076|OR5M1 2.889219685676258 0.8067950007271085 3 A{I|L} 2 -1 16.454 0.0 0.0 1.735 0.0 0.0 746.2110149735205 0.0 746.2110149735205 0.0 6.075046625430254 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L} 1.735 - 283 + 1 1.377 91436.2 1.0 6774 5407 12163 HBL1_DMSO_200M_050219_1,12183 HBL1_DMSO_200M_050219_1,12183,YAGCFTQC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12185 62.639 60.0 757450.0 25 0 49343.0 + 5894 DPYKVYRIV 9 72 384.8851537633373 1151.633631890212 3 384.8851196169853 MULTI CID FTMS 0 0 0 12184 563359.125 0.0269336799650802 5 -0.3544692993164062 1 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 24.020572477871973 0.2255576514309169 3 DPYKVY[R{I|L}]V 9 0 + 62.898 0.0 0.0 5.4616 5.4616 89.919 0.0 0.0 0.0 51.78842824069392 0.2018122933698407 0.2018122933698407 41.524947271955455 0 0.3054621874040891 1.6989700043360187 0.0 0.0 + + DPYKVY[R{I|L}]V;[DP][{I|L}P]{I|L}{I|L}KY{[HG]|PP} 5.4616;1.8559 +;- + 53 + 1 1.377 47672.4 1.0 6775 5408 12184 HBL1_DMSO_200M_050219_1,12185 HBL1_DMSO_200M_050219_1,12185,DPYKVYRIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12186 62.653 800.0 451190.0 25 0 101620.0 + -1 MRCEEGELL 9 116 1095.4836243471725 1094.4763478805723 1 1095.481616199017 MULTI CID FTMS 0 0 0 12184 102934.1640625 0.9995148675827464 1 -0.0992202758789062 2 Oxidation (M) _M(Oxidation (M))RCEEGELL_ REV__CON__P07744;REV__CON__P35908;REV__CON__P35908v2;REV__CON__Q01546;REV__CON__Q32MB2;REV__CON__Q3TTY5;REV__CON__Q6NXH9;REV__CON__Q7RTS7;REV__CON__Q7RTT2;REV__CON__Q8N1N4-2;REV__ENSG00000170423|ENST00000304620|KRT78;REV__ENSG00000170484|ENST00000305620|KRT74;REV__ENSG00000172867|ENST00000309680|KRT2;REV__ENSG00000185069|ENST00000332411|KRT76;REV__ENSG00000186049|ENST00000305748|KRT73;REV__nc|ENSG00000170423|Q8N1N4-2|KRT78 24.020572477871973 0.2255576514309169 3 AH{I|L}Y{I|L}NH{I|L} 8 -1 43.114 0.0 0.0 3.9392 0.0 0.0 114.9500460993889 0.0 114.9500460993889 0.0 14.697573854007032 0.0 0.0 0 0.2302046884880937 0.0 0.0 1.0941876774005248 AH{I|L}Y{I|L}NH{I|L} 3.9392 - 1855 + 1 1.377 224910.2 0.8500000238418579 6776 5408 12184 HBL1_DMSO_200M_050219_1,12186 HBL1_DMSO_200M_050219_1,12186,MRCEEGELL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12187 62.654 8.9 6366400.0 25 0 1084100.0 + 3763 DAHIYLNHI 9 77 548.282804762219 1094.551056591238 2 548.2830078005791 MULTI CID FTMS 0 0 0 12184 5958775.0 0.1794325441556532 -3 0.2598800659179687 3 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 87.25819977447905 0.0157581688916699 3 {[DA]|[EG]}H{I|L}{I|L}YNH{I|L} 9 2 + 96.641 0.0 0.0 8.8293 8.8293 89.253 0.0 0.0 0.0 5.528871982441359 4.420080530223132 4.420080530223132 4.420080530223132 0 2.774227503252014 1.0969100130080565 0.0 1.5356668758921828 {[DA]|[EG]}H{I|L}{I|L}YNH{I|L};{[DA]|[EG]}H{I|L}{I|L}YN{I|L}H;{[DA]|[EG]}H{I|L}Y{I|L}NH{I|L};[H{I|L}]DAY{I|L}NH{I|L};{[DA]|[EG]}H{I|L}Y{I|L}GGH{I|L};[HA]D{I|L}Y{I|L}NH{I|L};[H{I|L}]DAY{I|L}GGH{I|L};{[DA]|[EG]}H{I|L}{I|L}YGGH{I|L};[HA]D{I|L}Y{I|L}GGH{I|L};{[DA]|[EG]}H{I|L}{I|L}YGG{I|L}H 8.8293;8.4255;8.3242;7.566;7.4829;7.2544;6.7248;6.585;6.4131;6.1812 -;-;+;-;-;-;-;-;-;- + 521 + 1 1.377 50434.0 1.0 6777 5408 12184 HBL1_DMSO_200M_050219_1,12187 HBL1_DMSO_200M_050219_1,12187,DAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12188 62.655 17.0 4026800.0 25 0 459570.0 + 3403 AYVHMVTHF 9 78 368.8480161269438 1103.5222189810313 3 368.8481017947197 MULTI CID FTMS 0 0 0 12184 2468111.0 0.0502492478628539 -3 0.2598800659179687 4 Unmodified _AYVHMVTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 26.88365393820708 0.1891292719743517 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}SHP{M(Oxidation (M))|F} 9 3 + 51.353 0.0 0.0 4.6535 4.6535 72.115 0.0 0.0 0.0 23.46024470058502 6.214782044987928 6.214782044987928 0.5284196865778057 0 0.2742275032520141 2.0 0.5 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}SHP{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMV[HT]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{[{M(Oxidation (M))|F}H]|[RQ]}SP{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NP{M(Oxidation (M))|F};[HV]W[NP]HVDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GGP{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HK]{NN|[MP]|[D{I|L}]|[EV]}NP{M(Oxidation (M))|F};[YV]N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HVDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{[{M(Oxidation (M))|F}H]|[RQ]}{[HG]|PP}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HK][PG]TSP{M(Oxidation (M))|F} 4.6535;4.6057;3.2064;3.2064;2.5024;2.372;2.3476;2.3014;2.2764;2.2124 -;+;-;-;-;-;-;-;-;- + 276 + 1 1.377 59619.5 1.0 6778 5408 12184 HBL1_DMSO_200M_050219_1,12188 HBL1_DMSO_200M_050219_1,12188,AYVHMVTHF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12189 62.656 53.0 1181200.0 25 0 120810.0 -1 YMIDPSGVSY 10 95 574.2523528855575 1146.4901528379148 2 574.2527343630791 MULTI CID FTMS 0 0 0 12184 1193636.5 0.1690884441087773 -4 0.392730712890625 5 Oxidation (M) _YM(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 32.30548876998284 0.2428506522065767 3 {[{M(Oxidation (M))|F}C]|[YS]}[WD]D{I|L}VSY 9 -1 {[{M(Oxidation (M))|F}C]|[YS]}[WD]D{I|L}V + + 29.464 4.6704 0.5317 2.5699 2.5699 49.469 0.0 0.0 0.0 0.0 12.284700126913393 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 {[{M(Oxidation (M))|F}C]|[YS]}[WD]D{I|L}VSY 2.5699 - 189 + 1 1.377 52792.0 1.0 6779 5408 12184 HBL1_DMSO_200M_050219_1,12189 HBL1_DMSO_200M_050219_1,12189,YMIDPSGVSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12190 62.657 27.0 2563000.0 25 0 255740.0 + 3406 AYVHMVTHF 9 102 552.7677589148686 1103.5209648965372 2 552.7651855349541 MULTI CID FTMS 0 0 0 12184 1037677.5 0.0378632747462134 -3 0.2598800659179687 6 Unmodified _AYVHMVTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 57.47134341890925 0.0274820932774257 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMVTH{M(Oxidation (M))|F} 9 0 + 64.147 0.0 0.0 5.8129 5.8129 88.564 0.0 0.0 0.0 30.42165612183765 6.210149894766701 6.210149894766701 11.576447055154516 0 2.004432191740108 2.0 0.0 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMVTH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMVW[QA];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHM{[{M(Oxidation (M))|F}H]|[RQ]}TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{[{M(Oxidation (M))|F}H]|[RQ]}MTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMV{[QG]|[NA]}{[CP]|[EA]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMV{[DA]|[EG]}[QA];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}[YG]TH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV]YHVDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}HHMTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{[{M(Oxidation (M))|F}H]|[RQ]}[PS]{M(Oxidation (M))|F} 5.8129;4.7639;4.6148;4.1565;4.089;3.9295;3.8653;3.8162;3.5479;3.2949 +;-;-;-;-;-;-;-;-;- + 503 + 1 1.377 58304.1 1.0 6780 5408 12184 HBL1_DMSO_200M_050219_1,12190 HBL1_DMSO_200M_050219_1,12190,AYVHMVTHF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12191 62.66 97.0 2413800.0 25 0 475140.0 -1 0 123 304.1944870166417 606.3744211000834 2 304.1941711306572 MULTI CID FTMS 0 0 0 12184 733051.9375 0.1748959615733318 -3 0.2598800659179687 7 3 YA{I|L}{I|L}K 5 -1 + 59.743 0.0 0.0 9.8524 9.8524 88.281 0.0 0.0 0.0 32.028937514676485 3.055127060501846 3.055127060501846 3.055127060501846 0 0.4247425010840047 1.6989700043360187 0.0 0.3970950735091925 YA{I|L}{I|L}K;YA{I|L}K{I|L};Y{I|L}A{I|L}K;Y{I|L}AK{I|L};{I|L}YA{I|L}K;{I|L}YAK{I|L};[{I|L}A]K{I|L}Y;[K{I|L}]{I|L}AY;[K{I|L}]A{I|L}Y 9.8524;9.3486;5.1909;4.6871;4.5704;4.0666;3.5147;2.8773;2.6363 -;-;-;-;-;-;-;-;- 86 + 1 1.377 194250.0 1.0 6781 5408 12184 HBL1_DMSO_200M_050219_1,12191 HBL1_DMSO_200M_050219_1,12191, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12192 62.663 202.0 899210.0 25 0 68569.0 + 3842 DAIYSVHV 8 171 452.2318817379672 902.4492105427344 2 452.2320434451103 MULTI CID FTMS 0 0 0 12184 608947.6875 0.942729853441487 -3 0.2598800659179687 8 Unmodified _DAIYSVHV_ ENSG00000108262|ENST00000225394|GIT1;ENST00000473217.5_1_17:27902646-27905994:-|nuORF;nc|ENSG00000108262|Q9Y2X7-3|GIT1 46.92087301778293 0.1537303740847981 3 {[DA]|[EG]}{I|L}YSVHV 8 0 + 52.904 0.0 0.0 5.8623 5.8623 88.075 0.0 0.0 0.0 22.962204845570824 9.378520932511556 9.378520932511556 9.378520932511556 0 0.6747425010840047 2.0 0.2614393726401688 0.0 + + {[DA]|[EG]}{I|L}YSVHV;{[DA]|[EG]}{I|L}YSVVH;{[DA]|[EG]}{I|L}[NG]{M(Oxidation (M))|F}PAV;{[DA]|[EG]}{I|L}[QT]WAV;{[DA]|[EG]}{I|L}YHTA{I|L};{[DA]|[EG]}{I|L}[NG]{M(Oxidation (M))|F}PG{I|L};{[DA]|[EG]}{I|L}[QT]WG{I|L};W[WR]WAV;[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[TP]HV;{[DA]|[EG]}{I|L}[NG]VVC{I|L} 5.8623;4.823;3.7216;3.6461;3.2739;2.9977;2.9223;1.1133;1.1056;1.0826 +;-;-;-;-;-;-;-;-;- + 558 + 1 1.377 142524.5 1.0 6782 5408 12184 HBL1_DMSO_200M_050219_1,12192 HBL1_DMSO_200M_050219_1,12192,DAIYSVHV False True DAIYSVHV 62.663422 452.2323 5761269.5 12184.0 ENST00000473217.5_1_17:27902646-27905994:-|nuORF;;ENSG00000108262|ENST00000225394|GIT1;;nc|ENSG00000108262|Q9Y2X7-3|GIT1 4.037381807963054 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12193 62.667 173.0 425010.0 25 0 29606.0 + 40479 VIPVNVPEA 9 103 469.2715476780746 936.5285424229492 2 469.2711974978447 MULTI CID FTMS 0 0 0 12184 290087.3125 0.1523456198981219 -3 0.2598800659179687 9 Unmodified _VIPVNVPEA_ ENSG00000136628|ENST00000366923|EPRS1 28.486842064014134 0.1687311288560894 3 [VP]NV{I|L}V 6 5 33.624 0.0 0.0 3.5903 0.0 0.0 0.0 312.12171804234305 312.12171804234305 12.0576784326476 0.0 0.0 0.0 0 0.75 0.9208187539523752 0.0 0.3807196863200844 [VP]NV{I|L}V 3.5903 - 202 1 1.377 62164.6 1.0 6783 5408 12184 HBL1_DMSO_200M_050219_1,12193 HBL1_DMSO_200M_050219_1,12193,VIPVNVPEA False False VIPVNVPEA 62.666786 469.271197497845 9965960.0 12184.0 ENSG00000136628|ENST00000366923|EPRS1 2.8361622095108032 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12194 62.67 146.0 626350.0 25 0 57004.0 + 35847 SVLEDPVHAV 10 115 533.2834375513046 1064.552322169409 2 533.2834960818291 MULTI CID FTMS 0 0 0 12184 245293.34375 0.1474756103261581 -3 0.2598800659179687 10 Unmodified _SVLEDPVHAV_ ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1 37.97399986684836 0.1789611706409123 3 [VS]{I|L}ED[VP]HAV 10 0 + 56.426 0.0 0.0 5.3004 5.3004 76.742 0.0 0.0 0.0 25.1610952717429 5.517764030664729 5.517764030664729 1.9836765376683367 0 0.7742275032520141 2.0 0.3054621874040891 0.0 + + [VS]{I|L}ED[VP]HAV;[VS]{I|L}ED[HA]VPV;[VS]{I|L}ED[VP]HG{I|L};[VS]{I|L}[{M(Oxidation (M))|F}V]AD{I|L}CV;[VS]{I|L}[{M(Oxidation (M))|F}V]AS{M(Oxidation (M))|F}PV;[{I|L}V]T[HA]DE{I|L}[PA];[VS]{I|L}[{M(Oxidation (M))|F}V]DA{I|L}CV;[VS]{I|L}E[MT]SVTV;[VS]{I|L}TEA[{I|L}T][MT];{[TV]|[{I|L}S]}{I|L}[HA]DE{I|L}[PA] 5.3004;5.1141;4.715;4.3831;4.1015;3.9601;3.9349;3.9019;3.8374;3.4796 +;-;-;-;-;-;-;-;-;- + 3680 + 1 1.377 76820.1 1.0 6784 5408 12184 HBL1_DMSO_200M_050219_1,12194 HBL1_DMSO_200M_050219_1,12194,SVLEDPVHAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12195 62.684 800.0 350350.0 25 0 28505.0 + 43647 YAPINANAI 9 260 473.7524944749774 945.4904360167548 2 473.7520934939384 MULTI CID FTMS 0 0 0 12184 217272.84375 1.0 0 0.0 11 Unmodified _YAPINANAI_ ENSG00000149480|ENST00000278823|MTA2;nc|ENSG00000149480|O94776-2|MTA2 40.44857923139169 0.0729940656229577 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC{I|L}[NP]{I|L} 9 4 AC{I|L}[NP]{I|L} + + 23.952 10.895 1.7823 2.5333 2.5333 49.418 0.0 0.0 0.0 -0.1946344275718559 0.0 -0.1946344275718559 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC{I|L}[NP]{I|L} 2.5333 - 2560 1 1.377 209184.6 0.9900000095367432 6785 5408 12184 HBL1_DMSO_200M_050219_1,12195 HBL1_DMSO_200M_050219_1,12195,YAPINANAI True True YAPINANAI 62.68353 473.752093493938 2092411.25 12184.0 ENSG00000149480|ENST00000278823|MTA2;;nc|ENSG00000149480|O94776-2|MTA2 3.553966442743937 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12196 62.688 239.0 695660.0 25 0 61065.0 + 37267 TIPDGGVHIV 10 172 504.27945348037 1006.54435402754 2 504.2796203494072 MULTI CID FTMS 0 0 0 12184 204272.5625 0.5166783056625592 2 -0.1491127014160156 12 Unmodified _TIPDGGVHIV_ ENSG00000244462|ENST00000374114|RBM12;ENST00000352393.8_2_20:34220804-34246883:-|nuORF;ENST00000440240.5_1_20:34220804-34252800:-|nuORF;ENST00000454607.5_1_20:34220607-34246883:-|nuORF 42.09456458481378 0.1354489350322421 3 [{I|L}T]PDGRH 7 4 46.573 0.0 0.0 4.627 0.0 0.0 0.0 227.14011560611564 227.14011560611564 9.014778379785888 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.3252574989159953 [{I|L}T]PDGRH 4.627 - 836 + 1 1.377 124505.5 1.0 6786 5408 12184 HBL1_DMSO_200M_050219_1,12196 HBL1_DMSO_200M_050219_1,12196,TIPDGGVHIV False True TIPDGGVHIV 62.687997 504.279620349407 7142123.0 12184.0 ENST00000454607.5_1_20:34220607-34246883:-|nuORF;;ENST00000440240.5_1_20:34220804-34252800:-|nuORF;;ENSG00000244462|ENST00000374114|RBM12;;ENST00000352393.8_2_20:34220804-34246883:-|nuORF 6.243536790211995 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12197 62.691 145.0 421170.0 25 0 31661.0 + 3912 DALEKIKAI 9 109 334.2062686936964 999.5969766812892 3 334.2064391970634 MULTI CID FTMS 0 0 0 12184 187175.890625 0.903729215673568 1 -0.0992202758789062 13 Unmodified _DALEKIKAI_ ENSG00000130177|ENST00000356221|CDC16;nc|ENSG00000130177|Q13042-2|CDC16;nc|ENSG00000130177|Q13042-3|CDC16;nc|ENSG00000130177|Q13042-4|CDC16 32.30548876998284 0.1201446275138228 3 EK{I|L}KA{I|L} 6 3 20.839 0.0 0.0 2.0848 0.0 0.0 299.14752707367035 0.0 299.14752707367035 0.0 9.729881656167125 0.0 0.0 0 0.0 0.0 0.5 0.0 + EK{I|L}KA{I|L} 2.0848 + + 40 + 1 1.377 55419.4 1.0 6787 5408 12184 HBL1_DMSO_200M_050219_1,12197 HBL1_DMSO_200M_050219_1,12197,DALEKIKAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12198 62.693 91.0 654080.0 25 0 46942.0 + -1 GPAERCMSL 9 106 510.73519197882905 1019.455831024458 2 510.7365905642509 MULTI CID FTMS 0 0 0 12184 180074.890625 0.02073822370197 7 -0.4902381896972656 14 Carbamidomethyl (C) _GPAERC(Carbamidomethyl (C))MSL_ REV__ENSG00000160993|ENST00000292566|ALKBH4 10.823927491677226 0.5436922275383211 3 TV 2 -1 14.838 0.0 0.0 1.4555 0.0 0.0 801.3291658406675 0.0 801.3291658406675 0.0 1.3428674503281537 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 TV 1.4555 - 207 + 1 1.377 53041.1 1.0 6788 5408 12184 HBL1_DMSO_200M_050219_1,12198 HBL1_DMSO_200M_050219_1,12198,GPAERCMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12199 62.707 740.0 193440.0 25 0 7049.0 + -1 VWGPLCRCSF 10 145 641.2958643833033 0 641.2953979372978 PEAK CID FTMS 0 0 0 12184 162298.6875 0.8449116057606921 1 -0.0992202758789062 15 2 Carbamidomethyl (C) _VWGPLC(Carbamidomethyl (C))RC(Carbamidomethyl (C))SF_ REV__ENSG00000142449|ENST00000600128|FBN3 16.942295170755138 0.3221497226927513 3 STV 3 -1 17.945 0.0 0.0 1.4013 0.0 0.0 805.3673807668034 185.03957544498283 990.4069562117862 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8252574989159953 0.0 STV 1.4013 - 376 + 1 1.377 111804.1 1.0 6789 5408 12184 HBL1_DMSO_200M_050219_1,12199 HBL1_DMSO_200M_050219_1,12199,VWGPLCRCSF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12200 62.72 751.0 146990.0 25 0 6631.5 -1 VFEDSIVCCIN 11 159 678.301484734093 1354.588416534986 2 678.3024169802666 MULTI CID FTMS 0 0 0 12184 134950.28125 1.0 0 0.0 16 2 Carbamidomethyl (C) _VFEDSIVC(Carbamidomethyl (C))C(Carbamidomethyl (C))IN_ ENSG00000157423|ENST00000393567|HYDIN;ENST00000309900.11_1_16:70928350-70955090:-|nuORF 6.2057823575117 0.8458686499021061 3 {[QD]|[EN]|[WG]|[KD]|[RS]}HQ[CS]{I|L}QV 9 -1 15.596 0.0 0.0 1.1513 0.0 0.0 0.0 313.1280643223485 313.1280643223485 1.8550931673073023 0.0 0.0 0.0 0 0.0 0.0 0.5 0.4247425010840047 {[QD]|[EN]|[WG]|[KD]|[RS]}HQ[CS]{I|L}QV 1.1513 - 1562 1 1.377 83781.7 1.0 6790 5408 12184 HBL1_DMSO_200M_050219_1,12200 HBL1_DMSO_200M_050219_1,12200,VFEDSIVCCIN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12201 62.734 800.0 371690.0 25 0 32935.0 + 17972 KRKGGGGG 8 284 358.7130866188079 715.4116203044158 2 358.7131530642509 MULTI CID FTMS 0 0 0 12184 115345.453125 0.8453923647148835 1 -0.0992202758789062 17 Unmodified _KRKGGGGG_ REV__ENSG00000105675|ENST00000262623|ATP4A;REV__ENST00000244776.11_1_6:18258274-18264769:-|nuORF;REV__ENST00000397239.7_1_6:18258274-18264769:-|nuORF;REV__ENST00000505224.5_1_6:18258244-18264760:-|nuORF;REV__ENST00000515742.1_3_6:18258274-18264279:-|nuORF 0.0 0.8243325171867699 3 D{I|L} 2 -1 19.442 0.0 0.0 2.7176 0.0 0.0 469.2898837094924 0.0 469.2898837094924 0.0 11.070006276765485 0.0 0.0 0 0.4247425010840047 0.0 0.2887254899964357 0.0 D{I|L} 2.7176 - 172 + 1 1.377 229819.4 0.6000000238418579 6791 5408 12184 HBL1_DMSO_200M_050219_1,12201 HBL1_DMSO_200M_050219_1,12201,KRKGGGGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12203 62.738 10.0 5404700.0 25 0 544600.0 + 24897 MPNTRPPII 9 73 519.791667430783 1037.568781928366 2 519.7922851443291 MULTI CID FTMS 0 0 0 12202 5341461.0 0.4910711100797965 4 -0.2552490234375 1 Unmodified _MPNTRPPII_ ENSG00000084774|ENST00000264705|CAD 49.93300154707207 0.0405168250806675 3 MPNTRP[{I|L}P]{I|L} 9 0 + 75.244 0.0 0.0 7.2519 7.2519 91.46 0.0 0.0 0.0 49.83751337278648 6.2320847055354704 6.2320847055354704 9.208187539523747 0 0.8807196863200843 1.6989700043360187 0.4247425010840047 0.3807196863200844 + + MPNTRP[{I|L}P]{I|L};MPGGTRP[{I|L}P]{I|L} 7.2519;6.3644 +;- + 93 + 1 1.383 48079.3 1.0 6792 5409 12202 HBL1_DMSO_200M_050219_1,12203 HBL1_DMSO_200M_050219_1,12203,MPNTRPPII True True MPNTRPPII 62.737896 519.792285144329 1151801280.0 12202.0 ENSG00000084774|ENST00000264705|CAD 7.433961073557536 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12204 62.739 16.0 3703300.0 25 0 351850.0 + 45600 GDAYPNGLQV 10 91 517.2510535728634 1032.487554212527 2 517.2515136599541 MULTI CID FTMS 0 0 0 12202 3326998.75 0.8920041197897368 -1 0.0992202758789062 2 Unmodified _YVHMVTHF_ ENSG00000117298|ENST00000374893|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF 26.34127834903884 0.4900704351052977 3 [YV]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[YT]QV 8 4 + 25.072 0.0 0.0 2.4283 2.4283 75.597 0.0 0.0 0.0 7.641865279118786 2.0074990971912925 2.0074990971912925 6.977437731477426 0 0.0 1.0969100130080565 0.3494850021680094 0.3494850021680094 [YV]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[YT]QV;{[QV]|[N{I|L}]|[RA]|[KV]}GPQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]HM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QV;[YV]HMVT{[{M(Oxidation (M))|F}H]|[RQ]};{[QV]|[N{I|L}]|[RA]|[KV]}GP[AG]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QD]|[EN]|[WG]|[KD]|[RS]}Y{[QV]|[N{I|L}]|[RA]|[KV]}P{[{M(Oxidation (M))|F}H]|[RQ]};{[QD]|[EN]|[WG]|[KD]|[RS]}RM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QV;{[QD]|[EN]|[WG]|[KD]|[RS]}[QA]V[{M(Oxidation (M))|F}V]QV 2.4283;1.7525;1.5753;1.0769;0.86066;0.33134;0.22133;0.19705 -;-;-;+;-;-;-;- + 261 + 1 1.383 51686.3 1.0 6793 5409 12202 HBL1_DMSO_200M_050219_1,12204 HBL1_DMSO_200M_050219_1,12204,YVHMVTHF False True GDAYPNGLQV 62.739073 517.251513659954 57752200.0 12202.0 ENSG00000117298|ENST00000374893|ECE1;;nc|ENSG00000117298|P42892-3|ECE1;;nc|ENSG00000117298|P42892-4|ECE1;;ENST00000526194.5_1_1:21560049-21616919:-|nuORF 5.151405811309815 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12205 62.74 34.0 2221700.0 25 0 381560.0 + 15638 IQIMKVEEI 9 108 559.8091176463107 1117.603682359421 2 559.8101074099541 MULTI CID FTMS 0 0 0 12202 1698744.0 0.933815602581518 -1 0.0992202758789062 3 Oxidation (M) _IQIM(Oxidation (M))KVEEI_ ENSG00000105640|ENST00000222247|RPL18A;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 60.07390631473393 0.0260411565414776 3 [Q{I|L}]{M(Oxidation (M))|F}VEE[Q{I|L}]{I|L} 9 4 + 69.231 0.0 0.0 6.1946 6.1946 87.142 0.0 0.0 0.0 15.197180143148614 44.96584697476848 15.197180143148614 8.590671722280234 0 0.9247425010840048 1.0 0.7302046884880937 0.3807196863200844 [Q{I|L}]{M(Oxidation (M))|F}VEE[Q{I|L}]{I|L};[Q{I|L}]{I|L}{M(Oxidation (M))|F}PT{I|L}{[CA]|SS}{I|L};[Q{I|L}]{I|L}{M(Oxidation (M))|F}PT{[WT]|[RM]}{I|L};[Q{I|L}]{M(Oxidation (M))|F}VE[VP]{[CA]|SS}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVEE[Q{I|L}]{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VEE[Q{I|L}]{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{I|L}EE[Q{I|L}]{I|L};[Q{I|L}]{I|L}[TP]{M(Oxidation (M))|F}{I|L}{[CA]|SS}{I|L};[Q{I|L}]{I|L}[TP]{M(Oxidation (M))|F}{[WT]|[RM]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVE[VP]{[CA]|SS}{I|L} 6.1946;5.4259;5.1108;5.0579;4.2184;3.973;3.7037;3.5701;3.255;3.0818 -;-;-;-;-;-;-;-;-;- 1161 1 1.383 62170.3 1.0 6794 5409 12202 HBL1_DMSO_200M_050219_1,12205 HBL1_DMSO_200M_050219_1,12205,IQIMKVEEI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12206 62.741 29.0 1554800.0 25 0 86168.0 + 8111 EPHQVYVQI 9 72 556.7899292640104 1111.5653055948208 2 556.7907592654228 MULTI CID FTMS 0 0 0 12202 1521929.625 0.4601391335212725 -2 0.1885108947753906 4 Unmodified _EPHQVYVQI_ ENSG00000085840|ENST00000371568|ORC1 49.93300154707207 0.0405168250806675 3 {[QV]|[N{I|L}]|[RA]|[KV]}HPEYVQ{I|L} 9 4 + 48.408 0.0 0.0 4.3549 4.3549 71.591 0.0 0.0 0.0 0.7918124604762511 5.295000083553205 0.7918124604762511 0.7918124604762511 0 0.5994850021680094 0.0 1.274227503252014 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}HPEYVQ{I|L};[HQ]VPEYVQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}HYPEVQ{I|L};[HQ]VYPEVQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}HPYEVQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VYE{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};[HQ]VPYEVQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VYE{[DS]|[MA]|[CV]|TT}Q{I|L};[YV][HQ]PEVQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VEY{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L} 4.3549;4.2837;4.1759;4.1047;3.9051;3.8786;3.8339;3.7685;3.471;3.4288 -;-;-;-;-;-;-;-;-;- 522 1 1.383 41924.0 1.0 6795 5409 12202 HBL1_DMSO_200M_050219_1,12206 HBL1_DMSO_200M_050219_1,12206,EPHQVYVQI True True EPHQVYVQI 62.741432 556.790759265423 20880748.0 12202.0 ENSG00000085840|ENST00000371568|ORC1 5.614706357320149 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12207 62.743 26.0 2425500.0 25 0 376800.0 + -1 SLEQMAETF 9 94 536.2383766930559 1070.4622004529117 2 536.2408935427666 MULTI CID FTMS 0 0 0 12202 1228664.625 0.4983392438547916 2 -0.1451530456542968 5 Oxidation (M) _SLEQM(Oxidation (M))AETF_ REV__ENSG00000214694|ENST00000409978|ARHGEF33;REV__nc|ENSG00000214694|A8MVX0|ARHGEF33 19.256988751693697 0.3154191944385105 3 {[TV]|[{I|L}S]}DPTE 6 -1 43.817 0.0 0.0 4.0933 0.0 0.0 0.0 425.1358814433992 425.1358814433992 24.82107120654604 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}DPTE 4.0933 - 424 1 1.383 55102.2 1.0 6796 5409 12202 HBL1_DMSO_200M_050219_1,12207 HBL1_DMSO_200M_050219_1,12207,SLEQMAETF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12208 62.744 38.0 1334100.0 25 0 100940.0 + 16440 KAIDIYEQV 9 86 539.7927276481686 1077.570902363137 2 539.7932617068291 MULTI CID FTMS 0 0 0 12202 1112472.75 0.3597161260970903 -2 0.1885108947753906 6 Unmodified _KAIDIYEQV_ ENSG00000105402|ENST00000263354|NAPA;ENST00000597778.5_1_19:47995938-47996286:-|nuORF 38.17557092003332 0.0854718145212029 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}]{I|L}D{I|L}N 8 7 38.893 0.0 0.0 3.6093 0.0 0.0 0.0 82.0670412652953 82.0670412652953 23.99797211252192 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.3807196863200844 0.3252574989159953 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}]{I|L}D{I|L}N 3.6093 - 206 + 1 1.383 44649.8 1.0 6797 5409 12202 HBL1_DMSO_200M_050219_1,12208 HBL1_DMSO_200M_050219_1,12208,KAIDIYEQV True True KAIDIYEQV 62.743788 539.793261706829 35283156.0 12202.0 ENST00000597778.5_1_19:47995938-47996286:-|nuORF;;ENSG00000105402|ENST00000263354|NAPA 5.204091469446818 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12209 62.745 33.0 1444600.0 25 0 175510.0 + 10768 FYNGPVSKF 9 69 529.7688963196476 1057.5232397060952 2 529.7695190310478 MULTI CID FTMS 0 0 0 12202 1062435.875 0.850792686344854 -2 0.1885108947753906 7 Unmodified _FYNGPVSKF_ ENSG00000170522|ENST00000302274|ELOVL6 24.99096001346401 0.2132109383330889 3 [VP]PS[RP]NYE 9 8 + 44.376 0.0 0.0 4.1962 4.1962 81.797 0.0 0.0 0.0 3.97022398111794 32.593110190093014 3.97022398111794 9.208187539523747 0 0.4247425010840047 0.8239087409443188 0.0 0.3807196863200844 [VP]PS[RP]NYE;[VP]PS[RP]GGYE;{M(Oxidation (M))|F}YNG{I|L}{I|L}[KG]{M(Oxidation (M))|F};[VP]P{[CT]|[{M(Oxidation (M))|F}G]}[H{I|L}]YE;[Y{M(Oxidation (M))|F}][{I|L}V][QP]YE 4.1962;3.3255;3.0841;2.0631;1.935 -;-;-;-;- 134 1 1.383 41470.6 1.0 6798 5409 12202 HBL1_DMSO_200M_050219_1,12209 HBL1_DMSO_200M_050219_1,12209,FYNGPVSKF False True FYNGPVSKF 62.744967 529.769519031048 9423392.0 12202.0 ENSG00000170522|ENST00000302274|ELOVL6 7.9113114674886065 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12210 62.746 31.0 1452900.0 25 0 227250.0 -1 0 75 434.24358628486095 433.23630981826096 1 434.2436096072197 MULTI CID FTMS 0 0 0 12202 1080404.375 0.2535939354115011 -7 0.7371063232421875 8 3 Y 1 -1 1.42 0.0 0.0 0.32776 0.0 0.0 56.493372661814085 210.65871606998283 267.15208873179694 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.32776 - 3 + 1 1.383 43001.0 1.0 6799 5409 12202 HBL1_DMSO_200M_050219_1,12210 HBL1_DMSO_200M_050219_1,12210, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12211 62.748 68.0 1335500.0 25 0 133330.0 -1 VAEDRDYM 8 102 507.7145784483955 1013.414603963591 2 507.7145873904228 MULTI CID FTMS 0 0 0 12202 969567.4375 1.0 0 0.0 9 Oxidation (M) _VAEDRDYM(Oxidation (M))_ ENSG00000186472|ENST00000333891|PCLO;nc|ENSG00000186472|Q9Y6V0-6|PCLO 9.347437153973935 0.7675937258251505 3 VDQ 3 -1 31.427 0.0 0.0 3.1011 0.0 0.0 0.0 668.2286471002561 668.2286471002561 3.424005240709036 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7614393726401688 VDQ 3.1011 - 152 + 1 1.383 77602.8 1.0 6800 5409 12202 HBL1_DMSO_200M_050219_1,12211 HBL1_DMSO_200M_050219_1,12211,VAEDRDYM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12212 62.749 54.0 916820.0 25 0 132840.0 -1 PIKPCISV 8 85 457.2640638459234 912.5135747586468 2 457.2645751833916 MULTI CID FTMS 0 0 0 12202 668197.4375 0.3685182292305787 -3 0.311981201171875 10 Carbamidomethyl (C) _PIKPC(Carbamidomethyl (C))ISV_ ENST00000560658.5_1_15:31360240-31362382:-|nuORF 10.183394434864962 0.7604730176254005 3 V 1 -1 11.594 0.0 0.0 1.2705 0.0 0.0 795.4340363448758 0.0 795.4340363448758 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2705 + + 9 + 1 1.383 44801.5 1.0 6801 5409 12202 HBL1_DMSO_200M_050219_1,12212 HBL1_DMSO_200M_050219_1,12212,PIKPCISV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12213 62.75 38.0 2654700.0 25 0 250750.0 + 33203 SFIQGTTTM 9 114 493.23684401443967 984.4591350956794 2 493.2369262576103 MULTI CID FTMS 0 0 0 12202 670486.3125 0.0771422823237363 -3 0.311981201171875 11 Unmodified _SFIQGTTTM_ ENSG00000165501|ENST00000298288|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF 20.453626601364224 0.2830276176381075 3 [PS]GTMQ{I|L} 7 6 34.26 0.0 0.0 3.48 0.0 0.0 0.0 267.10211540257313 267.10211540257313 2.0669128824561653 0.0 0.0 0.0 0 0.0 1.0 0.937273075074786 0.5 [PS]GTMQ{I|L} 3.48 - 542 1 1.383 80679.3 1.0 6802 5409 12202 HBL1_DMSO_200M_050219_1,12213 HBL1_DMSO_200M_050219_1,12213,SFIQGTTTM False True SFIQGTTTM 62.750328 493.23692625761 23496850.0 12202.0 ENST00000540712.1_1_14:50068361-50081211:+|nuORF;;ENSG00000165501|ENST00000298288|LRR1 4.3616078694661455 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12214 62.752 97.0 1206100.0 25 0 96264.0 + 22634 LPYPIHQV 8 119 483.7743679929477 965.5341830526952 2 483.7745544314384 MULTI CID FTMS 0 0 0 12202 663515.5625 0.2060158196877575 4 -0.2552490234375 12 Unmodified _LPYPIHQV_ ENSG00000176444|ENST00000368361|CLK2;ENST00000416636.2_1_7:23624683-23625604:-|nuORF;ENST00000497188.1_1_1:155234069-155238352:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2 86.12129899796855 0.0650563179454676 3 {I|L}PYP{I|L}HN{I|L} 8 2 + 70.373 0.0 0.0 7.2885 7.2885 81.82 0.0 0.0 0.0 31.63856802638669 1.346985738974567 1.346985738974567 1.346985738974567 0 1.2658715643802767 1.5228787452803376 0.0 0.9436726795685344 {I|L}PYP{I|L}HN{I|L};{I|L}PYP{I|L}HQV;{I|L}PYP{I|L}HGG{I|L};{I|L}PYP{I|L}H[AG]V;{I|L}P{[RE]|[WV]}PQN{I|L};{I|L}P{[RE]|[WV]}PQQV;{I|L}P{[RE]|[WV]}P[AG]N{I|L};{I|L}P{[RE]|[WV]}P[AG]QV;{I|L}P{[RE]|[WV]}PQGG{I|L};{I|L}P{[RE]|[WV]}PQ[AG]V 7.2885;7.149;5.3518;5.2123;4.58;4.4405;3.6207;3.4812;3.3217;3.1822 -;+;-;-;-;-;-;-;-;- + 964 + 1 1.383 93084.4 1.0 6803 5409 12202 HBL1_DMSO_200M_050219_1,12214 HBL1_DMSO_200M_050219_1,12214,LPYPIHQV True True LPYPIHQV 62.752436 483.774554431438 110124684.0 12202.0 ENSG00000176444|ENST00000368361|CLK2;;ENST00000497188.1_1_1:155234069-155238352:-|nuORF;;ENST00000416636.2_1_7:23624683-23625604:-|nuORF;;nc|ENSG00000176444|P49760-3|CLK2 7.574570496877034 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12215 62.754 67.0 703040.0 25 0 44809.0 + 16426 IYYFRCRD 8 79 568.2717575992476 1134.5289622652951 2 568.2716552615166 MULTI CID FTMS 0 0 0 12202 553538.4375 1.0 0 0.0 13 Unmodified _IYYFRCRD_ ENSG00000108384|ENST00000337432|RAD51C;ENST00000475762.5_1_17:56772326-56801433:+|nuORF;ENST00000487525.5_1_17:56772519-56783250:+|nuORF;ENST00000487921.5_1_17:56769962-56783250:+|nuORF 5.230669730166228 0.792582437072536 3 YY{I|L}Q 4 6 28.416 0.0 0.0 2.5047 0.0 0.0 0.0 564.2265719049436 564.2265719049436 16.53212513775344 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 YY{I|L}Q 2.5047 - 91 + 1 1.383 41263.2 1.0 6804 5409 12202 HBL1_DMSO_200M_050219_1,12215 HBL1_DMSO_200M_050219_1,12215,IYYFRCRD False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12216 62.757 161.0 815830.0 25 0 85639.0 + 41616 VPPPLAKAI 9 115 453.29442015475456 904.5742873763091 2 453.2944213747978 MULTI CID FTMS 0 0 0 12202 526320.8125 0.1917992089643179 -8 0.7672538757324219 14 Unmodified _VPPPLAKAI_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;ENST00000588913.5_1_19:10244345-10246231:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 48.345845343767074 0.0439967357579942 3 VPPP{I|L}AKA{I|L} 9 0 + 63.788 0.0 0.0 7.0517 7.0517 62.221 0.0 0.0 0.0 37.32493038479682 7.870244533478619 7.870244533478619 0.0 0 0.6989700043360187 2.0 0.0 0.0 + + VPPP{I|L}AKA{I|L};VPPP{I|L}AAK{I|L};VPPPA{I|L}AK{I|L};VPPPA{I|L}KA{I|L};VPPPAA{I|L}K{I|L};VP{I|L}{[HG]|PP}AKA{I|L};VP{I|L}{[HG]|PP}AAK{I|L};V[YK]{I|L}AKA{I|L};V[YK]{I|L}AAK{I|L};V[YK]A{I|L}AK{I|L} 7.0517;7.0517;6.9876;6.9876;6.6548;5.0085;5.0085;1.6118;1.6118;1.5477 +;-;-;-;-;-;-;-;-;- + 593 + 1 1.383 109170.7 1.0 6805 5409 12202 HBL1_DMSO_200M_050219_1,12216 HBL1_DMSO_200M_050219_1,12216,VPPPLAKAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12217 62.758 45.0 968260.0 25 0 126220.0 + 11185 GELVNLLTI 9 86 486.290750407654 970.566947882108 2 486.2928039431572 MULTI CID FTMS 0 0 0 12202 532056.1875 0.4786795844024514 -2 0.1885108947753906 15 Unmodified _GELVNLLTI_ nc|ENSG00000183833|Q7Z4T9-2|CFAP91 29.081581746732265 0.1611639662936252 3 [VS]{I|L} 3 7 24.437 0.0 0.0 2.5178 0.0 0.0 0.0 668.3582131011111 668.3582131011111 2.3754373814287497 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]{I|L} 2.5178 - 107 1 1.383 38782.6 1.0 6806 5409 12202 HBL1_DMSO_200M_050219_1,12217 HBL1_DMSO_200M_050219_1,12217,GELVNLLTI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12218 62.76 53.0 1503100.0 25 0 159530.0 + 23373 LTDPAIVKV 9 123 478.2954567715549 954.5763606099098 2 478.2966186404228 MULTI CID FTMS 0 0 0 12202 478184.96875 0.2379673450218187 -2 0.1885108947753906 16 Unmodified _LTDPAIVKV_ ENSG00000171824|ENST00000376936|EXOSC10;nc|ENSG00000171824|Q01780-2|EXOSC10 56.17704186161178 0.0281986971544335 3 [{I|L}T]DPA{I|L}VKV 9 0 + 57.687 0.0 0.0 6.0432 6.0432 90.682 0.0 0.0 0.0 24.840536406824555 12.887955392469692 12.887955392469692 19.46462401513724 0 1.055462187404089 2.0 0.0 0.0 + + [{I|L}T]DPA{I|L}VKV;[{I|L}T]DPAVVK{I|L} 6.0432;4.0041 +;- + 569 + 1 1.383 67224.0 1.0 6807 5409 12202 HBL1_DMSO_200M_050219_1,12218 HBL1_DMSO_200M_050219_1,12218,LTDPAIVKV True True LTDPAIVKV 62.759811 478.296618640423 11113193.0 12202.0 ENSG00000171824|ENST00000376936|EXOSC10;;nc|ENSG00000171824|Q01780-2|EXOSC10 6.370227018992106 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12219 62.763 157.0 592890.0 25 0 102500.0 -1 0 123 466.2658827676893 465.2586063010893 1 466.2656432986259 MULTI CID FTMS 0 0 0 12202 390928.21875 0.0232332045238541 8 -0.5273628234863281 17 3 R 1 -1 16.017 0.0 0.0 3.4426 0.0 0.0 291.1462996378065 0.0 291.1462996378065 0.0 1.7951097132083405 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 R 3.4426 - 38 + 1 1.383 74591.6 1.0 6808 5409 12202 HBL1_DMSO_200M_050219_1,12219 HBL1_DMSO_200M_050219_1,12219, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12220 62.767 210.0 886700.0 25 0 73591.0 -1 0 163 340.2093413180756 678.4041297029512 2 340.2093078494072 MULTI CID FTMS 0 0 0 12202 379471.34375 0.0214179314501062 12 -0.8550987243652344 18 3 {I|L} 1 -1 8.2879 0.0 0.0 1.2217 0.0 0.0 547.3089434009966 0.0 547.3089434009966 0.0 0.2248357275826151 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2217 - 24 + 1 1.383 149008.2 1.0 6809 5409 12202 HBL1_DMSO_200M_050219_1,12220 HBL1_DMSO_200M_050219_1,12220, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12221 62.775 455.0 247020.0 25 0 7960.9 -1 YNKNMSEVPNS 11 162 649.7897966535606 1297.5650403739212 2 649.7908203005791 MULTI CID FTMS 0 0 0 12202 363516.65625 1.0 0 0.0 19 Oxidation (M) _YNKNM(Oxidation (M))SEVPNS_ ENST00000341039.6_1_12:121017324-121018937:-|nuORF;ENST00000542776.5_1_12:121017321-121017686:-|nuORF 15.248480904072842 0.7179608125786238 3 [C(Carbamidomethyl (C))R]V[EC]C[KA]CQV 11 -1 + 29.591 0.0 0.0 2.2805 2.2805 69.268 0.0 0.0 0.0 11.63264971512357 3.999225873928175 3.999225873928175 2.0468356771014484 0 0.0 0.0 0.5796896906561032 1.4876954943324543 [C(Carbamidomethyl (C))R]V[EC]C[KA]CQV;[C(Carbamidomethyl (C))R]VC(Carbamidomethyl (C))[KC][MD]QV;[C(Carbamidomethyl (C))R]V[EC]C[KA]CN{I|L};[C(Carbamidomethyl (C))R]VC(Carbamidomethyl (C))[KC][MD]N{I|L};{[DA]|[EG]}YAA[WC(Carbamidomethyl (C))]Q[WK];{[DA]|[EG]}YAA{[MS]|[{M(Oxidation (M))|F}A]}QQ[WK];{[DA]|[EG]}YAA[KC]DQ[WK];[C(Carbamidomethyl (C))R]VC(Carbamidomethyl (C))[KC]AA{M(Oxidation (M))|F}SP;{[DA]|[EG]}Y{[TV]|[{I|L}S]}C(Carbamidomethyl (C))QQ[WK];[C(Carbamidomethyl (C))R]V[EC]CVV{M(Oxidation (M))|F}SP 2.2805;2.1228;1.6292;1.4715;1.2147;1.0701;0.98603;0.98214;0.84836;0.60733 -;-;-;-;-;-;-;-;-;- 722 + 1 1.383 87256.5 1.0 6810 5409 12202 HBL1_DMSO_200M_050219_1,12221 HBL1_DMSO_200M_050219_1,12221,YNKNMSEVPNS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12222 62.784 490.0 595890.0 25 0 34863.0 -1 LSCDSSMDV 9 260 515.1977806846998 1028.3810084361994 2 515.7003051638603 MULTI CID FTMS 0 0 0 12202 354403.65625 1.0 0 0.0 20 Carbamidomethyl (C),Oxidation (M) _LSC(Carbamidomethyl (C))DSSM(Oxidation (M))DV_ ENSG00000145934|ENST00000518659|TENM2;nc|ENSG00000145934|Q9NT68-2|TENM2 8.593279151180031 0.6146971463335029 3 SS 2 -1 16.766 0.0 0.0 1.6303 0.0 0.0 116.0737915707436 735.2191111696076 851.2929027403512 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 SS 1.6303 + + 2023 + 1 1.383 217384.8 1.0 6811 5409 12202 HBL1_DMSO_200M_050219_1,12222 HBL1_DMSO_200M_050219_1,12222,LSCDSSMDV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12224 62.79 253.0 379950.0 25 0 28491.0 + 24743 MPFDPSKV 8 124 460.7306051205 919.4466573078 2 460.7307006716728 MULTI CID FTMS 0 0 0 12223 136002.265625 0.1270136968214885 4 -0.2490272521972656 1 Unmodified _MPFDPSKV_ ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB 39.94969957227396 0.2351327405675156 3 MP{M(Oxidation (M))|F}DPSKV 8 0 + 75.22 0.0 0.0 8.181 8.181 92.139 0.0 0.0 0.0 55.1857272430842 12.5190243216651 12.5190243216651 8.504930719009636 0 0.9916440611282624 1.5228787452803376 0.0 0.0 + + MP{M(Oxidation (M))|F}DPSKV;MP{M(Oxidation (M))|F}DVVGGV;MP{M(Oxidation (M))|F}DVVNV;MP{M(Oxidation (M))|F}DV[KP]S;MP{M(Oxidation (M))|F}DV[QA]{I|L};MPTAP[{M(Oxidation (M))|F}T]GV;MP[EC][{I|L}T]KV;MP[EC]{[TV]|[{I|L}S]}K{I|L};MVET{[RE]|[WV]}GV;MV[WK]EEV 8.181;7.2559;7.0703;6.5308;6.3331;4.5224;4.4262;2.9807;1.9313;1.8689 +;-;-;-;-;-;-;-;-;- + 483 + 1 1.383 80310.8 1.0 6812 5410 12223 HBL1_DMSO_200M_050219_1,12224 HBL1_DMSO_200M_050219_1,12224,MPFDPSKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12225 62.792 87.0 1102500.0 25 0 114370.0 41683 VPRPCSLL 8 128 442.755915619272 883.4972783053439 2 442.7567321658134 MULTI CID FTMS 0 0 0 12223 649396.25 0.3567976729448869 -5 0.4089927673339844 2 Unmodified _VPRPCSLL_ ENSG00000137642|ENST00000260197|SORL1 10.183394434864962 0.7604730176254005 3 {I|L} 1 7 11.594 0.0 0.0 1.3123 0.0 0.0 752.4021988149127 0.0 752.4021988149127 0.0 4.6040937697618745 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3123 + + 88 + 1 1.383 76317.3 1.0 6813 5410 12223 HBL1_DMSO_200M_050219_1,12225 HBL1_DMSO_200M_050219_1,12225,VPRPCSLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12226 62.794 65.0 1319700.0 25 0 189540.0 + + 16336 IYLPGRPTSM 10 75 567.8024087044631 1133.590264475726 2 567.8030883669853 MULTI CID FTMS 0 0 0 12223 593399.3125 0.7387622325734265 -1 0.0498924255371093 3 Unmodified _IYIPYFRY_ ENSG00000102858|ENST00000262370|MGRN1;nc|ENSG00000102858|O60291-3|MGRN1 18.13498045792455 0.6430038125133779 3 {I|L}Y{I|L}P 4 -1 56.186 0.0 0.0 4.9564 0.0 0.0 0.0 644.2848573496759 644.2848573496759 39.98773768811724 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}Y{I|L}P 4.9564 + + 48 + 1 1.383 67595.7 1.0 6814 5410 12223 HBL1_DMSO_200M_050219_1,12226 HBL1_DMSO_200M_050219_1,12226,IYIPYFRY False False IYLPGRPTSM 62.793757 567.803088366985 4923116.5 12223.0 ENSG00000102858|ENST00000262370|MGRN1;;nc|ENSG00000102858|O60291-3|MGRN1 -0.009725942586859 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12227 62.796 120.0 834530.0 25 0 69195.0 + 42007 VQQKLSSEE 9 127 349.84909630276115 1046.5254595084834 3 349.8493530154228 MULTI CID FTMS 0 0 0 12223 532757.0 0.1765213312995957 -4 0.3618736267089844 4 Unmodified _VQQKLSSEE_ REV__ENSG00000060237|ENST00000315939|WNK1;REV__nc|ENSG00000060237|Q9H4A3-2|WNK1;REV__nc|ENSG00000060237|Q9H4A3-4|WNK1;REV__nc|ENSG00000060237|Q9H4A3-5|WNK1;REV__nc|ENSG00000060237|Q9H4A3-6|WNK1;REV__nc|ENSG00000060237|Q9H4A3-7|WNK1 11.640296217721598 0.521594087909532 3 {I|L}P{[MG]|[TS]}{M(Oxidation (M))|F} 5 -1 14.253 0.0 0.0 1.3619 0.0 0.0 483.2794400766459 0.0 483.2794400766459 0.0 0.757659435244733 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {I|L}P{[MG]|[TS]}{M(Oxidation (M))|F} 1.3619 - 221 + 1 1.383 89936.1 1.0 6815 5410 12223 HBL1_DMSO_200M_050219_1,12227 HBL1_DMSO_200M_050219_1,12227,VQQKLSSEE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12228 62.804 429.0 526160.0 25 0 127420.0 + 31072 RLLDEEISRV 10 128 615.3459800010178 1228.6774070688357 2 615.3453246951103 MULTI CID FTMS 0 0 0 12223 360633.46875 0.3425679752891395 -4 0.3618736267089844 5 Unmodified _RLLDEEISRV_ ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI 28.46034017890801 0.329245093204378 3 VG{I|L}{I|L}DEE[YK]P 10 6 77.349 0.0 0.0 6.2953 0.0 0.0 0.0 82.0670412652953 82.0670412652953 65.56662321108453 0.0 0.0 0.0 0 2.004432191740108 1.6989700043360187 0.3494850021680094 0.4247425010840047 VG{I|L}{I|L}DEE[YK]P 6.2953 - 1472 + 1 1.383 165074.7 1.0 6816 5410 12223 HBL1_DMSO_200M_050219_1,12228 HBL1_DMSO_200M_050219_1,12228,RLLDEEISRV False True RLLDEEISRV 62.8039 615.34532469511 11534060.0 12223.0 nc|ENSG00000112531|Q96PU8-6|QKI;;nc|ENSG00000112531|Q96PU8-8|QKI;;nc|ENSG00000112531|Q96PU8-9|QKI;;ENSG00000112531|ENST00000361752|QKI;;nc|ENSG00000112531|Q96PU8-3|QKI;;nc|ENSG00000112531|Q96PU8-5|QKI 7.103357632954915 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12229 62.812 431.0 686960.0 25 0 65132.0 -1 0 162 562.3257644124377 561.3184879458377 1 562.3276855349541 MULTI CID FTMS 0 0 0 12223 345066.34375 0.6475558878723904 -1 0.0498924255371093 6 3 {I|L}{I|L}SMV 5 -1 + 53.544 0.0 0.0 9.539 9.539 96.499 0.0 0.0 0.0 3.832946754800375 3.832946754800375 3.832946754800375 12.635915918212604 0 1.1237125054200234 1.6989700043360187 0.6109243748081782 0.0 {I|L}{I|L}SMV;{I|L}{I|L}TC{I|L};{[TV]|[{I|L}S]}{I|L}MV;{I|L}{I|L}V{[MS]|[{M(Oxidation (M))|F}A]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}V{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}V{I|L}{I|L};{[TV]|[{I|L}S]}MV{I|L};{[TV]|[{I|L}S]}M{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PV{I|L} 9.539;7.2879;7.0151;6.6949;6.2904;6.1438;6.0472;4.3687;4.2221;2.5823 -;-;-;-;-;-;-;-;-;- 273 + 1 1.383 221533.0 1.0 6817 5410 12223 HBL1_DMSO_200M_050219_1,12229 HBL1_DMSO_200M_050219_1,12229, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12230 62.814 130.0 723030.0 25 0 113100.0 + 9236 FGSSVLVV 8 123 404.2330665069529 806.4515800807059 2 404.2331115603447 MULTI CID FTMS 0 0 0 12223 336532.1875 0.6558219150969674 -2 0.1491127014160156 7 Unmodified _FGSSVLVV_ REV__ENSG00000068024|ENST00000543185|HDAC4;REV__ENST00000494800.1_1_2:239977015-240002822:-|nuORF;REV__nc|ENSG00000068024|P56524-2|HDAC4;REV__nc|ENSG00000068024|P56524|HDAC4 8.593279151180031 0.7721714526254883 3 GAW{I|L}SW 6 -1 20.068 0.0 0.0 2.4884 0.0 0.0 88.09049783965584 0.0 88.09049783965584 0.0 8.078377454521082 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 GAW{I|L}SW 2.4884 - 313 + 1 1.383 76407.7 1.0 6818 5410 12223 HBL1_DMSO_200M_050219_1,12230 HBL1_DMSO_200M_050219_1,12230,FGSSVLVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12231 62.823 497.0 655180.0 25 0 60769.0 + 15891 ISSEPQCEM 9 194 512.2102468860109 1022.4059408388216 2 512.2107421755791 MULTI CID FTMS 0 0 0 12223 284900.625 0.6755805238672039 -4 0.3618736267089844 8 Unmodified _ISSEPQCEM_ REV__ENSG00000181090|ENST00000460843|EHMT1;REV__ENST00000371394.6_1_9:140611085-140686569:+|nuORF;REV__nc|ENSG00000181090|Q9H9B1-3|EHMT1;REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1 14.838274106304384 0.4350285940865338 3 {I|L}{I|L}N[MN]TV 7 -1 30.823 0.0 0.0 3.0148 0.0 0.0 218.9745835969432 0.0 218.9745835969432 0.0 -0.2909751103720559 -0.2909751103720559 0.0 0 0.0 0.0 1.305462187404089 0.0 {I|L}{I|L}N[MN]TV 3.0148 - 2783 + 1 1.383 245471.0 1.0 6819 5410 12223 HBL1_DMSO_200M_050219_1,12231 HBL1_DMSO_200M_050219_1,12231,ISSEPQCEM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12232 62.827 204.0 230420.0 25 0 35603.0 + 20479 LLLDKETV 8 81 465.7792123171493 0 465.7784911990166 PEAK CID FTMS 0 0 0 12223 274512.375 0.2732773152535438 -1 0.0498924255371093 9 Unmodified _LLLDKETV_ REV__ENSG00000168807|ENST00000336278|SNTB2 5.760428011301431 0.5786759180849727 3 G{I|L} 2 -1 10.969 0.0 0.0 1.1801 0.0 0.0 407.2663581286361 349.15143762760005 756.4177957562362 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L} 1.1801 - 19 + 1 1.383 41799.4 1.0 6820 5410 12223 HBL1_DMSO_200M_050219_1,12232 HBL1_DMSO_200M_050219_1,12232,LLLDKETV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12233 62.831 218.0 544430.0 25 0 69542.0 + 32132 RVPELLHRL 9 107 378.2367225246877 1131.688338174263 3 378.2371703982353 MULTI CID FTMS 0 0 0 12223 253846.1875 0.3247903716792872 -4 0.3618736267089844 10 Unmodified _RVPELLHRL_ ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;nc|ENSG00000068878|Q14997-3|PSME4 18.721224879955976 0.3299216912490967 3 {I|L}{I|L}GHR{I|L} 6 5 39.429 0.0 0.0 3.4841 0.0 0.0 424.2537811447692 0.0 424.2537811447692 0.0 27.42275032520141 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}{I|L}GHR{I|L} 3.4841 - 120 + 1 1.383 98152.9 1.0 6821 5410 12223 HBL1_DMSO_200M_050219_1,12233 HBL1_DMSO_200M_050219_1,12233,RVPELLHRL False True RVPELLHRL 62.831 378.237170398235 11304887.0 12223.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4;;nc|ENSG00000068878|Q14997-3|PSME4 3.9162755012512207 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12234 62.84 515.0 380390.0 25 0 22940.0 + 44740 YPKRPDWNI 9 163 594.8126745154876 1187.6107960977752 2 594.8157836794853 MULTI CID FTMS 0 0 0 12223 188937.25 0.2432882376299074 -1 0.0498924255371093 11 Unmodified _YPKRPDWNI_ ENSG00000180376|ENST00000394672|CCDC66;ENST00000476142.1_1_3:56651192-56651654:+|nuORF;nc|ENSG00000180376|A2RUB6-3|CCDC66 97.74103586103692 0.0118322510706281 3 YPKRDPWN{I|L} 9 2 + 91.723 0.0 0.0 7.7234 7.7234 92.635 0.0 0.0 0.0 31.96272488392665 9.34498451243566 9.34498451243566 9.208187539523747 0 2.0114393726401687 1.6989700043360187 0.0 1.6025684359364407 YPKRDPWN{I|L};YPK[VG]DPWN{I|L};YPKRDPWQV;YPKRDPWGG{I|L};YPK[VG]DPWQV;YPKRDPW[AG]V;YPK[VG]DPWGG{I|L};YPK[VG]DPW[AG]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KRDPWN{I|L};YPKR{[DA]|[EG]}[RD][PA] 7.7234;6.948;6.9365;6.4336;6.1611;5.6467;5.4047;4.6178;4.0856;3.4149 -;-;-;-;-;-;-;-;-;- 3459 + 1 1.383 147286.5 1.0 6822 5410 12223 HBL1_DMSO_200M_050219_1,12234 HBL1_DMSO_200M_050219_1,12234,YPKRPDWNI True True YPKRPDWNI 62.840079 594.815783679485 4481058.5 12223.0 nc|ENSG00000180376|A2RUB6-3|CCDC66;;ENST00000476142.1_1_3:56651192-56651654:+|nuORF;;ENSG00000180376|ENST00000394672|CCDC66 7.913155237833659 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12235 62.851 531.0 196560.0 25 0 6907.3 + -1 LLLLQMMQWAM 11 116 697.353213372844 1392.691873812488 2 697.3539306521416 MULTI CID FTMS 0 0 0 12223 198185.5625 0.9804975401129375 1 -0.0952606201171875 12 Oxidation (M) _LLLLQM(Oxidation (M))MQWAM_ REV__ENSG00000110203|ENST00000611028|FOLR3;REV__nc|ENSG00000110203|P41439-4|FOLR3 3.2813086475875832 0.8596665074481906 3 Q 1 -1 11.783 0.0 0.0 0.84604 0.0 0.0 1246.6224138288926 0.0 1246.6224138288926 0.0 1.694092782766905 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.84604 + + 94 + 1 1.383 77483.2 1.0 6823 5410 12223 HBL1_DMSO_200M_050219_1,12235 HBL1_DMSO_200M_050219_1,12235,LLLLQMMQWAM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12236 62.86 547.0 124720.0 25 0 4889.9 + -1 LADHQLQKCTN 11 119 664.3235948983728 1326.6326368635457 2 664.7698242068291 MULTI CID FTMS 0 0 0 -1 0 13 Carbamidomethyl (C) _LADHQLQKC(Carbamidomethyl (C))TN_ REV__ENST00000468090.5_1_21:45178781-45178892:+|nuORF 5.731851221503515 0.8481046878870278 3 [TP]T 3 -1 16.019 0.0 0.0 1.2075 0.0 0.0 0.0 1024.460858869658 1024.460858869658 1.7940858209386334 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.484825539911597 0.0 [TP]T 1.2075 - 543 1 1.383 58624.8 1.0 6824 5410 12223 HBL1_DMSO_200M_050219_1,12236 HBL1_DMSO_200M_050219_1,12236,LADHQLQKCTN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12237 62.87 534.0 175170.0 25 0 11107.0 + -1 EGYYGYTGAFR 11 127 641.959614046902 1922.8570127409057 3 641.9609252810478 MULTI CID FTMS 0 0 0 12223 157970.15625 1.0 0 0.0 14 ENST00000462495.1_1_3:133486931-133489451:+|nuORF;nc|ENSG00000091513|P02787|TF;ENSG00000091513|ENST00000402696|TF 3 {[DA]|[EG]}V{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EYN 9 -1 44.277 0.0 0.0 2.3027 0.0 0.0 0.0 872.3648001767057 872.3648001767057 23.598690714973948 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.1590970050269638 0.0 {[DA]|[EG]}V{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EYN 2.3027 - 1688 1 1.383 76415.3 1.0 6825 5410 12223 HBL1_DMSO_200M_050219_1,12237 HBL1_DMSO_200M_050219_1,12237, False False EGYYGYTGAFR 62.869617 641.960925281048 850884.0625 12223.0 ENST00000462495.1_1_3:133486931-133489451:+|nuORF;;nc|ENSG00000091513|P02787|TF;;ENSG00000091513|ENST00000402696|TF 5.696433544158936 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12238 62.879 530.0 371860.0 25 0 13403.0 + -1 IFCGNLNTTL 10 184 576.7904744694557 0 576.7918578982353 PEAK CID FTMS 0 0 0 12223 139848.234375 0.4328332939201688 -2 0.1491127014160156 15 Carbamidomethyl (C) _IFC(Carbamidomethyl (C))GNLNTTL_ REV__ENST00000513036.5_1_4:24531269-24531320:-|nuORF 32.78568957990786 0.1876390401607402 3 TTMSPKD 7 -1 29.54 0.0 0.0 2.5652 0.0 0.0 131.09631651528008 257.0942476861938 388.1905642014739 0.0 0.0 0.0 0.0 0 1.1382104921644451 0.0 1.579689690656103 0.0 TTMSPKD 2.5652 - 2780 + 1 1.383 153210.3 1.0 6826 5410 12223 HBL1_DMSO_200M_050219_1,12238 HBL1_DMSO_200M_050219_1,12238,IFCGNLNTTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12240 62.883 1.5 32406000.0 25 0 3244800.0 + 3761 DAHIYLNHI 9 75 365.8579892021616 1094.5521382066847 3 365.8582031130791 MULTI CID FTMS 0 0 0 12239 37383844.0 1.0 0 0.0 1 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 41.95555342248728 0.0647214845423414 3 [HA]D{I|L}Y{I|L}N[H{I|L}] 9 2 [HA]D + + 49.213 9.1812 2.8414 4.4962 4.4962 53.996 0.0 0.0 0.0 0.0 34.463950151760656 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.7302046884880937 [HA]D{I|L}Y{I|L}N[H{I|L}] 4.4962 - 234 + 1 1.371 44437.6 1.0 6827 5411 12239 HBL1_DMSO_200M_050219_1,12240 HBL1_DMSO_200M_050219_1,12240,DAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12241 62.884 3.3 16601000.0 25 0 1533100.0 + 22343 LPSPLKQTI 9 79 498.8078646768776 995.6011764205552 2 498.8084289431572 MULTI CID FTMS 0 0 0 12239 20574214.0 0.042740710251395 -12 1.1665763854980469 2 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 61.60191391372663 0.0251951588191061 3 {I|L}PSP{I|L}KQT{I|L} 9 0 + 87.706 0.0 0.0 8.8093 8.8093 94.263 0.0 0.0 0.0 58.93375772157654 13.46787486224656 13.46787486224656 9.208187539523747 0 1.2302046884880935 1.6989700043360187 0.3807196863200844 0.3494850021680094 + + {I|L}PSP{I|L}KQT{I|L};{I|L}PSP{I|L}K[AG]T{I|L} 8.8093;7.8844 +;- + 441 + 1 1.371 45761.7 1.0 6828 5411 12239 HBL1_DMSO_200M_050219_1,12241 HBL1_DMSO_200M_050219_1,12241,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12242 62.885 11.0 3411000.0 25 0 478870.0 + 4539 DAYPNGLQV 9 60 488.740557401362 975.466561869524 2 488.7411682009697 MULTI CID FTMS 0 0 0 12239 6484322.5 1.0 0 0.0 3 Unmodified _DAYPNGLQV_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 20.453626601364224 0.2830276176381075 3 [NP]G{I|L}Q 5 4 20.942 0.0 0.0 2.1469 0.0 0.0 0.0 463.181350037746 463.181350037746 2.882418650521359 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + [NP]G{I|L}Q 2.1469 + + 85 1 1.371 35445.8 1.0 6829 5411 12239 HBL1_DMSO_200M_050219_1,12242 HBL1_DMSO_200M_050219_1,12242,DAYPNGLQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12243 62.887 10.0 4325800.0 25 0 637090.0 + 39889 VFMHVSTAY 9 73 527.7546397335034 1053.494726533807 2 527.7557861208916 MULTI CID FTMS 0 0 0 12239 4592549.0 0.4744289893525531 -2 0.1451530456542968 4 Unmodified _VFMHVSTAY_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 34.18733598223924 0.1073653526364521 3 AT[PA]VYAY 8 6 42.626 0.0 0.0 4.0461 0.0 0.0 199.0803112017026 0.0 199.0803112017026 0.0 32.71095458289915 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 AT[PA]VYAY 4.0461 - 198 + 1 1.371 39488.7 1.0 6830 5411 12239 HBL1_DMSO_200M_050219_1,12243 HBL1_DMSO_200M_050219_1,12243,VFMHVSTAY True True VFMHVSTAY 62.886587 527.755786120892 124958448.0 12239.0 ENST00000524933.1_1_11:13716477-13732426:+|nuORF;;ENSG00000197601|ENST00000354817|FAR1 7.982642650604248 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12244 62.888 11.0 3729100.0 25 0 272840.0 + 24888 MPNPSLAQV 9 81 478.7470766031733 955.4796002731466 2 478.7476989626884 MULTI CID FTMS 0 0 0 12239 4196895.0 0.5451587728593766 -5 0.4571342468261719 5 Unmodified _MPNPSLAQV_ ENSG00000152240|ENST00000282058|HAUS1;nc|ENSG00000152240|Q96CS2-2|HAUS1 26.268140514670165 0.1969607489560049 3 VC(Carbamidomethyl (C))[PS]{I|L}AQV 8 3 28.635 0.0 0.0 2.9969 0.0 0.0 83.03803450752109 0.0 83.03803450752109 0.0 14.03054501936036 0.0 0.0 0 0.4957416651753049 0.0 0.7302046884880937 0.0 VC(Carbamidomethyl (C))[PS]{I|L}AQV 2.9969 - 253 1 1.371 39101.3 1.0 6831 5411 12239 HBL1_DMSO_200M_050219_1,12244 HBL1_DMSO_200M_050219_1,12244,MPNPSLAQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12245 62.889 14.0 3665000.0 25 0 500020.0 -1 QAVGMWQVL 9 69 524.2697408971652 1046.5249288611303 2 524.2706786990166 MULTI CID FTMS 0 0 0 12239 4134287.0 0.8931943166625024 -3 0.2443733215332031 6 Oxidation (M) _QAVGM(Oxidation (M))WQVL_ ENSG00000091428|ENST00000397081|RAPGEF4;nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;nc|ENSG00000091428|Q8WZA2-5|RAPGEF4 15.847184025352805 0.4077185912009129 3 [QA]V[KG]{I|L}P{[MG]|[TS]}{M(Oxidation (M))|F} 10 -1 + 43.426 0.0 0.0 4.1496 4.1496 85.665 0.0 0.0 0.0 28.82210129226658 5.1849178312658495 5.1849178312658495 43.426195062028455 0 1.305462187404089 0.7695510786217261 0.0 0.0 [QA]V[KG]{I|L}P{[MG]|[TS]}{M(Oxidation (M))|F} 4.1496 - 80 + 1 1.371 44868.0 1.0 6832 5411 12239 HBL1_DMSO_200M_050219_1,12245 HBL1_DMSO_200M_050219_1,12245,QAVGMWQVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12246 62.89 25.0 1771800.0 25 0 360660.0 44098 YIYMNFFFF 9 68 431.1983176616149 1290.5731235850446 3 431.1988098025322 MULTI CID FTMS 0 0 0 12239 1984628.625 0.5393156922814374 2 -0.1100959777832031 7 Unmodified _YIYMNFFFF_ nc|ENSG00000082175|P06401-4|PGR 8.593279151180031 0.6146971463335029 3 {NN|[MP]|[D{I|L}]|[EV]}R{I|L} 4 8 16.33 0.0 0.0 1.2654 0.0 0.0 0.0 790.2526639505321 790.2526639505321 3.5661911959347137 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}R{I|L} 1.2654 - 20 1 1.371 42388.3 1.0 6833 5411 12239 HBL1_DMSO_200M_050219_1,12246 HBL1_DMSO_200M_050219_1,12246,YIYMNFFFF False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12247 62.891 27.0 1471700.0 25 0 163760.0 + 43064 VYIEHRLMM 9 66 397.8716946178959 1190.5932544538875 3 397.8719055056572 MULTI CID FTMS 0 0 0 12239 1938051.25 0.4202973188754589 -2 0.1451530456542968 8 Unmodified _VYIEHRLMM_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-2|MCM7 17.11289562659939 0.3734572693229295 3 VY{I|L}EH 5 4 51.682 0.0 0.0 4.3409 0.0 0.0 0.0 546.2548922174436 546.2548922174436 38.18758762624413 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + VY{I|L}EH 4.3409 + + 63 + 1 1.371 40082.1 1.0 6834 5411 12239 HBL1_DMSO_200M_050219_1,12247 HBL1_DMSO_200M_050219_1,12247,VYIEHRLMM False True VYIEHRLMM 62.891302 397.871905505657 86281956.0 12239.0 nc|ENSG00000166508|P33993-2|MCM7;;ENSG00000166508|ENST00000303887|MCM7 5.804668426513672 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12248 62.892 34.0 1080400.0 25 0 155700.0 -1 YYLDMHSLPH 10 36 646.293741440793 1290.572929948386 2 646.2945434451103 MULTI CID FTMS 0 0 0 12239 1822838.375 0.8120268928129694 2 -0.1100959777832031 9 Oxidation (M) _YYLDM(Oxidation (M))HSLPH_ ENSG00000087111|ENST00000308360|PIGS;ENST00000484580.6_1_17:26883511-26887327:-|nuORF;nc|ENSG00000087111|Q96S52-2|PIGS 13.90604991867851 0.6142120002215601 3 YY{I|L}D 4 -1 56.186 0.0 0.0 4.3535 0.0 0.0 0.0 733.3134679631822 733.3134679631822 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YY{I|L}D 4.3535 + + 12 + 1 1.371 33303.6 1.0 6835 5411 12239 HBL1_DMSO_200M_050219_1,12248 HBL1_DMSO_200M_050219_1,12248,YYLDMHSLPH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12249 62.894 92.0 1329300.0 25 0 107150.0 38098 TPLAFSVKPTL 11 133 391.8990760832078 1172.6753988498233 3 392.2344848513603 MULTI CID FTMS 0 0 0 12239 1706673.0 1.0 0 0.0 10 Unmodified _TPLAFSVKPTL_ ENST00000557439.5_1_14:104172000-104172285:-|nuORF 17.04857598603903 0.6805168445818576 3 [TA]P{I|L}P{I|L} 6 7 35.754 0.0 0.0 3.0489 0.0 0.0 0.0 577.2917563099039 577.2917563099039 9.556204968171812 0.0 0.0 0.0 0 0.0 2.0 1.113982988912431 0.0 [TA]P{I|L}P{I|L} 3.0489 - 300 1 1.371 99334.8 1.0 6836 5411 12239 HBL1_DMSO_200M_050219_1,12249 HBL1_DMSO_200M_050219_1,12249,TPLAFSVKPTL False True TAPLAPTI 62.894493 392.23448485136 3884198.25 12239.0 ENSG00000124575|ENST00000244534|H1-3 4.948565165201823 2.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12250 62.896 23.0 1920200.0 25 0 153290.0 41684 VPRQRGGL 8 77 441.7680744852922 881.5215960373844 2 441.7692748904228 MULTI CID FTMS 0 0 0 12239 1767288.875 0.944208004354294 19 -1.1893539428710938 11 Unmodified _VPRQRGGL_ ENST00000355112.7_1_15:91354554-91358468:+|nuORF 14.581692164780916 0.6954967302934248 3 VPAE 4 6 49.725 0.0 0.0 5.6408 0.0 0.0 0.0 482.3111971490844 482.3111971490844 36.96058736679344 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 VPAE 5.6408 - 41 + 1 1.371 38918.7 1.0 6837 5411 12239 HBL1_DMSO_200M_050219_1,12250 HBL1_DMSO_200M_050219_1,12250,VPRQRGGL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12251 62.897 32.0 892070.0 25 0 78503.0 27778 PLPPPNHK 8 80 450.2566302429895 898.498707552779 2 450.2572509646416 MULTI CID FTMS 0 0 0 12239 1178154.625 0.5345836585656639 -5 0.4571342468261719 12 Unmodified _PLPPPNHK_ ENST00000475610.1_1_20:57485198-57485273:+|nuORF 11.114462752807354 0.7467182956244686 3 {I|L} 1 7 10.713 0.0 0.0 1.1924 0.0 0.0 767.4033839217228 0.0 767.4033839217228 0.0 -3.979400086720375 -3.979400086720375 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1924 + + 24 + 1 1.371 30347.9 1.0 6838 5411 12239 HBL1_DMSO_200M_050219_1,12251 HBL1_DMSO_200M_050219_1,12251,PLPPPNHK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12252 62.899 90.0 718480.0 25 0 60657.0 + 2377 AQMDYYGTRL 10 80 609.2846769784114 1216.5548010236228 2 609.2855102419853 MULTI CID FTMS 0 0 0 12239 926204.9375 0.5596637790336878 2 -0.1100959777832031 13 Unmodified _AQMDYYGTRL_ ENSG00000157020|ENST00000350697|SEC13;ENST00000397099.1_1_3:10357003-10360966:-|nuORF;ENST00000397102.5_1_3:10355120-10362775:-|nuORF;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 30.7034409873982 0.2788461460996952 3 [QA]{I|L}S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}DM 9 8 45.868 0.0 0.0 3.7703 0.0 0.0 0.0 196.06996446637848 196.06996446637848 28.178732196748584 0.0 0.0 0.0 0 0.8494850021680094 0.8538719643217619 0.3494850021680094 0.4247425010840047 [QA]{I|L}S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}DM 3.7703 - 121 1 1.371 51369.5 1.0 6839 5411 12239 HBL1_DMSO_200M_050219_1,12252 HBL1_DMSO_200M_050219_1,12252,AQMDYYGTRL False True AQMDYYGTRL 62.898856 609.285510241985 25336806.0 12239.0 ENSG00000157020|ENST00000350697|SEC13;;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;;ENST00000397102.5_1_3:10355120-10362775:-|nuORF;;nc|ENSG00000157020|P55735-2|SEC13;;ENST00000397099.1_1_3:10357003-10360966:-|nuORF;;nc|ENSG00000157020|P55735-4|SEC13;;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;;nc|ENSG00000157020|P55735-3|SEC13 6.198648611704509 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12253 62.9 61.0 1513100.0 25 0 141610.0 + 13822 HTPQNLITV 9 119 511.7843405082491 1021.5541280832982 2 511.7855102419853 MULTI CID FTMS 0 0 0 12239 682473.625 0.5821767898256303 -1 0.0952606201171875 14 Unmodified _HTPQNLITV_ ENSG00000213928|ENST00000396864|IRF9;ENST00000557894.5_1_14:24634074-24635402:+|nuORF;ENST00000560311.1_1_14:24634973-24635402:+|nuORF;ENST00000561415.1_1_14:24633725-24635402:+|nuORF 39.94969957227396 0.0757326808254658 3 {I|L}{I|L}N[MN]TV 7 6 35.996 0.0 0.0 3.5236 0.0 0.0 218.1220124600545 0.0 218.1220124600545 0.0 15.920759032626949 0.0 0.0 0 0.0 0.0 1.4436726795685342 0.0 {I|L}{I|L}N[MN]TV 3.5236 - 1148 + 1 1.371 76002.7 1.0 6840 5411 12239 HBL1_DMSO_200M_050219_1,12253 HBL1_DMSO_200M_050219_1,12253,HTPQNLITV True True HTPQNLITV 62.900366 511.785510241985 30036888.0 12239.0 ENST00000560311.1_1_14:24634973-24635402:+|nuORF;;ENST00000561415.1_1_14:24633725-24635402:+|nuORF;;ENST00000557894.5_1_14:24634074-24635402:+|nuORF;;ENSG00000213928|ENST00000396864|IRF9 4.527496894200643 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12254 62.903 112.0 699060.0 25 0 39106.0 + 31247 RLTPKLMEV 9 135 543.8200790313753 1085.6256051295504 2 543.8220092654228 MULTI CID FTMS 0 0 0 12239 662737.375 0.1817844343890037 -4 0.3336639404296875 15 Unmodified _RLTPKLMEV_ ENSG00000147677|ENST00000521861|EIF3H 28.23362336080872 0.1719529537093671 3 [{I|L}T]R[KP]{I|L}MEV 9 2 + 36.864 0.0 0.0 3.3956 3.3956 81.997 0.0 0.0 0.0 0.7378621416091917 20.836030305883185 0.7378621416091917 15.428418131619996 0 0.7059771852360797 0.0 0.5 0.2742275032520141 [{I|L}T]R[KP]{I|L}MEV;{[TV]|[{I|L}S]}KR[Q{I|L}]NEV;{NN|[MP]|[D{I|L}]|[EV]}KK[Q{I|L}][WR];[{I|L}T][KQ][RV]NEV 3.3956;1.9745;0.96009;0.23803 -;-;-;- 329 1 1.371 64837.5 1.0 6841 5411 12239 HBL1_DMSO_200M_050219_1,12254 HBL1_DMSO_200M_050219_1,12254,RLTPKLMEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12255 62.905 113.0 841530.0 25 0 156540.0 21170 LPCHALPG 8 112 404.2132951670079 806.4120374008158 2 404.2135803103447 MULTI CID FTMS 0 0 0 12239 556393.125 1.0 0 0.0 16 Unmodified _LPCHALPG_ ENST00000216160.10_1_22:39822838-39826082:+|nuORF 11.114462752807354 0.7467182956244686 3 {I|L} 1 7 12.764 0.0 0.0 1.5828 0.0 0.0 675.3166527346034 0.0 675.3166527346034 0.0 1.170416030166841 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5828 + + 69 + 1 1.371 75126.4 1.0 6842 5411 12239 HBL1_DMSO_200M_050219_1,12255 HBL1_DMSO_200M_050219_1,12255,LPCHALPG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12256 62.911 335.0 1145300.0 25 0 63538.0 -1 VICCAAVNC 9 222 505.2160258718529 1008.4174988105058 2 505.2159301638603 MULTI CID FTMS 0 0 0 12239 507947.3125 1.0 0 0.0 17 2 Carbamidomethyl (C) _VIC(Carbamidomethyl (C))C(Carbamidomethyl (C))AAVNC_ ENSG00000176946|ENST00000407315|THAP4 13.50788311687929 0.4710407108020397 3 [{I|L}V]P[YN]{I|L}VP 8 -1 33.365 0.0 0.0 3.3086 0.0 0.0 0.0 109.8790358930792 109.8790358930792 16.250612633916997 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}V]P[YN]{I|L}VP 3.3086 - 2497 1 1.371 283142.5 1.0 6843 5411 12239 HBL1_DMSO_200M_050219_1,12256 HBL1_DMSO_200M_050219_1,12256,VICCAAVNC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12257 62.918 386.0 437790.0 25 0 26530.0 28538 PTPIQALT 8 189 420.7434468991572 839.4723408651143 2 420.7437927126884 MULTI CID FTMS 0 0 0 12239 522967.125 0.7875790746437152 -4 0.3336639404296875 18 Unmodified _PTPIQALT_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555324.1_1_14:94545323-94547480:-|nuORF;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 7.910154910731844 0.7763180056447161 3 {I|L} 1 7 16.03 0.0 0.0 1.9096 0.0 0.0 708.3770477516363 0.0 708.3770477516363 0.0 1.962117706886577 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L} 1.9096 + + 60 + 1 1.371 134405.7 1.0 6844 5411 12239 HBL1_DMSO_200M_050219_1,12257 HBL1_DMSO_200M_050219_1,12257,PTPIQALT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12258 62.921 174.0 349290.0 25 0 23619.0 23870 LVKTMRSL 8 99 474.29065596515983 0 474.2908203005791 PEAK CID FTMS 0 0 0 12239 419259.0625 1.0 0 0.0 19 Unmodified _LVKTMRSL_ ENST00000425630.1_1_10:1209489-1209807:+|nuORF 13.50788311687929 0.5021269579892848 3 V 1 7 6.9897 0.0 0.0 0.73843 0.0 0.0 473.2726153502411 371.2069185846313 844.4795339348724 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.73843 + + 65 + 1 1.371 48731.7 1.0 6845 5411 12239 HBL1_DMSO_200M_050219_1,12258 HBL1_DMSO_200M_050219_1,12258,LVKTMRSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12259 62.928 353.0 410210.0 25 0 34927.0 -1 0 146 603.9675200152114 1808.8807306458343 3 603.9749023318291 MULTI CID FTMS 0 0 0 12239 388367.4375 0.0848654898131568 -12 1.1665763854980469 20 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{M(Oxidation (M))|F}[NG]YEN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q 15 -1 + 65.636 0.0 0.0 3.6286 3.6286 76.466 0.0 0.0 0.0 39.18272994198601 6.790973956270676 6.790973956270676 5.568109453757657 0 1.16944517631652 0.0 0.0 1.392159058960253 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{M(Oxidation (M))|F}[NG]YEN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){[CA]|SS}EN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{M(Oxidation (M))|F}CTQMN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}M[C(Carbamidomethyl (C))R]HEN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{M(Oxidation (M))|F}C(Carbamidomethyl (C))[TA]MN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}NEY[NG]{M(Oxidation (M))|F}{I|L}HNQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}M[WH]QMN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}NMQTC{M(Oxidation (M))|F}{I|L}HNQ;{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}NM[TA]C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}HNQ;{[QV]|[N{I|L}]|[RA]|[KV]}PH[TP]TGY[NG]{M(Oxidation (M))|F}{I|L}HNQ 3.6286;3.3207;3.3028;3.2737;3.2643;3.1403;3.0916;2.8145;2.7761;2.7169 -;-;-;-;-;-;-;-;-;- 7483 + 1 1.371 113964.9 1.0 6846 5411 12239 HBL1_DMSO_200M_050219_1,12259 HBL1_DMSO_200M_050219_1,12259, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12261 62.932 1.1 53075000.0 25 0 5848400.0 + 3404 AYVHMVTHF 9 74 368.8480161269438 1103.5222189810313 3 368.8483459353447 MULTI CID FTMS 0 0 0 12260 43887512.0 0.8935232121132214 1 -0.0611953735351562 1 Unmodified _AYVHMVTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 26.88365393820708 0.1891292719743517 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}SHP{M(Oxidation (M))|F} 9 3 + 53.483 0.0 0.0 4.8465 4.8465 72.44 0.0 0.0 0.0 24.965394678904925 5.462207055827975 5.462207055827975 0.4453125937239832 0 0.2614393726401688 2.0 0.4247425010840047 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}SHP{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMV[HT]{M(Oxidation (M))|F} 4.8465;4.8062 -;+ + 197 + 1 1.371 54377.3 1.0 6847 5412 12260 HBL1_DMSO_200M_050219_1,12261 HBL1_DMSO_200M_050219_1,12261,AYVHMVTHF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12262 62.933 2.7 16569000.0 25 0 2678100.0 + 3764 DAHIYLNHI 9 72 548.282804762219 1094.551056591238 2 548.2836791872978 MULTI CID FTMS 0 0 0 12260 20339408.0 0.61246677782931 1 -0.0611953735351562 2 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 74.19965305603844 0.0194755241623067 3 {[DA]|[EG]}H{I|L}Y{I|L}N{I|L}H 9 2 + 83.841 0.0 0.0 7.6599 7.6599 84.595 0.0 0.0 0.0 50.02874091797111 9.710536658395128 9.710536658395128 2.5134875797167666 0 2.4247425010840047 0.7958800173440752 0.0 1.4802046884880935 {[DA]|[EG]}H{I|L}Y{I|L}N{I|L}H;{[DA]|[EG]}H{I|L}{I|L}YN{I|L}H;[H{I|L}]ADY{I|L}N{I|L}H;WH{I|L}{I|L}HS[R{M(Oxidation (M))|F}];[HA]D{I|L}Y{I|L}N{I|L}H;{[DA]|[EG]}H{I|L}{I|L}YGG{I|L}H;{[DA]|[EG]}H{I|L}Y{I|L}GG{I|L}H;[H{I|L}]ADY{I|L}GG{I|L}H;[HA]D{I|L}Y{I|L}GG{I|L}H;[HA]{I|L}DY{I|L}N{I|L}H 7.6599;7.4302;5.9438;5.6998;5.6322;5.5559;5.4662;5.1026;4.7909;4.3916 -;-;-;-;-;-;-;-;-;- 461 + 1 1.371 40477.0 1.0 6848 5412 12260 HBL1_DMSO_200M_050219_1,12262 HBL1_DMSO_200M_050219_1,12262,DAHIYLNHI True True DAHIYLNHI 62.933124 548.283679187298 1338691275.0 12260.0 ENSG00000176890|ENST00000323274|TYMS;;nc|ENSG00000176890|P04818-3|TYMS;;chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;;nc|ENSG00000176890|P04818-2|TYMS;;ENST00000581920.1_1_18:667730-672994:+|nuORF 9.227347056070965 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12263 62.934 2.9 15975000.0 25 0 1736000.0 + 3407 AYVHMVTHF 9 76 552.7677589148686 1103.5209648965372 2 552.7685424685478 MULTI CID FTMS 0 0 0 12260 18496768.0 0.6749189499637122 1 -0.0611953735351562 3 Unmodified _AYVHMVTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 67.34385681178166 0.0221257235307089 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMVTH{M(Oxidation (M))|F} 9 0 + 65.696 0.0 0.0 5.9533 5.9533 91.071 0.0 0.0 0.0 41.0033413501521 7.759169494624132 7.759169494624132 26.76070849133504 0 2.004432191740108 2.0 0.0 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMVTH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV]YHVDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[NP]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AA[NP]{I|L}TH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HVDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHY[PA]H{M(Oxidation (M))|F};[HV]M{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VTH{M(Oxidation (M))|F};[HM]V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VTH{M(Oxidation (M))|F};[HV]M[YG]{I|L}TH{M(Oxidation (M))|F};[HM]V[YG]{I|L}TH{M(Oxidation (M))|F} 5.9533;3.5283;3.4803;3.1202;2.9192;2.8641;2.1474;2.0342;1.6892;1.576 +;-;-;-;-;-;-;-;-;- + 215 + 1 1.371 39151.2 1.0 6849 5412 12260 HBL1_DMSO_200M_050219_1,12263 HBL1_DMSO_200M_050219_1,12263,AYVHMVTHF True True AYVHMVTHF 62.934303 552.768542468548 1247224488.0 12260.0 nc|ENSG00000139644|P55061-2|TMBIM6;;ENSG00000139644|ENST00000267115|TMBIM6 9.665016492207846 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12264 62.935 8.1 3940500.0 25 0 493480.0 -1 YMIDPSGVSY 10 59 574.2523528855575 1146.4901528379148 2 574.2530395388603 MULTI CID FTMS 0 0 0 12260 7059243.5 1.0 0 0.0 4 Oxidation (M) _YM(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 19.256988751693697 0.5244284437930726 3 SY 2 -1 29.464 0.0 0.0 2.5699 0.0 0.0 878.3833155699499 0.0 878.3833155699499 0.0 19.006375246153908 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 SY 2.5699 + + 55 + 1 1.371 30165.6 1.0 6850 5412 12260 HBL1_DMSO_200M_050219_1,12264 HBL1_DMSO_200M_050219_1,12264,YMIDPSGVSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12265 62.937 33.0 3493400.0 25 0 854070.0 -1 0 95 304.1944870166417 606.3744211000834 2 304.1944152712822 MULTI CID FTMS 0 0 0 12260 2961809.0 0.7066462914185372 1 -0.0611953735351562 5 3 YA{I|L}{I|L}K 5 -1 + 65.786 0.0 0.0 10.849 10.849 86.651 0.0 0.0 0.0 33.87449577338572 2.04119982655925 2.04119982655925 2.04119982655925 0 0.4332070678992465 2.0 0.0 0.3494850021680094 YA{I|L}{I|L}K;YA{I|L}K{I|L};Y{I|L}A{I|L}K;Y{I|L}AK{I|L};{I|L}YA{I|L}K;{I|L}YAK{I|L};[{I|L}A]K{I|L}Y;[K{I|L}]A{I|L}Y 10.849;10.512;6.2275;5.8909;5.2626;4.926;3.6924;2.9738 -;-;-;-;-;-;-;- 59 + 1 1.371 98889.8 1.0 6851 5412 12260 HBL1_DMSO_200M_050219_1,12265 HBL1_DMSO_200M_050219_1,12265, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12266 62.938 23.0 1721500.0 25 0 214680.0 + 35848 SVLEDPVHAV 10 73 533.2834375513046 1064.552322169409 2 533.2831298708916 MULTI CID FTMS 0 0 0 12260 1623710.25 0.9762093681418486 1 -0.0611953735351562 6 Unmodified _SVLEDPVHAV_ ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1 30.63653989081413 0.2803493085145199 3 [VS]{I|L}ED 5 5 50.758 0.0 0.0 4.768 0.0 0.0 0.0 518.2743184047367 518.2743184047367 19.542877390256805 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.3807196863200844 0.0 + [VS]{I|L}ED 4.768 + + 109 + 1 1.371 38543.1 1.0 6852 5412 12260 HBL1_DMSO_200M_050219_1,12266 HBL1_DMSO_200M_050219_1,12266,SVLEDPVHAV False True SVLEDPVHAV 62.937839 533.283129870892 32331672.0 12260.0 nc|ENSG00000058262|P61619-3|SEC61A1;;ENSG00000058262|ENST00000243253|SEC61A1 9.053216616312662 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12267 62.939 44.0 1561200.0 25 0 120560.0 40480 VIPVNVPEA 9 85 469.2715476780746 936.5285424229492 2 469.2718688845634 MULTI CID FTMS 0 0 0 12260 1532946.25 0.8050598446174768 1 -0.0611953735351562 7 Unmodified _VIPVNVPEA_ ENSG00000136628|ENST00000366923|EPRS1 18.13498045792455 0.3457906370836843 3 [VP]NVV 5 5 28.199 0.0 0.0 3.0111 0.0 0.0 0.0 425.20216237828055 425.20216237828055 10.708253071758872 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.3807196863200844 [VP]NVV 3.0111 - 76 1 1.371 59492.6 1.0 6853 5412 12260 HBL1_DMSO_200M_050219_1,12267 HBL1_DMSO_200M_050219_1,12267,VIPVNVPEA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12268 62.941 90.0 1086000.0 25 0 84574.0 + 43066 VYIEHRLMM 9 102 596.3033335439259 1190.5921141546517 2 596.3039428591728 MULTI CID FTMS 0 0 0 12260 951159.3125 0.5515929580742134 -1 0.0489006042480468 8 Unmodified _VYIEHRLMM_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-2|MCM7 63.960520009940105 0.0238892913700936 3 VY{I|L}EHR{I|L}MM 9 0 + 85.371 0.0 0.0 7.1705 7.1705 84.549 0.0 0.0 0.0 34.41962823435958 15.110622742990929 15.110622742990929 3.054169578177337 0 2.017220322351953 2.0 0.3807196863200844 0.0 + + VY{I|L}EHR{I|L}MM;VY{I|L}EHRM{I|L}M;[YV]MRHE{I|L}{I|L}M;VY{I|L}M{[RE]|[WV]}H{I|L}M;VYMV[WH]{I|L}{I|L}M;VYM{I|L}{[RE]|[WV]}H{I|L}M;VY{I|L}E{[QS]|[NT]}{[CP]|[EA]}[RP];VY{I|L}E{[QS]|[NT]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VP];[YV]{I|L}[WH]V{I|L}MM;VYMV[W{I|L}]H{I|L}M 7.1705;6.914;5.6359;5.5565;5.2974;4.6308;4.5512;4.4463;4.4289;4.4204 +;-;-;-;-;-;-;-;-;- + 1102 + 1 1.371 78583.3 1.0 6854 5412 12260 HBL1_DMSO_200M_050219_1,12268 HBL1_DMSO_200M_050219_1,12268,VYIEHRLMM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12269 62.944 152.0 699740.0 25 0 100890.0 + 21329 LPFDHSRVI 9 97 361.8700735383975 1082.5883912153924 3 361.8698303103447 MULTI CID FTMS 0 0 0 12260 801125.875 1.0 0 0.0 9 Unmodified _LPFDHSRVI_ ENSG00000111679|ENST00000318974|PTPN6;ENST00000416215.6_1_12:7061038-7070080:+|nuORF;nc|ENSG00000111679|P29350-2|PTPN6;nc|ENSG00000111679|P29350-3|PTPN6;nc|ENSG00000111679|P29350-4|PTPN6 28.49450938151212 0.1686335738423394 3 {I|L}P{M(Oxidation (M))|F}DHS[RV]{I|L} 9 0 + 55.16 0.0 0.0 5.0952 5.0952 74.152 0.0 0.0 0.0 21.38788986023457 3.657424843733637 3.657424843733637 0.8927186071611715 0 0.4247425010840047 0.0 0.805462187404089 0.3807196863200844 + + {I|L}P{M(Oxidation (M))|F}DHS[RV]{I|L};{I|L}{I|L}MDHQT{I|L}{I|L};{I|L}{I|L}MDHS[RV]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[RP]{I|L}EP{I|L};{I|L}P{M(Oxidation (M))|F}DHS[R{I|L}]V;{I|L}{I|L}MDHS[R{I|L}]V;{I|L}P{M(Oxidation (M))|F}{I|L}[YK]SC{I|L};{I|L}{I|L}M{I|L}[YK]SC{I|L};{I|L}{I|L}MDH[AG]T{I|L}{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}[HN]{[ET]|[MV]}{I|L} 5.0952;5.0128;4.7883;4.7565;4.6606;4.3537;4.2138;3.9069;3.8105;3.7567 +;-;-;-;-;-;-;-;-;- + 388 + 1 1.371 97978.9 1.0 6855 5412 12260 HBL1_DMSO_200M_050219_1,12269 HBL1_DMSO_200M_050219_1,12269,LPFDHSRVI False True LPFDHSRVI 62.94408 361.869830310345 5700831.5 12260.0 ENST00000416215.6_1_12:7061038-7070080:+|nuORF;;nc|ENSG00000111679|P29350-4|PTPN6;;ENSG00000111679|ENST00000318974|PTPN6;;nc|ENSG00000111679|P29350-2|PTPN6;;nc|ENSG00000111679|P29350-3|PTPN6 2.688962399959564 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12270 62.949 254.0 482390.0 25 0 43968.0 + 32071 RVLPPSALQSV 11 103 583.8481402842426 1165.6817276352851 2 583.8485595583916 MULTI CID FTMS 0 0 0 12260 713238.8125 0.887949959671251 -10 0.9311599731445312 10 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 79.42699986076722 0.0080827643292781 3 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 70.265 0.0 0.0 6.0278 6.0278 87.029 0.0 0.0 0.0 3.872735630574084 39.62266579556341 3.872735630574084 9.128498242810991 0 1.6549471895720984 0.0 1.3494850021680094 0.0 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;{[TV]|[{I|L}S]}[HK][{I|L}A]A{I|L}QSV;{[TV]|[{I|L}S]}[HK]GVV{I|L}QSV;[{I|L}P][RV][PS]A{I|L}QSV;[RV]{I|L}P[VG]A{I|L}QDV;[RV]{I|L}P[VG]A{I|L}[AG]DV;[RV]{I|L}P[PS]RRW;[Q{I|L}][VP][RV]{I|L}QDV;[{I|L}A]G[VP][RV]{I|L}QDV 6.0278;5.2447;4.5507;4.531;3.9176;3.2146;2.4315;2.1601;2.037;2.0255 +;-;-;-;-;-;-;-;-;- + 434 1 1.371 93909.6 1.0 6856 5412 12260 HBL1_DMSO_200M_050219_1,12270 HBL1_DMSO_200M_050219_1,12270,RVLPPSALQSV True True RVLPPSALQSV 62.948814 583.848559558392 30604784.0 12260.0 nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;nc|ENSG00000178999|Q96GD4-2|AURKB 9.033463795979818 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12271 62.954 285.0 521770.0 25 0 55840.0 + 24156 LYRGADQSITV 11 118 611.8249246950053 1221.6352964568105 2 611.8258544802666 MULTI CID FTMS 0 0 0 12260 573466.5625 0.212222258509554 -3 0.1940536499023437 11 Unmodified _LYRGADQSITV_ REV__ENSG00000130517|ENST00000269919|PGPEP1;REV__nc|ENSG00000130517|Q9NXJ5-2|PGPEP1 41.95555342248728 0.1822715950200113 3 [RV]{M(Oxidation (M))|F}GSQD{I|L}TTV 11 -1 + 98.242 0.0 0.0 8.0418 8.0418 92.422 0.0 0.0 0.0 9.374854021094947 9.374854021094947 9.374854021094947 9.128498242810991 0 1.1861818737241734 0.8538719643217619 1.8882104921644447 0.4247425010840047 [RV]{M(Oxidation (M))|F}GSQD{I|L}TTV;[RV]{M(Oxidation (M))|F}GS[AG]D{I|L}TTV;YR{I|L}DQSG[{I|L}A]TV;YR{I|L}DQS[Q{I|L}]TV;{[TV]|[{I|L}S]}TVHHD{I|L}TTV;{[TV]|[{I|L}S]}TVQ{M(Oxidation (M))|F}N{I|L}TTV;YR{I|L}D[AG]S[Q{I|L}]TV;YR{I|L}D[AG]SG[{I|L}A]TV;{[DS]|[MA]|[CV]|TT}VVHHD{I|L}TTV;[RV][YQ]QD{I|L}TTV 8.0418;7.2946;7.2744;6.9826;6.7266;6.5879;6.2324;6.1795;6.0966;5.9589 -;-;-;-;-;-;-;-;-;- 7031 1 1.371 113798.9 1.0 6857 5412 12260 HBL1_DMSO_200M_050219_1,12271 HBL1_DMSO_200M_050219_1,12271,LYRGADQSITV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12272 62.955 45.0 854310.0 25 0 90489.0 9314 FIGTPYWM 8 67 507.7402512134108 1013.4659494936216 2 507.7402831912041 MULTI CID FTMS 0 0 0 12260 577318.125 0.8991532155973577 1 -0.0611953735351562 12 Unmodified _FIGTPYWM_ ENSG00000011566|ENST00000263881|MAP4K3;ENSG00000012983|ENST00000682126|MAP4K5;ENSG00000065613|ENST00000369755|SLK;ENSG00000071054|ENST00000324219|MAP4K4;ENSG00000072786|ENST00000176763|STK10;ENSG00000104814|ENST00000396857|MAP4K1;ENSG00000123572|ENST00000243300|NRK;ENSG00000141503|ENST00000355280|MINK1;ENSG00000154310|ENST00000436636|TNIK;ENSG00000168067|ENST00000294066|MAP4K2;ENST00000476609.1_1_2:102441885-102476398:+|nuORF;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;nc|ENSG00000011566|Q8IVH8-3|MAP4K3;nc|ENSG00000065613|Q9H2G2-2|SLK;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000104814|Q92918|MAP4K1;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;nc|ENSG00000168067|Q12851-2|MAP4K2 6.354104778181461 0.7857632046190106 3 QSM 3 7 23.188 0.0 0.0 2.2879 0.0 0.0 649.3250936360029 0.0 649.3250936360029 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 QSM 2.2879 - 22 + 1 1.371 35087.7 1.0 6858 5412 12260 HBL1_DMSO_200M_050219_1,12272 HBL1_DMSO_200M_050219_1,12272,FIGTPYWM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12273 62.958 159.0 750020.0 25 0 91586.0 -1 0 125 340.2595054787643 678.5044580243286 2 340.2592956423759 MULTI CID FTMS 0 0 0 12260 563696.4375 1.0 0 0.0 13 3 {I|L}{I|L} 2 -1 29.222 0.0 0.0 4.3068 0.0 0.0 0.0 449.31502295519897 449.31502295519897 16.100796517029785 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 {I|L}{I|L} 4.3068 - 24 + 1 1.371 98230.2 1.0 6859 5412 12260 HBL1_DMSO_200M_050219_1,12273 HBL1_DMSO_200M_050219_1,12273, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12274 62.965 357.0 162330.0 25 0 40793.0 -1 LMSMDSWFSCD 11 90 677.2438258834219 1352.4730988336437 2 677.2472411990166 MULTI CID FTMS 0 0 0 12260 362646.96875 1.0 0 0.0 14 2 Oxidation (M) _LM(Oxidation (M))SM(Oxidation (M))DSWFSCD_ ENSG00000159433|ENST00000290607|STARD9 3.2813086475875832 0.8596665074481906 3 YE[SG]EMVY 8 -1 26.247 0.0 0.0 1.9407 0.0 0.0 376.0904103009781 0.0 376.0904103009781 0.0 10.762743881329513 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 YE[SG]EMVY 1.9407 - 142 1 1.371 48392.5 1.0 6860 5412 12260 HBL1_DMSO_200M_050219_1,12274 HBL1_DMSO_200M_050219_1,12274,LMSMDSWFSCD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12275 62.973 484.0 440980.0 25 0 88061.0 + 5895 DPYKVYRIV 9 182 384.8851537633373 1151.633631890212 3 384.8853332400322 MULTI CID FTMS 0 0 0 12260 291989.375 0.0139597426054895 9 -0.6610450744628906 15 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 30.63653989081413 0.1413794767160703 3 DPYKVYRV{I|L} 9 2 + 63.857 0.0 0.0 5.5449 5.5449 78.126 0.0 0.0 0.0 33.46787486224655 2.3408320603336747 2.3408320603336747 2.3408320603336747 0 0.2887254899964357 1.6989700043360187 0.0 0.0 DPYKVYRV{I|L};DPYKVYR{I|L}V;DPYKVV[YR]{I|L} 5.5449;5.3416;5.1673 -;+;- + 221 + 1 1.371 172035.4 1.0 6861 5412 12260 HBL1_DMSO_200M_050219_1,12275 HBL1_DMSO_200M_050219_1,12275,DPYKVYRIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12276 62.98 386.0 524750.0 25 0 34944.0 + 3265 AYGVRESVF 9 217 514.2636257457585 0 514.2632324099541 PEAK CID FTMS 0 0 0 12260 268433.1875 1.0 0 0.0 16 Unmodified _AYGVRESVF_ ENSG00000215021|ENST00000535923|PHB2;ENST00000542294.1_1_12:7079357-7079730:-|nuORF;ENST00000543465.5_1_12:7077022-7079730:-|nuORF;ENST00000544134.5_1_12:7077746-7079730:-|nuORF;ENST00000546217.1_1_12:7079496-7079730:-|nuORF;nc|ENSG00000215021|Q99623-2|PHB2 29.081581746732265 0.1187435359889091 3 WQ 2 9 11.326 0.0 0.0 1.1033 0.0 0.0 111.00953801319822 598.3360079400999 709.3455459532981 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 WQ 1.1033 - 529 + 1 1.371 154031.2 1.0 6862 5412 12260 HBL1_DMSO_200M_050219_1,12276 HBL1_DMSO_200M_050219_1,12276,AYGVRESVF True True AYGVRESVF 62.980364 514.263232409954 1904417.5 12260.0 ENST00000543465.5_1_12:7077022-7079730:-|nuORF;;ENSG00000215021|ENST00000535923|PHB2;;ENST00000544134.5_1_12:7077746-7079730:-|nuORF;;ENST00000546217.1_1_12:7079496-7079730:-|nuORF;;ENST00000542294.1_1_12:7079357-7079730:-|nuORF;;nc|ENSG00000215021|Q99623-2|PHB2 2.3674941658973694 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12277 62.989 485.0 338400.0 25 0 42037.0 + 14081 IAPPSHLI 8 157 424.2554127473976 846.4962725615952 2 424.2559692263603 MULTI CID FTMS 0 0 0 12260 249881.53125 0.632492779044945 -5 0.3825645446777344 17 Unmodified _IAPPSHLI_ ENSG00000073282|ENST00000264731|TP63;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;nc|ENSG00000073282|Q9H3D4-10|TP63;nc|ENSG00000073282|Q9H3D4-11|TP63;nc|ENSG00000073282|Q9H3D4-12|TP63;nc|ENSG00000073282|Q9H3D4-2|TP63;nc|ENSG00000073282|Q9H3D4-3|TP63;nc|ENSG00000073282|Q9H3D4-4|TP63;nc|ENSG00000073282|Q9H3D4-5|TP63;nc|ENSG00000073282|Q9H3D4-6|TP63;nc|ENSG00000073282|Q9H3D4-7|TP63;nc|ENSG00000073282|Q9H3D4-8|TP63;nc|ENSG00000073282|Q9H3D4-9|TP63 34.18733598223924 0.3315367612694167 3 [{I|L}A]{I|L}[HS]PP{I|L} 8 4 + 48.338 0.0 0.0 5.7104 5.7104 80.234 0.0 0.0 0.0 33.64516253185087 10.479174793482493 10.479174793482493 3.180726507867924 0 0.4247425010840047 2.0 0.4247425010840047 0.0 [{I|L}A]{I|L}[HS]PP{I|L};[{I|L}A]PPSH{I|L}{I|L};[{I|L}A]PPS{I|L}{I|L}H 5.7104;5.3346;2.9719 -;+;- + 267 + 1 1.371 128576.5 1.0 6863 5412 12260 HBL1_DMSO_200M_050219_1,12277 HBL1_DMSO_200M_050219_1,12277,IAPPSHLI False True IAPPSHLI 62.988943 424.25596922636 9308070.0 12260.0 nc|ENSG00000073282|Q9H3D4-8|TP63;;nc|ENSG00000073282|Q9H3D4-2|TP63;;nc|ENSG00000073282|Q9H3D4-7|TP63;;nc|ENSG00000073282|Q9H3D4-6|TP63;;nc|ENSG00000073282|Q9H3D4-11|TP63;;nc|ENSG00000073282|Q9H3D4-4|TP63;;nc|ENSG00000073282|Q9H3D4-12|TP63;;nc|ENSG00000073282|Q9H3D4-5|TP63;;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;;nc|ENSG00000073282|Q9H3D4-9|TP63;;nc|ENSG00000073282|Q9H3D4-10|TP63;;ENSG00000073282|ENST00000264731|TP63;;nc|ENSG00000073282|Q9H3D4-3|TP63 4.307912270228068 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12279 63.002 526.0 81235.0 25 0 20537.0 -1 0 35 1088.4494025876809 3262.326378363242 3 1089.118945300579 MULTI CID FTMS 0 0 0 12278 96800.5234375 0.6171508985159251 1 -0.043670654296875 1 3 MN 2 -1 15.217 0.0 0.0 0.46643 0.0 0.0 1928.6717895954669 1085.5145968072875 3014.1863864027546 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 MN 0.46643 - 13 + 1 1.353 48037.3 1.0 6864 5413 12278 HBL1_DMSO_200M_050219_1,12279 HBL1_DMSO_200M_050219_1,12279, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12280 63.003 22.0 1881000.0 25 0 184340.0 + 3010 AVISKFWKS 9 75 533.3083432207789 1064.6021335083576 2 533.3085204958916 MULTI CID FTMS 0 0 0 12278 1227825.125 1.0 0 0.0 2 Unmodified _AVISKFWKS_ ENSG00000173163|ENST00000311832|COMMD1;ENST00000471704.1_1_2:62132813-62228123:+|nuORF;nc|ENSG00000173163|Q8N668-2|COMMD1 32.78568957990786 0.1150597335874693 3 {[VA]|[{I|L}G]}{I|L}SK 5 4 39.693 0.0 0.0 3.7284 0.0 0.0 0.0 563.2627047174436 563.2627047174436 23.037275116073346 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {[VA]|[{I|L}G]}{I|L}SK 3.7284 + + 279 + 1 1.353 39151.1 1.0 6865 5413 12278 HBL1_DMSO_200M_050219_1,12280 HBL1_DMSO_200M_050219_1,12280,AVISKFWKS True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12281 63.004 50.0 1129300.0 25 0 319200.0 + 40117 VGLGHNAR 8 79 412.23031496903735 822.4460770048747 2 412.2303649783134 MULTI CID FTMS 0 0 0 12278 804386.0 0.5761140043744674 -3 0.2053565979003906 3 Unmodified _VGLGHNAR_ REV__ENST00000533444.1_1_8:145150552-145150603:+|nuORF 0.7936320650641473 0.8195151834710337 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.353 50638.1 1.0 6866 5413 12278 HBL1_DMSO_200M_050219_1,12281 HBL1_DMSO_200M_050219_1,12281,VGLGHNAR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12282 63.006 64.0 1666800.0 25 0 115130.0 15541 IPVVDRTPL 9 124 505.3044668685613 1008.5943808039226 2 505.3047973513603 MULTI CID FTMS 0 0 0 12278 708975.625 0.8863596176176907 -2 0.1100959777832031 4 Unmodified _IPVVDRTPL_ ENSG00000165733|ENST00000374518|BMS1;ENST00000399449.3_1_10:75487125-75488312:-|nuORF;ENST00000453174.7_2_10:81666360-81667538:+|nuORF 25.399314129420983 0.2080152500878129 3 {I|L}PV{I|L} 4 5 51.771 0.0 0.0 5.133 0.0 0.0 0.0 583.2858148616524 583.2858148616524 33.702327466270994 0.0 0.0 0.0 0 0.7614393726401688 1.2218487496163564 0.0 0.0 {I|L}PV{I|L} 5.133 - 402 + 1 1.353 83460.2 1.0 6867 5413 12278 HBL1_DMSO_200M_050219_1,12282 HBL1_DMSO_200M_050219_1,12282,IPVVDRTPL False True LPVLPRSEV 63.005551 505.30479735136 7855861.5 12278.0 ENSG00000115042|ENST00000233379|FAHD2A;;ENST00000463940.1_1_2:96071303-96072959:+|nuORF;;ENST00000470100.1_1_2:96072692-96076397:+|nuORF;;ENST00000607780.5_1_2:96676383-96687353:+|nuORF 1.140625645716985 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12283 63.011 296.0 565910.0 25 0 21824.0 + -1 SEGDAYPNGLQV 12 163 625.2881547178409 1248.5617565024818 2 625.2886230349541 MULTI CID FTMS 0 0 0 12278 535561.6875 0.9507391234014432 -1 0.0611953735351562 5 Carbamidomethyl (C) _RLENDC(Carbamidomethyl (C))CLVQ_ ENSG00000117298|ENST00000374893|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF 27.628801355627647 0.3479284626772844 3 [AG]VGPQVQA 9 -1 40.991 0.0 0.0 3.2831 0.0 0.0 0.0 438.12392626250056 438.12392626250056 4.1134555583158345 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3054621874040891 [AG]VGPQVQA 3.2831 - 4128 1 1.353 130844.6 1.0 6868 5413 12278 HBL1_DMSO_200M_050219_1,12283 HBL1_DMSO_200M_050219_1,12283,RLENDCCLVQ False False SEGDAYPNGLQV 63.010993 625.288623034954 6122994.5 12278.0 ENSG00000117298|ENST00000374893|ECE1;;nc|ENSG00000117298|P42892-3|ECE1;;nc|ENSG00000117298|P42892-4|ECE1;;ENST00000526194.5_1_1:21560049-21616919:-|nuORF 6.943090120951335 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12284 63.013 69.0 1044800.0 25 0 85158.0 + 19591 IFPEGRPVV 9 91 507.2914090498513 1012.5682651665028 2 507.2922241091728 MULTI CID FTMS 0 0 0 12278 481748.25 0.6713943172030873 -9 0.7472000122070312 6 Unmodified _LFYTLLIM_ ENSG00000269858|ENST00000303961|EGLN2;ENST00000593477.1_1_19:41312411-41313222:+|nuORF;nc|ENSG00000269858|Q96KS0-2|EGLN2 10.183394434864962 0.7604730176254005 3 SM 2 7 21.964 0.0 0.0 2.1691 0.0 0.0 776.4844161448215 0.0 776.4844161448215 0.0 1.5186375580366729 0.0 0.0 0 0.0 0.0 0.25 0.0 SM 2.1691 - 173 + 1 1.353 60724.1 1.0 6869 5413 12278 HBL1_DMSO_200M_050219_1,12284 HBL1_DMSO_200M_050219_1,12284,LFYTLLIM False False IFPEGRPVV 63.012622 507.292224109173 4883967.0 12278.0 ENSG00000269858|ENST00000303961|EGLN2;;ENST00000593477.1_1_19:41312411-41313222:+|nuORF;;nc|ENSG00000269858|Q96KS0-2|EGLN2 2.326605329910914 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12285 63.019 332.0 680060.0 25 0 29419.0 + + -1 NQVETLEKL 9 218 537.2903436613601 1072.56613438952 2 537.2947875857353 MULTI CID FTMS 0 0 0 12278 383756.96875 0.0919914520218455 -9 0.7472000122070312 7 Oxidation (M) _GGQVRTIM(Oxidation (M))PV_ ENSG00000138095|ENST00000260665|LRPPRC 29.081581746732265 0.3152867722954398 3 {[QN]|[E{I|L}]|[KN]}VET{I|L}EK{I|L} 9 -1 + 49.668 0.0 0.0 4.6308 4.6308 80.861 0.0 0.0 0.0 10.307860017889851 7.067953418479753 7.067953418479753 7.067953418479753 0 0.2302046884880938 0.5686362358410126 1.110924374808178 0.1421590589602531 {[QN]|[E{I|L}]|[KN]}VET{I|L}EK{I|L};{[QN]|[E{I|L}]|[KN]}VET{I|L}E{I|L}K;{[QN]|[E{I|L}]|[KN]}VET{I|L}{[TV]|[{I|L}S]}G{I|L};{[QN]|[E{I|L}]|[KN]}VET{I|L}{[TV]|[{I|L}S]}AV;{[QN]|[E{I|L}]|[KN]}VM[K{I|L}]V{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}V[Q{I|L}]{I|L}EMV;GGQV[Q{I|L}]{I|L}EMV;{[QN]|[E{I|L}]|[KN]}VET{I|L}{[SA]|[TG]}V{I|L};{[QN]|[E{I|L}]|[KN]}VET{I|L}{[SA]|[TG]}{I|L}V;GGQVM[K{I|L}]V{[QN]|[E{I|L}]|[KN]} 4.6308;3.9718;3.1949;3.1272;2.9096;2.8391;2.5518;2.4808;2.4131;2.2263 -;-;-;-;-;-;-;-;-;- 3477 + 1 1.353 173359.8 1.0 6870 5413 12278 HBL1_DMSO_200M_050219_1,12285 HBL1_DMSO_200M_050219_1,12285,GGQVRTIMPV False False NQVETLEKL 63.018649 537.294787585735 7848058.0 12278.0 ENSG00000138095|ENST00000260665|LRPPRC 4.520713488260905 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12286 63.025 376.0 249230.0 25 0 10186.0 -1 VFQTCDINAFL 11 108 664.3235948983728 1326.6326368635457 2 664.3238403201103 MULTI CID FTMS 0 0 0 12278 307752.15625 1.0 0 0.0 8 Carbamidomethyl (C) _VFQTC(Carbamidomethyl (C))DINAFL_ ENSG00000174358|ENST00000304460|SLC6A19 12.240655878213236 0.7805268987462184 3 [DN]{M(Oxidation (M))|F}VK[PG]T[CS]{M(Oxidation (M))|F}{I|L} 12 -1 + 43.253 0.0 0.0 3.2604 3.2604 80.34 0.0 0.0 0.0 3.881801713828807 9.909936608861216 3.881801713828807 9.909936608861216 0 0.8807196863200843 0.0 0.6643943297944485 0.0 [DN]{M(Oxidation (M))|F}VK[PG]T[CS]{M(Oxidation (M))|F}{I|L};[DN]{M(Oxidation (M))|F}VK[PG]T{[WT]|[RM]}Y;[DN]{M(Oxidation (M))|F}VK[TP]G[CS]{M(Oxidation (M))|F}{I|L};[DN]{M(Oxidation (M))|F}VK[PG]T[YG]MV;[DN]{M(Oxidation (M))|F}VK[NS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L};[DN]{M(Oxidation (M))|F}VK[TP][C(Carbamidomethyl (C))S]{M(Oxidation (M))|F}{I|L};[DN]{M(Oxidation (M))|F}VK[MN]{[CP]|[EA]}{M(Oxidation (M))|F}{I|L};[DN]{M(Oxidation (M))|F}VK[TP]G{[WT]|[RM]}Y;[DN]{M(Oxidation (M))|F}VK[TP]G[YG]MV;[DN]{M(Oxidation (M))|F}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[CP]|[EA]}{M(Oxidation (M))|F}{I|L} 3.2604;2.5134;2.4932;2.258;2.2217;1.9948;1.8275;1.7462;1.4908;1.3007 -;-;-;-;-;-;-;-;-;- 595 + 1 1.353 73229.0 1.0 6871 5413 12278 HBL1_DMSO_200M_050219_1,12286 HBL1_DMSO_200M_050219_1,12286,VFQTCDINAFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12287 63.033 401.0 500370.0 25 0 24295.0 + -1 NMFCTRLSRCF 11 154 746.3354360271445 1490.656319121089 2 746.3380615115166 MULTI CID FTMS 0 0 0 12278 299071.75 0.32585918783148 -4 0.2552490234375 9 2 Carbamidomethyl (C) _NMFC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 19.361941925380144 0.6323962752489956 3 NMPN{I|L}NADQRS[MT] 13 -1 + 119.04 0.0 0.0 7.9857 7.9857 86.798 0.0 0.0 0.0 80.00638540386782 2.40691628181078 2.40691628181078 3.3765889102614324 0 1.0501648626366045 1.5228787452803376 0.7302046884880937 1.9802046884880933 NMPN{I|L}NADQRS[MT];NMPN{I|L}NADQRDG{M(Oxidation (M))|F};NMPN{I|L}NAD[AG]RS[MT];NMPGG{I|L}NADQRS[MT];NMPN{I|L}GGADQRS[MT];NMPN{I|L}NADQ[VG]S[MT];NMPN{I|L}NWQRDG{M(Oxidation (M))|F};NMPN{I|L}GGADQRDG{M(Oxidation (M))|F};NMPN{I|L}NAD[AG]RDG{M(Oxidation (M))|F};NMPGG{I|L}NADQRDG{M(Oxidation (M))|F} 7.9857;7.7592;7.3771;7.3771;7.3771;7.3771;7.3136;7.1506;7.1506;7.1506 -;-;-;-;-;-;-;-;-;- 10217 + 1 1.353 142072.8 1.0 6872 5413 12278 HBL1_DMSO_200M_050219_1,12287 HBL1_DMSO_200M_050219_1,12287,NMFCTRLSRCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12289 63.037 20.0 3398100.0 25 0 335210.0 + 24898 MPNTRPPII 9 83 519.791667430783 1037.568781928366 2 519.7925292849541 MULTI CID FTMS 0 0 0 12288 1951495.0 0.1794121151432487 9 -0.6621589660644531 1 Unmodified _MPNTRPPII_ ENSG00000084774|ENST00000264705|CAD 34.40172386719151 0.1061884637610825 3 MPNTR 5 4 67.251 0.0 0.0 6.4816 0.0 0.0 0.0 435.26165192359457 435.26165192359457 51.05265951879794 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.4247425010840047 + MPNTR 6.4816 + + 70 + 1 1.353 62020.2 1.0 6873 5414 12288 HBL1_DMSO_200M_050219_1,12289 HBL1_DMSO_200M_050219_1,12289,MPNTRPPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12290 63.038 23.0 1919800.0 25 0 324680.0 -1 0 68 434.24358628486095 433.23630981826096 1 434.2436401247978 MULTI CID FTMS 0 0 0 12288 1394095.5 0.3272239287113812 -2 0.1048660278320312 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.353 40656.7 1.0 6874 5414 12288 HBL1_DMSO_200M_050219_1,12290 HBL1_DMSO_200M_050219_1,12290, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12291 63.039 39.0 2153800.0 25 0 267850.0 + 41617 VPPPLAKAI 9 83 453.29442015475456 904.5742873763091 2 453.2947265505791 MULTI CID FTMS 0 0 0 12288 1462596.375 0.5329920859990293 -3 0.1537666320800781 3 Unmodified _VPPPLAKAI_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;ENST00000588913.5_1_19:10244345-10246231:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 34.10243960390752 0.1078313939113124 3 VPP[{I|L}P]AKA{I|L} 9 0 + 59.619 0.0 0.0 6.5908 6.5908 87.258 0.0 0.0 0.0 34.54705724461447 9.173582218428676 9.173582218428676 6.989700043360188 0 0.4247425010840047 2.0 0.0 0.0 + + VPP[{I|L}P]AKA{I|L};VP{I|L}{[HG]|PP}AKA{I|L} 6.5908;5.8181 +;- + 253 + 1 1.353 71435.3 1.0 6875 5414 12288 HBL1_DMSO_200M_050219_1,12291 HBL1_DMSO_200M_050219_1,12291,VPPPLAKAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12292 63.041 54.0 1545500.0 25 0 85436.0 + 8112 EPHQVYVQI 9 112 556.7899292640104 1111.5653055948208 2 556.7905761599541 MULTI CID FTMS 0 0 0 12288 934084.0 0.2824103002765875 3 -0.2284431457519531 4 Unmodified _EPHQVYVQI_ ENSG00000085840|ENST00000371568|ORC1 43.85829265575387 0.0542763391141878 3 [AG]VHPEYVQ{I|L} 10 5 + 52.802 0.0 0.0 4.7503 4.7503 73.929 0.0 0.0 0.0 6.894246864297884 10.452490459521968 6.894246864297884 1.4612803567823818 0 0.6237125054200234 1.3979400086720375 1.3807196863200843 0.0 [AG]VHPEYVQ{I|L};[AG]HVPEYVQ{I|L};[AG]VHPYEVQ{I|L};[AG]VHYPEVQ{I|L};[AG]HVPYEVQ{I|L};[AG]HVYPEVQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}HPEYVQ{I|L};[HQ]VPEYVQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}HPYEVQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}HYPEVQ{I|L} 4.7503;4.6188;4.3004;4.3004;4.169;4.169;4.13;3.9986;3.6802;3.6802 -;-;-;-;-;-;-;-;-;- 1109 1 1.353 69543.7 1.0 6876 5414 12288 HBL1_DMSO_200M_050219_1,12292 HBL1_DMSO_200M_050219_1,12292,EPHQVYVQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12293 63.042 15.0 1653500.0 25 0 133770.0 10332 FSEKKDTM 8 63 493.23684401443967 984.4591350956794 2 493.2380859255791 MULTI CID FTMS 0 0 0 12288 908049.0 0.1044748729628786 2 -0.1874847412109375 5 Unmodified _FSEKKDTM_ ENST00000369491.1_1_1:116948227-116948512:-|nuORF;nc|ENSG00000203865|Q5TC04|ATP1A1-AS1 9.347437153973935 0.7675937258251505 3 M 1 7 14.604 0.0 0.0 1.4835 0.0 0.0 835.407726259545 0.0 835.407726259545 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 1.4835 + + 20 + 1 1.353 25245.7 1.0 6877 5414 12288 HBL1_DMSO_200M_050219_1,12293 HBL1_DMSO_200M_050219_1,12293,FSEKKDTM False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 12294 63.043 45.0 1415500.0 25 0 112040.0 + -1 MPMPLLLV 8 100 465.26459364999903 928.514634366798 2 465.2660400271416 MULTI CID FTMS 0 0 0 12288 786987.875 0.2614196601741191 -6 0.3981399536132812 6 Oxidation (M) _MPM(Oxidation (M))PLLLV_ REV__ENSG00000186881|ENST00000334726|OR13F1 17.086550045450526 0.6584923310065985 3 KMSV 4 -1 33.928 0.0 0.0 3.654 0.0 0.0 465.26289565254064 0.0 465.26289565254064 0.0 5.344406447039063 0.0 0.0 0 0.5 0.0 0.0 0.0 KMSV 3.654 - 117 1 1.353 56378.0 1.0 6878 5414 12288 HBL1_DMSO_200M_050219_1,12294 HBL1_DMSO_200M_050219_1,12294,MPMPLLLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12295 63.049 328.0 680310.0 25 0 55850.0 + 31074 RLLDEEISRV 10 127 410.5664041429059 1228.6773830289178 3 410.5664245486259 MULTI CID FTMS 0 0 0 12288 731472.5625 1.0 0 0.0 7 Unmodified _RLLDEEISRV_ ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI 53.7980654928069 0.0578593193895906 3 [R{I|L}]{I|L}DEE 6 4 51.106 0.0 0.0 4.1594 0.0 0.0 0.0 470.2718900336819 470.2718900336819 27.911514419051542 0.0 0.0 0.0 0 1.079689690656103 1.3010299956639813 0.5796896906561032 0.3252574989159953 + [R{I|L}]{I|L}DEE 4.1594 + + 592 1 1.353 176868.7 1.0 6879 5414 12288 HBL1_DMSO_200M_050219_1,12295 HBL1_DMSO_200M_050219_1,12295,RLLDEEISRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12296 63.054 299.0 455340.0 25 0 32686.0 + 16441 KAIDIYEQV 9 152 539.7927276481686 1077.570902363137 2 539.7927123904228 MULTI CID FTMS 0 0 0 12288 657606.5625 0.2126359366182444 3 -0.2284431457519531 8 Unmodified _KAIDIYEQV_ ENSG00000105402|ENST00000263354|NAPA;ENST00000597778.5_1_19:47995938-47996286:-|nuORF 57.72198328787511 0.0273433238377839 3 {NN|[MP]|[D{I|L}]|[EV]}AK{I|L}YEQV 9 4 + 72.005 0.0 0.0 6.6822 6.6822 86.331 0.0 0.0 0.0 12.245462655597096 16.478174818886373 12.245462655597096 5.822646798160562 0 0.6549471895720985 0.6989700043360187 1.3851518780601924 0.0 {NN|[MP]|[D{I|L}]|[EV]}AK{I|L}YEQV;{NN|[MP]|[D{I|L}]|[EV]}AKY{I|L}EQV;{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}YE[AG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}KD{I|L}EQV;{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}{I|L}YEQV;{NN|[MP]|[D{I|L}]|[EV]}AKY{I|L}E[AG]V;[KA]{I|L}D{I|L}YEQV;{NN|[MP]|[D{I|L}]|[EV]}AKYE{I|L}QV;{[QN]|[E{I|L}]|[KN]}GK{I|L}YEQV;[AG]V{[TV]|[{I|L}S]}{I|L}YEQV 6.6822;6.1418;5.8276;5.5458;5.411;5.2873;5.2714;5.1652;5.0753;5.0018 -;-;-;-;-;-;+;-;-;- + 3342 1 1.353 111988.6 1.0 6880 5414 12288 HBL1_DMSO_200M_050219_1,12296 HBL1_DMSO_200M_050219_1,12296,KAIDIYEQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12297 63.056 63.0 1296000.0 25 0 209160.0 + 29375 QKTVMIPP 8 121 457.2640638459234 912.5135747586468 2 457.2644225955009 MULTI CID FTMS 0 0 0 12288 611144.875 0.3370531140930085 2 -0.1874847412109375 9 Unmodified _QKTVMIPP_ REV__ENSG00000196091|ENST00000361466|MYBPC1;REV__nc|ENSG00000196091|Q00872-10|MYBPC1;REV__nc|ENSG00000196091|Q00872-2|MYBPC1;REV__nc|ENSG00000196091|Q00872-3|MYBPC1;REV__nc|ENSG00000196091|Q00872-5|MYBPC1;REV__nc|ENSG00000196091|Q00872-6|MYBPC1;REV__nc|ENSG00000196091|Q00872-7|MYBPC1;REV__nc|ENSG00000196091|Q00872-8|MYBPC1;REV__nc|ENSG00000196091|Q00872-9|MYBPC1;REV__nc|ENSG00000196091|Q00872|MYBPC1 5.230669730166228 0.792582437072536 3 [{I|L}P]EA 4 -1 10.754 0.0 0.0 1.1785 0.0 0.0 0.0 499.2733763546032 499.2733763546032 0.2692208912748164 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [{I|L}P]EA 1.1785 - 77 1 1.353 69612.9 1.0 6881 5414 12288 HBL1_DMSO_200M_050219_1,12297 HBL1_DMSO_200M_050219_1,12297,QKTVMIPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12298 63.059 151.0 1076900.0 25 0 60111.0 + 6297 DVDRYEMS 8 176 507.7145784483955 1013.414603963591 2 507.7146179080009 MULTI CID FTMS 0 0 0 12288 579162.1875 0.5973407986899313 5 -0.4090423583984375 10 Unmodified _DVDRYEMS_ REV__ENSG00000004534|ENST00000266022|RBM6;REV__nc|ENSG00000004534|P78332-3|RBM6 11.640296217721598 0.738950129755968 3 QSM 3 -1 25.59 0.0 0.0 2.5252 0.0 0.0 649.2734429301911 0.0 649.2734429301911 0.0 6.126342309407544 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 QSM 2.5252 - 828 + 1 1.353 128660.1 1.0 6882 5414 12288 HBL1_DMSO_200M_050219_1,12298 HBL1_DMSO_200M_050219_1,12298,DVDRYEMS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12299 63.062 157.0 1191800.0 25 0 84830.0 + 22981 LSGLLSPALT 10 177 486.290750407654 970.566947882108 2 486.2928954958916 MULTI CID FTMS 0 0 0 12288 440446.875 0.3962606431982496 3 -0.2284431457519531 11 Unmodified _LSGLLSPALT_ ENSG00000110375|ENST00000264031|UPK2;ENST00000534788.1_1_11:118795899-118828340:+|nuORF 29.081581746732265 0.3152867722954398 3 {[TV]|[{I|L}S]}SPQ{I|L}{I|L}[{I|L}T] 9 6 + 32.666 0.0 0.0 3.3656 3.3656 71.166 0.0 0.0 0.0 4.829022044314471 1.4491754976996276 1.4491754976996276 2.085521743960328 0 0.3054621874040891 2.0 0.3703715150305281 0.0 {[TV]|[{I|L}S]}SPQ{I|L}{I|L}[{I|L}T];{[TV]|[{I|L}S]}SPQ{I|L}T{I|L}{I|L};{[TV]|[{I|L}S]}VA{I|L}[NG]V[KA];{[TV]|[{I|L}S]}SPQ{I|L}K[KA];{[TV]|[{I|L}S]}VA{I|L}[RN][QA];[VS]TPQ{I|L}{I|L}[{I|L}T];[VS]TPQ{I|L}T{I|L}{I|L};{[TV]|[{I|L}S]}SPT[Q{I|L}]{I|L}{I|L};[VS]{I|L}A{I|L}[NG]V[KA];[VS]TPQ{I|L}K[KA] 3.3656;3.1507;3.082;3.0509;2.9006;2.8681;2.6532;2.602;2.5845;2.5534 -;-;-;-;-;-;-;-;-;- 2326 1 1.353 143035.1 1.0 6883 5414 12288 HBL1_DMSO_200M_050219_1,12299 HBL1_DMSO_200M_050219_1,12299,LSGLLSPALT False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12300 63.069 415.0 395470.0 25 0 18136.0 + 13294 HIVEALETDV 10 171 563.2925350003419 1124.5705170674837 2 563.2938110232353 MULTI CID FTMS 0 0 0 12288 290117.03125 0.2119088416348307 -3 0.1537666320800781 12 Unmodified _HIVEALETDV_ ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK 63.22749603027936 0.0281198777558511 3 [H{I|L}]VEA{I|L}ETDV 10 0 + 77.628 0.0 0.0 6.9029 6.9029 84.359 0.0 0.0 0.0 17.26998727936263 52.831575262407625 17.26998727936263 3.4948500216800937 0 0.908628003777275 1.3010299956639813 0.9436726795685342 0.0 + + [H{I|L}]VEA{I|L}ETDV;[H{I|L}]VEA{I|L}TEDV;[H{I|L}]VEAE{I|L}TDV;[H{I|L}]EVA{I|L}ETDV;[H{I|L}]EVA{I|L}TEDV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}HA{I|L}ETDV;[H{I|L}]EAV{I|L}ETDV;[H{I|L}]EVAE{I|L}TDV;{I|L}{I|L}DHA{I|L}ETDV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}HA{I|L}TEDV 6.9029;6.5921;6.1108;6.0137;5.7029;5.3116;5.2622;5.2216;5.1075;5.0008 +;-;-;-;-;-;-;-;-;- + 2808 1 1.353 128091.8 1.0 6884 5414 12288 HBL1_DMSO_200M_050219_1,12300 HBL1_DMSO_200M_050219_1,12300,HIVEALETDV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12301 63.079 564.0 111080.0 25 0 20719.0 -1 0 36 1088.4494025876809 3262.326378363242 3 1088.782641589642 MULTI CID FTMS 0 0 0 12288 231452.984375 1.0 0 0.0 13 3 ND 2 -1 7.0783 0.0 0.0 0.21697 0.0 0.0 2060.774084517342 969.4639376276 3030.238022144942 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ND 0.21697 - 11 + 1 1.353 57532.8 1.0 6885 5414 12288 HBL1_DMSO_200M_050219_1,12301 HBL1_DMSO_200M_050219_1,12301, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12302 63.083 199.0 789930.0 25 0 62479.0 + 10875 GAFVHFHGV 9 140 324.16803011028134 969.482260931044 3 324.1682311892509 MULTI CID FTMS 0 0 0 12288 236648.046875 0.0863008360656231 -3 0.1537666320800781 14 Unmodified _GAFVHFHGV_ ENSG00000006831|ENST00000357103|ADIPOR2 45.7499826716795 0.0496882803020414 3 [AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}HGV 9 0 + 61.297 0.0 0.0 6.3226 6.3226 84.225 0.0 0.0 0.0 15.322223439628516 11.471449248951942 11.471449248951942 4.771212547196626 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + + [AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}HGV;[AG]V{M(Oxidation (M))|F}H{M(Oxidation (M))|F}HGV;[AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}V{[HG]|PP};[AG]V{M(Oxidation (M))|F}H{M(Oxidation (M))|F}V{[HG]|PP};[AG]{M(Oxidation (M))|F}VV{[{M(Oxidation (M))|F}H]|[RQ]}{[HG]|PP};[AG]V{M(Oxidation (M))|F}V{[{M(Oxidation (M))|F}H]|[RQ]}{[HG]|PP};[AG][YR][NP]HGV;[AG][YR][NP]V{[HG]|PP};[AG][YR]V[NP]{[HG]|PP};[AG]V[YR][NP]{[HG]|PP} 6.3226;5.8305;4.8279;4.3358;3.2043;2.7122;2.5833;1.0886;0.77811;0.77811 +;-;-;-;-;-;-;-;-;- + 470 + 1 1.353 125529.7 1.0 6886 5414 12288 HBL1_DMSO_200M_050219_1,12302 HBL1_DMSO_200M_050219_1,12302,GAFVHFHGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12303 63.092 489.0 243880.0 25 0 19560.0 + + -1 FPDPNGTRLV 10 163 557.23770544905 1112.4608579649 2 558.7392455935478 MULTI CID FTMS 0 0 0 12288 185590.796875 0.5676479578494373 2 -0.1874847412109375 15 Carbamidomethyl (C),Oxidation (M) _SNLPC(Carbamidomethyl (C))M(Oxidation (M))YNV_ ENST00000512095.5_1_4:39217537-39276579:+|nuORF;ENSG00000157796|ENST00000399820|WDR19 7.910154910731844 0.6385446671287552 3 [DP]V 3 -1 18.996 0.0 0.0 1.7076 0.0 0.0 0.0 798.2897818753094 798.2897818753094 0.0683942453030574 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [DP]V 1.7076 - 674 1 1.353 97380.3 1.0 6887 5414 12288 HBL1_DMSO_200M_050219_1,12303 HBL1_DMSO_200M_050219_1,12303,SNLPCMYNV False False FPDPNGTRLV 63.091857 558.7391 4867535.5 12288.0 ENST00000512095.5_1_4:39217537-39276579:+|nuORF;;ENSG00000157796|ENST00000399820|WDR19 2.8075973192850747 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12304 63.102 584.0 352810.0 25 0 54636.0 + + 36659 TASPRSLLV 9 183 472.2816716435221 942.5487903538442 2 472.2812988162041 MULTI CID FTMS 0 0 0 12288 181874.375 1.0 0 0.0 16 Unmodified _TAVVTRPTV_ ENSG00000049089|ENST00000372748|COL9A2 43.85829265575387 0.0542763391141878 3 [TA]S{I|L}VRPTV 9 -1 + 54.632 0.0 0.0 5.7962 5.7962 82.132 0.0 0.0 0.0 14.899829728611252 8.397158490548229 8.397158490548229 4.503187623076954 0 1.4291746928241125 2.0 0.6237125054200234 0.0 [TA]S{I|L}VRPTV;[TA]S{I|L}VRTPV;[TA]S{I|L}VRPS{I|L};[TA]P[QT][{I|L}T]{I|L}V;[{I|L}T]QPT[TA]{I|L}V;[{I|L}T]T[QP][TA]{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}RR[TA]{I|L}V;[{I|L}T]QPT{I|L}ATV;[Q{I|L}]TPT[TA]{I|L}V;{[QN]|[E{I|L}]|[KN]}V[QA][TA]{I|L}V 5.7962;5.3184;4.9053;4.2154;3.8917;3.4668;3.4072;3.3869;3.3402;3.2986 -;-;-;-;-;-;-;-;-;- 1423 + 1 1.353 159111.3 1.0 6888 5414 12288 HBL1_DMSO_200M_050219_1,12304 HBL1_DMSO_200M_050219_1,12304,TAVVTRPTV False False TASPRSLLV 63.102065 472.281298816204 1585213.0 12288.0 ENSG00000049089|ENST00000372748|COL9A2 -0.065698484579722 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12305 63.113 528.0 151460.0 25 0 7661.7 + -1 IPSPVIFCIL 10 143 579.8339686397936 1157.6533843463872 2 579.8351928591728 MULTI CID FTMS 0 0 0 12288 122403.921875 0.1835081933726842 -6 0.3981399536132812 17 Carbamidomethyl (C) _IPSPVIFC(Carbamidomethyl (C))IL_ REV__ENST00000242057.8_1_7:17374584-17375271:+|nuORF 15.847184025352805 0.5816416552707754 3 [{I|L}P]SPQG{[QV]|[N{I|L}]|[RA]|[KV]}SP{I|L} 11 -1 71.603 0.0 0.0 6.1852 0.0 0.0 0.0 51.0049589945626 51.0049589945626 35.695990759876096 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.0356668758921828 0.3054621874040891 [{I|L}P]SPQG{[QV]|[N{I|L}]|[RA]|[KV]}SP{I|L} 6.1852 - 2902 1 1.353 67183.1 1.0 6889 5414 12288 HBL1_DMSO_200M_050219_1,12305 HBL1_DMSO_200M_050219_1,12305,IPSPVIFCIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12306 63.125 700.0 85188.0 25 0 4945.6 + 13487 HLVSLIRKLY 10 113 621.389688076455 0 621.3892089724541 PEAK CID FTMS 0 0 0 12288 96172.359375 0.8825269364719303 2 -0.1874847412109375 18 Unmodified _HLVSLIRKLY_ REV__L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|139|1|anti-sense 4.3292370932331545 0.3961065659209837 3 V 1 -1 3.0989 0.0 0.0 0.24976 0.0 0.0 831.5341846472473 307.14179407291255 1138.67597872016 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.24976 + + 44 + 1 1.353 51752.8 1.0 6890 5414 12288 HBL1_DMSO_200M_050219_1,12306 HBL1_DMSO_200M_050219_1,12306,HLVSLIRKLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12308 63.129 27.0 1274400.0 25 0 100900.0 + 42008 VQQKLSSEE 9 76 349.84909630276115 1046.5254595084834 3 349.8490173220634 MULTI CID FTMS 0 0 0 12307 1176497.25 0.3898153582971473 1 -0.0953865051269531 1 Unmodified _VQQKLSSEE_ REV__ENSG00000060237|ENST00000315939|WNK1;REV__nc|ENSG00000060237|Q9H4A3-2|WNK1;REV__nc|ENSG00000060237|Q9H4A3-4|WNK1;REV__nc|ENSG00000060237|Q9H4A3-5|WNK1;REV__nc|ENSG00000060237|Q9H4A3-6|WNK1;REV__nc|ENSG00000060237|Q9H4A3-7|WNK1 7.289230182591677 0.6602208344931196 3 {[QV]|[N{I|L}]|[RA]|[KV]}G{I|L} 4 -1 13.743 0.0 0.0 1.3132 0.0 0.0 0.0 646.2323081354605 646.2323081354605 0.2479108830623424 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}G{I|L} 1.3132 - 96 1 1.341 36939.0 1.0 6891 5415 12307 HBL1_DMSO_200M_050219_1,12308 HBL1_DMSO_200M_050219_1,12308,VQQKLSSEE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12309 63.133 243.0 365180.0 25 0 98498.0 + 31073 RLLDEEISRV 10 65 615.3459800010178 1228.6774070688357 2 615.3461181521416 MULTI CID FTMS 0 0 0 12307 165121.078125 0.1568495392479877 1 -0.0953865051269531 2 Unmodified _RLLDEEISRV_ ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI 12.35033696204008 0.6403153526215293 3 VG 2 10 33.443 0.0 0.0 2.7219 0.0 0.0 0.0 1069.5449923151002 1069.5449923151002 14.397445226949031 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 VG 2.7219 - 94 + 1 1.341 70463.2 1.0 6892 5415 12307 HBL1_DMSO_200M_050219_1,12309 HBL1_DMSO_200M_050219_1,12309,RLLDEEISRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12310 63.135 8.8 2653100.0 25 0 253080.0 + 928 AFIDQSQSL 9 54 504.7529094998892 1007.4912660665784 2 504.7533447146416 MULTI CID FTMS 0 0 0 12307 5009496.5 0.121344157997156 -3 0.1969642639160156 3 Unmodified _AFIDQSQSL_ ENSG00000167325|ENST00000300738|RRM1 13.50788311687929 0.4710407108020397 3 S{I|L} 2 7 14.693 0.0 0.0 1.4583 0.0 0.0 789.3636853554441 0.0 789.3636853554441 0.0 9.208187539523747 0.0 0.0 0 0.0 0.0 0.0 0.0 + S{I|L} 1.4583 + + 15 + 1 1.341 24942.9 1.0 6893 5415 12307 HBL1_DMSO_200M_050219_1,12310 HBL1_DMSO_200M_050219_1,12310,AFIDQSQSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12311 63.136 17.0 1722600.0 25 0 346780.0 + 1159 AGYTDNLVRV 10 48 554.2929864886722 1106.5714200441444 2 554.2935668826103 MULTI CID FTMS 0 0 0 12307 2787969.75 0.8352831098934261 1 -0.0953865051269531 4 Unmodified _AGYTDNLVRV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000509148.1_1_5:180663979-180664048:-|nuORF 10.799506525563784 0.666336781075408 3 [YQ]TDN{I|L}V[RV] 9 2 + 41.884 0.0 0.0 3.785 3.785 80.681 0.0 0.0 0.0 33.78530614985209 7.147642715192504 7.147642715192504 9.208187539523747 0 0.0 0.0 0.0 0.0 [YQ]TDN{I|L}V[RV];[YQ]TDGG{I|L}V[RV] 3.785;2.9529 -;- 42 + 1 1.341 28120.1 1.0 6894 5415 12307 HBL1_DMSO_200M_050219_1,12311 HBL1_DMSO_200M_050219_1,12311,AGYTDNLVRV False True AGYTDNLVRV 63.135856 554.29356688261 25080990.0 12307.0 ENSG00000204628|ENST00000512805|RACK1;;ENST00000509148.1_1_5:180663979-180664048:-|nuORF;;chr5:181237042-181239487|13|13.62|0.8|4.09|-|0|RACK1,RACK1|1 2.206626892089844 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12312 63.137 27.0 2691600.0 25 0 348300.0 + 10877 GAFVHFHGV 9 86 485.7485832578763 969.4826135825526 2 485.7484008669853 MULTI CID FTMS 0 0 0 12307 1509841.625 0.3435176426757371 -2 0.1357688903808593 5 Unmodified _GAFVHFHGV_ ENSG00000006831|ENST00000357103|ADIPOR2 67.41302359171755 0.0220989861905124 3 [AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}HGV 9 0 + 70.856 0.0 0.0 7.3086 7.3086 89.887 0.0 0.0 0.0 7.727562184969372 7.800857501608434 7.727562184969372 7.800857501608434 0 1.372363747448347 1.6989700043360187 0.0 0.0 + + [AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}HGV;[AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}V{[HG]|PP};[AG]{M(Oxidation (M))|F}VH{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PV;[AG]{[DS]|[MA]|[CV]|TT}QHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[AG]{M(Oxidation (M))|F}V[TA][YE]{I|L};[AG]{[DS]|[MA]|[CV]|TT}[AG]HV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}H]|[RQ]}RAQQ[PS];{[DS]|[MA]|[CV]|TT}QQHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[AG]{[DS]|[MA]|[CV]|TT}QH{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[AG][YR][NP]HGV 7.3086;6.504;5.853;4.214;3.648;3.2642;3.2353;3.1018;2.5493;2.34 +;-;-;-;-;-;-;-;-;- + 638 + 1 1.341 62845.0 1.0 6895 5415 12307 HBL1_DMSO_200M_050219_1,12312 HBL1_DMSO_200M_050219_1,12312,GAFVHFHGV True True GAFVHFHGV 63.137036 485.748400866985 96425382.0 12307.0 ENSG00000006831|ENST00000357103|ADIPOR2 10.73221524556478 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12313 63.139 77.0 998220.0 25 0 86845.0 + -1 CSDTYLYEL 9 88 582.2522831893799 1162.4900134455595 2 582.2527343630791 MULTI CID FTMS 0 0 0 12307 1218561.25 1.0 0 0.0 6 Carbamidomethyl (C) _C(Carbamidomethyl (C))SDTYLYEL_ REV__ENSG00000164292|ENST00000379982|RHOBTB3 16.942295170755138 0.3780752226737986 3 [DN]EYSE 6 -1 34.654 0.0 0.0 2.981 0.0 0.0 0.0 422.21689783267817 422.21689783267817 4.648415687162952 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 [DN]EYSE 2.981 - 101 + 1 1.341 61445.9 1.0 6896 5415 12307 HBL1_DMSO_200M_050219_1,12313 HBL1_DMSO_200M_050219_1,12313,CSDTYLYEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12314 63.14 44.0 867330.0 25 0 84020.0 + + 20211 SPLQNISRI 9 81 515.3016273577816 1028.5887017823632 2 515.3032714724541 MULTI CID FTMS 0 0 0 12307 508338.625 0.668366216608881 -1 0.0920982360839843 7 Unmodified _LLASFTPLPA_ ENST00000473515.5_1_6:108067517-108067685:-|nuORF 14.838274106304384 0.5985701837916485 3 [VS]{I|L}QN{I|L} 6 -1 45.891 0.0 0.0 4.4615 0.0 0.0 0.0 371.2059420221313 371.2059420221313 22.421525057367404 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3494850021680094 [VS]{I|L}QN{I|L} 4.4615 - 92 + 1 1.341 35725.8 1.0 6897 5415 12307 HBL1_DMSO_200M_050219_1,12314 HBL1_DMSO_200M_050219_1,12314,LLASFTPLPA False False SPLQNISRI 63.140052 515.303271472454 0.0 12307.0 ENST00000473515.5_1_6:108067517-108067685:-|nuORF 2.265053868293762 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12315 63.148 437.0 433510.0 25 0 42114.0 + 31323 RMISEELVAA 10 169 559.7957417078597 1117.5769304825194 2 559.7958862185478 MULTI CID FTMS 0 0 0 12307 338872.40625 0.4948921752950345 -1 0.0920982360839843 8 Unmodified _RMISEELVAA_ ENSG00000161036|ENST00000292616|LRWD1;ENST00000473880.5_1_7:102106264-102108393:+|nuORF 42.312485326615175 0.1331477410672653 3 {[TV]|[{I|L}S]}S{I|L}SEE{I|L}VAA 11 3 + 67.096 0.0 0.0 6.0037 6.0037 80.744 0.0 0.0 0.0 4.37840343699267 6.653475162440074 4.37840343699267 3.0102999566398125 0 1.0044321917401078 1.3010299956639813 0.9049471895720984 0.0 {[TV]|[{I|L}S]}S{I|L}SEE{I|L}VAA;{[TV]|[{I|L}S]}[KA]C(Carbamidomethyl (C))GE{I|L}VAA;{[VA]|[{I|L}G]}A{M(Oxidation (M))|F}[NG]GE{I|L}VAA;MK{I|L}EGWNVAA;{[TV]|[{I|L}S]}N{I|L}{M(Oxidation (M))|F}VANVAA;{[VA]|[{I|L}G]}[KT]C(Carbamidomethyl (C))GE{I|L}VAA;{[TV]|[{I|L}S]}N{I|L}{M(Oxidation (M))|F}[NG]{I|L}VAA;{[TV]|[{I|L}S]}N{I|L}N{[CT]|[{M(Oxidation (M))|F}G]}{I|L}VAA;{[TV]|[{I|L}S]}S{I|L}SEQNVAA;MGV{I|L}TGWNVAA 6.0037;5.7344;5.6119;5.4084;5.4004;5.3764;5.3137;5.3137;5.3074;5.2725 -;-;-;-;-;-;-;-;-;- 10051 1 1.341 151276.9 1.0 6898 5415 12307 HBL1_DMSO_200M_050219_1,12315 HBL1_DMSO_200M_050219_1,12315,RMISEELVAA False True RMISEELVAA 63.147834 559.795886218548 3565510.5 12307.0 ENST00000473880.5_1_7:102106264-102108393:+|nuORF;;ENSG00000161036|ENST00000292616|LRWD1 5.933696111043294 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12316 63.156 452.0 397930.0 25 0 38795.0 1976 ANGLMGLFEKR 11 144 618.3322335204191 1234.649914107638 2 618.3286620974541 MULTI CID FTMS 0 0 0 12307 315891.75 0.7804674217682348 -1 0.0920982360839843 9 Unmodified _ANGLMGLFEKR_ nc|ENSG00000057608|P50395-2|GDI2 16.149105407346934 0.6992268271266642 3 {[QG]|[NA]}{I|L}GVR{I|L}EDP 10 7 42.271 0.0 0.0 3.4237 0.0 0.0 0.0 167.07549815822645 167.07549815822645 19.823900762527067 0.0 0.0 0.0 0 0.2742275032520141 0.5528419686577808 0.0 0.9386218330464624 {[QG]|[NA]}{I|L}GVR{I|L}EDP 3.4237 - 2392 1 1.341 144221.6 1.0 6899 5415 12307 HBL1_DMSO_200M_050219_1,12316 HBL1_DMSO_200M_050219_1,12316,ANGLMGLFEKR False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12317 63.164 469.0 523910.0 25 0 25397.0 + 38789 TVEFMHYII 9 192 576.7904744694557 0 576.7895995974541 PEAK CID FTMS 0 0 0 12307 277046.8125 0.8574658447450162 3 -0.2123603820800781 10 Unmodified _TVEFMHYII_ ENSG00000100029|ENST00000354694|PES1;nc|ENSG00000100029|O00541-2|PES1 36.04419817259434 0.0811646137502998 3 TTM[NP]{M(Oxidation (M))|F}VE 8 8 44.066 0.0 0.0 3.8266 0.0 0.0 131.09651114609056 98.02544580631093 229.1219569524015 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 2.416386562212267 0.0 TTM[NP]{M(Oxidation (M))|F}VE 3.8266 - 6834 + 1 1.341 184923.3 1.0 6900 5415 12307 HBL1_DMSO_200M_050219_1,12317 HBL1_DMSO_200M_050219_1,12317,TVEFMHYII True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12318 63.175 612.0 404010.0 25 0 62486.0 -1 0 192 428.2423286184989 427.2350521518989 1 428.2435790896416 MULTI CID FTMS 0 0 0 12307 273682.125 0.3210820891555199 -15 1.324542999267578 11 3 {I|L} 1 -1 10.181 0.0 0.0 2.383 0.0 0.0 296.1397895559989 0.0 296.1397895559989 0.0 0.2662275597661256 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.383 - 33 + 1 1.341 192087.3 1.0 6901 5415 12307 HBL1_DMSO_200M_050219_1,12318 HBL1_DMSO_200M_050219_1,12318, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12319 63.183 485.0 365240.0 25 0 46484.0 28344 PSDCEFSFFDP 11 163 645.7543523360055 1289.4941517388108 2 645.7538329958916 MULTI CID FTMS 0 0 0 12307 247145.828125 0.5699785771555723 -2 0.1357688903808593 12 Unmodified _PSDCEFSFFDP_ ENSG00000115295|ENST00000320081|CLIP4;nc|ENSG00000115295|Q8N3C7-2|CLIP4;nc|ENSG00000115295|Q8N3C7-3|CLIP4 12.240655878213236 0.7805268987462184 3 [DP]SPD{[C(Carbamidomethyl (C))G]|[NC]}SPD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 12 7 + 62.322 0.0 0.0 4.8331 4.8331 75.494 0.0 0.0 0.0 2.087241284501438 28.28961781159272 2.087241284501438 2.227856787233911 0 1.110924374808178 1.5228787452803376 0.9943413650139702 0.0 [DP]SPD{[C(Carbamidomethyl (C))G]|[NC]}SPD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[DP]YS{[YC]|[HE]}SPD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[DP]SY{[YC]|[HE]}SPD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]DPS[DP]Y[MT]C;[PS]DPD{[C(Carbamidomethyl (C))G]|[NC]}SPD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[DP]S{[C(Carbamidomethyl (C))G]|[NC]}[DP]SPD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[PS]DY{[YC]|[HE]}SPD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]DPS{[YC]|[HE]}[NG]C(Carbamidomethyl (C)){I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}S{[YC]|[HE]}SPD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[PS]D{[C(Carbamidomethyl (C))G]|[NC]}[DP]SPD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.8331;4.6603;4.6508;4.3855;4.3488;4.2025;4.1665;4.11;3.8076;3.7183 -;-;-;-;-;-;-;-;-;- 2126 1 1.341 131218.3 1.0 6902 5415 12307 HBL1_DMSO_200M_050219_1,12319 HBL1_DMSO_200M_050219_1,12319,PSDCEFSFFDP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12320 63.197 800.0 515110.0 25 0 36535.0 + 11366 GGAQEGAP 8 341 343.65813900609663 0 343.6580078005791 PEAK CID FTMS 0 0 0 12307 157183.65625 0.6688926397735551 -5 0.34112548828125 13 Unmodified _GGAQEGAP_ REV__ENST00000542436.1_1_12:6483977-6484212:-|nuORF 2.889219685676258 0.5898224805723975 3 P 1 -1 3.9794 0.0 0.0 0.58068 0.0 0.0 389.0909488735411 196.1350039117797 585.2259527853208 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.58068 + + 12 + 1 1.341 318380.3 0.8999999761581421 6903 5415 12307 HBL1_DMSO_200M_050219_1,12320 HBL1_DMSO_200M_050219_1,12320,GGAQEGAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12321 63.208 558.0 269830.0 25 0 15649.0 + 33269 AYADFYRNY 9 167 591.763637927931 1181.512722922662 2 592.2655517458916 MULTI CID FTMS 0 0 0 12307 161512.78125 1.0 0 0.0 14 Unmodified _SFPEGRFMPD_ ENSG00000164919|ENST00000520468|COX6C 29.081581746732265 0.3152867722954398 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AD{M(Oxidation (M))|F}AT[HT]W 10 8 + 39.478 0.0 0.0 3.3413 3.3413 68.006 0.0 0.0 0.0 22.043738557067268 2.2979836074083835 2.2979836074083835 0.3393220009542759 0 0.3252574989159953 2.0 0.2614393726401688 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AD{M(Oxidation (M))|F}AT[HT]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}W{M(Oxidation (M))|F}ATHTW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AD{M(Oxidation (M))|F}AV[HC]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AD{M(Oxidation (M))|F}AQ[NP]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PE{[C(Carbamidomethyl (C))E]|[WC]}KA{[QS]|[NT]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}W{M(Oxidation (M))|F}AV[HC]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PE[PG]{M(Oxidation (M))|F}DTW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HA]TA{M(Oxidation (M))|F}DTW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}W{M(Oxidation (M))|F}AQ[NP]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[DP]A{M(Oxidation (M))|F}DTW 3.3413;3.3126;3.1767;2.9539;2.8888;2.8786;2.7354;2.6952;2.6558;2.6401 -;-;-;-;-;-;-;-;-;- 1919 + 1 1.341 113492.5 1.0 6904 5415 12307 HBL1_DMSO_200M_050219_1,12321 HBL1_DMSO_200M_050219_1,12321,SFPEGRFMPD False False AYADFYRNY 63.208248 592.265551745892 1930833.5 12307.0 ENSG00000164919|ENST00000520468|COX6C 1.636813775325815 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12322 63.22 683.0 240700.0 25 0 15439.0 + -1 ANETEMNDETL 11 178 641.7599163489717 0 641.7604247927666 PEAK CID FTMS 0 0 0 12307 139738.34375 1.0 0 0.0 15 Oxidation (M) _ANETEM(Oxidation (M))NDETL_ REV__ENSG00000101216|ENST00000370077|GMEB2 9.38312468134398 0.4559597037863106 3 {I|L}PSG 4 -1 18.175 0.0 0.0 1.4183 0.0 0.0 285.9029216425748 638.3728731744749 924.2757948170496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}PSG 1.4183 - 416 + 1 1.341 128253.2 1.0 6905 5415 12307 HBL1_DMSO_200M_050219_1,12322 HBL1_DMSO_200M_050219_1,12322,ANETEMNDETL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12324 63.224 0.85 49059000.0 25 0 3648400.0 + 22344 LPSPLKQTI 9 70 498.8078646768776 995.6011764205552 2 498.8085204958916 MULTI CID FTMS 0 0 0 12323 71044160.0 0.1475865788901461 -7 0.4864044189453125 1 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 39.94969957227396 0.0757326808254658 3 {I|L}PS[{I|L}P][KQ]T{I|L} 9 0 + 60.869 0.0 0.0 6.1138 6.1138 92.445 0.0 0.0 0.0 33.077053078093215 8.873949984654246 8.873949984654246 60.86873447409921 0 0.8807196863200843 1.6989700043360187 0.6989700043360187 0.0 + + {I|L}PS[{I|L}P][KQ]T{I|L} 6.1138 + + 258 + 1 1.328 38581.9 1.0 6906 5416 12323 HBL1_DMSO_200M_050219_1,12324 HBL1_DMSO_200M_050219_1,12324,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12325 63.225 7.1 3850900.0 25 0 244260.0 + 24889 MPNPSLAQV 9 62 478.7470766031733 955.4796002731466 2 478.7474853396416 MULTI CID FTMS 0 0 0 12323 7698482.0 1.0 0 0.0 2 Unmodified _MPNPSLAQV_ ENSG00000152240|ENST00000282058|HAUS1;nc|ENSG00000152240|Q96CS2-2|HAUS1 22.736283301280096 0.2418982879461534 3 A{I|L}M{[YD]|[{M(Oxidation (M))|F}M]}V 6 8 29.258 0.0 0.0 3.0621 0.0 0.0 245.1387322084966 0.0 245.1387322084966 0.0 22.26789385964942 0.0 0.0 0 0.3054621874040891 0.0 0.3807196863200844 0.0 A{I|L}M{[YD]|[{M(Oxidation (M))|F}M]}V 3.0621 - 92 + 1 1.328 28029.4 1.0 6907 5416 12323 HBL1_DMSO_200M_050219_1,12325 HBL1_DMSO_200M_050219_1,12325,MPNPSLAQV False True MPNPSLAQV 63.225477 478.747485339642 152713312.0 12323.0 nc|ENSG00000152240|Q96CS2-2|HAUS1;;ENSG00000152240|ENST00000282058|HAUS1 6.072716077168782 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12326 63.227 12.0 2872700.0 25 0 159020.0 + 31248 RLTPKLMEV 9 84 543.8200790313753 1085.6256051295504 2 543.8210327029228 MULTI CID FTMS 0 0 0 12323 3027146.75 0.8303261299564717 1 -0.0409584045410156 3 Unmodified _RLTPKLMEV_ ENSG00000147677|ENST00000521861|EIF3H 12.174745833636583 0.5071271664557081 3 V{M(Oxidation (M))|F}M{I|L}[H{I|L}][{I|L}T]{I|L} 9 8 + 32.585 0.0 0.0 3.0015 3.0015 82.55 0.0 0.0 0.0 20.111075038854487 3.657424843733644 3.657424843733644 32.58532514725496 0 0.0 0.0 0.2742275032520141 0.0 V{M(Oxidation (M))|F}M{I|L}[H{I|L}][{I|L}T]{I|L} 3.0015 - 46 + 1 1.328 35390.6 1.0 6908 5416 12323 HBL1_DMSO_200M_050219_1,12326 HBL1_DMSO_200M_050219_1,12326,RLTPKLMEV False True RLTPKLMEV 63.226656 543.821032702923 57031964.0 12323.0 ENSG00000147677|ENST00000521861|EIF3H 3.641521294911703 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12327 63.228 16.0 3065300.0 25 0 168940.0 + 38305 TQIDHYVGI 9 88 523.268995024794 1044.523437116388 2 523.2698242068291 MULTI CID FTMS 0 0 0 12323 2750248.25 0.4785468123568078 -2 0.1874847412109375 4 Unmodified _TQIDHYVGI_ ENSG00000133318|ENST00000377819|RTN3;nc|ENSG00000133318|O95197-2|RTN3;nc|ENSG00000133318|O95197-3|RTN3;nc|ENSG00000133318|O95197-4|RTN3;nc|ENSG00000133318|O95197-7|RTN3 21.53697664764585 0.2571576504437394 3 {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}[QT]YVG{I|L} 9 5 + 24.432 0.0 0.0 2.3391 2.3391 70.865 0.0 0.0 0.0 2.1645371772964985 11.667972997015234 2.1645371772964985 3.0102999566398125 0 0.6069758080123702 0.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}[QT]YVG{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}Y[QT]VG{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}YV[QT]G{I|L};[QT][RD]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VG{I|L};[NP][PG][QT]YVG{I|L};[NP][PG]Y[QT]VG{I|L};[NP][PG]YV[QT]G{I|L};[QA][WE]{[QD]|[EN]|[WG]|[KD]|[RS]}VG{I|L};[AG]T[RD]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VG{I|L};[QA][WE]{I|L}[QT]G{I|L} 2.3391;2.0509;1.7627;1.5416;1.5401;1.2519;0.96368;0.79423;0.76686;0.50604 -;-;-;-;-;-;-;-;-;- 154 1 1.328 40544.4 1.0 6909 5416 12323 HBL1_DMSO_200M_050219_1,12327 HBL1_DMSO_200M_050219_1,12327,TQIDHYVGI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12328 63.229 11.0 1830900.0 25 0 181390.0 + 39890 VFMHVSTAY 9 48 527.7546397335034 1053.494726533807 2 527.7534667849541 MULTI CID FTMS 0 0 0 12323 2858144.75 0.2952579765977033 3 -0.2215576171875 5 Unmodified _VFMHVSTAY_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 9.347437153973935 0.588369872918737 3 VVYAY 5 5 33.188 0.0 0.0 3.1502 0.0 0.0 440.1899302465004 0.0 440.1899302465004 0.0 22.59165558764808 0.0 0.0 0 0.0 0.0 0.0 0.0 VVYAY 3.1502 - 17 + 1 1.328 25352.4 1.0 6910 5416 12323 HBL1_DMSO_200M_050219_1,12328 HBL1_DMSO_200M_050219_1,12328,VFMHVSTAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12329 63.23 18.0 2027500.0 25 0 225020.0 + 3405 AYVHMVTHF 9 68 368.8480161269438 1103.5222189810313 3 368.8480712771416 MULTI CID FTMS 0 0 0 12323 2405480.75 0.0489741338359878 5 -0.3686943054199219 6 Unmodified _AYVHMVTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 10.823927491677226 0.5436922275383211 3 [HV]MT 4 5 23.46 0.0 0.0 2.1259 0.0 0.0 0.0 632.2841131401428 632.2841131401428 4.586294715930773 0.0 0.0 0.0 0 0.0 1.154901959985743 0.3494850021680094 0.0 [HV]MT 2.1259 - 41 1 1.328 37633.1 1.0 6911 5416 12323 HBL1_DMSO_200M_050219_1,12329 HBL1_DMSO_200M_050219_1,12329,AYVHMVTHF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12330 63.231 24.0 596890.0 25 0 60316.0 + -1 ARPRTVSA 8 38 450.2566302429895 898.498707552779 2 450.2567321658134 MULTI CID FTMS 0 0 0 12323 2203873.25 1.0 0 0.0 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ARPRTVSA_ REV__ENST00000461307.5_1_22:18347595-18347679:-|nuORF 0.6903765706972694 0.8201419426409876 3 T 1 -1 2.4743 0.0 0.0 0.27538 0.0 0.0 601.570162486176 192.85506616763908 794.425228653815 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.27538 + + 1 + 1 1.328 16940.2 1.0 6912 5416 12323 HBL1_DMSO_200M_050219_1,12330 HBL1_DMSO_200M_050219_1,12330,ARPRTVSA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12331 63.233 29.0 913370.0 25 0 132090.0 + 33856 RVFGSQNLTTV 11 42 611.8249246950053 1221.6352964568105 2 611.8251830935478 MULTI CID FTMS 0 0 0 12323 1982760.5 0.7337584070449316 1 -0.0409584045410156 8 Unmodified _SLEVHLSTHTV_ ENSG00000149428|ENST00000617285|HYOU1;ENST00000543287.5_1_11:118919950-118926831:-|nuORF;nc|ENSG00000149428|Q9Y4L1-2|HYOU1 17.11289562659939 0.6791789249425932 3 D{I|L}TTV 5 7 33.456 0.0 0.0 2.7386 0.0 0.0 674.351366111525 0.0 674.351366111525 0.0 20.066212630749824 0.0 0.0 0 0.6989700043360187 0.0 0.4247425010840047 0.0 D{I|L}TTV 2.7386 - 37 1 1.328 29400.4 1.0 6913 5416 12323 HBL1_DMSO_200M_050219_1,12331 HBL1_DMSO_200M_050219_1,12331,SLEVHLSTHTV False False RVFGSQNLTTV 63.23255 611.825183093548 0.0 12323.0 ENSG00000149428|ENST00000617285|HYOU1;;ENST00000543287.5_1_11:118919950-118926831:-|nuORF;;nc|ENSG00000149428|Q9Y4L1-2|HYOU1 3.138399044672648 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12332 63.234 36.0 1402600.0 25 0 142890.0 + 3762 DAHIYLNHI 9 87 365.8579892021616 1094.5521382066847 3 365.8575622439384 MULTI CID FTMS 0 0 0 12323 1727545.0 0.0462110049464148 5 -0.3686943054199219 9 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 19.361941925380144 0.3125782356748823 3 [HA]D{I|L}Y 5 6 33.276 0.0 0.0 3.0402 0.0 0.0 0.0 492.25828990029726 492.25828990029726 11.30001899740286 0.0 0.0 0.0 0 0.5 0.7958800173440752 0.2614393726401688 0.0 [HA]D{I|L}Y 3.0402 - 134 1 1.328 46344.0 1.0 6914 5416 12323 HBL1_DMSO_200M_050219_1,12332 HBL1_DMSO_200M_050219_1,12332,DAHIYLNHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12333 63.235 24.0 1065500.0 25 0 161690.0 + 33439 SIAPRMMSV 9 55 496.2570585144604 990.4995640957208 2 496.2578918337822 MULTI CID FTMS 0 0 0 12323 1488002.5 1.0 0 0.0 10 Unmodified _SIAPRMMSV_ ENSG00000047315|ENST00000314595|POLR2B 13.90604991867851 0.4602628045680013 3 {[TV]|[{I|L}S]}A 3 6 34.705 0.0 0.0 3.5038 0.0 0.0 0.0 716.3216098104975 716.3216098104975 22.23074980804633 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[TV]|[{I|L}S]}A 3.5038 + + 14 + 1 1.328 27264.2 1.0 6915 5416 12323 HBL1_DMSO_200M_050219_1,12333 HBL1_DMSO_200M_050219_1,12333,SIAPRMMSV False True SIAPRMMSV 63.234908 496.257891833782 9152752.0 12323.0 ENSG00000047315|ENST00000314595|POLR2B 4.769411087036133 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12334 63.236 35.0 880020.0 25 0 95188.0 + 43065 VYIEHRLMM 9 57 397.8716946178959 1190.5932544538875 3 397.8719360232353 MULTI CID FTMS 0 0 0 12323 1460285.375 0.3166861701441302 3 -0.2215576171875 11 Unmodified _VYIEHRLMM_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-2|MCM7 22.736283301280096 0.2418982879461534 3 VY{I|L}EH 5 4 53.32 0.0 0.0 4.4785 0.0 0.0 0.0 546.2536715143186 546.2536715143186 40.18666787442852 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 0.0 0.0 + VY{I|L}EH 4.4785 + + 49 + 1 1.328 32694.2 1.0 6916 5416 12323 HBL1_DMSO_200M_050219_1,12334 HBL1_DMSO_200M_050219_1,12334,VYIEHRLMM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12335 63.237 47.0 1001400.0 25 0 154920.0 + 3765 DAHIYLNHI 9 82 548.282804762219 1094.551056591238 2 548.2833740115166 MULTI CID FTMS 0 0 0 12323 1314283.625 0.0395761300898027 5 -0.3686943054199219 12 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 59.36838082759317 0.0264317782606298 3 [H{I|L}]DAY{I|L}N[H{I|L}] 9 4 + 60.301 0.0 0.0 5.5092 5.5092 83.168 0.0 0.0 0.0 6.4215905896025305 7.147642715192504 6.4215905896025305 6.4215905896025305 0 1.6989700043360187 1.6989700043360187 0.0 0.0 [H{I|L}]DAY{I|L}N[H{I|L}];[HA]D{I|L}Y{I|L}N[H{I|L}];[H{I|L}]DAY{I|L}GG[H{I|L}];[HA]D{I|L}Y{I|L}GG[H{I|L}];[H{I|L}]D[Y{I|L}]AN[H{I|L}];[H{I|L}]D[Y{I|L}]AGG[H{I|L}];[WH]{I|L}[RH][{M(Oxidation (M))|F}T]V;[H{I|L}][YN]{I|L}{[DA]|[EG]}[H{I|L}] 5.5092;4.9225;4.6679;4.0812;3.7997;2.9584;2.1888;1.6518 -;-;-;-;-;-;-;- 241 1 1.328 39950.8 1.0 6917 5416 12323 HBL1_DMSO_200M_050219_1,12335 HBL1_DMSO_200M_050219_1,12335,DAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12336 63.239 33.0 1105600.0 25 0 113850.0 41380 VPKTPVEI 8 70 441.7680744852922 881.5215960373844 2 441.7682678103447 MULTI CID FTMS 0 0 0 12323 1114650.375 0.595523358416159 24 -1.4580726623535156 13 Unmodified _VPKTPVEI_ ENST00000529587.1_1_11:9806704-9806878:-|nuORF 15.847184025352805 0.6768015514314958 3 VP 2 6 42.206 0.0 0.0 4.7879 0.0 0.0 0.0 682.3794039361936 682.3794039361936 29.44201534099189 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + VP 4.7879 + + 39 + 1 1.328 38072.4 1.0 6918 5416 12323 HBL1_DMSO_200M_050219_1,12336 HBL1_DMSO_200M_050219_1,12336,VPKTPVEI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12337 63.24 41.0 433820.0 25 0 48328.0 -1 0 35 603.9675200152114 1808.8807306458343 3 603.9731933474541 MULTI CID FTMS 0 0 0 12323 1055913.25 0.2307366336845691 -7 0.4864044189453125 14 3 {I|L}Q 2 -1 22.831 0.0 0.0 1.2622 0.0 0.0 1549.7268132647778 0.0 1549.7268132647778 0.0 12.373343961715548 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}Q 1.2622 - 11 + 1 1.328 24138.2 1.0 6919 5416 12323 HBL1_DMSO_200M_050219_1,12337 HBL1_DMSO_200M_050219_1,12337, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12338 63.242 84.0 450660.0 25 0 42092.0 + 13823 HTPQNLITV 9 77 511.7843405082491 1021.5541280832982 2 511.7848998904228 MULTI CID FTMS 0 0 0 12323 563926.3125 0.4810512791750087 4 -0.3042259216308594 15 Unmodified _HTPQNLITV_ ENSG00000213928|ENST00000396864|IRF9;ENST00000557894.5_1_14:24634074-24635402:+|nuORF;ENST00000560311.1_1_14:24634973-24635402:+|nuORF;ENST00000561415.1_1_14:24633725-24635402:+|nuORF 22.736283301280096 0.2418982879461534 3 T[MN]N{I|L}KKG 8 6 20.52 0.0 0.0 2.0088 0.0 0.0 117.07944686103671 0.0 117.07944686103671 0.0 9.261408983840376 0.0 0.0 0 0.0 0.0 0.75 0.0 T[MN]N{I|L}KKG 2.0088 - 129 1 1.328 35503.8 1.0 6920 5416 12323 HBL1_DMSO_200M_050219_1,12338 HBL1_DMSO_200M_050219_1,12338,HTPQNLITV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12339 63.244 137.0 258260.0 25 0 16021.0 + 43067 VYIEHRLMM 9 60 596.3033335439259 1190.5921141546517 2 596.3032104372978 MULTI CID FTMS 0 0 0 12323 570723.8125 0.3309721429871062 3 -0.2215576171875 16 Unmodified _VYIEHRLMM_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-2|MCM7 24.020572477871973 0.2255576514309169 3 VY{I|L}ER 5 4 64.949 0.0 0.0 5.4551 0.0 0.0 0.0 527.2251070611936 527.2251070611936 51.45365019512085 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 VY{I|L}ER 5.4551 - 61 + 1 1.328 32186.0 1.0 6921 5416 12323 HBL1_DMSO_200M_050219_1,12339 HBL1_DMSO_200M_050219_1,12339,VYIEHRLMM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12340 63.247 131.0 495390.0 25 0 99377.0 + 36414 SYVVGHVL 8 75 437.244698414187 872.474843895174 2 437.2451049685478 MULTI CID FTMS 0 0 0 12323 484639.96875 0.5416317097759549 -1 0.0953865051269531 17 Unmodified _SYVVGHVL_ ENSG00000163611|ENST00000295872|SPICE1;ENST00000496105.1_1_3:113169108-113212968:-|nuORF 28.17323086031832 0.4514957916281387 3 GVV[MT] 5 6 20.247 0.0 0.0 2.3207 0.0 0.0 367.2227650373063 0.0 367.2227650373063 0.0 1.0391719390811716 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 GVV[MT] 2.3207 - 86 1 1.328 55281.9 1.0 6922 5416 12323 HBL1_DMSO_200M_050219_1,12340 HBL1_DMSO_200M_050219_1,12340,SYVVGHVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12341 63.25 116.0 611050.0 25 0 96343.0 + -1 MDTPLPPPGRT 11 80 599.2981943660944 1196.5818357989888 2 599.3002197146416 MULTI CID FTMS 0 0 0 12323 416535.25 0.1903651616904366 -4 0.2923507690429687 18 Oxidation (M) _M(Oxidation (M))DTPLPPPGRT_ REV__ENSG00000164077|ENST00000296473|MON1A;REV__nc|ENSG00000164077|Q86VX9|MON1A 11.494710602746466 0.7960433852372589 3 [C(Carbamidomethyl (C))H]YS{M(Oxidation (M))|F}SRK{I|L} 9 -1 + 61.169 0.0 0.0 5.112 5.112 82.18 0.0 0.0 0.0 29.02880645020624 11.828118007873767 11.828118007873767 6.817496819840656 0 1.9291746928241125 0.0 0.3807196863200844 0.4247425010840047 [C(Carbamidomethyl (C))H]YS{M(Oxidation (M))|F}SRK{I|L};[C(Carbamidomethyl (C))H]YHPSRK{I|L} 5.112;4.5422 -;- 171 + 1 1.328 58783.3 1.0 6923 5416 12323 HBL1_DMSO_200M_050219_1,12341 HBL1_DMSO_200M_050219_1,12341,MDTPLPPPGRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12342 63.257 413.0 302060.0 25 0 28337.0 + 30958 KVIDSSDVVVQV 12 124 644.3617780820099 1286.7090032308197 2 644.3624145388603 MULTI CID FTMS 0 0 0 12323 416827.625 1.0 0 0.0 19 Unmodified _RKTSHSFVVNI_ ENSG00000134697|ENST00000373062|GNL2 28.49450938151212 0.4231428536161201 3 {NN|[MP]|[D{I|L}]|[EV]}VKSSDVVVQV 12 9 + 69.896 0.0 0.0 5.4322 5.4322 83.381 0.0 0.0 0.0 6.856734291156954 9.634928107446193 6.856734291156954 6.856734291156954 0 1.0994850021680094 0.8239087409443188 1.416386562212267 0.0 {NN|[MP]|[D{I|L}]|[EV]}VKSSDVVVQV;VVEKSSDVVVQV;{NN|[MP]|[D{I|L}]|[EV]}VK{[C(Carbamidomethyl (C))E]|[WC]}VVVQV;{NN|[MP]|[D{I|L}]|[EV]}VKV[CS]VVVQV;VVKESSDVVVQV;{NN|[MP]|[D{I|L}]|[EV]}V{[C(Carbamidomethyl (C))E]|[WC]}KVVVQV;{NN|[MP]|[D{I|L}]|[EV]}V[C(Carbamidomethyl (C))R]TVVVQV;{NN|[MP]|[D{I|L}]|[EV]}V{[C(Carbamidomethyl (C))E]|[WC]}VKVVQV;VVEK{[C(Carbamidomethyl (C))E]|[WC]}VVVQV;VVEKV[CS]VVVQV 5.4322;4.8993;4.8074;4.7781;4.59;4.5735;4.4011;4.398;4.2746;4.2452 -;-;-;-;-;-;-;-;-;- 2093 1 1.328 97559.1 1.0 6924 5416 12323 HBL1_DMSO_200M_050219_1,12342 HBL1_DMSO_200M_050219_1,12342,RKTSHSFVVNI False True KVIDSSDVVVQV 63.256914 644.36241453886 3053720.75 12323.0 ENSG00000134697|ENST00000373062|GNL2 7.638268788655599 2.0 False 12.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12343 63.261 224.0 514160.0 25 0 41658.0 + 4540 DAYPNGLQV 9 150 488.740557401362 975.466561869524 2 488.7411682009697 MULTI CID FTMS 0 0 0 12323 392630.65625 0.0605507601218168 5 -0.3686943054199219 20 Unmodified _DAYPNGLQV_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 20.453626601364224 0.2830276176381075 3 EPN{M(Oxidation (M))|F} 4 7 23.193 0.0 0.0 2.3776 0.0 0.0 0.0 485.27536951236567 485.27536951236567 5.868442180037423 0.0 0.0 0.0 0 0.1421590589602531 0.0 0.0 0.0 EPN{M(Oxidation (M))|F} 2.3776 - 995 + 1 1.328 91174.6 1.0 6925 5416 12323 HBL1_DMSO_200M_050219_1,12343 HBL1_DMSO_200M_050219_1,12343,DAYPNGLQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12345 63.265 50.0 688480.0 25 0 84850.0 + 28162 PPRSPRGG 8 62 412.23031496903735 822.4460770048747 2 412.2303039431572 MULTI CID FTMS 0 0 0 12344 1160622.125 0.8312559641755993 1 -0.0760154724121093 1 Unmodified _PPRSPRGG_ REV__ENSG00000121335|ENST00000389362|PRB2;REV__ENSG00000251655|ENST00000500254|PRB1;REV__nc|ENSG00000251655|P04280|PRB1 0.7936320650641473 0.8195151834710337 3 E 1 -1 1.9897 0.0 0.0 0.24192 0.0 0.0 411.2440944382716 279.1458834283813 690.3899778666529 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.24192 - 3 + 1 1.328 31440.2 1.0 6926 5417 12344 HBL1_DMSO_200M_050219_1,12345 HBL1_DMSO_200M_050219_1,12345,PPRSPRGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12346 63.266 17.0 1651900.0 25 0 164260.0 + 9596 FLKWMHAP 8 61 515.268868320864 1028.523183708528 2 515.7704955935478 MULTI CID FTMS 0 0 0 12344 698295.0625 0.8912884884820044 1 -0.0760154724121093 2 Unmodified _FLKWMHAP_ REV__ENST00000523063.5_1_8:33653913-33865452:+|nuORF 6.354104778181461 0.7857632046190106 3 [VS]H 3 -1 14.437 0.0 0.0 1.4037 0.0 0.0 0.0 702.3400836931561 702.3400836931561 3.177915127358128 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [VS]H 1.4037 - 42 1 1.328 28204.9 1.0 6927 5417 12344 HBL1_DMSO_200M_050219_1,12346 HBL1_DMSO_200M_050219_1,12346,FLKWMHAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12347 63.268 8.6 4904500.0 25 0 398090.0 + 5022 DGWDRTPQI 9 91 544.2616488323611 1086.508744731522 2 544.2624389529228 MULTI CID FTMS 0 0 0 12344 4008729.0 0.327094989616949 -3 0.2284431457519531 3 Unmodified _DGWDRTPQI_ ENSG00000100330|ENST00000401950|MTMR3;ENSG00000108389|ENST00000682306|MTMR4;nc|ENSG00000100330|Q13615-2|MTMR3;nc|ENSG00000100330|Q13615-3|MTMR3;nc|ENSG00000108389|Q9NYA4|MTMR4 49.55428908609986 0.0413471690215031 3 {NN|[MP]|[D{I|L}]|[EV]}KKED 6 8 37.937 0.0 0.0 3.4916 0.0 0.0 0.0 355.1040879681863 355.1040879681863 18.74220950028501 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.7302046884880937 {NN|[MP]|[D{I|L}]|[EV]}KKED 3.4916 - 88 1 1.328 39635.3 1.0 6928 5417 12344 HBL1_DMSO_200M_050219_1,12347 HBL1_DMSO_200M_050219_1,12347,DGWDRTPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12348 63.269 29.0 873570.0 25 0 80858.0 + 3408 AYVHMVTHF 9 56 552.7677589148686 1103.5209648965372 2 552.7676269412041 MULTI CID FTMS 0 0 0 12344 1480243.125 0.0540118217202056 6 -0.4337158203125 4 Unmodified _AYVHMVTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 42.09456458481378 0.0639583784996157 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHY[PA]{[{M(Oxidation (M))|F}H]|[RQ]} 9 3 + 37.125 0.0 0.0 3.3643 3.3643 83.467 0.0 0.0 0.0 4.2327121632892855 12.063631030611582 4.2327121632892855 37.12529970598021 0 0.8935078169319297 2.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHY[PA]{[{M(Oxidation (M))|F}H]|[RQ]} 3.3643 - 79 1 1.328 25402.2 1.0 6929 5417 12344 HBL1_DMSO_200M_050219_1,12348 HBL1_DMSO_200M_050219_1,12348,AYVHMVTHF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12349 63.271 115.0 473440.0 25 0 33560.0 41646 VPPRCLGV 8 92 420.7434468991572 839.4723408651143 2 420.7435790896416 MULTI CID FTMS 0 0 0 12344 581655.9375 0.8759633696234207 2 -0.1805992126464843 5 Unmodified _VPPRCLGV_ ENST00000454558.2_2_2:97203122-97203740:+|nuORF 2.889219685676258 0.8067950007271085 3 {I|L} 1 7 10.278 0.0 0.0 1.2243 0.0 0.0 708.3772766334722 0.0 708.3772766334722 0.0 -11.694810743563496 -11.694810743563496 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2243 + + 40 + 1 1.328 47220.6 1.0 6930 5417 12344 HBL1_DMSO_200M_050219_1,12349 HBL1_DMSO_200M_050219_1,12349,VPPRCLGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12350 63.279 443.0 455040.0 25 0 45931.0 + 5898 DPYKVYRIV 9 166 384.8851539653815 0 384.8852416872978 PEAK CID FTMS 0 0 0 12344 452934.21875 1.0 0 0.0 6 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 46.020951573049366 0.0425517664003206 3 VY 2 7 8.5835 0.0 0.0 1.118 0.0 0.0 119.35893077373936 383.2417337537429 502.6006645274822 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + VY 1.118 + + 22 + 1 1.328 165542.0 1.0 6931 5417 12344 HBL1_DMSO_200M_050219_1,12350 HBL1_DMSO_200M_050219_1,12350,DPYKVYRIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12351 63.287 450.0 438740.0 25 0 57142.0 + 14082 IAPPSHLI 8 187 424.2554127473976 846.4962725615952 2 424.2553588747978 MULTI CID FTMS 0 0 0 12344 395074.125 1.0 0 0.0 7 Unmodified _IAPPSHLI_ ENSG00000073282|ENST00000264731|TP63;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;nc|ENSG00000073282|Q9H3D4-10|TP63;nc|ENSG00000073282|Q9H3D4-11|TP63;nc|ENSG00000073282|Q9H3D4-12|TP63;nc|ENSG00000073282|Q9H3D4-2|TP63;nc|ENSG00000073282|Q9H3D4-3|TP63;nc|ENSG00000073282|Q9H3D4-4|TP63;nc|ENSG00000073282|Q9H3D4-5|TP63;nc|ENSG00000073282|Q9H3D4-6|TP63;nc|ENSG00000073282|Q9H3D4-7|TP63;nc|ENSG00000073282|Q9H3D4-8|TP63;nc|ENSG00000073282|Q9H3D4-9|TP63 42.96799951952854 0.1846367511955703 3 [{I|L}A]PPSH{I|L}{I|L} 8 0 + 49.404 0.0 0.0 5.8362 5.8362 82.943 0.0 0.0 0.0 23.4176003468815 12.184290373512034 12.184290373512034 4.961987796517704 0 0.4247425010840047 2.0 0.3252574989159953 0.0 + + [{I|L}A]PPSH{I|L}{I|L};[{I|L}A]{I|L}[HS]PP{I|L};[{I|L}A]{I|L}[HS]P{I|L}P 5.8362;5.2501;4.1741 +;-;- + 296 + 1 1.328 153446.0 1.0 6932 5417 12344 HBL1_DMSO_200M_050219_1,12351 HBL1_DMSO_200M_050219_1,12351,IAPPSHLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12352 63.296 530.0 814540.0 25 0 68914.0 + 44589 YPFKPPKI 8 304 330.5321852651292 988.5747263955876 3 330.5320617556572 MULTI CID FTMS 0 0 0 12344 383852.9375 0.0219442871199768 -35 2.8765411376953125 8 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 41.845 0.0 0.0 4.2329 4.2329 78.692 0.0 0.0 0.0 16.26155449805701 2.1593575513029606 2.1593575513029606 6.197887582883936 0 0.0 0.7958800173440752 0.0 0.3054621874040891 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L};YP{M(Oxidation (M))|F}KP{I|L}KP;YP{M(Oxidation (M))|F}K{I|L}PKP;YP{M(Oxidation (M))|F}K{I|L}KPP;Y{I|L}MKP{I|L}KP;Y{I|L}MK{I|L}PKP;YP{M(Oxidation (M))|F}{I|L}KPKP;Y{I|L}MK{I|L}KPP;YP{M(Oxidation (M))|F}{I|L}KKPP 4.2329;3.6059;3.1174;3.0194;2.5925;2.4905;2.3925;2.2323;1.9655;1.8053 +;-;-;-;-;-;-;-;-;- + 309 + 1 1.328 339398.9 1.0 6933 5417 12344 HBL1_DMSO_200M_050219_1,12352 HBL1_DMSO_200M_050219_1,12352,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12353 63.303 380.0 594040.0 25 0 36332.0 + 38383 TQYHEVMNL 9 201 567.7671030059897 1133.5196530787794 2 567.7666503787041 MULTI CID FTMS 0 0 0 12344 307691.71875 0.8701969582411055 -1 0.0409584045410156 9 Unmodified _TQYHEVMNL_ ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10 43.9818466556824 0.0535980856389242 3 {NN|[MP]|[D{I|L}]|[EV]}[WD]EVMN{I|L} 9 4 + 62.321 0.0 0.0 5.498 5.498 75.886 0.0 0.0 0.0 6.280673999630864 11.55210580613776 6.280673999630864 1.0771841425634676 0 0.9361818737241736 0.9208187539523752 1.2416440611282626 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}[WD]EVMN{I|L};{NN|[MP]|[D{I|L}]|[EV]}HYQTMN{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[CP]|[EA]}TEVMN{I|L};{[WN]|[YH]}QTEVMN{I|L};[QT]YHEVMN{I|L};[AG]TYHEVMN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WD]EVMGG{I|L};[{I|L}P]CDTEVMN{I|L};{NN|[MP]|[D{I|L}]|[EV]}HY[AG]TMN{I|L};{NN|[MP]|[D{I|L}]|[EV]}HYQTMGG{I|L} 5.498;5.403;5.3287;4.9439;4.8807;4.8149;4.6857;4.6505;4.5906;4.5906 -;-;-;-;+;-;-;-;-;- + 8278 1 1.328 168428.1 1.0 6934 5417 12344 HBL1_DMSO_200M_050219_1,12353 HBL1_DMSO_200M_050219_1,12353,TQYHEVMNL True True TQYHEVMNL 63.303191 567.766650378704 3177379.0 12344.0 ENSG00000086827|ENST00000200135|ZW10;;nc|ENSG00000086827|O43264-2|ZW10 5.777450243631999 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12354 63.31 394.0 272280.0 25 0 32391.0 + 3423 AYYEFREEAY 10 114 670.792810852883 1339.571068772566 2 670.7922851443291 MULTI CID FTMS 0 0 0 12344 297487.90625 1.0 0 0.0 10 Unmodified _AYYEFREEAY_ ENSG00000214753|ENST00000301785|HNRNPUL2 57.24910588100465 0.0438022649904578 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[TP]A{M(Oxidation (M))|F}[C(Carbamidomethyl (C))N]AY 11 6 + 66.603 0.0 0.0 4.972 4.972 55.525 0.0 0.0 0.0 19.815312897084667 6.109243748081774 6.109243748081774 0.0 0 2.110924374808178 2.0 0.3054621874040891 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[TP]A{M(Oxidation (M))|F}[C(Carbamidomethyl (C))N]AY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[TP]A{M(Oxidation (M))|F}HHAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[TP]AEEYAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[TP]A{M(Oxidation (M))|F}EY{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YE{M(Oxidation (M))|F}REEAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[TP]EEAYAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[TP]A{M(Oxidation (M))|F}EC[{M(Oxidation (M))|F}E];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[TP]AYEEAY;[YE][PS]REYYAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[TP]AE{M(Oxidation (M))|F}Y{[ES]|[DT]|[{I|L}C]} 4.972;4.972;4.8525;4.5159;4.2127;4.1269;4.1227;3.9613;3.4928;3.4461 -;-;-;-;+;-;-;-;-;- + 1468 1 1.328 82324.9 1.0 6935 5417 12344 HBL1_DMSO_200M_050219_1,12354 HBL1_DMSO_200M_050219_1,12354,AYYEFREEAY True True AYYEFREEAY 63.310266 670.792285144329 2357040.0 12344.0 ENSG00000214753|ENST00000301785|HNRNPUL2 7.457930088043213 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12355 63.318 421.0 275450.0 25 0 18437.0 + 39362 VAGPSFETV 9 111 906.454662211319 905.447385744719 1 906.4540893435478 MULTI CID FTMS 0 0 0 -1 0 11 Unmodified _VAGPSFETV_ ENSG00000198805|ENST00000361505|PNP;ENST00000554056.5_1_14:20942916-20944757:+|nuORF;ENST00000556754.1_1_14:20943209-20944757:+|nuORF 71.13359017698441 0.0206607516130725 3 [NP]T{M(Oxidation (M))|F}VETV 8 5 + 45.597 0.0 0.0 5.0359 5.0359 76.318 0.0 0.0 0.0 1.7827366175690642 24.852004652824213 1.7827366175690642 2.329022044314464 0 0.25 0.0 1.7416440611282626 0.0 [NP]T{M(Oxidation (M))|F}VETV;[NP]TV{M(Oxidation (M))|F}ETV;{[VA]|[{I|L}G]}GPS{M(Oxidation (M))|F}ETV;{[QV]|[N{I|L}]|[RA]|[KV]}PS{M(Oxidation (M))|F}ETV;[NP]{I|L}S{M(Oxidation (M))|F}ETV;[NP]T{M(Oxidation (M))|F}EVTV;[H{I|L}]HHYTV;[{I|L}P]NS{M(Oxidation (M))|F}ETV;[NP]T{M(Oxidation (M))|F}VTEV;V{M(Oxidation (M))|F}TV{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 5.0359;4.7787;4.4666;4.4292;4.1088;4.0749;4.0547;4.0287;4.0117;3.8546 -;-;+;-;-;-;-;-;-;- + 1466 1 1.328 84413.8 1.0 6936 5417 12344 HBL1_DMSO_200M_050219_1,12355 HBL1_DMSO_200M_050219_1,12355,VAGPSFETV True True VAGPSFETV 63.317793 906.454089343548 16518817.0 12344.0 ENSG00000198805|ENST00000361505|PNP;;ENST00000554056.5_1_14:20942916-20944757:+|nuORF;;ENST00000556754.1_1_14:20943209-20944757:+|nuORF 7.287280877431233 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12356 63.325 411.0 261210.0 25 0 36025.0 + 19338 LEMYAYMSY 9 145 585.7438935614668 1169.4732341897336 2 585.7451660037041 MULTI CID FTMS 0 0 0 12344 241658.484375 1.0 0 0.0 12 Unmodified _LEMYAYMSY_ REV__ENST00000392882.6_1_14:100800764-100801076:-|nuORF 7.910154910731844 0.6385446671287552 3 YY[SG][{M(Oxidation (M))|F}T]RNY 9 -1 YY[SG][{M(Oxidation (M))|F}T]RN + + 13.495 -3.3344 -0.33735 1.1539 1.1539 48.398 0.0 0.0 0.0 0.0 -1.1978875828839364 -1.1978875828839364 0.0 0 0.0 0.0 0.0 0.0 YY[SG][{M(Oxidation (M))|F}T]RNY 1.1539 - 424 + 1 1.328 81383.7 1.0 6937 5417 12344 HBL1_DMSO_200M_050219_1,12356 HBL1_DMSO_200M_050219_1,12356,LEMYAYMSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12357 63.337 620.0 372640.0 25 0 40400.0 42215 VSGTKGSK 8 236 382.21990709755727 762.4252612619146 2 382.2198058962822 MULTI CID FTMS 0 0 0 12344 235331.046875 0.0355272499233464 -6 0.3822097778320312 13 Unmodified _VSGTKGSK_ ENST00000303538.12_1_4:39824880-39824973:-|nuORF 0.7936320650641473 0.8195151834710337 3 H 1 8 7.0336 0.0 0.0 0.92253 0.0 0.0 607.3575407802724 0.0 607.3575407802724 0.0 0.1290363180314262 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.92253 - 34 + 1 1.328 179968.2 1.0 6938 5417 12344 HBL1_DMSO_200M_050219_1,12357 HBL1_DMSO_200M_050219_1,12357,VSGTKGSK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12359 63.341 22.0 3903400.0 25 0 475400.0 -1 0 107 434.24358628486095 433.23630981826096 1 434.2434265017509 MULTI CID FTMS 0 0 0 12358 2884561.75 0.6770681265706523 2 -0.1872520446777343 1 3 {[QS]|[NT]}S 3 -1 30.391 0.0 0.0 7.0149 0.0 0.0 0.0 128.0904717657797 128.0904717657797 19.67777656037148 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.555462187404089 0.6139829889124311 {[QS]|[NT]}S 7.0149 - 14 1 1.326 71083.2 1.0 6939 5418 12358 HBL1_DMSO_200M_050219_1,12359 HBL1_DMSO_200M_050219_1,12359, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12360 63.342 40.0 1381100.0 25 0 176330.0 + 41618 VPPPLAKAI 9 72 453.29442015475456 904.5742873763091 2 453.2946349978447 MULTI CID FTMS 0 0 0 12358 1352435.5 0.4928478086267238 1 -0.104583740234375 2 Unmodified _VPPPLAKAI_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;ENST00000588913.5_1_19:10244345-10246231:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 28.486842064014134 0.1687311288560894 3 VPP 3 6 50.445 0.0 0.0 5.5767 0.0 0.0 0.0 608.3787785073442 608.3787785073442 38.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VPP 5.5767 + + 122 + 1 1.326 51050.8 1.0 6940 5418 12358 HBL1_DMSO_200M_050219_1,12360 HBL1_DMSO_200M_050219_1,12360,VPPPLAKAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12361 63.344 19.0 2583600.0 25 0 321180.0 + 27717 PLLNRMSV 8 65 465.26459364999903 928.514634366798 2 465.2656432986259 MULTI CID FTMS 0 0 0 12358 2376658.75 0.7894725478138361 -2 0.116973876953125 3 Unmodified _PLLNRMSV_ REV__ENST00000420708.1_1_22:21496493-21496589:-|nuORF 30.22481116460888 0.4082965392918993 3 KSMV 4 -1 34.909 0.0 0.0 3.7597 0.0 0.0 465.2611256330094 0.0 465.2611256330094 0.0 1.154017961346412 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 KSMV 3.7597 - 50 1 1.326 47528.0 1.0 6941 5418 12358 HBL1_DMSO_200M_050219_1,12361 HBL1_DMSO_200M_050219_1,12361,PLLNRMSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12362 63.345 20.0 922770.0 25 0 118170.0 8921 FALEMQMY 8 40 516.7316299509131 1031.448706968626 2 516.7324706912041 MULTI CID FTMS 0 0 0 12358 1701676.625 0.8301405226171519 -1 0.0760154724121093 4 Unmodified _FALEMQMY_ ENST00000480273.5_1_20:62318929-62319157:+|nuORF 5.760428011301431 0.7893668129297577 3 A 1 7 3.9794 0.0 0.0 0.38581 0.0 0.0 841.337544714523 116.0513170831664 957.3888617976894 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.38581 + + 5 + 1 1.326 21278.7 1.0 6942 5418 12358 HBL1_DMSO_200M_050219_1,12362 HBL1_DMSO_200M_050219_1,12362,FALEMQMY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12363 63.346 35.0 1324600.0 25 0 147190.0 + 10876 GAFVHFHGV 9 61 324.16803011028134 969.482260931044 3 324.1679260134697 MULTI CID FTMS 0 0 0 12358 1409001.375 0.5138347782111292 1 -0.104583740234375 5 Unmodified _GAFVHFHGV_ ENSG00000006831|ENST00000357103|ADIPOR2 36.46614268402704 0.0948557732959553 3 [AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}HGV 9 0 + 57.075 0.0 0.0 5.8872 5.8872 91.023 0.0 0.0 0.0 32.76638380027002 6.61159286695316 6.61159286695316 31.480625354554373 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + + [AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}HGV;[AG][YR][NP]HGV 5.8872;2.64 +;- + 62 + 1 1.326 41693.1 1.0 6943 5418 12358 HBL1_DMSO_200M_050219_1,12363 HBL1_DMSO_200M_050219_1,12363,GAFVHFHGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12364 63.347 58.0 809150.0 25 0 58920.0 + 28139 PPPPLLPW 8 85 458.7696166839207 915.5246804346414 2 458.7698242068291 MULTI CID FTMS 0 0 0 12358 1219709.25 0.4961639822339088 1 -0.104583740234375 6 Unmodified _PPPPLLPW_ REV__ENST00000463516.5_1_7:45008881-45008965:-|nuORF 2.889219685676258 0.8067950007271085 3 [EP]{I|L}A 4 -1 14.983 0.0 0.0 1.6366 0.0 0.0 0.0 502.2852754876289 502.2852754876289 3.7241338677670335 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 0.0 [EP]{I|L}A 1.6366 - 41 1 1.326 44658.3 1.0 6944 5418 12358 HBL1_DMSO_200M_050219_1,12364 HBL1_DMSO_200M_050219_1,12364,PPPPLLPW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12365 63.349 93.0 1249100.0 25 0 90244.0 + 24899 MPNTRPPII 9 129 519.791667430783 1037.568781928366 2 519.7927123904228 MULTI CID FTMS 0 0 0 12358 1096247.625 0.100784324388232 13 -0.7847557067871094 7 Unmodified _MPNTRPPII_ ENSG00000084774|ENST00000264705|CAD 72.96794272382148 0.0199516581995792 3 MPNTR 5 4 77.211 0.0 0.0 7.4416 0.0 0.0 0.0 435.2622055479654 435.2622055479654 48.01029995663981 0.0 0.0 0.0 0 1.048455006504028 2.0 0.6237125054200234 0.7302046884880937 + MPNTR 7.4416 + + 396 + 1 1.326 93822.1 1.0 6945 5418 12358 HBL1_DMSO_200M_050219_1,12365 HBL1_DMSO_200M_050219_1,12365,MPNTRPPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12366 63.351 60.0 915970.0 25 0 58363.0 + 13295 HIVEALETDV 10 79 563.2925350003419 1124.5705170674837 2 563.2932006716728 MULTI CID FTMS 0 0 0 12358 960541.3125 0.7016037493464975 1 -0.104583740234375 8 Unmodified _HIVEALETDV_ ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK 40.72490554402381 0.149912226101682 3 [H{I|L}]VEA{I|L}ETDV 10 0 + 78.581 0.0 0.0 6.9877 6.9877 93.074 0.0 0.0 0.0 18.86378109248469 71.61359110675761 18.86378109248469 15.740312677277188 0 1.1237125054200234 1.3979400086720375 0.0 0.0 + + [H{I|L}]VEA{I|L}ETDV;[H{I|L}]V[DV]VETDV;{[QN]|[E{I|L}]|[KN]}[HV]A{I|L}ETDV;[H{I|L}]V[TA]{I|L}EEDV 6.9877;5.588;3.88;3.1261 +;-;-;- + 121 1 1.326 49788.3 1.0 6946 5418 12358 HBL1_DMSO_200M_050219_1,12366 HBL1_DMSO_200M_050219_1,12366,HIVEALETDV False True HIVEALETDV 63.350978 563.293200671673 22263832.0 12358.0 ENSG00000168078|ENST00000301905|PBK;;nc|ENSG00000168078|Q96KB5-2|PBK 7.478194077809651 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12367 63.352 43.0 1865300.0 25 0 203560.0 + -1 AFLQMMCGE 9 107 531.2103231399889 1060.4060933467777 2 531.2097045779228 MULTI CID FTMS 0 0 0 12358 836911.375 0.6277387134062754 -1 0.0760154724121093 9 2 Oxidation (M) _AFLQM(Oxidation (M))M(Oxidation (M))CGE_ REV__ENSG00000181939|ENST00000642128|OR4C15 5.230669730166228 0.7320841359114558 3 {I|L} 1 -1 13.495 0.0 0.0 1.2726 0.0 0.0 929.3109375624013 0.0 929.3109375624013 0.0 2.7815125038364386 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2726 + + 62 + 1 1.326 67540.6 1.0 6947 5418 12358 HBL1_DMSO_200M_050219_1,12367 HBL1_DMSO_200M_050219_1,12367,AFLQMMCGE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12368 63.353 36.0 1929300.0 25 0 364480.0 -1 0 108 509.2747776895272 508.2675012229272 1 509.2718688845634 MULTI CID FTMS 0 0 0 12358 629394.8125 0.4973622357383275 -2 0.116973876953125 10 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D 3 -1 20.458 0.0 0.0 4.025 0.0 0.0 0.0 156.1164751821647 156.1164751821647 3.826637040881593 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D 4.025 - 72 1 1.326 58500.0 1.0 6948 5418 12358 HBL1_DMSO_200M_050219_1,12368 HBL1_DMSO_200M_050219_1,12368, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12369 63.36 375.0 807740.0 25 0 74581.0 36991 TFLMDLSITY 10 156 401.8705817597911 1202.5899158795733 3 401.8708373904228 MULTI CID FTMS 0 0 0 12358 567532.25 0.7773550507828839 -2 0.116973876953125 11 Unmodified _TFLMDLSITY_ ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08|DNAH12 19.256988751693697 0.5244284437930726 3 T{M(Oxidation (M))|F}MWTRKAY 9 6 + 65.505 0.0 0.0 5.447 5.447 85.91 0.0 0.0 0.0 32.796418536855136 11.42667503568731 11.42667503568731 9.208187539523747 0 0.3054621874040891 0.0 0.6139829889124311 0.6747425010840047 T{M(Oxidation (M))|F}MWTRKAY;T{M(Oxidation (M))|F}MWT[VG]KAY;TYD[VS]TRKAY;T{M(Oxidation (M))|F}MWT[KS][R{M(Oxidation (M))|F}];TYD[VS]T[VG]KAY;T{M(Oxidation (M))|F}Y[PG]T[VG]KAY;T{M(Oxidation (M))|F}M{[ET]|[MV]}GRKAY;T{M(Oxidation (M))|F}MW[HV]A[QA]{I|L};TY{M(Oxidation (M))|F}[PG]T[VG]KAY;T{M(Oxidation (M))|F}MY[{I|L}T][HK]Y 5.447;4.6813;4.1992;3.8554;3.4372;3.3772;3.3392;2.9188;2.8951;2.7377 -;-;-;-;-;-;-;-;-;- 1683 + 1 1.326 234224.2 1.0 6949 5418 12358 HBL1_DMSO_200M_050219_1,12369 HBL1_DMSO_200M_050219_1,12369,TFLMDLSITY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12370 63.366 329.0 749880.0 25 0 32269.0 7683 EKPVTLRCQ 9 202 537.2903436613601 1072.56613438952 2 537.2910644412041 MULTI CID FTMS 0 0 0 12358 523803.53125 0.1255624036504422 -4 0.3044586181640625 12 Unmodified _EKPVTLRCQ_ ENSG00000088053|ENST00000310373|GP6;nc|ENSG00000088053|Q9HCN6-2|GP6;nc|ENSG00000088053|Q9HCN6|GP6 17.11289562659939 0.3734572693229295 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[Y{I|L}]VSV 7 7 28.387 0.0 0.0 2.6466 0.0 0.0 0.0 248.1047799906953 248.1047799906953 3.4132024969190056 0.0 0.0 0.0 0 0.0 0.2924298239020636 1.274227503252014 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[Y{I|L}]VSV 2.6466 - 1389 + 1 1.326 193660.1 1.0 6950 5418 12358 HBL1_DMSO_200M_050219_1,12370 HBL1_DMSO_200M_050219_1,12370,EKPVTLRCQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12371 63.372 347.0 608670.0 25 0 43335.0 + 32072 RVLPPSALQSV 11 150 583.8481402842426 1165.6817276352851 2 583.8486816287041 MULTI CID FTMS 0 0 0 12358 433441.5 0.539615000894033 -4 0.3044586181640625 13 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 88.36371040165146 0.0014365852967226 3 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 79.573 0.0 0.0 6.8263 6.8263 89.586 0.0 0.0 0.0 12.02646105705972 51.908748643110826 12.02646105705972 9.128498242811006 0 1.5669015600442575 0.6777807052660807 1.305462187404089 0.5891368308784531 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;{[TV]|[{I|L}S]}[HK][{I|L}A]A{I|L}QSV;[{I|L}P][RV][PS]A{I|L}QSV;[PS][PA]{I|L}[RV]{I|L}QSV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[RV]{I|L}N[{I|L}P]{I|L}QDV;[RV]{I|L}P[PS]RRW;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV;[RV]{I|L}GG[{I|L}P]{I|L}QDV 6.8263;6.0432;4.6885;4.3844;3.7431;3.7033;3.6191;3.0718;2.9171;2.8329 +;-;-;-;-;-;-;-;-;- + 769 1 1.326 158304.4 1.0 6951 5418 12358 HBL1_DMSO_200M_050219_1,12371 HBL1_DMSO_200M_050219_1,12371,RVLPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12372 63.379 380.0 475660.0 25 0 23495.0 + -1 NMFCTRLSRCF 11 150 746.3354360271445 1490.656319121089 2 746.3375732302666 MULTI CID FTMS 0 0 0 12358 418880.125 0.4563986312022075 1 -0.104583740234375 14 2 Carbamidomethyl (C) _NMFC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 13.042465956692816 0.7638483625850725 3 [MN]PN{I|L}NADQRS[MT] 13 -1 + 98.982 0.0 0.0 6.6401 6.6401 82.061 0.0 0.0 0.0 20.36571645525153 2.698405410982616 2.698405410982616 2.698405410982616 0 0.9916440611282626 1.5228787452803376 0.8807196863200843 1.5356668758921828 [MN]PN{I|L}NADQRS[MT];[MN]PN{I|L}NADQRGD{M(Oxidation (M))|F};[MN]PGG{I|L}NADQRS[MT];[MN]PN{I|L}GGADQRS[MT];[MN]PN{I|L}NAD[AG]RS[MT];[MN]PN{I|L}NADQ[VG]S[MT];[MN]PN{I|L}NADQ[VG]GD{M(Oxidation (M))|F};[MN]PN{I|L}NAD[AG]RGD{M(Oxidation (M))|F};[MN]PGG{I|L}NADQRGD{M(Oxidation (M))|F};[MN]PN{I|L}GGADQRGD{M(Oxidation (M))|F} 6.6401;6.4591;6.0315;6.0315;6.0315;6.0315;5.8505;5.8505;5.8505;5.8505 -;-;-;-;-;-;-;-;-;- 10781 + 1 1.326 127667.8 1.0 6952 5418 12358 HBL1_DMSO_200M_050219_1,12372 HBL1_DMSO_200M_050219_1,12372,NMFCTRLSRCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12373 63.388 477.0 218370.0 25 0 39410.0 -1 0 83 1002.5534529779246 2003.0923530226487 2 1003.05870360136 MULTI CID FTMS 0 0 0 12358 269491.90625 0.7737822254444178 -1 0.0760154724121093 15 3 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DQSQS 8 -1 40.544 0.0 0.0 2.0241 0.0 0.0 0.0 1123.6719178021992 1123.6719178021992 20.80173315600404 0.0 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.6505149978319906 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DQSQS 2.0241 - 1023 1 1.326 74513.5 1.0 6953 5418 12358 HBL1_DMSO_200M_050219_1,12373 HBL1_DMSO_200M_050219_1,12373, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12374 63.396 463.0 382410.0 25 0 30140.0 + 38963 TVPKPDVVVQV 11 197 590.8506155002312 1179.6866780672624 2 590.8502685427666 MULTI CID FTMS 0 0 0 12358 184757.75 0.1252749810336718 -4 0.3044586181640625 16 Unmodified _TVPKPDVVVQV_ ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1 42.312485326615175 0.1767732348921932 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[PA]GAVVV{[QV]|[N{I|L}]|[RA]|[KV]} 12 5 + 36.517 0.0 0.0 3.0955 3.0955 68.101 0.0 0.0 0.0 3.144987369960603 3.0568399284420167 3.0568399284420167 0.5912145211865578 0 0.6747425010840047 1.3979400086720375 0.2302046884880938 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[PA]GAVVV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[PA]QVVV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[QP]AVVV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[PA]GVAVV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[PA]RAVV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[QP]VAVV{[QV]|[N{I|L}]|[RA]|[KV]};[VP]DVVGAVVV{[QV]|[N{I|L}]|[RA]|[KV]};[VP]DVVQVVV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[PA][KP]TV{[QV]|[N{I|L}]|[RA]|[KV]};[DP]VVVGAVVV{[QV]|[N{I|L}]|[RA]|[KV]} 3.0955;3.0454;2.9395;2.9074;2.8573;2.7514;2.422;2.3719;2.3707;2.2511 -;-;-;-;-;-;-;-;-;- 5677 1 1.326 135170.2 1.0 6954 5418 12358 HBL1_DMSO_200M_050219_1,12374 HBL1_DMSO_200M_050219_1,12374,TVPKPDVVVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12375 63.405 542.0 320860.0 25 0 23084.0 -1 NVIIKQMI 8 217 487.79066693232784 973.5667809314556 2 488.2867614626884 MULTI CID FTMS 0 0 0 -1 0 17 Oxidation (M) _NVIIKQM(Oxidation (M))I_ ENSG00000224960|ENST00000412172|PPP4R3C;nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C 13.50788311687929 0.7113601687236069 3 [{I|L}P][KT]K{M(Oxidation (M))|F}P[SG] 9 -1 + 21.038 0.0 0.0 2.161 2.161 79.709 0.0 0.0 0.0 8.274277318661852 7.147642715192509 7.147642715192509 13.979400086720378 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}P][KT]K{M(Oxidation (M))|F}P[SG];{[NV]|[RG]}{I|L}{I|L}K{M(Oxidation (M))|F}P[SG];{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}V]K{M(Oxidation (M))|F}P[SG];{[VA]|[{I|L}G]}G[{I|L}V]K{M(Oxidation (M))|F}P[SG];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}KP[KP]V 2.161;0.72507;0.29883;0.20128;0.030879 -;-;-;-;- 838 1 1.326 133255.0 1.0 6955 5418 12358 HBL1_DMSO_200M_050219_1,12375 HBL1_DMSO_200M_050219_1,12375,NVIIKQMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12376 63.417 595.0 341160.0 25 0 17137.0 + 41259 VPGRFVPPA 9 213 470.2722316846463 938.5299104360926 2 470.2736694216728 MULTI CID FTMS 0 0 0 12358 152557.640625 0.1566558356125419 -5 0.3481292724609375 18 Unmodified _VPGRFVPPA_ REV__ENST00000263071.8_1_17:1543248-1547228:-|nuORF 13.50788311687929 0.4710407108020397 3 MP{I|L}K[VS]PPA 9 -1 + 41.424 0.0 0.0 4.4137 4.4137 85.803 0.0 0.0 0.0 29.20542025643396 4.303335376747306 4.303335376747306 25.409937007646104 0 0.555462187404089 0.3979400086720376 0.3252574989159953 0.0 MP{I|L}K[VS]PPA;MP{I|L}Q[Q{I|L}]P{I|L};[VG]{[ET]|[MV]}R{I|L}[HK];{[CP]|[EA]}[VS]R{I|L}[HK];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}V][VS]PPA;MP{I|L}[AG][Q{I|L}]P{I|L};[{I|L}T][DG]R{I|L}[HK];{[QN]|[E{I|L}]|[KN]}[SG]R{I|L}[HK];[VG]{[ET]|[MV]}[VG]{I|L}[HK];{[CP]|[EA]}[VS][VG]{I|L}[HK] 4.4137;1.7063;1.3939;1.3394;0.9562;0.71941;0.49905;0.40702;0.40702;0.35252 -;-;-;-;-;-;-;-;-;- 847 + 1 1.326 153183.3 1.0 6956 5418 12358 HBL1_DMSO_200M_050219_1,12376 HBL1_DMSO_200M_050219_1,12376,VPGRFVPPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12377 63.428 622.0 180450.0 25 0 6070.0 + 45769 YYITNDTVQTY 11 153 690.8192090097036 1379.6238650862072 2 690.8203002810478 MULTI CID FTMS 0 0 0 12358 101001.421875 0.0085401309796669 16 -0.8841743469238281 19 Unmodified _YYITNDTVQTY_ ENSG00000144028|ENST00000323853|SNRNP200 13.042465956692816 0.7638483625850725 3 {[QN]|[E{I|L}]|[KN]}GM 4 9 21.99 0.0 0.0 1.5939 0.0 0.0 0.0 946.4115902661478 946.4115902661478 2.5390774695145346 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.4247425010840047 0.6694451763165201 {[QN]|[E{I|L}]|[KN]}GM 1.5939 - 1831 1 1.326 86754.6 1.0 6957 5418 12358 HBL1_DMSO_200M_050219_1,12377 HBL1_DMSO_200M_050219_1,12377,YYITNDTVQTY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12378 63.442 800.0 554360.0 25 0 87721.0 + 8993 FAVPKNYKL 9 270 360.5462985856148 1078.6170663570445 3 360.8807556033134 MULTI CID FTMS 0 0 0 12358 106988.265625 0.3640601820053941 -3 0.2123603820800781 20 Unmodified _FAVPKNYKL_ ENSG00000167005|ENST00000300291|NUDT21 51.629811660486645 0.0367964933207742 3 {[MS]|[{M(Oxidation (M))|F}A]}VPKNYK{I|L} 9 0 + 52.242 0.0 0.0 4.8434 4.8434 81.686 0.0 0.0 0.0 10.820820496292178 12.98332479720628 10.820820496292178 7.257724967479859 0 0.4247425010840047 0.0 0.0 1.1672951333760408 + + {[MS]|[{M(Oxidation (M))|F}A]}VPKNYK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GPKNYK{I|L};{[MS]|[{M(Oxidation (M))|F}A]}VPKGGYK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GPKGGYK{I|L};{[MS]|[{M(Oxidation (M))|F}A]}V{I|L}[C(Carbamidomethyl (C))K]TK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L}[C(Carbamidomethyl (C))K]TK{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}V[C(Carbamidomethyl (C))K]TK{I|L};[QP][TP]{I|L}KPG{[QN]|[E{I|L}]|[KN]};{[MS]|[{M(Oxidation (M))|F}A]}VVA[KC]TK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV[C(Carbamidomethyl (C))K]TK{I|L} 4.8434;4.1705;3.9897;3.3168;3.1189;2.446;2.1963;1.6335;1.5437;1.5234 +;-;-;-;-;-;-;-;-;- + 1017 + 1 1.326 359099.8 0.9200000166893004 6958 5418 12358 HBL1_DMSO_200M_050219_1,12378 HBL1_DMSO_200M_050219_1,12378,FAVPKNYKL True True FAVPKNYKL 63.441705 360.880755603313 3003886.25 12358.0 ENSG00000167005|ENST00000300291|NUDT21 5.409087975819905 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12380 63.446 1.9 16413000.0 25 0 1787700.0 + 929 AFIDQSQSL 9 57 504.7529094998892 1007.4912660665784 2 504.7533752322197 MULTI CID FTMS 0 0 0 12379 23104910.0 0.5596661959041335 1 -0.0826683044433593 1 Unmodified _AFIDQSQSL_ ENSG00000167325|ENST00000300738|RRM1 32.30548876998284 0.1201446275138228 3 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DQS 6 3 23.645 0.0 0.0 2.3469 0.0 0.0 0.0 343.16189529925344 343.16189529925344 1.5889575636790632 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DQS 2.3469 + + 79 1 1.326 32483.6 1.0 6959 5419 12379 HBL1_DMSO_200M_050219_1,12380 HBL1_DMSO_200M_050219_1,12380,AFIDQSQSL True True AFIDQSQSL 63.445857 504.75337523222 788244800.0 12379.0 ENSG00000167325|ENST00000300738|RRM1 4.989785989125569 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12381 63.447 58.0 1354700.0 25 0 147800.0 + 10878 GAFVHFHGV 9 103 485.7485832578763 969.4826135825526 2 485.7485229372978 MULTI CID FTMS 0 0 0 12379 502995.90625 0.1144411209291875 2 -0.1471366882324218 2 Unmodified _GAFVHFHGV_ ENSG00000006831|ENST00000357103|ADIPOR2 56.04830969593885 0.0282699710924866 3 QV{M(Oxidation (M))|F}H{M(Oxidation (M))|F}HGV 8 3 + 64.726 0.0 0.0 6.6763 6.6763 80.42 0.0 0.0 0.0 47.44548056149294 7.415223550214826 7.415223550214826 1.524494976091901 0 0.9386218330464624 1.154901959985743 0.0 0.0 QV{M(Oxidation (M))|F}H{M(Oxidation (M))|F}HGV;[AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}HGV;QV{M(Oxidation (M))|F}[TA][YE]{I|L};[AG]{M(Oxidation (M))|F}V[TA][YE]{I|L};QV[YG]V[YE]{I|L};[AG]{M(Oxidation (M))|F}[TA]V[YE]{I|L};[AG][YR][NP]HGV;{[VA]|[{I|L}G]}GG[{M(Oxidation (M))|F}V]QHR;[AG]VG[{M(Oxidation (M))|F}V]QHR;{[VA]|[{I|L}G]}N[{M(Oxidation (M))|F}V]QHR 6.6763;6.5191;3.6669;3.5096;2.6077;2.4505;2.2128;1.7822;1.7448;1.6528 -;+;-;-;-;-;-;-;-;- + 613 + 1 1.326 65165.7 1.0 6960 5419 12379 HBL1_DMSO_200M_050219_1,12381 HBL1_DMSO_200M_050219_1,12381,GAFVHFHGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12382 63.448 14.0 5252300.0 25 0 481040.0 10709 FWFYYATL 8 98 555.766591608785 1109.51863028437 2 555.7675659060478 MULTI CID FTMS 0 0 0 12379 4238823.0 0.1724598760775835 -3 0.2215576171875 3 Unmodified _FWFYYATL_ ENSG00000171451|ENST00000310045|DSEL 20.871210003555333 0.6025813472596342 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}GC{I|L}T{I|L}[Y{M(Oxidation (M))|F}] 9 6 + 36.766 0.0 0.0 3.3137 3.3137 68.167 0.0 0.0 0.0 5.312639135582543 4.762036441594191 4.762036441594191 0.4575749056067479 0 0.5 0.0 0.6694451763165201 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}GC{I|L}T{I|L}[Y{M(Oxidation (M))|F}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C)){I|L}T{I|L}[Y{M(Oxidation (M))|F}];AAW{I|L}T{I|L}CG[{M(Oxidation (M))|F}E];AAW{I|L}T{I|L}C(Carbamidomethyl (C))[{M(Oxidation (M))|F}E];{[QD]|[EN]|[WG]|[KD]|[RS]}VVT{I|L}CG[{M(Oxidation (M))|F}E];{[QD]|[EN]|[WG]|[KD]|[RS]}VVT{I|L}C(Carbamidomethyl (C))[{M(Oxidation (M))|F}E];[{I|L}T][RP]{[MG]|[TS]}CG[{M(Oxidation (M))|F}E];[{I|L}T][RP]{[MG]|[TS]}C(Carbamidomethyl (C))[{M(Oxidation (M))|F}E];[{I|L}T][RP]AADTYC;AAW{I|L}T{I|L}AA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3.3137;3.2725;2.8424;2.7963;2.4838;2.4377;1.782;1.7359;1.7334;1.6078 -;-;-;-;-;-;-;-;-;- 449 + 1 1.326 62790.4 1.0 6961 5419 12379 HBL1_DMSO_200M_050219_1,12382 HBL1_DMSO_200M_050219_1,12382,FWFYYATL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12383 63.45 14.0 3297300.0 25 0 645980.0 15800 ISETVGLKI 9 72 480.2923522180862 958.5701515029724 2 480.2925292849541 MULTI CID FTMS 0 0 0 12379 3839721.25 0.4946151946126827 -1 0.104583740234375 4 Unmodified _ISETVGLKI_ ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1 26.88365393820708 0.1891292719743517 3 {I|L}{I|L}TD{I|L}[KG]S{I|L} 9 6 + 69.32 0.0 0.0 7.2317 7.2317 87.377 0.0 0.0 0.0 36.47817481888637 5.230012720637376 5.230012720637376 5.230012720637376 0 0.4247425010840047 2.0 0.25 0.0 {I|L}{I|L}TD{I|L}[KG]S{I|L};{I|L}{I|L}TD{I|L}T[KG]V;{I|L}{I|L}TD{I|L}[KG]TV;{I|L}{I|L}[RP][HQ]PV 7.2317;6.686;6.3188;3.4865 -;-;-;- 88 + 1 1.326 40678.0 1.0 6962 5419 12379 HBL1_DMSO_200M_050219_1,12383 HBL1_DMSO_200M_050219_1,12383,ISETVGLKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12384 63.451 23.0 3332700.0 25 0 125340.0 + + -1 RVLDINPQV 9 114 527.7673082314394 0 527.7698852419853 PEAK CID FTMS 0 0 0 12379 1626969.25 0.3678566046600648 -4 0.3169441223144531 5 Oxidation (M) _AMM(Oxidation (M))RRFQV_ nc|ENSG00000166004|Q9C0D2-4|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295;ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-2|CEP295 24.67388899826682 0.3296343502680589 3 Q{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}PQ 7 -1 20.864 0.0 0.0 1.9804 0.0 0.0 117.07636673735529 114.0566652887328 231.13303202608807 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.3252574989159953 1.0 Q{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}PQ 1.9804 - 544 + 1 1.326 65239.7 1.0 6963 5419 12379 HBL1_DMSO_200M_050219_1,12384 HBL1_DMSO_200M_050219_1,12384,AMMRRFQV False False RVLDINPQV 63.450846 527.769885241985 13080287.0 12379.0 nc|ENSG00000166004|Q9C0D2-4|CEP295;;nc|ENSG00000166004|Q9C0D2-3|CEP295;;ENSG00000166004|ENST00000325212|CEP295;;nc|ENSG00000166004|Q9C0D2-2|CEP295 3.657566467920939 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12385 63.452 42.0 1822700.0 25 0 225720.0 + 16519 KAQDEIPAL 9 80 492.7729268226579 983.5313007121158 2 492.7723571658134 MULTI CID FTMS 0 0 0 12379 1372176.375 0.9194044874003084 -1 0.104583740234375 6 Unmodified _KAQDEIPAL_ ENSG00000013275|ENST00000157812|PSMC4;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;ENST00000596386.1_1_19:40477100-40485896:+|nuORF;ENST00000601697.5_1_19:40477100-40486546:+|nuORF;nc|ENSG00000013275|P43686-2|PSMC4 27.628801355627647 0.1796483985696185 3 [{I|L}V]DDE{I|L} 6 6 33.121 0.0 0.0 3.3676 0.0 0.0 0.0 296.1627662780235 296.1627662780235 11.04303111733195 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.3494850021680094 0.0 [{I|L}V]DDE{I|L} 3.3676 - 47 1 1.326 61781.4 1.0 6964 5419 12379 HBL1_DMSO_200M_050219_1,12385 HBL1_DMSO_200M_050219_1,12385,KAQDEIPAL False True KAQDEIPAL 63.452026 492.772357165813 24524606.0 12379.0 ENSG00000013275|ENST00000157812|PSMC4;;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;;ENST00000596386.1_1_19:40477100-40485896:+|nuORF;;nc|ENSG00000013275|P43686-2|PSMC4;;ENST00000601697.5_1_19:40477100-40486546:+|nuORF 2.336114327112833 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12386 63.453 55.0 1060900.0 25 0 123770.0 + + 7404 MVADKFTEL 9 92 534.7706123714519 1067.5266718097037 2 535.2650634646416 MULTI CID FTMS 0 0 0 12379 1016292.8125 0.2131169922632092 -4 0.3169441223144531 7 Unmodified _EGKFTTWSL_ ENSG00000105568|ENST00000322088|PPP2R1A 16.149105407346934 0.3995459350917656 3 {[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}TEV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 9 -1 + 32.47 0.0 0.0 3.0416 3.0416 50.274 0.0 0.0 0.0 3.28396073130169 4.137342758552698 3.28396073130169 0.0 0 0.3494850021680094 0.0 0.6307196863200843 0.1989700043360188 {[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}TEV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}ATEV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[MS]|[{M(Oxidation (M))|F}A]}[TA]ATEV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{M(Oxidation (M))|F}V][KS]TEV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}TAEV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[MS]|[{M(Oxidation (M))|F}A]}[TA]TAEV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[MS]|[{M(Oxidation (M))|F}A]}WTGEV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[MS]|[{M(Oxidation (M))|F}A]}WTWV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[QP][HV]TEV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[VP][HQ]TEV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 3.0416;3.0416;2.734;2.1221;1.8934;1.5857;1.5779;1.4395;1.2757;1.2369 -;-;-;-;-;-;-;-;-;- 407 1 1.326 49415.4 1.0 6965 5419 12379 HBL1_DMSO_200M_050219_1,12386 HBL1_DMSO_200M_050219_1,12386,EGKFTTWSL False False MVADKFTEL 63.453442 535.265063464642 32609674.0 12379.0 ENSG00000105568|ENST00000322088|PPP2R1A 4.631277084350586 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12387 63.455 59.0 1599600.0 25 0 447290.0 28477 PTISLRSKSM 10 81 560.3110074710612 1118.6074620089223 2 560.3130981326103 MULTI CID FTMS 0 0 0 12379 836403.375 0.0464870192025518 -4 0.3169441223144531 8 Unmodified _PTISLRSKSM_ ENSG00000161681|ENST00000293441|SHANK1;nc|ENSG00000161681|Q9Y566-2|SHANK1;nc|ENSG00000161681|Q9Y566-3|SHANK1 25.399314129420983 0.3980215340001851 3 [TP]{I|L}S 4 6 31.56 0.0 0.0 2.8213 0.0 0.0 0.0 717.3670804994098 717.3670804994098 13.227073294202205 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.9163865622122672 0.0 + [TP]{I|L}S 2.8213 + + 151 1 1.326 81737.7 1.0 6966 5419 12379 HBL1_DMSO_200M_050219_1,12387 HBL1_DMSO_200M_050219_1,12387,PTISLRSKSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12388 63.458 141.0 576640.0 25 0 60537.0 + -1 AFIDTMEGF 9 105 349.4872381851968 1045.4398851557903 3 349.4868957400322 MULTI CID FTMS 0 0 0 12379 608984.5 1.0 0 0.0 9 Oxidation (M) _AFIDTM(Oxidation (M))EGF_ REV__ABCB1|p.T215Pfs*3|1|0.24|ENSG00000085563|chr7:87566129-87566129|T/-|frameshift_variant;REV__ENSG00000085563|ENST00000622132|ABCB1;REV__nc|ENSG00000085563|P08183-2|ABCB1 15.248480904072842 0.4239247793462406 3 A{I|L}{M(Oxidation (M))|F}D 4 -1 35.745 0.0 0.0 3.4192 0.0 0.0 0.0 596.2007417662254 596.2007417662254 22.64645333192 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 A{I|L}{M(Oxidation (M))|F}D 3.4192 - 92 + 1 1.326 72846.4 1.0 6967 5419 12379 HBL1_DMSO_200M_050219_1,12388 HBL1_DMSO_200M_050219_1,12388,AFIDTMEGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12389 63.46 125.0 1141800.0 25 0 172530.0 2352 AQLLNRAQ 8 163 457.2640638459234 912.5135747586468 2 457.2644225955009 MULTI CID FTMS 0 0 0 12379 479314.3125 0.2643471102616616 7 -0.4039192199707031 10 Unmodified _AQLLNRAQ_ ENSG00000134686|ENST00000683057|PHC2;nc|ENSG00000134686|Q8IXK0-4|PHC2;nc|ENSG00000134686|Q8IXK0|PHC2 4.75600775471527 0.7954636275367004 3 [EP]{I|L}AQ 5 5 21.427 0.0 0.0 2.3481 0.0 0.0 0.0 371.2155760616344 371.2155760616344 10.006691753861308 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.0 0.0 [EP]{I|L}AQ 2.3481 - 257 1 1.326 114343.5 1.0 6968 5419 12379 HBL1_DMSO_200M_050219_1,12389 HBL1_DMSO_200M_050219_1,12389,AQLLNRAQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12390 63.467 350.0 495210.0 25 0 20456.0 + 16581 KDKSPKRNSV 10 183 579.8339686397936 1157.6533843463872 2 579.8348876833916 MULTI CID FTMS 0 0 0 12379 443474.25 0.6648574422959528 -1 0.104583740234375 11 Unmodified _KDKSPKRNSV_ REV__ENSG00000113327|ENST00000639213|GABRG2;REV__nc|ENSG00000113327|P18507-1|GABRG2;REV__nc|ENSG00000113327|P18507-3|GABRG2 31.26834338654808 0.266153677697784 3 [{I|L}P]KTMRPH{I|L} 9 -1 44.518 0.0 0.0 3.8455 0.0 0.0 0.0 81.01537906508466 81.01537906508466 2.399770288315139 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.0044321917401078 0.805462187404089 [{I|L}P]KTMRPH{I|L} 3.8455 - 5931 1 1.326 131789.3 1.0 6969 5419 12379 HBL1_DMSO_200M_050219_1,12390 HBL1_DMSO_200M_050219_1,12390,KDKSPKRNSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12391 63.475 452.0 463100.0 25 0 57587.0 19574 LFTPCSYVC 9 197 344.82358663297043 1031.4489304991114 3 344.8237487673759 MULTI CID FTMS 0 0 0 12379 404517.21875 1.0 0 0.0 12 Unmodified _LFTPCSYVC_ ENSG00000198794|ENST00000425597|SCAMP5;ENST00000565923.5_1_15:75287957-75310150:+|nuORF;nc|ENSG00000198794|Q8TAC9-2|SCAMP5 8.593279151180031 0.6146971463335029 3 {I|L} 1 8 14.604 0.0 0.0 1.4159 0.0 0.0 900.3537747147349 0.0 900.3537747147349 0.0 5.974883016080273 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4159 + + 211 + 1 1.326 169592.0 1.0 6970 5419 12379 HBL1_DMSO_200M_050219_1,12391 HBL1_DMSO_200M_050219_1,12391,LFTPCSYVC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12392 63.483 475.0 299440.0 25 0 54425.0 + -1 FFRCLKLTKQF 11 92 744.4115159333669 1486.8084789335337 2 744.4125244021416 MULTI CID FTMS 0 0 0 12379 251042.53125 1.0 0 0.0 13 Carbamidomethyl (C) _FFRC(Carbamidomethyl (C))LKLTKQF_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__ENST00000498289.5_1_1:169773308-169819597:+|nuORF;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM 2.735195868890462 0.8622431031272658 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}ATA{I|L}R{I|L} 9 -1 50.583 0.0 0.0 3.4021 0.0 0.0 0.0 488.1822607418923 488.1822607418923 20.68388844979509 0.0 0.0 0.0 0 0.5 0.0 1.6989700043360187 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}ATA{I|L}R{I|L} 3.4021 - 2072 1 1.326 102703.7 1.0 6971 5419 12379 HBL1_DMSO_200M_050219_1,12392 HBL1_DMSO_200M_050219_1,12392,FFRCLKLTKQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12393 63.491 461.0 330660.0 25 0 52786.0 39450 VAPDRLRFDF 10 129 618.3322335204191 1234.649914107638 2 618.3347045779228 MULTI CID FTMS 0 0 0 12379 203923.234375 0.5038290521081848 3 -0.210174560546875 14 Unmodified _VAPDRLRFDF_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 12.240655878213236 0.6421556946785427 3 {[VA]|[{I|L}G]}PDE{I|L}R 7 4 57.791 0.0 0.0 4.6808 0.0 0.0 0.0 451.21796594791255 451.21796594791255 23.794482255454525 0.0 0.0 0.0 0 0.0 2.0 0.2742275032520141 0.3807196863200844 {[VA]|[{I|L}G]}PDE{I|L}R 4.6808 - 637 + 1 1.326 112882.3 1.0 6972 5419 12379 HBL1_DMSO_200M_050219_1,12393 HBL1_DMSO_200M_050219_1,12393,VAPDRLRFDF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12394 63.5 517.0 417260.0 25 0 30768.0 + 40219 VGRLQGLTV 9 182 471.7894378512418 941.5643227692836 2 471.7905456423759 MULTI CID FTMS 0 0 0 12379 203249.65625 0.3575854649399614 -3 0.2215576171875 15 Unmodified _VGRLQGLTV_ ENSG00000135476|ENST00000257934|ESPL1;nc|ENSG00000135476|Q14674-2|ESPL1 52.268347100219714 0.0353964759249114 3 [VG]R{I|L}QG{I|L}TV 9 0 + 52.106 0.0 0.0 5.534 5.534 83.109 0.0 0.0 0.0 7.295420423540378 16.478174818886373 7.295420423540378 6.262874945799766 0 0.5 1.2218487496163564 0.4247425010840047 0.3252574989159953 + + [VG]R{I|L}QG{I|L}TV;[VG]R{I|L}QAVTV;{[TV]|[{I|L}S]}A[KA][PG]VTV;[VG]R{I|L}QGT{I|L}V;[VG]R{I|L}[AG]G{I|L}TV;{[TV]|[{I|L}S]}A[KA][RP]TV;{[VA]|[{I|L}G]}Q[RV]G{I|L}TV;{[TV]|[{I|L}S]}A[KA][KP]EV;{[VA]|[{I|L}G]}[RV]QG{I|L}TV;[VG]R[QA]V{I|L}TV 5.534;4.8689;4.7592;4.5804;4.5561;4.3852;4.239;4.1738;4.1549;4.0493 +;-;-;-;-;-;-;-;-;- + 2978 1 1.326 163643.5 1.0 6973 5419 12379 HBL1_DMSO_200M_050219_1,12394 HBL1_DMSO_200M_050219_1,12394,VGRLQGLTV True True VGRLQGLTV 63.500402 471.790545642376 3554647.0 12379.0 nc|ENSG00000135476|Q14674-2|ESPL1;;ENSG00000135476|ENST00000257934|ESPL1 1.0312011608233054 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12395 63.512 640.0 572630.0 25 0 93400.0 + 31071 RLLCSMKGL 9 247 340.86080634681554 1019.5605896406466 3 340.8601257205009 MULTI CID FTMS 0 0 0 12379 188493.515625 0.400016639195525 -7 0.5139083862304688 16 Unmodified _RLLCSMKGL_ REV__ENSG00000083807|ENST00000263093|SLC27A5;REV__nc|ENSG00000083807|Q9Y2P5-2|SLC27A5 8.155526934196011 0.6299788542272896 3 SQM{I|L}{I|L} 5 -1 18.188 0.0 0.0 1.7839 0.0 0.0 429.2270985334 0.0 429.2270985334 0.0 0.2680249241196719 0.0 0.0 0 0.1989700043360188 0.0 0.0 0.0 SQM{I|L}{I|L} 1.7839 - 311 1 1.326 291332.2 1.0 6974 5419 12379 HBL1_DMSO_200M_050219_1,12395 HBL1_DMSO_200M_050219_1,12395,RLLCSMKGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12396 63.521 496.0 205290.0 25 0 20552.0 + 34617 SPLPQLQMEQY 11 111 667.3291639668647 1332.643775000529 2 667.8315307497978 MULTI CID FTMS 0 0 0 12379 189878.46875 1.0 0 0.0 17 Unmodified _SPLPQLQMEQY_ REV__ENSG00000170145|ENST00000304987|SIK2 7.608950283845883 0.8392484121837455 3 [{I|L}P]SP{I|L}KQT{I|L} 9 -1 37.449 0.0 0.0 2.8101 0.0 0.0 0.0 352.026546613157 352.026546613157 12.00372811378054 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9916440611282626 0.3252574989159953 [{I|L}P]SP{I|L}KQT{I|L} 2.8101 - 995 1 1.326 79233.4 1.0 6975 5419 12379 HBL1_DMSO_200M_050219_1,12396 HBL1_DMSO_200M_050219_1,12396,SPLPQLQMEQY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12397 63.524 148.0 191100.0 25 0 20734.0 -1 0 57 573.9362657637175 1718.7869678913526 3 573.9368163943291 MULTI CID FTMS 0 0 0 12379 124846.46875 0.2553388138054312 -2 0.1805992126464843 18 3 SY 2 -1 14.693 0.0 0.0 0.85483 0.0 0.0 1450.6805663794369 0.0 1450.6805663794369 0.0 4.23516269895728 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 0.85483 - 50 + 1 1.326 29039.2 1.0 6976 5419 12379 HBL1_DMSO_200M_050219_1,12397 HBL1_DMSO_200M_050219_1,12397, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12399 63.529 0.2 235500000.0 25 0 20330000.0 + 27894 PLSPLFLPL 9 78 498.8078646768776 995.6011764205552 2 498.8086730837822 MULTI CID FTMS 0 0 0 12398 275220576.0 0.5717410586882222 -3 0.2632675170898437 1 Unmodified _PLSPLFLPL_ REV__ENST00000314940.6_1_5:137089877-137089988:-|nuORF 67.34385681178166 0.0221257235307089 3 {I|L}PSP{I|L}[KQ]T{I|L} 9 -1 + 68.949 0.0 0.0 6.9253 6.9253 84.063 0.0 0.0 0.0 18.52523206350085 6.912601119898902 6.912601119898902 3.1857177957124065 0 1.9049471895720984 1.6989700043360187 0.4247425010840047 0.0 {I|L}PSP{I|L}[KQ]T{I|L};{I|L}PSP{I|L}{M(Oxidation (M))|F}P{I|L}{I|L};[{I|L}P]SP{I|L}{M(Oxidation (M))|F}P{I|L}{I|L};[{I|L}P]SKQTP{I|L}{I|L};[PS]{I|L}P{I|L}{M(Oxidation (M))|F}P{I|L}{I|L};[PS]{I|L}KQTP{I|L}{I|L};[{I|L}P]SKAASP{I|L}{I|L};[PS]{I|L}KAASP{I|L}{I|L};[{I|L}P]KQTSP{I|L}{I|L};[{I|L}P]SK[AG]TP{I|L}{I|L} 6.9253;6.6053;6.3693;6.2668;6.231;6.1285;5.8212;5.6828;5.3822;5.342 -;-;-;-;-;-;-;-;-;- 603 + 1 1.31 42312.1 1.0 6977 5420 12398 HBL1_DMSO_200M_050219_1,12399 HBL1_DMSO_200M_050219_1,12399,PLSPLFLPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12400 63.53 4.5 6134800.0 25 0 756080.0 + 5023 DGWDRTPQI 9 60 544.2616488323611 1086.508744731522 2 544.2621948122978 MULTI CID FTMS 0 0 0 12398 12255550.0 1.0 0 0.0 2 Unmodified _DGWDRTPQI_ ENSG00000100330|ENST00000401950|MTMR3;ENSG00000108389|ENST00000682306|MTMR4;nc|ENSG00000100330|Q13615-2|MTMR3;nc|ENSG00000100330|Q13615-3|MTMR3;nc|ENSG00000108389|Q9NYA4|MTMR4 41.95555342248728 0.0647214845423414 3 [DG]WDRT[QP]{I|L} 9 0 + 39.856 0.0 0.0 3.6683 3.6683 79.365 0.0 0.0 0.0 9.006153678640882 16.2101498947667 9.006153678640882 9.006153678640882 0 1.5924778212679485 1.0969100130080565 0.3252574989159953 0.0 + + [DG]WDRT[QP]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DDRT[QP]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DWW[QP]{I|L} 3.6683;2.8393;1.9502 +;-;- + 72 1 1.31 27671.3 1.0 6978 5420 12398 HBL1_DMSO_200M_050219_1,12400 HBL1_DMSO_200M_050219_1,12400,DGWDRTPQI True True DGWDRTPQI 63.529704 544.262194812298 334094064.0 12398.0 ENSG00000100330|ENST00000401950|MTMR3;;nc|ENSG00000100330|Q13615-3|MTMR3;;nc|ENSG00000108389|Q9NYA4|MTMR4;;nc|ENSG00000100330|Q13615-2|MTMR3;;ENSG00000108389|ENST00000682306|MTMR4 6.047889073689778 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12401 63.531 14.0 2769400.0 25 0 163630.0 + 38306 TQIDHYVGI 9 76 523.268995024794 1044.523437116388 2 523.2693969607353 MULTI CID FTMS 0 0 0 12398 3388469.75 0.5895981926831403 2 -0.1275062561035156 3 Unmodified _TQIDHYVGI_ ENSG00000133318|ENST00000377819|RTN3;nc|ENSG00000133318|O95197-2|RTN3;nc|ENSG00000133318|O95197-3|RTN3;nc|ENSG00000133318|O95197-4|RTN3;nc|ENSG00000133318|O95197-7|RTN3 18.1463463914782 0.3454829746528889 3 [HD]{I|L}YR[WR] 7 7 + 21.215 0.0 0.0 2.031 2.031 66.986 0.0 0.0 0.0 0.860206705779305 3.5902194264166774 0.860206705779305 0.860206705779305 0 0.0 0.0 0.0 0.0 [HD]{I|L}YR[WR];{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}YVG[WR];{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}YR[WR];[HD]Y{I|L}R[WR];[NP][PG]YR[WR];[HD][WR]Y[R{I|L}];[HD]Y[WR][R{I|L}] 2.031;1.9487;1.6232;1.3619;1.15;0.81231;0.14313 -;-;-;-;-;-;- 107 1 1.31 36167.6 1.0 6979 5420 12398 HBL1_DMSO_200M_050219_1,12401 HBL1_DMSO_200M_050219_1,12401,TQIDHYVGI False True TQIDHYVGI 63.530883 523.269396960735 47754624.0 12398.0 nc|ENSG00000133318|O95197-3|RTN3;;nc|ENSG00000133318|O95197-7|RTN3;;ENSG00000133318|ENST00000377819|RTN3;;nc|ENSG00000133318|O95197-4|RTN3;;nc|ENSG00000133318|O95197-2|RTN3 3.503084421157837 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12402 63.532 19.0 1806300.0 25 0 322480.0 + 41156 VPAPAAAAL 9 63 390.7332607122618 779.4519684913237 2 390.7329894900322 MULTI CID FTMS 0 0 0 12398 3041219.0 1.0 0 0.0 4 Unmodified _VPAPAAAAL_ REV__ENST00000603791.1_1_6:3751383-3751677:+|nuORF 0.0 0.9146841635160942 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.31 34033.1 1.0 6980 5420 12398 HBL1_DMSO_200M_050219_1,12402 HBL1_DMSO_200M_050219_1,12402,VPAPAAAAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12403 63.533 15.0 2301600.0 25 0 333680.0 + 40953 VLVEKREL 8 60 493.30626251013285 984.5979720870656 2 493.3061706423759 MULTI CID FTMS 0 0 0 12398 2843465.25 0.7605002673885825 -1 0.0826683044433593 5 Unmodified _VLVEKREL_ REV__ENSG00000162512|ENST00000339394|SDC3 18.13498045792455 0.6430038125133779 3 [{I|L}V]V 3 -1 34.705 0.0 0.0 3.5248 0.0 0.0 0.0 670.3544538215762 670.3544538215762 22.23074980804633 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}V]V 3.5248 + + 14 + 1 1.31 33539.3 1.0 6981 5420 12398 HBL1_DMSO_200M_050219_1,12403 HBL1_DMSO_200M_050219_1,12403,VLVEKREL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12404 63.535 46.0 1050400.0 25 0 172200.0 + 36359 SYPLSLHFFS 10 65 599.2981943660944 1196.5818357989888 2 599.2987548708916 MULTI CID FTMS 0 0 0 12398 2188085.5 1.0 0 0.0 6 Unmodified _SYPLSLHFFS_ REV__ENST00000601799.5_1_19:57742659-57743507:+|nuORF 10.823927491677226 0.6659270209832991 3 [C(Carbamidomethyl (C))H]YS{M(Oxidation (M))|F}SRK{I|L} 9 -1 + 44.37 0.0 0.0 3.708 3.708 84.478 0.0 0.0 0.0 32.36295079504531 6.903698325741004 6.903698325741004 44.369545300509486 0 1.2059771852360797 0.0 0.0 0.0 [C(Carbamidomethyl (C))H]YS{M(Oxidation (M))|F}SRK{I|L} 3.708 - 88 + 1 1.31 43473.7 1.0 6982 5420 12398 HBL1_DMSO_200M_050219_1,12404 HBL1_DMSO_200M_050219_1,12404,SYPLSLHFFS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12405 63.536 29.0 1026900.0 25 0 131260.0 -1 0 44 603.9675200152114 1808.8807306458343 3 603.9677001833916 MULTI CID FTMS 0 0 0 12398 1790411.875 0.3912382091486943 -3 0.2632675170898437 7 3 {I|L}Q 2 -1 27.831 0.0 0.0 1.5386 0.0 0.0 1549.7271794757153 0.0 1549.7271794757153 0.0 14.643331241078172 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 {I|L}Q 1.5386 - 23 + 1 1.31 31879.5 1.0 6983 5420 12398 HBL1_DMSO_200M_050219_1,12405 HBL1_DMSO_200M_050219_1,12405, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12406 63.537 19.0 959420.0 25 0 86186.0 + 29961 QSRGKPQV 8 52 450.2566302429895 898.498707552779 2 450.2567932009697 MULTI CID FTMS 0 0 0 12398 1697686.625 0.7703195385669298 4 -0.2090415954589843 8 Unmodified _QSRGKPQV_ REV__ENST00000571654.1_1_16:30666272-30666877:+|nuORF 5.230669730166228 0.792582437072536 3 V 1 -1 12.218 0.0 0.0 1.3599 0.0 0.0 781.4190470686955 0.0 781.4190470686955 0.0 12.21848749616356 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3599 + + 5 + 1 1.31 21040.0 1.0 6984 5420 12398 HBL1_DMSO_200M_050219_1,12406 HBL1_DMSO_200M_050219_1,12406,QSRGKPQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12407 63.538 26.0 1352900.0 25 0 128690.0 + 41312 VPIFELNSI 9 68 516.2930019351217 1030.5714509370432 2 516.2936889529228 MULTI CID FTMS 0 0 0 12398 1589115.0 1.0 0 0.0 9 Unmodified _VPIFELNSI_ REV__ENSG00000134061|ENST00000256447|CD180 24.020572477871973 0.2255576514309169 3 VP{I|L} 3 -1 40.42 0.0 0.0 3.9221 0.0 0.0 0.0 718.3469346974817 718.3469346974817 22.347594070116013 0.0 0.0 0.0 0 0.3252574989159953 1.0969100130080565 0.0 0.0 VP{I|L} 3.9221 + + 50 + 1 1.31 32805.0 1.0 6985 5420 12398 HBL1_DMSO_200M_050219_1,12407 HBL1_DMSO_200M_050219_1,12407,VPIFELNSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12408 63.539 30.0 1396300.0 25 0 170900.0 41538 VPPAAITTL 9 75 441.7680744852922 881.5215960373844 2 441.7682678103447 MULTI CID FTMS 0 0 0 12398 1234266.125 0.6594303688627913 28 -1.8553390502929688 10 Unmodified _VPPAAITTL_ ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;nc|ENSG00000116641|Q96N67-7|DOCK7 16.942295170755138 0.3780752226737986 3 VP 2 7 37.836 0.0 0.0 4.2921 0.0 0.0 0.0 682.3766770437043 682.3766770437043 25.36150500836483 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 0.0 0.0 + VP 4.2921 + + 59 + 1 1.31 41151.3 1.0 6986 5420 12398 HBL1_DMSO_200M_050219_1,12408 HBL1_DMSO_200M_050219_1,12408,VPPAAITTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12409 63.541 95.0 354160.0 25 0 41010.0 29197 QGHRLVGG 8 62 412.23031496903735 822.4460770048747 2 412.2307006716728 MULTI CID FTMS 0 0 0 12398 1062531.375 0.7610018140852263 4 -0.2090415954589843 11 Unmodified _QGHRLVGG_ ENSG00000168056|ENST00000301873|LTBP3;ENST00000525443.1_1_11:65310528-65310994:-|nuORF;nc|ENSG00000168056|Q9NS15-2|LTBP3 0.6903765706972694 0.8201419426409876 3 E 1 8 5.2165 0.0 0.0 0.63427 0.0 0.0 411.2416530320216 279.1453646295532 690.3870176615748 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 E 0.63427 - 1 + 1 1.31 33421.8 1.0 6987 5420 12398 HBL1_DMSO_200M_050219_1,12409 HBL1_DMSO_200M_050219_1,12409,QGHRLVGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12410 63.546 247.0 357030.0 25 0 25307.0 + 24029 LVYQEPIPTA 10 124 565.8071863854657 0 565.8072387576103 PEAK CID FTMS 0 0 0 12398 596950.625 1.0 0 0.0 12 Unmodified _LVYQEPIPTA_ ENSG00000106588|ENST00000223321|PSMA2;ENST00000411875.1_1_7:42961455-42966220:-|nuORF;ENST00000433579.1_1_7:42952135-42964395:-|nuORF 31.26834338654808 0.2038683672476779 3 A{I|L}PE{I|L}VG 7 8 16.419 0.0 0.0 1.4535 0.0 0.0 216.1326437006831 231.07778345279533 447.21042715347846 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}PE{I|L}VG 1.4535 - 714 + 1 1.31 78518.5 1.0 6988 5420 12398 HBL1_DMSO_200M_050219_1,12410 HBL1_DMSO_200M_050219_1,12410,LVYQEPIPTA False True LVYQEPIPTA 63.545921 565.80723875761 4175193.5 12398.0 ENST00000433579.1_1_7:42952135-42964395:-|nuORF;;ENSG00000106588|ENST00000223321|PSMA2;;ENST00000411875.1_1_7:42961455-42966220:-|nuORF 4.900160551071167 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12411 63.551 258.0 432200.0 25 0 27448.0 + 18262 KVIEEEWQQV 10 130 644.332651481185 1286.65075002917 2 644.3333007693291 MULTI CID FTMS 0 0 0 12398 562167.875 0.6521747579038437 -3 0.2632675170898437 13 Unmodified _KVIEEEWQQV_ nc|ENSG00000120802|P42166|TMPO 53.40400417844725 0.0601721406801337 3 [{I|L}A]{I|L}TAEEWQ{[QV]|[N{I|L}]|[RA]|[KV]} 11 4 + 61.528 0.0 0.0 4.782 4.782 81.685 0.0 0.0 0.0 7.604224834232127 7.367585652254185 7.367585652254185 7.604224834232127 0 0.0 0.8239087409443188 2.1307196863200843 0.0 [{I|L}A]{I|L}TAEEWQ{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}ATAEEWQ{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]{I|L}TAEEW[AG]{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]{I|L}TAEE{[DA]|[EG]}Q{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VE[RN]TWQ{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]{I|L}TAG[NS]WQ{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VQ[RD]TWQ{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]{I|L}TQ[NS]WQ{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}ATAEE{[DA]|[EG]}Q{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}ATAEEW[AG]{[QV]|[N{I|L}]|[RA]|[KV]} 4.782;4.191;4.0726;4.0726;3.9351;3.7291;3.6526;3.5641;3.4816;3.4816 -;-;-;-;-;-;-;-;-;- 6471 1 1.31 87292.0 1.0 6989 5420 12398 HBL1_DMSO_200M_050219_1,12411 HBL1_DMSO_200M_050219_1,12411,KVIEEEWQQV True True KVIEEEWQQV 63.550718 644.333300769329 15656076.0 12398.0 nc|ENSG00000120802|P42166|TMPO 4.395056088765462 2.0 True 10.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12412 63.553 97.0 539990.0 25 0 76387.0 + 41901 VQDRFEVNV 9 87 553.2857681718882 1104.5569834105763 2 553.2878906130791 MULTI CID FTMS 0 0 0 12398 515606.875 0.6280771150498048 -1 0.0826683044433593 14 Unmodified _VQDRFEVNV_ ENSG00000123136|ENST00000242776|DDX39A;ENST00000587730.5_1_19:14519750-14520297:-|nuORF;ENST00000588692.5_1_19:14519750-14520718:-|nuORF 26.268140514670165 0.1969607489560049 3 VNV 3 6 29.935 0.0 0.0 2.7101 0.0 0.0 774.3666516002212 0.0 774.3666516002212 0.0 4.802720748257517 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.0 + VNV 2.7101 + + 131 1 1.31 48097.2 1.0 6990 5420 12398 HBL1_DMSO_200M_050219_1,12412 HBL1_DMSO_200M_050219_1,12412,VQDRFEVNV False True VQDRFEVNV 63.552825 553.287890613079 4527107.5 12398.0 ENSG00000123136|ENST00000242776|DDX39A;;ENST00000588692.5_1_19:14519750-14520718:-|nuORF;;ENST00000587730.5_1_19:14519750-14520297:-|nuORF 2.202167828877767 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12413 63.558 282.0 439780.0 25 0 33701.0 + -1 YLSPDLSKV 9 141 509.2747776895272 508.2675012229272 1 511.2840148806572 MULTI CID FTMS 0 0 0 12398 521843.5 0.7453604093141574 -2 0.1872520446777343 15 ENST00000479537.5_1_7:140434399-140447180:-|nuORF;ENSG00000157764|ENST00000646891|BRAF;ENST00000497784.1_2_7:140434399-140508041:-|nuORF;ENST00000445336.2_1_X:74804463-74804925:+|nuORF 3 [Y{I|L}]{M(Oxidation (M))|F} 3 -1 21.043 0.0 0.0 4.1401 0.0 0.0 0.0 82.06703363590077 82.06703363590077 2.0889286263475526 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [Y{I|L}]{M(Oxidation (M))|F} 4.1401 - 132 + 1 1.31 100335.8 1.0 6991 5420 12398 HBL1_DMSO_200M_050219_1,12413 HBL1_DMSO_200M_050219_1,12413, False False YLSPDLSKV 63.558023 509.2712 5364106.0 12398.0 ENST00000479537.5_1_7:140434399-140447180:-|nuORF;;ENSG00000157764|ENST00000646891|BRAF;;ENST00000497784.1_2_7:140434399-140508041:-|nuORF;;ENST00000445336.2_1_X:74804463-74804925:+|nuORF 4.864757378896077 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12414 63.563 266.0 448940.0 25 0 59417.0 + 17412 KMSELQTYV 9 158 549.7779321519453 1097.5413113706904 2 549.7798339724541 MULTI CID FTMS 0 0 0 12398 507037.6875 0.8468929835246043 -1 0.0826683044433593 16 Unmodified _KMSELQTYV_ ENSG00000117724|ENST00000366955|CENPF 32.78568957990786 0.1150597335874693 3 [YT][NP]{I|L}QTYV 9 4 + 55.543 0.0 0.0 5.0607 5.0607 82.158 0.0 0.0 0.0 6.988474775526186 6.988474775526186 6.988474775526186 6.988474775526186 0 0.4247425010840047 1.5228787452803376 0.75 0.3494850021680094 [YT][NP]{I|L}QTYV;Y{M(Oxidation (M))|F}AQ{I|L}[NP]{M(Oxidation (M))|F}V;[YT][NP]{I|L}[AG]TYV;Y{M(Oxidation (M))|F}AQ{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PV;Y{M(Oxidation (M))|F}AQWWVV;{[QV]|[N{I|L}]|[RA]|[KV]}P[YT]QTYV;[NP][YT]{I|L}QTYV;[AG]T[KC]KQTYV;Y{M(Oxidation (M))|F}AQK[DP]MV;Y{M(Oxidation (M))|F}A[AG]{I|L}[NP]{M(Oxidation (M))|F}V 5.0607;4.4239;4.2217;3.9266;3.8337;3.7994;3.787;3.6525;3.6074;3.5849 -;-;-;-;-;-;-;-;-;- 2347 1 1.31 94052.9 1.0 6992 5420 12398 HBL1_DMSO_200M_050219_1,12414 HBL1_DMSO_200M_050219_1,12414,KMSELQTYV True True KMSELQTYV 63.562952 549.779833972454 3296838.75 12398.0 ENSG00000117724|ENST00000366955|CENPF 5.694274584452312 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12415 63.566 145.0 479690.0 25 0 66074.0 + 36415 SYVVGHVL 8 100 437.244698414187 872.474843895174 2 437.2447387576103 MULTI CID FTMS 0 0 0 12398 386653.0625 0.43212193140433 3 -0.1704483032226562 17 Unmodified _SYVVGHVL_ ENSG00000163611|ENST00000295872|SPICE1;ENST00000496105.1_1_3:113169108-113212968:-|nuORF 28.17323086031832 0.4514957916281387 3 GVV[MT] 5 6 22.562 0.0 0.0 2.5859 0.0 0.0 367.222459861525 0.0 367.222459861525 0.0 3.353481135844873 0.0 0.0 0 0.75 0.0 0.0 0.0 GVV[MT] 2.5859 - 113 1 1.31 61284.5 1.0 6993 5420 12398 HBL1_DMSO_200M_050219_1,12415 HBL1_DMSO_200M_050219_1,12415,SYVVGHVL False True SYVVGHVL 63.565846 437.24473875761 14272033.0 12398.0 ENSG00000163611|ENST00000295872|SPICE1;;ENST00000496105.1_1_3:113169108-113212968:-|nuORF 5.5118461449941 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12416 63.573 427.0 532050.0 25 0 48358.0 39456 VAPPPAAA 8 228 347.1988166142556 692.3830802953112 2 347.1989318728447 MULTI CID FTMS 0 0 0 12398 321285.09375 0.2249783558574507 -3 0.2632675170898437 18 Unmodified _VAPPPAAA_ ENSG00000165506|ENST00000298292|DNAAF2;nc|ENSG00000165506|Q9NVR5-2|DNAAF2;REV__ENSG00000144218|ENST00000672756|AFF3;REV__ENST00000252029.7_1_22:50968091-50968476:-|nuORF;REV__nc|ENSG00000144218|P51826-2|AFF3 2.889219685676258 0.8067950007271085 3 [{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]}V{I|L} 6 7 [{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]}V + + 9.5329 -15.453 -2.7531 1.3768 1.3768 48.484 0.0 0.0 0.0 0.0 -3.0300023690138023 -3.0300023690138023 0.0 0 0.0 0.0 0.0 0.0 [{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]}V{I|L} 1.3768 - 39 + 1 1.31 178248.9 1.0 6994 5420 12398 HBL1_DMSO_200M_050219_1,12416 HBL1_DMSO_200M_050219_1,12416,VAPPPAAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12417 63.581 427.0 434110.0 25 0 39203.0 + 41649 VPPSLPSL 8 212 405.24183436984697 808.469115806494 2 405.2422973513603 MULTI CID FTMS 0 0 0 12398 267103.0625 0.686349524337899 -10 0.7407379150390625 19 Unmodified _VPPSLPSL_ REV__ENST00000523812.1_1_8:144357822-144358971:+|nuORF 67.03532852164291 0.116292309877964 3 [{I|L}P]S[VP]SP{I|L} 8 -1 + 43.849 0.0 0.0 5.4238 5.4238 82.315 0.0 0.0 0.0 5.896037294708371 13.55909426325936 5.896037294708371 5.896037294708371 0 0.8494850021680094 1.6989700043360187 0.5 0.0 [{I|L}P]S[VP]SP{I|L};[PS]VP{I|L}SP{I|L};[VP]SP{I|L}SP{I|L};[VP]PS{I|L}SP{I|L};{[TV]|[{I|L}S]}P[VP]SP{I|L};[PS]VP[PS]{I|L}{I|L};[VP]SP[PS]{I|L}{I|L};[VP]PS[PS]{I|L}{I|L};[PS]{I|L}[VP]SP{I|L};[VP]T[VP]SP{I|L} 5.4238;4.6945;4.4352;4.2807;3.5025;3.0986;2.8393;2.6848;2.5363;2.277 -;-;-;-;-;-;-;-;-;- 310 1 1.31 144680.2 1.0 6995 5420 12398 HBL1_DMSO_200M_050219_1,12417 HBL1_DMSO_200M_050219_1,12417,VPPSLPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12418 63.589 371.0 442950.0 25 0 33226.0 3492 CKQLKSKL 8 186 474.29065596515983 0 474.2905761599541 PEAK CID FTMS 0 0 0 12398 272380.875 0.6496720032140033 8 -0.4380416870117187 20 Unmodified _CKQLKSKL_ ENSG00000197822|ENST00000396442|OCLN;ENST00000510666.1_1_5:68840710-68849495:+|nuORF;nc|ENSG00000197822|Q16625-2|OCLN;nc|ENSG00000197822|Q16625-4|OCLN;nc|ENSG00000197822|Q16625-5|OCLN 8.593279151180031 0.5573742999696857 3 TN 2 8 10.969 0.0 0.0 1.1588 0.0 0.0 228.18961147983924 500.26337610416255 728.4529875840018 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TN 1.1588 - 58 + 1 1.31 130319.7 1.0 6996 5420 12398 HBL1_DMSO_200M_050219_1,12418 HBL1_DMSO_200M_050219_1,12418,CKQLKSKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12420 63.593 26.0 3888800.0 25 0 838370.0 + 1360 ALAAALAY 8 95 382.21990709755727 762.4252612619146 2 382.2196533083916 MULTI CID FTMS 0 0 0 12419 4162638.5 0.6284215376333097 -2 0.1471366882324218 1 Unmodified _ALAAALAY_ REV__ENSG00000142661|ENST00000374434|MYOM3;REV__ENST00000475306.1_1_1:24410803-24434643:-|nuORF;REV__nc|ENSG00000142661|Q5VTT5-2|MYOM3 0.7936320650641473 0.8195151834710337 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.284 84512.4 1.0 6997 5421 12419 HBL1_DMSO_200M_050219_1,12420 HBL1_DMSO_200M_050219_1,12420,ALAAALAY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12421 63.599 327.0 571040.0 25 0 70330.0 -1 0 101 905.4467078088138 1808.8788626844275 2 905.9499389529228 MULTI CID FTMS 0 0 0 12419 567739.875 0.6611036129549217 -2 0.1471366882324218 2 3 [H{I|L}]PQVNEEQC(Carbamidomethyl (C)) 10 -1 50.083 0.0 0.0 2.7687 0.0 0.0 0.0 571.3254488580686 571.3254488580686 26.543811591818795 0.0 0.0 0.0 0 0.7887254899964358 1.6989700043360187 0.0 0.7059771852360797 [H{I|L}]PQVNEEQC(Carbamidomethyl (C)) 2.7687 - 2748 + 1 1.284 127481.9 1.0 6998 5421 12419 HBL1_DMSO_200M_050219_1,12421 HBL1_DMSO_200M_050219_1,12421, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12422 63.604 254.0 621400.0 25 0 105820.0 + 39087 TVYTDFDGTRV 11 98 637.3057034614418 1272.5968539896835 2 637.3062011599541 MULTI CID FTMS 0 0 0 12419 747527.8125 0.3057254989811744 -2 0.1471366882324218 3 Unmodified _TVYTDFDGTRV_ ENSG00000137193|ENST00000373509|PIM1;ENSG00000198355|ENST00000360612|PIM3;nc|ENSG00000137193|P11309-2|PIM1 32.89776655970281 0.3218023389984559 3 {[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}DV[WK] 10 4 + 77.976 0.0 0.0 6.1273 6.1273 84.893 0.0 0.0 0.0 20.17983338518107 2.6658935096007497 2.6658935096007497 6.161417394657434 0 0.8494850021680094 2.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}DV[WK];{[TV]|[{I|L}S]}YTDV[KS]D[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}D{[SA]|[TG]}[RV];{[TV]|[{I|L}S]}YVTD[KS]D[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}VD[WK];{[TV]|[{I|L}S]}YTVD[KS]D[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}VYTD[KS]D[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}YTDV{M(Oxidation (M))|F}D[WK];{[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}V[NP]{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}YVTD{M(Oxidation (M))|F}D[WK] 6.1273;5.6432;5.4833;5.4692;5.4633;5.4066;5.3665;5.0874;5.0558;4.9134 -;-;+;-;-;-;-;-;-;- + 1230 + 1 1.284 117910.1 1.0 6999 5421 12419 HBL1_DMSO_200M_050219_1,12422 HBL1_DMSO_200M_050219_1,12422,TVYTDFDGTRV False True TVYTDFDGTRV 63.603691 637.306201159954 25556472.0 12419.0 ENSG00000198355|ENST00000360612|PIM3;;nc|ENSG00000137193|P11309-2|PIM1;;ENSG00000137193|ENST00000373509|PIM1 6.238005002339681 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12423 63.61 326.0 613900.0 25 0 81617.0 + 42045 VQVAKVGP 8 170 399.246626693628 796.478700454056 2 399.2467834353447 MULTI CID FTMS 0 0 0 12419 569613.25 1.0 0 0.0 4 Unmodified _VQVAKVGP_ REV__ENSG00000105229|ENST00000262971|PIAS4 2.302733041254933 0.8103549651115762 3 {I|L} 1 -1 7.993 0.0 0.0 1.0035 0.0 0.0 665.3833920817889 0.0 665.3833920817889 0.0 0.0341971226515269 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0035 - 37 + 1 1.284 156557.5 1.0 7000 5421 12419 HBL1_DMSO_200M_050219_1,12423 HBL1_DMSO_200M_050219_1,12423,VQVAKVGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12424 63.615 293.0 705130.0 25 0 45105.0 + -1 LEGFVRALAC 10 199 568.2991996791862 1134.5838464251724 2 568.2992431521416 MULTI CID FTMS 0 0 0 12419 500255.75 0.0321821995272149 -9 0.6610450744628906 5 Carbamidomethyl (C) _LEGFVRALAC(Carbamidomethyl (C))_ REV__ENSG00000064687|ENST00000263094|ABCA7;REV__ENST00000531478.5_1_19:1064055-1065421:+|nuORF;REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7 13.90604991867851 0.6142120002215601 3 [{I|L}P]{M(Oxidation (M))|F}[WK]TCQ{I|L} 9 -1 + 23.953 0.0 0.0 2.1112 2.1112 73.069 0.0 0.0 0.0 0.7220329455374355 1.0440081885241703 0.7220329455374355 4.771212547196626 0 0.1435078169319297 1.0969100130080565 0.2887254899964357 0.0 [{I|L}P]{M(Oxidation (M))|F}[WK]TCQ{I|L};[{I|L}P]K[W{M(Oxidation (M))|F}]TCQ{I|L};AYQT[WK]K[NP];[{I|L}P]{M(Oxidation (M))|F}[WR]TT{[QS]|[NT]};[QT]K[WK]TCQ{I|L};[AG]TK[WK]TCQ{I|L};[{I|L}P]KT[MT]TCQ{I|L};[{I|L}P]KQT[WH][EP];[{I|L}P]{M(Oxidation (M))|F}[DN]{I|L}{M(Oxidation (M))|F}[RN];[{I|L}P]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}V{M(Oxidation (M))|F}[RN] 2.1112;1.6907;1.6872;1.6786;1.6364;1.6213;1.5216;1.4227;1.2941;1.2941 -;-;-;-;-;-;-;-;-;- 4139 1 1.284 155101.2 1.0 7001 5421 12419 HBL1_DMSO_200M_050219_1,12424 HBL1_DMSO_200M_050219_1,12424,LEGFVRALAC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12425 63.622 422.0 455750.0 25 0 76244.0 -1 0 150 428.2423286184989 427.2350521518989 1 428.2435180544853 MULTI CID FTMS 0 0 0 12419 287440.59375 0.3372234352146786 -9 0.6610450744628906 6 3 {[VA]|[{I|L}G]}AV 4 -1 13.645 0.0 0.0 3.1938 0.0 0.0 0.0 84.00037742949579 84.00037742949579 2.535918783769094 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 {[VA]|[{I|L}G]}AV 3.1938 - 44 1 1.284 150371.3 1.0 7002 5421 12419 HBL1_DMSO_200M_050219_1,12425 HBL1_DMSO_200M_050219_1,12425, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12426 63.629 380.0 485530.0 25 0 136790.0 + 8273 EQLAEKESTLL 11 156 630.8399313625224 1259.6653097918447 2 631.3445922732353 MULTI CID FTMS 0 0 0 12419 263901.25 0.2984323119015647 -6 0.464080810546875 7 Unmodified _EQLAEKESTLL_ REV__ENSG00000144674|ENST00000361924|GOLGA4;REV__ENST00000435830.6_1_3:37336478-37354923:+|nuORF;REV__nc|ENSG00000144674|Q13439-3|GOLGA4;REV__nc|ENSG00000144674|Q13439-4|GOLGA4;REV__nc|ENSG00000144674|Q13439-5|GOLGA4 16.565877749689598 0.6905575015977202 3 {[QN]|[E{I|L}]|[KN]}GAEM[RK]T{I|L}{I|L} 11 -1 + 39.112 0.0 0.0 3.1049 3.1049 68.283 0.0 0.0 0.0 15.05149978319906 4.106829096975275 4.106829096975275 0.6775178426684292 0 0.3539171939081173 1.5228787452803376 0.9876954943324544 0.0 {[QN]|[E{I|L}]|[KN]}GAEM[RK]T{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GAEM[TA]{[NV]|[RG]}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GA[C(Carbamidomethyl (C))R]D{I|L}T{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GAEM{[QG]|[NA]}VT{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F}[PS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GAEM[VS]{I|L}RR;{[QN]|[E{I|L}]|[KN]}QEM[RK]T{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GA[C(Carbamidomethyl (C))R]EVT{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}QEM[TA]{[NV]|[RG]}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GAEM[VS][QA]{I|L}{I|L} 3.1049;3.0511;2.9386;2.8723;2.8201;2.7789;2.744;2.7359;2.6873;2.6724 -;-;-;-;-;-;-;-;-;- 2915 1 1.284 142577.7 1.0 7003 5421 12419 HBL1_DMSO_200M_050219_1,12426 HBL1_DMSO_200M_050219_1,12426,EQLAEKESTLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12427 63.637 414.0 873330.0 25 0 72992.0 + 21124 LPAPLKINL 9 215 489.82208306573744 977.6296131982748 2 489.8242980837822 MULTI CID FTMS 0 0 0 12419 208908.140625 0.4235568800062497 -2 0.1471366882324218 8 Unmodified _LPAPLKINL_ REV__ENSG00000102900|ENST00000308159|NUP93;REV__nc|ENSG00000102900|Q8N1F7-2|NUP93 28.486842064014134 0.1687311288560894 3 [{I|L}A]PP{I|L}{I|L}KN{I|L} 9 -1 + 53.749 0.0 0.0 5.4979 5.4979 79.74 0.0 0.0 0.0 17.343254213956584 3.357921019231938 3.357921019231938 3.357921019231938 0 0.3054621874040891 1.3979400086720375 0.0 0.6694451763165201 [{I|L}A]PP{I|L}{I|L}KN{I|L};[{I|L}A]PP{I|L}{I|L}KQV;[{I|L}A]PP{I|L}{I|L}KVQ;[{I|L}A]P{I|L}{I|L}PKN{I|L};[{I|L}A]PP{I|L}{I|L}KGG{I|L};[{I|L}A]{I|L}{I|L}PPKN{I|L};[{I|L}A]P{I|L}{I|L}PKQV;[{I|L}A]{I|L}{[HG]|PP}{I|L}KN{I|L};[{I|L}A]PP{I|L}{I|L}KGAV;[{I|L}A]{I|L}{I|L}PPKQV 5.4979;5.1544;4.5135;4.1957;4.1154;3.9185;3.8523;3.8193;3.772;3.575 -;-;-;-;-;-;-;-;-;- 5490 + 1 1.284 270042.1 1.0 7004 5421 12419 HBL1_DMSO_200M_050219_1,12427 HBL1_DMSO_200M_050219_1,12427,LPAPLKINL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12428 63.644 424.0 510180.0 25 0 146890.0 -1 0 136 628.1671519931928 3135.799377632964 5 628.3706542849541 MULTI CID FTMS 0 0 0 -1 0 9 3 [HS]S{I|L}T 5 -1 25.075 0.0 0.0 0.79963 0.0 0.0 0.0 2607.5188960257947 2607.5188960257947 3.917301569040525 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.2396518287104437 0.0 [HS]S{I|L}T 0.79963 - 393 1 1.284 159025.4 1.0 7005 5421 12419 HBL1_DMSO_200M_050219_1,12428 HBL1_DMSO_200M_050219_1,12428, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12429 63.652 432.0 236790.0 25 0 8936.0 15559 IPYGTKSQYIL 11 130 641.8567782855739 1281.6990036379475 2 641.4108764529228 MULTI CID FTMS 0 0 0 -1 0 10 Unmodified _IPYGTKSQYIL_ ENSG00000117009|ENST00000366559|KMO;ENST00000481087.1_1_1:241712984-241718974:+|nuORF;nc|ENSG00000117009|O15229-2|KMO;nc|ENSG00000117009|O15229-3|KMO 12.240655878213236 0.7805268987462184 3 {I|L}PS[KP]{I|L}QT{I|L} 9 6 44.436 0.0 0.0 3.467 0.0 0.0 286.0945990040819 0.0 286.0945990040819 0.0 19.09003158234509 0.0 0.0 0 0.0 0.0 1.7145591924310528 0.0 {I|L}PS[KP]{I|L}QT{I|L} 3.467 - 1436 + 1 1.284 81013.3 1.0 7006 5421 12419 HBL1_DMSO_200M_050219_1,12429 HBL1_DMSO_200M_050219_1,12429,IPYGTKSQYIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12431 63.656 15.0 3015300.0 25 0 327770.0 + 32310 RYIANTVEL 9 68 539.797508788246 1077.580464643292 2 539.7982665896416 MULTI CID FTMS 0 0 0 12430 4264780.0 1.0 0 0.0 1 Unmodified _RYIANTVEL_ ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2 32.78568957990786 0.1150597335874693 3 [VP][HV]ANTVE{I|L} 10 4 + 49.896 0.0 0.0 4.6304 4.6304 82.541 0.0 0.0 0.0 1.249387366082999 35.291681396006 1.249387366082999 9.164539485499256 0 0.3252574989159953 0.0 0.4247425010840047 0.0 [VP][HV]ANTVE{I|L};[VP][HV]AGGTVE{I|L};[VP][HV]A[WK]E{I|L} 4.6304;3.7799;2.1693 -;-;- 124 1 1.284 41910.1 1.0 7007 5422 12430 HBL1_DMSO_200M_050219_1,12431 HBL1_DMSO_200M_050219_1,12431,RYIANTVEL True True RYIANTVEL 63.65603 539.798266589642 21336662.0 12430.0 ENSG00000118705|ENST00000237530|RPN2;;nc|ENSG00000118705|P04844-2|RPN2 6.266930262247722 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12432 63.657 19.0 2150200.0 25 0 223490.0 + -1 MPMPLLLV 8 77 465.26459364999903 928.514634366798 2 465.2656127810478 MULTI CID FTMS 0 0 0 12430 1953314.625 0.6488471572457669 2 -0.0815353393554687 2 Oxidation (M) _MPM(Oxidation (M))PLLLV_ REV__ENSG00000186881|ENST00000334726|OR13F1 11.114462752807354 0.7467182956244686 3 MP 2 -1 28.17 0.0 0.0 3.0338 0.0 0.0 0.0 697.3989962213499 697.3989962213499 8.674137952757306 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 MP 3.0338 + + 44 + 1 1.284 38189.5 1.0 7008 5422 12430 HBL1_DMSO_200M_050219_1,12432 HBL1_DMSO_200M_050219_1,12432,MPMPLLLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12433 63.658 6.7 6884900.0 25 0 580620.0 26676 NYISSVSWI 9 90 534.7706123714519 1067.5266718097037 2 534.7735473513603 MULTI CID FTMS 0 0 0 12430 4960502.5 0.6148352526190134 -2 0.1275062561035156 3 Unmodified _NYISSVSWI_ ENSG00000164287|ENST00000381375|CDC20B;nc|ENSG00000164287|Q86Y33-2|CDC20B;nc|ENSG00000164287|Q86Y33-3|CDC20B;nc|ENSG00000164287|Q86Y33-4|CDC20B 28.486842064014134 0.1687311288560894 3 [YN]{I|L}A[TP]Y{[QV]|[N{I|L}]|[RA]|[KV]} 9 5 + 47.654 0.0 0.0 4.464 4.464 73.763 0.0 0.0 0.0 1.856734291156954 1.856734291156954 1.856734291156954 1.856734291156954 0 0.9247425010840048 2.0 0.0 0.3054621874040891 [YN]{I|L}A[TP]Y{[QV]|[N{I|L}]|[RA]|[KV]};[YN]{I|L}E{[SA]|[TG]}KM{I|L};[YN][KQ][SG]QM{I|L};[YN][KQ][SG]{I|L}MQ;[YN]{I|L}[KQ]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[YN]{I|L}[SG][KQ]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]{I|L}[YV][TA]PQ;[YN][KQ][SG]{M(Oxidation (M))|F}PQ;[YN]{I|L}[KQ][TA][KC];[YV]K{[SA]|[TG]}E{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4.464;4.2901;3.201;2.9172;2.8653;2.5953;2.5054;2.4691;2.0313;1.5969 -;-;-;-;-;-;-;-;-;- 377 1 1.284 41851.9 1.0 7009 5422 12430 HBL1_DMSO_200M_050219_1,12433 HBL1_DMSO_200M_050219_1,12433,NYISSVSWI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12434 63.66 11.0 3782500.0 25 0 227450.0 + -1 SPAICSLVAR 10 77 537.2903436613601 1072.56613438952 2 537.2899658083916 MULTI CID FTMS 0 0 0 12430 4171659.0 1.0 0 0.0 4 Carbamidomethyl (C) _SPAIC(Carbamidomethyl (C))SLVAR_ REV__ENSG00000109805|ENST00000251496|NCAPG 9.38312468134398 0.6832340498775793 3 [PG]PVSV 6 -1 16.274 0.0 0.0 1.5173 0.0 0.0 0.0 533.2462822306643 533.2462822306643 3.4472203304856563 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 [PG]PVSV 1.5173 - 78 1 1.284 39944.4 1.0 7010 5422 12430 HBL1_DMSO_200M_050219_1,12434 HBL1_DMSO_200M_050219_1,12434,SPAICSLVAR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12435 63.661 23.0 2071400.0 25 0 258980.0 -1 0 88 434.24358628486095 433.23630981826096 1 434.2433959841728 MULTI CID FTMS 0 0 0 12430 2597764.0 0.6097505816100779 6 -0.3105354309082031 5 3 {[QS]|[NT]}S 3 -1 9.9473 0.0 0.0 2.296 0.0 0.0 0.0 128.09089901187346 128.09089901187346 8.716954623292793 0.0 0.0 0.0 0 0.0 0.0 0.0 0.25 {[QS]|[NT]}S 2.296 - 10 1 1.284 41822.4 1.0 7011 5422 12430 HBL1_DMSO_200M_050219_1,12435 HBL1_DMSO_200M_050219_1,12435, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12436 63.662 34.0 1120200.0 25 0 97637.0 29231 QGSRRLIS 8 78 458.7696166839207 915.5246804346414 2 458.7701599001884 MULTI CID FTMS 0 0 0 12430 1554137.5 0.6322056268238119 5 -0.2482376098632812 6 Unmodified _QGSRRLIS_ ENSG00000002746|ENST00000395891|HECW1;ENST00000471043.1_1_7:43436315-43477745:+|nuORF;ENST00000492310.5_1_7:43153648-43477745:+|nuORF;nc|ENSG00000002746|Q76N89-2|HECW1 7.910154910731844 0.7763180056447161 3 {M(Oxidation (M))|F} 1 8 10.837 0.0 0.0 1.1837 0.0 0.0 750.445195426632 0.0 750.445195426632 0.0 0.2415233978727737 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1837 - 20 + 1 1.284 37708.0 1.0 7012 5422 12430 HBL1_DMSO_200M_050219_1,12436 HBL1_DMSO_200M_050219_1,12436,QGSRRLIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12437 63.664 79.0 957090.0 25 0 98740.0 + 38964 TVPKPDVVVQV 11 79 590.8506155002312 1179.6866780672624 2 590.8508178591728 MULTI CID FTMS 0 0 0 12430 1474817.625 1.0 0 0.0 7 Unmodified _TVPKPDVVVQV_ ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1 42.312485326615175 0.1767732348921932 3 VEVVGAVVVQV 11 6 40.162 0.0 0.0 3.4045 0.0 0.0 83.037889549025 0.0 83.037889549025 0.0 12.397551838059291 0.0 0.0 0 0.9419628234359578 0.0 0.0 0.0 VEVVGAVVVQV 3.4045 - 973 1 1.284 65670.5 1.0 7013 5422 12430 HBL1_DMSO_200M_050219_1,12437 HBL1_DMSO_200M_050219_1,12437,TVPKPDVVVQV False True TVPKPDVVVQV 63.663747 590.850817859173 15543149.0 12430.0 nc|ENSG00000067177|P46020-2|PHKA1;;ENSG00000067177|ENST00000373542|PHKA1;;nc|ENSG00000067177|P46020-3|PHKA1 4.593013366063436 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12438 63.665 68.0 1331900.0 25 0 163090.0 + 41619 VPPPLAKAI 9 89 453.29442015475456 904.5742873763091 2 453.2941467165947 MULTI CID FTMS 0 0 0 12430 1360197.25 0.4956763069015831 5 -0.2482376098632812 8 Unmodified _VPPPLAKAI_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;ENST00000588913.5_1_19:10244345-10246231:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 48.345845343767074 0.0439967357579942 3 VPPP{I|L}AKA{I|L} 9 0 + 69.885 0.0 0.0 7.7257 7.7257 96.792 0.0 0.0 0.0 40.12553968976347 10.846755565910442 10.846755565910442 49.35316740696797 0 0.7134679910804405 2.0 0.0 0.0 + + VPPP{I|L}AKA{I|L};V[YK]{I|L}AKA{I|L} 7.7257;2.2698 +;- + 324 + 1 1.284 76552.3 1.0 7014 5422 12430 HBL1_DMSO_200M_050219_1,12438 HBL1_DMSO_200M_050219_1,12438,VPPPLAKAI True True VPPPLAKAI 63.66537 453.294146716595 297704112.0 12430.0 ENST00000586588.5_1_19:10244345-10254710:-|nuORF;;ENST00000588913.5_1_19:10244345-10246231:-|nuORF;;ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 5.025281588236491 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12439 63.667 34.0 1870000.0 25 0 97643.0 + + 38002 SQTDLVSRL 9 97 509.2715176128346 1016.5284822924692 2 509.7783691287041 MULTI CID FTMS 0 0 0 12430 1269958.25 0.075403606619633 -14 1.0173568725585938 9 Unmodified _TNTQPTSIR_ ENSG00000175274|ENST00000525680|TP53I11 13.042465956692816 0.4836390050082244 3 [WE]D{I|L}VSR{I|L} 8 -1 + 31.556 0.0 0.0 3.1043 3.1043 82.721 0.0 0.0 0.0 9.989155222785406 7.365088997497722 7.365088997497722 31.55597387647393 0 0.0 0.0 0.0 0.0 [WE]D{I|L}VSR{I|L} 3.1043 - 117 + 1 1.284 51774.4 1.0 7015 5422 12430 HBL1_DMSO_200M_050219_1,12439 HBL1_DMSO_200M_050219_1,12439,TNTQPTSIR False False SQTDLVSRL 63.666549 509.778369128704 8118242.5 12430.0 ENSG00000175274|ENST00000525680|TP53I11 4.816552797953288 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12440 63.668 40.0 882860.0 25 0 110820.0 + -1 ILFLGDMPL 9 71 345.5234536837916 1033.5485316515749 3 345.5234863162041 MULTI CID FTMS 0 0 0 12430 1113164.25 1.0 0 0.0 10 Oxidation (M) _ILFLGDM(Oxidation (M))PL_ REV__ENSG00000079112|ENST00000027335|CDH17 4.897010918128616 0.7437319958283661 3 {I|L}{I|L} 2 -1 20.969 0.0 0.0 2.0288 0.0 0.0 0.0 804.3580838129402 804.3580838129402 13.979400086720377 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 2.0288 + + 3 + 1 1.284 35104.2 1.0 7016 5422 12430 HBL1_DMSO_200M_050219_1,12440 HBL1_DMSO_200M_050219_1,12440,ILFLGDMPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12441 63.669 75.0 1539300.0 25 0 169450.0 + 14707 IIYPTPKVV 9 140 515.3206339553435 1028.626714977487 2 515.3209716677666 MULTI CID FTMS 0 0 0 12430 1075256.25 1.0 0 0.0 11 Unmodified _IIYPTPKVV_ ENSG00000180773|ENST00000326402|SLC36A4;ENST00000527503.1_1_11:92881705-92887463:-|nuORF;nc|ENSG00000180773|Q6YBV0-2|SLC36A4 41.95555342248728 0.0647214845423414 3 {I|L}{I|L}YPT 5 4 54.894 0.0 0.0 5.3367 0.0 0.0 0.0 438.2728990801262 438.2728990801262 26.13241736629069 0.0 0.0 0.0 0 0.75 2.0 0.9947026752325154 0.0 + {I|L}{I|L}YPT 5.3367 + + 1270 + 1 1.284 93831.3 1.0 7017 5422 12430 HBL1_DMSO_200M_050219_1,12441 HBL1_DMSO_200M_050219_1,12441,IIYPTPKVV True True IIYPTPKVV 63.669478 515.320971667767 10835678.0 12430.0 nc|ENSG00000180773|Q6YBV0-2|SLC36A4;;ENST00000527503.1_1_11:92881705-92887463:-|nuORF;;ENSG00000180773|ENST00000326402|SLC36A4 2.996770540873209 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12442 63.671 44.0 1351400.0 25 0 250420.0 -1 RLCRAHPTL 9 72 562.312266810649 0 562.3115112185478 PEAK CID FTMS 0 0 0 12430 1108687.875 0.8518394376123264 -1 0.0630378723144531 12 Carbamidomethyl (C) _RLC(Carbamidomethyl (C))RAHPTL_ ENSG00000162390|ENST00000343744|ACOT11;ENST00000479837.1_1_1:55062957-55065089:+|nuORF;nc|ENSG00000162390|Q8WXI4|ACOT11 12.531546534597751 0.2832320739326029 3 {I|L}D 2 -1 6.0577 0.0 0.0 0.53961 0.0 0.0 811.4246107342932 80.05142389468983 891.476034628983 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1989700043360188 0.0 {I|L}D 0.53961 - 33 + 1 1.284 52731.0 1.0 7018 5422 12430 HBL1_DMSO_200M_050219_1,12442 HBL1_DMSO_200M_050219_1,12442,RLCRAHPTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12443 63.675 241.0 543350.0 25 0 41389.0 + 32073 RVLPPSALQSV 11 112 583.8481402842426 1165.6817276352851 2 583.8481323122978 MULTI CID FTMS 0 0 0 12430 803242.125 1.0 0 0.0 13 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 88.36371040165146 0.0014365852967226 3 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 71.291 0.0 0.0 6.1158 6.1158 87.311 0.0 0.0 0.0 4.981979378655879 44.32313267038286 4.981979378655879 9.128498242811006 0 1.2302046884880935 0.0 1.2302046884880935 0.4247425010840047 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[{I|L}A]GT[K{I|L}]H{I|L}QSV;[Q{I|L}]T[K{I|L}]H{I|L}QSV;[VS][VG][K{I|L}]H{I|L}QSV;[{I|L}A]GT[K{I|L}]H{I|L}[AG]SV;[{I|L}T]Q[K{I|L}]H{I|L}QSV;[Q{I|L}]T[K{I|L}]H{I|L}[AG]SV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[{I|L}T]Q[K{I|L}]H{I|L}[AG]SV 6.1158;5.3327;4.8;4.6072;4.4733;4.0169;3.9396;3.821;3.5777;3.1534 +;-;-;-;-;-;-;-;-;- + 517 1 1.284 103365.0 1.0 7019 5422 12430 HBL1_DMSO_200M_050219_1,12443 HBL1_DMSO_200M_050219_1,12443,RVLPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12444 63.678 145.0 1399400.0 25 0 181970.0 + 44590 YPFKPPKI 8 148 330.5321852651292 988.5747263955876 3 330.5318786501884 MULTI CID FTMS 0 0 0 12430 791064.625 0.04522395835894 -30 2.489208221435547 14 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 15.847184025352805 0.6768015514314958 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 42.459 0.0 0.0 4.2949 4.2949 79.323 0.0 0.0 0.0 13.58481823291011 3.496670791391523 3.496670791391523 6.575773191777934 0 0.0 1.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};YP{M(Oxidation (M))|F}KP{I|L}KP;YP{M(Oxidation (M))|F}K{I|L}PKP;Y{I|L}MKPPK{I|L};YP{M(Oxidation (M))|F}{I|L}KPKP;Y{I|L}MKP{I|L}KP;Y{I|L}MK{I|L}PKP;Y{I|L}M{I|L}KPKP;{[VA]|[{I|L}G]}{[VA]|[{I|L}G]}{I|L}K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 4.2949;3.6298;3.5194;3.4615;2.8123;2.7963;2.6859;1.9789;0.14327 +;-;-;-;-;-;-;-;- + 280 + 1 1.284 163625.0 1.0 7020 5422 12430 HBL1_DMSO_200M_050219_1,12444 HBL1_DMSO_200M_050219_1,12444,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12445 63.68 95.0 1181000.0 25 0 67140.0 + 3528 CVEVTDLGFG 10 146 520.2408031192657 1038.467053305331 2 520.2411376833916 MULTI CID FTMS 0 0 0 12430 706957.4375 0.7914908353110133 -1 0.0630378723144531 15 Unmodified _CVEVTDLGFG_ REV__ENSG00000027644|ENST00000368195|INSRR 15.847184025352805 0.5816416552707754 3 [PS]GV{I|L}DCVSY 10 -1 [PS]GV{I|L}DCV + + 24.024 9.502 1.2334 2.3134 2.3134 49.134 0.0 0.0 0.0 0.0 5.179381089317516 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 [PS]GV{I|L}DCVSY 2.3134 - 741 + 1 1.284 89868.1 1.0 7021 5422 12430 HBL1_DMSO_200M_050219_1,12445 HBL1_DMSO_200M_050219_1,12445,CVEVTDLGFG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12446 63.686 302.0 743080.0 25 0 62820.0 + 18395 KVVDIIKLPA 10 204 548.3601681316346 1094.7057833300692 2 548.3597289919853 MULTI CID FTMS 0 0 0 12430 467556.125 0.6960885080091747 -5 0.3907737731933594 16 Unmodified _KVVDIIKLPA_ REV__ENSG00000084754|ENST00000380649|HADHA;REV__ENST00000471743.1_1_2:26435372-26437931:-|nuORF;REV__ENST00000540341.1_1_12:8787398-8787947:+|nuORF 6.2057823575117 0.6979311171683138 3 H{I|L}Y{I|L}NH{I|L} 7 -1 53.805 0.0 0.0 4.915 0.0 0.0 186.21528719520728 0.0 186.21528719520728 0.0 26.02777151476099 0.0 0.0 0 0.0 0.0 0.0 1.8098943791441968 H{I|L}Y{I|L}NH{I|L} 4.915 - 3463 + 1 1.284 169224.8 1.0 7022 5422 12430 HBL1_DMSO_200M_050219_1,12446 HBL1_DMSO_200M_050219_1,12446,KVVDIIKLPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12447 63.688 132.0 909030.0 25 0 96405.0 -1 QTLRKAMK 8 139 496.29032196381297 0 496.2922241091728 PEAK CID FTMS 0 0 0 12430 340084.09375 0.8665043062895842 -1 0.0630378723144531 17 Oxidation (M) _QTLRKAM(Oxidation (M))K_ ENSG00000196975|ENST00000394295|ANXA4;nc|ENSG00000196975|P09525|ANXA4 23.1484247019978 0.3584660196589264 3 PN 2 -1 15.182 0.0 0.0 1.5327 0.0 0.0 648.3754924546284 128.0721377008422 776.4476301554706 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.7134679910804405 PN 1.5327 - 251 + 1 1.284 94170.4 1.0 7023 5422 12430 HBL1_DMSO_200M_050219_1,12447 HBL1_DMSO_200M_050219_1,12447,QTLRKAMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12448 63.695 361.0 265290.0 25 0 14252.0 + 9394 FISNIWYLAI 10 119 620.3403139145761 0 620.0112792849541 PEAK CID FTMS 0 0 0 12430 244255.65625 0.7573668352518191 -1 0.0630378723144531 18 Unmodified _FISNIWYLAI_ REV__ENSG00000136546|ENST00000643258|SCN7A;REV__ENST00000424326.5_1_2:167262092-167297919:-|nuORF 36.12702656103203 0.1519005573994188 3 SQ{I|L}R 4 -1 18.532 0.0 0.0 1.4961 0.0 0.0 189.05881937976943 562.3106173150999 751.3694366948694 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 SQ{I|L}R 1.4961 - 402 + 1 1.284 75304.5 1.0 7024 5422 12430 HBL1_DMSO_200M_050219_1,12448 HBL1_DMSO_200M_050219_1,12448,FISNIWYLAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12450 63.705 368.0 422050.0 25 0 29085.0 36992 TFLMDLSITY 10 155 401.8705817597911 1202.5899158795733 3 401.8707763552666 MULTI CID FTMS 0 0 0 12449 126434.71875 0.1731789994570808 3 -0.1508026123046875 1 Unmodified _TFLMDLSITY_ ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08|DNAH12 13.90604991867851 0.6142120002215601 3 T{M(Oxidation (M))|F}MWT[RK]AY 9 6 + 40.842 0.0 0.0 3.3962 3.3962 81.868 0.0 0.0 0.0 28.07762195084189 3.006076677365499 3.006076677365499 14.501261862737618 0 0.2887254899964357 0.0 0.0 0.3252574989159953 T{M(Oxidation (M))|F}MWT[RK]AY;T{M(Oxidation (M))|F}MWY{I|L}{I|L}MV;T{M(Oxidation (M))|F}MWY{I|L}{I|L}VM;T{M(Oxidation (M))|F}MYW{I|L}{I|L}MV;T{M(Oxidation (M))|F}MYW{I|L}{I|L}VM;T{M(Oxidation (M))|F}YMW{I|L}{I|L}MV;T{M(Oxidation (M))|F}YMW{I|L}{I|L}VM 3.3962;2.1903;2.1478;1.7936;1.751;1.2124;1.1698 -;-;-;-;-;-;- 348 + 1 1.245 119163.5 1.0 7025 5423 12449 HBL1_DMSO_200M_050219_1,12450 HBL1_DMSO_200M_050219_1,12450,TFLMDLSITY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12451 63.706 61.0 1172800.0 25 0 110620.0 + 4179 DAPIVAHL 8 85 418.23718703814194 834.4598211430839 2 418.2375671267509 MULTI CID FTMS 0 0 0 12449 1114957.625 0.111676063504528 -5 0.3577003479003906 2 Unmodified _DAPIVAHL_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 45.7499826716795 0.1592378023510922 3 {[DA]|[EG]}P{I|L}VAH{I|L} 8 0 + 65.412 0.0 0.0 7.8389 7.8389 97.342 0.0 0.0 0.0 20.79812217439504 11.8943306386236 11.8943306386236 65.41238483632647 0 0.6307196863200843 2.0 0.0 0.0 + + {[DA]|[EG]}P{I|L}VAH{I|L} 7.8389 + + 96 + 1 1.245 60036.0 1.0 7026 5423 12449 HBL1_DMSO_200M_050219_1,12451 HBL1_DMSO_200M_050219_1,12451,DAPIVAHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12452 63.71 184.0 1017200.0 25 0 46419.0 + 24900 MPNTRPPII 9 170 519.791667430783 1037.568781928366 2 519.7930786013603 MULTI CID FTMS 0 0 0 12449 1032832.4375 0.0949542029061987 18 -1.0341720581054688 3 Unmodified _MPNTRPPII_ ENSG00000084774|ENST00000264705|CAD 38.61474834105838 0.0830609365873449 3 MPNTR 5 4 59.697 0.0 0.0 5.7536 0.0 0.0 0.0 435.2618720054659 435.2618720054659 34.58895207447803 0.0 0.0 0.0 0 0.5941876774005249 1.154901959985743 0.0 0.4247425010840047 + MPNTR 5.7536 + + 2524 + 1 1.245 150114.9 1.0 7027 5423 12449 HBL1_DMSO_200M_050219_1,12452 HBL1_DMSO_200M_050219_1,12452,MPNTRPPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12453 63.712 80.0 654730.0 25 0 88525.0 + 14353 IETRRPAP 8 83 470.2722316846463 938.5299104360926 2 470.2718994021416 MULTI CID FTMS 0 0 0 12449 973839.5 1.0 0 0.0 4 Unmodified _IETRRPAP_ REV__ENSG00000184640|ENST00000427177|SEPTIN9;REV__nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;REV__nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;REV__nc|ENSG00000184640|Q9UHD8-7|SEPTIN9 9.347437153973935 0.7675937258251505 3 [VS]AER{I|L}[HK] 8 -1 + 24.844 0.0 0.0 2.6471 2.6471 68.743 0.0 0.0 0.0 1.49411293427114 1.49411293427114 1.49411293427114 1.49411293427114 0 0.0 0.0 0.75 0.0 [VS]AER{I|L}[HK];M[{I|L}P]K[VS]P[PA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ER{I|L}[HK];[VS]P{[SA]|[TG]}T{I|L}[HK];[VS]AE[VG]{I|L}[HK];[VS]AEK{I|L}[RH];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E[VG]{I|L}[HK];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EK{I|L}[RH];[VS]A[PS]T{I|L}[HK];[{I|L}T][DG]R{I|L}[HK] 2.6471;2.488;2.2849;1.6962;1.6603;1.5531;1.2908;1.1909;1.0806;0.94421 -;-;-;-;-;-;-;-;-;- 257 1 1.245 47066.5 1.0 7028 5423 12449 HBL1_DMSO_200M_050219_1,12453 HBL1_DMSO_200M_050219_1,12453,IETRRPAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12454 63.713 77.0 980530.0 25 0 93941.0 + 9595 RLPPGFNDV 9 110 507.2914090498513 1012.5682651665028 2 507.2910644412041 MULTI CID FTMS 0 0 0 12449 631874.5 0.8806195943328121 1 -0.0385932922363281 5 Unmodified _FLKVVHGDV_ nc|ENSG00000161847|Q8IY67|RAVER1;ENSG00000161847|ENST00000617231|RAVER1;ENST00000592208.5_1_19:10433104-10439782:-|nuORF;nc|ENSG00000161847|Q8IY67-2|RAVER1 15.847184025352805 0.4077185912009129 3 EP{[QN]|[E{I|L}]|[KN]} 4 8 19.693 0.0 0.0 1.9448 0.0 0.0 526.3237303633497 0.0 526.3237303633497 0.0 -9.127262061223156 -9.127262061223156 0.0 0 0.3494850021680094 0.0 0.0 0.0 EP{[QN]|[E{I|L}]|[KN]} 1.9448 - 123 1 1.245 64687.3 1.0 7029 5423 12449 HBL1_DMSO_200M_050219_1,12454 HBL1_DMSO_200M_050219_1,12454,FLKVVHGDV False False RLPPGFNDV 63.713328 507.291064441204 5656889.0 12449.0 nc|ENSG00000161847|Q8IY67|RAVER1;;ENSG00000161847|ENST00000617231|RAVER1;;ENST00000592208.5_1_19:10433104-10439782:-|nuORF;;nc|ENSG00000161847|Q8IY67-2|RAVER1 4.62685759862264 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12455 63.718 235.0 576770.0 25 0 71464.0 + 5208 DIVFTSYEEQ 10 122 615.7794813083536 1229.5444096835072 2 615.7800170779228 MULTI CID FTMS 0 0 0 12449 573340.75 1.0 0 0.0 6 Unmodified _DIVFTSYEEQ_ REV__ENSG00000185989|ENST00000334062|RASA3;REV__nc|ENSG00000185989|Q14644-2|RASA3 19.256988751693697 0.5244284437930726 3 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}G{M(Oxidation (M))|F}D{I|L}{I|L} 9 -1 67.119 0.0 0.0 5.4589 0.0 0.0 0.0 241.019999411231 241.019999411231 34.38424994129406 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.1791746928241127 0.0 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}G{M(Oxidation (M))|F}D{I|L}{I|L} 5.4589 - 2552 1 1.245 102318.3 1.0 7030 5423 12449 HBL1_DMSO_200M_050219_1,12455 HBL1_DMSO_200M_050219_1,12455,DIVFTSYEEQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12456 63.722 228.0 709610.0 25 0 51065.0 + 3766 DAHIYLNHI 9 190 548.2831665655891 1094.551780197978 2 548.7845336794853 MULTI CID FTMS 0 0 0 12449 561846.8125 0.5781698481967528 -3 0.1704483032226562 7 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 43.9818466556824 0.0535980856389242 3 {[QG]|[NA]}PGPY{I|L}NH{I|L} 10 4 + 33.184 0.0 0.0 3.0317 3.0317 69.512 0.0 0.0 0.0 1.5386354071888029 3.719778296232682 1.5386354071888029 1.5386354071888029 0 1.8781446971601312 1.154901959985743 0.0 0.0 {[QG]|[NA]}PGPY{I|L}NH{I|L};{[DA]|[EG]}H{I|L}Y{I|L}NH{I|L};[H{I|L}]DAY{I|L}NH{I|L};{[QG]|[NA]}[PG]PY{I|L}NH{I|L};{[QG]|[NA]}PGPY{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};[HA]D{I|L}Y{I|L}NH{I|L};{[DA]|[EG]}H{I|L}Y{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};[H{I|L}]DAY{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};{[QG]|[NA]}PGPYVQH{I|L};{[QG]|[NA]}PGPY{I|L}GGH{I|L} 3.0317;2.8912;2.8688;2.6919;2.6215;2.5287;2.481;2.4587;2.2428;2.1944 -;+;-;-;-;-;-;-;-;- + 2587 1 1.245 124094.7 1.0 7031 5423 12449 HBL1_DMSO_200M_050219_1,12456 HBL1_DMSO_200M_050219_1,12456,DAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12457 63.728 300.0 438050.0 25 0 76644.0 + 2067 APLVPVPAV 9 130 431.772952959359 861.531352985518 2 431.7722350955009 MULTI CID FTMS 0 0 0 12449 500614.3125 1.0 0 0.0 8 Unmodified _APLVPVPAV_ REV__ENST00000579692.1_1_17:29335655-29349061:+|nuORF;REV__ENST00000580190.5_1_17:29335655-29372465:+|nuORF 5.230669730166228 0.7320841359114558 3 {I|L}[PA]V 4 -1 12.307 0.0 0.0 1.4285 0.0 0.0 463.2926808087906 0.0 463.2926808087906 0.0 0.0886438348021556 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}[PA]V 1.4285 - 33 1 1.245 105763.1 1.0 7032 5423 12449 HBL1_DMSO_200M_050219_1,12457 HBL1_DMSO_200M_050219_1,12457,APLVPVPAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12458 63.734 330.0 502020.0 25 0 54798.0 -1 0 157 385.21991919537055 384.21264272877056 1 385.2211181521416 MULTI CID FTMS 0 0 0 12449 380250.625 0.3021066891693738 -6 0.4337158203125 9 3 {I|L} 1 -1 13.099 0.0 0.0 3.4093 0.0 0.0 253.11754797955024 0.0 253.11754797955024 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.4093 - 39 + 1 1.245 138170.5 1.0 7033 5423 12449 HBL1_DMSO_200M_050219_1,12458 HBL1_DMSO_200M_050219_1,12458, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12460 63.738 3.2 8549700.0 25 0 843830.0 -1 TLCEKAFNQ 9 48 555.766591608785 1109.51863028437 2 555.7678710818291 MULTI CID FTMS 0 0 0 12459 12314808.0 0.5010377318418898 2 -0.1122093200683593 1 Carbamidomethyl (C) _TLC(Carbamidomethyl (C))EKAFNQ_ ENSG00000130856|ENST00000320610|ZNF236;ENST00000543926.6_1_18:74647944-74680292:+|nuORF;nc|ENSG00000130856|Q9UL36|ZNF236 4.75600775471527 0.7486543447549536 3 T{I|L} 2 -1 14.949 0.0 0.0 1.3473 0.0 0.0 877.3756687138606 0.0 877.3756687138606 0.0 3.711375162600703 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L} 1.3473 + + 13 + 1 1.245 26981.8 1.0 7034 5424 12459 HBL1_DMSO_200M_050219_1,12460 HBL1_DMSO_200M_050219_1,12460,TLCEKAFNQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12461 63.739 4.6 9766000.0 25 0 3406100.0 + 39336 VAFSGTARPLT 11 51 560.3110074710612 1118.6074620089223 2 560.3114501833916 MULTI CID FTMS 0 0 0 12459 13623986.0 0.7572165748342392 1 -0.0394744873046875 2 Unmodified _VAFSGTARPLT_ REV__ENST00000550219.1_1_9:131710355-131710682:+|nuORF 9.38312468134398 0.8308777417566128 3 [TP]{I|L} 3 -1 24.181 0.0 0.0 2.1617 0.0 0.0 0.0 804.3998348047627 804.3998348047627 2.1813434445604685 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [TP]{I|L} 2.1617 - 21 1 1.245 44298.4 1.0 7035 5424 12459 HBL1_DMSO_200M_050219_1,12461 HBL1_DMSO_200M_050219_1,12461,VAFSGTARPLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12462 63.74 11.0 2894200.0 25 0 339720.0 + 930 AFIDQSQSL 9 58 504.7529094998892 1007.4912660665784 2 504.7527953982353 MULTI CID FTMS 0 0 0 12459 4773629.5 0.1156307928886436 6 -0.3348350524902344 3 Unmodified _AFIDQSQSL_ ENSG00000167325|ENST00000300738|RRM1 18.13498045792455 0.3457906370836843 3 S{I|L} 2 7 18.85 0.0 0.0 1.871 0.0 0.0 789.3640820839597 0.0 789.3640820839597 0.0 6.631680986061717 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 + S{I|L} 1.871 + + 41 + 1 1.245 31081.1 1.0 7036 5424 12459 HBL1_DMSO_200M_050219_1,12462 HBL1_DMSO_200M_050219_1,12462,AFIDQSQSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12463 63.741 13.0 2293400.0 25 0 138920.0 + 20843 LMDHTIPEV 9 68 527.7673082314394 0 527.7670776247978 PEAK CID FTMS 0 0 0 12459 3722386.75 0.8416290296123381 1 -0.0394744873046875 4 Unmodified _LMDHTIPEV_ ENSG00000137575|ENST00000260130|SDCBP;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP 28.486842064014134 0.1241350795510704 3 {I|L} 1 8 11.99 0.0 0.0 1.1381 0.0 0.0 343.1744494366039 594.2364467914065 937.4108962280104 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L} 1.1381 + + 13 + 1 1.245 32655.2 1.0 7037 5424 12459 HBL1_DMSO_200M_050219_1,12463 HBL1_DMSO_200M_050219_1,12463,LMDHTIPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12464 63.742 30.0 1572100.0 25 0 297220.0 + 15026 ILTDITKGV 9 78 480.2923522180862 958.5701515029724 2 480.2929565310478 MULTI CID FTMS 0 0 0 12459 1257232.0 0.1619508318092862 4 -0.2290000915527343 5 Unmodified _ILTDITKGV_ ENSG00000167658|ENST00000309311|EEF2 21.53697664764585 0.2571576504437394 3 {I|L}{I|L}TD{I|L}TKGV 9 0 + 51.832 0.0 0.0 5.4072 5.4072 74.873 0.0 0.0 0.0 27.147642715192504 0.6507297828679626 0.6507297828679626 0.6507297828679626 0 0.3807196863200844 2.0 0.0 0.0 + + {I|L}{I|L}TD{I|L}TKGV;{I|L}{I|L}TD{I|L}[KG]S{I|L};{I|L}{I|L}TD{I|L}[KG]TV;{I|L}{I|L}[RP][HQ]PV 5.4072;5.3393;4.6334;1.5413 +;-;-;- + 146 + 1 1.245 43000.6 1.0 7038 5424 12459 HBL1_DMSO_200M_050219_1,12464 HBL1_DMSO_200M_050219_1,12464,ILTDITKGV False True ILTDITKGV 63.742282 480.292956531048 89163488.0 12459.0 ENSG00000167658|ENST00000309311|EEF2 4.776642719904582 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12465 63.744 75.0 862240.0 25 0 140770.0 + 12087 GQGRGILVN 9 104 457.2640638459234 912.5135747586468 2 457.2643920779228 MULTI CID FTMS 0 0 0 12459 1143391.75 0.630593114219856 12 -0.6020469665527344 6 Unmodified _GQGRGILVN_ REV__ENSG00000134321|ENST00000382040|RSAD2 4.3292370932331545 0.7635526921153418 3 [PG]K[RH]GYV 8 -1 [PG]K[RH]GY + + 10.969 -4.3482 -0.54665 1.2021 1.2021 48.42 0.0 0.0 0.0 0.0 -15.228787452803374 -15.228787452803374 0.0 0 0.0 0.0 0.0 0.0 [PG]K[RH]GYV 1.2021 - 42 + 1 1.245 52474.2 1.0 7039 5424 12459 HBL1_DMSO_200M_050219_1,12465 HBL1_DMSO_200M_050219_1,12465,GQGRGILVN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12466 63.748 214.0 532660.0 25 0 35254.0 + 26630 NVVMVNQGL 9 143 487.2601985565441 972.5058441798882 2 487.2610961794853 MULTI CID FTMS 0 0 0 12459 826742.0625 0.5189891103049205 3 -0.1667022705078125 7 Unmodified _NVVMVNQGL_ ENSG00000134057|ENST00000256442|CCNB1 46.020951573049366 0.0490941689151868 3 [QA]{I|L}MVNV[QA] 9 6 + 49.266 0.0 0.0 5.0659 5.0659 83.168 0.0 0.0 0.0 8.330828924534217 4.137342758552691 4.137342758552691 8.330828924534217 0 1.1307196863200843 0.3979400086720376 0.0 0.2887254899964357 [QA]{I|L}MVNV[QA];{[NV]|[RG]}VMVNV[QA];[QA]{I|L}MVGGV[QA];{[VA]|[{I|L}G]}AAMVNV[QA];[QA]{I|L}C(Carbamidomethyl (C))A{I|L}V[QA];[QA]{I|L}M[{I|L}T]P{[CP]|[EA]};[Q{I|L}]AMVNV[QA];{[NV]|[RG]}VMVGGV[QA];{[VA]|[{I|L}G]}AAMVGGV[QA];VVNMVNV[QA] 5.0659;4.2093;4.1191;4.0753;3.5529;3.4225;3.3854;3.2624;3.133;2.9762 -;-;-;-;-;-;-;-;-;- 1405 1 1.245 89575.4 1.0 7040 5424 12459 HBL1_DMSO_200M_050219_1,12466 HBL1_DMSO_200M_050219_1,12466,NVVMVNQGL True True NVVMVNQGL 63.748065 487.261096179485 13687953.0 12459.0 ENSG00000134057|ENST00000256442|CCNB1 6.046226978302002 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12467 63.753 279.0 558920.0 25 0 44177.0 + 41524 VPNPRIKLI 9 155 350.5660018420345 1048.6761761263035 3 350.5656616091728 MULTI CID FTMS 0 0 0 12459 630941.0 0.4974424847328628 -4 0.2090415954589843 8 Unmodified _VPNPRIKLI_ ENSG00000167657|ENST00000545797|DAPK3;nc|ENSG00000167657|O43293-2|DAPK3 30.22481116460888 0.1466181017706357 3 VPN{I|L} 4 5 40.138 0.0 0.0 3.8275 0.0 0.0 0.0 622.4060152643186 622.4060152643186 10.05317734689662 0.0 0.0 0.0 0 0.1505149978319906 0.6020599913279624 0.0 0.6694451763165201 VPN{I|L} 3.8275 - 492 + 1 1.245 145415.5 1.0 7041 5424 12459 HBL1_DMSO_200M_050219_1,12467 HBL1_DMSO_200M_050219_1,12467,VPNPRIKLI False True VPNPRIKLI 63.753197 350.565661609173 8458464.0 12459.0 nc|ENSG00000167657|O43293-2|DAPK3;;ENSG00000167657|ENST00000545797|DAPK3 2.936917225519816 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12468 63.758 237.0 267940.0 25 0 9485.2 27890 PLSLVLYPFPL 11 114 629.878642032613 1257.742731132026 2 629.8790161013603 MULTI CID FTMS 0 0 0 12459 612865.25 0.479527338725681 -2 0.0815353393554687 9 Unmodified _PLSLVLYPFPL_ ENST00000366663.9_1_1:230974722-230974869:-|nuORF 18.1463463914782 0.6576820063886638 3 {NN|[MP]|[D{I|L}]|[EV]}D{[ET]|[MV]}{I|L}D{I|L}T{I|L} 10 7 31.916 0.0 0.0 2.5376 0.0 0.0 0.0 126.15335059907592 126.15335059907592 9.4812969097282 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.8807196863200843 0.0 {NN|[MP]|[D{I|L}]|[EV]}D{[ET]|[MV]}{I|L}D{I|L}T{I|L} 2.5376 - 1853 1 1.245 57703.6 1.0 7042 5424 12459 HBL1_DMSO_200M_050219_1,12468 HBL1_DMSO_200M_050219_1,12468,PLSLVLYPFPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12469 63.763 272.0 1942200.0 25 0 210210.0 + 30767 RIADQFLGA 9 240 495.77250745288194 989.530461972564 2 495.7718994021416 MULTI CID FTMS 0 0 0 12459 459906.8125 0.0100076920889179 -6 0.3962936401367187 10 Unmodified _RIADQFLGA_ ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A 53.832793166522166 0.0319663582346103 3 {NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}Q{M(Oxidation (M))|F}{I|L}GA 9 2 + 50.063 0.0 0.0 5.0593 5.0593 74.487 0.0 0.0 0.0 1.213215142498548 3.710149894766701 1.213215142498548 1.213215142498548 0 0.8494850021680094 1.0457574905606752 0.6505149978319906 0.5902280322290657 {NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}Q{M(Oxidation (M))|F}{I|L}GA;{[VA]|[{I|L}G]}{[RE]|[WV]}Q{M(Oxidation (M))|F}{I|L}GA;{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}Q{M(Oxidation (M))|F}{I|L}GA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[NP]{M(Oxidation (M))|F}{I|L}GA;{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{M(Oxidation (M))|F}{I|L}GA;{[VA]|[{I|L}G]}{[RE]|[WV]}[AG]{M(Oxidation (M))|F}{I|L}GA;[KP]{[ET]|[MV]}Q{M(Oxidation (M))|F}{I|L}GA;{[DA]|[EG]}[R{I|L}]Q{M(Oxidation (M))|F}{I|L}GA;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}V]Q{M(Oxidation (M))|F}{I|L}GA;{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}[AG]{M(Oxidation (M))|F}{I|L}GA 5.0593;4.9367;4.2099;4.2013;4.1288;4.0061;3.8213;3.5801;3.5627;3.2794 -;-;-;-;-;-;-;-;-;- 3092 1 1.245 391483.7 1.0 7043 5424 12459 HBL1_DMSO_200M_050219_1,12469 HBL1_DMSO_200M_050219_1,12469,RIADQFLGA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12470 63.768 274.0 488390.0 25 0 65359.0 + -1 HLPETKFSEL 10 127 600.8166436400973 1199.6187343469944 2 600.8179809451103 MULTI CID FTMS 0 0 0 12459 371859.875 0.7998084683266661 -3 0.1445732116699218 11 Carbamidomethyl (C) _HLISLC(Carbamidomethyl (C))KAQM_ ENSG00000112297|ENST00000633556|CRYBG1;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1 29.081581746732265 0.3152867722954398 3 [H{I|L}]{I|L}{M(Oxidation (M))|F}S{M(Oxidation (M))|F}KT 8 -1 70.699 0.0 0.0 5.8935 0.0 0.0 0.0 223.0726259820922 223.0726259820922 47.73554946258571 0.0 0.0 0.0 0 0.5 1.6989700043360187 2.110924374808178 0.0 [H{I|L}]{I|L}{M(Oxidation (M))|F}S{M(Oxidation (M))|F}KT 5.8935 - 755 + 1 1.245 99064.4 1.0 7044 5424 12459 HBL1_DMSO_200M_050219_1,12470 HBL1_DMSO_200M_050219_1,12470,HLISLCKAQM False False HLPETKFSEL 63.767738 600.81798094511 9945717.0 12459.0 ENSG00000112297|ENST00000633556|CRYBG1;;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1 3.77239187558492 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12471 63.773 279.0 676550.0 25 0 46192.0 + 31155 RLPDQFSKL 9 161 552.3137226466305 1102.6128923600609 2 552.3164550662041 MULTI CID FTMS 0 0 0 12459 342911.40625 0.278332662010357 -4 0.2090415954589843 12 Unmodified _RLPDQFSKL_ ENSG00000158987|ENST00000509018|RAPGEF6;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;nc|ENSG00000158987|Q8TEU7-6|RAPGEF6 30.7034409873982 0.1405282614900322 3 {NN|[MP]|[D{I|L}]|[EV]}[RP]Q{M(Oxidation (M))|F}SK{I|L} 9 2 + 35.401 0.0 0.0 3.2107 3.2107 74.142 0.0 0.0 0.0 0.7032568205141203 20.153354619031106 0.7032568205141203 4.313637641589882 0 0.9049471895720984 1.0 0.3252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}[RP]Q{M(Oxidation (M))|F}SK{I|L};[{I|L}P][RD]Q{M(Oxidation (M))|F}SK{I|L};[R{I|L}][DP]Q{M(Oxidation (M))|F}SK{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RP]QHPK{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RP][AG]{M(Oxidation (M))|F}SK{I|L};[{I|L}P][RD][AG]{M(Oxidation (M))|F}SK{I|L};[R{I|L}][DP][AG]{M(Oxidation (M))|F}SK{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RP][AG]HPK{I|L};[KS]{[WT]|[RM]}M{I|L}PK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}QM{I|L}PK{I|L} 3.2107;2.8194;2.7364;2.5473;2.3755;1.9843;1.9013;1.7122;1.0613;0.93724 -;-;+;-;-;-;-;-;-;- + 735 1 1.245 146216.4 1.0 7045 5424 12459 HBL1_DMSO_200M_050219_1,12471 HBL1_DMSO_200M_050219_1,12471,RLPDQFSKL False True RLPDQFSKL 63.77289 552.316455066204 10595340.0 12459.0 nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;;ENSG00000158987|ENST00000509018|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-6|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6 4.61644172668457 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12473 63.783 369.0 262330.0 25 0 24574.0 + 17864 KQLEETNLQL 10 126 608.3327171416037 1214.6508813500072 2 608.3337280154228 MULTI CID FTMS 0 0 0 12472 441410.5625 0.1646982743100906 -3 0.1210098266601562 1 Unmodified _KQLEETNLQL_ ENSG00000083535|ENST00000326291|PIBF1;nc|ENSG00000083535|Q8WXW3-4|PIBF1 70.33199760932243 0.018925923965799 3 [AG]{I|L}KEETN{I|L}{I|L}Q 11 5 + 77.291 0.0 0.0 6.3632 6.3632 85.643 0.0 0.0 0.0 6.078570530910923 7.609860684774318 6.078570530910923 6.078570530910923 0 0.4049471895720985 1.5228787452803376 1.610924374808178 0.8494850021680094 [AG]{I|L}KEETN{I|L}{I|L}Q;[Q{I|L}]KEETN{I|L}{I|L}Q;[AG]K{I|L}EETN{I|L}{I|L}Q;[AG]{I|L}KEETGG{I|L}{I|L}Q;[AG]{I|L}S{[VA]|[{I|L}G]}ETN{I|L}{I|L}Q;[Q{I|L}]KEETGG{I|L}{I|L}Q;[KQ]{I|L}EETN{I|L}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}T{[VA]|[{I|L}G]}ETN{I|L}{I|L}Q;[Q{I|L}]S{[VA]|[{I|L}G]}ETN{I|L}{I|L}Q;[AG]S{I|L}{[VA]|[{I|L}G]}ETN{I|L}{I|L}Q 6.3632;5.8628;5.6454;5.6117;5.4446;5.1083;4.9865;4.9782;4.9412;4.9354 -;-;-;-;-;-;-;-;-;- 2250 1 1.227 76682.4 1.0 7046 5425 12472 HBL1_DMSO_200M_050219_1,12473 HBL1_DMSO_200M_050219_1,12473,KQLEETNLQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12474 63.784 27.0 2895100.0 25 0 388590.0 + 40379 VIAGTALASV 10 84 451.2698873296299 900.5252217260598 2 451.2719299197197 MULTI CID FTMS 0 0 0 12472 1837741.625 0.3327536109204882 -2 0.0780677795410156 2 Unmodified _VIAGTALASV_ ENSG00000089060|ENST00000680972|SLC8B1;ENST00000553238.5_1_12:113745708-113770716:-|nuORF;nc|ENSG00000089060|Q6J4K2-2|SLC8B1 34.40172386719151 0.2166836008404837 3 [VS]AVR{I|L}ASV 9 4 + 64.298 0.0 0.0 7.14 7.14 86.785 0.0 0.0 0.0 11.62778683655182 16.478174818886373 11.62778683655182 4.929155219028942 0 1.055462187404089 1.154901959985743 0.1382104921644452 0.0 [VS]AVR{I|L}ASV;[VS]A{I|L}AA{I|L}ASV;[VS]AV[VG]{I|L}ASV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VR{I|L}ASV;{[SA]|[TG]}VVR{I|L}ASV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AA{I|L}ASV;[VS][RV]A{I|L}ASV;[DV]A{I|L}VKASV;[VS]A{I|L}[RV]ASV;[VS]AVK{I|L}ADV 7.14;6.5927;6.1175;5.8488;5.3698;5.2955;5.1223;5.081;5.0579;5.019 -;-;-;-;-;-;-;-;-;- 495 1 1.227 68163.7 1.0 7047 5425 12472 HBL1_DMSO_200M_050219_1,12474 HBL1_DMSO_200M_050219_1,12474,VIAGTALASV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12475 63.788 218.0 732050.0 25 0 63238.0 + 36366 SYQDAAFTY 9 150 533.2301039173554 1064.4456549015108 2 533.2308227419853 MULTI CID FTMS 0 0 0 12472 921581.8125 0.4305667862981657 -2 0.0780677795410156 3 Unmodified _SYQDAAFTY_ chr5:169840852-169934652|48|17.27|0.78|4.47|+|ENST00000519628|DOCK2,DOCK2;ENSG00000134516|ENST00000520908|DOCK2;ENST00000520836.5_1_5:169174421-169268422:+|nuORF;ENST00000523351.5_1_5:169188379-169509859:+|nuORF;nc|ENSG00000134516|Q92608-2|DOCK2 62.57269311338072 0.0246576765497938 3 [YT]NDAA{M(Oxidation (M))|F}TY 9 2 [YT]NDAA + + 34.425 27.082 4.2632 3.2341 3.2341 50.637 0.0 0.0 0.0 0.0 9.30818467396726 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.0 [YT]NDAA{M(Oxidation (M))|F}TY 3.2341 - 1371 + 1 1.227 124890.9 1.0 7048 5425 12472 HBL1_DMSO_200M_050219_1,12475 HBL1_DMSO_200M_050219_1,12475,SYQDAAFTY True True SYQDAAFTY 63.788167 533.230822741985 17222378.0 12472.0 ENST00000523351.5_1_5:169188379-169509859:+|nuORF;;nc|ENSG00000134516|Q92608-2|DOCK2;;ENSG00000134516|ENST00000520908|DOCK2;;chr5:169840852-169934652|48|17.27|0.78|4.47|+|ENST00000519628|DOCK2,DOCK2;;ENST00000520836.5_1_5:169174421-169268422:+|nuORF 8.936881065368652 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12476 63.793 281.0 1371600.0 25 0 116120.0 + 12934 HACGVIATI 9 230 442.7363331588544 883.4581133845087 2 442.7362243533134 MULTI CID FTMS 0 0 0 12472 643889.1875 0.5189110240827435 2 -0.127227783203125 4 Unmodified _HACGVIATI_ ENSG00000183726|ENST00000374358|TMEM50A;ENST00000480937.5_1_1:25666968-25687193:+|nuORF 19.438996006549623 0.310492472477042 3 [HA]C(Carbamidomethyl (C))V{I|L}AT{I|L} 8 1 + 25.383 0.0 0.0 2.8732 2.8732 69.905 0.0 0.0 0.0 1.9168541598945688 4.254819828544605 1.9168541598945688 1.9168541598945688 0 0.5682503180159344 0.5086383061657274 0.0 0.0 [HA]C(Carbamidomethyl (C))V{I|L}AT{I|L};[PS]{I|L}[QP]ET{I|L};[HA]C(Carbamidomethyl (C))VA{I|L}T{I|L};[HA][CG]V{I|L}AT{I|L};[VG]{[ES]|[DT]|[{I|L}C]}[HA]AT{I|L};[{I|L}P]S[QP]ET{I|L};[HA][WK]ET{I|L};[HA][CG]VA{I|L}T{I|L};[VS]W[HA]AT{I|L};[VP]T[QP]ET{I|L} 2.8732;2.6562;1.8509;1.8248;1.3587;0.97113;0.95781;0.80254;0.62286;0.60058 -;-;-;+;-;-;-;-;-;- + 1619 1 1.227 293505.7 1.0 7049 5425 12472 HBL1_DMSO_200M_050219_1,12476 HBL1_DMSO_200M_050219_1,12476,HACGVIATI False True HACGVIATI 63.793336 442.736224353313 9341658.0 12472.0 ENST00000480937.5_1_1:25666968-25687193:+|nuORF;;ENSG00000183726|ENST00000374358|TMEM50A 3.304176092147827 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12477 63.799 316.0 224710.0 25 0 22132.0 27731 PLLSPWQDLTL 11 79 641.8567782855739 1281.6990036379475 2 641.8567382693291 MULTI CID FTMS 0 0 0 12472 450005.1875 1.0 0 0.0 5 Unmodified _PLLSPWQDLTL_ ENST00000320230.9_1_11:791329-791734:-|nuORF 10.073929032068715 0.8255972128077141 3 [{I|L}P]K[YQ]RP{I|L}[HM] 10 8 + 36.132 0.0 0.0 2.819 2.819 73.242 0.0 0.0 0.0 14.436974992327125 8.68440000316717 8.68440000316717 4.247425010840047 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}P]K[YQ]RP{I|L}[HM];[{I|L}P]K[YQ]RPH{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VVRP{I|L}[HM];[{I|L}P]K[R{M(Oxidation (M))|F}][Q{I|L}]{I|L}[HM];[YV]HPS[{I|L}P][KQ]T{I|L};[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VVRPH{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}P]K[R{M(Oxidation (M))|F}][Q{I|L}]H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}P]K[R{M(Oxidation (M))|F}][EP]K[HM];[YV]HPRVV{[WN]|[YH]}{I|L};[YV]HPRVV[WQ]V 2.819;2.4877;1.5264;1.4536;1.1958;1.195;1.1222;1.0813;0.85162;0.50274 -;-;-;-;-;-;-;-;-;- 162 1 1.227 60452.9 1.0 7050 5425 12472 HBL1_DMSO_200M_050219_1,12477 HBL1_DMSO_200M_050219_1,12477,PLLSPWQDLTL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12478 63.807 417.0 300130.0 25 0 22491.0 + 10940 GALAKLVEA 9 162 436.2661625069055 0 436.2654907107353 PEAK CID FTMS 0 0 0 12472 242900.484375 0.4217281759847855 2 -0.127227783203125 6 Unmodified _GALAKLVEA_ ENSG00000148303|ENST00000323345|RPL7A;ENST00000401715.2_1_6:10118966-10119482:+|nuORF;ENST00000453064.1_1_7:76744718-76745129:-|nuORF;ENST00000463740.5_1_9:136217403-136218218:+|nuORF;ENST00000473054.1_1_14:68805457-68806021:-|nuORF;ENST00000482859.1_1_4:113709241-113709472:-|nuORF;ENST00000492798.1_1_9:136217794-136218218:+|nuORF 37.97399986684836 0.0716774499419844 3 A 1 8 11.739 0.0 0.0 1.3485 0.0 0.0 241.1425663345895 555.3146456354124 796.4572119700019 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 + A 1.3485 + + 212 + 1 1.227 103004.3 1.0 7051 5425 12472 HBL1_DMSO_200M_050219_1,12478 HBL1_DMSO_200M_050219_1,12478,GALAKLVEA True True GALAKLVEA 63.80655 436.2676 3146278.5 12472.0 chr9:133350319-133351002|12|10.75|0.13|6.34|+|1|RPL7A,RPL7A|2;;ENST00000482859.1_1_4:113709241-113709472:-|nuORF;;ENST00000463740.5_1_9:136217403-136218218:+|nuORF;;ENSG00000148303|ENST00000323345|RPL7A;;ENST00000492798.1_1_9:136217794-136218218:+|nuORF;;ENST00000453064.1_1_7:76744718-76745129:-|nuORF;;ENST00000401715.2_1_6:10118966-10119482:+|nuORF;;ENST00000473054.1_1_14:68805457-68806021:-|nuORF 3.9945785204569497 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12479 63.814 421.0 280120.0 25 0 18509.0 + -1 EEKDMKMYKYF 11 109 772.3448426539602 1542.6751323747203 2 772.8488647341728 MULTI CID FTMS 0 0 0 12472 235273.53125 0.5275567581824432 2 -0.127227783203125 7 2 Oxidation (M) _EEKDM(Oxidation (M))KM(Oxidation (M))YKYF_ REV__ENSG00000182272|ENST00000329962|B4GALNT4 4.897010918128616 0.8520435188433833 3 [DP]SV{I|L}SG[MD]A[NG]A{M(Oxidation (M))|F}Y 15 -1 + 61.025 0.0 0.0 3.9558 3.9558 75.206 0.0 0.0 0.0 12.21848749616356 9.990371598534011 9.990371598534011 3.679767852945943 0 0.6549471895720985 1.6989700043360187 1.894599018282542 0.0 [DP]SV{I|L}SG[MD]A[NG]A{M(Oxidation (M))|F}Y;[DP]SV{I|L}SG[MD]A{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}Y;[DP]SV{I|L}SG[MD]{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}Y;[DP]SV{I|L}SG[WM][NG]A{M(Oxidation (M))|F}Y;[DP]SV{I|L}SGV[DC][NG]A{M(Oxidation (M))|F}Y;[DP]SV{I|L}S[MD]Q[NG]A{M(Oxidation (M))|F}Y;[DP]SV{I|L}SG[WM]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}Y;[DP]SV{I|L}SGV[DC]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}Y;[DP]SV{I|L}S[MD]Q{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}Y;[DP]SV{I|L}S[MD][W{I|L}]A{M(Oxidation (M))|F}Y 3.9558;3.7173;3.7173;3.7173;3.6978;3.6858;3.4802;3.4593;3.4487;3.4487 -;-;-;-;-;-;-;-;-;- 4736 1 1.227 83292.6 1.0 7052 5425 12472 HBL1_DMSO_200M_050219_1,12479 HBL1_DMSO_200M_050219_1,12479,EEKDMKMYKYF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12480 63.822 459.0 591710.0 25 0 66516.0 -1 RWKASMLL 8 207 340.86080634681554 1019.5605896406466 3 340.8595458865166 MULTI CID FTMS 0 0 0 12472 230036.984375 0.4881792409423156 -1 0.0394744873046875 8 Oxidation (M) _RWKASM(Oxidation (M))LL_ ENST00000382938.3_1_15:29363239-29394119:+|nuORF 9.38312468134398 0.7673771031149565 3 [HA]V{I|L}EWP{I|L} 8 -1 24.334 0.0 0.0 2.3867 0.0 0.0 0.0 71.01051343107409 71.01051343107409 7.110403483680656 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [HA]V{I|L}EWP{I|L} 2.3867 - 784 1 1.227 214981.2 1.0 7053 5425 12472 HBL1_DMSO_200M_050219_1,12480 HBL1_DMSO_200M_050219_1,12480,RWKASMLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12481 63.829 380.0 172010.0 25 0 15255.0 + -1 ELKAKCMTC 9 134 570.763038125574 0 570.7627441287041 PEAK CID FTMS 0 0 0 12472 205016.609375 1.0 0 0.0 9 2 Carbamidomethyl (C) _ELKAKC(Carbamidomethyl (C))MTC(Carbamidomethyl (C))_ REV__ENSG00000133710|ENST00000256084|SPINK5;REV__nc|ENSG00000133710|Q9NQ38-2|SPINK5;REV__nc|ENSG00000133710|Q9NQ38-3|SPINK5 7.910154910731844 0.3362437653303669 3 AVTP 4 -1 17.423 0.0 0.0 1.529 0.0 0.0 686.2140817669698 82.06704889468983 768.2811306616596 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AVTP 1.529 - 631 + 1 1.227 53865.1 1.0 7054 5425 12472 HBL1_DMSO_200M_050219_1,12481 HBL1_DMSO_200M_050219_1,12481,ELKAKCMTC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12482 63.836 416.0 227550.0 25 0 14994.0 28862 QAKHDLLQKTL 11 130 647.87899613915 1293.7434393451 2 647.8835327029228 MULTI CID FTMS 0 0 0 12472 169665.671875 1.0 0 0.0 10 Unmodified _QAKHDLLQKTL_ ENSG00000266028|ENST00000573034|SRGAP2 10.799506525563784 0.8105043987015127 3 {I|L}PSP{I|L}[KQ]T{I|L} 9 6 34.338 0.0 0.0 2.6541 0.0 0.0 298.1403321563212 0.0 298.1403321563212 0.0 12.153803341063371 0.0 0.0 0 0.2887254899964357 0.0 1.4731975075880328 0.0 {I|L}PSP{I|L}[KQ]T{I|L} 2.6541 - 524 + 1 1.227 75134.9 1.0 7055 5425 12472 HBL1_DMSO_200M_050219_1,12482 HBL1_DMSO_200M_050219_1,12482,QAKHDLLQKTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12483 63.846 454.0 414730.0 25 0 21475.0 + -1 NMWPWHKVNMF 11 151 753.3434987194361 1504.672444505672 2 753.3433715701103 MULTI CID FTMS 0 0 0 12472 145957.515625 0.3898411560886048 -2 0.0780677795410156 11 Oxidation (M) _NMWPWHKVNM(Oxidation (M))F_ REV__ENSG00000006788|ENST00000252172|MYH13 13.90604991867851 0.7458848613461305 3 [MN]PN{I|L}NEAAG{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T{I|L} 14 -1 + 78.966 0.0 0.0 5.248 5.248 73.56 0.0 0.0 0.0 2.3623875415304525 0.2789592172833295 0.2789592172833295 0.2789592172833295 0 0.7302046884880937 1.6989700043360187 0.5090530431636111 1.4559771852360797 [MN]PN{I|L}NEAAG{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T{I|L};[MN]PN{I|L}NEAAGRDG{M(Oxidation (M))|F};[MN]PN{I|L}NE[QA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T{I|L};[MN]PN{I|L}NE[QA]RDG{M(Oxidation (M))|F};[MN]PN{I|L}NE[W{M(Oxidation (M))|F}]{I|L}NN;[MN]PN{I|L}NEAAEQQ{M(Oxidation (M))|F};[MN]PN{I|L}NS[{I|L}A]GRDG{M(Oxidation (M))|F};[MN]PN{I|L}NE[RD]QQ{M(Oxidation (M))|F};[MN]PN{I|L}NS[Q{I|L}]RDG{M(Oxidation (M))|F};[MN]PN{I|L}N[RD]G{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T{I|L} 5.248;5.2295;5.205;5.1865;5.018;4.9864;4.968;4.9451;4.925;4.8049 -;-;-;-;-;-;-;-;-;- 6282 + 1 1.227 134477.4 1.0 7056 5425 12472 HBL1_DMSO_200M_050219_1,12483 HBL1_DMSO_200M_050219_1,12483,NMWPWHKVNMF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12485 63.85 0.13 462950000.0 25 0 43991000.0 + 22345 LPSPLKQTI 9 79 498.8078646768776 995.6011764205552 2 498.8087341189384 MULTI CID FTMS 0 0 0 12484 386383488.0 0.8026700172619653 3 -0.1524658203125 1 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 55.50274090549119 0.0285720310785888 3 {I|L}PSP{I|L}KQT{I|L} 9 0 + 84.326 0.0 0.0 8.4699 8.4699 93.819 0.0 0.0 0.0 48.62160350526902 13.46787486224656 13.46787486224656 9.208187539523747 0 0.9247425010840048 1.5228787452803376 0.6022338482433752 0.3807196863200844 + + {I|L}PSP{I|L}KQT{I|L};{I|L}PSP{I|L}K[AG]T{I|L} 8.4699;7.545 +;- + 669 + 1 1.216 53359.1 1.0 7057 5426 12484 HBL1_DMSO_200M_050219_1,12485 HBL1_DMSO_200M_050219_1,12485,LPSPLKQTI True True LPSPLKQTI 63.849775 498.808734118938 42774237184.0 12484.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 5.119171460469564 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12486 63.851 12.0 3261900.0 25 0 431980.0 -1 0 45 603.9675200152114 1808.8807306458343 3 603.9673950076103 MULTI CID FTMS 0 0 0 12484 2593257.75 0.5666749266679056 3 -0.1524658203125 2 3 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 6 -1 33.148 0.0 0.0 1.8325 0.0 0.0 1095.4947987287126 0.0 1095.4947987287126 0.0 11.911225100727592 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 1.8325 - 49 1 1.216 39275.2 1.0 7058 5426 12484 HBL1_DMSO_200M_050219_1,12486 HBL1_DMSO_200M_050219_1,12486, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12487 63.852 55.0 1707600.0 25 0 237580.0 9548 FLGTVEFLLLT 11 77 626.8612548708916 0 626.8612548708916 PEAK CID FTMS 0 0 0 -1 0 3 Unmodified _FLGTVEFLLLT_ ENSG00000255804|ENST00000540461|OR6J1 34.40172386719151 0.1843838221482756 3 {I|L}ASVSTV{I|L}T 9 7 65.558 0.0 0.0 5.2375 0.0 0.0 147.07035594683867 230.1149843805297 377.1853403273684 0.0 0.0 0.0 0.0 0 1.274227503252014 0.0 1.024227503252014 0.0 {I|L}ASVSTV{I|L}T 5.2375 - 268 + 1 1.216 76666.4 1.0 7059 5426 12484 HBL1_DMSO_200M_050219_1,12487 HBL1_DMSO_200M_050219_1,12487,FLGTVEFLLLT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12488 63.855 128.0 1448000.0 25 0 245390.0 + 21836 LPNTTFTQL 9 127 517.7809887424106 1033.5474245516211 2 517.7810546755791 MULTI CID FTMS 0 0 0 12484 2205536.0 1.0 0 0.0 4 Unmodified _LPNTTFTQL_ ENSG00000146006|ENST00000274711|LRRTM2 18.1463463914782 0.3454829746528889 3 {I|L}T 2 7 26.471 0.0 0.0 2.5612 0.0 0.0 0.0 816.3940232594739 816.3940232594739 4.419380037717797 0.0 0.0 0.0 0 0.1694451763165201 0.0 0.3807196863200844 0.0 {I|L}T 2.5612 - 295 + 1 1.216 145333.9 1.0 7060 5426 12484 HBL1_DMSO_200M_050219_1,12488 HBL1_DMSO_200M_050219_1,12488,LPNTTFTQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12489 63.858 147.0 266360.0 25 0 36575.0 -1 0 55 599.9997264834598 0 600.3340331912041 PEAK CID FTMS 0 0 0 12484 1421285.375 1.0 0 0.0 5 3 {I|L}ES{M(Oxidation (M))|F} 4 -1 17.423 0.0 0.0 1.4543 0.0 0.0 266.51756712531943 452.21515833072505 718.7327254560445 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}ES{M(Oxidation (M))|F} 1.4543 - 28 + 1 1.216 40372.7 1.0 7061 5426 12484 HBL1_DMSO_200M_050219_1,12489 HBL1_DMSO_200M_050219_1,12489, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12490 63.859 44.0 2432800.0 25 0 393340.0 + 3767 DAHIYLNHI 9 102 365.8573432354479 1094.5502003065435 3 365.8574706912041 MULTI CID FTMS 0 0 0 12484 1651726.875 1.0 0 0.0 6 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 19.361941925380144 0.3125782356748823 3 [HA]D{I|L}Y{I|L}NH{I|L} 9 2 [HA]D{I|L} + + 27.811 5.9299 1.3594 2.5408 2.5408 49.427 0.0 0.0 0.0 0.0 3.865827177720078 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.5994850021680094 [HA]D{I|L}Y{I|L}NH{I|L} 2.5408 - 268 + 1 1.216 87536.2 1.0 7062 5426 12484 HBL1_DMSO_200M_050219_1,12490 HBL1_DMSO_200M_050219_1,12490,DAHIYLNHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12491 63.86 29.0 1546500.0 25 0 281700.0 42491 VTKKGSGS 8 81 382.21990709755727 762.4252612619146 2 382.2196838259697 MULTI CID FTMS 0 0 0 12484 1537689.75 0.2321405899402457 3 -0.1524658203125 7 Unmodified _VTKKGSGS_ ENST00000420610.1_1_Y:14088999-14090148:+|nuORF 0.0 0.8243325171867699 3 H 1 8 9.6777 0.0 0.0 1.2693 0.0 0.0 607.3585020839834 0.0 607.3585020839834 0.0 9.589066219063254 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.2693 - 3 + 1 1.216 39973.0 1.0 7063 5426 12484 HBL1_DMSO_200M_050219_1,12491 HBL1_DMSO_200M_050219_1,12491,VTKKGSGS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12492 63.864 177.0 779520.0 25 0 77797.0 -1 0 178 514.2986372658692 513.2913607992691 1 514.2989990115166 MULTI CID FTMS 0 0 0 12484 1410646.5 1.0 0 0.0 8 3 {I|L}{I|L}Q 3 -1 23.222 0.0 0.0 4.5241 0.0 0.0 0.0 156.0411831471785 156.0411831471785 6.266690026630535 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}Q 4.5241 - 292 1 1.216 106805.0 1.0 7064 5426 12484 HBL1_DMSO_200M_050219_1,12492 HBL1_DMSO_200M_050219_1,12492, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12493 63.865 18.0 2123400.0 25 0 168340.0 + 5024 DGWDRTPQI 9 81 544.2616488323611 1086.508744731522 2 544.2611572146416 MULTI CID FTMS 0 0 0 12484 1177740.625 0.096098553308501 6 -0.3164901733398437 9 Unmodified _DGWDRTPQI_ ENSG00000100330|ENST00000401950|MTMR3;ENSG00000108389|ENST00000682306|MTMR4;nc|ENSG00000100330|Q13615-2|MTMR3;nc|ENSG00000100330|Q13615-3|MTMR3;nc|ENSG00000108389|Q9NYA4|MTMR4 29.84058131909904 0.1515068451768857 3 D{I|L} 2 7 22.351 0.0 0.0 2.0572 0.0 0.0 840.402147361525 0.0 840.402147361525 0.0 8.538923742439389 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 D{I|L} 2.0572 - 63 1 1.216 36669.1 1.0 7065 5426 12484 HBL1_DMSO_200M_050219_1,12493 HBL1_DMSO_200M_050219_1,12493,DGWDRTPQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12494 63.867 82.0 1219900.0 25 0 120980.0 + 25760 NIVEKLREV 9 112 550.3267108709638 1098.6388688087277 2 550.3268920779228 MULTI CID FTMS 0 0 0 12484 1148837.75 0.4043863103469668 -2 0.1122093200683593 10 Unmodified _NIVEKLREV_ ENSG00000132256|ENST00000380034|TRIM5;nc|ENSG00000132256|Q9C035-2|TRIM5;nc|ENSG00000132256|Q9C035-3|TRIM5;nc|ENSG00000132256|Q9C035-4|TRIM5;nc|ENSG00000132256|Q9C035-5|TRIM5;nc|ENSG00000132256|Q9C035-6|TRIM5 33.4449034751529 0.1114409586740657 3 N{I|L}VEK{I|L}{[RE]|[WV]}V 9 0 + 72.445 0.0 0.0 6.594 6.594 80.533 0.0 0.0 0.0 61.18566936842118 0.5014445271442725 0.5014445271442725 1.7609125905568137 0 0.805462187404089 2.0 0.4247425010840047 0.0 + + N{I|L}VEK{I|L}{[RE]|[WV]}V;VQVEK{I|L}{[RE]|[WV]}V;V[AG]VEK{I|L}{[RE]|[WV]}V 6.594;6.4338;3.7752 +;-;- + 96 + 1 1.216 80047.1 1.0 7066 5426 12484 HBL1_DMSO_200M_050219_1,12494 HBL1_DMSO_200M_050219_1,12494,NIVEKLREV True True NIVEKLREV 63.866835 550.3286 28566218.0 12484.0 nc|ENSG00000132256|Q9C035-6|TRIM5;;nc|ENSG00000132256|Q9C035-5|TRIM5;;nc|ENSG00000132256|Q9C035-4|TRIM5;;nc|ENSG00000132256|Q9C035-2|TRIM5;;nc|ENSG00000132256|Q9C035-3|TRIM5;;ENSG00000132256|ENST00000380034|TRIM5 4.911411126454671 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12495 63.868 46.0 858100.0 25 0 110210.0 -1 0 43 905.4467078088138 1808.8788626844275 2 905.4469482302666 MULTI CID FTMS 0 0 0 12484 1039771.5 0.9300632190635983 3 -0.1524658203125 11 3 Q 1 -1 13.495 0.0 0.0 0.74603 0.0 0.0 1662.8094027008322 0.0 1662.8094027008322 0.0 5.730640178391191 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.74603 - 10 + 1 1.216 34823.9 1.0 7067 5426 12484 HBL1_DMSO_200M_050219_1,12495 HBL1_DMSO_200M_050219_1,12495, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12496 63.869 40.0 1079600.0 25 0 117160.0 + 40950 VLVALRDTV 9 75 493.30626251013285 984.5979720870656 2 493.3054992556572 MULTI CID FTMS 0 0 0 12484 952976.3125 0.2548787049432854 5 -0.2762527465820312 12 Unmodified _VLVALRDTV_ REV__ENSG00000189350|ENST00000379558|TOGARAM2;REV__nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2 20.453626601364224 0.2830276176381075 3 [{I|L}V]S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{I|L} 7 -1 31.699 0.0 0.0 3.2195 0.0 0.0 0.0 183.152207276772 183.152207276772 17.050916422865257 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}V]S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{I|L} 3.2195 - 282 1 1.216 40443.1 1.0 7068 5426 12484 HBL1_DMSO_200M_050219_1,12496 HBL1_DMSO_200M_050219_1,12496,VLVALRDTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12497 63.87 23.0 2297000.0 25 0 379710.0 + 41154 VPALLEGAL 9 87 441.7680744852922 881.5215960373844 2 441.7682067751884 MULTI CID FTMS 0 0 0 12484 987975.5625 0.5278449083310933 34 -2.457832336425781 13 Unmodified _VPALLEGAL_ REV__ENSG00000115760|ENST00000421745|BIRC6 18.13498045792455 0.3457906370836843 3 VP 2 -1 37.747 0.0 0.0 4.2821 0.0 0.0 0.0 682.3776569754313 682.3776569754313 22.228115897629543 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 VP 4.2821 + + 175 + 1 1.216 46619.5 1.0 7069 5426 12484 HBL1_DMSO_200M_050219_1,12497 HBL1_DMSO_200M_050219_1,12497,VPALLEGAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12498 63.872 31.0 1346000.0 25 0 222990.0 + 11474 GIIDGSPRL 9 67 464.2666761884847 926.5187994437694 2 464.2659179568291 MULTI CID FTMS 0 0 0 12484 952437.0625 0.2735206116066557 -4 0.1937446594238281 14 Unmodified _GIIDGSPRL_ chr13:46344831-46349286|46|25.39|0.99|4.68|-|ENST00000417405|RUBCNL,RUBCNL;ENSG00000102445|ENST00000429979|RUBCNL;nc|ENSG00000102445|Q9H714-1|RUBCNL;nc|ENSG00000102445|Q9H714-2|RUBCNL;nc|ENSG00000102445|Q9H714-4|RUBCNL 24.020572477871973 0.2255576514309169 3 {[VA]|[{I|L}G]}{I|L}D 4 5 45.445 0.0 0.0 4.905 0.0 0.0 0.0 525.2792590991512 525.2792590991512 33.662575976154926 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[VA]|[{I|L}G]}{I|L}D 4.905 + + 49 + 1 1.216 39095.0 1.0 7070 5426 12484 HBL1_DMSO_200M_050219_1,12498 HBL1_DMSO_200M_050219_1,12498,GIIDGSPRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12499 63.873 35.0 1059300.0 25 0 112190.0 3320 AYLFYNQV 8 77 509.25354750284686 1016.4925420724936 2 509.2536193728447 MULTI CID FTMS 0 0 0 12484 783685.0625 1.0 0 0.0 15 Unmodified _AYLFYNQV_ ENST00000230640.9_1_5:54674249-54674312:+|nuORF 10.183394434864962 0.7604730176254005 3 TD{I|L}{I|L}RSV 7 6 25.706 0.0 0.0 2.5289 0.0 0.0 214.03888103909367 0.0 214.03888103909367 0.0 18.71600731282193 0.0 0.0 0 0.0 0.0 0.0 0.0 TD{I|L}{I|L}RSV 2.5289 - 99 + 1 1.216 32257.8 1.0 7071 5426 12484 HBL1_DMSO_200M_050219_1,12499 HBL1_DMSO_200M_050219_1,12499,AYLFYNQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12500 63.878 290.0 451020.0 25 0 38092.0 + 16268 IVTPEPAP 8 182 412.23031496903735 822.4460770048747 2 412.2303039431572 MULTI CID FTMS 0 0 0 12484 802121.8125 0.5744923573949331 10 -0.489837646484375 16 Unmodified _IVTPEPAP_ REV__ENSG00000172548|ENST00000311946|NIPAL4;REV__nc|ENSG00000172548|Q0D2K0-2|NIPAL4 6.354104778181461 0.7857632046190106 3 Q 1 -1 8.8224 0.0 0.0 1.0727 0.0 0.0 676.3767238328029 0.0 676.3767238328029 0.0 -3.641811645608669 -3.641811645608669 0.0 0 0.0 0.0 0.0 0.0 Q 1.0727 - 54 + 1 1.216 103333.8 1.0 7072 5426 12484 HBL1_DMSO_200M_050219_1,12500 HBL1_DMSO_200M_050219_1,12500,IVTPEPAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12501 63.884 322.0 195780.0 25 0 38927.0 -1 0 79 859.7384521365166 0 859.7384521365166 PEAK CID FTMS 0 0 0 -1 0 17 3 VD{M(Oxidation (M))|F}GQ 5 -1 7.8803 0.0 0.0 0.45884 0.0 0.0 842.0491566150268 326.17209802799067 1168.2212546430176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VD{M(Oxidation (M))|F}GQ 0.45884 - 217 + 1 1.216 48934.8 1.0 7073 5426 12484 HBL1_DMSO_200M_050219_1,12501 HBL1_DMSO_200M_050219_1,12501, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12502 63.892 437.0 848820.0 25 0 81538.0 -1 PITKKKMN 8 233 325.86062490398183 974.5600453121456 3 325.8602477908134 MULTI CID FTMS 0 0 0 12484 490693.875 1.0 0 0.0 18 Oxidation (M) _PITKKKM(Oxidation (M))N_ ENST00000557900.1_1_15:63191113-63191311:+|nuORF 13.90604991867851 0.7054780292895731 3 YP{M(Oxidation (M))|F}KPPKV 8 -1 + 34.4 0.0 0.0 3.5298 3.5298 75.034 0.0 0.0 0.0 14.249963741348076 1.4587787386256394 1.4587787386256394 4.486381355812988 0 0.0 0.6989700043360187 0.0 0.1861818737241735 YP{M(Oxidation (M))|F}KPPKV;YP{M(Oxidation (M))|F}KPV[KP];[{I|L}P][KT]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PKVYM{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[VG]RRM{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]KPP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.5298;3.0695;2.1237;0.62055;0.43508;0.20419;0.14364;0.040862 -;-;-;-;-;-;-;- 480 + 1 1.216 292341.2 1.0 7074 5426 12484 HBL1_DMSO_200M_050219_1,12502 HBL1_DMSO_200M_050219_1,12502,PITKKKMN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12503 63.898 316.0 251680.0 25 0 27735.0 + 19461 LFFFLRHSTL 10 118 640.8585082888603 0 640.8585082888603 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _LFFFLRHSTL_ REV__ENST00000393467.1_1_7:116166483-116166657:+|nuORF 13.042465956692816 0.351733747982019 3 {I|L}PS 3 -1 20.005 0.0 0.0 1.5633 0.0 0.0 284.09677378227383 695.4110425903457 979.5078163726196 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}PS 1.5633 - 26 + 1 1.216 63320.0 1.0 7075 5426 12484 HBL1_DMSO_200M_050219_1,12503 HBL1_DMSO_200M_050219_1,12503,LFFFLRHSTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12504 63.9 130.0 838110.0 25 0 76590.0 + 27464 PKEKIDHV 8 130 483.2729691826959 964.5313854321918 2 483.2718078494072 MULTI CID FTMS 0 0 0 12484 399841.90625 1.0 0 0.0 20 Unmodified _PKEKIDHV_ REV__ENST00000436287.1_1_1:224051789-224052101:-|nuORF 18.13498045792455 0.6430038125133779 3 [{M(Oxidation (M))|F}V]{I|L}VH[HD]V 8 -1 + 33.964 0.0 0.0 3.5213 3.5213 74.772 0.0 0.0 0.0 13.557743964882718 13.189486757454702 13.189486757454702 4.2609125905568135 0 0.0 0.0 1.360924374808178 0.0 [{M(Oxidation (M))|F}V]{I|L}VH[HD]V;[{M(Oxidation (M))|F}V]{I|L}HV[HD]V;[{M(Oxidation (M))|F}V]HV{I|L}[HD]V;[{M(Oxidation (M))|F}V]H{I|L}V[HD]V;[NP]PGV{I|L}NVR;[HD]{I|L}V{I|L}NVR;[{I|L}V][HD]{I|L}NVR;[{M(Oxidation (M))|F}V]H[KA][HA]GV;[HD]V{I|L}{I|L}NVR;[{M(Oxidation (M))|F}V]H[KA][HQ]V 3.5213;3.0795;2.6365;2.1445;1.1275;1.1044;1.0297;0.92642;0.79229;0.6495 -;-;-;-;-;-;-;-;-;- 1206 + 1 1.216 89604.7 1.0 7076 5426 12484 HBL1_DMSO_200M_050219_1,12504 HBL1_DMSO_200M_050219_1,12504,PKEKIDHV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12506 63.904 9.9 4509400.0 25 0 509790.0 21416 LPGPKGEPGFH 11 75 568.2991996791862 1134.5838464251724 2 568.2993041872978 MULTI CID FTMS 0 0 0 12505 7512104.5 0.483264901779319 -3 0.1667022705078125 1 Unmodified _LPGPKGEPGFH_ ENSG00000188153|ENST00000328300|COL4A5;nc|ENSG00000188153|P29400|COL4A5 5.296884461304476 0.8501568894076437 3 [VP]SG{M(Oxidation (M))|F}V{I|L}T 8 9 34.641 0.0 0.0 3.0532 0.0 0.0 0.0 331.1482134508162 331.1482134508162 20.68881289407813 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 [VP]SG{M(Oxidation (M))|F}V{I|L}T 3.0532 - 184 1 1.216 41213.1 1.0 7077 5427 12505 HBL1_DMSO_200M_050219_1,12506 HBL1_DMSO_200M_050219_1,12506,LPGPKGEPGFH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12507 63.908 214.0 805960.0 25 0 125200.0 + 39088 TVYTDFDGTRV 11 127 637.3057034614418 1272.5968539896835 2 637.3065673708916 MULTI CID FTMS 0 0 0 12505 928225.875 0.3796277731159498 4 -0.2217597961425781 2 Unmodified _TVYTDFDGTRV_ ENSG00000137193|ENST00000373509|PIM1;ENSG00000198355|ENST00000360612|PIM3;nc|ENSG00000137193|P11309-2|PIM1 55.24861242081279 0.0885632729458983 3 {[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}DGRS{I|L} 11 3 + 85.113 0.0 0.0 6.6882 6.6882 85.752 0.0 0.0 0.0 27.36758565225417 5.077577490074532 5.077577490074532 5.077577490074532 0 1.4802046884880935 2.0 1.2302046884880935 0.0 {[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}DGRS{I|L};{[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}DV[WK];{[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}DGT[RV];{[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}[Q{I|L}]AC{I|L};{[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}[Q{I|L}]{[WT]|[RM]};{[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}[Q{I|L}]CA{I|L};{[TV]|[{I|L}S]}YTV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAC{I|L};{[TV]|[{I|L}S]}YTV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{[WT]|[RM]};{[TV]|[{I|L}S]}YTD[QT]TV[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}YTV[WC(Carbamidomethyl (C))]V[{M(Oxidation (M))|F}V] 6.6882;6.2892;5.9412;5.6232;5.365;4.9897;4.9135;4.6554;4.481;4.4544 -;-;+;-;-;-;-;-;-;- + 1223 + 1 1.216 126600.9 1.0 7078 5427 12505 HBL1_DMSO_200M_050219_1,12507 HBL1_DMSO_200M_050219_1,12507,TVYTDFDGTRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12508 63.91 3.7 10096000.0 25 0 1114100.0 + 32322 RYIPTAAAF 9 58 505.2765834789475 1008.538614024695 2 505.2760803103447 MULTI CID FTMS 0 0 0 12505 11465649.0 0.3220421603337072 -3 0.1667022705078125 3 Unmodified _RYIPTAAAF_ ENSG00000058262|ENST00000243253|SEC61A1;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1;nc|ENSG00000065665|Q9H9S3-3|SEC61A2 27.628801355627647 0.1796483985696185 3 AAA{M(Oxidation (M))|F} 4 5 37.423 0.0 0.0 3.7106 0.0 0.0 630.3472157209 0.0 630.3472157209 0.0 27.95880017344075 0.0 0.0 0 1.0 0.0 0.0 0.0 + AAA{M(Oxidation (M))|F} 3.7106 + + 32 1 1.216 34751.3 1.0 7079 5427 12505 HBL1_DMSO_200M_050219_1,12508 HBL1_DMSO_200M_050219_1,12508,RYIPTAAAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12509 63.911 18.0 2997800.0 25 0 419190.0 + 30817 RIIDVVYNA 9 62 531.8007244008267 1061.5868958684532 2 531.8006469607353 MULTI CID FTMS 0 0 0 12505 2810399.75 0.0273624531302088 -9 0.5629959106445312 4 Unmodified _RIIDVVYNA_ ENSG00000142937|ENST00000396651|RPS8 24.99096001346401 0.2132109383330889 3 DVVY{[QG]|[NA]} 6 3 35.278 0.0 0.0 3.3232 0.0 0.0 382.2717152326188 0.0 382.2717152326188 0.0 24.820618910682484 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + DVVY{[QG]|[NA]} 3.3232 + + 40 1 1.216 44872.6 1.0 7080 5427 12505 HBL1_DMSO_200M_050219_1,12509 HBL1_DMSO_200M_050219_1,12509,RIIDVVYNA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12510 63.912 16.0 2203300.0 25 0 155570.0 + 44518 YPDRNLPTI 9 73 544.7897074529764 1087.5648619727526 2 544.7897216677666 MULTI CID FTMS 0 0 0 12505 2309922.25 0.3180897899930817 -9 0.5629959106445312 5 Unmodified _YPDRNLPTI_ ENSG00000115539|ENST00000264254|PDCL3 32.78568957990786 0.1150597335874693 3 YPV[WP]VNT{I|L} 9 5 + 44.848 0.0 0.0 4.1237 4.1237 81.566 0.0 0.0 0.0 19.62368696417565 12.796313546227225 12.796313546227225 9.208187539523747 0 0.0 1.3010299956639813 0.4247425010840047 0.0 YPV[WP]VNT{I|L};YPV[WP]VGGT{I|L};[TP]{I|L}AA{M(Oxidation (M))|F}QV{[QN]|[E{I|L}]|[KN]} 4.1237;3.277;1.0368 -;-;- 84 + 1 1.216 35270.9 1.0 7081 5427 12505 HBL1_DMSO_200M_050219_1,12510 HBL1_DMSO_200M_050219_1,12510,YPDRNLPTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12511 63.913 51.0 1917700.0 25 0 281550.0 + 11113 GEFTIKTV 8 112 447.7501201777644 893.4856874223289 2 447.7498962283134 MULTI CID FTMS 0 0 0 12505 2126412.0 0.2306976263795779 -3 0.1667022705078125 6 Unmodified _GEFTIKTV_ REV__ENSG00000158636|ENST00000695367|EMSY;REV__nc|ENSG00000158636|Q7Z589-4|EMSY;REV__nc|ENSG00000158636|Q7Z589-5|EMSY;REV__nc|ENSG00000158636|Q7Z589-6|EMSY;REV__nc|ENSG00000158636|Q7Z589|EMSY 74.92900055777586 0.1049409103209122 3 {[DA]|[EG]}{M(Oxidation (M))|F}T{I|L}KTV 8 -1 + 73.075 0.0 0.0 8.1787 8.1787 96.641 0.0 0.0 0.0 25.3357551167653 18.01615737469504 18.01615737469504 23.226825097560425 0 1.0189301784845295 1.6989700043360187 1.524227503252014 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}T{I|L}KTV;{[CT]|[{M(Oxidation (M))|F}G]}ET{I|L}KTV;[R{M(Oxidation (M))|F}]M{I|L}KTV;[K{I|L}]TT{M(Oxidation (M))|F}V{[DA]|[EG]};[K{I|L}]TTV{M(Oxidation (M))|F}{[DA]|[EG]};[K{I|L}]T{M(Oxidation (M))|F}TV{[DA]|[EG]};[KT]{I|L}T{M(Oxidation (M))|F}V{[DA]|[EG]};[K{I|L}]TVT{M(Oxidation (M))|F}{[DA]|[EG]};[KT]{I|L}TV{M(Oxidation (M))|F}{[DA]|[EG]};[K{I|L}]S{I|L}T{M(Oxidation (M))|F}{[DA]|[EG]} 8.1787;5.5791;4.1746;3.7627;3.3687;2.9967;2.7244;2.3879;2.3303;2.1396 +;-;-;-;-;-;-;-;-;- + 405 + 1 1.216 79590.1 1.0 7082 5427 12505 HBL1_DMSO_200M_050219_1,12511 HBL1_DMSO_200M_050219_1,12511,GEFTIKTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12512 63.914 24.0 2303900.0 25 0 442400.0 18775 LAPAAPAL 8 82 362.2226307667341 722.4307086002682 2 362.2222778201103 MULTI CID FTMS 0 0 0 12505 1982489.0 0.0958613117749193 -4 0.2052955627441406 7 Unmodified _LAPAAPAL_ ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A;REV__ENSG00000148396|ENST00000684901|SEC16A;REV__nc|ENSG00000148396|O15027-2|SEC16A;REV__nc|ENSG00000148396|O15027-3|SEC16A;REV__nc|ENSG00000148396|O15027-4|SEC16A;REV__nc|ENSG00000148396|O15027-5|SEC16A 0.7936320650641473 0.8195151834710337 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.216 51042.0 1.0 7083 5427 12505 HBL1_DMSO_200M_050219_1,12512 HBL1_DMSO_200M_050219_1,12512,LAPAAPAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12513 63.916 25.0 1643300.0 25 0 93867.0 + 9816 FPDPNVKYV 9 80 539.7821390043049 1077.5497250754097 2 539.7794067263603 MULTI CID FTMS 0 0 0 12505 1276781.75 0.2177763789417738 -9 0.5629959106445312 8 Unmodified _FPDPNVKYV_ ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF 29.081581746732265 0.1611639662936252 3 [DP]{M(Oxidation (M))|F} 3 7 23.952 0.0 0.0 2.2229 0.0 0.0 0.0 715.3778555287878 715.3778555287878 5.764837301042718 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 [DP]{M(Oxidation (M))|F} 2.2229 - 189 1 1.216 36909.5 1.0 7084 5427 12505 HBL1_DMSO_200M_050219_1,12513 HBL1_DMSO_200M_050219_1,12513,FPDPNVKYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12514 63.92 207.0 656410.0 25 0 139610.0 -1 0 62 1091.768937297762 3272.2849824934865 3 1092.103564441204 MULTI CID FTMS 0 0 0 12505 1121145.25 0.4690150777597161 -3 0.1667022705078125 9 3 VNT{M(Oxidation (M))|F} 4 -1 24.201 0.0 0.0 0.73958 0.0 0.0 2385.869939462991 422.16892419986567 2808.038863662857 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.3807196863200844 VNT{M(Oxidation (M))|F} 0.73958 - 336 + 1 1.216 118521.3 1.0 7085 5427 12505 HBL1_DMSO_200M_050219_1,12514 HBL1_DMSO_200M_050219_1,12514, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12515 63.921 36.0 972160.0 25 0 91417.0 + 5615 DPATRQMLI 9 78 522.7789600533197 0 522.7784301638603 PEAK CID FTMS 0 0 0 12505 672234.0 0.9852196136649072 -1 0.0544929504394531 10 Unmodified _DPATRQMLI_ ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-2|DNA2;nc|ENSG00000138346|P51530-3|DNA2;nc|ENSG00000138346|P51530-4|DNA2 20.41453444215458 0.197313647343139 3 M 1 8 6.9897 0.0 0.0 0.6698 0.0 0.0 244.17805211618708 665.3022554986936 909.4803076148808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 0.6698 + + 16 + 1 1.216 35059.2 1.0 7086 5427 12505 HBL1_DMSO_200M_050219_1,12515 HBL1_DMSO_200M_050219_1,12515,DPATRQMLI False True DPATRQMLI 63.920731 522.77843016386 4641429.0 12505.0 nc|ENSG00000138346|P51530-3|DNA2;;ENSG00000138346|ENST00000358410|DNA2;;nc|ENSG00000138346|P51530-4|DNA2;;nc|ENSG00000138346|P51530-2|DNA2 2.543439527352651 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12516 63.926 289.0 652550.0 25 0 58980.0 + 41614 VPPPAAAA 8 190 347.1988166142556 692.3830802953112 2 347.1985046267509 MULTI CID FTMS 0 0 0 12505 619273.75 0.4336434923715722 4 -0.2217597961425781 11 Unmodified _VPPPAAAA_ REV__ENSG00000176208|ENST00000321990|ATAD5;REV__nc|ENSG00000176208|Q96QE3-2|ATAD5 0.0 0.8243325171867699 3 {I|L} 1 -1 9.7539 0.0 0.0 1.4087 0.0 0.0 561.2881533927706 0.0 561.2881533927706 0.0 2.535422390485529 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4087 - 21 + 1 1.216 148971.8 1.0 7087 5427 12505 HBL1_DMSO_200M_050219_1,12516 HBL1_DMSO_200M_050219_1,12516,VPPPAAAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12517 63.931 278.0 765950.0 25 0 76646.0 + 31925 RVAGFNPAL 9 187 472.7692096797962 0 472.7689391970634 PEAK CID FTMS 0 0 0 12505 480810.8125 1.0 0 0.0 12 Unmodified _RVAGFNPAL_ nc|ENSG00000169905|Q9H496|TOR1AIP2 15.847184025352805 0.2451986057151378 3 VN{M(Oxidation (M))|F} 3 7 19.879 0.0 0.0 2.1069 0.0 0.0 200.1187283422111 380.2053746825697 580.3241030247808 0.0 0.0 0.0 0.0 0 0.6022338482433752 0.0 0.0 0.3054621874040891 VN{M(Oxidation (M))|F} 2.1069 - 300 + 1 1.216 158901.3 1.0 7088 5427 12505 HBL1_DMSO_200M_050219_1,12517 HBL1_DMSO_200M_050219_1,12517,RVAGFNPAL False True RVAGFNPAL 63.931141 472.768939197063 2592223.5 12505.0 nc|ENSG00000169905|Q9H496|TOR1AIP2 3.1811703046162925 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12518 63.936 269.0 1126400.0 25 0 156340.0 + 42635 VTVGTSVLTV 10 208 488.2901227975792 974.5656926619585 2 488.2903015017509 MULTI CID FTMS 0 0 0 12505 486726.90625 0.1496432852094997 -3 0.1667022705078125 13 Unmodified _VTVGTSVLTV_ ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-5|CDH23;nc|ENSG00000107736|Q9H251-6|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23 49.93300154707207 0.0805441195901191 3 {[TV]|[{I|L}S]}[VG]T{I|L}SVS{I|L} 10 4 + 56.102 0.0 0.0 5.7567 5.7567 75.693 0.0 0.0 0.0 6.641434418070347 3.721518964143506 3.721518964143506 0.4845500650402812 0 0.4985619177777272 2.0 1.5253187046026266 0.0 {[TV]|[{I|L}S]}[VG]T{I|L}SVS{I|L};{[TV]|[{I|L}S]}[VG]T{I|L}VSS{I|L};{NN|[MP]|[D{I|L}]|[EV]}KT{I|L}SVS{I|L};{NN|[MP]|[D{I|L}]|[EV]}KT{I|L}VSS{I|L};{[TV]|[{I|L}S]}[VG]TS{I|L}VS{I|L};{NN|[MP]|[D{I|L}]|[EV]}KTS{I|L}VS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}T{I|L}SVS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}T{I|L}VSS{I|L};{[TV]|[{I|L}S]}{[WT]|[RM]}G{I|L}VS{I|L};{[TV]|[{I|L}S]}[VG]TSV{I|L}S{I|L} 5.7567;5.7069;5.0752;5.0255;4.8495;4.1681;3.9547;3.9049;3.8751;3.8207 -;-;-;-;-;-;-;-;-;- 2215 1 1.216 228831.8 1.0 7089 5427 12505 HBL1_DMSO_200M_050219_1,12518 HBL1_DMSO_200M_050219_1,12518,VTVGTSVLTV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12519 63.942 295.0 849820.0 25 0 76578.0 + -1 LLLKCDPV 8 215 479.27759890493616 956.5406448766724 2 479.2781249880791 MULTI CID FTMS 0 0 0 12505 394073.1875 0.7553707439966427 5 -0.2619972229003906 14 Carbamidomethyl (C) _LLLKC(Carbamidomethyl (C))DPV_ REV__ENSG00000175946|ENST00000684634|KLHL38 15.768221252438446 0.6779680726941459 3 {I|L}{I|L}{M(Oxidation (M))|F}AVDN 7 -1 29.685 0.0 0.0 3.1034 0.0 0.0 0.0 181.0935404430041 181.0935404430041 11.798543405903423 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F}AVDN 3.1034 - 1010 1 1.216 189726.8 1.0 7090 5427 12505 HBL1_DMSO_200M_050219_1,12519 HBL1_DMSO_200M_050219_1,12519,LLLKCDPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12520 63.946 259.0 629060.0 25 0 65605.0 -1 SLNEQMYTR 9 135 579.2689028832058 1156.5232528332117 2 579.2684203982353 MULTI CID FTMS 0 0 0 12505 397539.3125 1.0 0 0.0 15 Oxidation (M) _SLNEQM(Oxidation (M))YTR_ ENSG00000067066|ENST00000340126|SP100;ENST00000494901.5_1_2:231375770-231407658:+|nuORF 18.1463463914782 0.3454829746528889 3 {[TV]|[{I|L}S]}NE 4 -1 38.174 0.0 0.0 3.3008 0.0 0.0 0.0 710.3018927134515 710.3018927134515 27.68954998148708 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.3252574989159953 {[TV]|[{I|L}S]}NE 3.3008 + + 137 + 1 1.216 123040.3 1.0 7091 5427 12505 HBL1_DMSO_200M_050219_1,12520 HBL1_DMSO_200M_050219_1,12520,SLNEQMYTR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12521 63.951 265.0 436530.0 25 0 25899.0 + 1335 AKDVINRVEDE 11 140 644.332651481185 1286.65075002917 2 644.3340942263603 MULTI CID FTMS 0 0 0 12505 336495.0 0.3903701277147042 3 -0.1681327819824218 16 Unmodified _AKDVINRVEDE_ REV__ENSG00000187775|ENST00000389840|DNAH17 31.26834338654808 0.3580123756476716 3 {[QV]|[N{I|L}]|[RA]|[KV]}SV{I|L}[NS]WQN{I|L} 11 -1 + 66.462 0.0 0.0 5.1655 5.1655 75.951 0.0 0.0 0.0 6.744109030280484 8.437343732377883 6.744109030280484 1.778259348524358 0 0.4876954943324546 1.3010299956639813 1.0356668758921828 0.6747425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}SV{I|L}[NS]WQN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}V[NS]WQN{I|L};[VG]AS{I|L}V[NS]WQN{I|L};[VG]ASV{I|L}[NS]WQN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VS{I|L}[NS]WQN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}SV{I|L}[NS]W[AG]N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}SV{I|L}[NS]{[DA]|[EG]}QN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VTV[NS]WQN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}V[NS]W[AG]N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}V[NS]{[DA]|[EG]}QN{I|L} 5.1655;5.0273;4.6413;4.5079;4.4645;4.456;4.456;4.3263;4.3178;4.3178 -;-;-;-;-;-;-;-;-;- 6609 1 1.216 92763.2 1.0 7092 5427 12505 HBL1_DMSO_200M_050219_1,12521 HBL1_DMSO_200M_050219_1,12521,AKDVINRVEDE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12522 63.956 272.0 375190.0 25 0 15644.0 + -1 ALEEQLQQIRAE 12 128 714.3776891737525 1426.740825414305 2 714.3789550662041 MULTI CID FTMS 0 0 0 12505 331970.1875 0.8221783010106875 -1 0.0544929504394531 17 Oxidation (M) _AIREKMKKNYM(Oxidation (M))_ ENSG00000186395|ENST00000269576|KRT10;P13645;P02535-1 15.248480904072842 0.7179608125786238 3 [{I|L}A]EEQ{I|L}QQ{I|L}RAE 12 -1 + 115.63 0.0 0.0 8.1042 8.1042 88.168 0.0 0.0 0.0 24.90158093209658 4.337589766985317 4.337589766985317 4.337589766985317 0 2.0669015600442577 2.0 0.7134679910804405 1.392159058960253 [{I|L}A]EEQ{I|L}QQ{I|L}RAE;[{I|L}A]EEQ{I|L}QQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[{I|L}A]EEQ{I|L}[AG]Q{I|L}RAE;[{I|L}A]EE[AG]{I|L}QQ{I|L}RAE;[{I|L}A]EEQ{I|L}Q[AG]{I|L}RAE;[{I|L}A]EE[AG]{I|L}QQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[{I|L}A]EEQ{I|L}Q[AG]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[{I|L}A]EEQ{I|L}[AG]Q{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[{I|L}A]EEQ{I|L}[AG][AG]{I|L}RAE;[{I|L}A]EE[AG]{I|L}Q[AG]{I|L}RAE 8.1042;7.8002;7.4665;7.4665;7.4665;7.1625;7.1625;7.1625;6.8306;6.8306 -;-;-;-;-;-;-;-;-;- 6613 + 1 1.216 77636.5 1.0 7093 5427 12505 HBL1_DMSO_200M_050219_1,12522 HBL1_DMSO_200M_050219_1,12522,AIREKMKKNYM False False ALEEQLQQIRAE 63.956272 714.378955066204 3431391.25 12505.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 8.517690022786459 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12523 63.963 275.0 223300.0 25 0 20293.0 22143 LPPRLTWPTLT 11 97 647.87899613915 1293.7434393451 2 647.7945434451103 MULTI CID FTMS 0 0 0 12505 121665.8984375 0.7170920145068385 2 -0.0979728698730468 18 Unmodified _LPPRLTWPTLT_ ENST00000515519.5_1_5:148442977-148443214:+|nuORF 6.2057823575117 0.8458686499021061 3 {[TV]|[{I|L}S]}PGE{I|L}{M(Oxidation (M))|F} 7 8 37.784 0.0 0.0 2.9205 0.0 0.0 0.0 547.3339294176186 547.3339294176186 21.58616365146052 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.0 {[TV]|[{I|L}S]}PGE{I|L}{M(Oxidation (M))|F} 2.9205 - 394 1 1.216 50397.9 1.0 7094 5427 12505 HBL1_DMSO_200M_050219_1,12523 HBL1_DMSO_200M_050219_1,12523,LPPRLTWPTLT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12525 63.967 5.6 9185400.0 25 0 937760.0 + 4180 DAPIVAHL 8 67 418.23718703814194 834.4598211430839 2 418.2372924685478 MULTI CID FTMS 0 0 0 12524 9983855.0 1.0 0 0.0 1 Unmodified _DAPIVAHL_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 30.19836241096484 0.408853459428176 3 {[DA]|[EG]}P{I|L}VAH{I|L} 8 0 + 60.492 0.0 0.0 7.2492 7.2492 86.889 0.0 0.0 0.0 29.064829305969475 10.041559597711576 10.041559597711576 4.771212547196626 0 0.3494850021680094 2.0 0.0 0.0 + + {[DA]|[EG]}P{I|L}VAH{I|L};{[DA]|[EG]}{I|L}PVAH{I|L} 7.2492;6.6774 +;- + 124 + 1 1.216 47333.7 1.0 7095 5428 12524 HBL1_DMSO_200M_050219_1,12525 HBL1_DMSO_200M_050219_1,12525,DAPIVAHL False True DAPIVAHL 63.966568 418.237292468548 187121412.0 12524.0 nc|ENSG00000110090|P50416-2|CPT1A;;ENSG00000110090|ENST00000265641|CPT1A 7.365639368693034 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12526 63.968 8.2 4059600.0 25 0 467800.0 + 26677 NYIEGTKML 9 67 534.7706123714519 1067.5266718097037 2 534.7734863162041 MULTI CID FTMS 0 0 0 12524 5037751.0 0.6244099078100832 4 -0.1996994018554687 2 Unmodified _NYISSVSWI_ ENSG00000133313|ENST00000324262|CNDP2;nc|ENSG00000133313|Q96KP4-2|CNDP2 21.74664581756881 0.2544899275067181 3 [YN]{I|L}E{[SA]|[TG]}KM{I|L} 9 4 + 49.777 0.0 0.0 4.6628 4.6628 80.612 0.0 0.0 0.0 30.04695582781785 2.3418248469008063 2.3418248469008063 6.706962271689747 0 0.9247425010840048 2.0 0.5 0.0 [YN]{I|L}E{[SA]|[TG]}KM{I|L};[YN]{I|L}{[WT]|[RM]}QM{I|L};[YN]{I|L}{[WT]|[RM]}{I|L}MQ;[YN]{I|L}{[WT]|[RM]}[AG]M{I|L};[YV]K{[SA]|[TG]}E{I|L}MQ;[KT][YR]E{I|L}MQ;[YV]Q{[WT]|[RM]}{I|L}MQ;[YV][AG]{[WT]|[RM]}{I|L}MQ 4.6628;4.0345;3.684;3.1669;2.3897;2.022;1.7614;0.89382 -;-;-;-;-;-;-;- 113 + 1 1.216 36104.6 1.0 7096 5428 12524 HBL1_DMSO_200M_050219_1,12526 HBL1_DMSO_200M_050219_1,12526,NYISSVSWI False False NYIEGTKML 63.967747 534.773486316204 206333904.0 12524.0 ENSG00000133313|ENST00000324262|CNDP2;;nc|ENSG00000133313|Q96KP4-2|CNDP2 5.394828160603841 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12527 63.969 11.0 6351200.0 25 0 935530.0 -1 0 71 366.7365590087173 731.4585650842347 2 366.7364074587822 MULTI CID FTMS 0 0 0 12524 6017854.0 0.0780902264271834 -8 0.4380416870117187 3 3 [{I|L}V]PK[Y{I|L}] 6 -1 + 41.712 0.0 0.0 5.7026 5.7026 90.714 0.0 0.0 0.0 26.30597159536684 4.09256854528806 4.09256854528806 41.71204671777453 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK[Y{I|L}] 5.7026 - 75 + 1 1.216 62133.0 1.0 7097 5428 12524 HBL1_DMSO_200M_050219_1,12527 HBL1_DMSO_200M_050219_1,12527, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12528 63.97 14.0 3373400.0 25 0 485550.0 + 5978 DQYPYLKSV 9 76 556.7848697670498 1111.5551866008996 2 556.7853881716728 MULTI CID FTMS 0 0 0 12524 3417727.0 0.9693618335619136 -2 0.116790771484375 4 Unmodified _DQYPYLKSV_ ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF 22.65808497894818 0.2428932432760099 3 {[QD]|[EN]|[WG]|[KD]|[RS]}AAA[PG]K{I|L}QN 11 8 + 35.45 0.0 0.0 3.1892 3.1892 70.342 0.0 0.0 0.0 0.0166728945909682 2.367585652254185 0.0166728945909682 1.804560644581315 0 0.5 0.0 0.0 0.5 {[QD]|[EN]|[WG]|[KD]|[RS]}AAA[PG]K{I|L}QN;{[QD]|[EN]|[WG]|[KD]|[RS]}AA[QP]K{I|L}QN;{[QD]|[EN]|[WG]|[KD]|[RS]}YPY{I|L}K[VS];{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]}[PG]K{I|L}QN 3.1892;3.0269;2.9762;2.8684 -;-;+;- + 209 + 1 1.216 39402.5 1.0 7098 5428 12524 HBL1_DMSO_200M_050219_1,12528 HBL1_DMSO_200M_050219_1,12528,DQYPYLKSV False True DQYPYLKSV 63.970103 556.785388171673 127553576.0 12524.0 ENSG00000147872|ENST00000276914|PLIN2;;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;;ENST00000475923.1_1_9:19126103-19126313:-|nuORF 8.105672200520834 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12529 63.971 12.0 2854600.0 25 0 465850.0 + 43628 YALNHTLSV 9 63 509.2715176128346 1016.5284822924692 2 509.2715331912041 MULTI CID FTMS 0 0 0 12524 2998219.0 0.0971101571100366 -8 0.4380416870117187 5 Unmodified _YALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 20.453626601364224 0.2830276176381075 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}{I|L}S 6 4 26.884 0.0 0.0 2.6447 0.0 0.0 0.0 366.1640163103005 366.1640163103005 9.30425743676567 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}{I|L}S 2.6447 - 52 1 1.216 33931.5 1.0 7099 5428 12524 HBL1_DMSO_200M_050219_1,12529 HBL1_DMSO_200M_050219_1,12529,YALNHTLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12530 63.975 182.0 1157900.0 25 0 228520.0 + 5004 DGVAVLKV 8 140 400.7475608434541 799.4805687537081 2 400.7473937869072 MULTI CID FTMS 0 0 0 12524 1210760.875 0.1373238312409335 -5 0.2675933837890625 6 Unmodified _DGVAVLKV_ ENSG00000144381|ENST00000388968|HSPD1;ENST00000388966.4_1_12:8169981-8170332:-|nuORF;ENST00000530524.1_1_8:7748917-7749049:-|nuORF 74.42276476219924 0.1056688965812189 3 [DG]VAV{I|L}KV 8 0 + 74.034 0.0 0.0 9.2602 9.2602 90.081 0.0 0.0 0.0 19.20818753952375 4.771212547196626 4.771212547196626 4.771212547196626 0 1.5044321917401078 1.2218487496163564 0.0 0.2614393726401688 + + [DG]VAV{I|L}KV;[DG]VAV{I|L}VK;[DG]VVA{I|L}KV;[DG]VVA{I|L}VK;{NN|[MP]|[D{I|L}]|[EV]}AAA{I|L}KV;{NN|[MP]|[D{I|L}]|[EV]}AAA{I|L}VK 9.2602;8.6635;7.9759;7.3791;4.2031;3.6063 +;-;-;-;-;- + 381 + 1 1.216 167053.5 1.0 7100 5428 12524 HBL1_DMSO_200M_050219_1,12530 HBL1_DMSO_200M_050219_1,12530,DGVAVLKV True True DGVAVLKV 63.974797 400.747393786907 116466904.0 12524.0 ENST00000388966.4_1_12:8169981-8170332:-|nuORF;;ENST00000530524.1_1_8:7748917-7749049:-|nuORF;;ENSG00000144381|ENST00000388968|HSPD1 5.947999636332194 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12531 63.976 41.0 1614400.0 25 0 247380.0 + 44591 YPFKPPKI 8 75 330.5321852651292 988.5747263955876 3 330.5320007205009 MULTI CID FTMS 0 0 0 12524 1126206.125 0.0643834868745182 -24 1.720623016357422 7 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 52.415 0.0 0.0 5.3021 5.3021 82.581 0.0 0.0 0.0 28.462695236253023 5.740312677277188 5.740312677277188 6.53212513775344 0 0.0 1.154901959985743 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};YP{M(Oxidation (M))|F}KP{I|L}[KP];YP{M(Oxidation (M))|F}K{I|L}P[KP] 5.3021;4.6413;4.3368 +;-;- + 79 + 1 1.216 57688.4 1.0 7101 5428 12524 HBL1_DMSO_200M_050219_1,12531 HBL1_DMSO_200M_050219_1,12531,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12532 63.979 171.0 1997100.0 25 0 279630.0 + 16175 IVDNTTMQL 9 174 517.7622790343296 1033.510005135459 2 517.7626830935478 MULTI CID FTMS 0 0 0 12524 989563.5 0.4831207254401419 -2 0.116790771484375 8 Unmodified _IVDNTTMQL_ ENSG00000067829|ENST00000217901|IDH3G;nc|ENSG00000067829|P51553-2|IDH3G 39.957323273325 0.0756908302845263 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}HVMKM 8 7 + 35.755 0.0 0.0 3.4596 3.4596 81.257 0.0 0.0 0.0 5.540840461760329 18.71250132184084 5.540840461760329 11.416506143517744 0 0.0 0.8239087409443188 0.7742275032520141 0.6109243748081782 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}HVMKM;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}HMVKM;[DV]{[HG]|PP}VH[NG]S{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T[HK]MKM;[DP][WK]VMKM;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}HV{[SA]|[TG]}TM;[DV]{[HG]|PP}T[HQ]Q{I|L};[DV]{[HG]|PP}VHEE{I|L};[DV]{[HG]|PP}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L};[DV]{[HG]|PP}VH[NG]TV 3.4596;2.3549;1.9819;1.9587;1.9247;1.8833;1.7926;1.7402;1.6233;1.5203 -;-;-;-;-;-;-;-;-;- 2912 1 1.216 259183.2 1.0 7102 5428 12524 HBL1_DMSO_200M_050219_1,12532 HBL1_DMSO_200M_050219_1,12532,IVDNTTMQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12533 63.981 56.0 1039300.0 25 0 88380.0 + 25374 NAYKTPLL 8 89 460.2652058833916 918.5158588335833 2 460.2660400271416 MULTI CID FTMS 0 0 0 12524 992241.5625 0.6880136907047936 -2 0.116790771484375 9 Unmodified _NAYKTPLL_ ENSG00000150990|ENST00000308736|DHX37;ENST00000542400.5_1_12:125435197-125437195:-|nuORF 46.020951573049366 0.1579632664462935 3 {[QG]|[NA]}YKTP{I|L}{I|L} 8 0 + 66.93 0.0 0.0 7.2867 7.2867 95.315 0.0 0.0 0.0 48.847659602351136 14.024174299985006 14.024174299985006 35.30130979747199 0 1.055462187404089 2.0 0.0 0.0 + + {[QG]|[NA]}YKTP{I|L}{I|L};{[QG]|[NA]}HH[KS]{I|L}{I|L} 7.2867;3.4434 +;- + 176 + 1 1.216 50603.1 1.0 7103 5428 12524 HBL1_DMSO_200M_050219_1,12533 HBL1_DMSO_200M_050219_1,12533,NAYKTPLL False True NAYKTPLL 63.980743 460.266040027142 8407876.0 12524.0 ENSG00000150990|ENST00000308736|DHX37;;ENST00000542400.5_1_12:125435197-125437195:-|nuORF 5.965391794840495 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12534 63.985 197.0 686610.0 25 0 47296.0 + 17791 KQISQAYEVL 10 148 589.8244114788245 1177.6342700244488 2 589.8246948122978 MULTI CID FTMS 0 0 0 12524 698469.875 1.0 0 0.0 10 Unmodified _KQISQAYEVL_ ENSG00000086061|ENST00000330899|DNAJA1;nc|ENSG00000086061|P31689-2|DNAJA1 62.86856922530385 0.0290614069976636 3 {[TV]|[{I|L}S]}[QA][KG]AYEV{I|L} 11 5 + 67.359 0.0 0.0 5.7199 5.7199 84.039 0.0 0.0 0.0 6.544387449636204 14.190166918179614 6.544387449636204 6.544387449636204 0 1.110924374808178 1.5228787452803376 0.9291746928241126 1.2689301784845295 {[TV]|[{I|L}S]}[QA][KG]AYEV{I|L};[AG][K{I|L}]{[QS]|[NT]}AYEV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[TA][KG]AYEV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DVT{I|L}YEV{I|L};{[TV]|[{I|L}S]}[QA][KQ]YEV{I|L};[AG]SA{I|L}[KG]AYEV{I|L};[AG]V[TA][KG]AYEV{I|L};[KA]{[VA]|[{I|L}G]}{[QS]|[NT]}AYEV{I|L};{[QS]|[NT]}A{I|L}[KG]AYEV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[TA][KQ]YEV{I|L} 5.7199;5.1641;5.04;4.9641;4.8647;4.6101;4.6028;4.5224;4.3895;4.1848 -;-;-;-;-;-;-;-;-;- 2420 1 1.216 108363.4 1.0 7104 5428 12524 HBL1_DMSO_200M_050219_1,12534 HBL1_DMSO_200M_050219_1,12534,KQISQAYEVL True True KQISQAYEVL 63.984528 589.824694812298 5802378.5 12524.0 nc|ENSG00000086061|P31689-2|DNAJA1;;ENSG00000086061|ENST00000330899|DNAJA1 3.3258742888768515 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12535 63.989 237.0 891370.0 25 0 90209.0 + 28872 QALGITTKI 9 155 472.7927918627518 943.5710307923036 2 472.7900878787041 MULTI CID FTMS 0 0 0 12524 596418.1875 0.4154277076224115 -2 0.116790771484375 11 Unmodified _QALGITTKI_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000459899.1_1_14:35857513-35858113:-|nuORF;ENST00000546564.5_1_12:120636605-120638589:-|nuORF;ENST00000548568.5_1_12:120636605-120638589:-|nuORF;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 61.60191391372663 0.0251951588191061 3 [QA]{I|L}G{I|L}TTK{I|L} 9 0 + 70.473 0.0 0.0 7.4687 7.4687 93.639 0.0 0.0 0.0 20.15794267183232 12.20159303405957 12.20159303405957 12.20159303405957 0 1.075257498915995 1.3010299956639813 0.5044321917401079 0.2614393726401688 + + [QA]{I|L}G{I|L}TTK{I|L};[QA]{I|L}G{I|L}TT{I|L}K;[KT]T{I|L}{[VA]|[{I|L}G]}[QA]{I|L} 7.4687;6.1756;0.56373 +;-;- + 913 + 1 1.216 160067.3 1.0 7105 5428 12524 HBL1_DMSO_200M_050219_1,12535 HBL1_DMSO_200M_050219_1,12535,QALGITTKI True True QALGITTKI 63.988958 472.790087878704 7993669.5 12524.0 ENSG00000089157|ENST00000392514|RPLP0;;nc|ENSG00000213553|Q8NHW5|RPLP0P6;;nc|ENSG00000089157|P05388-2|RPLP0;;ENST00000459899.1_1_14:35857513-35858113:-|nuORF;;ENST00000548568.5_1_12:120636605-120638589:-|nuORF;;ENST00000546564.5_1_12:120636605-120638589:-|nuORF 4.020642995834351 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12536 63.993 229.0 732710.0 25 0 118490.0 + 32074 RVLPPSALQSV 11 119 583.8481402842426 1165.6817276352851 2 584.3495971560478 MULTI CID FTMS 0 0 0 12524 481717.15625 1.0 0 0.0 12 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 40.72490554402381 0.2012291192650359 3 {I|L}P[PS]A{I|L}QW 8 4 38.919 0.0 0.0 3.3388 0.0 0.0 255.16996962715 0.0 255.16996962715 0.0 15.14645333192 0.0 0.0 0 0.75 0.0 0.805462187404089 0.0 {I|L}P[PS]A{I|L}QW 3.3388 - 527 1 1.216 128044.4 1.0 7106 5428 12524 HBL1_DMSO_200M_050219_1,12536 HBL1_DMSO_200M_050219_1,12536,RVLPPSALQSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12537 63.998 263.0 203100.0 25 0 12852.0 -1 YTGIMENIMNS 11 105 652.7787353396416 0 652.7787353396416 PEAK CID FTMS 0 0 0 -1 0 13 2 Oxidation (M) _YTGIM(Oxidation (M))ENIM(Oxidation (M))NS_ ENST00000446265.3_1:149647111-149647681:+|nuORF;ENST00000454544.2_1_1:147907560-147907839:+|nuORF 10.799506525563784 0.4428795054024277 3 EEVSSGE 7 -1 22.243 0.0 0.0 1.7064 0.0 0.0 451.1938052938319 132.04578577213127 583.2395910659632 0.0 0.0 0.0 0.0 0 0.5 0.0 0.8252574989159953 0.0 EEVSSGE 1.7064 - 337 + 1 1.216 47590.0 1.0 7107 5428 12524 HBL1_DMSO_200M_050219_1,12537 HBL1_DMSO_200M_050219_1,12537,YTGIMENIMNS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12539 64.002 21.0 1968900.0 25 0 569980.0 + -1 TPIKMCRRV 9 57 560.3110074710612 1118.6074620089223 2 560.3113891482353 MULTI CID FTMS 0 0 0 12538 2321300.25 0.1290170897464856 6 -0.2605972290039062 1 Oxidation (M) _TPIKM(Oxidation (M))CRRV_ REV__ENSG00000145349|ENST00000511664|CAMK2D;REV__ENST00000505132.1_1_4:114680392-114682224:-|nuORF;REV__ENST00000509907.1_1_4:114676199-114682224:-|nuORF;REV__nc|ENSG00000145349|Q13557-10|CAMK2D;REV__nc|ENSG00000145349|Q13557-11|CAMK2D;REV__nc|ENSG00000145349|Q13557-12|CAMK2D;REV__nc|ENSG00000145349|Q13557-3|CAMK2D;REV__nc|ENSG00000145349|Q13557-4|CAMK2D;REV__nc|ENSG00000145349|Q13557-5|CAMK2D;REV__nc|ENSG00000145349|Q13557-6|CAMK2D;REV__nc|ENSG00000145349|Q13557-8|CAMK2D;REV__nc|ENSG00000145349|Q13557-9|CAMK2D;REV__nc|ENSG00000145349|Q13557|CAMK2D 12.531546534597751 0.4974689918368763 3 [TP]{I|L} 3 -1 29.794 0.0 0.0 2.6635 0.0 0.0 0.0 804.3993070619098 804.3993070619098 10.40816854212089 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.6861818737241735 0.0 [TP]{I|L} 2.6635 + + 20 1 1.216 37469.4 1.0 7108 5429 12538 HBL1_DMSO_200M_050219_1,12539 HBL1_DMSO_200M_050219_1,12539,TPIKMCRRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12540 64.003 16.0 2172800.0 25 0 182690.0 + -1 DAMKYTIVV 9 76 528.2751451395659 1054.5357373459317 2 528.2758056521416 MULTI CID FTMS 0 0 0 12538 3221943.0 0.5584604176810102 -1 0.035675048828125 2 Oxidation (M) _DAM(Oxidation (M))KYTIVV_ nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A;ENSG00000152234|ENST00000398752|ATP5F1A 39.94969957227396 0.0757326808254658 3 {[DA]|[EG]}{M(Oxidation (M))|F}[YK]T{I|L}VV 9 -1 + 57.317 0.0 0.0 5.4353 5.4353 86.749 0.0 0.0 0.0 9.719712763997563 16.478174818886373 9.719712763997563 9.719712763997563 0 0.5 1.3979400086720375 0.8494850021680094 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}[YK]T{I|L}VV;[EP][QP]HH{I|L}VV;[EP][PS][WE]{I|L}VV;[EP]{[VA]|[{I|L}G]}[WQ]QVV;{NN|[MP]|[D{I|L}]|[EV]}[PA][NS]Q{I|L}VV;{[DA]|[EG]}[{I|L}P][WQ]QVV;[TP][DP][WE]{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}[PA][NS]{I|L}QVV;[EP][QP]E{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V;[TP][TP][WQ]QVV 5.4353;4.5136;4.2281;3.5548;3.263;2.9839;2.617;2.4712;2.2105;1.9437 +;-;-;-;-;-;-;-;-;- + 144 1 1.216 36900.6 1.0 7109 5429 12538 HBL1_DMSO_200M_050219_1,12540 HBL1_DMSO_200M_050219_1,12540,DAMKYTIVV False False DAMKYTIVV 64.003424 528.275805652142 88471488.0 12538.0 nc|ENSG00000152234|P25705-2|ATP5F1A;;nc|ENSG00000152234|P25705-3|ATP5F1A;;ENSG00000152234|ENST00000398752|ATP5F1A 7.086849212646484 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12541 64.005 61.0 1970400.0 25 0 232030.0 + 11499 GILLLEYLL 9 132 349.55396087683255 1045.6400532306975 3 349.5537902712822 MULTI CID FTMS 0 0 0 12538 1252217.375 0.0484737625174728 -11 0.6609687805175781 3 Unmodified _GILLLEYLL_ ENST00000546629.1_1_12:108620775-108626860:+|nuORF 38.15118350030904 0.0856056900103839 3 {[VA]|[{I|L}G]}{I|L}{I|L}VK[CS]{I|L} 9 4 48.285 0.0 0.0 4.6178 0.0 0.0 0.0 116.05112634830311 116.05112634830311 31.55393825101184 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.5994850021680094 0.8494850021680094 {[VA]|[{I|L}G]}{I|L}{I|L}VK[CS]{I|L} 4.6178 - 543 + 1 1.216 105842.5 1.0 7110 5429 12538 HBL1_DMSO_200M_050219_1,12541 HBL1_DMSO_200M_050219_1,12541,GILLLEYLL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12542 64.007 82.0 1432400.0 25 0 221040.0 + 1333 AKDPHLPQV 9 126 502.779389716049 1003.544226498898 2 502.7793762087822 MULTI CID FTMS 0 0 0 12538 947293.9375 0.435390460714584 7 -0.337371826171875 4 Unmodified _AKDPHLPQV_ REV__ENSG00000196517|ENST00000372310|SLC6A9;REV__nc|ENSG00000196517|P48067-3|SLC6A9;REV__nc|ENSG00000196517|P48067|SLC6A9 34.40172386719151 0.1061884637610825 3 {I|L}NPSH{I|L}PQV 9 -1 + 84.545 0.0 0.0 8.4246 8.4246 90.701 0.0 0.0 0.0 36.47817481888638 6.320232147054071 6.320232147054071 6.320232147054071 0 1.2302046884880935 2.0 0.3807196863200844 0.5774509799928715 {I|L}NPSH{I|L}PQV;{I|L}NPSH{I|L}PN{I|L};{I|L}NPSH{I|L}P[AG]V;{I|L}NPSH{I|L}PGG{I|L};{I|L}NPSH{I|L}P[VG]A;{I|L}PNSH{I|L}PQV;{I|L}GGPSH{I|L}PQV;{I|L}PNSH{I|L}PN{I|L};{I|L}PGGSH{I|L}PQV;{I|L}NP[WK]{M(Oxidation (M))|F}TV 8.4246;7.7948;6.9316;6.3018;6.1361;6.0478;5.5141;5.418;5.1302;5.0251 -;-;-;-;-;-;-;-;-;- 685 + 1 1.216 93490.2 1.0 7111 5429 12538 HBL1_DMSO_200M_050219_1,12542 HBL1_DMSO_200M_050219_1,12542,AKDPHLPQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12543 64.011 224.0 795330.0 25 0 109310.0 + 19708 LGMGVALGPV 10 185 457.2640638459234 912.5135747586468 2 457.2642394900322 MULTI CID FTMS 0 0 0 12538 840232.5 0.4633974565967746 17 -1.207305908203125 5 Unmodified _LGMGVALGPV_ REV__ENSG00000171227|ENST00000306406|TMEM37;REV__ENST00000465296.1_1_2:120189667-120195013:+|nuORF 12.531546534597751 0.6372748319968624 3 V 1 -1 11.594 0.0 0.0 1.2705 0.0 0.0 795.4340516036649 0.0 795.4340516036649 0.0 -9.208187539523747 -9.208187539523747 0.0 0 0.0 0.0 0.0 0.0 V 1.2705 + + 270 + 1 1.216 139484.0 1.0 7112 5429 12538 HBL1_DMSO_200M_050219_1,12543 HBL1_DMSO_200M_050219_1,12543,LGMGVALGPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12544 64.016 272.0 1147600.0 25 0 97388.0 -1 SVSIFCDSL 9 230 514.2437868579937 1026.4730207827872 2 514.7457763552666 MULTI CID FTMS 0 0 0 12538 409790.75 1.0 0 0.0 6 Carbamidomethyl (C) _SVSIFC(Carbamidomethyl (C))DSL_ ENSG00000206536|ENST00000383695|OR5K3 15.847184025352805 0.4077185912009129 3 {I|L}{I|L}AGW{I|L}GNA 9 -1 49.676 0.0 0.0 4.8395 0.0 0.0 0.0 127.96414619206315 127.96414619206315 30.0667531214534 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}AGW{I|L}GNA 4.8395 - 10450 1 1.216 232364.1 1.0 7113 5429 12538 HBL1_DMSO_200M_050219_1,12544 HBL1_DMSO_200M_050219_1,12544,SVSIFCDSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12545 64.021 285.0 994300.0 25 0 105440.0 -1 0 128 679.3469644031215 2035.0190638095648 3 679.6818725466728 MULTI CID FTMS 0 0 0 12538 351151.78125 1.0 0 0.0 7 3 {I|L}ETEC{[CT]|[{M(Oxidation (M))|F}G]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PSP{I|L}KQT{I|L} 18 -1 + 136.99 0.0 0.0 6.7318 6.7318 83.019 0.0 0.0 0.0 79.48834974498352 21.67355236779477 21.67355236779477 3.0102999566398125 0 0.9802046884880936 2.0 3.518311523702565 0.25 {I|L}ETEC{[CT]|[{M(Oxidation (M))|F}G]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PSP{I|L}KQT{I|L};{I|L}ETCE{[CT]|[{M(Oxidation (M))|F}G]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PSP{I|L}KQT{I|L};{I|L}ETE[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PSP{I|L}KQT{I|L};{I|L}ETC[W{M(Oxidation (M))|F}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PSP{I|L}KQT{I|L};{I|L}{M(Oxidation (M))|F}WE{[CT]|[{M(Oxidation (M))|F}G]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PSP{I|L}KQT{I|L};{I|L}{M(Oxidation (M))|F}W[W{M(Oxidation (M))|F}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PSP{I|L}KQT{I|L};{I|L}ETEC{[CT]|[{M(Oxidation (M))|F}G]}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}P{I|L}SP{I|L}K[NP];{I|L}ETEC{[CT]|[{M(Oxidation (M))|F}G]}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}P{I|L}SPK{I|L}[NP];{I|L}ETCE{[CT]|[{M(Oxidation (M))|F}G]}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}P{I|L}SP{I|L}K[NP];{I|L}ETEC[QP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}P{I|L}SP{I|L}K[NP] 6.7318;6.5839;6.4006;6.2526;4.6033;4.2727;4.2073;4.1459;4.0594;4.0594 -;-;-;-;-;-;-;-;-;- 15840 + 1 1.216 206077.9 1.0 7114 5429 12538 HBL1_DMSO_200M_050219_1,12545 HBL1_DMSO_200M_050219_1,12545, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12546 64.027 292.0 209830.0 25 0 27519.0 + 15555 IPYDAKTIQTI 11 90 631.8529800792131 1261.6914072252262 2 631.8568603396416 MULTI CID FTMS 0 0 0 12538 299004.59375 0.5014841459439005 -1 0.035675048828125 8 Unmodified _IPYDAKTIQTI_ ENSG00000133739|ENST00000360375|LRRCC1;nc|ENSG00000133739|Q9C099-2|LRRCC1 35.61225514009592 0.279986979807413 3 {I|L}PYD 4 7 53.404 0.0 0.0 4.2327 0.0 0.0 0.0 770.4415987604124 770.4415987604124 17.30659084026214 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.4247425010840047 0.0 + {I|L}PYD 4.2327 + + 642 + 1 1.216 56068.4 1.0 7115 5429 12538 HBL1_DMSO_200M_050219_1,12546 HBL1_DMSO_200M_050219_1,12546,IPYDAKTIQTI False True IPYDAKTIQTI 64.026632 631.856860339642 12226990.0 12538.0 ENSG00000133739|ENST00000360375|LRRCC1;;nc|ENSG00000133739|Q9C099-2|LRRCC1 4.336371739705403 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12547 64.033 323.0 137560.0 25 0 10719.0 + 160 AALSGTLSGV 10 68 875.4836382285779 874.4763617619778 1 875.4883300662041 MULTI CID FTMS 0 0 0 12538 286825.375 0.3301729095971179 3 -0.1640243530273437 9 Unmodified _AALSGTLSGV_ ENSG00000100297|ENST00000216122|MCM5 53.832793166522166 0.0576554960245129 3 {[MG]|[TS]}RR{I|L}SGV 8 5 + 41.336 0.0 0.0 4.7269 4.7269 84.195 0.0 0.0 0.0 6.170912423450403 5.8771376077312 5.8771376077312 9.419628234359578 0 0.3494850021680094 0.0 1.924742501084005 0.0 {[MG]|[TS]}RR{I|L}SGV;{[MG]|[TS]}RRS{I|L}GV;{[MG]|[TS]}RRSR{I|L};{[MG]|[TS]}RR{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V;{[MG]|[TS]}RRAAT{I|L};{[MG]|[TS]}RRS[VG]{I|L};AA{I|L}SGT{I|L}SR 4.7269;3.6498;1.7867;1.3393;0.90256;0.71975;0.42742 -;-;-;-;-;-;- 392 1 1.216 37994.0 1.0 7116 5429 12538 HBL1_DMSO_200M_050219_1,12547 HBL1_DMSO_200M_050219_1,12547,AALSGTLSGV True False AALSGTLSGV 64.032528 875.488330066204 5097372.5 12538.0 ENSG00000100297|ENST00000216122|MCM5 5.934329191843669 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12548 64.039 349.0 211250.0 25 0 26450.0 37860 TLVGVKWH 8 120 470.2722316846463 938.5299104360926 2 470.2726318240166 MULTI CID FTMS 0 0 0 12538 185228.296875 0.1902041320720714 6 -0.2605972290039062 10 Unmodified _TLVGVKWH_ L1MB5_dup414|chr1:156191205-156192060:-|1.6995444750627933|0.2947540995242821|2.53|48.0|57|3|anti-sense 13.50788311687929 0.7113601687236069 3 [VS]P 3 7 14.66 0.0 0.0 1.562 0.0 0.0 0.0 652.3530360066582 652.3530360066582 1.587770307430212 0.0 0.0 0.0 0 0.0 0.4202164033831898 0.0 0.0 [VS]P 1.562 - 95 1 1.216 59692.0 1.0 7117 5429 12538 HBL1_DMSO_200M_050219_1,12548 HBL1_DMSO_200M_050219_1,12548,TLVGVKWH False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 12549 64.045 332.0 643880.0 25 0 46033.0 + 16271 IVVDNVPQV 9 212 491.7812013889297 981.5478498446596 2 491.7818786501884 MULTI CID FTMS 0 0 0 12538 210042.9375 0.6942548315732957 -1 0.035675048828125 11 Unmodified _IVVDNVPQV_ ENSG00000106263|ENST00000360876|EIF3B;nc|ENSG00000106263|P55884-2|EIF3B 39.957323273325 0.0756908302845263 3 [{I|L}V][DN]VV 6 3 30.515 0.0 0.0 3.1089 0.0 0.0 0.0 339.16095843163583 339.16095843163583 6.332990852220384 0.0 0.0 0.0 0 0.5 2.0 0.2887254899964357 0.6139829889124311 [{I|L}V][DN]VV 3.1089 - 1835 1 1.216 159363.5 1.0 7118 5429 12538 HBL1_DMSO_200M_050219_1,12549 HBL1_DMSO_200M_050219_1,12549,IVVDNVPQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12550 64.053 430.0 654760.0 25 0 29170.0 + 106 AAIKIIRQL 9 214 342.56573164125405 1024.6753655239622 3 342.5655395388603 MULTI CID FTMS 0 0 0 12538 165859.75 0.9313273327854468 1 -0.070159912109375 12 Unmodified _AAIKIIRQL_ ENSG00000166848|ENST00000300086|TERF2IP 7.101721422024254 0.6667666702315642 3 [R{I|L}]AD 4 7 21.457 0.0 0.0 2.094 0.0 0.0 0.0 566.4024589427214 566.4024589427214 4.418154769883795 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.3252574989159953 [R{I|L}]AD 2.094 - 376 1 1.216 226224.6 1.0 7119 5429 12538 HBL1_DMSO_200M_050219_1,12550 HBL1_DMSO_200M_050219_1,12550,AAIKIIRQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12551 64.06 422.0 379580.0 25 0 43698.0 + + 41650 SPVPIPTV 8 176 405.24183436984697 808.469115806494 2 405.2421752810478 MULTI CID FTMS 0 0 0 12538 157126.359375 0.4037527724639137 -1 0.035675048828125 13 Unmodified _VPPSLPSL_ ENST00000370691.6_1_20:60885298-60889553:-|nuORF 46.92087301778293 0.1537303740847981 3 [VP]PS{I|L}PS{I|L} 8 -1 [VP]PS{I|L}P + + 23.711 10.598 1.7953 2.9329 2.9329 50.084 0.0 0.0 0.0 0.0 8.064016415563746 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.0 [VP]PS{I|L}PS{I|L} 2.9329 + + 230 + 1 1.216 125651.2 1.0 7120 5429 12538 HBL1_DMSO_200M_050219_1,12551 HBL1_DMSO_200M_050219_1,12551,VPPSLPSL False False SPVPIPTV 64.060034 405.242175281048 7577129.5 12538.0 ENST00000370691.6_1_20:60885298-60889553:-|nuORF 0.7788253581772248 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12552 64.068 398.0 374990.0 25 0 29988.0 + 15158 IPAEVPHI 8 141 438.2531564764295 0 438.2534973025322 PEAK CID FTMS 0 0 0 12538 132371.6875 0.4547399018055 -2 0.0979728698730468 14 Unmodified _IPAEVPHI_ ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1 52.69307289633392 0.0995269405071958 3 HQPQA 5 7 14.992 0.0 0.0 1.7144 0.0 0.0 244.1779610018529 66.03576074771718 310.2137217495701 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HQPQA 1.7144 - 260 + 1 1.216 117207.3 1.0 7121 5429 12538 HBL1_DMSO_200M_050219_1,12552 HBL1_DMSO_200M_050219_1,12552,IPAEVPHI True True IPAEVPHI 64.068326 438.253497302532 3008774.75 12538.0 ENSG00000153207|ENST00000648844|AHCTF1;;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;;nc|ENSG00000153207|Q8WYP5-3|AHCTF1 4.66820240020752 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12554 64.072 1.3 29400000.0 25 0 4683000.0 -1 MLVSAGRLGA 10 59 495.77250745288194 989.530461972564 2 495.7729064822197 MULTI CID FTMS 0 0 0 12553 45955332.0 1.0 0 0.0 1 Oxidation (M) _M(Oxidation (M))LVSAGRLGA_ ENST00000576090.5_1_17:79211356-79211560:-|nuORF 18.1463463914782 0.5430639438673815 3 Q{M(Oxidation (M))|F}{I|L}Q 4 -1 41.186 0.0 0.0 4.1621 0.0 0.0 455.2494374005875 0.0 455.2494374005875 0.0 27.2062251842808 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 Q{M(Oxidation (M))|F}{I|L}Q 4.1621 - 36 1 1.199 36061.7 1.0 7122 5430 12553 HBL1_DMSO_200M_050219_1,12554 HBL1_DMSO_200M_050219_1,12554,MLVSAGRLGA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12555 64.074 19.0 2629400.0 25 0 500830.0 + 536 AEIDVKKV 8 65 451.2698873296299 900.5252217260598 2 451.2685119509697 MULTI CID FTMS 0 0 0 12553 3006570.75 0.544389515882256 3 -0.1141433715820312 2 Unmodified _AEIDVKKV_ REV__ENSG00000184672|ENST00000521268|RALYL;REV__nc|ENSG00000184672|Q86SE5-3|RALYL 28.486842064014134 0.4448922141344407 3 {I|L}AW 3 -1 23.812 0.0 0.0 2.6443 0.0 0.0 512.2955189435562 0.0 512.2955189435562 0.0 9.832881222565248 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AW 2.6443 - 38 1 1.199 43736.4 1.0 7123 5430 12553 HBL1_DMSO_200M_050219_1,12555 HBL1_DMSO_200M_050219_1,12555,AEIDVKKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12556 64.075 15.0 2125800.0 25 0 141010.0 + 44738 YPKQSFTMV 9 66 550.77568873716 1099.5368245411198 2 550.7764770388603 MULTI CID FTMS 0 0 0 12553 3189478.5 1.0 0 0.0 3 Unmodified _YPKQSFTMV_ ENSG00000002834|ENST00000318008|LASP1;ENST00000584106.1_1_17:37026403-37055075:+|nuORF;nc|ENSG00000002834|Q14847-2|LASP1 18.13498045792455 0.3457906370836843 3 MV 2 7 18.94 0.0 0.0 1.7226 0.0 0.0 851.416217096587 0.0 851.416217096587 0.0 4.960762528683702 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + MV 1.7226 + + 40 + 1 1.199 34316.5 1.0 7124 5430 12553 HBL1_DMSO_200M_050219_1,12556 HBL1_DMSO_200M_050219_1,12556,YPKQSFTMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12557 64.076 20.0 2426400.0 25 0 316890.0 + 26113 NPPLKLSL 8 85 441.2767259766744 880.5388990201488 2 441.2764160037041 MULTI CID FTMS 0 0 0 12553 1869433.25 0.9068272657939164 -1 0.070159912109375 4 Unmodified _NPPLKLSL_ REV__CON__ENSEMBL:ENSBTAP00000024146;REV__ENSG00000175899|ENST00000318602|A2M;REV__ENST00000462568.1_1_12:9232657-9243123:-|nuORF 15.847184025352805 0.6768015514314958 3 NP 2 -1 36.075 0.0 0.0 4.0969 0.0 0.0 0.0 666.4199312799436 666.4199312799436 21.38210492164445 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 NP 4.0969 + + 139 + 1 1.199 45707.4 1.0 7125 5430 12553 HBL1_DMSO_200M_050219_1,12557 HBL1_DMSO_200M_050219_1,12557,NPPLKLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12558 64.077 44.0 951980.0 25 0 104050.0 + 17865 KQLEETNLQL 10 69 608.3327171416037 1214.6508813500072 2 608.3328735232353 MULTI CID FTMS 0 0 0 12553 1669902.75 0.6230709560573207 2 -0.0938644409179687 5 Unmodified _KQLEETNLQL_ ENSG00000083535|ENST00000326291|PIBF1;nc|ENSG00000083535|Q8WXW3-4|PIBF1 47.594388314883695 0.0942698883389255 3 [AG]{I|L}KEETN{I|L}Q{I|L} 11 3 + 76.432 0.0 0.0 6.2925 6.2925 85.588 0.0 0.0 0.0 6.294260687941502 8.80266382157349 6.294260687941502 6.294260687941502 0 0.5242275032520141 1.5228787452803376 0.8494850021680094 0.8494850021680094 [AG]{I|L}KEETN{I|L}Q{I|L};[Q{I|L}]KEETN{I|L}Q{I|L};[AG]{I|L}KEETGG{I|L}Q{I|L};[AG]{I|L}S{[VA]|[{I|L}G]}ETN{I|L}Q{I|L};[Q{I|L}]KEETGG{I|L}Q{I|L};[Q{I|L}]S{[VA]|[{I|L}G]}ETN{I|L}Q{I|L};[AG]S{I|L}{[VA]|[{I|L}G]}ETN{I|L}Q{I|L};[AG]VT{[VA]|[{I|L}G]}ETN{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[KQ]ETN{I|L}Q{I|L};[AG]{I|L}[DV][TA]TN{I|L}Q{I|L} 6.2925;5.7743;5.541;5.0453;5.0198;4.5242;4.4047;4.3018;4.2306;3.8523 -;-;-;-;-;-;-;-;-;- 761 1 1.199 37847.6 1.0 7126 5430 12553 HBL1_DMSO_200M_050219_1,12558 HBL1_DMSO_200M_050219_1,12558,KQLEETNLQL True True KQLEETNLQL 64.077171 608.332873523235 38940056.0 12553.0 nc|ENSG00000083535|Q8WXW3-4|PIBF1;;ENSG00000083535|ENST00000326291|PIBF1 6.594439506530762 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12559 64.079 57.0 925260.0 25 0 50165.0 + 25243 WPRPSSPPVV 10 84 561.312172563652 1120.609792194104 2 561.3096191287041 MULTI CID FTMS 0 0 0 12553 1338865.25 0.2488567977735576 7 -0.3429107666015625 6 Unmodified _MVNKTHPVPV_ nc|ENSG00000163082|Q8IWX5-2|SGPP2;ENSG00000163082|ENST00000321276|SGPP2 22.736283301280096 0.4578556481593033 3 [TP]{I|L}[NP]TSPPVV 11 7 + 57.637 0.0 0.0 5.1434 5.1434 78.753 0.0 0.0 0.0 11.49166239860314 15.070623213458028 11.49166239860314 3.533413629619808 0 0.7429928190999391 0.6989700043360187 1.174742501084005 0.0 [TP]{I|L}[NP]TSPPVV;[TP]{I|L}VS[Y{M(Oxidation (M))|F}]PVV;[VP]PQTTSPPVV;[TP]{I|L}[NP]{[RE]|[WV]}PVV;[VP]P[AG]TTSPPVV;[TP]{I|L}VS[YE][{I|L}T]V;[TP]{I|L}[NP][VP]WVV;[TP]{I|L}VS{[QG]|[NA]}P[HS]V;[VP]PQT{[RE]|[WV]}PVV;[VP][{I|L}T]S[Y{M(Oxidation (M))|F}]PVV 5.1434;4.8281;4.1179;3.5145;3.3033;2.7758;2.7097;2.6682;2.4891;2.3115 -;-;-;-;-;-;-;-;-;- 346 1 1.199 50450.6 1.0 7127 5430 12553 HBL1_DMSO_200M_050219_1,12559 HBL1_DMSO_200M_050219_1,12559,MVNKTHPVPV False False WPRPSSPPVV 64.078617 561.309619128704 15846353.0 12553.0 nc|ENSG00000163082|Q8IWX5-2|SGPP2;;ENSG00000163082|ENST00000321276|SGPP2 6.5387043952941895 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12560 64.083 246.0 644730.0 25 0 212960.0 27713 PLLKLAAP 8 123 411.77488639426593 821.5352198553319 2 411.7748290896416 MULTI CID FTMS 0 0 0 12553 885605.625 0.9365615383634112 -3 0.1681327819824218 7 Unmodified _PLLKLAAP_ ENST00000528315.1_2_11:828276-828405:+|nuORF 0.7936320650641473 0.8195151834710337 3 {I|L} 1 7 8.2879 0.0 0.0 1.0088 0.0 0.0 690.4397894127522 0.0 690.4397894127522 0.0 5.188942804446999 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0088 + + 20 + 1 1.199 123562.4 1.0 7128 5430 12553 HBL1_DMSO_200M_050219_1,12560 HBL1_DMSO_200M_050219_1,12560,PLLKLAAP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12561 64.085 80.0 1123300.0 25 0 123320.0 -1 0 122 434.24358628486095 433.23630981826096 1 434.2426025271416 MULTI CID FTMS 0 0 0 12553 825004.625 0.1936461702928958 14 -0.926666259765625 8 3 [VG]MK 4 -1 + 12.271 0.0 0.0 2.8324 2.8324 79.802 0.0 0.0 0.0 3.641707296605677 10.844243014599966 3.641707296605677 10.844243014599966 0 0.0 0.721246399047171 0.0 0.0 [VG]MK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VG] 2.8324;0.32931 -;- 19 1 1.199 74901.5 1.0 7129 5430 12553 HBL1_DMSO_200M_050219_1,12561 HBL1_DMSO_200M_050219_1,12561, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12562 64.09 244.0 747160.0 25 0 54361.0 + 26710 NYQAYRSYL 9 158 589.2854356590277 1176.556318384855 2 589.2862426638603 MULTI CID FTMS 0 0 0 12553 673478.6875 1.0 0 0.0 9 Unmodified _NYQAYRSYL_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 82.5293158979368 0.0169039238599547 3 [YN]QAYRYS{I|L} 9 2 + 72.621 0.0 0.0 6.1724 6.1724 88.252 0.0 0.0 0.0 32.138235881239545 19.24919076937762 19.24919076937762 9.208187539523747 0 1.841129063296272 2.0 1.055462187404089 0.7614393726401688 [YN]QAYRYS{I|L};[YN][AG]AYRYS{I|L};[YN]Q{I|L}[HM][TA]S{I|L};{NN|[MP]|[D{I|L}]|[EV]}C(Carbamidomethyl (C))RRAQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]Q{I|L}[HM]RC{I|L};[YN]QAYRSY{I|L};[YN]Q{I|L}[HM]{[SA]|[TG]}T{I|L};[YN]Q[HD][KP]Y{I|L};[YN]QA[WR]{[QD]|[EN]|[WG]|[KD]|[RS]}P;[YN]Q[HD]Y[KP]{I|L} 6.1724;5.3897;4.2091;4.182;4.0741;3.9542;3.8892;3.7304;3.6721;3.6564 -;-;-;-;-;+;-;-;-;- + 2024 + 1 1.199 138121.0 1.0 7130 5430 12553 HBL1_DMSO_200M_050219_1,12562 HBL1_DMSO_200M_050219_1,12562,NYQAYRSYL True True NYQAYRSYL 64.089582 589.28624266386 4675358.5 12553.0 ENSG00000035928|ENST00000349703|RFC1;;nc|ENSG00000035928|P35251|RFC1 5.083706855773926 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12563 64.095 272.0 341130.0 25 0 25366.0 19681 LGLRPLHQL 9 129 523.8266846202646 1045.638816307329 2 523.8272582888603 MULTI CID FTMS 0 0 0 12553 505399.59375 0.0725694969439372 -9 0.4794082641601562 10 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 28.486842064014134 0.1687311288560894 3 {[VA]|[{I|L}G]}{I|L}{I|L} 4 5 36.114 0.0 0.0 3.4538 0.0 0.0 0.0 646.3442476861936 646.3442476861936 24.69434491234056 0.0 0.0 0.0 0 0.6421590589602533 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}{I|L}{I|L} 3.4538 - 441 + 1 1.199 79286.8 1.0 7131 5430 12553 HBL1_DMSO_200M_050219_1,12563 HBL1_DMSO_200M_050219_1,12563,LGLRPLHQL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12564 64.101 354.0 571670.0 25 0 62150.0 16788 KGKGLIAA 8 208 379.248917424136 756.483281915072 2 379.2484924197197 MULTI CID FTMS 0 0 0 12553 481353.3125 0.4391443996017758 -5 0.2953605651855469 11 Unmodified _KGKGLIAA_ ENST00000586783.5_1_19:14000644-14000983:-|nuORF 0.0 0.8243325171867699 3 P 1 8 11.594 0.0 0.0 1.5326 0.0 0.0 641.4192311721994 0.0 641.4192311721994 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.5326 - 71 + 1 1.199 159944.2 1.0 7132 5430 12553 HBL1_DMSO_200M_050219_1,12564 HBL1_DMSO_200M_050219_1,12564,KGKGLIAA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12565 64.107 343.0 450990.0 25 0 55881.0 + -1 IPAAPQTLV 9 142 910.4226192068924 1818.8306854805844 2 910.4210082888604 MULTI CID FTMS 0 0 0 12553 388274.3125 1.0 0 0.0 12 nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 3 [MN]PN{I|L}NAD{[YC]|[HE]}S[H{I|L}]{I|L}{[QS]|[NT]} 16 -1 + 59.994 0.0 0.0 3.2985 3.2985 74.516 0.0 0.0 0.0 23.783031219833603 4.155147605512397 4.155147605512397 4.496009757278969 0 0.6549471895720985 1.6989700043360187 0.7059771852360797 1.192771648501328 [MN]PN{I|L}NAD{[YC]|[HE]}S[H{I|L}]{I|L}{[QS]|[NT]};[MN]PN{I|L}NAD{[C(Carbamidomethyl (C))E]|[WC]}[WK]{I|L}{[QS]|[NT]};[MN]PN{I|L}NW{[YC]|[HE]}S[H{I|L}]{I|L}{[QS]|[NT]};[MN]PN{I|L}NW{[C(Carbamidomethyl (C))E]|[WC]}[WK]{I|L}{[QS]|[NT]};[NP][KT]RS{[YC]|[HE]}DAN{I|L}D[WH];[NP][KT]VGS{[YC]|[HE]}DAN{I|L}D[WH];[NP]{I|L}PRWWDAN{I|L}D[YC(Carbamidomethyl (C))];[NP][KT]RS{[YC]|[HE]}DY{I|L}H[YC(Carbamidomethyl (C))];[NP][KT]VGS{[YC]|[HE]}DY{I|L}H[WH];[NP]{I|L}PRWWDY{I|L}H[YC(Carbamidomethyl (C))] 3.2985;3.0513;2.9296;2.6835;2.1764;2.161;2.107;2.0007;1.9843;1.9326 -;-;-;-;-;-;-;-;-;- 5770 + 1 1.199 105527.1 1.0 7133 5430 12553 HBL1_DMSO_200M_050219_1,12565 HBL1_DMSO_200M_050219_1,12565, False False IPAAPQTLV 64.107219 910.42100828886 4976960.0 12553.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 4.863219340642293 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12566 64.113 328.0 514340.0 25 0 103470.0 + 4511 DAYKKQFSQYI 11 136 695.8537516049392 1389.6929502766784 2 695.8540527224541 MULTI CID FTMS 0 0 0 12553 342956.84375 1.0 0 0.0 13 Unmodified _DAYKKQFSQYI_ ENSG00000122406|ENST00000370321|RPL5;ENST00000434805.1_1_1:35816564-35817152:+|nuORF;ENST00000480199.1_1_8:28157565-28157883:+|nuORF 51.76506608216692 0.1078551230621665 3 {[DA]|[EG]}YKKQ{M(Oxidation (M))|F}SQY{I|L} 11 0 + 64.408 0.0 0.0 4.6347 4.6347 82.388 0.0 0.0 0.0 13.50756462942642 15.070623213458036 13.50756462942642 9.128498242811006 0 1.548455006504028 1.5228787452803376 0.0 0.6307196863200843 + + {[DA]|[EG]}YKKQ{M(Oxidation (M))|F}SQY{I|L};{[DA]|[EG]}YKKQ{M(Oxidation (M))|F}S[AG]Y{I|L};{[DA]|[EG]}YKK[AG]{M(Oxidation (M))|F}SQY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DKKQ{M(Oxidation (M))|F}SQY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DKKQ{M(Oxidation (M))|F}S[AG]Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DKK[AG]{M(Oxidation (M))|F}SQY{I|L};[{I|L}P][RN]V[WD]SQY{I|L};[{I|L}P][RN][WD]VSQY{I|L};{[DA]|[EG]}YKKQ{M(Oxidation (M))|F}S[{M(Oxidation (M))|F}V]{[SA]|[TG]};{[DA]|[EG]}YKKQ{M(Oxidation (M))|F}[TP][RH] 4.6347;3.9779;3.9779;3.6627;3.0059;3.0059;2.2421;2.1522;2.1247;2.1065 +;-;-;-;-;-;-;-;-;- + 721 1 1.199 118625.6 1.0 7134 5430 12553 HBL1_DMSO_200M_050219_1,12566 HBL1_DMSO_200M_050219_1,12566,DAYKKQFSQYI True True DAYKKQFSQYI 64.11318 695.854052722454 2726660.75 12553.0 ENST00000480199.1_1_8:28157565-28157883:+|nuORF;;ENST00000434805.1_1_1:35816564-35817152:+|nuORF;;ENSG00000122406|ENST00000370321|RPL5 7.546786785125732 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12567 64.119 320.0 376710.0 25 0 14389.0 + -1 LHSKCCDDL 9 153 574.2492149468575 1146.4838769605149 2 574.2493774294853 MULTI CID FTMS 0 0 0 12553 305161.6875 0.2018784178141039 -11 0.6265449523925781 14 2 Carbamidomethyl (C) _LHSKC(Carbamidomethyl (C))C(Carbamidomethyl (C))DDL_ REV__ENSG00000162975|ENST00000295082|KCNF1 12.531546534597751 0.4974689918368763 3 S{I|L}{I|L}SY 5 -1 35.773 0.0 0.0 3.1203 0.0 0.0 565.1865249928456 0.0 565.1865249928456 0.0 14.19104488077798 0.0 0.0 0 0.7302046884880937 0.0 0.5283773187068795 0.0 S{I|L}{I|L}SY 3.1203 - 407 + 1 1.199 96698.3 1.0 7135 5430 12553 HBL1_DMSO_200M_050219_1,12567 HBL1_DMSO_200M_050219_1,12567,LHSKCCDDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12568 64.122 148.0 634730.0 25 0 53969.0 + 41620 VPPPLAKAI 9 124 453.29442015475456 904.5742873763091 2 453.2945739626884 MULTI CID FTMS 0 0 0 12553 285898.03125 0.1041855365318768 13 -0.8431930541992188 15 Unmodified _VPPPLAKAI_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;ENST00000588913.5_1_19:10244345-10246231:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 21.74664581756881 0.2544899275067181 3 VPP 3 6 47.435 0.0 0.0 5.2439 0.0 0.0 0.0 608.3789491457161 608.3789491457161 31.95046257204389 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + VPP 5.2439 + + 342 + 1 1.199 74185.8 1.0 7136 5430 12553 HBL1_DMSO_200M_050219_1,12568 HBL1_DMSO_200M_050219_1,12568,VPPPLAKAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12570 64.126 0.32 119890000.0 25 0 9825300.0 + 22346 LPSPLKQTI 9 67 498.8078646768776 995.6011764205552 2 498.8086730837822 MULTI CID FTMS 0 0 0 12569 144376608.0 0.2999268292634285 8 -0.4577407836914062 1 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 43.77239144664712 0.0547478964384323 3 {I|L}PS[{I|L}P]KQT{I|L} 9 0 + 71.511 0.0 0.0 7.1827 7.1827 90.85 0.0 0.0 0.0 52.58287461158695 15.207349035318174 15.207349035318174 9.208187539523742 0 0.9247425010840048 1.5228787452803376 0.8494850021680094 0.0 + + {I|L}PS[{I|L}P]KQT{I|L};{I|L}PS[{I|L}P]K[AG]T{I|L} 7.1827;6.2578 +;- + 327 + 1 1.199 39750.1 1.0 7137 5431 12569 HBL1_DMSO_200M_050219_1,12570 HBL1_DMSO_200M_050219_1,12570,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12571 64.129 128.0 573750.0 25 0 74902.0 + 27929 PLTPPAAP 8 115 382.21990709755727 762.4252612619146 2 382.2194396853447 MULTI CID FTMS 0 0 0 12569 543030.0 0.0819796740891663 8 -0.4577407836914062 2 Unmodified _PLTPPAAP_ REV__ENSG00000119522|ENST00000394215|DENND1A;REV__ENST00000473039.5_1_9:126143713-126520026:-|nuORF;REV__nc|ENSG00000119522|Q8TEH3-6|DENND1A;REV__nc|ENSG00000119522|Q8TEH3-7|DENND1A;REV__nc|ENSG00000119522|Q8TEH3|DENND1A 0.7936320650641473 0.8195151834710337 3 A 1 -1 8.5387 0.0 0.0 1.1199 0.0 0.0 673.3768431484365 0.0 673.3768431484365 0.0 0.0868704803471143 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.1199 + + 12 + 1 1.199 62802.5 1.0 7138 5431 12569 HBL1_DMSO_200M_050219_1,12571 HBL1_DMSO_200M_050219_1,12571,PLTPPAAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12572 64.131 93.0 803470.0 25 0 354700.0 -1 IEYQNHLSM 9 84 384.1779805125173 0 384.2040588259697 PEAK CID FTMS 0 0 0 12569 104178.25 0.7793311627477486 1 -0.0402374267578125 3 Oxidation (M) _IEYQNHLSM(Oxidation (M))_ ENSG00000117000|ENST00000372771|RLF 2.735195868890462 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.199 64626.9 1.0 7139 5431 12569 HBL1_DMSO_200M_050219_1,12572 HBL1_DMSO_200M_050219_1,12572,IEYQNHLSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12573 64.133 115.0 1044500.0 25 0 127670.0 -1 0 96 428.2423286184989 427.2350521518989 1 428.2414733767509 MULTI CID FTMS 0 0 0 12569 708473.1875 0.8311761360124282 1 -0.0402374267578125 4 3 V 1 -1 10.379 0.0 0.0 2.4292 0.0 0.0 310.1556052908622 0.0 310.1556052908622 0.0 -0.1059464953496913 -0.1059464953496913 0.0 0 0.0 0.0 0.0 0.0 V 2.4292 - 6 + 1 1.199 98164.7 1.0 7140 5431 12569 HBL1_DMSO_200M_050219_1,12573 HBL1_DMSO_200M_050219_1,12573, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12574 64.137 230.0 712570.0 25 0 135530.0 + 32033 RVIMPSGLEPA 11 129 585.3208084350348 1168.6270639368695 2 585.3219482302666 MULTI CID FTMS 0 0 0 12569 653813.375 0.7113720431365202 -5 0.2762527465820312 5 Unmodified _RVIMPSGLEPA_ ENST00000377459.2_1_6:27114971-27115085:+|nuORF 38.61474834105838 0.2337350513322792 3 WE{I|L}GV[R{I|L}]EPA 10 6 + 57.617 0.0 0.0 4.9303 4.9303 74.426 0.0 0.0 0.0 38.70419729680272 0.617968113107068 0.617968113107068 1.390275755188668 0 0.0 0.0 0.7742275032520141 0.7302046884880937 WE{I|L}GV[R{I|L}]EPA;[DV]T{I|L}GVQ{I|L}{I|L}[DP];[DV]T{I|L}GVQ[RN]PA;WE{I|L}RQ{I|L}{I|L}[DP];[VS]E{I|L}GVQ[RN]PA;[DV]T{I|L}RQ[RN]PA;[VS][RN]QVG{I|L}E[PA];[VS]E{I|L}RQ[RN]PA;[VS][RN]QR{I|L}E[PA];{[QN]|[E{I|L}]|[KN]}[{I|L}T]QVG{I|L}E[PA] 4.9303;4.8114;4.5544;4.4457;4.4109;4.4;4.3972;4.2565;4.2428;3.9622 -;-;-;-;-;-;-;-;-;- 1066 + 1 1.199 126252.5 1.0 7141 5431 12569 HBL1_DMSO_200M_050219_1,12574 HBL1_DMSO_200M_050219_1,12574,RVIMPSGLEPA False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12575 64.143 292.0 875750.0 25 0 62920.0 + 35118 SQWQSPPVV 9 218 514.263983231386 1026.5134135295718 2 514.2643310427666 MULTI CID FTMS 0 0 0 12569 393395.09375 0.4113948258533866 -5 0.2762527465820312 6 Unmodified _SQWQSPPVV_ ENSG00000135336|ENST00000392844|ORC3;ENST00000478028.1_1_6:88317392-88318948:+|nuORF;nc|ENSG00000135336|Q9UBD5-2|ORC3;nc|ENSG00000135336|Q9UBD5-3|ORC3 85.64151623876279 0.0161498729896241 3 MANG[VG]SPPVV 11 6 + 46.288 0.0 0.0 4.5093 4.5093 71.369 0.0 0.0 0.0 23.18436804729078 0.5674355903810664 0.5674355903810664 0.4568744131014099 0 1.337180496500464 0.0 0.0 0.0 MANG[VG]SPPVV;MANGA[TA]PPVV;MANQ[TA]PPVV;{[QS]|[NT]}WQSPPVV;[WQ]SQSPPVV;MAGGG[VG]SPPVV;MAGGGA[TA]PPVV;MANG[VG]SPVPV;MANGA[TA]PVPV;MANG[DP]KPVV 4.5093;4.4648;4.1174;3.966;3.8579;3.62;3.5755;3.5339;3.4894;3.4104 -;-;-;+;-;-;-;-;-;- + 6141 + 1 1.199 201524.3 1.0 7142 5431 12569 HBL1_DMSO_200M_050219_1,12575 HBL1_DMSO_200M_050219_1,12575,SQWQSPPVV True True SQWQSPPVV 64.14275 514.264331042767 7447298.5 12569.0 nc|ENSG00000135336|Q9UBD5-2|ORC3;;ENST00000478028.1_1_6:88317392-88318948:+|nuORF;;nc|ENSG00000135336|Q9UBD5-3|ORC3;;ENSG00000135336|ENST00000392844|ORC3 3.15353794892629 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12576 64.149 343.0 287200.0 25 0 22243.0 6396 DWDHYKQDSRY 11 96 756.8283806389578 1511.6422083447155 2 757.3309203982353 MULTI CID FTMS 0 0 0 12569 247613.265625 0.4661217164775011 -7 0.3884620666503906 7 Unmodified _DWDHYKQDSRY_ ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1 2.498486711656943 0.8633599123570009 3 {M(Oxidation (M))|F}ADQQA[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}Y 10 8 49.914 0.0 0.0 3.302 0.0 0.0 207.0740453581905 0.0 207.0740453581905 0.0 38.76795939188455 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {M(Oxidation (M))|F}ADQQA[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}Y 3.302 - 4764 + 1 1.199 72208.1 1.0 7143 5431 12569 HBL1_DMSO_200M_050219_1,12576 HBL1_DMSO_200M_050219_1,12576,DWDHYKQDSRY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12577 64.156 402.0 444010.0 25 0 37012.0 + -1 VPSVAMSTV 9 173 453.7320047986672 905.4494566641343 2 453.7321349978447 MULTI CID FTMS 0 0 0 12569 191901.078125 0.7835469463302449 -2 0.1237869262695312 8 Oxidation (M) _VPSVAM(Oxidation (M))STV_ REV__ENST00000332503.5_1_17:46656675-46656903:-|nuORF 15.847184025352805 0.4077185912009129 3 [VP]S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 8 -1 + 24.575 0.0 0.0 2.7141 2.7141 79.751 0.0 0.0 0.0 9.0018312907727 -0.4866434847534862 -0.4866434847534862 11.26532548146776 0 0.0 1.6989700043360187 0.7742275032520141 0.0 [VP]S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[VP]S{[VA]|[{I|L}G]}{[CA]|SS}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[PS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[PS]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[TP]{[QD]|[EN]|[WG]|[KD]|[RS]}VS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[TP][WR]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[QP]{[ES]|[DT]|[{I|L}C]}VS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}[RD]N{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[EP]{[ES]|[DT]|[{I|L}C]}[KG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}[RN]D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.7141;1.47;0.79094;0.45847;0.43793;0.39495;0.26707;0.2143;0.18448;0.076315 -;-;-;-;-;-;-;-;-;- 972 1 1.199 139511.4 1.0 7144 5431 12569 HBL1_DMSO_200M_050219_1,12577 HBL1_DMSO_200M_050219_1,12577,VPSVAMSTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12578 64.162 331.0 311640.0 25 0 27716.0 20988 LNQLRVVSIR 10 119 599.3769172625282 0 599.7717773318291 PEAK CID FTMS 0 0 0 12569 171455.5625 0.9713069748462244 1 -0.0402374267578125 9 Unmodified _LNQLRVVSIR_ ENST00000469100.5_1_1:33240923-33241058:-|nuORF 6.2057823575117 0.3961065659209838 3 VA{I|L}TE 5 9 16.44 0.0 0.0 1.3737 0.0 0.0 598.3649191913036 82.0670412652953 680.4319604565989 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 VA{I|L}TE 1.3737 - 201 + 1 1.199 80262.3 1.0 7145 5431 12569 HBL1_DMSO_200M_050219_1,12578 HBL1_DMSO_200M_050219_1,12578,LNQLRVVSIR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12580 64.166 2.2 15390000.0 25 0 1889700.0 + 32323 RYIPTAAAF 9 47 505.2765834789475 1008.538614024695 2 505.2767516970634 MULTI CID FTMS 0 0 0 12579 21486432.0 0.6035015531299883 2 -0.0591812133789062 1 Unmodified _RYIPTAAAF_ ENSG00000058262|ENST00000243253|SEC61A1;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1;nc|ENSG00000065665|Q9H9S3-3|SEC61A2 27.628801355627647 0.1796483985696185 3 AAA{M(Oxidation (M))|F} 4 5 40.433 0.0 0.0 4.0091 0.0 0.0 630.349412986525 0.0 630.349412986525 0.0 30.96910013008056 0.0 0.0 0 1.0 0.0 0.0 0.0 + AAA{M(Oxidation (M))|F} 4.0091 + + 52 1 1.186 36486.2 1.0 7146 5432 12579 HBL1_DMSO_200M_050219_1,12580 HBL1_DMSO_200M_050219_1,12580,RYIPTAAAF False True RYIPTAAAF 64.166269 505.276751697063 512414720.0 12579.0 ENSG00000065665|ENST00000298428|SEC61A2;;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;;nc|ENSG00000065665|Q9H9S3-3|SEC61A2;;nc|ENSG00000058262|P61619-3|SEC61A1;;ENSG00000058262|ENST00000243253|SEC61A1 7.295054912567139 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12581 64.167 4.9 6179800.0 25 0 937230.0 + 13808 HTKFVTSMKG 10 53 568.2991996791862 1134.5838464251724 2 568.2996093630791 MULTI CID FTMS 0 0 0 12579 11345381.0 0.7298653040055489 2 -0.0591812133789062 2 Unmodified _HTKFVTSMKG_ REV__ENSG00000179869|ENST00000435803|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-3|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-4|ABCA13;REV__nc|ENSG00000179869|Q86UQ4|ABCA13 5.731851221503515 0.7001233259664787 3 T{I|L}Y 3 -1 20.445 0.0 0.0 1.802 0.0 0.0 334.17162826286614 420.1905916803344 754.3622199432006 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T{I|L}Y 1.802 - 21 + 1 1.186 28768.2 1.0 7147 5432 12579 HBL1_DMSO_200M_050219_1,12581 HBL1_DMSO_200M_050219_1,12581,HTKFVTSMKG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12582 64.169 36.0 1253400.0 25 0 193040.0 + 13602 HPNSAVLMV 9 64 484.25522516908654 966.4958974049732 2 484.2552368044853 MULTI CID FTMS 0 0 0 12579 1877689.875 0.5813281346749226 2 -0.0591812133789062 3 Unmodified _HPNSAVLMV_ ENSG00000163811|ENST00000407426|WDR43 32.30548876998284 0.1201446275138228 3 V{I|L}MV 4 5 23.628 0.0 0.0 2.4447 0.0 0.0 506.2248707501969 0.0 506.2248707501969 0.0 9.648415687162952 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.0 + V{I|L}MV 2.4447 + + 53 1 1.186 40347.2 1.0 7148 5432 12579 HBL1_DMSO_200M_050219_1,12582 HBL1_DMSO_200M_050219_1,12582,HPNSAVLMV True True HPNSAVLMV 64.168627 484.255236804485 21270706.0 12579.0 ENSG00000163811|ENST00000407426|WDR43 5.959238211313884 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12583 64.17 26.0 1829900.0 25 0 351270.0 + 11475 GIIDGSPRL 9 67 464.2666761884847 926.5187994437694 2 464.2669555544853 MULTI CID FTMS 0 0 0 12579 1724888.75 0.4953530731102138 2 -0.0591812133789062 4 Unmodified _GIIDGSPRL_ chr13:46344831-46349286|46|25.39|0.99|4.68|-|ENST00000417405|RUBCNL,RUBCNL;ENSG00000102445|ENST00000429979|RUBCNL;nc|ENSG00000102445|Q9H714-1|RUBCNL;nc|ENSG00000102445|Q9H714-2|RUBCNL;nc|ENSG00000102445|Q9H714-4|RUBCNL 34.40172386719151 0.1061884637610825 3 {[VA]|[{I|L}G]}{I|L}DGS[RP]{I|L} 9 0 + 60.762 0.0 0.0 6.5581 6.5581 86.531 0.0 0.0 0.0 48.77236997459274 7.301373021504354 7.301373021504354 6.460828060918828 0 0.3807196863200844 2.0 0.4247425010840047 0.4247425010840047 + + {[VA]|[{I|L}G]}{I|L}DGS[RP]{I|L};{[VA]|[{I|L}G]}{I|L}DG[RP]S{I|L};{[VA]|[{I|L}G]}{I|L}DG[RP]TV;{[VA]|[{I|L}G]}{I|L}D{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}D{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[VA]|[{I|L}G]}{I|L}[{M(Oxidation (M))|F}E][HV]{I|L};{[VA]|[{I|L}G]}{I|L}[{M(Oxidation (M))|F}E][H{I|L}]V;{[VA]|[{I|L}G]}WW[RP]{I|L} 6.5581;5.8608;5.6851;5.2104;4.8855;3.7016;3.526;3.3347 +;-;-;-;-;-;-;- + 107 + 1 1.186 42331.8 1.0 7149 5432 12579 HBL1_DMSO_200M_050219_1,12583 HBL1_DMSO_200M_050219_1,12583,GIIDGSPRL True True GIIDGSPRL 64.169807 464.266955554485 25323628.0 12579.0 nc|ENSG00000102445|Q9H714-2|RUBCNL;;ENSG00000102445|ENST00000429979|RUBCNL;;nc|ENSG00000102445|Q9H714-1|RUBCNL;;chr13:46344831-46349286|46|25.39|0.99|4.68|-|ENST00000417405|RUBCNL,RUBCNL;;nc|ENSG00000102445|Q9H714-4|RUBCNL 4.812705993652344 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12584 64.176 330.0 461240.0 25 0 105420.0 + 15858 ISNPGLDQAQV 11 152 381.20020002775817 0 381.2003051638603 PEAK CID FTMS 0 0 0 12579 508425.0625 1.0 0 0.0 5 Unmodified _ISNPGLDQAQV_ REV__ENSG00000189184|ENST00000344876|PCDH18;REV__nc|ENSG00000189184|Q9HCL0-2|PCDH18 2.498486711656943 0.4761840153648598 3 Q 1 -1 5.2165 0.0 0.0 0.68604 0.0 0.0 544.2703818896977 85.0302981012328 629.3006799909305 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Q 0.68604 + + 2 + 1 1.186 123814.6 1.0 7150 5432 12579 HBL1_DMSO_200M_050219_1,12584 HBL1_DMSO_200M_050219_1,12584,ISNPGLDQAQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12585 64.182 369.0 197460.0 25 0 26275.0 + 34936 SQITAIEAQHL 11 108 605.8252778931001 1209.636002853 2 605.8260375857353 MULTI CID FTMS 0 0 0 12579 202118.875 0.1562662842713846 -4 0.1996994018554687 6 Unmodified _SQITAIEAQHL_ ENSG00000104812|ENST00000323798|GYS1;nc|ENSG00000104812|P13807-2|GYS1 62.86856922530385 0.057503257068159 3 {[QS]|[NT]}{I|L}TA{I|L}EAQ[H{I|L}] 11 0 + 91.317 0.0 0.0 7.5492 7.5492 94.906 0.0 0.0 0.0 64.36237014169915 7.367585652254178 7.367585652254178 17.935695106011835 0 1.3494850021680094 0.8538719643217619 0.8494850021680094 0.8807196863200843 + + {[QS]|[NT]}{I|L}TA{I|L}EAQ[H{I|L}];{[QS]|[NT]}{I|L}TA{I|L}EA[AG][H{I|L}];{[QS]|[NT]}{I|L}TA{I|L}N[DV][H{I|L}];{[QS]|[NT]}{I|L}TA{I|L}N[PG]NPV;{[QS]|[NT]}{I|L}TA{I|L}N{I|L}[HD]V;{[QS]|[NT]}{I|L}TA{I|L}GG[DV][H{I|L}];{[QS]|[NT]}{I|L}TA{I|L}N[PG]GGPV;{[QS]|[NT]}{I|L}TA{I|L}GG[PG]NPV;{[QS]|[NT]}{I|L}TA{I|L}GG{I|L}[HD]V 7.5492;6.0664;5.5056;4.9502;4.9193;4.4362;4.1981;4.1981;3.8499 +;-;-;-;-;-;-;-;- + 1330 + 1 1.186 58312.4 1.0 7151 5432 12579 HBL1_DMSO_200M_050219_1,12585 HBL1_DMSO_200M_050219_1,12585,SQITAIEAQHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12587 64.187 0.71 94154000.0 25 0 13245000.0 24034 LWALLVYNA 9 59 531.8007244008267 1061.5868958684532 2 531.8015624880791 MULTI CID FTMS 0 0 0 12586 94791672.0 0.9229052494166105 -3 0.1141433715820312 1 Unmodified _LWALLVYNA_ ENSG00000112414|ENST00000367609|ADGRG6;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6 24.67388899826682 0.2172451872415813 3 VVY{[QG]|[NA]} 5 5 30.713 0.0 0.0 2.8932 0.0 0.0 497.2979805477186 0.0 497.2979805477186 0.0 19.45427765287466 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 VVY{[QG]|[NA]} 2.8932 - 31 1 1.186 57986.4 1.0 7152 5433 12586 HBL1_DMSO_200M_050219_1,12587 HBL1_DMSO_200M_050219_1,12587,LWALLVYNA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12588 64.188 3.4 14949000.0 25 0 3880600.0 + 42858 VVLGPPAA 8 62 362.2226307667341 722.4307086002682 2 362.2225219607353 MULTI CID FTMS 0 0 0 12586 19290966.0 0.9327957462388792 2 -0.0762939453125 2 Unmodified _VVLGPPAA_ REV__ENST00000468758.1_1_2:134877558-135010718:+|nuORF;REV__ENST00000481801.5_1_2:134877633-135011843:+|nuORF 0.0 0.8243325171867699 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.186 45649.8 1.0 7153 5433 12586 HBL1_DMSO_200M_050219_1,12588 HBL1_DMSO_200M_050219_1,12588,VVLGPPAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12589 64.189 9.4 6431400.0 25 0 633600.0 + 44519 YPDRNLPTI 9 72 544.7897074529764 1087.5648619727526 2 544.7905151247978 MULTI CID FTMS 0 0 0 12586 6309837.0 0.868901421344626 -3 0.1141433715820312 3 Unmodified _YPDRNLPTI_ ENSG00000115539|ENST00000264254|PDCL3 67.83816525789305 0.0219346420158844 3 [TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}YPT{I|L} 9 4 + 61.99 0.0 0.0 5.6999 5.6999 85.429 0.0 0.0 0.0 18.97694955105237 15.647124887093824 15.647124887093824 8.494850021680094 0 1.274227503252014 1.3010299956639813 0.6421590589602533 0.3494850021680094 [TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}YPT{I|L};[TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}PYT{I|L};[TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}PTY{I|L};[TP]{I|L}[NP][HA]PE{I|L};[TP]{I|L}[NP][W{M(Oxidation (M))|F}]T{I|L};[TP]{I|L}[NP][RD]Y{I|L};[TP]{I|L}QQ[C(Carbamidomethyl (C))K]T{I|L};[TP]{I|L}QQ{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[WP]AAYPT{I|L};{[VA]|[{I|L}G]}[WP]AAPYT{I|L} 5.6999;4.9188;4.5728;4.3971;3.7483;3.4023;3.3096;2.9806;2.8912;2.4315 -;-;-;-;-;-;-;-;-;- 211 1 1.186 53591.4 1.0 7154 5433 12586 HBL1_DMSO_200M_050219_1,12589 HBL1_DMSO_200M_050219_1,12589,YPDRNLPTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12590 64.19 11.0 5151300.0 25 0 691410.0 + + 11114 DAFTIKTV 8 87 447.7501201777644 893.4856874223289 2 447.7504150271416 MULTI CID FTMS 0 0 0 12586 5226523.5 0.5670333715512722 3 -0.1530685424804687 4 Unmodified _GEFTIKTV_ ENSG00000115267|ENST00000649979|IFIH1 71.13359017698441 0.1103988542940256 3 {[CT]|[{M(Oxidation (M))|F}G]}ET{I|L}KTV 8 -1 + 50.865 0.0 0.0 5.6929 5.6929 90.022 0.0 0.0 0.0 23.59933543489663 8.372604566103838 8.372604566103838 25.00177667229142 0 0.6747425010840047 0.0 1.2416440611282626 0.0 {[CT]|[{M(Oxidation (M))|F}G]}ET{I|L}KTV;[K{I|L}]TTV{M(Oxidation (M))|F}{[DA]|[EG]};[K{I|L}]TVT{M(Oxidation (M))|F}{[DA]|[EG]};[K{I|L}]S{I|L}T{M(Oxidation (M))|F}{[DA]|[EG]};[K{I|L}]T{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{[DA]|[EG]};{[TV]|[{I|L}S]}K{I|L}T{M(Oxidation (M))|F}{[DA]|[EG]};[{M(Oxidation (M))|F}T][K{I|L}]{[TV]|[{I|L}S]}{[DA]|[EG]} 5.6929;2.8947;2.1124;1.7755;1.4749;0.56765;0.25218 -;-;-;-;-;-;- 192 + 1 1.186 46471.5 1.0 7155 5433 12586 HBL1_DMSO_200M_050219_1,12590 HBL1_DMSO_200M_050219_1,12590,GEFTIKTV False False DAFTIKTV 64.190079 447.750415027142 94997040.0 12586.0 ENSG00000115267|ENST00000649979|IFIH1 7.013424237569173 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12591 64.191 8.4 4525900.0 25 0 327980.0 + 9817 FPDPNVKYV 9 75 539.7821390043049 1077.5497250754097 2 539.7820922732353 MULTI CID FTMS 0 0 0 12586 5149659.5 0.8783601415771377 -3 0.1141433715820312 5 Unmodified _FPDPNVKYV_ ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF 38.17557092003332 0.0854718145212029 3 [DP]{M(Oxidation (M))|F}[NP]VK[YV] 9 2 + 40.569 0.0 0.0 3.7649 3.7649 76.955 0.0 0.0 0.0 5.740312677277181 7.147642715192504 5.740312677277181 5.740312677277181 0 1.424742501084005 1.3979400086720375 0.0 0.0 [DP]{M(Oxidation (M))|F}[NP]VK[YV];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[NP]VK[YV];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YYVK[YV];[DP]{I|L}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}K[YV] 3.7649;3.2322;2.4463;2.1195 -;+;-;- + 108 1 1.186 34063.1 1.0 7156 5433 12586 HBL1_DMSO_200M_050219_1,12591 HBL1_DMSO_200M_050219_1,12591,FPDPNVKYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12592 64.192 20.0 2196600.0 25 0 459010.0 + + 38850 TVLDKTLSV 9 63 488.2901227975792 974.5656926619585 2 488.2903015017509 MULTI CID FTMS 0 0 0 12586 2692871.5 0.8279183516106132 3 -0.1530685424804687 6 Unmodified _TVILSGSIVS_ nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 29.081581746732265 0.3152867722954398 3 {[TV]|[{I|L}S]}[VG]T{I|L}S 7 -1 45.01 0.0 0.0 4.6184 0.0 0.0 0.0 314.17158586531895 314.17158586531895 31.62031667669204 0.0 0.0 0.0 0 0.5 2.0 1.1549471895720984 0.0 {[TV]|[{I|L}S]}[VG]T{I|L}S 4.6184 - 219 1 1.186 42036.6 1.0 7157 5433 12586 HBL1_DMSO_200M_050219_1,12592 HBL1_DMSO_200M_050219_1,12592,TVILSGSIVS False False TVLDKTLSV 64.192438 488.290301501751 43358916.0 12586.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 5.132402896881104 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12593 64.196 208.0 539370.0 25 0 105970.0 -1 0 56 1091.768937297762 3272.2849824934865 3 1092.437426745892 MULTI CID FTMS 0 0 0 12586 1465414.75 0.7512724921441509 3 -0.1530685424804687 7 3 VNT{M(Oxidation (M))|F}[NP]{[NV]|[RG]} 8 -1 23.937 0.0 0.0 0.7315 0.0 0.0 2368.836509448368 0.0 2368.836509448368 0.0 17.483193732736027 0.0 0.0 0 0.0 0.0 0.0 2.0994850021680094 VNT{M(Oxidation (M))|F}[NP]{[NV]|[RG]} 0.7315 - 268 + 1 1.186 98942.1 1.0 7158 5433 12586 HBL1_DMSO_200M_050219_1,12593 HBL1_DMSO_200M_050219_1,12593, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12594 64.203 370.0 195830.0 25 0 13879.0 + 23766 LVAPEAHKVVV 11 107 581.3535417156784 1160.6925304981569 2 581.3550292849541 MULTI CID FTMS 0 0 0 12586 238655.90625 0.7375609922870344 -3 0.1141433715820312 8 Unmodified _LVAPEAHKVVV_ REV__ENSG00000066923|ENST00000615138|STAG3;REV__nc|ENSG00000292277|Q9UJ98-2|STAG3;REV__nc|ENSG00000292277|Q9UJ98-3|STAG3;REV__nc|ENSG00000292277|Q9UJ98|STAG3 10.073929032068715 0.8255972128077141 3 P 1 -1 10.837 0.0 0.0 0.93371 0.0 0.0 1045.6286933783308 0.0 1045.6286933783308 0.0 0.5598687972196625 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.93371 + + 51 + 1 1.186 57623.9 1.0 7159 5433 12586 HBL1_DMSO_200M_050219_1,12594 HBL1_DMSO_200M_050219_1,12594,LVAPEAHKVVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12595 64.212 509.0 634590.0 25 0 53559.0 -1 VGAALLCR 8 159 422.73746743950426 843.4603819458085 2 422.7374450564384 MULTI CID FTMS 0 0 0 12586 212436.0 0.8806788348373511 3 -0.1530685424804687 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VGAALLCR_ ENST00000547905.5_1_12:50419212-50419260:-|nuORF 20.871210003555333 0.6025813472596342 3 AAA[HA]K{I|L}Y 8 -1 + 46.718 0.0 0.0 5.5389 5.5389 83.083 0.0 0.0 0.0 23.03850038390734 6.232492903979008 6.232492903979008 6.232492903979008 0 0.25 1.0 0.0 0.2614393726401688 AAA[HA]K{I|L}Y;AAA[HA]KY{I|L};AAA[HA]YK{I|L};AAA[YK][HA]{I|L};[TP]{I|L}[RN]M{I|L};[TP]{I|L}[RN]{M(Oxidation (M))|F}P;[EP]A{[WT]|[RM]}K{I|L};[EP]A[RK]M{I|L};[EP]A[RK]{M(Oxidation (M))|F}P;{I|L}YRA[QP]P 5.5389;4.8;3.8774;1.4925;0.7133;0.67777;0.64349;0.38047;0.34495;0.28139 -;-;-;-;-;-;-;-;-;- 801 + 1 1.186 247548.8 1.0 7160 5433 12586 HBL1_DMSO_200M_050219_1,12595 HBL1_DMSO_200M_050219_1,12595,VGAALLCR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12596 64.221 528.0 213320.0 25 0 26458.0 24290 MAVLESLRVII 11 129 415.2541005508996 0 415.2549011111259 PEAK CID FTMS 0 0 0 12586 195675.390625 1.0 0 0.0 10 Unmodified _MAVLESLRVII_ ENSG00000172053|ENST00000306125|QARS1;ENST00000470113.2_1_3:49135784-49136686:-|nuORF;nc|ENSG00000172053|P47897-2|QARS1 5.40270961882225 0.47618401536486 3 {I|L}V 2 9 7.9588 0.0 0.0 0.96064 0.0 0.0 201.08540027495548 412.23598020664815 613.3213804816037 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 0.96064 - 14 + 1 1.186 92428.1 1.0 7161 5433 12586 HBL1_DMSO_200M_050219_1,12596 HBL1_DMSO_200M_050219_1,12596,MAVLESLRVII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12598 64.231 459.0 149170.0 25 0 19073.0 + -1 SALPSLPVG 9 80 840.4838662641804 0 840.4835082888603 PEAK CID FTMS 0 0 0 12597 78048.515625 0.3358808638472498 3 -0.1898651123046875 1 ENSG00000159224|ENST00000357424|GIP 3 TVA{I|L}T 5 -1 38.672 0.0 0.0 2.3033 0.0 0.0 1009.5818802714214 181.0626619928344 1190.6445422642555 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6989700043360187 0.0 TVA{I|L}T 2.3033 - 321 + 1 1.186 51568.3 1.0 7162 5434 12597 HBL1_DMSO_200M_050219_1,12598 HBL1_DMSO_200M_050219_1,12598, False False SALPSLPVG 64.231369 840.48350828886 4930715.0 12597.0 ENSG00000159224|ENST00000357424|GIP 0.2250351508458455 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12599 64.233 90.0 396980.0 25 0 34208.0 + 16218 IVLHGHRL 8 63 472.7927918627518 943.5710307923036 2 473.7971069216728 MULTI CID FTMS 0 0 0 12597 578699.125 0.7802018591670824 -1 0.0389022827148437 2 Unmodified _IVLHGHRL_ REV__ENSG00000150893|ENST00000280481|FREM2;REV__nc|ENSG00000150893|Q5SZK8-2|FREM2 6.354104778181461 0.7857632046190106 3 {I|L} 1 -1 10.379 0.0 0.0 1.0999 0.0 0.0 812.4756156085131 0.0 812.4756156085131 0.0 1.706465878406183 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0999 + + 26 + 1 1.186 35457.6 1.0 7163 5434 12597 HBL1_DMSO_200M_050219_1,12599 HBL1_DMSO_200M_050219_1,12599,IVLHGHRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12600 64.236 142.0 552260.0 25 0 97796.0 + 21095 LPAHSILI 8 90 432.2712558009679 862.5279586687358 2 432.2705261111259 MULTI CID FTMS 0 0 0 12597 367243.0 0.1605597071614929 -4 0.153045654296875 3 Unmodified _LPAHSILI_ REV__ENST00000573807.5_1_17:7216077-7216773:-|nuORF 36.46614268402704 0.2934124525509074 3 [YR]SV{I|L}{I|L}{I|L} 7 -1 + 36.783 0.0 0.0 4.2645 4.2645 77.706 0.0 0.0 0.0 6.777807052660805 22.17879772898371 6.777807052660805 4.956130378462476 0 0.6237125054200234 0.0 1.1549471895720984 0.0 [YR]SV{I|L}{I|L}{I|L};[YR]VS{I|L}{I|L}{I|L};[YR]S{I|L}V{I|L}{I|L};[YR]VTV{I|L}{I|L} 4.2645;3.6899;3.2189;2.6443 -;-;-;- 166 1 1.186 66965.4 1.0 7164 5434 12597 HBL1_DMSO_200M_050219_1,12600 HBL1_DMSO_200M_050219_1,12600,LPAHSILI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12601 64.244 434.0 413950.0 25 0 57800.0 + 1638 ALMKEKIEL 9 162 358.87955355221817 1073.6168312568543 3 358.8790161013603 MULTI CID FTMS 0 0 0 12597 358709.59375 0.808197553054148 -1 0.0389022827148437 4 Unmodified _ALMKEKIEL_ REV__ENSG00000165325|ENST00000298050|DEUP1;REV__nc|ENSG00000165325|Q05D60-2|DEUP1 23.78978130925829 0.2284941198415988 3 [VS]{M(Oxidation (M))|F}{I|L}K[HC]K{I|L} 9 -1 + 34.402 0.0 0.0 3.2043 3.2043 67.81 0.0 0.0 0.0 -23.042811858021672 0.0881915389386094 -23.042811858021672 0.3966792022085741 0 0.0 0.8538719643217619 0.0 0.0 [VS]{M(Oxidation (M))|F}{I|L}K[HC]K{I|L};[{I|L}A][W{I|L}]Q{M(Oxidation (M))|F}{I|L}A{I|L};[{I|L}A][YV]K[HC]K{I|L};[K{I|L}]EEKM{I|L}A{I|L};[VS]{M(Oxidation (M))|F}K{I|L}[HC]K{I|L};[VS]{M(Oxidation (M))|F}R[EP]VK{I|L};[RV]{I|L}DQ{M(Oxidation (M))|F}{I|L}A{I|L};[VS]{M(Oxidation (M))|F}{I|L}K[HC]{I|L}K;[K{I|L}]EEK{I|L}{M(Oxidation (M))|F}[PA];[{I|L}A][YV]K[HC]{I|L}K 3.2043;3.1674;3.1604;2.6591;2.6436;2.4795;2.4553;2.4534;2.4102;2.4095 -;-;-;-;-;-;-;-;-;- 1260 + 1 1.186 146074.7 1.0 7165 5434 12597 HBL1_DMSO_200M_050219_1,12601 HBL1_DMSO_200M_050219_1,12601,ALMKEKIEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12602 64.252 433.0 196520.0 25 0 14863.0 + 2920 AVGLVDPLS 9 128 435.7512825346927 869.4880121361854 2 436.7567932009697 MULTI CID FTMS 0 0 0 12597 312961.84375 0.8610653509286298 12 -0.984100341796875 5 Unmodified _AVGLVDPLS_ REV__ENSG00000008516|ENST00000336577|MMP25;REV__ENST00000570755.1_1_16:3097544-3105874:+|nuORF 11.640296217721598 0.521594087909532 3 V 1 -1 12.218 0.0 0.0 1.4053 0.0 0.0 752.4083669108909 0.0 752.4083669108909 0.0 0.9594276311945648 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4053 + + 126 + 1 1.186 67942.3 1.0 7166 5434 12597 HBL1_DMSO_200M_050219_1,12602 HBL1_DMSO_200M_050219_1,12602,AVGLVDPLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12603 64.259 396.0 276320.0 25 0 17404.0 + 19667 LGKVGLSP 8 92 770.4767382439534 769.4694617773533 1 770.4769164919853 MULTI CID FTMS 0 0 0 12597 294817.6875 0.0387866234829574 14 -1.158416748046875 6 Unmodified _LGKVGLSP_ ENST00000566655.1_1_16:70820075-70820303:-|nuORF 70.71552829651908 0.111000043122623 3 {[VA]|[{I|L}G]}VGVGVAV 9 5 + 60.605 0.0 0.0 7.8762 7.8762 83.12 0.0 0.0 0.0 17.191512336730028 35.85068722362634 17.191512336730028 1.2811987749595346 0 0.8243923658886186 1.154901959985743 0.0 0.0 {[VA]|[{I|L}G]}VGVGVAV;{[VA]|[{I|L}G]}VGVG{I|L}GV;{[VA]|[{I|L}G]}GVVGVAV;{[VA]|[{I|L}G]}VGVGAVV;{[VA]|[{I|L}G]}VGVVGAV;{[VA]|[{I|L}G]}GVVG{I|L}GV;{[VA]|[{I|L}G]}VGVVAGV;{[VA]|[{I|L}G]}GVVGAVV;{[VA]|[{I|L}G]}GVVVGAV;{[VA]|[{I|L}G]}GVVVAGV 7.8762;7.7097;7.6474;7.5988;7.5553;7.4809;7.3888;7.3699;7.3265;7.16 -;-;-;-;-;-;-;-;-;- 3134 1 1.186 80116.5 1.0 7167 5434 12597 HBL1_DMSO_200M_050219_1,12603 HBL1_DMSO_200M_050219_1,12603,LGKVGLSP True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12605 64.263 0.77 78710000.0 25 0 10932000.0 -1 0 57 366.7365590087173 731.4585650842347 2 366.7366210818291 MULTI CID FTMS 0 0 0 12604 73664272.0 0.955898843686409 -1 0.0373916625976562 1 3 [{I|L}V]PK{I|L}Y 6 -1 + 49.001 0.0 0.0 6.6991 6.6991 94.118 0.0 0.0 0.0 24.61590378578109 11.38190082242268 11.38190082242268 49.001378994909146 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK{I|L}Y 6.6991 - 47 + 1 1.171 55102.7 1.0 7168 5435 12604 HBL1_DMSO_200M_050219_1,12605 HBL1_DMSO_200M_050219_1,12605, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12606 64.264 8.4 6748300.0 25 0 1376800.0 + 5005 DGVAVLKV 8 66 400.7475608434541 799.4805687537081 2 400.7475768923759 MULTI CID FTMS 0 0 0 12604 7398140.0 0.8390929619829349 2 -0.1524734497070312 2 Unmodified _DGVAVLKV_ ENSG00000144381|ENST00000388968|HSPD1;ENST00000388966.4_1_12:8169981-8170332:-|nuORF;ENST00000530524.1_1_8:7748917-7749049:-|nuORF 34.10243960390752 0.3329570729325616 3 [VG]DAV{I|L}KV 8 2 [VG]D + + 38.148 18.161 6.6985 4.7716 4.7716 54.878 0.0 0.0 0.0 0.0 22.4178699783384 0.0 0.0 0 0.805462187404089 0.0 0.0 0.2134679910804404 [VG]DAV{I|L}KV 4.7716 - 100 + 1 1.171 51907.0 1.0 7169 5435 12604 HBL1_DMSO_200M_050219_1,12606 HBL1_DMSO_200M_050219_1,12606,DGVAVLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12607 64.265 1.9 17776000.0 25 0 2682700.0 + 43629 YALNHTLSV 9 61 509.2715176128346 1016.5284822924692 2 509.2719909548759 MULTI CID FTMS 0 0 0 12604 29112364.0 0.9429285325336724 -1 0.0373916625976562 3 Unmodified _YALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 39.94969957227396 0.0757326808254658 3 YA 2 7 44.776 0.0 0.0 4.4048 0.0 0.0 0.0 779.405674160249 779.405674160249 14.61127163555986 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + YA 4.4048 + + 83 + 1 1.171 32109.2 1.0 7170 5435 12604 HBL1_DMSO_200M_050219_1,12607 HBL1_DMSO_200M_050219_1,12607,YALNHTLSV True True YALNHTLSV 64.265191 509.271990954876 745427040.0 12604.0 ENSG00000110777|ENST00000393067|POU2AF1 6.061627546946208 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12608 64.266 22.0 2049200.0 25 0 312040.0 + 5979 DQYPYLKSV 9 71 556.7848697670498 1111.5551866008996 2 556.7853881716728 MULTI CID FTMS 0 0 0 12604 2383138.25 0.6759238709386473 5 -0.4195327758789062 4 Unmodified _DQYPYLKSV_ ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF 20.41453444215458 0.284085796332423 3 YK{I|L}QN 5 7 38.443 0.0 0.0 3.4585 0.0 0.0 447.1977169737496 0.0 447.1977169737496 0.0 20.76728783671072 0.0 0.0 0 0.0 0.0 0.0 0.5 YK{I|L}QN 3.4585 - 133 + 1 1.171 41792.7 1.0 7171 5435 12604 HBL1_DMSO_200M_050219_1,12608 HBL1_DMSO_200M_050219_1,12608,DQYPYLKSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12609 64.268 19.0 1251500.0 25 0 133610.0 -1 DAMKYTIVV 9 55 528.2751451395659 1054.5357373459317 2 528.2771484255791 MULTI CID FTMS 0 0 0 12604 2359985.75 0.40905708998149 5 -0.4195327758789062 5 Oxidation (M) _DAM(Oxidation (M))KYTIVV_ ENSG00000152234|ENST00000398752|ATP5F1A;nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A 26.88365393820708 0.1891292719743517 3 VV 2 -1 22.206 0.0 0.0 2.1058 0.0 0.0 838.3874199404614 0.0 838.3874199404614 0.0 14.75895023531386 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 VV 2.1058 + + 14 + 1 1.171 30735.5 1.0 7172 5435 12604 HBL1_DMSO_200M_050219_1,12609 HBL1_DMSO_200M_050219_1,12609,DAMKYTIVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12610 64.269 66.0 1674800.0 25 0 280210.0 + 44592 YPFKPPKI 8 98 330.5321852651292 988.5747263955876 3 330.5322143435478 MULTI CID FTMS 0 0 0 12604 1331154.25 0.0761000586662892 -17 0.9215660095214844 6 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 53.542 0.0 0.0 5.4161 5.4161 86.943 0.0 0.0 0.0 18.927900303521312 7.33410649039925 7.33410649039925 10.457574905606748 0 0.0 1.2218487496163564 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 5.4161;4.3583 +;- + 150 + 1 1.171 93939.4 1.0 7173 5435 12604 HBL1_DMSO_200M_050219_1,12610 HBL1_DMSO_200M_050219_1,12610,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12611 64.272 114.0 659080.0 25 0 58111.0 + 4181 DAPIVAHL 8 83 418.23718703814194 834.4598211430839 2 418.2368041872978 MULTI CID FTMS 0 0 0 12604 686267.375 0.068737714540125 7 -0.540985107421875 7 Unmodified _DAPIVAHL_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 30.19836241096484 0.408853459428176 3 {[DA]|[EG]}P{I|L}VAH{I|L} 8 0 + 61.217 0.0 0.0 7.3361 7.3361 96.1 0.0 0.0 0.0 34.0500233001784 10.511303656960784 10.511303656960784 61.2170110131429 0 0.3494850021680094 2.0 0.0 0.0 + + {[DA]|[EG]}P{I|L}VAH{I|L} 7.3361 + + 83 + 1 1.171 68756.8 1.0 7174 5435 12604 HBL1_DMSO_200M_050219_1,12611 HBL1_DMSO_200M_050219_1,12611,DAPIVAHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12612 64.277 280.0 707780.0 25 0 59304.0 + 16176 IVDNTTMQL 9 197 517.7622790343296 1033.510005135459 2 517.7632324099541 MULTI CID FTMS 0 0 0 12604 685978.6875 0.3349057651595642 5 -0.4195327758789062 8 Unmodified _IVDNTTMQL_ ENSG00000067829|ENST00000217901|IDH3G;nc|ENSG00000067829|P51553-2|IDH3G 78.14939416004806 0.0179651292570206 3 [PS]NDV{I|L}VA[YG] 10 9 + 29.329 0.0 0.0 2.8378 2.8378 49.875 0.0 0.0 0.0 0.5976758947767493 -3.388185565533817 -3.388185565533817 0.0 0 0.0 0.9208187539523752 0.8807196863200843 0.3054621874040891 [PS]NDV{I|L}VA[YG];[PS]ND{I|L}VVA[YG];[PS]DNV{I|L}VA[YG];[PS]DN{I|L}VVA[YG];[{I|L}V]D{[QS]|[NT]}TMQ{I|L};[{I|L}V]D[C(Carbamidomethyl (C))R]MQ{I|L};[DP]SN{I|L}VVA[YG];[DP]SNV{I|L}VA[YG];[HA][HV]QAMQ{I|L};{[RE]|[WV]}{[WT]|[RM]}AMQ{I|L} 2.8378;2.8378;2.8378;2.8378;2.6209;2.5891;2.5129;2.5129;2.4317;2.0466 -;-;-;-;+;-;-;-;-;- + 3049 1 1.171 151507.6 1.0 7175 5435 12604 HBL1_DMSO_200M_050219_1,12612 HBL1_DMSO_200M_050219_1,12612,IVDNTTMQL True True IVDNTTMQL 64.276687 517.763232409954 11117711.0 12604.0 ENSG00000067829|ENST00000217901|IDH3G;;nc|ENSG00000067829|P51553-2|IDH3G 3.954495350519816 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12613 64.278 67.0 1201800.0 25 0 89712.0 -1 LMIPRAMR 8 116 502.281408599106 0 502.2820007205009 PEAK CID FTMS 0 0 0 12604 530258.5625 0.8186014626330965 -1 0.0373916625976562 9 Oxidation (M) _LMIPRAM(Oxidation (M))R_ ENST00000367815.8_1_1:169094151-169094205:+|nuORF 13.50788311687929 0.5021269579892848 3 P{M(Oxidation (M))|F}EP 4 -1 21.414 0.0 0.0 2.136 0.0 0.0 113.07975242382572 416.2386263483032 529.3183787721289 0.0 0.0 0.0 0.0 0 0.1861818737241735 0.0 0.0 0.0 P{M(Oxidation (M))|F}EP 2.136 - 89 + 1 1.171 63061.0 1.0 7176 5435 12604 HBL1_DMSO_200M_050219_1,12613 HBL1_DMSO_200M_050219_1,12613,LMIPRAMR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12614 64.285 367.0 560390.0 25 0 27096.0 + 31257 RLVKDVFISA 10 186 574.3452394481308 1146.6759259630614 2 574.3461791872978 MULTI CID FTMS 0 0 0 12604 309981.28125 1.0 0 0.0 10 Unmodified _RLVKDVFISA_ ENSG00000008018|ENST00000262193|PSMB1 18.3397198061782 0.5398193257859029 3 [{I|L}V]RKDV{M(Oxidation (M))|F}{I|L}SA 10 2 + 49.733 0.0 0.0 4.3372 4.3372 75.171 0.0 0.0 0.0 7.939455175668755 5.994850021680094 5.994850021680094 3.0102999566398125 0 0.7887254899964358 0.8239087409443188 0.3252574989159953 0.0 [{I|L}V]RKDV{M(Oxidation (M))|F}{I|L}SA;[{I|L}V]RKD{M(Oxidation (M))|F}V{I|L}SA;[{I|L}V]RKDV{M(Oxidation (M))|F}S{I|L}A;[{I|L}V]RKDV{I|L}{M(Oxidation (M))|F}SA;[{I|L}V]RKD{M(Oxidation (M))|F}VS{I|L}A;[{I|L}V]RKSV{M(Oxidation (M))|F}{I|L}DA;[{I|L}V]R[WR]{M(Oxidation (M))|F}{I|L}SA;[{I|L}V]RKSV{I|L}{M(Oxidation (M))|F}DA;[{I|L}V]RKDVS{M(Oxidation (M))|F}{I|L}A;[{I|L}V]R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RV{I|L}SA 4.3372;4.0747;3.4267;3.3857;3.1641;2.5975;2.5273;2.4862;2.3216;2.246 -;-;-;-;-;-;-;-;-;- 1886 1 1.171 154326.7 1.0 7177 5435 12604 HBL1_DMSO_200M_050219_1,12614 HBL1_DMSO_200M_050219_1,12614,RLVKDVFISA False True RLVKDVFISA 64.284891 574.346179187298 7984423.5 12604.0 ENSG00000008018|ENST00000262193|PSMB1 5.130590597788493 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12615 64.292 414.0 167180.0 25 0 26593.0 -1 0 88 622.4009558264846 621.3936793598846 1 622.4024536013603 MULTI CID FTMS 0 0 0 12604 246209.953125 0.5242634381159059 -4 0.136810302734375 11 3 {M(Oxidation (M))|F} 1 -1 9.6777 0.0 0.0 1.5574 0.0 0.0 456.3146673743361 0.0 456.3146673743361 0.0 9.67771005386541 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.5574 - 16 + 1 1.171 60574.1 1.0 7178 5435 12604 HBL1_DMSO_200M_050219_1,12615 HBL1_DMSO_200M_050219_1,12615, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12616 64.301 502.0 883470.0 25 0 101690.0 2016 APENYGHG 8 214 422.6824347733221 843.3503166134442 2 422.6831237673759 MULTI CID FTMS 0 0 0 12604 238489.71875 0.4431827631638853 -1 0.0373916625976562 12 Unmodified _APENYGHG_ ENSG00000042832|ENST00000220616|TG;nc|ENSG00000042832|P01266-2|TG 2.577480529830294 0.808687252328423 3 AA[HA]K{I|L}Y 7 7 22.317 0.0 0.0 2.6462 0.0 0.0 70.9250758656428 0.0 70.9250758656428 0.0 6.151710812871386 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 AA[HA]K{I|L}Y 2.6462 - 830 + 1 1.171 339308.0 1.0 7179 5435 12604 HBL1_DMSO_200M_050219_1,12616 HBL1_DMSO_200M_050219_1,12616,APENYGHG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12617 64.309 470.0 477550.0 25 0 30962.0 -1 IILMPQVQ 8 244 479.2774038569007 956.5402547806012 2 479.2751953005791 MULTI CID FTMS 0 0 0 -1 0 13 Oxidation (M) _IILM(Oxidation (M))PQVQ_ ENSG00000167447|ENST00000300917|SMG8;nc|ENSG00000167447|Q8ND04-2|SMG8 20.871210003555333 0.6025813472596342 3 [VG]AEP 5 -1 15.45 0.0 0.0 1.6152 0.0 0.0 0.0 500.2934340621045 500.2934340621045 2.289332277134612 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [VG]AEP 1.6152 - 1340 1 1.171 169096.6 1.0 7180 5435 12604 HBL1_DMSO_200M_050219_1,12617 HBL1_DMSO_200M_050219_1,12617,IILMPQVQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12618 64.317 434.0 561020.0 25 0 51327.0 + -1 NYLITVSCV 9 232 534.7732229410419 1067.5318929488838 2 534.7748290896416 MULTI CID FTMS 0 0 0 -1 0 14 Carbamidomethyl (C) _NYLITVSC(Carbamidomethyl (C))V_ REV__ENST00000261489.6_2_13:45008072-45008132:-|nuORF 24.020572477871973 0.2255576514309169 3 [YN]{I|L} 3 -1 27.976 0.0 0.0 2.6206 0.0 0.0 0.0 674.3185545575899 674.3185545575899 3.440359212109449 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 [YN]{I|L} 2.6206 + + 2821 1 1.171 189089.4 1.0 7181 5435 12604 HBL1_DMSO_200M_050219_1,12618 HBL1_DMSO_200M_050219_1,12618,NYLITVSCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12619 64.326 486.0 289720.0 25 0 28668.0 + -1 LVSAKCVAL 9 182 480.7828707948629 959.5511886565256 2 480.7841674685478 MULTI CID FTMS 0 0 0 12604 172563.171875 0.0369700205499489 -17 0.9215660095214844 15 Carbamidomethyl (C) _LVSAKC(Carbamidomethyl (C))VAL_ REV__ENST00000372179.7_1_9:135042013-135042139:+|nuORF 16.942295170755138 0.3780752226737986 3 [{I|L}V]N 3 -1 17.905 0.0 0.0 1.866 0.0 0.0 0.0 630.3336342954507 630.3336342954507 -1.393022448505885 0.0 -1.393022448505885 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}V]N 1.866 - 827 1 1.171 109468.2 1.0 7182 5435 12604 HBL1_DMSO_200M_050219_1,12619 HBL1_DMSO_200M_050219_1,12619,LVSAKCVAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12620 64.336 484.0 112160.0 25 0 7585.3 + 31535 RQKRRRRRML 10 94 728.4521972537041 0 728.4521972537041 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _RQKRRRRRML_ REV__ENSG00000167543|ENST00000301057|TP53I13;REV__ENST00000579674.1_1_17:27898877-27899117:+|nuORF 0.4583401331227399 0.3961065659209837 3 {I|L}P 2 -1 8.5835 0.0 0.0 0.58998 0.0 0.0 1116.657063439043 125.0726259820922 1241.7296894211352 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}P 0.58998 - 58 + 1 1.171 43490.5 1.0 7183 5435 12604 HBL1_DMSO_200M_050219_1,12620 HBL1_DMSO_200M_050219_1,12620,RQKRRRRRML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12622 64.34 5.2 6194800.0 25 0 656970.0 + -1 RIADQFLGA 9 68 495.77250745288194 989.530461972564 2 495.7724792361259 MULTI CID FTMS 0 0 0 12621 4895437.5 0.1065259957212364 6 -0.4642105102539062 1 Oxidation (M) _M(Oxidation (M))LVSAGRLGA_ ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A 18.1463463914782 0.5430639438673815 3 Q{M(Oxidation (M))|F}{I|L}Q 4 -1 36.186 0.0 0.0 3.6568 0.0 0.0 455.2506275861344 0.0 455.2506275861344 0.0 20.70107520596089 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Q{M(Oxidation (M))|F}{I|L}Q 3.6568 - 206 1 1.163 33992.5 1.0 7184 5436 12621 HBL1_DMSO_200M_050219_1,12622 HBL1_DMSO_200M_050219_1,12622,MLVSAGRLGA False False RIADQFLGA 64.339612 495.772479236126 531615200.0 12621.0 ENSG00000004487|ENST00000400181|KDM1A;;nc|ENSG00000004487|O60341|KDM1A 4.4209043979644775 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12623 64.341 5.3 10310000.0 25 0 1006500.0 19684 LGLRPLHQL 9 79 349.55396087683255 1045.6400532306975 3 349.5539428591728 MULTI CID FTMS 0 0 0 12621 9690379.0 0.3751178826681799 -4 0.1733474731445312 2 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 30.22481116460888 0.1466181017706357 3 {[VA]|[{I|L}G]}{I|L}E 4 6 41.075 0.0 0.0 3.9282 0.0 0.0 0.0 630.3854322355527 630.3854322355527 21.901260307779808 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.2887254899964357 0.0 {[VA]|[{I|L}G]}{I|L}E 3.9282 - 77 + 1 1.163 51474.0 1.0 7185 5436 12621 HBL1_DMSO_200M_050219_1,12623 HBL1_DMSO_200M_050219_1,12623,LGLRPLHQL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12624 64.342 33.0 5042200.0 25 0 1403100.0 + -1 LRDLVKMRM 9 62 597.3265125373971 1192.638472141594 2 597.3273193240166 MULTI CID FTMS 0 0 0 12621 1863896.5 0.915519537990614 -1 0.0767745971679687 3 2 Oxidation (M) _LRDLVKM(Oxidation (M))RM(Oxidation (M))_ REV__ENST00000395925.7_1_7:42187938-42262752:-|nuORF 13.90604991867851 0.4602628045680013 3 RV 2 -1 20.005 0.0 0.0 1.6774 0.0 0.0 0.0 934.4490450494748 934.4490450494748 2.5700718090006056 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 RV 1.6774 - 17 + 1 1.163 131853.7 1.0 7186 5436 12621 HBL1_DMSO_200M_050219_1,12624 HBL1_DMSO_200M_050219_1,12624,LRDLVKMRM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12625 64.343 29.0 1195700.0 25 0 86348.0 + 40609 VLAGNFYSMV 10 64 550.77568873716 1099.5368245411198 2 550.7761108279228 MULTI CID FTMS 0 0 0 12621 1551188.75 0.4863455734221127 6 -0.4642105102539062 4 Unmodified _VLAGNFYSMV_ REV__ENST00000543273.5_1_7:99800189-99821208:-|nuORF 21.74664581756881 0.480091245866545 3 MV 2 -1 17.518 0.0 0.0 1.5932 0.0 0.0 851.4162628729542 0.0 851.4162628729542 0.0 3.5387196432176182 0.0 0.0 0 0.5 0.0 0.0 0.0 MV 1.5932 + + 54 + 1 1.163 35037.0 1.0 7187 5436 12621 HBL1_DMSO_200M_050219_1,12625 HBL1_DMSO_200M_050219_1,12625,VLAGNFYSMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12626 64.344 37.0 1652600.0 25 0 275780.0 + 6537 EALGTALKV 9 81 451.2698873296299 900.5252217260598 2 451.2712280154228 MULTI CID FTMS 0 0 0 12621 1500498.25 0.271690102719077 9 -0.7655792236328125 5 Unmodified _EALGTALKV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 47.74868867922204 0.0453060283459952 3 {[CP]|[EA]}{I|L}GTA{I|L}KV 9 0 + 47.348 0.0 0.0 5.2578 5.2578 87.361 0.0 0.0 0.0 35.60402823752675 12.587418566968154 12.587418566968154 14.436974992327125 0 0.0 0.0 0.9247425010840048 0.2059771852360797 + + {[CP]|[EA]}{I|L}GTA{I|L}KV;{[CP]|[EA]}{I|L}[QT]{I|L}KV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[NP]{I|L}KV;{[MS]|[{M(Oxidation (M))|F}A]}[RP]A{I|L}KV;{[CP]|[EA]}{I|L}[WR]KV;{[CP]|[EA]}[WR]{I|L}KV 5.2578;3.6547;2.6278;2.4322;2.2503;1.916 +;-;-;-;-;- + 129 + 1 1.163 52228.1 1.0 7188 5436 12621 HBL1_DMSO_200M_050219_1,12626 HBL1_DMSO_200M_050219_1,12626,EALGTALKV True True EALGTALKV 64.344326 451.271228015423 15950971.0 12621.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 6.071581522623698 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12627 64.346 55.0 1053600.0 25 0 189630.0 + 18078 KTGAVNRPA 9 85 457.2640638459234 912.5135747586468 2 457.2638732790947 MULTI CID FTMS 0 0 0 12621 989551.9375 0.5457487671661242 24 -1.9679946899414065 6 Unmodified _KTGAVNRPA_ REV__ENST00000337304.2_1_22:39916921-39917209:+|nuORF 3.944395688203298 0.7769873103969335 3 {I|L} 1 -1 10.379 0.0 0.0 1.1374 0.0 0.0 781.4185410445829 0.0 781.4185410445829 0.0 10.37860356969059 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1374 - 6 + 1 1.163 51940.5 1.0 7189 5436 12621 HBL1_DMSO_200M_050219_1,12627 HBL1_DMSO_200M_050219_1,12627,KTGAVNRPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12628 64.347 2.1 18095000.0 25 0 2733700.0 + 4838 DFKKHRSV 8 63 508.78500561562765 1015.5554582980552 2 508.7850524783134 MULTI CID FTMS 0 0 0 12621 932017.0625 0.023125108179856 -4 0.1733474731445312 7 Unmodified _DFKKHRSV_ REV__ENSG00000183098|ENST00000377047|GPC6 10.183394434864962 0.7604730176254005 3 [HN]{I|L}T{I|L}SAY 8 -1 27.349 0.0 0.0 2.693 0.0 0.0 0.0 113.07783313619908 113.07783313619908 7.147547535283749 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 [HN]{I|L}T{I|L}SAY 2.693 - 257 1 1.163 33182.0 1.0 7190 5436 12621 HBL1_DMSO_200M_050219_1,12628 HBL1_DMSO_200M_050219_1,12628,DFKKHRSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12629 64.348 34.0 1553300.0 25 0 229820.0 + 26114 NPPLKLSL 8 76 441.2767259766744 880.5388990201488 2 441.2783386111259 MULTI CID FTMS 0 0 0 12621 918228.0625 0.445415338200559 5 -0.3935317993164062 8 Unmodified _NPPLKLSL_ REV__CON__ENSEMBL:ENSBTAP00000024146;REV__ENSG00000175899|ENST00000318602|A2M;REV__ENST00000462568.1_1_12:9232657-9243123:-|nuORF 21.74664581756881 0.5868176546531598 3 NP 2 -1 33.175 0.0 0.0 3.7676 0.0 0.0 0.0 666.4204805963499 666.4204805963499 9.87456922954955 0.0 0.0 0.0 0 0.2742275032520141 1.3979400086720375 0.0 0.0 NP 3.7676 + + 209 + 1 1.163 49749.8 1.0 7191 5436 12621 HBL1_DMSO_200M_050219_1,12629 HBL1_DMSO_200M_050219_1,12629,NPPLKLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12630 64.35 80.0 965860.0 25 0 94040.0 + 26844 PASLSPVSI 9 100 435.7512825346927 869.4880121361854 2 435.7505370974541 MULTI CID FTMS 0 0 0 12621 751333.625 0.8009569103827642 -1 0.0767745971679687 9 Unmodified _PASLSPVSI_ REV__ENSG00000060237|ENST00000315939|WNK1;REV__ENST00000537603.1_1_12:1009646-1017230:+|nuORF;REV__ENST00000542424.1_1_12:1005827-1009868:+|nuORF;REV__nc|ENSG00000060237|Q9H4A3-2|WNK1;REV__nc|ENSG00000060237|Q9H4A3-4|WNK1;REV__nc|ENSG00000060237|Q9H4A3-5|WNK1;REV__nc|ENSG00000060237|Q9H4A3-6|WNK1;REV__nc|ENSG00000060237|Q9H4A3-7|WNK1 42.09456458481378 0.0639583784996157 3 [PA]TVSP{I|L}SV 9 -1 + 29.892 0.0 0.0 3.4379 3.4379 72.131 0.0 0.0 0.0 2.7053475850297914 4.965603712041332 2.7053475850297914 2.7053475850297914 0 0.1965836748594611 0.6777807052660807 1.424742501084005 0.0 [PA]TVSP{I|L}SV;[PS]{I|L}ASP{I|L}SV;{[TV]|[{I|L}S]}PASP{I|L}SV;[VG]PA{NN|[MP]|[D{I|L}]|[EV]}{I|L}SV;[VG][{I|L}A]DP{I|L}SV;[PA]KQQ{I|L}SV;[PS][PA]{[TV]|[{I|L}S]}{I|L}SV;[PA][VG]{NN|[MP]|[D{I|L}]|[EV]}{I|L}SV;[PA][PS]{[TV]|[{I|L}S]}{I|L}SV 3.4379;3.1268;2.4319;1.4769;1.0831;0.68668;0.66292;0.32202;0.14387 -;-;-;-;-;-;-;-;- 260 1 1.163 64478.6 1.0 7192 5436 12621 HBL1_DMSO_200M_050219_1,12630 HBL1_DMSO_200M_050219_1,12630,PASLSPVSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12631 64.352 79.0 980080.0 25 0 125540.0 + 40425 VIIDDHPEVTV 11 70 618.827593301693 1235.640633670186 2 618.8276855349541 MULTI CID FTMS 0 0 0 12621 704419.875 0.39233089648826 -2 0.114166259765625 10 Unmodified _VIIDDHPEVTV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 82.5293158979368 0.0057755901510085 3 V{I|L}{I|L}D[HD]{[QN]|[E{I|L}]|[KN]}T 9 3 60.683 0.0 0.0 4.9111 0.0 0.0 0.0 197.0935457818969 197.0935457818969 34.765443323981415 0.0 0.0 0.0 0 0.7742275032520141 2.0 1.4489700043360187 0.0 V{I|L}{I|L}D[HD]{[QN]|[E{I|L}]|[KN]}T 4.9111 - 660 + 1 1.163 63001.2 1.0 7193 5436 12621 HBL1_DMSO_200M_050219_1,12631 HBL1_DMSO_200M_050219_1,12631,VIIDDHPEVTV True True VIIDDHPEVTV 64.351714 618.827685534954 35170380.0 12621.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 8.3218781153361 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12632 64.358 375.0 384580.0 25 0 100380.0 -1 0 57 1185.4819710083154 3553.4240836251465 3 1185.818164050579 MULTI CID FTMS 0 0 0 12621 635023.625 0.2267214592178525 -3 0.1530685424804687 11 3 VS 2 -1 7.2505 0.0 0.0 0.20404 0.0 0.0 2165.763269271434 1198.5357149713502 3364.298984242784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 VS 0.20404 - 35 + 1 1.163 121166.2 1.0 7194 5436 12621 HBL1_DMSO_200M_050219_1,12632 HBL1_DMSO_200M_050219_1,12632, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12633 64.364 274.0 369060.0 25 0 20346.0 + 45818 YYPAQGVQQF 10 133 600.7877975766753 1199.5610422201505 2 601.2892944216728 MULTI CID FTMS 0 0 0 12621 596204.375 0.5437021196315994 -4 0.1733474731445312 12 Unmodified _YYPAQGVQQF_ ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 25.399314129420983 0.3980215340001851 3 [PA]QGVQQ 7 3 28.688 0.0 0.0 2.3915 0.0 0.0 0.0 488.179830975803 488.179830975803 13.23769605397256 0.0 0.0 0.0 0 0.0 0.721246399047171 0.0 0.3807196863200844 + [PA]QGVQQ 2.3915 + + 1636 1 1.163 75943.2 1.0 7195 5436 12621 HBL1_DMSO_200M_050219_1,12633 HBL1_DMSO_200M_050219_1,12633,YYPAQGVQQF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12634 64.369 281.0 855450.0 25 0 67608.0 36338 SYNYLDPNYF 10 158 648.2808199859892 1294.5470870387785 2 648.2816039919853 MULTI CID FTMS 0 0 0 12621 567349.0625 0.3427353250999596 -2 0.114166259765625 13 Unmodified _SYNYLDPNYF_ ENSG00000036549|ENST00000370801|ZZZ3;nc|ENSG00000036549|Q8IYH5-2|ZZZ3;nc|ENSG00000036549|Q8IYH5-3|ZZZ3 18.1463463914782 0.5430639438673815 3 [YR]{I|L}P[C(Carbamidomethyl (C))C]SSY{M(Oxidation (M))|F} 10 7 + 53.263 0.0 0.0 4.1144 4.1144 85.06 0.0 0.0 0.0 14.603375808965277 40.16435149434496 14.603375808965277 29.301375329707103 0 1.305462187404089 0.958607314841775 0.4247425010840047 0.0 [YR]{I|L}P[C(Carbamidomethyl (C))C]SSY{M(Oxidation (M))|F};[YR]{I|L}C{I|L}[DN][HD]{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}C[C(Carbamidomethyl (C))R][{I|L}P]SY{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[Q{I|L}][C(Carbamidomethyl (C))R]DY{M(Oxidation (M))|F};[CS]Y[C(Carbamidomethyl (C))R][{I|L}P]SY{M(Oxidation (M))|F} 4.1144;1.851;1.3542;1.1282;0.53652 -;-;-;-;- 595 1 1.163 176338.7 1.0 7196 5436 12621 HBL1_DMSO_200M_050219_1,12634 HBL1_DMSO_200M_050219_1,12634,SYNYLDPNYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12635 64.372 150.0 412780.0 25 0 76592.0 14847 ILGKPVPV 8 89 411.77488639426593 821.5352198553319 2 411.7749816775322 MULTI CID FTMS 0 0 0 12621 502200.125 0.5310956800170475 3 -0.2441558837890625 14 Unmodified _ILGKPVPV_ ENST00000358127.8_1_9:36839507-36839606:-|nuORF 2.889219685676258 0.8067950007271085 3 P 1 7 6.9897 0.0 0.0 0.85081 0.0 0.0 411.2813973172867 310.1785982721313 721.459995589418 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.85081 + + 10 + 1 1.163 52431.9 1.0 7197 5436 12621 HBL1_DMSO_200M_050219_1,12635 HBL1_DMSO_200M_050219_1,12635,ILGKPVPV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12636 64.377 290.0 621980.0 25 0 26847.0 + 24872 MPMQDIKMI 9 187 561.7711860056291 1121.5278190780582 2 561.7715331912041 MULTI CID FTMS 0 0 0 12621 487156.1875 1.0 0 0.0 15 Oxidation (M) _MPMQDIKM(Oxidation (M))I_ ENSG00000185686|ENST00000405655|PRAME 51.41523569358685 0.0372669606867193 3 MPMQD{I|L}K{M(Oxidation (M))|F}{I|L} 9 0 + 67.319 0.0 0.0 6.0025 6.0025 83.056 0.0 0.0 0.0 36.07195483041884 3.482459300524596 3.482459300524596 4.771212547196619 0 1.385151878060192 2.0 0.2302046884880938 0.2742275032520141 + + MPMQD{I|L}K{M(Oxidation (M))|F}{I|L};MPMQD{I|L}KYP;MPMQD{I|L}KPY;MPM[AG]D{I|L}K{M(Oxidation (M))|F}{I|L};MPNE{M(Oxidation (M))|F}{I|L}KM{I|L};MPN{[SA]|[TG]}{[QS]|[NT]}K{M(Oxidation (M))|F}{I|L};MPM[AG]D{I|L}KYP;MPNE{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}P;MPN{[SA]|[TG]}{[QS]|[NT]}KYP;MPM[AG]D{I|L}KPY 6.0025;5.577;5.5216;5.1814;5.1778;5.1468;4.756;4.7524;4.7213;4.7006 +;-;-;-;-;-;-;-;-;- + 5742 + 1 1.163 139815.3 1.0 7198 5436 12621 HBL1_DMSO_200M_050219_1,12636 HBL1_DMSO_200M_050219_1,12636,MPMQDIKMI True False MPMQDIKMI 64.377059 561.771533191204 6728423.0 12621.0 ENSG00000185686|ENST00000405655|PRAME 6.375761032104492 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12637 64.384 372.0 1074800.0 25 0 140240.0 18666 LAIKTISL 8 202 429.7873554465716 857.5601579599431 2 429.7867614626884 MULTI CID FTMS 0 0 0 12621 463374.90625 1.0 0 0.0 16 Unmodified _LAIKTISL_ ENST00000508873.1_1_4:24773712-24773916:+|nuORF 52.268347100219714 0.1285778651304833 3 {I|L}A 2 6 28.003 0.0 0.0 3.2654 0.0 0.0 0.0 670.4136640548212 670.4136640548212 5.956422358036857 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 0.0 0.0 + {I|L}A 3.2654 + + 1264 + 1 1.163 305702.0 1.0 7199 5436 12621 HBL1_DMSO_200M_050219_1,12637 HBL1_DMSO_200M_050219_1,12637,LAIKTISL True False IAKILTTV 64.383741 429.786761462688 3786743.5 12621.0 ENSG00000163507|ENST00000295746|CIP2A;;ENST00000487834.5_1_3:108281971-108308222:-|nuORF;;nc|ENSG00000163507|Q8TCG1-2|CIP2A 0.4033300876617431 2.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12638 64.391 385.0 492670.0 25 0 32773.0 + 2362 AQLPVTPDV 9 176 470.2603589422013 938.5061649512028 2 470.2612792849541 MULTI CID FTMS 0 0 0 12621 351390.875 1.0 0 0.0 17 Unmodified _AQLPVTPDV_ ENSG00000014138|ENST00000265465|POLA2;ENST00000527850.5_1_11:65029833-65063521:+|nuORF;nc|ENSG00000014138|Q14181-2|POLA2 34.40172386719151 0.1061884637610825 3 [VP]TAT{[QN]|[E{I|L}]|[KN]}P 8 8 30.583 0.0 0.0 3.2587 0.0 0.0 0.0 127.05841702642569 127.05841702642569 4.793643751248951 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.8979400086720375 0.0 [VP]TAT{[QN]|[E{I|L}]|[KN]}P 3.2587 - 2146 1 1.163 145603.4 1.0 7200 5436 12621 HBL1_DMSO_200M_050219_1,12638 HBL1_DMSO_200M_050219_1,12638,AQLPVTPDV True True AQLPVTPDV 64.390634 470.261279284954 2179311.75 12621.0 ENST00000527850.5_1_11:65029833-65063521:+|nuORF;;ENSG00000014138|ENST00000265465|POLA2;;nc|ENSG00000014138|Q14181-2|POLA2 6.467366536458333 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12639 64.397 340.0 327480.0 25 0 57014.0 + 15556 IPYDAKTIQTI 11 131 631.8529800792131 1261.6914072252262 2 631.8543578982353 MULTI CID FTMS 0 0 0 12621 297514.46875 0.4989849399832072 6 -0.4642105102539062 18 Unmodified _IPYDAKTIQTI_ ENSG00000133739|ENST00000360375|LRRCC1;nc|ENSG00000133739|Q9C099-2|LRRCC1 85.76441949171179 0.0033696626484081 3 {I|L}PY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RP]QT{I|L} 10 4 + 73.414 0.0 0.0 5.8187 5.8187 90.308 0.0 0.0 0.0 30.13541628787124 13.521825181113629 13.521825181113629 22.58986910263616 0 0.75 1.5228787452803376 1.6791746928241125 0.6549471895720984 {I|L}PY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RP]QT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VS][WR]QT{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VS][WR]Q{I|L}T{I|L};{I|L}NYVV{[QV]|[N{I|L}]|[RA]|[KV]}PMS{I|L};[{I|L}T][MT][WR]QT{I|L}{I|L};[{I|L}T][MT][WR]Q{I|L}T{I|L};{I|L}NYVV{[QV]|[N{I|L}]|[RA]|[KV]}PMTV;{[QV]|[N{I|L}]|[RA]|[KV]}YG[RV]ADE{I|L}{I|L};[{I|L}T]Q[RN][Y{I|L}]E{I|L}{I|L};{I|L}PY[Y{I|L}][RN]QPV 5.8187;4.0283;3.947;3.7654;3.4743;3.393;2.9738;2.9495;2.8955;2.8844 -;-;-;-;-;-;-;-;-;- 1488 + 1 1.163 90824.3 1.0 7201 5436 12621 HBL1_DMSO_200M_050219_1,12639 HBL1_DMSO_200M_050219_1,12639,IPYDAKTIQTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12640 64.404 359.0 240630.0 25 0 13999.0 + 31542 RQLEALENDNF 11 140 674.8282848119346 0 674.8284179568291 PEAK CID FTMS 0 0 0 12621 291504.3125 0.8988151290471497 1 -0.0756988525390625 19 Unmodified _RQLEALENDNF_ ENSG00000106400|ENST00000305105|ZNHIT1;ENST00000485387.1_1_7:100865814-100867236:+|nuORF;ENST00000492315.5_1_7:100864992-100867236:+|nuORF 51.487983226225225 0.0423370816860787 3 NDNE{I|L}AER{I|L} 9 9 62.821 0.0 0.0 4.6615 0.0 0.0 165.07898065726914 125.03629480533438 290.1152754626035 0.0 0.0 0.0 0.0 0 1.0994850021680094 0.0 0.9436726795685342 0.6694451763165201 NDNE{I|L}AER{I|L} 4.6615 - 1068 + 1 1.163 69618.4 1.0 7202 5436 12621 HBL1_DMSO_200M_050219_1,12640 HBL1_DMSO_200M_050219_1,12640,RQLEALENDNF True True RQLEALENDNF 64.404468 674.828417956829 1555153.625 12621.0 ENST00000492315.5_1_7:100864992-100867236:+|nuORF;;ENST00000485387.1_1_7:100865814-100867236:+|nuORF;;ENSG00000106400|ENST00000305105|ZNHIT1 6.935365041097005 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12641 64.411 371.0 726340.0 25 0 61098.0 + -1 TMCLTGPCL 9 231 534.7291688156762 0 534.7274047732353 PEAK CID FTMS 0 0 0 12621 234087.828125 1.0 0 0.0 20 2 Carbamidomethyl (C),Oxidation (M) _TM(Oxidation (M))C(Carbamidomethyl (C))LTGPC(Carbamidomethyl (C))L_ REV__ENST00000417753.5_1_3:48557182-48594149:-|nuORF 18.13498045792455 0.2189554373504223 3 Y{I|L}E{[CT]|[{M(Oxidation (M))|F}G]}Q 6 -1 11.783 0.0 0.0 1.1039 0.0 0.0 245.03553382100228 82.06707178287343 327.1026056038757 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9604093769761876 0.4247425010840047 Y{I|L}E{[CT]|[{M(Oxidation (M))|F}G]}Q 1.1039 - 551 + 1 1.163 207944.9 1.0 7203 5436 12621 HBL1_DMSO_200M_050219_1,12641 HBL1_DMSO_200M_050219_1,12641,TMCLTGPCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12643 64.415 1.9 25981000.0 25 0 2314100.0 + 22347 LPSPLKQTI 9 72 498.8078646768776 995.6011764205552 2 498.8085510134697 MULTI CID FTMS 0 0 0 12642 32373742.0 0.0672529568602434 14 -1.1604537963867188 1 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 69.10491478415734 0.0214449631113747 3 {I|L}PSP{I|L}[KQ]T{I|L} 9 0 + 86.367 0.0 0.0 8.6748 8.6748 98.626 0.0 0.0 0.0 76.57312836760731 13.46787486224656 13.46787486224656 71.8360688456422 0 0.8807196863200843 1.6989700043360187 1.024227503252014 0.3494850021680094 + + {I|L}PSP{I|L}[KQ]T{I|L};{I|L}TT{I|L}PK[NP]{I|L};{I|L}{[DS]|[MA]|[CV]|TT}{I|L}PKQ[VP];{I|L}{[DS]|[MA]|[CV]|TT}{I|L}PK[AG][VP] 8.6748;1.4595;0.98865;0.063767 +;-;-;- + 348 + 1 1.16 42049.0 1.0 7204 5437 12642 HBL1_DMSO_200M_050219_1,12643 HBL1_DMSO_200M_050219_1,12643,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12644 64.416 21.0 3318700.0 25 0 251550.0 + 19682 LGLRPLHQL 9 97 523.8266846202646 1045.638816307329 2 523.8278686404228 MULTI CID FTMS 0 0 0 12642 3110048.0 0.446566680350637 -2 0.1524734497070312 2 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 71.13359017698441 0.0206607516130725 3 {I|L}G{I|L}{I|L}[YK]V 7 5 55.341 0.0 0.0 5.2925 0.0 0.0 0.0 256.13056360416255 256.13056360416255 39.081575598659306 0.0 0.0 0.0 0 1.174742501084005 2.0 0.0 0.805462187404089 {I|L}G{I|L}{I|L}[YK]V 5.2925 - 189 + 1 1.16 58449.8 1.0 7205 5437 12642 HBL1_DMSO_200M_050219_1,12644 HBL1_DMSO_200M_050219_1,12644,LGLRPLHQL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12645 64.418 13.0 6539300.0 25 0 1012600.0 + 39117 TYGERVVAF 9 90 521.2717946458087 1040.5290363584172 2 521.2723876833916 MULTI CID FTMS 0 0 0 12642 4241883.5 0.0266059676428427 -4 0.2287673950195312 3 Unmodified _TYGERVVAF_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;ENST00000462343.1_1_2:10266966-10267371:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 30.7034409873982 0.1405282614900322 3 TYVH 4 6 49.795 0.0 0.0 4.7855 0.0 0.0 0.0 537.2813814752561 537.2813814752561 9.361818737241734 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 TYVH 4.7855 - 304 + 1 1.16 67461.5 1.0 7206 5437 12642 HBL1_DMSO_200M_050219_1,12645 HBL1_DMSO_200M_050219_1,12645,TYGERVVAF False True TYGERVVAF 64.417669 521.272387683392 4764625920.0 12642.0 ENSG00000171848|ENST00000304567|RRM2;;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;;nc|ENSG00000171848|P31350-2|RRM2;;ENST00000462343.1_1_2:10266966-10267371:+|nuORF 7.29609743754069 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12646 64.419 22.0 2160300.0 25 0 314810.0 478 AEGELVRL 8 71 443.7537469394903 885.4929409457806 2 443.7534362673759 MULTI CID FTMS 0 0 0 12642 2779789.0 0.2432614100011481 -3 0.1898651123046875 4 Unmodified _AEGELVRL_ nc|ENSG00000182809|P52943-2|CRIP2 28.486842064014134 0.4448922141344407 3 {[DA]|[EG]}AE{I|L}[RV]{I|L} 8 2 + 59.87 0.0 0.0 6.7612 6.7612 82.116 0.0 0.0 0.0 14.436974992327125 2.430380486862944 2.430380486862944 2.430380486862944 0 0.9247425010840048 2.0 0.4247425010840047 0.0 {[DA]|[EG]}AE{I|L}[RV]{I|L};{[DA]|[EG]}AE{I|L}[R{I|L}]V;{[DA]|[EG]}[KG]Q[RV]{I|L};{[DA]|[EG]}[KG]Q[R{I|L}]V 6.7612;6.4867;3.15;2.8755 -;-;-;- 53 + 1 1.16 42639.5 1.0 7207 5437 12642 HBL1_DMSO_200M_050219_1,12646 HBL1_DMSO_200M_050219_1,12646,AEGELVRL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12647 64.42 21.0 2813000.0 25 0 576840.0 + 29258 QHGGEGPV 8 77 390.6847833084935 779.355013683787 2 390.6851989626884 MULTI CID FTMS 0 0 0 12642 2061519.0 0.8290541490228692 -1 0.0756988525390625 5 Unmodified _QHGGEGPV_ REV__ENST00000370691.6_1_20:60889559-60889904:-|nuORF 2.889219685676258 0.8067950007271085 3 VVE 3 -1 25.19 0.0 0.0 3.2321 0.0 0.0 0.0 449.1522603481026 449.1522603481026 12.425340138198171 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 VVE 3.2321 - 41 1 1.16 52858.7 1.0 7208 5437 12642 HBL1_DMSO_200M_050219_1,12647 HBL1_DMSO_200M_050219_1,12647,QHGGEGPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12648 64.421 39.0 1351900.0 25 0 225340.0 -1 LGAHFCCFDS 10 73 578.7322000232333 1155.4498471132663 2 578.7329589724541 MULTI CID FTMS 0 0 0 12642 1612692.375 0.9986205973051296 -1 0.0756988525390625 6 Carbamidomethyl (C) _LGAHFC(Carbamidomethyl (C))CFDS_ ENST00000301633.8_1_17:76219650-76219956:+|nuORF 10.823927491677226 0.6659270209832991 3 {[VA]|[{I|L}G]}EAE 5 -1 51.51 0.0 0.0 4.458 0.0 0.0 0.0 653.2185762994749 653.2185762994749 44.06295947543775 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.0 {[VA]|[{I|L}G]}EAE 4.458 - 39 + 1 1.16 48141.4 1.0 7209 5437 12642 HBL1_DMSO_200M_050219_1,12648 HBL1_DMSO_200M_050219_1,12648,LGAHFCCFDS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12649 64.423 52.0 938890.0 25 0 94683.0 + 15476 IPRVQVAQI 9 83 512.3188478340669 1022.6231427349338 2 512.3193847537041 MULTI CID FTMS 0 0 0 12642 1053605.5 0.6667753060902575 -2 0.1524734497070312 7 Unmodified _IPRVQVAQI_ ENSG00000134882|ENST00000403766|UBAC2;nc|ENSG00000134882|Q8NBM4-2|UBAC2;nc|ENSG00000134882|Q8NBM4-3|UBAC2 26.88365393820708 0.1891292719743517 3 {I|L}VAQ{I|L} 5 4 36.37 0.0 0.0 3.5565 0.0 0.0 480.2809925763688 0.0 480.2809925763688 0.0 22.390690719683093 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}VAQ{I|L} 3.5565 - 146 1 1.16 43914.5 1.0 7210 5437 12642 HBL1_DMSO_200M_050219_1,12649 HBL1_DMSO_200M_050219_1,12649,IPRVQVAQI False True IPRVQVAQI 64.422563 512.319384753704 14250305.0 12642.0 ENSG00000134882|ENST00000403766|UBAC2;;nc|ENSG00000134882|Q8NBM4-3|UBAC2;;nc|ENSG00000134882|Q8NBM4-2|UBAC2 1.873923897743225 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12650 64.424 44.0 1201000.0 25 0 115100.0 + 32206 RVVDLLNQA 9 83 514.2981290475152 1026.5817051618303 2 514.2984496951103 MULTI CID FTMS 0 0 0 12642 975345.75 1.0 0 0.0 8 Unmodified _RVVDLLNQA_ ENSG00000125755|ENST00000245934|SYMPK;nc|ENSG00000125755|Q92797-2|SYMPK 24.99096001346401 0.2132109383330889 3 D{I|L}{I|L}N[QA] 6 3 31.273 0.0 0.0 3.0463 0.0 0.0 354.23884780097814 0.0 354.23884780097814 0.0 13.073193899842432 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.0 + D{I|L}{I|L}N[QA] 3.0463 + + 93 1 1.16 46838.9 1.0 7211 5437 12642 HBL1_DMSO_200M_050219_1,12650 HBL1_DMSO_200M_050219_1,12650,RVVDLLNQA False True RVVDLLNQA 64.423784 514.29844969511 8844852.0 12642.0 nc|ENSG00000125755|Q92797-2|SYMPK;;ENSG00000125755|ENST00000245934|SYMPK 4.104691823323567 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12651 64.425 47.0 911240.0 25 0 85518.0 + 11612 GLADNTVIAKV 11 77 550.819339702132 1099.6241264710638 2 550.8185912966728 MULTI CID FTMS 0 0 0 12642 715679.0625 0.8225759422685821 -2 0.1524734497070312 9 Unmodified _GLADNTVIAKV_ ENSG00000113407|ENST00000265112|TARS1;nc|ENSG00000113407|P26639-2|TARS1 34.93206674587334 0.2904649469012649 3 {[VA]|[{I|L}G]}A 3 8 35.647 0.0 0.0 3.2417 0.0 0.0 0.0 855.4597872369749 855.4597872369749 16.745951546364267 0.0 0.0 0.0 0 0.6694451763165201 2.0 0.0 0.0 + {[VA]|[{I|L}G]}A 3.2417 + + 106 + 1 1.16 39135.6 1.0 7212 5437 12642 HBL1_DMSO_200M_050219_1,12651 HBL1_DMSO_200M_050219_1,12651,GLADNTVIAKV False True GLADNTVIAKV 64.425074 550.818591296673 16003313.0 12642.0 ENSG00000113407|ENST00000265112|TARS1;;nc|ENSG00000113407|P26639-2|TARS1 6.061839739481608 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12652 64.43 286.0 509130.0 25 0 17841.0 6580 EANCPEVTGEV 11 167 574.2492149468575 1146.4838769605149 2 574.2503539919853 MULTI CID FTMS 0 0 0 12642 613810.8125 0.4060639350891309 -4 0.2287673950195312 10 Unmodified _EANCPEVTGEV_ ENSG00000070413|ENST00000263196|DGCR2;ENST00000389262.8_1_22:19048277-19109719:-|nuORF;nc|ENSG00000070413|P98153-3|DGCR2 12.872603262515298 0.7673816944342327 3 PS{I|L}{I|L}SY 6 10 39.461 0.0 0.0 3.4419 0.0 0.0 468.13580674742735 0.0 468.13580674742735 0.0 5.579185927778646 0.0 0.0 0 0.7302046884880937 0.0 0.7059771852360797 0.0 PS{I|L}{I|L}SY 3.4419 - 1051 + 1 1.16 111167.9 1.0 7213 5437 12642 HBL1_DMSO_200M_050219_1,12652 HBL1_DMSO_200M_050219_1,12652,EANCPEVTGEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12653 64.436 288.0 406790.0 25 0 89283.0 + 5493 RVIMPSGLEPA 11 101 585.3208084350348 1168.6270639368695 2 585.3217040896416 MULTI CID FTMS 0 0 0 12642 607920.4375 0.6614389063068987 1 -0.09161376953125 11 Unmodified _DLSLGRQRGPA_ ENST00000377459.2_1_6:27114971-27115085:+|nuORF 26.268140514670165 0.4754186812857754 3 [DV]T{I|L}G[PS]M 8 7 42.273 0.0 0.0 3.6173 0.0 0.0 0.0 365.2318209283813 365.2318209283813 24.085142482848298 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 [DV]T{I|L}G[PS]M 3.6173 - 169 + 1 1.16 92977.0 1.0 7214 5437 12642 HBL1_DMSO_200M_050219_1,12653 HBL1_DMSO_200M_050219_1,12653,DLSLGRQRGPA False False RVIMPSGLEPA 64.435636 585.321704089642 19687256.0 12642.0 ENST00000377459.2_1_6:27114971-27115085:+|nuORF 6.464009443918864 2.0 False 11.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12654 64.442 324.0 505680.0 25 0 45953.0 + -1 CFWSLFCREAH 11 91 756.8283806389578 1511.6422083447155 2 756.8293334841728 MULTI CID FTMS 0 0 0 12642 542468.1875 0.8698196471511986 -3 0.1898651123046875 12 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))FWSLFC(Carbamidomethyl (C))REAH_ REV__ENSG00000128394|ENST00000308521|APOBEC3F;REV__ENSG00000243811|ENST00000216099|APOBEC3D;REV__ENSG00000244509|ENST00000361441|APOBEC3C 2.9952420565917617 0.861016188266951 3 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F} 13 -1 76.222 0.0 0.0 5.0424 0.0 0.0 0.0 205.0695851654149 205.0695851654149 51.00596668436302 0.0 0.0 0.0 0 0.0 0.958607314841775 0.3054621874040891 1.8882104921644447 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F} 5.0424 - 2561 1 1.16 116735.0 1.0 7215 5437 12642 HBL1_DMSO_200M_050219_1,12654 HBL1_DMSO_200M_050219_1,12654,CFWSLFCREAH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12655 64.444 93.0 1196900.0 25 0 192130.0 + 4895 DGIRIYKI 8 109 326.5309132354672 976.5709103066016 3 326.5308715701103 MULTI CID FTMS 0 0 0 12642 521746.90625 1.0 0 0.0 13 Unmodified _DGIRIYKI_ ENSG00000129566|ENST00000262715|TEP1;ENST00000557314.5_1_14:20839728-20850189:-|nuORF;nc|ENSG00000129566|Q99973-2|TEP1 16.942295170755138 0.6606234159769251 3 [DG]{I|L}{I|L}RYK{I|L} 8 2 + 41.584 0.0 0.0 4.2582 4.2582 77.862 0.0 0.0 0.0 12.892977826634883 5.149098156090624 5.149098156090624 5.149098156090624 0 0.1923877696554315 0.7958800173440752 0.0 0.0 [DG]{I|L}{I|L}RYK{I|L};[DG]{I|L}{I|L}RY{I|L}K;{NN|[MP]|[D{I|L}]|[EV]}G{I|L}RYK{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{I|L}RY{I|L}K;{[RE]|[WV]}{I|L}[VG]YK{I|L};{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}[TA]K{I|L};{[RE]|[WV]}{I|L}[VG]Y{I|L}K;{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}[TA]{I|L}K 4.2582;3.7309;2.938;2.4107;1.6344;1.3536;1.1072;0.82635 -;-;-;-;-;-;-;- 114 + 1 1.16 94899.8 1.0 7216 5437 12642 HBL1_DMSO_200M_050219_1,12655 HBL1_DMSO_200M_050219_1,12655,DGIRIYKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12656 64.451 420.0 792790.0 25 0 46263.0 + 43445 WTAELGIRHV 10 216 394.5523982146847 1180.635365244254 3 394.5520507693291 MULTI CID FTMS 0 0 0 12642 469081.0 0.7273946671329046 -1 0.0756988525390625 14 Unmodified _WTAELGIRHV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 49.55428908609986 0.0827668555218455 3 WTAE{I|L}G{I|L}RHV 10 0 + 79.076 0.0 0.0 6.6978 6.6978 86.584 0.0 0.0 0.0 15.02697515943352 7.112044607530308 7.112044607530308 6.020599913279625 0 0.4386218330464625 0.0 0.4247425010840047 1.1549471895720984 + + WTAE{I|L}G{I|L}RHV;WTAE{I|L}VARHV;WTAE{I|L}G{I|L}RVH;WTAEVA{I|L}RHV;WTAE{I|L}VARVH;WTAEV{I|L}ARHV;WTAEVA{I|L}RVH;WTAVEA{I|L}RHV;WTAEV{I|L}ARVH;WTAVE{I|L}ARHV 6.6978;6.1878;6.0954;5.9712;5.5854;5.4612;5.3688;5.0161;4.8589;4.5061 +;-;-;-;-;-;-;-;-;- + 1828 + 1 1.16 257529.1 1.0 7217 5437 12642 HBL1_DMSO_200M_050219_1,12656 HBL1_DMSO_200M_050219_1,12656,WTAELGIRHV True True WTAELGIRHV 64.451067 394.552050769329 6498393.5 12642.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 6.629016717274983 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12657 64.459 454.0 396650.0 25 0 106000.0 -1 0 162 385.21991919537055 384.21264272877056 1 385.2198974490166 MULTI CID FTMS 0 0 0 12642 410057.40625 0.3257879862040158 7 -0.5837554931640625 15 3 V 1 -1 11.594 0.0 0.0 3.0175 0.0 0.0 267.1329898740815 0.0 267.1329898740815 0.0 2.668013053360552 0.0 0.0 0 0.0 0.0 0.0 0.0 V 3.0175 - 25 + 1 1.16 145955.3 1.0 7218 5437 12642 HBL1_DMSO_200M_050219_1,12657 HBL1_DMSO_200M_050219_1,12657, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12658 64.462 157.0 597660.0 25 0 76929.0 7640 EKEKLSTL 8 122 474.2739603482278 946.5333677632556 2 474.2740051150322 MULTI CID FTMS 0 0 0 12642 268661.3125 0.0588264636558522 -3 0.1898651123046875 16 Unmodified _EKEKLSTL_ ENST00000586602.5_1_19:9678795-9679729:-|nuORF 68.08070601005525 0.1147890174299629 3 [VG]ETK{I|L}ST{I|L} 9 3 + 65.004 0.0 0.0 6.8675 6.8675 86.251 0.0 0.0 0.0 5.039882034014013 13.467874862246552 5.039882034014013 5.039882034014013 0 0.5 1.5228787452803376 1.9361818737241727 0.0 [VG]ETK{I|L}ST{I|L};{[MG]|[TS]}PTK{I|L}ST{I|L};[{I|L}T][DG]K{I|L}ST{I|L};[{I|L}T]SAAA{I|L}ST{I|L};[TP]STK{I|L}ST{I|L};{[VA]|[{I|L}G]}DTK{I|L}ST{I|L};[VG]ET{I|L}KST{I|L};[{I|L}T]S{[NV]|[RG]}{I|L}ST{I|L};[{I|L}T]K[DG]{I|L}ST{I|L};{[MG]|[TS]}PT{I|L}KST{I|L} 6.8675;6.3351;6.2791;6.2131;6.0951;6.0338;5.8878;5.841;5.8168;5.3554 -;-;-;-;-;-;-;-;-;- 1898 1 1.16 72587.5 1.0 7219 5437 12642 HBL1_DMSO_200M_050219_1,12658 HBL1_DMSO_200M_050219_1,12658,EKEKLSTL True False KTIGDLSTL 64.462213 474.274005115032 27072758.0 12642.0 ENSG00000080345|ENST00000444746|RIF1;;nc|ENSG00000080345|Q5UIP0-2|RIF1 4.7304229736328125 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12659 64.472 574.0 213660.0 25 0 10862.0 + 19498 LFLISGSS 8 164 412.23031496903735 822.4460770048747 2 412.2305480837822 MULTI CID FTMS 0 0 0 12642 228798.796875 0.163869325253941 21 -1.6725616455078125 17 Unmodified _LFLISGSS_ REV__ENSG00000021355|ENST00000380739|SERPINB1;REV__nc|ENSG00000021355|P30740-2|SERPINB1 6.354104778181461 0.7857632046190106 3 V 1 -1 8.9794 0.0 0.0 1.0918 0.0 0.0 705.3664775559474 0.0 705.3664775559474 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0918 - 24 + 1 1.16 98583.5 1.0 7220 5437 12642 HBL1_DMSO_200M_050219_1,12659 HBL1_DMSO_200M_050219_1,12659,LFLISGSS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12660 64.484 589.0 197510.0 25 0 19479.0 + 41651 VPPSLPSL 8 141 405.24183436984697 808.469115806494 2 405.2423278689384 MULTI CID FTMS 0 0 0 12642 227239.765625 0.5839165735786889 7 -0.5837554931640625 18 Unmodified _VPPSLPSL_ REV__ENST00000523812.1_1_8:144357822-144358971:+|nuORF 67.03532852164291 0.116292309877964 3 [{I|L}P]S[VP]PS{I|L} 8 -1 + 36.52 0.0 0.0 4.5172 4.5172 74.44 0.0 0.0 0.0 3.735899786366232 4.749321833847873 3.735899786366232 2.218487496163561 0 1.1677353201839438 1.6989700043360187 0.5 0.0 [{I|L}P]S[VP]PS{I|L};[{I|L}P]P[VS]PS{I|L};[PS]VP{I|L}PS{I|L};[VP]SP{I|L}PS{I|L};[PS]VP[PS]{I|L}{I|L};[VP]PS{I|L}PS{I|L};[VP]SP[PS]{I|L}{I|L};{[TV]|[{I|L}S]}P[VP]PS{I|L};[VP]PS[PS]{I|L}{I|L};[PS]{I|L}[VP]PS{I|L} 4.5172;4.2428;4.0551;3.7394;3.4154;3.367;3.0996;2.7468;2.7273;1.9235 -;-;-;-;-;+;-;-;-;- + 215 1 1.16 91920.7 1.0 7221 5437 12642 HBL1_DMSO_200M_050219_1,12660 HBL1_DMSO_200M_050219_1,12660,VPPSLPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12661 64.493 534.0 314810.0 25 0 21984.0 + 43447 WTAELGIRHV 10 180 591.3250995145798 1180.6356460959596 2 591.3281127810478 MULTI CID FTMS 0 0 0 12642 229140.890625 0.6978508977259652 -1 0.0756988525390625 19 Unmodified _WTAELGIRHV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 70.33199760932243 0.018925923965799 3 WTAE{I|L}G{I|L}RHV 10 0 + 85.885 0.0 0.0 7.2745 7.2745 94.234 0.0 0.0 0.0 64.91625503740917 4.69273760456403 4.69273760456403 18.68221838861396 0 1.2478499570595205 1.5228787452803376 0.0 0.7134679910804405 + + WTAE{I|L}G{I|L}RHV;WTAE{I|L}HRR{I|L};WTA[KG]GG{I|L}RHV;WTA[W{I|L}]{I|L}RHV;WTV[DV]G{I|L}RHV;WTA[KG]N{I|L}RHV;WTV[RD]{I|L}RHV;WTQQGG{I|L}RHV;WT[KQ]GG{I|L}RHV;WTAQQRRHV 7.2745;5.6921;5.2301;5.1397;5.0976;4.9281;4.7993;4.4613;4.4613;4.2577 +;-;-;-;-;-;-;-;-;- + 1138 + 1 1.16 127551.3 1.0 7222 5437 12642 HBL1_DMSO_200M_050219_1,12661 HBL1_DMSO_200M_050219_1,12661,WTAELGIRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12662 64.503 545.0 187680.0 25 0 11834.0 + + -1 RIYPEEMIQT 10 138 640.2699291614307 1278.5253053896613 2 640.2707397341728 MULTI CID FTMS 0 0 0 12642 214441.25 1.0 0 0.0 20 Carbamidomethyl (C) _EQNPSEISC(Carbamidomethyl (C))CI_ ENSG00000147416|ENST00000276390|ATP6V1B2;ENSG00000116039|ENST00000234396|ATP6V1B1;ENST00000523482.5_1_8:20054917-20070443:+|nuORF 29.84058131909904 0.3915366693542702 3 [YT]QEY{I|L} 6 -1 38.458 0.0 0.0 3.008 0.0 0.0 0.0 478.1400874543676 478.1400874543676 18.31573403704092 0.0 0.0 0.0 0 0.7134679910804405 2.0 1.0952266673433142 0.2614393726401688 [YT]QEY{I|L} 3.008 - 1541 1 1.16 84946.6 1.0 7223 5437 12642 HBL1_DMSO_200M_050219_1,12662 HBL1_DMSO_200M_050219_1,12662,EQNPSEISCCI False False RIYPEEMIQT 64.502727 640.270739734173 950725.0 12642.0 ENSG00000147416|ENST00000276390|ATP6V1B2;;ENSG00000116039|ENST00000234396|ATP6V1B1;;ENST00000523482.5_1_8:20054917-20070443:+|nuORF 2.8680981000264487 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12664 64.507 1.7 24868000.0 25 0 3688200.0 + 24035 RIIDVVYNA 9 57 531.8007244008267 1061.5868958684532 2 531.8015624880791 MULTI CID FTMS 0 0 0 12663 26953124.0 0.2624194626272319 2 -0.175445556640625 1 Unmodified _LWALLVYNA_ ENSG00000142937|ENST00000396651|RPS8 24.67388899826682 0.2172451872415813 3 C(Carbamidomethyl (C))VVY{[QG]|[NA]} 6 5 34.654 0.0 0.0 3.2643 0.0 0.0 337.27379042793126 0.0 337.27379042793126 0.0 24.195925227640984 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 C(Carbamidomethyl (C))VVY{[QG]|[NA]} 3.2643 - 19 1 1.16 38050.1 1.0 7224 5438 12663 HBL1_DMSO_200M_050219_1,12664 HBL1_DMSO_200M_050219_1,12664,LWALLVYNA False False RIIDVVYNA 64.506925 531.801562488079 3692067072.0 12663.0 ENSG00000142937|ENST00000396651|RPS8 7.165298461914063 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12665 64.508 7.9 2457500.0 25 0 255280.0 + 18620 LAEWLRYNA 9 47 568.2991996791862 1134.5838464251724 2 568.2997314333916 MULTI CID FTMS 0 0 0 12663 5176220.5 0.3329939954270601 8 -0.7026214599609375 2 Unmodified _LAEWLRYNA_ REV__ENSG00000112494|ENST00000230256|UNC93A;REV__nc|ENSG00000112494|Q86WB7-2|UNC93A 1.6526216038709556 0.8569919814334629 3 {I|L} 1 -1 5.4846 0.0 0.0 0.4834 0.0 0.0 435.2243016027099 583.2565401666624 1018.4808417693724 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.4834 + + 1 + 1 1.16 21558.3 1.0 7225 5438 12663 HBL1_DMSO_200M_050219_1,12665 HBL1_DMSO_200M_050219_1,12665,LAEWLRYNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12666 64.509 11.0 3071200.0 25 0 227090.0 + 44520 YPDRNLPTI 9 76 544.7897074529764 1087.5648619727526 2 544.7903320193291 MULTI CID FTMS 0 0 0 12663 4906836.5 0.6757000551925018 2 -0.175445556640625 3 Unmodified _YPDRNLPTI_ ENSG00000115539|ENST00000264254|PDCL3 39.94969957227396 0.0757326808254658 3 YPP{[TV]|[{I|L}S]}[NS]PT 9 5 48.139 0.0 0.0 4.4263 0.0 0.0 0.0 128.0721834772094 128.0721834772094 25.20689673945462 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.805462187404089 0.0 YPP{[TV]|[{I|L}S]}[NS]PT 4.4263 - 120 + 1 1.16 32797.4 1.0 7226 5438 12663 HBL1_DMSO_200M_050219_1,12666 HBL1_DMSO_200M_050219_1,12666,YPDRNLPTI True True YPDRNLPTI 64.509281 544.790332019329 644841960.0 12663.0 ENSG00000115539|ENST00000264254|PDCL3 6.151093641916911 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12667 64.51 13.0 2574600.0 25 0 156270.0 + 9818 FPDPNVKYV 9 79 539.7821390043049 1077.5497250754097 2 539.7821533083916 MULTI CID FTMS 0 0 0 12663 4355162.0 0.742845368885335 2 -0.175445556640625 4 Unmodified _FPDPNVKYV_ ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF 32.78568957990786 0.1150597335874693 3 [DP]{[NV]|[RG]}P{M(Oxidation (M))|F}KYV 9 4 + 42.368 0.0 0.0 3.9318 3.9318 76.855 0.0 0.0 0.0 5.051499783199056 5.7340029633584 5.051499783199056 5.051499783199056 0 1.0994850021680094 1.3010299956639813 0.0 0.0 [DP]{[NV]|[RG]}P{M(Oxidation (M))|F}KYV;[NP]VDP{M(Oxidation (M))|F}KYV;{M(Oxidation (M))|F}PD[NP]VKYV;[DP]{I|L}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}KYV;[NP]VSP{M(Oxidation (M))|F}[VG]YV 3.9318;3.463;3.3997;2.3077;0.63759 -;-;+;-;- + 125 1 1.16 34490.0 1.0 7227 5438 12663 HBL1_DMSO_200M_050219_1,12667 HBL1_DMSO_200M_050219_1,12667,FPDPNVKYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12668 64.512 15.0 4010300.0 25 0 546290.0 + 35774 SVIPQIQKV 9 86 506.3135985179971 1010.6126441027942 2 506.3139831423759 MULTI CID FTMS 0 0 0 12663 3246487.75 0.3844858002634623 -3 0.2440872192382812 5 Unmodified _SVIPQIQKV_ ENSG00000151876|ENST00000281623|FBXO4;nc|ENSG00000151876|Q9UKT5-2|FBXO4 24.020572477871973 0.2255576514309169 3 [VS]{I|L}[QP]{I|L}QKV 9 0 + 46.877 0.0 0.0 4.6384 4.6384 83.168 0.0 0.0 0.0 19.921525057367404 4.569488448666803 4.569488448666803 9.208187539523747 0 0.8494850021680094 2.0 0.0 0.0 + + [VS]{I|L}[QP]{I|L}QKV;[VS]{I|L}[QP]{I|L}[AG]KV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[QP]{I|L}[PA] 4.6384;3.7273;2.8404 +;-;- + 237 + 1 1.16 51860.8 1.0 7228 5438 12663 HBL1_DMSO_200M_050219_1,12668 HBL1_DMSO_200M_050219_1,12668,SVIPQIQKV False True SVIPQIQKV 64.51164 506.313983142376 172179536.0 12663.0 nc|ENSG00000151876|Q9UKT5-2|FBXO4;;ENSG00000151876|ENST00000281623|FBXO4 6.127448558807373 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12669 64.513 25.0 1904900.0 25 0 526260.0 + 37139 THPALVLL 8 82 432.2712558009679 862.5279586687358 2 432.2713806033134 MULTI CID FTMS 0 0 0 12663 2287267.5 1.0 0 0.0 6 Unmodified _THPALVLL_ ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3190651-3210559:+|nuORF 40.44857923139169 0.2267865117615937 3 [YR]SV{I|L}{I|L}{I|L} 7 5 + 43.9 0.0 0.0 5.0897 5.0897 80.871 0.0 0.0 0.0 3.767507096020992 21.50469768245636 3.767507096020992 5.563025007672877 0 0.8182503180159344 0.0 1.274227503252014 0.0 [YR]SV{I|L}{I|L}{I|L};[HT]APV{I|L}{I|L}{I|L};[YR]S{I|L}V{I|L}{I|L};[YR]VS{I|L}{I|L}{I|L};[HT]AP{I|L}V{I|L}{I|L};[YR]VTV{I|L}{I|L} 5.0897;4.4448;4.3407;3.8993;3.6957;3.1502 -;-;-;-;-;- 199 1 1.16 43138.1 1.0 7229 5438 12663 HBL1_DMSO_200M_050219_1,12669 HBL1_DMSO_200M_050219_1,12669,THPALVLL False True THPALVLL 64.512819 432.271380603313 21088936.0 12663.0 ENST00000510626.5_1_4:3190651-3210559:+|nuORF;;ENSG00000197386|ENST00000355072|HTT 0.5700360139211019 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12670 64.514 44.0 963250.0 25 0 121080.0 + 37004 TFPNGVKGL 9 69 466.7639271883791 931.5133014435582 2 466.7643920779228 MULTI CID FTMS 0 0 0 12663 844984.25 0.5841681433174369 -3 0.2440872192382812 7 Unmodified _TFPNGVKGL_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 26.88365393820708 0.1891292719743517 3 [{M(Oxidation (M))|F}T]PNRKG{I|L} 8 2 [{M(Oxidation (M))|F}T] + + 28.933 2.8432 1.1459 3.106 3.106 50.425 0.0 0.0 0.0 0.0 19.179074862957 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 [{M(Oxidation (M))|F}T]PNRKG{I|L} 3.106 - 99 + 1 1.16 39976.0 1.0 7230 5438 12663 HBL1_DMSO_200M_050219_1,12670 HBL1_DMSO_200M_050219_1,12670,TFPNGVKGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12671 64.515 45.0 1140900.0 25 0 73670.0 + 27869 PLRVHSGPL 9 94 488.2901227975792 974.5656926619585 2 489.2935058474541 MULTI CID FTMS 0 0 0 12663 750632.75 0.795867100181139 2 -0.175445556640625 8 Unmodified _PLRVHSGPL_ REV__ENSG00000153574|ENST00000283646|RPIA 7.289230182591677 0.6602208344931196 3 [{I|L}P][KC]{I|L}YK 7 -1 28.829 0.0 0.0 2.9582 0.0 0.0 0.0 126.06572863291456 126.06572863291456 11.971900989529082 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P][KC]{I|L}YK 2.9582 - 182 1 1.16 43087.3 1.0 7231 5438 12663 HBL1_DMSO_200M_050219_1,12671 HBL1_DMSO_200M_050219_1,12671,PLRVHSGPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12672 64.517 101.0 636080.0 25 0 74502.0 -1 0 63 603.9675200152114 1808.8807306458343 3 603.9681884646416 MULTI CID FTMS 0 0 0 12663 618884.5625 0.1352377580171452 15 -1.1748809814453125 9 3 EQC(Carbamidomethyl (C)){I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q 8 -1 45.851 0.0 0.0 2.5348 0.0 0.0 817.4142522296216 0.0 817.4142522296216 0.0 25.138050198288013 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 EQC(Carbamidomethyl (C)){I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q 2.5348 - 279 + 1 1.16 58765.1 1.0 7232 5438 12663 HBL1_DMSO_200M_050219_1,12672 HBL1_DMSO_200M_050219_1,12672, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12673 64.521 179.0 655250.0 25 0 63452.0 + 12829 GVTVSLAV 8 84 745.4459043942956 744.4386279276955 1 745.4461547732353 MULTI CID FTMS 0 0 0 12663 579089.1875 0.2598289038916846 -2 0.1673126220703125 10 Unmodified _GVTVSLAV_ ENSG00000168778|ENST00000303372|TCTN2;nc|ENSG00000168778|Q96GX1-2|TCTN2 106.8454739257335 0.061725950463852 3 {[SA]|[TG]}VV{I|L}SAV 8 3 + 83.502 0.0 0.0 11.217 11.217 93.854 0.0 0.0 0.0 9.542425094393252 14.904630595263413 9.542425094393252 8.394192071636965 0 1.385151878060192 0.8538719643217619 1.8996498648046136 0.0 {[SA]|[TG]}VV{I|L}SAV;{[SA]|[TG]}VVTVAV;{[SA]|[TG]}V{I|L}VSAV;{[SA]|[TG]}VVS{I|L}AV;{[VA]|[{I|L}G]}SV{I|L}SAV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}SAV;{[TV]|[{I|L}S]}GV{I|L}SAV;{[SA]|[TG]}V{I|L}SVAV;{[SA]|[TG]}{I|L}VVSAV;{[VA]|[{I|L}G]}SVTVAV 11.217;10.089;10.074;9.9462;9.935;9.6132;9.1923;8.9463;8.8601;8.8074 -;-;-;-;-;-;-;-;-;- 1445 1 1.16 85315.2 1.0 7233 5438 12663 HBL1_DMSO_200M_050219_1,12673 HBL1_DMSO_200M_050219_1,12673,GVTVSLAV True True SAVVLSAV 64.520944 745.446154773235 11699908.0 12663.0 nc|ENSG00000100280|Q10567-2|AP1B1;;nc|ENSG00000006125|P63010|AP2B1;;ENSG00000100280|ENST00000357586|AP1B1;;nc|ENSG00000100280|Q10567-4|AP1B1;;nc|ENSG00000006125|P63010-3|AP2B1;;nc|ENSG00000100280|Q10567-3|AP1B1;;ENSG00000006125|ENST00000610402|AP2B1;;ENST00000441188.2_1_X:92478653-92479352:-|nuORF 2.32586407661438 1.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12674 64.524 173.0 309360.0 25 0 44566.0 + 34937 SQITAIEAQHL 11 86 605.8252778931001 1209.636002853 2 605.8257934451103 MULTI CID FTMS 0 0 0 12663 540279.1875 0.4177117109908104 2 -0.175445556640625 11 Unmodified _SQITAIEAQHL_ ENSG00000104812|ENST00000323798|GYS1;nc|ENSG00000104812|P13807-2|GYS1 66.68293810318366 0.0420228588792048 3 {[QS]|[NT]}{I|L}TA{I|L}EAQ[H{I|L}] 11 0 + 79.552 0.0 0.0 6.5765 6.5765 88.41 0.0 0.0 0.0 60.16644491405816 7.367585652254178 7.367585652254178 8.74291523596392 0 1.805462187404089 0.0 0.8494850021680094 0.5 + + {[QS]|[NT]}{I|L}TA{I|L}EAQ[H{I|L}];{[QS]|[NT]}{I|L}TA{I|L}EA[H{I|L}]Q;{[QS]|[NT]}{I|L}TA{I|L}EA[AG][H{I|L}];{[QS]|[NT]}{I|L}TA{I|L}N[DV][H{I|L}];{[QS]|[NT]}{I|L}TA{I|L}GG[DV][H{I|L}];{[QS]|[NT]}{I|L}TA{I|L}N[PG]N[VP];{[QS]|[NT]}{I|L}TA{I|L}GG[PG]N[VP];{[QS]|[NT]}{I|L}TA{I|L}N[PG]GG[VP];{[QS]|[NT]}{I|L}T{NN|[MP]|[D{I|L}]|[EV]}[VG]Q[H{I|L}] 6.5765;5.8537;5.4085;5.1909;4.4363;4.3297;3.5776;3.5776;2.8104 +;-;-;-;-;-;-;-;- + 727 + 1 1.16 42167.0 1.0 7234 5438 12663 HBL1_DMSO_200M_050219_1,12674 HBL1_DMSO_200M_050219_1,12674,SQITAIEAQHL True True SQITAIEAQHL 64.524325 605.82579344511 16293293.0 12663.0 ENSG00000104812|ENST00000323798|GYS1;;nc|ENSG00000104812|P13807-2|GYS1 8.514373302459717 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12675 64.526 71.0 721930.0 25 0 73250.0 + 15319 IPLKQLQEV 9 94 534.3263559587667 1066.6381589843334 2 534.3268920779228 MULTI CID FTMS 0 0 0 12663 381366.71875 0.5278937154367883 -2 0.1673126220703125 12 Unmodified _IPLKQLQEV_ ENSG00000182150|ENST00000653738|ERCC6L2;nc|ENSG00000182150|Q5T890-2|ERCC6L2 31.26834338654808 0.1333407332142048 3 {I|L}P{I|L} 3 6 42.294 0.0 0.0 3.9651 0.0 0.0 0.0 740.3955782525999 740.3955782525999 20.498037644757048 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 + {I|L}P{I|L} 3.9651 + + 251 + 1 1.16 47708.4 1.0 7235 5438 12663 HBL1_DMSO_200M_050219_1,12675 HBL1_DMSO_200M_050219_1,12675,IPLKQLQEV False True IPLKQLQEV 64.526008 534.326892077923 5373821.0 12663.0 nc|ENSG00000182150|Q5T890-2|ERCC6L2;;ENSG00000182150|ENST00000653738|ERCC6L2 1.0804213086764018 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12676 64.532 301.0 567990.0 25 0 84165.0 -1 0 179 309.20643939694173 616.3983258606835 2 309.2064697146416 MULTI CID FTMS 0 0 0 12663 358686.625 0.6508362284974878 -3 0.2440872192382812 13 3 {I|L}MK{I|L}{I|L} 5 -1 + 50.855 0.0 0.0 8.2504 8.2504 96.528 0.0 0.0 0.0 35.18794267371055 10.933825909009194 10.933825909009194 21.11589154625741 0 0.8807196863200843 1.5228787452803376 0.0 0.0 {I|L}MK{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L};[K{I|L}]M{I|L}{I|L} 8.2504;4.8247;3.6106 -;-;- 70 + 1 1.16 140617.1 1.0 7236 5438 12663 HBL1_DMSO_200M_050219_1,12676 HBL1_DMSO_200M_050219_1,12676, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12677 64.534 108.0 486850.0 25 0 90190.0 + -1 LRPAYFPTL 9 93 560.3147839814543 1118.6150150297085 2 560.3141357302666 MULTI CID FTMS 0 0 0 12663 345639.84375 0.8999415388583519 1 -0.07684326171875 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LRPAYFPTL_ REV__ENSG00000229544|ENST00000451024|NKX1-2 11.640296217721598 0.521594087909532 3 [TP]{I|L}M 4 -1 24.188 0.0 0.0 2.1623 0.0 0.0 0.0 673.3696591549616 673.3696591549616 9.686444798681812 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.2215141619232908 0.0 [TP]{I|L}M 2.1623 - 111 1 1.16 47876.2 1.0 7237 5438 12663 HBL1_DMSO_200M_050219_1,12677 HBL1_DMSO_200M_050219_1,12677,LRPAYFPTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12678 64.537 151.0 563970.0 25 0 38049.0 + 8968 FAPMSPRI 8 102 459.7472694425801 917.4799859519602 2 459.7464172244072 MULTI CID FTMS 0 0 0 12663 332467.09375 0.8207418126565513 -2 0.1673126220703125 15 Unmodified _FAPMSPRI_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 26.88365393820708 0.4786498634179528 3 {[MS]|[{M(Oxidation (M))|F}A]}PMS[RP]{I|L} 8 0 + 31.164 0.0 0.0 3.3967 3.3967 76.355 0.0 0.0 0.0 15.147357923647109 3.468327158110114 3.468327158110114 6.020599913279625 0 0.3494850021680094 0.0 0.0 0.3054621874040891 + + {[MS]|[{M(Oxidation (M))|F}A]}PMS[RP]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}PA{M(Oxidation (M))|F}[RP]{I|L};{[DS]|[MA]|[CV]|TT}{I|L}MS[RP]{I|L};[AG]KKSMP{[CP]|[EA]};{[DS]|[MA]|[CV]|TT}{I|L}A{M(Oxidation (M))|F}[RP]{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KQ]AP{[CP]|[EA]};[AG]KK{M(Oxidation (M))|F}AP{[CP]|[EA]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{I|L}][RP]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[WE][RP]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KP]{M(Oxidation (M))|F}[RH] 3.3967;2.7405;2.3595;2.0555;1.7033;1.5401;1.3993;1.2213;0.98243;0.60144 +;-;-;-;-;-;-;-;-;- + 254 + 1 1.16 69560.8 1.0 7238 5438 12663 HBL1_DMSO_200M_050219_1,12678 HBL1_DMSO_200M_050219_1,12678,FAPMSPRI False True FAPMSPRI 64.536788 459.746417224407 4348963.5 12663.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 3.982848644256592 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12679 64.546 551.0 357860.0 25 0 35264.0 -1 0 158 946.4338529237544 1890.8531529143088 2 946.438037097454 MULTI CID FTMS 0 0 0 12663 289210.21875 0.2410539643411935 -2 0.1673126220703125 16 3 NMPN{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]} 16 -1 + 127.95 0.0 0.0 6.7666 6.7666 89.185 0.0 0.0 0.0 44.93673429820174 14.252961752788394 14.252961752788394 9.013902021140495 0 2.705112052208703 1.5228787452803376 0.6989700043360187 1.955112052208703 NMPN{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};NMPN{I|L}NEE[AG]RDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};NMPN{I|L}GGEEQRDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};NMPN{I|L}NEEQ[VG]DG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};NMPGG{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};NMPN{I|L}NEEQRDG{M(Oxidation (M))|F}K{[CP]|[EA]};NMPGG{I|L}GGEEQRDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};NMPGG{I|L}NEE[AG]RDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};NMPN{I|L}GGEE[AG]RDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};NMPGG{I|L}NEEQ[VG]DG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]} 6.7666;6.2899;6.2899;6.2899;6.2899;5.9865;5.814;5.814;5.814;5.814 -;-;-;-;-;-;-;-;-;- 20951 + 1 1.16 131144.3 1.0 7239 5438 12663 HBL1_DMSO_200M_050219_1,12679 HBL1_DMSO_200M_050219_1,12679, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12680 64.557 587.0 342640.0 25 0 52024.0 -1 0 142 964.4450831006824 2890.313419902247 3 964.7816039919852 MULTI CID FTMS 0 0 0 12663 245666.734375 0.2252555671940113 -3 0.2440872192382812 17 3 [NP]TSADNARWD{I|L}QHP{[RE]|[WV]}{[WN]|[YH]}{I|L}NN{[QD]|[EN]|[WG]|[KD]|[RS]} 24 -1 + 70.977 0.0 0.0 2.4557 2.4557 66.898 0.0 0.0 0.0 3.679767852945943 3.450528104279016 3.450528104279016 0.5237875363565792 0 0.5 0.0 1.6861818737241734 0.8494850021680094 [NP]TSADNARWD{I|L}QHP{[RE]|[WV]}{[WN]|[YH]}{I|L}NN{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSADNARWD{I|L}QHM[HM][WP]{I|L}NN{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSADNARWD{I|L}QHPYY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}NN{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSADNARWD{I|L}QHM[HN]{[WN]|[YH]}{I|L}NN{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSADNARWD{I|L}QHP{[RE]|[WV]}{[WN]|[YH]}{I|L}NP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[TP]NSADNARWD{I|L}QHP{[RE]|[WV]}{[WN]|[YH]}{I|L}NN{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSADNARWD{I|L}QHM[HM][WP]{I|L}NP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[TP]NSADNARWD{I|L}QHM[HM][WP]{I|L}NN{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}PSADNARWD{I|L}QHP{[RE]|[WV]}{[WN]|[YH]}{I|L}NN{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSANDARWD{I|L}QHP{[RE]|[WV]}{[WN]|[YH]}{I|L}NN{[QD]|[EN]|[WG]|[KD]|[RS]} 2.4557;2.4376;2.3515;2.3515;2.3363;2.3284;2.3182;2.3103;2.2906;2.2906 -;-;-;-;-;-;-;-;-;- 28635 1 1.16 145272.5 1.0 7240 5438 12663 HBL1_DMSO_200M_050219_1,12680 HBL1_DMSO_200M_050219_1,12680, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12681 64.562 305.0 538880.0 25 0 47179.0 40550 VKALKAAG 8 206 379.248917424136 756.483281915072 2 379.2487975955009 MULTI CID FTMS 0 0 0 12663 226467.828125 0.2066093155037159 3 -0.2262191772460937 18 Unmodified _VKALKAAG_ ENSG00000023697|ENST00000428559|DERA;ENST00000528821.5_1_12:16109876-16185684:+|nuORF 0.6903765706972694 0.8201419426409876 3 P 1 8 11.109 0.0 0.0 1.4685 0.0 0.0 641.4193532425119 0.0 641.4193532425119 0.0 0.2717883116129638 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.4685 - 72 + 1 1.16 128814.6 1.0 7241 5438 12663 HBL1_DMSO_200M_050219_1,12681 HBL1_DMSO_200M_050219_1,12681,VKALKAAG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12682 64.573 585.0 336890.0 25 0 19754.0 + 29774 QPYAVSEL 8 137 906.454662211319 905.447385744719 1 906.4549438357352 MULTI CID FTMS 0 0 0 12663 231051.0 0.1324981199527155 7 -0.5982666015625 19 Unmodified _QPYAVSEL_ ENSG00000174444|ENST00000307961|RPL4;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF 64.23631603340823 0.116217441302575 3 [QP]YAVSE{I|L} 8 0 + 45.295 0.0 0.0 5.0025 5.0025 74.007 0.0 0.0 0.0 0.9768294003359586 5.618935373580129 0.9768294003359586 0.9768294003359586 0 0.2887254899964357 0.958607314841775 0.7742275032520141 1.8807196863200843 + + [QP]YAVSE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAVSE{I|L};[QP]YAVES{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAVES{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PQVSE{I|L};VKYTPGNQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AQVSE{I|L};VKYPTGNQ;[VS]M{I|L}QSE{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PQVES{I|L} 5.0025;4.8946;4.5046;4.3967;4.3641;4.1586;4.0317;3.9642;3.9136;3.8662 +;-;-;-;-;-;-;-;-;- + 6404 1 1.16 130208.0 1.0 7242 5438 12663 HBL1_DMSO_200M_050219_1,12682 HBL1_DMSO_200M_050219_1,12682,QPYAVSEL True True QPYAVSEL 64.572623 906.454943835735 14079125.0 12663.0 ENST00000566622.5_1_15:66794044-66797161:-|nuORF;;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;;ENSG00000174444|ENST00000307961|RPL4;;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;;ENST00000567229.5_1_15:66795359-66797161:-|nuORF 3.970001459121704 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12683 64.58 320.0 808700.0 25 0 71788.0 + 41175 VPDIRLKAL 9 203 342.22192393170394 1023.6439423953118 3 342.2223998904228 MULTI CID FTMS 0 0 0 12663 152737.5 0.2291939954887104 -2 0.1673126220703125 20 Unmodified _VPDIRLKAL_ REV__ENSG00000162630|ENST00000367434|B3GALT2 23.78978130925829 0.2284941198415988 3 VPDAK{I|L}R{I|L}{I|L} 9 -1 + 70.557 0.0 0.0 6.8927 6.8927 87.124 0.0 0.0 0.0 43.6454487400778 7.925801508315359 7.925801508315359 6.020599913279625 0 0.4476212463643423 0.494850021680094 0.4247425010840047 0.6307196863200843 VPDAK{I|L}R{I|L}{I|L};VPDA{I|L}KR{I|L}{I|L};VPD{I|L}AKR{I|L}{I|L};VP{I|L}DAKR{I|L}{I|L};VPWK{I|L}{[VA]|[{I|L}G]}V{I|L};VP{I|L}KN{[QN]|[E{I|L}]|[KN]}V{I|L};VP{I|L}K{[DA]|[EG]}R{I|L}{I|L};VP{I|L}[NS]{I|L}R{I|L}{I|L};VP{I|L}KW{[VA]|[{I|L}G]}V{I|L};VPW{I|L}K{[VA]|[{I|L}G]}V{I|L} 6.8927;6.3045;5.8384;4.9519;4.8736;4.5283;4.4685;4.4685;4.2854;4.2854 -;-;-;-;-;-;-;-;-;- 531 + 1 1.16 217322.9 1.0 7243 5438 12663 HBL1_DMSO_200M_050219_1,12683 HBL1_DMSO_200M_050219_1,12683,VPDIRLKAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12685 64.584 4.5 7873400.0 25 0 1056300.0 -1 0 52 366.7365590087173 731.4585650842347 2 366.7364684939384 MULTI CID FTMS 0 0 0 12684 10531193.0 0.1366572279617235 3 -0.2200546264648437 1 3 [{I|L}V]PK[Y{I|L}] 6 -1 + 39.494 0.0 0.0 5.3993 5.3993 89.665 0.0 0.0 0.0 22.83809673312028 2.98332479720628 2.98332479720628 39.493559221610965 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK[Y{I|L}] 5.3993 - 50 + 1 1.148 33561.1 1.0 7244 5439 12684 HBL1_DMSO_200M_050219_1,12685 HBL1_DMSO_200M_050219_1,12685, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12686 64.585 27.0 2091000.0 25 0 341030.0 + 44593 YPFKPPKI 8 89 330.5321852651292 988.5747263955876 3 330.5320922732353 MULTI CID FTMS 0 0 0 12684 1954092.75 0.1117125028255518 -13 0.7339935302734375 2 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 48.691 0.0 0.0 4.9254 4.9254 82.626 0.0 0.0 0.0 24.73883619425653 5.810935890735216 5.810935890735216 8.239087409443187 0 0.0 1.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 4.9254;4.092 +;- + 133 + 1 1.148 48271.3 1.0 7245 5439 12684 HBL1_DMSO_200M_050219_1,12686 HBL1_DMSO_200M_050219_1,12686,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12687 64.586 21.0 543490.0 25 0 70263.0 6490 EAIGTNYNAR 10 36 554.7744484126837 1107.5343438921673 2 554.7749511599541 MULTI CID FTMS 0 0 0 12684 2835803.75 0.3541858775218912 -2 0.16845703125 3 Unmodified _EAIGTNYNAR_ ENST00000453064.1_1_7:76744718-76745129:-|nuORF 1.4819007175156935 0.719781833666733 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.148 15747.3 1.0 7246 5439 12684 HBL1_DMSO_200M_050219_1,12687 HBL1_DMSO_200M_050219_1,12687,EAIGTNYNAR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12688 64.587 15.0 2431000.0 25 0 285750.0 + -1 SVLRAMVAF 9 61 505.2765834789475 1008.538614024695 2 505.2776672244072 MULTI CID FTMS 0 0 0 12684 1108505.5 0.0311352201660626 9 -0.8000946044921875 4 Oxidation (M) _SVLRAM(Oxidation (M))VAF_ REV__SVA_D_dup1331|chr19:38854971-38856692:-|1.2988722813039473|0.199855440521665|2.7|47.0|25|3|sense 15.847184025352805 0.4077185912009129 3 [VS]{I|L} 3 -1 25.062 0.0 0.0 2.4849 0.0 0.0 0.0 706.330092866745 706.330092866745 4.488474775526186 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VS]{I|L} 2.4849 + + 70 1 1.148 33135.9 1.0 7247 5439 12684 HBL1_DMSO_200M_050219_1,12688 HBL1_DMSO_200M_050219_1,12688,SVLRAMVAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12689 64.588 38.0 1069000.0 25 0 168870.0 + 30940 RIPIAVSGV 9 70 456.2565029054072 910.4984528776145 2 456.2566711306572 MULTI CID FTMS 0 0 0 12684 993392.5625 0.1739196578480651 -11 0.6172027587890625 5 Unmodified _RKLHDSVG_ ENSG00000089154|ENST00000300648|GCN1 2.577480529830294 0.808687252328423 3 V 1 7 11.259 0.0 0.0 1.2366 0.0 0.0 793.4188992050542 0.0 793.4188992050542 0.0 3.8117849160020594 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2366 + + 8 + 1 1.148 38963.9 1.0 7248 5439 12684 HBL1_DMSO_200M_050219_1,12689 HBL1_DMSO_200M_050219_1,12689,RKLHDSVG False False RIPIAVSGV 64.588481 456.256671130657 12714729.0 12684.0 ENSG00000089154|ENST00000300648|GCN1 1.493643303712209 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12690 64.591 106.0 851390.0 25 0 74756.0 + 37783 TLSEKLVEI 9 128 516.3033561731299 1030.5921594130598 2 516.3029662966728 MULTI CID FTMS 0 0 0 12684 749463.375 0.316882725781255 -2 0.16845703125 6 Unmodified _TLSEKLVEI_ REV__ENSG00000082805|ENST00000360905|ERC1;REV__ENSG00000187672|ENST00000288221|ERC2;REV__ENST00000536573.6_1_12:1213918-1353789:+|nuORF;REV__ENST00000539007.5_1_12:1192665-1225250:+|nuORF;REV__nc|ENSG00000082805|Q8IUD2-2|ERC1;REV__nc|ENSG00000082805|Q8IUD2-3|ERC1;REV__nc|ENSG00000082805|Q8IUD2-4|ERC1 43.85829265575387 0.0542763391141878 3 {NN|[MP]|[D{I|L}]|[EV]}TT{I|L}KVE{I|L} 9 -1 + 60.037 0.0 0.0 5.8255 5.8255 77.772 0.0 0.0 0.0 1.5869707978831613 14.973024840566469 1.5869707978831613 1.5869707978831613 0 0.2887254899964357 1.3010299956639813 2.110924374808178 0.0 {NN|[MP]|[D{I|L}]|[EV]}TT{I|L}KVE{I|L};{[TV]|[{I|L}S]}ET{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}ST{I|L}KVE{I|L};{[TV]|[{I|L}S]}A{I|L}{[WT]|[RM]}VE{I|L};[{I|L}A]S{I|L}{[WT]|[RM]}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PS]{I|L}KV{M(Oxidation (M))|F}{I|L};[{I|L}A]TV{[WT]|[RM]}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}T[VP]KV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[PS]KV{M(Oxidation (M))|F}{I|L};[VP]{[ES]|[DT]|[{I|L}C]}{I|L}KV{M(Oxidation (M))|F}{I|L} 5.8255;5.6715;5.2413;4.2223;3.7921;3.6704;3.2246;3.2074;2.952;2.7941 -;-;-;-;-;-;-;-;-;- 772 1 1.148 69718.7 1.0 7249 5439 12684 HBL1_DMSO_200M_050219_1,12690 HBL1_DMSO_200M_050219_1,12690,TLSEKLVEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12691 64.592 48.0 619080.0 25 0 43340.0 + 32462 SAGLFGKQSGV 11 62 525.7825347971391 1049.550516661078 2 525.7766601443291 MULTI CID FTMS 0 0 0 12684 708855.125 0.2884715968833409 -13 0.7339935302734375 7 Unmodified _SAGLFGKQSGV_ REV__ENSG00000100426|ENST00000216268|ZBED4 9.38312468134398 0.8308777417566128 3 {[SA]|[TG]}G 3 -1 18.785 0.0 0.0 1.7898 0.0 0.0 0.0 831.4365694777374 831.4365694777374 6.311056041451625 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[SA]|[TG]}G 1.7898 + + 20 1 1.148 32038.7 1.0 7250 5439 12684 HBL1_DMSO_200M_050219_1,12691 HBL1_DMSO_200M_050219_1,12691,SAGLFGKQSGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12692 64.594 65.0 579100.0 25 0 37486.0 + -1 ELKVKCLA 8 71 480.7828707948629 959.5511886565256 2 480.7830993533134 MULTI CID FTMS 0 0 0 12684 681627.75 0.1460322712610399 -13 0.7339935302734375 8 Carbamidomethyl (C) _ELKVKC(Carbamidomethyl (C))LA_ REV__nc|ENSG00000166436|O15016-2|TRIM66 2.302733041254933 0.8103549651115762 3 V 1 -1 10.596 0.0 0.0 1.1043 0.0 0.0 842.4717265367 0.0 842.4717265367 0.0 0.2173284689054533 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1043 + + 16 + 1 1.148 39026.8 1.0 7251 5439 12684 HBL1_DMSO_200M_050219_1,12692 HBL1_DMSO_200M_050219_1,12692,ELKVKCLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12693 64.6 362.0 492090.0 25 0 53997.0 + 32075 RVLPPSALQSV 11 149 583.8481402842426 1165.6817276352851 2 583.8490478396416 MULTI CID FTMS 0 0 0 12684 453328.8125 0.5643738026065304 17 -1.3341064453125 9 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 73.1962812333195 0.0231417158388345 3 P[PS]A{I|L}QSV 8 3 50.144 0.0 0.0 4.3017 0.0 0.0 368.2543063116 0.0 368.2543063116 0.0 27.59154666633372 0.0 0.0 0 1.1307196863200843 0.0 1.274227503252014 0.0 + P[PS]A{I|L}QSV 4.3017 + + 1457 1 1.148 134754.5 1.0 7252 5439 12684 HBL1_DMSO_200M_050219_1,12693 HBL1_DMSO_200M_050219_1,12693,RVLPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12694 64.609 513.0 592370.0 25 0 51748.0 2017 APENYGHG 8 206 422.6824347733221 843.3503166134442 2 422.6822692751884 MULTI CID FTMS 0 0 0 12684 318306.75 0.5915058550033031 3 -0.2200546264648437 10 Unmodified _APENYGHG_ ENSG00000042832|ENST00000220616|TG;nc|ENSG00000042832|P01266-2|TG 2.577480529830294 0.808687252328423 3 [MT]CDY{I|L}V 7 7 [MT]CDY{I|L} + + 13.979 -3.0805 -0.42416 1.6576 1.6576 48.623 0.0 0.0 0.0 0.0 -2.588643834802156 -2.588643834802156 0.0 0 0.0 0.0 0.0 0.0 [MT]CDY{I|L}V 1.6576 - 128 + 1 1.148 232544.6 1.0 7253 5439 12684 HBL1_DMSO_200M_050219_1,12694 HBL1_DMSO_200M_050219_1,12694,APENYGHG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12695 64.617 461.0 428840.0 25 0 43461.0 + 1536 ALKPDLVNV 9 192 484.7923688389206 967.5701847446412 2 484.7917358279228 MULTI CID FTMS 0 0 0 12684 309555.25 0.5084813555549578 -3 0.2441558837890625 11 Unmodified _ALKPDLVNV_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 55.50274090549119 0.0285720310785888 3 {I|L}AKCKVD 7 7 60.385 0.0 0.0 6.2409 0.0 0.0 0.0 207.11448084049064 207.11448084049064 15.321727046344954 0.0 0.0 0.0 0 0.9802046884880936 1.5228787452803376 0.0 0.2887254899964357 {I|L}AKCKVD 6.2409 - 5097 + 1 1.148 154780.5 1.0 7254 5439 12684 HBL1_DMSO_200M_050219_1,12695 HBL1_DMSO_200M_050219_1,12695,ALKPDLVNV True True ALKPDLVNV 64.61735 484.791735827923 12022084.0 12684.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1;;ENST00000493342.1_1_X:24745055-24752029:+|nuORF 5.930044968922933 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12696 64.625 440.0 476990.0 25 0 205870.0 -1 0 130 702.3818042299334 701.3745277633334 1 702.3813964724541 MULTI CID FTMS 0 0 0 12684 302001.03125 0.2699153199435235 71 -4.136039733886719 12 3 [{I|L}A]P{M(Oxidation (M))|F}A{I|L}A 7 -1 + 43.251 0.0 0.0 6.1665 6.1665 83.969 0.0 0.0 0.0 4.990412362921745 11.619642813315458 4.990412362921745 4.990412362921745 0 1.0 0.958607314841775 0.0 0.0 [{I|L}A]P{M(Oxidation (M))|F}A{I|L}A;{[QN]|[E{I|L}]|[KN]}WA{I|L}A;[{I|L}A][WE]{I|L}A;{[HG]|PP}S{M(Oxidation (M))|F}A{I|L}A;[PS]P{M(Oxidation (M))|F}A{I|L}A;{[QN]|[E{I|L}]|[KN]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A;[AG]D[KG]A{I|L}A;{NN|[MP]|[D{I|L}]|[EV]}[RD]{I|L}A;{[QD]|[EN]|[WG]|[KD]|[RS]}[KG]A{I|L}A;[VP][MT]A{I|L}A 6.1665;5.455;4.0251;3.8938;3.8513;2.731;2.418;2.0246;1.676;1.6496 -;-;-;-;-;-;-;-;-;- 281 1 1.148 149309.8 1.0 7255 5439 12684 HBL1_DMSO_200M_050219_1,12696 HBL1_DMSO_200M_050219_1,12696, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12697 64.633 439.0 510000.0 25 0 18707.0 + -1 TDPCPSMSSL 10 228 547.7277960368834 1093.4410391405668 2 547.7269775271416 MULTI CID FTMS 0 0 0 12684 271603.5 1.0 0 0.0 13 Carbamidomethyl (C) _TDPC(Carbamidomethyl (C))PSMSSL_ REV__ENST00000409645.5_1_2:135206953-135207217:+|nuORF 9.38312468134398 0.6832340498775793 3 {[DA]|[EG]}H{I|L}Y{[QC]|[C(Carbamidomethyl (C))A]}[MN] 9 -1 + 13.611 0.0 0.0 1.2448 1.2448 69.638 0.0 0.0 0.0 0.4237337867862667 -3.3641307059230865 -3.3641307059230865 2.8872548999643577 0 0.0 0.7695510786217261 0.5941876774005248 0.0 {[DA]|[EG]}H{I|L}Y{[QC]|[C(Carbamidomethyl (C))A]}[MN];{[DA]|[EG]}H{I|L}YEE{[MS]|[{M(Oxidation (M))|F}A]};[VP]W{M(Oxidation (M))|F}[WD][MN];{[DA]|[EG]}{[{M(Oxidation (M))|F}C]|[YS]}[HN]VA{[MS]|[{M(Oxidation (M))|F}A]};[HA]D{I|L}Y{[QC]|[C(Carbamidomethyl (C))A]}[MN];[HA]D{I|L}YEE{[MS]|[{M(Oxidation (M))|F}A]} 1.2448;0.98076;0.47999;0.45667;0.3522;0.088145 -;-;-;-;-;- 1157 1 1.148 167759.3 1.0 7256 5439 12684 HBL1_DMSO_200M_050219_1,12697 HBL1_DMSO_200M_050219_1,12697,TDPCPSMSSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12698 64.642 508.0 678620.0 25 0 48013.0 + + 27570 HLSDAIVEV 9 254 492.2649941299394 0 492.2644225955009 PEAK CID FTMS 0 0 0 12684 233881.375 0.8408868395358845 -1 0.07684326171875 14 Unmodified _PLCIPSVTPG_ ENSG00000105778|ENST00000318709|AVL9;nc|ENSG00000105778|Q8NBF6-2|AVL9 20.453626601364224 0.2946171403104198 3 V{I|L}A[{M(Oxidation (M))|F}T]S 6 -1 13.895 0.0 0.0 1.4142 0.0 0.0 247.12116150031005 114.0566652887328 361.17782678904285 0.0 0.0 0.0 0.0 0 0.0 0.0 1.078542181343484 0.0 V{I|L}A[{M(Oxidation (M))|F}T]S 1.4142 - 464 + 1 1.148 258124.3 1.0 7257 5439 12684 HBL1_DMSO_200M_050219_1,12698 HBL1_DMSO_200M_050219_1,12698,PLCIPSVTPG False False HLSDAIVEV 64.641958 492.264422595501 2163839.5 12684.0 ENSG00000105778|ENST00000318709|AVL9;;nc|ENSG00000105778|Q8NBF6-2|AVL9 5.02227250734965 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12699 64.653 532.0 158300.0 25 0 12332.0 + -1 GVSDVDYSL 9 102 954.4433471560478 0 954.4433471560478 PEAK CID FTMS 0 0 0 -1 0 15 ENSG00000139163|ENST00000266517|ETNK1;nc|ENSG00000139163|Q9HBU6|ETNK1 3 {I|L}SYDVDS 7 -1 46.463 0.0 0.0 2.4366 0.0 0.0 971.4307484119018 153.06740747623283 1124.4981558881348 0.0 0.0 0.0 0.0 0 0.0 0.0 2.1778259348524363 0.0 {I|L}SYDVDS 2.4366 - 2280 + 1 1.148 63464.2 1.0 7258 5439 12684 HBL1_DMSO_200M_050219_1,12699 HBL1_DMSO_200M_050219_1,12699, False False GVSDVDYSL 64.65252 954.443347156048 9166133.0 12684.0 ENSG00000139163|ENST00000266517|ETNK1;;nc|ENSG00000139163|Q9HBU6|ETNK1 4.184136390686035 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12700 64.66 419.0 433730.0 25 0 25207.0 + -1 LLHALLSCTL 10 204 570.8272819547037 1139.6400109762071 2 570.8272582888603 MULTI CID FTMS 0 0 0 12684 187907.796875 0.3333776595007415 -2 0.16845703125 16 Carbamidomethyl (C) _LLHALLSC(Carbamidomethyl (C))TL_ REV__ENSG00000170915|ENST00000442253|PAQR8 32.30548876998284 0.2428506522065767 3 {I|L}{I|L}YGQSP[H{I|L}]{I|L} 10 -1 + 48.705 0.0 0.0 4.2738 4.2738 74.987 0.0 0.0 0.0 5.662277648165507 22.763355938195826 5.662277648165507 3.0102999566398125 0 0.2396518287104437 1.6989700043360187 0.4247425010840047 0.0 {I|L}{I|L}YGQSP[H{I|L}]{I|L};{I|L}{I|L}YGSQP[H{I|L}]{I|L};{I|L}{I|L}YG[AG]SP[H{I|L}]{I|L};{I|L}{I|L}YG[YK]SSP{I|L};{I|L}{I|L}YG[YN]{I|L}[TA]{I|L};{I|L}{I|L}YGPNT[H{I|L}]{I|L};{I|L}{I|L}YGS[AG]P[H{I|L}]{I|L};[Y{I|L}]{I|L}GQSP[H{I|L}]{I|L};{I|L}{I|L}YGQ[H{I|L}]SP{I|L};[Y{I|L}]{I|L}GSQP[H{I|L}]{I|L} 4.2738;4.0096;3.4696;3.3252;3.3113;3.2816;3.2055;3.1723;3.1506;2.9082 -;-;-;-;-;-;-;-;-;- 7035 1 1.148 138121.7 1.0 7259 5439 12684 HBL1_DMSO_200M_050219_1,12700 HBL1_DMSO_200M_050219_1,12700,LLHALLSCTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12701 64.668 448.0 471100.0 25 0 50260.0 + 39852 VFGSLWTTVVL 11 157 611.3469253143915 1220.6792976955828 2 611.3459350466728 MULTI CID FTMS 0 0 0 12684 129227.203125 0.4053818344156369 -2 0.16845703125 17 Unmodified _VFGSLWTTVVL_ REV__ENSG00000204694|ENST00000377149|OR11A1 36.12702656103203 0.2720571796884491 3 [{M(Oxidation (M))|F}V]D[QT]VTTV{I|L}V 11 -1 + 46.846 0.0 0.0 3.8377 3.8377 69.554 0.0 0.0 0.0 0.8662948521850566 17.52166914583572 0.8662948521850566 0.4845500650402812 0 0.1435078169319297 1.6989700043360187 1.774227503252014 0.0 [{M(Oxidation (M))|F}V]D[QT]VTTV{I|L}V;[{M(Oxidation (M))|F}V]{[QC]|[C(Carbamidomethyl (C))A]}{I|L}VTTV{I|L}V;[{I|L}V][YG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TTV{I|L}V;[{I|L}V][YR]V{I|L}D{[MG]|[TS]}GV;[{M(Oxidation (M))|F}T]ND{I|L}VTTV{I|L}V;[{M(Oxidation (M))|F}V]{[QS]|[NT]}EVTTV{I|L}V;[DP]QH{I|L}VTTV{I|L}V;[{I|L}V][YR]VWWTV;[DV]{M(Oxidation (M))|F}[QT]VTTV{I|L}V;[{I|L}V][YR]VE{[QD]|[EN]|[WG]|[KD]|[RS]}TV 3.8377;3.798;3.4885;3.4652;3.4548;3.392;3.3351;3.3276;3.1828;3.1704 -;-;-;-;-;-;-;-;-;- 4517 1 1.148 156811.1 1.0 7260 5439 12684 HBL1_DMSO_200M_050219_1,12701 HBL1_DMSO_200M_050219_1,12701,VFGSLWTTVVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12702 64.678 586.0 170700.0 25 0 27841.0 -1 0 55 1130.4651695827777 0 1130.463671863079 PEAK CID FTMS 0 0 0 12684 109255.859375 0.9630043407929804 -1 0.07684326171875 18 3 Y 1 -1 5.4846 0.0 0.0 0.2428 0.0 0.0 166.98800410520545 1925.8079317682248 2092.7959358734306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.2428 - 56 + 1 1.148 73803.1 1.0 7261 5439 12684 HBL1_DMSO_200M_050219_1,12702 HBL1_DMSO_200M_050219_1,12702, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12704 64.682 0.38 134770000.0 25 0 27824000.0 + 39118 TYGERVVAF 9 59 521.2717946458087 1040.5290363584172 2 521.2726318240166 MULTI CID FTMS 0 0 0 12703 152904736.0 0.9590500206932624 -1 0.098602294921875 1 Unmodified _TYGERVVAF_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;ENST00000462343.1_1_2:10266966-10267371:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 30.7034409873982 0.1405282614900322 3 TYVH 4 6 51.23 0.0 0.0 4.9235 0.0 0.0 0.0 537.2793062799436 537.2793062799436 11.677353201839438 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 TYVH 4.9235 - 94 + 1 1.139 45461.7 1.0 7262 5440 12703 HBL1_DMSO_200M_050219_1,12704 HBL1_DMSO_200M_050219_1,12704,TYGERVVAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12705 64.684 1.4 30014000.0 25 0 5642400.0 + 12378 GTIDEIQKL 9 65 508.78500561562765 1015.5554582980552 2 508.7853271365166 MULTI CID FTMS 0 0 0 12703 40303252.0 1.0 0 0.0 2 Unmodified _GTIDEIQKL_ ENSG00000167986|ENST00000301764|DDB1 47.74868867922204 0.0453060283459952 3 {[SA]|[TG]}{I|L}DE{I|L}QK{I|L} 9 0 + 73.355 0.0 0.0 7.2232 7.2232 91.38 0.0 0.0 0.0 52.47470240426402 10.597718523607966 10.597718523607966 9.208187539523747 0 0.3807196863200844 1.5228787452803376 0.3807196863200844 1.066901560044258 + + {[SA]|[TG]}{I|L}DE{I|L}QK{I|L};{[SA]|[TG]}{I|L}DE{I|L}[AG]K{I|L};[KQ]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RP];[Q{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RP] 7.2232;6.3165;1.888;1.6669 +;-;-;- + 145 + 1 1.139 39356.6 1.0 7263 5440 12703 HBL1_DMSO_200M_050219_1,12705 HBL1_DMSO_200M_050219_1,12705,GTIDEIQKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12706 64.685 1.9 29996000.0 25 0 2931300.0 19685 LGLRPLHQL 9 75 349.55396087683255 1045.6400532306975 3 349.5539733767509 MULTI CID FTMS 0 0 0 12703 25832890.0 1.0 0 0.0 3 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 30.22481116460888 0.1466181017706357 3 {[VA]|[{I|L}G]}{I|L}{I|L}[YK]V 7 5 36.8 0.0 0.0 3.5194 0.0 0.0 0.0 256.1326399564284 256.1326399564284 16.36718797487191 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.9247425010840048 {[VA]|[{I|L}G]}{I|L}{I|L}[YK]V 3.5194 - 127 + 1 1.139 56595.5 1.0 7264 5440 12703 HBL1_DMSO_200M_050219_1,12706 HBL1_DMSO_200M_050219_1,12706,LGLRPLHQL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12707 64.686 4.5 10202000.0 25 0 1715800.0 + 3573 DAAEIRLV 8 71 443.7537469394903 885.4929409457806 2 443.7536498904228 MULTI CID FTMS 0 0 0 12703 11427168.0 1.0 0 0.0 4 Unmodified _DAAEIRLV_ ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF;ENST00000494618.1_1_2:232322276-232325237:-|nuORF 37.97399986684836 0.2681860861828418 3 {[DA]|[EG]}AE{I|L}[R{I|L}]V 8 0 + 61.956 0.0 0.0 6.9967 6.9967 95.186 0.0 0.0 0.0 49.96584697476848 6.994784489444967 6.994784489444967 61.95554701812867 0 1.274227503252014 2.0 0.0 0.3807196863200844 + + {[DA]|[EG]}AE{I|L}[R{I|L}]V 6.9967 + + 49 + 1 1.139 41322.8 1.0 7265 5440 12703 HBL1_DMSO_200M_050219_1,12707 HBL1_DMSO_200M_050219_1,12707,DAAEIRLV False True DAAEIRLV 64.685907 443.753649890423 85276112.0 12703.0 ENST00000494618.1_1_2:232322276-232325237:-|nuORF;;ENST00000461347.5_1_2:232319904-232323320:-|nuORF;;ENSG00000115053|ENST00000322723|NCL 0.6949878831704458 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12708 64.687 5.8 6753300.0 25 0 630920.0 + 22348 LPSPLKQTI 9 66 498.8078646768776 995.6011764205552 2 498.8084899783134 MULTI CID FTMS 0 0 0 12703 10676125.0 0.0221784980574555 17 -1.3287811279296875 5 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 49.55428908609986 0.0413471690215031 3 {I|L}PSP{I|L}[KQ]T{I|L} 9 0 + 77.175 0.0 0.0 7.7516 7.7516 97.291 0.0 0.0 0.0 51.17168539542085 12.25268461881508 12.25268461881508 77.1754790414365 0 1.305462187404089 1.5228787452803376 0.3252574989159953 0.4247425010840047 + + {I|L}PSP{I|L}[KQ]T{I|L} 7.7516 + + 473 + 1 1.139 34955.6 1.0 7266 5440 12703 HBL1_DMSO_200M_050219_1,12708 HBL1_DMSO_200M_050219_1,12708,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12709 64.688 8.8 6754800.0 25 0 537380.0 + 19683 LGLRPLHQL 9 82 523.8266846202646 1045.638816307329 2 523.8265258669853 MULTI CID FTMS 0 0 0 12703 6345522.5 0.9111431456734028 1 -0.0507736206054687 6 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 36.04419817259434 0.0971720506436186 3 {[VA]|[{I|L}G]}{I|L} 3 6 35.062 0.0 0.0 3.3531 0.0 0.0 0.0 759.4255038896134 759.4255038896134 11.24430291999822 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 + {[VA]|[{I|L}G]}{I|L} 3.3531 + + 47 1 1.139 52087.8 1.0 7267 5440 12703 HBL1_DMSO_200M_050219_1,12709 HBL1_DMSO_200M_050219_1,12709,LGLRPLHQL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12710 64.691 150.0 1161800.0 25 0 301620.0 -1 0 51 1185.4819710083154 3553.4240836251465 3 1185.817065417767 MULTI CID FTMS 0 0 0 12703 2385633.75 0.8517389647658505 1 -0.0507736206054687 7 3 {M(Oxidation (M))|F}G[YV]SD 6 -1 12.396 0.0 0.0 0.34884 0.0 0.0 1797.651452865184 1084.5453585260375 2882.1968113912217 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G[YV]SD 0.34884 - 58 + 1 1.139 147329.1 1.0 7268 5440 12703 HBL1_DMSO_200M_050219_1,12710 HBL1_DMSO_200M_050219_1,12710, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12711 64.692 30.0 1253900.0 25 0 92359.0 + 45819 YYPAQGVQQF 10 72 600.7877975766753 1199.5610422201505 2 600.7886230349541 MULTI CID FTMS 0 0 0 12703 1735209.75 0.9792619782665392 -1 0.098602294921875 8 Unmodified _YYPAQGVQQF_ ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 26.88365393820708 0.3646707531412818 3 [AG]QPVQQ 7 5 31.801 0.0 0.0 2.6511 0.0 0.0 0.0 488.1777163747005 488.1777163747005 17.121761203836314 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.6307196863200843 [AG]QPVQQ 2.6511 - 293 1 1.139 33898.5 1.0 7269 5440 12703 HBL1_DMSO_200M_050219_1,12711 HBL1_DMSO_200M_050219_1,12711,YYPAQGVQQF False True YYPAQGVQQF 64.69247 600.788623034954 37579520.0 12703.0 ENSG00000114867|ENST00000346169|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1 5.930006186167399 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12712 64.694 63.0 1051200.0 25 0 98751.0 36339 SYNYLDPNYF 10 76 648.2808199859892 1294.5470870387785 2 648.2812377810478 MULTI CID FTMS 0 0 0 12703 1522481.875 0.919730647103909 2 -0.1214523315429687 9 Unmodified _SYNYLDPNYF_ ENSG00000036549|ENST00000370801|ZZZ3;nc|ENSG00000036549|Q8IYH5-2|ZZZ3;nc|ENSG00000036549|Q8IYH5-3|ZZZ3 18.1463463914782 0.5430639438673815 3 SY{M(Oxidation (M))|F} 3 7 38.188 0.0 0.0 2.9499 0.0 0.0 879.3679066388687 0.0 879.3679066388687 0.0 19.50318762307696 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 SY{M(Oxidation (M))|F} 2.9499 - 102 1 1.139 55468.5 1.0 7270 5440 12703 HBL1_DMSO_200M_050219_1,12712 HBL1_DMSO_200M_050219_1,12712,SYNYLDPNYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12713 64.696 62.0 789140.0 25 0 122150.0 + 40426 VIIDDHPEVTV 11 68 618.827593301693 1235.640633670186 2 618.8278076052666 MULTI CID FTMS 0 0 0 12703 1209771.875 0.6737897397699535 2 -0.1214523315429687 10 Unmodified _VIIDDHPEVTV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 66.45667989310934 0.0429411148994294 3 [{I|L}V]{I|L}DC[{I|L}V]{[{M(Oxidation (M))|F}D]|MM}TV 11 5 + 58.438 0.0 0.0 4.7294 4.7294 85.192 0.0 0.0 0.0 23.71523434085148 11.037272807870586 11.037272807870586 12.825160557860931 0 1.3494850021680094 2.0 1.079689690656103 0.0 [{I|L}V]{I|L}DC[{I|L}V]{[{M(Oxidation (M))|F}D]|MM}TV;[{I|L}V]{I|L}D{[RE]|[WV]}[YE]TV;{[MS]|[{M(Oxidation (M))|F}A]}V{I|L}V[EP]{[{M(Oxidation (M))|F}D]|MM}TV 4.7294;3.6914;2.408 -;-;- 136 + 1 1.139 39881.4 1.0 7271 5440 12703 HBL1_DMSO_200M_050219_1,12713 HBL1_DMSO_200M_050219_1,12713,VIIDDHPEVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12714 64.697 49.0 1387600.0 25 0 198660.0 + 34232 SLPPQLRF 8 99 479.2774038569007 956.5402547806012 2 479.2770873904228 MULTI CID FTMS 0 0 0 12703 1141029.0 0.4340447943004253 -10 0.6099700927734375 11 Unmodified _SLPPQLRF_ REV__ENSG00000116147|ENST00000367674|TNR;REV__nc|ENSG00000116147|Q92752-2|TNR 4.75600775471527 0.7954636275367004 3 V 1 -1 10.596 0.0 0.0 1.1077 0.0 0.0 839.4608918429045 0.0 839.4608918429045 0.0 -0.117405479247612 -0.117405479247612 0.0 0 0.0 0.0 0.0 0.0 V 1.1077 - 16 + 1 1.139 58093.0 1.0 7272 5440 12703 HBL1_DMSO_200M_050219_1,12714 HBL1_DMSO_200M_050219_1,12714,SLPPQLRF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12715 64.698 52.0 1275600.0 25 0 106610.0 + 15422 IPPMYYATI 9 89 534.7732229410419 1067.5318929488838 2 534.7755004763603 MULTI CID FTMS 0 0 0 12703 1033982.75 0.9903339661304204 -1 0.098602294921875 12 Unmodified _IPPMYYATI_ REV__CON__ENSEMBL:ENSBTAP00000013050 19.438996006549623 0.310492472477042 3 [YN]PVS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L} 9 -1 + 51.493 0.0 0.0 4.8236 4.8236 79.656 0.0 0.0 0.0 18.025553294894152 5.172203223519531 5.172203223519531 5.172203223519531 0 0.3807196863200844 2.0 0.2614393726401688 0.0 [YN]PVS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L};[YN]PVSV[YQ]V;[YN]PVSV[YN]{I|L};[YN]PVSV[YR]A;[YN]P[QP][HV]T{I|L};[YN]PVS[RH]PV;[VP][DP]VSVP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{I|L}T][RH]SVP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[VP][DP]N{[RE]|[WV]}{[QN]|[E{I|L}]|[KN]};[VP][DP]V{[WN]|[YH]}{[QN]|[E{I|L}]|[KN]} 4.8236;4.3391;4.2221;3.8294;3.7961;3.7272;3.1038;2.3496;1.1824;0.73543 -;-;-;-;-;-;-;-;-;- 142 + 1 1.139 58588.0 1.0 7273 5440 12703 HBL1_DMSO_200M_050219_1,12715 HBL1_DMSO_200M_050219_1,12715,IPPMYYATI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12716 64.7 87.0 737250.0 25 0 73627.0 42258 VSPGLTPSL 9 83 435.7512825346927 869.4880121361854 2 435.7507812380791 MULTI CID FTMS 0 0 0 12703 932697.25 0.9942990474870608 3 -0.2332229614257812 13 Unmodified _VSPGLTPSL_ ENST00000534407.5_1_11:124757602-124761787:-|nuORF 23.1484247019978 0.2366544122328345 3 [PA]TV[PS]{I|L}[VS] 9 7 + 28.296 0.0 0.0 3.2544 3.2544 75.018 0.0 0.0 0.0 4.902401627108439 7.147642715192507 4.902401627108439 4.902401627108439 0 0.0 0.8239087409443188 1.424742501084005 0.0 [PA]TV[PS]{I|L}[VS];[PS]{I|L}A[PS]{I|L}[VS];[VG]PA{NN|[MP]|[D{I|L}]|[EV]}{I|L}[VS];[PA]GV{NN|[MP]|[D{I|L}]|[EV]}{I|L}[VS];[PA]KQQ{I|L}[VS];[VG][{I|L}A][DP]{I|L}[VS] 3.2544;2.6905;0.94549;0.70713;0.66817;0.43519 -;-;-;-;-;- 147 1 1.139 57520.2 1.0 7274 5440 12703 HBL1_DMSO_200M_050219_1,12716 HBL1_DMSO_200M_050219_1,12716,VSPGLTPSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12717 64.701 29.0 1574400.0 25 0 108460.0 + 44601 YPFKPPKI 8 80 495.29454849115496 988.57454404911 2 495.2953979372978 MULTI CID FTMS 0 0 0 12703 787675.8125 0.0799901750830214 -12 0.7158050537109375 14 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 36.04419817259434 0.3004715606373109 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 55.114 0.0 0.0 5.5751 5.5751 90.411 0.0 0.0 0.0 42.639275466122015 7.33410649039925 7.33410649039925 44.97605608137074 0 0.4247425010840047 1.3979400086720375 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};{[VA]|[{I|L}G]}{[VA]|[{I|L}G]}{I|L}K{M(Oxidation (M))|F}NQ 5.5751;1.0255 +;- + 143 + 1 1.139 40709.3 1.0 7275 5440 12703 HBL1_DMSO_200M_050219_1,12717 HBL1_DMSO_200M_050219_1,12717,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12718 64.703 83.0 924530.0 25 0 76423.0 22475 LPVLSPRPV 9 106 489.3115535494674 976.6085541657347 2 489.3112670779228 MULTI CID FTMS 0 0 0 12703 652778.5 0.8002622269120943 9 -0.7480926513671875 15 Unmodified _LPVLSPRPV_ ENST00000395407.6_1_15:69591338-69629742:+|nuORF 13.90604991867851 0.4602628045680013 3 {I|L}PP 3 6 50.445 0.0 0.0 5.1654 0.0 0.0 0.0 666.3965183559043 666.3965183559043 39.02532931189798 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PP 5.1654 - 137 + 1 1.139 61084.4 1.0 7276 5440 12703 HBL1_DMSO_200M_050219_1,12718 HBL1_DMSO_200M_050219_1,12718,LPVLSPRPV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12719 64.708 253.0 521770.0 25 0 82117.0 + + -1 RVMEYINRL 9 98 597.3265125373971 1192.638472141594 2 597.3260375857353 MULTI CID FTMS 0 0 0 12703 628394.0625 0.3086582553140933 3 -0.2332229614257812 16 2 Oxidation (M) _LRDLVKM(Oxidation (M))RM(Oxidation (M))_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 20.41453444215458 0.284085796332423 3 {I|L}RV 3 -1 24.169 0.0 0.0 2.0265 0.0 0.0 0.0 821.3594454400999 821.3594454400999 2.10863772514308 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}RV 2.0265 - 176 + 1 1.139 104233.8 1.0 7277 5440 12703 HBL1_DMSO_200M_050219_1,12719 HBL1_DMSO_200M_050219_1,12719,LRDLVKMRM False False RVMEYINRL 64.707907 597.326037585735 35056788.0 12703.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 3.070105791091919 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12720 64.713 273.0 501840.0 25 0 59426.0 + -1 LGAEGSSCNDF 11 147 578.7322000232333 1155.4498471132663 2 578.7336303591728 MULTI CID FTMS 0 0 0 12703 508001.3125 0.31456747857479 2 -0.1214523315429687 17 Carbamidomethyl (C) _LGAEGSSC(Carbamidomethyl (C))NDF_ REV__ENST00000567811.1_1_16:68398525-68404929:-|nuORF 16.149105407346934 0.6992268271266642 3 AVMDDC{M(Oxidation (M))|F}VWA 10 -1 + 55.794 0.0 0.0 4.8288 4.8288 83.332 0.0 0.0 0.0 38.40411276716473 1.3691517467963976 1.3691517467963976 9.175862737774947 0 0.4247425010840047 2.0 0.0 0.0 AVMDDC{M(Oxidation (M))|F}VWA;AVMDDC{M(Oxidation (M))|F}QEV;AVMDDC{[RE]|[WV]}A{M(Oxidation (M))|F};AVMDDC{M(Oxidation (M))|F}QD{I|L};AVMDDC{[RE]|[WV]}{M(Oxidation (M))|F}A;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{M(Oxidation (M))|F}CDDWP 4.8288;4.0346;3.8601;3.7113;3.535;0.58902 -;-;-;-;-;- 578 + 1 1.139 108349.0 1.0 7278 5440 12703 HBL1_DMSO_200M_050219_1,12720 HBL1_DMSO_200M_050219_1,12720,LGAEGSSCNDF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12721 64.718 282.0 538710.0 25 0 68059.0 + 40446 VILEGELERA 10 107 564.8169267978375 1127.6193006624749 2 564.8180419802666 MULTI CID FTMS 0 0 0 12703 478993.0 0.6271033204640534 -1 0.098602294921875 18 Unmodified _VILEGELERA_ ENSG00000167460|ENST00000643579|TPM4;ENST00000520239.1_1_8:70041855-70042335:+|nuORF;ENST00000587201.5_1_19:16187360-16198908:+|nuORF;nc|ENSG00000167460|P67936-2|TPM4 50.13029200064056 0.0793861841501087 3 V{I|L}{I|L}EGE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 10 2 + 93.326 0.0 0.0 8.2763 8.2763 82.359 0.0 0.0 0.0 49.12122126841914 9.449237304209888 9.449237304209888 0.5102999566398125 0 0.9247425010840048 2.0 0.4247425010840047 1.1237125054200234 V{I|L}{I|L}EGE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}EAD{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}ADE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}AED{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}EW{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}WE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}A{I|L}DE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}A{I|L}ED{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}EG[NP]HH{I|L};V{I|L}{I|L}EG[QT]QQ{I|L} 8.2763;8.2311;7.9664;7.9212;7.6971;7.3871;6.8794;6.8341;6.7243;6.6135 -;-;-;-;-;-;-;-;-;- 1417 + 1 1.139 121356.3 1.0 7279 5440 12703 HBL1_DMSO_200M_050219_1,12721 HBL1_DMSO_200M_050219_1,12721,VILEGELERA True True VILEGELERA 64.718151 564.818041980267 3925092.75 12703.0 ENST00000587201.5_1_19:16187360-16198908:+|nuORF;;ENSG00000167460|ENST00000643579|TPM4;;nc|ENSG00000167460|P67936-2|TPM4;;ENST00000520239.1_1_8:70041855-70042335:+|nuORF 5.280712763468425 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12722 64.724 297.0 399930.0 25 0 85814.0 301 ADSRWVRDPRY 11 85 710.8550191104753 1419.6954852877504 2 710.8541137576103 MULTI CID FTMS 0 0 0 12703 468983.125 1.0 0 0.0 19 Unmodified _ADSRWVRDPRY_ ENSG00000178974|ENST00000313833|FBXO34 5.296884461304476 0.8501568894076437 3 {M(Oxidation (M))|F} 1 11 11.783 0.0 0.0 0.82995 0.0 0.0 1254.616274937944 0.0 1254.616274937944 0.0 -2.910000986994969 -2.910000986994969 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.82995 - 49 + 1 1.139 87094.1 1.0 7280 5440 12703 HBL1_DMSO_200M_050219_1,12722 HBL1_DMSO_200M_050219_1,12722,ADSRWVRDPRY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12723 64.729 298.0 412130.0 25 0 23545.0 + -1 MPMQDIKMI 9 166 561.7711860056291 1121.5278190780582 2 561.7728149294853 MULTI CID FTMS 0 0 0 12703 392706.0 0.8061192900274925 4 -0.3166961669921875 20 Oxidation (M) _MPM(Oxidation (M))QDIKMI_ ENSG00000185686|ENST00000405655|PRAME 32.78568957990786 0.1150597335874693 3 MNV[C(Carbamidomethyl (C))N]{I|L}KM{I|L} 9 -1 + 38.387 0.0 0.0 3.4227 3.4227 72.77 0.0 0.0 0.0 5.969100130080562 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 1.3807196863200843 0.0 0.0 0.0 MNV[C(Carbamidomethyl (C))N]{I|L}KM{I|L};MNV[C(Carbamidomethyl (C))N]{I|L}K{M(Oxidation (M))|F}P;MN[{I|L}A]M[NG]KM{I|L};[YV]K{I|L}MP[C(Carbamidomethyl (C))D]P;MN[{I|L}A]M[NG]K{M(Oxidation (M))|F}P;MNV{[ES]|[DT]|[{I|L}C]}[NG]KM{I|L};MGGV[C(Carbamidomethyl (C))N]{I|L}KM{I|L};MNV{[ES]|[DT]|[{I|L}C]}[NG]K{M(Oxidation (M))|F}P;[YV]K{I|L}D{I|L}[C(Carbamidomethyl (C))D]P;MGGV[C(Carbamidomethyl (C))N]{I|L}K{M(Oxidation (M))|F}P 3.4227;3.1543;3.1181;2.8905;2.8497;2.6927;2.6017;2.4243;2.3537;2.3333 -;-;-;-;-;-;-;-;-;- 2508 + 1 1.139 97100.9 1.0 7281 5440 12703 HBL1_DMSO_200M_050219_1,12723 HBL1_DMSO_200M_050219_1,12723,MPMQDIKMI False False MPMQDIKMI 64.729053 561.772814929485 6728423.0 12703.0 ENSG00000185686|ENST00000405655|PRAME 4.417914867401123 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12725 64.733 16.0 2829900.0 25 0 315420.0 + 37314 TISQATLTL 9 81 474.2739603482278 946.5333677632556 2 474.2741882205009 MULTI CID FTMS 0 0 0 12724 3484958.5 0.7630714770010036 1 -0.0706787109375 1 Unmodified _TISQATLTL_ ENSG00000181143|ENST00000397910|MUC16 32.30548876998284 0.1201446275138228 3 [{I|L}T]SAAA{I|L}ST{I|L} 10 3 + 49.152 0.0 0.0 5.1928 5.1928 82.195 0.0 0.0 0.0 14.771212547196626 30.15051660939256 14.771212547196626 6.53212513775344 0 0.8182503180159344 1.3979400086720375 1.2887254899964358 0.0 [{I|L}T]SAAA{I|L}ST{I|L};[{I|L}T]S{[NV]|[RG]}{I|L}ST{I|L};[{I|L}T]K[DG]{I|L}ST{I|L};{[MG]|[TS]}{I|L}AAA{I|L}ST{I|L};[{I|L}T]SP[KT]ST{I|L};{[DS]|[MA]|[CV]|TT}RR{I|L}ST{I|L};[{I|L}T][VG][SG]{I|L}ST{I|L};[TP]S[KT]{I|L}ST{I|L};{[MG]|[TS]}{I|L}{[NV]|[RG]}{I|L}ST{I|L};{[MG]|[TS]}P[KT]{I|L}ST{I|L} 5.1928;4.5027;3.9038;3.3272;3.3049;3.2417;3.0853;2.6836;2.6371;2.6129 -;-;-;-;-;-;-;-;-;- 476 1 1.139 42000.0 1.0 7282 5441 12724 HBL1_DMSO_200M_050219_1,12725 HBL1_DMSO_200M_050219_1,12725,TISQATLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12726 64.734 36.0 1100000.0 25 0 65567.0 24582 MLHSIDWMD 9 94 574.2492149468575 1146.4838769605149 2 574.2499267458916 MULTI CID FTMS 0 0 0 12724 1511611.25 1.0 0 0.0 2 Unmodified _MLHSIDWMD_ ENSG00000070182|ENST00000644917|SPTB;nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB 16.149105407346934 0.3995459350917656 3 [H{I|L}]SP{M(Oxidation (M))|F} 5 5 44.182 0.0 0.0 3.8537 0.0 0.0 0.0 562.164353192004 562.164353192004 19.740830505375865 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.6747425010840047 0.0 [H{I|L}]SP{M(Oxidation (M))|F} 3.8537 - 204 1 1.139 36698.1 1.0 7283 5441 12724 HBL1_DMSO_200M_050219_1,12726 HBL1_DMSO_200M_050219_1,12726,MLHSIDWMD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12727 64.736 1.9 23256000.0 25 0 3221600.0 + 38066 TPHDFIEHI 9 66 370.18569532424215 1107.5352565729263 3 370.1857177615166 MULTI CID FTMS 0 0 0 12724 18823838.0 1.0 0 0.0 3 Unmodified _TPHDFIEHI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 43.85829265575387 0.0542763391141878 3 TPHD{M(Oxidation (M))|F}{I|L}E[H{I|L}] 9 0 + 58.638 0.0 0.0 5.2945 5.2945 88.477 0.0 0.0 0.0 42.44009708316895 5.642492736872597 5.642492736872597 22.21848749616356 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + + TPHD{M(Oxidation (M))|F}{I|L}E[H{I|L}];T[WY]{M(Oxidation (M))|F}{I|L}E[H{I|L}] 5.2945;3.2883 +;- + 208 + 1 1.139 45457.7 1.0 7284 5441 12724 HBL1_DMSO_200M_050219_1,12727 HBL1_DMSO_200M_050219_1,12727,TPHDFIEHI True True TPHDFIEHI 64.735503 370.185717761517 171034968.0 12724.0 ENST00000536795.1_1_12:4387934-4398180:+|nuORF;;ENSG00000118971|ENST00000261254|CCND2 7.683011054992676 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12728 64.737 61.0 1219000.0 25 0 104460.0 + 25289 NAAIIMKV 8 106 430.2570666651757 858.4995803971515 2 430.2574645876884 MULTI CID FTMS 0 0 0 12724 1073383.25 1.0 0 0.0 4 Unmodified _NAAIIMKV_ ENSG00000130755|ENST00000597595|GMFG 48.345845343767074 0.1470278396477103 3 {[QG]|[NA]}A{I|L}{I|L}MKV 8 0 + 61.891 0.0 0.0 7.2092 7.2092 83.236 0.0 0.0 0.0 17.20667748014435 2.373609157946035 2.373609157946035 2.373609157946035 0 1.0189301784845295 1.6989700043360187 0.0 0.0 + + {[QG]|[NA]}A{I|L}{I|L}MKV;{[QG]|[NA]}A{I|L}{I|L}MVK 7.2092;6.9327 +;- + 96 + 1 1.139 63679.2 1.0 7285 5441 12724 HBL1_DMSO_200M_050219_1,12728 HBL1_DMSO_200M_050219_1,12728,NAAIIMKV False True NAAIIMKV 64.737007 430.257464587688 6111098.5 12724.0 ENSG00000130755|ENST00000597595|GMFG 6.266172726949056 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12729 64.738 37.0 1238600.0 25 0 85358.0 15134 INRLPANLL 9 94 512.3188478340669 1022.6231427349338 2 512.3193237185478 MULTI CID FTMS 0 0 0 12724 779601.5 0.4933715976149744 2 -0.1824493408203125 5 Unmodified _INRLPANLL_ ENSG00000080845|ENST00000339266|DLGAP4;nc|ENSG00000080845|Q9Y2H0-1|DLGAP4 12.531546534597751 0.4974689918368763 3 VAQ{I|L} 4 7 18.628 0.0 0.0 1.8216 0.0 0.0 593.3671742169937 0.0 593.3671742169937 0.0 4.648415687162952 0.0 0.0 0 0.242992819099939 0.0 0.0 0.0 VAQ{I|L} 1.8216 - 121 1 1.139 39993.6 1.0 7286 5441 12724 HBL1_DMSO_200M_050219_1,12729 HBL1_DMSO_200M_050219_1,12729,INRLPANLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12730 64.744 320.0 350360.0 25 0 20506.0 19463 LFFKKKFQERL 11 96 742.4456123882863 0 742.4461547732353 PEAK CID FTMS 0 0 0 12724 352660.03125 0.9424908835759382 1 -0.0706787109375 6 Unmodified _LFFKKKFQERL_ ENSG00000146122|ENST00000274867|DAAM2;nc|ENSG00000146122|Q86T65-4|DAAM2 3.2813086475875832 0.4761840153648598 3 VAV{I|L}H 5 11 24.068 0.0 0.0 1.6231 0.0 0.0 759.4493779974727 201.08802210025627 960.5374000977288 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VAV{I|L}H 1.6231 - 919 + 1 1.139 83091.5 1.0 7287 5441 12724 HBL1_DMSO_200M_050219_1,12730 HBL1_DMSO_200M_050219_1,12730,LFFKKKFQERL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12731 64.75 337.0 265120.0 25 0 28208.0 -1 0 104 909.92997455603 1817.84539617886 2 910.4328491091728 MULTI CID FTMS 0 0 0 12724 373031.96875 1.0 0 0.0 7 3 [NP]{I|L}NQ[DP]{I|L}GDAN{I|L}DP[EP] 17 -1 + 46.472 0.0 0.0 2.5564 2.5564 72.31 0.0 0.0 0.0 7.695510786217255 33.9233645549063 7.695510786217255 3.71611069949688 0 0.3807196863200844 0.0 0.0 0.0 [NP]{I|L}NQ[DP]{I|L}GDAN{I|L}DP[EP];[NP]{I|L}NQ[DP]{I|L}GWN{I|L}DP[EP];[NP]{I|L}NQ[DP]{I|L}GDAN{I|L}DV[HS];[NP]{I|L}NW[PG]{I|L}GDAN{I|L}DP[EP];[NP]{I|L}NQ[DP]{I|L}GDY{I|L}HP[EP];[NP]{I|L}NQ[DP]{I|L}GDAD{[QV]|[N{I|L}]|[RA]|[KV]}P[EP];[NP]{I|L}NQ[DP]{I|L}GWN{I|L}DV[HS];[NP]{I|L}GGQ[DP]{I|L}GDAN{I|L}DP[EP];[NP]{I|L}NQ[DP]{I|L}GDAGG{I|L}DP[EP];[NP]{I|L}N[AG][DP]{I|L}GDAN{I|L}DP[EP] 2.5564;2.352;2.3206;2.2939;2.2394;2.1186;2.1162;2.0614;2.0614;2.0614 -;-;-;-;-;-;-;-;-;- 2034 1 1.139 64795.5 1.0 7288 5441 12724 HBL1_DMSO_200M_050219_1,12731 HBL1_DMSO_200M_050219_1,12731, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12732 64.758 411.0 471900.0 25 0 33878.0 24583 MLHSIDWMD 9 222 383.1684807656409 1146.4836128971226 3 383.1677123904228 MULTI CID FTMS 0 0 0 12724 371509.75 1.0 0 0.0 8 Unmodified _MLHSIDWMD_ ENSG00000070182|ENST00000644917|SPTB;nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB 8.155526934196011 0.6299788542272896 3 [H{I|L}]M{I|L}S 5 6 26.08 0.0 0.0 2.2748 0.0 0.0 0.0 562.1607972443355 562.1607972443355 1.6182308023022642 0.0 0.0 0.0 0 0.3807196863200844 0.9208187539523752 0.2887254899964357 0.0 [H{I|L}]M{I|L}S 2.2748 - 1340 1 1.139 157021.2 1.0 7289 5441 12724 HBL1_DMSO_200M_050219_1,12732 HBL1_DMSO_200M_050219_1,12732,MLHSIDWMD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12733 64.761 187.0 257130.0 25 0 22563.0 22495 LPVPSPSL 8 89 405.24183436984697 808.469115806494 2 405.2411376833916 MULTI CID FTMS 0 0 0 12724 301685.65625 0.7752131507917638 11 -0.89990234375 9 Unmodified _LPVPSPSL_ ENST00000409443.6_1_2:172016940-172017408:-|nuORF;ENST00000565074.1_1_15:75501395-75501497:+|nuORF;REV__ENST00000440859.7_1_7:107384288-107384348:+|nuORF 42.96799951952854 0.1846367511955703 3 [PS]VP{I|L}PS{I|L} 8 2 [PS]VP{I|L} + + 22.158 -0.25068 -0.050818 2.7408 2.7408 49.726 0.0 0.0 0.0 0.0 10.564542569568667 0.0 0.0 0 0.4247425010840047 0.0 0.6139829889124311 0.0 [PS]VP{I|L}PS{I|L} 2.7408 - 79 + 1 1.139 41859.8 1.0 7290 5441 12724 HBL1_DMSO_200M_050219_1,12733 HBL1_DMSO_200M_050219_1,12733,LPVPSPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12734 64.768 364.0 229180.0 25 0 16512.0 -1 YLHRGRCFDEC 11 99 756.8283806389578 1511.6422083447155 2 756.8282958865166 MULTI CID FTMS 0 0 0 12724 258583.84375 0.4146258027888975 1 -0.0706787109375 10 2 Carbamidomethyl (C) _YLHRGRC(Carbamidomethyl (C))FDEC(Carbamidomethyl (C))_ ENSG00000147655|ENST00000276659|RSPO2;nc|ENSG00000147655|Q6UXX9-2|RSPO2;nc|ENSG00000147655|Q6UXX9-3|RSPO2 2.9952420565917617 0.861016188266951 3 [YQ][HS]EAQQNA 10 -1 45.864 0.0 0.0 3.034 0.0 0.0 0.0 352.1273362184856 352.1273362184856 25.141048209728325 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YQ][HS]EAQQNA 3.034 - 1281 1 1.139 61100.2 1.0 7291 5441 12724 HBL1_DMSO_200M_050219_1,12734 HBL1_DMSO_200M_050219_1,12734,YLHRGRCFDEC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12735 64.775 427.0 286060.0 25 0 27592.0 + 22215 IPVTMRAI 8 152 450.77140730086063 0 450.7704955935478 PEAK CID FTMS 0 0 0 12724 210272.8125 0.8059449478824711 2 -0.1824493408203125 11 Unmodified _LPRCILSV_ ENSG00000125686|ENST00000300651|MED1;nc|ENSG00000125686|Q15648-3|MED1 23.1484247019978 0.3584660196589264 3 PVT 3 7 20.005 0.0 0.0 2.224 0.0 0.0 113.08524222657884 486.2528780572876 599.3381202838664 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.0 PVT 2.224 - 133 + 1 1.139 97226.8 1.0 7292 5441 12724 HBL1_DMSO_200M_050219_1,12735 HBL1_DMSO_200M_050219_1,12735,LPRCILSV False False IPVTMRAI 64.775278 450.770495593548 28107700.0 12724.0 ENSG00000125686|ENST00000300651|MED1;;nc|ENSG00000125686|Q15648-3|MED1 1.0700743993123372 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12736 64.783 415.0 223610.0 25 0 28848.0 -1 0 94 978.7859788322608 2933.3361070969822 3 979.4560424685478 MULTI CID FTMS 0 0 0 12724 207908.859375 0.6180937162499565 1 -0.0706787109375 12 3 S 1 -1 6.9897 0.0 0.0 0.23829 0.0 0.0 2489.112762225692 354.1674898736938 2843.280252099385 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.23829 - 359 + 1 1.139 68080.2 1.0 7293 5441 12724 HBL1_DMSO_200M_050219_1,12736 HBL1_DMSO_200M_050219_1,12736, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12737 64.792 504.0 204150.0 25 0 9465.5 + 43446 WTAELGIRHV 10 170 394.5523982146847 1180.635365244254 3 394.5524474978447 MULTI CID FTMS 0 0 0 12724 178705.34375 0.2771148565640103 3 -0.2659225463867187 13 Unmodified _WTAELGIRHV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 13.042465956692816 0.6287021003332052 3 V 1 9 15.485 0.0 0.0 1.3115 0.0 0.0 1063.555758165932 0.0 1063.555758165932 0.0 6.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.3115 + + 175 + 1 1.139 83842.8 1.0 7294 5441 12724 HBL1_DMSO_200M_050219_1,12737 HBL1_DMSO_200M_050219_1,12737,WTAELGIRHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12738 64.8 381.0 132870.0 25 0 11718.0 -1 0 80 714.5914880404155 0 714.8949462771416 PEAK CID FTMS 0 0 0 -1 0 14 3 A 1 -1 6.9897 0.0 0.0 0.48976 0.0 0.0 1191.0521491991915 162.05640588931877 1353.1085550885105 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.48976 - 10 + 1 1.139 40664.7 1.0 7295 5441 12724 HBL1_DMSO_200M_050219_1,12738 HBL1_DMSO_200M_050219_1,12738, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12740 64.804 12.0 3574100.0 25 0 498530.0 + 35775 SVIPQIQKV 9 57 506.3135985179971 1010.6126441027942 2 506.3141662478447 MULTI CID FTMS 0 0 0 12739 5959329.0 0.7057711459401805 1 -0.1117706298828125 1 Unmodified _SVIPQIQKV_ ENSG00000151876|ENST00000281623|FBXO4;nc|ENSG00000151876|Q9UKT5-2|FBXO4 25.399314129420983 0.2080152500878129 3 [VS]{I|L} 3 6 36.695 0.0 0.0 3.6309 0.0 0.0 0.0 708.4066338980161 708.4066338980161 10.663931154357796 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + [VS]{I|L} 3.6309 + + 96 + 1 1.122 38102.8 1.0 7296 5442 12739 HBL1_DMSO_200M_050219_1,12740 HBL1_DMSO_200M_050219_1,12740,SVIPQIQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12741 64.805 32.0 2312000.0 25 0 200250.0 + 44521 YPDRNLPTI 9 98 544.7897074529764 1087.5648619727526 2 544.7901489138603 MULTI CID FTMS 0 0 0 12739 2665868.25 0.3671056338765186 6 -0.5800399780273438 2 Unmodified _YPDRNLPTI_ ENSG00000115539|ENST00000264254|PDCL3 67.83816525789305 0.0219346420158844 3 YPDKK[HS]T{I|L} 9 4 + 50.205 0.0 0.0 4.6163 4.6163 73.364 0.0 0.0 0.0 3.126167147517279 1.3652545569604655 1.3652545569604655 1.3652545569604655 0 0.7614393726401688 1.6989700043360187 0.6549471895720985 0.0 YPDKK[HS]T{I|L};[TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}PT{I|L}Y;[TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}PTY{I|L};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}PT{I|L}Y;[TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}YPT{I|L};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}PTY{I|L};YPDKK[HT]S{I|L};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}YPT{I|L};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}Y{I|L}PT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DRN{I|L}PT{I|L} 4.6163;4.4907;4.3288;4.2503;4.1065;4.0884;3.8857;3.8661;3.4274;3.3336 -;-;-;-;-;-;-;-;-;+ + 708 + 1 1.122 62149.1 1.0 7297 5442 12739 HBL1_DMSO_200M_050219_1,12741 HBL1_DMSO_200M_050219_1,12741,YPDRNLPTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12742 64.806 32.0 2813100.0 25 0 201730.0 + 9819 FPDPNVKYV 9 88 539.7821390043049 1077.5497250754097 2 539.7824584841728 MULTI CID FTMS 0 0 0 12739 2074200.5 0.3537894194440175 6 -0.5800399780273438 3 Unmodified _FPDPNVKYV_ ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF 57.24910588100465 0.0276051374632116 3 {M(Oxidation (M))|F}PDPNVKYV 9 0 + 64.0 0.0 0.0 5.9394 5.9394 77.106 0.0 0.0 0.0 0.911290632962718 0.911290632962718 0.911290632962718 0.911290632962718 0 2.397940008672037 0.0 0.0 0.0 + + {M(Oxidation (M))|F}PDPNVKYV;[DP]NVP{M(Oxidation (M))|F}KYV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DPNVKYV;[DP]{M(Oxidation (M))|F}PNVKYV;[DP]NVPKY{M(Oxidation (M))|F}V;[DP]NVPK{M(Oxidation (M))|F}YV;{M(Oxidation (M))|F}PDPGGVKYV;[DP]NVKYP{M(Oxidation (M))|F}V;[DP]GGVP{M(Oxidation (M))|F}KYV;[DP]NVP{[HG]|PP}P{M(Oxidation (M))|F}V 5.9394;5.8548;5.6044;5.5595;5.3908;5.2221;5.0848;5.0681;5.0003;4.9357 +;-;+;-;-;-;-;-;-;- + 1477 + 1 1.122 78444.6 1.0 7298 5442 12739 HBL1_DMSO_200M_050219_1,12742 HBL1_DMSO_200M_050219_1,12742,FPDPNVKYV True True FPDPNVKYV 64.806177 539.782458484173 537065440.0 12739.0 ENST00000529476.1_1_1:161011414-161013065:-|nuORF;;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;;ENSG00000158773|ENST00000368021|USF1 7.288880030314128 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12743 64.807 43.0 2443600.0 25 0 278930.0 + 30818 RIIDVVYNA 9 103 531.8007244008267 1061.5868958684532 2 531.8003417849541 MULTI CID FTMS 0 0 0 12739 1833070.0 0.0178470311774657 6 -0.5800399780273438 4 Unmodified _RIIDVVYNA_ ENSG00000142937|ENST00000396651|RPS8 20.41453444215458 0.284085796332423 3 DYVV[HT]K{I|L} 8 8 33.665 0.0 0.0 3.1711 0.0 0.0 88.05889401474072 0.0 88.05889401474072 0.0 21.446020033459305 0.0 0.0 0 0.5 0.0 0.0 0.3494850021680094 DYVV[HT]K{I|L} 3.1711 - 162 + 1 1.122 85537.2 1.0 7299 5442 12739 HBL1_DMSO_200M_050219_1,12743 HBL1_DMSO_200M_050219_1,12743,RIIDVVYNA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12744 64.809 65.0 1848900.0 25 0 208530.0 23569 LTMKRNEMI 9 124 568.2991996791862 1134.5838464251724 2 568.2996703982353 MULTI CID FTMS 0 0 0 12739 1604519.875 0.1032211599019742 12 -0.9444427490234376 5 Unmodified _LTMKRNEMI_ ENSG00000188171|ENST00000601440|ZNF626;ENST00000595094.1_1_19:20736613-20844252:-|nuORF;nc|ENSG00000188171|Q68DY1-3|ZNF626 16.942295170755138 0.3780752226737986 3 [VP]SG{M(Oxidation (M))|F}V{I|L}T{I|L} 9 8 39.189 0.0 0.0 3.454 0.0 0.0 0.0 218.0610896705425 218.0610896705425 16.17610025621014 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.8807196863200843 0.0 [VP]SG{M(Oxidation (M))|F}V{I|L}T{I|L} 3.454 - 1935 1 1.122 95311.2 1.0 7300 5442 12739 HBL1_DMSO_200M_050219_1,12744 HBL1_DMSO_200M_050219_1,12744,LTMKRNEMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12745 64.81 27.0 1642400.0 25 0 136920.0 + 26282 NQTPVTLQV 9 86 500.276835462788 998.539117992376 2 500.2783080935478 MULTI CID FTMS 0 0 0 12739 899716.5 0.0504358922067352 -4 0.2968978881835937 6 Unmodified _NQTPVTLQV_ ENSG00000063244|ENST00000308924|U2AF2;nc|ENSG00000063244|P26368-2|U2AF2 19.256988751693697 0.3154191944385105 3 {[QN]|[E{I|L}]|[KN]}T 3 6 19.621 0.0 0.0 1.965 0.0 0.0 0.0 652.3663634359884 652.3663634359884 7.631288188505682 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 + {[QN]|[E{I|L}]|[KN]}T 1.965 + + 76 1 1.122 38599.7 1.0 7301 5442 12739 HBL1_DMSO_200M_050219_1,12745 HBL1_DMSO_200M_050219_1,12745,NQTPVTLQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12746 64.815 276.0 353270.0 25 0 46457.0 -1 0 88 964.4450831006824 2890.313419902247 3 965.1151000857352 MULTI CID FTMS 0 0 0 12739 833249.9375 0.7451069518059065 2 -0.1952438354492187 7 3 D{[YD]|[{M(Oxidation (M))|F}M]}{I|L}PN{[QN]|[E{I|L}]|[KN]} 8 -1 29.385 0.0 0.0 1.0167 0.0 0.0 1912.958299705275 0.0 1912.958299705275 0.0 11.436303437153295 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 D{[YD]|[{M(Oxidation (M))|F}M]}{I|L}PN{[QN]|[E{I|L}]|[KN]} 1.0167 - 232 1 1.122 74627.1 1.0 7302 5442 12739 HBL1_DMSO_200M_050219_1,12746 HBL1_DMSO_200M_050219_1,12746, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12747 64.817 56.0 1660700.0 25 0 208370.0 + 37005 TFPNGVKGL 9 95 466.7639271883791 931.5133014435582 2 466.7643310427666 MULTI CID FTMS 0 0 0 12739 832867.625 0.5757914826524321 1 -0.1117706298828125 8 Unmodified _TFPNGVKGL_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 34.10243960390752 0.1078313939113124 3 KRNPET 6 8 34.28 0.0 0.0 3.68 0.0 0.0 188.1167927472672 0.0 188.1167927472672 0.0 14.651778472130168 0.0 0.0 0 0.5044321917401079 0.0 0.0 0.805462187404089 KRNPET 3.68 - 174 1 1.122 73980.3 1.0 7303 5442 12739 HBL1_DMSO_200M_050219_1,12747 HBL1_DMSO_200M_050219_1,12747,TFPNGVKGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12748 64.822 301.0 533370.0 25 0 33904.0 + 31175 RLPGGNEIGMV 11 154 571.8033671742411 1141.592181415282 2 571.8036987185478 MULTI CID FTMS 0 0 0 12739 536276.4375 1.0 0 0.0 9 Unmodified _RLPGGNEIGMV_ ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085|ACACA 49.52724829834842 0.1202481389936634 3 [R{I|L}][NP]NE{I|L}GMV 10 2 + 65.666 0.0 0.0 5.7521 5.7521 86.36 0.0 0.0 0.0 11.113776789709142 16.53212513775344 11.113776789709142 9.164539485499256 0 1.6307196863200843 1.0457574905606752 0.0 0.3494850021680094 [R{I|L}][NP]NE{I|L}GMV;[R{I|L}][NP]GGE{I|L}GMV;[{I|L}P][RN]NE{I|L}GMV;[R{I|L}][WP][NG]{I|L}GMV;[R{I|L}][DN][QP]{I|L}GMV;[VG]A[RP]NE{I|L}GMV;[{I|L}P][RN]GGE{I|L}GMV;[{I|L}P]{[QG]|[NA]}[QA]E{I|L}GMV;{[QV]|[N{I|L}]|[RA]|[KV]}[RP]NE{I|L}GMV;[R{I|L}][WP]{[{M(Oxidation (M))|F}H]|[RQ]}GMV 5.7521;4.9493;4.7786;4.509;4.509;4.1482;3.9758;3.7522;3.6947;3.6519 -;-;-;-;-;-;-;-;-;- 1311 1 1.122 124586.2 1.0 7304 5442 12739 HBL1_DMSO_200M_050219_1,12748 HBL1_DMSO_200M_050219_1,12748,RLPGGNEIGMV True True RLPGGNEIGMV 64.82219 571.803698718548 3187417.5 12739.0 nc|ENSG00000278540|Q13085-2|ACACA;;nc|ENSG00000278540|Q13085|ACACA;;nc|ENSG00000278540|Q13085-3|ACACA;;ENSG00000278540|ENST00000616317|ACACA 7.098996321360271 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12749 64.828 345.0 537730.0 25 0 34966.0 + -1 SQVDLSANL 9 142 946.4338529237544 1890.8531529143088 2 946.434619128704 MULTI CID FTMS 0 0 0 12739 519057.40625 0.4326294072111513 2 -0.1952438354492187 10 nc|ENSG00000140853|Q86WI3-6|NLRC5;ENSG00000140853|ENST00000688547|NLRC5;nc|ENSG00000140853|Q86WI3-2|NLRC5;ENST00000538930.5_1_16:57075247-57096263:+|nuORF 3 [MN]PN{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]} 16 -1 + 106.39 0.0 0.0 5.6264 5.6264 85.504 0.0 0.0 0.0 19.005746398831093 16.312733605149177 16.312733605149177 9.013902021140495 0 2.677825934852436 1.5228787452803376 1.341129063296272 0.9802046884880936 [MN]PN{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEEQ[VG]DG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEE[AG]RDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PGG{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}GGEEQRDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}N{M(Oxidation (M))|F}D[KC]S{I|L}[PA]{I|L}{[QS]|[NT]};[MN]PN{I|L}N{M(Oxidation (M))|F}D{[QC]|[C(Carbamidomethyl (C))A]}S{I|L}[PA]{I|L}{[QS]|[NT]};[MN][{I|L}P]NNEEQRDG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEEQRDG{M(Oxidation (M))|F}T{[QV]|[N{I|L}]|[RA]|[KV]};[MN]PN{I|L}NEE[AG][VG]DG{M(Oxidation (M))|F}{I|L}{[QS]|[NT]} 5.6264;5.1497;5.1497;5.1497;5.1497;4.9062;4.9062;4.7916;4.6978;4.6738 -;-;-;-;-;-;-;-;-;- 23052 + 1 1.122 121472.7 1.0 7305 5442 12739 HBL1_DMSO_200M_050219_1,12749 HBL1_DMSO_200M_050219_1,12749, False False SQVDLSANL 64.828453 946.434619128704 345360.0625 12739.0 nc|ENSG00000140853|Q86WI3-6|NLRC5;;ENSG00000140853|ENST00000688547|NLRC5;;nc|ENSG00000140853|Q86WI3-2|NLRC5;;ENST00000538930.5_1_16:57075247-57096263:+|nuORF -0.1029420296351115 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12750 64.834 315.0 789170.0 25 0 62222.0 + + -1 RVINSIPLA 9 178 491.8060988324061 981.5976447316124 2 491.8063537478447 MULTI CID FTMS 0 0 0 12739 483618.96875 0.9164027840611668 1 -0.1117706298828125 11 Oxidation (M) _VLLM(Oxidation (M))IPPAL_ nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-2|CEP57;ENSG00000166037|ENST00000325542|CEP57 20.871210003555333 0.2717241269066626 3 VTV{I|L}[RN]PA{I|L} 9 -1 + 31.683 0.0 0.0 3.2277 3.2277 76.121 0.0 0.0 0.0 9.235703189660857 1.142321626648691 1.142321626648691 6.197887582883933 0 0.0924778212679485 0.5686362358410126 0.0 0.0 VTV{I|L}[RN]PA{I|L};VTV{I|L}[RN]P{I|L}A;V{I|L}{I|L}S[RN]PA{I|L};V{I|L}{I|L}S[RN]P{I|L}A;VTV{I|L}[RN]{I|L}PA;V{I|L}{I|L}S[RN]{I|L}PA 3.2277;2.5963;2.2326;1.6012;1.6002;0.60519 -;-;-;-;-;- 665 + 1 1.122 187815.0 1.0 7306 5442 12739 HBL1_DMSO_200M_050219_1,12750 HBL1_DMSO_200M_050219_1,12750,VLLMIPPAL False False RVINSIPLA 64.834188 491.806353747845 5782557.5 12739.0 nc|ENSG00000166037|Q86XR8-4|CEP57;;nc|ENSG00000166037|Q86XR8-5|CEP57;;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;;nc|ENSG00000166037|Q86XR8-2|CEP57;;ENSG00000166037|ENST00000325542|CEP57 -0.404495894908905 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12751 64.84 329.0 618240.0 25 0 46361.0 + -1 IPKFVVLC 8 180 488.2901227975792 974.5656926619585 2 489.2932311892509 MULTI CID FTMS 0 0 0 12739 412728.25 0.4375999255166207 6 -0.5800399780273438 12 Carbamidomethyl (C) _IPKFVVLC(Carbamidomethyl (C))_ REV__ENSG00000171860|ENST00000307637|C3AR1 11.114462752807354 0.7467182956244686 3 [{I|L}P]WW 4 -1 29.693 0.0 0.0 3.0468 0.0 0.0 0.0 389.24401232432086 389.24401232432086 14.810698215154703 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P]WW 3.0468 - 576 1 1.122 155733.1 1.0 7307 5442 12739 HBL1_DMSO_200M_050219_1,12751 HBL1_DMSO_200M_050219_1,12751,IPKFVVLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12752 64.848 410.0 618940.0 25 0 145220.0 -1 0 127 1045.4160564397785 2088.817559946357 2 1045.918872058392 MULTI CID FTMS 0 0 0 12739 391080.125 0.7206949688037336 -1 0.0706787109375 13 3 [YQ]{I|L}ENY[DC]{[{M(Oxidation (M))|F}C]|[YS]}YD 12 -1 78.061 0.0 0.0 3.7371 0.0 0.0 0.0 529.2131653070022 529.2131653070022 43.71153516440246 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.5941876774005248 3.1791746928241125 [YQ]{I|L}ENY[DC]{[{M(Oxidation (M))|F}C]|[YS]}YD 3.7371 - 4334 1 1.122 169952.8 1.0 7308 5442 12739 HBL1_DMSO_200M_050219_1,12752 HBL1_DMSO_200M_050219_1,12752, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12753 64.855 393.0 307240.0 25 0 22099.0 14008 IADYFETSSQC 11 129 632.2617136474157 0 632.2619506716728 PEAK CID FTMS 0 0 0 12739 286122.65625 0.9080103412474811 -1 0.0706787109375 14 Unmodified _IADYFETSSQC_ ENSG00000276085|ENST00000619989|CCL3L3;ENSG00000277632|ENST00000613922|CCL3 21.53697664764585 0.3337597044351383 3 A{I|L}DD 4 10 37.735 0.0 0.0 2.9889 0.0 0.0 113.0855976530832 732.2265608770471 845.3121585301303 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.4559771852360797 0.0 A{I|L}DD 2.9889 - 95 + 1 1.122 104597.5 1.0 7309 5442 12739 HBL1_DMSO_200M_050219_1,12753 HBL1_DMSO_200M_050219_1,12753,IADYFETSSQC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12754 64.861 382.0 453300.0 25 0 60919.0 + 12598 GVIPAEKIDGV 11 157 549.3132570889894 1096.6119612447787 2 549.3130370974541 MULTI CID FTMS 0 0 0 12739 266741.125 0.2833423479651419 -2 0.1214523315429687 15 Unmodified _GVIPAEKIDGV_ ENSG00000163918|ENST00000296273|RFC4;ENST00000479307.5_1_3:186508099-186512490:-|nuORF 33.4449034751529 0.3133739643825231 3 [VG]{I|L}PAE 6 5 53.677 0.0 0.0 4.8948 0.0 0.0 0.0 527.2857140575421 527.2857140575421 5.809159218443796 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.7302046884880937 0.0 + [VG]{I|L}PAE 4.8948 + + 2904 + 1 1.122 134668.0 1.0 7310 5442 12739 HBL1_DMSO_200M_050219_1,12754 HBL1_DMSO_200M_050219_1,12754,GVIPAEKIDGV False True GVIPAEKIDGV 64.861436 549.313037097454 6041567.0 12739.0 ENSG00000163918|ENST00000296273|RFC4;;ENST00000479307.5_1_3:186508099-186512490:-|nuORF 5.7799506187438965 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12755 64.87 406.0 221930.0 25 0 17410.0 -1 0 124 603.9675200152114 1808.8807306458343 3 603.9672729372978 MULTI CID FTMS 0 0 0 12739 243168.53125 0.0531368351695993 19 -1.5392227172851562 16 3 [H{I|L}][YR]{I|L}QDDWWH{I|L}Q 13 -1 + 51.731 0.0 0.0 2.8598 2.8598 82.177 0.0 0.0 0.0 15.188676982289005 28.79943829226658 15.188676982289005 29.61603609085694 0 0.7429928190999391 1.6989700043360187 0.0 0.6109243748081782 [H{I|L}][YR]{I|L}QDDWWH{I|L}Q;[Q{I|L}][{I|L}T]N{I|L}QDDWWH{I|L}Q;[NP]{I|L}H{I|L}NEY[DG]{M(Oxidation (M))|F}{I|L}H{I|L}K;[AG]{I|L}[{I|L}T]N{I|L}QDDWWH{I|L}Q;[NP]{I|L}H{I|L}[HV]DDWWH{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}QVP[R{M(Oxidation (M))|F}]C(Carbamidomethyl (C))H{M(Oxidation (M))|F}{I|L}H{I|L}K;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VP[R{M(Oxidation (M))|F}]C(Carbamidomethyl (C))H{M(Oxidation (M))|F}{I|L}H{I|L}K;{[QN]|[E{I|L}]|[KN]}NVP[R{M(Oxidation (M))|F}]C(Carbamidomethyl (C))H{M(Oxidation (M))|F}{I|L}H{I|L}K;[Q{I|L}]DVP[R{M(Oxidation (M))|F}]C(Carbamidomethyl (C))H{M(Oxidation (M))|F}{I|L}H{I|L}K;[AG]D{I|L}VP[R{M(Oxidation (M))|F}]C(Carbamidomethyl (C))H{M(Oxidation (M))|F}{I|L}H{I|L}K 2.8598;1.2226;1.1454;0.99584;0.72373;0.45404;0.43315;0.39614;0.34953;0.2064 -;-;-;-;-;-;-;-;-;- 1152 1 1.122 73738.5 1.0 7311 5442 12739 HBL1_DMSO_200M_050219_1,12755 HBL1_DMSO_200M_050219_1,12755, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12756 64.88 550.0 282470.0 25 0 19061.0 + 30800 RIFPNQTEEL 10 159 623.8246925377081 0 623.8234130740166 PEAK CID FTMS 0 0 0 12739 247479.609375 0.8688232629480966 1 -0.1117706298828125 17 Unmodified _RIFPNQTEEL_ ENSG00000124733|ENST00000244711|MEA1 53.40400417844725 0.0334336717583275 3 EETQ[NP]{M(Oxidation (M))|F} 7 9 41.757 0.0 0.0 3.3523 0.0 0.0 131.09215812977374 266.1628817193969 397.25503984917066 0.0 0.0 0.0 0.0 0 1.0114393726401687 0.0 0.8807196863200843 0.3494850021680094 EETQ[NP]{M(Oxidation (M))|F} 3.3523 - 479 + 1 1.122 117717.0 1.0 7312 5442 12739 HBL1_DMSO_200M_050219_1,12756 HBL1_DMSO_200M_050219_1,12756,RIFPNQTEEL True True RIFPNQTEEL 64.879542 623.823413074017 3405802.0 12739.0 ENSG00000124733|ENST00000244711|MEA1 7.323599974314372 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12757 64.891 649.0 758030.0 25 0 37751.0 + 3015 AVIVSFQL 8 240 438.76231788561387 0 438.7763549685478 PEAK CID FTMS 0 0 0 12739 28312.47265625 0.2238782923777954 2 -0.1952438354492187 18 Unmodified _AVIVSFQL_ REV__ENSG00000164818|ENST00000297440|DNAAF5;REV__nc|ENSG00000164818|Q86Y56-2|DNAAF5 30.22481116460888 0.2280668331718824 3 E{I|L}[RK]T 5 -1 14.468 0.0 0.0 1.6525 0.0 0.0 113.05834587380828 132.04602991275627 245.10437578656456 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1747425010840047 1.305462187404089 E{I|L}[RK]T 1.6525 - 816 + 1 1.122 385933.0 1.0 7313 5442 12739 HBL1_DMSO_200M_050219_1,12757 HBL1_DMSO_200M_050219_1,12757,AVIVSFQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12758 64.9 546.0 381050.0 25 0 19899.0 34308 SLRNMTLLAT 10 215 560.3147839814543 1118.6150150297085 2 560.3150512576103 MULTI CID FTMS 0 0 0 12739 236853.828125 0.616695680262713 5 -0.4293594360351562 19 Unmodified _SLRNMTLLAT_ ENSG00000155974|ENST00000359742|GRIP1;nc|ENSG00000155974|Q9Y3R0-3|GRIP1 15.248480904072842 0.5916873121453583 3 QSYPP 5 10 20.468 0.0 0.0 1.8298 0.0 0.0 528.3417701210046 0.0 528.3417701210046 0.0 -4.447750586758907 -4.447750586758907 0.0 0 -0.0245166475519996 0.0 0.0 0.0 QSYPP 1.8298 - 2140 1 1.122 157421.8 1.0 7314 5442 12739 HBL1_DMSO_200M_050219_1,12758 HBL1_DMSO_200M_050219_1,12758,SLRNMTLLAT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12759 64.911 555.0 424770.0 25 0 28155.0 + 11779 GLLEKDFQKV 10 183 588.8350118291356 1175.6554707250712 2 588.8371459841728 MULTI CID FTMS 0 0 0 12739 226910.375 0.8938741618927973 -1 0.0706787109375 20 Unmodified _GLLEKDFQKV_ ENSG00000176974|ENST00000316694|SHMT1;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1;nc|ENSG00000176974|P34896-4|SHMT1 107.09958533191995 0.0045178149581522 3 VA{I|L}EKD{M(Oxidation (M))|F}QVK 10 4 + 101.27 0.0 0.0 8.614 8.614 88.341 0.0 0.0 0.0 33.52182518111363 3.881801713828821 3.881801713828821 3.881801713828821 0 2.309894379144197 1.6989700043360187 0.3054621874040891 1.2544321917401078 VA{I|L}EKD{M(Oxidation (M))|F}QVK;VA{I|L}EKD{M(Oxidation (M))|F}QKV;VA{I|L}EV[SG]{M(Oxidation (M))|F}QVK;VA{I|L}EKDV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K;VA{I|L}EV[SG]{M(Oxidation (M))|F}QKV;VA{I|L}EKVD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K;VA{I|L}V{[SA]|[TG]}D{M(Oxidation (M))|F}QVK;VA{I|L}EVKD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K;VA{I|L}V[SG]E{M(Oxidation (M))|F}QVK;VA{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}QVK 8.614;8.2838;7.5286;7.4309;7.1984;6.8666;6.7529;6.5607;6.4945;6.4597 -;-;-;-;-;-;-;-;-;- 16222 + 1 1.122 173869.4 1.0 7315 5442 12739 HBL1_DMSO_200M_050219_1,12759 HBL1_DMSO_200M_050219_1,12759,GLLEKDFQKV True True GLLEKDFQKV 64.91135 588.837145984173 2375791.75 12739.0 ENSG00000176974|ENST00000316694|SHMT1;;nc|ENSG00000176974|P34896-3|SHMT1;;nc|ENSG00000176974|P34896-2|SHMT1;;nc|ENSG00000176974|P34896-4|SHMT1 6.3889241218566895 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12761 64.916 17.0 2222600.0 25 0 390410.0 38067 TPHDFIEHI 9 70 554.7744484126837 1107.5343438921673 2 554.7751342654228 MULTI CID FTMS 0 0 0 12760 1982777.875 0.2476447538331471 2 -0.1895980834960937 1 Unmodified _TPHDFIEHI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 21.74664581756881 0.2544899275067181 3 [TP]H 3 6 29.353 0.0 0.0 2.6503 0.0 0.0 0.0 769.3552950494749 769.3552950494749 13.489765575595312 0.0 0.0 0.0 0 0.7302046884880937 1.3979400086720375 0.0 0.0 + [TP]H 2.6503 + + 94 + 1 1.141 36434.8 1.0 7316 5443 12760 HBL1_DMSO_200M_050219_1,12761 HBL1_DMSO_200M_050219_1,12761,TPHDFIEHI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12762 64.917 21.0 3772400.0 25 0 624960.0 + 44594 YPFKPPKI 8 87 330.5321852651292 988.5747263955876 3 330.5321838259697 MULTI CID FTMS 0 0 0 12760 1927413.75 0.1101873050769379 -9 0.6901473999023438 2 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 51.269 0.0 0.0 5.1861 5.1861 86.151 0.0 0.0 0.0 24.638023205811912 5.569979284289381 5.569979284289381 10.573193899842437 0 0.2614393726401688 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 5.1861;4.1166 +;- + 140 + 1 1.141 71393.0 1.0 7317 5443 12760 HBL1_DMSO_200M_050219_1,12762 HBL1_DMSO_200M_050219_1,12762,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12763 64.918 8.8 6050800.0 25 0 527640.0 + 39544 VAWVGQQV 8 75 443.74216605540033 885.4697791776007 2 443.7420532107353 MULTI CID FTMS 0 0 0 12760 4998365.5 0.5624358261851556 -1 0.1117706298828125 3 Unmodified _VAWVGQQV_ ENSG00000170540|ENST00000304414|ARL6IP1;nc|ENSG00000170540|Q15041-2|ARL6IP1 38.99230528602208 0.2511498934509823 3 {[VA]|[{I|L}G]}WVG 5 3 23.812 0.0 0.0 2.6892 0.0 0.0 0.0 370.1716584102757 370.1716584102757 6.249387366082999 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + {[VA]|[{I|L}G]}WVG 2.6892 + + 148 1 1.141 47236.5 1.0 7318 5443 12760 HBL1_DMSO_200M_050219_1,12763 HBL1_DMSO_200M_050219_1,12763,VAWVGQQV False True VAWVGQQV 64.917948 443.742053210735 53584536.0 12760.0 ENSG00000170540|ENST00000304414|ARL6IP1;;nc|ENSG00000170540|Q15041-2|ARL6IP1 6.097614129384358 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12764 64.919 24.0 2857700.0 25 0 288710.0 + 22670 LPYSRPIV 8 83 472.78297824020416 943.5514035472085 2 472.7838928103447 MULTI CID FTMS 0 0 0 12760 1603203.875 0.5725354443384097 -1 0.1117706298828125 4 Unmodified _LPYSRPIV_ ENSG00000204195|ENST00000374521|AWAT1 26.88365393820708 0.4786498634179528 3 {I|L}PYS 4 4 58.162 0.0 0.0 6.1641 0.0 0.0 0.0 480.2959334025932 480.2959334025932 32.21971276399756 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.7742275032520141 0.0 + {I|L}PYS 6.1641 + + 62 + 1 1.141 59464.9 1.0 7319 5443 12760 HBL1_DMSO_200M_050219_1,12764 HBL1_DMSO_200M_050219_1,12764,LPYSRPIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12765 64.92 27.0 2074100.0 25 0 174200.0 + 35727 SVHKGFAFV 9 84 496.2725375963049 990.5305222594098 2 496.2720519900322 MULTI CID FTMS 0 0 0 12760 1412773.25 0.3849360012707924 -2 0.1824493408203125 5 Unmodified _SVHKGFAFV_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 39.94969957227396 0.0757326808254658 3 [VS]H 3 6 33.161 0.0 0.0 3.3478 0.0 0.0 0.0 664.3480631131786 664.3480631131786 10.910065365128716 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.4247425010840047 0.0 + [VS]H 3.3478 + + 69 1 1.141 50147.5 1.0 7320 5443 12760 HBL1_DMSO_200M_050219_1,12765 HBL1_DMSO_200M_050219_1,12765,SVHKGFAFV True True SVHKGFAFV 64.920306 496.272051990032 36418124.0 12760.0 nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;ENSG00000179172|ENST00000317869|HNRNPCL1;;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;;ENSG00000277058|ENST00000617807|HNRNPCL3;;ENSG00000275774|ENST00000621994|HNRNPCL2;;nc|ENSG00000092199|P07910|HNRNPC;;ENSG00000179412|ENST00000323770|HNRNPCL4 7.120294570922852 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12766 64.921 35.0 1688400.0 25 0 224610.0 31279 RLWPSPGV 8 114 456.2565029054072 910.4984528776145 2 456.2568237185478 MULTI CID FTMS 0 0 0 12760 1287867.125 0.2254752231787233 -7 0.5759811401367188 6 Unmodified _RLWPSPGV_ ENST00000375820.8_1_13:110804785-110807666:-|nuORF 5.760428011301431 0.7893668129297577 3 V 1 7 12.218 0.0 0.0 1.342 0.0 0.0 793.4190517929449 0.0 793.4190517929449 0.0 2.5257498915995296 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.342 + + 24 + 1 1.141 49787.4 1.0 7321 5443 12760 HBL1_DMSO_200M_050219_1,12766 HBL1_DMSO_200M_050219_1,12766,RLWPSPGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12767 64.923 47.0 1140400.0 25 0 102370.0 + 18336 KVLETTVEI 9 85 516.3033561731299 1030.5921594130598 2 516.3033935427666 MULTI CID FTMS 0 0 0 12760 926182.625 0.3916018908612285 2 -0.1895980834960937 7 Unmodified _KVLETTVEI_ ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF 38.17557092003332 0.0854718145212029 3 [{I|L}A]V[VS]TTVE{I|L} 10 4 + 63.954 0.0 0.0 6.2056 6.2056 78.187 0.0 0.0 0.0 6.53212513775344 15.051499783199064 6.53212513775344 1.0784094103974695 0 0.7134679910804405 1.2218487496163564 1.174742501084005 0.0 [{I|L}A]V[VS]TTVE{I|L};[{I|L}A]VTMRVE{I|L};[{I|L}A]VT[VS]TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]TTVE{I|L};{[TV]|[{I|L}S]}{I|L}[VG]TTVE{I|L};{[TV]|[{I|L}S]}{I|L}AMRVE{I|L};{[TV]|[{I|L}S]}{I|L}A[VS]TVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}TTVE{I|L};{[TV]|[{I|L}S]}{I|L}R[PS]V{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PS]{I|L}KV{M(Oxidation (M))|F}{I|L} 6.2056;6.1009;5.89;5.5717;5.4505;5.3459;5.1349;4.0444;3.591;3.3251 -;-;-;-;-;-;-;-;-;- 428 1 1.141 48868.8 1.0 7322 5443 12760 HBL1_DMSO_200M_050219_1,12767 HBL1_DMSO_200M_050219_1,12767,KVLETTVEI True True KVLETTVEI 64.922764 516.303393542767 16868460.0 12760.0 ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 1.3966952761014302 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12768 64.924 42.0 1290000.0 25 0 104030.0 + 34041 SLKVSISQL 9 102 487.7967844294264 973.5790159256528 2 487.7977783083916 MULTI CID FTMS 0 0 0 12760 889754.0625 0.6840420859824867 -1 0.1117706298828125 8 Unmodified _SLKVSISQL_ ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1 13.042465956692816 0.4836390050082244 3 [{I|L}V][KS]S{I|L}WAA 9 5 + 27.398 0.0 0.0 2.8142 2.8142 77.473 0.0 0.0 0.0 3.75833099041856 13.419008989464276 3.75833099041856 8.908555305749317 0 0.0 1.3979400086720375 0.3807196863200844 0.0 [{I|L}V][KS]S{I|L}WAA;{[QV]|[N{I|L}]|[RA]|[KV]}{[MG]|[TS]}V{I|L}WAA;{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}S{I|L}WAA 2.8142;1.8992;1.4091 -;-;- 108 1 1.141 47146.2 1.0 7323 5443 12760 HBL1_DMSO_200M_050219_1,12768 HBL1_DMSO_200M_050219_1,12768,SLKVSISQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12769 64.925 54.0 728200.0 25 0 49024.0 + -1 LMAESKETV 9 85 512.2549623075304 1022.4953716818608 2 512.7559081912041 MULTI CID FTMS 0 0 0 12760 520733.6875 0.429357413418798 -3 0.2332229614257812 9 Oxidation (M) _LM(Oxidation (M))AESKETV_ REV__ENSG00000164309|ENST00000446378|CMYA5 19.438996006549623 0.310492472477042 3 {[TV]|[{I|L}S]}PT{M(Oxidation (M))|F}{I|L} 6 -1 20.425 0.0 0.0 1.9976 0.0 0.0 0.0 361.1396947621921 361.1396947621921 -2.516298960226557 0.0 -2.516298960226557 0.0 0 0.0 1.0969100130080565 0.5 0.0 {[TV]|[{I|L}S]}PT{M(Oxidation (M))|F}{I|L} 1.9976 - 292 1 1.141 36895.6 1.0 7324 5443 12760 HBL1_DMSO_200M_050219_1,12769 HBL1_DMSO_200M_050219_1,12769,LMAESKETV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12770 64.927 66.0 1025300.0 25 0 80359.0 + 251 ADAPIVAHL 9 88 453.75559121006125 905.4966294869224 2 453.7558776736259 MULTI CID FTMS 0 0 0 12760 504805.9375 0.096995394982584 -3 0.2332229614257812 10 Unmodified _ADAPIVAHL_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 32.116972079565 0.1225432171549407 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L}VAH{I|L} 8 2 + 38.488 0.0 0.0 4.2505 4.2505 85.813 0.0 0.0 0.0 13.59376682064596 8.765197072195043 8.765197072195043 38.48831671857983 0 0.3252574989159953 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L}VAH{I|L} 4.2505 - 179 + 1 1.141 59154.6 1.0 7325 5443 12760 HBL1_DMSO_200M_050219_1,12770 HBL1_DMSO_200M_050219_1,12770,ADAPIVAHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12771 64.931 193.0 664600.0 25 0 66834.0 -1 GEAICMAI 8 147 412.1881513016883 822.3617496701767 2 412.1884948611259 MULTI CID FTMS 0 0 0 12760 410956.0 0.8167332476143613 -1 0.1117706298828125 11 Oxidation (M) _GEAICM(Oxidation (M))AI_ ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1 14.581692164780916 0.6954967302934248 3 V 1 -1 13.099 0.0 0.0 1.5928 0.0 0.0 705.2821959976166 0.0 705.2821959976166 0.0 0.0571649344201183 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.5928 - 93 + 1 1.141 101617.9 1.0 7326 5443 12760 HBL1_DMSO_200M_050219_1,12771 HBL1_DMSO_200M_050219_1,12771,GEAICMAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12772 64.934 168.0 795820.0 25 0 103710.0 + 41671 VPQSRLLLV 9 124 342.22192393170394 1023.6439423953118 3 342.2218505740166 MULTI CID FTMS 0 0 0 12760 386518.84375 0.580000315120642 3 -0.2939529418945312 12 Unmodified _VPQSRLLLV_ REV__ENSG00000169896|ENST00000544665|ITGAM;REV__nc|ENSG00000169896|P11215-2|ITGAM 12.174745833636583 0.5071271664557081 3 VPDAK{I|L}R{I|L}{I|L} 9 -1 + 54.571 0.0 0.0 5.3311 5.3311 87.692 0.0 0.0 0.0 26.639218539437977 6.875183858039335 6.875183858039335 14.625310619734035 0 0.1549471895720985 0.0 0.0 0.3494850021680094 VPDAK{I|L}R{I|L}{I|L};VPWK{I|L}G{I|L}V{I|L};VPWK{I|L}G{I|L}{I|L}V;VPD{I|L}[KA]R{I|L}{I|L};VP{I|L}[NS]{I|L}R{I|L}{I|L};VP{I|L}KWG{I|L}V{I|L};VP{I|L}K{[DA]|[EG]}R{I|L}{I|L};VP{I|L}D[KA]R{I|L}{I|L};VP{I|L}KWG{I|L}{I|L}V;V{I|L}P[NS]{I|L}R{I|L}{I|L} 5.3311;3.9023;3.554;3.4993;3.3273;3.1421;3.0332;3.0332;2.7938;2.6918 -;-;-;-;-;-;-;-;-;- 286 + 1 1.141 117267.6 1.0 7327 5443 12760 HBL1_DMSO_200M_050219_1,12772 HBL1_DMSO_200M_050219_1,12772,VPQSRLLLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12773 64.943 542.0 362490.0 25 0 85114.0 11952 GNMCCGGR 8 181 399.14664357446406 796.2787342157282 2 399.1470519900322 MULTI CID FTMS 0 0 0 12760 375443.4375 1.0 0 0.0 13 Unmodified _GNMCCGGR_ ENST00000428881.1_1_1:171653255-171653381:-|nuORF 0.0 0.8243325171867699 3 {I|L} 1 8 9.0344 0.0 0.0 1.1346 0.0 0.0 665.1834868786173 0.0 665.1834868786173 0.0 0.2120192427654323 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1346 - 30 + 1 1.141 154298.9 1.0 7328 5443 12760 HBL1_DMSO_200M_050219_1,12773 HBL1_DMSO_200M_050219_1,12773,GNMCCGGR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12774 64.946 106.0 627460.0 25 0 61132.0 + 12387 GTIDVKELKV 10 101 367.8891304802546 1100.6455620409638 3 367.8889953494072 MULTI CID FTMS 0 0 0 12760 388391.8125 1.0 0 0.0 14 Unmodified _GTIDVKELKV_ ENSG00000147400|ENST00000370277|CETN2 28.49450938151212 0.328477364964909 3 VDKE{I|L}KV 7 4 33.708 0.0 0.0 3.0626 0.0 0.0 271.15423831014795 0.0 271.15423831014795 0.0 13.773303508619648 0.0 0.0 0 0.3252574989159953 0.0 0.8252574989159953 0.0 VDKE{I|L}KV 3.0626 - 425 + 1 1.141 63192.5 1.0 7329 5443 12760 HBL1_DMSO_200M_050219_1,12774 HBL1_DMSO_200M_050219_1,12774,GTIDVKELKV False True GTIDVKELKV 64.945683 367.888995349407 2407039.5 12760.0 ENSG00000147400|ENST00000370277|CETN2 4.869731267293294 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12775 64.95 202.0 458540.0 25 0 31039.0 + 22439 LPTNCCSICV 10 142 526.7337738640432 1051.4529947948863 2 526.7342407107353 MULTI CID FTMS 0 0 0 12760 395176.34375 0.2996885625131588 -3 0.2332229614257812 15 Unmodified _LPTNCCSICV_ REV__ENSG00000150551|ENST00000397463|LYPD1;REV__nc|ENSG00000150551|Q8N2G4-2|LYPD1;REV__nc|ENSG00000150551|Q8N2G4-3|LYPD1;REV__nc|ENSG00000150551|Q8N2G4-4|LYPD1 10.823927491677226 0.6659270209832991 3 TGV 3 -1 16.655 0.0 0.0 1.584 0.0 0.0 776.3052434081638 0.0 776.3052434081638 0.0 5.546218740408907 0.0 0.0 0 0.0 0.0 0.0 0.0 TGV 1.584 - 335 + 1 1.141 76156.6 1.0 7330 5443 12760 HBL1_DMSO_200M_050219_1,12775 HBL1_DMSO_200M_050219_1,12775,LPTNCCSICV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12776 64.954 239.0 407750.0 25 0 50993.0 + 1537 ALKPDLVNV 9 121 484.7923688389206 967.5701847446412 2 484.7925598025322 MULTI CID FTMS 0 0 0 12760 364964.75 0.5994980566789815 1 -0.0834732055664062 16 Unmodified _ALKPDLVNV_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 45.69961567697781 0.0497987121815769 3 [{I|L}A]KDP{I|L}VNV 9 2 + 45.93 0.0 0.0 4.747 4.747 76.871 0.0 0.0 0.0 3.0777269414698054 3.1677903326085755 3.0777269414698054 3.0777269414698054 0 1.5172203223519531 1.5228787452803376 0.0 0.0 [{I|L}A]KDP{I|L}VNV;[{I|L}P]DKA{I|L}VNV;[{I|L}A]KVEPVNV;[{I|L}A]K{I|L}DPVNV;[{I|L}P]DAK{I|L}VNV;[DP]{I|L}KA{I|L}VNV;[{I|L}A][DP]K{I|L}VNV;[EP]VKA{I|L}VNV;[{I|L}P]DVK[{I|L}A]NV;[VP]EKA{I|L}VNV 4.747;4.4289;4.0978;3.8466;3.8067;3.7203;3.6133;3.3563;3.2451;3.1913 -;-;-;-;-;-;-;-;-;- 2290 1 1.141 77503.3 1.0 7331 5443 12760 HBL1_DMSO_200M_050219_1,12776 HBL1_DMSO_200M_050219_1,12776,ALKPDLVNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12777 64.962 461.0 484090.0 25 0 53557.0 + 17952 KQYGNEVFLA 10 181 584.802877636766 1167.5912023403318 2 584.8041869997978 MULTI CID FTMS 0 0 0 12760 347642.46875 0.5202682567380801 -1 0.1117706298828125 17 Unmodified _KQYGNEVFLA_ ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 81.89019881105858 0.0155187237978306 3 [AG]KY[NG]EV{M(Oxidation (M))|F}[{I|L}A] 11 3 + 44.978 0.0 0.0 3.8522 3.8522 71.591 0.0 0.0 0.0 1.718558926962146 7.163320116228718 1.718558926962146 1.718558926962146 0 0.7742275032520141 1.0457574905606752 0.8737125054200235 1.6936726795685342 [AG]KY[NG]EV{M(Oxidation (M))|F}[{I|L}A];[KQ]Y[NG]EV{M(Oxidation (M))|F}[{I|L}A];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DN]TEV{M(Oxidation (M))|F}[{I|L}A];[AG]DGY[KQ]V{M(Oxidation (M))|F}[{I|L}A];{[DA]|[EG]}NY[KQ]V{M(Oxidation (M))|F}[{I|L}A];[{I|L}A]E{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{M(Oxidation (M))|F}[{I|L}A];[VS]HH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{M(Oxidation (M))|F}[{I|L}A];{[QD]|[EN]|[WG]|[KD]|[RS]}GY[KQ]V{M(Oxidation (M))|F}[{I|L}A];[Q{I|L}][WY]EV{M(Oxidation (M))|F}[{I|L}A];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CP]|[EA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{M(Oxidation (M))|F}[{I|L}A] 3.8522;3.705;3.7012;3.6444;3.6226;3.6103;3.5744;3.4972;3.3558;3.2774 -;+;-;-;-;-;-;-;-;- + 3827 1 1.141 166989.9 1.0 7332 5443 12760 HBL1_DMSO_200M_050219_1,12777 HBL1_DMSO_200M_050219_1,12777,KQYGNEVFLA True True KQYGNEVFLA 64.962193 584.804186999798 13845257.0 12760.0 ENST00000484403.5_1_21:30439206-30445917:-|nuORF;;nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 5.979180494944255 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12778 64.972 555.0 596250.0 25 0 31700.0 + 33236 SFNKMSIEY 9 246 559.7635574656613 0 559.7631713747978 PEAK CID FTMS 0 0 0 12760 216349.671875 0.7887999062079577 -1 0.1117706298828125 18 Unmodified _SFNKMSIEY_ ENSG00000186416|ENST00000688521|NKRF;nc|ENSG00000186416|O15226-2|NKRF;nc|ENSG00000186416|O15226|NKRF 74.19965305603844 0.0183649874100916 3 PYSQQ 5 8 29.24 0.0 0.0 2.6165 0.0 0.0 113.96707400402028 397.25730310611567 511.224377110136 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.5484550065040282 PYSQQ 2.6165 - 1188 + 1 1.141 244999.6 1.0 7333 5443 12760 HBL1_DMSO_200M_050219_1,12778 HBL1_DMSO_200M_050219_1,12778,SFNKMSIEY True True SFNKMSIEY 64.971939 559.763171374798 1911643.25 12760.0 nc|ENSG00000186416|O15226|NKRF;;nc|ENSG00000186416|O15226-2|NKRF;;ENSG00000186416|ENST00000688521|NKRF 5.154008626937866 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12779 64.982 601.0 124040.0 25 0 17883.0 -1 0 79 900.9413577456564 0 900.9410278201104 PEAK CID FTMS 0 0 0 12760 211733.578125 1.0 0 0.0 19 3 SVV{I|L} 4 -1 15.662 0.0 0.0 0.87017 0.0 0.0 1118.4999305500494 280.0941561334594 1398.5940866835087 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SVV{I|L} 0.87017 - 156 + 1 1.141 55120.6 1.0 7334 5443 12760 HBL1_DMSO_200M_050219_1,12779 HBL1_DMSO_200M_050219_1,12779, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12780 64.995 641.0 176410.0 25 0 13946.0 + -1 YYTAYQPYMQQ 11 120 736.3125615423459 1470.6105701514916 2 736.3109008669853 MULTI CID FTMS 0 0 0 12760 154800.3125 1.0 0 0.0 20 Oxidation (M) _YYTAYQPYM(Oxidation (M))QQ_ REV__ENSG00000153250|ENST00000348849|RBMS1;REV__ENST00000474820.5_1_2:161288949-161349874:-|nuORF;REV__nc|ENSG00000153250|P29558-2|RBMS1;REV__nc|ENSG00000153250|P29558-4|RBMS1 8.155526934196011 0.8366696279279818 3 YYYEE 5 -1 63.003 0.0 0.0 4.2841 0.0 0.0 0.0 720.316172997606 720.316172997606 42.79622535138721 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 YYYEE 4.2841 - 121 + 1 1.141 83454.6 1.0 7335 5443 12760 HBL1_DMSO_200M_050219_1,12780 HBL1_DMSO_200M_050219_1,12780,YYTAYQPYMQQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12782 64.999 2.8 14748000.0 25 0 2834600.0 + 39119 TYGERVVAF 9 62 521.2717946458087 1040.5290363584172 2 521.2726318240166 MULTI CID FTMS 0 0 0 12781 16246922.0 0.101904043575876 3 -0.2341156005859375 1 Unmodified _TYGERVVAF_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;ENST00000462343.1_1_2:10266966-10267371:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 28.49450938151212 0.1686335738423394 3 TYV 3 6 48.5 0.0 0.0 4.6611 0.0 0.0 0.0 674.3286837213499 674.3286837213499 5.937040524562249 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 TYV 4.6611 - 47 + 1 1.149 37073.9 1.0 7336 5444 12781 HBL1_DMSO_200M_050219_1,12782 HBL1_DMSO_200M_050219_1,12782,TYGERVVAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12783 65.0 15.0 3269500.0 25 0 322530.0 19686 LGLRPLHQL 9 66 349.55396087683255 1045.6400532306975 3 349.5538818240166 MULTI CID FTMS 0 0 0 12781 3397938.75 0.1315353702199018 4 -0.384796142578125 2 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 30.22481116460888 0.1466181017706357 3 {[VA]|[{I|L}G]}{I|L}E 4 6 37.307 0.0 0.0 3.5679 0.0 0.0 0.0 630.3847712110867 630.3847712110867 8.33558297341991 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}E 3.5679 - 87 + 1 1.149 48537.5 1.0 7337 5444 12781 HBL1_DMSO_200M_050219_1,12783 HBL1_DMSO_200M_050219_1,12783,LGLRPLHQL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12784 65.001 13.0 2942600.0 25 0 253730.0 + 41398 VPLDGRPMNI 10 53 556.2996133434849 1110.5846737537695 2 556.3000976443291 MULTI CID FTMS 0 0 0 12781 3412309.25 0.2958654598322737 -5 0.4152984619140625 3 Unmodified _VPLDGRPMNI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 24.99096001346401 0.4071966087057876 3 VP{I|L}D 4 6 50.974 0.0 0.0 4.5899 0.0 0.0 0.0 683.3320424920522 683.3320424920522 23.04235956215813 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + VP{I|L}D 4.5899 + + 33 + 1 1.149 38578.6 1.0 7338 5444 12781 HBL1_DMSO_200M_050219_1,12784 HBL1_DMSO_200M_050219_1,12784,VPLDGRPMNI False True VPLDGRPMNI 65.001424 556.300097644329 593873408.0 12781.0 nc|ENSG00000183684|Q86V81|ALYREF;;ENSG00000183684|ENST00000505490|ALYREF 7.064343293507894 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12785 65.003 26.0 1702300.0 25 0 205330.0 19024 LDLHLLHP 8 73 479.2774038569007 956.5402547806012 2 479.2777282595634 MULTI CID FTMS 0 0 0 12781 1730651.125 0.6583356878365272 -6 0.4921417236328125 4 Unmodified _LDLHLLHP_ ENST00000509578.1_1_5:85915227-85915260:+|nuORF 2.889219685676258 0.8067950007271085 3 Y 1 8 3.9794 0.0 0.0 0.41602 0.0 0.0 595.3842401395008 195.06638513736564 790.4506252768664 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.41602 - 12 + 1 1.149 37740.2 1.0 7339 5444 12781 HBL1_DMSO_200M_050219_1,12785 HBL1_DMSO_200M_050219_1,12785,LDLHLLHP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12786 65.004 22.0 1511400.0 25 0 236240.0 + 12379 GTIDEIQKL 9 72 508.78500561562765 1015.5554582980552 2 508.7852966189384 MULTI CID FTMS 0 0 0 12781 1351420.125 0.0335312923383949 4 -0.384796142578125 5 Unmodified _GTIDEIQKL_ ENSG00000167986|ENST00000301764|DDB1 27.628801355627647 0.1796483985696185 3 {[SA]|[TG]}{I|L}D{[QN]|[E{I|L}]|[KN]}QK{I|L} 9 0 + 48.204 0.0 0.0 4.7466 4.7466 83.5 0.0 0.0 0.0 30.043648054024487 11.27121139309525 11.27121139309525 9.208187539523747 0 0.3494850021680094 1.3010299956639813 0.0 0.5 + + {[SA]|[TG]}{I|L}D{[QN]|[E{I|L}]|[KN]}QK{I|L};{[SA]|[TG]}{I|L}D{[QN]|[E{I|L}]|[KN]}[AG]K{I|L};{[SA]|[TG]}{I|L}D{[QN]|[E{I|L}]|[KN]}[KA]G{I|L};{[SA]|[TG]}{I|L}D{[QN]|[E{I|L}]|[KN]}[KA]AV;{[SA]|[TG]}{I|L}[W{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{I|L};{[SA]|[TG]}{I|L}[W{I|L}][WQ]{I|L};{[SA]|[TG]}{I|L}[W{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AV;{[SA]|[TG]}{I|L}WW[RV]V;[KQ]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RP];[Q{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RP] 4.7466;3.8399;3.247;3.1439;2.5813;2.5362;2.4782;1.601;0.74812;0.45436 +;-;-;-;-;-;-;-;-;- + 103 + 1 1.149 29407.9 1.0 7340 5444 12781 HBL1_DMSO_200M_050219_1,12786 HBL1_DMSO_200M_050219_1,12786,GTIDEIQKL False True GTIDEIQKL 65.003783 508.785296618938 464021216.0 12781.0 ENSG00000167986|ENST00000301764|DDB1 5.401817798614502 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12787 65.005 70.0 1466100.0 25 0 187740.0 + 40430 VIIEKTYSL 9 125 533.3130138605907 1064.6114747879813 2 533.3146240115166 MULTI CID FTMS 0 0 0 12781 641073.0 0.7109311867726408 -1 0.0834732055664062 6 Unmodified _VIIEKTYSL_ ENSG00000166889|ENST00000300146|PATL1;nc|ENSG00000166889|Q86TB9-2|PATL1;nc|ENSG00000166889|Q86TB9-4|PATL1 37.97399986684836 0.0865783450051559 3 [{I|L}V]{[SA]|[TG]}TYS{I|L}V{I|L} 10 5 + 58.932 0.0 0.0 5.5355 5.5355 80.499 0.0 0.0 0.0 2.443868066579711 27.908620837984444 2.443868066579711 3.807196863200844 0 0.718765315847925 2.0 1.110924374808178 0.0 [{I|L}V]{[SA]|[TG]}TYS{I|L}V{I|L};[{I|L}V]{[SA]|[TG]}YTS{I|L}V{I|L};[{I|L}V]{I|L}[HM][RP]S{I|L};{[TV]|[{I|L}S]}G{I|L}TYS{I|L}V{I|L};[{I|L}V]{I|L}[HM][RP]TV;{[TV]|[{I|L}S]}GT{I|L}YS{I|L}V{I|L};{[TV]|[{I|L}S]}G{I|L}YTS{I|L}V{I|L};[{I|L}V]{I|L}[HM]T[VG]PV;{[QN]|[E{I|L}]|[KN]}KTYS{I|L}V{I|L};[{I|L}V]{I|L}[HM]{I|L}[PG]SV 5.5355;5.1779;5.0897;4.9112;4.8979;4.6285;4.5536;4.4984;4.3269;4.2948 -;-;-;-;-;-;-;-;-;- 1641 1 1.149 86370.5 1.0 7341 5444 12781 HBL1_DMSO_200M_050219_1,12787 HBL1_DMSO_200M_050219_1,12787,VIIEKTYSL True True VIIEKTYSL 65.005453 533.314624011517 8331563.5 12781.0 ENSG00000166889|ENST00000300146|PATL1;;nc|ENSG00000166889|Q86TB9-2|PATL1;;nc|ENSG00000166889|Q86TB9-4|PATL1 1.2460056742032368 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12788 65.007 40.0 1640000.0 25 0 161580.0 -1 SLYSMCHIS 9 103 528.7275538496189 1055.4405547660376 2 528.7264282107353 MULTI CID FTMS 0 0 0 12781 504257.34375 0.004634377129209 -6 0.4921417236328125 7 Oxidation (M) _SLYSM(Oxidation (M))CHIS_ ENSG00000015520|ENST00000381160|NPC1L1;nc|ENSG00000015520|Q9UHC9-2|NPC1L1;nc|ENSG00000015520|Q9UHC9|NPC1L1 21.74664581756881 0.2544899275067181 3 P{I|L}E{[CP]|[EA]}HS{I|L} 8 -1 40.909 0.0 0.0 3.876 0.0 0.0 160.9912882638876 0.0 160.9912882638876 0.0 26.76477176880759 0.0 0.0 0 0.4247425010840047 0.0 0.6307196863200843 0.0 P{I|L}E{[CP]|[EA]}HS{I|L} 3.876 - 277 + 1 1.149 60062.7 1.0 7342 5444 12781 HBL1_DMSO_200M_050219_1,12788 HBL1_DMSO_200M_050219_1,12788,SLYSMCHIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12789 65.017 581.0 560130.0 25 0 47412.0 + 25089 MPWYQRRI 8 195 383.8708287399912 1148.5906568201735 3 383.8709899783134 MULTI CID FTMS 0 0 0 12781 342082.15625 0.3459467927366851 -5 0.4152984619140625 8 Unmodified _MPWYQRRI_ ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1;nc|ENSG00000176623|Q96DB5-3|RMDN1 24.67388899826682 0.525179942228231 3 M{I|L}PW 4 6 40.177 0.0 0.0 3.498 0.0 0.0 0.0 618.3127330620911 618.3127330620911 25.79426299614425 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 M{I|L}PW 3.498 - 610 + 1 1.149 262658.5 1.0 7343 5444 12781 HBL1_DMSO_200M_050219_1,12789 HBL1_DMSO_200M_050219_1,12789,MPWYQRRI False True MPWYQRRI 65.016799 383.870989978313 11417348.0 12781.0 ENSG00000176623|ENST00000406452|RMDN1;;nc|ENSG00000176623|Q96DB5-2|RMDN1;;nc|ENSG00000176623|Q96DB5-3|RMDN1 4.60784896214803 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12790 65.026 504.0 214800.0 25 0 10829.0 + 45820 YYPAQGVQQF 10 144 600.7877975766753 1199.5610422201505 2 600.7882568240166 MULTI CID FTMS 0 0 0 12781 297851.25 0.168091727414603 3 -0.2341156005859375 9 Unmodified _YYPAQGVQQF_ ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 34.10243960390752 0.2198439752719791 3 YYHH{M(Oxidation (M))|F}R 6 8 34.835 0.0 0.0 2.904 0.0 0.0 0.0 293.12607752017817 293.12607752017817 20.85599001571901 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.0 0.6203715150305281 YYHH{M(Oxidation (M))|F}R 2.904 - 2394 + 1 1.149 84026.0 1.0 7344 5444 12781 HBL1_DMSO_200M_050219_1,12790 HBL1_DMSO_200M_050219_1,12790,YYPAQGVQQF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12791 65.037 629.0 611340.0 25 0 60081.0 984 AFRPCLPA 8 212 437.7322632586759 873.4499735841517 2 437.7325317263603 MULTI CID FTMS 0 0 0 12781 262639.875 0.9959711905222662 -2 0.1952438354492187 10 Unmodified _AFRPCLPA_ nc|ENSG00000179148|Q9BYJ1-2|ALOXE3 19.438996006549623 0.6237395211498085 3 [VS]HKHA 6 7 50.765 0.0 0.0 5.812 0.0 0.0 0.0 211.07157888801729 211.07157888801729 35.843479507194466 0.0 0.0 0.0 0 0.5283773187068795 1.6989700043360187 0.3807196863200844 0.7059771852360797 [VS]HKHA 5.812 - 2137 1 1.149 292185.7 1.0 7345 5444 12781 HBL1_DMSO_200M_050219_1,12791 HBL1_DMSO_200M_050219_1,12791,AFRPCLPA False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12792 65.041 250.0 380180.0 25 0 38020.0 + 21985 LPPPENIEV 9 139 504.27381369431583 1006.5330744554316 2 504.2738830447197 MULTI CID FTMS 0 0 0 12781 216194.671875 0.1791564126027461 -8 0.659454345703125 11 Unmodified _LPPPENIEV_ ENSG00000142166|ENST00000270139|IFNAR1;nc|ENSG00000142166|P17181-2|IFNAR1;nc|ENSG00000142166|P17181-3|IFNAR1;nc|ENSG00000142166|P17181-4|IFNAR1 24.020572477871973 0.2255576514309169 3 N{I|L}EV 4 5 31.208 0.0 0.0 3.1005 0.0 0.0 533.285448142775 0.0 533.285448142775 0.0 14.59094478065159 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + N{I|L}EV 3.1005 + + 549 1 1.149 74156.2 1.0 7346 5444 12781 HBL1_DMSO_200M_050219_1,12792 HBL1_DMSO_200M_050219_1,12792,LPPPENIEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12793 65.052 612.0 161780.0 25 0 37326.0 + -1 YCIVEMTWKVE 11 100 708.8328721585949 1415.6511913839895 2 708.8351928591728 MULTI CID FTMS 0 0 0 12781 186554.5 1.0 0 0.0 12 Oxidation (M) _YCIVEM(Oxidation (M))TWKVE_ REV__ENSG00000170471|ENST00000262879|RALGAPB;REV__nc|ENSG00000170471|Q86X10-3|RALGAPB;REV__nc|ENSG00000170471|Q86X10-4|RALGAPB 4.897010918128616 0.8520435188433833 3 V 1 -1 11.99 0.0 0.0 0.84694 0.0 0.0 1298.5714774941443 0.0 1298.5714774941443 0.0 -2.703037561203842 -2.703037561203842 0.0 0 0.0 0.0 0.0 0.0 V 0.84694 + + 80 + 1 1.149 75142.4 1.0 7347 5444 12781 HBL1_DMSO_200M_050219_1,12793 HBL1_DMSO_200M_050219_1,12793,YCIVEMTWKVE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12794 65.062 599.0 348270.0 25 0 40765.0 13816 HTLLEYLLGE 10 164 594.3169799406237 1186.6194069480473 2 594.3160278201103 MULTI CID FTMS 0 0 0 12781 177464.71875 0.7881089846673307 1 -0.1061248779296875 13 Unmodified _HTLLEYLLGE_ ENSG00000104951|ENST00000391826|IL4I1;nc|ENSG00000104951|Q96RQ9-2|IL4I1 32.78568957990786 0.2337485590374503 3 {[YC]|[HE]}T{I|L}{I|L}Y{I|L}{I|L}W 9 4 + 79.11 0.0 0.0 6.6668 6.6668 91.434 0.0 0.0 0.0 12.205816425582556 9.208187539523747 9.208187539523747 12.205816425582556 0 0.7742275032520141 0.958607314841775 2.0969365234758905 0.0 {[YC]|[HE]}T{I|L}{I|L}Y{I|L}{I|L}W;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}AT{I|L}{I|L}W;{NN|[MP]|[D{I|L}]|[EV]}A{[RE]|[WV]}AT{I|L}{I|L}W;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[WQ]T{I|L}{I|L}W;[HT]E{I|L}{I|L}Y{I|L}{I|L}W;{I|L}{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]}AT{I|L}{I|L}W;{[DA]|[EG]}{I|L}{[RE]|[WV]}AT{I|L}{I|L}W;{[YC]|[HE]}{I|L}{I|L}YT{I|L}{I|L}W;{[YC]|[HE]}{I|L}{I|L}TY{I|L}{I|L}W;{I|L}{I|L}D[WQ]T{I|L}{I|L}W 6.6668;5.6382;5.3028;5.0877;5.0165;4.9675;4.9101;4.5509;4.5406;4.417 -;-;-;-;-;-;-;-;-;- 2257 1 1.149 153991.5 1.0 7348 5444 12781 HBL1_DMSO_200M_050219_1,12794 HBL1_DMSO_200M_050219_1,12794,HTLLEYLLGE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12795 65.075 646.0 293060.0 25 0 30093.0 + -1 PMLWHRKCPLS 11 114 712.8710262163033 1423.7274994994066 2 712.8718749880791 MULTI CID FTMS 0 0 0 12781 149584.859375 1.0 0 0.0 14 Carbamidomethyl (C) _PMLWHRKC(Carbamidomethyl (C))PLS_ REV__ENST00000358965.10_1_11:71725379-71725490:-|nuORF 6.2057823575117 0.8458686499021061 3 MP{I|L}ST{I|L}{[RE]|[WV]}V 9 -1 41.731 0.0 0.0 2.9311 0.0 0.0 379.1636100465008 0.0 379.1636100465008 0.0 20.840544960585525 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 MP{I|L}ST{I|L}{[RE]|[WV]}V 2.9311 - 451 + 1 1.149 135750.0 1.0 7349 5444 12781 HBL1_DMSO_200M_050219_1,12795 HBL1_DMSO_200M_050219_1,12795,PMLWHRKCPLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12796 65.089 800.0 161450.0 25 0 18489.0 + -1 YMIDPSGVSY 10 71 1146.477006827109 3436.409191081528 3 1147.486010730267 MULTI CID FTMS 0 0 0 12781 130440.953125 0.5455236875693159 -2 0.1952438354492187 15 ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 3 [Y{M(Oxidation (M))|F}]{I|L}D[PS]GVSY 10 -1 19.87 0.0 0.0 0.57822 0.0 0.0 0.0 2304.909895601118 2304.909895601118 3.4062061868779345 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [Y{M(Oxidation (M))|F}]{I|L}D[PS]GVSY 0.57822 - 399 1 1.149 99537.1 0.8899999856948853 7350 5444 12781 HBL1_DMSO_200M_050219_1,12796 HBL1_DMSO_200M_050219_1,12796, False False YMIDPSGVSY 65.088793 1147.48601073027 71480904.0 12781.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 6.740933418273926 1.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12797 65.101 700.0 192230.0 25 0 11652.0 5532 DMGHMMRCTCV 11 164 642.2437813552611 1282.4730097773222 2 642.7460815310478 MULTI CID FTMS 0 0 0 12781 88680.78125 0.5233148143059809 -2 0.1952438354492187 16 Unmodified _DMGHMMRCTCV_ ENSG00000115414|ENST00000354785|FN1;nc|ENSG00000115414|P02751-1|FN1;nc|ENSG00000115414|P02751-10|FN1;nc|ENSG00000115414|P02751-11|FN1;nc|ENSG00000115414|P02751-12|FN1;nc|ENSG00000115414|P02751-13|FN1;nc|ENSG00000115414|P02751-14|FN1;nc|ENSG00000115414|P02751-16|FN1;nc|ENSG00000115414|P02751-17|FN1;nc|ENSG00000115414|P02751-2|FN1;nc|ENSG00000115414|P02751-3|FN1;nc|ENSG00000115414|P02751-4|FN1;nc|ENSG00000115414|P02751-5|FN1;nc|ENSG00000115414|P02751-6|FN1;nc|ENSG00000115414|P02751-7|FN1;nc|ENSG00000115414|P02751-8|FN1;nc|ENSG00000115414|P02751-9|FN1 2.9952420565917617 0.861016188266951 3 V 1 10 13.495 0.0 0.0 1.0523 0.0 0.0 1165.3935323987073 0.0 1165.3935323987073 0.0 1.6080246040879145 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.0523 + + 844 + 1 1.149 101462.5 1.0 7351 5444 12781 HBL1_DMSO_200M_050219_1,12797 HBL1_DMSO_200M_050219_1,12797,DMGHMMRCTCV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12799 65.105 2.8 11719000.0 25 0 1441000.0 + 26283 NQTPVTLQV 9 58 500.276835462788 998.539117992376 2 500.2772704958916 MULTI CID FTMS 0 0 0 12798 15192938.0 0.8516787046493113 -1 0.1061248779296875 1 Unmodified _NQTPVTLQV_ ENSG00000063244|ENST00000308924|U2AF2;nc|ENSG00000063244|P26368-2|U2AF2 36.12702656103203 0.0967173616627612 3 {[QN]|[E{I|L}]|[KN]}T[VP]T 6 3 30.775 0.0 0.0 3.082 0.0 0.0 0.0 355.1967415060057 355.1967415060057 18.010796349923375 0.0 0.0 0.0 0 0.0 1.0 0.5 0.7614393726401688 + {[QN]|[E{I|L}]|[KN]}T[VP]T 3.082 + + 53 1 1.149 34520.1 1.0 7352 5445 12798 HBL1_DMSO_200M_050219_1,12799 HBL1_DMSO_200M_050219_1,12799,NQTPVTLQV True True NQTPVTLQV 65.105192 500.277270495892 507671856.0 12798.0 nc|ENSG00000063244|P26368-2|U2AF2;;ENSG00000063244|ENST00000308924|U2AF2 6.3533932367960615 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12800 65.107 55.0 761640.0 25 0 95812.0 + 35776 SVIPQIQKV 9 73 506.3135985179971 1010.6126441027942 2 506.3136779665947 MULTI CID FTMS 0 0 0 12798 404147.25 0.0478636886402936 4 -0.3252716064453125 2 Unmodified _SVIPQIQKV_ ENSG00000151876|ENST00000281623|FBXO4;nc|ENSG00000151876|Q9UKT5-2|FBXO4 24.020572477871973 0.2255576514309169 3 [VS]{I|L}[QP]{I|L}QKV 9 0 + 44.429 0.0 0.0 4.3963 4.3963 82.389 0.0 0.0 0.0 22.210728925229297 7.734516461585876 7.734516461585876 9.208187539523747 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + + [VS]{I|L}[QP]{I|L}QKV;[VS]{I|L}[QP]{I|L}[AG]KV 4.3963;3.4851 +;- + 77 + 1 1.149 39507.5 1.0 7353 5445 12798 HBL1_DMSO_200M_050219_1,12800 HBL1_DMSO_200M_050219_1,12800,SVIPQIQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12801 65.108 21.0 2161100.0 25 0 320550.0 + 13533 HPDSHQLFI 9 68 547.2744675985609 1092.5343822639218 2 547.2747680544853 MULTI CID FTMS 0 0 0 12798 1806374.625 0.1607755128796666 -4 0.3720474243164062 3 Unmodified _HPDSHQLFI_ ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136268294-136268516:-|nuORF 26.88365393820708 0.1891292719743517 3 Q{I|L}{M(Oxidation (M))|F}{I|L} 4 5 21.596 0.0 0.0 1.9766 0.0 0.0 573.2305837989252 0.0 573.2305837989252 0.0 11.680699078770092 0.0 0.0 0 0.5397644799392252 0.0 0.0 0.0 + Q{I|L}{M(Oxidation (M))|F}{I|L} 1.9766 + + 27 1 1.149 42228.1 1.0 7354 5445 12798 HBL1_DMSO_200M_050219_1,12801 HBL1_DMSO_200M_050219_1,12801,HPDSHQLFI False True HPDSHQLFI 65.107771 547.274768054485 230288288.0 12798.0 ENSG00000145907|ENST00000356245|G3BP1;;ENST00000413279.1_1_2:136268294-136268516:-|nuORF 4.456391970316569 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12802 65.109 31.0 2016500.0 25 0 317240.0 + 26291 NQVEALNNL 9 115 507.7644048105509 1013.5142566879016 2 507.7642700076103 MULTI CID FTMS 0 0 0 12798 1022960.3125 0.5548418063215097 1 -0.1043548583984375 4 Unmodified _NQVEALNNL_ ENSG00000115760|ENST00000421745|BIRC6 68.08070601005525 0.0218408846571049 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}EA{I|L} 6 5 52.374 0.0 0.0 5.1676 0.0 0.0 0.0 356.1574811354205 356.1574811354205 29.181212380090223 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3054621874040891 1.7971062485323517 {NN|[MP]|[D{I|L}]|[EV]}{I|L}EA{I|L} 5.1676 - 399 1 1.149 52554.0 1.0 7355 5445 12798 HBL1_DMSO_200M_050219_1,12802 HBL1_DMSO_200M_050219_1,12802,NQVEALNNL True True NQVEALNNL 65.108951 507.76427000761 13258369.0 12798.0 ENSG00000115760|ENST00000421745|BIRC6 5.340264479319255 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12803 65.111 87.0 3508300.0 25 0 430720.0 13154 HFLGRLSV 8 154 464.7702133278089 927.5258737224176 2 464.7701293826103 MULTI CID FTMS 0 0 0 12798 475236.15625 0.2047473940261349 -7 0.5982666015625 5 Unmodified _HFLGRLSV_ ENST00000316024.9_2_17:7590934-7591339:+|nuORF 9.347437153973935 0.7675937258251505 3 V 1 7 11.783 0.0 0.0 1.2703 0.0 0.0 810.4463810850139 0.0 810.4463810850139 0.0 3.059099143085593 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2703 + + 68 + 1 1.149 234580.7 1.0 7356 5445 12798 HBL1_DMSO_200M_050219_1,12803 HBL1_DMSO_200M_050219_1,12803,HFLGRLSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12804 65.112 62.0 1688100.0 25 0 214250.0 + 37006 TFPNGVKGL 9 118 466.7632680151626 931.5119830971252 2 466.7639648318291 MULTI CID FTMS 0 0 0 -1 0 6 Unmodified _TFPNGVKGL_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 25.399314129420983 0.2080152500878129 3 [{M(Oxidation (M))|F}T]PNGVKG{I|L} 9 0 + 34.122 0.0 0.0 3.6631 3.6631 68.803 0.0 0.0 0.0 3.3642014324718588 0.3476210625921183 0.3476210625921183 0.3476210625921183 0 0.4247425010840047 0.0 0.0 0.4247425010840047 + + [{M(Oxidation (M))|F}T]PNGVKG{I|L};[{M(Oxidation (M))|F}T]PNGVKAV;[{M(Oxidation (M))|F}T]PGGGVKG{I|L};[{M(Oxidation (M))|F}T]PGGGVKAV;[{M(Oxidation (M))|F}T]PNG[KG]V{I|L};[{M(Oxidation (M))|F}T]PNG[KG]{I|L}V;[{M(Oxidation (M))|F}T]PGGG[KG]V{I|L};[{M(Oxidation (M))|F}T]PGGG[KG]{I|L}V 3.6631;3.6257;2.6745;2.6372;2.5022;2.4649;1.5137;1.4764 +;-;-;-;-;-;-;- + 289 + 1 1.149 84794.0 1.0 7357 5445 12798 HBL1_DMSO_200M_050219_1,12804 HBL1_DMSO_200M_050219_1,12804,TFPNGVKGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12805 65.114 82.0 927300.0 25 0 65792.0 + 9820 FPDPNVKYV 9 118 539.7821390043049 1077.5497250754097 2 539.7820922732353 MULTI CID FTMS 0 0 0 12798 421430.0 0.071881901019835 9 -0.6430740356445312 7 Unmodified _FPDPNVKYV_ ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF 28.49450938151212 0.1686335738423394 3 [DP]NVP{M(Oxidation (M))|F}KYV 9 4 + 48.925 0.0 0.0 4.5404 4.5404 72.456 0.0 0.0 0.0 20.86950683522093 19.85815309750656 19.85815309750656 0.9691001300805624 0 0.9204841662593096 1.3979400086720375 0.0 0.2887254899964357 [DP]NVP{M(Oxidation (M))|F}KYV;[DP]NPV{M(Oxidation (M))|F}KYV;[DP]NVPK{M(Oxidation (M))|F}YV;[DP]NPVK{M(Oxidation (M))|F}YV;[DP]{M(Oxidation (M))|F}[NP]VKYV;[DP]NP{M(Oxidation (M))|F}VKYV;[DP]GGVP{M(Oxidation (M))|F}KYV;[DP]GGPV{M(Oxidation (M))|F}KYV;[DP]{M(Oxidation (M))|F}[NP]KVYV;[DP]NP{M(Oxidation (M))|F}KVYV 4.5404;4.4504;3.8178;3.7278;3.4816;3.4603;3.4179;3.3279;2.759;2.7377 -;-;-;-;-;-;-;-;-;- 857 1 1.149 64301.4 1.0 7358 5445 12798 HBL1_DMSO_200M_050219_1,12805 HBL1_DMSO_200M_050219_1,12805,FPDPNVKYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12806 65.117 110.0 771170.0 25 0 90551.0 14507 IGPRPGDR 8 111 434.24326329186215 866.4719736505243 2 434.2432739138603 MULTI CID FTMS 0 0 0 12798 417916.59375 0.1647467223198602 -5 0.422821044921875 8 Unmodified _IGPRPGDR_ ENST00000599536.1_2_19:49967120-49989319:+|nuORF 5.230669730166228 0.792582437072536 3 {I|L} 1 7 9.8329 0.0 0.0 1.1348 0.0 0.0 735.3769857128275 0.0 735.3769857128275 0.0 0.7985042143375587 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1348 + + 21 + 1 1.149 68273.8 1.0 7359 5445 12798 HBL1_DMSO_200M_050219_1,12806 HBL1_DMSO_200M_050219_1,12806,IGPRPGDR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12807 65.12 154.0 640490.0 25 0 55612.0 + 5917 DPYSQQIRL 9 111 560.2920789911356 0 560.2929565310478 PEAK CID FTMS 0 0 0 12798 430694.15625 0.7609634856911591 -1 0.1061248779296875 9 Unmodified _DPYSQQIRL_ ENSG00000143493|ENST00000366994|INTS7;nc|ENSG00000143493|Q9NVH2-2|INTS7;nc|ENSG00000143493|Q9NVH2-3|INTS7;nc|ENSG00000143493|Q9NVH2-4|INTS7 89.40071534611396 0.0142222419377442 3 PYSQQ{I|L} 6 3 60.979 0.0 0.0 5.4515 0.0 0.0 115.02284036072486 284.17321894659307 399.1960593073179 0.0 0.0 0.0 0.0 0 1.7302046884880935 0.0 0.7742275032520141 0.805462187404089 + PYSQQ{I|L} 5.4515 + + 124 + 1 1.149 79602.6 1.0 7360 5445 12798 HBL1_DMSO_200M_050219_1,12807 HBL1_DMSO_200M_050219_1,12807,DPYSQQIRL True True DPYSQQIRL 65.119626 560.292956531048 93056112.0 12798.0 nc|ENSG00000143493|Q9NVH2-4|INTS7;;ENSG00000143493|ENST00000366994|INTS7;;nc|ENSG00000143493|Q9NVH2-3|INTS7;;nc|ENSG00000143493|Q9NVH2-2|INTS7 7.0815354983011884 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12808 65.122 98.0 344190.0 25 0 12948.0 + -1 EVCSLCSNHV 10 76 574.2492149468575 1146.4838769605149 2 574.2500488162041 MULTI CID FTMS 0 0 0 12798 384395.875 0.254295457909565 4 -0.3252716064453125 10 Carbamidomethyl (C) _EVC(Carbamidomethyl (C))SLCSNHV_ REV__ENSG00000221866|ENST00000321063|PLXNA4 10.073929032068715 0.6785112666868882 3 [H{I|L}]M{I|L}S 5 -1 29.239 0.0 0.0 2.5503 0.0 0.0 0.0 562.1634173260023 562.1634173260023 8.754471812167779 0.0 0.0 0.0 0 0.3252574989159953 1.3010299956639813 0.3054621874040891 0.0 [H{I|L}]M{I|L}S 2.5503 - 106 1 1.149 31568.2 1.0 7361 5445 12798 HBL1_DMSO_200M_050219_1,12808 HBL1_DMSO_200M_050219_1,12808,EVCSLCSNHV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12809 65.123 72.0 578480.0 25 0 38252.0 + 44522 YPDRNLPTI 9 86 544.7897074529764 1087.5648619727526 2 544.7894775271416 MULTI CID FTMS 0 0 0 12798 391448.53125 0.0539047498669761 9 -0.6430740356445312 11 Unmodified _YPDRNLPTI_ ENSG00000115539|ENST00000264254|PDCL3 23.78978130925829 0.2284941198415988 3 YPPW[KS]PT{I|L} 9 4 + 55.812 0.0 0.0 5.1318 5.1318 86.087 0.0 0.0 0.0 33.92790030352131 11.962724883926654 11.962724883926654 11.14848121939808 0 0.8494850021680094 0.0 0.3494850021680094 0.0 YPPW[KS]PT{I|L};YPPWVVQS{I|L};YPPWVVNT{I|L};YPPWVVQTV;YPPWVV[AG]S{I|L};YPPWVVGGT{I|L};YPPWVV[AG]TV;YPPW[KG]{NN|[MP]|[D{I|L}]|[EV]}{I|L};[TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}YPT{I|L};YPPW[KG]{[QN]|[E{I|L}]|[KN]}V 5.1318;4.1068;3.9812;3.4652;3.2601;3.1346;2.6185;2.581;2.5785;1.9394 -;-;-;-;-;-;-;-;-;- 258 + 1 1.149 44042.4 1.0 7362 5445 12798 HBL1_DMSO_200M_050219_1,12809 HBL1_DMSO_200M_050219_1,12809,YPDRNLPTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12810 65.126 144.0 657140.0 25 0 71311.0 7966 ELTGVRFKAQL 11 85 631.3663754572636 0 631.3657714724541 PEAK CID FTMS 0 0 0 12798 321660.15625 0.736482968403168 -2 0.1895980834960937 12 Unmodified _ELTGVRFKAQL_ ENSG00000142207|ENST00000382751|URB1 24.020572477871973 0.3025672323349825 3 ASV 3 10 9.64 0.0 0.0 0.76464 0.0 0.0 761.4525557467554 239.1042116754516 1000.5567674222068 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 ASV 0.76464 - 143 + 1 1.149 76915.5 1.0 7363 5445 12798 HBL1_DMSO_200M_050219_1,12810 HBL1_DMSO_200M_050219_1,12810,ELTGVRFKAQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12811 65.14 769.0 556210.0 25 0 80566.0 + 43852 YFIRDVKSL 9 260 380.885273962301 1139.6339924871031 3 380.8851196169853 MULTI CID FTMS 0 0 0 12798 233656.015625 0.4600486112572414 -1 0.1061248779296875 13 Unmodified _YFIRDVKSL_ ENSG00000113318|ENST00000265081|MSH3 60.899326713953855 0.0255841537240836 3 Y{M(Oxidation (M))|F}{I|L}RDVKS{I|L} 9 0 + 62.313 0.0 0.0 5.4678 5.4678 74.302 0.0 0.0 0.0 16.478174818886373 12.966651902615313 12.966651902615313 0.2557626122369072 0 1.0431576817365438 0.0 1.1861818737241734 0.2887254899964357 + + Y{M(Oxidation (M))|F}{I|L}RDVKS{I|L};Y{I|L}{M(Oxidation (M))|F}RDVKS{I|L};Y{M(Oxidation (M))|F}{I|L}RDVKTV;Y{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KS{I|L};Y{I|L}{M(Oxidation (M))|F}RDVKTV;Y{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KS{I|L};[R{I|L}]D{M(Oxidation (M))|F}VKS{I|L}Y;Y{I|L}[RD]{M(Oxidation (M))|F}VKS{I|L};[R{I|L}]{M(Oxidation (M))|F}DVKS{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDVKS{I|L}Y 5.4678;5.4454;4.33;4.3223;4.3076;4.2999;4.2106;4.0515;3.9464;3.6784 +;-;-;-;-;-;-;-;-;- + 2446 + 1 1.149 329579.6 1.0 7364 5445 12798 HBL1_DMSO_200M_050219_1,12811 HBL1_DMSO_200M_050219_1,12811,YFIRDVKSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12812 65.151 655.0 370370.0 25 0 28141.0 + 11714 GLGYNCIQ 8 150 867.3997174554784 866.3924409888783 1 867.4005004763603 MULTI CID FTMS 0 0 0 12798 189449.5 0.7536828914128857 -1 0.1061248779296875 14 Unmodified _GLGYNCIQ_ ENSG00000114480|ENST00000429644|GBE1 14.581692164780916 0.6954967302934248 3 M{I|L}Q 3 6 18.914 0.0 0.0 2.1831 0.0 0.0 476.2030749066348 0.0 476.2030749066348 0.0 5.956837818197801 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 M{I|L}Q 2.1831 - 379 + 1 1.149 164284.4 1.0 7365 5445 12798 HBL1_DMSO_200M_050219_1,12812 HBL1_DMSO_200M_050219_1,12812,GLGYNCIQ False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12813 65.156 238.0 507200.0 25 0 49007.0 23570 LTMKRNEMI 9 133 568.2991996791862 1134.5838464251724 2 568.2996093630791 MULTI CID FTMS 0 0 0 12798 187334.640625 0.0120515172148503 15 -1.2024154663085938 15 Unmodified _LTMKRNEMI_ ENSG00000188171|ENST00000601440|ZNF626;ENST00000595094.1_1_19:20736613-20844252:-|nuORF;nc|ENSG00000188171|Q68DY1-3|ZNF626 16.942295170755138 0.3780752226737986 3 T{I|L}V{[{M(Oxidation (M))|F}H]|[RQ]}D 6 7 30.032 0.0 0.0 2.647 0.0 0.0 334.171929341101 85.03023706607655 419.2021664071776 0.0 0.0 0.0 0.0 0 0.5 0.0 0.8807196863200843 0.6549471895720985 T{I|L}V{[{M(Oxidation (M))|F}H]|[RQ]}D 2.647 - 1394 + 1 1.149 93469.1 1.0 7366 5445 12798 HBL1_DMSO_200M_050219_1,12813 HBL1_DMSO_200M_050219_1,12813,LTMKRNEMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12814 65.166 618.0 435310.0 25 0 26699.0 + 18417 KVVENLQDDF 10 214 603.8037093463453 0 603.8022949099541 PEAK CID FTMS 0 0 0 12798 188661.828125 0.8277404122675263 -2 0.1895980834960937 16 Unmodified _KVVENLQDDF_ ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3 87.25819977447905 5.0846443350928256e-05 3 DDQ{I|L}NE 6 9 71.814 0.0 0.0 5.9567 0.0 0.0 165.08024081411082 323.2092744849503 488.2895152990611 0.0 0.0 0.0 0.0 0 1.1989700043360187 0.0 0.8633643341304673 2.1549471895720984 DDQ{I|L}NE 5.9567 - 1024 + 1 1.149 194491.4 1.0 7367 5445 12798 HBL1_DMSO_200M_050219_1,12814 HBL1_DMSO_200M_050219_1,12814,KVVENLQDDF True True KVVENLQDDF 65.166363 603.802294909954 5782387.5 12798.0 ENSG00000168610|ENST00000264657|STAT3;;nc|ENSG00000168610|P40763-2|STAT3;;nc|ENSG00000168610|P40763-3|STAT3 8.142650286356607 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12815 65.18 800.0 1014200.0 25 0 122210.0 -1 0 333 366.7365590087173 731.4585650842347 2 366.7358276247978 MULTI CID FTMS 0 0 0 12798 179504.046875 0.0023293206623265 9 -0.6430740356445312 17 3 V{I|L}PK{I|L}Y 6 -1 + 64.299 0.0 0.0 8.7906 8.7906 91.985 0.0 0.0 0.0 32.388115153472455 7.085153222422498 7.085153222422498 7.085153222422498 0 0.4456290139465234 2.0 0.0 0.0 V{I|L}PK{I|L}Y;V{I|L}PKY{I|L};V{I|L}Y[KP]{I|L} 8.7906;7.8219;5.3667 -;-;- 217 + 1 1.149 622466.2 0.9200000166893004 7368 5445 12798 HBL1_DMSO_200M_050219_1,12815 HBL1_DMSO_200M_050219_1,12815, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12816 65.192 597.0 384420.0 25 0 237400.0 -1 0 106 964.4450831006824 2890.313419902247 3 965.112841784954 MULTI CID FTMS 0 0 0 12798 182193.640625 0.162920802144692 5 -0.3861541748046875 18 3 [NP]{I|L}DYD 6 -1 22.712 0.0 0.0 0.7858 0.0 0.0 0.0 2169.998514466953 2169.998514466953 11.254471812167782 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.4247425010840047 [NP]{I|L}DYD 0.7858 - 1015 1 1.149 161586.2 1.0 7369 5445 12798 HBL1_DMSO_200M_050219_1,12816 HBL1_DMSO_200M_050219_1,12816, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12817 65.202 585.0 968010.0 25 0 85579.0 -1 KLFSMLQV 8 301 491.27457390652216 0 491.2710143923759 PEAK CID FTMS 0 0 0 12798 157268.46875 0.3350035836248017 -6 0.52142333984375 19 Oxidation (M) _KLFSM(Oxidation (M))LQV_ ENSG00000115760|ENST00000421745|BIRC6 34.10243960390752 0.1934076185521331 3 {I|L}TG{[QG]|[NA]}P 6 -1 24.242 0.0 0.0 2.4723 0.0 0.0 245.14177196661416 179.08306299381096 424.22483496042514 0.0 0.0 0.0 0.0 0 0.2059771852360797 0.0 0.7742275032520141 0.9456290139465237 {I|L}TG{[QG]|[NA]}P 2.4723 - 342 + 1 1.149 417097.5 1.0 7370 5445 12798 HBL1_DMSO_200M_050219_1,12817 HBL1_DMSO_200M_050219_1,12817,KLFSMLQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12818 65.205 156.0 536740.0 25 0 49590.0 + 1506 ALHNDFQAL 9 141 514.7613427086173 1027.5081324840346 2 514.7596313357353 MULTI CID FTMS 0 0 0 12798 132220.03125 0.2801492569925729 -3 0.3013687133789062 20 Unmodified _ALHNDFQAL_ ENSG00000181026|ENST00000332810|AEN;ENST00000557927.1_1_15:89172339-89173522:+|nuORF;nc|ENSG00000181026|Q8WTP8-2|AEN 49.93300154707207 0.0405168250806675 3 [{I|L}A]HND{M(Oxidation (M))|F}GAA{I|L} 10 2 + 66.571 0.0 0.0 6.4789 6.4789 78.079 0.0 0.0 0.0 12.351905544230348 46.82679756013101 12.351905544230348 0.5115252244738144 0 0.9247425010840048 1.0969100130080565 0.3807196863200844 0.5994850021680094 [{I|L}A]HND{M(Oxidation (M))|F}GAA{I|L};[{I|L}A]HND{M(Oxidation (M))|F}QA{I|L};[{I|L}A]HGGD{M(Oxidation (M))|F}QA{I|L};[AG]{M(Oxidation (M))|F}E[RH]GAA{I|L};[AG]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}GAA{I|L};[AG]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}QA{I|L};[AG]{M(Oxidation (M))|F}E[RH]QA{I|L};[{I|L}A]HGGD{M(Oxidation (M))|F}GAA{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}GAA{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E[RH]GAA{I|L} 6.4789;6.4291;5.266;5.1286;5.1286;5.0788;5.0788;5.0035;4.6808;4.6808 -;+;-;-;-;-;-;-;-;- + 844 1 1.149 71281.9 1.0 7371 5445 12798 HBL1_DMSO_200M_050219_1,12818 HBL1_DMSO_200M_050219_1,12818,ALHNDFQAL True True ALHNDFQAL 65.205444 514.759631335735 4233898.5 12798.0 ENST00000557927.1_1_15:89172339-89173522:+|nuORF;;ENSG00000181026|ENST00000332810|AEN;;nc|ENSG00000181026|Q8WTP8-2|AEN 6.525504112243652 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12820 65.21 6.6 7257700.0 25 0 610170.0 + 39545 VAWVGQQV 8 84 443.74216605540033 885.4697791776007 2 443.7426940798759 MULTI CID FTMS 0 0 0 12819 2576405.0 0.2899072656376502 2 -0.17431640625 1 Unmodified _VAWVGQQV_ ENSG00000170540|ENST00000304414|ARL6IP1;nc|ENSG00000170540|Q15041-2|ARL6IP1 30.19836241096484 0.408853459428176 3 {[VA]|[{I|L}G]}WV 4 4 22.976 0.0 0.0 2.5947 0.0 0.0 0.0 427.19234932824446 427.19234932824446 4.057422733489414 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 + {[VA]|[{I|L}G]}WV 2.5947 + + 119 1 1.165 46717.6 1.0 7372 5446 12819 HBL1_DMSO_200M_050219_1,12820 HBL1_DMSO_200M_050219_1,12820,VAWVGQQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12821 65.211 6.1 3899700.0 25 0 303900.0 + 35728 SVHKGFAFV 9 62 496.2725375963049 990.5305222594098 2 496.2721130251884 MULTI CID FTMS 0 0 0 12819 2480993.25 0.6759921458272425 1 -0.0236358642578125 2 Unmodified _SVHKGFAFV_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 15.847184025352805 0.4077185912009129 3 {M(Oxidation (M))|F}V 2 7 17.518 0.0 0.0 1.7686 0.0 0.0 726.3814679832861 0.0 726.3814679832861 0.0 9.559319556497243 0.0 0.0 0 0.5 0.0 0.0 0.0 + {M(Oxidation (M))|F}V 1.7686 + + 24 + 1 1.165 24121.5 1.0 7373 5446 12819 HBL1_DMSO_200M_050219_1,12821 HBL1_DMSO_200M_050219_1,12821,SVHKGFAFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12822 65.212 3.4 12548000.0 25 0 1294000.0 37351 TKHSILTLK 9 78 520.8269324888306 1039.6393120444611 2 520.8273193240166 MULTI CID FTMS 0 0 0 12819 6373379.0 0.3792553303538201 -2 0.210479736328125 3 Unmodified _TKHSILTLK_ ENST00000415794.1_1_3:139212742-139212994:+|nuORF 15.248480904072842 0.4239247793462406 3 A{M(Oxidation (M))|F} 2 9 17.959 0.0 0.0 1.7274 0.0 0.0 803.522763437819 0.0 803.522763437819 0.0 0.7525749891599531 0.0 0.0 0 0.0 0.0 0.0 0.0 A{M(Oxidation (M))|F} 1.7274 - 75 + 1 1.165 42484.5 1.0 7374 5446 12819 HBL1_DMSO_200M_050219_1,12822 HBL1_DMSO_200M_050219_1,12822,TKHSILTLK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12823 65.213 6.6 8462000.0 25 0 903590.0 + 252 ADAPIVAHL 9 71 453.75559121006125 905.4966294869224 2 453.7558471560478 MULTI CID FTMS 0 0 0 12819 5204432.0 1.0 0 0.0 4 Unmodified _ADAPIVAHL_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 49.66892048692302 0.0410958345688192 3 {[DA]|[EG]}AP{I|L}VAH{I|L} 9 0 + 70.34 0.0 0.0 7.7681 7.7681 97.263 0.0 0.0 0.0 37.663800089887545 6.690067809585756 6.690067809585756 70.33986249165785 0 0.9247425010840048 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}AP{I|L}VAH{I|L} 7.7681 + + 134 + 1 1.165 49593.8 1.0 7375 5446 12819 HBL1_DMSO_200M_050219_1,12823 HBL1_DMSO_200M_050219_1,12823,ADAPIVAHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12824 65.214 7.0 8814700.0 25 0 1449500.0 + 44595 YPFKPPKI 8 84 330.5321852651292 988.5747263955876 3 330.5320617556572 MULTI CID FTMS 0 0 0 12819 2973520.25 0.1699916185298577 -6 0.5271759033203125 5 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 50.91 0.0 0.0 5.1498 5.1498 82.808 0.0 0.0 0.0 24.967623647059902 5.810935890735216 5.810935890735216 7.367585652254185 0 0.0 1.2218487496163564 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};YP{M(Oxidation (M))|F}KP{I|L}[KP];YP{M(Oxidation (M))|F}K{I|L}P[KP];Y{I|L}MKPPK{I|L};Y{I|L}MKP{I|L}[KP];Y{I|L}MK{I|L}P[KP] 5.1498;4.4045;4.2264;4.092;3.3467;3.1686 +;-;-;-;-;- + 200 + 1 1.165 57518.6 1.0 7376 5446 12819 HBL1_DMSO_200M_050219_1,12824 HBL1_DMSO_200M_050219_1,12824,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12825 65.215 10.0 4001000.0 25 0 656690.0 + 17489 KPGKPGRDG 9 73 456.2565029054072 910.4984528776145 2 456.2565490603447 MULTI CID FTMS 0 0 0 12819 2445279.25 0.4281108461620613 -4 0.4057235717773437 6 Unmodified _KPGKPGRDG_ REV__ENSG00000134871|ENST00000360467|COL4A2 3.944395688203298 0.7769873103969335 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.165 36298.5 1.0 7377 5446 12819 HBL1_DMSO_200M_050219_1,12825 HBL1_DMSO_200M_050219_1,12825,KPGKPGRDG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12826 65.217 17.0 2036900.0 25 0 90910.0 26307 NQYICRLN 8 76 512.2549623075304 1022.4953716818608 2 512.2560912966728 MULTI CID FTMS 0 0 0 12819 1950455.875 1.0 0 0.0 7 Unmodified _NQYICRLN_ ENSG00000151718|ENST00000403733|WWC2;nc|ENSG00000151718|Q6AWC2-2|WWC2;nc|ENSG00000151718|Q6AWC2-3|WWC2;nc|ENSG00000151718|Q6AWC2-4|WWC2;nc|ENSG00000151718|Q6AWC2-6|WWC2;nc|ENSG00000151718|Q6AWC2-7|WWC2 9.347437153973935 0.7675937258251505 3 Q{I|L}G[C(Carbamidomethyl (C))N]QV 7 6 16.431 0.0 0.0 1.607 0.0 0.0 205.12810845343364 0.0 205.12810845343364 0.0 9.44160714254835 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 Q{I|L}G[C(Carbamidomethyl (C))N]QV 1.607 - 69 + 1 1.165 31638.5 1.0 7378 5446 12819 HBL1_DMSO_200M_050219_1,12826 HBL1_DMSO_200M_050219_1,12826,NQYICRLN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12827 65.218 11.0 3795500.0 25 0 241830.0 38264 TPWIIFNVA 9 77 530.7934772361718 0 530.7935058474541 PEAK CID FTMS 0 0 0 12819 1675397.0 0.925437046285123 -1 0.1043548583984375 8 Unmodified _TPWIIFNVA_ ENSG00000164588|ENST00000303230|HCN1 24.020572477871973 0.1646235280836931 3 PW{I|L}T 4 6 33.047 0.0 0.0 3.1189 0.0 0.0 101.04878279511976 458.2352083795532 559.2839911746729 0.0 0.0 0.0 0.0 0 1.110924374808178 0.0 0.3494850021680094 0.0 PW{I|L}T 3.1189 - 60 + 1 1.165 43424.1 1.0 7379 5446 12819 HBL1_DMSO_200M_050219_1,12827 HBL1_DMSO_200M_050219_1,12827,TPWIIFNVA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12828 65.219 11.0 2791100.0 25 0 223270.0 + 22666 LPYSPRVL 8 63 472.78297824020416 943.5514035472085 2 472.7841369509697 MULTI CID FTMS 0 0 0 12819 1644377.25 0.5872392614374901 2 -0.17431640625 9 Unmodified _LPYSPRVL_ ENSG00000188603|ENST00000636147|CLN3;ENST00000564574.5_2_16:28493646-28503072:-|nuORF;ENST00000566083.6_2_16:28493835-28503080:-|nuORF;nc|ENSG00000261832|Q13286-2|CLN3;nc|ENSG00000261832|Q13286-3|CLN3;nc|ENSG00000261832|Q13286-4|CLN3;nc|ENSG00000261832|Q13286-5|CLN3;nc|ENSG00000261832|Q13286-7|CLN3 14.838274106304384 0.6917062315640577 3 {I|L}PYS 4 4 49.909 0.0 0.0 5.2895 0.0 0.0 0.0 480.29523645572505 480.29523645572505 39.42471268044436 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 0.0 0.0 + {I|L}PYS 5.2895 + + 21 + 1 1.165 27729.1 1.0 7380 5446 12819 HBL1_DMSO_200M_050219_1,12828 HBL1_DMSO_200M_050219_1,12828,LPYSPRVL False True LPYSPRVL 65.218979 472.78413695097 46029672.0 12819.0 ENSG00000188603|ENST00000636147|CLN3;;nc|ENSG00000261832|Q13286-3|CLN3;;nc|ENSG00000261832|Q13286-4|CLN3;;ENST00000566083.6_2_16:28493835-28503080:-|nuORF;;nc|ENSG00000261832|Q13286-7|CLN3;;ENST00000564574.5_2_16:28493646-28503072:-|nuORF;;nc|ENSG00000261832|Q13286-2|CLN3;;nc|ENSG00000261832|Q13286-5|CLN3 4.73323408762614 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12829 65.22 17.0 4442800.0 25 0 404330.0 + 1940 AMKVPLSL 8 101 429.75927735846216 857.5040017837243 2 429.7594482302666 MULTI CID FTMS 0 0 0 12819 1407233.375 0.1411495102161957 -4 0.4057235717773437 10 Unmodified _AMKVPLSL_ REV__ENST00000480436.5_1_20:13415759-13610725:-|nuORF;REV__nc|ENSG00000089123|Q9H6P5-3|TASP1 24.67388899826682 0.525179942228231 3 {[DS]|[MA]|[CV]|TT}{I|L} 3 -1 30.77 0.0 0.0 3.5883 0.0 0.0 0.0 539.3206881158811 539.3206881158811 8.551434250963936 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}{I|L} 3.5883 - 111 + 1 1.165 66524.0 1.0 7381 5446 12819 HBL1_DMSO_200M_050219_1,12829 HBL1_DMSO_200M_050219_1,12829,AMKVPLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12830 65.221 18.0 1380500.0 25 0 342310.0 + 27257 PHAGLLLL 8 45 417.26568765542766 832.5168223776553 2 417.2655822634697 MULTI CID FTMS 0 0 0 12819 1311470.0 0.6064299693772448 -2 0.210479736328125 11 Unmodified _PHAGLLLL_ REV__ENSG00000103978|ENST00000389834|TMEM87A;REV__ENST00000448392.5_1_15:42560200-42565602:-|nuORF;REV__ENST00000562946.5_1_15:42519884-42565596:-|nuORF;REV__nc|ENSG00000103978|Q8NBN3-2|TMEM87A 17.086550045450526 0.6584923310065985 3 {I|L}VA{[CA]|SS}{I|L} 6 -1 24.13 0.0 0.0 2.8984 0.0 0.0 244.1749777505053 0.0 244.1749777505053 0.0 18.645162531850872 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}VA{[CA]|SS}{I|L} 2.8984 - 42 + 1 1.165 27371.2 1.0 7382 5446 12819 HBL1_DMSO_200M_050219_1,12830 HBL1_DMSO_200M_050219_1,12830,PHAGLLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12831 65.223 23.0 1477600.0 25 0 158210.0 + 30376 RALPELTKL 9 66 347.5536269681894 1039.6390515047683 3 347.5534545779228 MULTI CID FTMS 0 0 0 12819 1085360.875 0.6995352618135222 -2 0.210479736328125 12 Unmodified _RALPELTKL_ ENSG00000173801|ENST00000393931|JUP 13.042465956692816 0.4836390050082244 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[EP]V 6 4 11.171 0.0 0.0 1.0745 0.0 0.0 0.0 371.24644831556833 371.24644831556833 -0.3368796720524791 0.0 -0.3368796720524791 0.0 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[EP]V 1.0745 - 23 1 1.165 37772.9 1.0 7383 5446 12819 HBL1_DMSO_200M_050219_1,12831 HBL1_DMSO_200M_050219_1,12831,RALPELTKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12832 65.224 19.0 1092000.0 25 0 80782.0 34042 SLKVSISQL 9 56 487.7967844294264 973.5790159256528 2 487.7979003787041 MULTI CID FTMS 0 0 0 12819 823604.75 0.6331865567796545 2 -0.17431640625 13 Unmodified _SLKVSISQL_ ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1 6.723162845929126 0.6799819581413107 3 {I|L} 1 8 13.099 0.0 0.0 1.3454 0.0 0.0 842.4839822115888 0.0 842.4839822115888 0.0 -0.0886438348021556 -0.0886438348021556 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3454 + + 11 + 1 1.165 23592.7 1.0 7384 5446 12819 HBL1_DMSO_200M_050219_1,12832 HBL1_DMSO_200M_050219_1,12832,SLKVSISQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12833 65.225 16.0 1644000.0 25 0 216490.0 + 40217 VGRKRYVSC 9 55 534.2924280413326 1066.5703031494652 2 534.2935668826103 MULTI CID FTMS 0 0 0 12819 783652.9375 0.7843747583713913 -1 0.1043548583984375 14 Unmodified _VGRKRYVSC_ REV__ENST00000505819.5_1_4:905489-905540:-|nuORF 2.059750862983233 0.8427793054688888 3 {I|L} 1 -1 11.42 0.0 0.0 1.0707 0.0 0.0 935.4752694354012 0.0 935.4752694354012 0.0 1.2966459310887544 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0707 - 23 + 1 1.165 30551.0 1.0 7385 5446 12819 HBL1_DMSO_200M_050219_1,12833 HBL1_DMSO_200M_050219_1,12833,VGRKRYVSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12834 65.227 73.0 950970.0 25 0 48401.0 -1 QNTQPCETC 9 132 540.7061859490249 1079.3978189648496 2 540.7063476443291 MULTI CID FTMS 0 0 0 12819 655812.125 0.4244076652120931 -5 0.4764022827148437 15 Carbamidomethyl (C) _QNTQPC(Carbamidomethyl (C))ETC_ ENSG00000152433|ENST00000282282|ZNF547;nc|ENSG00000256060|Q8IVP9-2|ZNF547 10.823927491677226 0.5436922275383211 3 {[QN]|[E{I|L}]|[KN]}TPVM 6 -1 24.421 0.0 0.0 2.2625 0.0 0.0 0.0 406.0600253459622 406.0600253459622 6.730534969250357 0.0 0.0 0.0 0 0.0 0.638272163982407 0.0 1.0114393726401687 {[QN]|[E{I|L}]|[KN]}TPVM 2.2625 - 386 1 1.165 62212.7 1.0 7386 5446 12819 HBL1_DMSO_200M_050219_1,12834 HBL1_DMSO_200M_050219_1,12834,QNTQPCETC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12835 65.228 42.0 870490.0 25 0 72027.0 + 931 AFIDQSQSL 9 77 504.7539126659756 0 504.7534362673759 PEAK CID FTMS 0 0 0 12819 306630.5 1.0 0 0.0 16 Unmodified _AFIDQSQSL_ ENSG00000167325|ENST00000300738|RRM1 8.593279151180031 0.3284076903191179 3 AA 2 8 10.969 0.0 0.0 1.0888 0.0 0.0 164.03033402160116 698.3633904378777 862.3937244594788 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AA 1.0888 - 13 + 1 1.165 35732.3 1.0 7387 5446 12819 HBL1_DMSO_200M_050219_1,12835 HBL1_DMSO_200M_050219_1,12835,AFIDQSQSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12836 65.229 29.0 2058300.0 25 0 112790.0 + 14168 IDDRAQVY 8 101 490.2471366847121 978.4797204362244 2 490.2477294802666 MULTI CID FTMS 0 0 0 12819 198888.0 0.1415372862324 -5 0.4764022827148437 17 Unmodified _IDDRAQVY_ REV__ENSG00000137076|ENST00000314888|TLN1;REV__ENSG00000171914|ENST00000636159|TLN2;REV__ENST00000378192.2_1_9:35723947-35725691:-|nuORF;REV__nc|ENSG00000137076|Q9Y490-2|TLN1 9.347437153973935 0.7675937258251505 3 Y 1 -1 15.485 0.0 0.0 1.5825 0.0 0.0 797.4054539340743 0.0 797.4054539340743 0.0 6.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5825 + + 112 + 1 1.165 52407.7 1.0 7388 5446 12819 HBL1_DMSO_200M_050219_1,12836 HBL1_DMSO_200M_050219_1,12836,IDDRAQVY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12838 65.236 297.0 694590.0 25 0 81420.0 + 17953 KQYGNEVFLA 10 174 584.802877636766 1167.5912023403318 2 584.8032714724541 MULTI CID FTMS 0 0 0 12837 306935.46875 0.4593477368626239 3 -0.2581634521484375 1 Unmodified _KQYGNEVFLA_ ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 45.69961567697781 0.105390671673896 3 [YQ]KGNEV{M(Oxidation (M))|F}A{I|L} 10 4 + 39.287 0.0 0.0 3.3648 3.3648 73.718 0.0 0.0 0.0 3.667975305217979 5.800728895428357 3.667975305217979 3.667975305217979 0 0.7092096562557454 0.0 0.5796896906561032 1.0356668758921828 [YQ]KGNEV{M(Oxidation (M))|F}A{I|L};{[TV]|[{I|L}S]}N[NG]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}A{I|L};[VS]Q[NG]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}A{I|L};[YQ][W{I|L}]EV{M(Oxidation (M))|F}A{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}NK{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}A{I|L};{[TV]|[{I|L}S]}TA{[MS]|[{M(Oxidation (M))|F}A]}EV{M(Oxidation (M))|F}A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ES]|[DT]|[{I|L}C]}NEV{M(Oxidation (M))|F}A{I|L};[YQ]KGGGEV{M(Oxidation (M))|F}A{I|L};[VS]P{[DS]|[MA]|[CV]|TT}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}A{I|L};[YQ][DG][KQ]V{M(Oxidation (M))|F}A{I|L} 3.3648;3.0506;2.8572;2.7901;2.6936;2.69;2.6393;2.5798;2.5688;2.5171 -;-;-;-;-;-;-;-;-;- 6115 1 1.165 151593.0 1.0 7389 5447 12837 HBL1_DMSO_200M_050219_1,12838 HBL1_DMSO_200M_050219_1,12838,KQYGNEVFLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12839 65.238 14.0 2819600.0 25 0 214970.0 -1 PLVIDCVK 8 69 472.2690951528654 942.5236373725309 2 472.2702514529228 MULTI CID FTMS 0 0 0 12837 2117769.25 0.5653943618193346 -3 0.2341156005859375 2 Carbamidomethyl (C) _PLVIDC(Carbamidomethyl (C))VK_ ENSG00000178971|ENST00000651323|CTC1;ENST00000584842.1_1_17:8141634-8146421:-|nuORF;nc|ENSG00000178971|Q2NKJ3-2|CTC1 5.760428011301431 0.7893668129297577 3 PYS 3 -1 20.445 0.0 0.0 2.1692 0.0 0.0 112.05768664229296 480.2934969537719 592.3511835960649 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 PYS 2.1692 - 56 + 1 1.165 36606.8 1.0 7390 5447 12837 HBL1_DMSO_200M_050219_1,12839 HBL1_DMSO_200M_050219_1,12839,PLVIDCVK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12840 65.245 439.0 486840.0 25 0 35928.0 + 29785 QPYPLPHV 8 170 475.7585031270245 949.5024533208492 2 475.7582275271416 MULTI CID FTMS 0 0 0 12837 255882.375 0.4966442301708618 -5 0.4293594360351562 3 Unmodified _QPYPLPHV_ ENSG00000179335|ENST00000395066|CLK3;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;ENST00000569406.5_1_15:74914809-74922221:+|nuORF;nc|ENSG00000179335|P49761-3|CLK3 28.17323086031832 0.4514957916281387 3 [QP]YP{I|L}PHV 8 0 + 33.993 0.0 0.0 3.5801 3.5801 74.792 0.0 0.0 0.0 6.989700043360188 4.227635923970698 4.227635923970698 4.227635923970698 0 0.5151201868453454 0.0 0.0 0.0 + + [QP]YP{I|L}PHV;[QP]YP{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[QP]YP{I|L}HPV;[QP]YS{I|L}{I|L}MV;[QP]Y[KG]KMV;[QP]YKK{[WT]|[RM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[QT][RN]V;[QP]Y[KA][KC]{I|L} 3.5801;3.1348;2.117;1.5172;1.1954;0.90823;0.73856;0.088408 +;-;-;-;-;-;-;- + 527 + 1 1.165 165928.8 1.0 7391 5447 12837 HBL1_DMSO_200M_050219_1,12840 HBL1_DMSO_200M_050219_1,12840,QPYPLPHV False True QPYPLPHV 65.245346 475.758227527142 8736212.0 12837.0 ENSG00000179335|ENST00000395066|CLK3;;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;;nc|ENSG00000179335|P49761-3|CLK3;;ENST00000569406.5_1_15:74914809-74922221:+|nuORF 5.725013097127278 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12841 65.255 539.0 485430.0 25 0 94051.0 + 12319 GSHGGDGW 8 174 386.6534622429653 771.2923715527305 2 386.6534911990166 MULTI CID FTMS 0 0 0 12837 234349.25 0.0363668408768324 -3 0.2341156005859375 4 Unmodified _GSHGGDGW_ REV__chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2 0.7936320650641473 0.8195151834710337 3 [VG]{M(Oxidation (M))|F}D{I|L} 5 -1 33.249 0.0 0.0 4.3108 0.0 0.0 0.0 237.0013216608032 237.0013216608032 7.384905781092982 0.0 0.0 0.0 0 0.6139829889124311 1.154901959985743 0.3252574989159953 0.0 [VG]{M(Oxidation (M))|F}D{I|L} 4.3108 - 121 + 1 1.165 203288.6 1.0 7392 5447 12837 HBL1_DMSO_200M_050219_1,12841 HBL1_DMSO_200M_050219_1,12841,GSHGGDGW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12842 65.264 495.0 309820.0 25 0 22290.0 -1 PVIQLCGL 8 197 450.25581721466665 898.4970814961333 2 450.2570068240166 MULTI CID FTMS 0 0 0 12837 223896.578125 0.2723594532200056 -3 0.2341156005859375 5 Carbamidomethyl (C) _PVIQLC(Carbamidomethyl (C))GL_ ENSG00000103021|ENST00000219299|CCDC113;nc|ENSG00000103021|Q9H0I3-2|CFAP263 6.354104778181461 0.7857632046190106 3 {I|L} 1 -1 13.099 0.0 0.0 1.4579 0.0 0.0 767.4020630408584 0.0 767.4020630408584 0.0 1.6789605096159654 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4579 + + 242 + 1 1.165 118782.6 1.0 7393 5447 12837 HBL1_DMSO_200M_050219_1,12842 HBL1_DMSO_200M_050219_1,12842,PVIQLCGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12843 65.272 491.0 482590.0 25 0 29345.0 + + 27417 DAHVFSQL 8 227 458.7695897848872 915.5246266365745 2 458.7698547244072 MULTI CID FTMS 0 0 0 12837 203038.09375 0.1614879505764604 -5 0.4293594360351562 6 Unmodified _PIPPPWPL_ nc|ENSG00000152061|Q5R372-9|RABGAP1L 17.086550045450526 0.6584923310065985 3 {[DA]|[EG]}HV{M(Oxidation (M))|F}S 6 -1 23.197 0.0 0.0 2.5337 0.0 0.0 0.0 256.20648633799937 256.20648633799937 9.217131163859314 0.0 0.0 0.0 0 0.0 0.744727494896694 0.75 0.0 {[DA]|[EG]}HV{M(Oxidation (M))|F}S 2.5337 - 364 1 1.165 177283.3 1.0 7394 5447 12837 HBL1_DMSO_200M_050219_1,12843 HBL1_DMSO_200M_050219_1,12843,PIPPPWPL False False DAHVFSQL 65.272219 458.769854724407 1055243.0 12837.0 nc|ENSG00000152061|Q5R372-9|RABGAP1L 5.538032054901123 2.0 False 8.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12844 65.28 428.0 633790.0 25 0 99121.0 + 29219 YFIRDVKSL 9 189 570.8272819547037 1139.6400109762071 2 570.8257324099541 MULTI CID FTMS 0 0 0 12837 189722.03125 0.3365963934744341 6 -0.4486236572265625 7 Unmodified _QGLPVPCVKSI_ ENSG00000113318|ENST00000265081|MSH3 37.250883937326 0.2547447105151842 3 [TP][KP]GVDVKS{I|L} 11 6 + 50.482 0.0 0.0 4.4296 4.4296 70.88 0.0 0.0 0.0 0.3096836304251127 4.146197269414479 0.3096836304251127 0.3096836304251127 0 1.0189301784845295 0.8860566476931632 0.7416440611282626 0.3494850021680094 [TP][KP]GVDVKS{I|L};[Y{M(Oxidation (M))|F}]{I|L}RDVKS{I|L};Y{M(Oxidation (M))|F}{I|L}RDVKS{I|L};[VG]SVR{I|L}{M(Oxidation (M))|F}YS{I|L};[VG][HK]{[WS]|[C(Carbamidomethyl (C)){I|L}]}VKS{I|L};[AG]{I|L}TR{I|L}{M(Oxidation (M))|F}YS{I|L};[VG][HK]T[TA]VKS{I|L};[{I|L}V][NP]GVDVKS{I|L};[{I|L}V][HM]VDVKS{I|L};[AG]T{I|L}R{I|L}{M(Oxidation (M))|F}YS{I|L} 4.4296;4.4024;4.0658;3.9974;3.9834;3.8261;3.768;3.7465;3.7403;3.7222 -;-;-;-;-;-;-;-;-;- 1541 1 1.165 205761.3 1.0 7395 5447 12837 HBL1_DMSO_200M_050219_1,12844 HBL1_DMSO_200M_050219_1,12844,QGLPVPCVKSI False False YFIRDVKSL 65.27985 570.825732409954 5346084.25 12837.0 ENSG00000113318|ENST00000265081|MSH3 5.754580974578857 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12845 65.288 443.0 369270.0 25 0 26293.0 -1 QDCCVKTELLG 11 162 633.296313326995 1264.57807372079 2 633.2944213747978 MULTI CID FTMS 0 0 0 12837 182777.3125 0.0399927383820951 -3 0.2341156005859375 8 Carbamidomethyl (C) _QDC(Carbamidomethyl (C))CVKTELLG_ ENSG00000181090|ENST00000460843|EHMT1;nc|ENSG00000181090|Q9H9B1-3|EHMT1;nc|ENSG00000181090|Q9H9B1-4|EHMT1 12.240655878213236 0.7805268987462184 3 {[QS]|[NT]}A{[C(Carbamidomethyl (C))E]|[WC]}VWC{I|L}G{I|L} 11 -1 + 32.679 0.0 0.0 2.5841 2.5841 66.692 0.0 0.0 0.0 3.448663808963392 9.03341952818326 3.448663808963392 0.3778856088939974 0 0.5924778212679485 0.4685210829577448 0.5669015600442578 1.0114393726401687 {[QS]|[NT]}A{[C(Carbamidomethyl (C))E]|[WC]}VWC{I|L}G{I|L};{[QS]|[NT]}AD{[CA]|SS}VWC{I|L}G{I|L};{[QS]|[NT]}AD{[WS]|[C(Carbamidomethyl (C)){I|L}]}[CS]V{I|L}G{I|L};{[QS]|[NT]}AD{[WS]|[C(Carbamidomethyl (C)){I|L}]}[VS]C{I|L}G{I|L};{[QS]|[NT]}A{[C(Carbamidomethyl (C))E]|[WC]}V[CS]V{I|L}G{I|L};{[QS]|[NT]}AD{[CA]|SS}V[CS]V{I|L}G{I|L};{[QS]|[NT]}AD{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}[CS]VG{I|L};{[QS]|[NT]}AD[NS]{[{M(Oxidation (M))|F}D]|MM}V{I|L}G{I|L};{[QS]|[NT]}A[NS]D{[{M(Oxidation (M))|F}D]|MM}V{I|L}G{I|L};{[QS]|[NT]}A[SG]GD{[{M(Oxidation (M))|F}D]|MM}V{I|L}G{I|L} 2.5841;2.5543;2.1467;2.1003;1.9086;1.8811;1.7342;1.7164;1.6538;1.6263 -;-;-;-;-;-;-;-;-;- 2859 1 1.165 134072.1 1.0 7396 5447 12837 HBL1_DMSO_200M_050219_1,12845 HBL1_DMSO_200M_050219_1,12845,QDCCVKTELLG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12846 65.298 573.0 210810.0 25 0 11958.0 + + -1 MGAVALRI 8 158 423.7466093351202 0 423.7468139529228 PEAK CID FTMS 0 0 0 12837 163795.0625 1.0 0 0.0 9 Oxidation (M) _M(Oxidation (M))GAAVRII_ ENST00000398696.3_1_16:31765161-31765194:+|nuORF 32.116972079565 0.2111542247894177 3 GAVA{I|L}R 6 -1 21.464 0.0 0.0 2.5387 0.0 0.0 147.03699897156656 128.07203088931877 275.10902986088536 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.2742275032520141 GAVA{I|L}R 2.5387 - 207 + 1 1.165 95412.5 1.0 7397 5447 12837 HBL1_DMSO_200M_050219_1,12846 HBL1_DMSO_200M_050219_1,12846,MGAAVRII False False MGAVALRI 65.297758 423.746813952923 1101295.5 12837.0 ENST00000398696.3_1_16:31765161-31765194:+|nuORF 2.329326550165812 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12847 65.308 485.0 673320.0 25 0 46118.0 21402 LPGFLPLLV 9 194 484.8120496063912 967.6095462795824 2 484.8137084841728 MULTI CID FTMS 0 0 0 12837 143105.828125 0.3019826431676868 -5 0.4293594360351562 10 Unmodified _LPGFLPLLV_ MER52D_dup518|chr14:71230781-71232935:+|1.82709249221962|0.0272404342012767|6.07|46.0|23|2|sense 56.04830969593885 0.0282699710924866 3 [{I|L}P]V{M(Oxidation (M))|F}VAP{I|L}{I|L} 9 4 + 52.054 0.0 0.0 5.3797 5.3797 78.659 0.0 0.0 0.0 9.223440877778089 17.019309113210497 9.223440877778089 3.0102999566398125 0 0.805462187404089 2.0 0.0 0.0 [{I|L}P]V{M(Oxidation (M))|F}VAP{I|L}{I|L};[{I|L}P]V{M(Oxidation (M))|F}APV{I|L}{I|L};[{I|L}P]GT[KQ]V{I|L}{I|L};[{I|L}P]V{M(Oxidation (M))|F}AP{I|L}V{I|L};[{I|L}P]V{M(Oxidation (M))|F}AVP{I|L}{I|L};[{I|L}P]GTV[KQ]{I|L}{I|L};[{I|L}P]GT[KQ]{I|L}V{I|L};[{I|L}P]KE[KQ]{I|L}{I|L};{I|L}AA{I|L}KKPD{I|L};{I|L}AA{I|L}V[RN]V{I|L} 5.3797;5.0686;5.0092;4.9116;4.8866;4.8272;4.5161;4.1709;4.1423;4.028 -;-;-;-;-;-;-;-;-;- 4354 1 1.165 247782.8 1.0 7398 5447 12837 HBL1_DMSO_200M_050219_1,12847 HBL1_DMSO_200M_050219_1,12847,LPGFLPLLV True False TGPLVLNRV 65.3075 484.813708484173 1836212.25 12837.0 ENST00000456481.1_1_7:137407104-137407545:+|nuORF;;ENST00000489915.1_1_18:6462145-6462637:-|nuORF;;ENSG00000089009|ENST00000202773|RPL6;;ENST00000553205.1_1_12:112843569-112844143:-|nuORF 4.6047929128011065 2.0 False 9.0 False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 12848 65.32 729.0 88491.0 25 0 4802.3 -1 0 107 666.0444824099541 0 666.0444824099541 PEAK CID FTMS 0 0 0 -1 0 11 3 M 1 -1 2.7642 0.0 0.0 0.20782 0.0 0.0 664.7098621814331 531.2876070611936 1195.9974692426267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.20782 - 18 + 1 1.165 57156.4 1.0 7399 5447 12837 HBL1_DMSO_200M_050219_1,12848 HBL1_DMSO_200M_050219_1,12848, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12849 65.333 763.0 203530.0 25 0 16635.0 5500 DLTLFTHRGFL 11 145 660.3576239540556 0 660.3577148318291 PEAK CID FTMS 0 0 0 12837 126468.2890625 0.7655255464580364 -8 0.6494140625 12 Unmodified _DLTLFTHRGFL_ ENSG00000155380|ENST00000369626|SLC16A1;nc|ENSG00000155380|P53985-2|SLC16A1 26.268140514670165 0.2743391275734092 3 VT{I|L}T 4 8 37.242 0.0 0.0 2.8241 0.0 0.0 676.3390749571362 225.0884798639281 901.4275548210644 0.0 0.0 0.0 0.0 0 0.5 0.0 1.41944517631652 0.0 VT{I|L}T 2.8241 - 1314 + 1 1.165 117509.9 1.0 7400 5447 12837 HBL1_DMSO_200M_050219_1,12849 HBL1_DMSO_200M_050219_1,12849,DLTLFTHRGFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12850 65.34 304.0 604880.0 25 0 39314.0 + 42267 VSPQVLIRL 9 197 342.22192393170394 1023.6439423953118 3 342.2227050662041 MULTI CID FTMS 0 0 0 12837 127125.8125 0.1907617506939922 7 -0.5150833129882812 13 Unmodified _VSPQVLIRL_ REV__ENST00000392062.6_1_2:227704325-227729364:+|nuORF 6.1918466704503565 0.6985299363762377 3 VPDAK{I|L} 6 -1 45.848 0.0 0.0 4.4789 0.0 0.0 0.0 397.2573336236938 397.2573336236938 27.15137952415108 0.0 0.0 0.0 0 0.0269763493273798 0.0 0.3807196863200844 0.0 VPDAK{I|L} 4.4789 - 131 + 1 1.165 153479.6 1.0 7401 5447 12837 HBL1_DMSO_200M_050219_1,12850 HBL1_DMSO_200M_050219_1,12850,VSPQVLIRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12851 65.353 750.0 206260.0 25 0 11636.0 + 44462 YNAREEVYI 9 199 578.7863823419875 0 578.7871581912041 PEAK CID FTMS 0 0 0 12837 117871.9609375 0.7612033680283113 -1 0.0236358642578125 14 Unmodified _YNAREEVYI_ ENSG00000126217|ENST00000535094|MCF2L;nc|ENSG00000126217|O15068-10|MCF2L;nc|ENSG00000126217|O15068-2|MCF2L;nc|ENSG00000126217|O15068-3|MCF2L;nc|ENSG00000126217|O15068-4|MCF2L;nc|ENSG00000126217|O15068-5|MCF2L;nc|ENSG00000126217|O15068-6|MCF2L;nc|ENSG00000126217|O15068-8|MCF2L;nc|ENSG00000126217|O15068|MCF2L 34.40172386719151 0.0892392376003579 3 YAERV{I|L}E 7 5 37.648 0.0 0.0 3.258 0.0 0.0 114.04571282674996 178.05144678287346 292.0971596096234 0.0 0.0 0.0 0.0 0 2.298455006504028 0.0 0.9749073637206092 0.0 YAERV{I|L}E 3.258 - 1325 + 1 1.165 116864.0 1.0 7402 5447 12837 HBL1_DMSO_200M_050219_1,12851 HBL1_DMSO_200M_050219_1,12851,YNAREEVYI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12852 65.366 738.0 163560.0 25 0 9354.8 + + 11392 KILDSGKIVQI 11 184 607.8832953136018 0 607.8849975466728 PEAK CID FTMS 0 0 0 12837 144082.28125 1.0 0 0.0 15 Unmodified _GGIVRLFVLIQ_ ENSG00000136628|ENST00000366923|EPRS1 12.240655878213236 0.4295705806160874 3 {I|L}{I|L}D 3 -1 16.917 0.0 0.0 1.3937 0.0 0.0 128.10111103560354 741.4351900690061 869.5363011046097 0.0 0.0 0.0 0.0 0 0.6739312373807179 0.0 0.0 0.0 {I|L}{I|L}D 1.3937 - 313 + 1 1.165 88957.6 1.0 7403 5447 12837 HBL1_DMSO_200M_050219_1,12852 HBL1_DMSO_200M_050219_1,12852,GGIVRLFVLIQ False False KILDSGKIVQI 65.365891 607.884997546673 676871.875 12837.0 ENSG00000136628|ENST00000366923|EPRS1 2.7321301301320395 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12853 65.38 800.0 320850.0 25 0 24985.0 22408 LPTDPLPA 8 281 412.2307678717556 822.4469828103113 2 412.2305480837822 MULTI CID FTMS 0 0 0 12837 88550.09375 0.5862185817605035 -1 0.0236358642578125 16 Unmodified _LPTDPLPA_ ENST00000332118.10_1_11:126133397-126133748:-|nuORF 6.354104778181461 0.7857632046190106 3 V 1 8 11.783 0.0 0.0 1.4326 0.0 0.0 705.3675435786691 0.0 705.3675435786691 0.0 -0.9810650272762976 -0.9810650272762976 0.0 0 0.0 0.0 0.0 0.0 V 1.4326 - 135 + 1 1.165 197576.9 0.7400000095367432 7404 5447 12837 HBL1_DMSO_200M_050219_1,12853 HBL1_DMSO_200M_050219_1,12853,LPTDPLPA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12855 65.384 0.67 49993000.0 25 0 5509600.0 -1 SICMCSVSL 9 62 528.7275538496189 1055.4405547660376 2 528.7281982302666 MULTI CID FTMS 0 0 0 12854 81406544.0 0.7481668444844611 -2 0.17431640625 1 2 Carbamidomethyl (C) _SIC(Carbamidomethyl (C))MC(Carbamidomethyl (C))SVSL_ ENST00000325722.7_1_1:35899174-35899423:-|nuORF 26.88365393820708 0.1891292719743517 3 TGNVS{I|L} 6 -1 42.083 0.0 0.0 3.9873 0.0 0.0 466.1346913068375 0.0 466.1346913068375 0.0 26.59887825920684 0.0 0.0 0 0.8182503180159344 0.0 0.4247425010840047 0.4247425010840047 TGNVS{I|L} 3.9873 - 32 1 1.163 34176.4 1.0 7405 5448 12854 HBL1_DMSO_200M_050219_1,12855 HBL1_DMSO_200M_050219_1,12855,SICMCSVSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12856 65.385 4.8 8366300.0 25 0 841650.0 + 24849 MPLSTIREV 9 63 523.2887199091247 1044.5628868850492 2 523.2897216677666 MULTI CID FTMS 0 0 0 12854 6818126.0 0.2465019104087322 3 -0.1919021606445312 2 Unmodified _MPLSTIREV_ ENSG00000105810|ENST00000424848|CDK6 20.41453444215458 0.284085796332423 3 MP{I|L}ST 5 4 59.935 0.0 0.0 5.7378 0.0 0.0 0.0 512.2844332330686 512.2844332330686 32.487737688117235 0.0 0.0 0.0 0 0.8252574989159953 1.5228787452803376 0.0 0.0 + MP{I|L}ST 5.7378 + + 30 + 1 1.163 39220.2 1.0 7406 5448 12854 HBL1_DMSO_200M_050219_1,12856 HBL1_DMSO_200M_050219_1,12856,MPLSTIREV False True MPLSTIREV 65.385047 523.289721667767 277998048.0 12854.0 ENSG00000105810|ENST00000424848|CDK6 4.624244848887126 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12857 65.386 4.5 9722300.0 25 0 987500.0 + 41399 VPLDGRPMNI 10 50 556.2996133434849 1110.5846737537695 2 556.3002197146416 MULTI CID FTMS 0 0 0 12854 11034214.0 0.9567253609847092 -1 0.1506805419921875 3 Unmodified _VPLDGRPMNI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 20.41453444215458 0.5050059513928961 3 VP{I|L}D 4 6 55.662 0.0 0.0 5.0119 0.0 0.0 0.0 683.3296558477307 683.3296558477307 27.730012720637376 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.4247425010840047 0.0 + VP{I|L}D 5.0119 + + 53 + 1 1.163 41066.5 1.0 7407 5448 12854 HBL1_DMSO_200M_050219_1,12857 HBL1_DMSO_200M_050219_1,12857,VPLDGRPMNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12858 65.387 4.6 12279000.0 25 0 1690200.0 + 13534 HPDSHQLFI 9 82 547.2744675985609 1092.5343822639218 2 547.2750732302666 MULTI CID FTMS 0 0 0 12854 11145124.0 0.9919664517029414 -1 0.1506805419921875 4 Unmodified _HPDSHQLFI_ ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136268294-136268516:-|nuORF 19.256988751693697 0.3154191944385105 3 HQ{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 5 4 24.208 0.0 0.0 2.2158 0.0 0.0 436.17094618965 0.0 436.17094618965 0.0 14.744237387763093 0.0 0.0 0 0.5 0.0 0.0 0.0 + HQ{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.2158 + + 45 1 1.163 49640.6 1.0 7408 5448 12854 HBL1_DMSO_200M_050219_1,12858 HBL1_DMSO_200M_050219_1,12858,HPDSHQLFI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12859 65.389 5.1 5792300.0 25 0 660200.0 + 26284 NQTPVTLQV 9 64 500.276835462788 998.539117992376 2 500.2772094607353 MULTI CID FTMS 0 0 0 12854 7771621.0 0.4356579422824858 2 -0.10748291015625 5 Unmodified _NQTPVTLQV_ ENSG00000063244|ENST00000308924|U2AF2;nc|ENSG00000063244|P26368-2|U2AF2 25.399314129420983 0.2080152500878129 3 {[QN]|[E{I|L}]|[KN]}T 3 6 20.767 0.0 0.0 2.0798 0.0 0.0 0.0 652.3666380941916 652.3666380941916 8.777779374865506 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.2614393726401688 + {[QN]|[E{I|L}]|[KN]}T 2.0798 + + 23 1 1.163 28731.6 1.0 7409 5448 12854 HBL1_DMSO_200M_050219_1,12859 HBL1_DMSO_200M_050219_1,12859,NQTPVTLQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12860 65.39 17.0 3228600.0 25 0 313800.0 + 44602 YPFKPPKI 8 71 495.29454849115496 988.57454404911 2 495.2949096560478 MULTI CID FTMS 0 0 0 12854 2605712.25 0.2646156905998351 -4 0.384796142578125 6 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 30.22481116460888 0.4082965392918993 3 YP{M(Oxidation (M))|F}KP[KP]{I|L} 8 0 + 56.363 0.0 0.0 5.7014 5.7014 91.032 0.0 0.0 0.0 44.373212897245295 0.1772876696043113 0.1772876696043113 56.36291294060548 0 0.4247425010840047 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KP[KP]{I|L} 5.7014 + + 29 + 1 1.163 46623.7 1.0 7410 5448 12854 HBL1_DMSO_200M_050219_1,12860 HBL1_DMSO_200M_050219_1,12860,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12861 65.391 28.0 1027000.0 25 0 84664.0 20754 LLSSRRTQ 8 67 480.7828707948629 959.5511886565256 2 480.7830078005791 MULTI CID FTMS 0 0 0 12854 2151137.25 0.4608607240707666 -4 0.384796142578125 7 Unmodified _LLSSRRTQ_ ENSG00000160447|ENST00000291906|PKN3 0.7936320650641473 0.8195151834710337 3 S 1 7 1.5938 0.0 0.0 0.1661 0.0 0.0 664.4237910508601 205.0783632867797 869.5021543376398 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + S 0.1661 + + 3 + 1 1.163 28760.9 1.0 7411 5448 12854 HBL1_DMSO_200M_050219_1,12861 HBL1_DMSO_200M_050219_1,12861,LLSSRRTQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12862 65.392 21.0 1852400.0 25 0 135000.0 + 2279 AQHDPLLTGV 10 82 525.7825347971391 1049.550516661078 2 525.7835571169853 MULTI CID FTMS 0 0 0 12854 1860249.375 0.7570363659393546 -4 0.384796142578125 8 Unmodified _AQHDPLLTGV_ ENSG00000174021|ENST00000370645|GNG5;nc|ENSG00000133136|A0A804HLA8|GNG5B 32.037481411007896 0.2488723560272515 3 [QA]HDP{I|L}{I|L}TR 9 2 + 51.437 0.0 0.0 4.9008 4.9008 84.904 0.0 0.0 0.0 6.751736484954378 36.48834371105593 6.751736484954378 9.771212547196626 0 0.5 0.0 0.0 0.2614393726401688 [QA]HDP{I|L}{I|L}TR;[QA]HDP{I|L}T{I|L}R;[HD][QA]P{I|L}{I|L}TR;{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]P{I|L}{I|L}TR;[QA][WY]{I|L}{I|L}TR;{[SA]|[TG]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}V]{I|L}TR;[HD][QA]P{I|L}T{I|L}R;[QA]HDT[{I|L}P]{I|L}R;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}P[C(Carbamidomethyl (C))S]SV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[QA][C(Carbamidomethyl (C))K]GV 4.9008;3.9699;3.7257;3.2073;3.0707;2.8717;2.7947;2.6379;2.6336;2.5833 -;-;-;-;-;-;-;-;-;- 301 1 1.163 38638.1 1.0 7412 5448 12854 HBL1_DMSO_200M_050219_1,12862 HBL1_DMSO_200M_050219_1,12862,AQHDPLLTGV False True AQHDPLLTGV 65.392118 525.783557116985 58066252.0 12854.0 nc|ENSG00000133136|A0A804HLA8|GNG5B;;ENSG00000174021|ENST00000370645|GNG5 9.067977587381998 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12863 65.393 39.0 1529300.0 25 0 207180.0 + 24455 MHIPTGVI 8 71 434.24326329186215 866.4719736505243 2 434.2432739138603 MULTI CID FTMS 0 0 0 12854 1785095.75 0.7037018348583166 -2 0.17431640625 9 Unmodified _MHIPTGVI_ REV__ENSG00000133059|ENST00000367162|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK;REV__nc|ENSG00000133059|Q6XUX3-3|DSTYK 2.889219685676258 0.8067950007271085 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.163 54426.2 1.0 7413 5448 12854 HBL1_DMSO_200M_050219_1,12863 HBL1_DMSO_200M_050219_1,12863,MHIPTGVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12864 65.394 31.0 1533400.0 25 0 118860.0 + 17051 KLADDVDLEQV 11 70 622.8218267703558 1243.6291006075114 2 622.8222534060478 MULTI CID FTMS 0 0 0 12854 1565030.125 0.8709036146673483 -1 0.1506805419921875 10 Unmodified _KLADDVDLEQV_ ENSG00000165280|ENST00000358901|VCP;ENST00000480327.1_1_9:35060776-35061606:-|nuORF;ENST00000493886.5_1_9:35057116-35062147:-|nuORF 35.61225514009592 0.279986979807413 3 {NN|[MP]|[D{I|L}]|[EV]}E[KG]VD{I|L}EQV 11 4 + 70.622 0.0 0.0 5.6787 5.6787 81.39 0.0 0.0 0.0 5.417123080210303 8.4948500216801 5.417123080210303 4.247425010840061 0 0.5484550065040281 1.0969100130080565 1.4916440611282624 0.0 {NN|[MP]|[D{I|L}]|[EV]}E[KG]VD{I|L}EQV;{NN|[MP]|[D{I|L}]|[EV]}[KA]DVD{I|L}EQV;{NN|[MP]|[D{I|L}]|[EV]}Q[VS]VD{I|L}EQV;[AG]V{[TV]|[{I|L}S]}DVD{I|L}EQV;{NN|[MP]|[D{I|L}]|[EV]}E[KG]VD{I|L}G[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}E[RK]D{I|L}EQV;{[QN]|[E{I|L}]|[KN]}D[KG]VD{I|L}EQV;[AG]VE[VS]VD{I|L}EQV;[AG]EV[VS]VD{I|L}EQV;{NN|[MP]|[D{I|L}]|[EV]}[KA]DVD{I|L}G[W{I|L}] 5.6787;5.3372;5.295;5.2431;4.9956;4.9043;4.8834;4.8595;4.7281;4.6541 -;-;-;-;-;-;-;-;-;- 648 1 1.163 44327.3 1.0 7414 5448 12854 HBL1_DMSO_200M_050219_1,12864 HBL1_DMSO_200M_050219_1,12864,KLADDVDLEQV False True KLADDVDLEQV 65.394476 622.822253406048 14635490.0 12854.0 ENST00000480327.1_1_9:35060776-35061606:-|nuORF;;ENSG00000165280|ENST00000358901|VCP;;ENST00000493886.5_1_9:35057116-35062147:-|nuORF 8.79456901550293 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12865 65.396 26.0 1951400.0 25 0 158600.0 + 5183 DINTDGAVNF 10 91 533.2461512620185 1064.477749590837 2 533.2457153201103 MULTI CID FTMS 0 0 0 12854 1443702.25 0.8096668871183276 -1 0.1506805419921875 11 Unmodified _DINTDGAVNF_ ENSG00000143546|ENST00000368733|S100A8 43.77239144664712 0.1177314611616471 3 {NN|[MP]|[D{I|L}]|[EV]}NT[DG]A 7 3 27.681 0.0 0.0 2.6004 0.0 0.0 0.0 375.1709618313245 375.1709618313245 10.870375597948865 0.0 0.0 0.0 0 0.0 2.0 0.6861818737241735 0.5 + {NN|[MP]|[D{I|L}]|[EV]}NT[DG]A 2.6004 + + 224 1 1.163 45017.6 1.0 7415 5448 12854 HBL1_DMSO_200M_050219_1,12865 HBL1_DMSO_200M_050219_1,12865,DINTDGAVNF True True DINTDGAVNF 65.395655 533.24571532011 13068684.0 12854.0 ENSG00000143546|ENST00000368733|S100A8 6.708324591318767 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12866 65.397 29.0 4584100.0 25 0 365670.0 + 38079 TPIPITTSV 9 125 464.7702133278089 927.5258737224176 2 464.7700683474541 MULTI CID FTMS 0 0 0 12854 1394547.625 0.6008170639143909 -4 0.384796142578125 12 Unmodified _TPIPITTSV_ ENSG00000138593|ENST00000559471|SECISBP2L;ENST00000561203.1_1_15:49308706-49309212:-|nuORF;nc|ENSG00000138593|Q93073-2|SECISBP2L 16.942295170755138 0.3780752226737986 3 WSV 3 7 18.046 0.0 0.0 1.9456 0.0 0.0 537.3366223924596 0.0 537.3366223924596 0.0 6.452424927286845 0.0 0.0 0 0.0 0.0 0.5114393726401688 0.0 WSV 1.9456 - 227 + 1 1.163 108644.8 1.0 7416 5448 12854 HBL1_DMSO_200M_050219_1,12866 HBL1_DMSO_200M_050219_1,12866,TPIPITTSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12867 65.398 41.0 1423900.0 25 0 173070.0 + 4198 DAPKAGQLEAW 11 84 593.2983737722826 1184.5821946113651 2 593.2987548708916 MULTI CID FTMS 0 0 0 12854 1130913.0 0.4577568432019701 -2 0.17431640625 13 Unmodified _DAPKAGQLEAW_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 20.580933911654288 0.6070398941446662 3 [KP]QQ{I|L}EADAW 10 6 + 56.247 0.0 0.0 4.7483 4.7483 80.996 0.0 0.0 0.0 0.5411342943241237 25.91251590079672 0.5411342943241237 6.817496819840656 0 0.9247425010840048 0.0 0.3807196863200844 0.3807196863200844 [KP]QQ{I|L}EADAW;[KP]QQ{I|L}EGEAW;[KP]QQAD{I|L}EAW;[KP]QQ{I|L}EWA{[DA]|[EG]};[KP]QQ{I|L}EAW{[DA]|[EG]};[KP]QQA{[QN]|[E{I|L}]|[KN]}DAW;[KP]QQ{I|L}WEA{[DA]|[EG]};[KP]QQW{I|L}EA{[DA]|[EG]};[KP]QQA{[QN]|[E{I|L}]|[KN]}W{[DA]|[EG]} 4.7483;4.1728;3.3431;3.0981;2.9974;2.5899;2.5226;2.5226;0.83902 -;-;-;-;-;-;-;-;- 144 1 1.163 49757.4 1.0 7417 5448 12854 HBL1_DMSO_200M_050219_1,12867 HBL1_DMSO_200M_050219_1,12867,DAPKAGQLEAW False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12868 65.4 70.0 1711400.0 25 0 217120.0 25090 MPWYQRRI 8 80 383.8708287399912 1148.5906568201735 3 383.8708984255791 MULTI CID FTMS 0 0 0 12854 842431.0625 0.8519483371142161 -1 0.1506805419921875 14 Unmodified _MPWYQRRI_ ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1;nc|ENSG00000176623|Q96DB5-3|RMDN1 38.15118350030904 0.2652218139009398 3 [WP]R[RP]DP{I|L} 8 5 40.908 0.0 0.0 3.5616 0.0 0.0 0.0 128.01577307488824 128.01577307488824 27.413121923735417 0.0 0.0 0.0 0 0.0 2.0 0.0 0.805462187404089 [WP]R[RP]DP{I|L} 3.5616 - 70 1 1.163 104576.4 1.0 7418 5448 12854 HBL1_DMSO_200M_050219_1,12868 HBL1_DMSO_200M_050219_1,12868,MPWYQRRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12869 65.401 68.0 1673500.0 25 0 113730.0 + 41063 VMPEAVPEV 9 127 485.7494744952114 969.4843960572229 2 485.7494689822197 MULTI CID FTMS 0 0 0 12854 811117.125 0.4150327219605546 -4 0.384796142578125 15 Unmodified _VMPEAVPEV_ ENSG00000101191|ENST00000395343|DIDO1;nc|ENSG00000101191|Q9BTC0-1|DIDO1 36.04419817259434 0.0971720506436186 3 [EP]AVMV 6 4 45.138 0.0 0.0 4.6559 0.0 0.0 0.0 340.14907998449763 340.14907998449763 23.711375162600703 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 [EP]AVMV 4.6559 - 656 1 1.163 89832.9 1.0 7419 5448 12854 HBL1_DMSO_200M_050219_1,12869 HBL1_DMSO_200M_050219_1,12869,VMPEAVPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12870 65.403 68.0 782190.0 25 0 78281.0 + 11029 GAYAKALEI 9 90 468.26374246066416 934.5129319881283 2 468.2632934451103 MULTI CID FTMS 0 0 0 12854 557372.8125 1.0 0 0.0 16 Unmodified _GAYAKALEI_ ENSG00000135624|ENST00000258091|CCT7;ENST00000406551.2_1_6:150202103-150202502:+|nuORF;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 26.88365393820708 0.1891292719743517 3 [AG]YA 4 5 29.425 0.0 0.0 3.1487 0.0 0.0 0.0 569.3309611231471 569.3309611231471 5.105450102066129 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 + [AG]YA 3.1487 + + 210 1 1.163 48399.0 1.0 7420 5448 12854 HBL1_DMSO_200M_050219_1,12870 HBL1_DMSO_200M_050219_1,12870,GAYAKALEI False True GAYAKALEI 65.402897 468.26329344511 4378036.0 12854.0 nc|ENSG00000135624|Q99832-3|CCT7;;ENSG00000135624|ENST00000258091|CCT7;;nc|ENSG00000135624|Q99832-4|CCT7;;ENST00000406551.2_1_6:150202103-150202502:+|nuORF;;nc|ENSG00000135624|Q99832-2|CCT7 3.656231085459391 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12871 65.409 337.0 905530.0 25 0 69935.0 + 45172 YQLDPTASISA 11 193 583.2904654134418 1164.5663778936837 2 583.2906982302666 MULTI CID FTMS 0 0 0 12854 518230.0625 0.2310502781626906 -3 0.2786712646484375 17 Unmodified _YQLDPTASISA_ ENSG00000165637|ENST00000332211|VDAC2;nc|ENSG00000165637|P45880-1|VDAC2;nc|ENSG00000165637|P45880-2|VDAC2 69.33821966488729 0.0343223916712224 3 [YQ]{I|L}DPTAS 8 3 39.329 0.0 0.0 3.3771 0.0 0.0 0.0 286.1405425810239 286.1405425810239 17.7769181867186 0.0 0.0 0.0 0 0.5941876774005248 0.0 1.0501648626366045 0.8807196863200843 + [YQ]{I|L}DPTAS 3.3771 + + 5262 1 1.163 225060.2 1.0 7421 5448 12854 HBL1_DMSO_200M_050219_1,12871 HBL1_DMSO_200M_050219_1,12871,YQLDPTASISA True True YQLDPTASISA 65.409003 583.2922 14008809.0 12854.0 nc|ENSG00000165637|P45880-2|VDAC2;;nc|ENSG00000165637|P45880-1|VDAC2;;ENSG00000165637|ENST00000332211|VDAC2 6.518980344136556 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12872 65.411 63.0 1167100.0 25 0 113410.0 + 26221 NQIPTVNNL 9 121 506.7754190522648 0 506.7752258181572 PEAK CID FTMS 0 0 0 12854 443049.8125 0.1560060094293797 -4 0.384796142578125 18 Unmodified _NQIPTVNNL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 61.357469665136826 0.0154611170783358 3 YV{M(Oxidation (M))|F}M{I|L} 5 7 20.037 0.0 0.0 1.9809 0.0 0.0 116.10966271214824 239.0790957086547 355.18875842080297 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 YV{M(Oxidation (M))|F}M{I|L} 1.9809 - 459 + 1 1.163 64281.6 1.0 7422 5448 12854 HBL1_DMSO_200M_050219_1,12872 HBL1_DMSO_200M_050219_1,12872,NQIPTVNNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12873 65.417 366.0 524610.0 25 0 53648.0 9386 FISDDELLSI 10 170 576.2941632358855 0 576.2940551638603 PEAK CID FTMS 0 0 0 12854 431078.34375 1.0 0 0.0 19 Unmodified _FISDDELLSI_ ENSG00000197653|ENST00000673944|DNAH10;nc|ENSG00000197653|Q8IVF4|DNAH10 37.97399986684836 0.1321455838593572 3 {I|L}E[CS]MKSS 8 8 48.211 0.0 0.0 4.1902 0.0 0.0 200.1196365467983 82.06696497134999 282.1866015181483 0.0 0.0 0.0 0.0 0 1.4361818737241734 0.0 0.8494850021680094 1.0228787452803376 {I|L}E[CS]MKSS 4.1902 - 1065 + 1 1.163 145031.6 1.0 7423 5448 12854 HBL1_DMSO_200M_050219_1,12873 HBL1_DMSO_200M_050219_1,12873,FISDDELLSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12874 65.426 524.0 498700.0 25 0 27297.0 + 3063 AVLPRLHQL 9 244 349.55396087683255 1045.6400532306975 3 349.5536682009697 MULTI CID FTMS 0 0 0 12854 367403.09375 0.014222299314943 8 -0.5340118408203125 20 Unmodified _AVLPRLHQL_ ENSG00000117395|ENST00000236051|EBNA1BP2;ENST00000463906.1_1_1:43630116-43636618:-|nuORF 42.09456458481378 0.0639583784996157 3 {[VA]|[{I|L}G]}{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}YSS 9 5 49.623 0.0 0.0 4.7457 0.0 0.0 0.0 82.06695734195546 82.06695734195546 27.5773632997582 0.0 0.0 0.0 0 0.7302046884880937 2.0 1.1307196863200843 0.8494850021680094 {[VA]|[{I|L}G]}{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}YSS 4.7457 - 412 + 1 1.163 214768.3 1.0 7424 5448 12854 HBL1_DMSO_200M_050219_1,12874 HBL1_DMSO_200M_050219_1,12874,AVLPRLHQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12876 65.431 125.0 523600.0 25 0 44190.0 23571 LTMKRNEMI 9 109 568.2991996791862 1134.5838464251724 2 568.2994872927666 MULTI CID FTMS 0 0 0 12875 572300.625 0.0368169539346621 19 -1.46270751953125 1 Unmodified _LTMKRNEMI_ ENSG00000188171|ENST00000601440|ZNF626;ENST00000595094.1_1_19:20736613-20844252:-|nuORF;nc|ENSG00000188171|Q68DY1-3|ZNF626 16.942295170755138 0.3780752226737986 3 T{I|L}V{[{M(Oxidation (M))|F}H]|[RQ]}D 6 7 17.797 0.0 0.0 1.5686 0.0 0.0 334.16869857536614 85.03028284244374 419.1989814178099 0.0 0.0 0.0 0.0 0 0.5 0.0 0.8807196863200843 0.0 T{I|L}V{[{M(Oxidation (M))|F}H]|[RQ]}D 1.5686 - 172 + 1 1.163 51789.9 1.0 7425 5449 12875 HBL1_DMSO_200M_050219_1,12876 HBL1_DMSO_200M_050219_1,12876,LTMKRNEMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12877 65.432 70.0 710030.0 25 0 102260.0 + 22766 LQPRHGNPSI 10 86 559.8093245289361 0 559.8095580935478 PEAK CID FTMS 0 0 0 12875 373675.5625 1.0 0 0.0 2 Unmodified _LQPRHGNPSI_ REV__ENSG00000099290|ENST00000282633|WASHC2A;REV__ENSG00000172661|ENST00000623400|WASHC2C;REV__nc|ENSG00000099290|Q641Q2-2|WASHC2A;REV__nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-6|WASHC2C 14.838274106304384 0.3381107837965078 3 YS 2 -1 10.969 0.0 0.0 0.98148 0.0 0.0 211.11143362642844 653.3733004205686 864.4847340469971 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YS 0.98148 - 14 + 1 1.163 44504.0 1.0 7426 5449 12875 HBL1_DMSO_200M_050219_1,12877 HBL1_DMSO_200M_050219_1,12877,LQPRHGNPSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12878 65.434 18.0 2999000.0 25 0 258220.0 + 38139 TPMPPISSV 9 85 464.7439922700868 927.4734316069736 2 464.7443725466728 MULTI CID FTMS 0 0 0 12875 1452397.125 0.4452402666725934 -2 0.1972808837890625 3 Unmodified _TPMPPISSV_ ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10 26.88365393820708 0.1891292719743517 3 [VS][{I|L}A][HT]DSV 9 7 [VS][{I|L}A][HT]D + + 14.959 -4.9214 -0.68036 1.6129 1.6129 48.587 0.0 0.0 0.0 0.0 3.85016848222528 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 [VS][{I|L}A][HT]DSV 1.6129 - 86 + 1 1.163 49760.2 1.0 7427 5449 12875 HBL1_DMSO_200M_050219_1,12878 HBL1_DMSO_200M_050219_1,12878,TPMPPISSV False True TPMPPISSV 65.433638 464.744372546673 39887236.0 12875.0 ENSG00000086827|ENST00000200135|ZW10;;nc|ENSG00000086827|O43264-2|ZW10 1.7138733565807345 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12879 65.44 369.0 998970.0 25 0 158810.0 + 10938 GAKVGALI 8 193 364.7369235616537 727.4592941901075 2 364.7368652224541 MULTI CID FTMS 0 0 0 12875 576673.6875 0.7477191669072818 -1 0.046600341796875 4 Unmodified _GAKVGALI_ REV__nc|ENSG00000160305|Q14689-5|DIP2A 5.760428011301431 0.7893668129297577 3 EV{I|L}{I|L}RV 6 -1 + 57.982 0.0 0.0 7.9705 7.9705 81.386 0.0 0.0 0.0 29.69273760456403 0.2422750325201406 0.2422750325201406 0.2422750325201406 0 0.2614393726401688 1.6989700043360187 0.0 0.3252574989159953 EV{I|L}{I|L}RV;EV{I|L}VR{I|L};EV{I|L}{I|L}VR;EVV{I|L}R{I|L};EV{I|L}V{I|L}R;EVV{I|L}{I|L}R 7.9705;7.9372;7.9344;7.2814;7.0734;6.4176 -;-;-;-;-;- 174 + 1 1.163 286329.5 1.0 7428 5449 12875 HBL1_DMSO_200M_050219_1,12879 HBL1_DMSO_200M_050219_1,12879,GAKVGALI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12880 65.441 39.0 900520.0 25 0 74021.0 + -1 GSADRFVYV 9 65 507.2550554856282 506.2477790190282 1 507.2568542361259 MULTI CID FTMS 0 0 0 12875 515124.03125 0.6566270862608212 -1 0.046600341796875 5 ENST00000489853.1_1_1:31732921-31754364:-|nuORF;ENSG00000060688|ENST00000263694|SNRNP40;nc|ENSG00000060688|Q96DI7-2|SNRNP40 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V 4 -1 + 16.695 0.0 0.0 3.2977 3.2977 80.755 0.0 0.0 0.0 2.715299873086608 -4.27948461635836 -4.27948461635836 11.00833760139686 0 0.242992819099939 0.0 0.0 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V;{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 3.2977;1.1232 -;- 37 1 1.163 31763.7 1.0 7429 5449 12875 HBL1_DMSO_200M_050219_1,12880 HBL1_DMSO_200M_050219_1,12880, False False GSADRFVYV 65.441442 507.256854236126 4675421.0 12875.0 ENST00000489853.1_1_1:31732921-31754364:-|nuORF;;ENSG00000060688|ENST00000263694|SNRNP40;;nc|ENSG00000060688|Q96DI7-2|SNRNP40 2.4030817995468774 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12881 65.444 145.0 517660.0 25 0 28180.0 + 35108 SQWDSPMRV 9 113 553.2578917812924 1104.5012306293847 2 553.2587158083916 MULTI CID FTMS 0 0 0 12875 217573.28125 0.044310102345282 -3 0.220916748046875 6 Unmodified _SQWDSPMRV_ ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B 27.628801355627647 0.1796483985696185 3 NTWDSA 6 6 49.201 0.0 0.0 4.4546 0.0 0.0 0.0 427.2097262018188 427.2097262018188 38.2319095436452 0.0 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 NTWDSA 4.4546 - 937 + 1 1.163 62609.0 1.0 7430 5449 12875 HBL1_DMSO_200M_050219_1,12881 HBL1_DMSO_200M_050219_1,12881,SQWDSPMRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12882 65.452 401.0 382350.0 25 0 26301.0 + 26219 NQINELKEL 9 198 550.8008376950771 1099.587122456954 2 550.8024169802666 MULTI CID FTMS 0 0 0 12875 229836.71875 0.5025679925938823 -2 0.1972808837890625 7 Unmodified _NQINELKEL_ ENSG00000152359|ENST00000428202|POC5;nc|ENSG00000152359|Q8NA72-2|POC5;nc|ENSG00000152359|Q8NA72-3|POC5 59.36838082759317 0.0264317782606298 3 {[QN]|[E{I|L}]|[KN]}{I|L}NE{I|L}AVS{I|L} 10 3 + 54.457 0.0 0.0 4.9525 4.9525 76.306 0.0 0.0 0.0 10.64240896254688 2.552725051033065 2.552725051033065 2.552725051033065 0 1.778659694992122 0.3372421683184259 1.16944517631652 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}NE{I|L}AVS{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}NE{I|L}AVTV;{[QN]|[E{I|L}]|[KN]}{I|L}GGE{I|L}AVS{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}NE{I|L}A{I|L}SV;{[QN]|[E{I|L}]|[KN]}{I|L}GGE{I|L}AVTV;{[QN]|[E{I|L}]|[KN]}{I|L}GGE{I|L}A{I|L}SV;{[QN]|[E{I|L}]|[KN]}{I|L}N{[QV]|[N{I|L}]|[RA]|[KV]}{[QG]|[NA]}S{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}N{[QV]|[N{I|L}]|[RA]|[KV]}{[QG]|[NA]}TV;{[QN]|[E{I|L}]|[KN]}[PS][TA]{I|L}A[W{I|L}];GGE{I|L}{I|L}[{I|L}P]C[W{I|L}] 4.9525;4.7204;4.1191;3.8922;3.8869;3.0587;2.2817;2.0496;1.5922;1.5784 -;-;-;-;-;-;-;-;-;- 3414 + 1 1.163 120429.9 1.0 7431 5449 12875 HBL1_DMSO_200M_050219_1,12882 HBL1_DMSO_200M_050219_1,12882,NQINELKEL True True NQINELKEL 65.451534 550.802416980267 2900101.75 12875.0 nc|ENSG00000152359|Q8NA72-3|POC5;;nc|ENSG00000152359|Q8NA72-2|POC5;;ENSG00000152359|ENST00000428202|POC5 4.513027350107829 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12883 65.46 453.0 309620.0 25 0 13764.0 + -1 DAFSAQMV 8 124 867.9061976134719 1733.7978422937438 2 867.9032470583916 MULTI CID FTMS 0 0 0 12875 189030.140625 0.434652810676728 -11 0.9235382080078124 8 ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1 3 [MN]PD{I|L}DA{[QV]|[N{I|L}]|[RA]|[KV]}MQD{[ET]|[MV]}Q 15 -1 + 75.221 0.0 0.0 4.3385 4.3385 76.601 0.0 0.0 0.0 20.000000000000007 5.044774213264631 5.044774213264631 3.945990182825426 0 0.0 1.5228787452803376 1.7179001828205482 0.5010912013506126 [MN]PD{I|L}DA{[QV]|[N{I|L}]|[RA]|[KV]}MQD{[ET]|[MV]}Q;[MN]PD{I|L}DA{[QV]|[N{I|L}]|[RA]|[KV]}MDNM{I|L}Q;[MN]PD{I|L}DA{[QV]|[N{I|L}]|[RA]|[KV]}MQDQ{[ET]|[MV]};[MN]PD{I|L}DA{[QV]|[N{I|L}]|[RA]|[KV]}MQAS[WE];[MN]PD{I|L}DA{[QV]|[N{I|L}]|[RA]|[KV]}MQ[EC]{I|L}Q;[MN]PD{I|L}W{[QV]|[N{I|L}]|[RA]|[KV]}MQD{[ET]|[MV]}Q;[MN]PD{I|L}W{[QV]|[N{I|L}]|[RA]|[KV]}MDNM{I|L}Q;[MN]PD{I|L}W{[QV]|[N{I|L}]|[RA]|[KV]}MQDQ{[ET]|[MV]};[MN]PD{I|L}W{[QV]|[N{I|L}]|[RA]|[KV]}MQAS[WE];[MN]PD{I|L}W{[QV]|[N{I|L}]|[RA]|[KV]}MQ[EC]{I|L}Q 4.3385;4.1109;4.0475;3.9807;3.9553;3.9526;3.725;3.6617;3.5948;3.5694 -;-;-;-;-;-;-;-;-;- 4545 + 1 1.163 100684.0 1.0 7432 5449 12875 HBL1_DMSO_200M_050219_1,12883 HBL1_DMSO_200M_050219_1,12883, False False DAFSAQMV 65.459594 867.903247058392 675358.125 12875.0 ENSG00000165671|ENST00000439151|NSD1;;nc|ENSG00000165671|Q96L73-2|NSD1;;nc|ENSG00000165671|Q96L73-3|NSD1 4.261674324671428 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12884 65.467 439.0 78903.0 25 0 6993.7 -1 YLVGMICYYGK 11 87 691.8275007441991 0 691.8263427615166 PEAK CID FTMS 0 0 0 12875 147819.546875 0.7489453120237675 -2 0.1972808837890625 9 Carbamidomethyl (C),Oxidation (M) _YLVGM(Oxidation (M))IC(Carbamidomethyl (C))YYGK_ ENSG00000166348|ENST00000687698|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-4|USP54;nc|ENSG00000166348|Q70EL1-6|USP54;nc|ENSG00000166348|Q70EL1-7|USP54 6.2057823575117 0.47618401536486 3 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.39696 0.0 0.0 1020.4732255100796 211.1094912164672 1231.5827167265468 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.39696 + + 11 + 1 1.163 32729.1 1.0 7433 5449 12875 HBL1_DMSO_200M_050219_1,12884 HBL1_DMSO_200M_050219_1,12884,YLVGMICYYGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12885 65.479 657.0 459290.0 25 0 55542.0 -1 0 277 405.2402998527455 404.2330233861455 1 405.2431213259697 MULTI CID FTMS 0 0 0 12875 145599.859375 0.5788496780276006 -3 0.220916748046875 10 3 [{I|L}P]S 3 -1 23.469 0.0 0.0 5.8057 0.0 0.0 0.0 104.0405239567111 104.0405239567111 6.71599096955547 0.0 0.0 0.0 0 0.0536675412473082 2.0 0.0 0.0 [{I|L}P]S 5.8057 - 80 1 1.163 231707.5 1.0 7434 5449 12875 HBL1_DMSO_200M_050219_1,12885 HBL1_DMSO_200M_050219_1,12885, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12886 65.487 474.0 427400.0 25 0 32935.0 7987 ELYGPLMLV 9 231 517.7823480679687 1033.5501432027372 2 517.7827636599541 MULTI CID FTMS 0 0 0 12875 147449.3125 0.6048999379764424 3 -0.2025833129882812 11 Unmodified _ELYGPLMLV_ ENSG00000137207|ENST00000372422|YIPF3;ENST00000488966.1_1_6:43481054-43483343:-|nuORF 30.22481116460888 0.1466181017706357 3 {[QN]|[E{I|L}]|[KN]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}VMV{I|L} 9 6 + 53.568 0.0 0.0 5.183 5.183 87.975 0.0 0.0 0.0 25.114073050294788 10.33014589535184 10.33014589535184 21.294934551318065 0 0.9419628234359578 1.0457574905606752 0.9417509724019616 0.8921590589602533 {[QN]|[E{I|L}]|[KN]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}VMV{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{[CP]|[EA]}[{M(Oxidation (M))|F}T]V{I|L};{[TV]|[{I|L}S]}N{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VMV{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[WH]{I|L}[HS];[VS]Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VMV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q{[MS]|[{M(Oxidation (M))|F}A]}VMV{I|L};[Q{I|L}]N{[MS]|[{M(Oxidation (M))|F}A]}VMV{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[WH]HS{I|L};{[TV]|[{I|L}S]}GG{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VMV{I|L};{[QN]|[E{I|L}]|[KN]}HHRMV{I|L} 5.183;3.1226;2.7531;2.2595;2.2546;2.1073;2.0016;1.9251;1.8621;1.6674 -;-;-;-;-;-;-;-;-;- 1525 1 1.163 155164.5 1.0 7435 5449 12875 HBL1_DMSO_200M_050219_1,12886 HBL1_DMSO_200M_050219_1,12886,ELYGPLMLV False True NQLPRPPIV 65.487236 517.782763659954 1399557.75 12875.0 ENSG00000015285|ENST00000376701|WAS 3.787680546442668 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12888 65.491 3.4 16064000.0 25 0 2319500.0 + 30378 RALPELTKL 9 67 520.8269324888306 1039.6393120444611 2 520.8275024294853 MULTI CID FTMS 0 0 0 12887 14305337.0 0.8512557169058557 2 -0.1417007446289062 1 Unmodified _RALPELTKL_ ENSG00000173801|ENST00000393931|JUP 27.22323531849824 0.1848086127304535 3 {I|L}TK{I|L} 4 5 39.909 0.0 0.0 3.8388 0.0 0.0 566.3180449951766 0.0 566.3180449951766 0.0 26.81031895404267 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 + {I|L}TK{I|L} 3.8388 + + 76 1 1.163 47956.8 1.0 7436 5450 12887 HBL1_DMSO_200M_050219_1,12888 HBL1_DMSO_200M_050219_1,12888,RALPELTKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12889 65.493 5.3 9085200.0 25 0 1073900.0 24214 MAKIPVSL 8 69 429.75927735846216 857.5040017837243 2 429.7595397830009 MULTI CID FTMS 0 0 0 12887 9969807.0 1.0 0 0.0 2 Unmodified _MAKIPVSL_ ENSG00000126705|ENST00000673934|AHDC1 19.438996006549623 0.6237395211498085 3 {[DS]|[MA]|[CV]|TT}{I|L} 3 5 33.2 0.0 0.0 3.8717 0.0 0.0 0.0 539.3229464166624 539.3229464166624 13.99166239860314 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}{I|L} 3.8717 - 59 + 1 1.163 47025.6 1.0 7437 5450 12887 HBL1_DMSO_200M_050219_1,12889 HBL1_DMSO_200M_050219_1,12889,MAKIPVSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12890 65.494 5.0 14460000.0 25 0 2932000.0 + 44596 YPFKPPKI 8 64 330.5321852651292 988.5747263955876 3 330.5320312380791 MULTI CID FTMS 0 0 0 12887 10396917.0 0.5943758911850671 -2 0.10748291015625 3 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 3 YP{M(Oxidation (M))|F}KPP{I|L}K 8 2 + 52.403 0.0 0.0 5.3008 5.3008 78.359 0.0 0.0 0.0 26.867355479190067 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.0 1.0457574905606752 0.0 0.0 YP{M(Oxidation (M))|F}KPP{I|L}K;YP{M(Oxidation (M))|F}KPPK{I|L} 5.3008;4.9963 -;+ + 116 + 1 1.163 63499.3 1.0 7438 5450 12887 HBL1_DMSO_200M_050219_1,12890 HBL1_DMSO_200M_050219_1,12890,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12891 65.495 9.6 3643500.0 25 0 608690.0 + 13514 HMPITLIS 8 60 456.2565029054072 910.4984528776145 2 456.2565185427666 MULTI CID FTMS 0 0 0 12887 5711790.0 1.0 0 0.0 4 Unmodified _HMPITLIS_ REV__ENSG00000197181|ENST00000356766|PIWIL2;REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2 2.889219685676258 0.8067950007271085 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.163 34877.0 1.0 7439 5450 12887 HBL1_DMSO_200M_050219_1,12891 HBL1_DMSO_200M_050219_1,12891,HMPITLIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12892 65.497 67.0 1259000.0 25 0 89485.0 -1 FCCPHCSL 8 124 540.7061859490249 1079.3978189648496 2 540.7069579958916 MULTI CID FTMS 0 0 0 12887 1250927.125 0.809535292553071 -1 0.060882568359375 5 3 Carbamidomethyl (C) _FC(Carbamidomethyl (C))C(Carbamidomethyl (C))PHC(Carbamidomethyl (C))SL_ ENSG00000204644|ENST00000376883|ZFP57;nc|ENSG00000204644|Q9NU63-2|ZFP57;nc|ENSG00000204644|Q9NU63|ZFP57 5.760428011301431 0.7893668129297577 3 S{I|L} 2 -1 21.211 0.0 0.0 1.9651 0.0 0.0 861.2704976531294 0.0 861.2704976531294 0.0 6.602196946754047 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 S{I|L} 1.9651 + + 238 + 1 1.163 71179.3 1.0 7440 5450 12887 HBL1_DMSO_200M_050219_1,12892 HBL1_DMSO_200M_050219_1,12892,FCCPHCSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12893 65.498 53.0 1139100.0 25 0 111730.0 + 28511 PTLLDVIN 8 91 442.7565586008183 883.4985642684367 2 442.7564575076103 MULTI CID FTMS 0 0 0 12887 1134688.375 0.8920137926697208 -2 0.10748291015625 6 Unmodified _PTLLDVIN_ REV__ENSG00000180113|ENST00000316081|TDRD6;REV__nc|ENSG00000180113|O60522-2|TDRD6 9.347437153973935 0.7675937258251505 3 V 1 -1 11.783 0.0 0.0 1.3336 0.0 0.0 766.4192089601344 0.0 766.4192089601344 0.0 -7.6812135341915955 -7.6812135341915955 0.0 0 0.0 0.0 0.0 0.0 V 1.3336 + + 33 + 1 1.163 53606.7 1.0 7441 5450 12887 HBL1_DMSO_200M_050219_1,12893 HBL1_DMSO_200M_050219_1,12893,PTLLDVIN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12894 65.499 39.0 1313400.0 25 0 82343.0 + 253 ADAPIVAHL 9 84 453.75559121006125 905.4966294869224 2 453.7557861208916 MULTI CID FTMS 0 0 0 12887 995878.9375 0.1913520894307006 4 -0.2569198608398437 7 Unmodified _ADAPIVAHL_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 40.44857923139169 0.0729940656229577 3 {[DA]|[EG]}AP{I|L}VA[H{I|L}] 9 0 + 56.661 0.0 0.0 6.2574 6.2574 86.809 0.0 0.0 0.0 35.233871898888154 5.720967679505193 5.720967679505193 7.7815125038364386 0 0.3807196863200844 1.3979400086720375 0.0 0.0 + + {[DA]|[EG]}AP{I|L}VA[H{I|L}];{[DA]|[EG]}AP{I|L}V[H{I|L}]A 6.2574;5.398 +;- + 111 + 1 1.163 45895.7 1.0 7442 5450 12887 HBL1_DMSO_200M_050219_1,12894 HBL1_DMSO_200M_050219_1,12894,ADAPIVAHL True True ADAPIVAHL 65.49904 453.755786120892 128423844.0 12887.0 nc|ENSG00000110090|P50416-2|CPT1A;;ENSG00000110090|ENST00000265641|CPT1A 7.48960018157959 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12895 65.5 52.0 1160600.0 25 0 121040.0 30377 RALPELTKL 9 93 347.5536269681894 1039.6390515047683 3 347.5533935427666 MULTI CID FTMS 0 0 0 12887 905660.9375 0.5837153113044935 2 -0.1417007446289062 8 Unmodified _RALPELTKL_ ENSG00000173801|ENST00000393931|JUP 21.53697664764585 0.2571576504437394 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 6 16.84 0.0 0.0 1.6198 0.0 0.0 0.0 696.3930623935418 696.3930623935418 -0.9439587881354116 0.0 -0.9439587881354116 0.0 0 0.0 0.638272163982407 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 1.6198 + + 42 1 1.163 59246.7 1.0 7443 5450 12887 HBL1_DMSO_200M_050219_1,12895 HBL1_DMSO_200M_050219_1,12895,RALPELTKL False True RAIPELTKL 65.500382 347.553393542767 31310842.0 12887.0 ENSG00000168036|ENST00000349496|CTNNB1 4.723621050516765 3.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12896 65.502 46.0 1033300.0 25 0 51145.0 27722 PLLPWLAPA 9 88 489.2958834498205 976.577213966441 2 489.2954284548759 MULTI CID FTMS 0 0 0 12887 749277.4375 0.1678011492026238 -2 0.10748291015625 9 Unmodified _PLLPWLAPA_ ENSG00000020129|ENST00000373243|NCDN;nc|ENSG00000020129|Q9UBB6-2|NCDN 5.230669730166228 0.7320841359114558 3 Y 1 9 14.604 0.0 0.0 1.4954 0.0 0.0 795.5027491000333 0.0 795.5027491000333 0.0 2.821357152192814 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4954 - 65 + 1 1.163 39791.4 1.0 7444 5450 12887 HBL1_DMSO_200M_050219_1,12896 HBL1_DMSO_200M_050219_1,12896,PLLPWLAPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12897 65.504 104.0 576230.0 25 0 21977.0 -1 0 79 910.4224863885926 1818.830419843985 2 910.4243041872978 MULTI CID FTMS 0 0 0 12887 725143.9375 0.1245478094370809 -5 0.3861541748046875 10 3 [MN]PN{I|L}NADQ 9 -1 68.324 0.0 0.0 3.7565 0.0 0.0 0.0 818.3781412792994 818.3781412792994 44.60077508221467 0.0 0.0 0.0 0 0.5994850021680094 1.5228787452803376 0.0 0.4247425010840047 [MN]PN{I|L}NADQ 3.7565 - 538 + 1 1.163 45301.5 1.0 7445 5450 12887 HBL1_DMSO_200M_050219_1,12897 HBL1_DMSO_200M_050219_1,12897, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12898 65.509 281.0 382800.0 25 0 19522.0 + 4557 DAYRAEWQV 9 136 569.2693003519947 1136.5240477707894 2 569.2703735232353 MULTI CID FTMS 0 0 0 12887 561559.8125 1.0 0 0.0 11 Unmodified _DAYRAEWQV_ ENSG00000108064|ENST00000487519|TFAM;ENST00000373899.3_1_10:60146421-60154831:+|nuORF;nc|ENSG00000108064|Q00059-2|TFAM 40.23920728925047 0.0741434193262949 3 {[DA]|[EG]}{M(Oxidation (M))|F}V{I|L}C(Carbamidomethyl (C))WQV 9 4 + 45.416 0.0 0.0 3.996 3.996 72.563 0.0 0.0 0.0 1.9598868742881024 1.9598868742881024 1.9598868742881024 1.9598868742881024 0 1.3182503180159344 1.3979400086720375 0.0 0.6861818737241735 {[DA]|[EG]}{M(Oxidation (M))|F}V{I|L}C(Carbamidomethyl (C))WQV;{[DA]|[EG]}[YR]AEWQV;{[DA]|[EG]}[YR]AEQGEV;{[DA]|[EG]}{M(Oxidation (M))|F}V{I|L}C(Carbamidomethyl (C))WN{I|L};{[DA]|[EG]}[YR]AEQWV;YYA{[HG]|PP}{I|L}EGEV;{[DA]|[EG]}[YR]AQEGEV;YY[H{I|L}]EWQV;YYA{[HG]|PP}{I|L}EWV;YY[HQ]{I|L}EGEV 3.996;3.8236;3.7245;3.7076;3.5695;3.5057;3.4596;3.3693;3.3508;3.3508 -;+;-;-;-;-;-;-;-;- + 11448 + 1 1.163 87086.1 1.0 7446 5450 12887 HBL1_DMSO_200M_050219_1,12898 HBL1_DMSO_200M_050219_1,12898,DAYRAEWQV True True DAYRAEWQV 65.509056 569.270373523235 2660927.5 12887.0 ENSG00000108064|ENST00000487519|TFAM;;ENST00000373899.3_1_10:60146421-60154831:+|nuORF;;nc|ENSG00000108064|Q00059-2|TFAM 6.571876049041748 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12899 65.515 307.0 479510.0 25 0 95549.0 + 31017 RLFDRGDFYTA 11 96 680.8357494355718 1359.6569459379434 2 680.8366577029228 MULTI CID FTMS 0 0 0 12887 500624.75 0.4687913557874165 -1 0.060882568359375 12 Unmodified _RLFDRGDFYTA_ ENSG00000095002|ENST00000233146|MSH2 18.85280530406059 0.6429868799040831 3 A{M(Oxidation (M))|F} 2 10 38.583 0.0 0.0 2.8377 0.0 0.0 0.0 1138.5450022292423 1138.5450022292423 9.911356165197844 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 A{M(Oxidation (M))|F} 2.8377 - 213 + 1 1.163 111770.0 1.0 7447 5450 12887 HBL1_DMSO_200M_050219_1,12899 HBL1_DMSO_200M_050219_1,12899,RLFDRGDFYTA False True RLFDRGDFYTA 65.514682 680.836657702923 6205632.5 12887.0 ENSG00000095002|ENST00000233146|MSH2 6.169604142506917 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12900 65.521 327.0 309570.0 25 0 24637.0 + 38213 TPRIQGLTV 9 146 492.7961246241834 983.5776963151668 2 492.7961303591728 MULTI CID FTMS 0 0 0 12887 470616.5 0.6899501403519542 2 -0.1417007446289062 13 Unmodified _TPRIQGLTV_ ENSG00000197102|ENST00000360184|DYNC1H1 31.26834338654808 0.1333407332142048 3 {[TV]|[{I|L}S]}AV[QP]G{I|L}TV 10 4 + 46.168 0.0 0.0 4.6939 4.6939 80.781 0.0 0.0 0.0 6.443569497791302 19.83796566865003 6.443569497791302 6.777807052660798 0 0.8807196863200843 1.154901959985743 0.5 0.0 {[TV]|[{I|L}S]}AV[QP]G{I|L}TV;[HV]YVVGV{I|L}V;[{I|L}A]SV[QP]G{I|L}TV;{[VA]|[{I|L}G]}TV[QP]G{I|L}TV;{[TV]|[{I|L}S]}AV[QP]GT{I|L}V;[DV]G{[QV]|[N{I|L}]|[RA]|[KV]}VGV{I|L}V;[DV]N{[VA]|[{I|L}G]}VGV{I|L}V;[HV]YVGVV{I|L}V;[HV]YVVR{I|L}V;[HV]YVRV{I|L}V 4.6939;4.0048;3.9441;3.895;3.8795;3.859;3.8206;3.6988;3.6522;3.6522 -;-;-;-;-;-;-;-;-;- 973 1 1.163 81324.6 1.0 7448 5450 12887 HBL1_DMSO_200M_050219_1,12900 HBL1_DMSO_200M_050219_1,12900,TPRIQGLTV False True TPRIQGLTV 65.520617 492.796130359173 5692715.5 12887.0 ENSG00000197102|ENST00000360184|DYNC1H1 2.3910555044809976 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12901 65.527 328.0 201440.0 25 0 20643.0 23723 LTVFGMGQPSL 11 90 575.3031157690194 1148.5916786048388 2 575.3022949099541 MULTI CID FTMS 0 0 0 12887 380237.5 1.0 0 0.0 14 Unmodified _LTVFGMGQPSL_ ENSG00000107719|ENST00000263563|PALD1 14.40537977576856 0.7354982482299568 3 {I|L}VVEW 5 9 23.015 0.0 0.0 2.0038 0.0 0.0 0.0 519.2421969049436 519.2421969049436 0.9640156839957824 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}VVEW 2.0038 - 213 + 1 1.163 54903.7 1.0 7449 5450 12887 HBL1_DMSO_200M_050219_1,12901 HBL1_DMSO_200M_050219_1,12901,LTVFGMGQPSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12902 65.533 331.0 381490.0 25 0 52300.0 + 29812 QQIEELENHL 10 127 626.8123266469195 1251.6101003606389 2 627.3146850466728 MULTI CID FTMS 0 0 0 12887 354998.6875 1.0 0 0.0 15 Unmodified _QQIEELENHL_ ENSG00000139496|ENST00000381736|NUP58;ENST00000466694.5_1_13:25875911-25912925:+|nuORF;nc|ENSG00000139496|Q9BVL2-2|NUP58;nc|ENSG00000139496|Q9BVL2-3|NUP58 18.373094154950223 0.5392593366289069 3 [PA]EVV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{I|L} 9 8 49.306 0.0 0.0 3.9394 0.0 0.0 0.0 252.0847457065951 252.0847457065951 26.388962111335545 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.9634679910804403 0.3807196863200844 [PA]EVV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{I|L} 3.9394 - 2387 1 1.163 96179.8 1.0 7450 5450 12887 HBL1_DMSO_200M_050219_1,12902 HBL1_DMSO_200M_050219_1,12902,QQIEELENHL False True QQIEELENHL 65.532623 627.314685046673 2014819.875 12887.0 ENST00000466694.5_1_13:25875911-25912925:+|nuORF;;nc|ENSG00000139496|Q9BVL2-2|NUP58;;ENSG00000139496|ENST00000381736|NUP58;;nc|ENSG00000139496|Q9BVL2-3|NUP58 2.984434445699056 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12903 65.54 391.0 192900.0 25 0 104050.0 -1 0 55 964.4450831006824 2890.313419902247 3 964.7799560427666 MULTI CID FTMS 0 0 0 12887 324032.09375 0.2971099577336469 9 -0.7335662841796875 16 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}R[C(Carbamidomethyl (C))D]Q 9 -1 13.847 0.0 0.0 0.47908 0.0 0.0 0.0 1742.7722571427346 1742.7722571427346 8.362424760180435 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3494850021680094 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}R[C(Carbamidomethyl (C))D]Q 0.47908 - 133 1 1.163 59844.3 1.0 7451 5450 12887 HBL1_DMSO_200M_050219_1,12903 HBL1_DMSO_200M_050219_1,12903, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12904 65.548 458.0 430040.0 25 0 36993.0 + + 33714 LPFQKIQHSI 10 202 404.2334507410288 806.4523485488577 2 404.2359496951103 MULTI CID FTMS 0 0 0 12887 370905.84375 0.1654057455181947 -10 0.8089752197265625 17 Unmodified _SKSTGKSI_ ENSG00000102898|ENST00000219169|NUTF2;ENST00000568233.5_1_16:67899033-67902523:+|nuORF 16.942295170755138 0.6606234159769251 3 K{I|L}QHS{I|L} 6 -1 23.041 0.0 0.0 2.8571 0.0 0.0 82.02790735985566 0.0 82.02790735985566 0.0 12.071749131899168 0.0 0.0 0 0.0 0.0 1.1393016935150575 0.0 K{I|L}QHS{I|L} 2.8571 - 411 + 1 1.163 154800.6 1.0 7452 5450 12887 HBL1_DMSO_200M_050219_1,12904 HBL1_DMSO_200M_050219_1,12904,SKSTGKSI False False LPFQKIQHSI 65.547792 404.23594969511 4728798.0 12887.0 ENSG00000102898|ENST00000219169|NUTF2;;ENST00000568233.5_1_16:67899033-67902523:+|nuORF 4.812434832255046 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12905 65.556 364.0 435190.0 25 0 56148.0 + 39253 RILTDVNVV 9 166 514.8087706704728 1027.6029884077454 2 514.8083984255791 MULTI CID FTMS 0 0 0 12887 328790.5 0.4257229965847626 -5 0.3861541748046875 18 Unmodified _VAAKKAQDVV_ nc|ENSG00000175054|Q13535-3|ATR;nc|ENSG00000175054|Q13535-2|ATR;ENSG00000175054|ENST00000350721|ATR 29.081581746732265 0.3152867722954398 3 {I|L}{I|L}RTDVNVV 9 8 + 43.68 0.0 0.0 4.2506 4.2506 72.672 0.0 0.0 0.0 1.7134226453936847 9.49979802780188 1.7134226453936847 1.7134226453936847 0 0.6861818737241735 0.4436974992327127 0.2742275032520141 0.3252574989159953 {I|L}{I|L}RTDVNVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N{I|L}Q{I|L}VVV;{I|L}{I|L}RSEVNVV;{I|L}{I|L}RTDNVVV;{[VA]|[{I|L}G]}[VS]{I|L}EVNVV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]DVNVV;{I|L}{I|L}RSENVVV;[{I|L}T][R{I|L}]DVNVV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]DNVVV;{[VA]|[{I|L}G]}[VS]{I|L}ENVVV 4.2506;4.0839;4.0228;3.9577;3.7474;3.7474;3.7299;3.4563;3.4545;3.4545 -;-;-;-;-;-;-;-;-;- 6824 1 1.163 120018.0 1.0 7453 5450 12887 HBL1_DMSO_200M_050219_1,12905 HBL1_DMSO_200M_050219_1,12905,VAAKKAQDVV False False RILTDVNVV 65.555532 514.808398425579 10472555.0 12887.0 nc|ENSG00000175054|Q13535-3|ATR;;nc|ENSG00000175054|Q13535-2|ATR;;ENSG00000175054|ENST00000350721|ATR 3.214451869328817 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12906 65.563 404.0 337700.0 25 0 22600.0 + -1 YIITGYFMSV 10 151 605.2974560866222 1208.5803592400443 2 605.2989379763603 MULTI CID FTMS 0 0 0 12887 289973.25 0.3275048099647448 -2 0.10748291015625 19 Oxidation (M) _YIITGYFM(Oxidation (M))SV_ REV__ENSG00000204704|ENST00000377175|OR2W1 14.838274106304384 0.5985701837916485 3 [VS]P[KP]DS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W 10 -1 + 58.113 0.0 0.0 4.8084 4.8084 78.055 0.0 0.0 0.0 3.9013154280317366 6.422264452979121 3.9013154280317366 3.9013154280317366 0 0.5 1.6989700043360187 1.2478499570595205 0.0 [VS]P[KP]DS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W;[VP]S[KP]DS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W;[VS]P[KP]DS[VP]{[{M(Oxidation (M))|F}H]|[RQ]};[VP]RRDS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W;[VP]S[KP]DS[VP]{[{M(Oxidation (M))|F}H]|[RQ]};[PS]V[KP]DS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W;[VS]M{[WT]|[RM]}W[{I|L}T]W;[VP]EK{[VA]|[{I|L}G]}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SV;[VP]EK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W;[PA]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W 4.8084;4.4856;3.6364;3.6301;3.3136;3.0847;2.463;2.1992;2.1701;2.0907 -;-;-;-;-;-;-;-;-;- 1315 1 1.163 100572.8 1.0 7454 5450 12887 HBL1_DMSO_200M_050219_1,12906 HBL1_DMSO_200M_050219_1,12906,YIITGYFMSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12907 65.572 503.0 593620.0 25 0 127310.0 -1 0 175 408.2493143983367 407.2420379317367 1 408.2500793337822 MULTI CID FTMS 0 0 0 12887 263728.0625 0.1872563080226654 -5 0.3861541748046875 20 3 Y{I|L}{I|L} 3 -1 + 46.643 0.0 0.0 11.453 11.453 88.228 0.0 0.0 0.0 9.195925227640984 10.713337517843655 9.195925227640984 3.0102999566398125 0 0.4247425010840047 2.0 0.0 0.0 Y{I|L}{I|L};{I|L}Y{I|L};[Y{I|L}]{I|L} 11.453;10.714;9.8687 -;-;- 28 + 1 1.163 233876.2 1.0 7455 5450 12887 HBL1_DMSO_200M_050219_1,12907 HBL1_DMSO_200M_050219_1,12907, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12909 65.576 13.0 4572400.0 25 0 1414600.0 + 12320 GSHGGDGW 8 76 386.6534622429653 771.2923715527305 2 386.6537048220634 MULTI CID FTMS 0 0 0 12908 5152082.0 0.7995116104634107 1 -0.057281494140625 1 Unmodified _GSHGGDGW_ REV__chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2 0.7936320650641473 0.8195151834710337 3 [MT]SV 4 -1 26.643 0.0 0.0 3.4544 0.0 0.0 0.0 350.0839419475149 350.0839419475149 8.455612550363796 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [MT]SV 3.4544 - 47 1 1.159 54280.0 1.0 7456 5451 12908 HBL1_DMSO_200M_050219_1,12909 HBL1_DMSO_200M_050219_1,12909,GSHGGDGW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12910 65.577 11.0 1604500.0 25 0 245810.0 -1 ACCCLWLILG 10 36 633.296313326995 1264.57807372079 2 633.2972289919853 MULTI CID FTMS 0 0 0 12908 4448967.0 0.973459839560638 1 -0.057281494140625 2 3 Carbamidomethyl (C) _AC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))LWLILG_ ENSG00000167910|ENST00000301645|CYP7A1 7.910154910731844 0.6900473968920092 3 {I|L}{I|L}{[VA]|[{I|L}G]} 4 -1 21.198 0.0 0.0 1.6763 0.0 0.0 850.2949837319599 0.0 850.2949837319599 0.0 21.197887582883936 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{I|L}{[VA]|[{I|L}G]} 1.6763 + + 7 1 1.159 23177.9 1.0 7457 5451 12908 HBL1_DMSO_200M_050219_1,12910 HBL1_DMSO_200M_050219_1,12910,ACCCLWLILG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12911 65.578 5.1 5303700.0 25 0 800480.0 9152 FFWSAVTFS 9 54 546.2628846288324 1090.5112163244646 2 546.2634155154228 MULTI CID FTMS 0 0 0 12908 7638561.5 0.7465718179006904 -1 0.0844192504882812 3 Unmodified _FFWSAVTFS_ ENSG00000183018|ENST00000329078|SPNS2 7.910154910731844 0.6385446671287552 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[QT]S{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MS]|[{M(Oxidation (M))|F}A]} 9 6 + 15.62 0.0 0.0 1.4324 1.4324 72.411 0.0 0.0 0.0 11.64074964093992 1.2224122066494676 1.2224122066494676 4.704999916446797 0 0.0 1.3010299956639813 0.4247425010840047 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[QT]S{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MS]|[{M(Oxidation (M))|F}A]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[C(Carbamidomethyl (C))R]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MS]|[{M(Oxidation (M))|F}A]} 1.4324;1.0009 -;- 62 + 1 1.159 29781.6 1.0 7458 5451 12908 HBL1_DMSO_200M_050219_1,12911 HBL1_DMSO_200M_050219_1,12911,FFWSAVTFS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12912 65.579 10.0 2099900.0 25 0 145770.0 22349 LPSPLKQTI 9 49 498.8081250024448 995.6016970716896 2 498.8081848025322 MULTI CID FTMS 0 0 0 12908 4771935.0 0.7178236829835638 -1 0.0844192504882812 4 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 13.90604991867851 0.4602628045680013 3 [PS]{I|L} 3 6 29.437 0.0 0.0 2.9567 0.0 0.0 0.0 695.4100521344426 695.4100521344426 6.136218907515314 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 + [PS]{I|L} 2.9567 + + 21 1 1.159 22506.9 1.0 7459 5451 12908 HBL1_DMSO_200M_050219_1,12912 HBL1_DMSO_200M_050219_1,12912,LPSPLKQTI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 12913 65.58 11.0 3307500.0 25 0 223100.0 + 6643 EAVKMPVGI 9 76 472.2690951528654 942.5236373725309 2 472.2709838747978 MULTI CID FTMS 0 0 0 12908 3198393.0 0.8538953755620103 1 -0.057281494140625 5 Unmodified _EAVKMPVGI_ ENSG00000063176|ENST00000245222|SPHK2;nc|ENSG00000063176|Q9NRA0-2|SPHK2;nc|ENSG00000063176|Q9NRA0-3|SPHK2;nc|ENSG00000063176|Q9NRA0-4|SPHK2;nc|ENSG00000063176|Q9NRA0-5|SPHK2 13.50788311687929 0.4710407108020397 3 [{I|L}A][WP]GMV 7 7 24.569 0.0 0.0 2.6068 0.0 0.0 0.0 185.11736230833085 185.11736230833085 2.04628427264403 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A][WP]GMV 2.6068 - 324 1 1.159 34397.4 1.0 7460 5451 12908 HBL1_DMSO_200M_050219_1,12913 HBL1_DMSO_200M_050219_1,12913,EAVKMPVGI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12914 65.582 21.0 1393200.0 25 0 118460.0 14331 IEQRESRSL 9 61 559.2992923452332 1116.5840317572663 2 559.2991210818291 MULTI CID FTMS 0 0 0 12908 1760859.875 0.647317837764315 -1 0.0844192504882812 6 Unmodified _IEQRESRSL_ ENST00000442508.5_2_10:22611089-22615412:+|nuORF;ENST00000456675.2_1_10:22610576-22615415:+|nuORF;ENST00000602524.1_1_10:22614887-22615412:+|nuORF 10.823927491677226 0.5436922275383211 3 {[QN]|[E{I|L}]|[KN]}QPM 5 6 18.724 0.0 0.0 1.6769 0.0 0.0 0.0 515.284385111035 515.284385111035 3.1333450133152674 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}QPM 1.6769 - 110 1 1.159 28007.1 1.0 7461 5451 12908 HBL1_DMSO_200M_050219_1,12914 HBL1_DMSO_200M_050219_1,12914,IEQRESRSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12915 65.583 33.0 956090.0 25 0 92003.0 27618 PLFKAKMV 8 73 467.2829628712382 932.5513728092764 2 467.2833740115166 MULTI CID FTMS 0 0 0 12908 1336952.125 0.8467323203267605 -1 0.0844192504882812 7 Unmodified _PLFKAKMV_ ENSG00000091262|ENST00000205557|ABCC6;ENST00000542005.2_1_16:14916664-14918526:-|nuORF;ENST00000574094.5_1_16:16275679-16317348:-|nuORF;nc|ENSG00000091262|O95255-2|ABCC6;nc|ENSG00000091262|O95255-3|ABCC6 2.889219685676258 0.8067950007271085 3 {I|L} 1 7 10.278 0.0 0.0 1.1021 0.0 0.0 801.4564001303687 0.0 801.4564001303687 0.0 4.793036574208873 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1021 + + 26 + 1 1.159 28253.7 1.0 7462 5451 12908 HBL1_DMSO_200M_050219_1,12915 HBL1_DMSO_200M_050219_1,12915,PLFKAKMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12916 65.584 64.0 369850.0 25 0 28374.0 + -1 PLARVTLM 8 64 458.7695897848872 915.5246266365745 2 458.7697936892509 MULTI CID FTMS 0 0 0 12908 1014029.625 0.8065164666424414 -1 0.0844192504882812 8 Oxidation (M) _PLARVTLM(Oxidation (M))_ REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-5|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN 5.760428011301431 0.7893668129297577 3 {I|L} 1 -1 10.379 0.0 0.0 1.1336 0.0 0.0 784.4296539576666 0.0 784.4296539576666 0.0 7.904353461290121 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1336 + + 6 + 1 1.159 25891.4 1.0 7463 5451 12908 HBL1_DMSO_200M_050219_1,12916 HBL1_DMSO_200M_050219_1,12916,PLARVTLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12917 65.587 110.0 879250.0 25 0 95214.0 + -1 VINHNTPGLPKIY 13 104 366.7365590087173 731.4585650842347 2 366.7362853884697 MULTI CID FTMS 0 0 0 12908 965008.3125 0.0125223572435022 15 -1.1567001342773438 9 ENST00000601803.5_1_19:19035694-19035868:+|nuORF;ENSG00000105671|ENST00000247003|DDX49;ENST00000601772.1_1_19:19035054-19035967:+|nuORF 3 [{I|L}V]PK{I|L}Y 6 -1 + 47.038 0.0 0.0 6.4308 6.4308 83.474 0.0 0.0 0.0 15.740989112277248 3.899710790007624 3.899710790007624 3.899710790007624 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK{I|L}Y;[{I|L}V]PKY{I|L};[{I|L}V]Y[KP]{I|L} 6.4308;5.8976;3.0309 -;-;- 70 + 1 1.159 80559.4 1.0 7464 5451 12908 HBL1_DMSO_200M_050219_1,12917 HBL1_DMSO_200M_050219_1,12917, False False VINHNTPGLPKIY 65.586689 366.73628538847 1465032.875 12908.0 ENST00000601803.5_1_19:19035694-19035868:+|nuORF;;ENSG00000105671|ENST00000247003|DDX49;;ENST00000601772.1_1_19:19035054-19035967:+|nuORF 3.446228822072347 4.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12918 65.588 42.0 1080700.0 25 0 143300.0 + 30819 RIIDVVYNA 9 79 531.8007244008267 1061.5868958684532 2 531.7991210818291 MULTI CID FTMS 0 0 0 12908 807961.875 0.0078664321457056 15 -1.1567001342773438 10 Unmodified _RIIDVVYNA_ ENSG00000142937|ENST00000396651|RPS8 16.149105407346934 0.3995459350917656 3 VVY{[QG]|[NA]} 5 4 27.218 0.0 0.0 2.5639 0.0 0.0 497.2964344709 0.0 497.2964344709 0.0 6.456195910697602 0.0 0.0 0 0.5 0.0 0.0 0.0 + VVY{[QG]|[NA]} 2.5639 + + 48 1 1.159 41809.5 1.0 7465 5451 12908 HBL1_DMSO_200M_050219_1,12918 HBL1_DMSO_200M_050219_1,12918,RIIDVVYNA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12919 65.59 106.0 307930.0 25 0 19583.0 + 27072 PETPPGPV 8 87 397.2082539027056 792.4019548722111 2 397.2082702517509 MULTI CID FTMS 0 0 0 12908 755353.0625 0.9870748731021473 -1 0.0844192504882812 11 Unmodified _PETPPGPV_ REV__ENSG00000136367|ENST00000419474|ZFHX2 10.183394434864962 0.7604730176254005 3 [EP]AV 4 -1 25.662 0.0 0.0 3.2385 0.0 0.0 0.0 393.1676768783237 393.1676768783237 13.443350238481033 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [EP]AV 3.2385 - 48 1 1.159 32441.6 1.0 7466 5451 12908 HBL1_DMSO_200M_050219_1,12919 HBL1_DMSO_200M_050219_1,12919,PETPPGPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12920 65.594 191.0 832340.0 25 0 86669.0 + 17349 KLYDIDVAKV 10 165 388.5605197835641 1162.6597299508924 3 388.5602905154228 MULTI CID FTMS 0 0 0 12908 727152.4375 0.8899199675926539 -1 0.0844192504882812 12 Unmodified _KLYDIDVAKV_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 45.739877483867886 0.1051543674217965 3 [K{I|L}]YD{I|L}D 6 4 44.077 0.0 0.0 3.7911 0.0 0.0 0.0 412.2562933816833 412.2562933816833 26.360373136459422 0.0 0.0 0.0 0 0.9247425010840048 0.638272163982407 0.7302046884880937 0.4489700043360188 + [K{I|L}]YD{I|L}D 3.7911 + + 463 1 1.159 132705.4 1.0 7467 5451 12908 HBL1_DMSO_200M_050219_1,12920 HBL1_DMSO_200M_050219_1,12920,KLYDIDVAKV True True KLYDIDVAKV 65.5938 388.560290515423 12914939.0 12908.0 ENSG00000198242|ENST00000422514|RPL23A;;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 8.79634952545166 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12921 65.596 76.0 479220.0 25 0 78522.0 + 21531 LPISSATTI 9 77 451.7624877581691 901.5104225831382 2 451.7624694705009 MULTI CID FTMS 0 0 0 12908 744487.8125 1.0 0 0.0 13 Unmodified _LPISSATTI_ ENSG00000038219|ENST00000040738|BOD1L1;ENST00000040738.9_1_4:13602026-13602065:-|nuORF 13.50788311687929 0.4710407108020397 3 [{I|L}P]S 3 6 24.437 0.0 0.0 2.7107 0.0 0.0 0.0 601.3176179779225 601.3176179779225 7.983324797206279 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + [{I|L}P]S 2.7107 + + 57 1 1.159 38318.4 1.0 7468 5451 12908 HBL1_DMSO_200M_050219_1,12921 HBL1_DMSO_200M_050219_1,12921,LPISSATTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12922 65.601 288.0 489170.0 25 0 46479.0 + 10826 FYYGGVSSASY 11 138 600.7639946787779 1199.5134364243556 2 600.7636596560478 MULTI CID FTMS 0 0 0 12908 620497.375 0.5498909629402498 -1 0.0844192504882812 14 Unmodified _FYYGGVSSASY_ ENSG00000065328|ENST00000378714|MCM10;nc|ENSG00000065328|Q7L590|MCM10 32.30548876998284 0.3336598821591509 3 YRASY 5 7 28.906 0.0 0.0 2.4098 0.0 0.0 541.2003688159382 0.0 541.2003688159382 0.0 17.56570331650788 0.0 0.0 0 0.0 0.0 0.5629529932484498 0.6109243748081782 YRASY 2.4098 - 2375 + 1 1.159 102269.6 1.0 7469 5451 12908 HBL1_DMSO_200M_050219_1,12922 HBL1_DMSO_200M_050219_1,12922,FYYGGVSSASY False True FYYGGVSSASY 65.600835 600.763659656048 5587465.5 12908.0 ENSG00000065328|ENST00000378714|MCM10;;nc|ENSG00000065328|Q7L590|MCM10 4.386665105819702 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12923 65.607 311.0 375070.0 25 0 30766.0 -1 0 122 587.3400198018978 586.3327433352978 1 587.3403808474541 MULTI CID FTMS 0 0 0 12908 534847.625 1.0 0 0.0 15 3 {[VA]|[{I|L}G]}VEG{I|L} 6 -1 + 67.24 0.0 0.0 11.468 11.468 84.489 0.0 0.0 0.0 5.809159218443803 14.692737604564035 5.809159218443803 0.7525749891599531 0 1.4476212463643423 1.5228787452803376 0.5138793319624578 0.0 {[VA]|[{I|L}G]}VEG{I|L};{[VA]|[{I|L}G]}EVG{I|L};{NN|[MP]|[D{I|L}]|[EV]}AVG{I|L};{[VA]|[{I|L}G]}D{I|L}G{I|L};{[VA]|[{I|L}G]}EGV{I|L};{[VA]|[{I|L}G]}VAD{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{I|L}G{I|L};{NN|[MP]|[D{I|L}]|[EV]}AGV{I|L};[TP]TVG{I|L};{[VA]|[{I|L}G]}VGE{I|L} 11.468;11.339;10.477;10.305;9.7386;9.5113;9.4427;8.8762;8.8496;8.762 -;-;-;-;-;-;-;-;-;- 409 1 1.159 92881.7 1.0 7470 5451 12908 HBL1_DMSO_200M_050219_1,12923 HBL1_DMSO_200M_050219_1,12923, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12924 65.61 175.0 671040.0 25 0 80802.0 + 4309 DARLVLHV 8 120 461.7772334650137 921.5399139968274 2 461.7770568728447 MULTI CID FTMS 0 0 0 12908 494513.40625 1.0 0 0.0 16 Unmodified _DARLVLHV_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 21.59015148037692 0.5901128892327699 3 {[DA]|[EG]}R{I|L}V{I|L}HV 8 0 + 38.171 0.0 0.0 4.1421 4.1421 80.364 0.0 0.0 0.0 3.978991888276832 24.19170194836667 3.978991888276832 8.538719643217618 0 0.9489700043360187 0.8239087409443188 0.0 0.0 + + {[DA]|[EG]}R{I|L}V{I|L}HV;{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}V{I|L}HV 4.1421;3.2155 +;- + 103 1 1.159 92372.9 1.0 7471 5451 12908 HBL1_DMSO_200M_050219_1,12924 HBL1_DMSO_200M_050219_1,12924,DARLVLHV False True DARLVLHV 65.609906 461.777056872845 2589538.5 12908.0 ENSG00000132004|ENST00000393261|FBXW9;;nc|ENSG00000132004|Q5XUX1-2|FBXW9 1.0210888783137004 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12925 65.611 54.0 590950.0 25 0 40283.0 + -1 ALMGPLPHV 9 72 475.7585031270245 949.5024533208492 2 475.7579528689384 MULTI CID FTMS 0 0 0 12908 435420.375 0.8451110278407529 -1 0.0844192504882812 17 Oxidation (M) _ALM(Oxidation (M))GPLPHV_ ENST00000547315.5_2_14:105461343-105461589:+|nuORF 14.581692164780916 0.4419739649577144 3 [{I|L}A]H 3 -1 15.519 0.0 0.0 1.6345 0.0 0.0 0.0 625.2986318699303 625.2986318699303 3.736506963406317 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}A]H 1.6345 - 43 1 1.159 27468.8 1.0 7472 5451 12908 HBL1_DMSO_200M_050219_1,12925 HBL1_DMSO_200M_050219_1,12925,ALMGPLPHV False False ALMGPLPHV 65.611293 475.757952868938 9361307.0 12908.0 ENST00000547315.5_2_14:105461343-105461589:+|nuORF 4.687289555867513 2.0 True 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12926 65.615 170.0 191240.0 25 0 34888.0 + 14496 IGLGADESL 9 53 437.7296716521362 0 437.7294494509697 PEAK CID FTMS 0 0 0 12908 390054.78125 1.0 0 0.0 18 Unmodified _IGLGADESL_ REV__ENSG00000126838|ENST00000261336|PZP;REV__ENSG00000175899|ENST00000318602|A2M;REV__nc|ENSG00000126838|P20742-2|PZP 9.347437153973935 0.3197567915069932 3 G 1 -1 4.6041 0.0 0.0 0.52712 0.0 0.0 731.3336128581803 82.06698023013905 813.4005930883194 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.52712 + + 15 + 1 1.159 34954.6 1.0 7473 5451 12908 HBL1_DMSO_200M_050219_1,12926 HBL1_DMSO_200M_050219_1,12926,IGLGADESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12927 65.622 386.0 254650.0 25 0 20457.0 + 25094 MPYDSNRVVL 10 123 597.3028046018102 1192.5910562704205 2 597.3021118044853 MULTI CID FTMS 0 0 0 12908 294720.625 0.8688281442884885 -1 0.0844192504882812 19 Unmodified _MPYDSNRVVL_ ENSG00000076201|ENST00000265562|PTPN23 38.61474834105838 0.1721950110283317 3 MPYDS 5 5 54.909 0.0 0.0 4.6042 0.0 0.0 0.0 596.3554781549436 596.3554781549436 31.264100213633764 0.0 0.0 0.0 0 0.6237125054200234 1.2218487496163564 0.0 0.0 + MPYDS 4.6042 + + 324 + 1 1.159 77028.1 1.0 7474 5451 12908 HBL1_DMSO_200M_050219_1,12927 HBL1_DMSO_200M_050219_1,12927,MPYDSNRVVL False True MPYDSNRVVL 65.621556 597.302111804485 5598751.0 12908.0 ENSG00000076201|ENST00000265562|PTPN23 6.22952938079834 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12928 65.629 413.0 272260.0 25 0 23935.0 + + -1 RYMELYTHVY 10 115 687.8099901541461 0 687.8095580935478 PEAK CID FTMS 0 0 0 12908 251120.921875 1.0 0 0.0 20 2 Carbamidomethyl (C) _VHLC(Carbamidomethyl (C))DC(Carbamidomethyl (C))DKQSI_ ENSG00000055130|ENST00000325222|CUL1 10.073929032068715 0.4495801685015257 3 VHTYSSTH 8 -1 29.589 0.0 0.0 2.1541 0.0 0.0 181.0345276696849 277.1193941705688 458.1539218402537 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 VHTYSSTH 2.1541 - 375 + 1 1.159 82563.4 1.0 7475 5451 12908 HBL1_DMSO_200M_050219_1,12928 HBL1_DMSO_200M_050219_1,12928,VHLCDCDKQSI False False RYMELYTHVY 65.628943 687.809558093548 2616705.25 12908.0 ENSG00000055130|ENST00000325222|CUL1 2.524792234102885 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12930 65.637 365.0 326610.0 25 0 23342.0 -1 0 100 867.48109985799 0 867.4832031130791 PEAK CID FTMS 0 0 0 12929 143768.8125 0.7874180892822117 2 -0.1152191162109375 1 3 PGG{I|L}DAD 7 -1 26.931 0.0 0.0 1.554 0.0 0.0 245.238649577578 859.4085641559116 1104.6472137334897 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PGG{I|L}DAD 1.554 - 526 + 1 1.159 86716.7 1.0 7476 5452 12929 HBL1_DMSO_200M_050219_1,12930 HBL1_DMSO_200M_050219_1,12930, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12931 65.639 8.0 3205600.0 25 0 456620.0 + 19817 LGYDTRVTI 9 58 519.285346679813 1036.5561404264258 2 519.2854492068291 MULTI CID FTMS 0 0 0 12929 5695270.5 1.0 0 0.0 2 Unmodified _LGYDTRVTI_ ENSG00000067057|ENST00000381125|PFKP;nc|ENSG00000067057|Q01813-2|PFKP 12.240655878213236 0.5053430591993562 3 {I|L}GYD 4 5 47.652 0.0 0.0 4.5971 0.0 0.0 0.0 585.3373187975461 585.3373187975461 36.542294029923 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.0 0.0 + {I|L}GYD 4.5971 + + 12 + 1 1.159 28931.2 1.0 7477 5452 12929 HBL1_DMSO_200M_050219_1,12931 HBL1_DMSO_200M_050219_1,12931,LGYDTRVTI False True LGYDTRVTI 65.638583 519.285449206829 31638632.0 12929.0 nc|ENSG00000067057|Q01813-2|PFKP;;ENSG00000067057|ENST00000381125|PFKP 4.136711597442627 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12932 65.64 30.0 1645300.0 25 0 305700.0 + 45225 YRGADLVV 8 78 446.7477896155122 891.4810262978244 2 446.7479736208916 MULTI CID FTMS 0 0 0 12929 1752274.0 0.6086607354681526 -3 0.2025833129882812 3 Unmodified _YRGADLVV_ REV__ENSG00000143194|ENST00000367872|MAEL;REV__nc|ENSG00000143194|Q96JY0-2|MAEL;REV__nc|ENSG00000143194|Q96JY0-3|MAEL 11.640296217721598 0.738950129755968 3 VSD[KT]VV 7 -1 27.695 0.0 0.0 3.1067 0.0 0.0 145.07320266676817 0.0 145.07320266676817 0.0 16.85795196307349 0.0 0.0 0 0.5 0.0 0.0 0.0 VSD[KT]VV 3.1067 - 157 + 1 1.159 47002.9 1.0 7478 5452 12929 HBL1_DMSO_200M_050219_1,12932 HBL1_DMSO_200M_050219_1,12932,YRGADLVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12933 65.643 167.0 601080.0 25 0 27910.0 + 13130 HFHWTSQSF 9 129 588.7646531788142 1175.5147534244284 2 588.7646362185478 MULTI CID FTMS 0 0 0 12929 1355555.25 0.9987194183424052 -3 0.2025833129882812 4 Unmodified _HFHWTSQSF_ ENST00000507823.5_1_5:174919150-174919204:+|nuORF 81.86404211737425 0.017065112157077 3 {[{M(Oxidation (M))|F}H]|[RQ]}HWTSQS{M(Oxidation (M))|F} 9 0 + 61.749 0.0 0.0 5.2529 5.2529 85.227 0.0 0.0 0.0 17.86098023303616 35.1059905927697 17.86098023303616 9.208187539523747 0 0.8935078169319297 1.2218487496163564 1.424742501084005 0.3494850021680094 + + {[{M(Oxidation (M))|F}H]|[RQ]}HWTSQS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}HWTS[AG]S{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}{[WT]|[RM]}HSQS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}HWTSTC(Carbamidomethyl (C))T;[WH]T{M(Oxidation (M))|F}HSQS{M(Oxidation (M))|F};[WH]TH{M(Oxidation (M))|F}SQS{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}D{M(Oxidation (M))|F}SQS{M(Oxidation (M))|F};[WH]{[{M(Oxidation (M))|F}H]|[RQ]}TSQS{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}SQS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}{[WT]|[RM]}HS[AG]S{M(Oxidation (M))|F} 5.2529;4.4696;3.7072;3.5976;3.4946;3.2955;3.2375;3.1306;2.9663;2.9239 +;-;-;-;-;-;-;-;-;- + 1136 1 1.159 81020.4 1.0 7479 5452 12929 HBL1_DMSO_200M_050219_1,12933 HBL1_DMSO_200M_050219_1,12933,HFHWTSQSF True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12934 65.644 28.0 715440.0 25 0 64448.0 11183 GELTPARR 8 51 450.25581721466665 898.4970814961333 2 450.2554504275322 MULTI CID FTMS 0 0 0 12929 770384.375 0.9371356583533572 2 -0.1152191162109375 5 Unmodified _GELTPARR_ ENSG00000078804|ENST00000374810|TP53INP2 5.230669730166228 0.792582437072536 3 {[DA]|[EG]}{I|L} 3 5 18.416 0.0 0.0 2.0497 0.0 0.0 0.0 596.3264936877927 596.3264936877927 7.703037561203846 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + {[DA]|[EG]}{I|L} 2.0497 + + 14 1 1.159 21250.2 1.0 7480 5452 12929 HBL1_DMSO_200M_050219_1,12934 HBL1_DMSO_200M_050219_1,12934,GELTPARR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12935 65.649 247.0 276540.0 25 0 17533.0 + 19119 LDVLNTTISV 10 108 537.805547994959 1073.596543056718 2 537.8055297732353 MULTI CID FTMS 0 0 0 12929 644143.125 1.0 0 0.0 6 Unmodified _LDVLNTTISV_ REV__ENSG00000122121|ENST00000371106|XPNPEP2 16.565877749689598 0.5695826726197942 3 [VS]TPAV 6 -1 28.356 0.0 0.0 2.6412 0.0 0.0 0.0 516.2661346917367 516.2661346917367 6.102838854254252 0.0 0.0 0.0 0 0.0 0.9208187539523752 1.4489700043360187 0.0 [VS]TPAV 2.6412 - 559 1 1.159 58892.4 1.0 7481 5452 12929 HBL1_DMSO_200M_050219_1,12935 HBL1_DMSO_200M_050219_1,12935,LDVLNTTISV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12936 65.654 275.0 416270.0 25 0 51410.0 + -1 FSCMGTELEVC 11 123 674.7623885706736 1347.510224208147 2 674.7623779177666 MULTI CID FTMS 0 0 0 12929 534263.3125 0.7111649786763975 -3 0.2025833129882812 7 2 Carbamidomethyl (C),Oxidation (M) _FSC(Carbamidomethyl (C))M(Oxidation (M))GTELEVC(Carbamidomethyl (C))_ REV__ENSG00000112297|ENST00000633556|CRYBG1;REV__nc|ENSG00000112297|Q9Y4K1-1|CRYBG1;REV__nc|ENSG00000112297|Q9Y4K1-2|CRYBG1 13.042465956692816 0.7638483625850725 3 [YQ]{I|L}D 4 -1 38.605 0.0 0.0 2.8649 0.0 0.0 0.0 825.2543824590347 825.2543824590347 19.246724518334712 0.0 0.0 0.0 0 1.0 1.154901959985743 0.0 0.7134679910804405 [YQ]{I|L}D 2.8649 - 614 1 1.159 84749.4 1.0 7482 5452 12929 HBL1_DMSO_200M_050219_1,12936 HBL1_DMSO_200M_050219_1,12936,FSCMGTELEVC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12937 65.659 285.0 140800.0 25 0 6940.5 -1 0 74 607.2853266695172 1818.8341506087515 3 607.6185180544853 MULTI CID FTMS 0 0 0 12929 422318.09375 1.0 0 0.0 8 3 {I|L} 1 -1 11.42 0.0 0.0 0.62787 0.0 0.0 1687.739269482578 0.0 1687.739269482578 0.0 0.5825278453571858 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.62787 - 88 + 1 1.159 40576.1 1.0 7483 5452 12929 HBL1_DMSO_200M_050219_1,12937 HBL1_DMSO_200M_050219_1,12937, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12938 65.665 326.0 369360.0 25 0 35992.0 + 42693 SVLEKNLIKV 10 151 571.8277020029544 0 571.8288452029228 PEAK CID FTMS 0 0 0 12929 271076.90625 1.0 0 0.0 9 Unmodified _VTWLLTEIPA_ ENST00000356689.7_1_1:33290993-33299636:+|nuORF;ENST00000531123.5_1_1:33290993-33299636:+|nuORF;ENSG00000116497|ENST00000373475|S100PBP;nc|ENSG00000116497|Q96BU1-2|S100PBP 10.823927491677226 0.3685635357628707 3 W{I|L}EK 4 7 13.047 0.0 0.0 1.1428 0.0 0.0 245.1062228312717 337.18857752017817 582.2948003514499 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 W{I|L}EK 1.1428 - 841 + 1 1.159 93650.0 1.0 7484 5452 12929 HBL1_DMSO_200M_050219_1,12938 HBL1_DMSO_200M_050219_1,12938,VTWLLTEIPA False True SVLEKNLIKV 65.665089 571.828845202923 1291793.0 12929.0 ENST00000356689.7_1_1:33290993-33299636:+|nuORF;;ENST00000531123.5_1_1:33290993-33299636:+|nuORF;;ENSG00000116497|ENST00000373475|S100PBP;;nc|ENSG00000116497|Q96BU1-2|S100PBP 5.382776419321696 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12939 65.671 330.0 131760.0 25 0 8335.7 + 31132 RLMNETTAVAL 11 80 609.8290506768648 0 609.8296996951103 PEAK CID FTMS 0 0 0 12929 268737.5 1.0 0 0.0 10 Unmodified _RLMNETTAVAL_ ENSG00000164070|ENST00000296464|HSPA4L;ENSG00000170606|ENST00000304858|HSPA4 23.78978130925829 0.3054658308107615 3 A 1 10 8.9794 0.0 0.0 0.73744 0.0 0.0 1015.511069638106 128.07227502994377 1143.58334466805 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + A 0.73744 + + 20 + 1 1.159 37171.0 1.0 7485 5452 12929 HBL1_DMSO_200M_050219_1,12939 HBL1_DMSO_200M_050219_1,12939,RLMNETTAVAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12940 65.678 355.0 140110.0 25 0 33931.0 -1 0 79 946.436456156109 1890.8583593790177 2 947.4437744021416 MULTI CID FTMS 0 0 0 12929 217643.078125 1.0 0 0.0 11 3 TSSP 4 -1 22.083 0.0 0.0 1.1679 0.0 0.0 1162.498021099524 353.18332849674067 1515.681349596265 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 TSSP 1.1679 - 314 + 1 1.159 41088.5 1.0 7486 5452 12929 HBL1_DMSO_200M_050219_1,12940 HBL1_DMSO_200M_050219_1,12940, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12942 65.682 1.3 25785000.0 25 0 2099100.0 -1 SICMCSVSL 9 65 528.7275538496189 1055.4405547660376 2 528.7289306521416 MULTI CID FTMS 0 0 0 12941 22135144.0 0.2034330414357002 3 -0.2360687255859375 1 2 Carbamidomethyl (C) _SIC(Carbamidomethyl (C))MC(Carbamidomethyl (C))SVSL_ ENST00000325722.7_1_1:35899174-35899423:-|nuORF 21.74664581756881 0.2544899275067181 3 S{I|L} 2 -1 25.093 0.0 0.0 2.3775 0.0 0.0 837.3135386300986 0.0 837.3135386300986 0.0 3.1552798240840296 0.0 0.0 0 0.4247425010840047 0.0 0.2887254899964357 0.0 S{I|L} 2.3775 + + 28 + 1 1.159 35906.7 1.0 7487 5453 12941 HBL1_DMSO_200M_050219_1,12942 HBL1_DMSO_200M_050219_1,12942,SICMCSVSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12943 65.683 9.3 11615000.0 25 0 1169500.0 + 44603 YPFKPPKI 8 77 495.29454849115496 988.57454404911 2 495.2949096560478 MULTI CID FTMS 0 0 0 12941 3930782.25 0.3991794027453812 1 -0.0664596557617187 2 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 57.47134341890925 0.1146309765603773 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 81.011 0.0 0.0 8.1948 8.1948 96.806 0.0 0.0 0.0 22.37334396171555 15.260847058321689 15.260847058321689 25.568109453757657 0 1.4916440611282624 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKP{I|L}Y;[KP]PK{M(Oxidation (M))|F}PY{I|L};[KP]PK{M(Oxidation (M))|F}P{I|L}Y;[KP]P{M(Oxidation (M))|F}KPY{I|L};[KP]PK{I|L}MY{I|L};[KP]P{M(Oxidation (M))|F}KP{I|L}Y;[KP]PK{I|L}M{I|L}Y 8.1948;5.6084;4.8917;4.7608;3.6039;3.4731;3.2994;3.2014;3.1686;3.0705 +;-;-;-;-;-;-;-;-;- + 327 + 1 1.159 85833.5 1.0 7488 5453 12941 HBL1_DMSO_200M_050219_1,12943 HBL1_DMSO_200M_050219_1,12943,YPFKPPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12944 65.684 9.9 6828500.0 25 0 766370.0 + 3592 DAALDFKNV 9 98 496.75636772746 991.49818252172 2 496.7564880251884 MULTI CID FTMS 0 0 0 12941 3950838.75 0.5273039056115514 1 -0.0664596557617187 3 Unmodified _DAALDFKNV_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 60.07390631473393 0.0260411565414776 3 {[DA]|[EG]}A{I|L}D{M(Oxidation (M))|F}KNV 9 0 + 81.865 0.0 0.0 8.2567 8.2567 94.935 0.0 0.0 0.0 31.29954559799072 10.146966633240126 10.146966633240126 11.423329158756658 0 1.2887254899964358 1.6989700043360187 0.3252574989159953 1.2571810378154735 + + {[DA]|[EG]}A{I|L}D{M(Oxidation (M))|F}KNV;{[DA]|[EG]}A{I|L}D{M(Oxidation (M))|F}KGGV;{[DA]|[EG]}A{I|L}V[YQ]NV;{[DA]|[EG]}A{I|L}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M{I|L};{[DA]|[EG]}A{I|L}V[YQ]GGV;W[W{I|L}]{M(Oxidation (M))|F}KNV;[R{M(Oxidation (M))|F}]A{I|L}N{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;[R{M(Oxidation (M))|F}]A{I|L}NQM{I|L};[R{M(Oxidation (M))|F}]A{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}NV;{[DA]|[EG]}A{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}A]{[QG]|[NA]} 8.2567;7.1045;5.4573;4.7051;4.3052;3.7358;3.5489;3.4858;3.1202;3.0438 +;-;-;-;-;-;-;-;-;- + 579 + 1 1.159 58806.3 1.0 7489 5453 12941 HBL1_DMSO_200M_050219_1,12944 HBL1_DMSO_200M_050219_1,12944,DAALDFKNV True True DAALDFKNV 65.684168 496.756488025188 44901036.0 12941.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 8.223167419433594 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12945 65.685 12.0 6090400.0 25 0 1375300.0 + 37818 TLTEEGVIKV 10 82 544.8132146657598 1087.6118763983195 2 544.8137084841728 MULTI CID FTMS 0 0 0 12941 3845607.25 0.4642246731641017 -2 0.1060409545898437 4 Unmodified _TLTEEGVIKV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 30.43146612281011 0.2849569935312043 3 [{I|L}T]TEE[VG]{I|L}KV 10 0 + 66.499 0.0 0.0 6.1142 6.1142 92.496 0.0 0.0 0.0 38.81035498869159 2.0630238535714938 2.0630238535714938 62.538120562540605 0 0.805462187404089 2.0 0.4247425010840047 0.2215141619232908 + + [{I|L}T]TEE[VG]{I|L}KV;{[DS]|[MA]|[CV]|TT}{I|L}[DG]{I|L}[RV][{I|L}T];{[DS]|[MA]|[CV]|TT}{I|L}ER[RV][{I|L}T] 6.1142;0.36418;0.26503 +;-;- + 577 + 1 1.159 62312.7 1.0 7490 5453 12941 HBL1_DMSO_200M_050219_1,12945 HBL1_DMSO_200M_050219_1,12945,TLTEEGVIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12946 65.687 15.0 2748300.0 25 0 286630.0 + 41400 VPLDGRPMNI 10 65 556.2996133434849 1110.5846737537695 2 556.3002197146416 MULTI CID FTMS 0 0 0 12941 2723078.75 0.2361054897144047 4 -0.329345703125 5 Unmodified _VPLDGRPMNI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 24.99096001346401 0.4071966087057876 3 VP{I|L}DM 5 5 54.297 0.0 0.0 4.889 0.0 0.0 0.0 552.2733248346311 552.2733248346311 28.610469015915783 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 VP{I|L}DM 4.889 - 58 + 1 1.159 41589.3 1.0 7491 5453 12941 HBL1_DMSO_200M_050219_1,12946 HBL1_DMSO_200M_050219_1,12946,VPLDGRPMNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12947 65.688 15.0 3247400.0 25 0 384620.0 + 39120 TYGERVVAF 9 80 521.2717946458087 1040.5290363584172 2 521.2724487185478 MULTI CID FTMS 0 0 0 12941 2192785.0 0.0137535994936473 12 -0.9841079711914062 6 Unmodified _TYGERVVAF_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;ENST00000462343.1_1_2:10266966-10267371:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 23.78978130925829 0.2284941198415988 3 [YT]W 3 7 30.942 0.0 0.0 2.9737 0.0 0.0 0.0 587.3331392877561 587.3331392877561 1.173005843163608 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [YT]W 2.9737 - 48 + 1 1.159 44467.9 1.0 7492 5453 12941 HBL1_DMSO_200M_050219_1,12947 HBL1_DMSO_200M_050219_1,12947,TYGERVVAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12948 65.689 51.0 1541400.0 25 0 156730.0 + 30030 QTPQRLLEV 9 92 542.3114583359417 1082.6083637386832 2 542.3118774294853 MULTI CID FTMS 0 0 0 12941 1351640.375 0.1566547689787853 -3 0.190460205078125 7 Unmodified _QTPQRLLEV_ ENSG00000133119|ENST00000380071|RFC3;nc|ENSG00000133119|P40938-2|RFC3 82.5293158979368 0.0169039238599547 3 [NP]VV[WK]{I|L}EV 9 6 + 42.654 0.0 0.0 3.9399 3.9399 69.718 0.0 0.0 0.0 8.653014261025433 8.95119965945284 8.653014261025433 0.4575749056067479 0 0.0 2.0 0.5 1.2302046884880935 [NP]VV[WK]{I|L}EV;[NP]VVT{[NV]|[RG]}{I|L}EV;[PS][KP][WK]{I|L}EV;[PS][KP]T{[NV]|[RG]}{I|L}EV;[PS][KP]VV{M(Oxidation (M))|F}V[NP];[NP]VVVV{M(Oxidation (M))|F}V[NP];[VG][RP]T{[NV]|[RG]}{I|L}EV;[VG][RP]T[KT]PEV;{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}[RV]PEV;[QP][{I|L}A][WK]{I|L}EV 3.9399;3.8977;3.1407;3.0984;2.6117;2.5974;2.2642;1.7988;1.7268;1.6096 -;-;-;-;-;-;-;-;-;- 241 1 1.159 68350.7 1.0 7493 5453 12941 HBL1_DMSO_200M_050219_1,12948 HBL1_DMSO_200M_050219_1,12948,QTPQRLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12949 65.691 64.0 1118000.0 25 0 134560.0 + 20542 LLLSSYAT 8 88 434.24326329186215 866.4719736505243 2 434.2433654665947 MULTI CID FTMS 0 0 0 12941 1287749.625 0.5076432308746515 3 -0.2360687255859375 8 Unmodified _LLLSSYAT_ REV__ENSG00000178795|ENST00000315938|GDPD4;REV__nc|ENSG00000178795|Q6W3E5|GDPD4 6.354104778181461 0.7857632046190106 3 {I|L}{I|L}W{I|L} 4 -1 19.041 0.0 0.0 2.1975 0.0 0.0 0.0 338.11965366444934 338.11965366444934 9.708763303940088 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}W{I|L} 2.1975 - 27 1 1.159 60446.9 1.0 7494 5453 12941 HBL1_DMSO_200M_050219_1,12949 HBL1_DMSO_200M_050219_1,12949,LLLSSYAT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12950 65.692 32.0 1356300.0 25 0 250300.0 + 20047 LIPQRYAP 8 68 479.2774038569007 956.5402547806012 2 479.2772094607353 MULTI CID FTMS 0 0 0 12941 1258147.625 0.4785964485501189 3 -0.2360687255859375 9 Unmodified _LIPQRYAP_ REV__ENSG00000117394|ENST00000426263|SLC2A1 2.889219685676258 0.8067950007271085 3 {I|L} 1 -1 9.2082 0.0 0.0 0.96266 0.0 0.0 825.445373654428 0.0 825.445373654428 0.0 9.208187539523747 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.96266 + + 6 + 1 1.159 38239.4 1.0 7495 5453 12941 HBL1_DMSO_200M_050219_1,12950 HBL1_DMSO_200M_050219_1,12950,LIPQRYAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12951 65.693 48.0 857080.0 25 0 91298.0 + 26222 NQIPTVNNL 9 78 506.7754190522648 0 506.7749511599541 PEAK CID FTMS 0 0 0 12941 975599.25 0.343526487317486 1 -0.0664596557617187 10 Unmodified _NQIPTVNNL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 56.17704186161178 0.0208571546621878 3 {I|L}Q 2 8 13.94 0.0 0.0 1.3781 0.0 0.0 656.3505960397553 111.0204332941039 767.3710293338592 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 {I|L}Q 1.3781 - 78 + 1 1.159 42734.8 1.0 7496 5453 12941 HBL1_DMSO_200M_050219_1,12951 HBL1_DMSO_200M_050219_1,12951,NQIPTVNNL True True NQIPTVNNL 65.693064 506.774951159954 63070746.0 12941.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 5.283088525136312 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12952 65.696 130.0 697180.0 25 0 43000.0 + 41064 VMPEAVPEV 9 114 485.7494744952114 969.4843960572229 2 485.7492858767509 MULTI CID FTMS 0 0 0 12941 742385.125 0.3798639058098749 1 -0.0664596557617187 11 Unmodified _VMPEAVPEV_ ENSG00000101191|ENST00000395343|DIDO1;nc|ENSG00000101191|Q9BTC0-1|DIDO1 34.10243960390752 0.1078313939113124 3 [EP]AVMV 6 4 45.138 0.0 0.0 4.6559 0.0 0.0 0.0 340.1496541961479 340.1496541961479 27.861692199550035 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 [EP]AVMV 4.6559 - 537 1 1.159 73302.9 1.0 7497 5453 12941 HBL1_DMSO_200M_050219_1,12952 HBL1_DMSO_200M_050219_1,12952,VMPEAVPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12953 65.697 42.0 1538300.0 25 0 116510.0 + 2280 AQHDPLLTGV 10 105 525.7825347971391 1049.550516661078 2 525.7832519412041 MULTI CID FTMS 0 0 0 12941 650716.6875 0.2648119133818253 1 -0.0664596557617187 12 Unmodified _AQHDPLLTGV_ ENSG00000174021|ENST00000370645|GNG5;nc|ENSG00000133136|A0A804HLA8|GNG5B 22.65808497894818 0.4596126414678359 3 [{I|L}P]Y[C(Carbamidomethyl (C))K]{I|L}TGV 9 6 [{I|L}P]Y[C(Carbamidomethyl (C))K]{I|L} + + 30.234 17.113 2.2098 2.8806 2.8806 49.981 0.0 0.0 0.0 0.0 12.953715727355966 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 [{I|L}P]Y[C(Carbamidomethyl (C))K]{I|L}TGV 2.8806 - 420 + 1 1.159 57992.7 1.0 7498 5453 12941 HBL1_DMSO_200M_050219_1,12953 HBL1_DMSO_200M_050219_1,12953,AQHDPLLTGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12954 65.7 131.0 838930.0 25 0 98261.0 + 37007 TFPNGVKGL 9 119 466.7632680151626 931.5119830971252 2 466.7638122439384 MULTI CID FTMS 0 0 0 12941 517536.25 0.3731685714205884 3 -0.2360687255859375 13 Unmodified _TFPNGVKGL_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 19.256988751693697 0.3154191944385105 3 [{M(Oxidation (M))|F}T]PNGVKAV 9 2 + 35.415 0.0 0.0 3.8019 3.8019 69.874 0.0 0.0 0.0 2.557401298674307 0.6694678963061307 0.6694678963061307 0.6694678963061307 0 0.4247425010840047 0.0 0.0 0.4247425010840047 [{M(Oxidation (M))|F}T]PNGVKAV;[{M(Oxidation (M))|F}T]PNGVKG{I|L};[{M(Oxidation (M))|F}T]PGGGVKAV;[{M(Oxidation (M))|F}T]PGGGVKG{I|L} 3.8019;3.7301;2.8134;2.7415 -;+;-;- + 279 + 1 1.159 86547.3 1.0 7499 5453 12941 HBL1_DMSO_200M_050219_1,12954 HBL1_DMSO_200M_050219_1,12954,TFPNGVKGL False True TFPNGVKGL 65.699572 466.7626 55765764.0 12941.0 ENSG00000242612|ENST00000219481|DECR2;;ENST00000439661.5_1_16:457533-461575:+|nuORF;;nc|ENSG00000242612|Q9NUI1-3|DECR2 6.322313149770101 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12955 65.705 313.0 406920.0 25 0 41275.0 + 4199 DAPKAGQLEAW 11 128 593.2983737722826 1184.5821946113651 2 593.2986938357353 MULTI CID FTMS 0 0 0 12941 513676.15625 0.2079194206036378 3 -0.2360687255859375 14 Unmodified _DAPKAGQLEAW_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 39.21299971606389 0.2245192836502623 3 K{I|L}EADAW 7 8 72.3 0.0 0.0 6.1034 0.0 0.0 353.18208510566564 0.0 353.18208510566564 0.0 43.85274404843592 0.0 0.0 0 0.5 0.0 1.055462187404089 1.4049471895720984 K{I|L}EADAW 6.1034 - 1771 1 1.159 97327.9 1.0 7500 5453 12941 HBL1_DMSO_200M_050219_1,12955 HBL1_DMSO_200M_050219_1,12955,DAPKAGQLEAW False True DAPKAGQLEAW 65.705278 593.298693835735 36085904.0 12941.0 nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4 4.205618381500244 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12956 65.711 325.0 944740.0 25 0 235320.0 + 31103 RLLGEEVVRV 10 162 585.3535198993893 1168.6924868655783 2 585.3535034060478 MULTI CID FTMS 0 0 0 12941 443625.4375 0.4003995078328852 1 -0.0664596557617187 15 Unmodified _RLLGEEVVRV_ ENSG00000100726|ENST00000262319|TELO2 55.24861242081279 0.0493457817857391 3 VG{I|L}{I|L}WEVVVR 10 5 + 99.865 0.0 0.0 8.545 8.545 82.745 0.0 0.0 0.0 34.3013753297071 0.5115252244738144 0.5115252244738144 0.5115252244738144 0 2.473197507588033 2.0 0.0 1.274227503252014 VG{I|L}{I|L}WEVVVR;VG{I|L}{I|L}WEVVRV;VG{I|L}{I|L}{[DA]|[EG]}EVVVR;VG{I|L}{I|L}{[DA]|[EG]}EVVRV;VGV{I|L}{[CP]|[EA]}EVVVR;VGV{I|L}{[CP]|[EA]}EVVRV;VG{I|L}V{[CP]|[EA]}EVVVR;VG{I|L}V{[CP]|[EA]}EVVRV;VR{I|L}{[CP]|[EA]}EVVVR;VR{I|L}{[CP]|[EA]}EVVRV 8.545;8.5012;7.7608;7.717;7.417;7.3732;7.2042;7.1604;5.1015;5.0578 -;-;-;-;-;-;-;-;-;- 1820 + 1 1.159 231140.2 1.0 7501 5453 12941 HBL1_DMSO_200M_050219_1,12956 HBL1_DMSO_200M_050219_1,12956,RLLGEEVVRV True True RLLGEEVVRV 65.711189 585.353503406048 4959641.5 12941.0 ENSG00000100726|ENST00000262319|TELO2 6.590668201446533 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12957 65.714 128.0 1006500.0 25 0 118100.0 + 29799 HQDPQSIFV 9 137 535.76056334272 1069.50657375224 2 535.7665283083916 MULTI CID FTMS 0 0 0 12941 454793.8125 0.0401780839616765 -11 0.8779830932617188 16 Unmodified _QQEGYSIFV_ nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;ENSG00000131503|ENST00000360839|ANKHD1 19.256988751693697 0.3154191944385105 3 [HQ]DPQS{I|L}[{M(Oxidation (M))|F}V] 9 4 + 39.878 0.0 0.0 3.7286 3.7286 68.528 0.0 0.0 0.0 0.0542597980834429 7.147642715192511 0.0542597980834429 0.0542597980834429 0 0.0 0.0 1.274227503252014 0.1271595765414318 [HQ]DPQS{I|L}[{M(Oxidation (M))|F}V];[AG]HDPQS{I|L}[{M(Oxidation (M))|F}V];[AG]DHPQS{I|L}[{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}HPQS{I|L}[{M(Oxidation (M))|F}V];[HQ]DP[AG]S{I|L}[{M(Oxidation (M))|F}V];[AG]HDP[AG]S{I|L}[{M(Oxidation (M))|F}V];[AG]DHP[AG]S{I|L}[{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}HP[AG]S{I|L}[{M(Oxidation (M))|F}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}M[WD]{M(Oxidation (M))|F}V;[AG]V{[{M(Oxidation (M))|F}C]|[YS]}QS{I|L}[{M(Oxidation (M))|F}V] 3.7286;3.7235;3.3127;3.1989;2.8676;2.8666;2.4558;2.3379;1.8459;1.7604 -;-;-;-;-;-;-;-;-;- 919 1 1.159 101444.5 1.0 7502 5453 12941 HBL1_DMSO_200M_050219_1,12957 HBL1_DMSO_200M_050219_1,12957,QQEGYSIFV False False HQDPQSIFV 65.713814 535.766528308392 18676004.0 12941.0 nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;;ENSG00000131503|ENST00000360839|ANKHD1 7.066561698913574 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12958 65.721 431.0 465180.0 25 0 30783.0 + + 2995 AVLPRLHQL 9 176 349.55396087683255 1045.6400532306975 3 349.5538207888603 MULTI CID FTMS 0 0 0 12941 417573.53125 0.0161644140957515 13 -1.0506591796875 17 Unmodified _AVIISTLTTK_ ENST00000463906.1_1_1:43630116-43636618:-|nuORF;ENSG00000117395|ENST00000236051|EBNA1BP2 43.77239144664712 0.1177314611616471 3 AV{I|L}{I|L}E 5 -1 58.8 0.0 0.0 5.6234 0.0 0.0 0.0 517.3015230768186 517.3015230768186 31.844924275137743 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.6549471895720985 0.0 AV{I|L}{I|L}E 5.6234 - 387 + 1 1.159 171156.8 1.0 7503 5453 12941 HBL1_DMSO_200M_050219_1,12958 HBL1_DMSO_200M_050219_1,12958,AVIISTLTTK False False AVLPRLHQL 65.721483 349.55382078886 834511456.0 12941.0 ENST00000463906.1_1_1:43630116-43636618:-|nuORF;;ENSG00000117395|ENST00000236051|EBNA1BP2 6.078202883402507 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12959 65.729 425.0 512080.0 25 0 87476.0 -1 0 158 426.2251638737677 425.2178874071677 1 426.2252685427666 MULTI CID FTMS 0 0 0 12941 369441.5 0.5303142501818086 3 -0.2360687255859375 18 3 V 1 -1 12.764 0.0 0.0 3.0018 0.0 0.0 308.1385092106818 0.0 308.1385092106818 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 V 3.0018 - 32 + 1 1.159 171937.4 1.0 7504 5453 12941 HBL1_DMSO_200M_050219_1,12959 HBL1_DMSO_200M_050219_1,12959, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12960 65.737 419.0 226960.0 25 0 17989.0 + -1 SYLCFYNEV 9 132 597.7614714239638 1193.5083899147276 2 597.7615234255791 MULTI CID FTMS 0 0 0 12941 201906.84375 0.6393665569425444 1 -0.0664596557617187 19 Carbamidomethyl (C) _SYLC(Carbamidomethyl (C))FYNEV_ REV__ENST00000393229.3_1_9:135117391-135118432:+|nuORF 19.256988751693697 0.3154191944385105 3 YS{I|L} 3 -1 43.984 0.0 0.0 3.6853 0.0 0.0 0.0 827.3042696588499 827.3042696588499 23.97431564063559 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 YS{I|L} 3.6853 - 581 + 1 1.159 79481.3 1.0 7505 5453 12941 HBL1_DMSO_200M_050219_1,12960 HBL1_DMSO_200M_050219_1,12960,SYLCFYNEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12961 65.744 417.0 282320.0 25 0 21768.0 -1 0 131 573.3602998908575 572.3530234242575 1 573.3604003787041 MULTI CID FTMS 0 0 0 12941 203608.875 0.7081777640874788 -2 0.1060409545898437 20 3 {I|L}T{I|L}QV 5 -1 + 63.795 0.0 0.0 11.146 11.146 87.065 0.0 0.0 0.0 10.762495684687728 2.3147789609185097 2.3147789609185097 2.3147789609185097 0 1.113982988912431 1.3010299956639813 0.2887254899964357 0.9802046884880936 {I|L}T{I|L}QV;{I|L}T{I|L}N{I|L};[{I|L}T]{I|L}QV;[{I|L}T]Q{I|L}V;{I|L}T{I|L}[AG]V;[Q{I|L}]T{I|L}V;[{I|L}T]{I|L}N{I|L};[{I|L}T]{I|L}[AG]V;[{I|L}T]QV{I|L};{I|L}T{I|L}GG{I|L} 11.146;10.742;9.2656;9.0773;7.7662;7.6777;7.6488;7.5984;7.4604;7.3618 -;-;-;-;-;-;-;-;-;- 295 + 1 1.159 91219.0 1.0 7506 5453 12941 HBL1_DMSO_200M_050219_1,12961 HBL1_DMSO_200M_050219_1,12961, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12963 65.748 15.0 2989400.0 25 0 310450.0 + 35109 SQWDSPMRV 9 58 553.2578917812924 1104.5012306293847 2 553.2584716677666 MULTI CID FTMS 0 0 0 12962 3502681.75 0.7133421251624921 2 -0.1696090698242187 1 Unmodified _SQWDSPMRV_ ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B 32.78568957990786 0.1150597335874693 3 {[QS]|[NT]}WDS{NN|[MP]|[D{I|L}]|[EV]}[RV] 9 0 + 38.688 0.0 0.0 3.5028 3.5028 80.403 0.0 0.0 0.0 38.68825918141796 7.66257482205355 7.66257482205355 9.208187539523756 0 0.5 0.0 0.3807196863200844 0.6747425010840047 + + {[QS]|[NT]}WDS{NN|[MP]|[D{I|L}]|[EV]}[RV];{[QS]|[NT]}{[DA]|[EG]}DS{NN|[MP]|[D{I|L}]|[EV]}[RV];{[QS]|[NT]}WD[WE][RV];{[QS]|[NT]}V{[C(Carbamidomethyl (C))E]|[WC]}{NN|[MP]|[D{I|L}]|[EV]}[RV] 3.5028;2.6691;2.6218;2.0777 +;-;-;- + 37 + 1 1.16 41212.7 1.0 7507 5454 12962 HBL1_DMSO_200M_050219_1,12963 HBL1_DMSO_200M_050219_1,12963,SQWDSPMRV True True SQWDSPMRV 65.74827 553.258471667767 65668920.0 12962.0 ENSG00000132549|ENST00000357162|VPS13B;;nc|ENSG00000132549|Q7Z7G8|VPS13B;;nc|ENSG00000132549|Q7Z7G8-6|VPS13B 6.792482852935791 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12964 65.749 26.0 1673400.0 25 0 255190.0 + 11386 GGIDRVYEI 9 67 511.2691144850707 1020.5236760369414 2 511.2696716189384 MULTI CID FTMS 0 0 0 12962 2137847.0 0.4690288280307124 2 -0.1696090698242187 2 Unmodified _GGIDRVYEI_ ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1 15.248480904072842 0.4239247793462406 3 [YV][HV]VYE{I|L} 8 5 + 45.679 0.0 0.0 4.4761 4.4761 85.234 0.0 0.0 0.0 8.696662315049934 34.710084362531575 8.696662315049934 17.501225267834002 0 0.805462187404089 1.3010299956639813 0.0 0.0 [YV][HV]VYE{I|L};[YV][HV]E[YV]{I|L};[C(Carbamidomethyl (C))K][{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M{I|L} 4.4761;2.7611;1.3819 -;-;- 102 1 1.16 39701.6 1.0 7508 5454 12962 HBL1_DMSO_200M_050219_1,12964 HBL1_DMSO_200M_050219_1,12964,GGIDRVYEI False True GGIDRVYEI 65.749447 511.269671618938 23177102.0 12962.0 chr16:75631855-75635680|25|13.4|0.73|4.2|-|0|KARS1,KARS1|1;;nc|ENSG00000065427|Q15046-2|KARS1;;ENSG00000065427|ENST00000302445|KARS1 1.5592374006907146 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12965 65.751 2.7 20790000.0 25 0 1359800.0 + 8652 EVEWLAPIV 9 66 528.290055908094 1054.565558882988 2 528.2910644412041 MULTI CID FTMS 0 0 0 12962 18038028.0 0.531382823405365 2 -0.1696090698242187 3 Unmodified _EVEWLAPIV_ REV__ENST00000415912.6_1_1:21545281-21545563:-|nuORF;REV__ENST00000443892.2_1_1:2481410-2485587:-|nuORF;REV__nc|ENSG00000138835|P49796|RGS3 28.486842064014134 0.1687311288560894 3 A{I|L}EEV 5 -1 44.068 0.0 0.0 4.1788 0.0 0.0 495.2819081037125 0.0 495.2819081037125 0.0 16.620768972555595 0.0 0.0 0 0.6109243748081782 0.0 0.0 0.0 A{I|L}EEV 4.1788 - 109 1 1.16 53507.4 1.0 7509 5454 12962 HBL1_DMSO_200M_050219_1,12965 HBL1_DMSO_200M_050219_1,12965,EVEWLAPIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12966 65.752 38.0 1422400.0 25 0 280640.0 + 14131 IAYDNIKVV 9 76 517.7981052258892 1033.5816575185784 2 517.7982055544853 MULTI CID FTMS 0 0 0 12962 1465254.625 0.5808110677406303 -1 0.0664596557617187 4 Unmodified _IAYDNIKVV_ ENSG00000105849|ENST00000222567|POLR1F 39.94969957227396 0.0757326808254658 3 {I|L}AYDN{I|L}KVV 9 0 + 55.103 0.0 0.0 5.3313 5.3313 89.816 0.0 0.0 0.0 31.392842686562688 9.163457423679128 9.163457423679128 55.10299258132939 0 0.8182503180159344 2.0 0.0 0.0 + + {I|L}AYDN{I|L}KVV 5.3313 + + 176 + 1 1.16 43053.3 1.0 7510 5454 12962 HBL1_DMSO_200M_050219_1,12966 HBL1_DMSO_200M_050219_1,12966,IAYDNIKVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12967 65.753 26.0 2296200.0 25 0 204730.0 2586 ASLKRAWP 8 88 464.7702133278089 927.5258737224176 2 464.7700683474541 MULTI CID FTMS 0 0 0 12962 1026566.0 0.4422784557353074 2 -0.1696090698242187 5 Unmodified _ASLKRAWP_ ENST00000602415.2_1_16:67697876-67700142:-|nuORF 9.347437153973935 0.7675937258251505 3 {[SA]|[TG]}{I|L}VR{I|L}{I|L} 7 4 22.668 0.0 0.0 2.444 0.0 0.0 0.0 172.01150332453713 172.01150332453713 9.904222396819868 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[SA]|[TG]}{I|L}VR{I|L}{I|L} 2.444 - 94 1 1.16 53019.7 1.0 7511 5454 12962 HBL1_DMSO_200M_050219_1,12967 HBL1_DMSO_200M_050219_1,12967,ASLKRAWP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12968 65.754 43.0 1024500.0 25 0 107530.0 + 35328 SSWSPLDRL 9 88 530.775573055867 1059.5365931785338 2 530.7756835818291 MULTI CID FTMS 0 0 0 12962 908470.0625 0.8226826677756873 -1 0.0664596557617187 6 Unmodified _SSWSPLDRL_ REV__ENSG00000151876|ENST00000281623|FBXO4;REV__nc|ENSG00000151876|Q9UKT5-2|FBXO4 10.073929032068715 0.563993802247229 3 {I|L}PVER{I|L} 6 -1 36.987 0.0 0.0 3.4909 0.0 0.0 334.0913628879436 0.0 334.0913628879436 0.0 25.393360514661367 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.0 {I|L}PVER{I|L} 3.4909 - 131 + 1 1.16 41370.3 1.0 7512 5454 12962 HBL1_DMSO_200M_050219_1,12968 HBL1_DMSO_200M_050219_1,12968,SSWSPLDRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12969 65.756 57.0 818050.0 25 0 83709.0 + 16459 KAINVFVSA 9 84 474.7789198568965 947.5432867805928 2 474.7793456912041 MULTI CID FTMS 0 0 0 12962 782136.9375 0.864753545545986 -1 0.0664596557617187 7 Unmodified _KAINVFVSA_ ENSG00000114209|ENST00000392750|PDCD10 39.957323273325 0.0756908302845263 3 NV{M(Oxidation (M))|F}VSA 6 3 40.208 0.0 0.0 4.2434 0.0 0.0 312.216600486525 0.0 312.216600486525 0.0 22.24932183384788 0.0 0.0 0 0.718765315847925 0.0 0.0 0.7614393726401688 + NV{M(Oxidation (M))|F}VSA 4.2434 + + 98 1 1.16 45082.9 1.0 7513 5454 12962 HBL1_DMSO_200M_050219_1,12969 HBL1_DMSO_200M_050219_1,12969,KAINVFVSA True True KAINVFVSA 65.755628 474.779345691204 6858779.0 12962.0 ENSG00000114209|ENST00000392750|PDCD10 6.083350499471028 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12970 65.758 124.0 987930.0 25 0 204610.0 + 29303 QIKELKVI 8 115 324.2158569364571 0 324.2156555056572 PEAK CID FTMS 0 0 0 12962 620759.75 0.4408796431683106 -1 0.0664596557617187 8 Unmodified _QIKELKVI_ REV__ENSG00000155324|ENST00000285689|GRAMD2B;REV__nc|ENSG00000155324|Q96HH9-2|GRAMD2B;REV__nc|ENSG00000155324|Q96HH9-3|GRAMD2B;REV__nc|ENSG00000155324|Q96HH9-4|GRAMD2B;REV__nc|ENSG00000155324|Q96HH9-5|GRAMD2B 5.760428011301431 0.5786759180849727 3 {I|L}R 2 -1 13.073 0.0 0.0 2.0224 0.0 0.0 147.06803002939546 227.1409853570922 374.2090153864877 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3252574989159953 {I|L}R 2.0224 - 14 + 1 1.16 100250.9 1.0 7514 5454 12962 HBL1_DMSO_200M_050219_1,12970 HBL1_DMSO_200M_050219_1,12970,QIKELKVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12971 65.759 39.0 1510300.0 25 0 108710.0 + 27760 PLPLDQPDL 9 88 504.27381369431583 1006.5330744554316 2 504.2759277224541 MULTI CID FTMS 0 0 0 12962 566865.0625 0.4697502956319397 2 -0.1696090698242187 9 Unmodified _PLPLDQPDL_ REV__ENSG00000186260|ENST00000571589|MRTFB;REV__nc|ENSG00000186260|Q9ULH7-4|MRTFB;REV__nc|ENSG00000186260|Q9ULH7|MRTFB 21.74664581756881 0.2544899275067181 3 {I|L}PS{I|L}HV 6 -1 24.614 0.0 0.0 2.4454 0.0 0.0 342.1297344900768 0.0 342.1297344900768 0.0 -2.2083186039940017 -2.2083186039940017 0.0 0 0.0 0.0 0.0 0.0 {I|L}PS{I|L}HV 2.4454 - 216 + 1 1.16 50656.9 1.0 7515 5454 12962 HBL1_DMSO_200M_050219_1,12971 HBL1_DMSO_200M_050219_1,12971,PLPLDQPDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12972 65.763 210.0 311220.0 25 0 23894.0 + 12742 GVNNISGIEEV 11 112 565.7872807846934 1129.5600086361867 2 565.7877075076103 MULTI CID FTMS 0 0 0 12962 437018.03125 0.8400436944058666 -1 0.0664596557617187 10 Unmodified _GVNNISGIEEV_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 60.07390631473393 0.0688452368411198 3 [VG]NN{I|L} 5 6 26.048 0.0 0.0 2.306 0.0 0.0 0.0 629.2781537380023 629.2781537380023 3.193087928344557 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.7742275032520141 + [VG]NN{I|L} 2.306 + + 486 1 1.16 56544.9 1.0 7516 5454 12962 HBL1_DMSO_200M_050219_1,12972 HBL1_DMSO_200M_050219_1,12972,GVNNISGIEEV True True GVNNISGIEEV 65.763355 565.78770750761 3217509.0 12962.0 nc|ENSG00000145741|P20290-2|BTF3;;ENSG00000145741|ENST00000380591|BTF3 5.209167957305908 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12973 65.772 502.0 357240.0 25 0 14628.0 -1 RCHRRRRRCCC 11 133 866.9067123982009 1731.7988718632016 2 867.4077636599541 MULTI CID FTMS 0 0 0 12962 366611.65625 0.0203725431888629 -22 1.582000732421875 11 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 3 [NP]{I|L}NM[RH]DAY{I|L}Y[EP] 14 -1 + 62.199 0.0 0.0 3.5916 3.5916 68.219 0.0 0.0 0.0 1.8228720913984449 0.9275405323689868 0.9275405323689868 0.0708447809710577 0 0.5 1.2218487496163564 0.3252574989159953 1.3065533887547016 [NP]{I|L}NM[RH]DAY{I|L}Y[EP];[NP]{I|L}NM[RH]DAN{I|L}[DP][EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DP]{I|L}NADQ{[QD]|[EN]|[WG]|[KD]|[RS]}TM{I|L}Q;[SG]TPN{I|L}NADQ{[QD]|[EN]|[WG]|[KD]|[RS]}TM{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DP]{I|L}NWQ{[QD]|[EN]|[WG]|[KD]|[RS]}TM{I|L}Q;[SG]TPN{I|L}NWQ{[QD]|[EN]|[WG]|[KD]|[RS]}TM{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DP]{I|L}NADQ[RD]G{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NM[RH]D[YT]V{M(Oxidation (M))|F}[EP];[NP]{I|L}[TP][DP]QDAY{I|L}Y[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DP]{I|L}NWQ[RD]G{M(Oxidation (M))|F}{I|L}Q 3.5916;3.5875;3.4863;3.4097;3.3755;3.2978;3.2565;3.2424;3.1726;3.1457 -;-;-;-;-;-;-;-;-;- 2843 1 1.16 122660.6 1.0 7517 5454 12962 HBL1_DMSO_200M_050219_1,12973 HBL1_DMSO_200M_050219_1,12973,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12974 65.777 230.0 869150.0 25 0 81831.0 + 21649 LPLGRELRV 9 122 351.5573572105204 1051.6502422317612 3 351.5571166872978 MULTI CID FTMS 0 0 0 12962 353460.84375 0.285873923317249 -2 0.1152191162109375 12 Unmodified _LPLGRELRV_ ENSG00000011478|ENST00000012049|QPCTL;nc|ENSG00000011478|Q9NXS2-3|QPCTL 37.07464296494664 0.0915153923251136 3 {I|L}P{I|L}VNEV{I|L} 8 5 80.369 0.0 0.0 7.6422 0.0 0.0 0.0 171.08954797916252 171.08954797916252 66.82471691861515 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.2887254899964357 1.579689690656103 {I|L}P{I|L}VNEV{I|L} 7.6422 - 544 + 1 1.16 170425.5 1.0 7518 5454 12962 HBL1_DMSO_200M_050219_1,12974 HBL1_DMSO_200M_050219_1,12974,LPLGRELRV True True LPLGRELRV 65.776553 351.557116687298 10526649.0 12962.0 ENSG00000011478|ENST00000012049|QPCTL;;nc|ENSG00000011478|Q9NXS2-3|QPCTL 3.7088629404703775 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12975 65.785 475.0 374570.0 25 0 36728.0 + 37953 TMFQNDFEKA 10 152 615.7765982897572 1229.5386436463143 2 615.7767822146416 MULTI CID FTMS 0 0 0 12962 336234.0625 0.4276265403333339 -1 0.0664596557617187 13 Unmodified _TMFQNDFEKA_ ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13753187-13770868:+|nuORF;nc|ENSG00000046651|O75665-2|OFD1;nc|ENSG00000046651|O75665-3|OFD1 107.09958533191995 0.0045178149581522 3 TM{M(Oxidation (M))|F}QND{M(Oxidation (M))|F}EAK 10 2 + 108.35 0.0 0.0 8.8126 8.8126 93.611 0.0 0.0 0.0 65.36905423690372 6.78871906616692 6.78871906616692 9.164539485499247 0 0.7302046884880937 1.6989700043360187 1.781234684152075 1.5138793319624575 TM{M(Oxidation (M))|F}QND{M(Oxidation (M))|F}EAK;TM{M(Oxidation (M))|F}QGGD{M(Oxidation (M))|F}EAK;TM{M(Oxidation (M))|F}[AG]ND{M(Oxidation (M))|F}EAK;TM{M(Oxidation (M))|F}QND{M(Oxidation (M))|F}[Q{I|L}]S;TM{M(Oxidation (M))|F}QND{M(Oxidation (M))|F}[{I|L}T]N;TM{M(Oxidation (M))|F}QND{M(Oxidation (M))|F}{[QS]|[NT]}{I|L};TM{M(Oxidation (M))|F}QND{M(Oxidation (M))|F}K{[CP]|[EA]};TM{M(Oxidation (M))|F}QND{M(Oxidation (M))|F}[QT]V;TM{M(Oxidation (M))|F}[AG]GGD{M(Oxidation (M))|F}EAK;TM{M(Oxidation (M))|F}[AG]ND{M(Oxidation (M))|F}[Q{I|L}]S 8.8126;8.0673;8.0673;8.0362;7.954;7.9088;7.7609;7.7428;7.3248;7.2908 -;-;-;-;-;-;-;-;-;- 5391 + 1 1.16 133819.4 1.0 7519 5454 12962 HBL1_DMSO_200M_050219_1,12975 HBL1_DMSO_200M_050219_1,12975,TMFQNDFEKA True True TMFQNDFEKA 65.784974 615.776782214642 4091954.0 12962.0 nc|ENSG00000046651|O75665-3|OFD1;;nc|ENSG00000046651|O75665-2|OFD1;;ENSG00000046651|ENST00000340096|OFD1;;ENST00000490265.5_1_X:13753187-13770868:+|nuORF 7.950793107350667 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12976 65.796 638.0 284180.0 25 0 20205.0 + -1 LLLCMNRSL 9 222 568.2991996791862 1134.5838464251724 2 568.3003417849541 MULTI CID FTMS 0 0 0 12962 155578.796875 0.0100086163592028 24 -1.9794845581054688 14 Carbamidomethyl (C),Oxidation (M) _LLLC(Carbamidomethyl (C))M(Oxidation (M))NRSL_ REV__ENSG00000170881|ENST00000303545|RNF139 12.531546534597751 0.4974689918368763 3 {I|L}{I|L}[C(Carbamidomethyl (C))D]VVT 7 -1 18.394 0.0 0.0 1.6212 0.0 0.0 0.0 331.1485796617537 331.1485796617537 4.360815036920752 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.4247425010840047 0.0 {I|L}{I|L}[C(Carbamidomethyl (C))D]VVT 1.6212 - 17764 1 1.16 138759.6 1.0 7520 5454 12962 HBL1_DMSO_200M_050219_1,12976 HBL1_DMSO_200M_050219_1,12976,LLLCMNRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12977 65.81 800.0 301700.0 25 0 16297.0 + 12104 GQIEFYRRL 9 203 394.55217254355966 0 394.5520507693291 PEAK CID FTMS 0 0 0 12962 143096.59375 0.5890290218697923 -1 0.0664596557617187 15 Unmodified _GQIEFYRRL_ ENSG00000136100|ENST00000378060|VPS36;nc|ENSG00000136100|Q86VN1-2|VPS36 30.63653989081413 0.1077493867305487 3 TKC 3 9 7.5359 0.0 0.0 0.95744 0.0 0.0 163.76851062848397 288.1607760065063 451.9292866349903 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TKC 0.95744 - 19 + 1 1.16 189073.6 0.8399999737739563 7521 5454 12962 HBL1_DMSO_200M_050219_1,12977 HBL1_DMSO_200M_050219_1,12977,GQIEFYRRL True True GQIEFYRRL 65.809913 394.552050769329 1190845.5 12962.0 ENSG00000136100|ENST00000378060|VPS36;;nc|ENSG00000136100|Q86VN1-2|VPS36 2.5250461101531982 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12978 65.822 698.0 279270.0 25 0 65458.0 + 33304 SFSPGAGAF 9 112 840.389315010007 839.3820385434069 1 840.3889648318291 MULTI CID FTMS 0 0 0 12962 140829.4375 0.4423995986094263 -1 0.0664596557617187 16 Unmodified _SFSPGAGAF_ ENSG00000135924|ENST00000336576|DNAJB2;ENST00000472019.5_1_2:220147533-220150716:+|nuORF;ENST00000473750.5_1_2:220147533-220149706:+|nuORF;ENST00000477917.5_1_2:220147847-220147958:+|nuORF;nc|ENSG00000135924|P25686-2|DNAJB2 85.35673624503755 0.0162188719545379 3 [QA]GPSYA{M(Oxidation (M))|F} 8 6 + 57.477 0.0 0.0 6.8475 6.8475 81.888 0.0 0.0 0.0 7.291160592169483 14.904630595263413 7.291160592169483 2.0648562984455765 0 0.2302046884880938 2.0 1.2302046884880935 0.0 [QA]GPSYA{M(Oxidation (M))|F};[QA]GPS{M(Oxidation (M))|F}S{M(Oxidation (M))|F};[PS]GAGAYA{M(Oxidation (M))|F};[PG]AGASYA{M(Oxidation (M))|F};[QP]GASYA{M(Oxidation (M))|F};[PG]ASGAYA{M(Oxidation (M))|F};[PS]QGAYA{M(Oxidation (M))|F};[QP]SGAYA{M(Oxidation (M))|F};[PS]GAGA{M(Oxidation (M))|F}S{M(Oxidation (M))|F};QQPSYA{M(Oxidation (M))|F} 6.8475;6.6015;5.9789;5.8848;5.8302;5.8093;5.7759;5.7548;5.7329;5.7252 -;-;-;-;-;-;-;-;-;- 2257 1 1.16 134093.2 1.0 7522 5454 12962 HBL1_DMSO_200M_050219_1,12978 HBL1_DMSO_200M_050219_1,12978,SFSPGAGAF True True SFSPGAGAF 65.822055 840.388964831829 2058643.125 12962.0 ENSG00000135924|ENST00000336576|DNAJB2;;ENST00000477917.5_1_2:220147847-220147958:+|nuORF;;ENST00000473750.5_1_2:220147533-220149706:+|nuORF;;ENST00000472019.5_1_2:220147533-220150716:+|nuORF;;nc|ENSG00000135924|P25686-2|DNAJB2 7.350161711374919 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12980 65.826 3.3 24256000.0 25 0 4738700.0 + 44597 YPFKPPKI 8 73 330.5321852651292 988.5747263955876 3 330.5321533083916 MULTI CID FTMS 0 0 0 12979 17078174.0 0.9763331659821504 3 -0.2615890502929687 1 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 28.486842064014134 0.4448922141344407 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 57.688 0.0 0.0 5.8355 5.8355 83.435 0.0 0.0 0.0 29.42008053022313 5.528419686577806 5.528419686577806 5.528419686577806 0 0.3054621874040891 1.3010299956639813 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};YP{M(Oxidation (M))|F}KP{I|L}[KP];YP{M(Oxidation (M))|F}K{I|L}P[KP];YP{M(Oxidation (M))|F}{I|L}KP[KP];YP{I|L}{M(Oxidation (M))|F}KP[KP] 5.8355;5.2763;5.0981;4.6155;4.1329 +;-;-;-;- + 149 + 1 1.16 67969.9 1.0 7523 5455 12979 HBL1_DMSO_200M_050219_1,12980 HBL1_DMSO_200M_050219_1,12980,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12981 65.827 11.0 5209000.0 25 0 237290.0 -1 0 76 910.4224863885926 1818.830419843985 2 910.4239379763604 MULTI CID FTMS 0 0 0 12979 5822213.5 1.0 0 0.0 2 3 [MN]PN{I|L}NADQ[PA][SG]AN{I|L} 16 -1 86.803 0.0 0.0 4.7725 0.0 0.0 0.0 208.07325159244377 208.07325159244377 51.838260270914574 0.0 0.0 0.0 0 0.6694451763165201 1.5228787452803376 0.0 1.610924374808178 [MN]PN{I|L}NADQ[PA][SG]AN{I|L} 4.7725 - 1014 + 1 1.16 44813.3 1.0 7524 5455 12979 HBL1_DMSO_200M_050219_1,12981 HBL1_DMSO_200M_050219_1,12981, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12982 65.829 24.0 2769700.0 25 0 325200.0 + 11857 GLSLLRIGT 9 87 465.2924653702253 928.5703778072508 2 465.2930480837822 MULTI CID FTMS 0 0 0 12979 2023934.25 0.9719469657005388 -1 0.0780181884765625 3 Unmodified _GLSLLRIGT_ REV__ENSG00000198734|ENST00000367797|F5 21.53697664764585 0.2571576504437394 3 {[SA]|[TG]}{I|L}VR{I|L}{I|L}GT 9 -1 + 71.419 0.0 0.0 7.6913 7.6913 89.32 0.0 0.0 0.0 6.150249684923296 16.478174818886366 6.150249684923296 6.150249684923296 0 0.7742275032520141 0.4814860601221125 0.4247425010840047 0.0 {[SA]|[TG]}{I|L}VR{I|L}{I|L}GT;[{I|L}A]SVR{I|L}{I|L}GT;{[VA]|[{I|L}G]}TVR{I|L}{I|L}GT;{[SA]|[TG]}{I|L}V[K{I|L}]{I|L}W;[{I|L}A]SV[K{I|L}]{I|L}W;[TP]KR{I|L}[{I|L}T]T;{[VA]|[{I|L}G]}TV[K{I|L}]{I|L}W 7.6913;7.0289;5.8209;3.3589;2.6966;1.5193;1.4886 -;-;-;-;-;-;- 215 1 1.16 56651.6 1.0 7525 5455 12979 HBL1_DMSO_200M_050219_1,12982 HBL1_DMSO_200M_050219_1,12982,GLSLLRIGT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12983 65.83 32.0 1964700.0 25 0 223230.0 -1 PVCLPNVI 8 92 456.2565029054072 910.4984528776145 2 456.2566711306572 MULTI CID FTMS 0 0 0 12979 1710998.625 0.2995555902790544 5 -0.4813232421875 4 Carbamidomethyl (C) _PVC(Carbamidomethyl (C))LPNVI_ ENST00000529121.2_1_11:61101092-61101212:+|nuORF 11.114462752807354 0.7467182956244686 3 P{I|L}A 3 -1 13.812 0.0 0.0 1.517 0.0 0.0 98.97968236135952 527.3205660455686 626.3002484069282 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}A 1.517 - 68 + 1 1.16 54309.7 1.0 7526 5455 12979 HBL1_DMSO_200M_050219_1,12983 HBL1_DMSO_200M_050219_1,12983,PVCLPNVI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12984 65.831 49.0 1115900.0 25 0 89500.0 -1 LCVKLVVF 8 91 489.2958834498205 976.577213966441 2 489.2964050173759 MULTI CID FTMS 0 0 0 12979 980283.1875 0.2195350309163835 3 -0.2615890502929687 5 Carbamidomethyl (C) _LC(Carbamidomethyl (C))VKLVVF_ ENSG00000164168|ENST00000296582|TMEM184C;nc|ENSG00000164168|Q9NVA4-2|TMEM184C 2.889219685676258 0.8067950007271085 3 {I|L} 1 -1 9.9148 0.0 0.0 1.0153 0.0 0.0 845.481676712338 0.0 845.481676712338 0.0 0.310739533744222 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0153 + + 30 + 1 1.16 48807.7 1.0 7527 5455 12979 HBL1_DMSO_200M_050219_1,12984 HBL1_DMSO_200M_050219_1,12984,LCVKLVVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12985 65.833 82.0 759820.0 25 0 136360.0 + 42034 VQTDVLVRV 9 78 514.8087706704728 1027.6029884077454 2 514.8091308474541 MULTI CID FTMS 0 0 0 12979 772310.875 1.0 0 0.0 6 Unmodified _VQTDVLVRV_ ENSG00000134262|ENST00000369569|AP4B1;ENST00000479285.5_1_1:114438859-114442862:-|nuORF;nc|ENSG00000134262|Q9Y6B7-2|AP4B1 38.17557092003332 0.0854718145212029 3 {[QV]|[N{I|L}]|[RA]|[KV]}TDV{I|L}RVV 9 2 {[QV]|[N{I|L}]|[RA]|[KV]} + + 50.711 7.2185 3.1782 4.9349 4.9349 55.419 0.0 0.0 0.0 0.0 33.75569708000178 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}TDV{I|L}RVV 4.9349 - 423 + 1 1.16 53907.3 1.0 7528 5455 12979 HBL1_DMSO_200M_050219_1,12985 HBL1_DMSO_200M_050219_1,12985,VQTDVLVRV True True VQTDVLVRV 65.833 514.809130847454 10472555.0 12979.0 ENSG00000134262|ENST00000369569|AP4B1;;ENST00000479285.5_1_1:114438859-114442862:-|nuORF;;nc|ENSG00000134262|Q9Y6B7-2|AP4B1 4.262314240137736 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12986 65.834 23.0 2244900.0 25 0 124600.0 + 12036 GQDEPLIHV 9 96 504.2622852368165 1006.5100175404332 2 504.2599059939384 MULTI CID FTMS 0 0 0 12979 728170.1875 0.3134865603601497 -3 0.1932373046875 7 Unmodified _GQDEPLIHV_ ENSG00000157778|ENST00000288607|PSMG3 44.40701690623563 0.0526327925666318 3 SP{I|L}{I|L}HV 6 4 24.914 0.0 0.0 2.4753 0.0 0.0 342.1061378302517 0.0 342.1061378302517 0.0 2.594501252857384 0.0 0.0 0 0.0 0.0 0.0 0.0 SP{I|L}{I|L}HV 2.4753 - 157 + 1 1.16 43317.3 1.0 7529 5455 12979 HBL1_DMSO_200M_050219_1,12986 HBL1_DMSO_200M_050219_1,12986,GQDEPLIHV True True GQDEPLIHV 65.834178 504.259905993938 50818288.0 12979.0 ENSG00000157778|ENST00000288607|PSMG3 6.998874982198079 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12987 65.836 107.0 616510.0 25 0 57545.0 38906 TVLENVPL 8 92 442.7565586008183 883.4985642684367 2 442.7567321658134 MULTI CID FTMS 0 0 0 12979 522748.78125 0.4109490616542949 3 -0.2615890502929687 8 Unmodified _TVLENVPL_ ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6-2|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1 5.760428011301431 0.7893668129297577 3 V 1 7 10.181 0.0 0.0 1.1524 0.0 0.0 766.4189724489039 0.0 766.4189724489039 0.0 0.911701041663413 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1524 + + 17 + 1 1.16 59937.4 1.0 7530 5455 12979 HBL1_DMSO_200M_050219_1,12987 HBL1_DMSO_200M_050219_1,12987,TVLENVPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12988 65.838 55.0 1006000.0 25 0 100090.0 + 15413 IPPEVQRIV 9 80 525.8192418989119 1049.6239308646236 2 525.8190185427666 MULTI CID FTMS 0 0 0 12979 441574.0625 1.0 0 0.0 9 Unmodified _IPPEVQRIV_ ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1 22.736283301280096 0.2418982879461534 3 {I|L}PPE 4 5 51.67 0.0 0.0 4.9227 0.0 0.0 0.0 610.3673189752561 610.3673189752561 38.17532531436136 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPE 4.9227 + + 129 + 1 1.16 51531.8 1.0 7531 5455 12979 HBL1_DMSO_200M_050219_1,12988 HBL1_DMSO_200M_050219_1,12988,IPPEVQRIV False True IPPEVQRIV 65.83785 525.819018542767 6112295.0 12979.0 nc|ENSG00000127463|Q8N766-4|EMC1;;nc|ENSG00000127463|Q8N766-2|EMC1;;ENSG00000127463|ENST00000477853|EMC1;;nc|ENSG00000127463|Q8N766-3|EMC1 5.021867275238037 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12989 65.841 171.0 835810.0 25 0 91518.0 + 27544 PKVSPVPT 8 154 412.7463770871613 823.4782012411226 2 412.7461425662041 MULTI CID FTMS 0 0 0 12979 404867.0 0.2971232416153219 -2 0.1444778442382812 10 Unmodified _PKVSPVPT_ REV__ENSG00000180011|ENST00000322342|PTGR3;REV__nc|ENSG00000180011|Q8N4Q0-2|PTGR3 7.910154910731844 0.7763180056447161 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KP]KHA 7 -1 + 19.626 0.0 0.0 2.3833 2.3833 80.784 0.0 0.0 0.0 6.6312546121469325 2.17879772898371 2.17879772898371 19.62607267795065 0 0.0172203223519532 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KP]KHA 2.3833 - 84 1 1.16 112473.5 1.0 7532 5455 12979 HBL1_DMSO_200M_050219_1,12989 HBL1_DMSO_200M_050219_1,12989,PKVSPVPT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 12990 65.85 473.0 402280.0 25 0 42891.0 + 17350 KLYDIDVAKV 10 193 582.3371200440546 1162.659687154909 2 582.3374511599541 MULTI CID FTMS 0 0 0 12979 296231.59375 0.1399493830092782 3 -0.2615890502929687 11 Unmodified _KLYDIDVAKV_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 43.476825903602695 0.120852566744744 3 K{I|L}YD{I|L}DVAVK 10 2 + 45.601 0.0 0.0 3.9222 3.9222 71.38 0.0 0.0 0.0 8.4734177472006 1.4266750356873104 1.4266750356873104 1.4266750356873104 0 3.171885135638809 0.0 0.0 0.1923877696554315 K{I|L}YD{I|L}DVAVK;K{I|L}YD{I|L}DVAKV;K{I|L}YD{I|L}DV[KG]{I|L};K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}A[C(Carbamidomethyl (C))R]AVK;K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}A[C(Carbamidomethyl (C))R]AKV;K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[C(Carbamidomethyl (C))K]VAVK;K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[C(Carbamidomethyl (C))K]VAKV;K{I|L}Y[RH][YG]VK;K{I|L}Y[RH][YG]KV 3.9222;3.7994;2.3832;2.3721;2.2494;2.1329;2.0102;1.8982;1.7755 -;+;-;-;-;-;-;-;- + 4904 + 1 1.16 143727.3 1.0 7533 5455 12979 HBL1_DMSO_200M_050219_1,12990 HBL1_DMSO_200M_050219_1,12990,KLYDIDVAKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12991 65.858 499.0 336910.0 25 0 18906.0 24663 MLTHCNLHLQ 10 179 605.2974560866222 1208.5803592400443 2 605.2980224490166 MULTI CID FTMS 0 0 0 12979 257011.5 0.2902767840352653 3 -0.2615890502929687 12 Unmodified _MLTHCNLHLQ_ ENST00000497415.1_1_3:128359957-128369658:-|nuORF 20.453626601364224 0.5043500229302764 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TE{I|L} 5 6 39.556 0.0 0.0 3.2729 0.0 0.0 0.0 618.2551998985006 618.2551998985006 4.479282954548843 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.113982988912431 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TE{I|L} 3.2729 - 3304 1 1.16 122440.9 1.0 7534 5455 12979 HBL1_DMSO_200M_050219_1,12991 HBL1_DMSO_200M_050219_1,12991,MLTHCNLHLQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 12992 65.868 571.0 186530.0 25 0 26002.0 927 AFHYESQNSTL 11 133 648.7975333496897 1295.5805137661794 2 648.8011962771416 MULTI CID FTMS 0 0 0 12979 185353.796875 1.0 0 0.0 13 Unmodified _AFHYESQNSTL_ ENSG00000144891|ENST00000349243|AGTR1 10.073929032068715 0.8255972128077141 3 {I|L}T{I|L}CT[{M(Oxidation (M))|F}V]DG 9 11 27.546 0.0 0.0 2.1262 0.0 0.0 328.149705955275 0.0 328.149705955275 0.0 12.586675445631592 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}T{I|L}CT[{M(Oxidation (M))|F}V]DG 2.1262 - 738 1 1.16 85360.0 1.0 7535 5455 12979 HBL1_DMSO_200M_050219_1,12992 HBL1_DMSO_200M_050219_1,12992,AFHYESQNSTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12993 65.879 578.0 168070.0 25 0 21917.0 40772 VLLAWRCTKLS 11 120 645.3729676926303 1288.7313824520604 2 645.3732177615166 MULTI CID FTMS 0 0 0 12979 172793.65625 1.0 0 0.0 14 Unmodified _VLLAWRCTKLS_ ENSG00000165355|ENST00000298097|FBXO33 13.042465956692816 0.7638483625850725 3 [{I|L}V]{I|L}T{[CP]|[EA]}[KA]Y 9 6 28.394 0.0 0.0 2.2033 0.0 0.0 0.0 297.1275525509537 297.1275525509537 15.286072174592553 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.7302046884880937 0.0 [{I|L}V]{I|L}T{[CP]|[EA]}[KA]Y 2.2033 - 456 1 1.16 76538.6 1.0 7536 5455 12979 HBL1_DMSO_200M_050219_1,12993 HBL1_DMSO_200M_050219_1,12993,VLLAWRCTKLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12994 65.89 639.0 127800.0 25 0 4285.2 -1 0 117 845.897602638637 0 845.8939697146416 PEAK CID FTMS 0 0 0 12979 156288.125 1.0 0 0.0 15 3 PN{I|L}NEEQHQV 10 -1 59.653 0.0 0.0 3.5302 0.0 0.0 131.03669299923064 367.16269861392817 498.1993916131588 0.0 0.0 0.0 0.0 0 1.5726825097560422 0.0 0.0 0.7742275032520141 PN{I|L}NEEQHQV 3.5302 - 839 + 1 1.16 63543.3 1.0 7537 5455 12979 HBL1_DMSO_200M_050219_1,12994 HBL1_DMSO_200M_050219_1,12994, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 12995 65.901 653.0 149000.0 25 0 17886.0 + 31018 RLFDRGDFYTA 11 105 680.8357494355718 1359.6569459379434 2 680.8359252810478 MULTI CID FTMS 0 0 0 12979 109168.0390625 0.1022263342768471 4 -0.3986282348632812 16 Unmodified _RLFDRGDFYTA_ ENSG00000095002|ENST00000233146|MSH2 7.846045518447754 0.8381297814158264 3 A[YK]V 4 10 14.693 0.0 0.0 1.0806 0.0 0.0 0.0 895.338263165947 895.338263165947 2.910000986994969 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A[YK]V 1.0806 - 161 + 1 1.16 75389.3 1.0 7538 5455 12979 HBL1_DMSO_200M_050219_1,12995 HBL1_DMSO_200M_050219_1,12995,RLFDRGDFYTA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12996 65.914 637.0 192800.0 25 0 19006.0 + 18192 KVAEKLDEIYV 11 134 653.8664263827094 1305.7182998322187 2 653.8671142458916 MULTI CID FTMS 0 0 0 12979 105066.171875 0.7830593749974526 -2 0.1444778442382812 17 Unmodified _KVAEKLDEIYV_ ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP 50.13029200064056 0.116908488078412 3 VAEK{I|L}DE{I|L}YV 10 1 56.316 0.0 0.0 4.3131 0.0 0.0 128.0954304425797 0.0 128.0954304425797 0.0 39.26259015425437 0.0 0.0 0 1.579689690656103 0.0 0.2742275032520141 0.0 + VAEK{I|L}DE{I|L}YV 4.3131 + + 7395 1 1.16 95452.4 1.0 7539 5455 12979 HBL1_DMSO_200M_050219_1,12996 HBL1_DMSO_200M_050219_1,12996,KVAEKLDEIYV True True KVAEKLDEIYV 65.913652 653.867114245892 1620770.75 12979.0 nc|ENSG00000271793|O60506-2|SYNCRIP;;nc|ENSG00000271793|O60506-4|SYNCRIP;;ENSG00000135316|ENST00000369622|SYNCRIP;;nc|ENSG00000271793|O60506-3|SYNCRIP 6.471684614817302 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12998 65.918 7.5 7143000.0 25 0 595880.0 + 21741 LPMDYVQRV 9 63 560.7941034205686 1119.5736539079371 2 560.7947265505791 MULTI CID FTMS 0 0 0 12997 4588341.5 0.79236572382221 -1 0.0915908813476562 1 Unmodified _LPMDYVQRV_ ENSG00000179115|ENST00000314606|FARSA;nc|ENSG00000179115|Q9Y285-2|FARSA 19.62595529434964 0.305431704817896 3 {I|L}PMDYVQ[RV] 9 0 + 75.411 0.0 0.0 6.7357 6.7357 85.512 0.0 0.0 0.0 61.59887825920684 5.642492736872597 5.642492736872597 4.771212547196626 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + {I|L}PMDYVQ[RV];{I|L}PMDVYQ[RV];{I|L}PMVDYQ[RV];{I|L}PMDYV[AG][RV];{I|L}PVMDYQ[RV];{I|L}PMDVY[AG][RV];{I|L}PMVDY[AG][RV];{I|L}PVMDY[AG][RV];{I|L}VPMDYQ[RV];{I|L}VPMDY[AG][RV] 6.7357;6.3095;6.0407;5.9132;5.7718;5.4871;5.2182;4.9493;3.6453;2.8229 +;-;-;-;-;-;-;-;-;- + 164 + 1 1.167 49908.0 1.0 7540 5456 12997 HBL1_DMSO_200M_050219_1,12998 HBL1_DMSO_200M_050219_1,12998,LPMDYVQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 12999 65.919 16.0 2940200.0 25 0 333590.0 + 35946 SVPIDLQKV 9 68 499.7961643719146 997.5777758106292 2 499.7972595095634 MULTI CID FTMS 0 0 0 12997 2918249.25 0.7626653242324833 1 -0.0932769775390625 2 Unmodified _SVPIDLQKV_ ENSG00000198056|ENST00000338193|PRIM1 16.149105407346934 0.3995459350917656 3 [VS]P{I|L}D[Q{I|L}]KV 9 0 + 45.48 0.0 0.0 4.559 4.559 86.946 0.0 0.0 0.0 4.84469123858446 2.948719476111208 2.948719476111208 45.47955381379552 0 0.3807196863200844 2.0 0.0 0.0 + + [VS]P{I|L}D[Q{I|L}]KV 4.559 + + 90 + 1 1.167 44025.0 1.0 7541 5456 12997 HBL1_DMSO_200M_050219_1,12999 HBL1_DMSO_200M_050219_1,12999,SVPIDLQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13000 65.92 15.0 5222200.0 25 0 440210.0 + + 39764 SVPIDLQKV 9 93 499.7216114008648 997.4286698685296 2 499.7215453982353 MULTI CID FTMS 0 0 0 12997 3154444.0 1.0 0 0.0 3 Unmodified _VEMEHWPA_ ENSG00000198056|ENST00000338193|PRIM1 19.438996006549623 0.6237395211498085 3 VE 2 -1 36.172 0.0 0.0 3.6265 0.0 0.0 0.0 766.2941459056779 766.2941459056779 1.3021124171160707 0.0 0.0 0.0 0 0.3252574989159953 0.9208187539523752 0.4247425010840047 0.0 VE 3.6265 + + 169 + 1 1.167 62105.5 1.0 7542 5456 12997 HBL1_DMSO_200M_050219_1,13000 HBL1_DMSO_200M_050219_1,13000,VEMEHWPA False False SVPIDLQKV 65.920229 499.721545398235 52502652.0 12997.0 ENSG00000198056|ENST00000338193|PRIM1 5.685924847920735 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13001 65.921 26.0 1684300.0 25 0 388740.0 + 4986 DGRYALVV 8 64 446.7477896155122 891.4810262978244 2 446.7480041384697 MULTI CID FTMS 0 0 0 12997 1312949.75 0.4560593608463785 1 -0.0932769775390625 4 Unmodified _DGRYALVV_ ENSG00000112972|ENST00000325110|HMGCS1 13.90604991867851 0.7054780292895731 3 {I|L}VV 3 5 28.188 0.0 0.0 3.1619 0.0 0.0 562.2495641855322 0.0 562.2495641855322 0.0 12.703037561203844 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}VV 3.1619 + + 30 1 1.167 41744.9 1.0 7543 5456 12997 HBL1_DMSO_200M_050219_1,13001 HBL1_DMSO_200M_050219_1,13001,DGRYALVV False True DGRYALVV 65.921408 446.74800413847 19023466.0 12997.0 ENSG00000112972|ENST00000325110|HMGCS1 2.8009790579477944 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13002 65.923 18.0 1747400.0 25 0 139950.0 + 19819 LGYIFAFL 8 69 472.2690951528654 942.5236373725309 2 472.2704650759697 MULTI CID FTMS 0 0 0 12997 1083712.0 0.289325503539139 6 -0.5455780029296875 5 Unmodified _LGYIFAFL_ REV__ENSG00000253710|ENST00000521508|ALG11 11.114462752807354 0.7467182956244686 3 G{I|L} 2 -1 16.198 0.0 0.0 1.7186 0.0 0.0 754.4070735070997 0.0 754.4070735070997 0.0 4.515449934959719 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L} 1.7186 - 45 + 1 1.167 32095.5 1.0 7544 5456 12997 HBL1_DMSO_200M_050219_1,13002 HBL1_DMSO_200M_050219_1,13002,LGYIFAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13003 65.924 49.0 1087000.0 25 0 215430.0 + 17981 KRPAAHGA 8 82 404.2334507410288 806.4523485488577 2 404.2330505251884 MULTI CID FTMS 0 0 0 12997 840607.375 0.3748695036567963 -4 0.2848281860351562 6 Unmodified _KRPAAHGA_ REV__ENST00000389201.7_1_19:51052051-51071289:-|nuORF 0.7936320650641473 0.8195151834710337 3 {I|L} 1 -1 8.9258 0.0 0.0 1.1068 0.0 0.0 675.3572690584265 0.0 675.3572690584265 0.0 8.441230694721229 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1068 - 3 + 1 1.167 45680.7 1.0 7545 5456 12997 HBL1_DMSO_200M_050219_1,13003 HBL1_DMSO_200M_050219_1,13003,KRPAAHGA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13004 65.925 18.0 2074100.0 25 0 114480.0 8577 ETQARWAV 8 76 480.7484482996413 959.4823436660828 2 480.7483093142509 MULTI CID FTMS 0 0 0 12997 763916.5 0.9211895164952324 -1 0.0915908813476562 7 Unmodified _ETQARWAV_ ENSG00000010932|ENST00000617670|FMO1;ENST00000469112.5_2_1:171244541-171251486:+|nuORF;nc|ENSG00000010932|Q01740-2|FMO1 10.183394434864962 0.7604730176254005 3 [DP]VTE 5 8 18.188 0.0 0.0 1.8956 0.0 0.0 0.0 415.2227971175077 415.2227971175077 4.208187539523749 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 [DP]VTE 1.8956 - 65 1 1.167 34004.7 1.0 7546 5456 12997 HBL1_DMSO_200M_050219_1,13004 HBL1_DMSO_200M_050219_1,13004,ETQARWAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13005 65.929 180.0 496390.0 25 0 35620.0 -1 LPCDCYPV 8 139 483.70782915879823 965.4011053843964 2 483.7077514529228 MULTI CID FTMS 0 0 0 12997 620488.0625 1.0 0 0.0 8 Carbamidomethyl (C) _LPC(Carbamidomethyl (C))DCYPV_ ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3 22.4526382665184 0.5719518724627818 3 {I|L}S 2 -1 38.32 0.0 0.0 3.9694 0.0 0.0 0.0 762.2653811821925 762.2653811821925 18.711375162600707 0.0 0.0 0.0 0 0.2134679910804404 1.0969100130080565 0.4247425010840047 0.0 {I|L}S 3.9694 - 408 + 1 1.167 72700.3 1.0 7547 5456 12997 HBL1_DMSO_200M_050219_1,13005 HBL1_DMSO_200M_050219_1,13005,LPCDCYPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13006 65.93 57.0 579650.0 25 0 27303.0 + 13131 HFHWTSQSF 9 81 588.7646531788142 1175.5147534244284 2 588.7643920779228 MULTI CID FTMS 0 0 0 12997 506343.78125 0.3730540431246119 1 -0.0932769775390625 9 Unmodified _HFHWTSQSF_ ENST00000507823.5_1_5:174919150-174919204:+|nuORF 46.92087301778293 0.0471210510596396 3 {[{M(Oxidation (M))|F}H]|[RQ]}HTWS 6 4 42.357 0.0 0.0 3.6032 0.0 0.0 0.0 377.14186459069714 377.14186459069714 9.960762528683702 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.4247425010840047 0.5 {[{M(Oxidation (M))|F}H]|[RQ]}HTWS 3.6032 - 206 1 1.167 34033.2 1.0 7548 5456 12997 HBL1_DMSO_200M_050219_1,13006 HBL1_DMSO_200M_050219_1,13006,HFHWTSQSF True True HFHWTSQSF 65.930002 588.764392077923 22637484.0 12997.0 ENST00000507823.5_1_5:174919150-174919204:+|nuORF 8.939912478129068 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13007 65.931 52.0 581470.0 25 0 44853.0 -1 FFEQCFVV 8 79 538.2488663777486 1074.4831798222972 2 538.2493163943291 MULTI CID FTMS 0 0 0 12997 483235.4375 0.9472818458536578 -2 0.1696090698242187 10 Carbamidomethyl (C) _FFEQC(Carbamidomethyl (C))FVV_ L1PB1_dup10052|chr12:47254957-47257203:+|1.548341044108226|0.3758641288713036|2.04|48.0|129|3|anti-sense 9.347437153973935 0.7675937258251505 3 {I|L}AD[YR] 5 -1 22.703 0.0 0.0 2.1129 0.0 0.0 438.1602560935847 0.0 438.1602560935847 0.0 3.2390874094431865 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}AD[YR] 2.1129 - 106 + 1 1.167 31495.7 1.0 7549 5456 12997 HBL1_DMSO_200M_050219_1,13007 HBL1_DMSO_200M_050219_1,13007,FFEQCFVV False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 13008 65.94 485.0 252290.0 25 0 11663.0 + 35688 SVFESSDEV 9 185 333.48315704832896 997.427641745187 3 333.4831115603447 MULTI CID FTMS 0 0 0 12997 492851.03125 1.0 0 0.0 11 Unmodified _SVFESSDEV_ REV__ENSG00000213512|ENST00000294671|GBP7 12.240655878213236 0.5053430591993562 3 SVTC 4 -1 29.725 0.0 0.0 2.9801 0.0 0.0 0.0 604.2519625299436 604.2519625299436 11.765997036641592 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 SVTC 2.9801 - 431 + 1 1.167 99550.9 1.0 7550 5456 12997 HBL1_DMSO_200M_050219_1,13008 HBL1_DMSO_200M_050219_1,13008,SVFESSDEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13009 65.943 141.0 667800.0 25 0 78704.0 + 10918 GAIVGAIKVTH 11 119 533.3242896876103 1064.6340264420205 2 533.3246948122978 MULTI CID FTMS 0 0 0 12997 346509.6875 0.4836459569802667 1 -0.0932769775390625 12 Unmodified _GAIVGAIKVTH_ REV__ENSG00000173482|ENST00000580170|PTPRM;REV__ENST00000577827.5_1_18:8122082-8296373:+|nuORF;REV__nc|ENSG00000173482|P28827|PTPRM 13.90604991867851 0.7458848613461305 3 [NP]VVE 5 -1 21.637 0.0 0.0 2.0323 0.0 0.0 0.0 523.332609776258 523.332609776258 2.308445514391856 0.0 0.0 0.0 0 0.0 2.0 0.0 0.2059771852360797 [NP]VVE 2.0323 - 179 1 1.167 79105.5 1.0 7551 5456 12997 HBL1_DMSO_200M_050219_1,13009 HBL1_DMSO_200M_050219_1,13009,GAIVGAIKVTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13010 65.951 447.0 301580.0 25 0 59686.0 -1 VSGFGMEMGW 10 148 566.7276123348713 0 566.7275878787041 PEAK CID FTMS 0 0 0 12997 320186.03125 1.0 0 0.0 13 2 Oxidation (M) _VSGFGM(Oxidation (M))EM(Oxidation (M))GW_ ENSG00000139178|ENST00000266542|C1RL;ENST00000544702.5_1_12:7248989-7252531:-|nuORF 14.838274106304384 0.3381107837965078 3 E 1 -1 8.2268 0.0 0.0 0.72711 0.0 0.0 117.0802058772011 882.297335802916 999.3775416801172 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 E 0.72711 + + 57 + 1 1.167 105671.2 1.0 7552 5456 12997 HBL1_DMSO_200M_050219_1,13010 HBL1_DMSO_200M_050219_1,13010,VSGFGMEMGW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13011 65.953 84.0 558320.0 25 0 87413.0 + + 44171 YLTDRVMTV 9 71 548.7871573969668 1095.5597618607335 2 549.2874023318291 MULTI CID FTMS 0 0 0 12997 287504.03125 0.0927005861416179 -4 0.2848281860351562 14 Unmodified _YLDTRQTLS_ nc|ENSG00000171720|O15379-2|HDAC3;ENSG00000171720|ENST00000305264|HDAC3;ENST00000469550.6_1_5:141001037-141014565:-|nuORF 21.59015148037692 0.2564810811560323 3 [Y{I|L}]D 3 -1 35.502 0.0 0.0 3.2405 0.0 0.0 0.0 701.363729094294 701.363729094294 14.78855930516417 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 [Y{I|L}]D 3.2405 + + 85 + 1 1.167 40822.7 1.0 7553 5456 12997 HBL1_DMSO_200M_050219_1,13011 HBL1_DMSO_200M_050219_1,13011,YLDTRQTLS False False YLTDRVMTV 65.952637 549.287402331829 23592014.0 12997.0 nc|ENSG00000171720|O15379-2|HDAC3;;ENSG00000171720|ENST00000305264|HDAC3;;ENST00000469550.6_1_5:141001037-141014565:-|nuORF 3.663995703061422 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13012 65.961 483.0 243340.0 25 0 49571.0 + 13372 HLIDPNTLQVA 11 126 610.8337861453374 1219.6530193574747 2 610.8356201052666 MULTI CID FTMS 0 0 0 12997 270086.0 0.9414275405139712 -2 0.1696090698242187 15 Unmodified _HLIDPNTLQVA_ ENSG00000169251|ENST00000351193|NMD3;ENST00000439704.1_1_7:63369621-63370485:-|nuORF 28.49450938151212 0.4231428536161201 3 [H{I|L}]{I|L}DG[PG]T{I|L}Q{[VA]|[{I|L}G]} 12 2 + 47.769 0.0 0.0 3.9166 3.9166 70.005 0.0 0.0 0.0 11.240791961893962 7.447274948966935 7.447274948966935 0.5912145211865649 0 0.0 0.721246399047171 0.8494850021680094 0.0 [H{I|L}]{I|L}DG[PG]T{I|L}Q{[VA]|[{I|L}G]};[H{I|L}]{I|L}D[NP]T{I|L}Q{[VA]|[{I|L}G]};[H{I|L}]{I|L}YYT{I|L}Q{[VA]|[{I|L}G]};[H{I|L}]{I|L}DG[PG]TQ{I|L}{[VA]|[{I|L}G]};[H{I|L}]{I|L}DG[PG]T{I|L}[AG]{[VA]|[{I|L}G]};[H{I|L}]{I|L}D[NP]TQ{I|L}{[VA]|[{I|L}G]};[H{I|L}]{I|L}D[NP]T{I|L}[AG]{[VA]|[{I|L}G]};[{I|L}T][YT]G[PG]T{I|L}Q{[VA]|[{I|L}G]};{[QV]|[N{I|L}]|[RA]|[KV]}[PG]PG[PG]T{I|L}Q{[VA]|[{I|L}G]};[{I|L}T][YT][NP]T{I|L}Q{[VA]|[{I|L}G]} 3.9166;3.8681;3.329;3.1772;3.1706;3.1287;3.1197;2.995;2.9944;2.9465 -;+;-;-;-;-;-;-;-;- + 804 1 1.167 94067.0 1.0 7554 5456 12997 HBL1_DMSO_200M_050219_1,13012 HBL1_DMSO_200M_050219_1,13012,HLIDPNTLQVA False True HLIDPNTLQVA 65.961189 610.835620105267 3011317.75 12997.0 ENSG00000169251|ENST00000351193|NMD3;;ENST00000439704.1_1_7:63369621-63370485:-|nuORF 7.261135737101237 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13013 65.971 529.0 425900.0 25 0 80425.0 + 43865 YFLYVGTGRE 10 156 602.8031661720382 1203.5917794108764 2 602.8029662966728 MULTI CID FTMS 0 0 0 12997 208632.765625 0.5956636745406262 1 -0.0932769775390625 16 Unmodified _YFLYVGTGRE_ REV__ENSG00000133962|ENST00000256343|CATSPERB 43.77239144664712 0.1177314611616471 3 Y{M(Oxidation (M))|F}{I|L}VT[DP]NHV 10 -1 + 61.235 0.0 0.0 5.0877 5.0877 72.688 0.0 0.0 0.0 16.53212513775344 3.424226808222066 3.424226808222066 0.071297076834611 0 0.8494850021680094 0.0 0.3807196863200844 0.3807196863200844 Y{M(Oxidation (M))|F}{I|L}VT[DP]NHV;Y{M(Oxidation (M))|F}{I|L}[HQ]{M(Oxidation (M))|F}NHV;Y{M(Oxidation (M))|F}{I|L}VT[DP]NVH;Y{M(Oxidation (M))|F}{I|L}[HQ]{M(Oxidation (M))|F}NVH;Y{M(Oxidation (M))|F}{I|L}VY[WQ]SV;Y{M(Oxidation (M))|F}{I|L}VT[QT]{M(Oxidation (M))|F}SV;Y{M(Oxidation (M))|F}{I|L}YV[WQ]SV;Y{M(Oxidation (M))|F}{I|L}VY[YT]HV;Y{M(Oxidation (M))|F}{I|L}VTYYHV;[YG]N[{I|L}A]YV{I|L}EY 5.0877;5.0818;4.8032;4.7973;4.6352;4.5075;4.2493;4.2323;4.2287;4.1603 -;-;-;-;-;-;-;-;-;- 2242 + 1 1.167 161760.3 1.0 7555 5456 12997 HBL1_DMSO_200M_050219_1,13013 HBL1_DMSO_200M_050219_1,13013,YFLYVGTGRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13014 65.974 191.0 215960.0 25 0 14405.0 28580 PTTARTRP 8 91 450.25581721466665 898.4970814961333 2 450.2563659548759 MULTI CID FTMS 0 0 0 12997 197393.578125 0.2401198243291172 6 -0.5455780029296875 17 Unmodified _PTTARTRP_ ENSG00000176945|ENST00000447234|MUC20;nc|ENSG00000176945|Q8N307-3|MUC20 9.347437153973935 0.7675937258251505 3 V 1 8 13.099 0.0 0.0 1.4579 0.0 0.0 781.4175888587295 0.0 781.4175888587295 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4579 - 49 + 1 1.167 35927.4 1.0 7556 5456 12997 HBL1_DMSO_200M_050219_1,13014 HBL1_DMSO_200M_050219_1,13014,PTTARTRP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13015 65.985 544.0 123780.0 25 0 11957.0 + 45571 YVDQVDEDIVA 11 114 633.296313326995 1264.57807372079 2 633.2974731326103 MULTI CID FTMS 0 0 0 12997 176248.703125 0.0385642407028042 6 -0.5455780029296875 18 Unmodified _YVDQVDEDIVA_ ENSG00000162688|ENST00000361915|AGL;nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL 12.240655878213236 0.7805268987462184 3 [YV]W 3 9 22.676 0.0 0.0 1.7932 0.0 0.0 0.0 813.3331145745586 813.3331145745586 -0.1748371339363146 0.0 -0.1748371339363146 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YV]W 1.7932 - 233 1 1.167 58765.0 1.0 7557 5456 12997 HBL1_DMSO_200M_050219_1,13015 HBL1_DMSO_200M_050219_1,13015,YVDQVDEDIVA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13016 65.996 628.0 87248.0 25 0 7966.1 + 10821 FYYENENVKGL 11 85 688.33003666338 1374.64552039356 2 688.8311645388603 MULTI CID FTMS 0 0 0 12997 169871.875 0.7950396569156486 1 -0.0932769775390625 19 Unmodified _FYYENENVKGL_ ENSG00000137628|ENST00000393743|DDX60 17.44264345198275 0.6723198055858692 3 [{I|L}P]T[NP][H{I|L}]EY[YE] 11 10 + 28.288 0.0 0.0 2.0578 2.0578 78.731 0.0 0.0 0.0 8.282735463467684 6.861144873865154 6.861144873865154 10.50923525086226 0 0.3807196863200844 1.3979400086720375 0.0 0.0 [{I|L}P]T[NP][H{I|L}]EY[YE];[Y{M(Oxidation (M))|F}]YE[QP]{[MS]|[{M(Oxidation (M))|F}A]}PT{I|L};[Y{M(Oxidation (M))|F}]YE[H{I|L}][NP]PPV;[Y{M(Oxidation (M))|F}][{I|L}V][H{I|L}]EY[YE];[{I|L}T]P[NP][H{I|L}]EY[YE] 2.0578;1.2933;0.6814;0.44695;0.23053 -;-;-;-;- 125 1 1.167 45273.7 1.0 7558 5456 12997 HBL1_DMSO_200M_050219_1,13016 HBL1_DMSO_200M_050219_1,13016,FYYENENVKGL False True FYYENENVKGL 65.99591 688.83116453886 2953402.75 12997.0 ENSG00000137628|ENST00000393743|DDX60 5.085450013478597 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13017 66.007 627.0 142690.0 25 0 9191.4 -1 LESDEHTCPTC 11 130 674.7623885706736 1347.510224208147 2 674.7636596560478 MULTI CID FTMS 0 0 0 12997 150763.78125 0.2006836680889057 1 -0.0932769775390625 20 2 Carbamidomethyl (C) _LESDEHTC(Carbamidomethyl (C))PTC(Carbamidomethyl (C))_ ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6 5.296884461304476 0.8501568894076437 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}ESVG 7 -1 37.183 0.0 0.0 2.7594 0.0 0.0 0.0 631.117621018947 631.117621018947 19.17497514563655 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.2887254899964357 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}ESVG 2.7594 - 1246 1 1.167 71824.9 1.0 7559 5456 12997 HBL1_DMSO_200M_050219_1,13017 HBL1_DMSO_200M_050219_1,13017,LESDEHTCPTC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13019 66.011 7.3 8373200.0 25 0 900130.0 + 30031 QTPQRLLEV 9 86 542.3114583359417 1082.6083637386832 2 542.3118163943291 MULTI CID FTMS 0 0 0 13018 6790041.0 0.7869639912254625 1 -0.07672119140625 1 Unmodified _QTPQRLLEV_ ENSG00000133119|ENST00000380071|RFC3;nc|ENSG00000133119|P40938-2|RFC3 53.832793166522166 0.0319663582346103 3 [QT][RH]A{I|L}{I|L}E 8 4 34.804 0.0 0.0 3.2148 0.0 0.0 0.0 131.079224904952 131.079224904952 20.82441255669813 0.0 0.0 0.0 0 0.5 1.3010299956639813 1.0356668758921828 0.2614393726401688 [QT][RH]A{I|L}{I|L}E 3.2148 - 108 1 1.169 55822.0 1.0 7560 5457 13018 HBL1_DMSO_200M_050219_1,13019 HBL1_DMSO_200M_050219_1,13019,QTPQRLLEV True True QTPQRLLEV 66.011149 542.311816394329 153049568.0 13018.0 ENSG00000133119|ENST00000380071|RFC3;;nc|ENSG00000133119|P40938-2|RFC3 7.439647992451985 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13020 66.012 22.0 1896200.0 25 0 403290.0 + 37819 TLTEEGVIKV 10 67 544.8132146657598 1087.6118763983195 2 544.8135864138603 MULTI CID FTMS 0 0 0 13018 2023121.875 0.2442223113639646 2 -0.2137603759765625 2 Unmodified _TLTEEGVIKV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 15.538449434065043 0.58682192184891 3 [{I|L}T]TEER{I|L} 7 4 55.265 0.0 0.0 5.0814 0.0 0.0 0.0 242.151178228186 242.151178228186 31.313054281256072 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 [{I|L}T]TEER{I|L} 5.0814 - 106 + 1 1.169 40610.1 1.0 7561 5457 13018 HBL1_DMSO_200M_050219_1,13020 HBL1_DMSO_200M_050219_1,13020,TLTEEGVIKV False True TLTEEGVIKV 66.012326 544.81358641386 194197776.0 13018.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 7.860856374104817 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13021 66.014 8.5 7756600.0 25 0 773710.0 + 44604 YPFKPPKI 8 68 495.29454849115496 988.57454404911 2 495.2947875857353 MULTI CID FTMS 0 0 0 13018 6095973.0 0.6190591863214936 5 -0.452301025390625 3 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 44.40701690623563 0.1655546087385432 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 69.353 0.0 0.0 7.0154 7.0154 94.178 0.0 0.0 0.0 47.68359738352309 8.849425360888716 8.849425360888716 25.568109453757657 0 0.7059771852360797 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 7.0154;4.429 +;- + 118 + 1 1.169 58123.8 1.0 7562 5457 13018 HBL1_DMSO_200M_050219_1,13021 HBL1_DMSO_200M_050219_1,13021,YPFKPPKI False True YPFKPPKI 66.013505 495.294787585735 1113742320.0 13018.0 ENSG00000072401|ENST00000373910|UBE2D1;;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;;nc|ENSG00000185651|P68036-3|UBE2L3;;nc|ENSG00000185651|P68036-2|UBE2L3;;ENSG00000185651|ENST00000342192|UBE2L3 6.036281903584798 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13022 66.015 9.5 3219600.0 25 0 311850.0 + 5151 DIKDTEPLI 9 63 522.2846118741745 1042.554670815149 2 522.2849609255791 MULTI CID FTMS 0 0 0 13018 3751740.0 1.0 0 0.0 4 Unmodified _DIKDTEPLI_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 41.8396318013385 0.0653578398400075 3 [{I|L}P]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}TE 6 6 27.637 0.0 0.0 2.6509 0.0 0.0 0.0 338.2082513788417 338.2082513788417 10.46983721748951 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.7742275032520141 0.0 [{I|L}P]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}TE 2.6509 - 60 1 1.169 32009.5 1.0 7563 5457 13018 HBL1_DMSO_200M_050219_1,13022 HBL1_DMSO_200M_050219_1,13022,DIKDTEPLI True True DIKDTEPLI 66.014685 522.284960925579 40187432.0 13018.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 3.522428671518961 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13023 66.016 31.0 2070500.0 25 0 145710.0 + 41391 VPLAKGTLI 9 87 456.2995620630855 910.584571192971 2 456.2999450564384 MULTI CID FTMS 0 0 0 13018 1086857.875 0.7485811602183498 -3 0.2628860473632812 5 Unmodified _VPLAKGTLI_ ENSG00000119285|ENST00000366582|HEATR1 27.628801355627647 0.1796483985696185 3 VP{I|L}A[KA]S{I|L}{I|L} 9 2 + 57.075 0.0 0.0 6.268 6.268 92.879 0.0 0.0 0.0 33.122600263328295 11.170912423450403 11.170912423450403 57.075025190615136 0 0.3252574989159953 1.2218487496163564 0.0 0.0 VP{I|L}A[KA]S{I|L}{I|L} 6.268 - 121 + 1 1.169 58738.9 1.0 7564 5457 13018 HBL1_DMSO_200M_050219_1,13023 HBL1_DMSO_200M_050219_1,13023,VPLAKGTLI False True VPLAKGTLI 66.015864 456.299945056438 43256884.0 13018.0 ENSG00000119285|ENST00000366582|HEATR1 3.427404006322225 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13024 66.017 28.0 1132000.0 25 0 61525.0 8553 ETKARRTV 8 70 480.7828707948629 959.5511886565256 2 480.7828552126884 MULTI CID FTMS 0 0 0 13018 1076310.25 0.2305892481475963 5 -0.452301025390625 6 Unmodified _ETKARRTV_ ENST00000455639.6_1_4:156588198-156588336:+|nuORF 5.760428011301431 0.7893668129297577 3 V 1 7 13.979 0.0 0.0 1.4569 0.0 0.0 842.4716273545711 0.0 842.4716273545711 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.4569 + + 37 + 1 1.169 32666.1 1.0 7565 5457 13018 HBL1_DMSO_200M_050219_1,13024 HBL1_DMSO_200M_050219_1,13024,ETKARRTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13025 66.018 49.0 947990.0 25 0 68563.0 + 24853 MPLVKSVTV 9 90 487.2894483836528 972.5643438341056 2 487.7914611697197 MULTI CID FTMS 0 0 0 13018 748129.3125 0.1959645516085142 -3 0.2628860473632812 7 Unmodified _MPLVKSVTV_ ENSG00000164307|ENST00000443439|ERAP1;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1 19.361941925380144 0.3125782356748823 3 MP{I|L}V 4 5 46.547 0.0 0.0 4.786 0.0 0.0 0.0 529.3009737604124 529.3009737604124 31.3529481476577 0.0 0.0 0.0 0 0.2134679910804404 1.3979400086720375 0.0 0.0 + MP{I|L}V 4.786 + + 33 + 1 1.169 39377.3 1.0 7566 5457 13018 HBL1_DMSO_200M_050219_1,13025 HBL1_DMSO_200M_050219_1,13025,MPLVKSVTV False True MPLVKSVTV 66.018343 487.79146116972 82917608.0 13018.0 nc|ENSG00000164307|Q9NZ08-2|ERAP1;;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;;ENSG00000164307|ENST00000443439|ERAP1 5.415025552113851 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13026 66.02 52.0 948230.0 25 0 79008.0 + 24761 MPHLSMQQV 9 76 535.76056334272 1069.50657375224 2 535.7639037966728 MULTI CID FTMS 0 0 0 13018 715350.8125 0.0631966051795802 -7 0.519805908203125 8 Unmodified _MPHLSMQQV_ ENSG00000142207|ENST00000382751|URB1 34.10243960390752 0.1078313939113124 3 QMS[DV]{M(Oxidation (M))|F}V 7 7 26.463 0.0 0.0 2.4743 0.0 0.0 245.13549328524624 0.0 245.13549328524624 0.0 17.48351440884292 0.0 0.0 0 0.6989700043360187 0.0 0.7614393726401688 0.0 QMS[DV]{M(Oxidation (M))|F}V 2.4743 - 190 + 1 1.169 43407.8 1.0 7567 5457 13018 HBL1_DMSO_200M_050219_1,13026 HBL1_DMSO_200M_050219_1,13026,MPHLSMQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13027 66.022 103.0 555310.0 25 0 62263.0 + 12846 GVVEGKALSEL 11 81 551.310870277196 1100.607187621192 2 551.3110229372978 MULTI CID FTMS 0 0 0 13018 602994.625 0.2402958275226455 -3 0.2628860473632812 9 Unmodified _GVVEGKALSEL_ ENSG00000078237|ENST00000179259|TIGAR 33.4449034751529 0.3133739643825231 3 [VG]V[{M(Oxidation (M))|F}T]V{I|L}AND 10 7 64.659 0.0 0.0 5.8748 0.0 0.0 0.0 82.06697260074452 82.06697260074452 13.066884185923657 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.4291746928241125 0.0 [VG]V[{M(Oxidation (M))|F}T]V{I|L}AND 5.8748 - 1428 + 1 1.169 50431.6 1.0 7568 5457 13018 HBL1_DMSO_200M_050219_1,13027 HBL1_DMSO_200M_050219_1,13027,GVVEGKALSEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13028 66.024 67.0 668440.0 25 0 59397.0 + 26223 NQIPTVNNL 9 75 506.7754190522648 0 506.7748596072197 PEAK CID FTMS 0 0 0 13018 587619.9375 0.2069118165138971 5 -0.452301025390625 10 Unmodified _NQIPTVNNL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 46.020951573049366 0.0425517664003206 3 R{I|L} 2 8 12.206 0.0 0.0 1.2067 0.0 0.0 500.26066368871074 239.07904993228752 739.3397136209983 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 R{I|L} 1.2067 - 69 + 1 1.169 42177.2 1.0 7569 5457 13018 HBL1_DMSO_200M_050219_1,13028 HBL1_DMSO_200M_050219_1,13028,NQIPTVNNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13029 66.026 96.0 524180.0 25 0 41028.0 + 41401 VPLDGRPMNI 10 75 556.2996133434849 1110.5846737537695 2 556.3000366091728 MULTI CID FTMS 0 0 0 13018 541587.9375 0.0469585704074301 8 -0.6547622680664062 11 Unmodified _VPLDGRPMNI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 31.26834338654808 0.266153677697784 3 VP{I|L}DGR 6 4 64.998 0.0 0.0 5.8526 0.0 0.0 0.0 470.2077730768188 470.2077730768188 39.31154422187667 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.4247425010840047 + VP{I|L}DGR 5.8526 + + 160 + 1 1.169 48447.8 1.0 7570 5457 13018 HBL1_DMSO_200M_050219_1,13029 HBL1_DMSO_200M_050219_1,13029,VPLDGRPMNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13030 66.027 65.0 552510.0 25 0 72846.0 -1 LEKVCVETV 9 75 538.7850504685234 1075.5555480038468 2 538.7858154177666 MULTI CID FTMS 0 0 0 13018 453318.03125 0.7639788624911706 -4 0.329345703125 12 Carbamidomethyl (C) _LEKVC(Carbamidomethyl (C))VETV_ ENSG00000182054|ENST00000330062|IDH2;nc|ENSG00000182054|P48735-2|IDH2 16.942295170755138 0.3780752226737986 3 TV 2 -1 18.812 0.0 0.0 1.7491 0.0 0.0 857.4281809157593 0.0 857.4281809157593 0.0 1.377268672201449 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 TV 1.7491 + + 184 + 1 1.169 37517.3 1.0 7571 5457 13018 HBL1_DMSO_200M_050219_1,13030 HBL1_DMSO_200M_050219_1,13030,LEKVCVETV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13031 66.036 505.0 361070.0 25 0 48652.0 + 43727 YYYDGDIGNY 10 156 621.7509952289752 1241.4874375247502 2 621.7513915896416 MULTI CID FTMS 0 0 0 13018 326661.03125 0.3162860386977399 -4 0.329345703125 13 Unmodified _YDGDIGNYYY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 61.357469665136826 0.0330252915653943 3 {[YD]|[{M(Oxidation (M))|F}M]}GDYY 6 4 38.135 0.0 0.0 3.0718 0.0 0.0 0.0 462.1980584072893 462.1980584072893 2.183572412715442 0.0 0.0 0.0 0 0.0 0.958607314841775 1.615356566548286 0.0 {[YD]|[{M(Oxidation (M))|F}M]}GDYY 3.0718 - 5170 1 1.169 134128.6 1.0 7572 5457 13018 HBL1_DMSO_200M_050219_1,13031 HBL1_DMSO_200M_050219_1,13031,YDGDIGNYYY True False YYYDGDIGNY 66.036124 621.751391589642 10256567.0 13018.0 ENSG00000196591|ENST00000519065|HDAC2;;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 6.680069287618001 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13032 66.039 127.0 502340.0 25 0 46792.0 2820 AVAAKHRD 8 104 434.24326329186215 866.4719736505243 2 434.2428161501884 MULTI CID FTMS 0 0 0 13018 319670.96875 0.1260173563576691 7 -0.5848541259765625 14 Unmodified _AVAAKHRD_ ENSG00000083067|ENST00000677713|TRPM3;ENSG00000134160|ENST00000256552|TRPM1;ENST00000560801.5_2_15:31320559-31354823:-|nuORF;nc|ENSG00000083067|Q9HCF6-10|TRPM3;nc|ENSG00000083067|Q9HCF6-11|TRPM3;nc|ENSG00000083067|Q9HCF6-2|TRPM3;nc|ENSG00000083067|Q9HCF6-4|TRPM3;nc|ENSG00000083067|Q9HCF6-5|TRPM3;nc|ENSG00000083067|Q9HCF6-6|TRPM3;nc|ENSG00000083067|Q9HCF6-7|TRPM3;nc|ENSG00000083067|Q9HCF6-8|TRPM3;nc|ENSG00000083067|Q9HCF6|TRPM3;nc|ENSG00000134160|Q7Z4N2-2|TRPM1;nc|ENSG00000134160|Q7Z4N2-3|TRPM1;nc|ENSG00000134160|Q7Z4N2-5|TRPM1;nc|ENSG00000134160|Q7Z4N2|TRPM1 6.354104778181461 0.7857632046190106 3 {I|L} 1 8 10.089 0.0 0.0 1.1643 0.0 0.0 735.3769551952494 0.0 735.3769551952494 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1643 - 26 + 1 1.169 51886.0 1.0 7573 5457 13018 HBL1_DMSO_200M_050219_1,13032 HBL1_DMSO_200M_050219_1,13032,AVAAKHRD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13033 66.041 125.0 313080.0 25 0 22689.0 14739 ILCKKSQP 8 81 458.7695897848872 915.5246266365745 2 458.7696105837822 MULTI CID FTMS 0 0 0 13018 300313.625 0.2388568122155042 5 -0.452301025390625 15 Unmodified _ILCKKSQP_ ENSG00000197748|ENST00000357060|CFAP43;nc|ENSG00000197748|Q8NDM7-2|CFAP43;nc|ENSG00000197748|Q8NDM7-3|CFAP43;nc|ENSG00000197748|Q8NDM7-4|CFAP43;nc|ENSG00000197748|Q8NDM7-5|CFAP43 4.75600775471527 0.7954636275367004 3 M 1 8 12.764 0.0 0.0 1.3942 0.0 0.0 766.4734009059088 0.0 766.4734009059088 0.0 1.5270847890886683 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.3942 - 17 + 1 1.169 38924.5 1.0 7574 5457 13018 HBL1_DMSO_200M_050219_1,13033 HBL1_DMSO_200M_050219_1,13033,ILCKKSQP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13034 66.045 193.0 301090.0 25 0 23522.0 + 39044 TVVEDGSLPQV 11 95 572.298975248926 1142.583397564652 2 572.2988769412041 MULTI CID FTMS 0 0 0 13018 243890.421875 0.5871795083999204 -3 0.2628860473632812 16 Unmodified _TVVEDGSLPQV_ ENSG00000158526|ENST00000375151|TSR2 53.832793166522166 0.0964040679835549 3 {[TV]|[{I|L}S]}V{[SA]|[TG]}DD 7 7 27.091 0.0 0.0 2.371 0.0 0.0 0.0 452.2542099027957 452.2542099027957 1.5250686347846312 0.0 0.0 0.0 0 0.0 2.0 0.6923877696554315 0.0 {[TV]|[{I|L}S]}V{[SA]|[TG]}DD 2.371 - 391 1 1.169 52928.1 1.0 7575 5457 13018 HBL1_DMSO_200M_050219_1,13034 HBL1_DMSO_200M_050219_1,13034,TVVEDGSLPQV True True TVVEDGSLPQV 66.045003 572.298876941204 6741375.0 13018.0 ENSG00000158526|ENST00000375151|TSR2 6.037493705749512 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13035 66.05 271.0 425020.0 25 0 49439.0 24215 MAKIPVSL 8 123 429.75927735846216 857.5040017837243 2 429.7589294314384 MULTI CID FTMS 0 0 0 13018 246202.875 0.0246948486565487 7 -0.5848541259765625 17 Unmodified _MAKIPVSL_ ENSG00000126705|ENST00000673934|AHDC1 19.438996006549623 0.6237395211498085 3 {[DS]|[MA]|[CV]|TT}{I|L} 3 5 28.557 0.0 0.0 3.3302 0.0 0.0 0.0 539.3203829400999 539.3203829400999 12.69286866903428 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {[DS]|[MA]|[CV]|TT}{I|L} 3.3302 - 129 + 1 1.169 93244.4 1.0 7576 5457 13018 HBL1_DMSO_200M_050219_1,13035 HBL1_DMSO_200M_050219_1,13035,MAKIPVSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13036 66.061 611.0 319220.0 25 0 53362.0 + -1 YFIVTRQDY 9 178 602.7145885352209 1203.4146241372416 2 602.7145263552666 MULTI CID FTMS 0 0 0 13018 202414.59375 0.9010017649976286 2 -0.2137603759765625 18 Oxidation (M) _M(Oxidation (M))STWGCWQCS_ ENSG00000005059|ENST00000394650|MCUB 13.042465956692816 0.6287021003332052 3 PT{I|L}[HQ]{M(Oxidation (M))|F}NHV 9 -1 38.466 0.0 0.0 3.1964 0.0 0.0 111.82241329915412 0.0 111.82241329915412 0.0 16.69469995980699 0.0 0.0 0 0.0 0.0 0.0 0.6861818737241735 PT{I|L}[HQ]{M(Oxidation (M))|F}NHV 3.1964 - 2826 + 1 1.169 141250.7 1.0 7577 5457 13018 HBL1_DMSO_200M_050219_1,13036 HBL1_DMSO_200M_050219_1,13036,MSTWGCWQCS False False YFIVTRQDY 66.060689 602.714526355267 4673266.5 13018.0 ENSG00000005059|ENST00000394650|MCUB 0.099856453637282 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13037 66.072 623.0 182620.0 25 0 23557.0 44175 YLEGSCKDCI 10 138 565.7470191421427 1129.4794853510853 2 565.7470580935478 MULTI CID FTMS 0 0 0 13018 182963.3125 1.0 0 0.0 19 Unmodified _YLEGSCKDCI_ ENSG00000112029|ENST00000229758|FBXO5;nc|ENSG00000112029|Q9UKT4-2|FBXO5 22.736283301280096 0.4578556481593033 3 {[DA]|[EG]}Y{I|L}C(Carbamidomethyl (C)) 5 7 35.696 0.0 0.0 3.1604 0.0 0.0 0.0 504.211088704854 504.211088704854 22.931825014007217 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.0 0.0 {[DA]|[EG]}Y{I|L}C(Carbamidomethyl (C)) 3.1604 - 247 1 1.169 90374.2 1.0 7578 5457 13018 HBL1_DMSO_200M_050219_1,13037 HBL1_DMSO_200M_050219_1,13037,YLEGSCKDCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13038 66.084 686.0 66859.0 25 0 10113.0 + -1 SLCEMCMIDQL 11 88 708.2866149046816 0 708.2870361208916 PEAK CID FTMS 0 0 0 13018 179065.078125 1.0 0 0.0 20 2 Carbamidomethyl (C),Oxidation (M) _SLC(Carbamidomethyl (C))EM(Oxidation (M))C(Carbamidomethyl (C))MIDQL_ REV__ENSG00000145868|ENST00000340253|FBXO38;REV__ENST00000508326.5_1_5:147774339-147782111:+|nuORF;REV__ENST00000509411.5_1_5:147774339-147778706:+|nuORF;REV__nc|ENSG00000145868|Q6PIJ6-2|FBXO38;REV__nc|ENSG00000145868|Q6PIJ6-3|FBXO38 5.731851221503515 0.47618401536486 3 QE 2 -1 9.464 0.0 0.0 0.66904 0.0 0.0 945.3030749247944 209.1301668756469 1154.4332418004417 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QE 0.66904 - 43 + 1 1.169 38867.9 1.0 7579 5457 13018 HBL1_DMSO_200M_050219_1,13038 HBL1_DMSO_200M_050219_1,13038,SLCEMCMIDQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13040 66.088 7.2 10147000.0 25 0 768250.0 + 31162 RLPEAIEEV 9 69 528.290055908094 1054.565558882988 2 528.2905761599541 MULTI CID FTMS 0 0 0 13039 9033587.0 0.2661207181593243 6 -0.5081329345703125 1 Unmodified _RLPEAIEEV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 29.84058131909904 0.1515068451768857 3 A{I|L}EEV 5 4 45.701 0.0 0.0 4.3336 0.0 0.0 495.2801686017594 0.0 495.2801686017594 0.0 17.980690886789503 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + A{I|L}EEV 4.3336 + + 87 1 1.169 64273.1 1.0 7580 5458 13039 HBL1_DMSO_200M_050219_1,13040 HBL1_DMSO_200M_050219_1,13040,RLPEAIEEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13041 66.09 70.0 1112300.0 25 0 279930.0 + 19543 LFPVLGLVL 9 79 324.2158569364571 0 324.2156249880791 PEAK CID FTMS 0 0 0 13039 664006.125 0.4715943381502628 3 -0.2551727294921875 2 Unmodified _LFPVLGLVL_ REV__ENSG00000134760|ENST00000257192|DSG1 9.347437153973935 0.3197567915069932 3 {I|L}R 2 -1 16.454 0.0 0.0 2.5454 0.0 0.0 147.06796540678698 227.14068018131096 374.208645588098 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.3252574989159953 {I|L}R 2.5454 - 17 + 1 1.169 67429.5 1.0 7581 5458 13039 HBL1_DMSO_200M_050219_1,13041 HBL1_DMSO_200M_050219_1,13041,LFPVLGLVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13042 66.091 17.0 2228000.0 25 0 239570.0 + + 23089 VTIEDVQKL 9 63 522.8019628818669 0 522.8009521365166 PEAK CID FTMS 0 0 0 13039 1808582.25 1.0 0 0.0 3 Unmodified _LSLYEPPLL_ ENSG00000135069|ENST00000376588|PSAT1;nc|ENSG00000135069|Q9Y617-2|PSAT1;ENST00000439132.1_1_1:79520632-79520758:-|nuORF 16.942295170755138 0.2326366549411506 3 D 1 -1 13.979 0.0 0.0 1.3395 0.0 0.0 843.4728700002587 82.06699548892811 925.5398654891868 0.0 0.0 0.0 0.0 0 0.5 0.0 0.1989700043360188 0.0 D 1.3395 - 39 + 1 1.169 40838.0 1.0 7582 5458 13039 HBL1_DMSO_200M_050219_1,13042 HBL1_DMSO_200M_050219_1,13042,LSLYEPPLL False False VTIEDVQKL 66.090697 522.800952136517 8394980.0 13039.0 ENSG00000135069|ENST00000376588|PSAT1;;nc|ENSG00000135069|Q9Y617-2|PSAT1;;ENST00000439132.1_1_1:79520632-79520758:-|nuORF 1.69472802678744 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13043 66.092 42.0 969310.0 25 0 117770.0 33621 SIQWEERL 8 77 530.775573055867 1059.5365931785338 2 530.7759277224541 MULTI CID FTMS 0 0 0 13039 1087767.875 0.985049275991624 3 -0.2551727294921875 4 Unmodified _SIQWEERL_ ENSG00000106483|ENST00000436072|SFRP4 7.910154910731844 0.7763180056447161 3 {I|L}PVER{I|L} 6 4 29.614 0.0 0.0 2.795 0.0 0.0 334.0927504411064 0.0 334.0927504411064 0.0 18.35520279696244 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}PVER{I|L} 2.795 - 57 + 1 1.169 34933.3 1.0 7583 5458 13039 HBL1_DMSO_200M_050219_1,13043 HBL1_DMSO_200M_050219_1,13043,SIQWEERL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13044 66.094 94.0 753300.0 25 0 87291.0 27383 PIERGLRVI 9 58 351.5573572105204 1051.6502422317612 3 351.5572692751884 MULTI CID FTMS 0 0 0 13039 1032970.5625 0.835451373453868 2 -0.2197341918945312 5 Unmodified _PIERGLRVI_ ENSG00000147533|ENST00000357743|GOLGA7;ENST00000523128.1_1_8:41363387-41364622:+|nuORF 19.361941925380144 0.3125782356748823 3 {I|L}P{I|L}[WR]V 6 6 50.239 0.0 0.0 4.7772 0.0 0.0 0.0 284.1735933893188 284.1735933893188 40.506981269092606 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.7302046884880937 {I|L}P{I|L}[WR]V 4.7772 - 29 + 1 1.169 63823.7 1.0 7584 5458 13039 HBL1_DMSO_200M_050219_1,13044 HBL1_DMSO_200M_050219_1,13044,PIERGLRVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13045 66.097 160.0 513710.0 25 0 86574.0 + 14132 IAYDNIKVV 9 116 517.7981052258892 1033.5816575185784 2 517.7988769412041 MULTI CID FTMS 0 0 0 13039 501531.78125 0.1988017675587768 3 -0.2551727294921875 6 Unmodified _IAYDNIKVV_ ENSG00000105849|ENST00000222567|POLR1F 49.55428908609986 0.0413471690215031 3 {I|L}AYDN{I|L}KVV 9 0 + 72.635 0.0 0.0 7.0275 7.0275 90.855 0.0 0.0 0.0 26.42988965124037 11.706962271689749 11.706962271689749 9.208187539523747 0 1.2614393726401687 2.0 0.0 0.0 + + {I|L}AYDN{I|L}KVV;{I|L}AYDGG{I|L}KVV;{I|L}{M(Oxidation (M))|F}SDN{I|L}KVV;{I|L}{M(Oxidation (M))|F}SDGG{I|L}KVV;{I|L}{M(Oxidation (M))|F}[KP]A{[QV]|[N{I|L}]|[RA]|[KV]}[MT] 7.0275;6.1366;4.5537;3.6628;0.89165 +;-;-;-;- + 745 + 1 1.169 64907.4 1.0 7585 5458 13039 HBL1_DMSO_200M_050219_1,13045 HBL1_DMSO_200M_050219_1,13045,IAYDNIKVV True True IAYDNIKVV 66.097111 517.798876941204 29905824.0 13039.0 ENSG00000105849|ENST00000222567|POLR1F 6.589575131734212 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13046 66.1 163.0 367730.0 25 0 62235.0 + 44808 YPNKYESII 9 78 563.7927518217267 1125.570950710253 2 563.7928954958916 MULTI CID FTMS 0 0 0 13039 337815.46875 0.0861167822528016 -3 0.2615890502929687 7 Unmodified _YPNKYESII_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 41.8396318013385 0.0653578398400075 3 [NP]KYESY{I|L}{I|L} 9 2 + 57.853 0.0 0.0 5.1399 5.1399 56.107 0.0 0.0 0.0 0.0 12.98332479720628 0.0 0.0 0 0.7614393726401688 0.0 0.4247425010840047 0.3807196863200844 [NP]KYESY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}PYESY{I|L}{I|L};[NP]KYEYS{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}PYEYS{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[SA]|[TG]}{[NV]|[RG]}SY{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[SA]|[TG]}{[NV]|[RG]}YS{I|L}{I|L};[NP]KYES{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}PYES{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[R{M(Oxidation (M))|F}][KC]S{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}PY[MT]{M(Oxidation (M))|F}{I|L}{I|L} 5.1399;5.1399;5.0265;5.0265;4.154;4.0406;3.8894;3.8894;3.7277;3.474 -;-;-;-;-;-;-;-;-;- 424 1 1.169 53419.9 1.0 7586 5458 13039 HBL1_DMSO_200M_050219_1,13046 HBL1_DMSO_200M_050219_1,13046,YPNKYESII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13047 66.103 118.0 467740.0 25 0 56280.0 -1 NQCSDYNL 8 93 507.2047217736728 1012.3948906141457 2 507.2039062380791 MULTI CID FTMS 0 0 0 13039 338112.3125 0.7495898405011107 -1 0.07672119140625 8 Carbamidomethyl (C) _NQC(Carbamidomethyl (C))SDYNL_ ENSG00000105855|ENST00000222573|ITGB8;nc|ENSG00000105855|P26012-2|ITGB8 14.581692164780916 0.6954967302934248 3 {[QN]|[E{I|L}]|[KN]}{I|L} 3 -1 19.639 0.0 0.0 1.9398 0.0 0.0 0.0 654.1856779203982 654.1856779203982 0.8265059764113474 0.0 0.0 0.0 0 0.0 0.5686362358410126 0.0 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}{I|L} 1.9398 - 100 1 1.169 51617.1 1.0 7587 5458 13039 HBL1_DMSO_200M_050219_1,13047 HBL1_DMSO_200M_050219_1,13047,NQCSDYNL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13048 66.105 100.0 575440.0 25 0 20739.0 -1 0 75 917.431509586288 1832.848466239376 2 917.4314453005792 MULTI CID FTMS 0 0 0 13039 292653.09375 0.0768288700624633 -2 0.1699981689453125 9 3 [MN]PN{I|L}NEAQ 9 -1 44.892 0.0 0.0 2.4493 0.0 0.0 0.0 818.3775728815061 818.3775728815061 30.428258129818232 0.0 0.0 0.0 0 0.8059458123483889 1.3979400086720375 0.0 0.0 [MN]PN{I|L}NEAQ 2.4493 - 790 + 1 1.169 45444.1 1.0 7588 5458 13039 HBL1_DMSO_200M_050219_1,13048 HBL1_DMSO_200M_050219_1,13048, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13049 66.116 624.0 380250.0 25 0 22910.0 -1 RCHRRRRRCCC 11 149 866.9067123982009 1731.7988718632016 2 866.9062377810478 MULTI CID FTMS 0 0 0 13039 256629.0625 0.0134076453428441 -19 1.5041046142578125 10 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 3 [MN]PN{I|L}NADQRGMM{I|L}Q 15 -1 + 110.56 0.0 0.0 6.384 6.384 86.344 0.0 0.0 0.0 81.25275015105022 5.871031993034194 5.871031993034194 6.69006780958577 0 2.084121882396212 1.5228787452803376 0.0 2.668580043289144 [MN]PN{I|L}NADQRGMM{I|L}Q;[MN]PN{I|L}NWQRGMM{I|L}Q;[MN]PN{I|L}NADQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}NAD[AG]RGMM{I|L}Q;[MN]PGG{I|L}NADQRGMM{I|L}Q;[MN]PN{I|L}GGADQRGMM{I|L}Q;[MN]PN{I|L}NAD{I|L}{I|L}DMM{I|L}Q;[MN]NP{I|L}NADQRGMM{I|L}Q;[MN]PN{I|L}NWQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}GGWQRGMM{I|L}Q 6.384;5.9977;5.8713;5.8625;5.8625;5.8625;5.7239;5.6578;5.485;5.4751 -;-;-;-;-;-;-;-;-;- 18464 + 1 1.169 156878.6 1.0 7589 5458 13039 HBL1_DMSO_200M_050219_1,13049 HBL1_DMSO_200M_050219_1,13049,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13050 66.13 800.0 263440.0 25 0 20324.0 42325 VSYCPLRQES 10 233 394.5266931182353 1180.558249954906 3 394.5265991091728 MULTI CID FTMS 0 0 0 13039 198311.203125 1.0 0 0.0 11 Unmodified _VSYCPLRQES_ ENSG00000270806|ENST00000605587|C17orf50 8.745405648335112 0.6861838735306406 3 {[RE]|[WV]}D{I|L}T{I|L} 6 8 34.798 0.0 0.0 2.9476 0.0 0.0 0.0 450.12470422916255 450.12470422916255 12.621323395557894 0.0 0.0 0.0 0 0.0 0.0 0.6382104921644451 0.0 {[RE]|[WV]}D{I|L}T{I|L} 2.9476 - 870 + 1 1.169 165687.3 0.9399999976158142 7590 5458 13039 HBL1_DMSO_200M_050219_1,13050 HBL1_DMSO_200M_050219_1,13050,VSYCPLRQES False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13051 66.141 637.0 245270.0 25 0 16491.0 -1 0 157 599.3071901881399 1794.8997411646196 3 599.6426269412041 MULTI CID FTMS 0 0 0 13039 179612.515625 0.623745260270048 -3 0.2615890502929687 12 3 [H{I|L}][NP]H{M(Oxidation (M))|F}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}H{I|L}Q 14 -1 + 60.212 0.0 0.0 3.3546 3.3546 73.245 0.0 0.0 0.0 3.344537511509316 0.0 0.0 3.344537511509316 0 0.7742275032520141 1.6989700043360187 0.0 1.079689690656103 [H{I|L}][NP]H{M(Oxidation (M))|F}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}H{I|L}Q;[{I|L}P]NH{[C(Carbamidomethyl (C))G]|[NC]}EM{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}H{I|L}K;[{I|L}P]NHH{M(Oxidation (M))|F}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}H{I|L}Q;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H{I|L}{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V{M(Oxidation (M))|F}H{[DS]|[MA]|[CV]|TT}{I|L}Q;[{I|L}P]NH[WC(Carbamidomethyl (C))]M{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}H{I|L}K;[{I|L}T]QQQ{M(Oxidation (M))|F}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP]{I|L}H{[C(Carbamidomethyl (C))G]|[NC]}EM{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}H{I|L}K;[{I|L}P]NH{I|L}TW[YN]{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}HH{M(Oxidation (M))|F}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}H{I|L}Q;[{I|L}T]Q[KQ]{M(Oxidation (M))|F}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}H{I|L}Q 3.3546;3.1683;3.131;2.9479;2.7955;2.7832;2.7651;2.755;2.7278;2.6155 -;-;-;-;-;-;-;-;-;- 2802 1 1.169 122544.7 1.0 7591 5458 13039 HBL1_DMSO_200M_050219_1,13051 HBL1_DMSO_200M_050219_1,13051, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13052 66.155 800.0 392830.0 25 0 21645.0 + 5606 DPAKFISV 8 271 438.7450985753597 0 438.7450134158134 PEAK CID FTMS 0 0 0 13039 150857.296875 0.8674557043433041 -3 0.2615890502929687 13 Unmodified _DPAKFISV_ ENSG00000142751|ENST00000374135|GPN2 70.33199760932243 0.0027536167982476 3 S{I|L}{M(Oxidation (M))|F}KA 5 7 24.976 0.0 0.0 2.8528 0.0 0.0 117.07648757865066 209.0571230524047 326.1336106310554 0.0 0.0 0.0 0.0 0 1.0941876774005248 0.0 0.2887254899964357 0.0 S{I|L}{M(Oxidation (M))|F}KA 2.8528 - 813 + 1 1.169 240037.8 0.8999999761581421 7592 5458 13039 HBL1_DMSO_200M_050219_1,13052 HBL1_DMSO_200M_050219_1,13052,DPAKFISV True True DPAKFISV 66.154592 438.745013415813 1942852.25 13039.0 ENSG00000142751|ENST00000374135|GPN2 7.268522580464681 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13053 66.157 134.0 745720.0 25 0 68576.0 + 135 AALEEFSRV 9 167 511.2691144850707 1020.5236760369414 2 511.2697021365166 MULTI CID FTMS 0 0 0 13039 138095.65625 0.0302972307218756 6 -0.5081329345703125 14 Unmodified _AALEEFSRV_ ENSG00000173473|ENST00000254480|SMARCC1 39.94969957227396 0.0757326808254658 3 AA{I|L}EEAYRV 9 2 + 53.51 0.0 0.0 5.2434 5.2434 75.056 0.0 0.0 0.0 25.7306842758112 4.1498647410857785 4.1498647410857785 1.148481219398079 0 0.6677353201839438 1.0969100130080565 0.6989700043360187 0.0 AA{I|L}EEAYRV;AA{I|L}EN{[HG]|PP}NPV;AA{I|L}EN{[HG]|PP}PNV;AA{I|L}EGG{[HG]|PP}NPV;AA{I|L}EN{[HG]|PP}PGGV;AA{I|L}EN{[HG]|PP}GGPV;AA{I|L}EGG{[HG]|PP}PNV;AA{I|L}EN[YK]NV;AA{I|L}E[Y{I|L}]WGV;AA{I|L}EN[YK]GGV 5.2434;5.1309;4.6927;4.2328;3.9643;3.8598;3.7947;3.6796;3.6347;3.3199 -;-;-;-;-;-;-;-;-;- 2391 + 1 1.169 81571.0 1.0 7593 5458 13039 HBL1_DMSO_200M_050219_1,13053 HBL1_DMSO_200M_050219_1,13053,AALEEFSRV True True AALEEFSRV 66.157315 511.269702136517 23177102.0 13039.0 ENSG00000173473|ENST00000254480|SMARCC1 6.063077926635742 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13054 66.172 753.0 148980.0 25 0 12420.0 + 14539 IGYPTVASV 9 121 906.4937112305088 905.4864347639088 1 906.4977905154228 MULTI CID FTMS 0 0 0 13039 122282.640625 0.392809144709725 -10 0.704010009765625 15 Unmodified _IGYPTVASV_ ENSG00000089157|ENST00000392514|RPLP0;nc|ENSG00000089157|P05388-2|RPLP0 50.855029805455786 0.0384952370514206 3 S{I|L}ASV 5 6 44.319 0.0 0.0 4.8945 0.0 0.0 430.2220936505875 0.0 430.2220936505875 0.0 25.1546082689102 0.0 0.0 0 0.0 0.0 1.5356668758921828 0.0 S{I|L}ASV 4.8945 - 911 1 1.169 80951.7 1.0 7594 5458 13039 HBL1_DMSO_200M_050219_1,13054 HBL1_DMSO_200M_050219_1,13054,IGYPTVASV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13055 66.183 666.0 190430.0 25 0 18872.0 -1 FLRVSKMRLS 10 143 626.8651284044649 1251.7157038757298 2 626.8625366091728 MULTI CID FTMS 0 0 0 13039 121749.1875 0.8957182496684142 -1 0.07672119140625 16 Oxidation (M) _FLRVSKM(Oxidation (M))RLS_ ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213 14.838274106304384 0.5985701837916485 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASVSTS[K{I|L}]TV 12 -1 + 47.265 0.0 0.0 3.776 3.776 73.62 0.0 0.0 0.0 6.259325529902036 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.3807196863200844 0.0 0.6549471895720985 0.4247425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASVSTS[K{I|L}]TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASVSTS[K{I|L}]S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AWSTS[K{I|L}]TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AWSTS[K{I|L}]S{I|L};[PA]{I|L}[HK]TSVSA{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASVSTV{I|L}T[KS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASVSTV[KT]TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASVSTS{I|L}{I|L}[KS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASVSTV[KT]S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AWSTV{I|L}T[KS] 3.776;3.5355;3.4883;3.2478;3.1958;3.0194;2.9909;2.7876;2.7504;2.7317 -;-;-;-;-;-;-;-;-;- 679 + 1 1.169 100441.8 1.0 7595 5458 13039 HBL1_DMSO_200M_050219_1,13055 HBL1_DMSO_200M_050219_1,13055,FLRVSKMRLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13056 66.186 146.0 506630.0 25 0 29757.0 + -1 VPMLVLVP 8 123 442.2690793183421 0 442.2680847048759 PEAK CID FTMS 0 0 0 13039 127902.765625 0.453551935881767 -3 0.2615890502929687 17 Oxidation (M) _VPM(Oxidation (M))LVLVP_ REV__ENST00000565644.5_1_16:87865506-87865632:-|nuORF 11.114462752807354 0.5290325060821968 3 E{I|L} 2 -1 7.0783 0.0 0.0 0.80206 0.0 0.0 197.12005146020232 440.2625216119751 637.3825730721774 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L} 0.80206 - 203 + 1 1.169 60130.2 1.0 7596 5458 13039 HBL1_DMSO_200M_050219_1,13056 HBL1_DMSO_200M_050219_1,13056,VPMLVLVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13057 66.192 311.0 391890.0 25 0 35934.0 -1 ISCCVTNV 8 168 476.71342681874097 951.412300704282 2 476.7138549685478 MULTI CID FTMS 0 0 0 13039 105440.796875 0.3353714246637594 -1 0.07672119140625 18 2 Carbamidomethyl (C) _ISC(Carbamidomethyl (C))C(Carbamidomethyl (C))VTNV_ ENST00000517352.1_1_8:119945418-119945478:-|nuORF 14.581692164780916 0.6954967302934248 3 {[{M(Oxidation (M))|F}C]|[YS]}EPQES{I|L} 8 -1 {[{M(Oxidation (M))|F}C]|[YS]}EPQE + + 19.706 16.676 2.2742 2.0713 2.0713 48.89 0.0 0.0 0.0 0.0 -2.7718540332845087 -2.7718540332845087 0.0 0 0.0 0.0 0.3252574989159953 0.0 {[{M(Oxidation (M))|F}C]|[YS]}EPQES{I|L} 2.0713 - 914 + 1 1.169 93635.9 1.0 7597 5458 13039 HBL1_DMSO_200M_050219_1,13057 HBL1_DMSO_200M_050219_1,13057,ISCCVTNV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13058 66.205 778.0 108360.0 25 0 8293.7 + 37065 TGGTSGYL 8 104 755.3599570507139 754.3526805841138 1 756.4621459841728 MULTI CID FTMS 0 0 0 -1 0 19 Unmodified _TGGTSGYL_ REV__ENSG00000126773|ENST00000406854|PCNX4 5.230669730166228 0.792582437072536 3 [EP]YA{I|L}Y 6 -1 + 30.08 0.0 0.0 3.9876 3.9876 83.747 0.0 0.0 0.0 10.79676564518343 1.307257868657416 1.307257868657416 17.104607071082 0 0.5397644799392252 1.5228787452803376 0.0 0.0 [EP]YA{I|L}Y;[DN]G{I|L}V[HT];[DN]G{I|L}[HS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[EP]{I|L}Y;[DN]AVV[HT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[EP]Y{I|L};[RH]A{M(Oxidation (M))|F}[QP];[DN]GV{I|L}[HT];[DN]AV[HS]{I|L};[DN]GV[HT]{I|L} 3.9876;1.7201;1.3211;1.114;1.0876;0.86596;0.82386;0.79353;0.68856;0.39447 -;-;-;-;-;-;-;-;-;- 967 1 1.169 67819.0 1.0 7598 5458 13039 HBL1_DMSO_200M_050219_1,13058 HBL1_DMSO_200M_050219_1,13058,TGGTSGYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13059 66.22 800.0 267050.0 25 0 30089.0 + 21573 LPKLARVI 8 189 303.8797575367842 0 303.8792602419853 PEAK CID FTMS 0 0 0 13039 99143.40625 0.2871891869628366 -7 0.5121078491210938 20 Unmodified _LPKLARVI_ ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL 12.240655878213236 0.5163724469666456 3 A 1 7 3.9794 0.0 0.0 0.65694 0.0 0.0 148.4430623909281 383.2397860162719 531.6828484072 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.65694 + + 12 + 1 1.169 172651.7 0.5600000023841858 7599 5458 13039 HBL1_DMSO_200M_050219_1,13059 HBL1_DMSO_200M_050219_1,13059,LPKLARVI False True LPKLARVI 66.220455 303.879260241985 3681601.5 13039.0 nc|ENSG00000239900|P30566-2|ADSL;;ENSG00000239900|ENST00000623063|ADSL -0.1702464371919632 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13061 66.225 5.4 25200000.0 25 0 5110500.0 + 44598 YPFKPPKI 8 82 330.5321852651292 988.5747263955876 3 330.5321227908134 MULTI CID FTMS 0 0 0 13060 8948197.0 0.5115547778610278 7 -0.5075531005859375 1 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 36.04419817259434 0.3004715606373109 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 58.797 0.0 0.0 5.9477 5.9477 80.047 0.0 0.0 0.0 29.420080530223128 2.8082660957569345 2.8082660957569345 2.8082660957569345 0 0.2742275032520141 1.3010299956639813 0.0 0.2134679910804404 + + YP{M(Oxidation (M))|F}KPPK{I|L};YP{M(Oxidation (M))|F}KPP{I|L}K;Y{I|L}MKPPK{I|L};Y{I|L}MKPP{I|L}K 5.9477;5.6636;4.5323;4.2482 +;-;-;- + 236 + 1 1.177 112138.9 1.0 7600 5459 13060 HBL1_DMSO_200M_050219_1,13061 HBL1_DMSO_200M_050219_1,13061,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13062 66.226 31.0 1284500.0 25 0 104200.0 + 21742 LPMDYVQRV 9 58 560.7941034205686 1119.5736539079371 2 560.7947875857353 MULTI CID FTMS 0 0 0 13060 1338075.125 0.2310736602646335 2 -0.118133544921875 2 Unmodified _LPMDYVQRV_ ENSG00000179115|ENST00000314606|FARSA;nc|ENSG00000179115|Q9Y285-2|FARSA 19.62595529434964 0.305431704817896 3 {I|L}PMDYVQ[RV] 9 0 + 78.421 0.0 0.0 7.0046 7.0046 86.243 0.0 0.0 0.0 67.61947817248647 5.642492736872597 5.642492736872597 4.771212547196626 0 0.3807196863200844 2.0 0.0 0.0 + + {I|L}PMDYVQ[RV];{I|L}PMDVYQ[RV];{I|L}PMVDYQ[RV];{I|L}PMDYV[AG][RV];{I|L}PVMDYQ[RV];{I|L}PMDVY[AG][RV];{I|L}PMVDY[AG][RV];{I|L}PVMDY[AG][RV];{I|L}VPMDYQ[RV];{I|L}VPMDY[AG][RV] 7.0046;6.5784;6.3095;6.1821;5.8834;5.7559;5.4871;5.0609;3.488;2.6656 +;-;-;-;-;-;-;-;-;- + 157 + 1 1.177 36579.6 1.0 7601 5459 13060 HBL1_DMSO_200M_050219_1,13062 HBL1_DMSO_200M_050219_1,13062,LPMDYVQRV False True LPMDYVQRV 66.226094 560.794787585735 112193840.0 13060.0 ENSG00000179115|ENST00000314606|FARSA;;nc|ENSG00000179115|Q9Y285-2|FARSA 7.070083141326904 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13063 66.227 18.0 2869000.0 25 0 435360.0 + 43997 YIDPSGFVKA 10 63 548.7871573969668 1095.5597618607335 2 548.7877685427666 MULTI CID FTMS 0 0 0 13060 2253067.75 0.4399253438094768 -1 0.1370391845703125 3 Unmodified _YIDPSGFVKA_ ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48;nc|ENSG00000090686|Q86UV5-8|USP48 36.506200033944 0.1944608063770638 3 [Y{I|L}]DP[YQ]V[KA] 9 3 + 49.292 0.0 0.0 4.4993 4.4993 84.758 0.0 0.0 0.0 36.9849078913372 1.2766548195783258 1.2766548195783258 14.168701871565666 0 0.805462187404089 2.0 0.4247425010840047 0.2887254899964357 [Y{I|L}]DP[YQ]V[KA];[Y{I|L}]NPD[KA][Y{I|L}];[Y{I|L}]DPN[KA][Y{I|L}];[Y{I|L}]GGPD[KA][Y{I|L}];[Y{I|L}]YY[KA][Y{I|L}];[PS]G{M(Oxidation (M))|F}DV[KA][Y{I|L}];[PS]G{M(Oxidation (M))|F}VD[KA][Y{I|L}] 4.4993;3.206;2.9934;2.3655;2.0907;1.165;0.89028 -;-;-;-;-;-;- 111 + 1 1.177 43783.1 1.0 7602 5459 13060 HBL1_DMSO_200M_050219_1,13063 HBL1_DMSO_200M_050219_1,13063,YIDPSGFVKA False True YIDPSGFVKA 66.227273 548.787768542767 53342388.0 13060.0 nc|ENSG00000090686|Q86UV5-8|USP48;;ENSG00000090686|ENST00000308271|USP48;;nc|ENSG00000090686|Q86UV5-7|USP48;;nc|ENSG00000090686|Q86UV5-2|USP48;;nc|ENSG00000090686|Q86UV5-4|USP48;;nc|ENSG00000090686|Q86UV5-3|USP48 7.401617050170898 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13064 66.228 26.0 2401900.0 25 0 590580.0 + 32374 RYQDAIRVF 9 71 584.318053543116 1166.621554153032 2 584.3174316287041 MULTI CID FTMS 0 0 0 13060 1577233.5 0.7692980414215664 -1 0.1370391845703125 4 Unmodified _RYQDAIRVF_ ENSG00000100129|ENST00000652021|EIF3L;ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L 28.49450938151212 0.1686335738423394 3 D[NS]VE 5 7 25.445 0.0 0.0 2.1811 0.0 0.0 604.3707175817196 0.0 604.3707175817196 0.0 -3.0102999566398125 -3.0102999566398125 0.0 0 0.4247425010840047 0.0 0.5 0.0 D[NS]VE 2.1811 - 21 1 1.177 52271.2 1.0 7603 5459 13060 HBL1_DMSO_200M_050219_1,13064 HBL1_DMSO_200M_050219_1,13064,RYQDAIRVF False True RYQDAIRVF 66.228452 584.317431628704 39759544.0 13060.0 ENST00000457262.1_1_10:43062145-43062928:+|nuORF;;nc|ENSG00000100129|Q9Y262-2|EIF3L;;ENSG00000100129|ENST00000652021|EIF3L 7.917785962422688 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13065 66.23 33.0 2289400.0 25 0 483450.0 + 38543 TSSKKSGL 8 104 404.2334507410288 806.4523485488577 2 404.2329284548759 MULTI CID FTMS 0 0 0 13060 1524684.5 0.6799342222618623 -1 0.1370391845703125 5 Unmodified _TSSKKSGL_ REV__ENST00000511058.1_1_3:123385915-123401122:-|nuORF 1.844237919475145 0.8131380230371302 3 V 1 -1 7.3464 0.0 0.0 0.91095 0.0 0.0 403.2410581209264 301.1295260065063 704.3705841274327 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V 0.91095 - 1 + 1 1.177 64348.7 1.0 7604 5459 13060 HBL1_DMSO_200M_050219_1,13065 HBL1_DMSO_200M_050219_1,13065,TSSKKSGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13066 66.231 17.0 847170.0 25 0 90389.0 + 12037 GQDEPLIHV 9 43 504.2622852368165 1006.5100175404332 2 504.2635070681572 MULTI CID FTMS 0 0 0 13060 1585923.625 0.6827603638952192 1 -0.0826950073242187 6 Unmodified _GQDEPLIHV_ ENSG00000157778|ENST00000288607|PSMG3 11.640296217721598 0.521594087909532 3 {[QG]|[NA]}D 3 6 6.7166 0.0 0.0 0.66732 0.0 0.0 0.0 703.3803843219362 703.3803843219362 -0.7306401783911909 0.0 -0.7306401783911909 0.0 0 0.0 0.0 0.0 0.3494850021680094 + {[QG]|[NA]}D 0.66732 + + 12 1 1.177 19768.6 1.0 7605 5459 13060 HBL1_DMSO_200M_050219_1,13066 HBL1_DMSO_200M_050219_1,13066,GQDEPLIHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13067 66.233 83.0 504160.0 25 0 67312.0 17548 KPPAEVLA 8 74 412.7463770871613 823.4782012411226 2 412.7460510134697 MULTI CID FTMS 0 0 0 13060 727123.8125 0.5336206315300865 2 -0.118133544921875 7 Unmodified _KPPAEVLA_ ENST00000216129.6_1_22:43563239-43563701:-|nuORF 4.3292370932331545 0.7980541185046766 3 {M(Oxidation (M))|F} 1 8 3.9794 0.0 0.0 0.48324 0.0 0.0 607.3514139870196 66.03566156558827 673.3870755526078 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.48324 - 9 + 1 1.177 40373.5 1.0 7606 5459 13060 HBL1_DMSO_200M_050219_1,13067 HBL1_DMSO_200M_050219_1,13067,KPPAEVLA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13068 66.234 54.0 1848000.0 25 0 134750.0 + 30147 QVPDDLPNV 9 113 498.75337855656295 995.492204179926 2 498.7534362673759 MULTI CID FTMS 0 0 0 13060 678375.4375 0.2399370204412769 -2 0.2137603759765625 8 Unmodified _QVPDDLPNV_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 26.88365393820708 0.1891292719743517 3 [DP]D{I|L}QV 6 4 31.151 0.0 0.0 3.1292 0.0 0.0 0.0 325.1505236452088 325.1505236452088 5.891001793362474 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.3494850021680094 0.0 [DP]D{I|L}QV 3.1292 - 467 1 1.177 78805.6 1.0 7607 5459 13060 HBL1_DMSO_200M_050219_1,13068 HBL1_DMSO_200M_050219_1,13068,QVPDDLPNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13069 66.236 74.0 866760.0 25 0 167420.0 + 1943 AMLIAATVPA 10 81 479.2771095849216 956.5396662366433 2 479.2774536013603 MULTI CID FTMS 0 0 0 13060 620262.125 0.3460809332313291 -1 0.1370391845703125 9 Unmodified _AMLIAATVPA_ REV__ENST00000392357.1_1_17:80012338-80013241:+|nuORF 3.5964929083625545 0.7100006075494749 3 V 1 -1 10.181 0.0 0.0 1.0644 0.0 0.0 839.460341445919 0.0 839.460341445919 0.0 0.4271509766231318 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0644 + + 13 + 1 1.177 57015.3 1.0 7608 5459 13060 HBL1_DMSO_200M_050219_1,13069 HBL1_DMSO_200M_050219_1,13069,AMLIAATVPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13070 66.238 89.0 1855400.0 25 0 109800.0 + -1 PTVPTVPTV 9 130 910.4224863885926 1818.830419843985 2 910.9240600466728 MULTI CID FTMS 0 0 0 13060 612085.4375 0.1075769353324384 4 -0.340576171875 10 ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42 3 [MN][NP]{I|L}NAD[HC]DRN{I|L} 14 -1 67.581 0.0 0.0 3.7156 0.0 0.0 0.0 208.0731447809204 208.0731447809204 44.40257377045383 0.0 0.0 0.0 0 0.2614393726401688 1.5228787452803376 0.0 1.7376954943324543 [MN][NP]{I|L}NAD[HC]DRN{I|L} 3.7156 - 6769 + 1 1.177 110970.1 1.0 7609 5459 13060 HBL1_DMSO_200M_050219_1,13070 HBL1_DMSO_200M_050219_1,13070, False False PTVPTVPTV 66.237783 910.4231 21866474.0 13060.0 ENSG00000126254|ENST00000262633|RBM42;;nc|ENSG00000126254|Q9BTD8-2|RBM42;;nc|ENSG00000126254|Q9BTD8-3|RBM42;;nc|ENSG00000126254|Q9BTD8-4|RBM42 2.43201677997907 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13071 66.239 59.0 1189500.0 25 0 101730.0 + + -1 RVPDGMVGL 9 96 472.2690951528654 942.5236373725309 2 472.2698547244072 MULTI CID FTMS 0 0 0 13060 396864.125 0.1059533462785728 9 -0.6682586669921875 11 Carbamidomethyl (C) _LTPC(Carbamidomethyl (C))IAVGL_ ENSG00000088247|ENST00000600480|KHSRP;nc|ENSG00000088247|Q92945|KHSRP 14.581692164780916 0.4419739649577144 3 {NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}RVVV 8 -1 + 21.713 0.0 0.0 2.3037 2.3037 75.578 0.0 0.0 0.0 1.156210489653482 1.535310452627641 1.156210489653482 7.087298416251752 0 0.3252574989159953 0.958607314841775 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}RVVV;[VS]P{[MG]|[TS]}RVVV;{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}[VG]VVV;{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}[PS][R{I|L}];[VS]P{[MG]|[TS]}[VG]VVV;[VS]P{[NV]|[RG]}MVVV;[VS]P{[MG]|[TS]}[PS][R{I|L}] 2.3037;1.5517;1.321;0.95304;0.57475;0.38102;0.20109 -;-;-;-;-;-;- 316 1 1.177 59953.7 1.0 7610 5459 13060 HBL1_DMSO_200M_050219_1,13071 HBL1_DMSO_200M_050219_1,13071,LTPCIAVGL False False RVPDGMVGL 66.239246 472.269854724407 53914506.0 13060.0 ENSG00000088247|ENST00000600480|KHSRP;;nc|ENSG00000088247|Q92945|KHSRP 6.691099325815837 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13072 66.241 73.0 890920.0 25 0 174710.0 -1 0 68 902.426695344373 0 902.4254028201104 PEAK CID FTMS 0 0 0 13060 369387.6875 0.3928612973389912 -2 0.2137603759765625 12 3 PN{I|L}NEEQ 7 -1 49.571 0.0 0.0 2.7496 0.0 0.0 245.08411074387283 730.3665865533811 975.450697297254 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.805462187404089 PN{I|L}NEEQ 2.7496 - 312 + 1 1.177 49558.9 1.0 7611 5459 13060 HBL1_DMSO_200M_050219_1,13072 HBL1_DMSO_200M_050219_1,13072, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13073 66.244 146.0 675220.0 25 0 104200.0 -1 0 103 641.949922944756 1922.827939434468 3 642.2833129763603 MULTI CID FTMS 0 0 0 13060 380881.1875 0.6098922027539379 -1 0.1370391845703125 13 3 [Q{I|L}]HEG{[MS]|[{M(Oxidation (M))|F}A]}E[NS]YN 12 -1 25.12 0.0 0.0 1.3064 0.0 0.0 0.0 530.2260928752256 530.2260928752256 7.430468681702965 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 1.2856668758921828 [Q{I|L}]HEG{[MS]|[{M(Oxidation (M))|F}A]}E[NS]YN 1.3064 - 516 1 1.177 78065.8 1.0 7612 5459 13060 HBL1_DMSO_200M_050219_1,13073 HBL1_DMSO_200M_050219_1,13073, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13074 66.247 177.0 1238500.0 25 0 125110.0 + + 11858 RVIGTLLGT 9 186 465.2924653702253 928.5703778072508 2 465.2925598025322 MULTI CID FTMS 0 0 0 13060 303993.4375 0.1459857202233725 3 -0.2385406494140625 14 Unmodified _GLSLLRIGT_ ENST00000528653.1_1_11:8009127-8013479:+|nuORF;ENSG00000175390|ENST00000651655|EIF3F 21.53697664764585 0.2571576504437394 3 {[SA]|[TG]}{I|L}VR{I|L}{I|L}GT 9 -1 + 68.453 0.0 0.0 7.3718 7.3718 88.772 0.0 0.0 0.0 6.368220975871736 16.478174818886373 6.368220975871736 6.368220975871736 0 0.6694451763165201 0.4089353929735008 0.3054621874040891 0.0 {[SA]|[TG]}{I|L}VR{I|L}{I|L}GT;[{I|L}A]SVR{I|L}{I|L}GT;{[TV]|[{I|L}S]}AVR{I|L}{I|L}GT;[{I|L}T]GVR{I|L}{I|L}GT;{[VA]|[{I|L}G]}TVR{I|L}{I|L}GT;[VS][{I|L}A]R{I|L}{I|L}GT;{I|L}{I|L}[SG]R{I|L}{I|L}GT;{[SA]|[TG]}{I|L}V[K{I|L}]{I|L}W;[{I|L}A]SV[K{I|L}]{I|L}W;{[TV]|[{I|L}S]}AV[K{I|L}]{I|L}W 7.3718;6.686;6.3188;5.619;5.6063;4.5696;4.1933;3.2808;2.595;2.2277 -;-;-;-;-;-;-;-;-;- 738 1 1.177 167069.7 1.0 7613 5459 13060 HBL1_DMSO_200M_050219_1,13074 HBL1_DMSO_200M_050219_1,13074,GLSLLRIGT False False RVIGTLLGT 66.24734 465.292559802532 20212898.0 13060.0 ENST00000528653.1_1_11:8009127-8013479:+|nuORF;;ENSG00000175390|ENST00000651655|EIF3F 0.4679440061251322 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13075 66.252 223.0 819400.0 25 0 127050.0 + 3028 AVLDLVHSA 9 135 462.7618255664855 923.509098199771 2 462.7606994509697 MULTI CID FTMS 0 0 0 13060 232456.9375 0.0775456338432472 -5 0.4766464233398437 15 Unmodified _AVLDLVHSA_ ENSG00000142544|ENST00000421832|CTU1;ENST00000598755.1_1_19:52104581-52104959:+|nuORF 85.35673624503755 0.0162188719545379 3 {[VA]|[{I|L}G]}{I|L}D{I|L}VH{[SA]|[TG]} 9 0 + 77.562 0.0 0.0 8.3986 8.3986 85.894 0.0 0.0 0.0 27.147642715192504 2.578370870638452 2.578370870638452 2.578370870638452 0 0.9361818737241736 2.0 2.06295299324845 0.0 + + {[VA]|[{I|L}G]}{I|L}D{I|L}VH{[SA]|[TG]};{[VA]|[{I|L}G]}{I|L}D{I|L}V{[SA]|[TG]}H;{NN|[MP]|[D{I|L}]|[EV]}VH{I|L}SAG{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}VHSAG{I|L};{[VA]|[{I|L}G]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[YR]V;{[VA]|[{I|L}G]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[HA]P{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}HSAG{I|L};{[VA]|[{I|L}G]}{I|L}D[HS]{I|L}G{I|L};{[VA]|[{I|L}G]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[PA]H;[HV]{I|L}D{I|L}SAG{I|L} 8.3986;8.1194;3.7836;3.5302;3.4785;3.2825;3.267;3.2401;3.1799;3.1234 +;-;-;-;-;-;-;-;-;- + 1171 + 1 1.177 143530.0 1.0 7614 5459 13060 HBL1_DMSO_200M_050219_1,13075 HBL1_DMSO_200M_050219_1,13075,AVLDLVHSA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13076 66.263 659.0 504030.0 25 0 45028.0 + 9977 FPHHLQEYI 9 221 592.2984816514041 1182.5824103696082 2 592.2987548708916 MULTI CID FTMS 0 0 0 13060 207915.5 0.3093847428258995 -2 0.2137603759765625 16 Unmodified _FPHHLQEYI_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 78.14939416004806 0.0179651292570206 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH{I|L}QEY{I|L} 9 0 + 74.818 0.0 0.0 6.3267 6.3267 82.496 0.0 0.0 0.0 3.416375079047498 14.97302484056646 3.416375079047498 3.416375079047498 0 1.274227503252014 1.2218487496163564 1.4124379954164592 0.6382104921644451 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH{I|L}QEY{I|L};[H{I|L}]HQEP{M(Oxidation (M))|F}Y{I|L};[H{I|L}]QHEP{M(Oxidation (M))|F}Y{I|L};HH{I|L}QEP{M(Oxidation (M))|F}Y{I|L};[H{I|L}]QEHP{M(Oxidation (M))|F}Y{I|L};[H{I|L}]HQPE{M(Oxidation (M))|F}Y{I|L};[H{I|L}]QHPE{M(Oxidation (M))|F}Y{I|L};HH{I|L}QPE{M(Oxidation (M))|F}Y{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]EP{M(Oxidation (M))|F}Y{I|L};[H{I|L}]HPQE{M(Oxidation (M))|F}Y{I|L} 6.3267;6.0378;5.9708;5.9256;5.8219;5.7832;5.7163;5.6711;5.5081;5.4467 +;-;-;-;-;-;-;-;-;- + 11204 1 1.177 242505.0 1.0 7615 5459 13060 HBL1_DMSO_200M_050219_1,13076 HBL1_DMSO_200M_050219_1,13076,FPHHLQEYI True True FPHHLQEYI 66.263021 592.298754870892 4424637.5 13060.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 4.540064811706543 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13077 66.275 667.0 229040.0 25 0 16769.0 + + -1 FYFTSSSVNSSA 12 198 648.7975333496897 1295.5805137661794 2 648.7089111208916 MULTI CID FTMS 0 0 0 13060 46613.73046875 0.2514851665012594 4 -0.340576171875 17 Carbamidomethyl (C) _SSLCEERLC(Carbamidomethyl (C))SL_ ENSG00000147419|ENST00000356537|CCDC25 11.494710602746466 0.7960433852372589 3 {I|L} 1 -1 12.764 0.0 0.0 0.98521 0.0 0.0 1164.485647898795 0.0 1164.485647898795 0.0 1.4126910626869815 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.98521 + + 447 + 1 1.177 113372.5 1.0 7616 5459 13060 HBL1_DMSO_200M_050219_1,13077 HBL1_DMSO_200M_050219_1,13077,SSLCEERLCSL False False FYFTSSSVNSSA 66.274637 648.2079 1111283.5 13060.0 ENSG00000147419|ENST00000356537|CCDC25 2.57662828763326 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13078 66.287 722.0 714240.0 25 0 46790.0 + 33926 VPLRVSPYV 9 295 514.8087706704728 1027.6029884077454 2 515.3106567263603 MULTI CID FTMS 0 0 0 13060 205451.078125 0.5141535780190176 1 -0.0826950073242187 18 Unmodified _SLGLQRLEL_ ENSG00000068079|ENST00000415816|IFI35;nc|ENSG00000068079|P80217-2|IFI35 13.90604991867851 0.4602628045680013 3 [VP][R{I|L}]SPVY 8 8 26.934 0.0 0.0 2.621 0.0 0.0 0.0 113.05600079724698 113.05600079724698 2.712665962669835 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9476212463643424 0.0 [VP][R{I|L}]SPVY 2.621 - 2874 1 1.177 400278.9 1.0 7617 5459 13060 HBL1_DMSO_200M_050219_1,13078 HBL1_DMSO_200M_050219_1,13078,SLGLQRLEL False False VPLRVSPYV 66.287167 515.31065672636 3164241.5 13060.0 ENSG00000068079|ENST00000415816|IFI35;;nc|ENSG00000068079|P80217-2|IFI35 4.036969184875488 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13079 66.301 800.0 616710.0 25 0 49877.0 + 13997 IAAAQALP 8 309 377.7252297616699 0 377.7248718142509 PEAK CID FTMS 0 0 0 13060 189814.0625 0.283310200100058 -1 0.1370391845703125 19 Unmodified _IAAAQALP_ REV__ENSG00000099715|ENST00000698851|PCDH11Y;REV__ENSG00000102290|ENST00000682573|PCDH11X;REV__nc|ENSG00000099715|Q9BZA8|PCDH11Y;REV__nc|ENSG00000102290|Q9BZA7-3|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-4|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-8|PCDH11X 2.889219685676258 0.5898224805723975 3 {M(Oxidation (M))|F} 1 -1 9.877 0.0 0.0 1.3109 0.0 0.0 377.2511899551181 226.1282900445922 603.3794799997103 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3109 - 23 + 1 1.177 383456.2 0.8299999833106995 7618 5459 13060 HBL1_DMSO_200M_050219_1,13079 HBL1_DMSO_200M_050219_1,13079,IAAAQALP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13080 66.303 28.0 1221900.0 25 0 103140.0 + + -1 RLLENMTEV 9 70 552.2557817991736 1102.4970106651472 2 552.7565795779228 MULTI CID FTMS 0 0 0 13060 185971.9375 0.206338444725059 -2 0.2137603759765625 20 Carbamidomethyl (C) _MPLLFGC(Carbamidomethyl (C))EH_ nc|ENSG00000179889|Q6P996-4|PDXDC1;ENSG00000179889|ENST00000396410|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;nc|ENSG00000179889|Q6P996-3|PDXDC1 16.942295170755138 0.3780752226737986 3 MP{I|L} 3 -1 40.076 0.0 0.0 3.635 0.0 0.0 0.0 758.2960479481742 758.2960479481742 17.6529573343414 0.0 0.0 0.0 0 0.7302046884880937 0.958607314841775 0.0 0.0 MP{I|L} 3.635 + + 56 + 1 1.177 37222.5 1.0 7619 5459 13060 HBL1_DMSO_200M_050219_1,13080 HBL1_DMSO_200M_050219_1,13080,MPLLFGCEH False False RLLENMTEV 66.303414 552.756579577923 4015261.25 13060.0 nc|ENSG00000179889|Q6P996-4|PDXDC1;;ENSG00000179889|ENST00000396410|PDXDC1;;nc|ENSG00000179889|Q6P996-5|PDXDC1;;nc|ENSG00000179889|Q6P996-3|PDXDC1 3.496478239695231 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13082 66.308 8.3 7636600.0 25 0 699560.0 + 44605 YPFKPPKI 8 74 495.29454849115496 988.57454404911 2 495.2946960330009 MULTI CID FTMS 0 0 0 13081 6504215.0 0.6605170406036991 8 -0.5855636596679688 1 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 36.04419817259434 0.3004715606373109 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 64.047 0.0 0.0 6.4788 6.4788 92.438 0.0 0.0 0.0 39.152927686667766 7.677386778198169 7.677386778198169 23.010299956639805 0 0.3807196863200844 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L};{I|L}YMKPPK{I|L} 6.4788;4.1511;3.8924;3.5879 +;-;-;- + 154 + 1 1.177 54877.2 1.0 7620 5460 13081 HBL1_DMSO_200M_050219_1,13082 HBL1_DMSO_200M_050219_1,13082,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13083 66.309 8.8 6732000.0 25 0 476310.0 + 24854 MPLVKSVTV 9 86 487.2894483836528 972.5643438341056 2 487.2902709841728 MULTI CID FTMS 0 0 0 13081 6235690.5 1.0 0 0.0 2 Unmodified _MPLVKSVTV_ ENSG00000164307|ENST00000443439|ERAP1;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1 41.95555342248728 0.0647214845423414 3 MP{I|L}V 4 5 42.994 0.0 0.0 4.4207 0.0 0.0 0.0 529.2982271783811 529.2982271783811 11.941066651844777 0.0 0.0 0.0 0 1.055462187404089 1.154901959985743 0.0 0.0 + MP{I|L}V 4.4207 + + 174 + 1 1.177 52590.7 1.0 7621 5460 13081 HBL1_DMSO_200M_050219_1,13083 HBL1_DMSO_200M_050219_1,13083,MPLVKSVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13084 66.31 14.0 3973000.0 25 0 608620.0 + 6109 DSVIISRI 8 58 451.7688633815617 901.5231738299234 2 451.7689391970634 MULTI CID FTMS 0 0 0 13081 3806230.5 0.7284089858715204 -1 0.0826950073242187 3 Unmodified _DSVIISRI_ ENSG00000072415|ENST00000261681|PALS1;nc|ENSG00000072415|Q8N3R9-2|PALS1 49.93300154707207 0.1395624531867191 3 {[DS]|[MA]|[CV]|TT}V{I|L}{I|L}S[R{I|L}] 8 0 + 46.159 0.0 0.0 5.1201 5.1201 74.014 0.0 0.0 0.0 6.989700043360188 0.7918124604762511 0.7918124604762511 0.7918124604762511 0 0.9247425010840048 0.0 0.4247425010840047 0.4247425010840047 + + {[DS]|[MA]|[CV]|TT}V{I|L}{I|L}S[R{I|L}];{[DS]|[MA]|[CV]|TT}V{I|L}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 5.1201;5.0322 +;- + 54 + 1 1.177 52676.4 1.0 7622 5460 13081 HBL1_DMSO_200M_050219_1,13084 HBL1_DMSO_200M_050219_1,13084,DSVIISRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13085 66.311 12.0 3759500.0 25 0 205210.0 + 24762 MPHLSMQQV 9 80 535.76056334272 1069.50657375224 2 535.7599975466728 MULTI CID FTMS 0 0 0 13081 3833895.0 0.338699760147357 -4 0.3897323608398437 4 Unmodified _MPHLSMQQV_ ENSG00000142207|ENST00000382751|URB1 42.09456458481378 0.0639583784996157 3 [AG]V[HN]SMQQV 10 4 + 43.918 0.0 0.0 4.1064 4.1064 73.502 0.0 0.0 0.0 6.532125137753432 9.457640437841874 6.532125137753432 2.442190502882156 0 0.5440228147639203 1.6989700043360187 0.805462187404089 0.0 [AG]V[HN]SMQQV;[AG]V[HN]SQMQV;[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}SMQQV;[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}SQMQV;[AG]V[HN]SM[AG]QV;[AG]V[HN]S[AG]MQV;{[QV]|[N{I|L}]|[RA]|[KV]}[HN]SMQQV;[H{I|L}]S{NN|[MP]|[D{I|L}]|[EV]}MQQV;[H{I|L}][WE]MQQV;{[QV]|[N{I|L}]|[RA]|[KV]}[HN]SQMQV 4.1064;3.878;3.4956;3.2673;3.2495;3.0211;2.9787;2.9327;2.8899;2.7503 -;-;-;-;-;-;-;-;-;- 418 1 1.177 41721.4 1.0 7623 5460 13081 HBL1_DMSO_200M_050219_1,13085 HBL1_DMSO_200M_050219_1,13085,MPHLSMQQV True True MPHLSMQQV 66.311141 535.759997546673 187529280.0 13081.0 ENSG00000142207|ENST00000382751|URB1 8.501012961069742 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13086 66.312 15.0 2579000.0 25 0 222010.0 + 12847 GVVEGKALSEL 11 82 551.310870277196 1100.607187621192 2 551.3114501833916 MULTI CID FTMS 0 0 0 13081 2509384.5 1.0 0 0.0 5 Unmodified _GVVEGKALSEL_ ENSG00000078237|ENST00000179259|TIGAR 30.7034409873982 0.3712764582118616 3 [VG]VE 4 7 48.5 0.0 0.0 4.4067 0.0 0.0 0.0 713.3843730153656 713.3843730153656 31.04757507271316 0.0 0.0 0.0 0 0.805462187404089 2.0 0.4247425010840047 0.0 + [VG]VE 4.4067 + + 293 + 1 1.177 37571.7 1.0 7624 5460 13081 HBL1_DMSO_200M_050219_1,13086 HBL1_DMSO_200M_050219_1,13086,GVVEGKALSEL False True GVVEGKALSEL 66.31232 551.311450183392 75394264.0 13081.0 ENSG00000078237|ENST00000179259|TIGAR 6.363882064819336 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13087 66.313 29.0 1934500.0 25 0 247890.0 + 39121 TYGERVVAF 9 88 521.2717946458087 1040.5290363584172 2 521.2720825076103 MULTI CID FTMS 0 0 0 13081 1778989.75 0.0111581903947736 19 -1.454132080078125 6 Unmodified _TYGERVVAF_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;ENST00000462343.1_1_2:10266966-10267371:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 27.22323531849824 0.1848086127304535 3 TY{M(Oxidation (M))|F}[Q{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 8 6 + 50.411 0.0 0.0 4.8448 4.8448 78.354 0.0 0.0 0.0 15.718421963928437 2.7916813960059983 2.7916813960059983 4.050697163554986 0 0.3807196863200844 2.0 0.5 0.0 TY{M(Oxidation (M))|F}[Q{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};TYV[DV]QVA{M(Oxidation (M))|F};TY{M(Oxidation (M))|F}[Q{I|L}][RD]V;TY{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K][{I|L}P]{I|L};[HV]Y[{I|L}V][YT]{M(Oxidation (M))|F};[HV]V[WM]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[HV]V[WM][RD]V 4.8448;4.4555;4.2533;3.7856;1.6772;0.92398;0.33253 -;-;-;-;-;-;- 227 + 1 1.177 49569.5 1.0 7625 5460 13081 HBL1_DMSO_200M_050219_1,13087 HBL1_DMSO_200M_050219_1,13087,TYGERVVAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13088 66.315 24.0 1975100.0 25 0 151790.0 30032 QTPQRLLEV 9 87 542.3114583359417 1082.6083637386832 2 542.3117553591728 MULTI CID FTMS 0 0 0 13081 1629560.375 0.1888656249134374 4 -0.2883987426757812 7 Unmodified _QTPQRLLEV_ ENSG00000133119|ENST00000380071|RFC3;nc|ENSG00000133119|P40938-2|RFC3 29.081581746732265 0.1611639662936252 3 [QT][RH]A{I|L}{I|L} 7 5 24.838 0.0 0.0 2.2943 0.0 0.0 0.0 260.127808889327 260.127808889327 11.026066040927873 0.0 0.0 0.0 0 0.5 1.154901959985743 0.3054621874040891 0.2215141619232908 [QT][RH]A{I|L}{I|L} 2.2943 - 76 1 1.177 45254.5 1.0 7626 5460 13081 HBL1_DMSO_200M_050219_1,13088 HBL1_DMSO_200M_050219_1,13088,QTPQRLLEV False True HLPSDFTPAV 66.314677 542.311755359173 6528057.0 13081.0 P01966 2.3266846736272178 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13089 66.316 19.0 2559200.0 25 0 280460.0 + 21645 LPLGGCRVV 9 73 457.268699469777 0 457.2682678103447 PEAK CID FTMS 0 0 0 13081 1580949.25 0.9472720714437436 -1 0.0826950073242187 8 Unmodified _LPLGGCRVV_ ENSG00000198912|ENST00000361605|C1orf174;ENST00000486765.5_1_1:3806526-3811957:-|nuORF 26.88365393820708 0.1386685954232994 3 P{I|L}G 3 6 22.435 0.0 0.0 2.4586 0.0 0.0 113.08416840909791 529.2561739557249 642.3403423648228 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + P{I|L}G 2.4586 + + 33 + 1 1.177 40063.1 1.0 7627 5460 13081 HBL1_DMSO_200M_050219_1,13089 HBL1_DMSO_200M_050219_1,13089,LPLGGCRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13090 66.317 43.0 1278200.0 25 0 211420.0 + 1383 ALAGEFIRA 9 82 474.269310611614 946.524068290028 2 474.2697326540947 MULTI CID FTMS 0 0 0 13081 1195441.875 1.0 0 0.0 9 Unmodified _ALAGEFIRA_ ENSG00000089248|ENST00000261735|ERP29 20.580933911654288 0.2795815587326093 3 [{I|L}A]AGE{M(Oxidation (M))|F}{I|L} 7 2 57.083 0.0 0.0 6.0308 0.0 0.0 0.0 242.1263674371704 242.1263674371704 41.52329900893675 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + [{I|L}A]AGE{M(Oxidation (M))|F}{I|L} 6.0308 + + 111 + 1 1.177 49009.5 1.0 7628 5460 13081 HBL1_DMSO_200M_050219_1,13090 HBL1_DMSO_200M_050219_1,13090,ALAGEFIRA False True ALAGEFIRA 66.31706 474.269732654095 5686459.5 13081.0 ENSG00000089248|ENST00000261735|ERP29 5.9361998240153 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13091 66.319 62.0 1763700.0 25 0 114160.0 + 38113 TPLQIKSVV 9 129 492.8092503609277 983.6039477886554 2 492.8091003298759 MULTI CID FTMS 0 0 0 13081 957569.4375 1.0 0 0.0 10 Unmodified _TPLQIKSVV_ ENSG00000196235|ENST00000432763|SUPT5H;nc|ENSG00000196235|O00267-2|SUPT5H 59.05245873256422 0.0266066919017776 3 TP{I|L}Q{I|L}KSVV 9 0 + 73.845 0.0 0.0 7.5076 7.5076 91.724 0.0 0.0 0.0 49.64333124107816 8.64902171010165 8.64902171010165 9.208187539523736 0 2.385151878060192 1.6989700043360187 0.0 0.3494850021680094 + + TP{I|L}Q{I|L}KSVV;TP{I|L}[AG]{I|L}KSVV;[TP]{I|L}Q{I|L}KSVV;[TP]{I|L}[AG]{I|L}KSVV;[{I|L}P]TQ{I|L}KSVV;{[VA]|[{I|L}G]}APT{I|L}KSVV;[TP]{I|L}VAAKSVV;[{I|L}P]QT{I|L}KSVV;[{I|L}P]T[AG]{I|L}KSVV;[{I|L}P][AG]T{I|L}KSVV 7.5076;6.5714;5.2902;4.354;3.933;3.6512;3.4371;3.3396;2.9968;2.4035 +;-;+;-;-;-;-;-;-;- + 698 + 1 1.177 84437.0 1.0 7629 5460 13081 HBL1_DMSO_200M_050219_1,13091 HBL1_DMSO_200M_050219_1,13091,TPLQIKSVV True True TPLQIKSVV 66.318572 492.809100329876 8663158.0 13081.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H 5.239741961161296 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13092 66.321 95.0 914980.0 25 0 148760.0 + 45923 YYYDGDIGNY 10 103 621.7509952289752 1241.4874375247502 2 621.7513305544853 MULTI CID FTMS 0 0 0 13081 919593.375 0.8903864188466322 -1 0.0826950073242187 11 Unmodified _YYYDGDIGNY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 46.020951573049366 0.1035046897853725 3 YYDGDY 6 4 39.983 0.0 0.0 3.2206 0.0 0.0 0.0 462.1971335682072 462.1971335682072 13.981537603853589 0.0 0.0 0.0 0 0.0 2.0 0.9559771852360796 0.0 YYDGDY 3.2206 - 412 1 1.177 69285.4 1.0 7630 5460 13081 HBL1_DMSO_200M_050219_1,13092 HBL1_DMSO_200M_050219_1,13092,YYYDGDIGNY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13093 66.322 51.0 1239600.0 25 0 143840.0 + 8714 EVLHSLPAV 9 96 482.7770357272186 963.5395185212373 2 482.7774536013603 MULTI CID FTMS 0 0 0 13081 907705.8125 0.7277636194482898 -5 0.4813232421875 12 Unmodified _EVLHSLPAV_ ENSG00000163636|ENST00000295901|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;ENST00000497315.5_1_3:64004227-64005057:-|nuORF;nc|ENSG00000163636|Q15008-2|PSMD6;nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6 50.855029805455786 0.0384952370514206 3 {[TV]|[{I|L}S]}H{I|L}D{I|L}APV 9 6 + 48.682 0.0 0.0 5.0524 5.0524 80.144 0.0 0.0 0.0 2.034853276937852 23.45818501761766 2.034853276937852 4.882039389409336 0 1.0138793319624575 0.8239087409443188 1.41944517631652 0.0 {[TV]|[{I|L}S]}H{I|L}D{I|L}APV;{NN|[MP]|[D{I|L}]|[EV]}[H{I|L}]S{I|L}APV;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}VV{I|L}WV;[H{I|L}]S{I|L}D{I|L}APV;{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}WV;[HS]{I|L}{I|L}D{I|L}APV;[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}S{I|L}APV;[R{M(Oxidation (M))|F}]{I|L}S{[QN]|[E{I|L}]|[KN]}TV;{NN|[MP]|[D{I|L}]|[EV]}[YR]{I|L}VSV;[R{M(Oxidation (M))|F}]{I|L}S{[QN]|[E{I|L}]|[KN]}S{I|L} 5.0524;4.5457;4.2456;3.9082;3.6266;3.6215;3.5773;3.401;2.749;2.6518 -;-;-;-;-;-;-;-;-;- 652 1 1.177 56807.9 1.0 7631 5460 13081 HBL1_DMSO_200M_050219_1,13093 HBL1_DMSO_200M_050219_1,13093,EVLHSLPAV True True EVLHSLPAV 66.321995 482.77745360136 17427806.0 13081.0 ENST00000476464.5_1_3:63996346-64008248:-|nuORF;;nc|ENSG00000163636|Q15008-2|PSMD6;;nc|ENSG00000163636|Q15008-4|PSMD6;;ENSG00000163636|ENST00000295901|PSMD6;;nc|ENSG00000163636|Q15008-3|PSMD6;;ENST00000497315.5_1_3:64004227-64005057:-|nuORF 6.604493935902913 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13094 66.324 93.0 990350.0 25 0 61336.0 + 29345 QIVERVIAV 9 138 513.8189871976965 1025.623421462193 2 513.8194457888603 MULTI CID FTMS 0 0 0 13081 703052.6875 1.0 0 0.0 13 Unmodified _QIVERVIAV_ ENSG00000173575|ENST00000394196|CHD2;nc|ENSG00000173575|O14647-2|CHD2;nc|ENSG00000173575|O14647-3|CHD2 58.6788170122104 0.0268135626297836 3 [Q{I|L}]V[TA]MR 7 6 34.765 0.0 0.0 3.3896 0.0 0.0 0.0 223.14498315982652 223.14498315982652 13.65028079400878 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.3054621874040891 0.0 [Q{I|L}]V[TA]MR 3.3896 - 311 + 1 1.177 72480.7 1.0 7632 5460 13081 HBL1_DMSO_200M_050219_1,13094 HBL1_DMSO_200M_050219_1,13094,QIVERVIAV True True QIVERVIAV 66.324043 513.81944578886 2843355.5 13081.0 ENSG00000173575|ENST00000394196|CHD2;;nc|ENSG00000173575|O14647-2|CHD2;;nc|ENSG00000173575|O14647-3|CHD2 3.945808251698812 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13095 66.326 99.0 931060.0 25 0 132440.0 + 1649 ALNDHFVKL 9 106 352.8658088611583 1055.575597183675 3 352.8658019900322 MULTI CID FTMS 0 0 0 13081 588305.0 0.9571749018687468 -1 0.0826950073242187 14 Unmodified _ALNDHFVKL_ ENSG00000111640|ENST00000229239|GAPDH;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;ENST00000466525.1_1_12:6646524-6647333:+|nuORF;nc|ENSG00000111640|P04406-2|GAPDH 24.020572477871973 0.2255576514309169 3 [{I|L}A]N[HD]{M(Oxidation (M))|F}VK{I|L} 9 0 + 39.148 0.0 0.0 3.7087 3.7087 75.726 0.0 0.0 0.0 7.416219043769601 4.771212547196619 4.771212547196619 4.771212547196619 0 0.4247425010840047 1.6989700043360187 0.0 0.3252574989159953 + + [{I|L}A]N[HD]{M(Oxidation (M))|F}VK{I|L};[{I|L}A]N[HD]{M(Oxidation (M))|F}V{I|L}K;[{I|L}A]GG[HD]{M(Oxidation (M))|F}VK{I|L};[{I|L}A]GG[HD]{M(Oxidation (M))|F}V{I|L}K;[{I|L}A]{I|L}{[YC]|[HE]}{I|L}[{M(Oxidation (M))|F}T]{I|L};[{I|L}A]N[HK]{I|L}[{M(Oxidation (M))|F}T]{I|L};[{I|L}A]N[HK]{I|L}Y[TP];[{I|L}A]GG[HK]{I|L}Y[TP] 3.7087;3.2566;2.8363;2.3843;1.7818;1.6634;1.4532;0.58088 +;-;-;-;-;-;-;- + 260 + 1 1.177 78439.2 1.0 7633 5460 13081 HBL1_DMSO_200M_050219_1,13095 HBL1_DMSO_200M_050219_1,13095,ALNDHFVKL False True ALNDHFVKL 66.326174 352.865801990032 2928488.5 13081.0 nc|ENSG00000111640|P04406-2|GAPDH;;ENST00000466525.1_1_12:6646524-6647333:+|nuORF;;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;;ENSG00000111640|ENST00000229239|GAPDH 6.929761250813802 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13096 66.329 111.0 799070.0 25 0 67124.0 + 2821 AVAPLIKGV 9 113 434.24326329186215 866.4719736505243 2 434.2433349490166 MULTI CID FTMS 0 0 0 13081 590022.1875 0.2325923950862959 10 -0.7618942260742188 15 Unmodified _AVAAKHRD_ nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A 6.354104778181461 0.7857632046190106 3 {[VA]|[{I|L}G]}A 3 5 16.031 0.0 0.0 1.8501 0.0 0.0 0.0 622.3063296898399 622.3063296898399 3.123468415207501 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + {[VA]|[{I|L}G]}A 1.8501 + + 57 1 1.177 76465.2 1.0 7634 5460 13081 HBL1_DMSO_200M_050219_1,13096 HBL1_DMSO_200M_050219_1,13096,AVAAKHRD False False AVAPLIKGV 66.328508 434.243334949017 1764954.0 13081.0 nc|ENSG00000090889|O95239-2|KIF4A;;ENSG00000090889|ENST00000374403|KIF4A 4.380658785502116 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13097 66.33 72.0 878590.0 25 0 82600.0 + 33311 SFVDYQTTM 9 108 546.2394318236168 1090.4643107140334 2 546.2405883669853 MULTI CID FTMS 0 0 0 13081 539144.375 0.813077580328113 -1 0.0826950073242187 16 Unmodified _SFVDYQTTM_ ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF;nc|ENSG00000137076|Q9Y490-2|TLN1 26.88365393820708 0.1891292719743517 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VDY{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 9 2 + 39.159 0.0 0.0 3.5911 3.5911 81.247 0.0 0.0 0.0 10.28028723600244 3.925449767853316 3.925449767853316 10.28028723600244 0 0.0 2.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VDY{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[YD]|[{M(Oxidation (M))|F}M]}VAY{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[VG][YE]Y{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[PS][YT]Y{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[VS]{M(Oxidation (M))|F}DY{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[{M(Oxidation (M))|F}C]|[YS]}[TP]Y{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 3.5911;2.6483;1.2111;1.0077;0.90467;0.75108 -;-;-;-;-;- 359 1 1.177 54685.6 1.0 7635 5460 13081 HBL1_DMSO_200M_050219_1,13097 HBL1_DMSO_200M_050219_1,13097,SFVDYQTTM False True SFVDYQTTM 66.330206 546.240588366985 3020791.75 13081.0 ENST00000486788.2_1_9:35704327-35706084:-|nuORF;;nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 4.618430852890015 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13098 66.332 88.0 933940.0 25 0 97292.0 + 37008 TFPNGVKGL 9 107 466.7632680151626 931.5119830971252 2 466.7637817263603 MULTI CID FTMS 0 0 0 13081 582044.0 0.4196817671881437 10 -0.7618942260742188 17 Unmodified _TFPNGVKGL_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 14.838274106304384 0.4350285940865338 3 NPET 4 8 21.37 0.0 0.0 2.2941 0.0 0.0 472.30033117849234 0.0 472.30033117849234 0.0 5.958931237910999 0.0 0.0 0 0.5172203223519531 0.0 0.0 0.0 NPET 2.2941 - 188 1 1.177 66995.9 1.0 7636 5460 13081 HBL1_DMSO_200M_050219_1,13098 HBL1_DMSO_200M_050219_1,13098,TFPNGVKGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13099 66.334 106.0 1018700.0 25 0 212980.0 34200 SLPAPGLL 8 104 384.23556222770833 766.4565715222167 2 384.2357360720634 MULTI CID FTMS 0 0 0 13081 529803.75 0.027497760437968 -5 0.4813232421875 18 Unmodified _SLPAPGLL_ ENSG00000149582|ENST00000313236|TMEM25;ENST00000529001.5_1_11:118402516-118404307:+|nuORF;nc|ENSG00000149582|Q86YD3-4|TMEM25 2.302733041254933 0.8103549651115762 3 T 1 8 3.0989 0.0 0.0 0.40432 0.0 0.0 383.2490042388167 279.14548669986567 662.3944909386823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.40432 - 5 + 1 1.177 87814.4 1.0 7637 5460 13081 HBL1_DMSO_200M_050219_1,13099 HBL1_DMSO_200M_050219_1,13099,SLPAPGLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13100 66.336 59.0 1003400.0 25 0 62416.0 + 39045 TVVEDGSLPQV 11 102 572.298975248926 1142.583397564652 2 572.2995483279228 MULTI CID FTMS 0 0 0 13081 415359.21875 1.0 0 0.0 19 Unmodified _TVVEDGSLPQV_ ENSG00000158526|ENST00000375151|TSR2 21.53697664764585 0.586507868110548 3 [Y{M(Oxidation (M))|F}]R[{I|L}P]DTT 8 10 21.203 0.0 0.0 1.8557 0.0 0.0 0.0 146.06853880520126 146.06853880520126 1.3202941589736523 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 [Y{M(Oxidation (M))|F}]R[{I|L}P]DTT 1.8557 - 603 1 1.177 49669.3 1.0 7638 5460 13081 HBL1_DMSO_200M_050219_1,13100 HBL1_DMSO_200M_050219_1,13100,TVVEDGSLPQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13101 66.339 151.0 869950.0 25 0 70408.0 + 29688 QPFEDTPVV 9 171 516.2558955175426 1030.4972381018852 2 516.2557861208916 MULTI CID FTMS 0 0 0 13081 455774.65625 0.0532285601527854 -5 0.4813232421875 20 Unmodified _QPFEDTPVV_ ENSG00000123485|ENST00000411486|HJURP;ENST00000454020.1_3_2:234756047-234763110:-|nuORF;nc|ENSG00000123485|Q8NCD3-2|HJURP;nc|ENSG00000123485|Q8NCD3-3|HJURP 34.10243960390752 0.1078313939113124 3 [VP]MEC(Carbamidomethyl (C))T 6 6 33.097 0.0 0.0 3.2117 0.0 0.0 0.0 310.1761706278804 310.1761706278804 9.796094286916954 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.9247425010840048 0.0 [VP]MEC(Carbamidomethyl (C))T 3.2117 - 1069 1 1.177 117096.4 1.0 7639 5460 13081 HBL1_DMSO_200M_050219_1,13101 HBL1_DMSO_200M_050219_1,13101,QPFEDTPVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13103 66.343 8.9 5245700.0 25 0 341530.0 + 31163 RLPEAIEEV 9 58 528.290055908094 1054.565558882988 2 528.2906371951103 MULTI CID FTMS 0 0 0 13102 5822473.0 0.17152441175618 9 -0.7264556884765625 1 Unmodified _RLPEAIEEV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 23.78978130925829 0.2284941198415988 3 A{I|L}EEV 5 4 44.821 0.0 0.0 4.2502 0.0 0.0 495.28132826972814 0.0 495.28132826972814 0.0 22.597046968434142 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.0 + A{I|L}EEV 4.2502 + + 69 1 1.179 43866.1 1.0 7640 5461 13102 HBL1_DMSO_200M_050219_1,13103 HBL1_DMSO_200M_050219_1,13103,RLPEAIEEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13104 66.345 75.0 689500.0 25 0 71579.0 + 37810 TLSSVWPSTV 10 93 538.7850504685234 1075.5555480038468 2 538.7848388552666 MULTI CID FTMS 0 0 0 13102 593364.625 1.0 0 0.0 2 Unmodified _TLSSVWPSTV_ REV__ENST00000562945.2_1_16:34428948-34429212:-|nuORF 20.453626601364224 0.5043500229302764 3 [{I|L}T]SW 4 -1 26.572 0.0 0.0 2.4705 0.0 0.0 0.0 585.288494131053 585.288494131053 -0.9217864655557976 0.0 -0.9217864655557976 0.0 0 0.0 2.0 0.2302046884880938 0.0 [{I|L}T]SW 2.4705 - 248 1 1.179 46913.5 1.0 7641 5461 13102 HBL1_DMSO_200M_050219_1,13104 HBL1_DMSO_200M_050219_1,13104,TLSSVWPSTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13105 66.346 54.0 1689600.0 25 0 327420.0 + + 37484 FTIDVDKKL 9 98 360.2099521554608 1077.6080270665825 3 360.2101013064384 MULTI CID FTMS 0 0 0 13102 1032847.25 1.0 0 0.0 3 Unmodified _TLFLSQEKI_ nc|ENSG00000112984|O95235-2|KIF20A;ENSG00000112984|ENST00000394894|KIF20A 32.30548876998284 0.1201446275138228 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TDVDKK{I|L} 9 -1 + 35.06 0.0 0.0 3.2535 3.2535 76.781 0.0 0.0 0.0 -1.327862308715588 8.416375079047505 -1.327862308715588 6.760912590556817 0 0.0 0.0 0.4247425010840047 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TDVDKK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}DQTK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TD{I|L}QTK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TDVAATK{I|L};KK[{M(Oxidation (M))|F}V]VDT{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}D[AG]TK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TD{I|L}[AG]TK{I|L};[VS][KT]{[MG]|[TS]}{I|L}T{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}[KS]{[MG]|[TS]}{I|L}T{[QN]|[E{I|L}]|[KN]} 3.2535;2.6261;2.3255;2.0297;1.8188;1.7716;1.471;0.4024;0.31724 -;-;-;-;-;-;-;-;- 271 + 1 1.179 79252.2 1.0 7642 5461 13102 HBL1_DMSO_200M_050219_1,13105 HBL1_DMSO_200M_050219_1,13105,TLFLSQEKI False False FTIDVDKKL 66.34617 360.210101306438 6438363.5 13102.0 nc|ENSG00000112984|O95235-2|KIF20A;;ENSG00000112984|ENST00000394894|KIF20A 3.822290023167928 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13106 66.348 86.0 1328800.0 25 0 186770.0 41026 VMEYHPRIIML 11 121 467.91715868997824 1400.7296466701348 3 467.9172851443291 MULTI CID FTMS 0 0 0 13102 775309.6875 0.5263992404546985 -3 0.2551727294921875 4 Unmodified _VMEYHPRIIML_ ENSG00000134480|ENST00000256897|CCNH 16.274544907608252 0.6966175468278786 3 [YV]{I|L}D{I|L}EK 7 8 66.771 0.0 0.0 4.7668 0.0 0.0 0.0 537.24404060205 537.24404060205 47.72956042477382 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.7742275032520141 0.3494850021680094 [YV]{I|L}D{I|L}EK 4.7668 - 1364 + 1 1.179 95421.7 1.0 7643 5461 13102 HBL1_DMSO_200M_050219_1,13106 HBL1_DMSO_200M_050219_1,13106,VMEYHPRIIML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13107 66.351 128.0 1116700.0 25 0 69091.0 + 24198 MAFLPHHI 8 126 322.50563433925555 964.4950736179668 3 322.5055724978447 MULTI CID FTMS 0 0 0 13102 716487.5625 0.6695609638714659 -3 0.2551727294921875 5 Unmodified _MAFLPHHI_ ENSG00000178974|ENST00000313833|FBXO34 24.20995872069341 0.5349487244130675 3 [WY]{I|L}PHH{I|L} 7 3 + 33.945 0.0 0.0 3.5194 3.5194 73.62 0.0 0.0 0.0 6.777807052660805 3.357921019231931 3.357921019231931 3.357921019231931 0 0.0 0.0 0.0 0.0 [WY]{I|L}PHH{I|L};[WY]{I|L}PH{I|L}H;[WY]{I|L}{I|L}EE{I|L};[WY]{I|L}[KQ]D{I|L} 3.5194;3.1713;1.9404;0.936 -;-;-;- 104 + 1 1.179 122430.4 1.0 7644 5461 13102 HBL1_DMSO_200M_050219_1,13107 HBL1_DMSO_200M_050219_1,13107,MAFLPHHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13108 66.352 34.0 1051900.0 25 0 68300.0 + + 10481 YFRPIDTTM 9 76 571.279252526639 1140.5439521200778 2 572.2775146365166 MULTI CID FTMS 0 0 0 13102 574541.125 0.592703906465742 -7 0.5947799682617188 6 Unmodified _FTPPGSPDPVQ_ nc|ENSG00000088992|Q96BS2-3|TESC;ENSG00000088992|ENST00000335209|TESC;nc|ENSG00000088992|Q96BS2-2|TESC 17.11289562659939 0.6791789249425932 3 T{M(Oxidation (M))|F} 2 -1 20.969 0.0 0.0 1.8385 0.0 0.0 874.4337635724625 0.0 874.4337635724625 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 T{M(Oxidation (M))|F} 1.8385 - 73 1 1.179 34148.9 1.0 7645 5461 13102 HBL1_DMSO_200M_050219_1,13108 HBL1_DMSO_200M_050219_1,13108,FTPPGSPDPVQ False False YFRPIDTTM 66.351885 572.277514636517 14423736.0 13102.0 nc|ENSG00000088992|Q96BS2-3|TESC;;ENSG00000088992|ENST00000335209|TESC;;nc|ENSG00000088992|Q96BS2-2|TESC 6.937603950500488 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13109 66.354 92.0 697740.0 25 0 53223.0 + 9764 FMTTNVPNV 9 115 511.752203333274 1021.489853733348 2 511.7529785037041 MULTI CID FTMS 0 0 0 13102 509357.0625 1.0 0 0.0 7 Unmodified _FMTTNVPNV_ ENSG00000087274|ENST00000683351|ADD1;ENST00000503169.5_1_4:2877642-2906862:+|nuORF;ENST00000508684.5_1_4:2877642-2900342:+|nuORF;ENST00000509039.5_1_4:2877642-2901297:+|nuORF;nc|ENSG00000087274|P35611-2|ADD1;nc|ENSG00000087274|P35611-3|ADD1;nc|ENSG00000087274|P35611-4|ADD1;nc|ENSG00000087274|P35611-5|ADD1;nc|ENSG00000087274|P35611-6|ADD1;nc|ENSG00000087274|P35611|ADD1 34.10243960390752 0.1078313939113124 3 [{I|L}T]N{[HG]|PP}NE[HT] 9 7 + 43.835 0.0 0.0 4.2913 4.2913 78.47 0.0 0.0 0.0 5.791069339139682 0.7378621416091846 0.7378621416091846 5.791069339139682 0 0.3494850021680094 1.6989700043360187 0.1989700043360188 0.4247425010840047 [{I|L}T]N{[HG]|PP}NE[HT];QQEN{[HG]|PP}PNV;[{I|L}T]N{[HG]|PP}GGE[HT];QQEN{[HG]|PP}NPV;[{I|L}T]GG{[HG]|PP}NE[HT];QQEGG{[HG]|PP}PNV;QQEGG{[HG]|PP}NPV;QQEN{[HG]|PP}PGGV;{[QS]|[NT]}{I|L}{[HG]|PP}NE[HT];{[TV]|[{I|L}S]}Q{[HG]|PP}NE[HT] 4.2913;3.7243;3.3898;3.2899;2.974;2.8229;2.3884;2.3282;2.166;2.0229 -;-;-;-;-;-;-;-;-;- 735 1 1.179 56699.0 1.0 7646 5461 13102 HBL1_DMSO_200M_050219_1,13109 HBL1_DMSO_200M_050219_1,13109,FMTTNVPNV True True FMTTNVPNV 66.353912 511.752978503704 2305476.25 13102.0 nc|ENSG00000087274|P35611-3|ADD1;;ENST00000508684.5_1_4:2877642-2900342:+|nuORF;;nc|ENSG00000087274|P35611|ADD1;;nc|ENSG00000087274|P35611-6|ADD1;;ENSG00000087274|ENST00000683351|ADD1;;ENST00000503169.5_1_4:2877642-2906862:+|nuORF;;nc|ENSG00000087274|P35611-4|ADD1;;nc|ENSG00000087274|P35611-5|ADD1;;ENST00000509039.5_1_4:2877642-2901297:+|nuORF;;nc|ENSG00000087274|P35611-2|ADD1 4.770144701004028 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13110 66.36 330.0 409800.0 25 0 43816.0 -1 0 133 635.340167507035 634.3328910404349 1 635.3398315310478 MULTI CID FTMS 0 0 0 13102 475601.4375 0.8887509044160028 1 -0.1204071044921875 8 3 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}{I|L} 5 -1 + 44.353 0.0 0.0 6.9921 6.9921 86.83 0.0 0.0 0.0 5.378559472270581 16.020599913279625 5.378559472270581 5.378559472270581 0 0.2302046884880938 0.0 0.6549471895720984 0.805462187404089 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}{I|L};[AG]D{I|L}{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}E{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E{I|L};[AG]D{M(Oxidation (M))|F}{I|L}{I|L};{[DA]|[EG]}G{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VE{I|L} 6.9921;6.1442;5.9978;5.644;5.4183;5.2566;5.1881;4.9433;4.7802;4.4005 -;-;-;-;-;-;-;-;-;- 234 1 1.179 109831.1 1.0 7647 5461 13102 HBL1_DMSO_200M_050219_1,13110 HBL1_DMSO_200M_050219_1,13110, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13111 66.367 390.0 569590.0 25 0 60893.0 + 39535 VAVLVSTV 8 102 787.4918141500633 786.4845376834633 1 787.4922363162041 MULTI CID FTMS 0 0 0 13102 383569.09375 0.3167215961296739 -3 0.2551727294921875 9 Unmodified _VAVLVSTV_ ENSG00000154760|ENST00000285013|SLFN13;nc|ENSG00000154760|Q68D06-2|SLFN13 74.39630413441286 0.1057069479668299 3 {[VA]|[{I|L}G]}V{I|L}VSTV 8 0 + 66.839 0.0 0.0 8.4984 8.4984 86.832 0.0 0.0 0.0 7.099560728134513 17.245462655597095 7.099560728134513 3.0102999566398125 0 1.1278623208748888 0.958607314841775 0.8807196863200843 0.0 + + {[VA]|[{I|L}G]}V{I|L}VSTV;{[VA]|[{I|L}G]}VV{I|L}STV;{[VA]|[{I|L}G]}V{I|L}SVTV;[{I|L}V]G{I|L}VSTV;{[VA]|[{I|L}G]}{I|L}VVSTV;{[VA]|[{I|L}G]}VVTVTV;[{I|L}V]GV{I|L}STV;{[VA]|[{I|L}G]}V{I|L}STVV;VVA{I|L}VSTV;{[VA]|[{I|L}G]}VVVTTV 8.4984;8.1157;7.6884;7.5957;7.5247;7.3056;7.213;7.167;6.9535;6.9222 +;-;-;-;-;-;-;-;-;- + 1524 1 1.179 153464.0 1.0 7648 5461 13102 HBL1_DMSO_200M_050219_1,13111 HBL1_DMSO_200M_050219_1,13111,VAVLVSTV True True IGVIVSTV 66.366926 787.492236316204 10278884.0 13102.0 ENSG00000145740|ENST00000396591|SLC30A5;;nc|ENSG00000145740|Q8TAD4-2|SLC30A5;;ENST00000507354.5_1_5:68398890-68419336:+|nuORF 3.638092358907064 1.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13112 66.374 382.0 315340.0 25 0 39922.0 + 43994 YIDKDLEYV 9 144 579.2902595366455 1156.565966140091 2 579.2899658083916 MULTI CID FTMS 0 0 0 13102 333228.625 0.4763919767299936 -3 0.2551727294921875 10 Unmodified _YIDKDLEYV_ ENSG00000113360|ENST00000344624|DROSHA;ENST00000509067.1_1_5:31409161-31409425:-|nuORF;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA 36.506200033944 0.094635877243972 3 {NN|[MP]|[D{I|L}]|[EV]}WWY{I|L}YV 8 5 + 47.33 0.0 0.0 4.0922 4.0922 75.33 0.0 0.0 0.0 14.09765299137284 28.967137774837603 14.09765299137284 3.51674073502884 0 0.5484550065040281 1.0457574905606752 0.7742275032520141 0.0 {NN|[MP]|[D{I|L}]|[EV]}WWY{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}YKDE{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}EKDY{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}YKD{I|L}EYV;{[QN]|[E{I|L}]|[KN]}DKDY{I|L}YV;[PA]Y[R{M(Oxidation (M))|F}]E{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}YWW{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}W{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}{I|L}YV;{[QD]|[EN]|[WG]|[KD]|[RS]}D[Y{I|L}]E{I|L}YV;{[TV]|[{I|L}S]}M[R{M(Oxidation (M))|F}]E{I|L}YV 4.0922;3.7882;3.4917;3.0084;2.8523;2.7214;2.5559;2.5106;2.3938;2.3435 -;-;-;-;-;-;-;-;-;- 1162 1 1.179 95341.3 1.0 7649 5461 13102 HBL1_DMSO_200M_050219_1,13112 HBL1_DMSO_200M_050219_1,13112,YIDKDLEYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13113 66.381 386.0 308940.0 25 0 35802.0 + -1 VVSGLPACLMT 11 158 574.2956740510742 1146.5767951689484 2 574.2964355349541 MULTI CID FTMS 0 0 0 13102 344716.375 1.0 0 0.0 11 Carbamidomethyl (C) _VVSGLPAC(Carbamidomethyl (C))LMT_ REV__ENSG00000152779|ENST00000371790|SLC16A12 22.736283301280096 0.5583477779825423 3 VVVTG 5 -1 57.167 0.0 0.0 4.9859 0.0 0.0 0.0 688.2801607721311 688.2801607721311 42.47425010840047 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 VVVTG 4.9859 - 1056 + 1 1.179 100424.5 1.0 7650 5461 13102 HBL1_DMSO_200M_050219_1,13113 HBL1_DMSO_200M_050219_1,13113,VVSGLPACLMT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13114 66.388 382.0 433810.0 25 0 50432.0 + 30325 RAEPEDHYFL 10 97 638.8015343436851 1275.5885157541702 2 638.8015014529228 MULTI CID FTMS 0 0 0 13102 331866.15625 1.0 0 0.0 12 Unmodified _RAEPEDHYFL_ ENSG00000115091|ENST00000263238|ACTR3;ENSG00000133627|ENST00000256001|ACTR3B;ENST00000489779.1_1_2:114684960-114691984:+|nuORF;ENST00000541653.2_1_14:22054224-22054383:-|nuORF;nc|ENSG00000133627|Q9P1U1-2|ACTR3B;nc|ENSG00000133627|Q9P1U1-3|ACTR3B 32.037481411007896 0.2488723560272515 3 DHY{M(Oxidation (M))|F}{I|L} 5 5 50.063 0.0 0.0 3.9247 0.0 0.0 582.2772083966812 0.0 582.2772083966812 0.0 39.09379381312206 0.0 0.0 0 0.5994850021680094 0.0 0.7614393726401688 0.0 + DHY{M(Oxidation (M))|F}{I|L} 3.9247 + + 60 1 1.179 124614.7 1.0 7651 5461 13102 HBL1_DMSO_200M_050219_1,13114 HBL1_DMSO_200M_050219_1,13114,RAEPEDHYFL False True RAEPEDHYFL 66.387616 638.801501452923 2698492.75 13102.0 nc|ENSG00000133627|Q9P1U1-3|ACTR3B;;ENST00000489779.1_1_2:114684960-114691984:+|nuORF;;ENSG00000115091|ENST00000263238|ACTR3;;ENST00000541653.2_1_14:22054224-22054383:-|nuORF;;nc|ENSG00000133627|Q9P1U1-2|ACTR3B;;ENSG00000133627|ENST00000256001|ACTR3B 6.387501080830892 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13115 66.395 417.0 541690.0 25 0 78207.0 + + -1 YVIDLEKGSQHL 12 139 701.3724981042158 1400.7304432752314 2 701.3734619021416 MULTI CID FTMS 0 0 0 13102 293739.9375 0.5033607442282895 -3 0.2551727294921875 13 Carbamidomethyl (C),Oxidation (M) _LSKIRC(Carbamidomethyl (C))LM(Oxidation (M))DLH_ ENST00000523277.6_1_8:41399408-41399603:+|nuORF;ENSG00000147536|ENST00000276533|GINS4 21.53697664764585 0.586507868110548 3 [YV]{I|L}D{I|L}EKGSQH{I|L} 12 -1 + 101.73 0.0 0.0 7.2628 7.2628 81.45 0.0 0.0 0.0 10.793285924952045 1.2371250542002483 1.2371250542002483 1.2371250542002483 0 3.1813681739009887 2.0 1.2302046884880935 0.3494850021680094 [YV]{I|L}D{I|L}EKGSQH{I|L};[YV]{I|L}D{I|L}EKGSQ{I|L}H;{NN|[MP]|[D{I|L}]|[EV]}{I|L}EVVE{I|L}D{I|L}M{I|L};{[TV]|[{I|L}S]}[WP]GKE{I|L}D{I|L}M{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{I|L}VVE{I|L}D{I|L}M{I|L};{I|L}VYD{I|L}EKGSQH{I|L};{I|L}VYD{I|L}EKGSQ{I|L}H;[YV]{I|L}D{I|L}EVV{[DS]|[MA]|[CV]|TT}H{I|L};[YV][HA]VVE{I|L}D{I|L}M{I|L};[YV]{I|L}D{I|L}EVV{[DS]|[MA]|[CV]|TT}{I|L}H 7.2628;7.1745;6.4923;6.4012;6.2774;6.1738;6.0855;5.8572;5.8239;5.7689 -;-;-;-;-;-;-;-;-;- 4384 + 1 1.179 161212.1 1.0 7652 5461 13102 HBL1_DMSO_200M_050219_1,13115 HBL1_DMSO_200M_050219_1,13115,LSKIRCLMDLH False False YVIDLEKGSQHL 66.395055 701.373461902142 30644622.5 13102.0 ENST00000523277.6_1_8:41399408-41399603:+|nuORF;;ENSG00000147536|ENST00000276533|GINS4 7.808247884114583 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13116 66.402 405.0 631120.0 25 0 48948.0 + 16736 KFIDKQLEL 9 224 567.331783035596 1132.649013137992 2 567.3304931521416 MULTI CID FTMS 0 0 0 13102 281471.3125 0.1077600452217188 -3 0.2551727294921875 14 Unmodified _KFIDKQLEL_ ENSG00000116688|ENST00000235329|MFN2;nc|ENSG00000116688|O95140-2|MFN2 100.7086487251713 0.0106210784076588 3 {[QN]|[E{I|L}]|[KN]}E{I|L}{M(Oxidation (M))|F}{I|L}KE{I|L} 9 6 + 81.277 0.0 0.0 7.1758 7.1758 81.814 0.0 0.0 0.0 4.418793819226224 14.500860253508108 4.418793819226224 1.5665704570467511 0 1.0501648626366045 1.3979400086720375 1.285666875892183 0.7898166913470483 {[QN]|[E{I|L}]|[KN]}E{I|L}{M(Oxidation (M))|F}{I|L}KE{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}{M(Oxidation (M))|F}{I|L}{I|L}EK;{[QN]|[E{I|L}]|[KN]}E{I|L}{M(Oxidation (M))|F}K{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}{M(Oxidation (M))|F}{I|L}KNK;{[QN]|[E{I|L}]|[KN]}E{I|L}{I|L}{M(Oxidation (M))|F}KE{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}DQK{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EK;{[QN]|[E{I|L}]|[KN]}E{I|L}{M(Oxidation (M))|F}{I|L}E{I|L}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}DQ{I|L}KE{I|L};[{I|L}T]AA{M(Oxidation (M))|F}Q{I|L}KE{I|L} 7.1758;7.0375;6.5339;6.4997;6.3751;6.2935;6.2368;6.1935;6.0526;5.9581 -;-;-;-;-;-;-;-;-;- 13478 1 1.179 192186.2 1.0 7653 5461 13102 HBL1_DMSO_200M_050219_1,13116 HBL1_DMSO_200M_050219_1,13116,KFIDKQLEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13117 66.411 411.0 234450.0 25 0 17586.0 + -1 DMYEQFQNI 9 146 602.2529504961846 1202.491348059169 2 602.2537719607353 MULTI CID FTMS 0 0 0 13102 259668.390625 0.8013251576079561 1 -0.1204071044921875 15 Oxidation (M) _DM(Oxidation (M))YEQFQNI_ ENST00000553923.1_1_14:35483969-35488318:+|nuORF;nc|ENSG00000100883|P61011-2|SRP54;ENST00000556445.1_1_14:35487839-35488318:+|nuORF;ENSG00000100883|ENST00000216774|SRP54 22.736283301280096 0.2418982879461534 3 {[{M(Oxidation (M))|F}D]|MM}YEQ{M(Oxidation (M))|F} 6 -1 17.88 0.0 0.0 1.4869 0.0 0.0 0.0 370.169057369969 370.169057369969 -0.3181744089420952 0.0 -0.3181744089420952 0.0 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}D]|MM}YEQ{M(Oxidation (M))|F} 1.4869 + + 408 1 1.179 70266.6 1.0 7654 5461 13102 HBL1_DMSO_200M_050219_1,13117 HBL1_DMSO_200M_050219_1,13117,DMYEQFQNI False False DMYEQFQNI 66.410818 602.253771960735 1412705.625 13102.0 ENST00000553923.1_1_14:35483969-35488318:+|nuORF;;nc|ENSG00000100883|P61011-2|SRP54;;ENST00000556445.1_1_14:35487839-35488318:+|nuORF;;ENSG00000100883|ENST00000216774|SRP54 4.961316744486491 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13118 66.42 544.0 268020.0 25 0 21978.0 + 28339 PSAPPVLAV 9 154 425.7552694274121 0 425.7557250857353 PEAK CID FTMS 0 0 0 13102 251114.609375 0.7007611019985337 9 -0.7264556884765625 16 Unmodified _PSAPPVLAV_ REV__ENSG00000161618|ENST00000293350|ALDH16A1;REV__ENST00000599652.5_1_19:49956588-49965222:+|nuORF;REV__nc|ENSG00000161618|Q8IZ83-2|ALDH16A1;REV__nc|ENSG00000161618|Q8IZ83-3|ALDH16A1 20.453626601364224 0.1969592619112565 3 V{I|L} 2 -1 10.217 0.0 0.0 1.2027 0.0 0.0 188.11762327404512 446.2060030572876 634.3236263313327 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{I|L} 1.2027 + + 69 + 1 1.179 116918.1 1.0 7655 5461 13102 HBL1_DMSO_200M_050219_1,13118 HBL1_DMSO_200M_050219_1,13118,PSAPPVLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13119 66.431 608.0 204640.0 25 0 23960.0 + 21557 LPKDFYDKI 9 173 380.20915759711227 1137.605643391537 3 380.2078735232353 MULTI CID FTMS 0 0 0 13102 235363.484375 1.0 0 0.0 17 Unmodified _LPKDFYDKI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 17.04857598603903 0.3751983262162568 3 {I|L}PKD{M(Oxidation (M))|F}YDK{I|L} 9 0 + 54.004 0.0 0.0 4.7471 4.7471 78.667 0.0 0.0 0.0 25.016894462103995 4.607308385314937 4.607308385314937 4.607308385314937 0 0.2134679910804404 0.8538719643217619 0.0 0.0 + + {I|L}PKD{M(Oxidation (M))|F}YDK{I|L};{I|L}PKD{M(Oxidation (M))|F}YD{I|L}K;{I|L}PKD{M(Oxidation (M))|F}YKD{I|L};{I|L}PKD{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}R{I|L};{I|L}PK{I|L}[TA][MD]H{I|L};{I|L}P{I|L}[YN]YDK{I|L};{I|L}PKD{M(Oxidation (M))|F}Y[VG]S{I|L};{I|L}PK{I|L}[TA]{[CA]|SS}PQP;{I|L}PKD{M(Oxidation (M))|F}YKEV;{I|L}PK{[RE]|[WV]}[MD]H{I|L} 4.7471;4.3421;3.8877;3.8418;3.3889;3.3209;3.2273;3.2133;3.1898;3.1219 +;-;-;-;-;-;-;-;-;- + 1215 + 1 1.179 103048.4 1.0 7656 5461 13102 HBL1_DMSO_200M_050219_1,13119 HBL1_DMSO_200M_050219_1,13119,LPKDFYDKI False True LPKDFYDKI 66.430997 380.207873523235 1890358.5 13102.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 3.5517494678497314 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13120 66.44 513.0 257640.0 25 0 22920.0 + 12932 HAAVLVETI 9 169 476.7771168914479 951.539680849696 2 476.7768432497978 MULTI CID FTMS 0 0 0 13102 195147.171875 0.6119265775456301 -7 0.5947799682617188 18 Unmodified _HAAVLVETI_ ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-2|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2;nc|ENSG00000163539|O75122|CLASP2 32.116972079565 0.1225432171549407 3 AEV{I|L}RG{M(Oxidation (M))|F} 7 6 35.878 0.0 0.0 3.7705 0.0 0.0 161.10457450379585 0.0 161.10457450379585 0.0 18.29791807517326 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 AEV{I|L}RG{M(Oxidation (M))|F} 3.7705 - 951 + 1 1.179 101761.3 1.0 7657 5461 13102 HBL1_DMSO_200M_050219_1,13120 HBL1_DMSO_200M_050219_1,13120,HAAVLVETI True True HAAVLVETI 66.440026 476.776843249798 4805202.5 13102.0 nc|ENSG00000163539|O75122-2|CLASP2;;ENSG00000163539|ENST00000682230|CLASP2;;nc|ENSG00000163539|O75122|CLASP2;;nc|ENSG00000163539|O75122-3|CLASP2 4.618833700815837 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13121 66.449 465.0 278040.0 25 0 45981.0 + -1 KMYEEFLSKV 10 119 645.3789583312081 0 645.3269531130791 PEAK CID FTMS 0 0 0 13102 95548.515625 0.1110074313252473 -4 0.3318939208984375 19 Oxidation (M) _LEAKQM(Oxidation (M))LLKSL_ ENSG00000188191|ENST00000537384|PRKAR1B;ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A 12.240655878213236 0.4295705806160874 3 S{I|L}{M(Oxidation (M))|F}E 4 -1 14.702 0.0 0.0 1.1408 0.0 0.0 245.28198895294787 564.2167452447874 809.4987341977353 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S{I|L}{M(Oxidation (M))|F}E 1.1408 - 82 + 1 1.179 100556.9 1.0 7658 5461 13102 HBL1_DMSO_200M_050219_1,13121 HBL1_DMSO_200M_050219_1,13121,LEAKQMLLKSL False False KMYEEFLSKV 66.449447 645.326953113079 2148310.0 13102.0 ENSG00000188191|ENST00000537384|PRKAR1B;;ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 4.457771142323812 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13122 66.459 559.0 109850.0 25 0 27366.0 + -1 LEMFEYEYYKL 11 85 772.3548461794853 0 772.3548461794853 PEAK CID FTMS 0 0 0 -1 0 20 Oxidation (M) _LEM(Oxidation (M))FEYEYYKL_ REV__ENSG00000054793|ENST00000338821|ATP9A;REV__nc|ENSG00000054793|O75110-2|ATP9A 1.3295316138638542 0.4761840153648598 3 A[DP]SGSD 7 -1 22.351 0.0 0.0 1.4488 0.0 0.0 97.98024757840548 812.4638155572874 910.4440631356928 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A[DP]SGSD 1.4488 - 42 + 1 1.179 51296.0 1.0 7659 5461 13102 HBL1_DMSO_200M_050219_1,13122 HBL1_DMSO_200M_050219_1,13122,LEMFEYEYYKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13124 66.463 16.0 1632800.0 25 0 257360.0 + 44809 YPNKYESII 9 47 563.7927518217267 1125.570950710253 2 563.7928344607353 MULTI CID FTMS 0 0 0 13123 2577748.5 0.6571262325505511 1 -0.1020355224609375 1 Unmodified _YPNKYESII_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 30.63653989081413 0.1413794767160703 3 YP 2 7 39.196 0.0 0.0 3.4823 0.0 0.0 0.0 862.4371431940061 862.4371431940061 12.606675369900127 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YP 3.4823 + + 51 + 1 1.179 25608.3 1.0 7660 5462 13123 HBL1_DMSO_200M_050219_1,13124 HBL1_DMSO_200M_050219_1,13124,YPNKYESII False True YPNKYESII 66.463455 563.792834460735 126212196.0 13123.0 nc|ENSG00000006125|P63010|AP2B1;;ENSG00000006125|ENST00000610402|AP2B1;;nc|ENSG00000006125|P63010-3|AP2B1 5.097131093343099 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13125 66.465 41.0 1140800.0 25 0 107850.0 -1 0 67 917.431509586288 1832.848466239376 2 917.433154284954 MULTI CID FTMS 0 0 0 13123 1233647.25 0.323863735929377 2 -0.1325531005859375 2 3 [MN]PN{I|L}NEA[H{I|L}]R{I|L}M 13 -1 68.295 0.0 0.0 3.7262 0.0 0.0 0.0 296.08930383853755 296.08930383853755 54.69460743509575 0.0 0.0 0.0 0 0.6237125054200234 1.6989700043360187 0.0 0.0 [MN]PN{I|L}NEA[H{I|L}]R{I|L}M 3.7262 - 697 + 1 1.179 37412.7 1.0 7661 5462 13123 HBL1_DMSO_200M_050219_1,13125 HBL1_DMSO_200M_050219_1,13125, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13126 66.466 11.0 3867900.0 25 0 661990.0 + 33530 SILEHQIQV 9 63 533.7983092010688 1065.5820654689376 2 533.7984496951103 MULTI CID FTMS 0 0 0 13123 4421956.5 0.6725604500450127 -2 0.1558456420898437 3 Unmodified _SILEHQIQV_ ENSG00000104738|ENST00000649973|MCM4 56.17704186161178 0.0281986971544335 3 [HQ]E{I|L}{I|L}S{I|L}QV 9 6 + 45.111 0.0 0.0 4.2335 4.2335 85.44 0.0 0.0 0.0 4.137342758552691 31.616225017174383 4.137342758552691 29.758950235313858 0 0.5440228147639203 0.0 0.3807196863200844 0.0 [HQ]E{I|L}{I|L}S{I|L}QV;[HQ]E{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}[KA] 4.2335;1.4407 -;- 104 1 1.179 40707.5 1.0 7662 5462 13123 HBL1_DMSO_200M_050219_1,13126 HBL1_DMSO_200M_050219_1,13126,SILEHQIQV True True SILEHQIQV 66.46583 533.79844969511 51662888.0 13123.0 ENSG00000104738|ENST00000649973|MCM4 5.640804449717204 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13127 66.467 34.0 1342400.0 25 0 125590.0 + 34690 SPSVHPIASL 10 94 504.27971494636216 1006.5448769595243 2 504.2809326052666 MULTI CID FTMS 0 0 0 13123 809057.1875 0.0155469249798788 -12 0.97210693359375 4 Unmodified _SPSVHPIASL_ REV__ENST00000481918.1_1_1:213186664-213188729:-|nuORF 30.63653989081413 0.2803493085145199 3 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 -1 + 53.641 0.0 0.0 5.3292 5.3292 87.229 0.0 0.0 0.0 3.335449600746898 38.57894990110104 3.335449600746898 12.67606240177031 0 0.9247425010840048 1.0457574905606752 0.7614393726401688 0.0 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 5.3292;4.0698 -;- 136 1 1.179 39546.3 1.0 7663 5462 13123 HBL1_DMSO_200M_050219_1,13127 HBL1_DMSO_200M_050219_1,13127,SPSVHPIASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13128 66.469 118.0 464230.0 25 0 78721.0 + 16738 KFIDKQLEL 9 88 378.5570316525335 1132.6492655578006 3 378.5567809939384 MULTI CID FTMS 0 0 0 13123 670317.125 0.3862829128779387 -2 0.1558456420898437 5 Unmodified _KFIDKQLEL_ ENSG00000116688|ENST00000235329|MFN2;nc|ENSG00000116688|O95140-2|MFN2 17.11289562659939 0.3734572693229295 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}DKQ 6 3 20.182 0.0 0.0 1.7819 0.0 0.0 0.0 370.200337070368 370.200337070368 5.578278345927217 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}DKQ 1.7819 + + 122 1 1.179 48903.1 1.0 7664 5462 13123 HBL1_DMSO_200M_050219_1,13128 HBL1_DMSO_200M_050219_1,13128,KFIDKQLEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13129 66.472 120.0 713750.0 25 0 91538.0 + 19171 LEEEKTLSL 9 117 531.2917068302032 1060.5688607272064 2 531.2919799685478 MULTI CID FTMS 0 0 0 13123 521353.84375 0.2670971699358954 2 -0.1325531005859375 6 Unmodified _LEEEKTLSL_ REV__ENSG00000168495|ENST00000306433|POLR3D 43.85829265575387 0.0542763391141878 3 {[TV]|[{I|L}S]}{I|L}EE{I|L}E[KT] 9 -1 + 58.598 0.0 0.0 5.5251 5.5251 83.036 0.0 0.0 0.0 19.735834254131102 4.762036441594191 4.762036441594191 6.211541250237325 0 0.7302046884880937 2.0 1.0994850021680094 0.0 {[TV]|[{I|L}S]}{I|L}EE{I|L}E[KT];{[TV]|[{I|L}S]}{I|L}EE{I|L}{[SA]|[TG]}S{I|L};{[TV]|[{I|L}S]}{I|L}EE{I|L}{[SA]|[TG]}TV;{[TV]|[{I|L}S]}{I|L}ES{[{M(Oxidation (M))|F}H]|[RQ]}[KT];{[TV]|[{I|L}S]}{I|L}[PS]VVY[PS];{[TV]|[{I|L}S]}{I|L}E[R{I|L}][DC]{I|L};{[TV]|[{I|L}S]}{I|L}ES{[MS]|[{M(Oxidation (M))|F}A]}VPV;{[TV]|[{I|L}S]}{I|L}E[R{I|L}][EC]V;{[QN]|[E{I|L}]|[KN]}EE[KT]{I|L}{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}E{I|L}K{I|L}[WM] 5.5251;4.9394;4.8847;3.9003;3.3106;3.2213;3.1842;3.1666;3.1611;3.0966 -;-;-;-;-;-;-;-;+;- + 758 + 1 1.179 69711.1 1.0 7665 5462 13123 HBL1_DMSO_200M_050219_1,13129 HBL1_DMSO_200M_050219_1,13129,LEEEKTLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13130 66.476 200.0 602330.0 25 0 59520.0 + 12616 GVITKGTVIEV 11 154 558.3371948471738 1114.6598367611475 2 558.3372070193291 MULTI CID FTMS 0 0 0 13123 389064.78125 0.1643955608124267 -3 0.2385406494140625 7 Unmodified _GVITKGTVIEV_ ENSG00000164346|ENST00000610426|NSA2 128.5786326129116 0.0503926172694709 3 [VG]{I|L}TKTGV{I|L}EV 11 2 + 116.67 0.0 0.0 10.467 10.467 90.756 0.0 0.0 0.0 4.858730222758652 15.070623213458036 4.858730222758652 4.858730222758652 0 2.234636880228201 1.6989700043360187 2.584121882396211 0.0 [VG]{I|L}TKTGV{I|L}EV;{[QN]|[E{I|L}]|[KN]}KKTGV{I|L}EV;[VG]{I|L}TKGTV{I|L}EV;{[QN]|[E{I|L}]|[KN]}KKGTV{I|L}EV;[VG]TK{I|L}TGV{I|L}EV;[VG]{I|L}TKEK{I|L}EV;{[TV]|[{I|L}S]}G{I|L}KTGV{I|L}EV;[{I|L}V]GTKTGV{I|L}EV;[VG]TKT{I|L}GV{I|L}EV;[{I|L}T][VG]KTGV{I|L}EV 10.467;10.031;9.6735;9.2376;8.876;8.801;8.7153;8.6893;8.6339;8.5124 -;-;+;-;-;-;-;-;-;- + 16071 1 1.179 95408.1 1.0 7666 5462 13123 HBL1_DMSO_200M_050219_1,13130 HBL1_DMSO_200M_050219_1,13130,GVITKGTVIEV True True GVITKGTVIEV 66.475776 558.337207019329 28815240.0 13123.0 ENSG00000164346|ENST00000610426|NSA2 5.436074733734131 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13131 66.485 512.0 523690.0 25 0 50019.0 + 42049 VQVDPGQVGL 10 204 506.2777438420572 0 506.2775756716728 PEAK CID FTMS 0 0 0 13123 290192.625 0.5396606997031279 1 -0.1020355224609375 8 Unmodified _VQVDPGQVGL_ ENSG00000198690|ENST00000362065|FAN1;nc|ENSG00000198690|Q9Y2M0-2|FAN1 49.55428908609986 0.051331770361836 3 VQVDVY 6 5 42.256 0.0 0.0 4.1815 0.0 0.0 188.1146174675144 116.0510729425414 304.1656904100558 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.2614393726401688 0.4247425010840047 VQVDVY 4.1815 - 2265 + 1 1.179 209586.2 1.0 7667 5462 13123 HBL1_DMSO_200M_050219_1,13131 HBL1_DMSO_200M_050219_1,13131,VQVDPGQVGL True True VQVDPGQVGL 66.484793 506.277575671673 5496577.0 13123.0 nc|ENSG00000198690|Q9Y2M0-2|FAN1;;ENSG00000198690|ENST00000362065|FAN1 5.459889888763428 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13132 66.494 518.0 445750.0 25 0 24102.0 -1 RCHRRRRRCCC 11 149 866.9067123982009 1731.7988718632016 2 866.9108764529228 MULTI CID FTMS 0 0 0 13123 291198.25 0.0152137206223744 -15 1.2302703857421875 9 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 3 [MN]PN{I|L}NADQNVD{M(Oxidation (M))|F}{I|L}Q 15 -1 + 113.12 0.0 0.0 6.5321 6.5321 83.847 0.0 0.0 0.0 8.519374645445623 14.273174902439578 8.519374645445623 3.978848682262964 0 1.7034021960761263 1.5228787452803376 0.91944517631652 1.7544321917401078 [MN]PN{I|L}NADQNVD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NWQNVD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NADQNKAQ{M(Oxidation (M))|F}Q;[MN]PN{I|L}NADQN{I|L}VD{M(Oxidation (M))|F}Q;{[CA]|SS}APN{I|L}NADQNVD{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}NADQNVD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}GGADQNVD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NADQGGVD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NAD[AG]NVD{M(Oxidation (M))|F}{I|L}Q 6.5321;6.3024;6.1458;6.063;6.0622;6.0402;6.0107;6.0107;6.0107;6.0107 -;-;-;-;-;-;-;-;-;- 13999 + 1 1.179 168160.1 1.0 7668 5462 13123 HBL1_DMSO_200M_050219_1,13132 HBL1_DMSO_200M_050219_1,13132,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13133 66.503 495.0 584780.0 25 0 60769.0 + 37820 TLTEEGVIKV 10 234 544.8132146657598 1087.6118763983195 2 544.8129150271416 MULTI CID FTMS 0 0 0 13123 249650.75 0.0301367327159898 7 -0.521575927734375 10 Unmodified _TLTEEGVIKV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 42.83518252547288 0.1276281763412153 3 [{I|L}T]TEVGE{I|L}KV 10 2 + 76.595 0.0 0.0 7.0425 7.0425 87.036 0.0 0.0 0.0 15.045795381876864 5.442346657979158 5.442346657979158 5.442346657979158 0 1.048455006504028 2.0 0.9947026752325154 0.1549471895720985 [{I|L}T]TEVGE{I|L}KV;[{I|L}T]TEVGE{I|L}VK;[{I|L}T]TEE[VG]{I|L}KV;[{I|L}T]TEV[KT]TPV;[{I|L}T]TEE[VG]{I|L}VK;[{I|L}T]TEV[KT]PTV;[{I|L}T]TEV[KT]PS{I|L};[{I|L}T]T[KT]VET[VP];[{I|L}T]TEV[KT]SP{I|L};[{I|L}T]TEVV{[NV]|[RG]}T{I|L} 7.0425;6.5421;6.4209;6.1202;5.9205;5.8029;5.7559;5.6591;5.4715;5.3297 -;-;+;-;-;-;-;-;-;- + 5730 + 1 1.179 222722.4 1.0 7669 5462 13123 HBL1_DMSO_200M_050219_1,13133 HBL1_DMSO_200M_050219_1,13133,TLTEEGVIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13134 66.507 249.0 529640.0 25 0 46964.0 + 9978 FPHHLQEYI 9 146 395.2016245324461 1182.5830441975384 3 395.2021362185478 MULTI CID FTMS 0 0 0 13123 207779.265625 0.4369546147750559 1 -0.1020355224609375 11 Unmodified _FPHHLQEYI_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 16.942295170755138 0.3780752226737986 3 HHP{I|L}K{M(Oxidation (M))|F}EY{I|L} 9 5 + 33.492 0.0 0.0 2.8321 2.8321 70.394 0.0 0.0 0.0 2.3164005948084494 7.587870862831714 2.3164005948084494 2.3164005948084494 0 0.1989700043360188 0.8860566476931632 0.0 0.0 HHP{I|L}K{M(Oxidation (M))|F}EY{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]K{M(Oxidation (M))|F}EY{I|L};HHP{M(Oxidation (M))|F}{I|L}QEY{I|L};HHP{I|L}{M(Oxidation (M))|F}QEY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{I|L}K{M(Oxidation (M))|F}EY{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]{M(Oxidation (M))|F}QEY{I|L};{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}H]|[RQ]}K{M(Oxidation (M))|F}EY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH{I|L}QEY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{M(Oxidation (M))|F}{I|L}QEY{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KQEY{I|L} 2.8321;2.6362;2.4286;2.1741;2.1308;1.9782;1.8256;1.7292;1.7274;1.7236 -;-;-;-;-;-;-;+;-;- + 957 1 1.179 107617.0 1.0 7670 5462 13123 HBL1_DMSO_200M_050219_1,13134 HBL1_DMSO_200M_050219_1,13134,FPHHLQEYI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13135 66.521 799.0 184160.0 25 0 17065.0 + 40164 VGPFVSKI 8 151 423.7577697348455 845.500986536491 2 423.7580139040947 MULTI CID FTMS 0 0 0 13123 125432.609375 0.5317288863839575 1 -0.1020355224609375 12 Unmodified _VGPFVSKI_ ENSG00000148090|ENST00000375731|AUH 41.8396318013385 0.2035142800366642 3 VGP{M(Oxidation (M))|F}VSK{I|L} 8 0 + 81.165 0.0 0.0 9.5996 9.5996 87.292 0.0 0.0 0.0 23.399480616943507 12.86306738843274 12.86306738843274 2.8258344212375164 0 0.9049471895720984 1.6989700043360187 0.0 0.0 + + VGP{M(Oxidation (M))|F}VSK{I|L};VG{I|L}MVSK{I|L};VGP{M(Oxidation (M))|F}VS{I|L}K;VGP{M(Oxidation (M))|F}V{I|L}SK;VG{I|L}MVS{I|L}K;VG{I|L}MV{I|L}SK;VGP{M(Oxidation (M))|F}V[KT]V;VG{I|L}MV[KT]V;VGP{[VA]|[{I|L}G]}YK{I|L};VG{I|L}[PG]YK{I|L} 9.5996;9.2654;8.0783;7.8435;7.7441;7.5093;7.2883;6.9541;6.6729;5.8363 +;-;-;-;-;-;-;-;-;- + 462 + 1 1.179 118697.2 1.0 7671 5462 13123 HBL1_DMSO_200M_050219_1,13135 HBL1_DMSO_200M_050219_1,13135,VGPFVSKI False True VGPFVSKI 66.521107 423.758013904095 2011463.375 13123.0 ENSG00000148090|ENST00000375731|AUH 4.379393895467122 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13136 66.535 800.0 263110.0 25 0 35985.0 + 40552 VKCILKTLI 9 212 344.22722146632816 1029.6598349991846 3 344.2266723513603 MULTI CID FTMS 0 0 0 13123 121048.796875 0.4455092779701431 -3 0.2385406494140625 13 Unmodified _VKCILKTLI_ REV__ENSG00000069667|ENST00000335670|RORA;REV__nc|ENSG00000069667|P35398-1|RORA;REV__nc|ENSG00000069667|P35398-3|RORA;REV__nc|ENSG00000069667|P35398-4|RORA 13.614867670302877 0.4681447649821485 3 AT{I|L}{I|L} 4 -1 35.962 0.0 0.0 3.4926 0.0 0.0 613.3917713849625 0.0 613.3917713849625 0.0 19.195925227640984 0.0 0.0 0 0.4247425010840047 0.0 0.7302046884880937 0.0 AT{I|L}{I|L} 3.4926 - 209 1 1.179 170755.9 0.8899999856948853 7672 5462 13123 HBL1_DMSO_200M_050219_1,13136 HBL1_DMSO_200M_050219_1,13136,VKCILKTLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13137 66.55 768.0 513510.0 25 0 71995.0 + 41343 VPITTPAAL 9 244 441.768096782794 881.5216406323881 2 441.7682067751884 MULTI CID FTMS 0 0 0 13123 120000.6796875 0.2207284543807452 10 -0.7423629760742188 14 Unmodified _VPITTPAAL_ REV__ENSG00000185101|ENST00000332826|ANO9;REV__ENST00000528927.5_1_11:431754-441926:-|nuORF;REV__ENST00000532094.5_1_11:433312-441926:-|nuORF;REV__nc|ENSG00000185101|A1A5B4-3|ANO9 63.562846038646086 0.0241094678104353 3 VP{I|L} 3 -1 47.669 0.0 0.0 5.4075 0.0 0.0 0.0 569.2933443658811 569.2933443658811 8.672244345201705 0.0 0.0 0.0 0 0.7491348669726234 1.6989700043360187 0.0 0.0 VP{I|L} 5.4075 + + 1890 + 1 1.179 303026.1 1.0 7673 5462 13123 HBL1_DMSO_200M_050219_1,13137 HBL1_DMSO_200M_050219_1,13137,VPITTPAAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13138 66.561 676.0 302010.0 25 0 33479.0 + 16333 IYHTINTSPF 10 182 596.8036534751532 1191.5927540171062 2 596.8038207888603 MULTI CID FTMS 0 0 0 13123 109494.4609375 0.3355423765301516 -3 0.2385406494140625 15 Unmodified _IYHTINTSPF_ ENST00000370331.5_1_1:93201975-93202140:-|nuORF 62.57269311338072 0.0298375429882549 3 [H{I|L}]YT{I|L}NTSP{M(Oxidation (M))|F} 10 2 + 59.412 0.0 0.0 4.9859 4.9859 83.577 0.0 0.0 0.0 18.37272702502299 14.494011517474526 14.494011517474526 9.16453948549924 0 0.9802046884880938 1.5228787452803376 1.885151878060192 0.0 [H{I|L}]YT{I|L}NTSP{M(Oxidation (M))|F};[H{I|L}]YT{I|L}GGTSP{M(Oxidation (M))|F};[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}NTSP{M(Oxidation (M))|F};[H{I|L}]YTK{[CP]|[EA]}SP{M(Oxidation (M))|F};{[WN]|[YH]}{I|L}T{I|L}NTSP{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[WQ]{I|L}NTSP{M(Oxidation (M))|F};[H{I|L}]YT{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}YV;[H{I|L}]Y[VP]NTSYV;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}GGTSP{M(Oxidation (M))|F};[{I|L}T]{[WN]|[YH]}{I|L}NTSP{M(Oxidation (M))|F} 4.9859;4.2168;3.444;3.3568;3.3075;3.3034;2.7267;2.6824;2.678;2.5935 -;-;-;-;-;-;-;-;-;- 2388 1 1.179 152182.5 1.0 7674 5462 13123 HBL1_DMSO_200M_050219_1,13138 HBL1_DMSO_200M_050219_1,13138,IYHTINTSPF True True IYHTINTSPF 66.561444 596.80382078886 3970758.25 13123.0 ENST00000370331.5_1_1:93201975-93202140:-|nuORF 4.04699444770813 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13140 66.565 8.3 7983500.0 25 0 1409200.0 + 44599 YPFKPPKI 8 78 330.5321852651292 988.5747263955876 3 330.5320312380791 MULTI CID FTMS 0 0 0 13139 3735026.75 0.2135257839541582 11 -0.7952804565429688 1 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 3 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 39.855 0.0 0.0 4.0316 4.0316 71.481 0.0 0.0 0.0 17.17925823161346 6.623411089738568 6.623411089738568 1.2937092834840769 0 0.3054621874040891 0.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 4.0316;3.9007 +;- + 112 + 1 1.172 60230.9 1.0 7675 5463 13139 HBL1_DMSO_200M_050219_1,13140 HBL1_DMSO_200M_050219_1,13140,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13141 66.567 18.0 2288000.0 25 0 441580.0 + 3029 AVLDLVHSA 9 60 462.7618255664855 923.509098199771 2 462.7611572146416 MULTI CID FTMS 0 0 0 13139 2053915.5 0.6851685349591689 -1 0.1020355224609375 2 Unmodified _AVLDLVHSA_ ENSG00000142544|ENST00000421832|CTU1;ENST00000598755.1_1_19:52104581-52104959:+|nuORF 26.88365393820708 0.1891292719743517 3 {[VA]|[{I|L}G]}{I|L}D{I|L}V 6 3 52.664 0.0 0.0 5.7026 0.0 0.0 0.0 310.1159532919446 310.1159532919446 20.268024924119672 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[VA]|[{I|L}G]}{I|L}D{I|L}V 5.7026 + + 97 + 1 1.172 36477.2 1.0 7676 5463 13139 HBL1_DMSO_200M_050219_1,13141 HBL1_DMSO_200M_050219_1,13141,AVLDLVHSA False True AVLDLVHSA 66.566667 462.761157214642 53974968.0 13139.0 ENST00000598755.1_1_19:52104581-52104959:+|nuORF;;ENSG00000142544|ENST00000421832|CTU1 6.766956965128581 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13142 66.568 5.3 6160200.0 25 0 1295200.0 118 AALAALALA 9 58 392.7487775150557 783.4830020969115 2 392.7485534548759 MULTI CID FTMS 0 0 0 13139 3667037.75 0.4675905512232716 -1 0.1020355224609375 3 Unmodified _AALAALALA_ ENSG00000170801|ENST00000307358|HTRA3;ENSG00000267221|ENST00000587304|C17orf113;nc|ENSG00000170801|P83110-2|HTRA3;REV__ENSG00000131507|ENST00000253814|NDFIP1;REV__ENST00000509436.1_1_5:141488539-141511465:+|nuORF;REV__nc|ENSG00000131507|Q9BT67-2|NDFIP1 0.0 0.9146841635160942 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.172 30259.6 1.0 7677 5463 13139 HBL1_DMSO_200M_050219_1,13142 HBL1_DMSO_200M_050219_1,13142,AALAALALA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13143 66.569 9.6 4273900.0 25 0 363530.0 + 3668 DAENAMRYI 9 74 541.7501112633328 1081.4856695934654 2 541.7505370974541 MULTI CID FTMS 0 0 0 13139 3322067.5 0.1567838601421994 -5 0.4776153564453125 4 Unmodified _DAENAMRYI_ ENSG00000114503|ENST00000321256|NCBP2;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;ENST00000479647.1_1_3:196664263-196668636:-|nuORF;nc|ENSG00000114503|P52298-2|NCBP2 65.23502041540118 0.0231836506122253 3 {[DA]|[EG]}ENAMRY{I|L} 9 0 + 88.519 0.0 0.0 8.185 8.185 93.442 0.0 0.0 0.0 72.32126347338021 10.243371891081424 10.243371891081424 9.208187539523747 0 1.305462187404089 2.0 0.3494850021680094 0.8494850021680094 + + {[DA]|[EG]}ENAMRY{I|L};{[DA]|[EG]}EGGAMRY{I|L};WENAM[VG]Y{I|L};{[DA]|[EG]}E[C(Carbamidomethyl (C))R][VG]Y{I|L};WEGGAM[VG]Y{I|L};{[DA]|[EG]}[WQ]M[VG]Y{I|L};{[DA]|[EG]}GA{[WT]|[RM]}WY{I|L};{[DA]|[EG]}Q{[WT]|[RM]}WY{I|L};{[DA]|[EG]}GA{[WT]|[RM]}[Y{I|L}]W;{[DA]|[EG]}Q{[WT]|[RM]}[Y{I|L}]W 8.185;7.3335;6.3357;5.2741;4.6987;4.0959;3.1676;3.1453;2.553;2.5307 +;-;-;-;-;-;-;-;-;- + 121 + 1 1.172 37176.3 1.0 7678 5463 13139 HBL1_DMSO_200M_050219_1,13143 HBL1_DMSO_200M_050219_1,13143,DAENAMRYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13144 66.57 11.0 5054600.0 25 0 541360.0 + 42886 VVPAALKVV 9 73 448.3025612293231 894.5905695254462 2 448.3029662966728 MULTI CID FTMS 0 0 0 13139 3052351.0 0.3070545826348611 -2 0.222442626953125 5 Unmodified _VVPAALKVV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 34.10243960390752 0.1078313939113124 3 VVPAA{I|L}KVV 9 0 + 44.027 0.0 0.0 4.9214 4.9214 88.107 0.0 0.0 0.0 17.418118174980172 7.371250542002343 7.371250542002343 44.02671303049303 0 0.3494850021680094 2.0 0.0 0.0 + + VVPAA{I|L}KVV 4.9214 + + 189 + 1 1.172 48816.9 1.0 7679 5463 13139 HBL1_DMSO_200M_050219_1,13144 HBL1_DMSO_200M_050219_1,13144,VVPAALKVV True True VVPAALKVV 66.570202 448.302966296673 302474208.0 13139.0 ENST00000468655.1_1_19:49994004-49994437:+|nuORF;;nc|ENSG00000293056|Q6NVV1|RPL13AP3;;ENSG00000142541|ENST00000391857|RPL13A 6.7397158940633135 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13145 66.571 13.0 1834000.0 25 0 106290.0 -1 0 43 902.9182248884156 1803.8218968436315 2 903.4182006716728 MULTI CID FTMS 0 0 0 13139 2056734.125 0.5949308133584874 -1 0.1020355224609375 6 3 {I|L}Q 2 -1 19.196 0.0 0.0 1.0642 0.0 0.0 1544.6683151559344 0.0 1544.6683151559344 0.0 8.226825097560422 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 {I|L}Q 1.0642 - 17 + 1 1.172 21331.2 1.0 7680 5463 13139 HBL1_DMSO_200M_050219_1,13145 HBL1_DMSO_200M_050219_1,13145, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13146 66.573 18.0 2115300.0 25 0 323350.0 + 3959 DALNRPLNI 9 77 513.2901212752786 1024.565689617357 2 513.2909423708916 MULTI CID FTMS 0 0 0 13139 1571373.125 0.5597041307202556 -2 0.222442626953125 7 Unmodified _DALNRPLNI_ ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2 66.45667989310934 0.0225072657982126 3 {[DA]|[EG]}{I|L}NR[{I|L}P]N{I|L} 9 0 + 86.009 0.0 0.0 8.3947 8.3947 93.703 0.0 0.0 0.0 71.52825504574881 12.587418566968154 12.587418566968154 9.208187539523747 0 2.3494850021680094 2.0 0.0 1.1421590589602533 + + {[DA]|[EG]}{I|L}NR[{I|L}P]N{I|L};{[DA]|[EG]}{I|L}N[VG][{I|L}P]N{I|L};{[DA]|[EG]}{I|L}GGR[{I|L}P]N{I|L};{[DA]|[EG]}{I|L}NR[{I|L}P]GG{I|L};{NN|[MP]|[D{I|L}]|[EV]}ANR[{I|L}P]N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P[TP][VS]AN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P[RN][KG]N{I|L};[{I|L}P]N[TP][VS]AN{I|L};[{I|L}P]N[RN][KG]N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P[TP][VS]{I|L}{[QG]|[NA]} 8.3947;7.4959;7.4959;7.1243;3.865;2.5171;2.1733;1.8035;1.4597;0.02277 +;-;-;-;-;-;-;-;-;- + 165 + 1 1.172 33713.4 1.0 7681 5463 13139 HBL1_DMSO_200M_050219_1,13146 HBL1_DMSO_200M_050219_1,13146,DALNRPLNI True True DALNRPLNI 66.572575 513.290942370892 36763896.0 13139.0 ENSG00000105576|ENST00000425528|TNPO2;;nc|ENSG00000105576|O14787-2|TNPO2;;ENST00000588484.1_1_19:12826020-12830096:-|nuORF 7.229609171549479 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13147 66.574 12.0 2018400.0 25 0 169100.0 44606 YPFKPPKI 8 47 495.29454849115496 988.57454404911 2 495.2948486208916 MULTI CID FTMS 0 0 0 13139 1144807.25 0.1162576416726167 11 -0.7952804565429688 8 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 8.593279151180031 0.7721714526254883 3 Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K 4 4 16.198 0.0 0.0 1.6385 0.0 0.0 0.0 450.2729482217356 450.2729482217356 6.016826719611714 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K 1.6385 + + 8 + 1 1.172 27428.5 1.0 7682 5463 13139 HBL1_DMSO_200M_050219_1,13147 HBL1_DMSO_200M_050219_1,13147,YPFKPPKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13148 66.575 17.0 1891500.0 25 0 138130.0 + 27385 PIFNAIVSL 9 66 487.2894483836528 972.5643438341056 2 487.2883178591728 MULTI CID FTMS 0 0 0 13139 1106834.0 0.1774998294094295 3 -0.1669769287109375 9 Unmodified _PIFNAIVSL_ REV__ENSG00000125630|ENST00000263331|POLR1B;REV__nc|ENSG00000125630|Q9H9Y6-2|POLR1B;REV__nc|ENSG00000125630|Q9H9Y6-3|POLR1B;REV__nc|ENSG00000125630|Q9H9Y6-4|POLR1B;REV__nc|ENSG00000125630|Q9H9Y6-5|POLR1B 21.74664581756881 0.2544899275067181 3 [{M(Oxidation (M))|F}V]V 3 -1 25.062 0.0 0.0 2.5769 0.0 0.0 0.0 624.3467501275999 624.3467501275999 2.960893593153948 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]V 2.5769 - 37 + 1 1.172 31879.4 1.0 7683 5463 13139 HBL1_DMSO_200M_050219_1,13148 HBL1_DMSO_200M_050219_1,13148,PIFNAIVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13149 66.576 25.0 1392300.0 25 0 191590.0 28968 QDKVRQAL 8 68 479.2771095849216 956.5396662366433 2 479.2772399783134 MULTI CID FTMS 0 0 0 13139 992203.9375 0.5536092738949672 3 -0.1669769287109375 10 Unmodified _QDKVRQAL_ ENST00000443120.5_1_2:97505679-97506290:-|nuORF 5.230669730166228 0.792582437072536 3 {I|L} 1 7 13.495 0.0 0.0 1.4108 0.0 0.0 825.4445409698448 0.0 825.4445409698448 0.0 -1.1978875828839364 -1.1978875828839364 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4108 + + 4 + 1 1.172 33529.0 1.0 7684 5463 13139 HBL1_DMSO_200M_050219_1,13149 HBL1_DMSO_200M_050219_1,13149,QDKVRQAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13150 66.577 32.0 1693800.0 25 0 165670.0 + 30148 QVPDDLPNV 9 92 498.75337855656295 995.492204179926 2 498.7534057497978 MULTI CID FTMS 0 0 0 13139 781912.5625 0.2765574343069485 2 -0.1004257202148437 11 Unmodified _QVPDDLPNV_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 20.453626601364224 0.2830276176381075 3 [DP]D{I|L}QV 6 4 35.679 0.0 0.0 3.5841 0.0 0.0 0.0 325.1524280778187 325.1524280778187 10.494074394512118 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.3807196863200844 0.0 [DP]D{I|L}QV 3.5841 - 251 1 1.172 50297.8 1.0 7685 5463 13139 HBL1_DMSO_200M_050219_1,13150 HBL1_DMSO_200M_050219_1,13150,QVPDDLPNV False True QVPDDLPNV 66.57729 498.753405749798 62992566.0 13139.0 ENSG00000080345|ENST00000444746|RIF1;;nc|ENSG00000080345|Q5UIP0-2|RIF1 4.892450491587321 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13151 66.578 36.0 1193100.0 25 0 124060.0 + 30007 QTISALIKA 9 92 472.79166132949246 943.5687697257848 2 472.7924987673759 MULTI CID FTMS 0 0 0 13139 694094.625 0.4915007281220823 -2 0.222442626953125 12 Unmodified _QTISALIKA_ ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF 29.081581746732265 0.1611639662936252 3 {[TV]|[{I|L}S]}PNA{I|L} 6 6 30.979 0.0 0.0 3.2832 0.0 0.0 0.0 345.2138773877103 345.2138773877103 3.354254107815322 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.3807196863200844 0.9247425010840048 {[TV]|[{I|L}S]}PNA{I|L} 3.2832 - 267 1 1.172 38421.1 1.0 7686 5463 13139 HBL1_DMSO_200M_050219_1,13151 HBL1_DMSO_200M_050219_1,13151,QTISALIKA False True QTISALIKA 66.578467 472.792498767376 9113042.0 13139.0 ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 4.312310536702474 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13152 66.58 35.0 1326200.0 25 0 161890.0 44414 YLYYKLAY 8 70 548.7871573969668 1095.5597618607335 2 548.7880126833916 MULTI CID FTMS 0 0 0 13139 680045.75 0.1327831177624035 3 -0.1669769287109375 13 Unmodified _YLYYKLAY_ ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11 20.871210003555333 0.6025813472596342 3 Y{I|L}D 3 6 52.435 0.0 0.0 4.7861 0.0 0.0 0.0 701.3633389250336 701.3633389250336 36.95046257204389 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 Y{I|L}D 4.7861 - 122 + 1 1.172 43227.6 1.0 7687 5463 13139 HBL1_DMSO_200M_050219_1,13152 HBL1_DMSO_200M_050219_1,13152,YLYYKLAY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13153 66.581 50.0 738110.0 25 0 105020.0 + -1 SPPLLAPA 8 91 404.2334507410288 806.4523485488577 2 404.2320129275322 MULTI CID FTMS 0 0 0 13139 627864.0 0.2799964323938637 3 -0.1669769287109375 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SPPLLAPA_ REV__ENST00000369784.7_1_1:110884272-110884314:+|nuORF 0.7936320650641473 0.8195151834710337 3 {I|L} 1 -1 9.8329 0.0 0.0 1.2193 0.0 0.0 675.3571317293249 0.0 675.3571317293249 0.0 4.348331157524967 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2193 + + 2 + 1 1.172 37016.6 1.0 7688 5463 13139 HBL1_DMSO_200M_050219_1,13153 HBL1_DMSO_200M_050219_1,13153,SPPLLAPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13154 66.582 36.0 1290300.0 25 0 97724.0 + 41392 VPLAKGTLI 9 81 456.2995620630855 910.584571192971 2 456.3000976443291 MULTI CID FTMS 0 0 0 13139 560366.375 0.3859563617228709 3 -0.1669769287109375 15 Unmodified _VPLAKGTLI_ ENSG00000119285|ENST00000366582|HEATR1 13.90604991867851 0.4602628045680013 3 VP{I|L} 3 6 24.737 0.0 0.0 2.7166 0.0 0.0 0.0 598.3577974908811 598.3577974908811 1.8052345079578915 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 + VP{I|L} 2.7166 + + 45 + 1 1.172 42530.7 1.0 7689 5463 13139 HBL1_DMSO_200M_050219_1,13154 HBL1_DMSO_200M_050219_1,13154,VPLAKGTLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13155 66.584 109.0 608710.0 25 0 94650.0 + 32375 RYQDAIRVF 9 92 584.318053543116 1166.621554153032 2 584.3182250857353 MULTI CID FTMS 0 0 0 13139 361374.9375 0.176261176064033 3 -0.1669769287109375 16 Unmodified _RYQDAIRVF_ ENSG00000100129|ENST00000652021|EIF3L;ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L 14.40537977576856 0.4467465336100671 3 R{I|L}A 3 7 12.664 0.0 0.0 1.0855 0.0 0.0 264.1495333861897 559.2284149659121 823.3779483521018 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 R{I|L}A 1.0855 - 68 + 1 1.172 54647.1 1.0 7690 5463 13139 HBL1_DMSO_200M_050219_1,13155 HBL1_DMSO_200M_050219_1,13155,RYQDAIRVF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13156 66.586 65.0 425870.0 25 0 28342.0 21743 LPMDYVQRV 9 59 560.7941034205686 1119.5736539079371 2 561.2966796755791 MULTI CID FTMS 0 0 0 13139 406514.03125 0.116160282584067 8 -0.5972213745117188 17 Unmodified _LPMDYVQRV_ ENSG00000179115|ENST00000314606|FARSA;nc|ENSG00000179115|Q9Y285-2|FARSA 13.614867670302877 0.4681447649821485 3 [{I|L}P]MD[YV][RN]{I|L} 9 2 + 30.925 0.0 0.0 2.7622 2.7622 82.036 0.0 0.0 0.0 19.331524890261008 2.96143408385754 2.96143408385754 30.92531870338307 0 0.3807196863200844 1.3979400086720375 0.0 0.3807196863200844 [{I|L}P]MD[YV][RN]{I|L} 2.7622 - 21 + 1 1.172 29100.7 1.0 7691 5463 13139 HBL1_DMSO_200M_050219_1,13156 HBL1_DMSO_200M_050219_1,13156,LPMDYVQRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13157 66.592 324.0 450030.0 25 0 55799.0 + 45617 YVLDRDDLVEA 11 130 654.3296676509129 1306.6447823686258 2 654.3314086794853 MULTI CID FTMS 0 0 0 13139 336731.5625 0.9408729064846336 2 -0.1004257202148437 18 Unmodified _YVLDRDDLVEA_ ENSG00000146834|ENST00000310512|MEPCE;nc|ENSG00000289690|Q7L2J0-2|MEPCE 23.80106514851385 0.5333463718001408 3 [YN]S{I|L}HVY{I|L}V{[CP]|[EA]} 11 6 + 54.517 0.0 0.0 4.1723 4.1723 74.694 0.0 0.0 0.0 4.436974992327123 5.752574989159953 4.436974992327123 3.0102999566398125 0 0.2742275032520141 1.5228787452803376 0.3807196863200844 0.0 [YN]S{I|L}HVY{I|L}V{[CP]|[EA]};[YN]S{I|L}HV{I|L}YV{[CP]|[EA]};[YV]QSHVY{I|L}V{[CP]|[EA]};[YN]S{I|L}HVY{I|L}E{[VA]|[{I|L}G]};[YV]QSHV{I|L}YV{[CP]|[EA]};[YN]S{I|L}H{I|L}VYV{[CP]|[EA]};[YN]S{I|L}HV{I|L}YE{[VA]|[{I|L}G]};[YN]{I|L}SHVY{I|L}V{[CP]|[EA]};[YV]QSHVY{I|L}E{[VA]|[{I|L}G]};[YN]S{I|L}HV{I|L}VY{[CP]|[EA]} 4.1723;3.9419;3.8327;3.7321;3.6024;3.5768;3.5017;3.4808;3.3925;3.2952 -;-;-;-;-;-;-;-;-;- 2505 1 1.172 111747.0 1.0 7692 5463 13139 HBL1_DMSO_200M_050219_1,13157 HBL1_DMSO_200M_050219_1,13157,YVLDRDDLVEA False True YVLDRDDLVEA 66.591933 654.331408679485 2797991.0 13139.0 nc|ENSG00000289690|Q7L2J0-2|MEPCE;;ENSG00000146834|ENST00000310512|MEPCE 6.040842215220134 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13159 66.596 3.2 12544000.0 25 0 3026800.0 + 42976 VVTPLPAA 8 61 384.23556222770833 766.4565715222167 2 384.2353088259697 MULTI CID FTMS 0 0 0 13158 18980858.0 0.9851404150897174 -1 0.030517578125 1 Unmodified _VVTPLPAA_ REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF 0.0 0.8243325171867699 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.172 37227.9 1.0 7693 5464 13158 HBL1_DMSO_200M_050219_1,13159 HBL1_DMSO_200M_050219_1,13159,VVTPLPAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13160 66.597 4.0 11481000.0 25 0 651880.0 + 24763 MPHLSMQQV 9 85 535.76056334272 1069.50657375224 2 535.7601196169853 MULTI CID FTMS 0 0 0 13158 11319450.0 1.0 0 0.0 2 Unmodified _MPHLSMQQV_ ENSG00000142207|ENST00000382751|URB1 42.09456458481378 0.0639583784996157 3 [AG]V[HN]SMQQV 10 4 + 39.761 0.0 0.0 3.7177 3.7177 69.221 0.0 0.0 0.0 4.218268236853284 9.457640437841874 4.218268236853284 0.4980376447570478 0 0.4929928190999391 1.6989700043360187 0.9247425010840048 0.0 [AG]V[HN]SMQQV;[AG]V[HN]SQMQV;[H{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}PMQQV;[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}SMQQV;[H{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}PQMQV;[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}SQMQV;[H{I|L}][WE]MQQV;[H{I|L}][WE]QMQV;[AG]V[HN]SM[AG]QV;[AG]V[HN]S[AG]MQV 3.7177;3.6711;3.3233;3.278;3.2767;3.2314;2.9537;2.9071;2.8608;2.8142 -;-;-;-;-;-;-;-;-;- 339 1 1.172 40278.5 1.0 7694 5464 13158 HBL1_DMSO_200M_050219_1,13160 HBL1_DMSO_200M_050219_1,13160,MPHLSMQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13161 66.598 6.3 4844600.0 25 0 438600.0 + 41202 VPENMEITV 9 61 516.2558955175426 1030.4972381018852 2 516.2561523318291 MULTI CID FTMS 0 0 0 13158 7586944.0 0.8860565183736334 -1 0.030517578125 3 Unmodified _VPENMEITV_ REV__ENSG00000132646|ENST00000379143|PCNA 18.13498045792455 0.3457906370836843 3 V 1 -1 15.485 0.0 0.0 1.5026 0.0 0.0 913.417684429325 0.0 913.417684429325 0.0 -4.69273760456403 -4.69273760456403 0.0 0 0.0 0.0 0.0 0.0 V 1.5026 + + 17 + 1 1.172 36007.4 1.0 7695 5464 13158 HBL1_DMSO_200M_050219_1,13161 HBL1_DMSO_200M_050219_1,13161,VPENMEITV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13162 66.6 20.0 2250000.0 25 0 276970.0 + 6111 DSVILRSI 8 61 451.7688633815617 901.5231738299234 2 451.7689391970634 MULTI CID FTMS 0 0 0 13158 2746175.75 0.5255433408676804 3 -0.2698211669921875 4 Unmodified _DSVILRSI_ ENSG00000073734|ENST00000650372|ABCB11 41.8396318013385 0.2035142800366642 3 {[DS]|[MA]|[CV]|TT}V{I|L}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 8 2 + 42.88 0.0 0.0 4.7564 4.7564 87.519 0.0 0.0 0.0 30.406075122407685 3.979400086720375 3.979400086720375 42.88032523080816 0 1.3494850021680094 0.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}V{I|L}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 4.7564 - 61 + 1 1.172 40259.7 1.0 7696 5464 13158 HBL1_DMSO_200M_050219_1,13162 HBL1_DMSO_200M_050219_1,13162,DSVILRSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13163 66.601 36.0 2091700.0 25 0 281120.0 + + 5775 DPPIARLSV 9 81 484.2819337659191 966.549314598638 2 484.2819702029228 MULTI CID FTMS 0 0 0 13158 2193016.25 1.0 0 0.0 5 Unmodified _DPPLNGKKV_ ENST00000526210.1_1_11:62402291-62407104:-|nuORF;nc|ENSG00000089597|Q14697-2|GANAB;ENST00000524437.5_1_11:62402291-62406896:-|nuORF;ENSG00000089597|ENST00000356638|GANAB 32.30548876998284 0.1201446275138228 3 DPP{I|L}A 5 -1 65.701 0.0 0.0 6.7975 0.0 0.0 0.0 470.2758883111938 470.2758883111938 49.90417829939986 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 DPP{I|L}A 6.7975 - 88 + 1 1.172 64072.3 1.0 7697 5464 13158 HBL1_DMSO_200M_050219_1,13163 HBL1_DMSO_200M_050219_1,13163,DPPLNGKKV False False DPPIARLSV 66.600719 484.281970202923 15345840.0 13158.0 ENST00000526210.1_1_11:62402291-62407104:-|nuORF;;nc|ENSG00000089597|Q14697-2|GANAB;;ENST00000524437.5_1_11:62402291-62406896:-|nuORF;;ENSG00000089597|ENST00000356638|GANAB 5.548966725667317 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13164 66.602 54.0 1055400.0 25 0 119120.0 + 18279 KVIGENDITL 10 99 551.310870277196 1100.607187621192 2 551.3110839724541 MULTI CID FTMS 0 0 0 13158 1703404.5 0.6788136692483755 4 -0.2971649169921875 6 Unmodified _KVIGENDITL_ ENSG00000150712|ENST00000382142|MTMR12;nc|ENSG00000150712|Q9C0I1-2|MTMR12;nc|ENSG00000150712|Q9C0I1-3|MTMR12 34.93206674587334 0.2110832994570416 3 [VG]VETQAA{I|L}T{I|L} 11 7 + 52.866 0.0 0.0 4.8033 4.8033 78.342 0.0 0.0 0.0 4.216689781749594 16.575773191777934 4.216689781749594 4.216689781749594 0 1.5356668758921828 1.6989700043360187 0.75 0.0 [VG]VETQAA{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}EE{I|L}AA{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}EE[RV]{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}EE{I|L}[RV]T{I|L};[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q[RV]T{I|L};[{I|L}P][RN]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[DA]|[EG]}[DN]{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[RK][WK]E{I|L};{[QN]|[E{I|L}]|[KN]}[RK][WQ]E{I|L};{[ES]|[DT]|[{I|L}C]}[R{I|L}]QN{I|L}E{I|L} 4.8033;4.4202;3.8267;3.8267;3.5312;3.4703;2.9792;2.5348;2.5348;1.9413 -;-;-;-;-;-;+;-;-;- + 286 1 1.172 49290.0 1.0 7698 5464 13158 HBL1_DMSO_200M_050219_1,13164 HBL1_DMSO_200M_050219_1,13164,KVIGENDITL False True KVIGENDITL 66.602123 551.311083972454 75395488.0 13158.0 nc|ENSG00000150712|Q9C0I1-3|MTMR12;;nc|ENSG00000150712|Q9C0I1-2|MTMR12;;ENSG00000150712|ENST00000382142|MTMR12 2.764436841011048 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13165 66.603 16.0 1776400.0 25 0 152120.0 + 12563 GVIDGHIYAV 10 68 522.2813048623098 1042.5480567914194 2 522.2816039919853 MULTI CID FTMS 0 0 0 13158 1551816.75 0.593949894486809 -1 0.030517578125 7 Unmodified _GVIDGHIYAV_ ENSG00000079999|ENST00000171111|KEAP1 21.74664581756881 0.480091245866545 3 AY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AV 6 7 20.45 0.0 0.0 1.9615 0.0 0.0 386.2538806213007 0.0 386.2538806213007 0.0 9.480844613864647 0.0 0.0 0 0.5 0.0 0.0 0.0 AY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AV 1.9615 - 97 + 1 1.172 30450.7 1.0 7699 5464 13158 HBL1_DMSO_200M_050219_1,13165 HBL1_DMSO_200M_050219_1,13165,GVIDGHIYAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13166 66.607 201.0 800720.0 25 0 123960.0 + 36472 TAASVLRI 8 128 415.75833303580447 829.502113138409 2 415.7582580447197 MULTI CID FTMS 0 0 0 13158 980529.375 0.4621963141832038 -4 0.2883987426757812 8 Unmodified _TAASVLRI_ ENSG00000119574|ENST00000594051|ZBTB45 85.27202061508552 0.0687763219216887 3 TAASV{I|L}R{I|L} 8 0 + 93.378 0.0 0.0 11.257 11.257 96.985 0.0 0.0 0.0 77.71656923834061 15.977795557774328 15.977795557774328 12.795000083553177 0 1.1382104921644451 2.0 0.4247425010840047 0.9947026752325154 + + TAASV{I|L}R{I|L};TAAS{I|L}VR{I|L};TAA{I|L}SVR{I|L};TA{I|L}[SG]{I|L}R{I|L};TA{I|L}ASVR{I|L};T[QT]V{I|L}R{I|L};T[QT]{I|L}VR{I|L} 11.257;9.7147;9.0037;8.3833;8.3754;4.1807;2.6382 +;-;-;-;-;-;- + 369 + 1 1.172 130919.0 1.0 7700 5464 13158 HBL1_DMSO_200M_050219_1,13166 HBL1_DMSO_200M_050219_1,13166,TAASVLRI True True TAASVLRI 66.607125 415.75825804472 33121502.0 13158.0 ENSG00000119574|ENST00000594051|ZBTB45 2.375032603740692 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13167 66.611 185.0 523920.0 25 0 142280.0 -1 0 98 617.3548563614072 616.3475798948072 1 617.3551513552666 MULTI CID FTMS 0 0 0 13158 896299.4375 0.4812261677832354 1 -0.0699081420898437 9 3 [{I|L}T]A{I|L}T 5 -1 35.63 0.0 0.0 5.7808 0.0 0.0 0.0 114.02626576810717 114.02626576810717 10.218618560633814 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.4916440611282626 0.0 [{I|L}T]A{I|L}T 5.7808 - 340 1 1.172 77128.5 1.0 7701 5464 13158 HBL1_DMSO_200M_050219_1,13167 HBL1_DMSO_200M_050219_1,13167, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13168 66.615 219.0 728860.0 25 0 175470.0 28506 PTKVIVPL 8 132 433.787826850308 865.5611007674161 2 433.7876769900322 MULTI CID FTMS 0 0 0 13158 799431.25 0.9421019297294444 -1 0.030517578125 10 Unmodified _PTKVIVPL_ ENST00000334512.9_1_10:81073174-81073993:+|nuORF 4.3292370932331545 0.7980541185046766 3 V 1 7 10.089 0.0 0.0 1.1656 0.0 0.0 748.4814860596997 0.0 748.4814860596997 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1656 + + 47 + 1 1.172 127161.1 1.0 7702 5464 13158 HBL1_DMSO_200M_050219_1,13168 HBL1_DMSO_200M_050219_1,13168,PTKVIVPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13169 66.619 202.0 533440.0 25 0 90388.0 + 23878 LVLGGGGG 8 110 629.3638351784929 628.3565587118928 1 629.3635131716728 MULTI CID FTMS 0 0 0 13158 727577.5625 1.0 0 0.0 11 Unmodified _LVLGGGGG_ REV__ENST00000484021.5_1_22:38453431-38470088:+|nuORF;REV__ENST00000543571.5_1_6:150023374-150039241:-|nuORF;REV__nc|ENSG00000100151|Q9NRD5-2|PICK1 2.889219685676258 0.8067950007271085 3 [TA]V 3 -1 24.437 0.0 0.0 3.889 0.0 0.0 0.0 354.179562212146 354.179562212146 2.64136888583522 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [TA]V 3.889 - 81 1 1.172 86622.8 1.0 7703 5464 13158 HBL1_DMSO_200M_050219_1,13169 HBL1_DMSO_200M_050219_1,13169,LVLGGGGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13170 66.623 225.0 1195400.0 25 0 223730.0 + 38142 TPMTVPRI 8 178 457.75895357862527 0 457.7582885622978 PEAK CID FTMS 0 0 0 13158 745111.75 1.0 0 0.0 12 Unmodified _TPMTVPRI_ ENSG00000163376|ENST00000417314|KBTBD8;nc|ENSG00000163376|Q8NFY9-2|KBTBD8 52.268347100219714 0.1012405820311161 3 PMTV{I|L} 5 3 37.237 0.0 0.0 4.0763 0.0 0.0 101.04488731533054 268.1425875299438 369.1874748452743 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.6989700043360187 0.0 PMTV{I|L} 4.0763 - 424 + 1 1.172 203328.5 1.0 7704 5464 13158 HBL1_DMSO_200M_050219_1,13170 HBL1_DMSO_200M_050219_1,13170,TPMTVPRI True True TPMTVPRI 66.622939 457.758288562298 18970168.0 13158.0 nc|ENSG00000163376|Q8NFY9-2|KBTBD8;;ENSG00000163376|ENST00000417314|KBTBD8 5.010868310928345 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13171 66.628 249.0 776240.0 25 0 87909.0 + 4324 DARVAITI 8 137 429.7562772130093 857.4980014928186 2 429.7563659548759 MULTI CID FTMS 0 0 0 13158 644622.375 0.6530051655616057 -1 0.030517578125 13 Unmodified _DARVAITI_ ENSG00000102858|ENST00000262370|MGRN1;ENSG00000141576|ENST00000269391|RNF157;nc|ENSG00000102858|O60291-3|MGRN1;nc|ENSG00000102858|O60291-4|MGRN1;nc|ENSG00000102858|O60291|MGRN1;nc|ENSG00000141576|Q96PX1-2|RNF157 47.74868867922204 0.1498366402366518 3 {[DA]|[EG]}RVA{I|L}T{I|L} 8 0 + 55.988 0.0 0.0 6.5293 6.5293 90.791 0.0 0.0 0.0 12.463852113694116 16.40978057358332 12.463852113694116 11.413601447542687 0 0.805462187404089 1.3010299956639813 0.4247425010840047 0.4793036574208875 + + {[DA]|[EG]}RVA{I|L}T{I|L};{[DA]|[EG]}G[R{I|L}]{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[QA]A{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[RN]{I|L}T{I|L};[{I|L}T][RN]{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[R{I|L}]{I|L}T{I|L};[KP]{[ES]|[DT]|[{I|L}C]}A{I|L}T{I|L};[KP]{[WT]|[RM]}{I|L}T{I|L};{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}T{I|L};{[VA]|[{I|L}G]}[RD]A{I|L}T{I|L} 6.5293;5.1982;5.0758;5.0343;4.4388;4.1674;3.4227;3.3812;3.2114;3.2075 +;-;-;-;-;-;-;-;-;- + 292 1 1.172 151041.7 1.0 7705 5464 13158 HBL1_DMSO_200M_050219_1,13171 HBL1_DMSO_200M_050219_1,13171,DARVAITI False True DARVAITI 66.627562 429.756365954876 6650388.0 13158.0 nc|ENSG00000102858|O60291-4|MGRN1;;nc|ENSG00000102858|O60291-3|MGRN1;;nc|ENSG00000141576|Q96PX1-2|RNF157;;nc|ENSG00000102858|O60291|MGRN1;;ENSG00000141576|ENST00000269391|RNF157;;ENSG00000102858|ENST00000262370|MGRN1 3.336822748184204 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13172 66.629 72.0 830600.0 25 0 65067.0 + 37732 TLQNGRLSL 9 120 501.2911762178067 1000.5677995024134 2 501.2941467165947 MULTI CID FTMS 0 0 0 13158 573830.8125 0.1572200377384544 -10 0.8477401733398438 14 Unmodified _TLQNGRLSL_ REV__ENSG00000255690|ENST00000539664|TRIL 19.256988751693697 0.3154191944385105 3 [{I|L}T]Q 3 -1 13.656 0.0 0.0 1.3648 0.0 0.0 0.0 655.3549143307915 655.3549143307915 1.437587049193441 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.2396518287104437 0.0 [{I|L}T]Q 1.3648 + + 150 1 1.172 49349.4 1.0 7706 5464 13158 HBL1_DMSO_200M_050219_1,13172 HBL1_DMSO_200M_050219_1,13172,TLQNGRLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13173 66.634 258.0 775180.0 25 0 29491.0 + 43346 WNPRRWWRWCW 11 149 866.4161607997353 0 866.4160034060478 PEAK CID FTMS 0 0 0 13158 497029.25 0.1159107395241339 -4 0.2883987426757812 15 Unmodified _WNPRRWWRWCW_ ENST00000564348.5_1_19:7982609-7983760:+|nuORF;ENST00000566166.1_1_19:7982552-7983971:+|nuORF 0.0 0.4761840153648598 3 TPN{I|L}NADQRRD 11 10 75.875 0.0 0.0 4.3838 0.0 0.0 144.06869747662046 303.1472567193969 447.2159541960174 0.0 0.0 0.0 0.0 0 1.1866654986684733 0.0 0.5796896906561032 2.278659694992122 TPN{I|L}NADQRRD 4.3838 - 71235 + 1 1.172 138589.4 1.0 7707 5464 13158 HBL1_DMSO_200M_050219_1,13173 HBL1_DMSO_200M_050219_1,13173,WNPRRWWRWCW False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13174 66.639 265.0 604230.0 25 0 95751.0 + 44853 YPPGSTVLV 9 94 932.5096698587798 931.5023933921798 1 932.5104247927666 MULTI CID FTMS 0 0 0 13158 470180.75 0.4327511807782316 12 -0.9105758666992188 16 Unmodified _YPPGSTVLV_ ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 101.72198241140316 0.010086100337927 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PGSTV{I|L}V 9 0 + 76.698 0.0 0.0 8.2338 8.2338 95.302 0.0 0.0 0.0 22.632192780232785 35.728590856097995 22.632192780232785 13.037275116073346 0 0.6989700043360187 1.6989700043360187 1.4916440611282626 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PGSTV{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PGSTVV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PG{[WT]|[RM]}{I|L}V;{[DA]|[EG]}[VG]VPY{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PG{[WT]|[RM]}V{I|L};{[DA]|[EG]}[VG]PVY{I|L}V;{[DA]|[EG]}{I|L}AAPY{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[TA][TA]{I|L}V;{[DA]|[EG]}[VG]PYV{I|L}V;{[DA]|[EG]}{I|L}{[DS]|[MA]|[CV]|TT}TV{I|L}V 8.2338;6.8342;5.6774;4.5008;4.2778;4.2612;4.0868;4.0773;4.0368;3.9219 +;-;-;-;-;-;-;-;-;- + 620 1 1.172 109026.5 1.0 7708 5464 13158 HBL1_DMSO_200M_050219_1,13174 HBL1_DMSO_200M_050219_1,13174,YPPGSTVLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13175 66.645 317.0 536780.0 25 0 40743.0 28656 PVLKEAAP 8 181 412.7463770871613 823.4782012411226 2 412.7463561892509 MULTI CID FTMS 0 0 0 13158 352541.125 0.2587223998565267 7 -0.5667037963867188 17 Unmodified _PVLKEAAP_ ENST00000496314.1_1_13:45009145-45009418:-|nuORF 10.183394434864962 0.7604730176254005 3 [VP]{I|L}K 4 4 16.955 0.0 0.0 2.059 0.0 0.0 0.0 383.1549950245789 383.1549950245789 3.4678748622465605 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 + [VP]{I|L}K 2.059 + + 142 1 1.172 132614.5 1.0 7709 5464 13158 HBL1_DMSO_200M_050219_1,13175 HBL1_DMSO_200M_050219_1,13175,PVLKEAAP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13176 66.651 326.0 593750.0 25 0 70267.0 + 37981 TNGSVKAI 8 179 395.2269009327692 788.4392489323384 2 395.2274352908134 MULTI CID FTMS 0 0 0 13158 359152.125 0.9417011235894294 1 -0.0699081420898437 18 Unmodified _TNGSVKAI_ REV__ENSG00000179270|ENST00000331664|PCARE 2.889219685676258 0.8067950007271085 3 {[{M(Oxidation (M))|F}D]|MM}N 3 -1 13.244 0.0 0.0 1.6798 0.0 0.0 0.0 409.2649074618884 409.2649074618884 0.7699217471274995 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.2302046884880938 0.0 {[{M(Oxidation (M))|F}D]|MM}N 1.6798 - 88 1 1.172 151493.8 1.0 7710 5464 13158 HBL1_DMSO_200M_050219_1,13176 HBL1_DMSO_200M_050219_1,13176,TNGSVKAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13177 66.657 260.0 268210.0 25 0 21796.0 -1 0 79 597.964559180603 0 597.9636108279228 PEAK CID FTMS 0 0 0 13158 295713.8125 1.0 0 0.0 19 3 {I|L} 1 -1 5.4846 0.0 0.0 0.45938 0.0 0.0 135.31210068366846 942.5070284479124 1077.819129131581 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.45938 - 30 + 1 1.172 61848.4 1.0 7711 5464 13158 HBL1_DMSO_200M_050219_1,13177 HBL1_DMSO_200M_050219_1,13177, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13178 66.662 278.0 432620.0 25 0 20157.0 -1 VPVGCDFNSL 10 152 554.2612689402263 0 554.2606689333916 PEAK CID FTMS 0 0 0 13158 272203.03125 1.0 0 0.0 20 Carbamidomethyl (C) _VPVGC(Carbamidomethyl (C))DFNSL_ ENST00000409663.7_1_4:154523409-154524544:+|nuORF 11.640296217721598 0.3623705791714445 3 PDPE 4 -1 17.167 0.0 0.0 1.5515 0.0 0.0 99.96183899065996 565.348071818519 665.309910809179 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PDPE 1.5515 - 152 + 1 1.172 96938.1 1.0 7712 5464 13158 HBL1_DMSO_200M_050219_1,13178 HBL1_DMSO_200M_050219_1,13178,VPVGCDFNSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13180 66.666 41.0 1908800.0 25 0 169320.0 + 16737 KFIDKQLEL 9 116 567.331783035596 1132.649013137992 2 567.3320190310478 MULTI CID FTMS 0 0 0 13179 1924455.625 0.7367693117116193 1 -0.0665512084960937 1 Unmodified _KFIDKQLEL_ ENSG00000116688|ENST00000235329|MFN2;nc|ENSG00000116688|O95140-2|MFN2 69.33821966488729 0.021354776001734 3 {M(Oxidation (M))|F}{I|L}DQK{I|L}E{I|L} 8 3 62.037 0.0 0.0 5.4772 0.0 0.0 128.09547621894689 0.0 128.09547621894689 0.0 40.873730725343975 0.0 0.0 0 2.3169015600442577 0.0 0.7302046884880937 0.3252574989159953 {M(Oxidation (M))|F}{I|L}DQK{I|L}E{I|L} 5.4772 - 1101 1 1.172 60610.2 1.0 7713 5465 13179 HBL1_DMSO_200M_050219_1,13180 HBL1_DMSO_200M_050219_1,13180,KFIDKQLEL True True KFIDKQLEL 66.665918 567.332019031048 48512686.0 13179.0 ENSG00000116688|ENST00000235329|MFN2;;nc|ENSG00000116688|O95140-2|MFN2 4.279536406199138 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13181 66.667 26.0 1636200.0 25 0 121350.0 + 31164 RLPEAIEEV 9 65 528.290055908094 1054.565558882988 2 528.2907592654228 MULTI CID FTMS 0 0 0 13179 1761082.625 0.0518797873871041 13 -1.0618362426757812 2 Unmodified _RLPEAIEEV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 23.78978130925829 0.2284941198415988 3 A{I|L}EEV 5 4 43.954 0.0 0.0 4.1679 0.0 0.0 495.28270156074376 0.0 495.28270156074376 0.0 31.18944035183194 0.0 0.0 0 0.75 0.0 0.0 0.0 + A{I|L}EEV 4.1679 + + 72 1 1.172 41979.5 1.0 7714 5465 13179 HBL1_DMSO_200M_050219_1,13181 HBL1_DMSO_200M_050219_1,13181,RLPEAIEEV False True RLPEAIEEV 66.667097 528.290759265423 2011549248.0 13179.0 ENST00000460882.5_1_9:37422710-37436776:+|nuORF;;ENST00000493368.5_1_9:37422710-37428742:+|nuORF;;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;;ENSG00000137106|ENST00000318158|GRHPR 5.828128019968669 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13182 66.668 11.0 5823400.0 25 0 794530.0 + 21949 LPPLHVAKL 9 89 329.88326593214674 986.6279683966402 3 329.8831970095634 MULTI CID FTMS 0 0 0 13179 3523454.75 0.8143969831214144 -1 0.0699081420898437 3 Unmodified _LPPLHVAKL_ ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 26.88365393820708 0.1891292719743517 3 {I|L}P{I|L}P[HV]AK{I|L} 9 2 + 47.265 0.0 0.0 4.7905 4.7905 86.823 0.0 0.0 0.0 21.00399774523742 2.975473068031704 2.975473068031704 22.88725489996435 0 0.2887254899964357 1.6989700043360187 0.0 0.0 {I|L}P{I|L}P[HV]AK{I|L};{I|L}{I|L}PP[HV]AK{I|L} 4.7905;2.4708 -;- 149 + 1 1.172 54200.3 1.0 7715 5465 13179 HBL1_DMSO_200M_050219_1,13182 HBL1_DMSO_200M_050219_1,13182,LPPLHVAKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13183 66.669 27.0 1618900.0 25 0 223000.0 + 45883 YYRFGQVY 8 67 548.2661198897222 1094.5176868462445 2 548.2667114138603 MULTI CID FTMS 0 0 0 13179 1421649.625 1.0 0 0.0 4 Unmodified _YYRFGQVY_ ENSG00000134910|ENST00000392708|STT3A;ENST00000526364.1_1_11:125488416-125491330:+|nuORF;nc|ENSG00000134910|P46977-2|STT3A 36.04419817259434 0.3004715606373109 3 YY 2 6 27.167 0.0 0.0 2.4821 0.0 0.0 0.0 765.3715914361936 765.3715914361936 0.920146062458258 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + YY 2.4821 + + 107 + 1 1.172 40369.2 1.0 7716 5465 13179 HBL1_DMSO_200M_050219_1,13183 HBL1_DMSO_200M_050219_1,13183,YYRFGQVY False True YYRFGQVY 66.669454 548.26671141386 10450362.0 13179.0 ENST00000526364.1_1_11:125488416-125491330:+|nuORF;;nc|ENSG00000134910|P46977-2|STT3A;;ENSG00000134910|ENST00000392708|STT3A 5.013264815012614 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13184 66.671 71.0 2045800.0 25 0 189090.0 10283 FRGIQYFL 8 123 348.526046031335 1042.556308694205 3 348.5258056521416 MULTI CID FTMS 0 0 0 13179 1255154.875 0.6808602407764484 -3 0.2024612426757812 5 Unmodified _FRGIQYFL_ ENSG00000196689|ENST00000572705|TRPV1;ENST00000574085.5_1_17:3470111-3495610:-|nuORF;nc|ENSG00000196689|Q8NER1-3|TRPV1 13.90604991867851 0.7054780292895731 3 [PA]A{I|L}[WM]{I|L}E{I|L} 9 7 + 24.292 0.0 0.0 2.3301 2.3301 70.84 0.0 0.0 0.0 9.590285513938214 1.271818570135327 1.271818570135327 3.0102999566398125 0 0.2742275032520141 1.5228787452803376 0.0 0.0 [PA]A{I|L}[WM]{I|L}E{I|L};[PA]A[WP]{M(Oxidation (M))|F}{I|L}E{I|L};[R{M(Oxidation (M))|F}]EHEKVV;[R{M(Oxidation (M))|F}]HEEKVV;[R{M(Oxidation (M))|F}]E[Q{I|L}][HT]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEH[WK]{I|L};[R{M(Oxidation (M))|F}]EH{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AHE[WK]{I|L};[R{M(Oxidation (M))|F}]HE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATH{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V 2.3301;2.0413;1.4102;0.95254;0.75822;0.60632;0.52273;0.08446;0.065081;0.016017 -;-;-;-;-;-;-;-;-;- 500 1 1.172 126742.2 1.0 7717 5465 13179 HBL1_DMSO_200M_050219_1,13184 HBL1_DMSO_200M_050219_1,13184,FRGIQYFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13185 66.672 26.0 1442000.0 25 0 111000.0 + 27392 PIHGELPPK 9 77 494.283846618593 986.553140303986 2 494.2830993533134 MULTI CID FTMS 0 0 0 13179 1191527.625 0.2065565984462068 -9 0.7480392456054688 6 Unmodified _PIHGELPPK_ REV__ENSG00000175414|ENST00000310389|ARL10 8.593279151180031 0.6146971463335029 3 [{I|L}P][HV]AK[WH] 8 -1 + 12.062 0.0 0.0 1.2226 1.2226 78.67 0.0 0.0 0.0 0.0718375675381839 -12.730012720637374 -12.730012720637374 12.061537610898371 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P][HV]AK[WH] 1.2226 - 61 1 1.172 37099.8 1.0 7718 5465 13179 HBL1_DMSO_200M_050219_1,13185 HBL1_DMSO_200M_050219_1,13185,PIHGELPPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13186 66.676 182.0 844610.0 25 0 102100.0 + 36624 TASCMEYPCPR 11 115 629.2562475217233 1256.4979421102464 2 629.2567016482353 MULTI CID FTMS 0 0 0 13179 1101386.875 0.4294224036088443 -3 0.2024612426757812 7 Unmodified _TASCMEYPCPR_ REV__ENSG00000171815|ENST00000306549|PCDHB1 14.40537977576856 0.7354982482299568 3 TAVEAE 6 -1 65.449 0.0 0.0 5.2088 0.0 0.0 0.0 653.2192476861936 653.2192476861936 54.18998687646313 0.0 0.0 0.0 0 0.9698565171985376 2.0 0.0 0.0 TAVEAE 5.2088 - 366 + 1 1.172 118083.0 1.0 7719 5465 13179 HBL1_DMSO_200M_050219_1,13186 HBL1_DMSO_200M_050219_1,13186,TASCMEYPCPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13187 66.681 258.0 677820.0 25 0 29218.0 + 11929 GMLAAGGAGL 10 92 817.4233796269 816.4161031602999 1 817.4230224490166 MULTI CID FTMS 0 0 0 13179 656687.875 0.7749742824780015 -3 0.2024612426757812 8 Unmodified _GMLAAGGAGL_ ENSG00000179091|ENST00000318911|CYC1;ENST00000533444.1_1_8:145150729-145152236:+|nuORF 110.56003615220408 0.0023188484892351 3 {[MG]|[TS]}{I|L}AAGGAG{I|L} 10 0 + 87.349 0.0 0.0 10.699 10.699 90.231 0.0 0.0 0.0 16.121506059964545 62.19904731848281 16.121506059964545 4.503187623076954 0 3.052887198244136 0.0 1.1237125054200234 0.0 + + {[MG]|[TS]}{I|L}AAGGAG{I|L};{[MG]|[TS]}{I|L}AANAG{I|L};{[MG]|[TS]}{I|L}AQGAG{I|L};{[MG]|[TS]}A{I|L}AGGAG{I|L};{[MG]|[TS]}{I|L}AGAGAG{I|L};{[MG]|[TS]}{I|L}AAGQG{I|L};{[MG]|[TS]}A{I|L}ANAG{I|L};{[MG]|[TS]}{I|L}AGQAG{I|L};{[MG]|[TS]}{I|L}AAGGQ{I|L};{[MG]|[TS]}{I|L}ANAAG{I|L} 10.699;10.148;9.7475;9.4414;9.4414;9.1351;8.8898;8.8898;8.7663;8.6742 +;-;-;-;-;-;-;-;-;- + 4729 1 1.172 122093.1 1.0 7720 5465 13179 HBL1_DMSO_200M_050219_1,13187 HBL1_DMSO_200M_050219_1,13187,GMLAAGGAGL True True GMLAAGGAGL 66.680654 817.423022449017 6196558.0 13179.0 ENSG00000179091|ENST00000318911|CYC1;;ENST00000533444.1_1_8:145150729-145152236:+|nuORF 7.319115161895752 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13188 66.686 264.0 698880.0 25 0 100920.0 + -1 YVLFQIVCGRF 11 138 467.91715868997824 1400.7296466701348 3 467.9174072146416 MULTI CID FTMS 0 0 0 13179 615575.6875 0.4179472790895301 1 -0.0665512084960937 9 Carbamidomethyl (C) _YVLFQIVC(Carbamidomethyl (C))GRF_ REV__nc|ENSG00000181282|Q8NH89|OR5AK3P 9.243775137331635 0.8315352019864206 3 YV{I|L}D{I|L}EKG{[QS]|[NT]}H{I|L} 12 -1 + 92.602 0.0 0.0 6.611 6.611 80.719 0.0 0.0 0.0 59.43131321983615 7.744331616530729 7.744331616530729 1.7731749024395924 0 0.3807196863200844 2.0 1.3703715150305282 0.0 YV{I|L}D{I|L}EKG{[QS]|[NT]}H{I|L};YV{I|L}{I|L}DEKG{[QS]|[NT]}H{I|L};YV{I|L}D{I|L}EKYYPV;YV{I|L}{I|L}DEKYYPV;YV{I|L}D{I|L}EVV{[DS]|[MA]|[CV]|TT}H{I|L};YV{I|L}{I|L}DEVV{[DS]|[MA]|[CV]|TT}H{I|L};YV{I|L}D{I|L}EVV[HA]M{I|L};YV{I|L}D{I|L}EVV{I|L}[HC]V;YV{I|L}{I|L}DEVV[HA]M{I|L};YV{I|L}{I|L}DEVV{I|L}[HC]V 6.611;6.4844;5.6251;5.4985;5.3808;5.2542;5.0271;4.9734;4.9005;4.8468 -;-;-;-;-;-;-;-;-;- 5444 + 1 1.172 148719.2 1.0 7721 5465 13179 HBL1_DMSO_200M_050219_1,13188 HBL1_DMSO_200M_050219_1,13188,YVLFQIVCGRF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13189 66.69 248.0 320720.0 25 0 41591.0 + 43995 YIDKDLEYV 9 117 579.2902595366455 1156.565966140091 2 579.2911865115166 MULTI CID FTMS 0 0 0 13179 500097.875 0.7149524301212697 1 -0.0665512084960937 10 Unmodified _YIDKDLEYV_ ENSG00000113360|ENST00000344624|DROSHA;ENST00000509067.1_1_5:31409161-31409425:-|nuORF;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA 32.78568957990786 0.1150597335874693 3 {NN|[MP]|[D{I|L}]|[EV]}WWY{I|L}YV 8 5 + 48.593 0.0 0.0 4.2015 4.2015 77.848 0.0 0.0 0.0 10.792585432446693 9.419628234359578 9.419628234359578 5.2827377716704405 0 0.5924778212679485 1.154901959985743 0.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}WWY{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}EKDY{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}WW{I|L}YYV;{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}YE{I|L}YV;{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}EY{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}EKD{I|L}YYV;[Y{I|L}]DWW{I|L}YV;{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}Y{I|L}EYV;{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}E{I|L}YYV;{NN|[MP]|[D{I|L}]|[EV]}YWW{I|L}YV 4.2015;3.7447;3.4868;3.2684;3.1614;3.03;2.8532;2.7059;2.4467;2.2758 -;-;-;-;-;-;-;-;-;- 666 1 1.172 65374.4 1.0 7722 5465 13179 HBL1_DMSO_200M_050219_1,13189 HBL1_DMSO_200M_050219_1,13189,YIDKDLEYV True True YIDKDLEYV 66.690158 579.291186511517 12120182.0 13179.0 ENST00000509067.1_1_5:31409161-31409425:-|nuORF;;nc|ENSG00000113360|Q9NRR4-2|DROSHA;;ENSG00000113360|ENST00000344624|DROSHA;;nc|ENSG00000113360|Q9NRR4-4|DROSHA 4.623150030771892 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13190 66.692 58.0 1057300.0 25 0 97703.0 11050 GDHSKVRI 8 93 456.2569667334189 0 456.2564269900322 PEAK CID FTMS 0 0 0 13179 511721.5 0.2492340982194111 -12 0.9841079711914062 11 Unmodified _GDHSKVRI_ ENSG00000118557|ENST00000237353|PMFBP1;nc|ENSG00000118557|Q8TBY8-1|PMFBP1;nc|ENSG00000118557|Q8TBY8-3|PMFBP1;nc|ENSG00000118557|Q8TBY8-4|PMFBP1 9.347437153973935 0.5488964601725408 3 {M(Oxidation (M))|F} 1 8 7.7866 0.0 0.0 0.8552 0.0 0.0 308.17956959789404 452.2492593551361 760.4288289530301 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.8552 - 58 + 1 1.172 54686.1 1.0 7723 5465 13179 HBL1_DMSO_200M_050219_1,13190 HBL1_DMSO_200M_050219_1,13190,GDHSKVRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13191 66.697 289.0 697540.0 25 0 22574.0 -1 0 140 910.4224863885926 1818.830419843985 2 911.4330932497978 MULTI CID FTMS 0 0 0 13179 523439.75 0.1518092760198711 10 -0.7594833374023438 12 3 [VS]DY{I|L}SERDAD 11 -1 38.421 0.0 0.0 2.1124 0.0 0.0 0.0 565.2466084965987 565.2466084965987 11.697178696340988 0.0 0.0 0.0 0 0.0 0.0 1.9718487496163564 0.0 [VS]DY{I|L}SERDAD 2.1124 - 10198 1 1.172 133882.0 1.0 7724 5465 13179 HBL1_DMSO_200M_050219_1,13191 HBL1_DMSO_200M_050219_1,13191, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13192 66.702 253.0 460960.0 25 0 22799.0 + 37000 TFPAYPGSSSM 11 161 572.7530876818781 1143.4916224305562 2 572.7536498904228 MULTI CID FTMS 0 0 0 13179 466295.75 0.683994978539242 -9 0.7480392456054688 13 Unmodified _TFPAYPGSSSM_ ENSG00000004975|ENST00000005340|DVL2;ENST00000571745.1_1_17:7130492-7131139:-|nuORF;ENST00000576840.5_1_17:7130280-7131353:-|nuORF 32.78568957990786 0.3235288296534633 3 S{I|L}M{M(Oxidation (M))|F}TM 6 10 38.421 0.0 0.0 3.36 0.0 0.0 415.1783422565312 0.0 415.1783422565312 0.0 14.61372217122786 0.0 0.0 0 0.2614393726401688 0.0 0.7926740567922439 0.0 S{I|L}M{M(Oxidation (M))|F}TM 3.36 - 1995 + 1 1.172 91556.8 1.0 7725 5465 13179 HBL1_DMSO_200M_050219_1,13192 HBL1_DMSO_200M_050219_1,13192,TFPAYPGSSSM False True TFPAYPGSSSM 66.701651 572.753649890423 8661086.0 13179.0 ENST00000576840.5_1_17:7130280-7131353:-|nuORF;;ENSG00000004975|ENST00000005340|DVL2;;ENST00000571745.1_1_17:7130492-7131139:-|nuORF 7.101480325063069 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13193 66.709 400.0 579160.0 25 0 25823.0 + + 27280 MAFLPHHI 8 211 322.50563433925555 964.4950736179668 3 322.5047180056572 MULTI CID FTMS 0 0 0 13179 391437.59375 0.3658002543020798 1 -0.0665512084960937 14 Unmodified _PHHIIMFA_ ENSG00000178974|ENST00000313833|FBXO34 17.086550045450526 0.6584923310065985 3 [WY]{I|L}PHH{I|L} 7 -1 + 32.184 0.0 0.0 3.3369 3.3369 80.961 0.0 0.0 0.0 19.25205716106128 9.6479633912994 9.6479633912994 11.422815857436532 0 0.0 0.0 0.0 0.0 [WY]{I|L}PHH{I|L};[WY]{I|L}{I|L}EE{I|L};HHP{I|L}{I|L}[WY];HH{I|L}P{I|L}[WY];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{I|L}{I|L}[WY];{[DS]|[MA]|[CV]|TT}[KG]P{I|L}[WY] 3.3369;2.1525;1.2203;1.1382;0.85065;0.5733 -;-;-;-;-;- 254 + 1 1.172 187552.6 1.0 7726 5465 13179 HBL1_DMSO_200M_050219_1,13193 HBL1_DMSO_200M_050219_1,13193,PHHIIMFA False False MAFLPHHI 66.708795 322.504718005657 16381190.0 13179.0 ENSG00000178974|ENST00000313833|FBXO34 6.368423144022624 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13194 66.714 286.0 356270.0 25 0 30007.0 -1 0 94 599.6358824264353 1795.8858178795058 3 599.6355468630791 MULTI CID FTMS 0 0 0 13179 354425.28125 0.67530503797784 -4 0.3228683471679687 15 3 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 6 -1 32.836 0.0 0.0 1.8284 0.0 0.0 1082.4960761805855 0.0 1082.4960761805855 0.0 11.598878259206842 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 1.8284 - 353 1 1.172 83738.2 1.0 7727 5465 13179 HBL1_DMSO_200M_050219_1,13194 HBL1_DMSO_200M_050219_1,13194, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13195 66.721 409.0 273170.0 25 0 31290.0 22434 LPTLKAAV 8 123 406.7646455914878 811.5147382497756 2 406.7643920779228 MULTI CID FTMS 0 0 0 13179 268250.21875 1.0 0 0.0 16 Unmodified _LPTLKAAV_ ENSG00000185442|ENST00000327355|FAM174B 6.354104778181461 0.7857632046190106 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M 3 7 25.163 0.0 0.0 3.1007 0.0 0.0 0.0 402.3300513203413 402.3300513203413 9.619570697197696 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.4247425010840047 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M 3.1007 - 80 1 1.172 90006.6 1.0 7728 5465 13179 HBL1_DMSO_200M_050219_1,13195 HBL1_DMSO_200M_050219_1,13195,LPTLKAAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13196 66.728 313.0 311710.0 25 0 23046.0 78 AAGMEAELRL 10 151 530.775573055867 1059.5365931785338 2 530.7783691287041 MULTI CID FTMS 0 0 0 13179 250414.25 0.2267674761589052 10 -0.7594833374023438 17 Unmodified _AAGMEAELRL_ ENST00000433430.5_1_2:233200970-233201285:+|nuORF 20.41453444215458 0.5050059513928961 3 KDS{I|L}{[CP]|[EA]}ER{I|L} 9 5 + 24.766 0.0 0.0 2.3374 2.3374 66.475 0.0 0.0 0.0 -2.4550042192223422 1.348200093054718 -2.4550042192223422 0.4216561218376569 0 0.3252574989159953 0.0 0.2742275032520141 0.0 KDS{I|L}{[CP]|[EA]}ER{I|L};[QA]{I|L}ECVER{I|L};KD{[CT]|[{M(Oxidation (M))|F}G]}PVER{I|L};K[PS]ECVER{I|L};KD[TP]CVER{I|L};KD[WD]VER{I|L};KDS{[CP]|[EA]}{I|L}ER{I|L};{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}ST{I|L}S[QP];KDS{I|L}{[CP]|[EA]}[W{I|L}]V;K[VS]E{[CP]|[EA]}ER{I|L} 2.3374;2.2976;2.2717;2.2453;2.1538;2.1106;2.1081;2.0187;1.7042;1.6294 -;-;-;-;-;-;-;-;-;- 1207 + 1 1.172 81310.0 1.0 7729 5465 13179 HBL1_DMSO_200M_050219_1,13196 HBL1_DMSO_200M_050219_1,13196,AAGMEAELRL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13198 66.732 17.0 3212700.0 25 0 388160.0 + 32360 RYPTSIASL 9 73 504.27971494636216 1006.5448769595243 2 504.2801696658134 MULTI CID FTMS 0 0 0 13197 3499905.75 0.067254543896993 -8 0.64459228515625 1 Unmodified _RYPTSIASL_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 45.69961567697781 0.0497987121815769 3 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 5 + 70.678 0.0 0.0 7.0218 7.0218 85.076 0.0 0.0 0.0 3.802112417116064 16.478174818886373 3.802112417116064 3.802112417116064 0 1.25 1.5228787452803376 0.805462187404089 0.0 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L};[YR][PS]T{I|L}AS{I|L};[YR][PS]VVSS{I|L} 7.0218;6.6441;5.3061;2.5231 -;-;-;- 276 1 1.174 47845.1 1.0 7730 5466 13197 HBL1_DMSO_200M_050219_1,13198 HBL1_DMSO_200M_050219_1,13198,RYPTSIASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13199 66.734 44.0 711600.0 25 0 75001.0 + 12617 GVITKGTVIEV 11 52 558.3371948471738 1114.6598367611475 2 558.3375732302666 MULTI CID FTMS 0 0 0 13197 1342339.875 0.5671927328978914 1 -0.13336181640625 2 Unmodified _GVITKGTVIEV_ ENSG00000164346|ENST00000610426|NSA2 19.361941925380144 0.6323962752489956 3 [VG]{I|L}T[KT]R{I|L}{NN|[MP]|[D{I|L}]|[EV]} 10 2 + 47.14 0.0 0.0 4.2291 4.2291 78.799 0.0 0.0 0.0 6.3033376849500655 7.269987279362624 6.3033376849500655 6.3033376849500655 0 0.5 1.6989700043360187 0.8494850021680094 0.0 [VG]{I|L}T[KT]R{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}K[KT]R{I|L}{NN|[MP]|[D{I|L}]|[EV]};[VG]{I|L}T[KT][VG]{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}K[KT][VG]{I|L}{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]{I|L}R[KT][VG]PV;[{I|L}T][VG][KT]R{I|L}{NN|[MP]|[D{I|L}]|[EV]} 4.2291;3.6636;3.4069;2.8375;2.3433;1.4713 -;-;-;-;-;- 63 1 1.174 32252.6 1.0 7731 5466 13197 HBL1_DMSO_200M_050219_1,13199 HBL1_DMSO_200M_050219_1,13199,GVITKGTVIEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13200 66.738 257.0 497470.0 25 0 73827.0 + 44810 YPNKYESII 9 126 563.7927518217267 1125.570950710253 2 563.7934448122978 MULTI CID FTMS 0 0 0 13197 698668.5625 0.1781063747208598 5 -0.4302444458007812 3 Unmodified _YPNKYESII_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 57.72198328787511 0.0273433238377839 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NKESY{I|L}{I|L} 9 2 + 90.59 0.0 0.0 8.0484 8.0484 92.279 0.0 0.0 0.0 10.618258938580098 13.46787486224656 10.618258938580098 9.018637558036673 0 1.110924374808178 2.0 1.3778623208748888 0.6139829889124311 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NKESY{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NKEYS{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGKESY{I|L}{I|L};[NP]KYESY{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NKES{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NKYES{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGKEYS{I|L}{I|L};{[TV]|[{I|L}S]}[KC]AESY{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHPSY{I|L}{I|L};[KG]GPYESY{I|L}{I|L} 8.0484;7.2472;7.2303;7.105;7.0869;6.747;6.4291;6.394;6.3719;6.3133 -;-;-;-;-;+;-;-;-;- + 2688 1 1.174 97662.9 1.0 7732 5466 13197 HBL1_DMSO_200M_050219_1,13200 HBL1_DMSO_200M_050219_1,13200,YPNKYESII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13201 66.744 313.0 341720.0 25 0 49020.0 + 16739 KFIDKQLEL 9 137 378.5570316525335 1132.6492655578006 3 378.5568115115166 MULTI CID FTMS 0 0 0 13197 590078.625 0.3400439606731051 2 -0.16070556640625 4 Unmodified _KFIDKQLEL_ ENSG00000116688|ENST00000235329|MFN2;nc|ENSG00000116688|O95140-2|MFN2 39.94969957227396 0.0757326808254658 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}DKQ 6 3 37.131 0.0 0.0 3.2783 0.0 0.0 0.0 370.2002954328405 370.2002954328405 10.220809985906186 0.0 0.0 0.0 0 0.5866968715561641 0.0 0.3494850021680094 0.7134679910804405 + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}DKQ 3.2783 + + 315 1 1.174 89191.3 1.0 7733 5466 13197 HBL1_DMSO_200M_050219_1,13201 HBL1_DMSO_200M_050219_1,13201,KFIDKQLEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13202 66.75 333.0 992720.0 25 0 61834.0 + 27895 PLSPLFLPL 9 227 498.8081050507611 995.6016571683224 2 498.8077880740166 MULTI CID FTMS 0 0 0 13197 436840.59375 0.2684213988721265 -8 0.64459228515625 5 Unmodified _PLSPLFLPL_ REV__ENST00000314940.6_1_5:137089877-137089988:-|nuORF 57.47134341890925 0.0274820932774257 3 {I|L}PSP{I|L}[KQ]T{I|L} 9 -1 + 58.747 0.0 0.0 5.9006 5.9006 89.134 0.0 0.0 0.0 25.607880415031783 4.132587703203967 4.132587703203967 12.498242956091588 0 1.201163485412895 1.3979400086720375 1.3671302707394362 0.3054621874040891 {I|L}PSP{I|L}[KQ]T{I|L};[{I|L}P]SKQT{I|L}P{I|L};[{I|L}P]KQST{I|L}P{I|L};[PS]{I|L}KQT{I|L}P{I|L};[{I|L}P]KQTS{I|L}P{I|L};[{I|L}P]KSQT{I|L}P{I|L};[{I|L}P]KQT{I|L}SP{I|L};[{I|L}P]SKQTP{I|L}{I|L};[{I|L}P]KQSTP{I|L}{I|L};[PS]{I|L}KQTP{I|L}{I|L} 5.9006;4.6453;4.5249;4.4708;4.2738;4.2226;4.0426;4.0405;3.9202;3.8661 -;-;-;-;-;-;-;-;-;- 4279 + 1 1.174 248149.8 1.0 7734 5466 13197 HBL1_DMSO_200M_050219_1,13202 HBL1_DMSO_200M_050219_1,13202,PLSPLFLPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13203 66.756 328.0 801460.0 25 0 145580.0 + 4506 DAYKIRIRI 9 125 574.3506972423263 1146.6868415514523 2 574.3508178591728 MULTI CID FTMS 0 0 0 13197 400701.75 0.1729276047376432 -2 0.1364593505859375 6 Unmodified _DAYKIRIRI_ ENSG00000143622|ENST00000368323|RIT1;nc|ENSG00000143622|Q92963-2|RIT1;nc|ENSG00000143622|Q92963-3|RIT1 45.69961567697781 0.0497987121815769 3 DA[YK]{I|L}R{I|L}{I|L}R 9 2 + 57.726 0.0 0.0 5.0341 5.0341 75.072 0.0 0.0 0.0 24.61040348368065 1.5970084286751174 1.5970084286751174 1.5970084286751174 0 1.0387254899964358 1.2218487496163564 0.0 1.589136830878453 DA[YK]{I|L}R{I|L}{I|L}R;DA[YK]{I|L}R{I|L}R{I|L};{I|L}{[DS]|[MA]|[CV]|TT}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}{I|L}R;W[YK]{I|L}[VG]{I|L}{I|L}R;{I|L}{[DS]|[MA]|[CV]|TT}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}R{I|L};W[YK]{I|L}[VG]{I|L}R{I|L} 5.0341;4.8949;2.8879;2.8584;2.7486;2.7191 -;+;-;-;-;- + 253 + 1 1.174 202204.4 1.0 7735 5466 13197 HBL1_DMSO_200M_050219_1,13203 HBL1_DMSO_200M_050219_1,13203,DAYKIRIRI True True DAYKIRIRI 66.75618 574.350817859173 14227723.0 13197.0 nc|ENSG00000143622|Q92963-3|RIT1;;nc|ENSG00000143622|Q92963-2|RIT1;;ENSG00000143622|ENST00000368323|RIT1 4.670429706573486 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13204 66.763 356.0 526510.0 25 0 24590.0 -1 0 164 917.431509586288 1832.848466239376 2 917.4377929568292 MULTI CID FTMS 0 0 0 13197 352208.96875 0.092463799880564 6 -0.4733505249023437 7 3 [MN]PNNNQC{I|L}A{I|L}HH{I|L}{[QS]|[NT]} 16 -1 + 60.132 0.0 0.0 3.2808 3.2808 73.441 0.0 0.0 0.0 20.43018659714521 4.841731688660509 4.841731688660509 3.593370454590016 0 0.9802046884880936 1.5228787452803376 0.7302046884880937 0.5796896906561032 [MN]PNNNQC{I|L}A{I|L}HH{I|L}{[QS]|[NT]};[MN]PH[VS]{M(Oxidation (M))|F}C{I|L}A{I|L}HH{I|L}{[QS]|[NT]};[MN]PNNNQ[R{M(Oxidation (M))|F}]PHH{I|L}{[QS]|[NT]};[MN]PN{I|L}NEC{I|L}A{I|L}HH{I|L}{[QS]|[NT]};[MN]PNNN[H{I|L}]VGQ[HM]{I|L}{[QS]|[NT]};[MN]PGGNNQC{I|L}A{I|L}HH{I|L}{[QS]|[NT]};[MN]PNGGNQC{I|L}A{I|L}HH{I|L}{[QS]|[NT]};[MN]PNNN[AG]C{I|L}A{I|L}HH{I|L}{[QS]|[NT]};[MN]PNNGGQC{I|L}A{I|L}HH{I|L}{[QS]|[NT]};[MN]P[EP]P{M(Oxidation (M))|F}C{I|L}A{I|L}HH{I|L}{[QS]|[NT]} 3.2808;3.0847;2.9865;2.842;2.8207;2.789;2.789;2.789;2.789;2.763 -;-;-;-;-;-;-;-;-;- 22482 + 1 1.174 124041.3 1.0 7736 5466 13197 HBL1_DMSO_200M_050219_1,13204 HBL1_DMSO_200M_050219_1,13204, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13205 66.77 411.0 439830.0 25 0 37963.0 + 29895 QSARGSSL 8 204 403.2127852262337 0 403.2132140994072 PEAK CID FTMS 0 0 0 13197 350733.375 1.0 0 0.0 8 Unmodified _QSARGSSL_ REV__ENST00000454305.1_1_1:77533610-77544072:+|nuORF 10.183394434864962 0.5394990767616434 3 Q 1 -1 2.4743 0.0 0.0 0.30759 0.0 0.0 192.0774719689445 481.24277673892817 673.3202487078727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.30759 + + 4 + 1 1.174 143851.6 1.0 7737 5466 13197 HBL1_DMSO_200M_050219_1,13205 HBL1_DMSO_200M_050219_1,13205,QSARGSSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13206 66.778 445.0 551620.0 25 0 85190.0 191 AAPHGPGA 8 207 339.1713121519176 676.3280713706353 2 339.1713134646416 MULTI CID FTMS 0 0 0 13197 301913.1875 0.8291466010962747 1 -0.13336181640625 9 Unmodified _AAPHGPGA_ ENSG00000174963|ENST00000383075|ZIC4;ENST00000493664.5_1_3:147108719-147114575:-|nuORF;nc|ENSG00000174963|Q8N9L1-2|ZIC4;nc|ENSG00000174963|Q8N9L1-3|ZIC4;nc|ENSG00000174963|Q8N9L1-5|ZIC4 0.7936320650641473 0.8195151834710337 3 {I|L}{I|L}P 3 7 45.049 0.0 0.0 6.6609 0.0 0.0 0.0 350.0852217704803 350.0852217704803 34.77181972423671 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}P 6.6609 - 67 + 1 1.174 193773.4 1.0 7738 5466 13197 HBL1_DMSO_200M_050219_1,13206 HBL1_DMSO_200M_050219_1,13206,AAPHGPGA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13207 66.78 113.0 364870.0 25 0 84329.0 + 5502 SQLDISEPYKV 11 60 639.3359863162041 0 639.3359863162041 PEAK CID FTMS 0 0 0 -1 0 10 Unmodified _DLTNVIQKMIC_ ENSG00000140968|ENST00000268638|IRF8 8.745405648335112 0.4618489994582195 3 {I|L}D{I|L} 3 9 16.198 0.0 0.0 1.2688 0.0 0.0 214.0991577674712 718.3417452447874 932.4409030122586 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D{I|L} 1.2688 - 24 + 1 1.174 39909.7 1.0 7739 5466 13197 HBL1_DMSO_200M_050219_1,13207 HBL1_DMSO_200M_050219_1,13207,DLTNVIQKMIC False False SQLDISEPYKV 66.780242 639.335986316204 2287256.25 13197.0 ENSG00000140968|ENST00000268638|IRF8 8.296483675638834 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13208 66.787 373.0 860210.0 25 0 46980.0 + 18529 KYQPRIAVF 9 216 561.3269282027389 1120.6393034722778 2 561.3271972537041 MULTI CID FTMS 0 0 0 13197 253536.234375 0.1608551157900113 -2 0.1364593505859375 11 Unmodified _KYQPRIAVF_ ENSG00000139372|ENST00000392872|TDG 53.40400417844725 0.0329064971918313 3 KYQ{M(Oxidation (M))|F} 4 5 44.262 0.0 0.0 3.9497 0.0 0.0 0.0 551.3328951471311 551.3328951471311 11.905892458001029 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.3054621874040891 KYQ{M(Oxidation (M))|F} 3.9497 - 1491 + 1 1.174 240546.0 1.0 7740 5466 13197 HBL1_DMSO_200M_050219_1,13208 HBL1_DMSO_200M_050219_1,13208,KYQPRIAVF True True KYQPRIAVF 66.786953 561.327197253704 14934116.0 13197.0 ENSG00000139372|ENST00000392872|TDG 4.057453950246175 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13209 66.796 470.0 787340.0 25 0 113330.0 + 11639 GLAPPQHLIRV 11 189 400.9120811700526 1199.714414110358 3 400.9116699099541 MULTI CID FTMS 0 0 0 13197 230794.203125 0.5655366599571824 1 -0.13336181640625 12 Unmodified _GLAPPQHLIRV_ ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;nc|ENSG00000141510|P04637-7|TP53;nc|ENSG00000141510|P04637-8|TP53;nc|ENSG00000141510|P04637-9|TP53 23.96415052054722 0.529517076964577 3 {[VA]|[{I|L}G]}APPQH{I|L}VR{I|L} 11 2 + 58.308 0.0 0.0 4.8601 4.8601 55.171 0.0 0.0 0.0 45.9587358533184 0.1313872970995504 0.1313872970995504 0.0 0 0.4978499570595206 1.5228787452803376 0.0 0.7614393726401688 {[VA]|[{I|L}G]}APPQH{I|L}VR{I|L};{[VA]|[{I|L}G]}APPQHV{I|L}R{I|L};{[VA]|[{I|L}G]}APPQH{I|L}{I|L}RV;{[VA]|[{I|L}G]}APVQAY{I|L}R{I|L};{[VA]|[{I|L}G]}APP[AG]H{I|L}VR{I|L};{[VA]|[{I|L}G]}APP[AG]HV{I|L}R{I|L};{[VA]|[{I|L}G]}APP[AG]H{I|L}{I|L}RV;{[VA]|[{I|L}G]}AVPQAY{I|L}R{I|L};{[VA]|[{I|L}G]}APV[AG]AY{I|L}R{I|L};{[VA]|[{I|L}G]}APVQ[{M(Oxidation (M))|F}T]VR{I|L} 4.8601;4.8601;4.7736;4.5651;4.0992;4.0992;4.0128;3.9969;3.8042;3.4817 -;-;+;-;-;-;-;-;-;- + 477 + 1 1.174 284662.8 1.0 7741 5466 13197 HBL1_DMSO_200M_050219_1,13209 HBL1_DMSO_200M_050219_1,13209,GLAPPQHLIRV False True GLAPPQHLIRV 66.796445 400.911669909954 3165064.0 13197.0 nc|ENSG00000141510|P04637-3|TP53;;nc|ENSG00000141510|P04637-8|TP53;;nc|ENSG00000141510|P04637-4|TP53;;ENSG00000141510|ENST00000269305|TP53;;nc|ENSG00000141510|P04637-7|TP53;;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;;nc|ENSG00000141510|P04637-9|TP53;;nc|ENSG00000141510|P04637-2|TP53;;nc|ENSG00000141510|P04637-6|TP53;;nc|ENSG00000141510|P04637-5|TP53 7.017316500345866 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13210 66.809 750.0 353680.0 25 0 32591.0 + 21574 LPKLARVI 8 202 303.8797575367842 0 303.8798705935478 PEAK CID FTMS 0 0 0 13197 218827.796875 0.6338795432439565 1 -0.13336181640625 13 Unmodified _LPKLARVI_ ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL 22.736283301280096 0.3662555986329114 3 P 1 7 3.0989 0.0 0.0 0.51159 0.0 0.0 380.59667525247625 125.07250391177968 505.6691791642559 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.51159 + + 17 + 1 1.174 214520.9 1.0 7742 5466 13197 HBL1_DMSO_200M_050219_1,13210 HBL1_DMSO_200M_050219_1,13210,LPKLARVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13211 66.811 80.0 880470.0 25 0 72108.0 + 5866 DPYEVSYRI 9 83 571.279252526639 1140.5439521200778 2 571.2809326052666 MULTI CID FTMS 0 0 0 13197 208923.390625 0.0608426050402119 -2 0.1364593505859375 14 Unmodified _DPYEVSYRI_ ENSG00000133639|ENST00000256015|BTG1;ENSG00000159388|ENST00000290551|BTG2 70.33199760932243 0.0209706178985989 3 DPYEVS 6 3 83.493 0.0 0.0 7.3204 0.0 0.0 0.0 447.2363680475219 447.2363680475219 61.096981436199016 0.0 0.0 0.0 0 1.610924374808178 1.6989700043360187 0.7742275032520141 0.0 + DPYEVS 7.3204 + + 274 + 1 1.174 59244.7 1.0 7743 5466 13197 HBL1_DMSO_200M_050219_1,13211 HBL1_DMSO_200M_050219_1,13211,DPYEVSYRI True True DPYEVSYRI 66.81124 571.280932605267 34389436.0 13197.0 ENSG00000159388|ENST00000290551|BTG2;;ENSG00000133639|ENST00000256015|BTG1 4.477144440015157 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13212 66.82 500.0 299560.0 25 0 38996.0 + 8838 EYVGGASG 8 126 739.3252534895888 738.3179770229888 1 739.3263427615166 MULTI CID FTMS 0 0 0 13197 166510.265625 0.6973012519502424 -2 0.1364593505859375 15 Unmodified _EYVGGASG_ REV__ENSG00000074695|ENST00000251047|LMAN1 5.230669730166228 0.792582437072536 3 [Y{I|L}]DP[MT] 6 -1 + 16.321 0.0 0.0 2.2106 2.2106 68.101 0.0 0.0 0.0 1.76091259055681 0.4698372174895162 0.4698372174895162 1.426675035687314 0 0.0 1.5228787452803376 0.0 0.0 [Y{I|L}]DP[MT];[Y{I|L}]E[WE];[YE]VP[MT];[YE]{I|L}[WE];{NN|[MP]|[D{I|L}]|[EV]}YP[MT] 2.2106;2.0174;1.9721;1.7789;1.6096 -;-;-;-;- 286 1 1.174 105251.4 1.0 7744 5466 13197 HBL1_DMSO_200M_050219_1,13212 HBL1_DMSO_200M_050219_1,13212,EYVGGASG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13213 66.83 476.0 333530.0 25 0 33409.0 + 32076 RVLPPSALQSV 11 178 583.8481663208781 0 583.8490478396416 PEAK CID FTMS 0 0 0 13197 161519.671875 0.4016299075268074 14 -1.147613525390625 16 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 42.83518252547288 0.1053700868953099 3 Q{I|L}A[PS]P 6 8 29.359 0.0 0.0 2.5186 0.0 0.0 204.1083065638515 365.2310526405578 569.3393592044093 0.0 0.0 0.0 0.0 0 1.066901560044258 0.0 0.805462187404089 0.0 Q{I|L}A[PS]P 2.5186 - 401 + 1 1.174 120162.0 1.0 7745 5466 13197 HBL1_DMSO_200M_050219_1,13213 HBL1_DMSO_200M_050219_1,13213,RVLPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13214 66.839 524.0 359300.0 25 0 19710.0 + -1 VTYYRLEEV 9 214 586.2603658295932 1755.7592680889793 3 586.2653076052666 MULTI CID FTMS 0 0 0 13197 132799.609375 0.3597003024738356 -11 0.9061813354492188 17 Carbamidomethyl (C) _WRC(Carbamidomethyl (C))FQWWRMDW_ ENSG00000103018|ENST00000307892|CYB5B;ENST00000514123.5_1_16:69458586-69482095:+|nuORF 0.0 0.8751479354844584 3 {NN|[MP]|[D{I|L}]|[EV]}PTV[MT]NVT 10 -1 45.881 0.0 0.0 2.6132 0.0 0.0 0.0 681.2099876479857 681.2099876479857 24.4812969097282 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.110924374808178 0.0669015600442578 {NN|[MP]|[D{I|L}]|[EV]}PTV[MT]NVT 2.6132 - 15741 1 1.174 142023.3 1.0 7746 5466 13197 HBL1_DMSO_200M_050219_1,13214 HBL1_DMSO_200M_050219_1,13214,WRCFQWWRMDW False False VTYYRLEEV 66.838942 586.265307605267 1205393.625 13197.0 ENSG00000103018|ENST00000307892|CYB5B;;ENST00000514123.5_1_16:69458586-69482095:+|nuORF 4.4159486293792725 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13215 66.85 654.0 444410.0 25 0 46409.0 -1 0 230 334.7260961069156 667.4376392806312 2 334.7254211306572 MULTI CID FTMS 0 0 0 13197 133328.0625 0.5359884739497105 -1 0.0665512084960937 18 3 AV{I|L}{I|L}PR 6 -1 + 71.133 0.0 0.0 10.658 10.658 91.679 0.0 0.0 0.0 34.69273760456403 5.947607525864626 5.947607525864626 5.947607525864626 0 0.4247425010840047 2.0 0.0 0.75 AV{I|L}{I|L}PR;AV{I|L}{I|L}RP;AV{I|L}[RP]{I|L} 10.658;9.7665;7.8269 -;-;- 163 + 1 1.174 227793.7 1.0 7747 5466 13197 HBL1_DMSO_200M_050219_1,13215 HBL1_DMSO_200M_050219_1,13215, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13216 66.862 656.0 477210.0 25 0 36838.0 -1 0 270 360.71825121746286 0 360.5435363650322 PEAK CID FTMS 0 0 0 13197 27102.037109375 0.2365318794934474 -1 0.0665512084960937 19 3 T 1 -1 5.4846 0.0 0.0 0.76236 0.0 0.0 533.2846489419586 82.06698023013905 615.3516291720977 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.76236 - 127 + 1 1.174 249998.4 1.0 7748 5466 13197 HBL1_DMSO_200M_050219_1,13216 HBL1_DMSO_200M_050219_1,13216, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13218 66.866 2.4 11981000.0 25 0 1157000.0 + 3669 DAENAMRYI 9 57 541.7501112633328 1081.4856695934654 2 541.7506591677666 MULTI CID FTMS 0 0 0 13217 16673583.0 0.7869041508462287 -1 0.13336181640625 1 Unmodified _DAENAMRYI_ ENSG00000114503|ENST00000321256|NCBP2;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;ENST00000479647.1_1_3:196664263-196668636:-|nuORF;nc|ENSG00000114503|P52298-2|NCBP2 47.74868867922204 0.0453060283459952 3 {[DA]|[EG]}ENAMRY{I|L} 9 0 + 80.895 0.0 0.0 7.48 7.48 92.094 0.0 0.0 0.0 69.63619747270019 9.921525057367404 9.921525057367404 9.208187539523747 0 1.3494850021680094 2.0 0.0 0.4247425010840047 + + {[DA]|[EG]}ENAMRY{I|L};{[DA]|[EG]}EGGAMRY{I|L};WENAM[VG]Y{I|L};{[DA]|[EG]}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{NN|[MP]|[D{I|L}]|[EV]}Y{I|L};{[DA]|[EG]}E[C(Carbamidomethyl (C))R][VG]Y{I|L};WEGGAM[VG]Y{I|L};{[DA]|[EG]}[WQ]M[VG]Y{I|L} 7.48;6.6286;5.6307;4.5691;4.5691;4.3865;4.1068 +;-;-;-;-;-;- + 82 + 1 1.174 28261.0 1.0 7749 5467 13217 HBL1_DMSO_200M_050219_1,13218 HBL1_DMSO_200M_050219_1,13218,DAENAMRYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13219 66.867 5.3 7569000.0 25 0 1361400.0 + 37081 TGLAPPLV 8 78 384.23556222770833 766.4565715222167 2 384.2353698611259 MULTI CID FTMS 0 0 0 13217 6545255.5 0.3397104451304707 2 -0.11920166015625 2 Unmodified _TGLAPPLV_ REV__ENST00000419218.5_1_3:49507805-49526111:+|nuORF 2.577480529830294 0.808687252328423 3 N 1 -1 1.2591 0.0 0.0 0.16427 0.0 0.0 580.3923300444808 68.99895654849843 649.3912865929792 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.16427 - 3 + 1 1.174 35995.1 1.0 7750 5467 13217 HBL1_DMSO_200M_050219_1,13219 HBL1_DMSO_200M_050219_1,13219,TGLAPPLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13220 66.868 2.5 17216000.0 25 0 1668600.0 + 4507 DAYKIRIRI 9 69 383.2364265038003 1146.687450111601 3 383.2363464236259 MULTI CID FTMS 0 0 0 13217 10538863.0 0.6016229015852247 -1 0.13336181640625 3 Unmodified _DAYKIRIRI_ ENSG00000143622|ENST00000368323|RIT1;nc|ENSG00000143622|Q92963-2|RIT1;nc|ENSG00000143622|Q92963-3|RIT1 10.823927491677226 0.5436922275383211 3 DA{I|L}Y 4 6 54.993 0.0 0.0 4.7958 0.0 0.0 0.0 681.4528511816561 681.4528511816561 49.50827206916173 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 DA{I|L}Y 4.7958 - 17 + 1 1.174 43048.3 1.0 7751 5467 13217 HBL1_DMSO_200M_050219_1,13220 HBL1_DMSO_200M_050219_1,13220,DAYKIRIRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13221 66.869 6.5 6411900.0 25 0 865200.0 42887 VVPAALKVV 9 74 448.3025612293231 894.5905695254462 2 448.3025695681572 MULTI CID FTMS 0 0 0 13217 5042426.0 0.5072483508276644 2 -0.11920166015625 4 Unmodified _VVPAALKVV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 23.1484247019978 0.2366544122328345 3 [PA]A{I|L}KV 6 3 37.625 0.0 0.0 4.2058 0.0 0.0 0.0 312.1931401514382 312.1931401514382 -2.8207499751527365 0.0 -2.8207499751527365 0.0 0 0.0 1.2218487496163564 0.0 0.0 + [PA]A{I|L}KV 4.2058 + + 91 1 1.174 38055.0 1.0 7752 5467 13217 HBL1_DMSO_200M_050219_1,13221 HBL1_DMSO_200M_050219_1,13221,VVPAALKVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13222 66.871 8.8 3033400.0 25 0 282330.0 + 29689 QPFEDTPVV 9 53 516.2558955175426 1030.4972381018852 2 516.2562744021416 MULTI CID FTMS 0 0 0 13217 2976474.75 0.3476135917191468 2 -0.11920166015625 5 Unmodified _QPFEDTPVV_ ENSG00000123485|ENST00000411486|HJURP;ENST00000454020.1_3_2:234756047-234763110:-|nuORF;nc|ENSG00000123485|Q8NCD3-2|HJURP;nc|ENSG00000123485|Q8NCD3-3|HJURP 21.74664581756881 0.2544899275067181 3 [{M(Oxidation (M))|F}E]D[QP]T 6 5 24.767 0.0 0.0 2.4034 0.0 0.0 0.0 310.17729655541785 310.17729655541785 7.77696854845523 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.9247425010840048 0.3807196863200844 [{M(Oxidation (M))|F}E]D[QP]T 2.4034 - 17 1 1.174 33541.4 1.0 7753 5467 13217 HBL1_DMSO_200M_050219_1,13222 HBL1_DMSO_200M_050219_1,13222,QPFEDTPVV False True QPFEDTPVV 66.870546 516.256274402142 143906416.0 13217.0 nc|ENSG00000123485|Q8NCD3-2|HJURP;;nc|ENSG00000123485|Q8NCD3-3|HJURP;;ENST00000454020.1_3_2:234756047-234763110:-|nuORF;;ENSG00000123485|ENST00000411486|HJURP 2.11034639676412 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13223 66.872 12.0 4992000.0 25 0 406160.0 + 44766 YPLQAQPGGL 10 95 522.2813048623098 1042.5480567914194 2 522.2816039919853 MULTI CID FTMS 0 0 0 13217 1786326.0 0.6837071060220503 2 -0.11920166015625 6 Unmodified _YPLQAQPGGL_ REV__ENST00000259006.7_2_17:61775487-61775829:-|nuORF 15.847184025352805 0.5816416552707754 3 [TA]HVV{I|L}{I|L}T[CS] 10 -1 + 32.962 0.0 0.0 3.1617 3.1617 70.603 0.0 0.0 0.0 10.743497992151385 1.9530523850406567 1.9530523850406567 2.0274906793294534 0 0.3252574989159953 0.958607314841775 0.0 0.0 [TA]HVV{I|L}{I|L}T[CS];{[HG]|PP}D{I|L}YA{I|L}AA{I|L};{[HG]|PP}D{I|L}{I|L}YAAA{I|L};{[HG]|PP}D{I|L}YA[RV]{I|L};{[HG]|PP}D{I|L}Y{I|L}AAA{I|L};{[HG]|PP}D{I|L}{I|L}RYG{I|L};{[HG]|PP}D{I|L}{I|L}Y{[NV]|[RG]}{I|L};{[HG]|PP}D{I|L}{I|L}VVH[PG];{[HG]|PP}D{I|L}Y{I|L}{[NV]|[RG]}{I|L};{[HG]|PP}D{I|L}R{I|L}YG{I|L} 3.1617;2.9672;2.8215;2.6294;2.5096;2.5002;2.4837;2.3469;2.1717;2.0194 -;-;-;-;-;-;-;-;-;- 456 + 1 1.174 51980.8 1.0 7754 5467 13217 HBL1_DMSO_200M_050219_1,13223 HBL1_DMSO_200M_050219_1,13223,YPLQAQPGGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13224 66.873 11.0 2857400.0 25 0 133200.0 24764 MPHLSMQQV 9 70 535.76056334272 1069.50657375224 2 535.7603027224541 MULTI CID FTMS 0 0 0 13217 1549006.125 0.1368446457204192 3 -0.20367431640625 7 Unmodified _MPHLSMQQV_ ENSG00000142207|ENST00000382751|URB1 10.823927491677226 0.5436922275383211 3 [H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}SQMN{I|L} 9 7 + 23.704 0.0 0.0 2.2164 2.2164 68.441 0.0 0.0 0.0 0.0152282476275864 9.240310249255328 0.0152282476275864 1.7069622716897506 0 0.3792816040978115 1.0 0.0 0.0 [H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}SQMN{I|L};[H{I|L}][WE]QMN{I|L};{[QS]|[NT]}V[HN]QMN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HN]SQMN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S[HN]QMN{I|L};[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}S[AG]MN{I|L};[H{I|L}][WE][AG]MN{I|L};{[QS]|[NT]}V[HN][AG]MN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HN]S[AG]MN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S[HN][AG]MN{I|L} 2.2164;2.0568;1.9547;1.6254;1.5086;1.3554;1.1908;1.0937;0.76445;0.64763 -;-;-;-;-;-;-;-;-;- 169 1 1.174 32370.7 1.0 7755 5467 13217 HBL1_DMSO_200M_050219_1,13224 HBL1_DMSO_200M_050219_1,13224,MPHLSMQQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13225 66.874 30.0 2625300.0 25 0 310240.0 + 36434 SYYKDALRF 9 86 388.2011565620597 1161.581640286379 3 388.2010070681572 MULTI CID FTMS 0 0 0 13217 1663963.375 0.6486332550168101 -2 0.1999130249023437 8 Unmodified _SYYKDALRF_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF;nc|ENSG00000185627|Q9UNM6-2|PSMD13 32.78568957990786 0.1150597335874693 3 {[{M(Oxidation (M))|F}C]|[YS]}YKDA{I|L}R{M(Oxidation (M))|F} 9 0 + 49.429 0.0 0.0 4.2553 4.2553 79.038 0.0 0.0 0.0 35.93427324147246 10.330697299809266 10.330697299809266 6.478174818886373 0 0.25 0.0 0.0 0.75 + + {[{M(Oxidation (M))|F}C]|[YS]}YKDA{I|L}R{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}YKW{I|L}R{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}YK{M(Oxidation (M))|F}[KA]QQ;{[{M(Oxidation (M))|F}C]|[YS]}Y{M(Oxidation (M))|F}K[KA]QQ 4.2553;3.6976;1.9025;1.4918 +;-;-;- + 179 + 1 1.174 65867.0 1.0 7756 5467 13217 HBL1_DMSO_200M_050219_1,13225 HBL1_DMSO_200M_050219_1,13225,SYYKDALRF True True SYYKDALRF 66.874084 388.201007068157 67792550.0 13217.0 ENST00000527047.5_1_11:237024-247462:+|nuORF;;ENSG00000185627|ENST00000532097|PSMD13;;nc|ENSG00000185627|Q9UNM6-2|PSMD13 8.702030022939047 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13226 66.875 23.0 2159100.0 25 0 375510.0 40593 VKVHTWVS 8 77 478.26999700867896 954.525441084158 2 478.2696716189384 MULTI CID FTMS 0 0 0 13217 1598002.75 0.1974830531593681 -7 0.5582199096679688 9 Unmodified _VKVHTWVS_ ENST00000506485.1_1_5:114938797-114938854:+|nuORF;ENST00000508517.1_1_5:114938797-114955882:+|nuORF 2.577480529830294 0.808687252328423 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.174 46566.4 1.0 7757 5467 13217 HBL1_DMSO_200M_050219_1,13226 HBL1_DMSO_200M_050219_1,13226,VKVHTWVS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13227 66.876 27.0 1555200.0 25 0 296980.0 + 36473 TAASVLRI 8 66 415.75833303580447 829.502113138409 2 415.7584106326103 MULTI CID FTMS 0 0 0 13217 1429822.75 0.6739816489284602 -1 0.13336181640625 10 Unmodified _TAASVLRI_ ENSG00000119574|ENST00000594051|ZBTB45 34.40172386719151 0.3279500639400574 3 TAASV{I|L}[R{I|L}] 8 0 + 77.626 0.0 0.0 9.3581 9.3581 97.009 0.0 0.0 0.0 70.63608784304506 8.737125054200234 8.737125054200234 15.740312677277188 0 0.9247425010840048 2.0 0.0 0.3252574989159953 + + TAASV{I|L}[R{I|L}];TAA{I|L}[VS][R{I|L}];TA{I|L}[SG]{I|L}[R{I|L}];TA{I|L}A[VS][R{I|L}];T[QT]V{I|L}[R{I|L}] 9.3581;7.4606;6.8578;6.4949;3.1619 +;-;-;-;- + 90 + 1 1.174 41210.3 1.0 7758 5467 13217 HBL1_DMSO_200M_050219_1,13227 HBL1_DMSO_200M_050219_1,13227,TAASVLRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13228 66.878 21.0 1782900.0 25 0 234590.0 + 23690 LTSTISTGVNV 11 75 546.3018798479263 1090.5892067626526 2 546.8046752810478 MULTI CID FTMS 0 0 0 13217 1069782.375 0.6245547226708473 -1 0.13336181640625 11 Unmodified _LTSTISTGVNV_ REV__ENSG00000198569|ENST00000673835|SLC34A3 8.745405648335112 0.8338865417133445 3 {I|L} 1 -1 10.837 0.0 0.0 0.99372 0.0 0.0 959.4943714128464 0.0 959.4943714128464 0.0 0.3747960847772855 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.99372 + + 65 + 1 1.174 32956.9 1.0 7759 5467 13217 HBL1_DMSO_200M_050219_1,13228 HBL1_DMSO_200M_050219_1,13228,LTSTISTGVNV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13229 66.879 25.0 1183300.0 25 0 139820.0 10382 FSSDNLTAI 9 66 484.2399407525362 966.4653285718724 2 484.2397949099541 MULTI CID FTMS 0 0 0 13217 918915.25 0.44993646325892 -1 0.13336181640625 12 Unmodified _FSSDNLTAI_ ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;nc|ENSG00000169432|Q15858-4|SCN9A 12.531546534597751 0.4974689918368763 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 3 6 23.301 0.0 0.0 2.4109 0.0 0.0 0.0 616.2564106854068 616.2564106854068 7.727562184969372 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 2.4109 - 43 1 1.174 29808.5 1.0 7760 5467 13217 HBL1_DMSO_200M_050219_1,13229 HBL1_DMSO_200M_050219_1,13229,FSSDNLTAI False True SFIENSSAL 66.878798 484.239794909954 9674234.0 13217.0 nc|ENSG00000111913|Q9Y4F9|RIPOR2;;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;;chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;;ENSG00000111913|ENST00000643898|RIPOR2 2.374289055665334 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13230 66.88 42.0 1001100.0 25 0 67175.0 + 13843 HVFDHPWETV 10 61 633.798560762359 1265.582568591518 2 633.7988159060478 MULTI CID FTMS 0 0 0 13217 884510.875 0.625515540104282 -1 0.13336181640625 13 Unmodified _HVFDHPWETV_ ENSG00000101166|ENST00000355937|PRELID3B;ENST00000466051.1_1_20:57613469-57617839:-|nuORF;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 45.69961567697781 0.105390671673896 3 [WP]{[QS]|[NT]}HPWE{[TV]|[{I|L}S]} 10 4 + 51.942 0.0 0.0 4.1042 4.1042 84.426 0.0 0.0 0.0 10.413705284069223 9.735834254131106 9.735834254131106 20.51152522447381 0 0.7059771852360797 1.3979400086720375 0.4247425010840047 0.0 [WP]{[QS]|[NT]}HPWE{[TV]|[{I|L}S]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YT]HPWE{[TV]|[{I|L}S]} 4.1042;2.4835 -;- 183 1 1.174 35668.7 1.0 7761 5467 13217 HBL1_DMSO_200M_050219_1,13230 HBL1_DMSO_200M_050219_1,13230,HVFDHPWETV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13231 66.881 26.0 1244000.0 25 0 185760.0 + 148 AALNGLYRV 9 67 488.7820917428824 975.5496305525648 2 488.7815734744072 MULTI CID FTMS 0 0 0 13217 814185.5 0.3645564411547314 2 -0.11920166015625 14 Unmodified _AALNGLYRV_ ENSG00000161671|ENST00000334976|EMC10;nc|ENSG00000161671|Q5UCC4-2|EMC10 21.74664581756881 0.2544899275067181 3 AA{I|L}N 4 5 38.729 0.0 0.0 3.9699 0.0 0.0 0.0 603.3270125249688 603.3270125249688 26.25447181216778 0.0 0.0 0.0 0 0.7302046884880937 1.5228787452803376 0.0 0.0 + AA{I|L}N 3.9699 + + 30 + 1 1.174 31505.6 1.0 7762 5467 13217 HBL1_DMSO_200M_050219_1,13231 HBL1_DMSO_200M_050219_1,13231,AALNGLYRV False True AALNGLYRV 66.881181 488.781573474407 15878302.0 13217.0 ENSG00000161671|ENST00000334976|EMC10;;nc|ENSG00000161671|Q5UCC4-2|EMC10 5.258366425832112 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13232 66.882 23.0 1659400.0 25 0 190980.0 -1 FVCLSTAIML 10 58 557.2882074666716 1112.561862000143 2 557.2888061404228 MULTI CID FTMS 0 0 0 13217 833566.5 0.5733852170590333 -1 0.13336181640625 15 Oxidation (M) _FVCLSTAIM(Oxidation (M))L_ ENST00000437916.2_1_2:45148822-45149500:-|nuORF 10.823927491677226 0.6659270209832991 3 [{M(Oxidation (M))|F}V]DDY 5 -1 14.693 0.0 0.0 1.3206 0.0 0.0 0.0 470.2736605279906 470.2736605279906 2.245462655597093 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [{M(Oxidation (M))|F}V]DDY 1.3206 - 22 + 1 1.174 37710.3 1.0 7763 5467 13217 HBL1_DMSO_200M_050219_1,13232 HBL1_DMSO_200M_050219_1,13232,FVCLSTAIML False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13233 66.884 41.0 1139300.0 25 0 116360.0 + 36436 SYYKDALRF 9 57 581.7982609628498 1161.5819689924997 2 581.7981445193291 MULTI CID FTMS 0 0 0 13217 767652.5625 0.5756334693395497 -1 0.13336181640625 16 Unmodified _SYYKDALRF_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF;nc|ENSG00000185627|Q9UNM6-2|PSMD13 15.248480904072842 0.4239247793462406 3 SYYKD 5 4 62.206 0.0 0.0 5.3553 0.0 0.0 0.0 502.27896057463056 502.27896057463056 50.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + SYYKD 5.3553 + + 50 + 1 1.174 40849.9 1.0 7764 5467 13217 HBL1_DMSO_200M_050219_1,13233 HBL1_DMSO_200M_050219_1,13233,SYYKDALRF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13234 66.885 27.0 1596500.0 25 0 128940.0 + -1 FPYMTHPSV 9 90 539.2824642970643 1076.5503756609285 2 539.2835571169853 MULTI CID FTMS 0 0 0 13217 617385.25 0.607609571506426 -1 0.13336181640625 17 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))LC(Carbamidomethyl (C))RQQL_ nc|ENSG00000204842|Q99700-5|ATXN2;nc|ENSG00000204842|Q99700|ATXN2;ENST00000484991.1_1_12:111890618-111891658:-|nuORF;ENSG00000204842|ENST00000673436|ATXN2 11.114462752807354 0.7467182956244686 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}V[NS]PK 9 -1 + 25.245 0.0 0.0 2.345 2.345 66.973 0.0 0.0 0.0 0.631197685462908 9.76091028235406 0.631197685462908 0.631197685462908 0 0.0 0.958607314841775 0.3494850021680094 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}V[NS]PK;{[QN]|[E{I|L}]|[KN]}{I|L}[WE]YPK;{[QN]|[E{I|L}]|[KN]}QYV[NS]PK;{[QN]|[E{I|L}]|[KN]}{I|L}[YN][NS]PK;{[QN]|[E{I|L}]|[KN]}[AG]YV[NS]PK 2.345;2.2864;2.2389;1.8692;1.3835 -;-;-;-;- 201 1 1.174 40589.4 1.0 7765 5467 13217 HBL1_DMSO_200M_050219_1,13234 HBL1_DMSO_200M_050219_1,13234,LMLCRQQL False False FPYMTHPSV 66.884723 539.283557116985 9170185.0 13217.0 nc|ENSG00000204842|Q99700-5|ATXN2;;nc|ENSG00000204842|Q99700|ATXN2;;ENST00000484991.1_1_12:111890618-111891658:-|nuORF;;ENSG00000204842|ENST00000673436|ATXN2 5.399758974711101 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13235 66.886 30.0 1486800.0 25 0 306440.0 + 42634 VTVGPKAL 8 71 392.7487775150557 783.4830020969115 2 393.2505676150322 MULTI CID FTMS 0 0 0 13217 561197.25 0.1637189024274173 3 -0.20367431640625 18 Unmodified _VTVGPKAL_ REV__ENSG00000113889|ENST00000644859|KNG1 0.6903765706972694 0.8201419426409876 3 V 1 -1 9.2082 0.0 0.0 1.1753 0.0 0.0 666.4035323476912 0.0 666.4035323476912 0.0 5.713337517843655 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1753 + + 6 + 1 1.174 41712.0 1.0 7766 5467 13217 HBL1_DMSO_200M_050219_1,13235 HBL1_DMSO_200M_050219_1,13235,VTVGPKAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13236 66.888 79.0 1178700.0 25 0 121760.0 + 4306 DARLFTEKI 9 111 364.87316843653576 1091.597675909807 3 364.8732787966728 MULTI CID FTMS 0 0 0 13217 560751.4375 0.5483159068896951 -2 0.1999130249023437 19 Unmodified _DARLFTEKI_ ENSG00000128915|ENST00000261520|ICE2 47.7319792270244 0.0453426645642791 3 {[DA]|[EG]}R{I|L}{M(Oxidation (M))|F}P 6 4 38.377 0.0 0.0 3.5157 0.0 0.0 0.0 389.2009833651386 389.2009833651386 15.814243664528576 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.3494850021680094 0.0 {[DA]|[EG]}R{I|L}{M(Oxidation (M))|F}P 3.5157 - 497 1 1.174 78192.6 1.0 7767 5467 13217 HBL1_DMSO_200M_050219_1,13236 HBL1_DMSO_200M_050219_1,13236,DARLFTEKI True True DARLFTEKI 66.887706 364.873278796673 8185760.0 13217.0 ENSG00000128915|ENST00000261520|ICE2 4.90186087290446 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13237 66.889 51.0 934420.0 25 0 56257.0 -1 0 71 902.9182248884156 1803.8218968436315 2 902.9189330935478 MULTI CID FTMS 0 0 0 13217 551721.125 0.1629806158124285 3 -0.20367431640625 20 3 {NN|[MP]|[D{I|L}]|[EV]}NS{I|L}DD 7 -1 52.291 0.0 0.0 2.8989 0.0 0.0 0.0 1028.4737272481814 1028.4737272481814 9.036757287974666 0.0 0.0 0.0 0 0.0 1.2218487496163564 2.038725489996436 0.0 {NN|[MP]|[D{I|L}]|[EV]}NS{I|L}DD 2.8989 - 581 1 1.174 37021.6 1.0 7768 5467 13217 HBL1_DMSO_200M_050219_1,13237 HBL1_DMSO_200M_050219_1,13237, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13239 66.893 8.9 5027200.0 25 0 210460.0 + 43347 WNPRRWWRWCW 11 66 866.4161607997353 0 866.4164306521416 PEAK CID FTMS 0 0 0 13238 4288034.5 1.0 0 0.0 1 Unmodified _WNPRRWWRWCW_ ENST00000564348.5_1_19:7982609-7983760:+|nuORF;ENST00000566166.1_1_19:7982552-7983971:+|nuORF 0.0 0.4761840153648598 3 {I|L}NADQ 5 10 32.206 0.0 0.0 1.8608 0.0 0.0 456.1862128690344 730.3640230768186 1186.550235945853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}NADQ 1.8608 - 187 + 1 1.174 39902.9 1.0 7769 5468 13238 HBL1_DMSO_200M_050219_1,13239 HBL1_DMSO_200M_050219_1,13239,WNPRRWWRWCW False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13240 66.894 9.5 6152100.0 25 0 1521200.0 + 5017 DGVPVIKV 8 56 413.7553654993275 825.4961780654551 2 413.7552673220634 MULTI CID FTMS 0 0 0 13238 6238659.0 1.0 0 0.0 2 Unmodified _DGVPVIKV_ ENSG00000109270|ENST00000499666|LAMTOR3 15.847184025352805 0.6768015514314958 3 [VP]{I|L}K 4 4 29.208 0.0 0.0 3.5383 0.0 0.0 0.0 385.1726989604989 385.1726989604989 -0.7841822988147129 0.0 -0.7841822988147129 0.0 0 0.0 1.3010299956639813 0.0 0.0 + [VP]{I|L}K 3.5383 + + 59 1 1.174 49344.9 1.0 7770 5468 13238 HBL1_DMSO_200M_050219_1,13240 HBL1_DMSO_200M_050219_1,13240,DGVPVIKV False True DGVPVIKV 66.894365 413.755267322063 155057796.0 13238.0 ENSG00000109270|ENST00000499666|LAMTOR3 5.740509192148845 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13241 66.896 21.0 2699900.0 25 0 620150.0 119 AALAALALA 9 74 392.7487775150557 783.4830020969115 2 392.7484619021416 MULTI CID FTMS 0 0 0 13238 3002415.0 0.3828433140212475 4 -0.3126449584960937 3 Unmodified _AALAALALA_ ENSG00000170801|ENST00000307358|HTRA3;ENSG00000267221|ENST00000587304|C17orf113;nc|ENSG00000170801|P83110-2|HTRA3;REV__ENSG00000131507|ENST00000253814|NDFIP1;REV__ENST00000509436.1_1_5:141488539-141511465:+|nuORF;REV__nc|ENSG00000131507|Q9BT67-2|NDFIP1 0.0 0.9146841635160942 3 V 1 9 10.278 0.0 0.0 1.3118 0.0 0.0 666.4034331655623 0.0 666.4034331655623 0.0 9.168342891167374 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3118 - 4 + 1 1.174 49632.7 1.0 7771 5468 13238 HBL1_DMSO_200M_050219_1,13241 HBL1_DMSO_200M_050219_1,13241,AALAALALA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13242 66.897 24.0 1778400.0 25 0 386050.0 + 23659 LTRQEKVQ 8 68 501.2911762178067 1000.5677995024134 2 501.2908813357353 MULTI CID FTMS 0 0 0 13238 2118773.25 0.5805084060804557 -6 0.429718017578125 4 Unmodified _LTRQEKVQ_ REV__ENSG00000216937|ENST00000639629|CCDC7 5.760428011301431 0.7893668129297577 3 {I|L} 1 -1 10.181 0.0 0.0 1.0175 0.0 0.0 869.4727200119822 0.0 869.4727200119822 0.0 0.0924170284700665 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0175 + + 9 + 1 1.174 38897.8 1.0 7772 5468 13238 HBL1_DMSO_200M_050219_1,13242 HBL1_DMSO_200M_050219_1,13242,LTRQEKVQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13243 66.899 92.0 834090.0 25 0 101630.0 -1 MILFLQIV 8 118 509.8039084322093 1017.5932639312186 2 509.8042480349541 MULTI CID FTMS 0 0 0 13238 735519.375 0.3111392971588612 -6 0.429718017578125 5 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MILFLQIV_ ENST00000431138.5_1_7:87516207-87516695:+|nuORF 6.354104778181461 0.7857632046190106 3 V 1 -1 11.594 0.0 0.0 1.1393 0.0 0.0 900.5138933641273 0.0 900.5138933641273 0.0 -5.406075122407689 -5.406075122407689 0.0 0 0.0 0.0 0.0 0.0 V 1.1393 + + 67 + 1 1.174 63257.5 1.0 7773 5468 13238 HBL1_DMSO_200M_050219_1,13243 HBL1_DMSO_200M_050219_1,13243,MILFLQIV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13244 66.903 257.0 826870.0 25 0 54468.0 + 19607 ALANQIPTV 9 198 462.7618255664855 923.509098199771 2 463.7687866091728 MULTI CID FTMS 0 0 0 13238 737654.4375 1.0 0 0.0 6 Unmodified _LGAQQLPTP_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 28.486842064014134 0.1687311288560894 3 [{I|L}A]GNAA{I|L} 7 7 41.335 0.0 0.0 4.4759 0.0 0.0 0.0 310.14017291706995 310.14017291706995 16.14963687939501 0.0 0.0 0.0 0 0.0 2.0 0.0 1.1237125054200234 [{I|L}A]GNAA{I|L} 4.4759 - 1016 1 1.174 160883.5 1.0 7774 5468 13238 HBL1_DMSO_200M_050219_1,13244 HBL1_DMSO_200M_050219_1,13244,LGAQQLPTP False False ALANQIPTV 66.903498 463.768786609173 5359320.5 13238.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 5.73577356338501 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13245 66.906 102.0 754330.0 25 0 94703.0 + 4325 DARVAITI 8 94 429.7562772130093 857.4980014928186 2 429.7561218142509 MULTI CID FTMS 0 0 0 13238 589005.75 0.5966652915134815 3 -0.2695388793945312 7 Unmodified _DARVAITI_ ENSG00000102858|ENST00000262370|MGRN1;ENSG00000141576|ENST00000269391|RNF157;nc|ENSG00000102858|O60291-3|MGRN1;nc|ENSG00000102858|O60291-4|MGRN1;nc|ENSG00000102858|O60291|MGRN1;nc|ENSG00000141576|Q96PX1-2|RNF157 25.399314129420983 0.5099049743284904 3 {[DA]|[EG]}G[R{I|L}]{I|L}T{I|L} 8 3 + 27.707 0.0 0.0 3.2311 3.2311 71.116 0.0 0.0 0.0 6.152340397648857 10.1093092803169 6.152340397648857 2.2834748590793907 0 0.6549471895720985 1.5228787452803376 0.3252574989159953 0.0 {[DA]|[EG]}G[R{I|L}]{I|L}T{I|L};{[DA]|[EG]}R{[VA]|[{I|L}G]}{I|L}T{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[R{I|L}]{I|L}T{I|L};[KP]{[WT]|[RM]}{I|L}T{I|L};[{I|L}T]N[R{I|L}]E{I|L} 3.2311;2.9648;1.5228;1.0952;0.48214 -;+;-;-;- + 73 1 1.174 68329.1 1.0 7775 5468 13238 HBL1_DMSO_200M_050219_1,13245 HBL1_DMSO_200M_050219_1,13245,DARVAITI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13246 66.908 139.0 739420.0 25 0 77185.0 + 5180 DINSIDNL 8 119 452.2243460445571 902.4341391559142 2 452.2245666384697 MULTI CID FTMS 0 0 0 13238 582853.75 0.9434147030360932 3 -0.2695388793945312 8 Unmodified _DINSIDNL_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 44.40701690623563 0.1655546087385432 3 {NN|[MP]|[D{I|L}]|[EV]}NS 4 4 39.422 0.0 0.0 4.3684 0.0 0.0 0.0 470.224285367559 470.224285367559 12.116231051101998 0.0 0.0 0.0 0 0.0 2.0 0.5994850021680094 0.6516061991826032 + {NN|[MP]|[D{I|L}]|[EV]}NS 4.3684 + + 185 1 1.174 84386.3 1.0 7776 5468 13238 HBL1_DMSO_200M_050219_1,13246 HBL1_DMSO_200M_050219_1,13246,DINSIDNL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13247 66.91 90.0 699460.0 25 0 74288.0 + 27567 LPIAPSHVI 9 94 472.79166132949246 943.5687697257848 2 473.7902709841728 MULTI CID FTMS 0 0 0 13238 536854.125 1.0 0 0.0 9 Unmodified _PLATSKKLS_ ENSG00000184863|ENST00000401878|RBM33;ENST00000307403.6_1_7:155532339-155538302:+|nuORF 13.50788311687929 0.4710407108020397 3 [{I|L}P]A{I|L} 4 5 29.297 0.0 0.0 3.1049 0.0 0.0 0.0 546.2869148276005 546.2869148276005 13.433633642175025 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P]A{I|L} 3.1049 - 291 1 1.174 52213.4 1.0 7777 5468 13238 HBL1_DMSO_200M_050219_1,13247 HBL1_DMSO_200M_050219_1,13247,PLATSKKLS False False LPIAPSHVI 66.910433 473.790270984173 4691131.0 13238.0 ENSG00000184863|ENST00000401878|RBM33;;ENST00000307403.6_1_7:155532339-155538302:+|nuORF 3.609130064646403 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13248 66.913 101.0 661230.0 25 0 68295.0 + 19075 LDRIEELLT 9 116 551.310870277196 1100.607187621192 2 551.3110839724541 MULTI CID FTMS 0 0 0 13238 493627.46875 0.1967125678627568 8 -0.6134109497070312 10 Unmodified _LDRIEELLT_ REV__ENSG00000166938|ENST00000319212|DIS3L;REV__nc|ENSG00000166938|Q8TF46-2|DIS3L;REV__nc|ENSG00000166938|Q8TF46-4|DIS3L 24.020572477871973 0.2255576514309169 3 {[TV]|[{I|L}S]}SK[QP]D{I|L}[{I|L}T] 10 -1 + 22.637 0.0 0.0 2.0568 2.0568 78.4 0.0 0.0 0.0 0.2410497646861387 0.4440873258899813 0.2410497646861387 9.542425094393248 0 0.4247425010840047 1.0 0.3494850021680094 0.0 {[TV]|[{I|L}S]}SK[QP]D{I|L}[{I|L}T];{[WT]|[RM]}K[QP]D{I|L}[{I|L}T];{[CA]|SS}{I|L}K[QP]D{I|L}[{I|L}T];[VS]TK[QP]D{I|L}[{I|L}T];{[TV]|[{I|L}S]}SK[QP]{[TV]|[{I|L}S]}{[QN]|[E{I|L}]|[KN]} 2.0568;1.1897;0.77113;0.74189;0.19667 -;-;-;-;- 260 1 1.174 55452.6 1.0 7778 5468 13238 HBL1_DMSO_200M_050219_1,13248 HBL1_DMSO_200M_050219_1,13248,LDRIEELLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13249 66.918 300.0 501880.0 25 0 14901.0 + + -1 SYVTGAVL 8 144 809.8845461102037 1617.7545392872073 2 809.8874999880791 MULTI CID FTMS 0 0 0 13238 412316.8125 1.0 0 0.0 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))HSRFDWFPWLW_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 2.735195868890462 0.8622431031272658 3 MPN{I|L}NADQGVDG{M(Oxidation (M))|F}{I|L}Q 15 -1 + 167.81 0.0 0.0 10.373 10.373 94.174 0.0 0.0 0.0 31.918855262389144 13.27832488075947 13.27832488075947 9.030899869919438 0 4.346910013008056 1.5228787452803376 1.4604093769761874 1.4489700043360187 MPN{I|L}NADQGVDG{M(Oxidation (M))|F}{I|L}Q;MPGG{I|L}NADQGVDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}GGADQGVDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NAD[AG]GVDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NWQGVDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NADQGV[{M(Oxidation (M))|F}E]RQ;MPN{I|L}NADQG[RD]{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}GGWQGVDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NW[AG]GVDG{M(Oxidation (M))|F}{I|L}Q 10.373;9.8149;9.8149;9.8149;9.7901;9.7243;9.4511;9.2378;9.2307;9.2307 -;-;-;-;-;-;-;-;-;- 36370 + 1 1.174 104993.9 1.0 7779 5468 13238 HBL1_DMSO_200M_050219_1,13249 HBL1_DMSO_200M_050219_1,13249,HSRFDWFPWLW False False SYVTGAVL 66.918125 809.887499988079 4869341.0 13238.0 ENSG00000242612|ENST00000219481|DECR2;;ENST00000439661.5_1_16:457533-461575:+|nuORF;;nc|ENSG00000242612|Q9NUI1-3|DECR2 4.349905331929524 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13250 66.924 334.0 443260.0 25 0 38360.0 -1 FYPECEIRMM 10 138 469.8628048801119 1406.5665852405357 3 469.8629333376884 MULTI CID FTMS 0 0 0 13238 375497.34375 1.0 0 0.0 12 Carbamidomethyl (C),2 Oxidation (M) _FYPEC(Carbamidomethyl (C))EIRM(Oxidation (M))M(Oxidation (M))_ ENSG00000066923|ENST00000615138|STAG3;nc|ENSG00000292277|Q9UJ98-2|STAG3;nc|ENSG00000292277|Q9UJ98-3|STAG3;nc|ENSG00000292277|Q9UJ98|STAG3 10.898955630103616 0.6646681216928481 3 WCE{I|L}RTM 7 -1 30.92 0.0 0.0 2.1982 0.0 0.0 469.1656347770258 0.0 469.1656347770258 0.0 3.032287071594784 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3054621874040891 WCE{I|L}RTM 2.1982 - 768 + 1 1.174 116961.5 1.0 7780 5468 13238 HBL1_DMSO_200M_050219_1,13250 HBL1_DMSO_200M_050219_1,13250,FYPECEIRMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13251 66.93 331.0 456360.0 25 0 70463.0 + 44854 YPPGSTVLV 9 106 932.5096698587798 931.5023933921798 1 932.5106689333916 MULTI CID FTMS 0 0 0 13238 354887.125 0.3266357084732667 16 -1.2659835815429688 13 Unmodified _YPPGSTVLV_ ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 89.42679046578446 0.015225546354407 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PGSTV{I|L}V 9 0 + 75.684 0.0 0.0 8.125 8.125 96.078 0.0 0.0 0.0 24.76203644159419 34.715168808616355 24.76203644159419 18.723637474483468 0 0.4247425010840047 2.0 1.4604093769761874 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PGSTV{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[NV]|[RG]}EV{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{[NV]|[RG]}V{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PG{[WT]|[RM]}{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}[QA]{I|L}V;[VP]NEYV{I|L}V;[VP]NEVY{I|L}V;{[QS]|[NT]}AAGSTV{I|L}V;{[QS]|[NT]}[QA]STV{I|L}V;[VP]NYEV{I|L}V 8.125;6.1149;6.06;5.279;4.6818;4.5334;4.4739;4.2952;4.2403;4.2131 +;-;-;-;-;-;-;-;-;- + 820 1 1.174 102447.8 1.0 7781 5468 13238 HBL1_DMSO_200M_050219_1,13251 HBL1_DMSO_200M_050219_1,13251,YPPGSTVLV True True YPPGSTVLV 66.930221 932.510668933392 19049836.0 13238.0 nc|ENSG00000183283|Q15038-3|DAZAP2;;ENSG00000183283|ENST00000412716|DAZAP2;;nc|ENSG00000183283|Q15038-2|DAZAP2;;nc|ENSG00000183283|Q15038-6|DAZAP2 7.055107275644938 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13252 66.936 302.0 445320.0 25 0 39559.0 + + 14337 KTFEDNLIEA 10 140 589.8008626652987 1177.5871723973974 2 590.2979614138603 MULTI CID FTMS 0 0 0 13238 299835.375 0.4093321637070634 -6 0.429718017578125 14 Unmodified _IERGFMNIQA_ nc|ENSG00000044459|Q9NXG0|CNTLN;nc|ENSG00000044459|Q9NXG0-3|CNTLN;ENSG00000044459|ENST00000380647|CNTLN 29.081581746732265 0.3152867722954398 3 [YT]N{I|L}EN{I|L}{I|L}[QA] 10 -1 + 54.491 0.0 0.0 4.6273 4.6273 71.184 0.0 0.0 0.0 0.0877392430750489 4.83960679249968 0.0877392430750489 0.0877392430750489 0 0.2742275032520141 0.8538719643217619 0.3494850021680094 1.2302046884880935 [YT]N{I|L}EN{I|L}{I|L}[QA];[YN]T{I|L}EN{I|L}{I|L}[QA];{[QN]|[E{I|L}]|[KN]}T[YN]N{I|L}{I|L}[QA];[YT]NV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}[QA];[YN]TV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}[QA];[YT]N{I|L}EGG{I|L}{I|L}[QA];[YT]GG{I|L}EN{I|L}{I|L}[QA];[YN]T{I|L}EGG{I|L}{I|L}[QA];[YN]VT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}[QA];{[CP]|[EA]}[YK]EN{I|L}{I|L}[QA] 4.6273;4.6199;4.1552;4.1237;4.1163;3.8491;3.8491;3.8416;3.7111;3.4363 -;-;-;-;-;-;-;-;-;- 2879 1 1.174 103963.3 1.0 7782 5468 13238 HBL1_DMSO_200M_050219_1,13252 HBL1_DMSO_200M_050219_1,13252,IERGFMNIQA False False KTFEDNLIEA 66.935752 590.29796141386 4726656.5 13238.0 nc|ENSG00000044459|Q9NXG0|CNTLN;;nc|ENSG00000044459|Q9NXG0-3|CNTLN;;ENSG00000044459|ENST00000380647|CNTLN 5.549385070800781 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13253 66.943 431.0 336140.0 25 0 19687.0 18570 LAAPPHSL 8 186 403.2324061877797 0 403.2325622439384 PEAK CID FTMS 0 0 0 13238 270660.75 1.0 0 0.0 15 Unmodified _LAAPPHSL_ ENST00000539365.1_1_12:7060613-7060682:+|nuORF;ENST00000540740.5_1_12:7060613-7061159:+|nuORF 10.183394434864962 0.5394990767616434 3 R 1 8 2.2185 0.0 0.0 0.27578 0.0 0.0 464.2742473347407 181.0511721246704 645.325419459411 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.27578 - 10 + 1 1.174 115456.0 1.0 7783 5468 13238 HBL1_DMSO_200M_050219_1,13253 HBL1_DMSO_200M_050219_1,13253,LAAPPHSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13254 66.949 312.0 241470.0 25 0 30157.0 + -1 QLCSESTGMSL 11 109 614.7619175703217 1227.5092822074432 2 614.7624999880791 MULTI CID FTMS 0 0 0 13238 261792.015625 1.0 0 0.0 16 Carbamidomethyl (C),Oxidation (M) _QLC(Carbamidomethyl (C))SESTGM(Oxidation (M))SL_ REV__ENST00000393804.2_1_21:32999667-32999880:-|nuORF 21.53697664764585 0.586507868110548 3 [TP]S{I|L}C{M(Oxidation (M))|F}C(Carbamidomethyl (C))C(Carbamidomethyl (C))Q{I|L} 10 -1 + 30.257 0.0 0.0 2.4649 2.4649 49.327 0.0 0.0 0.0 0.7538002569939515 10.079788405306616 0.7538002569939515 0.0 0 0.3054621874040891 0.0 0.7059771852360797 0.0 [TP]S{I|L}C{M(Oxidation (M))|F}C(Carbamidomethyl (C))C(Carbamidomethyl (C))Q{I|L};[TP]S{I|L}C{M(Oxidation (M))|F}C(Carbamidomethyl (C))C(Carbamidomethyl (C))K{I|L};{[TV]|[{I|L}S]}[TP]C{M(Oxidation (M))|F}C(Carbamidomethyl (C))C(Carbamidomethyl (C))Q{I|L};{[TV]|[{I|L}S]}[TP]C{M(Oxidation (M))|F}C(Carbamidomethyl (C))C(Carbamidomethyl (C))K{I|L};[Q{I|L}]{[MG]|[TS]}SMW[C(Carbamidomethyl (C))C]{I|L};[Q{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))K{I|L};[Q{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))Q{I|L};[TP]S{I|L}C{M(Oxidation (M))|F}C(Carbamidomethyl (C))C(Carbamidomethyl (C))[AG]{I|L};[TP]SCKMW[C(Carbamidomethyl (C))C]{I|L};{[TV]|[{I|L}S]}V{[C(Carbamidomethyl (C))G]|[NC]}MW[C(Carbamidomethyl (C))C]{I|L} 2.4649;2.4649;2.4035;2.4035;2.3531;2.0635;2.0635;1.7183;1.7161;1.6547 -;-;-;-;-;-;-;-;-;- 674 1 1.174 61096.0 1.0 7784 5468 13238 HBL1_DMSO_200M_050219_1,13254 HBL1_DMSO_200M_050219_1,13254,QLCSESTGMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13255 66.956 333.0 231230.0 25 0 20351.0 -1 FYPECEIRMM 10 67 704.2913421463905 1406.568131359581 2 704.2940551638603 MULTI CID FTMS 0 0 0 13238 247071.21875 0.9637990187906748 3 -0.2695388793945312 17 Carbamidomethyl (C),2 Oxidation (M) _FYPEC(Carbamidomethyl (C))EIRM(Oxidation (M))M(Oxidation (M))_ ENSG00000066923|ENST00000615138|STAG3;nc|ENSG00000292277|Q9UJ98-2|STAG3;nc|ENSG00000292277|Q9UJ98-3|STAG3;nc|ENSG00000292277|Q9UJ98|STAG3 8.155526934196011 0.6889124077178598 3 EP[YE] 4 -1 20.005 0.0 0.0 1.4223 0.0 0.0 870.3395136414107 0.0 870.3395136414107 0.0 8.895840698003 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 EP[YE] 1.4223 - 71 1 1.174 62436.9 1.0 7785 5468 13238 HBL1_DMSO_200M_050219_1,13255 HBL1_DMSO_200M_050219_1,13255,FYPECEIRMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13256 66.965 476.0 353720.0 25 0 33450.0 34341 SLSPIKDI 8 155 436.7579866225627 0 436.7576782107353 PEAK CID FTMS 0 0 0 13238 237259.46875 1.0 0 0.0 18 Unmodified _SLSPIKDI_ chr16:76309906-76316413|10|21.3|0.08|7.97|+|ENST00000478060|CNTNAP4,CNTNAP4;ENSG00000152910|ENST00000611870|CNTNAP4;nc|ENSG00000152910|Q9C0A0-2|CNTNAP4 36.04419817259434 0.1760516939127867 3 K{I|L}TT 4 7 14.458 0.0 0.0 1.659 0.0 0.0 246.1182548839942 179.0831240289672 425.2013789129615 0.0 0.0 0.0 0.0 0 0.1595680409956017 0.0 0.5941876774005248 0.0 K{I|L}TT 1.659 - 81 + 1 1.174 130331.3 1.0 7786 5468 13238 HBL1_DMSO_200M_050219_1,13256 HBL1_DMSO_200M_050219_1,13256,SLSPIKDI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13257 66.972 378.0 202900.0 25 0 21955.0 -1 0 97 578.2811498950149 1731.8216202852443 3 578.2825805544853 MULTI CID FTMS 0 0 0 13238 222188.40625 1.0 0 0.0 19 3 Q 1 -1 18.099 0.0 0.0 1.0451 0.0 0.0 1585.7522060780163 0.0 1585.7522060780163 0.0 4.286662482156343 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 Q 1.0451 - 118 + 1 1.174 61354.4 1.0 7787 5468 13238 HBL1_DMSO_200M_050219_1,13257 HBL1_DMSO_200M_050219_1,13257, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13258 66.981 520.0 68274.0 25 0 10083.0 -1 0 46 1182.160327136517 0 1182.160327136517 PEAK CID FTMS 0 0 0 -1 0 20 3 C(Carbamidomethyl (C))M 2 -1 6.4537 0.0 0.0 0.27319 0.0 0.0 1706.0764393298716 362.1339510553344 2068.210390385206 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))M 0.27319 - 6 + 1 1.174 34584.6 1.0 7788 5468 13238 HBL1_DMSO_200M_050219_1,13258 HBL1_DMSO_200M_050219_1,13258, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13260 66.985 67.0 794610.0 25 0 114220.0 + 36625 TASCMEYPCPR 11 58 629.2562475217233 1256.4979421102464 2 629.2567626833916 MULTI CID FTMS 0 0 0 13259 902356.3125 0.3518218942143862 1 -0.08447265625 1 Unmodified _TASCMEYPCPR_ REV__ENSG00000171815|ENST00000306549|PCDHB1 7.101721422024254 0.8416415510090076 3 TAV 3 -1 53.94 0.0 0.0 4.2929 0.0 0.0 0.0 982.321818115538 982.321818115538 48.4556125503638 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 TAV 4.2929 - 16 + 1 1.18 46297.4 1.0 7789 5469 13259 HBL1_DMSO_200M_050219_1,13260 HBL1_DMSO_200M_050219_1,13260,TASCMEYPCPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13261 66.986 30.0 1091200.0 25 0 133210.0 9008 FAYTVKYV 8 56 495.7687941290648 989.5230353249297 2 495.7689391970634 MULTI CID FTMS 0 0 0 13259 688930.0 0.3033882753838813 1 -0.08447265625 2 Unmodified _FAYTVKYV_ ENSG00000160087|ENST00000349431|UBE2J2;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2 10.183394434864962 0.7604730176254005 3 V 1 7 11.99 0.0 0.0 1.2117 0.0 0.0 872.4436189814711 0.0 872.4436189814711 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2117 + + 30 + 1 1.18 31257.2 1.0 7790 5469 13259 HBL1_DMSO_200M_050219_1,13261 HBL1_DMSO_200M_050219_1,13261,FAYTVKYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13262 66.988 34.0 1029500.0 25 0 70839.0 + 8177 EPRFKPTI 8 77 494.283846618593 986.553140303986 2 494.2827026247978 MULTI CID FTMS 0 0 0 13259 1777929.5 0.3082119642817054 -5 0.3890228271484375 3 Unmodified _EPRFKPTI_ REV__ENST00000533735.1_1_6:150322445-150326263:-|nuORF 5.230669730166228 0.792582437072536 3 H 1 -1 12.218 0.0 0.0 1.2385 0.0 0.0 831.4832988506641 0.0 831.4832988506641 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.2385 - 28 + 1 1.18 33406.4 1.0 7791 5469 13259 HBL1_DMSO_200M_050219_1,13262 HBL1_DMSO_200M_050219_1,13262,EPRFKPTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13263 66.989 20.0 2393000.0 25 0 265340.0 + 12992 HALRMLQSI 9 75 534.8022018123282 1067.5898506914564 2 534.8030273318291 MULTI CID FTMS 0 0 0 13259 1780549.125 0.2716841411485673 -2 0.11920166015625 4 Unmodified _HALRMLQSI_ ENSG00000185988|ENST00000454744|PLK5;nc|ENSG00000185988|Q496M5-2|PLK5 34.40172386719151 0.1061884637610825 3 HA{I|L} 3 6 43.416 0.0 0.0 4.0668 0.0 0.0 0.0 743.3883761041624 743.3883761041624 13.573324964312684 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + HA{I|L} 4.0668 + + 42 + 1 1.18 41042.2 1.0 7792 5469 13259 HBL1_DMSO_200M_050219_1,13263 HBL1_DMSO_200M_050219_1,13263,HALRMLQSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13264 66.99 44.0 1346100.0 25 0 104980.0 + 19726 LGPFMLVPV 9 87 486.7831341259952 971.5517153187903 2 486.7813293337822 MULTI CID FTMS 0 0 0 13259 972859.625 0.3211980351927677 -5 0.3890228271484375 5 Unmodified _LGPFMLVPV_ REV__ENST00000544440.6_1_13:77625173-77629724:-|nuORF 9.347437153973935 0.588369872918737 3 {[VA]|[{I|L}G]}P{M(Oxidation (M))|F} 4 -1 29.922 0.0 0.0 3.0798 0.0 0.0 0.0 554.2955416315061 554.2955416315061 18.327731244245346 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[VA]|[{I|L}G]}P{M(Oxidation (M))|F} 3.0798 + + 88 + 1 1.18 53454.2 1.0 7793 5469 13259 HBL1_DMSO_200M_050219_1,13264 HBL1_DMSO_200M_050219_1,13264,LGPFMLVPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13265 66.992 67.0 1230000.0 25 0 81908.0 + 41417 VPLDPMEHV 9 104 518.7601704892057 1035.5057880452114 2 518.7603637576103 MULTI CID FTMS 0 0 0 13259 902260.3125 0.7365309888963457 -2 0.11920166015625 6 Unmodified _VPLDPMEHV_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 57.47134341890925 0.0274820932774257 3 VP{I|L}D{NN|[MP]|[D{I|L}]|[EV]}EHV 9 0 + 63.934 0.0 0.0 6.1741 6.1741 90.514 0.0 0.0 0.0 38.2717301344963 8.846274332715382 8.846274332715382 15.28273777167044 0 1.0138793319624575 1.3010299956639813 0.6382104921644451 0.0 + + VP{I|L}D{NN|[MP]|[D{I|L}]|[EV]}EHV;VP{I|L}D{NN|[MP]|[D{I|L}]|[EV]}[HD]{I|L};[{I|L}P]D[NG]R{I|L}[HD];[VP]E[NG]R{I|L}[HD] 6.1741;4.6983;1.1978;1.0056 +;-;-;- + 272 + 1 1.18 70377.3 1.0 7794 5469 13259 HBL1_DMSO_200M_050219_1,13265 HBL1_DMSO_200M_050219_1,13265,VPLDPMEHV True True VPLDPMEHV 66.991625 518.76036375761 9663629.0 13259.0 nc|ENSG00000134644|Q14671|PUM1;;nc|ENSG00000134644|Q14671-4|PUM1;;nc|ENSG00000134644|Q14671-2|PUM1;;ENSG00000134644|ENST00000426105|PUM1 7.100005944569905 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13266 66.994 98.0 982900.0 25 0 208250.0 + 38893 TVLDIHDNQL 10 119 584.3036149162995 1166.5926768993988 2 584.3038207888603 MULTI CID FTMS 0 0 0 13259 884175.875 0.3197441524948554 -2 0.11920166015625 7 Unmodified _TVLDIHDNQL_ ENSG00000066557|ENST00000370952|LRRC40 76.82478488871298 0.0187167883027705 3 {[TV]|[{I|L}S]}{I|L}D{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S{I|L} 10 4 {[TV]|[{I|L}S]} + + 62.588 25.783 12.884 5.3651 5.3651 56.95 0.0 0.0 0.0 0.0 33.0943814136982 0.0 0.0 0 1.579689690656103 0.0 1.8441876774005248 0.0 {[TV]|[{I|L}S]}{I|L}D{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S{I|L} 5.3651 - 2576 + 1 1.18 75746.5 1.0 7795 5469 13259 HBL1_DMSO_200M_050219_1,13266 HBL1_DMSO_200M_050219_1,13266,TVLDIHDNQL True True TVLDIHDNQL 66.99376 584.30382078886 52505868.0 13259.0 ENSG00000066557|ENST00000370952|LRRC40 5.156711578369141 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13267 66.996 94.0 942040.0 25 0 116840.0 + 2792 ATTVPLAEEL 10 126 348.526046031335 1042.556308694205 3 348.5259277224541 MULTI CID FTMS 0 0 0 13259 740774.375 0.4018339325045628 1 -0.08447265625 8 Unmodified _ATTVPLAEEL_ REV__ENSG00000184897|ENST00000333762|H1-10 13.042465956692816 0.6287021003332052 3 [PA]A[WP]{M(Oxidation (M))|F}{I|L}E{I|L} 9 -1 + 34.548 0.0 0.0 3.3138 3.3138 78.594 0.0 0.0 0.0 4.348827550808537 19.85531242661758 4.348827550808537 9.03089986991944 0 0.4247425010840047 1.2218487496163564 0.0 0.0 [PA]A[WP]{M(Oxidation (M))|F}{I|L}E{I|L};[PA]A{I|L}[WM]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EAE{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}{M(Oxidation (M))|F}H[TA]{I|L};[VP]KR{[QC]|[C(Carbamidomethyl (C))A]}AE{I|L};[K{I|L}][W{M(Oxidation (M))|F}]HAE{I|L};[VP]K{[YD]|[{M(Oxidation (M))|F}M]}H[TA]{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}[KQ]AE{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}[DV]{I|L}E{I|L};[VP][VG][WM]{I|L}E{I|L} 3.3138;2.4476;2.1418;1.7601;1.5802;1.3878;1.3387;1.3025;1.3025;1.0137 -;-;-;-;-;-;-;-;-;- 566 1 1.18 77139.4 1.0 7796 5469 13259 HBL1_DMSO_200M_050219_1,13267 HBL1_DMSO_200M_050219_1,13267,ATTVPLAEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13268 66.998 80.0 1690000.0 25 0 268340.0 + 44600 YPFKPPKI 8 91 330.5321852651292 988.5747263955876 3 330.5319702029228 MULTI CID FTMS 0 0 0 13259 630680.8125 0.0360550603590477 17 -1.309234619140625 9 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 15.847184025352805 0.6768015514314958 3 Y{I|L}MKPPK{I|L} 8 2 + 40.448 0.0 0.0 4.0916 4.0916 71.831 0.0 0.0 0.0 16.409780573583323 1.4266750356873104 1.4266750356873104 1.4266750356873104 0 0.0 0.0 0.0 0.2134679910804404 Y{I|L}MKPPK{I|L};Y{I|L}MKPP{I|L}K;YP{M(Oxidation (M))|F}KPPK{I|L};YP{M(Oxidation (M))|F}KPP{I|L}K;Y{I|L}P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PK{I|L};Y{I|L}P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}P{I|L}K;YP{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PK{I|L};YP{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}P{I|L}K 4.0916;3.9472;3.9134;3.7691;2.1948;2.0505;2.0167;1.8724 -;-;+;-;-;-;-;- + 208 + 1 1.18 111112.8 1.0 7797 5469 13259 HBL1_DMSO_200M_050219_1,13268 HBL1_DMSO_200M_050219_1,13268,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13269 67.004 347.0 457350.0 25 0 50703.0 -1 PYLMPCEIGL 10 165 604.7856039046939 1207.5566548761876 2 604.7863647341728 MULTI CID FTMS 0 0 0 13259 516571.75 0.1364177913739417 -5 0.3890228271484375 10 Carbamidomethyl (C),Oxidation (M) _PYLM(Oxidation (M))PC(Carbamidomethyl (C))EIGL_ ENSG00000181544|ENST00000650831|FANCB 21.74664581756881 0.480091245866545 3 AVQS{I|L}{I|L}AV 8 -1 51.672 0.0 0.0 4.2791 0.0 0.0 408.0778370587906 0.0 408.0778370587906 0.0 28.62556123365665 0.0 0.0 0 0.8913577739914502 0.0 1.055462187404089 0.5484550065040282 AVQS{I|L}{I|L}AV 4.2791 - 3058 1 1.18 119010.1 1.0 7798 5469 13259 HBL1_DMSO_200M_050219_1,13269 HBL1_DMSO_200M_050219_1,13269,PYLMPCEIGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13270 67.006 101.0 1630400.0 25 0 249440.0 + 15282 IPIHIVPHV 9 146 342.2149059405144 1023.6228884217433 3 342.2147094607353 MULTI CID FTMS 0 0 0 13259 483079.78125 0.8486652528973706 -1 0.09185791015625 11 Unmodified _IPIHIVPHV_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-4|BRCC3;nc|ENSG00000185515|P46736|BRCC3 56.04830969593885 0.0282699710924866 3 {I|L}P{I|L}H{I|L}VPHV 9 0 + 72.591 0.0 0.0 7.0916 7.0916 93.349 0.0 0.0 0.0 46.762137858390815 10.412800692342117 10.412800692342117 15.758884703078737 0 0.75 2.0 0.0 0.0 + + {I|L}P{I|L}H{I|L}VPHV;{I|L}P{I|L}VH{I|L}PHV;{I|L}P{I|L}H{I|L}V[HV]P;{I|L}P{I|L}H{I|L}YR{I|L};{I|L}P{I|L}HY{I|L}R{I|L};{I|L}PHY{I|L}{I|L}R{I|L};{I|L}P{I|L}VH{I|L}[HV]P;{I|L}P{I|L}V[WQ]R{I|L};[HA]SSK{I|L}{I|L}R{I|L};{I|L}P[KQ][RN]R{I|L} 7.0916;5.5521;5.1774;5.1641;4.9921;3.822;3.6379;3.4109;1.9889;1.7304 +;-;-;-;-;-;-;-;-;- + 723 + 1 1.18 139706.9 1.0 7799 5469 13259 HBL1_DMSO_200M_050219_1,13270 HBL1_DMSO_200M_050219_1,13270,IPIHIVPHV True True IPIHIVPHV 67.006068 342.214709460735 6381051.625 13259.0 nc|ENSG00000185515|P46736-4|BRCC3;;nc|ENSG00000185515|P46736-3|BRCC3;;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;;ENSG00000185515|ENST00000330045|BRCC3;;nc|ENSG00000185515|P46736|BRCC3 4.700935204823812 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13271 67.008 73.0 813640.0 25 0 63601.0 + 42504 VTLAASHRG 9 88 456.2569667334189 0 456.2565185427666 PEAK CID FTMS 0 0 0 13259 476122.5 0.2318955954156149 -8 0.6419830322265625 12 Unmodified _VTLAASHRG_ REV__ENST00000291574.8_1_21:45523422-45523842:+|nuORF 7.910154910731844 0.3362437653303669 3 DK 2 -1 10.261 0.0 0.0 1.1269 0.0 0.0 290.17078778618355 374.1896761529906 664.3604639391742 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 DK 1.1269 - 47 + 1 1.18 52420.2 1.0 7800 5469 13259 HBL1_DMSO_200M_050219_1,13271 HBL1_DMSO_200M_050219_1,13271,VTLAASHRG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13272 67.01 80.0 1132400.0 25 0 81185.0 + 38885 TVKTLHEVE 9 128 528.290055908094 1054.565558882988 2 528.2911254763603 MULTI CID FTMS 0 0 0 13259 459334.375 0.0135315455256327 17 -1.309234619140625 13 Unmodified _TVKTLHEVE_ REV__ENSG00000174306|ENST00000683867|ZHX3;REV__nc|ENSG00000174306|Q9H4I2-2|ZHX3 24.020572477871973 0.2255576514309169 3 {[QN]|[E{I|L}]|[KN]}[RP]A{I|L}EEV 9 -1 + 49.6 0.0 0.0 4.7034 4.7034 77.018 0.0 0.0 0.0 2.719710455794804 29.260238727180223 2.719710455794804 3.357921019231931 0 0.8921590589602533 1.2218487496163564 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[RP]A{I|L}EEV;[R{I|L}][EP]A{I|L}EEV;[EP][R{I|L}]A{I|L}EEV;[VP][W{I|L}]A{I|L}EEV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]{I|L}EEV;[EP]A[R{I|L}]{I|L}EEV;{[QN]|[E{I|L}]|[KN]}[RP]A{I|L}TQQ;[R{I|L}][EP]A{I|L}TQQ;HHT{I|L}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[EP][R{I|L}]A{I|L}TQQ 4.7034;4.385;3.6051;3.4604;3.402;2.7488;2.202;1.8836;1.682;1.1038 -;-;-;-;-;-;-;-;-;- 729 1 1.18 75633.0 1.0 7801 5469 13259 HBL1_DMSO_200M_050219_1,13272 HBL1_DMSO_200M_050219_1,13272,TVKTLHEVE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13273 67.012 90.0 1087300.0 25 0 105010.0 + 3960 DALNRPLNI 9 133 513.2901212752786 1024.565689617357 2 513.2889282107353 MULTI CID FTMS 0 0 0 13259 275280.53125 0.0980516008554565 4 -0.3442306518554687 14 Unmodified _DALNRPLNI_ ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2 34.40172386719151 0.1061884637610825 3 {[DA]|[EG]}{I|L}NR[{I|L}P]QV 9 2 + 37.963 0.0 0.0 3.7053 3.7053 70.05 0.0 0.0 0.0 9.458180928545469 0.9691001300805624 0.9691001300805624 0.9691001300805624 0 0.8494850021680094 1.0457574905606752 0.0 0.8252574989159953 {[DA]|[EG]}{I|L}NR[{I|L}P]QV;{[DA]|[EG]}{I|L}NR[{I|L}P]N{I|L};{[DA]|[EG]}{I|L}NR[Q{I|L}]PV;{[DA]|[EG]}{I|L}GGR[{I|L}P]QV;{[DA]|[EG]}{I|L}GGR[{I|L}P]N{I|L};{[DA]|[EG]}{I|L}[KT]{[QN]|[E{I|L}]|[KN]}HV;{[DA]|[EG]}{I|L}NR[{I|L}P][AG]V;{[DA]|[EG]}{I|L}NR[{I|L}P]GG{I|L};{[DA]|[EG]}{I|L}GGR[Q{I|L}]PV;[{I|L}A]DG[QP]VVQV 3.7053;3.6107;2.8659;2.8066;2.712;2.4238;2.3185;2.224;1.9672;0.79003 -;+;-;-;-;-;-;-;-;- + 431 + 1 1.18 80398.9 1.0 7802 5469 13259 HBL1_DMSO_200M_050219_1,13273 HBL1_DMSO_200M_050219_1,13273,DALNRPLNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13274 67.019 437.0 484920.0 25 0 84953.0 + 36329 SYNDYVREF 9 173 596.7670314957832 1191.5195100583662 2 596.7678100466728 MULTI CID FTMS 0 0 0 13259 293263.375 0.0761332547675708 -5 0.3890228271484375 15 Unmodified _SYNDYVREF_ ENSG00000083896|ENST00000344157|YTHDC1;nc|ENSG00000083896|Q96MU7-2|YTHDC1 107.09958533191995 0.0072323465566536 3 {[{M(Oxidation (M))|F}C]|[YS]}NDYVRE{M(Oxidation (M))|F} 9 0 {[{M(Oxidation (M))|F}C]|[YS]} + + 70.181 4.9608 1.9836 5.89 5.89 58.73 0.0 0.0 0.0 0.0 35.7608530922493 0.0 0.0 0 1.8667053245199623 0.0 0.819341519366547 1.4604093769761874 + + {[{M(Oxidation (M))|F}C]|[YS]}NDYVRE{M(Oxidation (M))|F} 5.89 + + 3243 + 1 1.18 157005.4 1.0 7803 5469 13259 HBL1_DMSO_200M_050219_1,13274 HBL1_DMSO_200M_050219_1,13274,SYNDYVREF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13275 67.029 538.0 373400.0 25 0 35784.0 + 21768 LPNAPKALI 9 170 468.7971129212361 935.5796729092722 2 468.7975341677666 MULTI CID FTMS 0 0 0 13259 271140.15625 0.084672583683377 -5 0.3890228271484375 16 Unmodified _LPNAPKALI_ ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 68.08070601005525 0.0218408846571049 3 {I|L}PNA 4 5 56.402 0.0 0.0 6.0286 0.0 0.0 0.0 537.341386201109 537.341386201109 21.451111464612826 0.0 0.0 0.0 0 1.048455006504028 1.6989700043360187 0.0 0.0 + {I|L}PNA 6.0286 + + 2483 + 1 1.18 154753.3 1.0 7804 5469 13259 HBL1_DMSO_200M_050219_1,13275 HBL1_DMSO_200M_050219_1,13275,LPNAPKALI True True LPNAPKALI 67.028829 468.797534167767 33235192.0 13259.0 nc|ENSG00000079785|Q92499-2|DDX1;;nc|ENSG00000079785|Q92499-3|DDX1;;ENSG00000079785|ENST00000233084|DDX1 5.6687517166137695 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13276 67.037 462.0 205450.0 25 0 32612.0 + 40527 VIWEHDYTSV 10 124 624.7986856581883 1247.5828183831766 2 624.7985107302666 MULTI CID FTMS 0 0 0 13259 235764.015625 0.9479436600110168 1 -0.08447265625 17 Unmodified _VIWEHDYTSV_ ENSG00000173409|ENST00000310256|ARV1 36.12702656103203 0.1984647928738587 3 {[YC]|[HE]}WD{I|L}VYG{I|L} 9 8 31.825 0.0 0.0 2.5509 0.0 0.0 0.0 132.07314976428907 132.07314976428907 -1.2958027031972783 0.0 -1.2958027031972783 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[YC]|[HE]}WD{I|L}VYG{I|L} 2.5509 - 943 1 1.18 76670.6 1.0 7805 5469 13259 HBL1_DMSO_200M_050219_1,13276 HBL1_DMSO_200M_050219_1,13276,VIWEHDYTSV False True VIWEHDYTSV 67.037049 624.798510730267 2421913.0 13259.0 ENSG00000173409|ENST00000310256|ARV1 8.20620091756185 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13277 67.041 183.0 292810.0 25 0 45132.0 + 10334 FSELYNESL 9 89 551.2595830812745 0 551.2614623904228 PEAK CID FTMS 0 0 0 13259 203337.578125 0.5867500742139186 1 -0.08447265625 18 Unmodified _FSELYNESL_ REV__ENST00000470763.1_1_1:5936963-5940792:-|nuORF 12.531546534597751 0.2832320739326029 3 E{M(Oxidation (M))|F}T 3 -1 15.177 0.0 0.0 1.3791 0.0 0.0 343.1946289537614 377.1237887018188 720.3184176555802 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E{M(Oxidation (M))|F}T 1.3791 - 73 + 1 1.18 46196.5 1.0 7806 5469 13259 HBL1_DMSO_200M_050219_1,13277 HBL1_DMSO_200M_050219_1,13277,FSELYNESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13278 67.051 569.0 149360.0 25 0 5660.9 -1 0 111 911.419887328786 0 911.4196044802666 PEAK CID FTMS 0 0 0 13259 158100.296875 0.4738284540420417 1 -0.08447265625 19 3 {I|L}NA 3 -1 14.693 0.0 0.0 0.80693 0.0 0.0 457.1630645972217 1062.4723604791627 1519.6354250763843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}NA 0.80693 - 304 + 1 1.18 60486.9 1.0 7807 5469 13259 HBL1_DMSO_200M_050219_1,13278 HBL1_DMSO_200M_050219_1,13278, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13279 67.065 779.0 407580.0 25 0 32482.0 + 21431 LPHAGDRILI 10 277 368.8896386997236 1103.647086699371 3 368.8889953494072 MULTI CID FTMS 0 0 0 13259 156070.59375 0.8108531465079962 -1 0.09185791015625 20 Unmodified _LPHAGDRILI_ ENSG00000142784|ENST00000319394|WDTC1;nc|ENSG00000142784|Q8N5D0-2|WDTC1;nc|ENSG00000142784|Q8N5D0-3|WDTC1;nc|ENSG00000142784|Q8N5D0-4|WDTC1;nc|ENSG00000142784|Q8N5D0-5|WDTC1;nc|ENSG00000142784|Q8N5D0-6|WDTC1 19.61532865858139 0.5184158481991699 3 {I|L}PHAGDR{I|L}{I|L}{I|L} 10 0 + 57.634 0.0 0.0 5.2222 5.2222 76.034 0.0 0.0 0.0 31.698808503185187 7.179250024847264 7.179250024847264 1.7609125905568137 0 1.2786596949921218 1.0457574905606752 0.4247425010840047 0.0 + + {I|L}PHAGDR{I|L}{I|L}{I|L};{I|L}PHAGRD{I|L}{I|L}{I|L};{I|L}PHQDR{I|L}{I|L}{I|L};{I|L}PHQRD{I|L}{I|L}{I|L};[HV]YHP{I|L}{I|L}{I|L}{I|L};[HV]YH{I|L}P{I|L}{I|L}{I|L};[{I|L}P][YE]M{I|L}{I|L}{I|L}{I|L};[HV]YH{I|L}{I|L}P{I|L}{I|L};[HA]P[KC]P{I|L}{I|L}{I|L}{I|L};[HA]P[KC]{I|L}P{I|L}{I|L}{I|L} 5.2222;5.0626;4.6303;4.4707;3.1253;2.693;2.5442;2.4202;2.4164;1.9841 +;-;-;-;-;-;-;-;-;- + 624 + 1 1.18 249391.8 1.0 7808 5469 13259 HBL1_DMSO_200M_050219_1,13279 HBL1_DMSO_200M_050219_1,13279,LPHAGDRILI False True LPHAGDRILI 67.06522 368.888995349407 1862391.625 13259.0 nc|ENSG00000142784|Q8N5D0-6|WDTC1;;ENSG00000142784|ENST00000319394|WDTC1;;nc|ENSG00000142784|Q8N5D0-3|WDTC1;;nc|ENSG00000142784|Q8N5D0-2|WDTC1;;nc|ENSG00000142784|Q8N5D0-4|WDTC1;;nc|ENSG00000142784|Q8N5D0-5|WDTC1 4.945674419403076 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13281 67.07 4.0 10381000.0 25 0 1399000.0 + 32361 RYPTSIASL 9 61 504.27971494636216 1006.5448769595243 2 504.2797729372978 MULTI CID FTMS 0 0 0 13280 13676388.0 0.262806859041364 -4 0.3370361328125 1 Unmodified _RYPTSIASL_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 31.26834338654808 0.1333407332142048 3 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 5 + 62.369 0.0 0.0 6.1963 6.1963 81.326 0.0 0.0 0.0 3.0102999566398125 16.478174818886373 3.0102999566398125 3.0102999566398125 0 0.9247425010840048 1.3979400086720375 0.4247425010840047 0.0 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 6.1963;5.8973 -;- 71 1 1.186 43582.2 1.0 7809 5470 13280 HBL1_DMSO_200M_050219_1,13281 HBL1_DMSO_200M_050219_1,13281,RYPTSIASL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13282 67.071 60.0 1091900.0 25 0 195460.0 + 22734 LQKAVKFKW 9 70 574.3506972423263 1146.6868415514523 2 574.3511230349541 MULTI CID FTMS 0 0 0 13280 759662.5625 0.327841411578525 2 -0.1363143920898437 2 Unmodified _LQKAVKFKW_ REV__ENSG00000162434|ENST00000342505|JAK1 3.944395688203298 0.7769873103969335 3 {I|L}D 2 -1 20.969 0.0 0.0 1.8287 0.0 0.0 0.0 915.5567355931994 915.5567355931994 9.54911684825456 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D 1.8287 - 9 + 1 1.186 54304.4 1.0 7810 5470 13280 HBL1_DMSO_200M_050219_1,13282 HBL1_DMSO_200M_050219_1,13282,LQKAVKFKW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13283 67.072 21.0 2101100.0 25 0 288150.0 22452 LPVAQVIF 8 61 443.7734746181057 885.5323963030114 2 443.7735778689384 MULTI CID FTMS 0 0 0 13280 2263941.75 0.074150068993436 -16 1.3212356567382812 3 Unmodified _LPVAQVIF_ ENST00000254322.2_1_19:14625909-14626227:-|nuORF 19.438996006549623 0.6237395211498085 3 {I|L}P 2 6 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3722655346107 672.3722655346107 18.8290875765496 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 97 + 1 1.186 43466.6 1.0 7811 5470 13280 HBL1_DMSO_200M_050219_1,13283 HBL1_DMSO_200M_050219_1,13283,LPVAQVIF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13284 67.073 28.0 2572600.0 25 0 260660.0 + 16537 KAVKDLVVL 9 91 492.82634729929134 983.6381416653828 2 492.8264037966728 MULTI CID FTMS 0 0 0 13280 2246225.25 0.6676289496613371 -1 0.08447265625 4 Unmodified _KAVKDLVVL_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 38.17557092003332 0.0854718145212029 3 [{I|L}V]DKVAKV{I|L} 9 6 + 56.569 0.0 0.0 5.751 5.751 77.859 0.0 0.0 0.0 2.340832060333682 14.09256854528806 2.340832060333682 1.7609125905568137 0 0.8494850021680094 1.5228787452803376 0.0 0.3494850021680094 [{I|L}V]DKVAKV{I|L};[{I|L}V]T{I|L}QAKV{I|L};VVEKVAKV{I|L};[{I|L}V]DKAKVV{I|L};[{I|L}V]TAAVAKV{I|L};VVEKAKVV{I|L};[{I|L}V]DKAVKV{I|L};VVEKAVKV{I|L};[{I|L}V]T{I|L}[AG]AKV{I|L};[{I|L}V]TAAAKVV{I|L} 5.751;5.572;5.5131;5.1979;5.1209;4.9599;4.8919;4.6539;4.6359;4.5678 -;-;-;-;-;-;-;-;-;- 1248 1 1.186 61052.2 1.0 7812 5470 13280 HBL1_DMSO_200M_050219_1,13284 HBL1_DMSO_200M_050219_1,13284,KAVKDLVVL True True KAVKDLVVL 67.073355 492.826403796673 23161358.0 13280.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 3.717365980148315 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13285 67.075 29.0 1744400.0 25 0 194090.0 + -1 PSLLCLWEC 9 77 560.7601885995599 1119.5058242659195 2 560.7599975466728 MULTI CID FTMS 0 0 0 13280 1269590.75 1.0 0 0.0 5 Carbamidomethyl (C) _PSLLC(Carbamidomethyl (C))LWEC_ REV__ENSG00000123384|ENST00000243077|LRP1;REV__ENST00000556356.1_1_12:57602422-57606335:+|nuORF 3.944395688203298 0.7769873103969335 3 V 1 -1 12.474 0.0 0.0 1.1143 0.0 0.0 1002.4264002930666 0.0 1002.4264002930666 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1143 - 38 + 1 1.186 45559.0 1.0 7813 5470 13280 HBL1_DMSO_200M_050219_1,13285 HBL1_DMSO_200M_050219_1,13285,PSLLCLWEC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13286 67.076 89.0 1896400.0 25 0 213930.0 + 40138 VGLSDVEL 8 143 416.2266014676928 830.4386500021856 2 416.2265197634697 MULTI CID FTMS 0 0 0 13280 1061053.0 0.0769506188812446 -4 0.3370361328125 6 Unmodified _VGLSDVEL_ ENSG00000170153|ENST00000515673|RNF150;nc|ENSG00000170153|Q9ULK6-2|RNF150;nc|ENSG00000170153|Q9ULK6-4|RNF150 74.39630413441286 0.1057069479668299 3 DD{I|L}KVE{I|L} 7 4 + 72.903 0.0 0.0 8.7789 8.7789 96.985 0.0 0.0 0.0 10.810384486277798 10.810384486277798 10.810384486277798 19.120768972555595 0 1.829689690656103 1.6989700043360187 1.0941876774005248 0.0 DD{I|L}KVE{I|L};DD{I|L}K{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}KDVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}DKVE{I|L};[TA][{I|L}A]DVE{I|L};[K{I|L}]DDVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}KD{I|L}D{I|L};DD{I|L}K{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}KVDE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}DD{I|L} 8.7789;6.4764;6.2253;5.6708;5.4642;5.2331;5.2245;5.1578;5.0942;4.8185 -;-;-;-;-;-;-;-;-;- 927 + 1 1.186 133387.2 1.0 7814 5470 13280 HBL1_DMSO_200M_050219_1,13286 HBL1_DMSO_200M_050219_1,13286,VGLSDVEL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13287 67.078 24.0 749670.0 25 0 49234.0 26479 NTLYRFFI 8 50 537.2942810826698 1072.5740092321396 2 537.2955810427666 MULTI CID FTMS 0 0 0 13280 939425.625 0.6521797989277058 -7 0.5040130615234375 7 Unmodified _NTLYRFFI_ ENST00000460138.5_1_6:7883179-7883239:-|nuORF 8.593279151180031 0.7721714526254883 3 {I|L} 1 7 13.495 0.0 0.0 1.2582 0.0 0.0 941.4789450004974 0.0 941.4789450004974 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2582 + + 6 + 1 1.186 23484.9 1.0 7815 5470 13280 HBL1_DMSO_200M_050219_1,13287 HBL1_DMSO_200M_050219_1,13287,NTLYRFFI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13288 67.079 51.0 1293200.0 25 0 211490.0 + 21905 LPPHIIRL 8 62 320.21154587615865 957.612808228676 3 320.2112304568291 MULTI CID FTMS 0 0 0 13280 818586.5 0.0450890217162356 -4 0.3370361328125 8 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 22.736283301280096 0.5659792798204337 3 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 0 + 63.365 0.0 0.0 6.617 6.617 82.665 0.0 0.0 0.0 52.39577516576787 5.484550065040281 5.484550065040281 3.0102999566398125 0 0.0 1.5228787452803376 0.0 0.0 + + {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 6.617;6.3026;5.9883;4.0836 +;-;-;- + 82 + 1 1.186 61654.8 1.0 7816 5470 13280 HBL1_DMSO_200M_050219_1,13288 HBL1_DMSO_200M_050219_1,13288,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13289 67.08 49.0 1009900.0 25 0 152140.0 10386 FSSPHLVQV 9 87 507.2745740143984 1012.5345950955968 2 507.2744018435478 MULTI CID FTMS 0 0 0 13280 688301.4375 0.3496846976431387 2 -0.1363143920898437 9 Unmodified _FSSPHLVQV_ ENSG00000136877|ENST00000373247|FPGS;ENST00000488307.5_1_9:130565203-130570042:+|nuORF;nc|ENSG00000136877|Q05932-2|FPGS;nc|ENSG00000136877|Q05932-3|FPGS;nc|ENSG00000136877|Q05932-4|FPGS 39.957323273325 0.0756908302845263 3 SDS{I|L}V{M(Oxidation (M))|F}QV 8 5 36.029 0.0 0.0 3.5583 0.0 0.0 119.07396895576328 0.0 119.07396895576328 0.0 19.496752878615528 0.0 0.0 0 0.8321296499783923 0.0 0.531234684152075 0.0 SDS{I|L}V{M(Oxidation (M))|F}QV 3.5583 - 412 1 1.186 44944.3 1.0 7817 5470 13280 HBL1_DMSO_200M_050219_1,13289 HBL1_DMSO_200M_050219_1,13289,FSSPHLVQV True True HPSSLVFLL 67.080291 507.274401843548 3658826.5 13280.0 ENST00000451229.1_1_9:131963759-131971282:+|nuORF -0.3824724952379862 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13290 67.082 47.0 2021100.0 25 0 209550.0 29165 QFVARAAIFV 10 102 374.5535978933871 1120.6389642803613 3 374.5533935427666 MULTI CID FTMS 0 0 0 13280 665693.625 0.8125691566203294 2 -0.1363143920898437 10 Unmodified _QFVARAAIFV_ ENSG00000188691|ENST00000532411|OR56A5 5.783430956126388 0.6998847395148697 3 YKV{M(Oxidation (M))|F} 4 8 19.737 0.0 0.0 1.7612 0.0 0.0 565.3327503888687 0.0 565.3327503888687 0.0 4.252509456924827 0.0 0.0 0 0.5924778212679485 0.0 0.0 0.0 YKV{M(Oxidation (M))|F} 1.7612 - 59 1 1.186 82761.2 1.0 7818 5470 13280 HBL1_DMSO_200M_050219_1,13290 HBL1_DMSO_200M_050219_1,13290,QFVARAAIFV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13291 67.084 100.0 921980.0 25 0 147990.0 + 41847 VPYLFKKV 8 104 331.87596361904207 992.6060614573262 3 331.8758422732353 MULTI CID FTMS 0 0 0 13280 625585.5625 0.1193691193586127 -4 0.3370361328125 11 Unmodified _VPYLFKKV_ ENSG00000100395|ENST00000216237|L3MBTL2;ENST00000466589.5_1_22:41601366-41623356:+|nuORF;ENST00000479978.5_1_22:41615341-41623356:+|nuORF;nc|ENSG00000100395|Q969R5-2|L3MBTL2;nc|ENSG00000100395|Q969R5-3|L3MBTL2 21.74664581756881 0.5868176546531598 3 VPY{I|L}{M(Oxidation (M))|F}KVK 8 2 + 52.52 0.0 0.0 5.2912 5.2912 73.702 0.0 0.0 0.0 22.09614293199344 0.2802872360024366 0.2802872360024366 0.2802872360024366 0 0.0 0.5686362358410126 0.0 0.25 VPY{I|L}{M(Oxidation (M))|F}KVK;VPY{I|L}{M(Oxidation (M))|F}KKV 5.2912;5.2629 -;+ + 141 + 1 1.186 79076.9 1.0 7819 5470 13280 HBL1_DMSO_200M_050219_1,13291 HBL1_DMSO_200M_050219_1,13291,VPYLFKKV False True VPYLFKKV 67.083695 331.875842273235 113794775.0 13280.0 nc|ENSG00000100395|Q969R5-2|L3MBTL2;;nc|ENSG00000100395|Q969R5-3|L3MBTL2;;ENST00000466589.5_1_22:41601366-41623356:+|nuORF;;ENST00000479978.5_1_22:41615341-41623356:+|nuORF;;ENSG00000100395|ENST00000216237|L3MBTL2 5.872793038686116 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13292 67.088 206.0 1143800.0 25 0 75910.0 + 22350 LPSPLKQTI 9 191 498.8081050507611 995.6016571683224 2 498.8083373904228 MULTI CID FTMS 0 0 0 13280 585570.0625 0.359809819789415 -4 0.3370361328125 12 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 61.60191391372663 0.0251951588191061 3 {I|L}PSP{I|L}[KQ]T{I|L} 9 0 + 71.423 0.0 0.0 7.1738 7.1738 81.725 0.0 0.0 0.0 20.83954126026456 0.7775405595678961 0.7775405595678961 1.5051499783199065 0 1.5044321917401078 1.5228787452803376 1.3737125054200234 0.0 + + {I|L}PSP{I|L}[KQ]T{I|L};{I|L}PS{I|L}P[KQ]T{I|L};{I|L}PSAAK{I|L}PS{I|L};{I|L}PSAAK{I|L}TPV;{I|L}TPQK{I|L}PS{I|L};{I|L}PSAAK{I|L}TVP;{I|L}PTQK{I|L}PS{I|L};{I|L}PSAAK{I|L}PTV;{I|L}PTQK{I|L}TPV;{I|L}T{I|L}TT[HV]V{I|L} 7.1738;7.0227;7.0144;6.875;6.6895;6.2233;6.1276;6.0211;5.9882;5.9539 +;-;-;-;-;-;-;-;-;- + 5839 + 1 1.186 177987.9 1.0 7820 5470 13280 HBL1_DMSO_200M_050219_1,13292 HBL1_DMSO_200M_050219_1,13292,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13293 67.09 86.0 831790.0 25 0 50685.0 + 39475 VAQPLGDPEV 10 108 512.7690386614263 1023.5235243896526 2 512.7687255740166 MULTI CID FTMS 0 0 0 13280 454686.0 0.070077794603782 -4 0.3370361328125 13 Unmodified _VAQPLGDPEV_ REV__ENST00000290902.9_1_4:1165264-1165758:-|nuORF;REV__ENST00000512888.1_1_4:1165638-1165758:-|nuORF 19.256988751693697 0.5244284437930726 3 {[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]QQPHV 9 -1 + 41.55 0.0 0.0 4.0595 4.0595 81.389 0.0 0.0 0.0 23.13363730737705 5.837442047422741 5.837442047422741 9.208187539523747 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]QQPHV;{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V][AG]QPHV;{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]Q[AG]PHV;{[VA]|[{I|L}G]}[YQ]Q{M(Oxidation (M))|F}[R{I|L}];{[VA]|[{I|L}G]}[QP]T[HC][R{I|L}];{[VA]|[{I|L}G]}A[YG]Q{M(Oxidation (M))|F}[R{I|L}];{[VA]|[{I|L}G]}AP[HN]{M(Oxidation (M))|F}[R{I|L}];[{I|L}P]QGT[HC][R{I|L}];{[VA]|[{I|L}G]}APGT[HC][R{I|L}];[{I|L}P][HN]Q{M(Oxidation (M))|F}[R{I|L}] 4.0595;3.1599;3.1599;1.8065;1.4555;1.3511;1.2944;1.2455;1.1724;0.94098 -;-;-;-;-;-;-;-;-;- 393 + 1 1.186 62008.9 1.0 7821 5470 13280 HBL1_DMSO_200M_050219_1,13293 HBL1_DMSO_200M_050219_1,13293,VAQPLGDPEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13294 67.094 215.0 488670.0 25 0 72186.0 + 14598 IIDQHTFEV 9 142 551.2821020627462 1100.5496511922922 2 551.2835571169853 MULTI CID FTMS 0 0 0 13280 208422.59375 0.3036355191737463 -1 0.08447265625 14 Unmodified _IIDQHTFEV_ ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1 34.40172386719151 0.1061884637610825 3 {I|L}{I|L}[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}T 6 6 56.956 0.0 0.0 5.1752 0.0 0.0 0.0 377.1224764459594 377.1224764459594 31.86986640468681 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.8807196863200843 0.0 {I|L}{I|L}[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}T 5.1752 - 2487 + 1 1.186 84487.3 1.0 7822 5470 13280 HBL1_DMSO_200M_050219_1,13294 HBL1_DMSO_200M_050219_1,13294,IIDQHTFEV True True IIDQHTFEV 67.093616 551.283557116985 5215045.0 13280.0 ENSG00000167986|ENST00000301764|DDB1;;nc|ENSG00000167986|Q16531-2|DDB1 3.974654674530029 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13295 67.103 551.0 183600.0 25 0 15929.0 -1 0 112 917.431509586288 1832.848466239376 2 917.4318725466728 MULTI CID FTMS 0 0 0 13280 208481.171875 0.0547316027287152 10 -0.810577392578125 15 3 [MN][NP]{I|L}NEAQ[Y{M(Oxidation (M))|F}]TP 13 -1 54.333 0.0 0.0 2.9644 0.0 0.0 0.0 310.1782320611938 310.1782320611938 40.53074181297308 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.4247425010840047 [MN][NP]{I|L}NEAQ[Y{M(Oxidation (M))|F}]TP 2.9644 - 819 + 1 1.186 69919.1 1.0 7823 5470 13280 HBL1_DMSO_200M_050219_1,13295 HBL1_DMSO_200M_050219_1,13295, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13296 67.113 576.0 506730.0 25 0 36640.0 9362 FINSRIITV 9 260 531.8178873139341 1061.621221694668 2 531.8188354372978 MULTI CID FTMS 0 0 0 13280 156709.65625 0.404633161204313 -3 0.20367431640625 16 Unmodified _FINSRIITV_ ENSG00000037474|ENST00000264670|NSUN2;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 12.531546534597751 0.4974689918368763 3 {[TV]|[{I|L}S]}T[VP]VVY[KG] 10 9 + 28.849 0.0 0.0 2.7175 2.7175 71.71 0.0 0.0 0.0 3.018747731276669 5.764837301042718 3.018747731276669 3.018747731276669 0 0.2742275032520141 1.154901959985743 0.3343105420796065 0.0 {[TV]|[{I|L}S]}T[VP]VVY[KG];{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]VVY[KG];[{I|L}T]S[VP]VVY[KG];[PS]V[{I|L}T]VVY[KG];[{I|L}V]{[RE]|[WV]}VVY[KG];[VS]P[{I|L}T]VVY[KG];{[VA]|[{I|L}G]}A[KQ]VVY[KG];[VP]S[{I|L}T]VVY[KG] 2.7175;2.4331;2.1058;1.4733;1.4606;1.1829;0.82254;0.72278 -;-;-;-;-;-;-;- 1741 1 1.186 224250.0 1.0 7824 5470 13280 HBL1_DMSO_200M_050219_1,13296 HBL1_DMSO_200M_050219_1,13296,FINSRIITV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13297 67.123 572.0 220990.0 25 0 8299.7 + 13950 HYMSPYQLNAY 11 139 693.8108750180361 1385.607197102872 2 693.8129760622978 MULTI CID FTMS 0 0 0 13280 175083.390625 0.5103370081350874 -1 0.08447265625 17 Unmodified _HYMSPYQLNAY_ ENSG00000124772|ENST00000244751|CPNE5;nc|ENSG00000124772|Q9HCH3-2|CPNE5 79.59630418116434 0.0079568537026334 3 {[WN]|[YH]}MSPYQ{I|L}NAY 11 0 + 104.34 0.0 0.0 7.5304 7.5304 90.041 0.0 0.0 0.0 7.1902979826498665 10.0 7.1902979826498665 7.1902979826498665 0 0.8494850021680094 1.3010299956639813 1.4802046884880935 0.7302046884880937 + + {[WN]|[YH]}MSPYQ{I|L}NAY;{[QG]|[NA]}{[CT]|[{M(Oxidation (M))|F}G]}EPYQ{I|L}NAY;{[WN]|[YH]}MSPYQ{I|L}GGAY;{[WN]|[YH]}MSPY[AG]{I|L}NAY;{[WN]|[YH]}MSPY{I|L}QNAY;[AG]G{[CT]|[{M(Oxidation (M))|F}G]}EPYQ{I|L}NAY;[AG]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}EPYQ{I|L}NAY;{[QG]|[NA]}{[CT]|[{M(Oxidation (M))|F}G]}EPYQ{I|L}GGAY;{[QG]|[NA]}{[CT]|[{M(Oxidation (M))|F}G]}EPY[AG]{I|L}NAY;{[WN]|[YH]}MSPY[AG]{I|L}GGAY 7.5304;7.0115;6.8716;6.8716;6.6591;6.4377;6.396;6.3548;6.3548;6.215 +;-;-;-;-;-;-;-;-;- + 7567 1 1.186 93797.8 1.0 7825 5470 13280 HBL1_DMSO_200M_050219_1,13297 HBL1_DMSO_200M_050219_1,13297,HYMSPYQLNAY True True HYMSPYQLNAY 67.123436 693.812976062298 2612849.0 13280.0 ENSG00000124772|ENST00000244751|CPNE5;;nc|ENSG00000124772|Q9HCH3-2|CPNE5 8.639148712158203 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13298 67.137 766.0 277840.0 25 0 23527.0 + 6112 DSVILRSI 8 195 451.7688633815617 901.5231738299234 2 451.7682678103447 MULTI CID FTMS 0 0 0 13280 160712.9375 0.0307560847459994 9 -0.6922378540039062 18 Unmodified _DSVILRSI_ ENSG00000073734|ENST00000650372|ABCB11 58.6788170122104 0.1149141431586871 3 {[DS]|[MA]|[CV]|TT}V{I|L}{I|L}RS{I|L} 8 0 + 47.036 0.0 0.0 5.2174 5.2174 79.87 0.0 0.0 0.0 4.6040937697618745 4.259687322722819 4.259687322722819 4.259687322722819 0 0.7742275032520141 0.0 0.7742275032520141 0.25 + + {[DS]|[MA]|[CV]|TT}V{I|L}{I|L}RS{I|L};{[DS]|[MA]|[CV]|TT}V{I|L}{I|L}RTV;{[DS]|[MA]|[CV]|TT}V{I|L}{I|L}R{I|L}S;{[DS]|[MA]|[CV]|TT}V{I|L}{I|L}{I|L}RS;{[DS]|[MA]|[CV]|TT}VKKVN{I|L};{[DS]|[MA]|[CV]|TT}VKKVQV;{[DS]|[MA]|[CV]|TT}VKKVGG{I|L};RRR{[QS]|[NT]}S{I|L} 5.2174;4.7449;4.3477;3.7423;1.4998;1.0273;0.084794;0.026381 +;-;-;-;-;-;-;- + 514 + 1 1.186 165840.8 1.0 7826 5470 13280 HBL1_DMSO_200M_050219_1,13298 HBL1_DMSO_200M_050219_1,13298,DSVILRSI True True DSVILRSI 67.136686 451.768267810345 36671912.0 13280.0 ENSG00000073734|ENST00000650372|ABCB11 1.4042974710464478 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13299 67.147 583.0 319470.0 25 0 37284.0 + 36422 SYYDNVRPLAY 11 111 680.8303251699896 1359.646097406779 2 680.8316528201103 MULTI CID FTMS 0 0 0 13280 152328.8125 0.3971900468999108 -1 0.08447265625 19 Unmodified _SYYDNVRPLAY_ ENSG00000108830|ENST00000587250|RND2 143.21322497773306 0.013661600160579 3 {[{M(Oxidation (M))|F}C]|[YS]}YDNVRP{I|L}AY 11 0 + 88.118 0.0 0.0 6.481 6.481 60.554 0.0 0.0 0.0 0.0 15.260377294166872 0.0 0.0 0 3.56295299324845 0.0 0.5994850021680094 1.7856668758921828 + + {[{M(Oxidation (M))|F}C]|[YS]}YDNVRP{I|L}AY;{[YD]|[{M(Oxidation (M))|F}M]}YSNVRP{I|L}AY;{[{M(Oxidation (M))|F}C]|[YS]}YDNV[VG]P{I|L}AY;{[YD]|[{M(Oxidation (M))|F}M]}YSNV[VG]P{I|L}AY;{[{M(Oxidation (M))|F}C]|[YS]}YDGGVRP{I|L}AY;{[YD]|[{M(Oxidation (M))|F}M]}YSGGVRP{I|L}AY;{[YD]|[{M(Oxidation (M))|F}M]}YSNVR[{I|L}V][MT];{[{M(Oxidation (M))|F}C]|[YS]}[{I|L}V]RVND[MT]Y;{[{M(Oxidation (M))|F}C]|[YS]}[{I|L}V]RVN[{M(Oxidation (M))|F}E]AY;{[YD]|[{M(Oxidation (M))|F}M]}NVR{M(Oxidation (M))|F}CP{I|L}AY 6.481;6.481;5.8096;5.8096;5.2725;5.2725;5.163;5.0905;4.7814;4.7132 +;-;-;-;-;-;-;-;-;- + 2988 1 1.186 144430.6 1.0 7827 5470 13280 HBL1_DMSO_200M_050219_1,13299 HBL1_DMSO_200M_050219_1,13299,SYYDNVRPLAY True True SYYDNVRPLAY 67.146911 680.83165282011 6930843.0 13280.0 ENSG00000108830|ENST00000587250|RND2 10.576572100321451 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13300 67.159 579.0 252950.0 25 0 22224.0 + 45807 YYMEGRDSMQL 11 147 696.8010629027074 1391.5875728722149 2 696.8011962771416 MULTI CID FTMS 0 0 0 13280 151285.984375 0.7254972689052175 -1 0.08447265625 20 Unmodified _YYMEGRDSMQL_ ENSG00000165684|ENST00000684778|SNAPC4 57.10758569107544 0.0808838796364293 3 YYMK 4 8 59.262 0.0 0.0 4.2586 0.0 0.0 0.0 803.2799166315061 803.2799166315061 33.102306576409184 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.7742275032520141 YYMK 4.2586 - 1495 + 1 1.186 109457.3 1.0 7828 5470 13280 HBL1_DMSO_200M_050219_1,13300 HBL1_DMSO_200M_050219_1,13300,YYMEGRDSMQL True True YYMEGRDSMQL 67.158513 696.801196277142 2227737.75 13280.0 ENSG00000165684|ENST00000684778|SNAPC4 6.117653846740723 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13302 67.163 12.0 4573100.0 25 0 427920.0 + 4508 DAYKIRIRI 9 79 383.2364265038003 1146.687450111601 3 383.2363464236259 MULTI CID FTMS 0 0 0 13301 2391275.75 0.1365086779480276 3 -0.19805908203125 1 Unmodified _DAYKIRIRI_ ENSG00000143622|ENST00000368323|RIT1;nc|ENSG00000143622|Q92963-2|RIT1;nc|ENSG00000143622|Q92963-3|RIT1 14.838274106304384 0.4350285940865338 3 DA{I|L}YK 5 6 61.766 0.0 0.0 5.3865 0.0 0.0 0.0 553.3598621956367 553.3598621956367 58.2711470149615 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 DA{I|L}YK 5.3865 - 36 + 1 1.186 50991.7 1.0 7829 5471 13301 HBL1_DMSO_200M_050219_1,13302 HBL1_DMSO_200M_050219_1,13302,DAYKIRIRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13303 67.164 6.3 6733700.0 25 0 1057300.0 + 21610 LPKSIYSQI 9 76 524.8053892145365 1047.5962254958729 2 524.8056518435478 MULTI CID FTMS 0 0 0 13301 9164158.0 0.7052766389145145 -3 0.2695388793945312 2 Unmodified _LPKSIYSQI_ ENSG00000164934|ENST00000612750|DCAF13 59.36838082759317 0.0264317782606298 3 [{I|L}P]KSY{I|L}SQ{I|L} 9 2 + 65.703 0.0 0.0 6.2718 6.2718 84.52 0.0 0.0 0.0 17.78659694992122 16.478174818886373 16.478174818886373 5.198405410982616 0 1.066901560044258 1.5228787452803376 0.3252574989159953 0.0 [{I|L}P]KSY{I|L}SQ{I|L};[{I|L}P]KS{I|L}YSQ{I|L};[{I|L}P]KSYS{I|L}Q{I|L};[{I|L}P]KSYSQ{I|L}{I|L};[{I|L}P]KSY{I|L}S[AG]{I|L};[{I|L}P]KS{I|L}YS[AG]{I|L};[{I|L}P]KSYS{I|L}[AG]{I|L};[{I|L}P]KSYS[AG]{I|L}{I|L};[KP]{I|L}SY{I|L}SQ{I|L};[KP]{I|L}S{I|L}YSQ{I|L} 6.2718;5.7755;5.6739;5.6697;5.3928;4.8966;4.795;4.7907;4.5739;4.0777 -;+;-;-;-;-;-;-;-;- + 333 1 1.186 37039.3 1.0 7830 5471 13301 HBL1_DMSO_200M_050219_1,13303 HBL1_DMSO_200M_050219_1,13303,LPKSIYSQI True True LPKSIYSQI 67.163892 524.805651843548 93587008.0 13301.0 ENSG00000164934|ENST00000612750|DCAF13 5.015574137369792 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13304 67.165 9.8 5181800.0 25 0 802450.0 16813 KGPKTPDGR 9 74 478.26999700867896 954.525441084158 2 478.2699157595634 MULTI CID FTMS 0 0 0 13301 5486261.5 0.6779986276310818 -3 0.2695388793945312 3 Unmodified _KGPKTPDGR_ ENSG00000095464|ENST00000371447|PDE6C 3.944395688203298 0.7769873103969335 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.186 47269.2 1.0 7831 5471 13301 HBL1_DMSO_200M_050219_1,13304 HBL1_DMSO_200M_050219_1,13304,KGPKTPDGR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13305 67.166 17.0 2651900.0 25 0 273000.0 + 3670 DAENAMRYI 9 76 541.7501112633328 1081.4856695934654 2 541.7506591677666 MULTI CID FTMS 0 0 0 13301 2757270.0 0.1301284317836052 3 -0.19805908203125 4 Unmodified _DAENAMRYI_ ENSG00000114503|ENST00000321256|NCBP2;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;ENST00000479647.1_1_3:196664263-196668636:-|nuORF;nc|ENSG00000114503|P52298-2|NCBP2 69.10491478415734 0.0214449631113747 3 {[DA]|[EG]}ENAMRY{I|L} 9 0 + 94.676 0.0 0.0 8.7542 8.7542 94.192 0.0 0.0 0.0 76.7171311638593 11.706962271689749 11.706962271689749 9.208187539523747 0 1.7302046884880935 2.0 0.3807196863200844 0.8494850021680094 + + {[DA]|[EG]}ENAMRY{I|L};{[DA]|[EG]}EGGAMRY{I|L};WENAM[VG]Y{I|L};{[DA]|[EG]}E[C(Carbamidomethyl (C))R][VG]Y{I|L};WEGGAM[VG]Y{I|L};{[DA]|[EG]}[WQ]M[VG]Y{I|L};{[DA]|[EG]}ENAMR[Y{I|L}];{[DA]|[EG]}QDAMR[Y{I|L}];{[DA]|[EG]}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}M{M(Oxidation (M))|F};{[CP]|[EA]}DNAMR[Y{I|L}] 8.7542;7.9028;6.9049;5.4506;5.268;4.6363;4.3209;3.5643;3.5317;1.2576 +;-;-;-;-;-;+;-;-;- + 146 + 1 1.186 39431.2 1.0 7832 5471 13301 HBL1_DMSO_200M_050219_1,13305 HBL1_DMSO_200M_050219_1,13305,DAENAMRYI True True DAENAMRYI 67.166251 541.750659167767 865312480.0 13301.0 ENST00000479647.1_1_3:196664263-196668636:-|nuORF;;ENSG00000114503|ENST00000321256|NCBP2;;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;;nc|ENSG00000114503|P52298-2|NCBP2 7.794244766235352 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13306 67.167 14.0 3389500.0 25 0 139620.0 + 30300 QYQRMLSTL 9 94 570.2981556836663 1138.5817584341326 2 570.2976562380791 MULTI CID FTMS 0 0 0 13301 2559362.5 1.0 0 0.0 5 Unmodified _QYQRMLSTL_ ENSG00000163634|ENST00000295899|THOC7;ENST00000487570.1_1_3:63824036-63825384:-|nuORF 33.4449034751529 0.1114409586740657 3 [{I|L}P]YE{I|L}[YQ]T{I|L} 9 7 + 30.085 0.0 0.0 2.6424 2.6424 73.713 0.0 0.0 0.0 6.905367682672367 6.797283670189461 6.797283670189461 4.771212547196626 0 0.3252574989159953 0.0 0.0 0.0 [{I|L}P]YE{I|L}[YQ]T{I|L};[{I|L}P]Y{I|L}E[YQ]T{I|L};[H{I|L}][HV]E[YQ]T{I|L} 2.6424;2.2233;0.91084 -;-;- 299 + 1 1.186 41810.1 1.0 7833 5471 13301 HBL1_DMSO_200M_050219_1,13306 HBL1_DMSO_200M_050219_1,13306,QYQRMLSTL True True QYQRMLSTL 67.167428 570.297656238079 24769100.0 13301.0 ENSG00000163634|ENST00000295899|THOC7;;THOC7|p.S63L|1|0.29|ENSG00000163634|chr3:63838449-63838449|G/A|missense_variant;;ENST00000487570.1_1_3:63824036-63825384:-|nuORF 6.798230012257894 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13307 67.169 19.0 2133100.0 25 0 331730.0 + 24436 MGYKTIMV 8 76 471.74279793318175 941.4710429331636 2 471.7430908083916 MULTI CID FTMS 0 0 0 13301 2082703.125 0.1931289094357801 -3 0.2695388793945312 6 Unmodified _MGYKTIMV_ ENSG00000084774|ENST00000264705|CAD 19.438996006549623 0.6237395211498085 3 MV 2 6 21.198 0.0 0.0 2.2516 0.0 0.0 693.3518240384354 0.0 693.3518240384354 0.0 11.714704076321778 0.0 0.0 0 0.5 0.0 0.0 0.0 + MV 2.2516 + + 95 + 1 1.186 40774.9 1.0 7834 5471 13301 HBL1_DMSO_200M_050219_1,13307 HBL1_DMSO_200M_050219_1,13307,MGYKTIMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13308 67.17 33.0 1984900.0 25 0 210700.0 + 45094 YPYPYPHTL 9 88 575.7823890577012 1149.5502251822022 2 575.7823974490166 MULTI CID FTMS 0 0 0 13301 1837168.0 0.2940381965023058 -3 0.2695388793945312 7 Unmodified _YPYPYPHTL_ ENSG00000116221|ENST00000360840|MRPL37 77.98433622928108 0.0180125044636492 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPH[{I|L}T] 9 0 + 77.7 0.0 0.0 6.7591 6.7591 93.281 0.0 0.0 0.0 47.874467812752926 20.132192780232785 20.132192780232785 22.354771935914 0 1.1861818737241734 2.0 1.5994850021680094 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPH[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}YPY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[QN]|[E{I|L}]|[KN]}DH[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YV[VS]YPY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}{M(Oxidation (M))|F}{I|L}YPY;{[YD]|[{M(Oxidation (M))|F}M]}{[QN]|[E{I|L}]|[KN]}YPH[{I|L}T];{[YD]|[{M(Oxidation (M))|F}M]}Y{[QN]|[E{I|L}]|[KN]}PH[{I|L}T];{[YD]|[{M(Oxidation (M))|F}M]}Y{I|L}{M(Oxidation (M))|F}{I|L}C[{I|L}T];{[YD]|[{M(Oxidation (M))|F}M]}Y{I|L}TVVDY;[HA]{[QS]|[NT]}AT{I|L}YPY 6.7591;4.8145;4.1655;3.2178;2.2048;1.9486;1.9486;1.8847;1.7315;1.1035 +;-;-;-;-;-;-;-;-;- + 203 + 1 1.186 55827.2 1.0 7835 5471 13301 HBL1_DMSO_200M_050219_1,13308 HBL1_DMSO_200M_050219_1,13308,YPYPYPHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13309 67.171 18.0 2170000.0 25 0 125070.0 + 4592 DAYTHLETF 9 77 548.7504063038496 1095.486259674499 2 548.7514526247978 MULTI CID FTMS 0 0 0 13301 1717306.125 0.2810095731584043 -3 0.2695388793945312 8 Unmodified _DAYTHLETF_ ENSG00000115267|ENST00000649979|IFIH1 34.10243960390752 0.1078313939113124 3 [HT]YW{I|L}ET{M(Oxidation (M))|F} 8 4 + 29.843 0.0 0.0 2.7241 2.7241 70.526 0.0 0.0 0.0 2.7422750325201406 14.358047753830974 2.7422750325201406 2.5404627391502963 0 0.8182503180159344 0.0 0.4247425010840047 0.0 [HT]YW{I|L}ET{M(Oxidation (M))|F};[HT]{I|L}EYGET{M(Oxidation (M))|F};[HT]{I|L}YEGET{M(Oxidation (M))|F};[HT]Y{I|L}EGET{M(Oxidation (M))|F};{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}W{I|L}ET{M(Oxidation (M))|F};{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EGET{M(Oxidation (M))|F};[HT]{I|L}EYWT{M(Oxidation (M))|F};[HT]Y{[DA]|[EG]}{I|L}ET{M(Oxidation (M))|F};[HT]Y{I|L}WET{M(Oxidation (M))|F};[HT]Y{I|L}EWT{M(Oxidation (M))|F} 2.7241;2.4922;2.3782;2.3782;2.3741;2.033;1.9009;1.8787;1.7868;1.7868 -;-;-;-;-;-;-;-;-;- 653 1 1.186 39058.5 1.0 7836 5471 13301 HBL1_DMSO_200M_050219_1,13309 HBL1_DMSO_200M_050219_1,13309,DAYTHLETF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13310 67.172 44.0 1268500.0 25 0 170780.0 + 36435 SYYKDALRF 9 58 388.2011565620597 1161.581640286379 3 388.2010681033134 MULTI CID FTMS 0 0 0 13301 1366143.0 0.5325392338689126 2 -0.1665496826171875 9 Unmodified _SYYKDALRF_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF;nc|ENSG00000185627|Q9UNM6-2|PSMD13 32.78568957990786 0.1150597335874693 3 {[{M(Oxidation (M))|F}C]|[YS]}YKDA{I|L}[R{M(Oxidation (M))|F}] 9 0 + 43.21 0.0 0.0 3.7199 3.7199 77.532 0.0 0.0 0.0 36.22031878693626 7.1919646325935815 7.1919646325935815 6.478174818886373 0 0.3054621874040891 0.0 0.0 0.7302046884880937 + + {[{M(Oxidation (M))|F}C]|[YS]}YKDA{I|L}[R{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}C]|[YS]}YKW{I|L}[R{M(Oxidation (M))|F}] 3.7199;3.1622 +;- + 66 + 1 1.186 50781.3 1.0 7837 5471 13301 HBL1_DMSO_200M_050219_1,13310 HBL1_DMSO_200M_050219_1,13310,SYYKDALRF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13311 67.173 30.0 1515700.0 25 0 189800.0 37352 TKHSILTLK 9 79 520.8269190365223 1039.6392851398446 2 520.8272582888603 MULTI CID FTMS 0 0 0 13301 1140983.75 0.5419387481749086 -3 0.2695388793945312 10 Unmodified _TKHSILTLK_ ENST00000415794.1_1_3:139212742-139212994:+|nuORF 31.26834338654808 0.1333407332142048 3 {I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]T[K{I|L}] 8 5 + 27.017 0.0 0.0 2.5987 2.5987 81.591 0.0 0.0 0.0 2.136482505044601 2.136482505044601 2.136482505044601 25.80218545186758 0 1.0 0.0 0.3494850021680094 0.2887254899964357 {I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]T[K{I|L}];{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[RK][HV] 2.5987;0.11685 -;- 79 + 1 1.186 40641.6 1.0 7838 5471 13301 HBL1_DMSO_200M_050219_1,13311 HBL1_DMSO_200M_050219_1,13311,TKHSILTLK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13312 67.175 50.0 1109400.0 25 0 187810.0 + 15550 IPWMGDHKI 9 95 366.1919779416816 1095.5541044252448 3 366.1917297244072 MULTI CID FTMS 0 0 0 13301 1087288.75 0.9319913764404876 -3 0.2695388793945312 11 Unmodified _IPWMGDHKI_ ENSG00000061936|ENST00000261674|SFSWAP;ENST00000535399.1_1_12:132195753-132198841:+|nuORF;ENST00000540469.5_1_12:132195753-132196293:+|nuORF;nc|ENSG00000061936|Q12872-2|SFSWAP 24.881564428377168 0.2146028316269493 3 {I|L}PWM[DG]HK{I|L} 9 0 + 39.232 0.0 0.0 3.581 3.581 81.057 0.0 0.0 0.0 16.699988505113538 5.203489767154871 5.203489767154871 9.789784483085649 0 0.0 0.0 0.7134679910804405 0.2396518287104437 + + {I|L}PWM[DG]HK{I|L};{I|L}{I|L}P{[CT]|[{M(Oxidation (M))|F}G]}M[PG][HQ];{I|L}{I|L}{[MG]|[TS]}{I|L}M[PG][HQ];{I|L}P{I|L}{[CT]|[{M(Oxidation (M))|F}G]}M[PG][HQ];{I|L}P{[CT]|[{M(Oxidation (M))|F}G]}{I|L}M[PG][HQ];{I|L}{I|L}{[MG]|[TS]}M{I|L}[PG][HQ];{I|L}PW[YV][PG][HQ];{I|L}{I|L}{[MG]|[TS]}[RN]Q[HQ];{I|L}P{[CT]|[{M(Oxidation (M))|F}G]}M{I|L}[PG][HQ];{I|L}P{[CT]|[{M(Oxidation (M))|F}G]}[RN]Q[HQ] 3.581;2.6874;2.231;2.0651;1.6087;1.4596;1.2873;1.1993;0.83735;0.57699 +;-;-;-;-;-;-;-;-;- + 507 + 1 1.186 54583.0 1.0 7839 5471 13301 HBL1_DMSO_200M_050219_1,13312 HBL1_DMSO_200M_050219_1,13312,IPWMGDHKI False True IPWMGDHKI 67.174674 366.191729724407 8880037.0 13301.0 nc|ENSG00000061936|Q12872-2|SFSWAP;;ENST00000540469.5_1_12:132195753-132196293:+|nuORF;;ENSG00000061936|ENST00000261674|SFSWAP;;ENST00000535399.1_1_12:132195753-132198841:+|nuORF 5.149099032084147 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13313 67.176 27.0 1038200.0 25 0 97571.0 37188 TIEWNDVTL 9 58 545.7740683929251 1089.53358385265 2 545.7747680544853 MULTI CID FTMS 0 0 0 13301 1041605.0 0.4593133593687558 -3 0.2695388793945312 12 Unmodified _TIEWNDVTL_ ENSG00000134216|ENST00000369740|CHIA 12.531546534597751 0.4974689918368763 3 {I|L} 1 8 14.604 0.0 0.0 1.3404 0.0 0.0 958.4386264325314 0.0 958.4386264325314 0.0 7.257724967479859 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3404 + + 24 + 1 1.186 28625.8 1.0 7840 5471 13301 HBL1_DMSO_200M_050219_1,13313 HBL1_DMSO_200M_050219_1,13313,TIEWNDVTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13314 67.177 47.0 758180.0 25 0 51256.0 + 41203 VPENMEITV 9 80 516.2558955175426 1030.4972381018852 2 516.2559081912041 MULTI CID FTMS 0 0 0 13301 939244.4375 0.1096915511954552 6 -0.4392776489257812 13 Unmodified _VPENMEITV_ REV__ENSG00000132646|ENST00000379143|PCNA 18.13498045792455 0.3457906370836843 3 V 1 -1 14.604 0.0 0.0 1.4172 0.0 0.0 913.4177378350868 0.0 913.4177378350868 0.0 -4.406140654642812 -4.406140654642812 0.0 0 0.0 0.0 0.0 0.0 V 1.4172 + + 50 + 1 1.186 38276.4 1.0 7841 5471 13301 HBL1_DMSO_200M_050219_1,13314 HBL1_DMSO_200M_050219_1,13314,VPENMEITV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13315 67.179 87.0 976120.0 25 0 91901.0 + 42888 VVPAALKVV 9 101 448.3025612293231 894.5905695254462 2 448.3026611208916 MULTI CID FTMS 0 0 0 13301 909252.125 0.09146721060315 6 -0.4392776489257812 14 Unmodified _VVPAALKVV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 34.10243960390752 0.1078313939113124 3 VVPAA{I|L}KVV 9 0 + 43.036 0.0 0.0 4.8107 4.8107 73.753 0.0 0.0 0.0 9.390559655212847 6.921393992897158 6.921393992897158 1.249387366082999 0 0.3807196863200844 2.0 0.0 0.0 + + VVPAA{I|L}KVV;VVPAA{I|L}VKV 4.8107;4.671 +;- + 192 + 1 1.186 71709.2 1.0 7842 5471 13301 HBL1_DMSO_200M_050219_1,13315 HBL1_DMSO_200M_050219_1,13315,VVPAALKVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13316 67.18 31.0 1264000.0 25 0 104790.0 23018 LSISLHVWV 9 73 527.3079137853925 1052.601274637585 2 527.3085204958916 MULTI CID FTMS 0 0 0 13301 726386.125 1.0 0 0.0 15 Unmodified _LSISLHVWV_ ENSG00000149483|ENST00000278826|TMEM138;ENST00000507563.6_1_11:61131784-61135625:+|nuORF;ENST00000534963.5_1_11:61131784-61133703:+|nuORF;nc|ENSG00000149483|Q9NPI0-2|TMEM138;nc|ENSG00000149483|Q9NPI0-3|TMEM138 11.494710602746466 0.5255349189887087 3 {[TV]|[{I|L}S]}{I|L}DH 5 5 44.961 0.0 0.0 4.2714 0.0 0.0 0.0 484.28952966861567 484.28952966861567 33.178025911114645 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}DH 4.2714 - 40 + 1 1.186 37760.0 1.0 7843 5471 13301 HBL1_DMSO_200M_050219_1,13316 HBL1_DMSO_200M_050219_1,13316,LSISLHVWV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13317 67.182 89.0 660910.0 25 0 49589.0 + 4998 DGTILQQV 8 91 437.23752966352873 872.4605063938575 2 437.2376891970634 MULTI CID FTMS 0 0 0 13301 797206.75 0.2196601014651896 -3 0.2695388793945312 16 Unmodified _DGTILQQV_ ENSG00000001167|ENST00000341376|NFYA;nc|ENSG00000001167|P23511-2|NFYA 32.116972079565 0.368454113111938 3 [DG]T{I|L} 4 4 16.604 0.0 0.0 1.9031 0.0 0.0 0.0 483.2578446109075 483.2578446109075 0.5462187404089072 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.8494850021680094 0.0 + [DG]T{I|L} 1.9031 + + 109 1 1.186 51023.0 1.0 7844 5471 13301 HBL1_DMSO_200M_050219_1,13317 HBL1_DMSO_200M_050219_1,13317,DGTILQQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13318 67.187 285.0 351650.0 25 0 22616.0 + 13844 HVFDHPWETV 10 113 633.798560762359 1265.582568591518 2 633.7995483279228 MULTI CID FTMS 0 0 0 13301 675176.4375 0.4774767229046194 3 -0.19805908203125 17 Unmodified _HVFDHPWETV_ ENSG00000101166|ENST00000355937|PRELID3B;ENST00000466051.1_1_20:57613469-57617839:-|nuORF;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 107.1870275148908 0.0044622492419181 3 [WP]{[QS]|[NT]}HPWETV 10 4 + 73.906 0.0 0.0 5.8397 5.8397 85.382 0.0 0.0 0.0 7.659389507179341 15.026975159433531 7.659389507179341 7.659389507179341 0 1.031234684152075 1.2218487496163564 1.1989700043360187 0.0 [WP]{[QS]|[NT]}HPWETV;[HV][PA]{[QC]|[C(Carbamidomethyl (C))A]}PWETV;[WP]{[QS]|[NT]}HPWTEV;[HV][PA]{[QC]|[C(Carbamidomethyl (C))A]}PWTEV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YT]HPWETV;[WP]ETVH{[{M(Oxidation (M))|F}D]|MM}HV;[PS][WQ]HPWETV;[WP]ENQQQHTV;[HV][YN]VH{[{M(Oxidation (M))|F}D]|MM}HV;HV{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}QNE[HQ] 5.8397;5.2345;4.8701;4.2649;4.2065;4.0578;4.0075;3.9937;3.9182;3.5885 -;-;-;-;-;-;-;-;-;- 3281 1 1.186 78203.7 1.0 7845 5471 13301 HBL1_DMSO_200M_050219_1,13318 HBL1_DMSO_200M_050219_1,13318,HVFDHPWETV True True HVFDHPWETV 67.187461 633.799548327923 23830650.0 13301.0 ENST00000466051.1_1_20:57613469-57617839:-|nuORF;;ENSG00000101166|ENST00000355937|PRELID3B;;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 8.42227284113566 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13319 67.193 328.0 470030.0 25 0 45245.0 + 36437 SYYKDALRF 9 121 581.7982609628498 1161.5819689924997 2 581.7987548708916 MULTI CID FTMS 0 0 0 13301 526373.3125 0.3947073335564173 3 -0.19805908203125 18 Unmodified _SYYKDALRF_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF;nc|ENSG00000185627|Q9UNM6-2|PSMD13 69.33821966488729 0.021354776001734 3 SYYKDA{I|L}R{M(Oxidation (M))|F} 9 0 + 106.05 0.0 0.0 9.1299 9.1299 92.088 0.0 0.0 0.0 30.72559982972641 6.910103904887734 6.910103904887734 6.910103904887734 0 1.9049471895720984 2.0 0.0 1.079689690656103 + + SYYKDA{I|L}R{M(Oxidation (M))|F};SYYKDA{I|L}{M(Oxidation (M))|F}R;SYYKD{M(Oxidation (M))|F}[{I|L}A]R;SYYKD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}V;SYYK{M(Oxidation (M))|F}D[{I|L}A]R;{M(Oxidation (M))|F}CYKW{I|L}R{M(Oxidation (M))|F};SY{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A{I|L}R{M(Oxidation (M))|F};SYYKD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{I|L};SYY{M(Oxidation (M))|F}KD[{I|L}A]R;SYYK{M(Oxidation (M))|F}{[RE]|[WV]}AV 9.1299;8.535;7.3974;6.5557;6.5134;6.4847;6.4554;6.3464;6.3399;6.045 +;-;-;-;-;-;-;-;-;- + 1749 + 1 1.186 116422.3 1.0 7846 5471 13301 HBL1_DMSO_200M_050219_1,13319 HBL1_DMSO_200M_050219_1,13319,SYYKDALRF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13320 67.195 46.0 462970.0 25 0 58120.0 + 37001 TFPAYPGSSSM 11 48 572.7530876818781 1143.4916224305562 2 572.7545654177666 MULTI CID FTMS 0 0 0 13301 401228.625 0.5885500023240713 -3 0.2695388793945312 19 Unmodified _TFPAYPGSSSM_ ENSG00000004975|ENST00000005340|DVL2;ENST00000571745.1_1_17:7130492-7131139:-|nuORF;ENST00000576840.5_1_17:7130280-7131353:-|nuORF 2.9952420565917617 0.861016188266951 3 M 1 10 11.99 0.0 0.0 1.0485 0.0 0.0 994.4405645465704 0.0 994.4405645465704 0.0 10.569716761534185 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 1.0485 + + 7 + 1 1.186 21898.7 1.0 7847 5471 13301 HBL1_DMSO_200M_050219_1,13320 HBL1_DMSO_200M_050219_1,13320,TFPAYPGSSSM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13321 67.201 372.0 274860.0 25 0 43377.0 + 41905 VQFEDGQKIVV 11 134 631.3436361930883 1260.6727194529765 2 631.3440429568291 MULTI CID FTMS 0 0 0 13301 375266.71875 0.5702039451910653 -3 0.2695388793945312 20 Unmodified _VQFEDGQKIVV_ ENSG00000108946|ENST00000589228|PRKAR1A;ENST00000586541.5_2_17:66524793-66526587:+|nuORF;nc|ENSG00000108946|P10644-2|PRKAR1A 59.05245873256422 0.0729907235015292 3 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E[NS]{I|L}VQVV 11 5 + 64.636 0.0 0.0 5.1271 5.1271 77.251 0.0 0.0 0.0 12.636549635980929 7.852135717294459 7.852135717294459 2.887254899964354 0 1.4291746928241125 1.0457574905606752 1.0189301784845295 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E[NS]{I|L}VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}EK{[DA]|[EG]}VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E[NS]{I|L}N{I|L}VV;{[QV]|[N{I|L}]|[RA]|[KV]}[KA]DE{M(Oxidation (M))|F}VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}EK{[DA]|[EG]}N{I|L}VV;{[QV]|[N{I|L}]|[RA]|[KV]}[KA]DE{M(Oxidation (M))|F}N{I|L}VV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E[NS]{I|L}V[AG]VV;{[QV]|[N{I|L}]|[RA]|[KV]}[NS]{I|L}E{M(Oxidation (M))|F}VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}EQ[VS]VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}EK{[DA]|[EG]}V[AG]VV 5.1271;4.8981;4.8883;4.6836;4.6593;4.4449;4.403;4.3052;4.1817;4.174 -;-;-;-;-;-;-;-;-;- 3786 1 1.186 80870.8 1.0 7848 5471 13301 HBL1_DMSO_200M_050219_1,13321 HBL1_DMSO_200M_050219_1,13321,VQFEDGQKIVV True True VQFEDGQKIVV 67.201403 631.344042956829 4998770.0 13301.0 ENST00000586541.5_2_17:66524793-66526587:+|nuORF;;ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 4.0537956555684405 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13323 67.206 33.0 3200300.0 25 0 779560.0 + 5018 DGVPVIKV 8 77 413.7553654993275 825.4961780654551 2 413.7553283572197 MULTI CID FTMS 0 0 0 13322 1611026.75 0.2582328590166572 4 -0.3007659912109375 1 Unmodified _DGVPVIKV_ ENSG00000109270|ENST00000499666|LAMTOR3 36.04419817259434 0.3004715606373109 3 [DG]VVP{I|L}KV 8 2 [DG]V + + 27.277 14.225 5.2469 3.3043 3.3043 50.801 0.0 0.0 0.0 0.0 13.051766396111082 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.25 [DG]VVP{I|L}KV 3.3043 - 75 + 1 1.186 85680.7 1.0 7849 5472 13322 HBL1_DMSO_200M_050219_1,13323 HBL1_DMSO_200M_050219_1,13323,DGVPVIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13324 67.208 72.0 849520.0 25 0 37984.0 -1 RCHRRRRRCCC 11 71 866.9067123982009 1731.7988718632016 2 866.9137451052666 MULTI CID FTMS 0 0 0 13322 606760.4375 0.0317003408531291 -5 0.3399887084960937 2 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 3 [MN]PN{I|L}NADQ[QP]AN{I|L} 14 -1 89.963 0.0 0.0 5.1948 0.0 0.0 0.0 208.0731600397094 208.0731600397094 63.03981384658137 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 1.579689690656103 [MN]PN{I|L}NADQ[QP]AN{I|L} 5.1948 - 4122 + 1 1.186 48104.4 1.0 7850 5472 13322 HBL1_DMSO_200M_050219_1,13324 HBL1_DMSO_200M_050219_1,13324,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13325 67.211 159.0 1105400.0 25 0 83423.0 + 36607 TAPLKKIHN 9 153 511.3092773863357 1020.6040018394716 2 511.3100768923759 MULTI CID FTMS 0 0 0 13322 415008.1875 0.0341797996180832 -2 0.1363143920898437 3 Unmodified _TAPLKKIHN_ REV__ENSG00000165501|ENST00000298288|LRR1;REV__ENST00000540712.1_1_14:50068361-50081211:+|nuORF 6.723162845929126 0.6799819581413107 3 {I|L} 1 -1 11.594 0.0 0.0 1.136 0.0 0.0 889.5092122660325 0.0 889.5092122660325 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.136 + + 107 + 1 1.186 135605.8 1.0 7851 5472 13322 HBL1_DMSO_200M_050219_1,13325 HBL1_DMSO_200M_050219_1,13325,TAPLKKIHN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13326 67.212 53.0 1712800.0 25 0 207620.0 + 1181 AHWRHHLL 8 109 357.1986037036032 1068.5739817110095 3 357.1978637576103 MULTI CID FTMS 0 0 0 13322 458499.84375 0.6801502765475649 1 -0.123443603515625 4 Unmodified _AHWRHHLL_ nc|ENSG00000073737|Q9BPW9-4|DHRS9 15.768221252438446 0.6779680726941459 3 {I|L} 1 7 19.604 0.0 0.0 1.8346 0.0 0.0 937.4788564442111 0.0 937.4788564442111 0.0 8.331049931792545 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L} 1.8346 + + 122 + 1 1.186 80022.8 1.0 7852 5472 13322 HBL1_DMSO_200M_050219_1,13326 HBL1_DMSO_200M_050219_1,13326,AHWRHHLL False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13327 67.221 519.0 627340.0 25 0 70176.0 + 30725 RGLDDIKDLKV 11 189 424.5820517231634 1270.7243257696905 3 424.5819885134697 MULTI CID FTMS 0 0 0 13322 386461.34375 0.1254163248675877 -2 0.1363143920898437 5 Unmodified _RGLDDIKDLKV_ ENSG00000155363|ENST00000369645|MOV10;ENST00000488160.5_1_1:113239361-113241636:+|nuORF 67.18715484511479 0.0405561849940448 3 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}D{I|L}KD{I|L}KV 11 4 + 96.991 0.0 0.0 7.6327 7.6327 88.172 0.0 0.0 0.0 5.007239877717581 14.413994955440856 5.007239877717581 5.007239877717581 0 2.853917193908117 1.5228787452803376 0.4247425010840047 1.1307196863200843 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}D{I|L}KD{I|L}KV;{[NV]|[RG]}{I|L}DD{I|L}KD{I|L}KV;{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]D{I|L}KD{I|L}KV;{NN|[MP]|[D{I|L}]|[EV]}KQ{[QG]|[NA]}KD{I|L}KV;{[QN]|[E{I|L}]|[KN]}[QA]D{I|L}KD{I|L}KV;[K{I|L}]DQ{[QG]|[NA]}KD{I|L}KV;{[QN]|[E{I|L}]|[KN]}AAGD{I|L}KD{I|L}KV;{NN|[MP]|[D{I|L}]|[EV]}KVWRD{I|L}KV;{NN|[MP]|[D{I|L}]|[EV]}K[AG]{[QG]|[NA]}KD{I|L}KV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Q{[QG]|[NA]}KD{I|L}KV 7.6327;7.2387;6.9111;6.1184;5.9701;5.7965;5.6709;5.4946;5.4;5.3968 -;+;-;-;-;-;-;-;-;- + 5049 1 1.186 267493.9 1.0 7853 5472 13322 HBL1_DMSO_200M_050219_1,13327 HBL1_DMSO_200M_050219_1,13327,RGLDDIKDLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13328 67.229 436.0 623800.0 25 0 46186.0 + 35471 STLTEEGVIKV 11 203 588.3293989192194 1174.6442449052388 2 588.3298217654228 MULTI CID FTMS 0 0 0 13322 369903.34375 0.3468323180758341 -2 0.1363143920898437 6 Unmodified _STLTEEGVIKV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 96.93554129104106 0.0004233824087558 3 {[MG]|[TS]}{I|L}TEER{I|L}KV 10 2 + 77.692 0.0 0.0 6.6141 6.6141 79.917 0.0 0.0 0.0 7.2699872793626525 1.312789146393186 1.312789146393186 1.312789146393186 0 1.4049471895720984 0.0 1.2585820071949734 0.2215141619232908 {[MG]|[TS]}{I|L}TEER{I|L}KV;{[MG]|[TS]}{I|L}TEER{I|L}VK;{[MG]|[TS]}{I|L}TEERVK{I|L};{[MG]|[TS]}{I|L}TEE[VG]{I|L}KV;{[MG]|[TS]}{I|L}TEE[VG]{I|L}VK;{[MG]|[TS]}{I|L}TEERV{I|L}K;{[MG]|[TS]}{I|L}TEERKV{I|L};{[MG]|[TS]}{I|L}TEERK{I|L}V;{[MG]|[TS]}{I|L}TEE[VG]VK{I|L};{[MG]|[TS]}{I|L}TEE[VG]V{I|L}K 6.6141;6.5024;5.867;5.8339;5.7222;5.5943;5.5853;5.4243;5.0868;4.8141 -;-;-;+;-;-;-;-;-;- + 10366 + 1 1.186 201958.7 1.0 7854 5472 13322 HBL1_DMSO_200M_050219_1,13328 HBL1_DMSO_200M_050219_1,13328,STLTEEGVIKV True True STLTEEGVIKV 67.228946 588.329821765423 13483566.0 13322.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 7.012686570485433 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13329 67.239 567.0 684810.0 25 0 123460.0 -1 0 214 343.7261141032588 685.4376752733176 2 343.7257873415947 MULTI CID FTMS 0 0 0 13322 363252.21875 0.3258998582916222 -2 0.1363143920898437 7 3 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}VK 6 -1 + 54.307 0.0 0.0 7.9229 7.9229 88.696 0.0 0.0 0.0 26.478174818886377 4.903930102758082 4.903930102758082 4.903930102758082 0 0.3807196863200844 2.0 0.0 0.4124379954164593 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}VK;{NN|[MP]|[D{I|L}]|[EV]}V{I|L}KV;{NN|[MP]|[D{I|L}]|[EV]}VV{I|L}K;{NN|[MP]|[D{I|L}]|[EV]}VVK{I|L} 7.9229;7.2075;6.5699;5.8906 -;-;-;- 141 + 1 1.186 305748.0 1.0 7855 5472 13322 HBL1_DMSO_200M_050219_1,13329 HBL1_DMSO_200M_050219_1,13329, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13330 67.251 687.0 493190.0 25 0 42304.0 + 38841 TVIDHLRSL 9 212 351.8734278088657 1052.598454026797 3 351.8730956912041 MULTI CID FTMS 0 0 0 13322 254599.8125 0.5031280331237726 -2 0.1363143920898437 8 Unmodified _TVIDHLRSL_ ENSG00000162851|ENST00000366514|TFB2M 43.9818466556824 0.0535980856389242 3 TV{I|L}DH{I|L}RS{I|L} 9 0 + 93.466 0.0 0.0 8.8796 8.8796 87.308 0.0 0.0 0.0 36.47817481888637 4.542583717601588 4.542583717601588 3.0102999566398125 0 0.8723637474483469 2.0 1.2302046884880935 0.6747425010840047 + + TV{I|L}DH{I|L}RS{I|L};TV{I|L}D{I|L}HRS{I|L};TV{I|L}DH{I|L}RTV;TV{I|L}DH{I|L}KD{I|L};TV{I|L}D{I|L}HRTV;TV{I|L}{I|L}DHRS{I|L};TV{I|L}D{I|L}HKD{I|L};TV{I|L}DH{I|L}KEV;TV{I|L}{I|L}DHRTV;TV{I|L}D{I|L}HKEV 8.8796;8.5936;8.448;8.1964;8.162;7.9756;7.9104;7.7649;7.544;7.4789 +;-;-;-;-;-;-;-;-;- + 911 + 1 1.186 273149.5 1.0 7856 5472 13322 HBL1_DMSO_200M_050219_1,13330 HBL1_DMSO_200M_050219_1,13330,TVIDHLRSL True True TVIDHLRSL 67.250817 351.873095691204 8433452.75 13322.0 ENSG00000162851|ENST00000366514|TFB2M 3.897813320159912 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13331 67.261 600.0 427660.0 25 0 30810.0 + 14100 IAQQMMPEV 9 110 1046.501641713017 1045.4943652464171 1 1046.502978503704 MULTI CID FTMS 0 0 0 13322 238455.734375 0.6363799786983296 -2 0.1363143920898437 9 Unmodified _IAQQMMPEV_ ENSG00000131100|ENST00000253413|ATP6V1E1;nc|ENSG00000131100|P36543-2|ATP6V1E1;nc|ENSG00000131100|P36543-3|ATP6V1E1 75.76082778847304 0.0188720312721366 3 [QA]GA{M(Oxidation (M))|F}D{I|L}PEV 10 5 + 80.527 0.0 0.0 7.7023 7.7023 86.235 0.0 0.0 0.0 6.021825181113627 16.53212513775344 6.021825181113627 3.36696871556164 0 1.0 0.0 0.3807196863200844 1.4604093769761874 [QA]GA{M(Oxidation (M))|F}D{I|L}PEV;[QA]GAM{I|L}MPEV;[QA]GA{I|L}MMPEV;[QA]GA{M(Oxidation (M))|F}PMPEV;QQA{M(Oxidation (M))|F}D{I|L}PEV;[QA]GMA{I|L}MPEV;{[QV]|[N{I|L}]|[RA]|[KV]}C(Carbamidomethyl (C))A{I|L}MPEV;[QA]Q{M(Oxidation (M))|F}D{I|L}PEV;QQAM{I|L}MPEV;QQA{I|L}MMPEV 7.7023;7.3802;7.3314;7.1899;7.1263;7.0716;6.9048;6.8384;6.8042;6.7554 -;-;-;-;-;-;-;-;-;- 7038 1 1.186 162428.1 1.0 7857 5472 13322 HBL1_DMSO_200M_050219_1,13331 HBL1_DMSO_200M_050219_1,13331,IAQQMMPEV True True IAQQMMPEV 67.261344 1046.5029785037 3821072.0 13322.0 nc|ENSG00000131100|P36543-3|ATP6V1E1;;ENSG00000131100|ENST00000253413|ATP6V1E1;;nc|ENSG00000131100|P36543-2|ATP6V1E1 4.286545356114705 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13332 67.272 594.0 394370.0 25 0 15874.0 + -1 VTLDPDTANPEL 12 192 642.3444191436931 1282.6742853541862 2 642.3456909060478 MULTI CID FTMS 0 0 0 13322 126135.2578125 0.7369686431284952 1 -0.123443603515625 10 Carbamidomethyl (C) _TVRPAQLC(Carbamidomethyl (C))EPL_ nc|ENSG00000154370|Q96F44-3|TRIM11;ENSG00000154370|ENST00000284551|TRIM11 29.081581746732265 0.4093582134107448 3 {[TV]|[{I|L}S]}VG[H{I|L}][YK]VHM 11 -1 + 43.764 0.0 0.0 3.412 3.412 78.863 0.0 0.0 0.0 4.255997979614662 3.274343243589541 3.274343243589541 9.04910124016004 0 0.805462187404089 1.3979400086720375 0.2887254899964357 0.3807196863200844 {[TV]|[{I|L}S]}VG[H{I|L}][YK]VHM;[{I|L}P][HK][RH]EVHM;{NN|[MP]|[D{I|L}]|[EV]}K[H{I|L}][YK]VHM;[{I|L}P][HK]M[YK]VHM;[{I|L}T]AA[H{I|L}][YK]VHM;[VS]{I|L}G[H{I|L}][YK]VHM;[VS]VA[H{I|L}][YK]VHM 3.412;2.7065;2.6995;2.4718;2.0712;1.9471;1.4022 -;-;-;-;-;-;- 3238 1 1.186 173023.9 1.0 7858 5472 13322 HBL1_DMSO_200M_050219_1,13332 HBL1_DMSO_200M_050219_1,13332,TVRPAQLCEPL False False VTLDPDTANPEL 67.271746 642.345690906048 15057701.0 13322.0 nc|ENSG00000154370|Q96F44-3|TRIM11;;ENSG00000154370|ENST00000284551|TRIM11 2.701801300048828 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13333 67.284 607.0 364700.0 25 0 38709.0 + 30815 RIIDVSTVKEL 11 156 636.8791535387459 1271.7437541442916 2 636.8797485232353 MULTI CID FTMS 0 0 0 13322 113034.6875 0.1070614736159654 -2 0.1363143920898437 11 Unmodified _RIIDVSTVKEL_ ENSG00000076043|ENST00000265881|REXO2;ENST00000538403.5_1_11:114314877-114320694:+|nuORF;ENST00000538791.3_1_11:114315223-114320694:+|nuORF;ENST00000539333.5_1_11:114316741-114316810:+|nuORF;ENST00000539788.5_1_11:114314891-114320694:+|nuORF;ENST00000543131.5_1_11:114310234-114320694:+|nuORF;nc|ENSG00000076043|Q9Y3B8-2|REXO2;nc|ENSG00000076043|Q9Y3B8-3|REXO2 59.012897905743536 0.0731512788572055 3 {[QN]|[E{I|L}]|[KN]}[RV]VSTVKE{I|L} 11 3 + 84.608 0.0 0.0 6.6529 6.6529 90.929 0.0 0.0 0.0 10.154043613776436 53.531511926785726 10.154043613776436 10.410027793526382 0 1.3193415193665468 0.4559319556497244 1.6634117563873403 0.0 {[QN]|[E{I|L}]|[KN]}[RV]VSTVKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]VSTVKE{I|L};{I|L}{I|L}[RD]VSTVKE{I|L};[{I|L}V]{[RE]|[WV]}VSTVKE{I|L};[K{I|L}]QQVSTVKE{I|L};[Q{I|L}][KQ]VSTVKE{I|L};{[QN]|[E{I|L}]|[KN]}[RV]{[WT]|[RM]}VKE{I|L};{[QN]|[E{I|L}]|[KN]}[RV]VSTV[RD]V;{[QN]|[E{I|L}]|[KN]}[RV]V{[WT]|[RM]}KE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{[WT]|[RM]}VKE{I|L} 6.6529;5.8343;5.7563;5.6767;5.4994;5.2889;4.7855;4.4659;4.2648;3.9669 -;-;-;-;-;-;-;-;-;- 3576 1 1.186 165202.6 1.0 7859 5472 13322 HBL1_DMSO_200M_050219_1,13333 HBL1_DMSO_200M_050219_1,13333,RIIDVSTVKEL True True RIIDVSTVKEL 67.283535 636.879748523235 2855497.5 13322.0 nc|ENSG00000076043|Q9Y3B8-2|REXO2;;ENST00000539788.5_1_11:114314891-114320694:+|nuORF;;nc|ENSG00000076043|Q9Y3B8-3|REXO2;;ENST00000538403.5_1_11:114314877-114320694:+|nuORF;;ENST00000543131.5_1_11:114310234-114320694:+|nuORF;;ENST00000539333.5_1_11:114316741-114316810:+|nuORF;;ENSG00000076043|ENST00000265881|REXO2;;ENST00000538791.3_1_11:114315223-114320694:+|nuORF 6.542151927947998 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13334 67.296 706.0 137270.0 25 0 4146.2 -1 0 122 902.9175908603607 1803.8206287875216 2 903.4144775271416 MULTI CID FTMS 0 0 0 13322 128940.3515625 0.1865384620601094 -5 0.3399887084960937 12 3 [MN]PN{I|L}NEEQYV 11 -1 66.992 0.0 0.0 3.7139 0.0 0.0 0.0 469.2100008600219 469.2100008600219 19.77652772163192 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.8494850021680094 [MN]PN{I|L}NEEQYV 3.7139 - 3204 + 1 1.186 67763.1 1.0 7860 5472 13322 HBL1_DMSO_200M_050219_1,13334 HBL1_DMSO_200M_050219_1,13334, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13335 67.307 643.0 271670.0 25 0 18448.0 13709 HQLTEVGTMNI 11 170 621.8112050243666 1241.607857115533 2 621.8127319216728 MULTI CID FTMS 0 0 0 13322 103362.0078125 0.1942337420075511 -2 0.1363143920898437 13 Unmodified _HQLTEVGTMNI_ ENSG00000105552|ENST00000316273|BCAT2;ENST00000599510.1_1_19:49299609-49300643:-|nuORF;nc|ENSG00000105552|O15382-2|BCAT2 107.5634045930896 0.009905022604853 3 [HQ]{I|L}TEVGTMN{I|L} 11 0 + 93.713 0.0 0.0 7.5477 7.5477 83.326 0.0 0.0 0.0 1.8015947088364896 10.31167297814416 1.8015947088364896 1.8015947088364896 0 0.7887254899964358 0.0 2.5356668758921828 0.6549471895720985 + + [HQ]{I|L}TEVGTMN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PG]PEVGTMN{I|L};[HQ]{I|L}TEVGTMGG{I|L};[HQ]{I|L}TERTMN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PG]PEVGTMGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PG]PERTMN{I|L};[VG][EP]PEVGTMN{I|L};[VS][RH]EVGTMN{I|L};[{I|L}P][DG]PEVGTMN{I|L};[EP]RPEVGTMN{I|L} 7.5477;7.4026;6.8125;6.676;6.6699;6.528;6.3959;6.345;6.0897;6.0223 +;-;-;-;-;-;-;-;-;- + 9500 1 1.186 131088.9 1.0 7861 5472 13322 HBL1_DMSO_200M_050219_1,13335 HBL1_DMSO_200M_050219_1,13335,HQLTEVGTMNI True True HQITEVGTMNL 67.307031 621.812731921673 5013110.0 13322.0 nc|ENSG00000060982|P54687-2|BCAT1;;nc|ENSG00000060982|P54687-4|BCAT1;;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;;nc|ENSG00000060982|P54687-5|BCAT1;;nc|ENSG00000060982|P54687-3|BCAT1;;ENSG00000060982|ENST00000261192|BCAT1 6.717504342397054 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13336 67.311 166.0 845090.0 25 0 144160.0 + 5860 DPWRIRQI 8 129 361.8734745642651 1082.5985942929954 3 361.8738891482353 MULTI CID FTMS 0 0 0 13322 89769.5703125 0.1026338805041855 -2 0.1363143920898437 14 Unmodified _DPWRIRQI_ ENSG00000164941|ENST00000523731|INTS8;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8 30.22481116460888 0.4082965392918993 3 DPWR{I|L} 5 3 57.691 0.0 0.0 5.3289 0.0 0.0 0.0 412.2312716119751 412.2312716119751 47.31217167963049 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.7742275032520141 + DPWR{I|L} 5.3289 + + 88 + 1 1.186 118144.5 1.0 7862 5472 13322 HBL1_DMSO_200M_050219_1,13336 HBL1_DMSO_200M_050219_1,13336,DPWRIRQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13337 67.325 784.0 96737.0 25 0 21431.0 -1 0 86 1053.9701834571504 2105.925813981101 2 1054.466479480267 MULTI CID FTMS 0 0 0 13322 79286.6875 0.477096653209402 -1 0.0431060791015625 15 3 [QP]SVEA{I|L} 7 -1 37.312 0.0 0.0 1.7718 0.0 0.0 0.0 1378.5250284680512 1378.5250284680512 13.772751543907532 0.0 0.0 0.0 0 0.0 0.0 1.035666875892183 0.0 [QP]SVEA{I|L} 1.7718 - 1863 1 1.186 57819.4 1.0 7863 5472 13322 HBL1_DMSO_200M_050219_1,13337 HBL1_DMSO_200M_050219_1,13337, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13339 67.329 2.0 29383000.0 25 0 3797900.0 + 32362 RYPTSIASL 9 73 504.27971494636216 1006.5448769595243 2 504.2798644900322 MULTI CID FTMS 0 0 0 13338 27437770.0 0.5272469714079014 -1 0.123443603515625 1 Unmodified _RYPTSIASL_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 57.72198328787511 0.0273433238377839 3 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 5 + 78.533 0.0 0.0 7.8023 7.8023 89.415 0.0 0.0 0.0 6.020599913279625 9.203103093438967 6.020599913279625 6.020599913279625 0 1.274227503252014 1.5228787452803376 1.4698565171985376 0.0 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L};[YR][TP]S{I|L}AS{I|L};[YR]{[VA]|[{I|L}G]}D{I|L}AS{I|L};[{M(Oxidation (M))|F}V]A{I|L}{[WT]|[RM]}AS{I|L};[YR]{[VA]|[{I|L}G]}S{I|L}AD{I|L};[{M(Oxidation (M))|F}V]A{I|L}S[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{M(Oxidation (M))|F}V]A{I|L}S{[RE]|[WV]}[VS] 7.8023;7.2041;7.1815;7.0503;4.3511;4.159;2.8112;2.2506 -;-;+;-;-;-;-;- + 291 1 1.179 50071.9 1.0 7864 5473 13338 HBL1_DMSO_200M_050219_1,13339 HBL1_DMSO_200M_050219_1,13339,RYPTSIASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13340 67.33 13.0 2320500.0 25 0 224590.0 + 12993 HALRMLQSI 9 60 534.8022018123282 1067.5898506914564 2 534.8031494021416 MULTI CID FTMS 0 0 0 13338 2889663.0 0.4409176918181309 2 -0.0961380004882812 2 Unmodified _HALRMLQSI_ ENSG00000185988|ENST00000454744|PLK5;nc|ENSG00000185988|Q496M5-2|PLK5 30.63653989081413 0.1413794767160703 3 HA{M(Oxidation (M))|F} 3 6 43.672 0.0 0.0 4.0907 0.0 0.0 0.0 709.3825777643186 709.3825777643186 22.11494743906186 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 HA{M(Oxidation (M))|F} 4.0907 - 56 + 1 1.179 29241.7 1.0 7865 5473 13338 HBL1_DMSO_200M_050219_1,13340 HBL1_DMSO_200M_050219_1,13340,HALRMLQSI False True HALRMLQSI 67.330439 534.803149402142 154112387.0 13338.0 nc|ENSG00000185988|Q496M5-2|PLK5;;ENSG00000185988|ENST00000454744|PLK5 4.31776229540507 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13341 67.332 6.1 8952400.0 25 0 1231300.0 21068 LPAGGILVF 9 69 443.7734746181057 885.5323963030114 2 443.7735473513603 MULTI CID FTMS 0 0 0 13338 9441764.0 0.3092426967344635 -13 1.0216522216796875 3 Unmodified _LPAGGILVF_ ENSG00000150990|ENST00000308736|DHX37 20.871210003555333 0.2717241269066626 3 {I|L}P 2 7 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.372681663268 672.372681663268 18.3888594289104 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 98 + 1 1.179 48093.8 1.0 7866 5473 13338 HBL1_DMSO_200M_050219_1,13341 HBL1_DMSO_200M_050219_1,13341,LPAGGILVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13342 67.333 9.1 2884100.0 25 0 322750.0 + 12793 KQVSDLISV 9 57 494.283846618593 986.553140303986 2 494.7862426638603 MULTI CID FTMS 0 0 0 13338 3838485.75 0.6784184969541309 -1 0.123443603515625 4 Unmodified _GVRSNGLVSV_ ENST00000581230.5_1_17:62496043-62497015:-|nuORF;ENSG00000108654|ENST00000225792|DDX5;nc|ENSG00000108654|P17844-2|DDX5 7.289230182591677 0.6929195370588109 3 SV 2 8 21.013 0.0 0.0 2.13 0.0 0.0 782.4415813213673 0.0 782.4415813213673 0.0 14.559771852360797 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + SV 2.13 + + 26 + 1 1.179 26914.3 1.0 7867 5473 13338 HBL1_DMSO_200M_050219_1,13342 HBL1_DMSO_200M_050219_1,13342,GVRSNGLVSV False False KQVSDLISV 67.332797 494.78624266386 47485220.0 13338.0 ENST00000581230.5_1_17:62496043-62497015:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5 0.925361712773641 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13343 67.334 24.0 2641200.0 25 0 574550.0 + 36330 SYNDYVREF 9 56 596.7670314957832 1191.5195100583662 2 596.7675048708916 MULTI CID FTMS 0 0 0 13338 2543362.25 0.6602749018539127 -1 0.123443603515625 5 Unmodified _SYNDYVREF_ ENSG00000083896|ENST00000344157|YTHDC1;nc|ENSG00000083896|Q96MU7-2|YTHDC1 32.037481411007896 0.1235546156350648 3 {[{M(Oxidation (M))|F}C]|[YS]}NDYV{[RE]|[WV]}{M(Oxidation (M))|F} 9 0 + 51.827 0.0 0.0 4.3497 4.3497 79.761 0.0 0.0 0.0 40.04425523106457 6.86114487386515 6.86114487386515 6.817496819840656 0 1.2302046884880935 0.0 0.0 0.805462187404089 + + {[{M(Oxidation (M))|F}C]|[YS]}NDYV{[RE]|[WV]}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}N{M(Oxidation (M))|F}MV{[RE]|[WV]}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}GGDYV{[RE]|[WV]}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}NMV{[RE]|[WV]}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}GG{M(Oxidation (M))|F}MV{[RE]|[WV]}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}GGMV{[RE]|[WV]}{M(Oxidation (M))|F} 4.3497;3.7775;3.5768;3.1684;3.0047;2.3956 +;-;-;-;-;- + 93 + 1 1.179 51740.5 1.0 7868 5473 13338 HBL1_DMSO_200M_050219_1,13343 HBL1_DMSO_200M_050219_1,13343,SYNDYVREF True True SYNDYVREF 67.333974 596.767504870892 88449372.0 13338.0 ENSG00000083896|ENST00000344157|YTHDC1;;nc|ENSG00000083896|Q96MU7-2|YTHDC1 12.665372530619305 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13344 67.335 22.0 1556800.0 25 0 206870.0 -1 FYAMYNTLVA 10 59 604.7856039046939 1207.5566548761876 2 604.7864868044853 MULTI CID FTMS 0 0 0 13338 2364517.5 0.6244287555698395 -1 0.123443603515625 6 Oxidation (M) _FYAM(Oxidation (M))YNTLVA_ ENSG00000154864|ENST00000674853|PIEZO2;nc|ENSG00000154864|Q9H5I5-2|PIEZO2;nc|ENSG00000154864|Q9H5I5-4|PIEZO2;nc|ENSG00000154864|Q9H5I5|PIEZO2 13.90604991867851 0.6142120002215601 3 V{I|L}{I|L}{[VA]|[{I|L}G]} 5 -1 25.713 0.0 0.0 2.1294 0.0 0.0 694.2055531232437 0.0 694.2055531232437 0.0 11.020599913279623 0.0 0.0 0 0.5 0.0 0.0 0.0 V{I|L}{I|L}{[VA]|[{I|L}G]} 2.1294 - 44 1 1.179 30723.5 1.0 7869 5473 13338 HBL1_DMSO_200M_050219_1,13344 HBL1_DMSO_200M_050219_1,13344,FYAMYNTLVA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13345 67.336 16.0 5883900.0 25 0 621060.0 + 41973 VQLQIGMAL 9 103 486.7831341259952 971.5517153187903 2 486.7827026247978 MULTI CID FTMS 0 0 0 13338 1995097.125 0.6586986036847192 -1 0.123443603515625 7 Unmodified _VQLQIGMAL_ REV__nc|ENSG00000188487|Q1MX18-6|INSC 8.593279151180031 0.6146971463335029 3 {I|L} 1 -1 11.99 0.0 0.0 1.2341 0.0 0.0 840.4566816047263 0.0 840.4566816047263 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2341 + + 55 + 1 1.179 78554.8 1.0 7870 5473 13338 HBL1_DMSO_200M_050219_1,13345 HBL1_DMSO_200M_050219_1,13345,VQLQIGMAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13346 67.338 35.0 2412500.0 25 0 240510.0 + 21769 LPNAPKALI 9 95 468.7971129212361 935.5796729092722 2 468.7976257205009 MULTI CID FTMS 0 0 0 13338 1691825.125 0.5283289884295859 -1 0.123443603515625 8 Unmodified _LPNAPKALI_ ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 61.357469665136826 0.0253304979873734 3 {I|L}PNA 4 5 55.962 0.0 0.0 5.9815 0.0 0.0 0.0 537.3417455041334 537.3417455041334 19.027975134029653 0.0 0.0 0.0 0 1.0044321917401078 1.6989700043360187 0.0 0.0 + {I|L}PNA 5.9815 + + 857 + 1 1.179 68798.5 1.0 7871 5473 13338 HBL1_DMSO_200M_050219_1,13346 HBL1_DMSO_200M_050219_1,13346,LPNAPKALI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13347 67.339 29.0 2733800.0 25 0 232800.0 + 2964 AVIDVGINRV 10 89 528.3142700001846 0 528.3143188357353 PEAK CID FTMS 0 0 0 13338 1192867.875 0.0239007842689853 -4 0.3442306518554687 9 Unmodified _AVIDVGINRV_ ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2 38.17557092003332 0.1299896074792053 3 {I|L}DVVA 5 7 38.588 0.0 0.0 3.659 0.0 0.0 170.10470392150222 384.2002352350219 554.3049391565241 0.0 0.0 0.0 0.0 0 1.2134679910804405 0.0 0.0 0.0 {I|L}DVVA 3.659 - 364 + 1 1.179 67181.0 1.0 7872 5473 13338 HBL1_DMSO_200M_050219_1,13347 HBL1_DMSO_200M_050219_1,13347,AVIDVGINRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13348 67.34 30.0 1171800.0 25 0 134610.0 + 3942 DALLIHDTV 9 72 498.77208941388346 995.529625894567 2 498.7722656130791 MULTI CID FTMS 0 0 0 13338 1041405.4375 0.5393028004474834 -1 0.123443603515625 10 Unmodified _DALLIHDTV_ ENSG00000108771|ENST00000251642|DHX58;ENST00000586522.5_1_17:40255624-40263910:-|nuORF;ENST00000590637.1_1_17:40257054-40259850:-|nuORF 30.63653989081413 0.1413794767160703 3 {[DA]|[EG]}{I|L}{I|L}{I|L}[HD]TV 9 0 + 48.492 0.0 0.0 4.871 4.871 88.033 0.0 0.0 0.0 35.51648126128587 0.7891383356267667 0.7891383356267667 48.49217589683061 0 0.8494850021680094 2.0 0.3054621874040891 0.0 + + {[DA]|[EG]}{I|L}{I|L}{I|L}[HD]TV 4.871 + + 174 + 1 1.179 36610.6 1.0 7873 5473 13338 HBL1_DMSO_200M_050219_1,13348 HBL1_DMSO_200M_050219_1,13348,DALLIHDTV False True DALLIHDTV 67.339868 498.772265613079 8696574.0 13338.0 ENST00000590637.1_1_17:40257054-40259850:-|nuORF;;ENST00000586522.5_1_17:40255624-40263910:-|nuORF;;ENSG00000108771|ENST00000251642|DHX58 8.194111665089926 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13349 67.341 40.0 1576900.0 25 0 200500.0 + 15323 IPLMPFPP 8 105 456.2569667334189 0 456.2566711306572 PEAK CID FTMS 0 0 0 13338 1031869.1875 0.5025721733930644 -4 0.3442306518554687 11 Unmodified _IPLMPFPP_ REV__ENST00000528175.1_1_8:144803765-144804224:+|nuORF 6.354104778181461 0.5763711549229614 3 M 1 -1 3.9794 0.0 0.0 0.43706 0.0 0.0 520.308933611566 256.13535486392817 776.4442884754942 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.43706 + + 6 + 1 1.179 52811.2 1.0 7874 5473 13338 HBL1_DMSO_200M_050219_1,13349 HBL1_DMSO_200M_050219_1,13349,IPLMPFPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13350 67.343 82.0 1397800.0 25 0 158720.0 + 21023 LNVVRDRG 8 110 464.7697386076133 927.5249242820264 2 464.7701599001884 MULTI CID FTMS 0 0 0 13338 762964.125 0.5019180932136316 -1 0.123443603515625 12 Unmodified _LNVVRDRG_ REV__ENSG00000065183|ENST00000349139|WDR3 4.75600775471527 0.7954636275367004 3 V 1 -1 10.713 0.0 0.0 1.155 0.0 0.0 810.4453858682555 0.0 810.4453858682555 0.0 0.2287874528033739 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.155 + + 28 + 1 1.179 92514.4 1.0 7875 5473 13338 HBL1_DMSO_200M_050219_1,13350 HBL1_DMSO_200M_050219_1,13350,LNVVRDRG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13351 67.345 95.0 794850.0 25 0 121440.0 41387 VPKVPGVL 8 87 404.7682930862987 807.5220332393974 2 404.7681457400322 MULTI CID FTMS 0 0 0 13338 699109.0625 0.0740980303385688 -4 0.3442306518554687 13 Unmodified _VPKVPGVL_ ENST00000309859.8_1_16:23503092-23504756:-|nuORF 32.116972079565 0.368454113111938 3 [VP]GVKPV{I|L} 8 3 + 71.151 0.0 0.0 8.8111 8.8111 91.446 0.0 0.0 0.0 22.21848749616356 64.16177220240947 22.21848749616356 6.53212513775344 0 1.3807196863200843 1.5228787452803376 0.0 0.0 [VP]GVKPV{I|L};[VP]KVGPV{I|L};[VP]GVPKV{I|L};[VP]GPVKV{I|L} 8.8111;8.0022;7.2283;6.5545 -;-;-;- 193 1 1.179 64771.9 1.0 7876 5473 13338 HBL1_DMSO_200M_050219_1,13351 HBL1_DMSO_200M_050219_1,13351,VPKVPGVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13352 67.346 61.0 605930.0 25 0 100400.0 24293 MAYFDPDFY 9 73 584.7358201957762 1167.4570874583524 2 584.7363159060478 MULTI CID FTMS 0 0 0 13338 680475.6875 0.5094527258425946 2 -0.0961380004882812 14 Unmodified _MAYFDPDFY_ ENSG00000138018|ENST00000260585|SELENOI;ENST00000260585.11_1_2:26569100-26611935:+|nuORF 5.230669730166228 0.7320841359114558 3 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]}{I|L} 8 5 19.938 0.0 0.0 1.7079 0.0 0.0 0.0 197.95885063647955 197.95885063647955 9.559815949780807 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5 0.8494850021680094 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]}{I|L} 1.7079 - 139 1 1.179 35899.8 1.0 7877 5473 13338 HBL1_DMSO_200M_050219_1,13352 HBL1_DMSO_200M_050219_1,13352,MAYFDPDFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13353 67.348 40.0 1095300.0 25 0 129700.0 23104 LSNVFDHVV 9 84 515.2725529370667 1028.5305529409334 2 515.2720825076103 MULTI CID FTMS 0 0 0 13338 729945.875 0.4978949588831047 -1 0.123443603515625 15 Unmodified _LSNVFDHVV_ ENSG00000205832|ENST00000444310|C16orf96 18.1463463914782 0.3454829746528889 3 MEVV 4 7 33.928 0.0 0.0 3.2987 0.0 0.0 552.3038221436462 0.0 552.3038221436462 0.0 12.95880017344075 0.0 0.0 0 0.5 0.0 0.0 0.0 MEVV 3.2987 - 74 1 1.179 41223.6 1.0 7878 5473 13338 HBL1_DMSO_200M_050219_1,13353 HBL1_DMSO_200M_050219_1,13353,LSNVFDHVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13354 67.349 54.0 1215300.0 25 0 168990.0 + 12637 GVLDKLRSV 9 82 329.5380112990971 985.5922044974914 3 329.5377990603447 MULTI CID FTMS 0 0 0 13338 578520.1875 0.3734935291356751 -1 0.123443603515625 16 Unmodified _GVLDKLRSV_ ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-10|ZC3H14;nc|ENSG00000100722|Q6PJT7-11|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;nc|ENSG00000100722|Q6PJT7-3|ZC3H14;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;nc|ENSG00000100722|Q6PJT7-9|ZC3H14 24.99096001346401 0.2132109383330889 3 [VG]{I|L}DK{I|L} 6 3 57.778 0.0 0.0 5.8623 0.0 0.0 0.0 357.1899813287719 357.1899813287719 48.24530224210041 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.4247425010840047 0.4247425010840047 + [VG]{I|L}DK{I|L} 5.8623 + + 90 + 1 1.179 59727.4 1.0 7879 5473 13338 HBL1_DMSO_200M_050219_1,13354 HBL1_DMSO_200M_050219_1,13354,GVLDKLRSV False True GVLDKLRSV 67.349039 329.537799060345 36508027.0 13338.0 nc|ENSG00000100722|Q6PJT7-11|ZC3H14;;nc|ENSG00000100722|Q6PJT7-10|ZC3H14;;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;;nc|ENSG00000100722|Q6PJT7-3|ZC3H14;;nc|ENSG00000100722|Q6PJT7-9|ZC3H14;;ENSG00000100722|ENST00000251038|ZC3H14 4.905723889668782 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13355 67.35 44.0 539340.0 25 0 59135.0 33617 SIQNGKDSTAP 11 59 559.2765362781845 0 559.2798339724541 PEAK CID FTMS 0 0 0 13338 546715.9375 0.6010189788994017 -1 0.123443603515625 17 Unmodified _SIQNGKDSTAP_ nc|ENSG00000072518|Q7KZI7-10|MARK2;nc|ENSG00000072518|Q7KZI7-13|MARK2;nc|ENSG00000072518|Q7KZI7-15|MARK2;nc|ENSG00000072518|Q7KZI7-16|MARK2;nc|ENSG00000072518|Q7KZI7-2|MARK2;nc|ENSG00000072518|Q7KZI7-4|MARK2;nc|ENSG00000072518|Q7KZI7-5|MARK2;nc|ENSG00000072518|Q7KZI7-7|MARK2;nc|ENSG00000072518|Q7KZI7-9|MARK2 8.745405648335112 0.4618489994582195 3 QD 2 9 9.6927 0.0 0.0 0.86811 0.0 0.0 788.3634230428939 82.06697260074452 870.4303956436385 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 QD 0.86811 - 17 + 1 1.179 26889.9 1.0 7880 5473 13338 HBL1_DMSO_200M_050219_1,13355 HBL1_DMSO_200M_050219_1,13355,SIQNGKDSTAP False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13356 67.353 128.0 543380.0 25 0 38054.0 8217 EPVVFPEEPEI 11 98 642.819184784058 1283.623816634916 2 642.8191406130791 MULTI CID FTMS 0 0 0 13338 463196.28125 0.5373680125265062 -1 0.123443603515625 18 Unmodified _EPVVFPEEPEI_ ENSG00000004660|ENST00000348335|CAMKK1;nc|ENSG00000004660|Q8N5S9-2|CAMKK1 29.081581746732265 0.4093582134107448 3 [EP]SANVETV 9 8 63.584 0.0 0.0 4.9535 0.0 0.0 0.0 354.1676487947605 354.1676487947605 37.39365189542078 0.0 0.0 0.0 0 0.5 1.5228787452803376 1.2198565171985374 0.7614393726401688 [EP]SANVETV 4.9535 - 1110 1 1.179 60557.6 1.0 7881 5473 13338 HBL1_DMSO_200M_050219_1,13356 HBL1_DMSO_200M_050219_1,13356,EPVVFPEEPEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13357 67.355 96.0 729230.0 25 0 87647.0 + 18225 KVFGNEIKL 9 98 349.8780835611659 1046.6124212836978 3 349.8781310915947 MULTI CID FTMS 0 0 0 13338 426322.0 0.5724424410664295 -1 0.123443603515625 19 Unmodified _KVFGNEIKL_ ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF;ENST00000494618.1_1_2:232322276-232325237:-|nuORF 20.453626601364224 0.2830276176381075 3 KV{M(Oxidation (M))|F}G{M(Oxidation (M))|F}K 6 4 33.933 0.0 0.0 3.2421 0.0 0.0 322.2209167955115 0.0 322.2209167955115 0.0 18.92236356157297 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 KV{M(Oxidation (M))|F}G{M(Oxidation (M))|F}K 3.2421 - 132 + 1 1.179 61116.9 1.0 7882 5473 13338 HBL1_DMSO_200M_050219_1,13357 HBL1_DMSO_200M_050219_1,13357,KVFGNEIKL False True KVFGNEIKL 67.354989 349.878131091595 3432364.25 13338.0 ENST00000461347.5_1_2:232323706-232327997:-|nuORF;;ENST00000494618.1_1_2:232322276-232325237:-|nuORF;;ENSG00000115053|ENST00000322723|NCL 0.8621265490849813 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13358 67.357 71.0 574810.0 25 0 75136.0 + 34166 SLMKDFPGA 9 75 483.2412249842767 964.4678970353534 2 483.2412292361259 MULTI CID FTMS 0 0 0 13338 324777.9375 0.4012815347837378 -1 0.123443603515625 20 Unmodified _SLMKDFPGA_ ENSG00000079819|ENST00000337057|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2 18.1463463914782 0.3454829746528889 3 {[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}M{M(Oxidation (M))|F}[QP] 8 4 + 45.463 0.0 0.0 4.7138 4.7138 76.368 0.0 0.0 0.0 13.4209190344287 5.2827377716704405 5.2827377716704405 3.0102999566398125 0 0.8807196863200843 2.0 0.0 0.0 {[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}M{M(Oxidation (M))|F}[QP];{[TV]|[{I|L}S]}M[YQ]V[QP];{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}M{M(Oxidation (M))|F}[PG]A;{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}M[QP];{[TV]|[{I|L}S]}M[YQ]V[PG]A;{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}M[PG]A;{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}M{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{[TV]|[{I|L}S]}{[CA]|SS}{M(Oxidation (M))|F}TV[QP];{[TV]|[{I|L}S]}M[KS][WD]V;{[TV]|[{I|L}S]}M[YQ][QP]V 4.7138;4.4016;4.166;4.0895;3.8539;3.5418;3.3885;3.3222;3.0764;3.0764 -;-;-;-;-;-;-;-;-;- 180 + 1 1.179 36528.7 1.0 7883 5473 13338 HBL1_DMSO_200M_050219_1,13358 HBL1_DMSO_200M_050219_1,13358,SLMKDFPGA False True SLMKDFPGA 67.356658 483.241229236126 2040643.75 13338.0 nc|ENSG00000079819|O43491-3|EPB41L2;;nc|ENSG00000079819|O43491-2|EPB41L2;;nc|ENSG00000079819|O43491-4|EPB41L2;;ENSG00000079819|ENST00000337057|EPB41L2 5.604756514231364 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13360 67.361 3.7 11249000.0 25 0 1302000.0 + 21906 LPPHIIRL 8 57 320.21154587615865 957.612808228676 3 320.2113220095634 MULTI CID FTMS 0 0 0 13359 18154896.0 1.0 0 0.0 1 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 17.11289562659939 0.6581031263288403 3 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 0 + 59.105 0.0 0.0 6.1721 6.1721 92.593 0.0 0.0 0.0 55.12578788640525 3.979400086720375 3.979400086720375 59.10518797312562 0 0.0 1.3979400086720375 0.0 0.0 + + {I|L}PPH{I|L}{I|L}[R{I|L}] 6.1721 + + 40 + 1 1.179 39844.6 1.0 7884 5474 13359 HBL1_DMSO_200M_050219_1,13360 HBL1_DMSO_200M_050219_1,13360,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13361 67.362 4.9 4833600.0 25 0 615540.0 4700 DDIGLVSL 8 52 416.2266014676928 830.4386500021856 2 416.2265807986259 MULTI CID FTMS 0 0 0 13359 13788752.0 1.0 0 0.0 2 Unmodified _DDIGLVSL_ ENSG00000100485|ENST00000216373|SOS2;nc|ENSG00000100485|Q07890-2|SOS2 14.581692164780916 0.6954967302934248 3 R{I|L} 2 7 15.573 0.0 0.0 1.8753 0.0 0.0 543.2453649453481 0.0 543.2453649453481 0.0 6.90105620855803 0.0 0.0 0 0.0 0.0 0.0 0.0 R{I|L} 1.8753 - 23 + 1 1.179 25853.5 1.0 7885 5474 13359 HBL1_DMSO_200M_050219_1,13361 HBL1_DMSO_200M_050219_1,13361,DDIGLVSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13362 67.363 11.0 3122100.0 25 0 565600.0 + 41848 VPYLFKKV 8 59 331.87596361904207 992.6060614573262 3 331.8756896853447 MULTI CID FTMS 0 0 0 13359 5240765.5 1.0 0 0.0 3 Unmodified _VPYLFKKV_ ENSG00000100395|ENST00000216237|L3MBTL2;ENST00000466589.5_1_22:41601366-41623356:+|nuORF;ENST00000479978.5_1_22:41615341-41623356:+|nuORF;nc|ENSG00000100395|Q969R5-2|L3MBTL2;nc|ENSG00000100395|Q969R5-3|L3MBTL2 15.847184025352805 0.6768015514314958 3 VPY{I|L}{M(Oxidation (M))|F}K{[QV]|[N{I|L}]|[RA]|[KV]} 8 0 + 36.095 0.0 0.0 3.6364 3.6364 83.702 0.0 0.0 0.0 10.408525658075687 3.979400086720375 3.979400086720375 27.220938031831565 0 0.0 0.0 0.0 0.0 + + VPY{I|L}{M(Oxidation (M))|F}K{[QV]|[N{I|L}]|[RA]|[KV]};V[{I|L}T]Y[K{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.6364;0.89401 +;- + 59 + 1 1.179 38415.5 1.0 7886 5474 13359 HBL1_DMSO_200M_050219_1,13362 HBL1_DMSO_200M_050219_1,13362,VPYLFKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13363 67.364 24.0 534070.0 25 0 39875.0 + 15654 IQLILMFII 9 39 552.3485027807335 0 552.3484985232353 PEAK CID FTMS 0 0 0 13359 3191015.5 1.0 0 0.0 4 Unmodified _IQLILMFII_ REV__ENSG00000174125|ENST00000308979|TLR1 0.6014990680409731 0.3444685223463735 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.179 19000.7 1.0 7887 5474 13359 HBL1_DMSO_200M_050219_1,13363 HBL1_DMSO_200M_050219_1,13363,IQLILMFII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13364 67.365 19.0 1224400.0 25 0 99301.0 42486 VTIKMIFAI 9 64 518.317002642227 1034.6194523512538 2 518.3174316287041 MULTI CID FTMS 0 0 0 13359 2540323.0 1.0 0 0.0 5 Unmodified _VTIKMIFAI_ ENSG00000186867|ENST00000394427|QRFPR 5.230669730166228 0.7320841359114558 3 {I|L} 1 8 13.979 0.0 0.0 1.3512 0.0 0.0 903.524449154768 0.0 903.524449154768 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3512 + + 6 + 1 1.179 23809.5 1.0 7888 5474 13359 HBL1_DMSO_200M_050219_1,13364 HBL1_DMSO_200M_050219_1,13364,VTIKMIFAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13365 67.367 24.0 1406900.0 25 0 123520.0 + 41850 VPYLFKKV 8 60 497.3107393760554 992.6069258189108 2 497.3104125857353 MULTI CID FTMS 0 0 0 13359 2353334.75 1.0 0 0.0 6 Unmodified _VPYLFKKV_ ENSG00000100395|ENST00000216237|L3MBTL2;ENST00000466589.5_1_22:41601366-41623356:+|nuORF;ENST00000479978.5_1_22:41615341-41623356:+|nuORF;nc|ENSG00000100395|Q969R5-2|L3MBTL2;nc|ENSG00000100395|Q969R5-3|L3MBTL2 28.486842064014134 0.4448922141344407 3 VPY{I|L}{M(Oxidation (M))|F}KKV 8 0 + 57.306 0.0 0.0 5.7733 5.7733 91.309 0.0 0.0 0.0 31.364138208439485 8.927900303521312 8.927900303521312 57.306263179086514 0 0.3252574989159953 1.3010299956639813 0.0 0.0 + + VPY{I|L}{M(Oxidation (M))|F}KKV 5.7733 + + 64 + 1 1.179 32498.5 1.0 7889 5474 13359 HBL1_DMSO_200M_050219_1,13365 HBL1_DMSO_200M_050219_1,13365,VPYLFKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13366 67.368 35.0 1089900.0 25 0 171370.0 + 23842 LVHDLFQKV 9 74 366.8818381402533 1097.6236850209598 3 366.8815490603447 MULTI CID FTMS 0 0 0 13359 1428503.625 1.0 0 0.0 7 Unmodified _LVHDLFQKV_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 13.90604991867851 0.4602628045680013 3 [HV]D{I|L}{I|L} 5 5 24.882 0.0 0.0 2.2669 0.0 0.0 0.0 517.2752712848848 517.2752712848848 17.892587542690922 0.0 0.0 0.0 0 0.4247425010840047 0.9208187539523752 0.0 0.0 [HV]D{I|L}{I|L} 2.2669 - 74 1 1.179 41183.6 1.0 7890 5474 13359 HBL1_DMSO_200M_050219_1,13366 HBL1_DMSO_200M_050219_1,13366,LVHDLFQKV False True LVHDLFQKV 67.367841 366.881549060345 3098619.5 13359.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 1.7861230373382568 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13367 67.369 29.0 984420.0 25 0 118050.0 + 44793 YPMRIDESI 9 46 562.2759418152597 1122.5373306973192 2 562.2762939333916 MULTI CID FTMS 0 0 0 13359 1385636.125 1.0 0 0.0 8 Unmodified _YPMRIDESI_ ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L 21.53697664764585 0.2571576504437394 3 YPSY 4 6 39.385 0.0 0.0 3.5086 0.0 0.0 0.0 609.2831514947874 609.2831514947874 16.18440000316717 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 YPSY 3.5086 - 27 + 1 1.179 29803.5 1.0 7891 5474 13359 HBL1_DMSO_200M_050219_1,13367 HBL1_DMSO_200M_050219_1,13367,YPMRIDESI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13368 67.371 77.0 431560.0 25 0 73036.0 12326 GSKKLVVA 8 59 401.2621527197091 800.5097525062182 2 401.2621032595634 MULTI CID FTMS 0 0 0 13359 1300674.0 1.0 0 0.0 9 Unmodified _GSKKLVVA_ ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1 2.302733041254933 0.8103549651115762 3 {I|L}{I|L}R 3 7 15.406 0.0 0.0 1.9245 0.0 0.0 400.2291717398798 0.0 400.2291717398798 0.0 4.921525057367406 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}R 1.9245 - 15 + 1 1.179 35598.6 1.0 7892 5474 13359 HBL1_DMSO_200M_050219_1,13368 HBL1_DMSO_200M_050219_1,13368,GSKKLVVA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13369 67.372 47.0 644450.0 25 0 99282.0 + -1 LSMMRWKSL 9 60 584.3036149162995 1166.5926768993988 2 584.3033935427666 MULTI CID FTMS 0 0 0 13359 996823.375 0.3604808208846869 3 -0.2412185668945312 10 Oxidation (M) _LSM(Oxidation (M))MRWKSL_ REV__ENSG00000104312|ENST00000220751|RIPK2;REV__ENST00000522965.1_1_8:90770176-90802641:+|nuORF;REV__nc|ENSG00000104312|O43353-2|RIPK2 10.823927491677226 0.5436922275383211 3 {[TV]|[{I|L}S]}T 3 -1 33.2 0.0 0.0 2.8459 0.0 0.0 0.0 862.3979586236936 862.3979586236936 19.841284356197235 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}T 2.8459 - 19 + 1 1.179 31040.4 1.0 7893 5474 13359 HBL1_DMSO_200M_050219_1,13369 HBL1_DMSO_200M_050219_1,13369,LSMMRWKSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13370 67.376 231.0 284660.0 25 0 27610.0 -1 0 72 975.4161513047428 1948.8177496762853 2 975.9197265505792 MULTI CID FTMS 0 0 0 13359 955210.25 1.0 0 0.0 11 3 [YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}[RH][HQ] 14 -1 + 49.636 0.0 0.0 2.547 2.547 74.004 0.0 0.0 0.0 5.1329657522032335 5.1329657522032335 5.1329657522032335 5.1329657522032335 0 0.0 0.9208187539523752 0.3494850021680094 0.7302046884880937 [YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}[RH][HQ];{[RE]|[WV]}[YQ]{I|L}ENYC(Carbamidomethyl (C))C(Carbamidomethyl (C))E{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WP];{[RE]|[WV]}[YQ]KNNYC(Carbamidomethyl (C))C(Carbamidomethyl (C))E{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNNKHH{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNNK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}[RH][HK];{[SA]|[TG]}V{M(Oxidation (M))|F}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}[RH][HQ];[Q{I|L}]YEC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}[RH][HQ] 2.547;2.2836;2.2773;2.2132;1.9338;1.9275;1.8634;1.5987;1.4661;1.4055 -;-;-;-;-;-;-;-;-;- 460 1 1.179 52746.0 1.0 7894 5474 13359 HBL1_DMSO_200M_050219_1,13370 HBL1_DMSO_200M_050219_1,13370, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13371 67.378 47.0 782010.0 25 0 86737.0 45010 YPTALRSL 8 71 460.76359746172113 919.5126419902424 2 460.7641174197197 MULTI CID FTMS 0 0 0 13359 639328.625 0.3195396720566684 -5 0.3757400512695312 12 Unmodified _YPTALRSL_ ENSG00000204052|ENST00000372441|LRRC73 14.581692164780916 0.6954967302934248 3 {I|L}PD[PS]P{I|L}D 8 7 27.406 0.0 0.0 2.9805 0.0 0.0 0.0 82.06693445377186 82.06693445377186 2.9687208689685285 0.0 0.0 0.0 0 0.1822333069283654 1.3979400086720375 0.0 0.0 {I|L}PD[PS]P{I|L}D 2.9805 - 93 + 1 1.179 36325.8 1.0 7895 5474 13359 HBL1_DMSO_200M_050219_1,13371 HBL1_DMSO_200M_050219_1,13371,YPTALRSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13372 67.38 124.0 527090.0 25 0 61836.0 + 30379 RALPELTKL 9 94 347.55335517296027 0 347.5533019900322 PEAK CID FTMS 0 0 0 13359 465247.5625 1.0 0 0.0 13 Unmodified _RALPELTKL_ ENSG00000173801|ENST00000393931|JUP 8.745405648335112 0.3266626568796316 3 EQ{I|L} 3 7 7.7917 0.0 0.0 1.1242 0.0 0.0 95.76618192619556 224.11586939029533 319.8820513164909 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EQ{I|L} 1.1242 - 27 + 1 1.179 60892.1 1.0 7896 5474 13359 HBL1_DMSO_200M_050219_1,13372 HBL1_DMSO_200M_050219_1,13372,RALPELTKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13373 67.384 166.0 507250.0 25 0 83110.0 28932 QATFSPIV 8 108 431.7370972915453 861.4596416498905 2 431.7370788455009 MULTI CID FTMS 0 0 0 13359 434710.46875 1.0 0 0.0 14 Unmodified _QATFSPIV_ ENSG00000029534|ENST00000289734|ANK1;ENST00000524227.5_1_8:41525962-41555361:-|nuORF;nc|ENSG00000029534|P16157-10|ANK1;nc|ENSG00000029534|P16157-11|ANK1;nc|ENSG00000029534|P16157-12|ANK1;nc|ENSG00000029534|P16157-13|ANK1;nc|ENSG00000029534|P16157-14|ANK1;nc|ENSG00000029534|P16157-15|ANK1;nc|ENSG00000029534|P16157-16|ANK1;nc|ENSG00000029534|P16157-2|ANK1;nc|ENSG00000029534|P16157-21|ANK1;nc|ENSG00000029534|P16157-4|ANK1;nc|ENSG00000029534|P16157-5|ANK1;nc|ENSG00000029534|P16157-6|ANK1;nc|ENSG00000029534|P16157-7|ANK1;nc|ENSG00000029534|P16157-8|ANK1;nc|ENSG00000029534|P16157-9|ANK1;nc|ENSG00000029534|P16157|ANK1 14.581692164780916 0.6954967302934248 3 V 1 7 14.604 0.0 0.0 1.6953 0.0 0.0 744.3801947888538 0.0 744.3801947888538 0.0 -0.1293988680142472 -0.1293988680142472 0.0 0 0.0 0.0 0.0 0.0 + V 1.6953 + + 73 + 1 1.179 70443.5 1.0 7897 5474 13359 HBL1_DMSO_200M_050219_1,13373 HBL1_DMSO_200M_050219_1,13373,QATFSPIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13374 67.39 331.0 317590.0 25 0 12159.0 + -1 CQRWRQERERE 11 130 816.8930055578305 1631.771458182461 2 816.8948852419853 MULTI CID FTMS 0 0 0 13359 386561.21875 1.0 0 0.0 15 Carbamidomethyl (C) _C(Carbamidomethyl (C))QRWRQERERE_ REV__ENST00000556564.5_1_14:89016912-89021018:-|nuORF 2.0860074813731053 0.8653060162460054 3 MPN{I|L}NEAYVGH{M(Oxidation (M))|F}{I|L}Q 14 -1 + 138.46 0.0 0.0 8.4854 8.4854 91.151 0.0 0.0 0.0 31.89664066244956 15.432349789335888 15.432349789335888 6.667853209646182 0 2.768311523702565 1.5228787452803376 0.3054621874040891 1.3882104921644451 MPN{I|L}NEAYVGH{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NEAYRH{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}GGEAYVGH{M(Oxidation (M))|F}{I|L}Q;MPGG{I|L}NEAYVGH{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NEAY[PS]AAN{I|L}Q;MPN{I|L}GGEAYRH{M(Oxidation (M))|F}{I|L}Q;MPGG{I|L}NEAYRH{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NEAQ{I|L}NT{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NEAY[PS]QQ{I|L}Q;MPN{I|L}NEAYVG{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}Q 8.4854;8.0767;7.9307;7.9307;7.8169;7.5207;7.5207;7.5036;7.4781;7.4601 -;-;-;-;-;-;-;-;-;- 24665 + 1 1.179 74341.9 1.0 7898 5474 13359 HBL1_DMSO_200M_050219_1,13374 HBL1_DMSO_200M_050219_1,13374,CQRWRQERERE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13375 67.396 335.0 184910.0 25 0 11647.0 30575 RERERDRDRDR 11 96 779.9015010284238 1557.7884491236475 2 779.9009277224541 MULTI CID FTMS 0 0 0 13359 362579.875 1.0 0 0.0 16 Unmodified _RERERDRDRDR_ ENSG00000119707|ENST00000261973|RBM25;ENST00000532683.5_1_14:73569902-73577964:+|nuORF;REV__ENSG00000104852|ENST00000598441|SNRNP70;REV__ENSG00000113141|ENST00000417647|IK;REV__ENSG00000145216|ENST00000337488|FIP1L1;REV__ENST00000401730.5_1_19:49606720-49611697:+|nuORF;REV__ENST00000505125.5_1_4:54245288-54325613:+|nuORF;REV__ENST00000513008.5_1_4:54292015-54325613:+|nuORF;REV__ENST00000544278.2_1_19:49607703-49611697:+|nuORF;REV__ENST00000595231.5_1_19:49605423-49611697:+|nuORF;REV__ENST00000601065.5_1_19:49605423-49611697:+|nuORF;REV__nc|ENSG00000104852|P08621-2|SNRNP70;REV__nc|ENSG00000104852|P08621-4|SNRNP70;REV__nc|ENSG00000145216|Q6UN15-3|FIP1L1;REV__nc|ENSG00000145216|Q6UN15-5|FIP1L1 2.498486711656943 0.8633599123570009 3 {[QS]|[NT]}VW{[NV]|[RG]}PSQSTNV{I|L} 14 13 + 59.373 0.0 0.0 3.8114 3.8114 75.298 0.0 0.0 0.0 5.752574989159953 8.639377593260761 5.752574989159953 4.036757287974666 0 0.4564608101803795 0.0 1.548455006504028 0.3494850021680094 {[QS]|[NT]}VW{[NV]|[RG]}PSQSTNV{I|L};{[QS]|[NT]}S[TP]{[NV]|[RG]}PSQSTNV{I|L};[KG]EW{[NV]|[RG]}PSQSTNV{I|L};{[NV]|[RG]}TW{[NV]|[RG]}PSQSTNV{I|L};{[QS]|[NT]}V{[DA]|[EG]}{[NV]|[RG]}PSQSTNV{I|L};{[QS]|[NT]}VW{[NV]|[RG]}PS[AG]STNV{I|L};{[QS]|[NT]}VW{[NV]|[RG]}PSQSTGGV{I|L};{[QS]|[NT]}P[{I|L}P][C(Carbamidomethyl (C))K]SQSTNV{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KP]{[HG]|PP}PSQSTNV{I|L};{[MG]|[TS]}N[TP]{[NV]|[RG]}PSQSTNV{I|L} 3.8114;3.5522;3.4421;3.3291;3.2304;3.2304;3.2304;3.0772;3.0114;2.9007 -;-;-;-;-;-;-;-;-;- 768 1 1.179 50370.4 1.0 7899 5474 13359 HBL1_DMSO_200M_050219_1,13375 HBL1_DMSO_200M_050219_1,13375,RERERDRDRDR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13376 67.403 389.0 100330.0 25 0 18355.0 -1 0 33 1125.1275779348712 0 1125.127490222454 PEAK CID FTMS 0 0 0 13359 308124.46875 1.0 0 0.0 17 3 C 1 -1 5.4846 0.0 0.0 0.24395 0.0 0.0 1124.697218974284 1017.4970698576094 2142.1942888318936 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.24395 - 1 + 1 1.179 39508.1 1.0 7900 5474 13359 HBL1_DMSO_200M_050219_1,13376 HBL1_DMSO_200M_050219_1,13376, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13377 67.409 333.0 206230.0 25 0 16195.0 + 23664 FPYSATPSGTSI 12 123 614.2981720908816 1226.5817912485631 2 614.2991821169853 MULTI CID FTMS 0 0 0 13359 319565.84375 1.0 0 0.0 18 Unmodified _LTRSCFCSTPI_ ENSG00000020633|ENST00000308873|RUNX3;nc|ENSG00000020633|Q13761-2|RUNX3 15.248480904072842 0.7179608125786238 3 {M(Oxidation (M))|F}[WD]S{I|L} 5 9 28.729 0.0 0.0 2.3422 0.0 0.0 560.2790387487647 0.0 560.2790387487647 0.0 16.945985302999187 0.0 0.0 0 0.5 0.0 1.3807196863200843 0.0 {M(Oxidation (M))|F}[WD]S{I|L} 2.3422 - 728 + 1 1.179 56575.5 1.0 7901 5474 13359 HBL1_DMSO_200M_050219_1,13377 HBL1_DMSO_200M_050219_1,13377,LTRSCFCSTPI False False FPYSATPSGTSI 67.408724 614.299182116985 6569770.0 13359.0 ENSG00000020633|ENST00000308873|RUNX3;;nc|ENSG00000020633|Q13761-2|RUNX3 4.271056493123372 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13378 67.414 262.0 397200.0 25 0 31168.0 + 19295 LEKSLELAP 9 146 333.8625431581873 0 333.8627197146416 PEAK CID FTMS 0 0 0 13359 284746.75 1.0 0 0.0 19 Unmodified _LEKSLELAP_ ENSG00000185453|ENST00000614654|ZSWIM9 30.63653989081413 0.1077493867305487 3 S 1 8 6.0257 0.0 0.0 0.90515 0.0 0.0 507.6046506700872 68.05137811832265 575.6560287884099 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1421590589602531 0.0 + S 0.90515 + + 31 + 1 1.179 85100.2 1.0 7902 5474 13359 HBL1_DMSO_200M_050219_1,13378 HBL1_DMSO_200M_050219_1,13378,LEKSLELAP True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13379 67.421 357.0 143280.0 25 0 24414.0 + -1 MKRKYQRCQLE 11 55 749.8842686368871 0 749.8834106326103 PEAK CID FTMS 0 0 0 13359 259739.1875 1.0 0 0.0 20 Oxidation (M) _M(Oxidation (M))KRKYQRCQLE_ REV__ENSG00000149930|ENST00000308893|TAOK2;REV__nc|ENSG00000149930|Q9UL54-2|TAOK2;REV__nc|ENSG00000149930|Q9UL54-3|TAOK2;REV__nc|ENSG00000149930|Q9UL54-4|TAOK2 5.296884461304476 0.47618401536486 3 R 1 -1 5.4846 0.0 0.0 0.36618 0.0 0.0 352.1462705727991 986.5014742486936 1338.6477448214928 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.36618 + + 5 + 1 1.179 41918.9 1.0 7903 5474 13359 HBL1_DMSO_200M_050219_1,13379 HBL1_DMSO_200M_050219_1,13379,MKRKYQRCQLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13381 67.43 368.0 112090.0 25 0 10464.0 + 36423 SYYDNVRPLAY 11 76 680.8303251699896 1359.646097406779 2 680.8328735232353 MULTI CID FTMS 0 0 0 13380 117692.40625 0.3068772846778468 4 -0.3363418579101562 1 Unmodified _SYYDNVRPLAY_ ENSG00000108830|ENST00000587250|RND2 33.4449034751529 0.3133739643825231 3 VNDY[MT] 6 10 36.956 0.0 0.0 2.718 0.0 0.0 618.3502190256931 0.0 618.3502190256931 0.0 22.351453248366795 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.3807196863200844 VNDY[MT] 2.718 - 43 1 1.179 34028.4 1.0 7904 5475 13380 HBL1_DMSO_200M_050219_1,13381 HBL1_DMSO_200M_050219_1,13381,SYYDNVRPLAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13382 67.431 11.0 3658500.0 25 0 271640.0 + 3102 AVPDGPLQEV 10 68 512.7690386614263 1023.5235243896526 2 512.7691528201103 MULTI CID FTMS 0 0 0 13380 4138131.25 0.6377832433393413 1 -0.0811843872070312 2 Unmodified _AVPDGPLQEV_ ENSG00000120800|ENST00000261637|UTP20 34.40172386719151 0.2166836008404837 3 {[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]Q{I|L}P 7 7 44.353 0.0 0.0 4.3334 0.0 0.0 0.0 266.07822595767817 266.07822595767817 22.926288272058883 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3494850021680094 {[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]Q{I|L}P 4.3334 - 208 + 1 1.179 34830.7 1.0 7905 5475 13380 HBL1_DMSO_200M_050219_1,13382 HBL1_DMSO_200M_050219_1,13382,AVPDGPLQEV False True AVPDGPLQEV 67.430961 512.76915282011 64621264.0 13380.0 ENSG00000120800|ENST00000261637|UTP20 4.605587959289551 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13383 67.432 22.0 3056400.0 25 0 452110.0 + 3627 DADYAIKI 8 76 454.739735521762 907.464918110324 2 454.7399780154228 MULTI CID FTMS 0 0 0 13380 2515290.5 0.1352055499795307 -2 0.0961380004882812 3 Unmodified _DADYAIKI_ ENSG00000143368|ENST00000271628|SF3B4;ENST00000553618.1_1_14:67665960-67666731:+|nuORF 52.268347100219714 0.1285778651304833 3 {[DA]|[EG]}DYA{I|L}K{I|L} 8 0 + 79.602 0.0 0.0 8.7719 8.7719 88.205 0.0 0.0 0.0 22.764209843288903 3.590219426416681 3.590219426416681 3.590219426416681 0 1.6861818737241734 2.0 0.0 0.3054621874040891 + + {[DA]|[EG]}DYA{I|L}K{I|L};{[DA]|[EG]}DYA{I|L}{I|L}K;{[DA]|[EG]}[KA][RH][NP] 8.7719;8.3762;1.6709 +;-;- + 158 + 1 1.179 55861.3 1.0 7906 5475 13380 HBL1_DMSO_200M_050219_1,13383 HBL1_DMSO_200M_050219_1,13383,DADYAIKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13384 67.433 20.0 1708500.0 25 0 187670.0 + 41351 VPKALEPYV 9 71 508.2952236047429 1014.5758942762858 2 508.2963134646416 MULTI CID FTMS 0 0 0 13380 1531380.25 0.2103028364195267 -4 0.2626876831054687 4 Unmodified _VPKALEPYV_ ENSG00000183434|ENST00000310125|TFDP3;ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1 15.847184025352805 0.4077185912009129 3 [VP][WR]VPYV 8 4 [VP][WR]V + + 27.167 10.659 1.6724 2.6777 2.6777 49.624 0.0 0.0 0.0 0.0 14.948500216800936 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 [VP][WR]VPYV 2.6777 - 59 + 1 1.179 32803.8 1.0 7907 5475 13380 HBL1_DMSO_200M_050219_1,13384 HBL1_DMSO_200M_050219_1,13384,VPKALEPYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13385 67.435 51.0 1473600.0 25 0 207410.0 + 43840 YFHEALRAF 9 92 385.1978525556127 1152.571728267038 3 385.1975585818291 MULTI CID FTMS 0 0 0 13380 1087071.875 1.0 0 0.0 5 Unmodified _YFHEALRAF_ ENSG00000132604|ENST00000254942|TERF2;nc|ENSG00000132604|Q15554-4|TERF2;TERF2|p.W465Yfs*7|1|0.07|ENSG00000132604|chr16:69361436-69361437|-/AAGT|frameshift_variant 20.580933911654288 0.2795815587326093 3 Y{M(Oxidation (M))|F}HEA{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F} 9 0 + 54.9 0.0 0.0 4.7633 4.7633 87.818 0.0 0.0 0.0 26.47176992505884 3.7540195163042256 3.7540195163042256 54.9004073159891 0 0.4247425010840047 0.0 0.4247425010840047 0.3252574989159953 + + Y{M(Oxidation (M))|F}HEA{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F} 4.7633 + + 53 + 1 1.179 65104.2 1.0 7908 5475 13380 HBL1_DMSO_200M_050219_1,13385 HBL1_DMSO_200M_050219_1,13385,YFHEALRAF False True YFHEALRAF 67.434657 385.197558581829 6880137.0 13380.0 TERF2|p.W465Yfs*7|1|0.07|ENSG00000132604|chr16:69361436-69361437|-/AAGT|frameshift_variant;;nc|ENSG00000132604|Q15554-4|TERF2;;ENSG00000132604|ENST00000254942|TERF2 3.341218133767446 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13386 67.436 48.0 1590000.0 25 0 298770.0 + 5861 DPWRIRQI 8 93 542.3064802274614 1082.5984075217227 2 542.3073608279228 MULTI CID FTMS 0 0 0 13380 1045855.5 0.7093373493975904 1 -0.0811843872070312 6 Unmodified _DPWRIRQI_ ENSG00000164941|ENST00000523731|INTS8;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8 9.347437153973935 0.7675937258251505 3 D{I|L} 2 6 20.969 0.0 0.0 1.9369 0.0 0.0 0.0 851.4662637163445 851.4662637163445 1.1618696905209802 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L} 1.9369 - 168 + 1 1.179 62894.8 1.0 7909 5475 13380 HBL1_DMSO_200M_050219_1,13386 HBL1_DMSO_200M_050219_1,13386,DPWRIRQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13387 67.438 100.0 933280.0 25 0 59218.0 + -1 QMISRIEYV 9 118 570.2981556836663 1138.5817584341326 2 569.8004638552666 MULTI CID FTMS 0 0 0 13380 837688.75 0.83845231804539 1 -0.0811843872070312 7 Carbamidomethyl (C) _VC(Carbamidomethyl (C))QSRLYIT_ nc|ENSG00000113712|P48729-3|CSNK1A1;ENSG00000113712|ENST00000377843|CSNK1A1;ENSG00000180138|ENST00000379800|CSNK1A1L;nc|ENSG00000113712|P48729-2|CSNK1A1 8.593279151180031 0.6146971463335029 3 EM{I|L}SR{[QN]|[E{I|L}]|[KN]}YV 9 -1 + 43.188 0.0 0.0 3.7931 3.7931 80.7 0.0 0.0 0.0 26.84685769304918 12.50894362433556 12.50894362433556 9.208187539523747 0 0.0 0.0 0.2887254899964357 0.0 EM{I|L}SR{[QN]|[E{I|L}]|[KN]}YV;EM{I|L}S[VG]{[QN]|[E{I|L}]|[KN]}YV;EMVTR{[QN]|[E{I|L}]|[KN]}YV;EMVT[VG]{[QN]|[E{I|L}]|[KN]}YV;EM{I|L}SR[PA]{[HG]|PP}AA;[W{I|L}]Q[EP][RD]PV;EMVTR[PA]{[HG]|PP}AA 3.7931;2.9844;2.8561;2.0474;1.1551;0.45635;0.21808 -;-;-;-;-;-;- 362 + 1 1.179 75801.1 1.0 7910 5475 13380 HBL1_DMSO_200M_050219_1,13387 HBL1_DMSO_200M_050219_1,13387,VCQSRLYIT False False QMISRIEYV 67.438118 569.800463855267 7326157.5 13380.0 nc|ENSG00000113712|P48729-3|CSNK1A1;;ENSG00000113712|ENST00000377843|CSNK1A1;;ENSG00000180138|ENST00000379800|CSNK1A1L;;nc|ENSG00000113712|P48729-2|CSNK1A1 6.282184600830078 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13388 67.443 238.0 842700.0 25 0 75573.0 + 39776 VEPQHQADRP 10 194 588.7908184564778 1175.5670839797556 2 588.7911865115166 MULTI CID FTMS 0 0 0 13380 737852.1875 0.3241736035994872 -4 0.2626876831054687 8 Unmodified _VEPQHQADRP_ REV__ENST00000526047.1_1_11:74618188-74632322:-|nuORF 51.629811660486645 0.0705852162080619 3 DP{I|L}QQ{I|L}{[CA]|SS}{M(Oxidation (M))|F}AA 11 -1 + 94.703 0.0 0.0 8.056 8.056 90.292 0.0 0.0 0.0 48.42116723107048 3.4768294003359586 3.4768294003359586 6.473829701146201 0 2.305462187404089 1.6989700043360187 1.024227503252014 0.9247425010840048 DP{I|L}QQ{I|L}{[CA]|SS}{M(Oxidation (M))|F}AA;DP{I|L}QQ{I|L}{[CA]|SS}AA{M(Oxidation (M))|F};DP{I|L}[AG]Q{I|L}{[CA]|SS}{M(Oxidation (M))|F}AA;DP{I|L}Q[AG]{I|L}{[CA]|SS}{M(Oxidation (M))|F}AA;DP{I|L}QQ{[WT]|[RM]}{M(Oxidation (M))|F}AA;D{I|L}PQQ{I|L}{[CA]|SS}{M(Oxidation (M))|F}AA;DP{I|L}[AG]Q{I|L}{[CA]|SS}AA{M(Oxidation (M))|F};DP{I|L}QQ{I|L}[MN]A{M(Oxidation (M))|F};DP{I|L}Q[AG]{I|L}{[CA]|SS}AA{M(Oxidation (M))|F};DP{I|L}QQ{[WT]|[RM]}AA{M(Oxidation (M))|F} 8.056;7.5053;7.2795;6.9182;6.8755;6.8085;6.7288;6.5868;6.3675;6.3248 -;-;-;-;-;-;-;-;-;- 6467 + 1 1.179 146947.8 1.0 7911 5475 13380 HBL1_DMSO_200M_050219_1,13388 HBL1_DMSO_200M_050219_1,13388,VEPQHQADRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13389 67.444 20.0 1669700.0 25 0 200740.0 8825 EYLHSRRI 8 51 537.2942810826698 1072.5740092321396 2 537.2925903201103 MULTI CID FTMS 0 0 0 13380 698027.3125 0.4845932452739905 -2 0.0961380004882812 9 Unmodified _EYLHSRRI_ ENSG00000006062|ENST00000344686|MAP3K14 9.347437153973935 0.7675937258251505 3 [YE]{I|L} 3 5 25.686 0.0 0.0 2.3948 0.0 0.0 0.0 664.3618564823927 664.3618564823927 9.488474775526186 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + [YE]{I|L} 2.3948 + + 35 1 1.179 31838.1 1.0 7912 5475 13380 HBL1_DMSO_200M_050219_1,13389 HBL1_DMSO_200M_050219_1,13389,EYLHSRRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13390 67.449 264.0 681910.0 25 0 66006.0 + 16443 KAIEELLKEA 10 202 572.3345481814807 1142.6545434297614 2 572.3354980349541 MULTI CID FTMS 0 0 0 13380 570947.5625 0.5640844527294754 1 -0.0811843872070312 10 Unmodified _KAIEELLKEA_ nc|ENSG00000186184|P0DPB5|POLR1D 80.23954778395604 0.0168714972052198 3 [KA]{I|L}ENK{I|L}EKA 10 4 + 87.655 0.0 0.0 7.6712 7.6712 86.897 0.0 0.0 0.0 1.223637474483482 72.1703136622291 1.223637474483482 3.9078548132439854 0 2.139301693515057 0.1426675035687315 1.7689301784845295 0.5242275032520141 [KA]{I|L}ENK{I|L}EKA;[KA]{I|L}ENK{I|L}KEA;[KA]{I|L}EE{I|L}{I|L}EKA;[K{I|L}]AENK{I|L}EKA;[KA]{I|L}[DG]AK{I|L}EKA;{[QN]|[E{I|L}]|[KN]}E{I|L}AK{I|L}EKA;[KA]{I|L}EE{I|L}{I|L}KEA;[KA]{I|L}EGGK{I|L}EKA;[{I|L}A]KENK{I|L}EKA;[K{I|L}]AENK{I|L}KEA 7.6712;7.3292;7.2358;7.0178;6.9228;6.9178;6.8938;6.8691;6.7113;6.6758 -;-;-;-;-;-;+;-;-;- + 12047 1 1.179 136264.8 1.0 7913 5475 13380 HBL1_DMSO_200M_050219_1,13390 HBL1_DMSO_200M_050219_1,13390,KAIEELLKEA True True KAIEELLKEA 67.448657 572.335498034954 4795070.0 13380.0 nc|ENSG00000186184|P0DPB5|POLR1D 6.049832185109456 2.0 True 10.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13391 67.452 152.0 1410600.0 25 0 171880.0 + 21383 LPFTMKKI 8 156 326.5332982751414 976.5780654256243 3 326.5331603884697 MULTI CID FTMS 0 0 0 13380 545480.0625 1.0 0 0.0 11 Unmodified _LPFTMKKI_ ENSG00000122376|ENST00000298786|SHLD2;ENST00000497389.6_1_10:46918355-46938364:+|nuORF;nc|ENSG00000122376|Q86V20|SHLD2 41.8396318013385 0.2035142800366642 3 {I|L}P{M(Oxidation (M))|F}TMKK{I|L} 8 0 + 72.251 0.0 0.0 7.3984 7.3984 90.569 0.0 0.0 0.0 26.85509316730732 8.457478138247367 8.457478138247367 8.457478138247367 0 0.6866654986684733 1.2218487496163564 1.110924374808178 0.2396518287104437 + + {I|L}P{M(Oxidation (M))|F}TMKK{I|L};{I|L}P{M(Oxidation (M))|F}TMK{I|L}K;{I|L}{I|L}MTMKK{I|L};{I|L}P{I|L}{[YC]|[HE]}KK{I|L};{I|L}{I|L}MTMK{I|L}K;{I|L}P{I|L}{[YC]|[HE]}K{I|L}K;{I|L}{I|L}P{[YC]|[HE]}KK{I|L};{I|L}{I|L}P{[YC]|[HE]}K{I|L}K;[MT]KK{M(Oxidation (M))|F}P{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TKKM{I|L}{I|L} 7.3984;6.5324;6.3288;5.6514;5.4628;4.7854;4.5818;3.7158;3.3273;3.2202 +;-;-;-;-;-;-;-;-;- + 792 + 1 1.179 172357.4 1.0 7914 5475 13380 HBL1_DMSO_200M_050219_1,13391 HBL1_DMSO_200M_050219_1,13391,LPFTMKKI False True LPFTMKKI 67.451672 326.53316038847 4706652.5 13380.0 nc|ENSG00000122376|Q86V20|SHLD2;;ENST00000497389.6_1_10:46918355-46938364:+|nuORF;;ENSG00000122376|ENST00000298786|SHLD2 4.237099965413411 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13392 67.457 295.0 504770.0 25 0 53268.0 -1 NACEMELVKVL 11 148 632.8188774762995 1263.6232020193988 2 632.8187744021416 MULTI CID FTMS 0 0 0 13380 443137.375 0.934523620446384 1 -0.0811843872070312 12 Oxidation (M) _NACEM(Oxidation (M))ELVKVL_ nc|ENSG00000151914|Q03001-3|DST 24.881564428377168 0.5079759154518888 3 {NN|[MP]|[D{I|L}]|[EV]}VS{[ES]|[DT]|[{I|L}C]}H{[YC]|[HE]}V{I|L} 11 -1 + 50.327 0.0 0.0 3.9827 3.9827 71.971 0.0 0.0 0.0 10.85280727246829 12.934497027561283 10.85280727246829 1.7609125905567922 0 0.3494850021680094 1.6989700043360187 0.5669015600442578 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}VS{[ES]|[DT]|[{I|L}C]}H{[YC]|[HE]}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}VS{[ES]|[DT]|[{I|L}C]}[C(Carbamidomethyl (C))D]KV{I|L};{NN|[MP]|[D{I|L}]|[EV]}VS{[ES]|[DT]|[{I|L}C]}[C(Carbamidomethyl (C))S]RV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PA]S{M(Oxidation (M))|F}H{[YC]|[HE]}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PA]S{M(Oxidation (M))|F}[C(Carbamidomethyl (C))D]KV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PA]S{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S]RV{I|L};{NN|[MP]|[D{I|L}]|[EV]}SV{[ES]|[DT]|[{I|L}C]}H{[YC]|[HE]}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}S[PA]{M(Oxidation (M))|F}H{[YC]|[HE]}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}SV{[ES]|[DT]|[{I|L}C]}[C(Carbamidomethyl (C))D]KV{I|L};{NN|[MP]|[D{I|L}]|[EV]}S[PA]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))D]KV{I|L} 3.9827;3.8434;3.6678;3.6501;3.5108;3.3352;3.2681;3.1737;3.1287;3.0343 -;-;-;-;-;-;-;-;-;- 2649 1 1.179 115513.2 1.0 7915 5475 13380 HBL1_DMSO_200M_050219_1,13392 HBL1_DMSO_200M_050219_1,13392,NACEMELVKVL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13393 67.463 303.0 635290.0 25 0 67122.0 + 45248 YSCKFHETS 9 185 551.2353414326877 1100.4561299321754 2 551.2360717654228 MULTI CID FTMS 0 0 0 13380 367129.84375 0.5607481029418363 -2 0.0961380004882812 13 Unmodified _YSCKFHETS_ REV__ENST00000228567.7_1_12:33579267-33592494:-|nuORF 30.63653989081413 0.1413794767160703 3 {[{M(Oxidation (M))|F}C]|[YS]}WTS{M(Oxidation (M))|F}SSH 9 -1 + 72.997 0.0 0.0 6.6333 6.6333 86.293 0.0 0.0 0.0 5.998517618415903 5.998517618415903 5.998517618415903 5.998517618415903 0 0.3807196863200844 0.0 1.7585820071949734 0.0 {[{M(Oxidation (M))|F}C]|[YS]}WTS{M(Oxidation (M))|F}SSH;{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}STW[MT];{[{M(Oxidation (M))|F}C]|[YS]}{[DA]|[EG]}TS{M(Oxidation (M))|F}SSH;[AG]NS{M(Oxidation (M))|F}STW[MT];{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}ST{[DA]|[EG]}[MT];[AG]NS{M(Oxidation (M))|F}ST{[DA]|[EG]}[MT];[AG]GGS{M(Oxidation (M))|F}STW[MT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{[QG]|[NA]}STW[MT];{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}T]STW[MT];{[{M(Oxidation (M))|F}C]|[YS]}WN{[HG]|PP}NSH 6.6333;6.0882;5.7966;5.4072;5.2515;4.5744;4.2284;4.0417;4.0417;3.9165 -;-;-;-;-;-;-;-;-;- 4130 + 1 1.179 149407.0 1.0 7916 5475 13380 HBL1_DMSO_200M_050219_1,13393 HBL1_DMSO_200M_050219_1,13393,YSCKFHETS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13394 67.469 323.0 564240.0 25 0 77405.0 + 43592 YAENAMRYI 9 175 565.7679848546338 1129.5214167760676 2 565.7687866091728 MULTI CID FTMS 0 0 0 13380 316162.84375 0.223357398117417 -2 0.0961380004882812 14 Unmodified _YAENAMRYI_ nc|ENSG00000114503|P52298-3|NCBP2 85.64151623876279 0.0161498729896241 3 YAENAMRY{I|L} 9 0 + 117.18 0.0 0.0 10.374 10.374 95.112 0.0 0.0 0.0 104.07776051782854 10.747534640495177 10.747534640495177 9.208187539523747 0 1.6549471895720984 2.0 0.3807196863200844 1.4916440611282624 + + YAENAMRY{I|L};YAEGGAMRY{I|L};YAE[C(Carbamidomethyl (C))R]RY{I|L};YA[WQ]MRY{I|L};YA{I|L}{[C(Carbamidomethyl (C))G]|[NC]}DRY{I|L};YA{I|L}[YQ]QEC{I|L};YA{I|L}[YQ]Q[MD]V;YA[DV]{[QC]|[C(Carbamidomethyl (C))A]}RY{I|L};YAEN[HN][RN]{I|L};YA{I|L}[YQ][AG]EC{I|L} 10.374;9.5588;8.0975;7.2902;6.8766;6.5509;6.1257;6.0754;5.8705;5.7357 +;-;-;-;-;-;-;-;-;- + 1813 + 1 1.179 136798.1 1.0 7917 5475 13380 HBL1_DMSO_200M_050219_1,13394 HBL1_DMSO_200M_050219_1,13394,YAENAMRYI True True YAENAMRYI 67.468518 565.768786609173 14894006.0 13380.0 nc|ENSG00000114503|P52298-3|NCBP2 5.617514451344808 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13395 67.477 455.0 620350.0 25 0 67615.0 + + -1 DPFGPRRGGMIV 12 178 434.5640117406159 0 434.5631896853447 PEAK CID FTMS 0 0 0 13380 315798.5 1.0 0 0.0 15 Carbamidomethyl (C) _DPILC(Carbamidomethyl (C))RSRWV_ ENST00000484891.1_1_20:1115545-1145721:+|nuORF;ENSG00000125818|ENST00000335877|PSMF1 10.315234532428624 0.3724224702302103 3 EEV 3 -1 9.0411 0.0 0.0 1.0427 0.0 0.0 225.79677240525672 281.13778305644536 506.9345554617021 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EEV 1.0427 - 35 + 1 1.179 228989.3 1.0 7918 5475 13380 HBL1_DMSO_200M_050219_1,13395 HBL1_DMSO_200M_050219_1,13395,DPILCRSRWV False False DPFGPRRGGMIV 67.47658 434.563189685345 2837007.25 13380.0 ENST00000484891.1_1_20:1115545-1145721:+|nuORF;;ENSG00000125818|ENST00000335877|PSMF1 1.4038387537002563 3.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13396 67.484 415.0 267070.0 25 0 10960.0 -1 0 136 859.9168675744529 1717.8191822157055 2 859.9173461794853 MULTI CID FTMS 0 0 0 13380 179872.5625 0.9212272045793104 1 -0.0811843872070312 16 3 [MN]PN{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[VS]Q 15 -1 + 80.601 0.0 0.0 4.692 4.692 74.513 0.0 0.0 0.0 24.60730838531493 1.8582077556327328 1.8582077556327328 1.8582077556327328 0 0.3252574989159953 1.6989700043360187 0.6549471895720984 1.873712505420024 [MN]PN{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[VS]Q;[MN]PN{I|L}N[YE]SQ{I|L}VP{[CP]|[EA]};[MN]PN{I|L}NWQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[VS]Q;[MN]PN{I|L}NADQPN[H{I|L}]{I|L}Q;[MN]PN{I|L}N[YE]S{I|L}QVP{[CP]|[EA]};[MN]PN{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VS]{I|L}Q;[MN]PN{I|L}N[YE]S{I|L}D{I|L}APQ;[MN]PN{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]VSQ{I|L}VP{[CP]|[EA]};[MN]PN{I|L}N[YE]VTQVP{[CP]|[EA]};[MN]PN{I|L}N[YE]SQV{I|L}P{[CP]|[EA]} 4.692;4.5839;4.3026;4.2796;4.2531;4.1975;4.1647;4.1309;4.1109;4.0737 -;-;-;-;-;-;-;-;-;- 17503 + 1 1.179 79124.6 1.0 7919 5475 13380 HBL1_DMSO_200M_050219_1,13396 HBL1_DMSO_200M_050219_1,13396, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13397 67.492 360.0 185380.0 25 0 14749.0 -1 TLMTICPGTV 10 116 554.7701001175585 1107.525647301917 2 554.8193237185478 MULTI CID FTMS 0 0 0 -1 0 17 Carbamidomethyl (C),Oxidation (M) _TLM(Oxidation (M))TIC(Carbamidomethyl (C))PGTV_ ENSG00000080709|ENST00000673685|KCNN2;ENSG00000105642|ENST00000684775|KCNN1;ENSG00000143603|ENST00000271915|KCNN3;nc|ENSG00000080709|Q9H2S1|KCNN2;nc|ENSG00000105642|Q92952-2|KCNN1;nc|ENSG00000143603|Q9UGI6-2|KCNN3;nc|ENSG00000143603|Q9UGI6-3|KCNN3 10.823927491677226 0.6659270209832991 3 [VP]{I|L}K{[ET]|[MV]}P 7 -1 16.163 0.0 0.0 1.4594 0.0 0.0 0.0 340.0453949761384 340.0453949761384 2.7469071827413654 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.0 [VP]{I|L}K{[ET]|[MV]}P 1.4594 - 183 1 1.179 56262.7 1.0 7920 5475 13380 HBL1_DMSO_200M_050219_1,13397 HBL1_DMSO_200M_050219_1,13397,TLMTICPGTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13398 67.502 608.0 240950.0 25 0 59633.0 + 14495 IGKNWELRICN 11 123 673.3534205789742 0 673.3516723513603 PEAK CID FTMS 0 0 0 13380 117272.7421875 0.788226397649054 -1 0.0646286010742187 18 Unmodified _IGKNWELRICN_ REV__ENSG00000138735|ENST00000354960|PDE5A;REV__nc|ENSG00000138735|O76074-2|PDE5A 9.38312468134398 0.4559597037863106 3 {I|L}{I|L}{I|L}S 4 -1 18.928 0.0 0.0 1.4076 0.0 0.0 264.0914404710098 651.3104952447874 915.4019357157972 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L}S 1.4076 - 65 + 1 1.179 110852.6 1.0 7921 5475 13380 HBL1_DMSO_200M_050219_1,13398 HBL1_DMSO_200M_050219_1,13398,IGKNWELRICN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13400 67.507 19.0 1556300.0 25 0 193570.0 + 21611 LPKSIYSQI 9 69 524.8053892145365 1047.5962254958729 2 524.8057739138603 MULTI CID FTMS 0 0 0 13399 1798072.125 0.1383802270591448 2 -0.2211685180664062 1 Unmodified _LPKSIYSQI_ ENSG00000164934|ENST00000612750|DCAF13 31.26834338654808 0.1333407332142048 3 [Q{I|L}]A{I|L}Y{I|L}SQ{I|L} 9 4 + 40.71 0.0 0.0 3.886 3.886 76.195 0.0 0.0 0.0 5.642492736872597 27.950397039808763 5.642492736872597 4.771212547196619 0 0.7856668758921829 0.0 0.0 0.0 [Q{I|L}]A{I|L}Y{I|L}SQ{I|L};[Q{I|L}]A{I|L}{I|L}YSQ{I|L};[KP]S{I|L}Y{I|L}SQ{I|L};[KP]S{I|L}{I|L}YSQ{I|L};[VP][KT]Y{I|L}SQ{I|L};[VP][KT]{I|L}YSQ{I|L};[Q{I|L}]A{I|L}Y{[QS]|[NT]}{I|L}{I|L};[KP]S{I|L}Y{[QS]|[NT]}{I|L}{I|L};[VP][KT]Y{[QS]|[NT]}{I|L}{I|L} 3.886;3.4306;3.3113;2.8559;2.6709;2.2154;1.3462;0.77149;0.13104 -;-;-;-;-;-;-;-;- 78 1 1.179 27191.5 1.0 7922 5476 13399 HBL1_DMSO_200M_050219_1,13400 HBL1_DMSO_200M_050219_1,13400,LPKSIYSQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13401 67.508 13.0 3082500.0 25 0 469770.0 + 33945 SLHEKRSV 8 69 478.26999700867896 954.525441084158 2 478.2698547244072 MULTI CID FTMS 0 0 0 13399 3576002.75 0.4419266119387445 2 -0.2211685180664062 2 Unmodified _SLHEKRSV_ REV__ENST00000368090.3_1_1:160000264-160000540:-|nuORF 2.577480529830294 0.808687252328423 3 V 1 -1 9.464 0.0 0.0 0.99148 0.0 0.0 837.4458340058361 0.0 837.4458340058361 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.99148 + + 6 + 1 1.179 36416.7 1.0 7923 5476 13399 HBL1_DMSO_200M_050219_1,13401 HBL1_DMSO_200M_050219_1,13401,SLHEKRSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13402 67.509 6.1 5646300.0 25 0 302220.0 -1 RCHRRRRRCCC 11 60 866.9067123982009 1731.7988718632016 2 866.9080688357353 MULTI CID FTMS 0 0 0 13399 7517515.5 0.3927543540916534 -1 0.0811843872070312 3 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 3 [MN]PN{I|L}NADQ 9 -1 64.843 0.0 0.0 3.7443 0.0 0.0 0.0 731.3517550104124 731.3517550104124 45.01016889216956 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 [MN]PN{I|L}NADQ 3.7443 - 155 + 1 1.179 29724.7 1.0 7924 5476 13399 HBL1_DMSO_200M_050219_1,13402 HBL1_DMSO_200M_050219_1,13402,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13403 67.51 16.0 2978400.0 25 0 360080.0 + 45095 YPYPYPHTL 9 66 575.7823890577012 1149.5502251822022 2 575.7821533083916 MULTI CID FTMS 0 0 0 13399 2776277.25 0.4443423549617569 2 -0.2211685180664062 4 Unmodified _YPYPYPHTL_ ENSG00000116221|ENST00000360840|MRPL37 57.47134341890925 0.0274820932774257 3 YPY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PH[{I|L}T] 9 0 + 76.661 0.0 0.0 6.6687 6.6687 94.462 0.0 0.0 0.0 54.03598431600422 12.632192780232783 12.632192780232783 76.66054693457546 0 0.805462187404089 2.0 1.274227503252014 0.0 + + YPY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PH[{I|L}T] 6.6687 + + 129 + 1 1.179 40137.1 1.0 7925 5476 13399 HBL1_DMSO_200M_050219_1,13403 HBL1_DMSO_200M_050219_1,13403,YPYPYPHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13404 67.511 22.0 2854100.0 25 0 470790.0 + 24437 MGYKTIMV 8 85 471.74279793318175 941.4710429331636 2 471.7431823611259 MULTI CID FTMS 0 0 0 13399 1806018.375 0.1674719526743542 2 -0.2211685180664062 5 Unmodified _MGYKTIMV_ ENSG00000084774|ENST00000264705|CAD 38.15118350030904 0.2652218139009398 3 [{M(Oxidation (M))|F}T]{I|L}TKCMV 8 5 + 34.039 0.0 0.0 3.6155 3.6155 71.462 0.0 0.0 0.0 18.554177080693734 0.6945172954003311 0.6945172954003311 1.9193800377178007 0 0.0 0.0 0.6694451763165201 0.0 [{M(Oxidation (M))|F}T]{I|L}TKCMV;[YK]GT{I|L}MMV;{[MG]|[TS]}YKT{I|L}MV;[YK]GTM{I|L}MV;[{M(Oxidation (M))|F}T]M{I|L}T[KC]V;[{M(Oxidation (M))|F}T]{I|L}MT[KC]V;[{M(Oxidation (M))|F}T]CKT{I|L}MV;[YK]GMT{I|L}MV;[{M(Oxidation (M))|F}T]{I|L}TK[W{M(Oxidation (M))|F}];[{M(Oxidation (M))|F}T]{I|L}TM[KC]V 3.6155;3.4116;3.3723;3.3139;3.0208;2.9231;2.8412;2.7328;2.4333;2.342 -;-;+;-;-;-;-;-;-;- + 261 + 1 1.179 55496.7 1.0 7926 5476 13399 HBL1_DMSO_200M_050219_1,13404 HBL1_DMSO_200M_050219_1,13404,MGYKTIMV False True MGYKTIMV 67.511307 471.743182361126 50442136.0 13399.0 ENSG00000084774|ENST00000264705|CAD 3.456190546353658 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13405 67.512 20.0 2647500.0 25 0 403350.0 + 42546 VTNSTRKPV 9 86 501.2911762178067 1000.5677995024134 2 501.2909423708916 MULTI CID FTMS 0 0 0 13399 1752464.125 0.4801458371805149 2 -0.2211685180664062 6 Unmodified _VTNSTRKPV_ REV__ENSG00000172469|ENST00000358812|MANEA 8.593279151180031 0.6146971463335029 3 {[QN]|[E{I|L}]|[KN]}SE{I|L} 5 -1 29.922 0.0 0.0 2.9905 0.0 0.0 0.0 426.2459505670532 426.2459505670532 9.631068929195408 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[QN]|[E{I|L}]|[KN]}SE{I|L} 2.9905 - 54 + 1 1.179 46254.2 1.0 7927 5476 13399 HBL1_DMSO_200M_050219_1,13405 HBL1_DMSO_200M_050219_1,13405,VTNSTRKPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13406 67.514 40.0 1588600.0 25 0 254100.0 + 37582 TLITDGMRSV 10 71 546.7908295708796 1091.5671062085592 2 546.7899658083916 MULTI CID FTMS 0 0 0 13399 985538.625 0.3865748749123327 -1 0.0811843872070312 7 Unmodified _TLITDGMRSV_ ENSG00000071894|ENST00000616140|CPSF1;ENST00000397477.2_1_22:32665833-32665884:+|nuORF 20.580933911654288 0.5022139299129796 3 [{I|L}T]{I|L}TD 5 5 50.713 0.0 0.0 4.6459 0.0 0.0 0.0 545.2517131244621 545.2517131244621 33.01029995663981 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + [{I|L}T]{I|L}TD 4.6459 + + 64 + 1 1.179 51914.9 1.0 7928 5476 13399 HBL1_DMSO_200M_050219_1,13406 HBL1_DMSO_200M_050219_1,13406,TLITDGMRSV False True TLITDGMRSV 67.513665 546.789965808392 21109084.0 13399.0 ENST00000397477.2_1_22:32665833-32665884:+|nuORF;;ENSG00000071894|ENST00000616140|CPSF1 3.8341643810272217 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13407 67.515 54.0 1082500.0 25 0 149690.0 + 30726 RGLDDIKDLKV 11 83 424.5820517231634 1270.7243257696905 3 424.5819885134697 MULTI CID FTMS 0 0 0 13399 561993.4375 0.1823808581914666 2 -0.2211685180664062 8 Unmodified _RGLDDIKDLKV_ ENSG00000155363|ENST00000369645|MOV10;ENST00000488160.5_1_1:113239361-113241636:+|nuORF 32.55097217414287 0.3278958561153294 3 {I|L}DK{I|L}D[QP]P 8 7 61.547 0.0 0.0 4.8435 0.0 0.0 245.1776324752687 116.05104242496328 361.228674900232 0.0 0.0 0.0 0.0 0 2.079689690656103 0.0 0.4247425010840047 0.6861818737241735 {I|L}DK{I|L}D[QP]P 4.8435 - 363 + 1 1.179 53154.0 1.0 7929 5476 13399 HBL1_DMSO_200M_050219_1,13407 HBL1_DMSO_200M_050219_1,13407,RGLDDIKDLKV False True RGLDDIKDLKV 67.51504 424.58198851347 20344872.0 13399.0 ENST00000488160.5_1_1:113239361-113241636:+|nuORF;;ENSG00000155363|ENST00000369645|MOV10 8.25623861948649 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13408 67.517 81.0 1026400.0 25 0 65576.0 + 4999 DGTILQQV 8 107 437.23752966352873 872.4605063938575 2 437.2379028201103 MULTI CID FTMS 0 0 0 13399 513908.21875 0.1416008224647117 2 -0.2211685180664062 9 Unmodified _DGTILQQV_ ENSG00000001167|ENST00000341376|NFYA;nc|ENSG00000001167|P23511-2|NFYA 46.92087301778293 0.1537303740847981 3 [DG]T{I|L}{I|L} 5 3 23.026 0.0 0.0 2.6392 0.0 0.0 0.0 370.1737076480169 370.1737076480169 3.870090806403464 0.0 0.0 0.0 0 0.0 0.9208187539523752 1.3807196863200843 0.0 + [DG]T{I|L}{I|L} 2.6392 + + 156 1 1.179 70421.6 1.0 7930 5476 13399 HBL1_DMSO_200M_050219_1,13408 HBL1_DMSO_200M_050219_1,13408,DGTILQQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13409 67.519 82.0 910750.0 25 0 131120.0 + 3671 DAENAMRYI 9 109 541.7501112633328 1081.4856695934654 2 541.7509033083916 MULTI CID FTMS 0 0 0 13399 512115.46875 0.0241691175839012 8 -0.6525726318359375 10 Unmodified _DAENAMRYI_ ENSG00000114503|ENST00000321256|NCBP2;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;ENST00000479647.1_1_3:196664263-196668636:-|nuORF;nc|ENSG00000114503|P52298-2|NCBP2 52.268347100219714 0.0353964759249114 3 {[DA]|[EG]}ENAMRY{I|L} 9 0 + 78.188 0.0 0.0 7.2297 7.2297 91.399 0.0 0.0 0.0 64.3755986110203 11.706962271689749 11.706962271689749 9.208187539523747 0 0.8494850021680094 2.0 0.0 0.6382104921644451 + + {[DA]|[EG]}ENAMRY{I|L};{[DA]|[EG]}EGGAMRY{I|L};{[DA]|[EG]}ENAY{[WT]|[RM]}{I|L};{[DA]|[EG]}ENAY[RP]{M(Oxidation (M))|F};{[DA]|[EG]}EGGAY{[WT]|[RM]}{I|L};{[DA]|[EG]}EGGAY[RP]{M(Oxidation (M))|F};WENA{[MS]|[{M(Oxidation (M))|F}A]}VV{M(Oxidation (M))|F};WENA[KS][SG]G{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[H{I|L}]MAN[C(Carbamidomethyl (C))H];{[DA]|[EG]}[WQ]Y{[WT]|[RM]}{I|L} 7.2297;6.3782;5.3331;5.0124;4.4816;4.161;3.3259;2.8165;2.8152;2.6189 +;-;-;-;-;-;-;-;-;- + 229 + 1 1.179 63387.0 1.0 7931 5476 13399 HBL1_DMSO_200M_050219_1,13409 HBL1_DMSO_200M_050219_1,13409,DAENAMRYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13410 67.521 100.0 605130.0 25 0 71149.0 + 5700 DPIVNRWYN 9 100 392.863093441669 1175.5674509252071 3 392.8632385134697 MULTI CID FTMS 0 0 0 13399 459212.6875 0.2651922229562803 -5 0.3438720703125 11 Unmodified _DPIVNRWYN_ REV__ENSG00000038002|ENST00000264595|AGA;REV__ENST00000506853.5_1_4:178355638-178363529:-|nuORF;REV__ENST00000510955.5_1_4:178358517-178361430:-|nuORF 11.640296217721598 0.521594087909532 3 [DP]{I|L}QQ 5 -1 40.718 0.0 0.0 3.4637 0.0 0.0 0.0 591.2631656071009 591.2631656071009 30.537361100656213 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5044321917401079 0.0 [DP]{I|L}QQ 3.4637 - 252 1 1.179 54967.7 1.0 7932 5476 13399 HBL1_DMSO_200M_050219_1,13410 HBL1_DMSO_200M_050219_1,13410,DPIVNRWYN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13411 67.53 508.0 438200.0 25 0 21979.0 + -1 DACCVHSRL 9 217 530.7352843852253 0 530.7343017458916 PEAK CID FTMS 0 0 0 13399 318114.8125 1.0 0 0.0 12 Carbamidomethyl (C) _DAC(Carbamidomethyl (C))CVHSRL_ REV__ENST00000562727.1_3_16:68299566-68300600:+|nuORF 11.640296217721598 0.2934555500198502 3 SQA{[MG]|[TS]}{M(Oxidation (M))|F} 6 -1 8.237 0.0 0.0 0.77747 0.0 0.0 104.03791526633808 331.1092928522094 435.1472081185475 0.0 0.0 0.0 0.0 0 0.0 0.0 0.535666875892183 0.0 SQA{[MG]|[TS]}{M(Oxidation (M))|F} 0.77747 - 255 + 1 1.179 170826.5 1.0 7933 5476 13399 HBL1_DMSO_200M_050219_1,13411 HBL1_DMSO_200M_050219_1,13411,DACCVHSRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13412 67.531 25.0 2026500.0 25 0 158370.0 + 19397 TKPVYIPEV 9 106 523.7544703310939 1045.4943877289877 2 523.7548095583916 MULTI CID FTMS 0 0 0 13399 307858.65625 0.2002096053035681 5 -0.4307098388671875 13 Unmodified _LESHITMCI_ ENSG00000121060|ENST00000316881|TRIM25;ENST00000570473.5_1_17:54973221-54981672:-|nuORF;ENST00000572021.5_1_17:54969063-54989474:-|nuORF 12.531546534597751 0.4974689918368763 3 {[VA]|[{I|L}G]}A[{I|L}A]Y{I|L}SE 9 7 28.567 0.0 0.0 2.7324 0.0 0.0 0.0 124.98508532103769 124.98508532103769 16.348200093054718 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 {[VA]|[{I|L}G]}A[{I|L}A]Y{I|L}SE 2.7324 - 117 1 1.179 47067.3 1.0 7934 5476 13399 HBL1_DMSO_200M_050219_1,13412 HBL1_DMSO_200M_050219_1,13412,LESHITMCI False False TKPVYIPEV 67.531032 523.754809558392 0.0 13399.0 ENSG00000121060|ENST00000316881|TRIM25;;ENST00000570473.5_1_17:54973221-54981672:-|nuORF;;ENST00000572021.5_1_17:54969063-54989474:-|nuORF 0.1768029530843099 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13413 67.537 318.0 531710.0 25 0 87713.0 + 5019 DGVPVIKV 8 127 413.7553654993275 825.4961780654551 2 413.7554199099541 MULTI CID FTMS 0 0 0 13399 224733.3125 0.0360226953420598 8 -0.6525726318359375 14 Unmodified _DGVPVIKV_ ENSG00000109270|ENST00000499666|LAMTOR3 28.486842064014134 0.4448922141344407 3 {M(Oxidation (M))|F}VP{I|L}KV 6 3 31.632 0.0 0.0 3.8319 0.0 0.0 124.08798822346132 0.0 124.08798822346132 0.0 19.15797136836483 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.5010912013506126 {M(Oxidation (M))|F}VP{I|L}KV 3.8319 - 112 + 1 1.179 134002.2 1.0 7935 5476 13399 HBL1_DMSO_200M_050219_1,13413 HBL1_DMSO_200M_050219_1,13413,DGVPVIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13414 67.547 553.0 473250.0 25 0 42291.0 + 9053 FEMWDWESL 9 193 621.7598359144569 1241.5051188957136 2 621.7602416872978 MULTI CID FTMS 0 0 0 13399 212442.796875 0.0168759635294448 -4 0.3007659912109375 15 Unmodified _FEMWDWESL_ REV__ENSG00000134070|ENST00000256458|IRAK2 36.04419817259434 0.0971720506436186 3 {M(Oxidation (M))|F}TEGNVS{I|L} 8 -1 70.121 0.0 0.0 5.6481 0.0 0.0 376.08836562324376 0.0 376.08836562324376 0.0 35.3820027945057 0.0 0.0 0 1.274227503252014 0.0 1.8822945126149968 0.3252574989159953 {M(Oxidation (M))|F}TEGNVS{I|L} 5.6481 - 6317 1 1.179 187908.5 1.0 7936 5476 13399 HBL1_DMSO_200M_050219_1,13414 HBL1_DMSO_200M_050219_1,13414,FEMWDWESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13415 67.556 565.0 470510.0 25 0 27004.0 + 26685 NYMMRNAVL 9 230 556.2720307593457 1110.5295085854914 2 556.2733642458916 MULTI CID FTMS 0 0 0 13399 226542.625 0.3300280288942354 -1 0.0811843872070312 16 Unmodified _NYMMRNAVL_ ENSG00000010292|ENST00000315579|NCAPD2 85.27202061508552 0.0162393975915471 3 [YN]MMRNAV{I|L} 9 0 + 67.292 0.0 0.0 6.0594 6.0594 85.203 0.0 0.0 0.0 13.88777248726403 35.42314383309956 13.88777248726403 6.656205609827246 0 1.9124379954164592 2.0 0.0 0.8536348176228749 + + [YN]MMRNAV{I|L};[YN]MMRANV{I|L};[YN]MRRC(Carbamidomethyl (C))V{I|L};[YN]MMRGGAV{I|L};[YN]M{[ES]|[DT]|[{I|L}C]}[KG]AV{I|L};[YN]MMRAGGV{I|L};[YN]M{[ES]|[DT]|[{I|L}C]}[KQ]V{I|L};[YN]M{[ES]|[DT]|[{I|L}C]}QQV{I|L};[YN]MRR[CG]V{I|L};[YN]MRRMQ{I|L} 6.0594;5.4601;5.3035;5.2303;4.8851;4.6309;4.5107;4.5107;4.4695;4.321 +;-;-;-;-;-;-;-;-;- + 5491 1 1.179 200631.0 1.0 7937 5476 13399 HBL1_DMSO_200M_050219_1,13415 HBL1_DMSO_200M_050219_1,13415,NYMMRNAVL True True NYMMRNAVL 67.556457 556.273364245892 3712951.25 13399.0 ENSG00000010292|ENST00000315579|NCAPD2 6.932765960693359 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13416 67.57 800.0 515880.0 25 0 31412.0 + 42889 VVPAALKVV 9 272 448.3025612293231 894.5905695254462 2 448.3024169802666 MULTI CID FTMS 0 0 0 13399 168624.203125 0.0169629358853824 11 -0.8273468017578125 17 Unmodified _VVPAALKVV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 21.74664581756881 0.2544899275067181 3 VVV 3 6 27.492 0.0 0.0 3.0731 0.0 0.0 0.0 594.3630461513687 594.3630461513687 5.251285343192205 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 VVV 3.0731 - 485 + 1 1.179 312113.3 1.0 7938 5476 13399 HBL1_DMSO_200M_050219_1,13416 HBL1_DMSO_200M_050219_1,13416,VVPAALKVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13417 67.581 620.0 181930.0 25 0 13751.0 -1 WRCFQWWRMDW 11 120 878.8890325392857 0 878.8890258669853 PEAK CID FTMS 0 0 0 13399 168729.625 0.7685244953351336 -2 0.14581298828125 18 Carbamidomethyl (C) _WRC(Carbamidomethyl (C))FQWWRMDW_ ENST00000430334.7_1_17:43555485-43568071:-|nuORF;ENST00000582986.5_1_17:62801160-62833227:-|nuORF 0.0 0.4761840153648598 3 H{M(Oxidation (M))|F}YNA{[{M(Oxidation (M))|F}D]|MM}[WD]N{I|L} 11 -1 36.181 0.0 0.0 2.0607 0.0 0.0 122.06960256659166 208.0730074518188 330.14261001841044 0.0 0.0 0.0 0.0 0 0.6989700043360187 0.0 1.0189301784845295 0.3252574989159953 H{M(Oxidation (M))|F}YNA{[{M(Oxidation (M))|F}D]|MM}[WD]N{I|L} 2.0607 - 3512 + 1 1.179 79114.1 1.0 7939 5476 13399 HBL1_DMSO_200M_050219_1,13417 HBL1_DMSO_200M_050219_1,13417,WRCFQWWRMDW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13418 67.584 51.0 1534800.0 25 0 316450.0 33355 SGHGNAIP 8 87 376.687578385724 751.3606038382479 2 376.6874877810478 MULTI CID FTMS 0 0 0 13399 153650.46875 0.0463948338536317 -3 0.1773223876953125 19 Unmodified _SGHGNAIP_ ENSG00000142303|ENST00000597188|ADAMTS10;ENST00000601163.1_1_19:8661189-8662174:-|nuORF;nc|ENSG00000142303|Q9H324|ADAMTS10 2.889219685676258 0.8067950007271085 3 {[TV]|[{I|L}S]}{I|L} 3 6 28.473 0.0 0.0 3.7895 0.0 0.0 0.0 435.1374952779542 435.1374952779542 3.763327241663319 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3807196863200844 0.0 {[TV]|[{I|L}S]}{I|L} 3.7895 - 77 1 1.179 64672.8 1.0 7940 5476 13399 HBL1_DMSO_200M_050219_1,13418 HBL1_DMSO_200M_050219_1,13418,SGHGNAIP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13419 67.598 800.0 96546.0 25 0 15847.0 -1 0 109 893.3634592820823 1784.7123656309643 2 894.3692504763603 MULTI CID FTMS 0 0 0 13399 154222.4375 1.0 0 0.0 20 3 {I|L}TNQ 4 -1 15.598 0.0 0.0 0.87398 0.0 0.0 1310.4610361405332 0.0 1310.4610361405332 0.0 8.652157022900075 0.0 0.0 0 0.0 0.0 0.6237125054200234 0.0 {I|L}TNQ 0.87398 - 1193 + 1 1.179 54025.3 0.8600000143051147 7941 5476 13399 HBL1_DMSO_200M_050219_1,13419 HBL1_DMSO_200M_050219_1,13419, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13421 67.602 2.4 16851000.0 25 0 1902600.0 + 32363 RYPTSIASL 9 68 504.27971494636216 1006.5448769595243 2 504.2799560427666 MULTI CID FTMS 0 0 0 13420 34376724.0 0.6605866153089454 3 -0.2780914306640625 1 Unmodified _RYPTSIASL_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 26.268140514670165 0.1969607489560049 3 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 5 + 46.533 0.0 0.0 4.623 4.623 85.126 0.0 0.0 0.0 11.249387366082992 29.542965585096823 11.249387366082992 13.979400086720368 0 0.8182503180159344 1.3979400086720375 0.4247425010840047 0.0 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L};[YR][TP]S{I|L}AS{I|L};[YR][TP]A{[TV]|[{I|L}S]}S{I|L} 4.623;3.2342;2.8388;0.37901 -;-;+;- + 113 1 1.179 37260.4 1.0 7942 5477 13420 HBL1_DMSO_200M_050219_1,13421 HBL1_DMSO_200M_050219_1,13421,RYPTSIASL False True RYPTSIASL 67.601985 504.279956042767 4498272128.0 13420.0 nc|ENSG00000154473|O43684-2|BUB3;;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;;ENSG00000154473|ENST00000368865|BUB3 6.411875406901042 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13422 67.603 7.3 13369000.0 25 0 1929200.0 + 21069 LPAGGILVF 9 92 443.7734746181057 885.5323963030114 2 443.7735778689384 MULTI CID FTMS 0 0 0 13420 17684106.0 0.5792011565612217 -9 0.7088165283203125 2 Unmodified _LPAGGILVF_ ENSG00000150990|ENST00000308736|DHX37 36.46614268402704 0.0948557732959553 3 {I|L}PN 3 7 48.5 0.0 0.0 5.4769 0.0 0.0 0.0 558.3418866034482 558.3418866034482 13.489765575595314 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PN 5.4769 - 365 + 1 1.179 78666.5 1.0 7943 5477 13420 HBL1_DMSO_200M_050219_1,13422 HBL1_DMSO_200M_050219_1,13422,LPAGGILVF True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13423 67.604 2.8 8019900.0 25 0 606660.0 + 8678 EVISKLYAV 9 55 511.3000831317905 1020.585613330381 2 511.3015930056572 MULTI CID FTMS 0 0 0 13420 28975202.0 0.4279346021829519 -2 0.1765899658203125 3 Unmodified _EVISKLYAV_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 21.74664581756881 0.2544899275067181 3 {[TV]|[{I|L}S]}KYA{I|L} 6 4 25.138 0.0 0.0 2.4631 0.0 0.0 0.0 342.16707019977474 342.16707019977474 9.564856298445576 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}KYA{I|L} 2.4631 - 81 1 1.179 24575.5 1.0 7944 5477 13420 HBL1_DMSO_200M_050219_1,13423 HBL1_DMSO_200M_050219_1,13423,EVISKLYAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13424 67.606 19.0 2263900.0 25 0 169320.0 40157 VGNKSDLVR 9 66 494.283846618593 986.553140303986 2 494.2834045290947 MULTI CID FTMS 0 0 0 13420 3377662.0 0.5855326882757015 3 -0.2780914306640625 4 Unmodified _VGNKSDLVR_ ENSG00000164949|ENST00000297596|GEM;ENSG00000166592|ENST00000299759|RRAD;ENST00000567791.1_1_16:66955609-66957656:-|nuORF 4.3292370932331545 0.7635526921153418 3 G{I|L}DK[R{I|L}]SV 8 7 22.821 0.0 0.0 2.3132 0.0 0.0 100.02821426194085 0.0 100.02821426194085 0.0 12.107961154778852 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L}DK[R{I|L}]SV 2.3132 - 31 + 1 1.179 40126.9 1.0 7945 5477 13420 HBL1_DMSO_200M_050219_1,13424 HBL1_DMSO_200M_050219_1,13424,VGNKSDLVR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13425 67.607 76.0 1759100.0 25 0 445350.0 + 45703 YYDGDVGNYYY 11 120 696.2747492111519 1390.5349454891036 2 696.2753173708916 MULTI CID FTMS 0 0 0 13420 2679229.75 0.4141687916954452 -2 0.1765899658203125 5 Unmodified _YYDGDVGNYYY_ ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF 72.96794272382148 0.0238034416328542 3 YYDGDYVGNYY 11 2 + 100.39 0.0 0.0 7.2195 7.2195 85.635 0.0 0.0 0.0 21.645293596321125 16.575773191777927 16.575773191777927 3.807196863200844 0 0.8494850021680094 2.0 1.7689301784845295 0.3807196863200844 YYDGDYVGNYY;YYDGDVYGNYY;YYDGDYVGGGYY;YYDGDV[NG]YYY;YYDGVDYGNYY;YYDGDVYGGGYY;{[YD]|[{M(Oxidation (M))|F}M]}YGDYVGNYY;{[YD]|[{M(Oxidation (M))|F}M]}GDYYVGNYY;YYDGVD[NG]YYY;{[YD]|[{M(Oxidation (M))|F}M]}GYDYVGNYY 7.2195;6.9457;6.2892;6.2587;6.1376;6.0154;5.6629;5.4986;5.4506;5.3982 -;-;-;+;-;-;-;-;-;- + 8118 1 1.179 100856.0 1.0 7946 5477 13420 HBL1_DMSO_200M_050219_1,13425 HBL1_DMSO_200M_050219_1,13425,YYDGDVGNYYY True True YYDGDVGNYYY 67.607287 696.275317370892 175299720.0 13420.0 ENST00000481281.5_1_1:32757770-32793222:+|nuORF;;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 5.512201150258382 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13426 67.61 152.0 1076800.0 25 0 249710.0 + 23948 RIVPRFSEL 9 120 558.8298471355228 1115.6451413378454 2 558.8296996951103 MULTI CID FTMS 0 0 0 13420 857971.6875 1.0 0 0.0 6 Unmodified _LVRHWRIH_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF 26.34127834903884 0.4900704351052977 3 {I|L}RV 3 6 34.693 0.0 0.0 3.1097 0.0 0.0 0.0 744.3709810846311 744.3709810846311 -2.3688000063343466 0.0 -2.3688000063343466 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 {I|L}RV 3.1097 - 228 + 1 1.179 126545.6 1.0 7947 5477 13420 HBL1_DMSO_200M_050219_1,13426 HBL1_DMSO_200M_050219_1,13426,LVRHWRIH False False RIVPRFSEL 67.610315 558.82969969511 7172875.0 13420.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5;;ENST00000423695.6_1_5:10250480-10261980:+|nuORF 5.292339404424031 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13427 67.616 311.0 559410.0 25 0 22679.0 -1 0 137 902.9175908603607 1803.8206287875216 2 902.9191772341728 MULTI CID FTMS 0 0 0 13420 783586.625 1.0 0 0.0 7 3 NMPN{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}Q 15 -1 + 135.61 0.0 0.0 7.518 7.518 86.988 0.0 0.0 0.0 26.02059991327961 15.892718607161155 15.892718607161155 4.292519900211573 0 2.508864383480216 1.6989700043360187 1.0994850021680094 2.221848749616356 NMPN{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NEHH[YT]PP{I|L}Q;NMPN{I|L}NEEY[HV]G{M(Oxidation (M))|F}{I|L}Q;NMPGG{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}GGEEQRDG{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NEE[AG]RDG{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NE{[{M(Oxidation (M))|F}H]|[RQ]}WD{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NEEQ[{I|L}A][C(Carbamidomethyl (C))M]{I|L}Q;NMPN{I|L}NEE{[VA]|[{I|L}G]}[QT]G{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NE{[{M(Oxidation (M))|F}H]|[RQ]}EDG{M(Oxidation (M))|F}{I|L}Q 7.518;7.2801;7.1627;7.0174;7.0174;7.0174;6.8879;6.766;6.7158;6.7044 -;-;-;-;-;-;-;-;-;- 5675 + 1 1.179 117548.4 1.0 7948 5477 13420 HBL1_DMSO_200M_050219_1,13427 HBL1_DMSO_200M_050219_1,13427, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13428 67.618 74.0 1226600.0 25 0 88971.0 + 12994 HALRMLQSI 9 135 534.8022018123282 1067.5898506914564 2 534.8026611208916 MULTI CID FTMS 0 0 0 13420 770596.6875 0.1175810856751107 6 -0.4759902954101562 8 Unmodified _HALRMLQSI_ ENSG00000185988|ENST00000454744|PLK5;nc|ENSG00000185988|Q496M5-2|PLK5 53.832793166522166 0.0319663582346103 3 HA{I|L}[{I|L}V][C(Carbamidomethyl (C))R]S{I|L} 9 4 + 50.307 0.0 0.0 4.7122 4.7122 73.776 0.0 0.0 0.0 1.4599599090396254 1.4599599090396254 1.4599599090396254 1.4599599090396254 0 1.424742501084005 1.5228787452803376 0.25 0.6549471895720985 HA{I|L}[{I|L}V][C(Carbamidomethyl (C))R]S{I|L};[HA][WK][KA]QS{I|L};HA{I|L}[YV]RNPV;[Y{I|L}][{M(Oxidation (M))|F}V][KA]QS{I|L};HA{I|L}[{I|L}V][C(Carbamidomethyl (C))R]TV;{[TV]|[{I|L}S]}QPP[KA]QS{I|L};HA{I|L}[YV][VG]NPV;HA{I|L}[YV]RGGPV;[{I|L}T]NPP[KA]QS{I|L};[AG]S{I|L}PP[KA]QS{I|L} 4.7122;4.5754;4.1255;4.0606;4.0586;3.7121;3.263;3.263;3.1407;3.0441 -;-;-;-;-;-;-;-;-;- 953 + 1 1.179 71884.7 1.0 7949 5477 13420 HBL1_DMSO_200M_050219_1,13428 HBL1_DMSO_200M_050219_1,13428,HALRMLQSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13429 67.625 390.0 650340.0 25 0 56716.0 20645 LLPTVGAP 8 212 384.23556222770833 766.4565715222167 2 384.2359191775322 MULTI CID FTMS 0 0 0 13420 632415.4375 0.032823490203019 12 -0.7947235107421875 9 Unmodified _LLPTVGAP_ ENST00000433972.1_1_3:9885183-9885729:-|nuORF 5.760428011301431 0.7893668129297577 3 {[{M(Oxidation (M))|F}H]|[RQ]}E 3 8 24.353 0.0 0.0 3.1774 0.0 0.0 0.0 350.2614780986417 350.2614780986417 7.402953031565854 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.3807196863200844 {[{M(Oxidation (M))|F}H]|[RQ]}E 3.1774 - 73 1 1.179 201316.2 1.0 7950 5477 13420 HBL1_DMSO_200M_050219_1,13429 HBL1_DMSO_200M_050219_1,13429,LLPTVGAP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13430 67.632 403.0 383760.0 25 0 52590.0 + 5858 DPWARGSYSYV 11 138 650.8018326472433 1299.5891123612864 2 650.8026611208916 MULTI CID FTMS 0 0 0 13420 434971.25 1.0 0 0.0 10 Unmodified _DPWARGSYSYV_ ENSG00000004487|ENST00000400181|KDM1A;ENST00000602503.1_1_1:23408727-23408946:+|nuORF;nc|ENSG00000004487|O60341|KDM1A 42.83518252547288 0.1687213420692654 3 [DP]WA[KG]YSDY 10 4 58.695 0.0 0.0 4.5164 0.0 0.0 0.0 114.05694237817184 114.05694237817184 41.31395887298318 0.0 0.0 0.0 0 2.1861818737241734 1.5228787452803376 0.8494850021680094 0.0 [DP]WA[KG]YSDY 4.5164 - 1743 1 1.179 116688.7 1.0 7951 5477 13420 HBL1_DMSO_200M_050219_1,13430 HBL1_DMSO_200M_050219_1,13430,DPWARGSYSYV False True DPWARGSYSYV 67.631942 650.802661120892 4553784.0 13420.0 ENSG00000004487|ENST00000400181|KDM1A;;ENST00000602503.1_1_1:23408727-23408946:+|nuORF;;nc|ENSG00000004487|O60341|KDM1A 7.344528039296468 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13431 67.636 214.0 918760.0 25 0 143390.0 + 1444 NAAIIMKV 8 134 430.74960082220895 859.4846487112179 2 430.7519103884697 MULTI CID FTMS 0 0 0 13420 399485.9375 0.6059686026679864 -2 0.1765899658203125 11 Unmodified _ALEGLKMV_ ENSG00000130755|ENST00000597595|GMFG 24.67388899826682 0.525179942228231 3 {[DA]|[EG]}A{I|L}{I|L}MKV 8 5 + 67.446 0.0 0.0 7.8473 7.8473 89.819 0.0 0.0 0.0 7.659167939666318 6.320232147054057 6.320232147054057 6.320232147054057 0 1.4802046884880935 1.6989700043360187 0.0 0.1989700043360188 {[DA]|[EG]}A{I|L}{I|L}MKV;{[DA]|[EG]}A{I|L}{I|L}MVK;[{I|L}A][{M(Oxidation (M))|F}V]GQ{I|L}{I|L};[{I|L}A]GTSW{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KGW{I|L}{I|L} 7.8473;7.1119;0.48449;0.29079;0.18784 -;-;-;-;- 200 + 1 1.179 154933.1 1.0 7952 5477 13420 HBL1_DMSO_200M_050219_1,13431 HBL1_DMSO_200M_050219_1,13431,ALEGLKMV False False NAAIIMKV 67.635985 430.75191038847 0.0 13420.0 ENSG00000130755|ENST00000597595|GMFG 4.534974733988444 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13432 67.645 488.0 339870.0 25 0 46784.0 + 22639 LPYPSSATL 9 170 474.7558571246346 947.4971613160692 2 474.7561523318291 MULTI CID FTMS 0 0 0 13420 375875.09375 1.0 0 0.0 12 Unmodified _LPYPSSATL_ ENSG00000110422|ENST00000303296|HIPK3;nc|ENSG00000110422|Q9H422-2|HIPK3 63.562846038646086 0.0241094678104353 3 [DP]{I|L}[YR]AT{I|L} 8 5 + 55.227 0.0 0.0 5.8287 5.8287 75.952 0.0 0.0 0.0 2.329666607012186 16.40978057358332 2.329666607012186 0.4980376447570478 0 0.5 0.8860566476931632 1.8001648626366045 0.0 [DP]{I|L}[YR]AT{I|L};[DP]{I|L}[YN]{I|L}T{I|L};[{I|L}P]D[YR]AT{I|L};[{I|L}P]D[YN]{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[RD]AT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[DN]{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[CP]|[EA]}AAT{I|L};[{I|L}P]S{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}T{I|L};[{I|L}P]Y[RD]AT{I|L};[{I|L}P]S{M(Oxidation (M))|F}{[TV]|[{I|L}S]}AT{I|L} 5.8287;5.7762;5.5829;5.5303;5.3804;5.3279;5.3264;5.3022;5.2781;5.2524 -;-;-;-;-;-;-;-;-;- 1940 1 1.179 128791.0 1.0 7953 5477 13420 HBL1_DMSO_200M_050219_1,13432 HBL1_DMSO_200M_050219_1,13432,LPYPSSATL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13433 67.652 434.0 291010.0 25 0 37877.0 + 36331 SYNDYVREF 9 139 596.7670314957832 1191.5195100583662 2 596.7679931521416 MULTI CID FTMS 0 0 0 13420 367997.65625 0.0955348049075347 3 -0.2780914306640625 13 Unmodified _SYNDYVREF_ ENSG00000083896|ENST00000344157|YTHDC1;nc|ENSG00000083896|Q96MU7-2|YTHDC1 35.61225514009592 0.0995432151795903 3 [{I|L}T]ATYYDN[MT] 10 9 + 49.095 0.0 0.0 4.1204 4.1204 70.96 0.0 0.0 0.0 0.8419917959325574 0.8419917959325574 0.8419917959325574 0.8419917959325574 0 0.9916440611282626 1.154901959985743 0.0 0.3807196863200844 [{I|L}T]ATYYDN[MT];{[{M(Oxidation (M))|F}C]|[YS]}NDYVRE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HA]VYDN[MT];{[{M(Oxidation (M))|F}C]|[YS]}NDYV{[TV]|[{I|L}S]}[MT];{[{M(Oxidation (M))|F}C]|[YS]}GGDYVRE{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}NDYV[MT]S{I|L};{[{M(Oxidation (M))|F}C]|[YS]}NDYV[MT]TV;[{I|L}T]ATYYDGG[MT];{[{M(Oxidation (M))|F}C]|[YS]}NDYV[{M(Oxidation (M))|F}V]SV;[QP][QP]VYDN[MT] 4.1204;4.0497;3.3608;3.285;3.2769;3.1289;3.0823;3.0317;2.8274;2.8209 -;+;-;-;-;-;-;-;-;- + 535 1 1.179 98537.5 1.0 7954 5477 13420 HBL1_DMSO_200M_050219_1,13433 HBL1_DMSO_200M_050219_1,13433,SYNDYVREF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13434 67.66 459.0 867580.0 25 0 133320.0 + -1 DTMMDSTQEYY 11 185 708.2534970651393 1414.4924411970785 2 708.2545654177666 MULTI CID FTMS 0 0 0 13420 350038.0625 0.1689861720979253 -3 0.2412185668945312 14 2 Oxidation (M) _DTM(Oxidation (M))M(Oxidation (M))DSTQEYY_ REV__ENSG00000078674|ENST00000325083|PCM1;REV__nc|ENSG00000078674|Q15154-2|PCM1;REV__nc|ENSG00000078674|Q15154-4|PCM1;REV__nc|ENSG00000078674|Q15154-5|PCM1 12.240655878213236 0.7805268987462184 3 YYDGDD[NG]GNYY 12 -1 + 65.935 0.0 0.0 4.6614 4.6614 71.877 0.0 0.0 0.0 0.4568744131014171 11.077184142563468 0.4568744131014171 0.4568744131014171 0 0.6694451763165201 2.0 2.0400990676322905 0.0 YYDGDD[NG]GNYY;[YN]G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]S[NG]GNYY;YYDGMD[DP]NYY;YYDMGD[DP]NYY;YYDGMD[NP]DYY;YYDMGD[NP]DYY;YYDGM{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY;YYDGMD[DP]GGYY;[YN]G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]MPSNYY;YYDMG{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}YY 4.6614;4.6291;4.4654;4.2715;4.1281;3.9342;3.8735;3.82;3.8023;3.6796 -;-;-;-;-;-;-;-;-;- 7783 1 1.179 277801.1 1.0 7955 5477 13420 HBL1_DMSO_200M_050219_1,13434 HBL1_DMSO_200M_050219_1,13434,DTMMDSTQEYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13435 67.672 604.0 401110.0 25 0 69992.0 + 43961 YGYSLKGI 8 188 450.7438196702572 0 450.7435485720634 PEAK CID FTMS 0 0 0 13420 283893.15625 1.0 0 0.0 15 Unmodified _YGYSLKGI_ ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU 32.30548876998284 0.2094692153732555 3 GYS{I|L}K 5 3 16.402 0.0 0.0 1.8235 0.0 0.0 163.06100195425364 185.09369836978752 348.1547003240412 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + GYS{I|L}K 1.8235 + + 251 + 1 1.179 184910.0 1.0 7956 5477 13420 HBL1_DMSO_200M_050219_1,13435 HBL1_DMSO_200M_050219_1,13435,YGYSLKGI False True YGYSLKGI 67.672187 450.743548572063 1395392.875 13420.0 ENSG00000153187|ENST00000640218|HNRNPU;;nc|ENSG00000153187|Q00839-2|HNRNPU 4.597094694773356 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13436 67.682 534.0 554900.0 25 0 24761.0 + 40928 VLSRFLQSL 9 215 531.8176890956478 0 531.8187133669853 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _VLSRFLQSL_ REV__ENSG00000135119|ENST00000257575|RNFT2;REV__ENST00000547718.5_1_12:117186478-117290514:+|nuORF;REV__nc|ENSG00000135119|Q96EX2-3|RNFT2;REV__nc|ENSG00000135119|Q96EX2-4|RNFT2;REV__nc|ENSG00000135119|Q96EX2-5|RNFT2 24.67388899826682 0.1587009629985955 3 AV{M(Oxidation (M))|F} 3 -1 11.198 0.0 0.0 1.0548 0.0 0.0 99.21704771157528 642.2139376275999 741.4309853391752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AV{M(Oxidation (M))|F} 1.0548 - 697 + 1 1.179 232727.0 1.0 7957 5477 13420 HBL1_DMSO_200M_050219_1,13436 HBL1_DMSO_200M_050219_1,13436,VLSRFLQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13437 67.691 541.0 653490.0 25 0 86817.0 + -1 CCSHQCCSSVC 11 207 722.7327202408195 0 722.7329589724541 PEAK CID FTMS 0 0 0 13420 245647.90625 0.2814184818136839 -1 0.0954055786132812 17 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))SHQC(Carbamidomethyl (C))C(Carbamidomethyl (C))SSVC(Carbamidomethyl (C))_ REV__ENSG00000212659|ENST00000391355|KRTAP9-6 2.9952420565917617 0.4761840153648598 3 YYYDY 5 -1 27.779 0.0 0.0 1.9245 0.0 0.0 180.0654638197264 493.07334314517817 673.1388069649046 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.0 YYYDY 1.9245 - 1661 + 1 1.179 243915.0 1.0 7958 5477 13420 HBL1_DMSO_200M_050219_1,13437 HBL1_DMSO_200M_050219_1,13437,CCSHQCCSSVC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13438 67.701 556.0 393680.0 25 0 18522.0 + 37002 TFPAYPGSSSM 11 225 572.7530876818781 1143.4916224305562 2 572.7530395388603 MULTI CID FTMS 0 0 0 13420 205063.75 0.3008017449878676 3 -0.2780914306640625 18 Unmodified _TFPAYPGSSSM_ ENSG00000004975|ENST00000005340|DVL2;ENST00000571745.1_1_17:7130492-7131139:-|nuORF;ENST00000576840.5_1_17:7130280-7131353:-|nuORF 21.53697664764585 0.586507868110548 3 [{I|L}T]AMV[PA]{I|L} 8 9 14.395 0.0 0.0 1.2589 0.0 0.0 0.0 343.9961980351199 343.9961980351199 0.9003417837539747 0.0 0.0 0.0 0 0.2614393726401688 0.3979400086720376 0.7658715643802767 0.0 [{I|L}T]AMV[PA]{I|L} 1.2589 - 5432 1 1.179 159895.5 1.0 7959 5477 13420 HBL1_DMSO_200M_050219_1,13438 HBL1_DMSO_200M_050219_1,13438,TFPAYPGSSSM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13439 67.715 774.0 330550.0 25 0 22013.0 + 39550 VAYGKTKIFI 10 265 380.5654483253312 1138.6745155761937 3 380.5655395388603 MULTI CID FTMS 0 0 0 13420 198664.203125 1.0 0 0.0 19 Unmodified _VAYGKTKIFI_ ENSG00000176658|ENST00000318217|MYO1D;ENST00000585094.1_1_17:30986131-31048108:-|nuORF 24.95707706330732 0.4079579053029958 3 VAYGK[K{I|L}]T{M(Oxidation (M))|F}{I|L} 10 2 + 59.7 0.0 0.0 5.2429 5.2429 82.481 0.0 0.0 0.0 28.081144737610856 8.450980400142562 8.450980400142562 6.656205609827246 0 0.2614393726401688 1.154901959985743 0.8703715150305282 0.0 VAYGK[K{I|L}]T{M(Oxidation (M))|F}{I|L};VAYGKT[K{I|L}]{M(Oxidation (M))|F}{I|L};VAYGK[K{I|L}]T{I|L}{M(Oxidation (M))|F};VAYGKT[K{I|L}]{I|L}{M(Oxidation (M))|F};VAYGK[K{I|L}][YV]V;VA[KP]SH[K{I|L}]{M(Oxidation (M))|F}{I|L};VA[KP]SH[K{I|L}]{I|L}{M(Oxidation (M))|F};V[YQ]K[K{I|L}]T{M(Oxidation (M))|F}{I|L};V[YQ]KT[K{I|L}]{M(Oxidation (M))|F}{I|L};V[YQ]K[K{I|L}]T{I|L}{M(Oxidation (M))|F} 5.2429;4.6584;4.5008;3.9162;2.6566;2.5675;1.8253;1.7748;1.1903;1.0326 -;+;-;-;-;-;-;-;-;- + 779 + 1 1.179 201414.8 1.0 7960 5477 13420 HBL1_DMSO_200M_050219_1,13439 HBL1_DMSO_200M_050219_1,13439,VAYGKTKIFI False True VAYGKTKIFI 67.715416 380.56553953886 1145898.125 13420.0 ENSG00000176658|ENST00000318217|MYO1D;;ENST00000585094.1_1_17:30986131-31048108:-|nuORF 3.826048851013184 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13440 67.724 462.0 181740.0 25 0 10470.0 -1 0 118 590.9227428780652 1769.7463992343953 3 590.9235717654228 MULTI CID FTMS 0 0 0 13420 196108.453125 0.6249717912370287 -1 0.0954055786132812 20 3 Q 1 -1 15.986 0.0 0.0 0.9033 0.0 0.0 1623.6768629568546 0.0 1623.6768629568546 0.0 1.0376984746053886 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 Q 0.9033 - 234 + 1 1.179 68270.8 1.0 7961 5477 13420 HBL1_DMSO_200M_050219_1,13440 HBL1_DMSO_200M_050219_1,13440, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13442 67.728 1.8 22100000.0 25 0 2405700.0 + 2965 AVIDVGINRV 10 51 528.3142700001846 0 528.3147460818291 PEAK CID FTMS 0 0 0 13441 16211250.0 0.3248151761825166 1 -0.0339889526367187 1 Unmodified _AVIDVGINRV_ ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2 24.99096001346401 0.2580721372233971 3 {I|L}DVVA 5 7 35.701 0.0 0.0 3.3852 0.0 0.0 170.10386250754988 384.1998690240844 554.3037315316343 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}DVVA 3.3852 - 39 + 1 1.175 38533.0 1.0 7962 5478 13441 HBL1_DMSO_200M_050219_1,13442 HBL1_DMSO_200M_050219_1,13442,AVIDVGINRV False True AVIDVGINRV 67.727753 528.314746081829 821310816.0 13441.0 nc|ENSG00000065911|P13995-2|MTHFD2;;ENSG00000065911|ENST00000394053|MTHFD2 6.527839819590251 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13443 67.729 4.1 13286000.0 25 0 2120400.0 + 3628 DADYAIKI 8 66 454.739735521762 907.464918110324 2 454.7400695681572 MULTI CID FTMS 0 0 0 13441 10072126.0 0.5414115527781505 1 -0.0339889526367187 2 Unmodified _DADYAIKI_ ENSG00000143368|ENST00000271628|SF3B4;ENST00000553618.1_1_14:67665960-67666731:+|nuORF 61.357469665136826 0.1155423183535659 3 {[DA]|[EG]}DYA{I|L}K{I|L} 8 0 + 79.148 0.0 0.0 8.7219 8.7219 83.599 0.0 0.0 0.0 25.7319095436452 0.8715017571890087 0.8715017571890087 0.8715017571890087 0 1.7302046884880935 2.0 0.0 0.3252574989159953 + + {[DA]|[EG]}DYA{I|L}K{I|L};{[DA]|[EG]}DYA{I|L}{I|L}K 8.7219;8.6259 +;- + 102 + 1 1.175 52254.6 1.0 7963 5478 13441 HBL1_DMSO_200M_050219_1,13443 HBL1_DMSO_200M_050219_1,13443,DADYAIKI True True DADYAIKI 67.72893 454.740069568157 430252960.0 13441.0 ENSG00000143368|ENST00000271628|SF3B4;;ENST00000553618.1_1_14:67665960-67666731:+|nuORF 5.705564816792806 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13444 67.73 4.5 10937000.0 25 0 932590.0 + 13904 HVVEILVET 9 59 519.79495259044 1037.5753522476798 2 519.7952148318291 MULTI CID FTMS 0 0 0 13441 12394991.0 0.8687363328997242 -1 0.125762939453125 3 Unmodified _HVVEILVET_ ENSG00000170779|ENST00000336219|CDCA4 57.47134341890925 0.0274820932774257 3 [HV]VE{I|L}{I|L}VET 9 0 + 60.384 0.0 0.0 5.8197 5.8197 82.594 0.0 0.0 0.0 18.74143652831457 41.09243748081781 18.74143652831457 4.771212547196626 0 0.6237125054200234 1.3979400086720375 0.3054621874040891 0.0 + + [HV]VE{I|L}{I|L}VET;[HV]VE{I|L}V{I|L}ET;[HV]{I|L}D{I|L}{I|L}VET;[HV]{I|L}D{I|L}V{I|L}ET;{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}{I|L}VET;{NN|[MP]|[D{I|L}]|[EV]}[{I|L}V]H{I|L}VET;{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}V{I|L}ET;[HV]V{I|L}{I|L}EVET;[HV]{I|L}E{I|L}VVET;{NN|[MP]|[D{I|L}]|[EV]}[{I|L}V]HV{I|L}ET 5.8197;5.3599;5.2395;4.7796;3.8547;3.3948;3.3948;3.3347;3.16;2.935 +;-;-;-;-;-;-;-;-;- + 186 1 1.175 46181.1 1.0 7964 5478 13441 HBL1_DMSO_200M_050219_1,13444 HBL1_DMSO_200M_050219_1,13444,HVVEILVET True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13445 67.731 4.4 22688000.0 25 0 2889500.0 + 21907 LPPHIIRL 8 68 320.21154587615865 957.612808228676 3 320.2113220095634 MULTI CID FTMS 0 0 0 13441 7454952.5 0.410630416169831 4 -0.3221054077148437 4 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 36.12702656103203 0.299085846329477 3 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 0 + 71.121 0.0 0.0 7.4269 7.4269 84.933 0.0 0.0 0.0 60.15153777800478 12.98455006504028 12.98455006504028 3.0102999566398125 0 0.0 1.3979400086720375 0.0 0.5994850021680094 + + {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 7.4269;7.1125;6.4585;4.6843 +;-;-;- + 92 + 1 1.175 85825.4 1.0 7965 5478 13441 HBL1_DMSO_200M_050219_1,13445 HBL1_DMSO_200M_050219_1,13445,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13446 67.732 10.0 4865500.0 25 0 847350.0 41388 VPKVPGVL 8 55 404.7682930862987 807.5220332393974 2 404.7681762576103 MULTI CID FTMS 0 0 0 13441 5698659.5 0.6039965252491251 1 -0.0339889526367187 5 Unmodified _VPKVPGVL_ ENST00000309859.8_1_16:23503092-23504756:-|nuORF 40.44857923139169 0.2267865117615937 3 [VP]KVGPV{I|L} 8 2 + 76.094 0.0 0.0 9.4231 9.4231 86.41 0.0 0.0 0.0 22.21848749616356 69.10396270529162 22.21848749616356 2.218487496163561 0 1.424742501084005 1.5228787452803376 0.0 0.3252574989159953 [VP]KVGPV{I|L};[VP]KGVPV{I|L};[VP]GVKPV{I|L};[VP]GKVPV{I|L};[VP]GVPKV{I|L} 9.4231;9.1484;8.6475;8.5275;7.4375 -;-;-;-;- 193 1 1.175 42524.6 1.0 7966 5478 13441 HBL1_DMSO_200M_050219_1,13446 HBL1_DMSO_200M_050219_1,13446,VPKVPGVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13447 67.734 8.6 4793300.0 25 0 485650.0 + 41352 VPKALEPYV 9 79 508.2952236047429 1014.5758942762858 2 508.2952758669853 MULTI CID FTMS 0 0 0 13441 5592888.5 0.7680654855827952 -1 0.125762939453125 6 Unmodified _VPKALEPYV_ ENSG00000183434|ENST00000310125|TFDP3;ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1 30.63653989081413 0.1413794767160703 3 [VP][WR]VPYV 8 4 [VP][WR]V + + 32.435 11.171 1.7526 3.1969 3.1969 50.573 0.0 0.0 0.0 0.0 16.23712505420023 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 [VP][WR]VPYV 3.1969 - 147 + 1 1.175 37499.7 1.0 7967 5478 13441 HBL1_DMSO_200M_050219_1,13447 HBL1_DMSO_200M_050219_1,13447,VPKALEPYV False True VPKALEPYV 67.733647 508.295275866985 184062876.0 13441.0 ENSG00000198176|ENST00000375370|TFDP1;;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;;nc|ENSG00000198176|Q14186-2|TFDP1;;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;;ENSG00000183434|ENST00000310125|TFDP3 4.486032644907634 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13448 67.735 14.0 3498300.0 25 0 943450.0 19561 LFRPRRPR 8 46 549.3428286207777 1096.671104308355 2 549.3431274294853 MULTI CID FTMS 0 0 0 13441 2705628.25 0.3086966817506898 -2 0.2211685180664062 7 Unmodified _LFRPRRPR_ ENSG00000134909|ENST00000682385|ARHGAP32;nc|ENSG00000134909|A7KAX9-2|ARHGAP32;nc|ENSG00000134909|A7KAX9|ARHGAP32 5.760428011301431 0.7893668129297577 3 {M(Oxidation (M))|F} 1 7 2.4743 0.0 0.0 0.22561 0.0 0.0 864.5123193735882 82.06688867740468 946.5792080509927 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.22561 + + 2 + 1 1.175 44243.7 1.0 7968 5478 13441 HBL1_DMSO_200M_050219_1,13448 HBL1_DMSO_200M_050219_1,13448,LFRPRRPR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13449 67.736 22.0 2025800.0 25 0 146600.0 + 25012 MPQIETRVI 9 68 543.8023031137895 1085.590053294379 2 543.8025390505791 MULTI CID FTMS 0 0 0 13441 2000653.5 0.6897558260373103 -1 0.125762939453125 8 Unmodified _MPQIETRVI_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 29.43715596616401 0.1566398223704148 3 MPQ{I|L}E 5 4 75.745 0.0 0.0 6.9773 0.0 0.0 0.0 484.2896822565063 484.2896822565063 51.308422131034845 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.3807196863200844 0.8494850021680094 + MPQ{I|L}E 6.9773 + + 42 + 1 1.175 41442.2 1.0 7969 5478 13441 HBL1_DMSO_200M_050219_1,13449 HBL1_DMSO_200M_050219_1,13449,MPQIETRVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13450 67.737 34.0 1976500.0 25 0 190860.0 + 5701 DPIVNRWYN 9 95 588.7908184564778 1175.5670839797556 2 588.7911254763603 MULTI CID FTMS 0 0 0 13441 1733886.625 0.7617789646509691 -1 0.125762939453125 9 Unmodified _DPIVNRWYN_ REV__ENSG00000038002|ENST00000264595|AGA;REV__ENST00000506853.5_1_4:178355638-178363529:-|nuORF;REV__ENST00000510955.5_1_4:178358517-178361430:-|nuORF 43.85829265575387 0.0542763391141878 3 DP{I|L}QQ{I|L} 6 -1 87.428 0.0 0.0 7.4371 0.0 0.0 0.0 478.18076502017817 478.18076502017817 51.977890027340976 0.0 0.0 0.0 0 2.2302046884880937 2.0 0.0 1.0 DP{I|L}QQ{I|L} 7.4371 - 1475 + 1 1.175 56508.6 1.0 7970 5478 13441 HBL1_DMSO_200M_050219_1,13450 HBL1_DMSO_200M_050219_1,13450,DPIVNRWYN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13451 67.738 34.0 1612500.0 25 0 191260.0 + -1 YKSMCEECCF 10 62 715.2481919250682 1428.4818309169364 2 715.2485229372978 MULTI CID FTMS 0 0 0 13441 1284189.25 0.6141613389804894 -1 0.125762939453125 10 3 Carbamidomethyl (C),Oxidation (M) _YKSM(Oxidation (M))C(Carbamidomethyl (C))EEC(Carbamidomethyl (C))C(Carbamidomethyl (C))F_ REV__ENSG00000146463|ENST00000314607|ZMYM4;REV__nc|ENSG00000146463|Q5VZL5-2|ZMYM4;REV__nc|ENSG00000146463|Q5VZL5-3|ZMYM4;REV__nc|ENSG00000146463|Q5VZL5-4|ZMYM4 0.3506318815782774 0.7250146139312247 3 YYYD 4 -1 64.24 0.0 0.0 4.4971 0.0 0.0 0.0 821.243022398479 821.243022398479 50.07129707683461 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.0 YYYD 4.4971 - 26 + 1 1.175 45867.9 1.0 7971 5478 13441 HBL1_DMSO_200M_050219_1,13451 HBL1_DMSO_200M_050219_1,13451,YKSMCEECCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13452 67.74 37.0 2330900.0 25 0 379910.0 + 15169 IPDGGVHII 9 96 460.76359746172113 919.5126419902424 2 460.7636291384697 MULTI CID FTMS 0 0 0 13441 1246570.0 0.6230419746897475 -1 0.125762939453125 11 Unmodified _IPDGGVHII_ ENSG00000183808|ENST00000520560|RBM12B 36.04419817259434 0.0971720506436186 3 {I|L}PD{[NV]|[RG]}H{I|L}{I|L} 8 2 + 67.939 0.0 0.0 7.3886 7.3886 93.114 0.0 0.0 0.0 37.79609694211449 10.840063812049138 10.840063812049138 10.981362441963334 0 1.1989700043360187 1.5228787452803376 0.4247425010840047 0.4247425010840047 {I|L}PD{[NV]|[RG]}H{I|L}{I|L};{I|L}DP{[NV]|[RG]}H{I|L}{I|L};[HV]NDP{I|L}{I|L}{I|L};[HV]{I|L}DNP{I|L}{I|L};[HV]N{I|L}DP{I|L}{I|L};[HV]GGDP{I|L}{I|L}{I|L};[DP]{[NV]|[RG]}H{I|L}{I|L}{I|L};[HV]ND{I|L}P{I|L}{I|L};[HV]{I|L}NDP{I|L}{I|L};[H{I|L}]VDNP{I|L}{I|L} 7.3886;6.1943;5.954;5.1177;5.0316;4.9467;4.9028;4.8401;4.7904;4.7406 -;-;-;-;-;-;-;-;-;- 671 + 1 1.175 72248.9 1.0 7972 5478 13441 HBL1_DMSO_200M_050219_1,13452 HBL1_DMSO_200M_050219_1,13452,IPDGGVHII True True IPDGGVHII 67.739539 460.76362913847 49492752.0 13441.0 ENSG00000183808|ENST00000520560|RBM12B 1.7976107100645702 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13453 67.741 46.0 1024700.0 25 0 184650.0 -1 NIAHMYQV 8 83 496.2378532511517 990.4611535691032 2 496.7416564822197 MULTI CID FTMS 0 0 0 13441 1159820.0 0.1602170670366597 -8 0.6582489013671875 12 Oxidation (M) _NIAHM(Oxidation (M))YQV_ ENSG00000107077|ENST00000381309|KDM4C;nc|ENSG00000293552|Q9H3R0-2|KDM4C 10.183394434864962 0.7604730176254005 3 [KS]YAEM 6 -1 24.922 0.0 0.0 2.5162 0.0 0.0 0.0 278.1155184381469 278.1155184381469 9.436974992327125 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [KS]YAEM 2.5162 - 101 + 1 1.175 40138.1 1.0 7973 5478 13441 HBL1_DMSO_200M_050219_1,13453 HBL1_DMSO_200M_050219_1,13453,NIAHMYQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13454 67.742 32.0 1157700.0 25 0 68322.0 + 25049 MPTQWRTI 8 80 516.7679023072649 1031.5212516813297 2 516.7673828005791 MULTI CID FTMS 0 0 0 13441 995340.1875 0.3524025417772933 1 -0.0339889526367187 13 Unmodified _MPTQWRTI_ ENSG00000096401|ENST00000371477|CDC5L 13.90604991867851 0.7054780292895731 3 MPTQN 5 4 47.792 0.0 0.0 4.6331 0.0 0.0 0.0 457.2576998346313 457.2576998346313 31.76091259055681 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 MPTQN 4.6331 - 83 + 1 1.175 36088.5 1.0 7974 5478 13441 HBL1_DMSO_200M_050219_1,13454 HBL1_DMSO_200M_050219_1,13454,MPTQWRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13455 67.743 34.0 1366000.0 25 0 140030.0 + 31539 RQLEAIVRI 9 71 366.5646406976726 1096.6720926932178 3 366.5645019412041 MULTI CID FTMS 0 0 0 13441 919148.4375 0.2139581635018852 -3 0.3023529052734375 14 Unmodified _RQLEAIVRI_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 60.07390631473393 0.0260411565414776 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EA{I|L}V{I|L}R 9 2 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L} + + 44.346 16.597 4.1781 4.0437 4.0437 52.645 0.0 0.0 0.0 0.0 20.970325397914564 0.0 0.0 0 1.274227503252014 0.0 0.5 0.3494850021680094 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EA{I|L}V{I|L}R 4.0437 - 114 + 1 1.175 46303.0 1.0 7975 5478 13441 HBL1_DMSO_200M_050219_1,13455 HBL1_DMSO_200M_050219_1,13455,RQLEAIVRI True True RQLEAIVRI 67.743164 366.564501941204 59931252.0 13441.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 4.233590284983317 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13456 67.745 70.0 1074600.0 25 0 273470.0 19436 LEYRHRSL 8 80 537.2942810826698 1072.5740092321396 2 537.2918578982353 MULTI CID FTMS 0 0 0 13441 863944.0625 0.5997780451922794 1 -0.0339889526367187 15 Unmodified _LEYRHRSL_ ENST00000556883.1_1_14:93650687-93651102:-|nuORF 14.581692164780916 0.6954967302934248 3 [YE]{I|L} 3 5 29.494 0.0 0.0 2.7498 0.0 0.0 0.0 664.3601064235235 664.3601064235235 13.295671638727027 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.0 [YE]{I|L} 2.7498 - 33 1 1.175 62404.6 1.0 7976 5478 13441 HBL1_DMSO_200M_050219_1,13456 HBL1_DMSO_200M_050219_1,13456,LEYRHRSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13457 67.747 94.0 915760.0 25 0 149990.0 + 34292 SLRDPRTV 8 119 472.2712481786904 942.5279434241808 2 472.2697631716728 MULTI CID FTMS 0 0 0 13441 816605.9375 0.8183328755965323 -2 0.2211685180664062 16 Unmodified _SLRDPRTV_ REV__ENST00000460138.5_1_6:7882444-7882522:-|nuORF 14.581692164780916 0.6954967302934248 3 Y 1 -1 14.604 0.0 0.0 1.5495 0.0 0.0 761.4534175226167 0.0 761.4534175226167 0.0 -1.1666009493360718 -1.1666009493360718 0.0 0 0.0 0.0 0.0 0.0 Y 1.5495 - 68 + 1 1.175 70920.2 1.0 7977 5478 13441 HBL1_DMSO_200M_050219_1,13457 HBL1_DMSO_200M_050219_1,13457,SLRDPRTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13458 67.752 275.0 1124400.0 25 0 169340.0 + 43597 YAFNMKATV 9 114 1044.518041157155 1043.510764690555 1 1044.519091784954 MULTI CID FTMS 0 0 0 13441 800394.3125 0.1925380771470003 -7 0.5650405883789062 17 Unmodified _YAFNMKATV_ ENSG00000109971|ENST00000534624|HSPA8 129.77232118876745 0.0070583558836035 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NMKATV 9 0 + 104.85 0.0 0.0 10.048 10.048 97.316 0.0 0.0 0.0 15.639654727234046 16.478174818886373 15.639654727234046 15.639654727234046 0 1.6989700043360187 1.2218487496163564 1.394599018282542 1.610924374808178 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NMKATV;[MN]{M(Oxidation (M))|F}S{M(Oxidation (M))|F}KATV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GGMKATV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[MN]{M(Oxidation (M))|F}KATV;[MN]YA{M(Oxidation (M))|F}KATV;[MN]{M(Oxidation (M))|F}AYKATV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}KATV;[MN]{M(Oxidation (M))|F}SK{M(Oxidation (M))|F}ATV;[MN]K{M(Oxidation (M))|F}S{M(Oxidation (M))|F}ATV;[MN]K{M(Oxidation (M))|F}AYATV 10.048;8.5488;8.3932;7.9254;7.2111;6.9613;6.6415;6.4746;6.3642;6.0757 +;-;-;-;-;-;-;-;-;- + 5905 1 1.175 203892.1 1.0 7978 5478 13441 HBL1_DMSO_200M_050219_1,13458 HBL1_DMSO_200M_050219_1,13458,YAFNMKATV True True YAFNMKATV 67.751997 1044.51909178495 2432386860.0 13441.0 ENSG00000109971|ENST00000534624|HSPA8 9.794102986653646 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13459 67.754 88.0 2539000.0 25 0 302150.0 26009 NLVRVESR 8 152 486.7831341259952 971.5517153187903 2 486.7838012576103 MULTI CID FTMS 0 0 0 13441 721619.0 0.2382487658050048 4 -0.3221054077148437 18 Unmodified _NLVRVESR_ ENSG00000124177|ENST00000373233|CHD6 7.910154910731844 0.7763180056447161 3 {I|L} 1 7 11.783 0.0 0.0 1.2128 0.0 0.0 840.4567273810935 0.0 840.4567273810935 0.0 1.1868045789730175 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2128 + + 143 + 1 1.175 169857.4 1.0 7979 5478 13441 HBL1_DMSO_200M_050219_1,13459 HBL1_DMSO_200M_050219_1,13459,NLVRVESR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13460 67.756 99.0 532130.0 25 0 41260.0 + 13815 HTLGDAHIYL 10 91 570.2981556836663 1138.5817584341326 2 570.2965576052666 MULTI CID FTMS 0 0 0 13441 537047.1875 0.2098363117768585 7 -0.46502685546875 19 Unmodified _HTLGDAHIYL_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 20.453626601364224 0.5043500229302764 3 [Y{I|L}][RH]{M(Oxidation (M))|F}QY{I|L} 8 7 [Y{I|L}][RH]{M(Oxidation (M))|F} + + 15.058 6.1709 0.86141 1.3226 1.3226 48.472 0.0 0.0 0.0 0.0 0.8772416797253495 0.0 0.0 0 0.0 0.0 0.0 0.0 [Y{I|L}][RH]{M(Oxidation (M))|F}QY{I|L} 1.3226 - 96 + 1 1.175 46952.0 1.0 7980 5478 13441 HBL1_DMSO_200M_050219_1,13460 HBL1_DMSO_200M_050219_1,13460,HTLGDAHIYL False True HTLGDAHIYL 67.756097 570.296557605267 3525777.75 13441.0 ENSG00000176890|ENST00000323274|TYMS;;nc|ENSG00000176890|P04818-3|TYMS;;chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;;nc|ENSG00000176890|P04818-2|TYMS;;ENST00000581920.1_1_18:667730-672994:+|nuORF 3.9350798924764 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13461 67.758 60.0 1147600.0 25 0 96458.0 + 29649 QNGTFSYITV 10 106 565.2819386909483 0 565.2833740115166 PEAK CID FTMS 0 0 0 13441 507873.0625 0.078783542177414 -5 0.3984909057617187 20 Unmodified _QNGTFSYITV_ REV__ENSG00000154237|ENST00000388948|LRRK1;REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF 19.256988751693697 0.3042552096208299 3 SAENAM 6 -1 39.954 0.0 0.0 3.5403 0.0 0.0 75.08174739967156 447.2370699518188 522.3188173514903 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3807196863200844 SAENAM 3.5403 - 178 + 1 1.175 56249.5 1.0 7981 5478 13441 HBL1_DMSO_200M_050219_1,13461 HBL1_DMSO_200M_050219_1,13461,QNGTFSYITV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13463 67.762 112.0 605570.0 25 0 76913.0 40139 VGLSDVEL 8 96 416.2266014676928 830.4386500021856 2 416.2267028689384 MULTI CID FTMS 0 0 0 13462 690435.0625 0.0500723388527112 5 -0.3974151611328125 1 Unmodified _VGLSDVEL_ ENSG00000170153|ENST00000515673|RNF150;nc|ENSG00000170153|Q9ULK6-2|RNF150;nc|ENSG00000170153|Q9ULK6-4|RNF150 26.34127834903884 0.4900704351052977 3 DD{I|L}K 4 7 35.846 0.0 0.0 4.3166 0.0 0.0 0.0 356.18634973697505 356.18634973697505 4.56546859611089 0.0 0.0 0.0 0 0.6549471895720985 1.6989700043360187 0.0 0.0 DD{I|L}K 4.3166 - 141 + 1 1.175 58186.9 1.0 7982 5479 13462 HBL1_DMSO_200M_050219_1,13463 HBL1_DMSO_200M_050219_1,13463,VGLSDVEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13464 67.77 432.0 747710.0 25 0 97807.0 + 41849 VPYLFKKV 8 179 331.87596361904207 992.6060614573262 3 331.8759033083916 MULTI CID FTMS 0 0 0 13462 537589.9375 0.1025785140548646 5 -0.3974151611328125 2 Unmodified _VPYLFKKV_ ENSG00000100395|ENST00000216237|L3MBTL2;ENST00000466589.5_1_22:41601366-41623356:+|nuORF;ENST00000479978.5_1_22:41615341-41623356:+|nuORF;nc|ENSG00000100395|Q969R5-2|L3MBTL2;nc|ENSG00000100395|Q969R5-3|L3MBTL2 26.88365393820708 0.4786498634179528 3 VPY{I|L}{M(Oxidation (M))|F}KKV 8 0 + 56.827 0.0 0.0 5.725 5.725 80.568 0.0 0.0 0.0 25.617968113107068 3.429311254306846 3.429311254306846 3.429311254306846 0 0.555462187404089 0.9208187539523752 0.0 0.1989700043360188 + + VPY{I|L}{M(Oxidation (M))|F}KKV;VPY{I|L}{M(Oxidation (M))|F}KVK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{M(Oxidation (M))|F}KKVV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{I|L}YPVV;[Y{I|L}]{M(Oxidation (M))|F}PKKVV;[Y{I|L}]{M(Oxidation (M))|F}KKPVV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}KYPVV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{I|L}YVPV;[Y{I|L}]P{M(Oxidation (M))|F}KKVV;KK{M(Oxidation (M))|F}{I|L}YPVV 5.725;5.3795;4.1661;3.1188;3.0576;2.9901;2.8953;2.8953;2.8341;2.8155 +;-;-;-;-;-;-;-;-;- + 571 + 1 1.175 255611.3 1.0 7983 5479 13462 HBL1_DMSO_200M_050219_1,13464 HBL1_DMSO_200M_050219_1,13464,VPYLFKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13465 67.771 9.4 4615300.0 25 0 473170.0 -1 0 76 479.2843890451582 478.2771125785582 1 479.2852050662041 MULTI CID FTMS 0 0 0 13462 4092303.5 0.2579335958489133 -2 0.1597518920898437 3 3 [{M(Oxidation (M))|F}V]T{I|L} 4 -1 + 23.43 0.0 0.0 4.8988 4.8988 82.814 0.0 0.0 0.0 3.723637474483468 4.760167296381663 3.723637474483468 8.680993120779945 0 0.0 0.0 0.3252574989159953 0.0 [{M(Oxidation (M))|F}V]T{I|L};[{I|L}T][{M(Oxidation (M))|F}V] 4.8988;3.0837 -;- 44 + 1 1.175 39889.3 1.0 7984 5479 13462 HBL1_DMSO_200M_050219_1,13465 HBL1_DMSO_200M_050219_1,13465, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13466 67.772 27.0 2182400.0 25 0 200890.0 + 9789 FPAAIEHTI 9 97 499.7699076349976 0 499.7695190310478 PEAK CID FTMS 0 0 0 13462 2333704.5 1.0 0 0.0 4 Unmodified _FPAAIEHTI_ ENSG00000033178|ENST00000322244|UBA6;nc|ENSG00000033178|A0AVT1-2|UBA6 123.09622228370866 2.305354192674264e-05 3 PAA{I|L}EH 6 3 38.754 0.0 0.0 3.885 0.0 0.0 147.06837439646478 229.1200350397094 376.1884094361742 0.0 0.0 0.0 0.0 0 1.048455006504028 0.0 1.8539171939081167 0.0 + PAA{I|L}EH 3.885 + + 523 + 1 1.175 47828.0 1.0 7985 5479 13462 HBL1_DMSO_200M_050219_1,13466 HBL1_DMSO_200M_050219_1,13466,FPAAIEHTI True True FPAAIEHTI 67.77188 499.769519031048 14596872.0 13462.0 ENSG00000033178|ENST00000322244|UBA6;;nc|ENSG00000033178|A0AVT1-2|UBA6 5.784224510192871 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13467 67.774 111.0 590020.0 25 0 42894.0 + 28602 PVARYIGTV 9 109 488.2865621111135 974.558571289027 2 489.2963439822197 MULTI CID FTMS 0 0 0 13462 1307939.875 1.0 0 0.0 5 Unmodified _PVARYIGTV_ REV__ENSG00000104738|ENST00000649973|MCM4 12.531546534597751 0.4974689918368763 3 TV 2 -1 14.041 0.0 0.0 1.4408 0.0 0.0 756.431311012463 0.0 756.431311012463 0.0 0.5462187404089072 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 TV 1.4408 + + 109 + 1 1.175 53315.4 1.0 7986 5479 13462 HBL1_DMSO_200M_050219_1,13467 HBL1_DMSO_200M_050219_1,13467,PVARYIGTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13468 67.776 80.0 1277000.0 25 0 102450.0 + -1 PVPRSLML 8 109 464.7697386076133 927.5249242820264 2 464.7690002322197 MULTI CID FTMS 0 0 0 13462 923846.625 0.6077550978453264 5 -0.3974151611328125 6 Oxidation (M) _PVPRSLM(Oxidation (M))L_ REV__ENSG00000064787|ENST00000688948|BCAS1;REV__nc|ENSG00000064787|O75363-2|BCAS1;REV__nc|ENSG00000064787|O75363|BCAS1 10.183394434864962 0.7604730176254005 3 V 1 -1 10.379 0.0 0.0 1.119 0.0 0.0 810.4453858682555 0.0 810.4453858682555 0.0 0.334281652289512 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.119 + + 22 + 1 1.175 85661.8 1.0 7987 5479 13462 HBL1_DMSO_200M_050219_1,13468 HBL1_DMSO_200M_050219_1,13468,PVPRSLML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13469 67.779 149.0 637950.0 25 0 69388.0 + 44794 YPMRIDESI 9 130 562.2759418152597 1122.5373306973192 2 562.2762939333916 MULTI CID FTMS 0 0 0 13462 624338.125 0.4505787008115136 5 -0.3974151611328125 7 Unmodified _YPMRIDESI_ ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L 43.77239144664712 0.0547478964384323 3 YP{I|L}[MD]RES{I|L} 9 4 + 63.372 0.0 0.0 5.6455 5.6455 87.348 0.0 0.0 0.0 13.216948499452656 5.297633993969981 5.297633993969981 9.47621246364342 0 1.242992819099939 1.5228787452803376 0.6382104921644451 0.0 YP{I|L}[MD]RES{I|L};YP{I|L}[MD]RETV;YP{I|L}[MD]RDT{I|L};YP{I|L}[DV][WM]S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SKS{[WN]|[YH]}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[HQ]YES{I|L};Y{I|L}P[MD]RES{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SKS{[YC]|[HE]}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[HQ]YSE{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}KS{[WN]|[YH]}E{I|L} 5.6455;4.8013;4.428;4.4041;4.2838;4.0827;4.0445;4.0156;3.9725;3.8447 -;-;-;-;-;-;-;-;-;- 1563 + 1 1.175 77346.0 1.0 7988 5479 13462 HBL1_DMSO_200M_050219_1,13469 HBL1_DMSO_200M_050219_1,13469,YPMRIDESI True True YPMRIDESI 67.779024 562.276293933392 28073750.0 13462.0 nc|ENSG00000100129|Q9Y262-2|EIF3L;;ENSG00000100129|ENST00000652021|EIF3L 3.536985238393148 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13470 67.785 313.0 621570.0 25 0 36064.0 + 15491 IPSTELAKQVI 11 173 599.8559041663787 1197.6972553995572 2 599.8561279177666 MULTI CID FTMS 0 0 0 13462 583794.6875 0.7389015242276677 -2 0.1597518920898437 8 Unmodified _IPSTELAKQVI_ ENSG00000099341|ENST00000215071|PSMD8 125.18120922955336 0.0506983849239639 3 {I|L}PSTE{I|L}AKQV{I|L} 11 0 + 103.94 0.0 0.0 8.6782 8.6782 92.187 0.0 0.0 0.0 27.298435903271937 12.838096733120269 12.838096733120269 7.654182602175396 0 3.142159058960253 2.0 0.3807196863200844 0.9049471895720984 + + {I|L}PSTE{I|L}AKQV{I|L};{I|L}PMW{I|L}AKQV{I|L};{I|L}PSTE{I|L}AK[AG]V{I|L};{I|L}PSTE{I|L}AKQ{I|L}V;[PS]TE{I|L}A{I|L}KN{I|L}{I|L};[VG]EE{I|L}A{I|L}KN{I|L}{I|L};{I|L}PM{I|L}WAKQV{I|L};[{I|L}P]STEA{I|L}KN{I|L}{I|L};[PS]TE{I|L}AKQV{I|L}{I|L};[PS]TE{I|L}A{I|L}KQV{I|L} 8.6782;8.0391;7.916;7.6063;7.5837;7.5466;7.4997;7.4705;7.375;7.3548 +;-;-;-;-;-;-;-;-;- + 26987 + 1 1.175 139300.6 1.0 7989 5479 13462 HBL1_DMSO_200M_050219_1,13470 HBL1_DMSO_200M_050219_1,13470,IPSTELAKQVI True True IPSTELAKQVI 67.784745 599.856127917767 18391998.0 13462.0 ENSG00000099341|ENST00000215071|PSMD8 5.97048020362854 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13471 67.791 337.0 233570.0 25 0 21470.0 -1 VILLIFLCL 9 140 552.3485027807335 0 552.3486816287041 PEAK CID FTMS 0 0 0 13462 481287.9375 0.1508259478839886 4 -0.3162384033203125 9 Carbamidomethyl (C) _VILLIFLC(Carbamidomethyl (C))L_ ENSG00000153786|ENST00000313732|ZDHHC7;ENST00000564526.1_1_16:85009951-85010841:-|nuORF;nc|ENSG00000153786|Q9NXF8-2|ZDHHC7 9.347437153973935 0.3197567915069932 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.63388 0.0 0.0 404.3133863214294 548.3150873973677 952.6284737187972 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.63388 + + 36 + 1 1.175 65260.2 1.0 7990 5479 13462 HBL1_DMSO_200M_050219_1,13471 HBL1_DMSO_200M_050219_1,13471,VILLIFLCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13472 67.798 379.0 192900.0 25 0 19031.0 -1 0 76 975.4161513047428 1948.8177496762853 2 975.4159423708916 MULTI CID FTMS 0 0 0 13462 450645.8125 0.5427764087295494 2 -0.1755523681640625 10 3 [YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]} 14 -1 + 55.331 0.0 0.0 2.8392 2.8392 71.547 0.0 0.0 0.0 5.699849938126889 2.0065945054641787 2.0065945054641787 3.0102999566398125 0 0.0 1.0457574905606752 0.4247425010840047 1.0994850021680094 [YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YDQ{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]};{[RE]|[WV]}[YQ]{I|L}ENYC(Carbamidomethyl (C))C(Carbamidomethyl (C))E{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[RE]|[WV]}[YQ]{I|L}QDYC(Carbamidomethyl (C))C(Carbamidomethyl (C))E{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[Q{I|L}]YEC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]};[Q{I|L}]YEC(Carbamidomethyl (C))C(Carbamidomethyl (C))YDQ{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YDQ{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]};{[SA]|[TG]}V{M(Oxidation (M))|F}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]};{[SA]|[TG]}V{M(Oxidation (M))|F}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YDQ{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]} 2.8392;2.6847;2.5467;2.3923;2.0648;1.9103;1.8392;1.6847;1.5273;1.3728 -;-;-;-;-;-;-;-;-;- 1012 1 1.175 54476.0 1.0 7991 5479 13462 HBL1_DMSO_200M_050219_1,13472 HBL1_DMSO_200M_050219_1,13472, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13473 67.804 365.0 363450.0 25 0 16651.0 -1 KYYLCFYLFVL 11 120 764.8963870813864 1527.7782212295726 2 764.8970825076103 MULTI CID FTMS 0 0 0 13462 437922.5 0.994912383086336 -2 0.1597518920898437 11 Carbamidomethyl (C) _KYYLC(Carbamidomethyl (C))FYLFVL_ MER57F_dup142|chr6:29552528-29552933:-|5.889111264267852|0.0722232426967899|6.35|48.0|19|3|sense 9.38312468134398 0.8308777417566128 3 {[SA]|[TG]}NV[WR]PSQSANV{I|L} 14 -1 + 113.45 0.0 0.0 7.4261 7.4261 80.893 0.0 0.0 0.0 7.891466346851075 16.667853209646182 7.891466346851075 0.5503103999265591 0 0.6237125054200234 0.8860566476931632 2.721848749616356 1.0994850021680094 {[SA]|[TG]}NV[WR]PSQSANV{I|L};{[SA]|[TG]}GGV[WR]PSQSANV{I|L};{[NV]|[RG]}AS[WR]PSQSANV{I|L};{[QG]|[NA]}SV[WR]PSQSANV{I|L};{[SA]|[TG]}NV[WR]PS[AG]SANV{I|L};{[SA]|[TG]}NV[WR]PSQSAGGV{I|L};{[QS]|[NT]}GV[WR]PSQSANV{I|L};{[SA]|[TG]}GGV[WR]PSQSAGGV{I|L};{[SA]|[TG]}GGV[WR]PS[AG]SANV{I|L};{[NV]|[RG]}A[WK]DPSQSANV{I|L} 7.4261;7.39;6.9095;6.9095;6.8337;6.8337;6.8297;6.7989;6.7989;6.7384 -;-;-;-;-;-;-;-;-;- 3532 1 1.175 96346.9 1.0 7992 5479 13462 HBL1_DMSO_200M_050219_1,13473 HBL1_DMSO_200M_050219_1,13473,KYYLCFYLFVL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 13474 67.812 412.0 244260.0 25 0 16858.0 + -1 WDMRWWQFCRW 11 138 586.2603658295932 1755.7592680889793 3 586.2609130740166 MULTI CID FTMS 0 0 0 13462 314561.03125 0.8520183050207609 2 -0.1755523681640625 12 Carbamidomethyl (C) _WDMRWWQFC(Carbamidomethyl (C))RW_ REV__ENST00000430334.7_1_17:43555485-43568071:-|nuORF;REV__ENST00000582986.5_1_17:62801160-62833227:-|nuORF 0.0833504608790944 0.8747546825782322 3 Q 1 -1 17.232 0.0 0.0 0.98145 0.0 0.0 1609.6898386229625 0.0 1609.6898386229625 0.0 4.757724967479859 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 Q 0.98145 + + 1274 + 1 1.175 81131.6 1.0 7993 5479 13462 HBL1_DMSO_200M_050219_1,13474 HBL1_DMSO_200M_050219_1,13474,WDMRWWQFCRW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13475 67.819 412.0 474060.0 25 0 45428.0 -1 CRCRRCRCRRH 11 142 578.2734060292406 1731.7983886879215 3 578.2731201052666 MULTI CID FTMS 0 0 0 13462 304453.0625 0.4194040616832543 2 -0.1755523681640625 13 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))RC(Carbamidomethyl (C))RRC(Carbamidomethyl (C))RC(Carbamidomethyl (C))RRH_ ENST00000569981.2_1_16:29820228-29821657:-|nuORF 0.0 0.8751479354844584 3 [HV]VE[HN]{M(Oxidation (M))|F}W[RH]WW 12 -1 + 46.193 0.0 0.0 2.6674 2.6674 76.57 0.0 0.0 0.0 22.61562369988227 0.4968123769230459 0.4968123769230459 7.7815125038364386 0 0.4247425010840047 1.6989700043360187 0.2614393726401688 0.0 [HV]VE[HN]{M(Oxidation (M))|F}W[RH]WW;[HV]{I|L}D[HN]{M(Oxidation (M))|F}W[RH]WW;VVHE[HN]{M(Oxidation (M))|F}W[RH]WW;[H{I|L}]VD[HN]{M(Oxidation (M))|F}W[RH]WW;VVEH[HN]{M(Oxidation (M))|F}W[RH]WW;{NN|[MP]|[D{I|L}]|[EV]}VH[HN]{M(Oxidation (M))|F}W[RH]WW 2.6674;2.218;1.3582;1.33;0.90889;0.88622 -;-;-;-;-;- 4031 1 1.175 155042.8 1.0 7994 5479 13462 HBL1_DMSO_200M_050219_1,13475 HBL1_DMSO_200M_050219_1,13475,CRCRRCRCRRH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13476 67.828 424.0 275810.0 25 0 27248.0 -1 ILNMCNIDVT 10 142 604.7856039046939 1207.5566548761876 2 604.7864868044853 MULTI CID FTMS 0 0 0 13462 306053.25 0.080823444967358 5 -0.3974151611328125 14 Carbamidomethyl (C),Oxidation (M) _ILNM(Oxidation (M))C(Carbamidomethyl (C))NIDVT_ ENSG00000105929|ENST00000310018|ATP6V0A4 14.838274106304384 0.5985701837916485 3 YY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A{[QS]|[NT]}{I|L}{[VA]|[{I|L}G]} 10 -1 + 33.19 0.0 0.0 2.7485 2.7485 81.472 0.0 0.0 0.0 7.476884018817252 8.128552861292285 7.476884018817252 21.7659970366416 0 0.5 2.0 0.3807196863200844 0.0 YY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A{[QS]|[NT]}{I|L}{[VA]|[{I|L}G]};{[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}][WC(Carbamidomethyl (C))]{I|L}{[VA]|[{I|L}G]};{[YD]|[{M(Oxidation (M))|F}M]}A[DN]{I|L}{[QS]|[NT]}{I|L}{[VA]|[{I|L}G]};{[YD]|[{M(Oxidation (M))|F}M]}A[DN]{[QS]|[NT]}{I|L}{I|L}{[VA]|[{I|L}G]};{[C(Carbamidomethyl (C))E]|[WC]}[WK]M{[RE]|[WV]}AV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R{[WN]|[YH]}[R{M(Oxidation (M))|F}]AV;{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}T]DDW{I|L}{[VA]|[{I|L}G]};{[C(Carbamidomethyl (C))E]|[WC]}[WK]M{[RE]|[WV]}G{I|L};{[C(Carbamidomethyl (C))E]|[WC]}[WQ]{I|L}[R{M(Oxidation (M))|F}]AV;{[QS]|[NT]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DDW{I|L}{[VA]|[{I|L}G]} 2.7485;0.94606;0.88899;0.88899;0.88272;0.71145;0.65644;0.61589;0.52774;0.49027 -;-;-;-;-;-;-;-;-;- 866 1 1.175 85140.5 1.0 7995 5479 13462 HBL1_DMSO_200M_050219_1,13476 HBL1_DMSO_200M_050219_1,13476,ILNMCNIDVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13477 67.837 532.0 401350.0 25 0 27424.0 -1 VSTSSMGTL 9 197 449.7133270374624 897.4121011417249 2 449.7137634158134 MULTI CID FTMS 0 0 0 13462 276703.84375 1.0 0 0.0 15 Oxidation (M) _VSTSSM(Oxidation (M))GTL_ ENSG00000117305|ENST00000374490|HMGCL;ENST00000509389.5_1_1:24130838-24151905:-|nuORF;ENST00000513148.1_1_1:24137168-24151905:-|nuORF;nc|ENSG00000117305|P35914-2|HMGCL;nc|ENSG00000117305|P35914-3|HMGCL 23.1484247019978 0.2366544122328345 3 VS 2 -1 44.949 0.0 0.0 5.0087 0.0 0.0 0.0 708.290018092818 708.290018092818 10.0 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.4247425010840047 0.0 VS 5.0087 + + 723 + 1 1.175 164089.0 1.0 7996 5479 13462 HBL1_DMSO_200M_050219_1,13477 HBL1_DMSO_200M_050219_1,13477,VSTSSMGTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13478 67.846 501.0 343490.0 25 0 35476.0 -1 0 132 910.9174072146416 0 910.9174072146416 PEAK CID FTMS 0 0 0 -1 0 16 3 PN{I|L}DADQ 7 -1 34.941 0.0 0.0 1.92 0.0 0.0 245.08140985293272 818.3817843072874 1063.4631941602202 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.25 PN{I|L}DADQ 1.92 - 1306 + 1 1.175 116836.0 1.0 7997 5479 13462 HBL1_DMSO_200M_050219_1,13478 HBL1_DMSO_200M_050219_1,13478, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13479 67.857 633.0 527620.0 25 0 95916.0 34299 SLRGSCTA 8 214 397.6931174835275 793.371682033855 2 397.6931030154228 MULTI CID FTMS 0 0 0 13462 226289.140625 0.5599108024608308 -1 0.0339889526367187 17 Unmodified _SLRGSCTA_ ENST00000596085.1_1_19:58196645-58196720:+|nuORF 5.760428011301431 0.7893668129297577 3 {[TV]|[{I|L}S]}KY{[{M(Oxidation (M))|F}H]|[RQ]} 6 6 + 24.754 0.0 0.0 3.1201 3.1201 71.102 0.0 0.0 0.0 7.318941346984928 1.7609125905568137 1.7609125905568137 2.430380486862944 0 0.0 1.154901959985743 0.6549471895720985 0.0 {[TV]|[{I|L}S]}KY{[{M(Oxidation (M))|F}H]|[RQ]};{[TV]|[{I|L}S]}KH[Y{M(Oxidation (M))|F}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CP]|[EA]}EV{I|L};[KS]{I|L}Y{[{M(Oxidation (M))|F}H]|[RQ]};[KS]{I|L}H[Y{M(Oxidation (M))|F}];[MT]CEVV{I|L};[MT]CD{I|L}V{I|L};[MT]CVEV{I|L};[Y{I|L}][KS]{[{M(Oxidation (M))|F}H]|[RQ]};{[MS]|[{M(Oxidation (M))|F}A]}{[ES]|[DT]|[{I|L}C]}EV{I|L} 3.1201;2.8138;1.6496;1.3248;1.0185;0.81764;0.81764;0.81764;0.49478;0.022216 -;-;-;-;-;-;-;-;-;- 432 1 1.175 259512.8 1.0 7998 5479 13462 HBL1_DMSO_200M_050219_1,13479 HBL1_DMSO_200M_050219_1,13479,SLRGSCTA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13480 67.86 100.0 856440.0 25 0 111310.0 + 41874 VPYRVVGL 8 106 451.7762988942191 901.5380448552382 2 451.7768737673759 MULTI CID FTMS 0 0 0 13462 202690.453125 0.1469457811950745 -3 0.255157470703125 18 Unmodified _VPYRVVGL_ ENSG00000176624|ENST00000406189|MEX3C;ENSG00000181588|ENST00000402693|MEX3D;ENSG00000183496|ENST00000329713|MEX3B;ENSG00000254726|ENST00000532414|MEX3A;ENST00000558133.1_1_15:82335503-82336997:-|nuORF;nc|ENSG00000181588|Q86XN8-2|MEX3D;nc|ENSG00000181588|Q86XN8-3|MEX3D 46.92087301778293 0.1537303740847981 3 VPYRVVG{I|L} 8 0 + 62.759 0.0 0.0 6.9613 6.9613 88.339 0.0 0.0 0.0 28.62826806974688 6.989700043360188 6.989700043360188 6.989700043360188 0 1.1435078169319297 1.2218487496163564 0.0 0.0 + + VPYRVVG{I|L};VPYRVVAV;VPYRV{I|L}GV 6.9613;6.186;4.7936 +;-;- + 216 + 1 1.175 70667.8 1.0 7999 5479 13462 HBL1_DMSO_200M_050219_1,13480 HBL1_DMSO_200M_050219_1,13480,VPYRVVGL False True VPYRVVGL 67.860361 451.776873767376 22916660.0 13462.0 ENSG00000183496|ENST00000329713|MEX3B;;ENSG00000176624|ENST00000406189|MEX3C;;nc|ENSG00000181588|Q86XN8-3|MEX3D;;nc|ENSG00000181588|Q86XN8-2|MEX3D;;ENST00000558133.1_1_15:82335503-82336997:-|nuORF;;ENSG00000254726|ENST00000532414|MEX3A;;ENSG00000181588|ENST00000402693|MEX3D 6.466349442799886 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13481 67.862 98.0 993940.0 25 0 110170.0 + 24419 MGAPALKI 8 103 400.7381234544866 799.4616939757732 2 400.7386352419853 MULTI CID FTMS 0 0 0 13462 165020.234375 0.0735706898100593 -3 0.255157470703125 19 Unmodified _MGAPALKI_ ENSG00000197892|ENST00000524189|KIF13B;nc|ENSG00000197892|Q9NQT8-2|KIF13B 38.15118350030904 0.2652218139009398 3 MQPA{I|L}K{I|L} 7 2 + 43.137 0.0 0.0 5.3958 5.3958 80.866 0.0 0.0 0.0 16.320232147054057 4.586378490256493 4.586378490256493 4.586378490256493 0 0.4247425010840047 0.0 0.0 0.2215141619232908 MQPA{I|L}K{I|L};MQPA{I|L}{I|L}K;MQ{I|L}[PA]K{I|L};M[AG]PA{I|L}K{I|L};MQ{I|L}[PA]{I|L}K;M[AG]PA{I|L}{I|L}K;M[AG]{I|L}[PA]K{I|L};M[AG]{I|L}[PA]{I|L}K 5.3958;4.8221;4.3012;4.2287;3.7276;3.655;3.1341;2.5605 -;-;-;+;-;-;-;- + 150 + 1 1.175 79613.9 1.0 8000 5479 13462 HBL1_DMSO_200M_050219_1,13481 HBL1_DMSO_200M_050219_1,13481,MGAPALKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13482 67.876 781.0 243370.0 25 0 11846.0 + 7507 EHFIRADI 8 237 334.17804889111017 999.5123172735304 3 334.1783935427666 MULTI CID FTMS 0 0 0 13462 141522.28125 1.0 0 0.0 20 Unmodified _EHFIRADI_ REV__ENSG00000100714|ENST00000652337|MTHFD1;REV__ENST00000555252.5_1_14:64855058-64907131:+|nuORF 12.240655878213236 0.7300809844188293 3 DA 2 -1 31.427 0.0 0.0 3.1442 0.0 0.0 0.0 810.4288131867593 810.4288131867593 18.317562352075782 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 DA 3.1442 - 291 + 1 1.175 154200.8 1.0 8001 5479 13462 HBL1_DMSO_200M_050219_1,13482 HBL1_DMSO_200M_050219_1,13482,EHFIRADI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13484 67.88 0.9 50821000.0 25 0 4514600.0 + 8679 EVISKLYAV 9 76 511.3000831317905 1020.585613330381 2 511.3008605837822 MULTI CID FTMS 0 0 0 13483 29803752.0 0.4401714526676762 1 -0.0572128295898437 1 Unmodified _EVISKLYAV_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 39.957323273325 0.0756908302845263 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}S[K{I|L}]YAV 9 0 + 53.069 0.0 0.0 5.1998 5.1998 89.253 0.0 0.0 0.0 23.639305113795643 4.248125503345378 4.248125503345378 53.06864994446123 0 0.3494850021680094 2.0 0.3252574989159953 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}{I|L}S[K{I|L}]YAV 5.1998 + + 314 + 1 1.175 38592.7 1.0 8002 5480 13483 HBL1_DMSO_200M_050219_1,13484 HBL1_DMSO_200M_050219_1,13484,EVISKLYAV True True EVISKLYAV 67.880077 511.300860583782 425715392.0 13483.0 nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 6.31151294708252 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13485 67.881 2.3 16037000.0 25 0 1960400.0 + 37497 TLGDVFRSL 9 56 504.27971494636216 1006.5448769595243 2 504.2805358767509 MULTI CID FTMS 0 0 0 13483 11512419.0 0.2212238112400819 6 -0.4141845703125 2 Unmodified _TLGDVFRSL_ REV__ENSG00000155363|ENST00000369645|MOV10;REV__ENST00000468624.5_1_1:113217534-113241292:+|nuORF;REV__ENST00000496577.5_1_1:113231344-113241292:+|nuORF;REV__nc|ENSG00000155363|Q9HCE1-2|MOV10 24.020572477871973 0.2255576514309169 3 [{I|L}T]G[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 -1 + 56.66 0.0 0.0 5.6292 5.6292 81.937 0.0 0.0 0.0 4.771212547196626 16.478174818886373 4.771212547196626 4.771212547196626 0 0.5 1.6989700043360187 0.4247425010840047 0.0 [{I|L}T]G[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 5.6292;5.1551;4.1827 -;-;- 79 1 1.175 33775.5 1.0 8003 5480 13483 HBL1_DMSO_200M_050219_1,13485 HBL1_DMSO_200M_050219_1,13485,TLGDVFRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13486 67.882 1.3 15289000.0 25 0 1987600.0 + 43598 YAFNMKATV 9 47 522.7625554766594 1043.5105580201189 2 522.7629272341728 MULTI CID FTMS 0 0 0 13483 21695882.0 0.3544854945759634 -4 0.3734970092773437 3 Unmodified _YAFNMKATV_ ENSG00000109971|ENST00000534624|HSPA8 17.11289562659939 0.3734572693229295 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM 5 4 43.456 0.0 0.0 4.1644 0.0 0.0 0.0 414.23533044986567 414.23533044986567 31.237125054200234 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM 4.1644 + + 26 + 1 1.175 26315.0 1.0 8004 5480 13483 HBL1_DMSO_200M_050219_1,13486 HBL1_DMSO_200M_050219_1,13486,YAFNMKATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13487 67.884 2.4 13093000.0 25 0 1878700.0 22453 LPVAQVIF 8 60 443.7734746181057 885.5323963030114 2 443.7734863162041 MULTI CID FTMS 0 0 0 13483 12731879.0 0.4170026487059923 -6 0.5193099975585938 4 Unmodified _LPVAQVIF_ ENST00000254322.2_1_19:14625909-14626227:-|nuORF 19.438996006549623 0.6237395211498085 3 {I|L}P 2 6 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3742376611101 672.3742376611101 24.141434418070347 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 67 + 1 1.175 33437.5 1.0 8005 5480 13483 HBL1_DMSO_200M_050219_1,13487 HBL1_DMSO_200M_050219_1,13487,LPVAQVIF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13488 67.885 2.5 9637500.0 25 0 1539800.0 + 9054 FEMWDWESL 9 49 621.7598359144569 1241.5051188957136 2 621.7603637576103 MULTI CID FTMS 0 0 0 13483 12588484.0 1.0 0 0.0 5 Unmodified _FEMWDWESL_ REV__ENSG00000134070|ENST00000256458|IRAK2 4.3292370932331545 0.7635526921153418 3 S{I|L} 2 -1 20.969 0.0 0.0 1.689 0.0 0.0 1023.3779959482512 0.0 1023.3779959482512 0.0 9.542425094393252 0.0 0.0 0 0.0 0.0 0.0 0.0 S{I|L} 1.689 + + 27 + 1 1.175 25482.1 1.0 8006 5480 13483 HBL1_DMSO_200M_050219_1,13488 HBL1_DMSO_200M_050219_1,13488,FEMWDWESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13489 67.886 4.4 5754400.0 25 0 290920.0 -1 RCHRRRRRCCC 11 43 866.9067123982009 1731.7988718632016 2 867.4078857302666 MULTI CID FTMS 0 0 0 13483 6113244.5 0.3397118871621494 3 -0.1978988647460937 6 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 3 [MN][NP]{I|L}NADQ 9 -1 47.91 0.0 0.0 2.7665 0.0 0.0 0.0 731.3433321588499 731.3433321588499 30.563565498376448 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 [MN][NP]{I|L}NADQ 2.7665 - 163 + 1 1.175 24926.4 1.0 8007 5480 13483 HBL1_DMSO_200M_050219_1,13489 HBL1_DMSO_200M_050219_1,13489,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13490 67.887 4.6 3145900.0 25 0 688240.0 + 45969 YYYNGVDGDYY 11 32 696.2747492111519 1390.5349454891036 2 696.2749511599541 MULTI CID FTMS 0 0 0 13483 2708642.5 0.4187155623215702 1 -0.0572128295898437 7 Unmodified _YYYNGVDGDYY_ REV__ENSG00000116478|ENST00000373548|HDAC1;REV__ENST00000463172.5_1_1:32757770-32792715:+|nuORF;REV__ENST00000481281.5_1_1:32757770-32793222:+|nuORF 6.723162845929126 0.8434276150410019 3 YY 2 -1 15.573 0.0 0.0 1.1199 0.0 0.0 1046.396561555313 0.0 1046.396561555313 0.0 8.58349385648225 0.0 0.0 0 0.0 0.0 0.0 0.0 YY 1.1199 + + 8 + 1 1.175 20192.0 1.0 8008 5480 13483 HBL1_DMSO_200M_050219_1,13490 HBL1_DMSO_200M_050219_1,13490,YYYNGVDGDYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13491 67.888 9.3 2376200.0 25 0 217150.0 + 40854 VLPERNFL 8 48 494.283846618593 986.553140303986 2 494.2830688357353 MULTI CID FTMS 0 0 0 13483 2070503.0 0.3589308781260247 6 -0.4141845703125 8 Unmodified _VLPERNFL_ REV__ENST00000309993.2_1_3:135913954-135914020:-|nuORF 3.944395688203298 0.8003900995685364 3 [{I|L}V]PE 4 -1 16.198 0.0 0.0 1.6419 0.0 0.0 0.0 545.2840059869749 545.2840059869749 14.604093769761874 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [{I|L}V]PE 1.6419 + + 7 + 1 1.175 23345.8 1.0 8009 5480 13483 HBL1_DMSO_200M_050219_1,13491 HBL1_DMSO_200M_050219_1,13491,VLPERNFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13492 67.89 16.0 2665000.0 25 0 678850.0 33356 SGHGNAIP 8 67 376.687578385724 751.3606038382479 2 376.6876098513603 MULTI CID FTMS 0 0 0 13483 1991947.375 0.601469479788378 1 -0.0572128295898437 9 Unmodified _SGHGNAIP_ ENSG00000142303|ENST00000597188|ADAMTS10;ENST00000601163.1_1_19:8661189-8662174:-|nuORF;nc|ENSG00000142303|Q9H324|ADAMTS10 2.889219685676258 0.8067950007271085 3 {[TV]|[{I|L}S]}{I|L} 3 6 32.051 0.0 0.0 4.2658 0.0 0.0 0.0 435.1380445943605 435.1380445943605 15.395906230238126 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3494850021680094 0.0 {[TV]|[{I|L}S]}{I|L} 4.2658 - 50 1 1.175 40649.9 1.0 8010 5480 13483 HBL1_DMSO_200M_050219_1,13492 HBL1_DMSO_200M_050219_1,13492,SGHGNAIP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13493 67.891 19.0 3228400.0 25 0 612610.0 + 39201 TYSEFAREL 9 72 558.2720067651649 0 558.2720214724541 PEAK CID FTMS 0 0 0 13483 1312946.75 0.183986377169013 -4 0.3734970092773437 10 Unmodified _TYSEFAREL_ nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1 34.93206674587334 0.0866320009191956 3 YSE{M(Oxidation (M))|F}KP 6 5 43.747 0.0 0.0 3.9252 0.0 0.0 101.0459711153772 259.10822473697505 360.15419585235225 0.0 0.0 0.0 0.0 0 0.6307196863200843 0.0 0.3807196863200844 0.4247425010840047 YSE{M(Oxidation (M))|F}KP 3.9252 - 80 + 1 1.175 53791.8 1.0 8011 5480 13483 HBL1_DMSO_200M_050219_1,13493 HBL1_DMSO_200M_050219_1,13493,TYSEFAREL True True TYSEFAREL 67.8907 558.272021472454 293369504.0 13483.0 nc|ENSG00000198901|O43663-2|PRC1;;nc|ENSG00000198901|O43663-4|PRC1 6.85602601369222 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13494 67.892 19.0 1085300.0 25 0 112040.0 + 27928 PLTPNMDKFGG 11 56 392.863093441669 1175.5674509252071 3 392.8631164431572 MULTI CID FTMS 0 0 0 13483 1291142.625 0.7456261383835502 -1 0.1183395385742187 11 Unmodified _PLTPNMDKFGG_ REV__ENSG00000125355|ENST00000371369|TMEM255A;REV__nc|ENSG00000125355|Q5JRV8-2|TMEM255A;REV__nc|ENSG00000125355|Q5JRV8|TMEM255A 4.897010918128616 0.8520435188433833 3 [{I|L}P]G 3 -1 17.28 0.0 0.0 1.4699 0.0 0.0 0.0 905.3853274723352 905.3853274723352 3.863781092484686 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}P]G 1.4699 - 20 1 1.175 24144.9 1.0 8012 5480 13483 HBL1_DMSO_200M_050219_1,13494 HBL1_DMSO_200M_050219_1,13494,PLTPNMDKFGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13495 67.893 13.0 2643200.0 25 0 463020.0 + 45096 YPYPYPHTL 9 57 575.7823890577012 1149.5502251822022 2 575.7791015505791 MULTI CID FTMS 0 0 0 13483 1342737.0 0.2149046607914554 6 -0.4141845703125 12 Unmodified _YPYPYPHTL_ ENSG00000116221|ENST00000360840|MRPL37 57.47134341890925 0.0274820932774257 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPHT{I|L} 9 0 + 77.184 0.0 0.0 6.7143 6.7143 94.62 0.0 0.0 0.0 59.4812969097282 20.898255349109505 20.898255349109505 77.18433447093204 0 0.805462187404089 2.0 0.8494850021680094 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPHT{I|L} 6.7143 + + 53 + 1 1.175 33013.5 1.0 8013 5480 13483 HBL1_DMSO_200M_050219_1,13495 HBL1_DMSO_200M_050219_1,13495,YPYPYPHTL True True YPYPYPHTL 67.893057 575.779101550579 213981192.0 13483.0 ENSG00000116221|ENST00000360840|MRPL37 8.775638580322266 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13496 67.895 90.0 538990.0 25 0 45037.0 + 3331 AYMELQQKAEF 11 90 679.3264514065403 1356.6383498798805 2 679.3270141482353 MULTI CID FTMS 0 0 0 13483 427752.34375 0.1832564476248231 -4 0.3734970092773437 13 Unmodified _AYMELQQKAEF_ ENSG00000117724|ENST00000366955|CENPF 49.74193281347159 0.1190592179673825 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ME{I|L}QQ 7 4 64.697 0.0 0.0 4.7689 0.0 0.0 0.0 490.2319427210259 490.2319427210259 35.712344731276524 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.0 0.4247425010840047 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ME{I|L}QQ 4.7689 + + 1000 + 1 1.175 42111.7 1.0 8014 5480 13483 HBL1_DMSO_200M_050219_1,13496 HBL1_DMSO_200M_050219_1,13496,AYMELQQKAEF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13497 67.901 298.0 821420.0 25 0 28865.0 -1 0 156 873.9143878058196 1745.8142226784391 2 873.9147827029228 MULTI CID FTMS 0 0 0 13483 417046.5 0.0329403157226027 -4 0.3734970092773437 14 3 NMPN{I|L}NEAQRGD{M(Oxidation (M))|F}{I|L}Q 15 -1 + 144.18 0.0 0.0 8.2588 8.2588 88.577 0.0 0.0 0.0 24.25968732272281 14.48204003106477 14.48204003106477 4.498103176992174 0 3.190614065464281 1.5228787452803376 0.6747425010840047 2.374803706770636 NMPN{I|L}NEAQRGD{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NEAQ[{M(Oxidation (M))|F}T]{I|L}N{I|L}Q;NMPN{I|L}NEAQ[VG]GD{M(Oxidation (M))|F}{I|L}Q;NMPGG{I|L}NEAQRGD{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NEA[AG]RGD{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}GGEAQRGD{M(Oxidation (M))|F}{I|L}Q;NMPN{I|L}NEAQ[{M(Oxidation (M))|F}T]{I|L}QVQ;NMPGG{I|L}NEAQ[{M(Oxidation (M))|F}T]{I|L}N{I|L}Q;NMPN{I|L}NEA[AG][{M(Oxidation (M))|F}T]{I|L}N{I|L}Q;NMPN{I|L}GGEAQ[{M(Oxidation (M))|F}T]{I|L}N{I|L}Q 8.2588;8.0011;7.7415;7.7415;7.7415;7.7415;7.6433;7.4838;7.4838;7.4838 -;-;-;-;-;-;-;-;-;- 89672 + 1 1.175 161316.6 1.0 8015 5480 13483 HBL1_DMSO_200M_050219_1,13497 HBL1_DMSO_200M_050219_1,13497, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13498 67.906 289.0 262570.0 25 0 15742.0 + -1 QHCYPCCSL 9 125 633.7389123163265 0 633.7390014529228 PEAK CID FTMS 0 0 0 13483 393100.90625 1.0 0 0.0 15 Acetyl (Protein N-term),3 Carbamidomethyl (C) _(Acetyl (Protein N-term))QHC(Carbamidomethyl (C))YPC(Carbamidomethyl (C))C(Carbamidomethyl (C))SL_ REV__ENST00000295324.3_1_2:37873351-37873417:-|nuORF 4.75600775471527 0.3444685223463735 3 S 1 -1 9.2917 0.0 0.0 0.73426 0.0 0.0 1047.3362708223028 128.07209192447502 1175.4083627467778 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 S 0.73426 + + 71 + 1 1.175 67512.1 1.0 8016 5480 13483 HBL1_DMSO_200M_050219_1,13498 HBL1_DMSO_200M_050219_1,13498,QHCYPCCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13499 67.911 299.0 450200.0 25 0 72353.0 -1 SLQPQDVMCSI 11 148 647.2938980861571 1292.5732432391142 2 647.7960082888603 MULTI CID FTMS 0 0 0 13483 350364.0 0.5257346565956778 -2 0.1523284912109375 16 Carbamidomethyl (C),Oxidation (M) _SLQPQDVM(Oxidation (M))C(Carbamidomethyl (C))SI_ ENSG00000137962|ENST00000260526|ARHGAP29;ENST00000482481.1_1_1:94643162-94655618:-|nuORF 20.41453444215458 0.6105011870913812 3 {[QS]|[NT]}{I|L}S 4 -1 38.874 0.0 0.0 3.0075 0.0 0.0 0.0 874.3437900678263 874.3437900678263 10.582216988711842 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.91944517631652 0.6747425010840047 {[QS]|[NT]}{I|L}S 3.0075 - 1739 1 1.175 100954.5 1.0 8017 5480 13483 HBL1_DMSO_200M_050219_1,13499 HBL1_DMSO_200M_050219_1,13499,SLQPQDVMCSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13500 67.917 323.0 470560.0 25 0 38000.0 + 8841 EYVSGKIETL 10 166 569.8035269246687 0 569.8053466677666 PEAK CID FTMS 0 0 0 13483 278703.15625 0.1839914595458971 -2 0.1523284912109375 17 Unmodified _EYVSGKIETL_ REV__ENSG00000153975|ENST00000368576|ZUP1;REV__ENST00000471919.1_1_6:116981518-116989864:-|nuORF 57.72198328787511 0.0272708386103146 3 TE{I|L}KT 5 -1 41.612 0.0 0.0 3.6579 0.0 0.0 131.0923310936749 431.1561068170532 562.2484379107281 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.9802046884880933 0.0 TE{I|L}KT 3.6579 - 1217 + 1 1.175 118303.0 1.0 8018 5480 13483 HBL1_DMSO_200M_050219_1,13500 HBL1_DMSO_200M_050219_1,13500,EYVSGKIETL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13501 67.923 327.0 263630.0 25 0 17104.0 + 35089 SQVEQQQLITV 11 133 636.8418177627452 1271.6690825922904 2 636.8407470583916 MULTI CID FTMS 0 0 0 13483 260848.8125 0.3237696371957586 -4 0.3734970092773437 18 Unmodified _SQVEQQQLITV_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF 32.89776655970281 0.3218023389984559 3 {[TV]|[{I|L}S]}NEQQQ{I|L} 8 5 44.417 0.0 0.0 3.4928 0.0 0.0 0.0 328.184599211656 328.184599211656 17.901763648293354 0.0 0.0 0.0 0 0.0 1.154901959985743 0.4489700043360188 0.3252574989159953 {[TV]|[{I|L}S]}NEQQQ{I|L} 3.4928 - 1683 1 1.175 69813.7 1.0 8019 5480 13483 HBL1_DMSO_200M_050219_1,13501 HBL1_DMSO_200M_050219_1,13501,SQVEQQQLITV False True SQVEQQQLITV 67.923173 636.840747058392 6723559.5 13483.0 ENSG00000156802|ENST00000287394|ATAD2;;ENST00000517666.5_1_8:124333376-124408650:-|nuORF 5.082826137542725 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13502 67.933 568.0 273060.0 25 0 33515.0 + 35726 SVHKENFLL 9 184 362.8693962625623 1085.586359387887 3 362.8689453005791 MULTI CID FTMS 0 0 0 13483 207102.90625 1.0 0 0.0 19 Unmodified _SVHKENFLL_ ENSG00000130529|ENST00000252826|TRPM4;nc|ENSG00000130529|Q8TD43-2|TRPM4;nc|ENSG00000130529|Q8TD43-3|TRPM4 19.256988751693697 0.3154191944385105 3 [VS][QP]{I|L}S{[ET]|[MV]}{I|L}{I|L} 10 6 [VS][QP]{I|L}S{[ET]|[MV]}{I|L} + + 14.604 11.66 1.2216 1.3453 1.3453 48.475 0.0 0.0 0.0 0.0 -12.082754460870545 -12.082754460870545 0.0 0 0.0 0.0 0.0 0.0 [VS][QP]{I|L}S{[ET]|[MV]}{I|L}{I|L} 1.3453 - 393 + 1 1.175 123237.9 1.0 8020 5480 13483 HBL1_DMSO_200M_050219_1,13502 HBL1_DMSO_200M_050219_1,13502,SVHKENFLL False True SVHKENFLL 67.933119 362.868945300579 1700836.625 13483.0 nc|ENSG00000130529|Q8TD43-2|TRPM4;;ENSG00000130529|ENST00000252826|TRPM4;;nc|ENSG00000130529|Q8TD43-3|TRPM4 1.0631330211957295 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13504 67.938 72.0 507190.0 25 0 107360.0 + -1 DTMMDSTQEYY 11 52 708.2534970651393 1414.4924411970785 2 708.2539550662041 MULTI CID FTMS 0 0 0 13503 558085.75 0.2694243418025424 1 -0.1125640869140625 1 2 Oxidation (M) _DTM(Oxidation (M))M(Oxidation (M))DSTQEYY_ REV__ENSG00000078674|ENST00000325083|PCM1;REV__nc|ENSG00000078674|Q15154-2|PCM1;REV__nc|ENSG00000078674|Q15154-4|PCM1;REV__nc|ENSG00000078674|Q15154-5|PCM1 4.897010918128616 0.8520435188433833 3 V[NG]YY 5 -1 30.273 0.0 0.0 2.1402 0.0 0.0 800.2246158855583 0.0 800.2246158855583 0.0 14.78855930516417 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 V[NG]YY 2.1402 - 46 1 1.175 35011.9 1.0 8021 5481 13503 HBL1_DMSO_200M_050219_1,13504 HBL1_DMSO_200M_050219_1,13504,DTMMDSTQEYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13505 67.939 73.0 1235000.0 25 0 81256.0 + 12995 YTFDPVTKV 9 135 534.8022018123282 1067.5898506914564 2 534.8029662966728 MULTI CID FTMS 0 0 0 13503 152559.140625 0.0232781553247325 10 -0.4847335815429687 2 Unmodified _HALRMLQSI_ ENSG00000185009|ENST00000355264|AP3M1 18.1463463914782 0.3454829746528889 3 T{M(Oxidation (M))|F}DPVKS{I|L} 8 7 27.751 0.0 0.0 2.5994 0.0 0.0 162.10244833695384 0.0 162.10244833695384 0.0 -1.2207900908290448 -1.2207900908290448 0.0 0 0.7059771852360797 0.0 0.1344005005252609 0.0 T{M(Oxidation (M))|F}DPVKS{I|L} 2.5994 - 340 + 1 1.175 74486.5 1.0 8022 5481 13503 HBL1_DMSO_200M_050219_1,13505 HBL1_DMSO_200M_050219_1,13505,HALRMLQSI False True YTFDPVTKV 67.939308 534.802966296673 6364938.0 13503.0 ENSG00000185009|ENST00000355264|AP3M1 6.056256612141927 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13506 67.941 70.0 1253800.0 25 0 117260.0 + 25215 MVADRFSEL 9 111 534.2628789365131 1066.511204939826 2 534.2630493044853 MULTI CID FTMS 0 0 0 13503 515568.0 0.0299086846729361 -3 0.2095413208007812 3 Unmodified _MVADRFSEL_ ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 22.736283301280096 0.2418982879461534 3 MVADQ 5 5 57.735 0.0 0.0 5.4135 0.0 0.0 0.0 519.2473238580686 519.2473238580686 36.16962881141027 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3054621874040891 0.0 MVADQ 5.4135 - 465 + 1 1.175 74269.2 1.0 8023 5481 13503 HBL1_DMSO_200M_050219_1,13506 HBL1_DMSO_200M_050219_1,13506,MVADRFSEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13507 67.946 283.0 772620.0 25 0 74011.0 34276 SLQSQTEDTV 10 186 554.2616257128416 1106.508698492483 2 554.2621337771416 MULTI CID FTMS 0 0 0 13503 407284.125 0.0105632341189213 -4 0.3353042602539062 4 Unmodified _SLQSQTEDTV_ ENST00000497953.5_3_3:52738772-52739516:-|nuORF 41.95555342248728 0.1369168616057562 3 {[QS]|[NT]}{I|L}SQP{I|L} 7 7 71.778 0.0 0.0 6.4869 0.0 0.0 0.0 350.0816714751581 350.0816714751581 49.76441370171168 0.0 0.0 0.0 0 2.1861818737241734 0.8538719643217619 1.7104093769761874 1.200061205686631 {[QS]|[NT]}{I|L}SQP{I|L} 6.4869 - 2532 1 1.175 168259.8 1.0 8024 5481 13503 HBL1_DMSO_200M_050219_1,13507 HBL1_DMSO_200M_050219_1,13507,SLQSQTEDTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13508 67.953 402.0 818880.0 25 0 109430.0 + + 20070 LLIGHLERV 9 240 350.5538202355588 1048.6396313068765 3 350.5535461306572 MULTI CID FTMS 0 0 0 13503 366809.5 1.0 0 0.0 5 Unmodified _LIVAVLHER_ ENSG00000155561|ENST00000285968|NUP205 28.23362336080872 0.1719529537093671 3 {I|L}{I|L}{I|L}GH{I|L}ERV 9 -1 + 79.368 0.0 0.0 7.5687 7.5687 85.271 0.0 0.0 0.0 36.47817481888637 7.041096439884299 7.041096439884299 3.0102999566398125 0 0.3468040358200661 2.0 0.0 0.6549471895720985 {I|L}{I|L}{I|L}GH{I|L}ERV;{I|L}{I|L}VAH{I|L}ERV;{I|L}{I|L}{I|L}GH{I|L}[RD]{I|L};{I|L}{I|L}{I|L}GH{I|L}VWV;{I|L}{I|L}{I|L}GHV{I|L}WV;{I|L}{I|L}VAH{I|L}[RD]{I|L};{I|L}{I|L}{I|L}GHVWV{I|L};{I|L}{I|L}VAH{I|L}VWV;{I|L}{I|L}{I|L}GVH{I|L}WV;{I|L}{I|L}VAHV{I|L}WV 7.5687;7.2816;6.8972;6.6571;6.6571;6.6102;6.4406;6.37;6.37;6.37 -;-;-;-;-;-;-;-;-;- 1468 + 1 1.175 263286.4 1.0 8025 5481 13503 HBL1_DMSO_200M_050219_1,13508 HBL1_DMSO_200M_050219_1,13508,LIVAVLHER False False LLIGHLERV 67.953375 350.553546130657 2086738.625 13503.0 ENSG00000155561|ENST00000285968|NUP205 5.711973349253337 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13509 67.959 331.0 327930.0 25 0 25883.0 + 7990 EMCFDNQVSL 10 132 593.2494948097949 1184.4844366863897 2 593.2499267458916 MULTI CID FTMS 0 0 0 13503 261809.78125 1.0 0 0.0 6 Unmodified _EMCFDNQVSL_ ENSG00000166535|ENST00000299698|A2ML1;nc|ENSG00000166535|A8K2U0-2|A2ML1 21.53697664764585 0.484802182336468 3 YGNVS{I|L} 6 6 51.631 0.0 0.0 4.3589 0.0 0.0 533.1609974591812 0.0 533.1609974591812 0.0 41.79805664215991 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.7742275032520141 YGNVS{I|L} 4.3589 - 265 1 1.175 85810.1 1.0 8026 5481 13503 HBL1_DMSO_200M_050219_1,13509 HBL1_DMSO_200M_050219_1,13509,EMCFDNQVSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13510 67.965 335.0 195150.0 25 0 24773.0 + 5301 DLDFAVSRRSG 11 88 611.8132501593362 1221.6119473854724 2 611.8137084841728 MULTI CID FTMS 0 0 0 13503 244154.125 0.8668172950028041 -2 0.1755523681640625 7 Unmodified _DLDFAVSRRSG_ REV__ENSG00000196739|ENST00000356083|COL27A1;REV__nc|ENSG00000196739|Q8IZC6-3|COL27A1 17.11289562659939 0.6791789249425932 3 QV{I|L}A{[WT]|[RM]}D 7 -1 34.059 0.0 0.0 2.7881 0.0 0.0 320.1593783402804 85.03025995426015 405.1896382945405 0.0 0.0 0.0 0.0 0 0.5 0.0 1.2728787452803376 0.0 QV{I|L}A{[WT]|[RM]}D 2.7881 - 299 + 1 1.175 54053.9 1.0 8027 5481 13503 HBL1_DMSO_200M_050219_1,13510 HBL1_DMSO_200M_050219_1,13510,DLDFAVSRRSG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13511 67.972 360.0 258110.0 25 0 18857.0 -1 0 115 648.9885634898543 1943.9438610697628 3 648.9895507693291 MULTI CID FTMS 0 0 0 13503 172812.953125 0.7109037697212609 2 -0.14068603515625 8 3 [QP]S[Y{M(Oxidation (M))|F}]E[VP]ETVS 12 -1 35.263 0.0 0.0 1.814 0.0 0.0 0.0 577.2752138528955 577.2752138528955 2.866837651091388 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3494850021680094 0.3252574989159953 [QP]S[Y{M(Oxidation (M))|F}]E[VP]ETVS 1.814 - 3012 1 1.175 79317.6 1.0 8028 5481 13503 HBL1_DMSO_200M_050219_1,13511 HBL1_DMSO_200M_050219_1,13511, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13512 67.98 468.0 450390.0 25 0 77163.0 + 23755 LVADHSDI 8 186 435.22210437141865 0 435.2211181521416 PEAK CID FTMS 0 0 0 13503 166944.84375 0.6166046568801431 7 -0.442291259765625 9 Unmodified _LVADHSDI_ REV__ENSG00000144057|ENST00000409382|ST6GAL2;REV__nc|ENSG00000144057|Q96JF0-2|ST6GAL2 10.183394434864962 0.5394990767616434 3 VAP 3 -1 11.682 0.0 0.0 1.3452 0.0 0.0 112.01660479939297 486.23301111392817 598.2496159133211 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VAP 1.3452 - 14 + 1 1.175 175497.5 1.0 8029 5481 13503 HBL1_DMSO_200M_050219_1,13512 HBL1_DMSO_200M_050219_1,13512,LVADHSDI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13513 67.987 362.0 358920.0 25 0 26387.0 + 15138 INTIPAPSAPV 11 192 540.3098713115581 0 540.3115112185478 PEAK CID FTMS 0 0 0 13503 175226.140625 1.0 0 0.0 10 Unmodified _INTIPAPSAPV_ ENSG00000186628|ENST00000334574|FSD2;nc|ENSG00000186628|A1L4K1-2|FSD2 31.26834338654808 0.2152680502973705 3 TNTQT 5 9 16.036 0.0 0.0 1.4867 0.0 0.0 226.15456323968527 304.1674898736938 530.3220531133791 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.6382104921644451 TNTQT 1.4867 - 970 + 1 1.175 108919.2 1.0 8030 5481 13503 HBL1_DMSO_200M_050219_1,13513 HBL1_DMSO_200M_050219_1,13513,INTIPAPSAPV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13514 67.996 514.0 296750.0 25 0 30301.0 + 37092 TGPLLIPG 8 187 384.23556222770833 766.4565715222167 2 384.2355529665947 MULTI CID FTMS 0 0 0 13503 157700.15625 0.0081849196378708 16 -0.5584564208984375 11 Unmodified _TGPLLIPG_ REV__ENSG00000174498|ENST00000327987|IGDCC3 5.760428011301431 0.7893668129297577 3 V 1 -1 10.181 0.0 0.0 1.3283 0.0 0.0 649.3772696196761 0.0 649.3772696196761 0.0 1.3146376536045563 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3283 - 43 + 1 1.175 117228.3 1.0 8031 5481 13503 HBL1_DMSO_200M_050219_1,13514 HBL1_DMSO_200M_050219_1,13514,TGPLLIPG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13515 68.004 373.0 209150.0 25 0 12950.0 + -1 SLQDWCGETGL 11 138 633.2788225951466 1264.5430922570931 2 633.2797729372978 MULTI CID FTMS 0 0 0 13503 134398.9375 1.0 0 0.0 12 Carbamidomethyl (C) _SLQDWC(Carbamidomethyl (C))GETGL_ REV__CON__ENSEMBL:ENSBTAP00000016285;REV__ENSG00000161031|ENST00000340880|PGLYRP2;REV__nc|ENSG00000161031|Q96PD5-2|PGLYRP2 17.11289562659939 0.6791789249425932 3 {M(Oxidation (M))|F}Y{[ET]|[MV]}S{I|L} 6 -1 28.461 0.0 0.0 2.2507 0.0 0.0 506.1844858655701 0.0 506.1844858655701 0.0 18.37205316164642 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {M(Oxidation (M))|F}Y{[ET]|[MV]}S{I|L} 2.2507 - 628 + 1 1.175 63042.6 1.0 8032 5481 13503 HBL1_DMSO_200M_050219_1,13515 HBL1_DMSO_200M_050219_1,13515,SLQDWCGETGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13516 68.013 517.0 90826.0 25 0 12101.0 + -1 NETCLRALRLS 11 86 666.8596755633379 0 666.8578979372978 PEAK CID FTMS 0 0 0 13503 132299.4375 1.0 0 0.0 13 Carbamidomethyl (C) _NETC(Carbamidomethyl (C))LRALRLS_ REV__ENSG00000132470|ENST00000200181|ITGB4;REV__ENST00000580542.5_1_17:73720783-73737087:+|nuORF;REV__nc|ENSG00000132470|P16144-2|ITGB4;REV__nc|ENSG00000132470|P16144-3|ITGB4;REV__nc|ENSG00000132470|P16144-4|ITGB4;REV__nc|ENSG00000132470|P16144-5|ITGB4 3.2813086475875832 0.4761840153648598 3 {I|L} 1 -1 6.9897 0.0 0.0 0.52487 0.0 0.0 129.22533020147154 1086.3713114227735 1215.5966416242452 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.52487 + + 5 + 1 1.175 44648.6 1.0 8033 5481 13503 HBL1_DMSO_200M_050219_1,13516 HBL1_DMSO_200M_050219_1,13516,NETCLRALRLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13517 68.024 621.0 207940.0 25 0 88726.0 -1 0 96 965.0045043826104 0 965.0045043826104 PEAK CID FTMS 0 0 0 -1 0 14 3 A{I|L}G{I|L}Q 5 -1 10.367 0.0 0.0 0.5377 0.0 0.0 1145.585594603308 297.10004602603755 1442.6856406293457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 A{I|L}G{I|L}Q 0.5377 - 354 + 1 1.175 89948.0 1.0 8034 5481 13503 HBL1_DMSO_200M_050219_1,13517 HBL1_DMSO_200M_050219_1,13517, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13518 68.033 536.0 241290.0 25 0 22893.0 + 45880 YYRDYPTLV 9 168 595.2983236169216 1188.5820943006431 2 595.2998535037041 MULTI CID FTMS 0 0 0 13503 94553.21875 0.1423249008449359 -5 0.4307098388671875 15 Unmodified _YYRDYPTLV_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87355723-87398314:+|nuORF 26.268140514670165 0.1969607489560049 3 RTY{I|L}V 5 5 45.675 0.0 0.0 3.8428 0.0 0.0 538.1964588849625 0.0 538.1964588849625 0.0 32.03076995955057 0.0 0.0 0 0.8252574989159953 0.0 0.8494850021680094 0.0 RTY{I|L}V 3.8428 - 1545 1 1.175 99870.8 1.0 8035 5481 13503 HBL1_DMSO_200M_050219_1,13518 HBL1_DMSO_200M_050219_1,13518,YYRDYPTLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13519 68.046 653.0 111640.0 25 0 25593.0 -1 0 79 1011.651599109173 0 1011.651599109173 PEAK CID FTMS 0 0 0 -1 0 16 3 C(Carbamidomethyl (C)) 1 -1 6.9897 0.0 0.0 0.3458 0.0 0.0 850.7209025296894 1007.5188082330686 1858.239710762758 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.3458 - 109 + 1 1.175 55921.6 1.0 8036 5481 13503 HBL1_DMSO_200M_050219_1,13519 HBL1_DMSO_200M_050219_1,13519, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13521 68.05 2.8 6063000.0 25 0 791110.0 -1 0 45 479.2843890451582 478.2771125785582 1 479.2846862673759 MULTI CID FTMS 0 0 0 13520 13940979.0 0.8786852791158298 1 -0.0281219482421875 1 3 [{M(Oxidation (M))|F}V]T{I|L} 4 -1 + 17.167 0.0 0.0 3.5893 3.5893 82.705 0.0 0.0 0.0 10.177287669604311 11.224862742317468 10.177287669604311 17.1669877129645 0 0.0 0.0 0.0 0.0 [{M(Oxidation (M))|F}V]T{I|L} 3.5893 - 13 + 1 1.175 19348.2 1.0 8037 5482 13520 HBL1_DMSO_200M_050219_1,13521 HBL1_DMSO_200M_050219_1,13521, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13522 68.051 5.7 5029300.0 25 0 315100.0 + 13905 HVVEILVET 9 56 519.79495259044 1037.5753522476798 2 519.7956420779228 MULTI CID FTMS 0 0 0 13520 8924804.0 0.6255189292843205 3 -0.1429214477539062 2 Unmodified _HVVEILVET_ ENSG00000170779|ENST00000336219|CDCA4 48.345845343767074 0.0439967357579942 3 [HV]VE{I|L}{I|L}VET 9 0 + 56.722 0.0 0.0 5.4668 5.4668 89.607 0.0 0.0 0.0 18.74143652831457 39.23061874357607 18.74143652831457 31.938200260161125 0 0.5629529932484498 1.3979400086720375 0.0 0.0 + + [HV]VE{I|L}{I|L}VET;{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}{I|L}VET 5.4668;2.3886 +;- + 49 1 1.175 28893.6 1.0 8038 5482 13520 HBL1_DMSO_200M_050219_1,13522 HBL1_DMSO_200M_050219_1,13522,HVVEILVET True True HVVEILVET 68.051039 519.795642077923 628303728.0 13520.0 ENSG00000170779|ENST00000336219|CDCA4 7.4611274401346845 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13523 68.052 4.7 17894000.0 25 0 2215900.0 + 19878 LHPPLLLR 8 67 320.21154587615865 957.612808228676 3 320.2113830447197 MULTI CID FTMS 0 0 0 13520 12786394.0 0.704294533000905 8 -0.3669815063476562 3 Unmodified _LHPPLLLR_ REV__ENST00000559694.5_1_14:24526437-24530034:+|nuORF 19.256988751693697 0.6264283240490721 3 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 -1 + 66.375 0.0 0.0 6.9313 6.9313 83.604 0.0 0.0 0.0 49.71971276399756 6.989700043360188 6.989700043360188 3.0102999566398125 0 0.0 1.5228787452803376 0.0 0.0 {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 6.9313;6.617;6.3026;4.398 -;-;-;- 146 + 1 1.175 73215.0 1.0 8039 5482 13520 HBL1_DMSO_200M_050219_1,13523 HBL1_DMSO_200M_050219_1,13523,LHPPLLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13524 68.053 11.0 4662500.0 25 0 1308100.0 + 39250 VAAGWLLVLR 10 55 549.3428286207777 1096.671104308355 2 549.3433105349541 MULTI CID FTMS 0 0 0 13520 5254505.5 0.5995089724875358 2 -0.1092987060546875 4 Unmodified _VAAGWLLVLR_ REV__ENSG00000205755|ENST00000400841|CRLF2;REV__nc|ENSG00000292363|Q9HC73-2|CRLF2 4.3292370932331545 0.7066112369704343 3 V{I|L}N 3 -1 13.812 0.0 0.0 1.2595 0.0 0.0 287.1984003062053 480.2584322565063 767.4568325627116 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}N 1.2595 - 9 + 1 1.175 44492.0 1.0 8040 5482 13520 HBL1_DMSO_200M_050219_1,13524 HBL1_DMSO_200M_050219_1,13524,VAAGWLLVLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13525 68.055 10.0 3588800.0 25 0 372070.0 -1 AVLDLVDQCP 10 70 565.2819386909483 0 565.2819091677666 PEAK CID FTMS 0 0 0 13520 5262223.5 0.8162996576713086 -1 0.1125640869140625 5 Carbamidomethyl (C) _AVLDLVDQC(Carbamidomethyl (C))P_ ENSG00000134326|ENST00000256722|CMPK2;nc|ENSG00000134326|Q5EBM0-2|CMPK2;nc|ENSG00000134326|Q5EBM0-3|CMPK2;nc|ENSG00000134326|Q5EBM0-4|CMPK2 29.081581746732265 0.2251250799338715 3 QNEM 4 -1 24.68 0.0 0.0 2.1869 0.0 0.0 400.2689757056917 223.0730074518188 623.3419831575105 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 QNEM 2.1869 - 191 + 1 1.175 32172.9 1.0 8041 5482 13520 HBL1_DMSO_200M_050219_1,13525 HBL1_DMSO_200M_050219_1,13525,AVLDLVDQCP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13526 68.056 15.0 4223700.0 25 0 395020.0 + 22584 LPYAVGKL 8 88 430.7656987363706 859.5168445395412 2 430.7657653689384 MULTI CID FTMS 0 0 0 13520 3736705.5 0.9233728548870184 -1 0.1125640869140625 6 Unmodified _LPYAVGKL_ ENSG00000165934|ENST00000298875|CPSF2 36.04419817259434 0.3004715606373109 3 {I|L}PYAVGK{I|L} 8 0 + 71.05 0.0 0.0 8.2663 8.2663 94.269 0.0 0.0 0.0 33.39948061694351 9.33053210369387 9.33053210369387 9.33053210369387 0 0.2614393726401688 1.6989700043360187 0.0 0.0 + + {I|L}PYAVGK{I|L};{I|L}PYAV[KA]V;{I|L}PYN{I|L}K{I|L} 8.2663;7.1807;6.0595 +;-;- + 136 + 1 1.175 57111.7 1.0 8042 5482 13520 HBL1_DMSO_200M_050219_1,13526 HBL1_DMSO_200M_050219_1,13526,LPYAVGKL False True LPYAVGKL 68.055753 430.765765368938 24730214.0 13520.0 ENSG00000165934|ENST00000298875|CPSF2 4.571161190668742 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13527 68.057 21.0 1526100.0 25 0 85419.0 + 25013 MPQIETRVI 9 61 543.8023031137895 1085.590053294379 2 543.8021728396416 MULTI CID FTMS 0 0 0 13520 2336296.25 0.8054737863336258 3 -0.1429214477539062 7 Unmodified _MPQIETRVI_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 14.218169984304629 0.4518140821082705 3 MPQ{I|L}E 5 4 51.013 0.0 0.0 4.6991 0.0 0.0 0.0 484.29035364322505 484.29035364322505 40.30008452963799 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.3807196863200844 + MPQ{I|L}E 4.6991 + + 42 + 1 1.175 29984.3 1.0 8043 5482 13520 HBL1_DMSO_200M_050219_1,13527 HBL1_DMSO_200M_050219_1,13527,MPQIETRVI False True MPQIETRVI 68.056933 543.802172839642 83858896.0 13520.0 ENSG00000114346|ENST00000392692|ECT2;;nc|ENSG00000114346|Q9H8V3-3|ECT2;;nc|ENSG00000114346|Q9H8V3-4|ECT2;;nc|ENSG00000114346|Q9H8V3-2|ECT2 5.4956374168396 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13528 68.058 17.0 2883400.0 25 0 297170.0 + 30410 RAYPAAITI 9 79 488.2865621111135 974.558571289027 2 488.2852355837822 MULTI CID FTMS 0 0 0 13520 2040038.375 0.5806822945542347 -2 0.1697769165039062 8 Unmodified _RAYPAAITI_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 20.453626601364224 0.2830276176381075 3 [{I|L}T][Q{I|L}]CA{I|L}T{I|L} 9 5 + 33.535 0.0 0.0 3.441 3.441 82.618 0.0 0.0 0.0 7.080977788579126 9.053783369835324 7.080977788579126 19.20818753952376 0 0.8182503180159344 1.5228787452803376 0.0 0.0 [{I|L}T][Q{I|L}]CA{I|L}T{I|L};[{I|L}T][Q{I|L}]{[WT]|[RM]}T{I|L} 3.441;1.47 -;- 102 1 1.175 43798.8 1.0 8044 5482 13520 HBL1_DMSO_200M_050219_1,13528 HBL1_DMSO_200M_050219_1,13528,RAYPAAITI False True RAYPAAITI 68.05811 488.285235583782 23930060.0 13520.0 nc|ENSG00000104517|O95071-2|UBR5;;ENSG00000104517|ENST00000520539|UBR5 5.152648289998372 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13529 68.059 25.0 1251000.0 25 0 126800.0 + 31540 RQLEAIVRI 9 62 366.5646406976726 1096.6720926932178 3 366.5645934939384 MULTI CID FTMS 0 0 0 13520 2040693.25 0.4750298887830004 1 -0.0281219482421875 9 Unmodified _RQLEAIVRI_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 16.149105407346934 0.3995459350917656 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EA{I|L}{I|L}[RV] 9 2 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}E + + 24.693 16.198 3.0778 2.2516 2.2516 49.08 0.0 0.0 0.0 0.0 8.494850021680094 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EA{I|L}{I|L}[RV] 2.2516 - 50 + 1 1.175 34225.7 1.0 8045 5482 13520 HBL1_DMSO_200M_050219_1,13529 HBL1_DMSO_200M_050219_1,13529,RQLEAIVRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13530 68.06 39.0 855910.0 25 0 145400.0 41247 VPGKVVPL 8 60 404.7682930862987 807.5220332393974 2 404.7681762576103 MULTI CID FTMS 0 0 0 13520 1852644.75 0.1963603881791909 5 -0.2840728759765625 10 Unmodified _VPGKVVPL_ ENSG00000135048|ENST00000377044|CEMIP2;nc|ENSG00000135048|Q9UHN6-2|CEMIP2 26.34127834903884 0.4900704351052977 3 [VP]KGV[VP]{I|L} 8 2 + 43.082 0.0 0.0 5.3351 5.3351 89.562 0.0 0.0 0.0 19.20818753952375 27.59758745913772 19.20818753952375 43.082137524178 0 0.5 1.2218487496163564 0.0 0.0 [VP]KGV[VP]{I|L} 5.3351 - 81 1 1.175 34440.1 1.0 8046 5482 13520 HBL1_DMSO_200M_050219_1,13530 HBL1_DMSO_200M_050219_1,13530,VPGKVVPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13531 68.062 28.0 2657100.0 25 0 213150.0 11497 GILIVVNTV 9 96 464.297315662682 926.580078392164 2 464.2974426150322 MULTI CID FTMS 0 0 0 13520 1675273.5 0.5219229080597522 -3 0.288116455078125 11 Unmodified _GILIVVNTV_ ENSG00000169241|ENST00000368404|SLC50A1;nc|ENSG00000169241|Q9BRV3-3|SLC50A1 27.22323531849824 0.1848086127304535 3 {[VA]|[{I|L}G]}{I|L}{I|L}V{[DA]|[EG]}KV 9 3 + 54.274 0.0 0.0 5.8575 5.8575 91.55 0.0 0.0 0.0 43.78971673256029 3.907429146509181 3.907429146509181 54.27426679760057 0 1.274227503252014 1.5228787452803376 0.2614393726401688 0.0 {[VA]|[{I|L}G]}{I|L}{I|L}V{[DA]|[EG]}KV 5.8575 - 179 + 1 1.175 61227.6 1.0 8047 5482 13520 HBL1_DMSO_200M_050219_1,13531 HBL1_DMSO_200M_050219_1,13531,GILIVVNTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13532 68.063 37.0 1298400.0 25 0 120640.0 + 5702 DPIVNRWYN 9 94 588.7908184564778 1175.5670839797556 2 588.7911865115166 MULTI CID FTMS 0 0 0 13520 1669317.25 0.7334105633227334 3 -0.1429214477539062 12 Unmodified _DPIVNRWYN_ REV__ENSG00000038002|ENST00000264595|AGA;REV__ENST00000506853.5_1_4:178355638-178363529:-|nuORF;REV__ENST00000510955.5_1_4:178358517-178361430:-|nuORF 30.63653989081413 0.1413794767160703 3 [DP]{I|L}QQ{I|L} 6 -1 69.385 0.0 0.0 5.9023 0.0 0.0 0.0 478.1817721002563 478.1817721002563 52.10531903759588 0.0 0.0 0.0 0 2.274227503252014 1.6989700043360187 0.0 0.4247425010840047 [DP]{I|L}QQ{I|L} 5.9023 - 518 + 1 1.175 43908.7 1.0 8048 5482 13520 HBL1_DMSO_200M_050219_1,13532 HBL1_DMSO_200M_050219_1,13532,DPIVNRWYN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13533 68.064 40.0 1772500.0 25 0 204530.0 + 3629 DADYAIKI 8 87 454.739735521762 907.464918110324 2 454.7398254275322 MULTI CID FTMS 0 0 0 13520 1610334.25 0.0865610266178499 5 -0.2840728759765625 13 Unmodified _DADYAIKI_ ENSG00000143368|ENST00000271628|SF3B4;ENST00000553618.1_1_14:67665960-67666731:+|nuORF 52.268347100219714 0.1285778651304833 3 {[DA]|[EG]}DYA{I|L}K{I|L} 8 0 + 69.223 0.0 0.0 7.6282 7.6282 82.444 0.0 0.0 0.0 22.21848749616356 1.249387366082999 1.249387366082999 1.249387366082999 0 1.5356668758921828 2.0 0.0 0.3054621874040891 + + {[DA]|[EG]}DYA{I|L}K{I|L};{[DA]|[EG]}DYA{I|L}{I|L}K 7.6282;7.4905 +;- + 155 + 1 1.175 58839.1 1.0 8049 5482 13520 HBL1_DMSO_200M_050219_1,13533 HBL1_DMSO_200M_050219_1,13533,DADYAIKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13534 68.065 29.0 1364500.0 25 0 138040.0 + 41353 VPKALEPYV 9 76 508.2952236047429 1014.5758942762858 2 508.2956420779228 MULTI CID FTMS 0 0 0 13520 1334172.75 0.1832205382031276 3 -0.1429214477539062 14 Unmodified _VPKALEPYV_ ENSG00000183434|ENST00000310125|TFDP3;ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1 26.88365393820708 0.1891292719743517 3 MPYV 4 6 27.384 0.0 0.0 2.699 0.0 0.0 506.34583553780766 0.0 506.34583553780766 0.0 15.165025357721548 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 MPYV 2.699 - 50 + 1 1.175 37316.0 1.0 8050 5482 13520 HBL1_DMSO_200M_050219_1,13534 HBL1_DMSO_200M_050219_1,13534,VPKALEPYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13535 68.066 35.0 1451500.0 25 0 190970.0 41677 VPREQIVV 8 88 470.2838627701942 938.5531726071883 2 470.2842590212822 MULTI CID FTMS 0 0 0 13520 1195809.5 1.0 0 0.0 15 Unmodified _VPREQIVV_ ENSG00000109814|ENST00000316423|UGDH;nc|ENSG00000109814|O60701-2|UGDH;nc|ENSG00000109814|O60701-3|UGDH 18.13498045792455 0.6430038125133779 3 [VP]SQ{I|L}[TP]VV 9 4 + 46.902 0.0 0.0 4.9972 4.9972 78.149 0.0 0.0 0.0 14.461499616092652 29.42734659086113 14.461499616092652 3.4948500216800937 0 0.3807196863200844 1.6989700043360187 0.7742275032520141 0.0 [VP]SQ{I|L}[TP]VV;[VP]SQ[TP]{I|L}VV;[VP]SQ[TP]VV{I|L};[VP]S[AG]{I|L}[TP]VV;[VP]S[AG][TP]{I|L}VV;[{I|L}P][NS]{I|L}[TP]VV;[{I|L}P][NS][TP]{I|L}VV;[{I|L}T]N[VP][TP]VV;{[QS]|[NT]}[VP]{I|L}[TP]VV;{[QS]|[NT]}[VP][TP]{I|L}VV 4.9972;4.6249;4.2192;4.0161;3.6438;2.491;2.1187;1.8068;1.4386;1.0662 -;-;-;-;-;-;-;-;-;- 200 1 1.175 45588.8 1.0 8051 5482 13520 HBL1_DMSO_200M_050219_1,13535 HBL1_DMSO_200M_050219_1,13535,VPREQIVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13536 68.068 59.0 804400.0 25 0 139140.0 + 15170 IPDGGVHII 9 75 460.76359746172113 919.5126419902424 2 460.7636596560478 MULTI CID FTMS 0 0 0 13520 1022607.125 0.5111041999180195 3 -0.1429214477539062 16 Unmodified _IPDGGVHII_ ENSG00000183808|ENST00000520560|RBM12B 28.486842064014134 0.1687311288560894 3 {I|L}PD 3 6 41.916 0.0 0.0 4.5585 0.0 0.0 0.0 591.3252657525999 591.3252657525999 15.428622230841768 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 0.4247425010840047 0.0 + {I|L}PD 4.5585 + + 91 + 1 1.175 42914.9 1.0 8052 5482 13520 HBL1_DMSO_200M_050219_1,13536 HBL1_DMSO_200M_050219_1,13536,IPDGGVHII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13537 68.069 37.0 636400.0 25 0 61359.0 36136 SVTQSNKVSVT 11 56 575.3106949135673 1148.6068368939343 2 575.3111450076103 MULTI CID FTMS 0 0 0 13520 916739.25 1.0 0 0.0 17 Unmodified _SVTQSNKVSVT_ ENSG00000127947|ENST00000248594|PTPN12;nc|ENSG00000127947|Q05209-2|PTPN12;nc|ENSG00000127947|Q05209-3|PTPN12 10.799506525563784 0.8105043987015127 3 {I|L} 1 11 12.474 0.0 0.0 1.086 0.0 0.0 1017.5116353331908 0.0 1017.5116353331908 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.086 - 13 + 1 1.175 24523.9 1.0 8053 5482 13520 HBL1_DMSO_200M_050219_1,13537 HBL1_DMSO_200M_050219_1,13537,SVTQSNKVSVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13538 68.072 121.0 765080.0 25 0 90964.0 + 42814 VVLDDVELREA 11 94 629.3381213165547 1256.6616896999094 2 629.3382446169853 MULTI CID FTMS 0 0 0 13520 870988.0 0.7402266008470655 -3 0.288116455078125 18 Unmodified _VVLDDVELREA_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 42.83518252547288 0.1687213420692654 3 VV{I|L}DDVE{I|L} 8 3 90.624 0.0 0.0 7.2115 0.0 0.0 0.0 371.1700465117891 371.1700465117891 67.64813089561756 0.0 0.0 0.0 0 1.1989700043360187 2.0 0.3252574989159953 0.0 + VV{I|L}DDVE{I|L} 7.2115 + + 380 + 1 1.175 73683.0 1.0 8054 5482 13520 HBL1_DMSO_200M_050219_1,13538 HBL1_DMSO_200M_050219_1,13538,VVLDDVELREA False True VVLDDVELREA 68.071522 629.338244616985 19221064.0 13520.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 6.406822840372722 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13539 68.073 31.0 1433500.0 25 0 118050.0 + + 32452 SAFDHFASV 9 78 490.7273631072425 979.4401732812852 2 490.7274047732353 MULTI CID FTMS 0 0 0 13520 724206.875 0.2073485420890353 -2 0.1697769165039062 19 Unmodified _SAFHDFASV_ ENSG00000081870|ENST00000194214|IFT25;ENST00000489675.1_1_1:54387326-54394129:-|nuORF 54.773552608820026 0.0299037012502309 3 {[SA]|[TG]}{M(Oxidation (M))|F}[HD]{M(Oxidation (M))|F}ASV 9 -1 + 40.344 0.0 0.0 4.1191 4.1191 83.825 0.0 0.0 0.0 7.705671471620619 11.751284189090825 7.705671471620619 15.471062485323507 0 1.0682503180159344 1.6989700043360187 0.6861818737241735 0.0 {[SA]|[TG]}{M(Oxidation (M))|F}[HD]{M(Oxidation (M))|F}ASV;{[SA]|[TG]}{M(Oxidation (M))|F}[HD]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ET]|[MV]}[C(Carbamidomethyl (C))R]ASASV;{[SA]|[TG]}{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[SA]|[TG]}{M(Oxidation (M))|F}[HS][{M(Oxidation (M))|F}V]SV;{[SA]|[TG]}{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV]SV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}[HD]{[WT]|[RM]};[RH]E[HD]{[WT]|[RM]} 4.1191;2.5395;2.0793;1.9203;1.8922;1.8114;0.77239;0.20389 +;-;-;-;-;-;-;- + 128 1 1.175 42300.7 1.0 8055 5482 13520 HBL1_DMSO_200M_050219_1,13539 HBL1_DMSO_200M_050219_1,13539,SAFHDFASV False False SAFDHFASV 68.072701 490.727404773235 20220762.0 13520.0 ENSG00000081870|ENST00000194214|IFT25;;ENST00000489675.1_1_1:54387326-54394129:-|nuORF 6.781612714131673 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13540 68.074 39.0 607040.0 25 0 49526.0 12705 GVLRVQSQG 9 57 472.2712481786904 942.5279434241808 2 472.2695800662041 MULTI CID FTMS 0 0 0 13520 737722.0 0.7392821162910355 2 -0.1092987060546875 20 Unmodified _GVLRVQSQG_ ENST00000423007.5_1_9:134378516-134379643:+|nuORF 1.844237919475145 0.850302753031785 3 Y 1 9 13.099 0.0 0.0 1.3898 0.0 0.0 761.4535548517183 0.0 761.4535548517183 0.0 6.109243748081781 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3898 - 2 + 1 1.175 26312.8 1.0 8056 5482 13520 HBL1_DMSO_200M_050219_1,13540 HBL1_DMSO_200M_050219_1,13540,GVLRVQSQG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13542 68.078 68.0 969290.0 25 0 87008.0 -1 FPFYGKPMRI 10 89 424.5583784215215 1270.6533058647644 3 424.5584594607353 MULTI CID FTMS 0 0 0 13541 770641.75 0.5786367632936209 -3 0.1978988647460937 1 Oxidation (M) _FPFYGKPM(Oxidation (M))RI_ ENSG00000125870|ENST00000246071|SNRPB2 20.580933911654288 0.5022139299129796 3 Y{M(Oxidation (M))|F}PE 4 -1 35.745 0.0 0.0 2.8132 0.0 0.0 716.4009401452442 0.0 716.4009401452442 0.0 19.143884953738347 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 Y{M(Oxidation (M))|F}PE 2.8132 - 559 1 1.175 59098.2 1.0 8057 5483 13541 HBL1_DMSO_200M_050219_1,13542 HBL1_DMSO_200M_050219_1,13542,FPFYGKPMRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13543 68.083 260.0 231950.0 25 0 18955.0 + 15492 IPSTELAKQVI 11 111 599.8559041663787 1197.6972553995572 2 599.8562499880791 MULTI CID FTMS 0 0 0 13541 596637.75 0.7551568253809541 2 -0.1147994995117187 2 Unmodified _IPSTELAKQVI_ ENSG00000099341|ENST00000215071|PSMD8 64.9267550582149 0.0491502274424461 3 [PS]TE{I|L}AKQ{I|L} 9 2 62.138 0.0 0.0 5.1881 0.0 0.0 0.0 227.14602183926343 227.14602183926343 28.581400436769044 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 1.3098943791441968 0.0 [PS]TE{I|L}AKQ{I|L} 5.1881 - 3452 1 1.175 49513.1 1.0 8058 5483 13541 HBL1_DMSO_200M_050219_1,13543 HBL1_DMSO_200M_050219_1,13543,IPSTELAKQVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13544 68.084 18.0 1787700.0 25 0 354580.0 42028 VQSHKDLIL 9 62 526.8082556787119 1051.6019584242238 2 526.8084594607353 MULTI CID FTMS 0 0 0 13541 2821318.75 0.7687386637651719 2 -0.1147994995117187 3 Unmodified _VQSHKDLIL_ ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1 24.020572477871973 0.2255576514309169 3 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L} 5 6 47.691 0.0 0.0 4.5351 0.0 0.0 433.22590834785314 0.0 433.22590834785314 0.0 37.74227503252014 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.3494850021680094 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L} 4.5351 - 47 1 1.175 28928.3 1.0 8059 5483 13541 HBL1_DMSO_200M_050219_1,13544 HBL1_DMSO_200M_050219_1,13544,VQSHKDLIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13545 68.085 31.0 723480.0 25 0 60033.0 + 18278 KVIEVFIRA 9 54 537.8371229977988 1073.6596930623975 2 537.8374511599541 MULTI CID FTMS 0 0 0 13541 840515.0625 1.0 0 0.0 4 Unmodified _KVIEVFIRA_ ENSG00000103479|ENST00000262133|RBL2;nc|ENSG00000103479|Q08999-2|RBL2 12.240655878213236 0.5053430591993562 3 KV{I|L}E 4 5 31.815 0.0 0.0 2.9632 0.0 0.0 0.0 601.3479708307249 601.3479708307249 20.221361390363608 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 + KV{I|L}E 2.9632 + + 13 + 1 1.175 25472.9 1.0 8060 5483 13541 HBL1_DMSO_200M_050219_1,13545 HBL1_DMSO_200M_050219_1,13545,KVIEVFIRA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13546 68.086 34.0 419220.0 25 0 44960.0 + 15583 IPYPLSENNQV 11 41 637.3245343686755 1272.6345158041509 2 637.3216430544853 MULTI CID FTMS 0 0 0 13541 825276.0 0.0683712788534897 -19 1.4819717407226562 5 Unmodified _IPYPLSENNQV_ ENSG00000104549|ENST00000265896|SQLE 27.628801355627647 0.4434699450731472 3 [{I|L}P]YP{I|L}{[ES]|[DT]|[{I|L}C]}NN{[QV]|[N{I|L}]|[RA]|[KV]} 11 0 + 51.47 0.0 0.0 4.0444 4.0444 78.683 0.0 0.0 0.0 6.690067809585756 7.367585652254185 6.690067809585756 6.690067809585756 0 0.0 1.5228787452803376 0.0 0.0 + + [{I|L}P]YP{I|L}{[ES]|[DT]|[{I|L}C]}NN{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}{[ES]|[DT]|[{I|L}C]}NN{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]YP{I|L}{[ES]|[DT]|[{I|L}C]}GGN{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]YP{I|L}{[ES]|[DT]|[{I|L}C]}NGG{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}{[ES]|[DT]|[{I|L}C]}GGN{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}{[ES]|[DT]|[{I|L}C]}NGG{[QV]|[N{I|L}]|[RA]|[KV]};{[QS]|[NT]}V[VG]{I|L}{[ES]|[DT]|[{I|L}C]}NN{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}S[VG]{I|L}{[ES]|[DT]|[{I|L}C]}NN{[QV]|[N{I|L}]|[RA]|[KV]} 4.0444;3.5187;3.3271;3.3271;2.8014;2.8014;1.8939;1.6172 +;-;-;-;-;-;-;- + 143 1 1.175 20359.6 1.0 8061 5483 13541 HBL1_DMSO_200M_050219_1,13546 HBL1_DMSO_200M_050219_1,13546,IPYPLSENNQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13547 68.088 64.0 557580.0 25 0 57609.0 + 13961 HYQLGLAY 8 60 482.747575813972 963.480598694744 2 482.7482482790947 MULTI CID FTMS 0 0 0 13541 531523.5 1.0 0 0.0 6 Unmodified _HYQLGLAY_ ENSG00000132780|ENST00000350030|NASP;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;ENST00000529239.1_1_8:61850552-61850903:-|nuORF;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP;nc|ENSG00000132780|P49321-4|NASP 19.438996006549623 0.6237395211498085 3 {[WN]|[YH]}Q{[VA]|[{I|L}G]}{I|L}AY 8 0 + 24.838 0.0 0.0 2.5779 2.5779 74.96 0.0 0.0 0.0 1.8791654952092784 12.161903266879715 1.8791654952092784 6.192803136799153 0 0.8182503180159344 0.0 0.0 0.0 + + {[WN]|[YH]}Q{[VA]|[{I|L}G]}{I|L}AY;[DP][KT][RN]AY;{[WN]|[YH]}[AG]{[VA]|[{I|L}G]}{I|L}AY;[DP][R{I|L}]{[ET]|[MV]}AY 2.5779;1.9352;1.6166;1.44 +;-;-;- + 60 1 1.175 33843.2 1.0 8062 5483 13541 HBL1_DMSO_200M_050219_1,13547 HBL1_DMSO_200M_050219_1,13547,HYQLGLAY False True HYQLGLAY 68.087905 482.748248279095 3195727.0 13541.0 nc|ENSG00000132780|P49321-2|NASP;;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;;ENSG00000132780|ENST00000350030|NASP;;nc|ENSG00000132780|P49321-4|NASP;;nc|ENSG00000132780|P49321-3|NASP;;ENST00000529239.1_1_8:61850552-61850903:-|nuORF 3.984552145004273 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13548 68.089 57.0 949800.0 25 0 75341.0 + 22351 LPSPLKQTI 9 113 498.80799909565616 0 498.8076049685478 PEAK CID FTMS 0 0 0 13541 414860.84375 0.6974325871838869 -1 0.0281219482421875 7 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 32.78568957990786 0.0971838787772021 3 PQS 3 7 20.049 0.0 0.0 2.0138 0.0 0.0 473.3227109825248 207.1143740289672 680.4370850114921 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 PQS 2.0138 - 259 + 1 1.175 48350.7 1.0 8063 5483 13541 HBL1_DMSO_200M_050219_1,13548 HBL1_DMSO_200M_050219_1,13548,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13549 68.095 319.0 185640.0 25 0 14996.0 -1 0 104 671.3532012341283 2011.0377743025847 3 671.3539916872978 MULTI CID FTMS 0 0 0 13541 339063.03125 0.9945667408236466 1 -0.0811767578125 8 3 W{M(Oxidation (M))|F} 2 -1 20.217 0.0 0.0 1.0053 0.0 0.0 1289.6732880786474 385.2097789450619 1674.8830670237094 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 W{M(Oxidation (M))|F} 1.0053 - 450 + 1 1.175 54551.5 1.0 8064 5483 13541 HBL1_DMSO_200M_050219_1,13549 HBL1_DMSO_200M_050219_1,13549, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13550 68.103 435.0 525340.0 25 0 34765.0 + 41263 VPGTEEPV 8 185 414.21214598120224 0 414.2120849490166 PEAK CID FTMS 0 0 0 13541 362681.84375 0.4390112809426263 -3 0.1978988647460937 9 Unmodified _VPGTEEPV_ REV__ENST00000327535.5_1_1:24495911-24496073:-|nuORF 15.768221252438446 0.4767174489346095 3 P 1 -1 6.7217 0.0 0.0 0.81336 0.0 0.0 248.11941050641104 478.2143038385376 726.3337143449486 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 P 0.81336 + + 79 + 1 1.175 176639.5 1.0 8065 5483 13541 HBL1_DMSO_200M_050219_1,13550 HBL1_DMSO_200M_050219_1,13550,VPGTEEPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13551 68.109 356.0 99052.0 25 0 4800.7 25156 MRKSQYRLHFY 11 72 764.8963870813864 1527.7782212295726 2 765.3965331912041 MULTI CID FTMS 0 0 0 13541 275543.0 0.8576277958767535 2 -0.1147994995117187 10 Unmodified _MRKSQYRLHFY_ ENSG00000215529|ENST00000400522|EFCAB8;nc|ENSG00000215529|A8MWE9|EFCAB8 4.897010918128616 0.8520435188433833 3 [KT]DASQ 6 10 33.148 0.0 0.0 2.1697 0.0 0.0 0.0 894.4242037408811 894.4242037408811 22.552418116331783 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 [KT]DASQ 2.1697 - 152 + 1 1.175 30829.9 1.0 8066 5483 13541 HBL1_DMSO_200M_050219_1,13551 HBL1_DMSO_200M_050219_1,13551,MRKSQYRLHFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13552 68.115 334.0 331350.0 25 0 28529.0 + 32484 SALDMEFERA 10 158 584.7693718009656 1167.524190668731 2 584.7694579958916 MULTI CID FTMS 0 0 0 13541 263740.96875 1.0 0 0.0 11 Unmodified _SALDMEFERA_ ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5 47.7319792270244 0.0934623409360514 3 {[SA]|[TG]}{I|L}DME{M(Oxidation (M))|F} 7 3 64.895 0.0 0.0 5.5584 0.0 0.0 0.0 371.1688936822876 371.1688936822876 41.59456678509251 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.3252574989159953 0.0 + {[SA]|[TG]}{I|L}DME{M(Oxidation (M))|F} 5.5584 + + 1193 + 1 1.175 86443.0 1.0 8067 5483 13541 HBL1_DMSO_200M_050219_1,13552 HBL1_DMSO_200M_050219_1,13552,SALDMEFERA True True SALDMEFERA 68.115397 584.769457995892 1717163.5 13541.0 nc|ENSG00000139197|P50542-2|PEX5;;ENSG00000139197|ENST00000675855|PEX5;;nc|ENSG00000139197|P50542-3|PEX5;;nc|ENSG00000139197|P50542-4|PEX5 7.63223139444987 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13553 68.117 95.0 592100.0 25 0 40518.0 + 27756 PLPGFRNI 8 100 457.2681581153235 0 457.2685729861259 PEAK CID FTMS 0 0 0 13541 222999.28125 0.3049611040858338 -3 0.1978988647460937 12 Unmodified _PLPGFRNI_ REV__ENSG00000176601|ENST00000392915|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-3|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-4|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-5|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-7|MAP3K19 15.768221252438446 0.4767174489346095 3 A 1 -1 8.4949 0.0 0.0 0.93092 0.0 0.0 655.4197868343596 183.0417116754516 838.4614985098111 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 A 0.93092 - 55 + 1 1.175 50831.2 1.0 8068 5483 13541 HBL1_DMSO_200M_050219_1,13553 HBL1_DMSO_200M_050219_1,13553,PLPGFRNI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13554 68.124 352.0 502670.0 25 0 18609.0 + 32333 RYMDAWNTV 9 192 578.2665754332969 1154.5185979333935 2 578.2679321169853 MULTI CID FTMS 0 0 0 13541 224957.921875 0.2199263506080115 -2 0.14068603515625 13 Unmodified _RYMDAWNTV_ ENSG00000099800|ENST00000215570|TIMM13 36.506200033944 0.094635877243972 3 [HV]VE[WD]GNTV 10 6 + 61.655 0.0 0.0 5.3404 5.3404 77.735 0.0 0.0 0.0 5.105450102066129 16.53212513775344 5.105450102066129 2.552725051033065 0 0.6421590589602533 1.6989700043360187 0.0 0.3807196863200844 [HV]VE[WD]GNTV;[HV]{I|L}D[WD]GNTV;[YE]{[WS]|[C(Carbamidomethyl (C)){I|L}]}AWNTV;[YE]V{[CA]|SS}AWNTV;[YE]V{[CA]|SS}AEGNTV;[HV]VEN{[ES]|[DT]|[{I|L}C]}NEV;[{I|L}P]HCDAWNTV;[YE]V[MN]WNTV;[HV]{I|L}DN{[ES]|[DT]|[{I|L}C]}NEV;[{I|L}P]HCDAEGNTV 5.3404;5.1193;4.8981;4.6374;4.6016;4.525;4.3382;4.3324;4.3039;4.3024 -;-;-;-;-;-;-;-;-;- 4445 1 1.175 133296.2 1.0 8069 5483 13541 HBL1_DMSO_200M_050219_1,13554 HBL1_DMSO_200M_050219_1,13554,RYMDAWNTV True True RYMDAWNTV 68.123811 578.267932116985 5500721.0 13541.0 ENSG00000099800|ENST00000215570|TIMM13 6.616436163584392 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13555 68.133 529.0 365230.0 25 0 23854.0 27951 PLVKPGGW 8 222 427.250969910262 852.4873868873241 2 427.2539550662041 MULTI CID FTMS 0 0 0 13541 185095.46875 0.3216586396664904 -3 0.1978988647460937 14 Unmodified _PLVKPGGW_ ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A 2.889219685676258 0.8067950007271085 3 P 1 7 12.474 0.0 0.0 1.4633 0.0 0.0 737.4234353265804 0.0 737.4234353265804 0.0 0.691513490831408 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 1.4633 + + 75 + 1 1.175 152536.8 1.0 8070 5483 13541 HBL1_DMSO_200M_050219_1,13555 HBL1_DMSO_200M_050219_1,13555,PLVKPGGW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13556 68.146 677.0 377900.0 25 0 19115.0 + 3142 AVPTHFFKV 9 282 349.1995241406401 0 349.1999084353447 PEAK CID FTMS 0 0 0 13541 146617.265625 0.5454500589830958 -1 0.0281219482421875 15 Unmodified _AVPTHFFKV_ ENSG00000167136|ENST00000372642|ENDOG 24.020572477871973 0.1646235280836931 3 G 1 9 6.9897 0.0 0.0 1.0037 0.0 0.0 554.2734246467115 82.06701074771718 636.3404353944287 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 1.0037 - 55 + 1 1.175 213604.5 1.0 8071 5483 13541 HBL1_DMSO_200M_050219_1,13556 HBL1_DMSO_200M_050219_1,13556,AVPTHFFKV False True AVPTHFFKV 68.146045 349.199908435345 2643245.75 13541.0 ENSG00000167136|ENST00000372642|ENDOG 4.829700469970703 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13557 68.155 507.0 228120.0 25 0 22729.0 + + 36559 DGPSGVLI 8 95 757.4452142455414 756.4379377789413 1 757.4464599490166 MULTI CID FTMS 0 0 0 13541 128433.09375 0.2064107761572609 4 -0.255950927734375 16 Unmodified _TALGLPVS_ ENSG00000189091|ENST00000302516|SF3B3 30.22481116460888 0.4082965392918993 3 [{I|L}P]{I|L}[TA]SR 7 -1 + 26.725 0.0 0.0 3.533 3.533 71.166 0.0 0.0 0.0 5.655075724862257 1.6634133262591178 1.6634133262591178 1.830532103693869 0 0.0 1.6989700043360187 0.25 0.0 [{I|L}P]{I|L}[TA]SR;[{I|L}P]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R;[{I|L}P][TA]{I|L}SR;[{I|L}P]{I|L}SR[TA];[{I|L}P]{I|L}S[TA]R;[{I|L}P]{I|L}[TA]A[TA];[{I|L}P][TA]{I|L}A[TA];[{I|L}P]{I|L}S[VG][TA] 3.533;3.291;3.2397;2.9255;2.8651;2.36;2.0667;1.6921 -;-;-;-;-;-;-;- 305 1 1.175 88288.7 1.0 8072 5483 13541 HBL1_DMSO_200M_050219_1,13557 HBL1_DMSO_200M_050219_1,13557,TALGLPVS False False DGPSGVLI 68.154993 757.446459949017 0.0 13541.0 ENSG00000189091|ENST00000302516|SF3B3 0.560579260190328 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13559 68.159 1.2 27934000.0 25 0 4166100.0 + 43599 YAFNMKATV 9 67 522.7625554766594 1043.5105580201189 2 522.7632324099541 MULTI CID FTMS 0 0 0 13558 61203864.0 1.0 0 0.0 1 Unmodified _YAFNMKATV_ ENSG00000109971|ENST00000534624|HSPA8 21.53697664764585 0.2571576504437394 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}AKMA{[QD]|[EN]|[WG]|[KD]|[RS]} 9 5 + 63.918 0.0 0.0 6.1253 6.1253 81.081 0.0 0.0 0.0 51.69978440589176 9.44968960007344 9.44968960007344 3.0102999566398125 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}AKMA{[QD]|[EN]|[WG]|[KD]|[RS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}AKAM{[QD]|[EN]|[WG]|[KD]|[RS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}[EP]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM[KA]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GGM[KA]TV 6.1253;5.8368;4.5207;4.3246;3.4422 -;-;-;+;- + 126 + 1 1.17 32875.6 1.0 8073 5484 13558 HBL1_DMSO_200M_050219_1,13559 HBL1_DMSO_200M_050219_1,13559,YAFNMKATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13560 68.16 2.7 13054000.0 25 0 2000400.0 22454 LPVAQVIF 8 52 443.7734746181057 885.5323963030114 2 443.7736083865166 MULTI CID FTMS 0 0 0 13558 29930276.0 0.9802955532723326 -2 0.1092987060546875 2 Unmodified _LPVAQVIF_ ENST00000254322.2_1_19:14625909-14626227:-|nuORF 19.438996006549623 0.6237395211498085 3 {I|L}P 2 6 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3728966698517 672.3728966698517 29.291746928241125 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 31 + 1 1.17 34802.1 1.0 8074 5484 13558 HBL1_DMSO_200M_050219_1,13560 HBL1_DMSO_200M_050219_1,13560,LPVAQVIF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13561 68.162 6.2 3306300.0 25 0 309260.0 -1 0 41 873.9143878058196 1745.8142226784391 2 873.9158813357353 MULTI CID FTMS 0 0 0 13558 12660671.0 1.0 0 0.0 3 3 {I|L}Q 2 -1 15.573 0.0 0.0 0.89203 0.0 0.0 1486.6599085688672 0.0 1486.6599085688672 0.0 4.6040937697618745 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Q 0.89203 - 18 + 1 1.17 22143.8 1.0 8075 5484 13558 HBL1_DMSO_200M_050219_1,13561 HBL1_DMSO_200M_050219_1,13561, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13562 68.163 6.4 6554000.0 25 0 615960.0 -1 FFHSLMVI 8 70 518.2680091404494 1034.5214653476987 2 518.2689697146416 MULTI CID FTMS 0 0 0 13558 10472369.0 0.924433001448392 -2 0.1092987060546875 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))FFHSLMVI_ ENST00000296464.8_1_4:128732609-128732648:+|nuORF 20.871210003555333 0.6025813472596342 3 TV{I|L} 3 -1 22.135 0.0 0.0 2.1396 0.0 0.0 703.310212546972 0.0 703.310212546972 0.0 4.176127934005436 0.0 0.0 0 0.7429928190999391 0.0 0.4247425010840047 0.0 TV{I|L} 2.1396 - 21 1 1.17 37705.8 1.0 8076 5484 13558 HBL1_DMSO_200M_050219_1,13562 HBL1_DMSO_200M_050219_1,13562,FFHSLMVI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13563 68.164 8.4 8204800.0 25 0 703800.0 + 8680 EVISKLYAV 9 101 511.3000831317905 1020.585613330381 2 511.3007079958916 MULTI CID FTMS 0 0 0 13558 8006239.5 0.118244108027752 5 -0.2375564575195312 5 Unmodified _EVISKLYAV_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 25.399314129420983 0.2080152500878129 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}HT{I|L}{I|L}SG 9 5 42.655 0.0 0.0 4.1795 0.0 0.0 0.0 68.05145441226796 68.05145441226796 14.632605981050908 0.0 0.0 0.0 0 0.5484550065040281 2.0 0.8252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}HT{I|L}{I|L}SG 4.1795 - 423 + 1 1.17 57083.4 1.0 8077 5484 13558 HBL1_DMSO_200M_050219_1,13563 HBL1_DMSO_200M_050219_1,13563,EVISKLYAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13564 68.165 11.0 1511100.0 25 0 207650.0 39202 TYSEFAREL 9 36 558.2720067651649 0 558.2720214724541 PEAK CID FTMS 0 0 0 13558 7136108.5 1.0 0 0.0 6 Unmodified _TYSEFAREL_ nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1 6.2057823575117 0.3444685223463735 3 E 1 8 6.9897 0.0 0.0 0.62714 0.0 0.0 850.4180847199797 132.0459383600219 982.4640230800017 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + E 0.62714 + + 3 + 1 1.17 20484.1 1.0 8078 5484 13558 HBL1_DMSO_200M_050219_1,13564 HBL1_DMSO_200M_050219_1,13564,TYSEFAREL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13565 68.166 8.5 4745600.0 25 0 599440.0 + 37269 TIPEAFRGV 9 55 495.2745744781841 988.5345960231682 2 495.2743713259697 MULTI CID FTMS 0 0 0 13558 6282102.0 0.8139003949529408 1 -0.0336227416992187 7 Unmodified _TIPEAFRGV_ ENSG00000213719|ENST00000375784|CLIC1 18.1463463914782 0.3454829746528889 3 [{I|L}T]PEA 5 4 45.471 0.0 0.0 4.5998 0.0 0.0 0.0 474.2468660943969 474.2468660943969 25.549537427956107 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + [{I|L}T]PEA 4.5998 + + 20 + 1 1.17 41621.9 1.0 8079 5484 13558 HBL1_DMSO_200M_050219_1,13565 HBL1_DMSO_200M_050219_1,13565,TIPEAFRGV False True TIPEAFRGV 68.16624 495.27437132597 56871840.0 13558.0 ENSG00000213719|ENST00000375784|CLIC1 7.293658415476481 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13566 68.167 12.0 1963100.0 25 0 283320.0 -1 EMCFDNQVSL 10 50 621.7598359144569 1241.5051188957136 2 621.7605468630791 MULTI CID FTMS 0 0 0 13558 6063056.5 0.4816351595632961 4 -0.220428466796875 8 Carbamidomethyl (C) _EMC(Carbamidomethyl (C))FDNQVSL_ ENSG00000166535|ENST00000299698|A2ML1;nc|ENSG00000166535|A8K2U0-2|A2ML1 8.745405648335112 0.6861838735306406 3 [NG]T[CS][W{M(Oxidation (M))|F}]EVS{I|L} 11 -1 [NG]T[CS][W{M(Oxidation (M))|F}]EV + + 23.756 6.6015 0.64507 1.9135 1.9135 48.755 0.0 0.0 0.0 0.0 7.557809497117844 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 [NG]T[CS][W{M(Oxidation (M))|F}]EVS{I|L} 1.9135 - 25 + 1 1.17 24242.1 1.0 8080 5484 13558 HBL1_DMSO_200M_050219_1,13566 HBL1_DMSO_200M_050219_1,13566,EMCFDNQVSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13567 68.169 11.0 3583400.0 25 0 513640.0 + 37498 TLGDVFRSL 9 73 504.27971494636216 1006.5448769595243 2 504.2803527712822 MULTI CID FTMS 0 0 0 13558 5303015.5 0.1019032837473365 10 -0.2878189086914062 9 Unmodified _TLGDVFRSL_ REV__ENSG00000155363|ENST00000369645|MOV10;REV__ENST00000468624.5_1_1:113217534-113241292:+|nuORF;REV__ENST00000496577.5_1_1:113231344-113241292:+|nuORF;REV__nc|ENSG00000155363|Q9HCE1-2|MOV10 20.453626601364224 0.2830276176381075 3 [{I|L}T]G[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 -1 + 50.792 0.0 0.0 5.0462 5.0462 83.572 0.0 0.0 0.0 9.030899869919438 10.330145895351848 9.030899869919438 9.030899869919438 0 0.8182503180159344 1.6989700043360187 0.4247425010840047 0.0 [{I|L}T]G[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L};[{M(Oxidation (M))|F}V][{I|L}V][YN]GPV 5.0462;4.149;2.9927;1.8033 -;-;-;- 212 1 1.17 36051.4 1.0 8081 5484 13558 HBL1_DMSO_200M_050219_1,13567 HBL1_DMSO_200M_050219_1,13567,TLGDVFRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13568 68.17 17.0 2550700.0 25 0 134230.0 -1 RCHRRRRRCCC 11 59 866.9067123982009 1731.7988718632016 2 867.4088622927666 MULTI CID FTMS 0 0 0 13558 3864850.25 0.2147690268279969 7 -0.2628707885742187 10 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 3 [MN]PN{I|L}NADQ 9 -1 52.285 0.0 0.0 3.0191 0.0 0.0 0.0 731.3481539361936 731.3481539361936 30.0667531214534 0.0 0.0 0.0 0 0.6677353201839438 1.5228787452803376 0.0 0.0 [MN]PN{I|L}NADQ 3.0191 - 123 + 1 1.17 35857.2 1.0 8082 5484 13558 HBL1_DMSO_200M_050219_1,13568 HBL1_DMSO_200M_050219_1,13568,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13569 68.171 23.0 3946000.0 25 0 521810.0 + 37118 TGYLNTVTV 9 104 484.25839615362605 966.502239374052 2 484.2586852908134 MULTI CID FTMS 0 0 0 13558 3781865.25 0.0089361059036315 -11 0.82989501953125 11 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 71.13359017698441 0.0206607516130725 3 TN{I|L}CTV 6 5 60.851 0.0 0.0 6.296 0.0 0.0 317.1928654500271 0.0 317.1928654500271 0.0 22.82718471961416 0.0 0.0 0 0.0 0.0 1.6549471895720984 0.7302046884880937 TN{I|L}CTV 6.296 - 1442 + 1 1.17 75782.0 1.0 8083 5484 13558 HBL1_DMSO_200M_050219_1,13569 HBL1_DMSO_200M_050219_1,13569,TGYLNTVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13570 68.172 15.0 5405100.0 25 0 638680.0 + 14425 IFPDRATLY 9 79 548.2948133033384 1094.5750736734767 2 548.2958251833916 MULTI CID FTMS 0 0 0 13558 3567606.0 1.0 0 0.0 12 Unmodified _IFPDRATLY_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1 36.506200033944 0.094635877243972 3 {I|L}{M(Oxidation (M))|F}PD 4 5 37.607 0.0 0.0 3.4358 0.0 0.0 0.0 619.3223591412517 619.3223591412517 3.67931555708239 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 + {I|L}{M(Oxidation (M))|F}PD 3.4358 + + 166 + 1 1.17 66675.4 1.0 8084 5484 13558 HBL1_DMSO_200M_050219_1,13570 HBL1_DMSO_200M_050219_1,13570,IFPDRATLY True True IFPDRATLY 68.172146 548.295825183392 64351848.0 13558.0 nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;;ENSG00000126457|ENST00000454376|PRMT1 5.561799685160319 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13571 68.173 31.0 1602600.0 25 0 146840.0 + 3332 AYMELQQKAEF 11 81 679.3264514065403 1356.6383498798805 2 679.3268920779228 MULTI CID FTMS 0 0 0 13558 2334173.5 1.0 0 0.0 13 Unmodified _AYMELQQKAEF_ ENSG00000117724|ENST00000366955|CENPF 70.49555756994154 0.0309684224005337 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ME[RV]{I|L}EAE{M(Oxidation (M))|F} 11 4 + 87.567 0.0 0.0 6.4547 6.4547 80.312 0.0 0.0 0.0 15.069850241487586 54.89909385331508 15.069850241487586 1.8297591317234208 0 1.2302046884880935 2.0 0.3807196863200844 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ME[RV]{I|L}EAE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ME{I|L}QQKAE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KQ]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}EAE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KQ]NQMKAE{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[WH]QQ{I|L}EAE{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}VREMYAE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ME[RV]{I|L}EM{[ES]|[DT]|[{I|L}C]};{[QN]|[E{I|L}]|[KN]}AVREMYAE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ME{I|L}QQKM{[ES]|[DT]|[{I|L}C]};{[VA]|[{I|L}G]}{I|L}EREMYAE{M(Oxidation (M))|F} 6.4547;6.3199;5.5878;5.012;4.7703;4.7129;4.6453;4.5715;4.5104;4.4573 -;+;-;-;-;-;-;-;-;- + 1139 1 1.17 43816.0 1.0 8085 5484 13558 HBL1_DMSO_200M_050219_1,13571 HBL1_DMSO_200M_050219_1,13571,AYMELQQKAEF True True AYMELQQKAEF 68.173326 679.326892077923 46692692.0 13558.0 ENSG00000117724|ENST00000366955|CENPF 9.158173561096191 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13572 68.175 89.0 1715200.0 25 0 433200.0 + 45704 YYDGDVGNYYY 11 126 696.2747492111519 1390.5349454891036 2 696.2755615115166 MULTI CID FTMS 0 0 0 13558 2194582.25 0.3392495469112985 5 -0.2375564575195312 14 Unmodified _YYDGDVGNYYY_ ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF 99.7552728972412 0.000328220943018 3 YYDGDYVGNYY 11 2 + 102.16 0.0 0.0 7.3471 7.3471 89.169 0.0 0.0 0.0 16.46771510124381 16.57577319177794 16.46771510124381 6.773174902439592 0 1.110924374808178 2.0 1.7658715643802765 0.4247425010840047 YYDGDYVGNYY;YYDGDVYGNYY;YYDGDVGNYYY;YYDGYDVGNYY;YYDGDYVGGGYY;YYDGDVGYNYY;YYDGVDYGNYY;{[YD]|[{M(Oxidation (M))|F}M]}GDYYVGNYY;YYDGVDGNYYY;YYDYGDVGNYY 7.3471;6.86;6.7853;6.3922;6.3852;6.2807;6.2243;6.1628;6.1495;5.9561 -;-;+;-;-;-;-;-;-;- + 12523 1 1.17 113018.5 1.0 8086 5484 13558 HBL1_DMSO_200M_050219_1,13572 HBL1_DMSO_200M_050219_1,13572,YYDGDVGNYYY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13573 68.177 51.0 1952300.0 25 0 529080.0 + 24420 MGAPALKI 8 97 400.7381234544866 799.4616939757732 2 400.7385436892509 MULTI CID FTMS 0 0 0 13558 1427739.875 0.6365268348509329 2 -0.1351089477539062 15 Unmodified _MGAPALKI_ ENSG00000197892|ENST00000524189|KIF13B;nc|ENSG00000197892|Q9NQT8-2|KIF13B 30.22481116460888 0.4082965392918993 3 MQPA{I|L}K{I|L} 7 2 + 35.24 0.0 0.0 4.408 4.408 80.407 0.0 0.0 0.0 21.295485955775497 7.933149390435084 7.933149390435084 7.3788807036638815 0 0.5 0.0 0.0 0.0 MQPA{I|L}K{I|L};MQ{I|L}[PA]K{I|L};M[AG]PA{I|L}K{I|L};M[AG]{I|L}[PA]K{I|L} 4.408;3.485;3.2409;2.3179 -;-;+;- + 118 + 1 1.17 81352.3 1.0 8087 5484 13558 HBL1_DMSO_200M_050219_1,13573 HBL1_DMSO_200M_050219_1,13573,MGAPALKI False True MGAPALKI 68.176624 400.738543689251 30927138.0 13558.0 nc|ENSG00000197892|Q9NQT8-2|KIF13B;;ENSG00000197892|ENST00000524189|KIF13B 5.358536561330159 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13574 68.178 31.0 2710600.0 25 0 196720.0 + -1 IPFPLCATGV 10 118 537.7852921056375 1073.556031278075 2 537.7838012576103 MULTI CID FTMS 0 0 0 13558 1376916.25 0.7050899633274589 -2 0.1092987060546875 16 Carbamidomethyl (C) _IPFPLC(Carbamidomethyl (C))ATGV_ REV__ENSG00000078589|ENST00000171757|P2RY10;REV__P2RY10|p.Y266Tfs*4|1|0.9|ENSG00000078589|chrX:78961311-78961311|T/-|frameshift_variant 26.88365393820708 0.3646707531412818 3 [EP]{I|L}{[QS]|[NT]}P{M(Oxidation (M))|F}TGV 10 -1 + 60.93 0.0 0.0 5.6755 5.6755 81.58 0.0 0.0 0.0 4.3933269383026285 6.409080081077981 4.3933269383026285 4.3933269383026285 0 1.426935982160881 0.8239087409443188 0.3807196863200844 0.0 [EP]{I|L}{[QS]|[NT]}P{M(Oxidation (M))|F}TGV;[VG][NG]{[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}TGV;[{I|L}P]C[Q{I|L}]P{M(Oxidation (M))|F}TGV;[{I|L}P]E{[QS]|[NT]}P{M(Oxidation (M))|F}TGV;{[QN]|[E{I|L}]|[KN]}A[Q{I|L}]P{M(Oxidation (M))|F}TGV;[QA]Q{[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}TGV;[QA]N[Q{I|L}]P{M(Oxidation (M))|F}TGV;[QA][AG]{[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}TGV;[EP]{I|L}[HQ]{[HG]|PP}TGV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ERRTGV 5.6755;5.2663;5.0138;5.0138;4.4802;4.2849;3.8405;3.4312;3.3796;3.3349 -;-;-;-;-;-;-;-;-;- 600 1 1.17 72268.8 1.0 8088 5484 13558 HBL1_DMSO_200M_050219_1,13574 HBL1_DMSO_200M_050219_1,13574,IPFPLCATGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13575 68.18 125.0 1728600.0 25 0 173870.0 + 32485 SALDTITTV 9 169 460.7502150266353 919.4858771200708 2 460.7503234744072 MULTI CID FTMS 0 0 0 13558 922694.375 0.0591265023298303 -2 0.1092987060546875 17 Unmodified _SALDTITTV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 64.23631603340823 0.0237365939569086 3 {[TV]|[{I|L}S]}EGT{I|L} 6 6 39.416 0.0 0.0 4.2868 0.0 0.0 0.0 316.1523559621207 316.1523559621207 19.118207447932825 0.0 0.0 0.0 0 0.25 1.3979400086720375 1.2302046884880935 0.0 {[TV]|[{I|L}S]}EGT{I|L} 4.2868 - 2821 1 1.17 166252.5 1.0 8089 5484 13558 HBL1_DMSO_200M_050219_1,13575 HBL1_DMSO_200M_050219_1,13575,SALDTITTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13576 68.182 97.0 1001900.0 25 0 127770.0 + 41875 VPYRVVGL 8 116 451.7762988942191 901.5380448552382 2 451.7764160037041 MULTI CID FTMS 0 0 0 13558 972036.375 0.704703365512314 2 -0.1351089477539062 18 Unmodified _VPYRVVGL_ ENSG00000176624|ENST00000406189|MEX3C;ENSG00000181588|ENST00000402693|MEX3D;ENSG00000183496|ENST00000329713|MEX3B;ENSG00000254726|ENST00000532414|MEX3A;ENST00000558133.1_1_15:82335503-82336997:-|nuORF;nc|ENSG00000181588|Q86XN8-2|MEX3D;nc|ENSG00000181588|Q86XN8-3|MEX3D 38.15118350030904 0.2652218139009398 3 VPY 3 5 43.416 0.0 0.0 4.8158 0.0 0.0 0.0 539.3323458307249 539.3323458307249 15.791812460476253 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + VPY 4.8158 + + 403 + 1 1.17 79709.4 1.0 8090 5484 13558 HBL1_DMSO_200M_050219_1,13576 HBL1_DMSO_200M_050219_1,13576,VPYRVVGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13577 68.185 105.0 759340.0 25 0 92069.0 + 27577 PLDAGFLDTID 11 120 392.863093441669 1175.5674509252071 3 392.8631164431572 MULTI CID FTMS 0 0 0 13558 859659.5625 0.4964475864247509 3 -0.174774169921875 19 Unmodified _PLDAGFLDTID_ REV__ENSG00000112159|ENST00000369393|MDN1 22.736283301280096 0.5583477779825423 3 [DP]{I|L}QQ 5 -1 52.792 0.0 0.0 4.4907 0.0 0.0 0.0 591.2634513436933 591.2634513436933 36.096981436199016 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.3494850021680094 0.3807196863200844 [DP]{I|L}QQ 4.4907 - 598 1 1.17 67195.8 1.0 8091 5484 13558 HBL1_DMSO_200M_050219_1,13577 HBL1_DMSO_200M_050219_1,13577,PLDAGFLDTID False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13578 68.189 212.0 615850.0 25 0 60286.0 + 32522 SALPVSPSI 9 154 435.7501411687439 869.4857294042878 2 435.7503234744072 MULTI CID FTMS 0 0 0 13558 628651.75 0.3995745891544546 -2 0.1092987060546875 20 Unmodified _SALPVSPSI_ ENSG00000115109|ENST00000263713|EPB41L5;ENST00000461128.1_1_2:120849230-120885432:+|nuORF;ENST00000489017.5_1_2:120849230-120859177:+|nuORF;nc|ENSG00000115109|Q9HCM4-2|EPB41L5;nc|ENSG00000115109|Q9HCM4-3|EPB41L5;nc|ENSG00000115109|Q9HCM4-4|EPB41L5 30.63653989081413 0.1413794767160703 3 [{I|L}V]A[RD]ET 7 8 28.307 0.0 0.0 3.2556 0.0 0.0 0.0 82.06700311832265 82.06700311832265 13.341218823962109 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4361818737241735 0.0 [{I|L}V]A[RD]ET 3.2556 - 333 + 1 1.17 107421.9 1.0 8092 5484 13558 HBL1_DMSO_200M_050219_1,13578 HBL1_DMSO_200M_050219_1,13578,SALPVSPSI False True SALPVSPSI 68.18869 435.750323474407 5091068.0 13558.0 nc|ENSG00000115109|Q9HCM4-3|EPB41L5;;ENSG00000115109|ENST00000263713|EPB41L5;;nc|ENSG00000115109|Q9HCM4-4|EPB41L5;;ENST00000461128.1_1_2:120849230-120885432:+|nuORF;;ENST00000489017.5_1_2:120849230-120859177:+|nuORF;;nc|ENSG00000115109|Q9HCM4-2|EPB41L5 3.864817301432292 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13580 68.195 239.0 420010.0 25 0 71689.0 26477 NTLSMGIEYHE 11 123 647.2938980861571 1292.5732432391142 2 647.2949096560478 MULTI CID FTMS 0 0 0 13579 665580.75 0.6066497332728428 3 -0.1868057250976562 1 Unmodified _NTLSMGIEYHE_ ENSG00000006283|ENST00000359106|CACNA1G;nc|ENSG00000006283|O43497-10|CACNA1G;nc|ENSG00000006283|O43497-11|CACNA1G;nc|ENSG00000006283|O43497-12|CACNA1G;nc|ENSG00000006283|O43497-13|CACNA1G;nc|ENSG00000006283|O43497-15|CACNA1G;nc|ENSG00000006283|O43497-16|CACNA1G;nc|ENSG00000006283|O43497-17|CACNA1G;nc|ENSG00000006283|O43497-18|CACNA1G;nc|ENSG00000006283|O43497-19|CACNA1G;nc|ENSG00000006283|O43497-2|CACNA1G;nc|ENSG00000006283|O43497-20|CACNA1G;nc|ENSG00000006283|O43497-21|CACNA1G;nc|ENSG00000006283|O43497-22|CACNA1G;nc|ENSG00000006283|O43497-23|CACNA1G;nc|ENSG00000006283|O43497-24|CACNA1G;nc|ENSG00000006283|O43497-25|CACNA1G;nc|ENSG00000006283|O43497-26|CACNA1G;nc|ENSG00000006283|O43497-27|CACNA1G;nc|ENSG00000006283|O43497-28|CACNA1G;nc|ENSG00000006283|O43497-29|CACNA1G;nc|ENSG00000006283|O43497-3|CACNA1G;nc|ENSG00000006283|O43497-30|CACNA1G;nc|ENSG00000006283|O43497-31|CACNA1G;nc|ENSG00000006283|O43497-32|CACNA1G;nc|ENSG00000006283|O43497-33|CACNA1G;nc|ENSG00000006283|O43497-34|CACNA1G;nc|ENSG00000006283|O43497-35|CACNA1G;nc|ENSG00000006283|O43497-36|CACNA1G;nc|ENSG00000006283|O43497-4|CACNA1G;nc|ENSG00000006283|O43497-5|CACNA1G;nc|ENSG00000006283|O43497-6|CACNA1G;nc|ENSG00000006283|O43497-7|CACNA1G;nc|ENSG00000006283|O43497-8|CACNA1G;nc|ENSG00000006283|O43497-9|CACNA1G 20.41453444215458 0.6105011870913812 3 {[QS]|[NT]}{I|L}EYE[TA]Y 9 7 48.488 0.0 0.0 3.7513 0.0 0.0 0.0 205.07175333116416 205.07175333116416 24.38512629993945 0.0 0.0 0.0 0 0.6989700043360187 0.7695510786217261 1.079689690656103 0.6861818737241735 {[QS]|[NT]}{I|L}EYE[TA]Y 3.7513 - 1177 1 1.17 80369.1 1.0 8093 5485 13579 HBL1_DMSO_200M_050219_1,13580 HBL1_DMSO_200M_050219_1,13580,NTLSMGIEYHE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13581 68.198 122.0 534840.0 25 0 52552.0 + 37740 KTYEAALETI 10 111 569.8035269246687 0 569.8038207888603 PEAK CID FTMS 0 0 0 13579 507908.875 0.3353061963307587 3 -0.1868057250976562 2 Unmodified _TLRCFRETL_ ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11;ENST00000585265.1_1_17:30807457-30807646:+|nuORF 25.399314129420983 0.152124705672316 3 E{I|L}AKT 5 7 28.404 0.0 0.0 2.4969 0.0 0.0 232.14144846746092 360.1213472955688 592.2627957630298 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.3494850021680094 E{I|L}AKT 2.4969 - 165 + 1 1.17 55588.5 1.0 8094 5485 13579 HBL1_DMSO_200M_050219_1,13581 HBL1_DMSO_200M_050219_1,13581,TLRCFRETL False False KTYEAALETI 68.197557 569.80382078886 18962752.0 13579.0 ENSG00000108671|ENST00000261712|PSMD11;;nc|ENSG00000108671|O00231-2|PSMD11;;ENST00000585265.1_1_17:30807457-30807646:+|nuORF 5.052140394846599 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13582 68.199 4.1 12319000.0 25 0 2637400.0 + 37879 TLVYHVVGV 9 70 493.78641273208495 985.55827253097 2 493.7872802615166 MULTI CID FTMS 0 0 0 13579 12352979.0 0.5445223724447672 -1 0.0336227416992187 3 Unmodified _TLVYHVVGV_ ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3 38.15118350030904 0.0856056900103839 3 [{I|L}T]VCV 5 5 36.299 0.0 0.0 3.6831 0.0 0.0 0.0 467.2418612115844 467.2418612115844 3.490217871458867 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]VCV 3.6831 - 146 + 1 1.17 48386.5 1.0 8095 5485 13579 HBL1_DMSO_200M_050219_1,13582 HBL1_DMSO_200M_050219_1,13582,TLVYHVVGV True True TLVYHVVGV 68.198734 493.787280261517 192023616.0 13579.0 nc|ENSG00000189091|Q15393-2|SF3B3;;ENSG00000189091|ENST00000302516|SF3B3 7.341392993927002 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13583 68.2 17.0 2376400.0 25 0 244650.0 + 22950 LSERRLDL 8 90 501.2911762178067 1000.5677995024134 2 501.2911559939384 MULTI CID FTMS 0 0 0 13579 2536786.75 0.6950371082929802 11 -0.2924423217773437 4 Unmodified _LSERRLDL_ REV__ENST00000376055.8_1_20:30310076-30310447:-|nuORF;REV__ENST00000376062.6_1_20:30310076-30310181:-|nuORF;REV__ENST00000420488.5_1_20:30310076-30311747:-|nuORF;REV__ENST00000422920.1_1_20:30310076-30310447:-|nuORF;REV__ENST00000439267.1_1_20:30310076-30311747:-|nuORF;REV__ENST00000450273.1_1_20:30310076-30311603:-|nuORF;REV__ENST00000456404.5_1_20:30310076-30311747:-|nuORF 18.13498045792455 0.6430038125133779 3 DVV[WH] 5 -1 13.812 0.0 0.0 1.3804 0.0 0.0 346.2551296799509 0.0 346.2551296799509 0.0 0.083559388717374 0.0 0.0 0 0.0 0.0 0.0 0.0 DVV[WH] 1.3804 - 142 + 1 1.17 35939.4 1.0 8096 5485 13579 HBL1_DMSO_200M_050219_1,13583 HBL1_DMSO_200M_050219_1,13583,LSERRLDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13584 68.202 85.0 858940.0 25 0 131770.0 7474 EGSDIYDLL 9 99 342.16657458177826 1023.4778943455348 3 342.1661254763603 MULTI CID FTMS 0 0 0 13579 813608.125 0.2667526298158167 -1 0.0336227416992187 5 Unmodified _EGSDIYDLL_ ENSG00000143951|ENST00000272321|WDPCP;ENST00000409835.5_1_2:63587012-63815411:-|nuORF;ENST00000493315.1_1_2:63631156-63711794:-|nuORF;nc|ENSG00000143951|O95876-2|WDPCP;nc|ENSG00000143951|O95876-3|WDPCP 28.486842064014134 0.1687311288560894 3 {[DA]|[EG]}[DG]H{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L} 9 4 + 32.157 0.0 0.0 3.1419 3.1419 82.792 0.0 0.0 0.0 17.570320005642394 5.105538296906154 5.105538296906154 32.156907015634964 0 0.3494850021680094 2.0 0.0 0.0 {[DA]|[EG]}[DG]H{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L} 3.1419 - 143 + 1 1.17 64300.1 1.0 8097 5485 13579 HBL1_DMSO_200M_050219_1,13584 HBL1_DMSO_200M_050219_1,13584,EGSDIYDLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13585 68.203 44.0 678670.0 25 0 54275.0 23730 LTVQEMDWL 9 61 567.7795916647638 1133.5446303963274 2 567.7806884646416 MULTI CID FTMS 0 0 0 13579 745729.0625 1.0 0 0.0 6 Unmodified _LTVQEMDWL_ ENSG00000090539|ENST00000204604|CHRD;ENST00000460627.5_1_3:184100608-184100992:+|nuORF;ENST00000470150.5_1_3:184100608-184105741:+|nuORF;nc|ENSG00000090539|Q9H2X0-5|CHRD 7.289230182591677 0.6602208344931196 3 {[QN]|[E{I|L}]|[KN]}[KA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P 8 6 31.171 0.0 0.0 2.7499 0.0 0.0 0.0 218.98860703899587 218.98860703899587 15.686362358410122 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[KA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P 2.7499 - 38 1 1.17 29643.2 1.0 8098 5485 13579 HBL1_DMSO_200M_050219_1,13585 HBL1_DMSO_200M_050219_1,13585,LTVQEMDWL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13586 68.209 325.0 394530.0 25 0 43538.0 11361 GGAAPHPP 8 113 703.3512810737873 702.3440046071872 1 703.3519164919853 MULTI CID FTMS 0 0 0 13579 437065.125 0.7638405536931463 1 -0.1014862060546875 7 Unmodified _GGAAPHPP_ ENST00000609471.1_1_9:139694428-139695055:+|nuORF 0.7936320650641473 0.8195151834710337 3 EEA{I|L}E{I|L} 6 7 + 71.846 0.0 0.0 10.229 10.229 92.892 0.0 0.0 0.0 7.17010230128993 16.197887582883936 7.17010230128993 7.17010230128993 0 1.2786596949921218 0.8538719643217619 1.5114393726401687 0.0 EEA{I|L}E{I|L};[{I|L}A]EEE{I|L};{[QN]|[E{I|L}]|[KN]}AEE{I|L};EEAE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}EAE{I|L};EE{I|L}AE{I|L};{[CP]|[EA]}E{I|L}E{I|L};EEEA{I|L}{I|L};{[CP]|[EA]}{I|L}EE{I|L};{[CP]|[EA]}EE{I|L}{I|L} 10.229;9.2085;9.1784;8.585;8.4515;8.1319;7.3029;6.5691;5.9323;5.6585 -;-;-;-;-;-;-;-;-;- 389 1 1.17 97411.7 1.0 8099 5485 13579 HBL1_DMSO_200M_050219_1,13586 HBL1_DMSO_200M_050219_1,13586,GGAAPHPP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13587 68.213 222.0 852970.0 25 0 172090.0 -1 0 159 323.1965934873896 322.1893170207896 1 323.1964294314384 MULTI CID FTMS 0 0 0 13579 414075.90625 0.5340524603907122 3 -0.1868057250976562 8 3 G 1 -1 9.6041 0.0 0.0 2.9809 0.0 0.0 247.15650101912783 0.0 247.15650101912783 0.0 1.3553338614326904 0.0 0.0 0 0.0 0.0 0.0 0.0 G 2.9809 - 25 + 1 1.17 154737.7 1.0 8100 5485 13579 HBL1_DMSO_200M_050219_1,13587 HBL1_DMSO_200M_050219_1,13587, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13588 68.216 145.0 564940.0 25 0 33972.0 -1 LTMDLCSKL 9 134 540.776088653494 1079.5376243737878 2 540.7762328982353 MULTI CID FTMS 0 0 0 13579 396709.0625 1.0 0 0.0 9 Carbamidomethyl (C) _LTMDLC(Carbamidomethyl (C))SKL_ ENSG00000130997|ENST00000511885|POLN;ENST00000515357.5_1_4:2158125-2230958:-|nuORF;nc|ENSG00000130997|Q7Z5Q5-3|POLN 10.823927491677226 0.5436922275383211 3 {[QN]|[E{I|L}]|[KN]}KK{I|L} 5 -1 28.416 0.0 0.0 2.6323 0.0 0.0 0.0 465.1130722344839 465.1130722344839 9.24279286061882 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.3494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}KK{I|L} 2.6323 - 481 1 1.17 69373.4 1.0 8101 5485 13579 HBL1_DMSO_200M_050219_1,13588 HBL1_DMSO_200M_050219_1,13588,LTMDLCSKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13589 68.218 99.0 605420.0 25 0 91352.0 33357 SGHGNAIP 8 84 376.687578385724 751.3606038382479 2 376.6875182986259 MULTI CID FTMS 0 0 0 13579 371955.5625 0.1123121632072576 6 -0.229248046875 10 Unmodified _SGHGNAIP_ ENSG00000142303|ENST00000597188|ADAMTS10;ENST00000601163.1_1_19:8661189-8662174:-|nuORF;nc|ENSG00000142303|Q9H324|ADAMTS10 2.889219685676258 0.8067950007271085 3 [DN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}P{I|L} 6 7 [DN] + + 21.274 -1.3823 -0.60344 2.8314 2.8314 49.858 0.0 0.0 0.0 0.0 9.491080192370712 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 [DN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}P{I|L} 2.8314 - 72 + 1 1.17 53434.2 1.0 8102 5485 13579 HBL1_DMSO_200M_050219_1,13589 HBL1_DMSO_200M_050219_1,13589,SGHGNAIP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13590 68.227 492.0 429840.0 25 0 89890.0 + 7399 EGIQEEQKW 9 186 382.8528261605536 1145.5366490818608 3 382.8527099490166 MULTI CID FTMS 0 0 0 13579 373913.28125 0.7106504815227223 -1 0.0336227416992187 11 Unmodified _EGIQEEQKW_ REV__ENSG00000261649|ENST00000567390|GOLGA6L7;REV__ENSG00000261649|ENST00000567390|GOLGA6L7 4.3292370932331545 0.7635526921153418 3 {[DA]|[EG]}[PA]KPN 7 -1 23.328 0.0 0.0 2.0364 0.0 0.0 0.0 449.1582060489108 449.1582060489108 7.331760026725391 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 {[DA]|[EG]}[PA]KPN 2.0364 - 325 1 1.17 170053.9 1.0 8103 5485 13579 HBL1_DMSO_200M_050219_1,13590 HBL1_DMSO_200M_050219_1,13590,EGIQEEQKW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13591 68.231 214.0 675790.0 25 0 66544.0 + 12526 GVGIRNRP 8 148 434.7594325280603 867.5043121229206 2 434.7596008181572 MULTI CID FTMS 0 0 0 13579 333811.875 0.1687743539857998 -1 0.0336227416992187 12 Unmodified _GVGIRNRP_ REV__ENSG00000079999|ENST00000171111|KEAP1 2.889219685676258 0.8067950007271085 3 [{I|L}T]T[RK]H{I|L} 7 -1 [{I|L}T]T[RK]H + + 11.42 -3.0364 -0.41232 1.3164 1.3164 48.468 0.0 0.0 0.0 0.0 -9.54911684825456 -9.54911684825456 0.0 0 0.0 0.0 0.0 0.0 [{I|L}T]T[RK]H{I|L} 1.3164 - 90 + 1 1.17 115439.2 1.0 8104 5485 13579 HBL1_DMSO_200M_050219_1,13591 HBL1_DMSO_200M_050219_1,13591,GVGIRNRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13592 68.241 578.0 456500.0 25 0 26007.0 + 18045 KTAEFLSKL 9 258 346.2058291045556 1035.5956579138667 3 346.2057067751884 MULTI CID FTMS 0 0 0 13579 303797.40625 1.0 0 0.0 13 Unmodified _KTAEFLSKL_ ENSG00000133106|ENST00000313624|EPSTI1;ENST00000535677.5_1_13:43491732-43537592:-|nuORF;nc|ENSG00000133106|Q96J88-3|EPSTI1;nc|ENSG00000133106|Q96J88|EPSTI1 17.04857598603903 0.3751983262162568 3 [KS][DV]{M(Oxidation (M))|F} 5 7 25.132 0.0 0.0 2.4268 0.0 0.0 0.0 456.2816757022797 456.2816757022797 9.96497655749356 0.0 0.0 0.0 0 0.7742275032520141 0.0 1.0114393726401687 0.0796896906561032 [KS][DV]{M(Oxidation (M))|F} 2.4268 - 469 1 1.17 210278.2 1.0 8105 5485 13579 HBL1_DMSO_200M_050219_1,13592 HBL1_DMSO_200M_050219_1,13592,KTAEFLSKL False True KTAEFLSKL 68.241044 346.205706775188 1199989.875 13579.0 nc|ENSG00000133106|Q96J88|EPSTI1;;nc|ENSG00000133106|Q96J88-3|EPSTI1;;ENSG00000133106|ENST00000313624|EPSTI1;;ENST00000535677.5_1_13:43491732-43537592:-|nuORF 2.5238926708698277 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13593 68.248 380.0 340930.0 25 0 14376.0 -1 CGCSSASCCTV 11 153 624.7108374924466 1247.407122051693 2 624.7115356326103 MULTI CID FTMS 0 0 0 13579 245997.640625 0.3582983224450017 -1 0.0336227416992187 14 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))GC(Carbamidomethyl (C))SSASC(Carbamidomethyl (C))C(Carbamidomethyl (C))TV_ ENSG00000143507|ENST00000366899|DUSP10 5.731851221503515 0.8481046878870278 3 {[QG]|[NA]}W 3 -1 17.192 0.0 0.0 1.3782 0.0 0.0 0.0 873.2249375636649 873.2249375636649 0.4462746213231376 0.0 0.0 0.0 0 0.4247425010840047 0.3010299956639812 0.0 0.4247425010840047 {[QG]|[NA]}W 1.3782 - 544 1 1.17 100148.6 1.0 8106 5485 13579 HBL1_DMSO_200M_050219_1,13593 HBL1_DMSO_200M_050219_1,13593,CGCSSASCCTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13594 68.256 398.0 160570.0 25 0 9997.8 -1 0 91 770.0268596272151 0 769.6960937380791 PEAK CID FTMS 0 0 0 13579 139229.125 0.8334089206643542 -1 0.0336227416992187 15 3 NG 2 -1 7.9697 0.0 0.0 0.51817 0.0 0.0 1099.8157604147832 264.13437830142817 1363.9501387162113 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 NG 0.51817 - 248 + 1 1.17 51174.8 1.0 8107 5485 13579 HBL1_DMSO_200M_050219_1,13594 HBL1_DMSO_200M_050219_1,13594, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13595 68.262 326.0 195370.0 25 0 17195.0 + 16387 IYQQIIQTY 9 117 585.3133515266711 1168.612150120142 2 585.8149902224541 MULTI CID FTMS 0 0 0 13579 235384.234375 0.3043599140261422 -9 0.6861953735351562 16 Unmodified _IYQQIIQTY_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000467785.5_1_7:158424360-158447992:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 21.74664581756881 0.2544899275067181 3 {I|L}{I|L}HTY 5 5 34.825 0.0 0.0 2.9801 0.0 0.0 523.2628052620043 0.0 523.2628052620043 0.0 23.181827666780308 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 {I|L}{I|L}HTY 2.9801 - 460 + 1 1.17 57171.3 1.0 8108 5485 13579 HBL1_DMSO_200M_050219_1,13595 HBL1_DMSO_200M_050219_1,13595,IYQQIIQTY False True IYQQIIQTY 68.262111 585.314 9143248.0 13579.0 ENST00000467785.5_1_7:158424360-158447992:-|nuORF;;nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENSG00000146918|ENST00000356309|NCAPG2 6.139486789703369 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13596 68.268 328.0 164660.0 25 0 13400.0 24662 MLTADGDLYTL 11 105 606.7923400925553 0 606.7921630740166 PEAK CID FTMS 0 0 0 13579 235135.09375 0.6639293257983001 -2 0.1147994995117187 17 Unmodified _MLTADGDLYTL_ ENSG00000180198|ENST00000683442|RCC1;ENST00000429051.1_1_1:28858469-28862138:+|nuORF;nc|ENSG00000180198|P18754-2|RCC1 16.149105407346934 0.3934762919021404 3 Y{I|L} 2 9 14.464 0.0 0.0 1.1938 0.0 0.0 232.1443893021652 700.2574556940061 932.4018449961712 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 Y{I|L} 1.1938 - 151 + 1 1.17 42636.2 1.0 8109 5485 13579 HBL1_DMSO_200M_050219_1,13596 HBL1_DMSO_200M_050219_1,13596,MLTADGDLYTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13597 68.276 425.0 717830.0 25 0 84491.0 + 21064 LPAEVRLV 8 153 448.781695706742 0 448.7819702029228 PEAK CID FTMS 0 0 0 13579 217379.25 0.1455032469012974 -1 0.0336227416992187 18 Unmodified _LPAEVRLV_ ENSG00000118420|ENST00000369747|UBE3D;ENST00000237186.10_1_6:83602743-83775466:-|nuORF;ENST00000505226.1_1_6:83748090-83767722:-|nuORF 43.85829265575387 0.1228905615125388 3 PAEV 4 4 29.029 0.0 0.0 3.2415 0.0 0.0 113.08268611942124 383.2422274225219 496.3249135419432 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.4247425010840047 0.0 + PAEV 3.2415 + + 44 + 1 1.17 232521.7 1.0 8110 5485 13579 HBL1_DMSO_200M_050219_1,13597 HBL1_DMSO_200M_050219_1,13597,LPAEVRLV True True LPAEVRLV 68.275632 448.781970202923 4836622.5 13579.0 ENSG00000118420|ENST00000369747|UBE3D;;ENST00000237186.10_1_6:83602743-83775466:-|nuORF;;ENST00000505226.1_1_6:83748090-83767722:-|nuORF 3.0481081902980804 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13598 68.282 330.0 293540.0 25 0 18353.0 13246 HIGHLGQCYSI 11 137 614.2985717654228 0 614.2985717654228 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _HIGHLGQCYSI_ ENST00000489826.1_1_3:49847513-49847846:-|nuORF 14.838274106304384 0.4055817375737379 3 ACMA 4 10 11.771 0.0 0.0 0.95966 0.0 0.0 213.03127259546403 634.3693007201756 847.4005733156396 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ACMA 0.95966 - 695 + 1 1.17 77558.8 1.0 8111 5485 13579 HBL1_DMSO_200M_050219_1,13598 HBL1_DMSO_200M_050219_1,13598,HIGHLGQCYSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13599 68.29 415.0 301420.0 25 0 32914.0 -1 0 163 467.25575046979367 466.2484740031937 1 467.2563964724541 MULTI CID FTMS 0 0 0 13579 181389.578125 0.3654455842749642 6 -0.229248046875 20 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L} 4 -1 + 31.942 0.0 0.0 6.8509 6.8509 88.365 0.0 0.0 0.0 11.554004937348347 14.23516269895728 11.554004937348347 7.347262044787978 0 0.0 0.744727494896694 0.1307196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L};[{M(Oxidation (M))|F}T]S{I|L};[{M(Oxidation (M))|F}T]TV;{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T];[{I|L}T]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[{M(Oxidation (M))|F}T]{[TV]|[{I|L}S]} 6.8509;5.275;3.6061;3.1;1.4331;0.41125 -;-;-;-;-;- 84 + 1 1.17 98156.6 1.0 8112 5485 13579 HBL1_DMSO_200M_050219_1,13599 HBL1_DMSO_200M_050219_1,13599, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13601 68.294 3.0 21420000.0 25 0 3151600.0 34277 SLQSQTEDTV 10 83 554.2616257128416 1106.508698492483 2 554.2626830935478 MULTI CID FTMS 0 0 0 13600 25085196.0 0.6506042882644405 1 -0.0396652221679687 1 Unmodified _SLQSQTEDTV_ ENST00000497953.5_3_3:52738772-52739516:-|nuORF 39.94969957227396 0.1580982266129622 3 {[QS]|[NT]}{I|L}SQP{I|L} 7 7 65.716 0.0 0.0 5.939 0.0 0.0 0.0 350.0863101470331 350.0863101470331 34.84382308670526 0.0 0.0 0.0 0 1.3807196863200843 0.7958800173440752 1.2530834337684311 0.872363747448347 {[QS]|[NT]}{I|L}SQP{I|L} 5.939 - 248 1 1.17 54027.0 1.0 8113 5486 13600 HBL1_DMSO_200M_050219_1,13601 HBL1_DMSO_200M_050219_1,13601,SLQSQTEDTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13602 68.295 8.9 5765900.0 25 0 1067700.0 + 25216 MVADRFSEL 9 65 534.2628789365131 1066.511204939826 2 534.2634765505791 MULTI CID FTMS 0 0 0 13600 6037493.5 0.3502418484203858 2 -0.0853195190429687 2 Unmodified _MVADRFSEL_ ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 26.268140514670165 0.1969607489560049 3 MVADQ 5 5 66.454 0.0 0.0 6.2309 0.0 0.0 0.0 519.2613009088499 519.2613009088499 53.35470640367888 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 MVADQ 6.2309 - 36 + 1 1.17 49454.9 1.0 8114 5486 13600 HBL1_DMSO_200M_050219_1,13602 HBL1_DMSO_200M_050219_1,13602,MVADRFSEL False True MVADRFSEL 68.295442 534.263476550579 191097008.0 13600.0 ENSG00000137713|ENST00000527614|PPP2R1B;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 6.155869960784912 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13603 68.297 14.0 20728000.0 25 0 2292100.0 42421 VTEMSYYL 8 100 503.2318295443582 1004.4491061555163 2 503.2321655154228 MULTI CID FTMS 0 0 0 13600 9161237.0 0.355992665365215 -29 2.283111572265625 3 Unmodified _VTEMSYYL_ L1ME1_dup14741|chr8:25510836-25512219:-|2.1947036737014773|0.2188578600898351|3.33|48.0|44|2|sense 19.438996006549623 0.6237395211498085 3 V{M(Oxidation (M))|F}V 3 6 39.041 0.0 0.0 3.8868 0.0 0.0 0.0 656.2377843560114 656.2377843560114 10.33682736786627 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 V{M(Oxidation (M))|F}V 3.8868 - 213 + 1 1.17 215042.9 1.0 8115 5486 13600 HBL1_DMSO_200M_050219_1,13603 HBL1_DMSO_200M_050219_1,13603,VTEMSYYL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 13604 68.298 7.2 4654200.0 25 0 330630.0 37720 TLQGWQCGV 9 69 496.2378532511517 990.4611535691032 2 496.2368652224541 MULTI CID FTMS 0 0 0 13600 8746330.0 0.9383615426613852 -2 0.1351089477539062 4 Unmodified _TLQGWQCGV_ ENST00000392557.8_1_14:105676521-105676869:-|nuORF 9.347437153973935 0.588369872918737 3 {[SA]|[TG]}Y[QP][TP]EV 9 7 {[SA]|[TG]}Y[QP][TP]E + + 13.495 -16.522 -1.8917 1.3625 1.3625 48.478 0.0 0.0 0.0 0.0 -0.3174312876055314 -0.3174312876055314 0.0 0 0.0 0.0 0.0 0.0 {[SA]|[TG]}Y[QP][TP]EV 1.3625 - 86 + 1 1.17 31118.7 1.0 8116 5486 13600 HBL1_DMSO_200M_050219_1,13604 HBL1_DMSO_200M_050219_1,13604,TLQGWQCGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13605 68.299 25.0 823720.0 25 0 67727.0 44409 YLYLTYWGT 9 42 590.2899131714199 1178.5652734096398 2 590.2902709841728 MULTI CID FTMS 0 0 0 13600 8217383.0 1.0 0 0.0 5 Unmodified _YLYLTYWGT_ ENSG00000084774|ENST00000264705|CAD 4.3292370932331545 0.7635526921153418 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.17 23765.3 1.0 8117 5486 13600 HBL1_DMSO_200M_050219_1,13605 HBL1_DMSO_200M_050219_1,13605,YLYLTYWGT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13606 68.3 8.9 8616500.0 25 0 1049300.0 + 3616 DADGHFHLI 9 108 512.7459398878867 1023.4773268425736 2 512.7462036013603 MULTI CID FTMS 0 0 0 13600 8041040.5 1.0 0 0.0 6 Unmodified _DADGHFHLI_ ENSG00000013375|ENST00000513973|PGM3;nc|ENSG00000013375|O95394-3|PGM3;nc|ENSG00000013375|O95394-4|PGM3 64.23631603340823 0.0237365939569086 3 DAD{[HG]|PP}{M(Oxidation (M))|F}H{I|L}{I|L} 9 0 + 76.551 0.0 0.0 7.4795 7.4795 94.984 0.0 0.0 0.0 33.18636235841012 12.587418566968154 12.587418566968154 20.36297847284061 0 1.75 2.0 0.0 0.0 + + DAD{[HG]|PP}{M(Oxidation (M))|F}H{I|L}{I|L};{[DA]|[EG]}D{[HG]|PP}{M(Oxidation (M))|F}H{I|L}{I|L};DW{[HG]|PP}{M(Oxidation (M))|F}H{I|L}{I|L};{[DA]|[EG]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}W{I|L}{I|L};DAHH{I|L}[MT]S{I|L};DA[{M(Oxidation (M))|F}V]{[ET]|[MV]}ET{I|L};DAHH{I|L}[MT]TV;{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}AD{I|L}{I|L};{[SA]|[TG]}[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}AD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}W{I|L}{I|L} 7.4795;5.4899;4.8924;3.9703;3.2784;3.2547;2.9842;2.3773;2.2227;2.2106 +;+;-;-;-;-;-;-;-;- + 699 + 1 1.17 64333.3 1.0 8118 5486 13600 HBL1_DMSO_200M_050219_1,13606 HBL1_DMSO_200M_050219_1,13606,DADGHFHLI True True DADGHFHLI 68.300156 512.74620360136 28195054.0 13600.0 ENSG00000013375|ENST00000513973|PGM3;;nc|ENSG00000013375|O95394-3|PGM3;;nc|ENSG00000013375|O95394-4|PGM3 6.654805660247803 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13607 68.301 30.0 1575800.0 25 0 133660.0 42357 VTDETDRGV 9 76 331.1608433786771 990.4607007362312 3 331.1604797244072 MULTI CID FTMS 0 0 0 13600 3689073.5 1.0 0 0.0 7 Unmodified _VTDETDRGV_ ENST00000472067.1_1_7:143000848-143002161:+|nuORF 4.75600775471527 0.7486543447549536 3 TVG 3 7 16.198 0.0 0.0 1.6354 0.0 0.0 134.05548753424847 596.2426851861936 730.2981727204422 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TVG 1.6354 - 155 + 1 1.17 44216.8 1.0 8119 5486 13600 HBL1_DMSO_200M_050219_1,13607 HBL1_DMSO_200M_050219_1,13607,VTDETDRGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13608 68.303 85.0 800080.0 25 0 63128.0 -1 0 80 653.328265767884 1956.962967903852 3 653.6625854372978 MULTI CID FTMS 0 0 0 13600 3555234.25 0.6230893186568517 -2 0.1351089477539062 8 3 VTN{I|L}{M(Oxidation (M))|F}[VG] 7 -1 28.438 0.0 0.0 1.4532 0.0 0.0 1208.5864553079518 0.0 1208.5864553079518 0.0 3.661516503251292 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.5941876774005248 VTN{I|L}{M(Oxidation (M))|F}[VG] 1.4532 - 964 + 1 1.17 57136.2 1.0 8120 5486 13600 HBL1_DMSO_200M_050219_1,13608 HBL1_DMSO_200M_050219_1,13608, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13609 68.304 16.0 1578100.0 25 0 104630.0 34214 SLPHRQYV 8 65 500.2709306780972 998.5273084229945 2 500.2715331912041 MULTI CID FTMS 0 0 0 13600 2920270.5 1.0 0 0.0 9 Unmodified _SLPHRQYV_ ENST00000324866.11_1_11:71806383-71806563:+|nuORF 10.183394434864962 0.7604730176254005 3 {NN|[MP]|[D{I|L}]|[EV]}PV 4 5 28.416 0.0 0.0 2.8458 0.0 0.0 0.0 571.2691656830131 571.2691656830131 15.652165235758597 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PV 2.8458 - 23 1 1.17 26557.6 1.0 8121 5486 13600 HBL1_DMSO_200M_050219_1,13609 HBL1_DMSO_200M_050219_1,13609,SLPHRQYV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13610 68.306 58.0 2824100.0 25 0 352100.0 + 38795 TVELYEDH 8 101 335.8238027891444 1004.4495789676332 3 335.8235961794853 MULTI CID FTMS 0 0 0 13600 2826718.75 0.3336653104287335 -6 0.4141845703125 10 Unmodified _TVELYEDH_ REV__ENSG00000166963|ENST00000300231|MAP1A;REV__nc|ENSG00000166963|P78559-2|MAP1A 13.50788311687929 0.7113601687236069 3 TVT 3 -1 33.5 0.0 0.0 3.3352 0.0 0.0 0.0 700.2643863524659 700.2643863524659 7.69377326076139 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 TVT 3.3352 - 601 + 1 1.17 132705.9 1.0 8122 5486 13600 HBL1_DMSO_200M_050219_1,13610 HBL1_DMSO_200M_050219_1,13610,TVELYEDH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13611 68.307 27.0 1594400.0 25 0 180770.0 + 41409 VPLDKQITI 9 83 513.8132827839034 1025.6120126346068 2 513.8138305544853 MULTI CID FTMS 0 0 0 13600 2607000.5 0.1743251588200857 -35 2.7184982299804688 11 Unmodified _VPLDKQITI_ ENSG00000163938|ENST00000418458|GNL3;nc|ENSG00000163938|Q9BVP2-2|GNL3 27.628801355627647 0.1796483985696185 3 VP{I|L} 3 6 43.43 0.0 0.0 4.2345 0.0 0.0 0.0 713.3858355340627 713.3858355340627 2.54931816864584 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 + VP{I|L} 4.2345 + + 264 + 1 1.17 39123.0 1.0 8123 5486 13600 HBL1_DMSO_200M_050219_1,13611 HBL1_DMSO_200M_050219_1,13611,VPLDKQITI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13612 68.308 37.0 2116900.0 25 0 249050.0 + 19645 LGGKRSHP 8 102 426.24605437218537 850.4775558111708 2 426.2466003298759 MULTI CID FTMS 0 0 0 13600 2378468.75 0.7182325509624171 -9 0.6922760009765625 12 Unmodified _LGGKRSHP_ REV__ENSG00000103043|ENST00000261776|VAC14;REV__ENST00000566655.1_1_16:70820075-70820303:-|nuORF 2.889219685676258 0.8067950007271085 3 P 1 -1 13.099 0.0 0.0 1.5402 0.0 0.0 735.4134058861692 0.0 735.4134058861692 0.0 3.969231194550812 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.5402 + + 37 + 1 1.17 67328.8 1.0 8124 5486 13600 HBL1_DMSO_200M_050219_1,13612 HBL1_DMSO_200M_050219_1,13612,LGGKRSHP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13613 68.309 20.0 1735100.0 25 0 198890.0 + 4426 DAVVSFAHV 9 60 472.7457456306517 943.4769383281034 2 472.7458373904228 MULTI CID FTMS 0 0 0 13600 2127163.0 0.7136265984182825 -2 0.1351089477539062 13 Unmodified _DAVVSFAHV_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 28.486842064014134 0.1687311288560894 3 {[DA]|[EG]}V 3 6 30.942 0.0 0.0 3.2796 0.0 0.0 0.0 655.3201749826534 655.3201749826534 17.296962438796154 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[DA]|[EG]}V 3.2796 + + 35 1 1.17 32024.5 1.0 8125 5486 13600 HBL1_DMSO_200M_050219_1,13613 HBL1_DMSO_200M_050219_1,13613,DAVVSFAHV False True DAVVSFAHV 68.309491 472.745837390423 40919840.0 13600.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 9.042678197224935 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13614 68.311 52.0 2314800.0 25 0 247620.0 -1 0 72 979.48690548717 1956.95925804114 2 979.9886352419852 MULTI CID FTMS 0 0 0 13600 1890155.875 0.5682323935950458 -4 0.2444076538085937 14 3 {[QS]|[NT]}VT{[ES]|[DT]|[{I|L}C]}VT 8 -1 36.032 0.0 0.0 1.8412 0.0 0.0 0.0 1122.5210005550653 1122.5210005550653 8.715234340851481 0.0 0.0 0.0 0 0.0 0.0 1.6338031200885157 1.055462187404089 {[QS]|[NT]}VT{[ES]|[DT]|[{I|L}C]}VT 1.8412 - 1731 1 1.17 86422.6 1.0 8126 5486 13600 HBL1_DMSO_200M_050219_1,13614 HBL1_DMSO_200M_050219_1,13614, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13615 68.312 65.0 2207600.0 25 0 339440.0 + 34426 SLVTNMAIT 9 125 475.2530741705133 0 475.2530700564384 PEAK CID FTMS 0 0 0 13600 1498021.75 0.7928221790636724 -9 0.6922760009765625 15 Unmodified _SLVTNMAIT_ REV__ENST00000507678.5_1_4:177241188-177241371:+|nuORF;REV__ENST00000513139.1_1_4:177241188-177248429:+|nuORF 96.28474662873226 0.0294763267963279 3 TN{I|L}CT 5 -1 54.188 0.0 0.0 5.713 0.0 0.0 299.18252665958295 114.05680261783436 413.2393292774173 0.0 0.0 0.0 0.0 0 1.8494850021680087 0.0 1.2856668758921828 0.805462187404089 TN{I|L}CT 5.713 - 737 + 1 1.17 110373.6 1.0 8127 5486 13600 HBL1_DMSO_200M_050219_1,13615 HBL1_DMSO_200M_050219_1,13615,SLVTNMAIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13616 68.316 181.0 976250.0 25 0 68336.0 -1 0 108 993.9636944498808 1985.9128359665613 2 994.4677001833916 MULTI CID FTMS 0 0 0 13600 1498371.5 0.7066270179621742 -2 0.1351089477539062 16 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R{[ES]|[DT]|[{I|L}C]}VVY 8 -1 39.742 0.0 0.0 2.0012 0.0 0.0 0.0 989.4085384414236 989.4085384414236 20.88396816829353 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.7742275032520141 0.2614393726401688 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R{[ES]|[DT]|[{I|L}C]}VVY 2.0012 - 5116 1 1.17 118799.1 1.0 8128 5486 13600 HBL1_DMSO_200M_050219_1,13616 HBL1_DMSO_200M_050219_1,13616, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13617 68.319 174.0 430370.0 25 0 32927.0 8015 EMRALNLYGV 10 98 583.3047655689543 1164.5949782047085 2 583.3047363162041 MULTI CID FTMS 0 0 0 13600 1158270.625 0.2637428468213604 -8 0.5665130615234375 17 Unmodified _EMRALNLYGV_ ENST00000341119.9_1_7:87479196-87479262:-|nuORF 18.1463463914782 0.5430639438673815 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L}V 8 5 31.19 0.0 0.0 2.6782 0.0 0.0 0.0 218.0666328280085 218.0666328280085 3.9086544143431823 0.0 0.0 0.0 0 0.0 0.958607314841775 0.8494850021680094 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L}V 2.6782 - 684 1 1.17 61710.5 1.0 8129 5486 13600 HBL1_DMSO_200M_050219_1,13617 HBL1_DMSO_200M_050219_1,13617,EMRALNLYGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13618 68.321 75.0 1343500.0 25 0 94923.0 + 9294 RVGDHMMFV 9 133 545.7740683929251 1089.53358385265 2 545.7740966677666 MULTI CID FTMS 0 0 0 13600 1167929.0 0.5150180658639231 12 -0.2124481201171875 18 Unmodified _FIDLFYSSV_ nc|ENSG00000167470|Q504T8|MIDN;ENSG00000167470|ENST00000682408|MIDN 21.74664581756881 0.2544899275067181 3 {[QN]|[E{I|L}]|[KN]}PTEEQ 7 8 33.788 0.0 0.0 3.1012 0.0 0.0 0.0 260.15044111266883 260.15044111266883 2.78315092069844 0.0 0.0 0.0 0 0.0 1.154901959985743 1.055462187404089 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}PTEEQ 3.1012 - 1395 1 1.17 80222.8 1.0 8130 5486 13600 HBL1_DMSO_200M_050219_1,13618 HBL1_DMSO_200M_050219_1,13618,FIDLFYSSV False False RVGDHMMFV 68.321137 545.774096667767 5330995.0 13600.0 nc|ENSG00000167470|Q504T8|MIDN;;ENSG00000167470|ENST00000682408|MIDN 6.1572346687316895 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13619 68.325 221.0 771400.0 25 0 61412.0 + 25024 MPRGKFLVV 9 154 349.5438964687468 0 349.5439941287041 PEAK CID FTMS 0 0 0 13600 1024482.375 1.0 0 0.0 19 Unmodified _MPRGKFLVV_ ENSG00000205413|ENST00000379958|SAMD9 14.40537977576856 0.2617374511876206 3 V 1 8 5.4846 0.0 0.0 0.7868 0.0 0.0 480.9246937169873 114.05684839420157 594.9815421111889 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.7868 + + 74 + 1 1.17 149160.9 1.0 8131 5486 13600 HBL1_DMSO_200M_050219_1,13619 HBL1_DMSO_200M_050219_1,13619,MPRGKFLVV False True MPRGKFLVV 68.325298 349.543994128704 3873418.0 13600.0 ENSG00000205413|ENST00000379958|SAMD9 3.663684527079264 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13620 68.33 245.0 329580.0 25 0 44949.0 -1 0 72 1121.0719583949435 0 1121.073413074017 PEAK CID FTMS 0 0 0 13600 928398.3125 1.0 0 0.0 20 3 VTVTN{I|L} 6 -1 46.675 0.0 0.0 2.0836 0.0 0.0 1291.636029971725 318.1107271783813 1609.7467571501063 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.9247425010840048 VTVTN{I|L} 2.0836 - 2041 + 1 1.17 57192.9 1.0 8132 5486 13600 HBL1_DMSO_200M_050219_1,13620 HBL1_DMSO_200M_050219_1,13620, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13622 68.334 6.9 10508000.0 25 0 1298700.0 + 21908 LPPHIIRL 8 68 320.21154587615865 957.612808228676 3 320.2113220095634 MULTI CID FTMS 0 0 0 13621 6693302.0 0.3686775181747116 13 -0.1996307373046875 1 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 29.081581746732265 0.4323690340403521 3 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 0 + 72.115 0.0 0.0 7.5308 7.5308 90.097 0.0 0.0 0.0 61.14638779968488 8.226825097560422 8.226825097560422 7.257724967479859 0 0.4247425010840047 1.6989700043360187 0.0 0.2742275032520141 + + {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 7.5308;6.7729;6.4585;4.37 +;-;-;- + 81 + 1 1.154 63343.5 1.0 8133 5487 13621 HBL1_DMSO_200M_050219_1,13622 HBL1_DMSO_200M_050219_1,13622,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13623 68.335 8.3 7510500.0 25 0 740540.0 -1 0 81 479.2843890451582 478.2771125785582 1 479.2856323122978 MULTI CID FTMS 0 0 0 13621 2312736.25 0.1457693392517518 6 -0.1008682250976562 2 3 [{M(Oxidation (M))|F}V]T{I|L} 4 -1 + 22.677 0.0 0.0 4.7415 4.7415 79.764 0.0 0.0 0.0 3.6092437480817807 8.31878761990978 3.6092437480817807 5.625918950875501 0 0.0 0.0 0.25 0.0 [{M(Oxidation (M))|F}V]T{I|L};[{I|L}T][{M(Oxidation (M))|F}V] 4.7415;3.5652 -;- 72 + 1 1.154 51818.9 1.0 8134 5487 13621 HBL1_DMSO_200M_050219_1,13623 HBL1_DMSO_200M_050219_1,13623, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13624 68.336 14.0 2730400.0 25 0 235450.0 + -1 RAAEEFVNI 9 58 524.7749252288304 1047.5352975244607 2 524.7750732302666 MULTI CID FTMS 0 0 0 13621 3273396.75 0.6789468100419681 1 -0.045654296875 3 Carbamidomethyl (C) _VQMC(Carbamidomethyl (C))KRNL_ nc|ENSG00000101888|Q9NPJ8-3|NXT2;ENSG00000101888|ENST00000372106|NXT2;chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2 19.438996006549623 0.6237395211498085 3 {NN|[MP]|[D{I|L}]|[EV]}[QA]E{M(Oxidation (M))|F}VN{I|L} 9 -1 + 46.929 0.0 0.0 4.4799 4.4799 82.637 0.0 0.0 0.0 7.732646631054152 32.94917177197476 7.732646631054152 9.208187539523747 0 0.4247425010840047 0.0 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}[QA]E{M(Oxidation (M))|F}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QA]E{M(Oxidation (M))|F}VGG{I|L} 4.4799;3.6009 -;- 34 1 1.154 36810.5 1.0 8135 5487 13621 HBL1_DMSO_200M_050219_1,13624 HBL1_DMSO_200M_050219_1,13624,VQMCKRNL False False RAAEEFVNI 68.336283 522.763 41495576.0 13621.0 nc|ENSG00000101888|Q9NPJ8-3|NXT2;;ENSG00000101888|ENST00000372106|NXT2;;chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2 5.289158821105957 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13625 68.337 31.0 2332700.0 25 0 190630.0 + 21544 LPIVTPALR 9 80 490.31826747417495 978.62198201515 2 490.3183471560478 MULTI CID FTMS 0 0 0 13621 2848309.0 0.3848552902470981 -20 1.4681015014648438 4 Unmodified _LPIVTPALR_ ENSG00000182481|ENST00000330459|KPNA2 39.94969957227396 0.0757326808254658 3 {I|L}P{I|L}VT 5 4 69.706 0.0 0.0 7.1229 0.0 0.0 0.0 452.2636858401863 452.2636858401863 50.70993063545643 0.0 0.0 0.0 0 1.174742501084005 2.0 0.0 0.0 + {I|L}P{I|L}VT 7.1229 + + 161 + 1 1.154 61660.2 1.0 8136 5487 13621 HBL1_DMSO_200M_050219_1,13625 HBL1_DMSO_200M_050219_1,13625,LPIVTPALR True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13626 68.34 144.0 907300.0 25 0 81167.0 + 3062 AVLPEMENQV 10 142 565.2819386909483 0 565.2819702029228 PEAK CID FTMS 0 0 0 13621 1318779.25 0.2045749387723697 4 -0.0880966186523437 5 Unmodified _AVLPEMENQV_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 47.74868867922204 0.0612993202955131 3 {I|L}D{I|L}{M(Oxidation (M))|F}QDG 7 8 37.931 0.0 0.0 3.361 0.0 0.0 170.11299739967154 167.08318506412346 337.196182463795 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 1.5994850021680094 {I|L}D{I|L}{M(Oxidation (M))|F}QDG 3.361 - 930 + 1 1.154 105442.6 1.0 8137 5487 13621 HBL1_DMSO_200M_050219_1,13626 HBL1_DMSO_200M_050219_1,13626,AVLPEMENQV True True AVLPEMENQV 68.340364 565.281970202923 56498016.0 13621.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 3.932149092356364 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13627 68.342 83.0 1225900.0 25 0 117020.0 + 11498 VALLVGEKV 9 125 464.297315662682 926.580078392164 2 464.2974731326103 MULTI CID FTMS 0 0 0 13621 913660.0 0.2846461095324871 2 -0.0627822875976562 6 Unmodified _GILIVVNTV_ ENST00000461762.5_1_9:132595912-132596119:-|nuORF;ENSG00000136819|ENST00000372447|C9orf78 43.9818466556824 0.0535980856389242 3 VA{I|L}{I|L}VVQSV 9 4 + 80.838 0.0 0.0 8.7243 8.7243 87.769 0.0 0.0 0.0 30.201812293369848 14.923612212764 14.923612212764 3.351066604557488 0 1.424742501084005 1.5228787452803376 0.6861818737241735 0.0 VA{I|L}{I|L}VVQSV;VA{I|L}{I|L}V{[DA]|[EG]}KV;VA{I|L}{I|L}VV[AG]SV;VA{I|L}{I|L}VV[NS]{I|L} 8.7243;8.3627;7.7306;7.1137 -;-;-;- 444 + 1 1.154 80119.4 1.0 8138 5487 13621 HBL1_DMSO_200M_050219_1,13627 HBL1_DMSO_200M_050219_1,13627,GILIVVNTV True False VALLVGEKV 68.342227 464.29747313261 58127724.0 13621.0 ENST00000461762.5_1_9:132595912-132596119:-|nuORF;;ENSG00000136819|ENST00000372447|C9orf78 5.225854714711507 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13628 68.346 219.0 451560.0 25 0 44583.0 + 45881 YYRDYPTLV 9 139 595.2983236169216 1188.5820943006431 2 595.2985717654228 MULTI CID FTMS 0 0 0 13621 532553.625 0.8016188435968629 1 -0.045654296875 7 Unmodified _YYRDYPTLV_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87355723-87398314:+|nuORF 55.50274090549119 0.0285720310785888 3 YPT{I|L}V 5 4 40.222 0.0 0.0 3.384 0.0 0.0 597.2558243376134 0.0 597.2558243376134 0.0 7.034021960761265 0.0 0.0 0 0.5 0.0 0.805462187404089 0.0 + YPT{I|L}V 3.384 + + 542 1 1.154 76432.4 1.0 8139 5487 13621 HBL1_DMSO_200M_050219_1,13628 HBL1_DMSO_200M_050219_1,13628,YYRDYPTLV True True YYRDYPTLV 68.346385 595.298571765423 11761495.0 13621.0 ENST00000454465.1_1_2:87355723-87398314:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 6.223167101542155 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13629 68.351 251.0 875750.0 25 0 95754.0 + 22435 LPTMPPVSP 9 167 469.7543088661768 937.4940647991536 2 469.7543212771416 MULTI CID FTMS 0 0 0 13621 486251.28125 0.2707802027198651 -22 1.6680145263671875 8 Unmodified _LPTMPPVSP_ REV__ENSG00000244462|ENST00000374114|RBM12 97.07464715276576 0.0121042244793311 3 {[TV]|[{I|L}S]}TPPN{I|L} 7 -1 67.375 0.0 0.0 7.1868 0.0 0.0 0.0 212.06379671474352 212.06379671474352 34.07683284208422 0.0 0.0 0.0 0 1.4876954943324543 2.0 1.4332070678992466 0.3252574989159953 {[TV]|[{I|L}S]}TPPN{I|L} 7.1868 - 2588 1 1.154 168686.8 1.0 8140 5487 13621 HBL1_DMSO_200M_050219_1,13629 HBL1_DMSO_200M_050219_1,13629,LPTMPPVSP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13630 68.356 276.0 605090.0 25 0 52347.0 + 4231 DAPKSFTF 8 161 456.7264459730012 911.4383390128024 2 457.2284423708916 MULTI CID FTMS 0 0 0 13621 413865.625 0.840723582056201 1 -0.045654296875 9 Unmodified _DAPKSFTF_ ENSG00000129250|ENST00000320785|KIF1C 24.67388899826682 0.525179942228231 3 {[DA]|[EG]}{[WT]|[RM]}{I|L}SV 7 6 31.713 0.0 0.0 3.4794 0.0 0.0 0.0 136.0408877008422 136.0408877008422 12.795248280194986 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.8494850021680094 0.0 {[DA]|[EG]}{[WT]|[RM]}{I|L}SV 3.4794 - 526 + 1 1.154 130767.3 1.0 8141 5487 13621 HBL1_DMSO_200M_050219_1,13630 HBL1_DMSO_200M_050219_1,13630,DAPKSFTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13631 68.362 307.0 500200.0 25 0 73172.0 + 41389 KVGPVPVL 8 143 404.7682930862987 807.5220332393974 2 404.7684203982353 MULTI CID FTMS 0 0 0 13621 418681.53125 0.0443757325843003 10 -0.1618194580078125 10 Unmodified _VPKVPGVL_ ENSG00000106803|ENST00000223641|SEC61B 34.18733598223924 0.3315367612694167 3 [VP]KGVPV{I|L} 8 2 + 69.281 0.0 0.0 8.5795 8.5795 83.796 0.0 0.0 0.0 16.980949604492558 14.948500216800936 14.948500216800936 1.1263423094075478 0 0.8807196863200843 1.6989700043360187 0.0 0.6139829889124311 [VP]KGVPV{I|L};[VP]GVKPV{I|L};[VP]GKVPV{I|L};[VP]GVPKV{I|L};[{I|L}P]AAKPV{I|L};[VP]GPVKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PGVPV{I|L};[KP]VGVPV{I|L};[PG]VVKPV{I|L};[VP]GVPVK{I|L} 8.5795;8.44;8.2219;6.5524;6.4766;6.1797;5.654;5.6449;5.5472;5.4901 -;-;-;-;-;-;-;-;-;- 410 1 1.154 120638.1 1.0 8142 5487 13621 HBL1_DMSO_200M_050219_1,13631 HBL1_DMSO_200M_050219_1,13631,VPKVPGVL False False KVGPVPVL 68.361725 404.768420398235 77558416.0 13621.0 ENSG00000106803|ENST00000223641|SEC61B 4.57372538248698 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13632 68.366 237.0 273060.0 25 0 14161.0 -1 SVLACSIFSY 10 125 573.7765641273631 1145.5385753215262 2 574.2794067263603 MULTI CID FTMS 0 0 0 13621 395789.0625 0.8876134637056308 1 -0.045654296875 11 Carbamidomethyl (C) _SVLAC(Carbamidomethyl (C))SIFSY_ ENST00000401959.5_1_22:42070830-42070932:-|nuORF 10.823927491677226 0.6659270209832991 3 TV 2 -1 13.823 0.0 0.0 1.2067 0.0 0.0 927.411055645548 0.0 927.411055645548 0.0 -0.0553888120837271 -0.0553888120837271 0.0 0 0.0 0.0 0.2396518287104437 0.0 TV 1.2067 - 589 + 1 1.154 55728.8 1.0 8143 5487 13621 HBL1_DMSO_200M_050219_1,13632 HBL1_DMSO_200M_050219_1,13632,SVLACSIFSY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13633 68.371 241.0 328550.0 25 0 25749.0 + 42815 VVLDDVELREA 11 96 629.3381213165547 1256.6616896999094 2 629.8368408083916 MULTI CID FTMS 0 0 0 13621 367060.53125 0.3988978121971148 2 -0.0627822875976562 12 Unmodified _VVLDDVELREA_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 17.86316937532769 0.6635724014218961 3 VV{I|L}DDVEQ{I|L}D{I|L} 11 4 + 62.759 0.0 0.0 4.9941 4.9941 83.53 0.0 0.0 0.0 32.410488013318634 13.921689698196396 13.921689698196396 9.128498242810998 0 0.4247425010840047 2.0 0.7302046884880937 0.0 VV{I|L}DDVEQ{I|L}D{I|L};VV{I|L}DDVE[AG]{I|L}D{I|L};VV{I|L}N{[QS]|[NT]}EQ{I|L}D{I|L};VV{I|L}N{[QS]|[NT]}E[AG]{I|L}D{I|L};VV{I|L}GG{[QS]|[NT]}EQ{I|L}D{I|L};VV[HA]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EQ{I|L}D{I|L};VV{I|L}DD[RK]{[C(Carbamidomethyl (C))G]|[NC]}[VP];VV{I|L}DD{[CT]|[{M(Oxidation (M))|F}G]}V[TP][VP];VV{I|L}DD{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[PS][VP];VV{I|L}N{M(Oxidation (M))|F}[RP]{[C(Carbamidomethyl (C))G]|[NC]}[VP] 4.9941;4.2677;3.9811;3.2547;3.2547;2.5884;1.8531;1.7769;1.6606;1.4734 -;-;-;-;-;-;-;-;-;- 2672 + 1 1.154 64936.3 1.0 8144 5487 13621 HBL1_DMSO_200M_050219_1,13633 HBL1_DMSO_200M_050219_1,13633,VVLDDVELREA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13634 68.376 264.0 482550.0 25 0 46284.0 -1 0 158 479.2843890451582 478.2771125785582 1 481.7617980837822 MULTI CID FTMS 0 0 0 13621 94922.7734375 0.137551793703697 2 -0.0627822875976562 13 3 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F} 4 -1 + 26.952 0.0 0.0 5.6352 5.6352 84.281 0.0 0.0 0.0 6.1056937719293565 9.755152062519649 6.1056937719293565 7.103676296434472 0 0.0 1.3010299956639813 0.2215141619232908 0.0 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F};[{I|L}T]V{M(Oxidation (M))|F};[Y{I|L}]A{I|L};{I|L}{I|L}AY;[{I|L}A]{I|L}Y 5.6352;4.1499;3.8506;1.3329;0.51265 -;-;-;-;- 170 1 1.154 100197.0 1.0 8145 5487 13621 HBL1_DMSO_200M_050219_1,13634 HBL1_DMSO_200M_050219_1,13634, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13636 68.38 8.3 3713900.0 25 0 158760.0 + 15584 IPYPLSENNQV 11 66 637.3245343686755 1272.6345158041509 2 637.3248168826103 MULTI CID FTMS 0 0 0 13635 5333297.5 0.4418453591054626 -14 1.0188140869140625 1 Unmodified _IPYPLSENNQV_ ENSG00000104549|ENST00000265896|SQLE 81.89019881105858 0.0062508977670184 3 [{I|L}P]YP{I|L}SENNQV 11 0 + 86.641 0.0 0.0 6.808 6.808 87.744 0.0 0.0 0.0 6.815758250686528 7.852135717294473 6.815758250686528 6.815758250686528 0 0.4386218330464625 1.5228787452803376 1.305462187404089 0.5 + + [{I|L}P]YP{I|L}SENNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENNQV;[{I|L}P]{M(Oxidation (M))|F}{I|L}{I|L}SENNQV;[{I|L}P]YPS{I|L}ENNQV;[{I|L}P]YP{I|L}SEGGNQV;[{I|L}P]YP{I|L}SENGGQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}{I|L}SENNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PS{I|L}ENNQV;[{I|L}P]{M(Oxidation (M))|F}{I|L}S{I|L}ENNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENGGQV 6.808;6.2725;6.2588;6.1966;6.0907;6.0907;5.7232;5.661;5.6473;5.5552 +;-;-;-;-;-;-;-;-;- + 610 1 1.154 30288.5 1.0 8146 5488 13635 HBL1_DMSO_200M_050219_1,13636 HBL1_DMSO_200M_050219_1,13636,IPYPLSENNQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13637 68.381 21.0 2308900.0 25 0 141950.0 + 25247 MVPEDVPRL 9 68 528.281209786704 0 528.2808105349541 PEAK CID FTMS 0 0 0 13635 1936775.625 0.9318115309519832 2 -0.0372543334960937 2 Unmodified _MVPEDVPRL_ ENSG00000272333|ENST00000420124|KMT2B 22.736283301280096 0.1762661025464585 3 {I|L}DVG{I|L} 5 6 20.802 0.0 0.0 1.9726 0.0 0.0 170.03707670055798 384.2012117975219 554.2382884980799 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DVG{I|L} 1.9726 - 161 + 1 1.154 46619.8 1.0 8147 5488 13635 HBL1_DMSO_200M_050219_1,13637 HBL1_DMSO_200M_050219_1,13637,MVPEDVPRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13638 68.382 7.1 4254600.0 25 0 324820.0 -1 TVHCSACSV 9 73 510.7152039071692 1019.4158548811384 2 511.2173339724541 MULTI CID FTMS 0 0 0 13635 8767515.0 1.0 0 0.0 3 2 Carbamidomethyl (C) _TVHC(Carbamidomethyl (C))SAC(Carbamidomethyl (C))SV_ ENSG00000162664|ENST00000340281|ZNF326;ENST00000394583.7_1_1:90470639-90493257:+|nuORF;nc|ENSG00000162664|Q5BKZ1-3|ZNF326 8.593279151180031 0.6146971463335029 3 TV 2 -1 17.474 0.0 0.0 1.7141 0.0 0.0 801.2884420166838 0.0 801.2884420166838 0.0 6.677353201839438 0.0 0.0 0 0.0 0.0 0.5 0.0 TV 1.7141 + + 42 + 1 1.154 30075.6 1.0 8148 5488 13635 HBL1_DMSO_200M_050219_1,13638 HBL1_DMSO_200M_050219_1,13638,TVHCSACSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13639 68.383 39.0 4540100.0 25 0 278920.0 -1 0 92 986.4824662994824 1970.9503796657648 2 986.9870483279228 MULTI CID FTMS 0 0 0 13635 2277047.5 0.1025139248553039 -2 0.0853195190429687 4 3 {[QS]|[NT]}{I|L}[YG]TVT 8 -1 28.857 0.0 0.0 1.4641 0.0 0.0 0.0 1118.5044533364585 1118.5044533364585 7.481676170840235 0.0 0.0 0.0 0 0.0 0.0 1.8494850021680087 0.3494850021680094 {[QS]|[NT]}{I|L}[YG]TVT 1.4641 - 1627 1 1.154 116403.3 1.0 8149 5488 13635 HBL1_DMSO_200M_050219_1,13639 HBL1_DMSO_200M_050219_1,13639, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13640 68.384 12.0 6516700.0 25 0 647380.0 + 21910 LPPHIIRL 8 101 479.8137852337753 957.6130175343508 2 479.8159973025322 MULTI CID FTMS 0 0 0 13635 1954096.125 0.3396946974597336 14 -0.18560791015625 5 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 36.12702656103203 0.299085846329477 3 {I|L}PPH{I|L}{I|L}R{I|L} 8 0 + 71.592 0.0 0.0 7.4761 7.4761 88.707 0.0 0.0 0.0 55.56093158795967 12.880325230808154 12.880325230808154 6.020599913279625 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPH{I|L}{I|L}R{I|L};{I|L}PP{I|L}H{I|L}R{I|L};{I|L}P{I|L}PH{I|L}R{I|L};{I|L}{I|L}PPH{I|L}R{I|L};{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}R{I|L} 7.4761;6.8473;6.533;3.6866;2.9859 +;-;-;-;- + 268 + 1 1.154 67088.5 1.0 8150 5488 13635 HBL1_DMSO_200M_050219_1,13640 HBL1_DMSO_200M_050219_1,13640,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13641 68.386 59.0 1507500.0 25 0 112570.0 -1 DACEQQAVT 9 116 341.1481865772767 1020.42273033203 3 341.1485168337822 MULTI CID FTMS 0 0 0 13635 872989.75 0.8059115180924875 -11 0.7775955200195312 6 Carbamidomethyl (C) _DAC(Carbamidomethyl (C))EQQAVT_ ENST00000451621.2_1_14:106743549-106744185:-|nuORF 8.155526934196011 0.6299788542272896 3 TV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4 -1 13.188 0.0 0.0 1.2924 0.0 0.0 558.1538600844129 0.0 558.1538600844129 0.0 1.767604344418121 0.0 0.0 0 0.0 0.0 0.0 0.0 TV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.2924 - 34 1 1.154 74740.4 1.0 8151 5488 13635 HBL1_DMSO_200M_050219_1,13641 HBL1_DMSO_200M_050219_1,13641,DACEQQAVT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13642 68.389 163.0 328250.0 25 0 13471.0 -1 0 96 662.978496672816 1985.913660618648 3 663.3121215701103 MULTI CID FTMS 0 0 0 13635 799189.3125 1.0 0 0.0 7 3 C{[TV]|[{I|L}S]} 3 -1 13.512 0.0 0.0 0.6804 0.0 0.0 1664.7802750815667 0.0 1664.7802750815667 0.0 4.5450149073900175 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 C{[TV]|[{I|L}S]} 0.6804 - 697 + 1 1.154 45714.7 1.0 8152 5488 13635 HBL1_DMSO_200M_050219_1,13642 HBL1_DMSO_200M_050219_1,13642, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13643 68.393 192.0 859490.0 25 0 69702.0 20362 LLGHHVGPV 9 167 464.7697386076133 927.5249242820264 2 464.7704345583916 MULTI CID FTMS 0 0 0 13635 616514.0 0.4055754670241 14 -0.18560791015625 8 Unmodified _LLGHHVGPV_ ENST00000366971.8_1_1:213032234-213037122:+|nuORF 14.581692164780916 0.4419739649577144 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}V{[DA]|[EG]}KV 8 6 + 28.722 0.0 0.0 3.0966 3.0966 68.174 0.0 0.0 0.0 9.301871722990676 3.448434684565811 3.448434684565811 0.6333450133152674 0 0.3054621874040891 0.0 0.3252574989159953 0.2059771852360797 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}V{[DA]|[EG]}KV;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}VN{I|L}SV;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{[RE]|[WV]}KV 3.0966;3.0283;2.0548 -;-;- 482 + 1 1.154 128715.2 1.0 8153 5488 13635 HBL1_DMSO_200M_050219_1,13643 HBL1_DMSO_200M_050219_1,13643,LLGHHVGPV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13645 68.398 186.0 194040.0 25 0 17912.0 -1 VTFWAMFCF 9 83 604.7662199111543 1207.5178868891085 2 605.2692138552666 MULTI CID FTMS 0 0 0 13644 197885.40625 0.4485038169690697 2 -0.0253143310546875 1 Carbamidomethyl (C) _VTFWAMFC(Carbamidomethyl (C))F_ ENST00000392845.7_1_3:155560378-155571161:-|nuORF 7.910154910731844 0.6385446671287552 3 {[TV]|[{I|L}S]}S 3 -1 28.557 0.0 0.0 2.3649 0.0 0.0 0.0 917.3459563073304 917.3459563073304 13.863781092484686 0.0 0.0 0.0 0 0.0 2.0 0.2614393726401688 0.0 {[TV]|[{I|L}S]}S 2.3649 - 80 1 1.154 29757.9 1.0 8154 5489 13644 HBL1_DMSO_200M_050219_1,13645 HBL1_DMSO_200M_050219_1,13645,VTFWAMFCF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13646 68.402 193.0 251370.0 25 0 19162.0 + 43716 YDAFCFIEPNI 11 96 666.3029569869163 1330.5913610406326 2 666.3029052615166 MULTI CID FTMS 0 0 0 13644 210224.375 0.2861700647832214 -6 0.3187332153320312 2 Unmodified _YDAFCFIEPNI_ REV__ENSG00000125107|ENST00000317147|CNOT1;REV__nc|ENSG00000125107|A5YKK6-2|CNOT1;REV__nc|ENSG00000125107|A5YKK6-3|CNOT1;REV__nc|ENSG00000125107|A5YKK6-4|CNOT1 22.736283301280096 0.5583477779825423 3 [WR]QEE{I|L}{I|L} 7 -1 31.955 0.0 0.0 2.4016 0.0 0.0 0.0 373.0650728815063 373.0650728815063 14.948500216800934 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [WR]QEE{I|L}{I|L} 2.4016 - 334 + 1 1.154 43031.0 1.0 8155 5489 13644 HBL1_DMSO_200M_050219_1,13646 HBL1_DMSO_200M_050219_1,13646,YDAFCFIEPNI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13647 68.405 174.0 757440.0 25 0 60713.0 + 28146 PPPSGENNTV 10 176 506.2408775456666 1010.4672021581332 2 506.2402831912041 MULTI CID FTMS 0 0 0 13644 565011.5 0.8102789319486211 3 -0.0328903198242187 3 Unmodified _PPPSGENNTV_ REV__ENSG00000156304|ENST00000286835|SCAF4;REV__ENST00000485790.1_1_21:33073145-33104086:-|nuORF;REV__nc|ENSG00000156304|O95104-2|SCAF4;REV__nc|ENSG00000156304|O95104-3|SCAF4 13.90604991867851 0.6142120002215601 3 NS{I|L} 3 -1 19.041 0.0 0.0 1.8844 0.0 0.0 678.298636339577 0.0 678.298636339577 0.0 5.942124970647033 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 NS{I|L} 1.8844 - 1224 + 1 1.154 100058.3 1.0 8156 5489 13644 HBL1_DMSO_200M_050219_1,13647 HBL1_DMSO_200M_050219_1,13647,PPPSGENNTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13648 68.409 194.0 763310.0 25 0 66472.0 + 3630 DADYAIKI 8 142 454.739735521762 907.464918110324 2 454.7399169802666 MULTI CID FTMS 0 0 0 13644 498550.6875 0.0267988210093866 12 -0.1567459106445312 4 Unmodified _DADYAIKI_ ENSG00000143368|ENST00000271628|SF3B4;ENST00000553618.1_1_14:67665960-67666731:+|nuORF 61.357469665136826 0.1155423183535659 3 {[DA]|[EG]}DYA{I|L}K{I|L} 8 0 + 76.028 0.0 0.0 8.3781 8.3781 90.85 0.0 0.0 0.0 23.098943791441968 6.53212513775344 6.53212513775344 6.53212513775344 0 1.579689690656103 2.0 0.0 0.2887254899964357 + + {[DA]|[EG]}DYA{I|L}K{I|L};{[DA]|[EG]}DYA{I|L}{I|L}K;W[{M(Oxidation (M))|F}V]C{I|L}K{I|L};W[{M(Oxidation (M))|F}V]C{I|L}{I|L}K;{[DA]|[EG]}[KA][RH][NP];W[{M(Oxidation (M))|F}V][K{I|L}]C{I|L} 8.3781;7.6583;3.8886;3.1688;0.96728;0.62146 +;-;-;-;-;- + 362 + 1 1.154 116705.8 1.0 8157 5489 13644 HBL1_DMSO_200M_050219_1,13648 HBL1_DMSO_200M_050219_1,13648,DADYAIKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13649 68.413 206.0 846860.0 25 0 52633.0 27580 PLDASPRR 8 174 456.2569667334189 0 456.2563354372978 PEAK CID FTMS 0 0 0 13644 393072.5625 0.1914461003680334 12 -0.1567459106445312 5 Unmodified _PLDASPRR_ ENSG00000149782|ENST00000279230|PLCB3;nc|ENSG00000149782|Q01970-2|PLCB3 13.50788311687929 0.5021269579892848 3 P[R{M(Oxidation (M))|F}]SV 5 6 20.744 0.0 0.0 2.2783 0.0 0.0 185.12266899060305 136.0410097711547 321.1636787617577 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 1.305462187404089 0.0 P[R{M(Oxidation (M))|F}]SV 2.2783 - 112 + 1 1.154 136251.1 1.0 8158 5489 13644 HBL1_DMSO_200M_050219_1,13649 HBL1_DMSO_200M_050219_1,13649,PLDASPRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13651 68.417 4.8 9722500.0 25 0 1372400.0 22455 LPVAQVIF 8 70 443.7734746181057 885.5323963030114 2 443.7736694216728 MULTI CID FTMS 0 0 0 13650 10306942.0 0.3375795602565056 4 -0.0301361083984375 1 Unmodified _LPVAQVIF_ ENST00000254322.2_1_19:14625909-14626227:-|nuORF 24.67388899826682 0.525179942228231 3 {I|L}P 2 6 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3747294739992 672.3747294739992 19.44286924608497 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 228 + 1 1.119 42095.7 1.0 8159 5490 13650 HBL1_DMSO_200M_050219_1,13651 HBL1_DMSO_200M_050219_1,13651,LPVAQVIF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13652 68.418 7.4 4253800.0 25 0 747250.0 + 43600 YAFNMKATV 9 57 522.7625554766594 1043.5105580201189 2 522.7629272341728 MULTI CID FTMS 0 0 0 13650 6095205.0 0.0995885651925505 6 -0.0683822631835937 2 Unmodified _YAFNMKATV_ ENSG00000109971|ENST00000534624|HSPA8 21.53697664764585 0.2571576504437394 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM[KA]TV 9 0 + 43.367 0.0 0.0 4.1559 4.1559 81.688 0.0 0.0 0.0 31.148569414238096 1.6723569505946756 1.6723569505946756 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM[KA]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GGM[KA]TV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QW[HV]{[ES]|[DT]|[{I|L}C]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[AG]W[HV]{[ES]|[DT]|[{I|L}C]} 4.1559;3.2735;1.0887;0.20108 +;-;-;- + 62 + 1 1.119 33054.8 1.0 8160 5490 13650 HBL1_DMSO_200M_050219_1,13652 HBL1_DMSO_200M_050219_1,13652,YAFNMKATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13654 68.422 2.8 10023000.0 25 0 636600.0 12448 GTYELNPPV 9 76 495.2491249830096 0 495.2493774294853 PEAK CID FTMS 0 0 0 13653 2470487.25 0.3241874832935308 5 -0.0631942749023437 1 Unmodified _GTYELNPPV_ ENST00000519699.1_1_8:8999160-9009036:-|nuORF 13.90604991867851 0.2674652324371145 3 C{I|L} 2 8 15.261 0.0 0.0 1.5439 0.0 0.0 218.12915709316923 551.2431124322874 769.3722695254567 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 C{I|L} 1.5439 - 25 + 1 1.119 28876.4 1.0 8161 5491 13653 HBL1_DMSO_200M_050219_1,13654 HBL1_DMSO_200M_050219_1,13654,GTYELNPPV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13655 68.423 11.0 2990500.0 25 0 291350.0 -1 FFHSLMVI 8 62 518.2680091404494 1034.5214653476987 2 518.2678100466728 MULTI CID FTMS 0 0 0 13653 3284351.25 0.2899212856086601 5 -0.0631942749023437 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))FFHSLMVI_ ENST00000296464.8_1_4:128732609-128732648:+|nuORF 26.34127834903884 0.4900704351052977 3 TV{I|L} 3 -1 30.177 0.0 0.0 2.917 0.0 0.0 703.3110829084 0.0 703.3110829084 0.0 14.69273760456403 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 TV{I|L} 2.917 - 73 1 1.119 32217.4 1.0 8162 5491 13653 HBL1_DMSO_200M_050219_1,13655 HBL1_DMSO_200M_050219_1,13655,FFHSLMVI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13656 68.424 19.0 1645400.0 25 0 77731.0 -1 0 50 873.9143878058196 1745.8142226784391 2 873.9161865115166 MULTI CID FTMS 0 0 0 13653 1556891.25 0.1229706743031234 7 -0.084686279296875 3 3 [MN][NP]{I|L}NE 7 -1 41.527 0.0 0.0 2.3787 0.0 0.0 0.0 930.444853569676 930.444853569676 23.066680086701883 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.4247425010840047 [MN][NP]{I|L}NE 2.3787 - 79 + 1 1.119 29738.9 1.0 8163 5491 13653 HBL1_DMSO_200M_050219_1,13656 HBL1_DMSO_200M_050219_1,13656, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13657 68.426 27.0 869260.0 25 0 142440.0 + 39203 TYSEFAREL 9 49 558.2720067651649 0 558.2721435427666 PEAK CID FTMS 0 0 0 13653 1033293.875 0.1447979490502421 7 -0.084686279296875 4 Unmodified _TYSEFAREL_ nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1 8.745405648335112 0.3266626568796316 3 SE 2 7 15.217 0.0 0.0 1.3653 0.0 0.0 264.1077581469255 631.322508281945 895.4302664288705 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + SE 1.3653 + + 6 + 1 1.119 24907.1 1.0 8164 5491 13653 HBL1_DMSO_200M_050219_1,13657 HBL1_DMSO_200M_050219_1,13657,TYSEFAREL False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13659 68.43 0.19 148810000.0 25 0 20885000.0 + 23292 LSYSQAVTV 9 54 484.25839615362605 966.502239374052 2 484.2587768435478 MULTI CID FTMS 0 0 0 13658 255523744.0 0.603772764583942 -3 0.0328903198242187 1 Unmodified _LSYSQAVTV_ REV__ENSG00000115145|ENST00000263904|STAM2 15.847184025352805 0.4077185912009129 3 CTV 3 -1 25.674 0.0 0.0 2.6564 0.0 0.0 645.3689518758084 0.0 645.3689518758084 0.0 18.68440000316717 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 CTV 2.6564 - 22 + 1 1.119 29748.9 1.0 8165 5492 13658 HBL1_DMSO_200M_050219_1,13659 HBL1_DMSO_200M_050219_1,13659,LSYSQAVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13660 68.431 29.0 1461300.0 25 0 77423.0 -1 RCHRRRRRCCC 11 49 866.9067123982009 1731.7988718632016 2 867.4077026247978 MULTI CID FTMS 0 0 0 13658 2128336.0 0.1182712451751505 15 -0.200653076171875 2 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 3 [MN]PN{I|L}NADQ 9 -1 50.881 0.0 0.0 2.938 0.0 0.0 0.0 731.3465059869749 731.3465059869749 26.72430902965729 0.0 0.0 0.0 0 0.6677353201839438 1.5228787452803376 0.0 0.4247425010840047 [MN]PN{I|L}NADQ 2.938 - 141 + 1 1.119 34530.9 1.0 8166 5492 13658 HBL1_DMSO_200M_050219_1,13660 HBL1_DMSO_200M_050219_1,13660,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13662 68.435 143.0 2057800.0 25 0 169510.0 -1 0 162 532.316531502939 531.309255036339 1 532.3167602419853 MULTI CID FTMS 0 0 0 13661 1125363.375 0.6065460353186856 7 -0.0987625122070312 1 3 {[VA]|[{I|L}G]}VM{I|L} 5 -1 + 41.603 0.0 0.0 7.8303 7.8303 94.208 0.0 0.0 0.0 2.103393277256544 7.825382125373963 2.103393277256544 11.322034741294251 0 0.9876954943324544 1.0969100130080565 0.0 0.0 {[VA]|[{I|L}G]}VM{I|L};{[VA]|[{I|L}G]}MV{I|L};{[ET]|[MV]}AV{I|L};[{I|L}T]W{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S[KA] 7.8303;5.6994;2.079;1.7958;0.88044;0.27909 -;-;-;-;-;- 247 1 1.119 238417.0 1.0 8167 5493 13661 HBL1_DMSO_200M_050219_1,13662 HBL1_DMSO_200M_050219_1,13662, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13663 68.439 172.0 957820.0 25 0 67544.0 + + 9445 FVDRGFYSV 9 168 545.316766575885 1088.61898021857 2 545.3168212771416 MULTI CID FTMS 0 0 0 13661 416469.84375 0.2739158964690654 -9 0.2756423950195312 2 Unmodified _FLASGVALQAL_ ENST00000567040.5_1_16:30087698-30094972:+|nuORF;ENSG00000149923|ENST00000279387|PPP4C 9.38312468134398 0.8308777417566128 3 {[QN]|[E{I|L}]|[KN]}GQHM{M(Oxidation (M))|F}E 8 -1 34.167 0.0 0.0 3.1386 0.0 0.0 0.0 114.13946296686996 114.13946296686996 15.191227545184628 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.6109243748081782 0.0 {[QN]|[E{I|L}]|[KN]}GQHM{M(Oxidation (M))|F}E 3.1386 - 1611 1 1.119 128930.6 1.0 8168 5493 13661 HBL1_DMSO_200M_050219_1,13663 HBL1_DMSO_200M_050219_1,13663,FLASGVALQAL False False FVDRGFYSV 68.438791 545.316821277142 23115004.0 13661.0 ENST00000567040.5_1_16:30087698-30094972:+|nuORF;;ENSG00000149923|ENST00000279387|PPP4C 3.548359235127767 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13664 68.44 26.0 3040200.0 25 0 268430.0 5333 DLFVPRPVL 9 84 528.3142700001846 0 528.3134643435478 PEAK CID FTMS 0 0 0 13661 1070894.125 0.0214568687722844 16 -0.2501678466796875 3 Unmodified _DLFVPRPVL_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555324.1_1_14:94545323-94547480:-|nuORF;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 25.399314129420983 0.152124705672316 3 PEDR 4 8 24.993 0.0 0.0 2.3699 0.0 0.0 230.17228261079416 324.1936129205688 554.365895531363 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 PEDR 2.3699 - 168 + 1 1.119 71157.2 1.0 8169 5493 13661 HBL1_DMSO_200M_050219_1,13664 HBL1_DMSO_200M_050219_1,13664,DLFVPRPVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13665 68.443 150.0 413980.0 25 0 52473.0 -1 DCLYDEEVIS 10 95 621.7611936772181 0 621.7617675662041 PEAK CID FTMS 0 0 0 13661 891863.375 0.7839709420431901 -2 0.0127716064453125 4 Carbamidomethyl (C) _DC(Carbamidomethyl (C))LYDEEVIS_ ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3;nc|ENSG00000075151|O43432|EIF4G3 13.90604991867851 0.345182617568752 3 V[NG]TE{M(Oxidation (M))|F} 6 -1 22.44 0.0 0.0 1.8075 0.0 0.0 218.1298569815861 373.0649813287719 591.194838310358 0.0 0.0 0.0 0.0 0 0.5 0.0 0.805462187404089 0.0 V[NG]TE{M(Oxidation (M))|F} 1.8075 - 183 + 1 1.119 52490.6 1.0 8170 5493 13661 HBL1_DMSO_200M_050219_1,13665 HBL1_DMSO_200M_050219_1,13665,DCLYDEEVIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13667 68.448 148.0 1002600.0 25 0 79943.0 + + -1 RVPSDPFTGV 10 174 537.7852921056375 1073.556031278075 2 537.7823974490166 MULTI CID FTMS 0 0 0 13666 527065.375 0.2698991357897936 8 -0.1182174682617187 1 Carbamidomethyl (C) _IPFPLC(Carbamidomethyl (C))ATGV_ ENSG00000185019|ENST00000217173|UBOX5;nc|ENSG00000185019|O94941-2|UBOX5 34.10243960390752 0.2198439752719791 3 [EP]{I|L}{[QS]|[NT]}P{M(Oxidation (M))|F}TGV 10 -1 + 67.884 0.0 0.0 6.3233 6.3233 84.571 0.0 0.0 0.0 5.033276666586119 4.318722087674658 4.318722087674658 5.033276666586119 0 1.1549471895720984 1.0 1.086696871556164 0.2614393726401688 [EP]{I|L}{[QS]|[NT]}P{M(Oxidation (M))|F}TGV;{[QN]|[E{I|L}]|[KN]}A[Q{I|L}]P{M(Oxidation (M))|F}TGV;[RV][PS]DP{M(Oxidation (M))|F}TGV;[VG][NG]{[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}TGV;[{I|L}P]E{[QS]|[NT]}P{M(Oxidation (M))|F}TGV;[{I|L}P]C[Q{I|L}]P{M(Oxidation (M))|F}TGV;[EP]{I|L}{[QS]|[NT]}P{M(Oxidation (M))|F}GTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ERRTGV;[QA]Q{[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}TGV;{[ET]|[MV]}P{[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}TGV 6.3233;5.8545;5.8253;5.2053;5.0584;4.9416;4.7835;4.5367;4.5288;4.5287 -;-;-;-;-;-;-;-;-;- 2255 1 1.119 121789.4 1.0 8171 5494 13666 HBL1_DMSO_200M_050219_1,13667 HBL1_DMSO_200M_050219_1,13667,IPFPLCATGV False False RVPSDPFTGV 68.447699 537.782397449017 25125370.0 13666.0 ENSG00000185019|ENST00000217173|UBOX5;;nc|ENSG00000185019|O94941-2|UBOX5 7.326414267222087 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13668 68.451 192.0 1228200.0 25 0 85979.0 + 32486 SALDTITTV 9 177 460.7502150266353 919.4858771200708 2 460.7491027712822 MULTI CID FTMS 0 0 0 13666 544060.0625 0.0348635143169415 7 -0.1064834594726562 2 Unmodified _SALDTITTV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 48.345845343767074 0.0439967357579942 3 {[TV]|[{I|L}S]}EGT 5 6 32.549 0.0 0.0 3.54 0.0 0.0 0.0 429.2335531276536 429.2335531276536 4.092781980451122 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.9361818737241736 0.0 {[TV]|[{I|L}S]}EGT 3.54 - 3380 1 1.119 186139.5 1.0 8172 5494 13666 HBL1_DMSO_200M_050219_1,13668 HBL1_DMSO_200M_050219_1,13668,SALDTITTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13669 68.454 144.0 760000.0 25 0 67215.0 + 12106 GQIELRTYV 9 135 539.7987761779644 0 539.7985717654228 PEAK CID FTMS 0 0 0 13666 559126.5 0.7265045124206276 8 -0.1182174682617187 3 Unmodified _GQIELRTYV_ ENSG00000167136|ENST00000372642|ENDOG 40.72490554402381 0.0581536288891289 3 {I|L}E{I|L}A 4 6 35.349 0.0 0.0 3.2804 0.0 0.0 185.07789639849932 463.2276095026001 648.3055059010994 0.0 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.3807196863200844 0.0 {I|L}E{I|L}A 3.2804 - 365 + 1 1.119 87537.3 1.0 8173 5494 13666 HBL1_DMSO_200M_050219_1,13669 HBL1_DMSO_200M_050219_1,13669,GQIELRTYV True True GQIELRTYV 68.454282 539.798571765423 9060632.0 13666.0 ENSG00000167136|ENST00000372642|ENDOG 5.795019308725993 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13670 68.458 182.0 321050.0 25 0 55315.0 -1 0 50 1010.4128488536184 0 1010.414050281048 PEAK CID FTMS 0 0 0 13666 332934.125 0.8729943419494668 -2 0.0173721313476562 4 3 Y 1 -1 6.9897 0.0 0.0 0.34623 0.0 0.0 158.0070198734491 1694.7184228732456 1852.7254427466944 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.34623 - 22 + 1 1.119 59316.6 1.0 8174 5494 13666 HBL1_DMSO_200M_050219_1,13670 HBL1_DMSO_200M_050219_1,13670, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13671 68.461 155.0 407010.0 25 0 36838.0 + 44052 YIPTCEPLW 9 105 561.269986264567 1120.525419595934 2 561.2709228396416 MULTI CID FTMS 0 0 0 13666 337718.8125 1.0 0 0.0 5 Unmodified _YIPTCEPLW_ REV__ENSG00000058668|ENST00000357681|ATP2B4;REV__nc|ENSG00000058668|P23634-2|ATP2B4;REV__nc|ENSG00000058668|P23634-3|ATP2B4;REV__nc|ENSG00000058668|P23634-4|ATP2B4;REV__nc|ENSG00000058668|P23634-5|ATP2B4;REV__nc|ENSG00000058668|P23634-7|ATP2B4;REV__nc|ENSG00000058668|P23634-8|ATP2B4;REV__nc|ENSG00000058668|P23634|ATP2B4 12.531546534597751 0.4974689918368763 3 {[QS]|[NT]}{I|L}SQ 5 -1 32.056 0.0 0.0 2.8608 0.0 0.0 0.0 574.2327919926714 574.2327919926714 14.776048796639625 0.0 0.0 0.0 0 0.5 0.0 0.7218487496163564 0.2134679910804404 {[QS]|[NT]}{I|L}SQ 2.8608 - 224 1 1.119 54910.0 1.0 8175 5494 13666 HBL1_DMSO_200M_050219_1,13671 HBL1_DMSO_200M_050219_1,13671,YIPTCEPLW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13673 68.465 9.4 4460200.0 25 0 761280.0 + 37880 TLVYHVVGV 9 74 493.78641273208495 985.55827253097 2 493.7868224978447 MULTI CID FTMS 0 0 0 13672 4421544.5 0.1949027761651754 9 -0.1309661865234375 1 Unmodified _TLVYHVVGV_ ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3 38.15118350030904 0.0856056900103839 3 [{I|L}T]VY 4 5 35.049 0.0 0.0 3.5563 0.0 0.0 0.0 506.2730806940063 506.2730806940063 12.830918867322296 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}T]VY 3.5563 + + 99 + 1 1.119 37470.2 1.0 8176 5495 13672 HBL1_DMSO_200M_050219_1,13673 HBL1_DMSO_200M_050219_1,13673,TLVYHVVGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13674 68.468 163.0 694150.0 25 0 39983.0 37036 TGAQGGQTEV 10 167 316.48506843663864 0 316.4847595095634 PEAK CID FTMS 0 0 0 13672 752923.625 1.0 0 0.0 2 Unmodified _TGAQGGQTEV_ ENST00000314134.3_1_11:45825971-45826406:+|nuORF 15.738622578938676 0.3312807585514225 3 {M(Oxidation (M))|F}EG 3 9 8.0376 0.0 0.0 1.2739 0.0 0.0 162.76245147113042 132.04612146549064 294.8085729366211 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 {M(Oxidation (M))|F}EG 1.2739 - 63 + 1 1.119 91878.6 1.0 8177 5495 13672 HBL1_DMSO_200M_050219_1,13674 HBL1_DMSO_200M_050219_1,13674,TGAQGGQTEV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13675 68.471 147.0 1060000.0 25 0 505900.0 + 25038 MPTLPPPSV 9 62 938.504020055545 937.4967435889448 1 938.5115844607352 MULTI CID FTMS 0 0 0 13672 697290.25 0.6803085163721648 -9 0.170654296875 3 Unmodified _MPTLPPPSV_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 96.28474662873226 0.0124266067997264 3 {NN|[MP]|[D{I|L}]|[EV]}T{I|L}PP[PS]V 9 0 + 59.051 0.0 0.0 6.2988 6.2988 79.428 0.0 0.0 0.0 1.7165906731557357 8.65279269351241 1.7165906731557357 1.7165906731557357 0 2.0 0.0 1.5228787452803376 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}T{I|L}PP[PS]V;[TP]M{I|L}PP[PS]V;[TP]{I|L}MPP[PS]V;[TP]{I|L}SP{I|L}[DP]V;{NN|[MP]|[D{I|L}]|[EV]}TP{I|L}P[PS]V;[TP]MP{I|L}P[PS]V;{NN|[MP]|[D{I|L}]|[EV]}T{I|L}PSV{[HG]|PP};[TP]{I|L}PMP[PS]V;[TP]{I|L}PS{I|L}[DP]V;{[HG]|PP}MT{I|L}P[PS]V 6.2988;6.1157;5.8443;5.641;5.0457;4.8626;4.341;4.3245;4.2865;4.2395 +;-;-;-;-;-;-;-;-;- + 649 1 1.119 105314.1 1.0 8178 5495 13672 HBL1_DMSO_200M_050219_1,13675 HBL1_DMSO_200M_050219_1,13675,MPTLPPPSV True True MPTLPPPSV 68.471453 938.511584460735 102041900.0 13672.0 nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4 8.50463898976644 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13676 68.475 172.0 963970.0 25 0 217480.0 2952 AVHSSPEV 8 134 413.2103098553646 0 413.2103454470634 PEAK CID FTMS 0 0 0 13672 585957.5625 1.0 0 0.0 4 Unmodified _AVHSSPEV_ ENSG00000169340|ENST00000302451|PDILT 19.438996006549623 0.4285751805470146 3 EDV 3 7 9.6927 0.0 0.0 1.1757 0.0 0.0 97.020928218605 381.2264626831964 478.2473909018013 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EDV 1.1757 - 147 + 1 1.119 131816.5 1.0 8179 5495 13672 HBL1_DMSO_200M_050219_1,13676 HBL1_DMSO_200M_050219_1,13676,AVHSSPEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13677 68.478 166.0 272780.0 25 0 53137.0 -1 0 31 1010.4128488536184 0 1010.078784167767 PEAK CID FTMS 0 0 0 13672 234633.40625 0.6152377323549536 -1 0.0179443359375 5 3 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.27167 0.0 0.0 1346.4881600101678 522.2338961236936 1868.722056133861 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.27167 - 8 + 1 1.119 47983.3 1.0 8180 5495 13672 HBL1_DMSO_200M_050219_1,13677 HBL1_DMSO_200M_050219_1,13677, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13678 68.481 158.0 1188400.0 25 0 73233.0 + 1288 GQASLGVIKV 10 202 486.78171251851626 971.5488721038324 2 486.7821533083916 MULTI CID FTMS 0 0 0 13672 404516.0625 1.0 0 0.0 6 Unmodified _AIQKPLCSL_ ENSG00000173145|ENST00000371361|NOC3L 16.942295170755138 0.3780752226737986 3 {I|L}CS{I|L} 4 5 19.864 0.0 0.0 2.0445 0.0 0.0 537.3313555966475 0.0 537.3313555966475 0.0 1.916191501338464 0.0 0.0 0 0.0 0.0 0.5451140161145328 0.0 + {I|L}CS{I|L} 2.0445 + + 2401 + 1 1.119 143208.8 1.0 8181 5495 13672 HBL1_DMSO_200M_050219_1,13678 HBL1_DMSO_200M_050219_1,13678,AIQKPLCSL False False GQASLGVIKV 68.481209 486.782153308392 6424727.0 13672.0 ENSG00000173145|ENST00000371361|NOC3L 0.9070153733094534 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13680 68.486 126.0 1515000.0 25 0 415680.0 + 11314 GEVVLGVVP 9 128 434.7594325280603 867.5043121229206 2 434.7599670290947 MULTI CID FTMS 0 0 0 13679 765219.0 0.3868925944670474 10 -0.1360321044921875 1 Unmodified _GEVVLGVVP_ REV__ENSG00000119121|ENST00000360774|TRPM6;REV__ENST00000483186.1_1_9:77435204-77442805:-|nuORF;REV__nc|ENSG00000119121|Q9BX84-2|TRPM6;REV__nc|ENSG00000119121|Q9BX84-3|TRPM6;REV__nc|ENSG00000119121|Q9BX84-4|TRPM6;REV__nc|ENSG00000119121|Q9BX84-5|TRPM6;REV__nc|ENSG00000119121|Q9BX84-6|TRPM6 5.230669730166228 0.7320841359114558 3 {[SA]|[TG]}Y{I|L} 4 -1 15.301 0.0 0.0 1.7638 0.0 0.0 0.0 430.2646935528613 430.2646935528613 6.374948332574197 0.0 0.0 0.0 0 0.0 0.1870866433571444 0.3252574989159953 0.0 {[SA]|[TG]}Y{I|L} 1.7638 - 70 1 1.119 152152.9 1.0 8182 5496 13679 HBL1_DMSO_200M_050219_1,13680 HBL1_DMSO_200M_050219_1,13680,GEVVLGVVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13681 68.489 162.0 213890.0 25 0 58780.0 + 45705 YYDGDVGNYYY 11 59 696.2745239138603 0 696.2745239138603 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _YYDGDVGNYYY_ ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF 13.042465956692816 0.4221659143281722 3 N 1 10 7.3464 0.0 0.0 0.52831 0.0 0.0 1141.422020384558 132.04604517154533 1273.4680655561033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + N 0.52831 + + 54 + 1 1.119 33408.0 1.0 8183 5496 13679 HBL1_DMSO_200M_050219_1,13681 HBL1_DMSO_200M_050219_1,13681,YYDGDVGNYYY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13682 68.492 150.0 645630.0 25 0 62398.0 29822 QQLGEVVKL 9 142 507.302959986164 1012.591367039128 2 507.3039733767509 MULTI CID FTMS 0 0 0 13679 520816.46875 0.966053276394628 10 -0.1360321044921875 3 Unmodified _QQLGEVVKL_ ENSG00000095564|ENST00000265990|BTAF1 27.628801355627647 0.1796483985696185 3 {I|L}PE{I|L}CVVK 8 6 69.524 0.0 0.0 6.8659 0.0 0.0 0.0 128.0722597711547 128.0722597711547 49.06595050180934 0.0 0.0 0.0 0 1.0114393726401687 1.3979400086720375 0.4247425010840047 0.4005149978319906 {I|L}PE{I|L}CVVK 6.8659 - 1051 + 1 1.119 78837.7 1.0 8184 5496 13679 HBL1_DMSO_200M_050219_1,13682 HBL1_DMSO_200M_050219_1,13682,QQLGEVVKL False True LPEITVRSV 68.491728 507.303973376751 19338594.0 13679.0 ENST00000472184.1_1_21:30378740-30380682:-|nuORF;;ENSG00000156253|ENST00000493196|RWDD2B 0.3722002779444058 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13684 68.499 163.0 206650.0 25 0 19068.0 + -1 VDQACYQMLD 10 67 621.7598359144569 1241.5051188957136 2 622.2628051638603 MULTI CID FTMS 0 0 0 13683 509321.78125 0.0655319030092113 16 -0.3873291015625 1 Carbamidomethyl (C) _VDQAC(Carbamidomethyl (C))YQMLD_ REV__ENSG00000140521|ENST00000268124|POLG 10.823927491677226 0.6659270209832991 3 CS{I|L} 3 -1 23.984 0.0 0.0 1.9319 0.0 0.0 920.3719839853604 0.0 920.3719839853604 0.0 2.685690803236298 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 CS{I|L} 1.9319 - 86 + 1 1.091 30469.5 1.0 8185 5497 13683 HBL1_DMSO_200M_050219_1,13684 HBL1_DMSO_200M_050219_1,13684,VDQACYQMLD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13685 68.503 175.0 124960.0 25 0 12702.0 -1 LPYMIQCKHF 10 45 648.31558864376 0 648.3157836794853 PEAK CID FTMS 0 0 0 13683 379296.875 1.0 0 0.0 2 Oxidation (M) _LPYM(Oxidation (M))IQCKHF_ ENSG00000178597|ENST00000319098|PSAPL1 10.073929032068715 0.3742530088597855 3 PY 2 -1 10.969 0.0 0.0 0.84729 0.0 0.0 113.08422796935731 918.3963921346624 1031.4806201040196 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PY 0.84729 + + 16 + 1 1.091 23978.1 1.0 8186 5497 13683 HBL1_DMSO_200M_050219_1,13685 HBL1_DMSO_200M_050219_1,13685,LPYMIQCKHF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13687 68.511 232.0 593530.0 25 0 61312.0 + 16963 KIPTPIVGV 9 144 462.3009894181526 922.5874259031052 2 462.3017150759697 MULTI CID FTMS 0 0 0 13686 313842.5625 0.5069398475207201 2 -0.0268478393554687 1 Unmodified _KIPTPIVGV_ ENSG00000090060|ENST00000216277|PAPOLA 47.74868867922204 0.0453060283459952 3 VAVAVP{I|L}VGV 10 5 + 73.875 0.0 0.0 8.0074 8.0074 95.962 0.0 0.0 0.0 55.71456278567766 11.17062012938861 11.17062012938861 19.26213785839081 0 1.4489700043360187 1.3010299956639813 0.0 0.0 VAVAVP{I|L}VGV;VA[R{I|L}]P{I|L}VGV;VAVAVP{I|L}AA{I|L};{[VA]|[{I|L}G]}VAVP{I|L}VR;[VG]{I|L}AVP{I|L}VR;VAVAV[RV]P{I|L};[{I|L}P]KTP{I|L}VR;[K{I|L}]PTP{I|L}VR;{[VA]|[{I|L}G]}AVVP{I|L}VR;V[Q{I|L}]VP{I|L}VGV 8.0074;5.9196;5.6458;5.4334;5.2502;5.0471;5.0347;4.8535;4.6467;4.5094 -;-;-;-;-;-;-;-;-;- 950 + 1 1.091 107951.1 1.0 8187 5498 13686 HBL1_DMSO_200M_050219_1,13687 HBL1_DMSO_200M_050219_1,13687,KIPTPIVGV True True KIPTPIVGV 68.511424 462.30171507597 4617317.5 13686.0 ENSG00000090060|ENST00000216277|PAPOLA 4.486948013305664 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13688 68.516 226.0 143070.0 25 0 8910.6 + 6285 DVDICDNNHSL 11 80 622.7623779177666 0 622.7623779177666 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _DVDICDNNHSL_ REV__ENSG00000166147|ENST00000316623|FBN1 12.240655878213236 0.4295705806160874 3 T 1 -1 8.9794 0.0 0.0 0.72268 0.0 0.0 796.2896019025405 342.1477450006469 1138.4373469031875 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 T 0.72268 - 18 + 1 1.091 30160.0 1.0 8188 5498 13686 HBL1_DMSO_200M_050219_1,13688 HBL1_DMSO_200M_050219_1,13688,DVDICDNNHSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13690 68.524 198.0 1282300.0 25 0 126770.0 + + -1 YPPSMEAVV 9 106 992.4744873444312 991.4672108778312 1 993.4808837771416 MULTI CID FTMS 0 0 0 13689 932437.875 0.8608577668969596 13 -0.2742996215820312 1 Carbamidomethyl (C) _QDVIETC(Carbamidomethyl (C))K_ ENST00000574894.1_1_16:16367711-16371421:+|nuORF;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;nc|ENSG00000185164|Q5JPE7|NOMO2 28.486842064014134 0.4448922141344407 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VE{I|L} 8 -1 + 41.419 0.0 0.0 4.1776 4.1776 77.902 0.0 0.0 0.0 0.8978030532459513 18.85914894226346 0.8978030532459513 5.484550065040281 0 0.0 1.6989700043360187 0.5 0.3054621874040891 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VE{I|L};YPV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RC(Carbamidomethyl (C)){[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QG]|[NA]}M{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};SKA{M(Oxidation (M))|F}NSPE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PSME[VG]{I|L};SKAEM{[QG]|[NA]}E{I|L};{[QS]|[NT]}VT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NP]{I|L} 4.1776;3.6244;3.035;2.9399;2.2864;2.2314;2.1088;2.1087;2.0494;2.0216 -;-;-;-;-;-;-;-;-;- 2161 1 1.091 167525.7 1.0 8189 5499 13689 HBL1_DMSO_200M_050219_1,13690 HBL1_DMSO_200M_050219_1,13690,QDVIETCK False False YPPSMEAVV 68.523932 993.480883777142 453104288.0 13689.0 ENST00000574894.1_1_16:16367711-16371421:+|nuORF;;ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 6.424622535705566 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13691 68.526 77.0 701930.0 25 0 53200.0 + 27896 PLSPLFLPL 9 98 498.808281919059 0 498.8086730837822 PEAK CID FTMS 0 0 0 13689 756964.0 1.0 0 0.0 2 Unmodified _PLSPLFLPL_ REV__ENST00000314940.6_1_5:137089877-137089988:-|nuORF 30.22481116460888 0.1097735003385577 3 PS 2 -1 14.196 0.0 0.0 1.4259 0.0 0.0 113.0828260280767 695.4100463286093 808.492872356686 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 PS 1.4259 - 273 + 1 1.091 47400.2 1.0 8190 5499 13689 HBL1_DMSO_200M_050219_1,13691 HBL1_DMSO_200M_050219_1,13691,PLSPLFLPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13692 68.53 201.0 1092500.0 25 0 64434.0 + -1 LGCGQNEPMG 10 181 531.7194778387649 1061.4244027443297 2 531.7191039919853 MULTI CID FTMS 0 0 0 13689 610342.25 1.0 0 0.0 3 Carbamidomethyl (C) _LGC(Carbamidomethyl (C))GQNEPMG_ REV__ENST00000421161.1_1_6:159528830-159529112:+|nuORF 10.823927491677226 0.6659270209832991 3 {[VA]|[{I|L}G]}VM{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L} 8 -1 25.473 0.0 0.0 2.3999 0.0 0.0 0.0 211.9396630477835 211.9396630477835 6.186966643810763 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.5796896906561032 0.0 {[VA]|[{I|L}G]}VM{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L} 2.3999 - 1746 1 1.091 171552.2 1.0 8191 5499 13689 HBL1_DMSO_200M_050219_1,13692 HBL1_DMSO_200M_050219_1,13692,LGCGQNEPMG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13694 68.535 214.0 626300.0 25 0 64034.0 -1 VTEKMLKAL 9 156 524.8087328898876 1047.602912846575 2 524.8099243044853 MULTI CID FTMS 0 0 0 13693 416759.90625 0.7960672847104335 -5 0.0686416625976562 1 Oxidation (M) _VTEKM(Oxidation (M))LKAL_ ENSG00000122008|ENST00000241436|POLK;nc|ENSG00000122008|Q9UBT6-2|POLK;nc|ENSG00000122008|Q9UBT6-4|POLK;nc|ENSG00000122008|Q9UBT6-5|POLK;nc|ENSG00000122008|Q9UBT6-6|POLK;nc|ENSG00000122008|Q9UBT6-7|POLK;nc|ENSG00000122008|Q9UBT6-8|POLK 12.531546534597751 0.4974689918368763 3 DV{M(Oxidation (M))|F}S[HS]N{I|L} 8 -1 30.342 0.0 0.0 2.8964 0.0 0.0 130.1775323452436 0.0 130.1775323452436 0.0 14.400188056678829 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 DV{M(Oxidation (M))|F}S[HS]N{I|L} 2.8964 - 1901 + 1 1.091 112233.1 1.0 8192 5500 13693 HBL1_DMSO_200M_050219_1,13694 HBL1_DMSO_200M_050219_1,13694,VTEKMLKAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13695 68.541 294.0 100310.0 25 0 10799.0 -1 0 46 1170.132373034954 0 1170.132373034954 PEAK CID FTMS 0 0 0 -1 0 2 3 TE{I|L}{I|L}{I|L}Q 6 -1 32.638 0.0 0.0 1.3958 0.0 0.0 1349.704918333777 288.1005037897094 1637.8054221234863 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 TE{I|L}{I|L}{I|L}Q 1.3958 - 480 + 1 1.091 26339.3 1.0 8193 5500 13693 HBL1_DMSO_200M_050219_1,13695 HBL1_DMSO_200M_050219_1,13695, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13696 68.545 238.0 394130.0 25 0 28418.0 + 19650 GIVGGLSTV 9 119 401.7373535037041 0 401.7373535037041 PEAK CID FTMS 0 0 0 -1 0 3 Unmodified _LGGVGSLSL_ ENSG00000165678|ENST00000372134|GHITM 26.34127834903884 0.1435854383732919 3 A 1 9 6.9897 0.0 0.0 0.87212 0.0 0.0 659.3488239734255 68.0515612237914 727.4003851972169 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.87212 - 107 + 1 1.091 76279.8 1.0 8194 5500 13693 HBL1_DMSO_200M_050219_1,13696 HBL1_DMSO_200M_050219_1,13696,LGGVGSLSL False False GIVGGLSTV 68.545267 401.737353503704 8291919.0 13693.0 ENSG00000165678|ENST00000372134|GHITM 5.128658135732015 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13697 68.549 220.0 369960.0 25 0 25814.0 + 10680 FVTPDTDIKV 10 126 567.8055367600692 1133.5965205869384 2 567.8059570193291 MULTI CID FTMS 0 0 0 13693 386614.25 0.2713181939478131 -15 0.3407821655273437 4 Unmodified _FVTPDTDIKV_ ENSG00000123338|ENST00000293373|NCKAP1L;ENST00000548980.1_1_12:54925998-54930034:+|nuORF;nc|ENSG00000123338|P55160-2|NCKAP1L 33.4449034751529 0.2267874087365337 3 [{M(Oxidation (M))|F}V]TPD{[ES]|[DT]|[{I|L}C]}{I|L}KV 10 0 + 40.895 0.0 0.0 3.6076 3.6076 77.585 0.0 0.0 0.0 18.273589343863303 0.2287874528033739 0.2287874528033739 6.748650278674042 0 1.3494850021680094 0.5528419686577808 0.4247425010840047 0.0 + + [{M(Oxidation (M))|F}V]TPD{[ES]|[DT]|[{I|L}C]}{I|L}KV;[{M(Oxidation (M))|F}V]T[WR]PT{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]TP[WR]T{NN|[MP]|[D{I|L}]|[EV]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[WR]T{NN|[MP]|[D{I|L}]|[EV]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[WR]PT{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]T{[QV]|[N{I|L}]|[RA]|[KV]}DPT{NN|[MP]|[D{I|L}]|[EV]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}DPT{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]T[WR]{[ET]|[MV]}PV;[{M(Oxidation (M))|F}V]T[WR][EP]S{I|L};[{I|L}P]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]T{NN|[MP]|[D{I|L}]|[EV]} 3.6076;3.0122;3.0122;2.9969;2.9969;2.9719;2.9565;1.7981;1.734;1.5791 +;-;-;-;-;-;-;-;-;- + 398 + 1 1.091 66912.5 1.0 8195 5500 13693 HBL1_DMSO_200M_050219_1,13697 HBL1_DMSO_200M_050219_1,13697,FVTPDTDIKV False True FVTPDTDIKV 68.54943 567.805957019329 11135211.0 13693.0 ENST00000548980.1_1_12:54925998-54930034:+|nuORF;;nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 6.482589562733968 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13699 68.553 13.0 14479000.0 25 0 1527600.0 42422 VTEMSYYL 8 99 503.2318295443582 1004.4491061555163 2 503.2321655154228 MULTI CID FTMS 0 0 0 13698 4562805.5 0.1773041447883143 -14 0.2195281982421875 1 Unmodified _VTEMSYYL_ L1ME1_dup14741|chr8:25510836-25512219:-|2.1947036737014773|0.2188578600898351|3.33|48.0|44|2|sense 19.438996006549623 0.6237395211498085 3 V{M(Oxidation (M))|F} 2 6 34.949 0.0 0.0 3.4794 0.0 0.0 0.0 755.3069988104453 755.3069988104453 11.805394509759653 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 V{M(Oxidation (M))|F} 3.4794 - 355 + 1 1.091 147275.0 1.0 8196 5501 13698 HBL1_DMSO_200M_050219_1,13699 HBL1_DMSO_200M_050219_1,13699,VTEMSYYL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 13700 68.555 34.0 3379300.0 25 0 380750.0 + 34278 SLQSQTEDTV 10 136 554.2616257128416 1106.508698492483 2 554.2623168826103 MULTI CID FTMS 0 0 0 13698 1877531.875 0.0486952658942021 16 -0.4587020874023437 2 Unmodified _SLQSQTEDTV_ ENST00000497953.5_3_3:52738772-52739516:-|nuORF 55.50274090549119 0.048383292844968 3 {[QS]|[NT]}{I|L}SQP{I|L} 7 7 76.611 0.0 0.0 6.9236 0.0 0.0 0.0 350.08307528375184 350.08307528375184 40.87000237076445 0.0 0.0 0.0 0 2.4634679910804405 0.8239087409443188 2.1866654986684733 0.5451140161145328 {[QS]|[NT]}{I|L}SQP{I|L} 6.9236 - 1756 1 1.091 94296.5 1.0 8197 5501 13698 HBL1_DMSO_200M_050219_1,13700 HBL1_DMSO_200M_050219_1,13700,SLQSQTEDTV True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13701 68.558 155.0 1188200.0 25 0 105850.0 -1 VMVSSKCGSL 10 172 534.2628789365131 1066.511204939826 2 534.2628051638603 MULTI CID FTMS 0 0 0 13698 1009423.8125 0.0585578207131076 17 -0.4806594848632812 3 Carbamidomethyl (C) _VMVSSKC(Carbamidomethyl (C))GSL_ ENST00000379568.3_1_6:10707667-10709213:+|nuORF 32.30548876998284 0.2428506522065767 3 MVA{[{M(Oxidation (M))|F}C]|[YS]}VTV 8 -1 66.464 0.0 0.0 6.2319 0.0 0.0 0.0 213.07232080631096 213.07232080631096 38.49993446776488 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.1989700043360187 0.0 MVA{[{M(Oxidation (M))|F}C]|[YS]}VTV 6.2319 - 2383 + 1 1.091 148459.6 1.0 8198 5501 13698 HBL1_DMSO_200M_050219_1,13701 HBL1_DMSO_200M_050219_1,13701,VMVSSKCGSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13702 68.561 178.0 1072800.0 25 0 121470.0 + 17858 KQLEEAIQL 9 187 536.305645550056 1070.596738166912 2 536.3051635622978 MULTI CID FTMS 0 0 0 13698 661588.5 0.1903395394471239 -15 0.2591934204101562 4 Unmodified _KQLEEAIQL_ ENSG00000119397|ENST00000373855|CNTRL;ENST00000373851.6_1_9:123874787-123912836:+|nuORF;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 78.7280429016045 0.0178249292250809 3 [AG]{I|L}KEEA{I|L}Q{I|L} 10 3 + 88.444 0.0 0.0 8.2612 8.2612 88.115 0.0 0.0 0.0 4.101744650890495 16.53212513775344 4.101744650890495 4.101744650890495 0 0.3252574989159953 1.6989700043360187 1.5044321917401078 0.8243923658886187 [AG]{I|L}KEEA{I|L}Q{I|L};{[VA]|[{I|L}G]}AKEEA{I|L}Q{I|L};[{I|L}A]GKEEA{I|L}Q{I|L};[Q{I|L}]KEEA{I|L}Q{I|L};[AG]{I|L}KEEA{I|L}[AG]{I|L};[AG]{I|L}KEE{I|L}AQ{I|L};{[VA]|[{I|L}G]}AKEEA{I|L}[AG]{I|L};{[VA]|[{I|L}G]}AKEE{I|L}AQ{I|L};[{I|L}A]GKEEA{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}QKEA{I|L}Q{I|L} 8.2612;7.8781;7.7489;7.672;7.4052;7.3021;7.0221;6.919;6.8929;6.8279 -;-;-;-;-;-;-;-;-;- 6392 1 1.091 145574.0 1.0 8199 5501 13698 HBL1_DMSO_200M_050219_1,13702 HBL1_DMSO_200M_050219_1,13702,KQLEEAIQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13704 68.565 12.0 4935700.0 25 0 332170.0 + 41410 VPLDKQITI 9 103 513.8132827839034 1025.6120126346068 2 513.8135253787041 MULTI CID FTMS 0 0 0 13703 5853854.0 0.3914360692526119 -19 0.487213134765625 1 Unmodified _VPLDKQITI_ ENSG00000163938|ENST00000418458|GNL3;nc|ENSG00000163938|Q9BVP2-2|GNL3 45.69961567697781 0.0497987121815769 3 [VP]EKQ{I|L}T 7 3 47.484 0.0 0.0 4.6298 0.0 0.0 0.0 227.13609767631343 227.13609767631343 24.495557461415416 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.3807196863200844 0.0 [VP]EKQ{I|L}T 4.6298 - 740 1 1.091 50808.1 1.0 8200 5502 13703 HBL1_DMSO_200M_050219_1,13704 HBL1_DMSO_200M_050219_1,13704,VPLDKQITI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13705 68.566 11.0 2168000.0 25 0 186600.0 30421 RCPWHHGV 8 58 331.160789756768 990.460539870504 3 331.1605712771416 MULTI CID FTMS 0 0 0 13703 5005297.0 0.6803945972941884 7 -0.1197738647460937 2 Unmodified _RCPWHHGV_ ENST00000415794.1_1_3:139212742-139212994:+|nuORF 5.760428011301431 0.7893668129297577 3 V 1 7 12.764 0.0 0.0 1.2887 0.0 0.0 873.3809556803658 0.0 873.3809556803658 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2887 + + 18 + 1 1.091 24336.2 1.0 8201 5502 13703 HBL1_DMSO_200M_050219_1,13705 HBL1_DMSO_200M_050219_1,13705,RCPWHHGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13706 68.568 16.0 2871000.0 25 0 418900.0 + 38810 TVFHECNR 8 54 335.8238027891444 1004.4495789676332 3 335.8234435915947 MULTI CID FTMS 0 0 0 13703 3718529.75 0.4389345007784134 10 -0.2288284301757812 3 Unmodified _TVFHECNR_ REV__ENSG00000133321|ENST00000255688|PLAAT4;REV__ENST00000537871.1_1_11:63304294-63313725:+|nuORF;REV__ENST00000544107.1_1_11:63304348-63313725:+|nuORF;REV__nc|ENSG00000133321|Q9UL19-2|PLAAT4 7.289230182591677 0.7800870086367542 3 TVT 3 -1 28.188 0.0 0.0 2.8063 0.0 0.0 0.0 700.2645782231224 700.2645782231224 21.197887582883936 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TVT 2.8063 - 13 + 1 1.091 41653.0 1.0 8202 5502 13703 HBL1_DMSO_200M_050219_1,13706 HBL1_DMSO_200M_050219_1,13706,TVFHECNR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13707 68.569 36.0 1327800.0 25 0 106890.0 -1 0 74 653.3282048771061 1956.9627852315184 3 653.6620361208916 MULTI CID FTMS 0 0 0 13703 2248725.25 0.4816609136246906 7 -0.1197738647460937 4 3 VQP 3 -1 13.065 0.0 0.0 0.66759 0.0 0.0 1226.5963434363994 403.16669641666255 1629.763039853062 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 VQP 0.66759 - 306 + 1 1.091 41350.9 1.0 8203 5502 13703 HBL1_DMSO_200M_050219_1,13707 HBL1_DMSO_200M_050219_1,13707, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13708 68.57 26.0 2764700.0 25 0 311480.0 + 43939 YGITALTI 8 91 426.24605437218537 850.4775558111708 2 426.2460510134697 MULTI CID FTMS 0 0 0 13703 2038223.625 0.6154878232541903 7 -0.1197738647460937 5 Unmodified _YGITALTI_ REV__ENSG00000184156|ENST00000388996|KCNQ3;REV__ENST00000519589.1_1_8:133153289-133492518:-|nuORF;REV__nc|ENSG00000184156|O43525-2|KCNQ3 10.183394434864962 0.7604730176254005 3 {[QS]|[NT]}{I|L}S 4 -1 18.536 0.0 0.0 2.1794 0.0 0.0 0.0 432.2466602446536 432.2466602446536 2.3377174720082508 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.6139829889124311 0.0 {[QS]|[NT]}{I|L}S 2.1794 - 165 1 1.091 63080.4 1.0 8204 5502 13703 HBL1_DMSO_200M_050219_1,13708 HBL1_DMSO_200M_050219_1,13708,YGITALTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13709 68.571 48.0 638390.0 25 0 55314.0 + -1 IYLSICTFY 9 65 590.2898727825948 1178.5651926319897 2 590.2897216677666 MULTI CID FTMS 0 0 0 -1 0 6 Carbamidomethyl (C) _IYLSIC(Carbamidomethyl (C))TFY_ REV__ENST00000493021.5_1_2:162567177-162757603:+|nuORF 4.75600775471527 0.7486543447549536 3 V 1 -1 11.259 0.0 0.0 0.95532 0.0 0.0 1061.485448224566 0.0 1061.485448224566 0.0 8.784809756568528 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.95532 - 28 + 1 1.091 28899.0 1.0 8205 5502 13703 HBL1_DMSO_200M_050219_1,13709 HBL1_DMSO_200M_050219_1,13709,IYLSICTFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13710 68.572 46.0 1430000.0 25 0 164610.0 + 4427 DAVVSFAHV 9 83 472.7457456306517 943.4769383281034 2 472.7458373904228 MULTI CID FTMS 0 0 0 13703 1272281.375 0.4268285175476375 14 -0.3861846923828125 7 Unmodified _DAVVSFAHV_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 50.855029805455786 0.0384952370514206 3 {[DA]|[EG]}VVS{M(Oxidation (M))|F}AHV 9 0 + 72.814 0.0 0.0 7.7176 7.7176 96.435 0.0 0.0 0.0 28.711375162600703 10.597718523607966 10.597718523607966 36.962724883926654 0 0.9247425010840048 1.6989700043360187 0.8494850021680094 0.0 + + {[DA]|[EG]}VVS{M(Oxidation (M))|F}AHV;WVV[EP]{[ES]|[DT]|[{I|L}C]}V;WVV[EP]{[DS]|[MA]|[CV]|TT}{I|L};[R{M(Oxidation (M))|F}]V{[ES]|[DT]|[{I|L}C]}AHV;[R{M(Oxidation (M))|F}][PA]{M(Oxidation (M))|F}AHV;[R{M(Oxidation (M))|F}]VVA[HC]{I|L};[R{M(Oxidation (M))|F}]V{[WT]|[RM]}HV 7.7176;3.7999;3.4809;1.549;1.3623;1.2299;1.1887 +;-;-;-;-;-;- + 197 + 1 1.091 56567.4 1.0 8206 5502 13703 HBL1_DMSO_200M_050219_1,13710 HBL1_DMSO_200M_050219_1,13710,DAVVSFAHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13711 68.575 151.0 1295900.0 25 0 125690.0 + 32364 RYPTSIASL 9 163 504.27971494636216 1006.5448769595243 2 504.7824279665947 MULTI CID FTMS 0 0 0 13703 905131.625 0.0308769675149218 28 -1.2942123413085938 8 Unmodified _RYPTSIASL_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 53.832793166522166 0.0319663582346103 3 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 5 + 54.35 0.0 0.0 5.3996 5.3996 73.731 0.0 0.0 0.0 0.0266478941126209 12.587418566968154 0.0266478941126209 0.0266478941126209 0 1.1861818737241734 1.3010299956639813 1.2856668758921828 0.0 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};[{I|L}T]G[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L};[{M(Oxidation (M))|F}V]A{I|L}{[WT]|[RM]}AS{I|L};{[VA]|[{I|L}G]}T[W{M(Oxidation (M))|F}]{I|L}AS{I|L};[{M(Oxidation (M))|F}V]A{I|L}{I|L}{[CA]|SS}AS{I|L};{[TV]|[{I|L}S]}A[KC][KS]AS{I|L};[{I|L}T]G[KC][KS]AS{I|L};[{M(Oxidation (M))|F}V]A[KG]{[QS]|[NT]}AS{I|L};[{M(Oxidation (M))|F}V]A{I|L}{I|L}T{[QC]|[C(Carbamidomethyl (C))A]}{I|L} 5.3996;5.397;4.8492;3.5232;3.5071;3.2242;3.2232;3.2206;3.0824;3.0602 -;-;-;-;-;-;-;-;-;- 2530 1 1.091 148442.9 1.0 8207 5502 13703 HBL1_DMSO_200M_050219_1,13711 HBL1_DMSO_200M_050219_1,13711,RYPTSIASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13713 68.579 23.0 1754300.0 25 0 169550.0 14473 IGESHWPQLV 10 73 583.3047655689543 1164.5949782047085 2 583.3051025271416 MULTI CID FTMS 0 0 0 13712 1792095.25 0.408067245087941 9 -0.2145767211914062 1 Unmodified _IGESHWPQLV_ ENST00000482990.1_1_2:27479185-27480240:-|nuORF 7.289230182591677 0.6929195370588109 3 [{I|L}P]{M(Oxidation (M))|F}G{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L} 8 8 21.006 0.0 0.0 1.8037 0.0 0.0 0.0 317.1335273592585 317.1335273592585 6.753060861382252 0.0 0.0 0.0 0 0.0 0.958607314841775 0.805462187404089 0.0 [{I|L}P]{M(Oxidation (M))|F}G{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L} 1.8037 - 94 1 1.041 35522.7 1.0 8208 5503 13712 HBL1_DMSO_200M_050219_1,13713 HBL1_DMSO_200M_050219_1,13713,IGESHWPQLV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13714 68.582 108.0 3169200.0 25 0 520610.0 + 20750 LLSSNLCSL 9 150 475.2530741705133 0 475.2528869509697 PEAK CID FTMS 0 0 0 13712 1569944.75 0.830887146801822 8 -0.1589431762695312 2 Unmodified _LLSSNLCSL_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 99.79894945604345 0.0288293043136998 3 C{I|L}NTVE 6 7 66.396 0.0 0.0 7.0002 0.0 0.0 218.1283274408329 68.05146967105702 286.17979711189 0.0 0.0 0.0 0.0 0 2.1549471895720984 0.0 1.4742887089386452 0.9749073637206092 C{I|L}NTVE 7.0002 - 1603 + 1 1.041 257123.9 1.0 8209 5503 13712 HBL1_DMSO_200M_050219_1,13714 HBL1_DMSO_200M_050219_1,13714,LLSSNLCSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13715 68.585 153.0 813990.0 25 0 118420.0 -1 0 88 979.4864728335726 1956.9583927339447 2 979.4836913943292 MULTI CID FTMS 0 0 0 -1 0 3 3 VTN{I|L} 4 -1 23.053 0.0 0.0 1.178 0.0 0.0 1208.579271852155 318.11130701236567 1526.6905788645206 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.8807196863200843 VTN{I|L} 1.178 - 2297 + 1 1.041 85479.7 1.0 8210 5503 13712 HBL1_DMSO_200M_050219_1,13715 HBL1_DMSO_200M_050219_1,13715, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13716 68.589 197.0 1069600.0 25 0 134970.0 -1 0 98 1121.0725771888197 0 1121.069384753704 PEAK CID FTMS 0 0 0 13712 656840.375 0.4524810832701219 3 -0.04180908203125 4 3 {I|L}PMVTVEQV 9 -1 57.38 0.0 0.0 2.5615 0.0 0.0 967.4930305554612 273.08857141666255 1240.5816019721235 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7544321917401078 0.805462187404089 {I|L}PMVTVEQV 2.5615 - 16737 + 1 1.041 130996.3 1.0 8211 5503 13712 HBL1_DMSO_200M_050219_1,13716 HBL1_DMSO_200M_050219_1,13716, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13717 68.592 166.0 1101700.0 25 0 89477.0 + 25425 NEDVKSLPI 9 194 507.7772529110997 0 507.7762939333916 PEAK CID FTMS 0 0 0 13712 561448.3125 0.3759954290417411 -13 0.1626052856445312 5 Unmodified _NEDVKSLPI_ REV__ENSG00000001084|ENST00000650454|GCLC 21.74664581756881 0.185237546287679 3 PE{I|L} 3 -1 21.018 0.0 0.0 2.0737 0.0 0.0 114.03070485899543 557.3045657067137 671.3352705657092 0.0 0.0 0.0 0.0 0 0.0572869970894639 0.0 0.4247425010840047 0.0 PE{I|L} 2.0737 - 403 + 1 1.041 147145.9 1.0 8212 5503 13712 HBL1_DMSO_200M_050219_1,13717 HBL1_DMSO_200M_050219_1,13717,NEDVKSLPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13719 68.596 12.0 4410300.0 25 0 462040.0 + 21545 LPIVTPALR 9 62 490.31826747417495 978.62198201515 2 490.3182861208916 MULTI CID FTMS 0 0 0 13718 5630101.5 0.7607230630184866 -3 0.0424270629882812 1 Unmodified _LPIVTPALR_ ENSG00000182481|ENST00000330459|KPNA2 32.78568957990786 0.1150597335874693 3 {I|L}P{I|L}VT 5 4 66.454 0.0 0.0 6.7905 0.0 0.0 0.0 452.2635592096313 452.2635592096313 47.5797002104666 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + {I|L}P{I|L}VT 6.7905 + + 83 + 1 1.041 44851.4 1.0 8213 5504 13718 HBL1_DMSO_200M_050219_1,13719 HBL1_DMSO_200M_050219_1,13719,LPIVTPALR True True LPIVTPALR 68.595881 490.318286120892 219954456.0 13718.0 ENSG00000182481|ENST00000330459|KPNA2 8.386834939320883 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13720 68.597 8.7 7175900.0 25 0 856240.0 + 21909 LPPHIIRL 8 65 320.21154587615865 957.612808228676 3 320.2113525271416 MULTI CID FTMS 0 0 0 13718 6642305.0 0.3658685238406213 30 -1.672149658203125 2 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 22.736283301280096 0.5659792798204337 3 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 0 + 62.115 0.0 0.0 6.4865 6.4865 82.24 0.0 0.0 0.0 51.14638779968488 5.484550065040281 5.484550065040281 3.0102999566398125 0 0.0 1.3979400086720375 0.0 0.0 + + {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 6.4865;6.1721;5.8578;4.0836 +;-;-;- + 80 + 1 1.041 53259.8 1.0 8214 5504 13718 HBL1_DMSO_200M_050219_1,13720 HBL1_DMSO_200M_050219_1,13720,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13722 68.602 146.0 756350.0 25 0 110830.0 + 25039 MPTLPPPSV 9 124 469.7543088661768 937.4940647991536 2 469.7545349001884 MULTI CID FTMS 0 0 0 13721 686017.0625 0.3820243697363756 -4 0.047607421875 1 Unmodified _MPTLPPPSV_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 92.8221339359638 0.0138398038803217 3 {NN|[MP]|[D{I|L}]|[EV]}T{I|L}PP 6 3 49.121 0.0 0.0 5.2396 0.0 0.0 0.0 298.1391813365162 298.1391813365162 25.995723020878167 0.0 0.0 0.0 0 1.174742501084005 2.0 0.9749073637206092 0.0 + {NN|[MP]|[D{I|L}]|[EV]}T{I|L}PP 5.2396 + + 764 1 1.041 89173.3 1.0 8215 5505 13721 HBL1_DMSO_200M_050219_1,13722 HBL1_DMSO_200M_050219_1,13722,MPTLPPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13723 68.603 58.0 680840.0 25 0 47406.0 + 26323 NSALVLKV 8 81 422.26837326786944 842.5221936025389 2 422.2678710818291 MULTI CID FTMS 0 0 0 13721 846262.125 0.6732010649749045 -2 0.0216217041015625 2 Unmodified _NSALVLKV_ ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF 20.453626601364224 0.6087503291685402 3 [NS]A 3 5 21.304 0.0 0.0 2.5286 0.0 0.0 0.0 567.3868535969326 567.3868535969326 3.788850580488752 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2887254899964357 0.0 + [NS]A 2.5286 + + 64 1 1.041 39282.5 1.0 8216 5505 13721 HBL1_DMSO_200M_050219_1,13723 HBL1_DMSO_200M_050219_1,13723,NSALVLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13724 68.606 163.0 582530.0 25 0 77263.0 + 40065 VGGTSGTK 8 86 706.3753160596489 705.3680395930488 1 706.3733398318291 MULTI CID FTMS 0 0 0 13721 773180.5 0.4550913711525743 10 -0.3388671875 3 Unmodified _VGGTSGTK_ REV__ENST00000493115.1_1_20:30451708-30457369:-|nuORF 5.230669730166228 0.792582437072536 3 V{I|L}VND{M(Oxidation (M))|F} 6 -1 + 84.091 0.0 0.0 11.922 11.922 97.503 0.0 0.0 0.0 15.143518785311072 15.143518785311072 15.143518785311072 15.143518785311072 0 1.774227503252014 1.5228787452803376 0.5866968715561641 1.2302046884880935 V{I|L}VND{M(Oxidation (M))|F};[{I|L}V]VND{M(Oxidation (M))|F};V{I|L}VGGD{M(Oxidation (M))|F};[DN]V{I|L}V{M(Oxidation (M))|F};[{I|L}V]NVD{M(Oxidation (M))|F};[{I|L}V]NDV{M(Oxidation (M))|F};[{I|L}V]VGGD{M(Oxidation (M))|F};{[NV]|[RG]}D{I|L}V{M(Oxidation (M))|F};[{I|L}V]GGVD{M(Oxidation (M))|F};[{I|L}V]GGDV{M(Oxidation (M))|F} 11.922;9.7747;8.842;8.5918;8.5017;7.8245;7.5893;6.3514;6.3163;5.6392 -;-;-;-;-;-;-;-;-;- 174 + 1 1.041 72277.1 1.0 8217 5505 13721 HBL1_DMSO_200M_050219_1,13724 HBL1_DMSO_200M_050219_1,13724,VGGTSGTK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13725 68.61 195.0 274650.0 25 0 37086.0 -1 0 49 1108.1548822227714 0 1108.158862292767 PEAK CID FTMS 0 0 0 13721 566134.25 0.7809963533118731 -7 0.0943527221679687 4 3 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.24769 0.0 0.0 894.5637184476931 1169.6541302427668 2064.21784869046 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.24769 - 8 + 1 1.041 50183.6 1.0 8218 5505 13721 HBL1_DMSO_200M_050219_1,13725 HBL1_DMSO_200M_050219_1,13725, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13726 68.614 176.0 355100.0 25 0 35474.0 + 21822 LPNNRELYI 9 81 566.3115234879363 1130.6084940426724 2 566.3121215701103 MULTI CID FTMS 0 0 0 13721 454216.34375 0.1076257884454533 -11 0.1540908813476562 5 Unmodified _LPNNRELYI_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78110025-78110175:-|nuORF 34.221707139014875 0.1071766711162635 3 {I|L}PN 3 6 44.469 0.0 0.0 3.9332 0.0 0.0 0.0 803.4018038385374 803.4018038385374 19.542877390256805 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.3494850021680094 + {I|L}PN 3.9332 + + 58 + 1 1.041 52167.7 1.0 8219 5505 13721 HBL1_DMSO_200M_050219_1,13726 HBL1_DMSO_200M_050219_1,13726,LPNNRELYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13727 68.617 188.0 270790.0 25 0 70478.0 -1 AYLLTVFCILF 11 51 680.3725269865741 1358.7305010399482 2 680.3753539919853 MULTI CID FTMS 0 0 0 13721 449808.8125 0.6195788877946952 10 -0.3388671875 6 Carbamidomethyl (C) _AYLLTVFC(Carbamidomethyl (C))ILF_ ENSG00000076716|ENST00000370828|GPC4;nc|ENSG00000076716|O75487-2|GPC4 3.5964929083625545 0.858179447565866 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}W 3 -1 20.29 0.0 0.0 1.4933 0.0 0.0 0.0 935.5206371085608 935.5206371085608 8.300756084811809 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}W 1.4933 - 47 1 1.041 46380.0 1.0 8220 5505 13721 HBL1_DMSO_200M_050219_1,13727 HBL1_DMSO_200M_050219_1,13727,AYLLTVFCILF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13729 68.622 158.0 352790.0 25 0 43007.0 36187 SVVSEQEAYL 10 84 562.775056806722 1123.535560680244 2 562.7752563357353 MULTI CID FTMS 0 0 0 13728 206257.40625 0.0238978123656339 -10 0.1360321044921875 1 Unmodified _SVVSEQEAYL_ ENSG00000144406|ENST00000673920|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;nc|ENSG00000144406|Q8N2C7-5|UNC80;nc|ENSG00000144406|Q8N2C7-6|UNC80;nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80 17.11289562659939 0.5604042439455784 3 [VS]VD{I|L}TR 7 7 70.974 0.0 0.0 6.317 0.0 0.0 0.0 350.0842379205688 350.0842379205688 58.49948217190132 0.0 0.0 0.0 0 1.1989700043360187 2.0 0.4247425010840047 0.0 [VS]VD{I|L}TR 6.317 - 91 + 1 1.041 50709.3 1.0 8221 5506 13728 HBL1_DMSO_200M_050219_1,13729 HBL1_DMSO_200M_050219_1,13729,SVVSEQEAYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13730 68.626 218.0 323330.0 25 0 34746.0 -1 FRYILNCMA 9 119 382.8527710948756 1145.5364838848268 3 382.8526794314384 MULTI CID FTMS 0 0 0 -1 0 2 Oxidation (M) _FRYILNCM(Oxidation (M))A_ ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6;nc|ENSG00000186976|Q5THR3-5|EFCAB6 7.608950283845883 0.6490595679007971 3 [HV]P{M(Oxidation (M))|F}VN{I|L} 7 -1 34.173 0.0 0.0 2.9831 0.0 0.0 0.0 336.0689295237518 336.0689295237518 18.68812756166129 0.0 0.0 0.0 0 0.3494850021680094 1.154901959985743 0.0 0.0 [HV]P{M(Oxidation (M))|F}VN{I|L} 2.9831 - 98 1 1.041 62173.4 1.0 8222 5506 13728 HBL1_DMSO_200M_050219_1,13730 HBL1_DMSO_200M_050219_1,13730,FRYILNCMA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13732 68.633 129.0 1068000.0 25 0 124330.0 + 30190 QVVGGIYGV 9 132 446.2502684615095 0 446.2505370974541 PEAK CID FTMS 0 0 0 13731 1377764.875 0.8922635385484935 -2 0.0291900634765625 1 Unmodified _QVVGGIYGV_ ENSG00000167658|ENST00000309311|EEF2 44.40701690623563 0.0469661192146891 3 {I|L}N[TP]G 5 8 9.9654 0.0 0.0 1.1191 0.0 0.0 337.16104610095016 68.05150018863515 405.2125462895853 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 1.0 0.4247425010840047 {I|L}N[TP]G 1.1191 - 76 + 1 1.041 110384.8 1.0 8223 5507 13731 HBL1_DMSO_200M_050219_1,13732 HBL1_DMSO_200M_050219_1,13732,QVVGGIYGV True True QVVGGIYGV 68.633198 446.250537097454 7336391.5 13731.0 ENSG00000167658|ENST00000309311|EEF2 7.077840169270833 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13733 68.636 168.0 663220.0 25 0 67454.0 7395 EGIGKIVL 8 122 414.76211459499535 827.5096762567907 2 414.7631713747978 MULTI CID FTMS 0 0 0 13731 838090.6875 0.0689268289704136 -9 0.1235427856445312 2 Unmodified _EGIGKIVL_ ENST00000393262.3_1_12:76741364-76741436:-|nuORF 23.1484247019978 0.5573009939494978 3 {[DA]|[EG]}[KG]{I|L}{I|L}[{I|L}V] 8 2 + 28.636 0.0 0.0 3.4604 3.4604 80.871 0.0 0.0 0.0 10.030189774986583 6.989700043360188 6.989700043360188 10.030189774986583 0 0.3807196863200844 1.5228787452803376 0.4247425010840047 0.0 {[DA]|[EG]}[KG]{I|L}{I|L}[{I|L}V];[VS]{[QG]|[NA]}{I|L}{I|L}[{I|L}V];{[SA]|[TG]}{[NV]|[RG]}{I|L}{I|L}[{I|L}V];[KG]{[DA]|[EG]}{I|L}{I|L}[{I|L}V];{I|L}{I|L}[KG]{[DA]|[EG]}[{I|L}V] 3.4604;2.2484;1.8074;1.3904;0.36848 -;-;-;-;- 99 1 1.041 92752.0 1.0 8224 5507 13731 HBL1_DMSO_200M_050219_1,13733 HBL1_DMSO_200M_050219_1,13733,EGIGKIVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13734 68.64 174.0 383750.0 25 0 25621.0 -1 0 92 949.9210082888604 0 949.9210082888604 PEAK CID FTMS 0 0 0 -1 0 3 3 VTC{I|L}NT 6 -1 53.305 0.0 0.0 2.8087 0.0 0.0 967.347313353308 296.1629427545532 1263.510256107861 0.0 0.0 0.0 0.0 0 0.0 0.0 2.1025684359364405 1.6184151806525389 VTC{I|L}NT 2.8087 - 1078 + 1 1.041 48341.9 1.0 8225 5507 13731 HBL1_DMSO_200M_050219_1,13734 HBL1_DMSO_200M_050219_1,13734, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13735 68.643 160.0 470030.0 25 0 15937.0 + 12314 GSFVKEFTTM 10 133 573.7763840753262 1145.5382152174525 2 573.7764160037041 MULTI CID FTMS 0 0 0 13731 607175.1875 0.7693711833089556 8 -0.3096771240234375 4 Unmodified _GSFVKEFTTM_ REV__ENST00000427274.6_1_17:28819755-28822475:+|nuORF 11.494710602746466 0.654671931888957 3 [HV]{M(Oxidation (M))|F}P{I|L}VN 7 -1 43.918 0.0 0.0 3.8338 0.0 0.0 0.0 336.0693742299491 336.0693742299491 15.22833515693982 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.0 0.0 [HV]{M(Oxidation (M))|F}P{I|L}VN 3.8338 - 2130 1 1.041 61399.8 1.0 8226 5507 13731 HBL1_DMSO_200M_050219_1,13735 HBL1_DMSO_200M_050219_1,13735,GSFVKEFTTM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13736 68.647 201.0 365830.0 25 0 38684.0 + 1697 ALPKSVPS 8 115 399.738530577423 0 399.7381774783134 PEAK CID FTMS 0 0 0 13731 509686.0 0.7352147915373689 -8 0.11053466796875 5 Unmodified _ALPKSVPS_ REV__nc|ENSG00000163110|Q96HC4-6|PDLIM5 5.230669730166228 0.5807325378471833 3 K 1 -1 1.5938 0.0 0.0 0.19986 0.0 0.0 388.19228835035534 278.1520174615844 666.3443058119398 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.19986 + + 4 + 1 1.041 61620.4 1.0 8227 5507 13731 HBL1_DMSO_200M_050219_1,13736 HBL1_DMSO_200M_050219_1,13736,ALPKSVPS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13738 68.651 13.0 4198000.0 25 0 200830.0 + 15585 IPYPLSENNQV 11 90 637.3245343686755 1272.6345158041509 2 637.3248779177666 MULTI CID FTMS 0 0 0 13737 7052029.0 0.5842363539493411 6 -0.2684326171875 1 Unmodified _IPYPLSENNQV_ ENSG00000104549|ENST00000265896|SQLE 65.23502041540118 0.047899150100457 3 [{I|L}P]YP{I|L}SENNQV 11 0 + 88.052 0.0 0.0 6.9189 6.9189 83.992 0.0 0.0 0.0 3.133345013315278 7.852135717294473 3.133345013315278 3.133345013315278 0 0.1989700043360188 1.5228787452803376 1.2614393726401687 0.9247425010840048 + + [{I|L}P]YP{I|L}SENNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENNQV;[{I|L}P]{M(Oxidation (M))|F}{I|L}{I|L}SENNQV;[{I|L}P]YP{I|L}SENGGQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}{I|L}SENNQV;[{I|L}P]YPS{I|L}ENNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENGGQV;[{I|L}P]YP{I|L}SEGGNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PS{I|L}ENNQV;[{I|L}P]{M(Oxidation (M))|F}{I|L}{I|L}SENGGQV 6.9189;6.6727;6.3696;6.2016;6.1234;6.0709;5.9554;5.8678;5.8247;5.6523 +;-;-;-;-;-;-;-;-;- + 1370 1 1.041 48186.6 1.0 8228 5508 13737 HBL1_DMSO_200M_050219_1,13738 HBL1_DMSO_200M_050219_1,13738,IPYPLSENNQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13739 68.652 4.8 3851500.0 25 0 381590.0 + -1 QNDFHCTV 8 50 510.7148672810575 1019.415181628915 2 511.2172729372978 MULTI CID FTMS 0 0 0 13737 5315622.0 0.5826063844653554 -1 0.0206527709960937 2 Carbamidomethyl (C) _QNDFHC(Carbamidomethyl (C))TV_ REV__ENSG00000105479|ENST00000674294|ODAD1;REV__ENST00000474199.5_1_19:48800699-48823634:-|nuORF;REV__nc|ENSG00000105479|Q96M63-5|ODAD1;REV__nc|ENSG00000105479|Q96M63|ODAD1 5.760428011301431 0.7893668129297577 3 TV 2 -1 13.271 0.0 0.0 1.3018 0.0 0.0 801.2873415183666 0.0 801.2873415183666 0.0 7.786596949921218 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TV 1.3018 + + 6 + 1 1.041 21573.8 1.0 8229 5508 13737 HBL1_DMSO_200M_050219_1,13739 HBL1_DMSO_200M_050219_1,13739,QNDFHCTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13740 68.654 98.0 2721700.0 25 0 250080.0 + 21911 LPPHIIRL 8 162 479.8140914407555 957.613629948311 2 479.8143493533134 MULTI CID FTMS 0 0 0 13737 2282764.25 0.6485806535657649 1 -0.0340576171875 3 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 68.08070601005525 0.1147890174299629 3 {I|L}PPH{I|L}{I|L}R{I|L} 8 0 + 96.685 0.0 0.0 10.096 10.096 95.885 0.0 0.0 0.0 61.31314759672132 14.904630595263413 14.904630595263413 9.564249121405496 0 1.4386218330464624 2.0 0.0 0.6203715150305281 + + {I|L}PPH{I|L}{I|L}R{I|L};{I|L}PP{I|L}H{I|L}R{I|L};{I|L}P{I|L}PH{I|L}R{I|L};{I|L}{I|L}PPH{I|L}R{I|L};[{I|L}P]HP{I|L}{I|L}R{I|L};{I|L}P{I|L}K[R{M(Oxidation (M))|F}][KG];[{I|L}P]H[R{I|L}][{I|L}P]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P{I|L}{I|L}R{I|L};{[HG]|PP}{I|L}H{I|L}{I|L}R{I|L};{I|L}{I|L}PK[R{M(Oxidation (M))|F}][KG] 10.096;9.0977;8.7833;5.5393;4.5712;3.8748;2.8934;1.9605;1.0421;0.63083 +;-;-;-;-;-;-;-;-;- + 1311 + 1 1.041 202936.6 1.0 8230 5508 13737 HBL1_DMSO_200M_050219_1,13740 HBL1_DMSO_200M_050219_1,13740,LPPHIIRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13741 68.657 126.0 2275700.0 25 0 185460.0 + 25244 MVPEDVPRL 9 161 528.2816446980111 1054.548736462822 2 528.2814208865166 MULTI CID FTMS 0 0 0 13737 1479748.625 0.623037886717523 12 -0.4837875366210937 4 Unmodified _MVPEDVPRL_ ENSG00000272333|ENST00000420124|KMT2B 36.12702656103203 0.0967173616627612 3 {[VA]|[{I|L}G]}D{I|L}S{I|L}EP 8 8 47.119 0.0 0.0 4.4682 0.0 0.0 0.0 227.0844254967274 227.0844254967274 15.30008452963798 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.3252574989159953 0.0 {[VA]|[{I|L}G]}D{I|L}S{I|L}EP 4.4682 - 3932 1 1.041 230996.9 1.0 8231 5508 13737 HBL1_DMSO_200M_050219_1,13741 HBL1_DMSO_200M_050219_1,13741,MVPEDVPRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13742 68.658 21.0 1588300.0 25 0 143820.0 -1 0 34 986.4825645992212 1970.9505762652425 2 986.9871093630792 MULTI CID FTMS 0 0 0 -1 0 5 3 VV 2 -1 7.9588 0.0 0.0 0.40381 0.0 0.0 1159.492154489655 610.3007906549436 1769.7929451445984 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV 0.40381 - 25 + 1 1.041 34277.9 1.0 8232 5508 13737 HBL1_DMSO_200M_050219_1,13742 HBL1_DMSO_200M_050219_1,13742, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13743 68.661 170.0 945170.0 25 0 95015.0 + 29927 QSIVRSEPF 9 152 531.7830007541485 0 531.7834960818291 PEAK CID FTMS 0 0 0 13737 685585.5625 0.1862477514001984 -13 0.1859893798828125 6 Unmodified _QSIVRSEPF_ REV__ENSG00000123505|ENST00000368885|AMD1;REV__nc|ENSG00000123505|P17707-2|AMD1 32.78568957990786 0.0971838787772021 3 {I|L}PE 3 -1 19.922 0.0 0.0 1.8766 0.0 0.0 215.0886366406304 504.25916185898205 719.3477984996124 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}PE 1.8766 - 160 + 1 1.041 129461.0 1.0 8233 5508 13737 HBL1_DMSO_200M_050219_1,13743 HBL1_DMSO_200M_050219_1,13743,QSIVRSEPF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13744 68.665 204.0 1199000.0 25 0 117230.0 42256 VSNTFTEVLD 10 183 375.5192865794357 1123.536030338507 3 375.5197326540947 MULTI CID FTMS 0 0 0 13737 520322.21875 0.0921605208574016 -8 0.1173477172851562 7 Unmodified _VSNTFTEVLD_ ENSG00000203668|ENST00000366553|CHML 24.020572477871973 0.4289996903560794 3 {[RE]|[WV]}D{I|L}T{I|L} 6 7 39.015 0.0 0.0 3.4725 0.0 0.0 0.0 393.1035555475219 393.1035555475219 19.09501908095606 0.0 0.0 0.0 0 0.3494850021680094 0.0 1.0994850021680094 0.0 {[RE]|[WV]}D{I|L}T{I|L} 3.4725 - 784 + 1 1.041 214857.6 1.0 8234 5508 13737 HBL1_DMSO_200M_050219_1,13744 HBL1_DMSO_200M_050219_1,13744,VSNTFTEVLD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13745 68.669 204.0 1137600.0 25 0 85121.0 + 15851 ISNDEDETV 9 198 341.1481865772767 1020.42273033203 3 341.1481811404228 MULTI CID FTMS 0 0 0 13737 472441.0 0.4361398785256447 8 -0.3004684448242187 8 Unmodified _ISNDEDETV_ REV__ENST00000369489.9_1_1:117057392-117057434:-|nuORF 10.799506525563784 0.5443532743200366 3 [YG]{[SA]|[TG]}[YN]{M(Oxidation (M))|F}VT 9 -1 + 24.828 0.0 0.0 2.4331 2.4331 80.372 0.0 0.0 0.0 5.174837133936308 5.429374478339216 5.174837133936308 15.978396506218507 0 0.4247425010840047 2.0 0.0 0.0 [YG]{[SA]|[TG]}[YN]{M(Oxidation (M))|F}VT;{[SA]|[TG]}[YG][YN]{M(Oxidation (M))|F}VT;[{M(Oxidation (M))|F}V]V[C(Carbamidomethyl (C))H]{[SA]|[TG]}CV;[YG][C(Carbamidomethyl (C))N][HT][RN];[YG]{[SA]|[TG]}[C(Carbamidomethyl (C))H]G[RN] 2.4331;0.86728;0.49823;0.47702;0.40062 -;-;-;-;- 375 1 1.041 181461.5 1.0 8235 5508 13737 HBL1_DMSO_200M_050219_1,13745 HBL1_DMSO_200M_050219_1,13745,ISNDEDETV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13746 68.673 190.0 313760.0 25 0 20529.0 + 28882 QALYPVQQTI 10 94 580.8196542236984 1159.6247555141967 2 580.8201782107353 MULTI CID FTMS 0 0 0 13737 465219.78125 0.6659878559372191 -5 0.0714645385742187 9 Unmodified _QALYPVQQTI_ ENSG00000146414|ENST00000275233|SHPRH;ENST00000433355.6_1_6:146231577-146267398:-|nuORF;ENST00000519632.5_1_6:146239221-146248402:-|nuORF;ENST00000523276.1_1_6:146240471-146248402:-|nuORF;nc|ENSG00000146414|Q149N8-4|SHPRH 18.1463463914782 0.5430639438673815 3 K{I|L}M 3 9 26.198 0.0 0.0 2.2592 0.0 0.0 0.0 784.3865481723824 784.3865481723824 7.860687938974369 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}M 2.2592 - 186 + 1 1.041 52748.9 1.0 8236 5508 13737 HBL1_DMSO_200M_050219_1,13746 HBL1_DMSO_200M_050219_1,13746,QALYPVQQTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13747 68.677 224.0 622600.0 25 0 123570.0 31655 RRGGPGVL 8 127 406.24857980309577 810.4826066729916 2 406.2479736208916 MULTI CID FTMS 0 0 0 13737 356589.75 0.0226922449855442 -8 0.1173477172851562 10 Unmodified _RRGGPGVL_ ENST00000374234.1_1_9:115449830-115480332:-|nuORF;ENST00000374242.8_1_9:115478806-115480332:-|nuORF 0.7936320650641473 0.8195151834710337 3 {I|L} 1 7 10.485 0.0 0.0 1.2936 0.0 0.0 679.3871762304119 0.0 679.3871762304119 0.0 1.4501730568125917 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2936 + + 21 + 1 1.041 110440.6 1.0 8237 5508 13737 HBL1_DMSO_200M_050219_1,13747 HBL1_DMSO_200M_050219_1,13747,RRGGPGVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13748 68.681 208.0 358360.0 25 0 18663.0 + -1 TELGMKEAF 9 124 521.248632040738 1040.482711148276 2 521.2479736208916 MULTI CID FTMS 0 0 0 13737 341169.71875 0.3049363097353547 5 -0.2321701049804687 11 Oxidation (M) _TELGM(Oxidation (M))KEAF_ REV__ENSG00000177728|ENST00000314256|TMEM94;REV__ENST00000585105.5_1_17:73489877-73495164:+|nuORF;REV__nc|ENSG00000177728|Q12767-2|TMEM94;REV__nc|ENSG00000177728|Q12767-3|TMEM94 8.593279151180031 0.6146971463335029 3 A{M(Oxidation (M))|F} 2 -1 19.464 0.0 0.0 1.8707 0.0 0.0 804.4132557599625 0.0 804.4132557599625 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 A{M(Oxidation (M))|F} 1.8707 + + 102 1 1.041 61816.3 1.0 8238 5508 13737 HBL1_DMSO_200M_050219_1,13748 HBL1_DMSO_200M_050219_1,13748,TELGMKEAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13750 68.685 0.18 149910000.0 25 0 18589000.0 + 37119 TGYLNTVTV 9 57 484.25839615362605 966.502239374052 2 484.2589599490166 MULTI CID FTMS 0 0 0 13749 326055840.0 0.770431870024335 14 -0.5727462768554688 1 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 15.847184025352805 0.4077185912009129 3 {I|L}CTV 4 6 28.589 0.0 0.0 2.9579 0.0 0.0 532.2830143758084 0.0 532.2830143758084 0.0 18.015384402724592 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}CTV 2.9579 - 49 + 1 1.024 31286.5 1.0 8239 5509 13749 HBL1_DMSO_200M_050219_1,13750 HBL1_DMSO_200M_050219_1,13750,TGYLNTVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13751 68.686 3.0 12508000.0 25 0 1607400.0 22456 LPVAQVIF 8 66 443.7734746181057 885.5323963030114 2 443.7736083865166 MULTI CID FTMS 0 0 0 13749 17330350.0 0.5676147136649582 23 -1.37109375 2 Unmodified _LPVAQVIF_ ENST00000254322.2_1_19:14625909-14626227:-|nuORF 19.438996006549623 0.6237395211498085 3 {I|L}P 2 6 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3735603671694 672.3735603671694 21.13113446143053 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 66 + 1 1.024 38230.3 1.0 8240 5509 13749 HBL1_DMSO_200M_050219_1,13751 HBL1_DMSO_200M_050219_1,13751,LPVAQVIF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13752 68.687 3.2 6006700.0 25 0 344840.0 40365 VHSQYVCVG 9 58 496.2378657400438 990.4611785468876 2 496.2371703982353 MULTI CID FTMS 0 0 0 13749 12493549.0 1.0 0 0.0 3 Unmodified _VHSQYVCVG_ ENST00000369426.9_1_1:119575536-119588262:-|nuORF 5.230669730166228 0.7320841359114558 3 V 1 8 11.109 0.0 0.0 1.1216 0.0 0.0 873.3816096155384 0.0 873.3816096155384 0.0 7.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1216 + + 10 + 1 1.024 21391.5 1.0 8241 5509 13749 HBL1_DMSO_200M_050219_1,13752 HBL1_DMSO_200M_050219_1,13752,VHSQYVCVG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13753 68.688 8.9 3270000.0 25 0 468300.0 + 43601 YAFNMKATV 9 58 522.7625554766594 1043.5105580201189 2 522.7628051638603 MULTI CID FTMS 0 0 0 13749 5240832.5 0.0856291115868109 25 -1.58306884765625 4 Unmodified _YAFNMKATV_ ENSG00000109971|ENST00000534624|HSPA8 16.149105407346934 0.3995459350917656 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM 5 4 41.695 0.0 0.0 3.9956 0.0 0.0 0.0 414.2365816705688 414.2365816705688 25.22878745280337 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM 3.9956 + + 58 + 1 1.024 28586.2 1.0 8242 5509 13749 HBL1_DMSO_200M_050219_1,13753 HBL1_DMSO_200M_050219_1,13753,YAFNMKATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13754 68.691 101.0 1229700.0 25 0 93470.0 + -1 MPFRGDTVI 9 137 518.2680091404494 1034.5214653476987 2 518.2676269412041 MULTI CID FTMS 0 0 0 13749 2245977.75 0.198260389088544 23 -1.37109375 5 Acetyl (Protein N-term) _(Acetyl (Protein N-term))FFHSLMVI_ ENSG00000141556|ENST00000355528|TBCD;nc|ENSG00000141556|Q9BTW9-4|TBCD;ENST00000571796.5_1_17:80869637-80887508:+|nuORF;nc|ENSG00000141556|Q9BTW9-5|TBCD 26.34127834903884 0.4900704351052977 3 {[TV]|[{I|L}S]}WWTMV{I|L} 8 -1 + 36.934 0.0 0.0 3.5701 3.5701 69.451 0.0 0.0 0.0 0.915149811213496 21.449106239739635 0.915149811213496 0.796896906561031 0 0.3807196863200844 0.8239087409443188 0.805462187404089 0.0 {[TV]|[{I|L}S]}WWTMV{I|L};{[TV]|[{I|L}S]}WWMTV{I|L};[Q{I|L}]{M(Oxidation (M))|F}[PS]TMV{I|L};[Q{I|L}]{M(Oxidation (M))|F}[PS]MTV{I|L};{[TV]|[{I|L}S]}{[MG]|[TS]}[PS]TMV{I|L};{[TV]|[{I|L}S]}{[MG]|[TS]}[PS]MTV{I|L};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[DA]|[EG]}TV{I|L};{[TV]|[{I|L}S]}WWTVM{I|L};[Q{I|L}]{M(Oxidation (M))|F}{[RE]|[WV]}MV{I|L};{[TV]|[{I|L}S]}{[MG]|[TS]}{[RE]|[WV]}MV{I|L} 3.5701;3.4931;3.1089;3.0319;2.7243;2.6472;2.5536;2.4887;2.4827;2.0928 -;-;-;-;-;-;-;-;-;- 684 1 1.024 96889.9 1.0 8243 5509 13749 HBL1_DMSO_200M_050219_1,13754 HBL1_DMSO_200M_050219_1,13754,FFHSLMVI False False MPFRGDTVI 68.69067 518.267626941204 95759608.0 13749.0 ENSG00000141556|ENST00000355528|TBCD;;nc|ENSG00000141556|Q9BTW9-4|TBCD;;ENST00000571796.5_1_17:80869637-80887508:+|nuORF;;nc|ENSG00000141556|Q9BTW9-5|TBCD 1.3244685133298235 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13755 68.693 114.0 1077400.0 25 0 209680.0 + 39204 TYSEFAREL 9 110 558.2720067651649 0 558.2715331912041 PEAK CID FTMS 0 0 0 13749 1720322.375 0.2410729005872038 25 -1.58306884765625 6 Unmodified _TYSEFAREL_ nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1 33.4449034751529 0.0939430949041602 3 YSE{M(Oxidation (M))|F}KP 6 5 42.652 0.0 0.0 3.8269 0.0 0.0 101.04039917310465 259.1095369928344 360.14993616593904 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 YSE{M(Oxidation (M))|F}KP 3.8269 - 195 + 1 1.024 93774.6 1.0 8244 5509 13749 HBL1_DMSO_200M_050219_1,13755 HBL1_DMSO_200M_050219_1,13755,TYSEFAREL True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13756 68.696 142.0 647760.0 25 0 28851.0 -1 0 106 873.4185370560829 1744.8225211789656 2 873.9162475466728 MULTI CID FTMS 0 0 0 13749 1361497.625 0.5626061603312584 -7 0.1197738647460937 7 3 [MN]P[HV]RQAEN{I|L}NP[EP] 15 -1 + 66.217 0.0 0.0 3.7951 3.7951 69.638 0.0 0.0 0.0 0.5487943066195413 0.5487943066195413 0.5487943066195413 0.5487943066195413 0 0.0 1.5228787452803376 0.3494850021680094 1.0994850021680094 [MN]P[HV]RQAEN{I|L}NP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}NEAQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{I|L}Q;[NP]M[HV]RQAEN{I|L}NP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}NEAQ[YQ][{I|L}A]{I|L}Q;[MN]P[HV]RQAEN{I|L}D[PA][PG];[MN]P[HV]RQAEN{I|L}NV[HS];[MN]P[HV][VG]QAEN{I|L}NP[EP];[MN]P[HV]R[AG]AEN{I|L}NP[EP];[MN]P[HV]RQAEN{I|L}GGP[EP];[MN]P[HV]RQAEGG{I|L}NP[EP] 3.7951;3.7636;3.7235;3.4902;3.3075;3.2782;3.2775;3.2775;3.2775;3.2775 -;-;-;-;-;-;-;-;-;- 1532 1 1.024 66155.4 1.0 8245 5509 13749 HBL1_DMSO_200M_050219_1,13756 HBL1_DMSO_200M_050219_1,13756, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13757 68.699 156.0 414890.0 25 0 19316.0 -1 0 101 662.9788907377349 1985.9148428134044 3 662.9799682497978 MULTI CID FTMS 0 0 0 13749 933159.9375 1.0 0 0.0 8 3 C{[TV]|[{I|L}S]} 3 -1 8.741 0.0 0.0 0.44015 0.0 0.0 1664.7817287722396 0.0 1664.7817287722396 0.0 1.7512841890908266 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 C{[TV]|[{I|L}S]} 0.44015 - 224 + 1 1.024 53622.9 1.0 8246 5509 13749 HBL1_DMSO_200M_050219_1,13757 HBL1_DMSO_200M_050219_1,13757, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13758 68.701 62.0 768940.0 25 0 47129.0 27025 PEMMKYGR 8 92 506.2403858214532 1010.4662187097064 2 506.2407409548759 MULTI CID FTMS 0 0 0 13749 955134.3125 1.0 0 0.0 9 Unmodified _PEMMKYGR_ ENST00000553480.1_1_14:45334525-45334813:-|nuORF 9.347437153973935 0.7675937258251505 3 V 1 8 13.099 0.0 0.0 1.2963 0.0 0.0 893.3866802959354 0.0 893.3866802959354 0.0 1.6789605096159654 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2963 - 90 + 1 1.024 42074.8 1.0 8247 5509 13749 HBL1_DMSO_200M_050219_1,13758 HBL1_DMSO_200M_050219_1,13758,PEMMKYGR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13759 68.704 159.0 1393500.0 25 0 133590.0 29969 QSVIFLFVI 9 153 533.3222697037077 1064.6299864742152 2 533.3218871951103 MULTI CID FTMS 0 0 0 13749 839032.3125 1.0 0 0.0 10 Unmodified _QSVIFLFVI_ ENSG00000154263|ENST00000690296|ABCA10;ENST00000515578.5_1_4:420284-429666:-|nuORF;ENST00000519732.5_1_17:67144970-67171813:-|nuORF;ENST00000522406.5_1_17:67144970-67178294:-|nuORF;nc|ENSG00000154263|Q8WWZ4-2|ABCA10 15.847184025352805 0.4077185912009129 3 {[QS]|[NT]}VTV[HN]AV 9 6 66.574 0.0 0.0 6.2533 0.0 0.0 0.0 126.13258592173396 126.13258592173396 43.40891916597384 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.6861818737241734 1.083839506110969 {[QS]|[NT]}VTV[HN]AV 6.2533 - 1415 1 1.024 183996.4 1.0 8248 5509 13749 HBL1_DMSO_200M_050219_1,13759 HBL1_DMSO_200M_050219_1,13759,QSVIFLFVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13760 68.708 227.0 515580.0 25 0 41603.0 + 36259 SYFDRYRDSF 10 106 452.5386194778347 1354.594029033704 3 452.8736755251884 MULTI CID FTMS 0 0 0 13749 505109.6875 1.0 0 0.0 11 Unmodified _SYFDRYRDSF_ ENSG00000124160|ENST00000290231|NCOA5 22.65808497894818 0.4596126414678359 3 SY{M(Oxidation (M))|F}DR{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TV 11 4 + 61.89 0.0 0.0 4.5689 4.5689 76.868 0.0 0.0 0.0 46.087904439190446 3.345629406670305 3.345629406670305 3.5340874929963704 0 0.3494850021680094 2.0 0.25 0.4247425010840047 SY{M(Oxidation (M))|F}DR{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TV;SY{M(Oxidation (M))|F}DR{[ES]|[DT]|[{I|L}C]}[HD]TV;SY{M(Oxidation (M))|F}DR{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L};SY{M(Oxidation (M))|F}DKGN{[QS]|[NT]}Y{M(Oxidation (M))|F};SY{M(Oxidation (M))|F}DR{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WT]|[RM]}{M(Oxidation (M))|F};SY{M(Oxidation (M))|F}DR{[ES]|[DT]|[{I|L}C]}[HD]S{I|L};SY{M(Oxidation (M))|F}DR{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{M(Oxidation (M))|F}T]SV;SY{M(Oxidation (M))|F}D[W{I|L}]{[QS]|[NT]}Y{M(Oxidation (M))|F};SY{M(Oxidation (M))|F}DR{[ES]|[DT]|[{I|L}C]}{[YC]|[HE]}SV;SY{M(Oxidation (M))|F}D[TP]EE[PA]TV 4.5689;4.308;4.2972;4.1946;4.1211;4.0363;3.9827;3.7351;3.7218;3.5607 -;-;-;-;-;-;-;-;-;- 910 + 1 1.024 94197.0 1.0 8249 5509 13749 HBL1_DMSO_200M_050219_1,13760 HBL1_DMSO_200M_050219_1,13760,SYFDRYRDSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13761 68.712 209.0 417290.0 25 0 82461.0 -1 0 84 901.4198542545744 1800.8251555759484 2 901.9210082888604 MULTI CID FTMS 0 0 0 13749 382728.5625 0.9129091223647756 -6 0.1055221557617187 12 3 [NP]{I|L}N[VP]GPEEAN 12 -1 23.822 0.0 0.0 1.3229 0.0 0.0 0.0 566.2401841199984 566.2401841199984 4.09765299137284 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}N[VP]GPEEAN 1.3229 - 1262 1 1.024 63623.1 1.0 8250 5509 13749 HBL1_DMSO_200M_050219_1,13761 HBL1_DMSO_200M_050219_1,13761, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13762 68.716 196.0 298540.0 25 0 23393.0 + 28791 PYLWRQYL 8 105 569.8062864252672 1137.5980199173343 2 570.3088256716728 MULTI CID FTMS 0 0 0 13749 415077.9375 0.8141223958874435 -6 0.1055221557617187 13 Unmodified _PYLWRQYL_ REV__ENSG00000049656|ENST00000320895|CLPTM1L;REV__ENST00000506641.5_1_5:1318486-1326363:-|nuORF;REV__nc|ENSG00000049656|Q96KA5-2|CLPTM1L 11.114462752807354 0.7467182956244686 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P 4 -1 31.427 0.0 0.0 2.7625 0.0 0.0 0.0 664.3220243941499 664.3220243941499 19.20818753952375 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P 2.7625 - 86 1 1.024 52139.4 1.0 8251 5509 13749 HBL1_DMSO_200M_050219_1,13762 HBL1_DMSO_200M_050219_1,13762,PYLWRQYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13764 68.72 123.0 899270.0 25 0 33838.0 -1 RCHRRRRRCCC 11 110 866.9067123982009 1731.7988718632016 2 867.4067870974541 MULTI CID FTMS 0 0 0 13763 489206.28125 0.0271851042462009 33 -2.3451080322265625 1 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 3 [NP]{I|L}NA[QP]QDAD{[QV]|[N{I|L}]|[RA]|[KV]}P[EP] 16 -1 + 72.367 0.0 0.0 4.1787 4.1787 72.511 0.0 0.0 0.0 11.924712680444358 44.333975425929 11.924712680444358 1.7486502786740488 0 0.0 0.9208187539523752 0.805462187404089 0.7302046884880937 [NP]{I|L}NA[QP]QDAD{[QV]|[N{I|L}]|[RA]|[KV]}P[EP];[NP]{I|L}NA[QP]QDAY{I|L}Y[EP];[NP]{I|L}NA[QP]QDAN{I|L}DP[EP];[NP]{I|L}NMRHDAD{[QV]|[N{I|L}]|[RA]|[KV]}P[EP];[NP]{I|L}NA[QP]QD[HN]{I|L}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NA[QP]QD[HN]{I|L}{M(Oxidation (M))|F}[QP];[NP]{I|L}NMRHDAY{I|L}Y[EP];[NP]{I|L}{I|L}[C(Carbamidomethyl (C))H]QDAD{[QV]|[N{I|L}]|[RA]|[KV]}P[EP];[NP]{I|L}NA[QP][AG]DAY{I|L}Y[EP];[NP]{I|L}GGA[QP]QDAY{I|L}Y[EP] 4.1787;4.0777;3.8425;3.6878;3.6642;3.592;3.588;3.5714;3.5563;3.5563 -;-;-;-;-;-;-;-;-;- 3775 1 1.024 79722.0 1.0 8252 5510 13763 HBL1_DMSO_200M_050219_1,13764 HBL1_DMSO_200M_050219_1,13764,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13765 68.723 147.0 835560.0 25 0 116440.0 9516 FLEGIVNGKI 10 153 545.316766575885 1088.61898021857 2 545.3174316287041 MULTI CID FTMS 0 0 0 13763 369328.375 0.2429105358954052 8 -0.3143081665039062 2 Unmodified _FLEGIVNGKI_ ENSG00000180332|ENST00000379108|KCTD4 10.073929032068715 0.6785112666868882 3 {[QN]|[E{I|L}]|[KN]}W 3 8 18.996 0.0 0.0 1.745 0.0 0.0 0.0 657.3868994903074 657.3868994903074 6.777807052660808 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 {[QN]|[E{I|L}]|[KN]}W 1.745 - 306 1 1.024 97621.6 1.0 8253 5510 13763 HBL1_DMSO_200M_050219_1,13765 HBL1_DMSO_200M_050219_1,13765,FLEGIVNGKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13766 68.726 157.0 1273100.0 25 0 228630.0 -1 0 101 322.21066928674946 642.406785640299 2 322.2105590701103 MULTI CID FTMS 0 0 0 13763 1087836.125 0.2836199410422269 -3 0.0895538330078125 3 3 E{I|L}{I|L}R{I|L} 5 -1 + 60.802 0.0 0.0 9.4647 9.4647 85.162 0.0 0.0 0.0 29.744237387763093 1.4612803567823818 1.4612803567823818 1.4612803567823818 0 0.0 1.5228787452803376 0.0 0.7614393726401688 E{I|L}{I|L}R{I|L};E{I|L}{I|L}{I|L}R 9.4647;9.2372 -;- 49 + 1 1.024 162905.3 1.0 8254 5510 13763 HBL1_DMSO_200M_050219_1,13766 HBL1_DMSO_200M_050219_1,13766, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13767 68.73 186.0 647630.0 25 0 36718.0 + 29598 QLVEQVEQI 9 156 543.2965522167204 1084.5785515002408 2 543.2947875857353 MULTI CID FTMS 0 0 0 13763 604587.25 0.7724619061228496 1 -0.0185775756835937 4 Unmodified _QLVEQVEQI_ ENSG00000184840|ENST00000332598|TMED9;ENST00000507723.1_1_5:177021070-177022414:+|nuORF;ENST00000513799.5_1_5:177019550-177022414:+|nuORF 103.74828524460852 0.0090107942103208 3 [Q{I|L}]D{I|L}QVEQ{I|L} 9 2 + 80.507 0.0 0.0 7.4229 7.4229 86.685 0.0 0.0 0.0 4.254895170699825 7.1919646325935815 4.254895170699825 4.254895170699825 0 0.5044321917401079 1.0457574905606752 2.079689690656103 1.3116042352767734 [Q{I|L}]D{I|L}QVEQ{I|L};[AG]{I|L}D{I|L}QVEQ{I|L};[Q{I|L}]VEQVEQ{I|L};{[QN]|[E{I|L}]|[KN]}N{I|L}QVEQ{I|L};{[QN]|[E{I|L}]|[KN]}GG{I|L}QVEQ{I|L};[Q{I|L}]D{I|L}[AG]VEQ{I|L};[AG]EV{I|L}QVEQ{I|L};[Q{I|L}]DQ{I|L}VEQ{I|L};[Q{I|L}]G{I|L}GEVEQ{I|L};[AG]{I|L}DQ{I|L}VEQ{I|L} 7.4229;7.0306;6.9424;6.9408;6.6211;6.5739;6.5202;6.4156;6.3142;6.2895 -;-;+;-;-;-;-;-;-;- + 3513 1 1.024 97354.1 1.0 8255 5510 13763 HBL1_DMSO_200M_050219_1,13767 HBL1_DMSO_200M_050219_1,13767,QLVEQVEQI True True QLVEQVEQI 68.729762 543.294787585735 6807543.0 13763.0 ENSG00000184840|ENST00000332598|TMED9;;ENST00000513799.5_1_5:177019550-177022414:+|nuORF;;ENST00000507723.1_1_5:177021070-177022414:+|nuORF 3.5870725313822427 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13768 68.734 243.0 462290.0 25 0 29259.0 + 32115 RVMEEIRNLTV 11 119 453.918361679404 1358.7332556384122 3 453.9182617068291 MULTI CID FTMS 0 0 0 13763 277078.34375 0.488299759917409 12 -0.5102691650390625 5 Unmodified _RVMEEIRNLTV_ ENSG00000066136|ENST00000447388|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 39.21299971606389 0.2245192836502623 3 [RV]MEE[R{I|L}]N{I|L}TV 11 0 + 53.804 0.0 0.0 3.9599 3.9599 70.867 0.0 0.0 0.0 1.03463889745381 1.03463889745381 1.03463889745381 1.03463889745381 0 0.5 0.0 0.3807196863200844 0.3807196863200844 + + [RV]MEE[R{I|L}]N{I|L}TV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}N[R{I|L}]EE[PA]TV;{[TV]|[{I|L}S]}[VS]EE[R{I|L}]N{I|L}TV;{[ET]|[MV]}REE[R{I|L}]N{I|L}TV;[RV]MEE[R{I|L}]GG{I|L}TV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}N[R{I|L}]EE[PA]S{I|L};{[ET]|[MV]}REE[R{I|L}]GG{I|L}TV;[RV]MEE[R{I|L}][KA]EV;{[{M(Oxidation (M))|F}C]|[YS]}[HK]E[R{I|L}]N{I|L}TV;[K{I|L}][C(Carbamidomethyl (C))N]E[R{I|L}]N{I|L}TV 3.9599;3.8837;3.6729;3.4912;3.2881;3.1121;2.8194;2.3748;2.3583;2.287 +;-;-;-;-;-;-;-;-;- + 524 1 1.024 93692.4 1.0 8256 5510 13763 HBL1_DMSO_200M_050219_1,13768 HBL1_DMSO_200M_050219_1,13768,RVMEEIRNLTV False True RVMEEIRNLTV 68.734293 453.918261706829 4499161.0 13763.0 ENSG00000066136|ENST00000447388|NFYC;;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC;;NFYC|p.R39Q|1|0.44|ENSG00000066136|chr1:40747544-40747544|G/A|missense_variant;;nc|ENSG00000066136|Q13952-5|NFYC;;ENST00000424419.6_1_1:41157373-41232429:+|nuORF 6.254747708638509 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13770 68.743 387.0 591400.0 25 0 111440.0 + 32525 SALPYVNNV 9 102 976.5092920196788 975.5020155530788 1 976.5089599490166 MULTI CID FTMS 0 0 0 13769 379386.9375 0.1744677349466099 -10 0.1849288940429687 1 Unmodified _SALPYVNNV_ ENSG00000166986|ENST00000262027|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF;nc|ENSG00000166986|P56192-2|MARS1 126.56589448801844 0.0036077350702044 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VSA{I|L}NNV 9 6 + 72.718 0.0 0.0 7.4544 7.4544 84.125 0.0 0.0 0.0 16.938200260161125 12.498774732165998 12.498774732165998 2.5134875797167666 0 0.4247425010840047 1.6989700043360187 0.9604093769761876 0.805462187404089 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VSA{I|L}NNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}ASVNNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[TA]VNNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VSA{I|L}NGGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[SA]|[TG]}{I|L}VNNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}ASVNGGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[TA]VNGGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VSA{I|L}GGNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[SA]|[TG]}V{I|L}NNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GTNNV 7.4544;7.1968;7.1772;6.5105;6.3795;6.2528;6.2333;6.1202;5.969;5.9632 -;-;-;-;-;-;-;-;-;- 6823 1 1.024 149336.9 1.0 8257 5511 13769 HBL1_DMSO_200M_050219_1,13770 HBL1_DMSO_200M_050219_1,13770,SALPYVNNV True True SALPYVNNV 68.743112 976.508959949017 32248340.0 13769.0 nc|ENSG00000166986|P56192-2|MARS1;;ENST00000447721.6_1_12:57881873-57905922:+|nuORF;;ENSG00000166986|ENST00000262027|MARS1 10.643045743306478 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13771 68.748 241.0 649440.0 25 0 40556.0 + 34273 SLQRGTGLTV 10 190 516.2968084034844 1030.5790638737687 2 516.2962524294853 MULTI CID FTMS 0 0 0 13769 704110.125 0.1574529098795752 -15 0.2531661987304687 2 Unmodified _SLQRGTGLTV_ REV__ENSG00000175164|ENST00000538324|ABO;REV__nc|ENSG00000175164|P16442|ABO 36.12702656103203 0.1984647928738587 3 [{I|L}A]GPNTTND 9 -1 28.684 0.0 0.0 2.7833 0.0 0.0 0.0 144.14507884863124 144.14507884863124 12.55146294749645 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.6643943297944485 0.5242275032520141 [{I|L}A]GPNTTND 2.7833 - 1987 1 1.024 122380.5 1.0 8258 5511 13769 HBL1_DMSO_200M_050219_1,13771 HBL1_DMSO_200M_050219_1,13771,SLQRGTGLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13772 68.754 368.0 450300.0 25 0 31409.0 -1 0 98 1024.4852239332974 2046.9558949333948 2 1024.487231433392 MULTI CID FTMS 0 0 0 13769 301613.4375 0.8634434859405042 -1 0.0185775756835937 3 3 {[QS]|[NT]}{I|L}S{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V 7 -1 28.689 0.0 0.0 1.4015 0.0 0.0 0.0 1295.5553075039213 1295.5553075039213 8.963694452602475 0.0 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.9247425010840048 {[QS]|[NT]}{I|L}S{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V 1.4015 - 2689 1 1.024 111570.7 1.0 8259 5511 13769 HBL1_DMSO_200M_050219_1,13772 HBL1_DMSO_200M_050219_1,13772, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13773 68.761 364.0 835480.0 25 0 136640.0 39929 VFSTNSFQ 8 205 465.22399988200345 0 465.2238036990166 PEAK CID FTMS 0 0 0 13769 236346.71875 0.7660211932906583 7 -0.2957305908203125 4 Unmodified _VFSTNSFQ_ nc|ENSG00000260565|Q9NX77|ERVK13-1 36.12702656103203 0.1753113530223663 3 TN{I|L}Y 4 6 29.457 0.0 0.0 3.1727 0.0 0.0 279.1252936099069 155.04685388736564 434.1721474972726 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.805462187404089 TN{I|L}Y 3.1727 - 514 + 1 1.024 229393.4 1.0 8260 5511 13769 HBL1_DMSO_200M_050219_1,13773 HBL1_DMSO_200M_050219_1,13773,VFSTNSFQ False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13774 68.768 402.0 181350.0 25 0 15000.0 -1 0 69 1028.975756824017 0 1028.975756824017 PEAK CID FTMS 0 0 0 -1 0 5 3 NTVEQ 5 -1 30.191 0.0 0.0 1.4685 0.0 0.0 1109.499252815867 372.15818201236567 1481.657434828233 0.0 0.0 0.0 0.0 0 0.0 0.0 0.975772496747986 0.0 NTVEQ 1.4685 - 300 + 1 1.024 54818.0 1.0 8261 5511 13769 HBL1_DMSO_200M_050219_1,13774 HBL1_DMSO_200M_050219_1,13774, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13775 68.776 421.0 157190.0 25 0 38507.0 -1 0 54 1036.462207019329 0 1036.462207019329 PEAK CID FTMS 0 0 0 -1 0 6 3 WTVT 4 -1 17.841 0.0 0.0 0.8615 0.0 0.0 1053.4033436267457 527.2274874322874 1580.630831059033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.0 WTVT 0.8615 - 42 + 1 1.024 52537.1 1.0 8262 5511 13769 HBL1_DMSO_200M_050219_1,13775 HBL1_DMSO_200M_050219_1,13775, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13776 68.783 429.0 195030.0 25 0 22926.0 -1 0 90 1043.456469714642 0 1043.456469714642 PEAK CID FTMS 0 0 0 -1 0 7 3 VTAKMYA 7 -1 27.598 0.0 0.0 1.3237 0.0 0.0 1059.3893055408091 258.0881441705688 1317.477449711378 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.6139829889124311 VTAKMYA 1.3237 - 512 + 1 1.024 57564.4 1.0 8263 5511 13769 HBL1_DMSO_200M_050219_1,13776 HBL1_DMSO_200M_050219_1,13776, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13777 68.79 365.0 374280.0 25 0 31751.0 -1 DAEEMKVCV 9 174 540.7394566581046 0 540.7387573122978 PEAK CID FTMS 0 0 0 13769 182200.890625 0.500809525298385 -1 0.0185775756835937 8 Carbamidomethyl (C) _DAEEMKVC(Carbamidomethyl (C))V_ ENST00000460377.1_2:149835462-149853923:+|nuORF 12.531546534597751 0.2832320739326029 3 {I|L}ED 3 -1 13.333 0.0 0.0 1.2351 0.0 0.0 316.1739604936569 403.11472498111567 719.2886854747726 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.0 {I|L}ED 1.2351 - 584 + 1 1.024 110409.7 1.0 8264 5511 13769 HBL1_DMSO_200M_050219_1,13777 HBL1_DMSO_200M_050219_1,13777,DAEEMKVCV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13779 68.795 53.0 1350300.0 25 0 58031.0 -1 0 73 993.965065881034 1985.915578828868 2 994.4661743044852 MULTI CID FTMS 0 0 0 13778 2122269.75 0.9706745582265532 -2 0.0742111206054687 1 3 VTN{I|L} 4 -1 33.844 0.0 0.0 1.7042 0.0 0.0 1237.5394506835703 318.1105135553344 1555.6499642389049 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.805462187404089 VTN{I|L} 1.7042 - 390 + 1 1.033 54304.8 1.0 8265 5512 13778 HBL1_DMSO_200M_050219_1,13779 HBL1_DMSO_200M_050219_1,13779, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13780 68.799 237.0 1130000.0 25 0 129290.0 38979 TVPWLRDL 8 215 500.2833317178364 998.5521105024728 2 500.2834655642509 MULTI CID FTMS 0 0 0 13778 643876.625 0.1290584146324963 -9 0.2145767211914062 2 Unmodified _TVPWLRDL_ ENSG00000136002|ENST00000409359|ARHGEF4 18.13498045792455 0.6430038125133779 3 [{I|L}T]Q{I|L}V{M(Oxidation (M))|F}{I|L} 7 5 22.62 0.0 0.0 2.2653 0.0 0.0 0.0 181.0450053601477 181.0450053601477 6.968334105340105 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.298455006504028 0.6694451763165201 [{I|L}T]Q{I|L}V{M(Oxidation (M))|F}{I|L} 2.2653 - 3535 1 1.033 201185.5 1.0 8266 5512 13778 HBL1_DMSO_200M_050219_1,13780 HBL1_DMSO_200M_050219_1,13780,TVPWLRDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13781 68.802 129.0 1972800.0 25 0 254350.0 + + -1 SQLPESFRV 9 181 531.720498071436 0 531.7195922732353 PEAK CID FTMS 0 0 0 -1 0 3 Oxidation (M) _NTLHM(Oxidation (M))CVND_ ENSG00000105851|ENST00000496166|PIK3CG 15.847184025352805 0.2451986057151378 3 {I|L}PN{[HG]|PP}{I|L}D 7 -1 23.744 0.0 0.0 2.237 0.0 0.0 214.9644911020132 97.04136072330311 312.00585182531626 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0807808920067157 0.6861818737241735 {I|L}PN{[HG]|PP}{I|L}D 2.237 - 259 + 1 1.033 194119.5 1.0 8267 5512 13778 HBL1_DMSO_200M_050219_1,13781 HBL1_DMSO_200M_050219_1,13781,NTLHMCVND False False SQLPESFRV 68.80162 531.719592273235 47434984.0 13778.0 ENSG00000105851|ENST00000496166|PIK3CG 4.72259537378947 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13782 68.809 407.0 304160.0 25 0 13740.0 -1 0 92 1038.968798816204 0 1038.968798816204 PEAK CID FTMS 0 0 0 -1 0 4 3 TEV{I|L}{I|L}EV 7 -1 30.961 0.0 0.0 1.4915 0.0 0.0 1056.3608021228397 233.1055697076781 1289.4663718305176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TEV{I|L}{I|L}EV 1.4915 - 924 + 1 1.033 82662.4 1.0 8268 5512 13778 HBL1_DMSO_200M_050219_1,13782 HBL1_DMSO_200M_050219_1,13782, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13783 68.816 420.0 1404800.0 25 0 88855.0 + 34885 SQHPVTVVYIE 11 197 424.5583784215215 1270.6533058647644 3 424.5583679080009 MULTI CID FTMS 0 0 0 13778 321707.46875 0.2415542221075923 26 -1.8045501708984373 5 Unmodified _SQHPVTVVYIE_ REV__ENST00000572275.1_1_17:7826422-7827118:-|nuORF 20.41088430110776 0.6105771140609675 3 {[SA]|[TG]}Y{I|L}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{M(Oxidation (M))|F}PE 11 -1 + 53.656 0.0 0.0 4.2227 4.2227 73.402 0.0 0.0 0.0 6.870221870873699 3.890286487763405 3.890286487763405 2.0969159039638896 0 0.4247425010840047 1.3010299956639813 0.7249073637206093 0.0 {[SA]|[TG]}Y{I|L}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{M(Oxidation (M))|F}PE;{[SA]|[TG]}G{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Y{M(Oxidation (M))|F}PE;{[SA]|[TG]}G{I|L}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{M(Oxidation (M))|F}PE;{[SA]|[TG]}G{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{I|L}{M(Oxidation (M))|F}PE;{[SA]|[TG]}Y{I|L}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}PE;[YG]T{I|L}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{M(Oxidation (M))|F}PE;{[SA]|[TG]}G{I|L}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}PE;{[SA]|[TG]}G{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F}{I|L}PE;{[QS]|[NT]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Y{M(Oxidation (M))|F}PE;{[SA]|[TG]}G{I|L}{[TV]|[{I|L}S]}[HT]{I|L}{M(Oxidation (M))|F}PE 4.2227;4.0577;3.9988;3.9226;3.8472;3.682;3.6233;3.5471;3.5356;3.527 -;-;-;-;-;-;-;-;-;- 10341 1 1.033 459017.5 1.0 8269 5512 13778 HBL1_DMSO_200M_050219_1,13783 HBL1_DMSO_200M_050219_1,13783,SQHPVTVVYIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13784 68.823 371.0 394600.0 25 0 52078.0 + 4471 DAYALNHTLSV 11 150 602.3037908596431 1202.593028786086 2 602.3051025271416 MULTI CID FTMS 0 0 0 13778 328481.5625 0.0241362618422196 -9 0.2145767211914062 6 Unmodified _DAYALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 94.90867108109512 0.0004917860609384 3 [HN]T{I|L}A{I|L}YWW 9 10 + 55.601 0.0 0.0 4.6234 4.6234 72.408 0.0 0.0 0.0 3.0102999566398125 7.532059605518313 3.0102999566398125 0.7918124604762511 0 0.5 0.0 1.8539171939081167 0.0 [HN]T{I|L}A{I|L}YWW;[HN]{I|L}TA{I|L}YWW;[HT]N{I|L}A{I|L}YWW;[HN]T{I|L}AYW{I|L}W;[HN]T{I|L}AY{I|L}WW;[HN]{I|L}TAYW{I|L}W;[HN]{I|L}TAY{I|L}WW;[HT]N{I|L}AYW{I|L}W;[HT]N{I|L}AY{I|L}WW;[{I|L}T][HN]A{I|L}YWW 4.6234;4.5576;4.3731;4.3471;4.2845;4.2813;4.2187;4.0968;4.0342;3.9587 -;-;-;-;-;-;-;-;-;- 9159 1 1.033 108547.8 1.0 8270 5512 13778 HBL1_DMSO_200M_050219_1,13784 HBL1_DMSO_200M_050219_1,13784,DAYALNHTLSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13785 68.831 465.0 347440.0 25 0 122260.0 -1 0 65 1187.8057213000716 3560.3953345004147 3 1188.138598620892 MULTI CID FTMS 0 0 0 13778 287345.90625 0.1716954668479548 -4 0.1431121826171875 7 3 GYW{M(Oxidation (M))|F}RT 6 -1 27.428 0.0 0.0 0.77036 0.0 0.0 2018.704010530632 728.3337622345672 2747.037772765199 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 GYW{M(Oxidation (M))|F}RT 0.77036 - 273 + 1 1.033 131039.8 1.0 8271 5512 13778 HBL1_DMSO_200M_050219_1,13785 HBL1_DMSO_200M_050219_1,13785, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13786 68.84 472.0 251560.0 25 0 47313.0 -1 0 64 1096.461420544231 3286.3624322328933 3 1096.459033191204 MULTI CID FTMS 0 0 0 13778 229217.984375 0.8954112795830043 -1 0.055633544921875 8 3 G 1 -1 6.9897 0.0 0.0 0.21269 0.0 0.0 1799.6267887776182 1426.6878833162405 3226.3146720938585 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21269 - 47 + 1 1.033 103888.0 1.0 8272 5512 13778 HBL1_DMSO_200M_050219_1,13786 HBL1_DMSO_200M_050219_1,13786, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13787 68.847 426.0 166570.0 25 0 13869.0 + -1 SLICSTMQFY 10 140 604.7672607302666 0 604.7672607302666 PEAK CID FTMS 0 0 0 -1 0 9 Oxidation (M) _SLICSTM(Oxidation (M))QFY_ REV__ENSG00000146147|ENST00000502396|MLIP;REV__ENST00000511744.1_1_6:53976250-54068425:+|nuORF 10.823927491677226 0.3685635357628707 3 K{I|L} 2 -1 7.9588 0.0 0.0 0.6591 0.0 0.0 625.2165913401647 338.1007174127563 963.317308752921 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L} 0.6591 - 135 + 1 1.033 54323.6 1.0 8273 5512 13778 HBL1_DMSO_200M_050219_1,13787 HBL1_DMSO_200M_050219_1,13787,SLICSTMQFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13788 68.856 471.0 69054.0 25 0 2605.3 + -1 VQVWRFCRACF 11 83 736.3577758669853 0 736.3577758669853 PEAK CID FTMS 0 0 0 -1 0 10 Carbamidomethyl (C) _VQVWRFC(Carbamidomethyl (C))RACF_ REV__ENST00000560078.1_1_15:41105856-41106320:+|nuORF 3.2813086475875832 0.4761840153648598 3 {I|L}NAD 4 -1 10.438 0.0 0.0 0.70974 0.0 0.0 436.2218250720581 618.2690523736936 1054.4908774457515 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}NAD 0.70974 - 72 + 1 1.033 30338.3 1.0 8274 5512 13778 HBL1_DMSO_200M_050219_1,13788 HBL1_DMSO_200M_050219_1,13788,VQVWRFCRACF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13789 68.865 458.0 241460.0 25 0 18788.0 + 36260 SYFDRYRDSF 10 137 678.3054687380791 0 678.3054687380791 PEAK CID FTMS 0 0 0 -1 0 11 Unmodified _SYFDRYRDSF_ ENSG00000124160|ENST00000290231|NCOA5 12.240655878213236 0.3578162629684178 3 CPMKVV 6 10 9.8481 0.0 0.0 0.72702 0.0 0.0 512.1930901994457 182.0572908990844 694.25038109853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 CPMKVV 0.72702 - 1021 + 1 1.033 84174.8 1.0 8275 5512 13778 HBL1_DMSO_200M_050219_1,13789 HBL1_DMSO_200M_050219_1,13789,SYFDRYRDSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13790 68.872 364.0 605780.0 25 0 58718.0 + 13979 HYYDSTIEL 9 197 570.7641274571915 1139.513701981183 2 570.7633544802666 MULTI CID FTMS 0 0 0 13778 120390.15625 0.0316606323992069 -11 0.2405624389648437 12 Unmodified _HYYDSTIEL_ ENSG00000100453|ENST00000216341|GZMB;ENST00000526004.1_1_14:25101006-25102204:-|nuORF 97.07464715276576 0.0121042244793311 3 {[WN]|[YH]}YDST{I|L}E{I|L} 9 0 + 85.16 0.0 0.0 7.4734 7.4734 95.116 0.0 0.0 0.0 21.760912590556813 14.973024840566469 14.973024840566469 21.760912590556813 0 1.055462187404089 1.154901959985743 1.75 0.3494850021680094 + + {[WN]|[YH]}YDST{I|L}E{I|L};[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))G]|[NC]}DST{I|L}E{I|L};{[WN]|[YH]}YD[WP]{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}[HC]T{I|L}{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}E{I|L}CC{I|L}{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}E{[CA]|SS}Y{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{[WN]|[YH]}CC{I|L}{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))G]|[NC]}D[WP]{M(Oxidation (M))|F}{I|L};[VG]{[C(Carbamidomethyl (C))E]|[WC]}[YG]T{I|L}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y[HC]T{I|L}{M(Oxidation (M))|F}{I|L} 7.4734;5.5637;5.0894;4.6174;4.4417;4.1999;3.7916;3.175;3.0284;2.9442 +;-;-;-;-;-;-;-;-;- + 1747 1 1.033 165989.3 1.0 8276 5512 13778 HBL1_DMSO_200M_050219_1,13790 HBL1_DMSO_200M_050219_1,13790,HYYDSTIEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13791 68.879 412.0 232200.0 25 0 7720.2 -1 0 116 917.428082822208 1832.841612711216 2 917.4268676638604 MULTI CID FTMS 0 0 0 13778 142250.6875 0.5114019502160696 -1 0.055633544921875 13 3 [MN]PN{I|L}NEAQ 9 -1 66.344 0.0 0.0 3.6198 0.0 0.0 0.0 818.3816612748908 818.3816612748908 39.3316092021137 0.0 0.0 0.0 0 0.5774509799928715 1.5228787452803376 0.0 0.6747425010840047 [MN]PN{I|L}NEAQ 3.6198 - 2195 + 1 1.033 66295.0 1.0 8277 5512 13778 HBL1_DMSO_200M_050219_1,13791 HBL1_DMSO_200M_050219_1,13791, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13793 68.883 16.0 4160900.0 25 0 483860.0 42409 VTEEIPSCQ 9 72 503.2318295443582 1004.4491061555163 2 503.2318908572197 MULTI CID FTMS 0 0 0 13792 3593101.25 0.1396228141368448 -2 0.1446914672851562 1 Unmodified _VTEEIPSCQ_ ENSG00000082269|ENST00000418814|FAM135A;ENST00000393299.6_1_6:71138108-71233862:+|nuORF;nc|ENSG00000082269|Q9P2D6-2|FAM135A;nc|ENSG00000082269|Q9P2D6-3|FAM135A;nc|ENSG00000082269|Q9P2D6-4|FAM135A 6.2057823575117 0.6980434486082533 3 VT 2 7 21.454 0.0 0.0 2.1359 0.0 0.0 0.0 801.3121022099662 801.3121022099662 9.12398358810865 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + VT 2.1359 + + 33 + 1 1.033 56695.2 1.0 8278 5513 13792 HBL1_DMSO_200M_050219_1,13793 HBL1_DMSO_200M_050219_1,13793,VTEEIPSCQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13794 68.884 26.0 917850.0 25 0 97128.0 -1 0 41 653.3283259436264 1956.963148431079 3 653.3286620974541 MULTI CID FTMS 0 0 0 13792 748109.0625 0.138930344482168 6 -0.1982879638671875 2 3 {M(Oxidation (M))|F}C{[TV]|[{I|L}S]} 4 -1 10.974 0.0 0.0 0.56078 0.0 0.0 1488.7683985304914 0.0 1488.7683985304914 0.0 3.984484532805155 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}C{[TV]|[{I|L}S]} 0.56078 - 33 + 1 1.033 28810.3 1.0 8279 5513 13792 HBL1_DMSO_200M_050219_1,13794 HBL1_DMSO_200M_050219_1,13794, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13795 68.885 5.2 7447000.0 25 0 547720.0 + 41411 VPLDKQITI 9 77 513.8132827839034 1025.6120126346068 2 513.8135253787041 MULTI CID FTMS 0 0 0 13792 10383765.0 0.6943425913326243 -8 0.282012939453125 3 Unmodified _VPLDKQITI_ ENSG00000163938|ENST00000418458|GNL3;nc|ENSG00000163938|Q9BVP2-2|GNL3 43.77239144664712 0.0547478964384323 3 [VP]EKQ{I|L}V[{I|L}T] 9 3 + 60.34 0.0 0.0 5.8833 5.8833 84.029 0.0 0.0 0.0 11.237125054200234 4.137342758552691 4.137342758552691 6.020599913279625 0 0.9247425010840048 2.0 0.0 0.0 [VP]EKQ{I|L}V[{I|L}T];[VP]EKQV{I|L}[{I|L}T];[VP]EK[AG]{I|L}V[{I|L}T];[{I|L}P]DKQ{I|L}V[{I|L}T];[VP]EK[AG]V{I|L}[{I|L}T];[{I|L}P]DKQV{I|L}[{I|L}T];[{I|L}P]DK[AG]{I|L}V[{I|L}T];[{I|L}P]DK[AG]V{I|L}[{I|L}T];[VP]EV[KQ]{I|L}[{I|L}T];[{I|L}P]DV[KQ]{I|L}[{I|L}T] 5.8833;5.2963;4.9855;4.7877;4.3985;4.2006;3.8898;3.3028;3.08;1.9844 -;-;-;-;-;-;-;-;-;- 300 1 1.033 35553.5 1.0 8280 5513 13792 HBL1_DMSO_200M_050219_1,13795 HBL1_DMSO_200M_050219_1,13795,VPLDKQITI True True VPLDKQITI 68.885438 513.813525378704 868110976.0 13792.0 ENSG00000163938|ENST00000418458|GNL3;;nc|ENSG00000163938|Q9BVP2-2|GNL3 6.199427127838135 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13796 68.887 9.2 6552200.0 25 0 799340.0 + 21942 LPPLHLLR 8 62 320.21154587615865 957.612808228676 3 320.2113525271416 MULTI CID FTMS 0 0 0 13792 5326600.0 0.2933974394565521 39 -2.7330474853515625 4 Unmodified _LPPLHLLR_ REV__ENST00000295522.3_1_3:190039874-190040219:-|nuORF 29.081581746732265 0.4323690340403521 3 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 -1 + 70.68 0.0 0.0 7.3809 7.3809 84.795 0.0 0.0 0.0 59.71130963036558 8.737125054200234 8.737125054200234 3.0102999566398125 0 0.2302046884880938 1.6989700043360187 0.0 0.3252574989159953 {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 7.3809;7.0665;6.7522;4.4233 -;+;-;- + 81 + 1 1.033 54547.4 1.0 8281 5513 13792 HBL1_DMSO_200M_050219_1,13796 HBL1_DMSO_200M_050219_1,13796,LPPLHLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13797 68.888 11.0 3289300.0 25 0 626290.0 -1 SVVLVPFGCM 10 47 562.775056806722 1123.535560680244 2 562.7756225466728 MULTI CID FTMS 0 0 0 13792 5153704.0 0.5971288663968503 -3 0.16326904296875 5 Carbamidomethyl (C),Oxidation (M) _SVVLVPFGC(Carbamidomethyl (C))M(Oxidation (M))_ ENST00000593682.1_1_19:12690915-12691281:-|nuORF 15.847184025352805 0.5816416552707754 3 [VS]VD{I|L}T 6 -1 56.911 0.0 0.0 5.0654 0.0 0.0 0.0 506.18711267642817 506.18711267642817 52.93182501400722 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 [VS]VD{I|L}T 5.0654 - 27 + 1 1.033 31750.1 1.0 8282 5513 13792 HBL1_DMSO_200M_050219_1,13797 HBL1_DMSO_200M_050219_1,13797,SVVLVPFGCM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13798 68.889 23.0 2552900.0 25 0 252150.0 + 21546 LPIVTPALR 9 74 490.31826747417495 978.62198201515 2 490.3181945681572 MULTI CID FTMS 0 0 0 13792 2718532.75 0.3673202979548539 6 -0.1982879638671875 6 Unmodified _LPIVTPALR_ ENSG00000182481|ENST00000330459|KPNA2 32.78568957990786 0.1150597335874693 3 {I|L}P{I|L}VT 5 4 69.706 0.0 0.0 7.1229 0.0 0.0 0.0 452.2639981863387 452.2639981863387 48.32432436185812 0.0 0.0 0.0 0 1.174742501084005 2.0 0.0 0.0 + {I|L}P{I|L}VT 7.1229 + + 59 + 1 1.033 51393.1 1.0 8283 5513 13792 HBL1_DMSO_200M_050219_1,13798 HBL1_DMSO_200M_050219_1,13798,LPIVTPALR True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13799 68.89 22.0 1817000.0 25 0 226200.0 + 17859 KQLEEAIQL 9 71 536.305645550056 1070.596738166912 2 536.3058349490166 MULTI CID FTMS 0 0 0 13792 2716175.5 0.7814458590612768 -3 0.16326904296875 7 Unmodified _KQLEEAIQL_ ENSG00000119397|ENST00000373855|CNTRL;ENST00000373851.6_1_9:123874787-123912836:+|nuORF;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 32.78568957990786 0.1150597335874693 3 [AG]{I|L}KEEA{I|L}[Q{I|L}] 10 3 + 60.896 0.0 0.0 5.688 5.688 87.583 0.0 0.0 0.0 9.719712763997563 7.269987279362624 7.269987279362624 9.719712763997563 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.4247425010840047 [AG]{I|L}KEEA{I|L}[Q{I|L}];[Q{I|L}]KEEA{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}[KQ]EA{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}{[CP]|[EA]}[KG]A{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}{[CP]|[EA]}[KQ]{I|L}[Q{I|L}] 5.688;4.7801;3.0287;2.4498;1.8397 -;-;-;-;- 107 1 1.033 33773.9 1.0 8284 5513 13792 HBL1_DMSO_200M_050219_1,13799 HBL1_DMSO_200M_050219_1,13799,KQLEEAIQL True True KQLEEAIQL 68.890152 536.305834949017 123608976.0 13792.0 ENST00000373851.6_1_9:123874787-123912836:+|nuORF;;nc|ENSG00000119397|Q7Z7A1-5|CNTRL;;ENSG00000119397|ENST00000373855|CNTRL 5.000187079111735 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13800 68.891 21.0 2161200.0 25 0 179700.0 21804 LPNHVIYLY 9 65 566.3115234879363 1130.6084940426724 2 566.3114501833916 MULTI CID FTMS 0 0 0 13792 2707881.75 0.6416279651117329 -3 0.16326904296875 8 Unmodified _LPNHVIYLY_ ENSG00000126010|ENST00000380289|GRPR 23.1484247019978 0.2366544122328345 3 {I|L}PN 3 6 40.974 0.0 0.0 3.6241 0.0 0.0 0.0 803.4090059869749 803.4090059869749 14.727342925659102 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}PN 3.6241 + + 58 + 1 1.033 37316.0 1.0 8285 5513 13792 HBL1_DMSO_200M_050219_1,13800 HBL1_DMSO_200M_050219_1,13800,LPNHVIYLY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13801 68.893 59.0 3642800.0 25 0 439280.0 -1 0 100 979.4864728335726 1956.9583927339447 2 979.4863159060478 MULTI CID FTMS 0 0 0 13792 2093842.125 0.4982667327264919 -1 0.0890579223632812 9 3 {[QS]|[NT]}V{I|L}CTVTD 9 -1 38.788 0.0 0.0 1.982 0.0 0.0 0.0 1007.4976897474388 1007.4976897474388 9.141522612910371 0.0 0.0 0.0 0 0.0 0.0 1.896591250700361 0.6747425010840047 {[QS]|[NT]}V{I|L}CTVTD 1.982 - 4776 1 1.033 143540.5 1.0 8286 5513 13792 HBL1_DMSO_200M_050219_1,13801 HBL1_DMSO_200M_050219_1,13801, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13802 68.894 28.0 1458800.0 25 0 203090.0 + 28358 PSEPCFRGV 9 82 331.160789756768 990.460539870504 3 331.1604492068291 MULTI CID FTMS 0 0 0 13792 1978082.5 0.2688904666400778 18 -1.1174468994140625 10 Unmodified _PSEPCFRGV_ REV__nc|ENSG00000272398|P25063-2|CD24 4.75600775471527 0.7486543447549536 3 V 1 -1 12.764 0.0 0.0 1.2887 0.0 0.0 873.380757316108 0.0 873.380757316108 0.0 4.603597376478311 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2887 + + 66 + 1 1.033 37195.9 1.0 8287 5513 13792 HBL1_DMSO_200M_050219_1,13802 HBL1_DMSO_200M_050219_1,13802,PSEPCFRGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13803 68.895 18.0 1640000.0 25 0 162830.0 43623 YAKNNIPII 9 62 523.3039931374598 1044.5934333417194 2 523.3036376833916 MULTI CID FTMS 0 0 0 13792 1804847.0 0.5696738632622638 -8 0.282012939453125 11 Unmodified _YAKNNIPII_ ENSG00000134910|ENST00000392708|STT3A;ENST00000526726.1_1_11:125479363-125482632:+|nuORF;ENST00000531001.1_1_11:125478078-125479612:+|nuORF;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;nc|ENSG00000134910|P46977-2|STT3A 5.230669730166228 0.7320841359114558 3 {I|L} 1 8 12.218 0.0 0.0 1.1697 0.0 0.0 913.4981249694524 0.0 913.4981249694524 0.0 2.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1697 + + 11 + 1 1.033 27459.7 1.0 8288 5513 13792 HBL1_DMSO_200M_050219_1,13803 HBL1_DMSO_200M_050219_1,13803,YAKNNIPII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13804 68.896 44.0 682620.0 25 0 54697.0 4059 DALWPPPDRV 10 65 583.3047655689543 1164.5949782047085 2 583.3048583865166 MULTI CID FTMS 0 0 0 13792 1536023.5 0.3497586850003296 19 -1.1729812622070312 12 Unmodified _DALWPPPDRV_ ENSG00000111196|ENST00000320756|MAGOHB;ENSG00000162385|ENST00000371470|MAGOH;ENST00000462941.1_1_1:53699171-53704129:-|nuORF;ENST00000537852.5_1_12:10762420-10766167:-|nuORF 10.073929032068715 0.6785112666868882 3 V 1 9 13.099 0.0 0.0 1.1248 0.0 0.0 1047.5154169027537 0.0 1047.5154169027537 0.0 1.2628749457997657 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1248 + + 14 + 1 1.033 31127.1 1.0 8289 5513 13792 HBL1_DMSO_200M_050219_1,13804 HBL1_DMSO_200M_050219_1,13804,DALWPPPDRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13805 68.898 22.0 1110900.0 25 0 76891.0 + 34907 SQIENTPIL 9 66 507.7772529110997 0 507.7773620486259 PEAK CID FTMS 0 0 0 13792 1489312.125 0.997375072556554 -3 0.16326904296875 13 Unmodified _SQIENTPIL_ ENSG00000136381|ENST00000258886|IREB2;nc|ENSG00000136381|P48200-2|IREB2 13.90604991867851 0.2674652324371145 3 T 1 8 6.9897 0.0 0.0 0.68963 0.0 0.0 571.8683963477869 337.6006258600219 909.4690222078088 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + T 0.68963 + + 8 + 1 1.033 27477.6 1.0 8290 5513 13792 HBL1_DMSO_200M_050219_1,13805 HBL1_DMSO_200M_050219_1,13805,SQIENTPIL False True SQIENTPIL 68.897607 507.777362048626 25487798.0 13792.0 ENSG00000136381|ENST00000258886|IREB2;;nc|ENSG00000136381|P48200-2|IREB2 1.8709675669670105 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13806 68.899 49.0 679100.0 25 0 70411.0 + 25040 MPTLPPPSV 9 79 469.7543088661768 937.4940647991536 2 469.7545349001884 MULTI CID FTMS 0 0 0 13792 1437362.875 0.8004285555278589 4 -0.1290817260742187 14 Unmodified _MPTLPPPSV_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 39.957323273325 0.0756908302845263 3 [DV][{I|L}A]P 5 7 34.366 0.0 0.0 3.6657 0.0 0.0 0.0 439.2015287486256 439.2015287486256 19.67294031092848 0.0 0.0 0.0 0 1.0 2.0 0.805462187404089 0.0 [DV][{I|L}A]P 3.6657 - 134 1 1.033 28073.1 1.0 8291 5513 13792 HBL1_DMSO_200M_050219_1,13806 HBL1_DMSO_200M_050219_1,13806,MPTLPPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13807 68.901 82.0 4845100.0 25 0 575780.0 8068 ENWEVEVT 8 111 335.82371844756244 1004.4493259428872 3 335.8235351443291 MULTI CID FTMS 0 0 0 13792 1225915.625 0.3492573923520187 -2 0.1446914672851562 15 Unmodified _ENWEVEVT_ ENSG00000074695|ENST00000251047|LMAN1;ENST00000587561.1_1_18:57020403-57026476:-|nuORF 18.1463463914782 0.6428359029697936 3 TG 2 8 36.075 0.0 0.0 3.5915 0.0 0.0 0.0 843.3588468469143 843.3588468469143 6.064673634038925 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 TG 3.5915 - 614 + 1 1.033 314875.0 1.0 8292 5513 13792 HBL1_DMSO_200M_050219_1,13807 HBL1_DMSO_200M_050219_1,13807,ENWEVEVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13808 68.902 34.0 2597600.0 25 0 503910.0 + 6278 DVANKIGII 9 108 471.78519209111215 941.5558312490244 2 471.7854492068291 MULTI CID FTMS 0 0 0 13792 1144924.0 0.1381085555847539 -8 0.282012939453125 16 Unmodified _DVANKIGII_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 34.40172386719151 0.1061884637610825 3 [DV]AN 4 5 46.242 0.0 0.0 4.9113 0.0 0.0 0.0 539.3553560846311 539.3553560846311 -1.954321750294668 0.0 -1.954321750294668 0.0 0 0.7742275032520141 2.0 0.0 0.3807196863200844 + [DV]AN 4.9113 + + 955 + 1 1.033 73128.2 1.0 8293 5513 13792 HBL1_DMSO_200M_050219_1,13808 HBL1_DMSO_200M_050219_1,13808,DVANKIGII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13809 68.906 200.0 1102600.0 25 0 95969.0 + 26324 NSALVLKV 8 159 422.26837326786944 842.5221936025389 2 422.2683288455009 MULTI CID FTMS 0 0 0 13792 1021713.4375 0.8127724896398625 6 -0.1982879638671875 17 Unmodified _NSALVLKV_ ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF 53.832793166522166 0.1212192986213991 3 [NS]A{I|L}V{I|L}KV 8 0 + 62.853 0.0 0.0 7.4601 7.4601 86.276 0.0 0.0 0.0 20.0 3.802112417116064 3.802112417116064 3.802112417116064 0 1.316901560044258 1.3010299956639813 0.0 0.2059771852360797 + + [NS]A{I|L}V{I|L}KV;[NS]A{I|L}V{I|L}VK 7.4601;7.0089 +;- + 208 + 1 1.033 171212.3 1.0 8294 5513 13792 HBL1_DMSO_200M_050219_1,13809 HBL1_DMSO_200M_050219_1,13809,NSALVLKV True True NSALVLKV 68.905738 422.268328845501 20730140.0 13792.0 ENSG00000139687|ENST00000267163|RB1;;ENST00000525036.1_1_13:48877982-48934322:+|nuORF 4.637846310933431 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13810 68.91 203.0 519810.0 25 0 47099.0 + 35936 SVPESPEFVRV 11 73 623.3275420605378 1244.6405311878757 2 623.3287841677666 MULTI CID FTMS 0 0 0 13792 872121.0 0.2217353929828959 -8 0.282012939453125 18 Unmodified _SVPESPEFVRV_ ENSG00000084090|ENST00000337288|STARD7 46.0223103267499 0.1396584557920269 3 [VS]PESPE{M(Oxidation (M))|F}VRV 11 0 + 83.669 0.0 0.0 6.7224 6.7224 93.536 0.0 0.0 0.0 53.735583038944455 6.920179638817004 6.920179638817004 27.81289824597817 0 0.6989700043360187 2.0 1.2302046884880935 0.0 + + [VS]PESPE{M(Oxidation (M))|F}VRV;WPE[{I|L}P]C{M(Oxidation (M))|F}VRV;WPE[{I|L}P][WY]RV;{[CT]|[{M(Oxidation (M))|F}G]}[HA][{I|L}P]C{M(Oxidation (M))|F}VRV 6.7224;4.4878;3.0816;1.1908 +;-;-;- + 104 + 1 1.033 80444.0 1.0 8295 5513 13792 HBL1_DMSO_200M_050219_1,13810 HBL1_DMSO_200M_050219_1,13810,SVPESPEFVRV False True SVPESPEFVRV 68.909623 623.328784167767 127838640.0 13792.0 ENSG00000084090|ENST00000337288|STARD7 8.142216364542643 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13811 68.911 69.0 980090.0 25 0 138850.0 + 38930 TVLSNLISC 9 86 475.2530741705133 0 475.2536498904228 PEAK CID FTMS 0 0 0 13792 788652.8125 0.4173914306190439 18 -1.1174468994140625 19 Unmodified _TVLSNLISC_ REV__ENST00000415776.1_1_Y:19868883-19869072:-|nuORF 52.268347100219714 0.0254642048063414 3 {I|L}NTVE 5 -1 38.761 0.0 0.0 4.0866 0.0 0.0 321.13040263614545 68.05146967105702 389.18187230720247 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 1.0044321917401078 0.4247425010840047 {I|L}NTVE 4.0866 - 233 + 1 1.033 58218.8 1.0 8296 5513 13792 HBL1_DMSO_200M_050219_1,13811 HBL1_DMSO_200M_050219_1,13811,TVLSNLISC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13812 68.915 213.0 707890.0 25 0 69145.0 + -1 ELIESRCSSV 10 116 590.2898727825948 1178.5651926319897 2 590.2896606326103 MULTI CID FTMS 0 0 0 13792 748776.0 0.2008340054948153 6 -0.1982879638671875 20 Carbamidomethyl (C) _ELIESRC(Carbamidomethyl (C))SSV_ REV__ENST00000472564.1_1_13:113976150-113976327:+|nuORF 13.042465956692816 0.6287021003332052 3 [Y{I|L}]TGY{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}GV 10 -1 + 24.127 0.0 0.0 2.0472 2.0472 65.899 0.0 0.0 0.0 2.4477272448304888 5.039237471316298 2.4477272448304888 0.2680249241196719 0 0.0 0.0 0.3807196863200844 0.0 [Y{I|L}]TGY{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}GV;[Y{I|L}]TGY{I|L}{M(Oxidation (M))|F}CTV;[Y{I|L}]TGY{I|L}{M(Oxidation (M))|F}CS{I|L};{[SA]|[TG]}Y{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GV[Y{I|L}];[Y{I|L}]TT[Y{M(Oxidation (M))|F}]{I|L}CGV;[Y{I|L}]TGY{I|L}G{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V;[Y{I|L}][{M(Oxidation (M))|F}V][YT]A{M(Oxidation (M))|F}GV;[Y{I|L}][{M(Oxidation (M))|F}V][YT]ACTV;GGY{I|L}{[YC]|[HE]}EV[Y{I|L}];[YN]{I|L}{[YC]|[HE]}EV[Y{I|L}] 2.0472;2.0244;1.6196;0.94118;0.91023;0.7788;0.75285;0.73011;0.70997;0.62775 -;-;-;-;-;-;-;-;-;- 2036 + 1 1.033 116305.8 1.0 8297 5513 13792 HBL1_DMSO_200M_050219_1,13812 HBL1_DMSO_200M_050219_1,13812,ELIESRCSSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13814 68.919 8.7 1623100.0 25 0 196520.0 + 15586 IPYPLSENNQV 11 44 637.3245343686755 1272.6345158041509 2 637.3249389529228 MULTI CID FTMS 0 0 0 13813 3778377.0 0.3130255423405164 12 -0.6061859130859375 1 Unmodified _IPYPLSENNQV_ ENSG00000104549|ENST00000265896|SQLE 18.1463463914782 0.6576820063886638 3 [{I|L}P]YP{I|L}{[ES]|[DT]|[{I|L}C]}N 8 3 28.594 0.0 0.0 2.2468 0.0 0.0 0.0 356.1574939885123 356.1574939885123 26.11941264025134 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 + [{I|L}P]YP{I|L}{[ES]|[DT]|[{I|L}C]}N 2.2468 + + 30 1 1.033 18106.9 1.0 8298 5514 13813 HBL1_DMSO_200M_050219_1,13814 HBL1_DMSO_200M_050219_1,13814,IPYPLSENNQV False True IPYPLSENNQV 68.919342 637.324938952923 693205520.0 13813.0 ENSG00000104549|ENST00000265896|SQLE 6.564771334330241 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13815 68.921 8.2 5200400.0 25 0 898030.0 37153 TIADLSYQDV 10 61 375.5192865794357 1123.536030338507 3 375.5193969607353 MULTI CID FTMS 0 0 0 13813 3980126.5 0.704968033461183 -2 0.1253204345703125 2 Unmodified _TIADLSYQDV_ ENSG00000101353|ENST00000343811|MROH8;nc|ENSG00000101353|Q9H579-2|MROH8;nc|ENSG00000101353|Q9H579|MROH8 16.149105407346934 0.5765757077271437 3 {[RE]|[WV]}D{I|L}T{I|L} 6 8 40.406 0.0 0.0 3.5963 0.0 0.0 0.0 393.1025484674438 393.1025484674438 31.453650195120844 0.0 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 {[RE]|[WV]}D{I|L}T{I|L} 3.5963 - 42 + 1 1.033 44874.0 1.0 8299 5514 13813 HBL1_DMSO_200M_050219_1,13815 HBL1_DMSO_200M_050219_1,13815,TIADLSYQDV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13816 68.922 5.2 7077900.0 25 0 1329500.0 + 40741 VLIILSNG 8 66 414.76211459499535 827.5096762567907 2 414.7619811892509 MULTI CID FTMS 0 0 0 13813 4050963.5 0.3331621177688941 -2 0.1253204345703125 3 Unmodified _VLIILSNG_ REV__ENSG00000166363|ENST00000299454|OR10A5 0.6014990680409731 0.820681427635312 3 V 1 -1 11.109 0.0 0.0 1.3425 0.0 0.0 710.4302904309103 0.0 710.4302904309103 0.0 8.010299956639813 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3425 + + 4 + 1 1.033 38294.1 1.0 8300 5514 13813 HBL1_DMSO_200M_050219_1,13816 HBL1_DMSO_200M_050219_1,13816,VLIILSNG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13817 68.924 97.0 1450100.0 25 0 93354.0 -1 0 82 986.4825645992212 1970.9505762652425 2 986.9842407107352 MULTI CID FTMS 0 0 0 13813 3027387.5 0.5703610543188534 3 -0.0928192138671875 4 3 {[QS]|[NT]}{I|L}[YG]TVT 8 -1 42.223 0.0 0.0 2.1423 0.0 0.0 0.0 1118.5051008436449 1118.5051008436449 18.2460611760194 0.0 0.0 0.0 0 0.0 0.0 2.149649864804614 1.1307196863200843 {[QS]|[NT]}{I|L}[YG]TVT 2.1423 - 961 1 1.033 95147.7 1.0 8301 5514 13813 HBL1_DMSO_200M_050219_1,13817 HBL1_DMSO_200M_050219_1,13817, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13818 68.925 6.0 4406700.0 25 0 374060.0 + -1 GHLCGSSCSL 10 63 510.7148672810575 1019.415181628915 2 511.2170593142509 MULTI CID FTMS 0 0 0 13813 3001453.0 0.3289672742856234 5 -0.1620254516601562 5 Carbamidomethyl (C) _GHLC(Carbamidomethyl (C))GSSCSL_ REV__ENST00000586717.5_2_17:73906707-73906803:-|nuORF 6.2057823575117 0.6979311171683138 3 CTV 3 -1 14.663 0.0 0.0 1.4383 0.0 0.0 698.2821382712963 0.0 698.2821382712963 0.0 0.990410138293038 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 CTV 1.4383 - 21 + 1 1.033 28958.1 1.0 8302 5514 13813 HBL1_DMSO_200M_050219_1,13818 HBL1_DMSO_200M_050219_1,13818,GHLCGSSCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13819 68.926 12.0 2465000.0 25 0 162180.0 37066 TGGVTAFHYL 10 73 533.2720326860506 1064.529512438901 2 533.2719604372978 MULTI CID FTMS 0 0 0 13813 2224474.75 0.0598687719218543 -12 0.3541488647460937 6 Unmodified _TGGVTAFHYL_ ENST00000376566.8_1_X:48755271-48755857:+|nuORF;ENST00000472742.5_1_X:48755271-48760011:+|nuORF 14.838274106304384 0.5985701837916485 3 {[QS]|[NT]}VT 4 7 26.669 0.0 0.0 2.5052 0.0 0.0 0.0 646.2992932829042 646.2992932829042 1.963950151760656 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.174742501084005 0.0 {[QS]|[NT]}VT 2.5052 - 63 1 1.033 29828.7 1.0 8303 5514 13813 HBL1_DMSO_200M_050219_1,13819 HBL1_DMSO_200M_050219_1,13819,TGGVTAFHYL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13820 68.927 18.0 3147900.0 25 0 437760.0 + 25245 MVPEDVPRL 9 79 528.2793390778404 1054.5441252224807 2 528.2819702029228 MULTI CID FTMS 0 0 0 13813 938628.75 0.3833995255239211 -12 0.3541488647460937 7 Unmodified _MVPEDVPRL_ ENSG00000272333|ENST00000420124|KMT2B 29.081581746732265 0.1611639662936252 3 {[ET]|[MV]}PEDV[RP]{I|L} 9 0 + 34.587 0.0 0.0 3.2798 3.2798 82.415 0.0 0.0 0.0 9.181212380090225 6.17091242345041 6.17091242345041 20.9960752895141 0 0.0 0.0 0.0 0.3494850021680094 + + {[ET]|[MV]}PEDV[RP]{I|L};[EP][RK][NS]{I|L}[DP];[TP]RR[NS]{I|L}[DP];[WP][C(Carbamidomethyl (C))Q]V[RP]{I|L};[TP]RR[WQ][DP] 3.2798;1.2888;1.0784;0.88745;0.7496 +;-;-;-;- + 69 + 1 1.033 50045.1 1.0 8304 5514 13813 HBL1_DMSO_200M_050219_1,13820 HBL1_DMSO_200M_050219_1,13820,MVPEDVPRL False True MVPEDVPRL 68.92739 528.281970202923 121791360.0 13813.0 ENSG00000272333|ENST00000420124|KMT2B 6.961934884389241 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13821 68.929 19.0 1541700.0 25 0 111010.0 + 21912 LPPHIIRL 8 67 479.8137764865654 957.6130000399309 2 479.8141967654228 MULTI CID FTMS 0 0 0 13813 725705.0 0.2966760512595614 -7 0.2890853881835937 8 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 24.020572477871973 0.5389365498350341 3 {I|L}PPH{I|L}[R{I|L}]{I|L} 8 0 + 59.373 0.0 0.0 6.2001 6.2001 92.725 0.0 0.0 0.0 47.38351285388511 0.1772876696043113 0.1772876696043113 59.373212897245295 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPH{I|L}[R{I|L}]{I|L} 6.2001 + + 31 + 1 1.033 29539.2 1.0 8305 5514 13813 HBL1_DMSO_200M_050219_1,13821 HBL1_DMSO_200M_050219_1,13821,LPPHIIRL False True LPPHIIRL 68.928569 479.814196765423 308312312.0 13813.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 3.723490715026856 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13822 68.93 54.0 1031500.0 25 0 214290.0 27937 PLTRQISV 8 63 457.2772077596935 912.539862586187 2 457.2770568728447 MULTI CID FTMS 0 0 0 13813 636811.5625 0.4777959380204579 -2 0.1253204345703125 9 Unmodified _PLTRQISV_ ENSG00000141098|ENST00000268797|GFOD2;nc|ENSG00000141098|Q3B7J2-3|GFOD2 16.942295170755138 0.6606234159769251 3 SV 2 6 23.698 0.0 0.0 2.5969 0.0 0.0 708.4282730859902 0.0 708.4282730859902 0.0 12.01544993495972 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 + SV 2.5969 + + 27 + 1 1.033 53249.2 1.0 8306 5514 13813 HBL1_DMSO_200M_050219_1,13822 HBL1_DMSO_200M_050219_1,13822,PLTRQISV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13823 68.935 257.0 793790.0 25 0 69494.0 + 4381 DAVKILKL 8 162 450.2995652608613 898.5845775885225 2 450.2996093630791 MULTI CID FTMS 0 0 0 13813 523505.6875 0.3580314349552517 -7 0.2890853881835937 10 Unmodified _DAVKILKL_ ENSG00000107290|ENST00000224140|SETX;ENST00000477049.1_1_9:135139628-135141576:-|nuORF;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX 60.07390631473393 0.1152413078224327 3 DAVK{I|L}{I|L}K{I|L} 8 0 + 82.108 0.0 0.0 9.1375 9.1375 91.833 0.0 0.0 0.0 21.299374434705136 6.628723063164927 6.628723063164927 6.628723063164927 0 2.0669015600442577 1.6989700043360187 0.0 0.2614393726401688 + + DAVK{I|L}{I|L}K{I|L};DAVK{I|L}{I|L}{I|L}K;{I|L}GDK{I|L}{I|L}K{I|L};{I|L}GDK{I|L}{I|L}{I|L}K 9.1375;8.3998;6.7672;6.0295 +;-;-;- + 1069 + 1 1.033 157732.6 1.0 8307 5514 13813 HBL1_DMSO_200M_050219_1,13823 HBL1_DMSO_200M_050219_1,13823,DAVKILKL True True DAVKILKL 68.934713 450.299609363079 25414074.0 13813.0 ENSG00000107290|ENST00000224140|SETX;;ENST00000477049.1_1_9:135139628-135141576:-|nuORF;;nc|ENSG00000107290|Q7Z333-4|SETX;;nc|ENSG00000107290|Q7Z333-3|SETX 4.1322323481241865 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13824 68.936 18.0 747910.0 25 0 81690.0 + 10815 FYWKVLSY 8 38 553.2872852090301 1104.56001748486 2 553.7904540896416 MULTI CID FTMS 0 0 0 13813 514229.5625 0.0392267392973111 -9 0.3182754516601562 11 Unmodified _FYWKVLSY_ REV__ENSG00000172954|ENST00000379509|LCLAT1;REV__nc|ENSG00000172954|Q6UWP7|LCLAT1 2.302733041254933 0.8103549651115762 3 {[QS]|[NT]}{I|L} 3 -1 8.9524 0.0 0.0 0.8105 0.0 0.0 0.0 773.3628183483944 773.3628183483944 3.4678748622465623 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QS]|[NT]}{I|L} 0.8105 - 10 1 1.033 16223.8 1.0 8308 5514 13813 HBL1_DMSO_200M_050219_1,13824 HBL1_DMSO_200M_050219_1,13824,FYWKVLSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13826 68.94 0.31 101910000.0 25 0 13128000.0 + 37120 TGYLNTVTV 9 58 484.25839615362605 966.502239374052 2 484.2586852908134 MULTI CID FTMS 0 0 0 13825 88360048.0 0.2087844738989493 20 -1.4612350463867188 1 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 18.1463463914782 0.3454829746528889 3 CTV 3 7 30.234 0.0 0.0 3.1282 0.0 0.0 645.3684025594022 0.0 645.3684025594022 0.0 20.012936175259345 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 CTV 3.1282 - 49 + 1 1.033 28722.6 1.0 8309 5515 13825 HBL1_DMSO_200M_050219_1,13826 HBL1_DMSO_200M_050219_1,13826,TGYLNTVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13827 68.941 3.9 7643700.0 25 0 1573400.0 42127 VRRLPGGG 8 53 406.24857980309577 810.4826066729916 2 406.2484619021416 MULTI CID FTMS 0 0 0 13825 7033924.5 0.4476167303289617 -1 0.0205917358398437 2 Unmodified _VRRLPGGG_ ENST00000497505.5_1_2:203879615-203880929:+|nuORF 0.0 0.8243325171867699 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.033 30677.0 1.0 8310 5515 13825 HBL1_DMSO_200M_050219_1,13827 HBL1_DMSO_200M_050219_1,13827,VRRLPGGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13828 68.942 3.1 8380800.0 25 0 921900.0 21620 LPLAAALAF 9 56 443.7734510303929 885.5323491275858 2 443.7735168337822 MULTI CID FTMS 0 0 0 13825 7043888.0 0.4121537435143558 -1 0.0205917358398437 3 Unmodified _LPLAAALAF_ ENSG00000262655|ENST00000576479|SPON1 14.581692164780916 0.4419739649577144 3 {I|L}P 2 7 44.464 0.0 0.0 5.0212 0.0 0.0 0.0 672.3728121393186 672.3728121393186 29.85985638199878 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}P 5.0212 + + 26 + 1 1.033 26429.1 1.0 8311 5515 13825 HBL1_DMSO_200M_050219_1,13828 HBL1_DMSO_200M_050219_1,13828,LPLAAALAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13829 68.943 32.0 1316200.0 25 0 73692.0 + 37987 TNLEPLEYE 9 84 554.2616257128416 1106.508698492483 2 554.2628051638603 MULTI CID FTMS 0 0 0 13825 432010.09375 0.0112045215659177 30 -2.250068664550781 4 Unmodified _TNLEPLEYE_ REV__ENSG00000164975|ENST00000380821|SNAPC3 9.38312468134398 0.5871240394367778 3 {[QS]|[NT]}{I|L} 3 -1 12.898 0.0 0.0 1.1657 0.0 0.0 0.0 775.310187100158 775.310187100158 1.929314980031701 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.2396518287104437 {[QS]|[NT]}{I|L} 1.1657 + + 65 1 1.033 35763.6 1.0 8312 5515 13825 HBL1_DMSO_200M_050219_1,13829 HBL1_DMSO_200M_050219_1,13829,TNLEPLEYE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13830 68.947 202.0 314570.0 25 0 18483.0 28883 QALYPVQQTI 10 102 580.8196542236984 1159.6247555141967 2 580.8209106326103 MULTI CID FTMS 0 0 0 13825 347673.59375 0.4977139850876671 2 -0.0722274780273437 5 Unmodified _QALYPVQQTI_ ENSG00000146414|ENST00000275233|SHPRH;ENST00000433355.6_1_6:146231577-146267398:-|nuORF;ENST00000519632.5_1_6:146239221-146248402:-|nuORF;ENST00000523276.1_1_6:146240471-146248402:-|nuORF;nc|ENSG00000146414|Q149N8-4|SHPRH 43.77239144664712 0.1177314611616471 3 K{I|L}MC{I|L}[NP]QT 9 8 49.116 0.0 0.0 4.2355 0.0 0.0 0.0 128.07216821842033 128.07216821842033 24.06681865368853 0.0 0.0 0.0 0 1.0 0.0 1.024227503252014 0.0 K{I|L}MC{I|L}[NP]QT 4.2355 - 878 + 1 1.033 51507.3 1.0 8313 5515 13825 HBL1_DMSO_200M_050219_1,13830 HBL1_DMSO_200M_050219_1,13830,QALYPVQQTI True True KLMEEIREL 68.947333 580.82091063261 6425523.5 13825.0 ENSG00000122482|ENST00000337393|ZNF644;;nc|ENSG00000122482|Q9H582-2|ZNF644 2.0759894847869877 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13832 68.951 4.8 8783500.0 25 0 558510.0 -1 VMPRQMGV 8 75 496.2378657400438 990.4611785468876 2 496.2370178103447 MULTI CID FTMS 0 0 0 13831 8384863.0 0.6711353995570034 7 -0.30633544921875 1 Acetyl (Protein N-term),2 Oxidation (M) _(Acetyl (Protein N-term))VM(Oxidation (M))PRQM(Oxidation (M))GV_ ENST00000461208.5_1_3:47545925-47552697:-|nuORF;ENST00000483205.1_1_3:47551669-47552697:-|nuORF 6.354104778181461 0.7857632046190106 3 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}GV 5 -1 20.406 0.0 0.0 2.0603 0.0 0.0 409.1855570642688 0.0 409.1855570642688 0.0 9.832881222565248 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}GV 2.0603 - 525 + 1 1.033 35895.4 1.0 8314 5516 13831 HBL1_DMSO_200M_050219_1,13832 HBL1_DMSO_200M_050219_1,13832,VMPRQMGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13833 68.953 23.0 2069200.0 25 0 96585.0 -1 0 72 873.4185370560829 1744.8225211789656 2 873.9223510622978 MULTI CID FTMS 0 0 0 13831 2419983.5 1.0 0 0.0 2 3 QAENMPP[EP] 9 -1 33.536 0.0 0.0 1.922 0.0 0.0 733.3857289044937 0.0 733.3857289044937 0.0 6.368865538569473 0.0 0.0 0 0.6435078169319297 0.0 0.4247425010840047 0.0 QAENMPP[EP] 1.922 - 158 1 1.033 39236.2 1.0 8315 5516 13831 HBL1_DMSO_200M_050219_1,13833 HBL1_DMSO_200M_050219_1,13833, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13834 68.954 18.0 2084500.0 25 0 266230.0 + 21226 LPDGRTLIV 9 59 492.2987000704332 982.5828472076664 2 492.2976562380791 MULTI CID FTMS 0 0 0 13831 3118336.75 0.2710035957546196 -7 0.2664108276367187 3 Unmodified _LPDGRTLIV_ ENSG00000106829|ENST00000376552|TLE4;ENSG00000140332|ENST00000451782|TLE3;ENST00000462803.5_1_9:82286241-82340056:+|nuORF;ENST00000557815.1_1_15:70346775-70346994:-|nuORF;nc|ENSG00000106829|Q04727-2|TLE4;nc|ENSG00000106829|Q04727-3|TLE4;nc|ENSG00000106829|Q04727-4|TLE4;nc|ENSG00000140332|Q04726-2|TLE3;nc|ENSG00000140332|Q04726-3|TLE3;nc|ENSG00000140332|Q04726-4|TLE3;nc|ENSG00000140332|Q04726-6|TLE3;nc|ENSG00000140332|Q04726-7|TLE3;nc|ENSG00000140332|Q04726|TLE3 20.41453444215458 0.284085796332423 3 {I|L}PD 3 6 33.901 0.0 0.0 3.4502 0.0 0.0 0.0 654.3949125830925 654.3949125830925 16.962724883926654 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + {I|L}PD 3.4502 + + 25 + 1 1.033 34377.6 1.0 8316 5516 13831 HBL1_DMSO_200M_050219_1,13834 HBL1_DMSO_200M_050219_1,13834,LPDGRTLIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13835 68.955 53.0 823580.0 25 0 41103.0 + 15594 IPYPRPIHL 9 83 553.3275358033974 1104.640518673595 2 553.8303100466728 MULTI CID FTMS 0 0 0 13831 1779432.625 0.7487820521991756 -5 0.2129898071289062 4 Unmodified _IPYPRPIHL_ ENSG00000102897|ENST00000567954|LYRM1 21.74664581756881 0.2544899275067181 3 {I|L}PY 3 6 31.682 0.0 0.0 2.8681 0.0 0.0 0.0 728.4187716119749 728.4187716119749 16.890144195051906 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + {I|L}PY 2.8681 + + 119 + 1 1.033 44408.8 1.0 8317 5516 13831 HBL1_DMSO_200M_050219_1,13835 HBL1_DMSO_200M_050219_1,13835,IPYPRPIHL False True IPYPRPIHL 68.955127 553.830310046673 31838174.0 13831.0 ENSG00000102897|ENST00000567954|LYRM1 3.820782343546549 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13836 68.956 52.0 984470.0 25 0 306020.0 17481 KPGARRLL 8 71 455.8009072210231 909.5872615088462 2 455.8011047244072 MULTI CID FTMS 0 0 0 13831 1593833.75 1.0 0 0.0 5 Unmodified _KPGARRLL_ ENST00000436193.5_2_3:15643483-15643624:+|nuORF 0.6903765706972694 0.8201419426409876 3 {I|L} 1 7 9.8329 0.0 0.0 1.081 0.0 0.0 778.4918463250556 0.0 778.4918463250556 0.0 9.832881222565248 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.081 + + 2 + 1 1.033 44812.9 1.0 8318 5516 13831 HBL1_DMSO_200M_050219_1,13836 HBL1_DMSO_200M_050219_1,13836,KPGARRLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13837 68.958 56.0 1098900.0 25 0 76018.0 + 13906 HVVEILVET 9 90 519.79495259044 1037.5753522476798 2 519.7947875857353 MULTI CID FTMS 0 0 0 13831 1030193.9375 0.0722039171661583 37 -2.7559814453125 6 Unmodified _HVVEILVET_ ENSG00000170779|ENST00000336219|CDCA4 57.47134341890925 0.0274820932774257 3 [HV]VE{I|L}{I|L}VET 9 0 + 51.92 0.0 0.0 5.004 5.004 82.779 0.0 0.0 0.0 13.43031495462781 9.889917747712644 9.889917747712644 8.02378753635658 0 0.535666875892183 1.3979400086720375 0.3252574989159953 0.0 + + [HV]VE{I|L}{I|L}VET;[HV]VE{I|L}V{I|L}ET;{NN|[MP]|[D{I|L}]|[EV]}HV{I|L}{I|L}VET;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}HVVET;{NN|[MP]|[D{I|L}]|[EV]}HV{I|L}V{I|L}ET;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[HV]{I|L}VET;[{I|L}V][HD]{I|L}{I|L}VET;[{I|L}V]E{I|L}HVVET;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[HV]V{I|L}ET;[{I|L}V][HD]{I|L}V{I|L}ET 5.004;4.2307;3.7096;3.2257;2.9363;2.6284;2.2759;2.0028;1.855;1.5025 +;-;-;-;-;-;-;-;-;- + 147 1 1.033 53829.7 1.0 8319 5516 13831 HBL1_DMSO_200M_050219_1,13837 HBL1_DMSO_200M_050219_1,13837,HVVEILVET True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13838 68.962 192.0 507580.0 25 0 70064.0 + 39205 TYSEFAREL 9 105 558.2720067651649 0 558.2703124880791 PEAK CID FTMS 0 0 0 13831 621845.375 0.0871406838895456 32 -2.390899658203125 7 Unmodified _TYSEFAREL_ nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1 23.78978130925829 0.1667157386347964 3 SE{M(Oxidation (M))|F}KP 5 6 32.449 0.0 0.0 2.9114 0.0 0.0 264.1094470482256 259.1089266412719 523.2183736894975 0.0 0.0 0.0 0.0 0 0.75 0.0 0.0 0.0 SE{M(Oxidation (M))|F}KP 2.9114 - 154 + 1 1.033 80146.9 1.0 8320 5516 13831 HBL1_DMSO_200M_050219_1,13838 HBL1_DMSO_200M_050219_1,13838,TYSEFAREL False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13839 68.966 238.0 526220.0 25 0 98250.0 43254 WEIHERRMK 9 96 428.8913451861504 0 428.7780334353447 PEAK CID FTMS 0 0 0 13831 119924.34375 0.3009162800315126 2 -0.0827407836914062 8 Unmodified _WEIHERRMK_ ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1 0.8643753074506083 0.3444685223463734 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.033 98179.4 1.0 8321 5516 13831 HBL1_DMSO_200M_050219_1,13839 HBL1_DMSO_200M_050219_1,13839,WEIHERRMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13840 68.97 226.0 131340.0 25 0 14398.0 -1 0 67 1029.9215030124176 2057.828453091636 2 1030.427416980267 MULTI CID FTMS 0 0 0 13831 577891.25 1.0 0 0.0 9 3 [YQ]{I|L}ENY 6 -1 34.966 0.0 0.0 1.6992 0.0 0.0 0.0 1244.4488503907166 1244.4488503907166 16.28144697160131 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 [YQ]{I|L}ENY 1.6992 - 175 1 1.033 30321.2 1.0 8322 5516 13831 HBL1_DMSO_200M_050219_1,13840 HBL1_DMSO_200M_050219_1,13840, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13841 68.972 90.0 921140.0 25 0 221300.0 39528 VAVILKALT 9 91 464.3142578005791 0 464.3142578005791 PEAK CID FTMS 0 0 0 -1 0 10 Unmodified _VAVILKALT_ ENSG00000141556|ENST00000355528|TBCD;ENST00000574801.5_1_17:80822167-80863832:+|nuORF;nc|ENSG00000141556|Q9BTW9-4|TBCD;nc|ENSG00000141556|Q9BTW9-5|TBCD 2.059750862983233 0.3444685223463734 3 W 1 9 5.4846 0.0 0.0 0.59189 0.0 0.0 210.2117776349625 527.2837618463499 737.4955394813123 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.59189 - 10 + 1 1.033 70434.4 1.0 8323 5516 13831 HBL1_DMSO_200M_050219_1,13841 HBL1_DMSO_200M_050219_1,13841,VAVILKALT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13842 68.976 201.0 402990.0 25 0 26272.0 15182 IPDYTSFNTV 10 119 578.7779001794019 1155.5412474256036 2 578.7785522341728 MULTI CID FTMS 0 0 0 13831 553128.375 1.0 0 0.0 11 Unmodified _IPDYTSFNTV_ ENSG00000133216|ENST00000374630|EPHB2;nc|ENSG00000133216|P29323-3|EPHB2;nc|ENSG00000133216|P29323|EPHB2 24.020572477871973 0.4289996903560794 3 [Y{I|L}][YG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}TV 9 5 + 31.377 0.0 0.0 2.7154 2.7154 73.838 0.0 0.0 0.0 0.7032568205141168 12.381062318217104 0.7032568205141168 4.771212547196626 0 0.5 1.5228787452803376 0.4247425010840047 0.0 [Y{I|L}][YG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}TV;[Y{I|L}][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[HM]TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P[YE]{M(Oxidation (M))|F}EV;[Y{I|L}]A[YQ]EAAEV;[{I|L}P]YP[YE]{M(Oxidation (M))|F}EV;[Y{I|L}][{M(Oxidation (M))|F}V][HC]{M(Oxidation (M))|F}EV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EAAM{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[YQ]EAAEV;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[YD]|[{M(Oxidation (M))|F}M]}TV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[RD]M{M(Oxidation (M))|F}TV 2.7154;2.3025;2.0111;1.8302;1.7506;1.7174;1.5552;1.5117;1.495;1.4028 -;-;-;-;-;-;-;-;-;- 598 1 1.033 65334.9 1.0 8324 5516 13831 HBL1_DMSO_200M_050219_1,13842 HBL1_DMSO_200M_050219_1,13842,IPDYTSFNTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13843 68.98 220.0 254990.0 25 0 7621.5 + 28777 PYFRFLGSLLL 11 103 663.3825124521845 0 663.3840209841728 PEAK CID FTMS 0 0 0 13831 434354.4375 0.5335335573563826 9 -0.5462112426757812 12 Unmodified _PYFRFLGSLLL_ REV__ENST00000284240.9_1_11:119289797-119290019:-|nuORF 15.248480904072842 0.4017935032673427 3 {M(Oxidation (M))|F} 1 -1 6.7217 0.0 0.0 0.50739 0.0 0.0 856.538266015894 318.1098303804472 1174.648096396341 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.50739 + + 69 + 1 1.033 46902.9 1.0 8325 5516 13831 HBL1_DMSO_200M_050219_1,13843 HBL1_DMSO_200M_050219_1,13843,PYFRFLGSLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13844 68.985 262.0 207390.0 25 0 32068.0 -1 0 50 1108.4818655213942 0 1108.478442370892 PEAK CID FTMS 0 0 0 13831 432132.21875 0.8127957708993411 5 -0.19573974609375 13 3 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.20786 0.0 0.0 1702.7535737168134 362.1097313628709 2064.8633050796843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20786 - 12 + 1 1.033 54344.3 1.0 8326 5516 13831 HBL1_DMSO_200M_050219_1,13844 HBL1_DMSO_200M_050219_1,13844, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13845 68.99 230.0 322780.0 25 0 34681.0 + 16971 KIRVKDILY 9 138 574.3618041872978 0 574.3618041872978 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _KIRVKDILY_ REV__ENSG00000134962|ENST00000257408|KLB 2.059750862983233 0.3444685223463734 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.60954 0.0 0.0 352.3015980212768 644.318716698358 996.6203147196348 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.60954 - 58 + 1 1.033 64484.2 1.0 8327 5516 13831 HBL1_DMSO_200M_050219_1,13845 HBL1_DMSO_200M_050219_1,13845,KIRVKDILY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13846 68.996 350.0 662010.0 25 0 86894.0 -1 CVEDPMATV 9 210 341.1481865772767 1020.42273033203 3 340.8148986697197 MULTI CID FTMS 0 0 0 13831 309094.125 0.8876599531499909 6 -0.2787017822265625 15 Carbamidomethyl (C) _C(Carbamidomethyl (C))VEDPMATV_ ENSG00000177302|ENST00000321105|TOP3A;ENST00000469739.6_1_17:18188617-18210429:-|nuORF;nc|ENSG00000177302|Q13472-2|TOP3A;nc|ENSG00000177302|Q13472-3|TOP3A 12.240655878213236 0.5053430591993562 3 YVE 3 -1 22.976 0.0 0.0 2.2516 0.0 0.0 0.0 626.2050910537303 626.2050910537303 10.501896823007826 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 YVE 2.2516 - 87 + 1 1.033 185456.3 1.0 8328 5516 13831 HBL1_DMSO_200M_050219_1,13846 HBL1_DMSO_200M_050219_1,13846,CVEDPMATV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13847 69.002 317.0 831190.0 25 0 111450.0 + 12925 GYTISVVI 8 199 426.24605437218537 850.4775558111708 2 426.2458984255791 MULTI CID FTMS 0 0 0 13831 202175.765625 0.0610515550761907 20 -1.51153564453125 16 Unmodified _GYTISVVI_ REV__ENSG00000184954|ENST00000327335|OR6C70 14.581692164780916 0.6954967302934248 3 {[SA]|[TG]}Y{I|L}GGT 7 -1 40.692 0.0 0.0 4.7846 0.0 0.0 0.0 198.14867332509576 198.14867332509576 -1.3685732445076797 0.0 -1.3685732445076797 0.0 0 0.0 1.2218487496163564 1.4071406706489746 0.0 {[SA]|[TG]}Y{I|L}GGT 4.7846 - 1492 1 1.033 203538.2 1.0 8329 5516 13831 HBL1_DMSO_200M_050219_1,13847 HBL1_DMSO_200M_050219_1,13847,GYTISVVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13848 69.008 352.0 338760.0 25 0 38746.0 + 24815 MPKIKMPKI 9 142 362.5571424720684 1084.6495980164052 3 362.2179748415947 MULTI CID FTMS 0 0 0 13831 194979.53125 0.4607654338838901 -11 0.350311279296875 17 Unmodified _MPKIKMPKI_ ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK 17.44264345198275 0.3645313841742926 3 M[KP]{I|L}KMPK{I|L} 9 0 + 35.6 0.0 0.0 3.2822 3.2822 80.208 0.0 0.0 0.0 24.341197389147 8.416375079047505 8.416375079047505 9.397865930283556 0 0.5 0.0 0.0 0.0 + + M[KP]{I|L}KMPK{I|L};M[KP]{I|L}KM{I|L}[KP] 3.2822;2.4157 +;- + 105 + 1 1.033 101139.9 1.0 8330 5516 13831 HBL1_DMSO_200M_050219_1,13848 HBL1_DMSO_200M_050219_1,13848,MPKIKMPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13850 69.012 42.0 2011300.0 25 0 421360.0 -1 0 82 322.21066928674946 642.406785640299 2 322.2104369997978 MULTI CID FTMS 0 0 0 13849 1583945.625 0.4129652936250791 4 -0.1349563598632812 1 3 E{I|L}{I|L}R{I|L} 5 -1 + 61.414 0.0 0.0 9.5601 9.5601 87.784 0.0 0.0 0.0 31.505149978319903 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.0 1.6989700043360187 0.0 0.4247425010840047 E{I|L}{I|L}R{I|L};E{I|L}{I|L}{I|L}R 9.5601;9.0915 -;- 41 + 1 1.018 74374.1 1.0 8331 5517 13849 HBL1_DMSO_200M_050219_1,13850 HBL1_DMSO_200M_050219_1,13850, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13851 69.014 30.0 608040.0 25 0 52931.0 40962 VLVRRDHH 8 46 516.2968084034844 1030.5790638737687 2 516.2961913943291 MULTI CID FTMS 0 0 0 13849 1843711.0 0.4122901398797261 -9 0.3612518310546875 2 Unmodified _VLVRRDHH_ ENSG00000090339|ENST00000264832|ICAM1 0.7936320650641473 0.8195151834710337 3 {I|L} 1 7 10.596 0.0 0.0 1.0282 0.0 0.0 899.4838775718141 0.0 899.4838775718141 0.0 10.595932038596043 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0282 + + 5 + 1 1.018 22344.8 1.0 8332 5517 13849 HBL1_DMSO_200M_050219_1,13851 HBL1_DMSO_200M_050219_1,13851,VLVRRDHH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13852 69.015 38.0 2204600.0 25 0 248450.0 12903 GYAELWVFL 9 103 549.2852363066577 1096.5559196801153 2 549.2866699099541 MULTI CID FTMS 0 0 0 13849 698816.4375 0.063930588228083 -6 0.273773193359375 3 Unmodified _GYAELWVFL_ ENST00000368931.7_1_1:151019351-151019453:+|nuORF 30.22481116460888 0.1466181017706357 3 [YG]TN{I|L}[NG]V{M(Oxidation (M))|F}{I|L} 10 4 + 74.288 0.0 0.0 6.7747 6.7747 86.016 0.0 0.0 0.0 7.867514221455622 15.026975159433531 7.867514221455622 5.0565842292838425 0 0.7302046884880937 1.3010299956639813 1.2544321917401078 1.3807196863200843 [YG]TN{I|L}[NG]V{M(Oxidation (M))|F}{I|L};[YG]T{I|L}N[NG]V{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SN{I|L}[NG]V{M(Oxidation (M))|F}{I|L};{[QS]|[NT]}GY{I|L}[NG]V{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}N[NG]V{M(Oxidation (M))|F}{I|L};[YG]TGG{I|L}[NG]V{M(Oxidation (M))|F}{I|L};{[SA]|[TG]}YN{I|L}[NG]V{M(Oxidation (M))|F}{I|L};[YG]{I|L}TN[NG]V{M(Oxidation (M))|F}{I|L};[YG]T{I|L}GG[NG]V{M(Oxidation (M))|F}{I|L};[Y{I|L}]GTN[NG]V{M(Oxidation (M))|F}{I|L} 6.7747;6.3136;6.0572;6.0185;5.5961;5.4143;5.3137;5.2928;5.2498;5.2479 -;-;-;-;-;-;-;-;-;- 1430 1 1.018 69477.7 1.0 8333 5517 13849 HBL1_DMSO_200M_050219_1,13852 HBL1_DMSO_200M_050219_1,13852,GYAELWVFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13853 69.019 211.0 866930.0 25 0 35804.0 -1 RCHRRRRRCCC 11 150 866.9067123982009 1731.7988718632016 2 867.4044067263603 MULTI CID FTMS 0 0 0 13849 748321.875 0.0415841107550938 40 -3.0632095336914062 4 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.3070304955306653 0.8736993455979228 3 [NP]{I|L}NA[QP]QDAD{I|L}NP[EP] 16 -1 + 94.049 0.0 0.0 5.4307 5.4307 75.621 0.0 0.0 0.0 16.020599913279625 7.659167939666318 7.659167939666318 1.0551018476997456 0 0.0 1.2218487496163564 0.3807196863200844 2.2262809413564644 [NP]{I|L}NA[QP]QDAD{I|L}NP[EP];[NP]{I|L}NA[QP]QDAD{I|L}GGP[EP];[NP]{I|L}NM[RH]DAD{I|L}NP[EP];[NP]{I|L}NM[RH]DAD{I|L}GGP[EP];[NP]{I|L}NA[QP]QWNNNP[EP];[NP]{I|L}NA[QP]QWNNGGP[EP];[NP]{I|L}GGA[QP]QDAD{I|L}NP[EP];[NP]{I|L}NA[QP][AG]DAD{I|L}NP[EP];[NP]{I|L}GGA[QP]QDAD{I|L}GGP[EP];[NP]{I|L}NA[QP][AG]DAD{I|L}GGP[EP] 5.4307;5.3698;5.1998;5.1379;5.0204;4.9585;4.9102;4.9102;4.8502;4.8502 -;-;-;-;-;-;-;-;-;- 30989 1 1.018 122356.7 1.0 8334 5517 13849 HBL1_DMSO_200M_050219_1,13853 HBL1_DMSO_200M_050219_1,13853,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13854 69.024 296.0 432110.0 25 0 48607.0 -1 0 97 1047.7763792682945 3140.307308405084 3 1048.451831042767 MULTI CID FTMS 0 0 0 13849 298610.0 0.2160111452520508 -6 0.273773193359375 5 3 T{I|L}VY 4 -1 14.412 0.0 0.0 0.45895 0.0 0.0 2009.7043553794963 651.3249390998585 2661.0292944793546 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L}VY 0.45895 - 314 + 1 1.018 97956.5 1.0 8335 5517 13849 HBL1_DMSO_200M_050219_1,13854 HBL1_DMSO_200M_050219_1,13854, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13855 69.03 311.0 225730.0 25 0 17723.0 -1 0 62 1024.4852239332974 2046.9558949333948 2 1024.488330066204 MULTI CID FTMS 0 0 0 13849 174197.03125 0.4986823304349195 4 -0.1349563598632812 6 3 NTV 3 -1 7.6239 0.0 0.0 0.37245 0.0 0.0 1100.521577647486 629.2591036432249 1729.7806812907106 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 NTV 0.37245 - 225 + 1 1.018 53544.7 1.0 8336 5517 13849 HBL1_DMSO_200M_050219_1,13855 HBL1_DMSO_200M_050219_1,13855, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13857 69.04 446.0 161840.0 25 0 21488.0 -1 0 90 1028.975878894329 0 1028.975878894329 PEAK CID FTMS 0 0 0 -1 0 1 3 {I|L}QKP 4 -1 12.013 0.0 0.0 0.58433 0.0 0.0 1261.4635853259645 325.1528414361938 1586.6164267621582 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 {I|L}QKP 0.58433 - 379 + 1 1.018 53630.5 1.0 8337 5518 13856 HBL1_DMSO_200M_050219_1,13857 HBL1_DMSO_200M_050219_1,13857, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13858 69.046 330.0 1346500.0 25 0 94815.0 24277 MAPRTVLL 8 208 450.76995447169656 899.5253560101931 2 450.7708007693291 MULTI CID FTMS 0 0 0 13856 553326.375 0.0894791383503407 -7 0.2957305908203125 2 Unmodified _MAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 36.12702656103203 0.299085846329477 3 MAPD{I|L}{I|L}K 7 4 45.517 0.0 0.0 5.0601 0.0 0.0 0.0 128.07216821842033 128.07216821842033 10.20303756120385 0.0 0.0 0.0 0 1.0228787452803376 1.5228787452803376 0.0 0.2302046884880938 MAPD{I|L}{I|L}K 5.0601 - 2226 + 1 1.018 337253.8 1.0 8338 5518 13856 HBL1_DMSO_200M_050219_1,13858 HBL1_DMSO_200M_050219_1,13858,MAPRTVLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13859 69.052 334.0 223440.0 25 0 9956.9 + -1 YPHAVGKNTLLI 12 113 662.9788907377349 1985.9148428134044 3 662.9794189333916 MULTI CID FTMS 0 0 0 13856 431852.875 0.4627854857946042 9 -0.616943359375 3 ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656-2|DDOST 3 [{I|L}T]N[YG]TV 7 -1 19.504 0.0 0.0 0.98212 0.0 0.0 0.0 1234.5160750734233 1234.5160750734233 3.7737869593058857 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.1203715150305282 0.805462187404089 [{I|L}T]N[YG]TV 0.98212 - 987 1 1.018 61450.3 1.0 8339 5518 13856 HBL1_DMSO_200M_050219_1,13859 HBL1_DMSO_200M_050219_1,13859, False False YPHAVGKNTLLI 69.051887 662.979418933392 28908921.0 13856.0 ENSG00000244038|ENST00000602624|DDOST;;nc|ENSG00000244038|P39656|DDOST;;nc|ENSG00000244038|P39656-3|DDOST;;nc|ENSG00000244038|P39656-2|DDOST 4.8364542325337725 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13860 69.061 497.0 543680.0 25 0 104730.0 + 25154 MRFCLASSLQF 11 172 434.8819673758909 0 434.8815490603447 PEAK CID FTMS 0 0 0 13856 209737.515625 0.8014953818125191 1 -0.0472488403320312 4 Unmodified _MRFCLASSLQF_ REV__ENST00000475308.1_1_5:131726319-131729961:+|nuORF;REV__nc|ENSG00000197375|O76082-2|SLC22A5 4.897010918128616 0.4761840153648597 3 {I|L}Y 2 -1 7.9588 0.0 0.0 0.91718 0.0 0.0 433.5331475429943 155.04664026431877 588.5797878073131 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y 0.91718 - 45 + 1 1.018 222217.3 1.0 8340 5518 13856 HBL1_DMSO_200M_050219_1,13860 HBL1_DMSO_200M_050219_1,13860,MRFCLASSLQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13861 69.069 496.0 146840.0 25 0 19717.0 -1 0 75 1121.072070300579 0 1121.072070300579 PEAK CID FTMS 0 0 0 -1 0 5 3 VTVTN{I|L} 6 -1 47.133 0.0 0.0 2.104 0.0 0.0 1291.639732786902 318.1103609674438 1609.7500937543457 0.0 0.0 0.0 0.0 0 0.0 0.0 1.385151878060192 1.3807196863200843 VTVTN{I|L} 2.104 - 1158 + 1 1.018 55583.5 1.0 8341 5518 13856 HBL1_DMSO_200M_050219_1,13861 HBL1_DMSO_200M_050219_1,13861, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13862 69.077 440.0 203450.0 25 0 6230.9 + -1 HFFQQFFSSC 10 116 667.7841516316939 1333.5537503301878 2 668.2861205935478 MULTI CID FTMS 0 0 0 13856 169455.625 0.6118926709259862 -1 0.0219573974609375 6 Carbamidomethyl (C) _HFFQQFFSSC(Carbamidomethyl (C))_ REV__ENSG00000008405|ENST00000008527|CRY1 6.723162845929126 0.6955379296933136 3 CTV 3 -1 13.544 0.0 0.0 1.0156 0.0 0.0 1012.4212344872108 0.0 1012.4212344872108 0.0 4.252057161061275 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 CTV 1.0156 - 156 + 1 1.018 71365.0 1.0 8342 5518 13856 HBL1_DMSO_200M_050219_1,13862 HBL1_DMSO_200M_050219_1,13862,HFFQQFFSSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13864 69.081 4.9 4930000.0 25 0 789130.0 + 4472 DAYALNHTLSV 11 50 602.3037908596431 1202.593028786086 2 602.3041259646416 MULTI CID FTMS 0 0 0 13863 12453823.0 0.9150855548084448 -2 0.0692062377929687 1 Unmodified _DAYALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 30.7034409873982 0.3712764582118616 3 {[DA]|[EG]}YA 4 7 34.654 0.0 0.0 2.8816 0.0 0.0 0.0 779.4045576769641 779.4045576769641 22.179250024847263 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 + {[DA]|[EG]}YA 2.8816 + + 26 1 1.018 20711.5 1.0 8343 5519 13863 HBL1_DMSO_200M_050219_1,13864 HBL1_DMSO_200M_050219_1,13864,DAYALNHTLSV False True DAYALNHTLSV 69.081364 602.304125964642 355265536.0 13863.0 ENSG00000110777|ENST00000393067|POU2AF1 9.386603355407717 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13865 69.083 13.0 3558200.0 25 0 598600.0 9253 FHKAGRQR 8 68 500.2833317178364 998.5521105024728 2 500.2834045290947 MULTI CID FTMS 0 0 0 13863 3794141.0 0.7604963487409633 -2 0.0692062377929687 2 Unmodified _FHKAGRQR_ ENSG00000163913|ENST00000348417|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-11|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;nc|ENSG00000163913|Q9HBG6-7|IFT122;nc|ENSG00000163913|Q9HBG6-8|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122 2.577480529830294 0.808687252328423 3 {I|L} 1 8 10.379 0.0 0.0 1.0394 0.0 0.0 867.4571988587212 0.0 867.4571988587212 0.0 10.37860356969059 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0394 - 6 + 1 1.018 42379.9 1.0 8344 5519 13863 HBL1_DMSO_200M_050219_1,13865 HBL1_DMSO_200M_050219_1,13865,FHKAGRQR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13866 69.084 36.0 681740.0 25 0 109550.0 + 37742 TLRCKIGWI 9 50 545.316766575885 1088.61898021857 2 545.3172485232353 MULTI CID FTMS 0 0 0 13863 1288483.25 0.8474468195132675 17 -1.3815460205078125 3 Unmodified _TLRCKIGWI_ REV__ENSG00000145604|ENST00000274255|SKP2;REV__nc|ENSG00000145604|Q13309-4|SKP2 2.302733041254933 0.8342969208511092 3 V 1 -1 10.596 0.0 0.0 0.97334 0.0 0.0 971.5396096514786 0.0 971.5396096514786 0.0 10.595932038596043 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.97334 - 2 + 1 1.018 29469.8 1.0 8345 5519 13863 HBL1_DMSO_200M_050219_1,13866 HBL1_DMSO_200M_050219_1,13866,TLRCKIGWI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13867 69.089 268.0 362060.0 25 0 141300.0 -1 0 41 1187.8057213000716 3560.3953345004147 3 1188.475512683392 MULTI CID FTMS 0 0 0 13863 1051832.0 0.8310858365529555 3 -0.148712158203125 4 3 {M(Oxidation (M))|F}Y 2 -1 8.5835 0.0 0.0 0.24108 0.0 0.0 1384.4829332326397 1862.7710765907264 3247.254009823366 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.24108 - 16 + 1 1.018 86130.3 1.0 8346 5519 13863 HBL1_DMSO_200M_050219_1,13867 HBL1_DMSO_200M_050219_1,13867, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13868 69.095 320.0 548830.0 25 0 39771.0 + 11605 GLADASLLKKV 11 159 557.8451592420321 0 557.8452636599541 PEAK CID FTMS 0 0 0 13863 384052.4375 1.0 0 0.0 5 Unmodified _GLADASLLKKV_ ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10 35.61225514009592 0.1724521961472362 3 AADAS{I|L}{I|L}K 8 4 30.303 0.0 0.0 2.721 0.0 0.0 99.07193864066764 242.1517733209594 341.22371196162703 0.0 0.0 0.0 0.0 0 1.066901560044258 0.0 0.0 0.0 AADAS{I|L}{I|L}K 2.721 - 723 + 1 1.018 134632.2 1.0 8347 5519 13863 HBL1_DMSO_200M_050219_1,13868 HBL1_DMSO_200M_050219_1,13868,GLADASLLKKV False True GLADASLLKKV 69.094543 557.845263659954 2553089.25 13863.0 nc|ENSG00000130638|Q9UBB4-2|ATXN10;;ENSG00000130638|ENST00000252934|ATXN10 6.068705081939697 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13869 69.1 322.0 238060.0 25 0 27696.0 + 10273 FQWEDEKLSGA 11 105 655.3068465923551 1308.59914025151 2 655.8073608279228 MULTI CID FTMS 0 0 0 13863 394279.125 0.8966342243510738 -2 0.0692062377929687 6 Unmodified _FQWEDEKLSGA_ ENSG00000168228|ENST00000302874|ZCCHC4;ENST00000505451.5_1_4:25314431-25353701:+|nuORF;nc|ENSG00000168228|Q9H5U6-2|ZCCHC4;nc|ENSG00000168228|Q9H5U6-3|ZCCHC4 27.22323531849824 0.4529927607131788 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L} 7 8 32.64 0.0 0.0 2.4943 0.0 0.0 0.0 474.1278627459039 474.1278627459039 16.948840019520183 0.0 0.0 0.0 0 0.5 0.958607314841775 0.3807196863200844 0.4247425010840047 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L} 2.4943 - 227 1 1.018 61819.9 1.0 8348 5519 13863 HBL1_DMSO_200M_050219_1,13869 HBL1_DMSO_200M_050219_1,13869,FQWEDEKLSGA False True FQWEDEKLSGA 69.10042 655.807360827923 3433242.5 13863.0 nc|ENSG00000168228|Q9H5U6-3|ZCCHC4;;ENSG00000168228|ENST00000302874|ZCCHC4;;nc|ENSG00000168228|Q9H5U6-2|ZCCHC4;;ENST00000505451.5_1_4:25314431-25353701:+|nuORF 4.743405342102051 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13870 69.106 331.0 356180.0 25 0 28550.0 26015 NLYHSDFQG 9 156 540.7394566581046 0 540.7399780154228 PEAK CID FTMS 0 0 0 13863 354662.59375 0.9748492699884762 6 -0.4162216186523437 7 Unmodified _NLYHSDFQG_ ENST00000568676.5_1_16:56966069-56969519:+|nuORF 7.289230182591677 0.3433663536648894 3 {I|L}E 2 8 7.0783 0.0 0.0 0.65573 0.0 0.0 316.1750910142983 518.1388643854124 834.3139553997107 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E 0.65573 - 40 + 1 1.018 93058.6 1.0 8349 5519 13863 HBL1_DMSO_200M_050219_1,13870 HBL1_DMSO_200M_050219_1,13870,NLYHSDFQG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13871 69.115 490.0 541880.0 25 0 58272.0 + 4382 DAVKILKL 8 227 300.5357808155029 898.5855130467087 3 300.5356323122978 MULTI CID FTMS 0 0 0 13863 334391.125 0.8042321918321458 -2 0.0692062377929687 8 Unmodified _DAVKILKL_ ENSG00000107290|ENST00000224140|SETX;ENST00000477049.1_1_9:135139628-135141576:-|nuORF;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX 28.486842064014134 0.4448922141344407 3 {[DA]|[EG]}VK{I|L}{I|L}K{I|L} 8 0 + 61.365 0.0 0.0 6.829 6.829 85.799 0.0 0.0 0.0 19.463950151760656 6.270987253958744 6.270987253958744 4.771212547196626 0 0.3054621874040891 1.6989700043360187 0.0 0.2215141619232908 + + {[DA]|[EG]}VK{I|L}{I|L}K{I|L};{[DA]|[EG]}V{I|L}K{I|L}K{I|L};{[DA]|[EG]}{I|L}VK{I|L}K{I|L};{[DA]|[EG]}VK{I|L}{I|L}{I|L}K;{[DA]|[EG]}V{I|L}K{I|L}{I|L}K;{[DA]|[EG]}{I|L}VK{I|L}{I|L}K 6.829;6.2981;6.2298;6.1312;5.6002;5.5319 +;-;-;-;-;- + 163 + 1 1.018 213395.8 1.0 8350 5519 13863 HBL1_DMSO_200M_050219_1,13871 HBL1_DMSO_200M_050219_1,13871,DAVKILKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13872 69.124 479.0 448010.0 25 0 22746.0 + 38559 TSVKEAYLEV 10 200 380.2054502851693 1137.594521455708 3 380.2062560915947 MULTI CID FTMS 0 0 0 13863 313858.375 0.7829956518207173 -2 0.0692062377929687 9 Unmodified _TSVKEAYLEV_ REV__ENST00000407121.1_1_6:100023791-100023977:+|nuORF 18.1463463914782 0.5430639438673815 3 {[QN]|[E{I|L}]|[KN]}HYHV{I|L}EV 9 -1 + 34.176 0.0 0.0 3.0042 3.0042 79.764 0.0 0.0 0.0 9.642392181471102 7.191964632593585 7.191964632593585 9.642392181471102 0 0.4859856381998781 0.721246399047171 1.805462187404089 0.0 {[QN]|[E{I|L}]|[KN]}HYHV{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[WQ]HV{I|L}EV;HH{I|L}V{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P;[YV]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{I|L}QQ;[{M(Oxidation (M))|F}V]{I|L}VH[EP][QA]V;[{M(Oxidation (M))|F}V]{I|L}VEAKW{M(Oxidation (M))|F};HH{I|L}V{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}M{I|L};{[QN]|[E{I|L}]|[KN]}[YV]{M(Oxidation (M))|F}V{I|L}QQ;[YT]{I|L}VH[Y{M(Oxidation (M))|F}]PV;HH{I|L}V{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F} 3.0042;2.1566;1.9471;1.8086;1.6645;1.5989;1.5727;1.4621;1.3445;1.308 -;-;-;-;-;-;-;-;-;- 910 1 1.018 181836.6 1.0 8351 5519 13863 HBL1_DMSO_200M_050219_1,13872 HBL1_DMSO_200M_050219_1,13872,TSVKEAYLEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13873 69.131 388.0 351390.0 25 0 75755.0 -1 0 105 930.4432755710624 0 930.441943347454 PEAK CID FTMS 0 0 0 13863 199299.0 0.38134905776245 -7 0.2873458862304687 10 3 {I|L}GD{I|L}D 5 -1 27.365 0.0 0.0 1.4721 0.0 0.0 1133.5479760421874 209.05718408756096 1342.6051601297484 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6307196863200843 0.0 {I|L}GD{I|L}D 1.4721 - 748 + 1 1.018 91504.7 1.0 8352 5519 13863 HBL1_DMSO_200M_050219_1,13873 HBL1_DMSO_200M_050219_1,13873, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13875 69.135 28.0 1269400.0 25 0 154350.0 + 13980 HYYDSTIEL 9 58 570.7641274571915 1139.513701981183 2 570.7642089724541 MULTI CID FTMS 0 0 0 13874 1647373.0 0.4332320232982399 -3 0.1225357055664062 1 Unmodified _HYYDSTIEL_ ENSG00000100453|ENST00000216341|GZMB;ENST00000526004.1_1_14:25101006-25102204:-|nuORF 44.40701690623563 0.0526327925666318 3 {[WN]|[YH]}{[YD]|[{M(Oxidation (M))|F}M]}{[MG]|[TS]}{I|L}{[QN]|[E{I|L}]|[KN]} 9 0 + 26.646 0.0 0.0 2.3384 2.3384 80.057 0.0 0.0 0.0 2.265443323981419 7.989313835018169 2.265443323981419 14.76158414573064 0 0.3807196863200844 1.0969100130080565 0.9247425010840048 0.0 + + {[WN]|[YH]}{[YD]|[{M(Oxidation (M))|F}M]}{[MG]|[TS]}{I|L}{[QN]|[E{I|L}]|[KN]};{[WN]|[YH]}{[YD]|[{M(Oxidation (M))|F}M]}[WP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.3384;1.0429 +;- + 26 1 1.037 33906.0 1.0 8353 5520 13874 HBL1_DMSO_200M_050219_1,13875 HBL1_DMSO_200M_050219_1,13875,HYYDSTIEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13876 69.143 461.0 484270.0 25 0 263800.0 -1 0 74 1096.461420544231 3286.3624322328933 3 1096.797656238079 MULTI CID FTMS 0 0 0 13874 77301.34375 0.1161205864288113 4 -0.26513671875 2 3 N{M(Oxidation (M))|F}VENG 6 -1 48.893 0.0 0.0 1.4877 0.0 0.0 2206.8318669026185 416.1946200006469 2623.0264869032653 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1861818737241736 1.4802046884880935 N{M(Oxidation (M))|F}VENG 1.4877 - 966 + 1 1.037 152422.2 1.0 8354 5520 13874 HBL1_DMSO_200M_050219_1,13876 HBL1_DMSO_200M_050219_1,13876, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13878 69.147 8.0 8897600.0 25 0 1027800.0 40357 VHQEQPHM 8 66 503.2318295443582 1004.4491061555163 2 503.2320129275322 MULTI CID FTMS 0 0 0 13877 3845562.5 0.1494330999409271 6 -0.5039443969726562 1 Unmodified _VHQEQPHM_ ENST00000420513.1_1_1:16920245-16935062:-|nuORF;ENST00000467103.2_1_1:21771652-21776292:+|nuORF 7.910154910731844 0.7763180056447161 3 V{M(Oxidation (M))|F} 2 6 20.969 0.0 0.0 2.0876 0.0 0.0 0.0 755.3066784276225 755.3066784276225 10.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{M(Oxidation (M))|F} 2.0876 - 37 + 1 1.037 62042.1 1.0 8355 5521 13877 HBL1_DMSO_200M_050219_1,13878 HBL1_DMSO_200M_050219_1,13878,VHQEQPHM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13879 69.148 6.7 10847000.0 25 0 785680.0 + 41412 VPLDKQITI 9 96 513.8132827839034 1025.6120126346068 2 513.8135253787041 MULTI CID FTMS 0 0 0 13877 14954815.0 1.0 0 0.0 2 Unmodified _VPLDKQITI_ ENSG00000163938|ENST00000418458|GNL3;nc|ENSG00000163938|Q9BVP2-2|GNL3 66.45667989310934 0.0225072657982126 3 [VP]EKQ{I|L}TV{I|L} 9 3 + 70.473 0.0 0.0 6.8713 6.8713 82.869 0.0 0.0 0.0 7.786596949921218 11.940790073157892 7.786596949921218 2.7865969499212184 0 0.3807196863200844 2.0 0.7614393726401688 0.0 [VP]EKQ{I|L}TV{I|L};[VP]EKQ{I|L}VT{I|L};[VP]EKQT{I|L}V{I|L};[VP]EKQV{I|L}T{I|L};[{I|L}P]DKQ{I|L}TV{I|L};[VP]EK[AG]{I|L}TV{I|L};[VP]{I|L}[SG]Q{I|L}TV{I|L};[{I|L}P]DKQ{I|L}VT{I|L};[{I|L}P]DKQT{I|L}V{I|L};[VP]EK[AG]{I|L}VT{I|L} 6.8713;6.5996;6.5658;6.4322;6.1121;5.9735;5.9723;5.8404;5.8066;5.7018 -;-;-;-;-;-;-;-;-;- 1205 1 1.037 67852.1 1.0 8356 5521 13877 HBL1_DMSO_200M_050219_1,13879 HBL1_DMSO_200M_050219_1,13879,VPLDKQITI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13880 69.149 13.0 5753400.0 25 0 765340.0 -1 0 69 320.211539464139 319.204262997539 1 320.2112914919853 MULTI CID FTMS 0 0 0 13877 6738710.5 1.0 0 0.0 3 3 PH 2 -1 35.044 0.0 0.0 10.979 0.0 0.0 0.0 82.06712518863515 82.06712518863515 4.9447660690928 0.0 0.0 0.0 0 0.805462187404089 1.3010299956639813 0.0 0.0 PH 10.979 - 14 + 1 1.037 68493.7 1.0 8357 5521 13877 HBL1_DMSO_200M_050219_1,13880 HBL1_DMSO_200M_050219_1,13880, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13881 69.151 26.0 2075700.0 25 0 152670.0 + 21823 LPNNRELYI 9 69 566.3115234879363 1130.6084940426724 2 566.3118163943291 MULTI CID FTMS 0 0 0 13877 3557109.5 0.8428510329760943 5 -0.3784103393554687 4 Unmodified _LPNNRELYI_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78110025-78110175:-|nuORF 44.391923383255 0.0526658857881241 3 {I|L}PNN 4 5 48.448 0.0 0.0 4.2852 0.0 0.0 0.0 689.3658541315061 689.3658541315061 15.25621490810046 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.3494850021680094 + {I|L}PNN 4.2852 + + 87 + 1 1.037 48330.9 1.0 8358 5521 13877 HBL1_DMSO_200M_050219_1,13881 HBL1_DMSO_200M_050219_1,13881,LPNNRELYI True True LPNNRELYI 69.150649 566.311816394329 223763040.0 13877.0 ENSG00000141543|ENST00000649764|EIF4A3;;ENST00000575978.1_1_17:78110025-78110175:-|nuORF 5.581648667653401 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13882 69.152 29.0 1238800.0 25 0 202650.0 + -1 VSSCLWIML 9 48 562.775056806722 1123.535560680244 2 562.7757446169853 MULTI CID FTMS 0 0 0 13877 3267829.25 0.378623835523144 5 -0.3784103393554687 5 Carbamidomethyl (C),Oxidation (M) _VSSC(Carbamidomethyl (C))LWIM(Oxidation (M))L_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|195|1|anti-sense 7.910154910731844 0.6385446671287552 3 [VS]VD{I|L}TR 7 -1 58.231 0.0 0.0 5.1829 0.0 0.0 0.0 350.0862825983032 350.0862825983032 58.23145724778165 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [VS]VD{I|L}TR 5.1829 - 37 + 1 1.037 33477.5 1.0 8359 5521 13877 HBL1_DMSO_200M_050219_1,13882 HBL1_DMSO_200M_050219_1,13882,VSSCLWIML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13883 69.153 30.0 2097600.0 25 0 326140.0 + 17860 KQLEEAIQL 9 83 536.305645550056 1070.596738166912 2 536.3054687380791 MULTI CID FTMS 0 0 0 13877 2714323.0 0.7809128933328433 5 -0.3784103393554687 6 Unmodified _KQLEEAIQL_ ENSG00000119397|ENST00000373855|CNTRL;ENST00000373851.6_1_9:123874787-123912836:+|nuORF;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 69.10491478415734 0.0214449631113747 3 [AG]{I|L}KEEA{I|L}Q{I|L} 10 3 + 87.359 0.0 0.0 8.1598 8.1598 91.991 0.0 0.0 0.0 8.330081067366535 16.53212513775344 8.330081067366535 8.330081067366535 0 0.3807196863200844 1.6989700043360187 1.5356668758921828 0.7134679910804405 [AG]{I|L}KEEA{I|L}Q{I|L};[Q{I|L}]KEEA{I|L}Q{I|L};[AG]{I|L}KEAE{I|L}Q{I|L};[AG]{I|L}KEEA{I|L}[AG]{I|L};[Q{I|L}]KEAE{I|L}Q{I|L};[Q{I|L}]KEEA{I|L}[AG]{I|L};[AG]{I|L}KEAE{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[KQ]EA{I|L}Q{I|L};[Q{I|L}]KEAE{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[KQ]AE{I|L}Q{I|L} 8.1598;7.3818;7.3174;7.3038;6.5394;6.5217;6.4614;6.076;5.6793;5.2336 -;-;-;-;-;-;-;-;-;- 444 1 1.037 52394.8 1.0 8360 5521 13877 HBL1_DMSO_200M_050219_1,13883 HBL1_DMSO_200M_050219_1,13883,KQLEEAIQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13884 69.155 94.0 781000.0 25 0 113750.0 + 3144 AVQLILIFY 9 112 540.3303624236495 1078.6461719140989 2 540.3303710818291 MULTI CID FTMS 0 0 0 13877 1810516.25 1.0 0 0.0 7 Unmodified _AVQLILIFY_ REV__ENST00000465224.5_1_2:97490916-97493694:+|nuORF 4.75600775471527 0.7486543447549536 3 {I|L} 1 -1 10.089 0.0 0.0 0.93531 0.0 0.0 947.5509703533552 0.0 947.5509703533552 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.93531 + + 55 + 1 1.037 64877.0 1.0 8361 5521 13877 HBL1_DMSO_200M_050219_1,13884 HBL1_DMSO_200M_050219_1,13884,AVQLILIFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13885 69.157 94.0 790870.0 25 0 107850.0 + 32526 SALPYVNNV 9 113 488.7585517342304 975.5025505352608 2 488.7584106326103 MULTI CID FTMS 0 0 0 13877 1764178.75 1.0 0 0.0 8 Unmodified _SALPYVNNV_ ENSG00000166986|ENST00000262027|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF;nc|ENSG00000166986|P56192-2|MARS1 19.256988751693697 0.3154191944385105 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VND 5 5 43.205 0.0 0.0 4.429 0.0 0.0 0.0 384.2233506663733 384.2233506663733 16.09673323955724 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2887254899964357 0.3494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VND 4.429 - 432 1 1.037 58553.0 1.0 8362 5521 13877 HBL1_DMSO_200M_050219_1,13885 HBL1_DMSO_200M_050219_1,13885,SALPYVNNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13886 69.158 20.0 1466400.0 25 0 179360.0 -1 0 41 653.3283259436264 1956.963148431079 3 653.6622192263603 MULTI CID FTMS 0 0 0 13877 993228.5625 0.1856314966585609 14 -1.2540512084960938 9 3 C[VG] 3 -1 8.9524 0.0 0.0 0.45747 0.0 0.0 1679.8556788039289 0.0 1679.8556788039289 0.0 4.348331157524969 0.0 0.0 0 0.0 0.0 0.0 0.0 C[VG] 0.45747 - 29 + 1 1.037 31999.4 1.0 8363 5521 13877 HBL1_DMSO_200M_050219_1,13886 HBL1_DMSO_200M_050219_1,13886, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13887 69.163 274.0 698680.0 25 0 122600.0 + 30732 RGLDVDGIYRV 11 123 631.8468676677677 1261.6791824023353 2 631.8468505740166 MULTI CID FTMS 0 0 0 13877 777166.3125 1.0 0 0.0 10 Unmodified _RGLDVDGIYRV_ ENSG00000075884|ENST00000295095|ARHGAP15;ENSG00000123329|ENST00000393791|ARHGAP9;ENST00000546704.1_1_12:57868176-57868820:-|nuORF;ENST00000549436.5_1_2:144276854-144461094:+|nuORF;nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;nc|ENSG00000123329|Q9BRR9-4|ARHGAP9;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;nc|ENSG00000123329|Q9BRR9|ARHGAP9 41.34703777101937 0.1916454788238683 3 VG{[RE]|[WV]}VDVS{M(Oxidation (M))|F}RV 11 6 + 77.943 0.0 0.0 6.1777 6.1777 82.996 0.0 0.0 0.0 51.32246111520904 10.867067824155512 10.867067824155512 4.247425010840061 0 1.274227503252014 1.3979400086720375 0.3494850021680094 0.9247425010840048 VG{[RE]|[WV]}VDVS{M(Oxidation (M))|F}RV;VG{I|L}[RD]DVS{M(Oxidation (M))|F}RV;VG{[RE]|[WV]}VDSV{M(Oxidation (M))|F}RV;VG{I|L}[RD]DSV{M(Oxidation (M))|F}RV;VV{[QD]|[EN]|[WG]|[KD]|[RS]}VDVS{M(Oxidation (M))|F}RV;VG{I|L}[DG]VDVHRPV;VVA[RD]DVS{M(Oxidation (M))|F}RV;VV{[QD]|[EN]|[WG]|[KD]|[RS]}VDSV{M(Oxidation (M))|F}RV;VG{[RE]|[WV]}VDV[Y{I|L}]NV;VVA[RD]DSV{M(Oxidation (M))|F}RV 6.1777;5.8411;5.7996;5.4629;5.4479;5.209;5.1113;5.0697;4.7704;4.7331 -;-;-;-;-;-;-;-;-;- 2536 + 1 1.037 140686.1 1.0 8364 5521 13877 HBL1_DMSO_200M_050219_1,13887 HBL1_DMSO_200M_050219_1,13887,RGLDVDGIYRV False True RGLDVDGIYRV 69.16337 631.846850574017 4603010.0 13877.0 ENST00000549436.5_1_2:144276854-144461094:+|nuORF;;nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;;ENSG00000123329|ENST00000393791|ARHGAP9;;ENST00000546704.1_1_12:57868176-57868820:-|nuORF;;ENSG00000075884|ENST00000295095|ARHGAP15;;nc|ENSG00000123329|Q9BRR9|ARHGAP9;;nc|ENSG00000123329|Q9BRR9-4|ARHGAP9 5.415340264638265 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13888 69.165 80.0 818920.0 25 0 73833.0 + + 20883 FPPPVSPRL 9 105 505.2953496733442 1008.5761464134883 2 505.2954589724541 MULTI CID FTMS 0 0 0 13877 556273.375 0.9685173275703532 2 -0.110595703125 11 Unmodified _LMPLHAKTV_ ENSG00000114423|ENST00000394030|CBLB 26.88365393820708 0.1891292719743517 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PY 4 -1 40.42 0.0 0.0 4.0076 0.0 0.0 0.0 501.3261785526223 501.3261785526223 28.63682608455539 0.0 0.0 0.0 0 1.325257498915995 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PY 4.0076 - 145 1 1.037 54109.9 1.0 8365 5521 13877 HBL1_DMSO_200M_050219_1,13888 HBL1_DMSO_200M_050219_1,13888,LMPLHAKTV False False FPPPVSPRL 69.165184 505.295458972454 9246090.0 13877.0 ENSG00000114423|ENST00000394030|CBLB 3.1676061153411865 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13889 69.173 427.0 308480.0 25 0 31757.0 + 23684 LTSPKKTV 8 171 437.2747878747453 0 437.2910644412041 PEAK CID FTMS 0 0 0 13877 406865.0625 1.0 0 0.0 12 Unmodified _LTSPKKTV_ REV__ENST00000399543.1_1_5:43042205-43042844:+|nuORF 4.3292370932331545 0.5842320662952245 3 V 1 -1 4.6041 0.0 0.0 0.52767 0.0 0.0 436.2873418659058 334.15315956135026 770.4405014272561 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.52767 + + 21 + 1 1.037 102138.0 1.0 8366 5521 13877 HBL1_DMSO_200M_050219_1,13889 HBL1_DMSO_200M_050219_1,13889,LTSPKKTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13890 69.179 368.0 477480.0 25 0 34343.0 + 16338 IYLEGKIDY 9 173 557.2960667083973 1112.5775804835946 2 557.2966796755791 MULTI CID FTMS 0 0 0 13877 460175.71875 1.0 0 0.0 13 Unmodified _IYLEGKIDY_ ENSG00000106028|ENST00000265304|SSBP1;ENST00000489378.5_1_7:141438966-141445458:+|nuORF 36.506200033944 0.094635877243972 3 {I|L}Y{I|L}EG 5 4 62.479 0.0 0.0 5.6157 0.0 0.0 0.0 534.2586153619749 534.2586153619749 23.51764532675596 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.7614393726401688 0.0 + {I|L}Y{I|L}EG 5.6157 + + 3653 + 1 1.037 134900.5 1.0 8367 5521 13877 HBL1_DMSO_200M_050219_1,13890 HBL1_DMSO_200M_050219_1,13890,IYLEGKIDY True True IYLEGKIDY 69.17942 557.296679675579 2744596.75 13877.0 ENST00000489378.5_1_7:141438966-141445458:+|nuORF;;ENSG00000106028|ENST00000265304|SSBP1 3.832250396410624 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13891 69.187 441.0 363420.0 25 0 35215.0 + 25748 NIPNGIPAV 9 176 447.7549827604345 893.4954125876691 2 447.7555724978447 MULTI CID FTMS 0 0 0 13877 447210.71875 1.0 0 0.0 14 Unmodified _NIPNGIPAV_ ENSG00000175455|ENST00000409697|CCDC14;ENST00000495381.5_1_3:123633936-123674711:-|nuORF;nc|ENSG00000175455|Q49A88-2|CCDC14;nc|ENSG00000175455|Q49A88-3|CCDC14;nc|ENSG00000175455|Q49A88-4|CCDC14;nc|ENSG00000175455|Q49A88-5|CCDC14;nc|ENSG00000175455|Q49A88-6|CCDC14;nc|ENSG00000175455|Q49A88|CCDC14 23.1484247019978 0.2366544122328345 3 [PA]AQQ{I|L}[PG]{I|L} 9 7 + 17.434 0.0 0.0 1.9512 1.9512 69.329 0.0 0.0 0.0 1.6318725675766963 6.174794055253511 1.6318725675766963 2.319490765206816 0 0.5 1.0 0.0 0.2396518287104437 [PA]AQQ{I|L}[PG]{I|L};[PA]G[RN]{I|L}[PG]{I|L};[NP]G{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[PG]{I|L};[{I|L}T]A[YT]{[NV]|[RG]}{I|L};[PA]AP{[NV]|[RG]}{[NV]|[RG]}{I|L};[QP][RN]{I|L}[PG]{I|L} 1.9512;1.6916;1.478;0.9918;0.9263;0.52119 -;-;-;-;-;- 168 1 1.037 126216.9 1.0 8368 5521 13877 HBL1_DMSO_200M_050219_1,13891 HBL1_DMSO_200M_050219_1,13891,NIPNGIPAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13892 69.195 452.0 362970.0 25 0 30390.0 11518 GIPAEVPHI 9 160 466.76377751086176 931.5130020885236 2 466.7640258669853 MULTI CID FTMS 0 0 0 13877 378592.625 0.1640310950263728 -7 0.2277755737304687 15 Unmodified _GIPAEVPHI_ ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1 46.92087301778293 0.0471210510596396 3 VAPAEVPH{I|L} 9 2 + 68.86 0.0 0.0 7.3922 7.3922 95.035 0.0 0.0 0.0 34.01866264866343 14.09256854528806 14.09256854528806 22.638860005961064 0 0.2614393726401688 2.0 0.3494850021680094 0.0 VAPAEVPH{I|L};VASTA{I|L}WGK;VAPAEV[H{I|L}]P;VA[KQ]A{I|L}CS{I|L};VAPA[WY]{I|L}{I|L};VAPAQ[YV]GK;VASV[VS]WGK;VA[KQ]{[WT]|[RM]}S{I|L};VA[KQ]A{I|L}CTV;VA[KQ]A{I|L}C{I|L}S 7.3922;4.9619;4.629;4.5164;4.4428;4.0393;3.9185;3.8019;3.7076;3.275 -;-;-;-;-;-;-;-;-;- 1478 + 1 1.037 129370.3 1.0 8369 5521 13877 HBL1_DMSO_200M_050219_1,13892 HBL1_DMSO_200M_050219_1,13892,GIPAEVPHI True True SAVTALWGK 69.195263 466.764025866985 32528068.0 13877.0 ENSG00000244734|ENST00000335295|HBB;;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 4.244528611501058 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13893 69.204 520.0 607420.0 25 0 58707.0 + 38951 TVNGVTYI 8 265 433.7360660425735 865.457579151947 2 433.7356445193291 MULTI CID FTMS 0 0 0 13877 336153.03125 1.0 0 0.0 16 Unmodified _TVNGVTYI_ REV__ENSG00000155052|ENST00000682447|CNTNAP5 26.88365393820708 0.4786498634179528 3 [YT]{I|L}{M(Oxidation (M))|F}K{I|L} 6 -1 36.911 0.0 0.0 4.2649 0.0 0.0 0.0 96.99102539423134 96.99102539423134 15.80021559410823 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YT]{I|L}{M(Oxidation (M))|F}K{I|L} 4.2649 - 3056 1 1.037 243421.0 1.0 8370 5521 13877 HBL1_DMSO_200M_050219_1,13893 HBL1_DMSO_200M_050219_1,13893,TVNGVTYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13894 69.212 445.0 341830.0 25 0 12647.0 21003 LNSLSSTELYY 11 170 645.3174212935763 1288.6202896539526 2 645.3182250857353 MULTI CID FTMS 0 0 0 13877 284261.78125 1.0 0 0.0 17 Unmodified _LNSLSSTELYY_ ENSG00000151718|ENST00000403733|WWC2;nc|ENSG00000151718|Q6AWC2-2|WWC2;nc|ENSG00000151718|Q6AWC2-3|WWC2;nc|ENSG00000151718|Q6AWC2-4|WWC2;nc|ENSG00000151718|Q6AWC2-5|WWC2;nc|ENSG00000151718|Q6AWC2-6|WWC2 20.41453444215458 0.6105011870913812 3 [VS]{I|L}NVDY{I|L}{M(Oxidation (M))|F}GY 11 8 + 51.178 0.0 0.0 3.9715 3.9715 78.869 0.0 0.0 0.0 4.81486060122112 12.45227120021169 4.81486060122112 7.055912674110019 0 0.0 1.3979400086720375 0.4247425010840047 0.0 [VS]{I|L}NVDY{I|L}{M(Oxidation (M))|F}GY;[VS]{I|L}NVDM{I|L}[HV]Y;[VS]{I|L}GGVDY{I|L}{M(Oxidation (M))|F}GY;[YV][HV]YDVN{I|L}[PA];[VS]{I|L}NVDM{I|L}{[WN]|[YH]}V;{[{M(Oxidation (M))|F}H]|[RQ]}VEDY{I|L}{M(Oxidation (M))|F}GY;[VS]{I|L}NVDY[HV]M{I|L};[VS]{I|L}NVD[W{M(Oxidation (M))|F}]NPV;[VS]{I|L}NVDM{I|L}[RD]Q;[VS]{I|L}NVDS{M(Oxidation (M))|F}VNPV 3.9715;3.424;3.2631;3.0054;3.0052;2.9803;2.8952;2.8737;2.8098;2.8062 -;-;-;-;-;-;-;-;-;- 9179 + 1 1.037 114480.6 1.0 8371 5521 13877 HBL1_DMSO_200M_050219_1,13894 HBL1_DMSO_200M_050219_1,13894,LNSLSSTELYY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13895 69.226 715.0 396880.0 25 0 38259.0 30932 RKGAGGKG 8 246 365.7208575865344 0 365.7206909060478 PEAK CID FTMS 0 0 0 13877 196741.40625 1.0 0 0.0 18 Unmodified _RKGAGGKG_ ENSG00000165801|ENST00000298694|ARHGEF40;nc|ENSG00000165801|Q8TER5-3|ARHGEF40;nc|ENSG00000165801|Q8TER5-4|ARHGEF40 0.6903765706972694 0.5983587967854751 3 E 1 8 9.732 0.0 0.0 1.3342 0.0 0.0 131.0937404642812 466.2689907491842 597.3627312134654 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 E 1.3342 - 137 + 1 1.037 219589.6 1.0 8372 5521 13877 HBL1_DMSO_200M_050219_1,13895 HBL1_DMSO_200M_050219_1,13895,RKGAGGKG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13897 69.23 1.1 32269000.0 25 0 4272500.0 + 23293 LSYSQAVTV 9 58 484.25839615362605 966.502239374052 2 484.2593261599541 MULTI CID FTMS 0 0 0 13896 40107764.0 0.0947699621666482 27 -2.1721343994140625 1 Unmodified _LSYSQAVTV_ REV__ENSG00000115145|ENST00000263904|STAM2 15.847184025352805 0.4077185912009129 3 CTV 3 -1 25.674 0.0 0.0 2.6564 0.0 0.0 645.3695317097928 0.0 645.3695317097928 0.0 14.704999916446797 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 CTV 2.6564 - 52 + 1 1.036 34670.2 1.0 8373 5522 13896 HBL1_DMSO_200M_050219_1,13897 HBL1_DMSO_200M_050219_1,13897,LSYSQAVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13898 69.231 2.8 15497000.0 25 0 1631100.0 + 26178 NQFPGFKEV 9 67 533.2720326860506 1064.529512438901 2 533.2724487185478 MULTI CID FTMS 0 0 0 13896 17406378.0 0.4684694553029128 -4 0.1959609985351562 2 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 32.78568957990786 0.1150597335874693 3 SK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 7 7 42.752 0.0 0.0 4.016 0.0 0.0 214.10699660468907 0.0 214.10699660468907 0.0 31.738569581344507 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 SK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 4.016 - 148 1 1.036 38316.6 1.0 8374 5522 13896 HBL1_DMSO_200M_050219_1,13898 HBL1_DMSO_200M_050219_1,13898,NQFPGFKEV True True NQFPGFKEV 69.231255 533.272448718548 3183373824.0 13896.0 ENSG00000125870|ENST00000246071|SNRPB2;;ENST00000407763.2_1_6:149433147-149433330:-|nuORF;;ENSG00000077312|ENST00000243563|SNRPA 8.675048669179281 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13899 69.232 3.8 19824000.0 25 0 2395000.0 + 43844 YFIAPTGHSL 10 88 553.2872852090301 1104.56001748486 2 553.2878295779228 MULTI CID FTMS 0 0 0 13896 12489729.0 0.616174806418737 -1 0.0829620361328125 3 Unmodified _YFIAPTGHSL_ ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11 100.37149154755038 0.0085903855881088 3 Y{M(Oxidation (M))|F}{I|L}APTG 7 3 66.407 0.0 0.0 6.0121 0.0 0.0 0.0 352.1637056940063 352.1637056940063 32.37842840780033 0.0 0.0 0.0 0 1.1989700043360187 0.0 1.5356668758921828 0.0 + Y{M(Oxidation (M))|F}{I|L}APTG 6.0121 + + 485 + 1 1.036 63705.0 1.0 8375 5522 13896 HBL1_DMSO_200M_050219_1,13899 HBL1_DMSO_200M_050219_1,13899,YFIAPTGHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13900 69.234 6.0 12827000.0 25 0 2002300.0 + 40579 VKPSVPLF 8 72 443.7734510303929 885.5323491275858 2 443.7736083865166 MULTI CID FTMS 0 0 0 13896 10206796.0 0.5972226106785561 6 -0.4640884399414062 4 Unmodified _VKPSVPLF_ REV__ENSG00000165792|ENST00000339374|METTL17;REV__ENST00000555902.6_1_14:21458708-21463066:+|nuORF;REV__nc|ENSG00000165792|Q9H7H0-2|METTL17;REV__nc|ENSG00000165792|Q9H7H0-3|METTL17 20.453626601364224 0.6087503291685402 3 {I|L}P 2 -1 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3739380405825 672.3739380405825 15.334237554869503 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}P 5.0564 - 160 + 1 1.036 63401.3 1.0 8376 5522 13896 HBL1_DMSO_200M_050219_1,13900 HBL1_DMSO_200M_050219_1,13900,VKPSVPLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13901 69.235 6.3 6142500.0 25 0 803510.0 + + 21262 LPDGRTLIV 9 63 492.2987000704332 982.5828472076664 2 492.2985107302666 MULTI CID FTMS 0 0 0 13896 7994624.0 0.6947844393990419 -1 0.0829620361328125 5 Unmodified _LPDTRAVIV_ ENSG00000106829|ENST00000376552|TLE4;nc|ENSG00000140332|Q04726-7|TLE3;nc|ENSG00000140332|Q04726-6|TLE3;nc|ENSG00000106829|Q04727-2|TLE4;nc|ENSG00000140332|Q04726-2|TLE3;nc|ENSG00000140332|Q04726-4|TLE3;ENST00000462803.5_1_9:82286241-82340056:+|nuORF;nc|ENSG00000106829|Q04727-4|TLE4;nc|ENSG00000140332|Q04726-3|TLE3;nc|ENSG00000140332|Q04726|TLE3;ENSG00000140332|ENST00000451782|TLE3;ENST00000557815.1_1_15:70346775-70346994:-|nuORF;nc|ENSG00000106829|Q04727-3|TLE4 29.84058131909904 0.1515068451768857 3 {I|L}PD 3 -1 43.729 0.0 0.0 4.4504 0.0 0.0 0.0 654.3954561822874 654.3954561822874 10.030834337684311 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PD 4.4504 + + 24 + 1 1.036 34893.2 1.0 8377 5522 13896 HBL1_DMSO_200M_050219_1,13901 HBL1_DMSO_200M_050219_1,13901,LPDTRAVIV False False LPDGRTLIV 69.23479 492.298510730267 331674984.0 13896.0 ENSG00000106829|ENST00000376552|TLE4;;nc|ENSG00000140332|Q04726-7|TLE3;;nc|ENSG00000140332|Q04726-6|TLE3;;nc|ENSG00000106829|Q04727-2|TLE4;;nc|ENSG00000140332|Q04726-2|TLE3;;nc|ENSG00000140332|Q04726-4|TLE3;;ENST00000462803.5_1_9:82286241-82340056:+|nuORF;;nc|ENSG00000106829|Q04727-4|TLE4;;nc|ENSG00000140332|Q04726-3|TLE3;;nc|ENSG00000140332|Q04726|TLE3;;ENSG00000140332|ENST00000451782|TLE3;;ENST00000557815.1_1_15:70346775-70346994:-|nuORF;;nc|ENSG00000106829|Q04727-3|TLE4 4.706420660018921 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13902 69.236 11.0 3711200.0 25 0 961570.0 42128 VRRLPGGG 8 47 406.24857980309577 810.4826066729916 2 406.2485229372978 MULTI CID FTMS 0 0 0 13896 4822561.0 0.3068925443586959 6 -0.4640884399414062 6 Unmodified _VRRLPGGG_ ENST00000497505.5_1_2:203879615-203880929:+|nuORF 0.0 0.8243325171867699 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.036 39682.9 1.0 8378 5522 13896 HBL1_DMSO_200M_050219_1,13902 HBL1_DMSO_200M_050219_1,13902,VRRLPGGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13903 69.237 12.0 4792600.0 25 0 1115900.0 + 6279 DVANKIGII 9 80 471.78519209111215 941.5558312490244 2 471.7849304080009 MULTI CID FTMS 0 0 0 13896 4224748.0 0.5096179693932331 1 -0.0276336669921875 7 Unmodified _DVANKIGII_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 27.628801355627647 0.1796483985696185 3 {[QN]|[E{I|L}]|[KN]}A{I|L}VDG{I|L}{I|L} 9 5 + 42.858 0.0 0.0 4.5519 4.5519 81.218 0.0 0.0 0.0 3.561603143133496 -1.9094593421900183 -1.9094593421900183 7.958800173440743 0 0.3182503180159344 0.0 0.805462187404089 0.6549471895720984 {[QN]|[E{I|L}]|[KN]}A{I|L}VDG{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}A{I|L}G[DV]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}AV{I|L}DG{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}AVDG{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}A{I|L}[RD]{I|L}{I|L};{[QG]|[NA]}K{I|L}VDG{I|L}{I|L};[DV][R{I|L}][DV]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}AVA[DV]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}AG[DV]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}G{I|L}DG{I|L}{I|L} 4.5519;3.7066;3.4613;3.4566;3.0186;2.7942;2.7707;2.6161;2.6113;2.3661 -;-;-;-;-;-;-;-;-;- 512 1 1.036 45767.7 1.0 8379 5522 13896 HBL1_DMSO_200M_050219_1,13903 HBL1_DMSO_200M_050219_1,13903,DVANKIGII False True DVANKIGII 69.237146 471.784930408001 106877184.0 13896.0 ENST00000471152.1_2_3:161146917-161147007:-|nuORF;;ENSG00000198242|ENST00000422514|RPL23A;;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 4.245709419250488 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13904 69.238 14.0 2563600.0 25 0 371030.0 43624 YAKNNIPII 9 65 523.3039931374598 1044.5934333417194 2 523.3039428591728 MULTI CID FTMS 0 0 0 13896 2429325.75 0.766781552743804 1 -0.0276336669921875 8 Unmodified _YAKNNIPII_ ENSG00000134910|ENST00000392708|STT3A;ENST00000526726.1_1_11:125479363-125482632:+|nuORF;ENST00000531001.1_1_11:125478078-125479612:+|nuORF;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;nc|ENSG00000134910|P46977-2|STT3A 5.230669730166228 0.7320841359114558 3 {I|L} 1 8 11.783 0.0 0.0 1.128 0.0 0.0 913.498262298554 0.0 913.498262298554 0.0 4.793036574208873 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.128 + + 12 + 1 1.036 33457.6 1.0 8380 5522 13896 HBL1_DMSO_200M_050219_1,13904 HBL1_DMSO_200M_050219_1,13904,YAKNNIPII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13905 69.24 35.0 2219000.0 25 0 560990.0 7396 EGIGKIVL 8 73 414.76211459499535 827.5096762567907 2 414.7618896365166 MULTI CID FTMS 0 0 0 13896 2245460.75 0.1846727226342398 6 -0.4640884399414062 9 Unmodified _EGIGKIVL_ ENST00000393262.3_1_12:76741364-76741436:-|nuORF 0.7936320650641473 0.8195151834710337 3 V 1 7 10.181 0.0 0.0 1.2303 0.0 0.0 710.4301988781759 0.0 710.4301988781759 0.0 8.58726705015016 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2303 + + 5 + 1 1.036 65984.3 1.0 8381 5522 13896 HBL1_DMSO_200M_050219_1,13905 HBL1_DMSO_200M_050219_1,13905,EGIGKIVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13906 69.241 21.0 3252400.0 25 0 358820.0 + 35937 SVPESPEFVRV 11 41 623.3275420605378 1244.6405311878757 2 623.3277465701103 MULTI CID FTMS 0 0 0 13896 2059869.375 0.5237185497873085 1 -0.0276336669921875 10 Unmodified _SVPESPEFVRV_ ENSG00000084090|ENST00000337288|STARD7 35.61225514009592 0.279986979807413 3 [VS]PESPE 7 4 66.726 0.0 0.0 5.3611 0.0 0.0 0.0 516.2948702447874 516.2948702447874 36.79251990021157 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.8494850021680094 0.0 + [VS]PESPE 5.3611 + + 31 + 1 1.036 55515.0 1.0 8382 5522 13896 HBL1_DMSO_200M_050219_1,13906 HBL1_DMSO_200M_050219_1,13906,SVPESPEFVRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13907 69.242 16.0 3032500.0 25 0 285240.0 + 37721 AIITGFRNV 9 83 496.2378657400438 990.4611785468876 2 496.2373535037041 MULTI CID FTMS 0 0 0 13896 1839393.625 0.1472274711533128 13 -1.1710891723632812 11 Unmodified _TLQGWQCGV_ nc|ENSG00000156970|O60566-3|BUB1B;ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B 9.347437153973935 0.588369872918737 3 C(Carbamidomethyl (C))V 2 7 14.693 0.0 0.0 1.4834 0.0 0.0 713.3549601404408 0.0 713.3549601404408 0.0 6.787887749990346 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))V 1.4834 - 247 + 1 1.036 40406.7 1.0 8383 5522 13896 HBL1_DMSO_200M_050219_1,13907 HBL1_DMSO_200M_050219_1,13907,TLQGWQCGV False False AIITGFRNV 69.241861 496.237353503704 10067228.0 13896.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B;;nc|ENSG00000156970|O60566-2|BUB1B 0.8878336648146311 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13908 69.243 54.0 315030.0 25 0 38520.0 -1 0 22 986.4825645992212 1970.9505762652425 2 986.4832031130792 MULTI CID FTMS 0 0 0 13896 1497072.125 0.2907353638449637 7 -0.5975265502929688 12 3 V 1 -1 6.9897 0.0 0.0 0.35464 0.0 0.0 1240.5857213841862 628.2762545221311 1868.8619759063167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.35464 - 3 + 1 1.036 23163.4 1.0 8384 5522 13896 HBL1_DMSO_200M_050219_1,13908 HBL1_DMSO_200M_050219_1,13908, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13909 69.245 57.0 1614000.0 25 0 248410.0 36535 TAIDTLSSYGP 11 104 375.5192865794357 1123.536030338507 3 375.5193054080009 MULTI CID FTMS 0 0 0 13896 1465273.75 0.2595322420078339 6 -0.4640884399414062 13 Unmodified _TAIDTLSSYGP_ ENST00000273047.8_1_3:19988696-19992457:+|nuORF 15.248480904072842 0.7179608125786238 3 {[RE]|[WV]}D{I|L}T{I|L} 6 9 41.075 0.0 0.0 3.6559 0.0 0.0 0.0 393.1014803522094 393.1014803522094 20.13296575220324 0.0 0.0 0.0 0 0.6109243748081782 0.0 0.805462187404089 0.0 {[RE]|[WV]}D{I|L}T{I|L} 3.6559 - 340 + 1 1.036 85903.6 1.0 8385 5522 13896 HBL1_DMSO_200M_050219_1,13909 HBL1_DMSO_200M_050219_1,13909,TAIDTLSSYGP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13910 69.246 44.0 1340100.0 25 0 148920.0 38786 TVDQWEID 8 78 335.82371844756244 1004.4493259428872 3 335.8235046267509 MULTI CID FTMS 0 0 0 13896 1450296.25 0.413182339863652 7 -0.5975265502929688 14 Unmodified _TVDQWEID_ ENSG00000111816|ENST00000606080|FRK;nc|ENSG00000111816|P42685-2|FRK 9.38312468134398 0.7673771031149565 3 TVT 3 6 30.445 0.0 0.0 3.031 0.0 0.0 0.0 700.2639923597914 700.2639923597914 27.34636880228201 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 TVT 3.031 - 7 + 1 1.036 53132.3 1.0 8386 5522 13896 HBL1_DMSO_200M_050219_1,13910 HBL1_DMSO_200M_050219_1,13910,TVDQWEID False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13911 69.247 39.0 3421600.0 25 0 381740.0 12329 GSLLRVWVS 9 112 508.79829943330793 1015.582045933416 2 508.7967712283134 MULTI CID FTMS 0 0 0 13896 1171652.625 0.306420817895783 -9 0.3470001220703125 15 Unmodified _GSLLRVWVS_ ENST00000481476.1_1_9:132501692-132501800:-|nuORF 4.3292370932331545 0.7635526921153418 3 {I|L} 1 8 10.969 0.0 0.0 1.0801 0.0 0.0 884.4868291138831 0.0 884.4868291138831 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0801 + + 25 + 1 1.036 105547.3 1.0 8387 5522 13896 HBL1_DMSO_200M_050219_1,13911 HBL1_DMSO_200M_050219_1,13911,GSLLRVWVS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13912 69.248 33.0 2393600.0 25 0 269350.0 + 10535 FVDPNGKISL 10 95 545.300390678219 1088.5862284232378 2 545.3007079958916 MULTI CID FTMS 0 0 0 13896 935427.0625 0.0535714198787398 -4 0.1959609985351562 16 Unmodified _FVDPNGKISL_ ENSG00000107862|ENST00000369983|GBF1;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1 40.23920728925047 0.1550410903091231 3 [{M(Oxidation (M))|F}V]DPNG 6 4 44.474 0.0 0.0 4.0855 0.0 0.0 0.0 456.28379236392817 456.28379236392817 12.078796174025896 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.4247425010840047 + [{M(Oxidation (M))|F}V]DPNG 4.0855 + + 603 + 1 1.036 68766.0 1.0 8388 5522 13896 HBL1_DMSO_200M_050219_1,13912 HBL1_DMSO_200M_050219_1,13912,FVDPNGKISL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13913 69.249 23.0 2029900.0 25 0 171020.0 + 25246 MVPEDVPRL 9 69 528.2793390778404 1054.5441252224807 2 528.2806274294853 MULTI CID FTMS 0 0 0 13896 1143635.375 0.4671381098729094 -4 0.1959609985351562 17 Unmodified _MVPEDVPRL_ ENSG00000272333|ENST00000420124|KMT2B 22.736283301280096 0.2418982879461534 3 {[ET]|[MV]}PEDV[RP]{I|L} 9 0 + 31.955 0.0 0.0 3.0302 3.0302 82.579 0.0 0.0 0.0 17.350779384990215 3.538498075704592 3.538498075704592 31.95487315475209 0 0.0 0.0 0.0 0.3494850021680094 + + {[ET]|[MV]}PEDV[RP]{I|L} 3.0302 + + 73 + 1 1.036 47887.8 1.0 8389 5522 13896 HBL1_DMSO_200M_050219_1,13913 HBL1_DMSO_200M_050219_1,13913,MVPEDVPRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13914 69.251 49.0 445510.0 25 0 25549.0 + 15587 IPYPLSENNQV 11 48 637.3245343686755 1272.6345158041509 2 637.3252441287041 MULTI CID FTMS 0 0 0 13896 949730.6875 0.078681921770146 20 -1.7182464599609375 18 Unmodified _IPYPLSENNQV_ ENSG00000104549|ENST00000265896|SQLE 32.78568957990786 0.3235288296534633 3 [{I|L}P]YP{I|L}SENNQV 11 0 + 72.255 0.0 0.0 5.6776 5.6776 83.286 0.0 0.0 0.0 6.020599913279625 8.604710706454412 6.020599913279625 6.020599913279625 0 0.1237125054200235 1.5228787452803376 0.3807196863200844 0.0 + + [{I|L}P]YP{I|L}SENNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENNQV;[{I|L}P]YP{I|L}SEGGNQV;[{I|L}P]YP{I|L}SENGGQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SEGGNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENGGQV;[{I|L}P]YP{I|L}SEGGGGQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SEGGGGQV 5.6776;5.2045;4.9603;4.9603;4.4872;4.4872;4.2454;3.7723 +;-;-;-;-;-;-;- + 144 1 1.036 24046.3 1.0 8390 5522 13896 HBL1_DMSO_200M_050219_1,13914 HBL1_DMSO_200M_050219_1,13914,IPYPLSENNQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13915 69.252 43.0 1864000.0 25 0 130820.0 + 38760 TVCGCGHTGSV 11 105 510.7148672810575 1019.415181628915 2 510.7148010134697 MULTI CID FTMS 0 0 0 13896 934023.875 0.1073686552235757 15 -1.3123245239257812 19 Unmodified _TVCGCGHTGSV_ REV__nc|ENSG00000106948|Q7Z591-6|AKNA 13.042465956692816 0.7638483625850725 3 CTV 3 -1 16.242 0.0 0.0 1.5932 0.0 0.0 698.2824434470775 0.0 698.2824434470775 0.0 0.3511320169734961 0.0 0.0 0 0.0 0.0 0.5 0.0 CTV 1.5932 - 184 + 1 1.036 66261.4 1.0 8391 5522 13896 HBL1_DMSO_200M_050219_1,13915 HBL1_DMSO_200M_050219_1,13915,TVCGCGHTGSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13916 69.254 64.0 1254800.0 25 0 118520.0 + 21913 LPPHIIRL 8 85 479.8137764865654 957.6130000399309 2 479.8139526247978 MULTI CID FTMS 0 0 0 13896 929385.75 0.379942944318843 1 -0.0276336669921875 20 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 30.63653989081413 0.3996269429323407 3 {I|L}PPH{I|L}[R{I|L}]{I|L} 8 0 + 72.384 0.0 0.0 7.5587 7.5587 96.853 0.0 0.0 0.0 56.89896278884483 10.177287669604311 10.177287669604311 72.38351285388511 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPH{I|L}[R{I|L}]{I|L} 7.5587 + + 68 + 1 1.036 67871.6 1.0 8392 5522 13896 HBL1_DMSO_200M_050219_1,13916 HBL1_DMSO_200M_050219_1,13916,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13918 69.258 103.0 1099200.0 25 0 199470.0 + 44924 YPPSMEAVV 9 60 992.4744873444312 991.4672108778312 1 992.4733154177666 MULTI CID FTMS 0 0 0 13917 987321.875 0.4501901798201582 37 -3.0870819091796875 1 Unmodified _YPPSMEAVV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 85.35673624503755 0.0162188719545379 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]MEAVV 9 0 + 70.894 0.0 0.0 7.1505 7.1505 88.526 0.0 0.0 0.0 16.676376130647213 20.7294590079772 16.676376130647213 6.720449851406514 0 0.3494850021680094 2.0 1.6307196863200843 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]MEAVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WE]EAVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]MT[TP]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WE]T[TP]V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ATM[PS]{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AT[WE]{[QN]|[E{I|L}]|[KN]} 7.1505;6.4726;4.4255;3.7477;1.3953;0.71743 +;-;-;-;-;- + 582 1 1.036 78586.0 1.0 8393 5523 13917 HBL1_DMSO_200M_050219_1,13918 HBL1_DMSO_200M_050219_1,13918,YPPSMEAVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13919 69.259 71.0 1089000.0 25 0 71296.0 42358 VTDETDRGV 9 119 331.160789756768 990.460539870504 3 331.1604186892509 MULTI CID FTMS 0 0 0 13917 1159062.375 0.1575570396475914 28 -2.305610656738281 2 Unmodified _VTDETDRGV_ ENST00000472067.1_1_7:143000848-143002161:+|nuORF 7.910154910731844 0.6385446671287552 3 TVK 3 8 18.5 0.0 0.0 1.8678 0.0 0.0 134.057274206685 525.1684664361936 659.2257406428787 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8807196863200843 TVK 1.8678 - 107 + 1 1.036 68306.2 1.0 8394 5523 13917 HBL1_DMSO_200M_050219_1,13919 HBL1_DMSO_200M_050219_1,13919,VTDETDRGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13920 69.261 62.0 706880.0 25 0 46836.0 + 13907 HVVEILVET 9 73 519.79495259044 1037.5753522476798 2 519.7957031130791 MULTI CID FTMS 0 0 0 13917 757297.1875 0.0530772133343239 44 -3.864814758300781 3 Unmodified _HVVEILVET_ ENSG00000170779|ENST00000336219|CDCA4 42.09456458481378 0.0639583784996157 3 [HV]VE{I|L}{I|L} 6 3 31.604 0.0 0.0 3.0459 0.0 0.0 0.0 344.14471138589914 344.14471138589914 14.371987629411294 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + [HV]VE{I|L}{I|L} 3.0459 + + 102 1 1.036 39210.1 1.0 8395 5523 13917 HBL1_DMSO_200M_050219_1,13920 HBL1_DMSO_200M_050219_1,13920,HVVEILVET True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13921 69.266 290.0 460470.0 25 0 33867.0 + -1 SIDAIRKCLM 10 159 583.3047655689543 1164.5949782047085 2 583.3051635622978 MULTI CID FTMS 0 0 0 13917 633509.625 0.1442526715086403 29 -2.3584136962890625 4 Oxidation (M) _SIDAIRKCLM(Oxidation (M))_ REV__ENSG00000100902|ENST00000261479|PSMA6;REV__ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;REV__ENST00000554843.5_1_14:35761682-35780127:+|nuORF;REV__nc|ENSG00000100902|P60900-2|PSMA6;REV__nc|ENSG00000100902|P60900-3|PSMA6 18.1463463914782 0.5430639438673815 3 [{I|L}A]DSTM{I|L}{I|L} 8 -1 41.59 0.0 0.0 3.5712 0.0 0.0 0.0 317.1341957327019 317.1341957327019 -1.0169068226654687 0.0 -1.0169068226654687 0.0 0 0.0 0.721246399047171 2.548455006504028 0.0 [{I|L}A]DSTM{I|L}{I|L} 3.5712 - 2919 1 1.036 103491.0 1.0 8396 5523 13917 HBL1_DMSO_200M_050219_1,13921 HBL1_DMSO_200M_050219_1,13921,SIDAIRKCLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13922 69.272 323.0 312180.0 25 0 55695.0 + 38876 TVKKGFRRR 9 133 574.3620043938002 0 574.3620483279228 PEAK CID FTMS 0 0 0 13917 495795.53125 0.3260273459709523 1 -0.142120361328125 5 Unmodified _TVKKGFRRR_ REV__ENSG00000137857|ENST00000389037|DUOX1;REV__ENST00000557893.5_1_15:45440187-45444854:+|nuORF;REV__ENST00000561220.6_1_15:45434150-45457096:+|nuORF;REV__nc|ENSG00000137857|Q9NRD9-2|DUOX1 2.059750862983233 0.3444685223463734 3 PY 2 -1 7.9588 0.0 0.0 0.69406 0.0 0.0 115.18596339815764 768.3842479705721 883.5702113687298 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PY 0.69406 - 44 + 1 1.036 81392.3 1.0 8397 5523 13917 HBL1_DMSO_200M_050219_1,13922 HBL1_DMSO_200M_050219_1,13922,TVKKGFRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13923 69.275 158.0 516660.0 25 0 104070.0 + 21038 LPAARKRV 8 103 455.8009072210231 909.5872615088462 2 455.8008300662041 MULTI CID FTMS 0 0 0 13917 461108.15625 0.2893075618771406 6 -0.5698928833007812 6 Unmodified _LPAARKRV_ REV__ENST00000317704.8_1_1:77747869-77779575:+|nuORF 6.354104778181461 0.7857632046190106 3 [{I|L}P]N{I|L}{I|L} 5 -1 20.299 0.0 0.0 2.2317 0.0 0.0 0.0 356.21608165949 356.21608165949 8.309710622901218 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [{I|L}P]N{I|L}{I|L} 2.2317 - 110 1 1.036 67812.9 1.0 8398 5523 13917 HBL1_DMSO_200M_050219_1,13923 HBL1_DMSO_200M_050219_1,13923,LPAARKRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13924 69.282 372.0 367150.0 25 0 13589.0 -1 0 133 873.4185370560829 1744.8225211789656 2 874.4185058474541 MULTI CID FTMS 0 0 0 13917 406187.65625 0.2690003183796973 7 -0.6016921997070312 7 3 [NP]{I|L}N[QA]PQAEN{I|L}DP[QP] 16 -1 + 69.133 0.0 0.0 3.9622 3.9622 71.535 0.0 0.0 0.0 2.4041782993998595 7.659167939666318 2.4041782993998595 1.4612803567823818 0 0.0 1.0969100130080565 0.7302046884880937 0.6861818737241735 [NP]{I|L}N[QA]PQAEN{I|L}DP[QP];[NP]{I|L}NEAT{[HG]|PP}EN{I|L}DP[QP];[MN]P[HV]RQAEN{I|L}DP[QP];[NP]{I|L}NCVV{[HG]|PP}EN{I|L}DP[QP];[NP]M[HV]RQAEN{I|L}DP[QP];[NP]{I|L}NEAT[WH]N{I|L}DP[QP];[NP]{I|L}N[QA]PQAEGG{I|L}DP[QP];[NP]{I|L}N[QA]P[AG]AEN{I|L}DP[QP];[NP]{I|L}GG[QA]PQAEN{I|L}DP[QP];[NP]{I|L}GGEAT{[HG]|PP}EN{I|L}DP[QP] 3.9622;3.8784;3.8244;3.5948;3.506;3.4939;3.4456;3.4456;3.4456;3.3618 -;-;-;-;-;-;-;-;-;- 8404 1 1.036 93855.1 1.0 8399 5523 13917 HBL1_DMSO_200M_050219_1,13924 HBL1_DMSO_200M_050219_1,13924, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13925 69.289 371.0 801480.0 25 0 118140.0 + 32002 RVIDLRAEL 9 205 542.8283574761181 1083.642162019036 2 542.8282958865166 MULTI CID FTMS 0 0 0 13917 356187.125 0.2693165986057523 -3 0.123016357421875 8 Unmodified _RVIDLRAEL_ ENSG00000130254|ENST00000252542|SAFB2;ENSG00000160633|ENST00000588852|SAFB;ENST00000586934.5_1_19:5623180-5651054:+|nuORF;nc|ENSG00000130254|Q14151-2|SAFB2;nc|ENSG00000160633|Q15424-2|SAFB;nc|ENSG00000160633|Q15424-4|SAFB;nc|ENSG00000160633|Q15424|SAFB 42.312485326615175 0.0627620958981271 3 RV{I|L}D{I|L}E{I|L}N{I|L} 9 3 + 62.612 0.0 0.0 5.7779 5.7779 84.413 0.0 0.0 0.0 8.54278551929692 6.73415899863631 6.73415899863631 6.73415899863631 0 1.2068492671975348 0.3872161432802645 0.2614393726401688 0.6747425010840047 RV{I|L}D{I|L}E{I|L}N{I|L};RV{I|L}D{I|L}E{I|L}QV;{I|L}[RV]D{I|L}E{I|L}N{I|L};{I|L}[RV]D{I|L}E{I|L}QV;[VG]AQK{I|L}E{I|L}N{I|L};RV{I|L}D{I|L}E{I|L}GG{I|L};[VG]AQK{I|L}E{I|L}QV;RV{I|L}D{I|L}E{I|L}[AG]V;[{I|L}A]{I|L}W{I|L}R{[ES]|[DT]|[{I|L}C]}P;{I|L}[RV]D{I|L}E{I|L}GG{I|L} 5.7779;5.1565;4.9896;4.3682;4.3632;4.3055;3.7417;3.6841;3.5691;3.5172 -;-;-;-;-;-;-;-;-;- 1281 + 1 1.036 228607.2 1.0 8400 5523 13917 HBL1_DMSO_200M_050219_1,13925 HBL1_DMSO_200M_050219_1,13925,RVIDLRAEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13926 69.295 371.0 459290.0 25 0 39234.0 + 30882 RIPEEILGKV 10 158 577.3504943437682 1152.6864357543363 2 577.3515502810478 MULTI CID FTMS 0 0 0 13917 337386.53125 0.835080166038831 2 -0.2398757934570312 9 Unmodified _RIPEEILGKV_ ENSG00000126934|ENST00000262948|MAP2K2;ENST00000597008.5_1_19:4100806-4102439:-|nuORF 46.0223103267499 0.103496714999793 3 [R{I|L}][EP]E{I|L}{I|L}GKV 10 0 + 63.234 0.0 0.0 5.4858 5.4858 83.429 0.0 0.0 0.0 6.706962271689754 46.53000186740636 6.706962271689754 6.717042969019289 0 1.989651828710444 0.744727494896694 0.3494850021680094 0.0 + + [R{I|L}][EP]E{I|L}{I|L}GKV;[{I|L}V][WP]E{I|L}{I|L}GKV;[KG]{I|L}YY{I|L}{I|L}GKV;[{I|L}P]{[RE]|[WV]}E{I|L}{I|L}GKV;{[TV]|[{I|L}S]}[QA][QP]{I|L}{I|L}GKV;[KG][DV][QP]{I|L}{I|L}GKV;[VG]A[TA][QP]{I|L}{I|L}GKV;[VP][W{I|L}]E{I|L}{I|L}GKV;[PS][KS][QP]{I|L}{I|L}GKV;{[QV]|[N{I|L}]|[RA]|[KV]}[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}GKV 5.4858;4.9031;4.8959;4.7971;4.6931;4.2536;4.0392;4.0336;3.8108;3.7531 +;-;-;-;-;-;-;-;-;- + 1328 1 1.036 127630.1 1.0 8401 5523 13917 HBL1_DMSO_200M_050219_1,13926 HBL1_DMSO_200M_050219_1,13926,RIPEEILGKV True True RIPEEILGKV 69.295319 577.351550281048 12681731.0 13917.0 ENST00000597008.5_1_19:4100806-4102439:-|nuORF;;ENSG00000126934|ENST00000262948|MAP2K2 5.101663430531819 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13927 69.303 423.0 193840.0 25 0 11888.0 + -1 MNWLWCMKTMF 11 105 782.336954371845 1562.6593558104898 2 782.3370239138603 MULTI CID FTMS 0 0 0 13917 285000.5625 1.0 0 0.0 10 Carbamidomethyl (C),Oxidation (M) _MNWLWC(Carbamidomethyl (C))MKTM(Oxidation (M))F_ REV__ENST00000409618.5_1_2:220088867-220088918:-|nuORF 2.735195868890462 0.8622431031272658 3 QTY 3 -1 29.737 0.0 0.0 1.903 0.0 0.0 1152.4810452863612 0.0 1152.4810452863612 0.0 10.779550148593486 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 QTY 1.903 - 1005 + 1 1.036 59743.3 1.0 8402 5523 13917 HBL1_DMSO_200M_050219_1,13927 HBL1_DMSO_200M_050219_1,13927,MNWLWCMKTMF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13928 69.311 445.0 448660.0 25 0 131070.0 + 45494 KAEEVFYAV 9 96 1055.5401764691596 1054.5329000025597 1 1055.668627917767 MULTI CID FTMS 0 0 0 -1 0 11 Unmodified _YTPAATGLYV_ nc|ENSG00000118515|O00141|SGK1;ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134494408-134494507:-|nuORF;ENST00000490149.6_1_6:134494408-134495238:-|nuORF;ENST00000532856.5_1_6:134494408-134495951:-|nuORF;nc|ENSG00000118515|O00141-4|SGK1;ENST00000532021.5_1_6:134494408-134498975:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-5|SGK1 13.90604991867851 0.6142120002215601 3 V{M(Oxidation (M))|F}YAV 5 8 31.454 0.0 0.0 2.9827 0.0 0.0 457.2160816876969 0.0 457.2160816876969 0.0 25.130675218337 0.0 0.0 0 0.0 0.0 0.0 0.0 V{M(Oxidation (M))|F}YAV 2.9827 - 249 1 1.036 146944.8 1.0 8403 5523 13917 HBL1_DMSO_200M_050219_1,13928 HBL1_DMSO_200M_050219_1,13928,YTPAATGLYV False False KAEEVFYAV 69.310815 1055.66862791777 1875958.25 13917.0 nc|ENSG00000118515|O00141|SGK1;;ENSG00000118515|ENST00000367858|SGK1;;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;;ENST00000474427.6_1_6:134494408-134494507:-|nuORF;;ENST00000490149.6_1_6:134494408-134495238:-|nuORF;;ENST00000532856.5_1_6:134494408-134495951:-|nuORF;;nc|ENSG00000118515|O00141-4|SGK1;;ENST00000532021.5_1_6:134494408-134498975:-|nuORF;;nc|ENSG00000118515|O00141-3|SGK1;;nc|ENSG00000118515|O00141-5|SGK1 -0.4827967981497447 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13929 69.318 410.0 131440.0 25 0 9188.7 44737 YPKFNFVGKLL 11 111 663.3825124521845 0 663.3820678591728 PEAK CID FTMS 0 0 0 13917 227264.84375 0.2791577800974578 16 -1.480712890625 12 Unmodified _YPKFNFVGKLL_ ENSG00000112232|ENST00000281156|KHDRBS2 3.2813086475875832 0.4761840153648598 3 {I|L} 1 10 3.9794 0.0 0.0 0.30039 0.0 0.0 982.558773828394 226.08364282779533 1208.6424166561894 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.30039 + + 56 + 1 1.036 45684.9 1.0 8404 5523 13917 HBL1_DMSO_200M_050219_1,13929 HBL1_DMSO_200M_050219_1,13929,YPKFNFVGKLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13930 69.328 487.0 469520.0 25 0 53813.0 + 34427 SLVTNMAIT 9 218 475.2530741705133 0 475.2517883181572 PEAK CID FTMS 0 0 0 13917 243207.625 0.1287166886711761 28 -2.305610656738281 13 Unmodified _SLVTNMAIT_ REV__ENST00000507678.5_1_4:177241188-177241371:+|nuORF;REV__ENST00000513139.1_1_4:177241188-177248429:+|nuORF 71.92227651296345 0.0171259190214613 3 TN{I|L}CT 5 -1 38.822 0.0 0.0 4.093 0.0 0.0 299.18008525333295 114.05667291812732 413.2367581714603 0.0 0.0 0.0 0.0 0 1.610924374808178 0.0 1.0941876774005248 0.5 TN{I|L}CT 4.093 - 1006 + 1 1.036 172072.6 1.0 8405 5523 13917 HBL1_DMSO_200M_050219_1,13930 HBL1_DMSO_200M_050219_1,13930,SLVTNMAIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13931 69.336 464.0 299140.0 25 0 22363.0 + + 24116 LYLETRSEF 9 150 579.2982546368872 0 579.2999755740166 PEAK CID FTMS 0 0 0 13917 233406.09375 1.0 0 0.0 14 Carbamidomethyl (C) _LYLEFLC(Carbamidomethyl (C))SL_ ENST00000353107.7_1_8:101162841-101162934:+|nuORF 42.09456458481378 0.053291022336892 3 Y{I|L}ET 4 -1 29.483 0.0 0.0 2.5491 0.0 0.0 113.08764674158996 534.2367037408811 647.3243504824711 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.6307196863200843 0.0 Y{I|L}ET 2.5491 - 133 + 1 1.036 107240.1 1.0 8406 5523 13917 HBL1_DMSO_200M_050219_1,13931 HBL1_DMSO_200M_050219_1,13931,LYLEFLCSL False False LYLETRSEF 69.336146 579.299975574017 1670925.0 13917.0 ENST00000353107.7_1_8:101162841-101162934:+|nuORF 2.8737199952205024 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13932 69.345 477.0 108940.0 25 0 7227.6 -1 VLMPTRFEWNA 11 98 690.3413572798406 1378.6681616264812 2 690.3415405154228 MULTI CID FTMS 0 0 0 13917 254344.703125 1.0 0 0.0 15 Oxidation (M) _VLM(Oxidation (M))PTRFEWNA_ CON__P28800 6.2057823575117 0.8458686499021061 3 {[QG]|[NA]}G{M(Oxidation (M))|F} 4 -1 21.242 0.0 0.0 1.5408 0.0 0.0 0.0 986.473770107203 986.473770107203 9.459472882715954 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 {[QG]|[NA]}G{M(Oxidation (M))|F} 1.5408 - 195 1 1.036 43920.5 1.0 8407 5523 13917 HBL1_DMSO_200M_050219_1,13932 HBL1_DMSO_200M_050219_1,13932,VLMPTRFEWNA False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 13933 69.353 480.0 216860.0 25 0 9610.6 + 6267 DTTKTCGNLNL 11 147 590.2898727825948 1178.5651926319897 2 590.2906371951103 MULTI CID FTMS 0 0 0 13917 207715.703125 0.0557127587726712 16 -1.480712890625 16 Unmodified _DTTKTCGNLNL_ REV__ENSG00000108306|ENST00000264658|FBXL20;REV__nc|ENSG00000108306|Q96IG2-2|FBXL20 12.240655878213236 0.7805268987462184 3 [{M(Oxidation (M))|F}V]{I|L}Y 4 -1 16.488 0.0 0.0 1.399 0.0 0.0 0.0 653.2628604388832 653.2628604388832 4.014093602655468 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 0.0 [{M(Oxidation (M))|F}V]{I|L}Y 1.399 - 549 1 1.036 81739.6 1.0 8408 5523 13917 HBL1_DMSO_200M_050219_1,13933 HBL1_DMSO_200M_050219_1,13933,DTTKTCGNLNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13934 69.364 580.0 180820.0 25 0 15676.0 + -1 FYPGQAPSL 9 100 979.4864728335726 1956.9583927339447 2 979.4857055544852 MULTI CID FTMS 0 0 0 13917 224947.8125 0.0535303069080943 9 -0.7983474731445312 17 ENSG00000074582|ENST00000359273|BCS1L;ENST00000460579.5_1_2:219527197-219528106:+|nuORF 3 [QP]GAY{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 7 -1 23.549 0.0 0.0 1.2033 0.0 0.0 0.0 1130.588736035673 1130.588736035673 7.301842785659165 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 [QP]GAY{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 1.2033 - 4988 1 1.036 74142.4 1.0 8409 5523 13917 HBL1_DMSO_200M_050219_1,13934 HBL1_DMSO_200M_050219_1,13934, False False FYPGQAPSL 69.364458 979.485705554485 0.0 13917.0 ENSG00000074582|ENST00000359273|BCS1L;;ENST00000460579.5_1_2:219527197-219528106:+|nuORF 0.2476129333178202 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13935 69.369 250.0 245030.0 25 0 17705.0 + 14986 ILRCKMNKI 9 108 559.8284855357309 1117.6424181382615 2 560.3291503787041 MULTI CID FTMS 0 0 0 13917 216710.296875 0.5369195149093307 2 -0.2398757934570312 18 Unmodified _ILRCKMNKI_ REV__chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;REV__ENSG00000119969|ENST00000348459|HELLS;REV__nc|ENSG00000119969|Q9NRZ9-2|HELLS;REV__nc|ENSG00000119969|Q9NRZ9-3|HELLS;REV__nc|ENSG00000119969|Q9NRZ9-4|HELLS 12.531546534597751 0.4974689918368763 3 {I|L} 1 -1 11.783 0.0 0.0 1.0542 0.0 0.0 986.5472318363072 0.0 986.5472318363072 0.0 -1.6606136209119704 -1.6606136209119704 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0542 + + 141 + 1 1.036 51644.6 1.0 8410 5523 13917 HBL1_DMSO_200M_050219_1,13935 HBL1_DMSO_200M_050219_1,13935,ILRCKMNKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13936 69.382 771.0 595350.0 25 0 58679.0 7134 EENETEAVT 9 347 341.1481865772767 1020.42273033203 3 341.1477844119072 MULTI CID FTMS 0 0 0 13917 189084.296875 0.1745555577737102 23 -1.9916229248046875 19 Unmodified _EENETEAVT_ ENSG00000006453|ENST00000005260|BAIAP2L1 10.150570793230772 0.5619192000662246 3 {M(Oxidation (M))|F} 1 9 11.259 0.0 0.0 1.1034 0.0 0.0 855.3430164421849 0.0 855.3430164421849 0.0 0.4216044285001796 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1034 - 112 + 1 1.036 356940.6 1.0 8411 5523 13917 HBL1_DMSO_200M_050219_1,13936 HBL1_DMSO_200M_050219_1,13936,EENETEAVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13937 69.396 759.0 612270.0 25 0 39688.0 + 24816 MPKIKMPKI 9 299 362.5571424720684 1084.6495980164052 3 362.5571472048759 MULTI CID FTMS 0 0 0 13917 197655.8125 0.4670898818064285 -5 0.2235946655273437 20 Unmodified _MPKIKMPKI_ ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK 37.07464296494664 0.0915153923251136 3 MPK{I|L}KM{I|L}TG 9 3 59.616 0.0 0.0 5.4963 0.0 0.0 0.0 82.06699548892811 82.06699548892811 31.1515972763123 0.0 0.0 0.0 0 1.174742501084005 0.3767507096020995 1.6549471895720984 0.2302046884880938 MPK{I|L}KM{I|L}TG 5.4963 - 1538 + 1 1.036 364081.9 1.0 8412 5523 13917 HBL1_DMSO_200M_050219_1,13937 HBL1_DMSO_200M_050219_1,13937,MPKIKMPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13939 69.4 6.1 7632200.0 25 0 1564200.0 + + 8830 KQYGNEVFL 9 70 549.2852363066577 1096.5559196801153 2 549.2856323122978 MULTI CID FTMS 0 0 0 13938 6533983.5 0.5977555566980902 1 -0.0977554321289062 1 Unmodified _EYQIWVFI_ ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8 28.486842064014134 0.4448922141344407 3 E[KQ]V{M(Oxidation (M))|F}{I|L} 6 -1 45.45 0.0 0.0 4.1448 0.0 0.0 334.1303883283219 0.0 334.1303883283219 0.0 38.460696996448576 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.8494850021680094 E[KQ]V{M(Oxidation (M))|F}{I|L} 4.1448 - 41 1 1.053 44681.9 1.0 8413 5524 13938 HBL1_DMSO_200M_050219_1,13939 HBL1_DMSO_200M_050219_1,13939,EYQIWVFI False False KQYGNEVFL 69.399835 549.285632312298 224523760.0 13938.0 ENST00000484403.5_1_21:30439206-30445917:-|nuORF;;nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 5.954818566640218 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13940 69.401 16.0 1867900.0 25 0 289320.0 + 4473 DAYALNHTLSV 11 62 602.3037908596431 1202.593028786086 2 602.3042480349541 MULTI CID FTMS 0 0 0 13938 2205043.0 0.1620227778274572 3 -0.2512283325195312 2 Unmodified _DAYALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 32.037481411007896 0.3399527776090619 3 {[DA]|[EG]}YA 4 7 35.406 0.0 0.0 2.9441 0.0 0.0 0.0 779.4046797472766 779.4046797472766 22.641865279118782 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}YA 2.9441 + + 57 1 1.053 26394.9 1.0 8414 5524 13938 HBL1_DMSO_200M_050219_1,13940 HBL1_DMSO_200M_050219_1,13940,DAYALNHTLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13941 69.402 10.0 5094100.0 25 0 453690.0 + 22842 LRSPLCVL 8 62 450.76995447169656 899.5253560101931 2 450.7703124880791 MULTI CID FTMS 0 0 0 13938 4088896.25 0.6612208088832556 -1 0.142120361328125 3 Unmodified _LRSPLCVL_ ENST00000423902.6_1_8:61591532-61591613:+|nuORF 11.640296217721598 0.738950129755968 3 CV[HA]K{I|L} 6 7 20.736 0.0 0.0 2.3052 0.0 0.0 230.1615175427857 0.0 230.1615175427857 0.0 8.42863739093026 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 CV[HA]K{I|L} 2.3052 - 46 + 1 1.053 46738.9 1.0 8415 5524 13938 HBL1_DMSO_200M_050219_1,13941 HBL1_DMSO_200M_050219_1,13941,LRSPLCVL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13942 69.403 24.0 1679100.0 25 0 231060.0 28732 PVVFPDAVR 9 75 500.2833317178364 998.5521105024728 2 500.2830688357353 MULTI CID FTMS 0 0 0 13938 2105001.0 0.4219256940098105 3 -0.2512283325195312 4 Unmodified _PVVFPDAVR_ ENST00000524739.1_1_11:134129171-134129964:+|nuORF;ENST00000527082.5_1_11:134129171-134129738:+|nuORF 2.059750862983233 0.8427793054688888 3 N 1 9 0.27759 0.0 0.0 0.027799 0.0 0.0 716.3840634827446 165.10405908756096 881.4881225703056 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.027799 - 3 + 1 1.053 39065.7 1.0 8416 5524 13938 HBL1_DMSO_200M_050219_1,13942 HBL1_DMSO_200M_050219_1,13942,PVVFPDAVR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13943 69.405 26.0 1365200.0 25 0 91161.0 3306 AYLAPEVLR 9 75 516.2968084034844 1030.5790638737687 2 516.2961303591728 MULTI CID FTMS 0 0 0 13938 1907858.0 0.4266346741385469 -2 0.1697540283203125 5 Unmodified _AYLAPEVLR_ ENSG00000115825|ENST00000234179|PRKD3;ENSG00000184304|ENST00000331968|PRKD1 5.230669730166228 0.7320841359114558 3 {I|L} 1 8 11.42 0.0 0.0 1.1081 0.0 0.0 899.4841674888063 0.0 899.4841674888063 0.0 1.041379712135413 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1081 + + 22 + 1 1.053 32304.0 1.0 8417 5524 13938 HBL1_DMSO_200M_050219_1,13943 HBL1_DMSO_200M_050219_1,13943,AYLAPEVLR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13944 69.407 147.0 383630.0 25 0 50556.0 + 17803 KQLDAENLEL 10 92 586.8113669884601 1171.6081810437202 2 586.8116332888603 MULTI CID FTMS 0 0 0 13938 487719.84375 1.0 0 0.0 6 Unmodified _KQLDAENLEL_ ENSG00000015133|ENST00000389857|CCDC88C 27.22323531849824 0.3570408936368626 3 {[QN]|[E{I|L}]|[KN]}NKAEN{I|L}E{I|L} 10 3 + 68.079 0.0 0.0 5.8107 5.8107 81.205 0.0 0.0 0.0 3.676421976015291 10.012262311882765 3.676421976015291 3.676421976015291 0 0.5484550065040282 0.8239087409443188 0.2215141619232908 0.8494850021680094 {[QN]|[E{I|L}]|[KN]}NKAEN{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKAEN{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EKAEN{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}GGKAEN{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NKAEGG{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKAEGG{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]KAEN{I|L}E{I|L};[Q{I|L}]KDAEN{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EKAEGG{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}V[DV]EN{I|L}E{I|L} 5.8107;5.4969;5.3408;5.0285;5.0285;4.7147;4.7147;4.6612;4.5586;4.2779 -;-;-;-;-;-;-;-;-;- 610 1 1.053 48170.4 1.0 8418 5524 13938 HBL1_DMSO_200M_050219_1,13944 HBL1_DMSO_200M_050219_1,13944,KQLDAENLEL False True KQLDAENLEL 69.407491 586.81163328886 9480640.0 13938.0 ENSG00000015133|ENST00000389857|CCDC88C 5.35136620203654 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13945 69.411 172.0 589680.0 25 0 165880.0 -1 0 72 930.4432755710624 0 930.4426757693292 PEAK CID FTMS 0 0 0 13938 358788.84375 0.6865252083539877 -2 0.1697540283203125 7 3 W{I|L}CS{I|L}D 6 -1 29.201 0.0 0.0 1.5709 0.0 0.0 929.4387839528684 209.05665002994377 1138.4954339828123 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1989700043360187 0.0 W{I|L}CS{I|L}D 1.5709 - 526 + 1 1.053 71633.1 1.0 8419 5524 13938 HBL1_DMSO_200M_050219_1,13945 HBL1_DMSO_200M_050219_1,13945, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13946 69.422 635.0 780400.0 25 0 83484.0 + -1 FPFYGKPMRI 10 199 424.5583784215215 1270.6533058647644 3 424.5579101443291 MULTI CID FTMS 0 0 0 13938 337752.03125 0.2536012902990863 38 -3.2201080322265625 8 Oxidation (M) _FPFYGKPM(Oxidation (M))RI_ ENSG00000125870|ENST00000246071|SNRPB2 19.62595529434964 0.5182375435722777 3 {I|L}KGY{M(Oxidation (M))|F}PE 7 -1 47.048 0.0 0.0 3.7027 0.0 0.0 418.20079238105626 0.0 418.20079238105626 0.0 25.37815127382704 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}KGY{M(Oxidation (M))|F}PE 3.7027 - 3241 1 1.053 389989.9 1.0 8420 5524 13938 HBL1_DMSO_200M_050219_1,13946 HBL1_DMSO_200M_050219_1,13946,FPFYGKPMRI False False FPFYGKPMRI 69.421945 424.557910144329 30483666.0 13938.0 ENSG00000125870|ENST00000246071|SNRPB2 7.365864117940267 3.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13947 69.433 625.0 205010.0 25 0 5296.1 -1 PLMTTMSEFFD 11 148 667.7841516316939 1333.5537503301878 2 668.2863036990166 MULTI CID FTMS 0 0 0 13938 187821.28125 0.678209799413878 4 -0.2943344116210937 9 Oxidation (M) _PLM(Oxidation (M))TTMSEFFD_ ENST00000481014.6_1_11:8646046-8673385:-|nuORF;nc|ENSG00000166436|O15016-3|TRIM66 13.90604991867851 0.7458848613461305 3 [{I|L}P]{I|L}{I|L}V 5 -1 22.14 0.0 0.0 1.6602 0.0 0.0 0.0 795.1567526097377 795.1567526097377 7.319845938712035 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}P]{I|L}{I|L}V 1.6602 - 381 1 1.053 95041.1 1.0 8421 5524 13938 HBL1_DMSO_200M_050219_1,13947 HBL1_DMSO_200M_050219_1,13947,PLMTTMSEFFD False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 13948 69.447 800.0 73644.0 25 0 24145.0 -1 0 50 1187.8057213000716 3560.3953345004147 3 1188.140063464642 MULTI CID FTMS 0 0 0 13938 149601.4375 0.0893901325684455 8 -0.6562271118164062 10 3 K 1 -1 6.9897 0.0 0.0 0.19632 0.0 0.0 2702.0165025685774 727.2454297032066 3429.261932271784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.19632 - 17 + 1 1.053 55759.9 0.949999988079071 8422 5524 13938 HBL1_DMSO_200M_050219_1,13948 HBL1_DMSO_200M_050219_1,13948, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13949 69.461 800.0 399810.0 25 0 81465.0 + 42328 VSYVTFMEEVV 11 179 434.88240850470754 0 434.8823425173759 PEAK CID FTMS 0 0 0 13938 143758.453125 0.6036981159361616 -22 0.8346405029296875 11 Unmodified _VSYVTFMEEVV_ REV__ENST00000422095.1_3_7:92000906-92025787:+|nuORF 2.9952420565917617 0.4761840153648598 3 {I|L} 1 -1 6.9897 0.0 0.0 0.8055 0.0 0.0 433.5343044588307 318.1100252740844 751.6443297329151 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.8055 - 108 + 1 1.053 258717.4 0.8399999737739563 8423 5524 13938 HBL1_DMSO_200M_050219_1,13949 HBL1_DMSO_200M_050219_1,13949,VSYVTFMEEVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13950 69.468 398.0 395280.0 25 0 30470.0 27938 PLTRQISV 8 176 457.2772077596935 912.539862586187 2 457.2775146365166 MULTI CID FTMS 0 0 0 13938 135713.078125 0.1018247175189726 8 -0.6562271118164062 12 Unmodified _PLTRQISV_ ENSG00000141098|ENST00000268797|GFOD2;nc|ENSG00000141098|Q3B7J2-3|GFOD2 32.30548876998284 0.3644845974844379 3 {I|L}{I|L}SV 4 4 33.66 0.0 0.0 3.6886 0.0 0.0 482.261365165953 0.0 482.261365165953 0.0 15.13033184178645 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 {I|L}{I|L}SV 3.6886 - 173 1 1.053 124873.6 1.0 8424 5524 13938 HBL1_DMSO_200M_050219_1,13950 HBL1_DMSO_200M_050219_1,13950,PLTRQISV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13951 69.482 732.0 611250.0 25 0 22896.0 + 42333 VTAGPTGF 8 127 749.3826030702563 748.3753266036563 1 749.3828613162041 MULTI CID FTMS 0 0 0 13938 106841.9765625 0.0389100849376071 22 -1.8495025634765625 13 Unmodified _VTAGPTGF_ REV__ENSG00000110013|ENST00000263593|SIAE;REV__ENST00000436137.2_1_11:124530361-124543691:-|nuORF;REV__nc|ENSG00000110013|Q9HAT2-2|SIAE 46.92087301778293 0.1537303740847981 3 VTN{I|L}CS{I|L} 7 -1 + 66.755 0.0 0.0 8.92 8.92 89.365 0.0 0.0 0.0 17.431798021531115 4.433760376774067 4.433760376774067 4.433760376774067 0 1.3411290632962718 1.0 1.7931576817365436 0.2887254899964357 VTN{I|L}CS{I|L};VTN{I|L}TCV;VTN{I|L}SC{I|L};VTQVCS{I|L};VTGG{I|L}CS{I|L};VTQVTCV;VTQVSC{I|L};VTNT{I|L}CV;VTGG{I|L}TCV;{[QS]|[NT]}V{I|L}CTV 8.92;8.3276;8.0412;7.7297;7.2874;7.1373;6.8509;6.7544;6.695;6.6499 -;-;-;-;-;-;-;-;-;- 2204 + 1 1.053 302983.5 1.0 8425 5524 13938 HBL1_DMSO_200M_050219_1,13951 HBL1_DMSO_200M_050219_1,13951,VTAGPTGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13952 69.493 682.0 179050.0 25 0 24406.0 + 35871 SVLLGQFHMLI 11 152 629.353253449814 0 629.3500854372978 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _SVLLGQFHMLI_ REV__ENSG00000064989|ENST00000392370|CALCRL 13.042465956692816 0.4221659143281722 3 {I|L}E 2 -1 5.2763 0.0 0.0 0.41986 0.0 0.0 844.4225275521686 167.11919580631096 1011.5417233584795 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 {I|L}E 0.41986 - 378 + 1 1.053 98381.8 1.0 8426 5524 13938 HBL1_DMSO_200M_050219_1,13952 HBL1_DMSO_200M_050219_1,13952,SVLLGQFHMLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13954 69.498 1.6 36074000.0 25 0 3301400.0 + 26179 NQFPGFKEV 9 84 533.2720326860506 1064.529512438901 2 533.2722045779228 MULTI CID FTMS 0 0 0 13953 32888342.0 0.8851458736881337 -1 0.0977554321289062 1 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 32.78568957990786 0.1150597335874693 3 SK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 7 7 41.687 0.0 0.0 3.916 0.0 0.0 214.1075001447281 0.0 214.1075001447281 0.0 22.42947589513584 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 SK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 3.916 - 249 1 1.057 50015.0 1.0 8427 5525 13953 HBL1_DMSO_200M_050219_1,13954 HBL1_DMSO_200M_050219_1,13954,NQFPGFKEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13955 69.499 3.4 11644000.0 25 0 1551900.0 + 37121 TGYLNTVTV 9 59 484.25839615362605 966.502239374052 2 484.2587463259697 MULTI CID FTMS 0 0 0 13953 16074396.0 0.0379819204274693 30 -2.39013671875 2 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 43.85829265575387 0.0542763391141878 3 TN{I|L}CTV 6 5 45.526 0.0 0.0 4.7103 0.0 0.0 317.1884709187771 0.0 317.1884709187771 0.0 36.45750937337162 0.0 0.0 0 0.0 0.0 1.1307196863200843 0.5 TN{I|L}CTV 4.7103 - 106 + 1 1.057 34939.1 1.0 8428 5525 13953 HBL1_DMSO_200M_050219_1,13955 HBL1_DMSO_200M_050219_1,13955,TGYLNTVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13956 69.5 3.1 20601000.0 25 0 2689500.0 + 43845 YFIAPTGHSL 10 73 553.2872852090301 1104.56001748486 2 553.2877075076103 MULTI CID FTMS 0 0 0 13953 15660730.0 0.7726146240743981 2 -0.153472900390625 3 Unmodified _YFIAPTGHSL_ ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11 71.13359017698441 0.0189001043006994 3 GTPA{I|L}[YE] 7 9 44.358 0.0 0.0 4.0159 0.0 0.0 355.1864186017594 0.0 355.1864186017594 0.0 10.22325071085504 0.0 0.0 0 0.9247425010840048 0.0 1.2302046884880935 0.0 GTPA{I|L}[YE] 4.0159 - 410 1 1.057 56587.4 1.0 8429 5525 13953 HBL1_DMSO_200M_050219_1,13956 HBL1_DMSO_200M_050219_1,13956,YFIAPTGHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13957 69.501 4.8 9217700.0 25 0 1362300.0 + 21732 LPLVGQLF 8 62 443.7734510303929 885.5323491275858 2 443.7736694216728 MULTI CID FTMS 0 0 0 13953 11428349.0 0.6686984265704601 9 -0.77044677734375 4 Unmodified _LPLVGQLF_ REV__ENST00000554467.5_1_12:57625133-57626138:+|nuORF 19.438996006549623 0.6237395211498085 3 {I|L}P 2 -1 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3739276576472 672.3739276576472 18.3888594289104 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}P 5.0564 + + 81 + 1 1.057 39703.1 1.0 8430 5525 13953 HBL1_DMSO_200M_050219_1,13957 HBL1_DMSO_200M_050219_1,13957,LPLVGQLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13958 69.502 5.5 7165400.0 25 0 872720.0 + 21227 LPDGRTLIV 9 60 492.2987000704332 982.5828472076664 2 492.2998840212822 MULTI CID FTMS 0 0 0 13953 6440152.0 0.5596907868293266 2 -0.153472900390625 5 Unmodified _LPDGRTLIV_ ENSG00000106829|ENST00000376552|TLE4;ENSG00000140332|ENST00000451782|TLE3;ENST00000462803.5_1_9:82286241-82340056:+|nuORF;ENST00000557815.1_1_15:70346775-70346994:-|nuORF;nc|ENSG00000106829|Q04727-2|TLE4;nc|ENSG00000106829|Q04727-3|TLE4;nc|ENSG00000106829|Q04727-4|TLE4;nc|ENSG00000140332|Q04726-2|TLE3;nc|ENSG00000140332|Q04726-3|TLE3;nc|ENSG00000140332|Q04726-4|TLE3;nc|ENSG00000140332|Q04726-6|TLE3;nc|ENSG00000140332|Q04726-7|TLE3;nc|ENSG00000140332|Q04726|TLE3 20.41453444215458 0.284085796332423 3 {I|L}P 2 7 34.464 0.0 0.0 3.5075 0.0 0.0 0.0 769.4221895807249 769.4221895807249 15.708253071758875 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + {I|L}P 3.5075 + + 15 + 1 1.057 37735.2 1.0 8431 5525 13953 HBL1_DMSO_200M_050219_1,13958 HBL1_DMSO_200M_050219_1,13958,LPDGRTLIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13959 69.503 7.2 4351200.0 25 0 585620.0 + 22718 LQGQHLIQL 9 63 525.3095752952198 1048.6045976572395 2 524.8099243044853 MULTI CID FTMS 0 0 0 13953 4290483.0 0.8782836870620143 2 -0.153472900390625 6 Unmodified _LQGQHLIQL_ REV__ENSG00000090539|ENST00000204604|CHRD;REV__ENST00000470150.5_1_3:184098136-184100834:+|nuORF;REV__nc|ENSG00000090539|Q9H2X0-5|CHRD 14.838274106304384 0.4350285940865338 3 TYC(Carbamidomethyl (C))[VP] 5 -1 13.188 0.0 0.0 1.2576 0.0 0.0 410.3356659559181 0.0 410.3356659559181 0.0 -0.8978030532459513 -0.8978030532459513 0.0 0 0.0 0.0 0.0 0.0 TYC(Carbamidomethyl (C))[VP] 1.2576 - 86 + 1 1.057 33216.4 1.0 8432 5525 13953 HBL1_DMSO_200M_050219_1,13959 HBL1_DMSO_200M_050219_1,13959,LQGQHLIQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13960 69.505 13.0 5508400.0 25 0 645410.0 -1 0 70 320.211539464139 319.204262997539 1 320.2113830447197 MULTI CID FTMS 0 0 0 13953 4137531.75 0.613994583978641 4 -0.33001708984375 7 3 HP 2 -1 32.167 0.0 0.0 10.077 0.0 0.0 0.0 82.06701837711171 82.06701837711171 4.242049739282258 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.0 0.0 HP 10.077 - 12 + 1 1.057 64112.7 1.0 8433 5525 13953 HBL1_DMSO_200M_050219_1,13960 HBL1_DMSO_200M_050219_1,13960, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13961 69.506 16.0 2374800.0 25 0 160120.0 + 41413 VPLDKQITI 9 80 513.8132827839034 1025.6120126346068 2 513.8137695193291 MULTI CID FTMS 0 0 0 13953 3015513.75 0.2016416618995286 4 -0.33001708984375 8 Unmodified _VPLDKQITI_ ENSG00000163938|ENST00000418458|GNL3;nc|ENSG00000163938|Q9BVP2-2|GNL3 41.95555342248728 0.0647214845423414 3 VP{I|L}D 4 5 51.459 0.0 0.0 5.0174 0.0 0.0 0.0 598.3551119440061 598.3551119440061 7.139472062827394 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.3494850021680094 0.0 + VP{I|L}D 5.0174 + + 216 + 1 1.057 40548.7 1.0 8434 5525 13953 HBL1_DMSO_200M_050219_1,13961 HBL1_DMSO_200M_050219_1,13961,VPLDKQITI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13962 69.507 16.0 1257600.0 25 0 137830.0 13992 HYYESDTLL 9 41 570.7641274571915 1139.513701981183 2 570.7642700076103 MULTI CID FTMS 0 0 0 13953 2918056.0 0.7674007677542176 2 -0.153472900390625 9 Unmodified _HYYESDTLL_ ENSG00000172890|ENST00000319023|NADSYN1;ENST00000524949.5_1_11:71164342-71175189:+|nuORF;ENST00000525245.1_1_11:71164408-71171979:+|nuORF;ENST00000527538.5_1_11:71164342-71170844:+|nuORF;ENST00000533769.5_1_11:71164342-71177788:+|nuORF 9.347437153973935 0.588369872918737 3 {[WN]|[YH]}Y 3 6 25.686 0.0 0.0 2.2542 0.0 0.0 0.0 673.3045704716704 673.3045704716704 11.706962271689749 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + {[WN]|[YH]}Y 2.2542 + + 10 1 1.057 24044.9 1.0 8435 5525 13953 HBL1_DMSO_200M_050219_1,13962 HBL1_DMSO_200M_050219_1,13962,HYYESDTLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13963 69.508 28.0 1772300.0 25 0 171810.0 + 35938 SVPESPEFVRV 11 52 623.3275420605378 1244.6405311878757 2 623.3273193240166 MULTI CID FTMS 0 0 0 13953 1830430.0 0.4653839494493106 4 -0.33001708984375 10 Unmodified _SVPESPEFVRV_ ENSG00000084090|ENST00000337288|STARD7 19.62595529434964 0.626904505265593 3 [VS]PESPK 7 5 57.465 0.0 0.0 4.617 0.0 0.0 0.0 517.2418917291624 517.2418917291624 31.779032320494807 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.4247425010840047 0.0 [VS]PESPK 4.617 - 45 + 1 1.057 42424.4 1.0 8436 5525 13953 HBL1_DMSO_200M_050219_1,13963 HBL1_DMSO_200M_050219_1,13963,SVPESPEFVRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13964 69.509 28.0 1490100.0 25 0 336930.0 42129 VRRLPGGG 8 61 406.24857980309577 810.4826066729916 2 406.2484924197197 MULTI CID FTMS 0 0 0 13953 1818685.75 0.1157354146907427 9 -0.77044677734375 11 Unmodified _VRRLPGGG_ ENST00000497505.5_1_2:203879615-203880929:+|nuORF 0.0 0.8243325171867699 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.057 37075.5 1.0 8437 5525 13953 HBL1_DMSO_200M_050219_1,13964 HBL1_DMSO_200M_050219_1,13964,VRRLPGGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13965 69.511 28.0 1603700.0 25 0 247740.0 + 27936 PLTRPSRE 8 66 478.2697038225996 954.5248547119992 2 478.2697021365166 MULTI CID FTMS 0 0 0 13953 1585901.375 0.5687550017958498 -6 0.4162216186523437 12 Unmodified _PLTRPSRE_ REV__ENSG00000128973|ENST00000249806|CLN6;REV__nc|ENSG00000128973|Q9NWW5-2|CLN6 2.302733041254933 0.8103549651115762 3 {I|L} 1 -1 11.259 0.0 0.0 1.1795 0.0 0.0 823.4296989276227 0.0 823.4296989276227 0.0 1.3442265614629 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1795 + + 4 + 1 1.057 41223.7 1.0 8438 5525 13953 HBL1_DMSO_200M_050219_1,13965 HBL1_DMSO_200M_050219_1,13965,PLTRPSRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13966 69.512 34.0 1429100.0 25 0 315960.0 + 40945 VLTTVAPK 8 67 414.76211459499535 827.5096762567907 2 414.7618286013603 MULTI CID FTMS 0 0 0 13953 1467118.625 0.1206597759084198 9 -0.77044677734375 13 Unmodified _VLTTVAPK_ REV__ENSG00000172534|ENST00000310441|HCFC1;REV__nc|ENSG00000172534|P51610-2|HCFC1;REV__nc|ENSG00000172534|P51610-4|HCFC1 0.6903765706972694 0.8201419426409876 3 {I|L} 1 -1 10.379 0.0 0.0 1.2542 0.0 0.0 696.4143373669455 0.0 696.4143373669455 0.0 10.289959734888432 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2542 + + 2 + 1 1.057 45132.3 1.0 8439 5525 13953 HBL1_DMSO_200M_050219_1,13966 HBL1_DMSO_200M_050219_1,13966,VLTTVAPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13967 69.513 20.0 1542200.0 25 0 225450.0 39735 VEKKGVPSV 9 62 471.78519209111215 941.5558312490244 2 471.7851440310478 MULTI CID FTMS 0 0 0 13953 1397620.125 0.1685904887310714 4 -0.33001708984375 14 Unmodified _VEKKGVPSV_ ENSG00000113504|ENST00000264930|SLC12A7 12.531546534597751 0.4974689918368763 3 [DV][{I|L}V]GKA[Q{I|L}] 9 7 + 39.6 0.0 0.0 4.2058 4.2058 83.95 0.0 0.0 0.0 24.9954560446188 -12.730012720637369 -12.730012720637369 14.43697499232713 0 0.4247425010840047 2.0 0.0 0.0 [DV][{I|L}V]GKA[Q{I|L}];[DV][{I|L}V][KQ][Q{I|L}] 4.2058;2.6724 -;- 62 1 1.057 30982.5 1.0 8440 5525 13953 HBL1_DMSO_200M_050219_1,13967 HBL1_DMSO_200M_050219_1,13967,VEKKGVPSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13968 69.514 32.0 1486700.0 25 0 154840.0 + 11519 GIPAEVPHI 9 74 466.76377751086176 931.5130020885236 2 466.7639037966728 MULTI CID FTMS 0 0 0 13953 1313061.5 0.5689041504228237 -3 0.2675094604492187 15 Unmodified _GIPAEVPHI_ ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1 46.92087301778293 0.0471210510596396 3 {[VA]|[{I|L}G]}PAEVPH{I|L} 9 0 + 63.254 0.0 0.0 6.7905 6.7905 93.001 0.0 0.0 0.0 38.51773352159597 12.754537344402904 12.754537344402904 19.035984316004217 0 0.2614393726401688 2.0 0.3807196863200844 0.0 + + {[VA]|[{I|L}G]}PAEVPH{I|L};{[VA]|[{I|L}G]}PA[WY]{I|L}{I|L};{[VA]|[{I|L}G]}[KQ]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L} 6.7905;4.7469;3.7555 +;-;- + 260 + 1 1.057 42846.2 1.0 8441 5525 13953 HBL1_DMSO_200M_050219_1,13968 HBL1_DMSO_200M_050219_1,13968,GIPAEVPHI True True GIPAEVPHI 69.514084 466.763903796673 32533316.0 13953.0 ENSG00000153207|ENST00000648844|AHCTF1;;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;;nc|ENSG00000153207|Q8WYP5-3|AHCTF1 5.444956461588542 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13969 69.515 37.0 1303100.0 25 0 122240.0 + 1954 AMNQLIVAL 9 85 486.7821981124004 971.5498432916008 2 486.7832519412041 MULTI CID FTMS 0 0 0 13953 903063.75 0.8033814812957326 -3 0.2675094604492187 16 Unmodified _AMNQLIVAL_ REV__ENSG00000137868|ENST00000395105|STRA6;REV__ENST00000574439.5_1_15:74472423-74490170:-|nuORF;REV__nc|ENSG00000137868|Q9BX79-3|STRA6;REV__nc|ENSG00000137868|Q9BX79-4|STRA6;REV__nc|ENSG00000137868|Q9BX79-5|STRA6;REV__nc|ENSG00000137868|Q9BX79-6|STRA6 5.230669730166228 0.7320841359114558 3 {I|L} 1 -1 10.969 0.0 0.0 1.129 0.0 0.0 840.4546722484353 0.0 840.4546722484353 0.0 1.136218907515314 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.129 + + 10 + 1 1.057 42778.1 1.0 8442 5525 13953 HBL1_DMSO_200M_050219_1,13969 HBL1_DMSO_200M_050219_1,13969,AMNQLIVAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13970 69.516 40.0 1036300.0 25 0 140370.0 + 14333 IEQVRPNYL 9 65 566.3115234879363 1130.6084940426724 2 566.3130370974541 MULTI CID FTMS 0 0 0 13953 768550.4375 0.1821067161809621 9 -0.77044677734375 17 Unmodified _IEQVRPNYL_ REV__ENSG00000115364|ENST00000393909|MRPL19 17.44264345198275 0.3645313841742926 3 {I|L}P 2 -1 32.518 0.0 0.0 2.8762 0.0 0.0 0.0 917.4494376870416 917.4494376870416 10.0 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 {I|L}P 2.8762 - 41 + 1 1.057 38659.1 1.0 8443 5525 13953 HBL1_DMSO_200M_050219_1,13970 HBL1_DMSO_200M_050219_1,13970,IEQVRPNYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13971 69.518 39.0 1028500.0 25 0 73327.0 + -1 LVGFVMLPL 9 69 502.79627367398126 1003.5779944147624 2 502.7967712283134 MULTI CID FTMS 0 0 0 13953 836092.3125 0.338734517571331 -6 0.4162216186523437 18 Oxidation (M) _LVGFVM(Oxidation (M))LPL_ REV__ENSG00000112499|ENST00000366953|SLC22A2;REV__ENST00000486916.5_1_6:160592405-160666544:-|nuORF 5.230669730166228 0.7320841359114558 3 {I|L} 1 -1 11.109 0.0 0.0 1.107 0.0 0.0 872.4832048413235 0.0 872.4832048413235 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.107 + + 23 + 1 1.057 35965.4 1.0 8444 5525 13953 HBL1_DMSO_200M_050219_1,13971 HBL1_DMSO_200M_050219_1,13971,LVGFVMLPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13972 69.519 72.0 383140.0 25 0 49133.0 20941 LNFFIIIIS 9 59 540.3303624236495 1078.6461719140989 2 540.3303100466728 MULTI CID FTMS 0 0 0 13953 595507.75 0.3289159928832453 4 -0.33001708984375 19 Unmodified _LNFFIIIIS_ Tigger1_dup3614|chr4:153370819-153372334:-|1.1451237488797577|0.4461990466272801|1.36|48.0|1|1|sense 2.059750862983233 0.8427793054688888 3 {I|L} 1 8 10.596 0.0 0.0 0.98234 0.0 0.0 947.55089405941 0.0 947.55089405941 0.0 5.111381973555762 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.98234 + + 10 + 1 1.057 26505.0 1.0 8445 5525 13953 HBL1_DMSO_200M_050219_1,13972 HBL1_DMSO_200M_050219_1,13972,LNFFIIIIS False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 13973 69.521 90.0 527220.0 25 0 39808.0 + 24195 MAFKQMEQI 9 83 563.2744248915362 1124.5342968498724 2 563.2758056521416 MULTI CID FTMS 0 0 0 13953 377209.5625 0.2096604130725122 -3 0.2675094604492187 20 Unmodified _MAFKQMEQI_ ENSG00000144834|ENST00000478951|TAGLN3;ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 12.531546534597751 0.4974689918368763 3 [VS]{[QS]|[NT]}{I|L}W{M(Oxidation (M))|F}C(Carbamidomethyl (C))V 9 9 + 43.957 0.0 0.0 3.9089 3.9089 52.268 0.0 0.0 0.0 0.981140874450297 2.886829233229556 0.981140874450297 0.0 0 0.4247425010840047 2.0 0.0 0.0 [VS]{[QS]|[NT]}{I|L}W{M(Oxidation (M))|F}C(Carbamidomethyl (C))V;[VS]V[QT]W{M(Oxidation (M))|F}C(Carbamidomethyl (C))V;[YN]{M(Oxidation (M))|F}W[QT]V[PA];[YN]{M(Oxidation (M))|F}W{I|L}{[QS]|[NT]}[PA];[VS]V[QT]W{M(Oxidation (M))|F}[CG]V;[VS]{[QS]|[NT]}{I|L}W{M(Oxidation (M))|F}[CG]V 3.9089;3.9089;3.4352;3.4352;3.09;3.09 -;-;-;-;-;- 113 + 1 1.057 42859.6 1.0 8446 5525 13953 HBL1_DMSO_200M_050219_1,13973 HBL1_DMSO_200M_050219_1,13973,MAFKQMEQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13975 69.526 3.0 16698000.0 25 0 2451600.0 + 39842 VFDLIPISW 9 71 545.300390678219 1088.5862284232378 2 545.3009521365166 MULTI CID FTMS 0 0 0 13974 17461308.0 1.0 0 0.0 1 Unmodified _VFDLIPISW_ REV__ENSG00000163001|ENST00000349456|CFAP36;REV__nc|ENSG00000163001|Q96G28-2|CFAP36 28.486842064014134 0.1687311288560894 3 [{M(Oxidation (M))|F}V]D{I|L} 4 -1 41.911 0.0 0.0 3.8501 0.0 0.0 0.0 611.3220308893186 611.3220308893186 9.075674083184069 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.4247425010840047 0.0 [{M(Oxidation (M))|F}V]D{I|L} 3.8501 + + 182 + 1 1.057 45164.1 1.0 8447 5526 13974 HBL1_DMSO_200M_050219_1,13975 HBL1_DMSO_200M_050219_1,13975,VFDLIPISW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13976 69.527 15.0 2807300.0 25 0 195870.0 + 41067 VMPGPLSQGAV 11 79 528.2793390778404 1054.5441252224807 2 528.2768432497978 MULTI CID FTMS 0 0 0 13974 2448174.0 1.0 0 0.0 2 Unmodified _VMPGPLSQGAV_ REV__ENSG00000109906|ENST00000335953|ZBTB16;REV__ENST00000541602.5_1_11:113934022-114057819:+|nuORF;REV__nc|ENSG00000109906|Q05516-2|ZBTB16 18.373094154950223 0.6529654022026722 3 VDEP[DP] 6 -1 25.406 0.0 0.0 2.4092 0.0 0.0 384.2475147931656 0.0 384.2475147931656 0.0 -3.521825181113627 -3.521825181113627 0.0 0 0.0 0.0 0.0 0.0 VDEP[DP] 2.4092 - 71 1 1.057 40491.4 1.0 8448 5526 13974 HBL1_DMSO_200M_050219_1,13976 HBL1_DMSO_200M_050219_1,13976,VMPGPLSQGAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13977 69.528 21.0 2038100.0 25 0 244210.0 + -1 VLTGRVCIV 9 67 508.79829943330793 1015.582045933416 2 508.7966491580009 MULTI CID FTMS 0 0 0 13974 2524509.25 0.6602316869903908 -5 0.3784103393554687 3 Carbamidomethyl (C) _VLTGRVC(Carbamidomethyl (C))IV_ REV__nc|ENSG00000248905|Q68DA7-3|FMN1;REV__nc|ENSG00000248905|Q68DA7-5|FMN1 2.059750862983233 0.8427793054688888 3 Y 1 -1 0.48455 0.0 0.0 0.047712 0.0 0.0 487.8602574586096 361.6425875299438 849.5028449885534 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.047712 - 2 + 1 1.057 39216.3 1.0 8449 5526 13974 HBL1_DMSO_200M_050219_1,13977 HBL1_DMSO_200M_050219_1,13977,VLTGRVCIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13978 69.529 21.0 1368600.0 25 0 221370.0 + -1 LMWWSPGV 8 63 496.2378657400438 990.4611785468876 2 496.7412597537041 MULTI CID FTMS 0 0 0 13974 1581748.875 0.1986672329958531 31 -2.549842834472656 4 Oxidation (M) _LM(Oxidation (M))WWSPGV_ REV__ENST00000416648.1_1_3:183605526-183606234:+|nuORF 6.354104778181461 0.7857632046190106 3 V 1 -1 15.485 0.0 0.0 1.5634 0.0 0.0 873.3815485803822 0.0 873.3815485803822 0.0 10.422881389671655 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.5634 + + 24 + 1 1.057 27753.9 1.0 8450 5526 13974 HBL1_DMSO_200M_050219_1,13978 HBL1_DMSO_200M_050219_1,13978,LMWWSPGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13979 69.533 225.0 253850.0 25 0 46985.0 + 19020 LDKYLLKRV 9 88 574.3620043938002 0 574.3616821169853 PEAK CID FTMS 0 0 0 13974 1028972.0 0.6766358087024867 4 -0.3338775634765625 5 Unmodified _LDKYLLKRV_ REV__ENSG00000151461|ENST00000357604|UPF2 2.059750862983233 0.3444685223463734 3 Y 1 -1 6.9897 0.0 0.0 0.60954 0.0 0.0 212.24242812178164 768.3828278150089 980.6252559367906 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.60954 + + 10 + 1 1.057 51354.2 1.0 8451 5526 13974 HBL1_DMSO_200M_050219_1,13979 HBL1_DMSO_200M_050219_1,13979,LDKYLLKRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13980 69.535 66.0 1039100.0 25 0 83853.0 + 41193 VPEEMFREV 9 78 568.2763988849159 1134.5382448366315 2 568.2766601443291 MULTI CID FTMS 0 0 0 13974 869087.25 0.4252908380434622 -2 0.1256942749023437 6 Unmodified _VPEEMFREV_ ENSG00000157212|ENST00000404141|PAXIP1 33.4449034751529 0.1114409586740657 3 VPEEM{M(Oxidation (M))|F}{[RE]|[WV]}V 9 0 + 73.649 0.0 0.0 6.4916 6.4916 90.254 0.0 0.0 0.0 46.20203296936165 3.42261388523842 3.42261388523842 9.948500216800944 0 0.7742275032520141 1.5228787452803376 1.1861818737241734 0.0 + + VPEEM{M(Oxidation (M))|F}{[RE]|[WV]}V;VPEE{I|L}[TA]{[YD]|[{M(Oxidation (M))|F}M]}V;VPEE{[RE]|[WV]}{[YD]|[{M(Oxidation (M))|F}M]}V;[{M(Oxidation (M))|F}V][R{M(Oxidation (M))|F}]ME[HA]V;[{M(Oxidation (M))|F}V][VG]{M(Oxidation (M))|F}M[HC]PV;[{I|L}T][HC]M{M(Oxidation (M))|F}{[RE]|[WV]}V 6.4916;5.6147;5.2143;1.3503;0.90461;0.60042 +;-;-;-;-;- + 105 + 1 1.057 59194.0 1.0 8452 5526 13974 HBL1_DMSO_200M_050219_1,13980 HBL1_DMSO_200M_050219_1,13980,VPEEMFREV True True VPEEMFREV 69.534913 568.276660144329 35772060.0 13974.0 ENSG00000157212|ENST00000404141|PAXIP1 8.82613436381022 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13981 69.537 102.0 443030.0 25 0 39217.0 + 23468 LTGVPVRIYL 10 79 565.8484971448567 0 565.8483154177666 PEAK CID FTMS 0 0 0 13974 659018.75 1.0 0 0.0 7 Unmodified _LTGVPVRIYL_ REV__ENSG00000101181|ENST00000370823|MTG2;REV__ENST00000466099.1_1_20:60768659-60775121:+|nuORF 7.289230182591677 0.3953776778296116 3 PN 2 -1 12.391 0.0 0.0 1.0968 0.0 0.0 112.15615154967357 803.4069307916624 915.563082341336 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 PN 1.0968 - 21 + 1 1.057 40588.7 1.0 8453 5526 13974 HBL1_DMSO_200M_050219_1,13981 HBL1_DMSO_200M_050219_1,13981,LTGVPVRIYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 13982 69.544 365.0 611640.0 25 0 50013.0 + 13908 HVVEILVET 9 194 519.79495259044 1037.5753522476798 2 519.7953369021416 MULTI CID FTMS 0 0 0 13974 451512.0625 0.0316454391484625 47 -3.909950256347656 8 Unmodified _HVVEILVET_ ENSG00000170779|ENST00000336219|CDCA4 57.47134341890925 0.0274820932774257 3 [HV]VE{I|L}{I|L}VET 9 0 + 48.846 0.0 0.0 4.7077 4.7077 75.352 0.0 0.0 0.0 9.72689062979554 8.384767769392738 8.384767769392738 2.430380486862944 0 0.5138793319624578 1.3010299956639813 0.2614393726401688 0.0 + + [HV]VE{I|L}{I|L}VET;[HV]{I|L}D{I|L}{I|L}VET;[HV]VE{I|L}V{I|L}ET;[HV]V{I|L}E{I|L}VET;[{M(Oxidation (M))|F}T]V{I|L}{I|L}V{M(Oxidation (M))|F}VT;[HV]{I|L}D{I|L}V{I|L}ET;{NN|[MP]|[D{I|L}]|[EV]}HV{I|L}{I|L}VET;[HV]{I|L}VE{I|L}VET;[HV]{I|L}EV{I|L}VET;[{I|L}V]HD{I|L}{I|L}VET 4.7077;4.4734;3.8754;3.8373;3.7702;3.6412;3.6031;3.603;3.5537;3.3688 +;-;-;-;-;-;-;-;-;- + 1781 1 1.057 172004.1 1.0 8454 5526 13974 HBL1_DMSO_200M_050219_1,13982 HBL1_DMSO_200M_050219_1,13982,HVVEILVET True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13983 69.55 367.0 349350.0 25 0 55347.0 + 38756 TVATENEVFRV 11 114 632.8290410302736 1263.6435291273472 2 632.8303100466728 MULTI CID FTMS 0 0 0 13974 396807.25 0.8780514385353095 3 -0.3020782470703125 9 Unmodified _TVATENEVFRV_ ENSG00000163565|ENST00000295809|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16;nc|ENSG00000163565|Q16666-8|IFI16 67.08073823543168 0.0408645806987127 3 {[TV]|[{I|L}S]}ATENEV{M(Oxidation (M))|F}RV 11 0 + 99.774 0.0 0.0 7.8957 7.8957 92.178 0.0 0.0 0.0 85.67079227273399 9.050023300178395 9.050023300178395 9.128498242810991 0 1.274227503252014 2.0 0.805462187404089 0.3807196863200844 + + {[TV]|[{I|L}S]}ATENEV{M(Oxidation (M))|F}RV;{[TV]|[{I|L}S]}ATEGGEV{M(Oxidation (M))|F}RV;{[TV]|[{I|L}S]}AVMNEV{M(Oxidation (M))|F}RV;{[TV]|[{I|L}S]}VAMNEV{M(Oxidation (M))|F}RV;{[TV]|[{I|L}S]}AVMGGEV{M(Oxidation (M))|F}RV;{[TV]|[{I|L}S]}VAMN[Y{I|L}]TGPV;{[TV]|[{I|L}S]}ATEN[Y{I|L}][PG]S{I|L};{[TV]|[{I|L}S]}VAMGGEV{M(Oxidation (M))|F}RV;{[TV]|[{I|L}S]}ATEN[Y{I|L}]TGPV;{[TV]|[{I|L}S]}AVMN[Y{I|L}][PG]S{I|L} 7.8957;7.1733;7.0796;6.6077;6.3572;6.025;5.9726;5.8853;5.8494;5.8288 +;-;-;-;-;-;-;-;-;- + 1327 + 1 1.057 98265.7 1.0 8455 5526 13974 HBL1_DMSO_200M_050219_1,13983 HBL1_DMSO_200M_050219_1,13983,TVATENEVFRV True True TVATENEVFRV 69.550309 632.830310046673 5590664.5 13974.0 ENST00000493884.5_1_1:158984458-159022017:+|nuORF;;nc|ENSG00000163565|Q16666-2|IFI16;;nc|ENSG00000163565|Q16666-6|IFI16;;nc|ENSG00000163565|Q16666-8|IFI16;;nc|ENSG00000163565|Q16666-3|IFI16;;ENSG00000163565|ENST00000295809|IFI16 8.32994302113851 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13984 69.558 411.0 550530.0 25 0 52236.0 + -1 TYLVGNSL 8 162 866.9067123982009 1731.7988718632016 2 867.4014770388603 MULTI CID FTMS 0 0 0 13974 377149.75 0.0209581431456296 49 -3.978584289550781 10 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENSG00000136628|ENST00000366923|EPRS1 0.0 0.8751479354844584 3 [NP]{I|L}DVY[{M(Oxidation (M))|F}E]AD{I|L}NP[EP] 15 -1 + 76.182 0.0 0.0 4.399 4.399 75.964 0.0 0.0 0.0 10.791812460476253 7.617608341954735 7.617608341954735 3.279550148593472 0 0.0 0.958607314841775 0.9674165578762486 0.6109243748081782 [NP]{I|L}DVY[{M(Oxidation (M))|F}E]AD{I|L}NP[EP];[NP]{I|L}DVY[{M(Oxidation (M))|F}E]AN{I|L}DP[EP];[NP]{I|L}NM[RH]DAD{I|L}NP[EP];[NP]{I|L}[VS]HSQDAD{I|L}NP[EP];[NP]{I|L}DVK{[CP]|[EA]}[C(Carbamidomethyl (C))H]{I|L}NP[EP];[NP]{I|L}[VS]HSQDAN{I|L}DP[EP];[NP]{I|L}DVY[{M(Oxidation (M))|F}E]AD{I|L}GGP[EP];[NP]{I|L}[WH]SQDAD{I|L}NP[EP];[NP]{I|L}[VS]HSNEAD{I|L}NP[EP];{[QV]|[N{I|L}]|[RA]|[KV]}PDVY[{M(Oxidation (M))|F}E]AD{I|L}NP[EP] 4.399;4.2096;4.1052;4.0812;3.9559;3.8918;3.8775;3.8676;3.7777;3.7758 -;-;-;-;-;-;-;-;-;- 63987 1 1.057 148228.1 1.0 8456 5526 13974 HBL1_DMSO_200M_050219_1,13984 HBL1_DMSO_200M_050219_1,13984,RCHRRRRRCCC False False TYLVGNSL 69.557665 867.3984 7386301.5 13974.0 ENSG00000136628|ENST00000366923|EPRS1 1.091113306581974 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13985 69.565 383.0 390280.0 25 0 30990.0 + 26152 NPYDRGSAFAI 11 168 605.7963334350826 1209.578113936965 2 605.7977172732353 MULTI CID FTMS 0 0 0 13974 371557.5 0.5177503674596526 -2 0.1256942749023437 11 Unmodified _NPYDRGSAFAI_ ENSG00000079785|ENST00000233084|DDX1 70.92866715596459 0.0297132693151486 3 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}DRTN{M(Oxidation (M))|F}A{I|L} 10 5 + 65.038 0.0 0.0 5.3769 5.3769 75.378 0.0 0.0 0.0 1.0130731382930378 16.53212513775344 1.0130731382930378 1.0130731382930378 0 1.7231975075880328 1.6989700043360187 0.0 1.4916440611282624 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}DRTN{M(Oxidation (M))|F}A{I|L};[NP]YDRTN{M(Oxidation (M))|F}A{I|L};{[TV]|[{I|L}S]}TD{I|L}{[C(Carbamidomethyl (C))G]|[NC]}N{M(Oxidation (M))|F}A{I|L};{[QN]|[E{I|L}]|[KN]}SS{I|L}{[C(Carbamidomethyl (C))G]|[NC]}N{M(Oxidation (M))|F}A{I|L};{[TV]|[{I|L}S]}ES{I|L}{[C(Carbamidomethyl (C))G]|[NC]}N{M(Oxidation (M))|F}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}DRTGG{M(Oxidation (M))|F}A{I|L};{[QN]|[E{I|L}]|[KN]}SS{I|L}{I|L}[DC]{M(Oxidation (M))|F}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}DRT{M(Oxidation (M))|F}NA{I|L};[NP]YDRTGG{M(Oxidation (M))|F}A{I|L};{[TV]|[{I|L}S]}TD[QT]TN{M(Oxidation (M))|F}A{I|L} 5.3769;5.2932;4.9368;4.6696;4.6479;4.6193;4.5663;4.5502;4.5355;4.487 -;-;-;-;-;-;-;-;-;- 4094 1 1.057 109059.9 1.0 8457 5526 13974 HBL1_DMSO_200M_050219_1,13985 HBL1_DMSO_200M_050219_1,13985,NPYDRGSAFAI True True NPYDRGSAFAI 69.564555 605.797717273235 19321126.0 13974.0 ENSG00000079785|ENST00000233084|DDX1 6.109141985575358 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13986 69.572 392.0 293310.0 25 0 25653.0 28019 PMVASHQSPLV 11 163 583.3047655689543 1164.5949782047085 2 583.3044921755791 MULTI CID FTMS 0 0 0 13974 333353.3125 0.0759058804897867 32 -2.7216567993164062 12 Unmodified _PMVASHQSPLV_ ENSG00000164050|ENST00000296440|PLXNB1;nc|ENSG00000164050|O43157-2|PLXNB1 17.11289562659939 0.6791789249425932 3 {I|L}A[PS]{I|L}[HQ]SV 9 7 33.632 0.0 0.0 2.8879 0.0 0.0 214.07063846037096 0.0 214.07063846037096 0.0 22.52307576675005 0.0 0.0 0 0.0 0.0 1.6791746928241125 1.086696871556164 {I|L}A[PS]{I|L}[HQ]SV 2.8879 - 1218 + 1 1.057 90838.8 1.0 8458 5526 13974 HBL1_DMSO_200M_050219_1,13986 HBL1_DMSO_200M_050219_1,13986,PMVASHQSPLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13987 69.579 413.0 344260.0 25 0 15463.0 -1 MKEMMMNLN 9 159 616.2449469025808 1230.4753408719614 2 616.2446166872978 MULTI CID FTMS 0 0 0 13974 281230.6875 1.0 0 0.0 13 Acetyl (Protein N-term),3 Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))KEM(Oxidation (M))M(Oxidation (M))MNLN_ ENST00000341681.9_2_2:39517464-39519941:-|nuORF 9.38312468134398 0.5871240394367778 3 D{I|L}SMV{[QV]|[N{I|L}]|[RA]|[KV]} 7 -1 25.964 0.0 0.0 2.1101 0.0 0.0 440.0853443830094 0.0 440.0853443830094 0.0 1.9179506706620304 0.0 0.0 0 0.3494850021680094 0.0 0.903598431600422 0.0 D{I|L}SMV{[QV]|[N{I|L}]|[RA]|[KV]} 2.1101 - 606 1 1.057 107454.0 1.0 8459 5526 13974 HBL1_DMSO_200M_050219_1,13987 HBL1_DMSO_200M_050219_1,13987,MKEMMMNLN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13988 69.586 420.0 149190.0 25 0 5302.1 + 15588 IPYPLSENNQV 11 125 637.3245343686755 1272.6345158041509 2 637.3270141482353 MULTI CID FTMS 0 0 0 13974 286111.25 0.0237033332568383 24 -2.0039520263671875 14 Unmodified _IPYPLSENNQV_ ENSG00000104549|ENST00000265896|SQLE 56.17704186161178 0.0846604386095034 3 [{I|L}P]YP{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]} 11 0 + 78.05 0.0 0.0 6.1329 6.1329 86.749 0.0 0.0 0.0 8.367421011425193 0.8354605145007525 0.8354605145007525 8.367421011425193 0 0.1803115997617927 1.5228787452803376 1.079689690656103 0.0 + + [{I|L}P]YP{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]YP{I|L}SEGGN{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]YP{I|L}SENGG{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SEGGN{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENGG{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]YP{I|L}SEGGGG{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SEGGGG{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}T]QQ{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}T]QQ{I|L}SEGGN{[QV]|[N{I|L}]|[RA]|[KV]} 6.1329;5.4754;5.4156;5.4156;4.7581;4.7581;4.7007;4.0432;3.2298;2.5125 +;-;-;-;-;-;-;-;-;- + 624 1 1.057 52744.7 1.0 8460 5526 13974 HBL1_DMSO_200M_050219_1,13988 HBL1_DMSO_200M_050219_1,13988,IPYPLSENNQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13989 69.597 531.0 496940.0 25 0 48698.0 + 24424 MGILERVV 8 189 458.76772601772586 915.5208991022516 2 458.7678710818291 MULTI CID FTMS 0 0 0 13974 252939.703125 0.3319385732802356 -2 0.1256942749023437 15 Unmodified _MGILERVV_ nc|ENSG00000119772|Q9Y6K1-2|DNMT3A 18.1463463914782 0.6428359029697936 3 MG{I|L}{I|L}V[RD]{I|L} 8 3 + 63.435 0.0 0.0 6.9289 6.9289 83.588 0.0 0.0 0.0 25.617968113107068 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 1.0 0.9208187539523752 0.0 0.3494850021680094 MG{I|L}{I|L}V[RD]{I|L};MG{I|L}{I|L}V{[RE]|[WV]}V;MG{I|L}V{I|L}[RD]{I|L};MG{I|L}V{I|L}{[RE]|[WV]}V;MG{I|L}{I|L}{I|L}[RD]V;MVA{I|L}V[RD]{I|L};MVA{I|L}V{[RE]|[WV]}V;MVAV{I|L}[RD]{I|L};MVAV{I|L}{[RE]|[WV]}V;MVA{I|L}{I|L}[RD]V 6.9289;6.6001;6.1654;5.8366;5.0809;4.8558;4.527;4.0924;3.7636;3.0078 -;-;-;-;-;-;-;-;-;- 824 + 1 1.057 203063.4 1.0 8461 5526 13974 HBL1_DMSO_200M_050219_1,13989 HBL1_DMSO_200M_050219_1,13989,MGILERVV False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 13990 69.607 573.0 210140.0 25 0 16592.0 + -1 YTIDTDNSTVAL 12 144 656.8169518219994 1311.6193507107987 2 656.8184692263603 MULTI CID FTMS 0 0 0 13974 236226.0625 0.9060229001315964 -2 0.1256942749023437 16 Carbamidomethyl (C) _EVTQQQC(Carbamidomethyl (C))HLVA_ nc|ENSG00000149657|Q9BX40-2|LSM14B;ENSG00000149657|ENST00000279068|LSM14B 20.41453444215458 0.6105011870913812 3 [YT]{NN|[MP]|[D{I|L}]|[EV]}{[ES]|[DT]|[{I|L}C]}NST 9 -1 46.893 0.0 0.0 3.5752 0.0 0.0 0.0 298.1743538748397 298.1743538748397 9.576870413686557 0.0 0.0 0.0 0 0.75 1.3979400086720375 1.9436726795685344 0.0 [YT]{NN|[MP]|[D{I|L}]|[EV]}{[ES]|[DT]|[{I|L}C]}NST 3.5752 - 1818 1 1.057 94023.6 1.0 8462 5526 13974 HBL1_DMSO_200M_050219_1,13990 HBL1_DMSO_200M_050219_1,13990,EVTQQQCHLVA False False YTIDTDNSTVAL 69.607007 656.81846922636 2887866.75 13974.0 nc|ENSG00000149657|Q9BX40-2|LSM14B;;ENSG00000149657|ENST00000279068|LSM14B 6.779678821563721 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13991 69.618 655.0 291420.0 25 0 20044.0 21366 LPFPPIQV 8 189 455.7716078352875 909.528662737375 2 455.7724182009697 MULTI CID FTMS 0 0 0 13974 209005.671875 0.9975739236957202 1 -0.1255340576171875 17 Unmodified _LPFPPIQV_ ENST00000602725.5_1_1:32373878-32374037:-|nuORF 36.46614268402704 0.2934124525509074 3 {[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}{I|L}NQV 8 4 + 43.97 0.0 0.0 4.8344 4.8344 74.458 0.0 0.0 0.0 1.696711066209282 8.424778212679485 1.696711066209282 1.696711066209282 0 0.3494850021680094 0.721246399047171 0.0 0.086696871556164 {[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}{I|L}NQV;[QP]V{I|L}{I|L}NQV;{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}N{I|L}QV;[{I|L}P]N{I|L}{I|L}NQV;[QP]V{I|L}N{I|L}QV;[AG]PV{I|L}{I|L}NQV;[QP]{I|L}V{I|L}NQV;[{I|L}P]N{I|L}N{I|L}QV;[AG]PV{I|L}N{I|L}QV;[{I|L}P]QV{I|L}NQV 4.8344;4.6478;4.6272;4.521;4.4407;4.4106;4.3169;4.3138;4.2035;4.19 -;-;-;-;-;-;-;-;-;- 609 1 1.057 152090.6 1.0 8463 5526 13974 HBL1_DMSO_200M_050219_1,13991 HBL1_DMSO_200M_050219_1,13991,LPFPPIQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13992 69.623 232.0 556210.0 25 0 39450.0 40040 VGGDAGDL 8 139 352.1657240918723 702.3168952505446 2 352.1653930544853 MULTI CID FTMS 0 0 0 13974 197938.53125 0.2366131768272706 -2 0.1256942749023437 18 Unmodified _VGGDAGDL_ ENST00000350498.7_1_7:98994100-98994295:-|nuORF 9.347437153973935 0.7675937258251505 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HC]A{I|L} 6 6 + 27.669 0.0 0.0 3.9397 3.9397 84.04 0.0 0.0 0.0 11.42667503568731 18.68948444925195 11.42667503568731 21.001159735598875 0 0.3054621874040891 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HC]A{I|L};[WP][C(Carbamidomethyl (C))Q]{I|L};{I|L}[WC(Carbamidomethyl (C))]G[PA] 3.9397;0.94939;0.02295 -;-;- 141 1 1.057 103716.4 1.0 8464 5526 13974 HBL1_DMSO_200M_050219_1,13992 HBL1_DMSO_200M_050219_1,13992,VGGDAGDL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 13993 69.634 600.0 376410.0 25 0 17884.0 + 2756 ATLNDGVVVQV 11 210 557.8078597915838 1113.6011666499676 2 557.8074828982353 MULTI CID FTMS 0 0 0 13974 194819.5625 0.4170733497315581 -2 0.1256942749023437 19 Unmodified _ATLNDGVVVQV_ ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF;nc|ENSG00000145907|Q13283-2|G3BP1 45.739877483867886 0.1412225664835785 3 {[QV]|[N{I|L}]|[RA]|[KV]}DTARVNQV 10 6 NQV + + 35.711 14.028 4.1117 3.2068 3.2068 50.586 0.0 0.0 0.0 1.9815694501833576 0.0 0.0 0.0 0 0.2742275032520141 0.5376020021010439 1.0629529932484498 1.0044321917401078 {[QV]|[N{I|L}]|[RA]|[KV]}DTARVNQV 3.2068 - 13356 1 1.057 174761.1 1.0 8465 5526 13974 HBL1_DMSO_200M_050219_1,13993 HBL1_DMSO_200M_050219_1,13993,ATLNDGVVVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13994 69.647 709.0 148150.0 25 0 11587.0 -1 0 127 738.8568721424429 2951.398382703371 4 739.3572265505791 MULTI CID FTMS 0 0 0 13974 204743.609375 1.0 0 0.0 20 3 Q{I|L}{M(Oxidation (M))|F}G 4 -1 21.938 0.0 0.0 0.74332 0.0 0.0 1160.5235994002353 1342.6185790014565 2503.142178401692 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L}{M(Oxidation (M))|F}G 0.74332 - 1092 + 1 1.057 77083.9 1.0 8466 5526 13974 HBL1_DMSO_200M_050219_1,13994 HBL1_DMSO_200M_050219_1,13994, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 13996 69.653 123.0 1005700.0 25 0 218820.0 + 32003 RVIDLRAEL 9 106 542.8283574761181 1083.642162019036 2 542.8278686404228 MULTI CID FTMS 0 0 0 13995 368551.25 0.2786652354767126 1 -0.0431060791015625 1 Unmodified _RVIDLRAEL_ ENSG00000130254|ENST00000252542|SAFB2;ENSG00000160633|ENST00000588852|SAFB;ENST00000586934.5_1_19:5623180-5651054:+|nuORF;nc|ENSG00000130254|Q14151-2|SAFB2;nc|ENSG00000160633|Q15424-2|SAFB;nc|ENSG00000160633|Q15424-4|SAFB;nc|ENSG00000160633|Q15424|SAFB 27.22323531849824 0.1848086127304535 3 [VG]V{I|L}D{I|L}M[KP]{I|L} 10 5 + 45.745 0.0 0.0 4.2214 4.2214 80.61 0.0 0.0 0.0 32.981027278271306 2.218487496163561 2.218487496163561 8.573617258374483 0 1.2134679910804405 1.0457574905606752 0.0 0.0 [VG]V{I|L}D{I|L}M[KP]{I|L};{I|L}AA{I|L}D{I|L}M[KP]{I|L};{I|L}[RV]D{I|L}M[KP]{I|L} 4.2214;3.4302;3.1052 -;-;- 126 + 1 1.081 99487.2 1.0 8467 5527 13995 HBL1_DMSO_200M_050219_1,13996 HBL1_DMSO_200M_050219_1,13996,RVIDLRAEL False True RVIDLRAEL 69.652687 542.827868640423 20288598.0 13995.0 nc|ENSG00000160633|Q15424-2|SAFB;;nc|ENSG00000160633|Q15424|SAFB;;ENST00000586934.5_1_19:5623180-5651054:+|nuORF;;ENSG00000130254|ENST00000252542|SAFB2;;ENSG00000160633|ENST00000588852|SAFB;;nc|ENSG00000160633|Q15424-4|SAFB;;nc|ENSG00000130254|Q14151-2|SAFB2 6.408851782480876 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13997 69.655 129.0 794170.0 25 0 62790.0 + 4953 DGPIAEVHI 9 125 475.7502148265223 949.4858767198446 2 475.7504760622978 MULTI CID FTMS 0 0 0 13995 369377.25 0.4533367800014497 -1 0.1255340576171875 2 Unmodified _DGPIAEVHI_ ENSG00000197299|ENST00000355112|BLM 48.345845343767074 0.0439967357579942 3 [DG]P{I|L}AEVH{I|L} 9 0 + 64.72 0.0 0.0 6.8163 6.8163 87.58 0.0 0.0 0.0 17.147642715192504 6.585413472804106 6.585413472804106 6.585413472804106 0 0.5356668758921829 1.0 0.7302046884880937 0.0 + + [DG]P{I|L}AEVH{I|L};[DG]P{I|L}AEV{I|L}H;[DG]P{I|L}AE[H{I|L}]V;[DG]P{I|L}{I|L}{[DA]|[EG]}H{I|L};[{I|L}P]GSAAA{I|L}[HN];[DG]P{I|L}{I|L}{[DA]|[EG]}{I|L}H;[DG]P{I|L}A[YT]T{I|L};[{I|L}P]G[QT]A{I|L}[HN];[{I|L}P]GS{[NV]|[RG]}{I|L}[HN];[PG]TVAAA{I|L}[HN] 6.8163;6.1228;5.344;4.4975;4.123;3.804;3.7966;3.4902;3.384;2.4037 +;-;-;-;-;-;-;-;-;- + 595 + 1 1.081 84613.6 1.0 8468 5527 13995 HBL1_DMSO_200M_050219_1,13997 HBL1_DMSO_200M_050219_1,13997,DGPIAEVHI True True DGPIAEVHI 69.655317 475.750476062298 7162006.5 13995.0 ENSG00000197299|ENST00000355112|BLM 4.943520387013753 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13998 69.656 28.0 1640300.0 25 0 140250.0 10591 FVKHFTSSA 9 71 512.2657609122214 1022.5169688912428 2 512.2655517458916 MULTI CID FTMS 0 0 0 13995 1309911.5 0.3990229369920015 -4 0.3933486938476562 3 Unmodified _FVKHFTSSA_ ENSG00000164074|ENST00000645843|ABHD18;ENST00000473040.6_1_4:128905516-128956965:+|nuORF;nc|ENSG00000164074|Q0P651-2|ABHD18;nc|ENSG00000164074|Q0P651-3|ABHD18;nc|ENSG00000164074|Q0P651-4|ABHD18;nc|ENSG00000164074|Q0P651|ABHD18 20.453626601364224 0.2830276176381075 3 SSA 3 6 26.163 0.0 0.0 2.5587 0.0 0.0 759.4050436976864 0.0 759.4050436976864 0.0 9.736811325323329 0.0 0.0 0 0.4247425010840047 0.0 0.7134679910804405 0.0 + SSA 2.5587 + + 35 + 1 1.081 42272.6 1.0 8469 5527 13995 HBL1_DMSO_200M_050219_1,13998 HBL1_DMSO_200M_050219_1,13998,FVKHFTSSA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 13999 69.658 23.0 1849500.0 25 0 80002.0 + 29389 QLAQFVHEV 9 81 535.784200913871 1069.553848894542 2 535.7845336794853 MULTI CID FTMS 0 0 0 13995 1323253.125 0.4845752455782727 1 -0.0431060791015625 4 Unmodified _QLAQFVHEV_ ENSG00000013573|ENST00000542838|DDX11;ENST00000535158.5_1_12:31227017-31242187:+|nuORF;ENST00000536265.5_1_12:31227017-31242486:+|nuORF;ENST00000539757.1_1_12:9440801-9462940:+|nuORF;ENST00000542242.1_1_12:31240692-31242486:+|nuORF;ENST00000542244.5_1_12:31237807-31242486:+|nuORF;ENST00000543026.5_1_12:31240692-31242187:+|nuORF;nc|ENSG00000013573|Q96FC9-3|DDX11;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000013573|Q96FC9|DDX11;nc|ENSG00000214826|Q92771|DDX12P;nc|ENSG00000256263|A8MPP1|DDX11L8 37.97399986684836 0.0865783450051559 3 [Q{I|L}]AQEVH[{M(Oxidation (M))|F}V] 9 2 + 47.13 0.0 0.0 4.4065 4.4065 85.115 0.0 0.0 0.0 10.743398883557518 34.45432175029467 10.743398883557518 18.27445478875485 0 0.7429928190999391 2.0 0.0 0.6109243748081782 [Q{I|L}]AQEVH[{M(Oxidation (M))|F}V];[Q{I|L}]C(Carbamidomethyl (C))V[Y{M(Oxidation (M))|F}][K{I|L}];[QA]{I|L}QEVH[{M(Oxidation (M))|F}V];[AG]A{I|L}QEVH[{M(Oxidation (M))|F}V];[AG]{I|L}AQEVH[{M(Oxidation (M))|F}V];[AG]A[PS]V[VS]H[{M(Oxidation (M))|F}V];[Q{I|L}][DP][KS]H[{M(Oxidation (M))|F}V];[Q{I|L}][CG]V[Y{M(Oxidation (M))|F}][K{I|L}];[QA][PS]V[VS]H[{M(Oxidation (M))|F}V];[YT]HV[Y{M(Oxidation (M))|F}][K{I|L}] 4.4065;2.6979;2.6267;2.4317;2.3828;1.9559;1.9093;1.832;1.7909;0.86502 -;-;-;-;-;-;-;-;-;- 346 1 1.081 39906.1 1.0 8470 5527 13995 HBL1_DMSO_200M_050219_1,13999 HBL1_DMSO_200M_050219_1,13999,QLAQFVHEV True True QLAQFVHEV 69.657675 535.784533679485 18229946.0 13995.0 ENST00000535158.5_1_12:31227017-31242187:+|nuORF;;ENST00000536265.5_1_12:31227017-31242486:+|nuORF;;nc|ENSG00000013573|Q96FC9|DDX11;;nc|ENSG00000013573|Q96FC9-4|DDX11;;nc|ENSG00000214826|Q92771|DDX12P;;ENST00000542244.5_1_12:31237807-31242486:+|nuORF;;ENST00000539757.1_1_12:9440801-9462940:+|nuORF;;ENSG00000013573|ENST00000542838|DDX11;;nc|ENSG00000256263|A8MPP1|DDX11L8;;ENST00000542242.1_1_12:31240692-31242486:+|nuORF;;nc|ENSG00000013573|Q96FC9-3|DDX11;;ENST00000543026.5_1_12:31240692-31242187:+|nuORF 8.0666716893514 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14000 69.659 38.0 1938400.0 25 0 203440.0 + -1 VTMFTDLY 8 85 503.2318295443582 1004.4491061555163 2 503.2321960330009 MULTI CID FTMS 0 0 0 13995 882109.3125 0.0342775157219873 12 -1.0873641967773438 5 Oxidation (M) _VTM(Oxidation (M))FTDLY_ REV__ENSG00000049246|ENST00000377532|PER3;REV__nc|ENSG00000049246|P56645|PER3 13.50788311687929 0.7113601687236069 3 V{M(Oxidation (M))|F} 2 -1 31.594 0.0 0.0 3.1454 0.0 0.0 0.0 755.305366208727 755.305366208727 20.17381053129606 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 V{M(Oxidation (M))|F} 3.1454 - 66 + 1 1.081 60821.1 1.0 8471 5527 13995 HBL1_DMSO_200M_050219_1,14000 HBL1_DMSO_200M_050219_1,14000,VTMFTDLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14001 69.663 218.0 646580.0 25 0 105250.0 + 6301 DVGGAQNG 8 121 359.16023042388304 716.3059079145661 2 359.1600829958916 MULTI CID FTMS 0 0 0 13995 636104.5625 1.0 0 0.0 6 Unmodified _DVGGAQNG_ REV__ENSG00000112936|ENST00000313164|C7 5.230669730166228 0.792582437072536 3 DV 2 -1 29.553 0.0 0.0 4.1257 0.0 0.0 0.0 499.1891878717407 499.1891878717407 8.046818444009169 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 DV 4.1257 + + 33 + 1 1.081 114414.7 1.0 8472 5527 13995 HBL1_DMSO_200M_050219_1,14001 HBL1_DMSO_200M_050219_1,14001,DVGGAQNG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14002 69.672 535.0 349140.0 25 0 18696.0 + 16895 KIIDETMAQL 10 178 581.3122252688712 1160.6098976045423 2 581.3138915896416 MULTI CID FTMS 0 0 0 13995 276157.21875 0.1838184539851002 -3 0.2512283325195312 7 Unmodified _KIIDETMAQL_ ENSG00000072501|ENST00000322213|SMC1A 65.47368725323818 0.0222277162070287 3 {I|L}{I|L}KDETMAQ{I|L} 10 2 + 85.922 0.0 0.0 7.4032 7.4032 87.943 0.0 0.0 0.0 5.291502547236732 16.53212513775344 5.291502547236732 5.291502547236732 0 0.7614393726401688 0.6989700043360187 2.0356668758921828 0.5 {I|L}{I|L}KDETMAQ{I|L};[K{I|L}]{I|L}DETMAQ{I|L};{[QN]|[E{I|L}]|[KN]}AE{M(Oxidation (M))|F}{I|L}KAQ{I|L};{I|L}{I|L}KDETMA[AG]{I|L};[K{I|L}]{I|L}DETMA[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]ETMAQ{I|L};{[QN]|[E{I|L}]|[KN]}AE{M(Oxidation (M))|F}{I|L}KA[AG]{I|L};{I|L}{I|L}KDER{M(Oxidation (M))|F}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AMTEP{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}AE{M(Oxidation (M))|F}AK{I|L}Q{I|L} 7.4032;6.9473;6.693;6.6135;6.1576;6.0698;5.9033;5.8491;5.7758;5.578 -;+;-;-;-;-;-;-;-;- + 2592 1 1.081 140142.0 1.0 8473 5527 13995 HBL1_DMSO_200M_050219_1,14002 HBL1_DMSO_200M_050219_1,14002,KIIDETMAQL True True KIIDETMAQL 69.672381 581.313891589642 27071900.0 13995.0 ENSG00000072501|ENST00000322213|SMC1A 5.445565700531006 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14003 69.686 775.0 552650.0 25 0 60277.0 + 43937 YGIPRLEKI 9 264 363.5539892584151 1087.6401383754453 3 363.5532409548759 MULTI CID FTMS 0 0 0 13995 252481.28125 0.5620369981326189 1 -0.0431060791015625 8 Unmodified _YGIPRLEKI_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 35.61225514009592 0.0995432151795903 3 YG{I|L}{I|L}{[RE]|[WV]}PK{I|L} 9 3 + 61.113 0.0 0.0 5.6188 5.6188 83.702 0.0 0.0 0.0 44.235031987534704 4.244079133909381 4.244079133909381 6.575773191777934 0 0.6549471895720985 0.958607314841775 0.7887254899964358 0.9957416651753048 YG{I|L}{I|L}{[RE]|[WV]}PK{I|L};Y{I|L}G{I|L}{[RE]|[WV]}PK{I|L};YG{I|L}{I|L}{[RE]|[WV]}P{I|L}K;Y{I|L}G{I|L}{[RE]|[WV]}P{I|L}K;YG{I|L}{I|L}{[RE]|[WV]}{I|L}PK;{I|L}YG{I|L}{[RE]|[WV]}PK{I|L};YG{I|L}{I|L}K[RN]PK;Y{I|L}G{I|L}{[RE]|[WV]}{I|L}PK;{I|L}YG{I|L}{[RE]|[WV]}P{I|L}K;{[VA]|[{I|L}G]}[RP]{I|L}A{M(Oxidation (M))|F}{I|L}TT 5.6188;5.0142;4.9858;4.3812;4.0913;3.9775;3.5086;3.4867;3.3444;2.6969 -;-;-;-;-;-;-;-;-;- 1003 + 1 1.081 336827.1 1.0 8474 5527 13995 HBL1_DMSO_200M_050219_1,14003 HBL1_DMSO_200M_050219_1,14003,YGIPRLEKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14004 69.69 210.0 344870.0 25 0 22019.0 + 36191 SVVSPSSFENV 11 131 576.281901475813 1150.549250018426 2 576.2820312380791 MULTI CID FTMS 0 0 0 13995 221478.125 0.0457754349509193 -4 0.3933486938476562 9 Unmodified _SVVSPSSFENV_ ENSG00000070831|ENST00000656825|CDC42;nc|ENSG00000289694|P60953-1|CDC42 28.49450938151212 0.4231428536161201 3 [VS]VS 4 7 40.49 0.0 0.0 3.5192 0.0 0.0 0.0 775.3247376495384 775.3247376495384 26.08726483989301 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 + [VS]VS 3.5192 + + 348 1 1.081 62368.1 1.0 8475 5527 13995 HBL1_DMSO_200M_050219_1,14004 HBL1_DMSO_200M_050219_1,14004,SVVSPSSFENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14006 69.694 18.0 3715100.0 25 0 609310.0 41762 VPVANKRDT 9 85 500.2833317178364 998.5521105024728 2 500.2830993533134 MULTI CID FTMS 0 0 0 14005 3824789.75 0.7666395739053614 7 -0.707000732421875 1 Unmodified _VPVANKRDT_ ENSG00000091640|ENST00000206020|SPAG7;ENST00000575142.5_1_17:4862831-4862993:-|nuORF 4.3292370932331545 0.7635526921153418 3 {I|L} 1 9 9.0908 0.0 0.0 0.9104 0.0 0.0 867.4570615296196 0.0 867.4570615296196 0.0 9.090782060276135 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.9104 - 7 + 1 1.081 55457.5 1.0 8476 5528 14005 HBL1_DMSO_200M_050219_1,14006 HBL1_DMSO_200M_050219_1,14006,VPVANKRDT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14007 69.695 17.0 1609800.0 25 0 112250.0 + 43622 YAKKQPPLS 9 61 516.2968084034844 1030.5790638737687 2 516.2962524294853 MULTI CID FTMS 0 0 0 14005 3504697.0 0.7837193661946241 2 -0.1652374267578125 2 Unmodified _YAKKQPPLS_ REV__ENSG00000106479|ENST00000223210|ZNF862 4.3292370932331545 0.7635526921153418 3 {I|L} 1 -1 10.713 0.0 0.0 1.0395 0.0 0.0 899.4842895591188 0.0 899.4842895591188 0.0 -12.474250108400469 -12.474250108400469 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0395 + + 17 + 1 1.081 27563.5 1.0 8477 5528 14005 HBL1_DMSO_200M_050219_1,14007 HBL1_DMSO_200M_050219_1,14007,YAKKQPPLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14008 69.697 27.0 2592900.0 25 0 227840.0 + 31422 RPLTMAVL 8 80 450.76995447169656 899.5253560101931 2 450.7704345583916 MULTI CID FTMS 0 0 0 14005 3184627.75 0.5149903563454471 3 -0.3063583374023437 3 Unmodified _RPLTMAVL_ nc|ENSG00000269565|Q8NGA4|GPR32P1 20.453626601364224 0.6087503291685402 3 MA 2 6 40.445 0.0 0.0 4.4963 0.0 0.0 0.0 694.4267058037004 694.4267058037004 1.7680904563547983 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + MA 4.4963 + + 109 + 1 1.081 60694.4 1.0 8478 5528 14005 HBL1_DMSO_200M_050219_1,14008 HBL1_DMSO_200M_050219_1,14008,RPLTMAVL False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14009 69.698 21.0 2916200.0 25 0 457390.0 -1 FVKFCHFL 8 95 549.2852363066577 1096.5559196801153 2 549.2858154177666 MULTI CID FTMS 0 0 0 14005 2801314.5 0.256275717322202 5 -0.5330886840820312 4 Carbamidomethyl (C) _FVKFC(Carbamidomethyl (C))HFL_ ENSG00000106479|ENST00000223210|ZNF862 36.46614268402704 0.2934124525509074 3 [DV]AY[RD]V{M(Oxidation (M))|F}{I|L} 9 -1 + 53.338 0.0 0.0 4.8641 4.8641 78.583 0.0 0.0 0.0 14.093020841151612 37.140012553530966 14.093020841151612 4.247425010840047 0 0.5 1.6989700043360187 0.0 0.8494850021680094 [DV]AY[RD]V{M(Oxidation (M))|F}{I|L};[DV]AYN[KQ]{M(Oxidation (M))|F}{I|L};[DV]AYT{[VA]|[{I|L}G]}V{M(Oxidation (M))|F}{I|L};[DV]AYGG[KQ]{M(Oxidation (M))|F}{I|L};[KA]YQ[DN]V{M(Oxidation (M))|F}{I|L};[YV]{[DA]|[EG]}[RD]V{M(Oxidation (M))|F}{I|L};[YV]{[DA]|[EG]}N[KQ]{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DN]V{M(Oxidation (M))|F}{I|L};[YV]{[DA]|[EG]}T{[VA]|[{I|L}G]}V{M(Oxidation (M))|F}{I|L};[DV]AYT{I|L}{I|L}[CS]{I|L} 4.8641;4.4768;3.9755;3.6371;3.1629;2.8897;2.5023;2.3245;2.0011;1.649 -;-;-;-;-;-;-;-;-;- 386 1 1.081 53750.2 1.0 8479 5528 14005 HBL1_DMSO_200M_050219_1,14009 HBL1_DMSO_200M_050219_1,14009,FVKFCHFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14010 69.703 264.0 450890.0 25 0 54267.0 -1 0 162 340.18670105060943 678.3588491680189 2 340.1865417361259 MULTI CID FTMS 0 0 0 14005 1108003.875 1.0 0 0.0 5 3 [DV]V 3 -1 15.15 0.0 0.0 2.2334 0.0 0.0 0.0 362.1717943969259 362.1717943969259 1.655462488490688 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [DV]V 2.2334 - 16 1 1.081 95942.7 1.0 8480 5528 14005 HBL1_DMSO_200M_050219_1,14010 HBL1_DMSO_200M_050219_1,14010, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14011 69.709 336.0 218820.0 25 0 19957.0 + 40071 VGHAKAHL 8 128 416.7425237238557 831.4704945145114 2 416.7423583865166 MULTI CID FTMS 0 0 0 14005 835542.4375 1.0 0 0.0 6 Unmodified _VGHAKAHL_ REV__ENSG00000141401|ENST00000269159|IMPA2;REV__nc|ENSG00000141401|O14732-2|IMPA2 2.889219685676258 0.8067950007271085 3 {[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}[VG]K{I|L} 8 -1 {[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}[VG]K + + 11.594 1.6535 0.23609 1.3944 1.3944 48.491 0.0 0.0 0.0 0.0 -9.3753063169585 -9.3753063169585 0.0 0 0.0 0.0 0.0 0.0 {[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}[VG]K{I|L} 1.3944 - 49 + 1 1.081 67273.9 1.0 8481 5528 14005 HBL1_DMSO_200M_050219_1,14011 HBL1_DMSO_200M_050219_1,14011,VGHAKAHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14012 69.712 153.0 1533700.0 25 0 106690.0 + -1 PLWVDMCT 8 200 519.2251825101737 1036.4358120871473 2 519.2258178591728 MULTI CID FTMS 0 0 0 14005 683973.75 0.5745945734222379 -3 0.1965789794921875 7 Carbamidomethyl (C),Oxidation (M) _PLWVDM(Oxidation (M))C(Carbamidomethyl (C))T_ REV__ENST00000524585.1_1_11:64781679-64786448:+|nuORF 14.581692164780916 0.6954967302934248 3 {I|L}{I|L}W[DP] 5 -1 21.739 0.0 0.0 2.0975 0.0 0.0 394.093662284216 0.0 394.093662284216 0.0 5.065340550185514 0.0 0.0 0 0.4247425010840047 0.0 0.3054621874040891 0.0 {I|L}{I|L}W[DP] 2.0975 - 811 + 1 1.081 180425.9 1.0 8482 5528 14005 HBL1_DMSO_200M_050219_1,14012 HBL1_DMSO_200M_050219_1,14012,PLWVDMCT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14013 69.714 88.0 540770.0 25 0 71892.0 + 37015 TFQDKTLNF 9 77 557.281632281592 1112.548711629984 2 557.2816039919853 MULTI CID FTMS 0 0 0 14005 538757.125 1.0 0 0.0 8 Unmodified _TFQDKTLNF_ ENSG00000183742|ENST00000400331|MACC1 36.506200033944 0.094635877243972 3 [KA][HS]V[DV]PN{M(Oxidation (M))|F} 10 8 [KA][HS]V[DV]P + + 16.44 -8.6003 -1.0319 1.4777 1.4777 48.517 0.0 0.0 0.0 0.0 0.2692501919536703 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 [KA][HS]V[DV]PN{M(Oxidation (M))|F} 1.4777 - 179 + 1 1.081 47132.4 1.0 8483 5528 14005 HBL1_DMSO_200M_050219_1,14013 HBL1_DMSO_200M_050219_1,14013,TFQDKTLNF True True TFQDKTLNF 69.713708 557.281603991985 4655608.0 14005.0 ENSG00000183742|ENST00000400331|MACC1 5.417550563812256 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14014 69.722 457.0 366100.0 25 0 52214.0 -1 0 109 930.9444661372228 1859.8743793412448 2 931.4459106326104 MULTI CID FTMS 0 0 0 14005 424412.625 0.8659521600658014 2 -0.1652374267578125 9 3 [QP]SQD 5 -1 17.435 0.0 0.0 0.93743 0.0 0.0 0.0 1301.632838163764 1301.632838163764 0.8768453136694099 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 [QP]SQD 0.93743 - 2986 1 1.081 110443.6 1.0 8484 5528 14005 HBL1_DMSO_200M_050219_1,14014 HBL1_DMSO_200M_050219_1,14014, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14015 69.726 194.0 681800.0 25 0 47961.0 + 24817 MPKIKMPKI 9 127 362.5571424720684 1084.6495980164052 3 362.5567199587822 MULTI CID FTMS 0 0 0 14005 423164.40625 1.0 0 0.0 10 Unmodified _MPKIKMPKI_ ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK 30.7034409873982 0.1405282614900322 3 MPK{I|L}KMPK{I|L} 9 0 + 54.042 0.0 0.0 4.9825 4.9825 86.603 0.0 0.0 0.0 40.06306120672178 0.8312981284343195 0.8312981284343195 15.740312677277188 0 0.9531198197908842 0.0 0.0 0.0 + + MPK{I|L}KMPK{I|L};MPK{I|L}KM{I|L}[KP];M[KA]{I|L}{[RE]|[WV]}PK{I|L};M[KA]{I|L}{[RE]|[WV]}{I|L}[KP];[RV]{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}][WK] 4.9825;3.5313;3.1916;1.7405;0.10072 +;-;-;-;- + 481 + 1 1.081 110395.4 1.0 8485 5528 14005 HBL1_DMSO_200M_050219_1,14015 HBL1_DMSO_200M_050219_1,14015,MPKIKMPKI False True MPKIKMPKI 69.725556 362.556719958782 37155508.0 14005.0 ENSG00000124942|ENST00000378024|AHNAK 3.3315102656682334 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14016 69.735 518.0 234710.0 25 0 28332.0 + 4474 DAYALNHTLSV 11 165 602.3037908596431 1202.593028786086 2 602.3040038943291 MULTI CID FTMS 0 0 0 14005 321544.46875 0.0236265360911007 7 -0.707000732421875 11 Unmodified _DAYALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 77.04852534044906 0.0119778990295177 3 [HN]T{I|L}A{I|L}YWW 9 10 + 54.56 0.0 0.0 4.5368 4.5368 72.382 0.0 0.0 0.0 4.81486060122112 10.909266471209492 4.81486060122112 0.9370405245622492 0 0.0 0.6575773191777937 2.0693415193665468 0.0 [HN]T{I|L}A{I|L}YWW;[HN]T{I|L}AYW{I|L}W;[HN]T{I|L}AY{I|L}WW;[HN]{I|L}TA{I|L}YWW;[HT]N{I|L}A{I|L}YWW;[HN]{I|L}TAYW{I|L}W;[HT]N{I|L}AYW{I|L}W;[HN]{I|L}TAY{I|L}WW;{[SA]|[TG]}GH{I|L}A{I|L}YWW;[HT]N{I|L}AY{I|L}WW 4.5368;4.4589;4.2664;4.1873;4.1364;4.1094;4.0585;3.9168;3.8729;3.866 -;-;-;-;-;-;-;-;-;- 7919 1 1.081 88056.4 1.0 8486 5528 14005 HBL1_DMSO_200M_050219_1,14016 HBL1_DMSO_200M_050219_1,14016,DAYALNHTLSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14017 69.746 676.0 366310.0 25 0 16650.0 + 30797 RIFKDFMHV 9 239 398.2146718170594 1191.6221860513783 3 398.2146789431572 MULTI CID FTMS 0 0 0 14005 302224.8125 1.0 0 0.0 12 Unmodified _RIFKDFMHV_ ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A 84.5221896805406 0.0164210731287474 3 [R{I|L}]{M(Oxidation (M))|F}KD{M(Oxidation (M))|F}MHV 9 0 + 88.705 0.0 0.0 7.444 7.444 94.935 0.0 0.0 0.0 18.0793946944482 69.65350013324773 18.0793946944482 20.65202202974472 0 2.177825934852436 1.5228787452803376 0.6549471895720985 1.0356668758921828 + + [R{I|L}]{M(Oxidation (M))|F}KD{M(Oxidation (M))|F}MHV;VAQS{M(Oxidation (M))|F}DKVVTV;VAQS{M(Oxidation (M))|F}DKVVS{I|L};[R{I|L}]{M(Oxidation (M))|F}KD{[ET]|[MV]}{[QG]|[NA]}V;[R{I|L}]{M(Oxidation (M))|F}KD{[ES]|[DT]|[{I|L}C]}[QA]V;[R{I|L}]Q[YV]{M(Oxidation (M))|F}MHV;[R{I|L}]{M(Oxidation (M))|F}KD{[RE]|[WV]}[QT];VAC(Carbamidomethyl (C))KEP[RP]HV;V[NG]D{M(Oxidation (M))|F}DKVVTV;[R{I|L}]{M(Oxidation (M))|F}K[MN]{[RE]|[WV]}V 7.444;5.7109;5.2205;5.0759;4.7419;4.3047;4.2414;4.2094;3.9074;3.6478 +;-;-;-;-;-;-;-;-;- + 2799 1 1.081 195198.5 1.0 8487 5528 14005 HBL1_DMSO_200M_050219_1,14017 HBL1_DMSO_200M_050219_1,14017,RIFKDFMHV True True RIFKDFMHV 69.746425 398.214678943157 3721968.75 14005.0 nc|ENSG00000196504|O75400-3|PRPF40A;;ENSG00000196504|ENST00000545856|PRPF40A;;nc|ENSG00000196504|O75400|PRPF40A;;nc|ENSG00000196504|O75400-2|PRPF40A 8.69781494140625 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14018 69.756 541.0 397720.0 25 0 116100.0 + -1 AQLPDPPTI 9 113 951.5159796564564 0 951.5173217654228 PEAK CID FTMS 0 0 0 14005 308512.53125 0.5157066843047348 -4 0.2943344116210937 13 ENSG00000153066|ENST00000283033|TXNDC11;ENST00000572732.1_1_16:11785059-11785929:-|nuORF;nc|ENSG00000153066|Q6PKC3|TXNDC11 3 VT{I|L}P[QT]{I|L} 7 -1 38.919 0.0 0.0 2.0473 0.0 0.0 949.4811647799066 196.0733126276 1145.5544774075067 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9802046884880936 1.4916440611282626 VT{I|L}P[QT]{I|L} 2.0473 - 1047 + 1 1.081 141152.9 1.0 8488 5528 14005 HBL1_DMSO_200M_050219_1,14018 HBL1_DMSO_200M_050219_1,14018, False False AQLPDPPTI 69.755958 951.517321765423 8255538.5 14005.0 ENSG00000153066|ENST00000283033|TXNDC11;;ENST00000572732.1_1_16:11785059-11785929:-|nuORF;;nc|ENSG00000153066|Q6PKC3|TXNDC11 8.109963258107504 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14019 69.767 658.0 316860.0 25 0 28455.0 + 10497 FTVNGTGGAV 10 219 461.73479636979374 921.4550398063876 2 461.7350036501884 MULTI CID FTMS 0 0 0 14005 283535.875 1.0 0 0.0 14 Unmodified _FTVNGTGGAV_ REV__ENSG00000132704|ENST00000361516|FCRL2;REV__ENST00000368178.3_1_1:157738198-157738513:-|nuORF 14.838274106304384 0.5985701837916485 3 [DP]AP[RH]MV 8 -1 + 21.396 0.0 0.0 2.322 2.322 69.133 0.0 0.0 0.0 8.297509876729716 6.910772804864038 6.910772804864038 1.927579072128008 0 0.0629529932484498 0.1549019599857432 0.0 0.3054621874040891 [DP]AP[RH]MV;[DP]AVP{[HG]|PP}MV;[DP]AV[YK]MV;[DP]APV{[HG]|PP}MV;[DP]A[YK]VMV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[YK]A{[HG]|PP};[DP]AP{[HG]|PP}VMV;[VP]AHHPA{[HG]|PP};[DP]APV[NP]NV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[HG]|PP}PA{[HG]|PP} 2.322;2.1128;2.0632;2.0402;1.9276;1.7345;1.7135;1.681;1.6166;1.5204 -;-;-;-;-;-;-;-;-;- 726 + 1 1.081 159628.9 1.0 8489 5528 14005 HBL1_DMSO_200M_050219_1,14019 HBL1_DMSO_200M_050219_1,14019,FTVNGTGGAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14020 69.781 714.0 457990.0 25 0 29299.0 + 28918 QAPPVLEV 8 264 426.7456052496411 851.4766575660822 2 426.7452270388603 MULTI CID FTMS 0 0 0 14005 267458.625 0.9370217411725138 -3 0.1965789794921875 15 Unmodified _QAPPVLEV_ ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1 36.04419817259434 0.3004715606373109 3 {[QN]|[E{I|L}]|[KN]}[H{I|L}]{I|L}EV 7 4 + 29.121 0.0 0.0 3.42 3.42 67.91 0.0 0.0 0.0 0.1399068170437623 9.520082085180944 0.1399068170437623 0.1399068170437623 0 0.8539171939081174 0.958607314841775 0.3054621874040891 0.6146051890133548 {[QN]|[E{I|L}]|[KN]}[H{I|L}]{I|L}EV;[VP]PAQ{I|L}EV;[VP]P{I|L}QAEV;{[HG]|PP}VAQ{I|L}EV;[VP]PAAG{I|L}EV;{[HG]|PP}V{I|L}QAEV;[VP]{I|L}PQAEV;[{I|L}P]VPQAEV;[{I|L}P]QPG{I|L}EV;[VP]PAAVAEV 3.42;3.4036;3.11;2.4269;2.2446;2.1333;1.9355;1.7639;1.704;1.6843 -;-;-;-;-;-;-;-;-;- 406 1 1.081 251680.5 1.0 8490 5528 14005 HBL1_DMSO_200M_050219_1,14020 HBL1_DMSO_200M_050219_1,14020,QAPPVLEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14021 69.793 653.0 190000.0 25 0 15394.0 + 17804 KQLDAENLEL 10 174 586.8113669884601 1171.6081810437202 2 586.8117553591728 MULTI CID FTMS 0 0 0 14005 226722.640625 0.4648624482484982 4 -0.3618927001953125 16 Unmodified _KQLDAENLEL_ ENSG00000015133|ENST00000389857|CCDC88C 30.7034409873982 0.2788461460996952 3 {[QN]|[E{I|L}]|[KN]}NKAEN{I|L}E{I|L} 10 3 + 73.441 0.0 0.0 6.2684 6.2684 82.618 0.0 0.0 0.0 3.636119798921456 9.27440017027358 3.636119798921456 3.636119798921456 0 0.2302046884880938 1.0969100130080565 0.0 0.805462187404089 {[QN]|[E{I|L}]|[KN]}NKAEN{I|L}E{I|L};[VS]VAQAEN{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NKAEGG{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}GGKAEN{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKAEN{I|L}E{I|L};[{I|L}T]AAQAEN{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQAEN{I|L}E{I|L};[VS]VA[AG]AEN{I|L}E{I|L};[VS]VAQAEGG{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EKAEN{I|L}E{I|L} 6.2684;5.9581;5.4862;5.4862;5.4539;5.3081;5.2465;5.1789;5.1789;5.1333 -;-;-;-;-;-;-;-;-;- 3481 1 1.081 97378.0 1.0 8491 5528 14005 HBL1_DMSO_200M_050219_1,14021 HBL1_DMSO_200M_050219_1,14021,KQLDAENLEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14022 69.797 216.0 381030.0 25 0 82116.0 + 38819 TVFTDHMLTV 10 115 590.2892877063944 1178.5640224795886 2 590.2889892458916 MULTI CID FTMS 0 0 0 14005 215380.359375 0.2444117384221154 -3 0.1965789794921875 17 Oxidation (M) _TVFTDHM(Oxidation (M))LTV_ ENSG00000060982|ENST00000261192|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;nc|ENSG00000060982|P54687-5|BCAT1 47.74868867922204 0.0933642699623533 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[WD]NVTV 10 4 + 46.633 0.0 0.0 3.9568 3.9568 75.428 0.0 0.0 0.0 4.35428375548895 3.853508813640176 3.853508813640176 3.853508813640176 0 1.1237125054200234 2.0 1.372363747448347 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[WD]NVTV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[WD]NVS{I|L};[{M(Oxidation (M))|F}T]DH{M(Oxidation (M))|F}{I|L}TV{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}EE{M(Oxidation (M))|F}{I|L}TV{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}V]AYC{I|L}TY{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}V]ACY{I|L}TY{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}T]DH{M(Oxidation (M))|F}{I|L}S{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VYY{[SA]|[TG]}MV;[{M(Oxidation (M))|F}V]ACY{I|L}TV[YT];[{M(Oxidation (M))|F}V]AYC{I|L}TV[YT] 3.9568;3.6298;3.5644;2.9634;2.9141;2.9141;2.6785;2.2371;2.2091;2.2091 -;-;-;-;-;-;-;-;-;- 1121 + 1 1.081 66906.2 1.0 8492 5528 14005 HBL1_DMSO_200M_050219_1,14022 HBL1_DMSO_200M_050219_1,14022,TVFTDHMLTV True False TVFTDHMLTV 69.796739 590.288989245892 0.0 14005.0 nc|ENSG00000060982|P54687-2|BCAT1;;nc|ENSG00000060982|P54687-4|BCAT1;;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;;nc|ENSG00000060982|P54687-5|BCAT1;;nc|ENSG00000060982|P54687-3|BCAT1;;ENSG00000060982|ENST00000261192|BCAT1 6.681825160980225 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14023 69.81 712.0 502950.0 25 0 32079.0 + 28384 PSNYDLCESSI 11 227 614.2655106968764 1226.5164684605527 2 614.2671996951103 MULTI CID FTMS 0 0 0 14005 173077.71875 0.6210811019328973 2 -0.1652374267578125 18 Unmodified _PSNYDLCESSI_ REV__ENSG00000257594|ENST00000529983|GALNT4;REV__ENST00000547474.1_3_12:89916592-89919989:-|nuORF;REV__nc|ENSG00000257594|Q8N4A0-2|GALNT4 15.248480904072842 0.7179608125786238 3 TGVHEA{I|L}EMR 10 -1 55.813 0.0 0.0 4.5505 0.0 0.0 84.96091485386599 0.0 84.96091485386599 0.0 19.185215844767846 0.0 0.0 0 0.0 0.0 0.0 0.4947026752325155 TGVHEA{I|L}EMR 4.5505 - 9342 + 1 1.081 258724.8 1.0 8493 5528 14005 HBL1_DMSO_200M_050219_1,14023 HBL1_DMSO_200M_050219_1,14023,PSNYDLCESSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14024 69.812 59.0 548980.0 25 0 25753.0 + 17130 KLHEYFPEM 9 81 597.2868169635078 1192.5590809938155 2 597.2882568240166 MULTI CID FTMS 0 0 0 14005 192832.265625 0.048911893265372 -3 0.1965789794921875 19 Unmodified _KLHEYFPEM_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 29.081581746732265 0.1611639662936252 3 {[VA]|[{I|L}G]}{[WT]|[RM]}{[NV]|[RG]}{M(Oxidation (M))|F}PEM 10 5 {[VA]|[{I|L}G]}{[WT]|[RM]}{[NV]|[RG]}{M(Oxidation (M))|F} + + 28.874 16.509 2.0196 2.4212 2.4212 49.286 0.0 0.0 0.0 0.0 1.4266750356873177 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.0 {[VA]|[{I|L}G]}{[WT]|[RM]}{[NV]|[RG]}{M(Oxidation (M))|F}PEM 2.4212 - 73 + 1 1.081 30344.4 1.0 8494 5528 14005 HBL1_DMSO_200M_050219_1,14024 HBL1_DMSO_200M_050219_1,14024,KLHEYFPEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14025 69.823 661.0 73760.0 25 0 8671.5 -1 0 62 985.4755737185478 0 985.4755737185478 PEAK CID FTMS 0 0 0 -1 0 20 3 RVV 3 -1 6.1979 0.0 0.0 0.31478 0.0 0.0 1001.3608631579956 610.3015841119749 1611.6624472699705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 RVV 0.31478 - 53 + 1 1.081 42002.6 1.0 8495 5528 14005 HBL1_DMSO_200M_050219_1,14025 HBL1_DMSO_200M_050219_1,14025, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14027 69.828 2.9 18235000.0 25 0 1735300.0 + 26180 NQFPGFKEV 9 80 533.2720326860506 1064.529512438901 2 533.2728149294853 MULTI CID FTMS 0 0 0 14026 15041069.0 0.4048103173218189 3 -0.22845458984375 1 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 26.268140514670165 0.1969607489560049 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}K[WP] 8 4 + 36.375 0.0 0.0 3.417 3.417 81.07 0.0 0.0 0.0 15.028200427267532 0.7190958273050185 0.7190958273050185 11.03531276083039 0 1.0 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}K[WP];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[PG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P[R{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[PG]{M(Oxidation (M))|F}KE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NV;[KC]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}K[WP];[PG]{M(Oxidation (M))|F}K{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NV 3.417;2.3804;1.773;1.4331;0.71624;0.68068;0.11995 -;-;-;-;-;-;- 120 + 1 1.153 44833.8 1.0 8496 5529 14026 HBL1_DMSO_200M_050219_1,14027 HBL1_DMSO_200M_050219_1,14027,NQFPGFKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14028 69.829 7.4 7073700.0 25 0 1032400.0 21070 LPAGGILVF 9 74 443.7734510303929 885.5323491275858 2 443.7737609744072 MULTI CID FTMS 0 0 0 14026 6853337.0 0.4010041755512644 13 -1.1207199096679688 2 Unmodified _LPAGGILVF_ ENSG00000150990|ENST00000308736|DHX37 20.871210003555333 0.2717241269066626 3 {I|L}P 2 7 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3741010958455 672.3741010958455 18.8290875765496 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 112 + 1 1.153 47126.4 1.0 8497 5529 14026 HBL1_DMSO_200M_050219_1,14028 HBL1_DMSO_200M_050219_1,14028,LPAGGILVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14029 69.83 5.3 9792600.0 25 0 2749600.0 + 27339 PHSSPLALL 9 72 467.7714589396702 933.5283649461404 2 467.7716552615166 MULTI CID FTMS 0 0 0 14026 10389681.0 0.324893280694211 -2 0.176544189453125 3 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 63.562846038646086 0.0241094678104353 3 TAMA{I|L}{I|L} 6 6 58.136 0.0 0.0 6.2276 0.0 0.0 315.17125136543126 0.0 315.17125136543126 0.0 39.22290038707452 0.0 0.0 0 1.3494850021680094 0.0 1.3494850021680094 0.0 TAMA{I|L}{I|L} 6.2276 - 401 1 1.153 45618.9 1.0 8498 5529 14026 HBL1_DMSO_200M_050219_1,14029 HBL1_DMSO_200M_050219_1,14029,PHSSPLALL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14030 69.831 8.9 4771900.0 25 0 605930.0 + 37122 TGYLNTVTV 9 70 484.25839615362605 966.502239374052 2 484.2587158083916 MULTI CID FTMS 0 0 0 14026 6665604.0 0.0157500437795001 34 -2.8315200805664062 4 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 36.12702656103203 0.0967173616627612 3 TN{I|L}CTV 6 5 50.623 0.0 0.0 5.2377 0.0 0.0 317.1953068562771 0.0 317.1953068562771 0.0 33.187587626244124 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.3494850021680094 TN{I|L}CTV 5.2377 - 185 + 1 1.153 39253.4 1.0 8499 5529 14026 HBL1_DMSO_200M_050219_1,14030 HBL1_DMSO_200M_050219_1,14030,TGYLNTVTV True True TGYLNTVTV 69.831138 484.258715808392 31432228352.0 14026.0 ENSG00000204628|ENST00000512805|RACK1;;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 6.091544628143311 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14031 69.832 7.1 5155200.0 25 0 614250.0 + 39372 VAHQQLIQI 9 68 525.3095752952198 1048.6045976572395 2 525.3094360232353 MULTI CID FTMS 0 0 0 14026 6446767.0 0.695561848601991 -2 0.176544189453125 5 Unmodified _VAHQQLIQI_ ENSG00000167986|ENST00000301764|DDB1 34.10243960390752 0.1078313939113124 3 QAG{I|L}{I|L}Q{I|L} 7 4 38.192 0.0 0.0 3.6422 0.0 0.0 307.1642018048844 0.0 307.1642018048844 0.0 25.97373228030179 0.0 0.0 0 0.5044321917401079 0.0 0.0 0.3807196863200844 QAG{I|L}{I|L}Q{I|L} 3.6422 - 100 1 1.153 37473.1 1.0 8500 5529 14026 HBL1_DMSO_200M_050219_1,14031 HBL1_DMSO_200M_050219_1,14031,VAHQQLIQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14032 69.833 16.0 2665000.0 25 0 358880.0 + 10536 FVDPNGKISL 10 63 545.300390678219 1088.5862284232378 2 545.3000976443291 MULTI CID FTMS 0 0 0 14026 2691235.25 0.1541256388123959 3 -0.22845458984375 6 Unmodified _FVDPNGKISL_ ENSG00000107862|ENST00000369983|GBF1;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1 23.78978130925829 0.4341852049148378 3 [{M(Oxidation (M))|F}V]DPN 5 5 38.429 0.0 0.0 3.5301 0.0 0.0 0.0 513.3041475885374 513.3041475885374 10.848848985623649 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 + [{M(Oxidation (M))|F}V]DPN 3.5301 + + 88 + 1 1.153 40631.0 1.0 8501 5529 14026 HBL1_DMSO_200M_050219_1,14032 HBL1_DMSO_200M_050219_1,14032,FVDPNGKISL False True FVDPNGKISL 69.833495 545.300097644329 489674336.0 14026.0 ENSG00000107862|ENST00000369983|GBF1;;nc|ENSG00000107862|Q92538-1|GBF1;;nc|ENSG00000107862|Q92538-3|GBF1;;nc|ENSG00000107862|Q92538-2|GBF1 5.489736080169678 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14033 69.835 29.0 4238300.0 25 0 504850.0 -1 0 95 320.211539464139 319.204262997539 1 320.2113220095634 MULTI CID FTMS 0 0 0 14026 2484445.5 0.3686826285236619 8 -0.7147979736328125 7 3 HP 2 -1 33.958 0.0 0.0 10.638 0.0 0.0 0.0 82.0669420831664 82.0669420831664 9.800821617046942 0.0 0.0 0.0 0 0.7302046884880938 1.0457574905606752 0.0 0.0 HP 10.638 - 13 + 1 1.153 100783.8 1.0 8502 5529 14026 HBL1_DMSO_200M_050219_1,14033 HBL1_DMSO_200M_050219_1,14033, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14034 69.836 17.0 3173000.0 25 0 301420.0 + 43846 YFIAPTGHSL 10 78 553.2872852090301 1104.56001748486 2 553.2880737185478 MULTI CID FTMS 0 0 0 14026 2229271.25 0.1099800308656501 6 -0.5735626220703125 8 Unmodified _YFIAPTGHSL_ ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11 58.6788170122104 0.0400518768368984 3 [Y{M(Oxidation (M))|F}]{I|L}APTGHS{I|L} 10 0 + 45.01 0.0 0.0 4.0749 4.0749 78.165 0.0 0.0 0.0 14.322581265925436 10.580371765640422 10.580371765640422 6.118872149547762 0 0.805462187404089 0.0 1.1549471895720984 0.0 + + [Y{M(Oxidation (M))|F}]{I|L}APTGHS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RP]PA{I|L}[YE];[Y{M(Oxidation (M))|F}]{I|L}APTGSH{I|L};[Y{M(Oxidation (M))|F}]{I|L}AP[HA]SS{I|L};[Y{M(Oxidation (M))|F}]{I|L}AP[HA]{[WT]|[RM]} 4.0749;3.521;3.4421;3.207;2.7288 +;-;-;-;- + 550 + 1 1.153 48956.8 1.0 8503 5529 14026 HBL1_DMSO_200M_050219_1,14034 HBL1_DMSO_200M_050219_1,14034,YFIAPTGHSL True True YFIAPTGHSL 69.835853 553.288073718548 617392128.0 14026.0 nc|ENSG00000125354|Q14141-4|SEPTIN6;;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;;nc|ENSG00000125354|Q14141|SEPTIN6;;ENSG00000125354|ENST00000394610|SEPTIN6;;nc|ENSG00000125354|Q14141-3|SEPTIN6;;ENSG00000138758|ENST00000264893|SEPTIN11 7.141000747680664 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14035 69.837 25.0 1658100.0 25 0 258480.0 9254 FHKPGLEK 8 61 478.2697038225996 954.5248547119992 2 478.2698852419853 MULTI CID FTMS 0 0 0 14026 2176366.0 0.7805145185894214 -2 0.176544189453125 9 Unmodified _FHKPGLEK_ ENSG00000173705|ENST00000309558|SUSD5 2.577480529830294 0.808687252328423 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.153 39130.8 1.0 8504 5529 14026 HBL1_DMSO_200M_050219_1,14035 HBL1_DMSO_200M_050219_1,14035,FHKPGLEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14036 69.838 44.0 1632000.0 25 0 248980.0 + + 16173 GKADAPVALVV 11 101 520.3114113601257 1038.6082697870513 2 520.3121215701103 MULTI CID FTMS 0 0 0 14026 1240428.5 0.5336592549506687 -2 0.176544189453125 10 Unmodified _IVDLVWPVV_ ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-4|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;ENSG00000006744|ENST00000338034|ELAC2;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 19.438996006549623 0.310492472477042 3 WA{I|L}VV 5 -1 26.07 0.0 0.0 2.5101 0.0 0.0 452.2784901349625 0.0 452.2784901349625 0.0 11.465912507003608 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 WA{I|L}VV 2.5101 - 144 1 1.153 57732.7 1.0 8505 5529 14026 HBL1_DMSO_200M_050219_1,14036 HBL1_DMSO_200M_050219_1,14036,IVDLVWPVV False False GKADAPVALVV 69.838263 520.31212157011 14194225.0 14026.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 5.992928187052409 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14037 69.839 29.0 2726800.0 25 0 254220.0 + 41194 VPEEMFREV 9 84 568.2763988849159 1134.5382448366315 2 568.2769042849541 MULTI CID FTMS 0 0 0 14026 1202187.375 0.588294531071558 1 -0.03179931640625 11 Unmodified _VPEEMFREV_ ENSG00000157212|ENST00000404141|PAXIP1 38.61474834105838 0.0830609365873449 3 VPEEM{M(Oxidation (M))|F} 6 3 76.121 0.0 0.0 6.7094 0.0 0.0 0.0 399.2000216119751 399.2000216119751 45.31865655543953 0.0 0.0 0.0 0 0.6747425010840047 1.6989700043360187 1.274227503252014 0.0 + VPEEM{M(Oxidation (M))|F} 6.7094 + + 88 + 1 1.153 72920.9 1.0 8506 5529 14026 HBL1_DMSO_200M_050219_1,14037 HBL1_DMSO_200M_050219_1,14037,VPEEMFREV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14038 69.841 29.0 730670.0 25 0 56752.0 + -1 QTAPIVLMV 9 54 494.2829219013761 986.5512908695522 2 494.2827331423759 MULTI CID FTMS 0 0 0 14026 1173577.375 0.5721240747319792 -2 0.176544189453125 12 Oxidation (M) _QTAPIVLM(Oxidation (M))V_ REV__AluJb_dup73373|chr10:75217950-75218104:+|1.4015711719544677|0.000524734054382|11.38|48.0|1|1|sense;REV__ENST00000468285.1_1_10:76973815-76980729:+|nuORF 4.3292370932331545 0.7635526921153418 3 V 1 -1 12.474 0.0 0.0 1.2644 0.0 0.0 869.4718211203319 0.0 869.4718211203319 0.0 1.6367946719316515 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2644 + + 6 + 1 1.153 22207.2 1.0 8507 5529 14026 HBL1_DMSO_200M_050219_1,14038 HBL1_DMSO_200M_050219_1,14038,QTAPIVLMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14039 69.842 26.0 1371700.0 25 0 108400.0 + 13010 HARQHRLV 8 67 508.79829943330793 1015.582045933416 2 508.7978088259697 MULTI CID FTMS 0 0 0 14026 1256036.25 0.328489559805964 -2 0.176544189453125 13 Unmodified _HARQHRLV_ REV__ENSG00000261221|ENST00000568956|ZNF865 2.889219685676258 0.8067950007271085 3 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 1.438 0.0 0.0 850.502682995719 0.0 850.502682995719 0.0 3.184110487935872 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.438 - 20 + 1 1.153 33349.0 1.0 8508 5529 14026 HBL1_DMSO_200M_050219_1,14039 HBL1_DMSO_200M_050219_1,14039,HARQHRLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14040 69.843 24.0 2116700.0 25 0 184550.0 + 35952 SVPMVQGECL 10 83 531.7516655092938 1061.4887780853876 2 531.7523681521416 MULTI CID FTMS 0 0 0 14026 1066166.875 0.4942301518963577 -2 0.176544189453125 14 Unmodified _SVPMVQGECL_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 13.042465956692816 0.6287021003332052 3 AAE{I|L}{[TV]|[{I|L}S]}PS{I|L} 9 8 20.6 0.0 0.0 1.9407 0.0 0.0 161.98226060667508 0.0 161.98226060667508 0.0 13.152982305149054 0.0 0.0 0 0.0 0.0 0.0 0.0 AAE{I|L}{[TV]|[{I|L}S]}PS{I|L} 1.9407 - 120 + 1 1.153 43664.3 1.0 8509 5529 14026 HBL1_DMSO_200M_050219_1,14040 HBL1_DMSO_200M_050219_1,14040,SVPMVQGECL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14041 69.844 39.0 901020.0 25 0 63787.0 + 24196 MAFKQMEQI 9 67 563.2744248915362 1124.5342968498724 2 563.2755615115166 MULTI CID FTMS 0 0 0 14026 1025381.9375 0.5699272286432107 1 -0.03179931640625 15 Unmodified _MAFKQMEQI_ ENSG00000144834|ENST00000478951|TAGLN3;ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 37.97399986684836 0.0865783450051559 3 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[KG]AMEQ{I|L} 10 2 + 57.113 0.0 0.0 5.0788 5.0788 75.52 0.0 0.0 0.0 21.46636480286716 44.01409360265546 21.46636480286716 1.7609125905568137 0 0.9731975075880328 2.0 0.4247425010840047 0.0 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[KG]AMEQ{I|L};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[KQ]MEQ{I|L};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[KG]AM[VS][PS];{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[KG]E{[DS]|[MA]|[CV]|TT}Q{I|L};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[KQ]M[VS][PS];{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[WK]{[DS]|[MA]|[CV]|TT}Q{I|L};{[DS]|[MA]|[CV]|TT}[VS]MA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[AG]S[YR]AMEQ{I|L};[WY][KG]AMEQ{I|L};[VP][NS]HAMEQ{I|L} 5.0788;4.9222;3.3984;3.3014;3.238;3.1448;3.0411;2.5096;2.3214;2.2341 -;+;-;-;-;-;-;-;-;- + 208 1 1.153 32798.0 1.0 8510 5529 14026 HBL1_DMSO_200M_050219_1,14041 HBL1_DMSO_200M_050219_1,14041,MAFKQMEQI True True MAFKQMEQI 69.844157 563.275561511517 13111952.0 14026.0 ENSG00000158710|ENST00000368097|TAGLN2;;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;;nc|ENSG00000158710|P37802-2|TAGLN2;;ENSG00000144834|ENST00000478951|TAGLN3 6.267934322357178 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14042 69.845 31.0 1175100.0 25 0 236000.0 -1 LMEPRACV 8 69 496.2378657400438 990.4611785468876 2 496.7408019900322 MULTI CID FTMS 0 0 0 14026 1056050.375 0.1326396428797732 34 -2.8315200805664062 16 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))EPRAC(Carbamidomethyl (C))V_ ENST00000496281.1_1_20:62323608-62327208:+|nuORF 11.114462752807354 0.7467182956244686 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WE]EA 6 -1 23.134 0.0 0.0 2.3356 0.0 0.0 0.0 212.116266616815 212.116266616815 -2.57207004880506 0.0 -2.57207004880506 0.0 0 0.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WE]EA 2.3356 - 144 1 1.153 33270.6 1.0 8511 5529 14026 HBL1_DMSO_200M_050219_1,14042 HBL1_DMSO_200M_050219_1,14042,LMEPRACV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14043 69.847 60.0 914150.0 25 0 56927.0 + 43559 WYQRVYQSL 9 73 621.8166671959714 1241.618781458743 2 621.8175536990166 MULTI CID FTMS 0 0 0 14026 958208.125 0.418020229442387 -2 0.176544189453125 17 Unmodified _WYQRVYQSL_ ENSG00000126267|ENST00000649813|COX6B1 92.4914307365334 0.0139747738690111 3 WY[RD]VP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L} 9 4 + 52.773 0.0 0.0 4.2504 4.2504 83.648 0.0 0.0 0.0 9.62627677717242 0.5363421423011374 0.5363421423011374 12.703037561203844 0 0.3252574989159953 1.6989700043360187 0.2887254899964357 0.7302046884880937 WY[RD]VP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L};[{M(Oxidation (M))|F}V]C[RD]VP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L};[YQ]WRVYQS{I|L};{[TV]|[{I|L}S]}Q{[HG]|PP}V[RD]Y[PA];[{M(Oxidation (M))|F}V]Q[MD]VP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L};[YQ]WRVY[AG]S{I|L};{[TV]|[{I|L}S]}Q{[HG]|PP}V[RD]CD{I|L};{[MS]|[{M(Oxidation (M))|F}A]}QYV[HA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L};{[TV]|[{I|L}S]}Q{[HG]|PP}V[C(Carbamidomethyl (C))N]QS{I|L};{[TV]|[{I|L}S]}Q{[HG]|PP}[WE]WS{I|L} 4.2504;3.2273;2.5166;2.0801;1.8632;1.7749;1.7324;1.6023;1.373;0.70373 -;-;-;-;-;-;-;-;-;- 156 + 1 1.153 48768.9 1.0 8512 5529 14026 HBL1_DMSO_200M_050219_1,14043 HBL1_DMSO_200M_050219_1,14043,WYQRVYQSL True True WYQRVYQSL 69.84683 621.817553699017 27364406.0 14026.0 ENSG00000126267|ENST00000649813|COX6B1 7.859649817148845 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14044 69.848 33.0 1521700.0 25 0 194340.0 + 27627 PLGINSAIVV 10 76 491.80054434472976 0 491.8005248904228 PEAK CID FTMS 0 0 0 14026 948338.5625 0.1416364433836456 3 -0.22845458984375 18 Unmodified _PLGINSAIVV_ REV__ENSG00000144136|ENST00000272542|SLC20A1;REV__ENSG00000168575|ENST00000520262|SLC20A2 22.736283301280096 0.276231959287006 3 ERA 3 -1 14.693 0.0 0.0 1.4968 0.0 0.0 490.3312084630939 132.04583154849846 622.3770400115924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ERA 1.4968 - 200 + 1 1.153 44274.9 1.0 8513 5529 14026 HBL1_DMSO_200M_050219_1,14044 HBL1_DMSO_200M_050219_1,14044,PLGINSAIVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14045 69.853 289.0 503480.0 25 0 51418.0 -1 QLSEHYEQMEY 11 162 736.8005359272519 1471.5865189213037 2 736.8014404177666 MULTI CID FTMS 0 0 0 14026 775010.75 0.298571518829585 -2 0.176544189453125 19 Oxidation (M) _QLSEHYEQM(Oxidation (M))EY_ ENSG00000261587|ENST00000696146|TMEM249 5.296884461304476 0.8501568894076437 3 [Q{I|L}]SNY{[{M(Oxidation (M))|F}C]|[YS]}NTA 10 -1 37.457 0.0 0.0 2.5453 0.0 0.0 0.0 327.09501641103174 327.09501641103174 2.8064635015167525 0.0 0.0 0.0 0 0.0 0.958607314841775 0.9802046884880938 1.200061205686631 [Q{I|L}]SNY{[{M(Oxidation (M))|F}C]|[YS]}NTA 2.5453 - 4088 1 1.153 105193.2 1.0 8514 5529 14026 HBL1_DMSO_200M_050219_1,14045 HBL1_DMSO_200M_050219_1,14045,QLSEHYEQMEY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14046 69.855 77.0 870890.0 25 0 107980.0 8669 EVIAALVP 8 88 406.24857980309577 810.4826066729916 2 406.2483703494072 MULTI CID FTMS 0 0 0 14026 751817.9375 0.047843318049037 13 -1.1207199096679688 20 Unmodified _EVIAALVP_ ENSG00000176624|ENST00000406189|MEX3C;ENSG00000183496|ENST00000329713|MEX3B;ENST00000558133.1_1_15:82335503-82336997:-|nuORF 5.760428011301431 0.7893668129297577 3 V 1 7 10.596 0.0 0.0 1.3074 0.0 0.0 693.4031827001385 0.0 693.4031827001385 0.0 -8.868018113164613 -8.868018113164613 0.0 0 0.0 0.0 0.0 0.0 + V 1.3074 + + 22 + 1 1.153 61362.2 1.0 8515 5529 14026 HBL1_DMSO_200M_050219_1,14046 HBL1_DMSO_200M_050219_1,14046,EVIAALVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14048 69.86 125.0 576180.0 25 0 46444.0 + 26153 NPYDRGSAFAI 11 104 605.7963334350826 1209.578113936965 2 605.7965576052666 MULTI CID FTMS 0 0 0 14047 700405.6875 0.9759870331616388 2 -0.1966552734375 1 Unmodified _NPYDRGSAFAI_ ENSG00000079785|ENST00000233084|DDX1 53.31671820480216 0.0992620867501809 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[RD]TN{M(Oxidation (M))|F}A{I|L} 10 5 + 63.592 0.0 0.0 5.2574 5.2574 82.108 0.0 0.0 0.0 3.543031117331949 45.11993046835002 3.543031117331949 6.262874945799766 0 1.2059771852360797 0.0 0.3807196863200844 1.1861818737241734 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[RD]TN{M(Oxidation (M))|F}A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RN]TN{M(Oxidation (M))|F}A{I|L};[{I|L}T]C(Carbamidomethyl (C))[RD]TN{M(Oxidation (M))|F}A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GG[RD]TN{M(Oxidation (M))|F}A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[RD]TGG{M(Oxidation (M))|F}A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[RD]T{M(Oxidation (M))|F}NA{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{[ES]|[DT]|[{I|L}C]}[NP]TN{M(Oxidation (M))|F}A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HA]{[YD]|[{M(Oxidation (M))|F}M]}N{M(Oxidation (M))|F}A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RN]TGG{M(Oxidation (M))|F}A{I|L};[{I|L}T][CG][RD]TN{M(Oxidation (M))|F}A{I|L} 5.2574;4.7396;4.6564;4.4997;4.4997;4.3426;4.2308;4.0817;3.982;3.8987 -;-;-;-;-;-;-;-;-;- 638 1 1.153 54653.0 1.0 8516 5530 14047 HBL1_DMSO_200M_050219_1,14048 HBL1_DMSO_200M_050219_1,14048,NPYDRGSAFAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14049 69.861 64.0 713880.0 25 0 56388.0 + 16154 ITWPNENDSL 10 77 594.7811644709559 1187.5477760087117 2 594.7817260622978 MULTI CID FTMS 0 0 0 14047 861875.4375 0.2623410773184014 -1 0.03179931640625 2 Unmodified _ITWPNENDSL_ REV__ENSG00000187555|ENST00000344836|USP7;REV__ENST00000565455.5_1_16:8987857-9023250:-|nuORF;REV__nc|ENSG00000187555|Q93009-3|USP7 7.289230182591677 0.6929195370588109 3 [DN]SV[DP][WR]S{I|L} 10 -1 [DN] + + 32.95 0.021824 0.0095273 2.7747 2.7747 49.768 0.0 0.0 0.0 0.0 25.158715643802765 0.0 0.0 0 0.0 0.0 1.055462187404089 0.0 [DN]SV[DP][WR]S{I|L} 2.7747 - 126 + 1 1.153 40033.4 1.0 8517 5530 14047 HBL1_DMSO_200M_050219_1,14049 HBL1_DMSO_200M_050219_1,14049,ITWPNENDSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14050 69.862 24.0 1466400.0 25 0 136590.0 -1 TAVVYTCSL 9 64 507.2525011771361 1012.4904494210722 2 507.2526428103447 MULTI CID FTMS 0 0 0 14047 1345910.625 0.2685588804062412 -1 0.03179931640625 3 Carbamidomethyl (C) _TAVVYTC(Carbamidomethyl (C))SL_ ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219129258-219130549:-|nuORF;ENST00000494720.5_1_2:219129258-219130297:-|nuORF 16.942295170755138 0.3780752226737986 3 S{I|L} 2 -1 20.701 0.0 0.0 2.0446 0.0 0.0 794.3633722499769 0.0 794.3633722499769 0.0 0.2435003003541425 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 S{I|L} 2.0446 + + 39 + 1 1.153 36239.0 1.0 8518 5530 14047 HBL1_DMSO_200M_050219_1,14050 HBL1_DMSO_200M_050219_1,14050,TAVVYTCSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14051 69.868 290.0 616450.0 25 0 119320.0 -1 0 64 1107.1136702808817 3318.319181442845 3 1107.448901355267 MULTI CID FTMS 0 0 0 14047 1037957.0625 0.1738154980174919 -1 0.03179931640625 4 3 R 1 -1 8.2268 0.0 0.0 0.24792 0.0 0.0 2211.756573822236 947.4413546197874 3159.197928442023 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 R 0.24792 - 111 + 1 1.153 149290.0 1.0 8519 5530 14047 HBL1_DMSO_200M_050219_1,14051 HBL1_DMSO_200M_050219_1,14051, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14052 69.869 57.0 562250.0 25 0 74319.0 23913 LVNFHQYSSQ 10 57 611.7939056639403 1221.5732583946806 2 611.7946044802666 MULTI CID FTMS 0 0 0 14047 818636.875 0.2467321369503611 -1 0.03179931640625 5 Unmodified _LVNFHQYSSQ_ ENSG00000184381|ENST00000332509|PLA2G6;ENST00000471636.5_1_22:38522531-38565433:-|nuORF;nc|ENSG00000184381|O60733-2|PLA2G6;nc|ENSG00000184381|O60733-3|PLA2G6 7.289230182591677 0.6929195370588109 3 {[QS]|[NT]}AD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{I|L}{I|L}{[VA]|[{I|L}G]} 11 10 + 33.231 0.0 0.0 2.7204 2.7204 71.697 0.0 0.0 0.0 5.862435673934282 20.599947491762947 5.862435673934282 3.010299956639816 0 0.0 0.0 0.0 0.0 {[QS]|[NT]}AD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{I|L}{I|L}{[VA]|[{I|L}G]};{[QS]|[NT]}AD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}V{I|L}{[VA]|[{I|L}G]};{[QS]|[NT]}AD{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}V{I|L}{[VA]|[{I|L}G]};{[QS]|[NT]}A{[CA]|SS}[DV]{M(Oxidation (M))|F}V{I|L}{[VA]|[{I|L}G]};{[QS]|[NT]}[MN][DV]{M(Oxidation (M))|F}V{I|L}{[VA]|[{I|L}G]} 2.7204;2.4739;2.0834;1.3361;0.79483 -;-;-;-;- 86 1 1.153 29390.6 1.0 8520 5530 14047 HBL1_DMSO_200M_050219_1,14052 HBL1_DMSO_200M_050219_1,14052,LVNFHQYSSQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14053 69.87 39.0 1368200.0 25 0 143310.0 + 43609 YAFPKAVSV 9 80 491.27355488651 980.53255683982 2 491.2732726931572 MULTI CID FTMS 0 0 0 14047 706373.875 1.0 0 0.0 6 Unmodified _YAFPKAVSV_ ENSG00000141526|ENST00000582743|SLC16A3;ENST00000579572.1_1_17:80193878-80195110:+|nuORF;ENST00000581642.1_1_17:80193878-80194172:+|nuORF;ENST00000584781.5_1_17:80193878-80195055:+|nuORF 18.1463463914782 0.3454829746528889 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}R{M(Oxidation (M))|F}A 6 5 38.377 0.0 0.0 3.9139 0.0 0.0 0.0 222.12532983951408 222.12532983951408 23.68440000316717 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}R{M(Oxidation (M))|F}A 3.9139 - 257 + 1 1.153 48062.6 1.0 8521 5530 14047 HBL1_DMSO_200M_050219_1,14053 HBL1_DMSO_200M_050219_1,14053,YAFPKAVSV False True YAFPKAVSV 69.870476 491.273272693157 5496617.0 14047.0 ENST00000584781.5_1_17:80193878-80195055:+|nuORF;;ENSG00000141526|ENST00000582743|SLC16A3;;ENST00000579572.1_1_17:80193878-80195110:+|nuORF;;ENST00000581642.1_1_17:80193878-80194172:+|nuORF 3.32982341448466 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14054 69.873 101.0 662050.0 25 0 84124.0 24425 MGLLLNKQ 8 90 458.76772601772586 915.5208991022516 2 458.7677184939384 MULTI CID FTMS 0 0 0 14047 559668.375 0.7344656438367041 2 -0.1966552734375 7 Unmodified _MGLLLNKQ_ ENST00000379170.8_2_6:13801602-13807159:-|nuORF 24.67388899826682 0.525179942228231 3 MG{I|L}{I|L}V{[RE]|[WV]}V 8 4 + 62.146 0.0 0.0 6.788 6.788 80.562 0.0 0.0 0.0 23.94138788323808 1.4017870316503576 1.4017870316503576 1.4017870316503576 0 1.0 1.0969100130080565 0.0 0.3252574989159953 MG{I|L}{I|L}V{[RE]|[WV]}V;MG{I|L}{I|L}V[RD]{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}WP;[{I|L}P][YK]{I|L}WP 6.788;6.6349;3.0528;0.76237 -;-;-;- 103 + 1 1.153 60363.4 1.0 8522 5530 14047 HBL1_DMSO_200M_050219_1,14054 HBL1_DMSO_200M_050219_1,14054,MGLLLNKQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14055 69.874 63.0 632690.0 25 0 77649.0 + 13981 HYYDSTIEL 9 72 570.7641274571915 1139.513701981183 2 570.7643920779228 MULTI CID FTMS 0 0 0 14047 534946.875 0.1406822359073025 7 -0.6829986572265625 8 Unmodified _HYYDSTIEL_ ENSG00000100453|ENST00000216341|GZMB;ENST00000526004.1_1_14:25101006-25102204:-|nuORF 60.38955033654506 0.025866396858536 3 {[WN]|[YH]}YD{[MG]|[TS]}{I|L}E{I|L} 9 0 + 62.188 0.0 0.0 5.4574 5.4574 89.69 0.0 0.0 0.0 22.37643016799588 48.88743756437101 22.37643016799588 34.82118944875172 0 0.7059771852360797 1.5228787452803376 0.8807196863200843 0.0 + + {[WN]|[YH]}YD{[MG]|[TS]}{I|L}E{I|L};[AG][{M(Oxidation (M))|F}E][QA]Y{I|L}E{I|L} 5.4574;2.4016 +;- + 78 1 1.153 37895.6 1.0 8523 5530 14047 HBL1_DMSO_200M_050219_1,14055 HBL1_DMSO_200M_050219_1,14055,HYYDSTIEL True True HYYDSTIEL 69.874176 570.764392077923 153206436.0 14047.0 ENST00000526004.1_1_14:25101006-25102204:-|nuORF;;ENSG00000100453|ENST00000216341|GZMB 6.674315293629964 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14056 69.876 51.0 1027900.0 25 0 257160.0 27842 PLQSQYIV 8 84 474.2635895750614 946.5126262169229 2 474.2639037966728 MULTI CID FTMS 0 0 0 14047 515354.59375 0.2895319656508652 -1 0.03179931640625 9 Unmodified _PLQSQYIV_ ENST00000268989.7_1_17:2283201-2283462:+|nuORF 24.67388899826682 0.525179942228231 3 VV[EC][KS]A{I|L}V 9 6 + 30.862 0.0 0.0 3.2606 3.2606 73.959 0.0 0.0 0.0 4.102196946754049 7.618705200516022 4.102196946754049 4.102196946754049 0 0.6237125054200234 1.6989700043360187 0.3252574989159953 0.0 VV[EC][KS]A{I|L}V;[{I|L}A]MD[KS]A{I|L}V;{[DA]|[EG]}[KP]AAY{I|L}V;{[DA]|[EG]}[KP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VP]PY{I|L}V;[PS]VQAAY{I|L}V;[PS]VQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}V;[VS]PQAAY{I|L}V;[{I|L}P][NS]AAY{I|L}V;[VS]PQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}V 3.2606;2.8272;2.0469;1.9957;1.2333;1.1434;1.0922;0.84907;0.82673;0.79788 -;-;-;-;-;-;-;-;-;- 160 1 1.153 47260.1 1.0 8524 5530 14047 HBL1_DMSO_200M_050219_1,14056 HBL1_DMSO_200M_050219_1,14056,PLQSQYIV False True YPIGTNAIV 69.875507 474.263903796673 19127566.0 14047.0 nc|ENSG00000125630|Q9H9Y6-5|POLR1B;;ENSG00000125630|ENST00000263331|POLR1B;;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;;nc|ENSG00000125630|Q9H9Y6-4|POLR1B 0.3059873481591542 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14057 69.884 453.0 434270.0 25 0 21562.0 -1 RCHRRRRRCCC 11 146 866.9067123982009 1731.7988718632016 2 867.4020263552666 MULTI CID FTMS 0 0 0 14047 378303.59375 0.0210222620333663 53 -4.23663330078125 10 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 3 [NP]{I|L}NA[QP]QDAD{I|L}NP[EP] 16 -1 + 81.0 0.0 0.0 4.6772 4.6772 72.389 0.0 0.0 0.0 12.455126678141497 7.659167939666318 7.659167939666318 0.6618377346445925 0 0.0 1.3010299956639813 0.0 1.700061205686631 [NP]{I|L}NA[QP]QDAD{I|L}NP[EP];[NP]{I|L}NM[RH]DAD{I|L}NP[EP];[NP]{I|L}AN[QP]QDAD{I|L}NP[EP];[NP]{I|L}AV[HC]QDAD{I|L}NP[EP];[NP]{I|L}[VS][HS]QDAD{I|L}NP[EP];[NP]{I|L}NA[QP][AG]DAD{I|L}NP[EP];[NP]{I|L}NA[QP]QDAD{I|L}GGP[EP];[NP]{I|L}GGA[QP]QDAD{I|L}NP[EP];[NP]{I|L}NM[RH]DAD{I|L}GGP[EP];[NP]{I|L}GGM[RH]DAD{I|L}NP[EP] 4.6772;4.639;4.4829;4.4326;4.2531;4.1567;4.1567;4.1567;4.1175;4.1175 -;-;-;-;-;-;-;-;-;- 25686 1 1.153 132343.4 1.0 8525 5530 14047 HBL1_DMSO_200M_050219_1,14057 HBL1_DMSO_200M_050219_1,14057,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14058 69.891 444.0 597650.0 25 0 39382.0 -1 0 155 614.3128150945079 1839.916615883724 3 614.6473876833916 MULTI CID FTMS 0 0 0 14047 365638.28125 1.0 0 0.0 11 3 {[TV]|[{I|L}S]}VPSGASTGVHEA{I|L}EMR 18 -1 + 139.19 0.0 0.0 7.565 7.565 82.338 0.0 0.0 0.0 22.441202230412628 1.249387366082999 1.249387366082999 1.249387366082999 0 0.9247425010840048 1.6989700043360187 0.8494850021680094 0.25 {[TV]|[{I|L}S]}VPSGASTGVHEA{I|L}EMR;{[TV]|[{I|L}S]}VPSGASTGVHEA{I|L}ERM;{[TV]|[{I|L}S]}VPSGASTGVHEA{I|L}ESS{I|L};{[TV]|[{I|L}S]}VSPGASTGVHEA{I|L}EMR;{[TV]|[{I|L}S]}VPSQSTGVHEA{I|L}EMR;{[TV]|[{I|L}S]}VPSGASTRHEA{I|L}EMR;{[TV]|[{I|L}S]}VSPGASTGVHEA{I|L}ERM;{[TV]|[{I|L}S]}VPSQSTGVHEA{I|L}ERM;{[TV]|[{I|L}S]}VPSGASTRHEA{I|L}ERM;{[TV]|[{I|L}S]}VPSGASTGVHEA{I|L}ET[VS] 7.565;7.4971;7.2688;7.2648;7.1986;7.1986;7.1969;7.1307;7.1307;7.0834 -;-;-;-;-;-;-;-;-;- 22111 + 1 1.153 194448.3 1.0 8526 5530 14047 HBL1_DMSO_200M_050219_1,14058 HBL1_DMSO_200M_050219_1,14058, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14059 69.9 480.0 654440.0 25 0 87340.0 -1 TAFGMNMGFS 10 229 539.7199545810788 1077.4253562289575 2 539.7195922732353 MULTI CID FTMS 0 0 0 14047 358526.46875 0.1052490964584458 -1 0.03179931640625 12 Oxidation (M) _TAFGM(Oxidation (M))NMGFS_ ENST00000530336.2_1_14:51390814-51398461:-|nuORF 38.17557092003332 0.1768326257063233 3 [VG]YGS{M(Oxidation (M))|F}N{I|L} 8 -1 73.247 0.0 0.0 6.7983 0.0 0.0 0.0 237.0008333795532 237.0008333795532 43.14349351569301 0.0 0.0 0.0 0 0.8600233437409719 2.0 0.2742275032520141 2.004432191740108 [VG]YGS{M(Oxidation (M))|F}N{I|L} 6.7983 - 3160 + 1 1.153 237791.6 1.0 8527 5530 14047 HBL1_DMSO_200M_050219_1,14059 HBL1_DMSO_200M_050219_1,14059,TAFGMNMGFS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14060 69.911 626.0 486940.0 25 0 71970.0 + 31150 RLPDIPLRQV 10 163 402.9151187581389 1205.7235268746167 3 402.9152404665947 MULTI CID FTMS 0 0 0 14047 343359.28125 1.0 0 0.0 13 Unmodified _RLPDIPLRQV_ ENSG00000164941|ENST00000523731|INTS8;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8 37.77132515983256 0.1811013699114492 3 [R{I|L}]PD{I|L} 5 5 39.327 0.0 0.0 3.2617 0.0 0.0 0.0 608.3516076583217 608.3516076583217 9.968713366452135 0.0 0.0 0.0 0 0.5 0.8538719643217619 0.25 1.0356668758921828 + [R{I|L}]PD{I|L} 3.2617 + + 432 1 1.153 236122.2 1.0 8528 5530 14047 HBL1_DMSO_200M_050219_1,14060 HBL1_DMSO_200M_050219_1,14060,RLPDIPLRQV False True RLPDIPLRQV 69.910905 402.915240466595 2795238.5 14047.0 ENST00000523321.5_1_8:95835614-95871872:+|nuORF;;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;;ENSG00000164941|ENST00000523731|INTS8;;nc|ENSG00000164941|Q75QN2-2|INTS8 5.25697676340739 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14061 69.924 780.0 648390.0 25 0 34358.0 + 17132 KLHEYFPEM 9 326 398.5273300067731 1192.5601606205194 3 398.5279113650322 MULTI CID FTMS 0 0 0 14047 240644.78125 0.2361562190338778 -1 0.03179931640625 14 Unmodified _KLHEYFPEM_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 34.40172386719151 0.1061884637610825 3 [EP]T[KS]K{M(Oxidation (M))|F}PEM 10 6 + 49.524 0.0 0.0 4.1528 4.1528 73.682 0.0 0.0 0.0 2.460590505157427 9.699915470362017 2.460590505157427 2.460590505157427 0 0.3935078169319297 1.5228787452803376 0.9559771852360796 0.5114393726401688 [EP]T[KS]K{M(Oxidation (M))|F}PEM;{[YC]|[HE]}{I|L}KY{M(Oxidation (M))|F}PEM;[EP]TT{I|L}{I|L}YPEM;[TP]E[KS]K{M(Oxidation (M))|F}PEM;[R{I|L}][HT]Y{M(Oxidation (M))|F}PEM;[H{I|L}]EKY{M(Oxidation (M))|F}PEM;[EP]T[KS]KP{M(Oxidation (M))|F}EM;{[YC]|[HE]}{I|L}K{M(Oxidation (M))|F}YPEM;[TP]{[QC]|[C(Carbamidomethyl (C))A]}{I|L}K{M(Oxidation (M))|F}PEM;[EP]T[KS]{M(Oxidation (M))|F}KPEM 4.1528;3.9465;3.7388;3.582;3.5364;3.4269;3.425;3.3367;3.2783;3.2345 -;-;-;-;-;-;-;-;-;- 4759 1 1.153 383824.7 1.0 8529 5530 14047 HBL1_DMSO_200M_050219_1,14061 HBL1_DMSO_200M_050219_1,14061,KLHEYFPEM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14062 69.934 535.0 516860.0 25 0 86412.0 + 20914 LMYEEGEGTKL 11 182 635.307674034269 1268.600795135338 2 635.3104736208916 MULTI CID FTMS 0 0 0 14047 220960.78125 0.5970041822195763 -1 0.03179931640625 15 Unmodified _LMYEEGEGTKL_ REV__ENSG00000113356|ENST00000651687|POLR3G 16.149105407346934 0.6992268271266642 3 [{I|L}P]{I|L}GS[YC(Carbamidomethyl (C))]G{I|L}P{I|L} 11 -1 58.238 0.0 0.0 4.5907 0.0 0.0 0.0 94.9523359673066 94.9523359673066 38.906020503926406 0.0 0.0 0.0 0 0.75 2.0 0.3807196863200844 0.0 [{I|L}P]{I|L}GS[YC(Carbamidomethyl (C))]G{I|L}P{I|L} 4.5907 - 949 1 1.153 203076.5 1.0 8530 5530 14047 HBL1_DMSO_200M_050219_1,14062 HBL1_DMSO_200M_050219_1,14062,LMYEEGEGTKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14063 69.945 576.0 228700.0 25 0 15663.0 + 2644 ATAPLISGV 9 121 828.482040944278 827.4747644776779 1 828.4855224490166 MULTI CID FTMS 0 0 0 14047 168438.921875 0.2193028449889438 4 -0.40863037109375 16 Unmodified _ATAPLISGV_ ENSG00000138802|ENST00000265175|SEC24B;nc|ENSG00000138802|O95487-2|SEC24B;nc|ENSG00000138802|O95487-3|SEC24B 74.92900055777586 0.0191935851694334 3 [{I|L}P]{I|L}ATASGV 9 6 + 58.101 0.0 0.0 7.0215 7.0215 83.807 0.0 0.0 0.0 15.01781652212236 12.98332479720628 12.98332479720628 3.0102999566398125 0 0.25 1.3979400086720375 1.4489700043360187 0.0 [{I|L}P]{I|L}ATASGV;[{I|L}P]A{I|L}TASGV;[{I|L}P]A[TA]{I|L}SGV;[{I|L}P]{I|L}ATAGSV;[{I|L}P]A{I|L}TAGSV;[{I|L}P]A[TA]{I|L}GSV;[{I|L}P]{I|L}SGVSGV;[{I|L}P]{I|L}SKDGV;[{I|L}P]TAA{I|L}SGV;[{I|L}P]{I|L}ATQSV 7.0215;6.6577;6.563;6.3055;5.9417;5.8469;5.7955;5.7716;5.7183;5.4348 -;-;-;-;-;-;-;-;-;- 1677 1 1.153 91697.0 1.0 8531 5530 14047 HBL1_DMSO_200M_050219_1,14063 HBL1_DMSO_200M_050219_1,14063,ATAPLISGV True True ATAPLISGV 69.945363 828.485522449017 8798544.0 14047.0 ENSG00000138802|ENST00000265175|SEC24B;;nc|ENSG00000138802|O95487-2|SEC24B;;nc|ENSG00000138802|O95487-3|SEC24B 5.625467936197917 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14064 69.955 577.0 430700.0 25 0 32199.0 + 23538 LTLLDLSSNKL 11 205 608.8610932636354 0 608.8613769412041 PEAK CID FTMS 0 0 0 14047 168053.109375 0.518908007174801 -1 0.03179931640625 17 Unmodified _LTLLDLSSNKL_ ENSG00000181754|ENST00000369864|AMIGO1 42.312485326615175 0.1091777760352646 3 {I|L}{I|L}DDK 5 7 31.81 0.0 0.0 2.6166 0.0 0.0 101.04722104185164 527.3205050104124 628.3677260522641 0.0 0.0 0.0 0.0 0 0.8406275676218723 0.0 0.7742275032520141 0.0 {I|L}{I|L}DDK 2.6166 - 1908 + 1 1.153 177122.6 1.0 8532 5530 14047 HBL1_DMSO_200M_050219_1,14064 HBL1_DMSO_200M_050219_1,14064,LTLLDLSSNKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14065 69.969 800.0 358690.0 25 0 75463.0 + 4708 DDVSRQLQENV 11 171 434.88240850470754 0 434.8826782107353 PEAK CID FTMS 0 0 0 14047 140527.5625 0.5901303392892305 -16 0.9400634765625 18 Unmodified _DDVSRQLQENV_ REV__ENSG00000174799|ENST00000257287|CEP135 3.2813086475875832 0.4761840153648598 3 GP{I|L} 3 -1 8.4164 0.0 0.0 0.96991 0.0 0.0 184.35429418925668 413.2123507135376 597.5666449027942 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GP{I|L} 0.96991 - 25 + 1 1.153 228420.0 0.9100000262260436 8533 5530 14047 HBL1_DMSO_200M_050219_1,14065 HBL1_DMSO_200M_050219_1,14065,DDVSRQLQENV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14066 69.983 693.0 481130.0 25 0 82758.0 + -1 ATLNDGVVVQV 11 144 1114.610326374574 0 1114.610278308392 PEAK CID FTMS 0 0 0 14047 124138.1875 0.7534766588832754 2 -0.1966552734375 19 ENSG00000145907|ENST00000356245|G3BP1;nc|ENSG00000145907|Q13283-2|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF 3 QVVR[NS]K 7 -1 26.629 0.0 0.0 1.1956 0.0 0.0 1230.678952454423 182.04616724185783 1412.725119696281 0.0 0.0 0.0 0.0 0 0.0 0.0 1.447621246364342 1.6307196863200843 QVVR[NS]K 1.1956 - 3176 + 1 1.153 237134.0 1.0 8534 5530 14047 HBL1_DMSO_200M_050219_1,14066 HBL1_DMSO_200M_050219_1,14066, False False ATLNDGVVVQV 69.982542 1114.61027830839 5730359.25 14047.0 ENSG00000145907|ENST00000356245|G3BP1;;nc|ENSG00000145907|Q13283-2|G3BP1;;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;;ENST00000519832.1_1_5:151166169-151170647:+|nuORF 2.3857682844003043 1.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14067 69.996 800.0 399260.0 25 0 59410.0 + 27692 PLKLTSAV 8 214 414.76211459499535 827.5096762567907 2 414.7618896365166 MULTI CID FTMS 0 0 0 14047 102115.6953125 0.0083982690309985 14 -1.2636489868164062 20 Unmodified _PLKLTSAV_ REV__ENSG00000138356|ENST00000374700|AOX1 6.354104778181461 0.7857632046190106 3 {I|L}PW 3 -1 20.177 0.0 0.0 2.4383 0.0 0.0 413.2842561901876 0.0 413.2842561901876 0.0 8.39455105203525 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}PW 2.4383 - 147 + 1 1.153 244660.8 0.8199999928474426 8535 5530 14047 HBL1_DMSO_200M_050219_1,14067 HBL1_DMSO_200M_050219_1,14067,PLKLTSAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14069 70.001 3.9 7027100.0 25 0 519090.0 + 28850 QAIEKLEEI 9 64 536.7977112850735 1071.580869636947 2 536.7980224490166 MULTI CID FTMS 0 0 0 14068 15491194.0 1.0 0 0.0 1 Unmodified _QAIEKLEEI_ ENSG00000230453|ENST00000684830|ANKRD18B;ENST00000354752.5_1_9:99922575-99942308:-|nuORF;nc|ENSG00000230453|A2A2Z9|ANKRD18B 13.90604991867851 0.4602628045680013 3 {[QN]|[E{I|L}]|[KN]}KEE{I|L} 6 3 28.416 0.0 0.0 2.6518 0.0 0.0 0.0 327.1640354907158 327.1640354907158 9.151603310239905 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}KEE{I|L} 2.6518 - 64 1 1.142 26752.9 1.0 8536 5531 14068 HBL1_DMSO_200M_050219_1,14069 HBL1_DMSO_200M_050219_1,14069,QAIEKLEEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14070 70.002 13.0 2505300.0 25 0 161410.0 33295 SFQRQLSSA 9 65 512.2657609122214 1022.5169688912428 2 512.2658569216728 MULTI CID FTMS 0 0 0 14068 3282797.5 1.0 0 0.0 2 Unmodified _SFQRQLSSA_ ENSG00000081913|ENST00000262719|PHLPP1;nc|ENSG00000081913|O60346-2|PHLPP1 10.823927491677226 0.5436922275383211 3 SSA 3 6 18.689 0.0 0.0 1.8278 0.0 0.0 759.4042502406552 0.0 759.4042502406552 0.0 4.709836165889797 0.0 0.0 0 0.4247425010840047 0.0 0.2134679910804404 0.0 + SSA 1.8278 + + 22 + 1 1.142 34364.3 1.0 8537 5531 14068 HBL1_DMSO_200M_050219_1,14070 HBL1_DMSO_200M_050219_1,14070,SFQRQLSSA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14071 70.003 4.7 5260600.0 25 0 952760.0 33679 SIYEVAMQL 9 54 527.2677912746994 1052.5210296161988 2 527.2684203982353 MULTI CID FTMS 0 0 0 14068 10826709.0 0.3112215413063918 -3 0.3063583374023437 3 Unmodified _SIYEVAMQL_ ENSG00000075539|ENST00000358350|FRYL 11.640296217721598 0.521594087909532 3 W[DP] 3 9 14.705 0.0 0.0 1.3971 0.0 0.0 636.34770400215 0.0 636.34770400215 0.0 2.715299873086609 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 W[DP] 1.3971 - 12 1 1.142 25245.1 1.0 8538 5531 14068 HBL1_DMSO_200M_050219_1,14071 HBL1_DMSO_200M_050219_1,14071,SIYEVAMQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14072 70.004 12.0 1350600.0 25 0 125810.0 + 36192 SVVSPSSFENV 11 46 576.281901475813 1150.549250018426 2 576.2827636599541 MULTI CID FTMS 0 0 0 14068 4838362.0 1.0 0 0.0 4 Unmodified _SVVSPSSFENV_ ENSG00000070831|ENST00000656825|CDC42;nc|ENSG00000289694|P60953-1|CDC42 11.494710602746466 0.7960433852372589 3 [VS]V 3 8 27.447 0.0 0.0 2.3856 0.0 0.0 0.0 862.3566895538353 862.3566895538353 21.96272488392665 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [VS]V 2.3856 + + 8 1 1.142 20017.5 1.0 8539 5531 14068 HBL1_DMSO_200M_050219_1,14072 HBL1_DMSO_200M_050219_1,14072,SVVSPSSFENV False True SVVSPSSFENV 70.004058 576.282763659954 66297324.0 14068.0 nc|ENSG00000289694|P60953-1|CDC42;;ENSG00000070831|ENST00000656825|CDC42 6.351293245951335 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14073 70.005 7.4 6438700.0 25 0 758020.0 + 25624 NFPEKISSL 9 72 517.7790773719883 1033.5436018107764 2 517.7800170779228 MULTI CID FTMS 0 0 0 14068 4186024.0 1.0 0 0.0 5 Unmodified _NFPEKISSL_ ENST00000420672.1_1_2:179278757-179278808:+|nuORF 12.240655878213236 0.5053430591993562 3 [EP]K{I|L}SS 6 3 26.66 0.0 0.0 2.5795 0.0 0.0 0.0 389.1804786020452 389.1804786020452 2.7420268358783595 0.0 0.0 0.0 0 0.0 0.0 1.0629529932484498 0.0 + [EP]K{I|L}SS 2.5795 + + 108 1 1.142 44899.9 1.0 8540 5531 14068 HBL1_DMSO_200M_050219_1,14073 HBL1_DMSO_200M_050219_1,14073,NFPEKISSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14074 70.006 13.0 5080900.0 25 0 611920.0 + 4914 DGLAPPQHLI 10 96 530.7917658106638 1059.5689786881276 2 530.7931396365166 MULTI CID FTMS 0 0 0 14068 3109646.75 1.0 0 0.0 6 Unmodified _DGLAPPQHLI_ ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;nc|ENSG00000141510|P04637-7|TP53;nc|ENSG00000141510|P04637-8|TP53;nc|ENSG00000141510|P04637-9|TP53 22.736283301280096 0.4578556481593033 3 {[RE]|[WV]}AP[YK]PS{I|L} 9 7 + 33.452 0.0 0.0 3.1571 3.1571 71.546 0.0 0.0 0.0 5.4440873258899884 3.001896823007833 3.001896823007833 2.742275032520144 0 0.8807196863200843 0.0 0.3252574989159953 0.0 {[RE]|[WV]}AP[YK]PS{I|L};{[RE]|[WV]}A{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PS{I|L};{[RE]|[WV]}AP[QP][H{I|L}]{I|L} 3.1571;2.8983;2.4463 -;-;- 373 + 1 1.142 56044.6 1.0 8541 5531 14068 HBL1_DMSO_200M_050219_1,14074 HBL1_DMSO_200M_050219_1,14074,DGLAPPQHLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14075 70.008 23.0 1253600.0 25 0 102740.0 + 21772 LPNAVITRI 9 55 498.8137031573884 995.6128533815768 2 498.8137084841728 MULTI CID FTMS 0 0 0 14068 2982481.0 0.0305310068431657 -10 0.8534088134765625 7 Unmodified _LPNAVITRI_ ENSG00000148229|ENST00000374171|POLE3;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 18.373094154950223 0.3393451798331396 3 {I|L}PNAV{I|L} 6 3 67.964 0.0 0.0 6.8263 0.0 0.0 0.0 385.2203463190063 385.2203463190063 56.28144697160131 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}PNAV{I|L} 6.8263 + + 33 + 1 1.142 28306.3 1.0 8542 5531 14068 HBL1_DMSO_200M_050219_1,14075 HBL1_DMSO_200M_050219_1,14075,LPNAVITRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14076 70.009 16.0 1454700.0 25 0 106220.0 -1 TLVMWLII 8 58 502.79627367398126 1003.5779944147624 2 502.7966796755791 MULTI CID FTMS 0 0 0 14068 2468282.0 1.0 0 0.0 8 Oxidation (M) _TLVM(Oxidation (M))WLII_ ENST00000287474.9_1_1:100214242-100214314:-|nuORF 5.760428011301431 0.7893668129297577 3 E 1 -1 5.9862 0.0 0.0 0.59649 0.0 0.0 789.4458208081204 82.06705652408436 871.5128773322048 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 E 0.59649 - 10 + 1 1.142 28477.1 1.0 8543 5531 14068 HBL1_DMSO_200M_050219_1,14076 HBL1_DMSO_200M_050219_1,14076,TLVMWLII False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14077 70.01 23.0 2562200.0 25 0 415770.0 + 22641 LPYPVKIKV 9 67 352.898783888358 1055.674522265274 3 352.8986083865166 MULTI CID FTMS 0 0 0 14068 2210773.75 1.0 0 0.0 9 Unmodified _LPYPVKIKV_ ENSG00000074696|ENST00000261875|HACD3;nc|ENSG00000074696|Q9P035-2|HACD3 34.93206674587334 0.1032771302489716 3 {I|L}PYPVK{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 57.841 0.0 0.0 5.4791 5.4791 82.011 0.0 0.0 0.0 30.39381281052492 3.9524249272868417 3.9524249272868417 5.255762612236907 0 0.6237125054200234 1.3010299956639813 0.0 0.0 + + {I|L}PYPVK{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}PYVPK{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 5.4791;4.9812 +;- + 93 + 1 1.142 58231.2 1.0 8544 5531 14068 HBL1_DMSO_200M_050219_1,14077 HBL1_DMSO_200M_050219_1,14077,LPYPVKIKV True True LPYPVKIKV 70.009952 352.898608386517 15673437.0 14068.0 ENSG00000074696|ENST00000261875|HACD3;;nc|ENSG00000074696|Q9P035-2|HACD3 5.468278328577678 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14078 70.014 195.0 731390.0 25 0 54430.0 -1 0 101 1031.4510464598343 3091.331309979704 3 1032.120776355267 MULTI CID FTMS 0 0 0 14068 1575637.75 1.0 0 0.0 10 3 AGK[{M(Oxidation (M))|F}V]SYC(Carbamidomethyl (C))[HT] 10 -1 33.567 0.0 0.0 1.0858 0.0 0.0 1922.8086792197405 0.0 1922.8086792197405 0.0 12.314469198565456 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.3807196863200844 AGK[{M(Oxidation (M))|F}V]SYC(Carbamidomethyl (C))[HT] 1.0858 - 20392 + 1 1.142 97538.1 1.0 8545 5531 14068 HBL1_DMSO_200M_050219_1,14078 HBL1_DMSO_200M_050219_1,14078, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14079 70.015 28.0 853000.0 25 0 50599.0 + 19445 LFARYHNQL 9 54 581.3122252688712 1160.6098976045423 2 581.3128539919853 MULTI CID FTMS 0 0 0 14068 1275651.0 0.8491112262280743 1 -0.0555343627929687 11 Unmodified _LFARYHNQL_ REV__ENSG00000066279|ENST00000367409|ASPM 12.531546534597751 0.4974689918368763 3 MA[Q{I|L}] 4 -1 16.198 0.0 0.0 1.3956 0.0 0.0 699.381639549025 0.0 699.381639549025 0.0 3.433677739595033 0.0 0.0 0 0.0 0.0 0.0 0.0 MA[Q{I|L}] 1.3956 - 14 1 1.142 23499.8 1.0 8546 5531 14068 HBL1_DMSO_200M_050219_1,14079 HBL1_DMSO_200M_050219_1,14079,LFARYHNQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14080 70.017 102.0 290170.0 25 0 27087.0 + -1 VLCCFHRSRC 10 61 697.8177429767029 1393.6209330202057 2 697.8188354372978 MULTI CID FTMS 0 0 0 14068 1122563.25 0.9711078180371924 -3 0.3063583374023437 12 3 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))C(Carbamidomethyl (C))FHRSRC(Carbamidomethyl (C))_ REV__ENST00000378898.8_1_15:100603866-100879329:-|nuORF 4.3292370932331545 0.7066112369704343 3 {I|L}{I|L}{[VA]|[{I|L}G]} 4 -1 16.198 0.0 0.0 1.1623 0.0 0.0 979.3378930052348 0.0 979.3378930052348 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{[VA]|[{I|L}G]} 1.1623 - 37 1 1.142 32599.7 1.0 8547 5531 14068 HBL1_DMSO_200M_050219_1,14080 HBL1_DMSO_200M_050219_1,14080,VLCCFHRSRC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14081 70.022 284.0 417990.0 25 0 63989.0 + 2245 AQFEPDSTEYI 11 136 650.2901782230374 1298.5658035128747 2 650.2903320193291 MULTI CID FTMS 0 0 0 14068 685108.3125 1.0 0 0.0 13 Unmodified _AQFEPDSTEYI_ ENSG00000175110|ENST00000680020|MRPS22;ENST00000483545.1_1_3:139065838-139069914:+|nuORF;ENST00000498505.5_1_3:139068252-139075853:+|nuORF 49.52724829834842 0.1202481389936634 3 [DP]STEAQ{M(Oxidation (M))|F}EY{I|L} 11 8 + 57.969 0.0 0.0 4.4641 4.4641 77.293 0.0 0.0 0.0 9.58078620706413 10.550088832413527 9.58078620706413 4.247425010840047 0 0.8182503180159344 0.958607314841775 1.9802046884880933 0.0 [DP]STEAQ{M(Oxidation (M))|F}EY{I|L};[DP]STEAQE{M(Oxidation (M))|F}Y{I|L};[DP]STEA[AG]{M(Oxidation (M))|F}EY{I|L};[QA]{M(Oxidation (M))|F}E[DP]STEY{I|L};[DP]STTWSTEY{I|L};[DP]STEA[AG]E{M(Oxidation (M))|F}Y{I|L};[PS]DTEAQ{M(Oxidation (M))|F}EY{I|L};[QA]E[NS]AQ{M(Oxidation (M))|F}EY{I|L};[DP][WM]AQ{M(Oxidation (M))|F}EY{I|L};[DP]STTY[NP]EY{I|L} 4.4641;4.137;3.7611;3.7263;3.6552;3.434;3.2913;3.2739;3.2038;3.1094 -;-;-;+;-;-;-;-;-;- + 1427 1 1.142 98062.3 1.0 8548 5531 14068 HBL1_DMSO_200M_050219_1,14081 HBL1_DMSO_200M_050219_1,14081,AQFEPDSTEYI True True AQFEPDSTEYI 70.022348 650.290332019329 7137537.5 14068.0 ENST00000498505.5_1_3:139068252-139075853:+|nuORF;;ENST00000483545.1_1_3:139065838-139069914:+|nuORF;;ENSG00000175110|ENST00000680020|MRPS22 6.919114748636882 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14082 70.024 100.0 307420.0 25 0 32397.0 -1 VGPLMRVL 8 60 450.76995447169656 899.5253560101931 2 450.7704345583916 MULTI CID FTMS 0 0 0 14068 702901.5 0.1136671292149449 6 -0.5418777465820312 14 Oxidation (M) _VGPLM(Oxidation (M))RVL_ ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2 14.581692164780916 0.6954967302934248 3 VCV{I|L} 4 -1 36.23 0.0 0.0 4.0277 0.0 0.0 467.2873707501969 0.0 467.2873707501969 0.0 24.011459692238688 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 VCV{I|L} 4.0277 - 24 1 1.142 30870.9 1.0 8549 5531 14068 HBL1_DMSO_200M_050219_1,14082 HBL1_DMSO_200M_050219_1,14082,VGPLMRVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14083 70.027 111.0 279840.0 25 0 60748.0 + 28032 PNNVKDLL 8 59 456.7603214674763 911.5060900017526 2 456.7604247927666 MULTI CID FTMS 0 0 0 14068 537661.1875 1.0 0 0.0 15 Unmodified _PNNVKDLL_ REV__ENSG00000011566|ENST00000263881|MAP4K3;REV__ENSG00000012983|ENST00000682126|MAP4K5;REV__MAP4K3|p.H294L|1|0.42|ENSG00000011566|chr2:39325555-39325555|T/A|missense_variant;REV__nc|ENSG00000011566|Q8IVH8-2|MAP4K3;REV__nc|ENSG00000011566|Q8IVH8-3|MAP4K3 11.640296217721598 0.738950129755968 3 D{I|L}{I|L} 3 -1 31.682 0.0 0.0 3.4758 0.0 0.0 552.3040638654312 0.0 552.3040638654312 0.0 18.58349385648225 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 D{I|L}{I|L} 3.4758 + + 18 1 1.142 29682.5 1.0 8550 5531 14068 HBL1_DMSO_200M_050219_1,14083 HBL1_DMSO_200M_050219_1,14083,PNNVKDLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14084 70.028 41.0 1030800.0 25 0 115270.0 + -1 AKCCRSLFI 9 79 549.2852363066577 1096.5559196801153 2 549.2850219607353 MULTI CID FTMS 0 0 0 14068 494465.3125 0.0452357108250017 8 -0.7378997802734375 16 Carbamidomethyl (C) _AKC(Carbamidomethyl (C))CRSLFI_ REV__ENST00000550906.1_1_12:29614693-29617397:+|nuORF 11.640296217721598 0.521594087909532 3 [DV]V[TA]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}{I|L} 10 -1 + 20.414 0.0 0.0 1.8616 1.8616 71.105 0.0 0.0 0.0 2.895425552329467 4.894301701292083 2.895425552329467 3.380135619171508 0 0.6822333069283655 1.2218487496163564 0.0 0.0 [DV]V[TA]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DN[KQ]V{M(Oxidation (M))|F}{I|L};[KA]{[{M(Oxidation (M))|F}C]|[YS]}[RN]V{M(Oxidation (M))|F}{I|L};[DV]V[TA][W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DGG[KQ]V{M(Oxidation (M))|F}{I|L};[VS]V{[CP]|[EA]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}A[TA]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}{I|L} 1.8616;1.5534;1.5244;1.2659;0.71362;0.47282;0.1666 -;-;-;-;-;-;- 138 1 1.142 43402.9 1.0 8551 5531 14068 HBL1_DMSO_200M_050219_1,14084 HBL1_DMSO_200M_050219_1,14084,AKCCRSLFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14085 70.032 195.0 563590.0 25 0 42922.0 + 2822 AVAAVLTQV 9 129 436.2665291006651 870.5185052681302 2 436.2666503787041 MULTI CID FTMS 0 0 0 14068 489787.9375 1.0 0 0.0 17 Unmodified _AVAAVLTQV_ ENSG00000147955|ENST00000277010|SIGMAR1;ENST00000378892.5_1_9:34637493-34637721:-|nuORF;ENST00000497006.1_1_9:34637208-34637655:-|nuORF;nc|ENSG00000147955|Q99720-2|SIGMAR1;nc|ENSG00000147955|Q99720-3|SIGMAR1;nc|ENSG00000147955|Q99720-4|SIGMAR1;nc|ENSG00000147955|Q99720-5|SIGMAR1 56.541270873467816 0.0279970378729908 3 {[VA]|[{I|L}G]}AAV{I|L} 6 3 39.927 0.0 0.0 4.5865 0.0 0.0 0.0 343.1619128211177 343.1619128211177 21.29370928348408 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {[VA]|[{I|L}G]}AAV{I|L} 4.5865 + + 457 1 1.142 88952.3 1.0 8552 5531 14068 HBL1_DMSO_200M_050219_1,14085 HBL1_DMSO_200M_050219_1,14085,AVAAVLTQV True True AVAAVLTQV 70.031739 436.266650378704 2331715.25 14068.0 nc|ENSG00000147955|Q99720-5|SIGMAR1;;nc|ENSG00000147955|Q99720-4|SIGMAR1;;ENSG00000147955|ENST00000277010|SIGMAR1;;ENST00000497006.1_1_9:34637208-34637655:-|nuORF;;nc|ENSG00000147955|Q99720-2|SIGMAR1;;ENST00000378892.5_1_9:34637493-34637721:-|nuORF;;nc|ENSG00000147955|Q99720-3|SIGMAR1 5.043597221374512 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14086 70.039 413.0 205640.0 25 0 52967.0 -1 0 58 1120.4361766118734 0 1120.445361316204 PEAK CID FTMS 0 0 0 -1 0 18 3 YG 2 -1 10.969 0.0 0.0 0.48994 0.0 0.0 534.1225230462095 1481.6414443026322 2015.7639673488416 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.48994 - 14 + 1 1.142 73316.9 1.0 8553 5531 14068 HBL1_DMSO_200M_050219_1,14086 HBL1_DMSO_200M_050219_1,14086, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14087 70.043 212.0 466040.0 25 0 33155.0 + 24818 MPKIKMPKI 9 135 362.5571424720684 1084.6495980164052 3 362.5570556521416 MULTI CID FTMS 0 0 0 14068 400408.71875 0.9462249490649356 3 -0.2675094604492187 19 Unmodified _MPKIKMPKI_ ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK;ENSG00000124942|ENST00000378024|AHNAK 32.037481411007896 0.1235546156350648 3 MPK{I|L}KMPK{I|L} 9 0 + 54.247 0.0 0.0 5.0013 5.0013 85.181 0.0 0.0 0.0 42.257048397115625 9.393105370789598 9.393105370789598 9.542425094393252 0 0.75 0.7695510786217261 0.0 0.0 + + MPK{I|L}KMPK{I|L};MPK{I|L}KM{I|L}[KP];M{I|L}[KP]KMPK{I|L};M{I|L}[KP]KM{I|L}[KP] 5.0013;4.1215;2.7725;1.8927 +;-;-;- + 159 + 1 1.142 84535.5 1.0 8554 5531 14068 HBL1_DMSO_200M_050219_1,14087 HBL1_DMSO_200M_050219_1,14087,MPKIKMPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14088 70.052 485.0 336870.0 25 0 75242.0 -1 0 61 1176.9849478566114 2351.955342780023 2 1177.485034167767 MULTI CID FTMS 0 0 0 14068 348686.28125 1.0 0 0.0 20 3 VH[YG][C(Carbamidomethyl (C))C]T{M(Oxidation (M))|F}V[HV] 11 -1 20.437 0.0 0.0 0.86896 0.0 0.0 1031.3555028028663 0.0 1031.3555028028663 0.0 13.843667051427357 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 VH[YG][C(Carbamidomethyl (C))C]T{M(Oxidation (M))|F}V[HV] 0.86896 - 80 + 1 1.142 114645.2 1.0 8555 5531 14068 HBL1_DMSO_200M_050219_1,14088 HBL1_DMSO_200M_050219_1,14088, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14090 70.056 107.0 811310.0 25 0 211970.0 -1 TVFTDHMLTV 10 113 590.2892877063944 1178.5640224795886 2 590.2900268435478 MULTI CID FTMS 0 0 0 14089 368951.5 0.418682918768099 1 -0.1711959838867187 1 Oxidation (M) _TVFTDHM(Oxidation (M))LTV_ ENSG00000060982|ENST00000261192|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;nc|ENSG00000060982|P54687-5|BCAT1 22.736283301280096 0.4578556481593033 3 {M(Oxidation (M))|F}{I|L}TVTV 6 -1 29.759 0.0 0.0 2.525 0.0 0.0 500.2037831037125 0.0 500.2037831037125 0.0 14.397941620232595 0.0 0.0 0 0.5629529932484498 0.0 0.5 0.0 {M(Oxidation (M))|F}{I|L}TVTV 2.525 - 372 1 1.142 71155.2 1.0 8556 5532 14089 HBL1_DMSO_200M_050219_1,14090 HBL1_DMSO_200M_050219_1,14090,TVFTDHMLTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14091 70.064 458.0 195290.0 25 0 37745.0 -1 0 56 1096.7825806484386 3287.325912545516 3 1097.116503894329 MULTI CID FTMS 0 0 0 14089 103999.9921875 0.3063095022129666 1 -0.1711959838867187 2 3 RYTTV 5 -1 14.882 0.0 0.0 0.45272 0.0 0.0 2165.7659282699287 498.20078455142817 2663.966712821357 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 RYTTV 0.45272 - 168 + 1 1.142 82714.5 1.0 8557 5532 14089 HBL1_DMSO_200M_050219_1,14091 HBL1_DMSO_200M_050219_1,14091, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14092 70.065 16.0 3460500.0 25 0 412720.0 + 3700 DAFLEAAKKI 10 77 553.3157837013837 1104.6170144695673 2 553.3157836794853 MULTI CID FTMS 0 0 0 14089 2314969.0 0.4702809443164669 -2 0.1966552734375 3 Unmodified _DAFLEAAKKI_ ENSG00000119396|ENST00000373840|RAB14 43.9818466556824 0.1155196613165264 3 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}EAAKK{I|L} 10 0 + 86.661 0.0 0.0 7.8454 7.8454 96.38 0.0 0.0 0.0 69.83873864062048 10.801484959362256 10.801484959362256 28.481362441963327 0 1.75 1.5228787452803376 0.4247425010840047 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}EAAKK{I|L};W{M(Oxidation (M))|F}{I|L}[RD]KK{I|L};{I|L}[W{M(Oxidation (M))|F}][RD]KK{I|L} 7.8454;5.267;3.0049 +;-;- + 264 + 1 1.142 48207.1 1.0 8558 5532 14089 HBL1_DMSO_200M_050219_1,14092 HBL1_DMSO_200M_050219_1,14092,DAFLEAAKKI True True DAFLEAAKKI 70.065441 553.315783679485 82791256.0 14089.0 ENSG00000119396|ENST00000373840|RAB14 6.852007865905762 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14093 70.067 37.0 1453400.0 25 0 110430.0 + -1 EIDQCDLL 8 96 503.2318295443582 1004.4491061555163 2 503.2321655154228 MULTI CID FTMS 0 0 0 14089 766810.625 0.0297971723932168 17 -1.3461532592773438 4 Carbamidomethyl (C) _EIDQC(Carbamidomethyl (C))DLL_ REV__ENSG00000054654|ENST00000555002|SYNE2;REV__ENST00000394768.6_2_14:64542710-64692241:+|nuORF;REV__nc|ENSG00000054654|Q8WXH0-7|SYNE2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2 10.183394434864962 0.7604730176254005 3 {I|L}{I|L}Q 3 -1 16.655 0.0 0.0 1.6582 0.0 0.0 0.0 647.1995388549883 647.1995388549883 4.436974992327126 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}Q 1.6582 - 38 1 1.142 44446.3 1.0 8559 5532 14089 HBL1_DMSO_200M_050219_1,14093 HBL1_DMSO_200M_050219_1,14093,EIDQCDLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14094 70.068 59.0 1211600.0 25 0 88999.0 39638 VDVFREDLC 9 106 548.261850486333 1094.5091480394658 2 548.2628661990166 MULTI CID FTMS 0 0 0 14089 347320.8125 0.1709516453755902 -2 0.1966552734375 5 Unmodified _VDVFREDLC_ chr14:24136498-24136985|20|12.85|0.55|4.54|+|0|None,PSME1|1;chr14:24136569-24136985|13|10.54|0.49|4.43|+|0|None,PSME1|1;chr14:24136860-24136985|12|14.75|0.21|6.14|+|0|None,PSME1|1;ENSG00000092010|ENST00000206451|PSME1;ENST00000561059.5_1_14:24605441-24606295:+|nuORF;ENST00000561142.5_1_14:24605441-24607359:+|nuORF;nc|ENSG00000092010|Q06323-2|PSME1;nc|ENSG00000092010|Q06323-3|PSME1 21.74664581756881 0.2544899275067181 3 [DV]V{M(Oxidation (M))|F} 4 5 27.413 0.0 0.0 2.5046 0.0 0.0 0.0 631.2540265397189 631.2540265397189 -3.744551116640004 0.0 -3.744551116640004 0.0 0 0.0 1.5228787452803376 0.2887254899964357 0.0 + [DV]V{M(Oxidation (M))|F} 2.5046 + + 271 1 1.142 60480.4 1.0 8560 5532 14089 HBL1_DMSO_200M_050219_1,14094 HBL1_DMSO_200M_050219_1,14094,VDVFREDLC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14095 70.076 439.0 952030.0 25 0 129220.0 + 29573 QLREAFEQL 9 254 567.3012500817689 1132.5879472303377 2 567.3017455935478 MULTI CID FTMS 0 0 0 14089 289903.1875 0.1758473193170084 -2 0.1966552734375 6 Unmodified _QLREAFEQL_ ENSG00000122952|ENST00000373944|ZWINT;nc|ENSG00000122952|O95229-2|ZWINT 103.35351024395868 0.0092202910191236 3 [Q{I|L}]ERA{M(Oxidation (M))|F}EQ{I|L} 9 2 + 87.381 0.0 0.0 7.7152 7.7152 90.585 0.0 0.0 0.0 7.381805439553659 14.973024840566438 7.381805439553659 7.381805439553659 0 0.841129063296272 0.744727494896694 1.4291746928241125 2.538106835214472 [Q{I|L}]ERA{M(Oxidation (M))|F}EQ{I|L};[AG]{I|L}ERA{M(Oxidation (M))|F}EQ{I|L};{[QN]|[E{I|L}]|[KN]}QRA{M(Oxidation (M))|F}EQ{I|L};[Q{I|L}]ERA{M(Oxidation (M))|F}E[AG]{I|L};{[QN]|[E{I|L}]|[KN]}QQV{M(Oxidation (M))|F}EQ{I|L};[Q{I|L}]ERAE{M(Oxidation (M))|F}Q{I|L};[AG]E{I|L}RA{M(Oxidation (M))|F}EQ{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}RA{M(Oxidation (M))|F}EQ{I|L};[Q{I|L}]M[KP]{M(Oxidation (M))|F}EQ{I|L};[AG]{I|L}ERA{M(Oxidation (M))|F}E[AG]{I|L} 7.7152;7.0634;6.9634;6.9021;6.6689;6.595;6.4913;6.4527;6.3864;6.2542 -;-;-;-;-;-;-;-;-;- 7856 1 1.142 310277.9 1.0 8561 5532 14089 HBL1_DMSO_200M_050219_1,14095 HBL1_DMSO_200M_050219_1,14095,QLREAFEQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14096 70.085 534.0 101300.0 25 0 27850.0 -1 0 42 1127.7606558825378 0 1127.760668933392 PEAK CID FTMS 0 0 0 14089 250067.9375 1.0 0 0.0 7 3 NE 2 -1 8.5835 0.0 0.0 0.38089 0.0 0.0 1144.0036593219131 863.3687376938765 2007.3723970157896 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NE 0.38089 - 23 + 1 1.142 44926.0 1.0 8562 5532 14089 HBL1_DMSO_200M_050219_1,14096 HBL1_DMSO_200M_050219_1,14096, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14097 70.094 472.0 157250.0 25 0 22035.0 + -1 NDTCFCACRCF 11 93 755.7733537145803 1509.5321544959604 2 756.2764770388603 MULTI CID FTMS 0 0 0 14089 235669.921875 1.0 0 0.0 8 4 Carbamidomethyl (C) _NDTC(Carbamidomethyl (C))FC(Carbamidomethyl (C))AC(Carbamidomethyl (C))RC(Carbamidomethyl (C))F_ REV__ENSG00000111325|ENST00000228922|OGFOD2;REV__ENST00000420319.6_1_12:123459798-123461705:+|nuORF;REV__ENST00000545396.5_1_12:123459798-123462874:+|nuORF;REV__nc|ENSG00000111325|Q6N063-3|OGFOD2 1.1933415558491238 0.8695176722560516 3 [DN]{M(Oxidation (M))|F}VY 5 -1 27.249 0.0 0.0 1.8052 0.0 0.0 0.0 868.2388555059791 868.2388555059791 7.072034164243561 0.0 0.0 0.0 0 0.0 0.0 0.5866968715561641 0.3054621874040891 [DN]{M(Oxidation (M))|F}VY 1.8052 - 205 1 1.142 58009.4 1.0 8563 5532 14089 HBL1_DMSO_200M_050219_1,14097 HBL1_DMSO_200M_050219_1,14097,NDTCFCACRCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14098 70.104 594.0 315850.0 25 0 107120.0 + -1 DLPVSSCT 8 130 439.7002857651603 877.3860185971206 2 439.7005187869072 MULTI CID FTMS 0 0 0 14089 236278.46875 1.0 0 0.0 9 Carbamidomethyl (C) _DLPVSSC(Carbamidomethyl (C))T_ REV__ENST00000462495.1_1_3:133486931-133489451:+|nuORF 12.531546534597751 0.7257836412119636 3 D{I|L} 2 -1 20.969 0.0 0.0 2.39 0.0 0.0 0.0 646.2520967311362 646.2520967311362 4.247425010840047 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L} 2.39 + + 116 + 1 1.142 149287.7 1.0 8564 5532 14089 HBL1_DMSO_200M_050219_1,14098 HBL1_DMSO_200M_050219_1,14098,DLPVSSCT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14099 70.115 598.0 253510.0 25 0 49793.0 -1 0 82 1163.8364476084344 3488.4875134255035 3 1164.507617175579 MULTI CID FTMS 0 0 0 14089 193213.71875 0.3095302247138811 -1 0.0555343627929687 10 3 Y{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}C(Carbamidomethyl (C))YYG[HQ]T 11 -1 25.468 0.0 0.0 0.73007 0.0 0.0 946.3370562341288 1117.6111544244752 2063.948210658604 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.3252574989159953 Y{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}C(Carbamidomethyl (C))YYG[HQ]T 0.73007 - 346 + 1 1.142 122517.5 1.0 8565 5532 14089 HBL1_DMSO_200M_050219_1,14099 HBL1_DMSO_200M_050219_1,14099, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14100 70.123 498.0 69917.0 25 0 4502.8 + -1 PDPWCECMRDL 11 73 747.7920707935016 0 747.7923461794853 PEAK CID FTMS 0 0 0 14089 185173.53125 1.0 0 0.0 11 2 Carbamidomethyl (C),Oxidation (M) _PDPWC(Carbamidomethyl (C))EC(Carbamidomethyl (C))M(Oxidation (M))RDL_ REV__ENST00000469556.1_1_1:24122614-24123094:-|nuORF 1.3295316138638542 0.4761840153648598 3 A{I|L}D 3 -1 13.188 0.0 0.0 0.88296 0.0 0.0 968.326620979778 223.07317529849848 1191.3997962782769 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}D 0.88296 - 60 + 1 1.142 33060.1 1.0 8566 5532 14089 HBL1_DMSO_200M_050219_1,14100 HBL1_DMSO_200M_050219_1,14100,PDPWCECMRDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14101 70.135 616.0 69649.0 25 0 28994.0 -1 0 39 1132.748828113079 0 1132.748828113079 PEAK CID FTMS 0 0 0 -1 0 12 3 EN 2 -1 10.969 0.0 0.0 0.48461 0.0 0.0 1392.017174193152 625.3562716119749 2017.3734458051267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EN 0.48461 - 36 + 1 1.142 39144.7 1.0 8567 5532 14089 HBL1_DMSO_200M_050219_1,14101 HBL1_DMSO_200M_050219_1,14101, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14102 70.146 618.0 238610.0 25 0 10409.0 -1 0 126 908.426222839542 1814.837892745884 2 908.4308349490166 MULTI CID FTMS 0 0 0 14089 134092.125 0.4382764729704954 1 -0.1711959838867187 13 3 [MN]PN{I|L}NEAQ[HV]EN{I|L} 14 -1 84.054 0.0 0.0 4.6315 0.0 0.0 0.0 208.0729921930297 208.0729921930297 51.37115607243571 0.0 0.0 0.0 0 1.3411290632962718 1.5228787452803376 0.3807196863200844 1.7051120522087029 [MN]PN{I|L}NEAQ[HV]EN{I|L} 4.6315 - 3762 + 1 1.142 98888.3 1.0 8568 5532 14089 HBL1_DMSO_200M_050219_1,14102 HBL1_DMSO_200M_050219_1,14102, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14103 70.158 675.0 194040.0 25 0 33938.0 + -1 LQEGTYVMV 9 113 1038.7795066317776 3113.3166904955333 3 1039.442675769329 MULTI CID FTMS 0 0 0 14089 134241.15625 0.8361840438527226 1 -0.1711959838867187 14 ENSG00000198805|ENST00000361505|PNP;ENST00000554056.5_1_14:20942916-20944757:+|nuORF;ENST00000556754.1_1_14:20943209-20944757:+|nuORF 3 TETAQ{[WS]|[C(Carbamidomethyl (C)){I|L}]} 7 -1 30.574 0.0 0.0 0.98205 0.0 0.0 2291.9414596379147 0.0 2291.9414596379147 0.0 1.712571493103198 0.0 0.0 0 0.0 0.0 0.5796896906561032 1.4634679910804405 TETAQ{[WS]|[C(Carbamidomethyl (C)){I|L}]} 0.98205 - 5766 + 1 1.142 87541.1 1.0 8569 5532 14089 HBL1_DMSO_200M_050219_1,14103 HBL1_DMSO_200M_050219_1,14103, False False LQEGTYVMV 70.157999 1039.44267576933 3685722.0 14089.0 ENSG00000198805|ENST00000361505|PNP;;ENST00000554056.5_1_14:20942916-20944757:+|nuORF;;ENST00000556754.1_1_14:20943209-20944757:+|nuORF -0.199340283870697 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14104 70.17 612.0 194110.0 25 0 12249.0 + 23302 LTAALVCCHE 10 165 587.2741174266739 1172.5336819201475 2 587.2761718630791 MULTI CID FTMS 0 0 0 14089 109293.625 1.0 0 0.0 15 2 Carbamidomethyl (C) _LTAALVC(Carbamidomethyl (C))C(Carbamidomethyl (C))HE_ REV__ENST00000406420.7_1_2:24239147-24246476:+|nuORF 43.85829265575387 0.1168243637355526 3 [VS]VSY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{M(Oxidation (M))|F} 10 -1 + 62.374 0.0 0.0 5.3196 5.3196 82.705 0.0 0.0 0.0 10.791812460476253 6.545508645476062 6.545508645476062 6.545508645476062 0 0.9247425010840048 2.0 0.3807196863200844 0.4247425010840047 [VS]VSY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{M(Oxidation (M))|F};[VS]VSY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[MN]{I|L};[VS]VSY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QMV;[VS]VSY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{M(Oxidation (M))|F};[VS]VS{[SA]|[TG]}{[YC]|[HE]}PN{M(Oxidation (M))|F};[VS]VSYW[DG]N{M(Oxidation (M))|F};[VS]VSY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EPV;[VS]VSY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EVP;{I|L}TASY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{M(Oxidation (M))|F};[VS]VS{[SA]|[TG]}H[C(Carbamidomethyl (C))N]NV 5.3196;4.7613;4.6919;4.5743;4.538;4.4667;4.3274;4.2208;4.1627;4.0614 -;-;-;-;-;-;-;-;-;- 1381 + 1 1.142 92989.6 1.0 8570 5532 14089 HBL1_DMSO_200M_050219_1,14104 HBL1_DMSO_200M_050219_1,14104,LTAALVCCHE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14105 70.181 617.0 162390.0 25 0 12251.0 -1 0 105 893.9124865680878 1785.8104202029756 2 893.9113647341728 MULTI CID FTMS 0 0 0 14089 104334.328125 0.5045619831938031 1 -0.1711959838867187 16 3 [MN]PN{I|L}NEEQAA[WE]{I|L}Q 15 -1 + 67.356 0.0 0.0 3.7718 3.7718 71.892 0.0 0.0 0.0 30.924778212679485 4.876750844102773 4.876750844102773 1.9188552623891293 0 0.8556270500406937 1.5228787452803376 0.0 0.7742275032520141 [MN]PN{I|L}NEEQAA[WE]{I|L}Q;[MN]PN{I|L}NEE[RN][WE]{I|L}Q;[MN]PN{I|L}NEK[{M(Oxidation (M))|F}E][Y{M(Oxidation (M))|F}]{I|L}Q;[NP]G{I|L}GE{[YD]|[{M(Oxidation (M))|F}M]}KEN{I|L}NV[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}VN{I|L}NEEQAA[WE]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGGE{[YD]|[{M(Oxidation (M))|F}M]}KEN{I|L}NV[QP];[NP]G{I|L}GM[{M(Oxidation (M))|F}E]KEN{I|L}NV[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}VN{I|L}NEE[RN][WE]{I|L}Q;[NP]{I|L}GGE{[YD]|[{M(Oxidation (M))|F}M]}KEN{I|L}NV[QP];{[QV]|[N{I|L}]|[RA]|[KV]}PGGM[{M(Oxidation (M))|F}E]KEN{I|L}NV[QP] 3.7718;3.6643;3.1146;2.2987;2.2429;2.2425;2.1779;2.1355;2.1301;2.1217 -;-;-;-;-;-;-;-;-;- 1850 + 1 1.142 76040.7 1.0 8571 5532 14089 HBL1_DMSO_200M_050219_1,14105 HBL1_DMSO_200M_050219_1,14105, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14106 70.194 800.0 330610.0 25 0 18012.0 + 44921 YPPPVDPKKLI 11 185 422.92016952020526 1265.7386791608158 3 422.9201537966728 MULTI CID FTMS 0 0 0 14089 107237.203125 0.3283619757769697 7 -0.6823654174804688 17 Unmodified _YPPPVDPKKLI_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 30.354368406336206 0.3794727900792232 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPVDPKK{I|L}{I|L} 11 0 + 45.959 0.0 0.0 3.631 3.631 84.304 0.0 0.0 0.0 13.888441264691984 3.787535118007064 3.787535118007064 45.95870268532924 0 0.7302046884880937 2.0 0.0 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPVDPKK{I|L}{I|L} 3.631 + + 530 + 1 1.142 208643.8 0.949999988079071 8572 5532 14089 HBL1_DMSO_200M_050219_1,14106 HBL1_DMSO_200M_050219_1,14106,YPPPVDPKKLI False True YPPPVDPKKLI 70.194486 422.920153796673 5524972.5 14089.0 ENST00000524933.1_1_11:13716477-13732426:+|nuORF;;ENSG00000197601|ENST00000354817|FAR1 3.6637446085611978 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14107 70.198 93.0 481310.0 25 0 51836.0 -1 IDTALCFLQ 9 84 540.7733988398303 1079.5322447464605 2 541.2727538943291 MULTI CID FTMS 0 0 0 14089 104191.859375 0.2940542841713779 1 -0.1711959838867187 18 Carbamidomethyl (C) _IDTALC(Carbamidomethyl (C))FLQ_ ENST00000559350.5_1_15:60678227-60682440:-|nuORF 20.453626601364224 0.2830276176381075 3 {I|L}Q 2 -1 21.682 0.0 0.0 2.0085 0.0 0.0 820.3793649630605 0.0 820.3793649630605 0.0 8.187587626244124 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 {I|L}Q 2.0085 + + 106 + 1 1.142 42276.5 1.0 8573 5532 14089 HBL1_DMSO_200M_050219_1,14107 HBL1_DMSO_200M_050219_1,14107,IDTALCFLQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14108 70.211 790.0 76611.0 25 0 7695.1 -1 0 88 1046.439868152142 0 1046.439868152142 PEAK CID FTMS 0 0 0 -1 0 19 3 VVVV 4 -1 13.047 0.0 0.0 0.62402 0.0 0.0 1180.3546986072154 511.2149752252562 1691.5696738324716 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VVVV 0.62402 - 325 + 1 1.142 45459.1 1.0 8574 5532 14089 HBL1_DMSO_200M_050219_1,14108 HBL1_DMSO_200M_050219_1,14108, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14109 70.223 662.0 154910.0 25 0 7333.4 + 2463 AQWEVERAEL 10 161 615.8090933458149 1229.6036337584296 2 615.8089477419853 MULTI CID FTMS 0 0 0 14089 100196.8359375 0.7354755676150688 1 -0.1711959838867187 20 Unmodified _AQWEVERAEL_ ENSG00000115808|ENST00000263918|STRN;nc|ENSG00000115808|O43815-2|STRN 27.22323531849824 0.3570408936368626 3 [QA]WEVE 6 4 44.926 0.0 0.0 3.6537 0.0 0.0 0.0 484.25312219791255 484.25312219791255 31.70542903602854 0.0 0.0 0.0 0 1.0 0.6777807052660807 0.4247425010840047 0.0 + [QA]WEVE 3.6537 + + 1390 + 1 1.142 79017.2 1.0 8575 5532 14089 HBL1_DMSO_200M_050219_1,14109 HBL1_DMSO_200M_050219_1,14109,AQWEVERAEL False True AQWEVERAEL 70.222924 615.808947741985 1125056.375 14089.0 ENSG00000115808|ENST00000263918|STRN;;nc|ENSG00000115808|O43815-2|STRN 6.0814588864644366 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14111 70.227 5.9 5387300.0 25 0 1506000.0 + 27340 PHSSPLALL 9 57 467.7714589396702 933.5283649461404 2 467.7716552615166 MULTI CID FTMS 0 0 0 14110 9119047.0 0.2851595825352773 2 -0.1739120483398437 1 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 30.22481116460888 0.1466181017706357 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 9 4 + 39.555 0.0 0.0 4.2372 4.2372 85.823 0.0 0.0 0.0 5.6424927368726046 24.07067783193932 5.6424927368726046 39.5552278969796 0 0.5 0.0 1.1421590589602533 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 4.2372 - 40 1 1.183 32624.7 1.0 8576 5533 14110 HBL1_DMSO_200M_050219_1,14111 HBL1_DMSO_200M_050219_1,14111,PHSSPLALL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14112 70.228 15.0 3921700.0 25 0 536910.0 21071 LPAGGILVF 9 77 443.7734510303929 885.5323491275858 2 443.7735778689384 MULTI CID FTMS 0 0 0 14110 4130275.75 0.2416717318772052 17 -1.3022232055664062 2 Unmodified _LPAGGILVF_ ENSG00000150990|ENST00000308736|DHX37 20.871210003555333 0.2717241269066626 3 {I|L}P 2 7 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3720824803344 672.3720824803344 15.021890713348752 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 137 + 1 1.183 50009.4 1.0 8577 5533 14110 HBL1_DMSO_200M_050219_1,14112 HBL1_DMSO_200M_050219_1,14112,LPAGGILVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14113 70.23 15.0 3020200.0 25 0 283370.0 + 26181 NQFPGFKEV 9 75 533.2720326860506 1064.529512438901 2 533.2716552615166 MULTI CID FTMS 0 0 0 14110 2965007.75 0.079799230236837 7 -0.5647964477539062 3 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 36.506200033944 0.094635877243972 3 SK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 7 7 38.02 0.0 0.0 3.5715 0.0 0.0 214.1071034162125 0.0 214.1071034162125 0.0 28.52137288525008 0.0 0.0 0 1.0 0.0 0.805462187404089 0.0 SK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 3.5715 - 235 1 1.183 40549.2 1.0 8578 5533 14110 HBL1_DMSO_200M_050219_1,14113 HBL1_DMSO_200M_050219_1,14113,NQFPGFKEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14114 70.231 81.0 2093800.0 25 0 488050.0 -1 0 58 1107.1136702808817 3318.319181442845 3 1107.782519519329 MULTI CID FTMS 0 0 0 14110 2351728.0 0.4731276378231639 2 -0.1739120483398437 4 3 GYC 3 -1 9.2082 0.0 0.0 0.2775 0.0 0.0 1944.6758299902376 1047.50209409317 2992.177924083408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYC 0.2775 - 20 + 1 1.183 151126.3 1.0 8579 5533 14110 HBL1_DMSO_200M_050219_1,14114 HBL1_DMSO_200M_050219_1,14114, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14115 70.233 19.0 5534400.0 25 0 582300.0 + 37123 TGYLNTVTV 9 115 484.25839615362605 966.502239374052 2 484.2589599490166 MULTI CID FTMS 0 0 0 14110 2280402.25 0.0053883241897314 38 -3.1748199462890625 5 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 46.020951573049366 0.0490941689151868 3 {[TV]|[{I|L}S]}QYGT 6 7 41.493 0.0 0.0 4.2931 0.0 0.0 0.0 314.1710985871959 314.1710985871959 20.06630082558985 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.4489700043360187 0.6747425010840047 {[TV]|[{I|L}S]}QYGT 4.2931 - 1716 1 1.183 79989.0 1.0 8580 5533 14110 HBL1_DMSO_200M_050219_1,14115 HBL1_DMSO_200M_050219_1,14115,TGYLNTVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14116 70.234 22.0 3281300.0 25 0 289420.0 -1 VMAPRTVLL 9 104 508.3018749554447 0 508.3017150759697 PEAK CID FTMS 0 0 0 14110 1975459.875 0.384518635371995 2 -0.1739120483398437 6 Oxidation (M) _VM(Oxidation (M))APRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 20.41453444215458 0.197313647343139 3 DA 2 -1 20.573 0.0 0.0 2.0277 0.0 0.0 131.09366582710192 694.4258578358581 825.51952366296 0.0 0.0 0.0 0.0 0 1.110924374808178 0.0 0.0 0.0 DA 2.0277 - 82 + 1 1.183 60474.9 1.0 8581 5533 14110 HBL1_DMSO_200M_050219_1,14116 HBL1_DMSO_200M_050219_1,14116,VMAPRTVLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14117 70.235 33.0 1730500.0 25 0 214730.0 + 39373 VAHQQLIQI 9 82 525.3095752952198 1048.6045976572395 2 525.3097411990166 MULTI CID FTMS 0 0 0 14110 1566137.0 0.1689754177379105 2 -0.1739120483398437 7 Unmodified _VAHQQLIQI_ ENSG00000167986|ENST00000301764|DDB1 34.10243960390752 0.1078313939113124 3 QQ{I|L}{I|L}Q{I|L} 6 3 34.966 0.0 0.0 3.3345 0.0 0.0 307.16499526191564 0.0 307.16499526191564 0.0 20.361753205006607 0.0 0.0 0 0.6237125054200234 0.0 0.0 0.3807196863200844 + QQ{I|L}{I|L}Q{I|L} 3.3345 + + 148 1 1.183 49736.4 1.0 8582 5533 14110 HBL1_DMSO_200M_050219_1,14117 HBL1_DMSO_200M_050219_1,14117,VAHQQLIQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14118 70.236 50.0 2307700.0 25 0 285810.0 -1 0 82 320.211539464139 319.204262997539 1 320.2112609744072 MULTI CID FTMS 0 0 0 14110 1562396.25 0.2318538910374618 12 -0.9627456665039062 8 3 P{I|L} 2 -1 36.669 0.0 0.0 11.488 0.0 0.0 0.0 106.0415514581664 106.0415514581664 0.6998499381268957 0.0 0.0 0.0 0 0.5866968715561641 1.6989700043360187 0.0 0.0 P{I|L} 11.488 - 13 + 1 1.183 96480.3 1.0 8583 5533 14110 HBL1_DMSO_200M_050219_1,14118 HBL1_DMSO_200M_050219_1,14118, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14119 70.239 105.0 1596100.0 25 0 408840.0 -1 0 55 1066.095663410906 3195.265160832919 3 1066.430712878704 MULTI CID FTMS 0 0 0 14110 1473516.875 0.0972625653907517 -3 0.3678512573242187 9 3 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYG[WY]S 8 -1 16.744 0.0 0.0 0.52403 0.0 0.0 1020.3569099557684 1045.4829805963502 2065.8398905521185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYG[WY]S 0.52403 - 127 + 1 1.183 153453.5 1.0 8584 5533 14110 HBL1_DMSO_200M_050219_1,14119 HBL1_DMSO_200M_050219_1,14119, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14120 70.24 39.0 929530.0 25 0 70211.0 + 17131 KLHEYFPEM 9 66 597.2868169635078 1192.5590809938155 2 597.2875244021416 MULTI CID FTMS 0 0 0 14110 1192274.5 0.3024203594663586 2 -0.1739120483398437 10 Unmodified _KLHEYFPEM_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 51.629811660486645 0.0367964933207742 3 [EP]M[KG]K{M(Oxidation (M))|F}PEM 10 6 + 79.2 0.0 0.0 6.6412 6.6412 88.843 0.0 0.0 0.0 9.030899869919438 16.53212513775344 9.030899869919438 9.030899869919438 0 1.8807196863200843 1.5228787452803376 0.3252574989159953 0.3494850021680094 [EP]M[KG]K{M(Oxidation (M))|F}PEM;{[YC]|[HE]}Y{I|L}K{M(Oxidation (M))|F}PEM;[EP]M[KG]KP{M(Oxidation (M))|F}EM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[KG]K{M(Oxidation (M))|F}PEM;[TP]{[QC]|[C(Carbamidomethyl (C))A]}{I|L}K{M(Oxidation (M))|F}PEM;{[YC]|[HE]}Y{I|L}KP{M(Oxidation (M))|F}EM;{[YC]|[HE]}Y{M(Oxidation (M))|F}[K{I|L}]PEM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[KG]KP{M(Oxidation (M))|F}EM;[TP]{[QC]|[C(Carbamidomethyl (C))A]}{I|L}KP{M(Oxidation (M))|F}EM;{[YD]|[{M(Oxidation (M))|F}M]}P[NS][K{I|L}]PEM 6.6412;5.8839;5.6561;4.9641;4.9641;4.8988;4.4784;3.979;3.979;3.748 -;-;-;-;-;-;-;-;-;- 195 1 1.183 33836.0 1.0 8585 5533 14110 HBL1_DMSO_200M_050219_1,14120 HBL1_DMSO_200M_050219_1,14120,KLHEYFPEM True True KLHEYFPEM 70.239821 597.287524402142 63461283.0 14110.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 8.934759934743246 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14121 70.241 48.0 1141900.0 25 0 127250.0 + 19347 LEPAAWRL 8 94 478.2697038225996 954.5248547119992 2 478.2693359255791 MULTI CID FTMS 0 0 0 14110 938417.1875 0.3365464445491251 2 -0.1739120483398437 11 Unmodified _LEPAAWRL_ REV__ENSG00000142235|ENST00000600059|LMTK3 5.230669730166228 0.792582437072536 3 V 1 -1 11.259 0.0 0.0 1.1795 0.0 0.0 837.4453620745953 0.0 837.4453620745953 0.0 0.1498161168872158 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1795 - 63 + 1 1.183 47050.5 1.0 8586 5533 14110 HBL1_DMSO_200M_050219_1,14121 HBL1_DMSO_200M_050219_1,14121,LEPAAWRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14122 70.242 39.0 1325500.0 25 0 189890.0 + + -1 NPYEMIRGV 9 88 539.7199545810788 1077.4253562289575 2 539.7206298708916 MULTI CID FTMS 0 0 0 14110 898069.5 0.2636374484746833 2 -0.1739120483398437 12 2 Carbamidomethyl (C) _GYSC(Carbamidomethyl (C))YVC(Carbamidomethyl (C))GL_ ENSG00000137200|ENST00000373451|CMTR1 12.531546534597751 0.4974689918368763 3 [YV]RREY 6 -1 26.132 0.0 0.0 2.4254 0.0 0.0 0.0 207.97119906533888 207.97119906533888 13.913187455970544 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 [YV]RREY 2.4254 - 109 1 1.183 47093.4 1.0 8587 5533 14110 HBL1_DMSO_200M_050219_1,14122 HBL1_DMSO_200M_050219_1,14122,GYSCYVCGL False False NPYEMIRGV 70.242294 539.720629870892 9494228.0 14110.0 ENSG00000137200|ENST00000373451|CMTR1 0.4214780479669571 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14123 70.244 63.0 779830.0 25 0 98050.0 + -1 GSCEICTLIGL 11 67 611.7939056639403 1221.5732583946806 2 611.7942993044853 MULTI CID FTMS 0 0 0 14110 899527.9375 0.271112207431318 2 -0.1739120483398437 13 2 Carbamidomethyl (C) _GSC(Carbamidomethyl (C))EIC(Carbamidomethyl (C))TLIGL_ REV__ENSG00000151693|ENST00000281419|ASAP2;REV__ENSG00000153317|ENST00000518721|ASAP1;REV__nc|ENSG00000151693|O43150-2|ASAP2;REV__nc|ENSG00000153317|Q9ULH1-2|ASAP1 13.042465956692816 0.7638483625850725 3 {[QS]|[NT]}AD{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}V{I|L}{[VA]|[{I|L}G]} 11 -1 + 37.695 0.0 0.0 3.0858 3.0858 81.588 0.0 0.0 0.0 5.862435673934282 28.231235680268625 5.862435673934282 16.977437731477426 0 0.5 0.0 0.8494850021680094 0.0 {[QS]|[NT]}AD{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}V{I|L}{[VA]|[{I|L}G]};{[QS]|[NT]}AD{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}[{M(Oxidation (M))|F}V]{[VA]|[{I|L}G]} 3.0858;1.696 -;- 95 1 1.183 43814.4 1.0 8588 5533 14110 HBL1_DMSO_200M_050219_1,14123 HBL1_DMSO_200M_050219_1,14123,GSCEICTLIGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14124 70.246 85.0 1429300.0 25 0 368320.0 -1 ISCSNHYNSV 10 124 590.7541019652227 1179.4936509972454 2 590.7548095583916 MULTI CID FTMS 0 0 0 14110 768058.25 0.8138933671264206 -1 0.1711959838867187 14 Carbamidomethyl (C) _ISC(Carbamidomethyl (C))SNHYNSV_ ENSG00000110422|ENST00000303296|HIPK3;nc|ENSG00000110422|Q9H422-2|HIPK3 17.11289562659939 0.5604042439455784 3 {[TV]|[{I|L}S]}Y[C(Carbamidomethyl (C))C]Y{I|L}C(Carbamidomethyl (C)) 8 -1 31.872 0.0 0.0 2.7022 0.0 0.0 0.0 114.05655084781483 114.05655084781483 2.928833987635634 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}Y[C(Carbamidomethyl (C))C]Y{I|L}C(Carbamidomethyl (C)) 2.7022 - 834 + 1 1.183 96555.4 1.0 8589 5533 14110 HBL1_DMSO_200M_050219_1,14124 HBL1_DMSO_200M_050219_1,14124,ISCSNHYNSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14125 70.247 41.0 2535100.0 25 0 248380.0 28817 QAAFPSSQL 9 130 474.74309989798377 947.4716468627676 2 474.7429382205009 MULTI CID FTMS 0 0 0 14110 705112.75 0.5551095816766766 -4 0.3996505737304687 15 Unmodified _QAAFPSSQL_ ENSG00000150347|ENST00000279873|ARID5B;nc|ENSG00000150347|Q14865-2|ARID5B 32.30548876998284 0.1201446275138228 3 [QA]A{M(Oxidation (M))|F}EV 6 5 28.267 0.0 0.0 2.9835 0.0 0.0 0.0 299.1361725798176 299.1361725798176 10.655075724862256 0.0 0.0 0.0 0 0.3494850021680094 0.5528419686577808 0.0 1.0114393726401687 [QA]A{M(Oxidation (M))|F}EV 2.9835 - 550 1 1.183 85147.8 1.0 8590 5533 14110 HBL1_DMSO_200M_050219_1,14125 HBL1_DMSO_200M_050219_1,14125,QAAFPSSQL True True AQAPSSFQL 70.246948 474.742938220501 31528142.0 14110.0 ENSG00000100714|ENST00000652337|MTHFD1 4.868267854054769 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14126 70.25 157.0 367940.0 25 0 48965.0 -1 NMEPYCCRETL 11 87 736.8005359272519 1471.5865189213037 2 736.8013183474541 MULTI CID FTMS 0 0 0 14110 603841.5625 0.2326288924999489 2 -0.1739120483398437 16 2 Carbamidomethyl (C) _NMEPYC(Carbamidomethyl (C))C(Carbamidomethyl (C))RETL_ ENSG00000136014|ENST00000258499|USP44 3.2813086475875832 0.8596665074481906 3 {[QS]|[NT]}[YC(Carbamidomethyl (C))][NG]DENTAT{I|L} 13 -1 {[QS]|[NT]}[YC(Carbamidomethyl (C))][NG]DENTA + + 24.776 5.1682 0.41698 1.6836 1.6836 48.632 0.0 0.0 0.0 0.0 1.1826342446295968 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {[QS]|[NT]}[YC(Carbamidomethyl (C))][NG]DENTAT{I|L} 1.6836 - 210 + 1 1.183 48676.2 1.0 8591 5533 14110 HBL1_DMSO_200M_050219_1,14126 HBL1_DMSO_200M_050219_1,14126,NMEPYCCRETL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14127 70.251 50.0 657380.0 25 0 44623.0 + 23439 LTFFFLTV 8 79 494.2829219013761 986.5512908695522 2 494.2819396853447 MULTI CID FTMS 0 0 0 14110 591801.4375 0.2885057747937095 2 -0.1739120483398437 17 Unmodified _LTFFFLTV_ REV__ENST00000317114.1_1_18:3596827-3597223:+|nuORF 5.760428011301431 0.7893668129297577 3 V 1 -1 11.99 0.0 0.0 1.2153 0.0 0.0 869.4720194845897 0.0 869.4720194845897 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2153 + + 48 + 1 1.183 31362.2 1.0 8592 5533 14110 HBL1_DMSO_200M_050219_1,14127 HBL1_DMSO_200M_050219_1,14127,LTFFFLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14128 70.253 95.0 375860.0 25 0 31768.0 3540 CVWCHLEVSL 10 60 594.7811644709559 1187.5477760087117 2 594.7812988162041 MULTI CID FTMS 0 0 0 14110 487381.625 0.1483511595812163 2 -0.1739120483398437 18 Unmodified _CVWCHLEVSL_ ENST00000552652.2_1_12:56333995-56334415:+|nuORF 10.073929032068715 0.6785112666868882 3 V[DP][WR]S{I|L} 7 7 28.046 0.0 0.0 2.3617 0.0 0.0 316.10515655544845 0.0 316.10515655544845 0.0 23.44167267478348 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.3807196863200844 V[DP][WR]S{I|L} 2.3617 - 37 + 1 1.183 35391.2 1.0 8593 5533 14110 HBL1_DMSO_200M_050219_1,14128 HBL1_DMSO_200M_050219_1,14128,CVWCHLEVSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14129 70.255 83.0 1075900.0 25 0 90385.0 + 10537 FVDPNGKISL 10 129 545.300390678219 1088.5862284232378 2 545.2988769412041 MULTI CID FTMS 0 0 0 14110 378400.59375 0.021670804601236 7 -0.5647964477539062 19 Unmodified _FVDPNGKISL_ ENSG00000107862|ENST00000369983|GBF1;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1 29.84058131909904 0.2982332456971691 3 [{M(Oxidation (M))|F}V]D 3 7 28.729 0.0 0.0 2.6391 0.0 0.0 0.0 724.4006564840378 724.4006564840378 16.73902187720806 0.0 0.0 0.0 0 0.8807196863200843 1.3979400086720375 0.0 0.0 + [{M(Oxidation (M))|F}V]D 2.6391 + + 335 1 1.183 72269.2 1.0 8594 5533 14110 HBL1_DMSO_200M_050219_1,14129 HBL1_DMSO_200M_050219_1,14129,FVDPNGKISL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14130 70.264 473.0 377700.0 25 0 17992.0 + 43560 WYQRVYQSL 9 177 621.8166671959714 1241.618781458743 2 621.8166381716728 MULTI CID FTMS 0 0 0 14110 400770.5625 0.1748369671672367 2 -0.1739120483398437 20 Unmodified _WYQRVYQSL_ ENSG00000126267|ENST00000649813|COX6B1 158.20266083822983 0.0012842422419214 3 [{I|L}T]NYAAVYQS{I|L} 11 5 + 54.755 0.0 0.0 4.41 4.41 79.416 0.0 0.0 0.0 1.7434324599162565 2.4733280483821005 1.7434324599162565 6.377268672201453 0 0.9564608101803797 2.0 0.0 1.5303695511246984 [{I|L}T]NYAAVYQS{I|L};[{I|L}T]NYAAVYTN{I|L};[{I|L}T]NYAAVY[AG]S{I|L};[Y{I|L}]Y{[HG]|PP}VYQS{I|L};[{I|L}T]NY[Q{I|L}]YQS{I|L};[Y{I|L}]Y[RH]YQS{I|L};{[TV]|[{I|L}S]}QYAAVYQS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[NP]{[HG]|PP}VYQS{I|L};[Y{I|L}]QSAAVYQS{I|L};[Y{I|L}]Y{[HG]|PP}VYTN{I|L} 4.41;3.8963;3.6748;3.6566;3.6478;3.6385;3.5875;3.3928;3.2532;3.143 -;-;-;-;-;-;-;-;-;- 7513 1 1.183 133404.8 1.0 8595 5533 14110 HBL1_DMSO_200M_050219_1,14130 HBL1_DMSO_200M_050219_1,14130,WYQRVYQSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14132 70.268 1.8 39566000.0 25 0 8670900.0 + 25210 MVADKFTEL 9 77 527.2677912746994 1052.5210296161988 2 527.2685424685478 MULTI CID FTMS 0 0 0 14131 34787788.0 1.0 0 0.0 1 Unmodified _MVADKFTEL_ ENSG00000105568|ENST00000322088|PPP2R1A 39.94969957227396 0.0757326808254658 3 MV[YV]V{M(Oxidation (M))|F}AD 8 6 70.232 0.0 0.0 6.6727 0.0 0.0 0.0 125.07248865299064 125.07248865299064 32.40515537059208 0.0 0.0 0.0 0 0.5796896906561032 2.0 1.8684151806525389 0.0 MV[YV]V{M(Oxidation (M))|F}AD 6.6727 - 838 + 1 1.183 60167.2 1.0 8596 5534 14131 HBL1_DMSO_200M_050219_1,14132 HBL1_DMSO_200M_050219_1,14132,MVADKFTEL True True MVADKFTEL 70.268038 527.268542468548 909681120.0 14131.0 ENSG00000105568|ENST00000322088|PPP2R1A 5.700629711151123 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14133 70.269 14.0 4821600.0 25 0 371140.0 28851 QAIEKLEEI 9 120 536.7977112850735 1071.580869636947 2 536.7980834841728 MULTI CID FTMS 0 0 0 14131 1771419.375 0.1143500865717645 3 -0.2743682861328125 2 Unmodified _QAIEKLEEI_ ENSG00000230453|ENST00000684830|ANKRD18B;ENST00000354752.5_1_9:99922575-99942308:-|nuORF;nc|ENSG00000230453|A2A2Z9|ANKRD18B 29.84058131909904 0.1515068451768857 3 {[QN]|[E{I|L}]|[KN]}QK{I|L}AE{[QN]|[E{I|L}]|[KN]} 9 4 + 37.857 0.0 0.0 3.5328 3.5328 67.979 0.0 0.0 0.0 8.907330037915322 8.371501757189002 8.371501757189002 0.0122623118827647 0 0.0 0.8538719643217619 0.1747425010840047 0.0 {[QN]|[E{I|L}]|[KN]}QK{I|L}AE{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}QK{I|L}A{M(Oxidation (M))|F}[HS];{[QN]|[E{I|L}]|[KN]}KQ{I|L}AE{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}KQ{I|L}A{M(Oxidation (M))|F}[HS];{[QN]|[E{I|L}]|[KN]}KEE{I|L}V{[NV]|[RG]};{[QN]|[E{I|L}]|[KN]}QK{I|L}A{[SA]|[TG]}{[NV]|[RG]};{[QN]|[E{I|L}]|[KN]}KQ{I|L}A{[SA]|[TG]}{[NV]|[RG]};{[QN]|[E{I|L}]|[KN]}QK{I|L}[QT]{[NV]|[RG]};{[QN]|[E{I|L}]|[KN]}QKA{I|L}E{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}QKA{I|L}{M(Oxidation (M))|F}[HS] 3.5328;3.5317;3.4137;3.4125;3.371;3.1187;2.9996;2.9544;2.8805;2.8794 -;-;-;-;-;-;-;-;-;- 1571 1 1.183 57221.3 1.0 8597 5534 14131 HBL1_DMSO_200M_050219_1,14133 HBL1_DMSO_200M_050219_1,14133,QAIEKLEEI False True AQIKELEEL 70.269217 536.798083484173 80580192.0 14131.0 ENSG00000137497|ENST00000393695|NUMA1;;nc|ENSG00000137497|Q14980-2|NUMA1;;nc|ENSG00000137497|Q14980-3|NUMA1;;nc|ENSG00000137497|Q14980-4|NUMA1 3.218149185180664 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14134 70.27 19.0 4605400.0 25 0 738430.0 + 25625 NFPEKISSL 9 96 517.7790773719883 1033.5436018107764 2 517.7798950076103 MULTI CID FTMS 0 0 0 14131 2507908.75 0.5991147566282468 3 -0.2743682861328125 3 Unmodified _NFPEKISSL_ ENST00000420672.1_1_2:179278757-179278808:+|nuORF 29.081581746732265 0.1611639662936252 3 [EP]K{I|L}SS{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 9 4 + 51.15 0.0 0.0 4.949 4.949 87.354 0.0 0.0 0.0 18.38476776939273 24.46780933001144 18.38476776939273 23.02887198244136 0 0.0 1.0 1.1307196863200843 0.0 [EP]K{I|L}SS{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[EP]K{I|L}[WH][QP];[TP][VG]{I|L}SS{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PE[RK]M{I|L};[EP]K{I|L}{[WT]|[RM]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[EP]K{[WT]|[RM]}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[TP][K{I|L}]DS{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[ES]|[DT]|[{I|L}C]}{[VA]|[{I|L}G]}VR{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[TP]{[TV]|[{I|L}S]}[VG]S{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[TP][VG]{I|L}[WH][QP] 4.949;2.7209;2.7055;2.6784;2.4075;2.02;1.08;0.92631;0.48035;0.47215 -;-;-;-;-;-;-;-;-;- 216 1 1.183 71335.9 1.0 8598 5534 14131 HBL1_DMSO_200M_050219_1,14134 HBL1_DMSO_200M_050219_1,14134,NFPEKISSL False True NFPEKISSL 70.270396 517.77989500761 279657936.0 14131.0 ENST00000420672.1_1_2:179278757-179278808:+|nuORF 6.379559516906738 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14135 70.272 20.0 1527600.0 25 0 118020.0 + 36193 SVVSPSSFENV 11 61 576.281901475813 1150.549250018426 2 576.2828857302666 MULTI CID FTMS 0 0 0 14131 1744585.875 0.3605736559190899 3 -0.2743682861328125 4 Unmodified _SVVSPSSFENV_ ENSG00000070831|ENST00000656825|CDC42;nc|ENSG00000289694|P60953-1|CDC42 16.149105407346934 0.6992268271266642 3 [VS]V[DV]Y{I|L}E{NN|[MP]|[D{I|L}]|[EV]} 10 6 + 49.666 0.0 0.0 4.3167 4.3167 85.392 0.0 0.0 0.0 20.0 7.269987279362624 7.269987279362624 23.97940008672037 0 0.0 2.0 0.0 0.0 [VS]V[DV]Y{I|L}E{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]E{I|L}Y[DV][PA]V;[TA]{I|L}[DV]Y{I|L}E{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]E[RP][YQ]NV 4.3167;2.2325;1.7935;0.96517 -;-;-;- 125 1 1.183 30894.0 1.0 8599 5534 14131 HBL1_DMSO_200M_050219_1,14135 HBL1_DMSO_200M_050219_1,14135,SVVSPSSFENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14136 70.273 35.0 1456100.0 25 0 123460.0 + 43031 VYAFSARPL 9 79 512.2849883953116 1022.5554238574232 2 512.2852050662041 MULTI CID FTMS 0 0 0 14131 778831.875 0.4748570567582013 -2 0.21197509765625 5 Unmodified _VYAFSARPL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 21.59015148037692 0.2564810811560323 3 [YV]A{M(Oxidation (M))|F}SAR[{I|L}P] 9 0 + 55.908 0.0 0.0 5.4674 5.4674 88.762 0.0 0.0 0.0 44.1247830319829 2.922152515121219 2.922152515121219 19.20818753952375 0 0.8494850021680094 2.0 0.0 0.0 + + [YV]A{M(Oxidation (M))|F}SAR[{I|L}P];[YV]A{M(Oxidation (M))|F}[WK][{I|L}P];[YV]{I|L}[WK]V{[ES]|[DT]|[{I|L}C]};[YV]A[WK]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[TV]|[{I|L}S]}[RV]S{M(Oxidation (M))|F}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.4674;3.589;3.4337;3.3127;2.0377 +;-;-;-;- + 123 + 1 1.183 45294.3 1.0 8600 5534 14131 HBL1_DMSO_200M_050219_1,14136 HBL1_DMSO_200M_050219_1,14136,VYAFSARPL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14137 70.275 116.0 1300500.0 25 0 274380.0 12150 GQLSDLVVV 9 143 465.268327764912 0 465.2680541872978 PEAK CID FTMS 0 0 0 14131 803211.5 1.0 0 0.0 6 Unmodified _GQLSDLVVV_ ENST00000506085.5_1_17:48545715-48551043:+|nuORF;ENST00000511288.1_1_17:48545715-48548505:+|nuORF 52.268347100219714 0.0254642048063414 3 V[QA]VDE 6 7 31.973 0.0 0.0 3.4434 0.0 0.0 216.1426146082344 68.05137048892811 284.1939850971625 0.0 0.0 0.0 0.0 0 0.5 0.0 1.610924374808178 0.3494850021680094 V[QA]VDE 3.4434 - 539 + 1 1.183 122551.4 1.0 8601 5534 14131 HBL1_DMSO_200M_050219_1,14137 HBL1_DMSO_200M_050219_1,14137,GQLSDLVVV True True GQISEVVVV 70.275165 465.268054187298 2648661.75 14131.0 nc|ENSG00000099622|Q14011|CIRBP;;nc|ENSG00000099622|Q14011-2|CIRBP;;ENSG00000099622|ENST00000587896|CIRBP 0.344621588786443 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14138 70.285 552.0 292700.0 25 0 71658.0 -1 0 93 1114.7785139804944 3341.313712541684 3 1115.113696277142 MULTI CID FTMS 0 0 0 14131 433738.375 0.4299635636384814 3 -0.2743682861328125 7 3 {M(Oxidation (M))|F}G 2 -1 7.9588 0.0 0.0 0.23819 0.0 0.0 1652.5630544379708 1481.6455782526002 3134.208632690571 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.23819 - 108 + 1 1.183 143759.2 1.0 8602 5534 14131 HBL1_DMSO_200M_050219_1,14138 HBL1_DMSO_200M_050219_1,14138, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14139 70.29 283.0 375690.0 25 0 23948.0 + 17133 KLHEYFPEM 9 128 398.5273300067731 1192.5601606205194 3 398.5269042849541 MULTI CID FTMS 0 0 0 14131 393555.0 0.386214320955185 3 -0.2743682861328125 8 Unmodified _KLHEYFPEM_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 16.149105407346934 0.3995459350917656 3 {[YC]|[HE]}[K{I|L}]Y{M(Oxidation (M))|F}PEM 9 4 + 32.055 0.0 0.0 2.6879 2.6879 71.629 0.0 0.0 0.0 4.356413615050062 4.356413615050062 4.356413615050062 3.010299956639816 0 0.3935078169319297 0.0 0.3252574989159953 0.3494850021680094 {[YC]|[HE]}[K{I|L}]Y{M(Oxidation (M))|F}PEM;{[YC]|[HE]}[K{I|L}]{M(Oxidation (M))|F}YPEM;{[YD]|[{M(Oxidation (M))|F}M]}PY[KQ]HRS;{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}YR[W{I|L}]M;{[YC]|[HE]}Y[K{I|L}]{M(Oxidation (M))|F}PEM;{[YC]|[HE]}[K{I|L}]YP{M(Oxidation (M))|F}EM;{[YC]|[HE]}[K{I|L}]PY{M(Oxidation (M))|F}EM;[TP]{[QC]|[C(Carbamidomethyl (C))A]}[K{I|L}]{M(Oxidation (M))|F}PEM;{[YC]|[HE]}Y{M(Oxidation (M))|F}[K{I|L}]PEM;[DP]WKKYPEM 2.6879;2.4355;2.3226;2.3164;2.0354;1.8697;1.8697;1.8147;1.783;1.7446 -;-;-;-;-;-;-;-;-;- 189 1 1.183 89243.4 1.0 8603 5534 14131 HBL1_DMSO_200M_050219_1,14139 HBL1_DMSO_200M_050219_1,14139,KLHEYFPEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14140 70.301 649.0 289890.0 25 0 66309.0 -1 0 68 1133.789593661514 3398.346951584742 3 1134.458056628704 MULTI CID FTMS 0 0 0 14131 313358.28125 0.9618903054644288 -1 0.0407791137695312 9 3 {M(Oxidation (M))|F}GYCC 5 -1 20.433 0.0 0.0 0.60126 0.0 0.0 1709.5903120357168 1112.5575655572875 2822.1478775930045 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}GYCC 0.60126 - 61 + 1 1.183 153826.3 1.0 8604 5534 14131 HBL1_DMSO_200M_050219_1,14140 HBL1_DMSO_200M_050219_1,14140, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14141 70.306 256.0 532000.0 25 0 65114.0 + 41508 VPNLKPLTV 9 160 490.8108370383298 979.6071211434596 2 490.8106872439384 MULTI CID FTMS 0 0 0 14131 302292.90625 1.0 0 0.0 10 Unmodified _VPNLKPLTV_ ENSG00000142166|ENST00000270139|IFNAR1;nc|ENSG00000142166|P17181-2|IFNAR1;nc|ENSG00000142166|P17181-3|IFNAR1;nc|ENSG00000142166|P17181-4|IFNAR1 49.55428908609986 0.0413471690215031 3 VPN{I|L}KP{I|L}TV 9 0 + 63.168 0.0 0.0 6.4483 6.4483 84.103 0.0 0.0 0.0 28.69666231504993 4.393326938302636 4.393326938302636 4.393326938302636 0 0.8129529932484498 1.2218487496163564 0.4049471895720985 0.0 + + VPN{I|L}KP{I|L}TV;VPN{I|L}KP{I|L}S{I|L};VPGG{I|L}KP{I|L}TV;VPGG{I|L}KP{I|L}S{I|L} 6.4483;5.9999;5.5084;5.0599 +;-;-;- + 1370 + 1 1.183 105929.4 1.0 8605 5534 14131 HBL1_DMSO_200M_050219_1,14141 HBL1_DMSO_200M_050219_1,14141,VPNLKPLTV True True VPNLKPLTV 70.306173 490.810687243938 4351470.5 14131.0 nc|ENSG00000142166|P17181-2|IFNAR1;;nc|ENSG00000142166|P17181-4|IFNAR1;;ENSG00000142166|ENST00000270139|IFNAR1;;nc|ENSG00000142166|P17181-3|IFNAR1 7.162410418192546 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14142 70.316 574.0 325770.0 25 0 10675.0 -1 0 167 680.3659193473263 679.3586428807263 1 681.3712646365166 MULTI CID FTMS 0 0 0 14131 284410.28125 0.1003359868431961 6 -0.524017333984375 11 3 [DV]VA 4 -1 27.189 0.0 0.0 4.0021 0.0 0.0 0.0 292.13336724313166 292.13336724313166 2.234296302443489 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.3494850021680094 0.0 [DV]VA 4.0021 - 555 1 1.183 137062.6 1.0 8606 5534 14131 HBL1_DMSO_200M_050219_1,14142 HBL1_DMSO_200M_050219_1,14142, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14143 70.329 737.0 420990.0 25 0 27974.0 + 6058 DSGALLSCF 9 239 456.7085636075559 0 456.7087890505791 PEAK CID FTMS 0 0 0 14131 261635.03125 0.5732570371073842 2 -0.1948776245117187 12 Unmodified _DSGALLSCF_ REV__ENST00000407327.8_1_19:10754607-10754775:+|nuORF 16.942295170755138 0.2326366549411506 3 {I|L}{I|L}WAA 5 -1 12.652 0.0 0.0 1.3881 0.0 0.0 130.9872433266367 223.07290064029533 354.06014396693206 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}WAA 1.3881 - 155 + 1 1.183 232418.3 1.0 8607 5534 14131 HBL1_DMSO_200M_050219_1,14143 HBL1_DMSO_200M_050219_1,14143,DSGALLSCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14144 70.342 700.0 355410.0 25 0 51415.0 -1 0 122 1074.0827817526008 3219.2265158580026 3 1074.752368152142 MULTI CID FTMS 0 0 0 14131 226943.59375 0.2106484363297824 -1 0.0407791137695312 13 3 YEEEA{I|L} 6 -1 18.505 0.0 0.0 0.57483 0.0 0.0 1813.6402864652275 668.2425020807249 2481.8827885459523 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 YEEEA{I|L} 0.57483 - 1390 + 1 1.183 190857.9 1.0 8608 5534 14131 HBL1_DMSO_200M_050219_1,14144 HBL1_DMSO_200M_050219_1,14144, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14145 70.351 504.0 139930.0 25 0 11528.0 -1 RHNHTCLTICL 11 122 684.3367868751383 1366.6590208170765 2 684.3361083865166 MULTI CID FTMS 0 0 0 14131 217009.4375 1.0 0 0.0 14 Carbamidomethyl (C) _RHNHTCLTIC(Carbamidomethyl (C))L_ ENSG00000225968|ENST00000424383|ELFN1 9.38312468134398 0.8308777417566128 3 {[QV]|[N{I|L}]|[RA]|[KV]}S{[ET]|[MV]}{M(Oxidation (M))|F}{I|L} 7 -1 19.965 0.0 0.0 1.4609 0.0 0.0 0.0 559.2347403817827 559.2347403817827 4.604093769761873 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.3494850021680094 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}S{[ET]|[MV]}{M(Oxidation (M))|F}{I|L} 1.4609 - 817 1 1.183 55633.9 1.0 8609 5534 14131 HBL1_DMSO_200M_050219_1,14145 HBL1_DMSO_200M_050219_1,14145,RHNHTCLTICL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14146 70.355 197.0 499170.0 25 0 41535.0 27452 PIVPALTT 8 133 406.24857980309577 810.4826066729916 2 406.2481567263603 MULTI CID FTMS 0 0 0 14131 197395.609375 0.012561632876459 18 -1.3480911254882812 15 Unmodified _PIVPALTT_ ENST00000370242.8_1_10:102739012-102743752:-|nuORF;nc|ENSG00000055950|Q8N983|MRPL43 6.354104778181461 0.7857632046190106 3 M{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3 7 12.447 0.0 0.0 1.5358 0.0 0.0 404.32179231927904 0.0 404.32179231927904 0.0 1.1882150839979406 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 M{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 1.5358 - 74 + 1 1.183 83143.7 1.0 8610 5534 14131 HBL1_DMSO_200M_050219_1,14146 HBL1_DMSO_200M_050219_1,14146,PIVPALTT False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 14147 70.365 550.0 214990.0 25 0 10856.0 -1 RCHRRRRRCCC 11 127 866.9067123982009 1731.7988718632016 2 867.4000732302666 MULTI CID FTMS 0 0 0 14131 172655.140625 0.0095944148234157 57 -4.546188354492188 16 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 3 [NP]{I|L}TT[HA]QDAD{I|L}NP[EP] 16 -1 + 88.543 0.0 0.0 5.1128 5.1128 83.715 0.0 0.0 0.0 9.352746703633445 7.659167939666304 7.659167939666304 9.01390202114048 0 0.0 0.8860566476931632 1.416386562212267 0.6747425010840047 [NP]{I|L}TT[HA]QDAD{I|L}NP[EP];[NP]{I|L}TT[HA]QDAD{I|L}GGP[EP];[NP]{I|L}TT[HA][AG]DAD{I|L}NP[EP];[{I|L}P]NTT[HA]QDAD{I|L}NP[EP];[{I|L}P]SGTA[HA]QDAD{I|L}NP[EP];[NP]{I|L}TT[HA]QWNNNP[EP];[{I|L}P]SQT[HA]QDAD{I|L}NP[EP];[NP]{I|L}NR[HM]DAD{I|L}NP[EP];[NP]{I|L}TT[HA]QDW{I|L}N[WH];[NP]{I|L}TT[HA]QWD{I|L}N[WH] 5.1128;4.5923;4.5923;4.5727;4.4149;4.3497;4.2998;4.2274;4.1372;4.1372 -;-;-;-;-;-;-;-;-;- 9517 1 1.183 84666.2 1.0 8611 5534 14131 HBL1_DMSO_200M_050219_1,14147 HBL1_DMSO_200M_050219_1,14147,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14148 70.375 527.0 285930.0 25 0 13202.0 + 34225 SLPNEEIVQKI 11 173 635.3548851970488 1268.6952174608975 2 635.3530761599541 MULTI CID FTMS 0 0 0 14131 168991.3125 1.0 0 0.0 17 Unmodified _SLPNEEIVQKI_ ENSG00000159140|ENST00000356577|SON;ENST00000475072.1_1_21:34915398-34918735:+|nuORF;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON 46.0223103267499 0.1396584557920269 3 {[TV]|[{I|L}S]}PNEE{I|L}VQK{I|L} 11 0 + 65.1 0.0 0.0 5.1312 5.1312 82.274 0.0 0.0 0.0 27.36758565225417 6.828831844425629 6.828831844425629 6.828831844425629 0 0.5994850021680094 2.0 0.0 0.8609243748081783 + + {[TV]|[{I|L}S]}PNEE{I|L}VQK{I|L};{[TV]|[{I|L}S]}PNEE{I|L}VQ{I|L}K;{[TV]|[{I|L}S]}PGGEE{I|L}VQK{I|L};{[TV]|[{I|L}S]}PNEE{I|L}V[AG]K{I|L};{[TV]|[{I|L}S]}PNEE{I|L}V[KA]AV;{[TV]|[{I|L}S]}PNEE{I|L}V[KA]G{I|L};{[TV]|[{I|L}S]}PNEE{I|L}V[AG]{I|L}K;{[TV]|[{I|L}S]}PGGEE{I|L}VQ{I|L}K;{[TV]|[{I|L}S]}PN[Q{I|L}][DN]QK{I|L};{[TV]|[{I|L}S]}PN[K{I|L}][DN]QK{I|L} 5.1312;4.593;4.4117;4.4117;4.0302;3.9212;3.8735;3.8735;3.7191;3.7191 +;-;-;-;-;-;-;-;-;- + 2391 + 1 1.183 114401.1 1.0 8612 5534 14131 HBL1_DMSO_200M_050219_1,14148 HBL1_DMSO_200M_050219_1,14148,SLPNEEIVQKI False True SLPNEEIVQKI 70.375189 635.353076159954 2005571.25 14131.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-8|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;ENST00000475072.1_1_21:34915398-34918735:+|nuORF;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-9|SON 6.215139706929524 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14149 70.383 421.0 163650.0 25 0 8841.6 + -1 CRWWRPCERRW 11 91 874.4104063995759 1746.8062598659517 2 874.4175903201103 MULTI CID FTMS 0 0 0 14131 162740.234375 1.0 0 0.0 18 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))RWWRPC(Carbamidomethyl (C))ERRW_ REV__ENST00000599470.5_2_19:39616427-39616532:+|nuORF 0.0 0.8751479354844584 3 [MN]PAR[R{M(Oxidation (M))|F}]YVAEM 12 -1 68.554 0.0 0.0 3.9246 0.0 0.0 0.0 278.1147554986938 278.1147554986938 46.15865011156764 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.3252574989159953 0.4247425010840047 [MN]PAR[R{M(Oxidation (M))|F}]YVAEM 3.9246 - 788 + 1 1.183 53842.0 1.0 8613 5534 14131 HBL1_DMSO_200M_050219_1,14149 HBL1_DMSO_200M_050219_1,14149,CRWWRPCERRW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14150 70.39 388.0 191870.0 25 0 16231.0 19025 LDLIEPLLQL 10 130 583.853891409498 1165.693229885796 2 584.3563110232353 MULTI CID FTMS 0 0 0 14131 159510.390625 0.1965730620329383 -12 1.0379562377929688 19 Unmodified _LDLIEPLLQL_ ENSG00000113119|ENST00000394671|TMCO6;ENST00000510336.5_1_5:140021201-140024680:+|nuORF;ENST00000515265.2_1_5:140022188-140024328:+|nuORF;nc|ENSG00000113119|Q96DC7-2|TMCO6 6.723162845929126 0.6955379296933136 3 {I|L} 1 9 10.969 0.0 0.0 0.94099 0.0 0.0 1034.5981961717318 0.0 1034.5981961717318 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.94099 + + 91 + 1 1.183 60324.5 1.0 8614 5534 14131 HBL1_DMSO_200M_050219_1,14150 HBL1_DMSO_200M_050219_1,14150,LDLIEPLLQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14151 70.397 399.0 242130.0 25 0 21736.0 + 43854 YFISYGIEH 9 137 564.7734252810478 0 564.7734252810478 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _YFISYGIEH_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1;nc|ENSG00000134954|P14921|ETS1 20.41453444215458 0.197313647343139 3 YQS 3 7 21.44 0.0 0.0 1.9015 0.0 0.0 161.03957409549554 585.3187349908811 746.3583090863767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3494850021680094 YQS 1.9015 - 161 + 1 1.183 78612.8 1.0 8615 5534 14131 HBL1_DMSO_200M_050219_1,14151 HBL1_DMSO_200M_050219_1,14151,YFISYGIEH False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14153 70.401 4.7 23350000.0 25 0 2132900.0 + 21773 LPNAVITRI 9 89 498.8137031573884 995.6128533815768 2 498.8138610720634 MULTI CID FTMS 0 0 0 14152 10002519.0 0.1023936031907311 -6 0.5735626220703125 1 Unmodified _LPNAVITRI_ ENSG00000148229|ENST00000374171|POLE3;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 67.83816525789305 0.0219346420158844 3 {I|L}PNAV{I|L}T[R{I|L}] 9 0 + 92.758 0.0 0.0 9.3166 9.3166 92.969 0.0 0.0 0.0 58.97099695308839 6.439389643433628 6.439389643433628 7.825834421237516 0 1.336696871556164 1.6989700043360187 0.0 1.079689690656103 + + {I|L}PNAV{I|L}T[R{I|L}];{I|L}PN{I|L}G{I|L}T[R{I|L}];{I|L}PNA{I|L}VT[R{I|L}];{I|L}PANV{I|L}T[R{I|L}];{I|L}PGGAV{I|L}T[R{I|L}];{I|L}P{I|L}NG{I|L}T[R{I|L}];{I|L}PN{I|L}AVT[R{I|L}];{I|L}PAN{I|L}VT[R{I|L}];{I|L}PGG{I|L}G{I|L}T[R{I|L}];{I|L}PGGA{I|L}VT[R{I|L}] 9.3166;8.5306;8.5107;8.5107;8.3917;7.9015;7.7247;7.7048;7.6057;7.5858 +;-;-;-;-;-;-;-;-;- + 497 + 1 1.189 86101.5 1.0 8616 5535 14152 HBL1_DMSO_200M_050219_1,14153 HBL1_DMSO_200M_050219_1,14153,LPNAVITRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14154 70.402 16.0 3433600.0 25 0 405400.0 + 3701 DAFLEAAKKI 10 87 553.3157837013837 1104.6170144695673 2 553.3160888552666 MULTI CID FTMS 0 0 0 14152 1692192.375 0.3437652202168257 1 -0.0617446899414062 2 Unmodified _DAFLEAAKKI_ ENSG00000119396|ENST00000373840|RAB14 45.739877483867886 0.1051543674217965 3 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}EAAKK{I|L} 10 0 + 72.428 0.0 0.0 6.5569 6.5569 92.747 0.0 0.0 0.0 60.64564955817456 9.586073148417752 9.586073148417752 23.979400086720386 0 1.25 1.3979400086720375 0.4247425010840047 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}EAAKK{I|L};W{M(Oxidation (M))|F}{I|L}[RD]KK{I|L} 6.5569;4.386 +;- + 183 + 1 1.189 47143.3 1.0 8617 5535 14152 HBL1_DMSO_200M_050219_1,14154 HBL1_DMSO_200M_050219_1,14154,DAFLEAAKKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14155 70.404 25.0 1304400.0 25 0 125100.0 + 22672 LPYTQSVQI 9 66 524.7877200028285 1047.5608870724568 2 524.7883788943291 MULTI CID FTMS 0 0 0 14152 1542504.5 0.9487402665029774 -1 0.1331329345703125 3 Unmodified _LPYTQSVQI_ ENSG00000121057|ENST00000337714|AKAP1 27.22323531849824 0.1848086127304535 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TQ{I|L}SV[Q{I|L}] 9 2 + 38.082 0.0 0.0 3.6353 3.6353 73.205 0.0 0.0 0.0 4.137342758552698 20.02243120405233 4.137342758552698 3.0102999566398125 0 0.0 0.0 1.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TQ{I|L}SV[Q{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}QSV[Q{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T[AG]{I|L}SV[Q{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}[AG]SV[Q{I|L}];[{I|L}P][YT]QSV[Q{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WR]SV[Q{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WK]{[QS]|[NT]}Q{I|L};[{I|L}P][YT][AG]SV[Q{I|L}] 3.6353;3.348;2.7563;2.4689;1.558;1.5143;1.1063;0.67901 -;-;-;-;+;-;-;- + 141 1 1.189 34491.9 1.0 8618 5535 14152 HBL1_DMSO_200M_050219_1,14155 HBL1_DMSO_200M_050219_1,14155,LPYTQSVQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14156 70.405 31.0 2767600.0 25 0 155690.0 + 29574 QLREAFEQL 9 110 567.3012500817689 1132.5879472303377 2 567.3016845583916 MULTI CID FTMS 0 0 0 14152 1270743.0 0.7707978377811151 1 -0.0617446899414062 4 Unmodified _QLREAFEQL_ ENSG00000122952|ENST00000373944|ZWINT;nc|ENSG00000122952|O95229-2|ZWINT 96.11092074494114 0.0124975504059861 3 [Q{I|L}]REA{M(Oxidation (M))|F}EQ{I|L} 9 0 + 75.51 0.0 0.0 6.667 6.667 83.422 0.0 0.0 0.0 3.288493772929044 14.973024840566469 3.288493772929044 3.288493772929044 0 0.6237125054200234 0.9208187539523752 1.274227503252014 1.7971062485323517 + + [Q{I|L}]REA{M(Oxidation (M))|F}EQ{I|L};[AG]{I|L}REA{M(Oxidation (M))|F}EQ{I|L};[Q{I|L}]REA{M(Oxidation (M))|F}E[AG]{I|L};[AG]E[R{I|L}]A{M(Oxidation (M))|F}EQ{I|L};[AG]{I|L}REA{M(Oxidation (M))|F}E[AG]{I|L};[Q{I|L}]REAE{M(Oxidation (M))|F}Q{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[R{I|L}]A{M(Oxidation (M))|F}EQ{I|L};[AG]{I|L}REAE{M(Oxidation (M))|F}Q{I|L};[AG]E[R{I|L}]A{M(Oxidation (M))|F}E[AG]{I|L};[Q{I|L}]REAE{M(Oxidation (M))|F}[AG]{I|L} 6.667;6.3766;5.854;5.6715;5.5675;5.4518;5.2052;5.1615;4.8624;4.6388 +;-;-;-;-;-;-;-;-;- + 417 1 1.189 67348.5 1.0 8619 5535 14152 HBL1_DMSO_200M_050219_1,14156 HBL1_DMSO_200M_050219_1,14156,QLREAFEQL True True QLREAFEQL 70.404701 567.301684558392 50981172.0 14152.0 chr10:56358947-56359687|23|15.57|0.17|6.55|-|0|ZWINT,ZWINT|1;;nc|ENSG00000122952|O95229-2|ZWINT;;ENSG00000122952|ENST00000373944|ZWINT 6.357539335886638 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14157 70.406 36.0 1510700.0 25 0 205080.0 + 20967 LNLEEEYVS 9 98 548.261850486333 1094.5091480394658 2 548.2626830935478 MULTI CID FTMS 0 0 0 14152 1206028.75 0.5936085364385308 1 -0.0617446899414062 5 Unmodified _LNLEEEYVS_ ENST00000484412.1_1_2:242169018-242170248:-|nuORF;ENST00000487169.5_1_2:242169444-242174670:-|nuORF 15.847184025352805 0.4077185912009129 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[Y{I|L}]PW 7 5 38.473 0.0 0.0 3.515 0.0 0.0 0.0 191.9907513932345 191.9907513932345 7.014224667125717 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[Y{I|L}]PW 3.515 - 171 1 1.189 48095.5 1.0 8620 5535 14152 HBL1_DMSO_200M_050219_1,14157 HBL1_DMSO_200M_050219_1,14157,LNLEEEYVS False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14158 70.407 19.0 4042600.0 25 0 351290.0 + 7913 ELQKLLTNL 9 110 536.3259515814632 1070.6373502297265 2 536.3242675662041 MULTI CID FTMS 0 0 0 14152 1033666.875 0.5929911840863649 1 -0.0617446899414062 6 Unmodified _ELQKLLTNL_ REV__ENSG00000242715|ENST00000239859|CCDC169;REV__nc|ENSG00000120669|Q9NX45-3|SOHLH2;REV__nc|ENSG00000242715|A6NNP5-3|CCDC169;REV__nc|ENSG00000242715|A6NNP5-4|CCDC169;REV__nc|ENSG00000242715|A6NNP5-5|CCDC169;REV__nc|ENSG00000242715|A6NNP5-6|CCDC169 44.391923383255 0.0526658857881241 3 [AG]{I|L}EK{I|L}{I|L}T 8 -1 46.001 0.0 0.0 4.2966 0.0 0.0 0.0 242.1224936225576 242.1224936225576 13.736290066587308 0.0 0.0 0.0 0 1.2302046884880935 1.3010299956639813 0.5994850021680094 0.3494850021680094 [AG]{I|L}EK{I|L}{I|L}T 4.2966 - 3361 1 1.189 68158.2 1.0 8621 5535 14152 HBL1_DMSO_200M_050219_1,14158 HBL1_DMSO_200M_050219_1,14158,ELQKLLTNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14159 70.408 33.0 2934600.0 25 0 262040.0 + 4915 DGLAPPQHLI 10 143 530.7917658106638 1059.5689786881276 2 530.7915527224541 MULTI CID FTMS 0 0 0 14152 1047765.75 0.3369404418685177 4 -0.3372573852539062 7 Unmodified _DGLAPPQHLI_ ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;nc|ENSG00000141510|P04637-7|TP53;nc|ENSG00000141510|P04637-8|TP53;nc|ENSG00000141510|P04637-9|TP53 21.53697664764585 0.484802182336468 3 {[QV]|[N{I|L}]|[RA]|[KV]}EPPQH{I|L}{I|L} 9 3 + 32.635 0.0 0.0 3.08 3.08 71.626 0.0 0.0 0.0 3.2390874094431865 2.9588001734407534 2.9588001734407534 2.9588001734407534 0 0.2614393726401688 1.3010299956639813 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}EPPQH{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EPP[YT]KV;{[RE]|[WV]}APPQH{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EP[{M(Oxidation (M))|F}T]{I|L}KV;{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[EC]{I|L}KV;{[RE]|[WV]}APP[YT]KV;{[QV]|[N{I|L}]|[RA]|[KV]}EPP[YK]S{I|L};{[RE]|[WV]}AP[{M(Oxidation (M))|F}T]{I|L}KV;{[RE]|[WV]}A{I|L}[EC]{I|L}KV;{[QV]|[N{I|L}]|[RA]|[KV]}EPP[AG]H{I|L}{I|L} 3.08;2.8008;2.7743;2.6346;2.593;2.4951;2.356;2.3289;2.2873;2.211 -;-;-;-;-;-;-;-;-;- 1465 + 1 1.189 77662.7 1.0 8622 5535 14152 HBL1_DMSO_200M_050219_1,14159 HBL1_DMSO_200M_050219_1,14159,DGLAPPQHLI False True DGLAPPQHLI 70.408237 530.791552722454 59612752.0 14152.0 nc|ENSG00000141510|P04637-3|TP53;;nc|ENSG00000141510|P04637-8|TP53;;nc|ENSG00000141510|P04637-4|TP53;;ENSG00000141510|ENST00000269305|TP53;;nc|ENSG00000141510|P04637-7|TP53;;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;;nc|ENSG00000141510|P04637-9|TP53;;nc|ENSG00000141510|P04637-2|TP53;;nc|ENSG00000141510|P04637-6|TP53;;nc|ENSG00000141510|P04637-5|TP53 4.776067733764648 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14160 70.409 46.0 1635900.0 25 0 215180.0 + 24086 LYHFSSSEL 9 102 541.7614183199368 1081.5082837066734 2 541.7618286013603 MULTI CID FTMS 0 0 0 14152 991055.1875 0.7381938850261873 -1 0.1331329345703125 8 Unmodified _LYHFSSSEL_ ENSG00000105173|ENST00000262643|CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1 81.86404211737425 0.017065112157077 3 {[{M(Oxidation (M))|F}H]|[RQ]}Y{I|L}SSSE{I|L} 9 4 + 66.833 0.0 0.0 6.1796 6.1796 76.496 0.0 0.0 0.0 0.2118929906993827 16.478174818886373 0.2118929906993827 0.2118929906993827 0 0.0 1.3010299956639813 1.6989700043360187 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}Y{I|L}SSSE{I|L};[Y{I|L}]H{M(Oxidation (M))|F}SSSE{I|L};{[WN]|[YH]}{I|L}{M(Oxidation (M))|F}SSSE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}S[Y{I|L}]SSE{I|L};{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}SSSE{I|L};{[QN]|[E{I|L}]|[KN]}S[KC]SSSE{I|L};[Y{I|L}]H{[ES]|[DT]|[{I|L}C]}SS{M(Oxidation (M))|F}{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}[KC]SSSE{I|L};[Y{M(Oxidation (M))|F}]H{I|L}SSSE{I|L};{[ES]|[DT]|[{I|L}C]}[KC]{I|L}SSSE{I|L} 6.1796;6.16;5.3705;4.8397;4.8138;4.7447;4.5643;4.4051;4.3303;4.2855 -;+;-;-;-;-;-;-;-;- + 666 1 1.189 60656.2 1.0 8623 5535 14152 HBL1_DMSO_200M_050219_1,14160 HBL1_DMSO_200M_050219_1,14160,LYHFSSSEL True True LYHFSSSEL 70.409495 541.76182860136 22483938.0 14152.0 ENSG00000105173|ENST00000262643|CCNE1;;nc|ENSG00000105173|P24864-2|CCNE1;;nc|ENSG00000105173|P24864-3|CCNE1 6.030783971150716 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14161 70.412 93.0 1609500.0 25 0 281120.0 + + 18674 ALLGDLTKA 9 117 451.2707545503204 900.5269561674407 2 451.2710449099541 MULTI CID FTMS 0 0 0 14152 946551.75 0.3756324313191269 -2 0.1739120483398437 9 Unmodified _LAISDALKA_ ENSG00000105576|ENST00000425528|TNPO2;ENSG00000083312|ENST00000337273|TNPO1;nc|ENSG00000083312|Q92973-3|TNPO1;ENST00000423641.1_1_10:86150999-86151317:+|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;nc|ENSG00000083312|Q92973-2|TNPO1 39.957323273325 0.0756908302845263 3 [{I|L}A]{I|L}GD{I|L}TKA 9 -1 + 64.788 0.0 0.0 7.1945 7.1945 94.16 0.0 0.0 0.0 26.11165618061249 7.57734712010307 7.57734712010307 19.772437815030628 0 0.6747425010840047 2.0 0.3252574989159953 0.2215141619232908 [{I|L}A]{I|L}GD{I|L}TKA;[{I|L}A]{I|L}A[DV]TKA;{NN|[MP]|[D{I|L}]|[EV]}GT{I|L}K[RV];{NN|[MP]|[D{I|L}]|[EV]}GTK{I|L}[RV];[{I|L}A]DVKK{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}AS{I|L}K[RV];{NN|[MP]|[D{I|L}]|[EV]}G{I|L}TK[RV];[{I|L}A]{I|L}ACR[RV];{NN|[MP]|[D{I|L}]|[EV]}ASK{I|L}[RV];{NN|[MP]|[D{I|L}]|[EV]}G{I|L}KK{NN|[MP]|[D{I|L}]|[EV]} 7.1945;4.9988;3.5345;2.9113;2.5632;2.4748;2.4432;2.3656;1.8516;1.4963 -;-;-;-;-;-;-;-;-;- 949 + 1 1.189 115218.8 1.0 8624 5535 14152 HBL1_DMSO_200M_050219_1,14161 HBL1_DMSO_200M_050219_1,14161,LAISDALKA False False ALLGDLTKA 70.41152 451.271044909954 30931062.0 14152.0 ENSG00000105576|ENST00000425528|TNPO2;;ENSG00000083312|ENST00000337273|TNPO1;;nc|ENSG00000083312|Q92973-3|TNPO1;;ENST00000423641.1_1_10:86150999-86151317:+|nuORF;;nc|ENSG00000105576|O14787-2|TNPO2;;nc|ENSG00000083312|Q92973-2|TNPO1 5.002936681111653 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14162 70.418 337.0 208690.0 25 0 59626.0 -1 0 54 1083.7328218527068 3248.1766361583204 3 1084.402392566204 MULTI CID FTMS 0 0 0 14152 703608.5625 1.0 0 0.0 10 3 {M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}A{I|L}{M(Oxidation (M))|F} 6 -1 9.3855 0.0 0.0 0.28895 0.0 0.0 1762.5136245389829 802.3311861627561 2564.844810701739 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}A{I|L}{M(Oxidation (M))|F} 0.28895 - 37 + 1 1.189 69376.2 1.0 8625 5535 14152 HBL1_DMSO_200M_050219_1,14162 HBL1_DMSO_200M_050219_1,14162, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14163 70.419 31.0 1232100.0 25 0 73729.0 + 24056 RTIEYLEEV 9 59 576.3026931586445 1150.590833384089 2 576.3016235232353 MULTI CID FTMS 0 0 0 14152 576245.5625 1.0 0 0.0 11 Unmodified _LWYLSLEEV_ ENSG00000084754|ENST00000380649|HADHA 20.453626601364224 0.2830276176381075 3 [VS]V[DV]Y{I|L}EEV 10 6 + 63.205 0.0 0.0 5.4933 5.4933 88.333 0.0 0.0 0.0 15.295000083553203 16.53212513775344 15.295000083553203 15.295000083553203 0 0.6549471895720984 2.0 0.0 0.0 [VS]V[DV]Y{I|L}EEV;EE[K{I|L}]Y{I|L}EEV;HHT{I|L}Y[RP]EV;[VS]V[DV]Y{I|L}TQQ;HHT{I|L}Y[DV][PA]V;HHT[RP][YK]NV;EE[K{I|L}]Y{I|L}TQQ;HHT[RP][Y{I|L}]EV;HHE[KP][YK]NV;HHE[KP][Y{I|L}]EV 5.4933;4.1639;3.4827;3.2944;2.944;2.0459;1.9651;1.8531;1.7842;1.5914 -;-;-;-;-;-;-;-;-;- 151 1 1.189 37394.2 1.0 8626 5535 14152 HBL1_DMSO_200M_050219_1,14163 HBL1_DMSO_200M_050219_1,14163,LWYLSLEEV False False RTIEYLEEV 70.418849 576.301623523235 12971080.0 14152.0 ENSG00000084754|ENST00000380649|HADHA 3.666630903879801 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14164 70.422 149.0 819460.0 25 0 132770.0 + 18831 LASLAAALVL 10 124 471.3050210539092 940.5954891746184 2 471.3050720095634 MULTI CID FTMS 0 0 0 14152 580940.25 0.502386636005823 -2 0.1739120483398437 12 Unmodified _LASLAAALVL_ ENST00000471809.5_1_22:37159849-37172159:-|nuORF;ENST00000476548.1_1_22:37168757-37172063:-|nuORF 34.10243960390752 0.2198439752719791 3 [{I|L}P]KTSVA{I|L}{I|L} 9 6 + 43.299 0.0 0.0 4.6033 4.6033 72.649 0.0 0.0 0.0 0.9691001300805624 2.0395587027095985 0.9691001300805624 0.9691001300805624 0 0.3182503180159344 0.7958800173440752 0.805462187404089 0.0 [{I|L}P]KTSVA{I|L}{I|L};[KP]{I|L}TSVA{I|L}{I|L};[{I|L}P]KTS[{I|L}A]V{I|L};{[TV]|[{I|L}S]}T[KP]VA{I|L}{I|L};[KP]{I|L}TS[{I|L}A]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}V]SVA{I|L}{I|L};[VG]A[{I|L}V]SVA{I|L}{I|L};{[TV]|[{I|L}S]}T[KP][{I|L}A]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}V]S[{I|L}A]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RK]{I|L}A{I|L}{I|L} 4.6033;4.5003;3.4085;3.353;3.3055;3.213;2.8624;2.1581;2.0182;1.8557 -;-;-;-;-;-;-;-;-;- 731 1 1.189 95602.7 1.0 8627 5535 14152 HBL1_DMSO_200M_050219_1,14164 HBL1_DMSO_200M_050219_1,14164,LASLAAALVL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14165 70.428 317.0 282880.0 25 0 20229.0 -1 SPFFFCCFIAV 11 129 697.8177429767029 1393.6209330202057 2 697.8187133669853 MULTI CID FTMS 0 0 0 14152 568036.6875 0.4913975833105168 1 -0.0617446899414062 13 2 Carbamidomethyl (C) _SPFFFC(Carbamidomethyl (C))C(Carbamidomethyl (C))FIAV_ ENSG00000213809|ENST00000240618|KLRK1 13.90604991867851 0.7458848613461305 3 QE{I|L}{I|L}{[VA]|[{I|L}G]} 6 -1 33.483 0.0 0.0 2.4026 0.0 0.0 722.2534046857437 0.0 722.2534046857437 0.0 14.969209759735698 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 QE{I|L}{I|L}{[VA]|[{I|L}G]} 2.4026 - 195 1 1.189 70729.5 1.0 8628 5535 14152 HBL1_DMSO_200M_050219_1,14165 HBL1_DMSO_200M_050219_1,14165,SPFFFCCFIAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14166 70.436 444.0 232480.0 25 0 53981.0 -1 0 51 1163.8364476084344 3488.4875134255035 3 1164.504443347454 MULTI CID FTMS 0 0 0 14152 462366.78125 0.7407160041556128 2 -0.1412353515625 14 3 E 1 -1 6.9897 0.0 0.0 0.20036 0.0 0.0 2832.259042447812 524.1635225885374 3356.4225650363496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20036 - 17 + 1 1.189 88663.6 1.0 8629 5535 14152 HBL1_DMSO_200M_050219_1,14166 HBL1_DMSO_200M_050219_1,14166, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14167 70.438 137.0 877130.0 25 0 67102.0 + 10795 FYQPKIQQF 9 107 599.8165959556619 1197.6186389781235 2 599.8165161013603 MULTI CID FTMS 0 0 0 14152 412443.65625 0.1499484584010693 -4 0.4006423950195312 15 Unmodified _FYQPKIQQF_ ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI 81.61307344734483 0.0171259190214613 3 [Y{M(Oxidation (M))|F}]QP[K{I|L}]QQ{M(Oxidation (M))|F} 9 0 + 44.604 0.0 0.0 3.7244 3.7244 80.478 0.0 0.0 0.0 12.04583197678047 14.09256854528806 12.04583197678047 9.208187539523747 0 1.4916440611282624 0.0 0.0 1.579689690656103 + + [Y{M(Oxidation (M))|F}]QP[K{I|L}]QQ{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}]QP[K{I|L}][AG]Q{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}][AG]P[K{I|L}]QQ{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}]QP[K{I|L}]Q[AG]{M(Oxidation (M))|F};[KP]{I|L}QQ[Y{M(Oxidation (M))|F}]Q{M(Oxidation (M))|F};[EP]{I|L}[RV][Y{M(Oxidation (M))|F}]Q{M(Oxidation (M))|F};[KP]{I|L}QQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F};[AG]{M(Oxidation (M))|F}[RK]{[TV]|[{I|L}S]}Q[YE];[AG]{I|L}[KP]Q[Y{M(Oxidation (M))|F}]Q{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}]Q[KA]{I|L}[PG]Q{M(Oxidation (M))|F} 3.7244;2.9555;2.9555;2.6637;2.079;1.9794;1.6994;1.6641;1.6629;1.6296 +;-;-;-;-;-;-;-;-;- + 1383 + 1 1.189 95034.1 1.0 8630 5535 14152 HBL1_DMSO_200M_050219_1,14167 HBL1_DMSO_200M_050219_1,14167,FYQPKIQQF True True FYQPKIQQF 70.438312 599.81651610136 57005328.0 14152.0 nc|ENSG00000140525|Q9NVI1-2|FANCI;;nc|ENSG00000140525|Q9NVI1-1|FANCI;;ENSG00000140525|ENST00000310775|FANCI 7.812416712443034 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14168 70.446 430.0 379580.0 25 0 53251.0 -1 0 73 1078.7446741695042 3233.2121931087127 3 1079.078417956829 MULTI CID FTMS 0 0 0 14152 412678.84375 0.7703977076366297 -2 0.1739120483398437 16 3 VEYN{I|L} 5 -1 25.037 0.0 0.0 0.77437 0.0 0.0 2172.692942691379 439.2205599420532 2611.913502633432 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7614393726401688 VEYN{I|L} 0.77437 - 243 + 1 1.189 134360.4 1.0 8631 5535 14152 HBL1_DMSO_200M_050219_1,14168 HBL1_DMSO_200M_050219_1,14168, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14169 70.454 442.0 644540.0 25 0 101550.0 + 151 AALPDLTKV 9 179 464.280936093819 926.547319254438 2 464.2800781130791 MULTI CID FTMS 0 0 0 14152 377277.4375 0.4558813556121967 -2 0.1739120483398437 17 Unmodified _AALPDLTKV_ ENSG00000102580|ENST00000602402|DNAJC3 41.95555342248728 0.0647214845423414 3 AA{I|L}PD{I|L}TKV 9 0 + 61.67 0.0 0.0 6.6559 6.6559 84.783 0.0 0.0 0.0 4.416725402828021 4.416725402828021 4.416725402828021 4.416725402828021 0 1.1382104921644451 1.154901959985743 0.3494850021680094 0.1421590589602531 + + AA{I|L}PD{I|L}TKV;[{I|L}P]DTKVRV;[{I|L}P]DTKAA{I|L}V;AA{I|L}PDTK{I|L}V;AA{I|L}V[EP]TKV;[DP]{I|L}TKVRV;[{I|L}P]DTKVGVV;[DP]{I|L}TKAA{I|L}V;AA{I|L}PD{I|L}TVK;{NN|[MP]|[D{I|L}]|[EV]}PTKVRV 6.6559;6.1792;5.9472;5.635;5.6316;5.501;5.3943;5.269;5.1879;4.7869 +;-;-;-;-;-;-;-;-;- + 1726 + 1 1.189 214566.8 1.0 8632 5535 14152 HBL1_DMSO_200M_050219_1,14169 HBL1_DMSO_200M_050219_1,14169,AALPDLTKV True True AALPDLTKV 70.453864 464.280078113079 5463264.5 14152.0 ENSG00000102580|ENST00000602402|DNAJC3 5.86465311050415 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14170 70.456 44.0 1617000.0 25 0 121030.0 + + 8771 EAFDRSFEV 9 112 550.7463947476008 0 550.7470580935478 PEAK CID FTMS 0 0 0 14152 268471.25 0.8888540335450037 1 -0.0617446899414062 18 Unmodified _EVSYFQNDV_ ENSG00000169738|ENST00000306869|DCXR;ENST00000578885.5_1_17:79994327-79995552:-|nuORF;ENST00000580750.5_1_17:79994503-79995558:-|nuORF;ENST00000582074.5_1_17:79994229-79994802:-|nuORF 10.073929032068715 0.3114232490637051 3 {I|L}{M(Oxidation (M))|F} 2 -1 14.464 0.0 0.0 1.3155 0.0 0.0 339.09051448906115 497.2127779596313 836.3032924486924 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.3155 - 190 + 1 1.189 62575.9 1.0 8633 5535 14152 HBL1_DMSO_200M_050219_1,14170 HBL1_DMSO_200M_050219_1,14170,EVSYFQNDV False False EAFDRSFEV 70.45627 550.747058093548 24751036.0 14152.0 ENSG00000169738|ENST00000306869|DCXR;;ENST00000578885.5_1_17:79994327-79995552:-|nuORF;;ENST00000580750.5_1_17:79994503-79995558:-|nuORF;;ENST00000582074.5_1_17:79994229-79994802:-|nuORF 3.9482311407725015 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14171 70.458 49.0 549480.0 25 0 83453.0 + 14892 ILLENFSAEK 10 44 582.3190139560247 1162.6234749788491 2 582.3200561404228 MULTI CID FTMS 0 0 0 14152 358861.71875 0.2937850897372189 -2 0.1739120483398437 19 Unmodified _ILLENFSAEK_ ENST00000560979.1_1_15:49715501-49715549:+|nuORF 16.565877749689598 0.5695826726197942 3 {I|L}{I|L}{I|L}E 4 6 56.186 0.0 0.0 4.8327 0.0 0.0 0.0 691.3045150872294 691.3045150872294 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}{I|L}{I|L}E 4.8327 + + 9 + 1 1.189 25618.4 1.0 8634 5535 14152 HBL1_DMSO_200M_050219_1,14171 HBL1_DMSO_200M_050219_1,14171,ILLENFSAEK False True ILLENFSAEK 70.457585 582.320056140423 19480146.0 14152.0 ENST00000560979.1_1_15:49715501-49715549:+|nuORF 7.917296886444092 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14172 70.459 30.0 961620.0 25 0 122350.0 20526 LLLRHPIAA 9 64 502.3239414596735 1002.633329986147 2 502.3239013552666 MULTI CID FTMS 0 0 0 14152 343223.375 1.0 0 0.0 20 Unmodified _LLLRHPIAA_ ENST00000531936.1_1_11:66050146-66051065:+|nuORF 2.302733041254933 0.8342969208511092 3 {I|L} 1 8 10.485 0.0 0.0 1.0457 0.0 0.0 871.5380216138799 0.0 871.5380216138799 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0457 + + 5 + 1 1.189 27388.2 1.0 8635 5535 14152 HBL1_DMSO_200M_050219_1,14172 HBL1_DMSO_200M_050219_1,14172,LLLRHPIAA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14174 70.463 21.0 1662600.0 25 0 187500.0 -1 PLCRSLQV 8 79 486.7703624698035 971.526172006407 2 486.7688781619072 MULTI CID FTMS 0 0 0 14173 329150.3125 0.6007433998594647 -1 0.0617446899414062 1 Carbamidomethyl (C) _PLC(Carbamidomethyl (C))RSLQV_ ENSG00000163428|ENST00000295628|LRRC58 24.67388899826682 0.525179942228231 3 [{I|L}P][C(Carbamidomethyl (C))R]S{I|L}N{I|L} 8 -1 [{I|L}P][C(Carbamidomethyl (C))R]S{I|L} + + 17.787 0.2332 0.032104 1.8308 1.8308 48.723 0.0 0.0 0.0 0.0 0.914857517151706 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [{I|L}P][C(Carbamidomethyl (C))R]S{I|L}N{I|L} 1.8308 - 44 + 1 1.189 34301.8 1.0 8636 5536 14173 HBL1_DMSO_200M_050219_1,14174 HBL1_DMSO_200M_050219_1,14174,PLCRSLQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14175 70.47 394.0 424260.0 25 0 32657.0 -1 0 118 1031.4510464598343 3091.331309979704 3 1031.785815417767 MULTI CID FTMS 0 0 0 14173 290486.71875 0.1993864681954176 5 -0.4548187255859375 2 3 AEQ[YV]YD 7 -1 34.051 0.0 0.0 1.1015 0.0 0.0 1921.801232930677 298.1043795221313 2219.905612452809 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2931576817365436 0.6549471895720984 AEQ[YV]YD 1.1015 - 24998 + 1 1.189 110886.4 1.0 8637 5536 14173 HBL1_DMSO_200M_050219_1,14175 HBL1_DMSO_200M_050219_1,14175, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14176 70.471 12.0 2142600.0 25 0 269090.0 + 9153 FFYFLFAIST 10 42 628.3215495725626 1254.6285462119251 2 628.3215209841728 MULTI CID FTMS 0 0 0 14173 2185564.0 0.0678846977307637 -5 0.4623870849609375 3 Unmodified _FFYFLFAIST_ REV__ENST00000451311.6_1_X:12994929-12994995:+|nuORF 6.723162845929126 0.6955379296933136 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.55711 0.0 0.0 988.4861959326206 116.05099664859608 1104.5371925812167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.55711 + + 6 + 1 1.189 26558.9 1.0 8638 5536 14173 HBL1_DMSO_200M_050219_1,14176 HBL1_DMSO_200M_050219_1,14176,FFYFLFAIST False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14177 70.472 36.0 1644900.0 25 0 141900.0 + 2216 AQCPIVERL 9 86 514.7815363676435 1027.548519802087 2 514.7819091677666 MULTI CID FTMS 0 0 0 14173 826872.25 0.4188211440357613 -5 0.4623870849609375 4 Unmodified _AQCPIVERL_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF 34.93206674587334 0.1032771302489716 3 [QA]C{I|L}PVER{I|L} 9 2 + 60.398 0.0 0.0 5.8779 5.8779 80.354 0.0 0.0 0.0 39.50759820578515 7.95857860592772 7.95857860592772 3.0102999566398125 0 1.0 0.9208187539523752 0.0 0.0 [QA]C{I|L}PVER{I|L};[QA]CP{I|L}VER{I|L};[QA]{I|L}CPVER{I|L};[{I|L}P]CRKKH{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}RKKH{M(Oxidation (M))|F} 5.8779;5.5849;5.4689;2.0364;0.11919 -;+;-;-;- + 214 + 1 1.189 48128.8 1.0 8639 5536 14173 HBL1_DMSO_200M_050219_1,14177 HBL1_DMSO_200M_050219_1,14177,AQCPIVERL True True AQCPIVERL 70.472368 514.781909167767 70608904.0 14173.0 ENSG00000083845|ENST00000196551|RPS5;;ENST00000598807.1_1_19:58899504-58905010:+|nuORF 6.659558931986491 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14178 70.474 37.0 1027200.0 25 0 84483.0 + 6078 DSQILPKI 8 75 457.2712833509268 912.5280137686536 2 457.2714721560478 MULTI CID FTMS 0 0 0 14173 772332.3125 0.0661246135686174 -5 0.4623870849609375 5 Unmodified _DSQILPKI_ ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF 46.020951573049366 0.1579632664462935 3 {[DS]|[MA]|[CV]|TT}Q{I|L}{I|L}PK{I|L} 8 0 {[DS]|[MA]|[CV]|TT}Q + + 32.589 13.429 4.0678 3.5713 3.5713 51.413 0.0 0.0 0.0 0.0 19.16055784832931 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}Q{I|L}{I|L}PK{I|L} 3.5713 + + 61 + 1 1.189 35471.5 1.0 8640 5536 14173 HBL1_DMSO_200M_050219_1,14178 HBL1_DMSO_200M_050219_1,14178,DSQILPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14179 70.475 40.0 678540.0 25 0 78679.0 + 13127 HFFNLIQK 8 64 349.5309703294099 1045.5710815884297 3 349.5308715701103 MULTI CID FTMS 0 0 0 14173 531110.375 0.625571978315067 -1 0.0617446899414062 6 Unmodified _HFFNLIQK_ REV__ENSG00000205765|ENST00000381647|RIMOC1 3.2813086475875832 0.8044150271109584 3 {[{M(Oxidation (M))|F}H]|[RQ]}N{M(Oxidation (M))|F}A 5 -1 16.198 0.0 0.0 1.5492 0.0 0.0 0.0 426.270336309386 426.270336309386 4.777904301057934 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}N{M(Oxidation (M))|F}A 1.5492 - 41 1 1.189 27586.3 1.0 8641 5536 14173 HBL1_DMSO_200M_050219_1,14179 HBL1_DMSO_200M_050219_1,14179,HFFNLIQK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14180 70.477 117.0 1188100.0 25 0 255050.0 + 12399 GTIGLIHAV 9 118 440.7661547264594 879.5177565197189 2 440.7662536501884 MULTI CID FTMS 0 0 0 14173 479259.75 0.0136584494964274 -5 0.4623870849609375 7 Unmodified _GTIGLIHAV_ ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF 49.66892048692302 0.0410958345688192 3 {[SA]|[TG]}{I|L}G{I|L}{I|L}V[HA] 9 2 + 48.064 0.0 0.0 5.4648 5.4648 80.004 0.0 0.0 0.0 3.4499473991427365 1.5779259536583154 1.5779259536583154 3.6317790241282566 0 0.6861818737241735 1.5228787452803376 0.0 0.0 {[SA]|[TG]}{I|L}G{I|L}{I|L}V[HA];{[SA]|[TG]}{I|L}G{I|L}{I|L}[HA]V;[H{I|L}]AVA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]{I|L}GA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]G{I|L}A{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]AG{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]AV{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]GA{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]{I|L}Q{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]Q{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.4648;5.0519;4.388;4.0458;4.0458;4.0458;3.8456;3.7035;3.6593;3.6593 -;+;-;-;-;-;-;-;-;- + 644 + 1 1.189 111581.6 1.0 8642 5536 14173 HBL1_DMSO_200M_050219_1,14180 HBL1_DMSO_200M_050219_1,14180,GTIGLIHAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14181 70.483 314.0 522740.0 25 0 30396.0 -1 0 116 754.3645771222089 3013.4292026224352 4 754.6153442263603 MULTI CID FTMS 0 0 0 14173 436138.78125 0.869699067832452 -1 0.0617446899414062 8 3 [MN]P{I|L}{I|L} 5 -1 49.08 0.0 0.0 1.6287 0.0 0.0 0.0 2442.1501695105403 2442.1501695105403 28.414609320509925 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.0 0.0 [MN]P{I|L}{I|L} 1.6287 - 741 + 1 1.189 121798.2 1.0 8643 5536 14173 HBL1_DMSO_200M_050219_1,14181 HBL1_DMSO_200M_050219_1,14181, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14182 70.484 24.0 1178600.0 25 0 102790.0 + 15207 IPFAGKVEV 9 61 480.2801826189093 958.5458123046184 2 480.2811462283134 MULTI CID FTMS 0 0 0 14173 354961.40625 0.7118288677613437 -1 0.0617446899414062 9 Unmodified _IPFAGKVEV_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000473243.5_1_19:19764878-19766320:-|nuORF;ENST00000496082.5_1_19:19764878-19766379:-|nuORF;ENST00000497556.5_1_19:19764878-19766187:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 17.11289562659939 0.3734572693229295 3 {I|L}P{M(Oxidation (M))|F}A[WK]{M(Oxidation (M))|F} 7 4 52.523 0.0 0.0 5.4795 0.0 0.0 0.0 66.03568445377186 66.03568445377186 39.75899433273387 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}P{M(Oxidation (M))|F}A[WK]{M(Oxidation (M))|F} 5.4795 - 43 + 1 1.189 30279.3 1.0 8644 5536 14173 HBL1_DMSO_200M_050219_1,14182 HBL1_DMSO_200M_050219_1,14182,IPFAGKVEV False True IPFAGKVEV 70.484076 480.281146228313 4826424.5 14173.0 ENST00000473243.5_1_19:19764878-19766320:-|nuORF;;nc|ENSG00000105726|Q9HD20-2|ATP13A1;;ENSG00000105726|ENST00000357324|ATP13A1;;ENST00000497556.5_1_19:19764878-19766187:-|nuORF;;ENST00000496082.5_1_19:19764878-19766379:-|nuORF 4.578413804372151 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14183 70.491 362.0 272770.0 25 0 36542.0 -1 0 95 805.8131573250299 3219.2235234337195 4 806.0636474490166 MULTI CID FTMS 0 0 0 14173 299652.25 1.0 0 0.0 10 3 T 1 -1 8.2268 0.0 0.0 0.25555 0.0 0.0 1976.7000401555977 1138.4463191193731 3115.1463592749706 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T 0.25555 - 25 + 1 1.189 96482.1 1.0 8645 5536 14173 HBL1_DMSO_200M_050219_1,14183 HBL1_DMSO_200M_050219_1,14183, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14184 70.497 346.0 356740.0 25 0 22971.0 -1 0 159 681.3405026625246 2040.9996785877736 3 681.6760131716728 MULTI CID FTMS 0 0 0 14173 304632.21875 0.6748196208639203 -1 0.0617446899414062 11 3 V{I|L}T{[{M(Oxidation (M))|F}C]|[YS]}PC 7 -1 54.697 0.0 0.0 2.6799 0.0 0.0 0.0 1274.6644744757457 1274.6644744757457 20.208901964327808 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.4247425010840047 0.0 V{I|L}T{[{M(Oxidation (M))|F}C]|[YS]}PC 2.6799 - 5573 + 1 1.189 95878.5 1.0 8646 5536 14173 HBL1_DMSO_200M_050219_1,14184 HBL1_DMSO_200M_050219_1,14184, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14185 70.503 358.0 458980.0 25 0 45813.0 + 43089 VYMTEPIDEY 10 144 630.2783935551307 1258.5422341770611 2 630.2797119021416 MULTI CID FTMS 0 0 0 14173 260204.640625 0.3881557049815659 -3 0.23565673828125 12 Unmodified _VYMTEPIDEY_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 26.88365393820708 0.3646707531412818 3 [{I|L}P]DE 4 6 22.721 0.0 0.0 1.8054 0.0 0.0 0.0 801.3116297426035 801.3116297426035 7.173256566521069 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.25 0.0 + [{I|L}P]DE 1.8054 + + 660 1 1.189 127233.3 1.0 8647 5536 14173 HBL1_DMSO_200M_050219_1,14185 HBL1_DMSO_200M_050219_1,14185,VYMTEPIDEY False True VYMTEPIDEY 70.503349 630.279711902142 6268581.5 14173.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 6.093144575754802 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14186 70.511 400.0 209520.0 25 0 19909.0 + 12729 GVMDVNTAL 9 103 919.45490396662 918.44762750002 1 919.4551879763604 MULTI CID FTMS 0 0 0 14173 209503.234375 0.7036975671270825 2 -0.1356582641601562 13 Unmodified _GVMDVNTAL_ ENSG00000112306|ENST00000230050|RPS12;ENST00000484616.2_1_6:133135907-133136327:+|nuORF 65.23502041540118 0.0231836506122253 3 [VG]DMVNTA{I|L} 9 2 + 67.679 0.0 0.0 7.3688 7.3688 87.24 0.0 0.0 0.0 5.016894462103991 14.973024840566469 5.016894462103991 4.771212547196626 0 0.3494850021680094 1.154901959985743 1.079689690656103 0.8807196863200843 [VG]DMVNTA{I|L};[VG]DVMNTA{I|L};[MD]VGVNTA{I|L};[MD]VRNTA{I|L};[TP]{M(Oxidation (M))|F}GVNTA{I|L};[VG]DMGRTA{I|L};[VG]DMVGGTA{I|L};{[QS]|[NT]}A{[QS]|[NT]}NTA{I|L};[TP]{M(Oxidation (M))|F}RNTA{I|L};[MD]VRGGTA{I|L} 7.3688;6.8493;6.8226;6.1172;5.9753;5.6245;5.4073;5.331;5.27;5.1088 -;-;-;-;-;-;-;-;-;- 2882 1 1.189 57572.6 1.0 8648 5536 14173 HBL1_DMSO_200M_050219_1,14186 HBL1_DMSO_200M_050219_1,14186,GVMDVNTAL True True GVMDVNTAL 70.510534 919.45518797636 2892768.75 14173.0 ENSG00000112306|ENST00000230050|RPS12;;ENST00000484616.2_1_6:133135907-133136327:+|nuORF 2.3694764027992883 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14187 70.514 209.0 353670.0 25 0 50369.0 + 18728 LALDLSGEKKI 11 105 396.2394356769847 1185.6964776311545 3 396.2394592165947 MULTI CID FTMS 0 0 0 14173 203280.40625 0.8585120136750115 1 -0.0794906616210937 14 Unmodified _LALDLSGEKKI_ REV__ENSG00000006611|ENST00000005226|USH1C;REV__ENST00000529563.5_1_11:17515913-17538079:-|nuORF;REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C;REV__nc|ENSG00000006611|Q9Y6N9-4|USH1C;REV__nc|ENSG00000006611|Q9Y6N9|USH1C 11.631370582801994 0.793200706552726 3 [{I|L}A]{I|L}D 4 -1 38.94 0.0 0.0 3.2842 0.0 0.0 0.0 770.4428671402725 770.4428671402725 26.73393743112328 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]{I|L}D 3.2842 + + 161 + 1 1.189 64311.3 1.0 8649 5536 14173 HBL1_DMSO_200M_050219_1,14187 HBL1_DMSO_200M_050219_1,14187,LALDLSGEKKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14188 70.523 391.0 353330.0 25 0 23143.0 + 18327 KVLEPSETLVV 11 143 607.3561250359503 1212.6976971387005 2 607.3560668826103 MULTI CID FTMS 0 0 0 14173 199691.578125 0.2357574943895289 -3 0.23565673828125 15 Unmodified _KVLEPSETLVV_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON 34.221707139014875 0.3014076866608453 3 [DP]TT{I|L}VRT{I|L}VV 11 7 + 77.534 0.0 0.0 6.3935 6.3935 77.539 0.0 0.0 0.0 6.382721639824069 16.57577319177794 6.382721639824069 0.3959062302381255 0 0.8252574989159953 0.8239087409443188 1.9489700043360187 0.0 [DP]TT{I|L}VRT{I|L}VV;[DP]TT{I|L}VKE{I|L}VV;[PS]ET{I|L}VRT{I|L}VV;[PS]ET{I|L}VKE{I|L}VV;[DP]TT{I|L}V[VG]T{I|L}VV;{[QN]|[E{I|L}]|[KN]}[DG]{I|L}VRT{I|L}VV;{[QN]|[E{I|L}]|[KN]}[DG]{I|L}VKE{I|L}VV;[DP]TT{I|L}V[SG]{I|L}{I|L}VV;[PS]ET{I|L}V[VG]T{I|L}VV;{[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}VRT{I|L}VV 6.3935;6.3608;5.8672;5.8345;5.6407;5.499;5.4664;5.2473;5.1144;5.082 -;-;-;-;-;-;-;-;-;- 2286 1 1.189 106036.1 1.0 8650 5536 14173 HBL1_DMSO_200M_050219_1,14188 HBL1_DMSO_200M_050219_1,14188,KVLEPSETLVV False True KVLEPSETLVV 70.522684 607.35606688261 15430677.0 14173.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-8|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-9|SON 6.413307348887126 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14189 70.53 432.0 177520.0 25 0 14728.0 + 24126 LYPHEPTAVF 10 118 587.3006861325359 1172.5868193318718 2 587.2978393435478 MULTI CID FTMS 0 0 0 14173 181811.546875 0.9308972381183775 -3 0.23565673828125 16 Unmodified _LYPHEPTAVF_ ENSG00000159147|ENST00000303071|DONSON 30.63653989081413 0.2803493085145199 3 [Y{I|L}]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[TP]AV{M(Oxidation (M))|F} 10 3 + 49.857 0.0 0.0 4.2518 4.2518 69.927 0.0 0.0 0.0 2.4865124202832334 10.001225267833997 2.4865124202832334 0.0269751594335332 0 1.174742501084005 1.6989700043360187 0.3494850021680094 0.0 [Y{I|L}]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[TP]AV{M(Oxidation (M))|F};[Y{I|L}][{M(Oxidation (M))|F}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}V{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EY{I|L}[TP]AV{M(Oxidation (M))|F};[{I|L}V][Y{M(Oxidation (M))|F}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}V{M(Oxidation (M))|F};[Y{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[{M(Oxidation (M))|F}D]|MM}V{M(Oxidation (M))|F};[Y{I|L}]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[TP]G{I|L}{M(Oxidation (M))|F};[Y{I|L}][{M(Oxidation (M))|F}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}V{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EY{I|L}[TP]G{I|L}{M(Oxidation (M))|F};[{I|L}V][Y{M(Oxidation (M))|F}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}V{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}P[WQ][TP]AV{M(Oxidation (M))|F} 4.2518;4.2495;4.0398;3.6306;3.3989;3.2695;3.2672;3.0575;2.6483;2.5822 -;-;-;-;-;-;-;-;-;- 355 1 1.189 63107.3 1.0 8651 5536 14173 HBL1_DMSO_200M_050219_1,14189 HBL1_DMSO_200M_050219_1,14189,LYPHEPTAVF False True LYPHEPTAVF 70.530382 587.297839343548 3246721.0 14173.0 ENSG00000159147|ENST00000303071|DONSON 5.416762828826904 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14190 70.538 441.0 448840.0 25 0 30974.0 + 42079 VQVWPVRQV 9 178 555.8240822448097 1109.6336115564193 2 555.8224975466728 MULTI CID FTMS 0 0 0 14173 172610.546875 0.7136249634614484 -2 0.1948776245117187 17 Unmodified _VQVWPVRQV_ ENSG00000114573|ENST00000273398|ATP6V1A;nc|ENSG00000114573|P38606-2|ATP6V1A 46.020951573049366 0.0490941689151868 3 {[QV]|[N{I|L}]|[RA]|[KV]}VWVQK 7 3 49.622 0.0 0.0 4.4719 0.0 0.0 0.0 239.104303228186 239.104303228186 32.48942290938689 0.0 0.0 0.0 0 1.2614393726401687 1.154901959985743 0.0 0.75 {[QV]|[N{I|L}]|[RA]|[KV]}VWVQK 4.4719 - 1857 + 1 1.189 156498.0 1.0 8652 5536 14173 HBL1_DMSO_200M_050219_1,14190 HBL1_DMSO_200M_050219_1,14190,VQVWPVRQV True True VQVWPVRQV 70.53823 555.822497546673 3249197.5 14173.0 nc|ENSG00000114573|P38606-2|ATP6V1A;;ENSG00000114573|ENST00000273398|ATP6V1A 7.082609335581462 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14192 70.542 3.5 8525200.0 25 0 1724000.0 + -1 MVAMMLGRL 9 45 527.2677912746994 1052.5210296161988 2 527.2682983279228 MULTI CID FTMS 0 0 0 14191 10959368.0 0.3150349197252783 3 -0.2496490478515625 1 2 Oxidation (M) _MVAM(Oxidation (M))M(Oxidation (M))LGRL_ REV__ENSG00000158865|ENST00000424767|SLC5A11;REV__ENSG00000198743|ENST00000381151|SLC5A3;REV__nc|ENSG00000158865|Q8WWX8-2|SLC5A11;REV__nc|ENSG00000158865|Q8WWX8-3|SLC5A11;REV__nc|ENSG00000158865|Q8WWX8-4|SLC5A11;REV__nc|ENSG00000158865|Q8WWX8-5|SLC5A11 13.50788311687929 0.4710407108020397 3 ET{M(Oxidation (M))|F} 3 -1 20.445 0.0 0.0 1.9425 0.0 0.0 361.2011576452988 311.13694177799067 672.3380994232895 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 ET{M(Oxidation (M))|F} 1.9425 - 63 + 1 1.189 28535.3 1.0 8653 5537 14191 HBL1_DMSO_200M_050219_1,14192 HBL1_DMSO_200M_050219_1,14192,MVAMMLGRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14193 70.544 7.0 6273400.0 25 0 2004300.0 -1 0 25 1066.095663410906 3195.265160832919 3 1066.430590808392 MULTI CID FTMS 0 0 0 14191 13996344.0 0.9238579799308074 1 -0.0561676025390625 2 3 {M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]YG 5 -1 12.218 0.0 0.0 0.38239 0.0 0.0 1020.3617927682684 1481.6391341992055 2502.000926967474 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]YG 0.38239 - 13 + 1 1.189 50519.7 1.0 8654 5537 14191 HBL1_DMSO_200M_050219_1,14193 HBL1_DMSO_200M_050219_1,14193, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14194 70.545 9.9 3095300.0 25 0 304100.0 + 34356 SLSTVPLPTV 10 53 507.2973811120535 1012.580209290907 2 507.2975036501884 MULTI CID FTMS 0 0 0 14191 4623692.5 1.0 0 0.0 3 Unmodified _SLSTVPLPTV_ REV__ENSG00000145113|ENST00000463781|MUC4;REV__nc|ENSG00000145113|Q99102-10|MUC4;REV__nc|ENSG00000145113|Q99102-11|MUC4;REV__nc|ENSG00000145113|Q99102-15|MUC4;REV__nc|ENSG00000145113|Q99102-16|MUC4;REV__nc|ENSG00000145113|Q99102-17|MUC4;REV__nc|ENSG00000145113|Q99102-2|MUC4;REV__nc|ENSG00000145113|Q99102-3|MUC4;REV__nc|ENSG00000145113|Q99102-5|MUC4;REV__nc|ENSG00000145113|Q99102-7|MUC4;REV__nc|ENSG00000145113|Q99102-8|MUC4;REV__nc|ENSG00000145113|Q99102-9|MUC4 14.838274106304384 0.5985701837916485 3 [EP]{I|L}EVKVTV 9 -1 + 52.907 0.0 0.0 5.2249 5.2249 86.479 0.0 0.0 0.0 11.25604934863771 8.824995917031941 8.824995917031941 11.25604934863771 0 0.8182503180159344 0.8860566476931632 0.0 0.0 [EP]{I|L}EVKVTV;{[TV]|[{I|L}S]}[HM]VKVTV 5.2249;4.1133 -;- 57 1 1.189 30105.6 1.0 8655 5537 14191 HBL1_DMSO_200M_050219_1,14194 HBL1_DMSO_200M_050219_1,14194,SLSTVPLPTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14195 70.546 9.2 4087200.0 25 0 581220.0 + 21733 LPLVGQLF 8 63 443.7734510303929 885.5323491275858 2 443.7736694216728 MULTI CID FTMS 0 0 0 14191 4629742.5 0.270896655779097 21 -1.7047805786132812 4 Unmodified _LPLVGQLF_ REV__ENST00000554467.5_1_12:57625133-57626138:+|nuORF 19.438996006549623 0.6237395211498085 3 {I|L}P 2 -1 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3734950181533 672.3734950181533 19.8940094072303 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}P 5.0564 + + 58 + 1 1.189 36673.0 1.0 8656 5537 14191 HBL1_DMSO_200M_050219_1,14195 HBL1_DMSO_200M_050219_1,14195,LPLVGQLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14196 70.547 17.0 2714700.0 25 0 422810.0 + 25626 NFPEKISSL 9 78 517.7790773719883 1033.5436018107764 2 517.7798339724541 MULTI CID FTMS 0 0 0 14191 2621785.0 0.626318673758201 6 -0.5225143432617188 5 Unmodified _NFPEKISSL_ ENST00000420672.1_1_2:179278757-179278808:+|nuORF 27.628801355627647 0.1796483985696185 3 [EP]K{I|L}SS{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 9 4 + 37.101 0.0 0.0 3.5897 3.5897 83.117 0.0 0.0 0.0 8.384767769392745 13.112927764442304 8.384767769392745 20.786728014391464 0 0.0 0.0 0.4247425010840047 0.0 [EP]K{I|L}SS{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PEK{[TV]|[{I|L}S]}S{I|L};[EP]K{I|L}{[WT]|[RM]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[EP]K{[WT]|[RM]}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[H{I|L}]{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]} 3.5897;1.5785;1.4399;1.029;0.28535 -;+;-;-;- + 67 1 1.189 41117.5 1.0 8657 5537 14191 HBL1_DMSO_200M_050219_1,14196 HBL1_DMSO_200M_050219_1,14196,NFPEKISSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14197 70.548 27.0 1575300.0 25 0 405900.0 + 27341 PHSSPLALL 9 68 467.7714589396702 933.5283649461404 2 467.7715331912041 MULTI CID FTMS 0 0 0 14191 2050241.875 0.0641126333893601 6 -0.5225143432617188 6 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 30.22481116460888 0.1466181017706357 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 9 4 + 44.683 0.0 0.0 4.7865 4.7865 85.221 0.0 0.0 0.0 5.642492736872597 34.22553429749129 5.642492736872597 12.257724967479852 0 0.9247425010840048 0.0 1.2302046884880935 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]{I|L}[PS]{I|L} 4.7865;3.4734 -;- 69 1 1.189 39004.1 1.0 8658 5537 14191 HBL1_DMSO_200M_050219_1,14197 HBL1_DMSO_200M_050219_1,14197,PHSSPLALL False True PHSSPLALL 70.54833 467.771533191204 226781120.0 14191.0 ENST00000517495.1_1_8:41132739-41134502:-|nuORF 0.9545341730117798 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14198 70.55 33.0 2424500.0 25 0 290800.0 -1 0 68 320.211539464139 319.204262997539 1 320.2113220095634 MULTI CID FTMS 0 0 0 14191 1464649.25 0.2173485936218806 16 -1.1649551391601562 7 3 PH 2 -1 32.925 0.0 0.0 10.315 0.0 0.0 0.0 82.06694971256093 82.06694971256093 3.711665988073712 0.0 0.0 0.0 0 0.7396518287104438 1.154901959985743 0.0 0.0 PH 10.315 - 13 + 1 1.189 69804.0 1.0 8659 5537 14191 HBL1_DMSO_200M_050219_1,14198 HBL1_DMSO_200M_050219_1,14198, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14199 70.551 23.0 1374100.0 25 0 156050.0 + 23294 LSYSQAVTV 9 53 484.25839615362605 966.502239374052 2 484.2586852908134 MULTI CID FTMS 0 0 0 14191 1399835.5 0.0033076478004241 42 -3.215316772460937 8 Unmodified _LSYSQAVTV_ REV__ENSG00000115145|ENST00000263904|STAM2 15.847184025352805 0.4077185912009129 3 CTV 3 -1 25.674 0.0 0.0 2.6564 0.0 0.0 645.3697148152615 0.0 645.3697148152615 0.0 13.455612550363796 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 CTV 2.6564 - 27 + 1 1.189 33152.5 1.0 8660 5537 14191 HBL1_DMSO_200M_050219_1,14199 HBL1_DMSO_200M_050219_1,14199,LSYSQAVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14200 70.552 24.0 2538600.0 25 0 316280.0 + 43032 VYAFSARPL 9 64 512.2849883953116 1022.5554238574232 2 512.2848388552666 MULTI CID FTMS 0 0 0 14191 1335081.125 0.8140045546427183 1 -0.0561676025390625 9 Unmodified _VYAFSARPL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 20.580933911654288 0.2795815587326093 3 VYA{M(Oxidation (M))|F}S 5 4 67.206 0.0 0.0 6.5724 0.0 0.0 0.0 452.2619417779906 452.2619417779906 55.78624190245479 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VYA{M(Oxidation (M))|F}S 6.5724 + + 92 + 1 1.189 51128.9 1.0 8661 5537 14191 HBL1_DMSO_200M_050219_1,14200 HBL1_DMSO_200M_050219_1,14200,VYAFSARPL False True VYAFSARPL 70.551865 512.284838855267 51245988.0 14191.0 nc|ENSG00000233276|P07203-2|GPX1;;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;;ENSG00000233276|ENST00000419783|GPX1 6.698068459828694 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14201 70.553 21.0 2071800.0 25 0 239110.0 + 2204 AQAPSSFQL 9 76 474.74309989798377 947.4716468627676 2 474.7433959841728 MULTI CID FTMS 0 0 0 14191 1270222.625 1.0 0 0.0 10 Unmodified _AQAPSSFQL_ ENSG00000100714|ENST00000652337|MTHFD1 34.10243960390752 0.1078313939113124 3 [QA]A 3 6 18.2 0.0 0.0 1.9209 0.0 0.0 0.0 674.3157990446613 674.3157990446613 1.9800275444741933 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 + [QA]A 1.9209 + + 47 1 1.189 37522.4 1.0 8662 5537 14191 HBL1_DMSO_200M_050219_1,14201 HBL1_DMSO_200M_050219_1,14201,AQAPSSFQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14202 70.554 18.0 2557100.0 25 0 231610.0 + 9003 FAYRMGVTV 9 81 522.2716315168842 0 522.2712280154228 PEAK CID FTMS 0 0 0 14191 972252.0 0.4623612116715946 -2 0.1412353515625 11 Unmodified _FAYRMGVTV_ ENST00000420697.1_3_7:97880760-97881394:-|nuORF;ENST00000423128.5_3_7:97880760-97881154:-|nuORF;ENST00000447648.6_1_7:97880760-97881562:-|nuORF 32.78568957990786 0.0971838787772021 3 T 1 8 16.594 0.0 0.0 1.5917 0.0 0.0 117.07945449043125 821.3788284689855 938.4582829594168 0.0 0.0 0.0 0.0 0 1.0 0.0 0.2614393726401688 0.0 + T 1.5917 + + 13 1 1.189 41185.6 1.0 8663 5537 14191 HBL1_DMSO_200M_050219_1,14202 HBL1_DMSO_200M_050219_1,14202,FAYRMGVTV True True FAYRMGVTV 70.554221 522.271228015423 16880260.0 14191.0 ENST00000420697.1_3_7:97880760-97881394:-|nuORF;;ENST00000423128.5_3_7:97880760-97881154:-|nuORF;;ENST00000447648.6_1_7:97880760-97881562:-|nuORF 6.529532909393311 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14203 70.555 30.0 1710100.0 25 0 107150.0 + 26182 NQFPGFKEV 9 86 533.2720326860506 1064.529512438901 2 533.2715331912041 MULTI CID FTMS 0 0 0 14191 956308.5 0.0257377681960339 11 -0.7998733520507812 12 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 20.41453444215458 0.284085796332423 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}K[WP] 8 4 + 37.664 0.0 0.0 3.5381 3.5381 81.202 0.0 0.0 0.0 15.72559982972642 6.400108074697322 6.400108074697322 10.538500383907344 0 0.9247425010840048 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}K[WP];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[PG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[TV]|[{I|L}S]}{[CP]|[EA]}{M(Oxidation (M))|F}[HS];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[CP]|[EA]}T[VG]TV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[PG][{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[PG]{M(Oxidation (M))|F}[VG]TV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[TV]|[{I|L}S]}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HS];{[QN]|[E{I|L}]|[KN]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}T[VG]TV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[PG][R{M(Oxidation (M))|F}]TV 3.5381;2.5481;1.115;1.0978;0.74119;0.72402;0.71601;0.69885;0.39319 -;-;-;-;-;-;-;-;- 180 + 1 1.189 46564.5 1.0 8664 5537 14191 HBL1_DMSO_200M_050219_1,14203 HBL1_DMSO_200M_050219_1,14203,NQFPGFKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14204 70.557 29.0 951880.0 25 0 132880.0 + 8996 FAYDGKDYL 9 56 546.2560891803822 1090.4976254275643 2 546.2564575076103 MULTI CID FTMS 0 0 0 14191 881122.875 1.0 0 0.0 13 Unmodified _FAYDGKDYL_ ENSG00000204592|ENST00000376630|HLA-E 9.38312468134398 0.5871240394367778 3 DY{[CP]|[EA]} 4 8 14.693 0.0 0.0 1.3473 0.0 0.0 594.302537986525 0.0 594.302537986525 0.0 3.433677739595033 0.0 0.0 0 0.0 0.0 0.0 0.0 DY{[CP]|[EA]} 1.3473 - 24 1 1.189 26926.2 1.0 8665 5537 14191 HBL1_DMSO_200M_050219_1,14204 HBL1_DMSO_200M_050219_1,14204,FAYDGKDYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14205 70.558 21.0 2027100.0 25 0 160270.0 + 42989 VVVDPIQSV 9 96 478.2765603017722 954.5385676703444 2 478.2752868533134 MULTI CID FTMS 0 0 0 14191 1013265.5 0.210216326043283 -4 0.3151473999023437 14 Unmodified _VVVDPIQSV_ ENSG00000115233|ENST00000409682|PSMD14 23.1484247019978 0.2366544122328345 3 VV[DP]V 5 4 19.321 0.0 0.0 2.0242 0.0 0.0 0.0 442.2320850866132 442.2320850866132 3.4814874725059664 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 VV[DP]V 2.0242 - 111 1 1.189 39007.1 1.0 8666 5537 14191 HBL1_DMSO_200M_050219_1,14205 HBL1_DMSO_200M_050219_1,14205,VVVDPIQSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14206 70.56 110.0 581540.0 25 0 88198.0 + 32510 SALNEVHLV 9 88 491.2723600893887 980.5301672455774 2 491.2729369997978 MULTI CID FTMS 0 0 0 14191 640525.9375 0.4038722481800081 -2 0.1412353515625 15 Unmodified _SALNEVHLV_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 54.773552608820026 0.0299037012502309 3 {[SA]|[TG]}{I|L}NEVH{I|L}V 9 0 + 66.054 0.0 0.0 6.7366 6.7366 85.001 0.0 0.0 0.0 24.13734275855269 4.3933269383026285 4.3933269383026285 4.3933269383026285 0 0.75 1.6989700043360187 0.3494850021680094 0.4247425010840047 + + {[SA]|[TG]}{I|L}NEVH{I|L}V;{[SA]|[TG]}{I|L}NEVHV{I|L};{[SA]|[TG]}{I|L}GGEVH{I|L}V;{[SA]|[TG]}{I|L}NE[H{I|L}]VV;{[SA]|[TG]}{I|L}GGEVHV{I|L};{[SA]|[TG]}{I|L}GGE[H{I|L}]VV;[{I|L}P][KQ]EN[RP];[H{I|L}]V[{M(Oxidation (M))|F}V]N[RP];[HV]{I|L}[{M(Oxidation (M))|F}V]N[RP];[{I|L}P][KQ]EGG[RP] 6.7366;6.2885;5.3643;4.9823;4.9163;3.61;2.2638;1.9769;1.6699;1.3192 +;-;-;-;-;-;-;-;-;- + 346 + 1 1.189 53946.7 1.0 8667 5537 14191 HBL1_DMSO_200M_050219_1,14206 HBL1_DMSO_200M_050219_1,14206,SALNEVHLV True True SALNEVHLV 70.560067 491.272936999798 24563248.0 14191.0 nc|ENSG00000127481|Q5T4S7-2|UBR4;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4 8.316287994384766 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14207 70.567 407.0 268850.0 25 0 56379.0 -1 0 59 1107.1136702808817 3318.319181442845 3 1107.783129870892 MULTI CID FTMS 0 0 0 14191 497219.59375 0.1000321176047275 6 -0.5225143432617188 16 3 YC(Carbamidomethyl (C)) 2 -1 9.464 0.0 0.0 0.2852 0.0 0.0 1457.5214041985075 1534.6640108697875 2992.1854150682952 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YC(Carbamidomethyl (C)) 0.2852 - 52 + 1 1.189 99378.5 1.0 8668 5537 14191 HBL1_DMSO_200M_050219_1,14207 HBL1_DMSO_200M_050219_1,14207, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14208 70.569 59.0 347280.0 25 0 28313.0 + 6436 EAELRRTL 8 49 494.2829219013761 986.5512908695522 2 494.2829467654228 MULTI CID FTMS 0 0 0 14191 362583.3125 0.1767609418827783 6 -0.5225143432617188 17 Unmodified _EAELRRTL_ REV__chr20:34515645-34526268|11|14.55|0.59|4.62|+|0|None,DYNLRB1|1 10.183394434864962 0.7604730176254005 3 T{I|L} 2 -1 13.984 0.0 0.0 1.4175 0.0 0.0 754.4091685324413 0.0 754.4091685324413 0.0 3.605880963114565 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T{I|L} 1.4175 + + 17 + 1 1.189 22212.9 1.0 8669 5537 14191 HBL1_DMSO_200M_050219_1,14208 HBL1_DMSO_200M_050219_1,14208,EAELRRTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14209 70.576 400.0 325250.0 25 0 42092.0 + 37925 TLYERGFENI 10 148 621.3120421789007 0 621.3120605349541 PEAK CID FTMS 0 0 0 14191 291522.6875 0.6901575201894945 1 -0.0561676025390625 18 Unmodified _TLYERGFENI_ ENSG00000119777|ENST00000238788|TMEM214;ENST00000478980.1_1_2:27256012-27257182:+|nuORF;ENST00000495312.1_1_2:27255799-27258254:+|nuORF;nc|ENSG00000119777|Q6NUQ4-2|TMEM214 57.10758569107544 0.0281477372195156 3 {I|L}YEN[W{I|L}]W 7 7 27.554 0.0 0.0 2.221 0.0 0.0 101.0449084771388 132.04586206607658 233.0907705432154 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.3252574989159953 0.3494850021680094 {I|L}YEN[W{I|L}]W 2.221 - 853 + 1 1.189 97254.5 1.0 8670 5537 14191 HBL1_DMSO_200M_050219_1,14209 HBL1_DMSO_200M_050219_1,14209,TLYERGFENI True True TLYERGFENI 70.576007 621.312060534954 4155404.25 14191.0 ENST00000495312.1_1_2:27255799-27258254:+|nuORF;;ENSG00000119777|ENST00000238788|TMEM214;;nc|ENSG00000119777|Q6NUQ4-2|TMEM214;;ENST00000478980.1_1_2:27256012-27257182:+|nuORF 6.125132083892822 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14210 70.584 469.0 224460.0 25 0 40458.0 -1 ISCSNHYNSV 10 138 590.7541019652227 1179.4936509972454 2 590.7561523318291 MULTI CID FTMS 0 0 0 14191 174348.3125 0.1847528297670579 3 -0.2496490478515625 19 Carbamidomethyl (C) _ISC(Carbamidomethyl (C))SNHYNSV_ ENSG00000110422|ENST00000303296|HIPK3;nc|ENSG00000110422|Q9H422-2|HIPK3 17.11289562659939 0.5604042439455784 3 [YN]{I|L} 3 -1 17.658 0.0 0.0 1.4971 0.0 0.0 0.0 786.2798502982797 786.2798502982797 5.668341737066001 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [YN]{I|L} 1.4971 - 345 1 1.189 81811.6 1.0 8671 5537 14191 HBL1_DMSO_200M_050219_1,14210 HBL1_DMSO_200M_050219_1,14210,ISCSNHYNSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14211 70.594 565.0 152370.0 25 0 44400.0 -1 0 51 1096.7825806484386 3287.325912545516 3 1097.116015613079 MULTI CID FTMS 0 0 0 14191 173408.8125 0.510738182945757 6 -0.5225143432617188 20 3 C(Carbamidomethyl (C))TT 3 -1 11.925 0.0 0.0 0.36275 0.0 0.0 2307.8864116683662 614.2961744087494 2922.1825860771155 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 C(Carbamidomethyl (C))TT 0.36275 - 56 + 1 1.189 74599.2 1.0 8672 5537 14191 HBL1_DMSO_200M_050219_1,14211 HBL1_DMSO_200M_050219_1,14211, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14213 70.604 363.0 283230.0 25 0 53820.0 -1 0 78 1074.0827817526008 3219.2265158580026 3 1074.416918933392 MULTI CID FTMS 0 0 0 14212 522609.65625 0.4383830634680086 2 -0.1934814453125 1 3 E 1 -1 5.7268 0.0 0.0 0.17789 0.0 0.0 2701.093228359759 386.0677125700295 3087.1609409297885 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 E 0.17789 - 66 + 1 1.197 91590.6 1.0 8673 5538 14212 HBL1_DMSO_200M_050219_1,14213 HBL1_DMSO_200M_050219_1,14213, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14214 70.608 168.0 875080.0 25 0 130460.0 -1 0 127 345.7187510121898 689.4229490911796 2 345.7184326052666 MULTI CID FTMS 0 0 0 14212 624106.75 0.7319294234043805 -1 0.0561676025390625 2 3 [{I|L}A]R{M(Oxidation (M))|F}{I|L}A 6 -1 + 53.733 0.0 0.0 7.794 7.794 96.451 0.0 0.0 0.0 13.93487407009752 29.82016661481893 13.93487407009752 33.24439342304099 0 1.1549471895720984 2.0 0.0 0.0 [{I|L}A]R{M(Oxidation (M))|F}{I|L}A;{[MG]|[TS]}RKKA 7.794;2.9719 -;- 70 1 1.197 119198.4 1.0 8674 5538 14212 HBL1_DMSO_200M_050219_1,14214 HBL1_DMSO_200M_050219_1,14214, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14215 70.61 89.0 1168600.0 25 0 141140.0 22788 LQRYRVWL 8 122 567.3301507522747 1132.6457485713493 2 567.3303710818291 MULTI CID FTMS 0 0 0 14212 606236.875 0.3838778118174396 -3 0.1974029541015625 3 Unmodified _LQRYRVWL_ ENST00000264645.11_1_17:38326709-38326796:+|nuORF 8.593279151180031 0.7721714526254883 3 [Q{I|L}]R{[CP]|[EA]}{M(Oxidation (M))|F}EQ 8 5 41.578 0.0 0.0 3.6709 0.0 0.0 0.0 128.13266198371176 128.13266198371176 17.448500216800937 0.0 0.0 0.0 0 0.0 0.7958800173440752 1.25 1.1989700043360187 [Q{I|L}]R{[CP]|[EA]}{M(Oxidation (M))|F}EQ 3.6709 - 239 1 1.197 83574.4 1.0 8675 5538 14212 HBL1_DMSO_200M_050219_1,14215 HBL1_DMSO_200M_050219_1,14215,LQRYRVWL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14216 70.617 436.0 742120.0 25 0 155500.0 -1 0 103 1052.419999295984 3154.2381684881525 3 1052.756274402142 MULTI CID FTMS 0 0 0 14212 522290.6875 0.4030846111718285 -1 0.0561676025390625 4 3 YG[WY]T{I|L}ET{M(Oxidation (M))|F}KD[WP] 13 -1 67.512 0.0 0.0 2.1404 0.0 0.0 1449.4888000537285 0.0 1449.4888000537285 0.0 42.55404347710736 0.0 0.0 0 0.0 0.0 1.873712505420024 0.805462187404089 YG[WY]T{I|L}ET{M(Oxidation (M))|F}KD[WP] 2.1404 - 6427 + 1 1.197 251562.2 1.0 8676 5538 14212 HBL1_DMSO_200M_050219_1,14216 HBL1_DMSO_200M_050219_1,14216, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14217 70.62 142.0 925140.0 25 0 74120.0 + 39762 EVIEKFDYV 9 141 571.2863532668998 1140.5581536005996 2 571.2927123904228 MULTI CID FTMS 0 0 0 14212 397525.625 0.0414997865117162 -6 0.542510986328125 5 Unmodified _VELSPEELPE_ ENST00000482178.5_1_22:41980283-41980722:-|nuORF;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;ENST00000472620.5_1_22:41980283-41985061:-|nuORF;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;ENSG00000100417|ENST00000216259|PMM1 43.85829265575387 0.1168243637355526 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}VY{[WS]|[C(Carbamidomethyl (C)){I|L}]}V 9 6 + 46.019 0.0 0.0 4.0348 4.0348 71.742 0.0 0.0 0.0 6.727298587440082 1.477294284664545 1.477294284664545 1.477294284664545 0 0.0 2.0 0.5138793319624578 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}VY{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}EV[DV][EP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}YV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}EV[YQ]YV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}Y{I|L}T{I|L}[C(Carbamidomethyl (C))M];{NN|[MP]|[D{I|L}]|[EV]}{I|L}E[H{I|L}]{[DS]|[MA]|[CV]|TT}TV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}C(Carbamidomethyl (C))Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[KA];{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}VY[QP]{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{I|L}C(Carbamidomethyl (C)){[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y[KA];{NN|[MP]|[D{I|L}]|[EV]}{I|L}E{[WN]|[YH]}[VG]PV 4.0348;3.9053;3.8946;3.7225;3.2412;3.0266;2.9124;2.8619;2.8274;2.6176 -;-;-;-;-;-;-;-;-;- 2166 + 1 1.197 102891.6 1.0 8677 5538 14212 HBL1_DMSO_200M_050219_1,14217 HBL1_DMSO_200M_050219_1,14217,VELSPEELPE True False EVIEKFDYV 70.620169 571.292712390423 13229919.0 14212.0 ENST00000482178.5_1_22:41980283-41980722:-|nuORF;;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;;ENST00000472620.5_1_22:41980283-41985061:-|nuORF;;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;;ENSG00000100417|ENST00000216259|PMM1 5.293596824010213 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14218 70.622 106.0 1236400.0 25 0 96325.0 + 42552 VTPEGLQMV 9 164 487.2549295801472 972.4953062270944 2 487.2555114626884 MULTI CID FTMS 0 0 0 14212 358853.0625 0.8202636947552487 -1 0.0561676025390625 6 Unmodified _VTPEGLQMV_ ENSG00000128050|ENST00000512576|PAICS;nc|ENSG00000128050|P22234-2|PAICS 37.97399986684836 0.0865783450051559 3 [EP]G{I|L}QTVMV 9 4 + 48.551 0.0 0.0 4.9924 4.9924 76.553 0.0 0.0 0.0 2.6550480470669555 2.6550480470669555 2.6550480470669555 2.6550480470669555 0 0.6435078169319297 0.7695510786217261 1.110924374808178 0.0 [EP]G{I|L}QTVMV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}TQ[HQ]{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}T[Y{I|L}]MV;[EP]G{I|L}S{I|L}QMV;{[TV]|[{I|L}S]}[PA]D{I|L}QMV;{NN|[MP]|[D{I|L}]|[EV]}[PA]QTVMV;[EP]G{I|L}[AG]TVMV;{[TV]|[{I|L}S]}[PG]E{I|L}QMV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}T[Y{I|L}]VM;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}T[AG][HQ]{I|L} 4.9924;4.7194;4.4374;4.3189;4.2739;4.2657;4.0455;3.7832;3.7757;3.767 -;-;-;-;-;-;-;-;-;- 2583 1 1.197 102599.4 1.0 8678 5538 14212 HBL1_DMSO_200M_050219_1,14218 HBL1_DMSO_200M_050219_1,14218,VTPEGLQMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14219 70.631 490.0 353910.0 25 0 27773.0 + 18080 KTIDDLEETL 10 175 588.8038598587466 1175.593166784293 2 588.8038818240166 MULTI CID FTMS 0 0 0 14212 262444.25 0.0554549875558986 -3 0.1974029541015625 7 Unmodified _KTIDDLEETL_ nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2 84.5221896805406 0.0133617038110099 3 [{I|L}T]KDD{I|L}EET{I|L} 10 2 + 106.59 0.0 0.0 9.0672 9.0672 96.277 0.0 0.0 0.0 14.771212547196626 55.28518564608802 14.771212547196626 12.98455006504028 0 1.174742501084005 1.3979400086720375 2.750226068323236 0.0 [{I|L}T]KDD{I|L}EET{I|L};[{I|L}T]KDD{I|L}ETE{I|L};{[QN]|[E{I|L}]|[KN]}DSK{I|L}EET{I|L};[{I|L}T]E[QT]{I|L}EET{I|L};{NN|[MP]|[D{I|L}]|[EV]}DTK{I|L}EET{I|L};[{I|L}T]DDK{I|L}EET{I|L};EEVSK{I|L}EET{I|L};{[QN]|[E{I|L}]|[KN]}[KS]D{I|L}EET{I|L};{[QN]|[E{I|L}]|[KN]}T[QT]{I|L}EET{I|L};[KT]{I|L}DD{I|L}EET{I|L} 9.0672;7.9627;7.7493;7.6211;7.5995;7.5788;7.5658;7.5116;7.2209;7.1733 -;-;-;-;-;-;-;-;-;+ + 9985 1 1.197 133657.4 1.0 8679 5538 14212 HBL1_DMSO_200M_050219_1,14219 HBL1_DMSO_200M_050219_1,14219,KTIDDLEETL True True KTIDDLEETL 70.631084 588.803881824017 99671460.0 14212.0 nc|ENSG00000198467|P07951-2|TPM2;;nc|ENSG00000198467|P07951-3|TPM2 4.889629443486531 2.0 True 10.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14220 70.633 64.0 632410.0 25 0 62156.0 -1 LLWQCSSL 8 72 503.7540381284351 1005.4935233236702 2 503.7549011111259 MULTI CID FTMS 0 0 0 14212 245220.0 0.1508804280913736 -3 0.1974029541015625 8 Carbamidomethyl (C) _LLWQC(Carbamidomethyl (C))SSL_ ENST00000521174.5_1_5:154237410-154238212:+|nuORF 10.183394434864962 0.7604730176254005 3 S{I|L} 2 -1 21.211 0.0 0.0 2.1095 0.0 0.0 787.3662783058952 0.0 787.3662783058952 0.0 9.61758134947864 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 S{I|L} 2.1095 + + 114 + 1 1.197 37220.4 1.0 8680 5538 14212 HBL1_DMSO_200M_050219_1,14220 HBL1_DMSO_200M_050219_1,14220,LLWQCSSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14221 70.643 582.0 137990.0 25 0 17808.0 -1 0 86 987.1330930577936 2958.377449773581 3 987.4691039919852 MULTI CID FTMS 0 0 0 14212 243282.1875 1.0 0 0.0 9 3 T 1 -1 7.8567 0.0 0.0 0.26557 0.0 0.0 2102.9036471386185 751.3992403619749 2854.302887500593 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 T 0.26557 - 129 + 1 1.197 63045.1 1.0 8681 5538 14212 HBL1_DMSO_200M_050219_1,14221 HBL1_DMSO_200M_050219_1,14221, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14222 70.655 711.0 355800.0 25 0 23376.0 6787 EEAGPSRV 8 202 422.7134794332935 843.412405933387 2 422.7139465212822 MULTI CID FTMS 0 0 0 14212 201748.1875 0.6978266654762288 -1 0.0561676025390625 10 Unmodified _EEAGPSRV_ ENST00000372146.4_1_9:135564339-135564453:+|nuORF 20.453626601364224 0.6087503291685402 3 EEA{M(Oxidation (M))|F}VH{I|L} 7 5 EE + + 29.667 18.468 7.1558 3.5175 3.5175 51.274 0.0 0.0 0.0 0.0 10.299119976152554 0.0 0.0 0 0.25 0.0 0.0 0.0 EEA{M(Oxidation (M))|F}VH{I|L} 3.5175 - 256 + 1 1.197 195217.7 1.0 8682 5538 14212 HBL1_DMSO_200M_050219_1,14222 HBL1_DMSO_200M_050219_1,14222,EEAGPSRV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14223 70.666 608.0 140100.0 25 0 8364.1 -1 0 89 809.3104025990518 3233.212504529807 4 809.8128539919853 MULTI CID FTMS 0 0 0 14212 168955.953125 0.8960173264129107 1 -0.1398544311523437 11 3 M 1 -1 4.6041 0.0 0.0 0.1424 0.0 0.0 2227.756119088749 871.3748654663059 3099.130984555055 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.1424 - 59 + 1 1.197 65007.1 1.0 8683 5538 14212 HBL1_DMSO_200M_050219_1,14223 HBL1_DMSO_200M_050219_1,14223, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14224 70.681 790.0 226290.0 25 0 35565.0 + 11264 GETEQVQRDQL 11 194 434.88240850470754 0 434.8821594119072 PEAK CID FTMS 0 0 0 14212 139827.671875 0.5871912241103374 -8 0.739166259765625 12 Unmodified _GETEQVQRDQL_ REV__ENST00000464650.5_1_1:165737436-165738015:-|nuORF 5.731851221503515 0.47618401536486 3 {I|L}A 2 -1 7.0783 0.0 0.0 0.81571 0.0 0.0 98.34525902178888 582.2664278619749 680.6116868837638 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A 0.81571 - 39 + 1 1.197 142216.0 1.0 8684 5538 14212 HBL1_DMSO_200M_050219_1,14224 HBL1_DMSO_200M_050219_1,14224,GETEQVQRDQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14225 70.684 168.0 445690.0 25 0 49360.0 + 15276 IPHTPIEI 8 116 460.26587198949767 918.5171910457954 2 460.2681457400322 MULTI CID FTMS 0 0 0 14212 109278.75 0.224770869234611 -3 0.1974029541015625 13 Unmodified _IPHTPIEI_ ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR 49.66892048692302 0.1408045912742846 3 [{I|L}P]HTP{I|L}E{I|L} 8 0 + 55.861 0.0 0.0 6.0816 6.0816 88.889 0.0 0.0 0.0 9.788107009300616 16.40978057358332 9.788107009300616 9.788107009300616 0 0.3807196863200844 1.5228787452803376 1.0941876774005248 0.0 + + [{I|L}P]HTP{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}TP{I|L}E{I|L};[HT]P{I|L}P{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}P{I|L}E{I|L};[VS][YV]P{I|L}E{I|L};[{I|L}P]H[RH]{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[RH]{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP]P{I|L}{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KP][KA]E{I|L} 6.0816;5.016;4.9603;4.8243;3.9214;3.3261;2.2604;1.8465;1.3236 +;-;-;-;-;-;-;-;- + 245 1 1.197 62605.6 1.0 8685 5538 14212 HBL1_DMSO_200M_050219_1,14225 HBL1_DMSO_200M_050219_1,14225,IPHTPIEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14226 70.696 666.0 87347.0 25 0 3381.7 -1 NMEPYCCRETL 11 129 736.8005359272519 1471.5865189213037 2 737.3057128787041 MULTI CID FTMS 0 0 0 14212 118273.9140625 0.048677871382849 7 -0.5914306640625 14 2 Carbamidomethyl (C) _NMEPYC(Carbamidomethyl (C))C(Carbamidomethyl (C))RETL_ ENSG00000136014|ENST00000258499|USP44 5.296884461304476 0.8501568894076437 3 T{I|L} 2 -1 18.443 0.0 0.0 1.2533 0.0 0.0 1239.4435878683723 0.0 1239.4435878683723 0.0 7.023366956655028 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 T{I|L} 1.2533 + + 291 + 1 1.197 45145.3 1.0 8686 5538 14212 HBL1_DMSO_200M_050219_1,14226 HBL1_DMSO_200M_050219_1,14226,NMEPYCCRETL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14227 70.707 648.0 269440.0 25 0 31134.0 -1 0 113 653.1662615300017 652.1589850634017 1 653.1661865115166 MULTI CID FTMS 0 0 0 14212 102155.1015625 0.178446852427434 -3 0.1974029541015625 15 3 C(Carbamidomethyl (C))Q 2 -1 13.812 0.0 0.0 2.1179 0.0 0.0 346.07017714668126 0.0 346.07017714668126 0.0 1.8225812659254377 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))Q 2.1179 - 36 1 1.197 129637.9 1.0 8687 5538 14212 HBL1_DMSO_200M_050219_1,14227 HBL1_DMSO_200M_050219_1,14227, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14228 70.72 712.0 109550.0 25 0 5161.2 -1 WFWRWLRRLDC 11 95 847.4286987185478 0 847.4286987185478 PEAK CID FTMS 0 0 0 -1 0 16 Carbamidomethyl (C) _WFWRWLRRLDC(Carbamidomethyl (C))_ ENST00000339526.8_1_1:182360314-182360662:-|nuORF 0.0 0.4761840153648598 3 G{I|L}S 3 -1 7.6515 0.0 0.0 0.45199 0.0 0.0 1059.5276722400267 373.1532686822876 1432.6809409223142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 G{I|L}S 0.45199 - 165 + 1 1.197 59036.3 1.0 8688 5538 14212 HBL1_DMSO_200M_050219_1,14228 HBL1_DMSO_200M_050219_1,14228,WFWRWLRRLDC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14229 70.734 800.0 218850.0 25 0 32936.0 21954 LPPLRVGV 8 194 425.779391427193 849.544229921186 2 425.7791015505791 MULTI CID FTMS 0 0 0 14212 93842.078125 1.0 0 0.0 17 Unmodified _LPPLRVGV_ ENST00000360635.7_1_2:9563104-9563296:-|nuORF 24.67388899826682 0.525179942228231 3 {I|L}P{I|L}P 4 5 52.226 0.0 0.0 6.1476 0.0 0.0 0.0 426.2489412897094 426.2489412897094 39.46228515635716 0.0 0.0 0.0 0 0.4179050991403156 2.0 0.0 0.0 {I|L}P{I|L}P 6.1476 - 250 + 1 1.197 137552.6 0.8899999856948853 8689 5538 14212 HBL1_DMSO_200M_050219_1,14229 HBL1_DMSO_200M_050219_1,14229,LPPLRVGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14231 70.738 1.6 42308000.0 25 0 3324300.0 + 21774 LPNAVITRI 9 75 498.8137031573884 995.6128533815768 2 498.8142883181572 MULTI CID FTMS 0 0 0 14230 65130220.0 0.6667238425045753 -2 0.1960220336914062 1 Unmodified _LPNAVITRI_ ENSG00000148229|ENST00000374171|POLE3;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 45.739877483867886 0.0497104363764649 3 {I|L}PNAV{I|L}T[R{I|L}] 9 0 + 82.387 0.0 0.0 8.275 8.275 90.184 0.0 0.0 0.0 52.109178215846654 3.2568864632742844 3.2568864632742844 6.020599913279625 0 1.1307196863200843 1.6989700043360187 0.0 0.4247425010840047 + + {I|L}PNAV{I|L}T[R{I|L}];{I|L}PNA{I|L}VT[R{I|L}];{I|L}PGGAV{I|L}T[R{I|L}];{I|L}PGGA{I|L}VT[R{I|L}] 8.275;7.6703;7.3502;6.7455 +;-;-;- + 164 + 1 1.191 58921.5 1.0 8690 5539 14230 HBL1_DMSO_200M_050219_1,14231 HBL1_DMSO_200M_050219_1,14231,LPNAVITRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14232 70.74 4.6 15971000.0 25 0 4044300.0 + 12400 GTIGLIHAV 9 88 440.7661547264594 879.5177565197189 2 440.7663452029228 MULTI CID FTMS 0 0 0 14230 26019320.0 0.741526005785764 -2 0.1960220336914062 2 Unmodified _GTIGLIHAV_ ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF 59.79521254764295 0.0261954583213598 3 {[SA]|[TG]}{I|L}G{I|L}{I|L}H{[VA]|[{I|L}G]} 9 0 + 50.555 0.0 0.0 5.7481 5.7481 89.005 0.0 0.0 0.0 7.244237387763093 2.3764301679958777 2.3764301679958777 14.233937431123271 0 0.5994850021680094 1.5228787452803376 0.0 0.0 + + {[SA]|[TG]}{I|L}G{I|L}{I|L}H{[VA]|[{I|L}G]};[H{I|L}]AVA{I|L}T[VG];[H{I|L}]{I|L}GA{I|L}T[VG];[H{I|L}]AV{I|L}AT[VG];[H{I|L}]A{I|L}G{I|L}T[VG];[HA]{I|L}VA{I|L}T[VG];[H{I|L}]{I|L}G{I|L}AT[VG];[H{I|L}]{I|L}Q{I|L}T[VG];[H{I|L}]{I|L}AG{I|L}T[VG];[H{I|L}]A{I|L}VAT[VG] 5.7481;4.1297;3.7874;3.5872;3.335;3.2829;3.2449;3.0508;2.9927;2.7925 +;-;-;-;-;-;-;-;-;- + 382 + 1 1.191 61972.2 1.0 8691 5539 14230 HBL1_DMSO_200M_050219_1,14232 HBL1_DMSO_200M_050219_1,14232,GTIGLIHAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14233 70.741 5.5 12591000.0 25 0 2089700.0 + 9107 FFPDKPITQY 10 64 628.3215495725626 1254.6285462119251 2 628.3222534060478 MULTI CID FTMS 0 0 0 14230 15492870.0 0.4812161972525253 -2 0.1960220336914062 3 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 49.55428908609986 0.0827668555218455 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT{I|L}KQY 10 3 + 61.182 0.0 0.0 4.8765 4.8765 85.022 0.0 0.0 0.0 36.52880645020623 14.388793896675269 14.388793896675269 10.327307885713296 0 0.3807196863200844 0.0 0.7302046884880937 0.75 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT{I|L}KQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT{I|L}K[AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]T[AG]Y;[DP]KP{I|L}TQY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]T[AG]Y;[DP]PK{I|L}TQY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{[ET]|[MV]}[VP]KQY;[DP]KP{I|L}T[AG]Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 4.8765;4.0534;3.9517;3.8868;2.8336;2.8203;2.7318;2.4786;2.2292;2.0898 -;+;-;-;-;-;-;-;-;- + 418 + 1 1.191 57692.5 1.0 8692 5539 14230 HBL1_DMSO_200M_050219_1,14233 HBL1_DMSO_200M_050219_1,14233,FFPDKPITQY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14234 70.742 12.0 5392100.0 25 0 676910.0 + 6079 DSQILPKI 8 83 457.2712833509268 912.5280137686536 2 457.2716247439384 MULTI CID FTMS 0 0 0 14230 8122469.0 0.6954197243276342 -2 0.1960220336914062 4 Unmodified _DSQILPKI_ ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF 46.020951573049366 0.1579632664462935 3 [AG]SD{I|L} 5 7 35.638 0.0 0.0 3.9054 0.0 0.0 0.0 466.3031712726937 466.3031712726937 18.47080780490255 0.0 0.0 0.0 0 1.0 2.0 1.045114016114533 0.0 [AG]SD{I|L} 3.9054 - 90 1 1.191 55783.3 1.0 8693 5539 14230 HBL1_DMSO_200M_050219_1,14234 HBL1_DMSO_200M_050219_1,14234,DSQILPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14235 70.743 33.0 1512800.0 25 0 143580.0 + 10796 FYQPKIQQF 9 72 599.8165959556619 1197.6186389781235 2 599.8171874880791 MULTI CID FTMS 0 0 0 14230 2750569.5 1.0 0 0.0 5 Unmodified _FYQPKIQQF_ ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI 42.09456458481378 0.0639583784996157 3 [KP][Q{I|L}]QQ{M(Oxidation (M))|F}Y{M(Oxidation (M))|F} 9 6 + 33.292 0.0 0.0 2.7799 2.7799 77.565 0.0 0.0 0.0 6.133768371847317 13.427412123096268 6.133768371847317 9.03089986991944 0 0.242992819099939 0.0 0.0 1.25 [KP][Q{I|L}]QQ{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[Q{I|L}][KP]QQ{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[KP][Q{I|L}][AG]Q{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[KP][Q{I|L}]Q[AG]{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[KP][Q{I|L}]Q[Y{M(Oxidation (M))|F}]Q{M(Oxidation (M))|F};[Q{I|L}][KP][AG]Q{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[Q{I|L}][KP]Q[AG]{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[Q{I|L}][KP]Q[Y{M(Oxidation (M))|F}]Q{M(Oxidation (M))|F} 2.7799;2.0258;2.011;2.011;1.449;1.2569;1.2569;0.69498 -;-;-;-;-;-;-;- 276 1 1.191 41951.9 1.0 8694 5539 14230 HBL1_DMSO_200M_050219_1,14235 HBL1_DMSO_200M_050219_1,14235,FYQPKIQQF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14236 70.747 181.0 925370.0 25 0 118140.0 + 3560 CYWRPFYFRIR 11 76 803.9088813641923 1605.8032097951846 2 803.9095336794853 MULTI CID FTMS 0 0 0 14230 1726934.5 0.7279839727849289 -2 0.1960220336914062 6 Unmodified _CYWRPFYFRIR_ REV__ENSG00000096968|ENST00000381652|JAK2 1.1933415558491238 0.8695176722560516 3 {I|L}PNAV{I|L}T[R{I|L}] 9 -1 49.372 0.0 0.0 3.0746 0.0 0.0 610.1890688349126 0.0 610.1890688349126 0.0 12.003435819718732 0.0 0.0 0 0.0 0.0 0.0 1.174742501084005 {I|L}PNAV{I|L}T[R{I|L}] 3.0746 - 284 + 1 1.191 116825.9 1.0 8695 5539 14230 HBL1_DMSO_200M_050219_1,14236 HBL1_DMSO_200M_050219_1,14236,CYWRPFYFRIR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14237 70.748 66.0 1331000.0 25 0 164170.0 + 36505 TAEVALANL 9 107 451.25299001225534 900.4914270913107 2 451.2530090212822 MULTI CID FTMS 0 0 0 14230 1568394.25 1.0 0 0.0 7 Unmodified _TAEVALANL_ ENSG00000151746|ENST00000652176|BICD1;ENSG00000185963|ENST00000356884|BICD2;nc|ENSG00000151746|Q96G01-3|BICD1;nc|ENSG00000151746|Q96G01-4|BICD1;nc|ENSG00000185963|Q8TD16|BICD2 42.09456458481378 0.0639583784996157 3 [{I|L}A]DAT{I|L} 6 6 49.258 0.0 0.0 5.4701 0.0 0.0 0.0 313.1492389411732 313.1492389411732 24.02279122947392 0.0 0.0 0.0 0 0.0 2.0 0.9247425010840048 0.0 [{I|L}A]DAT{I|L} 5.4701 - 607 1 1.191 71995.2 1.0 8696 5539 14230 HBL1_DMSO_200M_050219_1,14237 HBL1_DMSO_200M_050219_1,14237,TAEVALANL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14238 70.749 44.0 2392800.0 25 0 190990.0 + 2217 AQCPIVERL 9 115 514.7815363676435 1027.548519802087 2 514.7817870974541 MULTI CID FTMS 0 0 0 14230 1540095.625 0.7800777104165375 -2 0.1960220336914062 8 Unmodified _AQCPIVERL_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF 57.72198328787511 0.0273433238377839 3 [QA]CP{I|L}VER{I|L} 9 0 + 66.177 0.0 0.0 6.4402 6.4402 82.459 0.0 0.0 0.0 42.72393373506912 15.15926704826019 15.15926704826019 3.01029995663982 0 1.0 0.8239087409443188 0.0 0.6747425010840047 + + [QA]CP{I|L}VER{I|L};[QA]C{I|L}PVER{I|L};[QA]CP{I|L}{I|L}DR{I|L};[QA]C{I|L}P{I|L}DR{I|L};[QA]{I|L}CPVER{I|L};[QA]{I|L}CP{I|L}DR{I|L};[QA]CP{I|L}[RD]{I|L}{I|L};[QA]C{I|L}P[RD]{I|L}{I|L};[QA]{I|L}CP[RD]{I|L}{I|L};[QA]C{I|L}R[DP]{I|L}{I|L} 6.4402;6.1473;5.76;5.467;5.3913;4.7111;4.4809;4.1879;3.4319;3.4306 +;-;-;-;-;-;-;-;-;- + 1147 + 1 1.191 83922.9 1.0 8697 5539 14230 HBL1_DMSO_200M_050219_1,14238 HBL1_DMSO_200M_050219_1,14238,AQCPIVERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14239 70.751 64.0 1285900.0 25 0 234030.0 + 44326 YLPNKLLTQ 9 108 545.3163856108691 1088.6182182885382 2 545.3168823122978 MULTI CID FTMS 0 0 0 14230 1354667.875 0.2973708550772772 -8 0.7378997802734375 9 Unmodified _YLPNKLLTQ_ REV__ENSG00000150712|ENST00000382142|MTMR12 4.75600775471527 0.7486543447549536 3 V 1 -1 10.485 0.0 0.0 0.96311 0.0 0.0 971.5385730632436 0.0 971.5385730632436 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.96311 - 51 + 1 1.191 74140.8 1.0 8698 5539 14230 HBL1_DMSO_200M_050219_1,14239 HBL1_DMSO_200M_050219_1,14239,YLPNKLLTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14240 70.752 56.0 1455600.0 25 0 172070.0 + + 11051 KIIQDIETI 9 123 536.8161070039541 1071.6176610747082 2 536.8166992068291 MULTI CID FTMS 0 0 0 14230 1276376.375 1.0 0 0.0 10 Unmodified _GDIALKLETL_ nc|ENSG00000072803|Q9UKB1-2|FBXW11;ENSG00000166167|ENST00000370187|BTRC;ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000166167|Q9Y297-2|BTRC 75.76082778847304 0.0187510588500744 3 {[QN]|[E{I|L}]|[KN]}N{I|L}K{I|L}ET{I|L} 9 -1 + 101.39 0.0 0.0 9.4615 9.4615 94.752 0.0 0.0 0.0 10.413926851582248 16.478174818886373 10.413926851582248 9.208187539523747 0 0.9247425010840048 1.6989700043360187 1.200061205686631 1.1549471895720984 {[QN]|[E{I|L}]|[KN]}N{I|L}K{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}GG{I|L}K{I|L}ET{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}K{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}QVK{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}N{I|L}K{I|L}TE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]{I|L}K{I|L}ET{I|L};[Q{I|L}]D{I|L}K{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}[AG]VK{I|L}ET{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}K{I|L}ET{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}K{I|L}ET{I|L} 9.4615;8.6022;8.4897;8.3951;7.9385;7.6304;7.5952;7.5359;7.2897;7.1852 -;-;-;-;-;-;-;-;-;- 1537 1 1.191 70534.7 1.0 8699 5539 14230 HBL1_DMSO_200M_050219_1,14240 HBL1_DMSO_200M_050219_1,14240,GDIALKLETL False False KIIQDIETI 70.752472 536.816699206829 13567827.0 14230.0 nc|ENSG00000072803|Q9UKB1-2|FBXW11;;ENSG00000166167|ENST00000370187|BTRC;;ENSG00000072803|ENST00000517395|FBXW11;;nc|ENSG00000072803|Q9UKB1|FBXW11;;nc|ENSG00000072803|Q9UKB1-3|FBXW11;;nc|ENSG00000166167|Q9Y297-2|BTRC 2.486175855000814 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14241 70.755 131.0 960540.0 25 0 111010.0 + 39154 TYNTQVNFM 9 126 559.2528860906724 1116.4912192481447 2 559.2533447146416 MULTI CID FTMS 0 0 0 14230 1108515.5 0.2105091096852016 -2 0.1960220336914062 11 Unmodified _TYNTQVNFM_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7684558-7685401:-|nuORF 107.1870275148908 0.0071859432680538 3 [YT]NTQVN{M(Oxidation (M))|F}M 9 0 + 84.522 0.0 0.0 7.5703 7.5703 92.31 0.0 0.0 0.0 12.969997779545992 6.835295873671754 6.835295873671754 9.208187539523747 0 1.4322333069283657 2.0 1.8539171939081167 0.8807196863200843 + + [YT]NTQVN{M(Oxidation (M))|F}M;[YT]NT[AG]VN{M(Oxidation (M))|F}M;[YT]GGTQVN{M(Oxidation (M))|F}M;[YT]NTQVGG{M(Oxidation (M))|F}M;[YT]NQTVN{M(Oxidation (M))|F}M;{[QS]|[NT]}YTQVN{M(Oxidation (M))|F}M;[YT]GGTQVGG{M(Oxidation (M))|F}M;[YT]NT[AG]VGG{M(Oxidation (M))|F}M;[YT]NTQNV{M(Oxidation (M))|F}M;[AG]SYTQVN{M(Oxidation (M))|F}M 7.5703;6.7456;6.7456;6.7456;6.5004;6.4087;5.9248;5.9248;5.8933;5.8784 +;-;-;-;-;-;-;-;-;- + 5967 1 1.191 98520.3 1.0 8700 5539 14230 HBL1_DMSO_200M_050219_1,14241 HBL1_DMSO_200M_050219_1,14241,TYNTQVNFM True True TYNTQVNFM 70.755151 559.253344714642 110150328.0 14230.0 ENST00000595288.5_1_19:7684558-7685401:-|nuORF;;ENSG00000076924|ENST00000358368|XAB2 8.362363815307617 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14242 70.76 265.0 669380.0 25 0 35930.0 15146 INVPRALVDI 10 190 555.3360935502353 1108.6576341672703 2 555.3361694216728 MULTI CID FTMS 0 0 0 14230 962680.75 0.7875810135757564 -2 0.1960220336914062 12 Unmodified _INVPRALVDI_ ENSG00000187902|ENST00000376325|SHISA7 19.256988751693697 0.5244284437930726 3 {[QV]|[N{I|L}]|[RA]|[KV]}V{[TV]|[{I|L}S]}AWV 8 5 33.017 0.0 0.0 2.9781 0.0 0.0 0.0 223.1262953909768 223.1262953909768 20.542651856219926 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.2887254899964357 0.6307196863200843 {[QV]|[N{I|L}]|[RA]|[KV]}V{[TV]|[{I|L}S]}AWV 2.9781 - 2223 1 1.191 136675.3 1.0 8701 5539 14230 HBL1_DMSO_200M_050219_1,14242 HBL1_DMSO_200M_050219_1,14242,INVPRALVDI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14243 70.762 70.0 1277300.0 25 0 84171.0 + 6447 EAFDRSFEV 9 137 550.2562991654612 1098.4980453977223 2 550.2559081912041 MULTI CID FTMS 0 0 0 14230 887774.625 0.6232111913059624 2 -0.1793060302734375 13 Unmodified _EAFDRSFEV_ ENSG00000169738|ENST00000306869|DCXR;ENST00000578885.5_1_17:79994327-79995552:-|nuORF;ENST00000580750.5_1_17:79994503-79995558:-|nuORF;ENST00000582074.5_1_17:79994229-79994802:-|nuORF 38.17557092003332 0.0854718145212029 3 EA{M(Oxidation (M))|F}[MT][HQ]HV 9 5 + 45.471 0.0 0.0 4.1394 4.1394 74.588 0.0 0.0 0.0 6.095507971723229 10.417112166456448 6.095507971723229 3.0102999566398125 0 0.6139829889124311 1.3010299956639813 0.0 0.0 EA{M(Oxidation (M))|F}[MT][HQ]HV;EA[HN]Q[HQ]HV;EA[HN]{[ET]|[MV]}YHV;EA[C(Carbamidomethyl (C))K]R{[CP]|[EA]}HV;EA[TA]H[TA]YHV;EA[KT][HD]YHV;{[QV]|[N{I|L}]|[RA]|[KV]}[YE]D{M(Oxidation (M))|F}AEV;{[QV]|[N{I|L}]|[RA]|[KV]}[YE][MT]TEV;{[QV]|[N{I|L}]|[RA]|[KV]}[YE][WE]{M(Oxidation (M))|F}V;EY{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}YHV 4.1394;3.8654;3.8654;3.5913;3.4776;3.431;3.2912;3.2751;2.733;2.7133 -;-;-;-;-;-;-;-;-;- 2050 + 1 1.191 73709.1 1.0 8702 5539 14230 HBL1_DMSO_200M_050219_1,14243 HBL1_DMSO_200M_050219_1,14243,EAFDRSFEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14244 70.764 103.0 1241100.0 25 0 101080.0 + 41431 VPLGVISRV 9 126 470.3021075868288 938.5896622404576 2 470.3026000857353 MULTI CID FTMS 0 0 0 14230 831462.5 1.0 0 0.0 14 Unmodified _VPLGVISRV_ ENSG00000063601|ENST00000445323|MTMR1;nc|ENSG00000063601|Q13613-2|MTMR1;nc|ENSG00000063601|Q13613|MTMR1 36.506200033944 0.094635877243972 3 VP{I|L}GV[DV]K{I|L} 9 4 + 65.978 0.0 0.0 7.0295 7.0295 87.065 0.0 0.0 0.0 38.00644077838903 4.973024840566467 4.973024840566467 5.514159134890591 0 1.0114393726401687 1.3010299956639813 0.0 0.0 VP{I|L}GV[DV]K{I|L};VP{I|L}R[DV]K{I|L};VP{I|L}VG[DV]K{I|L};VPVAV[DV]K{I|L};VP{I|L}G[{I|L}A]EK{I|L};VPV{I|L}G[DV]K{I|L};VP{I|L}V[RD]K{I|L};VP{I|L}[Q{I|L}]EK{I|L};VP{I|L}VAAEK{I|L};VPVA[{I|L}A]EK{I|L} 7.0295;6.442;6.3875;6.3866;5.92;5.7446;5.6973;5.3325;5.278;5.2771 -;-;-;-;-;-;-;-;-;- 1154 + 1 1.191 102953.0 1.0 8703 5539 14230 HBL1_DMSO_200M_050219_1,14244 HBL1_DMSO_200M_050219_1,14244,VPLGVISRV True True VPLGVISRV 70.763922 470.302600085735 6983889.0 14230.0 ENSG00000063601|ENST00000445323|MTMR1;;nc|ENSG00000063601|Q13613-2|MTMR1;;nc|ENSG00000063601|Q13613|MTMR1 5.5599649747212725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14245 70.767 179.0 765320.0 25 0 206390.0 -1 0 77 933.4162125610932 1864.817872188986 2 933.9183837771416 MULTI CID FTMS 0 0 0 14230 711817.625 0.4164510928901205 -2 0.1960220336914062 15 3 PDK[{I|L}P]TQY 8 -1 18.58 0.0 0.0 0.99635 0.0 0.0 904.3239589615938 0.0 904.3239589615938 0.0 12.136605671143748 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 PDK[{I|L}P]TQY 0.99635 - 425 + 1 1.191 99001.0 1.0 8704 5539 14230 HBL1_DMSO_200M_050219_1,14245 HBL1_DMSO_200M_050219_1,14245, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14246 70.77 97.0 1148800.0 25 0 111650.0 + 25322 NAIEKVFKV 9 140 349.878438302729 1046.6134855083872 3 349.8777953982353 MULTI CID FTMS 0 0 0 14230 635314.1875 1.0 0 0.0 16 Unmodified _NAIEKVFKV_ ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-2|GLUD1;nc|ENSG00000148672|P00367-3|GLUD1 41.8396318013385 0.0653578398400075 3 {[QG]|[NA]}{I|L}EKV{M(Oxidation (M))|F}KV 9 0 + 61.648 0.0 0.0 5.8902 5.8902 81.617 0.0 0.0 0.0 22.37643016799588 3.735806628125928 3.735806628125928 3.735806628125928 0 0.25 1.5228787452803376 0.5 0.25 + + {[QG]|[NA]}{I|L}EKV{M(Oxidation (M))|F}KV;{[QG]|[NA]}{I|L}EKV{M(Oxidation (M))|F}VK;{[{M(Oxidation (M))|F}H]|[RQ]}[RD]V{M(Oxidation (M))|F}KV;{[{M(Oxidation (M))|F}H]|[RQ]}[RD]V{M(Oxidation (M))|F}VK;{[QG]|[NA]}V[RH][RV]PV;{[QG]|[NA]}V[RH][Q{I|L}][{I|L}P] 5.8902;5.5333;1.308;0.95109;0.78304;0.12612 +;-;-;-;-;- + 282 + 1 1.191 92189.0 1.0 8705 5539 14230 HBL1_DMSO_200M_050219_1,14246 HBL1_DMSO_200M_050219_1,14246,NAIEKVFKV True True NAIEKVFKV 70.769516 349.877795398235 5825395.5 14230.0 ENSG00000182890|ENST00000328078|GLUD2;;ENSG00000148672|ENST00000277865|GLUD1;;nc|ENSG00000148672|P00367-3|GLUD1;;nc|ENSG00000148672|P00367-2|GLUD1 4.784409046173096 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14247 70.776 352.0 743600.0 25 0 45830.0 + -1 NKMRMKAEPPM 11 160 674.8292185657306 1347.643884198261 2 674.8287841677666 MULTI CID FTMS 0 0 0 14230 624778.625 0.2222251121723008 -2 0.1960220336914062 17 Oxidation (M) _NKM(Oxidation (M))RMKAEPPM_ REV__ENSG00000081154|ENST00000265260|PCNP;REV__nc|ENSG00000081154|Q8WW12-3|PCNP 26.268140514670165 0.4754186812857754 3 {[QS]|[NT]}EQAERS{I|L}{I|L}GM 12 -1 + 104.77 0.0 0.0 7.7744 7.7744 83.844 0.0 0.0 0.0 1.8096184615373403 16.611814434466183 1.8096184615373403 1.8096184615373403 0 3.0356668758921828 0.6989700043360187 2.399649864804614 0.0 {[QS]|[NT]}EQAERS{I|L}{I|L}GM;{[QD]|[EN]|[WG]|[KD]|[RS]}TQAERS{I|L}{I|L}GM;{[SA]|[TG]}GEQAERS{I|L}{I|L}GM;{[SA]|[TG]}ADQAERS{I|L}{I|L}GM;{[ES]|[DT]|[{I|L}C]}QQAERS{I|L}{I|L}GM;[QT]DQAERS{I|L}{I|L}GM;{[QS]|[NT]}E[AG]AERS{I|L}{I|L}GM;{[QS]|[NT]}EQAE[VG]S{I|L}{I|L}GM;{[QS]|[NT]}QEAERS{I|L}{I|L}GM;{[QD]|[EN]|[WG]|[KD]|[RS]}T[AG]AERS{I|L}{I|L}GM 7.7744;7.6401;7.3945;7.3305;7.2397;7.1917;7.0992;7.0992;7.0451;6.965 -;-;-;-;-;-;-;-;-;- 19777 1 1.191 193861.2 1.0 8706 5539 14230 HBL1_DMSO_200M_050219_1,14247 HBL1_DMSO_200M_050219_1,14247,NKMRMKAEPPM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14248 70.782 355.0 502630.0 25 0 62800.0 + 14893 ILLENFSAEK 10 139 582.3190139560247 1162.6234749788491 2 582.3201171755791 MULTI CID FTMS 0 0 0 14230 628649.6875 0.5146492233798959 2 -0.1793060302734375 18 Unmodified _ILLENFSAEK_ ENST00000560979.1_1_15:49715501-49715549:+|nuORF 57.10758569107544 0.0441734977746303 3 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SNT{I|L} 10 3 + 118.82 0.0 0.0 10.22 10.22 94.567 0.0 0.0 0.0 79.95159789708981 13.521825181113629 13.521825181113629 9.164539485499262 0 1.8882104921644447 2.0 1.4802046884880935 0.3807196863200844 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SNT{I|L};{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SGGT{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SNT{I|L};{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SA[SG]{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SGGT{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SA{[SA]|[TG]}V;{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SA[SG]{I|L};{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}S[QT]V 10.22;9.4313;9.4313;8.6841;8.6758;8.3187;7.8958;7.5836;7.5632;7.5388 -;-;-;+;-;-;-;-;-;- + 1612 + 1 1.191 136621.8 1.0 8707 5539 14230 HBL1_DMSO_200M_050219_1,14248 HBL1_DMSO_200M_050219_1,14248,ILLENFSAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14249 70.786 211.0 345850.0 25 0 23576.0 + + 5206 VTLDVQIQHV 10 120 575.8433071051038 1149.6720612770075 2 575.8436157107353 MULTI CID FTMS 0 0 0 14230 573681.4375 0.6790768866093116 -2 0.1960220336914062 19 Unmodified _DITVQLLLHV_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B 10.823927491677226 0.6659270209832991 3 {[TV]|[{I|L}S]}[W{I|L}]Y{I|L}EE 8 -1 33.097 0.0 0.0 2.8788 0.0 0.0 0.0 113.14762215030753 113.14762215030753 4.483842625304959 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.2742275032520141 0.0 {[TV]|[{I|L}S]}[W{I|L}]Y{I|L}EE 2.8788 - 319 1 1.191 62598.8 1.0 8708 5539 14230 HBL1_DMSO_200M_050219_1,14249 HBL1_DMSO_200M_050219_1,14249,DITVQLLLHV False False VTLDVQIQHV 70.786303 575.843615710735 4661440.5 14230.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 4.884430885314941 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14250 70.788 63.0 1015900.0 25 0 55550.0 + 44540 YPESLVRVV 9 89 531.3037503742631 1060.5929478153262 2 531.3069946169853 MULTI CID FTMS 0 0 0 14230 633926.5625 0.342941136652922 -2 0.1960220336914062 20 Unmodified _YPESLVRVV_ ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6 27.628801355627647 0.1796483985696185 3 YPES{I|L}VRVV 9 0 + 64.312 0.0 0.0 6.0638 6.0638 92.384 0.0 0.0 0.0 41.01132862776844 2.140012553530965 2.140012553530965 64.31208471258024 0 0.3807196863200844 1.5228787452803376 0.3494850021680094 0.0 + + YPES{I|L}VRVV 6.0638 + + 304 + 1 1.191 57757.7 1.0 8709 5539 14230 HBL1_DMSO_200M_050219_1,14250 HBL1_DMSO_200M_050219_1,14250,YPESLVRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14252 70.795 286.0 391720.0 25 0 26672.0 + 18328 KVLEPSETLVV 11 127 607.3561250359503 1212.6976971387005 2 607.3561889529228 MULTI CID FTMS 0 0 0 14251 425303.15625 0.5021163506990455 1 -0.1256790161132812 1 Unmodified _KVLEPSETLVV_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON 35.61225514009592 0.279986979807413 3 {[QN]|[E{I|L}]|[KN]}[DG]{I|L}VRT{I|L}VV 11 6 + 73.639 0.0 0.0 6.0723 6.0723 82.11 0.0 0.0 0.0 3.729660980175311 16.575773191777927 3.729660980175311 3.729660980175311 0 0.8252574989159953 1.2218487496163564 1.6237125054200234 0.0 {[QN]|[E{I|L}]|[KN]}[DG]{I|L}VRT{I|L}VV;[PS]ET{I|L}VRT{I|L}VV;{[QN]|[E{I|L}]|[KN]}[DG]{I|L}VKE{I|L}VV;[{I|L}V]KEERE{I|L}VV;[{I|L}V]E{[DA]|[EG]}VRT{I|L}VV;[{I|L}V]EKERE{I|L}VV;[PS]ET{I|L}VKE{I|L}VV;{[QN]|[E{I|L}]|[KN]}V{[DA]|[EG]}VRT{I|L}VV;{[QN]|[E{I|L}]|[KN]}[DG]{I|L}V[VG]T{I|L}VV;{[QN]|[E{I|L}]|[KN]}VKERE{I|L}VV 6.0723;5.7647;5.6789;5.5915;5.4738;5.4463;5.3713;5.3286;5.3195;5.3011 -;-;-;-;-;-;-;-;-;- 2343 1 1.191 85428.5 1.0 8710 5540 14251 HBL1_DMSO_200M_050219_1,14252 HBL1_DMSO_200M_050219_1,14252,KVLEPSETLVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14253 70.797 65.0 1489500.0 25 0 130080.0 -1 0 105 630.1702326214144 629.1629561548143 1 630.1703369021416 MULTI CID FTMS 0 0 0 14251 1234063.125 1.0 0 0.0 2 3 Y 1 -1 15.485 0.0 0.0 2.4611 0.0 0.0 448.08858284114086 0.0 448.08858284114086 0.0 -0.6348625752110593 -0.6348625752110593 0.0 0 0.0 0.0 0.0 0.0 Y 2.4611 - 119 + 1 1.191 76606.0 1.0 8711 5540 14251 HBL1_DMSO_200M_050219_1,14253 HBL1_DMSO_200M_050219_1,14253, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14254 70.798 72.0 858830.0 25 0 142880.0 + -1 CDNDGDCH 8 53 935.2655334146416 934.2582569480415 1 935.2662841677666 MULTI CID FTMS 0 0 0 14251 932382.0625 1.0 0 0.0 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))DNDGDCH_ REV__ENSG00000134569|ENST00000378623|LRP4 2.577480529830294 0.808687252328423 3 W 1 -1 8.4949 0.0 0.0 0.90926 0.0 0.0 115.99923702792292 629.1493624322874 745.1485994602103 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 W 0.90926 - 4 + 1 1.191 47527.6 1.0 8712 5540 14251 HBL1_DMSO_200M_050219_1,14254 HBL1_DMSO_200M_050219_1,14254,CDNDGDCH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14255 70.8 53.0 3308600.0 25 0 317550.0 + 11481 GIIKAFRNI 9 125 344.55025671372493 1030.628940741375 3 344.5500976443291 MULTI CID FTMS 0 0 0 14251 885324.75 0.4786251305768601 -1 0.0536270141601562 4 Unmodified _GIIKAFRNI_ ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135660-185136437:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF 23.78978130925829 0.2284941198415988 3 {[VA]|[{I|L}G]}{I|L}KA{M(Oxidation (M))|F} 6 3 52.708 0.0 0.0 5.1142 0.0 0.0 0.0 398.2159823053344 398.2159823053344 39.21327198560853 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.4247425010840047 + {[VA]|[{I|L}G]}{I|L}KA{M(Oxidation (M))|F} 5.1142 + + 325 + 1 1.191 143767.7 1.0 8713 5540 14251 HBL1_DMSO_200M_050219_1,14255 HBL1_DMSO_200M_050219_1,14255,GIIKAFRNI False True GIIKAFRNI 70.799741 344.550097644329 11507297.0 14251.0 ENSG00000174444|ENST00000307961|RPL4;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;;ENST00000422486.1_1_3:185135660-185136437:-|nuORF 3.104551633199056 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14256 70.802 92.0 679320.0 25 0 70543.0 + -1 FLAACCCY 8 106 475.6819065690312 949.3492602048624 2 475.6817809939384 MULTI CID FTMS 0 0 0 14251 603063.8125 0.4838466087736859 -5 0.3908843994140625 5 Carbamidomethyl (C) _FLAAC(Carbamidomethyl (C))CCY_ REV__ENST00000515408.5_1_5:112351033-112351294:+|nuORF 6.354104778181461 0.7857632046190106 3 {[VA]|[{I|L}G]}P{[RE]|[WV]}{I|L}{I|L} 7 -1 25.45 0.0 0.0 2.6808 0.0 0.0 0.0 167.85399588285 167.85399588285 9.763582385535086 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}P{[RE]|[WV]}{I|L}{I|L} 2.6808 - 173 1 1.191 56626.6 1.0 8714 5540 14251 HBL1_DMSO_200M_050219_1,14256 HBL1_DMSO_200M_050219_1,14256,FLAACCCY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14257 70.809 425.0 502640.0 25 0 19695.0 -1 MYFWKRFCFWK 11 153 857.9016964683636 1713.7888400035272 2 858.4052612185478 MULTI CID FTMS 0 0 0 14251 442975.0 0.3248773367575723 -1 0.0536270141601562 6 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 3 [MN]PN{I|L}NADYE[RH]{I|L}Q 14 -1 + 110.96 0.0 0.0 6.4747 6.4747 84.185 0.0 0.0 0.0 56.751092607575856 1.1480289235345251 1.1480289235345251 4.394651314730496 0 1.329689690656103 1.5228787452803376 0.6421590589602533 1.916386562212267 [MN]PN{I|L}NADYE[RH]{I|L}Q;[MN]PN{I|L}NADQAA[WE]{I|L}Q;[MN]PN{I|L}GGADYE[RH]{I|L}Q;[MN]PGG{I|L}NADYE[RH]{I|L}Q;[MN]PN{I|L}NAD[RN][WE]{I|L}Q;[MN]PN{I|L}NWQAA[WE]{I|L}Q;[MN]PN{I|L}NADY[DG][H{I|L}]{I|L}Q;[MN]{I|L}[NP]NADYE[RH]{I|L}Q;[NP]{I|L}NATAYDAN{I|L}[DV][HS];[NP]{I|L}NATAYDAN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.4747;6.2183;5.9466;5.9466;5.6754;5.6058;5.4926;5.0557;5.0253;5.0111 -;-;-;-;-;-;-;-;-;- 19331 + 1 1.191 140088.8 1.0 8715 5540 14251 HBL1_DMSO_200M_050219_1,14257 HBL1_DMSO_200M_050219_1,14257,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14258 70.817 446.0 308620.0 25 0 82267.0 + -1 TEMYNCYEQCF 11 88 780.7785437646635 0 780.7773925662041 PEAK CID FTMS 0 0 0 14251 375441.4375 1.0 0 0.0 7 2 Carbamidomethyl (C),Oxidation (M) _TEM(Oxidation (M))YNC(Carbamidomethyl (C))YEQC(Carbamidomethyl (C))F_ REV__nc|ENSG00000178287|Q08648-3|SPAG11B 1.0714618166137932 0.4761840153648598 3 {M(Oxidation (M))|F}S 2 -1 16.766 0.0 0.0 1.0751 0.0 0.0 610.1917164932669 712.2255032252916 1322.4172197185585 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 {M(Oxidation (M))|F}S 1.0751 - 22 + 1 1.191 100187.8 1.0 8716 5540 14251 HBL1_DMSO_200M_050219_1,14258 HBL1_DMSO_200M_050219_1,14258,TEMYNCYEQCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14259 70.827 539.0 479260.0 25 0 120090.0 -1 0 70 1144.8080559618163 3431.402338485649 3 1145.139575183392 MULTI CID FTMS 0 0 0 14251 388066.71875 0.0176697062784334 -4 0.3291397094726562 8 3 E 1 -1 10.797 0.0 0.0 0.31465 0.0 0.0 2775.173182683965 524.1625851267536 3299.3357678107186 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 E 0.31465 - 54 + 1 1.191 208493.6 1.0 8717 5540 14251 HBL1_DMSO_200M_050219_1,14259 HBL1_DMSO_200M_050219_1,14259, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14260 70.835 447.0 180700.0 25 0 18013.0 + -1 KFCNCNYWNLM 11 88 775.321009185163 1548.627465437126 2 775.8226196169853 MULTI CID FTMS 0 0 0 14251 379991.0 1.0 0 0.0 9 2 Carbamidomethyl (C) _KFC(Carbamidomethyl (C))NC(Carbamidomethyl (C))NYWNLM_ REV__ENST00000432292.7_1_2:190656656-190682770:+|nuORF 1.3295316138638542 0.8688751186870782 3 VS{I|L}N{I|L}[DP] 7 -1 31.431 0.0 0.0 2.0296 0.0 0.0 792.220923544351 0.0 792.220923544351 0.0 20.63023042498984 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 VS{I|L}N{I|L}[DP] 2.0296 - 433 + 1 1.191 60462.4 1.0 8718 5540 14251 HBL1_DMSO_200M_050219_1,14260 HBL1_DMSO_200M_050219_1,14260,KFCNCNYWNLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14261 70.836 42.0 1656600.0 25 0 237450.0 + 25954 NLPDEIYHV 9 97 550.2740614993681 1098.5335700655362 2 550.2731811404228 MULTI CID FTMS 0 0 0 14251 365764.3125 0.0379904391959159 -2 0.1934814453125 10 Unmodified _NLPDEIYHV_ ENSG00000148335|ENST00000372483|NTMT1 44.40701690623563 0.0526327925666318 3 {[QV]|[N{I|L}]|[RA]|[KV]}PD{[QN]|[E{I|L}]|[KN]}YHV 9 0 + 62.342 0.0 0.0 5.675 5.675 88.236 0.0 0.0 0.0 9.768762011528622 11.706962271689749 9.768762011528622 12.21848749616356 0 0.3494850021680094 2.0 0.6505149978319906 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PD{[QN]|[E{I|L}]|[KN]}YHV;{[QV]|[N{I|L}]|[RA]|[KV]}PD{[QN]|[E{I|L}]|[KN]}V{[WN]|[YH]};{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}R{[CP]|[EA]}HV;[DP]E{I|L}YHVQV;[DP]EY{I|L}HVQV;{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}R{[MS]|[{M(Oxidation (M))|F}A]}{[MS]|[{M(Oxidation (M))|F}A]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}YHVQV;[DP]E{I|L}R{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]};[DP]E{I|L}R{[QD]|[EN]|[WG]|[KD]|[RS]}QV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PY{I|L}HVQV 5.675;4.5627;3.124;2.6597;2.2975;1.6911;1.5851;1.448;1.2269;1.2229 +;-;-;-;-;-;-;-;-;- + 472 + 1 1.191 59472.5 1.0 8719 5540 14251 HBL1_DMSO_200M_050219_1,14261 HBL1_DMSO_200M_050219_1,14261,NLPDEIYHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14262 70.845 523.0 333360.0 25 0 37627.0 + 24087 LYHFSSSEL 9 185 541.7614183199368 1081.5082837066734 2 541.7610961794853 MULTI CID FTMS 0 0 0 14251 287020.78125 0.2137892907141348 4 -0.3310012817382812 11 Unmodified _LYHFSSSEL_ ENSG00000105173|ENST00000262643|CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1 63.562846038646086 0.0241094678104353 3 [Y{I|L}]H{M(Oxidation (M))|F}SSSE{I|L} 9 0 + 57.093 0.0 0.0 5.279 5.279 80.99 0.0 0.0 0.0 4.948500216800937 14.973024840566469 4.948500216800937 4.948500216800937 0 0.4247425010840047 1.154901959985743 1.3494850021680094 0.0 + + [Y{I|L}]H{M(Oxidation (M))|F}SSSE{I|L};[{I|L}P]SC(Carbamidomethyl (C)){[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}W{M(Oxidation (M))|F}SSSE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}Y{I|L}SSSE{I|L};[AG]VW{M(Oxidation (M))|F}SSSE{I|L};[{I|L}P]S[CG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}PC(Carbamidomethyl (C)){[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}DH[YT]S{M(Oxidation (M))|F}{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}[KC]SSSE{I|L};{NN|[MP]|[D{I|L}]|[EV]}SH[YT]S{M(Oxidation (M))|F}{I|L} 5.279;4.8215;4.7037;4.3267;4.2777;3.9701;3.9592;3.8083;3.303;3.2428 +;-;-;-;-;-;-;-;-;- + 2573 1 1.191 134074.8 1.0 8720 5540 14251 HBL1_DMSO_200M_050219_1,14262 HBL1_DMSO_200M_050219_1,14262,LYHFSSSEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14263 70.855 497.0 553510.0 25 0 108860.0 + -1 EIPICNWQQFR 11 138 745.8615847550511 1489.7086165769022 2 745.8621703982353 MULTI CID FTMS 0 0 0 14251 296815.3125 0.4198337707407543 -1 0.0536270141601562 12 Carbamidomethyl (C) _EIPIC(Carbamidomethyl (C))NWQQFR_ REV__ENST00000368895.2_1_10:124641150-124648192:+|nuORF 2.9952420565917617 0.861016188266951 3 [{I|L}T]N{I|L}{I|L}HAV 8 -1 42.463 0.0 0.0 2.8504 0.0 0.0 0.0 625.1767945832812 625.1767945832812 31.52858488269321 0.0 0.0 0.0 0 0.0 0.744727494896694 1.829689690656103 0.3054621874040891 [{I|L}T]N{I|L}{I|L}HAV 2.8504 - 2544 1 1.191 197174.1 1.0 8721 5540 14251 HBL1_DMSO_200M_050219_1,14263 HBL1_DMSO_200M_050219_1,14263,EIPICNWQQFR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14264 70.858 136.0 1007700.0 25 0 136880.0 + 15339 PDKPITQY 8 130 480.79800899102304 959.581465048846 2 480.7975036501884 MULTI CID FTMS 0 0 0 14251 272057.75 0.6000957302436434 1 -0.1256790161132812 13 Unmodified _IPLSIVRY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656-2|DDOST 15.847184025352805 0.6768015514314958 3 {I|L}P{I|L}NR 5 4 54.68 0.0 0.0 5.6984 0.0 0.0 0.0 363.20273767642817 363.20273767642817 30.717881473224857 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P{I|L}NR 5.6984 - 1507 + 1 1.191 107217.4 1.0 8722 5540 14251 HBL1_DMSO_200M_050219_1,14264 HBL1_DMSO_200M_050219_1,14264,IPLSIVRY False False PDKPITQY 70.857907 480.797503650188 1334121.625 14251.0 ENSG00000244038|ENST00000602624|DDOST;;nc|ENSG00000244038|P39656|DDOST;;nc|ENSG00000244038|P39656-3|DDOST;;nc|ENSG00000244038|P39656-2|DDOST 3.302592118581136 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14265 70.863 248.0 456750.0 25 0 41632.0 + 36529 TAHLVSMI 8 129 436.2386505363809 870.4627481395618 2 436.2387878298759 MULTI CID FTMS 0 0 0 14251 238143.875 0.7187185791852395 -1 0.0536270141601562 14 Unmodified _TAHLVSMI_ ENSG00000198382|ENST00000356136|UVRAG 23.1484247019978 0.5573009939494978 3 [YV]SV{I|L} 5 5 24.579 0.0 0.0 2.8237 0.0 0.0 0.0 306.12164543965093 306.12164543965093 0.1420134485329427 0.0 0.0 0.0 0 0.3054621874040891 0.585026652029182 0.4247425010840047 0.0 [YV]SV{I|L} 2.8237 - 179 + 1 1.191 94269.5 1.0 8723 5540 14251 HBL1_DMSO_200M_050219_1,14265 HBL1_DMSO_200M_050219_1,14265,TAHLVSMI False True TAHLVSMI 70.862518 436.238787829876 3936050.0 14251.0 ENSG00000198382|ENST00000356136|UVRAG 2.836291074752808 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14266 70.87 438.0 270550.0 25 0 23396.0 + 43679 YAVDAYFREA 10 124 602.7848327968098 1203.5551126604196 2 602.7860595583916 MULTI CID FTMS 0 0 0 14251 218901.25 1.0 0 0.0 15 Unmodified _YAVDAYFREA_ ENSG00000102038|ENST00000371121|SMARCA1;ENSG00000153147|ENST00000283131|SMARCA5;nc|ENSG00000102038|P28370-2|SMARCA1;nc|ENSG00000102038|P28370|SMARCA1 23.80106514851385 0.4339316747945569 3 YAVDAY{M(Oxidation (M))|F} 7 3 74.214 0.0 0.0 6.1662 0.0 0.0 0.0 371.1683443658813 371.1683443658813 62.67741607887703 0.0 0.0 0.0 0 0.8252574989159953 1.6989700043360187 0.0 0.0 + YAVDAY{M(Oxidation (M))|F} 6.1662 + + 1158 + 1 1.191 88183.1 1.0 8724 5540 14251 HBL1_DMSO_200M_050219_1,14266 HBL1_DMSO_200M_050219_1,14266,YAVDAYFREA False True YAVDAYFREA 70.87033 602.786059558392 2297008.5 14251.0 nc|ENSG00000102038|P28370|SMARCA1;;nc|ENSG00000102038|P28370-2|SMARCA1;;ENSG00000102038|ENST00000371121|SMARCA1;;ENSG00000153147|ENST00000283131|SMARCA5 7.700517972310384 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14267 70.875 269.0 223440.0 25 0 32774.0 + 43859 YFKPMMKEF 9 86 407.5329407627767 1219.5769928885302 3 407.8676330447197 MULTI CID FTMS 0 0 0 14251 218660.21875 0.6457109266388067 1 -0.1256790161132812 16 Unmodified _YFKPMMKEF_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 10.799506525563784 0.5443532743200366 3 {NN|[MP]|[D{I|L}]|[EV]}MK{M(Oxidation (M))|F}{M(Oxidation (M))|F} 6 4 16.643 0.0 0.0 1.3647 0.0 0.0 0.0 435.2047613224224 435.2047613224224 3.87899033331902 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}MK{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.3647 - 74 1 1.191 56779.3 1.0 8725 5540 14251 HBL1_DMSO_200M_050219_1,14267 HBL1_DMSO_200M_050219_1,14267,YFKPMMKEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14268 70.885 521.0 105970.0 25 0 22231.0 -1 0 55 1080.920336902142 0 1080.920336902142 PEAK CID FTMS 0 0 0 -1 0 17 3 V 1 -1 6.9897 0.0 0.0 0.32362 0.0 0.0 1221.3863839130752 836.3472655166316 2057.733649429707 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.32362 - 12 + 1 1.191 44029.6 1.0 8726 5540 14251 HBL1_DMSO_200M_050219_1,14268 HBL1_DMSO_200M_050219_1,14268, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14269 70.895 536.0 124900.0 25 0 27023.0 -1 0 50 1086.375048816204 0 1086.375048816204 PEAK CID FTMS 0 0 0 -1 0 18 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.322 0.0 0.0 1221.3841878952385 799.2587828101183 2020.642970705357 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.322 - 10 + 1 1.191 52848.5 1.0 8727 5540 14251 HBL1_DMSO_200M_050219_1,14269 HBL1_DMSO_200M_050219_1,14269, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14270 70.904 501.0 453990.0 25 0 100350.0 -1 0 79 1110.982714831829 0 1110.982714831829 PEAK CID FTMS 0 0 0 -1 0 19 3 AV{I|L} 3 -1 13.188 0.0 0.0 0.59405 0.0 0.0 1351.47578547713 582.2672213190061 1933.743006796136 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AV{I|L} 0.59405 - 61 + 1 1.191 145506.5 1.0 8728 5540 14251 HBL1_DMSO_200M_050219_1,14270 HBL1_DMSO_200M_050219_1,14270, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14271 70.914 546.0 211350.0 25 0 44487.0 -1 0 77 1150.1395224201185 3447.396737860555 3 1150.472705066204 MULTI CID FTMS 0 0 0 14251 127143.96875 0.3121340902299651 -1 0.0536270141601562 20 3 YG 2 -1 10.969 0.0 0.0 0.31819 0.0 0.0 1797.6205670615298 1426.6848010475398 3224.3053681090696 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.31819 - 44 + 1 1.191 93818.1 1.0 8729 5540 14251 HBL1_DMSO_200M_050219_1,14271 HBL1_DMSO_200M_050219_1,14271, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14273 70.918 9.2 3239500.0 25 0 409170.0 21621 LPLAAALAF 9 59 443.7734510303929 885.5323491275858 2 443.7733947634697 MULTI CID FTMS 0 0 0 14272 6500415.5 0.3803539441177575 25 -2.070884704589844 1 Unmodified _LPLAAALAF_ ENSG00000262655|ENST00000576479|SPON1 14.581692164780916 0.4419739649577144 3 {I|L}PY 3 7 47.619 0.0 0.0 5.3775 0.0 0.0 0.0 509.31116663150624 509.31116663150624 33.01538440272459 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PY 5.3775 - 25 + 1 1.164 32370.1 1.0 8730 5541 14272 HBL1_DMSO_200M_050219_1,14273 HBL1_DMSO_200M_050219_1,14273,LPLAAALAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14274 70.919 61.0 823680.0 25 0 236920.0 -1 0 36 1066.095663410906 3195.265160832919 3 1066.430834949017 MULTI CID FTMS 0 0 0 14272 3363913.0 0.2220421182019377 5 -0.33160400390625 2 3 GYW 3 -1 11.427 0.0 0.0 0.35761 0.0 0.0 1653.5828621042058 1132.5056856744752 2786.088547778681 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYW 0.35761 - 16 + 1 1.164 56157.7 1.0 8731 5541 14272 HBL1_DMSO_200M_050219_1,14274 HBL1_DMSO_200M_050219_1,14274, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14275 70.92 4.9 5633400.0 25 0 548780.0 + 17807 KQLDDLKVEL 10 64 600.8452342256743 1199.6759155181485 2 600.8456909060478 MULTI CID FTMS 0 0 0 14272 10075467.0 0.0299845613599192 -5 0.4548187255859375 3 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 10.799506525563784 0.666336781075408 3 {I|L}KV{[QN]|[E{I|L}]|[KN]} 5 5 22.218 0.0 0.0 1.852 0.0 0.0 599.2931996076187 0.0 599.2931996076187 0.0 10.6246936830415 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}KV{[QN]|[E{I|L}]|[KN]} 1.852 + + 29 1 1.164 23360.2 1.0 8732 5541 14272 HBL1_DMSO_200M_050219_1,14275 HBL1_DMSO_200M_050219_1,14275,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14276 70.922 6.5 7225600.0 25 0 549170.0 + 27407 PILDESEPEL 10 82 571.2863532668998 1140.5581536005996 2 571.2872802615166 MULTI CID FTMS 0 0 0 14272 6690268.5 0.698432244351695 -3 0.3191604614257812 4 Unmodified _PILDESEPEL_ REV__ENSG00000164309|ENST00000446378|CMYA5 37.97399986684836 0.1789611706409123 3 C(Carbamidomethyl (C))TPE{I|L} 5 -1 39.983 0.0 0.0 3.5055 0.0 0.0 522.2804432599625 0.0 522.2804432599625 0.0 6.721631021820507 0.0 0.0 0 1.3516784832448856 0.0 0.4247425010840047 0.0 C(Carbamidomethyl (C))TPE{I|L} 3.5055 - 155 1 1.164 41826.9 1.0 8733 5541 14272 HBL1_DMSO_200M_050219_1,14276 HBL1_DMSO_200M_050219_1,14276,PILDESEPEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14277 70.923 10.0 2630000.0 25 0 293660.0 + 17816 KQLDDLKVEL 10 63 400.8994160702367 1199.67641881091 3 400.8992187380791 MULTI CID FTMS 0 0 0 14272 4836927.0 0.0234041804745512 -3 0.3191604614257812 5 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 13.51866281300042 0.6207119795985845 3 {NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L} 6 5 23.874 0.0 0.0 1.99 0.0 0.0 0.0 484.2770416285355 484.2770416285355 10.379099962974152 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L} 1.99 - 50 1 1.164 25781.8 1.0 8734 5541 14272 HBL1_DMSO_200M_050219_1,14277 HBL1_DMSO_200M_050219_1,14277,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14278 70.924 9.3 2471700.0 25 0 134620.0 + 42990 VVVDPIQSV 9 55 478.2765603017722 954.5385676703444 2 478.2768127322197 MULTI CID FTMS 0 0 0 14272 4820108.5 1.0 0 0.0 6 Unmodified _VVVDPIQSV_ ENSG00000115233|ENST00000409682|PSMD14 16.942295170755138 0.3780752226737986 3 VV[DV]P 5 4 16.936 0.0 0.0 1.7742 0.0 0.0 0.0 442.229613162785 442.229613162785 4.461499616092652 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + VV[DV]P 1.7742 + + 13 1 1.164 24549.4 1.0 8735 5541 14272 HBL1_DMSO_200M_050219_1,14278 HBL1_DMSO_200M_050219_1,14278,VVVDPIQSV False True VVVDPIQSV 70.923988 478.27681273222 165983920.0 14272.0 ENSG00000115233|ENST00000409682|PSMD14 6.320130983988444 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14279 70.925 12.0 2921200.0 25 0 258240.0 + 23695 LTTEQIEETL 10 56 588.8038598587466 1175.593166784293 2 588.8035156130791 MULTI CID FTMS 0 0 0 14272 4732563.5 1.0 0 0.0 7 Unmodified _LTTEQIEETL_ ENSG00000182606|ENST00000327628|TRAK1 55.50274090549119 0.048383292844968 3 [{I|L}T]E[QT]{I|L}EET{I|L} 10 2 + 90.851 0.0 0.0 7.7281 7.7281 96.58 0.0 0.0 0.0 16.020599913279625 60.48577533287428 16.020599913279625 40.02697515943353 0 0.9247425010840048 1.5228787452803376 2.6989700043360187 0.0 [{I|L}T]E[QT]{I|L}EET{I|L};[DP]{I|L}[WR]{M(Oxidation (M))|F}ET{I|L};[DP][WR]{I|L}{M(Oxidation (M))|F}ET{I|L};[DP]{I|L}[WR]E{M(Oxidation (M))|F}T{I|L};[DP][WR]{I|L}E{M(Oxidation (M))|F}T{I|L} 7.7281;4.3233;4.0672;3.7059;3.4499 -;-;-;-;- 363 1 1.164 35696.9 1.0 8736 5541 14272 HBL1_DMSO_200M_050219_1,14279 HBL1_DMSO_200M_050219_1,14279,LTTEQIEETL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14280 70.926 12.0 2177400.0 25 0 304340.0 + 41051 VMKGDDYLI 9 56 527.2677912746994 1052.5210296161988 2 527.2679321169853 MULTI CID FTMS 0 0 0 14272 3330697.25 0.0957432892830093 7 -0.4245452880859375 8 Unmodified _VMKGDDYLI_ REV__ENSG00000153707|ENST00000381196|PTPRD;REV__nc|ENSG00000153707|P23468-2|PTPRD;REV__nc|ENSG00000153707|P23468-4|PTPRD;REV__nc|ENSG00000153707|P23468-5|PTPRD;REV__nc|ENSG00000153707|P23468-6|PTPRD;REV__nc|ENSG00000153707|P23468-7|PTPRD 11.640296217721598 0.521594087909532 3 V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TE{I|L}{[ET]|[MV]} 8 -1 20.623 0.0 0.0 1.9594 0.0 0.0 103.04632002998204 0.0 103.04632002998204 0.0 9.363540398359298 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TE{I|L}{[ET]|[MV]} 1.9594 - 83 1 1.164 26438.3 1.0 8737 5541 14272 HBL1_DMSO_200M_050219_1,14280 HBL1_DMSO_200M_050219_1,14280,VMKGDDYLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14281 70.928 8.3 3257100.0 25 0 421280.0 + -1 GSFPSKPSAL 10 68 516.7710503184005 1031.527547703601 2 516.7718383669853 MULTI CID FTMS 0 0 0 14272 2802764.5 0.5030682923677248 -3 0.3191604614257812 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))GSFPSKPSAL_ REV__ENST00000596731.5_1_19:12780355-12780385:-|nuORF 12.174745833636583 0.6432616012102976 3 [NP]{I|L}E 4 -1 13.188 0.0 0.0 1.2785 0.0 0.0 0.0 575.281459406979 575.281459406979 1.4048510086750632 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}E 1.2785 - 24 1 1.164 26714.8 1.0 8738 5541 14272 HBL1_DMSO_200M_050219_1,14281 HBL1_DMSO_200M_050219_1,14281,GSFPSKPSAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14282 70.929 12.0 1960700.0 25 0 233350.0 + 26008 NLVRNLDVT 9 55 522.2960028201737 1042.5774527071474 2 522.2959472537041 MULTI CID FTMS 0 0 0 14272 2356460.75 0.3392591659988268 -6 0.5165634155273438 10 Unmodified _NLVRNLDVT_ REV__CON__A2A5Y0;REV__CON__Q15323;REV__CON__Q9D646;REV__CON__Q9UE12;REV__CON__REFSEQ:XP_986630;REV__ENSG00000094796|ENST00000251645|KRT31 1.844237919475145 0.850302753031785 3 {I|L} 1 -1 9.3971 0.0 0.0 0.90134 0.0 0.0 911.482327440349 0.0 911.482327440349 0.0 9.397130343970748 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.90134 + + 3 + 1 1.164 23573.7 1.0 8739 5541 14272 HBL1_DMSO_200M_050219_1,14282 HBL1_DMSO_200M_050219_1,14282,NLVRNLDVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14283 70.93 24.0 705830.0 25 0 67200.0 + 12767 GVPGVLLIPNQ 11 47 553.8305305936672 1105.6465082541342 2 553.8316528201103 MULTI CID FTMS 0 0 0 14272 1761977.75 0.8327631448974181 -6 0.5165634155273438 11 Unmodified _GVPGVLLIPNQ_ REV__ENSG00000183914|ENST00000572933|DNAH2;REV__nc|ENSG00000183914|Q9P225-2|DNAH2 1.4819007175156935 0.86815623132643 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.164 19412.3 1.0 8740 5541 14272 HBL1_DMSO_200M_050219_1,14283 HBL1_DMSO_200M_050219_1,14283,GVPGVLLIPNQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14284 70.931 19.0 1585300.0 25 0 201620.0 + 24440 MGYSHSLVI 9 63 503.7540381284351 1005.4935233236702 2 503.7544128298759 MULTI CID FTMS 0 0 0 14272 1625260.5 1.0 0 0.0 12 Unmodified _MGYSHSLVI_ ENSG00000179051|ENST00000375436|RCC2 24.67388899826682 0.2172451872415813 3 V{I|L} 2 7 20.701 0.0 0.0 2.0588 0.0 0.0 775.3296724709343 0.0 775.3296724709343 0.0 14.75895023531386 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + V{I|L} 2.0588 + + 18 + 1 1.164 31241.4 1.0 8741 5541 14272 HBL1_DMSO_200M_050219_1,14284 HBL1_DMSO_200M_050219_1,14284,MGYSHSLVI False True MGYSHSLVI 70.931061 503.754412829876 14422492.0 14272.0 ENSG00000179051|ENST00000375436|RCC2 4.468696594238281 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14285 70.932 31.0 930200.0 25 0 136170.0 16754 KFLEKLDQL 9 58 567.3301507522747 1132.6457485713493 2 567.3301269412041 MULTI CID FTMS 0 0 0 14272 1579244.375 1.0 0 0.0 13 Unmodified _KFLEKLDQL_ ENSG00000141384|ENST00000269142|TAF4B 1.6526216038709556 0.8569919814334629 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.164 27470.4 1.0 8742 5541 14272 HBL1_DMSO_200M_050219_1,14285 HBL1_DMSO_200M_050219_1,14285,KFLEKLDQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14286 70.933 18.0 1482500.0 25 0 101890.0 + 25586 NFIATVREV 9 62 524.7913879628207 1047.5682229924414 2 524.7930786013603 MULTI CID FTMS 0 0 0 14272 1391516.0 0.6860558411726267 -2 0.1793060302734375 14 Unmodified _NFIATVREV_ ENSG00000140382|ENST00000336216|HMG20A 12.240655878213236 0.5053430591993562 3 A{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 4 7 24.693 0.0 0.0 2.3571 0.0 0.0 602.3403187482437 0.0 602.3403187482437 0.0 8.49485002168009 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 A{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 2.3571 - 43 1 1.164 30161.5 1.0 8743 5541 14272 HBL1_DMSO_200M_050219_1,14286 HBL1_DMSO_200M_050219_1,14286,NFIATVREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14287 70.935 24.0 1405000.0 25 0 124040.0 8124 EPKAPEPIS 9 63 484.25839615362605 966.502239374052 2 484.2582275271416 MULTI CID FTMS 0 0 0 14272 1311411.625 0.0030987125107785 46 -3.56915283203125 15 Unmodified _EPKAPEPIS_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN 10.823927491677226 0.5436922275383211 3 CTV 3 9 24.481 0.0 0.0 2.533 0.0 0.0 645.369592744949 0.0 645.369592744949 0.0 10.501896823007826 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 CTV 2.533 - 42 + 1 1.164 34156.4 1.0 8744 5541 14272 HBL1_DMSO_200M_050219_1,14287 HBL1_DMSO_200M_050219_1,14287,EPKAPEPIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14288 70.936 42.0 1135100.0 25 0 132420.0 -1 0 61 320.211539464139 319.204262997539 1 320.2115356326103 MULTI CID FTMS 0 0 0 14272 1208873.875 0.1793924631426146 20 -1.6228256225585938 16 3 H{I|L} 2 -1 29.464 0.0 0.0 9.2304 0.0 0.0 0.0 66.0357912652953 66.0357912652953 7.213403050078782 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 H{I|L} 9.2304 - 8 + 1 1.164 47331.2 1.0 8745 5541 14272 HBL1_DMSO_200M_050219_1,14288 HBL1_DMSO_200M_050219_1,14288, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14289 70.94 244.0 434140.0 25 0 41779.0 -1 0 72 1052.419999295984 3154.2381684881525 3 1052.754931628704 MULTI CID FTMS 0 0 0 14272 920095.4375 0.7100955857377046 2 -0.147186279296875 17 3 ET{M(Oxidation (M))|F}K 4 -1 20.918 0.0 0.0 0.66316 0.0 0.0 2232.814597786784 413.1504610651001 2645.965058851884 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 ET{M(Oxidation (M))|F}K 0.66316 - 480 + 1 1.164 90694.5 1.0 8746 5541 14272 HBL1_DMSO_200M_050219_1,14289 HBL1_DMSO_200M_050219_1,14289, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14290 70.942 24.0 1198400.0 25 0 106850.0 11544 GIPYNSSVL 9 74 475.2534400095699 948.4923270859398 2 475.2541992068291 MULTI CID FTMS 0 0 0 14272 849306.0 0.6491842449531499 -2 0.1793060302734375 18 Unmodified _GIPYNSSVL_ nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1 19.438996006549623 0.310492472477042 3 {[VA]|[{I|L}G]}PYN 5 4 21.688 0.0 0.0 2.2865 0.0 0.0 0.0 401.2043381545523 401.2043381545523 9.213271985608529 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.3807196863200844 + {[VA]|[{I|L}G]}PYN 2.2865 + + 75 1 1.164 31866.4 1.0 8747 5541 14272 HBL1_DMSO_200M_050219_1,14290 HBL1_DMSO_200M_050219_1,14290,GIPYNSSVL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14291 70.943 59.0 911190.0 25 0 188430.0 + 27342 PHSSPLALL 9 88 467.7714589396702 933.5283649461404 2 467.7710449099541 MULTI CID FTMS 0 0 0 14272 793690.3125 0.0248193038345776 10 -0.6455917358398438 19 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 24.67388899826682 0.2172451872415813 3 {I|L}{I|L} 2 7 21.454 0.0 0.0 2.2981 0.0 0.0 689.3489348697717 0.0 689.3489348697717 0.0 8.979400086720375 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 2.2981 + + 80 + 1 1.164 48065.4 1.0 8748 5541 14272 HBL1_DMSO_200M_050219_1,14291 HBL1_DMSO_200M_050219_1,14291,PHSSPLALL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14292 70.944 42.0 639210.0 25 0 50905.0 -1 0 54 494.2889532248352 493.2816767582352 1 494.2863036990166 MULTI CID FTMS 0 0 0 14272 868615.0 1.0 0 0.0 20 3 T{I|L} 2 -1 21.013 0.0 0.0 4.2599 0.0 0.0 261.1390356222961 0.0 261.1390356222961 0.0 14.023722004121453 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 T{I|L} 4.2599 - 11 + 1 1.164 28975.4 1.0 8749 5541 14272 HBL1_DMSO_200M_050219_1,14292 HBL1_DMSO_200M_050219_1,14292, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14294 70.948 91.0 1071800.0 25 0 188030.0 + 42463 VTGLGPRR 8 96 428.2616896519712 854.5088263707423 2 428.2620727419853 MULTI CID FTMS 0 0 0 14293 772650.3125 0.0507951936189192 -5 0.4059219360351562 1 Unmodified _VTGLGPRR_ REV__ENSG00000134698|ENST00000373210|AGO4;REV__ENST00000252506.10_1_9:92221290-92221356:+|nuORF 0.6903765706972694 0.8201419426409876 3 {I|L} 1 -1 9.5329 0.0 0.0 1.1156 0.0 0.0 723.4138689506236 0.0 723.4138689506236 0.0 9.444247739386666 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1156 + + 2 + 1 1.164 82050.4 1.0 8750 5542 14293 HBL1_DMSO_200M_050219_1,14294 HBL1_DMSO_200M_050219_1,14294,VTGLGPRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14295 70.95 77.0 769440.0 25 0 93454.0 + 32511 SALNEVHLV 9 111 491.2723600893887 980.5301672455774 2 491.2736389040947 MULTI CID FTMS 0 0 0 14293 536197.125 0.3380895693102308 3 -0.2416763305664062 2 Unmodified _SALNEVHLV_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 30.63653989081413 0.1413794767160703 3 {[SA]|[TG]}{I|L}NEV[H{I|L}]V 9 0 + 43.043 0.0 0.0 4.3898 4.3898 78.808 0.0 0.0 0.0 20.18954998148708 5.686362358410122 5.686362358410122 5.835765856339485 0 0.2742275032520141 1.6989700043360187 0.0 0.0 + + {[SA]|[TG]}{I|L}NEV[H{I|L}]V;{[SA]|[TG]}{I|L}NEV[HV]{I|L};{[SA]|[TG]}{I|L}GGEV[H{I|L}]V;{[SA]|[TG]}{I|L}GGEV[HV]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HD]{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]DN{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[PA][KA]VEN[RP];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}N{M(Oxidation (M))|F}TV;{[RE]|[WV]}{I|L}{[QS]|[NT]}[H{I|L}]V;[HV]EN{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.3898;3.7946;3.4507;2.8555;2.1045;2.0759;2.0716;1.9951;1.6861;1.521 +;-;-;-;-;-;-;-;-;- + 502 + 1 1.164 50811.1 1.0 8751 5542 14293 HBL1_DMSO_200M_050219_1,14295 HBL1_DMSO_200M_050219_1,14295,SALNEVHLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14296 70.954 176.0 683580.0 25 0 92129.0 -1 0 88 905.9401266512108 1809.8657003692217 2 906.4426757693292 MULTI CID FTMS 0 0 0 14293 1426237.375 0.1097170743741802 -1 0.0305938720703125 3 3 KQ{I|L}DD{I|L}KVE{I|L} 10 -1 48.389 0.0 0.0 2.6736 0.0 0.0 610.1875404352812 0.0 610.1875404352812 0.0 0.0463201572055282 0.0 0.0 0 0.0 0.0 0.805462187404089 0.7742275032520141 KQ{I|L}DD{I|L}KVE{I|L} 2.6736 - 1839 + 1 1.164 84803.2 1.0 8752 5542 14293 HBL1_DMSO_200M_050219_1,14296 HBL1_DMSO_200M_050219_1,14296, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14297 70.956 105.0 2926900.0 25 0 300510.0 + 18963 LDENKIGAIP 10 177 535.2973366357057 1068.5801203382114 2 535.2983886599541 MULTI CID FTMS 0 0 0 14293 863135.4375 0.1233536726580038 -2 0.1562728881835937 4 Unmodified _LDENKIGAIP_ ENSG00000188306|ENST00000340806|LRRIQ4 62.57269311338072 0.0298375429882549 3 EVK{I|L}DD{I|L}Q 8 6 109.94 0.0 0.0 10.289 0.0 0.0 0.0 125.07250391177968 125.07250391177968 59.08706824318763 0.0 0.0 0.0 0 2.398301106832937 1.6989700043360187 1.4049471895720984 1.7856668758921828 EVK{I|L}DD{I|L}Q 10.289 - 9683 + 1 1.164 241118.2 1.0 8753 5542 14293 HBL1_DMSO_200M_050219_1,14297 HBL1_DMSO_200M_050219_1,14297,LDENKIGAIP True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14298 70.96 245.0 872880.0 25 0 70850.0 -1 0 158 577.3346369416569 576.3273604750568 1 577.3336059451103 MULTI CID FTMS 0 0 0 14293 682499.9375 0.3294006253424092 -2 0.1562728881835937 5 3 A{M(Oxidation (M))|F}{I|L}QV 5 -1 + 38.109 0.0 0.0 6.6124 6.6124 81.236 0.0 0.0 0.0 2.1091782158466543 2.1091782158466543 2.1091782158466543 2.1091782158466543 0 1.3494850021680094 0.0 0.0 0.6989700043360187 A{M(Oxidation (M))|F}{I|L}QV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}QV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}GAV;[Q{I|L}]{M(Oxidation (M))|F}AV;[Q{I|L}]A{M(Oxidation (M))|F}V;A{M(Oxidation (M))|F}{I|L}N{I|L};{[VA]|[{I|L}G]}A{M(Oxidation (M))|F}AV;{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}V;{[VA]|[{I|L}G]}AA{M(Oxidation (M))|F}V;A{M(Oxidation (M))|F}{I|L}[AG]V 6.6124;6.2464;6.109;5.5957;5.2415;5.1131;4.328;4.1151;3.9738;3.7439 -;-;-;-;-;-;-;-;-;- 197 + 1 1.164 159624.8 1.0 8754 5542 14293 HBL1_DMSO_200M_050219_1,14298 HBL1_DMSO_200M_050219_1,14298, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14299 70.966 336.0 762900.0 25 0 89131.0 7871 ELLQNPKEVL 10 203 394.8962164725943 1181.666820017983 3 394.8961059451103 MULTI CID FTMS 0 0 0 14293 511241.96875 0.1351033097395425 -4 0.3497543334960937 6 Unmodified _ELLQNPKEVL_ ENSG00000146833|ENST00000349062|TRIM4;nc|ENSG00000146833|Q9C037-3|TRIM4;nc|ENSG00000146833|Q9C037|TRIM4 36.39500950444726 0.1956349533321693 3 [AG]K{I|L}DD{I|L}K 8 9 62.315 0.0 0.0 5.2735 0.0 0.0 0.0 338.1720595951932 338.1720595951932 -3.1272328094042336 0.0 -3.1272328094042336 0.0 0 1.833839506110969 0.7958800173440752 1.3494850021680094 1.298455006504028 [AG]K{I|L}DD{I|L}K 5.2735 - 5504 1 1.164 199230.3 1.0 8755 5542 14293 HBL1_DMSO_200M_050219_1,14299 HBL1_DMSO_200M_050219_1,14299,ELLQNPKEVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14300 70.972 330.0 737470.0 25 0 74999.0 39709 VEGTKLLL 8 194 436.7753003675666 871.5360478019333 2 436.7752868533134 MULTI CID FTMS 0 0 0 14293 491518.46875 0.0475491780540976 -5 0.4059219360351562 7 Unmodified _VEGTKLLL_ ENSG00000163092|ENST00000409195|XIRP2;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2 5.230669730166228 0.792582437072536 3 [DP]E{I|L}YH 6 7 27.369 0.0 0.0 3.1403 0.0 0.0 0.0 114.1822871386552 114.1822871386552 10.368931070804592 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [DP]E{I|L}YH 3.1403 - 573 1 1.164 185194.6 1.0 8756 5542 14293 HBL1_DMSO_200M_050219_1,14300 HBL1_DMSO_200M_050219_1,14300,VEGTKLLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14301 70.978 331.0 499300.0 25 0 31246.0 + + 8147 KVPEIEVTV 9 176 507.2903971021708 1012.5662412711416 2 507.2971374392509 MULTI CID FTMS 0 0 0 -1 0 8 Unmodified _EPLRWLSI_ nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;ENSG00000263001|ENST00000573035|GTF2I 26.88365393820708 0.4786498634179528 3 [EP]{I|L}EVKW{I|L} 8 -1 + 60.571 0.0 0.0 5.9819 5.9819 85.813 0.0 0.0 0.0 7.629558869816009 13.010299956639813 7.629558869816009 7.629558869816009 0 0.3494850021680094 1.0969100130080565 0.2742275032520141 0.0 [EP]{I|L}EVKW{I|L};{[TV]|[{I|L}S]}[HM]VKVS{I|L};{[QN]|[E{I|L}]|[KN]}PEVKW{I|L};[{I|L}P]EEVKW{I|L};[H{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}VKVS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KP]NKVS{I|L};{[TV]|[{I|L}S]}{[QN]|[E{I|L}]|[KN]}PRVS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KP]NKW{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KP]{I|L}EVS{I|L};[EP]{I|L}{[TV]|[{I|L}S]}RW{I|L} 5.9819;5.2285;5.1473;4.893;4.5299;4.3237;4.0437;3.9812;3.8525;3.8329 -;-;-;-;-;-;-;-;-;- 2150 1 1.164 133244.9 1.0 8757 5542 14293 HBL1_DMSO_200M_050219_1,14301 HBL1_DMSO_200M_050219_1,14301,EPLRWLSI False False KVPEIEVTV 70.978421 507.297137439251 38877772.0 14293.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 0.47956616183122 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14302 70.986 399.0 546350.0 25 0 70646.0 + 33270 SFPEHRVLSF 10 163 406.88019467397936 1217.618754622138 3 406.8801147341728 MULTI CID FTMS 0 0 0 14293 347737.34375 0.6734799274735945 -2 0.1562728881835937 9 Unmodified _SFPEHRVLSF_ ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2 36.506200033944 0.1944608063770638 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PEHVV{[VA]|[{I|L}G]}S{M(Oxidation (M))|F} 11 2 + 46.762 0.0 0.0 3.8404 3.8404 83.036 0.0 0.0 0.0 8.490245060842305 0.3796513674315704 0.3796513674315704 15.109081448487256 0 0.3054621874040891 2.0 0.9049471895720984 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PEHVV{[VA]|[{I|L}G]}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PEHVV[YQ]{I|L};[RH]{I|L}VS{M(Oxidation (M))|F}{M(Oxidation (M))|F}PDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{I|L}AM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[RH]{I|L}VS{M(Oxidation (M))|F}P{M(Oxidation (M))|F}DT;[WY]H{I|L}VP{[VA]|[{I|L}G]}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[YV][W{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[EP]HR[HT]{I|L}{I|L}DT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YV]{M(Oxidation (M))|F}[W{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[WY]H{I|L}VP[YQ]{I|L} 3.8404;2.5996;2.3237;2.0972;2.0555;1.8575;1.4985;1.1194;0.84066;0.61083 -;-;-;-;-;-;-;-;-;- 974 + 1 1.164 171043.2 1.0 8758 5542 14293 HBL1_DMSO_200M_050219_1,14302 HBL1_DMSO_200M_050219_1,14302,SFPEHRVLSF False True SFPEHRVLSF 70.985554 406.880114734173 17982274.0 14293.0 nc|ENSG00000164823|Q9Y236|OSGIN2;;ENSG00000164823|ENST00000451899|OSGIN2 5.538320700327556 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14303 70.993 413.0 628530.0 25 0 72301.0 + 41236 VPFVGKVHI 9 216 332.5395527618367 994.5968288857102 3 332.5389892458916 MULTI CID FTMS 0 0 0 14293 330079.5625 0.309521456857014 -7 0.5471572875976562 10 Unmodified _VPFVGKVHI_ ENSG00000131979|ENST00000491895|GCH1;nc|ENSG00000131979|P30793-2|GCH1;nc|ENSG00000131979|P30793-3|GCH1;nc|ENSG00000131979|P30793-4|GCH1 26.88365393820708 0.1891292719743517 3 VP{M(Oxidation (M))|F}V[KG]VH{I|L} 9 0 + 54.29 0.0 0.0 5.4585 5.4585 80.996 0.0 0.0 0.0 23.255981871547178 4.499690086760474 4.499690086760474 4.499690086760474 0 0.729113595711156 0.6777807052660807 0.0 0.0 + + VP{M(Oxidation (M))|F}V[KG]VH{I|L};VP{M(Oxidation (M))|F}V[KG]V{I|L}H;V{I|L}MV[KG]VH{I|L};V{I|L}MV[KG]V{I|L}H;VP{M(Oxidation (M))|F}V[KG]H{I|L}V;V{I|L}MV[KG]H{I|L}V;[{I|L}T]EV[RK]H{I|L};[{I|L}T]E[RK]VH{I|L};[{I|L}T]EV[RK]{I|L}H;[{I|L}T]{I|L}D[RK]H{I|L} 5.4585;5.0061;4.3716;3.9192;3.811;2.724;2.0207;1.6251;1.5683;1.2507 +;-;-;-;-;-;-;-;-;- + 949 + 1 1.164 205008.7 1.0 8759 5542 14293 HBL1_DMSO_200M_050219_1,14303 HBL1_DMSO_200M_050219_1,14303,VPFVGKVHI False True VPFVGKVHI 70.992913 332.538989245892 37295457.0 14293.0 ENSG00000131979|ENST00000491895|GCH1;;nc|ENSG00000131979|P30793-2|GCH1;;nc|ENSG00000131979|P30793-4|GCH1;;nc|ENSG00000131979|P30793-3|GCH1 5.682604630788167 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14304 71.0 393.0 215960.0 25 0 51969.0 -1 0 40 1157.4575084532182 3469.350695959855 3 1157.791064441204 MULTI CID FTMS 0 0 0 14293 288827.625 0.1440186702746009 -4 0.3497543334960937 11 3 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.13271 0.0 0.0 2800.006470961612 519.2598971002561 3319.2663680618675 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.13271 - 4 + 1 1.164 64483.6 1.0 8760 5542 14293 HBL1_DMSO_200M_050219_1,14304 HBL1_DMSO_200M_050219_1,14304, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14305 71.003 143.0 500440.0 25 0 39311.0 + 43033 VYAFSARPL 9 103 512.2849883953116 1022.5554238574232 2 512.2844726443291 MULTI CID FTMS 0 0 0 14293 286556.5 0.1747146984513589 6 -0.393951416015625 12 Unmodified _VYAFSARPL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 26.020703789607367 0.2001090068861241 3 VYA{M(Oxidation (M))|F}S{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L} 9 0 + 65.288 0.0 0.0 6.3848 6.3848 83.625 0.0 0.0 0.0 51.36046240493749 1.0924374808178214 1.0924374808178214 4.193474691972995 0 0.9247425010840048 2.0 0.0 0.0 + + VYA{M(Oxidation (M))|F}S{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L};VY{I|L}[WK]AM{I|L};VY{I|L}[WK]VC{I|L};VYA{M(Oxidation (M))|F}[WK]P{I|L};VYA[H{I|L}][NP]P{I|L};VYA[{I|L}P][HN]P{I|L};VYA[{I|L}P][R{M(Oxidation (M))|F}]{[SA]|[TG]};[YV]A[WK]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};VY{I|L}[HA][NP]P{I|L};{[TV]|[{I|L}S]}[RV]S{M(Oxidation (M))|F}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.3848;5.9747;5.858;5.7513;4.5511;4.0845;3.9811;3.7793;3.7678;3.6811 +;-;-;-;-;-;-;-;-;- + 320 + 1 1.164 61889.0 1.0 8761 5542 14293 HBL1_DMSO_200M_050219_1,14305 HBL1_DMSO_200M_050219_1,14305,VYAFSARPL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14306 71.011 400.0 413130.0 25 0 34789.0 -1 0 68 1152.1331100340517 3453.377500702355 3 1152.799487292767 MULTI CID FTMS 0 0 0 14293 272163.6875 0.1695181557177812 -4 0.3497543334960937 13 3 Y 1 -1 6.9897 0.0 0.0 0.2024 0.0 0.0 1255.4294505663408 2031.8159884088504 3287.245438975191 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.2024 - 9 + 1 1.164 116346.9 1.0 8762 5542 14293 HBL1_DMSO_200M_050219_1,14306 HBL1_DMSO_200M_050219_1,14306, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14307 71.02 472.0 558280.0 25 0 72241.0 + 15277 IPHTPIEI 8 227 460.26587198949767 918.5171910457954 2 460.2674133181572 MULTI CID FTMS 0 0 0 14293 287668.6875 0.5916936361456795 1 -0.1165924072265625 14 Unmodified _IPHTPIEI_ ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR 78.44472497914707 0.0986812004920242 3 [HT]P{I|L}P{I|L}E{I|L} 8 4 + 66.863 0.0 0.0 7.2795 7.2795 85.681 0.0 0.0 0.0 3.7064900579612825 16.40978057358332 3.7064900579612825 3.7064900579612825 0 0.6747425010840047 0.3665315444204134 1.7856668758921828 0.0 [HT]P{I|L}P{I|L}E{I|L};[TP]H{I|L}P{I|L}E{I|L};[{I|L}P]HTP{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}P{I|L}E{I|L};[HT]P{I|L}PE{I|L}{I|L};[{I|L}P]THP{I|L}E{I|L};[TP]H{I|L}PE{I|L}{I|L};[HT]P{I|L}EP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}TP{I|L}E{I|L};[{I|L}P]HTPE{I|L}{I|L} 7.2795;6.8759;6.7032;6.6389;6.5976;6.4061;6.1941;6.1907;6.0854;6.0213 -;-;+;-;-;-;-;-;-;- + 2178 1 1.164 201343.6 1.0 8763 5542 14293 HBL1_DMSO_200M_050219_1,14307 HBL1_DMSO_200M_050219_1,14307,IPHTPIEI True True IPHTPIEI 71.0196 460.267413318157 8979733.0 14293.0 ENSG00000183337|ENST00000378444|BCOR;;nc|ENSG00000183337|Q6W2J9-3|BCOR;;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;;nc|ENSG00000183337|Q6W2J9-2|BCOR;;nc|ENSG00000183337|Q6W2J9-4|BCOR 4.452793598175049 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14308 71.026 373.0 294750.0 25 0 35770.0 + 14238 IDTRRPAPKL 10 154 583.853891409498 1165.693229885796 2 584.3555786013603 MULTI CID FTMS 0 0 0 14293 269306.65625 0.3318807874364106 -5 0.4059219360351562 15 Unmodified _IDTRRPAPKL_ REV__ENSG00000070047|ENST00000264555|PHRF1;REV__nc|ENSG00000070047|Q9P1Y6-2|PHRF1;REV__nc|ENSG00000070047|Q9P1Y6-3|PHRF1 13.90604991867851 0.6142120002215601 3 {NN|[MP]|[D{I|L}]|[EV]}KVE 5 -1 32.695 0.0 0.0 2.8047 0.0 0.0 0.0 578.3545817747209 578.3545817747209 17.706065423278034 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.055462187404089 0.0 {NN|[MP]|[D{I|L}]|[EV]}KVE 2.8047 - 570 1 1.164 86313.1 1.0 8764 5542 14293 HBL1_DMSO_200M_050219_1,14308 HBL1_DMSO_200M_050219_1,14308,IDTRRPAPKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14309 71.036 535.0 275170.0 25 0 18444.0 40024 VGFAQGVK 8 158 403.2326003408474 0 403.5724975466728 PEAK CID FTMS 0 0 0 14293 143713.859375 0.5158850669018796 -7 0.5471572875976562 16 Unmodified _VGFAQGVK_ ENST00000239906.9_1_5:137683050-137683236:+|nuORF 5.760428011301431 0.5786759180849727 3 Y{I|L}W 3 8 13.188 0.0 0.0 1.6393 0.0 0.0 68.02026989440544 271.1786287897094 339.19889868411485 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}W 1.6393 - 57 + 1 1.164 114433.2 1.0 8765 5542 14293 HBL1_DMSO_200M_050219_1,14309 HBL1_DMSO_200M_050219_1,14309,VGFAQGVK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14310 71.038 121.0 466150.0 25 0 35198.0 45622 YVLFLLQPTV 10 71 596.8535791748257 0 596.8052856326103 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _YVLFLLQPTV_ ENSG00000122584|ENST00000405863|NXPH1 3.944395688203298 0.3961065659209837 3 V{M(Oxidation (M))|F}{I|L} 3 7 14.693 0.0 0.0 1.2329 0.0 0.0 189.1430355792358 640.3073095920728 829.4503451713085 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{M(Oxidation (M))|F}{I|L} 1.2329 - 53 + 1 1.164 51716.4 1.0 8766 5542 14293 HBL1_DMSO_200M_050219_1,14310 HBL1_DMSO_200M_050219_1,14310,YVLFLLQPTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14311 71.046 394.0 413200.0 25 0 49475.0 + -1 WCCRPWCRWSR 11 127 855.3706955151908 1708.7268380971816 2 855.3716308474541 MULTI CID FTMS 0 0 0 14293 272035.75 0.7783650812512971 -1 0.0305938720703125 18 3 Carbamidomethyl (C) _WC(Carbamidomethyl (C))C(Carbamidomethyl (C))RPWC(Carbamidomethyl (C))RWSR_ REV__ENST00000371080.5_1_1:64239708-64475003:+|nuORF 0.0 0.8751479354844584 3 {[QV]|[N{I|L}]|[RA]|[KV]}[R{M(Oxidation (M))|F}]EDPQV 9 -1 40.402 0.0 0.0 2.3644 0.0 0.0 0.0 607.1661446146762 607.1661446146762 23.913187455970547 0.0 0.0 0.0 0 0.0 2.0 1.1549471895720984 0.7302046884880937 {[QV]|[N{I|L}]|[RA]|[KV]}[R{M(Oxidation (M))|F}]EDPQV 2.3644 - 1541 1 1.164 111248.5 1.0 8767 5542 14293 HBL1_DMSO_200M_050219_1,14311 HBL1_DMSO_200M_050219_1,14311,WCCRPWCRWSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14312 71.054 441.0 334700.0 25 0 32579.0 + 16429 KAAGGIEL 8 142 379.724374235724 757.434195538248 2 379.7238036990166 MULTI CID FTMS 0 0 0 14293 234380.515625 1.0 0 0.0 19 Unmodified _KAAGGIEL_ ENSG00000113552|ENST00000311337|GNPDA1;ENST00000507559.1_1_5:141384487-141385853:-|nuORF 12.531546534597751 0.7257836412119636 3 [RD]{I|L}{I|L}E{I|L} 6 5 + 49.458 0.0 0.0 6.5297 6.5297 92.844 0.0 0.0 0.0 19.548544955876388 37.67507108379196 19.548544955876388 26.91097690408581 0 0.4247425010840047 0.6989700043360187 0.2396518287104437 0.5189301784845296 [RD]{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[RV]E{I|L};[AG][KQ]{I|L}E{I|L} 6.5297;2.9767;1.8932 -;-;- 80 1 1.164 118677.3 1.0 8768 5542 14293 HBL1_DMSO_200M_050219_1,14312 HBL1_DMSO_200M_050219_1,14312,KAAGGIEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14313 71.061 364.0 1627100.0 25 0 349280.0 27690 PLKFVKEI 8 231 487.3074604071781 972.600367881156 2 487.3067199587822 MULTI CID FTMS 0 0 0 14293 244691.21875 0.6523506887360577 1 -0.1165924072265625 20 Unmodified _PLKFVKEI_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 34.18733598223924 0.3315367612694167 3 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}AV 6 6 33.478 0.0 0.0 3.4421 0.0 0.0 0.0 330.1819468208624 330.1819468208624 7.676960404283399 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5994850021680094 0.555462187404089 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}AV 3.4421 - 1801 1 1.164 444504.3 1.0 8769 5542 14293 HBL1_DMSO_200M_050219_1,14313 HBL1_DMSO_200M_050219_1,14313,PLKFVKEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14315 71.065 0.95 48845000.0 25 0 3512700.0 + 21775 LPNAVITRI 9 70 498.8137031573884 995.6128533815768 2 498.8143493533134 MULTI CID FTMS 0 0 0 14314 54857748.0 0.561566789390665 2 -0.1250839233398437 1 Unmodified _LPNAVITRI_ ENSG00000148229|ENST00000374171|POLE3;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 32.037481411007896 0.1235546156350648 3 {I|L}PNAV{I|L} 6 3 74.998 0.0 0.0 7.5328 0.0 0.0 0.0 385.22019373111567 385.22019373111567 43.7113751626007 0.0 0.0 0.0 0 1.385151878060192 1.6989700043360187 0.0 0.0 + {I|L}PNAV{I|L} 7.5328 + + 107 + 1 1.166 42437.3 1.0 8770 5543 14314 HBL1_DMSO_200M_050219_1,14315 HBL1_DMSO_200M_050219_1,14315,LPNAVITRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14316 71.066 3.7 8335000.0 25 0 2064200.0 + 12401 GTIGLIHAV 9 51 440.7661547264594 879.5177565197189 2 440.7664062380791 MULTI CID FTMS 0 0 0 14314 12440818.0 0.3545515440160479 2 -0.1250839233398437 2 Unmodified _GTIGLIHAV_ ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF 19.438996006549623 0.310492472477042 3 {I|L}{I|L}G[RP] 5 7 16.198 0.0 0.0 1.8417 0.0 0.0 325.17537123847814 0.0 325.17537123847814 0.0 3.521825181113627 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}G[RP] 1.8417 - 40 1 1.166 29814.8 1.0 8771 5543 14314 HBL1_DMSO_200M_050219_1,14316 HBL1_DMSO_200M_050219_1,14316,GTIGLIHAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14317 71.067 3.1 18960000.0 25 0 3183200.0 + 9108 FFPDKPITQY 10 62 628.3215495725626 1254.6285462119251 2 628.3218871951103 MULTI CID FTMS 0 0 0 14314 16562095.0 0.5144268540583549 2 -0.1250839233398437 3 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 49.55428908609986 0.0827668555218455 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}]QY 10 3 + 53.307 0.0 0.0 4.2488 4.2488 70.021 0.0 0.0 0.0 42.50463215022123 16.532125137753432 16.532125137753432 0.1230450566754512 0 0.4247425010840047 0.0 0.7614393726401688 0.75 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}]QY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}][AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]T[AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]T[AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[{I|L}P]P[QP];[DP]K[{I|L}P]TQY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[DP]P[K{I|L}]TQY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[DP]PT[K{I|L}]QY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 4.2488;4.239;4.1755;3.2591;3.0192;2.9556;2.8627;1.9709;1.8158;1.5759 -;-;+;-;-;-;-;-;-;- + 345 + 1 1.166 50601.1 1.0 8772 5543 14314 HBL1_DMSO_200M_050219_1,14317 HBL1_DMSO_200M_050219_1,14317,FFPDKPITQY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14318 71.068 8.2 9592500.0 25 0 1049800.0 + 6080 DSQILPKI 8 91 457.2712833509268 912.5280137686536 2 457.2712890505791 MULTI CID FTMS 0 0 0 14314 6875611.5 0.5886677873333725 2 -0.1250839233398437 4 Unmodified _DSQILPKI_ ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF 54.773552608820026 0.1167943196628344 3 [AG]SD{I|L} 5 7 35.367 0.0 0.0 3.8757 0.0 0.0 0.0 466.3016713840794 466.3016713840794 14.136890462689138 0.0 0.0 0.0 0 1.0 2.0 0.9247425010840048 0.0 [AG]SD{I|L} 3.8757 - 121 1 1.166 64986.6 1.0 8773 5543 14314 HBL1_DMSO_200M_050219_1,14318 HBL1_DMSO_200M_050219_1,14318,DSQILPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14319 71.07 11.0 4395700.0 25 0 717570.0 + 13248 HIIENIVAV 9 62 504.297453868246 1006.580354803292 2 504.2977783083916 MULTI CID FTMS 0 0 0 14314 4245911.5 0.0582435057823316 -4 0.3264923095703125 5 Unmodified _HIIENIVAV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 30.63653989081413 0.1413794767160703 3 [H{I|L}]{I|L}EN{I|L}VAV 9 0 + 58.835 0.0 0.0 5.845 5.845 87.264 0.0 0.0 0.0 19.366130211356065 32.63682493045401 19.366130211356065 9.208187539523747 0 0.7742275032520141 1.2218487496163564 0.0 0.0 + + [H{I|L}]{I|L}EN{I|L}VAV;[H{I|L}]{I|L}EGG{I|L}VAV 5.845;4.9302 +;- + 90 1 1.166 45929.9 1.0 8774 5543 14314 HBL1_DMSO_200M_050219_1,14319 HBL1_DMSO_200M_050219_1,14319,HIIENIVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14320 71.071 20.0 679210.0 25 0 83904.0 + 41717 VPSRETVVVTA 11 34 579.3302196584883 1156.6458863837763 2 579.3308593630791 MULTI CID FTMS 0 0 0 14314 2971216.5 0.2759174492115799 -3 0.2728652954101562 6 Unmodified _VPSRETVVVTA_ REV__ENST00000549578.5_1_12:110933995-110939909:-|nuORF;REV__ENST00000549970.5_1_12:110937338-110939909:-|nuORF;REV__ENST00000551655.1_1_12:110934722-110939909:-|nuORF;REV__ENST00000553128.5_1_12:110936645-110939909:-|nuORF 2.0860074813731053 0.8653060162460054 3 VV{M(Oxidation (M))|F} 3 -1 16.198 0.0 0.0 1.4004 0.0 0.0 289.1684826745953 519.2734469049436 808.441929579539 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV{M(Oxidation (M))|F} 1.4004 - 11 + 1 1.166 20079.0 1.0 8775 5543 14314 HBL1_DMSO_200M_050219_1,14320 HBL1_DMSO_200M_050219_1,14320,VPSRETVVVTA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14321 71.072 25.0 794120.0 25 0 67724.0 + -1 PVQRHIRQ 8 48 538.3092303622403 1074.6039077912806 2 538.3091308474541 MULTI CID FTMS 0 0 0 14314 2429813.0 0.4200069729980417 -4 0.3264923095703125 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PVQRHIRQ_ REV__ENST00000312033.3_1_9:117150179-117150272:-|nuORF 0.6903765706972694 0.8201419426409876 3 {I|L} 1 -1 10.596 0.0 0.0 0.98603 0.0 0.0 943.5086909717478 0.0 943.5086909717478 0.0 10.595932038596043 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.98603 + + 1 + 1 1.166 21294.3 1.0 8776 5543 14314 HBL1_DMSO_200M_050219_1,14321 HBL1_DMSO_200M_050219_1,14321,PVQRHIRQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14322 71.073 37.0 3499000.0 25 0 454700.0 + 39155 TYNTQVNFM 9 129 559.2528860906724 1116.4912192481447 2 559.2538329958916 MULTI CID FTMS 0 0 0 14314 2364480.0 0.4490190526595844 2 -0.1250839233398437 8 Unmodified _TYNTQVNFM_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7684558-7685401:-|nuORF 118.89474601620944 0.0019711750475752 3 [YT]NTQVN{M(Oxidation (M))|F}M 9 0 + 83.008 0.0 0.0 7.4348 7.4348 90.665 0.0 0.0 0.0 8.469100130080562 7.944539621753535 7.944539621753535 8.469100130080562 0 1.3812033112643842 2.0 1.841129063296272 1.3494850021680094 + + [YT]NTQVN{M(Oxidation (M))|F}M;{[QS]|[NT]}YTQVN{M(Oxidation (M))|F}M;[YT]GGTQVN{M(Oxidation (M))|F}M;[YT]NTQVGG{M(Oxidation (M))|F}M;[YT]NT[AG]VN{M(Oxidation (M))|F}M;{[QS]|[NT]}YTQVGG{M(Oxidation (M))|F}M;{[QS]|[NT]}YT[AG]VN{M(Oxidation (M))|F}M;[YT]GGTQVGG{M(Oxidation (M))|F}M;[YT]NT[AG]VGG{M(Oxidation (M))|F}M;{[QS]|[NT]}Q[YT]VN{M(Oxidation (M))|F}M 7.4348;6.6762;6.61;6.61;6.61;5.8515;5.8515;5.7892;5.7892;5.7067 +;-;-;-;-;-;-;-;-;- + 3857 1 1.166 104828.3 1.0 8777 5543 14314 HBL1_DMSO_200M_050219_1,14322 HBL1_DMSO_200M_050219_1,14322,TYNTQVNFM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14323 71.074 41.0 1659500.0 25 0 400320.0 5207 DITYLRIPV 9 80 545.3163856108691 1088.6182182885382 2 545.3173705935478 MULTI CID FTMS 0 0 0 14314 1913270.5 0.4199928964722292 -4 0.3264923095703125 9 Unmodified _DITYLRIPV_ ENSG00000149599|ENST00000339738|DUSP15;ENST00000493115.1_1_20:30452068-30458299:-|nuORF;nc|ENSG00000149599|Q9H1R2-2|DUSP15;nc|ENSG00000149599|Q9H1R2|DUSP15 2.302733041254933 0.8342969208511092 3 {I|L} 1 8 8.4949 0.0 0.0 0.78033 0.0 0.0 957.5232456096304 0.0 957.5232456096304 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.78033 + + 10 + 1 1.166 60699.3 1.0 8778 5543 14314 HBL1_DMSO_200M_050219_1,14323 HBL1_DMSO_200M_050219_1,14323,DITYLRIPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14324 71.076 13.0 2744900.0 25 0 176670.0 + 44541 YPESLVRVV 9 68 531.3019568322328 0 531.3009521365166 PEAK CID FTMS 0 0 0 14314 1790927.75 0.6357687227863769 -1 0.1165924072265625 10 Unmodified _YPESLVRVV_ ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6 22.736283301280096 0.1762661025464585 3 PES{I|L} 4 5 23.488 0.0 0.0 2.2146 0.0 0.0 163.0585251071837 468.2967012994751 631.3552264066587 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 + PES{I|L} 2.2146 + + 24 + 1 1.166 37664.0 1.0 8779 5543 14314 HBL1_DMSO_200M_050219_1,14324 HBL1_DMSO_200M_050219_1,14324,YPESLVRVV False True YPESLVRVV 71.075539 531.300952136517 24740356.0 14314.0 nc|ENSG00000032444|Q8IY17-5|PNPLA6;;nc|ENSG00000032444|Q8IY17-3|PNPLA6;;nc|ENSG00000032444|Q8IY17|PNPLA6;;ENSG00000032444|ENST00000600737|PNPLA6;;nc|ENSG00000032444|Q8IY17-2|PNPLA6 3.9176297187805176 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14325 71.078 147.0 395900.0 25 0 48870.0 + 14550 IHHPLQSYML 10 64 619.8185039738922 1237.6224550145844 2 619.8185302615166 MULTI CID FTMS 0 0 0 14314 1530643.125 0.4917112400605836 -3 0.2728652954101562 11 Unmodified _IHHPLQSYML_ REV__ENSG00000103319|ENST00000263026|EEF2K 12.240655878213236 0.6421556946785427 3 {I|L}QKDD 5 -1 33.143 0.0 0.0 2.678 0.0 0.0 0.0 635.3087862604124 635.3087862604124 22.30581027237423 0.0 0.0 0.0 0 0.6677353201839438 0.0 0.4247425010840047 0.0 {I|L}QKDD 2.678 - 14 + 1 1.166 49790.3 1.0 8780 5543 14314 HBL1_DMSO_200M_050219_1,14325 HBL1_DMSO_200M_050219_1,14325,IHHPLQSYML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14326 71.082 186.0 451490.0 25 0 49183.0 -1 FWKVRKRRCLL 11 87 781.4673188645763 1560.9200847959526 2 781.9704467654228 MULTI CID FTMS 0 0 0 14314 1076988.125 1.0 0 0.0 12 Carbamidomethyl (C) _FWKVRKRRC(Carbamidomethyl (C))LL_ ENST00000526688.1_1_8:38269909-38271480:-|nuORF 0.0 0.8751479354844584 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KV{M(Oxidation (M))|F}{I|L} 10 -1 50.301 0.0 0.0 3.2225 0.0 0.0 0.0 358.218008273345 358.218008273345 31.89971115335497 0.0 0.0 0.0 0 0.0 1.154901959985743 1.25 0.2887254899964357 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KV{M(Oxidation (M))|F}{I|L} 3.2225 - 717 1 1.166 61625.6 1.0 8781 5543 14314 HBL1_DMSO_200M_050219_1,14326 HBL1_DMSO_200M_050219_1,14326,FWKVRKRRCLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14327 71.086 184.0 924150.0 25 0 67311.0 + + -1 SNTQAERSIIGM 12 125 674.8292185657306 1347.643884198261 2 674.8298828005791 MULTI CID FTMS 0 0 0 14314 1074406.125 0.3821513926580507 2 -0.1250839233398437 13 Oxidation (M) _SQQEDIVM(Oxidation (M))RNI_ ENSG00000184330|ENST00000368729|S100A7A;ENSG00000143556|ENST00000368723|S100A7 28.49450938151212 0.4231428536161201 3 {[QS]|[NT]}EQAERS{I|L}{I|L}GM 12 -1 + 102.18 0.0 0.0 7.5818 7.5818 82.196 0.0 0.0 0.0 1.140833589445279 16.611814434466183 1.140833589445279 1.140833589445279 0 2.6549471895720984 0.7958800173440752 2.180884548956689 0.0 {[QS]|[NT]}EQAERS{I|L}{I|L}GM;{[QD]|[EN]|[WG]|[KD]|[RS]}TQAERS{I|L}{I|L}GM;[QT]DQAERS{I|L}{I|L}GM;{[SA]|[TG]}ADQAERS{I|L}{I|L}GM;{[QS]|[NT]}QEAERS{I|L}{I|L}GM;{[SA]|[TG]}GEQAERS{I|L}{I|L}GM;{[QS]|[NT]}EQAE[VG]S{I|L}{I|L}GM;{[QS]|[NT]}E[AG]AERS{I|L}{I|L}GM;{[QD]|[EN]|[WG]|[KD]|[RS]}TQAE[VG]S{I|L}{I|L}GM;{[QD]|[EN]|[WG]|[KD]|[RS]}T[AG]AERS{I|L}{I|L}GM 7.5818;7.4971;7.2326;7.2068;7.099;6.9654;6.9067;6.9067;6.822;6.822 -;-;-;-;-;-;-;-;-;- 3985 1 1.166 134403.1 1.0 8782 5543 14314 HBL1_DMSO_200M_050219_1,14327 HBL1_DMSO_200M_050219_1,14327,SQQEDIVMRNI False False SNTQAERSIIGM 71.085679 674.829882800579 37520440.0 14314.0 ENSG00000184330|ENST00000368729|S100A7A;;ENSG00000143556|ENST00000368723|S100A7 10.804311434427897 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14328 71.09 221.0 1052500.0 25 0 203750.0 -1 0 123 933.4162125610932 1864.817872188986 2 933.4137451052666 MULTI CID FTMS 0 0 0 14314 789762.9375 0.5843321908306297 2 -0.1250839233398437 14 3 {I|L}PDK[{I|L}P]TQY 9 -1 42.643 0.0 0.0 2.2867 0.0 0.0 791.2560413504174 0.0 791.2560413504174 0.0 21.092956463017867 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.9802046884880936 {I|L}PDK[{I|L}P]TQY 2.2867 - 2093 + 1 1.166 156387.5 1.0 8783 5543 14314 HBL1_DMSO_200M_050219_1,14328 HBL1_DMSO_200M_050219_1,14328, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14329 71.094 224.0 943450.0 25 0 60056.0 -1 0 128 917.9192018143148 1833.8238506954287 2 917.9208251833916 MULTI CID FTMS 0 0 0 14314 739293.375 1.0 0 0.0 15 3 {NN|[MP]|[D{I|L}]|[EV]}WPC[H{I|L}]VE{I|L}K 11 -1 53.536 0.0 0.0 2.9194 0.0 0.0 0.0 497.058322701542 497.058322701542 3.424104349302901 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.9291746928241125 0.0 {NN|[MP]|[D{I|L}]|[EV]}WPC[H{I|L}]VE{I|L}K 2.9194 - 7377 1 1.166 137037.3 1.0 8784 5543 14314 HBL1_DMSO_200M_050219_1,14329 HBL1_DMSO_200M_050219_1,14329, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14330 71.099 246.0 418010.0 25 0 83363.0 -1 0 87 924.9167968630792 0 924.9167968630792 PEAK CID FTMS 0 0 0 -1 0 16 3 {I|L}[NS]E 4 -1 19.297 0.0 0.0 1.0443 0.0 0.0 610.1928649445596 791.4043673150999 1401.5972322596594 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 1.174742501084005 0.0 {I|L}[NS]E 1.0443 - 343 + 1 1.166 71110.7 1.0 8785 5543 14314 HBL1_DMSO_200M_050219_1,14330 HBL1_DMSO_200M_050219_1,14330, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14331 71.103 246.0 949820.0 25 0 85422.0 + 30902 RISADTIFVTA 11 138 597.3307361082191 1192.646919283238 2 597.3314086794853 MULTI CID FTMS 0 0 0 14314 504681.21875 0.1677692306861242 -4 0.3264923095703125 17 Unmodified _RISGETIFVTA_ ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000070371|P53675-2|CLTCL1 39.41278653710922 0.2214416661041839 3 {[TV]|[{I|L}S]}A[RD]T{I|L}{M(Oxidation (M))|F}VTA 11 4 + 86.407 0.0 0.0 7.2449 7.2449 86.873 0.0 0.0 0.0 7.577320582526468 16.57577319177794 7.577320582526468 4.771212547196626 0 0.8807196863200843 1.3979400086720375 1.3851518780601924 0.3807196863200844 {[TV]|[{I|L}S]}A[RD]T{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}A{M(Oxidation (M))|F}[QP]{I|L}{M(Oxidation (M))|F}VTA;[TA]V[RD]T{I|L}{M(Oxidation (M))|F}VTA;[TA]V{M(Oxidation (M))|F}[QP]{I|L}{M(Oxidation (M))|F}VTA;[{M(Oxidation (M))|F}V]TA[QP]{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}[K{I|L}][WE]{M(Oxidation (M))|F}VTA;[TP]K{[ES]|[DT]|[{I|L}C]}T{I|L}{M(Oxidation (M))|F}VTA;{[QV]|[N{I|L}]|[RA]|[KV]}V{[ES]|[DT]|[{I|L}C]}T{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}[K{I|L}]{[WT]|[RM]}{M(Oxidation (M))|F}VEA;{[TV]|[{I|L}S]}[K{I|L}]{[CA]|SS}{I|L}{M(Oxidation (M))|F}VEA 7.2449;6.8449;6.6096;6.2096;5.9037;5.2701;4.5749;4.4589;3.8862;3.7851 -;-;-;-;-;-;-;-;-;- 607 1 1.166 177599.7 1.0 8786 5543 14314 HBL1_DMSO_200M_050219_1,14331 HBL1_DMSO_200M_050219_1,14331,RISGETIFVTA False True RISADTIFVTA 71.10332 597.331408679485 58458222.0 14314.0 ENSG00000070371|ENST00000427926|CLTCL1;;nc|ENSG00000070371|P53675-2|CLTCL1 5.882447083791097 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14332 71.108 260.0 475350.0 25 0 54422.0 + 9080 FFFILYRQYFY 11 91 803.9088813641923 1605.8032097951846 2 803.9094726443291 MULTI CID FTMS 0 0 0 14314 514172.75 0.2167479549703547 2 -0.1250839233398437 18 Unmodified _FFFILYRQYFY_ REV__ENST00000502773.5_1_4:157683422-157683533:-|nuORF 0.3506318815782774 0.8734936314171269 3 {I|L}PNAV{I|L}T[R{I|L}] 9 -1 36.687 0.0 0.0 2.2846 0.0 0.0 610.1878372135283 0.0 610.1878372135283 0.0 2.372918294980749 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}PNAV{I|L}T[R{I|L}] 2.2846 - 876 + 1 1.166 90405.7 1.0 8787 5543 14314 HBL1_DMSO_200M_050219_1,14332 HBL1_DMSO_200M_050219_1,14332,FFFILYRQYFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14333 71.113 275.0 689660.0 25 0 56477.0 35721 SVHGDFLNV 9 215 494.2482008888989 986.4818488445976 2 494.2266113162041 MULTI CID FTMS 0 0 0 -1 0 19 Unmodified _SVHGDFLNV_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 36.12702656103203 0.0967173616627612 3 [{I|L}T]E 3 8 27.676 0.0 0.0 2.8055 0.0 0.0 0.0 640.2838562511008 640.2838562511008 7.402864836725833 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 [{I|L}T]E 2.8055 - 2589 1 1.166 144071.3 1.0 8788 5543 14314 HBL1_DMSO_200M_050219_1,14333 HBL1_DMSO_200M_050219_1,14333,SVHGDFLNV True False KVIDGLETL 71.113233 494.226611316204 2295453.25 14314.0 ENSG00000240344|ENST00000392283|PPIL3;;nc|ENSG00000240344|Q9H2H8-2|PPIL3;;ENST00000463866.1_1_2:201736120-201746236:-|nuORF 1.4467734893163045 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14334 71.119 319.0 587400.0 25 0 53110.0 13346 HLEEDLKEVL 10 180 408.8854195066518 1223.6344291201551 3 408.8852111697197 MULTI CID FTMS 0 0 0 14314 434618.875 0.4345556199975641 -4 0.3264923095703125 20 Unmodified _HLEEDLKEVL_ ENSG00000101057|ENST00000217026|MYBL2;nc|ENSG00000101057|P10244-2|MYBL2 39.21299971606389 0.1658776112144286 3 {[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}D{I|L}KVE{I|L} 10 4 + 77.607 0.0 0.0 6.3424 6.3424 91.315 0.0 0.0 0.0 11.438689150928298 49.15882527345791 11.438689150928298 16.576447055154524 0 0.7614393726401688 0.0 2.234636880228201 1.0021934810768762 {[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}D{I|L}KVE{I|L};[QP]T[C(Carbamidomethyl (C))H]{I|L}KVE{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HHD{I|L}KVE{I|L};[AG]PT[C(Carbamidomethyl (C))H]{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}S{I|L}RVE{I|L};{[QN]|[E{I|L}]|[KN]}[WP][NP]KVE{I|L};{[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}S{I|L}[VG]VE{I|L};[PG]AT[C(Carbamidomethyl (C))H]{I|L}KVE{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HHS{I|L}RVE{I|L};[VP]VDD[NP]KVE{I|L} 6.3424;4.9877;4.8947;4.6821;4.486;4.0506;3.737;3.701;3.6214;3.4611 -;-;-;-;-;-;-;-;-;- 2123 1 1.166 157687.6 1.0 8789 5543 14314 HBL1_DMSO_200M_050219_1,14334 HBL1_DMSO_200M_050219_1,14334,HLEEDLKEVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14336 71.123 14.0 10405000.0 25 0 2885900.0 -1 0 51 1144.8080559618163 3431.402338485649 3 1145.142749011517 MULTI CID FTMS 0 0 0 14335 21962262.0 1.0 0 0.0 1 3 C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}GYW 6 -1 23.365 0.0 0.0 0.68091 0.0 0.0 1474.4989974389343 1077.5470675104127 2552.046064949347 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}GYW 0.68091 - 70 + 1 1.166 129998.4 1.0 8790 5544 14335 HBL1_DMSO_200M_050219_1,14336 HBL1_DMSO_200M_050219_1,14336, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14337 71.124 7.4 5229400.0 25 0 946650.0 + 25955 NLPDEIYHV 9 53 550.2740614993681 1098.5335700655362 2 550.2747070193291 MULTI CID FTMS 0 0 0 14335 6346971.5 0.6592339017463908 2 -0.12628173828125 2 Unmodified _NLPDEIYHV_ ENSG00000148335|ENST00000372483|NTMT1 36.04419817259434 0.0971720506436186 3 {[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}Y[HV] 9 0 + 63.606 0.0 0.0 5.7901 5.7901 90.904 0.0 0.0 0.0 33.640530381629645 5.509074688805811 5.509074688805811 37.74227503252014 0 0.3494850021680094 2.0 0.4247425010840047 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}Y[HV];[DP]E{I|L}YHV{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}[R{M(Oxidation (M))|F}][YC(Carbamidomethyl (C))]{[QV]|[N{I|L}]|[RA]|[KV]};{[WN]|[YH]}[PG]YHV{[QV]|[N{I|L}]|[RA]|[KV]} 5.7901;2.3544;1.537;1.1235 +;-;-;- + 107 + 1 1.166 36966.6 1.0 8791 5544 14335 HBL1_DMSO_200M_050219_1,14337 HBL1_DMSO_200M_050219_1,14337,NLPDEIYHV True True NLPDEIYHV 71.124264 550.274707019329 287323648.0 14335.0 ENSG00000148335|ENST00000372483|NTMT1 9.854260126749674 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14338 71.128 173.0 791290.0 25 0 37311.0 -1 MYFWKRFCFWK 11 108 857.9016964683636 1713.7888400035272 2 858.4039184451103 MULTI CID FTMS 0 0 0 14335 1139422.875 0.835651377776751 3 -0.1699295043945312 3 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 3 [MN]PN{I|L}NADQMT[QP]{I|L}Q 15 -1 + 90.644 0.0 0.0 5.2891 5.2891 76.38 0.0 0.0 0.0 43.582516785290025 14.775071725447404 14.775071725447404 1.7731749024395782 0 1.3539171939081172 1.5228787452803376 0.0 1.555462187404089 [MN]PN{I|L}NADQMT[QP]{I|L}Q;[MN]PN{I|L}NADQAA[WE]{I|L}Q;[MN]PN{I|L}NAD[RN][WE]{I|L}Q;[MN]PN{I|L}NWQMT[QP]{I|L}Q;[MN]PN{I|L}NWQAA[WE]{I|L}Q;[MN]{I|L}NPNADQMT[QP]{I|L}Q;[MN]{I|L}NPNADQAA[WE]{I|L}Q;[MN]{I|L}NPNAD[RN][WE]{I|L}Q;[MN]{I|L}NPNWQMT[QP]{I|L}Q;[MN]{I|L}NPNWQAA[WE]{I|L}Q 5.2891;5.1856;4.9709;4.8987;4.7953;4.3826;4.2791;4.0644;3.9922;3.8887 -;-;-;-;-;-;-;-;-;- 1705 + 1 1.166 93896.9 1.0 8792 5544 14335 HBL1_DMSO_200M_050219_1,14338 HBL1_DMSO_200M_050219_1,14338,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14339 71.131 189.0 717730.0 25 0 110800.0 -1 0 100 759.10069219608 2274.28024718844 3 759.4352294802666 MULTI CID FTMS 0 0 0 14335 868133.5 0.5593800020023111 -3 0.205322265625 4 3 {NN|[MP]|[D{I|L}]|[EV]}QKD{I|L}KVEN 10 -1 50.645 0.0 0.0 2.2268 0.0 0.0 0.0 1088.60613400813 1088.60613400813 18.04576644454536 0.0 0.0 0.0 0 0.0 1.154901959985743 0.6307196863200843 0.5242275032520141 {NN|[MP]|[D{I|L}]|[EV]}QKD{I|L}KVEN 2.2268 - 2269 1 1.166 107634.2 1.0 8793 5544 14335 HBL1_DMSO_200M_050219_1,14339 HBL1_DMSO_200M_050219_1,14339, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14340 71.133 85.0 1766100.0 25 0 287520.0 + 18938 LDAGVAPA 8 121 357.1943480772694 712.3741432213388 2 357.1943542361259 MULTI CID FTMS 0 0 0 14335 897671.25 1.0 0 0.0 5 Unmodified _LDAGVAPA_ REV__ENSG00000142207|ENST00000382751|URB1 20.871210003555333 0.6025813472596342 3 {I|L}DD{I|L}QG 6 -1 52.615 0.0 0.0 7.3858 0.0 0.0 0.0 68.05147730045155 68.05147730045155 31.58404038111344 0.0 0.0 0.0 0 0.2396518287104437 1.2218487496163564 0.4247425010840047 0.9674165578762486 {I|L}DD{I|L}QG 7.3858 - 240 + 1 1.166 121323.8 1.0 8794 5544 14335 HBL1_DMSO_200M_050219_1,14340 HBL1_DMSO_200M_050219_1,14340,LDAGVAPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14341 71.137 218.0 1084300.0 25 0 95238.0 + 35060 SQTSATFQL 9 194 491.7462432696678 981.4779336061356 2 491.7465698122978 MULTI CID FTMS 0 0 0 14335 705754.5 0.2966325952906434 -3 0.205322265625 6 Unmodified _SQTSATFQL_ ENSG00000159593|ENST00000290810|NAE1;ENST00000563221.5_1_16:66836914-66839833:-|nuORF;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-3|NAE1;nc|ENSG00000159593|Q13564-4|NAE1 34.40172386719151 0.1061884637610825 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}DTE 6 8 26.745 0.0 0.0 2.725 0.0 0.0 0.0 292.1525911591231 292.1525911591231 0.9960751996015738 0.0 0.0 0.0 0 0.0 1.0 0.75 0.7783773187068795 {NN|[MP]|[D{I|L}]|[EV]}{I|L}DTE 2.725 - 1612 1 1.166 179785.1 1.0 8795 5544 14335 HBL1_DMSO_200M_050219_1,14341 HBL1_DMSO_200M_050219_1,14341,SQTSATFQL True True SQTSATFQL 71.137339 491.746569812298 23159764.0 14335.0 ENST00000563221.5_1_16:66836914-66839833:-|nuORF;;nc|ENSG00000159593|Q13564-4|NAE1;;nc|ENSG00000159593|Q13564-3|NAE1;;nc|ENSG00000159593|Q13564-2|NAE1;;ENSG00000159593|ENST00000290810|NAE1 5.295618216196696 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14342 71.141 203.0 374880.0 25 0 20587.0 + 31998 RVIDFDENTAL 11 97 646.8276380098956 1291.6407230865912 2 646.8279907107353 MULTI CID FTMS 0 0 0 14335 676999.25 1.0 0 0.0 7 Unmodified _RVIDFDENTAL_ ENSG00000117906|ENST00000394885|RCN2;nc|ENSG00000117906|Q14257-2|RCN2 32.89776655970281 0.3218023389984559 3 [{I|L}V]RD{M(Oxidation (M))|F}DENTA{I|L} 11 2 + 84.369 0.0 0.0 6.5319 6.5319 82.398 0.0 0.0 0.0 10.497511950794632 68.0044464672697 10.497511950794632 3.0102999566398125 0 1.0 0.8860566476931632 0.5 0.4247425010840047 [{I|L}V]RD{M(Oxidation (M))|F}DENTA{I|L};[{I|L}V]RD{M(Oxidation (M))|F}DESQA{I|L};[{I|L}V]RD{M(Oxidation (M))|F}DTDQA{I|L};[{I|L}V]RD{M(Oxidation (M))|F}DEGGTA{I|L};[{I|L}V]RD{M(Oxidation (M))|F}DES[AG]A{I|L};[{I|L}V]RD{M(Oxidation (M))|F}DTD[AG]A{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]{M(Oxidation (M))|F}DENTA{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]{M(Oxidation (M))|F}DESQA{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]{M(Oxidation (M))|F}DTDQA{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]{M(Oxidation (M))|F}DEGGTA{I|L} 6.5319;6.2989;6.0658;5.8252;5.5921;5.3591;5.2203;4.9872;4.7542;4.5135 -;-;-;-;-;-;-;-;-;- 557 1 1.166 62041.7 1.0 8796 5544 14335 HBL1_DMSO_200M_050219_1,14342 HBL1_DMSO_200M_050219_1,14342,RVIDFDENTAL False True RVIDFDENTAL 71.141232 646.827990710735 4021093.75 14335.0 ENSG00000117906|ENST00000394885|RCN2;;nc|ENSG00000117906|Q14257-2|RCN2 7.157176494598389 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14343 71.145 207.0 350640.0 25 0 52824.0 -1 0 80 685.7354136594872 2054.1844115786616 3 686.0709716677666 MULTI CID FTMS 0 0 0 14335 685665.9375 0.7568454550384064 -3 0.205322265625 8 3 {NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L}KVDK 10 -1 35.301 0.0 0.0 1.7185 0.0 0.0 0.0 868.5010771450503 868.5010771450503 24.38424994129406 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L}KVDK 1.7185 - 416 1 1.166 63093.9 1.0 8797 5544 14335 HBL1_DMSO_200M_050219_1,14343 HBL1_DMSO_200M_050219_1,14343, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14344 71.149 223.0 646460.0 25 0 363790.0 + 35071 SQVDRLVAL 9 50 1000.5773073792436 999.5700309126436 1 1000.571826159954 MULTI CID FTMS 0 0 0 14335 616864.6875 0.4565453179454173 2 -0.12628173828125 9 Unmodified _SQVDRLVAL_ ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2;nc|ENSG00000063241|Q96AB3-3|ISOC2 21.53697664764585 0.2571576504437394 3 DKVNE{I|L} 6 7 49.245 0.0 0.0 4.9267 0.0 0.0 283.18977553535314 0.0 283.18977553535314 0.0 41.550697163554986 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.3807196863200844 DKVNE{I|L} 4.9267 - 292 1 1.166 103979.2 1.0 8798 5544 14335 HBL1_DMSO_200M_050219_1,14344 HBL1_DMSO_200M_050219_1,14344,SQVDRLVAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14345 71.151 89.0 751880.0 25 0 94791.0 + + 29752 VPQQALVI 8 84 434.2687401636614 866.5229273941228 2 434.2684509158134 MULTI CID FTMS 0 0 0 14335 579557.0 0.4254818364838468 -3 0.205322265625 10 Unmodified _QPQAVLLV_ ENSG00000105409|ENST00000648268|ATP1A3;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000163399|ENST00000295598|ATP1A1;ENSG00000132681|ENST00000368081|ATP1A4;nc|ENSG00000163399|P05023-2|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;nc|ENSG00000105409|P13637-3|ATP1A3;ENSG00000018625|ENST00000361216|ATP1A2;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000105409|P13637-2|ATP1A3 16.942295170755138 0.6606234159769251 3 [QP]QAV{I|L}V{I|L} 8 -1 + 33.805 0.0 0.0 3.9012 3.9012 71.868 0.0 0.0 0.0 2.430380486862944 10.172203223519531 2.430380486862944 1.7609125905568137 0 0.7429928190999391 0.0 0.0 0.0 [QP]QAV{I|L}V{I|L};[QP]QVA{I|L}V{I|L};QQPAV{I|L}V{I|L};[QP]QA{I|L}VV{I|L};QQPVA{I|L}V{I|L};QQPA{I|L}VV{I|L};[QP][AG]AV{I|L}V{I|L};[QP][AG]VA{I|L}V{I|L};[QP][AG]A{I|L}VV{I|L} 3.9012;3.698;3.6208;3.5538;3.4175;3.2734;2.8324;2.6291;2.485 -;-;-;-;-;-;-;-;- 118 1 1.166 55542.9 1.0 8799 5544 14335 HBL1_DMSO_200M_050219_1,14345 HBL1_DMSO_200M_050219_1,14345,QPQAVLLV False False VPQQALVI 71.151416 434.268450915813 19684272.0 14335.0 ENSG00000105409|ENST00000648268|ATP1A3;;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;;ENSG00000163399|ENST00000295598|ATP1A1;;ENSG00000132681|ENST00000368081|ATP1A4;;nc|ENSG00000163399|P05023-2|ATP1A1;;nc|ENSG00000163399|P05023-4|ATP1A1;;nc|ENSG00000105409|P13637-3|ATP1A3;;ENSG00000018625|ENST00000361216|ATP1A2;;nc|ENSG00000163399|P05023-3|ATP1A1;;nc|ENSG00000105409|P13637-2|ATP1A3 1.2020599246025083 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14346 71.156 229.0 755380.0 25 0 103010.0 -1 NWKRQLMTWKR 11 122 781.9238017423241 1561.8330505514482 2 782.4251586794853 MULTI CID FTMS 0 0 0 14335 533513.6875 1.0 0 0.0 11 Oxidation (M) _NWKRQLM(Oxidation (M))TWKR_ ENST00000344824.10_2_19:16204506-16212133:+|nuORF 2.9952420565917617 0.861016188266951 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KV{M(Oxidation (M))|F}{I|L} 10 -1 70.105 0.0 0.0 4.4886 0.0 0.0 0.0 359.1315479886861 359.1315479886861 9.56234741857144 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.1549471895720984 1.024227503252014 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KV{M(Oxidation (M))|F}{I|L} 4.4886 - 13169 1 1.166 121416.9 1.0 8800 5544 14335 HBL1_DMSO_200M_050219_1,14346 HBL1_DMSO_200M_050219_1,14346,NWKRQLMTWKR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14347 71.16 227.0 911070.0 25 0 77191.0 + 3368 AYQDRLAYL 9 177 556.7910787406794 1111.567604548159 2 556.7911254763603 MULTI CID FTMS 0 0 0 14335 518655.5 1.0 0 0.0 12 Unmodified _AYQDRLAYL_ ENSG00000140575|ENST00000268182|IQGAP1;ENST00000558003.1_1_15:91016937-91017036:+|nuORF 49.55428908609986 0.0413471690215031 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEVRAY{I|L} 9 3 + 50.729 0.0 0.0 4.5637 4.5637 81.392 0.0 0.0 0.0 8.157978556393815 8.157978556393815 8.157978556393815 8.157978556393815 0 1.4291746928241125 2.0 0.0 0.2614393726401688 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEVRAY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q{[QV]|[N{I|L}]|[RA]|[KV]}{NN|[MP]|[D{I|L}]|[EV]}Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEV[VG]AY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QDVVAAY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[RN]NAY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEAA{I|L}AY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KC]VRAY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[HS]TV[QP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}KVT[CS]AY{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RAY{I|L} 4.5637;3.8298;3.7353;3.5068;3.3483;3.1937;2.9485;2.8293;2.786;2.7399 -;-;-;-;-;-;-;-;-;- 2238 1 1.166 160133.4 1.0 8801 5544 14335 HBL1_DMSO_200M_050219_1,14347 HBL1_DMSO_200M_050219_1,14347,AYQDRLAYL True True AYQDRLAYL 71.16002 556.79112547636 3854876.0 14335.0 ENSG00000140575|ENST00000268182|IQGAP1;;ENST00000558003.1_1_15:91016937-91017036:+|nuORF 2.6198184291521707 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14348 71.165 251.0 1024000.0 25 0 68549.0 + 12222 GQVAYLEKL 9 226 510.7907884212769 1019.5670239093538 2 510.7907592654228 MULTI CID FTMS 0 0 0 14335 468119.96875 1.0 0 0.0 13 Unmodified _GQVAYLEKL_ ENSG00000128833|ENST00000261839|MYO5C;ENSG00000167306|ENST00000285039|MYO5B;ENSG00000197535|ENST00000399233|MYO5A;ENST00000558902.5_1_15:52529812-52548856:-|nuORF;ENST00000560809.5_1_15:52532054-52548856:-|nuORF;nc|ENSG00000197535|Q9Y4I1-2|MYO5A;nc|ENSG00000197535|Q9Y4I1|MYO5A 37.77132515983256 0.0876909340306915 3 NAVAY{I|L}EK{I|L} 9 2 + 71.014 0.0 0.0 6.9651 6.9651 89.304 0.0 0.0 0.0 10.347621062592111 8.38849090737255 8.38849090737255 8.38849090737255 0 1.1421590589602533 0.5228787452803376 0.4247425010840047 0.1803115997617927 NAVAY{I|L}EK{I|L};NAVAY{I|L}E{I|L}K;NAVAY{I|L}{[VA]|[{I|L}G]}S{I|L};NAVAY{I|L}{[VA]|[{I|L}G]}TV;NAVAY{I|L}{[VA]|[{I|L}G]}VT;NAVAY{I|L}{[VA]|[{I|L}G]}{I|L}S;NAVAY{I|L}{[SA]|[TG]}V{I|L};NAVAY{I|L}{[TV]|[{I|L}S]}G{I|L};NAVAY{I|L}{[SA]|[TG]}{I|L}V;NAVAY{I|L}{[TV]|[{I|L}S]}AV 6.9651;6.1424;5.9089;5.8312;5.5147;5.3184;4.5685;4.5496;4.4908;4.4719 -;-;-;-;-;-;-;-;-;- 4678 + 1 1.166 194091.5 1.0 8802 5544 14335 HBL1_DMSO_200M_050219_1,14348 HBL1_DMSO_200M_050219_1,14348,GQVAYLEKL True True GQVAYLEKL 71.164678 510.790759265423 3286597.5 14335.0 ENST00000560809.5_1_15:52532054-52548856:-|nuORF;;ENSG00000167306|ENST00000285039|MYO5B;;nc|ENSG00000197535|Q9Y4I1|MYO5A;;ENSG00000197535|ENST00000399233|MYO5A;;nc|ENSG00000197535|Q9Y4I1-2|MYO5A;;ENSG00000128833|ENST00000261839|MYO5C;;ENST00000558902.5_1_15:52529812-52548856:-|nuORF 6.2474056879679365 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14349 71.17 294.0 515490.0 25 0 111460.0 16439 KAGARRPS 8 132 421.7512185072943 841.4878840813886 2 421.7513000369072 MULTI CID FTMS 0 0 0 14335 447869.96875 0.7778163651101915 -3 0.205322265625 14 Unmodified _KAGARRPS_ ENSG00000173805|ENST00000347901|HAP1;nc|ENSG00000173805|P54257-3|HAP1;nc|ENSG00000173805|P54257-4|HAP1;nc|ENSG00000173805|P54257|HAP1 4.75600775471527 0.7954636275367004 3 {I|L}DD{I|L}QG 6 8 29.544 0.0 0.0 3.5109 0.0 0.0 129.1110236478708 68.05146967105702 197.16249331892783 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7059771852360797 {I|L}DD{I|L}QG 3.5109 - 178 + 1 1.166 122361.1 1.0 8803 5544 14335 HBL1_DMSO_200M_050219_1,14349 HBL1_DMSO_200M_050219_1,14349,KAGARRPS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14350 71.175 298.0 506930.0 25 0 33888.0 + 17118 KLGDIMGV 8 144 416.73324362699145 0 416.7332031130791 PEAK CID FTMS 0 0 0 14335 428967.8125 1.0 0 0.0 15 Unmodified _KLGDIMGV_ ENSG00000140829|ENST00000268482|DHX38;ENST00000566329.1_1_16:72134993-72137705:+|nuORF 39.957323273325 0.1410752012386504 3 M{I|L}DG{I|L}G 6 5 24.245 0.0 0.0 2.916 0.0 0.0 174.10001889285166 68.05146967105702 242.15148856390869 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.3807196863200844 0.0 M{I|L}DG{I|L}G 2.916 - 299 + 1 1.166 123397.5 1.0 8804 5544 14335 HBL1_DMSO_200M_050219_1,14350 HBL1_DMSO_200M_050219_1,14350,KLGDIMGV False True KLGDIMGV 71.175497 416.733203113079 2772856.0 14335.0 ENSG00000140829|ENST00000268482|DHX38;;ENST00000566329.1_1_16:72134993-72137705:+|nuORF 5.389455954233806 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14351 71.182 285.0 2827000.0 25 0 452830.0 + 18326 KVLEPNIQ 8 223 470.7776078490462 939.5406627648924 2 470.7775451540947 MULTI CID FTMS 0 0 0 14335 392357.6875 1.0 0 0.0 16 Unmodified _KVLEPNIQ_ ENSG00000166860|ENST00000300101|ZBTB39 68.08070601005525 0.1147890174299629 3 KV{I|L}DD{I|L}QG 8 4 84.815 0.0 0.0 9.0273 0.0 0.0 0.0 68.05143152408436 68.05143152408436 45.16485485714459 0.0 0.0 0.0 0 1.6861818737241734 0.638272163982407 1.079689690656103 1.91944517631652 KV{I|L}DD{I|L}QG 9.0273 - 6020 + 1 1.166 606013.1 1.0 8805 5544 14335 HBL1_DMSO_200M_050219_1,14351 HBL1_DMSO_200M_050219_1,14351,KVLEPNIQ True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14352 71.186 213.0 460380.0 25 0 80845.0 + 9154 FFYNEHTNDF 10 101 667.2778855103292 1332.5412180874582 2 667.2782470583916 MULTI CID FTMS 0 0 0 14335 314253.40625 0.625194531870152 -2 0.1747283935546875 17 Unmodified _FFYNEHTNDF_ ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A 38.17557092003332 0.1768326257063233 3 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 2 8 37.435 0.0 0.0 2.8093 0.0 0.0 0.0 1035.3829333999292 1035.3829333999292 16.288624837399297 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 + {M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.8093 + + 209 + 1 1.166 75180.0 1.0 8806 5544 14335 HBL1_DMSO_200M_050219_1,14352 HBL1_DMSO_200M_050219_1,14352,FFYNEHTNDF False True FFYNEHTNDF 71.185955 667.278247058392 3563485.0 14335.0 ENSG00000038532|ENST00000409790|CLEC16A;;nc|ENSG00000038532|Q2KHT3-2|CLEC16A 3.9766105016072593 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14354 71.19 0.2 154740000.0 25 0 19455000.0 + 17808 KQLDDLKVEL 10 60 600.8452342256743 1199.6759155181485 2 600.8463012576103 MULTI CID FTMS 0 0 0 14353 228018960.0 0.6785837815105724 -1 0.0669479370117187 1 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 27.22323531849824 0.3570408936368626 3 {NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KV{M(Oxidation (M))|F} 9 6 45.423 0.0 0.0 3.7863 0.0 0.0 0.0 110.05820267012555 110.05820267012555 32.63682493045401 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KV{M(Oxidation (M))|F} 3.7863 - 87 1 1.166 28554.3 1.0 8807 5545 14353 HBL1_DMSO_200M_050219_1,14354 HBL1_DMSO_200M_050219_1,14354,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14355 71.191 0.4 149020000.0 25 0 22786000.0 + 17817 KQLDDLKVEL 10 94 400.8994160702367 1199.67641881091 3 400.8997070193291 MULTI CID FTMS 0 0 0 14353 137335312.0 0.6645170430682129 1 -0.0593338012695312 2 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 59.36838082759317 0.0382430275470746 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K 7 7 61.573 0.0 0.0 5.1324 0.0 0.0 0.0 356.17834687171006 356.17834687171006 47.59327598502338 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 0.7742275032520141 0.7059771852360797 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K 5.1324 - 406 1 1.166 52592.1 1.0 8808 5545 14353 HBL1_DMSO_200M_050219_1,14355 HBL1_DMSO_200M_050219_1,14355,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14356 71.192 6.8 6698600.0 25 0 579340.0 + 26118 NPREWTPEI 9 60 571.2863532668998 1140.5581536005996 2 571.2858764529228 MULTI CID FTMS 0 0 0 14353 8694729.0 0.9076883968856808 1 -0.0593338012695312 3 Unmodified _NPREWTPEI_ ENSG00000134759|ENST00000358232|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 45.69961567697781 0.0497987121815769 3 [EP][RN]WTPE{I|L} 9 2 + 62.183 0.0 0.0 5.452 5.452 90.112 0.0 0.0 0.0 20.355443491087826 34.735834254131106 20.355443491087826 50.80530004019302 0 1.1549471895720984 1.6989700043360187 0.4247425010840047 0.3252574989159953 [EP][RN]WTPE{I|L};{[QN]|[E{I|L}]|[KN]}V[Y{M(Oxidation (M))|F}]N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L} 5.452;0.99757 -;- 112 1 1.166 42555.4 1.0 8809 5545 14353 HBL1_DMSO_200M_050219_1,14356 HBL1_DMSO_200M_050219_1,14356,NPREWTPEI True True NPREWTPEI 71.192359 571.285876452923 310781472.0 14353.0 nc|ENSG00000134759|Q6IA86-7|ELP2;;nc|ENSG00000134759|Q6IA86-3|ELP2;;nc|ENSG00000134759|Q6IA86-4|ELP2;;ENSG00000134759|ENST00000358232|ELP2;;nc|ENSG00000134759|Q6IA86-6|ELP2 6.544456322987874 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14357 71.194 11.0 4791700.0 25 0 737060.0 18147 KTPKLERGD 9 81 522.2960028201737 1042.5774527071474 2 522.2958251833916 MULTI CID FTMS 0 0 0 14353 5530992.0 0.7962957724062169 -2 0.1250839233398437 4 Unmodified _KTPKLERGD_ ANKRD11|p.T410Nfs*28|1|0.26|ENSG00000167522|chr16:89285313-89285314|-/T|frameshift_variant;ENSG00000167522|ENST00000301030|ANKRD11;ENST00000378332.6_1_16:89358120-89379742:-|nuORF;ENST00000567699.1_1_16:89368006-89383442:-|nuORF 3.5964929083625545 0.7891324200061827 3 {I|L} 1 8 10.485 0.0 0.0 1.0056 0.0 0.0 911.4822206288256 0.0 911.4822206288256 0.0 8.89075625191822 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0056 + + 4 + 1 1.166 45432.9 1.0 8810 5545 14353 HBL1_DMSO_200M_050219_1,14357 HBL1_DMSO_200M_050219_1,14357,KTPKLERGD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14358 71.195 35.0 2385000.0 25 0 304200.0 + 40580 VKPSVPLF 8 88 443.7734510303929 885.5323491275858 2 443.7734557986259 MULTI CID FTMS 0 0 0 14353 3581283.0 0.209548930226364 29 -2.276817321777344 5 Unmodified _VKPSVPLF_ REV__ENSG00000165792|ENST00000339374|METTL17;REV__ENST00000555902.6_1_14:21458708-21463066:+|nuORF;REV__nc|ENSG00000165792|Q9H7H0-2|METTL17;REV__nc|ENSG00000165792|Q9H7H0-3|METTL17 32.30548876998284 0.3644845974844379 3 {I|L}PYV 4 -1 51.23 0.0 0.0 5.7852 0.0 0.0 0.0 410.23984705142817 410.23984705142817 20.154856465551987 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PYV 5.7852 - 429 + 1 1.166 69171.2 1.0 8811 5545 14353 HBL1_DMSO_200M_050219_1,14358 HBL1_DMSO_200M_050219_1,14358,VKPSVPLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14359 71.196 23.0 3260200.0 25 0 601920.0 + 3710 DAFPNIEKV 9 97 516.7710503184005 1031.527547703601 2 516.7723266482353 MULTI CID FTMS 0 0 0 14353 1922851.0 0.3451325892873169 1 -0.0593338012695312 6 Unmodified _DAFPNIEKV_ ENSG00000129968|ENST00000292577|ABHD17A;ENST00000458502.2_1_17:20744816-20747364:+|nuORF;nc|ENSG00000129968|Q96GS6-2|ABHD17A 30.43146612281011 0.143988730116972 3 {[DA]|[EG]}{M(Oxidation (M))|F}PN{I|L}EKV 9 0 + 66.397 0.0 0.0 6.4368 6.4368 89.134 0.0 0.0 0.0 36.15381386212464 8.416375079047498 8.416375079047498 9.208187539523747 0 1.2302046884880935 1.5228787452803376 0.3494850021680094 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}PN{I|L}EKV;{[DA]|[EG]}{M(Oxidation (M))|F}PGG{I|L}EKV;{[DA]|[EG]}{M(Oxidation (M))|F}V[QP]EKV;{[DA]|[EG]}{M(Oxidation (M))|F}PN{I|L}[VS]G{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}PN{I|L}[VS]AV;{[DA]|[EG]}{M(Oxidation (M))|F}PGG{I|L}[VS]G{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}V[QP][VS]G{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}PGG{I|L}[VS]AV;{[DA]|[EG]}{M(Oxidation (M))|F}V[QP][VS]AV;{[DA]|[EG]}{M(Oxidation (M))|F}P[KS][TP]G{I|L} 6.4368;5.5441;5.3226;5.1886;4.8967;4.3001;4.0744;4.0083;3.7826;3.1088 +;-;-;-;-;-;-;-;-;- + 321 + 1 1.166 64153.7 1.0 8812 5545 14353 HBL1_DMSO_200M_050219_1,14359 HBL1_DMSO_200M_050219_1,14359,DAFPNIEKV False True DAFPNIEKV 71.195895 516.772326648235 41434964.0 14353.0 ENSG00000129968|ENST00000292577|ABHD17A;;ENST00000458502.2_1_17:20744816-20747364:+|nuORF;;nc|ENSG00000129968|Q96GS6-2|ABHD17A 7.26878563563029 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14360 71.199 130.0 1904500.0 25 0 186670.0 + 44430 YMIDPSGVSY 10 172 566.2550379169405 1130.495522900681 2 566.2547485232353 MULTI CID FTMS 0 0 0 14353 1426868.0 0.0710957379966885 -7 0.5914306640625 7 Unmodified _YMIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 61.357469665136826 0.0330252915653943 3 [PS]GDVYM{I|L}SY 10 7 + 43.958 0.0 0.0 3.8884 3.8884 72.669 0.0 0.0 0.0 5.265560141665546 8.010299956639813 5.265560141665546 2.251649203416733 0 0.8935078169319297 0.6989700043360187 0.6641478515490357 0.0 [PS]GDVYM{I|L}SY;[PS]GVYDM{I|L}SY;[PS]GVDYM{I|L}SY;[PS]GVYMEVSY;[PS]GYVDM{I|L}SY;[VG]SPYDM{I|L}SY;[VG]SPDYM{I|L}SY;[VG]SYPDM{I|L}SY;[PS]GYVMEVSY;[VG]SPYMEVSY 3.8884;3.6892;3.633;3.5763;3.423;3.4226;3.3664;3.3121;3.3101;3.3097 -;-;-;-;-;-;-;-;-;- 4106 1 1.166 189526.4 1.0 8813 5545 14353 HBL1_DMSO_200M_050219_1,14360 HBL1_DMSO_200M_050219_1,14360,YMIDPSGVSY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14361 71.2 41.0 3551900.0 25 0 97847.0 -1 0 128 873.9146498260742 1745.8147467189483 2 873.9148437380791 MULTI CID FTMS 0 0 0 14353 1419277.5 1.0 0 0.0 8 3 [MN]PN{I|L}NEAQ[RH]DA 13 -1 75.84 0.0 0.0 4.3441 0.0 0.0 0.0 252.13590048187584 252.13590048187584 28.84126316218112 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.3252574989159953 0.6989700043360187 [MN]PN{I|L}NEAQ[RH]DA 4.3441 - 24189 + 1 1.166 98059.3 1.0 8814 5545 14353 HBL1_DMSO_200M_050219_1,14361 HBL1_DMSO_200M_050219_1,14361, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14362 71.203 175.0 756250.0 25 0 80834.0 19505 LFLPQKPFFT 10 131 413.238171359864 0 413.2379028201103 PEAK CID FTMS 0 0 0 14353 954289.9375 0.8897803089858339 1 -0.0593338012695312 9 Unmodified _LFLPQKPFFT_ ENSG00000119688|ENST00000356924|ABCD4;ENST00000553745.5_1_14:74753379-74769587:-|nuORF 3.2813086475875832 0.3961065659209837 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.166 104990.5 1.0 8815 5545 14353 HBL1_DMSO_200M_050219_1,14362 HBL1_DMSO_200M_050219_1,14362,LFLPQKPFFT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14363 71.207 182.0 518840.0 25 0 66801.0 + -1 AQLPEQVTL 9 68 998.4025948827276 2992.1859552483825 3 999.0705444216728 MULTI CID FTMS 0 0 0 14353 891846.8125 0.723346206970946 -2 0.1250839233398437 10 ENSG00000100060|ENST00000356998|MFNG;nc|ENSG00000100060|O00587-2|MFNG 3 [EP]QVT{I|L}VT{I|L} 9 -1 45.671 0.0 0.0 1.5263 0.0 0.0 0.0 2008.6224536216823 2008.6224536216823 37.0872875024979 0.0 0.0 0.0 0 0.0 0.0 1.336696871556164 0.3252574989159953 [EP]QVT{I|L}VT{I|L} 1.5263 - 516 1 1.166 81511.1 1.0 8816 5545 14353 HBL1_DMSO_200M_050219_1,14363 HBL1_DMSO_200M_050219_1,14363, False False AQLPEQVTL 71.206715 998.4025 9223487.0 14353.0 ENSG00000100060|ENST00000356998|MFNG;;nc|ENSG00000100060|O00587-2|MFNG 4.143846352895101 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14364 71.21 168.0 1572300.0 25 0 129390.0 5338 DLGQLTYML 9 211 527.2677912746994 1052.5210296161988 2 527.2670165896416 MULTI CID FTMS 0 0 0 14353 854162.0 0.0245535013608798 11 -0.8190765380859375 11 Unmodified _DLGQLTYML_ ENSG00000139364|ENST00000682704|TMEM132B;nc|ENSG00000139364|Q14DG7-3|TMEM132B;nc|ENSG00000139364|Q14DG7|TMEM132B 27.628801355627647 0.1796483985696185 3 MVAQP{I|L}EV 8 8 62.967 0.0 0.0 5.9825 0.0 0.0 0.0 182.05764185123283 182.05764185123283 18.922624445434927 0.0 0.0 0.0 0 0.6421590589602533 2.0 0.6382104921644451 0.0 MVAQP{I|L}EV 5.9825 - 8329 + 1 1.166 202817.3 1.0 8817 5545 14353 HBL1_DMSO_200M_050219_1,14364 HBL1_DMSO_200M_050219_1,14364,DLGQLTYML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14365 71.213 176.0 548320.0 25 0 60973.0 + 35747 SVIEDKTIEL 10 117 573.816498677866 1145.618444422532 2 573.8166381716728 MULTI CID FTMS 0 0 0 14353 686865.125 0.8103072863598549 1 -0.0593338012695312 12 Unmodified _SVIEDKTIEL_ ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11 57.24910588100465 0.0438022649904578 3 [VS]GE{I|L}T{I|L}{M(Oxidation (M))|F}[PA]{I|L} 11 6 + 88.333 0.0 0.0 7.7105 7.7105 82.75 0.0 0.0 0.0 4.602906605065158 4.602906605065158 4.602906605065158 1.2763625255165325 0 0.8807196863200843 2.0 1.7544321917401078 0.0 [VS]GE{I|L}T{I|L}{M(Oxidation (M))|F}[PA]{I|L};[VS]GET{I|L}{I|L}{M(Oxidation (M))|F}[PA]{I|L};[VS]{I|L}{M(Oxidation (M))|F}{I|L}T{I|L}E[QP];[VS]{I|L}{M(Oxidation (M))|F}{I|L}T[QP]E{I|L};[VS]GE{I|L}T{I|L}{M(Oxidation (M))|F}{I|L}[PA];[VS]{I|L}{M(Oxidation (M))|F}{I|L}TA[PG]E{I|L};[VS]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}TE[QP];[VS]GET{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[PA];{[QN]|[E{I|L}]|[KN]}DKT{I|L}{M(Oxidation (M))|F}{I|L}[PA];[VS]{I|L}{M(Oxidation (M))|F}{I|L}TAD[PA]{I|L} 7.7105;7.5991;7.3088;7.3052;7.2741;7.1999;7.1973;7.1627;7.024;6.8876 -;-;-;-;-;-;-;-;-;- 3389 1 1.166 77991.3 1.0 8818 5545 14353 HBL1_DMSO_200M_050219_1,14365 HBL1_DMSO_200M_050219_1,14365,SVIEDKTIEL True True SVIEDKTIEL 71.213438 573.816638171673 4940789.5 14353.0 nc|ENSG00000072803|Q9UKB1-2|FBXW11;;nc|ENSG00000072803|Q9UKB1-3|FBXW11;;nc|ENSG00000072803|Q9UKB1|FBXW11;;ENSG00000072803|ENST00000517395|FBXW11 4.91165033976237 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14366 71.217 186.0 1289800.0 25 0 93228.0 + 167 AAMEDLTRL 9 189 510.2632440693411 1018.5119352054822 2 510.2630493044853 MULTI CID FTMS 0 0 0 14353 669307.0625 0.1066389685238322 -4 0.2722702026367187 13 Unmodified _AAMEDLTRL_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000523646.1_1_8:109240494-109241379:-|nuORF 55.50274090549119 0.0285720310785888 3 AAME{I|L}DTR{I|L} 9 2 + 90.287 0.0 0.0 8.8646 8.8646 82.33 0.0 0.0 0.0 31.96272488392667 8.280101553050912 8.280101553050912 0.0443219174010778 0 0.8778623208748889 1.6989700043360187 1.360924374808178 0.0 AAME{I|L}DTR{I|L};AAMED{I|L}TR{I|L};AAM{I|L}EDTR{I|L};AAME{I|L}VWTV;AAME{I|L}VWS{I|L};AAME{I|L}DRT{I|L};AAMED{I|L}RT{I|L};AAME{I|L}VW{I|L}S;AAM{I|L}EVWTV;AAM{I|L}EVWS{I|L} 8.8646;8.8603;8.1121;8.0517;8.011;7.916;7.9117;7.661;7.2991;7.2585 -;+;-;-;-;-;-;-;-;- + 2660 + 1 1.166 180695.2 1.0 8819 5545 14353 HBL1_DMSO_200M_050219_1,14366 HBL1_DMSO_200M_050219_1,14366,AAMEDLTRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14367 71.22 177.0 1369700.0 25 0 179320.0 42229 VSLDRYLKI 9 215 553.8305305936672 1105.6465082541342 2 553.8311035037041 MULTI CID FTMS 0 0 0 14353 670738.0 0.3170107490189387 -2 0.1250839233398437 14 Unmodified _VSLDRYLKI_ ENSG00000124818|ENST00000371211|OPN5 13.042465956692816 0.4836390050082244 3 {M(Oxidation (M))|F}CP{I|L}VER{I|L} 8 8 21.164 0.0 0.0 1.9142 0.0 0.0 130.14390721538115 0.0 130.14390721538115 0.0 12.015594539084624 0.0 0.0 0 0.218765315847925 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}CP{I|L}VER{I|L} 1.9142 - 1389 + 1 1.166 181600.7 1.0 8820 5545 14353 HBL1_DMSO_200M_050219_1,14367 HBL1_DMSO_200M_050219_1,14367,VSLDRYLKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14368 71.224 200.0 1264400.0 25 0 84260.0 -1 0 173 459.2283951475518 1832.8844747238072 4 459.2286559939384 MULTI CID FTMS 0 0 0 14353 659564.75 0.5595120380303589 -4 0.2722702026367187 15 3 [YT]{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}HSGS[QA]VK 16 -1 + 93.695 0.0 0.0 5.1119 5.1119 55.995 0.0 0.0 0.0 50.22772703409 6.15987537940164 6.15987537940164 0.0 0 0.0 2.0 1.524227503252014 0.3252574989159953 [YT]{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}HSGS[QA]VK;[YT]{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SHGS[QA]VK;[YT]{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SHGS{I|L}{[QG]|[NA]}K;[YT]{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}HSGS{I|L}{[QG]|[NA]}K;[YT]{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}HSGS[DV]V{I|L};[YT]{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SHGS[DV]V{I|L};[YT]{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}H[KC][QA]VK;[YT]{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}H[KC]{I|L}{[QG]|[NA]}K;[YT]{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}S{[YC]|[HE]}[{I|L}T]VK;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}SGHS{I|L}D{M(Oxidation (M))|F}HP{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V] 5.1119;5.1119;5.0364;5.0364;4.342;4.342;4.0791;4.0037;3.9465;3.7678 -;-;-;-;-;-;-;-;-;- 6417 + 1 1.166 204517.1 1.0 8821 5545 14353 HBL1_DMSO_200M_050219_1,14368 HBL1_DMSO_200M_050219_1,14368, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14369 71.228 196.0 2260700.0 25 0 211030.0 + 42991 VVVDPIQSV 9 249 478.2765603017722 954.5385676703444 2 478.2767516970634 MULTI CID FTMS 0 0 0 14353 698250.0 0.1448618843331016 4 -0.2122116088867187 16 Unmodified _VVVDPIQSV_ ENSG00000115233|ENST00000409682|PSMD14 61.357469665136826 0.0253304979873734 3 VVDVWAV 7 5 29.032 0.0 0.0 3.0415 0.0 0.0 0.0 183.10165295770688 183.10165295770688 5.131288188505678 0.0 0.0 0.0 0 0.4489700043360188 1.6989700043360187 0.2614393726401688 0.0 VVDVWAV 3.0415 - 3282 1 1.166 332625.5 1.0 8822 5545 14353 HBL1_DMSO_200M_050219_1,14369 HBL1_DMSO_200M_050219_1,14369,VVVDPIQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14370 71.232 224.0 551320.0 25 0 146090.0 -1 0 60 1066.095663410906 3195.265160832919 3 1066.428271472454 MULTI CID FTMS 0 0 0 14353 537753.875 0.0354955700329646 9 -0.6505584716796875 17 3 E 1 -1 6.9897 0.0 0.0 0.21875 0.0 0.0 2539.0359541934185 524.1621187799436 3063.1980729733623 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21875 - 25 + 1 1.166 114394.6 1.0 8823 5545 14353 HBL1_DMSO_200M_050219_1,14370 HBL1_DMSO_200M_050219_1,14370, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14371 71.236 195.0 1202100.0 25 0 101470.0 + 25587 NFIATVREV 9 192 524.7913879628207 1047.5682229924414 2 524.7928954958916 MULTI CID FTMS 0 0 0 14353 576709.6875 0.2843338127410789 2 -0.1029815673828125 18 Unmodified _NFIATVREV_ ENSG00000140382|ENST00000336216|HMG20A 51.629811660486645 0.0367964933207742 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}ATV[RD]{I|L} 9 2 + 51.02 0.0 0.0 4.8703 4.8703 79.865 0.0 0.0 0.0 7.147642715192504 5.228787452803374 5.228787452803374 5.228787452803374 0 0.9247425010840048 0.0 0.6989700043360187 0.5451140161145328 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}ATV[RD]{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}ATV{[RE]|[WV]}V;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AVT[RD]{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VAT[RD]{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AVT{[RE]|[WV]}V;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AV{[RE]|[WV]}S{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AV[RD]T{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AT{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[TV]|[{I|L}S]}V{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 4.8703;4.3712;4.0668;3.8847;3.7307;3.5677;3.4316;3.3247;3.3198;3.2785 -;+;-;-;-;-;-;-;-;- + 3870 + 1 1.166 181602.0 1.0 8824 5545 14353 HBL1_DMSO_200M_050219_1,14371 HBL1_DMSO_200M_050219_1,14371,NFIATVREV True True NFIATVREV 71.236042 524.792895495892 47952756.0 14353.0 ENSG00000140382|ENST00000336216|HMG20A 5.355974992116292 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14372 71.24 193.0 985120.0 25 0 60670.0 + 3987 DALRPPLQNI 10 172 568.8250783070122 1135.6356036808245 2 568.8239623904228 MULTI CID FTMS 0 0 0 14353 512736.53125 0.0671351342017812 -12 0.9627456665039062 19 Unmodified _DALRPPLQNI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 69.33821966488729 0.0189579340102328 3 {[DA]|[EG]}{I|L}GVK{[HG]|PP}{I|L}N{I|L} 11 4 + 83.338 0.0 0.0 7.3384 7.3384 86.328 0.0 0.0 0.0 4.159350048786564 4.159350048786564 4.159350048786564 4.159350048786564 0 2.7416440611282624 2.0 0.0 1.6861818737241734 {[DA]|[EG]}{I|L}GVK{[HG]|PP}{I|L}N{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]GAN{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]QN{I|L};{[DA]|[EG]}G{I|L}VPKRP[PS];{[DA]|[EG]}{I|L}GVK[HV]AN{I|L};{[DA]|[EG]}{I|L}RP[PG]{I|L}AN{I|L};{[DA]|[EG]}{I|L}GVPKRP[PS];{[DA]|[EG]}{I|L}GVK{[HG]|PP}{I|L}QV;{[DA]|[EG]}{I|L}RPKVGP[PS];{[DA]|[EG]}{I|L}G{[HG]|PP}{I|L}RAN{I|L} 7.3384;6.9721;6.8132;6.5817;6.5034;6.3567;6.3189;6.3175;6.3051;6.2192 -;-;+;-;-;-;-;-;-;- + 4709 + 1 1.166 146273.0 1.0 8825 5545 14353 HBL1_DMSO_200M_050219_1,14372 HBL1_DMSO_200M_050219_1,14372,DALRPPLQNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14373 71.245 231.0 354850.0 25 0 43078.0 -1 0 70 1057.049121081829 0 1057.049121081829 PEAK CID FTMS 0 0 0 -1 0 20 3 MEQ{I|L}EQ{I|L} 7 -1 28.545 0.0 0.0 1.3515 0.0 0.0 1055.5896229236207 182.0577181451781 1237.6473410687988 0.0 0.0 0.0 0.0 0 0.5 0.0 1.075257498915995 0.75 MEQ{I|L}EQ{I|L} 1.3515 - 664 + 1 1.166 58942.6 1.0 8826 5545 14353 HBL1_DMSO_200M_050219_1,14373 HBL1_DMSO_200M_050219_1,14373, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14375 71.249 4.7 9975800.0 25 0 2261500.0 31786 RSPRGILG 8 65 428.2616896519712 854.5088263707423 2 428.2616760134697 MULTI CID FTMS 0 0 0 14374 11245769.0 0.7393137678290137 -1 0.0593338012695312 1 Unmodified _RSPRGILG_ ENST00000298310.9_1_14:50319457-50319715:-|nuORF 0.0 0.8243325171867699 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.141 44267.9 1.0 8827 5546 14374 HBL1_DMSO_200M_050219_1,14375 HBL1_DMSO_200M_050219_1,14375,RSPRGILG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14376 71.251 74.0 702660.0 25 0 99531.0 -1 0 68 905.9401266512108 1809.8657003692217 2 906.4420043826104 MULTI CID FTMS 0 0 0 14374 716160.6875 0.0550925510659132 3 -0.1528778076171875 2 3 [VP]EHH{I|L}KVEN 10 -1 44.416 0.0 0.0 2.4541 0.0 0.0 0.0 624.1911757082695 624.1911757082695 33.95828234534207 0.0 0.0 0.0 0 0.0 1.154901959985743 0.6747425010840047 0.0 [VP]EHH{I|L}KVEN 2.4541 - 393 1 1.141 39484.8 1.0 8828 5546 14374 HBL1_DMSO_200M_050219_1,14376 HBL1_DMSO_200M_050219_1,14376, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14377 71.252 7.0 1962500.0 25 0 231850.0 + 45239 YRSVFNTSHK 10 34 413.5482281780126 0 413.5482360720634 PEAK CID FTMS 0 0 0 14374 7638517.0 1.0 0 0.0 3 Unmodified _YRSVFNTSHK_ REV__ENSG00000197705|ENST00000359358|KLHL14 2.735195868890462 0.3961065659209837 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.141 18911.2 1.0 8829 5546 14374 HBL1_DMSO_200M_050219_1,14377 HBL1_DMSO_200M_050219_1,14377,YRSVFNTSHK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14378 71.253 8.9 4828300.0 25 0 1106500.0 + 12585 GVIGGDNIRL 10 46 507.2903971021708 1012.5662412711416 2 507.2905761599541 MULTI CID FTMS 0 0 0 14374 5783815.5 0.6843202834671867 -1 0.0593338012695312 4 Unmodified _GVIGGDNIRL_ ENSG00000108506|ENST00000251334|INTS2;nc|ENSG00000108506|Q9H0H0|INTS2 28.49450938151212 0.328477364964909 3 [VG]{I|L}GGDN{I|L}[R{I|L}] 10 0 + 68.193 0.0 0.0 6.7346 6.7346 87.237 0.0 0.0 0.0 65.09372828088694 5.764837301042718 5.764837301042718 6.53212513775344 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + + [VG]{I|L}GGDN{I|L}[R{I|L}];[VG]{I|L}NDN{I|L}[R{I|L}];[VG]{I|L}GGDGG{I|L}[R{I|L}];[VG]{I|L}NDGG{I|L}[R{I|L}];[VG]AA{[CP]|[EA]}N{I|L}[R{I|L}] 6.7346;6.0895;5.8296;5.1801;3.1544 +;-;-;-;- + 78 + 1 1.141 40114.0 1.0 8830 5546 14374 HBL1_DMSO_200M_050219_1,14378 HBL1_DMSO_200M_050219_1,14378,GVIGGDNIRL False True GVIGGDNIRL 71.25343 507.290576159954 109691416.0 14374.0 ENSG00000108506|ENST00000251334|INTS2;;nc|ENSG00000108506|Q9H0H0|INTS2 5.276304562886556 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14379 71.255 10.0 19540000.0 25 0 2262100.0 + 17076 KLDQNIIPE 9 135 535.2973366357057 1068.5801203382114 2 535.2982055544853 MULTI CID FTMS 0 0 0 14374 5057307.5 0.7227573180088182 2 -0.0929412841796875 5 Unmodified _KLDQNIIPE_ nc|ENSG00000180881|Q9BXY5-5|CAPS2;nc|ENSG00000180881|Q9BXY5|CAPS2 61.60191391372663 0.0251951588191061 3 EVK{I|L}DD{I|L}Q 8 7 105.43 0.0 0.0 9.8668 0.0 0.0 0.0 125.07251917056875 125.07251917056875 51.20317612819049 0.0 0.0 0.0 0 2.2376954943324545 1.6989700043360187 1.2302046884880935 1.7926740567922437 EVK{I|L}DD{I|L}Q 9.8668 - 8454 + 1 1.141 158348.5 1.0 8831 5546 14374 HBL1_DMSO_200M_050219_1,14379 HBL1_DMSO_200M_050219_1,14379,KLDQNIIPE True False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14380 71.256 16.0 3548200.0 25 0 788010.0 + 35164 SRRKGGVL 8 62 436.7753003675666 871.5360478019333 2 436.7757140994072 MULTI CID FTMS 0 0 0 14374 4286772.5 0.414699592872438 -1 0.0593338012695312 6 Unmodified _SRRKGGVL_ REV__ENSG00000133858|ENST00000378743|ZFC3H1;REV__nc|ENSG00000133858|O60293-2|ZFC3H1 2.889219685676258 0.8067950007271085 3 {I|L} 1 -1 11.99 0.0 0.0 1.3757 0.0 0.0 740.4406783945099 0.0 740.4406783945099 0.0 9.771212547196624 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3757 + + 4 + 1 1.141 48685.9 1.0 8832 5546 14374 HBL1_DMSO_200M_050219_1,14380 HBL1_DMSO_200M_050219_1,14380,SRRKGGVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14381 71.257 68.0 552960.0 25 0 46192.0 + 13909 HVVEILVET 9 86 519.7950095050212 0 519.7958251833916 PEAK CID FTMS 0 0 0 14374 4206882.5 1.0 0 0.0 7 Unmodified _HVVEILVET_ ENSG00000170779|ENST00000336219|CDCA4 21.74664581756881 0.185237546287679 3 {I|L}{I|L}{I|L} 3 7 13.812 0.0 0.0 1.3312 0.0 0.0 347.1696435908046 348.13132654361567 695.3009701344203 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L} 1.3312 - 40 + 1 1.141 33943.1 1.0 8833 5546 14374 HBL1_DMSO_200M_050219_1,14381 HBL1_DMSO_200M_050219_1,14381,HVVEILVET False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14382 71.259 18.0 5118000.0 25 0 750300.0 30014 QTLEQLLQPI 10 121 394.8962164725943 1181.666820017983 3 394.8960143923759 MULTI CID FTMS 0 0 0 14374 3784081.75 1.0 0 0.0 8 Unmodified _QTLEQLLQPI_ ENSG00000186281|ENST00000434632|GPAT2;ENST00000471757.5_1_2:96691131-96693504:-|nuORF;ENST00000484440.5_1_2:96688852-96698107:-|nuORF;ENST00000486463.5_1_2:96687909-96693504:-|nuORF;nc|ENSG00000186281|Q6NUI2-3|GPAT2;nc|ENSG00000186281|Q6NUI2-5|GPAT2;nc|ENSG00000186281|Q6NUI2|GPAT2 27.088373467376528 0.3600710273140457 3 [AG]K{I|L}DD{I|L}K 8 9 61.321 0.0 0.0 5.1894 0.0 0.0 0.0 338.1697856764392 338.1697856764392 6.26165788473196 0.0 0.0 0.0 0 1.305462187404089 0.6989700043360187 1.3494850021680094 1.274227503252014 [AG]K{I|L}DD{I|L}K 5.1894 - 2415 1 1.141 80769.5 1.0 8834 5546 14374 HBL1_DMSO_200M_050219_1,14382 HBL1_DMSO_200M_050219_1,14382,QTLEQLLQPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14383 71.26 15.0 3684400.0 25 0 248370.0 + 12111 GQIEVVPEV 9 89 485.265785907011 968.517018880822 2 485.2660400271416 MULTI CID FTMS 0 0 0 14374 3560822.75 0.7793825542694823 -1 0.0593338012695312 9 Unmodified _GQIEVVPEV_ ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3 29.081581746732265 0.1611639662936252 3 [EP]Q{I|L}{I|L} 5 8 27.324 0.0 0.0 2.8212 0.0 0.0 0.0 385.1706803400595 385.1706803400595 6.747425010840047 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.2887254899964357 0.0 [EP]Q{I|L}{I|L} 2.8212 - 225 1 1.141 50030.3 1.0 8835 5546 14374 HBL1_DMSO_200M_050219_1,14383 HBL1_DMSO_200M_050219_1,14383,GQIEVVPEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14384 71.261 19.0 1878000.0 25 0 249760.0 15626 IQGGFRCL 8 64 447.2385453749671 0 447.2387267947197 PEAK CID FTMS 0 0 0 14374 2366410.25 1.0 0 0.0 10 Unmodified _IQGGFRCL_ ENSG00000077942|ENST00000327858|FBLN1;ENST00000476366.1_1_22:45937122-45946826:+|nuORF;nc|ENSG00000077942|P23142-2|FBLN1;nc|ENSG00000077942|P23142-3|FBLN1;nc|ENSG00000077942|P23142-4|FBLN1 5.760428011301431 0.5786759180849727 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.141 32869.4 1.0 8836 5546 14374 HBL1_DMSO_200M_050219_1,14384 HBL1_DMSO_200M_050219_1,14384,IQGGFRCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14385 71.262 21.0 1353300.0 25 0 109370.0 -1 YMTWMKMM 8 54 585.2287704033185 1168.442987873437 2 585.2295410037041 MULTI CID FTMS 0 0 0 14374 2119484.75 0.383143992495783 -7 0.5109100341796875 11 3 Oxidation (M) _YMTWM(Oxidation (M))KM(Oxidation (M))M(Oxidation (M))_ ENST00000445215.5_1_22:42995765-42998001:-|nuORF 12.531546534597751 0.7257836412119636 3 YM 2 -1 43.711 0.0 0.0 3.741 0.0 0.0 0.0 871.3191012018186 871.3191012018186 36.72167511924052 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YM 3.741 + + 10 + 1 1.141 27399.5 1.0 8837 5546 14374 HBL1_DMSO_200M_050219_1,14385 HBL1_DMSO_200M_050219_1,14385,YMTWMKMM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14386 71.263 37.0 556260.0 25 0 128170.0 -1 0 31 868.595840583496 0 868.8469116091728 PEAK CID FTMS 0 0 0 14374 1738133.125 1.0 0 0.0 12 3 V 1 -1 6.9897 0.0 0.0 0.40282 0.0 0.0 998.748272208458 634.3383883111936 1633.0866605196516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.40282 - 7 + 1 1.141 23876.5 1.0 8838 5546 14374 HBL1_DMSO_200M_050219_1,14386 HBL1_DMSO_200M_050219_1,14386, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14387 71.266 151.0 1233400.0 25 0 520990.0 -1 0 43 1157.4575084532182 3469.350695959855 3 1157.792163074017 MULTI CID FTMS 0 0 0 14374 2005487.375 1.0 0 0.0 13 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20147 0.0 0.0 1108.3746843701008 2210.8963004619536 3319.270984832054 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20147 - 7 + 1 1.141 122653.9 1.0 8839 5546 14374 HBL1_DMSO_200M_050219_1,14387 HBL1_DMSO_200M_050219_1,14387, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14388 71.268 51.0 848290.0 25 0 79212.0 + -1 FHCGCNNV 8 71 475.6819065690312 949.3492602048624 2 475.6822692751884 MULTI CID FTMS 0 0 0 14374 1246394.625 1.0 0 0.0 14 Carbamidomethyl (C) _FHC(Carbamidomethyl (C))GCNNV_ REV__ENST00000414718.1_1_20:12360810-12361446:+|nuORF 9.347437153973935 0.7675937258251505 3 SE 2 -1 25.217 0.0 0.0 2.6562 0.0 0.0 715.2491584308924 0.0 715.2491584308924 0.0 12.998037644757048 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SE 2.6562 - 48 1 1.141 41186.8 1.0 8840 5546 14374 HBL1_DMSO_200M_050219_1,14388 HBL1_DMSO_200M_050219_1,14388,FHCGCNNV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14389 71.271 170.0 166590.0 25 0 15985.0 39792 VERKRHLRMLE 11 61 733.9233276247978 0 733.9233276247978 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _VERKRHLRMLE_ ENST00000470240.5_1_3:160122203-160122284:+|nuORF 2.9952420565917617 0.4761840153648598 3 AT 2 11 10.969 0.0 0.0 0.74832 0.0 0.0 1051.6183457501968 239.10457788638908 1290.7229236365858 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AT 0.74832 - 24 + 1 1.141 28676.2 1.0 8841 5546 14374 HBL1_DMSO_200M_050219_1,14389 HBL1_DMSO_200M_050219_1,14389,VERKRHLRMLE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14390 71.272 35.0 762380.0 25 0 112440.0 19831 LHHDSQRV 8 66 496.2567618608671 0 496.2564575076103 PEAK CID FTMS 0 0 0 14374 1094913.625 1.0 0 0.0 16 Unmodified _LHHDSQRV_ ENST00000581067.1_1_18:5238002-5238275:-|nuORF 6.354104778181461 0.5763711549229614 3 {I|L} 1 7 6.9897 0.0 0.0 0.70567 0.0 0.0 270.0965428192963 604.2943819635374 874.3909247828337 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.70567 + + 8 + 1 1.141 29980.3 1.0 8842 5546 14374 HBL1_DMSO_200M_050219_1,14390 HBL1_DMSO_200M_050219_1,14390,LHHDSQRV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14391 71.276 182.0 608060.0 25 0 42093.0 + 28881 QALYPGHRY 9 136 552.7814788178196 1103.548404702439 2 552.7811767458916 MULTI CID FTMS 0 0 0 14374 764767.3125 1.0 0 0.0 17 Unmodified _QALYPGHRY_ REV__ENST00000541683.1_1_11:61582434-61582803:-|nuORF 11.640296217721598 0.521594087909532 3 [QA][YE]PVER{I|L} 9 -1 + 35.123 0.0 0.0 3.1828 3.1828 80.388 0.0 0.0 0.0 23.133637307377064 7.492049162231574 7.492049162231574 10.509074688805818 0 0.5 0.6020599913279624 0.0 0.0 [QA][YE]PVER{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}[SG]PVER{I|L};{[CP]|[EA]}[YQ]PVER{I|L};[DV][YN]PVER{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}[SG]PV[W{I|L}]V;{[CP]|[EA]}[YQ]PV[W{I|L}]V 3.1828;2.2305;1.9113;1.7518;1.199;0.87984 -;-;-;-;-;- 316 + 1 1.141 91960.6 1.0 8843 5546 14374 HBL1_DMSO_200M_050219_1,14391 HBL1_DMSO_200M_050219_1,14391,QALYPGHRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14392 71.28 205.0 392950.0 25 0 20598.0 + 18081 KTIDDLEETL 10 118 588.8038598587466 1175.593166784293 2 588.8055908083916 MULTI CID FTMS 0 0 0 14374 533246.375 0.1126760105807349 5 -0.3139877319335937 18 Unmodified _KTIDDLEETL_ nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2 26.020703789607367 0.3840598856887971 3 {[QN]|[E{I|L}]|[KN]}[KS]MPEET{I|L} 10 5 + 50.947 0.0 0.0 4.3337 4.3337 73.772 0.0 0.0 0.0 4.884381005764311 38.47295930833134 4.884381005764311 2.156818820794939 0 0.7302046884880937 1.3010299956639813 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[KS]MPEET{I|L};{[QN]|[E{I|L}]|[KN]}[KS]D{I|L}EET{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KT]D{I|L}EET{I|L};{[QN]|[E{I|L}]|[KN]}[DV][KT]EET{I|L};{[TV]|[{I|L}S]}WW{I|L}EET{I|L};[{I|L}A]H[HN]{I|L}EET{I|L};{NN|[MP]|[D{I|L}]|[EV]}P[QT]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ET{I|L};[DP][WR]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ET{I|L} 4.3337;4.1503;3.7833;2.8885;2.744;2.1982;1.8162;1.5684 -;-;-;-;-;-;-;- 412 1 1.141 65038.8 1.0 8844 5546 14374 HBL1_DMSO_200M_050219_1,14392 HBL1_DMSO_200M_050219_1,14392,KTIDDLEETL False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14393 71.285 276.0 358900.0 25 0 76170.0 -1 0 86 1011.7194747595416 0 1011.717333972454 PEAK CID FTMS 0 0 0 14374 459721.28125 1.0 0 0.0 19 3 {I|L}Q{I|L} 3 -1 15.59 0.0 0.0 0.77125 0.0 0.0 1028.8966388727956 635.2835787408811 1664.1802176136766 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 {I|L}Q{I|L} 0.77125 - 295 + 1 1.141 76744.1 1.0 8845 5546 14374 HBL1_DMSO_200M_050219_1,14393 HBL1_DMSO_200M_050219_1,14393, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14394 71.289 220.0 815290.0 25 0 70054.0 + 37282 TIQEEFYRV 9 180 592.8026594141614 1183.5907658951228 2 592.8015624880791 MULTI CID FTMS 0 0 0 14374 428731.625 0.6233150916503274 -1 0.0593338012695312 20 Unmodified _TIQEEFYRV_ ENSG00000076003|ENST00000264156|MCM6 40.72490554402381 0.0714771638475563 3 [{I|L}T]QEE 5 4 63.612 0.0 0.0 5.3745 0.0 0.0 0.0 580.2905023578228 580.2905023578228 47.04468577762561 0.0 0.0 0.0 0 0.6203715150305281 2.0 1.1382104921644451 0.3807196863200844 + [{I|L}T]QEE 5.3745 + + 441 + 1 1.141 132120.1 1.0 8846 5546 14374 HBL1_DMSO_200M_050219_1,14394 HBL1_DMSO_200M_050219_1,14394,TIQEEFYRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14396 71.293 112.0 514040.0 25 0 101950.0 -1 0 38 1152.1331100340517 3453.377500702355 3 1152.469897449017 MULTI CID FTMS 0 0 0 14395 249730.484375 0.0912430297300146 1 -0.0492935180664062 1 3 E 1 -1 5.4846 0.0 0.0 0.15882 0.0 0.0 2935.244579415049 386.06748377017817 3321.3120631852275 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15882 - 1 + 1 1.141 46688.4 1.0 8847 5547 14395 HBL1_DMSO_200M_050219_1,14396 HBL1_DMSO_200M_050219_1,14396, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14397 71.298 240.0 877090.0 25 0 219770.0 + -1 PTCPKPDI 8 159 464.23221979917673 926.4498866651536 2 464.2323181033134 MULTI CID FTMS 0 0 0 14395 592196.625 1.0 0 0.0 2 Carbamidomethyl (C) _PTC(Carbamidomethyl (C))PKPDI_ REV__ENSG00000071626|ENST00000233078|DAZAP1;REV__ENST00000586579.5_1_19:1407772-1428848:+|nuORF;REV__ENST00000589484.5_1_19:1417247-1428848:+|nuORF;REV__nc|ENSG00000071626|Q96EP5-2|DAZAP1 23.1484247019978 0.5573009939494978 3 [TA]WTA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V 8 -1 TA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V + + 22.038 8.1349 1.4391 2.3787 2.3787 49.25 0.0 0.0 0.0 2.064856298445573 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.2059771852360797 0.0 [TA]WTA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V 2.3787 - 453 1 1.141 159744.1 1.0 8848 5547 14395 HBL1_DMSO_200M_050219_1,14397 HBL1_DMSO_200M_050219_1,14397,PTCPKPDI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14398 71.299 8.9 6206800.0 25 0 569340.0 + -1 LMQRKRRG 8 87 530.8116335862052 0 530.8108398318291 PEAK CID FTMS 0 0 0 14395 3479612.75 1.0 0 0.0 3 Oxidation (M) _LM(Oxidation (M))QRKRRG_ REV__ENST00000392750.6_2_3:167452076-167452471:-|nuORF;REV__ENST00000470131.5_2_3:167452076-167452653:-|nuORF 5.760428011301431 0.5786759180849727 3 PES 3 -1 13.812 0.0 0.0 1.3035 0.0 0.0 162.07816553137965 581.3767183893186 743.4548839206982 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PES 1.3035 - 8 + 1 1.141 48494.9 1.0 8849 5547 14395 HBL1_DMSO_200M_050219_1,14398 HBL1_DMSO_200M_050219_1,14398,LMQRKRRG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14399 71.3 30.0 1536300.0 25 0 343130.0 40897 VLRRKPSV 8 72 477.8140344213225 953.613515909445 2 477.8140136599541 MULTI CID FTMS 0 0 0 14395 1668208.0 1.0 0 0.0 4 Unmodified _VLRRKPSV_ ENSG00000163788|ENST00000296088|SNRK 10.183394434864962 0.7604730176254005 3 SV 2 6 14.438 0.0 0.0 1.5141 0.0 0.0 749.5020027031935 0.0 749.5020027031935 0.0 4.059596690470535 0.0 0.0 0 0.0 0.0 0.25 0.0 + SV 1.5141 + + 35 + 1 1.141 43264.1 1.0 8850 5547 14395 HBL1_DMSO_200M_050219_1,14399 HBL1_DMSO_200M_050219_1,14399,VLRRKPSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14400 71.303 149.0 869890.0 25 0 223940.0 30764 RIAAAWGVPLL 11 93 583.853891409498 1165.693229885796 2 583.8535034060478 MULTI CID FTMS 0 0 0 14395 992216.1875 1.0 0 0.0 5 Unmodified _RIAAAWGVPLL_ ENST00000308436.11_1_11:62356680-62359021:-|nuORF 13.90604991867851 0.7458848613461305 3 R{I|L}[WQ]{I|L}EV{I|L} 8 7 43.413 0.0 0.0 3.7242 0.0 0.0 0.0 125.07271753482657 125.07271753482657 27.72669403309017 0.0 0.0 0.0 0 0.6747425010840047 1.5228787452803376 0.0 0.0 R{I|L}[WQ]{I|L}EV{I|L} 3.7242 - 196 + 1 1.141 104059.3 1.0 8851 5547 14395 HBL1_DMSO_200M_050219_1,14400 HBL1_DMSO_200M_050219_1,14400,RIAAAWGVPLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14401 71.307 193.0 970450.0 25 0 150550.0 + 41237 VPFVGKVHI 9 129 332.5395527618367 994.5968288857102 3 332.5393554568291 MULTI CID FTMS 0 0 0 14395 1008605.875 0.945787607872703 -2 0.1029815673828125 6 Unmodified _VPFVGKVHI_ ENSG00000131979|ENST00000491895|GCH1;nc|ENSG00000131979|P30793-2|GCH1;nc|ENSG00000131979|P30793-3|GCH1;nc|ENSG00000131979|P30793-4|GCH1 34.10243960390752 0.1078313939113124 3 VP{M(Oxidation (M))|F}VGKVH{I|L} 9 0 + 64.948 0.0 0.0 6.5301 6.5301 82.964 0.0 0.0 0.0 25.016894462103984 3.2735893438633 3.2735893438633 3.2735893438633 0 0.5055690986777881 0.8538719643217619 0.0 0.3252574989159953 + + VP{M(Oxidation (M))|F}VGKVH{I|L};VP{M(Oxidation (M))|F}VGKV{I|L}H;V{I|L}MVGKVH{I|L};V{I|L}MVGKV{I|L}H;VN[KT]GKVH{I|L};VN[KT]GKV{I|L}H;VN[KT][RK]H{I|L};VN[KT][RK]{I|L}H;VN[KT]{I|L}[RK]H;V[KQ]SGKVH{I|L} 6.5301;6.201;4.8606;4.5315;4.3393;4.0101;3.4347;3.1056;3.1056;2.6484 +;-;-;-;-;-;-;-;-;- + 948 + 1 1.141 154514.6 1.0 8852 5547 14395 HBL1_DMSO_200M_050219_1,14401 HBL1_DMSO_200M_050219_1,14401,VPFVGKVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14402 71.31 149.0 277020.0 25 0 26091.0 -1 IDKVDTVMMG 10 81 562.7700535190207 1123.5255541048414 2 562.3439819216728 MULTI CID FTMS 0 0 0 14395 168083.40625 0.2431070019577216 5 -0.3231430053710937 7 Oxidation (M) _IDKVDTVM(Oxidation (M))MG_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000471834.1_1_6:152657861-152688565:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1 8.745405648335112 0.6861838735306406 3 [VS]EEVKV 7 -1 25.167 0.0 0.0 2.24 0.0 0.0 0.0 350.08564866954765 350.08564866954765 13.177506928914582 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [VS]EEVKV 2.24 - 75 1 1.141 36863.9 1.0 8853 5547 14395 HBL1_DMSO_200M_050219_1,14402 HBL1_DMSO_200M_050219_1,14402,IDKVDTVMMG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14403 71.313 155.0 777480.0 25 0 81725.0 + + 29346 RQVEELQLQV 10 95 621.3458799909731 1240.677207048746 2 621.3463622927666 MULTI CID FTMS 0 0 0 14395 933344.0 0.9947409004895668 1 -0.0492935180664062 8 Unmodified _QIVEYLHIQV_ ENST00000606952.5_1_1:156203463-156206310:+|nuORF;ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 56.17704186161178 0.0466144807663799 3 [AG]VREE{I|L}Q{I|L}QV 11 -1 + 77.752 0.0 0.0 6.2669 6.2669 87.227 0.0 0.0 0.0 11.01686647275146 9.189918721537836 9.189918721537836 8.45098040014257 0 0.9124379954164592 1.6989700043360187 0.3252574989159953 0.3807196863200844 [AG]VREE{I|L}Q{I|L}QV;[AG]RVEE{I|L}Q{I|L}QV;[AG]VREE{I|L}[AG]{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}REE{I|L}Q{I|L}QV;[AG]RVEE{I|L}[AG]{I|L}QV;[AG]{I|L}[RD]E{I|L}Q{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}REE{I|L}[AG]{I|L}QV;{[{M(Oxidation (M))|F}H]|[RQ]}VEE{I|L}Q{I|L}QV;{[QN]|[E{I|L}]|[KN]}V[NG]E{I|L}Q{I|L}QV;{[QN]|[E{I|L}]|[KN]}[RN]E{I|L}Q{I|L}QV 6.2669;5.5857;5.5311;5.3789;4.85;4.7556;4.6403;4.5257;4.2434;4.1987 -;-;-;-;-;-;-;-;-;- 674 1 1.141 92640.4 1.0 8854 5547 14395 HBL1_DMSO_200M_050219_1,14403 HBL1_DMSO_200M_050219_1,14403,QIVEYLHIQV False False RQVEELQLQV 71.312719 621.346362292767 5266019.5 14395.0 ENST00000606952.5_1_1:156203463-156206310:+|nuORF;;ENSG00000160783|ENST00000368277|PMF1;;nc|ENSG00000160783|Q6P1K2-2|PMF1;;nc|ENSG00000160783|Q6P1K2-4|PMF1 5.707117557525635 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14404 71.317 200.0 917720.0 25 0 211120.0 + 14533 IGYKIKTLI 9 156 350.23059310835066 1047.669949925252 3 350.2306091189384 MULTI CID FTMS 0 0 0 14395 893479.4375 1.0 0 0.0 9 Unmodified _IGYKIKTLI_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 51.487983226225225 0.0371074584807926 3 {I|L}GYK{I|L}KT{I|L}{I|L} 9 0 + 65.109 0.0 0.0 6.2146 6.2146 92.905 0.0 0.0 0.0 39.88054901689698 14.09256854528806 14.09256854528806 65.10852932327772 0 1.3539171939081172 0.8538719643217619 0.6989700043360187 0.0 + + {I|L}GYK{I|L}KT{I|L}{I|L} 6.2146 + + 679 + 1 1.141 150543.9 1.0 8855 5547 14395 HBL1_DMSO_200M_050219_1,14404 HBL1_DMSO_200M_050219_1,14404,IGYKIKTLI True True IGYKIKTLI 71.316533 350.230609118938 5696199.5 14395.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1 -0.1578474044799804 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14405 71.318 75.0 865300.0 25 0 169810.0 -1 0 96 494.2889532248352 493.2816767582352 1 495.2934448122978 MULTI CID FTMS 0 0 0 14395 822323.125 1.0 0 0.0 10 3 [H{I|L}]{I|L} 3 -1 17.491 0.0 0.0 3.5459 0.0 0.0 0.0 127.03244515106644 127.03244515106644 4.30355694426034 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [H{I|L}]{I|L} 3.5459 - 38 1 1.141 54430.7 1.0 8856 5547 14395 HBL1_DMSO_200M_050219_1,14405 HBL1_DMSO_200M_050219_1,14405, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14406 71.322 173.0 1478700.0 25 0 159530.0 -1 ITTICLKSI 9 217 524.8085839636628 1047.6026149941256 2 524.8101074099541 MULTI CID FTMS 0 0 0 14395 678138.75 0.3148204480468587 -10 0.750579833984375 11 Carbamidomethyl (C) _ITTIC(Carbamidomethyl (C))LKSI_ ENSG00000184898|ENST00000331426|RBM43 23.1484247019978 0.2366544122328345 3 [{I|L}T][K{I|L}]{M(Oxidation (M))|F}A{I|L}EN 9 -1 + 26.683 0.0 0.0 2.5471 2.5471 77.254 0.0 0.0 0.0 1.352635129122902 6.5499682890045605 1.352635129122902 9.065854100203104 0 0.0044321917401078 1.0969100130080565 0.5044321917401079 0.3054621874040891 [{I|L}T][K{I|L}]{M(Oxidation (M))|F}A{I|L}EN;{[VA]|[{I|L}G]}YK{I|L}KT[EP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VK{I|L}KT[EP];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VVTV{I|L}EN;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}TA{I|L}EN;M{I|L}T[QT][KT]{I|L}{I|L};M{[DS]|[MA]|[CV]|TT}K{I|L}[KT]{I|L}{I|L};[{I|L}T][K{I|L}]KYG[EP];M{I|L}T[QT][K{I|L}]T{I|L};M{[DS]|[MA]|[CV]|TT}K{I|L}[K{I|L}]T{I|L} 2.5471;1.6817;1.6192;1.5975;1.455;1.421;1.3881;1.3349;1.1353;1.1024 -;-;-;-;-;-;-;-;-;- 2291 1 1.141 201891.3 1.0 8857 5547 14395 HBL1_DMSO_200M_050219_1,14406 HBL1_DMSO_200M_050219_1,14406,ITTICLKSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14407 71.325 197.0 925400.0 25 0 47205.0 + 34531 SPAPPLLHV 9 153 465.7748720190064 929.5351911048128 2 465.7747985720634 MULTI CID FTMS 0 0 0 14395 718932.75 1.0 0 0.0 12 Unmodified _SPAPPLLHV_ ENSG00000158941|ENST00000308511|CCAR2;nc|ENSG00000158941|Q8N163-2|CCAR2 59.79521254764295 0.0261954583213598 3 [PS]APP{I|L}{I|L}HV 9 0 + 54.993 0.0 0.0 5.9162 5.9162 85.939 0.0 0.0 0.0 41.259556258252566 8.098943791441968 8.098943791441968 8.01632346233167 0 0.8494850021680094 1.5228787452803376 0.0 0.0 + + [PS]APP{I|L}{I|L}HV;[PS]APP{I|L}H{I|L}V;[PS]APP{I|L}HV{I|L};[PS][HK]{I|L}{I|L}HV;[PS]A[{I|L}T]VVM{I|L};[PS][HK]{I|L}H{I|L}V;[PS][HK]{I|L}HV{I|L} 5.9162;5.0538;4.9194;3.15;2.6565;2.2876;2.1532 +;-;-;-;-;-;- + 505 + 1 1.141 141881.0 1.0 8858 5547 14395 HBL1_DMSO_200M_050219_1,14407 HBL1_DMSO_200M_050219_1,14407,SPAPPLLHV True True SPAPPLLHV 71.325419 465.774798572063 12544329.0 14395.0 ENSG00000158941|ENST00000308511|CCAR2;;nc|ENSG00000158941|Q8N163-2|CCAR2 8.163400650024414 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14408 71.33 236.0 1205100.0 25 0 125600.0 -1 0 151 320.211539464139 319.204262997539 1 320.2119323611259 MULTI CID FTMS 0 0 0 14395 723646.4375 0.1073864855152925 26 -2.142494201660156 13 3 HP 2 -1 35.648 0.0 0.0 11.168 0.0 0.0 0.0 82.06701837711171 82.06701837711171 6.746724518334716 0.0 0.0 0.0 0 0.6139829889124311 1.154901959985743 0.0 0.0 HP 11.168 - 21 + 1 1.141 228141.3 1.0 8859 5547 14395 HBL1_DMSO_200M_050219_1,14408 HBL1_DMSO_200M_050219_1,14408, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14409 71.334 221.0 623740.0 25 0 50496.0 + 35598 STVPGLYNV 9 159 475.2534400095699 948.4923270859398 2 475.2551452517509 MULTI CID FTMS 0 0 0 14395 489868.71875 0.3744410781366029 4 -0.2703399658203125 14 Unmodified _STVPGLYNV_ ENSG00000122592|ENST00000242159|HOXA7 16.942295170755138 0.3780752226737986 3 [PG]{I|L}YD 5 5 18.109 0.0 0.0 1.9093 0.0 0.0 0.0 400.21855934595857 400.21855934595857 5.010168892169563 0.0 0.0 0.0 0 0.0 0.494850021680094 0.3494850021680094 0.0 [PG]{I|L}YD 1.9093 - 573 1 1.141 108959.4 1.0 8860 5547 14395 HBL1_DMSO_200M_050219_1,14409 HBL1_DMSO_200M_050219_1,14409,STVPGLYNV False True STVPGLYNV 71.33399 475.255145251751 11412752.0 14395.0 ENSG00000122592|ENST00000242159|HOXA7 4.235143264134725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14410 71.338 223.0 923770.0 25 0 88470.0 + + 27935 TVMGRIATL 9 174 481.278811552249 0 481.2793151736259 PEAK CID FTMS 0 0 0 14395 443405.71875 1.0 0 0.0 15 Unmodified _PLTRPSPPP_ ENST00000485672.2_1_19:42488766-42489464:-|nuORF;ENSG00000105409|ENST00000648268|ATP1A3;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000163399|ENST00000295598|ATP1A1;nc|ENSG00000163399|P05023-2|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;nc|ENSG00000105409|P13637-3|ATP1A3;ENSG00000018625|ENST00000361216|ATP1A2;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000105409|P13637-2|ATP1A3 26.88365393820708 0.1386685954232994 3 SHT 3 -1 15.49 0.0 0.0 1.6126 0.0 0.0 113.06225157158153 519.2949492060345 632.3572007776161 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 SHT 1.6126 - 748 + 1 1.141 157862.3 1.0 8861 5547 14395 HBL1_DMSO_200M_050219_1,14410 HBL1_DMSO_200M_050219_1,14410,PLTRPSPPP False False TVMGRIATL 71.338192 481.279315173626 1630028.25 14395.0 ENST00000485672.2_1_19:42488766-42489464:-|nuORF;;ENSG00000105409|ENST00000648268|ATP1A3;;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;;ENSG00000163399|ENST00000295598|ATP1A1;;nc|ENSG00000163399|P05023-2|ATP1A1;;nc|ENSG00000163399|P05023-4|ATP1A1;;nc|ENSG00000105409|P13637-3|ATP1A3;;ENSG00000018625|ENST00000361216|ATP1A2;;nc|ENSG00000163399|P05023-3|ATP1A1;;nc|ENSG00000105409|P13637-2|ATP1A3 1.5362876523286104 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14412 71.342 1.0 29021000.0 25 0 3839900.0 + 13249 HIIENIVAV 9 49 504.297453868246 1006.580354803292 2 504.2977172732353 MULTI CID FTMS 0 0 0 14411 33459494.0 0.4589823015064943 1 -0.0599365234375 1 Unmodified _HIIENIVAV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 26.88365393820708 0.1891292719743517 3 [H{I|L}]{I|L}EN{I|L} 6 3 35.864 0.0 0.0 3.5629 0.0 0.0 0.0 284.1590023419122 284.1590023419122 18.69666231504993 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 + [H{I|L}]{I|L}EN{I|L} 3.5629 + + 59 1 1.162 32495.0 1.0 8862 5548 14411 HBL1_DMSO_200M_050219_1,14412 HBL1_DMSO_200M_050219_1,14412,HIIENIVAV False True HIIENIVAV 71.342275 504.297717273235 1228581504.0 14411.0 ENSG00000171490|ENST00000571133|RSL1D1;;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;;nc|ENSG00000171490|O76021-2|RSL1D1;;ENST00000574823.5_1_16:11935494-11935832:-|nuORF 7.11640739440918 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14413 71.343 3.7 9506200.0 25 0 1687800.0 + 9109 FFPDKPITQY 10 50 628.3215495725626 1254.6285462119251 2 628.3217040896416 MULTI CID FTMS 0 0 0 14411 10106208.0 0.3139038139739796 7 -0.5454483032226562 2 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 28.49450938151212 0.328477364964909 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}]QY 10 3 + 45.763 0.0 0.0 3.6475 3.6475 73.246 0.0 0.0 0.0 23.838031200885155 16.064921830680703 16.064921830680703 3.0102999566398125 0 0.3494850021680094 0.0 0.3807196863200844 0.3054621874040891 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}]QY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}][AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]T[AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]T[AG]Y 3.6475;3.4076;3.3441;2.6736;2.4337;2.3701 -;-;+;-;-;- + 93 + 1 1.162 34130.4 1.0 8863 5548 14411 HBL1_DMSO_200M_050219_1,14413 HBL1_DMSO_200M_050219_1,14413,FFPDKPITQY False True FFPDKPITQY 71.343452 628.321704089642 3091115712.0 14411.0 ENSG00000244038|ENST00000602624|DDOST;;nc|ENSG00000244038|P39656|DDOST;;nc|ENSG00000244038|P39656-3|DDOST;;nc|ENSG00000244038|P39656-2|DDOST 8.699620564778646 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14414 71.345 6.0 7836100.0 25 0 613020.0 + 21776 LPNAVITRI 9 72 498.8137031573884 995.6128533815768 2 498.8138915896416 MULTI CID FTMS 0 0 0 14411 8012242.5 0.082019577189797 7 -0.5454483032226562 3 Unmodified _LPNAVITRI_ ENSG00000148229|ENST00000374171|POLE3;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 37.07464296494664 0.0915153923251136 3 {I|L}PNAV{I|L}TR{I|L} 9 0 + 85.326 0.0 0.0 8.5702 8.5702 93.938 0.0 0.0 0.0 56.470232187884136 7.573166222047135 7.573166222047135 9.208187539523747 0 1.329689690656103 1.6989700043360187 0.0 0.0 + + {I|L}PNAV{I|L}TR{I|L};{I|L}PGGAV{I|L}TR{I|L} 8.5702;7.6454 +;- + 132 + 1 1.162 40930.7 1.0 8864 5548 14411 HBL1_DMSO_200M_050219_1,14414 HBL1_DMSO_200M_050219_1,14414,LPNAVITRI True True LPNAVITRI 71.344631 498.813891589642 5472248320.0 14411.0 ENSG00000148229|ENST00000374171|POLE3;;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 6.478414535522461 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14415 71.346 12.0 3047100.0 25 0 242460.0 + 32022 RVIEGDVVSAL 11 65 579.3302196584883 1156.6458863837763 2 579.3304321169853 MULTI CID FTMS 0 0 0 14411 2965586.75 0.2753946511389054 2 -0.1872024536132812 4 Unmodified _RVIEGDVVSAL_ ENSG00000169756|ENST00000544547|LIMS1;ENSG00000256671|ENST00000632897|LIMS4;ENSG00000256977|ENST00000480744|LIMS3;ENST00000603767.1_1_2:111195993-111209584:-|nuORF;nc|ENSG00000169756|P48059-3|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059|LIMS1 23.80106514851385 0.5333463718001408 3 {M(Oxidation (M))|F}VVSA{I|L} 6 6 54.641 0.0 0.0 4.7241 0.0 0.0 522.295213767775 0.0 522.295213767775 0.0 37.65153777800478 0.0 0.0 0 0.8494850021680094 0.0 0.5 0.0 {M(Oxidation (M))|F}VVSA{I|L} 4.7241 - 64 1 1.162 32228.7 1.0 8865 5548 14411 HBL1_DMSO_200M_050219_1,14415 HBL1_DMSO_200M_050219_1,14415,RVIEGDVVSAL False True RVIEGDVVSAL 71.34581 579.330432116985 138686064.0 14411.0 ENSG00000169756|ENST00000544547|LIMS1;;nc|ENSG00000169756|P48059-5|LIMS1;;ENST00000603767.1_1_2:111195993-111209584:-|nuORF;;nc|ENSG00000169756|P48059-3|LIMS1;;nc|ENSG00000169756|P48059-4|LIMS1;;ENSG00000256977|ENST00000480744|LIMS3;;ENSG00000256671|ENST00000632897|LIMS4;;nc|ENSG00000169756|P48059|LIMS1 7.627556959788005 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14416 71.347 19.0 1007800.0 25 0 74951.0 + -1 PVQRHIRQ 8 51 538.3092303622403 1074.6039077912806 2 538.3091918826103 MULTI CID FTMS 0 0 0 14411 2607586.75 0.4507361750461049 1 -0.0599365234375 5 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PVQRHIRQ_ REV__ENST00000312033.3_1_9:117150179-117150272:-|nuORF 0.6903765706972694 0.8201419426409876 3 G 1 -1 0.71334 0.0 0.0 0.066381 0.0 0.0 823.4619838184275 191.09246240787343 1014.5544462263008 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.066381 - 3 + 1 1.162 23249.8 1.0 8866 5548 14411 HBL1_DMSO_200M_050219_1,14416 HBL1_DMSO_200M_050219_1,14416,PVQRHIRQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14417 71.348 38.0 1980200.0 25 0 477730.0 + 37743 TLRCKIGWI 9 81 545.3163856108691 1088.6182182885382 2 545.3171874880791 MULTI CID FTMS 0 0 0 14411 2356406.0 0.5172680920991254 1 -0.0599365234375 6 Unmodified _TLRCKIGWI_ REV__ENSG00000145604|ENST00000274255|SKP2;REV__nc|ENSG00000145604|Q13309-4|SKP2 4.75600775471527 0.7486543447549536 3 K 1 -1 0.088644 0.0 0.0 0.0081428 0.0 0.0 874.4859226115835 83.01463495426015 957.5005575658436 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.0081428 + + 16 + 1 1.162 63151.7 1.0 8867 5548 14411 HBL1_DMSO_200M_050219_1,14417 HBL1_DMSO_200M_050219_1,14417,TLRCKIGWI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14418 71.35 56.0 2962200.0 25 0 600720.0 + 12402 GTIGLIHAV 9 142 440.7661547264594 879.5177565197189 2 440.7661315798759 MULTI CID FTMS 0 0 0 14411 1706196.25 0.0486249790674448 7 -0.5454483032226562 7 Unmodified _GTIGLIHAV_ ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF 59.79521254764295 0.0261954583213598 3 {[SA]|[TG]}{I|L}G{I|L}{I|L}HAV 9 0 + 44.196 0.0 0.0 5.025 5.025 76.466 0.0 0.0 0.0 10.373341653512796 2.4740285408874456 2.4740285408874456 2.4740285408874456 0 0.6861818737241735 1.5228787452803376 0.0 0.0 + + {[SA]|[TG]}{I|L}G{I|L}{I|L}HAV;{[SA]|[TG]}{I|L}G{I|L}{I|L}V[HA];[H{I|L}]AVA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]G{I|L}A{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]AV{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]{I|L}GA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[HA]{I|L}VA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]G{I|L}{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]{I|L}G{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[HA]V{I|L}A{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.025;4.7437;3.8456;3.6454;3.5033;3.5033;3.3031;3.3031;3.161;3.1029 +;-;-;-;-;-;-;-;-;- + 707 + 1 1.162 130372.1 1.0 8868 5548 14411 HBL1_DMSO_200M_050219_1,14418 HBL1_DMSO_200M_050219_1,14418,GTIGLIHAV True True GTIGLIHAV 71.349587 440.766131579876 1421217120.0 14411.0 ENSG00000154277|ENST00000284440|UCHL1;;ENST00000512419.5_1_4:41258929-41270087:+|nuORF 5.672853787740071 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14419 71.351 23.0 2300500.0 25 0 187580.0 + -1 MFRCTFDY 8 77 578.2332820812485 1154.4520112292969 2 578.2330200076103 MULTI CID FTMS 0 0 0 14411 1641823.375 0.36485130098926 -3 0.1522750854492187 8 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FRC(Carbamidomethyl (C))TFDY_ REV__ENST00000491694.1_1_3:111658417-111664240:+|nuORF 18.13498045792455 0.6430038125133779 3 YM[{M(Oxidation (M))|F}V][WC(Carbamidomethyl (C))]SY 8 -1 + 43.21 0.0 0.0 3.7429 3.7429 84.375 0.0 0.0 0.0 14.766668591815415 4.938871815334949 4.938871815334949 37.03881411278425 0 0.7302046884880937 1.6989700043360187 0.3054621874040891 0.0 YM[{M(Oxidation (M))|F}V][WC(Carbamidomethyl (C))]SY;[NP]T{NN|[MP]|[D{I|L}]|[EV]}[WC(Carbamidomethyl (C))]SY 3.7429;0.53456 -;- 139 + 1 1.162 43705.7 1.0 8869 5548 14411 HBL1_DMSO_200M_050219_1,14419 HBL1_DMSO_200M_050219_1,14419,MFRCTFDY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14420 71.352 44.0 1573800.0 25 0 139220.0 + 6081 DSQILPKI 8 101 457.2712833509268 912.5280137686536 2 457.2711974978447 MULTI CID FTMS 0 0 0 14411 1105329.0 0.0946347211015935 7 -0.5454483032226562 9 Unmodified _DSQILPKI_ ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF 58.6788170122104 0.1149141431586871 3 [AG]SD{I|L}{I|L} 6 6 38.747 0.0 0.0 4.2461 0.0 0.0 0.0 353.22781780601605 353.22781780601605 25.97335567438729 0.0 0.0 0.0 0 1.5 2.0 0.9436726795685342 0.0 [AG]SD{I|L}{I|L} 4.2461 - 162 1 1.162 59626.9 1.0 8870 5548 14411 HBL1_DMSO_200M_050219_1,14420 HBL1_DMSO_200M_050219_1,14420,DSQILPKI True True DSQILPKI 71.351979 457.271197497845 628792840.0 14411.0 ENST00000456481.1_1_7:137407104-137407545:+|nuORF;;ENST00000489915.1_1_18:6462145-6462637:-|nuORF;;ENSG00000089009|ENST00000202773|RPL6 4.9152936935424805 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14421 71.355 164.0 1032400.0 25 0 73794.0 + + -1 TIQEEFYRV 9 176 592.7117735031193 1183.4089940730385 2 592.7121459841728 MULTI CID FTMS 0 0 0 14411 994949.3125 0.4476982245498716 -3 0.1522750854492187 10 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FDEHCQC(Carbamidomethyl (C))V_ ENSG00000076003|ENST00000264156|MCM6 4.75600775471527 0.7486543447549536 3 QEE{M(Oxidation (M))|F}[RV]Y 7 -1 36.458 0.0 0.0 3.0808 0.0 0.0 213.95188563005172 0.0 213.95188563005172 0.0 23.9840322369416 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 QEE{M(Oxidation (M))|F}[RV]Y 3.0808 - 653 + 1 1.162 125670.2 1.0 8871 5548 14411 HBL1_DMSO_200M_050219_1,14421 HBL1_DMSO_200M_050219_1,14421,MFDEHCQCV False False TIQEEFYRV 71.355215 592.712145984173 10345105.0 14411.0 ENSG00000076003|ENST00000264156|MCM6 4.934406598409017 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14422 71.356 25.0 1972200.0 25 0 106640.0 + 2346 AQLETWISL 9 91 530.7890827109852 1059.5636124887703 2 530.7897827029228 MULTI CID FTMS 0 0 0 14411 645809.375 0.0528251538148319 -4 0.2192230224609375 11 Unmodified _AQLETWISL_ REV__ENSG00000131236|ENST00000372805|CAP1;REV__nc|ENSG00000131236|Q01518-2|CAP1 26.88365393820708 0.1891292719743517 3 [QA]{I|L} 3 -1 15.563 0.0 0.0 1.4688 0.0 0.0 0.0 744.3610422585547 744.3610422585547 2.4643735102927007 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.2887254899964357 [QA]{I|L} 1.4688 + + 63 1 1.162 44696.0 1.0 8872 5548 14411 HBL1_DMSO_200M_050219_1,14422 HBL1_DMSO_200M_050219_1,14422,AQLETWISL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14423 71.36 198.0 642220.0 25 0 42888.0 + 30915 RIVDVYENL 9 128 560.8025920109292 1119.5906310886585 2 560.8031494021416 MULTI CID FTMS 0 0 0 14411 603708.4375 1.0 0 0.0 12 Unmodified _RIVDVYENL_ ENSG00000162889|ENST00000367103|MAPKAPK2;nc|ENSG00000162889|P49137-2|MAPKAPK2 36.506200033944 0.094635877243972 3 [{I|L}V]RDVYEN{I|L} 9 2 + 60.925 0.0 0.0 5.4417 5.4417 77.46 0.0 0.0 0.0 2.149308929668912 14.973024840566469 2.149308929668912 2.149308929668912 0 0.7614393726401688 0.6020599913279624 0.0 0.6989700043360187 [{I|L}V]RDVYEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]VYEN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]VYEN{I|L};VV{[RE]|[WV]}VYEN{I|L};[{I|L}V]RDVYEGG{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]VYEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{I|L}YEN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}{I|L}YEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]VYEGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]VYEGG{I|L} 5.4417;5.2498;5.1625;5.0613;4.6193;4.6011;4.5547;4.4675;4.4273;4.3401 -;-;-;-;-;-;-;-;-;- 760 1 1.162 100383.6 1.0 8873 5548 14411 HBL1_DMSO_200M_050219_1,14423 HBL1_DMSO_200M_050219_1,14423,RIVDVYENL True True RIVDVYENL 71.3602 560.803149402142 3836406.5 14411.0 ENSG00000162889|ENST00000367103|MAPKAPK2;;nc|ENSG00000162889|P49137-2|MAPKAPK2 5.993402163187663 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14424 71.365 239.0 569490.0 25 0 85889.0 -1 FWKVRKRRCLL 11 99 781.4673188645763 1560.9200847959526 2 781.9650146365166 MULTI CID FTMS 0 0 0 14411 458929.4375 0.4261230248012251 4 -0.2738494873046875 13 Carbamidomethyl (C) _FWKVRKRRC(Carbamidomethyl (C))LL_ ENST00000526688.1_1_8:38269909-38271480:-|nuORF 0.3506318815782774 0.8734936314171269 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KV{M(Oxidation (M))|F}{I|L} 10 -1 71.737 0.0 0.0 4.5958 0.0 0.0 0.0 358.2190517635317 358.2190517635317 12.64136888583522 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.2059771852360797 1.0114393726401687 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KV{M(Oxidation (M))|F}{I|L} 4.5958 - 4069 1 1.162 98405.6 1.0 8874 5548 14411 HBL1_DMSO_200M_050219_1,14424 HBL1_DMSO_200M_050219_1,14424,FWKVRKRRCLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14425 71.369 228.0 182410.0 25 0 14384.0 + 5127 DIGSHRQLMEL 11 81 649.8306762576103 0 649.8306762576103 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _DIGSHRQLMEL_ REV__ENST00000353809.9_1_15:28000351-28000453:-|nuORF 12.240655878213236 0.4295705806160874 3 EVK{I|L}DDK 7 -1 29.429 0.0 0.0 2.2679 0.0 0.0 229.0624501452008 238.1203249567016 467.1827751019024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EVK{I|L}DDK 2.2679 - 73 + 1 1.162 38769.5 1.0 8875 5548 14411 HBL1_DMSO_200M_050219_1,14425 HBL1_DMSO_200M_050219_1,14425,DIGSHRQLMEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14426 71.374 248.0 915130.0 25 0 103990.0 + 35722 SVHGDFLNV 9 201 494.2482008888989 986.4818488445976 2 494.2482787966728 MULTI CID FTMS 0 0 0 14411 327437.5 0.4339843457480966 1 -0.0599365234375 15 Unmodified _SVHGDFLNV_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 60.07390631473393 0.0260411565414776 3 [VS]HGD{M(Oxidation (M))|F}{I|L}NV 9 0 + 52.02 0.0 0.0 5.2733 5.2733 85.289 0.0 0.0 0.0 10.117549144904793 36.88219588316974 10.117549144904793 9.208187539523747 0 1.5451140161145327 0.7695510786217261 1.4873857263035677 0.0 + + [VS]HGD{M(Oxidation (M))|F}{I|L}NV;[VS]HGD{M(Oxidation (M))|F}{I|L}GGV;[TA][HA]D{M(Oxidation (M))|F}{I|L}NV;{[HG]|PP}[VS]D{M(Oxidation (M))|F}{I|L}NV;{[HG]|PP}D[VS]{M(Oxidation (M))|F}{I|L}NV;[TA][HA]D{M(Oxidation (M))|F}{I|L}GGV;{[HG]|PP}[VS]D{M(Oxidation (M))|F}{I|L}GGV;[PA][C(Carbamidomethyl (C))Q][VS]{I|L}NV;{[HG]|PP}D[VS]{M(Oxidation (M))|F}{I|L}GGV;{[HG]|PP}D{M(Oxidation (M))|F}[VS]{I|L}NV 5.2733;4.3399;3.4573;2.6725;2.5471;2.5239;1.7391;1.729;1.6137;1.5109 +;-;-;-;-;-;-;-;-;- + 2387 1 1.162 171112.9 1.0 8876 5548 14411 HBL1_DMSO_200M_050219_1,14426 HBL1_DMSO_200M_050219_1,14426,SVHGDFLNV True True SVHGDFLNV 71.373606 494.248278796673 4681649.0 14411.0 ENSG00000169093|ENST00000381317|ASMTL;;nc|ENSG00000292339|O95671-3|ASMTL;;nc|ENSG00000292339|O95671-2|ASMTL 6.907346884409587 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14427 71.378 253.0 1500100.0 25 0 226930.0 + 35590 STVEALQNL 9 175 487.7612270997155 973.507901266231 2 487.7609435915947 MULTI CID FTMS 0 0 0 14411 313761.28125 0.1666853323177625 -2 0.0929412841796875 16 Unmodified _STVEALQNL_ ENSG00000143401|ENST00000583931|ANP32E;nc|ENSG00000143401|Q9BTT0-3|ANP32E 61.357469665136826 0.0253304979873734 3 {NN|[MP]|[D{I|L}]|[EV]}{[MG]|[TS]}A{I|L}QN{I|L} 9 4 + 35.728 0.0 0.0 3.67 3.67 78.075 0.0 0.0 0.0 10.783507402316644 6.567270949552082 6.567270949552082 7.016194524885073 0 0.809894379144197 1.0 1.2432645930102426 0.2396518287104437 {NN|[MP]|[D{I|L}]|[EV]}{[MG]|[TS]}A{I|L}QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}KWWN{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[MG]|[TS]}A{I|L}[AG]N{I|L};{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}A{I|L}QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}{[MG]|[TS]}QN{I|L};{[MG]|[TS]}{NN|[MP]|[D{I|L}]|[EV]}A{I|L}QN{I|L};[VS]{[ET]|[MV]}A{I|L}QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[PS]{[MG]|[TS]}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}Q{[MG]|[TS]}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}AGA{I|L}{[MG]|[TS]}N{I|L} 3.67;2.9493;2.7241;2.5623;2.4407;2.3271;2.126;2.0627;1.9009;1.8132 -;-;-;-;-;+;-;-;-;- + 1461 1 1.162 285010.6 1.0 8877 5548 14411 HBL1_DMSO_200M_050219_1,14427 HBL1_DMSO_200M_050219_1,14427,STVEALQNL True True STVEALQNL 71.378302 487.760943591595 13877394.0 14411.0 nc|ENSG00000143401|Q9BTT0-3|ANP32E;;ENSG00000143401|ENST00000583931|ANP32E 1.7480340202649434 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14428 71.383 236.0 206820.0 25 0 19914.0 + 8659 EVFQTTEYCVA 11 84 645.2901489138603 0 645.2901489138603 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _EVFQTTEYCVA_ REV__ENSG00000196586|ENST00000369977|MYO6;REV__nc|ENSG00000196586|Q9UM54-2|MYO6;REV__nc|ENSG00000196586|Q9UM54-4|MYO6;REV__nc|ENSG00000196586|Q9UM54-5|MYO6;REV__nc|ENSG00000196586|Q9UM54-6|MYO6;REV__nc|ENSG00000196586|Q9UM54|MYO6 8.745405648335112 0.4618489994582195 3 EKV 3 -1 14.935 0.0 0.0 1.159 0.0 0.0 166.06367556374568 763.2696016900999 929.3332772538456 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 EKV 1.159 - 25 + 1 1.162 44198.3 1.0 8878 5548 14411 HBL1_DMSO_200M_050219_1,14428 HBL1_DMSO_200M_050219_1,14428,EVFQTTEYCVA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14429 71.388 265.0 410530.0 25 0 36791.0 + 9161 FGEHCQCL 8 130 468.68748102383154 935.3604091144632 2 468.6880370974541 MULTI CID FTMS 0 0 0 14411 319702.15625 0.7854335398219965 8 -0.6668014526367188 18 Unmodified _FGEHCQCL_ REV__ENSG00000132561|ENST00000254898|MATN2;REV__nc|ENSG00000132561|O00339-2|MATN2;REV__nc|ENSG00000132561|O00339-3|MATN2;REV__nc|ENSG00000132561|O00339-4|MATN2 24.67388899826682 0.525179942228231 3 W 1 -1 19.604 0.0 0.0 2.0959 0.0 0.0 731.2704260595788 0.0 731.2704260595788 0.0 0.6145247908719362 0.0 0.0 0 0.5 0.0 0.0 0.0 W 2.0959 - 214 + 1 1.162 87985.7 1.0 8879 5548 14411 HBL1_DMSO_200M_050219_1,14429 HBL1_DMSO_200M_050219_1,14429,FGEHCQCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14430 71.392 251.0 243210.0 25 0 37240.0 + -1 CHNCDCDCGCA 11 78 678.6824828982353 0 678.6824828982353 PEAK CID FTMS 0 0 0 -1 0 19 Acetyl (Protein N-term),3 Carbamidomethyl (C) _(Acetyl (Protein N-term))C(Carbamidomethyl (C))HNC(Carbamidomethyl (C))DC(Carbamidomethyl (C))DCGCA_ REV__ENST00000451025.6_2_6:43608345-43608465:+|nuORF 0.0 0.4761840153648598 3 AYV 3 -1 14.693 0.0 0.0 1.0841 0.0 0.0 808.0842518298706 211.0729921930297 1019.1572440229004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AYV 1.0841 - 229 + 1 1.162 56210.1 1.0 8880 5548 14411 HBL1_DMSO_200M_050219_1,14430 HBL1_DMSO_200M_050219_1,14430,CHNCDCDCGCA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14431 71.398 245.0 354460.0 25 0 36626.0 + 2635 ASVTTLPFKTI 11 136 589.3433381765957 1176.6721234199913 2 589.3435546755791 MULTI CID FTMS 0 0 0 14411 246743.0625 0.1184649712816391 -14 1.0742416381835938 20 Unmodified _ASVTTLPFKTI_ REV__ENST00000434984.2_1_X:56269451-56269685:-|nuORF 9.38312468134398 0.8308777417566128 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F} 3 -1 17.932 0.0 0.0 1.5239 0.0 0.0 0.0 732.5181676917288 732.5181676917288 5.942124970647033 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F} 1.5239 - 163 1 1.162 68010.1 1.0 8881 5548 14411 HBL1_DMSO_200M_050219_1,14431 HBL1_DMSO_200M_050219_1,14431,ASVTTLPFKTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14433 71.403 75.0 3008700.0 25 0 744830.0 -1 0 57 1144.8080559618163 3431.402338485649 3 1145.476855456829 MULTI CID FTMS 0 0 0 14432 4853544.0 0.2413584656155696 5 -0.4383468627929687 1 3 {M(Oxidation (M))|F}GYW 4 -1 15.662 0.0 0.0 0.45643 0.0 0.0 1797.6162799913116 1077.5454797465732 2875.1617597378845 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}GYW 0.45643 - 89 + 1 1.164 186327.6 1.0 8882 5549 14432 HBL1_DMSO_200M_050219_1,14433 HBL1_DMSO_200M_050219_1,14433, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14434 71.407 206.0 754990.0 25 0 61712.0 + 30903 RISGETIFVTA 11 119 597.3307361082191 1192.646919283238 2 597.3306762576103 MULTI CID FTMS 0 0 0 14432 1242666.0 0.4130946646601425 2 -0.1611099243164062 2 Unmodified _RISGETIFVTA_ ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC 36.95490438235368 0.2593041297346161 3 {[TV]|[{I|L}S]}A[RD]T{I|L}{M(Oxidation (M))|F}VTA 11 4 + 70.965 0.0 0.0 5.9502 5.9502 80.596 0.0 0.0 0.0 7.533276666586119 14.190166918179628 7.533276666586119 3.0102999566398125 0 0.8252574989159953 1.0457574905606752 0.805462187404089 0.0 {[TV]|[{I|L}S]}A[RD]T{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}A{M(Oxidation (M))|F}[QP]{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}A[QP]{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}R{[DA]|[EG]}T{I|L}{M(Oxidation (M))|F}VTA;[TA]V[RD]T{I|L}{M(Oxidation (M))|F}VTA;[TA]V{M(Oxidation (M))|F}[QP]{I|L}{M(Oxidation (M))|F}VTA;[{M(Oxidation (M))|F}V]TA[QP]{I|L}{M(Oxidation (M))|F}VTA;{[MS]|[{M(Oxidation (M))|F}A]}VT[QP]{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}A[KC]{I|L}{I|L}{M(Oxidation (M))|F}VEA;[TA]V[KC]{I|L}{I|L}{M(Oxidation (M))|F}VEA 5.9502;5.6978;5.6753;5.4454;5.3186;5.0662;4.5461;3.6012;2.5465;1.9149 -;-;-;-;-;-;-;-;-;- 451 1 1.164 120465.2 1.0 8883 5549 14432 HBL1_DMSO_200M_050219_1,14434 HBL1_DMSO_200M_050219_1,14434,RISGETIFVTA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14435 71.409 108.0 1779800.0 25 0 239720.0 44417 YMDTQYYGE 9 134 390.4879917168613 1168.442145750784 3 390.4881469607353 MULTI CID FTMS 0 0 0 -1 0 3 Unmodified _YMDTQYYGE_ ENSG00000143839|ENST00000272190|REN;nc|ENSG00000143839|P00797-2|REN 10.823927491677226 0.5436922275383211 3 YM{I|L}D 4 7 52.652 0.0 0.0 4.5061 0.0 0.0 0.0 643.2064034948252 643.2064034948252 36.34048173655316 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.4247425010840047 0.0 YM{I|L}D 4.5061 - 218 + 1 1.164 157747.3 1.0 8884 5549 14432 HBL1_DMSO_200M_050219_1,14435 HBL1_DMSO_200M_050219_1,14435,YMDTQYYGE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14436 71.411 92.0 1566600.0 25 0 149060.0 + 35061 SQTSATFQL 9 142 491.7462432696678 981.4779336061356 2 491.7465392947197 MULTI CID FTMS 0 0 0 14432 1087545.125 0.4571013474578444 2 -0.1611099243164062 4 Unmodified _SQTSATFQL_ ENSG00000159593|ENST00000290810|NAE1;ENST00000563221.5_1_16:66836914-66839833:-|nuORF;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-3|NAE1;nc|ENSG00000159593|Q13564-4|NAE1 47.74868867922204 0.0453060283459952 3 [AG]TS{[SA]|[TG]}TE 8 6 32.655 0.0 0.0 3.3271 0.0 0.0 0.0 274.1436189911544 274.1436189911544 7.619256513421291 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 1.9349821530037312 0.0 [AG]TS{[SA]|[TG]}TE 3.3271 - 1425 1 1.164 111978.5 1.0 8885 5549 14432 HBL1_DMSO_200M_050219_1,14436 HBL1_DMSO_200M_050219_1,14436,SQTSATFQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14437 71.413 98.0 1715200.0 25 0 109760.0 + + 37624 QVCAIIERV 9 181 516.2950471203401 1030.57554130748 2 516.2963134646416 MULTI CID FTMS 0 0 0 14432 893294.0 0.4792633576679735 -7 0.453887939453125 5 Unmodified _TLLLGDVMGL_ ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENSG00000184110|ENST00000331666|EIF3C 19.256988751693697 0.5244284437930726 3 {[QV]|[N{I|L}]|[RA]|[KV]}PEH{I|L}[{I|L}P]V 9 -1 + 42.147 0.0 0.0 4.0897 4.0897 77.373 0.0 0.0 0.0 13.025558258294437 5.225441575872715 5.225441575872715 5.190775249321085 0 0.7215141619232908 1.3979400086720375 0.75 0.4291746928241126 {[QV]|[N{I|L}]|[RA]|[KV]}PEH{I|L}[{I|L}P]V;{[QV]|[N{I|L}]|[RA]|[KV]}PE[YV]VVV;{[QV]|[N{I|L}]|[RA]|[KV]}PEH{I|L}V[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}PEKC[KT]V;[VP]QEH{I|L}[{I|L}P]V;{[VA]|[{I|L}G]}GPEH{I|L}[{I|L}P]V;{[QV]|[N{I|L}]|[RA]|[KV]}VN{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VVV;[H{I|L}][HQ]{I|L}WVV;{[VA]|[{I|L}G]}GPE[YV]VVV;[VP]M{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VVV 4.0897;3.586;3.5827;3.2667;2.8258;2.6502;2.6157;2.5055;2.4126;2.3221 -;-;-;-;-;-;-;-;-;- 2417 1 1.164 131716.8 1.0 8886 5549 14432 HBL1_DMSO_200M_050219_1,14437 HBL1_DMSO_200M_050219_1,14437,TLLLGDVMGL False False QVCAIIERV 71.413435 516.296313464642 6097445.0 14432.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 4.223455429077148 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14438 71.418 245.0 918470.0 25 0 62592.0 -1 MFRNMPEIL 9 199 591.7860237248004 1181.5574945164008 2 591.7868530154228 MULTI CID FTMS 0 0 0 14432 761458.875 0.5033636373176541 -3 0.1528778076171875 6 2 Oxidation (M) _M(Oxidation (M))FRNM(Oxidation (M))PEIL_ ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C;nc|ENSG00000152457|Q96SD1-4|DCLRE1C 15.847184025352805 0.4077185912009129 3 Y{I|L}{I|L} 3 -1 30.802 0.0 0.0 2.6069 0.0 0.0 774.3179886206251 0.0 774.3179886206251 0.0 11.817496819840652 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 Y{I|L}{I|L} 2.6069 - 639 1 1.164 164636.9 1.0 8887 5549 14432 HBL1_DMSO_200M_050219_1,14438 HBL1_DMSO_200M_050219_1,14438,MFRNMPEIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14439 71.423 293.0 728000.0 25 0 110040.0 -1 0 127 759.10069219608 2274.28024718844 3 759.4359008669853 MULTI CID FTMS 0 0 0 14432 662546.0625 0.4269101673508433 2 -0.1611099243164062 7 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KV{M(Oxidation (M))|F}{I|L} 10 -1 62.288 0.0 0.0 2.7388 0.0 0.0 0.0 1071.5782385352295 1071.5782385352295 30.181764938649003 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.1643943297944483 1.1872730750747862 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KV{M(Oxidation (M))|F}{I|L} 2.7388 - 6757 1 1.164 159750.4 1.0 8888 5549 14432 HBL1_DMSO_200M_050219_1,14439 HBL1_DMSO_200M_050219_1,14439, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14440 71.429 276.0 1068000.0 25 0 110560.0 + 25956 NLPDEIYHV 9 213 550.2740614993681 1098.5335700655362 2 550.2714111208916 MULTI CID FTMS 0 0 0 14432 519972.25 0.0540073852808933 7 -0.6068649291992188 8 Unmodified _NLPDEIYHV_ ENSG00000148335|ENST00000372483|NTMT1 60.38955033654506 0.025866396858536 3 {[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}YHV 9 0 + 72.361 0.0 0.0 6.587 6.587 85.234 0.0 0.0 0.0 27.147642715192504 4.900862318840296 4.900862318840296 4.900862318840296 0 0.6382104921644451 2.0 0.6549471895720984 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}YHV;{[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}YVH;{[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}[HV]Y;{[QV]|[N{I|L}]|[RA]|[KV]}PGYHYHV;{[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}[KP]{[CA]|SS};{[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}[KA]{[CP]|[EA]};{[QV]|[N{I|L}]|[RA]|[KV]}PGYHYVH;{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}RPCHV;{[QV]|[N{I|L}]|[RA]|[KV]}PDERR{[CP]|[EA]};{[QV]|[N{I|L}]|[RA]|[KV]}PD{[YD]|[{M(Oxidation (M))|F}M]}H{I|L}{I|L} 6.587;6.1409;5.006;4.8947;4.6366;4.6073;4.4486;4.1378;4.0126;3.9771 +;-;-;-;-;-;-;-;-;- + 11857 + 1 1.164 224290.8 1.0 8889 5549 14432 HBL1_DMSO_200M_050219_1,14440 HBL1_DMSO_200M_050219_1,14440,NLPDEIYHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14441 71.434 294.0 813560.0 25 0 46754.0 + 17383 KMIEDLQNEL 10 167 616.8131122269399 1231.6116715206797 2 616.8131591677666 MULTI CID FTMS 0 0 0 14432 537860.875 0.0641380028496325 -4 0.2122116088867187 9 Unmodified _KMIEDLQNEL_ ENSG00000198887|ENST00000361138|SMC5 121.5340881639634 0.0004114631882045 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QNE{I|L} 10 0 + 101.31 0.0 0.0 8.2254 8.2254 88.407 0.0 0.0 0.0 4.376174468837704 16.53212513775344 4.376174468837704 4.376174468837704 0 0.6237125054200234 0.0 1.829689690656103 1.960409376976188 + + {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QNE{I|L};{NN|[MP]|[D{I|L}]|[EV]}EMK{I|L}QNE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}EDQ{I|L}NE{I|L};[KP]{M(Oxidation (M))|F}ED{I|L}QNE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QGGE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}[AG]NE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}MK{I|L}QNE{I|L};{NN|[MP]|[D{I|L}]|[EV]}EMKQ{I|L}NE{I|L};{NN|[MP]|[D{I|L}]|[EV]}EMK{I|L}QGGE{I|L};{NN|[MP]|[D{I|L}]|[EV]}EMK{I|L}[AG]NE{I|L} 8.2254;7.8701;7.6418;7.4922;7.4813;7.4813;7.3935;7.2865;7.126;7.126 +;-;-;-;-;-;-;-;-;- + 20633 1 1.164 181823.4 1.0 8890 5549 14432 HBL1_DMSO_200M_050219_1,14441 HBL1_DMSO_200M_050219_1,14441,KMIEDLQNEL True True KMIEDLQNEL 71.433908 616.813159167767 272584944.0 14432.0 ENSG00000198887|ENST00000361138|SMC5 4.89474630355835 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14442 71.439 302.0 295550.0 25 0 36160.0 + 2299 AQIEAKFYEEV 11 124 663.8323021107948 1325.6500512883897 2 663.8325073122978 MULTI CID FTMS 0 0 0 14432 524691.75 1.0 0 0.0 10 Unmodified _AQIEAKFYEEV_ ENSG00000187109|ENST00000618691|NAP1L1;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1 64.69154705217129 0.0501048056983406 3 [QA]{I|L}YYE{I|L}EVQA 11 7 + 86.407 0.0 0.0 6.5181 6.5181 83.178 0.0 0.0 0.0 19.854098072537425 46.92085350219358 19.854098072537425 3.4948500216800937 0 1.0 0.8239087409443188 0.6989700043360187 0.4247425010840047 [QA]{I|L}YYE{I|L}EVQA;[QA]{I|L}Y{I|L}YEEVQA;[QA]{I|L}YYEE{I|L}VQA;[QA]{I|L}YY{I|L}EEVQA;[QA]{I|L}YYE{I|L}EV[AG]A;[QA]{I|L}EYY{I|L}EVQA;[QA]{I|L}Y{I|L}YEEV[AG]A;[QA]{I|L}YYEE{I|L}V[AG]A;[QA]{I|L}EYYE{I|L}VQA;[QA]{I|L}YY{I|L}EEV[AG]A 6.5181;6.2544;6.1581;6.0273;5.8294;5.7606;5.5658;5.4695;5.4007;5.3387 -;-;-;-;-;-;-;-;-;- 5995 1 1.164 73447.6 1.0 8891 5549 14432 HBL1_DMSO_200M_050219_1,14442 HBL1_DMSO_200M_050219_1,14442,AQIEAKFYEEV True True AQIEAKFYEEV 71.439435 663.832507312298 10512003.0 14432.0 ENST00000549988.5_1_12:76453547-76478450:-|nuORF;;nc|ENSG00000187109|P55209-3|NAP1L1;;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;;ENSG00000187109|ENST00000618691|NAP1L1;;nc|ENSG00000187109|P55209-2|NAP1L1 7.524102369944255 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14443 71.445 319.0 873280.0 25 0 129210.0 + 18956 RAIDVSVMV 9 207 495.2754088611575 988.536264789115 2 495.2760192751884 MULTI CID FTMS 0 0 0 14432 472398.125 0.9597029561289424 -1 0.0599365234375 11 Unmodified _LDEKRVMV_ nc|ENSG00000160293|P52735-2|VAV2;nc|ENSG00000160293|P52735-3|VAV2;ENSG00000160293|ENST00000371850|VAV2 20.453626601364224 0.6087503291685402 3 {NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}VSVMV 9 3 + 42.524 0.0 0.0 4.3018 4.3018 74.535 0.0 0.0 0.0 1.1716555447869652 10.654755048755362 1.1716555447869652 2.8193996767760865 0 0.5 1.154901959985743 0.4247425010840047 0.2396518287104437 {NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}VSVMV;[H{I|L}]{I|L}EN{I|L}G{[HG]|PP};[H{I|L}]{I|L}EN[HK]V;[DV]N{I|L}{I|L}SVMV;{[VA]|[{I|L}G]}{[RE]|[WV]}VSVMV;[DV]NT[{I|L}V]VMV;[{I|L}V]{[QD]|[EN]|[WG]|[KD]|[RS]}VSVMV;{[ET]|[MV]}[KP]VSVMV;[KP]{[ET]|[MV]}VSVMV;[TP]A[KP]{M(Oxidation (M))|F}VMV 4.3018;4.0166;3.7847;3.7148;3.6803;3.4103;3.199;3.0296;2.8752;2.8702 -;-;-;-;-;-;-;-;-;- 1643 1 1.164 208899.7 1.0 8892 5549 14432 HBL1_DMSO_200M_050219_1,14443 HBL1_DMSO_200M_050219_1,14443,LDEKRVMV False False RAIDVSVMV 71.445231 495.276019275188 5095721.0 14432.0 nc|ENSG00000160293|P52735-2|VAV2;;nc|ENSG00000160293|P52735-3|VAV2;;ENSG00000160293|ENST00000371850|VAV2 3.154157082239786 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14444 71.452 356.0 626530.0 25 0 86936.0 26383 NTDFDFFSY 9 168 385.8251214862625 1154.4535350589874 3 385.8245422244072 MULTI CID FTMS 0 0 0 14432 495056.21875 0.7615350322096583 -2 0.1092300415039062 12 Unmodified _NTDFDFFSY_ nc|ENSG00000272578|Q6P575|GUSBP11 15.847184025352805 0.4077185912009129 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RN]DMYY 8 7 + 25.705 0.0 0.0 2.2266 2.2266 74.149 0.0 0.0 0.0 6.554567255559611 3.0294233868987845 3.0294233868987845 5.7783248807594845 0 0.2742275032520141 2.0 0.5752574989159953 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RN]DMYY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RN]MDYY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RN]MYDY;YY[EP]YNGSY;[YE]{M(Oxidation (M))|F}YQQDY;[{M(Oxidation (M))|F}E][QT]PQQDY;{[{M(Oxidation (M))|F}C]|[YS]}[NS]{I|L}MYDY;[YN]{[CA]|SS}{I|L}MYDY;{[{M(Oxidation (M))|F}C]|[YS]}[NS]{I|L}DMYY;[YE]{M(Oxidation (M))|F}QQYDY 2.2266;1.7261;1.7051;1.6589;0.94603;0.92644;0.84192;0.80228;0.69279;0.68304 -;-;-;-;-;-;-;-;-;- 1956 1 1.164 180981.5 1.0 8893 5549 14432 HBL1_DMSO_200M_050219_1,14444 HBL1_DMSO_200M_050219_1,14444,NTDFDFFSY False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14445 71.459 397.0 278030.0 25 0 27221.0 + 13347 HLEEDLKEVL 10 147 408.8854195066518 1223.6344291201551 3 408.8854553103447 MULTI CID FTMS 0 0 0 14432 389370.71875 0.3893140492237099 2 -0.1611099243164062 13 Unmodified _HLEEDLKEVL_ ENSG00000101057|ENST00000217026|MYBL2;nc|ENSG00000101057|P10244-2|MYBL2 29.43715596616401 0.3072975788498757 3 {[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}D{I|L}KVE{I|L} 10 4 + 54.877 0.0 0.0 4.4848 4.4848 83.854 0.0 0.0 0.0 2.300177054349213 39.39269717234605 2.300177054349213 10.738536004985768 0 0.5629529932484498 0.0 1.416386562212267 1.0189301784845295 {[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}D{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}TAH{[QG]|[NA]}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]S{[QG]|[NA]}KVE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VK{[QG]|[NA]}S[W{M(Oxidation (M))|F}]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[VS]H{[QG]|[NA]}KVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}G[YC(Carbamidomethyl (C))]{I|L}KVE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VK{[QG]|[NA]}HA[DP]{I|L};{[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}S{I|L}RVE{I|L};[VP][HM]S{[QG]|[NA]}KVE{I|L};{[QN]|[E{I|L}]|[KN]}T[HD]{I|L}RVE{I|L} 4.4848;3.6072;3.3949;3.2694;3.1489;3.1072;2.9895;2.9245;2.8884;2.7432 -;-;-;-;-;-;-;-;-;- 903 1 1.164 95901.1 1.0 8894 5549 14432 HBL1_DMSO_200M_050219_1,14445 HBL1_DMSO_200M_050219_1,14445,HLEEDLKEVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14446 71.466 343.0 320490.0 25 0 19630.0 -1 PSKGRHCGSY 10 142 574.769174280256 1147.523795627312 2 574.7700683474541 MULTI CID FTMS 0 0 0 14432 361532.375 0.6438013018001338 -3 0.1528778076171875 14 Carbamidomethyl (C) _PSKGRHC(Carbamidomethyl (C))GSY_ ENST00000243253.7_1_3:127789169-127789619:+|nuORF 8.745405648335112 0.6861838735306406 3 SY 2 -1 24.024 0.0 0.0 2.0935 0.0 0.0 879.4166809785323 0.0 879.4166809785323 0.0 9.91680471230615 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 SY 2.0935 + + 369 + 1 1.164 84595.9 1.0 8895 5549 14432 HBL1_DMSO_200M_050219_1,14446 HBL1_DMSO_200M_050219_1,14446,PSKGRHCGSY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14447 71.475 473.0 470010.0 25 0 18886.0 + 42310 VSVGDLTEV 9 123 918.4769977516124 917.4697212850124 1 918.4606811404228 MULTI CID FTMS 0 0 0 -1 0 15 Unmodified _VSVGDLTEV_ ENSG00000132017|ENST00000254337|DCAF15 85.27202061508552 0.0162393975915471 3 SMVA{I|L}SV 7 6 55.379 0.0 0.0 6.036 0.0 0.0 212.080370017775 0.0 212.080370017775 0.0 22.26432550687165 0.0 0.0 0 0.0 0.0 1.569341519366547 0.0 SMVA{I|L}SV 6.036 - 8328 1 1.164 143807.5 1.0 8896 5549 14432 HBL1_DMSO_200M_050219_1,14447 HBL1_DMSO_200M_050219_1,14447,VSVGDLTEV True True VSVGDLTEV 71.474556 918.460681140423 8154053.0 14432.0 ENSG00000132017|ENST00000254337|DCAF15 2.3466528256734214 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14448 71.485 568.0 503320.0 25 0 31760.0 + + 25360 NAVITRII 8 243 450.2872405335706 0 450.2877380251884 PEAK CID FTMS 0 0 0 14432 251064.390625 1.0 0 0.0 16 Unmodified _NAVIKKQV_ ENSG00000148229|ENST00000374171|POLE3;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 34.10243960390752 0.1934076185521331 3 AV{I|L} 3 -1 21.198 0.0 0.0 2.3591 0.0 0.0 114.05365479585367 498.30599678436977 612.3596515802235 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 AV{I|L} 2.3591 + + 142 + 1 1.164 216173.3 1.0 8897 5549 14432 HBL1_DMSO_200M_050219_1,14448 HBL1_DMSO_200M_050219_1,14448,NAVIKKQV False False NAVITRII 71.484522 450.287738025188 3238094.0 14432.0 ENSG00000148229|ENST00000374171|POLE3;;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 2.815004309018453 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14449 71.494 509.0 209880.0 25 0 38558.0 -1 MFCDMCDRGY 10 117 685.7355834841728 0 685.7355834841728 PEAK CID FTMS 0 0 0 -1 0 17 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FC(Carbamidomethyl (C))DMC(Carbamidomethyl (C))DRGY_ ENSG00000130024|ENST00000339209|PHF10;nc|ENSG00000130024|Q8WUB8-2|PHF10;nc|ENSG00000130024|Q8WUB8-3|PHF10 4.3292370932331545 0.3961065659209837 3 DD{I|L}Q 4 -1 18.66 0.0 0.0 1.3626 0.0 0.0 702.1047539514128 193.13532434635 895.2400782977628 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 DD{I|L}Q 1.3626 - 219 + 1 1.164 84860.8 1.0 8898 5549 14432 HBL1_DMSO_200M_050219_1,14449 HBL1_DMSO_200M_050219_1,14449,MFCDMCDRGY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14450 71.503 520.0 202330.0 25 0 25036.0 -1 0 115 762.6572407523083 2284.9498928571247 3 763.7735473513603 MULTI CID FTMS 0 0 0 -1 0 18 3 P{I|L}M[HN]SY 7 -1 29.028 0.0 0.0 1.2704 0.0 0.0 1424.5971322101188 0.0 1424.5971322101188 0.0 -0.0621209712321757 -0.0621209712321757 0.0 0 0.0 0.0 0.5796896906561032 0.0 P{I|L}M[HN]SY 1.2704 - 1234 + 1 1.164 79067.5 1.0 8899 5549 14432 HBL1_DMSO_200M_050219_1,14450 HBL1_DMSO_200M_050219_1,14450, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14451 71.515 616.0 789180.0 25 0 84307.0 + 22436 LPTMPPVSP 9 231 469.7540989887669 0 469.7532836794853 PEAK CID FTMS 0 0 0 14432 170437.03125 0.32028419280997 2 -0.1611099243164062 19 Unmodified _LPTMPPVSP_ REV__ENSG00000244462|ENST00000374114|RBM12 32.30548876998284 0.0995446103270859 3 V{I|L}DQEVG 7 -1 36.593 0.0 0.0 3.9032 0.0 0.0 126.05225207734016 68.05145441226796 194.1037064896081 0.0 0.0 0.0 0.0 0 0.4274913471593705 0.0 1.031234684152075 0.9802046884880936 V{I|L}DQEVG 3.9032 - 1725 + 1 1.164 363414.7 1.0 8900 5549 14432 HBL1_DMSO_200M_050219_1,14451 HBL1_DMSO_200M_050219_1,14451,LPTMPPVSP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14452 71.525 614.0 197580.0 25 0 8073.5 -1 MYFWKRFCFWK 11 133 857.9023925662041 0 857.9023925662041 PEAK CID FTMS 0 0 0 -1 0 20 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.4761840153648598 3 PN{I|L}NAC(Carbamidomethyl (C))[{M(Oxidation (M))|F}V]KT{I|L}S 12 -1 39.752 0.0 0.0 2.3196 0.0 0.0 245.0830358634105 121.04113184146718 366.1241677048777 0.0 0.0 0.0 0.0 0 0.9489700043360187 0.0 0.3494850021680094 0.8252574989159953 PN{I|L}NAC(Carbamidomethyl (C))[{M(Oxidation (M))|F}V]KT{I|L}S 2.3196 - 1361 + 1 1.164 83840.0 1.0 8901 5549 14432 HBL1_DMSO_200M_050219_1,14452 HBL1_DMSO_200M_050219_1,14452,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14454 71.529 0.97 51064000.0 25 0 5715400.0 + 17809 KQLDDLKVEL 10 94 600.8452342256743 1199.6759155181485 2 600.8467895388603 MULTI CID FTMS 0 0 0 14453 50470616.0 0.1502004107923656 4 -0.3110809326171875 1 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 80.89551112106177 0.0163339094631175 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L} 10 4 + 85.232 0.0 0.0 7.1046 7.1046 82.492 0.0 0.0 0.0 2.04628427264403 16.53212513775344 2.04628427264403 2.04628427264403 0 1.4361818737241734 1.2218487496163564 0.805462187404089 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L};[KQ]{I|L}DD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}KQKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]D{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}K[AG]KVE{I|L};[K{I|L}]QDD{I|L}KVE{I|L};[KQ]{I|L}TNQKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{NN|[MP]|[D{I|L}]|[EV]}QKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}RQKVE{I|L} 7.1046;6.934;6.934;6.4412;6.3406;6.1701;6.1235;5.7841;5.7261;5.622 -;+;-;-;-;-;-;-;-;- + 1340 1 1.164 39154.5 1.0 8902 5550 14453 HBL1_DMSO_200M_050219_1,14454 HBL1_DMSO_200M_050219_1,14454,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14455 71.531 1.3 27632000.0 25 0 3958400.0 + 17818 KQLDDLKVEL 10 63 400.8994160702367 1199.67641881091 3 400.8998901247978 MULTI CID FTMS 0 0 0 14453 35743692.0 0.1729510944438014 6 -0.4795989990234375 2 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 17.04857598603903 0.5614834650426465 3 [K{I|L}]QDD{I|L} 6 6 30.367 0.0 0.0 2.5313 0.0 0.0 0.0 484.27607434512055 484.27607434512055 16.387437564371012 0.0 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.4247425010840047 [K{I|L}]QDD{I|L} 2.5313 - 67 1 1.164 34224.1 1.0 8903 5550 14453 HBL1_DMSO_200M_050219_1,14455 HBL1_DMSO_200M_050219_1,14455,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14456 71.532 2.9 11026000.0 25 0 1295300.0 + 44431 YMIDPSGVSY 10 62 566.2550379169405 1130.495522900681 2 566.2553588747978 MULTI CID FTMS 0 0 0 14453 14802897.0 0.7375755057258042 -2 0.1872024536132812 3 Unmodified _YMIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 20.453626601364224 0.5043500229302764 3 SY 2 8 24.024 0.0 0.0 2.1251 0.0 0.0 862.3889984267602 0.0 862.3889984267602 0.0 7.825834421237516 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + SY 2.1251 + + 30 + 1 1.164 32132.6 1.0 8904 5550 14453 HBL1_DMSO_200M_050219_1,14456 HBL1_DMSO_200M_050219_1,14456,YMIDPSGVSY False True YMIDPSGVSY 71.531838 566.255358874798 399495328.0 14453.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 5.696780363718669 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14457 71.533 12.0 3548600.0 25 0 438370.0 + 168 AAMEDLTRL 9 60 510.2632440693411 1018.5119352054822 2 510.2632018923759 MULTI CID FTMS 0 0 0 14453 4528726.0 0.7215502366928344 1 -0.033843994140625 4 Unmodified _AAMEDLTRL_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000523646.1_1_8:109240494-109241379:-|nuORF 38.17557092003332 0.0854718145212029 3 AAMED{I|L}TR{I|L} 9 0 + 70.601 0.0 0.0 6.9318 6.9318 86.082 0.0 0.0 0.0 58.81797293241048 9.710536658395128 9.710536658395128 4.771212547196626 0 0.7302046884880937 1.6989700043360187 0.4247425010840047 0.0 + + AAMED{I|L}TR{I|L};AAME{I|L}DTR{I|L} 6.9318;6.4633 +;- + 53 + 1 1.164 38659.5 1.0 8905 5550 14453 HBL1_DMSO_200M_050219_1,14457 HBL1_DMSO_200M_050219_1,14457,AAMEDLTRL True True AAMEDLTRL 71.533018 510.263201892376 136382460.0 14453.0 ENST00000523646.1_1_8:109240494-109241379:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 5.858909130096436 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14458 71.534 12.0 4231200.0 25 0 461940.0 + 35072 SQVDRLVALA 10 87 536.3117540080956 1070.608955082991 2 536.3119994997978 MULTI CID FTMS 0 0 0 14453 4026068.0 1.0 0 0.0 5 Unmodified _SQVDRLVALA_ ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2;nc|ENSG00000063241|Q96AB3-3|ISOC2 32.61649475675321 0.2358628368497494 3 {I|L}VA{I|L}A 5 5 30.886 0.0 0.0 2.8849 0.0 0.0 585.2874623029312 0.0 585.2874623029312 0.0 17.81357210935475 0.0 0.0 0 0.8667053245199625 0.0 0.0 0.0 + {I|L}VA{I|L}A 2.8849 + + 75 1 1.164 47332.0 1.0 8906 5550 14453 HBL1_DMSO_200M_050219_1,14458 HBL1_DMSO_200M_050219_1,14458,SQVDRLVALA False True SQVDRLVALA 71.534195 536.311999499798 34042788.0 14453.0 ENSG00000063241|ENST00000425675|ISOC2;;nc|ENSG00000063241|Q96AB3-2|ISOC2;;nc|ENSG00000063241|Q96AB3-3|ISOC2 5.389553387959798 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14459 71.535 14.0 4080500.0 25 0 960760.0 31787 RSPRGILG 8 68 428.2616896519712 854.5088263707423 2 428.2617065310478 MULTI CID FTMS 0 0 0 14453 3691660.75 0.2426953300062434 3 -0.1778793334960937 6 Unmodified _RSPRGILG_ ENST00000298310.9_1_14:50319457-50319715:-|nuORF 0.0 0.8243325171867699 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.164 49454.7 1.0 8907 5550 14453 HBL1_DMSO_200M_050219_1,14459 HBL1_DMSO_200M_050219_1,14459,RSPRGILG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14460 71.537 13.0 4492400.0 25 0 647050.0 -1 MFHKLRPV 8 88 522.2960028201737 1042.5774527071474 2 522.2957641482353 MULTI CID FTMS 0 0 0 14453 3604568.25 0.5189489442083219 3 -0.1778793334960937 7 Oxidation (M) _M(Oxidation (M))FHKLRPV_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 2.889219685676258 0.8067950007271085 3 W 1 -1 2.2185 0.0 0.0 0.21279 0.0 0.0 748.4733400135912 104.99885736636952 853.4721973799607 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.21279 - 21 + 1 1.164 48121.0 1.0 8908 5550 14453 HBL1_DMSO_200M_050219_1,14460 HBL1_DMSO_200M_050219_1,14460,MFHKLRPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14461 71.538 16.0 3272700.0 25 0 746430.0 + 12586 GVIGGDNIRL 10 55 507.2903971021708 1012.5662412711416 2 507.2908203005791 MULTI CID FTMS 0 0 0 14453 3004369.75 0.3554662417845522 3 -0.1778793334960937 8 Unmodified _GVIGGDNIRL_ ENSG00000108506|ENST00000251334|INTS2;nc|ENSG00000108506|Q9H0H0|INTS2 18.373094154950223 0.5392593366289069 3 [VG]{I|L}GGD{[QV]|[N{I|L}]|[RA]|[KV]}R{I|L} 10 0 + 51.731 0.0 0.0 5.1089 5.1089 81.854 0.0 0.0 0.0 39.59137916201555 5.528419686577806 5.528419686577806 6.53212513775344 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + [VG]{I|L}GGD{[QV]|[N{I|L}]|[RA]|[KV]}R{I|L};[VG]{I|L}ND{[QV]|[N{I|L}]|[RA]|[KV]}R{I|L} 5.1089;4.4638 +;- + 76 + 1 1.164 47593.3 1.0 8909 5550 14453 HBL1_DMSO_200M_050219_1,14461 HBL1_DMSO_200M_050219_1,14461,GVIGGDNIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14462 71.539 26.0 4971900.0 25 0 632530.0 21072 LPAGGILVF 9 127 443.7734510303929 885.5323491275858 2 443.7734863162041 MULTI CID FTMS 0 0 0 14453 2096031.0 0.1226434922264719 34 -2.703277587890625 9 Unmodified _LPAGGILVF_ ENSG00000150990|ENST00000308736|DHX37 28.17323086031832 0.1727213568982648 3 {I|L}PYV 4 6 51.241 0.0 0.0 5.7864 0.0 0.0 0.0 410.2408541315063 410.2408541315063 20.16576847905811 0.0 0.0 0.0 0 0.6203715150305281 2.0 0.0 0.0 {I|L}PYV 5.7864 - 809 + 1 1.164 106256.9 1.0 8910 5550 14453 HBL1_DMSO_200M_050219_1,14462 HBL1_DMSO_200M_050219_1,14462,LPAGGILVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14463 71.54 22.0 3774800.0 25 0 460140.0 -1 YMTWMKMM 8 68 585.2287704033185 1168.442987873437 2 585.2289306521416 MULTI CID FTMS 0 0 0 14453 1971821.875 0.3564506447512872 -3 0.2364959716796875 10 3 Oxidation (M) _YMTWM(Oxidation (M))KM(Oxidation (M))M(Oxidation (M))_ ENST00000445215.5_1_22:42995765-42998001:-|nuORF 12.531546534597751 0.7257836412119636 3 YM 2 -1 42.206 0.0 0.0 3.6122 0.0 0.0 0.0 871.3178346111838 871.3178346111838 27.42992819099939 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YM 3.6122 + + 44 + 1 1.164 65927.2 1.0 8911 5550 14453 HBL1_DMSO_200M_050219_1,14463 HBL1_DMSO_200M_050219_1,14463,YMTWMKMM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14464 71.541 44.0 1249400.0 25 0 83589.0 + 3988 DALRPPLQNI 10 98 568.8250783070122 1135.6356036808245 2 568.8245727419853 MULTI CID FTMS 0 0 0 14453 1465284.125 0.1918569096993995 -7 0.4645614624023437 11 Unmodified _DALRPPLQNI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 53.40400417844725 0.0601721406801337 3 {[DA]|[EG]}{I|L}R{I|L}{[RE]|[WV]}{M(Oxidation (M))|F} 8 5 49.875 0.0 0.0 4.3918 0.0 0.0 0.0 132.04602991275627 132.04602991275627 -5.690454017927777 0.0 -5.690454017927777 0.0 0 1.0 1.3979400086720375 0.2742275032520141 1.305462187404089 {[DA]|[EG]}{I|L}R{I|L}{[RE]|[WV]}{M(Oxidation (M))|F} 4.3918 - 415 + 1 1.164 46233.6 1.0 8912 5550 14453 HBL1_DMSO_200M_050219_1,14464 HBL1_DMSO_200M_050219_1,14464,DALRPPLQNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14465 71.543 71.0 1769600.0 25 0 426540.0 42101 VRKSLGRG 8 93 436.7753003675666 871.5360478019333 2 436.7755004763603 MULTI CID FTMS 0 0 0 14453 1482524.875 0.1434184954031878 3 -0.1778793334960937 12 Unmodified _VRKSLGRG_ ENSG00000156983|ENST00000383829|BRPF1;nc|ENSG00000156983|P55201-3|BRPF1;nc|ENSG00000156983|P55201-4|BRPF1;nc|ENSG00000156983|P55201|BRPF1 0.0 0.8243325171867699 3 {I|L} 1 7 11.783 0.0 0.0 1.352 0.0 0.0 740.4411208993927 0.0 740.4411208993927 0.0 2.3187864658084045 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.352 + + 14 + 1 1.164 102900.3 1.0 8913 5550 14453 HBL1_DMSO_200M_050219_1,14465 HBL1_DMSO_200M_050219_1,14465,VRKSLGRG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14466 71.544 41.0 1652400.0 25 0 202930.0 + 38310 TQILSVPKV 9 79 492.8081498552613 983.6017467773228 2 492.8082458376884 MULTI CID FTMS 0 0 0 14453 1311374.75 0.3185052915120919 -7 0.4645614624023437 13 Unmodified _TQILSVPKV_ nc|ENSG00000120802|P42166|TMPO 38.61474834105838 0.0830609365873449 3 [QT]{I|L}{I|L}SVT{I|L}G 9 3 52.902 0.0 0.0 5.3784 0.0 0.0 0.0 68.05144678287343 68.05144678287343 42.30637210040088 0.0 0.0 0.0 0 0.9247425010840048 1.0457574905606752 0.3054621874040891 0.0 [QT]{I|L}{I|L}SVT{I|L}G 5.3784 - 106 + 1 1.164 61440.3 1.0 8914 5550 14453 HBL1_DMSO_200M_050219_1,14466 HBL1_DMSO_200M_050219_1,14466,TQILSVPKV True True TQILSVPKV 71.544163 492.808245837688 113968592.0 14453.0 nc|ENSG00000120802|P42166|TMPO 6.286932309468587 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14467 71.545 21.0 1397600.0 25 0 88014.0 -1 MPVIPMNTI 9 76 516.2673715880271 0 516.2673828005791 PEAK CID FTMS 0 0 0 14453 835607.625 0.4514637962742285 -6 0.4064254760742187 14 Oxidation (M) _MPVIPM(Oxidation (M))NTI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 12.531546534597751 0.2832320739326029 3 {I|L}TN 3 -1 16.682 0.0 0.0 1.6188 0.0 0.0 458.2553719828916 241.06565271549064 699.3210246983823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}TN 1.6188 - 38 + 1 1.164 30354.7 1.0 8915 5550 14453 HBL1_DMSO_200M_050219_1,14467 HBL1_DMSO_200M_050219_1,14467,MPVIPMNTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14468 71.547 42.0 1035600.0 25 0 80294.0 + 26119 NPREWTPEI 9 69 571.2863532668998 1140.5581536005996 2 571.2858764529228 MULTI CID FTMS 0 0 0 14453 882621.9375 0.0921415367293803 6 -0.4795989990234375 15 Unmodified _NPREWTPEI_ ENSG00000134759|ENST00000358232|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 32.78568957990786 0.1150597335874693 3 [EP][RN]WTPE{I|L} 9 2 + 50.352 0.0 0.0 4.4147 4.4147 84.31 0.0 0.0 0.0 9.724440094127544 22.904849854573683 9.724440094127544 13.239087409443188 0 0.7742275032520141 1.6989700043360187 0.4247425010840047 0.0 [EP][RN]WTPE{I|L};[EP][RN]EGG[RN]{I|L};[EP][RN]EN[RN]{I|L} 4.4147;3.2539;2.6812 -;-;- 150 1 1.164 42489.2 1.0 8916 5550 14453 HBL1_DMSO_200M_050219_1,14468 HBL1_DMSO_200M_050219_1,14468,NPREWTPEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14469 71.549 122.0 1187800.0 25 0 96217.0 + -1 VAASLSNQK 9 122 459.2283951475518 1832.8844747238072 4 459.2285339236259 MULTI CID FTMS 0 0 0 14453 863846.1875 0.7328049913414575 1 -0.033843994140625 16 nc|ENSG00000198231|Q86XP3-2|DDX42;ENSG00000198231|ENST00000389924|DDX42;ENST00000578593.1_1_17:61889231-61895755:+|nuORF 3 PH{M(Oxidation (M))|F}D{I|L}SHGS[QA]VK 13 -1 61.114 0.0 0.0 3.3343 0.0 0.0 411.1775633339865 0.0 411.1775633339865 0.0 27.63526124946976 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.2887254899964357 PH{M(Oxidation (M))|F}D{I|L}SHGS[QA]VK 3.3343 - 1127 + 1 1.164 120786.8 1.0 8917 5550 14453 HBL1_DMSO_200M_050219_1,14469 HBL1_DMSO_200M_050219_1,14469, False False VAASLSNQK 71.549063 459.228533923626 9130718.0 14453.0 nc|ENSG00000198231|Q86XP3-2|DDX42;;ENSG00000198231|ENST00000389924|DDX42;;ENST00000578593.1_1_17:61889231-61895755:+|nuORF 0.9427575866381328 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14470 71.551 82.0 1403100.0 25 0 91879.0 + 12112 GQIEVVPEV 9 122 485.265785907011 968.517018880822 2 485.2659789919853 MULTI CID FTMS 0 0 0 14453 787264.3125 0.1723141290201704 3 -0.1778793334960937 17 Unmodified _GQIEVVPEV_ ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3 62.57269311338072 0.0246576765497938 3 {NN|[MP]|[D{I|L}]|[EV]}QAVV 6 6 43.317 0.0 0.0 4.4725 0.0 0.0 0.0 340.150538738497 340.150538738497 18.09029246116821 0.0 0.0 0.0 0 0.8494850021680094 0.9208187539523752 0.3054621874040891 0.91944517631652 {NN|[MP]|[D{I|L}]|[EV]}QAVV 4.4725 - 947 1 1.164 91822.6 1.0 8918 5550 14453 HBL1_DMSO_200M_050219_1,14470 HBL1_DMSO_200M_050219_1,14470,GQIEVVPEV True True GQIEVVPEV 71.550907 485.265978991985 41314056.0 14453.0 ENSG00000118482|ENST00000262043|PHF3;;nc|ENSG00000118482|Q92576-2|PHF3 5.343221505482991 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14471 71.556 278.0 638920.0 25 0 55596.0 + 16318 IYFDHDLQSY 10 145 650.7960565535711 1299.5775601739422 2 650.7963744997978 MULTI CID FTMS 0 0 0 14453 723355.0625 0.4731140057950909 -2 0.1872024536132812 18 Unmodified _IYFDHDLQSY_ ENSG00000164252|ENST00000312916|AGGF1 137.42381684818497 0.0001758737001145 3 {I|L}YC[RH]{I|L}DMSY 10 5 + 98.718 0.0 0.0 7.5961 7.5961 82.074 0.0 0.0 0.0 35.528375589157804 15.026975159433531 15.026975159433531 1.020599913279625 0 1.2302046884880935 2.0 0.9027084789088669 1.305462187404089 {I|L}YC[RH]{I|L}DMSY;{I|L}YC{I|L}[RH]DMSY;{I|L}YC{I|L}[QA]DPQSY;[HD]D{M(Oxidation (M))|F}{I|L}Y{I|L}QSY;[HD]D{M(Oxidation (M))|F}Y{I|L}{I|L}QSY;{I|L}YC{I|L}[QA]Q[DP]SY;[HD]{M(Oxidation (M))|F}D{I|L}Y{I|L}QSY;{I|L}YC[RH]{M(Oxidation (M))|F}[DP]SY;[HD]{M(Oxidation (M))|F}DY{I|L}{I|L}QSY;[HD]D{M(Oxidation (M))|F}{I|L}YQ{I|L}SY 7.5961;7.5176;6.5259;6.297;6.2578;6.0876;6.0654;6.0273;6.0261;5.9001 -;-;-;-;-;-;-;-;-;- 12479 + 1 1.164 141741.0 1.0 8919 5550 14453 HBL1_DMSO_200M_050219_1,14471 HBL1_DMSO_200M_050219_1,14471,IYFDHDLQSY True True IYFDHDLQSY 71.556049 650.796374499798 29408736.0 14453.0 ENSG00000164252|ENST00000312916|AGGF1 7.740736961364746 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14472 71.558 69.0 472650.0 25 0 48125.0 + 19555 LFREISKLT 9 63 553.8305305936672 1105.6465082541342 2 553.8309814333916 MULTI CID FTMS 0 0 0 14453 662517.1875 0.3131253482690643 3 -0.1778793334960937 19 Unmodified _LFREISKLT_ REV__ENSG00000083168|ENST00000265713|KAT6A 4.75600775471527 0.7486543447549536 3 {I|L} 1 -1 11.259 0.0 0.0 1.0183 0.0 0.0 974.5513677285468 0.0 974.5513677285468 0.0 0.6631278263729534 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0183 + + 27 + 1 1.164 34543.1 1.0 8920 5550 14453 HBL1_DMSO_200M_050219_1,14472 HBL1_DMSO_200M_050219_1,14472,LFREISKLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14473 71.559 64.0 1399800.0 25 0 141300.0 + 6303 DVHIQINSI 9 121 519.7820470350872 1037.5495411369743 2 519.7824584841728 MULTI CID FTMS 0 0 0 14453 674532.875 1.0 0 0.0 20 Unmodified _DVHIQINSI_ ENSG00000189050|ENST00000305783|RNFT1;ENST00000477207.2_1_17:58039882-58042045:-|nuORF;ENST00000586083.5_1_17:58037427-58042045:-|nuORF;nc|ENSG00000189050|Q5M7Z0-2|RNFT1;nc|ENSG00000189050|Q5M7Z0-3|RNFT1 38.17557092003332 0.0854718145212029 3 {[TV]|[{I|L}S]}[YT]Q{I|L}NS{I|L} 9 3 + 60.084 0.0 0.0 5.791 5.791 79.648 0.0 0.0 0.0 2.9698372174895127 13.15552802072581 2.9698372174895127 2.9698372174895127 0 0.9247425010840048 1.5228787452803376 0.1505149978319906 0.0 {[TV]|[{I|L}S]}[YT]Q{I|L}NS{I|L};[HV]D{I|L}Q{I|L}NS{I|L};{[TV]|[{I|L}S]}[YT]{I|L}QNS{I|L};[HV]D{I|L}{I|L}QNS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]Q{I|L}NS{I|L};{[TV]|[{I|L}S]}[YT][AG]{I|L}NS{I|L};{[TV]|[{I|L}S]}[YT]Q{I|L}GGS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}QNS{I|L};[HV]D{I|L}Q{I|L}GGS{I|L};[HV]D{I|L}[AG]{I|L}NS{I|L} 5.791;5.5047;5.5008;5.2146;5.102;4.9035;4.9035;4.8119;4.6172;4.6172 -;-;-;-;-;-;-;-;-;- 1356 1 1.164 71968.5 1.0 8921 5550 14453 HBL1_DMSO_200M_050219_1,14473 HBL1_DMSO_200M_050219_1,14473,DVHIQINSI True True DVHIQINSI 71.559265 519.782458484173 5538857.0 14453.0 nc|ENSG00000189050|Q5M7Z0-3|RNFT1;;ENST00000477207.2_1_17:58039882-58042045:-|nuORF;;nc|ENSG00000189050|Q5M7Z0-2|RNFT1;;ENSG00000189050|ENST00000305783|RNFT1;;ENST00000586083.5_1_17:58037427-58042045:-|nuORF 4.591179847717285 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14475 71.563 50.0 1449400.0 25 0 233010.0 + 41238 VPFVGKVHI 9 94 332.5395527618367 994.5968288857102 3 332.5393249392509 MULTI CID FTMS 0 0 0 14474 340046.84375 0.3188679531685013 2 -0.1440353393554687 1 Unmodified _VPFVGKVHI_ ENSG00000131979|ENST00000491895|GCH1;nc|ENSG00000131979|P30793-2|GCH1;nc|ENSG00000131979|P30793-3|GCH1;nc|ENSG00000131979|P30793-4|GCH1 26.88365393820708 0.1891292719743517 3 VP{M(Oxidation (M))|F}VGKVH{I|L} 9 0 + 62.624 0.0 0.0 6.2964 6.2964 93.124 0.0 0.0 0.0 46.42628738053766 10.968878562567532 10.968878562567532 62.6241749634216 0 0.3252574989159953 0.721246399047171 0.0 0.0 + + VP{M(Oxidation (M))|F}VGKVH{I|L} 6.2964 + + 307 + 1 1.164 61952.2 1.0 8922 5551 14474 HBL1_DMSO_200M_050219_1,14475 HBL1_DMSO_200M_050219_1,14475,VPFVGKVHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14476 71.565 83.0 1169100.0 25 0 139950.0 30015 QTLEQLLQPI 10 133 394.8962164725943 1181.666820017983 3 394.8959228396416 MULTI CID FTMS 0 0 0 14474 527360.8125 0.1393629544340578 5 -0.4457550048828125 2 Unmodified _QTLEQLLQPI_ ENSG00000186281|ENST00000434632|GPAT2;ENST00000471757.5_1_2:96691131-96693504:-|nuORF;ENST00000484440.5_1_2:96688852-96698107:-|nuORF;ENST00000486463.5_1_2:96687909-96693504:-|nuORF;nc|ENSG00000186281|Q6NUI2-3|GPAT2;nc|ENSG00000186281|Q6NUI2-5|GPAT2;nc|ENSG00000186281|Q6NUI2|GPAT2 24.881564428377168 0.4096545554397951 3 [Q{I|L}]KDD{I|L}K 7 7 48.949 0.0 0.0 4.1424 0.0 0.0 0.0 338.1746074537829 338.1746074537829 8.564366098612851 0.0 0.0 0.0 0 1.2302046884880935 0.0 1.4604093769761874 0.8897727294836955 [Q{I|L}]KDD{I|L}K 4.1424 - 1009 1 1.164 79164.8 1.0 8923 5551 14474 HBL1_DMSO_200M_050219_1,14476 HBL1_DMSO_200M_050219_1,14476,QTLEQLLQPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14477 71.566 1.9 16620000.0 25 0 2283000.0 5988 DRHDLIAGI 9 66 505.2746962679951 1008.5348396027904 2 505.2752563357353 MULTI CID FTMS 0 0 0 14474 13227732.0 0.8096768009307922 2 -0.1440353393554687 3 Unmodified _DRHDLIAGI_ ENSG00000080493|ENST00000264485|SLC4A4;nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;nc|ENSG00000080493|Q9Y6R1-3|SLC4A4;nc|ENSG00000080493|Q9Y6R1-4|SLC4A4;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4 13.90604991867851 0.4602628045680013 3 N{I|L}{I|L}Q{I|L} 5 6 26.708 0.0 0.0 2.6482 0.0 0.0 409.17122084785314 0.0 409.17122084785314 0.0 13.213337517843655 0.0 0.0 0 0.218765315847925 0.0 0.0 0.3807196863200844 N{I|L}{I|L}Q{I|L} 2.6482 - 26 1 1.164 31382.6 1.0 8924 5551 14474 HBL1_DMSO_200M_050219_1,14477 HBL1_DMSO_200M_050219_1,14477,DRHDLIAGI False True SANHNILQI 71.566374 505.275256335735 162388672.0 14474.0 ENST00000432525.5_1_22:38886367-38903636:-|nuORF;;ENST00000581551.1_1_17:62499042-62499524:-|nuORF;;nc|ENSG00000100201|Q92841-1|DDX17;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5;;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;;ENSG00000100201|ENST00000403230|DDX17;;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;;nc|ENSG00000100201|Q92841-3|DDX17;;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;;nc|ENSG00000100201|Q92841-2|DDX17 4.553895473480225 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14478 71.568 11.0 2401600.0 25 0 218910.0 -1 IVFLMFTL 8 60 500.2834025835691 0 500.2837097048759 PEAK CID FTMS 0 0 0 14474 2213443.5 0.9758106521918828 -1 0.033843994140625 4 Oxidation (M) _IVFLM(Oxidation (M))FTL_ ENSG00000115488|ENST00000233840|NEU2 10.183394434864962 0.5394990767616434 3 V 1 -1 3.0989 0.0 0.0 0.31034 0.0 0.0 814.3942454974133 82.06695734195546 896.4612028393688 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.31034 + + 4 + 1 1.164 25638.9 1.0 8925 5551 14474 HBL1_DMSO_200M_050219_1,14478 HBL1_DMSO_200M_050219_1,14478,IVFLMFTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14479 71.572 257.0 516090.0 25 0 35579.0 + 2171 AQAEVYKELRL 11 121 660.3697913079432 1318.7250296826862 2 660.3698608279228 MULTI CID FTMS 0 0 0 14474 646684.375 1.0 0 0.0 5 Unmodified _AQAEVYKELRL_ ENSG00000169710|ENST00000306749|FASN 89.19311807128302 0.0008197596942677 3 AQAEVYKE{I|L}R{I|L} 11 0 + 115.27 0.0 0.0 8.7412 8.7412 96.853 0.0 0.0 0.0 94.30301862932552 13.56094019351076 13.56094019351076 18.33668578233474 0 2.524227503252014 0.9208187539523752 0.3807196863200844 1.174742501084005 + + AQAEVYKE{I|L}R{I|L};A[AG]AEVYKE{I|L}R{I|L};AQ{I|L}WYKE{I|L}R{I|L};AQ{I|L}{[DA]|[EG]}YKE{I|L}R{I|L};AQAEV{[VA]|[{I|L}G]}{[{M(Oxidation (M))|F}C]|[YS]}{I|L}R{I|L};AQAE{I|L}R{[{M(Oxidation (M))|F}C]|[YS]}{I|L}R{I|L};A[AG]{I|L}WYKE{I|L}R{I|L};AQAE{I|L}[VG]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}R{I|L};A[AG]{I|L}{[DA]|[EG]}YKE{I|L}R{I|L};AQAEV{I|L}[RH][VP]S{I|L} 8.7412;7.3507;7.0243;6.3294;6.2653;5.805;5.6311;5.1128;4.9389;4.8284 +;-;-;-;-;-;-;-;-;- + 832 + 1 1.164 103291.4 1.0 8926 5551 14474 HBL1_DMSO_200M_050219_1,14479 HBL1_DMSO_200M_050219_1,14479,AQAEVYKELRL True True AQAEVYKELRL 71.572338 660.369860827923 4405250.0 14474.0 ENSG00000169710|ENST00000306749|FASN 7.240693728129069 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14480 71.578 286.0 252490.0 25 0 27899.0 -1 0 82 905.9401266512108 1809.8657003692217 2 906.4423705935478 MULTI CID FTMS 0 0 0 14474 533659.25 0.0410531463058309 8 -0.7239761352539062 6 3 [VP]V[QA]{[MS]|[{M(Oxidation (M))|F}A]}KV{M(Oxidation (M))|F}{I|L} 11 -1 35.41 0.0 0.0 1.9565 0.0 0.0 0.0 607.1653831639275 607.1653831639275 23.191998208952327 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.7742275032520141 0.0 [VP]V[QA]{[MS]|[{M(Oxidation (M))|F}A]}KV{M(Oxidation (M))|F}{I|L} 1.9565 - 410 1 1.164 52930.1 1.0 8927 5551 14474 HBL1_DMSO_200M_050219_1,14480 HBL1_DMSO_200M_050219_1,14480, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14481 71.58 89.0 795770.0 25 0 149930.0 + 4939 DGLVLVKV 8 93 421.771042822027 841.5275327108541 2 421.7711364626884 MULTI CID FTMS 0 0 0 14474 402756.4375 0.0839870113634539 -4 0.2703399658203125 7 Unmodified _DGLVLVKV_ REV__ENSG00000144840|ENST00000273375|RABL3;REV__ENST00000491398.5_1_3:120457479-120461354:-|nuORF 34.10243960390752 0.3329570729325616 3 [DG]{I|L}V{I|L}VKV 8 -1 [DG]{I|L} + + 38.756 12.676 4.4457 4.6054 4.6054 54.357 0.0 0.0 0.0 0.0 22.724928274552592 0.0 0.0 0 0.805462187404089 0.0 0.0 0.2742275032520141 [DG]{I|L}V{I|L}VKV 4.6054 + + 111 + 1 1.164 59606.2 1.0 8928 5551 14474 HBL1_DMSO_200M_050219_1,14481 HBL1_DMSO_200M_050219_1,14481,DGLVLVKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14482 71.581 33.0 1012200.0 25 0 90743.0 + 25226 MVATQYELV 9 67 527.2677912746994 1052.5210296161988 2 527.2682983279228 MULTI CID FTMS 0 0 0 14474 321669.34375 0.009246616765343 17 -1.6162109375 8 Unmodified _MVATQYELV_ REV__ENSG00000184432|ENST00000333188|COPB2;REV__nc|ENSG00000184432|P35606-2|COPB2 10.073929032068715 0.563993802247229 3 MV 2 -1 44.024 0.0 0.0 4.1827 0.0 0.0 0.0 819.3894137018186 819.3894137018186 32.91447825603967 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 MV 4.1827 + + 58 + 1 1.164 37611.2 1.0 8929 5551 14474 HBL1_DMSO_200M_050219_1,14482 HBL1_DMSO_200M_050219_1,14482,MVATQYELV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14483 71.584 170.0 677750.0 25 0 84053.0 + 2402 AQPQIVVL 8 123 434.2687401636614 866.5229273941228 2 434.2687866091728 MULTI CID FTMS 0 0 0 14474 319004.5625 0.2341972353008005 4 -0.32440185546875 9 Unmodified _AQPQIVVL_ ENSG00000158077|ENST00000299481|NLRP14 24.67388899826682 0.525179942228231 3 [QP]QAV{I|L}V{I|L} 8 3 + 33.792 0.0 0.0 3.8997 3.8997 73.912 0.0 0.0 0.0 3.055074169904444 19.187522094009 3.055074169904444 3.0102999566398125 0 0.6677353201839438 0.0 0.0 0.25 [QP]QAV{I|L}V{I|L};[QP]QA{I|L}VV{I|L};[QP]QVA{I|L}V{I|L};[QP][AG]AV{I|L}V{I|L};[QP][AG]A{I|L}VV{I|L};[QA][PG]AV{I|L}V{I|L};[QP][AG]VA{I|L}V{I|L};[QA][PG]A{I|L}VV{I|L};[QA][PG]VA{I|L}V{I|L};[QA][QP]V{I|L}V{I|L} 3.8997;3.5523;3.408;2.8308;2.4834;2.4834;2.3391;2.136;1.9917;1.7358 -;-;-;-;-;-;-;-;-;- 151 1 1.164 94233.9 1.0 8930 5551 14474 HBL1_DMSO_200M_050219_1,14483 HBL1_DMSO_200M_050219_1,14483,AQPQIVVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14484 71.592 429.0 314720.0 25 0 50321.0 -1 0 68 1166.0929998707409 2330.171446808282 2 1166.592456042767 MULTI CID FTMS 0 0 0 14474 237569.921875 0.9879217281670531 1 -0.0528030395507812 10 3 {I|L}EVK{I|L}[TA]SV 9 -1 27.305 0.0 0.0 1.1718 0.0 0.0 1148.5067262045693 238.0837038629516 1386.5904300675209 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 {I|L}EVK{I|L}[TA]SV 1.1718 - 878 + 1 1.164 88200.6 1.0 8931 5551 14474 HBL1_DMSO_200M_050219_1,14484 HBL1_DMSO_200M_050219_1,14484, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14485 71.598 364.0 149810.0 25 0 30888.0 -1 0 75 844.2982055544853 0 844.2982055544853 PEAK CID FTMS 0 0 0 -1 0 11 3 {I|L}VD 3 -1 17.747 0.0 0.0 1.0523 0.0 0.0 1088.2526478259642 268.1287935846313 1356.3814414105957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.0 {I|L}VD 1.0523 - 128 + 1 1.164 42562.7 1.0 8932 5551 14474 HBL1_DMSO_200M_050219_1,14485 HBL1_DMSO_200M_050219_1,14485, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14486 71.605 380.0 410530.0 25 0 81462.0 -1 0 114 1003.4000962635832 3007.178459390949 3 1004.069689929485 MULTI CID FTMS 0 0 0 14474 210905.375 0.8435753142515448 -1 0.033843994140625 12 3 [EP]TVNN{M(Oxidation (M))|F}A{I|L} 9 -1 22.638 0.0 0.0 0.7528 0.0 0.0 0.0 2018.680021240812 2018.680021240812 9.384045842072297 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.9436726795685342 [EP]TVNN{M(Oxidation (M))|F}A{I|L} 0.7528 - 5058 1 1.164 120227.4 1.0 8933 5551 14474 HBL1_DMSO_200M_050219_1,14486 HBL1_DMSO_200M_050219_1,14486, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14487 71.612 378.0 156650.0 25 0 8140.3 -1 0 96 762.6572407523083 2284.9498928571247 3 762.6571533083916 MULTI CID FTMS 0 0 0 14474 189689.53125 1.0 0 0.0 13 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[WK]DHM 7 -1 29.044 0.0 0.0 1.2711 0.0 0.0 0.0 1290.5353170116748 1290.5353170116748 9.58052549271557 0.0 0.0 0.0 0 0.0 2.0 0.6747425010840047 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[WK]DHM 1.2711 - 452 1 1.164 51611.1 1.0 8934 5551 14474 HBL1_DMSO_200M_050219_1,14487 HBL1_DMSO_200M_050219_1,14487, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14489 71.616 5.1 6266000.0 25 0 1097000.0 + 9110 FFPDKPITQY 10 46 628.3215495725626 1254.6285462119251 2 628.3218871951103 MULTI CID FTMS 0 0 0 14488 8287859.0 0.2574249955847507 11 -1.042999267578125 1 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 18.373094154950223 0.5392593366289069 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P][QT]Y 10 0 + 30.463 0.0 0.0 2.428 2.428 70.959 0.0 0.0 0.0 14.978109286651248 5.764837301042718 5.764837301042718 3.0102999566398125 0 0.3807196863200844 0.0 0.0 0.0 + + {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P][QT]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}][QT]Y 2.428;2.1881 +;- + 63 + 1 1.149 28126.2 1.0 8935 5552 14488 HBL1_DMSO_200M_050219_1,14489 HBL1_DMSO_200M_050219_1,14489,FFPDKPITQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14490 71.617 3.8 8835200.0 25 0 788820.0 + 2314 AQIKEMVEL 9 66 530.7890827109852 1059.5636124887703 2 530.7894775271416 MULTI CID FTMS 0 0 0 14488 12225414.0 1.0 0 0.0 2 Unmodified _AQIKEMVEL_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 36.506200033944 0.094635877243972 3 [QA]{I|L} 3 6 20.502 0.0 0.0 1.9349 0.0 0.0 0.0 744.3604319069922 744.3604319069922 0.3689310708045923 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.4247425010840047 + [QA]{I|L} 1.9349 + + 47 1 1.149 32948.2 1.0 8936 5552 14488 HBL1_DMSO_200M_050219_1,14490 HBL1_DMSO_200M_050219_1,14490,AQIKEMVEL True True AQIKEMVEL 71.617302 530.789477527142 329234784.0 14488.0 ENSG00000165280|ENST00000358901|VCP;;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 6.922130107879639 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14491 71.618 15.0 1041400.0 25 0 82345.0 15101 IMPRFLWI 8 43 538.3092303622403 1074.6039077912806 2 538.3091918826103 MULTI CID FTMS 0 0 0 14488 3088902.0 0.533934248811574 5 -0.4592437744140625 3 Unmodified _IMPRFLWI_ ENSG00000187187|ENST00000347077|ZNF546 0.7936320650641473 0.8195151834710337 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.149 19644.8 1.0 8937 5552 14488 HBL1_DMSO_200M_050219_1,14491 HBL1_DMSO_200M_050219_1,14491,IMPRFLWI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14492 71.62 18.0 1651300.0 25 0 326180.0 22790 LQSPPPLLPQ 10 55 545.3163856108691 1088.6182182885382 2 545.3174926638603 MULTI CID FTMS 0 0 0 14488 2859540.0 0.6277138999311379 5 -0.4592437744140625 4 Unmodified _LQSPPPLLPQ_ ENSG00000105287|ENST00000291281|PRKD2;nc|ENSG00000105287|Q9BZL6-3|PRKD2 1.4819007175156935 0.719781833666733 3 {M(Oxidation (M))|F} 1 10 3.9794 0.0 0.0 0.36555 0.0 0.0 747.4250247844351 191.0935457818969 938.518570566332 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.36555 - 1 + 1 1.149 28182.0 1.0 8938 5552 14488 HBL1_DMSO_200M_050219_1,14492 HBL1_DMSO_200M_050219_1,14492,LQSPPPLLPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14493 71.621 26.0 1998800.0 25 0 233090.0 + -1 MFRCTFDY 8 66 578.2332820812485 1154.4520112292969 2 578.2328979372978 MULTI CID FTMS 0 0 0 14488 1788289.875 0.397399560375775 1 -0.0912322998046875 5 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FRC(Carbamidomethyl (C))TFDY_ REV__ENST00000491694.1_1_3:111658417-111664240:+|nuORF 18.13498045792455 0.6430038125133779 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}V][WC(Carbamidomethyl (C))]SY 8 -1 + 30.555 0.0 0.0 2.6467 2.6467 80.784 0.0 0.0 0.0 9.312704667817666 6.77469246433537 6.77469246433537 16.844471979274186 0 0.7059771852360797 1.6989700043360187 0.6382104921644451 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}V][WC(Carbamidomethyl (C))]SY;[NP]T{NN|[MP]|[D{I|L}]|[EV]}[WC(Carbamidomethyl (C))]SY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RN]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RN]{[YD]|[{M(Oxidation (M))|F}M]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 2.6467;1.1876;0.77237;0.4266 -;-;-;- 112 + 1 1.149 44937.7 1.0 8939 5552 14488 HBL1_DMSO_200M_050219_1,14493 HBL1_DMSO_200M_050219_1,14493,MFRCTFDY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14494 71.622 33.0 1445700.0 25 0 119840.0 + 2320 AQIKPFYTV 9 87 533.8005141194802 1065.5864753057604 2 533.8005859255791 MULTI CID FTMS 0 0 0 14488 1263679.625 0.7979757125605609 -1 0.0528030395507812 6 Unmodified _AQIKPFYTV_ ENSG00000155096|ENST00000337198|AZIN1;ENST00000522311.1_1_8:103848756-103855898:-|nuORF 43.85829265575387 0.0542763391141878 3 TV 2 7 27.519 0.0 0.0 2.5825 0.0 0.0 847.4591539940401 0.0 847.4591539940401 0.0 -0.7306842758111998 -0.7306842758111998 0.0 0 0.5 0.0 0.3054621874040891 0.0 + TV 2.5825 + + 141 + 1 1.149 42354.8 1.0 8940 5552 14488 HBL1_DMSO_200M_050219_1,14494 HBL1_DMSO_200M_050219_1,14494,AQIKPFYTV True True AQIKPFYTV 71.622017 533.800585925579 39165659.375 14488.0 ENST00000522311.1_1_8:103848756-103855898:-|nuORF;;ENSG00000155096|ENST00000337198|AZIN1 8.288721084594727 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14495 71.623 46.0 832160.0 25 0 106120.0 -1 IQSLMLKSL 9 83 524.8085839636628 1047.6026149941256 2 524.8096191287041 MULTI CID FTMS 0 0 0 14488 920438.0 0.4273059216264437 -5 0.3231430053710937 7 Oxidation (M) _IQSLM(Oxidation (M))LKSL_ ENSG00000188992|ENST00000681601|LIPI;nc|ENSG00000188992|Q6XZB0-2|LIPI;nc|ENSG00000188992|Q6XZB0-3|LIPI;nc|ENSG00000188992|Q6XZB0-4|LIPI;nc|ENSG00000188992|Q6XZB0-5|LIPI;nc|ENSG00000188992|Q6XZB0-8|LIPI 19.256988751693697 0.3154191944385105 3 [Q{I|L}]PY{[TV]|[{I|L}S]}KS{I|L} 9 -1 [Q{I|L}]PY{[TV]|[{I|L}S]}K + + 20.846 -1.3379 -0.1613 1.9899 1.9899 48.826 0.0 0.0 0.0 0.0 9.252261260283046 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 [Q{I|L}]PY{[TV]|[{I|L}S]}KS{I|L} 1.9899 - 59 + 1 1.149 38140.4 1.0 8941 5552 14488 HBL1_DMSO_200M_050219_1,14495 HBL1_DMSO_200M_050219_1,14495,IQSLMLKSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14496 71.628 230.0 1510200.0 25 0 118250.0 -1 HEGCSYTMCP 10 230 592.7117735031193 1183.4089940730385 2 593.2136108279228 MULTI CID FTMS 0 0 0 14488 732512.125 0.3420823034063361 1 -0.0912322998046875 8 Carbamidomethyl (C) _HEGC(Carbamidomethyl (C))SYTMCP_ ENSG00000111077|ENST00000314250|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;nc|ENSG00000111077|Q63HR2-2|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;nc|ENSG00000111077|Q63HR2-5|TNS2;nc|ENSG00000111077|Q63HR2-6|TNS2;TNS2|p.D1025Rfs*40|1|0.44|ENSG00000111077|chr12:53060971-53060972|-/C|frameshift_variant 6.2057823575117 0.6979311171683138 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))C(Carbamidomethyl (C)){[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y[SG] 9 -1 + 22.437 0.0 0.0 1.896 1.896 68.045 0.0 0.0 0.0 6.322866057470833 0.1968827284615883 0.1968827284615883 1.5836249209524915 0 0.0 2.0 0.3494850021680094 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))C(Carbamidomethyl (C)){[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y[SG];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}E]C(Carbamidomethyl (C))KY[SG];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))T[HD][TP];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))C(Carbamidomethyl (C)){NN|[MP]|[D{I|L}]|[EV]}[YC(Carbamidomethyl (C))];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}E][CG]KY[SG];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}DC(Carbamidomethyl (C))C(Carbamidomethyl (C))[YC(Carbamidomethyl (C))] 1.896;1.7622;1.0666;1.0042;0.98405;0.86369 -;-;-;-;-;- 738 1 1.149 249194.6 1.0 8942 5552 14488 HBL1_DMSO_200M_050219_1,14496 HBL1_DMSO_200M_050219_1,14496,HEGCSYTMCP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14497 71.633 311.0 810800.0 25 0 50199.0 + 6082 DSQILPKI 8 182 457.2712833509268 912.5280137686536 2 457.2709228396416 MULTI CID FTMS 0 0 0 14488 484694.65625 0.0414980006981193 11 -1.042999267578125 9 Unmodified _DSQILPKI_ ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF 71.13359017698441 0.1103988542940256 3 NPV{I|L}TEK{I|L} 8 5 + 52.16 0.0 0.0 5.7159 5.7159 78.123 0.0 0.0 0.0 12.3070872335457 11.40978057358332 11.40978057358332 1.956649119863528 0 0.1914339689053026 0.0 0.75 0.1421590589602531 NPV{I|L}TEK{I|L};NSE{I|L}{I|L}PK{I|L};{[DS]|[MA]|[CV]|TT}Q{I|L}{I|L}PK{I|L};N{I|L}[VP]TEK{I|L};NSE{I|L}{I|L}{I|L}[KP];N{I|L}[{I|L}T]DPK{I|L};{[DS]|[MA]|[CV]|TT}[AG]{I|L}{I|L}PK{I|L};NPV{I|L}T[{I|L}T]GV;[VP]{I|L}[KT]E{I|L}N;{[DS]|[MA]|[CV]|TT}Q{I|L}{I|L}{I|L}[KP] 5.7159;5.5015;4.7121;4.0404;3.9507;3.7707;3.6971;3.4493;3.1866;3.1613 -;-;+;-;-;-;-;-;-;- + 952 + 1 1.149 195865.8 1.0 8943 5552 14488 HBL1_DMSO_200M_050219_1,14497 HBL1_DMSO_200M_050219_1,14497,DSQILPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14498 71.639 328.0 379650.0 25 0 12599.0 -1 0 141 873.9146498260742 1745.8147467189483 2 874.4192993044853 MULTI CID FTMS 0 0 0 14488 375456.1875 0.311226538329109 5 -0.4592437744140625 10 3 [MN]VVTAQ[{M(Oxidation (M))|F}T]AN{I|L}D[WH] 15 -1 + 61.116 0.0 0.0 3.5007 3.5007 69.641 0.0 0.0 0.0 2.062986467913852 24.57447378615772 2.062986467913852 1.015515467194838 0 0.7302046884880938 1.5228787452803376 1.2302046884880935 0.3252574989159953 [MN]VVTAQ[{M(Oxidation (M))|F}T]AN{I|L}D[WH];[MN]VVTA[{M(Oxidation (M))|F}T]AGAN{I|L}D[WH];[NP]{I|L}N[HV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GAN{I|L}D[YC(Carbamidomethyl (C))];[MN]VVTA[{M(Oxidation (M))|F}T]AQN{I|L}D[WH];[NP]{I|L}N[HV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QN{I|L}D[YC(Carbamidomethyl (C))];[MN]VVTA[{M(Oxidation (M))|F}T]QAN{I|L}D[WH];[NP]{I|L}[YQ][YR]GAN{I|L}D[WH];[NP]{I|L}[YQ][{M(Oxidation (M))|F}T]AGAN{I|L}D[WH];[NP]{I|L}{[DS]|[MA]|[CV]|TT}A{I|L}[HS]GAN{I|L}D[WH];[NP]{I|L}N[PS]{I|L}[QA]GAN{I|L}D[YC(Carbamidomethyl (C))] 3.5007;3.4426;3.2772;3.2307;3.0665;3.0582;3.0102;2.9966;2.9872;2.9667 -;-;-;-;-;-;-;-;-;- 21529 1 1.149 85141.8 1.0 8944 5552 14488 HBL1_DMSO_200M_050219_1,14498 HBL1_DMSO_200M_050219_1,14498, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14499 71.646 389.0 583490.0 25 0 105060.0 -1 0 141 341.7469171339709 681.4792813347419 2 341.7467529177666 MULTI CID FTMS 0 0 0 14488 351676.84375 0.2059946931054668 -4 0.2738494873046875 11 3 {I|L}{I|L}{I|L}PVK 6 -1 + 61.135 0.0 0.0 8.9709 8.9709 83.257 0.0 0.0 0.0 34.69273760456403 0.5115252244738144 0.5115252244738144 0.5115252244738144 0 0.4666152729074456 2.0 0.0 0.2134679910804404 {I|L}{I|L}{I|L}PVK;{I|L}{I|L}{I|L}PKV;{I|L}{I|L}{I|L}VPK;{I|L}{I|L}V{I|L}PK;{I|L}{I|L}PK{I|L}V;{I|L}{I|L}VKP{I|L};{I|L}{I|L}PKV{I|L} 8.9709;8.8958;7.8904;6.3068;5.5698;5.3412;4.8938 -;-;-;-;-;-;- 115 + 1 1.149 183250.4 1.0 8945 5552 14488 HBL1_DMSO_200M_050219_1,14499 HBL1_DMSO_200M_050219_1,14499, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14500 71.652 332.0 648960.0 25 0 83313.0 8313 EREAILQV 8 195 479.2728033869282 956.5310538406565 2 479.2721740603447 MULTI CID FTMS 0 0 0 14488 363626.78125 0.3864765810820308 6 -0.6310577392578125 12 Unmodified _EREAILQV_ ENSG00000164674|ENST00000611299|SYTL3;nc|ENSG00000164674|Q4VX76-2|SYTL3 30.22481116460888 0.4082965392918993 3 {[VA]|[{I|L}G]}GN[SG]{I|L} 7 8 29.474 0.0 0.0 3.0813 0.0 0.0 0.0 355.198875456144 355.198875456144 13.67168539542085 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3054621874040891 0.8494850021680094 {[VA]|[{I|L}G]}GN[SG]{I|L} 3.0813 - 767 1 1.149 166240.4 1.0 8946 5552 14488 HBL1_DMSO_200M_050219_1,14500 HBL1_DMSO_200M_050219_1,14500,EREAILQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14501 71.66 417.0 747890.0 25 0 71081.0 -1 0 190 320.211539464139 319.204262997539 1 320.2112304568291 MULTI CID FTMS 0 0 0 14488 317795.6875 0.0471597180944336 31 -2.4799118041992188 13 3 HP 2 -1 34.168 0.0 0.0 10.704 0.0 0.0 0.0 82.06701837711171 82.06701837711171 3.946888185338509 0.0 0.0 0.0 0 0.6421590589602532 1.154901959985743 0.0 0.0 HP 10.704 - 22 + 1 1.149 249036.8 1.0 8947 5552 14488 HBL1_DMSO_200M_050219_1,14501 HBL1_DMSO_200M_050219_1,14501, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14502 71.667 392.0 321790.0 25 0 45250.0 + 21903 LPPGSHTLL 9 138 467.7714589396702 933.5283649461404 2 467.7706786990166 MULTI CID FTMS 0 0 0 14488 208156.734375 0.0065092204784427 21 -1.8193511962890625 14 Unmodified _LPPGSHTLL_ REV__ENSG00000198689|ENST00000630721|SLC9A6;REV__nc|ENSG00000198689|Q92581-1|SLC9A6;REV__nc|ENSG00000198689|Q92581-3|SLC9A6;REV__nc|ENSG00000198689|Q92581|SLC9A6 24.67388899826682 0.2172451872415813 3 [{I|L}P][YN]TT{I|L}{I|L} 8 -1 [{I|L}P][YN]TT + + 22.959 2.7074 0.39275 2.4594 2.4594 49.321 0.0 0.0 0.0 0.0 7.474250108400469 0.0 0.0 0 0.5 0.0 0.0 0.0 [{I|L}P][YN]TT{I|L}{I|L} 2.4594 - 311 + 1 1.149 100689.1 1.0 8948 5552 14488 HBL1_DMSO_200M_050219_1,14502 HBL1_DMSO_200M_050219_1,14502,LPPGSHTLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14503 71.673 336.0 263540.0 25 0 20854.0 + 8748 EVQNHFQCL 9 141 559.2584665160913 1116.5023800989825 2 559.2528564333916 MULTI CID FTMS 0 0 0 -1 0 15 Unmodified _EVQNHFQCL_ REV__ENSG00000153395|ENST00000283415|LPCAT1;REV__ENST00000513757.5_1_5:1479693-1494872:-|nuORF 11.640296217721598 0.521594087909532 3 {[TV]|[{I|L}S]}W 3 -1 21.354 0.0 0.0 1.9126 0.0 0.0 0.0 727.2905935601731 727.2905935601731 3.5967474863433573 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.4698565171985375 0.0 {[TV]|[{I|L}S]}W 1.9126 - 629 1 1.149 72290.3 1.0 8949 5552 14488 HBL1_DMSO_200M_050219_1,14503 HBL1_DMSO_200M_050219_1,14503,EVQNHFQCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14504 71.682 430.0 657420.0 25 0 61741.0 + 39260 VAAPPSIQI 9 221 448.2662821445896 894.5180113559792 2 448.2673522830009 MULTI CID FTMS 0 0 0 14488 201284.75 0.2202609313144592 6 -0.6310577392578125 16 Unmodified _VAAPPSIQI_ ENSG00000119650|ENST00000314067|IFT43;nc|ENSG00000119650|Q96FT9-2|IFT43 54.773552608820026 0.0299037012502309 3 [PS]P{I|L}Q{I|L}Q{I|L} 8 5 + 20.727 0.0 0.0 2.3171 2.3171 69.686 0.0 0.0 0.0 0.479362282867811 -0.6729781147810421 -0.6729781147810421 2.3274011463309847 0 0.9291746928241126 0.1426675035687315 1.3175549639449295 0.0 [PS]P{I|L}Q{I|L}Q{I|L};[VP][TP]Q{I|L}Q{I|L};[PS]P{I|L}[AG]{I|L}Q{I|L};[VP][TP][AG]{I|L}Q{I|L};[{I|L}P][PS]Q{I|L}Q{I|L};[{I|L}P]QPS{I|L}Q{I|L};[PS]P{I|L}VAAQ{I|L};[VP][TP]VAAQ{I|L};[PA]AVPS{I|L}Q{I|L};{[VA]|[{I|L}G]}[VP][TP]AQ{I|L} 2.3171;2.0569;1.2816;1.0215;1.0085;0.78401;0.77549;0.5153;0.39329;0.024915 -;-;-;-;-;-;-;-;-;- 231 1 1.149 217595.0 1.0 8950 5552 14488 HBL1_DMSO_200M_050219_1,14504 HBL1_DMSO_200M_050219_1,14504,VAAPPSIQI True True VAAPPSIQI 71.681629 448.267 9267381.0 14488.0 ENSG00000119650|ENST00000314067|IFT43;;nc|ENSG00000119650|Q96FT9-2|IFT43 4.809070587158203 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14505 71.693 664.0 145570.0 25 0 5041.2 + 6489 EAIGFATTV 9 118 908.4704309244738 907.4631544578738 1 908.4720947146416 MULTI CID FTMS 0 0 0 14488 159527.234375 0.0979677071118247 -4 0.2738494873046875 17 Unmodified _EAIGFATTV_ ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-2|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2 88.90359156742426 0.0153595091083554 3 {[CP]|[EA]}AVG{I|L}SYV 9 6 + 55.039 0.0 0.0 6.0652 6.0652 77.437 0.0 0.0 0.0 12.299471318670292 23.843858768306497 12.299471318670292 0.9044035926377418 0 0.3252574989159953 0.0 1.1643943297944483 0.0 {[CP]|[EA]}AVG{I|L}SYV;{[CP]|[EA]}AVGSY{I|L}V;{[CP]|[EA]}AVGS{I|L}YV;{[CP]|[EA]}AV{M(Oxidation (M))|F}ATTV;{[CP]|[EA]}{I|L}GG{I|L}SYV;{[CP]|[EA]}{I|L}GGSY{I|L}V;{[CP]|[EA]}{I|L}GGS{I|L}YV;{[CP]|[EA]}AVG[YV]TV;{[CP]|[EA]}AVGSYV{I|L};{[CP]|[EA]}{I|L}G{M(Oxidation (M))|F}ATTV 6.0652;5.9655;5.9436;5.6571;5.2949;5.1953;5.1734;5.1341;5.0828;4.8868 -;-;-;-;-;-;-;-;-;+ + 3466 1 1.149 63789.1 1.0 8951 5552 14488 HBL1_DMSO_200M_050219_1,14505 HBL1_DMSO_200M_050219_1,14505,EAIGFATTV True True EAIGFATTV 71.693204 908.472094714642 11431735.0 14488.0 nc|ENSG00000024048|Q8IWV8|UBR2;;nc|ENSG00000024048|Q8IWV8-2|UBR2;;ENSG00000024048|ENST00000372901|UBR2 3.695356527964274 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14506 71.703 566.0 229520.0 25 0 52144.0 -1 0 134 655.0558831509642 0 655.3330566287041 PEAK CID FTMS 0 0 0 -1 0 18 3 HVEVW 5 -1 14.992 0.0 0.0 1.1461 0.0 0.0 533.7272925697033 121.02998529605702 654.7572778657603 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HVEVW 1.1461 - 126 + 1 1.149 98813.1 1.0 8952 5552 14488 HBL1_DMSO_200M_050219_1,14506 HBL1_DMSO_200M_050219_1,14506, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14508 71.707 5.0 9309900.0 25 0 1180500.0 + 4969 DGRIFGESI 9 70 497.2538976333373 992.4932423334748 2 497.2541381716728 MULTI CID FTMS 0 0 0 14507 11724257.0 1.0 0 0.0 1 Unmodified _DGRIFGESI_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35;nc|ENSG00000163002|Q8NFH5-3|NUP35 34.93206674587334 0.1032771302489716 3 {I|L}{M(Oxidation (M))|F}GES{I|L} 6 3 57.652 0.0 0.0 5.8088 0.0 0.0 328.15034682441564 0.0 328.15034682441564 0.0 23.170693164140133 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + {I|L}{M(Oxidation (M))|F}GES{I|L} 5.8088 + + 419 1 1.153 42716.2 1.0 8953 5553 14507 HBL1_DMSO_200M_050219_1,14508 HBL1_DMSO_200M_050219_1,14508,DGRIFGESI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14509 71.709 6.8 4741100.0 25 0 288910.0 + 17384 KMIEDLQNEL 10 66 616.8131122269399 1231.6116715206797 2 616.8134033083916 MULTI CID FTMS 0 0 0 14507 8385993.5 1.0 0 0.0 2 Unmodified _KMIEDLQNEL_ ENSG00000198887|ENST00000361138|SMC5 90.13494162714682 0.0093239051209448 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QNE{I|L} 10 0 + 88.206 0.0 0.0 7.1618 7.1618 90.702 0.0 0.0 0.0 6.517412290202671 39.74083050537587 6.517412290202671 9.164539485499262 0 0.4247425010840047 0.0 1.174742501084005 1.5044321917401078 + + {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QNE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QGGE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}[AG]NE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}[AG]GGE{I|L};[Q{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}QNE{I|L};[Q{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}QGGE{I|L};[Q{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}[AG]NE{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}][{M(Oxidation (M))|F}V]QNE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}QN{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L};[VP]{[WT]|[RM]}[{M(Oxidation (M))|F}V]QNE{I|L} 7.1618;6.4177;6.4177;5.6766;5.6058;4.8617;4.8617;3.3085;3.2227;3.2067 +;-;-;-;-;-;-;-;-;- + 586 1 1.153 33527.0 1.0 8954 5553 14507 HBL1_DMSO_200M_050219_1,14509 HBL1_DMSO_200M_050219_1,14509,KMIEDLQNEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14510 71.71 29.0 1704000.0 25 0 198220.0 + -1 MFDEHCQCV 9 93 592.7117735031193 1183.4089940730385 2 592.7116577029228 MULTI CID FTMS 0 0 0 14507 1545299.625 0.6953398427621733 2 -0.1803665161132812 3 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FDEHCQC(Carbamidomethyl (C))V_ REV__ENSG00000120332|ENST00000239462|TNN 4.75600775471527 0.7486543447549536 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))T 5 -1 23.468 0.0 0.0 1.9831 0.0 0.0 0.0 465.1596403955572 465.1596403955572 8.77513725768253 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))T 1.9831 - 39 1 1.153 40925.5 1.0 8955 5553 14507 HBL1_DMSO_200M_050219_1,14510 HBL1_DMSO_200M_050219_1,14510,MFDEHCQCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14511 71.711 29.0 2483100.0 25 0 145070.0 41452 VPLMKTTEI 9 121 516.2950471203401 1030.57554130748 2 516.2955200076103 MULTI CID FTMS 0 0 0 14507 1090379.5 0.5850021832703747 -3 0.1778793334960937 4 Unmodified _VPLMKTTEI_ ENSG00000108384|ENST00000337432|RAD51C;ENST00000475762.5_1_17:56772326-56801433:+|nuORF;ENST00000487921.5_1_17:56769962-56783250:+|nuORF;nc|ENSG00000108384|O43502-2|RAD51C 19.438996006549623 0.310492472477042 3 [VP]M{I|L}P{M(Oxidation (M))|F} 6 6 32.976 0.0 0.0 3.1997 0.0 0.0 0.0 343.2160891635989 343.2160891635989 12.218035200300008 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [VP]M{I|L}P{M(Oxidation (M))|F} 3.1997 - 263 1 1.153 63209.3 1.0 8956 5553 14507 HBL1_DMSO_200M_050219_1,14511 HBL1_DMSO_200M_050219_1,14511,VPLMKTTEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14512 71.712 54.0 1733600.0 25 0 241340.0 + 21669 LPLLPGRTV 9 84 483.3106918947211 964.6068308562424 2 483.3109619021416 MULTI CID FTMS 0 0 0 14507 935097.25 0.2197605399765715 -3 0.1778793334960937 5 Unmodified _LPLLPGRTV_ ENSG00000129566|ENST00000262715|TEP1;nc|ENSG00000129566|Q99973-2|TEP1 53.832793166522166 0.0319663582346103 3 {I|L}P{I|L}{I|L}P{[NV]|[RG]}TV 9 0 + 79.778 0.0 0.0 8.2705 8.2705 88.312 0.0 0.0 0.0 31.59047512557485 4.259687322722812 4.259687322722812 4.259687322722812 0 1.5 1.6989700043360187 0.5242275032520141 0.3494850021680094 + + {I|L}P{I|L}{I|L}P{[NV]|[RG]}TV;{I|L}P{I|L}{I|L}P{[NV]|[RG]}S{I|L};{I|L}P{I|L}{I|L}P[WK]V;{I|L}P{I|L}{I|L}V[KP]W 8.2705;7.8289;7.5501;7.185 +;-;-;- + 198 + 1 1.153 77179.3 1.0 8957 5553 14507 HBL1_DMSO_200M_050219_1,14512 HBL1_DMSO_200M_050219_1,14512,LPLLPGRTV True True LPLLPGRTV 71.712279 483.310961902142 72299168.0 14507.0 ENSG00000129566|ENST00000262715|TEP1;;nc|ENSG00000129566|Q99973-2|TEP1 6.063100337982178 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14513 71.718 328.0 649520.0 25 0 141410.0 -1 0 74 1144.8080559618163 3431.402338485649 3 1145.142749011517 MULTI CID FTMS 0 0 0 14507 902243.5 0.0410815379581575 9 -0.9125823974609376 6 3 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.31967 0.0 0.0 1108.389595420999 2115.931263319881 3224.320858740881 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.31967 - 57 + 1 1.153 172094.8 1.0 8958 5553 14507 HBL1_DMSO_200M_050219_1,14513 HBL1_DMSO_200M_050219_1,14513, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14514 71.72 64.0 1444000.0 25 0 154740.0 + 35591 STVEALQNL 9 117 487.7612270997155 973.507901266231 2 487.7614318728447 MULTI CID FTMS 0 0 0 14507 782236.4375 0.4155622389617271 3 -0.3017196655273437 7 Unmodified _STVEALQNL_ ENSG00000143401|ENST00000583931|ANP32E;nc|ENSG00000143401|Q9BTT0-3|ANP32E 77.98433622928108 0.0180125044636492 3 {NN|[MP]|[D{I|L}]|[EV]}ATS{I|L} 6 5 33.641 0.0 0.0 3.4557 0.0 0.0 0.0 370.17065696374976 370.17065696374976 10.14120888403346 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.1382104921644451 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}ATS{I|L} 3.4557 - 707 1 1.153 74351.5 1.0 8959 5553 14507 HBL1_DMSO_200M_050219_1,14514 HBL1_DMSO_200M_050219_1,14514,STVEALQNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14515 71.722 124.0 793470.0 25 0 91929.0 + 38852 TVIPLNERL 9 110 527.8158752701955 1053.617197607191 2 527.8161498904228 MULTI CID FTMS 0 0 0 14507 408378.21875 0.6771525514013703 -3 0.1778793334960937 8 Unmodified _TVIPLNERL_ ENSG00000189057|ENST00000343597|FAM111B;nc|ENSG00000189057|Q6SJ93-2|FAM111B 53.832793166522166 0.0319663582346103 3 {[TV]|[{I|L}S]}{I|L}{I|L}[WQ]{I|L}D 8 5 49.742 0.0 0.0 4.7211 0.0 0.0 0.0 82.06699548892811 82.06699548892811 36.64320017660792 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.6861818737241735 {[TV]|[{I|L}S]}{I|L}{I|L}[WQ]{I|L}D 4.7211 - 212 + 1 1.153 81445.4 1.0 8960 5553 14507 HBL1_DMSO_200M_050219_1,14515 HBL1_DMSO_200M_050219_1,14515,TVIPLNERL True True TVIPLNERL 71.722387 527.816149890423 8645299.0 14507.0 ENSG00000189057|ENST00000343597|FAM111B;;nc|ENSG00000189057|Q6SJ93-2|FAM111B 1.4658570289611816 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14516 71.726 175.0 882950.0 25 0 121100.0 + 3051 AVLGGKLYV 9 138 460.2841603485024 918.5537677638048 2 460.2842590212822 MULTI CID FTMS 0 0 0 14507 405906.65625 0.4002094496168882 -2 0.1440353393554687 9 Unmodified _AVLGGKLYV_ ENSG00000162413|ENST00000377658|KLHL21 50.855029805455786 0.0384952370514206 3 {[VA]|[{I|L}G]}{I|L}GGK{I|L}YV 9 0 + 62.66 0.0 0.0 6.8216 6.8216 89.472 0.0 0.0 0.0 30.80075608481181 10.406075122407684 10.406075122407684 9.09256854528806 0 1.360924374808178 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}{I|L}GGK{I|L}YV;{[VA]|[{I|L}G]}{I|L}NK{I|L}YV;{[VA]|[{I|L}G]}{I|L}GGK[YV]{I|L};{[VA]|[{I|L}G]}{I|L}GKG{I|L}[YV];{[VA]|[{I|L}G]}KG{I|L}G{I|L}[YV];{[VA]|[{I|L}G]}GK{I|L}G{I|L}[YV];{[VA]|[{I|L}G]}{I|L}NK[YV]{I|L};{[VA]|[{I|L}G]}G{I|L}KG{I|L}[YV];{[VA]|[{I|L}G]}AVKG{I|L}[YV];[KG]G{I|L}{I|L}G{I|L}[YV] 6.8216;5.8318;4.838;4.4922;4.1645;3.9906;3.8481;3.4961;3.3693;2.4075 +;-;-;-;-;-;-;-;-;- + 916 + 1 1.153 121764.5 1.0 8961 5553 14507 HBL1_DMSO_200M_050219_1,14516 HBL1_DMSO_200M_050219_1,14516,AVLGGKLYV True True AVLGGKLYV 71.725787 460.284259021282 9234251.0 14507.0 ENSG00000162413|ENST00000377658|KLHL21 4.35927136739095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14517 71.736 591.0 390450.0 25 0 23426.0 + 9159 FGCTGCCFI 9 210 475.6819065690312 949.3492602048624 2 475.6821472048759 MULTI CID FTMS 0 0 0 14507 284274.28125 0.2280772682648563 7 -0.6374359130859375 10 Unmodified _FGCTGCCFI_ REV__ENSG00000237515|ENST00000558583|SHISA9;REV__nc|ENSG00000237515|B4DS77-2|SHISA9;REV__nc|ENSG00000237515|B4DS77-3|SHISA9 16.942295170755138 0.3780752226737986 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D{M(Oxidation (M))|F}D{M(Oxidation (M))|F} 7 -1 + 44.402 0.0 0.0 4.6771 4.6771 85.514 0.0 0.0 0.0 15.185139398778873 13.934625873455737 13.934625873455737 15.185139398778873 0 0.0 2.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D{M(Oxidation (M))|F}D{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YD{M(Oxidation (M))|F}D{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}D{M(Oxidation (M))|F};{M(Oxidation (M))|F}G[DC]{[{M(Oxidation (M))|F}H]|[RQ]}QP;{[QD]|[EN]|[WG]|[KD]|[RS]}{[{M(Oxidation (M))|F}H]|[RQ]}[DC]GE;{M(Oxidation (M))|F}[C(Carbamidomethyl (C))D]{[{M(Oxidation (M))|F}H]|[RQ]}QP;{M(Oxidation (M))|F}[C(Carbamidomethyl (C))D][WH]W;{M(Oxidation (M))|F}G[DC][WH]W;{[QD]|[EN]|[WG]|[KD]|[RS]}{[{M(Oxidation (M))|F}H]|[RQ]}[C(Carbamidomethyl (C))D]E;[VG]S{[{M(Oxidation (M))|F}H]|[RQ]}[DC]W 4.6771;3.0776;1.3208;1.1999;1.0324;0.753;0.74929;0.65054;0.58546;0.31885 -;-;-;-;-;-;-;-;-;- 825 1 1.153 175000.7 1.0 8962 5553 14507 HBL1_DMSO_200M_050219_1,14517 HBL1_DMSO_200M_050219_1,14517,FGCTGCCFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14518 71.746 534.0 694070.0 25 0 45129.0 + 25957 NLPDEIYHV 9 247 550.2740614993681 1098.5335700655362 2 550.2735473513603 MULTI CID FTMS 0 0 0 14507 262454.9375 0.0272601180705995 11 -1.1294174194335938 11 Unmodified _NLPDEIYHV_ ENSG00000148335|ENST00000372483|NTMT1 44.40701690623563 0.0526327925666318 3 {I|L}NPGTKMCHV 10 7 + 65.083 0.0 0.0 5.9245 5.9245 76.131 0.0 0.0 0.0 33.980173058690816 4.605444068138517 4.605444068138517 0.418862209619121 0 0.3054621874040891 2.0 0.3807196863200844 0.6139829889124311 {I|L}NPGTKMCHV;{I|L}NPDE{I|L}YHV;{I|L}NPDE{I|L}[HV]Y;{I|L}NPGTD{[WT]|[RM]}PV;{I|L}NPDH[Y{I|L}]D{I|L};{I|L}NPDH[Y{I|L}]EV;{I|L}NPDH{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L};{I|L}NPGQP{[YD]|[{M(Oxidation (M))|F}M]}PV;{I|L}NPGTD[WP]S{I|L};{I|L}NPDE{I|L}[KP]{[CA]|SS} 5.9245;5.8864;5.0288;4.5068;4.4087;4.2921;4.0941;4.0664;4.0298;3.9835 -;-;-;-;-;-;-;-;-;- 11386 + 1 1.153 276580.1 1.0 8963 5553 14507 HBL1_DMSO_200M_050219_1,14518 HBL1_DMSO_200M_050219_1,14518,NLPDEIYHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14519 71.757 659.0 339810.0 25 0 87718.0 -1 0 73 1162.797886063532 3485.371828790796 3 1163.128832995892 MULTI CID FTMS 0 0 0 14507 216847.078125 0.0030997797765126 -6 0.4143753051757812 12 3 GYCV 4 -1 12.652 0.0 0.0 0.36299 0.0 0.0 1943.6790320152083 1116.4763887994752 3060.155420814684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYCV 0.36299 - 87 + 1 1.153 180114.4 1.0 8964 5553 14507 HBL1_DMSO_200M_050219_1,14519 HBL1_DMSO_200M_050219_1,14519, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14520 71.767 563.0 225560.0 25 0 10987.0 -1 EEEDMYMNM 9 183 604.2024304088828 1206.3903078845656 2 604.7051269412041 MULTI CID FTMS 0 0 0 14507 207665.625 0.6717202955597603 -1 0.0912322998046875 13 Oxidation (M) _EEEDMYM(Oxidation (M))NM_ ENSG00000036054|ENST00000394144|TBC1D23;ENST00000486274.5_1_3:99980342-100042509:+|nuORF;nc|ENSG00000036054|Q9NUY8-2|TBC1D23 2.059750862983233 0.8427793054688888 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EV 4 -1 21.771 0.0 0.0 1.8046 0.0 0.0 0.0 731.1340267168499 731.1340267168499 2.3610816498327765 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EV 1.8046 - 882 1 1.153 92584.3 1.0 8965 5553 14507 HBL1_DMSO_200M_050219_1,14520 HBL1_DMSO_200M_050219_1,14520,EEEDMYMNM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14521 71.778 604.0 157090.0 25 0 20888.0 -1 0 98 890.3243313855323 0 890.3225585818291 PEAK CID FTMS 0 0 0 14507 174082.625 1.0 0 0.0 14 3 CAV{I|L}NE{I|L} 7 -1 48.84 0.0 0.0 2.7459 0.0 0.0 786.1408061198699 247.1204775445922 1033.261283664462 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9634679910804403 0.7134679910804405 CAV{I|L}NE{I|L} 2.7459 - 414 + 1 1.153 65962.4 1.0 8966 5553 14507 HBL1_DMSO_200M_050219_1,14521 HBL1_DMSO_200M_050219_1,14521, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14522 71.789 585.0 175740.0 25 0 17028.0 + 2300 AQIEAKFYEEV 11 157 663.8323021107948 1325.6500512883897 2 663.8310424685478 MULTI CID FTMS 0 0 0 14507 166889.1875 0.3180709197352541 4 -0.368011474609375 15 Unmodified _AQIEAKFYEEV_ ENSG00000187109|ENST00000618691|NAP1L1;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1 42.83518252547288 0.1687213420692654 3 [QA]{I|L}Y{I|L}YEEV[QA] 11 6 + 55.812 0.0 0.0 4.2101 4.2101 79.043 0.0 0.0 0.0 9.495723549052038 3.872735630574091 3.872735630574091 6.535471014684084 0 1.0 0.638272163982407 0.2742275032520141 0.4247425010840047 [QA]{I|L}Y{I|L}YEEV[QA];[QA]{I|L}Y{I|L}YE[QA]{NN|[MP]|[D{I|L}]|[EV]};[QA]{I|L}Y[YE]{I|L}EV[QA];[QA]{I|L}{[{M(Oxidation (M))|F}D]|MM}Y{I|L}{M(Oxidation (M))|F}NPV;[QA]{I|L}Y[YE]E{I|L}V[QA];[QA]{I|L}{[{M(Oxidation (M))|F}D]|MM}Y{M(Oxidation (M))|F}{I|L}NPV;[QA]{I|L}EA[YQ][Y{I|L}]EV;[QA]{I|L}Y[YE]{I|L}[QA]{NN|[MP]|[D{I|L}]|[EV]};[QA]{I|L}Y{I|L}Y[PS]WW;{[TV]|[{I|L}S]}Q{M(Oxidation (M))|F}{I|L}YEEV[QA] 4.2101;3.7171;3.5896;3.4938;3.4222;3.2668;3.1915;3.0966;3.0742;2.9762 -;-;-;-;-;-;-;-;-;- 2972 1 1.153 82532.4 1.0 8967 5553 14507 HBL1_DMSO_200M_050219_1,14522 HBL1_DMSO_200M_050219_1,14522,AQIEAKFYEEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14523 71.798 484.0 199450.0 25 0 9805.7 -1 IMVVSCICWS 10 153 635.7877368430943 0 635.7883178591728 PEAK CID FTMS 0 0 0 14507 162256.84375 1.0 0 0.0 16 2 Carbamidomethyl (C),Oxidation (M) _IM(Oxidation (M))VVSC(Carbamidomethyl (C))IC(Carbamidomethyl (C))WS_ ENSG00000160951|ENST00000292513|PTGER1 20.453626601364224 0.2946171403104198 3 {I|L} 1 -1 6.9897 0.0 0.0 0.55056 0.0 0.0 915.3358382500904 238.12008081607652 1153.4559190661669 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.55056 + + 55 + 1 1.153 79043.5 1.0 8968 5553 14507 HBL1_DMSO_200M_050219_1,14523 HBL1_DMSO_200M_050219_1,14523,IMVVSCICWS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14524 71.801 152.0 605640.0 25 0 56841.0 34532 SPAPPLLHV 9 117 465.7748720190064 929.5351911048128 2 465.7740966677666 MULTI CID FTMS 0 0 0 14507 145667.421875 0.2026162000200992 6 -0.5799407958984375 17 Unmodified _SPAPPLLHV_ ENSG00000158941|ENST00000308511|CCAR2;nc|ENSG00000158941|Q8N163-2|CCAR2 18.13498045792455 0.3457906370836843 3 {M(Oxidation (M))|F}GA[YG]TV 7 7 26.559 0.0 0.0 2.8573 0.0 0.0 216.20335624328783 0.0 216.20335624328783 0.0 6.364454955861266 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 {M(Oxidation (M))|F}GA[YG]TV 2.8573 - 684 + 1 1.153 78314.7 1.0 8969 5553 14507 HBL1_DMSO_200M_050219_1,14524 HBL1_DMSO_200M_050219_1,14524,SPAPPLLHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14525 71.809 505.0 358550.0 25 0 14497.0 + 30904 RISGETIFVTA 11 199 597.3307361082191 1192.646919283238 2 597.3295776247978 MULTI CID FTMS 0 0 0 14507 140110.734375 0.0465764709358161 6 -0.5799407958984375 18 Unmodified _RISGETIFVTA_ ENSG00000141367|ENST00000269122|CLTC;ENST00000472129.3_1_17:57725612-57733400:+|nuORF;nc|ENSG00000141367|Q00610-2|CLTC 9.530100786504857 0.8301842989142968 3 [{I|L}V]GSWT{I|L}{M(Oxidation (M))|F}V[TA] 11 4 + 39.033 0.0 0.0 3.2728 3.2728 70.954 0.0 0.0 0.0 2.104866741732323 5.862435673934279 2.104866741732323 2.104866741732323 0 0.5 0.8239087409443188 0.3054621874040891 0.0 [{I|L}V]GSWT{I|L}{M(Oxidation (M))|F}V[TA];[PA]V{I|L}V[YN]{M(Oxidation (M))|F}V[TA];[{I|L}V]GD{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}V[TA];{[VA]|[{I|L}G]}P{I|L}V[YN]{M(Oxidation (M))|F}V[TA];{[TV]|[{I|L}S]}[VG]WT{I|L}{M(Oxidation (M))|F}V[TA];[PA]V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L}{M(Oxidation (M))|F}V[TA];[{I|L}T]AAWT{I|L}{M(Oxidation (M))|F}V[TA];{[VA]|[{I|L}G]}VSWT{I|L}{M(Oxidation (M))|F}V[TA];[{I|L}P]G{I|L}V[YN]{M(Oxidation (M))|F}V[TA];[VP]A{I|L}V[YN]{M(Oxidation (M))|F}V[TA] 3.2728;3.0963;2.7723;2.7675;2.7498;2.7;2.5191;2.4776;2.4398;2.3858 -;-;-;-;-;-;-;-;-;- 2182 1 1.153 135199.6 1.0 8970 5553 14507 HBL1_DMSO_200M_050219_1,14525 HBL1_DMSO_200M_050219_1,14525,RISGETIFVTA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14526 71.822 684.0 342890.0 25 0 28889.0 + 9162 FGEHCQCL 8 219 468.68748102383154 935.3604091144632 2 468.6862670779228 MULTI CID FTMS 0 0 0 14507 142651.0625 0.350460348134558 12 -1.1814346313476562 19 Unmodified _FGEHCQCL_ REV__ENSG00000132561|ENST00000254898|MATN2;REV__nc|ENSG00000132561|O00339-2|MATN2;REV__nc|ENSG00000132561|O00339-3|MATN2;REV__nc|ENSG00000132561|O00339-4|MATN2 24.67388899826682 0.525179942228231 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YC(Carbamidomethyl (C))C(Carbamidomethyl (C))TV 7 -1 + 20.629 0.0 0.0 2.2054 2.2054 49.025 0.0 0.0 0.0 1.5125139103437988 0.0 0.0 0.0 0 0.1271595765414318 0.5528419686577808 0.805462187404089 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YC(Carbamidomethyl (C))C(Carbamidomethyl (C))TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YC(Carbamidomethyl (C))C(Carbamidomethyl (C))S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{[C(Carbamidomethyl (C))G]|[NC]}CTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{[C(Carbamidomethyl (C))G]|[NC]}CS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YC(Carbamidomethyl (C))C(Carbamidomethyl (C)){I|L}S;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YSC(Carbamidomethyl (C))C(Carbamidomethyl (C)){I|L};{NN|[MP]|[D{I|L}]|[EV]}[Y{M(Oxidation (M))|F}]YDT;[VP]S{[QG]|[NA]}[C(Carbamidomethyl (C))C]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{[C(Carbamidomethyl (C))G]|[NC]}C{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}[Y{M(Oxidation (M))|F}]D[YT] 2.2054;2.2054;1.8216;1.8216;1.4218;1.3198;1.0947;1.0724;1.0379;0.7127 -;-;-;-;-;-;-;-;-;- 995 + 1 1.153 176511.7 1.0 8971 5553 14507 HBL1_DMSO_200M_050219_1,14526 HBL1_DMSO_200M_050219_1,14526,FGEHCQCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14527 71.836 799.0 237520.0 25 0 25684.0 + 33271 SFPEHRVLSF 10 149 406.88019467397936 1217.618754622138 3 406.8803588747978 MULTI CID FTMS 0 0 0 14507 110678.4140625 0.214356299705602 9 -0.9125823974609376 20 Unmodified _SFPEHRVLSF_ ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2 29.84058131909904 0.2982332456971691 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV[K{I|L}]{M(Oxidation (M))|F} 10 4 + 53.65 0.0 0.0 4.4062 4.4062 79.656 0.0 0.0 0.0 6.012196779647638 5.8771376077312 5.8771376077312 6.549471895720984 0 0.3252574989159953 2.0 1.055462187404089 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV[K{I|L}]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}SV[K{I|L}]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}W[K{I|L}]{M(Oxidation (M))|F};[RN]ES{I|L}V{I|L}M{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[RN]ES{I|L}V{I|L}[C(Carbamidomethyl (C))D]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}W[K{I|L}]{M(Oxidation (M))|F};[RN]ES{I|L}V{I|L}{[C(Carbamidomethyl (C))E]|[WC]}V;[RN]ES{I|L}V{[RE]|[WV]}C{I|L};[WY]H{I|L}V{I|L}M{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YV]ESV[K{I|L}]{M(Oxidation (M))|F} 4.4062;3.8683;3.3947;3.2765;2.9357;2.8207;2.6885;2.5052;2.4939;2.4541 -;-;-;-;-;-;-;-;-;- 611 + 1 1.153 149019.5 1.0 8972 5553 14507 HBL1_DMSO_200M_050219_1,14527 HBL1_DMSO_200M_050219_1,14527,SFPEHRVLSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14529 71.841 4.3 10963000.0 25 0 1237900.0 + 17810 KQLDDLKVEL 10 84 600.8452342256743 1199.6759155181485 2 600.8457519412041 MULTI CID FTMS 0 0 0 14528 9195941.0 0.0273670944658642 8 -0.7793807983398438 1 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 72.58957779350692 0.0188532062702481 3 [KQ]{I|L}DD{I|L}KVE{I|L} 10 0 + 80.583 0.0 0.0 6.7171 6.7171 82.996 0.0 0.0 0.0 0.7918124604762511 37.437106056797376 0.7918124604762511 3.0102999566398125 0 2.234636880228201 0.0 0.4247425010840047 0.7614393726401688 + + [KQ]{I|L}DD{I|L}KVE{I|L};[KQ]{I|L}DD{I|L}VKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}KQKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}VKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}KQVKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L}VKE{I|L};[K{I|L}]QDD{I|L}KVE{I|L};[K{I|L}]QDD{I|L}VKE{I|L} 6.7171;6.4662;6.0611;5.8686;5.8101;5.8101;5.6177;5.5592;5.5399;5.289 +;-;-;-;-;-;-;-;-;- + 2196 1 1.153 41795.8 1.0 8973 5554 14528 HBL1_DMSO_200M_050219_1,14529 HBL1_DMSO_200M_050219_1,14529,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14530 71.842 5.0 8508700.0 25 0 1206000.0 + 17819 KQLDDLKVEL 10 74 400.8994160702367 1199.67641881091 3 400.8994933962822 MULTI CID FTMS 0 0 0 14528 6136487.5 0.0296922944939685 10 -0.9962158203125 2 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 23.96415052054722 0.4302674029938662 3 {NN|[MP]|[D{I|L}]|[EV]}QKD{I|L}K 7 7 37.484 0.0 0.0 3.1245 0.0 0.0 0.0 356.1823141568663 356.1823141568663 23.504114322122547 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}QKD{I|L}K 3.1245 - 123 1 1.153 37633.6 1.0 8974 5554 14528 HBL1_DMSO_200M_050219_1,14530 HBL1_DMSO_200M_050219_1,14530,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14531 71.843 7.0 3677500.0 25 0 408810.0 + 44432 YMIDPSGVSY 10 47 566.2550379169405 1130.495522900681 2 566.2554199099541 MULTI CID FTMS 0 0 0 14528 6249899.0 0.3114101527329547 2 -0.16851806640625 3 Unmodified _YMIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 11.640296217721598 0.652229146672156 3 SY 2 8 24.024 0.0 0.0 2.1251 0.0 0.0 862.3890908711872 0.0 862.3890908711872 0.0 15.061624577948612 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + SY 2.1251 + + 21 + 1 1.153 27310.4 1.0 8975 5554 14528 HBL1_DMSO_200M_050219_1,14531 HBL1_DMSO_200M_050219_1,14531,YMIDPSGVSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14532 71.844 20.0 3858200.0 25 0 458530.0 -1 YMTWMKMM 8 67 585.2287704033185 1168.442987873437 2 585.2289916872978 MULTI CID FTMS 0 0 0 14528 2965941.5 0.5361598699018388 1 -0.0471649169921875 4 3 Oxidation (M) _YMTWM(Oxidation (M))KM(Oxidation (M))M(Oxidation (M))_ ENST00000445215.5_1_22:42995765-42998001:-|nuORF 12.531546534597751 0.7257836412119636 3 YM 2 -1 42.831 0.0 0.0 3.6656 0.0 0.0 0.0 871.3131197565061 871.3131197565061 25.356668758921828 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YM 3.6656 + + 44 + 1 1.153 65340.1 1.0 8976 5554 14528 HBL1_DMSO_200M_050219_1,14532 HBL1_DMSO_200M_050219_1,14532,YMTWMKMM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14533 71.845 17.0 3404100.0 25 0 440580.0 + 38311 TQILSVPKV 9 75 492.8081498552613 983.6017467773228 2 492.8082763552666 MULTI CID FTMS 0 0 0 14528 2737418.75 0.6648613273661219 -3 0.2772369384765625 5 Unmodified _TQILSVPKV_ nc|ENSG00000120802|P42166|TMPO 34.93206674587334 0.1032771302489716 3 [QT]{I|L}{I|L}SVPKV 9 0 + 56.257 0.0 0.0 5.7195 5.7195 87.998 0.0 0.0 0.0 42.21729866817746 8.461149292312129 8.461149292312129 10.688812894078126 0 0.9247425010840048 1.0969100130080565 0.0 0.0 + + [QT]{I|L}{I|L}SVPKV;[QT]{I|L}{I|L}SVV[KP];{I|L}{I|L}SKS{I|L}{I|L}[NP];[QT]{I|L}{I|L}SK[VP]V 5.7195;4.6328;4.3273;3.9922 +;-;-;- + 122 + 1 1.153 52606.6 1.0 8977 5554 14528 HBL1_DMSO_200M_050219_1,14533 HBL1_DMSO_200M_050219_1,14533,TQILSVPKV True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14534 71.846 15.0 3056600.0 25 0 326890.0 + 42238 VSLLVQRTI 9 64 514.8268323977959 1027.6391118623917 2 514.8270751833916 MULTI CID FTMS 0 0 0 14528 2666965.5 0.9357530716746302 -1 0.1332015991210937 6 Unmodified _VSLLVQRTI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 45.739877483867886 0.0497104363764649 3 VS{I|L}{I|L}VQ 6 3 71.631 0.0 0.0 6.9704 0.0 0.0 0.0 385.2205599420532 385.2205599420532 45.688812894078126 0.0 0.0 0.0 0 1.3494850021680094 1.3979400086720375 0.0 0.0 + VS{I|L}{I|L}VQ 6.9704 + + 245 + 1 1.153 40487.8 1.0 8978 5554 14528 HBL1_DMSO_200M_050219_1,14534 HBL1_DMSO_200M_050219_1,14534,VSLLVQRTI True True VSLLVQRTI 71.846455 514.827075183392 28523940.0 14528.0 ENST00000397415.7_1_6:42848808-42854199:+|nuORF;;ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 4.062965631484985 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14535 71.848 16.0 2493400.0 25 0 151880.0 + 3989 DALRPPLQNI 10 75 568.8250783070122 1135.6356036808245 2 568.8248168826103 MULTI CID FTMS 0 0 0 14528 2511401.75 0.3288302729470054 -3 0.2772369384765625 7 Unmodified _DALRPPLQNI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 49.55428908609986 0.0827668555218455 3 {[DA]|[EG]}{I|L}GV[HA]VGAD 11 8 55.482 0.0 0.0 4.8855 0.0 0.0 0.0 127.07946954081788 127.07946954081788 43.26329528578693 0.0 0.0 0.0 0 1.7302046884880935 1.6989700043360187 0.0 0.0 {[DA]|[EG]}{I|L}GV[HA]VGAD 4.8855 - 567 1 1.153 38775.7 1.0 8979 5554 14528 HBL1_DMSO_200M_050219_1,14535 HBL1_DMSO_200M_050219_1,14535,DALRPPLQNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14536 71.849 9.5 4024700.0 25 0 413310.0 + 13250 HIIENIVAV 9 78 504.297453868246 1006.580354803292 2 504.2978698611259 MULTI CID FTMS 0 0 0 14528 2282188.5 0.0313060361941413 7 -0.6999969482421875 8 Unmodified _HIIENIVAV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 21.74664581756881 0.2544899275067181 3 TNQQTV 6 7 16.036 0.0 0.0 1.5931 0.0 0.0 317.24388126989203 0.0 317.24388126989203 0.0 4.609178215846656 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TNQQTV 1.5931 - 116 + 1 1.153 36210.8 1.0 8980 5554 14528 HBL1_DMSO_200M_050219_1,14536 HBL1_DMSO_200M_050219_1,14536,HIIENIVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14537 71.85 21.0 1448800.0 25 0 175940.0 + 26538 NVIFVSHLA 9 57 500.2834025835691 0 500.2834655642509 PEAK CID FTMS 0 0 0 14528 2172951.0 0.957959275893423 2 -0.16851806640625 9 Unmodified _NVIFVSHLA_ REV__ENST00000261574.9_1_13:98674434-98674554:+|nuORF 2.059750862983233 0.3444685223463734 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.153 30820.3 1.0 8981 5554 14528 HBL1_DMSO_200M_050219_1,14537 HBL1_DMSO_200M_050219_1,14537,NVIFVSHLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14538 71.851 28.0 2562100.0 25 0 341320.0 + 10051 FPQLNVKPT 9 102 522.2960028201737 1042.5774527071474 2 522.2960693240166 MULTI CID FTMS 0 0 0 14528 1790096.125 0.2577197682691008 7 -0.6999969482421875 10 Unmodified _FPQLNVKPT_ REV__EGFL6|p.M339Nfs*6|1|0.39|ENSG00000198759|chrX:13617962-13617963|-/A|frameshift_variant;REV__ENSG00000198759|ENST00000361306|EGFL6;REV__nc|ENSG00000198759|Q8IUX8-2|EGFL6 7.910154910731844 0.6385446671287552 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QQ 4 -1 10.221 0.0 0.0 0.98035 0.0 0.0 0.0 539.3282821351348 539.3282821351348 0.6880441494399925 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QQ 0.98035 - 72 1 1.153 59624.4 1.0 8982 5554 14528 HBL1_DMSO_200M_050219_1,14538 HBL1_DMSO_200M_050219_1,14538,FPQLNVKPT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14539 71.853 89.0 1222000.0 25 0 256460.0 -1 0 46 1168.4562519417725 3502.3469264255177 3 1169.454760730267 MULTI CID FTMS 0 0 0 14528 1738082.25 0.9194294200052926 -2 0.2244338989257812 11 3 YG 2 -1 10.969 0.0 0.0 0.31319 0.0 0.0 1797.5818640249302 1481.6437691929232 3279.225633217853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.31319 - 32 + 1 1.153 89180.7 1.0 8983 5554 14528 HBL1_DMSO_200M_050219_1,14539 HBL1_DMSO_200M_050219_1,14539, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14540 71.854 29.0 2465600.0 25 0 294320.0 44459 YMVYMFHY 8 77 577.2456207405156 1152.4766885478311 2 577.2458373904228 MULTI CID FTMS 0 0 0 14528 1249960.25 0.471411873489018 8 -0.7793807983398438 12 Unmodified _YMVYMFHY_ ENST00000509325.1_1_12:7719006-7719195:+|nuORF 17.086550045450526 0.6584923310065985 3 YM{I|L}DY[QA]SY 9 5 + 67.048 0.0 0.0 5.8177 5.8177 85.984 0.0 0.0 0.0 49.740918700215886 10.237731077138932 10.237731077138932 8.697887582883936 0 0.4247425010840047 1.6989700043360187 0.25 0.0 YM{I|L}DY[QA]SY;YM{I|L}D[NS][{M(Oxidation (M))|F}T]Y;YM{I|L}[C(Carbamidomethyl (C))R][{M(Oxidation (M))|F}T]Y;YM{I|L}D{[DS]|[MA]|[CV]|TT}[C(Carbamidomethyl (C))H]{I|L};YMY{NN|[MP]|[D{I|L}]|[EV]}[QA]SY;Y{M(Oxidation (M))|F}PDY[QA]SY;YMY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))E]|[WC]}{I|L};Y{M(Oxidation (M))|F}PD[NS][{M(Oxidation (M))|F}T]Y;YE{[ET]|[MV]}Y[QA]SY;Y{M(Oxidation (M))|F}P[C(Carbamidomethyl (C))R][{M(Oxidation (M))|F}T]Y 5.8177;5.063;4.5009;3.9341;3.9295;3.561;3.1108;2.8063;2.4172;2.2442 -;-;-;-;-;-;-;-;-;- 365 + 1 1.153 59929.4 1.0 8984 5554 14528 HBL1_DMSO_200M_050219_1,14540 HBL1_DMSO_200M_050219_1,14540,YMVYMFHY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14541 71.856 54.0 1496900.0 25 0 299700.0 27625 PLGAVRRS 8 86 428.2616896519712 854.5088263707423 2 428.2615844607353 MULTI CID FTMS 0 0 0 14528 979750.0 0.0644102385555382 7 -0.6999969482421875 13 Unmodified _PLGAVRRS_ ENST00000379982.7_1_5:95067096-95067162:+|nuORF 2.302733041254933 0.8103549651115762 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 1.153 67279.5 1.0 8985 5554 14528 HBL1_DMSO_200M_050219_1,14541 HBL1_DMSO_200M_050219_1,14541,PLGAVRRS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14542 71.857 58.0 830190.0 25 0 76056.0 + 16319 IYFDHDLQSY 10 70 650.7960565535711 1299.5775601739422 2 650.7963134646416 MULTI CID FTMS 0 0 0 14528 824386.75 0.5391942876143155 2 -0.16851806640625 14 Unmodified _IYFDHDLQSY_ ENSG00000164252|ENST00000312916|AGGF1 34.40172386719151 0.2166836008404837 3 [Y{I|L}]C[RH]{I|L}DMSY 10 5 + 64.307 0.0 0.0 4.9483 4.9483 86.675 0.0 0.0 0.0 36.22486274231747 15.026975159433531 15.026975159433531 16.989700043360187 0 0.805462187404089 2.0 0.6421590589602533 0.4247425010840047 [Y{I|L}]C[RH]{I|L}DMSY;[Y{I|L}]C[RH]{M(Oxidation (M))|F}[DP]SY;[HD]D{M(Oxidation (M))|F}{I|L}Y{I|L}Q{[{M(Oxidation (M))|F}C]|[YS]};[HD]D{M(Oxidation (M))|F}{I|L}YQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HD]{M(Oxidation (M))|F}D{I|L}Y{I|L}Q{[{M(Oxidation (M))|F}C]|[YS]};[HD]D{I|L}{M(Oxidation (M))|F}Y{I|L}Q{[{M(Oxidation (M))|F}C]|[YS]};[HD]{M(Oxidation (M))|F}D{I|L}YQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HD]D{M(Oxidation (M))|F}{I|L}QY{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HD]D{M(Oxidation (M))|F}{I|L}YQS[Y{I|L}];[HD]D{I|L}{M(Oxidation (M))|F}YQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 4.9483;3.641;3.0513;2.9158;2.6841;2.588;2.5486;2.5486;2.4534;2.4525 -;-;-;-;-;-;-;-;-;- 637 + 1 1.153 43577.2 1.0 8986 5554 14528 HBL1_DMSO_200M_050219_1,14542 HBL1_DMSO_200M_050219_1,14542,IYFDHDLQSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14543 71.858 30.0 957350.0 25 0 55060.0 + -1 PETSMLQTV 9 72 511.2457228511311 1020.4768927690624 2 511.2459899783134 MULTI CID FTMS 0 0 0 14528 677467.75 0.7505572495060385 -2 0.2244338989257812 15 Oxidation (M) _PETSM(Oxidation (M))LQTV_ REV__ENSG00000149503|ENST00000394818|INCENP;REV__ENST00000528037.1_1_11:61891511-61905356:+|nuORF;REV__nc|ENSG00000149503|Q9NQS7-2|INCENP 11.640296217721598 0.521594087909532 3 V 1 -1 11.259 0.0 0.0 1.1033 0.0 0.0 903.3975832371272 0.0 903.3975832371272 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1033 + + 35 + 1 1.153 28803.8 1.0 8987 5554 14528 HBL1_DMSO_200M_050219_1,14543 HBL1_DMSO_200M_050219_1,14543,PETSMLQTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14544 71.861 122.0 1077900.0 25 0 98485.0 + 35133 SQYQRFTYL 9 138 603.3011838634183 1204.5878147936364 2 603.3009521365166 MULTI CID FTMS 0 0 0 14528 673118.75 0.374421067342879 -2 0.2244338989257812 16 Unmodified _SQYQRFTYL_ ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-17|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1 63.22749603027936 0.0242951379232427 3 [YQ]R{M(Oxidation (M))|F}TNTY{I|L} 9 4 + 40.93 0.0 0.0 3.3979 3.3979 70.056 0.0 0.0 0.0 1.3883155269693646 1.3883155269693646 1.3883155269693646 1.3883155269693646 0 0.9876954943324544 0.0 0.7742275032520141 0.0 [YQ]R{M(Oxidation (M))|F}TNTY{I|L};{[QS]|[NT]}Y{I|L}[TA][H{I|L}]C(Carbamidomethyl (C)){I|L};{[QS]|[NT]}{I|L}[QA]W{I|L}SC(Carbamidomethyl (C)){I|L};[YQ]R{[QS]|[NT]}{M(Oxidation (M))|F}TY{I|L};{[QS]|[NT]}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KP]SC(Carbamidomethyl (C)){I|L};{[QS]|[NT]}Y{I|L}[TA][WH]S{I|L};{[QS]|[NT]}{I|L}[QA]W{I|L}C(Carbamidomethyl (C))S{I|L};[YQ]R{M(Oxidation (M))|F}TGGTY{I|L};{[QS]|[NT]}{I|L}[DV]{[QS]|[NT]}RC(Carbamidomethyl (C)){I|L};{[QS]|[NT]}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KP]C(Carbamidomethyl (C))S{I|L} 3.3979;3.2826;3.1518;3.0887;2.9867;2.7726;2.6418;2.6334;2.5716;2.4766 -;-;-;-;-;-;-;-;-;- 1341 1 1.153 96646.0 1.0 8988 5554 14528 HBL1_DMSO_200M_050219_1,14544 HBL1_DMSO_200M_050219_1,14544,SQYQRFTYL True True SQYQRFTYL 71.860922 603.300952136517 33279038.0 14528.0 nc|ENSG00000131196|O95644-10|NFATC1;;nc|ENSG00000131196|O95644-5|NFATC1;;ENSG00000131196|ENST00000427363|NFATC1;;nc|ENSG00000131196|O95644-11|NFATC1;;nc|ENSG00000131196|O95644-8|NFATC1;;nc|ENSG00000131196|O95644-2|NFATC1;;nc|ENSG00000131196|O95644-6|NFATC1;;nc|ENSG00000131196|O95644-4|NFATC1;;nc|ENSG00000131196|O95644-17|NFATC1;;nc|ENSG00000131196|O95644-3|NFATC1 6.824855804443359 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14545 71.863 88.0 1029500.0 25 0 138190.0 + 3093 AVPDEIPPLE 10 93 540.2848465386849 1078.5551401441696 2 540.2847778201103 MULTI CID FTMS 0 0 0 14528 635045.9375 0.0158034431170954 -5 0.4383468627929687 17 Unmodified _AVPDEIPPLE_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 24.881564428377168 0.4096545554397951 3 [DP]E{I|L}PP{I|L} 7 3 36.783 0.0 0.0 3.4104 0.0 0.0 0.0 314.13567178088607 314.13567178088607 -0.2434011917602774 0.0 -0.2434011917602774 0.0 0 0.0 0.958607314841775 0.3252574989159953 0.0 + [DP]E{I|L}PP{I|L} 3.4104 + + 391 1 1.153 77414.9 1.0 8989 5554 14528 HBL1_DMSO_200M_050219_1,14545 HBL1_DMSO_200M_050219_1,14545,AVPDEIPPLE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14546 71.866 173.0 690120.0 25 0 84016.0 + 27813 PLPSVPVLRE 10 132 553.8296007462391 1105.644648559278 2 553.8309203982353 MULTI CID FTMS 0 0 0 14528 387286.53125 0.3790949759298008 -3 0.2772369384765625 18 Unmodified _PLPSVPVLRE_ REV__ENSG00000124217|ENST00000244051|MOCS3 12.240655878213236 0.6421556946785427 3 {I|L}PVER{I|L} 6 -1 27.526 0.0 0.0 2.4896 0.0 0.0 380.20069498341394 0.0 380.20069498341394 0.0 16.929666057967925 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.4247425010840047 {I|L}PVER{I|L} 2.4896 - 177 + 1 1.153 97200.5 1.0 8990 5554 14528 HBL1_DMSO_200M_050219_1,14546 HBL1_DMSO_200M_050219_1,14546,PLPSVPVLRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14547 71.874 414.0 439220.0 25 0 34907.0 -1 MFRNMPEIL 9 210 591.7860237248004 1181.5574945164008 2 591.7863647341728 MULTI CID FTMS 0 0 0 14528 346233.34375 0.2288781193477502 2 -0.16851806640625 19 2 Oxidation (M) _M(Oxidation (M))FRNM(Oxidation (M))PEIL_ ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C;nc|ENSG00000152457|Q96SD1-4|DCLRE1C 15.847184025352805 0.4077185912009129 3 [MD]WDRAY{I|L}{I|L} 9 -1 + 43.163 0.0 0.0 3.6531 3.6531 81.164 0.0 0.0 0.0 1.0307688054491848 22.917469282411247 1.0307688054491848 9.561770092165233 0 1.7614393726401687 1.0969100130080565 0.0 0.0 [MD]WDRAY{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]}DRAY{I|L}{I|L};[MD]W[WR]Y{I|L}{I|L};[MD]WDR{I|L}{M(Oxidation (M))|F}S{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]}D[VG]AY{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C))[W{I|L}]AY{I|L}{I|L};[Y{I|L}]NSN[WC(Carbamidomethyl (C))]{I|L}{I|L};[Y{I|L}][WE][WC(Carbamidomethyl (C))]{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]}[WR]Y{I|L}{I|L};[QA]{[MG]|[TS]}C(Carbamidomethyl (C))RAY{I|L}{I|L} 3.6531;2.8438;2.6666;2.2101;2.0682;1.9155;1.8784;1.8624;1.8528;1.6745 -;-;-;-;-;-;-;-;-;- 1485 1 1.153 135721.0 1.0 8991 5554 14528 HBL1_DMSO_200M_050219_1,14547 HBL1_DMSO_200M_050219_1,14547,MFRNMPEIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14548 71.883 559.0 243080.0 25 0 41180.0 -1 0 81 1175.7754873675212 3524.304632702764 3 1176.446215808392 MULTI CID FTMS 0 0 0 14528 308265.59375 0.1112395696752997 -4 0.3110809326171875 20 3 {M(Oxidation (M))|F}[DC]Y[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}GC(Carbamidomethyl (C)) 9 -1 17.369 0.0 0.0 0.49283 0.0 0.0 946.3230407500296 1359.548117896686 2305.871158646716 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[DC]Y[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}GC(Carbamidomethyl (C)) 0.49283 - 197 + 1 1.153 105668.2 1.0 8992 5554 14528 HBL1_DMSO_200M_050219_1,14548 HBL1_DMSO_200M_050219_1,14548, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14550 71.888 8.9 6629300.0 25 0 480000.0 + 2315 AQIKEMVEL 9 92 530.7890827109852 1059.5636124887703 2 530.7895385622978 MULTI CID FTMS 0 0 0 14549 4636130.5 0.3792207364102353 3 -0.3594589233398437 1 Unmodified _AQIKEMVEL_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 53.40400417844725 0.0329064971918313 3 {[QN]|[E{I|L}]|[KN]}K[QA]MVE{I|L} 9 4 + 43.606 0.0 0.0 4.1155 4.1155 70.239 0.0 0.0 0.0 0.4799179148190546 7.16998572440481 0.4799179148190546 0.4799179148190546 0 0.3494850021680094 0.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}K[QA]MVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}MK{[NV]|[RG]}VE{I|L};{[QN]|[E{I|L}]|[KN]}K[QA]VME{I|L};{NN|[MP]|[D{I|L}]|[EV]}MR[KG]VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}MK{I|L}[QA]E{I|L};{NN|[MP]|[D{I|L}]|[EV]}MKE{I|L}[QA]{I|L};{NN|[MP]|[D{I|L}]|[EV]}MR[RK]E{I|L};{NN|[MP]|[D{I|L}]|[EV]}MRT{I|L}[QA]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[QA]MVE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VK{[NV]|[RG]}VE{I|L} 4.1155;4.0702;3.8314;3.7861;3.6199;3.4562;3.1747;3.1721;3.0982;3.0159 -;-;-;-;-;-;-;-;-;- 480 1 1.155 52710.7 1.0 8993 5555 14549 HBL1_DMSO_200M_050219_1,14550 HBL1_DMSO_200M_050219_1,14550,AQIKEMVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14551 71.889 10.0 5651200.0 25 0 1280200.0 + + 4940 DGIVIVKV 8 68 421.771042822027 841.5275327108541 2 421.7708923220634 MULTI CID FTMS 0 0 0 14549 4795461.0 1.0 0 0.0 2 Unmodified _DGLVLVKV_ ENSG00000106261|ENST00000324306|ZKSCAN1;ENST00000482979.5_1_7:99621129-99621950:+|nuORF 34.10243960390752 0.3329570729325616 3 [DG]{I|L}V{I|L}VKV 8 -1 [DG]{I|L} + + 39.341 15.686 5.5014 4.6749 4.6749 54.572 0.0 0.0 0.0 0.0 23.654542736675083 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.2887254899964357 [DG]{I|L}V{I|L}VKV 4.6749 + + 66 + 1 1.155 53093.2 1.0 8994 5555 14549 HBL1_DMSO_200M_050219_1,14551 HBL1_DMSO_200M_050219_1,14551,DGLVLVKV False False DGIVIVKV 71.888901 421.770892322063 140015484.0 14549.0 ENSG00000106261|ENST00000324306|ZKSCAN1;;ENST00000482979.5_1_7:99621129-99621950:+|nuORF 4.610089302062988 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14552 71.89 16.0 3106500.0 25 0 498840.0 + 9111 FFPDKPITQY 10 65 628.3215495725626 1254.6285462119251 2 628.3217651247978 MULTI CID FTMS 0 0 0 14549 2625526.0 0.0815501348367109 14 -1.3564071655273438 3 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 34.93206674587334 0.2110832994570416 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]TQY 10 0 + 42.089 0.0 0.0 3.3547 3.3547 50.927 0.0 0.0 0.0 23.372053161646416 10.868193983395638 10.868193983395638 0.0 0 0.3494850021680094 0.0 0.0 0.6989700043360187 + + {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}]QY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}][AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]T[AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]T[AG]Y;[DP]PT[{I|L}P][WH][RH] 3.3547;3.3547;3.1147;2.4056;2.4056;2.1657;0.12872 +;-;-;-;-;-;- + 194 + 1 1.155 40375.7 1.0 8995 5555 14549 HBL1_DMSO_200M_050219_1,14552 HBL1_DMSO_200M_050219_1,14552,FFPDKPITQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14553 71.891 9.4 4846700.0 25 0 571230.0 + + 9925 DRHDLIAGI 9 87 505.2746962679951 1008.5348396027904 2 505.2755309939384 MULTI CID FTMS 0 0 0 14549 2484725.75 0.1520914391409172 6 -0.65283203125 4 Unmodified _FPGHTPLQL_ nc|ENSG00000080493|Q9Y6R1-3|SLC4A4;ENSG00000080493|ENST00000264485|SLC4A4;nc|ENSG00000080493|Q9Y6R1-4|SLC4A4;nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4 23.1484247019978 0.2366544122328345 3 MQ{I|L} 3 -1 15.903 0.0 0.0 1.5768 0.0 0.0 618.3380450244684 0.0 618.3380450244684 0.0 3.4286373909302696 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.4247425010840047 MQ{I|L} 1.5768 - 217 + 1 1.155 40929.3 1.0 8996 5555 14549 HBL1_DMSO_200M_050219_1,14553 HBL1_DMSO_200M_050219_1,14553,FPGHTPLQL False False DRHDLIAGI 71.891259 505.275530993938 162388672.0 14549.0 nc|ENSG00000080493|Q9Y6R1-3|SLC4A4;;ENSG00000080493|ENST00000264485|SLC4A4;;nc|ENSG00000080493|Q9Y6R1-4|SLC4A4;;nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;;nc|ENSG00000080493|Q9Y6R1-5|SLC4A4 0.7842762072881063 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14554 71.892 34.0 1290700.0 25 0 255310.0 + 15253 IPGQTAIYVK 10 59 545.3163856108691 1088.6182182885382 2 545.3175536990166 MULTI CID FTMS 0 0 0 14549 1156733.375 0.2539211264755021 8 -0.7714004516601562 5 Unmodified _IPGQTAIYVK_ REV__ENSG00000110786|ENST00000358540|PTPN5;REV__nc|ENSG00000110786|P54829-2|PTPN5;REV__nc|ENSG00000110786|P54829-3|PTPN5 3.2813086475875832 0.7114585191678878 3 PK 2 -1 19.464 0.0 0.0 1.788 0.0 0.0 845.4588490216812 0.0 845.4588490216812 0.0 18.868018113164613 0.0 0.0 0 0.0 0.0 0.0 0.0 PK 1.788 - 4 1 1.155 40152.9 1.0 8997 5555 14549 HBL1_DMSO_200M_050219_1,14554 HBL1_DMSO_200M_050219_1,14554,IPGQTAIYVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14555 71.898 313.0 256510.0 25 0 59609.0 -1 0 63 1180.763633080028 3539.2690698402844 3 1181.433886706829 MULTI CID FTMS 0 0 0 14549 987552.75 0.5285228902075091 -4 0.32440185546875 6 3 E 1 -1 6.9897 0.0 0.0 0.19749 0.0 0.0 2883.037332635009 524.162852970741 3407.2001856057504 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19749 - 26 + 1 1.155 73119.7 1.0 8998 5555 14549 HBL1_DMSO_200M_050219_1,14555 HBL1_DMSO_200M_050219_1,14555, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14556 71.9 64.0 886090.0 25 0 47259.0 + -1 VPTAMCIMVL 10 79 575.785303922906 1149.556054912612 2 575.7861205935478 MULTI CID FTMS 0 0 0 14549 765863.25 0.5413302774989751 -2 0.1803665161132812 7 Carbamidomethyl (C),Oxidation (M) _VPTAM(Oxidation (M))C(Carbamidomethyl (C))IMVL_ REV__ENSG00000023839|ENST00000647814|ABCC2 7.910154910731844 0.6900473968920092 3 VPVK 4 -1 18.928 0.0 0.0 1.6465 0.0 0.0 149.10596600607056 574.1453341119749 723.2513001180455 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VPVK 1.6465 - 146 + 1 1.155 53323.3 1.0 8999 5555 14549 HBL1_DMSO_200M_050219_1,14556 HBL1_DMSO_200M_050219_1,14556,VPTAMCIMVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14557 71.901 45.0 975800.0 25 0 71619.0 + 36121 SVSQCLIVGI 10 82 509.7832800918628 1017.5520072505255 2 509.7834655642509 MULTI CID FTMS 0 0 0 14549 672079.0625 1.0 0 0.0 8 Unmodified _SVSQCLIVGI_ REV__ENSG00000152749|ENST00000376958|GPR180 19.256988751693697 0.5244284437930726 3 MED{I|L} 4 -1 25.433 0.0 0.0 2.4994 0.0 0.0 141.11543606087554 385.22214685611567 526.3375829169912 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 MED{I|L} 2.4994 - 27 + 1 1.155 40948.3 1.0 9000 5555 14549 HBL1_DMSO_200M_050219_1,14557 HBL1_DMSO_200M_050219_1,14557,SVSQCLIVGI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14558 71.905 216.0 649400.0 25 0 112100.0 + 12403 GTIGLIHAV 9 142 440.7661547264594 879.5177565197189 2 440.7662231326103 MULTI CID FTMS 0 0 0 14549 487404.1875 0.0138905582605591 14 -1.3564071655273438 9 Unmodified _GTIGLIHAV_ ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF 26.34127834903884 0.1960301806784604 3 {[SA]|[TG]}{I|L}G{I|L}E{I|L} 7 4 45.952 0.0 0.0 5.2247 0.0 0.0 0.0 193.09864221744377 193.09864221744377 14.237925018646784 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.7742275032520141 0.0 {[SA]|[TG]}{I|L}G{I|L}E{I|L} 5.2247 - 415 + 1 1.155 112685.9 1.0 9001 5555 14549 HBL1_DMSO_200M_050219_1,14558 HBL1_DMSO_200M_050219_1,14558,GTIGLIHAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14559 71.914 489.0 294540.0 25 0 42981.0 -1 0 78 878.5876331525943 3510.321426743977 4 879.0894042849541 MULTI CID FTMS 0 0 0 14549 319744.84375 0.1286110601060761 -4 0.32440185546875 10 3 E 1 -1 8.9794 0.0 0.0 0.2558 0.0 0.0 2992.187391350129 386.06769150111626 3378.255082851245 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 E 0.2558 - 219 + 1 1.155 128893.5 1.0 9002 5555 14549 HBL1_DMSO_200M_050219_1,14559 HBL1_DMSO_200M_050219_1,14559, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14560 71.918 250.0 511780.0 25 0 95471.0 21532 LPITKTSL 8 126 436.7753003675666 871.5360478019333 2 436.7756530642509 MULTI CID FTMS 0 0 0 14549 330934.6875 0.032014407149812 8 -0.7714004516601562 11 Unmodified _LPITKTSL_ ENST00000529943.6_1_16:31765215-31765368:+|nuORF 2.577480529830294 0.808687252328423 3 {I|L} 1 7 11.259 0.0 0.0 1.2919 0.0 0.0 740.4410140878692 0.0 740.4410140878692 0.0 1.5813498111035873 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2919 + + 44 + 1 1.155 103941.5 1.0 9003 5555 14549 HBL1_DMSO_200M_050219_1,14560 HBL1_DMSO_200M_050219_1,14560,LPITKTSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14561 71.927 492.0 412320.0 25 0 30965.0 + -1 AFSVTGTSL 9 130 882.0841638477418 3524.307549524567 4 882.3350097537041 MULTI CID FTMS 0 0 0 14549 319824.375 0.1205003378217041 -3 0.2715988159179687 12 ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 3 {[WT]|[RM]}VTGTA{M(Oxidation (M))|F} 8 -1 26.34 0.0 0.0 0.74739 0.0 0.0 0.0 2657.8478687874504 2657.8478687874504 0.0934800842451544 0.0 0.0 0.0 0 0.0 0.0 1.2931576817365436 0.0 {[WT]|[RM]}VTGTA{M(Oxidation (M))|F} 0.74739 - 573 1 1.155 150396.5 1.0 9004 5555 14549 HBL1_DMSO_200M_050219_1,14561 HBL1_DMSO_200M_050219_1,14561, False False AFSVTGTSL 71.927074 882.0845 1179289.75 14549.0 ENSG00000115368|ENST00000314761|WDR75;;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 2.4868217476954064 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14562 71.936 493.0 398010.0 25 0 23670.0 + 29580 KQWETQPGFYSV 12 162 735.3564594531489 1468.6983659730977 2 735.3577148318291 MULTI CID FTMS 0 0 0 14549 313337.0 0.8084111399794003 -1 0.0471649169921875 13 Unmodified _QLRYHCREDHI_ nc|ENSG00000086200|Q9UI26-2|IPO11;ENSG00000086200|ENST00000325324|IPO11 11.494710602746466 0.7960433852372589 3 [WE]QKTQ[PG]{M(Oxidation (M))|F}YW 11 11 + 80.799 0.0 0.0 5.5014 5.5014 75.613 0.0 0.0 0.0 1.3984855221736296 2.537919045242006 1.3984855221736296 0.8927186071611857 0 2.0 0.0 2.234636880228201 0.805462187404089 [WE]QKTQ[PG]{M(Oxidation (M))|F}YW;[WE]QTKQPG{M(Oxidation (M))|F}YW;[{M(Oxidation (M))|F}T]VSHTQ[PG]{M(Oxidation (M))|F}YW;[WE]QKPN[TA]{M(Oxidation (M))|F}YW;[PG]{M(Oxidation (M))|F}[RN]TQ[PG]{M(Oxidation (M))|F}YW;[KQ]WETQ[PG]{M(Oxidation (M))|F}YW;{[CT]|[{M(Oxidation (M))|F}G]}Y{M(Oxidation (M))|F}[PG]QTHSVMV;[{M(Oxidation (M))|F}T]VSHPN[TA]{M(Oxidation (M))|F}YW;[KQ]WEPN[TA]{M(Oxidation (M))|F}YW;{[CT]|[{M(Oxidation (M))|F}G]}Y{M(Oxidation (M))|F}[TA]NPHSVMV 5.5014;5.4406;5.4062;5.3999;5.371;5.339;5.3286;5.3046;5.2374;5.2271 -;-;-;-;-;-;-;-;-;- 23917 1 1.155 140781.9 1.0 9005 5555 14549 HBL1_DMSO_200M_050219_1,14562 HBL1_DMSO_200M_050219_1,14562,QLRYHCREDHI False False KQWETQPGFYSV 71.935807 735.357714831829 5452296.0 14549.0 nc|ENSG00000086200|Q9UI26-2|IPO11;;ENSG00000086200|ENST00000325324|IPO11 10.821020444234213 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14563 71.945 531.0 614360.0 25 0 55750.0 + 32109 RVLTSGIFET 10 194 561.8113034623991 1121.608053991598 2 561.8112670779228 MULTI CID FTMS 0 0 0 14549 295561.5625 0.2675482264421314 -2 0.1803665161132812 14 Unmodified _RVLTSGIFET_ ENSG00000087460|ENST00000371085|GNAS;ENSG00000141404|ENST00000334049|GNAL;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS;nc|ENSG00000141404|P38405|GNAL 71.70789743142352 0.0188816056000227 3 [{I|L}V]RTSG{I|L}{M(Oxidation (M))|F}ET 10 2 + 66.981 0.0 0.0 5.9719 5.9719 76.176 0.0 0.0 0.0 0.3713486201568372 5.849456461639996 0.3713486201568372 0.3713486201568372 0 1.055462187404089 0.6020599913279624 1.0114393726401687 0.3054621874040891 [{I|L}V]RTSG{I|L}{M(Oxidation (M))|F}ET;{[QN]|[E{I|L}]|[KN]}KVSG{I|L}{M(Oxidation (M))|F}ET;{[TV]|[{I|L}S]}[R{I|L}]SG{I|L}{M(Oxidation (M))|F}ET;[{I|L}V]RTSG{I|L}{M(Oxidation (M))|F}TE;{[QN]|[E{I|L}]|[KN]}KVSG{I|L}{M(Oxidation (M))|F}TE;{[TV]|[{I|L}S]}[R{I|L}]SG{I|L}{M(Oxidation (M))|F}TE;[{I|L}T][RV]SG{I|L}{M(Oxidation (M))|F}ET;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}SG{I|L}{M(Oxidation (M))|F}ET;[{I|L}T][RV]SG{I|L}{M(Oxidation (M))|F}TE;{M(Oxidation (M))|F}T{M(Oxidation (M))|F}{I|L}[QA][VP]VT 5.9719;5.9388;5.6707;5.4504;5.4173;5.1492;4.8635;4.4917;4.342;4.2598 -;-;-;-;-;-;-;-;-;- 1378 1 1.155 240907.6 1.0 9006 5555 14549 HBL1_DMSO_200M_050219_1,14563 HBL1_DMSO_200M_050219_1,14563,RVLTSGIFET True True RVLTSGIFET 71.945159 561.811267077923 9029514.0 14549.0 ENST00000371075.7_3_20:57415898-57485881:+|nuORF;;nc|ENSG00000087460|Q5JWF2-2|GNAS;;nc|ENSG00000087460|Q5JWF2|GNAS;;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;;ENSG00000141404|ENST00000334049|GNAL;;nc|ENSG00000087460|P63092-3|GNAS;;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;;nc|ENSG00000141404|P38405|GNAL;;nc|ENSG00000087460|P63092-2|GNAS;;nc|ENSG00000087460|P63092-4|GNAS;;ENSG00000087460|ENST00000371085|GNAS 5.745975335439046 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14564 71.954 522.0 285390.0 25 0 31859.0 -1 VMKLLRMALS 10 180 589.3433381765957 1176.6721234199913 2 589.3430053591728 MULTI CID FTMS 0 0 0 14549 289708.3125 0.1390932193701075 -7 0.5454483032226562 15 Oxidation (M) _VM(Oxidation (M))KLLRMALS_ ENSG00000103356|ENST00000449606|EARS2;ENST00000564987.1_1_16:23535694-23546228:-|nuORF;nc|ENSG00000103356|Q5JPH6-2|EARS2 10.073929032068715 0.6785112666868882 3 {I|L} 1 -1 10.485 0.0 0.0 0.89103 0.0 0.0 1045.577074447138 0.0 1045.577074447138 0.0 0.2069634257911268 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.89103 + + 421 + 1 1.155 114009.4 1.0 9007 5555 14549 HBL1_DMSO_200M_050219_1,14564 HBL1_DMSO_200M_050219_1,14564,VMKLLRMALS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14565 71.965 547.0 399360.0 25 0 29766.0 + 17739 KPYNVYITV 9 184 548.8053918914762 1095.5962308497524 2 548.8062621951103 MULTI CID FTMS 0 0 0 14549 266741.34375 0.4849068966723945 -1 0.0471649169921875 16 Unmodified _KPYNVYITV_ ENSG00000119537|ENST00000645214|KDSR;ENST00000585750.1_1_18:61011618-61022465:-|nuORF;ENST00000586791.5_1_18:60999017-61011732:-|nuORF;nc|ENSG00000119537|Q06136-2|KDSR 68.08070601005525 0.0218408846571049 3 [{I|L}T]C(Carbamidomethyl (C))VKY{I|L}TV 9 5 + 94.196 0.0 0.0 8.5977 8.5977 89.049 0.0 0.0 0.0 4.520534381044499 16.478174818886373 4.520534381044499 4.520534381044499 0 0.8807196863200843 1.0457574905606752 1.2218487496163564 1.110924374808178 [{I|L}T]C(Carbamidomethyl (C))VKY{I|L}TV;{[TV]|[{I|L}S]}{I|L}C(Carbamidomethyl (C))KY{I|L}TV;[{I|L}T]C(Carbamidomethyl (C))KVY{I|L}TV;[{I|L}T]C(Carbamidomethyl (C))VYK{I|L}TV;[{I|L}T]VC(Carbamidomethyl (C))KY{I|L}TV;[{I|L}T][CG]VKY{I|L}TV;{[TV]|[{I|L}S]}{I|L}C(Carbamidomethyl (C))YK{I|L}TV;{[TV]|[{I|L}S]}{I|L}[CG]KY{I|L}TV;[{I|L}T]KCGVY{I|L}TV;[{I|L}T]VC(Carbamidomethyl (C))YK{I|L}TV 8.5977;8.1851;8.0482;7.9755;7.9598;7.7573;7.5629;7.3447;7.338;7.3375 -;-;-;-;-;-;-;-;-;- 9887 1 1.155 176625.7 1.0 9008 5555 14549 HBL1_DMSO_200M_050219_1,14565 HBL1_DMSO_200M_050219_1,14565,KPYNVYITV True True KPYNVYITV 71.96514 548.8072 5401283.5 14549.0 ENST00000585750.1_1_18:61011618-61022465:-|nuORF;;ENSG00000119537|ENST00000645214|KDSR;;ENST00000586791.5_1_18:60999017-61011732:-|nuORF;;nc|ENSG00000119537|Q06136-2|KDSR 6.869314034779866 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14566 71.969 183.0 396790.0 25 0 57773.0 + 31846 RTFDETVSTYV 11 87 659.3196448118922 1316.6247366905843 2 659.3198119997978 MULTI CID FTMS 0 0 0 14549 266518.6875 0.434017745439978 -1 0.0471649169921875 17 Unmodified _RTFDETVSTYV_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 34.221707139014875 0.3014076866608453 3 [YT][PA]SETVSTYV 12 4 + 84.041 0.0 0.0 6.383 6.383 83.736 0.0 0.0 0.0 4.259687322722812 16.611814434466197 4.259687322722812 4.259687322722812 0 0.7215141619232908 1.6989700043360187 1.805462187404089 0.0 [YT][PA]SETVSTYV;{[DA]|[EG]}{M(Oxidation (M))|F}VSETVSTYV;{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}SETVSTYV;[{M(Oxidation (M))|F}E]GVSETVSTYV;{[DA]|[EG]}V{M(Oxidation (M))|F}SETVSTYV;{NN|[MP]|[D{I|L}]|[EV]}[YQ]ETVSTYV;[PA]TYSETVSTYV;[YT][PA][WM]VSTYV;{[TV]|[{I|L}S]}[MT]SETVSTYV;{[DA]|[EG]}{M(Oxidation (M))|F}V[WM]VSTYV 6.383;6.0595;5.9994;5.792;5.5286;5.4236;5.084;4.914;4.7303;4.5905 -;-;-;-;-;-;-;-;-;- 1100 1 1.155 56688.5 1.0 9009 5555 14549 HBL1_DMSO_200M_050219_1,14566 HBL1_DMSO_200M_050219_1,14566,RTFDETVSTYV False True RTFDETVSTYV 71.968688 659.319811999798 4496572.5 14549.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 8.381035486857096 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14567 71.979 615.0 360060.0 25 0 31937.0 + 26120 NPREWTPEI 9 221 571.2863532668998 1140.5581536005996 2 571.7881957888603 MULTI CID FTMS 0 0 0 14549 234129.875 0.03862308138219 11 -1.10089111328125 18 Unmodified _NPREWTPEI_ ENSG00000134759|ENST00000358232|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 27.628801355627647 0.1796483985696185 3 [EP][RN]WT 6 5 26.775 0.0 0.0 2.3475 0.0 0.0 0.0 354.1686632043684 354.1686632043684 14.785240617616964 0.0 0.0 0.0 0 0.8252574989159953 1.5228787452803376 0.3054621874040891 0.3494850021680094 [EP][RN]WT 2.3475 - 3721 1 1.155 170100.0 1.0 9010 5555 14549 HBL1_DMSO_200M_050219_1,14567 HBL1_DMSO_200M_050219_1,14567,NPREWTPEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14568 71.99 629.0 541910.0 25 0 78990.0 -1 0 138 886.0769165475697 3540.2785603238785 4 886.3304321169853 MULTI CID FTMS 0 0 0 14549 222350.15625 0.2087367131102006 -3 0.2715988159179687 19 3 E 1 -1 6.9897 0.0 0.0 0.19743 0.0 0.0 2884.050183804748 524.1636171764027 3408.21380098115 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19743 - 558 + 1 1.155 271499.9 1.0 9011 5555 14549 HBL1_DMSO_200M_050219_1,14568 HBL1_DMSO_200M_050219_1,14568, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14569 72.005 763.0 84587.0 25 0 18151.0 -1 0 54 1186.428759753704 0 1186.428759753704 PEAK CID FTMS 0 0 0 -1 0 20 3 YN{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E 5 -1 8.4999 0.0 0.0 0.35852 0.0 0.0 1203.4382124393728 524.1628596103104 1727.6010720496834 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 YN{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E 0.35852 - 38 + 1 1.155 56782.0 1.0 9012 5555 14549 HBL1_DMSO_200M_050219_1,14569 HBL1_DMSO_200M_050219_1,14569, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14571 72.009 11.0 2864800.0 25 0 392720.0 + 4970 DGRIFGESI 9 58 497.2538976333373 992.4932423334748 2 497.2539245486259 MULTI CID FTMS 0 0 0 14570 4699190.5 0.4008092367814864 3 -0.2782211303710937 1 Unmodified _DGRIFGESI_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35;nc|ENSG00000163002|Q8NFH5-3|NUP35 28.49450938151212 0.1686335738423394 3 {[TV]|[{I|L}S]}{[WT]|[RM]}TGES{I|L} 9 4 + 61.065 0.0 0.0 6.1527 6.1527 81.159 0.0 0.0 0.0 3.413924543379494 34.40999983289359 3.413924543379494 3.0102999566398125 0 0.9247425010840048 1.5228787452803376 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{[WT]|[RM]}TGES{I|L};{[TV]|[{I|L}S]}{[WT]|[RM]}TADS{I|L};{[TV]|[{I|L}S]}{[WT]|[RM]}TWS{I|L};{[TV]|[{I|L}S]}{[WT]|[RM]}TGTD{I|L};{[TV]|[{I|L}S]}{[WT]|[RM]}TASD{I|L};{[DA]|[EG]}[RV]{M(Oxidation (M))|F}GES{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}[MT]ES{I|L};{[DA]|[EG]}[RV]{M(Oxidation (M))|F}ADS{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}{M(Oxidation (M))|F}WD{I|L};{[DA]|[EG]}[RV]{M(Oxidation (M))|F}GTD{I|L} 6.1527;5.8494;5.5;5.3456;5.0423;4.9732;4.7442;4.6699;4.3896;4.1661 -;-;-;-;-;-;-;-;-;- 207 1 1.155 30792.1 1.0 9013 5556 14570 HBL1_DMSO_200M_050219_1,14571 HBL1_DMSO_200M_050219_1,14571,DGRIFGESI False True DGRIFGESI 72.009079 497.253924548626 232509552.0 14570.0 ENSG00000163002|ENST00000295119|NUP35;;nc|ENSG00000163002|Q8NFH5-2|NUP35;;nc|ENSG00000163002|Q8NFH5-3|NUP35 4.811043659845988 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14572 72.01 18.0 1563600.0 25 0 88297.0 + 17385 KMIEDLQNEL 10 55 616.8131122269399 1231.6116715206797 2 616.8135253787041 MULTI CID FTMS 0 0 0 14570 2826377.5 0.3370354985369354 3 -0.2782211303710937 2 Unmodified _KMIEDLQNEL_ ENSG00000198887|ENST00000361138|SMC5 49.52724829834842 0.0829255630816734 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KED{I|L}QNE{I|L} 10 2 + 71.209 0.0 0.0 5.7818 5.7818 85.231 0.0 0.0 0.0 6.0071123335628585 53.34875380571489 6.0071123335628585 7.7435003003541425 0 0.6861818737241735 0.0 1.0994850021680094 0.4247425010840047 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KED{I|L}QNE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EM{I|L}QNE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KED{I|L}[AG]NE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KED{I|L}QGGE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EM{I|L}[AG]NE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EM{I|L}QGGE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KED{I|L}[AG]GGE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WW{I|L}QNE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WW{I|L}QGGE{I|L};{[QN]|[E{I|L}]|[KN]}D[H{I|L}][H{I|L}]NE{I|L} 5.7818;5.1531;5.0377;5.0377;4.409;4.409;4.2965;3.9144;3.1667;3.0663 -;-;-;-;-;-;-;-;-;- 219 1 1.155 27323.6 1.0 9014 5556 14570 HBL1_DMSO_200M_050219_1,14572 HBL1_DMSO_200M_050219_1,14572,KMIEDLQNEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14573 72.011 8.5 10359000.0 25 0 665330.0 + 16267 IVTFVYEI 8 101 492.2744977102584 982.5344424873168 2 492.2744018435478 MULTI CID FTMS 0 0 0 14570 4318074.5 0.8895381773804932 -1 0.1213531494140625 3 Unmodified _IVTFVYEI_ REV__ENSG00000185313|ENST00000449082|SCN10A 14.581692164780916 0.6954967302934248 3 [{I|L}V]TKS{I|L}{I|L} 7 -1 32.74 0.0 0.0 3.3322 0.0 0.0 0.0 225.0137447973252 225.0137447973252 3.309932190414244 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.0 [{I|L}V]TKS{I|L}{I|L} 3.3322 - 252 1 1.155 74769.2 1.0 9015 5556 14570 HBL1_DMSO_200M_050219_1,14573 HBL1_DMSO_200M_050219_1,14573,IVTFVYEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14574 72.013 15.0 3403800.0 25 0 596150.0 + 21663 LPLLLHLF 8 62 483.3106918947211 964.6068308562424 2 483.3110839724541 MULTI CID FTMS 0 0 0 14570 4255073.5 1.0 0 0.0 4 Unmodified _LPLLLHLF_ REV__ENSG00000100429|ENST00000216271|HDAC10;REV__ENST00000415993.5_1_22:50686492-50688322:-|nuORF;REV__ENST00000483222.5_1_22:50686861-50687933:-|nuORF;REV__ENST00000497036.5_1_22:50684150-50687609:-|nuORF;REV__ENST00000498366.5_1_22:50686861-50689256:-|nuORF;REV__nc|ENSG00000100429|Q969S8-2|HDAC10;REV__nc|ENSG00000100429|Q969S8-4|HDAC10;REV__nc|ENSG00000100429|Q969S8-5|HDAC10 41.81723621529253 0.2038889569391319 3 {I|L}P{I|L}{I|L} 4 -1 63.175 0.0 0.0 6.5493 0.0 0.0 0.0 525.2805659591656 525.2805659591656 52.79672174467077 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.0 0.0 {I|L}P{I|L}{I|L} 6.5493 + + 30 + 1 1.155 43092.0 1.0 9016 5556 14570 HBL1_DMSO_200M_050219_1,14574 HBL1_DMSO_200M_050219_1,14574,LPLLLHLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14575 72.014 17.0 2323500.0 25 0 404900.0 + 40570 VKIVYELVK 9 71 545.8468629368451 1089.6791729404902 2 545.8474609255791 MULTI CID FTMS 0 0 0 14570 2145736.0 0.1026376039273806 -3 0.3017196655273437 5 Unmodified _VKIVYELVK_ REV__ENSG00000198681|ENST00000356661|MAGEA1 23.78978130925829 0.2284941198415988 3 {I|L}VK 3 -1 25.712 0.0 0.0 2.3596 0.0 0.0 731.4203056082621 0.0 731.4203056082621 0.0 1.2484483064759289 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 {I|L}VK 2.3596 + + 38 + 1 1.155 38793.3 1.0 9017 5556 14570 HBL1_DMSO_200M_050219_1,14575 HBL1_DMSO_200M_050219_1,14575,VKIVYELVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14576 72.015 29.0 1229100.0 25 0 145940.0 21622 LPLAAALAF 9 67 443.7734510303929 885.5323491275858 2 443.7732421755791 MULTI CID FTMS 0 0 0 14570 1923885.375 0.1125708641873309 40 -3.196495056152344 6 Unmodified _LPLAAALAF_ ENSG00000262655|ENST00000576479|SPON1 14.581692164780916 0.4419739649577144 3 {I|L}P 2 7 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3746431940061 672.3746431940061 20.59508461319119 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 40 + 1 1.155 35674.0 1.0 9018 5556 14570 HBL1_DMSO_200M_050219_1,14576 HBL1_DMSO_200M_050219_1,14576,LPLAAALAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14577 72.016 30.0 594670.0 25 0 44094.0 + 27451 PIVITYFVP 9 59 524.8085839636628 1047.6026149941256 2 524.8092529177666 MULTI CID FTMS 0 0 0 14570 1824187.625 0.8468643996881687 -1 0.1213531494140625 7 Unmodified _PIVITYFVP_ REV__ENSG00000181761|ENST00000313472|OR8H3 2.059750862983233 0.8427793054688888 3 {I|L} 1 -1 10.278 0.0 0.0 0.98106 0.0 0.0 916.5074592097492 0.0 916.5074592097492 0.0 10.277586639249154 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.98106 + + 2 + 1 1.155 20792.8 1.0 9019 5556 14570 HBL1_DMSO_200M_050219_1,14577 HBL1_DMSO_200M_050219_1,14577,PIVITYFVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14578 72.017 51.0 1227200.0 25 0 246170.0 -1 0 77 341.7469171339709 681.4792813347419 2 341.7466308474541 MULTI CID FTMS 0 0 0 14570 1707213.125 1.0 0 0.0 8 3 {I|L}{I|L}{I|L}PKV 6 -1 + 44.913 0.0 0.0 6.5906 6.5906 88.242 0.0 0.0 0.0 27.746437418586552 7.918640642106084 7.918640642106084 8.430165866579898 0 0.3807196863200844 2.0 0.0 0.2134679910804404 {I|L}{I|L}{I|L}PKV;{I|L}{I|L}{I|L}V[KP];{I|L}{I|L}V{I|L}[KP];{I|L}{I|L}VK[{I|L}P];[{I|L}P]KV{I|L}{I|L};[KP]{I|L}V{I|L}{I|L} 6.5906;5.3535;3.9533;3.7389;2.5112;1.4184 -;-;-;-;-;- 56 + 1 1.155 56905.4 1.0 9020 5556 14570 HBL1_DMSO_200M_050219_1,14578 HBL1_DMSO_200M_050219_1,14578, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14579 72.019 71.0 1310400.0 25 0 142480.0 + 15441 IPPVAVRL 8 78 432.78695669087136 863.5593604485427 2 432.7870056033134 MULTI CID FTMS 0 0 0 14570 1175276.5 0.4677321353186909 -3 0.3017196655273437 9 Unmodified _IPPVAVRL_ ENSG00000111642|ENST00000544040|CHD4;ENST00000535717.1_1_12:6679844-6680280:-|nuORF;nc|ENSG00000111642|Q14839-2|CHD4 18.13498045792455 0.6430038125133779 3 {I|L}PPV 4 4 52.735 0.0 0.0 6.1067 0.0 0.0 0.0 454.2795874474487 454.2795874474487 41.56508933499886 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}PPV 6.1067 + + 26 + 1 1.155 77955.0 1.0 9021 5556 14570 HBL1_DMSO_200M_050219_1,14579 HBL1_DMSO_200M_050219_1,14579,IPPVAVRL False True IPPVAVRL 72.019135 432.787005603313 23899370.0 14570.0 ENSG00000111642|ENST00000544040|CHD4;;ENST00000535717.1_1_12:6679844-6680280:-|nuORF;;nc|ENSG00000111642|Q14839-2|CHD4 0.0725928644339243 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14580 72.02 39.0 928780.0 25 0 58145.0 + -1 VLVFLMKTV 9 86 533.3229047284193 1064.6312565236385 2 533.3226806521416 MULTI CID FTMS 0 0 0 14570 1117506.875 0.9725678799793348 -1 0.1213531494140625 10 Oxidation (M) _VLVFLM(Oxidation (M))KTV_ REV__ENSG00000171596|ENST00000305141|NMUR1 16.942295170755138 0.3780752226737986 3 V 1 -1 12.474 0.0 0.0 1.1717 0.0 0.0 947.551580780766 0.0 947.551580780766 0.0 2.095646538709879 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1717 + + 138 + 1 1.155 33517.9 1.0 9022 5556 14570 HBL1_DMSO_200M_050219_1,14580 HBL1_DMSO_200M_050219_1,14580,VLVFLMKTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14581 72.021 39.0 696670.0 25 0 54142.0 + 14492 IGIRRFSNWDI 11 56 459.58540135974096 1375.734374679423 3 459.5854675173759 MULTI CID FTMS 0 0 0 14570 903751.125 0.3976023453559774 -3 0.3017196655273437 11 Unmodified _IGIRRFSNWDI_ REV__L1PA6_dup546|chr2:49227587-49231532:-|1.156546377819926|0.2927699401366612|1.98|48.0|146|1|anti-sense 3.5964929083625545 0.858179447565866 3 {[VA]|[{I|L}G]}[KG]{I|L}Y 6 -1 21.628 0.0 0.0 1.5721 0.0 0.0 0.0 741.3417714902229 741.3417714902229 8.133637307377057 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}[KG]{I|L}Y 1.5721 - 40 1 1.155 30418.6 1.0 9023 5556 14570 HBL1_DMSO_200M_050219_1,14581 HBL1_DMSO_200M_050219_1,14581,IGIRRFSNWDI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14582 72.023 49.0 1021000.0 25 0 102060.0 + 30131 QVLPPLRDV 9 70 518.8111246876575 1035.607696442115 2 518.8115722537041 MULTI CID FTMS 0 0 0 14570 792195.75 1.0 0 0.0 12 Unmodified _QVLHVQLSL_ nc|ENSG00000111785|Q9NVN3|RIC8B;ENSG00000111785|ENST00000392837|RIC8B;nc|ENSG00000177963|Q9NPQ8-3|RIC8A;nc|ENSG00000111785|Q9NVN3-3|RIC8B;nc|ENSG00000111785|Q9NVN3-4|RIC8B;nc|ENSG00000177963|Q9NPQ8-2|RIC8A;ENSG00000177963|ENST00000526104|RIC8A;nc|ENSG00000111785|Q9NVN3-1|RIC8B;nc|ENSG00000177963|Q9NPQ8-4|RIC8A 18.1463463914782 0.3454829746528889 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}P 4 6 43.258 0.0 0.0 4.177 0.0 0.0 0.0 595.3218135876203 595.3218135876203 32.661727396648686 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}P 4.177 - 73 + 1 1.155 45894.7 1.0 9024 5556 14570 HBL1_DMSO_200M_050219_1,14582 HBL1_DMSO_200M_050219_1,14582,QVLHVQLSL False False QVLPPLRDV 72.022808 518.811572253704 6764919.0 14570.0 nc|ENSG00000111785|Q9NVN3|RIC8B;;ENSG00000111785|ENST00000392837|RIC8B;;nc|ENSG00000177963|Q9NPQ8-3|RIC8A;;nc|ENSG00000111785|Q9NVN3-3|RIC8B;;nc|ENSG00000111785|Q9NVN3-4|RIC8B;;nc|ENSG00000177963|Q9NPQ8-2|RIC8A;;ENSG00000177963|ENST00000526104|RIC8A;;nc|ENSG00000111785|Q9NVN3-1|RIC8B;;nc|ENSG00000177963|Q9NPQ8-4|RIC8A 3.743823289871216 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14583 72.025 112.0 778170.0 25 0 66121.0 40909 VLSEEPILKWY 11 100 688.8735853942422 1375.7326178552844 2 689.3740112185478 MULTI CID FTMS 0 0 0 14570 795877.0625 0.469872484598377 -3 0.3017196655273437 13 Unmodified _VLSEEPILKWY_ ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1 18.1463463914782 0.6576820063886638 3 {NN|[MP]|[D{I|L}]|[EV]}TVER{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQ{I|L} 11 9 + 56.864 0.0 0.0 4.1334 4.1334 52.896 0.0 0.0 0.0 12.098158171386594 31.29659464672437 12.098158171386594 0.0 0 0.337180496500464 1.3979400086720375 1.2302046884880935 0.0 {NN|[MP]|[D{I|L}]|[EV]}TVER{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TVER{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TVE[NG]{M(Oxidation (M))|F}{I|L}KQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TEVR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TEVR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TEV[NG]{M(Oxidation (M))|F}{I|L}KQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TVE[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TVE[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TVER{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[AG]Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}TD{I|L}R{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQ{I|L} 4.1334;4.1334;4.0483;3.7462;3.7462;3.6612;3.4698;3.4698;3.4698;3.291 -;-;-;-;-;-;-;-;-;- 8364 1 1.155 72757.8 1.0 9025 5556 14570 HBL1_DMSO_200M_050219_1,14583 HBL1_DMSO_200M_050219_1,14583,VLSEEPILKWY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14584 72.028 163.0 619460.0 25 0 45145.0 -1 0 83 864.910326574354 1727.806100215508 2 864.9105712771416 MULTI CID FTMS 0 0 0 14570 601732.75 0.6790948058479441 -1 0.1213531494140625 14 3 [MN]PN{I|L}NEAQ 9 -1 67.858 0.0 0.0 3.9274 0.0 0.0 0.0 713.3378389947874 713.3378389947874 36.97289377609621 0.0 0.0 0.0 0 0.7302046884880937 1.5228787452803376 0.0 0.8494850021680094 [MN]PN{I|L}NEAQ 3.9274 - 206 + 1 1.155 70695.6 1.0 9026 5556 14570 HBL1_DMSO_200M_050219_1,14584 HBL1_DMSO_200M_050219_1,14584, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14585 72.037 458.0 408110.0 25 0 84256.0 -1 0 85 1106.4452860013043 3316.314028604113 3 1106.780322253704 MULTI CID FTMS 0 0 0 14570 518127.4375 0.3543344386749134 -3 0.3017196655273437 15 3 VGT{I|L}NT 6 -1 27.969 0.0 0.0 0.84338 0.0 0.0 2111.728897844151 616.2736944219125 2728.0025922660634 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 1.1549471895720984 VGT{I|L}NT 0.84338 - 622 + 1 1.155 156160.5 1.0 9027 5556 14570 HBL1_DMSO_200M_050219_1,14585 HBL1_DMSO_200M_050219_1,14585, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14586 72.041 256.0 488560.0 25 0 56604.0 + 18337 KVLEYVIKV 9 117 364.23396095998015 1089.6800534801405 3 364.2338439822197 MULTI CID FTMS 0 0 0 14570 481029.3125 0.2157443224521772 -4 0.3929519653320312 16 Unmodified _KVLEYVIKV_ ENSG00000198681|ENST00000356661|MAGEA1 47.74868867922204 0.0453060283459952 3 [{I|L}V]KEY 5 6 36.96 0.0 0.0 3.3918 0.0 0.0 0.0 454.3024669994805 454.3024669994805 8.80562001205011 0.0 0.0 0.0 0 0.7742275032520141 1.3979400086720375 0.7614393726401688 0.2887254899964357 [{I|L}V]KEY 3.3918 - 149 1 1.155 108735.1 1.0 9028 5556 14570 HBL1_DMSO_200M_050219_1,14586 HBL1_DMSO_200M_050219_1,14586,KVLEYVIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14587 72.051 534.0 490920.0 25 0 135600.0 -1 0 85 1196.1624962539936 3585.465659362181 3 1196.830981433392 MULTI CID FTMS 0 0 0 14570 471887.40625 0.5794859166366569 -1 0.1213531494140625 17 3 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.26395 0.0 0.0 1896.7074328990936 1481.6476667982176 3378.355099697312 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.26395 - 108 + 1 1.155 206884.1 1.0 9029 5556 14570 HBL1_DMSO_200M_050219_1,14587 HBL1_DMSO_200M_050219_1,14587, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14588 72.06 533.0 293860.0 25 0 65744.0 -1 0 69 1144.8080559618163 3431.402338485649 3 1145.482226550579 MULTI CID FTMS 0 0 0 14570 417298.5625 0.0207515458289 12 -1.1704559326171875 18 3 YY{[ES]|[DT]|[{I|L}C]}V 5 -1 10.317 0.0 0.0 0.30068 0.0 0.0 1456.4983521218387 1330.6181124322875 2787.1164645541267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 YY{[ES]|[DT]|[{I|L}C]}V 0.30068 - 35 + 1 1.155 130414.4 1.0 9030 5556 14570 HBL1_DMSO_200M_050219_1,14588 HBL1_DMSO_200M_050219_1,14588, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14589 72.062 68.0 910030.0 25 0 74990.0 + 19265 LEKKDELEL 9 95 558.8104466356592 1115.6063403381183 2 558.8111450076103 MULTI CID FTMS 0 0 0 14570 424078.59375 0.8789593283321561 -1 0.1213531494140625 19 Unmodified _LEKKDELEL_ REV__ENST00000464253.5_1_7:102964930-102985008:-|nuORF 30.63653989081413 0.1413794767160703 3 {[VA]|[{I|L}G]}{[{M(Oxidation (M))|F}H]|[RQ]}[C(Carbamidomethyl (C))K]{I|L}E{I|L} 9 -1 + 35.352 0.0 0.0 3.1689 3.1689 81.003 0.0 0.0 0.0 8.95267312392863 14.973024840566474 8.95267312392863 13.010299956639816 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}{[{M(Oxidation (M))|F}H]|[RQ]}[C(Carbamidomethyl (C))K]{I|L}E{I|L};{[VA]|[{I|L}G]}{[{M(Oxidation (M))|F}H]|[RQ]}[RN]{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[KC][Q{I|L}]{I|L}[RN] 3.1689;2.0027;0.95242 -;-;- 163 1 1.155 54731.5 1.0 9031 5556 14570 HBL1_DMSO_200M_050219_1,14589 HBL1_DMSO_200M_050219_1,14589,LEKKDELEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14590 72.071 534.0 289840.0 25 0 65226.0 -1 0 85 1066.0960107160452 3195.266202748336 3 1066.429125964642 MULTI CID FTMS 0 0 0 14570 361998.125 0.7929322428906965 -3 0.3017196655273437 20 3 GYW[C(Carbamidomethyl (C))M]{M(Oxidation (M))|F}{I|L}K 8 -1 15.61 0.0 0.0 0.48855 0.0 0.0 1653.57844835561 453.20115076236567 2106.779599117976 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYW[C(Carbamidomethyl (C))M]{M(Oxidation (M))|F}{I|L}K 0.48855 - 348 + 1 1.155 135964.5 1.0 9032 5556 14570 HBL1_DMSO_200M_050219_1,14590 HBL1_DMSO_200M_050219_1,14590, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14592 72.075 2.0 78741000.0 25 0 21567000.0 -1 0 43 1162.797886063532 3485.371828790796 3 1163.466601550579 MULTI CID FTMS 0 0 0 14591 114073216.0 0.9799913857345592 -2 0.1876449584960937 1 3 E 1 -1 6.9897 0.0 0.0 0.20054 0.0 0.0 2829.1429605538133 524.1628512018186 3353.305811755632 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20054 - 18 + 1 1.143 141672.8 1.0 9033 5557 14591 HBL1_DMSO_200M_050219_1,14592 HBL1_DMSO_200M_050219_1,14592, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14593 72.08 250.0 673490.0 25 0 114910.0 -1 0 119 320.211539464139 319.204262997539 1 320.2116882205009 MULTI CID FTMS 0 0 0 14591 280446.1875 0.0416171888523776 36 -2.8599090576171875 2 3 HP 2 -1 31.402 0.0 0.0 9.8376 0.0 0.0 0.0 82.06710992984608 82.06710992984608 7.693669874086435 0.0 0.0 0.0 0 0.5484550065040282 1.0969100130080565 0.0 0.0 HP 9.8376 - 13 + 1 1.143 135093.1 1.0 9034 5557 14591 HBL1_DMSO_200M_050219_1,14593 HBL1_DMSO_200M_050219_1,14593, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14594 72.083 144.0 488510.0 25 0 128010.0 -1 0 75 378.238559094459 377.231282627859 1 378.2382995486259 MULTI CID FTMS 0 0 0 14591 513251.90625 0.7034732190744701 1 -0.17181396484375 3 3 {M(Oxidation (M))|F}V{I|L} 3 -1 + 24.425 0.0 0.0 6.4747 6.4747 77.563 0.0 0.0 0.0 4.477437731477419 0.2680249241196719 0.2680249241196719 0.2680249241196719 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}V{I|L};{M(Oxidation (M))|F}{I|L}V;[{M(Oxidation (M))|F}V]{I|L} 6.4747;6.4037;5.2878 -;-;- 24 + 1 1.143 62712.7 1.0 9035 5557 14591 HBL1_DMSO_200M_050219_1,14594 HBL1_DMSO_200M_050219_1,14594, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14595 72.087 243.0 453670.0 25 0 40190.0 + 24933 MPPMPVASV 9 147 464.7347640449446 927.4549751566892 2 464.7351867556572 MULTI CID FTMS 0 0 0 14591 371315.0625 1.0 0 0.0 4 Unmodified _MPPMPVASV_ nc|ENSG00000288701|Q5JSZ5-2|PRRC2B;nc|ENSG00000288701|Q5JSZ5-3|PRRC2B;nc|ENSG00000288701|Q5JSZ5-4|PRRC2B;nc|ENSG00000288701|Q5JSZ5-5|PRRC2B;nc|ENSG00000288701|Q5JSZ5|PRRC2B 70.86452775946826 0.0207647612749057 3 {NN|[MP]|[D{I|L}]|[EV]}PMPVA[VS] 9 0 + 39.415 0.0 0.0 4.2498 4.2498 76.559 0.0 0.0 0.0 4.170839388698887 4.170839388698887 4.170839388698887 4.170839388698887 0 0.7742275032520141 0.6020599913279624 0.0 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}PMPVA[VS];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VP[HD]SV;[VS]{[YD]|[{M(Oxidation (M))|F}M]}KM[VS];{NN|[MP]|[D{I|L}]|[EV]}P[VP]MA[VS];{NN|[MP]|[D{I|L}]|[EV]}P[VP]AM[VS];[PA][C(Carbamidomethyl (C))Q]PVA[VS];[QA][HK]GAM[VS];[QA][HK]GMA[VS];[EP]{[ET]|[MV]}PVA[VS];[QA][HQ]KM[VS] 4.2498;3.8001;2.8009;2.7714;2.7714;2.3565;2.2974;2.2974;1.9364;1.7887 +;-;-;-;-;-;-;-;-;- + 810 1 1.143 89992.0 1.0 9036 5557 14591 HBL1_DMSO_200M_050219_1,14595 HBL1_DMSO_200M_050219_1,14595,MPPMPVASV True True MPPMPVASV 72.087462 464.735186755657 5267891.0 14591.0 nc|ENSG00000288701|Q5JSZ5-5|PRRC2B;;nc|ENSG00000288701|Q5JSZ5|PRRC2B;;nc|ENSG00000288701|Q5JSZ5-2|PRRC2B;;nc|ENSG00000288701|Q5JSZ5-4|PRRC2B;;nc|ENSG00000288701|Q5JSZ5-3|PRRC2B 6.633974393208821 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14596 72.096 495.0 256690.0 25 0 74389.0 -1 0 65 1192.149020807008 3573.425233021225 3 1192.819140613079 MULTI CID FTMS 0 0 0 14591 333935.71875 1.0 0 0.0 5 3 {M(Oxidation (M))|F}Y 2 -1 7.9588 0.0 0.0 0.22272 0.0 0.0 1559.5772848784495 1700.7222384088502 3260.2995232873 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.22272 - 19 + 1 1.143 109272.1 1.0 9037 5557 14591 HBL1_DMSO_200M_050219_1,14596 HBL1_DMSO_200M_050219_1,14596, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14597 72.098 73.0 577180.0 25 0 50870.0 + 37204 TIHVGFDAV 9 78 479.7525857754512 957.4906186177024 2 479.7538329958916 MULTI CID FTMS 0 0 0 14591 326211.65625 0.6581675520817374 -1 0.0662918090820312 6 Unmodified _TIHVGFDAV_ ENSG00000077264|ENST00000372007|PAK3;ENSG00000149269|ENST00000356341|PAK1;ENSG00000180370|ENST00000327134|PAK2;ENST00000533568.5_1_11:77069900-77103583:-|nuORF;ENST00000556425.2_1_15:21937379-21938108:-|nuORF;nc|ENSG00000077264|O75914-3|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000149269|Q13153-2|PAK1 23.1484247019978 0.2366544122328345 3 AV 2 7 22.959 0.0 0.0 2.3978 0.0 0.0 769.3738106116461 0.0 769.3738106116461 0.0 7.139472062827393 0.0 0.0 0 0.5 0.0 0.0 0.0 + AV 2.3978 + + 64 + 1 1.143 43036.3 1.0 9038 5557 14591 HBL1_DMSO_200M_050219_1,14597 HBL1_DMSO_200M_050219_1,14597,TIHVGFDAV False True TIHVGFDAV 72.097937 479.753832995892 4387727.0 14591.0 ENST00000533568.5_1_11:77069900-77103583:-|nuORF;;ENSG00000180370|ENST00000327134|PAK2;;nc|ENSG00000077264|O75914-3|PAK3;;ENSG00000077264|ENST00000372007|PAK3;;nc|ENSG00000077264|O75914-4|PAK3;;nc|ENSG00000149269|Q13153-2|PAK1;;ENST00000556425.2_1_15:21937379-21938108:-|nuORF;;ENSG00000149269|ENST00000356341|PAK1;;nc|ENSG00000077264|O75914|PAK3 4.087458769480388 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14598 72.105 419.0 252950.0 25 0 9368.1 -1 0 94 872.3464024916311 3485.3565041001243 4 873.1014892458916 MULTI CID FTMS 0 0 0 14591 310213.53125 1.0 0 0.0 7 3 {I|L}NA[YC(Carbamidomethyl (C))]QTVA 9 -1 23.427 0.0 0.0 0.67214 0.0 0.0 2209.73100243893 252.13630090885 2461.86730334778 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 {I|L}NA[YC(Carbamidomethyl (C))]QTVA 0.67214 - 3753 + 1 1.143 82243.7 1.0 9039 5557 14591 HBL1_DMSO_200M_050219_1,14598 HBL1_DMSO_200M_050219_1,14598, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14599 72.108 111.0 673630.0 25 0 73749.0 3143 AVQGFIINI 9 124 487.7881853880047 973.5618178428092 2 487.7887145876884 MULTI CID FTMS 0 0 0 14591 310182.59375 1.0 0 0.0 8 Unmodified _AVQGFIINI_ ENSG00000172361|ENST00000398545|CFAP53 18.13498045792455 0.3457906370836843 3 {NN|[MP]|[D{I|L}]|[EV]}K 3 8 23.983 0.0 0.0 2.4635 0.0 0.0 0.0 614.3314766164999 614.3314766164999 -4.166316157790675 0.0 -4.166316157790675 0.0 0 0.0 1.2218487496163564 0.0 0.1307196863200844 {NN|[MP]|[D{I|L}]|[EV]}K 2.4635 - 510 1 1.143 59571.7 1.0 9040 5557 14591 HBL1_DMSO_200M_050219_1,14599 HBL1_DMSO_200M_050219_1,14599,AVQGFIINI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14600 72.119 673.0 199410.0 25 0 14416.0 5486 DLSCSSGDPQF 11 172 385.8251214862625 1154.4535350589874 3 385.8250305056572 MULTI CID FTMS 0 0 0 14591 265825.375 0.4089138320975177 6 -0.5837554931640625 9 Unmodified _DLSCSSGDPQF_ ENST00000542591.1_1_19:36257819-36258019:+|nuORF 8.155526934196011 0.8366696279279818 3 [DP]VVNT 6 10 26.291 0.0 0.0 2.2773 0.0 0.0 0.0 526.1241642916624 526.1241642916624 9.0847168161135 0.0 0.0 0.0 0 0.0 0.6575773191777937 0.0 0.6861818737241735 [DP]VVNT 2.2773 - 543 1 1.143 109397.3 1.0 9041 5557 14591 HBL1_DMSO_200M_050219_1,14600 HBL1_DMSO_200M_050219_1,14600,DLSCSSGDPQF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14601 72.13 594.0 257640.0 25 0 30101.0 + 11852 GLSFSPHSL 9 178 472.74718102238654 0 472.7479736208916 PEAK CID FTMS 0 0 0 14591 232031.28125 1.0 0 0.0 10 Unmodified _GLSFSPHSL_ REV__ENST00000541442.5_1_16:31504873-31505170:-|nuORF 24.67388899826682 0.1587009629985955 3 T{I|L}N 3 -1 14.253 0.0 0.0 1.5106 0.0 0.0 404.2069892826102 208.07283960513908 612.2798288877493 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 T{I|L}N 1.5106 - 220 + 1 1.143 116825.3 1.0 9042 5557 14591 HBL1_DMSO_200M_050219_1,14601 HBL1_DMSO_200M_050219_1,14601,GLSFSPHSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14602 72.138 476.0 229430.0 25 0 13038.0 26789 PALVRRPWSL 10 142 597.8562718837777 1193.697990834355 2 598.3600341677666 MULTI CID FTMS 0 0 0 14591 236031.140625 0.5043410543690993 -6 0.5120468139648438 11 Unmodified _PALVRRPWSL_ ENST00000273153.9_1_3:39185300-39185399:-|nuORF 7.289230182591677 0.6929195370588109 3 [PA]V{I|L}V 5 7 20.802 0.0 0.0 1.7427 0.0 0.0 0.0 711.3624860338272 711.3624860338272 4.235162698957279 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.0 0.0 [PA]V{I|L}V 1.7427 - 303 1 1.143 83275.5 1.0 9043 5557 14591 HBL1_DMSO_200M_050219_1,14602 HBL1_DMSO_200M_050219_1,14602,PALVRRPWSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14603 72.147 488.0 246830.0 25 0 17998.0 + -1 MFDEHCQCV 9 178 592.7117735031193 1183.4089940730385 2 592.7133666872978 MULTI CID FTMS 0 0 0 14591 218675.546875 0.098397629767104 6 -0.5837554931640625 12 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FDEHCQC(Carbamidomethyl (C))V_ REV__ENSG00000120332|ENST00000239462|TNN 4.75600775471527 0.7486543447549536 3 {I|L} 1 -1 13.099 0.0 0.0 1.1069 0.0 0.0 1052.3137925122946 0.0 1052.3137925122946 0.0 -0.3959062302381255 -0.3959062302381255 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1069 - 541 + 1 1.143 90277.2 1.0 9044 5557 14591 HBL1_DMSO_200M_050219_1,14603 HBL1_DMSO_200M_050219_1,14603,MFDEHCQCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14604 72.157 514.0 229320.0 25 0 14251.0 + 10293 FRREWCRYRWR 11 131 857.436950135661 1712.859347338122 2 857.4334594607353 MULTI CID FTMS 0 0 0 14591 200716.21875 1.0 0 0.0 13 Unmodified _FRREWCRYRWR_ REV__ENST00000328599.4_1_8:125463328-125463391:+|nuORF 0.0 0.8751479354844584 3 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NA[HN]TNHN{I|L}Q 15 -1 + 106.89 0.0 0.0 6.2403 6.2403 91.766 0.0 0.0 0.0 54.669650924060136 2.993493689375839 2.993493689375839 24.30400924012389 0 2.417735320183944 1.6989700043360187 0.0 3.0471062485323515 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NA[HN]TNHN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNADT[HN]AN{I|L}{[HG]|PP}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PNADT[HN]ANP[{I|L}P]{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PNWT[HN]AN{I|L}{[HG]|PP}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PM{I|L}NACMTNHN{I|L}Q;[NP]{I|L}NADT[HN]AN{I|L}{[HG]|PP}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}RHQDAN{I|L}{[HG]|PP}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PNADTMCA[VP]{I|L}E{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PDANT[HN]AN{I|L}{[HG]|PP}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PNWT[HN]ANP[{I|L}P]{I|L}{I|L} 6.2403;4.8214;4.6009;4.5481;4.4732;4.4729;4.3723;4.3563;4.3537;4.3276 -;-;-;-;-;-;-;-;-;- 8880 + 1 1.143 82935.2 1.0 9045 5557 14591 HBL1_DMSO_200M_050219_1,14604 HBL1_DMSO_200M_050219_1,14604,FRREWCRYRWR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14605 72.168 612.0 321210.0 25 0 50281.0 18843 LASPHSPIL 9 190 467.7714589396702 933.5283649461404 2 467.7722350955009 MULTI CID FTMS 0 0 0 14591 179513.53125 0.0056135255833952 26 -2.020668029785156 14 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 42.09456458481378 0.0639583784996157 3 {[VA]|[{I|L}G]}PTHSP{I|L}{I|L} 9 3 + 43.25 0.0 0.0 4.6329 4.6329 77.354 0.0 0.0 0.0 3.779897817176476 9.181658086739752 3.779897817176476 3.779897817176476 0 0.9247425010840048 1.154901959985743 0.9634679910804403 0.0 {[VA]|[{I|L}G]}PTHSP{I|L}{I|L};[{I|L}P]GTHSP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]SP{I|L}{I|L};[VP]ATHSP{I|L}{I|L};{[TV]|[{I|L}S]}[PA]HSP{I|L}{I|L};[PS]H[{I|L}A]SP{I|L}{I|L};[PG]{I|L}THSP{I|L}{I|L};[PS][{I|L}A]HSP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L};[{I|L}A][PS]HSP{I|L}{I|L} 4.6329;4.228;4.208;3.4397;3.3458;3.3407;3.0112;2.8036;2.7237;2.6736 -;-;-;-;-;-;-;-;-;+ + 2179 1 1.143 149338.0 1.0 9046 5557 14591 HBL1_DMSO_200M_050219_1,14605 HBL1_DMSO_200M_050219_1,14605,LASPHSPIL True False SPHPVTALL 72.168124 467.772235095501 0.0 14591.0 ENSG00000181143|ENST00000397910|MUC16 2.5043580140918493 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14606 72.181 772.0 390700.0 25 0 93331.0 -1 0 233 304.23827761864953 0 304.2381774783134 PEAK CID FTMS 0 0 0 14591 173352.890625 0.8690000916420134 1 -0.17181396484375 15 3 P 1 -1 5.4846 0.0 0.0 0.90435 0.0 0.0 84.16422505976159 422.2207125299438 506.3849375897054 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.90435 - 20 + 1 1.143 240671.8 1.0 9047 5557 14591 HBL1_DMSO_200M_050219_1,14606 HBL1_DMSO_200M_050219_1,14606, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14607 72.194 633.0 449990.0 25 0 34182.0 + 22437 LPTMPPVSP 9 231 469.7540989887669 0 469.7542907595634 PEAK CID FTMS 0 0 0 14591 149150.4375 0.2802825602604562 10 -1.0471572875976562 16 Unmodified _LPTMPPVSP_ REV__ENSG00000244462|ENST00000374114|RBM12 54.773552608820026 0.0223190572393154 3 PPME{I|L} 5 -1 21.688 0.0 0.0 2.3134 0.0 0.0 301.16028430390264 66.03586755924061 367.19615186314326 0.0 0.0 0.0 0.0 0 1.024227503252014 0.0 0.6989700043360187 0.0 PPME{I|L} 2.3134 - 475 + 1 1.143 216558.6 1.0 9048 5557 14591 HBL1_DMSO_200M_050219_1,14607 HBL1_DMSO_200M_050219_1,14607,LPTMPPVSP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14608 72.208 800.0 305900.0 25 0 22566.0 + 12191 GQRLQPMLV 9 264 347.86779185504184 1040.5815461653256 3 348.2018005251884 MULTI CID FTMS 0 0 0 14591 145163.25 0.52783541328713 -6 0.5120468139648438 17 Unmodified _GQRLQPMLV_ ENSG00000145198|ENST00000691901|VWA5B2;ENST00000461141.5_1_3:183952309-183959823:+|nuORF 11.640296217721598 0.521594087909532 3 {I|L}MPK 4 7 21.899 0.0 0.0 2.1045 0.0 0.0 145.07130376480762 423.2126864068969 568.2839901717045 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 {I|L}MPK 2.1045 - 718 + 1 1.143 208417.2 0.9800000190734864 9049 5557 14591 HBL1_DMSO_200M_050219_1,14608 HBL1_DMSO_200M_050219_1,14608,GQRLQPMLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14609 72.218 571.0 91688.0 25 0 5932.2 37280 TIPQKAKEAIL 11 116 606.369916658782 1210.725280384364 2 606.8716308474541 MULTI CID FTMS 0 0 0 14591 119816.25 0.6000014553570402 -2 0.1876449584960937 18 Unmodified _TIPQKAKEAIL_ ENSG00000126822|ENST00000247226|PLEKHG3;ENST00000490180.2_1_14:65198440-65203695:+|nuORF;nc|ENSG00000126822|A1L390-3|PLEKHG3 8.745405648335112 0.8338865417133445 3 [QT]{M(Oxidation (M))|F}[WR]PA{I|L} 8 7 16.35 0.0 0.0 1.3504 0.0 0.0 0.0 208.1708119607889 208.1708119607889 1.4116671704172763 0.0 0.0 0.0 0 0.0 0.0 0.1595680409956017 0.2614393726401688 [QT]{M(Oxidation (M))|F}[WR]PA{I|L} 1.3504 - 537 1 1.143 45397.1 1.0 9050 5557 14591 HBL1_DMSO_200M_050219_1,14609 HBL1_DMSO_200M_050219_1,14609,TIPQKAKEAIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14610 72.229 601.0 69345.0 25 0 7282.1 + -1 LDWQRCQEER 10 87 710.3243896365166 0 710.3243896365166 PEAK CID FTMS 0 0 0 -1 0 19 Carbamidomethyl (C) _LDWQRC(Carbamidomethyl (C))QEER_ REV__ENSG00000087116|ENST00000251582|ADAMTS2 1.4819007175156935 0.3961065659209837 3 E 1 -1 10.242 0.0 0.0 0.72198 0.0 0.0 708.2864613025268 578.2798555963499 1286.5663168988767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 E 0.72198 + + 13 + 1 1.143 41650.4 1.0 9051 5557 14591 HBL1_DMSO_200M_050219_1,14610 HBL1_DMSO_200M_050219_1,14610,LDWQRCQEER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14611 72.243 800.0 331100.0 25 0 44394.0 + 16253 IVRFKPND 8 228 330.1908116819997 0 330.1909057497978 PEAK CID FTMS 0 0 0 14591 114449.53125 0.7418201506149806 -11 0.8260345458984375 20 Unmodified _IVRFKPND_ REV__ENSG00000138031|ENST00000679454|ADCY3;REV__ENST00000485887.1_1_2:25043436-25046221:-|nuORF;REV__nc|ENSG00000138031|O60266-2|ADCY3 14.581692164780916 0.4900557725783909 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.143 209947.7 0.8199999928474426 9052 5557 14591 HBL1_DMSO_200M_050219_1,14611 HBL1_DMSO_200M_050219_1,14611,IVRFKPND False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14613 72.247 1.8 32483000.0 25 0 5192500.0 + 3094 AVPDEIPPLE 10 74 540.2848465386849 1078.5551401441696 2 540.2849609255791 MULTI CID FTMS 0 0 0 14612 32669626.0 0.8130003605412938 -1 0.17181396484375 1 Unmodified _AVPDEIPPLE_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 30.7034409873982 0.2788461460996952 3 [DP]E{I|L}AVPP{I|L}E 10 4 [DP]E{I|L}AV + + 36.573 22.017 3.5266 3.3909 3.3909 51.014 0.0 0.0 0.0 0.0 1.3348725151397076 0.0 0.0 0 0.4247425010840047 0.0 0.8169015600442578 0.0 [DP]E{I|L}AVPP{I|L}E 3.3909 - 216 + 1 1.13 55384.1 1.0 9053 5558 14612 HBL1_DMSO_200M_050219_1,14613 HBL1_DMSO_200M_050219_1,14613,AVPDEIPPLE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14614 72.248 12.0 3709600.0 25 0 438720.0 + 17811 KQLDDLKVEL 10 88 600.8452342256743 1199.6759155181485 2 600.8457519412041 MULTI CID FTMS 0 0 0 14612 2783847.75 0.0082847230482267 12 -1.0675048828125 2 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 43.476825903602695 0.120852566744744 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L} 10 4 + 82.675 0.0 0.0 6.8915 6.8915 89.143 0.0 0.0 0.0 10.400990676322904 16.53212513775344 10.400990676322904 8.443350238481031 0 1.7544321917401078 1.3979400086720375 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]D{I|L}KVE{I|L};[KQ]{I|L}DD{I|L}KVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}QD{I|L}KVE{I|L};[K{I|L}]QDD{I|L}KVE{I|L};[K{I|L}]DQD{I|L}KVE{I|L};{[TV]|[{I|L}S]}[VG]QD{I|L}KVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[AG]D{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQ{[TV]|[{I|L}S]}RVE{I|L} 6.8915;6.1877;6.1275;6.0245;5.1817;5.0983;4.9515;4.7114;4.4178;4.4109 -;-;-;+;-;-;-;-;-;- + 586 1 1.13 36210.0 1.0 9054 5558 14612 HBL1_DMSO_200M_050219_1,14614 HBL1_DMSO_200M_050219_1,14614,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14615 72.25 7.7 6083500.0 25 0 414060.0 + 3990 DALRPPLQNI 10 70 568.8250783070122 1135.6356036808245 2 568.8248168826103 MULTI CID FTMS 0 0 0 14612 6408315.5 0.8390724960654047 1 -0.0401153564453125 3 Unmodified _DALRPPLQNI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 53.40400417844725 0.0601721406801337 3 {[DA]|[EG]}{I|L}R[HA]VGAN 10 6 56.903 0.0 0.0 5.0107 0.0 0.0 0.0 128.0743603549055 128.0743603549055 44.91312192373542 0.0 0.0 0.0 0 1.555462187404089 2.0 0.0 0.0 {[DA]|[EG]}{I|L}R[HA]VGAN 5.0107 - 532 1 1.13 40199.6 1.0 9055 5558 14612 HBL1_DMSO_200M_050219_1,14615 HBL1_DMSO_200M_050219_1,14615,DALRPPLQNI True True DALRPPLQNI 72.249538 568.82481688261 620144720.0 14612.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 7.831146717071533 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14616 72.252 88.0 3569800.0 25 0 674080.0 -1 0 108 1170.7819175762638 3509.3239233289914 3 1171.118334949017 MULTI CID FTMS 0 0 0 14612 4764682.0 1.0 0 0.0 4 3 E 1 -1 7.4743 0.0 0.0 0.21298 0.0 0.0 2991.1898856659577 386.0684228361027 3377.258308502061 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 E 0.21298 - 326 + 1 1.13 227665.8 1.0 9056 5558 14612 HBL1_DMSO_200M_050219_1,14616 HBL1_DMSO_200M_050219_1,14616, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14617 72.253 18.0 3652300.0 25 0 347500.0 + 14490 IGHGRNDYIG 10 85 551.2755095255809 0 551.2756225466728 PEAK CID FTMS 0 0 0 14612 3080849.5 1.0 0 0.0 5 Unmodified _IGHGRNDYIG_ REV__ENSG00000147912|ENST00000432825|FBXO10;REV__ENST00000276960.7_1_9:37515899-37521812:-|nuORF;REV__ENST00000541804.1_1_9:37512546-37588833:-|nuORF;REV__nc|ENSG00000147912|Q9UK96-2|FBXO10 10.073929032068715 0.3742530088597855 3 PDE{I|L}P 5 -1 22.251 0.0 0.0 2.0218 0.0 0.0 170.10314780857408 376.15155969791255 546.2547075064866 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 PDE{I|L}P 2.0218 - 48 + 1 1.13 60925.7 1.0 9057 5558 14612 HBL1_DMSO_200M_050219_1,14617 HBL1_DMSO_200M_050219_1,14617,IGHGRNDYIG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14618 72.255 117.0 1301900.0 25 0 108600.0 -1 0 107 882.0841638477418 3524.307549524567 4 882.5862304568291 MULTI CID FTMS 0 0 0 14612 2959351.75 1.0 0 0.0 6 3 DT{M(Oxidation (M))|F}V[HV] 6 -1 20.635 0.0 0.0 0.5855 0.0 0.0 2807.9567058635894 0.0 2807.9567058635894 0.0 9.05812322599475 0.0 0.0 0 0.0 0.0 0.0 0.0 DT{M(Oxidation (M))|F}V[HV] 0.5855 - 240 + 1 1.13 122048.2 1.0 9058 5558 14612 HBL1_DMSO_200M_050219_1,14618 HBL1_DMSO_200M_050219_1,14618, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14619 72.258 140.0 963970.0 25 0 161290.0 -1 0 63 1175.7754873675212 3524.304632702764 3 1176.443896472454 MULTI CID FTMS 0 0 0 14612 2771186.5 1.0 0 0.0 7 3 GC(Carbamidomethyl (C))Y{M(Oxidation (M))|F} 4 -1 11.938 0.0 0.0 0.33874 0.0 0.0 1255.4310254288428 1738.6679600059854 2994.098985434828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GC(Carbamidomethyl (C))Y{M(Oxidation (M))|F} 0.33874 - 113 + 1 1.13 108666.8 1.0 9059 5558 14612 HBL1_DMSO_200M_050219_1,14619 HBL1_DMSO_200M_050219_1,14619, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14620 72.259 19.0 3626200.0 25 0 477650.0 + 7549 EIHSGLLEV 9 79 498.7717385280703 995.5289241229406 2 498.7717162966728 MULTI CID FTMS 0 0 0 14612 2460641.0 0.6039579622219617 -1 0.17181396484375 8 Unmodified _EIHSGLLEV_ ENSG00000161013|ENST00000292591|MGAT4B;ENST00000523382.5_1_5:179225178-179228384:-|nuORF;nc|ENSG00000161013|Q9UQ53-2|MGAT4B;nc|ENSG00000161013|Q9UQ53-3|MGAT4B 57.47134341890925 0.0274820932774257 3 E{I|L}{I|L}[YN]EV 7 5 41.503 0.0 0.0 4.1689 0.0 0.0 117.07489687860308 0.0 117.07489687860308 0.0 24.33561654977865 0.0 0.0 0 0.0 0.0 1.7302046884880935 0.0 E{I|L}{I|L}[YN]EV 4.1689 - 164 + 1 1.13 55658.6 1.0 9060 5558 14612 HBL1_DMSO_200M_050219_1,14620 HBL1_DMSO_200M_050219_1,14620,EIHSGLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14621 72.262 144.0 1831400.0 25 0 230860.0 -1 0 109 878.5876331525943 3510.321426743977 4 878.8392211794853 MULTI CID FTMS 0 0 0 14612 2300848.75 0.8142408262274267 -1 0.17181396484375 9 3 E 1 -1 9.732 0.0 0.0 0.27724 0.0 0.0 2631.8683150269835 746.3853853815061 3378.2537004084897 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E 0.27724 - 274 + 1 1.13 223484.4 1.0 9061 5558 14612 HBL1_DMSO_200M_050219_1,14621 HBL1_DMSO_200M_050219_1,14621, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14622 72.264 52.0 1627100.0 25 0 272190.0 -1 VAETCICHK 9 79 559.2584665160913 1116.5023800989825 2 559.2591430544853 MULTI CID FTMS 0 0 0 14612 2139318.5 1.0 0 0.0 10 2 Carbamidomethyl (C) _VAETC(Carbamidomethyl (C))IC(Carbamidomethyl (C))HK_ ENST00000232375.7_1_3:48556200-48556449:-|nuORF 20.453626601364224 0.2830276176381075 3 {[VA]|[{I|L}G]}PDE{I|L} 6 -1 56.203 0.0 0.0 5.0338 0.0 0.0 0.0 489.16855798892817 489.16855798892817 33.767959391884546 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.0 {[VA]|[{I|L}G]}PDE{I|L} 5.0338 - 189 + 1 1.13 71055.3 1.0 9062 5558 14612 HBL1_DMSO_200M_050219_1,14622 HBL1_DMSO_200M_050219_1,14622,VAETCICHK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14623 72.265 22.0 1146300.0 25 0 113470.0 + -1 PVAKQPCLV 9 55 506.2842464665213 1010.5539399998428 2 506.2845336794853 MULTI CID FTMS 0 0 0 14612 1781017.25 0.3758915201509461 2 -0.0976104736328125 11 Carbamidomethyl (C) _PVAKQPC(Carbamidomethyl (C))LV_ REV__ENST00000369800.5_1_5:172114116-172114248:+|nuORF 9.347437153973935 0.588369872918737 3 V 1 -1 12.474 0.0 0.0 1.2344 0.0 0.0 893.4745541739622 0.0 893.4745541739622 0.0 1.0475750727131583 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2344 + + 18 + 1 1.13 28448.9 1.0 9063 5558 14612 HBL1_DMSO_200M_050219_1,14623 HBL1_DMSO_200M_050219_1,14623,PVAKQPCLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14624 72.266 26.0 1599400.0 25 0 135890.0 + 10163 FPYIQKGL 8 76 483.2765334702212 964.5385140072424 2 483.2764465212822 MULTI CID FTMS 0 0 0 14612 1525976.5 0.3399649046551959 -4 0.4066238403320312 12 Unmodified _FPYIQKGL_ ENSG00000119285|ENST00000366582|HEATR1 38.15118350030904 0.2652218139009398 3 {M(Oxidation (M))|F}PY{I|L}QKG{I|L} 8 0 + 50.716 0.0 0.0 5.2581 5.2581 85.861 0.0 0.0 0.0 27.24820548532689 7.078343878162343 7.078343878162343 9.262137858390815 0 0.2887254899964357 0.0 0.0 0.3494850021680094 + + {M(Oxidation (M))|F}PY{I|L}QKG{I|L};{M(Oxidation (M))|F}PY{I|L}[AG]KG{I|L} 5.2581;4.2978 +;- + 132 + 1 1.13 39639.9 1.0 9064 5558 14612 HBL1_DMSO_200M_050219_1,14624 HBL1_DMSO_200M_050219_1,14624,FPYIQKGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14625 72.267 31.0 1790800.0 25 0 275680.0 + 17820 KQLDDLKVEL 10 84 400.8994160702367 1199.67641881091 3 400.8993713259697 MULTI CID FTMS 0 0 0 14612 1454186.25 0.0070362933818539 14 -1.182861328125 13 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 41.34703777101937 0.1433426498679313 3 [KQ]{I|L}DD{I|L}K 7 3 48.307 0.0 0.0 4.0266 0.0 0.0 0.0 356.1854879849913 356.1854879849913 30.05735720125429 0.0 0.0 0.0 0 0.5 0.0 0.805462187404089 1.1307196863200843 + [KQ]{I|L}DD{I|L}K 4.0266 + + 181 1 1.13 47084.6 1.0 9065 5558 14612 HBL1_DMSO_200M_050219_1,14625 HBL1_DMSO_200M_050219_1,14625,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14626 72.268 27.0 2274600.0 25 0 382580.0 + 23782 LVDASGEFTE 10 92 534.2491331282481 1066.483713323296 2 534.2490722537041 MULTI CID FTMS 0 0 0 14612 1370818.5 0.8434176411450341 -1 0.17181396484375 14 Unmodified _LVDASGEFTE_ REV__ENSG00000038427|ENST00000265077|VCAN;REV__ENST00000513016.5_1_5:82832752-82876250:+|nuORF;REV__nc|ENSG00000038427|P13611-2|VCAN;REV__nc|ENSG00000038427|P13611-5|VCAN 19.256988751693697 0.5244284437930726 3 {I|L}VDE 4 -1 50.79 0.0 0.0 4.7624 0.0 0.0 0.0 607.2400606744749 607.2400606744749 28.571231544599485 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}VDE 4.7624 - 299 + 1 1.13 51059.5 1.0 9066 5558 14612 HBL1_DMSO_200M_050219_1,14626 HBL1_DMSO_200M_050219_1,14626,LVDASGEFTE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14627 72.273 249.0 1145800.0 25 0 272040.0 -1 0 107 1180.763633080028 3539.2690698402844 3 1181.097460925579 MULTI CID FTMS 0 0 0 14612 1305415.625 0.7977813613883699 -1 0.17181396484375 15 3 YYC(Carbamidomethyl (C))YV 5 -1 18.672 0.0 0.0 0.52757 0.0 0.0 1618.5378209162593 1169.4065645807252 2787.9443854969845 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YYC(Carbamidomethyl (C))YV 0.52757 - 145 + 1 1.13 217092.2 1.0 9067 5558 14612 HBL1_DMSO_200M_050219_1,14627 HBL1_DMSO_200M_050219_1,14627, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14628 72.274 22.0 1636900.0 25 0 148880.0 -1 MPVIPMNTI 9 80 516.2673715880271 0 516.2671386599541 PEAK CID FTMS 0 0 0 14612 1112717.625 0.601181353705028 2 -0.0976104736328125 16 Oxidation (M) _MPVIPM(Oxidation (M))NTI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 38.15118350030904 0.0708063914493946 3 N{I|L}TN 4 -1 12.652 0.0 0.0 1.2277 0.0 0.0 344.19738858445413 241.0659578912719 585.263346475726 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N{I|L}TN 1.2277 - 73 + 1 1.13 35231.4 1.0 9068 5558 14612 HBL1_DMSO_200M_050219_1,14628 HBL1_DMSO_200M_050219_1,14628,MPVIPMNTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14629 72.279 251.0 707550.0 25 0 171630.0 + -1 LPYPDPAI 8 91 886.0769165475697 3540.2785603238785 4 886.3284179568291 MULTI CID FTMS 0 0 0 14612 1065218.25 1.0 0 0.0 17 ENSG00000170606|ENST00000304858|HSPA4 3 {[WT]|[RM]}[KP]YP{I|L} 7 -1 14.938 0.0 0.0 0.42196 0.0 0.0 0.0 2651.789099303663 2651.789099303663 7.938550583941643 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {[WT]|[RM]}[KP]YP{I|L} 0.42196 - 113 1 1.13 150182.6 1.0 9069 5558 14612 HBL1_DMSO_200M_050219_1,14629 HBL1_DMSO_200M_050219_1,14629, False False LPYPDPAI 72.278775 886.328417956829 17547984.0 14612.0 ENSG00000170606|ENST00000304858|HSPA4 2.395847554008166 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14630 72.28 59.0 953590.0 25 0 193070.0 40303 VGVSRRTQKF 10 76 589.3433381765957 1176.6721234199913 2 589.3430053591728 MULTI CID FTMS 0 0 0 14612 1024921.625 0.4920799378971636 -4 0.4066238403320312 18 Unmodified _VGVSRRTQKF_ ENSG00000120896|ENST00000240123|SORBS3;nc|ENSG00000120896|O60504-2|SORBS3 1.4819007175156935 0.719781833666733 3 {I|L} 1 10 8.5835 0.0 0.0 0.72947 0.0 0.0 1045.5769218592477 0.0 1045.5769218592477 0.0 8.58349385648225 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.72947 - 3 + 1 1.13 48051.6 1.0 9070 5558 14612 HBL1_DMSO_200M_050219_1,14630 HBL1_DMSO_200M_050219_1,14630,VGVSRRTQKF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14631 72.282 64.0 557940.0 25 0 87309.0 + 9112 FFPDKPITQY 10 56 628.3202242708975 1254.6258956085949 2 628.3231689333916 MULTI CID FTMS 0 0 0 -1 0 19 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 21.53697664764585 0.484802182336468 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P[DP]T[K{I|L}]QY 10 3 + 21.362 0.0 0.0 1.7026 1.7026 75.409 0.0 0.0 0.0 4.259687322722808 7.596678446896306 4.259687322722808 7.596678446896306 0 0.0 0.0 0.3252574989159953 0.3494850021680094 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P[DP]T[K{I|L}]QY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P[DP]T[K{I|L}]YQ;{[ET]|[MV]}P[RH]{[QD]|[EN]|[WG]|[KD]|[RS]}P[{M(Oxidation (M))|F}E];[DP]KV{[HG]|PP}{[ET]|[MV]}P[{M(Oxidation (M))|F}E] 1.7026;1.0971;0.49982;0.45671 -;-;-;- 124 + 1 1.13 35755.3 1.0 9071 5558 14612 HBL1_DMSO_200M_050219_1,14631 HBL1_DMSO_200M_050219_1,14631,FFPDKPITQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14632 72.283 47.0 793260.0 25 0 95933.0 + 43676 YATLHINLV 9 79 522.2960028201737 1042.5774527071474 2 522.2965576052666 MULTI CID FTMS 0 0 0 14612 907780.375 0.1306929525274724 11 -0.9969482421875 20 Unmodified _YATLHINLV_ REV__ENSG00000175581|ENST00000310614|MRPL48;REV__ENST00000543374.1_1_11:73555872-73556061:+|nuORF;REV__ENST00000544140.5_1_11:73555872-73571072:+|nuORF;REV__nc|ENSG00000175581|Q96GC5-3|MRPL48 4.75600775471527 0.7486543447549536 3 V 1 -1 10.379 0.0 0.0 0.99548 0.0 0.0 925.4975709706224 0.0 925.4975709706224 0.0 10.289959734888432 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.99548 + + 25 + 1 1.13 36215.6 1.0 9072 5558 14612 HBL1_DMSO_200M_050219_1,14632 HBL1_DMSO_200M_050219_1,14632,YATLHINLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14634 72.287 3.4 14029000.0 25 0 2894200.0 + 18340 KVLEYVIKV 9 78 545.8468629368451 1089.6791729404902 2 545.8472778201103 MULTI CID FTMS 0 0 0 14633 20905944.0 1.0 0 0.0 1 Unmodified _KVLEYVIKV_ ENSG00000198681|ENST00000356661|MAGEA1 53.40400417844725 0.0329064971918313 3 KV{I|L}E[YV]{I|L}VK 9 2 + 66.195 0.0 0.0 6.0747 6.0747 78.576 0.0 0.0 0.0 26.935749724493128 1.6481024864599192 1.6481024864599192 1.6481024864599192 0 1.0 1.0457574905606752 1.0 0.3054621874040891 KV{I|L}E[YV]{I|L}VK;KV{I|L}E[YV]{I|L}KV;KV{I|L}[YV]E{I|L}VK;KV{I|L}[YV]E{I|L}KV 6.0747;5.9235;5.6369;5.4856 -;+;-;- + 199 + 1 1.13 43189.4 1.0 9073 5559 14633 HBL1_DMSO_200M_050219_1,14634 HBL1_DMSO_200M_050219_1,14634,KVLEYVIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14635 72.288 15.0 3008700.0 25 0 228270.0 23921 LVPDVVNEV 9 78 492.2744977102584 982.5344424873168 2 492.2744628787041 MULTI CID FTMS 0 0 0 14633 3771126.5 0.7768650108934616 2 -0.2532577514648437 2 Unmodified _LVPDVVNEV_ ENSG00000156697|ENST00000394422|UTP14A;ENST00000498179.1_1_X:129054707-129055571:+|nuORF;nc|ENSG00000156697|Q9BVJ6-2|UTP14A;nc|ENSG00000156697|Q9BVJ6-3|UTP14A 15.847184025352805 0.4077185912009129 3 [DP]VVNE 6 3 24.13 0.0 0.0 2.4559 0.0 0.0 0.0 326.20946625124185 326.20946625124185 9.52561882712928 0.0 0.0 0.0 0 0.0 0.0 0.1989700043360188 0.0 + [DP]VVNE 2.4559 + + 140 1 1.13 45601.2 1.0 9074 5559 14633 HBL1_DMSO_200M_050219_1,14635 HBL1_DMSO_200M_050219_1,14635,LVPDVVNEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14636 72.29 33.0 1774800.0 25 0 198360.0 + 15442 IPPVAVRL 8 62 432.78695669087136 863.5593604485427 2 432.7869750857353 MULTI CID FTMS 0 0 0 14633 2512712.75 1.0 0 0.0 3 Unmodified _IPPVAVRL_ ENSG00000111642|ENST00000544040|CHD4;ENST00000535717.1_1_12:6679844-6680280:-|nuORF;nc|ENSG00000111642|Q14839-2|CHD4 18.13498045792455 0.6430038125133779 3 {I|L}PPV 4 4 52.423 0.0 0.0 6.0705 0.0 0.0 0.0 454.2802828424438 454.2802828424438 45.43305028184122 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}PPV 6.0705 + + 16 + 1 1.13 52844.4 1.0 9075 5559 14633 HBL1_DMSO_200M_050219_1,14636 HBL1_DMSO_200M_050219_1,14636,IPPVAVRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14637 72.291 28.0 1850700.0 25 0 219300.0 + + 7804 KILEDDKGAFQL 12 75 459.58540135974096 1375.734374679423 3 459.5854980349541 MULTI CID FTMS 0 0 0 14633 2273002.5 1.0 0 0.0 4 Unmodified _ELIKDFQKQDI_ ENST00000477822.2_1_6:153294165-153294291:-|nuORF;ENSG00000112029|ENST00000229758|FBXO5;nc|ENSG00000112029|Q9UKT4-2|FBXO5 22.65808497894818 0.560183898709508 3 [K{I|L}]{I|L}EDD[KQ]{M(Oxidation (M))|F}[Q{I|L}] 11 -1 + 20.226 0.0 0.0 1.4702 1.4702 70.564 0.0 0.0 0.0 2.340610492820656 -4.237929982047067 -4.237929982047067 3.075769466053078 0 0.3807196863200844 0.0 0.0 0.0 [K{I|L}]{I|L}EDD[KQ]{M(Oxidation (M))|F}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}[K{I|L}]DD[KQ]{M(Oxidation (M))|F}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}[K{I|L}]DD[KQ]T{[WT]|[RM]};{I|L}{I|L}KEDD[KQ]{M(Oxidation (M))|F}[Q{I|L}] 1.4702;1.2466;1.2466;1.0529 -;-;-;- 131 1 1.13 56678.3 1.0 9076 5559 14633 HBL1_DMSO_200M_050219_1,14637 HBL1_DMSO_200M_050219_1,14637,ELIKDFQKQDI False False KILEDDKGAFQL 72.290838 459.585498034954 78359976.0 14633.0 ENST00000477822.2_1_6:153294165-153294291:-|nuORF;;ENSG00000112029|ENST00000229758|FBXO5;;nc|ENSG00000112029|Q9UKT4-2|FBXO5 6.514891942342122 3.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14638 72.292 40.0 1034000.0 25 0 119300.0 -1 IESVTMRNVRR 11 71 688.8735853942422 1375.7326178552844 2 688.8750488162041 MULTI CID FTMS 0 0 0 14633 1751725.875 1.0 0 0.0 5 Oxidation (M) _IESVTM(Oxidation (M))RNVRR_ ENSG00000167210|ENST00000642948|LOXHD1;ENST00000335730.6_1_18:44089558-44181581:-|nuORF;nc|ENSG00000167210|Q8IVV2|LOXHD1 20.41453444215458 0.6105011870913812 3 K{I|L}{I|L}Q 4 -1 41.687 0.0 0.0 3.0302 0.0 0.0 0.0 890.4143770807249 890.4143770807249 4.948925883535736 0.0 0.0 0.0 0 0.5941876774005248 0.0 0.0 0.3807196863200844 K{I|L}{I|L}Q 3.0302 - 201 + 1 1.13 37503.0 1.0 9077 5559 14633 HBL1_DMSO_200M_050219_1,14638 HBL1_DMSO_200M_050219_1,14638,IESVTMRNVRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14639 72.294 64.0 485280.0 25 0 88727.0 + + 18998 LQDSKVIFV 9 62 524.8085839636628 1047.6026149941256 2 524.8079711794853 MULTI CID FTMS 0 0 0 14633 1727857.625 0.8021439737276203 2 -0.2532577514648437 6 Unmodified _LDICIIIFV_ nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;ENST00000591089.1_1_18:77211089-77211992:+|nuORF;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-17|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1 18.13498045792455 0.3457906370836843 3 [Q{I|L}]{[MG]|[TS]}{I|L}Q{I|L}{M(Oxidation (M))|F}V 9 -1 + 48.407 0.0 0.0 4.6207 4.6207 83.101 0.0 0.0 0.0 10.713337517843648 9.137342758552691 9.137342758552691 9.208187539523747 0 1.1237125054200234 0.0 0.7742275032520141 0.805462187404089 [Q{I|L}]{[MG]|[TS]}{I|L}Q{I|L}{M(Oxidation (M))|F}V;[Q{I|L}]{[MG]|[TS]}{I|L}[AG]{I|L}{M(Oxidation (M))|F}V;[Q{I|L}]{[MG]|[TS]}{I|L}Q{M(Oxidation (M))|F}{I|L}V;{[TV]|[{I|L}S]}[QT]{I|L}Q{I|L}{M(Oxidation (M))|F}V;[Q{I|L}]{[MG]|[TS]}{I|L}[AG]{M(Oxidation (M))|F}{I|L}V;{[TV]|[{I|L}S]}[QT]{I|L}[AG]{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}[QT]{I|L}Q{M(Oxidation (M))|F}{I|L}V;{[TV]|[{I|L}S]}[QT]{I|L}[AG]{M(Oxidation (M))|F}{I|L}V 4.6207;3.7417;3.688;3.5981;2.809;2.7191;2.6653;1.7864 -;-;-;-;-;-;-;- 104 1 1.13 31043.7 1.0 9078 5559 14633 HBL1_DMSO_200M_050219_1,14639 HBL1_DMSO_200M_050219_1,14639,LDICIIIFV False False LQDSKVIFV 72.293576 524.807971179485 5562021.0 14633.0 nc|ENSG00000131196|O95644-6|NFATC1;;nc|ENSG00000131196|O95644-10|NFATC1;;nc|ENSG00000131196|O95644-5|NFATC1;;ENSG00000131196|ENST00000427363|NFATC1;;nc|ENSG00000131196|O95644-11|NFATC1;;nc|ENSG00000131196|O95644-8|NFATC1;;nc|ENSG00000131196|O95644-2|NFATC1;;ENST00000591089.1_1_18:77211089-77211992:+|nuORF;;nc|ENSG00000131196|O95644-4|NFATC1;;nc|ENSG00000131196|O95644-17|NFATC1;;nc|ENSG00000131196|O95644-3|NFATC1 6.331105868021647 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14640 72.298 222.0 789510.0 25 0 171640.0 -1 0 72 1106.4452860013043 3316.314028604113 3 1106.780322253704 MULTI CID FTMS 0 0 0 14633 1462255.375 1.0 0 0.0 7 3 GT{I|L}NT 5 -1 24.922 0.0 0.0 0.75148 0.0 0.0 2210.7812660082136 616.2754486467278 2827.056714654941 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.7302046884880937 GT{I|L}NT 0.75148 - 274 + 1 1.13 145450.2 1.0 9079 5559 14633 HBL1_DMSO_200M_050219_1,14640 HBL1_DMSO_200M_050219_1,14640, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14641 72.299 58.0 1405300.0 25 0 183700.0 21073 LPAGGILVF 9 99 443.7734510303929 885.5323491275858 2 443.7736999392509 MULTI CID FTMS 0 0 0 14633 1454637.625 0.0851141220020224 43 -3.3279037475585938 8 Unmodified _LPAGGILVF_ ENSG00000150990|ENST00000308736|DHX37 28.17323086031832 0.1727213568982648 3 {I|L}P 2 7 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3748770484327 672.3748770484327 18.3888594289104 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 234 + 1 1.13 66643.5 1.0 9080 5559 14633 HBL1_DMSO_200M_050219_1,14641 HBL1_DMSO_200M_050219_1,14641,LPAGGILVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14642 72.301 47.0 1699100.0 25 0 152430.0 + 22426 LPTGKQFLV 9 108 501.80307608965927 1001.5915992461186 2 501.8031188845634 MULTI CID FTMS 0 0 0 14633 1430752.875 0.8768272400244249 -1 0.0401153564453125 9 Unmodified _LPTGKQFLV_ ENSG00000144848|ENST00000283290|ATG3;ENST00000465980.1_1_3:112262891-112280447:-|nuORF;ENST00000495756.5_1_3:112255248-112280627:-|nuORF;nc|ENSG00000144848|Q9NT62-2|ATG3 30.7034409873982 0.1405282614900322 3 {I|L}P[R{I|L}][YE]{I|L}V 8 5 + 46.119 0.0 0.0 4.6046 4.6046 71.031 0.0 0.0 0.0 24.62521151114018 1.9504625720438893 1.9504625720438893 0.0346053210950714 0 0.8494850021680094 2.0 0.0 0.0 {I|L}P[R{I|L}][YE]{I|L}V;{I|L}PTGKK{M(Oxidation (M))|F}{I|L}V;{I|L}P[R{I|L}][YE]V{I|L};{I|L}PTGKK{M(Oxidation (M))|F}V{I|L};{I|L}P[KG][KT]{M(Oxidation (M))|F}{I|L}V;{I|L}P[KG][KT]{M(Oxidation (M))|F}V{I|L};{I|L}[{I|L}T]{I|L}{M(Oxidation (M))|F}[WP]{I|L};{I|L}E{I|L}[R{I|L}]{M(Oxidation (M))|F}{I|L}V;{I|L}E{I|L}[R{I|L}]{M(Oxidation (M))|F}V{I|L} 4.6046;4.6012;4.0258;4.0223;3.7098;3.1309;1.1808;1.014;0.43514 -;-;-;-;-;-;-;-;- 839 + 1 1.13 62968.8 1.0 9081 5559 14633 HBL1_DMSO_200M_050219_1,14642 HBL1_DMSO_200M_050219_1,14642,LPTGKQFLV False True LPTGKQFLV 72.300503 501.803118884563 44238692.0 14633.0 ENSG00000144848|ENST00000283290|ATG3;;ENST00000465980.1_1_3:112262891-112280447:-|nuORF;;nc|ENSG00000144848|Q9NT62-2|ATG3;;ENST00000495756.5_1_3:112255248-112280627:-|nuORF 6.071332613627116 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14643 72.302 37.0 1035400.0 25 0 98551.0 + + -1 MPVIPMNTI 9 84 516.2950471203401 1030.57554130748 2 516.2968627810478 MULTI CID FTMS 0 0 0 14633 1348928.125 0.7237167410060561 3 -0.3326416015625 10 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))VAC(Carbamidomethyl (C))SLLLTI_ nc|ENSG00000147162|O15294-3|OGT;ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-4|OGT;nc|ENSG00000147162|O15294-2|OGT 11.640296217721598 0.521594087909532 3 [VP]M{I|L} 4 -1 17.625 0.0 0.0 1.7102 0.0 0.0 0.0 587.305610263442 587.305610263442 -2.8773342044365755 0.0 -2.8773342044365755 0.0 0 0.0 0.619788758288394 0.0 0.0 [VP]M{I|L} 1.7102 - 100 1 1.13 35633.4 1.0 9082 5559 14633 HBL1_DMSO_200M_050219_1,14643 HBL1_DMSO_200M_050219_1,14643,VACSLLLTI False False MPVIPMNTI 72.301682 516.296862781048 61514568.0 14633.0 nc|ENSG00000147162|O15294-3|OGT;;ENSG00000147162|ENST00000373719|OGT;;nc|ENSG00000147162|O15294-4|OGT;;nc|ENSG00000147162|O15294-2|OGT 5.931590874989827 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14644 72.303 68.0 1051400.0 25 0 175730.0 + 38340 TQLPESTSLRL 11 65 622.8462012929227 1243.6778496526454 2 622.8457519412041 MULTI CID FTMS 0 0 0 14633 883688.375 1.0 0 0.0 11 Unmodified _TQLPESTSLRL_ ENSG00000159593|ENST00000290810|NAE1;ENST00000567743.5_1_16:66851261-66857485:-|nuORF;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-3|NAE1;nc|ENSG00000159593|Q13564-4|NAE1 28.23362336080872 0.4292685378469897 3 [QT]{I|L}PES{I|L} 7 4 52.267 0.0 0.0 4.2026 0.0 0.0 0.0 472.24579797916255 472.24579797916255 24.17258943186155 0.0 0.0 0.0 0 1.0 1.154901959985743 0.4247425010840047 0.0 [QT]{I|L}PES{I|L} 4.2026 - 181 + 1 1.13 56971.4 1.0 9083 5559 14633 HBL1_DMSO_200M_050219_1,14644 HBL1_DMSO_200M_050219_1,14644,TQLPESTSLRL False True TQLPESTSLRL 72.303323 622.845751941204 9031854.0 14633.0 nc|ENSG00000159593|Q13564-4|NAE1;;ENST00000567743.5_1_16:66851261-66857485:-|nuORF;;nc|ENSG00000159593|Q13564-3|NAE1;;nc|ENSG00000159593|Q13564-2|NAE1;;ENSG00000159593|ENST00000290810|NAE1 4.982863267262776 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14645 72.306 151.0 1117700.0 25 0 126460.0 + 36299 SYISKVDVL 9 131 512.2899461136537 1022.5653392941076 2 512.2896606326103 MULTI CID FTMS 0 0 0 14633 816811.8125 1.0 0 0.0 12 Unmodified _SYISKVDVL_ ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000394455.6_1_14:68196461-68236507:-|nuORF;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-3|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 32.78568957990786 0.1150597335874693 3 {[{M(Oxidation (M))|F}C]|[YS]}{I|L}S[WR]V{I|L} 8 3 + 31.678 0.0 0.0 3.0979 3.0979 76.446 0.0 0.0 0.0 4.757849998022497 5.290456128172 4.757849998022497 6.690067809585756 0 1.110924374808178 0.0 0.4247425010840047 0.0 {[{M(Oxidation (M))|F}C]|[YS]}{I|L}S[WR]V{I|L};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}S[WR]{I|L}V;{[TV]|[{I|L}S]}RR{M(Oxidation (M))|F}{I|L}[MT];[KS]VDV[YT][{I|L}V];{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{I|L}[C(Carbamidomethyl (C))R][{I|L}V];[K{I|L}][RD]{M(Oxidation (M))|F}{I|L}[MT];{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V[YT][{I|L}V];[{I|L}A]TRS[YT][{I|L}V];[QT]{[TV]|[{I|L}S]}V[YT][{I|L}V];{[TV]|[{I|L}S]}[QT]V[YT][{I|L}V] 3.0979;2.4436;1.2651;0.88176;0.78707;0.78112;0.65119;0.64788;0.33204;0.19259 -;-;-;-;-;-;-;-;-;- 859 + 1 1.13 133917.2 1.0 9084 5559 14633 HBL1_DMSO_200M_050219_1,14645 HBL1_DMSO_200M_050219_1,14645,SYISKVDVL True True SYISKVDVL 72.306344 512.28966063261 7575536.0 14633.0 ENST00000394455.6_1_14:68196461-68236507:-|nuORF;;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;;ENSG00000072121|ENST00000347230|ZFYVE26;;nc|ENSG00000072121|Q68DK2-5|ZFYVE26;;nc|ENSG00000072121|Q68DK2-3|ZFYVE26 4.534027099609375 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14646 72.31 168.0 662150.0 25 0 53509.0 34089 SLLGLGLHPIS 11 135 553.8296007462391 1105.644648559278 2 553.8302490115166 MULTI CID FTMS 0 0 0 14633 811463.125 0.7942997471327529 2 -0.2532577514648437 13 Unmodified _SLLGLGLHPIS_ ENSG00000143753|ENST00000323699|DEGS1 8.155526934196011 0.8366696279279818 3 P{I|L}VER{I|L} 6 9 19.215 0.0 0.0 1.7379 0.0 0.0 380.1982412921077 0.0 380.1982412921077 0.0 7.795158534314254 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}VER{I|L} 1.7379 - 292 + 1 1.13 89118.9 1.0 9085 5559 14633 HBL1_DMSO_200M_050219_1,14646 HBL1_DMSO_200M_050219_1,14646,SLLGLGLHPIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14647 72.312 85.0 1206800.0 25 0 82158.0 + 2316 AQIKEMVEL 9 146 530.7890827109852 1059.5636124887703 2 530.7900268435478 MULTI CID FTMS 0 0 0 14633 749085.3125 0.0612727971829829 7 -0.7013168334960938 14 Unmodified _AQIKEMVEL_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 36.506200033944 0.094635877243972 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VM 4 6 24.157 0.0 0.0 2.2799 0.0 0.0 0.0 566.2963350885374 566.2963350885374 -2.508491328472008 0.0 -2.508491328472008 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VM 2.2799 - 652 + 1 1.13 87728.7 1.0 9086 5559 14633 HBL1_DMSO_200M_050219_1,14647 HBL1_DMSO_200M_050219_1,14647,AQIKEMVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14648 72.314 108.0 678130.0 25 0 60509.0 + 41953 VQIKDVNLEV 10 111 578.8314606981446 1155.6483684630891 2 578.8320800662041 MULTI CID FTMS 0 0 0 14633 753920.4375 0.9895624760048434 -1 0.0401153564453125 15 Unmodified _VQIKDVNLEV_ ENSG00000123609|ENST00000243346|NMI 53.31671820480216 0.0606844387689228 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[QT]{I|L}N{I|L}EV 10 3 + 75.306 0.0 0.0 6.5163 6.5163 77.653 0.0 0.0 0.0 11.967913402005593 16.532125137753447 11.967913402005593 0.2422750325201548 0 0.7059771852360797 0.8860566476931632 0.0 1.3979400086720375 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[QT]{I|L}N{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}[DV]K{I|L}N{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}N{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[QT]{I|L}GG{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[QT]{I|L}QVEV;{[QV]|[N{I|L}]|[RA]|[KV]}[DV]K{I|L}GG{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}[DV]K{I|L}QVEV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[WR]N{I|L}EV;{[QN]|[E{I|L}]|[KN]}[QA]K{I|L}N{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}K{I|L}N{I|L}EV 6.5163;6.4954;5.9301;5.7233;5.7176;5.7023;5.6967;5.5836;5.4807;5.1387 -;-;-;-;-;-;-;-;-;- 2518 1 1.13 62935.7 1.0 9087 5559 14633 HBL1_DMSO_200M_050219_1,14648 HBL1_DMSO_200M_050219_1,14648,VQIKDVNLEV True True VQIKDVNLEV 72.313859 578.832080066204 7113076.5 14633.0 ENSG00000123609|ENST00000243346|NMI 6.318616072336833 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14649 72.316 110.0 916660.0 25 0 128350.0 + -1 GSYPEFVRV 9 119 526.7714148392266 1051.5282767452532 2 527.2709228396416 MULTI CID FTMS 0 0 0 14633 640988.1875 0.6182461571700394 -4 0.3995742797851562 16 2 Oxidation (M) _LM(Oxidation (M))LGEM(Oxidation (M))LTL_ nc|ENSG00000170468|Q9H6W3-2|RIOX1;ENSG00000170468|ENST00000304061|RIOX1 12.531546534597751 0.4974689918368763 3 YPE{M(Oxidation (M))|F}VRV 7 -1 33.387 0.0 0.0 3.1751 0.0 0.0 143.05136548347156 0.0 143.05136548347156 0.0 18.58105221289964 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3807196863200844 YPE{M(Oxidation (M))|F}VRV 3.1751 - 561 + 1 1.13 84049.8 1.0 9088 5559 14633 HBL1_DMSO_200M_050219_1,14649 HBL1_DMSO_200M_050219_1,14649,LMLGEMLTL False False GSYPEFVRV 72.316196 527.270922839642 16423592.0 14633.0 nc|ENSG00000170468|Q9H6W3-2|RIOX1;;ENSG00000170468|ENST00000304061|RIOX1 4.498906056086223 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14650 72.322 333.0 360540.0 25 0 16096.0 -1 YPQICSFCL 9 158 594.2644055430457 1186.5142581528912 2 594.2643920779228 MULTI CID FTMS 0 0 0 14633 618522.4375 1.0 0 0.0 17 2 Carbamidomethyl (C) _YPQIC(Carbamidomethyl (C))SFC(Carbamidomethyl (C))L_ L1PB1_dup10052|chr12:47254957-47257203:+|1.548341044108226|0.3758641288713036|2.04|48.0|83|1|anti-sense 19.438996006549623 0.310492472477042 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPV{M(Oxidation (M))|F}CN{[MS]|[{M(Oxidation (M))|F}A]}V 11 -1 + 37.845 0.0 0.0 3.1896 3.1896 67.257 0.0 0.0 0.0 0.0436480540245014 6.197666015370913 0.0436480540245014 0.0436480540245014 0 0.0 1.2218487496163564 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPV{M(Oxidation (M))|F}CN{[MS]|[{M(Oxidation (M))|F}A]}V;[VP]YQ{M(Oxidation (M))|F}CN{[MS]|[{M(Oxidation (M))|F}A]}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QV{M(Oxidation (M))|F}CN{[MS]|[{M(Oxidation (M))|F}A]}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VQ{M(Oxidation (M))|F}CN{[MS]|[{M(Oxidation (M))|F}A]}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GP{M(Oxidation (M))|F}VCN{[MS]|[{M(Oxidation (M))|F}A]}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{M(Oxidation (M))|F}VCN{[MS]|[{M(Oxidation (M))|F}A]}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPCC[YN]VVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPV{M(Oxidation (M))|F}CGG{[MS]|[{M(Oxidation (M))|F}A]}V;[VP]YQ{M(Oxidation (M))|F}CGG{[MS]|[{M(Oxidation (M))|F}A]}V;[VP]Y[AG]{M(Oxidation (M))|F}CN{[MS]|[{M(Oxidation (M))|F}A]}V 3.1896;3.186;3.0375;2.9858;2.9359;2.7838;2.5634;2.4203;2.4136;2.4136 -;-;-;-;-;-;-;-;-;- 1451 1 1.13 98245.4 1.0 9089 5559 14633 HBL1_DMSO_200M_050219_1,14650 HBL1_DMSO_200M_050219_1,14650,YPQICSFCL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 14651 72.329 406.0 325590.0 25 0 24612.0 15249 IPGDESSNATL 11 155 368.5117006638418 1102.5132725917254 3 368.5113403201103 MULTI CID FTMS 0 0 0 14633 553452.75 1.0 0 0.0 18 Unmodified _IPGDESSNATL_ ENSG00000151276|ENST00000402939|MAGI1;nc|ENSG00000151276|Q96QZ7-3|MAGI1;nc|ENSG00000151276|Q96QZ7-5|MAGI1;nc|ENSG00000151276|Q96QZ7-6|MAGI1;nc|ENSG00000151276|Q96QZ7|MAGI1 18.373094154950223 0.6529654022026722 3 {[VA]|[{I|L}G]}PDEHS 7 7 55.762 0.0 0.0 5.0577 0.0 0.0 0.0 364.1925534525269 364.1925534525269 41.49243537057358 0.0 0.0 0.0 0 0.0 2.0 1.031234684152075 0.0 {[VA]|[{I|L}G]}PDEHS 5.0577 - 230 + 1 1.13 118751.4 1.0 9090 5559 14633 HBL1_DMSO_200M_050219_1,14651 HBL1_DMSO_200M_050219_1,14651,IPGDESSNATL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14652 72.333 173.0 348870.0 25 0 32598.0 + -1 GIMCHSFATL 10 111 548.2519675049215 1094.4893820766429 2 548.2518188357353 MULTI CID FTMS 0 0 0 14633 497775.59375 1.0 0 0.0 19 Oxidation (M) _GIM(Oxidation (M))CHSFATL_ REV__ENST00000370620.5_1_X:135749294-135749660:-|nuORF 26.88365393820708 0.3646707531412818 3 {M(Oxidation (M))|F}TA[{I|L}T] 5 -1 27.307 0.0 0.0 2.495 0.0 0.0 543.194627830275 0.0 543.194627830275 0.0 5.880456295278407 0.0 0.0 0 0.5 0.0 0.7614393726401688 0.0 {M(Oxidation (M))|F}TA[{I|L}T] 2.495 - 167 1 1.13 54455.4 1.0 9091 5559 14633 HBL1_DMSO_200M_050219_1,14652 HBL1_DMSO_200M_050219_1,14652,GIMCHSFATL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14653 72.341 435.0 433650.0 25 0 59324.0 + 22650 LPYQPPAL 8 168 449.7549792615846 897.4954055899692 2 449.7553893923759 MULTI CID FTMS 0 0 0 14633 493641.9375 0.3014587921726303 -4 0.3995742797851562 20 Unmodified _LPYQPPAL_ ENSG00000165684|ENST00000684778|SNAPC4 63.393752934501535 0.1160198504584336 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}PPA{I|L} 8 2 + 60.046 0.0 0.0 6.6904 6.6904 85.733 0.0 0.0 0.0 7.474454207622244 14.62266579556342 7.474454207622244 5.039237471316298 0 0.9929928190999392 1.6989700043360187 0.2887254899964357 0.2614393726401688 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}PPA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QPPA{I|L};{[VA]|[{I|L}G]}A{M(Oxidation (M))|F}{I|L}PPA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QP{I|L}PA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]{I|L}PPA{I|L};[{I|L}P]YQPPA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[AG]PPA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}[HK]{I|L};[Q{I|L}]{M(Oxidation (M))|F}{I|L}PPA{I|L};{[VA]|[{I|L}G]}APYPPA{I|L} 6.6904;6.1289;5.8576;5.4383;5.3671;4.9191;4.8056;4.73;4.6992;4.6972 -;-;-;-;-;+;-;-;-;- + 1181 1 1.13 145896.9 1.0 9092 5559 14633 HBL1_DMSO_200M_050219_1,14653 HBL1_DMSO_200M_050219_1,14653,LPYQPPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14655 72.345 2.4 48642000.0 25 0 13621000.0 -1 0 35 1162.797886063532 3485.371828790796 3 1163.467456042767 MULTI CID FTMS 0 0 0 14654 66161840.0 0.5683896320092193 1 -0.1957626342773437 1 3 E 1 -1 6.9897 0.0 0.0 0.20054 0.0 0.0 2829.1434931619133 524.1627763341546 3353.306269496068 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20054 - 4 + 1 1.125 102379.2 1.0 9093 5560 14654 HBL1_DMSO_200M_050219_1,14655 HBL1_DMSO_200M_050219_1,14655, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14656 72.346 47.0 2673300.0 25 0 371060.0 + 18338 KVLEYVIKV 9 107 364.23396095998015 1089.6800534801405 3 364.2338744997978 MULTI CID FTMS 0 0 0 14654 2229626.75 1.0 0 0.0 2 Unmodified _KVLEYVIKV_ ENSG00000198681|ENST00000356661|MAGEA1 47.74868867922204 0.0453060283459952 3 [{I|L}V]KEY 5 6 38.427 0.0 0.0 3.5265 0.0 0.0 0.0 454.3030855905251 454.3030855905251 8.3731777169336 0.0 0.0 0.0 0 0.7742275032520141 1.3979400086720375 0.7302046884880937 0.25 [{I|L}V]KEY 3.5265 - 240 1 1.125 110314.7 1.0 9094 5560 14654 HBL1_DMSO_200M_050219_1,14656 HBL1_DMSO_200M_050219_1,14656,KVLEYVIKV True True KVLEYVIKV 72.346077 364.233874499798 231222174.0 14654.0 ENSG00000198681|ENST00000356661|MAGEA1 2.81107767422994 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14657 72.349 135.0 828140.0 25 0 58247.0 + 45100 YPYPYPHTLY 10 106 657.3137392995932 1312.6129256659865 2 657.3121215701103 MULTI CID FTMS 0 0 0 14654 632061.375 0.2421078401423701 -3 0.2694244384765625 3 Unmodified _YPYPYPHTLY_ ENSG00000116221|ENST00000360840|MRPL37 71.13359017698441 0.0189001043006994 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}Y{M(Oxidation (M))|F}{I|L}Y 10 5 + 68.616 0.0 0.0 5.2274 5.2274 78.102 0.0 0.0 0.0 5.106194691991476 4.793395554607173 4.793395554607173 3.0102999566398125 0 1.4564608101803795 1.6989700043360187 1.1989700043360187 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}Y{M(Oxidation (M))|F}{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}{M(Oxidation (M))|F}Y{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}YE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYP[HT]{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYP{[WN]|[YH]}[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYP[KS]C[VP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}SKPE{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPQ{[VA]|[{I|L}G]}{[CP]|[EA]}{I|L}Y;[{I|L}T]C{I|L}[QA]YPY{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YA{[VA]|[{I|L}G]}QPY{[QN]|[E{I|L}]|[KN]} 5.2274;4.9981;4.8622;4.8384;3.9905;3.7006;3.1653;3.1622;3.1426;3.0981 -;-;-;+;-;-;-;-;-;- + 1027 1 1.125 87483.1 1.0 9095 5560 14654 HBL1_DMSO_200M_050219_1,14657 HBL1_DMSO_200M_050219_1,14657,YPYPYPHTLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14658 72.358 537.0 351980.0 25 0 93085.0 -1 0 70 1196.1624962539936 3585.465659362181 3 1196.831469714642 MULTI CID FTMS 0 0 0 14654 420896.15625 0.516867777531151 3 -0.3143310546875 4 3 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.26395 0.0 0.0 1896.7029162975311 1481.6491215897993 3378.3520378873304 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.26395 - 66 + 1 1.125 149561.5 1.0 9096 5560 14654 HBL1_DMSO_200M_050219_1,14658 HBL1_DMSO_200M_050219_1,14658, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14659 72.369 622.0 322420.0 25 0 61359.0 + 4941 DGLVLVKV 8 150 421.771042822027 841.5275327108541 2 421.7707702517509 MULTI CID FTMS 0 0 0 14654 302880.25 0.0631597775479771 5 -0.5439987182617188 5 Unmodified _DGLVLVKV_ REV__ENSG00000144840|ENST00000273375|RABL3;REV__ENST00000491398.5_1_3:120457479-120461354:-|nuORF 48.345845343767074 0.1470278396477103 3 [DG]{I|L}V{I|L}VKV 8 -1 [DG]{I|L} + + 41.709 12.976 4.5508 4.9563 4.9563 55.48 0.0 0.0 0.0 0.0 28.299994026595208 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.2614393726401688 [DG]{I|L}V{I|L}VKV 4.9563 + + 282 + 1 1.125 160788.0 1.0 9097 5560 14654 HBL1_DMSO_200M_050219_1,14659 HBL1_DMSO_200M_050219_1,14659,DGLVLVKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14660 72.38 590.0 156860.0 25 0 34076.0 -1 0 55 1066.0960107160452 3195.266202748336 3 1066.433154284954 MULTI CID FTMS 0 0 0 14654 244827.1875 0.5362772829417172 1 -0.1957626342773437 6 3 YG[WY][C(Carbamidomethyl (C))M]{M(Oxidation (M))|F}{I|L}K 9 -1 20.379 0.0 0.0 0.63779 0.0 0.0 1490.536052457123 453.19953333072505 1943.735585787848 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG[WY][C(Carbamidomethyl (C))M]{M(Oxidation (M))|F}{I|L}K 0.63779 - 170 + 1 1.125 83492.0 1.0 9098 5560 14654 HBL1_DMSO_200M_050219_1,14660 HBL1_DMSO_200M_050219_1,14660, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14661 72.391 666.0 328270.0 25 0 23906.0 + 11880 GLVDQLVKA 9 228 471.7843263064052 0 471.7848998904228 PEAK CID FTMS 0 0 0 14654 229692.4375 1.0 0 0.0 7 Unmodified _GLVDQLVKA_ ENSG00000031698|ENST00000234677|SARS1;ENST00000482384.1_1_1:109756587-109756749:+|nuORF 43.85829265575387 0.0484669621479465 3 VDQ 3 6 18.06 0.0 0.0 1.9181 0.0 0.0 170.09848552121042 426.2736605279906 596.3721460492011 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.3807196863200844 + VDQ 1.9181 + + 426 + 1 1.125 167993.0 1.0 9099 5560 14654 HBL1_DMSO_200M_050219_1,14661 HBL1_DMSO_200M_050219_1,14661,GLVDQLVKA True True GLVDQLVKA 72.391092 471.784899890423 1552162.0 14654.0 ENSG00000031698|ENST00000234677|SARS1;;ENST00000482384.1_1_1:109756587-109756749:+|nuORF 6.0599141120910645 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14662 72.401 582.0 259950.0 25 0 19563.0 + 35134 SQYQRFTYL 9 174 603.3011838634183 1204.5878147936364 2 603.2998535037041 MULTI CID FTMS 0 0 0 14654 219573.375 0.1221372862181869 4 -0.4919815063476562 8 Unmodified _SQYQRFTYL_ ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-17|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1 40.72490554402381 0.0714771638475563 3 [YQ]R{M(Oxidation (M))|F}TNTY{I|L} 9 4 + 44.708 0.0 0.0 3.7114 3.7114 70.574 0.0 0.0 0.0 1.2638397748248025 9.646639014871532 1.2638397748248025 1.2638397748248025 0 0.5 0.0 0.7302046884880937 0.3054621874040891 [YQ]R{M(Oxidation (M))|F}TNTY{I|L};[AG]YR{M(Oxidation (M))|F}TNTY{I|L};[KA]{M(Oxidation (M))|F}T{M(Oxidation (M))|F}TNTY{I|L};[YQ]R{[QS]|[NT]}{M(Oxidation (M))|F}TY{I|L};[YQ]R{M(Oxidation (M))|F}TGGTY{I|L};[AG]YR{[QS]|[NT]}{M(Oxidation (M))|F}TY{I|L};[AG]YR{M(Oxidation (M))|F}TGGTY{I|L};[YQ]RYQATY{I|L};[KA]{M(Oxidation (M))|F}T{[QS]|[NT]}{M(Oxidation (M))|F}TY{I|L};[AG]YRYQATY{I|L} 3.7114;3.6065;3.2413;3.0105;2.947;2.9056;2.8457;2.6075;2.5403;2.5026 -;-;-;-;-;-;-;-;-;- 1364 1 1.125 112709.3 1.0 9100 5560 14654 HBL1_DMSO_200M_050219_1,14662 HBL1_DMSO_200M_050219_1,14662,SQYQRFTYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14663 72.412 606.0 327460.0 25 0 16216.0 10766 FYMFQKSSI 9 214 575.785303922906 1149.556054912612 2 575.7885619997978 MULTI CID FTMS 0 0 0 14654 182906.484375 0.1292826336073453 3 -0.3143310546875 9 Unmodified _FYMFQKSSI_ ENST00000460087.1_1_22:50755275-50757393:-|nuORF 13.50788311687929 0.4710407108020397 3 {[WN]|[YH]}{I|L}TMPMV 8 8 38.863 0.0 0.0 3.3807 0.0 0.0 0.0 174.0756614289078 174.0756614289078 17.30835659879972 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.8252574989159953 0.0 {[WN]|[YH]}{I|L}TMPMV 3.3807 - 2764 1 1.125 150438.0 1.0 9101 5560 14654 HBL1_DMSO_200M_050219_1,14663 HBL1_DMSO_200M_050219_1,14663,FYMFQKSSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14664 72.424 610.0 313470.0 25 0 10790.0 + 41821 VPYEEIRMM 9 187 584.2811999711354 0 584.2820312380791 PEAK CID FTMS 0 0 0 14654 175264.953125 0.6956145418662708 1 -0.1957626342773437 10 Unmodified _VPYEEIRMM_ ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-7|DIAPH3 26.268140514670165 0.1442484609216422 3 PYEE{I|L}G{M(Oxidation (M))|F}P 8 3 29.114 0.0 0.0 2.4957 0.0 0.0 99.06760745535082 132.04599939517814 231.11360685052892 0.0 0.0 0.0 0.0 0 0.651387079793446 0.0 0.3494850021680094 0.0 PYEE{I|L}G{M(Oxidation (M))|F}P 2.4957 - 332 + 1 1.125 147627.3 1.0 9102 5560 14654 HBL1_DMSO_200M_050219_1,14664 HBL1_DMSO_200M_050219_1,14664,VPYEEIRMM False True VPYEEIRMM 72.423723 584.282031238079 2043456.375 14654.0 nc|ENSG00000139734|Q9NSV4-6|DIAPH3;;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;;nc|ENSG00000139734|Q9NSV4-1|DIAPH3;;nc|ENSG00000139734|Q9NSV4-7|DIAPH3;;ENSG00000139734|ENST00000400324|DIAPH3;;nc|ENSG00000139734|Q9NSV4-4|DIAPH3 6.167687892913818 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14665 72.435 652.0 272160.0 25 0 14899.0 27991 PLYYKPIQT 9 223 561.8113034623991 1121.608053991598 2 561.8103515505791 MULTI CID FTMS 0 0 0 14654 169237.859375 0.1531974886708892 3 -0.3143310546875 11 Unmodified _PLYYKPIQT_ ENSG00000159433|ENST00000290607|STARD9 16.942295170755138 0.3780752226737986 3 {I|L}{M(Oxidation (M))|F}ET 4 7 31.938 0.0 0.0 2.8475 0.0 0.0 613.3567045995854 0.0 613.3567045995854 0.0 12.853261876534605 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}ET 2.8475 - 1838 1 1.125 136960.2 1.0 9103 5560 14654 HBL1_DMSO_200M_050219_1,14665 HBL1_DMSO_200M_050219_1,14665,PLYYKPIQT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14666 72.448 751.0 399350.0 25 0 30795.0 23336 LTAVNPQPL 9 217 476.7777116279639 0 476.7787353396416 PEAK CID FTMS 0 0 0 14654 162847.796875 0.5132387891726345 1 -0.1957626342773437 12 Unmodified _LTAVNPQPL_ ENSG00000157330|ENST00000614859|CFAP107 26.88365393820708 0.1386685954232994 3 {I|L}PK{I|L}EA 6 8 16.389 0.0 0.0 1.7224 0.0 0.0 215.0543113401091 82.06705652408436 297.1213678641935 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.0 {I|L}PK{I|L}EA 1.7224 - 477 + 1 1.125 225516.7 1.0 9104 5560 14654 HBL1_DMSO_200M_050219_1,14666 HBL1_DMSO_200M_050219_1,14666,LTAVNPQPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14667 72.463 790.0 125050.0 25 0 25896.0 -1 0 65 1144.8080559618163 3431.402338485649 3 1145.140795886517 MULTI CID FTMS 0 0 0 14654 138851.8125 0.0063222910508944 16 -1.1698760986328125 13 3 E 1 -1 6.9897 0.0 0.0 0.2037 0.0 0.0 2775.172253588192 524.1632784479124 3299.3355320361043 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.2037 - 40 + 1 1.125 83795.9 1.0 9105 5560 14654 HBL1_DMSO_200M_050219_1,14667 HBL1_DMSO_200M_050219_1,14667, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14668 72.474 638.0 244180.0 25 0 11033.0 + 16951 KILSPSIMVSA 11 216 573.3331160537043 1144.6516791742083 2 573.3350707888603 MULTI CID FTMS 0 0 0 14654 125710.359375 0.7464969087806366 -2 0.0976104736328125 14 Unmodified _KILSPSIMVSA_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49051556-49052718:+|nuORF 32.518072372473235 0.3286683536057777 3 {[TV]|[{I|L}S]}PS[K{I|L}]{I|L}MV{[SA]|[TG]} 11 4 + 53.082 0.0 0.0 4.6374 4.6374 79.014 0.0 0.0 0.0 7.160324811776029 11.481327510349097 7.160324811776029 5.115166698372136 0 0.8252574989159953 1.154901959985743 1.45205343810445 0.0 {[TV]|[{I|L}S]}PS[K{I|L}]{I|L}MV{[SA]|[TG]};{[TV]|[{I|L}S]}[K{I|L}][PS]{I|L}MV{[SA]|[TG]};{[TV]|[{I|L}S]}PMS{I|L}[K{I|L}]V{[SA]|[TG]};{NN|[MP]|[D{I|L}]|[EV]}[VG][K{I|L}]{I|L}MV{[SA]|[TG]};[K{I|L}]{I|L}S[PS]{I|L}MV{[SA]|[TG]};{[TV]|[{I|L}S]}PMVT[K{I|L}]V{[SA]|[TG]};[{I|L}P]SS[K{I|L}]{I|L}MV{[SA]|[TG]};[VS][TP][K{I|L}]{I|L}MV{[SA]|[TG]};{[TV]|[{I|L}S]}PSM{I|L}[K{I|L}]V{[SA]|[TG]};{[TV]|[{I|L}S]}MPS{I|L}[K{I|L}]V{[SA]|[TG]} 4.6374;4.1905;4.0033;3.9694;3.931;3.4773;3.439;3.3733;3.265;3.2043 -;-;-;-;+;-;-;-;-;- + 6191 1 1.125 118467.2 1.0 9106 5560 14654 HBL1_DMSO_200M_050219_1,14668 HBL1_DMSO_200M_050219_1,14668,KILSPSIMVSA False True KILSPSIMVSA 72.474074 573.33507078886 1744212.25 14654.0 ENSG00000178252|ENST00000608424|WDR6;;ENST00000420783.7_1_3:49051556-49052718:+|nuORF 6.452921231587728 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14669 72.487 741.0 75472.0 25 0 15884.0 -1 0 58 1188.4195271456292 3562.236752037088 3 1189.760791003704 MULTI CID FTMS 0 0 0 14654 102041.7109375 1.0 0 0.0 15 3 YYG 3 -1 16.198 0.0 0.0 0.45471 0.0 0.0 1694.43506854275 1481.6442354791627 3176.079304021913 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YYG 0.45471 - 11 + 1 1.125 51050.5 1.0 9107 5560 14654 HBL1_DMSO_200M_050219_1,14669 HBL1_DMSO_200M_050219_1,14669, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14670 72.499 619.0 173590.0 25 0 20528.0 + -1 IDKELDTKYME 11 122 700.8330200888431 1399.651487244486 2 701.3340331912041 MULTI CID FTMS 0 0 0 14654 130494.8203125 0.7323657659782781 1 -0.1957626342773437 16 Oxidation (M) _IDKELDTKYM(Oxidation (M))E_ REV__ENSG00000182718|ENST00000451270|ANXA2;REV__nc|ENSG00000182718|P07355-2|ANXA2;REV__nc|ENSG00000231991|A6NMY6|ANXA2P2 7.608950283845883 0.8392484121837455 3 {[VA]|[{I|L}G]}AE{M(Oxidation (M))|F} 5 -1 21.427 0.0 0.0 1.5309 0.0 0.0 0.0 879.3747898170049 879.3747898170049 -0.8534811358448735 0.0 -0.8534811358448735 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}AE{M(Oxidation (M))|F} 1.5309 - 492 1 1.125 80393.7 1.0 9108 5560 14654 HBL1_DMSO_200M_050219_1,14670 HBL1_DMSO_200M_050219_1,14670,IDKELDTKYME False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14671 72.51 622.0 161640.0 25 0 5220.4 -1 0 151 631.3658502455702 630.3585737789701 1 631.3654662966728 MULTI CID FTMS 0 0 0 14654 126896.8125 0.1153715022731098 5 -0.5439987182617188 17 3 {NN|[MP]|[D{I|L}]|[EV]}SA{I|L}{I|L} 6 -1 + 49.882 0.0 0.0 7.9132 7.9132 86.434 0.0 0.0 0.0 4.880153305975696 13.812281309285616 4.880153305975696 3.138429459400051 0 0.6109243748081782 0.958607314841775 1.2302046884880935 0.0 {NN|[MP]|[D{I|L}]|[EV]}SA{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}S{I|L}A{I|L};{[TV]|[{I|L}S]}DA{I|L}{I|L};[VS]EA{I|L}{I|L};{[TV]|[{I|L}S]}D{I|L}A{I|L};[DV]TA{I|L}{I|L};[VS]E{I|L}A{I|L};[DV]T{I|L}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}VTA{I|L};{[QN]|[E{I|L}]|[KN]}{[SA]|[TG]}V{I|L} 7.9132;7.4153;7.139;6.9156;6.6411;6.6112;6.4177;6.1133;5.0923;4.7158 -;-;-;-;-;-;-;-;-;- 459 1 1.125 85345.0 1.0 9109 5560 14654 HBL1_DMSO_200M_050219_1,14671 HBL1_DMSO_200M_050219_1,14671, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14672 72.524 794.0 67155.0 25 0 14433.0 -1 0 42 1158.457080066204 0 1158.457080066204 PEAK CID FTMS 0 0 0 -1 0 18 3 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 2 -1 9.464 0.0 0.0 0.40883 0.0 0.0 1304.4646229236207 713.3154390924436 2017.780062016064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 0.40883 - 6 + 1 1.125 49801.2 1.0 9110 5560 14654 HBL1_DMSO_200M_050219_1,14672 HBL1_DMSO_200M_050219_1,14672, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14673 72.536 637.0 130210.0 25 0 5379.2 -1 EYLSNWTMEKV 11 144 708.3308638005011 0 708.3284789919853 PEAK CID FTMS 0 0 0 14654 107017.40625 1.0 0 0.0 19 Oxidation (M) _EYLSNWTM(Oxidation (M))EKV_ chrX:130125792-130129502|48|11.67|0.0|20.15|-|ENST00000675050|AIFM1,AIFM1;ENSG00000156709|ENST00000287295|AIFM1;nc|ENSG00000156709|O95831-2|AIFM1;nc|ENSG00000156709|O95831-3|AIFM1 8.745405648335112 0.4618489994582195 3 AE 2 -1 11.242 0.0 0.0 0.7947 0.0 0.0 855.3839433219022 356.1621492975219 1211.546092619424 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 AE 0.7947 - 243 + 1 1.125 65197.0 1.0 9111 5560 14654 HBL1_DMSO_200M_050219_1,14673 HBL1_DMSO_200M_050219_1,14673,EYLSNWTMEKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14675 72.541 5.5 20834000.0 25 0 3459500.0 + 3095 AVPDEIPPLE 10 80 540.2848465386849 1078.5551401441696 2 540.2852661013603 MULTI CID FTMS 0 0 0 14674 14325610.0 0.3565001354767257 2 -0.1185684204101562 1 Unmodified _AVPDEIPPLE_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 57.24910588100465 0.0438022649904578 3 [DP]E{I|L}AVPP{I|L}E 10 4 [DP]E{I|L}AV + + 40.126 30.085 4.8189 3.7203 3.7203 51.767 0.0 0.0 0.0 0.0 -0.0176375834405533 -0.0176375834405533 0.0 0 0.805462187404089 0.0 0.9163865622122672 0.0 [DP]E{I|L}AVPP{I|L}E 3.7203 - 541 + 1 1.139 99466.7 1.0 9112 5561 14674 HBL1_DMSO_200M_050219_1,14675 HBL1_DMSO_200M_050219_1,14675,AVPDEIPPLE True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14676 72.542 60.0 2552800.0 25 0 169240.0 + 3991 DALRPPLQNI 10 152 568.8250783070122 1135.6356036808245 2 568.8249389529228 MULTI CID FTMS 0 0 0 14674 2144749.25 0.2808226446765776 4 -0.348236083984375 2 Unmodified _DALRPPLQNI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 84.5221896805406 0.0133617038110099 3 {[DA]|[EG]}{I|L}RP[{I|L}P]GAN{I|L} 11 2 + 83.013 0.0 0.0 7.3098 7.3098 80.472 0.0 0.0 0.0 0.5231136729799886 0.5231136729799886 0.5231136729799886 0.5231136729799886 0 2.635151878060192 1.6989700043360187 0.0 0.3252574989159953 {[DA]|[EG]}{I|L}RP[{I|L}P]GAN{I|L};{[DA]|[EG]}{I|L}R{I|L}{[HG]|PP}QN{I|L};W{I|L}GV{I|L}{[HG]|PP}QN{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]QN{I|L};W{I|L}GVP[{I|L}P]QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}ARP[{I|L}P]GAN{I|L};{NN|[MP]|[D{I|L}]|[EV]}ARP[{I|L}P]QN{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]GAGG{I|L};{[DA]|[EG]}{I|L}RP[PG]{I|L}AN{I|L};{[DA]|[EG]}{I|L}R{I|L}{[HG]|PP}[AG]N{I|L} 7.3098;7.2637;7.2475;7.1963;7.18;6.7265;6.5676;6.506;6.4742;6.4567 -;-;-;+;-;-;-;-;-;- + 4439 1 1.139 116748.1 1.0 9113 5561 14674 HBL1_DMSO_200M_050219_1,14676 HBL1_DMSO_200M_050219_1,14676,DALRPPLQNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14677 72.543 15.0 11116000.0 25 0 1785900.0 + 22128 LPPQPKVK 8 66 453.7921119878436 905.5696710424872 2 453.7926513552666 MULTI CID FTMS 0 0 0 14674 11295969.0 0.176367063959966 -7 0.6999969482421875 3 Unmodified _LPPQPKVK_ REV__ENSG00000204463|ENST00000676615|BAG6;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6 26.34127834903884 0.4900704351052977 3 {I|L}PPP 4 -1 61.186 0.0 0.0 6.7566 0.0 0.0 0.0 498.3064974420532 498.3064974420532 48.96713777483761 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {I|L}PPP 6.7566 - 96 + 1 1.139 136091.9 1.0 9114 5561 14674 HBL1_DMSO_200M_050219_1,14677 HBL1_DMSO_200M_050219_1,14677,LPPQPKVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14678 72.545 52.0 4911400.0 25 0 424880.0 + 10164 FPYIQKGL 8 135 483.2765334702212 964.5385140072424 2 483.2768127322197 MULTI CID FTMS 0 0 0 14674 2698373.75 0.6011576027827648 -1 0.1957626342773437 4 Unmodified _FPYIQKGL_ ENSG00000119285|ENST00000366582|HEATR1 106.8454739257335 0.061725950463852 3 {M(Oxidation (M))|F}PY{I|L}QKG{I|L} 8 0 + 83.185 0.0 0.0 8.6244 8.6244 94.53 0.0 0.0 0.0 12.5190243216651 9.2478773067036 9.2478773067036 9.2478773067036 0 1.7104093769761874 0.0 0.0 1.174742501084005 + + {M(Oxidation (M))|F}PY{I|L}QKG{I|L};{M(Oxidation (M))|F}PY{I|L}QKAV;{M(Oxidation (M))|F}PY{I|L}[AG]KG{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}QKG{I|L};{M(Oxidation (M))|F}PY{I|L}[AG]KAV;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}QKAV;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}[AG]KG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QKG{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}[AG]KAV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[AG]KG{M(Oxidation (M))|F}{I|L} 8.6244;7.6656;7.6641;7.4302;6.7053;6.4714;6.4699;5.9014;5.5111;4.9411 +;-;-;-;-;-;-;-;-;- + 2641 + 1 1.139 194322.1 1.0 9115 5561 14674 HBL1_DMSO_200M_050219_1,14678 HBL1_DMSO_200M_050219_1,14678,FPYIQKGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14679 72.546 56.0 3593800.0 25 0 462590.0 + 13834 HTVGELIEV 9 148 498.7717385280703 995.5289241229406 2 498.7719909548759 MULTI CID FTMS 0 0 0 14674 2584533.75 0.6343671169194878 2 -0.1185684204101562 5 Unmodified _HTVGELIEV_ ENSG00000002822|ENST00000265854|MAD1L1;ENST00000496548.1_1_7:1855708-1869233:-|nuORF;nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1 61.357469665136826 0.0253304979873734 3 [HT]VGE{I|L}{I|L}EV 9 0 + 67.259 0.0 0.0 6.7562 6.7562 87.036 0.0 0.0 0.0 6.296248734744211 14.973024840566469 6.296248734744211 6.296248734744211 0 0.3252574989159953 0.6020599913279624 1.416386562212267 0.0 + + [HT]VGE{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}ASH{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}AVTH{I|L}EV;{[QN]|[E{I|L}]|[KN]}GSH{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}GVTH{I|L}EV;{[TV]|[{I|L}S]}HGE{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}AS{I|L}H{I|L}EV;{[QN]|[E{I|L}]|[KN]}GS{I|L}H{I|L}EV;{[HG]|PP}VTE{I|L}{I|L}EV;[HT]V{[CP]|[EA]}V{I|L}EV 6.7562;6.1237;6.022;5.8335;5.7318;5.2244;5.0635;4.7733;4.4806;4.3134 +;-;-;-;-;-;-;-;-;- + 1970 1 1.139 154036.7 1.0 9116 5561 14674 HBL1_DMSO_200M_050219_1,14679 HBL1_DMSO_200M_050219_1,14679,HTVGELIEV True True HTVGELIEV 72.545986 498.771990954876 42898944.0 14674.0 ENST00000496548.1_1_7:1855708-1869233:-|nuORF;;nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1;;ENSG00000002822|ENST00000265854|MAD1L1 8.226913134256998 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14680 72.548 72.0 2525400.0 25 0 142310.0 + 16936 KILPDLNTV 9 138 506.80590437340896 0 506.8060180544853 PEAK CID FTMS 0 0 0 14674 2356976.75 0.524271076400084 -1 0.1957626342773437 6 Unmodified _KILPDLNTV_ ENSG00000142207|ENST00000382751|URB1 131.26759243768294 1.9435854781180683e-06 3 TN{I|L}[DP]{I|L}{I|L}G 8 5 42.89 0.0 0.0 4.2398 0.0 0.0 117.0729771044367 68.05144678287343 185.1244238873101 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.3243923658886187 0.7614393726401688 TN{I|L}[DP]{I|L}{I|L}G 4.2398 - 869 + 1 1.139 140107.1 1.0 9117 5561 14674 HBL1_DMSO_200M_050219_1,14680 HBL1_DMSO_200M_050219_1,14680,KILPDLNTV True True KILPDLNTV 72.547666 506.806018054485 72906824.0 14674.0 ENSG00000142207|ENST00000382751|URB1 6.749499479929606 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14681 72.549 61.0 1990200.0 25 0 220470.0 + 2257 AQFHPTEDLVV 11 102 628.3202242708975 1254.6258956085949 2 628.3201171755791 MULTI CID FTMS 0 0 0 14674 2005468.25 0.3242499993330578 -2 0.2532577514648437 7 Unmodified _AQFHPTEDLVV_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 49.52724829834842 0.1202481389936634 3 ED{I|L}VV 5 6 52.875 0.0 0.0 4.2144 0.0 0.0 681.3268910138687 0.0 681.3268910138687 0.0 37.39069071968309 0.0 0.0 0 0.5 0.0 1.2302046884880935 0.0 + ED{I|L}VV 4.2144 + + 1050 1 1.139 96262.1 1.0 9118 5561 14674 HBL1_DMSO_200M_050219_1,14681 HBL1_DMSO_200M_050219_1,14681,AQFHPTEDLVV True True AQFHPTEDLVV 72.549193 628.320117175579 50458172.0 14674.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 8.308831373850504 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14682 72.552 165.0 1450600.0 25 0 125870.0 + 17812 KQLDDLKVEL 10 162 600.8452342256743 1199.6759155181485 2 600.8459350466728 MULTI CID FTMS 0 0 0 14674 1956851.75 0.0058235852859366 15 -0.9741134643554688 8 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 180.73698731380944 1.7447150221655288e-14 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L} 10 4 + 107.81 0.0 0.0 8.9868 8.9868 84.24 0.0 0.0 0.0 1.0155154671948594 39.838956986628375 1.0155154671948594 1.082720884511815 0 1.7856668758921828 1.3010299956639813 1.329689690656103 1.5055233930907204 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}KVE{I|L};[AG]K{I|L}DD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}VKE{I|L};[KQ]{I|L}DD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}VKE{I|L};[AG]K{I|L}DD{I|L}VKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKD{I|L}VKE{I|L};{[QN]|[E{I|L}]|[KN]}NKD{I|L}KVE{I|L} 8.9868;8.8966;8.8421;8.8279;8.7624;8.6769;8.6722;8.6177;8.6036;8.5481 -;-;-;-;-;+;-;-;-;- + 34257 1 1.139 174295.0 1.0 9119 5561 14674 HBL1_DMSO_200M_050219_1,14682 HBL1_DMSO_200M_050219_1,14682,KQLDDLKVEL True True KQLDDLKVEL 72.55244 600.845935046673 21510988160.0 14674.0 ENST00000487431.1_1_9:127620199-127623861:-|nuORF;;ENSG00000136942|ENST00000348462|RPL35;;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;;ENST00000495728.1_1_9:127623696-127624209:-|nuORF;;ENST00000450819.1_1_1:237144684-237145005:+|nuORF 5.988503297170003 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14683 72.556 214.0 962890.0 25 0 130220.0 + 17821 KQLDDLKVEL 10 153 400.8994160702367 1199.67641881091 3 400.8992492556572 MULTI CID FTMS 0 0 0 14674 1408004.625 0.0068128368181911 17 -1.1453933715820312 9 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 114.18643581695662 0.001143558078943 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L} 10 4 + 93.699 0.0 0.0 7.8104 7.8104 90.727 0.0 0.0 0.0 7.27233870643677 17.174617874626037 7.27233870643677 7.27233870643677 0 1.424742501084005 1.6989700043360187 1.5158715643802765 1.2689301784845295 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};[AG]K{I|L}DD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};{[TV]|[{I|L}S]}[VG]QD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};[KQ]{I|L}DD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]D{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};[Q{I|L}]KDD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}{NN|[MP]|[D{I|L}]|[EV]}K{I|L};{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};[K{I|L}]QDD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};[AG]{I|L}KDD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L} 7.8104;7.2042;7.2017;7.1374;7.0465;6.9882;6.862;6.5303;6.4742;6.4438 -;-;-;+;-;-;-;-;-;- + 7171 1 1.139 160947.7 1.0 9120 5561 14674 HBL1_DMSO_200M_050219_1,14683 HBL1_DMSO_200M_050219_1,14683,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14684 72.561 240.0 1348700.0 25 0 110550.0 -1 GLPFAACSPPS 11 207 552.2625452939437 1102.5105376546874 2 552.2632934451103 MULTI CID FTMS 0 0 0 14674 1243561.375 0.6637963849703579 2 -0.1185684204101562 10 Carbamidomethyl (C) _GLPFAAC(Carbamidomethyl (C))SPPS_ ENSG00000088899|ENST00000337576|LZTS3;nc|ENSG00000088899|O60299-2|LZTS3 24.020572477871973 0.5281922720044371 3 {[VA]|[{I|L}G]}PDEN 6 -1 54.5 0.0 0.0 4.9433 0.0 0.0 0.0 474.2072240104669 474.2072240104669 33.06347730353643 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.1307196863200843 0.0 {[VA]|[{I|L}G]}PDEN 4.9433 - 4439 + 1 1.139 253310.9 1.0 9121 5561 14674 HBL1_DMSO_200M_050219_1,14684 HBL1_DMSO_200M_050219_1,14684,GLPFAACSPPS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14685 72.567 352.0 622020.0 25 0 122130.0 -1 0 98 1170.7819175762638 3509.3239233289914 3 1171.450244128704 MULTI CID FTMS 0 0 0 14674 1063995.125 0.2438976035689901 3 -0.2962188720703125 11 3 E 1 -1 6.3515 0.0 0.0 0.18099 0.0 0.0 2991.190160694746 386.067983533704 3377.25814422845 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 E 0.18099 - 128 + 1 1.139 167612.4 1.0 9122 5561 14674 HBL1_DMSO_200M_050219_1,14685 HBL1_DMSO_200M_050219_1,14685, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14686 72.569 70.0 1689900.0 25 0 108030.0 + -1 IYLPAAQTM 9 128 504.27137120896384 1006.5281894847276 2 504.2651244997978 MULTI CID FTMS 0 0 0 14674 1031340.3125 0.4420480957646285 5 -0.44805908203125 12 Carbamidomethyl (C) _LAPHPLC(Carbamidomethyl (C))LS_ ENSG00000198836|ENST00000361510|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313|OPA1;nc|ENSG00000198836|O60313-11|OPA1 23.1484247019978 0.2366544122328345 3 {[MG]|[TS]}V{I|L}RS{I|L}TM 9 -1 + 47.104 0.0 0.0 4.6799 4.6799 83.3 0.0 0.0 0.0 6.478174818886373 14.189819612943973 6.478174818886373 9.208187539523747 0 0.5317183090963749 0.0 0.4674165578762485 0.0 {[MG]|[TS]}V{I|L}RS{I|L}TM;{[MG]|[TS]}V{I|L}[VG]S{I|L}TM;[PA]AQTM{I|L}[Y{I|L}];[Y{I|L}]{I|L}D[HA][Y{I|L}];[Y{I|L}]{I|L}[PA]AQMT;[Y{I|L}]{I|L}[WH][Y{I|L}];{[MG]|[TS]}V{I|L}R[MT]TV;[Y{I|L}][WH]{I|L}[Y{I|L}];{[MG]|[TS]}V{I|L}R[MT]S{I|L};{[MG]|[TS]}V{I|L}R[{M(Oxidation (M))|F}V]W 4.6799;3.765;3.2701;2.8237;2.8171;2.785;2.4976;2.4068;2.3658;2.2251 -;-;-;-;-;-;-;-;-;- 1360 + 1 1.139 89862.6 1.0 9123 5561 14674 HBL1_DMSO_200M_050219_1,14686 HBL1_DMSO_200M_050219_1,14686,LAPHPLCLS False False IYLPAAQTM 72.569024 504.265124499798 18096004.0 14674.0 ENSG00000198836|ENST00000361510|OPA1;;nc|ENSG00000198836|O60313-9|OPA1;;nc|ENSG00000198836|O60313-2|OPA1;;nc|ENSG00000198836|O60313-13|OPA1;;nc|ENSG00000198836|O60313|OPA1;;nc|ENSG00000198836|O60313-11|OPA1 5.798378308614095 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14687 72.574 282.0 1170400.0 25 0 184820.0 -1 GLEPNSARCN 10 163 559.2584665160913 1116.5023800989825 2 559.2587158083916 MULTI CID FTMS 0 0 0 14674 1013010.875 0.4735203640785605 3 -0.2962188720703125 13 Carbamidomethyl (C) _GLEPNSARC(Carbamidomethyl (C))N_ ENSG00000082781|ENST00000296181|ITGB5 29.081581746732265 0.3152867722954398 3 AVPDE{I|L} 6 -1 72.428 0.0 0.0 6.487 0.0 0.0 0.0 489.1678278356166 489.1678278356166 29.705564368681166 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.1549471895720984 0.0 AVPDE{I|L} 6.487 - 2852 + 1 1.139 256449.4 1.0 9124 5561 14674 HBL1_DMSO_200M_050219_1,14687 HBL1_DMSO_200M_050219_1,14687,GLEPNSARCN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14688 72.58 306.0 637520.0 25 0 134310.0 + 42326 VSYLRRLDR 9 141 589.3433381765957 1176.6721234199913 2 589.3433715701103 MULTI CID FTMS 0 0 0 14674 921070.0625 0.4422192761850806 -1 0.1957626342773437 14 Unmodified _VSYLRRLDR_ REV__ENSG00000196557|ENST00000348261|CACNA1H;REV__nc|ENSG00000196557|O95180-2|CACNA1H 1.844237919475145 0.850302753031785 3 {I|L} 1 -1 9.5329 0.0 0.0 0.81016 0.0 0.0 1045.5769371180363 0.0 1045.5769371180363 0.0 0.3842001511636095 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.81016 + + 39 + 1 1.139 150819.1 1.0 9125 5561 14674 HBL1_DMSO_200M_050219_1,14688 HBL1_DMSO_200M_050219_1,14688,VSYLRRLDR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14689 72.586 345.0 1113900.0 25 0 113920.0 + 12102 GQIEELEHL 9 224 534.272474999141 1066.5303970650818 2 534.2728759646416 MULTI CID FTMS 0 0 0 14674 759758.375 1.0 0 0.0 15 Unmodified _GQIEELEHL_ ENSG00000103494|ENST00000647211|RPGRIP1L;nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L 57.72198328787511 0.0273433238377839 3 {[QG]|[NA]}{I|L}EE{I|L}E{I|L}H 9 2 {[QG]|[NA]} + + 57.828 15.713 8.49 5.4221 5.4221 57.13 0.0 0.0 0.0 0.0 17.54001044328674 0.0 0.0 0 0.8494850021680094 0.0 1.5669015600442575 0.0 {[QG]|[NA]}{I|L}EE{I|L}E{I|L}H 5.4221 - 7286 + 1 1.139 286279.0 1.0 9126 5561 14674 HBL1_DMSO_200M_050219_1,14689 HBL1_DMSO_200M_050219_1,14689,GQIEELEHL True True GQIEELEHL 72.58607 534.272875964642 6859527.5 14674.0 nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L;;ENSG00000103494|ENST00000647211|RPGRIP1L 5.7921568552653 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14690 72.59 232.0 1403700.0 25 0 111750.0 + + 23504 LTMPDTPRL 9 212 522.8241559633245 1043.633758993449 2 522.8251830935478 MULTI CID FTMS 0 0 0 14674 628020.6875 0.5842304261927548 -1 0.1957626342773437 16 Unmodified _LTKGAQSVKL_ nc|ENSG00000026751|Q9NQ25-3|SLAMF7;ENSG00000026751|ENST00000368043|SLAMF7;chr1:160750093-160751345|41|14.17|0.69|4.35|+|ENST00000458602|SLAMF7,SLAMF7;chr1:160750132-160750304|41|19.76|0.74|4.74|+|ENST00000621377|SLAMF7,SLAMF7;nc|ENSG00000026751|Q9NQ25-6|SLAMF7;nc|ENSG00000026751|Q9NQ25-7|SLAMF7;ENST00000444090.6_1_1:160718220-160722967:+|nuORF;nc|ENSG00000026751|Q9NQ25-2|SLAMF7 41.95555342248728 0.1369168616057562 3 [{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TVK{I|L} 9 -1 + 58.329 0.0 0.0 5.5891 5.5891 77.415 0.0 0.0 0.0 0.89510432093617 27.98271656286872 0.89510432093617 1.7709222016767256 0 1.1549471895720984 1.0969100130080565 0.9947026752325154 0.0 [{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TVK{I|L};[{M(Oxidation (M))|F}V]PK{I|L}TVK{I|L};[VP]{M(Oxidation (M))|F}K{I|L}TVK{I|L};{[QS]|[NT]}QK{I|L}TVK{I|L};{[TV]|[{I|L}S]}[RD]{I|L}TVK{I|L};{[QG]|[NA]}{[SA]|[TG]}K{I|L}TVK{I|L};{[SA]|[TG]}GQK{I|L}TVK{I|L};[AG]SQK{I|L}TVK{I|L};[VS]{[RE]|[WV]}{I|L}TVK{I|L};[AG]G{[SA]|[TG]}K{I|L}TVK{I|L} 5.5891;5.4194;5.0527;4.3274;4.2818;4.0903;4.0353;3.9803;3.7453;3.6032 -;-;-;-;-;-;-;-;-;- 2740 1 1.139 249539.1 1.0 9127 5561 14674 HBL1_DMSO_200M_050219_1,14690 HBL1_DMSO_200M_050219_1,14690,LTKGAQSVKL False False LTMPDTPRL 72.590436 522.825183093548 581330.0 14674.0 nc|ENSG00000026751|Q9NQ25-3|SLAMF7;;ENSG00000026751|ENST00000368043|SLAMF7;;chr1:160750093-160751345|41|14.17|0.69|4.35|+|ENST00000458602|SLAMF7,SLAMF7;;chr1:160750132-160750304|41|19.76|0.74|4.74|+|ENST00000621377|SLAMF7,SLAMF7;;nc|ENSG00000026751|Q9NQ25-6|SLAMF7;;nc|ENSG00000026751|Q9NQ25-7|SLAMF7;;ENST00000444090.6_1_1:160718220-160722967:+|nuORF;;nc|ENSG00000026751|Q9NQ25-2|SLAMF7 1.7432693640391033 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14691 72.601 580.0 296510.0 25 0 51321.0 -1 0 77 1175.7754873675212 3524.304632702764 3 1176.445849597454 MULTI CID FTMS 0 0 0 14674 523861.96875 0.1890388715266908 3 -0.2962188720703125 17 3 YG 2 -1 10.969 0.0 0.0 0.31124 0.0 0.0 1092.3742361670304 2208.812808706882 3301.187044873913 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.31124 - 59 + 1 1.139 132714.6 1.0 9128 5561 14674 HBL1_DMSO_200M_050219_1,14691 HBL1_DMSO_200M_050219_1,14691, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14692 72.612 591.0 279010.0 25 0 65812.0 -1 0 89 1180.763633080028 3539.2690698402844 3 1181.435351550579 MULTI CID FTMS 0 0 0 14674 511704.125 0.273856098396875 2 -0.1185684204101562 18 3 GY 2 -1 7.9588 0.0 0.0 0.22487 0.0 0.0 1944.6639256576243 1371.5043429010375 3316.168268558662 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GY 0.22487 - 59 + 1 1.139 130172.8 1.0 9129 5561 14674 HBL1_DMSO_200M_050219_1,14692 HBL1_DMSO_200M_050219_1,14692, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14693 72.614 103.0 532550.0 25 0 56824.0 + 41498 VPMRPGILV 9 92 491.2993428273072 980.5841327214144 2 491.2999755740166 MULTI CID FTMS 0 0 0 14674 518310.03125 0.1891175177702443 2 -0.1185684204101562 19 Unmodified _VPMRPGILV_ ENSG00000237651|ENST00000432605|C2orf74 23.1484247019978 0.2366544122328345 3 VPTW 4 7 35.979 0.0 0.0 3.6692 0.0 0.0 0.0 494.3100985162719 494.3100985162719 17.105319037595873 0.0 0.0 0.0 0 0.2614393726401688 1.0457574905606752 0.0 0.0 VPTW 3.6692 - 172 + 1 1.139 47863.8 1.0 9130 5561 14674 HBL1_DMSO_200M_050219_1,14693 HBL1_DMSO_200M_050219_1,14693,VPMRPGILV False False VPMRPGILV 72.614394 491.299975574017 30890578.0 14674.0 ENSG00000237651|ENST00000432605|C2orf74 1.7554606397946677 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14694 72.616 57.0 1105500.0 25 0 238540.0 + 36672 TAYPQVVVV 9 90 488.2792661744117 974.5439794156234 2 488.2789794802666 MULTI CID FTMS 0 0 0 14674 463587.96875 0.0522072809819007 -7 0.6999969482421875 20 Unmodified _TAYPQVVVV_ ENSG00000166532|ENST00000535829|RIMKLB;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;nc|ENSG00000166532|Q9ULI2-2|RIMKLB 29.081581746732265 0.1611639662936252 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T[QP]VVVV 9 2 + 39.388 0.0 0.0 4.0417 4.0417 78.988 0.0 0.0 0.0 6.989700043360188 7.147642715192511 6.989700043360188 6.989700043360188 0 0.5 1.3979400086720375 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T[QP]VVVV;[TA]Y[QP]VVVV;[QP]VY[TA]VVV;VV{[QV]|[N{I|L}]|[RA]|[KV]}S{M(Oxidation (M))|F}VVV;VV{[SA]|[TG]}{[CT]|[{M(Oxidation (M))|F}G]}VVVV;[QP]VV[TA]YVV;[QP]VVY[TA]VV;[TA][{I|L}A]{[CT]|[{M(Oxidation (M))|F}G]}VVVV;VV{[SA]|[TG]}M[TA]VVV;[QP]VYV[TA]VV 4.0417;3.3245;3.1511;2.9161;2.4608;2.2691;2.1696;2.152;2.053;2.0432 -;+;-;-;-;-;-;-;-;- + 400 1 1.139 52960.3 1.0 9131 5561 14674 HBL1_DMSO_200M_050219_1,14694 HBL1_DMSO_200M_050219_1,14694,TAYPQVVVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14696 72.62 9.5 9150300.0 25 0 2482500.0 -1 0 40 1162.797886063532 3485.371828790796 3 1163.464770495892 MULTI CID FTMS 0 0 0 14695 21507170.0 0.1847659079895559 3 -0.2688522338867187 1 3 Y[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}GYW 7 -1 10.934 0.0 0.0 0.31373 0.0 0.0 1310.4838415855208 1132.5066453609838 2442.9904869465045 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}GYW 0.31373 - 28 + 1 1.139 83082.2 1.0 9132 5562 14695 HBL1_DMSO_200M_050219_1,14696 HBL1_DMSO_200M_050219_1,14696, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14697 72.621 11.0 2733200.0 25 0 541270.0 + 18341 KVLEYVIKV 9 55 545.8468629368451 1089.6791729404902 2 545.8472167849541 MULTI CID FTMS 0 0 0 14695 4525730.5 0.2164805617005383 3 -0.2688522338867187 2 Unmodified _KVLEYVIKV_ ENSG00000198681|ENST00000356661|MAGEA1 11.494710602746466 0.5255349189887087 3 {I|L}{I|L}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5 6 16.198 0.0 0.0 1.4865 0.0 0.0 472.3355582938089 0.0 472.3355582938089 0.0 3.750612633916999 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.4865 - 39 + 1 1.139 26563.0 1.0 9133 5562 14695 HBL1_DMSO_200M_050219_1,14697 HBL1_DMSO_200M_050219_1,14697,KVLEYVIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14698 72.622 8.4 2209400.0 25 0 173040.0 + 28941 QAYEALTQI 9 50 518.7698654362866 1035.5251779393732 2 518.7697631716728 MULTI CID FTMS 0 0 0 14695 5428171.0 1.0 0 0.0 3 Unmodified _QAYEALTQI_ ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160 11.640296217721598 0.521594087909532 3 {I|L} 1 8 12.764 0.0 0.0 1.2326 0.0 0.0 904.4300526725748 0.0 904.4300526725748 0.0 7.106625238552508 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2326 + + 16 + 1 1.139 22596.6 1.0 9134 5562 14695 HBL1_DMSO_200M_050219_1,14698 HBL1_DMSO_200M_050219_1,14698,QAYEALTQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14699 72.624 16.0 2703700.0 25 0 361650.0 + -1 SFKILCRLP 9 75 567.3295813073205 1132.644609681441 2 567.3302490115166 MULTI CID FTMS 0 0 0 14695 3017130.75 0.6422662373014492 -7 0.7322158813476562 4 Carbamidomethyl (C) _SFKILC(Carbamidomethyl (C))RLP_ REV__ENSG00000166451|ENST00000305850|CENPN;REV__nc|ENSG00000166451|Q96H22-3|CENPN;REV__nc|ENSG00000166451|Q96H22-4|CENPN;REV__nc|ENSG00000166451|Q96H22-5|CENPN 4.75600775471527 0.7486543447549536 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS][HV]E 7 -1 13.256 0.0 0.0 1.1704 0.0 0.0 0.0 344.2680587383347 344.2680587383347 2.2868817414666154 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS][HV]E 1.1704 - 43 1 1.139 39417.1 1.0 9135 5562 14695 HBL1_DMSO_200M_050219_1,14699 HBL1_DMSO_200M_050219_1,14699,SFKILCRLP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14700 72.625 20.0 1828700.0 25 0 163890.0 + 45101 YPYPYPHTLY 10 64 657.3137392995932 1312.6129256659865 2 657.3140746951103 MULTI CID FTMS 0 0 0 14695 2349001.75 0.8997729693309413 -1 0.0793838500976562 5 Unmodified _YPYPYPHTLY_ ENSG00000116221|ENST00000360840|MRPL37 34.10243960390752 0.2198439752719791 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}CTVN 9 4 60.234 0.0 0.0 4.5889 0.0 0.0 0.0 209.13045679263908 209.13045679263908 49.776341090701415 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.1989700043360187 0.3054621874040891 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}CTVN 4.5889 - 302 + 1 1.139 32228.8 1.0 9136 5562 14695 HBL1_DMSO_200M_050219_1,14700 HBL1_DMSO_200M_050219_1,14700,YPYPYPHTLY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14701 72.626 28.0 2335600.0 25 0 311080.0 + 15443 IPPVAVRL 8 54 432.78695669087136 863.5593604485427 2 432.7869140505791 MULTI CID FTMS 0 0 0 14695 2240462.0 0.8916506671922606 3 -0.2688522338867187 6 Unmodified _IPPVAVRL_ ENSG00000111642|ENST00000544040|CHD4;ENST00000535717.1_1_12:6679844-6680280:-|nuORF;nc|ENSG00000111642|Q14839-2|CHD4 18.13498045792455 0.6430038125133779 3 {I|L}PPV 4 4 56.186 0.0 0.0 6.5063 0.0 0.0 0.0 454.2795504205688 454.2795504205688 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPV 6.5063 + + 23 + 1 1.139 58034.4 1.0 9137 5562 14695 HBL1_DMSO_200M_050219_1,14701 HBL1_DMSO_200M_050219_1,14701,IPPVAVRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14702 72.627 29.0 636530.0 25 0 40506.0 -1 RMKQKKRE 8 49 560.3221297725755 1118.629706611951 2 560.3223144412041 MULTI CID FTMS 0 0 0 14695 1863299.0 0.3542799341559561 -6 0.6108627319335938 7 Oxidation (M) _RM(Oxidation (M))KQKKRE_ ENSG00000105991|ENST00000643460|HOXA1;ENSG00000120094|ENST00000239174|HOXB1;ENSG00000128645|ENST00000331462|HOXD1;nc|ENSG00000105991|P49639|HOXA1 0.6903765706972694 0.8201419426409876 3 S 1 -1 5.4846 0.0 0.0 0.49029 0.0 0.0 644.9304706273791 383.6533297174438 1028.583800344823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.49029 - 2 + 1 1.139 24100.0 1.0 9138 5562 14695 HBL1_DMSO_200M_050219_1,14702 HBL1_DMSO_200M_050219_1,14702,RMKQKKRE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14703 72.628 31.0 1316700.0 25 0 120260.0 15478 IPRYELLV 8 83 501.80307608965927 1001.5915992461186 2 501.8031188845634 MULTI CID FTMS 0 0 0 14695 1537537.25 0.9422693233115076 2 -0.2168350219726562 8 Unmodified _IPRYELLV_ ENSG00000110237|ENST00000263674|ARHGEF17 22.736283301280096 0.5659792798204337 3 {I|L}P[R{I|L}][YE]{I|L}V 8 2 + 48.58 0.0 0.0 4.8503 4.8503 77.938 0.0 0.0 0.0 28.16946789630613 0.4453125937239832 0.4453125937239832 3.679767852945943 0 0.8494850021680094 2.0 0.3252574989159953 0.0 {I|L}P[R{I|L}][YE]{I|L}V;{I|L}P[R{I|L}][YE]V{I|L};[{I|L}P][QP][RV][RH];{I|L}[{I|L}T]{I|L}{M(Oxidation (M))|F}WP{I|L} 4.8503;4.4829;1.8672;1.3101 -;-;-;- 202 + 1 1.139 36526.9 1.0 9139 5562 14695 HBL1_DMSO_200M_050219_1,14703 HBL1_DMSO_200M_050219_1,14703,IPRYELLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14704 72.629 45.0 714730.0 25 0 115750.0 22317 LPSHGVPLI 9 57 466.7819373338645 931.5493217345288 2 466.7819091677666 MULTI CID FTMS 0 0 0 14695 1437148.75 0.0740276696781185 -6 0.6108627319335938 9 Unmodified _LPSHGVPLI_ ENSG00000089053|ENST00000261819|ANAPC5;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5 19.438996006549623 0.310492472477042 3 {I|L} 1 8 15.485 0.0 0.0 1.6622 0.0 0.0 800.4542880204649 0.0 800.4542880204649 0.0 -3.020220652167591 -3.020220652167591 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.6622 + + 30 + 1 1.139 29945.9 1.0 9140 5562 14695 HBL1_DMSO_200M_050219_1,14704 HBL1_DMSO_200M_050219_1,14704,LPSHGVPLI False True DPKHLPLL 72.629463 466.781909167767 212987424.0 14695.0 ENST00000584675.1_1_17:26943244-26943310:+|nuORF 0.2257964213689168 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14705 72.631 24.0 2553400.0 25 0 185610.0 + 14295 IEKMLKPIE 9 88 550.8226870786604 1099.6308212241206 2 550.8229858279228 MULTI CID FTMS 0 0 0 14695 1310326.625 1.0 0 0.0 10 Unmodified _IEKMLKPIE_ REV__ENSG00000116266|ENST00000370008|STXBP3 19.361941925380144 0.3125782356748823 3 {[VA]|[{I|L}G]}{[TV]|[{I|L}S]}{I|L}MK 7 -1 34.23 0.0 0.0 3.1129 0.0 0.0 0.0 354.16610309747915 354.16610309747915 11.495069280990364 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.7302046884880937 0.0 {[VA]|[{I|L}G]}{[TV]|[{I|L}S]}{I|L}MK 3.1129 - 301 1 1.139 50335.4 1.0 9141 5562 14695 HBL1_DMSO_200M_050219_1,14705 HBL1_DMSO_200M_050219_1,14705,IEKMLKPIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14706 72.632 25.0 796850.0 25 0 98447.0 -1 VSLPLPCL 8 43 449.7549792615846 897.4954055899692 2 449.7556640505791 MULTI CID FTMS 0 0 0 14695 1298087.625 0.7927201840843158 -1 0.0793838500976562 11 Carbamidomethyl (C) _VSLPLPC(Carbamidomethyl (C))L_ ENST00000402115.5_1_7:3188672-3198140:-|nuORF 15.768221252438446 0.6779680726941459 3 {I|L} 1 -1 14.604 0.0 0.0 1.6272 0.0 0.0 766.4004023934833 0.0 766.4004023934833 0.0 -8.098943791441968 -8.098943791441968 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.6272 + + 5 + 1 1.139 22526.3 1.0 9142 5562 14695 HBL1_DMSO_200M_050219_1,14706 HBL1_DMSO_200M_050219_1,14706,VSLPLPCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14707 72.633 37.0 420080.0 25 0 42943.0 + 7972 ELVDRPVPLL 10 39 575.8429688153368 1149.6713846974735 2 575.8433105349541 MULTI CID FTMS 0 0 0 14695 1307483.75 0.3640187557600768 -6 0.6108627319335938 12 Unmodified _ELVDRPVPLL_ REV__ENSG00000148337|ENST00000372938|CIZ1;REV__nc|ENSG00000148337|Q9ULV3-2|CIZ1;REV__nc|ENSG00000148337|Q9ULV3-3|CIZ1;REV__nc|ENSG00000148337|Q9ULV3-4|CIZ1;REV__nc|ENSG00000148337|Q9ULV3-5|CIZ1 1.3295316138638542 0.7204866299213272 3 Y 1 -1 2.7642 0.0 0.0 0.24043 0.0 0.0 867.5337331855579 116.05115686588124 983.5848900514392 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.24043 - 3 + 1 1.139 19217.0 1.0 9143 5562 14695 HBL1_DMSO_200M_050219_1,14707 HBL1_DMSO_200M_050219_1,14707,ELVDRPVPLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14708 72.634 23.0 1128700.0 25 0 105560.0 + -1 EVMRFPLF 8 57 527.771544527674 0 527.7715331912041 PEAK CID FTMS 0 0 0 14695 1243233.625 1.0 0 0.0 13 Oxidation (M) _EVM(Oxidation (M))RFPLF_ REV__ENSG00000126251|ENST00000454971|GPR42;REV__ENSG00000185897|ENST00000327809|FFAR3;REV__nc|ENSG00000126251|O15529|GPR42 14.581692164780916 0.4900557725783909 3 {M(Oxidation (M))|F}P 2 -1 9.068 0.0 0.0 0.86073 0.0 0.0 531.2476656160917 275.1401766412719 806.3878422573637 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}P 0.86073 + + 15 + 1 1.139 27092.0 1.0 9144 5562 14695 HBL1_DMSO_200M_050219_1,14708 HBL1_DMSO_200M_050219_1,14708,EVMRFPLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14709 72.636 96.0 191480.0 25 0 14046.0 15250 IPGIRLWPSR 10 48 597.8562718837777 1193.697990834355 2 597.8568603396416 MULTI CID FTMS 0 0 0 14695 996547.6875 1.0 0 0.0 14 Unmodified _IPGIRLWPSR_ ENST00000335997.11_1_X:129200465-129200657:-|nuORF 1.844237919475145 0.7181058121064529 3 {I|L} 1 9 5.4846 0.0 0.0 0.45946 0.0 0.0 813.4542599235972 264.13605676822505 1077.5903166918222 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.45946 + + 6 + 1 1.139 22326.0 1.0 9145 5562 14695 HBL1_DMSO_200M_050219_1,14709 HBL1_DMSO_200M_050219_1,14709,IPGIRLWPSR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14710 72.637 19.0 2408400.0 25 0 254460.0 + 39383 VAIESTPMI 9 76 480.7558951196997 959.4972373061994 2 480.7564269900322 MULTI CID FTMS 0 0 0 14695 764751.75 0.4747838585963735 -1 0.0793838500976562 15 Unmodified _VAIESTPMI_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON 32.116972079565 0.1225432171549407 3 {[TV]|[{I|L}S]}[RP]{M(Oxidation (M))|F}PM{I|L} 8 5 {[TV]|[{I|L}S]}[RP]{M(Oxidation (M))|F} + + 19.253 2.0244 0.33723 2.0065 2.0065 48.851 0.0 0.0 0.0 0.0 5.757659435244737 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {[TV]|[{I|L}S]}[RP]{M(Oxidation (M))|F}PM{I|L} 2.0065 - 153 + 1 1.139 42624.6 1.0 9146 5562 14695 HBL1_DMSO_200M_050219_1,14710 HBL1_DMSO_200M_050219_1,14710,VAIESTPMI True True VAIESTPMI 72.637453 480.756426990032 8723907.0 14695.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-9|SON 1.1890835762023926 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14711 72.639 62.0 511430.0 25 0 28079.0 + 13853 HVIDSIVGDGI 11 68 562.8011959073405 1123.5878388814808 2 562.8015014529228 MULTI CID FTMS 0 0 0 14695 713610.8125 1.0 0 0.0 16 Unmodified _HVIDSIVGDGI_ ENSG00000166801|ENST00000675163|FAM111A 43.85829265575387 0.1529608345840953 3 [HV]{I|L}DS{I|L}V 7 4 48.989 0.0 0.0 4.3601 0.0 0.0 0.0 357.1409754383746 357.1409754383746 36.22490683973748 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.805462187404089 0.0 + [HV]{I|L}DS{I|L}V 4.3601 + + 68 1 1.139 34076.3 1.0 9147 5562 14695 HBL1_DMSO_200M_050219_1,14711 HBL1_DMSO_200M_050219_1,14711,HVIDSIVGDGI False True HVIDSIVGDGI 72.638988 562.801501452923 7404571.5 14695.0 ENSG00000166801|ENST00000675163|FAM111A 5.8916015625 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14712 72.645 312.0 462260.0 25 0 45818.0 + 23748 LTYCTESFSL 10 172 582.2662014400591 1162.5178499469182 2 582.2669555544853 MULTI CID FTMS 0 0 0 14695 712003.75 1.0 0 0.0 17 Unmodified _LTYCTESFSL_ REV__ENSG00000198967|ENST00000641002|OR10Z1;REV__ENSG00000279111|ENST00000623167|OR10X1 24.020572477871973 0.4289996903560794 3 {I|L}TTNT{[QC]|[C(Carbamidomethyl (C))A]}KA 9 -1 51.001 0.0 0.0 4.3871 0.0 0.0 0.0 199.0552919977172 199.0552919977172 17.148415687162952 0.0 0.0 0.0 0 1.6549471895720984 1.154901959985743 0.2614393726401688 0.2742275032520141 {I|L}TTNT{[QC]|[C(Carbamidomethyl (C))A]}KA 4.3871 - 6046 + 1 1.139 108943.5 1.0 9148 5562 14695 HBL1_DMSO_200M_050219_1,14712 HBL1_DMSO_200M_050219_1,14712,LTYCTESFSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14713 72.651 369.0 542820.0 25 0 32401.0 -1 0 94 878.5876331525943 3510.321426743977 4 878.8382446169853 MULTI CID FTMS 0 0 0 14695 483171.125 0.1709880564853449 3 -0.2688522338867187 18 3 VY{I|L}T 4 -1 27.141 0.0 0.0 0.77318 0.0 0.0 2649.86642293714 381.1782930963501 3031.0447160334897 0.0 0.0 0.0 0.0 0 0.0 0.0 1.75 0.0 VY{I|L}T 0.77318 - 316 + 1 1.139 149488.5 1.0 9149 5562 14695 HBL1_DMSO_200M_050219_1,14713 HBL1_DMSO_200M_050219_1,14713, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14714 72.653 74.0 624680.0 25 0 98351.0 23180 LSRLPWAP 8 82 470.2738205521857 938.5330881711716 2 470.2726623415947 MULTI CID FTMS 0 0 0 14695 453897.5 0.5697911727073672 -2 0.275146484375 19 Unmodified _LSRLPWAP_ ENST00000445355.7_1_10:135075987-135076521:-|nuORF 4.75600775471527 0.7954636275367004 3 V 1 8 9.6041 0.0 0.0 1.0233 0.0 0.0 821.4534658340606 0.0 821.4534658340606 0.0 0.9748830160802732 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0233 - 12 + 1 1.139 41542.0 1.0 9150 5562 14695 HBL1_DMSO_200M_050219_1,14714 HBL1_DMSO_200M_050219_1,14714,LSRLPWAP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14715 72.655 79.0 852030.0 25 0 79375.0 + 18339 KVLEYVIKV 9 102 364.23396095998015 1089.6800534801405 3 364.2335388064384 MULTI CID FTMS 0 0 0 14695 450891.125 0.2022271777103499 2 -0.2168350219726562 20 Unmodified _KVLEYVIKV_ ENSG00000198681|ENST00000356661|MAGEA1 29.081581746732265 0.1611639662936252 3 {M(Oxidation (M))|F}V{I|L}VK 5 5 26.639 0.0 0.0 2.4446 0.0 0.0 485.320264517053 0.0 485.320264517053 0.0 14.727442034252965 0.0 0.0 0 0.5 0.0 0.0 0.25 {M(Oxidation (M))|F}V{I|L}VK 2.4446 - 75 + 1 1.139 61672.9 1.0 9151 5562 14695 HBL1_DMSO_200M_050219_1,14715 HBL1_DMSO_200M_050219_1,14715,KVLEYVIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14717 72.665 403.0 536830.0 25 0 30527.0 -1 0 157 857.9294110897305 1713.8442692462609 2 858.4366332888603 MULTI CID FTMS 0 0 0 14716 537895.875 0.4975707510517611 -5 0.4119415283203125 1 3 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADGA[DN]V{M(Oxidation (M))|F}{I|L}Q 16 -1 + 108.1 0.0 0.0 6.3075 6.3075 79.066 0.0 0.0 0.0 23.666701661882897 13.261327031980542 13.261327031980542 1.4144127238045598 0 1.9143943297944483 2.0 0.5941876774005248 1.9049471895720984 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADGA[DN]V{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[DN]V{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWGA[DN]V{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQ[DN]V{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADG{[WN]|[YH]}V{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NADGA[DN]V{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGADGA[DN]V{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWG{[WN]|[YH]}V{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGADQ[DN]V{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NADQ[DN]V{M(Oxidation (M))|F}{I|L}Q 6.3075;6.225;6.1944;6.113;6.0259;5.7815;5.7815;5.7357;5.698;5.698 -;-;-;-;-;-;-;-;-;- 40654 + 1 1.127 143085.6 1.0 9152 5563 14716 HBL1_DMSO_200M_050219_1,14717 HBL1_DMSO_200M_050219_1,14717, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14718 72.667 21.0 2128300.0 25 0 233970.0 + 41558 VPPEILNNV 9 73 497.7822691072368 993.5499852812736 2 497.7823669314384 MULTI CID FTMS 0 0 0 14716 1711594.75 0.1216096740948787 -10 0.9517669677734376 2 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 32.30548876998284 0.1201446275138228 3 [EP]{I|L}PV{I|L}N{[NV]|[RG]} 9 4 + 30.0 0.0 0.0 3.0195 3.0195 69.853 0.0 0.0 0.0 1.7609125905568137 3.6527926935124135 1.7609125905568137 1.7609125905568137 0 0.2887254899964357 0.0 0.0 0.0 [EP]{I|L}PV{I|L}N{[NV]|[RG]};[VP][EP]{I|L}{I|L}N{[NV]|[RG]};[EP]P{I|L}V{I|L}N{[NV]|[RG]};[EP]{I|L}P{I|L}VN{[NV]|[RG]};[EP]PV{I|L}{I|L}N{[NV]|[RG]};[EP]P{I|L}{I|L}VN{[NV]|[RG]};{[HG]|PP}E{I|L}V{I|L}N{[NV]|[RG]};[EP]{I|L}PV{I|L}GG{[NV]|[RG]};[VP][EP]{I|L}{I|L}GG{[NV]|[RG]};[EP]P{I|L}V{I|L}GG{[NV]|[RG]} 3.0195;2.8423;2.7165;2.5393;2.2363;2.2363;2.1486;2.0927;1.9155;1.7897 -;+;-;-;-;-;-;-;-;- + 341 1 1.127 39479.0 1.0 9153 5563 14716 HBL1_DMSO_200M_050219_1,14718 HBL1_DMSO_200M_050219_1,14718,VPPEILNNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14719 72.672 267.0 192830.0 25 0 10593.0 26474 NTLPIPKKGTV 11 103 584.356623307831 1166.698693682462 2 584.3568603396416 MULTI CID FTMS 0 0 0 14716 870401.25 0.2252290309298091 -4 0.371826171875 3 Unmodified _NTLPIPKKGTV_ ENSG00000065618|ENST00000648076|COL17A1;nc|ENSG00000065618|Q9UMD9-2|COL17A1 8.745405648335112 0.8338865417133445 3 {I|L}DQP{I|L} 5 9 15.662 0.0 0.0 1.3424 0.0 0.0 582.375159602187 0.0 582.375159602187 0.0 3.443350238481031 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DQP{I|L} 1.3424 - 229 + 1 1.127 45327.1 1.0 9154 5563 14716 HBL1_DMSO_200M_050219_1,14719 HBL1_DMSO_200M_050219_1,14719,NTLPIPKKGTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14720 72.674 94.0 792310.0 25 0 80647.0 20778 LLVDEALNP 9 111 492.2744977102584 982.5344424873168 2 492.2742492556572 MULTI CID FTMS 0 0 0 14716 654506.625 0.134830612645974 6 -0.5850067138671875 4 Unmodified _LLVDEALNP_ ENSG00000159363|ENST00000326735|ATP13A2;nc|ENSG00000159363|Q9NQ11-2|ATP13A2;nc|ENSG00000159363|Q9NQ11-3|ATP13A2 12.531546534597751 0.4974689918368763 3 [DP]VVNE 6 7 23.656 0.0 0.0 2.4077 0.0 0.0 0.0 326.2092831457731 326.2092831457731 9.05198077559512 0.0 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.6989700043360187 [DP]VVNE 2.4077 - 307 1 1.127 63601.9 1.0 9155 5563 14716 HBL1_DMSO_200M_050219_1,14720 HBL1_DMSO_200M_050219_1,14720,LLVDEALNP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14721 72.676 132.0 317200.0 25 0 41455.0 40123 VGLGRAVEVRR 11 82 606.369916658782 1210.725280384364 2 606.3701049685478 MULTI CID FTMS 0 0 0 14716 594554.4375 1.0 0 0.0 5 Unmodified _VGLGRAVEVRR_ ENST00000497918.5_1_2:220029863-220033027:-|nuORF 1.4819007175156935 0.86815623132643 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 1.127 34184.3 1.0 9156 5563 14716 HBL1_DMSO_200M_050219_1,14721 HBL1_DMSO_200M_050219_1,14721,VGLGRAVEVRR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14722 72.684 427.0 692480.0 25 0 127470.0 + 9605 FLLDKKIGV 9 199 344.88628408818136 1031.637022864744 3 344.8864013552666 MULTI CID FTMS 0 0 0 14716 536943.4375 1.0 0 0.0 6 Unmodified _FLLDKKIGV_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 61.357469665136826 0.0253304979873734 3 {M(Oxidation (M))|F}{I|L}{I|L}DK[K{I|L}]GV 9 0 + 61.436 0.0 0.0 5.9552 5.9552 84.352 0.0 0.0 0.0 25.186078458385936 5.641588145145491 5.641588145145491 6.064921830680703 0 0.3494850021680094 0.0 0.6989700043360187 0.6549471895720984 + + {M(Oxidation (M))|F}{I|L}{I|L}DK[K{I|L}]GV;{M(Oxidation (M))|F}{I|L}VEK[K{I|L}]GV;{M(Oxidation (M))|F}{I|L}{I|L}DK[K{I|L}]VG;{M(Oxidation (M))|F}V{I|L}EK[K{I|L}]GV;V{M(Oxidation (M))|F}{I|L}EK[K{I|L}]GV;{M(Oxidation (M))|F}{I|L}VEK[K{I|L}]VG;{M(Oxidation (M))|F}{I|L}{I|L}V[SG][K{I|L}]GV;{M(Oxidation (M))|F}V{I|L}EK[K{I|L}]VG;{M(Oxidation (M))|F}{I|L}{I|L}V[KS]VQV;{M(Oxidation (M))|F}{I|L}{I|L}DV{I|L}{I|L}TV 5.9552;5.3673;5.0651;4.7944;4.5026;4.4772;4.2106;3.9042;3.8986;3.8054 +;-;-;-;-;-;-;-;-;- + 816 + 1 1.127 237123.7 1.0 9157 5563 14716 HBL1_DMSO_200M_050219_1,14722 HBL1_DMSO_200M_050219_1,14722,FLLDKKIGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14723 72.692 486.0 338450.0 25 0 32004.0 + 12479 GVAPGFQVV 9 171 437.2450498005917 872.4755466679835 2 437.2450134158134 MULTI CID FTMS 0 0 0 14716 418614.21875 1.0 0 0.0 7 Unmodified _GVAPGFQVV_ ENSG00000165724|ENST00000298585|ZMYND19 49.66892048692302 0.0410958345688192 3 [VG]AVCVAGVV 10 5 + 47.858 0.0 0.0 5.4854 5.4854 74.878 0.0 0.0 0.0 13.374592612906554 5.764837301042718 5.764837301042718 0.5115252244738144 0 0.8807196863200843 1.6989700043360187 0.0 0.0 [VG]AVCVAGVV;[VG]AVCVQVV;[VG]AVCAVGVV;[VG]WSVAGVV;[VG]WSVQVV;[VG]AVWSGVV;[VG]WSAVGVV;{[QV]|[N{I|L}]|[RA]|[KV]}VCVAGVV;{[QV]|[N{I|L}]|[RA]|[KV]}VCVQVV;[VG]A[PG]{M(Oxidation (M))|F}AGVV 5.4854;5.4267;4.9385;4.9123;4.8598;4.3916;4.3654;3.9524;3.9;3.8831 -;-;-;-;-;-;-;-;-;- 1231 1 1.127 129380.2 1.0 9158 5563 14716 HBL1_DMSO_200M_050219_1,14723 HBL1_DMSO_200M_050219_1,14723,GVAPGFQVV True True GVAPGFQVV 72.692498 437.245013415813 1785643.25 14716.0 ENSG00000165724|ENST00000298585|ZMYND19 5.929839134216309 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14724 72.7 408.0 172120.0 25 0 11349.0 21409 LPGLRRRAPIS 11 138 618.3884167469242 0 618.3883544802666 PEAK CID FTMS 0 0 0 14716 379976.75 1.0 0 0.0 8 Unmodified _LPGLRRRAPIS_ ENST00000368219.1_1_1:156698226-156698472:-|nuORF 6.2057823575117 0.47618401536486 3 TQ 2 11 10.886 0.0 0.0 0.88159 0.0 0.0 766.5300855917015 236.1042116754516 1002.6342972671532 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TQ 0.88159 - 99 + 1 1.127 57719.9 1.0 9159 5563 14716 HBL1_DMSO_200M_050219_1,14724 HBL1_DMSO_200M_050219_1,14724,LPGLRRRAPIS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14725 72.708 441.0 286620.0 25 0 12514.0 -1 HGNYQNCPVV 10 171 594.2644055430457 1186.5142581528912 2 594.2676879763603 MULTI CID FTMS 0 0 0 14716 313569.25 0.5069650363330594 4 -0.4634017944335937 9 Carbamidomethyl (C) _HGNYQNC(Carbamidomethyl (C))PVV_ ENSG00000138835|ENST00000695401|RGS3;nc|ENSG00000138835|P49796-4|RGS3;nc|ENSG00000138835|P49796-5|RGS3;nc|ENSG00000138835|P49796-6|RGS3;nc|ENSG00000138835|P49796-9|RGS3;nc|ENSG00000138835|P49796|RGS3 10.823927491677226 0.6659270209832991 3 ESV{I|L}{I|L} 5 -1 25.049 0.0 0.0 2.1112 0.0 0.0 114.97575825230372 527.2051485650999 642.1809068174036 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 ESV{I|L}{I|L} 2.1112 - 1129 + 1 1.127 98953.7 1.0 9160 5563 14716 HBL1_DMSO_200M_050219_1,14725 HBL1_DMSO_200M_050219_1,14725,HGNYQNCPVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14726 72.717 535.0 422920.0 25 0 59217.0 41871 VPYPTASLV 9 198 473.7660322814071 945.5175116296142 2 473.7659179568291 MULTI CID FTMS 0 0 0 14716 318105.25 0.509490168881952 -5 0.4119415283203125 10 Unmodified _VPYPTASLV_ ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-3|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1 56.541270873467816 0.0279970378729908 3 {[TV]|[{I|L}S]}S{[QG]|[NA]}GVS{I|L}V 10 6 + 38.189 0.0 0.0 4.0389 4.0389 71.211 0.0 0.0 0.0 4.3300057898632005 7.236607226101558 4.3300057898632005 1.1535656654828657 0 0.9604093769761876 1.3979400086720375 1.798455006504028 0.0 {[TV]|[{I|L}S]}S{[QG]|[NA]}GVS{I|L}V;{[TV]|[{I|L}S]}S{[QG]|[NA]}GSV{I|L}V;{[TV]|[{I|L}S]}S[RN]AS{I|L}V;[TP]AS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}V;{[TV]|[{I|L}S]}S{[QG]|[NA]}RS{I|L}V;[TP]A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VS{I|L}V;[VP]Y{I|L}QD{I|L}V;[VP]Y[TP]AS{I|L}V;{[TV]|[{I|L}S]}VQV{I|L}S[NS];[TP]A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SV{I|L}V 4.0389;3.9169;3.645;3.581;3.5087;3.3319;3.3235;3.2949;3.2736;3.2099 -;-;-;-;-;-;-;+;-;- + 3053 1 1.127 172900.9 1.0 9161 5563 14716 HBL1_DMSO_200M_050219_1,14726 HBL1_DMSO_200M_050219_1,14726,VPYPTASLV True True KVAEVLSSL 72.717034 473.765917956829 1557573.0 14716.0 nc|ENSG00000118246|Q9NYY8-2|FASTKD2;;ENST00000471788.1_1_2:207651391-207655428:+|nuORF;;ENSG00000118246|ENST00000402774|FASTKD2;;ENST00000487777.5_1_2:207631381-207653673:+|nuORF 2.5592576265335083 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14727 72.728 581.0 430600.0 25 0 45215.0 + 13649 HPVILASI 8 207 425.2636551062736 848.5127572793473 2 425.2642394900322 MULTI CID FTMS 0 0 0 14716 329842.03125 0.8136364326631982 -2 0.1185684204101562 11 Unmodified _HPVILASI_ ENSG00000175390|ENST00000651655|EIF3F;ENST00000528653.1_1_11:8009127-8013479:+|nuORF 56.04830969593885 0.114297258605095 3 T{M(Oxidation (M))|F}{I|L}{I|L}AS{I|L} 7 3 62.313 0.0 0.0 7.3438 0.0 0.0 85.08982283759921 0.0 85.08982283759921 0.0 38.72385904199649 0.0 0.0 0 0.5 0.0 2.2856668758921828 0.0 T{M(Oxidation (M))|F}{I|L}{I|L}AS{I|L} 7.3438 - 731 1 1.127 191259.7 1.0 9162 5563 14716 HBL1_DMSO_200M_050219_1,14727 HBL1_DMSO_200M_050219_1,14727,HPVILASI True True HPVILASI 72.728369 425.264239490032 7926181.5 14716.0 ENST00000528653.1_1_11:8009127-8013479:+|nuORF;;ENSG00000175390|ENST00000651655|EIF3F 3.76770011583964 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14728 72.739 586.0 392340.0 25 0 27051.0 + 34267 SLQLRPSVPL 10 234 555.3354741282635 1108.656395323327 2 555.3359863162041 MULTI CID FTMS 0 0 0 14716 298417.6875 0.3055839363923366 6 -0.5850067138671875 12 Unmodified _SLQLRPSVPL_ REV__ENSG00000079385|ENST00000161559|CEACAM1;REV__ENSG00000086548|ENST00000199764|CEACAM6;REV__ENSG00000105388|ENST00000221992|CEACAM5;REV__ENSG00000105388|ENST00000221992|CEACAM5;REV__ENSG00000105388|ENST00000221992|CEACAM5;REV__ENSG00000124469|ENST00000244336|CEACAM8;REV__ENST00000344391.9_1_19:43023158-43032553:-|nuORF;REV__ENST00000377806.7_1_19:43023094-43032607:-|nuORF;REV__ENST00000403136.1_1_19:43025413-43032607:-|nuORF;REV__nc|ENSG00000079385|P13688-10|CEACAM1;REV__nc|ENSG00000079385|P13688-11|CEACAM1;REV__nc|ENSG00000079385|P13688-2|CEACAM1;REV__nc|ENSG00000079385|P13688-3|CEACAM1;REV__nc|ENSG00000079385|P13688-4|CEACAM1;REV__nc|ENSG00000079385|P13688-5|CEACAM1;REV__nc|ENSG00000079385|P13688-6|CEACAM1;REV__nc|ENSG00000079385|P13688-8|CEACAM1;REV__nc|ENSG00000079385|P13688-9|CEACAM1;REV__nc|ENSG00000105388|P06731-2|CEACAM5;REV__nc|ENSG00000105388|P06731-2|CEACAM5;REV__nc|ENSG00000105388|P06731-2|CEACAM5 10.823927491677226 0.6659270209832991 3 [YT]K{[NV]|[RG]}E{I|L} 7 -1 21.003 0.0 0.0 1.8945 0.0 0.0 0.0 258.1851178177207 258.1851178177207 8.42818509506671 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3054621874040891 0.0 [YT]K{[NV]|[RG]}E{I|L} 1.8945 - 2572 1 1.127 176225.6 1.0 9163 5563 14716 HBL1_DMSO_200M_050219_1,14728 HBL1_DMSO_200M_050219_1,14728,SLQLRPSVPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14729 72.743 252.0 398450.0 25 0 32959.0 + 45632 YVLVTRGPL 9 128 509.3103094160552 0 509.3110229372978 PEAK CID FTMS 0 0 0 14716 319839.6875 1.0 0 0.0 13 Unmodified _YVLVTRGPL_ REV__ENSG00000129566|ENST00000262715|TEP1;REV__nc|ENSG00000129566|Q99973-2|TEP1 19.256988751693697 0.2078072434435185 3 {I|L} 1 -1 10.485 0.0 0.0 1.0313 0.0 0.0 262.1345680654902 638.363918026035 900.4984860915251 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 1.0313 + + 103 + 1 1.127 83614.8 1.0 9164 5563 14716 HBL1_DMSO_200M_050219_1,14729 HBL1_DMSO_200M_050219_1,14729,YVLVTRGPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14730 72.757 773.0 500180.0 25 0 46197.0 + + 13456 ALLHADFRV 9 275 347.86779185504184 1040.5815461653256 3 348.2011291384697 MULTI CID FTMS 0 0 0 14716 275016.125 1.0 0 0.0 14 Unmodified _HLRTMIATV_ ENSG00000104907|ENST00000357720|TRMT1;ENST00000585435.5_1_19:13218480-13220441:-|nuORF;nc|ENSG00000104907|Q9NXH9-2|TRMT1;ENST00000593157.5_1_19:13216299-13227549:-|nuORF 12.531546534597751 0.4974689918368763 3 [{I|L}A]{I|L}HADVA 8 -1 32.573 0.0 0.0 3.1303 0.0 0.0 0.0 247.12025089682305 247.12025089682305 15.578430140962777 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}A]{I|L}HADVA 3.1303 - 1094 + 1 1.127 335789.2 1.0 9165 5563 14716 HBL1_DMSO_200M_050219_1,14730 HBL1_DMSO_200M_050219_1,14730,HLRTMIATV False False ALLHADFRV 72.756681 348.20112913847 2945289.75 14716.0 ENSG00000104907|ENST00000357720|TRMT1;;ENST00000585435.5_1_19:13218480-13220441:-|nuORF;;nc|ENSG00000104907|Q9NXH9-2|TRMT1;;ENST00000593157.5_1_19:13216299-13227549:-|nuORF 5.118004480997722 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14731 72.771 777.0 288020.0 25 0 14055.0 19723 LGPEMMAVQQ 10 258 368.5117006638418 1102.5132725917254 3 368.5112487673759 MULTI CID FTMS 0 0 0 14716 262781.75 0.4748043080461701 4 -0.4634017944335937 15 Unmodified _LGPEMMAVQQ_ ENST00000266458.9_1_12:10374753-10374867:+|nuORF 18.1463463914782 0.5430639438673815 3 {[VA]|[{I|L}G]}PED{I|L} 6 6 53.619 0.0 0.0 4.8634 0.0 0.0 0.0 475.1797655793003 475.1797655793003 38.1437180047066 0.0 0.0 0.0 0 0.3252574989159953 2.0 1.274227503252014 0.0 {[VA]|[{I|L}G]}PED{I|L} 4.8634 - 752 + 1 1.127 183677.3 1.0 9166 5563 14716 HBL1_DMSO_200M_050219_1,14731 HBL1_DMSO_200M_050219_1,14731,LGPEMMAVQQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14732 72.783 686.0 195110.0 25 0 28550.0 23965 LVSGIPATQ 9 84 885.5053694194888 884.4980929528888 1 886.5808593630791 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _LVSGIPATQ_ ENSG00000196878|ENST00000356082|LAMB3 29.081581746732265 0.1611639662936252 3 RA{I|L}MGG 6 8 31.815 0.0 0.0 3.597 0.0 0.0 0.0 296.1614290099851 296.1614290099851 22.900990676322905 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 RA{I|L}MGG 3.597 - 273 + 1 1.127 102469.7 1.0 9167 5563 14716 HBL1_DMSO_200M_050219_1,14732 HBL1_DMSO_200M_050219_1,14732,LVSGIPATQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14733 72.795 694.0 106490.0 25 0 6662.0 -1 0 94 882.4913921479412 0 882.3346435427666 PEAK CID FTMS 0 0 0 -1 0 17 3 YTTG 4 -1 7.6123 0.0 0.0 0.43179 0.0 0.0 999.5664502120948 338.20783411197505 1337.77428432407 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 YTTG 0.43179 - 215 + 1 1.127 61474.6 1.0 9168 5563 14716 HBL1_DMSO_200M_050219_1,14733 HBL1_DMSO_200M_050219_1,14733, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14734 72.81 800.0 333020.0 25 0 15158.0 + 7805 ELIKDFQKQDI 11 234 459.58540135974096 1375.734374679423 3 459.5855285525322 MULTI CID FTMS 0 0 0 14716 207092.578125 0.09110970099021 4 -0.4634017944335937 18 Unmodified _ELIKDFQKQDI_ REV__ENSG00000184254|ENST00000329841|ALDH1A3 19.361941925380144 0.6323962752489956 3 {[QN]|[E{I|L}]|[KN]}[PG]PPP[PG]Q{M(Oxidation (M))|F}Q{I|L} 13 -1 {[QN]|[E{I|L}]|[KN]}[PG]PPP[PG]Q{M(Oxidation (M))|F}Q + + 15.485 10.601 0.85172 1.1255 1.1255 48.391 0.0 0.0 0.0 0.0 -6.911225100727592 -6.911225100727592 0.0 0 0.0 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[PG]PPP[PG]Q{M(Oxidation (M))|F}Q{I|L} 1.1255 - 8866 + 1 1.127 208291.1 0.9100000262260436 9169 5563 14716 HBL1_DMSO_200M_050219_1,14734 HBL1_DMSO_200M_050219_1,14734,ELIKDFQKQDI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14735 72.822 661.0 135620.0 25 0 10100.0 -1 0 92 984.9456712369666 1967.8767895407327 2 985.4479247927666 MULTI CID FTMS 0 0 0 14716 187630.296875 0.4719589690267198 1 -0.1776504516601562 19 3 [YQ]K{I|L}AT 6 -1 23.887 0.0 0.0 1.2139 0.0 0.0 0.0 1260.4627630116895 1260.4627630116895 7.91833743429045 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 [YQ]K{I|L}AT 1.2139 - 2956 1 1.127 62893.3 1.0 9170 5563 14716 HBL1_DMSO_200M_050219_1,14735 HBL1_DMSO_200M_050219_1,14735, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14736 72.833 618.0 144610.0 25 0 7294.5 7622 EISVHWEHVLE 11 136 689.3445507195758 0 688.8768188357353 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _EISVHWEHVLE_ ENSG00000018236|ENST00000551295|CNTN1;nc|ENSG00000018236|Q12860-2|CNTN1 32.78568957990786 0.2003122968207734 3 Q{I|L}[DN]MD{I|L}DD 9 10 42.449 0.0 0.0 3.0834 0.0 0.0 218.1329631042761 96.08242975406483 314.215392858341 0.0 0.0 0.0 0.0 0 0.0 0.0 1.055462187404089 0.0 Q{I|L}[DN]MD{I|L}DD 3.0834 - 4433 + 1 1.127 70815.1 1.0 9171 5563 14716 HBL1_DMSO_200M_050219_1,14736 HBL1_DMSO_200M_050219_1,14736,EISVHWEHVLE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14738 72.837 1.1 30299000.0 25 0 4115900.0 + 22129 LPPQPKVK 8 51 453.7921119878436 905.5696710424872 2 453.7926208376884 MULTI CID FTMS 0 0 0 14737 33166256.0 0.5178338567735631 -4 0.4919815063476562 1 Unmodified _LPPQPKVK_ REV__ENSG00000204463|ENST00000676615|BAG6;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6 13.50788311687929 0.7113601687236069 3 {I|L}PP 3 -1 50.445 0.0 0.0 5.5706 0.0 0.0 0.0 595.3579294510363 595.3579294510363 43.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PP 5.5706 + + 10 + 1 1.127 36795.6 1.0 9172 5564 14737 HBL1_DMSO_200M_050219_1,14738 HBL1_DMSO_200M_050219_1,14738,LPPQPKVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14739 72.838 3.3 14373000.0 25 0 2253200.0 + 3096 AVPDEIPPLE 10 62 540.2848465386849 1078.5551401441696 2 540.2852661013603 MULTI CID FTMS 0 0 0 14737 8843258.0 0.2200690005560418 5 -0.4073562622070312 2 Unmodified _AVPDEIPPLE_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 24.881564428377168 0.4096545554397951 3 [DP]E{I|L}AVPP{I|L}E 10 4 [DP]E{I|L}AV + + 36.305 22.937 3.674 3.3661 3.3661 50.956 0.0 0.0 0.0 0.0 -2.411152065976069 -2.411152065976069 0.0 0 0.4247425010840047 0.0 0.6139829889124311 0.0 [DP]E{I|L}AVPP{I|L}E 3.3661 - 158 + 1 1.127 47166.2 1.0 9173 5564 14737 HBL1_DMSO_200M_050219_1,14739 HBL1_DMSO_200M_050219_1,14739,AVPDEIPPLE False True AVPDEIPPLE 72.837953 540.28526610136 2032492416.0 14737.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 5.781211853027344 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14740 72.839 11.0 3588500.0 25 0 604620.0 13150 HFLEKLTIS 9 58 544.3086855628304 1086.6028181924607 2 544.3090698122978 MULTI CID FTMS 0 0 0 14737 4167284.25 0.8238505059455234 -4 0.4919815063476562 3 Unmodified _HFLEKLTIS_ ENSG00000144406|ENST00000673920|UNC80;ENST00000489023.5_1_2:210693994-210832362:+|nuORF;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80 1.844237919475145 0.850302753031785 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.127 37616.8 1.0 9174 5564 14737 HBL1_DMSO_200M_050219_1,14740 HBL1_DMSO_200M_050219_1,14740,HFLEKLTIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14741 72.84 15.0 1687700.0 25 0 137860.0 + 9606 FLLDKKIGV 9 49 516.8260458791663 1031.6375388251324 2 516.8264037966728 MULTI CID FTMS 0 0 0 14737 2415308.75 1.0 0 0.0 4 Unmodified _FLLDKKIGV_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 19.256988751693697 0.3154191944385105 3 KD{I|L}{[QN]|[E{I|L}]|[KN]} 5 7 24.961 0.0 0.0 2.4195 0.0 0.0 415.2799244611344 0.0 415.2799244611344 0.0 17.971062485323515 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 KD{I|L}{[QN]|[E{I|L}]|[KN]} 2.4195 - 22 1 1.127 24227.0 1.0 9175 5564 14737 HBL1_DMSO_200M_050219_1,14741 HBL1_DMSO_200M_050219_1,14741,FLLDKKIGV False True FLLDKKIGV 72.840312 516.826403796673 52803852.0 14737.0 nc|ENSG00000166226|P78371-2|CCT2;;ENSG00000166226|ENST00000299300|CCT2 5.172090371449788 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14742 72.841 16.0 2369600.0 25 0 145700.0 + 16937 KILPDLNTV 9 74 506.80590437340896 0 506.8061096072197 PEAK CID FTMS 0 0 0 14737 2281582.25 0.5075007982589669 2 -0.1518402099609375 5 Unmodified _KILPDLNTV_ ENSG00000142207|ENST00000382751|URB1 32.78568957990786 0.0971838787772021 3 T 1 8 9.8464 0.0 0.0 0.97335 0.0 0.0 793.4700413134211 114.05665002994374 907.5266913433647 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 + T 0.97335 + + 73 + 1 1.127 35132.0 1.0 9176 5564 14737 HBL1_DMSO_200M_050219_1,14742 HBL1_DMSO_200M_050219_1,14742,KILPDLNTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14743 72.843 25.0 1274100.0 25 0 127320.0 + 17813 KQLDDLKVEL 10 69 600.8452342256743 1199.6759155181485 2 600.8458129763603 MULTI CID FTMS 0 0 0 14737 1351811.125 0.004022986093308 18 -1.2045440673828125 6 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 39.21299971606389 0.1658776112144286 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K 7 7 44.702 0.0 0.0 3.7262 0.0 0.0 0.0 356.181627758636 356.181627758636 28.5045666179861 0.0 0.0 0.0 0 1.1549471895720984 1.2218487496163564 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K 3.7262 - 172 1 1.127 27205.9 1.0 9177 5564 14737 HBL1_DMSO_200M_050219_1,14743 HBL1_DMSO_200M_050219_1,14743,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14744 72.844 32.0 1152000.0 25 0 264600.0 + 18407 KVVEDGILKL 10 47 557.3474769809325 1112.6804010286648 2 557.3475219607353 MULTI CID FTMS 0 0 0 14737 1235979.5 0.5004057767056033 -4 0.4919815063476562 7 Unmodified _KVVEDGILKL_ ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1 34.221707139014875 0.2185845369562963 3 KVVE{[RE]|[WV]}{I|L} 7 5 38.926 0.0 0.0 3.4984 0.0 0.0 0.0 256.16681848697505 256.16681848697505 31.47894779085682 0.0 0.0 0.0 0 1.992992819099939 0.0 0.0 0.0 KVVE{[RE]|[WV]}{I|L} 3.4984 - 29 + 1 1.127 34609.1 1.0 9178 5564 14737 HBL1_DMSO_200M_050219_1,14744 HBL1_DMSO_200M_050219_1,14744,KVVEDGILKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14745 72.845 27.0 3537100.0 25 0 338950.0 + + 21576 SEIPKLPAV 9 99 477.3108331829908 952.6071134327816 2 477.3109008669853 MULTI CID FTMS 0 0 0 14737 998710.75 0.1531575973486093 -4 0.4919815063476562 8 Unmodified _LPKLRDLV_ ENST00000598044.1_1_19:50861812-50862477:-|nuORF;ENSG00000131400|ENST00000253719|NAPSA;chr19:50334405-50334743|22|113.32|0.16|9.51|-|0|NAPSB,None|1;chr19:50334405-50334506|12|128.75|0.04|11.74|-|0|NAPSB,None|1 32.30548876998284 0.3644845974844379 3 {I|L}P{I|L}A 4 -1 50.918 0.0 0.0 5.3451 0.0 0.0 0.0 555.3280733697874 555.3280733697874 34.255828144472034 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}P{I|L}A 5.3451 - 357 + 1 1.127 77814.9 1.0 9179 5564 14737 HBL1_DMSO_200M_050219_1,14745 HBL1_DMSO_200M_050219_1,14745,LPKLRDLV False False SEIPKLPAV 72.845026 477.310900866985 24020098.0 14737.0 ENST00000598044.1_1_19:50861812-50862477:-|nuORF;;ENSG00000131400|ENST00000253719|NAPSA;;chr19:50334405-50334743|22|113.32|0.16|9.51|-|0|NAPSB,None|1;;chr19:50334405-50334506|12|128.75|0.04|11.74|-|0|NAPSB,None|1 4.115246136983235 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14746 72.846 17.0 1850100.0 25 0 189670.0 + 6355 DVREIVNNI 9 59 536.2944518786005 0 536.2933837771416 PEAK CID FTMS 0 0 0 14737 984528.0 0.1131281189782103 -3 0.2962188720703125 9 Unmodified _DVREIVNNI_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 24.99096001346401 0.1558265925128033 3 DNV{I|L} 4 6 24.553 0.0 0.0 2.2934 0.0 0.0 130.11342660700717 496.21747766666255 626.3309042736697 0.0 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.0 DNV{I|L} 2.2934 - 37 + 1 1.127 30343.8 1.0 9180 5564 14737 HBL1_DMSO_200M_050219_1,14746 HBL1_DMSO_200M_050219_1,14746,DVREIVNNI False True DVREIVNNI 72.846205 536.293383777142 136581792.0 14737.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 3.6543798446655273 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14747 72.847 24.0 1095300.0 25 0 135940.0 + 17822 KQLDDLKVEL 10 60 400.8994160702367 1199.67641881091 3 400.8992492556572 MULTI CID FTMS 0 0 0 14737 982357.6875 0.0047532817031997 20 -1.3959808349609375 10 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 22.774965066869 0.4569865297271528 3 [KQ]{I|L}DD{I|L} 6 4 13.161 0.0 0.0 1.097 0.0 0.0 0.0 484.2796699765559 484.2796699765559 0.0616686753686241 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.6237125054200234 + [KQ]{I|L}DD{I|L} 1.097 + + 21 1 1.127 26477.5 1.0 9181 5564 14737 HBL1_DMSO_200M_050219_1,14747 HBL1_DMSO_200M_050219_1,14747,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14748 72.849 21.0 1399500.0 25 0 113180.0 + 10673 FVRRQRDK 8 71 552.8224288558471 1103.630304778494 2 552.8229858279228 MULTI CID FTMS 0 0 0 14737 823176.75 0.3130043342552557 -4 0.4919815063476562 11 Unmodified _FVRRQRDK_ REV__ENSG00000142621|ENST00000688493|FHAD1 2.889219685676258 0.8067950007271085 3 Y 1 -1 12.474 0.0 0.0 1.1303 0.0 0.0 922.5562824169692 0.0 922.5562824169692 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1303 - 7 + 1 1.127 29681.7 1.0 9182 5564 14737 HBL1_DMSO_200M_050219_1,14748 HBL1_DMSO_200M_050219_1,14748,FVRRQRDK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14749 72.854 315.0 320210.0 25 0 79739.0 -1 0 46 1170.7819175762638 3509.3239233289914 3 1172.793627917767 MULTI CID FTMS 0 0 0 14737 776235.9375 0.5792811447847568 5 -0.4073562622070312 12 3 G 1 -1 6.9897 0.0 0.0 0.19918 0.0 0.0 1967.635276944029 1481.6427248708756 3449.278001814905 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19918 - 7 + 1 1.127 88530.8 1.0 9183 5564 14737 HBL1_DMSO_200M_050219_1,14749 HBL1_DMSO_200M_050219_1,14749, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14750 72.856 26.0 1186200.0 25 0 119430.0 + 9974 FPHFYLAI 8 64 504.27137120896384 1006.5281894847276 2 504.2641479372978 MULTI CID FTMS 0 0 0 14737 577354.9375 0.2474630804293138 8 -0.5932693481445312 13 Unmodified _FPHFYLAI_ REV__ENSG00000078589|ENST00000171757|P2RY10 11.114462752807354 0.7467182956244686 3 M 1 -1 15.485 0.0 0.0 1.5384 0.0 0.0 857.4770095304293 0.0 857.4770095304293 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.5384 - 34 + 1 1.127 27920.2 1.0 9184 5564 14737 HBL1_DMSO_200M_050219_1,14750 HBL1_DMSO_200M_050219_1,14750,FPHFYLAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14751 72.857 30.0 1332300.0 25 0 91746.0 + 24737 MPELGLRSV 9 79 501.2755965705202 1000.5366402078404 2 501.2748290896416 MULTI CID FTMS 0 0 0 14737 504902.25 0.9227032718790686 -1 0.1776504516601562 14 Unmodified _MPELGLRSV_ ENSG00000012211|ENST00000599218|PRICKLE3;nc|ENSG00000012211|O43900-2|PRICKLE3 21.53697664764585 0.2571576504437394 3 MPE{I|L} 4 5 43.686 0.0 0.0 4.3662 0.0 0.0 0.0 527.2944945543165 527.2944945543165 22.71652514092061 0.0 0.0 0.0 0 0.75 0.0 0.4247425010840047 0.0 + MPE{I|L} 4.3662 + + 34 + 1 1.127 34236.0 1.0 9185 5564 14737 HBL1_DMSO_200M_050219_1,14751 HBL1_DMSO_200M_050219_1,14751,MPELGLRSV False True MPELGLRSV 72.856697 501.274829089642 7464083.0 14737.0 nc|ENSG00000012211|O43900-2|PRICKLE3;;ENSG00000012211|ENST00000599218|PRICKLE3 7.222947915395101 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14752 72.858 43.0 782860.0 25 0 63701.0 + + 36399 KIVDFSYSV 9 74 528.2799578265451 1054.54536271989 2 529.2812988162041 MULTI CID FTMS 0 0 0 14737 451053.875 0.1790052070998637 -4 0.4919815063476562 15 Unmodified _SYRLLMSVS_ nc|ENSG00000156970|O60566-3|BUB1B;ENST00000453867.6_3_15:40509736-40545453:+|nuORF;ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B 7.910154910731844 0.6385446671287552 3 {[DS]|[MA]|[CV]|TT}Y[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SV 9 -1 + 22.214 0.0 0.0 2.1065 2.1065 80.719 0.0 0.0 0.0 1.200521493300716 6.724309029657295 1.200521493300716 22.21394354078236 0 0.0 0.0 0.6861818737241735 0.0 {[DS]|[MA]|[CV]|TT}Y[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SV 2.1065 - 49 + 1 1.127 34463.1 1.0 9186 5564 14737 HBL1_DMSO_200M_050219_1,14752 HBL1_DMSO_200M_050219_1,14752,SYRLLMSVS False False KIVDFSYSV 72.857918 529.2839 25295952.0 14737.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENST00000453867.6_3_15:40509736-40545453:+|nuORF;;ENSG00000156970|ENST00000287598|BUB1B;;nc|ENSG00000156970|O60566-2|BUB1B -0.3671504457791646 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14753 72.866 427.0 210660.0 25 0 42370.0 -1 0 53 1114.4415324797253 3340.302768039376 3 1114.771899402142 MULTI CID FTMS 0 0 0 14737 288776.375 0.8000984273614211 -2 0.2168350219726562 16 3 Y 1 -1 6.9897 0.0 0.0 0.20925 0.0 0.0 1635.5713970450386 1538.6648584734469 3174.236255518485 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.20925 - 51 + 1 1.127 80209.7 1.0 9187 5564 14737 HBL1_DMSO_200M_050219_1,14753 HBL1_DMSO_200M_050219_1,14753, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14754 72.873 397.0 350700.0 25 0 34864.0 + 9296 FIEETMCCSE 10 176 596.2215505822134 1190.4285482312266 2 596.2214843630791 MULTI CID FTMS 0 0 0 14737 268424.84375 0.8825769049455818 1 -0.0520172119140625 17 Unmodified _FIEETMCCSE_ REV__ENSG00000118514|ENST00000265605|ALDH8A1;REV__ENST00000349305.8_1_6:135239555-135263608:-|nuORF;REV__nc|ENSG00000118514|Q9H2A2-2|ALDH8A1;REV__nc|ENSG00000118514|Q9H2A2-4|ALDH8A1 7.289230182591677 0.6929195370588109 3 DDEM{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 7 -1 25.213 0.0 0.0 2.118 0.0 0.0 309.0460682599625 0.0 309.0460682599625 0.0 4.295153810628349 0.0 0.0 0 0.0 0.0 1.2544321917401078 0.0 DDEM{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.118 - 1063 1 1.127 105938.1 1.0 9188 5564 14737 HBL1_DMSO_200M_050219_1,14754 HBL1_DMSO_200M_050219_1,14754,FIEETMCCSE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14755 72.874 70.0 839520.0 25 0 86134.0 + 14700 IIVHFMII 8 97 493.2990742117651 984.5835954903304 2 493.2979614138603 MULTI CID FTMS 0 0 0 14737 290054.5 1.0 0 0.0 18 Unmodified _IIVHFMII_ REV__MER97b_dup20|chr2:97740228-97740619:+|1.0489492301760506|0.3406638822177393|1.62|48.0|14|3|sense 17.086550045450526 0.6584923310065985 3 {I|L}{I|L}VHH 5 -1 31.783 0.0 0.0 3.2281 0.0 0.0 0.0 382.21210657291255 382.21210657291255 10.773372054431364 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {I|L}{I|L}VHH 3.2281 - 332 + 1 1.127 49592.9 1.0 9189 5564 14737 HBL1_DMSO_200M_050219_1,14755 HBL1_DMSO_200M_050219_1,14755,IIVHFMII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14756 72.883 468.0 122660.0 25 0 25070.0 -1 0 61 1147.949816882308 2293.885080831416 2 1147.947802722454 MULTI CID FTMS 0 0 0 14737 252209.5625 1.0 0 0.0 19 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}D 3 -1 14.437 0.0 0.0 0.62937 0.0 0.0 0.0 1881.7303316461223 1881.7303316461223 0.1722032235195314 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}D 0.62937 - 65 1 1.127 57440.6 1.0 9190 5564 14737 HBL1_DMSO_200M_050219_1,14756 HBL1_DMSO_200M_050219_1,14756, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14757 72.885 85.0 370560.0 25 0 24943.0 + + 3493 KAYTSQFVSL 10 75 572.3040274287736 1142.593501924347 2 572.3052856326103 MULTI CID FTMS 0 0 0 14737 243891.25 0.8109310882304687 -1 0.1776504516601562 20 Unmodified _CKQYRFVSI_ ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1 11.640296217721598 0.521594087909532 3 S{I|L} 2 -1 14.82 0.0 0.0 1.2971 0.0 0.0 924.4669893284472 0.0 924.4669893284472 0.0 1.275910229652979 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 S{I|L} 1.2971 + + 20 + 1 1.127 31041.3 1.0 9191 5564 14737 HBL1_DMSO_200M_050219_1,14757 HBL1_DMSO_200M_050219_1,14757,CKQYRFVSI False False KAYTSQFVSL 72.884574 572.30528563261 3670009.25 14737.0 ENSG00000198380|ENST00000357308|GFPT1;;nc|ENSG00000198380|Q06210-2|GFPT1 -0.5359901587168375 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14759 72.889 3.6 11770000.0 25 0 1432500.0 + 22318 LPSHGVPLI 9 58 466.7819373338645 931.5493217345288 2 466.7818786501884 MULTI CID FTMS 0 0 0 14758 14936877.0 0.7693999640459532 -3 0.2688522338867187 1 Unmodified _LPSHGVPLI_ ENSG00000089053|ENST00000261819|ANAPC5;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5 38.15118350030904 0.0856056900103839 3 V{I|L}P{I|L}{I|L} 5 6 43.672 0.0 0.0 4.6881 0.0 0.0 378.1656056134781 0.0 378.1656056134781 0.0 35.713337517843655 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.0 V{I|L}P{I|L}{I|L} 4.6881 - 122 1 1.127 40707.4 1.0 9192 5565 14758 HBL1_DMSO_200M_050219_1,14759 HBL1_DMSO_200M_050219_1,14759,LPSHGVPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14760 72.89 56.0 2950700.0 25 0 802180.0 -1 0 50 1162.797886063532 3485.371828790796 3 1163.461962878704 MULTI CID FTMS 0 0 0 14758 5524361.0 0.0474592229580689 6 -0.5132827758789062 2 3 VH 2 -1 7.9588 0.0 0.0 0.22835 0.0 0.0 2164.780095076834 1081.4447725885375 3246.2248676653726 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VH 0.22835 - 32 + 1 1.127 139146.0 1.0 9193 5565 14758 HBL1_DMSO_200M_050219_1,14760 HBL1_DMSO_200M_050219_1,14760, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14761 72.891 9.7 3762200.0 25 0 941990.0 + 36673 TAYPQVVVV 9 70 488.2792661744117 974.5439794156234 2 488.2792541384697 MULTI CID FTMS 0 0 0 14758 5457273.5 0.614574644328668 -3 0.2688522338867187 3 Unmodified _TAYPQVVVV_ ENSG00000166532|ENST00000535829|RIMKLB;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;nc|ENSG00000166532|Q9ULI2-2|RIMKLB 14.838274106304384 0.4350285940865338 3 [QP]VY[TA]VVV 9 6 [QP]VY[TA]V + + 17.959 14.481 1.9094 1.8428 1.8428 48.729 0.0 0.0 0.0 0.0 -2.7545373444029053 -2.7545373444029053 0.0 0 0.0 0.0 0.0 0.0 [QP]VY[TA]VVV 1.8428 - 27 + 1 1.127 37622.9 1.0 9194 5565 14758 HBL1_DMSO_200M_050219_1,14761 HBL1_DMSO_200M_050219_1,14761,TAYPQVVVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14762 72.893 11.0 1594200.0 25 0 146770.0 + 17497 KPGRKRYGSA 10 43 560.3221297725755 1118.629706611951 2 560.3223754763603 MULTI CID FTMS 0 0 0 14758 4373362.5 0.8315329845291215 -3 0.2688522338867187 4 Unmodified _KPGRKRYGSA_ REV__ENSG00000100307|ENST00000216133|CBX7 1.4819007175156935 0.719781833666733 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.127 20143.4 1.0 9195 5565 14758 HBL1_DMSO_200M_050219_1,14762 HBL1_DMSO_200M_050219_1,14762,KPGRKRYGSA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14763 72.894 13.0 2468100.0 25 0 371550.0 + 33318 SFVKPKVVTE 10 65 567.3295813073205 1132.644609681441 2 567.3300048708916 MULTI CID FTMS 0 0 0 14758 3397438.25 0.7232235067345093 -4 0.348236083984375 5 Unmodified _SFVKPKVVTE_ REV__ENSG00000117245|ENST00000400463|KIF17;REV__nc|ENSG00000117245|Q9P2E2|KIF17 3.5964929083625545 0.7100006075494749 3 A 1 -1 3.4949 0.0 0.0 0.30856 0.0 0.0 926.5392915435488 132.04592310123283 1058.5852146447817 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.30856 - 8 + 1 1.127 33626.5 1.0 9196 5565 14758 HBL1_DMSO_200M_050219_1,14763 HBL1_DMSO_200M_050219_1,14763,SFVKPKVVTE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14764 72.895 42.0 1125600.0 25 0 127500.0 + 45102 YPYPYPHTLY 10 66 657.3137392995932 1312.6129256659865 2 657.3138915896416 MULTI CID FTMS 0 0 0 14758 1454679.75 0.5572075534141647 2 -0.233734130859375 6 Unmodified _YPYPYPHTLY_ ENSG00000116221|ENST00000360840|MRPL37 57.47134341890925 0.0432192961576344 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}YE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 10 6 + 73.421 0.0 0.0 5.5935 5.5935 89.427 0.0 0.0 0.0 21.33294675480037 7.269987279362624 7.269987279362624 21.33294675480037 0 1.0 2.0 0.8807196863200843 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}YE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PHT{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YA[VP][QA]Y{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YA[VP][Y{M(Oxidation (M))|F}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PHY[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[PG]{I|L}[QA]Y{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[PG]{I|L}[Y{M(Oxidation (M))|F}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]V[C(Carbamidomethyl (C))R]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[QN]|[E{I|L}]|[KN]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}YE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]{M(Oxidation (M))|F}{I|L}YE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 5.5935;3.9683;3.4091;3.3464;3.1724;3.0456;2.9829;2.6768;1.9747;1.6112 -;+;-;-;-;-;-;-;-;- + 222 1 1.127 44171.3 1.0 9197 5565 14758 HBL1_DMSO_200M_050219_1,14764 HBL1_DMSO_200M_050219_1,14764,YPYPYPHTLY True True YPYPYPHTLY 72.894988 657.313891589642 170750620.0 14758.0 ENSG00000116221|ENST00000360840|MRPL37 7.682422955830892 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14765 72.896 35.0 1051700.0 25 0 88622.0 + 28942 QAYEALTQI 9 78 518.7698654362866 1035.5251779393732 2 518.7701293826103 MULTI CID FTMS 0 0 0 14758 1146399.25 0.2111943875754835 3 -0.290740966796875 7 Unmodified _QAYEALTQI_ ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160 32.30548876998284 0.1201446275138228 3 {I|L}{I|L}{[CP]|[EA]}CQ{I|L} 7 5 18.649 0.0 0.0 1.8009 0.0 0.0 247.11173907394192 0.0 247.11173907394192 0.0 7.935535104210089 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.7887254899964358 {I|L}{I|L}{[CP]|[EA]}CQ{I|L} 1.8009 - 105 + 1 1.127 34993.8 1.0 9198 5565 14758 HBL1_DMSO_200M_050219_1,14765 HBL1_DMSO_200M_050219_1,14765,QAYEALTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14766 72.898 60.0 1239000.0 25 0 141400.0 + + 21952 PIPVIGLR 8 66 432.78695669087136 863.5593604485427 2 432.7870361208916 MULTI CID FTMS 0 0 0 14758 1090922.375 0.4341611968976557 6 -0.5132827758789062 8 Unmodified _LPPLLGVR_ ENSG00000147246|ENST00000276198|HTR2C 18.13498045792455 0.6430038125133779 3 {I|L}PPV 4 -1 55.433 0.0 0.0 6.4191 0.0 0.0 0.0 454.2795504205688 454.2795504205688 48.44335023848103 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}PPV 6.4191 - 23 + 1 1.127 66240.9 1.0 9199 5565 14758 HBL1_DMSO_200M_050219_1,14766 HBL1_DMSO_200M_050219_1,14766,LPPLLGVR False False PIPVIGLR 72.897655 432.787036120892 57606204.0 14758.0 ENSG00000147246|ENST00000276198|HTR2C -0.2079450935125351 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14767 72.9 83.0 461480.0 25 0 78612.0 + 14726 IKWQVFLML 9 63 589.3433381765957 1176.6721234199913 2 589.3433105349541 MULTI CID FTMS 0 0 0 14758 905184.125 0.4345922040775541 3 -0.290740966796875 9 Unmodified _IKWQVFLML_ REV__ENST00000310169.2_1_4:40337858-40337948:+|nuORF 0.6014990680409731 0.8936861360942873 3 V 1 -1 9.9148 0.0 0.0 0.84262 0.0 0.0 1059.5923332362006 0.0 1059.5923332362006 0.0 0.5825278453571858 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.84262 + + 2 + 1 1.127 35034.1 1.0 9200 5565 14758 HBL1_DMSO_200M_050219_1,14767 HBL1_DMSO_200M_050219_1,14767,IKWQVFLML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14768 72.901 38.0 923580.0 25 0 72435.0 + 10165 FPYIQKGL 8 70 483.2765334702212 964.5385140072424 2 483.2761413455009 MULTI CID FTMS 0 0 0 14758 847307.75 0.188767584849674 3 -0.290740966796875 10 Unmodified _FPYIQKGL_ ENSG00000119285|ENST00000366582|HEATR1 38.15118350030904 0.2652218139009398 3 {M(Oxidation (M))|F}PY{I|L}QKG{I|L} 8 0 + 50.809 0.0 0.0 5.2677 5.2677 75.607 0.0 0.0 0.0 7.699822945650787 1.4132915279646951 1.4132915279646951 1.4132915279646951 0 0.7614393726401688 0.0 0.0 0.0 + + {M(Oxidation (M))|F}PY{I|L}QKG{I|L};{M(Oxidation (M))|F}PY{I|L}QKAV;{M(Oxidation (M))|F}PY{I|L}[AG]KG{I|L};{M(Oxidation (M))|F}PY{I|L}[AG]KAV 5.2677;5.1212;4.3074;4.1609 +;-;-;- + 117 + 1 1.127 36301.5 1.0 9201 5565 14758 HBL1_DMSO_200M_050219_1,14768 HBL1_DMSO_200M_050219_1,14768,FPYIQKGL False True FPYIQKGL 72.900711 483.276141345501 154015404.0 14758.0 ENSG00000119285|ENST00000366582|HEATR1 6.70518159866333 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14769 72.904 179.0 546440.0 25 0 49978.0 14470 IGDSVMHVE 9 129 493.7361604607742 985.4577679883485 2 493.7358276247978 MULTI CID FTMS 0 0 0 14758 407450.03125 0.9202750011646011 -3 0.2688522338867187 11 Unmodified _IGDSVMHVE_ ENSG00000053524|ENST00000328913|MCF2L2;ENST00000488149.5_1_3:182948954-183027611:-|nuORF;ENST00000492331.1_1_3:183017768-183028804:-|nuORF;nc|ENSG00000053524|Q86YR7-2|MCF2L2;nc|ENSG00000053524|Q86YR7-3|MCF2L2;nc|ENSG00000053524|Q86YR7-4|MCF2L2 15.847184025352805 0.4077185912009129 3 {[VA]|[{I|L}G]}DK{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E 8 4 + 41.636 0.0 0.0 4.225 4.225 73.914 0.0 0.0 0.0 2.483236451479783 12.351000952503242 2.483236451479783 2.483236451479783 0 0.2742275032520141 1.0 0.0 0.0 {[VA]|[{I|L}G]}DK{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E;[VG]EK{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E;[{I|L}T][QA]{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E;[{I|L}T]K{[MS]|[{M(Oxidation (M))|F}A]}M{M(Oxidation (M))|F}E;{[VA]|[{I|L}G]}DS[YR]{M(Oxidation (M))|F}E;[{I|L}V][NS]{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E;[QT][{I|L}A]{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E;[VG]S{[VA]|[{I|L}G]}{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E;[VG]ES[YR]{M(Oxidation (M))|F}E;{[TV]|[{I|L}S]}{[NV]|[RG]}{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E 4.225;3.973;2.7653;2.7653;2.7112;2.6537;2.5237;2.4605;2.4592;2.3098 -;-;-;-;-;-;-;-;-;- 689 1 1.127 75998.8 1.0 9202 5565 14758 HBL1_DMSO_200M_050219_1,14769 HBL1_DMSO_200M_050219_1,14769,IGDSVMHVE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14770 72.906 77.0 1502200.0 25 0 128030.0 37412 TLARQAGEVV 10 133 522.296337439604 1042.578121946008 2 522.2997924685478 MULTI CID FTMS 0 0 0 14758 292426.625 0.0776681813548928 -8 0.8134231567382812 12 Unmodified _TLARQAGEVV_ ENSG00000133731|ENST00000256108|IMPA1;nc|ENSG00000133731|P29218-2|IMPA1;nc|ENSG00000133731|P29218-3|IMPA1 13.042465956692816 0.6287021003332052 3 [VP]M{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}MT 8 9 30.735 0.0 0.0 2.948 0.0 0.0 0.0 110.09298945993297 110.09298945993297 14.463366942313336 0.0 0.0 0.0 0 0.0 0.5086383061657274 0.3252574989159953 0.0 [VP]M{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}MT 2.948 - 393 1 1.127 95029.7 1.0 9203 5565 14758 HBL1_DMSO_200M_050219_1,14770 HBL1_DMSO_200M_050219_1,14770,TLARQAGEVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14771 72.916 544.0 585610.0 25 0 130740.0 + 11829 GLPHCKGL 8 184 412.72646782187337 823.4383827105468 2 412.7264587283134 MULTI CID FTMS 0 0 0 14758 296737.0 0.4442597128055144 -3 0.2688522338867187 13 Unmodified _GLPHCKGL_ REV__ENSG00000147614|ENST00000285393|ATP6V0D2 10.183394434864962 0.7604730176254005 3 [EP][NP]VVAV 8 -1 [EP][NP]V + + 28.205 5.3283 0.99362 3.4253 3.4253 51.11 0.0 0.0 0.0 0.0 6.870922363379052 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.0 [EP][NP]VVAV 3.4253 - 715 + 1 1.127 246994.1 1.0 9204 5565 14758 HBL1_DMSO_200M_050219_1,14771 HBL1_DMSO_200M_050219_1,14771,GLPHCKGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14772 72.923 406.0 310350.0 25 0 15357.0 -1 0 131 644.3612171921616 643.3539407255615 1 644.3624145388603 MULTI CID FTMS 0 0 0 14758 257621.28125 0.017515418805233 -7 0.6416091918945312 14 3 {[VA]|[{I|L}G]}ND{I|L}{I|L} 6 -1 + 35.398 0.0 0.0 5.5021 5.5021 79.59 0.0 0.0 0.0 3.4678748622465605 5.656753288559813 3.4678748622465605 3.195217787905662 0 0.2059771852360797 1.0 0.0 0.3494850021680094 {[VA]|[{I|L}G]}ND{I|L}{I|L};{[VA]|[{I|L}G]}GGD{I|L}{I|L};{[VA]|[{I|L}G]}ENV{I|L};{[NV]|[RG]}AD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ANV{I|L};{[VA]|[{I|L}G]}DN{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}AGGV{I|L};{[VA]|[{I|L}G]}EN{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}GN{I|L}{I|L};{[NV]|[RG]}DA{I|L}{I|L} 5.5021;5.0054;4.9697;4.963;4.8221;4.7604;4.718;4.6228;4.6128;4.5853 -;-;-;-;-;-;-;-;-;- 576 1 1.127 97870.4 1.0 9205 5565 14758 HBL1_DMSO_200M_050219_1,14772 HBL1_DMSO_200M_050219_1,14772, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14773 72.933 577.0 404060.0 25 0 35460.0 + 22470 HPIVVPGL 8 221 416.2580896832336 830.5016264332672 2 416.2579833865166 MULTI CID FTMS 0 0 0 14758 262424.0625 0.5946468000939814 -3 0.2688522338867187 15 Unmodified _LPVHVLGP_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 41.81723621529253 0.2038889569391319 3 [{I|L}P]VHVPG{I|L} 8 2 + 49.223 0.0 0.0 5.9269 5.9269 82.021 0.0 0.0 0.0 7.457195644494718 15.806817602088811 7.457195644494718 3.979400086720375 0 1.0629529932484498 1.6989700043360187 0.0 0.0 [{I|L}P]VHVPG{I|L};[{I|L}P]HVVPG{I|L};[{I|L}P]VVHPG{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VVPG{I|L};[VP]{I|L}HVPG{I|L};[VP]{I|L}VHPG{I|L};[{I|L}V]PHVPG{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V[RP]{I|L};[{I|L}V]PVHPG{I|L};[{M(Oxidation (M))|F}T]VV[RP]{I|L} 5.9269;5.4478;5.3524;4.7652;3.9836;3.4091;3.1639;2.8041;2.5894;0.94489 -;-;-;-;-;-;-;-;-;- 299 1 1.127 180759.9 1.0 9206 5565 14758 HBL1_DMSO_200M_050219_1,14773 HBL1_DMSO_200M_050219_1,14773,LPVHVLGP False False HPIVVPGL 72.932863 416.257983386517 4723080.5 14758.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 5.960370858510335 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14774 72.943 606.0 375590.0 25 0 42040.0 + 23988 LVVDWDHHL 9 206 378.52947719936776 1132.5666021983034 3 378.5293151736259 MULTI CID FTMS 0 0 0 14758 244411.25 0.6256742800413108 -1 0.0520172119140625 16 Unmodified _LVVDWDHHL_ ENSG00000168894|ENST00000306368|RNF181;ENST00000461845.1_1_2:85822886-85823939:+|nuORF 47.74868867922204 0.0453060283459952 3 [{I|L}V]VDWDHH{I|L} 9 0 + 77.432 0.0 0.0 6.8368 6.8368 80.417 0.0 0.0 0.0 27.147642715192504 1.249387366082999 1.249387366082999 1.249387366082999 0 0.3494850021680094 2.0 1.0114393726401687 0.0 + + [{I|L}V]VDWDHH{I|L};[{I|L}V]VDWDH{I|L}H;[{I|L}V]VDWD[C(Carbamidomethyl (C))K]V;[{I|L}V]VDWAAC(Carbamidomethyl (C))S{I|L};[{I|L}V]VDWAAC(Carbamidomethyl (C))TV;[{I|L}V]VDW[C(Carbamidomethyl (C))K]DV;[{I|L}V]VDWAA[KC]E;[{I|L}V]VDWHHD{I|L};[{I|L}V]VDWHHEV;[{I|L}V]VDWAA[CG]S{I|L} 6.8368;6.7265;5.6885;5.2955;5.1619;4.8782;4.8353;4.7468;4.6132;4.4863 +;-;-;-;-;-;-;-;-;- + 1223 + 1 1.127 189507.0 1.0 9207 5565 14758 HBL1_DMSO_200M_050219_1,14774 HBL1_DMSO_200M_050219_1,14774,LVVDWDHHL True True LVVDWDHHL 72.943442 378.529315173626 4011489.25 14758.0 ENST00000461845.1_1_2:85822886-85823939:+|nuORF;;ENSG00000168894|ENST00000306368|RNF181 6.5758819580078125 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14775 72.953 528.0 445140.0 25 0 38971.0 + + 41787 GVLRQIPVV 9 201 490.8160505615646 0 490.8162719607353 PEAK CID FTMS 0 0 0 14758 193006.09375 0.886138715786509 -1 0.0520172119140625 17 Unmodified _VPVLLMPLV_ nc|ENSG00000179889|Q6P996-4|PDXDC1;ENSG00000179889|ENST00000396410|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;nc|ENSG00000179889|Q6P996-3|PDXDC1 28.17323086031832 0.1269780855172776 3 VP{I|L}V{I|L}VE 7 -1 20.406 0.0 0.0 2.083 0.0 0.0 145.06940473465426 82.06695734195546 227.1363620766097 0.0 0.0 0.0 0.0 0 0.8182503180159344 0.0 0.7742275032520141 0.0 VP{I|L}V{I|L}VE 2.083 - 564 + 1 1.127 176918.7 1.0 9208 5565 14758 HBL1_DMSO_200M_050219_1,14775 HBL1_DMSO_200M_050219_1,14775,VPVLLMPLV False False GVLRQIPVV 72.952724 490.816271960735 3080945.25 14758.0 nc|ENSG00000179889|Q6P996-4|PDXDC1;;ENSG00000179889|ENST00000396410|PDXDC1;;nc|ENSG00000179889|Q6P996-5|PDXDC1;;nc|ENSG00000179889|Q6P996-3|PDXDC1 2.752764304478964 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14776 72.961 463.0 234790.0 25 0 14682.0 -1 STCTLHAYFM 10 167 615.7653895643003 1229.5162261954006 2 615.7651855349541 MULTI CID FTMS 0 0 0 14758 153857.15625 0.8899214468287088 3 -0.290740966796875 18 Carbamidomethyl (C) _STC(Carbamidomethyl (C))TLHAYFM_ nc|ENSG00000139880|Q86UP0-3|CDH24 10.823927491677226 0.6659270209832991 3 {M(Oxidation (M))|F}S[EP]{I|L}{I|L}{M(Oxidation (M))|F}M 8 -1 19.957 0.0 0.0 1.6232 0.0 0.0 247.0282098245144 0.0 247.0282098245144 0.0 -0.643265708843046 -0.643265708843046 0.0 0 0.3054621874040891 0.0 0.7059771852360797 0.0 {M(Oxidation (M))|F}S[EP]{I|L}{I|L}{M(Oxidation (M))|F}M 1.6232 - 4308 + 1 1.127 85570.6 1.0 9209 5565 14758 HBL1_DMSO_200M_050219_1,14776 HBL1_DMSO_200M_050219_1,14776,STCTLHAYFM False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14777 72.974 636.0 150320.0 25 0 24056.0 -1 0 92 972.5363036990166 0 972.5363036990166 PEAK CID FTMS 0 0 0 -1 0 19 3 VTV{I|L}DGQ 7 -1 54.625 0.0 0.0 2.8113 0.0 0.0 989.5363838523411 238.1207979791625 1227.6571818315035 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7689301784845295 2.7302046884880937 VTV{I|L}DGQ 2.8113 - 991 + 1 1.127 71518.2 1.0 9210 5565 14758 HBL1_DMSO_200M_050219_1,14777 HBL1_DMSO_200M_050219_1,14777, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14778 72.984 623.0 310210.0 25 0 15726.0 + 30263 QYIRTFVDY 9 205 602.8014889349004 1203.5884249366006 2 603.3061401247978 MULTI CID FTMS 0 0 0 14758 153316.421875 0.7690799368072618 -3 0.2688522338867187 20 Unmodified _QYIRTFVDY_ ENSG00000140526|ENST00000352732|ABHD2 69.10491478415734 0.0214449631113747 3 T{M(Oxidation (M))|F}[KC]Y 5 6 31.198 0.0 0.0 2.5921 0.0 0.0 543.2812753082927 0.0 543.2812753082927 0.0 13.296252343863303 0.0 0.0 0 0.4247425010840047 0.0 0.2742275032520141 0.5 T{M(Oxidation (M))|F}[KC]Y 2.5921 - 1659 1 1.127 138923.6 1.0 9211 5565 14758 HBL1_DMSO_200M_050219_1,14778 HBL1_DMSO_200M_050219_1,14778,QYIRTFVDY True True QYIRTFVDY 72.984411 603.306140124798 3382621.5 14758.0 ENSG00000140526|ENST00000352732|ABHD2 7.07464059193929 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14780 72.989 8.8 5607200.0 25 0 533630.0 + 41559 VPPEILNNV 9 76 497.7822691072368 993.5499852812736 2 497.7823058962822 MULTI CID FTMS 0 0 0 14779 6273759.0 0.4457537552857136 -7 0.7013168334960938 1 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 32.30548876998284 0.1201446275138228 3 [VP][EP]{I|L}{I|L}N{[NV]|[RG]} 9 0 + 44.371 0.0 0.0 4.4659 4.4659 75.566 0.0 0.0 0.0 3.0102999566398125 7.147642715192504 3.0102999566398125 3.0102999566398125 0 0.4247425010840047 2.0 0.0 0.0 + + [VP][EP]{I|L}{I|L}N{[NV]|[RG]};[EP]P{I|L}V{I|L}N{[NV]|[RG]};[VP][EP]{I|L}QV{[NV]|[RG]};[EP]P{I|L}VQV{[NV]|[RG]};[EP]P{I|L}{I|L}VN{[NV]|[RG]};[EP]{I|L}PV{I|L}N{[NV]|[RG]};[EP]PV{I|L}{I|L}N{[NV]|[RG]};[EP]{I|L}P{I|L}VN{[NV]|[RG]};[EP]{I|L}PVQV{[NV]|[RG]};[EP]PV{I|L}QV{[NV]|[RG]} 4.4659;4.1629;4.1629;3.8599;3.8599;3.8599;3.8599;3.5569;3.5569;3.5569 +;-;-;-;-;-;-;-;-;- + 300 1 1.127 43496.1 1.0 9212 5566 14779 HBL1_DMSO_200M_050219_1,14780 HBL1_DMSO_200M_050219_1,14780,VPPEILNNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14781 72.99 57.0 1057800.0 25 0 59748.0 -1 0 86 857.9294110897305 1713.8442692462609 2 857.9299194216728 MULTI CID FTMS 0 0 0 14779 759369.9375 0.6517440249962397 1 -0.1339111328125 2 3 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD{[TV]|[{I|L}S]}G[WC(Carbamidomethyl (C))]{I|L}Q 15 -1 + 91.309 0.0 0.0 5.3277 5.3277 79.617 0.0 0.0 0.0 55.89780305324595 9.348331157524967 9.348331157524967 3.679767852945943 0 1.0994850021680094 2.0 0.0 1.524227503252014 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD{[TV]|[{I|L}S]}G[WC(Carbamidomethyl (C))]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[RV]W{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW{[TV]|[{I|L}S]}G[WC(Carbamidomethyl (C))]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW[RV]W{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[KP]VN{I|L}NAD{[TV]|[{I|L}S]}G[WC(Carbamidomethyl (C))]{I|L}Q;[QP]VN{I|L}NAD[RV]W{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[QP]VN{I|L}NW{[TV]|[{I|L}S]}G[WC(Carbamidomethyl (C))]{I|L}Q;[QP]VN{I|L}NW[RV]W{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 5.3277;5.113;4.9374;4.724;3.4448;3.23;3.0544;2.841 -;-;-;-;-;-;-;- 1760 + 1 1.127 46052.6 1.0 9213 5566 14779 HBL1_DMSO_200M_050219_1,14781 HBL1_DMSO_200M_050219_1,14781, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14782 72.991 26.0 791360.0 25 0 44906.0 -1 0 45 959.113545178762 2874.318806136486 3 959.448779284954 MULTI CID FTMS 0 0 0 14779 1974772.875 0.61014603400789 -2 0.1518402099609375 3 3 E 1 -1 7.4743 0.0 0.0 0.26004 0.0 0.0 2292.016390220273 450.2358492486938 2742.252239468967 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 E 0.26004 - 17 + 1 1.127 21840.6 1.0 9214 5566 14779 HBL1_DMSO_200M_050219_1,14782 HBL1_DMSO_200M_050219_1,14782, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14783 72.992 38.0 796370.0 25 0 89222.0 + 45477 YTLDGGDIINA 11 62 576.2833372621025 1150.5521215910048 2 576.2831909060478 MULTI CID FTMS 0 0 0 14779 869682.8125 0.2013996854240089 -2 0.1518402099609375 4 Unmodified _YTLDGGDIINA_ ENSG00000204628|ENST00000512805|RACK1 29.081581746732265 0.4093582134107448 3 {I|L}[YT]{I|L} 4 9 13.94 0.0 0.0 1.2116 0.0 0.0 316.1729844833861 341.0740145318969 657.246999015283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 {I|L}[YT]{I|L} 1.2116 - 40 + 1 1.127 26888.4 1.0 9215 5566 14779 HBL1_DMSO_200M_050219_1,14783 HBL1_DMSO_200M_050219_1,14783,YTLDGGDIINA False True YTLDGGDIINA 72.992446 576.283190906048 11774945.0 14779.0 ENSG00000204628|ENST00000512805|RACK1 6.377347946166992 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14784 72.995 124.0 649590.0 25 0 70972.0 + 7539 TVIEEHLGKFGV 12 118 664.3644373522618 1326.7143217713235 2 664.8644897341728 MULTI CID FTMS 0 0 0 14779 675915.4375 0.6993030149446869 1 -0.1339111328125 5 Unmodified _EIEHKVAFLLE_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 14.40537977576856 0.7354982482299568 3 [QA]{I|L}EEH{I|L}GK{M(Oxidation (M))|F}GV 12 9 + 61.978 0.0 0.0 4.6716 4.6716 81.73 0.0 0.0 0.0 0.0 8.131037864840245 0.0 8.131037864840245 0 0.0 0.0 0.3054621874040891 0.3252574989159953 [QA]{I|L}EEH{I|L}GK{M(Oxidation (M))|F}GV;[QA]{I|L}EEH{I|L}GKV{[CT]|[{M(Oxidation (M))|F}G]};[KA]{I|L}EE[WK]EVPV;[KA]{I|L}[HA][KG]DGK{M(Oxidation (M))|F}GV;[KA]{I|L}EEH{I|L}[RK]{[CT]|[{M(Oxidation (M))|F}G]};[KA]{I|L}EE[WK]{I|L}DPV;[KA]{I|L}E[R{M(Oxidation (M))|F}]HK{I|L}W;[KA]{I|L}[HA][KG]DGKV{[CT]|[{M(Oxidation (M))|F}G]};{[TV]|[{I|L}S]}{I|L}E[HN]{M(Oxidation (M))|F}GVRR;{[TV]|[{I|L}S]}{I|L}E[HN]{M(Oxidation (M))|F}RRR 4.6716;4.0587;2.7162;2.7052;2.3739;2.3599;2.1383;2.0923;1.9324;1.8906 -;-;-;-;-;-;-;-;-;- 9219 + 1 1.127 63903.3 1.0 9216 5566 14779 HBL1_DMSO_200M_050219_1,14784 HBL1_DMSO_200M_050219_1,14784,EIEHKVAFLLE False False TVIEEHLGKFGV 72.995021 664.864489734173 8704240.0 14779.0 ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 8.02741034825643 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14785 72.997 97.0 539620.0 25 0 93339.0 + -1 EEACICLVL 9 95 525.2545934271234 1048.494633921047 2 525.2541992068291 MULTI CID FTMS 0 0 0 14779 364826.3125 0.545710116149491 -2 0.1518402099609375 6 Carbamidomethyl (C) _EEAC(Carbamidomethyl (C))ICLVL_ REV__ENST00000541340.5_1_11:73950145-73962300:+|nuORF;REV__nc|ENSG00000214517|Q9Y570-3|PPME1 28.486842064014134 0.1687311288560894 3 T{I|L}{I|L}[{I|L}V] 5 -1 24.353 0.0 0.0 2.3227 0.0 0.0 491.1145191876969 0.0 491.1145191876969 0.0 2.1471904193289504 0.0 0.0 0 0.3807196863200844 0.0 0.7614393726401688 0.0 T{I|L}{I|L}[{I|L}V] 2.3227 - 116 1 1.127 47783.6 1.0 9217 5566 14779 HBL1_DMSO_200M_050219_1,14785 HBL1_DMSO_200M_050219_1,14785,EEACICLVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14786 72.999 108.0 705200.0 25 0 91286.0 + 42228 VSLAVKHW 8 112 470.2738205521857 938.5330881711716 2 470.2719909548759 MULTI CID FTMS 0 0 0 14779 324104.125 0.4068576483964884 2 -0.19091796875 7 Unmodified _VSLAVKHW_ REV__ENSG00000165973|ENST00000357134|NELL1;REV__nc|ENSG00000165973|Q92832-2|NELL1 21.74664581756881 0.5868176546531598 3 VK[WH] 4 -1 13.416 0.0 0.0 1.4295 0.0 0.0 370.2201100080094 0.0 370.2201100080094 0.0 2.4472749489669354 0.0 0.0 0 0.5 0.0 0.0 0.0 VK[WH] 1.4295 + + 116 1 1.127 62762.5 1.0 9218 5566 14779 HBL1_DMSO_200M_050219_1,14786 HBL1_DMSO_200M_050219_1,14786,VSLAVKHW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14787 73.011 667.0 443120.0 25 0 40527.0 + 39384 VAIESTPMI 9 248 480.7558951196997 959.4972373061994 2 480.7545959353447 MULTI CID FTMS 0 0 0 14779 277997.65625 0.1725903862464169 3 -0.2555160522460937 8 Unmodified _VAIESTPMI_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON 32.116972079565 0.1225432171549407 3 {M(Oxidation (M))|F}PM[KP]PM{I|L} 8 6 + 42.719 0.0 0.0 4.4523 4.4523 72.867 0.0 0.0 0.0 16.409780573583323 10.791812460476256 10.791812460476256 1.3830269816628231 0 0.6382104921644451 0.0 0.0 0.3252574989159953 {M(Oxidation (M))|F}PM[KP]PM{I|L};{M(Oxidation (M))|F}PM[KP]MP{I|L};{M(Oxidation (M))|F}PPE{[QV]|[N{I|L}]|[RA]|[KV]}M{I|L};{M(Oxidation (M))|F}PM[KP]PP{M(Oxidation (M))|F};{M(Oxidation (M))|F}P[HV][HN]P{I|L};{M(Oxidation (M))|F}PM[KP]P{M(Oxidation (M))|F}P;{M(Oxidation (M))|F}PM[KP]M{I|L}P;{M(Oxidation (M))|F}PPE{[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F};{M(Oxidation (M))|F}PM[TA][PS]P{I|L};{M(Oxidation (M))|F}P[R{M(Oxidation (M))|F}][PS]P{I|L} 4.4523;4.3081;3.8248;3.3275;2.9942;2.9281;2.784;2.7;2.6901;2.6805 -;-;-;-;-;-;-;-;-;- 2718 + 1 1.127 220918.8 1.0 9219 5566 14779 HBL1_DMSO_200M_050219_1,14787 HBL1_DMSO_200M_050219_1,14787,VAIESTPMI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14788 73.015 216.0 487100.0 25 0 74672.0 + 14469 IGANKQRL 8 126 450.2748616592415 898.535170385283 2 450.2734557986259 MULTI CID FTMS 0 0 0 14779 260499.5 0.0168415323198999 -7 0.7013168334960938 9 Unmodified _IGANKQRL_ REV__ENSG00000011114|ENST00000334746|BTBD7;REV__nc|ENSG00000011114|Q9P203-5|BTBD7 11.114462752807354 0.7467182956244686 3 {I|L} 1 -1 13.495 0.0 0.0 1.5019 0.0 0.0 767.4401824475862 0.0 767.4401824475862 0.0 3.661968799114845 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5019 + + 122 + 1 1.127 85098.1 1.0 9220 5566 14779 HBL1_DMSO_200M_050219_1,14788 HBL1_DMSO_200M_050219_1,14788,IGANKQRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14789 73.029 800.0 762430.0 25 0 68139.0 + 1263 AILPHLRSL 9 310 340.5502628792009 1018.6289592378027 3 340.5498535037041 MULTI CID FTMS 0 0 0 14779 239852.5625 0.2170780864117222 -2 0.1518402099609375 10 Unmodified _AILPHLRSL_ ENSG00000115524|ENST00000335508|SF3B1 29.43715596616401 0.1566398223704148 3 [{I|L}A]{I|L}PH{I|L}RS{I|L} 9 0 + 56.811 0.0 0.0 5.5772 5.5772 79.328 0.0 0.0 0.0 27.147642715192504 3.832167518513309 3.832167518513309 3.0102999566398125 0 0.3252574989159953 2.0 0.7742275032520141 0.6307196863200843 + + [{I|L}A]{I|L}PH{I|L}RS{I|L};[{I|L}A]{I|L}P{I|L}HRS{I|L};[{I|L}A]{I|L}PH{I|L}RTV;[{I|L}A]{I|L}PH{I|L}{[TV]|[{I|L}S]}R;[{I|L}A]{I|L}{I|L}PHRS{I|L};[{I|L}A]{I|L}P{I|L}HRTV;[{I|L}A]{I|L}P{I|L}H{[TV]|[{I|L}S]}R;[{I|L}A]{I|L}{I|L}PHRTV;[{I|L}A]{I|L}{I|L}PH{[TV]|[{I|L}S]}R;[{I|L}A]{I|L}PH[RV]T{I|L} 5.5772;5.2817;5.201;5.1242;4.9429;4.9055;4.8287;4.5667;4.4899;4.3556 +;-;-;-;-;-;-;-;-;- + 425 + 1 1.127 486173.0 0.9700000286102296 9221 5566 14779 HBL1_DMSO_200M_050219_1,14789 HBL1_DMSO_200M_050219_1,14789,AILPHLRSL False True AILPHLRSL 73.028921 340.549853503704 12310029.0 14779.0 ENSG00000115524|ENST00000335508|SF3B1 1.6818277935187025 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14790 73.041 696.0 337900.0 25 0 31035.0 -1 0 119 1177.4643795186569 0 1177.462084949017 PEAK CID FTMS 0 0 0 14779 250620.609375 1.0 0 0.0 11 3 MSS[QP]SSV 8 -1 40.271 0.0 0.0 1.7115 0.0 0.0 1194.4388165550888 352.1153522487803 1546.554168803869 0.0 0.0 0.0 0.0 0 0.0 0.0 1.9916440611282624 0.0 MSS[QP]SSV 1.7115 - 5460 + 1 1.127 157648.1 1.0 9222 5566 14779 HBL1_DMSO_200M_050219_1,14790 HBL1_DMSO_200M_050219_1,14790, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14791 73.046 262.0 441020.0 25 0 71895.0 + 41872 VPYPTASLV 9 144 473.7660322814071 945.5175116296142 2 473.7665283083916 MULTI CID FTMS 0 0 0 14779 223180.3125 0.3574545692243426 -2 0.1518402099609375 12 Unmodified _VPYPTASLV_ ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-3|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1 46.92087301778293 0.0471210510596396 3 {NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{M(Oxidation (M))|F}V{I|L}V 8 6 + 49.971 0.0 0.0 5.285 5.285 78.921 0.0 0.0 0.0 3.3184844120941506 8.226825097560422 3.3184844120941506 3.3184844120941506 0 0.6549471895720985 1.5228787452803376 1.579689690656103 0.0 {NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{M(Oxidation (M))|F}V{I|L}V;[TP]AS{I|L}{M(Oxidation (M))|F}V{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[AG]{I|L}{M(Oxidation (M))|F}V{I|L}V;{[QN]|[E{I|L}]|[KN]}N{I|L}{M(Oxidation (M))|F}V{I|L}V;[VP][{M(Oxidation (M))|F}E]GSV{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSV{I|L}V;[{I|L}A]GD{I|L}{M(Oxidation (M))|F}V{I|L}V;[Q{I|L}]D{I|L}{M(Oxidation (M))|F}V{I|L}V;[VP][MT]TSV{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PA]TSV{I|L}V 5.285;4.9341;4.3055;4.0432;4.0313;3.9288;3.7699;3.6744;3.6362;3.6175 -;-;-;-;-;-;-;-;-;- 739 1 1.127 89857.6 1.0 9223 5566 14779 HBL1_DMSO_200M_050219_1,14791 HBL1_DMSO_200M_050219_1,14791,VPYPTASLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14792 73.05 204.0 461780.0 25 0 32668.0 + 5234 TQYEFQVRV 9 134 585.2479302244941 1168.481307515788 2 585.2484008669853 MULTI CID FTMS 0 0 0 14779 212628.84375 0.4985762914552207 -3 0.3294906616210937 13 Unmodified _DIYVSDVEDD_ ENSG00000100385|ENST00000216223|IL2RB 6.723162845929126 0.6955379296933136 3 [{I|L}V]D 3 7 23.952 0.0 0.0 2.0499 0.0 0.0 0.0 838.2778522758068 838.2778522758068 9.25968732272281 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]D 2.0499 - 401 1 1.127 78845.2 1.0 9224 5566 14779 HBL1_DMSO_200M_050219_1,14792 HBL1_DMSO_200M_050219_1,14792,DIYVSDVEDD False False TQYEFQVRV 73.049798 585.248400866985 3386595.25 14779.0 ENSG00000100385|ENST00000216223|IL2RB 1.8039311170578003 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14793 73.054 135.0 737150.0 25 0 68032.0 + 2272 AQGGVLPNI 9 120 434.7481829402984 867.4818129473967 2 435.2501098513603 MULTI CID FTMS 0 0 0 14779 217897.421875 0.0365125283314766 -6 0.6438217163085938 14 Unmodified _AQGGVLPNI_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000454426.1_1_6:25882256-25882391:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 39.957323273325 0.0756908302845263 3 [QA]NV{I|L}PN{I|L} 8 2 [QA]NV{I|L} + + 21.981 9.0411 1.7212 2.5339 2.5339 49.421 0.0 0.0 0.0 0.0 9.393878342760043 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.6307196863200843 [QA]NV{I|L}PN{I|L} 2.5339 - 210 + 1 1.127 81116.2 1.0 9225 5566 14779 HBL1_DMSO_200M_050219_1,14793 HBL1_DMSO_200M_050219_1,14793,AQGGVLPNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14794 73.065 641.0 307000.0 25 0 24439.0 + 6963 KLFEFMHET 9 209 591.78962041899 1181.56468790478 2 591.2864868044853 MULTI CID FTMS 0 0 0 14779 180835.4375 0.8761377008996079 1 -0.1339111328125 15 Unmodified _EEIEYMIQK_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 10.823927491677226 0.5436922275383211 3 [DP]HK{I|L}GYE[HS] 10 9 + 34.01 0.0 0.0 2.8784 2.8784 67.121 0.0 0.0 0.0 0.3471687667285792 0.3471687667285792 0.3471687667285792 0.3471687667285792 0 0.2887254899964357 0.8538719643217619 0.3252574989159953 0.0 [DP]HK{I|L}GYE[HS];{[QN]|[E{I|L}]|[KN]}EYG{I|L}VC(Carbamidomethyl (C))VT;{[QN]|[E{I|L}]|[KN]}EYG{I|L}VC(Carbamidomethyl (C))S{I|L};{[QN]|[E{I|L}]|[KN]}EYG{I|L}VC(Carbamidomethyl (C))TV;{[QN]|[E{I|L}]|[KN]}EYGV{I|L}C(Carbamidomethyl (C))VT;{[QN]|[E{I|L}]|[KN]}EYGV{I|L}C(Carbamidomethyl (C))S{I|L};{[QN]|[E{I|L}]|[KN]}EYG{I|L}VCGVT;{[QN]|[E{I|L}]|[KN]}EYGV{I|L}C(Carbamidomethyl (C))TV;{[QN]|[E{I|L}]|[KN]}EYG{I|L}VCGS{I|L};{[QN]|[E{I|L}]|[KN]}EYG{I|L}VCGTV 2.8784;2.849;2.8015;2.6091;2.4452;2.3977;2.2276;2.2053;2.1801;1.9877 -;-;-;-;-;-;-;-;-;- 6414 1 1.127 144963.0 1.0 9226 5566 14779 HBL1_DMSO_200M_050219_1,14794 HBL1_DMSO_200M_050219_1,14794,EEIEYMIQK False False KLFEFMHET 73.064881 591.286486804485 2016543.375 14779.0 ENSG00000082898|ENST00000401558|XPO1;;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 6.334596633911133 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14795 73.079 800.0 281310.0 25 0 27661.0 + 13650 HPVILASI 8 215 425.2636551062736 848.5127572793473 2 425.2634155154228 MULTI CID FTMS 0 0 0 14779 180076.0625 0.4442018639810178 1 -0.1339111328125 16 Unmodified _HPVILASI_ ENSG00000175390|ENST00000651655|EIF3F;ENST00000528653.1_1_11:8009127-8013479:+|nuORF 38.99230528602208 0.2511498934509823 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}{I|L}AS{I|L} 8 0 + 45.855 0.0 0.0 5.4042 5.4042 83.808 0.0 0.0 0.0 7.530251128236983 10.172203223519531 7.530251128236983 7.530251128236983 0 0.8182503180159344 0.5086383061657274 1.524227503252014 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}{I|L}AS{I|L};[{I|L}P]VH{I|L}AS{I|L};[{I|L}P]V{I|L}HAS{I|L};[VP]{I|L}H{I|L}AS{I|L};[{I|L}P]V{I|L}AHS{I|L};[VP]{I|L}{I|L}HAS{I|L};[VP]H{I|L}{I|L}AS{I|L};[HV]A{I|L}[{I|L}P]S{I|L};[{I|L}V]PH{I|L}AS{I|L};[VP]{I|L}{I|L}AHS{I|L} 5.4042;4.5167;4.162;3.6409;3.3382;3.2861;3.1389;2.8423;2.6588;2.4624 +;-;-;-;-;-;-;-;-;- + 431 1 1.127 174454.4 0.9900000095367432 9227 5566 14779 HBL1_DMSO_200M_050219_1,14795 HBL1_DMSO_200M_050219_1,14795,HPVILASI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14796 73.09 675.0 194390.0 25 0 12501.0 + 12655 GVLFLPVFFR 10 183 597.8562718837777 1193.697990834355 2 597.8556396365166 MULTI CID FTMS 0 0 0 14779 149943.71875 0.1504631646139864 4 -0.3260726928710937 17 Unmodified _GVLFLPVFFR_ REV__ENSG00000167531|ENST00000301046|LALBA 4.3292370932331545 0.7066112369704343 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F} 3 -1 20.942 0.0 0.0 1.7544 0.0 0.0 0.0 809.5065900377334 809.5065900377334 11.10924374808178 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F} 1.7544 - 263 1 1.127 97230.2 1.0 9228 5566 14779 HBL1_DMSO_200M_050219_1,14796 HBL1_DMSO_200M_050219_1,14796,GVLFLPVFFR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14797 73.104 692.0 175870.0 25 0 21095.0 + + 27770 TQFPDGVDVRV 11 170 617.3833667460692 0 617.3811523318291 PEAK CID FTMS 0 0 0 14779 126493.9921875 0.59028010544175 -2 0.1518402099609375 18 Unmodified _PLPLVPFPQLL_ ENST00000413021.2_2_16:68279208-68293154:+|nuORF;ENST00000565460.1_1_16:68288822-68288945:+|nuORF;ENSG00000103066|ENST00000219345|PLA2G15 10.073929032068715 0.4495801685015257 3 {M(Oxidation (M))|F}PD 3 -1 9.0411 0.0 0.0 0.73341 0.0 0.0 229.2383831397636 641.3454073541624 870.583790493926 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}PD 0.73341 - 189 + 1 1.127 91743.7 1.0 9229 5566 14779 HBL1_DMSO_200M_050219_1,14797 HBL1_DMSO_200M_050219_1,14797,PLPLVPFPQLL False False TQFPDGVDVRV 73.103646 617.381152331829 2975587.5 14779.0 ENST00000413021.2_2_16:68279208-68293154:+|nuORF;;ENST00000565460.1_1_16:68288822-68288945:+|nuORF;;ENSG00000103066|ENST00000219345|PLA2G15 4.750999530156453 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14798 73.108 202.0 339030.0 25 0 26645.0 + -1 CVCYAFIMVV 10 95 582.2662014400591 1162.5178499469182 2 582.2664062380791 MULTI CID FTMS 0 0 0 14779 114443.6953125 0.1607346805582133 4 -0.3260726928710937 19 Oxidation (M) _CVCYAFIM(Oxidation (M))VV_ REV__ENSG00000102076|ENST00000369951|OPN1LW 7.910154910731844 0.6900473968920092 3 Y{I|L}{M(Oxidation (M))|F} 3 -1 16.198 0.0 0.0 1.3933 0.0 0.0 217.0260021564744 519.2907808893186 736.316783045793 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}{M(Oxidation (M))|F} 1.3933 - 105 + 1 1.127 56977.3 1.0 9230 5566 14779 HBL1_DMSO_200M_050219_1,14798 HBL1_DMSO_200M_050219_1,14798,CVCYAFIMVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14799 73.118 617.0 105780.0 25 0 7150.2 -1 IHCQWCEERIF 11 136 789.3536823653892 1576.6928117975783 2 789.8547241091728 MULTI CID FTMS 0 0 0 14779 95059.890625 1.0 0 0.0 20 2 Carbamidomethyl (C) _IHC(Carbamidomethyl (C))QWC(Carbamidomethyl (C))EERIF_ ENSG00000121486|ENST00000367506|TRMT1L;nc|ENSG00000121486|Q7Z2T5-2|TRMT1L 1.4819007175156935 0.86815623132643 3 {[TV]|[{I|L}S]}{I|L}WA 5 -1 40.084 0.0 0.0 2.5423 0.0 0.0 0.0 1003.3487925927532 1003.3487925927532 25.020313176878823 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.5189301784845295 0.0 {[TV]|[{I|L}S]}{I|L}WA 2.5423 - 666 1 1.127 49939.1 1.0 9231 5566 14779 HBL1_DMSO_200M_050219_1,14799 HBL1_DMSO_200M_050219_1,14799,IHCQWCEERIF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14801 73.123 1.7 34561000.0 25 0 5529500.0 + 21725 LPLTRIPP 8 50 453.7921119878436 905.5696710424872 2 453.7924987673759 MULTI CID FTMS 0 0 0 14800 37887224.0 0.5915436257370714 -1 0.1339111328125 1 Unmodified _LPLTRIPP_ REV__ENST00000274853.7_1_6:30653942-30654101:-|nuORF 15.847184025352805 0.6768015514314958 3 {I|L}PPP 4 -1 54.68 0.0 0.0 6.0382 0.0 0.0 0.0 498.3017672174438 498.3017672174438 47.69077524932108 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPP 6.0382 - 13 + 1 1.131 48975.1 1.0 9232 5567 14800 HBL1_DMSO_200M_050219_1,14801 HBL1_DMSO_200M_050219_1,14801,LPLTRIPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14802 73.124 3.5 10137000.0 25 0 768010.0 + 6356 DVREIVNNI 9 77 536.2944518786005 0 536.2936889529228 PEAK CID FTMS 0 0 0 14800 8702770.0 1.0 0 0.0 2 Unmodified _DVREIVNNI_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 18.373094154950223 0.2162240501727768 3 DNV{I|L}S{[HG]|PP}S 8 7 26.338 0.0 0.0 2.4601 0.0 0.0 130.11660043513217 128.0720156305297 258.1886160656619 0.0 0.0 0.0 0.0 0 0.6462566630072955 0.0 0.5796896906561032 0.0 DNV{I|L}S{[HG]|PP}S 2.4601 - 246 + 1 1.131 35042.2 1.0 9233 5567 14800 HBL1_DMSO_200M_050219_1,14802 HBL1_DMSO_200M_050219_1,14802,DVREIVNNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14803 73.125 6.3 7008100.0 25 0 1033900.0 + 38900 TVLEEIGNRV 10 63 565.3144290940178 1128.6143052548357 2 565.3145019412041 MULTI CID FTMS 0 0 0 14800 8393065.0 0.7094721105148312 -1 0.1339111328125 3 Unmodified _TVLEEIGNRV_ ENSG00000157456|ENST00000288207|CCNB2;ENST00000561077.1_1_15:59397440-59406659:+|nuORF 29.84058131909904 0.2982332456971691 3 {[TV]|[{I|L}S]}{I|L}EE{I|L}MV[VP] 10 3 + 70.891 0.0 0.0 6.2812 6.2812 93.185 0.0 0.0 0.0 60.43305028184122 2.2969624387961574 2.2969624387961574 70.89062518744797 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{I|L}EE{I|L}MV[VP] 6.2812 - 81 + 1 1.131 38414.1 1.0 9234 5567 14800 HBL1_DMSO_200M_050219_1,14803 HBL1_DMSO_200M_050219_1,14803,TVLEEIGNRV False True TVLEEIGNRV 73.124883 565.314501941204 77895408.0 14800.0 ENSG00000157456|ENST00000288207|CCNB2;;ENST00000561077.1_1_15:59397440-59406659:+|nuORF 5.267635742823283 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14804 73.126 13.0 2648800.0 25 0 415580.0 42912 VVQEKIWSV 9 55 544.3086855628304 1086.6028181924607 2 544.3090087771416 MULTI CID FTMS 0 0 0 14800 3487733.0 0.6895067445070248 -1 0.1339111328125 4 Unmodified _VVQEKIWSV_ ENSG00000165072|ENST00000377182|MAMDC2 1.844237919475145 0.850302753031785 3 {I|L} 1 8 10.379 0.0 0.0 0.95514 0.0 0.0 955.5079675838656 0.0 955.5079675838656 0.0 10.37860356969059 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.95514 + + 1 + 1 1.131 34164.4 1.0 9235 5567 14800 HBL1_DMSO_200M_050219_1,14804 HBL1_DMSO_200M_050219_1,14804,VVQEKIWSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14805 73.127 16.0 3684400.0 25 0 321940.0 + 21633 LPLARIATV 9 63 477.3108331829908 952.6071134327816 2 477.3109008669853 MULTI CID FTMS 0 0 0 14800 3252879.5 0.4988463463365601 -1 0.1339111328125 5 Unmodified _LPLARIATV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 27.628801355627647 0.1796483985696185 3 {I|L}P{I|L}A 4 5 55.745 0.0 0.0 5.8519 0.0 0.0 0.0 555.3251987639883 555.3251987639883 41.76599703664159 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P{I|L}A 5.8519 + + 68 + 1 1.131 49942.4 1.0 9236 5567 14800 HBL1_DMSO_200M_050219_1,14805 HBL1_DMSO_200M_050219_1,14805,LPLARIATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14806 73.128 21.0 2459300.0 25 0 356260.0 + 3097 AVPDEIPPLE 10 65 540.2848465386849 1078.5551401441696 2 540.2846557497978 MULTI CID FTMS 0 0 0 14800 2370130.75 0.0589819165447442 8 -0.3815841674804687 6 Unmodified _AVPDEIPPLE_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 19.62595529434964 0.5182375435722777 3 [DP]E{I|L}AVPP{I|L}E 10 4 [DP]E{I|L}AV + + 30.407 22.396 3.5873 2.8193 2.8193 49.846 0.0 0.0 0.0 0.0 0.1861430990998513 0.0 0.0 0 0.5 0.0 0.25 0.0 [DP]E{I|L}AVPP{I|L}E 2.8193 - 133 + 1 1.131 49748.7 1.0 9237 5567 14800 HBL1_DMSO_200M_050219_1,14806 HBL1_DMSO_200M_050219_1,14806,AVPDEIPPLE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14807 73.13 20.0 1815400.0 25 0 337550.0 + 13539 HPFEAQTLI 9 65 528.2799578265451 1054.54536271989 2 528.2797119021416 MULTI CID FTMS 0 0 0 14800 2114377.0 0.3128947205248827 -2 0.233734130859375 7 Unmodified _HPFEAQTLI_ ENSG00000136045|ENST00000412830|PWP1 36.506200033944 0.094635877243972 3 NAQT{I|L}{I|L} 6 4 36.643 0.0 0.0 3.4748 0.0 0.0 396.1773853986344 0.0 396.1773853986344 0.0 22.039106406846045 0.0 0.0 0 0.6237125054200234 0.0 0.5 0.0 NAQT{I|L}{I|L} 3.4748 - 50 1 1.131 35028.3 1.0 9238 5567 14800 HBL1_DMSO_200M_050219_1,14807 HBL1_DMSO_200M_050219_1,14807,HPFEAQTLI True True HPFEAQTLI 73.129597 528.279711902142 128686128.0 14800.0 ENSG00000136045|ENST00000412830|PWP1 6.573983510335286 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14808 73.131 30.0 1483000.0 25 0 327240.0 + 18408 KVVEDGILKL 10 63 557.3474769809325 1112.6804010286648 2 557.3477050662041 MULTI CID FTMS 0 0 0 14800 1986361.625 0.8042098042696738 -1 0.1339111328125 8 Unmodified _KVVEDGILKL_ ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1 37.77132515983256 0.1811013699114492 3 {I|L}{I|L}A[C(Carbamidomethyl (C))H]K{I|L} 7 8 29.979 0.0 0.0 2.6943 0.0 0.0 259.18991512866336 0.0 259.18991512866336 0.0 0.8941361418293425 0.0 0.0 0 0.5 0.0 0.0 0.2887254899964357 {I|L}{I|L}A[C(Carbamidomethyl (C))H]K{I|L} 2.6943 - 139 + 1 1.131 38157.9 1.0 9239 5567 14800 HBL1_DMSO_200M_050219_1,14808 HBL1_DMSO_200M_050219_1,14808,KVVEDGILKL False True KVVEDGILKL 73.130777 557.347705066204 83243628.0 14800.0 ENSG00000044115|ENST00000302763|CTNNA1;;nc|ENSG00000044115|P35221-2|CTNNA1 6.517984549204509 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14809 73.133 97.0 453160.0 25 0 41424.0 + 17814 KQLDDLKVEL 10 86 600.8452342256743 1199.6759155181485 2 600.8455078005791 MULTI CID FTMS 0 0 0 14800 1248267.5 0.003714840557499 21 -1.482391357421875 9 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 55.24861242081279 0.0493457817857391 3 {[QN]|[E{I|L}]|[KN]}KND{I|L}KV 8 5 54.756 0.0 0.0 4.5642 0.0 0.0 0.0 257.1158928953548 257.1158928953548 34.53447425662482 0.0 0.0 0.0 0 1.110924374808178 0.0 1.0994850021680094 0.0 {[QN]|[E{I|L}]|[KN]}KND{I|L}KV 4.5642 - 479 1 1.131 34297.1 1.0 9240 5567 14800 HBL1_DMSO_200M_050219_1,14809 HBL1_DMSO_200M_050219_1,14809,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14810 73.134 43.0 1169100.0 25 0 121510.0 + 13995 HYYSITINY 9 79 587.283178058766 1172.551803184332 2 587.2828246951103 MULTI CID FTMS 0 0 0 14800 1155270.25 0.4087020977432716 -1 0.1339111328125 10 Unmodified _HYYSITINY_ ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF 63.562846038646086 0.0241094678104353 3 {[WN]|[YH]}YS{I|L}T[SG][{M(Oxidation (M))|F}V] 10 4 + 53.618 0.0 0.0 4.5728 4.5728 86.949 0.0 0.0 0.0 3.748162098248997 18.837258228914703 3.748162098248997 43.72363747448347 0 0.0 1.0457574905606752 1.3494850021680094 0.0 {[WN]|[YH]}YS{I|L}T[SG][{M(Oxidation (M))|F}V];{[QV]|[N{I|L}]|[RA]|[KV]}[YC(Carbamidomethyl (C))]{I|L}T[SG][{M(Oxidation (M))|F}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[YV]C(Carbamidomethyl (C)){I|L}[{M(Oxidation (M))|F}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[YV]E[SG][{M(Oxidation (M))|F}V] 4.5728;0.84385;0.38892;0.18021 -;-;-;- 228 1 1.131 48835.7 1.0 9241 5567 14800 HBL1_DMSO_200M_050219_1,14810 HBL1_DMSO_200M_050219_1,14810,HYYSITINY True True HYYSITINY 73.13412 587.28282469511 38703100.0 14800.0 ENST00000477232.5_1_2:162241962-162267908:+|nuORF;;ENSG00000115233|ENST00000409682|PSMD14 7.552835623423259 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14811 73.136 89.0 768900.0 25 0 128690.0 -1 0 88 625.3194777973866 624.3122013307866 1 625.3192626833916 MULTI CID FTMS 0 0 0 14800 977405.25 0.0702277200988442 8 -0.3815841674804687 11 3 VA{I|L}E 4 -1 50.748 0.0 0.0 8.1287 0.0 0.0 0.0 209.05718408756096 209.05718408756096 34.29471286398595 0.0 0.0 0.0 0 0.1803115997617927 1.0457574905606752 0.6549471895720984 0.0 VA{I|L}E 8.1287 - 147 + 1 1.131 55310.5 1.0 9242 5567 14800 HBL1_DMSO_200M_050219_1,14811 HBL1_DMSO_200M_050219_1,14811, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14812 73.138 96.0 1306300.0 25 0 120060.0 + 18419 KVVTIIPKI 9 143 505.8520765555019 1009.689600177804 2 505.8521911501884 MULTI CID FTMS 0 0 0 14800 690260.0625 0.5395680216121104 -1 0.1339111328125 12 Unmodified _KVVTIIPKI_ ENSG00000170632|ENST00000323716|ARMC10;ENST00000313754.4_1_3:94225612-94226386:-|nuORF;nc|ENSG00000170632|Q8N2F6-2|ARMC10;nc|ENSG00000170632|Q8N2F6-3|ARMC10;nc|ENSG00000170632|Q8N2F6-4|ARMC10;nc|ENSG00000170632|Q8N2F6-5|ARMC10;nc|ENSG00000170632|Q8N2F6-6|ARMC10 45.739877483867886 0.0497104363764649 3 KVV{I|L}T{I|L}PK{I|L} 9 2 + 54.992 0.0 0.0 5.4464 5.4464 88.432 0.0 0.0 0.0 40.299026525323136 8.15044357464103 8.15044357464103 16.989700043360187 0 2.196112638890823 0.0 0.0 0.0 KVV{I|L}T{I|L}PK{I|L};KVV{I|L}T{I|L}{I|L}[KP] 5.4464;3.7637 -;- 1760 + 1 1.131 95419.8 1.0 9243 5567 14800 HBL1_DMSO_200M_050219_1,14812 HBL1_DMSO_200M_050219_1,14812,KVVTIIPKI True True KVVTIIPKI 73.138197 505.852191150188 9638796.0 14800.0 nc|ENSG00000170632|Q8N2F6-3|ARMC10;;nc|ENSG00000170632|Q8N2F6-5|ARMC10;;nc|ENSG00000170632|Q8N2F6-2|ARMC10;;ENST00000313754.4_1_3:94225612-94226386:-|nuORF;;ENSG00000170632|ENST00000323716|ARMC10;;nc|ENSG00000170632|Q8N2F6-4|ARMC10;;nc|ENSG00000170632|Q8N2F6-6|ARMC10 1.379045804341634 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14813 73.142 181.0 760830.0 25 0 100150.0 + 17823 KQLDDLKVEL 10 152 400.8994160702367 1199.67641881091 3 400.8993408083916 MULTI CID FTMS 0 0 0 14800 672739.75 0.0032551499167559 23 -1.5966033935546875 13 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 78.61045856554632 0.0182065998627436 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L} 10 4 + 82.529 0.0 0.0 6.8793 6.8793 85.422 0.0 0.0 0.0 7.231975075880328 17.174617874626037 7.231975075880328 4.393326938302636 0 1.1549471895720984 1.6989700043360187 1.0356668758921828 1.1237125054200234 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};[KQ]{I|L}DD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};[Q{I|L}]KDD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}{NN|[MP]|[D{I|L}]|[EV]}K{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]D{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};{[TV]|[{I|L}S]}[VG]QD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QDK{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L};[K{I|L}]QDD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L} 6.8793;6.513;6.3428;6.2764;6.2082;6.1902;6.1153;6.0528;5.9766;5.8633 -;-;-;+;-;-;-;-;-;- + 6222 1 1.131 110815.9 1.0 9244 5567 14800 HBL1_DMSO_200M_050219_1,14813 HBL1_DMSO_200M_050219_1,14813,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14814 73.144 82.0 1017800.0 25 0 106250.0 + 41826 VPYEKGFAL 9 97 512.2794656316073 1022.5443783300146 2 512.2800170779228 MULTI CID FTMS 0 0 0 14800 675706.875 0.1196949563357879 -6 0.58197021484375 14 Unmodified _VPYEKGFAL_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 37.97399986684836 0.0865783450051559 3 VPYE 4 5 59.285 0.0 0.0 5.7978 0.0 0.0 0.0 531.2946177330113 531.2946177330113 16.844924275137743 0.0 0.0 0.0 0 0.6549471895720985 1.6989700043360187 0.3807196863200844 0.0 + VPYE 5.7978 + + 853 + 1 1.131 76175.0 1.0 9245 5567 14800 HBL1_DMSO_200M_050219_1,14814 HBL1_DMSO_200M_050219_1,14814,VPYEKGFAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14815 73.147 172.0 1198300.0 25 0 246860.0 + 19271 LEKLLSTL 8 148 458.7878679525143 915.5611829718288 2 458.7876159548759 MULTI CID FTMS 0 0 0 14800 629361.5625 0.0898930697765797 -6 0.58197021484375 15 Unmodified _LEKLLSTL_ REV__ENSG00000054654|ENST00000555002|SYNE2;REV__ENST00000557005.1_1_14:64490935-64514966:+|nuORF;REV__nc|ENSG00000054654|Q8WXH0|SYNE2 8.593279151180031 0.7721714526254883 3 {I|L} 1 -1 12.474 0.0 0.0 1.3625 0.0 0.0 784.4661645165537 0.0 784.4661645165537 0.0 4.146518864155123 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3625 + + 295 + 1 1.131 160723.7 1.0 9246 5567 14800 HBL1_DMSO_200M_050219_1,14815 HBL1_DMSO_200M_050219_1,14815,LEKLLSTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14816 73.15 173.0 1535600.0 25 0 162060.0 -1 PVSLTKLMLS 10 178 552.8224288558471 1103.630304778494 2 552.8227416872978 MULTI CID FTMS 0 0 0 14800 537766.125 0.2044799345227542 -1 0.1339111328125 16 Oxidation (M) _PVSLTKLM(Oxidation (M))LS_ ENSG00000181458|ENST00000323523|TMEM45A 9.38312468134398 0.6832340498775793 3 [RV]{I|L}EK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV 9 -1 + 12.454 0.0 0.0 1.1284 1.1284 69.026 0.0 0.0 0.0 2.272597827964864 1.969108626196805 1.969108626196805 2.4033215531036944 0 0.0 0.0 0.4978499570595206 0.0 [RV]{I|L}EK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV;[RV]{I|L}EK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L};[RV]{I|L}EK[YT]PV 1.1284;0.91066;0.156 -;-;- 309 + 1 1.131 201718.2 1.0 9247 5567 14800 HBL1_DMSO_200M_050219_1,14816 HBL1_DMSO_200M_050219_1,14816,PVSLTKLMLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14817 73.158 405.0 579050.0 25 0 64709.0 + 6117 DSVRLLAV 8 175 436.7636369814839 871.5127210297678 2 436.7639343142509 MULTI CID FTMS 0 0 0 14800 534078.625 0.5398722300952529 -1 0.1339111328125 17 Unmodified _DSVRLLAV_ ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 58.6788170122104 0.1149141431586871 3 [{I|L}A]SW{I|L}{I|L}AV 8 4 + 69.853 0.0 0.0 8.0151 8.0151 90.546 0.0 0.0 0.0 6.690067809585763 16.409780573583326 6.690067809585763 6.690067809585763 0 0.5 1.5228787452803376 0.9269359821608808 0.0 [{I|L}A]SW{I|L}{I|L}AV;{[VA]|[{I|L}G]}TW{I|L}{I|L}AV;[{I|L}A]SW{I|L}A{I|L}V;{[TV]|[{I|L}S]}AW{I|L}{I|L}AV;[{I|L}T]GW{I|L}{I|L}AV;{[VA]|[{I|L}G]}TW{I|L}A{I|L}V;[TA]VW{I|L}{I|L}AV;[VS]RD{I|L}{I|L}AV;[{I|L}A]SWA{I|L}{I|L}V;{[SA]|[TG]}{I|L}W{I|L}{I|L}AV 8.0151;7.2475;6.4193;5.8846;5.6609;5.6516;5.6036;5.486;5.3972;5.3223 -;-;-;-;-;-;-;-;-;- 1507 1 1.131 182479.8 1.0 9248 5567 14800 HBL1_DMSO_200M_050219_1,14817 HBL1_DMSO_200M_050219_1,14817,DSVRLLAV True True DSVRLLAV 73.1575 436.7642 6902101.5 14800.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 2.3765733440717063 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14818 73.165 418.0 776420.0 25 0 50092.0 + 9607 FLLDKKIGV 9 231 516.8260458791663 1031.6375388251324 2 516.8260986208916 MULTI CID FTMS 0 0 0 14800 381412.15625 0.1579144514133027 3 -0.1921615600585937 18 Unmodified _FLLDKKIGV_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 47.594388314883695 0.0456443387682827 3 {M(Oxidation (M))|F}{I|L}{I|L}DKK{I|L}GV 9 0 + 53.452 0.0 0.0 5.1813 5.1813 83.014 0.0 0.0 0.0 20.08243322947724 6.285405258445955 6.285405258445955 7.597046968434135 0 1.1906140654642814 0.0 0.3494850021680094 0.2302046884880938 + + {M(Oxidation (M))|F}{I|L}{I|L}DKK{I|L}GV;{M(Oxidation (M))|F}{I|L}VEKK{I|L}GV;{M(Oxidation (M))|F}{I|L}{I|L}DK{[VA]|[{I|L}G]}KV;{M(Oxidation (M))|F}{I|L}{I|L}DKKAVV;{M(Oxidation (M))|F}{I|L}VEK{[VA]|[{I|L}G]}KV;{M(Oxidation (M))|F}{I|L}VEKKAVV;{NN|[MP]|[D{I|L}]|[EV]}KK{I|L}{M(Oxidation (M))|F}{I|L}R;{NN|[MP]|[D{I|L}]|[EV]}KK{I|L}{I|L}{M(Oxidation (M))|F}R;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KA][KA]{I|L}{I|L}E;{[QD]|[EN]|[WG]|[KD]|[RS]}VRV{M(Oxidation (M))|F}{I|L}R 5.1813;4.4449;4.1679;4.0251;3.4315;3.2887;2.9664;2.625;1.9063;1.33 +;-;-;-;-;-;-;-;-;- + 6075 + 1 1.131 245415.2 1.0 9249 5567 14800 HBL1_DMSO_200M_050219_1,14818 HBL1_DMSO_200M_050219_1,14818,FLLDKKIGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14819 73.174 516.0 193150.0 25 0 71876.0 -1 0 54 1170.7819175762638 3509.3239233289914 3 1171.449633777142 MULTI CID FTMS 0 0 0 14800 300302.8125 0.068837849528472 9 -0.3921432495117187 19 3 YV 2 -1 7.4743 0.0 0.0 0.21298 0.0 0.0 2175.690574795592 1068.5384396607292 3244.229014456321 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YV 0.21298 - 16 + 1 1.131 77072.5 1.0 9250 5567 14800 HBL1_DMSO_200M_050219_1,14819 HBL1_DMSO_200M_050219_1,14819, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14820 73.175 45.0 1201300.0 25 0 111010.0 -1 MIMMQQTV 8 88 507.2254889826521 1012.4364250321042 2 507.2527953982353 MULTI CID FTMS 0 0 0 14800 65627.1796875 0.159259216707284 3 -0.1921615600585937 20 2 Oxidation (M) _MIM(Oxidation (M))M(Oxidation (M))QQTV_ ENST00000370558.8_1_1:87208069-87208814:+|nuORF 15.768221252438446 0.6779680726941459 3 {[TV]|[{I|L}S]}N 3 -1 20.546 0.0 0.0 2.0294 0.0 0.0 0.0 695.2539048507167 695.2539048507167 8.327731244245342 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}N 2.0294 - 70 1 1.131 48141.4 1.0 9251 5567 14800 HBL1_DMSO_200M_050219_1,14820 HBL1_DMSO_200M_050219_1,14820,MIMMQQTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14822 73.18 5.3 25515000.0 25 0 2673000.0 + 22319 LPSHGVPLI 9 101 466.7819373338645 931.5493217345288 2 466.7819702029228 MULTI CID FTMS 0 0 0 14821 19413670.0 1.0 0 0.0 1 Unmodified _LPSHGVPLI_ ENSG00000089053|ENST00000261819|ANAPC5;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5 50.855029805455786 0.0384952370514206 3 [{I|L}P][HS]GVP{I|L}{I|L} 9 0 + 59.693 0.0 0.0 6.4079 6.4079 83.718 0.0 0.0 0.0 4.232712163289278 16.478174818886373 4.232712163289278 4.232712163289278 0 1.3494850021680094 2.0 0.2887254899964357 0.0 + + [{I|L}P][HS]GVP{I|L}{I|L};[HK]DP{I|L}P{I|L}{I|L};{[HG]|PP}VSP{I|L}P{I|L}{I|L};{[HG]|PP}SVP{I|L}P{I|L}{I|L};{[HG]|PP}SPV{I|L}P{I|L}{I|L};[{I|L}P][HS]GPV{I|L}{I|L};[HK]DPP{I|L}{I|L}{I|L};{[HG]|PP}VSPP{I|L}{I|L}{I|L};{[HG]|PP}SP{I|L}VP{I|L}{I|L};{[HG]|PP}SVPP{I|L}{I|L}{I|L} 6.4079;5.9536;5.7272;5.5081;5.3191;4.9149;4.7837;4.5574;4.4317;4.3383 +;-;-;-;-;-;-;-;-;- + 837 1 1.131 107265.8 1.0 9252 5568 14821 HBL1_DMSO_200M_050219_1,14822 HBL1_DMSO_200M_050219_1,14822,LPSHGVPLI True True LPSHGVPLI 73.179535 466.781970202923 212987424.0 14821.0 nc|ENSG00000089053|Q9UJX4-3|ANAPC5;;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;;ENSG00000089053|ENST00000261819|ANAPC5 2.307320694749554 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14823 73.181 13.0 2290700.0 25 0 541200.0 + 36674 TAYPQVVVV 9 52 488.2792661744117 974.5439794156234 2 488.2791015505791 MULTI CID FTMS 0 0 0 14821 8879757.0 1.0 0 0.0 2 Unmodified _TAYPQVVVV_ ENSG00000166532|ENST00000535829|RIMKLB;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;nc|ENSG00000166532|Q9ULI2-2|RIMKLB 20.453626601364224 0.2830276176381075 3 VV 2 7 17.959 0.0 0.0 1.8428 0.0 0.0 758.3961502914032 0.0 758.3961502914032 0.0 1.7609125905568137 0.0 0.0 0 0.0 0.0 0.0 0.0 + VV 1.8428 + + 21 + 1 1.131 33575.2 1.0 9253 5568 14821 HBL1_DMSO_200M_050219_1,14823 HBL1_DMSO_200M_050219_1,14823,TAYPQVVVV False True TAYPQVVVV 73.180714 488.279101550579 391433760.0 14821.0 ENSG00000166532|ENST00000535829|RIMKLB;;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;;nc|ENSG00000166532|Q9ULI2-2|RIMKLB 5.4797797203063965 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14824 73.182 32.0 789830.0 25 0 53327.0 + 41136 VPADLVKVKNA 11 66 577.348569859643 1152.682586786086 2 577.3488036990166 MULTI CID FTMS 0 0 0 14821 9763852.0 1.0 0 0.0 3 Unmodified _VPADLVKVKNA_ REV__ENSG00000105255|ENST00000221856|FSD1 2.9952420565917617 0.861016188266951 3 P 1 -1 9.6041 0.0 0.0 0.8332 0.0 0.0 1037.6219387531742 0.0 1037.6219387531742 0.0 9.515449934959715 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.8332 + + 8 + 1 1.131 23985.3 1.0 9254 5568 14821 HBL1_DMSO_200M_050219_1,14824 HBL1_DMSO_200M_050219_1,14824,VPADLVKVKNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14825 73.183 14.0 1355800.0 25 0 110690.0 40851 VLNVPHRER 9 46 560.3221297725755 1118.629706611951 2 560.3228027224541 MULTI CID FTMS 0 0 0 14821 5259397.5 1.0 0 0.0 4 Unmodified _VLNVPHRER_ ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF 1.844237919475145 0.850302753031785 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.131 21392.3 1.0 9255 5568 14821 HBL1_DMSO_200M_050219_1,14825 HBL1_DMSO_200M_050219_1,14825,VLNVPHRER False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14826 73.185 100.0 1461300.0 25 0 404700.0 -1 0 51 1162.797886063532 3485.371828790796 3 1163.463305652142 MULTI CID FTMS 0 0 0 14821 4133576.25 0.0355111327559745 9 -0.4253616333007812 5 3 GYW 3 -1 9.2082 0.0 0.0 0.2642 0.0 0.0 1943.6805877828133 1132.510885443961 3076.191473226774 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYW 0.2642 - 25 + 1 1.131 127653.3 1.0 9256 5568 14821 HBL1_DMSO_200M_050219_1,14826 HBL1_DMSO_200M_050219_1,14826, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14827 73.187 85.0 375550.0 25 0 33873.0 + 40829 VLNELPTRLI 10 68 584.356623307831 1166.698693682462 2 584.3567993044853 MULTI CID FTMS 0 0 0 14821 3864516.25 1.0 0 0.0 6 Unmodified _VLNELPTRLI_ REV__ENSG00000132153|ENST00000445061|DHX30;REV__nc|ENSG00000132153|Q7L2E3-2|DHX30;REV__nc|ENSG00000132153|Q7L2E3-3|DHX30 3.5964929083625545 0.7100006075494749 3 YE{M(Oxidation (M))|F}Q 4 -1 21.67 0.0 0.0 1.8574 0.0 0.0 227.2150033521869 369.2259615533813 596.4409649055682 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 YE{M(Oxidation (M))|F}Q 1.8574 - 20 + 1 1.131 29301.7 1.0 9257 5568 14821 HBL1_DMSO_200M_050219_1,14827 HBL1_DMSO_200M_050219_1,14827,VLNELPTRLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14828 73.19 121.0 135540.0 25 0 19128.0 + 43857 YFIVRILRR 9 46 618.3883397578257 0 618.3884155154228 PEAK CID FTMS 0 0 0 14821 2617005.75 1.0 0 0.0 7 Unmodified _YFIVRILRR_ REV__ENST00000430598.5_1_15:20668229-20711416:-|nuORF;REV__ENST00000529624.5_3_15:28874426-28877807:+|nuORF 0.6014990680409731 0.3444685223463735 3 V 1 -1 3.0989 0.0 0.0 0.25097 0.0 0.0 919.618402072489 213.0532625787719 1132.671664651261 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.25097 + + 1 + 1 1.131 18840.3 1.0 9258 5568 14821 HBL1_DMSO_200M_050219_1,14828 HBL1_DMSO_200M_050219_1,14828,YFIVRILRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14829 73.193 164.0 465130.0 25 0 45089.0 + 14025 IAGPGLPDL 9 99 426.7446979465881 851.4748429599762 2 426.7450744509697 MULTI CID FTMS 0 0 0 14821 1919483.25 1.0 0 0.0 8 Unmodified _IAGPGLPDL_ nc|ENSG00000284922|Q8WZ04-2|TOMT;nc|ENSG00000284922|Q8WZ04|TOMT 24.67388899826682 0.2172451872415813 3 [{I|L}A][NP]{I|L} 5 5 21.522 0.0 0.0 2.5276 0.0 0.0 0.0 340.1509958742918 340.1509958742918 1.0644695348171496 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}A][NP]{I|L} 2.5276 - 148 1 1.131 63556.9 1.0 9259 5568 14821 HBL1_DMSO_200M_050219_1,14829 HBL1_DMSO_200M_050219_1,14829,IAGPGLPDL False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14830 73.196 132.0 654460.0 25 0 41607.0 + + 10008 NVLHSAFEV 9 140 508.3407339055165 0 508.3407165408134 PEAK CID FTMS 0 0 0 14821 1492587.125 1.0 0 0.0 9 Unmodified _FPLKKKRV_ ENSG00000104522|ENST00000425753|GFUS;ENST00000531473.5_1_8:144696774-144698909:-|nuORF;ENST00000532308.5_1_8:144696774-144699659:-|nuORF 6.354104778181461 0.5763711549229614 3 E{M(Oxidation (M))|F}ASH 5 -1 14.17 0.0 0.0 1.3965 0.0 0.0 117.22655950849555 323.17160974674067 440.3981692552362 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 E{M(Oxidation (M))|F}ASH 1.3965 - 278 + 1 1.131 70963.8 1.0 9260 5568 14821 HBL1_DMSO_200M_050219_1,14830 HBL1_DMSO_200M_050219_1,14830,FPLKKKRV False False NVLHSAFEV 73.195589 508.340716540813 2966114.0 14821.0 ENSG00000104522|ENST00000425753|GFUS;;ENST00000531473.5_1_8:144696774-144698909:-|nuORF;;ENST00000532308.5_1_8:144696774-144699659:-|nuORF 6.241196950276692 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14831 73.197 66.0 1168500.0 25 0 39117.0 -1 LLMLDDQRLLL 11 112 679.8873050309804 1357.7600571287608 2 679.8879272341728 MULTI CID FTMS 0 0 0 14821 1431280.75 0.1442546897010966 -5 0.5204086303710938 10 Oxidation (M) _LLM(Oxidation (M))LDDQRLLL_ ENSG00000177628|ENST00000368373|GBA1;ENST00000459805.5_1_1:155184905-155186549:-|nuORF;ENST00000473223.5_1_1:155184463-155187072:-|nuORF;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;nc|ENSG00000177628|P04062-2|GBA1;nc|ENSG00000177628|P04062-3|GBA1;nc|ENSG00000177628|P04062-4|GBA1;nc|ENSG00000177628|P04062-5|GBA1 19.361941925380144 0.6323962752489956 3 VPYE{I|L}Q 6 -1 85.126 0.0 0.0 6.2696 0.0 0.0 0.0 625.3700045221311 625.3700045221311 12.3903984256213 0.0 0.0 0.0 0 2.1989700043360187 2.0 0.0 0.3494850021680094 VPYE{I|L}Q 6.2696 - 12711 + 1 1.131 60583.9 1.0 9261 5568 14821 HBL1_DMSO_200M_050219_1,14831 HBL1_DMSO_200M_050219_1,14831,LLMLDDQRLLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14832 73.198 30.0 3201700.0 25 0 328930.0 + 8913 FAHSILTV 8 114 444.25283103332026 886.4911091334405 2 444.2531310915947 MULTI CID FTMS 0 0 0 14821 1348574.0 0.3678859089764896 -4 0.3427581787109375 11 Unmodified _FAHSILTV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 49.66892048692302 0.1408045912742846 3 H{M(Oxidation (M))|F}S{I|L}{I|L}{[TV]|[{I|L}S]} 7 3 27.982 0.0 0.0 3.1564 0.0 0.0 71.0743885724625 0.0 71.0743885724625 0.0 7.21926046813401 0.0 0.0 0 0.5 0.0 1.174742501084005 0.0 H{M(Oxidation (M))|F}S{I|L}{I|L}{[TV]|[{I|L}S]} 3.1564 - 417 1 1.131 79190.0 1.0 9262 5568 14821 HBL1_DMSO_200M_050219_1,14832 HBL1_DMSO_200M_050219_1,14832,FAHSILTV False True FAHSILTV 73.198364 444.253131091595 46575232.0 14821.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 3.5189669132232666 2.0 True 8.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14833 73.2 57.0 1123300.0 25 0 151670.0 4839 DFKKRRGH 8 95 522.296337439604 1042.578121946008 2 522.2964355349541 MULTI CID FTMS 0 0 0 14821 1097814.375 0.2915782582092461 -5 0.5204086303710938 12 Unmodified _DFKKRRGH_ ENSG00000168010|ENST00000321297|ATG16L2;ENST00000542481.1_1_11:72534943-72536417:+|nuORF;nc|ENSG00000168010|Q8NAA4-2|ATG16L2 5.230669730166228 0.792582437072536 3 V 1 8 10.596 0.0 0.0 1.0163 0.0 0.0 925.4985072382916 0.0 925.4985072382916 0.0 0.5959320385960432 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0163 - 23 + 1 1.131 55891.9 1.0 9263 5568 14821 HBL1_DMSO_200M_050219_1,14833 HBL1_DMSO_200M_050219_1,14833,DFKKRRGH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14834 73.204 250.0 303380.0 25 0 50739.0 + 7874 ELLRLEWSL 9 118 579.8277563145451 0 579.8273803591728 PEAK CID FTMS 0 0 0 14821 1014167.75 1.0 0 0.0 13 Unmodified _ELLRLEWSL_ REV__ENST00000546244.5_1_12:49952290-49952407:-|nuORF 11.640296217721598 0.2934555500198502 3 E 1 -1 6.1945 0.0 0.0 0.5351 0.0 0.0 943.5093506644432 82.0670641534789 1025.5764148179223 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2215141619232908 0.0 E 0.5351 + + 21 + 1 1.131 63301.3 1.0 9264 5568 14821 HBL1_DMSO_200M_050219_1,14834 HBL1_DMSO_200M_050219_1,14834,ELLRLEWSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14835 73.209 251.0 250160.0 25 0 15727.0 + 31412 RPIKPVKQLC 10 115 591.3636353253906 0 591.3640014529228 PEAK CID FTMS 0 0 0 14821 1022687.375 1.0 0 0.0 14 Unmodified _RPIKPVKQLC_ REV__ENSG00000141052|ENST00000425538|MYOCD;REV__nc|ENSG00000141052|Q8IZQ8|MYOCD 3.944395688203298 0.3961065659209837 3 PD{M(Oxidation (M))|F}A 4 -1 14.412 0.0 0.0 1.2207 0.0 0.0 232.2430654732437 515.2640474908811 747.5071129641249 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PD{M(Oxidation (M))|F}A 1.2207 - 212 + 1 1.131 55156.0 1.0 9265 5568 14821 HBL1_DMSO_200M_050219_1,14835 HBL1_DMSO_200M_050219_1,14835,RPIKPVKQLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14836 73.212 148.0 961940.0 25 0 45227.0 + 22581 LPYAMKPIDY 10 120 605.8123403950291 1209.610127856858 2 605.8123657107353 MULTI CID FTMS 0 0 0 14821 942388.9375 0.714743560269037 -4 0.3427581787109375 15 Unmodified _LPYAMKPIDY_ ENSG00000147383|ENST00000370274|NSDHL 103.41943736471065 0.0068563894390004 3 {I|L}PYAMKP{I|L}DY 10 0 + 105.57 0.0 0.0 8.7275 8.7275 96.863 0.0 0.0 0.0 60.49668734638041 13.521825181113629 13.521825181113629 18.66570294682299 0 2.666386562212267 1.6989700043360187 1.156038390922711 0.0 + + {I|L}PYAMKP{I|L}DY;{I|L}PYAMK[{M(Oxidation (M))|F}V]{[QN]|[E{I|L}]|[KN]};{I|L}YPAMKP{I|L}DY;{I|L}PYAMK[YE][VP];{I|L}PYAM[R{I|L}]M{[ES]|[DT]|[{I|L}C]};{I|L}PYY[QT]{I|L}A{[QN]|[E{I|L}]|[KN]};{I|L}PYYG[TA]{I|L}A{[QN]|[E{I|L}]|[KN]};{I|L}PYY[QT]{I|L}P{[ES]|[DT]|[{I|L}C]};{I|L}YPAMK[{M(Oxidation (M))|F}V]{[QN]|[E{I|L}]|[KN]};{I|L}PYYG[TA]{I|L}P{[ES]|[DT]|[{I|L}C]} 8.7275;7.1844;7.1727;6.5833;5.8996;5.8326;5.7329;5.6492;5.6296;5.5495 +;-;-;-;-;-;-;-;-;- + 2438 + 1 1.131 106359.3 1.0 9266 5568 14821 HBL1_DMSO_200M_050219_1,14836 HBL1_DMSO_200M_050219_1,14836,LPYAMKPIDY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14837 73.218 298.0 161170.0 25 0 26959.0 37593 TLKISTIRSLS 11 85 609.8750649592665 1217.735576985333 2 609.8749877810478 MULTI CID FTMS 0 0 0 14821 798752.3125 1.0 0 0.0 16 Unmodified _TLKISTIRSLS_ ENST00000395949.2_1_11:31451062-31451945:+|nuORF;ENST00000524747.1_1_11:31451062-31451257:+|nuORF 5.731851221503515 0.8481046878870278 3 {I|L} 1 10 10.969 0.0 0.0 0.90078 0.0 0.0 1086.6407874118938 0.0 1086.6407874118938 0.0 0.3731680914845192 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.90078 + + 38 + 1 1.131 40022.0 1.0 9267 5568 14821 HBL1_DMSO_200M_050219_1,14837 HBL1_DMSO_200M_050219_1,14837,TLKISTIRSLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14838 73.221 190.0 392860.0 25 0 32713.0 + 21351 LPFKECSL 8 127 468.74544332658536 0 468.7454711794853 PEAK CID FTMS 0 0 0 14821 737595.625 1.0 0 0.0 17 Unmodified _LPFKECSL_ REV__ENST00000496359.5_1_10:81565841-81574436:-|nuORF 14.581692164780916 0.4900557725783909 3 G 1 -1 5.4846 0.0 0.0 0.58628 0.0 0.0 807.3808422422348 68.05144678287343 875.4322890251083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.58628 - 80 + 1 1.131 62205.8 1.0 9268 5568 14821 HBL1_DMSO_200M_050219_1,14838 HBL1_DMSO_200M_050219_1,14838,LPFKECSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14839 73.228 395.0 404800.0 25 0 50324.0 39391 VAKMAPAH 8 147 412.72646782187337 823.4383827105468 2 412.7265502810478 MULTI CID FTMS 0 0 0 14821 667935.875 1.0 0 0.0 18 Unmodified _VAKMAPAH_ ENST00000573417.1_1_17:19281327-19285138:+|nuORF 11.114462752807354 0.7467182956244686 3 [EP]W 3 7 26.033 0.0 0.0 3.1615 0.0 0.0 0.0 408.24350291001866 408.24350291001866 11.352180109601877 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.1595680409956017 0.0 [EP]W 3.1615 - 285 1 1.131 128676.6 1.0 9269 5568 14821 HBL1_DMSO_200M_050219_1,14839 HBL1_DMSO_200M_050219_1,14839,VAKMAPAH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14840 73.232 199.0 946680.0 25 0 86334.0 30262 QYHLIFFV 8 173 533.7891417573512 1065.5637305815023 2 533.7903930544853 MULTI CID FTMS 0 0 0 14821 546530.1875 0.0914802583869079 -10 0.9323501586914062 19 Unmodified _QYHLIFFV_ L1ME3E_dup115|chr1:53338288-53339127:+|1.047794229009607|0.187334311150075|2.48|48.0|52|3|anti-sense 28.17323086031832 0.4514957916281387 3 QYP 3 6 46.075 0.0 0.0 4.324 0.0 0.0 0.0 674.363379703881 674.363379703881 23.48996967481709 0.0 0.0 0.0 0 0.4392404878284264 2.0 0.0 0.0 QYP 4.324 - 1679 + 1 1.131 151471.1 1.0 9270 5568 14821 HBL1_DMSO_200M_050219_1,14840 HBL1_DMSO_200M_050219_1,14840,QYHLIFFV False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 14841 73.24 377.0 314410.0 25 0 23812.0 + 45103 YPYPYPHTLY 10 144 657.3137392995932 1312.6129256659865 2 657.3138305544853 MULTI CID FTMS 0 0 0 14821 533498.875 0.2043539843652592 5 -0.2559432983398437 20 Unmodified _YPYPYPHTLY_ ENSG00000116221|ENST00000360840|MRPL37 97.07464715276576 0.0088266272690559 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}Y{M(Oxidation (M))|F}[Y{I|L}] 10 5 + 63.852 0.0 0.0 4.8645 4.8645 77.231 0.0 0.0 0.0 10.82184719706136 17.21578876385378 10.82184719706136 3.061799739838875 0 1.2887254899964358 1.6989700043360187 1.6861818737241734 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}Y{M(Oxidation (M))|F}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PHT{I|L}Y{M(Oxidation (M))|F}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}YE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPG{I|L}{M(Oxidation (M))|F}Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPG{I|L}Y{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPHT[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PHT{I|L}YE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}YYPY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPGY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}EY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 4.8645;4.6312;4.6271;4.6198;4.6198;4.4933;4.3938;4.2777;4.2559;4.2029 -;-;-;-;-;+;-;-;-;- + 3712 1 1.131 89885.9 1.0 9271 5568 14821 HBL1_DMSO_200M_050219_1,14841 HBL1_DMSO_200M_050219_1,14841,YPYPYPHTLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14843 73.248 324.0 210710.0 25 0 15294.0 -1 IFLLILMLLS 10 133 596.3752319216728 0 596.3752319216728 PEAK CID FTMS 0 0 0 -1 0 1 Oxidation (M) _IFLLILM(Oxidation (M))LLS_ ENST00000508517.1_1_5:114938829-114955926:+|nuORF 3.944395688203298 0.3961065659209837 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.58701 0.0 0.0 958.5783314197143 82.06698023013905 1040.6453116498533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.58701 + + 38 + 1 1.131 58597.2 1.0 9272 5569 14842 HBL1_DMSO_200M_050219_1,14843 HBL1_DMSO_200M_050219_1,14843,IFLLILMLLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14844 73.253 286.0 446440.0 25 0 23271.0 + 24800 MPIYPTYNEV 10 141 613.79159495609 1225.5686369789798 2 613.7916137576103 MULTI CID FTMS 0 0 0 14842 633680.0 0.5390439026921465 -4 0.3553390502929687 2 Unmodified _MPIYPTYNEV_ ENSG00000124201|ENST00000396105|ZNFX1;nc|ENSG00000124201|Q9P2E3-2|ZNFX1 37.97399986684836 0.1789611706409123 3 [{I|L}P]MYPTYNEV 10 2 + 60.067 0.0 0.0 4.9012 4.9012 79.284 0.0 0.0 0.0 13.83442021927616 10.012262311882758 10.012262311882758 4.771212547196619 0 0.4802046884880938 1.5228787452803376 0.805462187404089 0.0 [{I|L}P]MYPTYNEV;[{I|L}P]YMPTYNEV;[{I|L}P]MYPTYGGEV;[{M(Oxidation (M))|F}V]NYTPY[HS]V;[{I|L}P]YMPTYGGEV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}YPTYNEV;[{I|L}P]Y[TP]MYNEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PYPTYNEV;{[VA]|[{I|L}G]}[NG]YPTYNEV;[{M(Oxidation (M))|F}V]GGYTPY[HS]V 4.9012;4.5119;4.1534;3.7724;3.7641;3.6313;3.4653;3.3814;3.0309;3.0246 -;-;-;-;-;+;-;-;-;- + 1152 1 1.131 99259.3 1.0 9273 5569 14842 HBL1_DMSO_200M_050219_1,14844 HBL1_DMSO_200M_050219_1,14844,MPIYPTYNEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14845 73.254 54.0 1137700.0 25 0 84502.0 15321 IPLLPMALV 9 96 483.8086187667497 965.6026846002992 2 483.8087036013603 MULTI CID FTMS 0 0 0 14842 616012.5 0.5040772867363161 -4 0.3553390502929687 3 Unmodified _IPLLPMALV_ ENSG00000025770|ENST00000420993|NCAPH2;ENST00000418794.1_1_22:50954176-50956482:+|nuORF;nc|ENSG00000025770|Q6IBW4-2|NCAPH2;nc|ENSG00000025770|Q6IBW4-4|NCAPH2;nc|ENSG00000025770|Q6IBW4-5|NCAPH2 36.46614268402704 0.0948557732959553 3 {I|L}P{I|L}ANTP 7 6 73.008 0.0 0.0 7.5608 0.0 0.0 0.0 256.16694055728755 256.16694055728755 56.80986665817912 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 {I|L}P{I|L}ANTP 7.5608 - 466 + 1 1.131 55592.1 1.0 9274 5569 14842 HBL1_DMSO_200M_050219_1,14845 HBL1_DMSO_200M_050219_1,14845,IPLLPMALV True False LPIANVARI 73.254434 483.80870360136 19740642.0 14842.0 ENSG00000120837|ENST00000240055|NFYB 3.5177884896596274 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14846 73.26 296.0 392720.0 25 0 19841.0 -1 0 113 864.9375906741906 1727.860628415181 2 865.4383422732353 MULTI CID FTMS 0 0 0 14842 571837.75 0.9404624827647738 -3 0.2555160522460937 4 3 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ 9 -1 69.816 0.0 0.0 4.0406 0.0 0.0 0.0 731.3469389898231 731.3469389898231 42.86098023303616 0.0 0.0 0.0 0 1.548455006504028 2.0 0.3494850021680094 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ 4.0406 - 343 + 1 1.131 79245.4 1.0 9275 5569 14842 HBL1_DMSO_200M_050219_1,14846 HBL1_DMSO_200M_050219_1,14846, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14847 73.266 318.0 335140.0 25 0 52976.0 25733 NILRLVAYCL 10 141 589.3431600764832 1176.6717672197665 2 589.3434936404228 MULTI CID FTMS 0 0 0 14842 538686.8125 0.4105381891503654 -4 0.3553390502929687 5 Unmodified _NILRLVAYCL_ ENSG00000115661|ENST00000396738|STK16;ENST00000461417.5_1_2:220110721-220111658:+|nuORF;ENST00000475342.5_1_2:220110721-220112169:+|nuORF;ENST00000475696.5_1_2:220110721-220112662:+|nuORF;ENST00000496443.5_1_2:220111358-220112169:+|nuORF;ENST00000496800.5_1_2:220110721-220112335:+|nuORF 4.3292370932331545 0.7066112369704343 3 M 1 10 10.181 0.0 0.0 0.86524 0.0 0.0 1027.6203278660537 0.0 1027.6203278660537 0.0 0.0924170284700665 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.86524 - 54 + 1 1.131 83203.1 1.0 9276 5569 14842 HBL1_DMSO_200M_050219_1,14847 HBL1_DMSO_200M_050219_1,14847,NILRLVAYCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14848 73.269 181.0 1142400.0 25 0 106420.0 + 18783 LAPIGIRV 8 121 419.7792814925942 837.5440100519884 2 419.7791015505791 MULTI CID FTMS 0 0 0 14842 520753.1875 0.3051276214466051 -4 0.3553390502929687 6 Unmodified _LAPIGIRV_ ENSG00000072506|ENST00000168216|HSD17B10 30.22481116460888 0.4082965392918993 3 [{I|L}A]P{I|L}VARV 8 2 + 47.658 0.0 0.0 5.6902 5.6902 81.99 0.0 0.0 0.0 24.981728475026443 2.6440110030181927 2.6440110030181927 4.771212547196619 0 0.6139829889124311 1.5228787452803376 0.0 0.0 [{I|L}A]P{I|L}VARV;[{I|L}A]PV{I|L}ARV;[{I|L}A]P{I|L}V{[NV]|[RG]}{I|L};[{I|L}A]P{I|L}G{I|L}RV;[{I|L}A]VP{I|L}ARV;[{I|L}A]PV{I|L}{[NV]|[RG]}{I|L};[{I|L}A]PVA{I|L}RV;[{I|L}A]P{I|L}G[RV]{I|L};[{I|L}A]VP{I|L}{[NV]|[RG]}{I|L};[{I|L}A]VPA{I|L}RV 5.6902;5.1205;4.8659;4.5508;4.4164;4.2962;3.9812;3.7266;3.5921;3.277 -;-;-;+;-;-;-;-;-;- + 111 + 1 1.131 162213.1 1.0 9277 5569 14842 HBL1_DMSO_200M_050219_1,14848 HBL1_DMSO_200M_050219_1,14848,LAPIGIRV False True LAPIGIRV 73.26918 419.779101550579 16391853.0 14842.0 ENSG00000072506|ENST00000168216|HSD17B10 1.87380584081014 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14849 73.277 435.0 159040.0 25 0 21716.0 -1 0 53 1114.4415324797253 3340.302768039376 3 1114.772387683392 MULTI CID FTMS 0 0 0 14842 233714.859375 0.6475422078310014 3 -0.1859130859375 7 3 T 1 -1 6.9897 0.0 0.0 0.20925 0.0 0.0 2434.86564753332 801.3445528619749 3236.210200395295 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.20925 - 37 + 1 1.131 60621.5 1.0 9278 5569 14842 HBL1_DMSO_200M_050219_1,14849 HBL1_DMSO_200M_050219_1,14849, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14850 73.288 657.0 309290.0 25 0 36583.0 + 10818 FYYDGKVMKL 10 164 421.88613419811855 1262.6365731945557 3 422.2196533083916 MULTI CID FTMS 0 0 0 14842 239588.734375 0.5034684362614135 -3 0.2555160522460937 8 Unmodified _FYYDGKVMKL_ ENSG00000198900|ENST00000361337|TOP1 40.72490554402381 0.149912226101682 3 [Y{M(Oxidation (M))|F}]YD[KG]VMK{I|L} 10 0 + 36.462 0.0 0.0 2.8878 2.8878 79.931 0.0 0.0 0.0 7.269987279362624 10.881360887005512 7.269987279362624 10.881360887005512 0 0.3252574989159953 0.0 0.3252574989159953 0.555462187404089 + + [Y{M(Oxidation (M))|F}]YD[KG]VMK{I|L};[Y{M(Oxidation (M))|F}]YD[KG]VM{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}Y[RK]DY[YE];{[QV]|[N{I|L}]|[RA]|[KV]}{[HG]|PP}[RP]DY[YE];{[HG]|PP}{[QV]|[N{I|L}]|[RA]|[KV]}[RP]DY[YE];{[HG]|PP}[VP][RK]DY[YE];[KG][HV]T[PG]{I|L}Y[YE];{[QV]|[N{I|L}]|[RA]|[KV]}{[HG]|PP}T[PG]{I|L}Y[YE];[Y{M(Oxidation (M))|F}]Y{I|L}[PG][YN]KV;{[HG]|PP}{[QV]|[N{I|L}]|[RA]|[KV]}T[PG]{I|L}Y[YE] 2.8878;2.026;1.6397;1.0261;0.86447;0.74874;0.47541;0.39866;0.3826;0.23699 +;-;-;-;-;-;-;-;-;- + 808 + 1 1.131 168448.3 1.0 9279 5569 14842 HBL1_DMSO_200M_050219_1,14850 HBL1_DMSO_200M_050219_1,14850,FYYDGKVMKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14851 73.298 542.0 355980.0 25 0 27422.0 + 9099 FFKDGLEM 8 228 493.7361604607742 985.4577679883485 2 493.7362243533134 MULTI CID FTMS 0 0 0 14842 231428.671875 0.5227095470477713 1 -0.070556640625 9 Unmodified _FFKDGLEM_ ENSG00000133112|ENST00000530705|TPT1;nc|ENSG00000133112|P13693-2|TPT1 30.22481116460888 0.4082965392918993 3 [{I|L}T]QA{M(Oxidation (M))|F}{M(Oxidation (M))|F}EM 8 6 + 31.699 0.0 0.0 3.2166 3.2166 68.511 0.0 0.0 0.0 3.42220264646884 0.7133375178436552 0.7133375178436552 0.7133375178436552 0 0.5484550065040282 1.5228787452803376 0.6705363776671327 0.0 [{I|L}T]QA{M(Oxidation (M))|F}{M(Oxidation (M))|F}EM;[{I|L}T]QA{M(Oxidation (M))|F}M[{M(Oxidation (M))|F}E];{NN|[MP]|[D{I|L}]|[EV]}GK{M(Oxidation (M))|F}{M(Oxidation (M))|F}EM;{NN|[MP]|[D{I|L}]|[EV]}GK{M(Oxidation (M))|F}M[{M(Oxidation (M))|F}E];[VG]EK{M(Oxidation (M))|F}{M(Oxidation (M))|F}EM;[VG]EK{M(Oxidation (M))|F}M[{M(Oxidation (M))|F}E];{[VA]|[{I|L}G]}DK{M(Oxidation (M))|F}{M(Oxidation (M))|F}EM;{[VA]|[{I|L}G]}DK{M(Oxidation (M))|F}M[{M(Oxidation (M))|F}E];[QT]{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}EM;[QT]{I|L}A{M(Oxidation (M))|F}M[{M(Oxidation (M))|F}E] 3.2166;3.1443;2.8694;2.797;2.7575;2.6852;2.6384;2.566;2.4049;2.3325 -;-;-;-;-;-;-;-;-;- 4270 1 1.131 145410.5 1.0 9280 5569 14842 HBL1_DMSO_200M_050219_1,14851 HBL1_DMSO_200M_050219_1,14851,FFKDGLEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14852 73.311 732.0 258930.0 25 0 28197.0 + 33689 SIYREFERL 9 161 404.8840870636794 1211.6304317912384 3 404.8839599490166 MULTI CID FTMS 0 0 0 14842 209693.671875 0.3677855184028208 1 -0.070556640625 10 Unmodified _SIYREFERL_ ENSG00000008294|ENST00000262013|SPAG9;ENSG00000138834|ENST00000610761|MAPK8IP3;nc|ENSG00000008294|O60271-2|SPAG9;nc|ENSG00000008294|O60271-3|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-5|SPAG9;nc|ENSG00000138834|Q9UPT6-2|MAPK8IP3;nc|ENSG00000138834|Q9UPT6|MAPK8IP3 28.23362336080872 0.1719529537093671 3 S{I|L}YR{I|L}N 6 5 63.215 0.0 0.0 5.2173 0.0 0.0 0.0 462.20908533267817 462.20908533267817 48.398531927796384 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 S{I|L}YR{I|L}N 5.2173 - 472 + 1 1.131 151118.5 1.0 9281 5569 14842 HBL1_DMSO_200M_050219_1,14852 HBL1_DMSO_200M_050219_1,14852,SIYREFERL False True SIYREFERL 73.310571 404.883959949017 2854878.0 14842.0 nc|ENSG00000008294|O60271-4|SPAG9;;nc|ENSG00000008294|O60271-3|SPAG9;;ENSG00000138834|ENST00000610761|MAPK8IP3;;nc|ENSG00000138834|Q9UPT6|MAPK8IP3;;ENSG00000008294|ENST00000262013|SPAG9;;nc|ENSG00000008294|O60271-5|SPAG9;;nc|ENSG00000008294|O60271-2|SPAG9;;nc|ENSG00000138834|Q9UPT6-2|MAPK8IP3 4.096509536107381 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14854 73.315 5.4 7207200.0 25 0 587970.0 + 41560 VPPEILNNV 9 72 497.7822691072368 993.5499852812736 2 497.7822448611259 MULTI CID FTMS 0 0 0 14853 9010438.0 0.6401961846588456 -3 0.1921615600585937 1 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 37.97399986684836 0.0865783450051559 3 [EP]{I|L}PV{I|L}NNV 9 4 + 47.611 0.0 0.0 4.792 4.792 72.474 0.0 0.0 0.0 0.5115252244738144 7.632192780232785 0.5115252244738144 0.5115252244738144 0 0.8737125054200234 0.0 0.0 0.0 [EP]{I|L}PV{I|L}NNV;[VP][EP]{I|L}{I|L}NNV;[EP]{I|L}P{I|L}VNNV;[EP]P{I|L}V{I|L}NNV;[EP]P{I|L}{I|L}VNNV;[EP]PV{I|L}{I|L}NNV;[EP]{I|L}PV{I|L}GGNV;[EP]{I|L}PVQVNV;[VP][EP]{I|L}{I|L}GGNV;[VP][EP]{I|L}QVNV 4.792;4.7405;4.489;4.489;4.186;4.0088;3.8652;3.8343;3.8137;3.7828 -;+;-;-;-;-;-;-;-;- + 316 1 1.128 35325.9 1.0 9282 5570 14853 HBL1_DMSO_200M_050219_1,14854 HBL1_DMSO_200M_050219_1,14854,VPPEILNNV True True VPPEILNNV 73.314686 497.782244861126 1087932544.0 14853.0 ENSG00000198730|ENST00000361367|CTR9 6.126716454823812 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14855 73.316 5.3 10776000.0 25 0 2672500.0 + 42265 VSPKKRQG 8 69 450.2748616592415 898.535170385283 2 450.2748596072197 MULTI CID FTMS 0 0 0 14853 10896281.0 0.7044545906161517 -3 0.1921615600585937 2 Unmodified _VSPKKRQG_ REV__ENST00000427025.6_2_6:138893064-138893121:-|nuORF 0.6903765706972694 0.8201419426409876 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.128 49857.4 1.0 9283 5570 14853 HBL1_DMSO_200M_050219_1,14855 HBL1_DMSO_200M_050219_1,14855,VSPKKRQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14856 73.317 11.0 10618000.0 25 0 1044000.0 + 26288 NQVALPNI 8 113 434.7481829402984 867.4818129473967 2 434.7480346560478 MULTI CID FTMS 0 0 0 14853 4958759.0 0.4308507800611439 -3 0.1921615600585937 3 Unmodified _NQVALPNI_ ENSG00000188596|ENST00000524981|CFAP54;ENST00000342887.1_1_12:97043703-97159031:+|nuORF;nc|ENSG00000188596|Q96N23-2|CFAP54 70.71552829651908 0.111000043122623 3 [QA]VN{I|L}PN{I|L} 8 2 [QA]VN + + 34.385 8.5443 2.0728 3.9638 3.9638 52.433 0.0 0.0 0.0 0.0 18.443102041839254 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.6694451763165201 [QA]VN{I|L}PN{I|L} 3.9638 - 497 + 1 1.128 92399.9 1.0 9284 5570 14853 HBL1_DMSO_200M_050219_1,14856 HBL1_DMSO_200M_050219_1,14856,NQVALPNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14857 73.318 11.0 3340200.0 25 0 420390.0 -1 YIPNISMCL 9 67 563.7672980737359 1125.5200432142717 2 563.7674438357353 MULTI CID FTMS 0 0 0 14853 3760105.5 0.8186749986283224 1 -0.0873870849609375 4 Carbamidomethyl (C),Oxidation (M) _YIPNISM(Oxidation (M))C(Carbamidomethyl (C))L_ ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF 12.531546534597751 0.4974689918368763 3 [VP]VY{I|L} 5 -1 21.26 0.0 0.0 1.8889 0.0 0.0 0.0 551.1619248883529 551.1619248883529 2.926740567922433 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [VP]VY{I|L} 1.8889 - 123 1 1.128 35102.9 1.0 9285 5570 14853 HBL1_DMSO_200M_050219_1,14857 HBL1_DMSO_200M_050219_1,14857,YIPNISMCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14858 73.319 26.0 1589600.0 25 0 161610.0 + 42796 VVITEKGISDL 11 71 587.3404189105876 1172.666284887975 2 587.3402587771416 MULTI CID FTMS 0 0 0 14853 1168986.625 0.1408526144875861 -4 0.3260726928710937 5 Unmodified _VVITEKGISDL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 14.40537977576856 0.7354982482299568 3 VV{I|L}VV{I|L}SY 8 6 46.419 0.0 0.0 3.9585 0.0 0.0 0.0 297.0995272272094 297.0995272272094 22.474702404264026 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8807196863200843 0.0 VV{I|L}VV{I|L}SY 3.9585 - 207 + 1 1.128 38480.7 1.0 9286 5570 14853 HBL1_DMSO_200M_050219_1,14858 HBL1_DMSO_200M_050219_1,14858,VVITEKGISDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14859 73.321 44.0 2300200.0 25 0 443090.0 + 16283 IVWQEDPRL 9 97 578.3123866595781 1154.6102203859562 2 578.3118163943291 MULTI CID FTMS 0 0 0 14853 1069229.125 0.2752628241706202 -2 0.1351547241210937 6 Unmodified _IVWQEDPRL_ ENSG00000198000|ENST00000442668|NOL8;ENST00000463593.6_1_9:95061133-95062278:-|nuORF;ENST00000544867.5_1_9:95060120-95062368:-|nuORF;nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8 49.93300154707207 0.0405168250806675 3 [{I|L}V]WQED{I|L}[RP] 9 2 + 70.824 0.0 0.0 6.1341 6.1341 88.156 0.0 0.0 0.0 58.18758762624413 3.9904371307691378 3.9904371307691378 9.208187539523747 0 0.6421590589602533 1.6989700043360187 0.3252574989159953 1.1307196863200843 [{I|L}V]WQED{I|L}[RP];[{I|L}V]W[AG]ED{I|L}[RP];[{I|L}V]WQED[RP]{I|L};[{I|L}V]W[AG]ED[RP]{I|L};[{I|L}V]WQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[HV]{I|L};[{I|L}V]W{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HN][RP] 6.1341;5.3365;5.3076;4.5101;3.5787;2.8441 -;-;+;-;-;- + 479 + 1 1.128 78731.9 1.0 9287 5570 14853 HBL1_DMSO_200M_050219_1,14859 HBL1_DMSO_200M_050219_1,14859,IVWQEDPRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14860 73.322 40.0 2029200.0 25 0 222590.0 + 45619 YVLEGLKSV 9 100 504.2942678287795 1006.573982724359 2 504.2939941287041 MULTI CID FTMS 0 0 0 14853 1019023.125 0.6590933290386519 -2 0.1351547241210937 7 Unmodified _YVLEGLKSV_ ENSG00000107938|ENST00000356792|EDRF1;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;ENST00000525091.5_1_10:127408310-127436620:+|nuORF;nc|ENSG00000107938|Q3B7T1-3|EDRF1;nc|ENSG00000107938|Q3B7T1-5|EDRF1 34.40172386719151 0.1061884637610825 3 [YV]{I|L}E{[VA]|[{I|L}G]}KSV 9 0 + 55.437 0.0 0.0 5.5075 5.5075 83.212 0.0 0.0 0.0 23.961793658102508 12.460823534140276 12.460823534140276 6.478174818886373 0 0.4247425010840047 2.0 0.9517188504113844 0.0 + + [YV]{I|L}E{[VA]|[{I|L}G]}KSV;[YV]{I|L}[W{I|L}]KSV;[YV]{I|L}E[RK]TV;[YV]{I|L}E[RK]S{I|L};{[QN]|[E{I|L}]|[KN]}G{I|L}KSVYV;[YV]{I|L}KWW{I|L};{[VA]|[{I|L}G]}E{I|L}KSVYV;{[QN]|[E{I|L}]|[KN]}G{I|L}{[HG]|PP}{I|L}[R{I|L}];{[VA]|[{I|L}G]}KNKSVYV;[YV]{I|L}[PA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AV 5.5075;4.8639;4.142;3.689;2.7686;2.75;2.5932;2.395;2.3728;2.3214 +;-;-;-;-;-;-;-;-;- + 742 + 1 1.128 66962.9 1.0 9288 5570 14853 HBL1_DMSO_200M_050219_1,14860 HBL1_DMSO_200M_050219_1,14860,YVLEGLKSV True True YVLEGLKSV 73.321809 504.293994128704 8859693.0 14853.0 ENSG00000107938|ENST00000356792|EDRF1;;nc|ENSG00000107938|Q3B7T1-3|EDRF1;;ENST00000525091.5_1_10:127408310-127436620:+|nuORF;;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;;nc|ENSG00000107938|Q3B7T1-5|EDRF1 4.777365525563558 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14861 73.327 252.0 845930.0 25 0 32636.0 -1 0 170 959.113545178762 2874.318806136486 3 959.449267566204 MULTI CID FTMS 0 0 0 14853 819176.1875 0.2531010569794406 2 -0.1153564453125 8 3 QSAD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6 -1 49.302 0.0 0.0 1.7153 0.0 0.0 2211.0518654273874 0.0 2211.0518654273874 0.0 3.708515755985786 0.0 0.0 0 0.0 0.0 1.1861818737241734 1.5044321917401078 QSAD{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.7153 - 32335 1 1.128 140330.1 1.0 9289 5570 14853 HBL1_DMSO_200M_050219_1,14861 HBL1_DMSO_200M_050219_1,14861, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14862 73.328 53.0 1122900.0 25 0 134490.0 14505 IGPAEAHSDSL 11 97 548.7655354503339 1095.5165179674675 2 549.2675048708916 MULTI CID FTMS 0 0 0 14853 770472.25 0.9022038190474616 -6 0.4779129028320312 9 Unmodified _IGPAEAHSDSL_ ENSG00000136643|ENST00000366960|RPS6KC1;nc|ENSG00000136643|Q96S38-2|RPS6KC1 18.1463463914782 0.6576820063886638 3 [PA]E{M(Oxidation (M))|F}E 5 8 18.766 0.0 0.0 1.7129 0.0 0.0 0.0 519.2481823563927 519.2481823563927 6.291266954582273 0.0 0.0 0.0 0 0.4247425010840047 0.7695510786217261 0.0 0.0 [PA]E{M(Oxidation (M))|F}E 1.7129 - 159 1 1.128 52939.8 1.0 9290 5570 14853 HBL1_DMSO_200M_050219_1,14862 HBL1_DMSO_200M_050219_1,14862,IGPAEAHSDSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14863 73.33 96.0 331980.0 25 0 30278.0 + 11787 GLLLTRHRNA 10 74 575.8429688153368 1149.6713846974735 2 575.8433105349541 MULTI CID FTMS 0 0 0 14853 720797.125 0.2006783431135878 2 -0.1153564453125 10 Unmodified _GLLLTRHRNA_ REV__ENST00000526387.5_1_11:67177262-67177541:+|nuORF 3.5964929083625545 0.7100006075494749 3 [YT][{M(Oxidation (M))|F}E]Y{I|L} 6 -1 13.778 0.0 0.0 1.1984 0.0 0.0 0.0 330.28000221139854 330.28000221139854 4.380545644219806 0.0 0.0 0.0 0 0.0 1.154901959985743 0.7614393726401688 0.0 [YT][{M(Oxidation (M))|F}E]Y{I|L} 1.1984 - 48 1 1.128 28409.9 1.0 9291 5570 14853 HBL1_DMSO_200M_050219_1,14863 HBL1_DMSO_200M_050219_1,14863,GLLLTRHRNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14864 73.336 313.0 451500.0 25 0 23954.0 + 43378 WQDYIYKEV 9 150 622.3031835666543 1242.5918142001085 2 622.3029052615166 MULTI CID FTMS 0 0 0 14853 421987.65625 0.8250147714589081 1 -0.0873870849609375 11 Unmodified _WQDYIYKEV_ ENSG00000152147|ENST00000281950|GEMIN6 28.49450938151212 0.1686335738423394 3 {NN|[MP]|[D{I|L}]|[EV]}E{I|L}KQSDE 9 8 29.096 0.0 0.0 2.3415 0.0 0.0 0.0 182.0546797609085 182.0546797609085 7.193029898625831 0.0 0.0 0.0 0 0.6307196863200843 0.5686362358410126 1.113982988912431 0.0 {NN|[MP]|[D{I|L}]|[EV]}E{I|L}KQSDE 2.3415 - 2646 1 1.128 108571.4 1.0 9292 5570 14853 HBL1_DMSO_200M_050219_1,14864 HBL1_DMSO_200M_050219_1,14864,WQDYIYKEV False True WQDYIYKEV 73.335721 622.302905261517 4201719.5 14853.0 ENSG00000152147|ENST00000281950|GEMIN6 3.436843713124593 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14865 73.342 324.0 516100.0 25 0 22080.0 -1 0 143 857.9294110897305 1713.8442692462609 2 858.4307739138603 MULTI CID FTMS 0 0 0 14853 437440.25 0.404646110611594 2 -0.1153564453125 12 3 {[QV]|[N{I|L}]|[RA]|[KV]}P[TP][DP]QWNPMP[HA] 15 -1 + 54.141 0.0 0.0 3.159 3.159 68.592 0.0 0.0 0.0 0.6148170849337333 16.929066783389928 0.6148170849337333 0.8267100756331232 0 0.2396518287104437 2.0 1.337180496500464 0.7614393726401688 {[QV]|[N{I|L}]|[RA]|[KV]}P[TP][DP]QWNPMP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[HT]DANPMP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[HT]WNPMP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PVV{[MS]|[{M(Oxidation (M))|F}A]}V[YC(Carbamidomethyl (C))]PMP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PVV[PG]Y[YC(Carbamidomethyl (C))]PMP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PVVT{[ES]|[DT]|[{I|L}C]}[YC(Carbamidomethyl (C))]PMP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PV{[MS]|[{M(Oxidation (M))|F}A]}VV[YC(Carbamidomethyl (C))]PMP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PV[PG]VY[YC(Carbamidomethyl (C))]PMP[HA];[NP]{I|L}VV{[MS]|[{M(Oxidation (M))|F}A]}V[YC(Carbamidomethyl (C))]PMP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PV[RP]Y[YC(Carbamidomethyl (C))]PMP[HA] 3.159;3.1108;2.8961;2.6211;2.5645;2.5347;2.4369;2.3889;2.3725;2.3498 -;-;-;-;-;-;-;-;-;- 11793 1 1.128 112703.6 1.0 9293 5570 14853 HBL1_DMSO_200M_050219_1,14865 HBL1_DMSO_200M_050219_1,14865, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14866 73.348 358.0 636450.0 25 0 129100.0 -1 0 119 953.1112274261563 2856.311852878669 3 953.778369128704 MULTI CID FTMS 0 0 0 14853 317417.6875 0.8744142875024298 1 -0.0873870849609375 13 3 [MN][TA]VVST{I|L} 9 -1 41.753 0.0 0.0 1.4618 0.0 0.0 0.0 1936.8106941726307 1936.8106941726307 28.841945390309785 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.3829131673969606 0.0 [MN][TA]VVST{I|L} 1.4618 - 3718 1 1.128 155575.1 1.0 9294 5570 14853 HBL1_DMSO_200M_050219_1,14866 HBL1_DMSO_200M_050219_1,14866, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14867 73.357 512.0 728120.0 25 0 75011.0 + 1264 AILPHLRSL 9 203 340.5502628792009 1018.6289592378027 3 340.5500366091728 MULTI CID FTMS 0 0 0 14853 304608.8125 0.2756856021567294 2 -0.1153564453125 14 Unmodified _AILPHLRSL_ ENSG00000115524|ENST00000335508|SF3B1 29.43715596616401 0.1566398223704148 3 [{I|L}A]{I|L}PH{I|L}RS{I|L} 9 0 + 51.325 0.0 0.0 5.0386 5.0386 77.445 0.0 0.0 0.0 42.965217694548784 4.079501791295336 4.079501791295336 3.0102999566398125 0 0.3054621874040891 2.0 0.7742275032520141 0.6307196863200843 + + [{I|L}A]{I|L}PH{I|L}RS{I|L};[{I|L}A]{I|L}P{I|L}HRS{I|L};[{I|L}A]{I|L}{I|L}PHRS{I|L} 5.0386;4.7431;3.9748 +;-;- + 127 + 1 1.128 303955.7 1.0 9295 5570 14853 HBL1_DMSO_200M_050219_1,14867 HBL1_DMSO_200M_050219_1,14867,AILPHLRSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14868 73.364 389.0 61363.0 25 0 8562.7 -1 0 38 1035.442065417767 0 1035.442065417767 PEAK CID FTMS 0 0 0 -1 0 15 3 {M(Oxidation (M))|F}QQPP 5 -1 23.544 0.0 0.0 1.138 0.0 0.0 1017.3806385486216 451.1954744928344 1468.5761130414562 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}QQPP 1.138 - 99 + 1 1.128 27945.4 1.0 9296 5570 14853 HBL1_DMSO_200M_050219_1,14868 HBL1_DMSO_200M_050219_1,14868, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14869 73.367 124.0 942670.0 25 0 155330.0 + 1017 AGAELLLKVV 10 148 506.8241964283972 1011.6338399235945 2 506.8242980837822 MULTI CID FTMS 0 0 0 14853 256707.140625 0.1693616034376744 -3 0.1921615600585937 16 Unmodified _AGAELLLKVV_ REV__ENSG00000165138|ENST00000353234|ANKS6;REV__nc|ENSG00000165138|Q68DC2-3|ANKS6;REV__nc|ENSG00000165138|Q68DC2-4|ANKS6 30.63653989081413 0.2803493085145199 3 {I|L}{I|L}AQE{I|L}VKV 9 -1 + 81.014 0.0 0.0 8.0082 8.0082 93.178 0.0 0.0 0.0 44.47713452366178 12.983324797206263 12.983324797206263 9.208187539523747 0 0.8494850021680094 2.0 0.3494850021680094 0.6505149978319906 {I|L}{I|L}AQE{I|L}VKV;{I|L}{I|L}A[AG]E{I|L}VKV 8.0082;7.098 -;- 2240 + 1 1.128 93657.7 1.0 9297 5570 14853 HBL1_DMSO_200M_050219_1,14869 HBL1_DMSO_200M_050219_1,14869,AGAELLLKVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14870 73.376 552.0 644230.0 25 0 54478.0 + 38257 TPVRLPSI 8 194 441.7740672237752 881.5335815143503 2 441.7752868533134 MULTI CID FTMS 0 0 0 14853 196170.1875 0.0853840832852013 -12 1.0675048828125 17 Unmodified _TPVRLPSI_ ENSG00000125347|ENST00000245414|IRF1;ENST00000472045.1_1_5:131819645-131819816:-|nuORF 61.60191391372663 0.1155996433722939 3 TPVR{I|L}PS{I|L} 8 0 + 66.591 0.0 0.0 7.554 7.554 80.707 0.0 0.0 0.0 22.52722335607531 7.474250108400469 7.474250108400469 0.3439541511755095 0 1.787712738155733 1.3010299956639813 1.1861818737241734 0.0 + + TPVR{I|L}PS{I|L};TPVP{I|L}RS{I|L};TPVR{I|L}PTV;TPVP{I|L}RTV;TPVR{I|L}TPV;[{I|L}P]SR{I|L}TPV;[TP]VR{I|L}TPV;[{I|L}P]SRVPT{I|L};[{I|L}P]SR{I|L}PS{I|L};[TP]VRVPT{I|L} 7.554;7.515;6.7061;6.6671;6.3906;4.8805;4.7177;4.6728;4.5779;4.51 +;-;-;-;-;-;-;-;-;- + 921 + 1 1.128 271989.3 1.0 9298 5570 14853 HBL1_DMSO_200M_050219_1,14870 HBL1_DMSO_200M_050219_1,14870,TPVRLPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14871 73.387 534.0 837490.0 25 0 81141.0 + -1 PDCHSPPL 8 274 461.707048143052 0 461.7071716189384 PEAK CID FTMS 0 0 0 14853 203240.1875 0.8620968203740387 -3 0.1921615600585937 18 Carbamidomethyl (C) _PDC(Carbamidomethyl (C))HSPPL_ REV__ENST00000400385.2_1_21:45231454-45232126:-|nuORF 13.50788311687929 0.5021269579892848 3 QAE{M(Oxidation (M))|F} 4 -1 14.646 0.0 0.0 1.5895 0.0 0.0 212.0802206984102 231.0893496149047 443.1695703133149 0.0 0.0 0.0 0.0 0 0.1382104921644452 0.0 0.8851518780601922 0.0 QAE{M(Oxidation (M))|F} 1.5895 - 316 + 1 1.128 332310.9 1.0 9299 5570 14853 HBL1_DMSO_200M_050219_1,14871 HBL1_DMSO_200M_050219_1,14871,PDCHSPPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14872 73.396 525.0 531950.0 25 0 35246.0 + 14461 IFYDRAEYL 9 202 595.2981674662639 1188.5817819993276 2 595.2989379763603 MULTI CID FTMS 0 0 0 14853 187375.75 0.3401954652284861 -3 0.1921615600585937 19 Unmodified _IFYDRAEYL_ ENSG00000155363|ENST00000369645|MOV10;ENST00000468624.5_1_1:113217534-113241292:+|nuORF;ENST00000496577.5_1_1:113231344-113241292:+|nuORF;nc|ENSG00000155363|Q9HCE1-2|MOV10 35.61225514009592 0.0995432151795903 3 {I|L}{M(Oxidation (M))|F}YDR{[CP]|[EA]}Y{I|L} 9 0 + 55.996 0.0 0.0 4.7111 4.7111 80.678 0.0 0.0 0.0 30.857660990202543 10.134650973472894 10.134650973472894 6.628195034995358 0 1.579689690656103 0.0 0.4247425010840047 0.0 + + {I|L}{M(Oxidation (M))|F}YDR{[CP]|[EA]}Y{I|L};{I|L}{M(Oxidation (M))|F}YAV[WD]Y{I|L};{I|L}{M(Oxidation (M))|F}YDR{[CP]|[EA]}{I|L}Y;{I|L}{M(Oxidation (M))|F}YAVT{[CP]|[EA]}Y{I|L};{I|L}{M(Oxidation (M))|F}YA{[ES]|[DT]|[{I|L}C]}[PS]Y{I|L};{[RE]|[WV]}{M(Oxidation (M))|F}YVAYE{I|L};{I|L}{M(Oxidation (M))|F}YA{[ES]|[DT]|[{I|L}C]}YPS{I|L};{I|L}{M(Oxidation (M))|F}Y{[WT]|[RM]}[PS]Y{I|L};{[RE]|[WV]}{M(Oxidation (M))|F}YVAEY{I|L};{I|L}{M(Oxidation (M))|F}YAV[WD]{I|L}Y 4.7111;4.1535;3.7554;3.7491;3.5832;3.4832;3.4341;3.2973;3.2299;3.1978 +;-;-;-;-;-;-;-;-;- + 4767 + 1 1.128 204279.4 1.0 9300 5570 14853 HBL1_DMSO_200M_050219_1,14872 HBL1_DMSO_200M_050219_1,14872,IFYDRAEYL True True IFYDRAEYL 73.396181 595.29893797636 3203530.0 14853.0 ENST00000468624.5_1_1:113217534-113241292:+|nuORF;;nc|ENSG00000155363|Q9HCE1-2|MOV10;;ENSG00000155363|ENST00000369645|MOV10;;ENST00000496577.5_1_1:113231344-113241292:+|nuORF 5.294929504394531 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14873 73.398 81.0 635660.0 25 0 45631.0 + 29601 QLVPALAKV 9 90 469.8056836518825 937.596814370565 2 469.8055908083916 MULTI CID FTMS 0 0 0 14853 153202.1875 0.2996962916353443 -4 0.3260726928710937 20 Unmodified _QLVPALAKV_ ENSG00000158161|ENST00000373871|EYA3;nc|ENSG00000158161|Q99504-2|EYA3;nc|ENSG00000158161|Q99504-3|EYA3;nc|ENSG00000158161|Q99504-4|EYA3;nc|ENSG00000158161|Q99504-5|EYA3 19.256988751693697 0.3154191944385105 3 [Q{I|L}]V 3 6 19.481 0.0 0.0 2.0777 0.0 0.0 0.0 594.3628415524587 594.3628415524587 8.060861332038648 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 + [Q{I|L}]V 2.0777 + + 160 1 1.128 45300.3 1.0 9301 5570 14853 HBL1_DMSO_200M_050219_1,14873 HBL1_DMSO_200M_050219_1,14873,QLVPALAKV False True QLVPALAKV 73.398012 469.805590808392 5123092.0 14853.0 ENSG00000158161|ENST00000373871|EYA3;;nc|ENSG00000158161|Q99504-5|EYA3;;nc|ENSG00000158161|Q99504-2|EYA3;;nc|ENSG00000158161|Q99504-3|EYA3;;nc|ENSG00000158161|Q99504-4|EYA3 5.540914694468181 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14875 73.402 0.26 56275000.0 25 0 6076500.0 18369 KVPEWVDTV 9 42 536.787520797261 1071.560488661322 2 536.7881957888603 MULTI CID FTMS 0 0 0 14874 197864000.0 0.6315751304492603 -2 0.1579437255859375 1 Unmodified _KVPEWVDTV_ ENSG00000105372|ENST00000598742|RPS19 4.3292370932331545 0.7635526921153418 3 V 1 8 12.218 0.0 0.0 1.1403 0.0 0.0 954.4810646884688 0.0 954.4810646884688 0.0 9.999999999999998 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1403 + + 8 + 1 1.128 17535.6 1.0 9302 5571 14874 HBL1_DMSO_200M_050219_1,14875 HBL1_DMSO_200M_050219_1,14875,KVPEWVDTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14876 73.403 1.4 28345000.0 25 0 3504800.0 + 22130 LPPQPKVK 8 62 453.7921119878436 905.5696710424872 2 453.7923156619072 MULTI CID FTMS 0 0 0 14874 35296204.0 0.5510893194211147 3 -0.0647430419921875 2 Unmodified _LPPQPKVK_ REV__ENSG00000204463|ENST00000676615|BAG6;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6 13.50788311687929 0.7113601687236069 3 {I|L}PP 3 -1 50.445 0.0 0.0 5.5706 0.0 0.0 0.0 595.3579680438667 595.3579680438667 43.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PP 5.5706 + + 10 + 1 1.128 36644.9 1.0 9303 5571 14874 HBL1_DMSO_200M_050219_1,14876 HBL1_DMSO_200M_050219_1,14876,LPPQPKVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14877 73.404 9.0 4299400.0 25 0 709490.0 + 13540 HPFEAQTLI 9 78 528.2799578265451 1054.54536271989 2 528.2801391482353 MULTI CID FTMS 0 0 0 14874 4400523.0 0.6512085660449005 2 -0.0334014892578125 3 Unmodified _HPFEAQTLI_ ENSG00000136045|ENST00000412830|PWP1 36.506200033944 0.094635877243972 3 [EP]{[{M(Oxidation (M))|F}H]|[RQ]}AQT{I|L}{I|L} 9 2 + 30.224 0.0 0.0 2.8661 2.8661 79.054 0.0 0.0 0.0 2.1645371772964985 17.1252997059802 2.1645371772964985 9.208187539523752 0 0.6237125054200234 0.0 1.2614393726401687 0.0 [EP]{[{M(Oxidation (M))|F}H]|[RQ]}AQT{I|L}{I|L};[EP]{[{M(Oxidation (M))|F}H]|[RQ]}A[AG]T{I|L}{I|L} 2.8661;1.9929 -;- 64 1 1.128 37301.1 1.0 9304 5571 14874 HBL1_DMSO_200M_050219_1,14877 HBL1_DMSO_200M_050219_1,14877,HPFEAQTLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14878 73.406 11.0 3348200.0 25 0 371130.0 + 41827 VPYEKGFAL 9 69 512.2794656316073 1022.5443783300146 2 512.2790405154228 MULTI CID FTMS 0 0 0 14874 3973414.5 0.7038520587517876 -2 0.1579437255859375 4 Unmodified _VPYEKGFAL_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 24.020572477871973 0.2255576514309169 3 VPYE 4 5 49.725 0.0 0.0 4.8628 0.0 0.0 0.0 531.2932222955686 531.2932222955686 25.7723722827955 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 + VPYE 4.8628 + + 47 + 1 1.128 34855.8 1.0 9305 5571 14874 HBL1_DMSO_200M_050219_1,14878 HBL1_DMSO_200M_050219_1,14878,VPYEKGFAL False True VPYEKGFAL 73.40561 512.279040515423 120145248.0 14874.0 ENST00000548375.5_1_12:96405582-96408866:-|nuORF;;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;;nc|ENSG00000111144|P09960-4|LTA4H;;nc|ENSG00000111144|P09960-2|LTA4H;;nc|ENSG00000111144|P09960-3|LTA4H;;ENSG00000111144|ENST00000228740|LTA4H 8.882647832234701 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14879 73.407 18.0 2442400.0 25 0 391730.0 + -1 LPLEVMEKI 9 75 544.3086855628304 1086.6028181924607 2 544.3085815310478 MULTI CID FTMS 0 0 0 14874 3374863.0 0.6671929302751131 3 -0.0647430419921875 5 Oxidation (M) _LPLEVM(Oxidation (M))EKI_ REV__ENSG00000165280|ENST00000358901|VCP;REV__ENST00000493886.5_1_9:35062192-35072350:-|nuORF 2.059750862983233 0.8427793054688888 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.128 39009.8 1.0 9306 5571 14874 HBL1_DMSO_200M_050219_1,14879 HBL1_DMSO_200M_050219_1,14879,LPLEVMEKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14880 73.408 17.0 1788900.0 25 0 274230.0 + -1 KGKWRRRM 8 62 567.3295813073205 1132.644609681441 2 567.3300048708916 MULTI CID FTMS 0 0 0 14874 3293676.25 0.7011353591410141 2 -0.0334014892578125 6 Oxidation (M) _KGKWRRRM(Oxidation (M))_ REV__ENST00000478509.1_1_X:153674683-153677303:+|nuORF 0.6903765706972694 0.8201419426409876 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.128 27299.7 1.0 9307 5571 14874 HBL1_DMSO_200M_050219_1,14880 HBL1_DMSO_200M_050219_1,14880,KGKWRRRM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14881 73.409 12.0 4363400.0 25 0 341230.0 + 22503 LPVRGVLTV 9 73 477.3108331829908 952.6071134327816 2 477.3109619021416 MULTI CID FTMS 0 0 0 14874 3255029.75 0.4991760985933561 3 -0.0647430419921875 7 Unmodified _LPVRGVLTV_ ENSG00000164199|ENST00000405460|ADGRV1;ENST00000509621.1_3_5:89989878-90055411:+|nuORF 30.63653989081413 0.1413794767160703 3 {I|L}P{I|L} 3 6 50.005 0.0 0.0 5.2493 0.0 0.0 0.0 626.3631598552766 626.3631598552766 34.604093769761874 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}P{I|L} 5.2493 - 105 + 1 1.128 45787.8 1.0 9308 5571 14874 HBL1_DMSO_200M_050219_1,14881 HBL1_DMSO_200M_050219_1,14881,LPVRGVLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14882 73.41 23.0 1395200.0 25 0 122330.0 -1 LGRRCDMCS 9 66 549.2352117364615 1096.4558705397228 2 549.2354614138603 MULTI CID FTMS 0 0 0 14874 1234198.875 0.5885899432077192 -7 0.5652999877929688 8 Carbamidomethyl (C) _LGRRC(Carbamidomethyl (C))DMCS_ ENSG00000029725|ENST00000537505|RABEP1;ENST00000575475.2_1_17:5185712-5281605:+|nuORF;nc|ENSG00000029725|Q15276-2|RABEP1 4.75600775471527 0.7486543447549536 3 [PA]E{M(Oxidation (M))|F}E 5 -1 19.94 0.0 0.0 1.8186 0.0 0.0 0.0 520.1886335614603 520.1886335614603 6.444770428346729 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 [PA]E{M(Oxidation (M))|F}E 1.8186 - 46 1 1.128 36060.7 1.0 9309 5571 14874 HBL1_DMSO_200M_050219_1,14882 HBL1_DMSO_200M_050219_1,14882,LGRRCDMCS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14883 73.411 32.0 1306200.0 25 0 162120.0 -1 PIPRHMLAE 9 76 540.2848465386849 1078.5551401441696 2 540.2848998904228 MULTI CID FTMS 0 0 0 14874 1243584.375 0.0309472335324107 12 -0.6939620971679688 9 Oxidation (M) _PIPRHM(Oxidation (M))LAE_ ENSG00000082458|ENST00000374360|DLG3 13.50788311687929 0.4710407108020397 3 PP{I|L}E 4 -1 28.219 0.0 0.0 2.6164 0.0 0.0 624.3118819018429 0.0 624.3118819018429 0.0 -2.135380403309739 -2.135380403309739 0.0 0 0.5 0.0 0.2742275032520141 0.0 PP{I|L}E 2.6164 - 103 + 1 1.128 38896.7 1.0 9310 5571 14874 HBL1_DMSO_200M_050219_1,14883 HBL1_DMSO_200M_050219_1,14883,PIPRHMLAE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14884 73.413 22.0 1179500.0 25 0 94545.0 28410 PSSPSVLPPLV 11 54 546.8195977130372 1091.6246424928745 2 546.8199340701103 MULTI CID FTMS 0 0 0 14874 899254.4375 0.4401703243942609 -11 1.057281494140625 10 Unmodified _PSSPSVLPPLV_ ENSG00000144677|ENST00000273179|CTDSPL;nc|ENSG00000144677|O15194-2|CTDSPL 5.731851221503515 0.8481046878870278 3 P 1 10 11.99 0.0 0.0 1.0983 0.0 0.0 327.2233470467882 664.3267927652181 991.5501398120064 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + P 1.0983 + + 11 + 1 1.128 26441.8 1.0 9311 5571 14874 HBL1_DMSO_200M_050219_1,14884 HBL1_DMSO_200M_050219_1,14884,PSSPSVLPPLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14885 73.415 91.0 546760.0 25 0 77787.0 + 17824 KQLDDLKVEL 10 85 400.8994160702367 1199.67641881091 3 400.8994628787041 MULTI CID FTMS 0 0 0 14874 736518.875 0.0035637545642953 27 -1.918426513671875 11 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 55.50274090549119 0.048383292844968 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K 7 7 42.912 0.0 0.0 3.577 0.0 0.0 0.0 356.1798727506163 356.1798727506163 28.93253245374254 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.7742275032520141 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K 3.577 - 234 1 1.128 44208.2 1.0 9312 5571 14874 HBL1_DMSO_200M_050219_1,14885 HBL1_DMSO_200M_050219_1,14885,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14886 73.416 43.0 967870.0 25 0 77692.0 + 14204 IDKQDKLVLE 10 74 600.8452342256743 1199.6759155181485 2 600.8453246951103 MULTI CID FTMS 0 0 0 14874 684208.8125 0.0020362034952229 25 -1.803497314453125 12 Unmodified _IDKQDKLVLE_ REV__ENSG00000091409|ENST00000684293|ITGA6;REV__nc|ENSG00000091409|P23229-3|ITGA6;REV__nc|ENSG00000091409|P23229-4|ITGA6;REV__nc|ENSG00000091409|P23229-5|ITGA6;REV__nc|ENSG00000091409|P23229-6|ITGA6;REV__nc|ENSG00000091409|P23229-7|ITGA6;REV__nc|ENSG00000091409|P23229-9|ITGA6;REV__nc|ENSG00000091409|P23229|ITGA6 22.65808497894818 0.4596126414678359 3 {[QN]|[E{I|L}]|[KN]}KND{I|L}KVE{I|L} 10 -1 + 42.427 0.0 0.0 3.5365 3.5365 70.954 0.0 0.0 0.0 1.7609125905568137 6.689615513722202 1.7609125905568137 1.7609125905568137 0 0.4731975075880329 0.0 0.0 0.7059771852360797 {[QN]|[E{I|L}]|[KN]}KND{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}[KQ]KVE{I|L};{[QN]|[E{I|L}]|[KN]}KGGD{I|L}KVE{I|L};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}ND{I|L}KVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[Q{I|L}]D{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}[DV][KQ]KVE{I|L};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}GGD{I|L}KVE{I|L} 3.5365;3.3897;3.058;3.0522;2.7726;2.5805;1.5965;1.5552;1.5485 -;-;-;-;-;-;-;-;- 152 1 1.128 35503.3 1.0 9313 5571 14874 HBL1_DMSO_200M_050219_1,14886 HBL1_DMSO_200M_050219_1,14886,IDKQDKLVLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14887 73.417 42.0 1340700.0 25 0 82210.0 + 5533 DMHAFVTEV 9 104 524.7418765809882 1047.4692002287763 2 524.7427856326103 MULTI CID FTMS 0 0 0 14874 578839.125 0.4731275793871152 -1 0.0873870849609375 13 Unmodified _DMHAFVTEV_ ENSG00000116906|ENST00000366647|GNPAT;ENST00000492459.1_1_1:231402025-231403654:+|nuORF;nc|ENSG00000116906|O15228-2|GNPAT 20.453626601364224 0.2830276176381075 3 [{M(Oxidation (M))|F}V]TV{M(Oxidation (M))|F}A 6 7 38.645 0.0 0.0 3.6894 0.0 0.0 0.0 380.1044100397094 380.1044100397094 23.16061246681059 0.0 0.0 0.0 0 0.0 1.0 0.5 0.0 [{M(Oxidation (M))|F}V]TV{M(Oxidation (M))|F}A 3.6894 - 360 + 1 1.128 52304.4 1.0 9314 5571 14874 HBL1_DMSO_200M_050219_1,14887 HBL1_DMSO_200M_050219_1,14887,DMHAFVTEV False True DMHAFVTEV 73.417077 524.74278563261 8927535.0 14874.0 ENSG00000116906|ENST00000366647|GNPAT;;nc|ENSG00000116906|O15228-2|GNPAT;;ENST00000492459.1_1_1:231402025-231403654:+|nuORF 7.662277698516846 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14888 73.423 330.0 257470.0 25 0 29427.0 + -1 CQFMSYYEWSL 11 117 765.3079671728844 1528.6013814125688 2 765.3074218630791 MULTI CID FTMS 0 0 0 14874 510176.90625 0.7295077396185086 -2 0.1579437255859375 14 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))QFM(Oxidation (M))SYYEWSL_ REV__ENSG00000064313|ENST00000378164|TAF2 5.296884461304476 0.8501568894076437 3 {[VA]|[{I|L}G]}VEQ 5 -1 45.137 0.0 0.0 2.9528 0.0 0.0 0.0 999.3026502936812 999.3026502936812 14.737679477202532 0.0 0.0 0.0 0 1.1307196863200843 2.0 0.0 0.2887254899964357 {[VA]|[{I|L}G]}VEQ 2.9528 - 367 1 1.128 66250.5 1.0 9315 5571 14874 HBL1_DMSO_200M_050219_1,14888 HBL1_DMSO_200M_050219_1,14888,CQFMSYYEWSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14889 73.424 24.0 955370.0 25 0 62369.0 -1 VGYKDLMEN 9 63 555.7605141281423 1109.5064753230845 2 555.7603027224541 MULTI CID FTMS 0 0 0 14874 402008.84375 0.1669852999054394 -4 0.2795486450195312 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VGYKDLMEN_ ENSG00000099331|ENST00000682292|MYO9B;ENST00000593533.1_1_19:17308986-17317625:+|nuORF;ENST00000599420.5_1_19:17312953-17313848:+|nuORF;nc|ENSG00000099331|Q13459-2|MYO9B 4.3292370932331545 0.7635526921153418 3 {I|L} 1 -1 10.485 0.0 0.0 0.94497 0.0 0.0 978.411563679333 0.0 978.411563679333 0.0 -10.48455006504028 -10.48455006504028 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.94497 + + 11 + 1 1.128 24964.1 1.0 9316 5571 14874 HBL1_DMSO_200M_050219_1,14889 HBL1_DMSO_200M_050219_1,14889,VGYKDLMEN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14890 73.426 74.0 825820.0 25 0 127790.0 + 9060 FERSKDESV 9 86 366.1802123537132 1095.5188076613397 3 366.1799804568291 MULTI CID FTMS 0 0 0 14874 229985.859375 0.4029040823481467 -1 0.0873870849609375 16 Unmodified _FERSKDESV_ REV__ENSG00000138722|ENST00000264790|MMRN1;REV__nc|ENSG00000138722|Q13201-2|MMRN1 6.2057823575117 0.6980434486082533 3 {I|L}{I|L}{I|L}R 4 -1 16.887 0.0 0.0 1.5414 0.0 0.0 582.1546373746239 0.0 582.1546373746239 0.0 4.4124503685615935 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L}R 1.5414 - 63 + 1 1.128 61091.8 1.0 9317 5571 14874 HBL1_DMSO_200M_050219_1,14890 HBL1_DMSO_200M_050219_1,14890,FERSKDESV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14892 73.43 10.0 4850500.0 25 0 1087600.0 + -1 LMVVGLRL 8 64 458.7878679525143 915.5611829718288 2 458.7878295779228 MULTI CID FTMS 0 0 0 14891 6178609.5 0.8825041248141664 -1 0.0279693603515625 1 Oxidation (M) _LM(Oxidation (M))VVGLRL_ REV__ENST00000468285.1_1_10:76973815-76980729:+|nuORF 0.7936320650641473 0.8195151834710337 3 {I|L} 1 -1 10.379 0.0 0.0 1.1336 0.0 0.0 784.4663628808115 0.0 784.4663628808115 0.0 9.665266051846933 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1336 + + 6 + 1 1.128 46816.6 1.0 9318 5572 14891 HBL1_DMSO_200M_050219_1,14892 HBL1_DMSO_200M_050219_1,14892,LMVVGLRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14893 73.431 53.0 1674700.0 25 0 210480.0 + 40030 VGFSVRQRR 9 96 552.8224288558471 1103.630304778494 2 552.8234741091728 MULTI CID FTMS 0 0 0 14891 1005010.125 0.3821445699182057 4 -0.084625244140625 2 Unmodified _VGFSVRQRR_ REV__ENSG00000188976|ENST00000327044|NOC2L;REV__ENST00000452600.1_1_2:130987586-130988813:+|nuORF;REV__ENST00000477976.5_1_1:880076-889593:-|nuORF;REV__ENST00000483767.5_1_1:880076-882054:-|nuORF 4.75600775471527 0.7486543447549536 3 V 1 -1 8.8735 0.0 0.0 0.80402 0.0 0.0 986.5506900707776 0.0 986.5506900707776 0.0 8.873453591370684 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.80402 + + 8 + 1 1.128 69813.9 1.0 9319 5572 14891 HBL1_DMSO_200M_050219_1,14893 HBL1_DMSO_200M_050219_1,14893,VGFSVRQRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14895 73.435 14.0 4863300.0 25 0 469550.0 + 22320 LPSHGVPLI 9 84 466.7819373338645 931.5493217345288 2 466.7818786501884 MULTI CID FTMS 0 0 0 14894 3854049.5 0.1985224586592849 5 -0.2504730224609375 1 Unmodified _LPSHGVPLI_ ENSG00000089053|ENST00000261819|ANAPC5;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5 50.855029805455786 0.0384952370514206 3 [{I|L}P][HS]GVP{I|L}{I|L} 9 0 + 60.836 0.0 0.0 6.5307 6.5307 91.422 0.0 0.0 0.0 4.7564996996458575 30.38648192799392 4.7564996996458575 13.907854813243986 0 1.305462187404089 2.0 0.2887254899964357 0.0 + + [{I|L}P][HS]GVP{I|L}{I|L};[{I|L}P][HS]GPV{I|L}{I|L};[{M(Oxidation (M))|F}V][W{I|L}]AA{I|L}{I|L};[{M(Oxidation (M))|F}V][W{I|L}]{I|L}AA{I|L} 6.5307;5.0377;1.4751;0.55419 +;-;-;- + 433 1 1.128 57599.0 1.0 9320 5573 14894 HBL1_DMSO_200M_050219_1,14895 HBL1_DMSO_200M_050219_1,14895,LPSHGVPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14896 73.437 18.0 2509700.0 25 0 495500.0 -1 ISSLCVVVV 9 75 488.2792661744117 974.5439794156234 2 488.2788879275322 MULTI CID FTMS 0 0 0 14894 2722355.0 0.3065798985265024 5 -0.2504730224609375 2 Carbamidomethyl (C) _ISSLC(Carbamidomethyl (C))VVVV_ ENST00000477132.1_1_2:37544174-37551396:-|nuORF 21.74664581756881 0.2544899275067181 3 VTPHVVV 7 -1 28.421 0.0 0.0 2.9163 0.0 0.0 225.11180312324376 0.0 225.11180312324376 0.0 13.81691345950685 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 VTPHVVV 2.9163 - 134 1 1.128 40334.7 1.0 9321 5573 14894 HBL1_DMSO_200M_050219_1,14896 HBL1_DMSO_200M_050219_1,14896,ISSLCVVVV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14897 73.438 16.0 4959000.0 25 0 755040.0 + 14026 IAGPGLPDL 9 71 852.4828898739235 851.4756134073234 1 852.4833862185478 MULTI CID FTMS 0 0 0 14894 5446400.5 0.6262623213742814 5 -0.2504730224609375 3 Unmodified _IAGPGLPDL_ nc|ENSG00000284922|Q8WZ04-2|TOMT;nc|ENSG00000284922|Q8WZ04|TOMT 30.22481116460888 0.1466181017706357 3 [NP]A{I|L}{I|L}PEV 8 7 + 42.344 0.0 0.0 4.973 4.973 55.531 0.0 0.0 0.0 4.134752945555924 21.886700476962066 4.134752945555924 0.0 0 0.5 0.0 0.0 0.0 [NP]A{I|L}{I|L}PEV;[NP]{I|L}A{I|L}PEV;[NP]{I|L}{I|L}APEV;[EP]V[QP][{I|L}A]V;[EP][{I|L}P]N[{I|L}A]V;[EP]V[QP]V[{I|L}A];[EP][{I|L}P]NV[{I|L}A];[NP]{I|L}[EP][{I|L}A]V;[EP][{I|L}P]GGV[{I|L}A] 4.973;4.973;4.0592;2.4563;2.2166;1.6354;1.3957;0.68865;0.30795 -;-;-;-;-;-;-;-;- 257 1 1.128 61521.3 1.0 9322 5573 14894 HBL1_DMSO_200M_050219_1,14897 HBL1_DMSO_200M_050219_1,14897,IAGPGLPDL False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14898 73.439 22.0 1902000.0 25 0 173870.0 + + 11681 KLLDEAIQAV 10 83 550.3217983615174 1098.629043789835 2 550.3217040896416 MULTI CID FTMS 0 0 0 14894 2255456.0 0.5426152218267172 -4 0.19134521484375 4 Unmodified _GLERRWLAV_ ENST00000563984.1_1_16:46717374-46723045:-|nuORF;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENSG00000069329|ENST00000299138|VPS35;ENST00000569950.1_1_16:46715399-46723351:-|nuORF 23.1484247019978 0.2366544122328345 3 {[VA]|[{I|L}G]}EE[K{I|L}]{I|L}QAV 10 -1 + 32.28 0.0 0.0 2.9382 2.9382 81.627 0.0 0.0 0.0 1.1734581390271617 6.517412290202671 1.1734581390271617 19.655593552960937 0 1.1365006360318688 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}EE[K{I|L}]{I|L}QAV;[W{I|L}][H{I|L}]{I|L}[YR]V 2.9382;1.1491 -;- 117 1 1.128 41766.7 1.0 9323 5573 14894 HBL1_DMSO_200M_050219_1,14898 HBL1_DMSO_200M_050219_1,14898,GLERRWLAV False False KLLDEAIQAV 73.439025 550.321704089642 71604440.0 14894.0 ENST00000563984.1_1_16:46717374-46723045:-|nuORF;;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35;;ENST00000569950.1_1_16:46715399-46723351:-|nuORF 5.661181926727295 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14899 73.44 28.0 1753300.0 25 0 203440.0 + + 4384 DALMKSLQV 9 85 502.27585584449577 1002.5371587557916 2 502.7756530642509 MULTI CID FTMS 0 0 0 14894 1721327.625 0.7083441440533152 -5 0.2559432983398437 5 Unmodified _DAVKSKEQV_ ENSG00000132463|ENST00000254799|GRSF1;nc|ENSG00000132463|Q12849-5|GRSF1;ENST00000505068.5_1_4:71691792-71705589:-|nuORF 16.942295170755138 0.3780752226737986 3 {[DA]|[EG]}{I|L} 3 -1 27.447 0.0 0.0 2.7378 0.0 0.0 0.0 700.3661437013571 700.3661437013571 9.798187706630156 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[DA]|[EG]}{I|L} 2.7378 - 132 1 1.128 44126.9 1.0 9324 5573 14894 HBL1_DMSO_200M_050219_1,14899 HBL1_DMSO_200M_050219_1,14899,DAVKSKEQV False False DALMKSLQV 73.440202 502.775653064251 47352260.0 14894.0 ENSG00000132463|ENST00000254799|GRSF1;;nc|ENSG00000132463|Q12849-5|GRSF1;;ENST00000505068.5_1_4:71691792-71705589:-|nuORF 6.757408618927002 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14900 73.441 37.0 1635500.0 25 0 170870.0 -1 VLMLRRCL 8 74 530.8100332975487 1059.6055136618972 2 530.8105956912041 MULTI CID FTMS 0 0 0 14894 838103.0625 0.7861165832614808 -5 0.2559432983398437 6 Carbamidomethyl (C) _VLMLRRC(Carbamidomethyl (C))L_ ENSG00000255346|ENST00000388866|NOX5;ENST00000527315.5_1_15:69323805-69349033:+|nuORF;nc|ENSG00000290203|Q96PH1-2|NOX5;nc|ENSG00000290203|Q96PH1-3|NOX5;nc|ENSG00000290203|Q96PH1-4|NOX5;nc|ENSG00000290203|Q96PH1-5|NOX5;nc|ENSG00000290203|Q96PH1-6|NOX5 6.354104778181461 0.7857632046190106 3 {I|L} 1 -1 11.99 0.0 0.0 1.1315 0.0 0.0 928.5104952066224 0.0 928.5104952066224 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1315 + + 23 + 1 1.128 54113.2 1.0 9325 5573 14894 HBL1_DMSO_200M_050219_1,14900 HBL1_DMSO_200M_050219_1,14900,VLMLRRCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14901 73.447 293.0 1001200.0 25 0 96442.0 -1 0 183 456.2818762668401 455.2745998002401 1 456.2814514040947 MULTI CID FTMS 0 0 0 14894 505757.0 1.0 0 0.0 7 3 {I|L}PN{I|L} 4 -1 + 63.461 0.0 0.0 13.939 13.939 87.757 0.0 0.0 0.0 31.889815065287497 2.825382125373963 2.825382125373963 2.825382125373963 0 0.8494850021680094 1.6989700043360187 0.0 0.75 {I|L}PN{I|L};{I|L}PQV;{I|L}PGG{I|L};[{I|L}P]N{I|L};{I|L}P[AG]V;[{I|L}P]GG{I|L};{I|L}{I|L}NP;[NP]{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L};[VP]Q{I|L} 13.939;13.319;10.157;9.7308;9.5363;7.5958;5.3923;4.8493;4.3629;2.3089 -;-;-;-;-;-;-;-;-;- 123 + 1 1.128 223989.0 1.0 9326 5573 14894 HBL1_DMSO_200M_050219_1,14901 HBL1_DMSO_200M_050219_1,14901, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14902 73.452 262.0 525670.0 25 0 66874.0 + 23770 LVAQLGEQGSI 11 171 557.8091446620485 1113.603736390897 2 557.8478881716728 MULTI CID FTMS 0 0 0 -1 0 8 Unmodified _LVAQLGEQGSI_ REV__ENSG00000104043|ENST00000284509|ATP8B4;REV__ENST00000558906.5_1_15:50152393-50311102:-|nuORF;REV__ENST00000559726.5_1_15:50152393-50311102:-|nuORF;REV__ENST00000560161.1_1_15:50178110-50190397:-|nuORF;REV__ENST00000561385.5_1_15:50189347-50194027:-|nuORF 10.073929032068715 0.8255972128077141 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}GP 6 -1 30.15 0.0 0.0 2.7075 0.0 0.0 0.0 470.22577844791255 470.22577844791255 14.665762445130497 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}GP 2.7075 - 1397 + 1 1.128 106509.8 1.0 9327 5573 14894 HBL1_DMSO_200M_050219_1,14902 HBL1_DMSO_200M_050219_1,14902,LVAQLGEQGSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14903 73.458 329.0 418360.0 25 0 39604.0 + + 11872 LPFTPRTL 8 149 472.80401191100384 0 472.8039123415947 PEAK CID FTMS 0 0 0 14894 327660.0 0.9112971656070912 5 -0.2504730224609375 9 Unmodified _GLTKRRTL_ nc|ENSG00000042317|Q9P0W8-3|SPATA7;ENST00000556666.5_1_14:88883017-88904763:+|nuORF;ENST00000553626.5_1_14:88852162-88894100:+|nuORF;ENSG00000042317|ENST00000393545|SPATA7;nc|ENSG00000042317|Q9P0W8-2|SPATA7 15.768221252438446 0.4767174489346095 3 P{M(Oxidation (M))|F}TT{I|L}W 6 -1 37.44 0.0 0.0 3.9678 0.0 0.0 113.12783857640416 82.06698023013905 195.1948188065432 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 P{M(Oxidation (M))|F}TT{I|L}W 3.9678 - 593 + 1 1.128 106674.8 1.0 9328 5573 14894 HBL1_DMSO_200M_050219_1,14903 HBL1_DMSO_200M_050219_1,14903,GLTKRRTL False False LPFTPRTL 73.457596 472.803912341595 4954989.5 14894.0 nc|ENSG00000042317|Q9P0W8-3|SPATA7;;ENST00000556666.5_1_14:88883017-88904763:+|nuORF;;ENST00000553626.5_1_14:88852162-88894100:+|nuORF;;ENSG00000042317|ENST00000393545|SPATA7;;nc|ENSG00000042317|Q9P0W8-2|SPATA7 4.044558842976888 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14904 73.463 279.0 312470.0 25 0 19828.0 + 24066 LYDKLMHEQER 11 110 731.3610551506854 0 731.3614990115166 PEAK CID FTMS 0 0 0 14894 217427.0 0.783185044788236 2 -0.068634033203125 10 Unmodified _LYDKLMHEQER_ REV__ENSG00000113645|ENST00000265293|WWC1;REV__ENST00000523043.5_1_5:167798471-167835524:+|nuORF;REV__nc|ENSG00000113645|Q8IX03-2|WWC1 5.731851221503515 0.47618401536486 3 Y{I|L}T 3 -1 17.941 0.0 0.0 1.2283 0.0 0.0 895.4325462371145 185.0573214166625 1080.489867653777 0.0 0.0 0.0 0.0 0 0.0 0.0 1.5 0.0 Y{I|L}T 1.2283 - 504 + 1 1.128 69460.3 1.0 9329 5573 14894 HBL1_DMSO_200M_050219_1,14904 HBL1_DMSO_200M_050219_1,14904,LYDKLMHEQER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14906 73.467 6.1 4071700.0 25 0 203150.0 + + 28772 VPYEIQKGQALI 12 63 679.8873050309804 1357.7600571287608 2 679.8878051638603 MULTI CID FTMS 0 0 0 14905 7143301.0 0.719952859840065 1 -0.03729248046875 1 Unmodified _PYDLQLILDRI_ ENSG00000123609|ENST00000243346|NMI;ENST00000491771.5_1_2:152135291-152146334:-|nuORF 11.494710602746466 0.7960433852372589 3 VPY[R{I|L}]VQ{I|L}E 9 -1 59.804 0.0 0.0 4.4046 0.0 0.0 0.0 257.09321008853755 257.09321008853755 45.842123415689215 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 VPY[R{I|L}]VQ{I|L}E 4.4046 - 370 + 1 1.12 23261.0 1.0 9330 5574 14905 HBL1_DMSO_200M_050219_1,14906 HBL1_DMSO_200M_050219_1,14906,PYDLQLILDRI False False VPYEIQKGQALI 73.466818 679.88780516386 297456448.0 14905.0 ENSG00000123609|ENST00000243346|NMI;;ENST00000491771.5_1_2:152135291-152146334:-|nuORF 7.511154174804687 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14907 73.468 14.0 1007800.0 25 0 87708.0 + 2509 ARPPTHARTL 10 37 560.3221297725755 1118.629706611951 2 560.3221923708916 MULTI CID FTMS 0 0 0 14905 2853878.25 0.5426245591819215 6 -0.386016845703125 2 Unmodified _ARPPTHARTL_ REV__ENST00000529918.1_1_8:61178441-61193874:-|nuORF 1.1933415558491238 0.7211165886235917 3 {I|L} 1 -1 10.596 0.0 0.0 0.94722 0.0 0.0 987.534199875426 0.0 987.534199875426 0.0 10.595932038596043 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.94722 + + 3 + 1 1.12 16888.4 1.0 9331 5574 14905 HBL1_DMSO_200M_050219_1,14907 HBL1_DMSO_200M_050219_1,14907,ARPPTHARTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14908 73.469 16.0 2588700.0 25 0 360070.0 19267 LEKKGPRSE 9 65 522.296337439604 1042.578121946008 2 522.2960693240166 MULTI CID FTMS 0 0 0 14905 2541504.75 0.6750207914115949 1 -0.03729248046875 3 Unmodified _LEKKGPRSE_ ENST00000453838.2_1_1:182929095-182929497:-|nuORF;ENST00000470335.1_1_22:20837987-20843498:-|nuORF 3.5964929083625545 0.7891324200061827 3 {I|L} 1 8 10.278 0.0 0.0 0.98579 0.0 0.0 911.4832560786236 0.0 911.4832560786236 0.0 10.277586639249154 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.98579 + + 11 + 1 1.12 36894.3 1.0 9332 5574 14905 HBL1_DMSO_200M_050219_1,14908 HBL1_DMSO_200M_050219_1,14908,LEKKGPRSE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14909 73.47 18.0 3135700.0 25 0 444630.0 + 8914 FAHSILTV 8 77 444.25283103332026 886.4911091334405 2 444.2527953982353 MULTI CID FTMS 0 0 0 14905 2286536.25 0.6237584787627108 2 -0.0478515625 4 Unmodified _FAHSILTV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 42.96799951952854 0.1846367511955703 3 [{I|L}P][EC]{I|L}{I|L}TV 8 4 [{I|L}P][EC]{I|L}{I|L} + + 24.464 18.676 2.7942 2.7596 2.7596 49.743 0.0 0.0 0.0 0.0 -1.2937092834840769 -1.2937092834840769 0.0 0 0.0 0.0 0.3494850021680094 0.0 [{I|L}P][EC]{I|L}{I|L}TV 2.7596 - 102 + 1 1.12 47970.5 1.0 9333 5574 14905 HBL1_DMSO_200M_050219_1,14909 HBL1_DMSO_200M_050219_1,14909,FAHSILTV False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 14910 73.474 189.0 735910.0 25 0 173030.0 -1 0 64 1162.797886063532 3485.371828790796 3 1163.461352527142 MULTI CID FTMS 0 0 0 14905 1393546.0 0.0119718118197426 15 -1.165191650390625 5 3 {M(Oxidation (M))|F}C(Carbamidomethyl (C))Y 3 -1 10.177 0.0 0.0 0.292 0.0 0.0 1472.5016638511458 1539.6789034479127 3012.1805672990586 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C))Y 0.292 - 40 + 1 1.12 116298.8 1.0 9334 5574 14905 HBL1_DMSO_200M_050219_1,14910 HBL1_DMSO_200M_050219_1,14910, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14911 73.478 204.0 1322100.0 25 0 127810.0 + 32579 SAVELPKI 8 138 428.7607059775943 855.5068590219886 2 428.7608215212822 MULTI CID FTMS 0 0 0 14905 1072944.5 0.4756308058469265 -5 0.222686767578125 6 Unmodified _SAVELPKI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-4|BRCC3;nc|ENSG00000185515|P46736|BRCC3 39.94969957227396 0.2351327405675156 3 SAVE{I|L}PK{I|L} 8 0 + 88.197 0.0 0.0 10.309 10.309 89.324 0.0 0.0 0.0 36.40978057358331 3.802112417116064 3.802112417116064 3.802112417116064 0 1.1791746928241125 2.0 0.4247425010840047 0.1803115997617927 + + SAVE{I|L}PK{I|L};SAVE{I|L}P{I|L}K;SAVE{I|L}{I|L}PK;SAVE{I|L}{I|L}KP;SA{I|L}D{I|L}PK{I|L};SA{I|L}D{I|L}P{I|L}K;SA{I|L}D{I|L}{I|L}PK;SA{I|L}D{I|L}{I|L}KP;SAV{[VA]|[{I|L}G]}[{I|L}T]PV;SAV{[VA]|[{I|L}G]}[{I|L}T]VP 10.309;9.8649;9.2626;9.1724;8.8749;8.4305;7.8282;7.738;4.4236;4.4117 +;-;-;-;-;-;-;-;-;- + 386 + 1 1.12 210267.9 1.0 9335 5574 14905 HBL1_DMSO_200M_050219_1,14911 HBL1_DMSO_200M_050219_1,14911,SAVELPKI False True SAVELPKI 73.477902 428.760821521282 132524856.0 14905.0 nc|ENSG00000185515|P46736-4|BRCC3;;nc|ENSG00000185515|P46736-3|BRCC3;;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;;ENSG00000185515|ENST00000330045|BRCC3;;nc|ENSG00000185515|P46736|BRCC3 4.254039923350017 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14912 73.482 222.0 655820.0 25 0 29165.0 + 22582 LPYAMKPIDY 10 140 605.8123403950291 1209.610127856858 2 605.8118774294853 MULTI CID FTMS 0 0 0 14905 639882.625 0.4853112842772489 2 -0.0478515625 7 Unmodified _LPYAMKPIDY_ ENSG00000147383|ENST00000370274|NSDHL 103.41943736471065 0.0068563894390004 3 {I|L}PYAMKP{I|L}DY 10 0 + 106.75 0.0 0.0 8.8252 8.8252 98.073 0.0 0.0 0.0 43.92790030352131 13.521825181113629 13.521825181113629 36.02182518111363 0 2.528659694992122 1.6989700043360187 1.110924374808178 0.0 + + {I|L}PYAMKP{I|L}DY;{I|L}PYA{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}DY;{I|L}PYAM[R{I|L}]MC{I|L};{I|L}PY[WQ]{I|L}{I|L}DY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AMKP{I|L}{[YD]|[{M(Oxidation (M))|F}M]};[{I|L}P]YAMKP{I|L}{[YD]|[{M(Oxidation (M))|F}M]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}MKP{I|L}{[YD]|[{M(Oxidation (M))|F}M]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AM{I|L}KP{I|L}{[YD]|[{M(Oxidation (M))|F}M]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AMK{I|L}P{I|L}{[YD]|[{M(Oxidation (M))|F}M]};{I|L}PY[YG][TA]{I|L}PC{I|L} 8.8252;5.8472;5.5104;4.9561;4.9546;4.9288;4.8487;4.4353;4.351;4.3373 +;-;-;-;-;+;-;-;-;- + 2585 + 1 1.12 108420.2 1.0 9336 5574 14905 HBL1_DMSO_200M_050219_1,14912 HBL1_DMSO_200M_050219_1,14912,LPYAMKPIDY True True LPYAMKPIDY 73.482091 605.811877429485 23098672.0 14905.0 ENSG00000147383|ENST00000370274|NSDHL 8.077149550120035 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14913 73.488 320.0 656800.0 25 0 67769.0 23205 LSSLIGVLCL 10 215 509.305744813106 1016.596936693012 2 509.3078796267509 MULTI CID FTMS 0 0 0 14905 304397.21875 1.0 0 0.0 8 Unmodified _LSSLIGVLCL_ ENST00000259808.8_1_6:3113658-3113898:+|nuORF 6.723162845929126 0.6955379296933136 3 {M(Oxidation (M))|F}P{I|L} 3 9 18.708 0.0 0.0 1.8403 0.0 0.0 641.3891468732437 0.0 641.3891468732437 0.0 6.925273639487973 0.0 0.0 0 0.0916328861051033 0.0 0.0 0.0 {M(Oxidation (M))|F}P{I|L} 1.8403 - 528 1 1.12 163066.7 1.0 9337 5574 14905 HBL1_DMSO_200M_050219_1,14913 HBL1_DMSO_200M_050219_1,14913,LSSLIGVLCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14914 73.495 368.0 562510.0 25 0 50082.0 + 27393 PIHLPTML 8 199 461.265585735251 0 461.2663146853447 PEAK CID FTMS 0 0 0 14905 252259.140625 0.98009235263057 1 -0.03729248046875 9 Unmodified _PIHLPTML_ REV__ENSG00000180423|ENST00000326737|HARBI1 5.760428011301431 0.5786759180849727 3 {I|L} 1 -1 5.0886 0.0 0.0 0.5528 0.0 0.0 631.3297680563561 173.08234583072502 804.4121138870811 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {I|L} 0.5528 + + 14 + 1 1.12 158014.4 1.0 9338 5574 14905 HBL1_DMSO_200M_050219_1,14914 HBL1_DMSO_200M_050219_1,14914,PIHLPTML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14915 73.5 299.0 243250.0 25 0 37262.0 + -1 YVEWVVWCDLE 11 96 749.3390281435749 0 749.3395263552666 PEAK CID FTMS 0 0 0 14905 216259.875 0.5735678676756469 1 -0.03729248046875 10 Carbamidomethyl (C) _YVEWVVWC(Carbamidomethyl (C))DLE_ REV__nc|ENSG00000174844|Q6ZR08-4|DNAH12 8.745405648335112 0.4618489994582195 3 EMD 3 -1 19.922 0.0 0.0 1.3311 0.0 0.0 879.4276061679149 239.1041048639281 1118.531711031843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.0 EMD 1.3311 - 328 + 1 1.12 59326.5 1.0 9339 5574 14905 HBL1_DMSO_200M_050219_1,14915 HBL1_DMSO_200M_050219_1,14915,YVEWVVWCDLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14917 73.504 18.0 3238800.0 25 0 494100.0 + 30282 QYPGRSLVF 9 64 533.7891417573512 1065.5637305815023 2 533.7887451052666 MULTI CID FTMS 0 0 0 14916 3121179.5 0.5224346498370143 -3 0.074066162109375 1 Unmodified _QYPGRSLVF_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 30.63653989081413 0.1413794767160703 3 [YQ]P 3 6 33.512 0.0 0.0 3.145 0.0 0.0 0.0 674.3648178166434 674.3648178166434 16.52249673628745 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 + [YQ]P 3.145 + + 35 + 1 1.12 51407.4 1.0 9340 5575 14916 HBL1_DMSO_200M_050219_1,14917 HBL1_DMSO_200M_050219_1,14917,QYPGRSLVF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14918 73.511 355.0 159560.0 25 0 33140.0 23397 LTDWEKTKPVT 11 77 659.3567216421089 0 659.3583251833916 PEAK CID FTMS 0 0 0 14916 80033.7578125 0.1947557701528074 3 -0.1818389892578125 2 Unmodified _LTDWEKTKPVT_ ENSG00000197102|ENST00000360184|DYNC1H1 5.731851221503515 0.47618401536486 3 C(Carbamidomethyl (C))K 2 10 9.464 0.0 0.0 0.71876 0.0 0.0 201.1724810980341 824.3682955377561 1025.5407766357905 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))K 0.71876 - 47 + 1 1.12 52546.3 1.0 9341 5575 14916 HBL1_DMSO_200M_050219_1,14918 HBL1_DMSO_200M_050219_1,14918,LTDWEKTKPVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14920 73.515 16.0 3999000.0 25 0 275480.0 27071 PETDLVSAFV 10 122 539.276352257802 1076.538151582404 2 539.2749511599541 MULTI CID FTMS 0 0 0 14919 886654.9375 0.1022150373258901 -2 0.0478515625 1 Unmodified _PETDLVSAFV_ ENST00000561023.1_1_14:103803039-103803276:+|nuORF 14.838274106304384 0.5985701837916485 3 [TP]E{I|L}DQ 6 7 38.876 0.0 0.0 3.6112 0.0 0.0 0.0 390.2035928267978 390.2035928267978 22.672599589575466 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.9124379954164592 0.0 [TP]E{I|L}DQ 3.6112 - 881 1 1.12 53847.7 1.0 9342 5576 14919 HBL1_DMSO_200M_050219_1,14920 HBL1_DMSO_200M_050219_1,14920,PETDLVSAFV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14921 73.521 333.0 651040.0 25 0 43641.0 + 24801 MPIYPTYNEV 10 185 613.79159495609 1225.5686369789798 2 613.7928954958916 MULTI CID FTMS 0 0 0 14919 377289.625 0.3209438074505372 3 -0.2430496215820312 2 Unmodified _MPIYPTYNEV_ ENSG00000124201|ENST00000396105|ZNFX1;nc|ENSG00000124201|Q9P2E3-2|ZNFX1 58.6788170122104 0.0400518768368984 3 [{I|L}P]MY[TP]YNEV 10 2 + 60.588 0.0 0.0 4.9437 4.9437 75.056 0.0 0.0 0.0 8.106573953103506 8.106573953103506 8.106573953103506 1.7609125905568137 0 0.7326446478103829 1.5228787452803376 1.1549471895720984 0.3807196863200844 [{I|L}P]MY[TP]YNEV;[{I|L}P]YM[TP]YNEV;[{M(Oxidation (M))|F}V]NY[TP]Y[HS]V;[{I|L}P]MY[TP]YGGEV;[{I|L}P]Y[TP]MYNEV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}Y[TP]YNEV;[{I|L}P]YM[TP]YGGEV;[{M(Oxidation (M))|F}V]NY[TP][HS]YV;[TP]YN{[QV]|[N{I|L}]|[RA]|[KV]}YNEV;[{I|L}P]Y[TP]YMNEV 4.9437;4.8;4.2822;3.8852;3.845;3.8201;3.7416;3.4289;3.2486;3.1774 -;-;-;-;-;+;-;-;-;- + 2447 1 1.12 161159.3 1.0 9343 5576 14919 HBL1_DMSO_200M_050219_1,14921 HBL1_DMSO_200M_050219_1,14921,MPIYPTYNEV True True MPIYPTYNEV 73.520716 613.792895495892 34613379.0 14919.0 nc|ENSG00000124201|Q9P2E3-2|ZNFX1;;ENSG00000124201|ENST00000396105|ZNFX1 8.205819924672445 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14922 73.522 22.0 1405700.0 25 0 225780.0 + -1 VKPAMFNKC 9 61 547.7770305294347 1093.5395081256693 2 547.7776977419853 MULTI CID FTMS 0 0 0 14919 1608424.375 1.0 0 0.0 3 Carbamidomethyl (C) _VKPAMFNKC(Carbamidomethyl (C))_ REV__ENST00000170447.11_1_3:12624266-12624749:+|nuORF 3.944395688203298 0.7769873103969335 3 {[QV]|[N{I|L}]|[RA]|[KV]}P 3 -1 14.705 0.0 0.0 1.3447 0.0 0.0 0.0 766.2992647760374 766.2992647760374 3.4459400514778 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}P 1.3447 + + 24 + 1 1.12 31034.2 1.0 9344 5576 14919 HBL1_DMSO_200M_050219_1,14922 HBL1_DMSO_200M_050219_1,14922,VKPAMFNKC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14923 73.529 414.0 1057100.0 25 0 72288.0 + 21501 LPIANVARI 9 228 483.8086187667497 965.6026846002992 2 483.8095580935478 MULTI CID FTMS 0 0 0 14919 344959.375 0.2822770411059117 3 -0.2430496215820312 4 Unmodified _LPIANVARI_ ENSG00000120837|ENST00000240055|NFYB 85.35673624503755 0.0162188719545379 3 {I|L}P{I|L}ANVAR{I|L} 9 0 + 87.889 0.0 0.0 9.102 9.102 92.934 0.0 0.0 0.0 61.66772480037345 7.280156171532184 7.280156171532184 8.02378753635658 0 1.055462187404089 2.0 0.0 0.8283409326844267 + + {I|L}P{I|L}ANVAR{I|L};{I|L}P{I|L}GQVAR{I|L};{I|L}P{I|L}AGGVAR{I|L};{I|L}P{I|L}ANV[R{I|L}]A;{I|L}P{I|L}A{I|L}[NG]R{I|L};{I|L}P{I|L}A{I|L}{[NV]|[RG]}QV;{I|L}P{I|L}G[AG]VAR{I|L};{I|L}P{I|L}A{I|L}{[NV]|[RG]}N{I|L};{I|L}PG{I|L}QVAR{I|L};{I|L}{I|L}PANVAR{I|L} 9.102;8.2711;8.1484;7.7017;7.4719;7.4308;7.3174;7.201;7.1898;7.0441 +;-;-;-;-;-;-;-;-;- + 2933 + 1 1.12 324988.9 1.0 9345 5576 14919 HBL1_DMSO_200M_050219_1,14923 HBL1_DMSO_200M_050219_1,14923,LPIANVARI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14924 73.536 380.0 204740.0 25 0 8992.9 -1 0 100 864.9375906741906 1727.860628415181 2 865.4409667849541 MULTI CID FTMS 0 0 0 14919 261093.28125 0.4294022832832851 4 -0.338165283203125 5 3 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ 9 -1 57.758 0.0 0.0 3.3427 0.0 0.0 0.0 731.3507018864517 731.3507018864517 34.48638135581298 0.0 0.0 0.0 0 1.6677353201839438 2.0 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ 3.3427 - 478 + 1 1.12 56040.1 1.0 9346 5576 14919 HBL1_DMSO_200M_050219_1,14924 HBL1_DMSO_200M_050219_1,14924, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14925 73.544 468.0 535630.0 25 0 32688.0 -1 VSGAPSMIY 9 210 470.7278423465162 939.4411317598324 2 470.7270995974541 MULTI CID FTMS 0 0 0 14919 269358.53125 1.0 0 0.0 6 Oxidation (M) _VSGAPSM(Oxidation (M))IY_ ENST00000489839.1_1_6:29576272-29578708:-|nuORF 20.453626601364224 0.2830276176381075 3 VS 2 -1 36.858 0.0 0.0 3.9234 0.0 0.0 0.0 750.318684725715 750.318684725715 11.905279487832338 0.0 0.0 0.0 0 0.2689301784845296 1.0457574905606752 0.4247425010840047 0.0 VS 3.9234 + + 2544 + 1 1.12 192829.8 1.0 9347 5576 14919 HBL1_DMSO_200M_050219_1,14925 HBL1_DMSO_200M_050219_1,14925,VSGAPSMIY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14926 73.552 400.0 260880.0 25 0 22552.0 + -1 VYCGIALCAC 10 167 593.7580444216728 0 593.7580444216728 PEAK CID FTMS 0 0 0 -1 0 7 3 Carbamidomethyl (C) _VYC(Carbamidomethyl (C))GIALC(Carbamidomethyl (C))AC(Carbamidomethyl (C))_ REV__ENSG00000197786|ENST00000357377|OR5B17 12.531546534597751 0.3556095723513364 3 PY 2 -1 8.1876 0.0 0.0 0.69064 0.0 0.0 707.2588428943237 215.10431848697505 922.3631613812988 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 PY 0.69064 - 233 + 1 1.12 83300.5 1.0 9348 5576 14919 HBL1_DMSO_200M_050219_1,14926 HBL1_DMSO_200M_050219_1,14926,VYCGIALCAC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14927 73.559 402.0 323730.0 25 0 21706.0 -1 0 111 723.3669215562244 2167.078935268873 3 723.7017700076103 MULTI CID FTMS 0 0 0 14919 248276.453125 1.0 0 0.0 8 3 {NN|[MP]|[D{I|L}]|[EV]}TVY{I|L} 6 -1 37.913 0.0 0.0 1.7495 0.0 0.0 0.0 1459.691393479388 1459.691393479388 15.790666261321377 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.7585820071949732 0.0 {NN|[MP]|[D{I|L}]|[EV]}TVY{I|L} 1.7495 - 2522 1 1.12 109573.7 1.0 9349 5576 14919 HBL1_DMSO_200M_050219_1,14927 HBL1_DMSO_200M_050219_1,14927, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14928 73.566 415.0 375910.0 25 0 13130.0 -1 PAFCLCCCLQV 11 148 628.7677464530371 1255.5209399728742 2 628.8195068240166 MULTI CID FTMS 0 0 0 -1 0 9 Carbamidomethyl (C) _PAFC(Carbamidomethyl (C))LCCCLQV_ ENST00000524227.5_1_8:41518986-41519133:-|nuORF;nc|ENSG00000029534|P16157-14|ANK1;nc|ENSG00000029534|P16157-15|ANK1 9.38312468134398 0.8308777417566128 3 [VG]{I|L}{I|L}Q 5 -1 18.239 0.0 0.0 1.4527 0.0 0.0 0.0 742.1804913246898 742.1804913246898 1.0037054511756305 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VG]{I|L}{I|L}Q 1.4527 - 1028 1 1.12 119828.6 1.0 9350 5576 14919 HBL1_DMSO_200M_050219_1,14928 HBL1_DMSO_200M_050219_1,14928,PAFCLCCCLQV False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 14929 73.574 439.0 151110.0 25 0 11466.0 14190 IDHLWTEMI 9 121 579.2864421085376 1156.558331283875 2 581.2314941287041 MULTI CID FTMS 0 0 0 -1 0 10 Unmodified _IDHLWTEMI_ ENST00000447760.1_1_2:106986223-106992976:+|nuORF 12.531546534597751 0.4974689918368763 3 [YV]TC(Carbamidomethyl (C)) 4 8 25.406 0.0 0.0 2.1967 0.0 0.0 0.0 630.3373048617823 630.3373048617823 13.812281309285623 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [YV]TC(Carbamidomethyl (C)) 2.1967 - 204 1 1.12 54728.8 1.0 9351 5576 14919 HBL1_DMSO_200M_050219_1,14929 HBL1_DMSO_200M_050219_1,14929,IDHLWTEMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14930 73.583 436.0 289970.0 25 0 75174.0 7551 EIHWLHPQMTV 11 117 695.8527533448412 0 695.8544189333916 PEAK CID FTMS 0 0 0 14919 166886.15625 0.6087968686676961 -2 0.0478515625 11 Unmodified _EIHWLHPQMTV_ ENSG00000120899|ENST00000346049|PTK2B;nc|ENSG00000120899|Q14289-2|PTK2B 9.38312468134398 0.4559597037863106 3 VTDVKVW 7 11 30.438 0.0 0.0 2.1902 0.0 0.0 336.1403695366892 223.0726717584594 559.2130412951486 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 VTDVKVW 2.1902 - 528 + 1 1.12 94480.1 1.0 9352 5576 14919 HBL1_DMSO_200M_050219_1,14930 HBL1_DMSO_200M_050219_1,14930,EIHWLHPQMTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14931 73.589 328.0 109750.0 25 0 7580.9 + -1 PCCCCPCCTEM 11 80 661.6765014529228 0 661.6765014529228 PEAK CID FTMS 0 0 0 -1 0 12 2 Carbamidomethyl (C),Oxidation (M) _PC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCPCCTEM(Oxidation (M))_ REV__ENST00000599649.5_1_19:52149845-52150035:-|nuORF 0.0 0.4761840153648598 3 V 1 -1 6.9897 0.0 0.0 0.52899 0.0 0.0 1087.2016682117064 132.04583154849846 1219.2474997602048 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.52899 - 21 + 1 1.12 33672.2 1.0 9353 5576 14919 HBL1_DMSO_200M_050219_1,14931 HBL1_DMSO_200M_050219_1,14931,PCCCCPCCTEM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14932 73.601 680.0 534000.0 25 0 39647.0 + 8306 EQWIRPTL 8 253 348.19386526663857 1041.5597664001157 3 348.1937744021416 MULTI CID FTMS 0 0 0 14919 131314.875 0.6748325495626395 3 -0.2430496215820312 13 Unmodified _EQWIRPTL_ REV__ENST00000402907.1_1_6:143664004-143664346:+|nuORF 23.1484247019978 0.5573009939494978 3 PTR{I|L}{I|L} 5 -1 28.684 0.0 0.0 2.754 0.0 0.0 443.1788456158512 0.0 443.1788456158512 0.0 17.715299873086607 0.0 0.0 0 0.3935078169319297 0.0 0.3807196863200844 0.3494850021680094 PTR{I|L}{I|L} 2.754 - 700 + 1 1.12 308357.3 1.0 9354 5576 14919 HBL1_DMSO_200M_050219_1,14932 HBL1_DMSO_200M_050219_1,14932,EQWIRPTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14934 73.605 7.8 4707100.0 25 0 511820.0 + 41561 VPPEILNNV 9 61 497.7822691072368 993.5499852812736 2 497.7822448611259 MULTI CID FTMS 0 0 0 14933 7430187.5 0.5279185860664983 4 -0.3247604370117187 1 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 42.09456458481378 0.0639583784996157 3 [VP]PE{I|L}{I|L} 6 3 34.857 0.0 0.0 3.5083 0.0 0.0 0.0 342.14139088113603 342.14139088113603 14.436974992327125 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + [VP]PE{I|L}{I|L} 3.5083 + + 222 1 1.119 32045.9 1.0 9355 5577 14933 HBL1_DMSO_200M_050219_1,14934 HBL1_DMSO_200M_050219_1,14934,VPPEILNNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14935 73.606 12.0 3493200.0 25 0 737130.0 42095 VRELRGLG 8 64 450.2748616592415 898.535170385283 2 450.2748596072197 MULTI CID FTMS 0 0 0 14933 4224680.0 0.273129448468174 4 -0.3247604370117187 2 Unmodified _VRELRGLG_ ENSG00000171793|ENST00000650070|CTPS1 0.0 0.8243325171867699 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.119 39892.1 1.0 9356 5577 14933 HBL1_DMSO_200M_050219_1,14935 HBL1_DMSO_200M_050219_1,14935,VRELRGLG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14936 73.607 11.0 2995800.0 25 0 474830.0 + 42797 VVITEKGISDL 11 51 587.3404189105876 1172.666284887975 2 587.3401977419853 MULTI CID FTMS 0 0 0 14933 8286409.5 0.9984395183219236 3 -0.2479400634765625 3 Unmodified _VVITEKGISDL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 28.49450938151212 0.4231428536161201 3 VV{I|L}T[MT]G{I|L}T 9 5 58.478 0.0 0.0 4.9868 0.0 0.0 0.0 254.11426721744377 254.11426721744377 44.98319373273603 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 VV{I|L}T[MT]G{I|L}T 4.9868 - 353 + 1 1.119 30854.3 1.0 9357 5577 14933 HBL1_DMSO_200M_050219_1,14936 HBL1_DMSO_200M_050219_1,14936,VVITEKGISDL False True VVITEKGISDL 73.607253 587.340197741985 155270192.0 14933.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 5.407281557718913 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14937 73.608 17.0 2555000.0 25 0 257910.0 + 2273 AQGGVLPNI 9 76 434.7481829402984 867.4818129473967 2 434.7480651736259 MULTI CID FTMS 0 0 0 14933 3397830.75 0.2952266946534893 4 -0.3247604370117187 4 Unmodified _AQGGVLPNI_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000454426.1_1_6:25882256-25882391:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 54.773552608820026 0.0299037012502309 3 {[NV]|[RG]}AQ{I|L}PN{I|L} 8 4 {[NV]|[RG]}AQ + + 30.539 1.4267 0.34611 3.5204 3.5204 51.29 0.0 0.0 0.0 0.0 18.945247061488857 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.6549471895720985 {[NV]|[RG]}AQ{I|L}PN{I|L} 3.5204 - 112 + 1 1.119 41430.6 1.0 9358 5577 14933 HBL1_DMSO_200M_050219_1,14937 HBL1_DMSO_200M_050219_1,14937,AQGGVLPNI True True AQGGVLPNI 73.608432 434.748065173626 234682584.0 14933.0 ENSG00000196747|ENST00000358739|H2AC13;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000276903|ENST00000613174|H2AC16;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000274997|ENST00000377459|H2AC12;;ENST00000454426.1_1_6:25882256-25882391:-|nuORF;;ENSG00000184270|ENST00000331128|H2AC21;;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;;ENSG00000180573|ENST00000377791|H2AC6;;nc|ENSG00000246705|Q9BTM1-2|H2AJ;;ENSG00000246705|ENST00000544848|H2AJ 4.145474354426066 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14938 73.61 17.0 1964600.0 25 0 179200.0 + 7984 ELWTEQLL 8 62 516.2741984091926 1030.5338438851852 2 516.2740356326103 MULTI CID FTMS 0 0 0 14933 2423268.5 0.2699529133080395 -5 0.1748504638671875 5 Unmodified _ELWTEQLL_ REV__ENSG00000197930|ENST00000395686|ERO1A;REV__ENST00000554019.5_1_14:53110290-53130527:-|nuORF;REV__ENST00000556039.5_1_14:53110276-53130527:-|nuORF 19.256988751693697 0.6264283240490721 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[DP]VQ{I|L} 9 -1 + 40.111 0.0 0.0 3.8923 3.8923 52.233 0.0 0.0 0.0 3.925449767853309 23.913187455970544 3.925449767853309 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[DP]VQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]{I|L}VQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]V{I|L}Q{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[DP]N{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]{I|L}N{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]VQ{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}N[DP]{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]{I|L}V[AG]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[DP]V[AG]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]V{I|L}[AG]{I|L} 3.8923;3.8923;3.6002;3.308;3.308;3.0159;3.0159;2.9987;2.9987;2.7066 -;-;-;-;-;-;-;-;-;- 180 1 1.119 31782.4 1.0 9359 5577 14933 HBL1_DMSO_200M_050219_1,14938 HBL1_DMSO_200M_050219_1,14938,ELWTEQLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14939 73.611 28.0 1444700.0 25 0 101180.0 + 16307 IWRRLPSV 8 82 513.8123127779472 1025.6100726226944 2 513.8134643435478 MULTI CID FTMS 0 0 0 14933 1729125.625 0.880468139260183 -2 0.1007843017578125 6 Unmodified _IWRRLPSV_ REV__ENSG00000198854|ENST00000368775|C1orf68 24.67388899826682 0.525179942228231 3 [PS]VS{I|L}K{I|L} 7 -1 47.981 0.0 0.0 4.6783 0.0 0.0 0.0 298.1400810948516 298.1400810948516 30.23387189888815 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.0 0.3807196863200844 [PS]VS{I|L}K{I|L} 4.6783 - 175 1 1.119 38835.1 1.0 9360 5577 14933 HBL1_DMSO_200M_050219_1,14939 HBL1_DMSO_200M_050219_1,14939,IWRRLPSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14940 73.612 57.0 2065600.0 25 0 312450.0 + 16284 IVWQEDPRL 9 110 578.3123866595781 1154.6102203859562 2 578.3114501833916 MULTI CID FTMS 0 0 0 14933 1003003.1875 0.2582135891999613 5 -0.4364242553710937 7 Unmodified _IVWQEDPRL_ ENSG00000198000|ENST00000442668|NOL8;ENST00000463593.6_1_9:95061133-95062278:-|nuORF;ENST00000544867.5_1_9:95060120-95062368:-|nuORF;nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8 49.93300154707207 0.0405168250806675 3 {I|L}VWG[WE]{I|L}[RP] 9 4 + 63.768 0.0 0.0 5.5229 5.5229 81.638 0.0 0.0 0.0 51.54976418978278 2.72826267747471 2.72826267747471 4.771212547196626 0 0.7134679910804405 1.6989700043360187 0.0 0.7302046884880937 {I|L}VWG[WE]{I|L}[RP];{I|L}VWG[WE][RP]{I|L};{I|L}VWQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[HV]{I|L};{I|L}V{[DA]|[EG]}G[WE]{I|L}[RP];{I|L}VW{[RE]|[WV]}[NP]E{I|L};{I|L}VW{[RE]|[WV]}{[CP]|[EA]}[RP] 5.5229;5.1097;4.9489;4.7254;4.722;4.2702 -;-;-;-;-;- 447 + 1 1.119 91235.8 1.0 9361 5577 14933 HBL1_DMSO_200M_050219_1,14940 HBL1_DMSO_200M_050219_1,14940,IVWQEDPRL True True IVWQEDPRL 73.612244 578.311450183392 34071120.0 14933.0 ENST00000463593.6_1_9:95061133-95062278:-|nuORF;;ENSG00000198000|ENST00000442668|NOL8;;nc|ENSG00000198000|Q76FK4-2|NOL8;;nc|ENSG00000198000|Q76FK4-4|NOL8;;ENST00000544867.5_1_9:95060120-95062368:-|nuORF 6.97022279103597 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14941 73.614 77.0 705120.0 25 0 63177.0 + 35003 SQPDLLHQL 9 86 525.783120907618 1049.551688882036 2 525.7835571169853 MULTI CID FTMS 0 0 0 14933 983530.8125 0.6565542977091746 -2 0.1007843017578125 8 Unmodified _SQPDLLHQL_ ENSG00000012817|ENST00000317961|KDM5D;ENSG00000073614|ENST00000399788|KDM5A;ENSG00000117139|ENST00000367265|KDM5B;ENSG00000126012|ENST00000375401|KDM5C;ENST00000465402.1_1_X:53230656-53239709:-|nuORF;ENST00000492117.1_1_Y:21877982-21883284:-|nuORF;ENST00000497100.5_1_X:53227940-53240837:-|nuORF;ENST00000544777.1_1_12:442481-443474:-|nuORF;nc|ENSG00000012817|Q9BY66-2|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D;nc|ENSG00000073614|P29375-2|KDM5A;nc|ENSG00000117139|Q9UGL1-2|KDM5B;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C 32.78568957990786 0.1150597335874693 3 {[QS]|[NT]}PD{I|L}{I|L}HQ{I|L} 9 0 + 49.169 0.0 0.0 4.6848 4.6848 84.999 0.0 0.0 0.0 15.386730124635683 12.61947817248646 12.61947817248646 12.61947817248646 0 0.5 0.8239087409443188 0.0 0.6421590589602533 + + {[QS]|[NT]}PD{I|L}{I|L}HQ{I|L};{[QS]|[NT]}PD{I|L}{I|L}HAAV;{[QS]|[NT]}PD{I|L}{I|L}H[AG]{I|L};{[QS]|[NT]}{[QN]|[E{I|L}]|[KN]}[VP]HQ{I|L};[DP]{I|L}[{I|L}A]{I|L}D{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HK]{I|L}HQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}P[{I|L}A]{I|L}D{M(Oxidation (M))|F}{M(Oxidation (M))|F};[DP]{I|L}[H{I|L}][KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[HQ]{I|L}[{I|L}T][QP]DV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HK]{I|L}HAAV 4.6848;3.4824;3.1956;2.6164;1.4767;0.94371;0.46472;0.40138;0.13244;0.098946 +;-;-;-;-;-;-;-;-;- + 145 + 1 1.119 46263.9 1.0 9362 5577 14933 HBL1_DMSO_200M_050219_1,14941 HBL1_DMSO_200M_050219_1,14941,SQPDLLHQL True True SQPDLLHQL 73.614028 525.783557116985 34098468.0 14933.0 ENST00000544777.1_1_12:442481-443474:-|nuORF;;nc|ENSG00000126012|P41229-2|KDM5C;;ENSG00000117139|ENST00000367265|KDM5B;;ENSG00000012817|ENST00000317961|KDM5D;;ENST00000465402.1_1_X:53230656-53239709:-|nuORF;;nc|ENSG00000117139|Q9UGL1-2|KDM5B;;nc|ENSG00000126012|P41229-3|KDM5C;;ENST00000492117.1_1_Y:21877982-21883284:-|nuORF;;nc|ENSG00000126012|P41229-4|KDM5C;;ENST00000497100.5_1_X:53227940-53240837:-|nuORF;;ENSG00000073614|ENST00000399788|KDM5A;;nc|ENSG00000126012|P41229-5|KDM5C;;nc|ENSG00000012817|Q9BY66-2|KDM5D;;nc|ENSG00000012817|Q9BY66-3|KDM5D;;ENSG00000126012|ENST00000375401|KDM5C;;nc|ENSG00000073614|P29375-2|KDM5A 6.905671278635661 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14942 73.618 213.0 387210.0 25 0 60444.0 27209 PGKKVEPVPVT 11 113 575.8429688153368 1149.6713846974735 2 575.8431274294853 MULTI CID FTMS 0 0 0 14933 845895.1875 0.2355071056578614 9 -0.7564315795898438 9 Unmodified _PGKKVEPVPVT_ ENSG00000126777|ENST00000395314|KTN1;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1 2.735195868890462 0.8622431031272658 3 {I|L} 1 11 10.278 0.0 0.0 0.89396 0.0 0.0 1018.5763357246204 0.0 1018.5763357246204 0.0 7.178642847807186 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.89396 - 24 + 1 1.119 65643.0 1.0 9363 5577 14933 HBL1_DMSO_200M_050219_1,14942 HBL1_DMSO_200M_050219_1,14942,PGKKVEPVPVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14943 73.623 243.0 929390.0 25 0 56912.0 + 29330 QIPQVLNQV 9 174 519.8006456242545 1037.5867383153088 2 519.8010742068291 MULTI CID FTMS 0 0 0 14933 698683.875 0.2164079127769567 -5 0.1748504638671875 10 Unmodified _QIPQVLNQV_ ENSG00000205339|ENST00000379719|IPO7 64.23631603340823 0.0237365939569086 3 [Q{I|L}][KC]Q{I|L}E 7 6 48.918 0.0 0.0 4.7146 0.0 0.0 0.0 192.11475549869377 192.11475549869377 17.429128589900188 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.3807196863200844 0.7742275032520141 [Q{I|L}][KC]Q{I|L}E 4.7146 - 2877 + 1 1.119 171864.0 1.0 9364 5577 14933 HBL1_DMSO_200M_050219_1,14943 HBL1_DMSO_200M_050219_1,14943,QIPQVLNQV True True QIPQVLNQV 73.622617 519.801074206829 35164556.0 14933.0 ENSG00000205339|ENST00000379719|IPO7 4.84777037302653 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14944 73.628 315.0 614690.0 25 0 46079.0 + 21099 LPAIIRGV 8 156 419.7792814925942 837.5440100519884 2 419.7789794802666 MULTI CID FTMS 0 0 0 14933 530113.375 0.3106120847523035 4 -0.3247604370117187 11 Unmodified _LPAIIRGV_ REV__ENSG00000135953|ENST00000258436|MFSD9 26.34127834903884 0.4900704351052977 3 {I|L}AP{I|L}V 5 -1 45.221 0.0 0.0 5.3993 0.0 0.0 0.0 341.1944674127563 341.1944674127563 33.002669794978274 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 {I|L}AP{I|L}V 5.3993 - 169 + 1 1.119 153926.0 1.0 9365 5577 14933 HBL1_DMSO_200M_050219_1,14944 HBL1_DMSO_200M_050219_1,14944,LPAIIRGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14945 73.633 268.0 518990.0 25 0 40543.0 + 10179 FQDDRYLYM 9 146 625.7788081181867 1249.5430633031733 2 625.7783080935478 MULTI CID FTMS 0 0 0 14933 479752.9375 1.0 0 0.0 12 Unmodified _FQDDRYLYM_ ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2;ENST00000582445.1_1_18:18625251-18629157:-|nuORF 51.41523569358685 0.0372669606867193 3 [YV]{M(Oxidation (M))|F}{I|L}C{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DQE 10 9 + 48.179 0.0 0.0 3.8557 3.8557 71.546 0.0 0.0 0.0 1.7018778256049671 1.7018778256049671 1.7018778256049671 1.7018778256049671 0 0.3252574989159953 1.5228787452803376 0.3054621874040891 0.4247425010840047 [YV]{M(Oxidation (M))|F}{I|L}C{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DQE;{M(Oxidation (M))|F}QD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}C{I|L}{M(Oxidation (M))|F}{I|L}M;[YV]{M(Oxidation (M))|F}[HD]Y{I|L}YM;[YV]{M(Oxidation (M))|F}{I|L}C{[MS]|[{M(Oxidation (M))|F}A]}MQE;[{M(Oxidation (M))|F}V]Y{I|L}C{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DQE;{M(Oxidation (M))|F}QM{[MS]|[{M(Oxidation (M))|F}A]}C{I|L}{M(Oxidation (M))|F}{I|L}M;[YV]{M(Oxidation (M))|F}[HD]Y{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{M(Oxidation (M))|F}QD[TP][HD]{M(Oxidation (M))|F}{I|L}M;[{M(Oxidation (M))|F}V]Y[HD]Y{I|L}YM;[{M(Oxidation (M))|F}V]Y{I|L}C{[MS]|[{M(Oxidation (M))|F}A]}MQE 3.8557;3.7195;3.6299;3.6148;3.5148;3.4786;3.389;3.3377;3.289;3.2739 -;-;-;-;-;-;-;-;-;- 1814 1 1.119 106458.6 1.0 9366 5577 14933 HBL1_DMSO_200M_050219_1,14945 HBL1_DMSO_200M_050219_1,14945,FQDDRYLYM True True FQDDRYLYM 73.633324 625.778308093548 4675390.5 14933.0 ENSG00000134318|ENST00000315872|ROCK2;;ENST00000582445.1_1_18:18625251-18629157:-|nuORF;;ENSG00000067900|ENST00000399799|ROCK1 7.350386778513591 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14946 73.639 332.0 330510.0 25 0 63851.0 -1 0 79 1089.7845290106045 3266.3317576320133 3 1090.116503894329 MULTI CID FTMS 0 0 0 14933 350877.84375 0.557934254729011 -2 0.1007843017578125 13 3 AST{I|L}N 5 -1 32.95 0.0 0.0 1.0088 0.0 0.0 2481.922413297694 295.1417330377563 2777.0641463354505 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6237125054200234 1.4802046884880935 AST{I|L}N 1.0088 - 485 + 1 1.119 92753.1 1.0 9367 5577 14933 HBL1_DMSO_200M_050219_1,14946 HBL1_DMSO_200M_050219_1,14946, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14947 73.645 324.0 476470.0 25 0 48171.0 -1 0 137 857.9294110897305 1713.8442692462609 2 857.9294921755791 MULTI CID FTMS 0 0 0 14933 292528.03125 0.2510678749527147 12 -1.0271148681640625 14 3 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}T]{I|L}Q 15 -1 + 96.372 0.0 0.0 5.6231 5.6231 76.089 0.0 0.0 0.0 65.11119749777365 12.05136871872881 12.05136871872881 0.9691001300805624 0 1.25 2.0 0.805462187404089 1.579689690656103 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}T]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ{[CP]|[EA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ{[CP]|[EA]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}T]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQ{[CP]|[EA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQ{[CP]|[EA]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[YV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[HG]|PP};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[QP]{[{M(Oxidation (M))|F}C]|[YS]}[K{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[DV][K{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDAN{I|L}[DP][HA] 5.6231;5.5666;5.2615;4.985;4.9284;4.6233;4.2771;4.2504;4.1775;4.0691 -;-;-;-;-;-;-;-;-;- 4497 + 1 1.119 104038.3 1.0 9368 5577 14933 HBL1_DMSO_200M_050219_1,14947 HBL1_DMSO_200M_050219_1,14947, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14948 73.651 316.0 1115900.0 25 0 176220.0 42969 VVSVPQPRSPR 11 183 611.3558712348582 1220.6971895365164 2 611.3547241091728 MULTI CID FTMS 0 0 0 14933 282837.0 0.1374917360192891 -8 0.3607635498046875 15 Unmodified _VVSVPQPRSPR_ ENSG00000181234|ENST00000435159|TMEM132C 8.155526934196011 0.8366696279279818 3 [EP]WV 4 10 22.018 0.0 0.0 1.8037 0.0 0.0 0.0 706.4304665506908 706.4304665506908 5.859454940212327 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0591430016092656 0.0 [EP]WV 1.8037 - 226 1 1.119 254870.6 1.0 9369 5577 14933 HBL1_DMSO_200M_050219_1,14948 HBL1_DMSO_200M_050219_1,14948,VVSVPQPRSPR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14949 73.657 335.0 474060.0 25 0 24931.0 + 34160 SLMDHTIPEV 10 179 571.2821586911157 1140.5497644490313 2 571.2819091677666 MULTI CID FTMS 0 0 0 14933 240324.015625 0.5640608572698093 -1 0.0902252197265625 16 Unmodified _SLMDHTIPEV_ ENSG00000137575|ENST00000260130|SDCBP;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP 65.23502041540118 0.0228537820337083 3 [EP]EE{I|L}S{I|L}PEV 10 6 + 58.405 0.0 0.0 5.1208 5.1208 75.796 0.0 0.0 0.0 1.801565418457308 1.801565418457308 1.801565418457308 1.801565418457308 0 1.0317183090963749 1.5228787452803376 1.620371515030528 0.0 [EP]EE{I|L}S{I|L}PEV;{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T]MS{I|L}VM{I|L};[EP]VNMN{I|L}PEV;[EP]EEVT{I|L}PEV;[EP]EE{I|L}S{I|L}PD{I|L};[EP]VEET{I|L}PEV;{NN|[MP]|[D{I|L}]|[EV]}[YG]MS{I|L}VM{I|L};[EP]{I|L}EES{I|L}PEV;[EP]V{[ET]|[MV]}E{I|L}PEV;[EP]V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{I|L}PEV 5.1208;4.9628;4.7938;4.7176;4.7085;4.5074;4.4399;4.4336;4.3979;4.3979 -;-;-;-;-;-;-;-;-;- 4863 1 1.119 124387.5 1.0 9370 5577 14933 HBL1_DMSO_200M_050219_1,14949 HBL1_DMSO_200M_050219_1,14949,SLMDHTIPEV True True SLMDHTIPEV 73.65713 571.281909167767 5204975.5 14933.0 nc|ENSG00000137575|O00560-2|SDCBP;;ENSG00000137575|ENST00000260130|SDCBP;;nc|ENSG00000137575|O00560-3|SDCBP 5.1935427983601885 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14950 73.666 431.0 312340.0 25 0 46606.0 + 10819 FYYDGKVMKL 10 132 421.88613419811855 1262.6365731945557 3 421.8865844607353 MULTI CID FTMS 0 0 0 14933 215100.6875 0.2949646533782155 5 -0.4364242553710937 17 Unmodified _FYYDGKVMKL_ ENSG00000198900|ENST00000361337|TOP1 22.774965066869 0.4569865297271528 3 [Y{M(Oxidation (M))|F}]YD[KG]VMK{I|L} 10 0 + 34.243 0.0 0.0 2.712 2.712 77.18 0.0 0.0 0.0 7.269987279362624 8.603380065709928 7.269987279362624 8.603380065709928 0 0.3252574989159953 0.0 0.0 0.2396518287104437 + + [Y{M(Oxidation (M))|F}]YD[KG]VMK{I|L};[Y{M(Oxidation (M))|F}]YD[KG]VM{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}Y[RK]DY[YE];[{I|L}V]V[MT][{M(Oxidation (M))|F}V]Y[YE];{[QV]|[N{I|L}]|[RA]|[KV]}{[HG]|PP}[RP]DY[YE];[{I|L}V]V[NP]{[MG]|[TS]}E{I|L}[YE];{[QV]|[N{I|L}]|[RA]|[KV]}{[HG]|PP}T[PG]Y{I|L}[YE];[KG][HV]T[PG]Y{I|L}[YE];{[QV]|[N{I|L}]|[RA]|[KV]}{[HG]|PP}T[PG]{I|L}Y[YE];[Y{M(Oxidation (M))|F}]Y{I|L}[PG][YN]KV 2.712;2.0306;1.096;0.99665;0.84355;0.72586;0.33337;0.29673;0.27025;0.25316 +;-;-;-;-;-;-;-;-;- + 496 + 1 1.119 115917.0 1.0 9371 5577 14933 HBL1_DMSO_200M_050219_1,14950 HBL1_DMSO_200M_050219_1,14950,FYYDGKVMKL False True FYYDGKVMKL 73.665961 421.886584460735 7498203.5 14933.0 ENSG00000198900|ENST00000361337|TOP1 6.125649293263753 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14951 73.668 91.0 500820.0 25 0 61002.0 + 21388 LPFVLWGL 8 77 472.7827179237007 943.5508829142016 2 472.7825805544853 MULTI CID FTMS 0 0 0 14933 160923.75 0.7273335383223826 -1 0.0902252197265625 18 Unmodified _LPFVLWGL_ REV__ENST00000548984.1_1_12:53691573-53691735:+|nuORF;REV__ENST00000552341.5_1_12:53691573-53693126:+|nuORF 32.45364647766026 0.3613649037604678 3 {I|L}P{M(Oxidation (M))|F}TT[RP]{I|L} 8 -1 + 67.912 0.0 0.0 7.1975 7.1975 89.567 0.0 0.0 0.0 50.14772269717401 8.984032236941601 8.984032236941601 7.7815125038364386 0 0.6989700043360187 1.6989700043360187 0.4247425010840047 0.0 {I|L}P{M(Oxidation (M))|F}TT[RP]{I|L};{I|L}P{M(Oxidation (M))|F}T[RP]T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[K{I|L}]T[EP]{I|L};[KG][TA]TT[RP]{I|L};[KG][TA]T[RP]T{I|L} 7.1975;6.3728;3.8718;2.3253;1.5006 -;-;-;-;- 95 + 1 1.119 40802.6 1.0 9372 5577 14933 HBL1_DMSO_200M_050219_1,14951 HBL1_DMSO_200M_050219_1,14951,LPFVLWGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14952 73.675 417.0 131210.0 25 0 29332.0 -1 0 62 1053.9250703619707 0 1053.922045886517 PEAK CID FTMS 0 0 0 14933 132880.546875 0.4968030446259359 2 -0.1528244018554687 19 3 G{M(Oxidation (M))|F}ATS 5 -1 15.662 0.0 0.0 0.74374 0.0 0.0 1242.4598686518727 397.15183435611567 1639.6117030079884 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F}ATS 0.74374 - 252 + 1 1.119 48707.1 1.0 9373 5577 14933 HBL1_DMSO_200M_050219_1,14952 HBL1_DMSO_200M_050219_1,14952, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14953 73.682 354.0 302750.0 25 0 11268.0 + 45104 YPYPYPHTLY 10 160 657.3137392995932 1312.6129256659865 2 657.3168212771416 MULTI CID FTMS 0 0 0 14933 148338.171875 0.0568201694073204 13 -1.1142349243164062 20 Unmodified _YPYPYPHTLY_ ENSG00000116221|ENST00000360840|MRPL37 32.30548876998284 0.2428506522065767 3 V{M(Oxidation (M))|F}MDSNP 7 10 54.601 0.0 0.0 4.1597 0.0 0.0 0.0 519.2802218072874 519.2802218072874 14.367223859433407 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.2742275032520141 V{M(Oxidation (M))|F}MDSNP 4.1597 - 1822 + 1 1.119 83521.3 1.0 9374 5577 14933 HBL1_DMSO_200M_050219_1,14953 HBL1_DMSO_200M_050219_1,14953,YPYPYPHTLY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14955 73.686 0.31 125480000.0 25 0 15396000.0 + 18370 KVPEWVDTV 9 66 536.787520797261 1071.560488661322 2 536.7883178591728 MULTI CID FTMS 0 0 0 14954 163106560.0 0.5206305690228141 5 -0.4100875854492187 1 Unmodified _KVPEWVDTV_ ENSG00000105372|ENST00000598742|RPS19 34.93206674587334 0.1032771302489716 3 [EP]WVKVDTV 9 4 + 56.604 0.0 0.0 5.2824 5.2824 82.082 0.0 0.0 0.0 5.642492736872597 41.11941264025134 5.642492736872597 6.154239528859442 0 0.5 0.0 0.0 0.0 [EP]WVKVDTV;{[RE]|[WV]}[EP]KVDTV;{[RE]|[WV]}[TP]RVDTV;[EP]WVDTVKV;{[MG]|[TS]}[HS]VKVDTV;{[ES]|[DT]|[{I|L}C]}VV[QP]VDTV;{[RE]|[WV]}[EP]DTVKV;[W{M(Oxidation (M))|F}]VR[HQ]TV;{[RE]|[WV]}[TP][VG]VDTV;{[QV]|[N{I|L}]|[RA]|[KV]}[EP]WVDTV 5.2824;4.7081;4.4271;4.3705;4.1421;3.8135;3.7962;3.6797;3.5678;3.3521 -;-;-;-;-;-;-;-;-;+ + 246 1 1.119 38382.7 1.0 9375 5578 14954 HBL1_DMSO_200M_050219_1,14955 HBL1_DMSO_200M_050219_1,14955,KVPEWVDTV True True KVPEWVDTV 73.68595 536.788317859173 9900642304.0 14954.0 ENSG00000105372|ENST00000598742|RPS19 6.841239770253499 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14956 73.687 1.8 31122000.0 25 0 4881700.0 + 21996 LPPPITLR 8 54 453.7921119878436 905.5696710424872 2 453.7923461794853 MULTI CID FTMS 0 0 0 14954 29415840.0 0.4592775825355158 10 -0.9189682006835938 2 Unmodified _LPPPITLR_ REV__ENSG00000127152|ENST00000357195|BCL11B;REV__nc|ENSG00000127152|Q9C0K0-2|BCL11B 13.90604991867851 0.7054780292895731 3 {I|L}PPP 4 -1 54.68 0.0 0.0 6.0382 0.0 0.0 0.0 498.3111055963501 498.3111055963501 47.69077524932108 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPP 6.0382 + + 16 + 1 1.119 48998.2 1.0 9376 5578 14954 HBL1_DMSO_200M_050219_1,14956 HBL1_DMSO_200M_050219_1,14956,LPPPITLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14957 73.688 26.0 1800800.0 25 0 378570.0 + 5456 DLQVHRRLP 9 62 567.3295813073205 1132.644609681441 2 567.3303710818291 MULTI CID FTMS 0 0 0 14954 2421873.0 0.5155518231790163 9 -0.800933837890625 3 Unmodified _DLQVHRRLP_ REV__ENST00000228682.6_1_12:57853947-57857506:+|nuORF 1.0714618166137932 0.8772799748779447 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.119 44816.3 1.0 9377 5578 14954 HBL1_DMSO_200M_050219_1,14957 HBL1_DMSO_200M_050219_1,14957,DLQVHRRLP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14958 73.689 18.0 2130000.0 25 0 352730.0 13151 HFLEKLTIS 9 64 544.3086855628304 1086.6028181924607 2 544.3088867068291 MULTI CID FTMS 0 0 0 14954 2327809.5 0.4601958780037133 10 -0.9189682006835938 4 Unmodified _HFLEKLTIS_ ENSG00000144406|ENST00000673920|UNC80;ENST00000489023.5_1_2:210693994-210832362:+|nuORF;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80 3.944395688203298 0.7769873103969335 3 M 1 9 10.969 0.0 0.0 1.0095 0.0 0.0 937.5507227108186 0.0 937.5507227108186 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.0095 - 4 + 1 1.119 32118.7 1.0 9378 5578 14954 HBL1_DMSO_200M_050219_1,14958 HBL1_DMSO_200M_050219_1,14958,HFLEKLTIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14959 73.691 30.0 1271600.0 25 0 73420.0 + 27930 PLTQDLPVPL 10 73 546.8195977130372 1091.6246424928745 2 546.8217040896416 MULTI CID FTMS 0 0 0 14954 1950196.25 0.9545891353969228 -4 0.2191314697265625 5 Unmodified _PLTQDLPVPL_ REV__ENSG00000198183|ENST00000354297|BPIFA1 13.90604991867851 0.6142120002215601 3 PG 2 -1 18.271 0.0 0.0 1.6738 0.0 0.0 327.2224917326551 607.2982271783811 934.5207189110364 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 PG 1.6738 - 41 + 1 1.119 36455.1 1.0 9379 5578 14954 HBL1_DMSO_200M_050219_1,14959 HBL1_DMSO_200M_050219_1,14959,PLTQDLPVPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14960 73.692 24.0 1564800.0 25 0 163660.0 + 41828 VPYEKGFAL 9 64 512.2794656316073 1022.5443783300146 2 512.2794677615166 MULTI CID FTMS 0 0 0 14954 1750900.625 0.3101551598948566 5 -0.4100875854492187 6 Unmodified _VPYEKGFAL_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 30.63653989081413 0.1413794767160703 3 VPYE 4 5 54.469 0.0 0.0 5.3268 0.0 0.0 0.0 531.2920626275999 531.2920626275999 39.86494082808356 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.3807196863200844 0.0 + VPYE 5.3268 + + 72 + 1 1.119 37940.3 1.0 9380 5578 14954 HBL1_DMSO_200M_050219_1,14960 HBL1_DMSO_200M_050219_1,14960,VPYEKGFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14961 73.693 36.0 1549100.0 25 0 118460.0 + 35114 SQWEDIHVV 9 97 556.7720417006988 1111.5295304681974 2 556.7724487185478 MULTI CID FTMS 0 0 0 14954 1498239.5 0.9542141196337818 -1 0.0810546875 7 Unmodified _SQWEDIHVV_ ENSG00000075884|ENST00000295095|ARHGAP15;ENST00000549436.5_1_2:144276854-144461094:+|nuORF 34.10243960390752 0.1078313939113124 3 {[QS]|[NT]}WED{I|L}HVV 9 0 + 37.641 0.0 0.0 3.3865 3.3865 68.412 0.0 0.0 0.0 0.4840977691767278 0.4840977691767278 0.4840977691767278 0.4840977691767278 0 0.5 1.0 0.0 0.0 + + {[QS]|[NT]}WED{I|L}HVV;[HV]EEVW[NS]{I|L};[HV]EEWV[NS]{I|L};[H{I|L}]DEVW[NS]{I|L};[H{I|L}]DEWV[NS]{I|L};{[QS]|[NT]}[R{M(Oxidation (M))|F}]V{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L};[HV]EEV{[DA]|[EG]}[WK];[HV]EE{[DA]|[EG]}V[WK];[WE]D[H{I|L}]V[NS]{I|L};[H{I|L}]DE{[DA]|[EG]}V[WK] 3.3865;3.3429;3.3429;3.1845;3.1845;2.3932;1.9268;1.9268;1.808;1.7684 +;-;-;-;-;-;-;-;-;- + 270 + 1 1.119 50229.3 1.0 9381 5578 14954 HBL1_DMSO_200M_050219_1,14961 HBL1_DMSO_200M_050219_1,14961,SQWEDIHVV True True SQWEDIHVV 73.693023 556.772448718548 17094250.0 14954.0 ENSG00000075884|ENST00000295095|ARHGAP15;;ENST00000549436.5_1_2:144276854-144461094:+|nuORF 5.196527163187663 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14962 73.695 80.0 1390500.0 25 0 127050.0 + 21634 LPLARIATV 9 125 477.3108331829908 952.6071134327816 2 477.3107177615166 MULTI CID FTMS 0 0 0 14954 1294145.0 0.198464008543731 10 -0.9189682006835938 8 Unmodified _LPLARIATV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 38.17557092003332 0.0854718145212029 3 {I|L}P{I|L}KY{I|L}PG 8 5 51.196 0.0 0.0 5.3743 0.0 0.0 0.0 68.05140863590077 68.05140863590077 31.362912940605483 0.0 0.0 0.0 0 0.6237125054200234 1.6989700043360187 0.0 0.0 {I|L}P{I|L}KY{I|L}PG 5.3743 - 380 + 1 1.119 91506.3 1.0 9382 5578 14954 HBL1_DMSO_200M_050219_1,14962 HBL1_DMSO_200M_050219_1,14962,LPLARIATV True True LPLARIATV 73.694846 477.310717761517 184488876.0 14954.0 nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27 4.818387508392334 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14963 73.696 61.0 1087800.0 25 0 111340.0 + 38258 TPVRLPSI 8 87 441.7740672237752 881.5335815143503 2 441.7741271853447 MULTI CID FTMS 0 0 0 14954 843878.1875 0.3673023223473484 -4 0.2191314697265625 9 Unmodified _TPVRLPSI_ ENSG00000125347|ENST00000245414|IRF1;ENST00000472045.1_1_5:131819645-131819816:-|nuORF 38.17557092003332 0.2648138137323925 3 TPVR{I|L}PS{I|L} 8 0 + 77.3 0.0 0.0 8.7688 8.7688 96.219 0.0 0.0 0.0 55.42796583575644 21.453650195120844 21.453650195120844 13.922815857436532 0 1.242992819099939 2.0 0.8494850021680094 0.0 + + TPVR{I|L}PS{I|L};TPV{[TV]|[{I|L}S]}[RP]{I|L};[TP]VR{I|L}T[VP];[TP]VR{I|L}PVT;[TP]VR[VP]{I|L}T;[VP]RT{I|L}T[VP];[VP]RT{I|L}PVT;[VP]R{I|L}TT[VP];[VP]R{I|L}TPVT;[PS]{I|L}R{I|L}T[VP] 8.7688;7.1894;5.4878;5.2187;4.658;3.7913;3.5222;3.4498;3.1807;3.0453 +;-;-;-;-;-;-;-;-;- + 184 + 1 1.119 59559.9 1.0 9383 5578 14954 HBL1_DMSO_200M_050219_1,14963 HBL1_DMSO_200M_050219_1,14963,TPVRLPSI False True TPVRLPSI 73.69634 441.774127185345 83891700.0 14954.0 ENSG00000125347|ENST00000245414|IRF1;;ENST00000472045.1_1_5:131819645-131819816:-|nuORF 5.84054438273112 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14964 73.7 204.0 943240.0 25 0 69861.0 + 17815 KQLDDLKVEL 10 172 600.8452342256743 1199.6759155181485 2 600.8453857302666 MULTI CID FTMS 0 0 0 14954 827516.1875 0.0024626858388221 32 -2.4819793701171875 10 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 132.56650051923685 0.0002113199001681 3 [AG]K{I|L}DD{I|L}KVE{I|L} 11 3 + 94.034 0.0 0.0 7.8383 7.8383 86.981 0.0 0.0 0.0 1.1081175888416368 49.63842916451264 1.1081175888416368 3.683273843927026 0 2.7477861090009466 1.0457574905606752 0.9604093769761876 1.2786596949921218 [AG]K{I|L}DD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L};[KQ]{I|L}DD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}SRQ{I|L}KVE{I|L};[AG]K{I|L}DD{I|L}VKE{I|L};{[QN]|[E{I|L}]|[KN]}KND{I|L}KVE{I|L};[Q{I|L}]KDD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}VKE{I|L};[KQ]{I|L}DD{I|L}VKE{I|L} 7.8383;7.5313;7.5206;7.3951;7.375;7.3603;7.1985;7.1629;7.0533;7.0427 -;-;+;-;-;-;-;-;-;- + 25766 1 1.119 139330.7 1.0 9384 5578 14954 HBL1_DMSO_200M_050219_1,14964 HBL1_DMSO_200M_050219_1,14964,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14965 73.703 119.0 892230.0 25 0 77543.0 + 1679 ALPDSPSIAP 10 129 484.25839615362605 966.502239374052 2 484.2588378787041 MULTI CID FTMS 0 0 0 14954 679122.6875 0.0016046875961693 83 -6.5822296142578125 11 Unmodified _ALPDSPSIAP_ REV__ENST00000327619.9_1_20:45816714-45817023:+|nuORF 16.942295170755138 0.5632667538960775 3 {I|L}CTV 4 -1 24.579 0.0 0.0 2.5431 0.0 0.0 532.2852116414334 0.0 532.2852116414334 0.0 -2.867909902192362 -2.867909902192362 0.0 0 0.0 0.0 0.2887254899964357 0.0 {I|L}CTV 2.5431 - 596 + 1 1.119 86407.4 1.0 9385 5578 14954 HBL1_DMSO_200M_050219_1,14965 HBL1_DMSO_200M_050219_1,14965,ALPDSPSIAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14966 73.705 104.0 528630.0 25 0 72758.0 + 17825 KQLDDLKVEL 10 88 400.8994160702367 1199.67641881091 3 400.8995544314384 MULTI CID FTMS 0 0 0 14954 526442.9375 0.0025472713395928 34 -2.6147918701171875 12 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 55.50274090549119 0.048383292844968 3 [AG]K{I|L}DD{I|L}K 8 6 46.91 0.0 0.0 3.9103 0.0 0.0 0.0 356.1834127896788 356.1834127896788 32.71225010665418 0.0 0.0 0.0 0 0.5 0.7958800173440752 0.6747425010840047 1.110924374808178 [AG]K{I|L}DD{I|L}K 3.9103 - 365 1 1.119 44600.7 1.0 9386 5578 14954 HBL1_DMSO_200M_050219_1,14966 HBL1_DMSO_200M_050219_1,14966,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14967 73.708 136.0 678870.0 25 0 106630.0 + 20203 VPVETVLRV 9 124 506.8241964283972 1011.6338399235945 2 506.8243591189384 MULTI CID FTMS 0 0 0 14954 485996.53125 0.320634445918611 5 -0.4100875854492187 13 Unmodified _LLAQISALAL_ ENSG00000165684|ENST00000684778|SNAPC4 27.628801355627647 0.3479284626772844 3 {I|L}{I|L}AQE{I|L}VKV 9 6 + 74.752 0.0 0.0 7.3893 7.3893 91.438 0.0 0.0 0.0 39.80381264341851 9.843050114734808 9.843050114734808 9.208187539523736 0 1.1237125054200234 2.0 0.0 0.3494850021680094 {I|L}{I|L}AQE{I|L}VKV;{I|L}{I|L}A[AG]E{I|L}VKV;VVVQE{I|L}VKV;VVV[AG]E{I|L}VKV 7.3893;6.479;3.1389;2.2287 -;-;-;- 665 + 1 1.119 79269.0 1.0 9387 5578 14954 HBL1_DMSO_200M_050219_1,14967 HBL1_DMSO_200M_050219_1,14967,LLAQISALAL False False VPVETVLRV 73.707671 506.824359118938 1844032.875 14954.0 ENSG00000165684|ENST00000684778|SNAPC4 1.6992788811524708 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14968 73.713 290.0 130480.0 25 0 15097.0 + -1 CQFMSYYEWSL 11 71 765.3079671728844 1528.6013814125688 2 765.3086425662041 MULTI CID FTMS 0 0 0 14954 377318.5625 0.5395320883274104 5 -0.4100875854492187 14 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))QFM(Oxidation (M))SYYEWSL_ REV__ENSG00000064313|ENST00000378164|TAF2 3.2813086475875832 0.8596665074481906 3 {[VA]|[{I|L}G]}VE 4 -1 31.682 0.0 0.0 2.0726 0.0 0.0 0.0 1127.361366113994 1127.361366113994 9.916440611282624 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}VE 2.0726 - 32 1 1.119 34182.8 1.0 9388 5578 14954 HBL1_DMSO_200M_050219_1,14968 HBL1_DMSO_200M_050219_1,14968,CQFMSYYEWSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14969 73.718 289.0 261510.0 25 0 23755.0 + + 25852 YAIENVETNL 10 125 582.7896848796801 1163.56481682616 2 583.2901489138603 MULTI CID FTMS 0 0 0 14954 307697.28125 1.0 0 0.0 15 Unmodified _NLDYLYHNL_ nc|ENSG00000064419|Q9Y5L0-1|TNPO3;ENSG00000064419|ENST00000265388|TNPO3;nc|ENSG00000064419|Q9Y5L0-3|TNPO3;nc|ENSG00000064419|Q9Y5L0-5|TNPO3 15.847184025352805 0.4077185912009129 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENV 6 -1 31.661 0.0 0.0 2.721 0.0 0.0 0.0 471.20199879321007 471.20199879321007 11.237320992470742 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.5796896906561032 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENV 2.721 - 571 1 1.119 62799.5 1.0 9389 5578 14954 HBL1_DMSO_200M_050219_1,14969 HBL1_DMSO_200M_050219_1,14969,NLDYLYHNL False False YAIENVETNL 73.718329 583.29014891386 2156408.75 14954.0 nc|ENSG00000064419|Q9Y5L0-1|TNPO3;;ENSG00000064419|ENST00000265388|TNPO3;;nc|ENSG00000064419|Q9Y5L0-3|TNPO3;;nc|ENSG00000064419|Q9Y5L0-5|TNPO3 4.919978698094686 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14970 73.725 384.0 495080.0 25 0 28963.0 + 16564 SQVLQVPAV 9 192 470.2738205521857 938.5330881711716 2 470.7772704958916 MULTI CID FTMS 0 0 0 14954 252953.359375 0.7179265958541319 6 -0.5468063354492188 16 Unmodified _KDALSHLR_ nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;ENSG00000158987|ENST00000509018|RAPGEF6;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6 21.74664581756881 0.5868176546531598 3 {[QS]|[NT]}V{I|L}QV 6 7 40.79 0.0 0.0 4.3461 0.0 0.0 0.0 281.141827755409 281.141827755409 11.832049665589672 0.0 0.0 0.0 0 0.0 0.3767507096020995 0.9793395554607172 0.9604093769761876 {[QS]|[NT]}V{I|L}QV 4.3461 - 1488 1 1.119 146466.3 1.0 9390 5578 14954 HBL1_DMSO_200M_050219_1,14970 HBL1_DMSO_200M_050219_1,14970,KDALSHLR False False SQVLQVPAV 73.725215 470.777270495892 10339920.0 14954.0 nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;;ENSG00000158987|ENST00000509018|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6 5.885409673055013 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14971 73.733 460.0 243540.0 25 0 25748.0 + 12621 GVKFVAAN 8 167 403.2326519197718 0 403.2318908572197 PEAK CID FTMS 0 0 0 14954 234326.578125 0.8567191342286717 -13 0.7971572875976562 17 Unmodified _GVKFVAAN_ REV__ENSG00000138688|ENST00000679879|BLTP1;REV__nc|ENSG00000138688|Q2LD37-4|BLTP1;REV__nc|ENSG00000138688|Q2LD37-6|BLTP1;REV__nc|ENSG00000138688|Q2LD37-7|BLTP1;REV__nc|ENSG00000138688|Q2LD37|BLTP1 5.230669730166228 0.5807325378471833 3 H 1 -1 4.6041 0.0 0.0 0.57233 0.0 0.0 401.215199003803 263.1511324518188 664.3663314556218 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.57233 - 21 + 1 1.119 89334.0 1.0 9391 5578 14954 HBL1_DMSO_200M_050219_1,14971 HBL1_DMSO_200M_050219_1,14971,GVKFVAAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14972 73.74 382.0 116150.0 25 0 19487.0 -1 0 30 1115.4568119779815 3343.348606534145 3 1115.792529284954 MULTI CID FTMS 0 0 0 14954 202801.71875 1.0 0 0.0 18 3 M 1 -1 5.4846 0.0 0.0 0.16404 0.0 0.0 2538.982205020573 670.3229464166624 3209.3051514372355 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.16404 - 4 + 1 1.119 42176.6 1.0 9392 5578 14954 HBL1_DMSO_200M_050219_1,14972 HBL1_DMSO_200M_050219_1,14972, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14973 73.747 346.0 143900.0 25 0 7007.7 -1 0 84 963.7864004741408 2888.3373720226227 3 964.1213867068292 MULTI CID FTMS 0 0 0 14954 207364.765625 0.5947074430019259 -1 0.0810546875 19 3 [NP]{I|L}N[H{I|L}]TGV 9 -1 28.21 0.0 0.0 0.97669 0.0 0.0 0.0 1939.830327915454 1939.830327915454 15.022431204052326 0.0 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 [NP]{I|L}N[H{I|L}]TGV 0.97669 - 551 1 1.119 42759.6 1.0 9393 5578 14954 HBL1_DMSO_200M_050219_1,14973 HBL1_DMSO_200M_050219_1,14973, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14974 73.754 319.0 118920.0 25 0 13837.0 8349 ERVRLLRAEP 10 76 619.869359399643 1237.724165866086 2 619.8699828982353 MULTI CID FTMS 0 0 0 14954 158751.203125 0.1369156991633436 -4 0.2191314697265625 20 Unmodified _ERVRLLRAEP_ ENST00000470461.1_1_X:51636742-51638153:+|nuORF 3.2813086475875832 0.7114585191678878 3 {I|L} 1 9 9.8329 0.0 0.0 0.79443 0.0 0.0 1106.6290558580763 0.0 1106.6290558580763 0.0 4.348331157524967 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.79443 + + 28 + 1 1.119 36654.5 1.0 9394 5578 14954 HBL1_DMSO_200M_050219_1,14974 HBL1_DMSO_200M_050219_1,14974,ERVRLLRAEP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14976 73.758 30.0 1101000.0 25 0 39437.0 -1 LLMLDDQRLLL 11 75 679.8873050309804 1357.7600571287608 2 679.8876220583916 MULTI CID FTMS 0 0 0 14975 1868831.125 0.1883541394940344 6 -0.546051025390625 1 Oxidation (M) _LLM(Oxidation (M))LDDQRLLL_ ENSG00000177628|ENST00000368373|GBA1;ENST00000459805.5_1_1:155184905-155186549:-|nuORF;ENST00000473223.5_1_1:155184463-155187072:-|nuORF;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;nc|ENSG00000177628|P04062-2|GBA1;nc|ENSG00000177628|P04062-3|GBA1;nc|ENSG00000177628|P04062-4|GBA1;nc|ENSG00000177628|P04062-5|GBA1 16.149105407346934 0.6992268271266642 3 VPYE{I|L} 5 -1 70.943 0.0 0.0 5.225 0.0 0.0 0.0 753.4271334283811 753.4271334283811 28.54757507271316 0.0 0.0 0.0 0 1.5994850021680094 1.6989700043360187 0.0 0.0 VPYE{I|L} 5.225 - 656 + 1 1.119 32852.7 1.0 9395 5579 14975 HBL1_DMSO_200M_050219_1,14976 HBL1_DMSO_200M_050219_1,14976,LLMLDDQRLLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14977 73.759 29.0 1329000.0 25 0 128910.0 19707 LGMFHLLVAV 10 74 550.3217983615174 1098.629043789835 2 550.3215820193291 MULTI CID FTMS 0 0 0 14975 3097422.5 0.7451746329472021 2 -0.17193603515625 2 Unmodified _LGMFHLLVAV_ ENSG00000132676|ENST00000368336|DAP3;ENST00000462978.1_1_1:155697409-155701908:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3 18.13498045792455 0.5432546531930572 3 {[VA]|[{I|L}G]}EE{I|L}K{I|L}QAV 10 5 + 58.913 0.0 0.0 5.3624 5.3624 85.057 0.0 0.0 0.0 7.014224667125717 39.24742501084005 7.014224667125717 9.164539485499256 0 0.9247425010840048 1.3010299956639813 0.0 0.0 {[VA]|[{I|L}G]}EE{I|L}K{I|L}QAV;{[VA]|[{I|L}G]}EE{I|L}K{I|L}[AG]AV;[QA][WR]K{I|L}QAV;{[VA]|[{I|L}G]}Q{[QD]|[EN]|[WG]|[KD]|[RS]}KRRV;{[VA]|[{I|L}G]}AG{[QD]|[EN]|[WG]|[KD]|[RS]}KRRV;[QA][WR]K{I|L}[AG]AV;[Q{I|L}]G{[QD]|[EN]|[WG]|[KD]|[RS]}KRRV;[QA]V{[QD]|[EN]|[WG]|[KD]|[RS]}KRRV 5.3624;4.5282;3.3978;2.88;2.8384;2.5597;1.6958;1.51 -;-;-;-;-;-;-;- 208 1 1.119 36442.2 1.0 9396 5579 14975 HBL1_DMSO_200M_050219_1,14977 HBL1_DMSO_200M_050219_1,14977,LGMFHLLVAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14978 73.76 24.0 2646500.0 25 0 333400.0 34038 SLKQETQGL 9 100 502.27585584449577 1002.5371587557916 2 502.7757140994072 MULTI CID FTMS 0 0 0 14975 2292259.25 0.94328842040721 1 -0.0951156616210937 3 Unmodified _SLKQETQGL_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;ENST00000493695.1_1_3:160132272-160134257:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 26.88365393820708 0.1891292719743517 3 {[DA]|[EG]}{I|L}M 4 7 33.188 0.0 0.0 3.3104 0.0 0.0 0.0 569.3257079103415 569.3257079103415 -0.3090281539735429 0.0 -0.3090281539735429 0.0 0 0.0 2.0 0.0 0.0 {[DA]|[EG]}{I|L}M 3.3104 - 368 1 1.119 54488.1 1.0 9397 5579 14975 HBL1_DMSO_200M_050219_1,14978 HBL1_DMSO_200M_050219_1,14978,SLKQETQGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14979 73.761 55.0 2369000.0 25 0 235430.0 + 32580 SAVELPKI 8 97 428.7607059775943 855.5068590219886 2 428.7606689333916 MULTI CID FTMS 0 0 0 14975 2255834.75 1.0 0 0.0 4 Unmodified _SAVELPKI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-4|BRCC3;nc|ENSG00000185515|P46736|BRCC3 52.268347100219714 0.1285778651304833 3 {[SA]|[TG]}VE{I|L}PK{I|L} 8 0 + 73.739 0.0 0.0 8.6193 8.6193 95.901 0.0 0.0 0.0 56.537705977121774 7.944539621753535 7.944539621753535 13.429089686793816 0 1.0356668758921828 2.0 0.4247425010840047 0.2302046884880938 + + {[SA]|[TG]}VE{I|L}PK{I|L};{[SA]|[TG]}VE{I|L}{I|L}KP;[KP]{I|L}{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]K{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8.6193;7.0496;0.49387;0.16272 +;-;-;- + 139 + 1 1.119 110403.1 1.0 9398 5579 14975 HBL1_DMSO_200M_050219_1,14979 HBL1_DMSO_200M_050219_1,14979,SAVELPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14980 73.763 26.0 771570.0 25 0 62892.0 -1 LMVVSLLETV 10 53 560.3221297725755 1118.629706611951 2 560.3223144412041 MULTI CID FTMS 0 0 0 14975 1705360.125 0.3242500923347208 11 -0.9614105224609376 5 Oxidation (M) _LM(Oxidation (M))VVSLLETV_ ENSG00000178084|ENST00000318351|HTR3C 3.944395688203298 0.708391353636983 3 D 1 -1 0.9691 0.0 0.0 0.086633 0.0 0.0 918.5125476537464 82.06691156558827 1000.5794592193346 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.086633 - 5 + 1 1.119 23402.1 1.0 9399 5579 14975 HBL1_DMSO_200M_050219_1,14980 HBL1_DMSO_200M_050219_1,14980,LMVVSLLETV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14981 73.764 70.0 1084500.0 25 0 255480.0 + -1 IVMVARVL 8 80 458.7878679525143 915.5611829718288 2 458.7877380251884 MULTI CID FTMS 0 0 0 14975 1467109.5 0.2095504150738203 6 -0.546051025390625 6 Oxidation (M) _IVM(Oxidation (M))VARVL_ REV__ENST00000488751.1_1_7:99156525-99158253:+|nuORF 6.354104778181461 0.7857632046190106 3 {I|L} 1 -1 12.474 0.0 0.0 1.3625 0.0 0.0 784.4660729638193 0.0 784.4660729638193 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3625 + + 14 + 1 1.119 66991.7 1.0 9400 5579 14975 HBL1_DMSO_200M_050219_1,14981 HBL1_DMSO_200M_050219_1,14981,IVMVARVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14982 73.769 224.0 938280.0 25 0 82188.0 + 22321 LPSHGVPLI 9 171 466.7819373338645 931.5493217345288 2 466.7819091677666 MULTI CID FTMS 0 0 0 14975 1093483.375 0.0563254333158027 11 -0.9614105224609376 7 Unmodified _LPSHGVPLI_ ENSG00000089053|ENST00000261819|ANAPC5;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5 42.09456458481378 0.0639583784996157 3 [{I|L}P][HS]GVP{I|L}{I|L} 9 0 + 54.57 0.0 0.0 5.858 5.858 88.58 0.0 0.0 0.0 2.802718440054761 30.888061296399968 2.802718440054761 11.007112333562858 0 1.1382104921644451 1.6989700043360187 0.2887254899964357 0.0 + + [{I|L}P][HS]GVP{I|L}{I|L};{[SA]|[TG]}[YR]{I|L}P{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}C]|[YS]}{I|L}P{I|L}{I|L};[{I|L}P][HS]GPV{I|L}{I|L};{[SA]|[TG]}[YR]P{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}C]|[YS]}P{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}[HV]PSP{I|L}{I|L};[{I|L}P][PS]{[HG]|PP}V{I|L}{I|L};[{I|L}P]{[CA]|SS}[R{M(Oxidation (M))|F}]{I|L}{I|L};[VP][HT]GVP{I|L}{I|L} 5.858;4.6764;4.6493;4.365;3.5066;3.4795;3.3402;3.0835;3.0343;2.9607 +;-;-;-;-;-;-;-;-;- + 1372 1 1.119 165117.6 1.0 9401 5579 14975 HBL1_DMSO_200M_050219_1,14982 HBL1_DMSO_200M_050219_1,14982,LPSHGVPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14983 73.774 276.0 381520.0 25 0 104240.0 -1 0 42 1162.797886063532 3485.371828790796 3 1163.461596667767 MULTI CID FTMS 0 0 0 14975 1010992.6875 0.0086853352568812 20 -1.6480941772460938 8 3 E 1 -1 6.9897 0.0 0.0 0.20054 0.0 0.0 2829.143591078092 524.1634941731327 3353.3070852512246 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20054 - 23 + 1 1.119 91826.5 1.0 9402 5579 14975 HBL1_DMSO_200M_050219_1,14983 HBL1_DMSO_200M_050219_1,14983, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14984 73.776 102.0 1118200.0 25 0 118890.0 + 1396 ALATLIHQV 9 133 483.29249065706034 964.5704283809208 2 483.2931701540947 MULTI CID FTMS 0 0 0 14975 825640.5 1.0 0 0.0 9 Unmodified _ALATLIHQV_ ENSG00000111652|ENST00000543155|COPS7A 49.93300154707207 0.0405168250806675 3 [{I|L}A]AT{I|L}{I|L}HQV 9 0 + 70.543 0.0 0.0 7.3134 7.3134 88.03 0.0 0.0 0.0 27.147642715192504 5.797835966168108 5.797835966168108 5.797835966168108 0 0.9163865622122672 2.0 0.3807196863200844 0.25 + + [{I|L}A]AT{I|L}{I|L}HQV;[{I|L}A]AT{I|L}{I|L}HN{I|L};[{I|L}A]AT{I|L}{I|L}HAGV;[{I|L}A]AT{I|L}{I|L}HGG{I|L};[{I|L}A]AT{I|L}[YK]SV;[{I|L}A]T[H{I|L}]GAVA{I|L};[{I|L}A]T[H{I|L}]QVA{I|L};[{I|L}A]AT[HV]AVA{I|L};[{I|L}A]TA[HV]AVA{I|L};[{I|L}A]A[RH][W{I|L}]V 7.3134;6.7123;6.171;5.4985;4.8174;4.3604;4.1779;3.7188;3.6938;3.1097 +;-;-;-;-;-;-;-;-;- + 954 + 1 1.119 89650.4 1.0 9403 5579 14975 HBL1_DMSO_200M_050219_1,14984 HBL1_DMSO_200M_050219_1,14984,ALATLIHQV True True ALATLIHQV 73.775835 483.293170154095 12653590.0 14975.0 ENSG00000111652|ENST00000543155|COPS7A 6.20201301574707 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14985 73.778 79.0 956940.0 25 0 110010.0 + 40254 VGSWLLSTL 9 112 488.2792661744117 974.5439794156234 2 488.2792541384697 MULTI CID FTMS 0 0 0 14975 875871.0625 0.0986368278433745 11 -0.9614105224609376 10 Unmodified _VGSWLLSTL_ ENST00000520635.5_1_8:82644498-82644591:-|nuORF 34.10243960390752 0.1078313939113124 3 {I|L}ST{I|L} 4 5 34.412 0.0 0.0 3.5311 0.0 0.0 542.2831288068375 0.0 542.2831288068375 0.0 18.927900303521312 0.0 0.0 0 0.5 0.0 0.5 0.0 + {I|L}ST{I|L} 3.5311 + + 296 1 1.119 62276.6 1.0 9404 5579 14975 HBL1_DMSO_200M_050219_1,14985 HBL1_DMSO_200M_050219_1,14985,VGSWLLSTL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 14986 73.779 67.0 1323300.0 25 0 179700.0 + 45909 YYTPDRMVL 9 90 579.2864421085376 1156.558331283875 2 579.2859985232353 MULTI CID FTMS 0 0 0 14975 783801.625 0.2974796828117123 -3 0.2430496215820312 11 Unmodified _YYTPDRMVL_ ENSG00000165688|ENST00000371717|PMPCA;ENST00000462616.1_1_9:139311477-139313651:+|nuORF;nc|ENSG00000165688|Q10713-2|PMPCA 39.94969957227396 0.0757326808254658 3 YYTPD{[WT]|[RM]}V{I|L} 9 0 + 78.326 0.0 0.0 6.7723 6.7723 91.833 0.0 0.0 0.0 64.34623773781176 7.624562618571247 7.624562618571247 12.461987796517704 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + + YYTPD{[WT]|[RM]}V{I|L};YYT{I|L}[EC][RP]{I|L};YYTP[{I|L}P]W{[MS]|[{M(Oxidation (M))|F}A]};YYT{I|L}{[HG]|PP}W{[MS]|[{M(Oxidation (M))|F}A]};YYT{[QV]|[N{I|L}]|[RA]|[KV]}S{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[RE]|[WV]}M{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V]Y;[C(Carbamidomethyl (C))R][HA]D{[WT]|[RM]}V{I|L};Y{I|L}[YT]{[HG]|PP}W{[MS]|[{M(Oxidation (M))|F}A]};{[RE]|[WV]}M[PS]V[Y{I|L}]Y;{[RE]|[WV]}{[RE]|[WV]}E[Y{I|L}]Y 6.7723;5.6948;5.1753;4.9382;4.6305;1.1135;0.95909;0.70093;0.48371;0.44415 +;-;-;-;-;-;-;-;-;- + 204 + 1 1.119 70501.7 1.0 9405 5579 14975 HBL1_DMSO_200M_050219_1,14986 HBL1_DMSO_200M_050219_1,14986,YYTPDRMVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14987 73.781 102.0 979410.0 25 0 70938.0 15666 IQMRRPFL 8 118 530.8100332975487 1059.6055136618972 2 530.8101684451103 MULTI CID FTMS 0 0 0 14975 666234.1875 0.6249085184908136 1 -0.0951156616210937 12 Unmodified _IQMRRPFL_ ENSG00000184205|ENST00000375442|TSPYL2;ENST00000556808.1_1_X:53112313-53114116:+|nuORF 9.347437153973935 0.7675937258251505 3 {I|L} 1 7 11.783 0.0 0.0 1.112 0.0 0.0 928.510418912677 0.0 928.510418912677 0.0 2.45043115942015 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.112 + + 103 + 1 1.119 80942.9 1.0 9406 5579 14975 HBL1_DMSO_200M_050219_1,14987 HBL1_DMSO_200M_050219_1,14987,IQMRRPFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14988 73.785 153.0 973840.0 25 0 138440.0 + + -1 TVLSGHWSV 9 151 493.2617028416537 984.5088527501074 2 493.2593261599541 MULTI CID FTMS 0 0 0 14975 496423.59375 1.0 0 0.0 13 Oxidation (M) _SLGHTVM(Oxidation (M))PK_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000487364.1_1_19:19771386-19774475:-|nuORF 26.88365393820708 0.1891292719743517 3 {[HG]|PP}S{I|L}WSV{I|L}S 9 -1 + 41.753 0.0 0.0 4.241 4.241 73.846 0.0 0.0 0.0 4.137342758552691 23.51911637759414 4.137342758552691 2.396518287104428 0 0.0 0.0 0.8600233437409719 0.0 {[HG]|PP}S{I|L}WSV{I|L}S;{[HG]|PP}SW{I|L}SV{I|L}S;{[HG]|PP}S{I|L}C(Carbamidomethyl (C)){I|L}V{I|L}S;{[HG]|PP}SWS{I|L}V{I|L}S;{[HG]|PP}WS{I|L}SV{I|L}S;[WH]GS{I|L}SV{I|L}S;{[HG]|PP}S{I|L}WR{[ET]|[MV]};{[QV]|[N{I|L}]|[RA]|[KV]}[HC]{I|L}SV{I|L}S;{[HG]|PP}SW{I|L}R{[ET]|[MV]};{[HG]|PP}S{I|L}[CG]{I|L}V{I|L}S 4.241;3.9976;3.4506;3.2072;3.1426;3.0442;2.7617;2.665;2.5182;2.5153 -;-;-;-;-;-;-;-;-;- 1238 1 1.119 113592.0 1.0 9407 5579 14975 HBL1_DMSO_200M_050219_1,14988 HBL1_DMSO_200M_050219_1,14988,SLGHTVMPK False False TVLSGHWSV 73.784497 493.259326159954 4049037.0 14975.0 ENSG00000105726|ENST00000357324|ATP13A1;;ENST00000487364.1_1_19:19771386-19774475:-|nuORF 4.663206259409587 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14989 73.791 385.0 229070.0 25 0 18112.0 40423 VIHAKRVTIM 10 146 584.3569103075322 1166.6992676818645 2 584.3557006716728 MULTI CID FTMS 0 0 0 14975 305459.15625 0.2802478495211868 -2 0.1528244018554687 14 Unmodified _VIHAKRVTIM_ ENSG00000168148|ENST00000366696|H3-4 4.3292370932331545 0.7066112369704343 3 [{I|L}V][HT]EDP{I|L}T 9 6 27.915 0.0 0.0 2.3926 0.0 0.0 0.0 158.17635443407053 158.17635443407053 14.269856214892371 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V][HT]EDP{I|L}T 2.3926 - 517 1 1.119 70482.6 1.0 9408 5579 14975 HBL1_DMSO_200M_050219_1,14989 HBL1_DMSO_200M_050219_1,14989,VIHAKRVTIM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14990 73.798 394.0 360770.0 25 0 37790.0 -1 0 150 607.3458130830791 606.338536616479 1 607.3463012576103 MULTI CID FTMS 0 0 0 14975 274414.96875 1.0 0 0.0 15 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}Q{I|L} 5 -1 + 52.792 0.0 0.0 8.7066 8.7066 94.953 0.0 0.0 0.0 7.380521827513533 7.380521827513533 7.380521827513533 9.542425094393252 0 0.9604093769761876 1.3979400086720375 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}Q{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[AG]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q{I|L}{I|L};[PS]KY{I|L};[{I|L}A]YQ{I|L};[Q{I|L}]AY{I|L};[{I|L}A]GAY{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}Q{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]{I|L}{I|L};[VG][VG]Y{I|L} 8.7066;7.1329;6.4295;5.9804;5.4277;5.2202;5.035;4.9548;4.8557;4.4339 -;-;-;-;-;-;-;-;-;- 275 1 1.119 105374.4 1.0 9409 5579 14975 HBL1_DMSO_200M_050219_1,14990 HBL1_DMSO_200M_050219_1,14990, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 14991 73.808 542.0 194130.0 25 0 16436.0 + + 22424 ASIGPLTGV 9 163 407.7371639075248 813.4597748818496 2 407.7371093630791 MULTI CID FTMS 0 0 0 14975 253952.734375 0.1461940396995009 -3 0.2430496215820312 16 Unmodified _LPTGGLSAV_ ENST00000451399.5_1_6:43152048-43155921:+|nuORF;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43152048-43164205:+|nuORF;nc|ENSG00000112659|Q8IWT3-3|CUL9 36.04419817259434 0.0971720506436186 3 [{I|L}P]GTMN 6 -1 27.853 0.0 0.0 3.4241 0.0 0.0 0.0 197.14950811843087 197.14950811843087 0.2018122933698478 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.5 0.0 [{I|L}P]GTMN 3.4241 - 469 1 1.119 86311.8 1.0 9410 5579 14975 HBL1_DMSO_200M_050219_1,14991 HBL1_DMSO_200M_050219_1,14991,LPTGGLSAV False False ASIGPLTGV 73.808002 407.737109363079 3579438.75 14975.0 ENST00000451399.5_1_6:43152048-43155921:+|nuORF;;ENSG00000112659|ENST00000252050|CUL9;;ENST00000515773.5_1_6:43152048-43164205:+|nuORF;;nc|ENSG00000112659|Q8IWT3-3|CUL9 1.2202070156733196 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14992 73.816 441.0 208580.0 25 0 22054.0 6200 DTERRYHLRY 10 146 704.8560006261735 0 704.9555541872978 PEAK CID FTMS 0 0 0 14975 45684.8984375 0.73100543347478 -1 0.0717697143554687 17 Unmodified _DTERRYHLRY_ ENSG00000132478|ENST00000589666|UNK 5.731851221503515 0.3961065659209837 3 QQ 2 10 12.959 0.0 0.0 0.92057 0.0 0.0 829.3810500045231 319.1778963678344 1148.5589463723577 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 QQ 0.92057 - 162 + 1 1.119 69950.7 1.0 9411 5579 14975 HBL1_DMSO_200M_050219_1,14992 HBL1_DMSO_200M_050219_1,14992,DTERRYHLRY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14993 73.825 490.0 151370.0 25 0 7645.4 8210 EPTKPPYSY 9 91 1081.518040879585 1080.510764412985 1 1082.524340808392 MULTI CID FTMS 0 0 0 14975 210153.0625 1.0 0 0.0 18 Unmodified _EPTKPPYSY_ ENSG00000179772|ENST00000375978|FOXS1 13.042465956692816 0.4836390050082244 3 [WD]Q{M(Oxidation (M))|F}{I|L}SA[KS] 9 8 + 19.332 0.0 0.0 1.7891 1.7891 67.767 0.0 0.0 0.0 8.551930644247502 7.147642715192507 7.147642715192507 1.426675035687314 0 0.0 0.0 0.0 0.0 [WD]Q{M(Oxidation (M))|F}{I|L}SA[KS];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}D{[MS]|[{M(Oxidation (M))|F}A]}SA[KS];{[QD]|[EN]|[WG]|[KD]|[RS]}VE{[MS]|[{M(Oxidation (M))|F}A]}SA[KS];[WD][AG]{M(Oxidation (M))|F}{I|L}SA[KS];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}DVCCA[KS];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HEVD{I|L}[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}VEVCCA[KS];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HEVEV[QP] 1.7891;1.6571;1.2888;0.9369;0.82127;0.49057;0.45298;0.12228 -;-;-;-;-;-;-;- 370 + 1 1.119 52407.3 1.0 9412 5579 14975 HBL1_DMSO_200M_050219_1,14993 HBL1_DMSO_200M_050219_1,14993,EPTKPPYSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14994 73.835 510.0 282880.0 25 0 21622.0 -1 VPTMLLKSL 9 187 509.305744813106 1016.596936693012 2 509.3083984255791 MULTI CID FTMS 0 0 0 14975 171837.78125 0.564518236913096 5 -0.47503662109375 19 Oxidation (M) _VPTM(Oxidation (M))LLKSL_ ENSG00000134249|ENST00000369400|ADAM30;nc|ENSG00000134249|Q9UKF2-2|ADAM30 16.942295170755138 0.3780752226737986 3 {I|L} 1 -1 16.03 0.0 0.0 1.5768 0.0 0.0 885.5018114262135 0.0 885.5018114262135 0.0 1.0816614116081702 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.5768 + + 382 + 1 1.119 117185.6 1.0 9413 5579 14975 HBL1_DMSO_200M_050219_1,14994 HBL1_DMSO_200M_050219_1,14994,VPTMLLKSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14995 73.849 800.0 190610.0 25 0 15488.0 + 40348 VHPLSFFCF 9 187 366.1802123537132 1095.5188076613397 3 366.5142394900322 MULTI CID FTMS 0 0 0 14975 171459.921875 0.4659449879758433 7 -0.603607177734375 20 Unmodified _VHPLSFFCF_ REV__ENSG00000163755|ENST00000296051|HPS3;REV__ENST00000486530.1_1_3:148847510-148871436:+|nuORF;REV__nc|ENSG00000163755|Q969F9-2|HPS3 7.910154910731844 0.6385446671287552 3 {[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V[HA]HV 9 -1 {[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V[HA]H + + 11.99 -7.15 -0.73076 1.0944 1.0944 48.388 0.0 0.0 0.0 0.0 -8.979400086720375 -8.979400086720375 0.0 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V[HA]HV 1.0944 - 177 + 1 1.119 125925.7 0.9300000071525574 9414 5579 14975 HBL1_DMSO_200M_050219_1,14995 HBL1_DMSO_200M_050219_1,14995,VHPLSFFCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 14997 73.853 6.0 10755000.0 25 0 1379600.0 + 44053 YIPTELDQV 9 74 539.276352257802 1076.538151582404 2 539.2763549685478 MULTI CID FTMS 0 0 0 14996 6619305.5 0.7630844087573468 2 -0.1884841918945312 1 Unmodified _YIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 26.88365393820708 0.1891292719743517 3 [TP]E{I|L}DQ 6 3 43.549 0.0 0.0 4.0453 0.0 0.0 0.0 390.2033486861728 390.2033486861728 21.313506577119625 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.110924374808178 0.0 + [TP]E{I|L}DQ 4.0453 + + 209 1 1.133 56453.4 1.0 9415 5580 14996 HBL1_DMSO_200M_050219_1,14997 HBL1_DMSO_200M_050219_1,14997,YIPTELDQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14998 73.854 21.0 3557500.0 25 0 520100.0 + 30283 QYPGRSLVF 9 84 533.7891417573512 1065.5637305815023 2 533.7889892458916 MULTI CID FTMS 0 0 0 14996 2089883.75 0.3498125260438613 2 -0.1884841918945312 2 Unmodified _QYPGRSLVF_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 30.63653989081413 0.1413794767160703 3 [YQ]P 3 6 33.345 0.0 0.0 3.1293 0.0 0.0 0.0 674.3640841119749 674.3640841119749 16.35512976221092 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 + [YQ]P 3.1293 + + 46 + 1 1.133 63803.2 1.0 9416 5580 14996 HBL1_DMSO_200M_050219_1,14998 HBL1_DMSO_200M_050219_1,14998,QYPGRSLVF False True QYPGRSLVF 73.854016 533.788989245892 205133088.0 14996.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 7.404009660085042 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 14999 73.855 13.0 2029100.0 25 0 205390.0 + 8697 EVKNRGIDL 9 62 522.296337439604 1042.578121946008 2 522.2968017458916 MULTI CID FTMS 0 0 0 14996 1331370.25 0.353610434848431 7 -0.6340484619140625 3 Unmodified _EVKNRGIDL_ REV__ENSG00000130349|ENST00000311381|MTRES1 7.289230182591677 0.6602208344931196 3 {I|L}RW 3 -1 13.188 0.0 0.0 1.2649 0.0 0.0 349.17060349073296 235.11931787662343 584.2899213673564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}RW 1.2649 - 46 + 1 1.133 27250.4 1.0 9417 5580 14996 HBL1_DMSO_200M_050219_1,14999 HBL1_DMSO_200M_050219_1,14999,EVKNRGIDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15000 73.856 34.0 1072300.0 25 0 100290.0 -1 GLCLCLCCV 9 60 549.2352117364615 1096.4558705397228 2 549.2359496951103 MULTI CID FTMS 0 0 0 14996 713389.75 0.3402158606225183 2 -0.1884841918945312 4 3 Carbamidomethyl (C) _GLC(Carbamidomethyl (C))LC(Carbamidomethyl (C))LC(Carbamidomethyl (C))CV_ ENST00000458210.7_1_19:19645671-19648330:+|nuORF 5.230669730166228 0.7320841359114558 3 [PA]E[KP]{M(Oxidation (M))|F}{I|L}Q 8 -1 22.573 0.0 0.0 2.0587 0.0 0.0 0.0 182.9208723309916 182.9208723309916 7.511394160003562 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.0 [PA]E[KP]{M(Oxidation (M))|F}{I|L}Q 2.0587 - 164 1 1.133 38810.4 1.0 9418 5580 14996 HBL1_DMSO_200M_050219_1,15000 HBL1_DMSO_200M_050219_1,15000,GLCLCLCCV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15001 73.858 54.0 1468300.0 25 0 223200.0 + 3844 DAKILSNVI 9 112 486.7906182720745 971.566683610949 2 486.7900268435478 MULTI CID FTMS 0 0 0 14996 648903.5625 0.2173444590153117 -2 0.1668853759765625 5 Unmodified _DAKILSNVI_ ENSG00000174485|ENST00000443035|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A;nc|ENSG00000174485|Q7Z401|DENND4A 71.92227651296345 0.0203558744033348 3 {[DA]|[EG]}K{I|L}{I|L}SNV{I|L} 9 0 + 59.993 0.0 0.0 6.1749 6.1749 84.333 0.0 0.0 0.0 5.351132016973487 10.330145895351848 5.351132016973487 5.351132016973487 0 0.7429928190999391 1.154901959985743 1.6906140654642814 0.3807196863200844 + + {[DA]|[EG]}K{I|L}{I|L}SNV{I|L};{[TV]|[{I|L}S]}N{I|L}{I|L}SNV{I|L};{[DA]|[EG]}K{I|L}{I|L}SGGV{I|L};[TA]AA{I|L}{I|L}SNV{I|L};[NS]{I|L}{I|L}{I|L}SNV{I|L};{[TV]|[{I|L}S]}N{I|L}{I|L}SGGV{I|L};{[TV]|[{I|L}S]}GG{I|L}{I|L}SNV{I|L};{[NV]|[RG]}T{I|L}{I|L}SNV{I|L};[KG]E{I|L}{I|L}SNV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}{I|L}SNV{I|L} 6.1749;5.6241;5.2271;4.9391;4.8576;4.6763;4.6763;4.4951;4.4709;4.448 +;-;-;-;-;-;-;-;-;- + 860 1 1.133 66528.5 1.0 9419 5580 14996 HBL1_DMSO_200M_050219_1,15001 HBL1_DMSO_200M_050219_1,15001,DAKILSNVI True True DAKILSNVI 73.857751 486.790026843548 15609432.0 14996.0 nc|ENSG00000174485|Q7Z401|DENND4A;;ENSG00000174485|ENST00000443035|DENND4A;;nc|ENSG00000174485|Q7Z401-2|DENND4A 4.132013320922852 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15002 73.865 417.0 933350.0 25 0 312860.0 + 15605 IPYSPDVQI 9 116 1031.5412045481587 1030.5339280815588 1 1033.548022449017 MULTI CID FTMS 0 0 0 14996 539466.1875 0.9383617907135062 -2 0.1668853759765625 6 Unmodified _IPYSPDVQI_ ENSG00000127463|ENST00000477853|EMC1;ENST00000461353.1_1_1:19545799-19546215:-|nuORF;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1 49.93300154707207 0.0405168250806675 3 [DP]V{I|L}{M(Oxidation (M))|F}SDQ 8 7 47.076 0.0 0.0 4.5681 0.0 0.0 0.0 126.06677549120026 126.06677549120026 1.9826821793639624 0.0 0.0 0.0 0 0.0 1.0 1.0 0.2742275032520141 [DP]V{I|L}{M(Oxidation (M))|F}SDQ 4.5681 - 9511 1 1.133 246694.1 1.0 9420 5580 14996 HBL1_DMSO_200M_050219_1,15002 HBL1_DMSO_200M_050219_1,15002,IPYSPDVQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15003 73.868 136.0 708180.0 25 0 58379.0 + 38688 TTMLVEIGNCM 11 118 606.2781260152229 1210.5416990972458 2 606.2786132693291 MULTI CID FTMS 0 0 0 14996 430542.4375 0.1176097143697324 -5 0.348724365234375 7 Unmodified _TTMLVEIGNCM_ REV__ENST00000235382.6_1_1:192781079-192781220:+|nuORF 14.40537977576856 0.7354982482299568 3 {I|L}PSM 4 -1 38.142 0.0 0.0 3.1508 0.0 0.0 764.3222909935333 0.0 764.3222909935333 0.0 13.694028404633158 0.0 0.0 0 0.8807196863200843 0.0 0.5891368308784531 0.0 {I|L}PSM 3.1508 - 481 + 1 1.133 73038.2 1.0 9421 5580 14996 HBL1_DMSO_200M_050219_1,15003 HBL1_DMSO_200M_050219_1,15003,TTMLVEIGNCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15004 73.876 469.0 697110.0 25 0 93404.0 + 34216 SLPKKLALL 9 176 491.8367919740146 981.6590310148292 2 491.8369628787041 MULTI CID FTMS 0 0 0 14996 416125.84375 0.4359642041243387 -2 0.1668853759765625 8 Unmodified _SLPKKLALL_ ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF 30.63653989081413 0.1413794767160703 3 S{I|L}PK 4 5 52.423 0.0 0.0 5.3402 0.0 0.0 0.0 553.3715577017704 553.3715577017704 15.626371246739057 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + S{I|L}PK 5.3402 + + 1417 + 1 1.133 243530.1 1.0 9422 5580 14996 HBL1_DMSO_200M_050219_1,15004 HBL1_DMSO_200M_050219_1,15004,SLPKKLALL False True SLPKKLALL 73.876287 491.836962878704 8287057.0 14996.0 ENST00000588858.5_1_19:13886394-13889009:+|nuORF;;ENSG00000104979|ENST00000588234|C19orf53 0.7584985097249349 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15005 73.881 228.0 448550.0 25 0 58899.0 + 8005 ILSKDGVLYV 10 131 553.8316687177116 1105.6487845022232 2 553.8267089724541 MULTI CID FTMS 0 0 0 14996 309470.75 0.0210403631060061 -9 0.4507598876953125 9 Unmodified _EMLLIILVY_ ENST00000454465.1_1_2:87398353-87423749:+|nuORF;ENSG00000153107|ENST00000341068|ANAPC1 36.04419817259434 0.0971720506436186 3 {I|L}KS{I|L}{I|L}YV 7 6 53.748 0.0 0.0 4.8612 0.0 0.0 271.11729628730626 0.0 271.11729628730626 0.0 6.836841817612651 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 {I|L}KS{I|L}{I|L}YV 4.8612 - 856 1 1.133 83467.7 1.0 9423 5580 14996 HBL1_DMSO_200M_050219_1,15005 HBL1_DMSO_200M_050219_1,15005,EMLLIILVY True False ILSKDGVLYV 73.880578 553.826708972454 7833990.0 14996.0 ENST00000454465.1_1_2:87398353-87423749:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 6.39227279027303 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15006 73.89 539.0 486940.0 25 0 73274.0 -1 0 115 970.9493059842932 1939.8840590353864 2 971.451220691204 MULTI CID FTMS 0 0 0 14996 276376.40625 0.3603977900930721 -2 0.1668853759765625 10 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}SC(Carbamidomethyl (C))[DG]E{I|L}PP{I|L} 13 -1 69.947 0.0 0.0 3.6057 0.0 0.0 0.0 508.21052684553337 508.21052684553337 30.10325812371409 0.0 0.0 0.0 0 0.8494850021680094 1.3979400086720375 0.9049471895720984 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}SC(Carbamidomethyl (C))[DG]E{I|L}PP{I|L} 3.6057 - 5068 1 1.133 173950.2 1.0 9424 5580 14996 HBL1_DMSO_200M_050219_1,15006 HBL1_DMSO_200M_050219_1,15006, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15007 73.899 511.0 219080.0 25 0 29980.0 39885 VFLVGFVHIF 10 149 589.342962126194 1176.671371319188 2 589.3434326052666 MULTI CID FTMS 0 0 0 -1 0 11 Unmodified _VFLVGFVHIF_ ENST00000393295.7_1_3:128848618-128848771:-|nuORF 4.3292370932331545 0.7066112369704343 3 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 7 10.802 0.0 0.0 0.91801 0.0 0.0 263.2873513990692 503.1538790338501 766.4412304329193 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 0.91801 - 104 + 1 1.133 87056.4 1.0 9425 5580 14996 HBL1_DMSO_200M_050219_1,15007 HBL1_DMSO_200M_050219_1,15007,VFLVGFVHIF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15008 73.904 256.0 787200.0 25 0 49821.0 + -1 SELGFTMGM 9 189 494.7090491203952 987.4035453075904 2 494.7093383669853 MULTI CID FTMS 0 0 0 14996 254363.625 0.6451841389525625 -2 0.1668853759765625 12 Oxidation (M) _SELGFTM(Oxidation (M))GM_ REV__ENSG00000183434|ENST00000310125|TFDP3 16.942295170755138 0.3780752226737986 3 {[DA]|[EG]}T 3 -1 29.181 0.0 0.0 2.9553 0.0 0.0 0.0 697.2688550238628 697.2688550238628 8.194765492042109 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 {[DA]|[EG]}T 2.9553 - 392 1 1.133 152940.4 1.0 9426 5580 14996 HBL1_DMSO_200M_050219_1,15008 HBL1_DMSO_200M_050219_1,15008,SELGFTMGM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15009 73.909 262.0 674190.0 25 0 82552.0 + 3264 AYGRMGLAL 9 188 476.257485001731 950.500417070262 2 476.2562438845634 MULTI CID FTMS 0 0 0 14996 206150.671875 0.443496082042743 1 -0.0768203735351562 13 Unmodified _AYGRMGLAL_ ENSG00000104969|ENST00000221566|SGTA;ENSG00000197860|ENST00000381007|SGTB 26.88365393820708 0.1891292719743517 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L} 8 5 + 37.245 0.0 0.0 3.9185 3.9185 77.305 0.0 0.0 0.0 15.843152241873554 8.327483047603565 8.327483047603565 5.668315107937247 0 0.7302046884880938 1.6989700043360187 0.4749073637206092 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L};[{I|L}P][HQ]C(Carbamidomethyl (C)){I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}][MN]A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KG][W{I|L}]T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[K{I|L}]D[WR];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}][C(Carbamidomethyl (C))R]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}][RP]G{M(Oxidation (M))|F};[{I|L}P]K[C(Carbamidomethyl (C))S]YA{I|L};[{I|L}P][HQ][Q{I|L}]C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}]S[WR] 3.9185;3.3221;3.0712;2.9081;2.6889;2.6297;2.6279;2.5868;2.5446;2.4203 -;-;-;-;-;-;-;-;-;- 1597 + 1 1.133 137708.4 1.0 9427 5580 14996 HBL1_DMSO_200M_050219_1,15009 HBL1_DMSO_200M_050219_1,15009,AYGRMGLAL False True AYGRMGLAL 73.908697 476.256243884563 6983285.0 14996.0 ENSG00000197860|ENST00000381007|SGTB;;ENSG00000104969|ENST00000221566|SGTA 1.4748095174630482 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15010 73.92 552.0 410010.0 25 0 17888.0 + 24802 MPIYPTYNEV 10 198 613.79159495609 1225.5686369789798 2 613.7932617068291 MULTI CID FTMS 0 0 0 14996 208893.171875 0.1776962987836784 7 -0.6340484619140625 14 Unmodified _MPIYPTYNEV_ ENSG00000124201|ENST00000396105|ZNFX1;nc|ENSG00000124201|Q9P2E3-2|ZNFX1 53.832793166522166 0.0576554960245129 3 [{I|L}P]MY[TP]YNEV 10 2 + 60.04 0.0 0.0 4.899 4.899 74.03 0.0 0.0 0.0 5.249969512695529 9.290842336514018 5.249969512695529 1.249387366082999 0 0.4757724967479859 1.154901959985743 0.7742275032520141 0.3807196863200844 [{I|L}P]MY[TP]YNEV;[{I|L}P]YM[TP]YNEV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}Y[TP]YNEV;[{I|L}P]Y[TP]MYNEV;[{I|L}P]MY[TP]YGGEV;[{I|L}P]YM[TP]YGGEV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}Y[TP]YGGEV;[TP]Y[{I|L}P]MYNEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PY[TP]YNEV;[VP]TA{[QS]|[NT]}C(Carbamidomethyl (C))[HV]EV 4.899;4.797;4.4706;4.1631;3.8405;3.7386;3.7228;3.6363;3.6248;3.5918 -;-;+;-;-;-;-;-;-;- + 4092 1 1.133 167309.9 1.0 9428 5580 14996 HBL1_DMSO_200M_050219_1,15010 HBL1_DMSO_200M_050219_1,15010,MPIYPTYNEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15011 73.921 73.0 506720.0 25 0 71939.0 + 24165 LYSHENEFS 9 77 563.2438512888365 1124.4731496444729 2 563.7466308474541 MULTI CID FTMS 0 0 0 14996 153119.359375 0.3137612626833058 4 -0.3799209594726562 15 Unmodified _LYSHENEFS_ REV__ENSG00000162692|ENST00000294728|VCAM1;REV__nc|ENSG00000162692|P19320-3|VCAM1 8.593279151180031 0.6146971463335029 3 [Y{I|L}]KW{I|L}VA 7 -1 33.153 0.0 0.0 2.9483 0.0 0.0 0.0 247.9532881544916 247.9532881544916 22.18388217506849 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [Y{I|L}]KW{I|L}VA 2.9483 - 239 1 1.133 35338.0 1.0 9429 5580 14996 HBL1_DMSO_200M_050219_1,15011 HBL1_DMSO_200M_050219_1,15011,LYSHENEFS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15012 73.925 217.0 431160.0 25 0 19599.0 20222 LLDAHEAG 8 130 413.2096559801076 824.4047590270152 2 413.2093994021416 MULTI CID FTMS 0 0 0 14996 144995.3125 0.6989707548864569 -2 0.1668853759765625 16 Unmodified _LLDAHEAG_ ENSG00000145214|ENST00000273814|DGKQ 5.760428011301431 0.7893668129297577 3 [EP]W 3 7 24.794 0.0 0.0 3.0075 0.0 0.0 0.0 409.2056372831277 409.2056372831277 11.298793729568857 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2742275032520141 0.0 [EP]W 3.0075 - 43 1 1.133 77569.3 1.0 9430 5580 14996 HBL1_DMSO_200M_050219_1,15012 HBL1_DMSO_200M_050219_1,15012,LLDAHEAG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15014 73.93 5.5 4898900.0 25 0 396780.0 + 1028 AGDRLRCQI 9 55 516.2741984091926 1030.5338438851852 2 516.2744628787041 MULTI CID FTMS 0 0 0 15013 6660044.0 0.7419311069160222 -1 0.0768203735351562 1 Unmodified _AGDRLRCQI_ REV__ENSG00000042062|ENST00000327979|RIPOR3;REV__ENST00000462493.1_1_20:49214115-49253138:-|nuORF;REV__nc|ENSG00000042062|Q96MK2-2|RIPOR3;REV__nc|ENSG00000042062|Q96MK2|RIPOR3 16.942295170755138 0.3780752226737986 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[DP]VQ{I|L} 9 -1 + 24.357 0.0 0.0 2.3636 2.3636 49.234 0.0 0.0 0.0 1.654237220656686 12.35068027639635 1.654237220656686 0.0 0 0.5994850021680094 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[DP]VQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]{I|L}VQ{I|L};[DP]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VQ{I|L};[VP][YT][DP]VQ{I|L} 2.3636;2.3636;1.7793;1.2991 -;-;-;- 62 1 1.133 27403.7 1.0 9431 5581 15013 HBL1_DMSO_200M_050219_1,15014 HBL1_DMSO_200M_050219_1,15014,AGDRLRCQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15015 73.931 12.0 3774600.0 25 0 335130.0 + 41562 VPPEILNNV 9 75 497.7822691072368 993.5499852812736 2 497.7822753787041 MULTI CID FTMS 0 0 0 15013 4242333.5 0.3014199443745584 8 -0.7023544311523438 2 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 32.30548876998284 0.1201446275138228 3 [VP][EP]{I|L}{I|L}NNV 9 0 + 43.847 0.0 0.0 4.4132 4.4132 72.501 0.0 0.0 0.0 1.249387366082999 8.001123851037377 1.249387366082999 1.249387366082999 0 0.5484550065040281 2.0 0.0 0.0 + + [VP][EP]{I|L}{I|L}NNV;[EP]P{I|L}V{I|L}NNV;[EP]{I|L}PV{I|L}NNV;[EP]P{I|L}{I|L}VNNV;[EP]PV{I|L}{I|L}NNV;[EP]{I|L}P{I|L}VNNV;{[HG]|PP}E{I|L}V{I|L}NNV;[VP][EP]{I|L}{I|L}GGNV;[EP]P{I|L}V{I|L}GGNV;{[HG]|PP}E{I|L}{I|L}VNNV 4.4132;4.2874;3.9844;3.9844;3.8072;3.6814;3.6141;3.4864;3.3606;3.3111 +;-;-;-;-;-;-;-;-;- + 284 1 1.133 41324.3 1.0 9432 5581 15013 HBL1_DMSO_200M_050219_1,15015 HBL1_DMSO_200M_050219_1,15015,VPPEILNNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15016 73.932 8.3 3998000.0 25 0 605000.0 + 8671 EVIKELAQI 9 65 521.8121755015023 0 521.8136474490166 PEAK CID FTMS 0 0 0 15013 3474158.75 0.5252403575402035 -1 0.0768203735351562 3 Unmodified _EVIKELAQI_ ENSG00000115241|ENST00000344034|PPM1G;ENST00000472077.1_1_2:27608458-27608728:-|nuORF 21.74664581756881 0.185237546287679 3 DNQ{I|L}A{[VA]|[{I|L}G]}D 8 7 23.409 0.0 0.0 2.2474 0.0 0.0 130.13825373562332 82.06688104801015 212.20513478363347 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 DNQ{I|L}A{[VA]|[{I|L}G]}D 2.2474 - 117 + 1 1.133 32375.6 1.0 9433 5581 15013 HBL1_DMSO_200M_050219_1,15016 HBL1_DMSO_200M_050219_1,15016,EVIKELAQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15017 73.933 44.0 1107300.0 25 0 174090.0 39479 VARLDGRL 8 75 450.2748616592415 898.535170385283 2 450.2749511599541 MULTI CID FTMS 0 0 0 15013 1263681.375 0.0816981634095964 8 -0.7023544311523438 4 Unmodified _VARLDGRL_ ENSG00000101986|ENST00000218104|ABCD1 0.7936320650641473 0.8195151834710337 3 V 1 7 11.109 0.0 0.0 1.2364 0.0 0.0 781.455532789383 0.0 781.455532789383 0.0 4.119543704721593 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2364 + + 9 + 1 1.133 44729.7 1.0 9434 5581 15013 HBL1_DMSO_200M_050219_1,15017 HBL1_DMSO_200M_050219_1,15017,VARLDGRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15018 73.935 100.0 1039500.0 25 0 110920.0 + 42798 VVITEKGISDL 11 129 587.3404189105876 1172.666284887975 2 587.3403808474541 MULTI CID FTMS 0 0 0 15013 648517.875 0.0781407043349906 7 -0.675262451171875 5 Unmodified _VVITEKGISDL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 55.23464941255904 0.0886405999673349 3 VV{I|L}T[MT]G{I|L}TGD 11 5 75.919 0.0 0.0 6.4741 0.0 0.0 0.0 82.06690393619374 82.06690393619374 48.90730411596656 0.0 0.0 0.0 0 0.9698565171985376 2.0 1.9802046884880933 0.0 VV{I|L}T[MT]G{I|L}TGD 6.4741 - 2771 + 1 1.133 82748.0 1.0 9435 5581 15013 HBL1_DMSO_200M_050219_1,15018 HBL1_DMSO_200M_050219_1,15018,VVITEKGISDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15019 73.938 148.0 1379100.0 25 0 95217.0 + 35004 SQPDLLHQL 9 183 525.783120907618 1049.551688882036 2 525.7830078005791 MULTI CID FTMS 0 0 0 15013 656772.0 0.4384270159457256 2 -0.1663818359375 6 Unmodified _SQPDLLHQL_ ENSG00000012817|ENST00000317961|KDM5D;ENSG00000073614|ENST00000399788|KDM5A;ENSG00000117139|ENST00000367265|KDM5B;ENSG00000126012|ENST00000375401|KDM5C;ENST00000465402.1_1_X:53230656-53239709:-|nuORF;ENST00000492117.1_1_Y:21877982-21883284:-|nuORF;ENST00000497100.5_1_X:53227940-53240837:-|nuORF;ENST00000544777.1_1_12:442481-443474:-|nuORF;nc|ENSG00000012817|Q9BY66-2|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D;nc|ENSG00000073614|P29375-2|KDM5A;nc|ENSG00000117139|Q9UGL1-2|KDM5B;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C 56.17704186161178 0.0281986971544335 3 [DP]{I|L}{I|L}HQKAE 9 5 + 60.706 0.0 0.0 5.784 5.784 79.239 0.0 0.0 0.0 2.5838075853591604 2.5838075853591604 2.5838075853591604 2.5838075853591604 0 0.0 0.744727494896694 0.5941876774005248 0.3494850021680094 [DP]{I|L}{I|L}HQKAE;{[QS]|[NT]}PD{I|L}{I|L}HQ{I|L};[DP]{I|L}H{I|L}QKAE;{NN|[MP]|[D{I|L}]|[EV]}P{I|L}HQKAE;[{I|L}P]D{I|L}HQKAE;{[QS]|[NT]}{I|L}E[VP]HQ{I|L};[H{I|L}]EVPQKAE;{NN|[MP]|[D{I|L}]|[EV]}PH{I|L}QKAE;{[QS]|[NT]}{I|L}[DP]{I|L}HQ{I|L};[DP]{I|L}{I|L}H[AG]KAE 5.784;5.5379;5.2657;5.103;4.9772;4.6722;4.6023;4.5846;4.575;4.5737 -;+;-;-;-;-;-;-;-;- + 4373 1 1.133 158793.5 1.0 9436 5581 15013 HBL1_DMSO_200M_050219_1,15019 HBL1_DMSO_200M_050219_1,15019,SQPDLLHQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15020 73.941 122.0 722830.0 25 0 60217.0 + 2274 AQGGVLPNI 9 120 434.7481829402984 867.4818129473967 2 434.7480956912041 MULTI CID FTMS 0 0 0 15013 555947.8125 0.0483045352050607 8 -0.7023544311523438 7 Unmodified _AQGGVLPNI_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000454426.1_1_6:25882256-25882391:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 39.957323273325 0.0756908302845263 3 {[NV]|[RG]}AQ{I|L}PN{I|L} 8 4 {[NV]|[RG]}AQ + + 24.891 -0.79181 -0.19209 2.8694 2.8694 49.952 0.0 0.0 0.0 0.0 10.505784383303707 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.5629529932484498 {[NV]|[RG]}AQ{I|L}PN{I|L} 2.8694 - 182 + 1 1.133 73905.5 1.0 9437 5581 15013 HBL1_DMSO_200M_050219_1,15020 HBL1_DMSO_200M_050219_1,15020,AQGGVLPNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15021 73.943 101.0 1430300.0 25 0 124000.0 + 16948 KILQELPSV 9 171 513.8123127779472 1025.6100726226944 2 513.8137084841728 MULTI CID FTMS 0 0 0 15013 529849.125 0.2697983688590504 2 -0.1663818359375 8 Unmodified _KILQELPSV_ ENSG00000163166|ENST00000295321|IWS1;nc|ENSG00000163166|Q96ST2-2|IWS1;nc|ENSG00000163166|Q96ST2-3|IWS1 65.23502041540118 0.0231836506122253 3 [PS]VS{I|L}K{I|L}PSV 10 6 + 87.628 0.0 0.0 8.544 8.544 89.504 0.0 0.0 0.0 4.812550509366176 23.411742928826257 4.812550509366176 4.812550509366176 0 1.548455006504028 0.958607314841775 1.4932645930102426 0.6989700043360187 [PS]VS{I|L}K{I|L}PSV;{[QN]|[E{I|L}]|[KN]}Q{I|L}K{I|L}PSV;{[VA]|[{I|L}G]}AE{I|L}K{I|L}PSV;[Q{I|L}]E{I|L}K{I|L}PSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}K{I|L}PSV;{[QN]|[E{I|L}]|[KN]}[AG]{I|L}K{I|L}PSV;[VS]PS{I|L}K{I|L}PSV;[VG][DV]{I|L}K{I|L}PSV;[VP]SS{I|L}K{I|L}PSV;[{I|L}A]GE{I|L}K{I|L}PSV 8.544;8.0747;7.7562;7.4308;7.1776;7.1769;6.8932;6.8334;6.7571;6.4777 -;-;-;-;-;-;-;-;-;- 2052 1 1.133 120724.6 1.0 9438 5581 15013 HBL1_DMSO_200M_050219_1,15021 HBL1_DMSO_200M_050219_1,15021,KILQELPSV True True KILQELPSV 73.943055 513.813708484173 43574600.0 15013.0 ENSG00000163166|ENST00000295321|IWS1;;nc|ENSG00000163166|Q96ST2-2|IWS1;;nc|ENSG00000163166|Q96ST2-3|IWS1 2.7714550495147705 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15022 73.946 171.0 780660.0 25 0 100470.0 9581 FLKDKFVEI 9 138 380.2218782634348 1137.6438053905042 3 380.2214843630791 MULTI CID FTMS 0 0 0 15013 506662.53125 0.2793170566421713 -1 0.0768203735351562 9 Unmodified _FLKDKFVEI_ ENSG00000197943|ENST00000564138|PLCG2;ENST00000567980.5_1_16:81819579-81955027:+|nuORF;ENST00000569929.5_1_16:81888133-81917132:+|nuORF 28.49450938151212 0.1686335738423394 3 {M(Oxidation (M))|F}[RD]KD{I|L}{M(Oxidation (M))|F}{I|L} 8 5 21.974 0.0 0.0 1.9315 0.0 0.0 85.08980757881015 0.0 85.08980757881015 0.0 6.489568978889935 0.0 0.0 0 0.2742275032520141 0.0 0.5866968715561641 0.0 {M(Oxidation (M))|F}[RD]KD{I|L}{M(Oxidation (M))|F}{I|L} 1.9315 - 560 1 1.133 108233.2 1.0 9439 5581 15013 HBL1_DMSO_200M_050219_1,15022 HBL1_DMSO_200M_050219_1,15022,FLKDKFVEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15023 73.954 408.0 279390.0 25 0 33948.0 + -1 MLRVKTKKM 9 168 575.8429688153368 1149.6713846974735 2 575.8431884646416 MULTI CID FTMS 0 0 0 15013 410291.8125 0.1142300354285831 13 -1.1215972900390625 10 Oxidation (M) _M(Oxidation (M))LRVKTKKM_ REV__ENSG00000139116|ENST00000361418|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-2|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-3|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-4|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-5|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A 2.302733041254933 0.8342969208511092 3 {I|L} 1 -1 11.259 0.0 0.0 0.97933 0.0 0.0 1018.5767782295032 0.0 1018.5767782295032 0.0 1.3442265614629 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.97933 + + 149 + 1 1.133 89167.9 1.0 9440 5581 15013 HBL1_DMSO_200M_050219_1,15023 HBL1_DMSO_200M_050219_1,15023,MLRVKTKKM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15024 73.955 71.0 865960.0 25 0 55955.0 + 42221 SVLGQAMEKV 10 114 531.288581570691 0 531.2874633669853 PEAK CID FTMS 0 0 0 15013 357645.5625 1.0 0 0.0 11 Unmodified _VSIEDSVISL_ ENSG00000001630|ENST00000003100|CYP51A1 19.256988751693697 0.3042552096208299 3 {I|L} 1 9 11.237 0.0 0.0 1.0595 0.0 0.0 186.1046960613201 758.3513282274687 944.4560242887889 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L} 1.0595 + + 69 + 1 1.133 52792.6 1.0 9441 5581 15013 HBL1_DMSO_200M_050219_1,15024 HBL1_DMSO_200M_050219_1,15024,VSIEDSVISL False False SVLGQAMEKV 73.955353 531.287463366985 3285294.0 15013.0 ENSG00000001630|ENST00000003100|CYP51A1 4.889793872833252 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15025 73.958 147.0 660950.0 25 0 71460.0 + 38847 TVIEWLVV 8 129 479.7821560516389 957.5497591700778 2 479.7821533083916 MULTI CID FTMS 0 0 0 15013 346233.875 0.4503607036945443 -1 0.0768203735351562 12 Unmodified _TVIEWLVV_ REV__ENSG00000027644|ENST00000368195|INSRR 24.67388899826682 0.525179942228231 3 {[TV]|[{I|L}S]}{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}A[KA] 9 -1 + 53.362 0.0 0.0 5.5728 5.5728 86.856 0.0 0.0 0.0 28.15938719897659 9.009461452434238 9.009461452434238 9.244974475172045 0 0.7742275032520141 2.0 0.0 0.4247425010840047 {[TV]|[{I|L}S]}{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}A[KA];{[TV]|[{I|L}S]}{I|L}E[W{I|L}]VV;{[TV]|[{I|L}S]}{I|L}QWRR;{[TV]|[{I|L}S]}{I|L}[AG]WRR;{[TV]|[{I|L}S]}{I|L}NV[KS][TP];{[TV]|[{I|L}S]}{I|L}NV[{I|L}T][QA];{[TV]|[{I|L}S]}{I|L}QA[KT][TP];{[TV]|[{I|L}S]}{I|L}GGV[KS][TP];{[TV]|[{I|L}S]}{I|L}GGV[{I|L}T][QA];{[TV]|[{I|L}S]}{I|L}[AG]A[KT][TP] 5.5728;4.6073;4.0538;3.0794;2.914;2.8128;2.7116;1.9523;1.8511;1.7499 -;+;-;-;-;-;-;-;-;- + 840 + 1 1.133 76367.5 1.0 9442 5581 15013 HBL1_DMSO_200M_050219_1,15025 HBL1_DMSO_200M_050219_1,15025,TVIEWLVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15026 73.968 532.0 451850.0 25 0 41081.0 + + 33313 AVLKDYIAYA 10 212 563.8108936601288 1125.6072343870576 2 563.8102905154228 MULTI CID FTMS 0 0 0 15013 217864.75 1.0 0 0.0 13 Unmodified _SFVGSIIGFSL_ ENSG00000104738|ENST00000649973|MCM4 26.268140514670165 0.4754186812857754 3 [Y{I|L}]DAK{I|L}VAYA 10 -1 + 42.114 0.0 0.0 3.7415 3.7415 69.985 0.0 0.0 0.0 0.8713471749887347 7.512262311882765 0.8713471749887347 0.8713471749887347 0 0.4489700043360188 1.3979400086720375 0.0 0.0 [Y{I|L}]DAK{I|L}VAYA;{[QS]|[NT]}{I|L}YV{I|L}VAYA;[Y{I|L}]KDA{I|L}VAYA;[Y{I|L}]DKA{I|L}VAYA;[Y{I|L}]DAKV{I|L}AYA;[Y{I|L}]ADK{I|L}VAYA;{[TV]|[{I|L}S]}QYV{I|L}VAYA;{[QS]|[NT]}{I|L}YVV{I|L}AYA;[Y{I|L}]KDAV{I|L}AYA;[Y{I|L}]DAK{I|L}G{I|L}YA 3.7415;3.6641;3.6008;3.5147;3.474;3.474;3.4632;3.3966;3.3333;3.3176 -;-;-;-;-;-;-;-;-;- 5788 1 1.133 180171.8 1.0 9443 5581 15013 HBL1_DMSO_200M_050219_1,15026 HBL1_DMSO_200M_050219_1,15026,SFVGSIIGFSL False False AVLKDYIAYA 73.967647 563.810290515423 3437268.0 15013.0 ENSG00000104738|ENST00000649973|MCM4 -0.538953110575676 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15027 73.972 241.0 892700.0 25 0 122100.0 34706 SPVTHSPLL 9 182 475.769208921605 949.5238649100102 2 475.7684509158134 MULTI CID FTMS 0 0 0 15013 173498.359375 0.5137697993410136 -1 0.0768203735351562 14 Unmodified _SPVTHSPLL_ ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN 28.486842064014134 0.1687311288560894 3 [PS]VV[HA]D{I|L}{I|L} 9 3 + 51.76 0.0 0.0 5.4511 5.4511 76.408 0.0 0.0 0.0 1.497830892743579 14.973024840566469 1.497830892743579 1.497830892743579 0 0.7134679910804405 0.5376020021010439 1.2416440611282626 0.0 [PS]VV[HA]D{I|L}{I|L};[VS]PV[HA]D{I|L}{I|L};[PS]VV[WH]{I|L}{I|L};[VS]PV[WH]{I|L}{I|L};[VP]SV[HA]D{I|L}{I|L};[VP]SV[WH]{I|L}{I|L};[PS]VV[HA]{I|L}D{I|L};[VG]{[WT]|[RM]}VY{I|L}{I|L};[Y{I|L}][WK]D{I|L}{I|L};[VS]PV[HA]{I|L}D{I|L} 5.4511;5.2934;5.0859;4.9282;4.2957;3.9304;3.7996;3.7499;3.7178;3.6418 -;-;-;-;-;-;-;-;-;- 1885 1 1.133 165095.4 1.0 9444 5581 15013 HBL1_DMSO_200M_050219_1,15027 HBL1_DMSO_200M_050219_1,15027,SPVTHSPLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15028 73.984 664.0 480970.0 25 0 39765.0 + 45190 YQTALHLAV 9 269 508.28340108345054 1014.5522492337012 2 508.2809326052666 MULTI CID FTMS 0 0 0 15013 145405.890625 0.3057817672258309 -1 0.0768203735351562 15 Unmodified _YQTALHLAV_ ENSG00000146232|ENST00000619360|NFKBIE;nc|ENSG00000146232|O00221|NFKBIE 44.40701690623563 0.0526327925666318 3 [H{I|L}]AT{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]}Y 9 7 + 44.279 0.0 0.0 4.3644 4.3644 73.891 0.0 0.0 0.0 2.1611302949092703 8.696662315049934 2.1611302949092703 2.1611302949092703 0 0.0 0.744727494896694 0.75 0.0 [H{I|L}]AT{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]}Y;[VP]E{I|L}PA{[QV]|[N{I|L}]|[RA]|[KV]}Y;[{I|L}A]HT{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]}Y;[H{I|L}]A{I|L}TA{[QV]|[N{I|L}]|[RA]|[KV]}Y;{NN|[MP]|[D{I|L}]|[EV]}P{I|L}PA{[QV]|[N{I|L}]|[RA]|[KV]}Y;[H{I|L}]{I|L}ATA{[QV]|[N{I|L}]|[RA]|[KV]}Y;[VP]E{I|L}{I|L}ATC(Carbamidomethyl (C)){I|L};[{I|L}A]H{I|L}TA{[QV]|[N{I|L}]|[RA]|[KV]}Y;[H{I|L}]A{I|L}AT{[QV]|[N{I|L}]|[RA]|[KV]}Y;[{I|L}T][HA]{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]}Y 4.3644;4.1514;3.6478;3.4504;3.3777;3.2317;2.8251;2.7338;2.6174;2.534 -;-;-;-;-;-;-;-;-;- 4418 1 1.133 244855.5 1.0 9445 5581 15013 HBL1_DMSO_200M_050219_1,15028 HBL1_DMSO_200M_050219_1,15028,YQTALHLAV True True YQTALHLAV 73.983713 508.280932605267 2944041.25 15013.0 nc|ENSG00000146232|O00221|NFKBIE;;ENSG00000146232|ENST00000619360|NFKBIE 3.140335241953532 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15029 73.993 552.0 245990.0 25 0 99662.0 -1 0 136 654.3155380683681 1959.924784805304 3 654.3052856326103 MULTI CID FTMS 0 0 0 -1 0 16 3 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}{I|L} 5 -1 24.686 0.0 0.0 1.2595 0.0 0.0 0.0 1405.597553232074 1405.597553232074 15.420787969958452 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.6549471895720985 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}{I|L} 1.2595 - 450 1 1.133 110148.2 1.0 9446 5581 15013 HBL1_DMSO_200M_050219_1,15029 HBL1_DMSO_200M_050219_1,15029, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15030 74.008 800.0 458480.0 25 0 49968.0 + + -1 LPYHIPHL 8 293 330.5236246584192 988.5490445754576 3 330.5234252810478 MULTI CID FTMS 0 0 0 15013 134161.46875 0.5107080353030298 -1 0.0768203735351562 17 Oxidation (M) _LHM(Oxidation (M))LPIIH_ nc|ENSG00000198862|O94822-3|LTN1;ENSG00000198862|ENST00000361371|LTN1 32.116972079565 0.368454113111938 3 {I|L}PYH{I|L}PH{I|L} 8 -1 + 47.893 0.0 0.0 4.8448 4.8448 79.796 0.0 0.0 0.0 16.429292751246294 5.247628891548892 5.247628891548892 5.247628891548892 0 0.5371854128202311 0.00436480540245 0.0 0.0 {I|L}PYH{I|L}PH{I|L};{I|L}PYH{I|L}P{I|L}H;{I|L}{I|L}{M(Oxidation (M))|F}H{I|L}PH{I|L};{I|L}{I|L}{M(Oxidation (M))|F}H{I|L}P{I|L}H;{I|L}{I|L}{M(Oxidation (M))|F}H{I|L}YA{I|L};{I|L}PYHKK{[CT]|[{M(Oxidation (M))|F}G]};{I|L}{I|L}{M(Oxidation (M))|F}HKK{[CT]|[{M(Oxidation (M))|F}G]} 4.8448;4.3139;4.1937;3.6629;2.7915;2.1429;1.877 -;-;-;-;-;-;- 277 + 1 1.133 289524.4 0.8299999833106995 9447 5581 15013 HBL1_DMSO_200M_050219_1,15030 HBL1_DMSO_200M_050219_1,15030,LHMLPIIH False False LPYHIPHL 74.008407 330.523425281048 3974130.75 15013.0 nc|ENSG00000198862|O94822-3|LTN1;;ENSG00000198862|ENST00000361371|LTN1 5.747337818145752 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15031 74.021 711.0 149660.0 25 0 8690.6 + -1 CFCVWAQPPC 10 154 662.7685048922949 1323.5224568513895 2 662.7686035037041 MULTI CID FTMS 0 0 0 15013 129271.015625 0.4769257242074243 -1 0.0768203735351562 18 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))FC(Carbamidomethyl (C))VWAQPPC(Carbamidomethyl (C))_ REV__ENST00000222990.7_1_7:2293201-2294050:-|nuORF 21.74664581756881 0.480091245866545 3 [QA]DWA 5 -1 53.632 0.0 0.0 4.0522 0.0 0.0 0.0 749.2611247310649 749.2611247310649 28.22559982972642 0.0 0.0 0.0 0 1.424742501084005 0.744727494896694 0.0 1.5994850021680094 [QA]DWA 4.0522 - 3942 1 1.133 82762.5 1.0 9448 5581 15013 HBL1_DMSO_200M_050219_1,15031 HBL1_DMSO_200M_050219_1,15031,CFCVWAQPPC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15032 74.023 119.0 692160.0 25 0 99384.0 + 39358 MGAVALRI 8 109 415.74929395932594 829.4840349854519 2 415.7494384646416 MULTI CID FTMS 0 0 0 15013 115963.0390625 0.055324650031619 -3 0.2437057495117187 19 Unmodified _VAGMALLR_ ENST00000398696.3_1_16:31765161-31765194:+|nuORF 34.18733598223924 0.3315367612694167 3 MGAVA{I|L}R{I|L} 8 6 + 78.045 0.0 0.0 9.4088 9.4088 87.694 0.0 0.0 0.0 60.87327842948042 12.2944167232194 12.2944167232194 3.0102999566398125 0 1.0 1.3979400086720375 0.0 0.6421590589602533 MGAVA{I|L}R{I|L};MGAV{I|L}AR{I|L};MGA{I|L}G{I|L}R{I|L};MG{I|L}GA{I|L}R{I|L};MGA{I|L}VAR{I|L};MG{I|L}G{I|L}AR{I|L};MG{I|L}AG{I|L}R{I|L};MG{I|L}AVAR{I|L};MG{I|L}Q{I|L}R{I|L};MQVA{I|L}R{I|L} 9.4088;9.0459;8.7308;8.623;8.3678;8.2601;7.9449;7.582;7.5351;7.4162 -;-;-;-;-;-;-;-;-;- 264 + 1 1.133 71444.8 1.0 9449 5581 15013 HBL1_DMSO_200M_050219_1,15032 HBL1_DMSO_200M_050219_1,15032,VAGMALLR False False MGAVALRI 74.023223 415.749438464642 32508294.0 15013.0 ENST00000398696.3_1_16:31765161-31765194:+|nuORF 3.71302874883016 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15033 74.037 723.0 214210.0 25 0 16382.0 -1 MFFFMVFSL 9 195 592.7775549877517 0 592.7776977419853 PEAK CID FTMS 0 0 0 15013 101728.9921875 0.7990514826987793 -1 0.0768203735351562 20 Oxidation (M) _MFFFM(Oxidation (M))VFSL_ ENSG00000165762|ENST00000641885|OR4K2 11.640296217721598 0.2934555500198502 3 KA 2 -1 6.4537 0.0 0.0 0.54528 0.0 0.0 758.2473269171065 223.14553247623283 981.3928593933392 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KA 0.54528 - 154 + 1 1.133 115328.9 1.0 9450 5581 15013 HBL1_DMSO_200M_050219_1,15033 HBL1_DMSO_200M_050219_1,15033,MFFFMVFSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15035 74.041 3.3 6814300.0 25 0 931400.0 + 8220 EPWVQTLLS 9 42 536.787520797261 1071.560488661322 2 536.7880737185478 MULTI CID FTMS 0 0 0 15034 25240792.0 0.08056774602779 9 -0.7729034423828125 1 Unmodified _EPWVQTLLS_ REV__ENSG00000137628|ENST00000393743|DDX60 13.90604991867851 0.4602628045680013 3 [EP]WVK[DV]TV 9 -1 + 23.574 0.0 0.0 2.2 2.2 75.397 0.0 0.0 0.0 0.7381103382509693 7.375977872132328 0.7381103382509693 6.989700043360191 0 0.7429928190999391 0.0 0.0 0.0 [EP]WVK[DV]TV;{[MG]|[TS]}[HS]VK[DV]TV 2.2;1.5477 -;- 57 1 1.126 25681.8 1.0 9451 5582 15034 HBL1_DMSO_200M_050219_1,15035 HBL1_DMSO_200M_050219_1,15035,EPWVQTLLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15036 74.042 3.7 5390500.0 25 0 580310.0 + 22131 LPPQPKVK 8 40 453.7921119878436 905.5696710424872 2 453.7924377322197 MULTI CID FTMS 0 0 0 15034 19779060.0 0.3088158917652843 14 -1.1642532348632812 2 Unmodified _LPPQPKVK_ REV__ENSG00000204463|ENST00000676615|BAG6;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6 13.50788311687929 0.7113601687236069 3 {I|L}PP 3 -1 50.445 0.0 0.0 5.5706 0.0 0.0 0.0 595.3559664361936 595.3559664361936 43.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PP 5.5706 + + 7 + 1 1.126 23745.0 1.0 9452 5582 15034 HBL1_DMSO_200M_050219_1,15036 HBL1_DMSO_200M_050219_1,15036,LPPQPKVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15037 74.044 8.6 9634100.0 25 0 1903600.0 + 4064 DAMKYTIVV 9 104 520.2782689739805 1038.541985014761 2 520.2791015505791 MULTI CID FTMS 0 0 0 15034 6516271.5 0.0945025408464267 -3 0.283599853515625 3 Unmodified _DAMKYTIVV_ ENSG00000152234|ENST00000398752|ATP5F1A;nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A 47.74868867922204 0.0453060283459952 3 {[DA]|[EG]}MKYT{I|L}VV 9 0 + 57.572 0.0 0.0 5.5435 5.5435 89.086 0.0 0.0 0.0 17.70181229336984 29.827928396237127 17.70181229336984 19.50653350000761 0 0.7742275032520141 1.3979400086720375 1.174742501084005 0.0 + + {[DA]|[EG]}MKYT{I|L}VV;{[SA]|[TG]}{[WT]|[RM]}YT{I|L}VV;[AG]P[YG]YT{I|L}VV;[QP][YG]YT{I|L}VV;[{I|L}T]{[QC]|[C(Carbamidomethyl (C))A]}YT{I|L}VV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[DA]|[EG]}YT{I|L}VV;[{I|L}T]Y{[QC]|[C(Carbamidomethyl (C))A]}T{I|L}VV;[TA]{[WS]|[C(Carbamidomethyl (C)){I|L}]}YT{I|L}VV;[{I|L}T]YKM{[DA]|[EG]}VV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WY]T{I|L}VV 5.5435;3.6653;3.4613;3.3316;3.2413;3.2346;2.901;2.7417;2.5454;2.2976 +;-;-;-;-;-;-;-;-;- + 952 1 1.126 66240.3 1.0 9453 5582 15034 HBL1_DMSO_200M_050219_1,15037 HBL1_DMSO_200M_050219_1,15037,DAMKYTIVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15038 74.045 34.0 2990900.0 25 0 240370.0 + 38259 TPVRLPSI 8 115 441.7740672237752 881.5335815143503 2 441.7740661501884 MULTI CID FTMS 0 0 0 15034 2297503.0 1.0 0 0.0 4 Unmodified _TPVRLPSI_ ENSG00000125347|ENST00000245414|IRF1;ENST00000472045.1_1_5:131819645-131819816:-|nuORF 67.83816525789305 0.1151378002238335 3 TPVR{I|L}PS{I|L} 8 0 + 88.644 0.0 0.0 10.056 10.056 97.162 0.0 0.0 0.0 45.58622918369565 14.024174299985006 14.024174299985006 14.599009323677096 0 2.004432191740108 1.6989700043360187 1.174742501084005 0.0 + + TPVR{I|L}PS{I|L};TPVR{I|L}PTV;[TP]VR{I|L}PS{I|L};[TP]VR{I|L}PVT;[TP]VRVPT{I|L};[TP]VR{I|L}VPT;[VP]RT{I|L}PS{I|L};[TP]VRVP{I|L}T;[PS]{I|L}R{I|L}PS{I|L};[TP]VR{I|L}TPV 10.056;8.3995;6.5575;5.9789;5.9607;5.5224;5.3978;5.3821;4.9538;4.9022 +;-;+;-;-;-;-;-;-;- + 894 + 1 1.126 82988.6 1.0 9454 5582 15034 HBL1_DMSO_200M_050219_1,15038 HBL1_DMSO_200M_050219_1,15038,TPVRLPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15039 74.047 94.0 1006000.0 25 0 74495.0 + 27931 PLTQDLPVPL 10 113 546.8195977130372 1091.6246424928745 2 546.8220092654228 MULTI CID FTMS 0 0 0 15034 2042969.25 1.0 0 0.0 5 Unmodified _PLTQDLPVPL_ REV__ENSG00000198183|ENST00000354297|BPIFA1 13.90604991867851 0.6142120002215601 3 [VG]AV{M(Oxidation (M))|F}HGPP[{I|L}V] 11 -1 + 37.269 0.0 0.0 3.4141 3.4141 73.341 0.0 0.0 0.0 3.3016597579051634 7.367585652254185 3.3016597579051634 3.3016597579051634 0 0.5 1.3010299956639813 0.0 0.0 [VG]AV{M(Oxidation (M))|F}HGPP[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}V{M(Oxidation (M))|F}HGPP[{I|L}V];[{I|L}P]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TPP[{I|L}V];[{I|L}P]P[QT]MPP[{I|L}V];[{I|L}P][{I|L}T]{[DA]|[EG]}GPP[{I|L}V];{[MS]|[{M(Oxidation (M))|F}A]}[RV]HGPP[{I|L}V];{[HG]|PP}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TPP[{I|L}V];{[HG]|PP}{I|L}[QT]MPP[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}V{M(Oxidation (M))|F}[YQ]P[{I|L}V];[{I|L}P][{I|L}T]HHY[{I|L}V] 3.4141;3.1116;2.6138;2.338;1.9291;1.6918;1.6773;1.4016;1.0504;0.92187 -;-;-;-;-;-;-;-;-;- 234 1 1.126 78524.4 1.0 9455 5582 15034 HBL1_DMSO_200M_050219_1,15039 HBL1_DMSO_200M_050219_1,15039,PLTQDLPVPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15040 74.048 42.0 1517900.0 25 0 126840.0 + 32581 SAVELPKI 8 72 428.7607059775943 855.5068590219886 2 428.7607910037041 MULTI CID FTMS 0 0 0 15034 1988728.25 0.8815930555196918 3 -0.262451171875 6 Unmodified _SAVELPKI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-4|BRCC3;nc|ENSG00000185515|P46736|BRCC3 30.63653989081413 0.3996269429323407 3 {[SA]|[TG]}VE{I|L}{I|L}TA 8 3 62.828 0.0 0.0 7.3439 0.0 0.0 0.0 68.05134760074452 68.05134760074452 52.6468425243185 0.0 0.0 0.0 0 0.7134679910804405 2.0 1.274227503252014 0.0 {[SA]|[TG]}VE{I|L}{I|L}TA 7.3439 - 88 + 1 1.126 53123.2 1.0 9456 5582 15034 HBL1_DMSO_200M_050219_1,15040 HBL1_DMSO_200M_050219_1,15040,SAVELPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15041 74.049 38.0 865270.0 25 0 96268.0 + 2841 AVANEEGFVRL 11 58 602.8209200167587 1203.6272871003173 2 602.8204223513603 MULTI CID FTMS 0 0 0 15034 1827928.0 1.0 0 0.0 7 Unmodified _AVANEEGFVRL_ ENSG00000143476|ENST00000366991|DTL;nc|ENSG00000143476|Q9NZJ0-2|DTL 37.07464296494664 0.257459615863268 3 {[VA]|[{I|L}G]}ANEEG{M(Oxidation (M))|F}V[R{I|L}] 11 0 + 84.284 0.0 0.0 7.0025 7.0025 88.053 0.0 0.0 0.0 72.29419515570638 7.367585652254192 7.367585652254192 6.575773191777941 0 0.4247425010840047 2.0 0.4247425010840047 0.3807196863200844 + + {[VA]|[{I|L}G]}ANEEG{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}ANEW{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}AGGEEG{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}AGGEW{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}ANEE[R{M(Oxidation (M))|F}][R{I|L}];{[VA]|[{I|L}G]}[WQ]EG{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}AGGEE[R{M(Oxidation (M))|F}][R{I|L}];{[VA]|[{I|L}G]}[WQ]W{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}[WQ]E[R{M(Oxidation (M))|F}][R{I|L}] 7.0025;6.4562;6.2441;5.6948;5.3985;4.7955;4.6371;4.2528;3.1952 +;-;-;-;-;-;-;-;- + 139 + 1 1.126 30621.8 1.0 9457 5582 15034 HBL1_DMSO_200M_050219_1,15041 HBL1_DMSO_200M_050219_1,15041,AVANEEGFVRL False True AVANEEGFVRL 74.049281 602.82042235136 14670243.0 15034.0 nc|ENSG00000143476|Q9NZJ0-2|DTL;;ENSG00000143476|ENST00000366991|DTL 6.734941959381104 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15042 74.05 43.0 1503700.0 25 0 213090.0 28084 PPILELGLTF 10 84 550.3217983615174 1098.629043789835 2 550.3235961794853 MULTI CID FTMS 0 0 0 15034 1800468.75 0.4331548698681429 5 -0.4455642700195312 8 Unmodified _PPILELGLTF_ ENST00000481948.1_1_16:88104968-88110264:+|nuORF 19.256988751693697 0.5244284437930726 3 {[VA]|[{I|L}G]}{I|L}T{M(Oxidation (M))|F} 5 5 38.684 0.0 0.0 3.5212 0.0 0.0 0.0 564.3018088229219 564.3018088229219 6.25442771474777 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 + {[VA]|[{I|L}G]}{I|L}T{M(Oxidation (M))|F} 3.5212 + + 342 1 1.126 53497.6 1.0 9458 5582 15034 HBL1_DMSO_200M_050219_1,15042 HBL1_DMSO_200M_050219_1,15042,PPILELGLTF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15043 74.052 52.0 1020500.0 25 0 187700.0 -1 KMVLQMVLR 9 80 567.3295813073205 1132.644609681441 2 567.3300048708916 MULTI CID FTMS 0 0 0 15034 1699240.5 0.3617227401249459 13 -1.1355438232421875 9 Oxidation (M) _KM(Oxidation (M))VLQMVLR_ ENST00000420851.6_1_3:195435625-195438442:+|nuORF 0.5247636613948944 0.8963649302248013 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.126 46516.0 1.0 9459 5582 15034 HBL1_DMSO_200M_050219_1,15043 HBL1_DMSO_200M_050219_1,15043,KMVLQMVLR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15044 74.053 33.0 1490300.0 25 0 127330.0 22316 LPSGYAPVSL 10 74 502.27585584449577 1002.5371587557916 2 502.2771484255791 MULTI CID FTMS 0 0 0 15034 1571093.75 0.5233232608221897 -3 0.283599853515625 10 Unmodified _LPSGYAPVSL_ ENST00000603363.5_1_11:75507249-75511550:+|nuORF;ENST00000603865.1_1_11:75507249-75507624:+|nuORF 25.399314129420983 0.3980215340001851 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVTP[W{I|L}] 8 7 + 36.661 0.0 0.0 3.6568 3.6568 80.887 0.0 0.0 0.0 13.521825181113629 6.989700043360188 6.989700043360188 9.262137858390812 0 0.0 1.3010299956639813 0.3807196863200844 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVTP[W{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]VTP[W{I|L}];{[TV]|[{I|L}S]}{[WT]|[RM]}TP[W{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KA]EP[W{I|L}];[VG][MT]VTP[W{I|L}];[PS][R{M(Oxidation (M))|F}]TP[W{I|L}];{[SA]|[TG]}{[ET]|[MV]}VTP[W{I|L}];[VG][R{M(Oxidation (M))|F}]EP[W{I|L}] 3.6568;2.7329;2.308;2.0867;1.7354;1.7075;1.3105;1.0893 -;-;-;-;-;-;-;- 221 1 1.126 43698.2 1.0 9460 5582 15034 HBL1_DMSO_200M_050219_1,15044 HBL1_DMSO_200M_050219_1,15044,LPSGYAPVSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15045 74.055 65.0 1167600.0 25 0 216980.0 + 19268 LEKKTRRQY 9 84 611.3558712348582 1220.6971895365164 2 611.3563110232353 MULTI CID FTMS 0 0 0 15034 1542421.625 0.7497966210041223 -3 0.283599853515625 11 Unmodified _LEKKTRRQY_ REV__ENSG00000182718|ENST00000451270|ANXA2;REV__nc|ENSG00000182718|P07355-2|ANXA2;REV__nc|ENSG00000231991|A6NMY6|ANXA2P2 1.6526216038709556 0.8569919814334629 3 H 1 -1 3.4949 0.0 0.0 0.2863 0.0 0.0 698.3959332882727 382.2254122369751 1080.6213455252478 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.2863 - 6 + 1 1.126 60367.4 1.0 9461 5582 15034 HBL1_DMSO_200M_050219_1,15045 HBL1_DMSO_200M_050219_1,15045,LEKKTRRQY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15046 74.057 102.0 391070.0 25 0 54552.0 36135 SVTPEKASL 9 67 466.2587764428943 930.5029999525888 2 466.2588073611259 MULTI CID FTMS 0 0 0 15034 1315741.75 1.0 0 0.0 12 Unmodified _SVTPEKASL_ ENSG00000149633|ENST00000279024|KIAA1755 11.640296217721598 0.521594087909532 3 Y{I|L} 2 8 15.573 0.0 0.0 1.6736 0.0 0.0 636.3517070832512 0.0 636.3517070832512 0.0 -1.082268588648251 -1.082268588648251 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 1.6736 - 47 + 1 1.126 36608.5 1.0 9462 5582 15034 HBL1_DMSO_200M_050219_1,15046 HBL1_DMSO_200M_050219_1,15046,SVTPEKASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15047 74.061 233.0 185730.0 25 0 29509.0 30233 QWRRRPALR 9 75 619.869359399643 1237.724165866086 2 619.8694335818291 MULTI CID FTMS 0 0 0 15034 1159481.375 1.0 0 0.0 13 Unmodified _QWRRRPALR_ ENST00000240139.9_1_8:22298692-22298875:+|nuORF 0.6014990680409731 0.8936861360942873 3 {I|L} 1 8 9.8329 0.0 0.0 0.79443 0.0 0.0 1106.6292237047562 0.0 1106.6292237047562 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.79443 + + 8 + 1 1.126 38569.0 1.0 9463 5582 15034 HBL1_DMSO_200M_050219_1,15047 HBL1_DMSO_200M_050219_1,15047,QWRRRPALR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15048 74.062 47.0 1470900.0 25 0 96068.0 + 19606 LGAQLVAQPL 10 107 505.3052065725149 1008.59586021183 2 505.3057433962822 MULTI CID FTMS 0 0 0 15034 1003727.75 0.6763155935386256 -3 0.283599853515625 14 Unmodified _LGAQLVAQPL_ REV__ENST00000491277.1_1_1:214706191-214706551:-|nuORF 28.486842064014134 0.328649637529545 3 [QP][VS]K{I|L}D 7 -1 38.974 0.0 0.0 3.8642 0.0 0.0 0.0 238.1588844640361 238.1588844640361 19.792943258743616 0.0 0.0 0.0 0 0.7742275032520141 0.8239087409443188 0.0 0.6382104921644451 [QP][VS]K{I|L}D 3.8642 - 657 1 1.126 58391.1 1.0 9464 5582 15034 HBL1_DMSO_200M_050219_1,15048 HBL1_DMSO_200M_050219_1,15048,LGAQLVAQPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15049 74.064 67.0 705990.0 25 0 105180.0 + 23237 LSTLEHLKF 9 75 544.3086855628304 1086.6028181924607 2 544.3112060427666 MULTI CID FTMS 0 0 0 15034 992761.25 0.1962637557290723 14 -1.1642532348632812 15 Unmodified _LSTLEHLKF_ REV__ENSG00000124429|ENST00000262753|POF1B;REV__nc|ENSG00000124429|Q8WVV4-1|POF1B 4.3292370932331545 0.7635526921153418 3 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 1.2419 0.0 0.0 921.5235925838656 0.0 921.5235925838656 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2419 + + 15 + 1 1.126 41467.7 1.0 9465 5582 15034 HBL1_DMSO_200M_050219_1,15049 HBL1_DMSO_200M_050219_1,15049,LSTLEHLKF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15050 74.068 203.0 542890.0 25 0 102430.0 + 39811 VETKLTLL 8 116 458.7878679525143 915.5611829718288 2 458.7879821658134 MULTI CID FTMS 0 0 0 15034 945158.8125 0.1349990723051374 9 -0.7729034423828125 16 Unmodified _VETKLTLL_ REV__ENSG00000114656|ENST00000645291|CFAP92 4.75600775471527 0.7954636275367004 3 {I|L} 1 -1 13.495 0.0 0.0 1.4739 0.0 0.0 784.4662560692881 0.0 784.4662560692881 0.0 -2.95880017344075 -2.95880017344075 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4739 + + 50 + 1 1.126 86384.9 1.0 9466 5582 15034 HBL1_DMSO_200M_050219_1,15050 HBL1_DMSO_200M_050219_1,15050,VETKLTLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15051 74.073 285.0 572320.0 25 0 51688.0 9328 FIITIGHSRLV 11 145 628.3823901167044 1254.7502273002087 2 628.3829833865166 MULTI CID FTMS 0 0 0 15034 899628.375 1.0 0 0.0 17 Unmodified _FIITIGHSRLV_ ENST00000469471.1_1_3:39144861-39149032:-|nuORF 5.731851221503515 0.8481046878870278 3 Y 1 11 10.278 0.0 0.0 0.81909 0.0 0.0 1073.6760828683712 0.0 1073.6760828683712 0.0 0.1889428044469987 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.81909 - 177 + 1 1.126 124632.2 1.0 9467 5582 15034 HBL1_DMSO_200M_050219_1,15051 HBL1_DMSO_200M_050219_1,15051,FIITIGHSRLV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15052 74.079 334.0 172770.0 25 0 19025.0 + 44848 YPPGAFVSV 9 114 468.7457462119005 935.476939490601 2 468.7451049685478 MULTI CID FTMS 0 0 0 15034 790426.1875 1.0 0 0.0 18 Unmodified _YPPGAFVSV_ ENSG00000137055|ENST00000397292|PLAA 26.34127834903884 0.1960301806784604 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{M(Oxidation (M))|F}VSV 8 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{M(Oxidation (M))|F}V + + 19.693 21.929 2.9983 2.1051 2.1051 48.919 0.0 0.0 0.0 0.0 -6.215234340851481 -6.215234340851481 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{M(Oxidation (M))|F}VSV 2.1051 - 178 + 1 1.126 51494.1 1.0 9468 5582 15034 HBL1_DMSO_200M_050219_1,15052 HBL1_DMSO_200M_050219_1,15052,YPPGAFVSV False True YPPGAFVSV 74.079246 468.745104968548 14680777.0 15034.0 ENSG00000137055|ENST00000397292|PLAA 4.650040705998738 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15053 74.086 359.0 322640.0 25 0 83354.0 -1 0 46 1162.797886063532 3485.371828790796 3 1163.463793933392 MULTI CID FTMS 0 0 0 15034 755581.75 0.0064911258942523 23 -1.808013916015625 19 3 {M(Oxidation (M))|F}C(Carbamidomethyl (C)) 2 -1 7.9588 0.0 0.0 0.22835 0.0 0.0 1472.5286413902083 1702.7046602838502 3175.2333016740586 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C)) 0.22835 - 5 + 1 1.126 101326.4 1.0 9469 5582 15034 HBL1_DMSO_200M_050219_1,15053 HBL1_DMSO_200M_050219_1,15053, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15054 74.092 317.0 145080.0 25 0 10541.0 + 10473 FTKLSKRRR 9 98 596.3747270097294 1190.7349010862588 2 596.3752319216728 MULTI CID FTMS 0 0 0 15034 738844.9375 1.0 0 0.0 20 Unmodified _FTKLSKRRR_ REV__ENST00000522332.1_1_8:22056536-22056896:+|nuORF;REV__nc|ENSG00000168487|P13497-6|BMP1 2.059750862983233 0.8427793054688888 3 {I|L} 1 -1 10.181 0.0 0.0 0.85502 0.0 0.0 1059.639974183718 0.0 1059.639974183718 0.0 0.5769670935103477 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.85502 + + 33 + 1 1.126 40656.6 1.0 9470 5582 15034 HBL1_DMSO_200M_050219_1,15054 HBL1_DMSO_200M_050219_1,15054,FTKLSKRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15056 74.096 30.0 1817100.0 25 0 267950.0 + 45910 YYTPDRMVL 9 62 579.2864421085376 1156.558331283875 2 579.2869140505791 MULTI CID FTMS 0 0 0 15055 1767228.0 0.6707238261925991 1 -0.13671875 1 Unmodified _YYTPDRMVL_ ENSG00000165688|ENST00000371717|PMPCA;ENST00000462616.1_1_9:139311477-139313651:+|nuORF;nc|ENSG00000165688|Q10713-2|PMPCA 32.78568957990786 0.1150597335874693 3 YYTPD{[WT]|[RM]}V{I|L} 9 0 + 73.07 0.0 0.0 6.3179 6.3179 93.246 0.0 0.0 0.0 59.97093142085326 5.863650028014433 5.863650028014433 66.74865027867405 0 0.9247425010840048 2.0 0.0 0.0 + + YYTPD{[WT]|[RM]}V{I|L};[C(Carbamidomethyl (C))R][HA]D{[WT]|[RM]}V{I|L} 6.3179;0.54655 +;- + 69 + 1 1.126 46290.5 1.0 9471 5583 15055 HBL1_DMSO_200M_050219_1,15056 HBL1_DMSO_200M_050219_1,15056,YYTPDRMVL True True YYTPDRMVL 74.096037 579.286914050579 47210120.0 15055.0 ENSG00000165688|ENST00000371717|PMPCA;;ENST00000462616.1_1_9:139311477-139313651:+|nuORF;;nc|ENSG00000165688|Q10713-2|PMPCA 7.312563737233479 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15057 74.1 181.0 232520.0 25 0 21290.0 27651 PLGTQLSV 8 95 407.7371639075248 813.4597748818496 2 407.7371093630791 MULTI CID FTMS 0 0 0 15055 412961.59375 0.2377313391786812 1 -0.13671875 2 Unmodified _PLGTQLSV_ ENSG00000111665|ENST00000538862|CDCA3;ENST00000535871.1_1_12:6958551-6959649:-|nuORF;ENST00000536241.1_1_12:6958687-6959760:-|nuORF;ENST00000544610.1_1_12:6958209-6958939:-|nuORF;ENST00000545368.5_1_12:6958360-6960430:-|nuORF 22.4526382665184 0.5719518724627818 3 MTGV 4 6 30.578 0.0 0.0 3.759 0.0 0.0 407.264832768799 0.0 407.264832768799 0.0 15.132717555561452 0.0 0.0 0 0.2887254899964357 0.0 0.2742275032520141 0.0 MTGV 3.759 - 68 + 1 1.126 38000.1 1.0 9472 5583 15055 HBL1_DMSO_200M_050219_1,15057 HBL1_DMSO_200M_050219_1,15057,PLGTQLSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15058 74.101 34.0 2780800.0 25 0 255680.0 + + 45482 YTIQSIERI 9 93 561.8116495838369 1121.6087462344738 2 561.8106567263603 MULTI CID FTMS 0 0 0 15055 1700221.125 0.9294318172422577 -2 0.1663818359375 3 Unmodified _YTLLRQIDT_ nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2 41.8396318013385 0.0653578398400075 3 YT{I|L}{I|L}QSER{I|L} 9 -1 + 91.323 0.0 0.0 8.1421 8.1421 88.175 0.0 0.0 0.0 63.92310206566346 7.090119426301584 7.090119426301584 4.291746928241111 0 0.4247425010840047 2.0 1.048455006504028 0.805462187404089 YT{I|L}{I|L}QSER{I|L};YT{I|L}Q{I|L}SER{I|L};YT{I|L}QS{I|L}ER{I|L};YT{I|L}{I|L}QSWV{I|L};YT{I|L}{I|L}[AG]SER{I|L};YT{I|L}Q{I|L}SWV{I|L};YT{I|L}QS{I|L}WV{I|L};YT{I|L}[AG]{I|L}SER{I|L};YT{I|L}[AG]S{I|L}ER{I|L};YT{I|L}{I|L}Q{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8.1421;7.7595;7.7163;7.5388;7.3211;7.1562;7.113;6.9385;6.8953;6.1615 -;-;-;-;-;-;-;-;-;- 882 + 1 1.126 75479.6 1.0 9473 5583 15055 HBL1_DMSO_200M_050219_1,15058 HBL1_DMSO_200M_050219_1,15058,YTLLRQIDT False False YTIQSIERI 74.10071 561.81065672636 16983412.0 15055.0 nc|ENSG00000024048|Q8IWV8|UBR2;;ENSG00000024048|ENST00000372901|UBR2 4.916371822357178 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15059 74.102 56.0 3364300.0 25 0 592810.0 20882 LMPIKICIL 9 98 348.5503130886796 1042.6291098662389 3 348.5498840212822 MULTI CID FTMS 0 0 0 15055 1300012.625 0.1685518631315115 -2 0.1663818359375 4 Unmodified _LMPIKICIL_ ENSG00000140057|ENST00000267584|AK7 24.020572477871973 0.2255576514309169 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[K{I|L}]{I|L}A{M(Oxidation (M))|F}{I|L} 8 3 40.455 0.0 0.0 3.8801 0.0 0.0 0.0 110.06172352010358 110.06172352010358 28.46578144253336 0.0 0.0 0.0 0 0.0 2.0 0.0 1.1861818737241734 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[K{I|L}]{I|L}A{M(Oxidation (M))|F}{I|L} 3.8801 - 200 1 1.126 163075.9 1.0 9474 5583 15055 HBL1_DMSO_200M_050219_1,15059 HBL1_DMSO_200M_050219_1,15059,LMPIKICIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15060 74.105 122.0 989620.0 25 0 169790.0 + 32497 SALGYLHSL 9 132 480.761269020872 959.507985108544 2 480.7610961794853 MULTI CID FTMS 0 0 0 15055 548437.6875 0.7734736615340353 -2 0.1663818359375 5 Unmodified _SALGYLHSL_ ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1 61.357469665136826 0.0253304979873734 3 {[SA]|[TG]}{I|L}GY{I|L}HTV 9 2 + 61.089 0.0 0.0 6.3667 6.3667 78.398 0.0 0.0 0.0 22.632192780232785 0.8715017571890016 0.8715017571890016 0.8715017571890016 0 0.75 1.6989700043360187 1.1861818737241734 0.0 {[SA]|[TG]}{I|L}GY{I|L}HTV;{[SA]|[TG]}{I|L}GY{I|L}HS{I|L};{[SA]|[TG]}[{M(Oxidation (M))|F}V]S{I|L}HTV;{[SA]|[TG]}[{M(Oxidation (M))|F}V]S{I|L}HS{I|L};[{I|L}A]NG{I|L}YG[RP];{[VA]|[{I|L}G]}QG{I|L}YG[RP];{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}HTV;{M(Oxidation (M))|F}AA{I|L}{[DS]|[MA]|[CV]|TT}HTV;{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}HS{I|L};{M(Oxidation (M))|F}AA{I|L}{[DS]|[MA]|[CV]|TT}HS{I|L} 6.3667;6.2759;3.6768;3.5859;2.8474;2.7565;2.7425;2.723;2.6516;2.6321 -;+;-;-;-;-;-;-;-;- + 1167 + 1 1.126 98588.3 1.0 9475 5583 15055 HBL1_DMSO_200M_050219_1,15060 HBL1_DMSO_200M_050219_1,15060,SALGYLHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15061 74.107 101.0 851960.0 25 0 98463.0 + 15472 IPRVPSLSV 9 107 484.3004739097296 966.5863948862592 2 484.3007690310478 MULTI CID FTMS 0 0 0 15055 487158.90625 0.3395044077184182 -2 0.1663818359375 6 Unmodified _IPRVPSLSV_ ENSG00000152464|ENST00000378197|RPP38 51.629811660486645 0.0367964933207742 3 [{I|L}P]RV[PS]{I|L}SV 9 0 + 34.021 0.0 0.0 3.5197 3.5197 73.83 0.0 0.0 0.0 2.5499186211077287 13.971961506573813 2.5499186211077287 3.5083376013968497 0 1.1421590589602533 0.9208187539523752 0.8494850021680094 0.0 + + [{I|L}P]RV[PS]{I|L}SV;[{I|L}P]RV[PS]S{I|L}V;{[VA]|[{I|L}G]}PVV[R{I|L}]DV;{[VA]|[{I|L}G]}PVV[RD]{I|L}V;[{I|L}P]GVV[R{I|L}]DV;[{I|L}P]GVV[RD]{I|L}V 3.5197;3.1567;2.1116;1.9545;1.186;1.0289 +;-;-;-;-;- + 227 1 1.126 73034.9 1.0 9476 5583 15055 HBL1_DMSO_200M_050219_1,15061 HBL1_DMSO_200M_050219_1,15061,IPRVPSLSV True True IPRVPSLSV 74.1068 484.300769031048 30775926.0 15055.0 ENSG00000152464|ENST00000378197|RPP38 4.815606753031413 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15062 74.115 451.0 318480.0 25 0 17471.0 + 40810 VLLSLFYLTV 10 207 584.3569103075322 1166.6992676818645 2 584.3571044802666 MULTI CID FTMS 0 0 0 15055 470311.59375 0.4314940641211163 1 -0.13671875 7 Unmodified _VLLSLFYLTV_ REV__ENSG00000163482|ENST00000295709|STK36;REV__ENST00000486644.1_1_2:219558031-219561354:+|nuORF;REV__nc|ENSG00000163482|Q9NRP7-2|STK36 11.640296217721598 0.652229146672156 3 [{M(Oxidation (M))|F}V]KDDT{I|L}MT 9 -1 46.186 0.0 0.0 3.9587 0.0 0.0 0.0 113.20034125047678 113.20034125047678 23.667053245199625 0.0 0.0 0.0 0 0.0 2.0 1.7302046884880935 0.0 [{M(Oxidation (M))|F}V]KDDT{I|L}MT 3.9587 - 1624 1 1.126 107382.7 1.0 9477 5583 15055 HBL1_DMSO_200M_050219_1,15062 HBL1_DMSO_200M_050219_1,15062,VLLSLFYLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15063 74.118 131.0 1144600.0 25 0 74906.0 36189 SVVSLTRWL 9 175 530.8100332975487 1059.6055136618972 2 530.8104125857353 MULTI CID FTMS 0 0 0 15055 399448.3125 0.3746710358931116 5 -0.508880615234375 8 Unmodified _SVVSLTRWL_ ENSG00000179431|ENST00000317811|FJX1 14.838274106304384 0.4350285940865338 3 [K{I|L}]M{I|L}V{[ET]|[MV]}N{I|L} 9 7 + 13.302 0.0 0.0 1.2554 1.2554 71.424 0.0 0.0 0.0 0.8278194390853741 1.822156159445344 0.8278194390853741 3.8274720247716414 0 0.1237125054200235 0.0 0.3494850021680094 0.3252574989159953 [K{I|L}]M{I|L}V{[ET]|[MV]}N{I|L};[K{I|L}]M{I|L}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};[VS][{I|L}A]W{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KP];[K{I|L}]M{I|L}V{[ET]|[MV]}QV;[K{I|L}]TE{I|L}{[ET]|[MV]}N{I|L};[K{I|L}]MV{I|L}{[ET]|[MV]}N{I|L};[K{I|L}]M{I|L}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;[K{I|L}]{[QN]|[E{I|L}]|[KN]}AA{[ES]|[DT]|[{I|L}C]}S{I|L};[VS]W[{I|L}A]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KP];{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{I|L}E[KP] 1.2554;0.89416;0.88568;0.84076;0.60114;0.57828;0.47954;0.32972;0.26922;0.2556 -;-;-;-;-;-;-;-;-;- 2217 + 1 1.126 119642.6 1.0 9478 5583 15055 HBL1_DMSO_200M_050219_1,15063 HBL1_DMSO_200M_050219_1,15063,SVVSLTRWL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15064 74.13 695.0 423920.0 25 0 32558.0 + 5471 DLRQSKLRW 9 290 401.2329120657676 1200.6769067975029 3 401.2310668826103 MULTI CID FTMS 0 0 0 15055 329333.90625 0.3196950602224117 1 -0.13671875 9 Unmodified _DLRQSKLRW_ REV__ENST00000240055.7_1_12:104529243-104532019:-|nuORF 14.40537977576856 0.4467465336100671 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVTAA 11 -1 + 63.79 0.0 0.0 5.3128 5.3128 84.656 0.0 0.0 0.0 14.517887936251093 3.5074155413785 3.5074155413785 9.128498242810998 0 -0.0052973247674845 1.6989700043360187 1.0279832216481406 0.8807196863200843 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVTAA;{NN|[MP]|[D{I|L}]|[EV]}K[AG]D{I|L}KVTAA;[KQ]{I|L}DD{I|L}KVTAA;{NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVTAA;{[TV]|[{I|L}S]}[VG]QD{I|L}KVTAA;[Q{I|L}]KDD{I|L}KVTAA;[K{I|L}]QDD{I|L}KVTAA;{[TV]|[{I|L}S]}{[CP]|[EA]}A{I|L}QKVTAA;[K{I|L}]DQD{I|L}KVTAA;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}QD{I|L}KVTAA 5.3128;4.5525;4.1037;4.0788;3.9929;3.6355;3.6054;3.4434;3.3861;3.0052 -;-;-;-;-;-;-;-;-;- 3498 1 1.126 220151.5 1.0 9479 5583 15055 HBL1_DMSO_200M_050219_1,15064 HBL1_DMSO_200M_050219_1,15064,DLRQSKLRW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15065 74.139 560.0 247890.0 25 0 7132.2 + 15723 IRDIIMDEKIL 11 180 679.8873050309804 1357.7600571287608 2 679.8873779177666 MULTI CID FTMS 0 0 0 15055 274697.8125 0.0276860061897412 10 -0.8392410278320312 10 Unmodified _IRDIIMDEKIL_ REV__ENSG00000144285|ENST00000674923|SCN1A;REV__nc|ENSG00000144285|P35498-2|SCN1A;REV__nc|ENSG00000144285|P35498-3|SCN1A 21.59015148037692 0.5852593066373742 3 VPYE{I|L}Q 6 -1 84.29 0.0 0.0 6.208 0.0 0.0 0.0 625.3683625443907 625.3683625443907 11.468005926716812 0.0 0.0 0.0 0 2.190614065464281 1.6989700043360187 0.0 0.4247425010840047 VPYE{I|L}Q 6.208 - 32432 + 1 1.126 102948.9 1.0 9480 5583 15055 HBL1_DMSO_200M_050219_1,15065 HBL1_DMSO_200M_050219_1,15065,IRDIIMDEKIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15066 74.15 591.0 466200.0 25 0 34426.0 + 9121 FFPEYTHQL 9 194 591.285389870177 1180.556226807154 2 591.2864868044853 MULTI CID FTMS 0 0 0 15055 277411.53125 0.3733141990844998 -6 0.4911422729492187 11 Unmodified _FFPEYTHQL_ ENSG00000128708|ENST00000264108|HAT1 58.6788170122104 0.0268135626297836 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYT[HQ]{I|L} 9 0 + 48.866 0.0 0.0 4.1392 4.1392 77.293 0.0 0.0 0.0 3.379931519949736 1.1000676424793454 1.1000676424793454 4.93626797400411 0 0.2742275032520141 0.0 0.6747425010840047 1.0044321917401078 + + {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYT[HQ]{I|L};[EP]YTHQ{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}E{M(Oxidation (M))|F}T[HQ]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQ{[VA]|[{I|L}G]}EP[{M(Oxidation (M))|F}E];[EP]YTH[AG]{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PE{[VA]|[{I|L}G]}QQC{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}T[W{I|L}]P[Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQ[W{I|L}]P[{M(Oxidation (M))|F}E];[EP]YT[PG]QP[RH];[{I|L}P]WT[C(Carbamidomethyl (C))K]T[{M(Oxidation (M))|F}E] 4.1392;3.7211;3.2537;2.914;2.6965;2.2959;2.2746;2.1284;2.1274;2.0977 +;-;-;-;-;-;-;-;-;- + 3123 + 1 1.126 207410.5 1.0 9481 5583 15055 HBL1_DMSO_200M_050219_1,15066 HBL1_DMSO_200M_050219_1,15066,FFPEYTHQL True True FFPEYTHQL 74.149785 591.286486804485 14057422.0 15055.0 ENSG00000128708|ENST00000264108|HAT1 7.220250924428304 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15067 74.16 578.0 368010.0 25 0 19793.0 39992 VGCHGRGG 8 130 742.3411812259142 741.3339047593141 1 742.3400756716728 MULTI CID FTMS 0 0 0 15055 277583.5625 0.6994355962554925 -2 0.1663818359375 12 Unmodified _VGCHGRGG_ ENST00000356016.7_1_10:98592788-98592854:+|nuORF 5.760428011301431 0.7893668129297577 3 [{M(Oxidation (M))|F}T]D{M(Oxidation (M))|F}NV 6 8 + 56.673 0.0 0.0 7.6447 7.6447 84.925 0.0 0.0 0.0 2.87182151999351 2.87182151999351 2.87182151999351 2.87182151999351 0 1.0451140161145327 0.6989700043360187 0.8609243748081782 0.4247425010840047 [{M(Oxidation (M))|F}T]D{M(Oxidation (M))|F}NV;{M(Oxidation (M))|F}T{M(Oxidation (M))|F}DNV;[{M(Oxidation (M))|F}T]D{M(Oxidation (M))|F}GGV;{M(Oxidation (M))|F}T{M(Oxidation (M))|F}QAE;{[{M(Oxidation (M))|F}D]|MM}T{M(Oxidation (M))|F}NV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{M(Oxidation (M))|F}NV;{M(Oxidation (M))|F}T{M(Oxidation (M))|F}DGGV;{NN|[MP]|[D{I|L}]|[EV]}[HQ]MV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}MV;{[{M(Oxidation (M))|F}D]|MM}T{M(Oxidation (M))|F}GGV 7.6447;7.2573;5.8011;5.301;4.7146;4.5443;4.3171;3.7984;3.3846;2.871 -;-;-;-;-;-;-;-;-;- 1189 1 1.126 149321.0 1.0 9482 5583 15055 HBL1_DMSO_200M_050219_1,15067 HBL1_DMSO_200M_050219_1,15067,VGCHGRGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15068 74.173 659.0 217160.0 25 0 19983.0 -1 0 153 691.3235183250995 2070.9487255754984 3 691.3237182497978 MULTI CID FTMS 0 0 0 15055 180118.71875 0.2252200817666498 -7 0.5813674926757812 13 3 [YQ]{I|L}EN{[QD]|[EN]|[WG]|[KD]|[RS]}[NG]YNE 12 -1 29.967 0.0 0.0 1.447 0.0 0.0 0.0 600.2798772691109 600.2798772691109 0.3136603041947765 0.0 0.0 0.0 0 0.4247425010840047 0.9208187539523752 0.0 1.1307196863200843 [YQ]{I|L}EN{[QD]|[EN]|[WG]|[KD]|[RS]}[NG]YNE 1.447 - 1690 1 1.126 116383.3 1.0 9483 5583 15055 HBL1_DMSO_200M_050219_1,15068 HBL1_DMSO_200M_050219_1,15068, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15069 74.186 800.0 300650.0 25 0 28217.0 -1 0 149 959.113545178762 2874.318806136486 3 959.7775146365166 MULTI CID FTMS 0 0 0 15055 129649.578125 0.0515241053320667 15 -1.2244644165039062 14 3 [MN][HK]VYWQQGE 11 -1 25.692 0.0 0.0 0.89385 0.0 0.0 0.0 1470.6704656425984 1470.6704656425984 5.9895881055023 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3252574989159953 [MN][HK]VYWQQGE 0.89385 - 12311 1 1.126 157274.8 0.9700000286102296 9484 5583 15055 HBL1_DMSO_200M_050219_1,15069 HBL1_DMSO_200M_050219_1,15069, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15070 74.2 800.0 386730.0 25 0 107640.0 39476 VAQPVAAL 8 271 384.7328743180662 767.4511957029324 2 384.7328369021416 MULTI CID FTMS 0 0 0 15055 128270.0390625 0.6810790246826027 1 -0.13671875 15 Unmodified _VAQPVAAL_ ENSG00000161055|ENST00000292641|SCGB3A1;ENST00000512120.1_1_5:180017233-180018052:-|nuORF 11.114462752807354 0.7467182956244686 3 {[SA]|[TG]}AT 4 6 14.481 0.0 0.0 1.8869 0.0 0.0 0.0 434.2777498834594 434.2777498834594 0.9864468880481104 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {[SA]|[TG]}AT 1.8869 - 206 + 1 1.126 240203.8 0.5899999737739563 9485 5583 15055 HBL1_DMSO_200M_050219_1,15070 HBL1_DMSO_200M_050219_1,15070,VAQPVAAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15071 74.215 800.0 223080.0 25 0 6998.1 -1 0 138 1117.4747032805085 2232.934853627817 2 1117.977954089642 MULTI CID FTMS 0 0 0 15055 97885.9609375 0.135575242975829 -2 0.1663818359375 16 3 {[TV]|[{I|L}S]}AADTA{I|L}YN 10 -1 73.759 0.0 0.0 3.3032 0.0 0.0 0.0 1210.4466083487737 1210.4466083487737 39.311544221876666 0.0 0.0 0.0 0 1.0 1.2218487496163564 3.084121882396211 0.0 {[TV]|[{I|L}S]}AADTA{I|L}YN 3.3032 - 54017 1 1.126 112313.2 0.8600000143051147 9486 5583 15055 HBL1_DMSO_200M_050219_1,15071 HBL1_DMSO_200M_050219_1,15071, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15072 74.228 731.0 85043.0 25 0 9079.6 -1 0 116 651.9650498692346 0 652.2999145388603 PEAK CID FTMS 0 0 0 15055 98025.40625 1.0 0 0.0 17 3 T 1 -1 5.4846 0.0 0.0 0.42127 0.0 0.0 549.5312827445254 648.3282564752561 1197.8595392197817 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.42127 - 35 + 1 1.126 59710.2 1.0 9487 5583 15055 HBL1_DMSO_200M_050219_1,15072 HBL1_DMSO_200M_050219_1,15072, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15074 74.233 41.0 2142600.0 25 0 205520.0 + 15606 IPYSPDVQI 9 91 516.2741984091926 1030.5338438851852 2 516.2747070193291 MULTI CID FTMS 0 0 0 15073 1751008.125 0.1950628849299191 2 -0.128570556640625 1 Unmodified _IPYSPDVQI_ ENSG00000127463|ENST00000477853|EMC1;ENST00000461353.1_1_1:19545799-19546215:-|nuORF;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1 57.47134341890925 0.0274820932774257 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]{I|L}VQ{I|L} 9 2 + 58.355 0.0 0.0 5.6626 5.6626 74.879 0.0 0.0 0.0 2.2126599287422195 16.478174818886373 2.2126599287422195 0.2422750325201406 0 0.7742275032520141 0.9208187539523752 0.7302046884880937 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]{I|L}VQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[DP]VQ{I|L};{[QN]|[E{I|L}]|[KN]}V[DC]{I|L}VQ{I|L};[VP]D{I|L}S{M(Oxidation (M))|F}{I|L}Q{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]V{I|L}Q{I|L};[VP]DS{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[{I|L}P]YS[DP]VQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}S[DP]VQ{I|L};{[QN]|[E{I|L}]|[KN]}V[DC]V{I|L}Q{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]{I|L}V[AG]{I|L} 5.6626;5.6391;5.4479;5.4475;5.3402;5.2767;5.253;5.1761;5.1255;4.7691 -;-;-;-;-;-;+;-;-;- + 1117 1 1.152 70228.1 1.0 9488 5584 15073 HBL1_DMSO_200M_050219_1,15074 HBL1_DMSO_200M_050219_1,15074,IPYSPDVQI True True IPYSPDVQI 74.23303 516.274707019329 102007064.0 15073.0 ENSG00000127463|ENST00000477853|EMC1;;ENST00000461353.1_1_1:19545799-19546215:-|nuORF;;nc|ENSG00000127463|Q8N766-4|EMC1;;nc|ENSG00000127463|Q8N766-2|EMC1;;nc|ENSG00000127463|Q8N766-3|EMC1 1.731801003838579 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15075 74.235 58.0 3430300.0 25 0 282620.0 + 44054 YIPTELDQV 9 158 539.276352257802 1076.538151582404 2 539.2769042849541 MULTI CID FTMS 0 0 0 15073 1190212.0 0.137209594014946 6 -0.4863739013671875 2 Unmodified _YIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 50.855029805455786 0.0384952370514206 3 [TP]E{I|L}DQVY{I|L} 9 4 + 62.787 0.0 0.0 5.8323 5.8323 83.294 0.0 0.0 0.0 9.222643983666543 5.004311474114331 5.004311474114331 5.409642006596677 0 0.0242275032520141 1.3010299956639813 1.8441876774005248 0.0 [TP]E{I|L}DQVY{I|L};[TP]E{I|L}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VP;[TP]E{I|L}D[AG]VY{I|L};[EP]T{I|L}DQVY{I|L};[EP]T{I|L}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VP;[TP]E{I|L}DVE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[EP]T{I|L}D[AG]VY{I|L};{[ET]|[MV]}P{I|L}DQVY{I|L};[EP]T{I|L}DVE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]}[QT]EPV 5.8323;5.3298;4.9769;4.9756;4.4731;4.3199;4.1202;3.8502;3.4632;3.4282 -;-;-;-;-;-;-;-;-;- 3242 1 1.152 155647.7 1.0 9489 5584 15073 HBL1_DMSO_200M_050219_1,15075 HBL1_DMSO_200M_050219_1,15075,YIPTELDQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15076 74.236 63.0 4469500.0 25 0 342180.0 + + 6424 EAAEVILRV 9 156 500.292775463261 998.570997993322 2 500.2940246462822 MULTI CID FTMS 0 0 0 15073 2973670.75 0.6088328309838089 -1 0.13671875 3 Unmodified _EAARGARRI_ nc|ENSG00000166226|P78371-2|CCT2;ENST00000550653.1_1_12:69993626-69995102:+|nuORF;ENSG00000166226|ENST00000299300|CCT2 43.85829265575387 0.0542763391141878 3 EAAEV{I|L}RV{I|L} 9 -1 + 95.108 0.0 0.0 9.5244 9.5244 86.698 0.0 0.0 0.0 31.261387234537864 4.093341517258509 4.093341517258509 2.38515397773476 0 1.3996498648046138 1.6989700043360187 0.4247425010840047 0.2742275032520141 EAAEV{I|L}RV{I|L};EAAEV{I|L}VR{I|L};EAAEV{I|L}{I|L}RV;EAAVE{I|L}RV{I|L};EAAVE{I|L}VR{I|L};EAAEV{I|L}{I|L}VR;EAAVE{I|L}{I|L}RV;EAAEVV{I|L}R{I|L};EAAEV{I|L}R{I|L}V;EAAVE{I|L}{I|L}VR 9.5244;9.2856;9.1145;8.9581;8.7192;8.6879;8.5482;8.5332;8.3238;8.1216 -;-;-;-;-;-;-;-;-;- 3147 + 1 1.152 218102.3 1.0 9490 5584 15073 HBL1_DMSO_200M_050219_1,15076 HBL1_DMSO_200M_050219_1,15076,EAARGARRI False False EAAEVILRV 74.23603 500.294024646282 17245466.0 15073.0 nc|ENSG00000166226|P78371-2|CCT2;;ENST00000550653.1_1_12:69993626-69995102:+|nuORF;;ENSG00000166226|ENST00000299300|CCT2 4.39287010828654 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15077 74.237 50.0 5039500.0 25 0 483300.0 + 38689 TTMLVEIGNCM 11 128 606.2781260152229 1210.5416990972458 2 606.2787353396416 MULTI CID FTMS 0 0 0 15073 2634068.75 0.7195389962406161 -1 0.13671875 4 Unmodified _TTMLVEIGNCM_ REV__ENST00000235382.6_1_1:192781079-192781220:+|nuORF 19.361941925380144 0.6323962752489956 3 {I|L}PSM 4 -1 38.849 0.0 0.0 3.2092 0.0 0.0 764.3217575932287 0.0 764.3217575932287 0.0 9.553571057755036 0.0 0.0 0 0.8807196863200843 0.0 0.5629529932484498 0.0 {I|L}PSM 3.2092 - 270 + 1 1.152 184459.8 1.0 9491 5584 15073 HBL1_DMSO_200M_050219_1,15077 HBL1_DMSO_200M_050219_1,15077,TTMLVEIGNCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15078 74.239 77.0 1341100.0 25 0 142500.0 + 42053 VQVESVNLQV 10 111 557.8091446620485 1113.603736390897 2 557.8094970583916 MULTI CID FTMS 0 0 0 15073 2466809.75 0.8908911006585952 -1 0.13671875 5 Unmodified _VQVESVNLQV_ ENSG00000070010|ENST00000263202|UFD1;ENST00000459854.5_1_22:19442175-19463025:-|nuORF;ENST00000489406.1_1_22:19455337-19466647:-|nuORF;nc|ENSG00000070010|Q92890-1|UFD1;nc|ENSG00000070010|Q92890-3|UFD1 96.36657018975838 0.0088773658760237 3 {[QV]|[N{I|L}]|[RA]|[KV]}VESVN{I|L}QV 10 0 + 87.986 0.0 0.0 7.901 7.901 83.619 0.0 0.0 0.0 16.27591022965298 8.819459175083608 8.819459175083608 1.6243799541645956 0 0.778659694992122 1.154901959985743 1.5941876774005248 0.7302046884880937 + + {[QV]|[N{I|L}]|[RA]|[KV]}VESVN{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VSEVN{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}EVSVN{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VSD{I|L}N{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VESNV{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VESVGG{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VSENV{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}EVSNV{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VSVEN{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VSEVGG{I|L}QV 7.901;7.7551;7.7468;7.148;7.0911;7.078;6.9453;6.937;6.9334;6.9322 +;-;-;-;-;-;-;-;-;- + 3226 1 1.152 86873.4 1.0 9492 5584 15073 HBL1_DMSO_200M_050219_1,15078 HBL1_DMSO_200M_050219_1,15078,VQVESVNLQV True True VQVESVNLQV 74.239147 557.809497058392 22719434.0 15073.0 ENSG00000070010|ENST00000263202|UFD1;;ENST00000459854.5_1_22:19442175-19463025:-|nuORF;;nc|ENSG00000070010|Q92890-3|UFD1;;nc|ENSG00000070010|Q92890-1|UFD1;;ENST00000489406.1_1_22:19455337-19466647:-|nuORF 6.711447238922119 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15079 74.241 76.0 2080000.0 25 0 184370.0 + 41563 VPPEILNNV 9 140 497.7822691072368 993.5499852812736 2 497.7827026247978 MULTI CID FTMS 0 0 0 15073 1901732.0 0.1351190220324068 11 -0.9441070556640624 6 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 68.08070601005525 0.0218408846571049 3 [VP]PE{I|L}{I|L}NNV 9 0 + 70.033 0.0 0.0 7.0487 7.0487 85.689 0.0 0.0 0.0 4.771212547196626 12.969837217489513 4.771212547196626 4.2609125905568135 0 1.024227503252014 2.0 0.25 0.0 + + [VP]PE{I|L}{I|L}NNV;[VP]PE{I|L}QVNV;[EP]{I|L}PV{I|L}NNV;[EP]P{I|L}V{I|L}NNV;[EP]{I|L}PVQVNV;[VP]PE{I|L}{I|L}GGNV;[VP]PE{I|L}{I|L}NGGV;[VP]PE{I|L}QNVV;[EP]{I|L}P{I|L}VNNV;[EP]PV{I|L}{I|L}NNV 7.0487;6.6199;6.5685;6.2655;6.1396;6.1219;6.1219;6.0395;6.0139;5.9625 +;-;-;-;-;-;-;-;-;- + 4629 1 1.152 121410.3 1.0 9493 5584 15073 HBL1_DMSO_200M_050219_1,15079 HBL1_DMSO_200M_050219_1,15079,VPPEILNNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15080 74.243 103.0 2595600.0 25 0 280170.0 + 2959 AVIDGEFKEL 10 163 560.7983878306327 1119.5822227280653 2 560.7987548708916 MULTI CID FTMS 0 0 0 15073 1646565.875 0.5037817688779043 -1 0.13671875 7 Unmodified _AVIDGEFKEL_ ENSG00000123131|ENST00000379341|PRDX4 74.19965305603844 0.0188013450058842 3 {[VA]|[{I|L}G]}AYEGD{I|L}{I|L}G{I|L} 11 7 + 65.307 0.0 0.0 5.8332 5.8332 77.454 0.0 0.0 0.0 17.25860834290478 14.377456216434346 14.377456216434346 1.332946754800382 0 0.5 2.0 1.4960762528683704 0.0 {[VA]|[{I|L}G]}AYEGD{I|L}{I|L}G{I|L};{[VA]|[{I|L}G]}AYGED{I|L}{I|L}G{I|L};{[VA]|[{I|L}G]}AYEG{I|L}D{I|L}G{I|L};{[VA]|[{I|L}G]}AYGE{I|L}D{I|L}G{I|L};{[VA]|[{I|L}G]}AYGDE{I|L}{I|L}G{I|L};{[VA]|[{I|L}G]}AYEGVE{I|L}G{I|L};{[VA]|[{I|L}G]}AYGEVE{I|L}G{I|L};{[VA]|[{I|L}G]}[YQ]ED{I|L}{I|L}G{I|L};{[VA]|[{I|L}G]}[YQ]E{I|L}D{I|L}G{I|L};{[VA]|[{I|L}G]}AYGD{I|L}E{I|L}G{I|L} 5.8332;5.7141;5.3348;5.2157;5.2003;5.0744;4.9554;4.9537;4.4553;4.4415 -;-;-;-;-;-;-;-;-;- 15650 1 1.152 210907.0 1.0 9494 5584 15073 HBL1_DMSO_200M_050219_1,15080 HBL1_DMSO_200M_050219_1,15080,AVIDGEFKEL True True AVIDGEFKEL 74.243118 560.798754870892 19895630.0 15073.0 ENSG00000123131|ENST00000379341|PRDX4 5.399416446685791 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15081 74.246 131.0 1382600.0 25 0 89550.0 + 13507 HMMPDLPNV 9 145 527.2455325528683 1052.4765121725366 2 527.2465698122978 MULTI CID FTMS 0 0 0 15073 1523620.75 0.6677549969458163 -1 0.13671875 8 Unmodified _HMMPDLPNV_ ENSG00000134014|ENST00000256398|ELP3;nc|ENSG00000134014|Q9H9T3-2|ELP3;nc|ENSG00000134014|Q9H9T3-4|ELP3;nc|ENSG00000134014|Q9H9T3-5|ELP3 67.34385681178166 0.0221257235307089 3 [DP]M{I|L}HMPNV 9 5 + 56.357 0.0 0.0 5.3547 5.3547 75.359 0.0 0.0 0.0 7.479317670624688 16.140078085766092 7.479317670624688 1.0340874929963917 0 1.718765315847925 0.7695510786217261 0.5610312860818771 0.0 [DP]M{I|L}HMPNV;[DP]{I|L}MHMPNV;[DP]{I|L}HMMPNV;[DP]M{I|L}MHPNV;[DP]{I|L}MMHPNV;[HM]M[DP]{I|L}PNV;[DP]M[HM]{I|L}PNV;[{I|L}P]DMHMPNV;[{I|L}P]DHMMPNV;{NN|[MP]|[D{I|L}]|[EV]}PMHMPNV 5.3547;5.2565;4.9704;4.8378;4.7395;4.6441;4.5069;4.1169;3.8308;3.7388 -;-;-;-;-;+;-;-;-;- + 2764 1 1.152 159769.0 1.0 9495 5584 15073 HBL1_DMSO_200M_050219_1,15081 HBL1_DMSO_200M_050219_1,15081,HMMPDLPNV True True HMMPDLPNV 74.245803 527.246569812298 19758652.0 15073.0 nc|ENSG00000134014|Q9H9T3-5|ELP3;;nc|ENSG00000134014|Q9H9T3-2|ELP3;;ENSG00000134014|ENST00000256398|ELP3;;nc|ENSG00000134014|Q9H9T3-4|ELP3 7.459386984507243 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15082 74.248 103.0 1442500.0 25 0 135310.0 + 22300 LPSDEDESL 9 145 502.7239677952796 1003.4333826573592 2 502.7241088747978 MULTI CID FTMS 0 0 0 15073 1462991.5 1.0 0 0.0 9 Unmodified _LPSDEDESL_ REV__ENSG00000156983|ENST00000383829|BRPF1;REV__nc|ENSG00000156983|P55201-3|BRPF1;REV__nc|ENSG00000156983|P55201-4|BRPF1;REV__nc|ENSG00000156983|P55201|BRPF1 18.13498045792455 0.3457906370836843 3 [QP]YVTPV 7 -1 38.07 0.0 0.0 3.794 0.0 0.0 0.0 216.0001300540968 216.0001300540968 15.349407118798126 0.0 0.0 0.0 0 0.0 0.638272163982407 0.7742275032520141 0.0 [QP]YVTPV 3.794 - 2129 1 1.152 113909.6 1.0 9496 5584 15073 HBL1_DMSO_200M_050219_1,15082 HBL1_DMSO_200M_050219_1,15082,LPSDEDESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15083 74.253 261.0 976600.0 25 0 186620.0 + 22448 LPTVHSII 8 141 440.2686879136037 878.5228228940075 2 440.2686340212822 MULTI CID FTMS 0 0 0 15073 1127771.875 0.2565511986867745 -6 0.5468063354492188 10 Unmodified _LPTVHSII_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 93.88341677533236 0.0679596620250313 3 [{I|L}P]SHS{I|L}{I|L}{I|L} 8 3 + 75.729 0.0 0.0 8.62 8.62 84.587 0.0 0.0 0.0 1.5703855378775131 14.024174299985006 1.5703855378775131 1.5703855378775131 0 1.1307196863200843 2.0 1.360924374808178 0.0 [{I|L}P]SHS{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}HPS{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}HSP{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}PHS{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}HS{I|L}P{I|L}{I|L};[{I|L}P]SH{I|L}S{I|L}{I|L};{I|L}PTVHS{I|L}{I|L};[HV]TPS{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}HP{I|L}S{I|L}{I|L};[HV]TSP{I|L}{I|L}{I|L} 8.62;8.4412;8.2518;7.4147;7.3706;7.3409;7.1901;7.1832;7.1621;6.9938 -;-;-;-;-;-;+;-;-;- + 1418 1 1.152 197813.2 1.0 9497 5584 15073 HBL1_DMSO_200M_050219_1,15083 HBL1_DMSO_200M_050219_1,15083,LPTVHSII True True LPTVHSII 74.252834 440.268634021282 55351560.0 15073.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 1.773298740386963 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15084 74.258 309.0 279360.0 25 0 19892.0 + 15038 ILVEARGRARG 11 136 599.361735480312 1196.7089180274238 2 599.3622314333916 MULTI CID FTMS 0 0 0 15073 931648.6875 0.1923224472598838 -12 0.8027114868164062 11 Unmodified _ILVEARGRARG_ REV__ENSG00000166986|ENST00000262027|MARS1;REV__ENST00000447721.6_1_12:57881873-57905922:+|nuORF;REV__ENST00000546481.1_1_12:57881846-57882986:+|nuORF;REV__ENST00000550449.5_1_12:57881846-57883182:+|nuORF;REV__ENST00000551842.5_1_12:57881873-57883359:+|nuORF;REV__ENST00000553162.5_1_12:57881873-57883795:+|nuORF;REV__nc|ENSG00000166986|P56192-2|MARS1 6.2057823575117 0.8458686499021061 3 Y 1 -1 11.783 0.0 0.0 0.9846 0.0 0.0 1015.6344073846489 0.0 1015.6344073846489 0.0 2.574549078045312 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.9846 - 180 + 1 1.152 67378.6 1.0 9498 5584 15073 HBL1_DMSO_200M_050219_1,15084 HBL1_DMSO_200M_050219_1,15084,ILVEARGRARG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15085 74.265 333.0 665260.0 25 0 138750.0 615 AEKLFLEKLS 10 169 589.342962126194 1176.671371319188 2 589.3433715701103 MULTI CID FTMS 0 0 0 15073 844474.0625 0.173974036693477 -6 0.5468063354492188 12 Unmodified _AEKLFLEKLS_ ENSG00000150676|ENST00000342404|CCDC83;nc|ENSG00000150676|Q8IWF9-2|CCDC83 2.735195868890462 0.713984610296514 3 {I|L} 1 9 9.3971 0.0 0.0 0.79862 0.0 0.0 1045.576383381491 0.0 1045.576383381491 0.0 0.1889428044469987 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.79862 + + 114 + 1 1.152 168925.1 1.0 9499 5584 15073 HBL1_DMSO_200M_050219_1,15085 HBL1_DMSO_200M_050219_1,15085,AEKLFLEKLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15086 74.271 334.0 280770.0 25 0 15202.0 23560 LTLSTGFRVI 10 166 553.8316687177116 1105.6487845022232 2 555.3358642458916 MULTI CID FTMS 0 0 0 15073 819151.3125 0.3216709476211055 2 -0.128570556640625 13 Unmodified _LTLSTGFRVI_ ENSG00000168209|ENST00000307365|DDIT4 6.723162845929126 0.6955379296933136 3 {I|L} 1 9 11.783 0.0 0.0 1.0657 0.0 0.0 974.5538881172608 0.0 974.5538881172608 0.0 1.867903314062964 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0657 + + 397 + 1 1.152 75758.7 1.0 9500 5584 15073 HBL1_DMSO_200M_050219_1,15086 HBL1_DMSO_200M_050219_1,15086,LTLSTGFRVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15087 74.277 355.0 658000.0 25 0 81752.0 + 9582 FLKDKFVEI 9 192 380.2218782634348 1137.6438053905042 3 380.2213928103447 MULTI CID FTMS 0 0 0 15073 758445.375 0.4181219583106242 2 -0.128570556640625 14 Unmodified _FLKDKFVEI_ ENSG00000197943|ENST00000564138|PLCG2;ENST00000567980.5_1_16:81819579-81955027:+|nuORF;ENST00000569929.5_1_16:81888133-81917132:+|nuORF 35.61225514009592 0.0995432151795903 3 {[QN]|[E{I|L}]|[KN]}[Y{I|L}]VE{I|L}{M(Oxidation (M))|F}{I|L} 9 7 + 32.229 0.0 0.0 2.8329 2.8329 69.309 0.0 0.0 0.0 1.7284006891749435 5.252859780705343 1.7284006891749435 1.7284006891749435 0 0.5242275032520141 0.4559319556497244 1.263879331962458 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}[Y{I|L}]VE{I|L}{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}K{M(Oxidation (M))|F}VE{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[Y{I|L}]{I|L}D{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KE{I|L}{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}K{M(Oxidation (M))|F}{I|L}D{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[Y{I|L}]{I|L}EV{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[Y{I|L}]V{I|L}E{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[Y{I|L}]{I|L}{M(Oxidation (M))|F}VE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}K{M(Oxidation (M))|F}{I|L}EV{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RH]PE{I|L}{M(Oxidation (M))|F}{I|L} 2.8329;2.681;2.1592;2.1535;2.0073;1.9159;1.8042;1.7871;1.764;1.7279 -;-;-;-;-;-;-;-;-;- 2215 1 1.152 186503.7 1.0 9501 5584 15073 HBL1_DMSO_200M_050219_1,15087 HBL1_DMSO_200M_050219_1,15087,FLKDKFVEI True False FLKDKFVEI 74.276995 380.221392810345 12628181.0 15073.0 ENST00000569929.5_1_16:81888133-81917132:+|nuORF;;ENST00000567980.5_1_16:81819579-81955027:+|nuORF;;ENSG00000197943|ENST00000564138|PLCG2 1.7895381450653076 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15088 74.284 374.0 690180.0 25 0 73958.0 + 18136 KTMEDTLMTV 10 194 584.782653251757 1167.550753570314 2 584.7840453982353 MULTI CID FTMS 0 0 0 15073 721737.6875 0.3266630567538937 -1 0.13671875 15 Unmodified _KTMEDTLMTV_ ENSG00000132254|ENST00000396777|ARFIP2;nc|ENSG00000132254|P53365-2|ARFIP2;nc|ENSG00000132254|P53365-3|ARFIP2 84.5221896805406 0.0133617038110099 3 [MT]KEDT{I|L}MTV 10 2 + 99.078 0.0 0.0 8.486 8.486 85.441 0.0 0.0 0.0 4.36492192988284 16.53212513775344 4.36492192988284 2.174839442139074 0 0.9247425010840048 1.3010299956639813 2.5673851849885576 0.0 [MT]KEDT{I|L}MTV;[MT]V{[SA]|[TG]}DT{I|L}MTV;{[TV]|[{I|L}S]}M{[SA]|[TG]}DT{I|L}MTV;{[TV]|[{I|L}S]}EEMTKMTV;[MT]VEETKMTV;[MT]VE[SG]T{I|L}MTV;[MT]{I|L}[SG]DT{I|L}MTV;{[TV]|[{I|L}S]}MEETKMTV;{[TV]|[{I|L}S]}ME[SG]T{I|L}MTV;{NN|[MP]|[D{I|L}]|[EV]}TEMTKMTV 8.486;8.2997;8.1121;7.7817;7.7498;7.7116;7.5759;7.5622;7.524;7.4137 -;-;-;-;-;-;-;-;-;- 51745 1 1.152 197999.4 1.0 9502 5584 15073 HBL1_DMSO_200M_050219_1,15088 HBL1_DMSO_200M_050219_1,15088,KTMEDTLMTV True True KTMEDTLMTV 74.283726 584.784045398235 48352563.0 15073.0 nc|ENSG00000132254|P53365-3|ARFIP2;;ENSG00000132254|ENST00000396777|ARFIP2;;nc|ENSG00000132254|P53365-2|ARFIP2 7.152163823445638 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15089 74.291 392.0 261240.0 25 0 13245.0 + 23971 LVSQLDPLRL 10 157 577.348694700692 1152.682836468184 2 577.3490478396416 MULTI CID FTMS 0 0 0 15073 672290.0 0.351730140544388 2 -0.128570556640625 16 Unmodified _LVSQLDPLRL_ REV__ENST00000361690.7_1_6:35838234-35840420:-|nuORF 5.296884461304476 0.7021353017287152 3 Y 1 -1 12.218 0.0 0.0 1.06 0.0 0.0 971.6084478957216 0.0 971.6084478957216 0.0 0.7985042143375587 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.06 - 385 + 1 1.152 80783.9 1.0 9503 5584 15073 HBL1_DMSO_200M_050219_1,15089 HBL1_DMSO_200M_050219_1,15089,LVSQLDPLRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15090 74.295 148.0 1898000.0 25 0 162480.0 + 44510 YPDGRIIMV 9 195 532.2839278741702 1062.5533028151403 2 532.2841674685478 MULTI CID FTMS 0 0 0 15073 674149.375 0.281955136824592 -6 0.5468063354492188 17 Unmodified _YPDGRIIMV_ ENSG00000141446|ENST00000269214|ESCO1 55.50274090549119 0.0285720310785888 3 YPD{I|L}V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VV 9 5 + 52.864 0.0 0.0 4.9752 4.9752 73.853 0.0 0.0 0.0 19.04137196990463 3.908103009885764 3.908103009885764 0.9691001300805624 0 0.8882104921644451 1.5228787452803376 0.2614393726401688 0.0 YPD{I|L}V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VV;YPDV{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VV;YPD{I|L}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;YPDV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;YPD{I|L}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};YPDV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DRG{I|L}{I|L}MV;[{I|L}V]YY{I|L}YMV;[DP]{[NV]|[RG]}{I|L}{I|L}YMV;YVV{[RE]|[WV]}[PA]MV 4.9752;4.884;4.8012;4.6871;4.1408;4.0268;3.9817;3.353;3.1193;3.0792 -;-;-;-;-;-;-;-;-;- 4099 + 1 1.152 223017.3 1.0 9504 5584 15073 HBL1_DMSO_200M_050219_1,15090 HBL1_DMSO_200M_050219_1,15090,YPDGRIIMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15091 74.296 46.0 2843300.0 25 0 397590.0 + 154 AALPVNVKI 9 113 462.79727144612696 923.579989959054 2 462.7973510622978 MULTI CID FTMS 0 0 0 15073 652352.75 0.4404395532428479 -1 0.13671875 18 Unmodified _AALPVNVKI_ ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF 39.957323273325 0.0756908302845263 3 AA{I|L}PVNVK{I|L} 9 0 + 48.566 0.0 0.0 5.2584 5.2584 85.247 0.0 0.0 0.0 10.355994895545251 9.999999999999991 9.999999999999991 9.208187539523747 0 1.110924374808178 1.154901959985743 0.0 0.0 + + AA{I|L}PVNVK{I|L};AA{I|L}PVGGVK{I|L};AA{I|L}PVN[K{I|L}]V;AA{I|L}PVGG[K{I|L}]V 5.2584;4.2614;4.1757;3.1786 +;-;-;- + 468 + 1 1.152 104316.5 1.0 9505 5584 15073 HBL1_DMSO_200M_050219_1,15091 HBL1_DMSO_200M_050219_1,15091,AALPVNVKI True True AALPVNVKI 74.296153 462.797351062298 18860102.0 15073.0 ENSG00000067248|ENST00000251636|DHX29;;ENST00000504778.5_1_5:54552318-54579000:-|nuORF 3.830918312072754 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15092 74.297 49.0 1155800.0 25 0 209820.0 + 12546 GVGTILSNVL 10 94 486.7906182720745 971.566683610949 2 486.7912170290947 MULTI CID FTMS 0 0 0 15073 522674.125 0.1750650350905207 2 -0.128570556640625 19 Unmodified _GVGTILSNVL_ ENSG00000111490|ENST00000539867|TBC1D30;nc|ENSG00000288591|Q9Y2I9-3|TBC1D30 32.30548876998284 0.2428506522065767 3 {I|L}{I|L}[NS]{I|L}[NS]V{I|L} 9 5 + 25.101 0.0 0.0 2.5836 2.5836 70.181 0.0 0.0 0.0 2.438227252637226 6.575117715326364 2.438227252637226 2.438227252637226 0 0.5924778212679485 1.5228787452803376 0.6549471895720984 0.3807196863200844 {I|L}{I|L}[NS]{I|L}[NS]V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[VA]|[{I|L}G]}[TP]V{I|L};{I|L}{I|L}[NS][WK]V{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}[TP]V{I|L};{I|L}{I|L}[NS]N{[TV]|[{I|L}S]}V{I|L};{I|L}{I|L}[NS]S{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L};{[DA]|[EG]}[K{I|L}]{I|L}[NS]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]{I|L}[NS]V{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[NS]V{I|L};{[DA]|[EG]}[K{I|L}][WK]V{I|L} 2.5836;2.3326;2.2267;2.1872;2.174;2.0925;2.0166;1.895;1.7827;1.6596 -;-;-;-;-;-;-;-;-;- 310 1 1.152 51699.9 1.0 9506 5584 15073 HBL1_DMSO_200M_050219_1,15092 HBL1_DMSO_200M_050219_1,15092,GVGTILSNVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15093 74.3 100.0 444770.0 25 0 50775.0 + -1 AFVCGRML 8 92 477.238610704035 0 476.7532226443291 PEAK CID FTMS 0 0 0 -1 0 20 Carbamidomethyl (C) _AFVC(Carbamidomethyl (C))GRML_ REV__ENST00000609281.1_1_7:105926403-105926484:+|nuORF 10.183394434864962 0.5394990767616434 3 P{I|L} 2 -1 10.969 0.0 0.0 1.1517 0.0 0.0 112.94017884212424 626.3619478815061 739.3021267236304 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L} 1.1517 - 56 + 1 1.152 38016.7 1.0 9507 5584 15073 HBL1_DMSO_200M_050219_1,15093 HBL1_DMSO_200M_050219_1,15093,AFVCGRML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15095 74.304 0.78 50289000.0 25 0 12370000.0 + 4065 DAMKYTIVV 9 63 520.2782689739805 1038.541985014761 2 520.2798339724541 MULTI CID FTMS 0 0 0 15094 68953400.0 1.0 0 0.0 1 Unmodified _DAMKYTIVV_ ENSG00000152234|ENST00000398752|ATP5F1A;nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A 27.628801355627647 0.1796483985696185 3 YT{I|L}VV 5 4 38.896 0.0 0.0 3.7452 0.0 0.0 445.19883925605626 0.0 445.19883925605626 0.0 23.41129063296272 0.0 0.0 0 0.8182503180159344 0.0 0.8494850021680094 0.0 + YT{I|L}VV 3.7452 + + 30 1 1.158 37770.3 1.0 9508 5585 15094 HBL1_DMSO_200M_050219_1,15095 HBL1_DMSO_200M_050219_1,15095,DAMKYTIVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15096 74.305 4.8 13429000.0 25 0 1419700.0 + 27637 PLGRRPLV 8 70 454.29676580483147 0 454.2984191775322 PEAK CID FTMS 0 0 0 15094 8265217.0 0.5584962311109574 3 -0.3011474609375 2 Unmodified _PLGRRPLV_ REV__ENST00000391860.6_3_1:230486830-230492856:-|nuORF 15.768221252438446 0.4767174489346095 3 P{I|L}KN{[SA]|[TG]}{I|L} 7 -1 15.438 0.0 0.0 1.7029 0.0 0.0 114.09220212542694 66.03573785953358 180.1279399849605 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 P{I|L}KN{[SA]|[TG]}{I|L} 1.7029 - 105 + 1 1.158 54030.7 1.0 9509 5585 15094 HBL1_DMSO_200M_050219_1,15096 HBL1_DMSO_200M_050219_1,15096,PLGRRPLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15097 74.306 4.7 8030600.0 25 0 1059400.0 + 6269 DTVEPWVKV 9 63 536.787520797261 1071.560488661322 2 536.7876464724541 MULTI CID FTMS 0 0 0 15094 10392740.0 0.0331732711419219 12 -0.953887939453125 3 Unmodified _DTVEPWVKV_ REV__ENSG00000155275|ENST00000389737|TRMT44;REV__nc|ENSG00000155275|Q8IYL2-2|TRMT44 20.453626601364224 0.2830276176381075 3 [EP]WVKVDTV 9 -1 + 64.051 0.0 0.0 5.9774 5.9774 90.337 0.0 0.0 0.0 16.100067642479345 42.79676584209078 16.100067642479345 17.659167939666318 0 0.5 1.0457574905606752 0.0 0.0 [EP]WVKVDTV;{[RE]|[WV]}[EP]KVDTV;[EP]WVD{[TV]|[{I|L}S]}KV;{[RE]|[WV]}[TP]RVDTV;{[MG]|[TS]}[HS]VKVDTV;[W{M(Oxidation (M))|F}]VR[HQ]TV;{[RE]|[WV]}[TP][VG]VDTV;{[RE]|[WV]}D{[TV]|[{I|L}S]}[RP]TV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP]RVDTV;{[RE]|[WV]}D[EP]{[TV]|[{I|L}S]}KV 5.9774;4.3294;4.3228;4.0485;3.9778;3.3831;3.1891;2.9057;2.7439;2.72 -;-;-;-;-;-;-;-;-;- 311 1 1.158 35097.3 1.0 9510 5585 15094 HBL1_DMSO_200M_050219_1,15097 HBL1_DMSO_200M_050219_1,15097,DTVEPWVKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15098 74.307 18.0 2908100.0 25 0 945580.0 -1 CIFLDEQCCFY 11 59 777.8067631544496 1553.5989733756992 2 777.8073608279228 MULTI CID FTMS 0 0 0 15094 2618956.25 0.2151967295795516 -3 0.262451171875 4 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))IFLDEQC(Carbamidomethyl (C))C(Carbamidomethyl (C))FY_ HERVFH21-int_dup68|chrX:64848898-64850686:+|1.1618635505066113|0.1868304972504996|2.64|46.0|9|1|sense 1.3295316138638542 0.8688751186870782 3 DYV[NG]YYYY 9 -1 39.521 0.0 0.0 2.5438 0.0 0.0 335.11189467597814 0.0 335.11189467597814 0.0 22.28519652019696 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.805462187404089 DYV[NG]YYYY 2.5438 - 323 1 1.158 43883.8 1.0 9511 5585 15094 HBL1_DMSO_200M_050219_1,15098 HBL1_DMSO_200M_050219_1,15098,CIFLDEQCCFY False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 15099 74.308 35.0 1502400.0 25 0 247580.0 11923 GMAALVLR 8 75 415.74929395932594 829.4840349854519 2 415.7494384646416 MULTI CID FTMS 0 0 0 15094 1921453.875 0.9167038398241644 1 -0.05755615234375 5 Unmodified _GMAALVLR_ ENSG00000143554|ENST00000624995|SLC27A3;ENST00000368660.1_1_1:153751554-153752475:+|nuORF;ENST00000468403.1_1_1:153751697-153752222:+|nuORF;ENST00000483574.6_1_1:153751589-153752475:+|nuORF;nc|ENSG00000143554|Q5K4L6-2|SLC27A3 26.34127834903884 0.4900704351052977 3 MGAVA{I|L}[R{I|L}] 8 4 + 70.623 0.0 0.0 8.514 8.514 86.848 0.0 0.0 0.0 56.64320017660792 7.742275032520141 7.742275032520141 3.0102999566398125 0 1.0 1.2218487496163564 0.0 0.4247425010840047 MGAVA{I|L}[R{I|L}];MGA{I|L}G{I|L}[R{I|L}];MGAV{I|L}A[R{I|L}];MGA{I|L}VA[R{I|L}];MQVA{I|L}[R{I|L}];MQ{I|L}G{I|L}[R{I|L}];MQV{I|L}A[R{I|L}];MG[Q{I|L}]{I|L}[R{I|L}];MQ{I|L}VA[R{I|L}];M{I|L}NA{I|L}[R{I|L}] 8.514;8.1511;8.1511;7.7882;5.6655;5.3026;5.3026;5.2409;4.9397;4.6998 -;-;-;-;-;-;-;-;-;- 151 + 1 1.158 52454.3 1.0 9512 5585 15094 HBL1_DMSO_200M_050219_1,15099 HBL1_DMSO_200M_050219_1,15099,GMAALVLR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15100 74.31 47.0 626270.0 25 0 56668.0 + -1 LAAAVMAVFVR 11 65 582.3353301673142 1162.6561074014282 2 582.3354980349541 MULTI CID FTMS 0 0 0 15094 1570529.875 0.2994236752017473 -5 0.4509353637695312 6 Oxidation (M) _LAAAVM(Oxidation (M))AVFVR_ REV__ENSG00000107984|ENST00000373970|DKK1 1.4819007175156935 0.86815623132643 3 C(Carbamidomethyl (C)) 1 -1 6.9897 0.0 0.0 0.60118 0.0 0.0 420.2573780086532 579.3274019830686 999.584779991722 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.60118 - 9 + 1 1.158 30742.6 1.0 9513 5585 15094 HBL1_DMSO_200M_050219_1,15100 HBL1_DMSO_200M_050219_1,15100,LAAAVMAVFVR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15101 74.311 40.0 1591700.0 25 0 351590.0 + 31559 RQLESMIRL 9 64 573.3269323007246 1144.639311668249 2 573.3267089724541 MULTI CID FTMS 0 0 0 15094 851470.8125 0.8735519117554084 -2 0.207733154296875 7 Unmodified _RQLESMIRL_ ENSG00000076003|ENST00000264156|MCM6 7.477065608646677 0.6536635950281682 3 [VG]Q 3 9 20.207 0.0 0.0 1.7654 0.0 0.0 0.0 857.4569796197874 857.4569796197874 6.0020550768615255 0.0 0.0 0.0 0 0.3807196863200844 1.2218487496163564 0.0 0.0 [VG]Q 1.7654 - 29 + 1 1.158 56548.5 1.0 9514 5585 15094 HBL1_DMSO_200M_050219_1,15101 HBL1_DMSO_200M_050219_1,15101,RQLESMIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15102 74.313 72.0 787220.0 25 0 134070.0 18907 LAVVREGR 8 86 450.2748616592415 898.535170385283 2 450.2750121951103 MULTI CID FTMS 0 0 0 15094 757033.625 0.0489429202846398 12 -0.953887939453125 8 Unmodified _LAVVREGR_ ENSG00000064687|ENST00000263094|ABCA7;ENST00000525939.1_1_19:1062261-1063875:+|nuORF;nc|ENSG00000064687|Q8IZY2-2|ABCA7 0.7936320650641473 0.8195151834710337 3 V 1 7 10.713 0.0 0.0 1.1923 0.0 0.0 781.4557082654572 0.0 781.4557082654572 0.0 0.4357508785945008 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1923 + + 20 + 1 1.158 50899.3 1.0 9515 5585 15094 HBL1_DMSO_200M_050219_1,15102 HBL1_DMSO_200M_050219_1,15102,LAVVREGR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15103 74.315 108.0 836510.0 25 0 145780.0 -1 0 137 363.2379643125351 362.2306878459351 1 363.2374755740166 MULTI CID FTMS 0 0 0 15094 660040.8125 0.4760650553161503 7 -0.5797195434570312 9 3 {I|L} 1 -1 8.7724 0.0 0.0 2.4218 0.0 0.0 231.13557783792567 0.0 231.13557783792567 0.0 4.168342891167374 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.4218 - 17 + 1 1.158 73111.3 1.0 9516 5585 15094 HBL1_DMSO_200M_050219_1,15103 HBL1_DMSO_200M_050219_1,15103, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15104 74.321 327.0 741820.0 25 0 167370.0 + -1 YPYSPPTF 8 97 970.9493059842932 1939.8840590353864 2 971.4500610232352 MULTI CID FTMS 0 0 0 15094 604951.25 0.7888629010423772 3 -0.3011474609375 10 ENSG00000107341|ENST00000263228|UBE2R2 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[{M(Oxidation (M))|F}T]PNP{I|L}[C(Carbamidomethyl (C))H] 16 -1 P{I|L}[C(Carbamidomethyl (C))H] + + 65.331 3.0205 0.59549 3.3678 3.3678 50.962 0.0 0.0 0.0 29.243814029231046 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 1.3996498648046138 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[{M(Oxidation (M))|F}T]PNP{I|L}[C(Carbamidomethyl (C))H] 3.3678 - 4786 1 1.158 159694.5 1.0 9517 5585 15094 HBL1_DMSO_200M_050219_1,15104 HBL1_DMSO_200M_050219_1,15104, False False YPYSPPTF 74.320896 971.450061023235 16982700.0 15094.0 ENSG00000107341|ENST00000263228|UBE2R2 8.123014291127523 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15105 74.323 77.0 927470.0 25 0 124350.0 + 1737 ALQENALAL 9 114 471.7667006884412 941.5188484436824 2 471.7658874392509 MULTI CID FTMS 0 0 0 15094 585143.5 1.0 0 0.0 11 Unmodified _ALQENALAL_ ENST00000524065.4_1_8:1626542-1636458:+|nuORF 39.957323273325 0.0756908302845263 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L}NA 6 5 29.978 0.0 0.0 3.1841 0.0 0.0 0.0 312.1943604888574 312.1943604888574 4.060897210547232 0.0 0.0 0.0 0 0.0 0.0 0.6643943297944485 0.5709991640913001 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L}NA 3.1841 - 461 1 1.158 61107.8 1.0 9518 5585 15094 HBL1_DMSO_200M_050219_1,15105 HBL1_DMSO_200M_050219_1,15105,ALQENALAL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15106 74.325 81.0 571380.0 25 0 85582.0 + -1 MSIKRMKKI 9 78 575.8429688153368 1149.6713846974735 2 575.8432494997978 MULTI CID FTMS 0 0 0 15094 533997.6875 0.1486711967032158 17 -1.311431884765625 12 Oxidation (M) _MSIKRM(Oxidation (M))KKI_ REV__chr5:151266913-151270150|23|11.57|0.39|4.89|+|0|TE_info:L1MC4a,L1MC4a_dup3311,L1,LINE,acceptor,+,151270150,151271608|GM2A,None|16 1.844237919475145 0.850302753031785 3 S 1 -1 6.9897 0.0 0.0 0.60797 0.0 0.0 623.4281728828236 436.1897982233032 1059.6179711061268 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.60797 + + 18 + 1 1.158 43017.2 1.0 9519 5585 15094 HBL1_DMSO_200M_050219_1,15106 HBL1_DMSO_200M_050219_1,15106,MSIKRMKKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15107 74.326 63.0 578930.0 25 0 30289.0 39820 VEVPDKVLPP 10 84 546.8195977130372 1091.6246424928745 2 547.3237182497978 MULTI CID FTMS 0 0 0 15094 558566.875 0.5016553880689691 3 -0.3011474609375 13 Unmodified _VEVPDKVLPP_ ENSG00000198948|ENST00000361618|MFAP3L;nc|ENSG00000198948|O75121-2|MFAP3L 3.5964929083625545 0.7100006075494749 3 N 1 10 10.713 0.0 0.0 0.98141 0.0 0.0 959.5708532856462 0.0 959.5708532856462 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.98141 - 52 + 1 1.158 36076.7 1.0 9520 5585 15094 HBL1_DMSO_200M_050219_1,15107 HBL1_DMSO_200M_050219_1,15107,VEVPDKVLPP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15108 74.327 49.0 1377300.0 25 0 149580.0 + 18323 KVLELMNKL 9 104 544.3310854579273 1086.6476179826543 2 544.3316528201103 MULTI CID FTMS 0 0 0 15094 502779.625 0.7272429929691933 -2 0.207733154296875 14 Unmodified _KVLELMNKL_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 43.9818466556824 0.0535980856389242 3 KV{I|L}E{I|L}M 6 3 52.484 0.0 0.0 4.8299 0.0 0.0 0.0 370.21006189517817 370.21006189517817 37.96632694842734 0.0 0.0 0.0 0 1.079689690656103 0.0 0.3807196863200844 0.0 + KV{I|L}E{I|L}M 4.8299 + + 177 + 1 1.158 57298.8 1.0 9521 5585 15094 HBL1_DMSO_200M_050219_1,15108 HBL1_DMSO_200M_050219_1,15108,KVLELMNKL True True KVLELMNKL 74.327365 544.33165282011 6977003.0 15094.0 nc|ENSG00000102900|Q8N1F7-2|NUP93;;ENSG00000102900|ENST00000308159|NUP93 3.0856803258260093 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15109 74.335 450.0 665640.0 25 0 132630.0 + 5327 DLFGVKGG 8 221 396.71689085460144 791.4192287760029 2 396.7162658572197 MULTI CID FTMS 0 0 0 15094 526848.6875 1.0 0 0.0 15 Unmodified _DLFGVKGG_ ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1 13.50788311687929 0.7113601687236069 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L}R 6 5 + 60.737 0.0 0.0 7.6744 7.6744 80.948 0.0 0.0 0.0 26.478174818886373 3.0102999566398125 3.0102999566398125 0.3258344212375164 0 0.3807196863200844 2.0 0.3252574989159953 0.7302046884880937 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L}R;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}ER;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}ER{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}ER;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}WV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}WV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[RE]|[WV]}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TA];{NN|[MP]|[D{I|L}]|[EV]}[KG]{[NV]|[RG]}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[MT]{I|L}EV 7.6744;7.6333;7.2941;6.9064;6.3762;5.9959;4.9715;3.6527;1.7079;0.49804 -;-;-;-;-;-;-;-;-;- 315 + 1 1.158 230721.1 1.0 9522 5585 15094 HBL1_DMSO_200M_050219_1,15109 HBL1_DMSO_200M_050219_1,15109,DLFGVKGG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15110 74.337 59.0 995440.0 25 0 88920.0 16481 KAKRGWIP 8 96 478.2972752297857 954.5799975263716 2 478.2977172732353 MULTI CID FTMS 0 0 0 15094 510304.5 0.4833533229063931 3 -0.3011474609375 16 Unmodified _KAKRGWIP_ ENSG00000158517|ENST00000289473|NCF1;ENST00000398421.6_1_7:74197704-74202433:+|nuORF;ENST00000423083.1_1_7:72644023-72649727:+|nuORF;ENST00000455062.2_1_7:74197704-74203407:+|nuORF;ENST00000486097.1_1_7:74197824-74199646:+|nuORF;nc|ENSG00000165178|A8MVU1|NCF1C;nc|ENSG00000290838|A6NI72|NCF1B 9.347437153973935 0.7675937258251505 3 [VS]VVTVV[RP] 9 8 + 42.33 0.0 0.0 4.4344 4.4344 77.672 0.0 0.0 0.0 4.634376702988767 4.634376702988767 4.634376702988767 4.634376702988767 0 0.5 2.0 0.9247425010840048 0.0 [VS]VVTVV[RP];[VS][{I|L}A]VT[VG]P{I|L};[VS][{I|L}A]VT{I|L}GPV;[VS]VVTV[{I|L}A][PA];[VS][{I|L}A]T[RV]P{I|L};[VS][{I|L}A]T[R{I|L}]PV;{[TV]|[{I|L}S]}A{I|L}TV[{I|L}A][PA];{[TV]|[{I|L}S]}[{I|L}A]TVV[RP];[{I|L}T]G{I|L}TV[{I|L}A][PA];[{I|L}T]{[VA]|[{I|L}G]}TVV[RP] 4.4344;3.9489;3.5712;3.2613;2.8804;2.1693;1.4308;1.3017;1.0278;0.89871 -;-;-;-;-;-;-;-;-;- 484 1 1.158 50612.8 1.0 9523 5585 15094 HBL1_DMSO_200M_050219_1,15110 HBL1_DMSO_200M_050219_1,15110,KAKRGWIP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15111 74.339 117.0 717710.0 25 0 99545.0 + 32582 SAVELPKI 8 88 428.7607059775943 855.5068590219886 2 428.7606994509697 MULTI CID FTMS 0 0 0 15094 496289.4375 0.2200025677856057 6 -0.5104522705078125 17 Unmodified _SAVELPKI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-4|BRCC3;nc|ENSG00000185515|P46736|BRCC3 26.88365393820708 0.4786498634179528 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{I|L}PK{I|L} 7 2 + 25.706 0.0 0.0 3.0047 3.0047 76.091 0.0 0.0 0.0 9.29731813806942 2.5450948893715264 2.5450948893715264 6.53212513775344 0 0.2742275032520141 0.0 0.4247425010840047 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{I|L}PK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{I|L}{I|L}[KP];[KP]{I|L}{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.0047;2.2412;0.028718 -;-;- 93 + 1 1.158 68264.9 1.0 9524 5585 15094 HBL1_DMSO_200M_050219_1,15111 HBL1_DMSO_200M_050219_1,15111,SAVELPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15112 74.346 390.0 512080.0 25 0 120260.0 -1 0 77 1132.8117749941398 3395.41349558262 3 1133.145678699017 MULTI CID FTMS 0 0 0 15094 484219.09375 0.6095261214112233 -2 0.207733154296875 18 3 D[RH]V{I|L}S 6 -1 18.263 0.0 0.0 0.53787 0.0 0.0 2147.752192823324 537.2324312799436 2684.9846241032674 0.0 0.0 0.0 0.0 0 0.0 0.0 1.524227503252014 0.0 D[RH]V{I|L}S 0.53787 - 470 + 1 1.158 164040.5 1.0 9525 5585 15094 HBL1_DMSO_200M_050219_1,15112 HBL1_DMSO_200M_050219_1,15112, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15113 74.35 207.0 728290.0 25 0 49380.0 + 31560 RQLESMIRL 9 142 382.5533941619233 1144.6383530859698 3 382.5533630251884 MULTI CID FTMS 0 0 0 15094 502250.09375 0.9633448896337348 -2 0.207733154296875 19 Unmodified _RQLESMIRL_ ENSG00000076003|ENST00000264156|MCM6 53.31671820480216 0.0330978755772958 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}ESM{I|L}{I|L}R 9 2 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L} + + 49.031 15.596 3.9262 4.2835 4.2835 53.343 0.0 0.0 0.0 0.0 33.00125777366541 0.0 0.0 0 1.3494850021680094 0.0 0.6989700043360187 0.3054621874040891 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}ESM{I|L}{I|L}R 4.2835 - 808 + 1 1.158 122399.6 1.0 9526 5585 15094 HBL1_DMSO_200M_050219_1,15113 HBL1_DMSO_200M_050219_1,15113,RQLESMIRL True True RQLESMIRL 74.350196 382.553363025188 4844304.5 15094.0 ENSG00000076003|ENST00000264156|MCM6 3.36352022488912 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15114 74.357 380.0 741900.0 25 0 82093.0 + 32208 RVVDYLTKL 9 199 553.8316687177116 1105.6487845022232 2 553.8308593630791 MULTI CID FTMS 0 0 0 15094 423231.625 0.0287747616469247 -4 0.374114990234375 20 Unmodified _RVVDYLTKL_ ENSG00000178425|ENST00000319550|NT5DC1;ENST00000417846.2_1_6:116432031-116439170:+|nuORF;nc|ENSG00000178425|Q5TFE4-2|NT5DC1 67.83816525789305 0.0219346420158844 3 {I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}TK{I|L} 9 3 + 73.438 0.0 0.0 6.642 6.642 92.438 0.0 0.0 0.0 9.645965151494948 57.22620585266512 9.645965151494948 17.939455175668755 0 1.6861818737241734 1.5228787452803376 0.8494850021680094 0.75 {I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}TK{I|L};[{I|L}A]{[RE]|[WV]}Y{I|L}TK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[QP][RH]TK{I|L};{I|L}{I|L}{[CA]|SS}[MT]{I|L}TK{I|L};[{I|L}T][VS][MT]{I|L}TK{I|L};{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}[MT]{I|L}TK{I|L};[KT]{I|L}[HM][HV]K{I|L};{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}V{I|L};[{I|L}T]K[HM][HV]K{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T[{I|L}A]S{I|L}YV{I|L} 6.642;5.0195;3.935;3.8048;3.0516;3.0508;2.3429;2.2391;1.8312;1.6644 -;-;-;-;-;-;-;-;-;- 2368 1 1.158 214108.3 1.0 9527 5585 15094 HBL1_DMSO_200M_050219_1,15114 HBL1_DMSO_200M_050219_1,15114,RVVDYLTKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15116 74.361 22.0 1513300.0 25 0 158820.0 + + 23139 SPLPQYVTV 9 69 502.27585584449577 1002.5371587557916 2 502.2769042849541 MULTI CID FTMS 0 0 0 15115 1099150.25 0.3661213043228802 1 -0.1255569458007812 1 Unmodified _LSPSPFGVTV_ ENSG00000163872|ENST00000305135|YEATS2 19.256988751693697 0.5244284437930726 3 {[TV]|[{I|L}S]}P[QP]YVTV 9 -1 {[TV]|[{I|L}S]}P[QP]YV + + 21.454 23.35 2.9767 2.1399 2.1399 48.961 0.0 0.0 0.0 0.0 -0.8438527343788884 -0.8438527343788884 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[TV]|[{I|L}S]}P[QP]YVTV 2.1399 - 91 + 1 1.158 32542.0 1.0 9528 5586 15115 HBL1_DMSO_200M_050219_1,15116 HBL1_DMSO_200M_050219_1,15116,LSPSPFGVTV False False SPLPQYVTV 74.361321 502.2768 76234914.0 15115.0 ENSG00000163872|ENST00000305135|YEATS2 5.175371487935384 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15117 74.363 67.0 895770.0 25 0 153770.0 + 24107 LYKGCGRRLR 10 71 611.3558712348582 1220.6971895365164 2 611.3559448122978 MULTI CID FTMS 0 0 0 15115 992418.1875 0.4824308681554795 1 -0.1255569458007812 2 Unmodified _LYKGCGRRLR_ REV__nc|ENSG00000138326|P62847-4|RPS24 1.6526216038709556 0.7189921496796233 3 Y 1 -1 11.594 0.0 0.0 0.94977 0.0 0.0 1039.6229688107337 0.0 1039.6229688107337 0.0 4.515449934959719 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.94977 + + 12 + 1 1.158 50698.4 1.0 9529 5586 15115 HBL1_DMSO_200M_050219_1,15117 HBL1_DMSO_200M_050219_1,15117,LYKGCGRRLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15118 74.364 23.0 2051400.0 25 0 205370.0 + 25511 NEMVYIPPD 9 64 539.2506991426651 1076.48684535213 2 539.2521240115166 MULTI CID FTMS 0 0 0 15115 1165925.625 1.0 0 0.0 3 Unmodified _NEMVYIPPD_ REV__ENSG00000188501|ENST00000695545|LCTL;REV__nc|ENSG00000188501|Q6UWM7-2|LCTL 10.823927491677226 0.5436922275383211 3 V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QD{I|L}E 7 -1 33.104 0.0 0.0 3.0751 0.0 0.0 0.0 195.0778444879516 195.0778444879516 12.134475811582632 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QD{I|L}E 3.0751 - 132 + 1 1.158 43699.3 1.0 9530 5586 15115 HBL1_DMSO_200M_050219_1,15118 HBL1_DMSO_200M_050219_1,15118,NEMVYIPPD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15119 74.365 35.0 1454800.0 25 0 234140.0 40214 VGRIWKMEL 9 76 566.3222542769303 1130.6299556206604 2 566.3223754763603 MULTI CID FTMS 0 0 0 15115 861789.1875 0.1742716363286705 -4 0.32000732421875 4 Unmodified _VGRIWKMEL_ ENSG00000133401|ENST00000438447|PDZD2;ENST00000502489.5_1_5:31983264-32077762:+|nuORF;nc|ENSG00000133401|O15018-2|PDZD2 2.059750862983233 0.8427793054688888 3 K 1 8 1.9897 0.0 0.0 0.17598 0.0 0.0 432.25918032944793 567.2545260065061 999.513706335954 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.17598 + + 6 + 1 1.158 45497.6 1.0 9531 5586 15115 HBL1_DMSO_200M_050219_1,15119 HBL1_DMSO_200M_050219_1,15119,VGRIWKMEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15120 74.367 63.0 1503100.0 25 0 105200.0 + 17276 KLPSNLPQL 9 108 505.3052065725149 1008.59586021183 2 505.3075439333916 MULTI CID FTMS 0 0 0 15115 681083.625 0.4589167491795596 1 -0.1255569458007812 5 Unmodified _KLPSNLPQL_ ENSG00000198301|ENST00000356260|SDAD1;ENST00000504975.1_1_4:76911880-76912009:-|nuORF 53.832793166522166 0.0319663582346103 3 [QP][VS]K{I|L}PQ{I|L} 9 4 + 63.891 0.0 0.0 6.3347 6.3347 82.743 0.0 0.0 0.0 3.521825181113627 10.884767769392738 3.521825181113627 3.521825181113627 0 1.048455006504028 0.9208187539523752 0.6307196863200843 1.174742501084005 [QP][VS]K{I|L}PQ{I|L};{[TV]|[{I|L}S]}[NP]K{I|L}PQ{I|L};[{I|L}P][NS]K{I|L}PQ{I|L};[QP][VS]{I|L}KPQ{I|L};{[QN]|[E{I|L}]|[KN]}P{[TV]|[{I|L}S]}{I|L}PQ{I|L};{[TV]|[{I|L}S]}[NP]{I|L}KPQ{I|L};[{I|L}P][NS]{I|L}KPQ{I|L};[VP]{[QS]|[NT]}K{I|L}PQ{I|L};{[QN]|[E{I|L}]|[KN]}P[KG]KPQ{I|L};[K{I|L}]D[PA]KPQ{I|L} 6.3347;5.9855;5.7377;5.6997;5.4109;5.3505;5.1028;4.8357;4.7759;4.363 -;-;-;-;-;-;-;-;-;- 783 1 1.158 74731.5 1.0 9532 5586 15115 HBL1_DMSO_200M_050219_1,15120 HBL1_DMSO_200M_050219_1,15120,KLPSNLPQL True True KLPSNLPQL 74.366829 505.307543933392 26686036.0 15115.0 ENSG00000198301|ENST00000356260|SDAD1;;ENST00000504975.1_1_4:76911880-76912009:-|nuORF 4.670591990152995 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15121 74.373 349.0 709010.0 25 0 113690.0 + -1 LPPLGSTI 8 139 796.7801207743984 1591.5456886155966 2 797.2832519412041 MULTI CID FTMS 0 0 0 15115 570118.4375 0.9605113871188696 -1 0.05755615234375 6 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))EC(Carbamidomethyl (C))C(Carbamidomethyl (C))NNIRC(Carbamidomethyl (C))F_ nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1;ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1 1.1933415558491238 0.8695176722560516 3 [{I|L}P]P{I|L}GST{I|L} 8 -1 56.38 0.0 0.0 3.5425 0.0 0.0 0.0 810.0642070234422 810.0642070234422 11.828890979844218 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.1421590589602533 0.0 [{I|L}P]P{I|L}GST{I|L} 3.5425 - 465 1 1.158 172223.0 1.0 9533 5586 15115 HBL1_DMSO_200M_050219_1,15121 HBL1_DMSO_200M_050219_1,15121,CCECCNNIRCF False False LPPLGSTI 74.373161 796.7822 6357043.0 15115.0 nc|ENSG00000139697|A3KN83-3|SBNO1;;nc|ENSG00000139697|A3KN83-4|SBNO1;;ENSG00000139697|ENST00000602398|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1 2.5870229403177896 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15122 74.375 82.0 910260.0 25 0 123490.0 28085 PPILELGLTF 10 96 550.3217983615174 1098.629043789835 2 550.3232299685478 MULTI CID FTMS 0 0 0 15115 511411.6875 0.1230348835258095 9 -0.8155364990234375 7 Unmodified _PPILELGLTF_ ENST00000481948.1_1_16:88104968-88110264:+|nuORF 24.020572477871973 0.4289996903560794 3 {[VA]|[{I|L}G]}{I|L}T{M(Oxidation (M))|F} 5 5 40.445 0.0 0.0 3.6814 0.0 0.0 0.0 564.3020106710552 564.3020106710552 11.04273882327016 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 + {[VA]|[{I|L}G]}{I|L}T{M(Oxidation (M))|F} 3.6814 + + 443 1 1.158 62472.2 1.0 9534 5586 15115 HBL1_DMSO_200M_050219_1,15122 HBL1_DMSO_200M_050219_1,15122,PPILELGLTF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15123 74.382 390.0 533100.0 25 0 53287.0 + 31989 RVFTEANLVSV 11 128 617.8432897932076 1233.6720266532152 2 617.8434326052666 MULTI CID FTMS 0 0 0 15115 400147.46875 0.4106181810392277 -1 0.05755615234375 8 Unmodified _RVFTEANLVSV_ ENSG00000112159|ENST00000369393|MDN1 66.61675797227278 0.0422914471598608 3 [RV]{M(Oxidation (M))|F}TEAN{I|L}VSV 11 0 + 94.144 0.0 0.0 7.6312 7.6312 89.269 0.0 0.0 0.0 5.862435673934286 66.69647663209841 5.862435673934286 6.259015767548988 0 1.305462187404089 0.0 1.079689690656103 1.3539171939081172 + + [RV]{M(Oxidation (M))|F}TEAN{I|L}VSV;[VS]{I|L}[W{M(Oxidation (M))|F}]AN{I|L}VSV;[RV]{M(Oxidation (M))|F}TEAGG{I|L}VSV;[{I|L}V]S[W{M(Oxidation (M))|F}]AN{I|L}VSV;[VS]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VSV;[VS][RD][{M(Oxidation (M))|F}V]N{I|L}VSV;[{I|L}V][YQ]EARAVSV;[RV]{M(Oxidation (M))|F}TEA[VG]AVSV;[VS]{I|L}[W{M(Oxidation (M))|F}]AGG{I|L}VSV;[{I|L}V]NM[{M(Oxidation (M))|F}V]N{I|L}VSV 7.6312;7.1238;6.8912;6.3845;5.9085;5.9085;5.7534;5.6329;5.4477;5.4262 +;-;-;-;-;-;-;-;-;- + 1339 1 1.158 154148.6 1.0 9535 5586 15115 HBL1_DMSO_200M_050219_1,15123 HBL1_DMSO_200M_050219_1,15123,RVFTEANLVSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15124 74.39 476.0 697300.0 25 0 61441.0 29224 QGQVLTMCP 9 238 488.73299915008187 975.4514453669638 2 488.7333862185478 MULTI CID FTMS 0 0 0 15115 361484.9375 0.7603641565124439 -1 0.05755615234375 9 Unmodified _QGQVLTMCP_ CON__A2AB72 26.88365393820708 0.1891292719743517 3 [DP]TV{I|L}P 6 6 20.142 0.0 0.0 2.0649 0.0 0.0 0.0 350.0847559877691 350.0847559877691 1.6535062671498402 0.0 0.0 0.0 0 0.2887254899964357 0.1135092748275181 0.0 0.0 [DP]TV{I|L}P 2.0649 - 1385 + 1 1.158 247185.3 1.0 9536 5586 15115 HBL1_DMSO_200M_050219_1,15124 HBL1_DMSO_200M_050219_1,15124,QGQVLTMCP False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 15125 74.394 153.0 641080.0 25 0 126630.0 10303 FSALTRKKML 10 102 597.8561389632442 1193.6977249932884 2 597.8565551638603 MULTI CID FTMS 0 0 0 15115 352294.1875 0.1333569746507791 -6 0.5084915161132812 10 Unmodified _FSALTRKKML_ ENST00000443317.1_1_20:32802260-32803361:-|nuORF 1.6526216038709556 0.7189921496796233 3 {M(Oxidation (M))|F} 1 9 9.9148 0.0 0.0 0.8306 0.0 0.0 1028.6187893016852 0.0 1028.6187893016852 0.0 7.150623460217194 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.8306 + + 21 + 1 1.158 79718.4 1.0 9537 5586 15115 HBL1_DMSO_200M_050219_1,15125 HBL1_DMSO_200M_050219_1,15125,FSALTRKKML False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15126 74.403 546.0 767160.0 25 0 118120.0 + 21550 LPKAALLV 8 236 412.7839829502703 823.5534129673406 2 412.7836181521416 MULTI CID FTMS 0 0 0 15115 344135.125 0.0380073339709578 -8 0.6753768920898438 11 Unmodified _LPKAALLV_ ENSG00000022556|ENST00000448584|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;nc|ENSG00000022556|Q9NX02-2|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2 42.09456458481378 0.1992492688217789 3 [{I|L}P]KAA{I|L}{I|L}V 8 0 + 41.121 0.0 0.0 4.9931 4.9931 85.3 0.0 0.0 0.0 12.12667314322836 11.344533181638106 11.344533181638106 10.0 0 1.0356668758921828 1.2218487496163564 0.0 0.0 + + [{I|L}P]KAA{I|L}{I|L}V;[{I|L}P]KA{I|L}A{I|L}V;[{I|L}P]K{I|L}AA{I|L}V;[KP]{I|L}AA{I|L}{I|L}V;[{I|L}A][KP]A{I|L}{I|L}V;[{I|L}A][KA]P{I|L}{I|L}V;[{I|L}A][{I|L}A]KP{I|L}V;{I|L}{I|L}AAKP{I|L}V;[{I|L}A][KA]{I|L}P{I|L}V;[KP]{I|L}A{I|L}A{I|L}V 4.9931;3.7788;3.5908;3.3325;3.0527;2.9822;2.499;2.4177;2.2512;2.1182 +;-;-;-;-;-;-;-;-;- + 494 1 1.158 320755.5 1.0 9538 5586 15115 HBL1_DMSO_200M_050219_1,15126 HBL1_DMSO_200M_050219_1,15126,LPKAALLV False True LPKAALLV 74.4031 412.783618152142 78131400.0 15115.0 nc|ENSG00000022556|Q9NX02-4|NLRP2;;nc|ENSG00000022556|Q9NX02-3|NLRP2;;nc|ENSG00000022556|Q9NX02-2|NLRP2;;nc|ENSG00000022556|Q9NX02-5|NLRP2;;ENSG00000022556|ENST00000448584|NLRP2;;ENST00000540597.5_1_19:55476735-55501561:+|nuORF 3.573225816090902 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15127 74.412 516.0 248810.0 25 0 63306.0 -1 0 52 1162.797886063532 3485.371828790796 3 1163.463305652142 MULTI CID FTMS 0 0 0 15115 310816.71875 0.0026701947889089 27 -2.10736083984375 12 3 E 1 -1 6.9897 0.0 0.0 0.20054 0.0 0.0 2829.143556630322 524.1635693476292 3353.307125977952 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20054 - 11 + 1 1.158 109249.3 1.0 9539 5586 15115 HBL1_DMSO_200M_050219_1,15127 HBL1_DMSO_200M_050219_1,15127, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15128 74.42 452.0 520650.0 25 0 116190.0 + -1 MMYMLHQHFCM 11 141 788.7970778262481 1575.5796027192962 2 789.2986328005791 MULTI CID FTMS 0 0 0 15115 302445.9375 0.6106783577791363 -1 0.05755615234375 13 Carbamidomethyl (C),3 Oxidation (M) _M(Oxidation (M))M(Oxidation (M))YMLHQHFC(Carbamidomethyl (C))M(Oxidation (M))_ REV__ENSG00000105865|ENST00000265720|DUS4L;REV__ENST00000485825.1_1_7:107215546-107218002:+|nuORF;REV__nc|ENSG00000288558|O95620-2|DUS4L 0.3506318815782774 0.8734936314171269 3 YYYNTVSG 8 -1 50.597 0.0 0.0 3.2113 0.0 0.0 0.0 625.1549166315061 625.1549166315061 16.77948461635836 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.7059771852360797 0.0 YYYNTVSG 3.2113 - 3838 + 1 1.158 159416.5 1.0 9540 5586 15115 HBL1_DMSO_200M_050219_1,15128 HBL1_DMSO_200M_050219_1,15128,MMYMLHQHFCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15129 74.429 490.0 405880.0 25 0 17822.0 -1 IDAEMDSTPV 10 203 547.2371360848055 1092.4597192364108 2 547.2395507693291 MULTI CID FTMS 0 0 0 15115 272957.46875 1.0 0 0.0 14 Oxidation (M) _IDAEM(Oxidation (M))DSTPV_ ENSG00000160062|ENST00000373510|ZBTB8A;nc|ENSG00000160062|Q96BR9-2|ZBTB8A 10.823927491677226 0.6659270209832991 3 [TP]{I|L}{I|L}NEC(Carbamidomethyl (C))C(Carbamidomethyl (C))S 9 -1 + 14.001 0.0 0.0 1.2816 1.2816 67.389 0.0 0.0 0.0 0.1926238734493264 0.8478159846238107 0.1926238734493264 1.3278623087155843 0 0.0 0.8860566476931632 0.0 0.0 [TP]{I|L}{I|L}NEC(Carbamidomethyl (C))C(Carbamidomethyl (C))S;[{I|L}T]{I|L}PNEC(Carbamidomethyl (C))C(Carbamidomethyl (C))S;[{I|L}P][{I|L}T]NEC(Carbamidomethyl (C))C(Carbamidomethyl (C))S;[TP]K{[{M(Oxidation (M))|F}H]|[RQ]}GC(Carbamidomethyl (C))C(Carbamidomethyl (C))S;{[TV]|[{I|L}S]}P[Q{I|L}]EC(Carbamidomethyl (C))C(Carbamidomethyl (C))S;[EP]{[DS]|[MA]|[CV]|TT}[WY]PTV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}D[QA]D[RN];[{I|L}T]{I|L}P{[DA]|[EG]}GC(Carbamidomethyl (C))C(Carbamidomethyl (C))S;[EP]{[DS]|[MA]|[CV]|TT}[WY]PS{I|L};[EP]RREC(Carbamidomethyl (C))C(Carbamidomethyl (C))S 1.2816;1.16;1.107;1.0673;1.0528;0.85511;0.78282;0.65398;0.63264;0.56154 -;-;-;-;-;-;-;-;-;- 2452 1 1.158 154060.0 1.0 9541 5586 15115 HBL1_DMSO_200M_050219_1,15129 HBL1_DMSO_200M_050219_1,15129,IDAEMDSTPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15130 74.439 490.0 411750.0 25 0 25594.0 39955 VGAIEPQFYE 10 210 576.7836021043721 0 576.7830078005791 PEAK CID FTMS 0 0 0 15115 238302.546875 1.0 0 0.0 15 Unmodified _VGAIEPQFYE_ ENSG00000242110|ENST00000335606|AMACR;ENST00000506639.5_1_5:33994220-34005893:-|nuORF;nc|ENSG00000242110|Q9UHK6-5|AMACR 10.073929032068715 0.3742530088597855 3 {I|L} 1 9 3.4949 0.0 0.0 0.30349 0.0 0.0 426.1081858133585 609.3368624322874 1035.445048245646 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.30349 + + 33 + 1 1.158 149671.9 1.0 9542 5586 15115 HBL1_DMSO_200M_050219_1,15130 HBL1_DMSO_200M_050219_1,15130,VGAIEPQFYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15131 74.441 107.0 499130.0 25 0 63470.0 + -1 DALLEQAMI 9 86 510.2581661834756 1018.5017794337512 2 510.2579528689384 MULTI CID FTMS 0 0 0 15115 250940.859375 0.7831903940594585 1 -0.1255569458007812 16 Oxidation (M) _DALLEQAM(Oxidation (M))I_ nc|ENSG00000008838|O75448-2|MED24;ENSG00000008838|ENST00000394128|MED24;ENST00000581054.1_1_17:38192365-38210656:-|nuORF 23.1484247019978 0.2366544122328345 3 {[DA]|[EG]}{I|L}A 4 -1 22.703 0.0 0.0 2.2291 0.0 0.0 0.0 645.2936550043167 645.2936550043167 9.93882771791494 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[DA]|[EG]}{I|L}A 2.2291 - 147 1 1.158 47724.1 1.0 9543 5586 15115 HBL1_DMSO_200M_050219_1,15131 HBL1_DMSO_200M_050219_1,15131,DALLEQAMI False False DALLEQAMI 74.441044 510.257952868938 3166463.25 15115.0 nc|ENSG00000008838|O75448-2|MED24;;ENSG00000008838|ENST00000394128|MED24;;ENST00000581054.1_1_17:38192365-38210656:-|nuORF 2.040259679158529 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15132 74.455 800.0 843730.0 25 0 79176.0 + 40742 VLIKEFRVV 9 317 368.2379422273551 1101.6919972822652 3 368.2378112673759 MULTI CID FTMS 0 0 0 15115 161712.1875 0.9748287128187832 1 -0.1255569458007812 17 Unmodified _VLIKEFRVV_ ENSG00000180957|ENST00000335272|PITPNB;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;ENST00000471825.1_1_22:28306950-28315179:-|nuORF;nc|ENSG00000180957|P48739-2|PITPNB 20.580933911654288 0.2795815587326093 3 V{I|L}{I|L}KE{M(Oxidation (M))|F}{I|L}K{I|L} 9 3 + 85.015 0.0 0.0 7.7167 7.7167 86.194 0.0 0.0 0.0 29.488474775526186 3.309932190414244 3.309932190414244 3.309932190414244 0 0.1505149978319906 1.3010299956639813 0.3054621874040891 0.7302046884880937 V{I|L}{I|L}KE{M(Oxidation (M))|F}{I|L}K{I|L};V{I|L}{I|L}KE{M(Oxidation (M))|F}{I|L}{I|L}K;V{I|L}{I|L}V{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}K{I|L};V{I|L}{I|L}V{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}{I|L}K;V{I|L}{I|L}V[RD]{M(Oxidation (M))|F}K{I|L};V{I|L}{I|L}V[RD]{M(Oxidation (M))|F}{I|L}K;VV[RV]E{M(Oxidation (M))|F}{I|L}K{I|L};VV[RV]E{M(Oxidation (M))|F}{I|L}{I|L}K;V{I|L}{I|L}KE[R{M(Oxidation (M))|F}]VV;V{I|L}{I|L}KV[W{M(Oxidation (M))|F}]VV 7.7167;7.4163;6.0455;5.7451;5.0195;4.7191;4.1963;3.8959;3.6528;3.1023 -;-;-;-;-;-;-;-;+;- + 634 + 1 1.158 527198.3 0.7900000214576721 9544 5586 15115 HBL1_DMSO_200M_050219_1,15132 HBL1_DMSO_200M_050219_1,15132,VLIKEFRVV False True VLIKEFRVV 74.454858 368.237811267376 2164628.5 15115.0 ENSG00000180957|ENST00000335272|PITPNB;;nc|ENSG00000180957|P48739-2|PITPNB;;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;;ENST00000471825.1_1_22:28306950-28315179:-|nuORF 4.25044059753418 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15133 74.467 718.0 316430.0 25 0 24970.0 + -1 VPYLVGQV 8 120 874.5044616455057 0 874.4907104372978 PEAK CID FTMS 0 0 0 -1 0 18 ENST00000494399.5_1_1:45478966-45479784:+|nuORF;ENSG00000126088|ENST00000246337|UROD 3 VQGVV{I|L}N 7 -1 36.899 0.0 0.0 2.1121 0.0 0.0 891.509886570505 143.04633508853752 1034.5562216590426 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 VQGVV{I|L}N 2.1121 - 1528 + 1 1.158 155220.8 1.0 9545 5586 15115 HBL1_DMSO_200M_050219_1,15133 HBL1_DMSO_200M_050219_1,15133, False False VPYLVGQV 74.467352 874.490710437298 2416339.75 15115.0 ENST00000494399.5_1_1:45478966-45479784:+|nuORF;;ENSG00000126088|ENST00000246337|UROD 6.801751613616943 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15134 74.481 715.0 200190.0 25 0 40647.0 + -1 RECECMCLCMC 11 132 804.7651138756017 0 804.7662231326103 PEAK CID FTMS 0 0 0 15115 145792.328125 0.4214006963196404 -1 0.05755615234375 19 5 Carbamidomethyl (C) _REC(Carbamidomethyl (C))EC(Carbamidomethyl (C))MC(Carbamidomethyl (C))LC(Carbamidomethyl (C))MC(Carbamidomethyl (C))_ REV__ENST00000278426.7_2_11:57252034-57252334:-|nuORF 0.0 0.4761840153648598 3 YNGVDG 6 -1 37.689 0.0 0.0 2.3445 0.0 0.0 344.13441196093214 655.1149996393186 999.2494116002508 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 1.579689690656103 0.3807196863200844 YNGVDG 2.3445 - 387 + 1 1.158 103592.1 1.0 9546 5586 15115 HBL1_DMSO_200M_050219_1,15134 HBL1_DMSO_200M_050219_1,15134,RECECMCLCMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15135 74.483 69.0 496200.0 25 0 75988.0 19644 LGGAEVFLL 9 76 459.768410651318 917.522268369436 2 459.7687255740166 MULTI CID FTMS 0 0 0 15115 140921.5 0.3854261930166861 1 -0.1255569458007812 20 Unmodified _LGGAEVFLL_ ENSG00000181961|ENST00000314721|OR4A16 24.67388899826682 0.2172451872415813 3 {I|L}{I|L} 2 7 20.969 0.0 0.0 2.2854 0.0 0.0 673.3404408185562 0.0 673.3404408185562 0.0 5.105450102066126 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}{I|L} 2.2854 + + 45 1 1.158 31329.3 1.0 9547 5586 15115 HBL1_DMSO_200M_050219_1,15135 HBL1_DMSO_200M_050219_1,15135,LGGAEVFLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15137 74.487 13.0 5982300.0 25 0 1012900.0 20316 LLESKDLLL 9 61 348.5503130886796 1042.6291098662389 3 348.5500976443291 MULTI CID FTMS 0 0 0 15136 3801951.75 0.4929383289632365 2 -0.1451263427734375 1 Unmodified _LLESKDLLL_ ENST00000395246.5_1_5:130727872-130728007:+|nuORF 13.614867670302877 0.4681447649821485 3 {I|L}{I|L}P 3 7 26.198 0.0 0.0 2.5127 0.0 0.0 0.0 716.3856560454861 716.3856560454861 15.228787452803374 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}P 2.5127 - 32 + 1 1.164 69073.4 1.0 9548 5587 15136 HBL1_DMSO_200M_050219_1,15137 HBL1_DMSO_200M_050219_1,15137,LLESKDLLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15138 74.488 56.0 969520.0 25 0 118350.0 + 15473 IPRVPSLSV 9 80 484.3004739097296 966.5863948862592 2 484.3011352419853 MULTI CID FTMS 0 0 0 15136 819785.9375 0.5713144840340805 2 -0.1451263427734375 2 Unmodified _IPRVPSLSV_ ENSG00000152464|ENST00000378197|RPP38 53.832793166522166 0.0319663582346103 3 [{I|L}P]RVSP{I|L}SV 9 2 + 65.285 0.0 0.0 6.7542 6.7542 84.758 0.0 0.0 0.0 11.492759257164408 38.62073106632563 11.492759257164408 4.203103093438962 0 0.8807196863200843 0.8860566476931632 0.805462187404089 0.0 [{I|L}P]RVSP{I|L}SV;[{I|L}P]RVSPS{I|L}V;[{I|L}P]RV[VG]{I|L}DV;[{I|L}P]RV[VG]D{I|L}V 6.7542;6.3194;4.2983;4.0693 -;-;-;- 198 1 1.164 46784.4 1.0 9549 5587 15136 HBL1_DMSO_200M_050219_1,15138 HBL1_DMSO_200M_050219_1,15138,IPRVPSLSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15139 74.489 42.0 1918400.0 25 0 300610.0 + 24709 MPALAPPEV 9 90 462.74665165214685 923.4787503710936 2 462.7466308474541 MULTI CID FTMS 0 0 0 15136 1202567.375 0.6364782706120904 -2 0.1831130981445312 3 Unmodified _MPALAPPEV_ ENSG00000132341|ENST00000543796|RAN;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 24.67388899826682 0.2172451872415813 3 AA{I|L}PMP 6 6 29.9 0.0 0.0 3.2378 0.0 0.0 0.0 340.14985420153283 340.14985420153283 15.176283969283345 0.0 0.0 0.0 0 0.6747425010840047 0.9208187539523752 0.0 0.0 AA{I|L}PMP 3.2378 - 237 1 1.164 65292.4 1.0 9550 5587 15136 HBL1_DMSO_200M_050219_1,15139 HBL1_DMSO_200M_050219_1,15139,MPALAPPEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15140 74.492 108.0 982340.0 25 0 116820.0 -1 0 105 368.71587828822254 735.4172036432451 2 368.7155029177666 MULTI CID FTMS 0 0 0 15136 759542.5 0.379204623491348 -3 0.2541275024414062 4 3 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}{I|L}K 6 -1 + 31.759 0.0 0.0 4.3185 4.3185 70.513 0.0 0.0 0.0 6.478174818886373 0.2876832293562614 0.2876832293562614 0.2876832293562614 0 0.0 0.0 0.0 0.4134117563873403 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}{I|L}K;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}K{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}{I|L}K;{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}K{I|L} 4.3185;4.2793;3.1693;3.1302 -;-;-;- 75 + 1 1.164 89618.7 1.0 9551 5587 15136 HBL1_DMSO_200M_050219_1,15140 HBL1_DMSO_200M_050219_1,15140, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15141 74.494 112.0 425070.0 25 0 85974.0 + 45926 YYYDGDIGNYY 11 83 703.2827151770417 1404.5508774208834 2 703.2827026247978 MULTI CID FTMS 0 0 0 15136 684043.375 0.0660634198554732 -3 0.2541275024414062 5 Unmodified _YYYDGDIGNYY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 14.838274106304384 0.7264935675211688 3 YYD 3 8 22.932 0.0 0.0 1.6327 0.0 0.0 0.0 960.3760476691832 960.3760476691832 6.478174818886373 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + YYD 1.6327 + + 231 1 1.164 43956.9 1.0 9552 5587 15136 HBL1_DMSO_200M_050219_1,15141 HBL1_DMSO_200M_050219_1,15141,YYYDGDIGNYY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15142 74.497 120.0 451160.0 25 0 46478.0 + 45941 YYYDPTTGLY 10 93 628.2792256918286 1254.5438984504572 2 628.2802001833916 MULTI CID FTMS 0 0 0 15136 602771.1875 0.727805541179562 -1 0.1255569458007812 6 Unmodified _YYYDPTTGLY_ ENSG00000003756|ENST00000347869|RBM5;ENST00000489437.1_1_3:50144918-50148299:+|nuORF 20.453626601364224 0.5043500229302764 3 YYDY 4 6 29.157 0.0 0.0 2.3241 0.0 0.0 0.0 647.3033338354759 647.3033338354759 9.208187539523747 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 YYDY 2.3241 - 112 1 1.164 50770.0 1.0 9553 5587 15136 HBL1_DMSO_200M_050219_1,15142 HBL1_DMSO_200M_050219_1,15142,YYYDPTTGLY False True YYYDPTTGLY 74.496643 628.280200183392 7138835.5 15136.0 ENSG00000003756|ENST00000347869|RBM5;;ENST00000489437.1_1_3:50144918-50148299:+|nuORF 4.8181436856587725 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15143 74.498 38.0 688030.0 25 0 60328.0 + 9122 FFPEYTHQL 9 59 591.285389870177 1180.556226807154 2 591.2856323122978 MULTI CID FTMS 0 0 0 15136 603059.8125 0.8115408537239244 -2 0.1831130981445312 7 Unmodified _FFPEYTHQL_ ENSG00000128708|ENST00000264108|HAT1 8.745405648335112 0.6093864874670651 3 EP[{M(Oxidation (M))|F}E] 4 7 11.427 0.0 0.0 0.96791 0.0 0.0 660.3210316388687 0.0 660.3210316388687 0.0 4.436974992327123 0.0 0.0 0 0.0 0.0 0.0 0.0 EP[{M(Oxidation (M))|F}E] 0.96791 - 24 1 1.164 23920.1 1.0 9554 5587 15136 HBL1_DMSO_200M_050219_1,15143 HBL1_DMSO_200M_050219_1,15143,FFPEYTHQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15144 74.503 300.0 496210.0 25 0 54743.0 -1 0 130 691.3235183250995 2070.9487255754984 3 691.6592285037041 MULTI CID FTMS 0 0 0 15136 604075.75 0.7043709540551784 -2 0.1831130981445312 8 3 {[QN]|[E{I|L}]|[KN]}NYQ{[NV]|[RG]}[NS]YNEN 13 -1 41.762 0.0 0.0 2.0165 0.0 0.0 0.0 486.201508128486 486.201508128486 12.913142047224207 0.0 0.0 0.0 0 0.8252574989159953 1.154901959985743 0.1421590589602531 0.7742275032520141 {[QN]|[E{I|L}]|[KN]}NYQ{[NV]|[RG]}[NS]YNEN 2.0165 - 2120 1 1.164 121533.7 1.0 9555 5587 15136 HBL1_DMSO_200M_050219_1,15144 HBL1_DMSO_200M_050219_1,15144, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15145 74.506 143.0 822580.0 25 0 59863.0 + 11802 GLMGAGIAQV 10 134 458.7494672821346 915.4843816310693 2 458.7496215701103 MULTI CID FTMS 0 0 0 15136 486717.34375 0.4339974493415536 -1 0.1255569458007812 9 Unmodified _GLMGAGIAQV_ ENSG00000084754|ENST00000380649|HADHA;ENSG00000138796|ENST00000309522|HADH;nc|ENSG00000138796|Q16836-2|HADH;nc|ENSG00000138796|Q16836-3|HADH 53.57557251787612 0.059165173252085 3 {[VA]|[{I|L}G]}GAAMV 7 4 36.955 0.0 0.0 4.0367 0.0 0.0 0.0 313.1497618403068 313.1497618403068 15.214847577223054 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[VA]|[{I|L}G]}GAAMV 4.0367 - 1033 1 1.164 91348.1 1.0 9556 5587 15136 HBL1_DMSO_200M_050219_1,15145 HBL1_DMSO_200M_050219_1,15145,GLMGAGIAQV True True GLMGAGIAQV 74.506189 458.74962157011 7329698.0 15136.0 nc|ENSG00000138796|Q16836-3|HADH;;ENSG00000084754|ENST00000380649|HADHA;;nc|ENSG00000138796|Q16836-2|HADH;;ENSG00000138796|ENST00000309522|HADH 4.385423024495442 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15146 74.51 206.0 727900.0 25 0 88400.0 + -1 VDQHLGLCMSL 11 113 430.2059558312661 1287.5960380939985 3 430.2060119509697 MULTI CID FTMS 0 0 0 15136 450480.34375 1.0 0 0.0 10 Carbamidomethyl (C),Oxidation (M) _VDQHLGLC(Carbamidomethyl (C))M(Oxidation (M))SL_ REV__ENST00000519724.1_1_8:71157374-71157476:-|nuORF 9.243775137331635 0.8315352019864206 3 APTGHS{I|L} 7 -1 30.829 0.0 0.0 2.3943 0.0 0.0 606.2512346225286 0.0 606.2512346225286 0.0 16.714786507178303 0.0 0.0 0 0.3807196863200844 0.0 1.4940840204505517 0.0 APTGHS{I|L} 2.3943 - 269 + 1 1.164 129714.3 1.0 9557 5587 15136 HBL1_DMSO_200M_050219_1,15146 HBL1_DMSO_200M_050219_1,15146,VDQHLGLCMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15147 74.513 131.0 505090.0 25 0 43490.0 + 15844 ISLWSTIYN 9 111 548.7889534405001 1095.5633539478 2 548.7894775271416 MULTI CID FTMS 0 0 0 15136 439548.21875 0.6410932229787017 -2 0.1831130981445312 11 Unmodified _ISLWSTIYN_ REV__ENSG00000152348|ENST00000282185|ATG10 15.847184025352805 0.4077185912009129 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L} 3 -1 24.314 0.0 0.0 2.2193 0.0 0.0 0.0 704.3290499322874 704.3290499322874 2.5645301331376444 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 0.0 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L} 2.2193 - 677 + 1 1.164 55876.9 1.0 9558 5587 15136 HBL1_DMSO_200M_050219_1,15147 HBL1_DMSO_200M_050219_1,15147,ISLWSTIYN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15148 74.52 387.0 783650.0 25 0 180390.0 45885 YYRKCDMADD 10 197 640.2563329253045 0 640.4006835818291 PEAK CID FTMS 0 0 0 15136 34754.34375 0.9397400469029686 -1 0.1255569458007812 12 Unmodified _YYRKCDMADD_ ENSG00000147234|ENST00000683843|FRMPD3 3.944395688203298 0.3961065659209837 3 YES 3 9 5.3145 0.0 0.0 0.41568 0.0 0.0 800.2559548749365 96.0824984186156 896.3384532935521 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4423877696554315 0.0 YES 0.41568 - 161 + 1 1.164 220784.1 1.0 9559 5587 15136 HBL1_DMSO_200M_050219_1,15148 HBL1_DMSO_200M_050219_1,15148,YYRKCDMADD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15149 74.527 419.0 176680.0 25 0 43536.0 -1 YYYESRCCRNT 11 100 786.3202463613035 1570.6259397894069 2 786.3200561404228 MULTI CID FTMS 0 0 0 15136 288441.5 1.0 0 0.0 13 2 Carbamidomethyl (C) _YYYESRC(Carbamidomethyl (C))C(Carbamidomethyl (C))RNT_ ENSG00000155890|ENST00000286349|TRIM42;nc|ENSG00000155890|Q8IWZ5-2|TRIM42 1.4819007175156935 0.86815623132643 3 YYNG{[QS]|[NT]}YGNY 10 -1 35.996 0.0 0.0 2.2918 0.0 0.0 0.0 358.1420596208736 358.1420596208736 19.54251328923327 0.0 0.0 0.0 0 0.0 2.0 0.7302046884880937 0.7302046884880937 YYNG{[QS]|[NT]}YGNY 2.2918 - 398 1 1.164 57552.4 1.0 9560 5587 15136 HBL1_DMSO_200M_050219_1,15149 HBL1_DMSO_200M_050219_1,15149,YYYESRCCRNT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15150 74.531 206.0 379110.0 25 0 44284.0 + 17826 KQLDDLKVEL 10 116 400.8994160702367 1199.67641881091 3 400.8993713259697 MULTI CID FTMS 0 0 0 15136 274786.34375 0.0013295940131135 43 -3.1081314086914062 14 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 32.61649475675321 0.2358628368497494 3 [KQ]{I|L}DD{I|L}S{I|L}R{I|L} 10 3 [KQ]{I|L}DD + + 27.779 13.345 2.2268 2.3156 2.3156 49.141 0.0 0.0 0.0 0.0 14.434341081910343 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 [KQ]{I|L}DD{I|L}S{I|L}R{I|L} 2.3156 - 189 + 1 1.164 64582.9 1.0 9561 5587 15136 HBL1_DMSO_200M_050219_1,15150 HBL1_DMSO_200M_050219_1,15150,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15151 74.54 499.0 276650.0 25 0 24370.0 + -1 VVLEGASLETV 11 110 1115.8012940036058 3344.3820526110176 3 1116.471850574017 MULTI CID FTMS 0 0 0 15136 249060.109375 0.9307967030560672 1 -0.1180343627929687 15 ENSG00000126749|ENST00000599672|EMG1 3 YYG[MN]VTE{I|L}SVV 12 -1 59.013 0.0 0.0 1.7645 0.0 0.0 1618.56132614793 367.1639498346313 1985.7252759825608 0.0 0.0 0.0 0.0 0 0.0 0.0 2.1747425010840047 0.0 YYG[MN]VTE{I|L}SVV 1.7645 - 16913 + 1 1.164 97167.2 1.0 9562 5587 15136 HBL1_DMSO_200M_050219_1,15151 HBL1_DMSO_200M_050219_1,15151, False False VVLEGASLETV 74.539999 1116.47185057402 1548984.25 15136.0 ENSG00000126749|ENST00000599672|EMG1 6.866003513336182 1.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15152 74.548 430.0 434040.0 25 0 66634.0 + 14694 IIVAVHYHVKS 11 147 633.3694136787589 1264.7242744243176 2 633.3686401247978 MULTI CID FTMS 0 0 0 15136 219711.53125 0.1436613687914835 -16 1.084808349609375 16 Unmodified _IIVAVHYHVKS_ REV__ENSG00000120088|ENST00000314537|CRHR1;REV__ENST00000582766.5_1_17:43884387-43907895:+|nuORF;REV__nc|ENSG00000263715|P34998-1|CRHR1;REV__nc|ENSG00000263715|P34998-3|CRHR1;REV__nc|ENSG00000263715|P34998-4|CRHR1 8.155526934196011 0.8366696279279818 3 [{I|L}P]MKY 5 -1 18.835 0.0 0.0 1.4892 0.0 0.0 0.0 629.3729441352065 629.3729441352065 8.456108943647365 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.7742275032520141 [{I|L}P]MKY 1.4892 - 355 1 1.164 141211.3 1.0 9563 5587 15136 HBL1_DMSO_200M_050219_1,15152 HBL1_DMSO_200M_050219_1,15152,IIVAVHYHVKS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15153 74.558 523.0 143750.0 25 0 15410.0 -1 0 107 1117.4747032805085 2232.934853627817 2 1117.976000964642 MULTI CID FTMS 0 0 0 15136 209748.875 0.2905090211065977 2 -0.1451263427734375 17 3 {[TV]|[{I|L}S]}AAN{I|L}S{I|L}ETV 11 -1 53.833 0.0 0.0 2.4109 0.0 0.0 0.0 1131.3205786237438 1131.3205786237438 30.94730852532569 0.0 0.0 0.0 0 0.0 1.154901959985743 2.6747425010840047 0.4247425010840047 {[TV]|[{I|L}S]}AAN{I|L}S{I|L}ETV 2.4109 - 12980 1 1.164 52760.1 1.0 9564 5587 15136 HBL1_DMSO_200M_050219_1,15153 HBL1_DMSO_200M_050219_1,15153, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15154 74.572 800.0 143290.0 25 0 7927.4 + -1 LPYTGAHDGSFATL 14 155 725.3532923246177 1448.6920317160352 2 725.3561889529228 MULTI CID FTMS 0 0 0 15136 206382.5625 0.6788095531029268 2 -0.1451263427734375 18 Oxidation (M) _LM(Oxidation (M))LCVYMYERL_ nc|ENSG00000064687|Q8IZY2-2|ABCA7;ENSG00000064687|ENST00000263094|ABCA7 17.11289562659939 0.6791789249425932 3 {I|L}PY 3 -1 39.411 0.0 0.0 2.7205 0.0 0.0 0.0 1072.4717501276002 1072.4717501276002 5.295000083553205 0.0 0.0 0.0 0 0.75 1.5228787452803376 0.0 0.0 {I|L}PY 2.7205 - 2260 + 1 1.164 84084.2 0.8500000238418579 9565 5587 15136 HBL1_DMSO_200M_050219_1,15154 HBL1_DMSO_200M_050219_1,15154,LMLCVYMYERL False False LPYTGAHDGSFATL 74.571918 725.356188952923 3367763.5 15136.0 nc|ENSG00000064687|Q8IZY2-2|ABCA7;;ENSG00000064687|ENST00000263094|ABCA7 6.144070784250896 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15155 74.586 800.0 531290.0 25 0 39067.0 -1 MLRMGISL 8 262 468.75328946903977 0 468.7447082400322 PEAK CID FTMS 0 0 0 -1 0 19 Oxidation (M) _M(Oxidation (M))LRMGISL_ ENST00000519672.1_1_5:146788331-146833150:-|nuORF 20.871210003555333 0.4015059659087983 3 VV{I|L}H 4 -1 17.423 0.0 0.0 1.8624 0.0 0.0 130.9926863611327 353.19721399478755 484.18990035592026 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV{I|L}H 1.8624 - 906 + 1 1.164 317852.2 0.8799999952316284 9566 5587 15136 HBL1_DMSO_200M_050219_1,15155 HBL1_DMSO_200M_050219_1,15155,MLRMGISL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15156 74.601 800.0 229730.0 25 0 17217.0 + 39938 VFYFSVKML 9 220 378.54138720144863 1132.602332204546 3 378.5405456423759 MULTI CID FTMS 0 0 0 15136 198759.171875 0.7262233901649228 2 -0.1451263427734375 20 Unmodified _VFYFSVKML_ REV__ENST00000517937.1_1_6:56599965-56716690:-|nuORF 22.736283301280096 0.2418982879461534 3 VY{M(Oxidation (M))|F} 3 -1 43.798 0.0 0.0 3.867 0.0 0.0 0.0 720.3798027970147 720.3798027970147 30.610312860818773 0.0 0.0 0.0 0 0.4105162882498865 2.0 0.0 0.0 VY{M(Oxidation (M))|F} 3.867 - 296 + 1 1.164 149583.0 0.8600000143051147 9567 5587 15136 HBL1_DMSO_200M_050219_1,15156 HBL1_DMSO_200M_050219_1,15156,VFYFSVKML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15158 74.605 1.9 17234000.0 25 0 3834900.0 + 4066 DAMKYTIVV 9 54 520.2782689739805 1038.541985014761 2 520.2791625857353 MULTI CID FTMS 0 0 0 15157 22723488.0 0.3295484776675262 3 -0.2093048095703125 1 Unmodified _DAMKYTIVV_ ENSG00000152234|ENST00000398752|ATP5F1A;nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A 34.40172386719151 0.1061884637610825 3 YT{I|L}VV 5 4 37.391 0.0 0.0 3.6003 0.0 0.0 445.1973744123063 0.0 445.1973744123063 0.0 21.90614065464281 0.0 0.0 0 0.8182503180159344 0.0 0.8494850021680094 0.0 + YT{I|L}VV 3.6003 + + 53 1 1.164 32019.4 1.0 9568 5588 15157 HBL1_DMSO_200M_050219_1,15158 HBL1_DMSO_200M_050219_1,15158,DAMKYTIVV True True DAMKYTIVV 74.604922 520.279162585735 2216388352.0 15157.0 nc|ENSG00000152234|P25705-2|ATP5F1A;;nc|ENSG00000152234|P25705-3|ATP5F1A;;ENSG00000152234|ENST00000398752|ATP5F1A 8.20780356725057 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15159 74.606 3.2 8843000.0 25 0 3141500.0 + -1 YYYDGDVGNYYY 12 35 777.8067631544496 1553.5989733756992 2 777.8074828982353 MULTI CID FTMS 0 0 0 15157 12170056.0 1.0 0 0.0 2 2 Carbamidomethyl (C),Oxidation (M) _LEC(Carbamidomethyl (C))VYSQWC(Carbamidomethyl (C))M(Oxidation (M))Y_ ENST00000481281.5_1_1:32757770-32793222:+|nuORF;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENSG00000116478|ENST00000373548|HDAC1 0.3506318815782774 0.8734936314171269 3 V[NG]YYYYY 8 -1 33.193 0.0 0.0 2.1365 0.0 0.0 450.1391163556656 0.0 450.1391163556656 0.0 17.708122007288623 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.3807196863200844 V[NG]YYYYY 2.1365 - 23 1 1.164 31082.4 1.0 9569 5588 15157 HBL1_DMSO_200M_050219_1,15159 HBL1_DMSO_200M_050219_1,15159,LECVYSQWCMY False False YYYDGDVGNYYY 74.606115 777.807482898235 748291824.0 15157.0 ENST00000481281.5_1_1:32757770-32793222:+|nuORF;;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 4.393350124359131 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15160 74.607 6.7 6920200.0 25 0 645720.0 + 26551 NVIQTVPNL 9 75 499.2875765920345 0 499.2874328494072 PEAK CID FTMS 0 0 0 15157 6011052.5 1.0 0 0.0 3 Unmodified _NVIQTVPNL_ ENSG00000196510|ENST00000455511|ANAPC7;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 39.957323273325 0.0619271662220897 3 Q{I|L}A{I|L} 4 7 12.907 0.0 0.0 1.2952 0.0 0.0 360.19952954950026 208.0731600397094 568.2726895892097 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L}A{I|L} 1.2952 - 105 + 1 1.164 40256.6 1.0 9570 5588 15157 HBL1_DMSO_200M_050219_1,15160 HBL1_DMSO_200M_050219_1,15160,NVIQTVPNL True True NVIQTVPNL 74.607292 499.287432849407 41007612.0 15157.0 nc|ENSG00000196510|Q9UJX3-2|ANAPC7;;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;;ENSG00000196510|ENST00000455511|ANAPC7 5.961955547332764 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15161 74.608 13.0 1421800.0 25 0 123000.0 8740 EVNRRSKFK 9 45 582.3353301673142 1162.6561074014282 2 582.3354980349541 MULTI CID FTMS 0 0 0 15157 4745767.0 0.9047869890352584 -2 0.24359130859375 4 Unmodified _EVNRRSKFK_ ENST00000422748.5_2_7:134653379-134653538:+|nuORF 1.4819007175156935 0.8629517609969429 3 S 1 8 5.4846 0.0 0.0 0.47173 0.0 0.0 421.261711504747 651.3245067691399 1072.586218273887 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + S 0.47173 + + 1 + 1 1.164 19111.5 1.0 9571 5588 15157 HBL1_DMSO_200M_050219_1,15161 HBL1_DMSO_200M_050219_1,15161,EVNRRSKFK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15162 74.61 7.3 5793000.0 25 0 531440.0 + 41328 VPILAPRI 8 63 439.79465879941694 877.5747646656339 2 439.7947875857353 MULTI CID FTMS 0 0 0 15157 4720170.5 0.3267038269617545 -4 0.372161865234375 5 Unmodified _VPILAPRI_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 30.22481116460888 0.4082965392918993 3 VP{I|L}{I|L}A[RP]{I|L} 8 0 + 57.63 0.0 0.0 6.5669 6.5669 93.845 0.0 0.0 0.0 25.12070344032047 3.645162531850872 3.645162531850872 57.62964706465603 0 0.3807196863200844 1.2218487496163564 0.0 0.0 + + VP{I|L}{I|L}A[RP]{I|L} 6.5669 + + 61 + 1 1.164 38804.3 1.0 9572 5588 15157 HBL1_DMSO_200M_050219_1,15162 HBL1_DMSO_200M_050219_1,15162,VPILAPRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15163 74.611 9.1 4672400.0 25 0 618450.0 21655 LPLKLSHV 8 56 453.7921119878436 905.5696710424872 2 453.7922241091728 MULTI CID FTMS 0 0 0 15157 4599304.5 0.0718102033497843 20 -1.4373626708984375 6 Unmodified _LPLKLSHV_ ENSG00000173621|ENST00000309602|LRFN4 15.847184025352805 0.6768015514314958 3 {I|L}PPP 4 6 53.8 0.0 0.0 5.941 0.0 0.0 0.0 498.30478845767817 498.30478845767817 42.0172823798338 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPP 5.941 - 20 + 1 1.164 37696.4 1.0 9573 5588 15157 HBL1_DMSO_200M_050219_1,15163 HBL1_DMSO_200M_050219_1,15163,LPLKLSHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15164 74.612 17.0 2113500.0 25 0 431150.0 + 14727 IKWQVFLML 9 67 589.342962126194 1176.671371319188 2 589.3431884646416 MULTI CID FTMS 0 0 0 15157 3598789.75 0.7414034460278159 -2 0.24359130859375 7 Unmodified _IKWQVFLML_ REV__ENST00000310169.2_1_4:40337858-40337948:+|nuORF 0.6014990680409731 0.8936861360942873 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.164 32368.6 1.0 9574 5588 15157 HBL1_DMSO_200M_050219_1,15164 HBL1_DMSO_200M_050219_1,15164,IKWQVFLML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15165 74.613 12.0 3248000.0 25 0 397970.0 + 6270 DTVEPWVKV 9 69 536.787520797261 1071.560488661322 2 536.7877075076103 MULTI CID FTMS 0 0 0 15157 3452803.5 0.01102123085012 15 -1.0834197998046875 8 Unmodified _DTVEPWVKV_ REV__ENSG00000155275|ENST00000389737|TRMT44;REV__nc|ENSG00000155275|Q8IYL2-2|TRMT44 36.04419817259434 0.0971720506436186 3 [EP]WVDTVKV 9 -1 + 43.294 0.0 0.0 4.0402 4.0402 75.851 0.0 0.0 0.0 5.642492736872597 6.020848109921403 5.642492736872597 4.018637558036666 0 0.3182503180159344 0.0 0.4247425010840047 0.0 [EP]WVDTVKV;[EP]WVKVDTV;{[MG]|[TS]}[HS]VDTVKV;[W{M(Oxidation (M))|F}]VR[HQ]TV;{[MG]|[TS]}[HS]VKVDTV;{[QV]|[N{I|L}]|[RA]|[KV]}[EP]WVDTV;{[TV]|[{I|L}S]}[WP][VG]VDTV;{[ES]|[DT]|[{I|L}C]}EE[RP]VKV 4.0402;3.6652;2.8095;2.7386;2.4345;1.4701;1.3888;0.44519 -;-;-;-;-;-;-;- 125 1 1.164 36707.0 1.0 9575 5588 15157 HBL1_DMSO_200M_050219_1,15165 HBL1_DMSO_200M_050219_1,15165,DTVEPWVKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15166 74.614 16.0 3325900.0 25 0 468740.0 + 31930 RVAQLEQVYI 10 57 609.8459423103815 1217.6773316875629 2 609.8457519412041 MULTI CID FTMS 0 0 0 15157 2363996.5 0.6553331382208164 -2 0.24359130859375 9 Unmodified _RVAQLEQVYI_ ENSG00000100028|ENST00000215829|SNRPD3;nc|ENSG00000286070|P62318-2|SNRPD3 22.65808497894818 0.4596126414678359 3 Q{I|L}EQVY{I|L} 7 3 55.477 0.0 0.0 4.556 0.0 0.0 326.20723159004064 0.0 326.20723159004064 0.0 39.27903232049481 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + Q{I|L}EQVY{I|L} 4.556 + + 86 1 1.164 46106.9 1.0 9576 5588 15157 HBL1_DMSO_200M_050219_1,15166 HBL1_DMSO_200M_050219_1,15166,RVAQLEQVYI False True RVAQLEQVYI 74.614365 609.845751941204 43061144.0 15157.0 ENSG00000100028|ENST00000215829|SNRPD3;;nc|ENSG00000286070|P62318-2|SNRPD3 6.40589173634847 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15167 74.616 16.0 2448300.0 25 0 327340.0 + 44511 YPDGRIIMV 9 65 532.2839278741702 1062.5533028151403 2 532.2835571169853 MULTI CID FTMS 0 0 0 15157 2249093.75 0.9406573076072122 -2 0.24359130859375 10 Unmodified _YPDGRIIMV_ ENSG00000141446|ENST00000269214|ESCO1 27.628801355627647 0.1796483985696185 3 YPD 3 6 45.49 0.0 0.0 4.2812 0.0 0.0 0.0 684.388694955165 684.388694955165 24.872118693881543 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + YPD 4.2812 + + 48 + 1 1.164 37335.0 1.0 9577 5588 15157 HBL1_DMSO_200M_050219_1,15167 HBL1_DMSO_200M_050219_1,15167,YPDGRIIMV False True YPDGRIIMV 74.615545 532.283557116985 109063224.0 15157.0 ENSG00000141446|ENST00000269214|ESCO1 5.495372772216797 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15168 74.617 21.0 2162200.0 25 0 210520.0 + 24879 MPNENIPEL 9 75 528.7558268671903 1055.4971008011803 2 528.7561523318291 MULTI CID FTMS 0 0 0 15157 1477033.625 0.5181931381493559 -2 0.24359130859375 11 Unmodified _MPNENIPEL_ ENSG00000115216|ENST00000379852|NRBP1;ENST00000460499.5_1_2:27659579-27664676:+|nuORF 24.020572477871973 0.2255576514309169 3 [EP]NNM{I|L} 6 5 54.698 0.0 0.0 5.1822 0.0 0.0 0.0 354.16787353971705 354.16787353971705 39.21327198560853 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.7302046884880937 [EP]NNM{I|L} 5.1822 - 249 1 1.164 44717.8 1.0 9578 5588 15157 HBL1_DMSO_200M_050219_1,15168 HBL1_DMSO_200M_050219_1,15168,MPNENIPEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15169 74.618 25.0 1800100.0 25 0 366780.0 + 4564 DAYRMLSRL 9 44 562.7974903090313 1123.5804276848626 2 562.7975952029228 MULTI CID FTMS 0 0 0 15157 1329001.125 0.7162674011500286 -2 0.24359130859375 12 Unmodified _DAYRMLSRL_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 8.745405648335112 0.6093864874670651 3 {I|L}D 2 8 20.969 0.0 0.0 1.8663 0.0 0.0 0.0 892.4467685462579 892.4467685462579 7.474250108400469 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D 1.8663 - 21 + 1 1.164 42181.8 1.0 9579 5588 15157 HBL1_DMSO_200M_050219_1,15169 HBL1_DMSO_200M_050219_1,15169,DAYRMLSRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15170 74.619 45.0 1416100.0 25 0 157240.0 + 4676 DAYVLPKLYVK 11 92 654.8817637143413 1307.7489744954826 2 655.3829223513603 MULTI CID FTMS 0 0 0 15157 971967.625 0.2018806735395617 -4 0.372161865234375 13 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 59.36838082759317 0.0717085717264091 3 {[DA]|[EG]}YV{I|L}PK{I|L}[YV]K 11 0 + 63.369 0.0 0.0 4.8457 4.8457 88.271 0.0 0.0 0.0 47.77009389047288 7.059097988984206 7.059097988984206 63.36903768191485 0 1.5941876774005248 1.3010299956639813 0.0 0.9247425010840048 + + {[DA]|[EG]}YV{I|L}PK{I|L}[YV]K 4.8457 + + 126 + 1 1.164 53544.7 1.0 9580 5588 15157 HBL1_DMSO_200M_050219_1,15170 HBL1_DMSO_200M_050219_1,15170,DAYVLPKLYVK True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15171 74.62 47.0 1272000.0 25 0 122780.0 + 4566 DAYRMLSRL 9 87 375.5341108938632 1123.5805032817896 3 375.5340759158134 MULTI CID FTMS 0 0 0 15157 797600.0 0.5996358467737198 -2 0.24359130859375 14 Unmodified _DAYRMLSRL_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 20.580933911654288 0.2795815587326093 3 DAYRM{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 9 2 + 82.669 0.0 0.0 7.3576 7.3576 95.55 0.0 0.0 0.0 71.40982467100332 6.307578903143366 6.307578903143366 35.74031267727719 0 0.805462187404089 2.0 0.0 0.0 DAYRM{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};WY[VG]M{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 7.3576;4.1767 -;- 89 + 1 1.164 54066.5 1.0 9581 5588 15157 HBL1_DMSO_200M_050219_1,15171 HBL1_DMSO_200M_050219_1,15171,DAYRMLSRL False True DAYRMLSRL 74.620413 375.534075915813 33278310.0 15157.0 ENSG00000169093|ENST00000381317|ASMTL;;nc|ENSG00000292339|O95671-3|ASMTL;;nc|ENSG00000292339|O95671-2|ASMTL 5.326350053151448 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15172 74.622 30.0 965230.0 25 0 88888.0 23181 LSRPKPWHK 9 57 574.836125945584 1147.6576989579678 2 574.8363525271416 MULTI CID FTMS 0 0 0 15157 787824.0625 0.4756680405805865 -9 0.847198486328125 15 Unmodified _LSRPKPWHK_ ENSG00000111249|ENST00000261726|CUX2 2.059750862983233 0.8427793054688888 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.164 29458.9 1.0 9582 5588 15157 HBL1_DMSO_200M_050219_1,15172 HBL1_DMSO_200M_050219_1,15172,LSRPKPWHK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15173 74.623 27.0 983930.0 25 0 94955.0 + 36728 TDPYQSLDL 9 58 526.2505472081036 1050.4865414830072 2 526.2503539919853 MULTI CID FTMS 0 0 0 15157 679962.6875 0.9913623724894968 -1 0.1180343627929687 16 Unmodified _TDPYQSLDL_ REV__ENSG00000077935|ENST00000357450|SMC1B;REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B 12.531546534597751 0.4974689918368763 3 D{I|L} 2 -1 14.57 0.0 0.0 1.3869 0.0 0.0 804.3645149710916 0.0 804.3645149710916 0.0 2.562645746560841 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 D{I|L} 1.3869 + + 36 + 1 1.164 27940.2 1.0 9583 5588 15157 HBL1_DMSO_200M_050219_1,15173 HBL1_DMSO_200M_050219_1,15173,TDPYQSLDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15174 74.624 43.0 703490.0 25 0 95487.0 + 1073 AGILLVCDDI 10 65 516.2741984091926 1030.5338438851852 2 516.7764770388603 MULTI CID FTMS 0 0 0 15157 632944.25 0.1256305402390564 6 -0.4463348388671875 17 Unmodified _AGILLVCDDI_ REV__ENST00000358465.6_1_1:114939922-114939988:-|nuORF 7.289230182591677 0.6929195370588109 3 {I|L} 1 -1 15.485 0.0 0.0 1.5026 0.0 0.0 899.4389322414337 0.0 899.4389322414337 0.0 5.30726239543597 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5026 + + 32 + 1 1.164 29033.5 1.0 9584 5588 15157 HBL1_DMSO_200M_050219_1,15174 HBL1_DMSO_200M_050219_1,15174,AGILLVCDDI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15175 74.625 41.0 631450.0 25 0 45866.0 + 18137 KTMEDTLMTV 10 62 584.782653251757 1167.550753570314 2 584.7820312380791 MULTI CID FTMS 0 0 0 15157 625601.0 0.2831509820086715 3 -0.2093048095703125 18 Unmodified _KTMEDTLMTV_ ENSG00000132254|ENST00000396777|ARFIP2;nc|ENSG00000132254|P53365-2|ARFIP2;nc|ENSG00000132254|P53365-3|ARFIP2 16.149105407346934 0.5765757077271437 3 [{M(Oxidation (M))|F}V]C{I|L} 4 8 33.188 0.0 0.0 2.8425 0.0 0.0 0.0 702.2744234674436 702.2744234674436 12.754537344402904 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]C{I|L} 2.8425 - 31 + 1 1.164 26524.4 1.0 9585 5588 15157 HBL1_DMSO_200M_050219_1,15175 HBL1_DMSO_200M_050219_1,15175,KTMEDTLMTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15176 74.627 55.0 995880.0 25 0 86901.0 + 18324 KVLELMNKL 9 103 544.3310854579273 1086.6476179826543 2 544.3310424685478 MULTI CID FTMS 0 0 0 15157 572397.9375 0.8279420416785848 1 -0.0270919799804687 19 Unmodified _KVLELMNKL_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 10.150570793230772 0.5619192000662246 3 KV{I|L} 3 6 24.693 0.0 0.0 2.2724 0.0 0.0 0.0 743.3784273736936 743.3784273736936 13.152894110309028 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + KV{I|L} 2.2724 + + 147 + 1 1.164 46253.4 1.0 9586 5588 15157 HBL1_DMSO_200M_050219_1,15176 HBL1_DMSO_200M_050219_1,15176,KVLELMNKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15177 74.628 39.0 1130100.0 25 0 159910.0 14922 ILMDHNRKS 9 77 557.2956199572142 0 557.2955810427666 PEAK CID FTMS 0 0 0 15157 529566.0625 1.0 0 0.0 20 Unmodified _ILMDHNRKS_ ENSG00000070019|ENST00000261170|GUCY2C 13.90604991867851 0.2674652324371145 3 MS 2 7 19.464 0.0 0.0 1.7494 0.0 0.0 226.16809011885812 665.3163602700367 891.4844503888949 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 MS 1.7494 - 112 + 1 1.164 42016.6 1.0 9587 5588 15157 HBL1_DMSO_200M_050219_1,15177 HBL1_DMSO_200M_050219_1,15177,ILMDHNRKS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15179 74.632 3.4 17876000.0 25 0 2495600.0 + 32209 RVVDYLTKL 9 72 553.8316687177116 1105.6487845022232 2 553.8322631716728 MULTI CID FTMS 0 0 0 15178 14708432.0 1.0 0 0.0 1 Unmodified _RVVDYLTKL_ ENSG00000178425|ENST00000319550|NT5DC1;ENST00000417846.2_1_6:116432031-116439170:+|nuORF;nc|ENSG00000178425|Q5TFE4-2|NT5DC1 34.93206674587334 0.1032771302489716 3 T{I|L}Y 3 8 34.693 0.0 0.0 3.1378 0.0 0.0 259.18832373419485 466.2421459606536 725.4304696948484 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 T{I|L}Y 3.1378 - 43 + 1 1.172 50274.6 1.0 9588 5589 15178 HBL1_DMSO_200M_050219_1,15179 HBL1_DMSO_200M_050219_1,15179,RVVDYLTKL True True RVVDYLTKL 74.632011 553.832263171673 303143064.0 15178.0 ENST00000417846.2_1_6:116432031-116439170:+|nuORF;;ENSG00000178425|ENST00000319550|NT5DC1;;nc|ENSG00000178425|Q5TFE4-2|NT5DC1 5.767326990763347 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15180 74.633 12.0 4610000.0 25 0 764220.0 + 31742 RRVERPFAT 9 68 566.3222542769303 1130.6299556206604 2 566.3222534060478 MULTI CID FTMS 0 0 0 15178 4791803.0 0.969001888033821 -1 0.0270919799804687 2 Unmodified _RRVERPFAT_ REV__ENSG00000187605|ENST00000409262|TET3;REV__nc|ENSG00000187605|O43151-2|TET3 2.059750862983233 0.8427793054688888 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.172 48185.0 1.0 9589 5589 15178 HBL1_DMSO_200M_050219_1,15180 HBL1_DMSO_200M_050219_1,15180,RRVERPFAT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15181 74.634 39.0 898820.0 25 0 85575.0 + -1 PSAFLQVSL 9 57 502.27585584449577 1002.5371587557916 2 502.7748901247978 MULTI CID FTMS 0 0 0 15178 1002546.5 0.4125582672944943 11 -0.8718414306640625 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PSAFLQVSL_ REV__ENST00000263934.10_1_1:10397579-10399841:+|nuORF 12.531546534597751 0.4974689918368763 3 [EP]G{I|L}H{I|L} 6 -1 29.385 0.0 0.0 2.9311 0.0 0.0 0.0 353.1693668661539 353.1693668661539 12.830918867322293 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [EP]G{I|L}H{I|L} 2.9311 - 89 1 1.172 33508.0 1.0 9590 5589 15178 HBL1_DMSO_200M_050219_1,15181 HBL1_DMSO_200M_050219_1,15181,PSAFLQVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15182 74.636 42.0 1253400.0 25 0 111640.0 + -1 MAYPDLNEI 9 88 541.246889921249 1080.479226909298 2 541.2477294802666 MULTI CID FTMS 0 0 0 15178 884210.375 0.4974059056273094 4 -0.3032684326171875 4 Oxidation (M) _M(Oxidation (M))AYPDLNEI_ chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-2|SP140;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;nc|ENSG00000079263|Q13342-6|SP140;nc|ENSG00000079263|Q13342-4|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;ENSG00000079263|ENST00000392045|SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;nc|ENSG00000079263|Q13342-3|SP140 18.13498045792455 0.3457906370836843 3 {[MS]|[{M(Oxidation (M))|F}A]}Y[DP]{I|L} 6 -1 18.513 0.0 0.0 1.7134 0.0 0.0 0.0 371.156447938848 371.156447938848 -1.1406587909023678 0.0 -1.1406587909023678 0.0 0 0.0 0.8860566476931632 0.3252574989159953 0.0 {[MS]|[{M(Oxidation (M))|F}A]}Y[DP]{I|L} 1.7134 + + 195 1 1.172 47556.3 1.0 9591 5589 15178 HBL1_DMSO_200M_050219_1,15182 HBL1_DMSO_200M_050219_1,15182,MAYPDLNEI False False MAYPDLNEI 74.635569 541.247729480267 18450398.0 15178.0 chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;;nc|ENSG00000079263|Q13342-5|SP140;;nc|ENSG00000079263|Q13342-2|SP140;;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-6|SP140;;nc|ENSG00000079263|Q13342-4|SP140;;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;;ENSG00000079263|ENST00000392045|SP140;;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-3|SP140 3.858222444852193 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15183 74.637 67.0 1625100.0 25 0 159420.0 + 4680 DAYVLPKLYVK 11 97 436.9239600897196 1307.7500508693588 3 436.9237853884697 MULTI CID FTMS 0 0 0 15178 837298.0 0.1606915298683911 -3 0.2706832885742187 5 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 45.739877483867886 0.1412225664835785 3 {[DA]|[EG]}YV{I|L}PK{I|L}YVK 11 0 + 78.401 0.0 0.0 5.9951 5.9951 85.279 0.0 0.0 0.0 24.436052932308755 6.866654986684736 6.866654986684736 6.866654986684736 0 0.7614393726401688 2.0 0.0 0.2887254899964357 + + {[DA]|[EG]}YV{I|L}PK{I|L}YVK;{[DA]|[EG]}YV{I|L}PK{I|L}YKV 5.9951;5.47 +;- + 514 + 1 1.172 90532.9 1.0 9592 5589 15178 HBL1_DMSO_200M_050219_1,15183 HBL1_DMSO_200M_050219_1,15183,DAYVLPKLYVK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15184 74.639 108.0 680300.0 25 0 72797.0 + 31990 RVFTEANLVSV 11 58 617.8432897932076 1233.6720266532152 2 617.8436157107353 MULTI CID FTMS 0 0 0 15178 665967.5 0.6833939605702976 2 -0.1822128295898437 6 Unmodified _RVFTEANLVSV_ ENSG00000112159|ENST00000369393|MDN1 22.48609341952514 0.5642223135719058 3 [R{M(Oxidation (M))|F}]{I|L}NAETVVSV 11 6 + 74.756 0.0 0.0 6.0596 6.0596 89.66 0.0 0.0 0.0 40.82828264870275 2.825160557860926 2.825160557860926 12.935695106011837 0 0.5 0.0 0.4247425010840047 0.3807196863200844 [R{M(Oxidation (M))|F}]{I|L}NAETVVSV;[R{M(Oxidation (M))|F}]{I|L}GGAETVVSV;[MT]V[KA]AETVVSV;[R{M(Oxidation (M))|F}]{I|L}{[CP]|[EA]}NTVVSV;{[CT]|[{M(Oxidation (M))|F}G]}V{I|L}[WQ]TVVSV;[MT]V{I|L}[TA]NTVVSV;[MT]V{I|L}[TA]GGTVVSV;[R{M(Oxidation (M))|F}]{I|L}{[CP]|[EA]}GGTVVSV;[R{M(Oxidation (M))|F}]{I|L}[WQ][W{I|L}]SV 6.0596;5.0111;4.9284;4.397;4.3785;4.2976;3.5601;3.3485;2.8506 -;-;-;-;-;-;-;-;- 306 + 1 1.172 60211.0 1.0 9593 5589 15178 HBL1_DMSO_200M_050219_1,15184 HBL1_DMSO_200M_050219_1,15184,RVFTEANLVSV False True RVFTEANLVSV 74.639459 617.843615710735 17515488.0 15178.0 ENSG00000112159|ENST00000369393|MDN1 8.43830649058024 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15185 74.646 384.0 309790.0 25 0 67655.0 -1 0 68 1132.8117749941398 3395.41349558262 3 1133.479174792767 MULTI CID FTMS 0 0 0 15178 545560.375 0.6762320812132405 2 -0.1822128295898437 7 3 D[Y{I|L}]VT 5 -1 16.555 0.0 0.0 0.48756 0.0 0.0 2147.7499063868245 653.3330172174436 2801.082923604268 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1237125054200234 0.0 D[Y{I|L}]VT 0.48756 - 188 + 1 1.172 100637.8 1.0 9594 5589 15178 HBL1_DMSO_200M_050219_1,15185 HBL1_DMSO_200M_050219_1,15185, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15186 74.648 54.0 766310.0 25 0 73262.0 + 10751 FYISPRSTF 9 54 559.2866662924771 1116.558779651754 2 559.2867309451103 MULTI CID FTMS 0 0 0 15178 530720.9375 1.0 0 0.0 8 Unmodified _FYISPRSTF_ ENSG00000101336|ENST00000375852|HCK;nc|ENSG00000101336|P08631-2|HCK;nc|ENSG00000101336|P08631-3|HCK;nc|ENSG00000101336|P08631-4|HCK 12.240655878213236 0.5053430591993562 3 S{I|L}YE 4 8 36.186 0.0 0.0 3.2408 0.0 0.0 606.3129412049037 0.0 606.3129412049037 0.0 25.908038631752017 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 S{I|L}YE 3.2408 - 16 1 1.172 39492.1 1.0 9595 5589 15178 HBL1_DMSO_200M_050219_1,15186 HBL1_DMSO_200M_050219_1,15186,FYISPRSTF False True FYISPRSTF 74.647788 559.28673094511 3747241.25 15178.0 nc|ENSG00000101336|P08631-3|HCK;;nc|ENSG00000101336|P08631-4|HCK;;ENSG00000101336|ENST00000375852|HCK;;nc|ENSG00000101336|P08631-2|HCK 2.5377742449442544 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15187 74.656 443.0 381990.0 25 0 60390.0 + 21799 LPNHMMLKI 9 168 366.2049698625379 1095.5930801878137 3 366.2049133181572 MULTI CID FTMS 0 0 0 15178 479992.75 1.0 0 0.0 9 Unmodified _LPNHMMLKI_ ENSG00000171824|ENST00000376936|EXOSC10;nc|ENSG00000171824|Q01780-2|EXOSC10 43.85829265575387 0.0542763391141878 3 [NP]HMM{I|L} 6 3 43.708 0.0 0.0 3.9894 0.0 0.0 0.0 369.2500669339453 369.2500669339453 -14.553514442628227 0.0 -14.553514442628227 0.0 0 0.0 1.2218487496163564 0.0 1.5114393726401687 + [NP]HMM{I|L} 3.9894 + + 757 1 1.172 136566.1 1.0 9596 5589 15178 HBL1_DMSO_200M_050219_1,15187 HBL1_DMSO_200M_050219_1,15187,LPNHMMLKI True True LPNHMMLKI 74.655655 366.204913318157 2873719.5 15178.0 ENSG00000171824|ENST00000376936|EXOSC10;;nc|ENSG00000171824|Q01780-2|EXOSC10 2.725313425064087 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15188 74.659 182.0 768410.0 25 0 96801.0 + 43843 YFHIGSNAL 9 164 511.2591128540573 0 511.2589294314384 PEAK CID FTMS 0 0 0 15178 492731.71875 0.645573294285236 -1 0.0270919799804687 10 Unmodified _YFHIGSNAL_ ENSG00000146281|ENST00000275072|PM20D2 50.855029805455786 0.029329839088833 3 ANSG{I|L}{[{M(Oxidation (M))|F}D]|MM}N 8 8 42.714 0.0 0.0 4.1856 0.0 0.0 131.0975581282334 68.05140100650624 199.14895913473964 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 1.035666875892183 0.1747425010840047 ANSG{I|L}{[{M(Oxidation (M))|F}D]|MM}N 4.1856 - 744 + 1 1.172 109011.8 1.0 9597 5589 15178 HBL1_DMSO_200M_050219_1,15188 HBL1_DMSO_200M_050219_1,15188,YFHIGSNAL True True YFHIGSNAL 74.659188 511.258929431438 9472676.0 15178.0 ENSG00000146281|ENST00000275072|PM20D2 5.172410488128662 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15189 74.661 83.0 686820.0 25 0 97852.0 + + 1125 AVISQISDI 9 96 472.258785161171 942.503017389142 2 473.2661315798759 MULTI CID FTMS 0 0 0 15178 456974.5625 0.0926001778954516 -8 0.7023544311523438 11 Unmodified _AGSLIGPTDI_ ENST00000522752.5_1_8:38614850-38697853:+|nuORF;nc|ENSG00000147526|O75410-4|TACC1;nc|ENSG00000147526|O75410-7|TACC1;nc|ENSG00000147526|O75410-9|TACC1;nc|ENSG00000147526|O75410-5|TACC1;nc|ENSG00000147526|O75410-2|TACC1;nc|ENSG00000147526|O75410-3|TACC1;ENST00000522955.5_1_8:38663104-38684943:+|nuORF;ENSG00000147526|ENST00000317827|TACC1;nc|ENSG00000147526|O75410-10|TACC1;nc|ENSG00000147526|O75410-6|TACC1 25.399314129420983 0.3980215340001851 3 {[TV]|[{I|L}S]}Q 3 -1 22.074 0.0 0.0 2.3421 0.0 0.0 0.0 611.3046280671294 611.3046280671294 -4.454616243481134 0.0 -4.454616243481134 0.0 0 0.0 0.619788758288394 0.5418727718234408 0.0 {[TV]|[{I|L}S]}Q 2.3421 - 200 1 1.172 48914.1 1.0 9598 5589 15178 HBL1_DMSO_200M_050219_1,15189 HBL1_DMSO_200M_050219_1,15189,AGSLIGPTDI False False AVISQISDI 74.661055 473.266131579876 2434811.0 15178.0 ENST00000522752.5_1_8:38614850-38697853:+|nuORF;;nc|ENSG00000147526|O75410-4|TACC1;;nc|ENSG00000147526|O75410-7|TACC1;;nc|ENSG00000147526|O75410-9|TACC1;;nc|ENSG00000147526|O75410-5|TACC1;;nc|ENSG00000147526|O75410-2|TACC1;;nc|ENSG00000147526|O75410-3|TACC1;;ENST00000522955.5_1_8:38663104-38684943:+|nuORF;;ENSG00000147526|ENST00000317827|TACC1;;nc|ENSG00000147526|O75410-10|TACC1;;nc|ENSG00000147526|O75410-6|TACC1 2.9335462947686515 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15190 74.663 76.0 676590.0 25 0 126540.0 20215 LLCDLPIQV 9 98 507.2871405317021 1012.559728130204 2 507.2882568240166 MULTI CID FTMS 0 0 0 15178 347721.625 0.2594868997394938 -14 1.127899169921875 12 Unmodified _LLCDLPIQV_ ENSG00000161981|ENST00000293861|SNRNP25;ENST00000493672.1_1_16:103905-105855:+|nuORF;nc|ENSG00000161981|Q9BV90|SNRNP25 18.13498045792455 0.3457906370836843 3 V 1 8 13.979 0.0 0.0 1.3806 0.0 0.0 895.4802354928003 0.0 895.4802354928003 0.0 -0.1515961222109219 -0.1515961222109219 0.0 0 0.0 0.0 0.0 0.0 + V 1.3806 + + 106 + 1 1.172 47742.2 1.0 9599 5589 15178 HBL1_DMSO_200M_050219_1,15190 HBL1_DMSO_200M_050219_1,15190,LLCDLPIQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15191 74.67 414.0 281780.0 25 0 32235.0 + -1 QAIGELESI 9 110 959.4470207097548 0 959.4451171755792 PEAK CID FTMS 0 0 0 15178 312221.1875 0.7066374743951122 4 -0.3032684326171875 13 ENST00000524792.5_1_11:108158320-108236232:+|nuORF;ENSG00000149311|ENST00000675843|ATM 3 {M(Oxidation (M))|F}{I|L}SQA{I|L}EG 8 -1 39.608 0.0 0.0 2.0663 0.0 0.0 829.3821262810346 239.1048372858032 1068.486963566838 0.0 0.0 0.0 0.0 0 0.0 0.0 1.075257498915995 1.024227503252014 {M(Oxidation (M))|F}{I|L}SQA{I|L}EG 2.0663 - 3954 + 1 1.172 80899.6 1.0 9600 5589 15178 HBL1_DMSO_200M_050219_1,15191 HBL1_DMSO_200M_050219_1,15191, False False QAIGELESI 74.670221 959.445117175579 742238.875 15178.0 ENST00000524792.5_1_11:108158320-108236232:+|nuORF;;ENSG00000149311|ENST00000675843|ATM 0.6209371089935303 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15192 74.673 119.0 1759900.0 25 0 114410.0 + 44083 YIYDEQGKLA 10 169 600.3013646138315 1198.588176294463 2 600.3008300662041 MULTI CID FTMS 0 0 0 15178 311083.71875 0.2955458746522065 -1 0.0270919799804687 14 Unmodified _YIYDEQGKLA_ REV__ENSG00000213160|ENST00000392647|KLHL23 27.628801355627647 0.3479284626772844 3 Y{I|L}YEDE 6 -1 65.553 0.0 0.0 5.4691 0.0 0.0 0.0 383.24152551822505 383.24152551822505 51.418183707215306 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.6307196863200843 0.0 Y{I|L}YEDE 5.4691 - 1673 + 1 1.172 153516.5 1.0 9601 5589 15178 HBL1_DMSO_200M_050219_1,15192 HBL1_DMSO_200M_050219_1,15192,YIYDEQGKLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15193 74.676 165.0 422170.0 25 0 74655.0 + 17109 KLFNGTFLKA 10 112 569.834842276257 0 569.8342773318291 PEAK CID FTMS 0 0 0 15178 269836.78125 0.5705045180698015 -1 0.0270919799804687 15 Unmodified _KLFNGTFLKA_ ENSG00000122674|ENST00000325974|CCZ1;ENSG00000146574|ENST00000316731|CCZ1B;ENST00000411858.1_1_7:6854458-6863725:-|nuORF 45.69961567697781 0.0726109246736577 3 {I|L}H 2 9 12.078 0.0 0.0 1.0617 0.0 0.0 217.14044178543708 667.3580416315061 884.4984834169431 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}H 1.0617 - 78 + 1 1.172 59468.7 1.0 9602 5589 15178 HBL1_DMSO_200M_050219_1,15193 HBL1_DMSO_200M_050219_1,15193,KLFNGTFLKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15194 74.681 275.0 365980.0 25 0 48163.0 -1 LAIIDLSL 8 134 450.2748616592415 898.535170385283 2 450.2745849490166 MULTI CID FTMS 0 0 0 15178 268080.21875 0.0173316327609227 16 -1.2173233032226562 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LAIIDLSL_ ENST00000395127.6_1_2:37376215-37376260:-|nuORF 2.577480529830294 0.808687252328423 3 V 1 -1 10.713 0.0 0.0 1.1923 0.0 0.0 781.455761671219 0.0 781.455761671219 0.0 -0.1241179186251617 -0.1241179186251617 0.0 0 0.0 0.0 0.0 0.0 V 1.1923 - 40 + 1 1.172 86461.8 1.0 9603 5589 15178 HBL1_DMSO_200M_050219_1,15194 HBL1_DMSO_200M_050219_1,15194,LAIIDLSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15195 74.692 542.0 685630.0 25 0 62028.0 42871 VVLRHLSI 8 178 468.8032746214821 935.591996309764 2 468.8033325076103 MULTI CID FTMS 0 0 0 15178 244507.96875 0.3576894835313224 -3 0.2706832885742187 17 Unmodified _VVLRHLSI_ ENSG00000074755|ENST00000381638|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;nc|ENSG00000074755|O43149-3|ZZEF1 24.67388899826682 0.525179942228231 3 {[TV]|[{I|L}S]}RH{I|L}VV{I|L} 8 4 + 55.078 0.0 0.0 5.8869 5.8869 90.871 0.0 0.0 0.0 9.652157369894852 30.71668351983881 9.652157369894852 27.070044816524508 0 0.8494850021680094 0.958607314841775 0.0 0.0 {[TV]|[{I|L}S]}RH{I|L}VV{I|L};[QP]P[RK]VV{I|L};[AG]PP[RK]VV{I|L} 5.8869;2.9936;2.9238 -;-;- 1680 1 1.172 280615.5 1.0 9604 5589 15178 HBL1_DMSO_200M_050219_1,15195 HBL1_DMSO_200M_050219_1,15195,VVLRHLSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15196 74.701 549.0 575930.0 25 0 115200.0 -1 CTYDTSENNYY 11 160 715.2613209702816 1428.5080890073632 2 715.2606078982353 MULTI CID FTMS 0 0 0 15178 241874.25 0.3858037343524698 -1 0.0270919799804687 18 Carbamidomethyl (C) _C(Carbamidomethyl (C))TYDTSENNYY_ nc|ENSG00000211816|A0A0B4J264|TRAV38-1 19.361941925380144 0.6323962752489956 3 YYDGDD{[QG]|[NA]}GNYY 12 -1 + 74.355 0.0 0.0 5.2051 5.2051 81.244 0.0 0.0 0.0 17.926740567922437 9.136890462689138 9.136890462689138 5.497512869428377 0 1.2302046884880935 2.0 2.078340932684427 0.0 YYDGDD{[QG]|[NA]}GNYY;YYD{[DS]|[MA]|[CV]|TT}DYYYY;YYD{[DS]|[MA]|[CV]|TT}YDYYY;YYD{[DS]|[MA]|[CV]|TT}YYDYY;YYD{[DS]|[MA]|[CV]|TT}YM{M(Oxidation (M))|F}YY;YYD{[DS]|[MA]|[CV]|TT}D[DP]NYY;YYD{[DS]|[MA]|[CV]|TT}D[NP]DYY;[YN]G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]S{[QG]|[NA]}GNYY;YYD{[DS]|[MA]|[CV]|TT}[HS]CNYY;{[YD]|[{M(Oxidation (M))|F}M]}YGY[HD]GNYY 5.2051;4.8203;4.5658;4.2149;4.2149;4.2135;4.0028;3.9502;3.8622;3.8115 -;-;-;-;-;-;-;-;-;- 6107 1 1.172 220630.3 1.0 9605 5589 15178 HBL1_DMSO_200M_050219_1,15196 HBL1_DMSO_200M_050219_1,15196,CTYDTSENNYY False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15197 74.704 130.0 864710.0 25 0 91193.0 + + 34076 SLLPTSPRL 9 131 492.2847878448055 982.5550227564112 2 492.2822143435478 MULTI CID FTMS 0 0 0 15178 217556.984375 0.5130651044683635 -1 0.0270919799804687 19 Unmodified _SLLFLFLM_ nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8 9.347437153973935 0.7675937258251505 3 {[CP]|[EA]}{I|L}PTS[RP]{I|L} 9 -1 + 29.233 0.0 0.0 2.9752 2.9752 70.223 0.0 0.0 0.0 7.041748524029025 2.408037477650641 2.408037477650641 1.9897000433601804 0 0.0 0.7695510786217261 0.0 0.4247425010840047 {[CP]|[EA]}{I|L}PTS[RP]{I|L};{[CP]|[EA]}{I|L}PT[RP]S{I|L};{[CP]|[EA]}{I|L}PT[RP]TV;{[CP]|[EA]}{I|L}PTE[KP]V;{[CP]|[EA]}{I|L}{I|L}[DG][RP]{I|L};{[CP]|[EA]}{I|L}PT{[SA]|[TG]}[VP]V;{[CP]|[EA]}{I|L}{[RE]|[WV]}[RP]{I|L};{[CP]|[EA]}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[VP]V 2.9752;2.7727;2.5935;2.3104;1.3733;1.0216;1.0203;0.78903 -;-;-;-;-;-;-;- 193 + 1 1.172 91242.8 1.0 9606 5589 15178 HBL1_DMSO_200M_050219_1,15197 HBL1_DMSO_200M_050219_1,15197,SLLFLFLM False False SLLPTSPRL 74.704011 492.282214343548 591663.5625 15178.0 nc|ENSG00000112983|Q9H0E9-3|BRD8;;nc|ENSG00000112983|Q9H0E9-2|BRD8;;nc|ENSG00000112983|Q9H0E9-4|BRD8 4.133718331654866 2.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15198 74.715 624.0 316230.0 25 0 25254.0 + 17183 KLLDDEQPLRL 11 171 670.383701517471 1338.7528501017418 2 670.3845703005791 MULTI CID FTMS 0 0 0 15178 185470.3125 0.6111849298203935 -1 0.0270919799804687 20 Unmodified _KLLDDEQPLRL_ ENSG00000068028|ENST00000359365|RASSF1;nc|ENSG00000068028|Q9NS23-3|RASSF1;nc|ENSG00000068028|Q9NS23-4|RASSF1;nc|ENSG00000068028|Q9NS23-5|RASSF1;nc|ENSG00000068028|Q9NS23|RASSF1 101.11556025712308 0.0008358102646557 3 K{I|L}{I|L}DDEQ[{I|L}P]R{I|L} 11 0 + 112.8 0.0 0.0 8.4255 8.4255 85.636 0.0 0.0 0.0 90.1797017654244 9.514323775719587 9.514323775719587 2.3459165064184617 0 3.721848749616356 0.8538719643217619 0.4247425010840047 0.75 + + K{I|L}{I|L}DDEQ[{I|L}P]R{I|L};K{I|L}{I|L}DDEQR[{I|L}P]{I|L};{I|L}K{I|L}DDEQ[{I|L}P]R{I|L};{I|L}K{I|L}DDEQR[{I|L}P]{I|L};K{I|L}{I|L}DDE[AG][{I|L}P]R{I|L};K{I|L}{I|L}DDE[AG]R[{I|L}P]{I|L};{I|L}K{I|L}DDE[AG][{I|L}P]R{I|L};K{I|L}{I|L}DDEQ[VG][{I|L}P]{I|L};K{I|L}{I|L}DDEQR{I|L}{I|L}P;{I|L}K{I|L}DDE[AG]R[{I|L}P]{I|L} 8.4255;8.2503;8.1115;7.9363;7.7436;7.5684;7.4297;7.3254;7.2995;7.2544 +;-;-;-;-;-;-;-;-;- + 2928 + 1 1.172 147738.0 1.0 9607 5589 15178 HBL1_DMSO_200M_050219_1,15198 HBL1_DMSO_200M_050219_1,15198,KLLDDEQPLRL True True KLLDDEQPLRL 74.714913 670.384570300579 2100877.0 15178.0 ENSG00000068028|ENST00000359365|RASSF1;;nc|ENSG00000068028|Q9NS23-5|RASSF1;;nc|ENSG00000068028|Q9NS23-4|RASSF1;;nc|ENSG00000068028|Q9NS23|RASSF1;;nc|ENSG00000068028|Q9NS23-3|RASSF1 7.418991565704346 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15200 74.719 42.0 1153200.0 25 0 219620.0 43642 YAMKVLRKVS 10 75 597.8561389632442 1193.6977249932884 2 597.8566161990166 MULTI CID FTMS 0 0 0 15199 2135805.5 0.8084849822351801 -2 0.1142120361328125 1 Unmodified _YAMKVLRKVS_ ENST00000525088.5_1_11:67196543-67197168:+|nuORF 1.6526216038709556 0.7189921496796233 3 M 1 9 10.089 0.0 0.0 0.84516 0.0 0.0 1044.6468654735602 0.0 1044.6468654735602 0.0 4.6040937697618745 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 0.84516 + + 5 + 1 1.174 40097.6 1.0 9608 5590 15199 HBL1_DMSO_200M_050219_1,15200 HBL1_DMSO_200M_050219_1,15200,YAMKVLRKVS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15201 74.721 53.0 1364300.0 25 0 220030.0 + 18664 LAIAPKLV 8 81 412.7839829502703 823.5534129673406 2 412.7837097048759 MULTI CID FTMS 0 0 0 15199 1072429.75 0.1184424160964123 -4 0.3578033447265625 2 Unmodified _LAIAPKLV_ REV__ENSG00000151150|ENST00000280772|ANK3 46.92087301778293 0.1537303740847981 3 [{I|L}A]PKA{I|L}{I|L}V 8 -1 + 77.868 0.0 0.0 9.4551 9.4551 90.641 0.0 0.0 0.0 5.172203223519531 5.172203223519531 5.172203223519531 5.172203223519531 0 1.575257498915995 2.0 0.0 0.0 [{I|L}A]PKA{I|L}{I|L}V;[{I|L}A]P{I|L}AK{I|L}V;[{I|L}A]P{I|L}AKV{I|L};[{I|L}A]KPA{I|L}{I|L}V;[{I|L}P]AKA{I|L}{I|L}V;[{I|L}A]P{I|L}A{I|L}KV;[{I|L}A]{I|L}PAK{I|L}V;[{I|L}A]P{I|L}{I|L}AKV;[{I|L}A]PKVVVV;[{I|L}A]{I|L}PAKV{I|L} 9.4551;8.8271;8.0425;7.9945;7.9031;7.8497;7.5593;7.4842;7.1489;6.7748 -;-;-;-;-;-;-;-;-;- 377 1 1.174 60570.5 1.0 9609 5590 15199 HBL1_DMSO_200M_050219_1,15201 HBL1_DMSO_200M_050219_1,15201,LAIAPKLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15202 74.722 5.7 7187300.0 25 0 961430.0 + 43554 WYLSPFAL 8 82 498.76172176745 995.5088906017 2 498.7615539431572 MULTI CID FTMS 0 0 0 15199 5025692.5 0.8800039607854226 -2 0.1142120361328125 3 Unmodified _WYLSPFAL_ REV__ENSG00000159459|ENST00000290650|UBR1 20.871210003555333 0.6025813472596342 3 VPN{I|L} 4 -1 24.863 0.0 0.0 2.4975 0.0 0.0 554.2473377225969 0.0 554.2473377225969 0.0 4.511013430302743 0.0 0.0 0 0.0 0.0 0.0 0.5891368308784531 VPN{I|L} 2.4975 - 184 + 1 1.174 36640.7 1.0 9610 5590 15199 HBL1_DMSO_200M_050219_1,15202 HBL1_DMSO_200M_050219_1,15202,WYLSPFAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15203 74.723 13.0 5077700.0 25 0 294030.0 + 18208 KVFDPVPVGV 10 96 528.8083175247289 1055.6020821162576 2 528.8081542849541 MULTI CID FTMS 0 0 0 15199 3087363.25 0.3819986410763051 -2 0.1142120361328125 4 Unmodified _KVFDPVPVGV_ ENSG00000135829|ENST00000367549|DHX9;ENST00000490519.1_1_1:182845328-182845691:+|nuORF 26.268140514670165 0.3785003716575977 3 [EP]NNM{I|L} 6 9 37.246 0.0 0.0 3.5284 0.0 0.0 0.0 354.2741558868549 354.2741558868549 2.8164101189933035 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.9876954943324544 [EP]NNM{I|L} 3.5284 - 298 1 1.174 58071.8 1.0 9611 5590 15199 HBL1_DMSO_200M_050219_1,15203 HBL1_DMSO_200M_050219_1,15203,KVFDPVPVGV False True KVFDPVPVGV 74.723123 528.808154284954 127564160.0 15199.0 ENST00000490519.1_1_1:182845328-182845691:+|nuORF;;ENSG00000135829|ENST00000367549|DHX9 6.59313456217448 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15204 74.725 104.0 925600.0 25 0 64177.0 28420 PSVSQRILRR 10 104 606.3695885146241 1210.724624096048 2 606.3698608279228 MULTI CID FTMS 0 0 0 15199 1277460.5 0.509842814890305 -5 0.4153594970703125 5 Unmodified _PSVSQRILRR_ ENSG00000149527|ENST00000378486|PLCH2;ENST00000343889.8_1_1:2411150-2434522:+|nuORF;ENST00000462379.1_1_1:2430086-2435063:+|nuORF;ENST00000473964.5_1_1:2433496-2434522:+|nuORF;nc|ENSG00000149527|O75038-2|PLCH2;nc|ENSG00000149527|O75038-3|PLCH2;nc|ENSG00000149527|O75038-4|PLCH2;nc|ENSG00000149527|O75038-5|PLCH2 3.5964929083625545 0.7100006075494749 3 [PS]N 3 8 16.655 0.0 0.0 1.3757 0.0 0.0 0.0 909.5694404602596 909.5694404602596 2.600906146684922 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [PS]N 1.3757 - 92 1 1.174 72376.7 1.0 9612 5590 15199 HBL1_DMSO_200M_050219_1,15204 HBL1_DMSO_200M_050219_1,15204,PSVSQRILRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15205 74.727 56.0 1264500.0 25 0 224760.0 + 38808 TVFEGRIYV 9 93 542.2951443569837 1082.5757357807672 2 542.2957031130791 MULTI CID FTMS 0 0 0 15199 897083.8125 1.0 0 0.0 6 Unmodified _TVFEGRIYV_ ENSG00000114648|ENST00000232766|KLHL18;nc|ENSG00000114648|O94889-2|KLHL18 19.256988751693697 0.3154191944385105 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}E 4 5 43.698 0.0 0.0 4.0365 0.0 0.0 0.0 603.3277822870352 603.3277822870352 17.5 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3252574989159953 0.0 + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}E 4.0365 + + 103 + 1 1.174 60776.6 1.0 9613 5590 15199 HBL1_DMSO_200M_050219_1,15205 HBL1_DMSO_200M_050219_1,15205,TVFEGRIYV False True TVFEGRIYV 74.726781 542.295703113079 5868055.5 15199.0 nc|ENSG00000114648|O94889-2|KLHL18;;ENSG00000114648|ENST00000232766|KLHL18 3.449622193972269 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15206 74.733 328.0 836000.0 25 0 103010.0 + 45736 YYIDCIRQV 9 176 586.7925366124595 1171.5705202917188 2 586.7923461794853 MULTI CID FTMS 0 0 0 15199 597385.4375 0.5164594110952649 -2 0.1142120361328125 7 Unmodified _YYIDCIRQV_ ENSG00000169710|ENST00000306749|FASN 99.79894945604345 0.0109923542231827 3 YY{I|L}DC{I|L}RN{I|L} 9 2 + 102.95 0.0 0.0 8.7875 8.7875 83.21 0.0 0.0 0.0 34.97302484056647 0.5799194697768542 0.5799194697768542 0.5799194697768542 0 0.7134679910804405 2.0 0.5501648626366046 2.142159058960253 YY{I|L}DC{I|L}RN{I|L};YY{I|L}DC{I|L}RQV;YYVEC{I|L}RN{I|L};YY{I|L}DC{I|L}RAGV;YYVEC{I|L}RQV;YY{I|L}DC{I|L}RGG{I|L};YYVEC{I|L}RAGV;YYVEC{I|L}RGG{I|L};YY{I|L}V[EC]RN{I|L};YY{I|L}V[EC]RQV 8.7875;8.738;8.2574;8.247;8.2079;7.7239;7.717;7.1938;6.353;6.3035 -;+;-;-;-;-;-;-;-;- + 7293 + 1 1.174 204333.7 1.0 9614 5590 15199 HBL1_DMSO_200M_050219_1,15206 HBL1_DMSO_200M_050219_1,15206,YYIDCIRQV True True YYIDCIRQV 74.732752 586.792346179485 9311881.0 15199.0 ENSG00000169710|ENST00000306749|FASN 6.140614191691081 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15207 74.734 40.0 617400.0 25 0 42249.0 + -1 DLCSPPCPPVL 11 59 627.796699929451 1253.578846925702 2 627.7964965701103 MULTI CID FTMS 0 0 0 15199 522805.5625 0.2661884841865076 -3 0.2322463989257812 8 2 Carbamidomethyl (C) _DLC(Carbamidomethyl (C))SPPC(Carbamidomethyl (C))PPVL_ REV__nc|ENSG00000197558|A2VEC9|SSPOP 5.731851221503515 0.8481046878870278 3 GAQV{I|L} 5 -1 27.263 0.0 0.0 2.1748 0.0 0.0 767.3001576154312 0.0 767.3001576154312 0.0 11.689615513722202 0.0 0.0 0 0.5044321917401079 0.0 0.0 0.0 GAQV{I|L} 2.1748 - 30 1 1.174 25304.8 1.0 9615 5590 15199 HBL1_DMSO_200M_050219_1,15207 HBL1_DMSO_200M_050219_1,15207,DLCSPPCPPVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15208 74.736 80.0 619740.0 25 0 76547.0 + 28436 PTAPAPLLSV 10 72 483.2875717275298 964.5605905218596 2 483.2876464724541 MULTI CID FTMS 0 0 0 15199 478462.09375 0.8921379128868321 2 -0.1643600463867187 9 Unmodified _PTAPAPLLSV_ ENST00000435504.8_1_2:25962949-25963207:-|nuORF 25.399314129420983 0.3980215340001851 3 [VS][YV][KA]{I|L}SV 9 6 + 25.62 0.0 0.0 2.6561 2.6561 81.656 0.0 0.0 0.0 1.922262144776358 8.0842309438912 1.922262144776358 25.62014972766029 0 0.7742275032520141 1.3979400086720375 0.3494850021680094 0.0 [VS][YV][KA]{I|L}SV 2.6561 - 84 1 1.174 48783.1 1.0 9616 5590 15199 HBL1_DMSO_200M_050219_1,15208 HBL1_DMSO_200M_050219_1,15208,PTAPAPLLSV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15209 74.738 94.0 615490.0 25 0 68462.0 + 21150 LPASIPHVI 9 89 473.7894221792616 945.5642914253232 2 473.7897521853447 MULTI CID FTMS 0 0 0 15199 437944.5625 0.0576923577260405 -7 0.6230926513671875 10 Unmodified _LPASIPHVI_ ENSG00000113812|ENST00000335754|ACTR8 60.38955033654506 0.025866396858536 3 {I|L}P 2 7 41.454 0.0 0.0 4.384 0.0 0.0 0.0 732.4047335260374 732.4047335260374 19.554687406276017 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}P 4.384 + + 243 + 1 1.174 48200.7 1.0 9617 5590 15199 HBL1_DMSO_200M_050219_1,15209 HBL1_DMSO_200M_050219_1,15209,LPASIPHVI True True LPASIPHVI 74.737781 473.789752185345 65593472.0 15199.0 ENSG00000113812|ENST00000335754|ACTR8 1.458230177561442 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15210 74.745 389.0 356680.0 25 0 58231.0 -1 MGESMCIMCEY 11 144 729.7393104953811 1457.464068057562 2 729.7369872927666 MULTI CID FTMS 0 0 0 15199 405398.1875 1.0 0 0.0 11 2 Carbamidomethyl (C),3 Oxidation (M) _M(Oxidation (M))GESM(Oxidation (M))C(Carbamidomethyl (C))IM(Oxidation (M))C(Carbamidomethyl (C))EY_ ENST00000460683.1_2_3:122447229-122447304:+|nuORF 0.3506318815782774 0.8734936314171269 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}ES 5 -1 27.792 0.0 0.0 1.9069 0.0 0.0 0.0 857.1967090089871 857.1967090089871 8.947340481202062 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}ES 1.9069 - 472 1 1.174 101595.6 1.0 9618 5590 15199 HBL1_DMSO_200M_050219_1,15210 HBL1_DMSO_200M_050219_1,15210,MGESMCIMCEY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15211 74.746 49.0 698380.0 25 0 87474.0 + 2237 AQDWPATSL 9 76 494.740467885564 987.466382837928 2 494.7395202517509 MULTI CID FTMS 0 0 0 15199 351566.78125 0.7245883985471052 5 -0.457733154296875 12 Unmodified _AQDWPATSL_ ENSG00000132300|ENST00000254630|PTCD3;ENST00000469585.5_1_2:86355098-86362111:+|nuORF;ENST00000477520.1_1_2:86360551-86362111:+|nuORF;ENST00000487043.5_1_2:86355098-86363686:+|nuORF;nc|ENSG00000132300|Q96EY7-2|PTCD3 26.88365393820708 0.1891292719743517 3 S{I|L} 2 7 20.355 0.0 0.0 2.0614 0.0 0.0 769.3391683377313 0.0 769.3391683377313 0.0 3.877143641658808 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 + S{I|L} 2.0614 + + 52 + 1 1.174 35573.9 1.0 9619 5590 15199 HBL1_DMSO_200M_050219_1,15211 HBL1_DMSO_200M_050219_1,15211,AQDWPATSL False True AQDWPATSL 74.746052 494.739520251751 7043305.0 15199.0 nc|ENSG00000132300|Q96EY7-2|PTCD3;;ENST00000477520.1_1_2:86360551-86362111:+|nuORF;;ENST00000487043.5_1_2:86355098-86363686:+|nuORF;;ENST00000469585.5_1_2:86355098-86362111:+|nuORF;;ENSG00000132300|ENST00000254630|PTCD3 5.526613235473633 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15212 74.753 411.0 312770.0 25 0 48675.0 -1 0 144 673.4131631284841 672.4058866618841 1 673.4127075076103 MULTI CID FTMS 0 0 0 15199 344194.09375 0.3881296140605241 3 -0.2161483764648437 13 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}VT{I|L} 6 -1 + 75.635 0.0 0.0 11.248 11.248 92.895 0.0 0.0 0.0 13.406206186877938 16.197887582883936 13.406206186877938 6.989700043360188 0 1.2728787452803376 1.6989700043360187 0.75 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}TV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}S{I|L}{I|L};[{I|L}V]EVT{I|L};{[QN]|[E{I|L}]|[KN]}VVT{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}T{I|L};[{I|L}V]ETV{I|L};[{I|L}V]ES{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}VTV{I|L};{[QN]|[E{I|L}]|[KN]}VS{I|L}{I|L} 11.248;10.209;10.159;9.2546;9.1037;8.7793;8.2151;8.1648;8.0642;8.0139 -;-;-;-;-;-;-;-;-;- 544 1 1.174 95275.2 1.0 9620 5590 15199 HBL1_DMSO_200M_050219_1,15212 HBL1_DMSO_200M_050219_1,15212, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15213 74.763 518.0 174600.0 25 0 37087.0 -1 0 62 1162.797886063532 3485.371828790796 3 1163.461352527142 MULTI CID FTMS 0 0 0 15199 328015.0625 0.0028179440092333 31 -2.367103576660156 14 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20054 0.0 0.0 1310.4804236167708 2024.8045776283284 3335.285001245099 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20054 - 23 + 1 1.174 76797.6 1.0 9621 5590 15199 HBL1_DMSO_200M_050219_1,15213 HBL1_DMSO_200M_050219_1,15213, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15214 74.771 463.0 470240.0 25 0 98746.0 + -1 QMCMWCMDKGR 11 145 788.7970778262481 1575.5796027192962 2 789.2994872927666 MULTI CID FTMS 0 0 0 15199 281417.3125 0.5682187820694995 3 -0.2161483764648437 15 Acetyl (Protein N-term),2 Carbamidomethyl (C),2 Oxidation (M) _(Acetyl (Protein N-term))QM(Oxidation (M))C(Carbamidomethyl (C))M(Oxidation (M))WC(Carbamidomethyl (C))MDKGR_ REV__chr2:11868223-12007747|13|16.0|0.0|14.12|+|1|TE_info:MLT1H,MLT1H_dup763,ERVL-MaLR,LTR,donor,-,11867898,11868223|None,MIR3681HG|4 0.3506318815782774 0.8734936314171269 3 YYYD{[QD]|[EN]|[WG]|[KD]|[RS]}S 7 -1 48.631 0.0 0.0 3.0866 0.0 0.0 0.0 638.1846407525999 638.1846407525999 14.087031803339729 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.055462187404089 0.0 YYYD{[QD]|[EN]|[WG]|[KD]|[RS]}S 3.0866 - 1955 + 1 1.174 151773.9 1.0 9622 5590 15199 HBL1_DMSO_200M_050219_1,15214 HBL1_DMSO_200M_050219_1,15214,QMCMWCMDKGR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15215 74.774 137.0 572280.0 25 0 62092.0 -1 0 92 938.4345346034208 1874.8545162736416 2 938.4333373904228 MULTI CID FTMS 0 0 0 15199 278359.84375 0.4667213929216914 -2 0.1142120361328125 16 3 [{I|L}V][C(Carbamidomethyl (C))N]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))N]NA{M(Oxidation (M))|F}YQ 12 -1 43.809 0.0 0.0 2.3367 0.0 0.0 0.0 341.174969950252 341.174969950252 29.204868851976546 0.0 0.0 0.0 0 0.3252574989159953 1.0969100130080565 0.0 0.8494850021680094 [{I|L}V][C(Carbamidomethyl (C))N]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))N]NA{M(Oxidation (M))|F}YQ 2.3367 - 2152 1 1.174 53670.5 1.0 9623 5590 15199 HBL1_DMSO_200M_050219_1,15215 HBL1_DMSO_200M_050219_1,15215, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15216 74.782 452.0 195340.0 25 0 12428.0 -1 0 146 594.1560872369876 593.1488107703875 1 594.3149902224541 MULTI CID FTMS 0 0 0 -1 0 17 3 S{I|L} 2 -1 15.664 0.0 0.0 2.6408 0.0 0.0 375.0216573053469 0.0 375.0216573053469 0.0 4.404664466509551 0.0 0.0 0 0.0 0.0 0.1595680409956017 0.0 S{I|L} 2.6408 - 61 + 1 1.174 69653.0 1.0 9624 5590 15199 HBL1_DMSO_200M_050219_1,15216 HBL1_DMSO_200M_050219_1,15216, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15217 74.791 458.0 189820.0 25 0 22351.0 -1 0 137 647.5465395583117 0 647.4103881716728 PEAK CID FTMS 0 0 0 -1 0 18 3 {I|L}{I|L} 2 -1 9.068 0.0 0.0 0.70128 0.0 0.0 646.7347894664296 417.15107141666255 1063.8858608830922 0.0 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.0 {I|L}{I|L} 0.70128 - 80 + 1 1.174 70140.8 1.0 9625 5590 15199 HBL1_DMSO_200M_050219_1,15217 HBL1_DMSO_200M_050219_1,15217, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15218 74.801 553.0 209640.0 25 0 47286.0 34440 SLWSLSSAV 9 90 949.499322618239 948.492046151639 1 949.5024291872978 MULTI CID FTMS 0 0 0 15199 180373.640625 0.0375096991767039 -7 0.6230926513671875 19 Unmodified _SLWSLSSAV_ ENSG00000126883|ENST00000359428|NUP214;ENST00000525980.5_1_9:134025776-134070755:+|nuORF;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214 34.10243960390752 0.1078313939113124 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PT{I|L}SSAV 9 4 + 67.599 0.0 0.0 7.127 7.127 81.218 0.0 0.0 0.0 7.147642715192504 42.76318867467667 7.147642715192504 1.2763625255165325 0 0.0 0.0 1.5994850021680094 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PT{I|L}SSAV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}TSSAV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PT{I|L}SSG{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}TSSG{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PT{I|L}SGTV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}TSGTV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PT{I|L}SSVA;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PTVTSAV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}TSSVA;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PT{I|L}SGS{I|L} 7.127;6.9924;6.7044;6.5699;6.1761;6.0416;5.9422;5.8588;5.8077;5.7536 -;-;-;-;-;-;-;-;-;- 1485 1 1.174 80337.4 1.0 9626 5590 15199 HBL1_DMSO_200M_050219_1,15218 HBL1_DMSO_200M_050219_1,15218,SLWSLSSAV True False TPFQISSAV 74.800679 949.502429187298 32538046.0 15199.0 ENSG00000196453|ENST00000247930|ZNF777 2.64412252108256 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15219 74.81 527.0 169500.0 25 0 10873.0 + 11992 GPFRRKNLRR 10 151 650.3975097537041 0 650.3975097537041 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _GPFRRKNLRR_ REV__ENSG00000149091|ENST00000456247|DGKZ;REV__nc|ENSG00000149091|Q13574-4|DGKZ;REV__nc|ENSG00000149091|Q13574-5|DGKZ;REV__nc|ENSG00000149091|Q13574-6|DGKZ 6.723162845929126 0.3961065659209837 3 VAMVE 5 -1 15.648 0.0 0.0 1.2048 0.0 0.0 666.4714588611206 100.02324854068593 766.4947074018065 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 VAMVE 1.2048 - 132 + 1 1.174 69979.7 1.0 9627 5590 15199 HBL1_DMSO_200M_050219_1,15219 HBL1_DMSO_200M_050219_1,15219,GPFRRKNLRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15221 74.814 7.5 3819900.0 25 0 1084500.0 + 45927 YYDGDIGNYYY 11 49 703.2827151770417 1404.5508774208834 2 703.2834350466728 MULTI CID FTMS 0 0 0 15220 3144718.0 0.3037100177471407 1 -0.0692672729492187 1 Unmodified _YYYDGDIGNYY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 14.838274106304384 0.7264935675211688 3 YYD 3 8 25.062 0.0 0.0 1.7843 0.0 0.0 0.0 960.3731484992614 960.3731484992614 8.608018480247779 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + YYD 1.7843 + + 29 1 1.174 30539.0 1.0 9628 5591 15220 HBL1_DMSO_200M_050219_1,15221 HBL1_DMSO_200M_050219_1,15221,YYYDGDIGNYY False True YYDGDIGNYYY 74.81422 703.283435046673 63995592.0 15220.0 ENSG00000196591|ENST00000519065|HDAC2;;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 5.151537577311198 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15222 74.816 62.0 1137300.0 25 0 128120.0 -1 0 85 368.71587828822254 735.4172036432451 2 368.7155639529228 MULTI CID FTMS 0 0 0 15220 306797.53125 0.1531698915146043 1 -0.0692672729492187 2 3 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}K{I|L} 6 -1 + 31.956 0.0 0.0 4.3452 4.3452 72.109 0.0 0.0 0.0 6.478174818886373 1.1394335230683694 1.1394335230683694 1.1394335230683694 0 0.3807196863200844 0.0 0.0 0.2742275032520141 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}K{I|L};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}{I|L}K;{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}K{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}{I|L}K 4.3452;4.1903;3.8041;3.6492 -;-;-;- 67 + 1 1.174 62885.3 1.0 9629 5591 15220 HBL1_DMSO_200M_050219_1,15222 HBL1_DMSO_200M_050219_1,15222, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15223 74.817 42.0 1678400.0 25 0 277050.0 23048 LSLASNPEL 9 90 472.258785161171 942.503017389142 2 472.2580139040947 MULTI CID FTMS 0 0 0 15220 469181.5625 0.0134297293711594 -6 0.5104522705078125 3 Unmodified _LSLASNPEL_ ENSG00000117650|ENST00000366999|NEK2 32.30548876998284 0.1201446275138228 3 [EP]{I|L}D{I|L} 5 7 32.976 0.0 0.0 3.4988 0.0 0.0 0.0 372.1752335358795 372.1752335358795 5.197180143148614 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3054621874040891 0.0 [EP]{I|L}D{I|L} 3.4988 - 251 1 1.174 60148.9 1.0 9630 5591 15220 HBL1_DMSO_200M_050219_1,15223 HBL1_DMSO_200M_050219_1,15223,LSLASNPEL True True GSIQSIPEI 74.816914 472.258013904095 244693392.0 15220.0 ENSG00000167325|ENST00000300738|RRM1 0.5091242790222168 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15224 74.818 48.0 1426200.0 25 0 313340.0 + 45720 YYFDYKEQL 9 71 634.7953867901278 1267.5762206470556 2 634.7954589724541 MULTI CID FTMS 0 0 0 15220 433472.09375 0.1355871210373598 -3 0.2093048095703125 4 Unmodified _YYFDYKEQL_ ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF 45.69961567697781 0.0497987121815769 3 YY{M(Oxidation (M))|F}DYKEQ{I|L} 9 0 + 66.335 0.0 0.0 5.2332 5.2332 86.762 0.0 0.0 0.0 32.5744823917088 11.303160214857035 11.303160214857035 12.262809413564632 0 0.4247425010840047 2.0 0.3807196863200844 0.7302046884880937 + + YY{M(Oxidation (M))|F}DYKEQ{I|L};YY{M(Oxidation (M))|F}DYKE[AG]{I|L};YY{M(Oxidation (M))|F}D[WP][HK]{I|L};YY{M(Oxidation (M))|F}C(Carbamidomethyl (C))[HT][HK]{I|L} 5.2332;4.2658;2.5847;2.0333 +;-;-;- + 514 + 1 1.174 58058.6 1.0 9631 5591 15220 HBL1_DMSO_200M_050219_1,15224 HBL1_DMSO_200M_050219_1,15224,YYFDYKEQL True True YYFDYKEQL 74.818216 634.795458972454 99794952.0 15220.0 ENSG00000099341|ENST00000215071|PSMD8;;ENST00000592001.5_1_19:38865430-38871817:+|nuORF 6.175783634185791 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15225 74.82 63.0 528570.0 25 0 56133.0 + 24710 MPALAPPEV 9 62 462.74665165214685 923.4787503710936 2 462.7464782595634 MULTI CID FTMS 0 0 0 15220 384771.34375 0.2036464688318109 2 -0.1210556030273437 5 Unmodified _MPALAPPEV_ ENSG00000132341|ENST00000543796|RAN;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 18.13498045792455 0.3457906370836843 3 PMA 3 7 18.984 0.0 0.0 2.0558 0.0 0.0 343.1751137517562 278.1511629693969 621.3262767211531 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 PMA 2.0558 - 23 + 1 1.174 33253.7 1.0 9632 5591 15220 HBL1_DMSO_200M_050219_1,15225 HBL1_DMSO_200M_050219_1,15225,MPALAPPEV False True MPALAPPEV 74.819747 462.746478259563 20569960.0 15220.0 ENST00000455094.1_1_6:30454046-30454364:+|nuORF;;ENSG00000132341|ENST00000543796|RAN -0.1255473544200261 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15226 74.821 27.0 1488200.0 25 0 216380.0 + 25240 MVMETIEKI 9 69 547.2859283165991 1092.557303699998 2 547.2861816287041 MULTI CID FTMS 0 0 0 15220 288011.9375 0.1474014250644838 -1 0.0950927734375 6 Unmodified _MVMETIEKI_ ENSG00000115524|ENST00000335508|SF3B1 21.53697664764585 0.2571576504437394 3 {[ET]|[MV]}ME[{I|L}T]EK{I|L} 9 0 + 29.076 0.0 0.0 2.6613 2.6613 81.672 0.0 0.0 0.0 15.787268505095048 8.63044968430011 8.63044968430011 25.885993037226743 0 0.4247425010840047 0.0 0.4247425010840047 0.0 + + {[ET]|[MV]}ME[{I|L}T]EK{I|L};{[ET]|[MV]}{I|L}[RH][HV]{[DS]|[MA]|[CV]|TT} 2.6613;0.29195 +;- + 73 + 1 1.174 39024.7 1.0 9633 5591 15220 HBL1_DMSO_200M_050219_1,15226 HBL1_DMSO_200M_050219_1,15226,MVMETIEKI False True MVMETIEKI 74.820927 547.2869 13707578.0 15220.0 ENSG00000115524|ENST00000335508|SF3B1 5.97947883605957 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15227 74.825 221.0 442620.0 25 0 42833.0 + 38161 TPPSPSPVSV 10 130 484.25839615362605 966.502239374052 2 484.2584411501884 MULTI CID FTMS 0 0 0 15220 186148.015625 0.0004398460207898 96 -6.9910888671875 7 Unmodified _TPPSPSPVSV_ REV__ENST00000451091.2_1_1:40041668-40042359:-|nuORF 20.453626601364224 0.5043500229302764 3 {M(Oxidation (M))|F}CTV 4 -1 25.821 0.0 0.0 2.6715 0.0 0.0 498.31228073323024 0.0 498.31228073323024 0.0 10.715015081541209 0.0 0.0 0 0.0 0.0 0.555462187404089 0.0 {M(Oxidation (M))|F}CTV 2.6715 - 292 + 1 1.174 79162.9 1.0 9634 5591 15220 HBL1_DMSO_200M_050219_1,15227 HBL1_DMSO_200M_050219_1,15227,TPPSPSPVSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15228 74.831 348.0 635880.0 25 0 116670.0 + + -1 TALAADFRV 9 146 481.8396752606496 1442.497196382149 3 481.8401367068291 MULTI CID FTMS 0 0 0 15220 177192.390625 0.5041067115555228 1 -0.0692672729492187 8 3 Carbamidomethyl (C) _EC(Carbamidomethyl (C))MC(Carbamidomethyl (C))LC(Carbamidomethyl (C))MCTHV_ ENSG00000076382|ENST00000321765|SPAG5 2.843284757254958 0.8617331327080043 3 YYYYD 5 -1 65.397 0.0 0.0 4.5336 0.0 0.0 0.0 672.1942843072874 672.1942843072874 52.478838161201686 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.9947026752325154 0.0 YYYYD 4.5336 - 477 + 1 1.174 173495.0 1.0 9635 5591 15220 HBL1_DMSO_200M_050219_1,15228 HBL1_DMSO_200M_050219_1,15228,ECMCLCMCTHV False False TALAADFRV 74.831366 481.840136706829 284963.96875 15220.0 ENSG00000076382|ENST00000321765|SPAG5 2.272712071736654 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15229 74.834 103.0 759060.0 25 0 131280.0 14991 ILRMERII 8 75 348.5503130886796 1042.6291098662389 3 348.5499450564384 MULTI CID FTMS 0 0 0 15220 159997.234375 0.0207442846563089 6 -0.4434356689453125 9 Unmodified _ILRMERII_ ENSG00000118816|ENST00000237654|CCNI;nc|ENSG00000118816|Q14094-2|CCNI 17.11289562659939 0.6581031263288403 3 {I|L}{I|L}E 3 5 26.198 0.0 0.0 2.5127 0.0 0.0 0.0 684.3956158390282 684.3956158390282 13.723637474483468 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}E 2.5127 - 31 + 1 1.174 70492.7 1.0 9636 5591 15220 HBL1_DMSO_200M_050219_1,15229 HBL1_DMSO_200M_050219_1,15229,ILRMERII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15230 74.845 645.0 564390.0 25 0 74457.0 -1 QMRCCCCCRVC 11 154 796.7801207743984 1591.5456886155966 2 796.7806274294853 MULTI CID FTMS 0 0 0 15220 159079.71875 0.222520686282678 4 -0.362640380859375 10 5 Carbamidomethyl (C) _QMRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))RVC_ ENSG00000157765|ENST00000382051|SLC34A2;nc|ENSG00000157765|O95436-2|SLC34A2 0.3070304955306653 0.8736993455979228 3 YYYDY 5 -1 68.315 0.0 0.0 4.2924 0.0 0.0 0.0 821.2427967638339 821.2427967638339 15.628012370588706 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.2614393726401687 0.0 YYYDY 4.2924 - 3838 + 1 1.174 248607.9 1.0 9637 5591 15220 HBL1_DMSO_200M_050219_1,15230 HBL1_DMSO_200M_050219_1,15230,QMRCCCCCRVC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15231 74.846 65.0 752870.0 25 0 74858.0 + 12453 GTYTGFIKV 9 80 493.2717199318526 984.5288869305052 2 493.2715637087822 MULTI CID FTMS 0 0 0 15220 140136.1875 0.0302302813451395 -3 0.2093048095703125 11 Unmodified _GTYTGFIKV_ ENSG00000266094|ENST00000579436|RASSF5;nc|ENSG00000266094|Q8WWW0-2|RASSF5;nc|ENSG00000266094|Q8WWW0-3|RASSF5 27.628801355627647 0.1796483985696185 3 {[SA]|[TG]}YT 4 5 36.484 0.0 0.0 3.7058 0.0 0.0 0.0 559.3260360980182 559.3260360980182 19.829022044314467 0.0 0.0 0.0 0 0.6307196863200843 1.3979400086720375 0.0 0.0 + {[SA]|[TG]}YT 3.7058 + + 166 + 1 1.174 42318.7 1.0 9638 5591 15220 HBL1_DMSO_200M_050219_1,15231 HBL1_DMSO_200M_050219_1,15231,GTYTGFIKV False True GTYTGFIKV 74.846399 493.271563708782 89311368.0 15220.0 nc|ENSG00000266094|Q8WWW0-2|RASSF5;;nc|ENSG00000266094|Q8WWW0-3|RASSF5;;ENSG00000266094|ENST00000579436|RASSF5 5.970640182495117 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15232 74.85 176.0 353900.0 25 0 70894.0 + 24049 LWNCSDWCCHY 11 90 477.177044476968 1428.509304031104 3 477.1771118044853 MULTI CID FTMS 0 0 0 15220 140660.859375 0.3161216994246787 -1 0.0950927734375 12 Unmodified _LWNCSDWCCHY_ REV__ENST00000488388.2_1_10:60036880-60036955:+|nuORF 1.4819007175156935 0.86815623132643 3 YYT 3 -1 22.932 0.0 0.0 1.6053 0.0 0.0 0.0 998.3037735958102 998.3037735958102 5.99485002168009 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 YYT 1.6053 - 112 1 1.174 57853.3 1.0 9639 5591 15220 HBL1_DMSO_200M_050219_1,15232 HBL1_DMSO_200M_050219_1,15232,LWNCSDWCCHY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15233 74.852 105.0 702520.0 25 0 61858.0 11709 GLGQAFPQV 9 116 458.7494672821346 915.4843816310693 2 458.7498046755791 MULTI CID FTMS 0 0 0 15220 134298.75 0.1197518759054062 3 -0.237030029296875 13 Unmodified _GLGQAFPQV_ ENST00000466521.5_1_16:30127991-30128572:-|nuORF 24.67388899826682 0.2172451872415813 3 [{I|L}P]HP{I|L}E[NP] 8 7 + 21.546 0.0 0.0 2.3536 2.3536 72.563 0.0 0.0 0.0 3.341957328052594 2.502728537128732 2.502728537128732 4.202164033831895 0 0.0 1.0969100130080565 0.0 0.0 [{I|L}P]HP{I|L}E[NP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P{I|L}E[NP];[QT]ERRQV;[QT]ERRN{I|L};{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}{[NV]|[RG]}QV;{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}{[NV]|[RG]}N{I|L};{[QN]|[E{I|L}]|[KN]}[QT]PC{I|L}{I|L};{[VA]|[{I|L}G]}[KC]A[{I|L}T][NP];[QT]ERR[AG]V;[QT]ERRGG{I|L} 2.3536;1.8945;1.7712;1.698;1.0808;1.0077;0.70596;0.56148;0.20582;0.13269 -;-;-;-;-;-;-;-;-;- 299 1 1.174 59659.5 1.0 9640 5591 15220 HBL1_DMSO_200M_050219_1,15233 HBL1_DMSO_200M_050219_1,15233,GLGQAFPQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15234 74.864 681.0 114060.0 25 0 21918.0 -1 0 120 804.2637817263603 0 804.2637817263603 PEAK CID FTMS 0 0 0 -1 0 14 3 Y[NG]VD 5 -1 10.802 0.0 0.0 0.67239 0.0 0.0 343.1282336896498 712.1395968072874 1055.2678304969372 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 Y[NG]VD 0.67239 - 75 + 1 1.174 58330.7 1.0 9641 5591 15220 HBL1_DMSO_200M_050219_1,15234 HBL1_DMSO_200M_050219_1,15234, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15235 74.866 77.0 1465000.0 25 0 146010.0 38766 TVDFYFEEV 9 114 574.7592916255289 1147.5040303178578 2 574.7597534060478 MULTI CID FTMS 0 0 0 15220 104473.1953125 0.1223495952680718 -6 0.5104522705078125 15 Unmodified _TVDFYFEEV_ ENSG00000196353|ENST00000429747|CPNE4;nc|ENSG00000196353|Q96A23-2|CPNE4 11.640296217721598 0.521594087909532 3 {[TV]|[{I|L}S]}T{I|L}C(Carbamidomethyl (C)) 5 7 19.614 0.0 0.0 1.7093 0.0 0.0 0.0 570.2035902145952 570.2035902145952 7.395775165767876 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 {[TV]|[{I|L}S]}T{I|L}C(Carbamidomethyl (C)) 1.7093 - 132 1 1.174 91381.6 1.0 9642 5591 15220 HBL1_DMSO_200M_050219_1,15235 HBL1_DMSO_200M_050219_1,15235,TVDFYFEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15236 74.869 80.0 357780.0 25 0 26159.0 -1 0 72 560.32203148338 559.3147550167799 1 560.3228027224541 MULTI CID FTMS 0 0 0 15220 91092.390625 0.0283970588430131 -6 0.5104522705078125 16 3 YHR 3 -1 21.427 0.0 0.0 3.8309 0.0 0.0 85.08983809638828 0.0 85.08983809638828 0.0 11.04807146599672 0.0 0.0 0 0.0 0.0 0.0 0.0 YHR 3.8309 - 15 1 1.174 25476.3 1.0 9643 5591 15220 HBL1_DMSO_200M_050219_1,15236 HBL1_DMSO_200M_050219_1,15236, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15237 74.879 590.0 131250.0 25 0 23514.0 -1 YYYESRCCRNT 11 101 786.3202463613035 1570.6259397894069 2 786.3200561404228 MULTI CID FTMS 0 0 0 15220 74401.2890625 0.2579423871478272 4 -0.362640380859375 17 2 Carbamidomethyl (C) _YYYESRC(Carbamidomethyl (C))C(Carbamidomethyl (C))RNT_ ENSG00000155890|ENST00000286349|TRIM42;nc|ENSG00000155890|Q8IWZ5-2|TRIM42 1.4819007175156935 0.86815623132643 3 Y 1 -1 14.604 0.0 0.0 0.92983 0.0 0.0 1389.5515664757334 0.0 1389.5515664757334 0.0 3.634993639681312 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.92983 + + 125 + 1 1.174 61388.9 1.0 9644 5591 15220 HBL1_DMSO_200M_050219_1,15237 HBL1_DMSO_200M_050219_1,15237,YYYESRCCRNT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15239 74.883 7.0 9247700.0 25 0 940580.0 + 41329 VPILAPRI 8 71 439.79465879941694 877.5747646656339 2 439.7947265505791 MULTI CID FTMS 0 0 0 15238 14447858.0 1.0 0 0.0 1 Unmodified _VPILAPRI_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 56.541270873467816 0.1144128637334507 3 VP{I|L}{I|L}A[RP]{I|L} 8 0 + 69.074 0.0 0.0 7.871 7.871 97.455 0.0 0.0 0.0 44.63670477973761 6.844250411761166 6.844250411761166 69.07367977206474 0 0.7059771852360797 1.3979400086720375 0.0 0.7302046884880937 + + VP{I|L}{I|L}A[RP]{I|L} 7.871 + + 82 + 1 1.178 56534.4 1.0 9645 5592 15238 HBL1_DMSO_200M_050219_1,15239 HBL1_DMSO_200M_050219_1,15239,VPILAPRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15240 74.885 15.0 6575900.0 25 0 1560300.0 + 4067 DAMKYTIVV 9 116 520.2782689739805 1038.541985014761 2 520.2781860232353 MULTI CID FTMS 0 0 0 15238 5733946.5 0.0831568349058929 7 -0.5223236083984375 2 Unmodified _DAMKYTIVV_ ENSG00000152234|ENST00000398752|ATP5F1A;nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A 51.629811660486645 0.0367964933207742 3 {[DA]|[EG]}MKYT{I|L}VV 9 0 + 64.592 0.0 0.0 6.2195 6.2195 91.476 0.0 0.0 0.0 22.54863339151541 34.57203416424356 22.54863339151541 21.37218422611668 0 1.1237125054200234 1.3979400086720375 1.305462187404089 0.0 + + {[DA]|[EG]}MKYT{I|L}VV;{[DA]|[EG]}MK{I|L}TYVV;[YT]{I|L}KMDAVV;[YT]K{I|L}MDAVV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[DA]|[EG]}YT{I|L}VV;{[SA]|[TG]}{[WT]|[RM]}YT{I|L}VV;[YT]{I|L}{[QC]|[C(Carbamidomethyl (C))A]}T{I|L}VV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WY]T{I|L}VV;[YT]{I|L}TQC{I|L}VV;[R{M(Oxidation (M))|F}]VM{I|L}K{M(Oxidation (M))|F}V 6.2195;4.1616;3.9898;3.7424;3.5231;3.3825;3.1264;2.9922;2.4988;2.3719 +;-;-;-;-;-;-;-;-;- + 1230 1 1.178 80515.4 1.0 9646 5592 15238 HBL1_DMSO_200M_050219_1,15240 HBL1_DMSO_200M_050219_1,15240,DAMKYTIVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15241 74.886 10.0 1934100.0 25 0 300600.0 + 1314 AIVKEIVNI 9 40 499.8157754119609 997.6169978907218 2 499.8159973025322 MULTI CID FTMS 0 0 0 15238 6900342.5 1.0 0 0.0 3 Unmodified _AIVKEIVNI_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 19.361941925380144 0.3125782356748823 3 {NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]A{I|L}VN{I|L} 9 3 {NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]A{I|L}V + + 17.691 23.6 3.1364 1.7733 1.7733 48.684 0.0 0.0 0.0 0.0 -11.980071641894202 -11.980071641894202 0.0 0 0.0 0.0 0.0 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]A{I|L}VN{I|L} 1.7733 - 46 + 1 1.178 24209.5 1.0 9647 5592 15238 HBL1_DMSO_200M_050219_1,15241 HBL1_DMSO_200M_050219_1,15241,AIVKEIVNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15242 74.887 10.0 6587300.0 25 0 794570.0 + 4677 DAYVLPKLYVK 11 59 654.8817637143413 1307.7489744954826 2 654.8823730349541 MULTI CID FTMS 0 0 0 15238 6424571.0 1.0 0 0.0 4 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 51.41523569358685 0.1097924807909074 3 {[DA]|[EG]}YV{I|L}[KP]{I|L}YVK 11 0 + 72.004 0.0 0.0 5.5059 5.5059 90.295 0.0 0.0 0.0 38.10353184424318 15.510603164455446 15.510603164455446 50.07588512963582 0 1.7134679910804405 1.6989700043360187 0.0 0.2887254899964357 + + {[DA]|[EG]}YV{I|L}[KP]{I|L}YVK;[YV]{I|L}[KP]K[DG]Y{I|L}{I|L};[KP]{I|L}YVK[DG]Y{I|L}{I|L} 5.5059;1.6768;1.5071 +;-;- + 211 + 1 1.178 52587.3 1.0 9648 5592 15238 HBL1_DMSO_200M_050219_1,15242 HBL1_DMSO_200M_050219_1,15242,DAYVLPKLYVK True True DAYVLPKLYVK 74.887026 654.882373034954 341381936.0 15238.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 9.920004526774088 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15243 74.888 36.0 628010.0 25 0 54935.0 38025 TPAPRRQGLKG 11 54 590.8485088342304 1179.6824647352607 2 590.8489868044853 MULTI CID FTMS 0 0 0 15238 4101868.75 1.0 0 0.0 5 Unmodified _TPAPRRQGLKG_ ENST00000218758.9_1_19:11688076-11689709:-|nuORF;ENST00000592659.1_1_19:11688743-11689709:-|nuORF 1.0714618166137932 0.8700927088084459 3 {M(Oxidation (M))|F} 1 11 5.4846 0.0 0.0 0.46492 0.0 0.0 589.4272900299858 440.1871431940063 1029.614433223992 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.46492 - 6 + 1 1.178 23623.2 1.0 9649 5592 15238 HBL1_DMSO_200M_050219_1,15243 HBL1_DMSO_200M_050219_1,15243,TPAPRRQGLKG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15244 74.889 27.0 2164800.0 25 0 328630.0 + 22132 LPPQPKVK 8 57 453.7921119878436 905.5696710424872 2 453.7923461794853 MULTI CID FTMS 0 0 0 15238 3544866.5 0.0553469734854124 24 -1.821075439453125 6 Unmodified _LPPQPKVK_ REV__ENSG00000204463|ENST00000676615|BAG6;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6 19.438996006549623 0.6237395211498085 3 {I|L}PP 3 -1 53.698 0.0 0.0 5.9297 0.0 0.0 0.0 595.358012450597 595.358012450597 42.27790430105793 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 {I|L}PP 5.9297 + + 20 + 1 1.178 49705.0 1.0 9650 5592 15238 HBL1_DMSO_200M_050219_1,15244 HBL1_DMSO_200M_050219_1,15244,LPPQPKVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15245 74.891 21.0 913170.0 25 0 84354.0 45658 YVRRRLTAE 9 49 582.3353301673142 1162.6561074014282 2 582.3355590701103 MULTI CID FTMS 0 0 0 15238 3299127.25 0.6289831361235543 2 -0.1677627563476562 7 Unmodified _YVRRRLTAE_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 0.6014990680409731 0.8936861360942873 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.178 23316.0 1.0 9651 5592 15238 HBL1_DMSO_200M_050219_1,15245 HBL1_DMSO_200M_050219_1,15245,YVRRRLTAE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15246 74.892 33.0 1566700.0 25 0 464700.0 -1 CIFLDEQCCFY 11 65 777.8067631544496 1553.5989733756992 2 777.8075439333916 MULTI CID FTMS 0 0 0 15238 2689314.25 0.2209779683840403 4 -0.32208251953125 8 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))IFLDEQC(Carbamidomethyl (C))C(Carbamidomethyl (C))FY_ HERVFH21-int_dup68|chrX:64848898-64850686:+|1.1618635505066113|0.1868304972504996|2.64|46.0|9|1|sense 1.3295316138638542 0.8688751186870782 3 Y[RN]YYYY 7 -1 30.233 0.0 0.0 1.946 0.0 0.0 450.1394825666032 0.0 450.1394825666032 0.0 12.998037644757048 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.8494850021680094 Y[RN]YYYY 1.946 - 131 1 1.178 44347.6 1.0 9652 5592 15238 HBL1_DMSO_200M_050219_1,15246 HBL1_DMSO_200M_050219_1,15246,CIFLDEQCCFY False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 15247 74.893 25.0 1255300.0 25 0 137230.0 + -1 LPLCPVSSTV 10 70 536.787520797261 1071.560488661322 2 536.7879516482353 MULTI CID FTMS 0 0 0 15238 2121586.25 0.0067720308525204 19 -1.3732147216796875 9 Carbamidomethyl (C) _LPLC(Carbamidomethyl (C))PVSSTV_ REV__ENSG00000135248|ENST00000621392|GARIN1B;REV__ENST00000493738.5_1_7:128354060-128363382:+|nuORF;REV__nc|ENSG00000135248|Q96KD3|GARIN1B 10.823927491677226 0.6659270209832991 3 [EP]WVDS{I|L}KV 9 -1 + 39.046 0.0 0.0 3.6439 3.6439 51.567 0.0 0.0 0.0 0.0 4.9434157707161575 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.0 [EP]WVDS{I|L}KV;[WE]PVDS{I|L}KV;{[MS]|[{M(Oxidation (M))|F}A]}PPVDS{I|L}KV;[WE]PVDSV[K{I|L}];[EP]WVDSV[K{I|L}];{[MS]|[{M(Oxidation (M))|F}A]}PPVDSV[K{I|L}];[{I|L}P][WD]DS{I|L}KV;[WE]PVK[DV]{[TV]|[{I|L}S]};[EP]WVK[DV]{[TV]|[{I|L}S]};{[MG]|[TS]}[HS]VDS{I|L}KV 3.6439;3.6439;3.3202;3.1825;3.1825;2.8589;2.4767;2.3446;2.3446;2.131 -;-;-;-;-;-;-;-;-;- 241 1 1.178 34755.5 1.0 9653 5592 15238 HBL1_DMSO_200M_050219_1,15247 HBL1_DMSO_200M_050219_1,15247,LPLCPVSSTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15248 74.896 179.0 1882400.0 25 0 175780.0 42443 VTFSREVIVV 10 179 574.836125945584 1147.6576989579678 2 574.8358642458916 MULTI CID FTMS 0 0 0 15238 1527833.25 0.9224666812729768 -5 0.3966064453125 10 Unmodified _VTFSREVIVV_ ENSG00000237651|ENST00000432605|C2orf74 10.823927491677226 0.6659270209832991 3 V 1 9 12.474 0.0 0.0 1.0869 0.0 0.0 1030.5781681735912 0.0 1030.5781681735912 0.0 4.186363512511502 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.0869 + + 93 + 1 1.178 249132.9 1.0 9654 5592 15238 HBL1_DMSO_200M_050219_1,15248 HBL1_DMSO_200M_050219_1,15248,VTFSREVIVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15249 74.898 78.0 1160400.0 25 0 132780.0 + 44512 YPDGRIIMV 9 98 532.2839278741702 1062.5533028151403 2 532.2838012576103 MULTI CID FTMS 0 0 0 15238 1402238.125 0.5864697900150607 2 -0.1677627563476562 11 Unmodified _YPDGRIIMV_ ENSG00000141446|ENST00000269214|ESCO1 41.95555342248728 0.0647214845423414 3 YPD 3 6 44.935 0.0 0.0 4.229 0.0 0.0 0.0 684.3878099018973 684.3878099018973 13.11960923695672 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + YPD 4.229 + + 528 + 1 1.178 80263.8 1.0 9655 5592 15238 HBL1_DMSO_200M_050219_1,15249 HBL1_DMSO_200M_050219_1,15249,YPDGRIIMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15250 74.9 99.0 1083400.0 25 0 160760.0 + 36975 TFGERVVAF 9 119 513.2746942688017 1024.5348356044033 2 513.2749511599541 MULTI CID FTMS 0 0 0 15238 1252424.25 1.0 0 0.0 12 Unmodified _TFGERVVAF_ ENSG00000048392|ENST00000251810|RRM2B;nc|ENSG00000048392|Q7LG56-2|RRM2B;nc|ENSG00000048392|Q7LG56-6|RRM2B 49.52724829834842 0.0414064571532091 3 T{M(Oxidation (M))|F}W[{I|L}P][KS]{M(Oxidation (M))|F} 8 6 + 42.638 0.0 0.0 4.1617 4.1617 72.717 0.0 0.0 0.0 1.7693157241888002 1.7693157241888002 1.7693157241888002 1.7693157241888002 0 1.0 0.0 0.3252574989159953 0.0 T{M(Oxidation (M))|F}W[{I|L}P][KS]{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[QA]V{M(Oxidation (M))|F}TA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[QA]VA{M(Oxidation (M))|F}T{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]GERVVA{M(Oxidation (M))|F};[VG]WVV{M(Oxidation (M))|F}TA{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[RD]V{M(Oxidation (M))|F}TA{M(Oxidation (M))|F};T{M(Oxidation (M))|F}[HV]V[Y{I|L}]{M(Oxidation (M))|F};[VG]WVVA{M(Oxidation (M))|F}T{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[RD]VA{M(Oxidation (M))|F}T{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[QA]V{M(Oxidation (M))|F}AT{M(Oxidation (M))|F} 4.1617;3.989;3.7737;3.737;3.6148;3.5186;3.4558;3.3994;3.3033;3.186 -;-;-;+;-;-;-;-;-;- + 584 + 1 1.178 87536.6 1.0 9656 5592 15238 HBL1_DMSO_200M_050219_1,15250 HBL1_DMSO_200M_050219_1,15250,TFGERVVAF True True TFGERVVAF 74.900364 513.274951159954 8471805.0 15238.0 ENSG00000048392|ENST00000251810|RRM2B;;nc|ENSG00000048392|Q7LG56-6|RRM2B;;nc|ENSG00000048392|Q7LG56-2|RRM2B 6.47020959854126 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15251 74.902 85.0 1264100.0 25 0 163320.0 + 31931 RVAQLEQVYI 10 90 609.8459423103815 1217.6773316875629 2 609.8467285037041 MULTI CID FTMS 0 0 0 15238 1057329.125 0.2931065310877236 2 -0.1677627563476562 13 Unmodified _RVAQLEQVYI_ ENSG00000100028|ENST00000215829|SNRPD3;nc|ENSG00000286070|P62318-2|SNRPD3 22.65808497894818 0.4596126414678359 3 Q{I|L}EQVY{I|L} 7 3 53.76 0.0 0.0 4.415 0.0 0.0 326.2058277814469 0.0 326.2058277814469 0.0 42.791229100142445 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + Q{I|L}EQVY{I|L} 4.415 + + 132 1 1.178 82430.7 1.0 9657 5592 15238 HBL1_DMSO_200M_050219_1,15251 HBL1_DMSO_200M_050219_1,15251,RVAQLEQVYI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15252 74.907 280.0 869460.0 25 0 112710.0 + 3729 DAFRVNVI 8 155 467.261603560774 932.508654188348 2 467.2616454958916 MULTI CID FTMS 0 0 0 15238 902143.375 0.0301662704879852 -5 0.3966064453125 14 Unmodified _DAFRVNVI_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 65.23502041540118 0.1164516490932339 3 {[DA]|[EG]}{M(Oxidation (M))|F}RVNV{I|L} 8 0 + 71.763 0.0 0.0 7.6956 7.6956 93.235 0.0 0.0 0.0 24.76403468139865 14.90463059526342 14.90463059526342 9.262137858390822 0 1.6549471895720984 1.6989700043360187 0.2742275032520141 0.2396518287104437 + + {[DA]|[EG]}{M(Oxidation (M))|F}RVNV{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}RVGGV{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}RVVN{I|L};{[NV]|[RG]}R{M(Oxidation (M))|F}ADV{I|L};{[NV]|[RG]}R{M(Oxidation (M))|F}WV{I|L};[VG]GR{M(Oxidation (M))|F}ADV{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}RVVGG{I|L};[VS]{M(Oxidation (M))|F}RVNV{I|L};{[DA]|[EG]}{[NV]|[RG]}[R{M(Oxidation (M))|F}]V{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}RVQVV 7.6956;6.7024;5.6658;5.04;4.8081;4.6897;4.6725;4.6129;4.2254;3.9622 +;-;-;-;-;-;-;-;-;- + 1591 1 1.178 186229.0 1.0 9658 5592 15238 HBL1_DMSO_200M_050219_1,15252 HBL1_DMSO_200M_050219_1,15252,DAFRVNVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15253 74.912 274.0 367990.0 25 0 51553.0 + -1 SLLRQRPLRV 10 105 640.4011108279228 0 640.4011108279228 PEAK CID FTMS 0 0 0 -1 0 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SLLRQRPLRV_ REV__ENST00000307968.11_1_5:131007873-131007906:-|nuORF 3.5964929083625545 0.3961065659209837 3 {M(Oxidation (M))|F}MVKA 5 -1 26.013 0.0 0.0 2.0342 0.0 0.0 492.364991892775 207.1144503229125 699.4794422156875 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 {M(Oxidation (M))|F}MVKA 2.0342 - 149 + 1 1.178 79700.7 1.0 9659 5592 15238 HBL1_DMSO_200M_050219_1,15253 HBL1_DMSO_200M_050219_1,15253,SLLRQRPLRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15254 74.914 79.0 1489100.0 25 0 154990.0 + 25600 NFLNMSRSM 9 118 550.2544715783698 1098.4943902235395 2 550.2549316287041 MULTI CID FTMS 0 0 0 15238 760341.875 0.1332014545715732 -5 0.3966064453125 16 Unmodified _NFLNMSRSM_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 34.93206674587334 0.1032771302489716 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}NMSRSM 9 0 + 46.007 0.0 0.0 4.1882 4.1882 79.284 0.0 0.0 0.0 34.76995044366 1.0040844714886603 1.0040844714886603 6.838125429652784 0 0.9247425010840048 0.0 0.1643943297944484 0.8494850021680094 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}NMSRSM;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}NM[WQ]{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}MNSRSM;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}GGMSRSM;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WY]N{I|L}SR;GG{M(Oxidation (M))|F}[WY]N{I|L}SR;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}MN[WQ]{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[HN]MN{I|L}SR;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}GGM[WQ]{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}MGGSRSM 4.1882;3.5657;3.5519;3.3499;3.107;3.0021;2.9294;2.8914;2.7225;2.7136 +;-;-;-;-;-;-;-;-;- + 560 + 1 1.178 94061.6 1.0 9660 5592 15238 HBL1_DMSO_200M_050219_1,15254 HBL1_DMSO_200M_050219_1,15254,NFLNMSRSM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15255 74.917 125.0 1104400.0 25 0 232210.0 + 9985 FPIDHFTHI 9 139 376.19429728322586 1125.5610624498777 3 376.1937744021416 MULTI CID FTMS 0 0 0 15238 689681.9375 0.6598649499395562 -2 0.1643600463867187 17 Unmodified _FPIDHFTHI_ ENSG00000155363|ENST00000369645|MOV10;ENST00000468624.5_1_1:113217534-113241292:+|nuORF;ENST00000496577.5_1_1:113231344-113241292:+|nuORF;nc|ENSG00000155363|Q9HCE1-2|MOV10 41.95555342248728 0.0647214845423414 3 {M(Oxidation (M))|F}{I|L}PDH{M(Oxidation (M))|F}TH{I|L} 9 2 + 64.364 0.0 0.0 5.7184 5.7184 77.082 0.0 0.0 0.0 12.252684618815088 3.309932190414244 3.309932190414244 1.3601701108756856 0 0.3494850021680094 0.0 0.6747425010840047 0.0 {M(Oxidation (M))|F}{I|L}PDH{M(Oxidation (M))|F}TH{I|L};{M(Oxidation (M))|F}P{I|L}DH{M(Oxidation (M))|F}TH{I|L};{M(Oxidation (M))|F}{I|L}PDH{M(Oxidation (M))|F}T{I|L}H;{M(Oxidation (M))|F}P{I|L}DH{M(Oxidation (M))|F}T{I|L}H;{M(Oxidation (M))|F}{I|L}[WY]{M(Oxidation (M))|F}TH{I|L};{M(Oxidation (M))|F}{I|L}[WY]{M(Oxidation (M))|F}T{I|L}H;[HT][RK]MDP{I|L}E;[HT][RK]MD{I|L}PE;{M(Oxidation (M))|F}P[QT][WP]TH{I|L};[HT]{M(Oxidation (M))|F}H[{M(Oxidation (M))|F}V]P{I|L}E 5.7184;5.5976;5.4244;5.3035;3.7229;3.4288;2.8137;2.6929;2.4687;2.263 -;+;-;-;-;-;-;-;-;- + 847 + 1 1.178 119033.0 1.0 9661 5592 15238 HBL1_DMSO_200M_050219_1,15255 HBL1_DMSO_200M_050219_1,15255,FPIDHFTHI True True FPIDHFTHI 74.916853 376.193774402142 19243646.0 15238.0 ENST00000468624.5_1_1:113217534-113241292:+|nuORF;;nc|ENSG00000155363|Q9HCE1-2|MOV10;;ENSG00000155363|ENST00000369645|MOV10;;ENST00000496577.5_1_1:113231344-113241292:+|nuORF 7.160037517547607 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15256 74.922 301.0 753270.0 25 0 39118.0 + 17786 KQIQEDWEL 9 180 594.7986820375829 1187.5828111419655 2 594.7982665896416 MULTI CID FTMS 0 0 0 15238 661102.25 0.6323175732707809 -2 0.1643600463867187 18 Unmodified _KQIQEDWEL_ ENSG00000154710|ENST00000284957|RABGEF1;nc|ENSG00000154710|Q9UJ41-3|RABGEF1;nc|ENSG00000154710|Q9UJ41-4|RABGEF1 92.4914307365334 0.0139747738690111 3 [AG]K{I|L}QEDWE{I|L} 10 3 + 90.341 0.0 0.0 7.6071 7.6071 81.102 0.0 0.0 0.0 2.221162170968072 16.53212513775344 2.221162170968072 0.4845500650402812 0 0.7742275032520141 0.958607314841775 1.25 2.559894379144197 [AG]K{I|L}QEDWE{I|L};[AG]{I|L}KQEDWE{I|L};[Q{I|L}]KQEDWE{I|L};[K{I|L}]QQEDWE{I|L};[KQ]{I|L}QEDWE{I|L};[AG]K{I|L}[AG]EDWE{I|L};{[QN]|[E{I|L}]|[KN]}[RV]EDWE{I|L};[AG]{I|L}K[AG]EDWE{I|L};[AG]{I|L}QKEDWE{I|L};[Q{I|L}]K[AG]EDWE{I|L} 7.6071;7.5663;7.4201;7.3678;7.2591;6.8355;6.8078;6.7947;6.7043;6.6447 -;-;-;-;+;-;-;-;-;- + 14087 1 1.178 165426.9 1.0 9662 5592 15238 HBL1_DMSO_200M_050219_1,15256 HBL1_DMSO_200M_050219_1,15256,KQIQEDWEL True True KQIQEDWEL 74.922366 594.798266589642 20010634.0 15238.0 nc|ENSG00000154710|Q9UJ41-3|RABGEF1;;nc|ENSG00000154710|Q9UJ41-4|RABGEF1;;ENSG00000154710|ENST00000284957|RABGEF1 5.863356431325276 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15257 74.925 122.0 967120.0 25 0 164720.0 + 35766 SVILKLSNV 9 124 486.8084086376071 971.6022643420142 2 486.8083984255791 MULTI CID FTMS 0 0 0 15238 630009.1875 1.0 0 0.0 19 Unmodified _SVILKLSNV_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000452600.1_1_2:130987586-130988813:+|nuORF;ENST00000477976.5_1_1:880076-889593:-|nuORF 53.832793166522166 0.0319663582346103 3 [VS]{I|L}{I|L}KEGKV 9 3 + 61.754 0.0 0.0 6.3559 6.3559 77.322 0.0 0.0 0.0 17.35190554423035 3.254340747697526 3.254340747697526 0.3374354041203204 0 1.1677353201839438 2.0 0.3494850021680094 1.2302046884880935 [VS]{I|L}{I|L}KEGKV;[VS]{I|L}{I|L}K{[TV]|[{I|L}S]}NV;[VS]{I|L}{I|L}K{[TV]|[{I|L}S]}GGV;[VS]{I|L}G[VS]{I|L}{I|L}[KG];[VS]{I|L}S[VG]{I|L}{I|L}[KG];{I|L}{I|L}K{I|L}SDV[KG];{[TV]|[{I|L}S]}VG[VS]{I|L}{I|L}[KG];[K{I|L}]{I|L}{I|L}SDV[KG];{[TV]|[{I|L}S]}VS[VG]{I|L}{I|L}[KG];{I|L}{I|L}S[QT]{I|L}{I|L}[KG] 6.3559;6.3212;5.2092;4.6797;4.2524;3.6097;2.56;2.3521;2.1328;1.9173 -;+;-;-;-;-;-;-;-;- + 1104 + 1 1.178 94774.2 1.0 9663 5592 15238 HBL1_DMSO_200M_050219_1,15257 HBL1_DMSO_200M_050219_1,15257,SVILKLSNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15258 74.931 336.0 970130.0 25 0 119390.0 + 4565 DAYRMLSRL 9 218 562.7974903090313 1123.5804276848626 2 562.7982055544853 MULTI CID FTMS 0 0 0 15238 580667.9375 0.312951965728601 2 -0.1677627563476562 20 Unmodified _DAYRMLSRL_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 37.07464296494664 0.0915153923251136 3 {I|L}DNKH{M(Oxidation (M))|F}TH{I|L} 9 7 + 37.673 0.0 0.0 3.353 3.353 72.58 0.0 0.0 0.0 17.811121573686744 2.9889606477484847 2.9889606477484847 3.0102999566398125 0 0.5044321917401079 0.8239087409443188 0.2742275032520141 0.0 {I|L}DNKH{M(Oxidation (M))|F}TH{I|L};D{I|L}NKH{M(Oxidation (M))|F}TH{I|L};{I|L}D[KG]GH{M(Oxidation (M))|F}TH{I|L};{I|L}DNKH{M(Oxidation (M))|F}HT{I|L};{I|L}E{I|L}D{[VA]|[{I|L}G]}NTH{I|L};D{I|L}[KG]GH{M(Oxidation (M))|F}TH{I|L};{I|L}DNKR[DN]H{I|L};D{I|L}NKH{M(Oxidation (M))|F}HT{I|L};{I|L}D[KG]GH{M(Oxidation (M))|F}HT{I|L};D{I|L}NKR[DN]H{I|L} 3.353;3.085;2.8974;2.7045;2.6515;2.6295;2.5146;2.4366;2.2489;2.2466 -;-;-;-;-;-;-;-;-;- 5081 + 1 1.178 247350.0 1.0 9664 5592 15238 HBL1_DMSO_200M_050219_1,15258 HBL1_DMSO_200M_050219_1,15258,DAYRMLSRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15260 74.935 14.0 6098600.0 25 0 595040.0 + 4681 DAYVLPKLYVK 11 80 436.9239600897196 1307.7500508693588 3 436.9241515994072 MULTI CID FTMS 0 0 0 15259 3635320.25 0.6976789297646026 1 -0.1159744262695312 1 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 45.739877483867886 0.1412225664835785 3 {[DA]|[EG]}YV{I|L}PK{I|L}YVK 11 0 + 80.569 0.0 0.0 6.1609 6.1609 90.727 0.0 0.0 0.0 38.17349866261589 13.31868262928188 13.31868262928188 16.83175737152787 0 0.6861818737241735 2.0 0.0 0.2887254899964357 + + {[DA]|[EG]}YV{I|L}PK{I|L}YVK;{[DA]|[EG]}YV{I|L}PK[YV]{I|L}K 6.1609;4.8738 +;- + 326 + 1 1.178 75085.1 1.0 9665 5593 15259 HBL1_DMSO_200M_050219_1,15260 HBL1_DMSO_200M_050219_1,15260,DAYVLPKLYVK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15261 74.936 23.0 3515900.0 25 0 488500.0 + 32210 RVVDYLTKL 9 84 553.8316687177116 1105.6487845022232 2 553.8323852419853 MULTI CID FTMS 0 0 0 15259 2345264.0 0.1594503071435487 4 -0.3223800659179687 2 Unmodified _RVVDYLTKL_ ENSG00000178425|ENST00000319550|NT5DC1;ENST00000417846.2_1_6:116432031-116439170:+|nuORF;nc|ENSG00000178425|Q5TFE4-2|NT5DC1 22.65808497894818 0.2428932432760099 3 T{I|L}Y 3 8 33.94 0.0 0.0 3.0697 0.0 0.0 259.1880883561219 466.2427813367276 725.4308696928495 0.0 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 T{I|L}Y 3.0697 - 105 + 1 1.178 62831.7 1.0 9666 5593 15259 HBL1_DMSO_200M_050219_1,15261 HBL1_DMSO_200M_050219_1,15261,RVVDYLTKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15262 74.938 16.0 3363200.0 25 0 749210.0 + 14728 IKWQVFLML 9 73 589.342962126194 1176.671371319188 2 589.3433105349541 MULTI CID FTMS 0 0 0 15259 4287060.0 0.8831972074300836 3 -0.270294189453125 3 Unmodified _IKWQVFLML_ REV__ENST00000310169.2_1_4:40337858-40337948:+|nuORF 0.6014990680409731 0.8936861360942873 3 W 1 -1 6.9897 0.0 0.0 0.59402 0.0 0.0 704.455259113913 283.1193026178344 987.5745617317476 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.59402 + + 1 + 1 1.178 46900.2 1.0 9667 5593 15259 HBL1_DMSO_200M_050219_1,15262 HBL1_DMSO_200M_050219_1,15262,IKWQVFLML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15263 74.939 17.0 3590200.0 25 0 531660.0 + 17083 KLELEKRSE 9 73 566.3222542769303 1130.6299556206604 2 566.3223144412041 MULTI CID FTMS 0 0 0 15259 3495225.75 0.7068070934582302 3 -0.270294189453125 4 Unmodified _KLELEKRSE_ REV__ENSG00000127914|ENST00000356239|AKAP9;REV__ENST00000493453.1_1_7:91570251-91670224:+|nuORF;REV__nc|ENSG00000127914|Q99996-1|AKAP9;REV__nc|ENSG00000127914|Q99996-3|AKAP9;REV__nc|ENSG00000127914|Q99996-4|AKAP9;REV__nc|ENSG00000127914|Q99996-5|AKAP9;REV__nc|ENSG00000127914|Q99996-6|AKAP9 3.5964929083625545 0.7891324200061827 3 Y 1 -1 11.259 0.0 0.0 0.99582 0.0 0.0 949.5554449778856 0.0 949.5554449778856 0.0 11.259059864968997 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.99582 - 2 + 1 1.178 47526.0 1.0 9668 5593 15259 HBL1_DMSO_200M_050219_1,15263 HBL1_DMSO_200M_050219_1,15263,KLELEKRSE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15264 74.94 42.0 2024900.0 25 0 203210.0 + + -1 HLIPDAPEL 9 96 502.27585584449577 1002.5371587557916 2 502.7744018435478 MULTI CID FTMS 0 0 0 15259 1184870.5 0.4875864814732893 15 -1.1070022583007812 5 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PSAFLQVSL_ ENSG00000129083|ENST00000439561|COPB1 11.640296217721598 0.521594087909532 3 [EP]G[H{I|L}]{I|L} 6 -1 24.722 0.0 0.0 2.466 0.0 0.0 0.0 353.1698851564353 353.1698851564353 5.268477219983222 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.0 [EP]G[H{I|L}]{I|L} 2.466 - 136 1 1.178 71886.8 1.0 9669 5593 15259 HBL1_DMSO_200M_050219_1,15264 HBL1_DMSO_200M_050219_1,15264,PSAFLQVSL False False HLIPDAPEL 74.939995 502.774401843548 24733222.0 15259.0 ENSG00000129083|ENST00000439561|COPB1 5.246385415395101 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15265 74.941 46.0 1400900.0 25 0 134230.0 + 21966 LPPNLYPTV 9 110 507.2871405317021 1012.559728130204 2 507.2875244021416 MULTI CID FTMS 0 0 0 15259 629898.5625 0.4700611448410457 -10 0.8392410278320312 6 Unmodified _LPPNLYPTV_ ENSG00000010017|ENST00000011619|RANBP9;nc|ENSG00000010017|Q96S59-3|RANBP9 34.10243960390752 0.1078313939113124 3 [{I|L}P]NPY{I|L}PS{I|L} 9 5 + 50.608 0.0 0.0 4.9981 4.9981 75.845 0.0 0.0 0.0 2.0848478805837445 15.38750309660614 2.0848478805837445 2.0848478805837445 0 0.9929928190999392 1.5228787452803376 0.0 0.0 [{I|L}P]NPY{I|L}PS{I|L};{[VA]|[{I|L}G]}GPPY{I|L}PS{I|L};[{I|L}P]NP{I|L}YPS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PPY{I|L}PS{I|L};{[VA]|[{I|L}G]}GPP{I|L}YPS{I|L};[{I|L}P]NYP{I|L}PS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PP{I|L}YPS{I|L};{[VA]|[{I|L}G]}GPYP{I|L}PS{I|L};[{I|L}P]GGPY{I|L}PS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PYP{I|L}PS{I|L} 4.9981;4.7922;4.7008;4.5226;4.4949;4.4035;4.2253;4.1976;4.0887;3.928 -;-;-;-;-;-;-;-;-;- 1250 1 1.178 58501.2 1.0 9670 5593 15259 HBL1_DMSO_200M_050219_1,15265 HBL1_DMSO_200M_050219_1,15265,LPPNLYPTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15266 74.942 46.0 1618600.0 25 0 247300.0 + 27552 SALELQMKV 9 118 510.24842506977336 1018.4822972063467 2 510.2491027712822 MULTI CID FTMS 0 0 0 15259 596143.0 0.2325812668737027 -4 0.3032684326171875 7 Unmodified _PLAESQMML_ ENSG00000163874|ENST00000373087|ZC3H12A 16.942295170755138 0.3780752226737986 3 {[QN]|[E{I|L}]|[KN]}APVG 6 7 29.461 0.0 0.0 2.8926 0.0 0.0 0.0 449.151522630428 449.151522630428 8.262743881329513 0.0 0.0 0.0 0 0.3252574989159953 1.2218487496163564 0.0 0.0 {[QN]|[E{I|L}]|[KN]}APVG 2.8926 - 609 1 1.178 61960.8 1.0 9671 5593 15259 HBL1_DMSO_200M_050219_1,15266 HBL1_DMSO_200M_050219_1,15266,PLAESQMML False False SALELQMKV 74.94248 510.249102771282 5052728.0 15259.0 ENSG00000163874|ENST00000373087|ZC3H12A 0.8450519939263662 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15267 74.945 97.0 1319600.0 25 0 119890.0 + 44084 YIYDEQGKLA 10 134 600.3013646138315 1198.588176294463 2 600.3019286990166 MULTI CID FTMS 0 0 0 15259 601449.0625 0.5714082046774174 3 -0.270294189453125 8 Unmodified _YIYDEQGKLA_ REV__ENSG00000213160|ENST00000392647|KLHL23 16.149105407346934 0.5765757077271437 3 Y{I|L}YEDE 6 -1 69.201 0.0 0.0 5.7735 0.0 0.0 0.0 383.24021326236567 383.24021326236567 56.43742959639343 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 Y{I|L}YEDE 5.7735 - 603 + 1 1.178 95227.7 1.0 9672 5593 15259 HBL1_DMSO_200M_050219_1,15267 HBL1_DMSO_200M_050219_1,15267,YIYDEQGKLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15268 74.948 146.0 958120.0 25 0 87744.0 + 39171 TYPENWRAF 9 151 592.2805508823599 1182.5465488315197 2 592.2800170779228 MULTI CID FTMS 0 0 0 15259 491096.75 0.680295170544174 -3 0.2161483764648437 9 Unmodified _TYPENWRAF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 29.081581746732265 0.1611639662936252 3 [YT]PENK 6 4 58.461 0.0 0.0 4.9436 0.0 0.0 0.0 447.1891878717407 447.1891878717407 29.726890629795548 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.4247425010840047 0.3807196863200844 [YT]PENK 4.9436 - 1116 + 1 1.178 108689.1 1.0 9673 5593 15259 HBL1_DMSO_200M_050219_1,15268 HBL1_DMSO_200M_050219_1,15268,TYPENWRAF False True TYPENWRAF 74.947534 592.280017077923 24239910.0 15259.0 ENSG00000254772|ENST00000329251|EEF1G;;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;;nc|ENSG00000254772|P26641-2|EEF1G 5.907427787780762 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15269 74.951 187.0 860870.0 25 0 80927.0 + 21141 LPAQPMISV 9 169 478.2676585756288 954.5207642180576 2 478.2674438357353 MULTI CID FTMS 0 0 0 15259 362766.6875 1.0 0 0.0 10 Unmodified _LPAQPMISV_ ENSG00000117009|ENST00000366559|KMO;nc|ENSG00000117009|O15229-2|KMO;nc|ENSG00000117009|O15229-3|KMO 34.10243960390752 0.1078313939113124 3 [PA]Q{I|L}PM{I|L}[VS] 9 2 + 30.219 0.0 0.0 3.1659 3.1659 73.29 0.0 0.0 0.0 1.5617703225542598 15.195221397024753 1.5617703225542598 3.669057749320693 0 0.5 0.3979400086720376 0.0 0.0 [PA]Q{I|L}PM{I|L}[VS];[{I|L}P][QA]PM{I|L}[VS];[VS]HSN{I|L}{I|L}[VS];[PA][AG]{I|L}PM{I|L}[VS];[PA]QNN{I|L}{I|L}[VS];[{I|L}P]CPN{I|L}{I|L}[VS];[VS]HSGG{I|L}{I|L}[VS];[KP][PS]PM{I|L}[VS];{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}P[QA][VS];[{I|L}P]M{I|L}P[QA][VS] 3.1659;2.7815;2.4154;2.2012;1.658;1.5609;1.4507;1.2527;0.91863;0.70478 -;+;-;-;-;-;-;-;-;- + 576 1 1.178 127423.2 1.0 9674 5593 15259 HBL1_DMSO_200M_050219_1,15269 HBL1_DMSO_200M_050219_1,15269,LPAQPMISV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15270 74.953 87.0 895770.0 25 0 71455.0 + 21676 LPLNIERNI 9 106 541.3211683876418 1080.6277838420835 2 541.3224975466728 MULTI CID FTMS 0 0 0 15259 346871.3125 0.6586865839782695 1 -0.1159744262695312 11 Unmodified _LPLNIERNI_ ENSG00000112685|ENST00000230449|EXOC2 51.629811660486645 0.0367964933207742 3 {I|L}P{I|L}N{I|L}E[RN]{I|L} 9 0 + 82.005 0.0 0.0 7.5886 7.5886 85.931 0.0 0.0 0.0 33.46787486224656 3.309932190414244 3.309932190414244 3.309932190414244 0 1.110924374808178 1.6989700043360187 0.0 0.7742275032520141 + + {I|L}P{I|L}N{I|L}E[RN]{I|L};{I|L}P{I|L}N{I|L}[H{I|L}]YV;{I|L}P{I|L}{I|L}NE[RN]{I|L};{I|L}P{I|L}GG{I|L}E[RN]{I|L};{I|L}P{I|L}{I|L}N[H{I|L}]YV;{I|L}P{I|L}N{I|L}RR{[CP]|[EA]};{I|L}P{I|L}{I|L}GGE[RN]{I|L};{I|L}P{I|L}GG{I|L}[H{I|L}]YV;{I|L}P{I|L}{I|L}NRR{[CP]|[EA]};{I|L}P{I|L}N[KP]{[WT]|[RM]}{I|L} 7.5886;7.2823;6.8237;6.7365;6.5174;6.4725;5.9716;5.7137;5.7076;5.6905 +;-;-;-;-;-;-;-;-;- + 410 + 1 1.178 66255.2 1.0 9675 5593 15259 HBL1_DMSO_200M_050219_1,15270 HBL1_DMSO_200M_050219_1,15270,LPLNIERNI True True LPLNIERNI 74.95307 541.322497546673 3934715.0 15259.0 ENSG00000112685|ENST00000230449|EXOC2 3.229271332422892 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15271 74.956 147.0 618320.0 25 0 50331.0 + 10030 FPMSPVTSV 9 123 482.7448883471259 0 482.7441894412041 PEAK CID FTMS 0 0 0 15259 349569.59375 0.2972522660175754 -4 0.3032684326171875 12 Unmodified _FPMSPVTSV_ ENSG00000186818|ENST00000695418|LILRB4;nc|ENSG00000186818|Q8NHJ6-2|LILRB4;nc|ENSG00000186818|Q8NHJ6-3|LILRB4;nc|ENSG00000186818|Q8NHJ6|LILRB4 21.53697664764585 0.1871382778112851 3 WS 2 8 6.8103 0.0 0.0 0.70685 0.0 0.0 573.2830983721831 114.05657373599844 687.3396721081815 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 WS 0.70685 - 169 + 1 1.178 74285.1 1.0 9676 5593 15259 HBL1_DMSO_200M_050219_1,15271 HBL1_DMSO_200M_050219_1,15271,FPMSPVTSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15272 74.967 604.0 437560.0 25 0 46220.0 + 37576 TLIRSDAVALV 11 217 579.3486442689174 1156.682735604635 2 579.3494140505791 MULTI CID FTMS 0 0 0 15259 286047.46875 0.6205579959682627 -1 0.051788330078125 13 Unmodified _TLIRSDAVALV_ ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1 39.21299971606389 0.2245192836502623 3 [HV]{I|L}N[RH]VA{I|L}V 10 6 + 49.703 0.0 0.0 4.297 4.297 74.339 0.0 0.0 0.0 2.140012553530965 23.60583686569455 2.140012553530965 2.686364666612881 0 1.110924374808178 1.0 0.0 0.0 [HV]{I|L}N[RH]VA{I|L}V;[{I|L}A][RN][KC]AVA{I|L}V;[{I|L}T][R{I|L}]WWA{I|L}V;{[QN]|[E{I|L}]|[KN]}[K{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}VA{I|L}V;[HV]{I|L}GG[RH]VA{I|L}V;[{I|L}A]G{[NV]|[RG]}[KC]AVA{I|L}V;[HV]{I|L}N[RH]V{I|L}AV;[{I|L}A][RN][KC]AV{I|L}AV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]WWA{I|L}V;[{I|L}V]HN[RH]VA{I|L}V 4.297;4.0648;3.8639;3.7709;3.5047;3.4591;3.4523;3.22;3.2062;3.176 -;-;-;-;-;-;-;-;-;- 2213 1 1.178 200265.0 1.0 9677 5593 15259 HBL1_DMSO_200M_050219_1,15272 HBL1_DMSO_200M_050219_1,15272,TLIRSDAVALV False True TLIRSDAVALV 74.966566 579.349414050579 7146522.0 15259.0 nc|ENSG00000161533|Q15067|ACOX1;;nc|ENSG00000161533|Q15067-3|ACOX1;;ENSG00000161533|ENST00000293217|ACOX1 5.016459782918294 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15273 74.97 188.0 887300.0 25 0 161550.0 + 33663 SITTLHCYL 9 119 350.84850849122114 1049.5236960738634 3 350.8492004275322 MULTI CID FTMS 0 0 0 15259 287484.53125 0.327149786690418 -1 0.051788330078125 14 Unmodified _SITTLHCYL_ REV__ENST00000375651.6_1_6:31785473-31785653:+|nuORF 13.50788311687929 0.4710407108020397 3 [R{I|L}]DA 4 -1 20.445 0.0 0.0 1.9481 0.0 0.0 0.0 591.2625643244578 591.2625643244578 3.293037728310253 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 [R{I|L}]DA 1.9481 - 209 + 1 1.178 149204.9 1.0 9678 5593 15259 HBL1_DMSO_200M_050219_1,15273 HBL1_DMSO_200M_050219_1,15273,SITTLHCYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15274 74.984 800.0 272490.0 25 0 12031.0 + 42589 VTRGITYILNI 11 203 421.58726408529526 1261.739962856086 3 421.5872375369072 MULTI CID FTMS 0 0 0 15259 241129.640625 0.9888414668763066 1 -0.1159744262695312 15 Unmodified _VTRGITYILNI_ REV__ENSG00000172901|ENST00000357872|LVRN;REV__ENST00000512413.1_1_5:115357396-115361812:+|nuORF;REV__ENST00000515454.5_1_5:115350123-115359090:+|nuORF 10.315234532428624 0.8205777915985574 3 SV{I|L}{I|L}A{[DS]|[MA]|[CV]|TT}S{I|L} 9 -1 32.775 0.0 0.0 2.5976 0.0 0.0 358.22024408223973 0.0 358.22024408223973 0.0 22.305624222864097 0.0 0.0 0 0.0 0.0 0.5941876774005249 0.0 SV{I|L}{I|L}A{[DS]|[MA]|[CV]|TT}S{I|L} 2.5976 - 656 + 1 1.178 191665.1 0.9200000166893004 9679 5593 15259 HBL1_DMSO_200M_050219_1,15274 HBL1_DMSO_200M_050219_1,15274,VTRGITYILNI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15275 74.995 655.0 348150.0 25 0 27781.0 + + 10239 RVCEEIAIIPS 11 177 615.3316955737156 1228.648838214231 2 615.3307983279228 MULTI CID FTMS 0 0 0 15259 209246.46875 0.8123933078821195 1 -0.1159744262695312 16 Unmodified _FQPPPYALPLS_ ENSG00000182774|ENST00000647841|RPS17;ENST00000560639.1_1_15:83207600-83209179:-|nuORF;ENST00000559273.1_1_15:83208730-83209179:-|nuORF 24.99096001346401 0.505407273373304 3 {[DS]|[MA]|[CV]|TT}{I|L}{I|L}AYNH{I|L}[PS] 11 -1 + 43.733 0.0 0.0 3.5594 3.5594 69.683 0.0 0.0 0.0 0.0 0.0 0.0 0.9691001300805624 0 0.0 0.0 0.566901560044258 0.2614393726401688 {[DS]|[MA]|[CV]|TT}{I|L}{I|L}AYNH{I|L}[PS];{[DS]|[MA]|[CV]|TT}{I|L}{I|L}A[HN]Y{I|L}[PS];{[DS]|[MA]|[CV]|TT}{I|L}{I|L}AY[HQ]V[PS];{[TV]|[{I|L}S]}T[HQ]YA{I|L}{I|L}[PS];[EP]VS{[CT]|[{M(Oxidation (M))|F}G]}{I|L}A{I|L}{I|L}[PS];{[QN]|[E{I|L}]|[KN]}KM{I|L}DA{I|L}{I|L}[PS];[EP]VSA[{M(Oxidation (M))|F}V]A{I|L}{I|L}[PS];{[DS]|[MA]|[CV]|TT}{I|L}{I|L}AYNHPS{I|L};{[QN]|[E{I|L}]|[KN]}TGC{I|L}{I|L}A{I|L}{I|L}[PS];{[DS]|[MA]|[CV]|TT}{I|L}{I|L}A[HN]YPS{I|L} 3.5594;3.4806;3.3326;3.3232;3.2446;3.2244;3.2227;3.1747;3.1091;3.0958 -;-;-;-;-;-;-;-;-;- 3582 + 1 1.178 165557.8 1.0 9680 5593 15259 HBL1_DMSO_200M_050219_1,15275 HBL1_DMSO_200M_050219_1,15275,FQPPPYALPLS False False RVCEEIAIIPS 74.995409 615.330798327923 2995544.0 15259.0 ENSG00000182774|ENST00000647841|RPS17;;ENST00000560639.1_1_15:83207600-83209179:-|nuORF;;ENST00000559273.1_1_15:83208730-83209179:-|nuORF 1.5625293850898745 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15276 75.007 658.0 551370.0 25 0 79807.0 + -1 VQLDCFSQLD 10 237 612.783324262164 1223.552095591128 2 612.7838012576103 MULTI CID FTMS 0 0 0 15259 205427.328125 0.0474389718716699 -3 0.2161483764648437 17 Carbamidomethyl (C) _VQLDC(Carbamidomethyl (C))FSQLD_ REV__ENSG00000153157|ENST00000283141|SYCP2L 29.84058131909904 0.2982332456971691 3 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VSE[DN]TSV 11 -1 + 61.859 0.0 0.0 5.0557 5.0557 75.745 0.0 0.0 0.0 1.953107396214513 9.451013976501308 1.953107396214513 1.888120033298684 0 0.7134679910804405 2.0 1.483735849160995 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VSE[DN]TSV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}WE[DN]TSV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}SVE[DN]TSV;{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[YG][DN]{[WT]|[RM]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[YG][DN]{[WT]|[RM]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VSE[DN]STV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[YG]E[DN]{[WT]|[RM]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VSE[DN]{[WT]|[RM]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}WE[DN]STV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}WE[DN]{[WT]|[RM]} 5.0557;4.9014;4.5877;4.2542;4.202;4.037;3.956;3.9179;3.8827;3.7672 -;-;-;-;-;-;-;-;-;- 19144 + 1 1.178 256090.7 1.0 9681 5593 15259 HBL1_DMSO_200M_050219_1,15276 HBL1_DMSO_200M_050219_1,15276,VQLDCFSQLD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15277 75.022 800.0 458460.0 25 0 97702.0 9101 FFLCLQCFTR 10 234 426.5444892380877 1276.6116383144629 3 426.5447570681572 MULTI CID FTMS 0 0 0 15259 175717.765625 0.5041293020455231 -1 0.051788330078125 18 Unmodified _FFLCLQCFTR_ ENSG00000276234|ENST00000615182|TADA2A;nc|ENSG00000276234|O75478-2|TADA2A;nc|ENSG00000276234|O75478|TADA2A 41.8396318013385 0.1381409678234242 3 {[TV]|[{I|L}S]}{I|L}[KS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}E 10 8 + 58.414 0.0 0.0 4.5757 4.5757 80.806 0.0 0.0 0.0 7.247145153209274 7.247145153209274 7.247145153209274 7.247145153209274 0 0.7059771852360797 1.154901959985743 0.6952349168877847 0.0 {[TV]|[{I|L}S]}{I|L}[KS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}E;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[MD]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}T{I|L};{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]{I|L}[MD]{I|L}{M(Oxidation (M))|F}E;{[TV]|[{I|L}S]}{I|L}[Y{M(Oxidation (M))|F}][MD]{I|L}{M(Oxidation (M))|F}E;[{I|L}T]V[KS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}E;{[TV]|[{I|L}S]}{I|L}[KS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}[CG]{M(Oxidation (M))|F}E;{[TV]|[{I|L}S]}{I|L}[KS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}C(Carbamidomethyl (C))E{M(Oxidation (M))|F};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[MD][Y{M(Oxidation (M))|F}]VPV;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[MD]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}T{I|L};{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}]{I|L}[MD]{M(Oxidation (M))|F}{I|L}E 4.5757;4.0081;3.9523;3.9523;3.935;3.8579;3.8304;3.8088;3.543;3.4873 -;-;-;-;-;-;-;-;-;- 3360 1 1.178 290970.3 0.949999988079071 9682 5593 15259 HBL1_DMSO_200M_050219_1,15277 HBL1_DMSO_200M_050219_1,15277,FFLCLQCFTR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15278 75.033 633.0 365350.0 25 0 34718.0 22971 LSFVPPDLPE 10 230 557.2956199572142 0 557.2950317263603 PEAK CID FTMS 0 0 0 15259 148136.03125 0.2797309754909001 5 -0.385223388671875 19 Unmodified _LSFVPPDLPE_ ENSG00000132000|ENST00000588872|PODNL1 36.12702656103203 0.1519005573994188 3 {I|L}MSQS 5 9 16.759 0.0 0.0 1.5063 0.0 0.0 113.09531598689075 450.23679529361567 563.3321112805064 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.0 {I|L}MSQS 1.5063 - 1304 + 1 1.178 175112.8 1.0 9683 5593 15259 HBL1_DMSO_200M_050219_1,15278 HBL1_DMSO_200M_050219_1,15278,LSFVPPDLPE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15279 75.047 800.0 377510.0 25 0 16876.0 + 16989 KIWERIWSA 9 312 396.888698031517 1187.644264694751 3 397.2227661013603 MULTI CID FTMS 0 0 0 15259 108494.1875 0.5217516495907328 -1 0.051788330078125 20 Unmodified _KIWERIWSA_ ENST00000532383.5_1_11:10825070-10825157:-|nuORF 47.594388314883695 0.0456443387682827 3 {[TV]|[{I|L}S]}VPSTWS{I|L}KA 11 7 + 47.717 0.0 0.0 4.0178 4.0178 69.612 0.0 0.0 0.0 0.2722286839486401 15.070623213458042 0.2722286839486401 0.2722286839486401 0 0.0 0.0915149811213502 1.27049241580378 0.0 {[TV]|[{I|L}S]}VPSTWS{I|L}KA;[WE]R{I|L}WS{I|L}KA;[K{I|L}]DD{I|L}WS{I|L}KA;{[TV]|[{I|L}S]}VPSTK{I|L}SGEA;{[TV]|[{I|L}S]}VPST{[DA]|[EG]}S{I|L}KA;[WE][VG]{I|L}WS{I|L}KA;[K{I|L}]DD{I|L}K{I|L}SGEA;[K{I|L}]DD{I|L}{[DA]|[EG]}S{I|L}KA;{[TV]|[{I|L}S]}VPSTW{I|L}SKA;[WE]R{I|L}W{I|L}SKA 4.0178;3.9949;3.9707;3.2507;3.2492;3.2196;3.2005;3.199;3.1903;3.1674 -;-;-;-;-;-;-;-;-;- 11328 1 1.178 227915.0 0.7300000190734863 9684 5593 15259 HBL1_DMSO_200M_050219_1,15279 HBL1_DMSO_200M_050219_1,15279,KIWERIWSA True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15281 75.051 3.5 14655000.0 25 0 2611500.0 + 30155 NIPVRFIEA 9 70 529.8038251856889 1057.5930974381777 2 529.8043701052666 MULTI CID FTMS 0 0 0 15280 13591775.0 1.0 0 0.0 1 Unmodified _QVPFLKQQA_ ENSG00000095585|ENST00000224337|BLNK;nc|ENSG00000095585|Q8WV28-2|BLNK 11.640296217721598 0.521594087909532 3 {[QV]|[N{I|L}]|[RA]|[KV]}A{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 6 5 39.983 0.0 0.0 3.7806 0.0 0.0 0.0 349.1995943658813 349.1995943658813 27.764706236572465 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}A{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 3.7806 - 45 + 1 1.18 43657.9 1.0 9685 5594 15280 HBL1_DMSO_200M_050219_1,15281 HBL1_DMSO_200M_050219_1,15281,QVPFLKQQA False False NIPVRFIEA 75.051256 529.804370105267 125699664.0 15280.0 ENSG00000095585|ENST00000224337|BLNK;;nc|ENSG00000095585|Q8WV28-2|BLNK 0.7074471563100815 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15282 75.052 6.9 9423100.0 25 0 1373100.0 + 18784 LAPLAKVI 8 74 412.7839829502703 823.5534129673406 2 412.7838317751884 MULTI CID FTMS 0 0 0 15280 9054440.0 1.0 0 0.0 2 Unmodified _LAPLAKVI_ ENSG00000105679|ENST00000222286|GAPDHS;ENSG00000111640|ENST00000229239|GAPDH;ENST00000423411.2_1_6:135940529-135940997:-|nuORF;ENST00000455134.1_1_10:93426952-93427153:-|nuORF;ENST00000515281.1_1_11:88141588-88141981:-|nuORF;nc|ENSG00000111640|P04406-2|GAPDH 40.44857923139169 0.2267865117615937 3 [{I|L}A]P{I|L}AKV{I|L} 8 0 + 60.61 0.0 0.0 7.3596 7.3596 89.201 0.0 0.0 0.0 41.9136756363956 13.214562785677655 13.214562785677655 6.7609125905568135 0 0.8494850021680094 2.0 0.0 0.0 + + [{I|L}A]P{I|L}AKV{I|L};[{I|L}A]{I|L}PAKV{I|L} 7.3596;6.5387 +;- + 174 + 1 1.18 58802.4 1.0 9686 5594 15280 HBL1_DMSO_200M_050219_1,15282 HBL1_DMSO_200M_050219_1,15282,LAPLAKVI False True LAPLAKVI 75.052436 412.783831775188 312525600.0 15280.0 ENST00000455134.1_1_10:93426952-93427153:-|nuORF;;ENSG00000105679|ENST00000222286|GAPDHS;;nc|ENSG00000111640|P04406-2|GAPDH;;ENSG00000111640|ENST00000229239|GAPDH;;ENST00000515281.1_1_11:88141588-88141981:-|nuORF;;ENST00000423411.2_1_6:135940529-135940997:-|nuORF 3.9890812238057456 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15283 75.054 11.0 4520300.0 25 0 563430.0 + 5552 DMLQQLHSV 9 84 535.7683618087831 1069.522170684366 2 535.7687866091728 MULTI CID FTMS 0 0 0 15280 4148730.0 0.8568774831236404 -2 0.1677627563476562 3 Unmodified _DMLQQLHSV_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000562407.1_1_16:23695226-23699079:+|nuORF 92.4914307365334 0.0139747738690111 3 [MD]{I|L}QQ{I|L}HSV 9 0 + 85.693 0.0 0.0 8.0123 8.0123 93.188 0.0 0.0 0.0 27.14764271519251 24.046827071550386 24.046827071550386 9.208187539523747 0 0.7134679910804405 2.0 2.055462187404089 0.8494850021680094 + + [MD]{I|L}QQ{I|L}HSV;[MD]{I|L}[AG]Q{I|L}HSV;[MD]{I|L}Q[AG]{I|L}HSV;[MD]{I|L}QQVV[HT];[MD]{I|L}[AG][AG]{I|L}HSV;[MD]{I|L}Q{[NV]|[RG]}{I|L}[HT];[MD]{I|L}[AG]QVV[HT];[MD]{I|L}Q[AG]VV[HT];[MD]{I|L}Q[HV][QT]V;[MD]{I|L}[AG]{[NV]|[RG]}{I|L}[HT] 8.0123;7.1513;6.8245;5.7639;5.5002;5.0137;4.9029;4.5762;4.3676;4.1527 +;-;-;-;-;-;-;-;-;- + 558 + 1 1.18 45458.6 1.0 9687 5594 15280 HBL1_DMSO_200M_050219_1,15283 HBL1_DMSO_200M_050219_1,15283,DMLQQLHSV True True DMLQQLHSV 75.053615 535.768786609173 39578268.0 15280.0 ENST00000562407.1_1_16:23695226-23699079:+|nuORF;;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;;ENSG00000166851|ENST00000300093|PLK1 8.040966987609863 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15284 75.055 27.0 1645500.0 25 0 132130.0 74 AAFPSEGVVV 10 73 488.2613472483728 974.5081415635456 2 488.2610046267509 MULTI CID FTMS 0 0 0 15280 1833083.0 0.0706168963749939 -3 0.237030029296875 4 Unmodified _AAFPSEGVVV_ ENSG00000145721|ENST00000274382|LIX1 10.823927491677226 0.6659270209832991 3 V 1 9 15.485 0.0 0.0 1.589 0.0 0.0 857.4285421146184 0.0 857.4285421146184 0.0 -10.70370911637767 -10.70370911637767 0.0 0 0.0 0.0 0.0 0.0 + V 1.589 + + 78 + 1 1.18 39457.3 1.0 9688 5594 15280 HBL1_DMSO_200M_050219_1,15284 HBL1_DMSO_200M_050219_1,15284,AAFPSEGVVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15285 75.056 24.0 903970.0 25 0 53807.0 + + 22995 MPYSGMTGAQVI 12 48 627.796699929451 1253.578846925702 2 627.7971069216728 MULTI CID FTMS 0 0 0 15280 1691087.25 0.8610236462520992 1 -0.1256103515625 5 Unmodified _LSHCQYYEVL_ ENSG00000111816|ENST00000606080|FRK;nc|ENSG00000111816|P42685-2|FRK 10.073929032068715 0.6785112666868882 3 TGAQ[{I|L}V] 6 -1 38.901 0.0 0.0 3.1032 0.0 0.0 666.2496815412125 0.0 666.2496815412125 0.0 22.412581433031843 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 TGAQ[{I|L}V] 3.1032 - 36 1 1.18 25317.1 1.0 9689 5594 15280 HBL1_DMSO_200M_050219_1,15285 HBL1_DMSO_200M_050219_1,15285,LSHCQYYEVL False False MPYSGMTGAQVI 75.055971 627.797106921673 39575024.0 15280.0 ENSG00000111816|ENST00000606080|FRK;;nc|ENSG00000111816|P42685-2|FRK 5.808295885721843 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15286 75.057 40.0 1147600.0 25 0 228820.0 + 12952 HAFWGGSVV 9 77 480.240336811635 958.46612069007 2 480.2404968142509 MULTI CID FTMS 0 0 0 15280 1308047.75 0.5135742777781813 -2 0.1677627563476562 6 Unmodified _HAFWGGSVV_ ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17 52.69307289633392 0.0344652456970635 3 [HA]{M(Oxidation (M))|F}WGGSVV 9 0 + 61.304 0.0 0.0 6.396 6.396 86.091 0.0 0.0 0.0 17.147642715192504 45.81932811061336 17.147642715192504 6.478174818886373 0 0.7429928190999391 1.0 0.5 0.0 + + [HA]{M(Oxidation (M))|F}WGGSVV;[HA]{M(Oxidation (M))|F}WNSVV;[HA]{M(Oxidation (M))|F}NWSVV;[HA]{M(Oxidation (M))|F}GGWSVV 6.396;5.7202;5.4061;4.4397 +;-;-;- + 78 1 1.18 43309.3 1.0 9690 5594 15280 HBL1_DMSO_200M_050219_1,15286 HBL1_DMSO_200M_050219_1,15286,HAFWGGSVV True True HAFWGGSVV 75.05715 480.240496814251 17455866.0 15280.0 nc|ENSG00000132466|O75179-4|ANKRD17;;nc|ENSG00000132466|O75179-7|ANKRD17;;nc|ENSG00000132466|O75179-6|ANKRD17;;nc|ENSG00000132466|O75179-2|ANKRD17;;ENSG00000132466|ENST00000358602|ANKRD17 7.842469692230225 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15287 75.058 45.0 1301300.0 25 0 159720.0 + 23051 LSLCRFHLV 9 81 544.3097582509859 1086.6049635687716 2 544.3095580935478 MULTI CID FTMS 0 0 0 15280 1300077.5 0.3570553396605718 -3 0.237030029296875 7 Unmodified _LSLCRFHLV_ REV__ENST00000256707.7_2_2:8869433-8869517:-|nuORF 11.640296217721598 0.521594087909532 3 {[TV]|[{I|L}S]}{I|L}G 4 -1 24.781 0.0 0.0 2.2806 0.0 0.0 0.0 713.3611640905091 713.3611640905091 15.632690016340971 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[TV]|[{I|L}S]}{I|L}G 2.2806 - 63 1 1.18 50365.4 1.0 9691 5594 15280 HBL1_DMSO_200M_050219_1,15287 HBL1_DMSO_200M_050219_1,15287,LSLCRFHLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15288 75.06 27.0 1109300.0 25 0 88132.0 + 26719 NYVPEVSAL 9 60 496.2589510490028 0 496.2587158083916 PEAK CID FTMS 0 0 0 15280 1267259.0 0.7901261278000061 -2 0.1677627563476562 8 Unmodified _NYVPEVSAL_ ENSG00000182774|ENST00000647841|RPS17;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF 20.453626601364224 0.1969592619112565 3 SV 2 8 8.3155 0.0 0.0 0.83952 0.0 0.0 578.3077341363389 223.07276331119377 801.3804974475327 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SV 0.83952 - 21 + 1 1.18 28981.7 1.0 9692 5594 15280 HBL1_DMSO_200M_050219_1,15288 HBL1_DMSO_200M_050219_1,15288,NYVPEVSAL False True NYVPEVSAL 75.059577 496.258715808392 14206992.0 15280.0 ENSG00000182774|ENST00000647841|RPS17;;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;;ENST00000561068.5_3_15:83205554-83208094:-|nuORF 7.485683123270671 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15289 75.061 50.0 1273200.0 25 0 112170.0 + 32623 SAYEVIKL 8 93 461.7659059232856 921.5172589133712 2 461.7657958865166 MULTI CID FTMS 0 0 0 15280 916630.125 0.6704973401986464 -2 0.1677627563476562 9 Unmodified _SAYEVIKL_ ENSG00000111716|ENST00000350669|LDHB;ENSG00000134333|ENST00000422447|LDHA;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;ENST00000542765.4_1_12:21788478-21790169:-|nuORF;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA 52.268347100219714 0.1285778651304833 3 {[SA]|[TG]}YEV{I|L}K{I|L} 8 0 + 70.667 0.0 0.0 7.6685 7.6685 97.069 0.0 0.0 0.0 44.98055982231925 11.40978057358332 11.40978057358332 70.66692218072937 0 1.048455006504028 2.0 0.3807196863200844 0.0 + + {[SA]|[TG]}YEV{I|L}K{I|L} 7.6685 + + 107 + 1 1.18 55010.7 1.0 9693 5594 15280 HBL1_DMSO_200M_050219_1,15289 HBL1_DMSO_200M_050219_1,15289,SAYEVIKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15290 75.066 261.0 655110.0 25 0 97499.0 + 27127 PFLWIHVLIG 10 176 597.8561389632442 1193.6977249932884 2 597.8567382693291 MULTI CID FTMS 0 0 0 15280 829797.4375 0.3141104218132154 2 -0.1543197631835937 10 Unmodified _PFLWIHVLIG_ REV__ENSG00000139915|ENST00000399232|MDGA2;REV__nc|ENSG00000139915|Q7Z553-2|MDGA2;REV__nc|ENSG00000139915|Q7Z553|MDGA2 1.844237919475145 0.7181058121064529 3 P{M(Oxidation (M))|F}{M(Oxidation (M))|F}H 4 -1 12.652 0.0 0.0 1.0599 0.0 0.0 147.25993327564476 515.1814669244749 662.4414002001197 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F}{M(Oxidation (M))|F}H 1.0599 - 407 + 1 1.18 127564.4 1.0 9694 5594 15280 HBL1_DMSO_200M_050219_1,15290 HBL1_DMSO_200M_050219_1,15290,PFLWIHVLIG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15291 75.068 97.0 774420.0 25 0 70407.0 + 6122 DSYINVQEI 9 113 540.764015728368 1079.513478523536 2 540.7640869021416 MULTI CID FTMS 0 0 0 15280 309511.53125 0.1054983940214804 -3 0.237030029296875 11 Unmodified _DSYINVQEI_ ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX 36.12702656103203 0.0967173616627612 3 {[DS]|[MA]|[CV]|TT}Y{I|L}NV 6 3 23.051 0.0 0.0 2.1353 0.0 0.0 0.0 385.1720227952735 385.1720227952735 2.88141495020038 0.0 0.0 0.0 0 0.0 0.0 1.086696871556164 0.0 + {[DS]|[MA]|[CV]|TT}Y{I|L}NV 2.1353 + + 418 1 1.18 63888.2 1.0 9695 5594 15280 HBL1_DMSO_200M_050219_1,15291 HBL1_DMSO_200M_050219_1,15291,DSYINVQEI True True DSYINVQEI 75.067863 540.764086902142 22061242.0 15280.0 ENSG00000107290|ENST00000224140|SETX;;nc|ENSG00000107290|Q7Z333-4|SETX;;nc|ENSG00000107290|Q7Z333-3|SETX 4.429537932078044 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15292 75.079 646.0 583150.0 25 0 62850.0 + 243 AAVYSGDPSF 10 251 338.49206106273925 1012.4543537884178 3 338.4918395876884 MULTI CID FTMS 0 0 0 15280 281327.5625 0.3127548075226115 -2 0.1677627563476562 12 Unmodified _AAVYSGDPSF_ REV__ENSG00000085978|ENST00000392017|ATG16L1;REV__ENST00000479942.5_1_2:234198871-234202993:+|nuORF;REV__nc|ENSG00000085978|Q676U5-2|ATG16L1;REV__nc|ENSG00000085978|Q676U5-4|ATG16L1;REV__nc|ENSG00000085978|Q676U5-5|ATG16L1 26.88365393820708 0.3646707531412818 3 AAVKVE 6 -1 56.417 0.0 0.0 5.5723 0.0 0.0 0.0 412.0839327447876 412.0839327447876 23.2306842758112 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 1.2440840204505517 0.0 AAVKVE 5.5723 - 867 + 1 1.18 298654.9 1.0 9696 5594 15280 HBL1_DMSO_200M_050219_1,15292 HBL1_DMSO_200M_050219_1,15292,AAVYSGDPSF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15293 75.09 640.0 311850.0 25 0 19632.0 + 30125 QVLDKFIHV 9 219 366.8819479062677 1097.6240143190032 3 366.8816100955009 MULTI CID FTMS 0 0 0 15280 271369.59375 0.7641031042351021 2 -0.1543197631835937 13 Unmodified _QVLDKFIHV_ ENSG00000171777|ENST00000615439|RASGRP4;ENST00000588404.5_1_19:38907704-38910742:-|nuORF;ENST00000592322.5_1_19:38901850-38916815:-|nuORF;nc|ENSG00000171777|Q8TDF6-2|RASGRP4;nc|ENSG00000171777|Q8TDF6-5|RASGRP4;nc|ENSG00000171777|Q8TDF6-8|RASGRP4;nc|ENSG00000171777|Q8TDF6-9|RASGRP4 39.957323273325 0.0756908302845263 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DK{M(Oxidation (M))|F}{I|L}HV 9 0 + 56.009 0.0 0.0 5.1028 5.1028 80.11 0.0 0.0 0.0 17.147642715192504 4.771212547196626 4.771212547196626 4.771212547196626 0 0.1237125054200235 1.0 0.3252574989159953 0.3807196863200844 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DK{M(Oxidation (M))|F}{I|L}HV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DK{M(Oxidation (M))|F}{I|L}VH;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V[SG]{M(Oxidation (M))|F}{I|L}HV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V[SG]{M(Oxidation (M))|F}{I|L}VH;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Y{I|L}N{I|L}HV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DK{M(Oxidation (M))|F}[HV]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Y{I|L}N{I|L}VH;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V[YQ]{I|L}HV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Y{I|L}GG{I|L}HV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[HT][HK]HV 5.1028;4.6681;3.8768;3.4422;2.9987;2.7931;2.564;2.5299;2.1597;2.1093 +;-;-;-;-;-;-;-;-;- + 551 + 1 1.18 159853.5 1.0 9697 5594 15280 HBL1_DMSO_200M_050219_1,15293 HBL1_DMSO_200M_050219_1,15293,QVLDKFIHV True True QVLDKFIHV 75.090244 366.881610095501 2703171.25 15280.0 nc|ENSG00000171777|Q8TDF6-2|RASGRP4;;ENSG00000171777|ENST00000615439|RASGRP4;;ENST00000588404.5_1_19:38907704-38910742:-|nuORF;;nc|ENSG00000171777|Q8TDF6-9|RASGRP4;;nc|ENSG00000171777|Q8TDF6-8|RASGRP4;;ENST00000592322.5_1_19:38901850-38916815:-|nuORF;;nc|ENSG00000171777|Q8TDF6-5|RASGRP4 6.025652249654134 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15294 75.099 493.0 212170.0 25 0 13753.0 + 45584 YVFENTVATV 10 169 571.7906884975515 0 571.7905761599541 PEAK CID FTMS 0 0 0 15280 209260.609375 1.0 0 0.0 14 Unmodified _YVFENTVATV_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 20.453626601364224 0.2946171403104198 3 {I|L}E 2 9 9.464 0.0 0.0 0.82903 0.0 0.0 169.05414203240915 727.3640356460933 896.4181776785024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E 0.82903 - 232 + 1 1.18 86201.9 1.0 9698 5594 15280 HBL1_DMSO_200M_050219_1,15294 HBL1_DMSO_200M_050219_1,15294,YVFENTVATV False True YVFENTVATV 75.098961 571.790576159954 2512978.25 15280.0 nc|ENSG00000090861|P49588-2|AARS1;;ENSG00000090861|ENST00000261772|AARS1 3.845593293507894 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15295 75.113 800.0 454490.0 25 0 42029.0 57 AADISHASDL 10 242 333.8291173151305 998.4655225455916 3 333.8290588259697 MULTI CID FTMS 0 0 0 15280 171955.65625 0.1203657095008434 -3 0.237030029296875 15 Unmodified _AADISHASDL_ ENSG00000167967|ENST00000301727|E4F1;ENST00000569796.1_1_16:2278422-2280215:+|nuORF 19.256988751693697 0.5244284437930726 3 {NN|[MP]|[D{I|L}]|[EV]}S{M(Oxidation (M))|F}VYQQ 8 7 + 35.592 0.0 0.0 3.5647 3.5647 76.421 0.0 0.0 0.0 5.722026863425455 5.722026863425455 5.722026863425455 5.722026863425455 0 0.7059771852360797 0.619788758288394 0.1923877696554315 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}S{M(Oxidation (M))|F}VYQQ;HHYV{M(Oxidation (M))|F}[TP]V;{NN|[MP]|[D{I|L}]|[EV]}S{M(Oxidation (M))|F}[YN]AAV;{[ES]|[DT]|[{I|L}C]}EH[RN]EV;[{I|L}A]DYVYQQ;HHAH[NS][TP]V;{[TV]|[{I|L}S]}D{M(Oxidation (M))|F}VYQQ;HHYV{M(Oxidation (M))|F}VTP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VEVYQQ;[KC][KC]VYQQ 3.5647;2.9916;2.4388;2.1082;2.0741;2.05;1.6704;1.5819;1.5517;1.4763 -;-;-;-;-;-;-;-;-;- 1497 1 1.18 283823.8 0.9900000095367432 9699 5594 15280 HBL1_DMSO_200M_050219_1,15295 HBL1_DMSO_200M_050219_1,15295,AADISHASDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15296 75.123 566.0 137530.0 25 0 26650.0 -1 0 61 1162.797886063532 3485.371828790796 3 1163.458544909954 MULTI CID FTMS 0 0 0 15280 166236.84375 0.0014281238013549 35 -2.492988586425781 16 3 E 1 -1 4.6041 0.0 0.0 0.1321 0.0 0.0 2829.142525275124 524.1627901666624 3353.3053154417867 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.1321 - 38 + 1 1.18 65044.2 1.0 9700 5594 15280 HBL1_DMSO_200M_050219_1,15296 HBL1_DMSO_200M_050219_1,15296, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15297 75.138 800.0 388860.0 25 0 31523.0 + 17827 KQLDDLKVEL 10 234 400.8994160702367 1199.67641881091 3 400.8994323611259 MULTI CID FTMS 0 0 0 15280 164986.40625 0.0007983109167706 50 -3.7651596069335938 17 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 28.181266145913348 0.3355154477840527 3 {I|L}{M(Oxidation (M))|F}VK{I|L}D 6 8 36.909 0.0 0.0 3.0765 0.0 0.0 0.0 481.2441079079217 481.2441079079217 14.819180417465812 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.4793036574208875 0.0 {I|L}{M(Oxidation (M))|F}VK{I|L}D 3.0765 - 2780 + 1 1.18 232306.4 0.9800000190734864 9701 5594 15280 HBL1_DMSO_200M_050219_1,15297 HBL1_DMSO_200M_050219_1,15297,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15298 75.148 594.0 197810.0 25 0 8892.9 + 19597 LGAASVLAV 9 126 800.4878949993484 799.4806185327484 1 800.4899780154228 MULTI CID FTMS 0 0 0 15280 146017.4375 0.0047257473831709 28 -2.1162185668945312 18 Unmodified _LGAASVLAV_ REV__ENSG00000132182|ENST00000254508|NUP210 44.40701690623563 0.0526327925666318 3 [TP]KSVVAV 8 -1 + 54.018 0.0 0.0 6.7567 6.7567 86.685 0.0 0.0 0.0 6.012969751618087 14.024174299985006 6.012969751618087 6.012969751618087 0 0.4423877696554315 1.3010299956639813 2.274227503252014 0.0 [TP]KSVVAV;[Q{I|L}]ATVVAV;{[VA]|[{I|L}G]}AATVVAV;[TP]KVSVAV;[TP]KSVAVV;{[NV]|[RG]}VTVVAV;[Q{I|L}]AS{I|L}VAV;[Q{I|L}]A{I|L}SVAV;{[VA]|[{I|L}G]}AAS{I|L}VAV;{[VA]|[{I|L}G]}AA{I|L}SVAV 6.7567;6.0046;5.9406;5.911;5.8112;5.3087;5.2117;5.1589;5.1477;5.0949 -;-;-;-;-;-;-;-;-;- 2594 1 1.18 82287.4 1.0 9702 5594 15280 HBL1_DMSO_200M_050219_1,15298 HBL1_DMSO_200M_050219_1,15298,LGAASVLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15299 75.162 759.0 300940.0 25 0 31742.0 + 28407 PSQLPSLSV 9 209 464.2617927843156 926.5090326354313 2 464.2610046267509 MULTI CID FTMS 0 0 0 15280 153255.28125 0.3840069889369237 9 -0.6370849609375 19 Unmodified _PSQLPSLSV_ ENSG00000130035|ENST00000252318|GALNT8 32.78568957990786 0.1150597335874693 3 [EP]{I|L}[RN]{I|L}SV 8 4 + 21.41 0.0 0.0 2.3108 2.3108 70.204 0.0 0.0 0.0 1.9937454063331543 4.129650584971561 1.9937454063331543 2.756987880070909 0 0.2408427761594597 1.154901959985743 0.3807196863200844 0.0 [EP]{I|L}[RN]{I|L}SV;[EP][KA][PS]{I|L}SV;[TP]N{I|L}[PS]{I|L}SV;[PS]Q{I|L}[PS]{I|L}SV;[QP]S{I|L}[PS]{I|L}SV;[TP]VQ[PS]{I|L}SV;[PS]{I|L}Q[PS]{I|L}SV;{[TV]|[{I|L}S]}PQ[PS]{I|L}SV;{[QS]|[NT]}P{I|L}[PS]{I|L}SV;[{I|L}P]SQ[PS]{I|L}SV 2.3108;2.0132;1.8269;1.7054;1.675;1.5152;1.3937;1.213;1.1714;1.065 -;-;-;+;-;-;-;-;-;- + 785 1 1.18 171602.5 1.0 9703 5594 15280 HBL1_DMSO_200M_050219_1,15299 HBL1_DMSO_200M_050219_1,15299,PSQLPSLSV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15300 75.173 571.0 414460.0 25 0 41627.0 + 17299 HVIENIYLPAA 11 216 619.8692092130163 1237.7238654928326 2 619.8699828982353 MULTI CID FTMS 0 0 0 15280 138795.5 0.2170146443704773 -2 0.1677627563476562 20 Unmodified _KLRRQPSEPK_ ENSG00000198836|ENST00000361510|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313|OPA1;nc|ENSG00000198836|O60313-11|OPA1 7.608950283845883 0.6914406445242895 3 [VS]A{I|L}{[DA]|[EG]}{I|L}AQ{I|L} 10 10 35.142 0.0 0.0 2.8392 0.0 0.0 0.0 253.1703330932485 253.1703330932485 24.86432273728964 0.0 0.0 0.0 0 0.3252574989159953 0.6020599913279624 0.9291746928241126 0.0 [VS]A{I|L}{[DA]|[EG]}{I|L}AQ{I|L} 2.8392 - 2014 1 1.18 171206.3 1.0 9704 5594 15280 HBL1_DMSO_200M_050219_1,15300 HBL1_DMSO_200M_050219_1,15300,KLRRQPSEPK False False HVIENIYLPAA 75.172764 619.869982898235 513714.90625 15280.0 ENSG00000198836|ENST00000361510|OPA1;;nc|ENSG00000198836|O60313-9|OPA1;;nc|ENSG00000198836|O60313-2|OPA1;;nc|ENSG00000198836|O60313-13|OPA1;;nc|ENSG00000198836|O60313|OPA1;;nc|ENSG00000198836|O60313-11|OPA1 2.0912618041038518 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15302 75.177 1.8 20183000.0 25 0 2337600.0 + 29404 QLDTKEPI 8 69 472.258785161171 942.503017389142 2 472.2587158083916 MULTI CID FTMS 0 0 0 15301 19242360.0 0.5507882404531252 -2 0.2415847778320312 1 Unmodified _QLDTKEPI_ REV__ENSG00000166004|ENST00000325212|CEP295;REV__nc|ENSG00000166004|Q9C0D2-2|CEP295;REV__nc|ENSG00000166004|Q9C0D2-3|CEP295;REV__nc|ENSG00000166004|Q9C0D2-4|CEP295 9.347437153973935 0.7675937258251505 3 [EP]{I|L}D 4 -1 26.031 0.0 0.0 2.7619 0.0 0.0 0.0 485.26330726634825 485.26330726634825 11.42667503568731 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [EP]{I|L}D 2.7619 - 59 1 1.18 34761.0 1.0 9705 5595 15301 HBL1_DMSO_200M_050219_1,15302 HBL1_DMSO_200M_050219_1,15302,QLDTKEPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15303 75.178 2.3 11723000.0 25 0 1315100.0 + 3730 DAFRVNVI 8 53 467.261603560774 932.508654188348 2 467.2616760134697 MULTI CID FTMS 0 0 0 15301 21385094.0 0.7150842625375271 -2 0.2415847778320312 2 Unmodified _DAFRVNVI_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 25.399314129420983 0.5099049743284904 3 WV{I|L} 3 6 26.682 0.0 0.0 2.8614 0.0 0.0 516.2814198224625 0.0 516.2814198224625 0.0 11.197887582883936 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 WV{I|L} 2.8614 - 11 1 1.18 29478.4 1.0 9706 5595 15301 HBL1_DMSO_200M_050219_1,15303 HBL1_DMSO_200M_050219_1,15303,DAFRVNVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15304 75.179 11.0 2843300.0 25 0 351700.0 + 12454 GTYTGFIKV 9 56 493.2717199318526 984.5288869305052 2 493.2716247439384 MULTI CID FTMS 0 0 0 15301 3711837.25 0.8007202591755197 1 -0.0287094116210937 3 Unmodified _GTYTGFIKV_ ENSG00000266094|ENST00000579436|RASSF5;nc|ENSG00000266094|Q8WWW0-2|RASSF5;nc|ENSG00000266094|Q8WWW0-3|RASSF5 19.256988751693697 0.3154191944385105 3 {[SA]|[TG]}{M(Oxidation (M))|F}Y 4 6 16.655 0.0 0.0 1.6917 0.0 0.0 0.0 513.3042830088833 513.3042830088833 0.4575749056067444 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[SA]|[TG]}{M(Oxidation (M))|F}Y 1.6917 - 30 1 1.18 29116.5 1.0 9707 5595 15301 HBL1_DMSO_200M_050219_1,15304 HBL1_DMSO_200M_050219_1,15304,GTYTGFIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15305 75.18 19.0 2563500.0 25 0 221580.0 + 41330 VPILAPRI 8 63 439.79465879941694 877.5747646656339 2 439.7947570681572 MULTI CID FTMS 0 0 0 15301 2271164.0 0.1571972814240007 3 -0.1436386108398437 4 Unmodified _VPILAPRI_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 30.22481116460888 0.4082965392918993 3 VP{I|L}{I|L}A[RP]{I|L} 8 0 + 58.893 0.0 0.0 6.7109 6.7109 94.343 0.0 0.0 0.0 31.446020033459305 3.4602447005850223 3.4602447005850223 58.89329498242624 0 0.3494850021680094 1.3979400086720375 0.0 0.3494850021680094 + + VP{I|L}{I|L}A[RP]{I|L} 6.7109 + + 38 + 1 1.18 44001.5 1.0 9708 5595 15301 HBL1_DMSO_200M_050219_1,15305 HBL1_DMSO_200M_050219_1,15305,VPILAPRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15306 75.182 15.0 1763300.0 25 0 150040.0 + -1 LPPNLYPTV 9 54 507.23512281058487 1012.4556926879698 2 507.2345764040947 MULTI CID FTMS 0 0 0 15301 2235910.25 1.0 0 0.0 5 Carbamidomethyl (C) _MC(Carbamidomethyl (C))FMKPTV_ ENSG00000010017|ENST00000011619|RANBP9;nc|ENSG00000010017|Q96S59-3|RANBP9 9.347437153973935 0.7675937258251505 3 [{I|L}P]S 3 -1 18.416 0.0 0.0 1.819 0.0 0.0 0.0 712.2652074186916 712.2652074186916 5.652165235758599 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P]S 1.819 - 54 1 1.18 29597.1 1.0 9709 5595 15301 HBL1_DMSO_200M_050219_1,15306 HBL1_DMSO_200M_050219_1,15306,MCFMKPTV False False LPPNLYPTV 75.181576 507.234576404095 201061760.0 15301.0 ENSG00000010017|ENST00000011619|RANBP9;;nc|ENSG00000010017|Q96S59-3|RANBP9 6.652754465738933 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15307 75.183 29.0 1749300.0 25 0 232480.0 + 22133 LPPQPKVK 8 66 453.7921119878436 905.5696710424872 2 453.7922851443291 MULTI CID FTMS 0 0 0 15301 2117192.75 0.0330563114288669 27 -1.9906082153320312 6 Unmodified _LPPQPKVK_ REV__ENSG00000204463|ENST00000676615|BAG6;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6 13.50788311687929 0.7113601687236069 3 {I|L}PP 3 -1 50.445 0.0 0.0 5.5706 0.0 0.0 0.0 595.3572713021782 595.3572713021782 43.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PP 5.5706 + + 12 + 1 1.18 46063.9 1.0 9710 5595 15301 HBL1_DMSO_200M_050219_1,15307 HBL1_DMSO_200M_050219_1,15307,LPPQPKVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15308 75.184 17.0 975520.0 25 0 84896.0 + 26576 NVLRSALFML 10 45 582.3353301673142 1162.6561074014282 2 582.3350097537041 MULTI CID FTMS 0 0 0 15301 1941110.25 0.3700753320765595 5 -0.3269882202148437 7 Unmodified _NVLRSALFML_ REV__nc|ENSG00000261716|Q6DN03|H2BC20P 0.6976657623105312 0.723409379185497 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.18 21484.0 1.0 9711 5595 15301 HBL1_DMSO_200M_050219_1,15308 HBL1_DMSO_200M_050219_1,15308,NVLRSALFML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15309 75.185 18.0 1817100.0 25 0 353860.0 + -1 TYALCTIVV 9 57 520.2782689739805 1038.541985014761 2 520.2784911990166 MULTI CID FTMS 0 0 0 15301 1897606.25 0.0275201259111225 10 -0.6724700927734375 8 Carbamidomethyl (C) _TYALC(Carbamidomethyl (C))TIVV_ REV__ENSG00000233670|ENST00000580256|PIRT 18.13498045792455 0.3457906370836843 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 -1 22.676 0.0 0.0 2.1835 0.0 0.0 0.0 695.3070661517328 695.3070661517328 3.735899786366232 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 2.1835 - 32 1 1.18 32128.2 1.0 9712 5595 15301 HBL1_DMSO_200M_050219_1,15309 HBL1_DMSO_200M_050219_1,15309,TYALCTIVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15310 75.186 17.0 2122400.0 25 0 266920.0 + 1315 AIVKEIVNI 9 73 499.8157754119609 997.6169978907218 2 499.8159057497978 MULTI CID FTMS 0 0 0 15301 1683904.0 0.2440319447911462 3 -0.1436386108398437 9 Unmodified _AIVKEIVNI_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 22.65808497894818 0.2428932432760099 3 {NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]A{I|L}VN{I|L} 9 3 + 25.071 0.0 0.0 2.513 2.513 81.276 0.0 0.0 0.0 4.541740317262825 7.988861539154616 4.541740317262825 22.95880017344075 0 0.6435078169319297 0.0 0.5 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]A{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]V[{I|L}A]N{I|L} 2.513;0.21169 -;- 95 1 1.18 30492.6 1.0 9713 5595 15301 HBL1_DMSO_200M_050219_1,15310 HBL1_DMSO_200M_050219_1,15310,AIVKEIVNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15311 75.187 25.0 550830.0 25 0 44872.0 -1 0 39 560.32203148338 559.3147550167799 1 560.3223144412041 MULTI CID FTMS 0 0 0 15301 1555535.25 0.4849211413110951 -2 0.2415847778320312 10 3 N 1 -1 0.48455 0.0 0.0 0.086633 0.0 0.0 317.1874489638487 125.06133447818594 442.2487834420346 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.086633 - 3 + 1 1.18 16129.3 1.0 9714 5595 15301 HBL1_DMSO_200M_050219_1,15311 HBL1_DMSO_200M_050219_1,15311, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15312 75.189 36.0 1720800.0 25 0 192280.0 + 4678 DAYVLPKLYVK 11 79 654.8817637143413 1307.7489744954826 2 654.8820068240166 MULTI CID FTMS 0 0 0 15301 1524867.0 0.2373492331238926 3 -0.1436386108398437 11 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 40.23920728925047 0.2087110615831976 3 {[DA]|[EG]}YV{I|L}[KP]{I|L}[YV]K 11 0 + 59.085 0.0 0.0 4.518 4.518 87.107 0.0 0.0 0.0 29.744015820250063 8.053948010664307 8.053948010664307 59.08471681611349 0 1.5 1.3010299956639813 0.0 0.2614393726401688 + + {[DA]|[EG]}YV{I|L}[KP]{I|L}[YV]K 4.518 + + 91 + 1 1.18 49962.0 1.0 9715 5595 15301 HBL1_DMSO_200M_050219_1,15312 HBL1_DMSO_200M_050219_1,15312,DAYVLPKLYVK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15313 75.19 25.0 1304300.0 25 0 400340.0 -1 CLICWDPRA 9 53 595.7733697380628 1189.5321865429255 2 595.7743408083916 MULTI CID FTMS 0 0 0 15301 1374393.25 0.6913164823694002 -1 0.1256103515625 12 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))LIC(Carbamidomethyl (C))WDPRA_ ENST00000449900.6_1_22:30229586-30234180:-|nuORF;ENST00000495681.5_1_22:30230466-30234183:-|nuORF 6.723162845929126 0.6799819581413107 3 YY{I|L}WV 5 -1 28.416 0.0 0.0 2.3889 0.0 0.0 0.0 462.1320149943505 462.1320149943505 21.42667503568731 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 YY{I|L}WV 2.3889 - 106 1 1.18 32982.4 1.0 9716 5595 15301 HBL1_DMSO_200M_050219_1,15313 HBL1_DMSO_200M_050219_1,15313,CLICWDPRA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15314 75.191 26.0 1474800.0 25 0 303910.0 + 45721 YYFDYKEQL 9 54 634.7953867901278 1267.5762206470556 2 634.7955810427666 MULTI CID FTMS 0 0 0 15301 1370482.625 0.4286776386178231 1 -0.0287094116210937 13 Unmodified _YYFDYKEQL_ ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF 26.268140514670165 0.1969607489560049 3 YY{M(Oxidation (M))|F}[Q{I|L}]KY 7 5 54.825 0.0 0.0 4.3252 0.0 0.0 0.0 259.0723055475219 259.0723055475219 42.83555101754352 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 YY{M(Oxidation (M))|F}[Q{I|L}]KY 4.3252 - 70 + 1 1.18 35617.2 1.0 9717 5595 15301 HBL1_DMSO_200M_050219_1,15314 HBL1_DMSO_200M_050219_1,15314,YYFDYKEQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15315 75.192 21.0 1612600.0 25 0 138230.0 + 950 AFLEQAVSY 9 68 514.2587498116648 1026.5029466901294 2 514.2581664919853 MULTI CID FTMS 0 0 0 15301 878118.75 0.3159438404814506 -2 0.2415847778320312 14 Unmodified _AFLEQAVSY_ ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693|LPIN1 23.1484247019978 0.2366544122328345 3 SY 2 7 24.024 0.0 0.0 2.3403 0.0 0.0 758.396742113096 0.0 758.396742113096 0.0 11.805234507957891 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + SY 2.3403 + + 41 + 1 1.18 33607.2 1.0 9718 5595 15301 HBL1_DMSO_200M_050219_1,15315 HBL1_DMSO_200M_050219_1,15315,AFLEQAVSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15316 75.193 36.0 956460.0 25 0 75874.0 + 32093 RVLPSIVNEV 10 75 563.3352749241639 1124.6559969151276 2 563.3355590701103 MULTI CID FTMS 0 0 0 15301 812701.75 0.5408821178015023 -2 0.2415847778320312 15 Unmodified _RVLPSIVNEV_ ENSG00000215021|ENST00000535923|PHB2;ENST00000543465.5_1_12:7077022-7079730:-|nuORF;ENST00000544888.5_1_12:7077022-7079603:-|nuORF;nc|ENSG00000215021|Q99623-2|PHB2 6.630372943996041 0.695967137280542 3 {I|L}VNEV 5 5 20.63 0.0 0.0 1.8343 0.0 0.0 552.3380604474625 0.0 552.3380604474625 0.0 0.7082530717588718 0.0 0.0 0 0.0796896906561032 0.0 0.0 0.0 + {I|L}VNEV 1.8343 + + 30 1 1.18 33337.6 1.0 9719 5595 15301 HBL1_DMSO_200M_050219_1,15316 HBL1_DMSO_200M_050219_1,15316,RVLPSIVNEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15317 75.195 77.0 863270.0 25 0 141940.0 + 24273 MAPRTLLL 8 88 457.7781512369343 913.5417495406684 2 457.7787963747978 MULTI CID FTMS 0 0 0 15301 721828.625 0.0760339116969289 -6 0.5448532104492188 16 Unmodified _MAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206341|P01893|HLA-H;nc|ENSG00000206503|P04439-2|HLA-A 29.081581746732265 0.4323690340403521 3 MA 2 6 40.445 0.0 0.0 4.4273 0.0 0.0 0.0 708.442322375632 708.442322375632 15.38364391835536 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + MA 4.4273 + + 44 + 1 1.18 57877.9 1.0 9720 5595 15301 HBL1_DMSO_200M_050219_1,15317 HBL1_DMSO_200M_050219_1,15317,MAPRTLLL False True MAPRTLLL 75.195124 457.778796374798 333115360.0 15301.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206341|P01893|HLA-H;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 1.0273540373891592 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15318 75.197 90.0 588680.0 25 0 161600.0 -1 CIFLDEQCCFY 11 58 777.8067631544496 1553.5989733756992 2 777.8077880740166 MULTI CID FTMS 0 0 0 15301 640111.9375 0.0525972877610423 7 -0.4383392333984375 17 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))IFLDEQC(Carbamidomethyl (C))C(Carbamidomethyl (C))FY_ HERVFH21-int_dup68|chrX:64848898-64850686:+|1.1618635505066113|0.1868304972504996|2.64|46.0|9|1|sense 1.3295316138638542 0.8688751186870782 3 DYYYYY 6 -1 32.224 0.0 0.0 2.0741 0.0 0.0 605.2469349591812 0.0 605.2469349591812 0.0 16.73902187720806 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 DYYYYY 2.0741 - 125 1 1.18 42584.0 1.0 9721 5595 15301 HBL1_DMSO_200M_050219_1,15318 HBL1_DMSO_200M_050219_1,15318,CIFLDEQCCFY False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 15319 75.199 72.0 501860.0 25 0 83161.0 + 45958 YYYNGIDGDYY 11 56 703.2827151770417 1404.5508774208834 2 703.7839843630791 MULTI CID FTMS 0 0 0 15301 623282.0 0.0762179448612727 5 -0.3269882202148437 18 Unmodified _YYYNGIDGDYY_ REV__ENSG00000196591|ENST00000519065|HDAC2;REV__ENST00000520170.1_1_6:114281018-114292096:-|nuORF;REV__ENST00000521233.1_1_6:114279792-114292096:-|nuORF 6.723162845929126 0.8434276150410019 3 Y 1 -1 15.485 0.0 0.0 1.1025 0.0 0.0 1223.4765804011552 0.0 1223.4765804011552 0.0 3.701813447471221 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1025 + + 16 + 1 1.18 34320.0 1.0 9722 5595 15301 HBL1_DMSO_200M_050219_1,15319 HBL1_DMSO_200M_050219_1,15319,YYYNGIDGDYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15320 75.2 32.0 1316400.0 25 0 130170.0 -1 VSTALREGGI 10 68 522.7880441731782 1043.5615354131562 2 522.7874023318291 MULTI CID FTMS 0 0 0 15301 597178.9375 0.578995160246101 1 -0.0287094116210937 19 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VSTALREGGI_ ENST00000524492.5_1_8:145581065-145581518:-|nuORF 8.745405648335112 0.6861838735306406 3 {I|L} 1 -1 12.474 0.0 0.0 1.1954 0.0 0.0 912.4667763572952 0.0 912.4667763572952 0.0 -9.208187539523747 -9.208187539523747 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1954 + + 17 + 1 1.18 40314.9 1.0 9723 5595 15301 HBL1_DMSO_200M_050219_1,15320 HBL1_DMSO_200M_050219_1,15320,VSTALREGGI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15321 75.201 49.0 1108100.0 25 0 102840.0 + -1 LSVPNNDCMV 10 91 574.7592916255289 1147.5040303178578 2 574.7599365115166 MULTI CID FTMS 0 0 0 15301 469156.90625 0.5494343063329306 -2 0.2415847778320312 20 Carbamidomethyl (C) _LSVPNNDC(Carbamidomethyl (C))MV_ REV__ENSG00000069122|ENST00000283296|ADGRF5;REV__nc|ENSG00000069122|Q8IZF2-2|ADGRF5 18.1463463914782 0.5430639438673815 3 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VW 6 -1 41.872 0.0 0.0 3.649 0.0 0.0 0.0 413.0965670221313 413.0965670221313 29.10777778612239 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VW 3.649 - 41 + 1 1.18 47403.8 1.0 9724 5595 15301 HBL1_DMSO_200M_050219_1,15321 HBL1_DMSO_200M_050219_1,15321,LSVPNNDCMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15323 75.206 11.0 8553800.0 25 0 939290.0 + 25601 NFLNMSRSM 9 97 550.2544715783698 1098.4943902235395 2 550.2550536990166 MULTI CID FTMS 0 0 0 15322 5494032.5 0.9624790433428344 -1 0.0287094116210937 1 Unmodified _NFLNMSRSM_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 49.55428908609986 0.0413471690215031 3 NHHCN{I|L}SR 8 6 47.37 0.0 0.0 4.3123 0.0 0.0 119.07413680244296 0.0 119.07413680244296 0.0 28.665827977365623 0.0 0.0 0 1.0924778212679485 0.0 0.0 1.555462187404089 NHHCN{I|L}SR 4.3123 - 498 1 1.18 75512.4 1.0 9725 5596 15322 HBL1_DMSO_200M_050219_1,15323 HBL1_DMSO_200M_050219_1,15323,NFLNMSRSM True True NFLNMSRSM 75.20557 550.255053699017 138129960.0 15322.0 ENSG00000137959|ENST00000370751|IFI44L;;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 6.078009605407715 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15324 75.207 28.0 1594400.0 25 0 370590.0 + 37619 TLLGNRLMIF 10 66 589.342962126194 1176.671371319188 2 589.3431884646416 MULTI CID FTMS 0 0 0 15322 2926489.5 0.6028997387425091 6 -0.4096298217773437 2 Unmodified _TLLGNRLMIF_ REV__ENSG00000180919|ENST00000316529|OR56B4 1.844237919475145 0.7181058121064529 3 W 1 -1 1.1092 0.0 0.0 0.09427 0.0 0.0 878.5383279615693 109.03009210758046 987.5684200691496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.09427 - 3 + 1 1.18 40097.5 1.0 9726 5596 15322 HBL1_DMSO_200M_050219_1,15324 HBL1_DMSO_200M_050219_1,15324,TLLGNRLMIF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15325 75.208 23.0 2762700.0 25 0 559420.0 + 10284 FRKQIAVV 8 79 480.8013543239512 959.5881557147025 2 480.8013793826103 MULTI CID FTMS 0 0 0 15322 9022699.0 0.6733176571375694 -1 0.0287094116210937 3 Unmodified _FRKQIAVV_ REV__ENSG00000177398|ENST00000408910|UMODL1;REV__ENST00000400423.6_1_21:43540943-43557727:+|nuORF;REV__nc|ENSG00000177398|Q5DID0-2|UMODL1;REV__nc|ENSG00000177398|Q5DID0-3|UMODL1;REV__nc|ENSG00000177398|Q5DID0-4|UMODL1 2.889219685676258 0.8067950007271085 3 V 1 -1 12.474 0.0 0.0 1.3 0.0 0.0 842.5084341954627 0.0 842.5084341954627 0.0 10.255762612236904 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3 + + 11 + 1 1.18 55684.8 1.0 9727 5596 15322 HBL1_DMSO_200M_050219_1,15325 HBL1_DMSO_200M_050219_1,15325,FRKQIAVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15326 75.21 82.0 640910.0 25 0 40258.0 24159 LYRLWKKF 8 89 577.3487213588974 1152.6828897845946 2 577.3488647341728 MULTI CID FTMS 0 0 0 15322 3768546.5 0.8155009485748439 -5 0.3913497924804687 4 Unmodified _LYRLWKKF_ ENSG00000168016|ENST00000645898|TRANK1;nc|ENSG00000168016|O15050|TRANK1 2.889219685676258 0.8067950007271085 3 [Y{I|L}][{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YP 8 5 11.092 0.0 0.0 0.96231 0.0 0.0 0.0 110.16504245476963 110.16504245476963 0.7138339111272192 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [Y{I|L}][{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YP 0.96231 - 57 1 1.18 43567.4 1.0 9728 5596 15322 HBL1_DMSO_200M_050219_1,15326 HBL1_DMSO_200M_050219_1,15326,LYRLWKKF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15327 75.211 21.0 1536000.0 25 0 241240.0 -1 VINFHMKKV 9 50 566.3222542769303 1130.6299556206604 2 566.3225585818291 MULTI CID FTMS 0 0 0 15322 2511289.75 0.5078348398609005 6 -0.4096298217773437 5 Oxidation (M) _VINFHM(Oxidation (M))KKV_ ENST00000498116.1_1_4:15732587-15732905:-|nuORF 1.844237919475145 0.850302753031785 3 V 1 -1 10.089 0.0 0.0 0.8923 0.0 0.0 1013.550211213237 0.0 1013.550211213237 0.0 10.088643834802156 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.8923 + + 2 + 1 1.18 32157.1 1.0 9729 5596 15322 HBL1_DMSO_200M_050219_1,15327 HBL1_DMSO_200M_050219_1,15327,VINFHMKKV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15328 75.212 35.0 2901200.0 25 0 430640.0 21293 LPEGLGPYCA 10 119 510.24842506977336 1018.4822972063467 2 510.2489196658134 MULTI CID FTMS 0 0 0 15322 2323357.0 0.9064424382402972 -1 0.0287094116210937 6 Unmodified _LPEGLGPYCA_ ENSG00000159363|ENST00000326735|ATP13A2;nc|ENSG00000159363|Q9NQ11-2|ATP13A2;nc|ENSG00000159363|Q9NQ11-3|ATP13A2 20.453626601364224 0.5043500229302764 3 [{I|L}P]AEVGC{I|L}{[MS]|[{M(Oxidation (M))|F}A]} 10 6 + 46.461 0.0 0.0 4.5618 4.5618 75.872 0.0 0.0 0.0 9.35759103745312 4.259687322722812 4.259687322722812 3.0102999566398125 0 0.3252574989159953 1.6989700043360187 0.2396518287104437 0.0 [{I|L}P]AEVGC{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}P]AD{I|L}GC{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}P]AEVC(Carbamidomethyl (C)){I|L}{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}P]AD{I|L}C(Carbamidomethyl (C)){I|L}{[MS]|[{M(Oxidation (M))|F}A]};[PA]E{I|L}VGC{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[PA]EV{I|L}GC{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[PA]E{I|L}VC(Carbamidomethyl (C)){I|L}{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}P]ADG{I|L}C{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[PA]{I|L}EVGC{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[PA]EV{I|L}C(Carbamidomethyl (C)){I|L}{[MS]|[{M(Oxidation (M))|F}A]} 4.5618;4.2662;4.216;3.9205;3.643;3.3475;3.2972;3.1205;3.0519;3.0017 -;-;-;-;-;-;-;-;-;- 993 1 1.18 81523.0 1.0 9730 5596 15322 HBL1_DMSO_200M_050219_1,15328 HBL1_DMSO_200M_050219_1,15328,LPEGLGPYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15329 75.214 85.0 607570.0 25 0 57809.0 + 5716 DPLIKHTLSL 10 90 568.8354306481845 1135.6563083631688 2 568.8358642458916 MULTI CID FTMS 0 0 0 15322 2306422.0 0.7583960720561466 -1 0.0287094116210937 7 Unmodified _DPLIKHTLSL_ REV__ENSG00000153922|ENST00000614616|CHD1;REV__ENST00000508756.2_1_5:98204705-98207835:-|nuORF;REV__nc|ENSG00000153922|O14646-2|CHD1 14.838274106304384 0.5985701837916485 3 {I|L} 1 -1 12.764 0.0 0.0 1.124 0.0 0.0 1004.5611678375814 0.0 1004.5611678375814 0.0 2.5831489800166807 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.124 + + 113 + 1 1.18 45550.9 1.0 9731 5596 15322 HBL1_DMSO_200M_050219_1,15329 HBL1_DMSO_200M_050219_1,15329,DPLIKHTLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15330 75.217 125.0 1173100.0 25 0 177200.0 26001 NLVLAKNRRQ 10 146 606.3695885146241 1210.724624096048 2 606.3698608279228 MULTI CID FTMS 0 0 0 15322 2265958.25 0.9043587121511072 -1 0.0287094116210937 8 Unmodified _NLVLAKNRRQ_ ENSG00000121236|ENST00000380097|TRIM6;ENST00000481603.1_1_11:5631742-5632569:+|nuORF;nc|ENSG00000121236|Q9C030-3|TRIM6;nc|ENSG00000121236|Q9C030|TRIM6 3.2813086475875832 0.7114585191678878 3 M 1 10 9.2082 0.0 0.0 0.76055 0.0 0.0 1061.672559131984 0.0 1061.672559131984 0.0 2.218487496163561 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.76055 - 126 + 1 1.18 108465.1 1.0 9732 5596 15322 HBL1_DMSO_200M_050219_1,15330 HBL1_DMSO_200M_050219_1,15330,NLVLAKNRRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15331 75.218 41.0 1632800.0 25 0 216900.0 + 938 AFIITGQTY 9 77 507.2688344391345 1012.523115945069 2 507.2691223025322 MULTI CID FTMS 0 0 0 15322 2053183.375 0.5240965231675346 -1 0.0287094116210937 9 Unmodified _AFIITGQTY_ ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL 19.438996006549623 0.310492472477042 3 [{I|L}P]NPY{I|L} 6 8 23.901 0.0 0.0 2.3605 0.0 0.0 0.0 312.116840880869 312.116840880869 5.242275032520137 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [{I|L}P]NPY{I|L} 2.3605 - 223 1 1.18 57688.2 1.0 9733 5596 15322 HBL1_DMSO_200M_050219_1,15331 HBL1_DMSO_200M_050219_1,15331,AFIITGQTY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15332 75.219 50.0 2034100.0 25 0 211570.0 + 25288 NAAIIMKI 8 105 437.2655817671766 872.5166106011533 2 437.2649108767509 MULTI CID FTMS 0 0 0 15322 2562987.0 1.0 0 0.0 10 Unmodified _NAAIIMKI_ ENSG00000197045|ENST00000358056|GMFB;ENST00000554163.5_1_14:54948056-54950476:-|nuORF;ENST00000554682.1_1_14:54948855-54955663:-|nuORF 46.020951573049366 0.1579632664462935 3 NAA{I|L}{I|L}M{I|L}K 8 2 + 83.806 0.0 0.0 9.605 9.605 86.331 0.0 0.0 0.0 29.26213785839081 2.0597718523607966 2.0597718523607966 2.0597718523607966 0 1.0994850021680094 2.0 0.0 0.4119543704721594 NAA{I|L}{I|L}M{I|L}K;NAA{I|L}{I|L}MK{I|L};NAA{I|L}{I|L}KM{I|L};[YV]K{I|L}{I|L}[HT];[SG]KP{I|L}M{I|L}K;N[RV]{I|L}M{I|L}K;[SG]KP{I|L}MK{I|L};N[RV]{I|L}MK{I|L};[SG]KP{I|L}KM{I|L};N[RV]{I|L}KM{I|L} 9.605;9.369;8.5093;4.7302;3.9592;3.9146;3.7231;3.6785;2.8635;2.8189 -;+;-;-;-;-;-;-;-;- + 299 + 1 1.18 86166.3 1.0 9734 5596 15322 HBL1_DMSO_200M_050219_1,15332 HBL1_DMSO_200M_050219_1,15332,NAAIIMKI False True NAAIIMKI 75.219118 437.264910876751 8274255.5 15322.0 ENSG00000197045|ENST00000358056|GMFB;;ENST00000554682.1_1_14:54948855-54955663:-|nuORF;;ENST00000554163.5_1_14:54948056-54950476:-|nuORF 4.63073221842448 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15333 75.22 29.0 2375500.0 25 0 247060.0 + -1 AIVKEIVNI 9 94 500.2396764639317 998.4647999946636 2 500.2397643923759 MULTI CID FTMS 0 0 0 15322 2167340.25 0.9362808012648822 -1 0.0287094116210937 11 Carbamidomethyl (C) _AIC(Carbamidomethyl (C))NHTGQV_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 16.942295170755138 0.3780752226737986 3 EYRC(Carbamidomethyl (C))QV 6 -1 41.407 0.0 0.0 4.1471 0.0 0.0 145.063751265951 0.0 145.063751265951 0.0 4.732427371743881 0.0 0.0 0 0.5 0.0 0.0 0.8807196863200843 EYRC(Carbamidomethyl (C))QV 4.1471 - 424 + 1 1.18 56319.9 1.0 9735 5596 15322 HBL1_DMSO_200M_050219_1,15333 HBL1_DMSO_200M_050219_1,15333,AICNHTGQV False False AIVKEIVNI 75.220297 500.239764392376 48927132.0 15322.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 0.9679669737815856 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15334 75.224 166.0 562500.0 25 0 61505.0 42444 VTFSREVIVV 10 108 574.836125945584 1147.6576989579678 2 574.8359863162041 MULTI CID FTMS 0 0 0 15322 1512802.375 0.91339142297638 -1 0.0287094116210937 12 Unmodified _VTFSREVIVV_ ENSG00000237651|ENST00000432605|C2orf74 10.823927491677226 0.6659270209832991 3 V 1 9 13.495 0.0 0.0 1.1759 0.0 0.0 1030.5780689914625 0.0 1030.5780689914625 0.0 0.5533525087868796 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1759 + + 91 + 1 1.18 74108.9 1.0 9736 5596 15322 HBL1_DMSO_200M_050219_1,15334 HBL1_DMSO_200M_050219_1,15334,VTFSREVIVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15335 75.227 173.0 364660.0 25 0 42420.0 1338 AKHIPFRAKVL 11 96 640.4011867136545 1278.787820494109 2 640.4014770388603 MULTI CID FTMS 0 0 0 15322 1422093.0 1.0 0 0.0 13 Unmodified _AKHIPFRAKVL_ ENST00000552738.5_1_12:62929405-62930957:+|nuORF 5.296884461304476 0.8501568894076437 3 [{I|L}P]AKV{I|L} 6 5 28.849 0.0 0.0 2.256 0.0 0.0 0.0 654.3438867385026 654.3438867385026 18.25349332229268 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [{I|L}P]AKV{I|L} 2.256 - 169 1 1.18 53970.4 1.0 9737 5596 15322 HBL1_DMSO_200M_050219_1,15335 HBL1_DMSO_200M_050219_1,15335,AKHIPFRAKVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15336 75.23 175.0 919930.0 25 0 58615.0 39024 TVTIEGMIKL 10 154 552.821416112731 1103.6282792922618 2 552.8224365115166 MULTI CID FTMS 0 0 0 15322 1356642.125 0.6659286709997401 -1 0.0287094116210937 14 Unmodified _TVTIEGMIKL_ ENSG00000135503|ENST00000257963|ACVR1B;ENST00000563121.1_1_12:52377838-52385653:+|nuORF;nc|ENSG00000135503|P36896-2|ACVR1B;nc|ENSG00000135503|P36896-3|ACVR1B;nc|ENSG00000135503|P36896-4|ACVR1B;nc|ENSG00000135503|P36896-5|ACVR1B 10.073929032068715 0.6785112666868882 3 {NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]Y{I|L}T 7 7 19.97 0.0 0.0 1.8095 0.0 0.0 0.0 254.14387922806185 254.14387922806185 8.187742507420651 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]Y{I|L}T 1.8095 - 459 1 1.18 125800.6 1.0 9738 5596 15322 HBL1_DMSO_200M_050219_1,15336 HBL1_DMSO_200M_050219_1,15336,TVTIEGMIKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15337 75.233 111.0 1239700.0 25 0 299450.0 + 19999 LILKDMVKV 9 111 353.559532809788 1057.656769029564 3 353.5593444705009 MULTI CID FTMS 0 0 0 15322 1297426.125 1.0 0 0.0 15 Unmodified _LILKDMVKV_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000535804.1_1_12:6637788-6638275:+|nuORF 35.61225514009592 0.0995432151795903 3 {I|L}{I|L}{I|L}KDMVKV 9 0 + 81.717 0.0 0.0 7.7262 7.7262 82.689 0.0 0.0 0.0 36.47817481888638 1.249387366082999 1.249387366082999 1.249387366082999 0 0.3494850021680094 2.0 0.0 0.5649093276264391 + + {I|L}{I|L}{I|L}KDMVKV;{I|L}{I|L}{I|L}KDMVVK;{I|L}{I|L}{I|L}KV[MD]KV;{I|L}{I|L}{I|L}KV[MD]VK;{I|L}{I|L}{I|L}VK[MD]KV;{I|L}{I|L}{I|L}VK[MD]VK;{I|L}{I|L}{I|L}V[SG]MVKV;{I|L}{I|L}V{I|L}K[MD]KV;{I|L}{I|L}{I|L}V[SG]MVVK;{I|L}{I|L}V{I|L}K[MD]VK 7.7262;7.6081;7.087;6.9689;6.9193;6.8012;6.688;6.6576;6.5698;6.5395 +;-;-;-;-;-;-;-;-;- + 888 + 1 1.18 115232.0 1.0 9739 5596 15322 HBL1_DMSO_200M_050219_1,15337 HBL1_DMSO_200M_050219_1,15337,LILKDMVKV True True LILKDMVKV 75.232722 353.559344470501 9479089.0 15322.0 ENST00000535804.1_1_12:6637788-6638275:+|nuORF;;ENSG00000010292|ENST00000315579|NCAPD2 4.95070759455363 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15338 75.235 105.0 393230.0 25 0 31408.0 39275 VACEKRML 8 80 475.252702713416 948.490852493632 2 475.2529785037041 MULTI CID FTMS 0 0 0 15322 1306239.75 0.9041690915028032 -1 0.0287094116210937 16 Unmodified _VACEKRML_ ENSG00000100084|ENST00000263208|HIRA;ENST00000509549.5_1_22:19341546-19435194:-|nuORF 11.114462752807354 0.7467182956244686 3 NG{I|L} 3 7 13.645 0.0 0.0 1.4386 0.0 0.0 646.3283596731227 0.0 646.3283596731227 0.0 2.8077070953820584 0.0 0.0 0 0.0 0.0 0.0 0.0 NG{I|L} 1.4386 - 62 + 1 1.18 38565.5 1.0 9740 5596 15322 HBL1_DMSO_200M_050219_1,15338 HBL1_DMSO_200M_050219_1,15338,VACEKRML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15339 75.239 220.0 327420.0 25 0 77580.0 + 31228 RLRPLRPQLS 10 75 618.3879008553955 1234.761248777591 2 618.3880493044853 MULTI CID FTMS 0 0 0 15322 965918.625 0.7179308582142697 -1 0.0287094116210937 17 Unmodified _RLRPLRPQLS_ REV__ENST00000439321.1_1_2:122407632-122408176:+|nuORF 1.6526216038709556 0.7189921496796233 3 {I|L} 1 -1 10.837 0.0 0.0 0.8777 0.0 0.0 1103.6661692871596 0.0 1103.6661692871596 0.0 6.171692991338318 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.8777 + + 52 + 1 1.18 59356.7 1.0 9741 5596 15322 HBL1_DMSO_200M_050219_1,15339 HBL1_DMSO_200M_050219_1,15339,RLRPLRPQLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15340 75.244 241.0 759280.0 25 0 103240.0 -1 GVLCICVSSL 10 173 525.7702693323132 1049.5259857314263 2 525.7708007693291 MULTI CID FTMS 0 0 0 15322 906609.625 1.0 0 0.0 18 Carbamidomethyl (C) _GVLC(Carbamidomethyl (C))ICVSSL_ ENST00000397885.2_1_9:2804184-2804304:-|nuORF 37.97399986684836 0.1789611706409123 3 [VG]{I|L}DAS 6 -1 45.748 0.0 0.0 4.3589 0.0 0.0 0.0 504.22214685611567 504.22214685611567 7.896154426879903 0.0 0.0 0.0 0 0.8391368308784531 1.6989700043360187 0.2742275032520141 0.0 [VG]{I|L}DAS 4.3589 - 2178 + 1 1.18 139507.3 1.0 9742 5596 15322 HBL1_DMSO_200M_050219_1,15340 HBL1_DMSO_200M_050219_1,15340,GVLCICVSSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15341 75.249 280.0 498620.0 25 0 89558.0 + 9986 FPIDHFTHI 9 143 376.19429728322586 1125.5610624498777 3 376.1942626833916 MULTI CID FTMS 0 0 0 15322 831351.1875 0.7954094197542735 2 -0.11492919921875 19 Unmodified _FPIDHFTHI_ ENSG00000155363|ENST00000369645|MOV10;ENST00000468624.5_1_1:113217534-113241292:+|nuORF;ENST00000496577.5_1_1:113231344-113241292:+|nuORF;nc|ENSG00000155363|Q9HCE1-2|MOV10 49.55428908609986 0.0413471690215031 3 {M(Oxidation (M))|F}P{I|L}DH{M(Oxidation (M))|F}TH{I|L} 9 0 + 66.067 0.0 0.0 5.8697 5.8697 83.364 0.0 0.0 0.0 12.180475292681264 7.569619513137056 7.569619513137056 5.268024924119672 0 0.3494850021680094 0.0 1.066901560044258 0.0 + + {M(Oxidation (M))|F}P{I|L}DH{M(Oxidation (M))|F}TH{I|L};{M(Oxidation (M))|F}{I|L}PDH{M(Oxidation (M))|F}TH{I|L};{M(Oxidation (M))|F}P{I|L}DH{M(Oxidation (M))|F}T{I|L}H;[{I|L}P]D[QT]VD{I|L}PE;{M(Oxidation (M))|F}{I|L}PDH{M(Oxidation (M))|F}T{I|L}H;[{I|L}P]D[QT]VDP{I|L}E;{M(Oxidation (M))|F}{I|L}[WY]{M(Oxidation (M))|F}TH{I|L};{NN|[MP]|[D{I|L}]|[EV]}P[QT]VD{I|L}PE;{NN|[MP]|[D{I|L}]|[EV]}P[QT]VDP{I|L}E;{M(Oxidation (M))|F}P[QT][WP]TH{I|L} 5.8697;5.4017;5.1972;4.7876;4.7292;4.3195;3.2861;3.2484;2.7804;2.6208 +;-;-;-;-;-;-;-;-;- + 1062 + 1 1.18 118390.5 1.0 9743 5596 15322 HBL1_DMSO_200M_050219_1,15341 HBL1_DMSO_200M_050219_1,15341,FPIDHFTHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15342 75.254 256.0 675560.0 25 0 55923.0 + 39172 TYPENWRAF 9 178 592.2805508823599 1182.5465488315197 2 592.2808715701103 MULTI CID FTMS 0 0 0 15322 721887.75 1.0 0 0.0 20 Unmodified _TYPENWRAF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 36.12702656103203 0.0967173616627612 3 [YT]PENGR{M(Oxidation (M))|F}S{I|L} 10 4 + 67.056 0.0 0.0 5.6704 5.6704 80.132 0.0 0.0 0.0 16.653379982531327 3.222192947339196 3.222192947339196 3.222192947339196 0 0.3252574989159953 2.0 0.9476212463643424 0.7396518287104438 [YT]PENGR{M(Oxidation (M))|F}S{I|L};[YT]PENGR{M(Oxidation (M))|F}TV;[YT]PEGGGR{M(Oxidation (M))|F}S{I|L};[YT]PEGGGR{M(Oxidation (M))|F}TV;[YT]PDQGR{M(Oxidation (M))|F}S{I|L};[YT]PENWRA{M(Oxidation (M))|F};[YT]PEN[WK]{M(Oxidation (M))|F}V;[YT]PDQGR{M(Oxidation (M))|F}TV;[YT][WK]NEP[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}HRGNEP[{M(Oxidation (M))|F}V] 5.6704;5.398;4.8955;4.623;4.6222;4.5285;4.4751;4.3497;4.2622;3.9515 -;-;-;-;-;+;-;-;-;- + 2988 + 1 1.18 133900.8 1.0 9744 5596 15322 HBL1_DMSO_200M_050219_1,15342 HBL1_DMSO_200M_050219_1,15342,TYPENWRAF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15344 75.258 13.0 622690.0 25 0 129730.0 + 44392 YLVFYSCSGSV 11 26 612.783324262164 1223.552095591128 2 612.7841674685478 MULTI CID FTMS 0 0 0 15343 3784945.75 0.8740508704897838 1 -0.0628433227539062 1 Unmodified _YLVFYSCSGSV_ REV__nc|ENSG00000144036|Q9Y2D4-2|EXOC6B 1.3295316138638542 0.8688751186870782 3 N 1 -1 2.2185 0.0 0.0 0.18132 0.0 0.0 1024.4189606807747 82.06675134830311 1106.4857120290778 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.18132 - 5 + 1 1.178 15058.0 1.0 9745 5597 15343 HBL1_DMSO_200M_050219_1,15344 HBL1_DMSO_200M_050219_1,15344,YLVFYSCSGSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15345 75.26 91.0 315990.0 25 0 51653.0 22863 LSAPPCPTPAP 11 58 350.84850849122114 1049.5236960738634 3 350.8487426638603 MULTI CID FTMS 0 0 0 15343 556589.8125 0.6333844733895915 3 -0.2461929321289062 2 Unmodified _LSAPPCPTPAP_ ENST00000335793.3_1_17:71280809-71281388:-|nuORF 8.745405648335112 0.8338865417133445 3 {I|L} 1 10 11.42 0.0 0.0 1.0881 0.0 0.0 918.4284639955416 0.0 918.4284639955416 0.0 4.430283238465815 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0881 + + 25 + 1 1.178 31549.0 1.0 9746 5597 15343 HBL1_DMSO_200M_050219_1,15345 HBL1_DMSO_200M_050219_1,15345,LSAPPCPTPAP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15346 75.261 9.5 2585300.0 25 0 234990.0 + -1 TSTCMQIVV 9 56 519.751302586657 1037.4880522401138 2 519.7515746951103 MULTI CID FTMS 0 0 0 15343 3837289.0 1.0 0 0.0 3 Carbamidomethyl (C) _TSTC(Carbamidomethyl (C))MQIVV_ REV__ENST00000366641.3_1_1:231499868-231500177:-|nuORF 7.910154910731844 0.6385446671287552 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 -1 27.447 0.0 0.0 2.6456 0.0 0.0 0.0 694.2537742462263 694.2537742462263 3.290587192642249 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 2.6456 - 46 1 1.178 30477.6 1.0 9747 5597 15343 HBL1_DMSO_200M_050219_1,15346 HBL1_DMSO_200M_050219_1,15346,TSTCMQIVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15347 75.262 23.0 2651100.0 25 0 738020.0 + 30121 QVKARKLLS 9 78 521.8402797184303 1041.6660065036606 2 521.8406249880791 MULTI CID FTMS 0 0 0 15343 1998910.75 1.0 0 0.0 4 Unmodified _QVKARKLLS_ REV__ENSG00000272333|ENST00000420124|KMT2B 12.531546534597751 0.4974689918368763 3 {I|L} 1 -1 11.783 0.0 0.0 1.1311 0.0 0.0 910.570835460495 0.0 910.570835460495 0.0 -3.790457282273376 -3.790457282273376 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1311 + + 24 + 1 1.178 52262.7 1.0 9748 5597 15343 HBL1_DMSO_200M_050219_1,15347 HBL1_DMSO_200M_050219_1,15347,QVKARKLLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15348 75.263 34.0 918120.0 25 0 78153.0 + 17161 KLIKMFLI 8 65 503.3292783275992 1004.6440037219984 2 503.3302795290947 MULTI CID FTMS 0 0 0 15343 922576.5 1.0 0 0.0 5 Unmodified _KLIKMFLI_ REV__ENSG00000143199|ENST00000367851|ADCY10;REV__nc|ENSG00000143199|Q96PN6-2|ADCY10;REV__nc|ENSG00000143199|Q96PN6-4|ADCY10 5.760428011301431 0.7893668129297577 3 PG{I|L} 3 -1 14.693 0.0 0.0 1.4625 0.0 0.0 719.4745223760984 0.0 719.4745223760984 0.0 2.4742501084004704 0.0 0.0 0 0.0 0.0 0.0 0.0 PG{I|L} 1.4625 - 23 + 1 1.178 28201.0 1.0 9749 5597 15343 HBL1_DMSO_200M_050219_1,15348 HBL1_DMSO_200M_050219_1,15348,KLIKMFLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15349 75.266 149.0 494810.0 25 0 30486.0 -1 TIRDSCVNI 9 120 539.2732826644765 1076.5320123957529 2 539.2729980349541 MULTI CID FTMS 0 0 0 15343 579669.3125 1.0 0 0.0 6 Carbamidomethyl (C) _TIRDSC(Carbamidomethyl (C))VNI_ ENSG00000118997|ENST00000312428|DNAH7;nc|ENSG00000118997|Q8WXX0-2|DNAH7 11.640296217721598 0.521594087909532 3 {[VA]|[{I|L}G]}MK[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F} 7 -1 14.825 0.0 0.0 1.3771 0.0 0.0 0.0 251.0811206323341 251.0811206323341 2.060460512478532 0.0 0.0 0.0 0 0.8807196863200843 0.8860566476931632 0.0 0.0 {[VA]|[{I|L}G]}MK[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F} 1.3771 - 291 1 1.178 61598.4 1.0 9750 5597 15343 HBL1_DMSO_200M_050219_1,15349 HBL1_DMSO_200M_050219_1,15349,TIRDSCVNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15350 75.268 94.0 355960.0 25 0 40444.0 20287 LLDVPTAAV 9 65 449.7664204835597 897.5182880339195 2 449.7662536501884 MULTI CID FTMS 0 0 0 15343 520627.09375 1.0 0 0.0 7 Unmodified _LLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 8.593279151180031 0.6146971463335029 3 V 1 8 12.764 0.0 0.0 1.4222 0.0 0.0 780.4385970322578 0.0 780.4385970322578 0.0 2.16827780469286 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.4222 + + 8 + 1 1.178 34147.9 1.0 9751 5597 15343 HBL1_DMSO_200M_050219_1,15350 HBL1_DMSO_200M_050219_1,15350,LLDVPTAAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15351 75.271 113.0 461960.0 25 0 64906.0 + 5002 DGVALLKV 8 97 407.7557204678542 813.4968880025084 2 407.7554504275322 MULTI CID FTMS 0 0 0 15343 385766.09375 1.0 0 0.0 8 Unmodified _DGVALLKV_ ENSG00000165271|ENST00000297990|NOL6;ENST00000464829.5_1_9:33462182-33469499:-|nuORF;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-3|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6 20.453626601364224 0.6087503291685402 3 [DG]VA{I|L}{I|L}KV 8 0 [DG]V + + 34.562 11.637 4.2924 4.2485 4.2485 53.227 0.0 0.0 0.0 0.0 22.92419981574596 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + + [DG]VA{I|L}{I|L}KV 4.2485 + + 52 + 1 1.178 43831.5 1.0 9752 5597 15343 HBL1_DMSO_200M_050219_1,15351 HBL1_DMSO_200M_050219_1,15351,DGVALLKV False True DGVALLKV 75.270593 407.755450427532 2906847.5 15343.0 nc|ENSG00000165271|Q9H6R4-3|NOL6;;ENSG00000165271|ENST00000297990|NOL6;;nc|ENSG00000165271|Q9H6R4-4|NOL6;;nc|ENSG00000165271|Q9H6R4-2|NOL6;;ENST00000464829.5_1_9:33462182-33469499:-|nuORF 5.898239771525065 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15352 75.277 344.0 275970.0 25 0 19151.0 14104 IASLPFQVANV 11 141 579.8275023679557 1157.6404518027114 2 579.8265869021416 MULTI CID FTMS 0 0 0 15343 371345.59375 0.9327056563376224 1 -0.0628433227539062 9 Unmodified _IASLPFQVANV_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF 6.630372943996041 0.8438654038452725 3 AVA{[NV]|[RG]} 5 6 16.198 0.0 0.0 1.3992 0.0 0.0 685.3776112287125 0.0 685.3776112287125 0.0 4.93882771791494 0.0 0.0 0 0.0 0.0 0.0 0.0 AVA{[NV]|[RG]} 1.3992 - 141 1 1.178 75460.9 1.0 9753 5597 15343 HBL1_DMSO_200M_050219_1,15352 HBL1_DMSO_200M_050219_1,15352,IASLPFQVANV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15353 75.283 326.0 271630.0 25 0 29194.0 + 44797 YPMYSRDYVYV 11 121 728.3343513811346 1454.6541498290692 2 728.3378173708916 MULTI CID FTMS 0 0 0 15343 346661.46875 1.0 0 0.0 10 Unmodified _YPMYSRDYVYV_ ENSG00000084090|ENST00000337288|STARD7 34.221707139014875 0.3014076866608453 3 YPMY{[RE]|[WV]}{[QD]|[EN]|[WG]|[KD]|[RS]}GPS{I|L} 12 6 + 67.652 0.0 0.0 4.6507 4.6507 71.864 0.0 0.0 0.0 33.60151447782637 0.4575749056067479 0.4575749056067479 0.4575749056067479 0 0.7302046884880937 1.6989700043360187 0.2614393726401688 0.4247425010840047 YPMY{[RE]|[WV]}{[QD]|[EN]|[WG]|[KD]|[RS]}GPS{I|L};YPMY{[RE]|[WV]}{[QD]|[EN]|[WG]|[KD]|[RS]}GPTV;YPMY{[RE]|[WV]}ATYYV;YPMY{[RE]|[WV]}{[WN]|[YH]}PS{I|L};YPMY{[RE]|[WV]}{[WN]|[YH]}PTV;YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[RE]|[WV]}{[QD]|[EN]|[WG]|[KD]|[RS]}GPS{I|L};YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[RE]|[WV]}{[QD]|[EN]|[WG]|[KD]|[RS]}GPTV;YPMY{[RE]|[WV]}AYYS{I|L};YPMY{[RE]|[WV]}AYYTV;YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[RE]|[WV]}ATYYV 4.6507;4.6193;4.5142;4.1962;4.1647;3.9751;3.9437;3.9042;3.8728;3.8386 -;-;-;-;-;-;-;-;-;- 2547 + 1 1.178 67523.4 1.0 9754 5597 15343 HBL1_DMSO_200M_050219_1,15353 HBL1_DMSO_200M_050219_1,15353,YPMYSRDYVYV False True YPMYSRDYVYV 75.282751 728.337817370892 3939743.0 15343.0 ENSG00000084090|ENST00000337288|STARD7 7.184119860331218 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15354 75.294 642.0 285250.0 25 0 19874.0 -1 0 230 368.71587828822254 735.4172036432451 2 368.7152892947197 MULTI CID FTMS 0 0 0 15343 297408.53125 0.1484823958050682 7 -0.5483932495117188 11 3 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}K{I|L} 6 -1 + 24.113 0.0 0.0 3.2788 3.2788 79.934 0.0 0.0 0.0 6.478174818886373 9.234831456337869 6.478174818886373 9.234831456337869 0 0.3807196863200844 0.0 0.0 0.2059771852360797 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}K{I|L};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}{I|L}K 3.2788;2.0231 -;- 52 + 1 1.178 143809.3 1.0 9755 5597 15343 HBL1_DMSO_200M_050219_1,15354 HBL1_DMSO_200M_050219_1,15354, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15355 75.297 173.0 337650.0 25 0 36346.0 -1 0 108 571.3816287532779 570.3743522866779 1 571.3929931521416 MULTI CID FTMS 0 0 0 -1 0 12 3 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}{I|L} 5 -1 + 48.001 0.0 0.0 8.4157 8.4157 94.557 0.0 0.0 0.0 14.149733479708182 16.020599913279625 14.149733479708182 9.542425094393243 0 0.1803115997617927 1.3979400086720375 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V{I|L};[{I|L}V]N{I|L}{I|L};[AG]VV{I|L}{I|L};[{I|L}V]QV{I|L};[{I|L}V]GG{I|L}{I|L};[AG]V{I|L}V{I|L};[{I|L}V][AG]V{I|L};{I|L}{I|L}NV{I|L};[{I|L}T][KP]{I|L} 8.4157;6.7427;5.9349;5.1938;4.2619;4.2619;3.5207;2.5889;2.5385;1.273 -;-;-;-;-;-;-;-;-;- 107 1 1.178 52626.7 1.0 9756 5597 15343 HBL1_DMSO_200M_050219_1,15355 HBL1_DMSO_200M_050219_1,15355, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15356 75.31 718.0 255120.0 25 0 24734.0 20317 LLESKDLLL 9 190 348.5503130886796 1042.6291098662389 3 348.5500976443291 MULTI CID FTMS 0 0 0 15343 242255.9375 0.0314094562122394 12 -0.84381103515625 13 Unmodified _LLESKDLLL_ ENST00000395246.5_1_5:130727872-130728007:+|nuORF 23.78978130925829 0.2284941198415988 3 {I|L}{I|L}E[VS]K{I|L}E{I|L} 9 3 + 55.65 0.0 0.0 5.3375 5.3375 83.741 0.0 0.0 0.0 43.17561760842315 7.998329938818841 7.998329938818841 7.715299873086607 0 0.3411290632962719 1.3979400086720375 0.6382104921644451 0.805462187404089 {I|L}{I|L}E[VS]K{I|L}E{I|L};{I|L}{I|L}{[WT]|[RM]}R{I|L}E{I|L};{I|L}{I|L}E[VS][{I|L}V]TG{I|L};{I|L}{I|L}E[VS][{I|L}V]V[TA];{I|L}P[R{M(Oxidation (M))|F}]R{I|L}E{I|L};{I|L}{I|L}E[VS][{I|L}V]{I|L}{[SA]|[TG]} 5.3375;4.5975;3.3164;3.1987;2.938;2.7901 -;-;-;-;-;- 278 + 1 1.178 153852.9 1.0 9757 5597 15343 HBL1_DMSO_200M_050219_1,15356 HBL1_DMSO_200M_050219_1,15356,LLESKDLLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15357 75.316 364.0 141630.0 25 0 9847.7 + -1 AGCCFCCCCCF 11 94 667.1766364730541 0 666.7347289919853 PEAK CID FTMS 0 0 0 -1 0 14 3 Carbamidomethyl (C) _AGC(Carbamidomethyl (C))C(Carbamidomethyl (C))FC(Carbamidomethyl (C))CCCCF_ REV__ENSG00000163793|ENST00000296097|DNAJC5G 0.3506318815782774 0.47618401536486 3 SV 2 -1 9.8206 0.0 0.0 0.7371 0.0 0.0 884.1414371533364 259.07306848697505 1143.2145056403117 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SV 0.7371 - 34 + 1 1.178 46097.2 1.0 9758 5597 15343 HBL1_DMSO_200M_050219_1,15357 HBL1_DMSO_200M_050219_1,15357,AGCCFCCCCCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15359 75.321 8.2 2251500.0 25 0 194350.0 + 19060 LDPYNAAIV 9 45 488.2613472483728 974.5081415635456 2 488.2613098025322 MULTI CID FTMS 0 0 0 15358 1845302.125 0.0710876206596652 1 -0.0853118896484375 1 Unmodified _LDPYNAAIV_ REV__ENSG00000174807|ENST00000311330|CD248;REV__nc|ENSG00000174807|Q9HCU0-2|CD248 3.944395688203298 0.7769873103969335 3 V 1 -1 14.604 0.0 0.0 1.4986 0.0 0.0 857.4287175906926 0.0 857.4287175906926 0.0 1.9280313679915635 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4986 + + 10 + 1 1.178 20885.5 1.0 9759 5598 15358 HBL1_DMSO_200M_050219_1,15359 HBL1_DMSO_200M_050219_1,15359,LDPYNAAIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15360 75.322 8.0 4407500.0 25 0 539280.0 25979 NLPVFWLLG 9 65 529.8038251856889 1057.5930974381777 2 529.8038818240166 MULTI CID FTMS 0 0 0 15358 2630377.0 0.1935271147440271 4 -0.2947006225585937 2 Unmodified _NLPVFWLLG_ nc|ENSG00000005483|Q8IZD2-5|KMT2E 13.50788311687929 0.4710407108020397 3 {[QV]|[N{I|L}]|[RA]|[KV]}PV 4 5 35.49 0.0 0.0 3.3557 0.0 0.0 0.0 631.3221529596311 631.3221529596311 24.06295947543775 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}PV 3.3557 + + 70 + 1 1.178 33654.3 1.0 9760 5598 15358 HBL1_DMSO_200M_050219_1,15360 HBL1_DMSO_200M_050219_1,15360,NLPVFWLLG False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15361 75.323 19.0 2438100.0 25 0 304790.0 + 15001 ILSDWNKIV 9 77 544.3097582509859 1086.6049635687716 2 544.3092529177666 MULTI CID FTMS 0 0 0 15358 2780512.0 0.7636442108953474 1 -0.0853118896484375 3 Unmodified _ILSDWNKIV_ REV__ENSG00000160299|ENST00000359568|PCNT;REV__nc|ENSG00000160299|O95613-2|PCNT 8.593279151180031 0.6146971463335029 3 {[TV]|[{I|L}S]}{I|L}G 4 -1 18.672 0.0 0.0 1.7184 0.0 0.0 0.0 713.3609199498841 713.3609199498841 8.58349385648225 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}G 1.7184 - 36 1 1.178 40025.8 1.0 9761 5598 15358 HBL1_DMSO_200M_050219_1,15361 HBL1_DMSO_200M_050219_1,15361,ILSDWNKIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15362 75.324 26.0 2862500.0 25 0 412330.0 + 18785 LAPLAKVI 8 81 412.7839829502703 823.5534129673406 2 412.7838622927666 MULTI CID FTMS 0 0 0 15358 2218527.75 0.2450209786579843 4 -0.2947006225585937 4 Unmodified _LAPLAKVI_ ENSG00000105679|ENST00000222286|GAPDHS;ENSG00000111640|ENST00000229239|GAPDH;ENST00000423411.2_1_6:135940529-135940997:-|nuORF;ENST00000455134.1_1_10:93426952-93427153:-|nuORF;ENST00000515281.1_1_11:88141588-88141981:-|nuORF;nc|ENSG00000111640|P04406-2|GAPDH 40.44857923139169 0.2267865117615937 3 [{I|L}A]P{I|L}AKV{I|L} 8 0 + 61.38 0.0 0.0 7.4531 7.4531 90.419 0.0 0.0 0.0 34.267222304475595 14.024174299985006 14.024174299985006 8.010299956639813 0 0.8807196863200843 2.0 0.0 0.0 + + [{I|L}A]P{I|L}AKV{I|L};[{I|L}A]{I|L}PAKV{I|L} 7.4531;6.4804 +;- + 183 + 1 1.178 66752.3 1.0 9762 5598 15358 HBL1_DMSO_200M_050219_1,15362 HBL1_DMSO_200M_050219_1,15362,LAPLAKVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15363 75.325 31.0 1665400.0 25 0 90587.0 + 27371 PIATSLPPNY 10 102 536.787520797261 1071.560488661322 2 537.2881347537041 MULTI CID FTMS 0 0 0 15358 1442818.625 0.0079428208891246 25 -1.968719482421875 5 Unmodified _PIATSLPPNY_ ENSG00000135905|ENST00000258390|DOCK10;nc|ENSG00000135905|Q96BY6-3|DOCK10 26.88365393820708 0.3646707531412818 3 SHPPNY 6 5 29.858 0.0 0.0 2.7864 0.0 0.0 358.2506874912031 0.0 358.2506874912031 0.0 -2.995587109089044 -2.995587109089044 0.0 0 0.0 0.0 0.0 0.7742275032520141 SHPPNY 2.7864 - 473 + 1 1.178 48080.8 1.0 9763 5598 15358 HBL1_DMSO_200M_050219_1,15363 HBL1_DMSO_200M_050219_1,15363,PIATSLPPNY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15364 75.326 28.0 1777300.0 25 0 148420.0 + + 9399 RVPSALVTL 9 64 478.3003648756762 954.5861768181524 2 478.3002502322197 MULTI CID FTMS 0 0 0 15358 1351086.125 0.6038319094542273 -3 0.1436386108398437 6 Unmodified _FIVIIHTI_ nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;nc|ENSG00000164944|Q69YN4-4|VIRMA;ENSG00000164944|ENST00000297591|VIRMA 24.67388899826682 0.525179942228231 3 {I|L}VT{I|L} 4 -1 40.745 0.0 0.0 4.2684 0.0 0.0 510.2922443422363 0.0 510.2922443422363 0.0 16.564184743271753 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {I|L}VT{I|L} 4.2684 - 41 1 1.178 43868.3 1.0 9764 5598 15358 HBL1_DMSO_200M_050219_1,15364 HBL1_DMSO_200M_050219_1,15364,FIVIIHTI False False RVPSALVTL 75.326394 478.30025023222 45729816.0 15358.0 nc|ENSG00000164944|Q69YN4-2|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA;;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;;nc|ENSG00000164944|Q69YN4-4|VIRMA;;ENSG00000164944|ENST00000297591|VIRMA 4.020558993021647 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15365 75.328 25.0 1730100.0 25 0 84993.0 + 21967 LPPNLYPTV 9 76 507.2871405317021 1012.559728130204 2 507.2876464724541 MULTI CID FTMS 0 0 0 15358 953698.125 0.7116962304073503 -5 0.385223388671875 7 Unmodified _LPPNLYPTV_ ENSG00000010017|ENST00000011619|RANBP9;nc|ENSG00000010017|Q96S59-3|RANBP9 34.10243960390752 0.1078313939113124 3 [{I|L}P]NPY{I|L}PS{I|L} 9 5 + 43.663 0.0 0.0 4.3121 4.3121 77.405 0.0 0.0 0.0 14.259687322722808 12.007046801327732 12.007046801327732 4.771212547196619 0 0.6549471895720985 1.3010299956639813 0.0 0.0 [{I|L}P]NPY{I|L}PS{I|L};[{I|L}P]NYP{I|L}PS{I|L};[{I|L}P]NP{I|L}YPS{I|L};[{I|L}P]GGPY{I|L}PS{I|L};[{I|L}P]GGYP{I|L}PS{I|L};[NP]{I|L}PY{I|L}PS{I|L};[{I|L}P]GGP{I|L}YPS{I|L};[NP]P{I|L}Y{I|L}PS{I|L};[{I|L}P]S{[WT]|[RM]}{I|L}PS{I|L};[NP]{I|L}YP{I|L}PS{I|L} 4.3121;3.8409;3.6218;3.4027;2.9315;2.9038;2.7124;2.7022;2.6794;2.4326 -;-;-;-;-;-;-;-;-;- 261 1 1.178 44246.6 1.0 9765 5598 15358 HBL1_DMSO_200M_050219_1,15365 HBL1_DMSO_200M_050219_1,15365,LPPNLYPTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15366 75.332 224.0 678830.0 25 0 92796.0 + + -1 SYPDWGSNYY 10 144 626.2512571689858 1250.4879614047716 2 626.2518188357353 MULTI CID FTMS 0 0 0 15358 673676.875 0.6579716268685935 1 -0.0853118896484375 8 Oxidation (M) _NDAM(Oxidation (M))RESSYY_ ENSG00000160688|ENST00000292180|FLAD1;nc|ENSG00000160688|Q8NFF5-5|FLAD1;ENST00000489992.5_1_1:154961096-154965253:+|nuORF;nc|ENSG00000160688|Q8NFF5-2|FLAD1;nc|ENSG00000160688|Q8NFF5-3|FLAD1;nc|ENSG00000160688|Q8NFF5-4|FLAD1 15.847184025352805 0.5816416552707754 3 [DP]WGSNY 7 -1 49.311 0.0 0.0 3.9434 0.0 0.0 0.0 428.145227672074 428.145227672074 23.40284340191072 0.0 0.0 0.0 0 0.0 0.6989700043360187 1.5888903526330402 0.6747425010840047 [DP]WGSNY 3.9434 - 2918 1 1.178 113401.6 1.0 9766 5598 15358 HBL1_DMSO_200M_050219_1,15366 HBL1_DMSO_200M_050219_1,15366,NDAMRESSYY False False SYPDWGSNYY 75.331813 626.251818835735 10701981.0 15358.0 ENSG00000160688|ENST00000292180|FLAD1;;nc|ENSG00000160688|Q8NFF5-5|FLAD1;;ENST00000489992.5_1_1:154961096-154965253:+|nuORF;;nc|ENSG00000160688|Q8NFF5-2|FLAD1;;nc|ENSG00000160688|Q8NFF5-3|FLAD1;;nc|ENSG00000160688|Q8NFF5-4|FLAD1 7.002249399820964 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15367 75.336 248.0 570570.0 25 0 81634.0 -1 QIKKVMIYR 9 167 597.8561389632442 1193.6977249932884 2 597.8569824099541 MULTI CID FTMS 0 0 0 15358 545973.5625 0.2066721084755566 6 -0.4855499267578125 9 Oxidation (M) _QIKKVM(Oxidation (M))IYR_ CHD5|p.N1140I|1|0.17|ENSG00000116254|chr1:6129038-6129038|T/A|missense_variant 1.844237919475145 0.850302753031785 3 V 1 -1 10.089 0.0 0.0 0.84516 0.0 0.0 1076.618217097095 0.0 1076.618217097095 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.84516 + + 426 + 1 1.178 110705.3 1.0 9767 5598 15358 HBL1_DMSO_200M_050219_1,15367 HBL1_DMSO_200M_050219_1,15367,QIKKVMIYR False False False False variant PXD020620_cell_line HBL1_DMSO_200M_050219_1 15368 75.342 332.0 805800.0 25 0 94315.0 + 32624 SAYEVIKL 8 185 461.7659059232856 921.5172589133712 2 461.7659789919853 MULTI CID FTMS 0 0 0 15358 488196.25 0.3571061851365112 2 -0.183349609375 10 Unmodified _SAYEVIKL_ ENSG00000111716|ENST00000350669|LDHB;ENSG00000134333|ENST00000422447|LDHA;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;ENST00000542765.4_1_12:21788478-21790169:-|nuORF;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA 68.08070601005525 0.1147890174299629 3 {[SA]|[TG]}YEV{I|L}K{I|L} 8 0 + 69.876 0.0 0.0 7.5827 7.5827 87.774 0.0 0.0 0.0 4.771212547196626 5.593080109070115 4.771212547196626 4.771212547196626 0 1.305462187404089 1.6989700043360187 0.4247425010840047 0.25 + + {[SA]|[TG]}YEV{I|L}K{I|L};[YT]GEV{I|L}K{I|L};{[SA]|[TG]}YEV{I|L}{I|L}K;[YT]GEV{I|L}{I|L}K 7.5827;7.065;6.9758;6.458 +;-;-;- + 302 + 1 1.178 204452.6 1.0 9768 5598 15358 HBL1_DMSO_200M_050219_1,15368 HBL1_DMSO_200M_050219_1,15368,SAYEVIKL True True SAYEVIKL 75.342455 461.765978991985 18655994.0 15358.0 ENSG00000111716|ENST00000350669|LDHB;;nc|ENSG00000134333|P00338-4|LDHA;;nc|ENSG00000134333|P00338-3|LDHA;;ENST00000542765.4_1_12:21788478-21790169:-|nuORF;;ENSG00000134333|ENST00000422447|LDHA;;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 4.740554332733154 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15369 75.344 60.0 1240700.0 25 0 126560.0 + 18250 KVIDYVPGI 9 112 502.2954404116305 1002.5763278900612 2 502.2961303591728 MULTI CID FTMS 0 0 0 15358 460194.28125 0.6151100051602316 1 -0.0853118896484375 11 Unmodified _KVIDYVPGI_ ENSG00000163659|ENST00000295924|TIPARP 37.97399986684836 0.0865783450051559 3 [{I|L}T]{I|L}GYAVPG{I|L} 10 4 + 37.873 0.0 0.0 3.7775 3.7775 68.914 0.0 0.0 0.0 3.8573761986571498 1.9629464514396844 1.9629464514396844 0.2287874528033739 0 0.5 0.0 0.0 0.0 [{I|L}T]{I|L}GYAVPG{I|L};[{I|L}T]AVYAVPG{I|L};[{I|L}T]{I|L}GYAVPAV;[{I|L}T]AVYAVPAV;[{I|L}T]AVK{I|L}[MD]{I|L};[{I|L}T]{I|L}AGYVPG{I|L};[{I|L}T]A{I|L}GYVPG{I|L};[{I|L}T]{I|L}QYVPG{I|L};[{I|L}T]{I|L}AGYVPAV;[{I|L}T]A{I|L}GYVPAV 3.7775;3.7547;3.5817;3.5589;3.3308;2.8481;2.8252;2.6724;2.6523;2.6294 -;-;-;-;-;-;-;-;-;- 359 + 1 1.178 62821.6 1.0 9769 5598 15358 HBL1_DMSO_200M_050219_1,15369 HBL1_DMSO_200M_050219_1,15369,KVIDYVPGI True True KVIDYVPGI 75.343934 502.296130359173 7648691.5 15358.0 ENSG00000163659|ENST00000295924|TIPARP 3.302974065144857 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15370 75.345 37.0 1262100.0 25 0 108360.0 + 27171 PFYSILHS 8 84 482.248767888967 0 482.2489807009697 PEAK CID FTMS 0 0 0 15358 380852.28125 0.6223280501740304 1 -0.0853118896484375 12 Unmodified _PFYSILHS_ REV__ENSG00000156049|ENST00000341700|GNA14 13.50788311687929 0.5021269579892848 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.72622 0.0 0.0 500.2893307453559 312.1013582818969 812.3906890272528 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.72622 + + 15 + 1 1.178 43334.2 1.0 9770 5598 15358 HBL1_DMSO_200M_050219_1,15370 HBL1_DMSO_200M_050219_1,15370,PFYSILHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15371 75.351 305.0 572340.0 25 0 106870.0 + 32240 RWPDYVREL 9 145 617.3225132351072 1232.6304735370145 2 617.3220092654228 MULTI CID FTMS 0 0 0 15358 250948.734375 0.0477369007961516 -18 1.4676666259765625 13 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 42.312485326615175 0.0627620958981271 3 {I|L}{M(Oxidation (M))|F}RVYDPW 8 8 65.399 0.0 0.0 5.3056 0.0 0.0 0.0 153.07851587467033 153.07851587467033 42.16714771476625 0.0 0.0 0.0 0 1.548455006504028 1.3010299956639813 0.0 0.805462187404089 {I|L}{M(Oxidation (M))|F}RVYDPW 5.3056 - 3471 + 1 1.178 128246.9 1.0 9771 5598 15358 HBL1_DMSO_200M_050219_1,15371 HBL1_DMSO_200M_050219_1,15371,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15372 75.357 334.0 138420.0 25 0 7021.3 -1 0 76 771.7284493596313 0 771.7272216677666 PEAK CID FTMS 0 0 0 15358 164746.921875 1.0 0 0.0 14 3 SVSEAA{I|L}EA 9 -1 41.068 0.0 0.0 2.6643 0.0 0.0 321.83939276047505 359.1683748834594 681.0077676439345 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SVSEAA{I|L}EA 2.6643 - 341 + 1 1.178 41227.5 1.0 9772 5598 15358 HBL1_DMSO_200M_050219_1,15372 HBL1_DMSO_200M_050219_1,15372, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15373 75.363 332.0 185880.0 25 0 10793.0 -1 LMVKLKVHLN 10 116 605.8709722742459 0 605.8716918826103 PEAK CID FTMS 0 0 0 15358 167292.359375 1.0 0 0.0 15 Oxidation (M) _LM(Oxidation (M))VKLKVHLN_ ENST00000506664.5_1_5:87836708-87836918:-|nuORF 3.944395688203298 0.3961065659209837 3 YEY{I|L}N 5 -1 11.771 0.0 0.0 0.97304 0.0 0.0 259.27844853922767 265.1307161920532 524.4091647312808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YEY{I|L}N 0.97304 - 103 + 1 1.178 49633.9 1.0 9773 5598 15358 HBL1_DMSO_200M_050219_1,15373 HBL1_DMSO_200M_050219_1,15373,LMVKLKVHLN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15374 75.369 327.0 165410.0 25 0 24756.0 -1 FCCCCCFCCGA 11 91 667.1766364730541 0 666.9348022341728 PEAK CID FTMS 0 0 0 -1 0 16 3 Carbamidomethyl (C) _FC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CCFCCGA_ ENSG00000163793|ENST00000296097|DNAJC5G 0.0 0.4761840153648598 3 SV 2 -1 6.2422 0.0 0.0 0.46852 0.0 0.0 884.1422611279457 259.0731295221313 1143.215390650077 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 SV 0.46852 - 34 + 1 1.178 48481.2 1.0 9774 5598 15358 HBL1_DMSO_200M_050219_1,15374 HBL1_DMSO_200M_050219_1,15374,FCCCCCFCCGA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15375 75.375 337.0 195160.0 25 0 16641.0 + 8971 FAPTIQEI 8 87 918.4942020462375 917.4869255796376 1 918.4942504763604 MULTI CID FTMS 0 0 0 15358 134793.3125 0.4888225146030165 2 -0.183349609375 17 Unmodified _FAPTIQEI_ ENSG00000172260|ENST00000357731|NEGR1;nc|ENSG00000172260|Q7Z3B1-2|NEGR1 52.268347100219714 0.1285778651304833 3 [{I|L}P]TQEA{M(Oxidation (M))|F}{I|L} 8 5 + 57.52 0.0 0.0 6.2693 6.2693 59.888 0.0 0.0 0.0 6.041614267982979 13.552207222934385 6.041614267982979 0.0 0 0.3252574989159953 1.2218487496163564 0.7134679910804405 0.0 [{I|L}P]TQEA{M(Oxidation (M))|F}{I|L};[{I|L}P]TQE{M(Oxidation (M))|F}A{I|L};[{I|L}P]TAGEA{M(Oxidation (M))|F}{I|L};[{I|L}P]TAGE{M(Oxidation (M))|F}A{I|L};[{I|L}P]TA{M(Oxidation (M))|F}QE{I|L};[TP]{I|L}QEA{M(Oxidation (M))|F}{I|L};[TP]{I|L}QE{M(Oxidation (M))|F}A{I|L};[{I|L}P]TA{M(Oxidation (M))|F}WA{I|L};[TP]{I|L}AGEA{M(Oxidation (M))|F}{I|L};[TP]{I|L}AGE{M(Oxidation (M))|F}A{I|L} 6.2693;6.2693;6.0542;6.0542;6.0529;5.6108;5.6108;5.4734;5.3957;5.3957 -;-;-;-;-;-;-;-;-;- 1303 1 1.178 45956.9 1.0 9775 5598 15358 HBL1_DMSO_200M_050219_1,15375 HBL1_DMSO_200M_050219_1,15375,FAPTIQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15376 75.383 359.0 550450.0 25 0 31916.0 + + -1 IPYTFEDRI 9 172 575.796190083634 1149.577827234068 2 577.3023559451103 MULTI CID FTMS 0 0 0 -1 0 18 2 Oxidation (M) _LM(Oxidation (M))VTIGISM(Oxidation (M))PG_ ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57626939-57627538:+|nuORF;ENSG00000182199|ENST00000328923|SHMT2;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;nc|ENSG00000182199|P34897-3|SHMT2;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 8.745405648335112 0.8338865417133445 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[TV]|[{I|L}S]}A{M(Oxidation (M))|F}TYP 9 -1 22.507 0.0 0.0 1.9578 0.0 0.0 0.0 107.05750345514356 107.05750345514356 -2.185887399941663 0.0 -2.185887399941663 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[TV]|[{I|L}S]}A{M(Oxidation (M))|F}TYP 1.9578 - 903 1 1.178 153003.6 1.0 9776 5598 15358 HBL1_DMSO_200M_050219_1,15376 HBL1_DMSO_200M_050219_1,15376,LMVTIGISMPG False False IPYTFEDRI 75.382528 577.30235594511 1440601.0 15358.0 ENST00000553837.5_1_12:57625333-57628141:+|nuORF;;ENST00000554467.5_1_12:57626939-57627538:+|nuORF;;ENSG00000182199|ENST00000328923|SHMT2;;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;;nc|ENSG00000182199|P34897-2|SHMT2;;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;;nc|ENSG00000182199|P34897-3|SHMT2;;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 2.2272894382476807 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15377 75.392 550.0 158730.0 25 0 36133.0 + 30107 QVILHRNCMNI 11 117 670.8483154177666 0 670.8483154177666 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _QVILHRNCMNI_ REV__ENST00000229758.7_1_6:153296459-153296531:-|nuORF 13.042465956692816 0.4221659143281722 3 {I|L} 1 -1 7.4913 0.0 0.0 0.55919 0.0 0.0 670.3189930408081 553.2558687799436 1223.5748618207515 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 {I|L} 0.55919 + + 29 + 1 1.178 68263.4 1.0 9777 5598 15358 HBL1_DMSO_200M_050219_1,15377 HBL1_DMSO_200M_050219_1,15377,QVILHRNCMNI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15378 75.402 529.0 103670.0 25 0 10154.0 + 5503 DLTRETVLRYY 11 112 714.8792088954549 1427.7438648577097 2 715.3799316287041 MULTI CID FTMS 0 0 0 15358 119579.5625 1.0 0 0.0 20 Unmodified _DLTRETVLRYY_ REV__ENSG00000204956|ENST00000517417|PCDHGA1;REV__nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1 4.897010918128616 0.8520435188433833 3 Y 1 -1 15.485 0.0 0.0 1.0845 0.0 0.0 1246.669766202239 0.0 1246.669766202239 0.0 5.105946495349691 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0845 + + 123 + 1 1.178 47249.6 1.0 9778 5598 15358 HBL1_DMSO_200M_050219_1,15378 HBL1_DMSO_200M_050219_1,15378,DLTRETVLRYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15380 75.406 41.0 1064000.0 25 0 100850.0 + 6123 DSYINVQEI 9 83 540.764015728368 1079.513478523536 2 540.7645141482353 MULTI CID FTMS 0 0 0 15379 760894.625 0.2593543466147568 2 -0.1354217529296875 1 Unmodified _DSYINVQEI_ ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX 19.256988751693697 0.3154191944385105 3 {I|L} 1 8 14.604 0.0 0.0 1.3528 0.0 0.0 948.4185058446282 0.0 948.4185058446282 0.0 -3.5295435376151865 -3.5295435376151865 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3528 + + 60 + 1 1.178 41770.0 1.0 9779 5599 15379 HBL1_DMSO_200M_050219_1,15380 HBL1_DMSO_200M_050219_1,15380,DSYINVQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15381 75.42 800.0 400750.0 25 0 32425.0 39802 VESFSSSTR 9 246 333.8291173151305 998.4655225455916 3 333.8286620974541 MULTI CID FTMS 0 0 0 15379 169038.109375 0.1183234818284906 2 -0.1354217529296875 2 Unmodified _VESFSSSTR_ ENSG00000146166|ENST00000370657|LGSN 13.90604991867851 0.4602628045680013 3 {NN|[MP]|[D{I|L}]|[EV]}YVAYQQ 8 7 + 36.405 0.0 0.0 3.6461 3.6461 69.667 0.0 0.0 0.0 15.14156774188341 6.989700043360188 6.989700043360188 0.8412188239621088 0 0.5501648626366046 0.585026652029182 0.0451140161145328 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}YVAYQQ;{NN|[MP]|[D{I|L}]|[EV]}YAVYQQ;{NN|[MP]|[D{I|L}]|[EV]}YVYAQQ;{NN|[MP]|[D{I|L}]|[EV]}S{M(Oxidation (M))|F}VYQQ;{NN|[MP]|[D{I|L}]|[EV]}YVYE[TP];HHYAR[C(Carbamidomethyl (C))R];{NN|[MP]|[D{I|L}]|[EV]}YA[YN]AAV;HHAYR[C(Carbamidomethyl (C))R];{NN|[MP]|[D{I|L}]|[EV]}YA[HN]PAV;{NN|[MP]|[D{I|L}]|[EV]}Y[TP]YEV 3.6461;3.5618;3.3614;3.1633;2.1566;2.1296;1.9713;1.8449;1.7209;1.6795 -;-;-;-;-;-;-;-;-;- 1028 1 1.178 254944.4 0.9800000190734864 9780 5599 15379 HBL1_DMSO_200M_050219_1,15381 HBL1_DMSO_200M_050219_1,15381,VESFSSSTR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15382 75.421 20.0 3740600.0 25 0 367320.0 + 25339 NALDYIRTV 9 95 532.7901246477538 1063.5656963623076 2 532.7905151247978 MULTI CID FTMS 0 0 0 15379 1940866.25 0.3320373546381082 -2 0.1481552124023437 3 Unmodified _NALDYIRTV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 53.40400417844725 0.0329064971918313 3 {[QG]|[NA]}{I|L}DY{I|L}RTV 9 0 + 81.569 0.0 0.0 7.6694 7.6694 83.826 0.0 0.0 0.0 27.147642715192504 1.9382002601611248 1.9382002601611248 1.9382002601611248 0 1.3494850021680094 2.0 0.6694451763165201 0.4247425010840047 + + {[QG]|[NA]}{I|L}DY{I|L}RTV;{[QG]|[NA]}{I|L}DY{I|L}RS{I|L};{[QG]|[NA]}{I|L}V[YE]RTV;{[QG]|[NA]}{I|L}V[YE]RS{I|L};{[QG]|[NA]}{I|L}DK[KG][YG]V;{NN|[MP]|[D{I|L}]|[EV]}[YR]{I|L}T{[{M(Oxidation (M))|F}H]|[RQ]} 7.6694;7.4872;5.507;5.3248;4.2672;1.0545 +;-;-;-;-;- + 336 + 1 1.178 62454.9 1.0 9781 5599 15379 HBL1_DMSO_200M_050219_1,15382 HBL1_DMSO_200M_050219_1,15382,NALDYIRTV True True NALDYIRTV 75.420804 532.790515124798 35566620.0 15379.0 ENST00000466404.5_1_19:54621832-54631576:+|nuORF;;nc|ENSG00000105618|Q8WWY3-3|PRPF31;;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;;nc|ENSG00000105618|Q8WWY3-2|PRPF31;;ENSG00000105618|ENST00000321030|PRPF31;;nc|ENSG00000105618|Q8WWY3-4|PRPF31 7.010481198628743 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15383 75.422 56.0 1453100.0 25 0 252940.0 + 26206 NQIEDNDDFQL 11 98 675.7940088956558 1349.5734648581115 2 675.7943603396416 MULTI CID FTMS 0 0 0 15379 950770.3125 0.0484135764960939 -4 0.2289505004882812 4 Unmodified _NQIEDNDDFQL_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 74.19965305603844 0.0202339408097979 3 [AG]N{I|L}EDNDD 9 6 64.369 0.0 0.0 4.7696 0.0 0.0 0.0 403.19891897185 403.19891897185 22.31144280508005 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3252574989159953 2.1095756168365014 [AG]N{I|L}EDNDD 4.7696 - 633 1 1.178 66355.0 1.0 9782 5599 15379 HBL1_DMSO_200M_050219_1,15383 HBL1_DMSO_200M_050219_1,15383,NQIEDNDDFQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15384 75.423 35.0 1806700.0 25 0 325100.0 + 18561 LAAEFLKQV 9 90 509.7994184317033 1017.5842839302068 2 509.8003723025322 MULTI CID FTMS 0 0 0 15379 853139.5625 0.4244888572799529 -2 0.1481552124023437 5 Unmodified _LAAEFLKQV_ ENSG00000135624|ENST00000258091|CCT7;ENST00000406551.2_1_6:150201187-150201547:+|nuORF;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 78.14939416004806 0.0179651292570206 3 [{I|L}A]AE{M(Oxidation (M))|F}{I|L}KQV 9 0 + 73.483 0.0 0.0 7.2213 7.2213 81.783 0.0 0.0 0.0 25.6424927368726 1.4612803567823818 1.4612803567823818 1.4612803567823818 0 1.110924374808178 2.0 0.0 1.4291746928241125 + + [{I|L}A]AE{M(Oxidation (M))|F}{I|L}KQV;[{I|L}A]AE{M(Oxidation (M))|F}{I|L}KN{I|L};[{I|L}A]AE{M(Oxidation (M))|F}{I|L}KVQ;[{I|L}A]AE{M(Oxidation (M))|F}{I|L}K[AG]V;[{I|L}A]AE{M(Oxidation (M))|F}{I|L}KGG{I|L};[{I|L}A]AE{M(Oxidation (M))|F}[KQ]{I|L}V;[{I|L}A]AE{M(Oxidation (M))|F}[KQ]V{I|L};[{I|L}A]VV{[{M(Oxidation (M))|F}D]|MM}KQV;[{I|L}A]VV{[{M(Oxidation (M))|F}D]|MM}KN{I|L};[{I|L}A]VV{[{M(Oxidation (M))|F}D]|MM}KVQ 7.2213;7.0777;6.7525;5.973;5.8294;5.158;5.0144;3.9391;3.7955;3.4703 +;-;-;-;-;-;-;-;-;- + 749 + 1 1.178 53072.9 1.0 9783 5599 15379 HBL1_DMSO_200M_050219_1,15384 HBL1_DMSO_200M_050219_1,15384,LAAEFLKQV True True LAAEFLKQV 75.423415 509.800372302532 37046380.0 15379.0 ENST00000461290.5_1_2:73461506-73471178:+|nuORF;;nc|ENSG00000135624|Q99832-3|CCT7;;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;;ENSG00000135624|ENST00000258091|CCT7;;nc|ENSG00000135624|Q99832-4|CCT7;;ENST00000406551.2_1_6:150201187-150201547:+|nuORF 6.386097431182861 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15385 75.425 86.0 695770.0 25 0 139410.0 7665 EKKKTYIMKP 10 79 633.3694136787589 1264.7242744243176 2 633.3696166872978 MULTI CID FTMS 0 0 0 15379 649227.3125 0.4245060959701733 -4 0.2289505004882812 6 Unmodified _EKKKTYIMKP_ ENST00000272793.9_1_2:170938445-170938493:+|nuORF 3.2813086475875832 0.7114585191678878 3 S 1 10 6.9897 0.0 0.0 0.55267 0.0 0.0 81.53343077373013 1093.1168917291627 1174.6503225028928 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.55267 - 5 + 1 1.178 51200.9 1.0 9784 5599 15379 HBL1_DMSO_200M_050219_1,15385 HBL1_DMSO_200M_050219_1,15385,EKKKTYIMKP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15386 75.428 130.0 521270.0 25 0 45987.0 + -1 AVTYCESLA 9 96 338.49206106273925 1012.4543537884178 3 338.4918701052666 MULTI CID FTMS 0 0 0 15379 459660.125 0.511008991236664 3 -0.2093887329101562 7 Carbamidomethyl (C) _AVTYC(Carbamidomethyl (C))ESLA_ REV__ENSG00000121060|ENST00000316881|TRIM25;REV__ENST00000572021.5_1_17:54969063-54989474:-|nuORF 8.155526934196011 0.6299788542272896 3 AVEA 4 -1 36.186 0.0 0.0 3.5741 0.0 0.0 0.0 639.2469576471311 639.2469576471311 25.34816983453236 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 AVEA 3.5741 - 56 + 1 1.178 58140.1 1.0 9785 5599 15379 HBL1_DMSO_200M_050219_1,15386 HBL1_DMSO_200M_050219_1,15386,AVTYCESLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15387 75.431 127.0 1315300.0 25 0 126680.0 + 18255 KVIEAIRVEL 10 126 585.3664848038255 1168.718416674451 2 585.3669311404228 MULTI CID FTMS 0 0 0 15379 436753.3125 0.1271855065533892 -3 0.2002410888671875 8 Unmodified _KVIEAIRVEL_ ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1 22.10888232116614 0.4719523613745568 3 KV{I|L}EA{I|L} 6 4 56.389 0.0 0.0 4.8248 0.0 0.0 0.0 512.2839107414512 512.2839107414512 23.680540824916392 0.0 0.0 0.0 0 1.0994850021680094 0.0 0.4247425010840047 0.0 + KV{I|L}EA{I|L} 4.8248 + + 918 + 1 1.178 126344.7 1.0 9786 5599 15379 HBL1_DMSO_200M_050219_1,15387 HBL1_DMSO_200M_050219_1,15387,KVIEAIRVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15388 75.44 505.0 267610.0 25 0 15276.0 -1 0 125 927.4238445410928 1852.8331361489847 2 927.9275390505792 MULTI CID FTMS 0 0 0 15379 230568.1875 0.6583843283052679 -2 0.1481552124023437 9 3 [QP]S{I|L}H 5 -1 37.351 0.0 0.0 2.0159 0.0 0.0 0.0 1287.5357478035355 1287.5357478035355 15.792264756339804 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.805462187404089 0.0 [QP]S{I|L}H 2.0159 - 1668 1 1.178 90290.2 1.0 9787 5599 15379 HBL1_DMSO_200M_050219_1,15388 HBL1_DMSO_200M_050219_1,15388, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15389 75.449 517.0 238580.0 25 0 38527.0 13220 HGSHGGGL 8 130 721.3404851528336 720.3332086862335 1 721.3416625857353 MULTI CID FTMS 0 0 0 15379 217953.125 0.0678083343010284 7 -0.4987106323242187 10 Unmodified _HGSHGGGL_ ENSG00000172869|ENST00000539542|DMXL1;nc|ENSG00000172869|Q9Y485|DMXL1 2.577480529830294 0.808687252328423 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PT{I|L} 6 7 + 57.59 0.0 0.0 7.9949 7.9949 81.328 0.0 0.0 0.0 10.751901125783364 13.18758762624411 10.751901125783364 0.1844655354022961 0 1.5731074559755158 0.958607314841775 1.066901560044258 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}T{I|L};[TP]{M(Oxidation (M))|F}DE{I|L};[{I|L}T]MDE{I|L};{[QN]|[E{I|L}]|[KN]}[MD]T{I|L};{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}[MT]E{I|L};{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}PVP;{[ES]|[DT]|[{I|L}C]}[NG]TT{I|L};{[ES]|[DT]|[{I|L}C]}M{I|L}E{I|L} 7.9949;7.9693;6.5023;4.8239;4.7784;3.9365;2.1318;2.0288;1.7281;1.7185 -;-;-;-;-;-;-;-;-;- 239 1 1.178 91471.9 1.0 9788 5599 15379 HBL1_DMSO_200M_050219_1,15389 HBL1_DMSO_200M_050219_1,15389,HGSHGGGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15390 75.458 525.0 452980.0 25 0 78504.0 -1 0 127 764.4011194886511 763.3938430220511 1 764.3972656130791 MULTI CID FTMS 0 0 0 15379 233195.203125 0.6236891843732156 -2 0.1481552124023437 11 3 M{I|L}PYQ{I|L} 6 -1 + 59.849 0.0 0.0 7.8398 7.8398 84.021 0.0 0.0 0.0 -2.340263187585009 10.177287669604311 -2.340263187585009 1.8370900142544289 0 1.0994850021680094 1.154901959985743 0.0 0.7742275032520141 M{I|L}PYQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QM{I|L}{I|L};M{I|L}{I|L}{M(Oxidation (M))|F}Q{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}M{I|L};[Q{I|L}]{M(Oxidation (M))|F}M{I|L}{I|L};M{I|L}PY[AG]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]M{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]{I|L}M{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PYQ{I|L};[Q{I|L}]{M(Oxidation (M))|F}{I|L}M{I|L} 7.8398;7.5992;7.0914;7.0763;5.6828;5.5917;5.4496;5.286;5.2491;5.1599 -;-;-;-;-;-;-;-;-;- 679 + 1 1.178 164705.5 1.0 9789 5599 15379 HBL1_DMSO_200M_050219_1,15390 HBL1_DMSO_200M_050219_1,15390, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15391 75.47 667.0 277470.0 25 0 55527.0 -1 0 65 1140.4767312102758 3418.408364231028 3 1140.810107409954 MULTI CID FTMS 0 0 0 15379 143993.4375 0.2321967804207267 -2 0.1481552124023437 12 3 VVT{I|L} 4 -1 13.15 0.0 0.0 0.38467 0.0 0.0 2165.761832103878 837.3571261041624 3003.118958208041 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 VVT{I|L} 0.38467 - 53 + 1 1.178 145924.4 1.0 9790 5599 15379 HBL1_DMSO_200M_050219_1,15391 HBL1_DMSO_200M_050219_1,15391, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15392 75.483 704.0 108960.0 25 0 22201.0 -1 0 53 1163.126427477746 3486.357453033438 3 1163.794604480267 MULTI CID FTMS 0 0 0 15379 143816.0625 0.7908427421870127 -9 0.6866836547851562 13 3 VM 2 -1 9.464 0.0 0.0 0.27146 0.0 0.0 2323.7426767560755 929.4918917291624 3253.234568485238 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VM 0.27146 - 11 + 1 1.178 70736.7 1.0 9791 5599 15379 HBL1_DMSO_200M_050219_1,15392 HBL1_DMSO_200M_050219_1,15392, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15393 75.486 131.0 253050.0 25 0 13121.0 + -1 LVESEEQLRLC 11 84 688.346817843924 0 688.3558837771416 PEAK CID FTMS 0 0 0 -1 0 14 Carbamidomethyl (C) _LVESEEQLRLC(Carbamidomethyl (C))_ REV__ENSG00000151576|ENST00000281273|QTRT2;REV__ENST00000467703.1_1_3:113789475-113795805:+|nuORF;REV__nc|ENSG00000151576|Q9H974-2|QTRT2;REV__nc|ENSG00000151576|Q9H974-3|QTRT2;REV__nc|ENSG00000151576|Q9H974-4|QTRT2 5.731851221503515 0.47618401536486 3 ETV 3 -1 20.362 0.0 0.0 1.4812 0.0 0.0 817.4080999439042 225.0877932184204 1042.4958931623246 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.0 ETV 1.4812 - 24 + 1 1.178 31076.9 1.0 9792 5599 15379 HBL1_DMSO_200M_050219_1,15393 HBL1_DMSO_200M_050219_1,15393,LVESEEQLRLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15394 75.5 800.0 263700.0 25 0 37975.0 + 41641 VPPQANLL 8 233 426.2514131378353 0 426.2524902224541 PEAK CID FTMS 0 0 0 15379 103511.4140625 0.4549903205027253 2 -0.1354217529296875 15 Unmodified _VPPQANLL_ REV__ENSG00000136861|ENST00000349780|CDK5RAP2;REV__ENST00000483412.5_1_9:123170580-123298708:-|nuORF;REV__nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;REV__nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 20.871210003555333 0.4015059659087983 3 D 1 -1 4.4629 0.0 0.0 0.52474 0.0 0.0 650.3719383588754 82.06696497134999 732.4389033302253 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0968040358200661 0.0 D 0.52474 - 163 + 1 1.178 159797.4 0.75 9793 5599 15379 HBL1_DMSO_200M_050219_1,15394 HBL1_DMSO_200M_050219_1,15394,VPPQANLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15396 75.504 4.9 9579800.0 25 0 1109000.0 + 8139 EPLISASNL 9 69 472.258785161171 942.503017389142 2 472.2592040896416 MULTI CID FTMS 0 0 0 15395 7109530.5 0.2035013269964197 3 -0.1844863891601562 1 Unmodified _EPLISASNL_ REV__ENSG00000131711|ENST00000296755|MAP1B 10.823927491677226 0.5436922275383211 3 [EP]{I|L} 3 -1 23.301 0.0 0.0 2.4722 0.0 0.0 0.0 600.3005692292388 600.3005692292388 9.805906063131715 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [EP]{I|L} 2.4722 + + 56 1 1.185 40205.8 1.0 9794 5600 15395 HBL1_DMSO_200M_050219_1,15396 HBL1_DMSO_200M_050219_1,15396,EPLISASNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15397 75.505 7.4 7579600.0 25 0 765580.0 + 21348 LPFGKVTNL 9 86 494.7951291879014 987.5757054426028 2 494.7952453494072 MULTI CID FTMS 0 0 0 15395 6721207.0 0.4624968957374458 3 -0.1844863891601562 2 Unmodified _LPFGKVTNL_ ENSG00000011304|ENST00000356948|PTBP1;ENSG00000119314|ENST00000374257|PTBP3;ENST00000586944.5_1_19:797434-805231:+|nuORF;ENST00000590887.5_1_19:797434-804304:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758|PTBP3 30.63653989081413 0.1413794767160703 3 {I|L}P{M(Oxidation (M))|F} 3 6 50.005 0.0 0.0 5.0634 0.0 0.0 0.0 627.3457295039952 627.3457295039952 30.568109453757653 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P{M(Oxidation (M))|F} 5.0634 + + 253 + 1 1.185 49425.7 1.0 9795 5600 15395 HBL1_DMSO_200M_050219_1,15397 HBL1_DMSO_200M_050219_1,15397,LPFGKVTNL False True LPFGKVTNL 75.505031 494.795245349407 109028040.0 15395.0 ENSG00000011304|ENST00000356948|PTBP1;;nc|ENSG00000011304|P26599-1|PTBP1;;ENSG00000119314|ENST00000374257|PTBP3;;nc|ENSG00000119314|O95758-4|PTBP3;;nc|ENSG00000119314|O95758-1|PTBP3;;nc|ENSG00000119314|O95758-5|PTBP3;;ENST00000586944.5_1_19:797434-805231:+|nuORF;;nc|ENSG00000011304|P26599-2|PTBP1;;nc|ENSG00000119314|O95758|PTBP3;;nc|ENSG00000119314|O95758-2|PTBP3;;ENST00000590887.5_1_19:797434-804304:+|nuORF 2.524869918823242 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15398 75.506 4.8 12000000.0 25 0 1521900.0 + 17010 KKCILPEL 8 79 472.287993149045 942.56143336489 2 472.2879821658134 MULTI CID FTMS 0 0 0 15395 7199535.5 0.4759025412984464 3 -0.1844863891601562 3 Unmodified _KKCILPEL_ REV__ENSG00000140153|ENST00000342702|WDR20;REV__ENST00000299135.6_1_14:102606435-102676214:+|nuORF;REV__nc|ENSG00000140153|Q8TBZ3-2|WDR20;REV__nc|ENSG00000140153|Q8TBZ3-4|WDR20;REV__nc|ENSG00000140153|Q8TBZ3-5|WDR20;REV__nc|ENSG00000140153|Q8TBZ3-6|WDR20;REV__nc|ENSG00000140153|Q8TBZ3-7|WDR20 14.581692164780916 0.6954967302934248 3 NPE{I|L} 4 -1 25.521 0.0 0.0 2.7076 0.0 0.0 471.3333449847337 0.0 471.3333449847337 0.0 -0.1651205376303011 -0.1651205376303011 0.0 0 0.0 0.0 0.805462187404089 0.0 NPE{I|L} 2.7076 - 88 + 1 1.185 49012.7 1.0 9796 5600 15395 HBL1_DMSO_200M_050219_1,15398 HBL1_DMSO_200M_050219_1,15398,KKCILPEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15399 75.507 9.3 5351800.0 25 0 852510.0 + 24274 MAPRTLLL 8 70 457.7781512369343 913.5417495406684 2 457.7787048220634 MULTI CID FTMS 0 0 0 15395 6523773.5 0.6871825265031086 -1 0.0980377197265625 4 Unmodified _MAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206341|P01893|HLA-H;nc|ENSG00000206503|P04439-2|HLA-A 25.399314129420983 0.5099049743284904 3 MA 2 6 38.227 0.0 0.0 4.1845 0.0 0.0 0.0 708.4417296442764 708.4417296442764 8.56824051822791 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + MA 4.1845 + + 44 + 1 1.185 43223.0 1.0 9797 5600 15395 HBL1_DMSO_200M_050219_1,15399 HBL1_DMSO_200M_050219_1,15399,MAPRTLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15400 75.509 15.0 2560500.0 25 0 349190.0 + 3731 DAFRVNVI 8 50 467.261603560774 932.508654188348 2 467.2615844607353 MULTI CID FTMS 0 0 0 15395 4029111.0 0.1347272014851484 3 -0.1844863891601562 5 Unmodified _DAFRVNVI_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 36.12702656103203 0.299085846329477 3 VNV{I|L} 4 4 35.037 0.0 0.0 3.7573 0.0 0.0 489.2363453595719 0.0 489.2363453595719 0.0 28.047444008242906 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + VNV{I|L} 3.7573 + + 26 1 1.185 39042.5 1.0 9798 5600 15395 HBL1_DMSO_200M_050219_1,15400 HBL1_DMSO_200M_050219_1,15400,DAFRVNVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15401 75.51 31.0 1950400.0 25 0 421550.0 39871 VFKLIPML 8 74 480.8013543239512 959.5881557147025 2 480.8012267947197 MULTI CID FTMS 0 0 0 15395 2915071.5 0.2175368049813587 3 -0.1844863891601562 6 Unmodified _VFKLIPML_ ENSG00000084693|ENST00000360131|AGBL5;ENST00000477136.5_1_2:27275826-27278122:+|nuORF;ENST00000489683.5_1_2:27275826-27279072:+|nuORF;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5 2.889219685676258 0.8067950007271085 3 V 1 7 11.109 0.0 0.0 1.1577 0.0 0.0 842.5086554479041 0.0 842.5086554479041 0.0 1.1944104445756842 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1577 + + 12 + 1 1.185 51621.5 1.0 9799 5600 15395 HBL1_DMSO_200M_050219_1,15401 HBL1_DMSO_200M_050219_1,15401,VFKLIPML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15402 75.511 20.0 741950.0 25 0 65597.0 -1 0 34 560.32203148338 559.3147550167799 1 560.3223754763603 MULTI CID FTMS 0 0 0 15395 2709414.75 0.8446304851369427 3 -0.1844863891601562 7 3 {I|L} 1 -1 0.9691 0.0 0.0 0.17327 0.0 0.0 311.1616005751768 132.04575525455314 443.20735582973 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.17327 - 2 + 1 1.185 18005.0 1.0 9800 5600 15395 HBL1_DMSO_200M_050219_1,15402 HBL1_DMSO_200M_050219_1,15402, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15403 75.512 15.0 2268800.0 25 0 154890.0 + 45835 YYPPSQIAQL 10 63 590.3063448428628 1178.5981367525255 2 590.3064453005791 MULTI CID FTMS 0 0 0 15395 2527002.5 0.6632991210967235 -3 0.2461929321289062 8 Unmodified _YYPPSQIAQL_ ENSG00000070756|ENST00000318607|PABPC1;nc|ENSG00000070756|P11940-2|PABPC1 21.53697664764585 0.484802182336468 3 YY{[WT]|[RM]}A 5 7 24.449 0.0 0.0 2.0744 0.0 0.0 0.0 491.2620638483032 491.2620638483032 0.2802872360024366 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YY{[WT]|[RM]}A 2.0744 - 49 + 1 1.185 32124.8 1.0 9801 5600 15395 HBL1_DMSO_200M_050219_1,15403 HBL1_DMSO_200M_050219_1,15403,YYPPSQIAQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15404 75.513 34.0 695690.0 25 0 60410.0 45659 YVRRRLTAE 9 60 582.3353301673142 1162.6561074014282 2 582.3353759646416 MULTI CID FTMS 0 0 0 15395 1695780.125 0.3233028071889294 10 -0.6640777587890625 9 Unmodified _YVRRRLTAE_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 0.6014990680409731 0.8936861360942873 3 V 1 8 9.5329 0.0 0.0 0.81992 0.0 0.0 1045.5764469173446 0.0 1045.5764469173446 0.0 7.543191530828635 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.81992 + + 3 + 1 1.185 26734.3 1.0 9802 5600 15395 HBL1_DMSO_200M_050219_1,15404 HBL1_DMSO_200M_050219_1,15404,YVRRRLTAE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15405 75.514 30.0 1783800.0 25 0 369470.0 + 18258 KVIEAIRVEL 10 73 390.5799443460143 1168.7180036382429 3 390.5798828005791 MULTI CID FTMS 0 0 0 15395 1588509.0 0.6575592025013187 -2 0.183349609375 10 Unmodified _KVIEAIRVEL_ ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1 35.079672537005266 0.2095246155385646 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NN{I|L}EVK{I|L} 10 4 + 38.607 0.0 0.0 3.3034 3.3034 72.464 0.0 0.0 0.0 6.0071123335628585 22.12389106339742 6.0071123335628585 3.0102999566398125 0 0.1989700043360188 0.0 0.0 0.3252574989159953 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NN{I|L}EVK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NQVEVK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NNE{I|L}VK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NQD{I|L}VK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NGG{I|L}EVK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GGN{I|L}EVK{I|L};{[QN]|[E{I|L}]|[KN]}[RV]A{I|L}EVK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N[AG]VEVK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GGQVEVK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GGNE{I|L}VK{I|L} 3.3034;3.0458;2.8951;2.6376;2.5192;2.5192;2.451;2.2617;2.2617;2.111 -;-;-;-;-;-;-;-;-;- 387 1 1.185 49556.3 1.0 9803 5600 15395 HBL1_DMSO_200M_050219_1,15405 HBL1_DMSO_200M_050219_1,15405,KVIEAIRVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15406 75.517 134.0 527320.0 25 0 34555.0 + 5717 DPLIKHTLSL 10 108 568.8354306481845 1135.6563083631688 2 568.8354980349541 MULTI CID FTMS 0 0 0 15395 1391854.625 0.4576686662168419 3 -0.1844863891601562 11 Unmodified _DPLIKHTLSL_ REV__ENSG00000153922|ENST00000614616|CHD1;REV__ENST00000508756.2_1_5:98204705-98207835:-|nuORF;REV__nc|ENSG00000153922|O14646-2|CHD1 19.256988751693697 0.5244284437930726 3 [DP]{I|L}{I|L}QM 6 -1 15.697 0.0 0.0 1.3822 0.0 0.0 0.0 435.2895840802189 435.2895840802189 3.478043754416128 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 [DP]{I|L}{I|L}QM 1.3822 - 209 1 1.185 59909.7 1.0 9804 5600 15395 HBL1_DMSO_200M_050219_1,15406 HBL1_DMSO_200M_050219_1,15406,DPLIKHTLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15407 75.518 37.0 1444500.0 25 0 102780.0 + 951 AFLEQAVSY 9 98 514.2587498116648 1026.5029466901294 2 514.2586547732353 MULTI CID FTMS 0 0 0 15395 1268694.875 0.4564716687881153 3 -0.1844863891601562 12 Unmodified _AFLEQAVSY_ ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693|LPIN1 32.30548876998284 0.1201446275138228 3 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}EQAVSY 9 0 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}EQAV + + 23.856 19.429 2.5619 2.324 2.324 49.163 0.0 0.0 0.0 0.0 -1.2154825374932656 -1.2154825374932656 0.0 0 0.0 0.0 0.2887254899964357 0.0 + + {[MS]|[{M(Oxidation (M))|F}A]}{I|L}EQAVSY 2.324 + + 132 + 1 1.185 47982.3 1.0 9805 5600 15395 HBL1_DMSO_200M_050219_1,15407 HBL1_DMSO_200M_050219_1,15407,AFLEQAVSY True True AFLEQAVSY 75.51837 514.258654773235 43649100.0 15395.0 nc|ENSG00000134324|Q14693|LPIN1;;nc|ENSG00000134324|Q14693-4|LPIN1;;nc|ENSG00000134324|Q14693-5|LPIN1;;nc|ENSG00000134324|Q14693-7|LPIN1;;ENSG00000134324|ENST00000674199|LPIN1;;nc|ENSG00000134324|Q14693-2|LPIN1 5.511280695597331 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15408 75.52 22.0 1871500.0 25 0 157190.0 26889 PDHGRLLRPA 10 64 566.3222542769303 1130.6299556206604 2 566.3226806521416 MULTI CID FTMS 0 0 0 15395 1244522.75 0.2516682957231428 10 -0.6640777587890625 13 Unmodified _PDHGRLLRPA_ ENST00000319084.9_1_1:6640084-6640779:+|nuORF;ENST00000435905.5_1_1:6640084-6640779:+|nuORF 5.296884461304476 0.7021353017287152 3 {I|L}E 2 9 8.5835 0.0 0.0 0.75918 0.0 0.0 342.21152873276714 543.2702730768186 885.4818018095857 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E 0.75918 - 19 + 1 1.185 36190.9 1.0 9806 5600 15395 HBL1_DMSO_200M_050219_1,15408 HBL1_DMSO_200M_050219_1,15408,PDHGRLLRPA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15409 75.521 47.0 941060.0 25 0 108670.0 + 33543 SILHDVVEV 9 67 505.7798149570788 1009.5450769809576 2 505.7801696658134 MULTI CID FTMS 0 0 0 15395 1254627.625 0.351600956274132 -2 0.183349609375 14 Unmodified _SILHDVVEV_ ENSG00000091640|ENST00000206020|SPAG7;ENST00000572148.1_1_17:4863453-4863890:-|nuORF 48.345845343767074 0.0439967357579942 3 {NN|[MP]|[D{I|L}]|[EV]}HVTVV{NN|[MP]|[D{I|L}]|[EV]} 9 4 + 57.366 0.0 0.0 5.6823 5.6823 88.896 0.0 0.0 0.0 15.138793319624575 0.7378621416091846 0.7378621416091846 15.138793319624575 0 0.25 1.154901959985743 0.6203715150305281 0.0 {NN|[MP]|[D{I|L}]|[EV]}HVTVV{NN|[MP]|[D{I|L}]|[EV]};{[TV]|[{I|L}S]}[HV]EVV{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]VVTV[{M(Oxidation (M))|F}T]V;{[TV]|[{I|L}S]}[H{I|L}]DVV{NN|[MP]|[D{I|L}]|[EV]};[HD]{I|L}VTVV{NN|[MP]|[D{I|L}]|[EV]};[H{I|L}]DVTVV{NN|[MP]|[D{I|L}]|[EV]};[H{I|L}][VS]EVV{NN|[MP]|[D{I|L}]|[EV]};[H{I|L}]{[TV]|[{I|L}S]}DVV{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]VAA[Y{I|L}]EV;{[TV]|[{I|L}S]}[HV][{I|L}V]D{NN|[MP]|[D{I|L}]|[EV]} 5.6823;4.1828;4.0028;3.8846;3.8284;3.5302;2.4436;2.1455;1.8752;1.4757 -;-;-;+;-;-;-;-;-;- + 276 1 1.185 41677.7 1.0 9807 5600 15395 HBL1_DMSO_200M_050219_1,15409 HBL1_DMSO_200M_050219_1,15409,SILHDVVEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15410 75.523 77.0 1747100.0 25 0 212320.0 -1 0 102 516.3396357857413 515.3323593191412 1 516.3395873904228 MULTI CID FTMS 0 0 0 15395 1204905.125 0.661003600421759 -1 0.0980377197265625 15 3 {[TV]|[{I|L}S]}A{I|L}{I|L} 5 -1 + 59.227 0.0 0.0 11.493 11.493 92.157 0.0 0.0 0.0 6.276362525516532 13.010299956639813 6.276362525516532 6.276362525516532 0 0.6747425010840047 1.6989700043360187 1.2302046884880935 0.0 {[TV]|[{I|L}S]}A{I|L}{I|L};[{I|L}A]S{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L};{I|L}{I|L}SA{I|L} 11.493;10.275;9.5574;6.2033 -;-;-;- 104 1 1.185 107613.1 1.0 9808 5600 15395 HBL1_DMSO_200M_050219_1,15410 HBL1_DMSO_200M_050219_1,15410, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15411 75.524 59.0 918600.0 25 0 121660.0 + 22076 LPPPTLRI 8 72 453.7921119878436 905.5696710424872 2 453.7924072146416 MULTI CID FTMS 0 0 0 15395 1010377.8125 0.0157753060654573 32 -2.2102813720703125 16 Unmodified _LPPPTLRI_ ENSG00000221821|ENST00000408925|C6orf226 24.020572477871973 0.5389365498350341 3 {I|L}PPPT 5 3 57.92 0.0 0.0 6.3959 0.0 0.0 0.0 397.25534998111567 397.25534998111567 50.92986265876426 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + {I|L}PPPT 6.3959 + + 30 + 1 1.185 45868.8 1.0 9809 5600 15395 HBL1_DMSO_200M_050219_1,15411 HBL1_DMSO_200M_050219_1,15411,LPPPTLRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15412 75.527 123.0 2492500.0 25 0 229620.0 + 40031 VGFSVRQRR 9 200 552.821416112731 1103.6282792922618 2 552.8224365115166 MULTI CID FTMS 0 0 0 15395 683307.25 0.3354118823908605 3 -0.1844863891601562 17 Unmodified _VGFSVRQRR_ REV__ENSG00000188976|ENST00000327044|NOC2L;REV__ENST00000452600.1_1_2:130987586-130988813:+|nuORF;REV__ENST00000477976.5_1_1:880076-889593:-|nuORF;REV__ENST00000483767.5_1_1:880076-882054:-|nuORF 7.910154910731844 0.6385446671287552 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}Y 5 -1 14.922 0.0 0.0 1.352 0.0 0.0 0.0 466.2420137994751 466.2420137994751 5.006691753861308 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}Y 1.352 - 974 + 1 1.185 234718.4 1.0 9810 5600 15395 HBL1_DMSO_200M_050219_1,15412 HBL1_DMSO_200M_050219_1,15412,VGFSVRQRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15413 75.528 48.0 1121300.0 25 0 78710.0 + 3304 AYKPPGFSL 9 82 490.2660838822212 978.5176148312424 2 490.2658874392509 MULTI CID FTMS 0 0 0 15395 691808.625 0.575295650815361 -3 0.2461929321289062 18 Unmodified _AYKPPGFSL_ ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 39.957323273325 0.0756908302845263 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KP 4 5 34.935 0.0 0.0 3.5702 0.0 0.0 0.0 516.2478121393186 516.2478121393186 18.727860753757778 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KP 3.5702 + + 167 + 1 1.185 48661.0 1.0 9811 5600 15395 HBL1_DMSO_200M_050219_1,15413 HBL1_DMSO_200M_050219_1,15413,AYKPPGFSL True True AYKPPGFSL 75.527899 490.2668 21826718.0 15395.0 ENSG00000155561|ENST00000285968|NUP205;;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 7.2491129239400225 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15414 75.531 153.0 559260.0 25 0 63764.0 38767 TVDFYFEEV 9 107 574.7592916255289 1147.5040303178578 2 574.7597534060478 MULTI CID FTMS 0 0 0 15395 678763.9375 0.7949071796577036 3 -0.1844863891601562 19 Unmodified _TVDFYFEEV_ ENSG00000196353|ENST00000429747|CPNE4;nc|ENSG00000196353|Q96A23-2|CPNE4 16.942295170755138 0.3780752226737986 3 {[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V]VP 6 6 33.473 0.0 0.0 2.917 0.0 0.0 0.0 502.1226900690063 502.1226900690063 19.493559221610965 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V]VP 2.917 - 130 + 1 1.185 68434.2 1.0 9812 5600 15395 HBL1_DMSO_200M_050219_1,15414 HBL1_DMSO_200M_050219_1,15414,TVDFYFEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15415 75.537 328.0 418520.0 25 0 94810.0 32705 SEAGLTANQYH 11 143 595.7733697380628 1189.5321865429255 2 595.7737304568291 MULTI CID FTMS 0 0 0 15395 606040.3125 0.3048368121798853 4 -0.3022003173828125 20 Unmodified _SEAGLTANQYH_ chr19:55796250-55798229|20|13.2|0.07|7.56|-|ENST00000593244|NLRP11,NLRP11;ENSG00000179873|ENST00000589093|NLRP11;nc|ENSG00000179873|P59045-2|NLRP11;nc|ENSG00000179873|P59045-3|NLRP11 12.240655878213236 0.7805268987462184 3 YY[VS]{I|L}V 6 10 26.422 0.0 0.0 2.2212 0.0 0.0 0.0 462.1349972188236 462.1349972188236 7.275275824669176 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.930884548956689 0.0 YY[VS]{I|L}V 2.2212 - 1363 1 1.185 103166.5 1.0 9813 5600 15395 HBL1_DMSO_200M_050219_1,15415 HBL1_DMSO_200M_050219_1,15415,SEAGLTANQYH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15417 75.541 30.0 1777800.0 25 0 173720.0 -1 VSMCVSVAAV 10 90 519.751302586657 1037.4880522401138 2 519.7517578005791 MULTI CID FTMS 0 0 0 15416 1461667.875 0.3809115953997731 4 -0.3080978393554687 1 Carbamidomethyl (C),Oxidation (M) _VSM(Oxidation (M))C(Carbamidomethyl (C))VSVAAV_ ENST00000252674.8_2_19:6211645-6212743:-|nuORF 15.847184025352805 0.5816416552707754 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[RE]|[WV]}{I|L}{I|L} 7 -1 34.71 0.0 0.0 3.3455 0.0 0.0 0.0 182.9412742462263 182.9412742462263 17.51689446210399 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[RE]|[WV]}{I|L}{I|L} 3.3455 - 220 1 1.185 44658.6 1.0 9814 5601 15416 HBL1_DMSO_200M_050219_1,15417 HBL1_DMSO_200M_050219_1,15417,VSMCVSVAAV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15418 75.543 51.0 851390.0 25 0 64559.0 + 25602 NFLNMSRSM 9 82 550.2544715783698 1098.4943902235395 2 550.2552978396416 MULTI CID FTMS 0 0 0 15416 822095.3125 0.1440198087491525 4 -0.3080978393554687 2 Unmodified _NFLNMSRSM_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 29.84058131909904 0.1515068451768857 3 N{M(Oxidation (M))|F}{I|L}NM[C(Carbamidomethyl (C))S]{M(Oxidation (M))|F} 8 2 54.245 0.0 0.0 4.9382 0.0 0.0 0.0 82.06693445377186 82.06693445377186 42.255631547766654 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3494850021680094 0.3807196863200844 N{M(Oxidation (M))|F}{I|L}NM[C(Carbamidomethyl (C))S]{M(Oxidation (M))|F} 4.9382 - 182 + 1 1.185 38957.3 1.0 9815 5601 15416 HBL1_DMSO_200M_050219_1,15418 HBL1_DMSO_200M_050219_1,15418,NFLNMSRSM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15419 75.544 39.0 849180.0 25 0 76000.0 30936 RKKAKFSL 8 69 489.314433722016 976.614314510832 2 489.3145324587822 MULTI CID FTMS 0 0 0 15416 5808680.5 0.5254863119072575 4 -0.3080978393554687 3 Unmodified _RKKAKFSL_ ENSG00000186867|ENST00000394427|QRFPR 5.760428011301431 0.7893668129297577 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[SA]|[TG]}P 5 6 20.458 0.0 0.0 2.0947 0.0 0.0 0.0 484.36853138999135 484.36853138999135 7.282249591245389 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[SA]|[TG]}P 2.0947 - 36 1 1.185 34614.4 1.0 9816 5601 15416 HBL1_DMSO_200M_050219_1,15419 HBL1_DMSO_200M_050219_1,15419,RKKAKFSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15420 75.545 74.0 453880.0 25 0 30087.0 20771 LLTSRKELPP 10 71 577.3487213588974 1152.6828897845946 2 577.3490478396416 MULTI CID FTMS 0 0 0 15416 4621143.0 1.0 0 0.0 4 Unmodified _LLTSRKELPP_ ENSG00000137872|ENST00000536845|SEMA6D;nc|ENSG00000137872|Q8NFY4-2|SEMA6D;nc|ENSG00000137872|Q8NFY4-3|SEMA6D;nc|ENSG00000137872|Q8NFY4-4|SEMA6D;nc|ENSG00000137872|Q8NFY4-5|SEMA6D;nc|ENSG00000137872|Q8NFY4-6|SEMA6D 1.6526216038709556 0.7189921496796233 3 Y 1 10 6.9897 0.0 0.0 0.60639 0.0 0.0 210.23832298947588 776.3605932837102 986.598916273186 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.60639 - 5 + 1 1.185 32845.3 1.0 9817 5601 15416 HBL1_DMSO_200M_050219_1,15420 HBL1_DMSO_200M_050219_1,15420,LLTSRKELPP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15421 75.548 134.0 200150.0 25 0 41088.0 38366 TQRLHALKLR 10 51 618.3877996508628 1234.7610463685255 2 618.3881103396416 MULTI CID FTMS 0 0 0 15416 1451272.25 1.0 0 0.0 5 Unmodified _TQRLHALKLR_ nc|ENSG00000087460|O95467|GNAS 1.4819007175156935 0.719781833666733 3 M 1 10 11.783 0.0 0.0 0.95425 0.0 0.0 1085.7098969318051 0.0 1085.7098969318051 0.0 0.5236767526000641 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.95425 - 7 + 1 1.185 30618.9 1.0 9818 5601 15416 HBL1_DMSO_200M_050219_1,15421 HBL1_DMSO_200M_050219_1,15421,TQRLHALKLR False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15422 75.549 19.0 1967500.0 25 0 100580.0 + 2223 AQDEHLITF 9 76 537.2668823739018 1072.5192118146035 2 537.2669555544853 MULTI CID FTMS 0 0 0 15416 1084975.75 0.5946613019893235 -2 0.1354217529296875 6 Unmodified _AQDEHLITF_ ENSG00000144028|ENST00000323853|SNRNP200 17.11289562659939 0.3734572693229295 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}P 6 7 27.457 0.0 0.0 2.5601 0.0 0.0 0.0 389.1094577464973 389.1094577464973 5.902887499330738 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}P 2.5601 - 224 1 1.185 36122.5 1.0 9819 5601 15416 HBL1_DMSO_200M_050219_1,15422 HBL1_DMSO_200M_050219_1,15422,AQDEHLITF False True AQDEHLITF 75.54941 537.266955554485 33911016.0 15416.0 ENSG00000144028|ENST00000323853|SNRNP200 2.266507625579834 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15423 75.554 259.0 152280.0 25 0 17543.0 + 19588 LFYIRLKLSF 10 91 650.3963435347615 1298.778134136323 2 650.3963500857353 MULTI CID FTMS 0 0 0 15416 987329.1875 1.0 0 0.0 7 Unmodified _LFYIRLKLSF_ REV__ENSG00000178104|ENST00000695795|PDE4DIP;REV__ENST00000533845.1_1_1:144946736-144994815:-|nuORF;REV__nc|ENSG00000178104|Q5VU43-10|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-11|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-12|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-3|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-4|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-6|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-7|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-8|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43-9|PDE4DIP;REV__nc|ENSG00000178104|Q5VU43|PDE4DIP 3.944395688203298 0.708391353636983 3 {I|L} 1 -1 10.089 0.0 0.0 0.77678 0.0 0.0 1167.6828410228447 0.0 1167.6828410228447 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.77678 + + 62 + 1 1.185 36806.3 1.0 9820 5601 15416 HBL1_DMSO_200M_050219_1,15423 HBL1_DMSO_200M_050219_1,15423,LFYIRLKLSF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15424 75.556 82.0 862970.0 25 0 95556.0 + 25102 MPYMQPVM 8 114 498.7206400851413 0 498.7206909060478 PEAK CID FTMS 0 0 0 15416 885225.5 1.0 0 0.0 8 Unmodified _MPYMQPVM_ ENSG00000003096|ENST00000540167|KLHL13;ENSG00000198642|ENST00000359039|KLHL9;nc|ENSG00000003096|Q9P2N7-2|KLHL13;nc|ENSG00000003096|Q9P2N7-4|KLHL13;nc|ENSG00000003096|Q9P2N7-5|KLHL13;nc|ENSG00000003096|Q9P2N7|KLHL13 15.768221252438446 0.4767174489346095 3 MQM 3 5 15.802 0.0 0.0 1.5875 0.0 0.0 345.1703521524188 257.09382044010005 602.2641725925188 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 MQM 1.5875 - 115 + 1 1.185 57247.4 1.0 9821 5601 15416 HBL1_DMSO_200M_050219_1,15424 HBL1_DMSO_200M_050219_1,15424,MPYMQPVM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15425 75.562 308.0 789020.0 25 0 78985.0 24593 MLKILKPSI 9 223 521.8402797184303 1041.6660065036606 2 521.8414794802666 MULTI CID FTMS 0 0 0 15416 871230.75 0.4358527513046793 4 -0.3080978393554687 9 Unmodified _MLKILKPSI_ ENSG00000165355|ENST00000298097|FBXO33 18.13498045792455 0.3457906370836843 3 {[TV]|[{I|L}S]}P[WM]{I|L}W 7 8 15.241 0.0 0.0 1.4632 0.0 0.0 0.0 125.18960204492932 125.18960204492932 1.072519916646753 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4105162882498865 0.0 {[TV]|[{I|L}S]}P[WM]{I|L}W 1.4632 - 2917 1 1.185 191692.1 1.0 9822 5601 15416 HBL1_DMSO_200M_050219_1,15425 HBL1_DMSO_200M_050219_1,15425,MLKILKPSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15426 75.565 158.0 683570.0 25 0 54865.0 + 41331 VPILAPRI 8 95 439.79465879941694 877.5747646656339 2 439.7949401736259 MULTI CID FTMS 0 0 0 15416 763102.875 0.0528177169930656 9 -0.6266937255859375 10 Unmodified _VPILAPRI_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 46.92087301778293 0.1537303740847981 3 VP{I|L}{I|L}A[RP]{I|L} 8 0 + 63.0 0.0 0.0 7.1788 7.1788 95.688 0.0 0.0 0.0 36.31711755872863 3.9706496478527455 3.9706496478527455 62.99955520665284 0 0.6747425010840047 1.5228787452803376 0.0 0.2887254899964357 + + VP{I|L}{I|L}A[RP]{I|L} 7.1788 + + 183 + 1 1.185 88042.1 1.0 9823 5601 15416 HBL1_DMSO_200M_050219_1,15426 HBL1_DMSO_200M_050219_1,15426,VPILAPRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15427 75.567 85.0 1107900.0 25 0 166900.0 + 17151 KLIEKLDIKL 10 96 404.9357950900551 1211.7855558703652 3 404.9354431033134 MULTI CID FTMS 0 0 0 15416 733823.5 0.3131169305794888 -1 0.037384033203125 11 Unmodified _KLIEKLDIKL_ ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF 72.18682940623714 0.018866178980947 3 K{I|L}{I|L}EK{I|L}D{I|L}K{I|L} 10 0 + 104.27 0.0 0.0 8.6046 8.6046 84.903 0.0 0.0 0.0 16.53212513775344 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 2.329689690656103 0.0 1.274227503252014 0.2134679910804404 + + K{I|L}{I|L}EK{I|L}D{I|L}K{I|L};K{I|L}{I|L}EK{I|L}D{I|L}{I|L}K;K{I|L}{I|L}[{M(Oxidation (M))|F}V]K[R{I|L}]PV 8.6046;8.4592;2.6506 +;-;- + 1843 + 1 1.185 80718.2 1.0 9824 5601 15416 HBL1_DMSO_200M_050219_1,15427 HBL1_DMSO_200M_050219_1,15427,KLIEKLDIKL True True KLIEKLDIKL 75.566709 404.935443103313 13595122.0 15416.0 ENSG00000167658|ENST00000309311|EEF2;;ENST00000598182.5_1_19:3980752-3982305:-|nuORF 3.886907656987508 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15428 75.573 323.0 377610.0 25 0 43031.0 -1 LCFYTFSTSV 10 158 612.783324262164 1223.552095591128 2 612.7838012576103 MULTI CID FTMS 0 0 0 15416 738218.5625 0.1704755153134868 5 -0.3632888793945312 12 Carbamidomethyl (C) _LC(Carbamidomethyl (C))FYTFSTSV_ Charlie1a_dup2780|chr8:28020475-28021831:+|2.1636511124764484|0.3671273947285381|2.56|48.0|98|3|anti-sense 19.256988751693697 0.5244284437930726 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RD]S 6 -1 34.666 0.0 0.0 2.8332 0.0 0.0 0.0 522.1572951363029 522.1572951363029 9.145293596321125 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RD]S 2.8332 - 835 1 1.185 92737.4 1.0 9825 5601 15416 HBL1_DMSO_200M_050219_1,15428 HBL1_DMSO_200M_050219_1,15428,LCFYTFSTSV False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 15429 75.578 322.0 196710.0 25 0 26618.0 + 8109 EPGVRLRLVPF 11 100 641.8827622598698 0 641.8820678591728 PEAK CID FTMS 0 0 0 15416 726141.25 1.0 0 0.0 13 Unmodified _EPGVRLRLVPF_ REV__ENST00000447595.1_1_1:179054682-179054961:+|nuORF 3.2813086475875832 0.4761840153648598 3 T 1 -1 3.9794 0.0 0.0 0.31047 0.0 0.0 658.4282309632957 519.2531221979124 1177.681353161208 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.31047 - 11 + 1 1.185 53619.0 1.0 9826 5601 15416 HBL1_DMSO_200M_050219_1,15429 HBL1_DMSO_200M_050219_1,15429,EPGVRLRLVPF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15430 75.58 89.0 690240.0 25 0 70485.0 + 30048 TQLDPNKSLLEV 12 93 678.8718214109452 1355.7290898886904 2 678.8730346560478 MULTI CID FTMS 0 0 0 15416 673635.375 1.0 0 0.0 14 Unmodified _QTYYLKISLEV_ ENSG00000185104|ENST00000396153|FAF1;nc|ENSG00000185104|Q9UNN5-2|FAF1 33.4449034751529 0.3133739643825231 3 [NP]K{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V]D{I|L}[NP] 12 10 + 58.381 0.0 0.0 4.3062 4.3062 78.211 0.0 0.0 0.0 7.36371556024956 19.11925749649466 7.36371556024956 5.440228147639203 0 1.424742501084005 0.0 0.4247425010840047 2.055462187404089 [NP]K{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V]D{I|L}[NP];[NP]K{[TV]|[{I|L}S]}{I|L}E[MT]{I|L}[NP];[NP]K{[TV]|[{I|L}S]}{I|L}D[{M(Oxidation (M))|F}V]{I|L}[NP];[NP]K{[TV]|[{I|L}S]}{I|L}EV[{M(Oxidation (M))|F}V][NP];[NP]K{[TV]|[{I|L}S]}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{I|L}NN;[NP]K{[TV]|[{I|L}S]}D{I|L}[{M(Oxidation (M))|F}V]{I|L}[NP];[NP]K{[TV]|[{I|L}S]}{I|L}D{I|L}[{M(Oxidation (M))|F}V][NP];[QT]{I|L}[H{I|L}][Q{I|L}]Y{I|L}EV;[NP]K{[TV]|[{I|L}S]}D{I|L}{I|L}[{M(Oxidation (M))|F}V][NP];[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[RK]RY{I|L}EV 4.3062;3.905;3.4021;3.2229;3.0547;2.958;2.72;2.4655;2.2759;1.9305 -;-;-;-;-;-;-;-;-;- 580 1 1.185 52575.5 1.0 9827 5601 15416 HBL1_DMSO_200M_050219_1,15430 HBL1_DMSO_200M_050219_1,15430,QTYYLKISLEV False False TQLDPNKSLLEV 75.580439 678.873034656048 5789975.0 15416.0 ENSG00000185104|ENST00000396153|FAF1;;nc|ENSG00000185104|Q9UNN5-2|FAF1 5.513415654500325 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15431 75.583 112.0 609980.0 25 0 66155.0 + 34377 SLTLVPHSVPV 11 103 574.836125945584 1147.6576989579678 2 574.8364135622978 MULTI CID FTMS 0 0 0 15416 666803.625 0.4025989924061023 4 -0.3080978393554687 15 Unmodified _SLTLVPHSVPV_ REV__ENSG00000143297|ENST00000361835|FCRL5;REV__ENST00000449287.1_1_1:157606263-157609923:-|nuORF;REV__nc|ENSG00000143297|Q96RD9-3|FCRL5;REV__nc|ENSG00000143297|Q96RD9-4|FCRL5 13.90604991867851 0.7458848613461305 3 EV 2 -1 16.058 0.0 0.0 1.3992 0.0 0.0 901.536603232185 0.0 901.536603232185 0.0 2.245462655597093 0.0 0.0 0 0.0 0.0 0.5 0.0 EV 1.3992 - 177 + 1 1.185 58651.2 1.0 9828 5601 15416 HBL1_DMSO_200M_050219_1,15431 HBL1_DMSO_200M_050219_1,15431,SLTLVPHSVPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15432 75.585 81.0 411090.0 25 0 29520.0 + 29931 QSLEYLEQV 9 87 554.7799020355588 1107.5452511379176 2 554.7805053591728 MULTI CID FTMS 0 0 0 15416 629349.9375 0.2809893977669075 -3 0.220733642578125 16 Unmodified _QSLEYLEQV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 20.453626601364224 0.2830276176381075 3 [Y{I|L}]YY{I|L}E 6 5 30.635 0.0 0.0 2.766 0.0 0.0 0.0 260.12982080028013 260.12982080028013 12.447274948966935 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [Y{I|L}]YY{I|L}E 2.766 - 149 1 1.185 31546.8 1.0 9829 5601 15416 HBL1_DMSO_200M_050219_1,15432 HBL1_DMSO_200M_050219_1,15432,QSLEYLEQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15433 75.593 390.0 336510.0 25 0 35045.0 + 12636 GVLCAVAARWL 11 149 579.826513507642 1157.6384740820838 2 579.8263427615166 MULTI CID FTMS 0 0 0 15416 544842.875 1.0 0 0.0 17 Unmodified _GVLCAVAARWL_ REV__ENSG00000162006|ENST00000543963|MSLNL;REV__nc|ENSG00000162006|Q96KJ4|MSLNL 6.2057823575117 0.8458686499021061 3 V 1 -1 10.485 0.0 0.0 0.90568 0.0 0.0 1040.5591645501486 0.0 1040.5591645501486 0.0 -7.474250108400469 -7.474250108400469 0.0 0 0.0 0.0 0.0 0.0 V 0.90568 + + 294 + 1 1.185 100960.4 1.0 9830 5601 15416 HBL1_DMSO_200M_050219_1,15433 HBL1_DMSO_200M_050219_1,15433,GVLCAVAARWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15434 75.594 44.0 546030.0 25 0 46932.0 + -1 QNCCRSCFIQ 10 53 686.784341316866 1371.5541297005318 2 686.7869750857353 MULTI CID FTMS 0 0 0 15416 436244.40625 0.8954542477629233 -1 0.037384033203125 18 3 Carbamidomethyl (C) _QNC(Carbamidomethyl (C))C(Carbamidomethyl (C))RSC(Carbamidomethyl (C))FIQ_ REV__ENSG00000115020|ENST00000264380|PIKFYVE;REV__nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 15.248480904072842 0.5916873121453583 3 E{I|L}[HS] 4 -1 28.188 0.0 0.0 2.0552 0.0 0.0 887.3143788068375 0.0 887.3143788068375 0.0 14.23516269895728 0.0 0.0 0 1.0 0.0 0.5 0.0 E{I|L}[HS] 2.0552 - 45 1 1.185 25628.2 1.0 9831 5601 15416 HBL1_DMSO_200M_050219_1,15434 HBL1_DMSO_200M_050219_1,15434,QNCCRSCFIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15435 75.602 473.0 232020.0 25 0 54438.0 + -1 CDEWWRQCDEK 11 117 777.8067631544496 1553.5989733756992 2 777.8083373904228 MULTI CID FTMS 0 0 0 15416 413505.46875 0.0339772856221861 13 -0.9698104858398438 19 Carbamidomethyl (C) _C(Carbamidomethyl (C))DEWWRQCDEK_ REV__ENSG00000165457|ENST00000298223|FOLR2 2.735195868890462 0.8622431031272658 3 YYD[DG]YVGNYYY 12 -1 + 59.139 0.0 0.0 3.8066 3.8066 69.353 0.0 0.0 0.0 4.255632498907779 7.447274948966935 4.255632498907779 0.4402281476392033 0 0.4247425010840047 2.0 1.5114393726401687 0.4247425010840047 YYD[DG]YVGNYYY;YYD[DG]VYGNYYY;[YN]GVGDDYYYYY;YYD[DG]V[NG]YYYY;YYD{[DS]|[MA]|[CV]|TT}[MT]GNYYY;YYD{[DS]|[MA]|[CV]|TT}DKC(Carbamidomethyl (C))YYY;YYD[DG]YVGGGYYY;YYD[DG]VYGGGYYY;[NG]YVGDDYYYYY;[YN]GRDD[DP]NYYY 3.8066;3.7782;3.5326;3.4909;3.0053;2.9948;2.9475;2.9192;2.7563;2.5687 -;-;-;-;-;-;-;-;-;- 2485 1 1.185 79226.8 1.0 9832 5601 15416 HBL1_DMSO_200M_050219_1,15435 HBL1_DMSO_200M_050219_1,15435,CDEWWRQCDEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15436 75.611 473.0 191190.0 25 0 23505.0 + 45928 YYYDGDIGNYY 11 127 703.2827151770417 1404.5508774208834 2 703.2833740115166 MULTI CID FTMS 0 0 0 15416 398712.75 0.038506809315974 11 -0.7595062255859375 20 Unmodified _YYYDGDIGNYY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 10.073929032068715 0.8255972128077141 3 YY 2 9 16.454 0.0 0.0 1.1715 0.0 0.0 1060.4133588993147 0.0 1060.4133588993147 0.0 4.771212547196624 0.0 0.0 0 0.0 0.0 0.0 0.0 + YY 1.1715 + + 281 + 1 1.185 70988.9 1.0 9833 5601 15416 HBL1_DMSO_200M_050219_1,15436 HBL1_DMSO_200M_050219_1,15436,YYYDGDIGNYY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15438 75.615 33.0 1506400.0 25 0 216270.0 27474 PKGILGSFPTA 11 67 544.3097582509859 1086.6049635687716 2 544.3094360232353 MULTI CID FTMS 0 0 0 15437 1978128.5 0.5432763381104261 5 -0.3613662719726562 1 Unmodified _PKGILGSFPTA_ nc|ENSG00000124678|Q8WWU5-2|TCP11 2.9952420565917617 0.861016188266951 3 {I|L} 1 10 4.6041 0.0 0.0 0.42371 0.0 0.0 520.3095063738805 450.1825350397094 970.49204141359 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.42371 + + 9 + 1 1.179 43672.9 1.0 9834 5602 15437 HBL1_DMSO_200M_050219_1,15438 HBL1_DMSO_200M_050219_1,15438,PKGILGSFPTA False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15439 75.618 131.0 271010.0 25 0 26485.0 + 26261 NQLRELRRL 9 71 599.361735480312 1196.7089180274238 2 599.3621093630791 MULTI CID FTMS 0 0 0 15437 1038553.0625 0.2143909708338928 5 -0.3613662719726562 2 Unmodified _NQLRELRRL_ REV__ENSG00000111877|ENST00000619706|MCM9;REV__nc|ENSG00000111877|Q9NXL9-4|MCM9 4.3292370932331545 0.7635526921153418 3 {[QN]|[E{I|L}]|[KN]}{I|L} 3 -1 11.325 0.0 0.0 0.94631 0.0 0.0 0.0 838.5006410100988 838.5006410100988 5.839993556128109 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}{I|L} 0.94631 + + 29 1 1.179 33757.5 1.0 9835 5602 15437 HBL1_DMSO_200M_050219_1,15439 HBL1_DMSO_200M_050219_1,15439,NQLRELRRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15440 75.619 5.6 9231500.0 25 0 879940.0 + 10580 FVIRNIVEA 9 63 530.8111930196629 1059.6078331061258 2 530.8109619021416 MULTI CID FTMS 0 0 0 15437 10309035.0 0.3631447929356055 -2 0.1113510131835937 3 Unmodified _FVIRNIVEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 32.30548876998284 0.1201446275138228 3 [KA][R{I|L}]HHVEA 9 4 [KA][R{I|L}]HHV + + 21.058 -9.2967 -1.1048 1.9873 1.9873 48.819 0.0 0.0 0.0 0.0 7.870156338638594 0.0 0.0 0 0.5 0.0 0.5 0.0 [KA][R{I|L}]HHVEA 1.9873 - 52 + 1 1.179 44495.1 1.0 9836 5602 15437 HBL1_DMSO_200M_050219_1,15440 HBL1_DMSO_200M_050219_1,15440,FVIRNIVEA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15441 75.621 55.0 1180800.0 25 0 177230.0 + 27684 PLITGTRLAV 10 84 520.8259146440049 1039.6372763548095 2 520.8271972537041 MULTI CID FTMS 0 0 0 15437 1612466.125 0.9483405272722368 -1 0.0739669799804687 4 Unmodified _PLITGTRLAV_ REV__ENSG00000130518|ENST00000392413|IQCN 13.90604991867851 0.6142120002215601 3 [{I|L}V]{[RE]|[WV]}Q{I|L}{I|L}G{I|L} 9 -1 + 31.773 0.0 0.0 3.0562 3.0562 79.415 0.0 0.0 0.0 5.430599746173218 18.27861717482128 5.430599746173218 9.208187539523752 0 0.5629529932484498 1.3010299956639813 0.0 0.0 [{I|L}V]{[RE]|[WV]}Q{I|L}{I|L}G{I|L};[{I|L}V]{[RE]|[WV]}[AG]{I|L}{I|L}G{I|L} 3.0562;2.1705 -;- 86 1 1.179 55608.9 1.0 9837 5602 15437 HBL1_DMSO_200M_050219_1,15441 HBL1_DMSO_200M_050219_1,15441,PLITGTRLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15442 75.622 42.0 1098300.0 25 0 100810.0 + 42536 VTLVGRPTL 9 67 478.3003648756762 954.5861768181524 2 478.3004028201103 MULTI CID FTMS 0 0 0 15437 1452858.375 0.6493163022770408 1 -0.0731353759765625 5 Unmodified _VTLVGRPTL_ REV__ENSG00000063176|ENST00000245222|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-2|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-3|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-4|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-5|SPHK2 24.020572477871973 0.2255576514309169 3 R{I|L}VT{I|L} 5 -1 44.196 0.0 0.0 4.6299 0.0 0.0 354.19148451972814 0.0 354.19148451972814 0.0 21.264100213633768 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 R{I|L}VT{I|L} 4.6299 - 109 1 1.179 44063.4 1.0 9838 5602 15437 HBL1_DMSO_200M_050219_1,15442 HBL1_DMSO_200M_050219_1,15442,VTLVGRPTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15443 75.623 47.0 1297600.0 25 0 169130.0 + 3044 AVLDTGASIHL 11 82 548.8039698998225 1095.593386866445 2 548.8040649294853 MULTI CID FTMS 0 0 0 15437 1320874.5 1.0 0 0.0 6 Unmodified _AVLDTGASIHL_ ENSG00000164002|ENST00000415550|EXO5 65.23502041540118 0.047899150100457 3 {[VA]|[{I|L}G]}{I|L}DTGAS{I|L}H{I|L} 11 0 + 91.846 0.0 0.0 8.3833 8.3833 82.615 0.0 0.0 0.0 58.94866485762992 9.885705382192173 9.885705382192173 0.5551732784983017 0 0.805462187404089 2.0 1.2302046884880935 0.0 + + {[VA]|[{I|L}G]}{I|L}DTGAS{I|L}H{I|L};{[VA]|[{I|L}G]}{I|L}DTQS{I|L}H{I|L};{[VA]|[{I|L}G]}{I|L}DT[KA]EH{I|L};{[VA]|[{I|L}G]}{I|L}D[C(Carbamidomethyl (C))R]{I|L}H{I|L};{[VA]|[{I|L}G]}{I|L}D[KS][DV]H{I|L};{[VA]|[{I|L}G]}{I|L}D[H{I|L}][C(Carbamidomethyl (C))R]{I|L};{[VA]|[{I|L}G]}{I|L}{[QG]|[NA]}[NP]D{I|L}{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}{I|L}{[QG]|[NA]}YY{I|L}{[VA]|[{I|L}G]};[H{I|L}]{[QS]|[NT]}T{I|L}D{I|L}{[VA]|[{I|L}G]};[H{I|L}]{[QS]|[NT]}TD{I|L}{I|L}{[VA]|[{I|L}G]} 8.3833;8.3326;6.4604;5.9522;4.5087;3.7441;3.189;3.0243;2.1887;1.9862 +;-;-;-;-;-;-;-;-;- + 487 + 1 1.179 55061.2 1.0 9839 5602 15437 HBL1_DMSO_200M_050219_1,15443 HBL1_DMSO_200M_050219_1,15443,AVLDTGASIHL True True AVLDTGASIHL 75.623091 548.804064929485 8506179.0 15437.0 ENSG00000164002|ENST00000415550|EXO5 6.760941346486409 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15444 75.624 48.0 950190.0 25 0 173730.0 + 41936 VQIDDSYLVEA 11 58 626.3089463894364 1250.6033398456727 2 626.3089477419853 MULTI CID FTMS 0 0 0 15437 1095955.0 0.5799931969720042 -4 0.2947006225585937 7 Unmodified _VQIDDSYLVEA_ ENSG00000140548|ENST00000268154|ZNF710 22.65808497894818 0.560183898709508 3 {NN|[MP]|[D{I|L}]|[EV]}QD[WY]{I|L}[W{I|L}] 9 7 + 33.847 0.0 0.0 2.7065 2.7065 67.054 0.0 0.0 0.0 8.886212296537018 15.174837133936316 8.886212296537018 0.457574905606755 0 0.4247425010840047 1.0 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}QD[WY]{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}QD[VS]Y{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}[AG]D[WY]{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}[AG]D[VS]Y{I|L}[W{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}ED[WY]{I|L}[W{I|L}];{[CP]|[EA]}[VG]D[WY]{I|L}[W{I|L}];{[CP]|[EA]}[VG]D[VS]Y{I|L}[W{I|L}];{[CP]|[EA]}[RD][WY]{I|L}[W{I|L}];{[CP]|[EA]}[RD][VS]Y{I|L}[W{I|L}];[PG][WM][WY]{I|L}[W{I|L}] 2.7065;2.6699;1.9702;1.9371;1.6661;1.5884;1.5553;1.4476;1.411;0.16778 -;-;-;-;-;-;-;-;-;- 104 1 1.179 41785.8 1.0 9840 5602 15437 HBL1_DMSO_200M_050219_1,15444 HBL1_DMSO_200M_050219_1,15444,VQIDDSYLVEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15445 75.627 126.0 1013000.0 25 0 216110.0 + 32241 RWPDYVREL 9 103 617.3225132351072 1232.6304735370145 2 617.3226806521416 MULTI CID FTMS 0 0 0 15437 759349.125 0.1444477253095115 -14 1.010284423828125 8 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 32.037481411007896 0.1235546156350648 3 {I|L}{M(Oxidation (M))|F}RVY[DP]W 8 8 55.667 0.0 0.0 4.5161 0.0 0.0 0.0 153.07833276920158 153.07833276920158 42.40607743061043 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.805462187404089 {I|L}{M(Oxidation (M))|F}RVY[DP]W 4.5161 - 530 + 1 1.179 97704.0 1.0 9841 5602 15437 HBL1_DMSO_200M_050219_1,15445 HBL1_DMSO_200M_050219_1,15445,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15446 75.631 201.0 974410.0 25 0 88453.0 + 18786 LAPLAKVI 8 152 412.7839829502703 823.5534129673406 2 412.7835876345634 MULTI CID FTMS 0 0 0 15437 556582.625 0.0614706845481332 8 -0.5527267456054688 9 Unmodified _LAPLAKVI_ ENSG00000105679|ENST00000222286|GAPDHS;ENSG00000111640|ENST00000229239|GAPDH;ENST00000423411.2_1_6:135940529-135940997:-|nuORF;ENST00000455134.1_1_10:93426952-93427153:-|nuORF;ENST00000515281.1_1_11:88141588-88141981:-|nuORF;nc|ENSG00000111640|P04406-2|GAPDH 40.44857923139169 0.2267865117615937 3 [{I|L}A]P{I|L}AKV{I|L} 8 0 + 59.506 0.0 0.0 7.2255 7.2255 82.731 0.0 0.0 0.0 8.99874508449237 4.3933269383026285 4.3933269383026285 1.9647231237311047 0 0.8807196863200843 2.0 0.0 0.3054621874040891 + + [{I|L}A]P{I|L}AKV{I|L};[{I|L}A]PKV{I|L}A{I|L};[{I|L}A]P{I|L}AK{I|L}V;[{I|L}A]{I|L}PAKV{I|L};[{I|L}A]{I|L}PAK{I|L}V;[{I|L}P]AKV{I|L}A{I|L};[{I|L}A]KPV{I|L}A{I|L};[{I|L}A]KVP{I|L}A{I|L};[{I|L}A]P{I|L}[K{I|L}]G{I|L};[{I|L}A]P{I|L}[K{I|L}]AV 7.2255;6.9869;6.692;6.4045;5.8711;5.8626;5.5263;5.3179;5.2118;4.6784 +;-;-;-;-;-;-;-;-;- + 406 + 1 1.179 152656.3 1.0 9842 5602 15437 HBL1_DMSO_200M_050219_1,15446 HBL1_DMSO_200M_050219_1,15446,LAPLAKVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15447 75.632 69.0 810450.0 25 0 75511.0 + 4950 DGNAILREI 9 105 500.77620841879104 999.537863904382 2 500.7757446169853 MULTI CID FTMS 0 0 0 15437 554049.9375 0.3975638047194069 -2 0.1113510131835937 10 Unmodified _DGNAILREI_ ENSG00000163468|ENST00000295688|CCT3;ENST00000368256.3_1_1:156302875-156308050:-|nuORF 17.44264345198275 0.3645313841742926 3 [DG]NA{I|L}{I|L}[W{I|L}]V 9 3 [DG]N + + 26.616 8.8287 3.0859 2.6629 2.6629 49.611 0.0 0.0 0.0 0.0 12.012131247412512 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 [DG]NA{I|L}{I|L}[W{I|L}]V 2.6629 - 225 + 1 1.179 47032.5 1.0 9843 5602 15437 HBL1_DMSO_200M_050219_1,15447 HBL1_DMSO_200M_050219_1,15447,DGNAILREI False True DGNAILREI 75.632455 500.775744616985 13567781.0 15437.0 ENST00000368256.3_1_1:156302875-156308050:-|nuORF;;ENSG00000163468|ENST00000295688|CCT3 3.776857058207194 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15448 75.634 46.0 1388700.0 25 0 139560.0 + 29776 QPYMPIPHV 9 92 541.2771908823693 1080.5398288315384 2 541.2798339724541 MULTI CID FTMS 0 0 0 15437 624184.375 0.4123268297089512 -6 0.4096298217773437 11 Unmodified _QPYMPIPHV_ ENSG00000174106|ENST00000308330|LEMD3 19.438996006549623 0.310492472477042 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KMP{I|L}PHV 9 2 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K + + 22.924 7.6761 1.9775 2.1216 2.1216 48.945 0.0 0.0 0.0 0.0 6.828246417146495 0.0 0.0 0 0.5 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KMP{I|L}PHV 2.1216 - 154 + 1 1.179 55157.2 1.0 9844 5602 15437 HBL1_DMSO_200M_050219_1,15448 HBL1_DMSO_200M_050219_1,15448,QPYMPIPHV False True QPYMPIPHV 75.63372 541.279833972454 21424538.0 15437.0 ENSG00000174106|ENST00000308330|LEMD3 5.823709011077881 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15449 75.636 101.0 349050.0 25 0 36725.0 39004 TVRMASCTV 9 69 484.2378894856556 966.4612260381112 2 484.7395507693291 MULTI CID FTMS 0 0 0 15437 446929.03125 0.3124081237961727 5 -0.3613662719726562 12 Unmodified _TVRMASCTV_ ENST00000261405.9_1_12:6155951-6161856:-|nuORF 12.531546534597751 0.4974689918368763 3 TV 2 7 14.425 0.0 0.0 1.4925 0.0 0.0 748.3328671287347 0.0 748.3328671287347 0.0 1.4659125070036083 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 + TV 1.4925 + + 63 + 1 1.179 31916.2 1.0 9845 5602 15437 HBL1_DMSO_200M_050219_1,15449 HBL1_DMSO_200M_050219_1,15449,TVRMASCTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15450 75.641 267.0 536930.0 25 0 38482.0 + 4869 DGATILKL 8 129 415.75265823382784 829.4907635344557 2 415.7527953982353 MULTI CID FTMS 0 0 0 15437 457505.96875 0.3552095310984798 -2 0.1113510131835937 13 Unmodified _DGATILKL_ ENSG00000120438|ENST00000321394|TCP1;ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;nc|ENSG00000135624|Q99832-3|CCT7 68.08070601005525 0.1147890174299629 3 [DG]AT{I|L}{I|L}K{I|L} 8 0 [DG] + + 53.434 16.734 9.7263 6.4417 6.4417 60.458 0.0 0.0 0.0 0.0 32.46449667639184 0.0 0.0 0 1.339136830878453 0.0 0.5 0.2302046884880938 + + [DG]AT{I|L}{I|L}K{I|L} 6.4417 + + 171 + 1 1.179 115122.3 1.0 9846 5602 15437 HBL1_DMSO_200M_050219_1,15450 HBL1_DMSO_200M_050219_1,15450,DGATILKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15451 75.644 157.0 652660.0 25 0 57751.0 + 15816 ISGPLLHLSL 10 133 525.3214204461997 1048.6282879591993 2 525.3214599490166 MULTI CID FTMS 0 0 0 15437 419170.65625 1.0 0 0.0 14 Unmodified _ISGPLLHLSL_ REV__ENST00000517833.1_1_8:144063596-144063734:-|nuORF 22.736283301280096 0.4578556481593033 3 [H{I|L}]KKST 6 -1 31.004 0.0 0.0 2.9566 0.0 0.0 0.0 351.16803919010005 351.16803919010005 14.136890462689134 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 [H{I|L}]KKST 2.9566 - 1934 + 1 1.179 86729.4 1.0 9847 5602 15437 HBL1_DMSO_200M_050219_1,15451 HBL1_DMSO_200M_050219_1,15451,ISGPLLHLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15452 75.646 65.0 551640.0 25 0 25072.0 + 26259 NQLMCEMQDNY 11 69 694.767778828687 1387.521004724174 2 694.7682983279228 MULTI CID FTMS 0 0 0 15437 430564.0625 0.6959534831188705 -2 0.1113510131835937 15 Unmodified _NQLMCEMQDNY_ REV__ENST00000451446.1_1_13:24697062-24697869:-|nuORF 8.155526934196011 0.8366696279279818 3 {I|L}E 2 -1 24.464 0.0 0.0 1.7631 0.0 0.0 0.0 1142.3947237604127 1142.3947237604127 9.75895023531386 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}E 1.7631 - 41 + 1 1.179 31097.5 1.0 9848 5602 15437 HBL1_DMSO_200M_050219_1,15452 HBL1_DMSO_200M_050219_1,15452,NQLMCEMQDNY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15453 75.648 93.0 415070.0 25 0 55329.0 27893 PLSPDPLLS 9 72 469.7622497003771 937.5099464675542 2 469.7637817263603 MULTI CID FTMS 0 0 0 15437 404686.65625 0.7338241030724117 1 -0.0731353759765625 16 Unmodified _PLSPDPLLS_ ENSG00000063176|ENST00000245222|SPHK2;nc|ENSG00000063176|Q9NRA0-2|SPHK2;nc|ENSG00000063176|Q9NRA0-3|SPHK2;nc|ENSG00000063176|Q9NRA0-4|SPHK2;nc|ENSG00000063176|Q9NRA0-5|SPHK2 28.486842064014134 0.1687311288560894 3 [{I|L}P]SPK 5 5 30.903 0.0 0.0 3.2963 0.0 0.0 0.0 412.1774284498465 412.1774284498465 5.841218823962109 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 [{I|L}P]SPK 3.2963 - 145 1 1.179 35377.4 1.0 9849 5602 15437 HBL1_DMSO_200M_050219_1,15453 HBL1_DMSO_200M_050219_1,15453,PLSPDPLLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15454 75.658 580.0 309360.0 25 0 29032.0 + 45722 YYFDYKEQL 9 182 634.7953867901278 1267.5762206470556 2 634.7953979372978 MULTI CID FTMS 0 0 0 15437 267274.28125 0.0836015763056652 8 -0.5527267456054688 17 Unmodified _YYFDYKEQL_ ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF 17.11289562659939 0.3734572693229295 3 YY{M(Oxidation (M))|F}DY 5 4 44.693 0.0 0.0 3.5258 0.0 0.0 0.0 513.2675875299436 513.2675875299436 11.909138666083123 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + YY{M(Oxidation (M))|F}DY 3.5258 + + 1043 + 1 1.179 137012.6 1.0 9850 5602 15437 HBL1_DMSO_200M_050219_1,15454 HBL1_DMSO_200M_050219_1,15454,YYFDYKEQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15455 75.672 800.0 216170.0 25 0 12168.0 + 6014 DSALLPAV 8 205 393.2229835407516 784.4314141483031 2 393.2237731814384 MULTI CID FTMS 0 0 0 15437 278418.53125 0.7993099986497828 1 -0.0731353759765625 18 Unmodified _DSALLPAV_ ENSG00000269404|ENST00000595883|SPIB;nc|ENSG00000269404|Q01892-3|SPIB 70.86452775946826 0.1107857762478427 3 {[DS]|[MA]|[CV]|TT}A{I|L}{I|L} 5 3 24.49 0.0 0.0 3.122 0.0 0.0 0.0 282.1439440157438 282.1439440157438 10.510592250701611 0.0 0.0 0.0 0 0.5 0.1426675035687315 1.2376954943324543 0.0 + {[DS]|[MA]|[CV]|TT}A{I|L}{I|L} 3.122 + + 172 1 1.179 136975.0 0.9800000190734864 9851 5602 15437 HBL1_DMSO_200M_050219_1,15455 HBL1_DMSO_200M_050219_1,15455,DSALLPAV True True DSALLPAV 75.671507 393.223773181438 1438437.75 15437.0 ENSG00000269404|ENST00000595883|SPIB;;nc|ENSG00000269404|Q01892-3|SPIB 5.429970900217692 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15456 75.674 108.0 298710.0 25 0 46056.0 + -1 DQCEDMDFCQL 11 61 702.2516962497018 1402.4888395662035 2 702.7537109255791 MULTI CID FTMS 0 0 0 15437 261855.109375 1.0 0 0.0 19 Carbamidomethyl (C) _DQC(Carbamidomethyl (C))EDMDFCQL_ REV__ENSG00000049323|ENST00000404816|LTBP1;REV__nc|ENSG00000049323|Q14766-2|LTBP1;REV__nc|ENSG00000049323|Q14766-3|LTBP1;REV__nc|ENSG00000049323|Q14766-4|LTBP1;REV__nc|ENSG00000049323|Q14766-5|LTBP1 2.9952420565917617 0.861016188266951 3 Y 1 -1 13.495 0.0 0.0 0.96221 0.0 0.0 1221.4143594410066 0.0 1221.4143594410066 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.96221 - 26 + 1 1.179 28311.0 1.0 9852 5602 15437 HBL1_DMSO_200M_050219_1,15456 HBL1_DMSO_200M_050219_1,15456,DQCEDMDFCQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15457 75.684 589.0 400730.0 25 0 105270.0 + 4679 DAYVLPKLYVK 11 198 654.8817637143413 1307.7489744954826 2 654.8838378787041 MULTI CID FTMS 0 0 0 15437 255645.875 0.0397918981672083 10 -0.6855392456054688 20 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 26.020703789607367 0.4812285719068541 3 {[DA]|[EG]}YV{I|L} 5 6 46.242 0.0 0.0 3.536 0.0 0.0 0.0 743.4467853150259 743.4467853150259 28.08159703347442 0.0 0.0 0.0 0 1.305462187404089 1.0969100130080565 0.0 0.0 + {[DA]|[EG]}YV{I|L} 3.536 + + 414 + 1 1.179 175024.6 1.0 9853 5602 15437 HBL1_DMSO_200M_050219_1,15457 HBL1_DMSO_200M_050219_1,15457,DAYVLPKLYVK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15459 75.688 2.6 13974000.0 25 0 2937500.0 + 26207 NQIEDNDDFQL 11 54 675.7940088956558 1349.5734648581115 2 675.7950927615166 MULTI CID FTMS 0 0 0 15458 19638506.0 1.0 0 0.0 1 Unmodified _NQIEDNDDFQL_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 38.61474834105838 0.2337350513322792 3 {[QN]|[E{I|L}]|[KN]}{I|L}EDG[DG]D 9 5 40.864 0.0 0.0 3.0279 0.0 0.0 0.0 403.1971086470191 403.1971086470191 23.244171855527963 0.0 0.0 0.0 0 0.0 0.0 0.0 1.1989700043360187 {[QN]|[E{I|L}]|[KN]}{I|L}EDG[DG]D 3.0279 - 171 1 1.179 34477.1 1.0 9854 5603 15458 HBL1_DMSO_200M_050219_1,15459 HBL1_DMSO_200M_050219_1,15459,NQIEDNDDFQL False True NQIEDNDDFQL 75.68834 675.795092761517 735647040.0 15458.0 ENSG00000163535|ENST00000357799|SGO2;;nc|ENSG00000163535|Q562F6-2|SGO2 9.189473787943522 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15460 75.69 41.0 1390200.0 25 0 196080.0 + 18562 LAAEFLKQV 9 96 509.7994184317033 1017.5842839302068 2 509.8006164431572 MULTI CID FTMS 0 0 0 15458 750016.9375 0.3731790749535014 2 -0.1609954833984375 2 Unmodified _LAAEFLKQV_ ENSG00000135624|ENST00000258091|CCT7;ENST00000406551.2_1_6:150201187-150201547:+|nuORF;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 74.42276476219924 0.019389277360085 3 [{I|L}A]AE{M(Oxidation (M))|F}{I|L}KQV 9 0 + 53.584 0.0 0.0 5.2658 5.2658 76.943 0.0 0.0 0.0 25.20689673945462 2.218487496163561 2.218487496163561 2.218487496163561 0 1.1237125054200234 1.5228787452803376 0.0 1.3807196863200843 + + [{I|L}A]AE{M(Oxidation (M))|F}{I|L}KQV;[{I|L}A]AE{M(Oxidation (M))|F}{I|L}KN{I|L};[{I|L}A]AE{M(Oxidation (M))|F}{I|L}NK{I|L};[{I|L}A]AE{M(Oxidation (M))|F}{I|L}K[AG]V;[{I|L}A]AE{M(Oxidation (M))|F}{I|L}GGK{I|L};[{I|L}A]AE{M(Oxidation (M))|F}{I|L}KGG{I|L};[{I|L}A]VV{[{M(Oxidation (M))|F}D]|MM}KQV;[{I|L}A]VV{[{M(Oxidation (M))|F}D]|MM}KN{I|L};[{I|L}A]VV{[{M(Oxidation (M))|F}D]|MM}NK{I|L} 5.2658;5.0478;4.9012;4.0413;3.9963;3.8232;2.8816;2.6636;2.517 +;-;-;-;-;-;-;-;- + 657 + 1 1.179 49273.5 1.0 9855 5603 15458 HBL1_DMSO_200M_050219_1,15460 HBL1_DMSO_200M_050219_1,15460,LAAEFLKQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15461 75.691 23.0 2608300.0 25 0 263590.0 + 765 AERIWLVL 8 84 500.3044224539547 998.5942919747094 2 500.3046142458916 MULTI CID FTMS 0 0 0 15458 1116409.75 0.0205435822291837 -4 0.2825241088867187 3 Unmodified _AERIWLVL_ REV__ENST00000251343.9_1_14:24906506-24906650:+|nuORF 24.67388899826682 0.525179942228231 3 VWA{I|L}{I|L}WV{I|L} 8 -1 + 54.039 0.0 0.0 5.4115 5.4115 86.703 0.0 0.0 0.0 14.195925227640984 8.364875295848442 8.364875295848442 9.771212547196626 0 0.9247425010840048 0.0 0.0 0.0 VWA{I|L}{I|L}WV{I|L};VWA{I|L}{I|L}W{I|L}V;{[QN]|[E{I|L}]|[KN]}K[VP]AMV{I|L} 5.4115;4.433;2.4538 -;-;- 161 + 1 1.179 50319.3 1.0 9856 5603 15458 HBL1_DMSO_200M_050219_1,15461 HBL1_DMSO_200M_050219_1,15461,AERIWLVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15462 75.692 20.0 2571000.0 25 0 262060.0 + 30919 RIYNEIPDI 9 74 566.8018531832647 1131.589153433329 2 566.8030883669853 MULTI CID FTMS 0 0 0 15458 1021171.1875 0.6351733842278398 2 -0.1609954833984375 4 Unmodified _RIYNEIPDI_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 16.149105407346934 0.3995459350917656 3 E{I|L}PD{I|L} 5 4 30.075 0.0 0.0 2.6578 0.0 0.0 546.2906361310562 0.0 546.2906361310562 0.0 23.0854562117252 0.0 0.0 0 1.024227503252014 0.0 0.0 0.0 + E{I|L}PD{I|L} 2.6578 + + 40 1 1.179 43846.2 1.0 9857 5603 15458 HBL1_DMSO_200M_050219_1,15462 HBL1_DMSO_200M_050219_1,15462,RIYNEIPDI False True RIYNEIPDI 75.691875 566.803088366985 25618090.0 15458.0 nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 4.868503888448079 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15463 75.693 37.0 1305700.0 25 0 141720.0 15901 ISSWTCLLDL 10 83 575.796190083634 1149.577827234068 2 575.7969238162041 MULTI CID FTMS 0 0 0 15458 940258.25 0.8767406885582614 -1 0.0731353759765625 5 Unmodified _ISSWTCLLDL_ ENSG00000103184|ENST00000251170|SEC14L5 29.081581746732265 0.3152867722954398 3 {[QN]|[E{I|L}]|[KN]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}C(Carbamidomethyl (C))K{I|L}EV 9 7 + 38.662 0.0 0.0 3.3632 3.3632 73.142 0.0 0.0 0.0 2.911575424508122 18.713556777153933 2.911575424508122 3.226372801696876 0 0.0 1.154901959985743 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}C(Carbamidomethyl (C))K{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[PA]{[YC]|[HE]}K{I|L}EV;{[QN]|[E{I|L}]|[KN]}[PG]{[YC]|[HE]}K{I|L}EV;{[QN]|[E{I|L}]|[KN]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[CG]K{I|L}EV;[{I|L}T][C(Carbamidomethyl (C))K]C(Carbamidomethyl (C))K{I|L}EV;{[VA]|[{I|L}G]}[EP]{[YC]|[HE]}K{I|L}EV;{[CP]|[EA]}[VP]{[YC]|[HE]}K{I|L}EV;[{I|L}T][C(Carbamidomethyl (C))K][CG]K{I|L}EV;[K{I|L}]VD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][RN]V 3.3632;3.0825;2.9083;2.5621;1.8852;1.6816;1.3355;1.0842;0.35689 -;-;-;-;-;-;-;-;- 218 1 1.179 45749.3 1.0 9858 5603 15458 HBL1_DMSO_200M_050219_1,15463 HBL1_DMSO_200M_050219_1,15463,ISSWTCLLDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15464 75.694 49.0 1735600.0 25 0 136790.0 + 30768 RIADSFQVI 9 109 524.7932808879171 1047.5720088426342 2 524.7937499880791 MULTI CID FTMS 0 0 0 15458 777558.875 0.5081856214128958 -4 0.2825241088867187 6 Unmodified _RIADSFQVI_ ENSG00000266412|ENST00000581486|NCOA4;nc|ENSG00000266412|Q13772-3|NCOA4;nc|ENSG00000266412|Q13772-4|NCOA4 26.268140514670165 0.1969607489560049 3 [AG]A[KQ]S{M(Oxidation (M))|F}QV{I|L} 10 4 + 56.489 0.0 0.0 5.3924 5.3924 84.835 0.0 0.0 0.0 5.985994592184554 31.99600975727897 5.985994592184554 9.050244867691433 0 0.805462187404089 1.3979400086720375 0.75 0.0 [AG]A[KQ]S{M(Oxidation (M))|F}QV{I|L};[QA][KQ]S{M(Oxidation (M))|F}QV{I|L};[AG]A[KQ]S{M(Oxidation (M))|F}[AG]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WK]{M(Oxidation (M))|F}QV{I|L};{[QN]|[E{I|L}]|[KN]}VNS{M(Oxidation (M))|F}QV{I|L};[KA]QQS{M(Oxidation (M))|F}QV{I|L};[QA][KQ]S{M(Oxidation (M))|F}[AG]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WK]{M(Oxidation (M))|F}[AG]V{I|L};{[QN]|[E{I|L}]|[KN]}VNS{M(Oxidation (M))|F}[AG]V{I|L};[KA]QQS{M(Oxidation (M))|F}[AG]V{I|L} 5.3924;4.5285;4.5175;4.5017;4.3336;4.2016;3.6495;3.6176;3.4546;3.3226 -;-;-;-;-;-;-;-;-;- 467 1 1.179 73800.4 1.0 9859 5603 15458 HBL1_DMSO_200M_050219_1,15464 HBL1_DMSO_200M_050219_1,15464,RIADSFQVI False True RIADSFQVI 75.694361 524.793749988079 29457402.0 15458.0 nc|ENSG00000266412|Q13772-3|NCOA4;;ENSG00000266412|ENST00000581486|NCOA4;;nc|ENSG00000266412|Q13772-4|NCOA4 1.9026436805725095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15465 75.696 46.0 1758000.0 25 0 224130.0 41706 VPSITHGLSL 10 118 512.2952026555276 1022.5758523778552 2 512.2955810427666 MULTI CID FTMS 0 0 0 15458 481386.1875 0.0143842181982971 -4 0.2825241088867187 7 Unmodified _VPSITHGLSL_ ENST00000487137.6_1_14:23516516-23516573:-|nuORF 34.10243960390752 0.2198439752719791 3 {[TV]|[{I|L}S]}[HQ]D{I|L}V{I|L}V 9 6 + 49.089 0.0 0.0 4.8005 4.8005 82.562 0.0 0.0 0.0 13.352708163874423 12.08220305641312 12.08220305641312 8.762874945799766 0 0.7742275032520141 2.0 0.3252574989159953 0.2742275032520141 {[TV]|[{I|L}S]}[HQ]D{I|L}V{I|L}V;{[TV]|[{I|L}S]}[HQ]DV{I|L}{I|L}V;[{I|L}T][HN]D{I|L}V{I|L}V;[HD]{I|L}{[QS]|[NT]}{I|L}V{I|L}V;{[QS]|[NT]}[H{I|L}]D{I|L}V{I|L}V;[HD]{I|L}V[QT]V{I|L}V;[{I|L}T][HN]DV{I|L}{I|L}V;[{I|L}V][HD][QT]V{I|L}V;[HD]{I|L}{[QS]|[NT]}V{I|L}{I|L}V;[{I|L}V][Y{M(Oxidation (M))|F}][NG]V{I|L}V 4.8005;3.9436;2.9808;2.8447;2.4849;2.3781;2.1238;2.0337;1.9878;1.7156 -;-;-;-;-;-;-;-;-;- 486 1 1.179 66689.6 1.0 9860 5603 15458 HBL1_DMSO_200M_050219_1,15465 HBL1_DMSO_200M_050219_1,15465,VPSITHGLSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15466 75.699 161.0 775880.0 25 0 144180.0 + 10602 FVLKVPFWSV 10 115 611.3559007792654 1220.6972486253308 2 611.3561279177666 MULTI CID FTMS 0 0 0 15458 452835.9375 0.1185088016813933 -13 0.969207763671875 8 Unmodified _FVLKVPFWSV_ REV__ENST00000261263.4_1_12:72181570-72181666:+|nuORF 3.944395688203298 0.708391353636983 3 {I|L} 1 -1 9.3971 0.0 0.0 0.76982 0.0 0.0 1089.6019860294307 0.0 1089.6019860294307 0.0 8.55967490750193 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.76982 + + 32 + 1 1.179 96963.8 1.0 9861 5603 15458 HBL1_DMSO_200M_050219_1,15466 HBL1_DMSO_200M_050219_1,15466,FVLKVPFWSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15467 75.701 84.0 1237600.0 25 0 90488.0 + 32251 RWPDYVREL 9 112 411.88404851646834 1232.630316149605 3 411.8842346072197 MULTI CID FTMS 0 0 0 15458 456977.4375 0.1716882721539996 -13 0.969207763671875 9 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 45.739877483867886 0.0497104363764649 3 DYV{I|L}WV 6 6 42.969 0.0 0.0 3.486 0.0 0.0 439.2335728408716 0.0 439.2335728408716 0.0 24.183662915758216 0.0 0.0 0 1.2614393726401687 0.0 0.0 0.0 DYV{I|L}WV 3.486 - 698 + 1 1.179 85755.2 1.0 9862 5603 15458 HBL1_DMSO_200M_050219_1,15467 HBL1_DMSO_200M_050219_1,15467,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15468 75.708 411.0 233060.0 25 0 18801.0 -1 DLQDVCENFWM 11 150 736.7972339508727 1471.5799149685454 2 737.2999755740166 MULTI CID FTMS 0 0 0 15458 417520.6875 1.0 0 0.0 10 Carbamidomethyl (C),Oxidation (M) _DLQDVC(Carbamidomethyl (C))ENFWM(Oxidation (M))_ ENSG00000204501|ENST00000376152|PRAMEF15;ENSG00000204505|ENST00000415919|PRAMEF9;ENSG00000229571|ENST00000619661|PRAMEF25;ENSG00000232423|ENST00000376189|PRAMEF6;ENSG00000239810|ENST00000619922|PRAMEF11;ENSG00000243073|ENST00000235349|PRAMEF4;ENSG00000270601|ENST00000622421|PRAMEF5;ENSG00000274764|ENST00000436041|PRAMEF27;ENSG00000280267|ENST00000624207|PRAMEF26 4.5288652416199255 0.8537804541365391 3 QS{I|L} 3 -1 29.227 0.0 0.0 1.9861 0.0 0.0 1125.3942316415134 0.0 1125.3942316415134 0.0 18.74220950028501 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.3807196863200844 QS{I|L} 1.9861 - 775 + 1 1.179 73911.8 1.0 9863 5603 15458 HBL1_DMSO_200M_050219_1,15468 HBL1_DMSO_200M_050219_1,15468,DLQDVCENFWM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15469 75.716 443.0 458640.0 25 0 62994.0 31803 RSSVIHLQVR 10 199 597.8561389632442 1193.6977249932884 2 597.8564941287041 MULTI CID FTMS 0 0 0 15458 397566.65625 0.1504943549473869 11 -0.8227081298828125 11 Unmodified _RSSVIHLQVR_ ENSG00000197410|ENST00000357232|DCHS2 6.2057823575117 0.6979311171683138 3 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 2 10 10.969 0.0 0.0 0.91892 0.0 0.0 244.3178554637946 652.2349337213499 896.5527891851445 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 0.91892 - 278 + 1 1.179 153066.2 1.0 9864 5603 15458 HBL1_DMSO_200M_050219_1,15469 HBL1_DMSO_200M_050219_1,15469,RSSVIHLQVR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15470 75.72 197.0 801840.0 25 0 43296.0 + 45052 YPYEYLGGHI 10 179 606.2901121708721 1210.5656714085442 2 606.2900878787041 MULTI CID FTMS 0 0 0 15458 394090.09375 0.9805848464139196 -3 0.1844863891601562 12 Unmodified _YPYEYLGGHI_ ENSG00000158402|ENST00000323760|CDC25C;nc|ENSG00000158402|P30307-2|CDC25C;nc|ENSG00000158402|P30307-3|CDC25C;nc|ENSG00000158402|P30307-4|CDC25C 92.8221339359638 0.0091313492244435 3 YPYEY{I|L}NH{I|L} 9 2 + 102.03 0.0 0.0 8.4285 8.4285 82.428 0.0 0.0 0.0 68.27563435521589 11.252481779129525 11.252481779129525 0.4575749056067479 0 1.8441876774005248 2.0 0.7302046884880937 0.0 YPYEY{I|L}NH{I|L};YPYEY{I|L}GGH{I|L};YPYEY{I|L}[HQ]V;YPYEY{I|L}G[HA]V;Y{I|L}{M(Oxidation (M))|F}EY{I|L}NH{I|L};Y{I|L}{M(Oxidation (M))|F}EY{I|L}GGH{I|L};YPY{M(Oxidation (M))|F}{I|L}{[DS]|[MA]|[CV]|TT}GH{I|L};YPY[HQ]VEY{I|L};YPY{M(Oxidation (M))|F}{I|L}YKSM;Y{I|L}{M(Oxidation (M))|F}EY{I|L}[HQ]V 8.4285;8.3907;7.0785;7.0407;5.8224;5.7846;5.1956;4.5268;4.4914;4.4723 -;+;-;-;-;-;-;-;-;- + 3078 + 1 1.179 113122.9 1.0 9865 5603 15458 HBL1_DMSO_200M_050219_1,15470 HBL1_DMSO_200M_050219_1,15470,YPYEYLGGHI True True YPYEYLGGHI 75.71974 606.290087878704 22769529.0 15458.0 nc|ENSG00000158402|P30307-2|CDC25C;;nc|ENSG00000158402|P30307-3|CDC25C;;ENSG00000158402|ENST00000323760|CDC25C;;nc|ENSG00000158402|P30307-4|CDC25C 7.637170791625977 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15471 75.728 461.0 358350.0 25 0 16677.0 -1 0 167 706.6700163676439 2116.988219703132 3 706.6709472537041 MULTI CID FTMS 0 0 0 15458 333464.40625 1.0 0 0.0 13 3 K[HN]D{I|L}DTTE{M(Oxidation (M))|F} 10 -1 68.409 0.0 0.0 3.2314 0.0 0.0 898.4482549587941 0.0 898.4482549587941 0.0 25.95377257046596 0.0 0.0 0 2.5 0.0 1.1505149978319906 0.0 K[HN]D{I|L}DTTE{M(Oxidation (M))|F} 3.2314 - 4856 + 1 1.179 122707.4 1.0 9866 5603 15458 HBL1_DMSO_200M_050219_1,15471 HBL1_DMSO_200M_050219_1,15471, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15472 75.737 513.0 602400.0 25 0 48680.0 -1 NEEMSYSVEV 10 245 601.7477801800154 1201.4810074268307 2 601.7486450076103 MULTI CID FTMS 0 0 0 15458 279652.84375 1.0 0 0.0 14 Oxidation (M) _NEEM(Oxidation (M))SYSVEV_ ENSG00000054523|ENST00000676179|KIF1B;nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B 9.38312468134398 0.6832340498775793 3 {[QN]|[E{I|L}]|[KN]}{I|L}[{M(Oxidation (M))|F}V]VEGAQ 10 -1 18.839 0.0 0.0 1.568 0.0 0.0 0.0 112.93958659236355 112.93958659236355 5.046873514506952 0.0 0.0 0.0 0 0.0 0.721246399047171 0.3494850021680094 0.5356668758921829 {[QN]|[E{I|L}]|[KN]}{I|L}[{M(Oxidation (M))|F}V]VEGAQ 1.568 - 4379 1 1.179 217448.7 1.0 9867 5603 15458 HBL1_DMSO_200M_050219_1,15472 HBL1_DMSO_200M_050219_1,15472,NEEMSYSVEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15473 75.746 499.0 193890.0 25 0 31825.0 -1 VQYREYMGFIQ 11 146 725.3464026808865 1448.678252428573 2 725.3451415896416 MULTI CID FTMS 0 0 0 15458 243987.421875 1.0 0 0.0 15 Oxidation (M) _VQYREYM(Oxidation (M))GFIQ_ ENSG00000197976|ENST00000313871|AKAP17A;nc|ENSG00000292343|Q02040-2|AKAP17A;nc|ENSG00000292343|Q02040-3|AKAP17A 8.745405648335112 0.8338865417133445 3 {[QG]|[NA]}G{I|L}ED[DN]D{M(Oxidation (M))|F}K[{I|L}V] 13 -1 + 43.489 0.0 0.0 3.002 3.002 70.098 0.0 0.0 0.0 1.870866433571443 5.127974464358758 1.870866433571443 1.870866433571443 0 0.0 0.0 0.25 1.8026048219588933 {[QG]|[NA]}G{I|L}ED[DN]D{M(Oxidation (M))|F}K[{I|L}V];{[QN]|[E{I|L}]|[KN]}{I|L}ED[DN]D{M(Oxidation (M))|F}K[{I|L}V];{[QN]|[E{I|L}]|[KN]}{I|L}ED[DN]D{M(Oxidation (M))|F}Q[{I|L}V];{[QG]|[NA]}{I|L}GED[DN]D{M(Oxidation (M))|F}K[{I|L}V];[Q{I|L}]GGED[DN]D{M(Oxidation (M))|F}K[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}AGED[DN]D{M(Oxidation (M))|F}K[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}AGED[DN]D{M(Oxidation (M))|F}Q[{I|L}V];{[QN]|[E{I|L}]|[KN]}{I|L}ED[DN]D{M(Oxidation (M))|F}[AG][{I|L}V];[Q{I|L}]NED[DN]D{M(Oxidation (M))|F}K[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}QED[DN]D{M(Oxidation (M))|F}Q[{I|L}V] 3.002;2.8729;2.8729;2.7608;2.6076;2.3713;2.3713;2.2448;2.1491;1.9128 -;-;-;-;-;-;-;-;-;- 795 1 1.179 71715.5 1.0 9868 5603 15458 HBL1_DMSO_200M_050219_1,15473 HBL1_DMSO_200M_050219_1,15473,VQYREYMGFIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15474 75.756 554.0 190010.0 25 0 15339.0 + -1 YAPYPSPVL 9 103 1006.4776932252151 0 1006.476367175579 PEAK CID FTMS 0 0 0 15458 184846.3125 1.0 0 0.0 16 ENSG00000269404|ENST00000595883|SPIB;nc|ENSG00000269404|Q01892-2|SPIB;nc|ENSG00000269404|Q01892-3|SPIB 3 {I|L}CPY 4 -1 9.9312 0.0 0.0 0.49386 0.0 0.0 1023.4433903322864 508.2781336862591 1531.7215240185456 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}CPY 0.49386 - 546 + 1 1.179 74796.4 1.0 9869 5603 15458 HBL1_DMSO_200M_050219_1,15474 HBL1_DMSO_200M_050219_1,15474, False False YAPYPSPVL 75.755536 1006.47636717558 1352637.75 15458.0 ENSG00000269404|ENST00000595883|SPIB;;nc|ENSG00000269404|Q01892-2|SPIB;;nc|ENSG00000269404|Q01892-3|SPIB 7.304901599884033 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15475 75.761 206.0 539690.0 25 0 40389.0 + 173 AAMNPDAVLRV 11 152 578.810987914981 1155.6074228967618 2 578.8113891482353 MULTI CID FTMS 0 0 0 15458 160326.015625 0.7566028123637945 -1 0.0731353759765625 17 Unmodified _AAMNPDAVLRV_ ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-3|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1 35.61225514009592 0.279986979807413 3 AAMNPDAV{I|L}RV 11 0 + 65.659 0.0 0.0 5.6818 5.6818 77.888 0.0 0.0 0.0 15.783960731301676 1.876258047943665 1.876258047943665 1.876258047943665 0 0.6989700043360187 0.9208187539523752 0.0 0.3807196863200844 + + AAMNPDAV{I|L}RV;AAMNPDAVRV{I|L};AAMNPDAVR{I|L}V;AAMNPWV{I|L}RV;AAMNPWVRV{I|L};AAMGGPDAV{I|L}RV;AAMGGPDAVRV{I|L};AAMNPWVR{I|L}V;AAMGGPDAVR{I|L}V;AAMGGPWV{I|L}RV 5.6818;5.5194;5.1225;5.1127;4.9504;4.8918;4.7295;4.5535;4.3326;4.3197 +;-;-;-;-;-;-;-;-;- + 374 + 1 1.179 86476.6 1.0 9870 5603 15458 HBL1_DMSO_200M_050219_1,15475 HBL1_DMSO_200M_050219_1,15475,AAMNPDAVLRV False True AAMNPDAVLRV 75.760636 578.811389148235 2783807.25 15458.0 nc|ENSG00000162813|O95861-2|BPNT1;;ENSG00000162813|ENST00000322067|BPNT1;;nc|ENSG00000162813|O95861-3|BPNT1;;nc|ENSG00000162813|O95861-4|BPNT1 6.551269849141439 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15476 75.774 800.0 336680.0 25 0 31394.0 + 17828 KQLDDLKVEL 10 240 400.8994160702367 1199.67641881091 3 400.8990356326103 MULTI CID FTMS 0 0 0 15458 129954.421875 0.0006288035240202 59 -4.665985107421875 18 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 93.93812099017352 0.0090513810409226 3 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L} 10 4 + 88.963 0.0 0.0 7.4156 7.4156 91.272 0.0 0.0 0.0 11.047271864897525 16.53212513775344 11.047271864897525 9.164539485499247 0 1.1237125054200234 1.3010299956639813 1.5356668758921828 0.9674165578762486 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]D{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}KVE{I|L};[KQ]{I|L}DD{I|L}KVE{I|L};[AG]K{I|L}DD{I|L}KVE{I|L};{[VA]|[{I|L}G]}AKDD{I|L}KVE{I|L};[{I|L}V][SG]QD{I|L}KVE{I|L};[Q{I|L}]KDD{I|L}KVE{I|L};[K{I|L}]QDD{I|L}KVE{I|L};[AG]{I|L}KDD{I|L}KVE{I|L} 7.4156;6.6517;6.6049;6.4948;6.4324;6.4248;6.279;6.2274;6.0758;6.0561 -;-;-;+;-;-;-;-;-;- + 8770 1 1.179 207820.6 0.8799999952316284 9871 5603 15458 HBL1_DMSO_200M_050219_1,15476 HBL1_DMSO_200M_050219_1,15476,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15477 75.787 709.0 222820.0 25 0 18714.0 + 32094 RVLPSIVNEV 10 201 563.3352749241639 1124.6559969151276 2 563.3356811404228 MULTI CID FTMS 0 0 0 15458 101306.8515625 0.0674233375539396 6 -0.4131317138671875 19 Unmodified _RVLPSIVNEV_ ENSG00000215021|ENST00000535923|PHB2;ENST00000543465.5_1_12:7077022-7079730:-|nuORF;ENST00000544888.5_1_12:7077022-7079603:-|nuORF;nc|ENSG00000215021|Q99623-2|PHB2 21.59015148037692 0.4836074274810599 3 [{M(Oxidation (M))|F}V]NV{I|L}A 6 8 29.752 0.0 0.0 2.6454 0.0 0.0 0.0 478.2738131158813 478.2738131158813 10.13097571916498 0.0 0.0 0.0 0 0.1421590589602531 0.7695510786217261 0.0 0.0 [{M(Oxidation (M))|F}V]NV{I|L}A 2.6454 - 320 + 1 1.179 120766.8 1.0 9872 5603 15458 HBL1_DMSO_200M_050219_1,15477 HBL1_DMSO_200M_050219_1,15477,RVLPSIVNEV False True RVLPSIVNEV 75.786761 563.335681140423 18753426.0 15458.0 ENST00000544888.5_1_12:7077022-7079603:-|nuORF;;ENSG00000215021|ENST00000535923|PHB2;;nc|ENSG00000215021|Q99623-2|PHB2;;ENST00000543465.5_1_12:7077022-7079730:-|nuORF 5.596649010976155 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15478 75.802 800.0 281440.0 25 0 17852.0 + 18504 KYPHYFPVM 9 247 394.5315382182915 1180.5727852550745 3 394.5311462283134 MULTI CID FTMS 0 0 0 15458 95287.25 0.473375140070786 2 -0.1609954833984375 20 Unmodified _KYPHYFPVM_ ENSG00000123213|ENST00000380985|NLN;ENST00000506539.5_1_5:65018131-65088776:+|nuORF;ENST00000506677.1_1_5:65076017-65081739:+|nuORF 15.248480904072842 0.4239247793462406 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YKY{M(Oxidation (M))|F}PVM 9 3 + 38.949 0.0 0.0 3.2991 3.2991 74.929 0.0 0.0 0.0 4.771212547196626 9.577570906191898 4.771212547196626 4.771212547196626 0 0.3935078169319297 0.0 0.0 0.6139829889124311 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YKY{M(Oxidation (M))|F}PVM;[PG]{[QD]|[EN]|[WG]|[KD]|[RS]}KY{M(Oxidation (M))|F}PVM;[C(Carbamidomethyl (C))R]{NN|[MP]|[D{I|L}]|[EV]}YKPVM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YKY{I|L}MVM;{[WN]|[YH]}PKY{M(Oxidation (M))|F}PVM;[PG]{[QD]|[EN]|[WG]|[KD]|[RS]}KY{I|L}MVM;{[WN]|[YH]}PKY{I|L}MVM;[{M(Oxidation (M))|F}T]P{M(Oxidation (M))|F}YK{[YC]|[HE]}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{M(Oxidation (M))|F}YKPVM;{I|L}{I|L}[KC]{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}PVM 3.2991;2.895;2.8312;2.7996;2.7458;2.3955;2.2463;2.2246;2.2154;1.825 -;-;-;-;-;-;-;-;-;- 1356 1 1.179 176667.7 0.7799999713897705 9873 5603 15458 HBL1_DMSO_200M_050219_1,15478 HBL1_DMSO_200M_050219_1,15478,KYPHYFPVM False True KYPHYFPVM 75.80175 394.531146228313 1698346.375 15458.0 ENSG00000123213|ENST00000380985|NLN;;ENST00000506677.1_1_5:65076017-65081739:+|nuORF;;ENST00000506539.5_1_5:65018131-65088776:+|nuORF 5.608200073242188 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15480 75.806 17.0 2561300.0 25 0 416680.0 + 39581 VCTPRLLL 8 61 457.7781512369343 913.5417495406684 2 457.7785217165947 MULTI CID FTMS 0 0 0 15479 3345736.75 0.3524236138607969 3 -0.1705169677734375 1 Unmodified _VCTPRLLL_ REV__ENST00000489327.1_1_2:69705990-69736406:-|nuORF 25.399314129420983 0.5099049743284904 3 {M(Oxidation (M))|F}{I|L}{I|L} 3 -1 31.242 0.0 0.0 3.4199 0.0 0.0 522.2808094709 0.0 522.2808094709 0.0 24.252509456924827 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}{I|L} 3.4199 - 26 1 1.191 41691.4 1.0 9874 5604 15479 HBL1_DMSO_200M_050219_1,15480 HBL1_DMSO_200M_050219_1,15480,VCTPRLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15481 75.807 16.0 2304100.0 25 0 141010.0 + 45836 YYPPSQIAQL 10 72 590.3063448428628 1178.5981367525255 2 590.3061401247978 MULTI CID FTMS 0 0 0 15479 2436161.5 0.6394547618372659 1 -0.0432815551757812 2 Unmodified _YYPPSQIAQL_ ENSG00000070756|ENST00000318607|PABPC1;nc|ENSG00000070756|P11940-2|PABPC1 43.77239144664712 0.1177314611616471 3 YYP 3 7 32.319 0.0 0.0 2.7422 0.0 0.0 0.0 752.4005831354124 752.4005831354124 13.39149333932717 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YYP 2.7422 + + 50 + 1 1.191 34234.5 1.0 9875 5604 15479 HBL1_DMSO_200M_050219_1,15481 HBL1_DMSO_200M_050219_1,15481,YYPPSQIAQL True True YYPPSQIAQL 75.807229 590.306140124798 100367152.0 15479.0 nc|ENSG00000070756|P11940-2|PABPC1;;ENSG00000070756|ENST00000318607|PABPC1 6.550337950388591 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15482 75.808 6.9 6261300.0 25 0 793340.0 + 16372 IYQEKVLDL 9 81 560.8168714373286 1119.619189941457 2 560.8168212771416 MULTI CID FTMS 0 0 0 15479 6770911.0 0.4682519484474868 -3 0.2648162841796875 3 Unmodified _IYQEKVLDL_ ENSG00000079616|ENST00000160827|KIF22;nc|ENSG00000079616|Q14807-2|KIF22 51.629811660486645 0.0367964933207742 3 {I|L}YQE 4 5 60.394 0.0 0.0 5.3941 0.0 0.0 0.0 583.3460787408811 583.3460787408811 21.348111898214697 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3807196863200844 0.5 + {I|L}YQE 5.3941 + + 269 + 1 1.191 38211.5 1.0 9876 5604 15479 HBL1_DMSO_200M_050219_1,15482 HBL1_DMSO_200M_050219_1,15482,IYQEKVLDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15483 75.81 15.0 2951700.0 25 0 306980.0 15522 IPVLANFIV 9 74 493.30750595992856 984.6004589866571 2 493.3084289431572 MULTI CID FTMS 0 0 0 15479 2847699.75 0.1938295104689862 -12 0.9225616455078124 4 Unmodified _IPVLANFIV_ ENSG00000146085|ENST00000274813|MMUT 21.74664581756881 0.2544899275067181 3 {I|L}P 2 7 45.217 0.0 0.0 4.5924 0.0 0.0 0.0 771.4409281772093 771.4409281772093 17.8722497583518 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.5924 + + 197 + 1 1.191 37056.2 1.0 9877 5604 15479 HBL1_DMSO_200M_050219_1,15483 HBL1_DMSO_200M_050219_1,15483,IPVLANFIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15484 75.811 18.0 2323100.0 25 0 344940.0 33619 SIQQRKAI 8 66 472.287993149045 942.56143336489 2 472.2881957888603 MULTI CID FTMS 0 0 0 15479 1656309.5 0.1094851050080604 7 -0.450653076171875 5 Unmodified _SIQQRKAI_ ENSG00000171659|ENST00000378142|GPR34 9.347437153973935 0.7675937258251505 3 {I|L} 1 7 13.979 0.0 0.0 1.4831 0.0 0.0 811.4665980150838 0.0 811.4665980150838 0.0 3.701813447471221 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4831 + + 24 + 1 1.191 39641.2 1.0 9878 5604 15479 HBL1_DMSO_200M_050219_1,15484 HBL1_DMSO_200M_050219_1,15484,SIQQRKAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15485 75.812 29.0 1448300.0 25 0 165020.0 + 33544 SILHDVVEV 9 64 505.7798149570788 1009.5450769809576 2 505.7802307009697 MULTI CID FTMS 0 0 0 15479 1576972.875 0.4419360452615311 2 -0.0984725952148437 6 Unmodified _SILHDVVEV_ ENSG00000091640|ENST00000206020|SPAG7;ENST00000572148.1_1_17:4863453-4863890:-|nuORF 39.957323273325 0.0756908302845263 3 {NN|[MP]|[D{I|L}]|[EV]}HVTVVEV 9 4 + 72.841 0.0 0.0 7.2152 7.2152 86.799 0.0 0.0 0.0 13.253800256993957 16.478174818886373 13.253800256993957 4.771212547196626 0 0.0 1.3979400086720375 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}HVTVVEV;{NN|[MP]|[D{I|L}]|[EV]}HVVTVEV;{[TV]|[{I|L}S]}[H{I|L}]DVVEV;[HD]{I|L}VTVVEV;[HD]{I|L}VVTVEV;[HD]V{I|L}TVVEV;[HD]V{I|L}VTVEV;[HD]VV{I|L}TVEV 7.2152;6.7426;5.9024;5.5323;5.0597;5.0597;4.5871;4.1929 -;-;+;-;-;-;-;- + 287 1 1.191 37918.6 1.0 9879 5604 15479 HBL1_DMSO_200M_050219_1,15485 HBL1_DMSO_200M_050219_1,15485,SILHDVVEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15486 75.813 33.0 1125000.0 25 0 246150.0 + 17420 KMYEEFLSKV 10 61 637.3283771053601 1272.64220127752 2 637.3288452029228 MULTI CID FTMS 0 0 0 15479 1379102.625 0.3181806095462307 -3 0.2648162841796875 7 Unmodified _KMYEEFLSKV_ ENSG00000108946|ENST00000589228|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;nc|ENSG00000108946|P10644-2|PRKAR1A 15.46650911470482 0.5880290105345272 3 KMY 3 7 31.198 0.0 0.0 2.4514 0.0 0.0 0.0 847.4221895807249 847.4221895807249 11.73393743112328 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + KMY 2.4514 + + 32 + 1 1.191 36348.3 1.0 9880 5604 15479 HBL1_DMSO_200M_050219_1,15486 HBL1_DMSO_200M_050219_1,15486,KMYEEFLSKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15487 75.814 30.0 1896300.0 25 0 230200.0 + + 22868 VMAPRTLLL 9 79 515.3099574780823 1028.6053620229643 2 515.3102905154228 MULTI CID FTMS 0 0 0 15479 1375528.25 0.3872206440243658 -3 0.2648162841796875 8 Unmodified _LSAPYPRLL_ ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 32.30548876998284 0.1201446275138228 3 YV{I|L}{I|L} 4 -1 31.714 0.0 0.0 3.0833 0.0 0.0 522.2792225568375 0.0 522.2792225568375 0.0 6.608958956536384 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 YV{I|L}{I|L} 3.0833 - 104 1 1.191 51513.4 1.0 9881 5604 15479 HBL1_DMSO_200M_050219_1,15487 HBL1_DMSO_200M_050219_1,15487,LSAPYPRLL False False VMAPRTLLL 75.814302 515.310290515423 26562210.0 15479.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 2.981512268384298 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15488 75.816 69.0 620260.0 25 0 144020.0 + 45621 YVLFKRFHR 9 54 633.3694136787589 1264.7242744243176 2 633.3696777224541 MULTI CID FTMS 0 0 0 15479 1195803.875 0.7818926048682759 1 -0.0432815551757812 9 Unmodified _YVLFKRFHR_ REV__ENST00000429312.1_1_7:48942986-48943091:-|nuORF 0.6014990680409731 0.8936861360942873 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.191 41520.3 1.0 9882 5604 15479 HBL1_DMSO_200M_050219_1,15488 HBL1_DMSO_200M_050219_1,15488,YVLFKRFHR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15489 75.818 106.0 721890.0 25 0 100130.0 + 3732 DAFRVNVI 8 107 467.261603560774 932.508654188348 2 467.2617675662041 MULTI CID FTMS 0 0 0 15479 1012913.3125 0.0338702448108718 7 -0.450653076171875 10 Unmodified _DAFRVNVI_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 34.40172386719151 0.3279500639400574 3 RADV{I|L} 5 5 38.232 0.0 0.0 4.0999 0.0 0.0 360.17061049629064 0.0 360.17061049629064 0.0 9.363044005075736 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 RADV{I|L} 4.0999 - 333 1 1.191 61861.6 1.0 9883 5604 15479 HBL1_DMSO_200M_050219_1,15489 HBL1_DMSO_200M_050219_1,15489,DAFRVNVI False True DAFRVNVI 75.818214 467.261767566204 719803584.0 15479.0 ENST00000487958.5_1_3:183894781-183898060:+|nuORF;;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;;ENSG00000161203|ENST00000292807|AP2M1;;nc|ENSG00000161203|Q96CW1-2|AP2M1;;ENST00000466598.5_1_3:183894781-183896942:+|nuORF 4.541484832763672 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15490 75.82 55.0 1448400.0 25 0 266290.0 + 19514 LFLSKLIVGS 10 99 359.56202308733515 1075.6642398622057 3 359.5617553591728 MULTI CID FTMS 0 0 0 15479 945575.4375 1.0 0 0.0 11 Unmodified _LFLSKLIVGS_ REV__ENST00000469942.1_1_4:100849716-100849878:-|nuORF 32.78568957990786 0.2337485590374503 3 {I|L}{I|L}KKDS{I|L}{M(Oxidation (M))|F}{I|L} 9 -1 + 21.391 0.0 0.0 1.9886 1.9886 66.426 0.0 0.0 0.0 0.5358282807263173 4.167503232860426 0.5358282807263173 0.5358282807263173 0 0.218765315847925 1.6989700043360187 0.3807196863200844 0.0 {I|L}{I|L}KKDS{I|L}{M(Oxidation (M))|F}{I|L};[K{I|L}]DKS{I|L}{I|L}{M(Oxidation (M))|F}{I|L};[K{I|L}]DK{I|L}S{I|L}{M(Oxidation (M))|F}{I|L};{I|L}{I|L}KK[YG]{I|L}{[QN]|[E{I|L}]|[KN]};[K{I|L}][K{I|L}]DS{I|L}{M(Oxidation (M))|F}{I|L} 1.9886;1.9388;1.4952;0.9701;0.65386 -;-;-;-;- 119 1 1.191 69013.5 1.0 9884 5604 15479 HBL1_DMSO_200M_050219_1,15490 HBL1_DMSO_200M_050219_1,15490,LFLSKLIVGS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15491 75.821 67.0 1185600.0 25 0 93028.0 + 5460 DLREQILRV 9 107 381.2278436974621 1140.6617016925863 3 381.2278015017509 MULTI CID FTMS 0 0 0 15479 879912.875 0.7578143890044025 -2 0.1908493041992187 12 Unmodified _DLREQILRV_ ENSG00000116473|ENST00000369709|RAP1A;ENSG00000127314|ENST00000250559|RAP1B;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;nc|ENSG00000254893|A6NIZ1|RAP1BL 65.47368725323818 0.0230515101691092 3 D{I|L}REQ{I|L}V{I|L}R 9 2 + 94.837 0.0 0.0 8.3142 8.3142 82.348 0.0 0.0 0.0 76.87829734333008 3.979400086720375 3.979400086720375 0.4845500650402812 0 1.4489700043360187 2.0 0.0 0.805462187404089 D{I|L}REQ{I|L}V{I|L}R;D{I|L}VWQ{I|L}V{I|L}R;D{I|L}REQ{I|L}{I|L}VR;D{I|L}VWQ{I|L}{I|L}VR;D{I|L}REQV{I|L}{I|L}R;D{I|L}VWQV{I|L}{I|L}R;D{I|L}RE[AG]{I|L}V{I|L}R;D{I|L}VW[AG]{I|L}V{I|L}R;D{I|L}RE[AG]{I|L}{I|L}VR;D{I|L}VW[AG]{I|L}{I|L}VR 8.3142;8.2717;8.2521;8.2096;7.5733;7.5309;7.507;7.4645;7.4449;7.4024 -;-;-;-;-;-;-;-;-;- 651 + 1 1.191 68561.5 1.0 9885 5604 15479 HBL1_DMSO_200M_050219_1,15491 HBL1_DMSO_200M_050219_1,15491,DLREQILRV True True DLREQILRV 75.821212 381.227801501751 9624341.0 15479.0 nc|ENSG00000254893|A6NIZ1|RAP1BL;;nc|ENSG00000127314|P61224-3|RAP1B;;nc|ENSG00000127314|P61224-4|RAP1B;;ENSG00000127314|ENST00000250559|RAP1B;;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;;ENSG00000116473|ENST00000369709|RAP1A 3.978737990061442 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15492 75.824 115.0 822660.0 25 0 107240.0 + 18256 KVIEAIRVEL 10 82 585.3664848038255 1168.718416674451 2 585.3660766482353 MULTI CID FTMS 0 0 0 15479 751511.3125 0.2188451563510806 2 -0.0984725952148437 13 Unmodified _KVIEAIRVEL_ ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1 35.995811192298525 0.199850397622382 3 KV{I|L}EA{I|L} 6 4 71.916 0.0 0.0 6.1534 0.0 0.0 0.0 512.2839449518186 512.2839449518186 45.71842196392844 0.0 0.0 0.0 0 1.305462187404089 1.0457574905606752 0.4247425010840047 0.0 + KV{I|L}EA{I|L} 6.1534 + + 124 + 1 1.191 76404.0 1.0 9886 5604 15479 HBL1_DMSO_200M_050219_1,15492 HBL1_DMSO_200M_050219_1,15492,KVIEAIRVEL False True KVIEAIRVEL 75.823618 585.366076648235 69177594.0 15479.0 ENSG00000198901|ENST00000394249|PRC1;;nc|ENSG00000198901|O43663-2|PRC1;;nc|ENSG00000198901|O43663-3|PRC1;;nc|ENSG00000198901|O43663-4|PRC1 5.887888908386231 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15493 75.825 45.0 915900.0 25 0 66053.0 + 39874 VFLEAAKAL 9 83 481.2887338040571 960.5629146749142 2 481.2883788943291 MULTI CID FTMS 0 0 0 15479 777161.4375 1.0 0 0.0 14 Unmodified _VFLEAAKAL_ ENSG00000082212|ENST00000321341|ME2;ENST00000426028.2_1_9:29824858-29825224:-|nuORF 24.020572477871973 0.2255576514309169 3 [{M(Oxidation (M))|F}V]{I|L}EAA[KA]{I|L} 9 0 + 36.66 0.0 0.0 3.8165 3.8165 83.432 0.0 0.0 0.0 13.991210102739592 2.006594505464186 2.006594505464186 18.014932106861043 0 0.4247425010840047 0.0 0.5 0.0 + + [{M(Oxidation (M))|F}V]{I|L}EAA[KA]{I|L};[{M(Oxidation (M))|F}V]{I|L}{I|L}E{I|L}{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]{I|L}[RD][KA]{I|L} 3.8165;1.9411;1.5035 +;-;- + 142 + 1 1.191 34946.2 1.0 9887 5604 15479 HBL1_DMSO_200M_050219_1,15493 HBL1_DMSO_200M_050219_1,15493,VFLEAAKAL False True VFLEAAKAL 75.82485 481.288378894329 10636523.0 15479.0 ENST00000426028.2_1_9:29824858-29825224:-|nuORF;;ENSG00000082212|ENST00000321341|ME2 3.3828183809916177 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15494 75.827 123.0 631420.0 25 0 76801.0 + 21726 LPLTRIPP 8 78 453.7921119878436 905.5696710424872 2 453.7921935915947 MULTI CID FTMS 0 0 0 15479 640552.75 0.0100011258732192 36 -2.6494216918945312 15 Unmodified _LPLTRIPP_ REV__ENST00000274853.7_1_6:30653942-30654101:-|nuORF 21.74664581756881 0.5868176546531598 3 {I|L}PPP 4 -1 53.175 0.0 0.0 5.872 0.0 0.0 0.0 498.3039339654906 498.3039339654906 41.75534203253535 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPP 5.872 - 28 + 1 1.191 65098.6 1.0 9888 5604 15479 HBL1_DMSO_200M_050219_1,15494 HBL1_DMSO_200M_050219_1,15494,LPLTRIPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15495 75.83 140.0 305410.0 25 0 14190.0 28206 PQGRSPVRPGL 11 83 582.3353301673142 1162.6561074014282 2 582.3352538943291 MULTI CID FTMS 0 0 0 15479 619268.125 0.1180643175748535 14 -1.012481689453125 16 Unmodified _PQGRSPVRPGL_ ENST00000445908.1_1_3:197178144-197183449:-|nuORF 5.296884461304476 0.8501568894076437 3 QPA 3 9 16.198 0.0 0.0 1.3932 0.0 0.0 581.3468101924142 282.14670740299067 863.4935175954049 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QPA 1.3932 - 131 + 1 1.191 40370.3 1.0 9889 5604 15479 HBL1_DMSO_200M_050219_1,15495 HBL1_DMSO_200M_050219_1,15495,PQGRSPVRPGL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15496 75.831 47.0 746550.0 25 0 57473.0 -1 NMYFIGNML 9 76 567.751244185203 1133.4879354372058 2 567.7517578005791 MULTI CID FTMS 0 0 0 15479 522539.90625 0.277424816316324 -3 0.2648162841796875 17 2 Oxidation (M) _NM(Oxidation (M))YFIGNM(Oxidation (M))L_ nc|ENSG00000174233|O43306-2|ADCY6 10.823927491677226 0.5436922275383211 3 A{I|L} 2 -1 22.959 0.0 0.0 2.0255 0.0 0.0 931.3551819965792 0.0 931.3551819965792 0.0 13.89075625191822 0.0 0.0 0 0.5 0.0 0.0 0.0 A{I|L} 2.0255 - 27 + 1 1.191 30590.4 1.0 9890 5604 15479 HBL1_DMSO_200M_050219_1,15496 HBL1_DMSO_200M_050219_1,15496,NMYFIGNML False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15497 75.836 214.0 957300.0 25 0 122870.0 + 4393 DAVQLNVI 8 164 436.2477972342146 870.4810415352292 2 436.2475158572197 MULTI CID FTMS 0 0 0 15479 502612.15625 0.2143276926557228 -4 0.3022003173828125 18 Unmodified _DAVQLNVI_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 36.04419817259434 0.3004715606373109 3 {[DA]|[EG]}VQ{I|L} 5 3 43.06 0.0 0.0 4.9467 0.0 0.0 0.0 341.1819646046337 341.1819646046337 16.558327325216524 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.2614393726401688 + {[DA]|[EG]}VQ{I|L} 4.9467 + + 709 1 1.191 160839.6 1.0 9891 5604 15479 HBL1_DMSO_200M_050219_1,15497 HBL1_DMSO_200M_050219_1,15497,DAVQLNVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15498 75.843 392.0 386650.0 25 0 19623.0 39870 VFKIQLHSHV 10 162 604.3483545669761 1206.6821562007522 2 604.3492309451103 MULTI CID FTMS 0 0 0 15479 414094.15625 0.1020027670580851 -8 0.6004791259765625 19 Unmodified _VFKIQLHSHV_ ENST00000422906.6_1_8:74722847-74742637:-|nuORF 4.3292370932331545 0.7066112369704343 3 VVEDH{I|L}{I|L}HV 9 6 35.509 0.0 0.0 2.9427 0.0 0.0 147.11350493297715 0.0 147.11350493297715 0.0 10.850718816155378 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 VVEDH{I|L}{I|L}HV 2.9427 - 1681 + 1 1.191 111423.7 1.0 9892 5604 15479 HBL1_DMSO_200M_050219_1,15498 HBL1_DMSO_200M_050219_1,15498,VFKIQLHSHV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15499 75.845 119.0 658390.0 25 0 72585.0 + 10505 FVADGIFKA 9 99 484.2652653280969 966.515977722994 2 484.2673217654228 MULTI CID FTMS 0 0 0 15479 387301.25 0.8502387858725916 -2 0.1908493041992187 20 Unmodified _FVADGIFKA_ ENSG00000149273|ENST00000531188|RPS3;ENST00000529173.5_1_11:75110591-75112804:+|nuORF;nc|ENSG00000149273|P23396-2|RPS3 34.40172386719151 0.1061884637610825 3 {M(Oxidation (M))|F}VADAV{M(Oxidation (M))|F}[KA] 9 2 + 60.261 0.0 0.0 6.2349 6.2349 85.561 0.0 0.0 0.0 40.59990994888034 7.024597658517052 7.024597658517052 6.478174818886373 0 0.9291746928241128 1.5228787452803376 0.0 0.2887254899964357 {M(Oxidation (M))|F}VADAV{M(Oxidation (M))|F}[KA];{M(Oxidation (M))|F}VAWV{M(Oxidation (M))|F}[KA];{M(Oxidation (M))|F}VWAV{M(Oxidation (M))|F}[KA];[{I|L}P][PG]VADAVE;{M(Oxidation (M))|F}V[HV]R[NP]V;{M(Oxidation (M))|F}V[TP]{[SA]|[TG]}{M(Oxidation (M))|F}[KA];{[TV]|[{I|L}S]}QR[HV]VE;[{I|L}P][PG]VWAVE;[{I|L}P][PG]VAWVE;{NN|[MP]|[D{I|L}]|[EV]}QK[HV]VE 6.2349;5.5646;5.2809;3.5945;3.4123;3.3157;3.1259;2.9187;2.6349;2.538 -;-;-;-;-;-;-;-;-;- 456 + 1 1.191 65920.8 1.0 9893 5604 15479 HBL1_DMSO_200M_050219_1,15499 HBL1_DMSO_200M_050219_1,15499,FVADGIFKA True True FVADGIFKA 75.845037 484.267321765423 7084110.5 15479.0 nc|ENSG00000149273|P23396-2|RPS3;;ENSG00000149273|ENST00000531188|RPS3;;ENST00000529173.5_1_11:75110591-75112804:+|nuORF 4.9835764567057295 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15501 75.849 30.0 1344100.0 25 0 96667.0 + 29932 QSLEYLEQV 9 84 554.7799020355588 1107.5452511379176 2 554.7800781130791 MULTI CID FTMS 0 0 0 15500 1479941.0 0.6607575619574205 1 -0.0551910400390625 1 Unmodified _QSLEYLEQV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 49.93300154707207 0.0405168250806675 3 {[TV]|[{I|L}S]}QEY 5 6 34.358 0.0 0.0 3.1022 0.0 0.0 0.0 484.2413643050528 484.2413643050528 11.68218945128244 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.5629529932484498 0.7302046884880937 {[TV]|[{I|L}S]}QEY 3.1022 - 326 1 1.191 35408.8 1.0 9894 5605 15500 HBL1_DMSO_200M_050219_1,15501 HBL1_DMSO_200M_050219_1,15501,QSLEYLEQV True True QSLEYLEQV 75.849331 554.780078113079 21768558.0 15500.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 5.592921415964763 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15502 75.851 20.0 1897000.0 25 0 75781.0 + 2224 AQDEHLITF 9 85 537.2668823739018 1072.5192118146035 2 537.2665893435478 MULTI CID FTMS 0 0 0 15500 732109.0 0.401259559154296 2 -0.1272354125976562 2 Unmodified _AQDEHLITF_ ENSG00000144028|ENST00000323853|SNRNP200 19.256988751693697 0.3154191944385105 3 [{I|L}P]{M(Oxidation (M))|F}{I|L}{I|L} 5 7 18.697 0.0 0.0 1.7432 0.0 0.0 0.0 486.1579974808466 486.1579974808466 4.09256854528806 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 [{I|L}P]{M(Oxidation (M))|F}{I|L}{I|L} 1.7432 - 91 1 1.191 36479.4 1.0 9895 5605 15500 HBL1_DMSO_200M_050219_1,15502 HBL1_DMSO_200M_050219_1,15502,AQDEHLITF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15503 75.852 46.0 1670100.0 25 0 146150.0 + 9340 FILKKLDSI 9 94 538.8393510009887 1075.6641490687773 2 538.8393432497978 MULTI CID FTMS 0 0 0 15500 811914.4375 0.6837605339536672 -1 0.0432815551757812 3 Unmodified _FILKKLDSI_ ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF;nc|ENSG00000175768|Q8N4H5-3|TOMM5 38.17557092003332 0.0854718145212029 3 {I|L}[WR]K{I|L}{I|L}E 7 6 38.984 0.0 0.0 3.6242 0.0 0.0 119.07396132636876 0.0 119.07396132636876 0.0 16.410969401569417 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}[WR]K{I|L}{I|L}E 3.6242 - 219 1 1.191 62657.1 1.0 9896 5605 15500 HBL1_DMSO_200M_050219_1,15503 HBL1_DMSO_200M_050219_1,15503,FILKKLDSI True True FILKKLDSI 75.851781 538.839343249798 9169819.0 15500.0 nc|ENSG00000175768|Q8N4H5-3|TOMM5;;ENST00000354833.7_1_5:70213930-70214023:+|nuORF;;ENSG00000175768|ENST00000321301|TOMM5 1.113400161266327 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15504 75.853 43.0 1026700.0 25 0 107490.0 3517 CSFTVTCLEV 10 99 551.2517259025342 1100.4888988718683 2 551.2515746951103 MULTI CID FTMS 0 0 0 15500 751676.875 0.6609264663712981 1 -0.0551910400390625 4 Unmodified _CSFTVTCLEV_ nc|ENSG00000124275|Q9UBK8-1|MTRR 14.838274106304384 0.5985701837916485 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ES]|[DT]|[{I|L}C]}{I|L}V 6 5 34.91 0.0 0.0 3.1723 0.0 0.0 0.0 435.1380437295433 435.1380437295433 15.702110621359246 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.0283773187068794 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ES]|[DT]|[{I|L}C]}{I|L}V 3.1723 - 448 1 1.191 41146.4 1.0 9897 5605 15500 HBL1_DMSO_200M_050219_1,15504 HBL1_DMSO_200M_050219_1,15504,CSFTVTCLEV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15505 75.855 63.0 973360.0 25 0 86295.0 + 19519 LFLVMKPI 8 85 480.8013543239512 959.5881557147025 2 480.8013488650322 MULTI CID FTMS 0 0 0 15500 390866.5 0.029168358163512 8 -0.619354248046875 5 Unmodified _LFLVMKPI_ REV__ENST00000442760.2_1_13:45914392-45914515:-|nuORF 6.354104778181461 0.7857632046190106 3 AAE{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 6 -1 25.891 0.0 0.0 2.6981 0.0 0.0 330.226854392775 0.0 330.226854392775 0.0 14.458865705675874 0.0 0.0 0 0.0 0.0 0.5 0.0 AAE{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 2.6981 - 196 1 1.191 53987.8 1.0 9898 5605 15500 HBL1_DMSO_200M_050219_1,15505 HBL1_DMSO_200M_050219_1,15505,LFLVMKPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15506 75.865 594.0 467170.0 25 0 65226.0 + 17422 KMYEEFLSKV 10 190 425.22134587561374 1272.6422082270412 3 425.5556823611259 MULTI CID FTMS 0 0 0 15500 365075.75 0.8789044261862183 -2 0.1609954833984375 6 Unmodified _KMYEEFLSKV_ ENSG00000108946|ENST00000589228|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;nc|ENSG00000108946|P10644-2|PRKAR1A 57.2037768669896 0.0439211711061507 3 [YE]MKE{M(Oxidation (M))|F}{I|L}SKV 10 4 [YE]MKE + + 44.597 28.188 4.1435 3.5043 3.5043 51.252 0.0 0.0 0.0 0.0 8.221740651475642 0.0 0.0 0 1.0 0.0 0.8851518780601924 0.2302046884880938 [YE]MKE{M(Oxidation (M))|F}{I|L}SKV 3.5043 - 1336 + 1 1.191 232229.4 1.0 9899 5605 15500 HBL1_DMSO_200M_050219_1,15506 HBL1_DMSO_200M_050219_1,15506,KMYEEFLSKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15507 75.867 105.0 1480700.0 25 0 237140.0 + 9660 FLPRKFPSL 9 131 368.8906659814351 1103.6501685445053 3 368.8906127810478 MULTI CID FTMS 0 0 0 15500 328697.03125 0.2189118038700353 -3 0.234130859375 7 Unmodified _FLPRKFPSL_ ENSG00000261236|ENST00000569669|BOP1;nc|ENSG00000261236|Q14137-2|BOP1 38.61474834105838 0.0830609365873449 3 [RP]K{M(Oxidation (M))|F}PS{I|L}{I|L}{M(Oxidation (M))|F} 9 4 + 41.806 0.0 0.0 3.7879 3.7879 73.262 0.0 0.0 0.0 5.118004708010687 11.800442355934903 5.118004708010687 2.9659780392387347 0 0.0 0.0 0.3807196863200844 0.2134679910804404 [RP]K{M(Oxidation (M))|F}PS{I|L}{I|L}{M(Oxidation (M))|F};[RP]K{M(Oxidation (M))|F}SP{I|L}{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]PS{I|L}{I|L}{M(Oxidation (M))|F};[RP]K{M(Oxidation (M))|F}P{I|L}S{I|L}{M(Oxidation (M))|F};[RP]K{M(Oxidation (M))|F}{I|L}PS{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]SP{I|L}{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KK{[ET]|[MV]}{I|L}{I|L}E;{[DS]|[MA]|[CV]|TT}{I|L}[Q{I|L}]R{I|L}{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]{I|L}PS{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]P{I|L}S{I|L}{M(Oxidation (M))|F} 3.7879;3.5192;2.9114;2.8096;2.649;2.6427;2.5329;2.5126;2.0093;1.9331 -;-;-;-;-;-;-;-;-;- 460 1 1.191 131599.6 1.0 9900 5605 15500 HBL1_DMSO_200M_050219_1,15507 HBL1_DMSO_200M_050219_1,15507,FLPRKFPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15508 75.87 165.0 717650.0 25 0 127430.0 -1 0 122 323.20954951581393 644.4045460984279 2 323.2094909548759 MULTI CID FTMS 0 0 0 15500 314540.40625 0.2913851906868767 -2 0.1609954833984375 8 3 {I|L}M{I|L}[R{I|L}] 5 -1 + 53.5 0.0 0.0 8.3022 8.3022 96.802 0.0 0.0 0.0 45.26925019195368 8.762874945799766 8.762874945799766 23.05462187404089 0 0.3054621874040891 1.6989700043360187 0.0 0.4247425010840047 {I|L}M{I|L}[R{I|L}];{I|L}{I|L}M[R{I|L}] 8.3022;4.7246 -;- 45 + 1 1.191 100973.5 1.0 9901 5605 15500 HBL1_DMSO_200M_050219_1,15508 HBL1_DMSO_200M_050219_1,15508, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15509 75.873 149.0 554270.0 25 0 45080.0 + 10367 FSAEDIAKI 9 129 497.2476037996882 992.4806546661764 2 497.2507812380791 MULTI CID FTMS 0 0 0 15500 159672.3125 0.4540853797261365 -5 0.3454818725585937 9 Unmodified _FSNADIDVL_ ENSG00000112118|ENST00000596288|MCM3;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;nc|ENSG00000112118|P25205-2|MCM3 13.50788311687929 0.4710407108020397 3 {M(Oxidation (M))|F}S{[CP]|[EA]}D{I|L}AK{I|L} 9 3 + 22.819 0.0 0.0 2.2992 2.2992 68.528 0.0 0.0 0.0 4.402369671232062 5.027063354273562 4.402369671232062 1.7069622716897612 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}S{[CP]|[EA]}D{I|L}AK{I|L};{M(Oxidation (M))|F}SH[HQ]PK{I|L};[TP]M[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]PK{I|L};{M(Oxidation (M))|F}S{[CP]|[EA]}RREV;{M(Oxidation (M))|F}S{[CP]|[EA]}RRD{I|L};DDV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]PK{I|L};DD{[CT]|[{M(Oxidation (M))|F}G]}D{I|L}AK{I|L};{M(Oxidation (M))|F}S[HV][Y{I|L}]EV;{M(Oxidation (M))|F}S[HV][Y{I|L}]D{I|L};{M(Oxidation (M))|F}S[HV]N[YK]V 2.2992;2.1272;1.3812;1.0774;1.01;0.84453;0.83909;0.70667;0.63921;0.54122 -;-;-;-;-;-;-;-;-;- 488 + 1 1.191 65407.5 1.0 9902 5605 15500 HBL1_DMSO_200M_050219_1,15509 HBL1_DMSO_200M_050219_1,15509,FSNADIDVL False False FSAEDIAKI 75.873331 497.250781238079 0.0 15500.0 ENSG00000112118|ENST00000596288|MCM3;;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;;nc|ENSG00000112118|P25205-2|MCM3 2.430417855580648 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15510 75.883 557.0 233040.0 25 0 29660.0 + 19408 LESRRRRRGP 10 167 641.8827622598698 0 641.8859130740166 PEAK CID FTMS 0 0 0 15500 172493.578125 0.2375482430243427 4 -0.25213623046875 10 Unmodified _LESRRRRRGP_ REV__ENST00000577830.5_2_17:55962997-55963066:-|nuORF 4.897010918128616 0.3961065659209837 3 {I|L} 1 -1 6.9897 0.0 0.0 0.54532 0.0 0.0 280.1981284242332 885.4476412408811 1165.6457696651144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.54532 + + 79 + 1 1.191 105639.9 1.0 9903 5605 15500 HBL1_DMSO_200M_050219_1,15510 HBL1_DMSO_200M_050219_1,15510,LESRRRRRGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15511 75.886 172.0 219160.0 25 0 14091.0 -1 0 74 666.0582074050882 2660.2037237539525 4 666.3104125857353 MULTI CID FTMS 0 0 0 15500 171019.25 0.6812078377384254 -2 0.1609954833984375 11 3 [YQ]{I|L} 3 -1 11.567 0.0 0.0 0.43481 0.0 0.0 0.0 2252.976342732721 2252.976342732721 -2.80394370788877 0.0 -2.80394370788877 0.0 0 0.0 0.0 0.0 0.3494850021680094 [YQ]{I|L} 0.43481 - 84 1 1.191 38111.5 1.0 9904 5605 15500 HBL1_DMSO_200M_050219_1,15511 HBL1_DMSO_200M_050219_1,15511, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15512 75.9 800.0 389830.0 25 0 37622.0 + 41332 VPILAPRI 8 185 439.79465879941694 877.5747646656339 2 439.7944213747978 MULTI CID FTMS 0 0 0 15500 150053.25 0.0103858475076374 13 -0.9692001342773438 12 Unmodified _VPILAPRI_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 46.92087301778293 0.1537303740847981 3 VP{I|L}{I|L}A[RP]{I|L} 8 0 + 65.25 0.0 0.0 7.4353 7.4353 83.368 0.0 0.0 0.0 38.06138176324678 8.693255432662717 8.693255432662717 2.015449934959726 0 0.766375387189108 1.2218487496163564 0.0 0.3252574989159953 + + VP{I|L}{I|L}A[RP]{I|L};V{I|L}P{I|L}A[RP]{I|L} 7.4353;7.2056 +;- + 588 + 1 1.191 243461.0 0.8700000047683716 9905 5605 15500 HBL1_DMSO_200M_050219_1,15512 HBL1_DMSO_200M_050219_1,15512,VPILAPRI False True VPILAPRI 75.900308 439.794421374798 617186280.0 15500.0 nc|ENSG00000170540|Q15041-3|ARL6IP1;;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;;ENSG00000170540|ENST00000304414|ARL6IP1;;nc|ENSG00000170540|Q15041-2|ARL6IP1 4.479738553365071 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15514 75.905 2.3 24388000.0 25 0 2770500.0 + 10581 FVIRNIVEA 9 63 530.8111930196629 1059.6078331061258 2 530.8116332888603 MULTI CID FTMS 0 0 0 15513 23021100.0 0.8109384236885283 2 -0.13775634765625 1 Unmodified _FVIRNIVEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 41.8396318013385 0.0653578398400075 3 [{M(Oxidation (M))|F}V][R{I|L}]N{I|L}VEA 9 0 + 38.152 0.0 0.0 3.6006 3.6006 80.637 0.0 0.0 0.0 1.4562841055376268 20.70493438421168 1.4562841055376268 9.208187539523756 0 0.7059771852360797 0.0 0.0 0.0 + + [{M(Oxidation (M))|F}V][R{I|L}]N{I|L}VEA;[{M(Oxidation (M))|F}V][R{I|L}]GG{I|L}VEA;[{M(Oxidation (M))|F}V][R{I|L}][KA]V{NN|[MP]|[D{I|L}]|[EV]} 3.6006;2.7316;0.32267 +;-;- + 51 1 1.203 52461.0 1.0 9906 5606 15513 HBL1_DMSO_200M_050219_1,15514 HBL1_DMSO_200M_050219_1,15514,FVIRNIVEA True True FVIRNIVEA 75.904526 530.81163328886 1040643904.0 15513.0 ENST00000465478.1_1_8:93156318-93156576:-|nuORF;;ENSG00000197728|ENST00000646449|RPS26;;nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENST00000447425.1_1_7:22813267-22813561:-|nuORF 6.008627255757649 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15515 75.906 29.0 1449600.0 25 0 256460.0 + 41937 VQIDDSYLVEA 11 66 626.3089463894364 1250.6033398456727 2 626.3091308474541 MULTI CID FTMS 0 0 0 15513 1889599.75 1.0 0 0.0 2 Unmodified _VQIDDSYLVEA_ ENSG00000140548|ENST00000268154|ZNF710 38.61474834105838 0.2337350513322792 3 {I|L}QV{I|L}D{M(Oxidation (M))|F}EA 8 7 51.139 0.0 0.0 4.0892 0.0 0.0 317.1572367725025 0.0 317.1572367725025 0.0 39.2279848331593 0.0 0.0 0 0.0 0.0 2.079689690656103 0.4247425010840047 {I|L}QV{I|L}D{M(Oxidation (M))|F}EA 4.0892 - 413 + 1 1.203 41770.7 1.0 9907 5606 15513 HBL1_DMSO_200M_050219_1,15515 HBL1_DMSO_200M_050219_1,15515,VQIDDSYLVEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15516 75.907 58.0 1561800.0 25 0 348320.0 + 32242 RWPDYVREL 9 67 617.3225132351072 1232.6304735370145 2 617.3231078982353 MULTI CID FTMS 0 0 0 15513 1127918.875 0.2145591671385849 -10 0.6989517211914062 3 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 46.0223103267499 0.0490911897871712 3 [WR][DP]YVRE{I|L} 9 0 + 66.079 0.0 0.0 5.3608 5.3608 90.118 0.0 0.0 0.0 7.912027720371668 50.86242476018043 7.912027720371668 66.07894990110104 0 1.325257498915995 1.3010299956639813 0.0 1.048455006504028 + + [WR][DP]YVRE{I|L} 5.3608 + + 182 1 1.203 73654.1 1.0 9908 5606 15513 HBL1_DMSO_200M_050219_1,15516 HBL1_DMSO_200M_050219_1,15516,RWPDYVREL True True RWPDYVREL 75.907166 617.323107898235 622206796.0 15513.0 nc|ENSG00000174953|Q9H2U1-2|DHX36;;ENSG00000174953|ENST00000496811|DHX36;;nc|ENSG00000174953|Q9H2U1-3|DHX36 9.797182401021322 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15517 75.909 61.0 1135800.0 25 0 102130.0 + 4870 DGATILKL 8 97 415.75265823382784 829.4907635344557 2 415.7528564333916 MULTI CID FTMS 0 0 0 15513 1048210.125 0.8138346872527638 2 -0.13775634765625 4 Unmodified _DGATILKL_ ENSG00000120438|ENST00000321394|TCP1;ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;nc|ENSG00000135624|Q99832-3|CCT7 39.957323273325 0.2350051964751539 3 [DG]AT{I|L}{I|L}K{I|L} 8 0 [DG]A + + 40.094 21.171 8.7094 4.8335 4.8335 55.074 0.0 0.0 0.0 0.0 15.089869102636158 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.2302046884880938 + + [DG]AT{I|L}{I|L}K{I|L} 4.8335 + + 93 + 1 1.203 57007.3 1.0 9909 5606 15513 HBL1_DMSO_200M_050219_1,15517 HBL1_DMSO_200M_050219_1,15517,DGATILKL False True DGATILKL 75.908655 415.752856433392 24256160.25 15513.0 ENST00000461290.5_1_2:73461506-73471178:+|nuORF;;nc|ENSG00000135624|Q99832-3|CCT7;;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;;ENSG00000135624|ENST00000258091|CCT7;;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;;ENSG00000120438|ENST00000321394|TCP1 5.267347971598308 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15518 75.91 19.0 2419700.0 25 0 240350.0 + 29777 QPYMPIPHV 9 76 541.2771908823693 1080.5398288315384 2 541.2758056521416 MULTI CID FTMS 0 0 0 15513 1039395.875 0.6866093146777527 -2 0.0984725952148437 5 Unmodified _QPYMPIPHV_ ENSG00000174106|ENST00000308330|LEMD3 13.50788311687929 0.4710407108020397 3 M 1 8 14.604 0.0 0.0 1.3516 0.0 0.0 931.4882216311464 0.0 931.4882216311464 0.0 5.931956078477468 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 1.3516 + + 38 + 1 1.203 42984.9 1.0 9910 5606 15513 HBL1_DMSO_200M_050219_1,15518 HBL1_DMSO_200M_050219_1,15518,QPYMPIPHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15519 75.911 60.0 827400.0 25 0 90277.0 + 41455 VPLPAENVTI 10 84 526.8031801936137 1051.5918074540273 2 526.8033325076103 MULTI CID FTMS 0 0 0 15513 971418.6875 0.2059802650571932 -6 0.4006729125976562 6 Unmodified _VPLPAENVTI_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 43.85829265575387 0.1168243637355526 3 [VP]{I|L}[PA]ENVT{I|L} 10 0 + 40.512 0.0 0.0 3.8525 3.8525 70.899 0.0 0.0 0.0 1.249387366082999 9.934691960977275 1.249387366082999 1.249387366082999 0 0.8182503180159344 0.9208187539523752 0.0 0.4247425010840047 + + [VP]{I|L}[PA]ENVT{I|L};[{I|L}P]V[PA]ENVT{I|L};[{I|L}P][PA]VENVT{I|L};[{I|L}P][PA]EVNVT{I|L};[PA]ENV[{I|L}P]VT{I|L};[VP][C(Carbamidomethyl (C))H]KVVT{I|L};[{I|L}P][PA]ENVVT{I|L};[PA]EN[{I|L}P]VVT{I|L};[VP]{I|L}[PA]EGGVT{I|L};[PA]ENVV[{I|L}P]T{I|L} 3.8525;3.7336;3.7336;3.67;3.533;3.5175;3.3837;2.8847;2.5771;2.5565 +;-;-;-;-;-;-;-;-;- + 466 1 1.203 44711.1 1.0 9911 5606 15513 HBL1_DMSO_200M_050219_1,15519 HBL1_DMSO_200M_050219_1,15519,VPLPAENVTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15520 75.913 40.0 1268400.0 25 0 151540.0 + 34438 SLWRKGPLM 9 77 544.3097582509859 1086.6049635687716 2 544.3110229372978 MULTI CID FTMS 0 0 0 15513 964040.4375 0.2647655896345324 9 -0.763885498046875 7 Unmodified _SLWRKGPLM_ REV__ENSG00000129315|ENST00000261900|CCNT1 8.593279151180031 0.6146971463335029 3 {I|L} 1 -1 10.0 0.0 0.0 0.9203 0.0 0.0 955.5099298547076 0.0 955.5099298547076 0.0 -14.69273760456403 -14.69273760456403 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.9203 + + 29 + 1 1.203 44649.5 1.0 9912 5606 15513 HBL1_DMSO_200M_050219_1,15520 HBL1_DMSO_200M_050219_1,15520,SLWRKGPLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15521 75.914 76.0 1195800.0 25 0 171960.0 + 27685 PLITGTRLAV 10 112 520.8259146440049 1039.6372763548095 2 520.8273803591728 MULTI CID FTMS 0 0 0 15513 752634.5625 0.4426473504022041 3 -0.1969451904296875 8 Unmodified _PLITGTRLAV_ REV__ENSG00000130518|ENST00000392413|IQCN 17.11289562659939 0.5604042439455784 3 {I|L}{I|L}Q[HK]T{I|L} 7 -1 31.079 0.0 0.0 2.9895 0.0 0.0 188.11384067006355 0.0 188.11384067006355 0.0 17.891887050185584 0.0 0.0 0 0.5 0.0 0.2134679910804404 0.0 {I|L}{I|L}Q[HK]T{I|L} 2.9895 - 128 + 1 1.203 73228.1 1.0 9913 5606 15513 HBL1_DMSO_200M_050219_1,15521 HBL1_DMSO_200M_050219_1,15521,PLITGTRLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15522 75.916 95.0 1009100.0 25 0 177270.0 + 10690 FVVEDHILHV 10 100 403.2206574083178 1206.6401428251536 3 403.2203552126884 MULTI CID FTMS 0 0 0 15513 621931.4375 0.81352654974803 -1 0.0551910400390625 9 Unmodified _FVVEDHILHV_ ENSG00000138190|ENST00000260762|EXOC6;nc|ENSG00000138190|Q8TAG9-2|EXOC6 57.72198328787511 0.0425618229276495 3 [{M(Oxidation (M))|F}V]VEDH{I|L}{I|L}HV 10 0 + 57.304 0.0 0.0 4.749 4.749 76.487 0.0 0.0 0.0 15.50907468880581 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.3252574989159953 0.8239087409443188 0.5 0.0 + + [{M(Oxidation (M))|F}V]VEDH{I|L}{I|L}HV;[{M(Oxidation (M))|F}V]VEDH{I|L}{I|L}VH;[{M(Oxidation (M))|F}V]VEDH{I|L}[HV]{I|L};[{M(Oxidation (M))|F}V]V[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]{I|L}HV;[{M(Oxidation (M))|F}V]V[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]{I|L}VH;{NN|[MP]|[D{I|L}]|[EV]}H{I|L}H[{M(Oxidation (M))|F}V]V{NN|[MP]|[D{I|L}]|[EV]};[H{I|L}]D{I|L}H[{M(Oxidation (M))|F}V]V{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]VHHR[WQ]V;[{M(Oxidation (M))|F}V]VY[YG]{I|L}{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}V]V[{M(Oxidation (M))|F}V]H{I|L}{M(Oxidation (M))|F}TV 4.749;4.4996;3.3263;2.286;2.0365;1.6603;1.3786;1.3784;1.2918;1.1882 +;-;-;-;-;-;-;-;-;- + 643 + 1 1.203 76723.6 1.0 9914 5606 15513 HBL1_DMSO_200M_050219_1,15522 HBL1_DMSO_200M_050219_1,15522,FVVEDHILHV True True FVVEDHILHV 75.916328 403.220355212688 6600272.125 15513.0 nc|ENSG00000138190|Q8TAG9-2|EXOC6;;ENSG00000138190|ENST00000260762|EXOC6 7.422844250996907 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15523 75.919 149.0 318990.0 25 0 58685.0 8321 ERKRHLRML 9 65 619.8693062180286 1237.724059502857 2 619.8695556521416 MULTI CID FTMS 0 0 0 15513 552657.3125 0.2034609486422985 -10 0.6989517211914062 10 Unmodified _ERKRHLRML_ ENST00000470240.5_1_3:160122203-160122284:+|nuORF 2.302733041254933 0.8342969208511092 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 1.203 41639.4 1.0 9915 5606 15513 HBL1_DMSO_200M_050219_1,15523 HBL1_DMSO_200M_050219_1,15523,ERKRHLRML False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15524 75.923 195.0 540720.0 25 0 37537.0 26905 PDLPEARLLL 10 155 568.8354306481845 1135.6563083631688 2 568.8351318240166 MULTI CID FTMS 0 0 0 15513 460709.65625 0.1514902275725506 9 -0.763885498046875 11 Unmodified _PDLPEARLLL_ ENST00000307790.7_3_22:30204126-30209496:-|nuORF 6.723162845929126 0.6955379296933136 3 {I|L} 1 9 13.979 0.0 0.0 1.231 0.0 0.0 1004.5612441315268 0.0 1004.5612441315268 0.0 3.1774187340745623 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.231 + + 417 + 1 1.203 81339.2 1.0 9916 5606 15513 HBL1_DMSO_200M_050219_1,15524 HBL1_DMSO_200M_050219_1,15524,PDLPEARLLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15525 75.931 431.0 369130.0 25 0 66919.0 + -1 CCYYQLRCYCL 11 133 829.8292413834097 1657.6439298336193 2 830.8339111208916 MULTI CID FTMS 0 0 0 15513 335508.1875 0.9458366670854228 -1 0.0551910400390625 12 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))YYQLRC(Carbamidomethyl (C))YC(Carbamidomethyl (C))L_ REV__ENSG00000143340|ENST00000341785|FAM163A;REV__ENSG00000196990|ENST00000673969|FAM163B 0.3506318815782774 0.8734936314171269 3 {[VA]|[{I|L}G]}DAT{I|L}K{I|L} 8 -1 43.325 0.0 0.0 2.6136 0.0 0.0 0.0 843.1396923993302 843.1396923993302 17.319597742070258 0.0 0.0 0.0 0 0.0 2.0 1.2134679910804405 0.0 {[VA]|[{I|L}G]}DAT{I|L}K{I|L} 2.6136 - 4200 1 1.203 108781.2 1.0 9917 5606 15513 HBL1_DMSO_200M_050219_1,15525 HBL1_DMSO_200M_050219_1,15525,CCYYQLRCYCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15526 75.939 452.0 263180.0 25 0 14267.0 + -1 GPGGTSDAYAVIQV 14 161 667.8325537780086 1333.650554622817 2 668.3366577029228 MULTI CID FTMS 0 0 0 15513 303921.375 0.9528569442472692 -2 0.0984725952148437 13 Carbamidomethyl (C) _HDC(Carbamidomethyl (C))VFFAVQVL_ ENST00000522727.5_1_8:37735063-37756959:-|nuORF;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1 22.736283301280096 0.5583477779825423 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V[YC(Carbamidomethyl (C))][DP]PQV 11 -1 + 28.76 0.0 0.0 2.1565 2.1565 71.255 0.0 0.0 0.0 7.367585652254185 3.309932190414244 3.309932190414244 3.309932190414244 0 0.0 0.0 1.274227503252014 0.4247425010840047 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V[YC(Carbamidomethyl (C))][DP]PQV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V[YC(Carbamidomethyl (C))][DP]PN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V[YC(Carbamidomethyl (C))][DP]QPV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V[YC(Carbamidomethyl (C))][DP]PGAV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V[YC(Carbamidomethyl (C))]{I|L}[HQ]{[SA]|[TG]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V[YC(Carbamidomethyl (C))][DP]PGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}CQV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}CN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V[WR][WD]C{I|L} 2.1565;1.9083;1.2545;1.2262;1.1794;0.97798;0.51654;0.26836;0.20687 -;-;-;-;-;-;-;-;- 1499 + 1 1.203 93787.5 1.0 9918 5606 15513 HBL1_DMSO_200M_050219_1,15526 HBL1_DMSO_200M_050219_1,15526,HDCVFFAVQVL False False GPGGTSDAYAVIQV 75.938807 667.8356 8113537.0 15513.0 ENST00000522727.5_1_8:37735063-37756959:-|nuORF;;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;;ENSG00000156675|ENST00000330843|RAB11FIP1;;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1 6.242111841837565 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15527 75.948 508.0 251890.0 25 0 50609.0 -1 LECVYSQWCMY 11 127 777.8067631544496 1553.5989733756992 2 777.8066284060478 MULTI CID FTMS 0 0 0 15513 205432.578125 0.0168801670366184 18 -1.4150543212890625 14 2 Carbamidomethyl (C),Oxidation (M) _LEC(Carbamidomethyl (C))VYSQWC(Carbamidomethyl (C))M(Oxidation (M))Y_ ENST00000371146.5_1_1:62916945-62917257:+|nuORF 1.3295316138638542 0.8688751186870782 3 [MT]G[C(Carbamidomethyl (C))R]DYYYYY 11 -1 + 35.511 0.0 0.0 2.2858 2.2858 71.642 0.0 0.0 0.0 3.503804559769506 9.580988702332968 3.503804559769506 3.503804559769506 0 0.7429928190999391 0.0 0.6861818737241735 1.2302046884880935 [MT]G[C(Carbamidomethyl (C))R]DYYYYY;[NG][SG]H[HM]YYYYY;YY{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}S[HA]YYY;GG[NS]H[HM]YYYYY;[MT]GY[HM]YYYYY;[NG][SG]E[{M(Oxidation (M))|F}E]YYYYY;[WE]E[{M(Oxidation (M))|F}E]YYYYY;GG[NS]E[{M(Oxidation (M))|F}E]YYYYY;[WE]EY[{M(Oxidation (M))|F}E]YYYY;[WE]E[HM][NG]YYYY 2.2858;2.0602;1.9635;1.786;1.6877;1.6727;1.6594;1.3985;1.3523;1.2287 -;-;-;-;-;-;-;-;-;- 955 1 1.203 90954.0 1.0 9919 5606 15513 HBL1_DMSO_200M_050219_1,15527 HBL1_DMSO_200M_050219_1,15527,LECVYSQWCMY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15528 75.962 800.0 493670.0 25 0 35783.0 + 27200 PGIYHLCCEF 10 280 394.5088008750155 1180.5045732252463 3 394.5089904665947 MULTI CID FTMS 0 0 0 15513 179978.4375 0.3698772842899499 -2 0.0984725952148437 15 Unmodified _PGIYHLCCEF_ REV__ENST00000262225.7_1_12:124081454-124081643:+|nuORF 15.847184025352805 0.5816416552707754 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}YAYP 8 -1 47.344 0.0 0.0 4.0105 0.0 0.0 0.0 172.9980830562411 172.9980830562411 9.03335040558744 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}YAYP 4.0105 - 5136 1 1.203 308007.8 0.8899999856948853 9920 5606 15513 HBL1_DMSO_200M_050219_1,15528 HBL1_DMSO_200M_050219_1,15528,PGIYHLCCEF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15529 75.972 617.0 86379.0 25 0 13006.0 -1 0 76 1099.008471667767 0 1099.008471667767 PEAK CID FTMS 0 0 0 -1 0 16 3 YYT 3 -1 9.9658 0.0 0.0 0.45382 0.0 0.0 946.4679565454644 819.3571261041624 1765.825082649627 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 YYT 0.45382 - 152 + 1 1.203 49314.7 1.0 9921 5606 15513 HBL1_DMSO_200M_050219_1,15529 HBL1_DMSO_200M_050219_1,15529, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15531 75.977 1.0 48852000.0 25 0 5805500.0 + 41006 VMAPRTVLL 9 59 500.3044224539547 998.5942919747094 2 500.3050720095634 MULTI CID FTMS 0 0 0 15530 54343480.0 1.0 0 0.0 1 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 26.268140514670165 0.1969607489560049 3 VMA 3 6 48.188 0.0 0.0 4.8255 0.0 0.0 0.0 694.4270209220955 694.4270209220955 8.194765492042109 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + VMA 4.8255 + + 31 + 1 1.209 44636.1 1.0 9922 5607 15530 HBL1_DMSO_200M_050219_1,15531 HBL1_DMSO_200M_050219_1,15531,VMAPRTVLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15532 75.978 1.7 28497000.0 25 0 4486700.0 + 34911 SQIHDIVLV 9 56 512.2952026555276 1022.5758523778552 2 512.2956420779228 MULTI CID FTMS 0 0 0 15530 33466274.0 1.0 0 0.0 2 Unmodified _SQIHDIVLV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 36.506200033944 0.094635877243972 3 [HD]{I|L}{[QS]|[NT]}{I|L}V{I|L}V 9 4 + 58.79 0.0 0.0 5.7492 5.7492 79.897 0.0 0.0 0.0 0.915149811213496 36.57190309977331 0.915149811213496 3.0102999566398125 0 0.8807196863200843 0.0 1.110924374808178 0.0 [HD]{I|L}{[QS]|[NT]}{I|L}V{I|L}V;{[QS]|[NT]}[H{I|L}]D{I|L}V{I|L}V;[H{I|L}]{[QS]|[NT]}D{I|L}V{I|L}V;[H{I|L}]D{[QS]|[NT]}{I|L}V{I|L}V;[HD]{I|L}V[QT]V{I|L}V;[{I|L}V][HD][QT]V{I|L}V;[H{I|L}]DV[QT]V{I|L}V;[HD]{I|L}V{I|L}{[QS]|[NT]}{I|L}V;[{I|L}V][Y{M(Oxidation (M))|F}][NG]V{I|L}V;[{I|L}V][HD]{I|L}{[QS]|[NT]}{I|L}V 5.7492;5.4549;5.3601;5.3601;5.1131;4.8461;4.7239;4.4464;4.3959;4.1794 -;+;-;-;-;-;-;-;-;- + 168 1 1.209 43513.6 1.0 9923 5607 15530 HBL1_DMSO_200M_050219_1,15532 HBL1_DMSO_200M_050219_1,15532,SQIHDIVLV True True SQIHDIVLV 75.977747 512.295642077923 490416160.0 15530.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 6.397967020670573 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15533 75.979 8.0 5741000.0 25 0 1140400.0 + 26208 NQIEDNDDFQL 11 64 675.7940088956558 1349.5734648581115 2 675.7944824099541 MULTI CID FTMS 0 0 0 15530 6975425.5 0.3551912502916464 4 -0.2801361083984375 3 Unmodified _NQIEDNDDFQL_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 65.47368725323818 0.0469305343733202 3 {[QN]|[E{I|L}]|[KN]}{I|L}EDNDD 8 3 64.315 0.0 0.0 4.7656 0.0 0.0 0.0 403.1954259755599 403.1954259755599 43.45729011406135 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 1.9361818737241727 + {[QN]|[E{I|L}]|[KN]}{I|L}EDNDD 4.7656 + + 286 1 1.209 43862.7 1.0 9924 5607 15530 HBL1_DMSO_200M_050219_1,15533 HBL1_DMSO_200M_050219_1,15533,NQIEDNDDFQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15534 75.98 22.0 2297000.0 25 0 478080.0 + -1 PGKVVCHRLR 10 62 611.3559007792654 1220.6972486253308 2 611.3562499880791 MULTI CID FTMS 0 0 0 15530 2997496.25 0.7844556034865726 -9 0.65606689453125 4 Carbamidomethyl (C) _PGKVVC(Carbamidomethyl (C))HRLR_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 1.4819007175156935 0.719781833666733 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.209 45117.4 1.0 9925 5607 15530 HBL1_DMSO_200M_050219_1,15534 HBL1_DMSO_200M_050219_1,15534,PGKVVCHRLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15535 75.981 18.0 2230200.0 25 0 110190.0 + 27372 PIATSLPPNY 10 83 536.787520797261 1071.560488661322 2 537.2874633669853 MULTI CID FTMS 0 0 0 15530 1315119.375 0.0072398272814384 34 -2.5489501953125 5 Unmodified _PIATSLPPNY_ ENSG00000135905|ENST00000258390|DOCK10;nc|ENSG00000135905|Q96BY6-3|DOCK10 21.74664581756881 0.480091245866545 3 [{I|L}P]YP{I|L}P 6 6 26.119 0.0 0.0 2.4374 0.0 0.0 0.0 388.1472555893094 388.1472555893094 9.709853634181048 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [{I|L}P]YP{I|L}P 2.4374 - 139 1 1.209 39484.2 1.0 9926 5607 15530 HBL1_DMSO_200M_050219_1,15535 HBL1_DMSO_200M_050219_1,15535,PIATSLPPNY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15536 75.983 56.0 1042300.0 25 0 95161.0 + 24892 MPNPSLAQVKI 11 96 599.3365542770962 1196.6585556209925 2 599.3373290896416 MULTI CID FTMS 0 0 0 15530 998121.1875 1.0 0 0.0 6 Unmodified _MPNPSLAQVKI_ ENSG00000152240|ENST00000282058|HAUS1;nc|ENSG00000152240|Q96CS2-2|HAUS1 64.9267550582149 0.0491502274424461 3 MPNPS{I|L}[QA]VK{I|L} 11 0 + 74.547 0.0 0.0 6.2296 6.2296 87.713 0.0 0.0 0.0 57.95107970564378 7.453014871503285 7.453014871503285 9.128498242811006 0 1.7302046884880935 1.3979400086720375 0.3494850021680094 0.0 + + MPNPS{I|L}[QA]VK{I|L};MPGGPS{I|L}[QA]VK{I|L};[QA]V[TP][NP]MVK{I|L};[QA]V[TP][NP]VMK{I|L};[QA]V[TP]V[NP]MK{I|L} 6.2296;5.4667;1.0013;0.22738;0.22738 +;-;-;-;- + 138 + 1 1.209 51054.3 1.0 9927 5607 15530 HBL1_DMSO_200M_050219_1,15536 HBL1_DMSO_200M_050219_1,15536,MPNPSLAQVKI True True MPNPSLAQVKI 75.982713 599.337329089642 7688366.0 15530.0 nc|ENSG00000152240|Q96CS2-2|HAUS1;;ENSG00000152240|ENST00000282058|HAUS1 7.131998538970947 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15537 75.984 49.0 1230900.0 25 0 100470.0 + 29631 QMISRIEYI 9 77 576.8076246063771 1151.600696279554 2 576.8085204958916 MULTI CID FTMS 0 0 0 15530 996186.125 1.0 0 0.0 7 Unmodified _QMISRIEYI_ ENSG00000141551|ENST00000314028|CSNK1D;ENSG00000213923|ENST00000396832|CSNK1E;ENST00000578904.1_1_17:80208040-80213403:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D 49.55428908609986 0.0413471690215031 3 QM{I|L}S 4 5 42.013 0.0 0.0 3.6483 0.0 0.0 0.0 689.3706148736936 689.3706148736936 16.542294029923 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 + QM{I|L}S 3.6483 + + 141 + 1 1.209 53903.5 1.0 9928 5607 15530 HBL1_DMSO_200M_050219_1,15537 HBL1_DMSO_200M_050219_1,15537,QMISRIEYI True True QMISRIEYI 75.984034 576.808520495892 6744918.0 15530.0 ENSG00000213923|ENST00000396832|CSNK1E;;nc|ENSG00000141551|P48730-2|CSNK1D;;ENSG00000141551|ENST00000314028|CSNK1D;;ENST00000578904.1_1_17:80208040-80213403:-|nuORF 4.580384731292725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15538 75.985 56.0 1801500.0 25 0 156220.0 + 32252 RWPDYVREL 9 91 411.88404851646834 1232.630316149605 3 411.8839294314384 MULTI CID FTMS 0 0 0 15530 803995.125 0.30206422134679 -9 0.65606689453125 8 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 32.037481411007896 0.1235546156350648 3 [WR]PDYVRE{I|L} 9 0 + 39.049 0.0 0.0 3.1679 3.1679 80.324 0.0 0.0 0.0 7.049122282282582 14.86732654185856 7.049122282282582 10.39829194401312 0 1.8187339429602345 1.5228787452803376 0.0 0.0 + + [WR]PDYVRE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YV{I|L}WV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YV{[RE]|[WV]}{I|L};[DP][WR]YVRE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L}VWV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L}[RD]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}YVWV;[WP]RDYVRE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}Y[RD]{I|L} 3.1679;2.3243;2.2145;2.0342;1.8359;1.6201;1.1399;1.0876;0.92411 +;-;-;-;-;-;-;-;- + 216 1 1.209 83819.6 1.0 9929 5607 15530 HBL1_DMSO_200M_050219_1,15538 HBL1_DMSO_200M_050219_1,15538,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15539 75.987 44.0 1498700.0 25 0 158270.0 + 12835 GVVDGIYRL 9 89 496.2827494120097 990.5509458908192 2 496.2824279665947 MULTI CID FTMS 0 0 0 15530 720549.25 0.5419734646717439 -2 0.1272354125976562 9 Unmodified _GVVDGIYRL_ ENSG00000004777|ENST00000007510|ARHGAP33;ENSG00000186517|ENST00000368013|ARHGAP30;ENST00000461003.5_1_1:161022982-161039420:-|nuORF;nc|ENSG00000004777|O14559-10|ARHGAP33;nc|ENSG00000004777|O14559-11|ARHGAP33;nc|ENSG00000186517|Q7Z6I6-2|ARHGAP30;nc|ENSG00000186517|Q7Z6I6-4|ARHGAP30 43.85829265575387 0.0542763391141878 3 [VG]VDG{I|L}YR{I|L} 9 0 + 70.992 0.0 0.0 7.1669 7.1669 93.956 0.0 0.0 0.0 48.05970632012567 12.447727244830489 12.447727244830489 18.750612633917 0 0.7302046884880937 2.0 0.0 0.3054621874040891 + + [VG]VDG{I|L}YR{I|L};[VG]V{I|L}[DG]YR{I|L};[VG]V{[RE]|[WV]}YR{I|L};[VG][RD]{I|L}YR{I|L};[VG]V[{M(Oxidation (M))|F}V]{[DS]|[MA]|[CV]|TT}R{I|L} 7.1669;5.2739;4.9238;4.6155;2.9748 +;-;-;-;- + 163 + 1 1.209 53660.6 1.0 9930 5607 15530 HBL1_DMSO_200M_050219_1,15539 HBL1_DMSO_200M_050219_1,15539,GVVDGIYRL True True GVVDGIYRL 75.986663 496.282427966595 9437624.0 15530.0 ENSG00000004777|ENST00000007510|ARHGAP33;;nc|ENSG00000004777|O14559-11|ARHGAP33;;nc|ENSG00000186517|Q7Z6I6-2|ARHGAP30;;nc|ENSG00000004777|O14559-10|ARHGAP33;;nc|ENSG00000186517|Q7Z6I6-4|ARHGAP30;;ENST00000461003.5_1_1:161022982-161039420:-|nuORF;;ENSG00000186517|ENST00000368013|ARHGAP30 5.679242451985677 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15540 75.988 44.0 1281200.0 25 0 63280.0 + 31177 RLPKDFVDL 9 92 551.8166979396094 1101.6188429460187 2 551.8166381716728 MULTI CID FTMS 0 0 0 15530 627816.375 0.6929491326048111 -5 0.3613662719726562 10 Unmodified _RLPKDFVDL_ ENSG00000151465|ENST00000281141|CDC123;ENST00000497963.1_1_10:12288111-12291735:+|nuORF;ENST00000498747.1_1_10:12279256-12292333:+|nuORF 19.361941925380144 0.3125782356748823 3 D{M(Oxidation (M))|F}VD{I|L} 5 4 39.65 0.0 0.0 3.5993 0.0 0.0 494.3341236798844 0.0 494.3341236798844 0.0 27.86741763874802 0.0 0.0 0 0.6462566630072955 0.0 0.0 0.0 + D{M(Oxidation (M))|F}VD{I|L} 3.5993 + + 131 1 1.209 49839.5 1.0 9931 5607 15530 HBL1_DMSO_200M_050219_1,15540 HBL1_DMSO_200M_050219_1,15540,RLPKDFVDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15541 75.989 48.0 1354900.0 25 0 180260.0 + 26263 NQMDGFDTL 9 95 520.7210270161534 1039.4275010991066 2 520.7211791872978 MULTI CID FTMS 0 0 0 15530 626416.0625 1.0 0 0.0 11 Unmodified _NQMDGFDTL_ ENSG00000100519|ENST00000445930|PSMC6;ENST00000216407.4_1_12:68867655-68868498:+|nuORF;ENST00000504847.1_1_5:33971458-33972451:+|nuORF 11.640296217721598 0.521594087909532 3 G{I|L} 2 7 17.959 0.0 0.0 1.7278 0.0 0.0 851.3108761985192 0.0 851.3108761985192 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L} 1.7278 - 80 + 1 1.209 57037.2 1.0 9932 5607 15530 HBL1_DMSO_200M_050219_1,15541 HBL1_DMSO_200M_050219_1,15541,NQMDGFDTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15542 75.99 40.0 1475600.0 25 0 116120.0 + -1 YPFKPPMI 8 90 504.7645119820783 1007.5144710309568 2 504.7645751833916 MULTI CID FTMS 0 0 0 15530 575110.5 0.7890396017487589 -1 0.0720443725585937 12 Oxidation (M) _YPFKPPM(Oxidation (M))I_ ENSG00000156587|ENST00000287156|UBE2L6 34.18733598223924 0.3315367612694167 3 YP{M(Oxidation (M))|F}KP{M(Oxidation (M))|F} 6 -1 51.464 0.0 0.0 5.108 0.0 0.0 0.0 225.08797632388908 225.08797632388908 23.047444008242906 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 YP{M(Oxidation (M))|F}KP{M(Oxidation (M))|F} 5.108 - 185 + 1 1.209 53496.5 1.0 9933 5607 15530 HBL1_DMSO_200M_050219_1,15542 HBL1_DMSO_200M_050219_1,15542,YPFKPPMI False False YPFKPPMI 75.990376 504.764575183392 21831178.0 15530.0 ENSG00000156587|ENST00000287156|UBE2L6 7.093558629353841 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15543 75.992 77.0 564870.0 25 0 67656.0 + 38832 TVIAENELLGA 11 79 565.3087253560291 1128.602897778858 2 565.3088256716728 MULTI CID FTMS 0 0 0 15530 510660.6875 1.0 0 0.0 13 Unmodified _TVIAENELLGA_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 26.268140514670165 0.4754186812857754 3 {NN|[MP]|[D{I|L}]|[EV]}Q{[CP]|[EA]}{[TV]|[{I|L}S]}{I|L}{I|L}Q 10 6 {NN|[MP]|[D{I|L}]|[EV]}Q{[CP]|[EA]}{[TV]|[{I|L}S]}{I|L} + + 24.024 14.346 1.65 2.1286 2.1286 48.951 0.0 0.0 0.0 0.0 3.806266088553315 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}Q{[CP]|[EA]}{[TV]|[{I|L}S]}{I|L}{I|L}Q 2.1286 - 106 + 1 1.209 40505.1 1.0 9934 5607 15530 HBL1_DMSO_200M_050219_1,15543 HBL1_DMSO_200M_050219_1,15543,TVIAENELLGA False True TVIAENELLGA 75.992155 565.308825671673 3383216.25 15530.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 4.751925071080525 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15544 75.995 123.0 770230.0 25 0 53755.0 + 45053 YPYEYLGGHI 10 124 606.2901121708721 1210.5656714085442 2 606.2913696169853 MULTI CID FTMS 0 0 0 15530 374623.0625 0.932146491451042 1 -0.0657119750976562 14 Unmodified _YPYEYLGGHI_ ENSG00000158402|ENST00000323760|CDC25C;nc|ENSG00000158402|P30307-2|CDC25C;nc|ENSG00000158402|P30307-3|CDC25C;nc|ENSG00000158402|P30307-4|CDC25C 67.34385681178166 0.0190221733545476 3 YPYEY{I|L}GG[H{I|L}] 10 0 + 85.157 0.0 0.0 7.0344 7.0344 84.79 0.0 0.0 0.0 52.30327215271494 4.259687322722812 4.259687322722812 3.521825181113627 0 1.1307196863200843 2.0 0.3494850021680094 0.0 + + YPYEY{I|L}GG[H{I|L}];YPYEY{I|L}N[H{I|L}];YPYEY{I|L}G[HV]A;YPYE[R{I|L}]E{[QN]|[E{I|L}]|[KN]};YPY{I|L}[YE]GG[H{I|L}];YPY{I|L}[YE]N[H{I|L}];YPYE[R{I|L}]E[NG]A;YPYE[{I|L}T][HA]{M(Oxidation (M))|F}A;YPY{I|L}[YE]G[HV]A;YPYE[{I|L}T][TP]{NN|[MP]|[D{I|L}]|[EV]} 7.0344;6.7435;6.4571;5.4865;5.4234;5.1324;4.9514;4.8794;4.846;4.8281 +;-;-;-;-;-;-;-;-;- + 1086 + 1 1.209 71138.0 1.0 9935 5607 15530 HBL1_DMSO_200M_050219_1,15544 HBL1_DMSO_200M_050219_1,15544,YPYEYLGGHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15545 76.002 393.0 211240.0 25 0 13603.0 + -1 CQFMSYYEWSL 11 132 736.7972339508727 1471.5799149685454 2 736.7979003787041 MULTI CID FTMS 0 0 0 15530 243111.6875 0.4710985499482944 3 -0.1913604736328125 15 Oxidation (M) _CQFM(Oxidation (M))SYYEWSL_ REV__ENSG00000064313|ENST00000378164|TAF2 3.2813086475875832 0.8596665074481906 3 {[VA]|[{I|L}G]}VEQ 5 -1 25.942 0.0 0.0 1.7629 0.0 0.0 0.0 942.2799631465329 942.2799631465329 1.812412373755876 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}VEQ 1.7629 - 1063 1 1.209 62942.9 1.0 9936 5607 15530 HBL1_DMSO_200M_050219_1,15545 HBL1_DMSO_200M_050219_1,15545,CQFMSYYEWSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15546 76.009 404.0 636060.0 25 0 99310.0 + -1 LLFFILLSACL 11 205 655.3834148770865 1308.7522768209728 2 655.3850585818291 MULTI CID FTMS 0 0 0 15530 248967.28125 0.4413643918603217 -2 0.1272354125976562 16 Carbamidomethyl (C) _LLFFILLSAC(Carbamidomethyl (C))L_ REV__ENSG00000111729|ENST00000229332|CLEC4A;REV__nc|ENSG00000111729|Q9UMR7-2|CLEC4A 3.5964929083625545 0.858179447565866 3 [Y{M(Oxidation (M))|F}]VM{I|L} 5 -1 20.713 0.0 0.0 1.5827 0.0 0.0 0.0 652.3811739557249 652.3811739557249 3.291812460476251 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [Y{M(Oxidation (M))|F}]VM{I|L} 1.5827 - 785 + 1 1.209 197131.0 1.0 9937 5607 15530 HBL1_DMSO_200M_050219_1,15546 HBL1_DMSO_200M_050219_1,15546,LLFFILLSACL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15547 76.016 413.0 352320.0 25 0 22479.0 + -1 AVQPLLTSV 9 116 927.4238445410928 1852.8331361489847 2 927.932177722454 MULTI CID FTMS 0 0 0 15530 200658.578125 0.5729778449055044 6 -0.4921188354492187 17 nc|ENSG00000164597|Q9UP83-1|COG5;ENSG00000164597|ENST00000297135|COG5;nc|ENSG00000164597|Q9UP83|COG5;nc|ENSG00000164597|Q9UP83-3|COG5 3 [{I|L}P]{I|L}AN{I|L}TSV 9 -1 39.981 0.0 0.0 2.1578 0.0 0.0 0.0 941.276104248848 941.276104248848 19.3529633077462 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.2302046884880935 0.0 [{I|L}P]{I|L}AN{I|L}TSV 2.1578 - 2322 1 1.209 96210.1 1.0 9938 5607 15530 HBL1_DMSO_200M_050219_1,15547 HBL1_DMSO_200M_050219_1,15547, False False AVQPLLTSV 76.016401 927.932177722454 2481096.75 15530.0 nc|ENSG00000164597|Q9UP83-1|COG5;;ENSG00000164597|ENST00000297135|COG5;;nc|ENSG00000164597|Q9UP83|COG5;;nc|ENSG00000164597|Q9UP83-3|COG5 4.6493386427561445 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15548 76.018 79.0 549920.0 25 0 53572.0 + 42537 VTLVGRPTL 9 75 478.3003648756762 954.5861768181524 2 478.2989990115166 MULTI CID FTMS 0 0 0 15530 211369.828125 0.0944661073458441 6 -0.4921188354492187 18 Unmodified _VTLVGRPTL_ REV__ENSG00000063176|ENST00000245222|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-2|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-3|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-4|SPHK2;REV__nc|ENSG00000063176|Q9NRA0-5|SPHK2 20.453626601364224 0.2830276176381075 3 {[TV]|[{I|L}S]}{I|L} 3 -1 22.932 0.0 0.0 2.4023 0.0 0.0 0.0 638.3629767051243 638.3629767051243 1.4916623986031396 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L} 2.4023 + + 100 1 1.209 40802.1 1.0 9939 5607 15530 HBL1_DMSO_200M_050219_1,15548 HBL1_DMSO_200M_050219_1,15548,VTLVGRPTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15549 76.026 428.0 93401.0 25 0 4612.7 -1 0 94 697.0598632693291 0 697.0598632693291 PEAK CID FTMS 0 0 0 -1 0 19 3 {I|L} 1 -1 6.9897 0.0 0.0 0.5021 0.0 0.0 695.6870960681518 580.3189791315061 1276.006075199658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.5021 - 17 + 1 1.209 41342.2 1.0 9940 5607 15530 HBL1_DMSO_200M_050219_1,15549 HBL1_DMSO_200M_050219_1,15549, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15550 76.038 706.0 478590.0 25 0 46725.0 36498 TAEEHPVL 8 263 448.2287275042556 0 448.2284423708916 PEAK CID FTMS 0 0 0 15530 185420.625 1.0 0 0.0 20 Unmodified _TAEEHPVL_ ENST00000403258.1_1_6:88986231-88986483:-|nuORF 20.871210003555333 0.4015059659087983 3 VK{I|L}{I|L} 4 7 8.2762 0.0 0.0 0.92529 0.0 0.0 287.03684846378616 151.05169092349846 438.08853938728464 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VK{I|L}{I|L} 0.92529 - 74 + 1 1.209 256756.2 1.0 9941 5607 15530 HBL1_DMSO_200M_050219_1,15550 HBL1_DMSO_200M_050219_1,15550,TAEEHPVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15552 76.049 526.0 77744.0 25 0 15160.0 -1 0 37 1163.126427477746 3486.357453033438 3 1163.794238269329 MULTI CID FTMS 0 0 0 -1 0 1 3 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.15731 0.0 0.0 2000.684431648475 1335.5861394977574 3336.270571146232 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.15731 - 4 + 1 1.209 41566.7 1.0 9942 5608 15551 HBL1_DMSO_200M_050219_1,15552 HBL1_DMSO_200M_050219_1,15552, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15553 76.051 22.0 1812700.0 25 0 267660.0 + 13308 HKKSFAMITI 10 69 588.33538923541 1174.65622553762 2 588.3355590701103 MULTI CID FTMS 0 0 0 15551 1662044.0 0.5188688272204742 -4 0.2362289428710937 2 Unmodified _HKKSFAMITI_ REV__ENST00000302450.10_1_2:113513680-113513752:-|nuORF 2.9952420565917617 0.7127817445270067 3 A 1 -1 3.0989 0.0 0.0 0.26382 0.0 0.0 476.28123882062624 624.3142794244749 1100.5955182451012 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.26382 + + 2 + 1 1.209 35558.3 1.0 9943 5608 15551 HBL1_DMSO_200M_050219_1,15553 HBL1_DMSO_200M_050219_1,15553,HKKSFAMITI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15554 76.056 327.0 689320.0 25 0 52039.0 + 4388 DAVNLQNYV 9 195 518.2580568423137 1034.5015607514274 2 518.2584106326103 MULTI CID FTMS 0 0 0 15551 553772.3125 1.0 0 0.0 3 Unmodified _DAVNLQNYV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 47.74868867922204 0.0453060283459952 3 {[DA]|[EG]}VN{I|L}QNYV 9 0 + 54.294 0.0 0.0 5.2483 5.2483 56.516 0.0 0.0 0.0 17.41376859772854 8.072420927871988 8.072420927871988 0.0 0 0.5682503180159344 1.5228787452803376 0.0467716608392861 1.2614393726401687 + + {[DA]|[EG]}VN{I|L}QNYV;{[DA]|[EG]}VQVQNYV;{[DA]|[EG]}VN{I|L}QGGYV;{[DA]|[EG]}VN{I|L}[AG]NYV;{[DA]|[EG]}VQV[AG]NYV;{[DA]|[EG]}VQVQGGYV;{[DA]|[EG]}VGG{I|L}QNYV;{[DA]|[EG]}V[AG]VQNYV;{NN|[MP]|[D{I|L}]|[EV]}GN{I|L}QNYV;{NN|[MP]|[D{I|L}]|[EV]}GQVQNYV 5.2483;5.2483;4.3582;4.3582;4.3582;4.3582;3.9902;3.9902;3.565;3.565 +;-;-;-;-;-;-;-;-;- + 2977 1 1.209 175514.3 1.0 9944 5608 15551 HBL1_DMSO_200M_050219_1,15554 HBL1_DMSO_200M_050219_1,15554,DAVNLQNYV True True DAVNLQNYV 76.056463 518.25841063261 3747210.75 15551.0 nc|ENSG00000104517|O95071-2|UBR5;;ENSG00000104517|ENST00000520539|UBR5 5.899336179097493 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15555 76.059 138.0 610640.0 25 0 72284.0 + 31521 RQIDVHIFNAV 11 88 437.91041290144665 1310.70940930454 3 437.9102050662041 MULTI CID FTMS 0 0 0 15551 440536.3125 0.779372932932902 -1 0.0657119750976562 4 Unmodified _RQIDVHIFNAV_ ENSG00000124702|ENST00000326974|KLHDC3;ENST00000244670.12_1_6:42984918-42985899:+|nuORF 17.04857598603903 0.6805168445818576 3 [HV]{I|L}YVH{I|L}{M(Oxidation (M))|F}NAV 11 3 + 57.0 0.0 0.0 4.3488 4.3488 73.945 0.0 0.0 0.0 1.5040238190797697 40.01026800076343 1.5040238190797697 2.218487496163561 0 0.25 0.0 0.0 0.0 [HV]{I|L}YVH{I|L}{M(Oxidation (M))|F}NAV;[H{I|L}]VYVH{I|L}{M(Oxidation (M))|F}NAV;{[{M(Oxidation (M))|F}H]|[RQ]}{NN|[MP]|[D{I|L}]|[EV]}VH{I|L}{M(Oxidation (M))|F}NAV;[KP]{[WT]|[RM]}VH{I|L}{M(Oxidation (M))|F}NAV;[HV]{I|L}YVH{I|L}{M(Oxidation (M))|F}GGAV;[H{I|L}]VYVH{I|L}{M(Oxidation (M))|F}GGAV;{[{M(Oxidation (M))|F}H]|[RQ]}{NN|[MP]|[D{I|L}]|[EV]}VH{I|L}{M(Oxidation (M))|F}GGAV;[KP]{[WT]|[RM]}VH{I|L}{M(Oxidation (M))|F}GGAV;[HV]{I|L}YVH{I|L}{[ES]|[DT]|[{I|L}C]}[KS];[H{I|L}]VYVH{I|L}{[ES]|[DT]|[{I|L}C]}[KS] 4.3488;4.1795;4.1567;4.0223;3.6523;3.4831;3.4602;3.3259;1.3922;1.223 -;-;+;-;-;-;-;-;-;- + 167 1 1.209 77516.6 1.0 9945 5608 15551 HBL1_DMSO_200M_050219_1,15555 HBL1_DMSO_200M_050219_1,15555,RQIDVHIFNAV False True RQIDVHIFNAV 76.05925 437.9115 4828579.0 15551.0 ENST00000244670.12_1_6:42984918-42985899:+|nuORF;;ENSG00000124702|ENST00000326974|KLHDC3 7.933361212412517 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15556 76.065 327.0 634580.0 25 0 59958.0 33310 SFTVKWLRR 9 165 596.8488934234282 1191.6832339136563 2 596.8483764529228 MULTI CID FTMS 0 0 0 15551 441406.5 0.2581216255984581 -8 0.5384292602539062 5 Unmodified _SFTVKWLRR_ nc|ENSG00000259024|Q96ET8|TVP23C 7.289230182591677 0.6602208344931196 3 {M(Oxidation (M))|F} 1 8 10.181 0.0 0.0 0.85434 0.0 0.0 1026.6038404583812 0.0 1026.6038404583812 0.0 0.911701041663413 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.85434 + + 342 + 1 1.209 153104.0 1.0 9946 5608 15551 HBL1_DMSO_200M_050219_1,15556 HBL1_DMSO_200M_050219_1,15556,SFTVKWLRR False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15557 76.073 423.0 485340.0 25 0 64608.0 + 2804 ATVPGLLKV 9 172 449.2918052428793 896.5690575525587 2 449.2919189333916 MULTI CID FTMS 0 0 0 15551 433993.4375 0.1902548950003962 -4 0.2362289428710937 6 Unmodified _ATVPGLLKV_ ENSG00000179820|ENST00000391770|MYADM 37.97399986684836 0.0865783450051559 3 [TA]VPG{I|L}{I|L}KV 9 0 + 43.937 0.0 0.0 4.9005 4.9005 83.094 0.0 0.0 0.0 13.762046044021702 10.035862853961476 10.035862853961476 9.050244867691426 0 0.3807196863200844 1.3979400086720375 0.0 0.2887254899964357 + + [TA]VPG{I|L}{I|L}KV;[TA]VV[PA]{I|L}KV 4.9005;3.8911 +;- + 272 + 1 1.209 157768.0 1.0 9947 5608 15551 HBL1_DMSO_200M_050219_1,15557 HBL1_DMSO_200M_050219_1,15557,ATVPGLLKV True True ATVPGLLKV 76.072729 449.291918933392 29294118.0 15551.0 ENSG00000179820|ENST00000391770|MYADM 7.317564328511556 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15558 76.076 165.0 551260.0 25 0 59307.0 21406 LPGILNDTL 9 125 478.27677626559415 954.5389995979884 2 478.2786437869072 MULTI CID FTMS 0 0 0 15551 276111.84375 0.1895645574452173 -8 0.5384292602539062 7 Unmodified _LPGILNDTL_ ENSG00000157119|ENST00000287777|KLHL40;nc|ENSG00000157119|Q2TBA0-2|KLHL40 23.1484247019978 0.2366544122328345 3 [PG]{I|L}ET[KP]T{I|L} 9 5 + 27.628 0.0 0.0 2.8944 2.8944 79.777 0.0 0.0 0.0 9.669169327517729 5.081881825019824 5.081881825019824 10.24227503252014 0 0.0 0.0 0.6747425010840047 0.0 [PG]{I|L}ET[KP]T{I|L};[PG]{I|L}ETT[KP]{I|L};[{I|L}T][QP]A{I|L}V[DV];[VP]S[VG]A{I|L}V[DV];[{I|L}P][QT]A{I|L}V[DV];{[TV]|[{I|L}S]}{I|L}[QP][{I|L}A][DV];[VS]P[VG]A{I|L}V[DV];{[VA]|[{I|L}G]}A[TP]A{I|L}V[DV] 2.8944;1.8214;1.2293;0.89464;0.89464;0.85387;0.3962;0.050067 -;-;-;-;-;-;-;- 744 + 1 1.209 71807.0 1.0 9948 5608 15551 HBL1_DMSO_200M_050219_1,15558 HBL1_DMSO_200M_050219_1,15558,LPGILNDTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15559 76.083 388.0 256710.0 25 0 10377.0 -1 0 115 881.413061892792 1760.811570852384 2 881.9144775271416 MULTI CID FTMS 0 0 0 15551 222417.8125 0.1720823155287403 -4 0.2362289428710937 8 3 EY{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 13 -1 88.39 0.0 0.0 5.0198 0.0 0.0 229.168944975234 0.0 229.168944975234 0.0 72.6322600165243 0.0 0.0 0 0.5752574989159953 0.0 0.0 1.8193415193665468 EY{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 5.0198 - 4768 + 1 1.209 71850.4 1.0 9949 5608 15551 HBL1_DMSO_200M_050219_1,15559 HBL1_DMSO_200M_050219_1,15559, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15560 76.09 392.0 493790.0 25 0 56338.0 19867 LHLWLKVLFS 10 166 628.3813604498445 1254.7481679664888 2 628.3835937380791 MULTI CID FTMS 0 0 0 15551 229398.15625 0.1019452665285757 -7 0.5010452270507812 9 Unmodified _LHLWLKVLFS_ ENST00000495790.1_1_10:32573515-32573971:-|nuORF 10.823927491677226 0.6659270209832991 3 [TP]{I|L}EA 5 9 32.107 0.0 0.0 2.5588 0.0 0.0 0.0 740.4600569647888 740.4600569647888 8.20059305946345 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.394599018282542 0.0 [TP]{I|L}EA 2.5588 - 775 1 1.209 143853.0 1.0 9950 5608 15551 HBL1_DMSO_200M_050219_1,15560 HBL1_DMSO_200M_050219_1,15560,LHLWLKVLFS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15561 76.097 408.0 386360.0 25 0 49285.0 -1 0 128 865.4434457796298 0 865.4442626833916 PEAK CID FTMS 0 0 0 15551 184183.90625 0.9289744656282988 6 -0.4687652587890625 10 3 {I|L}K{I|L}AE 5 -1 43.756 0.0 0.0 2.5309 0.0 0.0 863.3420784715657 308.16340051822505 1171.5054789897908 0.0 0.0 0.0 0.0 0 0.0 0.0 1.579689690656103 0.3494850021680094 {I|L}K{I|L}AE 2.5309 - 1136 + 1 1.209 107368.6 1.0 9951 5608 15551 HBL1_DMSO_200M_050219_1,15561 HBL1_DMSO_200M_050219_1,15561, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15563 76.101 2.0 23277000.0 25 0 1836300.0 + 22433 KILPTLEAV 9 73 492.31086945161263 982.6071859700252 2 492.3110534548759 MULTI CID FTMS 0 0 0 15562 25533918.0 1.0 0 0.0 1 Unmodified _LPTLEKLVA_ ENSG00000143621|ENST00000361891|ILF2 26.88365393820708 0.1891292719743517 3 [{I|L}P]T{I|L}K{I|L}EAV 9 3 + 55.217 0.0 0.0 5.6194 5.6194 88.818 0.0 0.0 0.0 14.690287068896026 32.769790682657245 14.690287068896026 15.898255349109498 0 0.8935078169319297 1.5228787452803376 0.7742275032520141 0.0 [{I|L}P]T{I|L}K{I|L}EAV;[TP]{I|L}{I|L}K{I|L}EAV;[{I|L}P]TE{I|L}[K{I|L}]AV;[{I|L}P]T{I|L}E[K{I|L}]AV;[TP]{I|L}E{I|L}[K{I|L}]AV;[TP]{I|L}{I|L}E[K{I|L}]AV;{[QN]|[E{I|L}]|[KN]}[TP]{I|L}[K{I|L}]AV 5.6194;4.0015;3.5853;2.9726;1.9673;1.3546;0.86982 -;-;-;-;-;-;- 229 1 1.209 43171.8 1.0 9952 5609 15562 HBL1_DMSO_200M_050219_1,15563 HBL1_DMSO_200M_050219_1,15563,LPTLEKLVA False False KILPTLEAV 76.101471 492.311053454876 190796960.0 15562.0 ENSG00000143621|ENST00000361891|ILF2 5.787277539571126 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15564 76.103 6.6 6210300.0 25 0 813730.0 + 16373 IYQEKVLDL 9 71 560.8168714373286 1119.619189941457 2 560.8165771365166 MULTI CID FTMS 0 0 0 15562 7144581.0 0.4940936270009891 2 -0.1552352905273437 2 Unmodified _IYQEKVLDL_ ENSG00000079616|ENST00000160827|KIF22;nc|ENSG00000079616|Q14807-2|KIF22 51.629811660486645 0.0367964933207742 3 {NN|[MP]|[D{I|L}]|[EV]}KQ{I|L}D{I|L}Y{I|L} 9 6 + 72.106 0.0 0.0 6.4402 6.4402 79.194 0.0 0.0 0.0 22.21848749616356 16.478174818886373 16.478174818886373 1.249387366082999 0 0.3252574989159953 1.5228787452803376 0.7059771852360797 1.274227503252014 {NN|[MP]|[D{I|L}]|[EV]}KQ{I|L}D{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQ{I|L}DY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQY{I|L}D{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQ{I|L}YD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]{I|L}D{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]{I|L}DY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]Y{I|L}D{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]{I|L}YD{I|L}{I|L};{[TV]|[{I|L}S]}[VG]Q{I|L}D{I|L}Y{I|L};{[TV]|[{I|L}S]}[VG]Q{I|L}DY{I|L}{I|L} 6.4402;6.3286;6.1532;5.9948;5.6178;5.5062;5.3308;5.1724;4.4557;4.3442 -;-;-;-;-;-;-;-;-;- 380 1 1.209 36976.7 1.0 9953 5609 15562 HBL1_DMSO_200M_050219_1,15564 HBL1_DMSO_200M_050219_1,15564,IYQEKVLDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15565 76.104 15.0 1106500.0 25 0 96309.0 17343 KLWNKYRIS 9 45 604.3483545669761 1206.6821562007522 2 604.3487426638603 MULTI CID FTMS 0 0 0 15562 3418849.25 0.8421564960311102 -3 0.1969451904296875 3 Unmodified _KLWNKYRIS_ ENSG00000167693|ENST00000336868|NXN;ENST00000575171.1_1_17:729096-882585:-|nuORF;ENST00000575455.5_1_17:722628-800182:-|nuORF;nc|ENSG00000167693|Q6DKJ4-2|NXN;nc|ENSG00000167693|Q6DKJ4-3|NXN 2.059750862983233 0.8427793054688888 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.209 20370.4 1.0 9954 5609 15562 HBL1_DMSO_200M_050219_1,15565 HBL1_DMSO_200M_050219_1,15565,KLWNKYRIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15566 76.105 19.0 1131000.0 25 0 90519.0 + + -1 RVTGGIFSV 9 47 468.2691767607116 934.5238005882233 2 468.2692748904228 MULTI CID FTMS 0 0 0 15562 3023827.0 1.0 0 0.0 4 Oxidation (M) _M(Oxidation (M))LIPLFSV_ ENSG00000151135|ENST00000280756|TMEM263 15.768221252438446 0.6779680726941459 3 {I|L}{M(Oxidation (M))|F}SV 4 -1 19.865 0.0 0.0 2.1257 0.0 0.0 470.2610035626969 0.0 470.2610035626969 0.0 7.390690719683093 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}SV 2.1257 + + 22 1 1.209 23741.9 1.0 9955 5609 15562 HBL1_DMSO_200M_050219_1,15566 HBL1_DMSO_200M_050219_1,15566,MLIPLFSV False False RVTGGIFSV 76.105008 468.269274890423 26977252.0 15562.0 ENSG00000151135|ENST00000280756|TMEM263 5.42165486017863 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15567 76.106 13.0 2823800.0 25 0 310540.0 + 39780 VEPRTLLSV 9 67 507.3029422787176 1012.5913316242352 2 507.3036376833916 MULTI CID FTMS 0 0 0 15562 2426575.0 1.0 0 0.0 5 Unmodified _VEPRTLLSV_ REV__ENSG00000114841|ENST00000420323|DNAH1;REV__ENST00000486752.5_1_3:52350520-52422757:+|nuORF;REV__ENST00000497875.1_1_3:52356446-52387784:+|nuORF;REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1;REV__nc|ENSG00000114841|Q9P2D7-6|DNAH1;REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1 18.1463463914782 0.3454829746528889 3 [VS]{I|L}[WP]{I|L}{I|L}[VS] 9 -1 + 30.072 0.0 0.0 2.9698 2.9698 74.955 0.0 0.0 0.0 0.3790999629741556 12.1669877129645 0.3790999629741556 5.440228147639203 0 0.5 1.3979400086720375 0.0 0.0 [VS]{I|L}[WP]{I|L}{I|L}[VS];[VS]{I|L}[WP]{I|L}S{I|L}V;{[TV]|[{I|L}S]}V[WP]{I|L}{I|L}[VS];{[TV]|[{I|L}S]}V[WP]{I|L}S{I|L}V;[NP]{I|L}PT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}V;[NP]{I|L}PYVV{I|L}V;[NP]{I|L}P{I|L}[{M(Oxidation (M))|F}T]{I|L}V 2.9698;2.4325;1.7126;1.1754;1.1248;0.74886;0.53027 -;-;-;-;-;-;- 128 1 1.209 34841.1 1.0 9956 5609 15562 HBL1_DMSO_200M_050219_1,15567 HBL1_DMSO_200M_050219_1,15567,VEPRTLLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15568 76.107 19.0 1905000.0 25 0 190140.0 28412 PSTGTLPPSL 10 58 485.2659545631073 968.5173561930146 2 485.2666198611259 MULTI CID FTMS 0 0 0 15562 2384002.75 1.0 0 0.0 6 Unmodified _PSTGTLPPSL_ ENSG00000060749|ENST00000650167|QSER1;nc|ENSG00000060749|Q2KHR3-2|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1 43.85829265575387 0.1168243637355526 3 {[QS]|[NT]}VEP{I|L} 6 7 33.377 0.0 0.0 3.4462 0.0 0.0 0.0 312.1537447030334 312.1537447030334 8.098943791441968 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 {[QS]|[NT]}VEP{I|L} 3.4462 - 169 1 1.209 33143.6 1.0 9957 5609 15562 HBL1_DMSO_200M_050219_1,15568 HBL1_DMSO_200M_050219_1,15568,PSTGTLPPSL True False SQVEPLPSL 76.107365 485.266619861126 18296376.0 15562.0 ENSG00000160294|ENST00000291688|MCM3AP 4.288710117340088 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15569 76.109 30.0 1456800.0 25 0 223460.0 + 4394 DAVQLNVI 8 68 436.2477972342146 870.4810415352292 2 436.2478210330009 MULTI CID FTMS 0 0 0 15562 1998571.125 0.8522458768715907 1 -0.0664596557617187 7 Unmodified _DAVQLNVI_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 28.486842064014134 0.4448922141344407 3 {[DA]|[EG]}VQ{I|L} 5 3 35.29 0.0 0.0 4.0541 0.0 0.0 0.0 341.17999108040425 341.17999108040425 13.60801848024778 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.2614393726401688 0.0 + {[DA]|[EG]}VQ{I|L} 4.0541 + + 81 1 1.209 40013.5 1.0 9958 5609 15562 HBL1_DMSO_200M_050219_1,15569 HBL1_DMSO_200M_050219_1,15569,DAVQLNVI False True DAVQLNVI 76.108544 436.247821033001 16076348.0 15562.0 ENST00000524933.1_1_11:13716477-13732426:+|nuORF;;ENSG00000197601|ENST00000354817|FAR1 2.4332003593444824 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15570 76.11 34.0 1300900.0 25 0 289190.0 + 17421 KMYEEFLSKV 10 75 637.3283771053601 1272.64220127752 2 637.3286010622978 MULTI CID FTMS 0 0 0 15562 1652569.5 0.3812737074788105 2 -0.1552352905273437 8 Unmodified _KMYEEFLSKV_ ENSG00000108946|ENST00000589228|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;nc|ENSG00000108946|P10644-2|PRKAR1A 26.64355601635755 0.3700653758071189 3 KMYEE{M(Oxidation (M))|F}{I|L}SKV 10 0 + 73.287 0.0 0.0 5.7586 5.7586 90.4 0.0 0.0 0.0 63.009182235504525 7.887871618143976 7.887871618143976 26.80523450795789 0 3.353917193908117 0.0 0.0 0.0 + + KMYEE{M(Oxidation (M))|F}{I|L}SKV;V[WH]EE{M(Oxidation (M))|F}{I|L}SKV 5.7586;3.6524 +;- + 117 + 1 1.209 40762.7 1.0 9959 5609 15562 HBL1_DMSO_200M_050219_1,15570 HBL1_DMSO_200M_050219_1,15570,KMYEEFLSKV False True KMYEEFLSKV 76.109723 637.328601062298 55545052.5 15562.0 ENSG00000188191|ENST00000537384|PRKAR1B;;ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 7.926440715789795 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15571 76.111 25.0 1962500.0 25 0 157190.0 + + 39933 RQLNEVLSI 9 94 536.3115328130019 1070.6085126928035 2 536.3112060427666 MULTI CID FTMS 0 0 0 15562 1156930.75 1.0 0 0.0 9 Unmodified _VFTVGHVLLS_ ENST00000527431.1_1_11:9406310-9430044:+|nuORF 15.738622578938676 0.5834632108994704 3 {[TV]|[{I|L}S]}[RN]{I|L}Q{I|L}D{I|L} 9 -1 + 49.178 0.0 0.0 4.5935 4.5935 82.994 0.0 0.0 0.0 5.352124803540619 10.06044340753462 5.352124803540619 9.208187539523747 0 0.3252574989159953 1.2218487496163564 0.2614393726401688 0.0 {[TV]|[{I|L}S]}[RN]{I|L}Q{I|L}D{I|L};{[TV]|[{I|L}S]}[RN]{I|L}[AG]{I|L}D{I|L};[{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}Q{I|L}D{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}H]|[RQ]}EV{I|L}S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}P]{I|L}Q{I|L}D{I|L};[{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[AG]{I|L}D{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}P]{I|L}[AG]{I|L}D{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}H]|[RQ]}{[TV]|[{I|L}S]}{I|L}D{I|L} 4.5935;3.7334;3.5472;3.3724;2.8643;2.6871;2.0042;0.87275 -;-;-;-;-;-;-;- 205 1 1.209 47547.6 1.0 9960 5609 15562 HBL1_DMSO_200M_050219_1,15571 HBL1_DMSO_200M_050219_1,15571,VFTVGHVLLS False False RQLNEVLSI 76.110902 536.311206042767 7914186.0 15562.0 ENST00000527431.1_1_11:9406310-9430044:+|nuORF 1.681817313035329 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15572 76.112 29.0 1677300.0 25 0 180190.0 8142 EPLKKCIL 8 81 472.287993149045 942.56143336489 2 472.2879211306572 MULTI CID FTMS 0 0 0 15562 1066025.25 0.0704662301565582 12 -0.9847640991210938 10 Unmodified _EPLKKCIL_ ENSG00000163319|ENST00000295491|MRPS18C;ENST00000512375.1_1_4:84379507-84379660:+|nuORF 9.347437153973935 0.7675937258251505 3 [EP]{I|L} 3 5 19.41 0.0 0.0 2.0593 0.0 0.0 0.0 600.358039160065 600.358039160065 5.430599746173222 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 + [EP]{I|L} 2.0593 + + 36 1 1.209 43846.9 1.0 9961 5609 15562 HBL1_DMSO_200M_050219_1,15572 HBL1_DMSO_200M_050219_1,15572,EPLKKCIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15573 76.114 60.0 867440.0 25 0 84456.0 + -1 MTVLPQYGMA 10 79 563.7684120168806 1125.522271100561 2 563.7689086794853 MULTI CID FTMS 0 0 0 15562 984399.0625 0.8744053217616344 -1 0.0591888427734375 11 Oxidation (M) _MTVLPQYGM(Oxidation (M))A_ REV__ENSG00000147383|ENST00000370274|NSDHL 14.838274106304384 0.5985701837916485 3 [MT]VSMKVMEA 10 -1 + 55.212 0.0 0.0 4.9054 4.9054 79.027 0.0 0.0 0.0 4.472149186170867 4.472149186170867 4.472149186170867 4.472149186170867 0 1.1549471895720984 1.5228787452803376 0.5 0.0 [MT]VSMKVMEA;[MT]{[ES]|[DT]|[{I|L}C]}KMS{I|L}EA;[MT]{[ES]|[DT]|[{I|L}C]}KVTMEA;[MT][KC]{I|L}MS{I|L}EA;[MT]{[ES]|[DT]|[{I|L}C]}KEVT{[DS]|[MA]|[CV]|TT};[MT]{[MS]|[{M(Oxidation (M))|F}A]}VKVMEA;[MT][KC]{I|L}VTMEA;[MT]{[ES]|[DT]|[{I|L}C]}KVET{[DS]|[MA]|[CV]|TT};[MT]{[ES]|[DT]|[{I|L}C]}KMSV[DV];[MT]{[ES]|[DT]|[{I|L}C]}EKVT{[DS]|[MA]|[CV]|TT} 4.9054;4.5081;4.2406;3.8167;3.6787;3.6634;3.5492;3.4113;3.295;3.2548 -;-;-;-;-;-;-;-;-;- 505 + 1 1.209 46820.4 1.0 9962 5609 15562 HBL1_DMSO_200M_050219_1,15573 HBL1_DMSO_200M_050219_1,15573,MTVLPQYGMA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15574 76.115 40.0 1097800.0 25 0 74567.0 -1 NMYFIGNML 9 85 567.751244185203 1133.4879354372058 2 567.7515746951103 MULTI CID FTMS 0 0 0 15562 956431.625 0.5077848882182829 2 -0.1552352905273437 12 2 Oxidation (M) _NM(Oxidation (M))YFIGNM(Oxidation (M))L_ nc|ENSG00000174233|O43306-2|ADCY6 10.823927491677226 0.5436922275383211 3 A{I|L} 2 -1 25.969 0.0 0.0 2.2911 0.0 0.0 931.3553956196262 0.0 931.3553956196262 0.0 15.511525224473813 0.0 0.0 0 0.5 0.0 0.0 0.0 A{I|L} 2.2911 - 70 + 1 1.209 40105.2 1.0 9963 5609 15562 HBL1_DMSO_200M_050219_1,15574 HBL1_DMSO_200M_050219_1,15574,NMYFIGNML False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15575 76.119 240.0 600630.0 25 0 102030.0 19427 LEVPLDPKLLE 11 141 633.3694136787589 1264.7242744243176 2 633.3690673708916 MULTI CID FTMS 0 0 0 15562 868334.5625 0.567772347259102 6 -0.5669403076171875 13 Unmodified _LEVPLDPKLLE_ ENSG00000091129|ENST00000379028|NRCAM;nc|ENSG00000091129|Q92823-2|NRCAM;nc|ENSG00000091129|Q92823-3|NRCAM;nc|ENSG00000091129|Q92823-5|NRCAM;nc|ENSG00000091129|Q92823-6|NRCAM 8.745405648335112 0.8338865417133445 3 {[QN]|[E{I|L}]|[KN]}ME{I|L} 5 8 33.94 0.0 0.0 2.6836 0.0 0.0 0.0 646.4035706491801 646.4035706491801 23.94016261540408 0.0 0.0 0.0 0 0.0 1.0 0.9247425010840048 0.0 {[QN]|[E{I|L}]|[KN]}ME{I|L} 2.6836 - 296 1 1.209 114664.3 1.0 9964 5609 15562 HBL1_DMSO_200M_050219_1,15575 HBL1_DMSO_200M_050219_1,15575,LEVPLDPKLLE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15576 76.122 121.0 581970.0 25 0 48484.0 + 28578 PTSVGLQLP 9 101 456.2632633386199 910.5119737440398 2 456.2633239626884 MULTI CID FTMS 0 0 0 15562 632042.3125 0.9248377298290136 1 -0.0664596557617187 14 Unmodified _PTSVGLQLP_ ENSG00000256463|ENST00000537592|SALL3;nc|ENSG00000256463|Q9BXA9-2|SALL3;nc|ENSG00000256463|Q9BXA9-3|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3 42.09456458481378 0.0639583784996157 3 {[VA]|[{I|L}G]}DVPQ 6 7 42.814 0.0 0.0 4.7022 0.0 0.0 0.0 298.17643842593355 298.17643842593355 26.82786981123199 0.0 0.0 0.0 0 0.0 2.0 1.5189301784845295 0.0 {[VA]|[{I|L}G]}DVPQ 4.7022 - 339 1 1.209 63345.1 1.0 9965 5609 15562 HBL1_DMSO_200M_050219_1,15576 HBL1_DMSO_200M_050219_1,15576,PTSVGLQLP True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15577 76.124 102.0 590740.0 25 0 100100.0 + 24275 MAPRTLLL 8 89 457.7781512369343 913.5417495406684 2 457.7788879275322 MULTI CID FTMS 0 0 0 15562 594416.625 0.0626129521760605 8 -0.67840576171875 15 Unmodified _MAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206341|P01893|HLA-H;nc|ENSG00000206503|P04439-2|HLA-A 29.081581746732265 0.4323690340403521 3 MA 2 6 42.206 0.0 0.0 4.6201 0.0 0.0 0.0 708.4426929394373 708.4426929394373 13.494850021680094 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + MA 4.6201 + + 102 + 1 1.209 51613.0 1.0 9966 5609 15562 HBL1_DMSO_200M_050219_1,15577 HBL1_DMSO_200M_050219_1,15577,MAPRTLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15578 76.131 392.0 634310.0 25 0 85808.0 21656 LPLKLSHV 8 130 453.7921119878436 905.5696710424872 2 453.7921630740166 MULTI CID FTMS 0 0 0 15562 524023.78125 0.0081817271049754 41 -3.2216949462890625 16 Unmodified _LPLKLSHV_ ENSG00000173621|ENST00000309602|LRFN4 36.04419817259434 0.3004715606373109 3 {I|L}PPP 4 6 57.097 0.0 0.0 6.3051 0.0 0.0 0.0 498.30488001041255 498.30488001041255 23.94573619305504 0.0 0.0 0.0 0 0.9049471895720984 2.0 0.0 0.0 {I|L}PPP 6.3051 - 971 + 1 1.209 194769.5 1.0 9967 5609 15562 HBL1_DMSO_200M_050219_1,15578 HBL1_DMSO_200M_050219_1,15578,LPLKLSHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15579 76.137 355.0 267190.0 25 0 20756.0 + 16573 KDILQVLTSF 10 131 582.3353301673142 1162.6561074014282 2 582.3353759646416 MULTI CID FTMS 0 0 0 15562 412395.84375 0.0786238333565928 19 -1.435455322265625 17 Unmodified _KDILQVLTSF_ REV__ENSG00000160007|ENST00000672722|ARHGAP35 6.2057823575117 0.6979311171683138 3 {[ES]|[DT]|[{I|L}C]}{I|L}HD{[CA]|SS}VY 9 -1 24.615 0.0 0.0 2.1172 0.0 0.0 0.0 142.1778718880095 142.1778718880095 11.023461980423452 0.0 0.0 0.0 0 0.0 0.0 0.5283773187068795 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}HD{[CA]|SS}VY 2.1172 - 1122 1 1.209 75110.3 1.0 9968 5609 15562 HBL1_DMSO_200M_050219_1,15579 HBL1_DMSO_200M_050219_1,15579,KDILQVLTSF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15580 76.147 564.0 591880.0 25 0 28825.0 + 31562 RQLGSKYILGI 11 240 416.5872241950393 1246.739843185318 3 416.5870849490166 MULTI CID FTMS 0 0 0 15562 305422.59375 0.9707049127574372 -1 0.0591888427734375 18 Unmodified _RQLGSKYILGI_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 30.354368406336206 0.3794727900792232 3 [Y{I|L}][HK]KGY{I|L}{I|L}{I|L} 10 6 + 30.947 0.0 0.0 2.4822 2.4822 72.506 0.0 0.0 0.0 5.633869788643931 6.422042885466084 5.633869788643931 3.979400086720375 0 0.2742275032520141 2.0 0.0 0.0 [Y{I|L}][HK]KGY{I|L}{I|L}{I|L};[Y{I|L}][HK]KG{I|L}Y{I|L}{I|L};{I|L}{I|L}[WE]KY{I|L}G{I|L}{I|L};[Y{I|L}][HK]KY{I|L}G{I|L}{I|L};{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}SKY{I|L}G{I|L}{I|L};{I|L}{I|L}[WE]KGY{I|L}{I|L}{I|L};[Y{I|L}][HK]K{I|L}YG{I|L}{I|L};{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}SK{I|L}{M(Oxidation (M))|F}{I|L}W;[Y{I|L}][HK]KYG{I|L}{I|L}{I|L};{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}SKGY{I|L}{I|L}{I|L} 2.4822;2.163;2.0303;1.9583;1.9336;1.9333;1.9046;1.8673;1.8581;1.8365 -;-;-;-;-;-;-;-;-;- 1802 1 1.209 278249.2 1.0 9969 5609 15562 HBL1_DMSO_200M_050219_1,15580 HBL1_DMSO_200M_050219_1,15580,RQLGSKYILGI False True RQLGSKYILGI 76.147244 416.587084949017 2740304.0 15562.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 5.090704917907715 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15581 76.154 395.0 86515.0 25 0 8001.3 + -1 INRMENKMHFV 11 77 725.8527709841728 0 725.8527709841728 PEAK CID FTMS 0 0 0 -1 0 19 2 Oxidation (M) _INRM(Oxidation (M))ENKM(Oxidation (M))HFV_ REV__ENSG00000153237|ENST00000283233|CCDC148;REV__nc|ENSG00000153237|Q8NFR7-3|CCDC148 3.2813086475875832 0.4761840153648598 3 A 1 -1 3.4949 0.0 0.0 0.24108 0.0 0.0 1151.5271839587767 224.10357080631096 1375.6307547650877 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.24108 - 14 + 1 1.209 32696.1 1.0 9970 5609 15562 HBL1_DMSO_200M_050219_1,15581 HBL1_DMSO_200M_050219_1,15581,INRMENKMHFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15582 76.164 536.0 150110.0 25 0 40855.0 -1 0 37 1170.8191208057658 3509.4355330174976 3 1171.155322253704 MULTI CID FTMS 0 0 0 15562 211441.4375 0.5421771685961703 -3 0.1969451904296875 20 3 E 1 -1 6.9897 0.0 0.0 0.19917 0.0 0.0 2853.2063008580662 524.1628512018186 3377.369152059885 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19917 - 4 + 1 1.209 71961.8 1.0 9971 5609 15562 HBL1_DMSO_200M_050219_1,15582 HBL1_DMSO_200M_050219_1,15582, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15584 76.169 67.0 780370.0 25 0 124430.0 14419 IFLKRMPSI 9 73 368.8906659814351 1103.6501685445053 3 368.8906432986259 MULTI CID FTMS 0 0 0 15583 498017.71875 0.3316791659364962 2 -0.1328125 1 Unmodified _IFLKRMPSI_ ENSG00000143839|ENST00000272190|REN;nc|ENSG00000143839|P00797-2|REN 23.78978130925829 0.2284941198415988 3 {I|L}{I|L}E 3 7 27.945 0.0 0.0 2.5321 0.0 0.0 730.413167394509 0.0 730.413167394509 0.0 13.50833760139686 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {I|L}{I|L}E 2.5321 - 41 1 1.199 50685.1 1.0 9972 5610 15583 HBL1_DMSO_200M_050219_1,15584 HBL1_DMSO_200M_050219_1,15584,IFLKRMPSI False True FLPRKFPSL 76.16861 368.890643298626 20399790.0 15583.0 nc|ENSG00000261236|Q14137-2|BOP1;;ENSG00000261236|ENST00000569669|BOP1 0.9097248564163845 3.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15585 76.174 321.0 743770.0 25 0 116060.0 -1 0 191 323.20954951581393 644.4045460984279 2 323.2092468142509 MULTI CID FTMS 0 0 0 15583 356530.8125 0.3302844299866786 3 -0.3007583618164062 2 3 {I|L}M{I|L}{I|L}R 5 -1 + 58.07 0.0 0.0 9.0114 9.0114 89.295 0.0 0.0 0.0 33.01029995663981 4.306638534806616 4.306638534806616 4.306638534806616 0 0.2887254899964357 1.6989700043360187 0.0 0.6861818737241735 {I|L}M{I|L}{I|L}R;{I|L}M{I|L}R{I|L};{I|L}{I|L}M{I|L}R;{I|L}{I|L}MR{I|L} 9.0114;8.3431;5.4136;4.7453 -;-;-;- 69 + 1 1.199 191338.1 1.0 9973 5610 15583 HBL1_DMSO_200M_050219_1,15585 HBL1_DMSO_200M_050219_1,15585, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15586 76.176 12.0 2832900.0 25 0 247840.0 + 22596 LPYGLERAI 9 59 516.2964678080378 1030.5783826828756 2 516.2971679568291 MULTI CID FTMS 0 0 0 15583 2328017.0 0.9157560719779804 -2 0.1256484985351562 3 Unmodified _LPYGLERAI_ ENSG00000004478|ENST00000001008|FKBP4 16.149105407346934 0.3995459350917656 3 {I|L}PY{[VA]|[{I|L}G]}E{I|L}N{I|L} 9 2 + 53.663 0.0 0.0 5.207 5.207 82.137 0.0 0.0 0.0 40.89829944652951 4.449237304209888 4.449237304209888 6.478174818886373 0 0.6549471895720985 1.6989700043360187 0.0 0.0 {I|L}PY{[VA]|[{I|L}G]}E{I|L}N{I|L};{I|L}PY[W{I|L}]{I|L}N{I|L} 5.207;4.5784 -;- 33 + 1 1.199 36299.4 1.0 9974 5610 15583 HBL1_DMSO_200M_050219_1,15586 HBL1_DMSO_200M_050219_1,15586,LPYGLERAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15587 76.177 38.0 1036400.0 25 0 148280.0 + 43695 YAYDGKDYLAL 11 61 646.3138268588649 1290.6131007845297 2 646.3140136599541 MULTI CID FTMS 0 0 0 15583 885032.375 0.1784934863857309 -2 0.1256484985351562 4 Unmodified _YAYDGKDYLAL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 24.881564428377168 0.5079759154518888 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}[{I|L}A] 11 5 + 59.028 0.0 0.0 4.5737 4.5737 54.238 0.0 0.0 0.0 13.132422953296905 51.0693324133889 13.132422953296905 0.0 0 0.8807196863200843 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DY{I|L}AY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}Y[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAYA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}YAY[{I|L}A];[KG]DYDYAY{I|L}[{I|L}A];[KG]DYDY{I|L}AY[{I|L}A];[KG]DYDYA{I|L}Y[{I|L}A];[KG]DYDYAYA{I|L}{I|L};[KG]DYD{I|L}YAY[{I|L}A] 4.5737;4.5737;4.3404;4.1422;4.0321;3.4346;3.4346;3.2014;3.0032;2.893 -;-;-;-;-;-;-;-;-;- 221 1 1.199 39330.4 1.0 9975 5610 15583 HBL1_DMSO_200M_050219_1,15587 HBL1_DMSO_200M_050219_1,15587,YAYDGKDYLAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15588 76.178 34.0 1190800.0 25 0 190800.0 + 2558 ASFNDTFVHV 10 65 568.7723329720903 1135.5301130109806 2 568.7726928591728 MULTI CID FTMS 0 0 0 15583 877168.0 0.0337829416880224 -4 0.2634048461914062 5 Unmodified _ASFNDTFVHV_ ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF 37.97399986684836 0.1789611706409123 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ANDT{M(Oxidation (M))|F}V[HV] 10 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A + + 42.791 28.561 9.3601 3.7684 3.7684 51.921 0.0 0.0 0.0 0.0 14.22987415365073 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ANDT{M(Oxidation (M))|F}V[HV] 3.7684 - 72 + 1 1.199 36710.9 1.0 9976 5610 15583 HBL1_DMSO_200M_050219_1,15588 HBL1_DMSO_200M_050219_1,15588,ASFNDTFVHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15589 76.179 48.0 1129700.0 25 0 128620.0 -1 0 84 571.3816287532779 570.3743522866779 1 571.3815795779228 MULTI CID FTMS 0 0 0 15583 632740.25 0.1136869622806809 7 -0.6119461059570312 6 3 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}{I|L} 5 -1 + 50.864 0.0 0.0 8.9177 8.9177 88.781 0.0 0.0 0.0 3.974315640635595 14.515449934959726 3.974315640635595 3.974315640635595 0 0.4666152729074456 1.6989700043360187 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}{I|L};[{I|L}V]N{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V{I|L};[{I|L}V]QV{I|L};[{I|L}V]GG{I|L}{I|L};[VG]AV{I|L}{I|L};[{I|L}V][AG]V{I|L};[VG]A{I|L}V{I|L};[VG]G{I|L}{I|L}{I|L};{[NV]|[RG]}{I|L}{I|L}{I|L} 8.9177;8.2209;7.9091;7.2123;6.5479;6.1305;5.5393;5.1219;4.3047;4.1132 -;-;-;-;-;-;-;-;-;- 91 1 1.199 46838.6 1.0 9977 5610 15583 HBL1_DMSO_200M_050219_1,15589 HBL1_DMSO_200M_050219_1,15589, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15590 76.181 79.0 1559600.0 25 0 212330.0 + 10686 FVVDHVIKI 9 105 357.2183702518315 1068.6332813556946 3 357.2182800173759 MULTI CID FTMS 0 0 0 15583 642854.25 1.0 0 0.0 7 Unmodified _FVVDHVIKI_ ENSG00000090686|ENST00000308271|USP48;ENST00000464577.1_1_1:22028060-22030944:-|nuORF;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48 21.59015148037692 0.2564810811560323 3 [{M(Oxidation (M))|F}V]VDHV{I|L}K{I|L} 9 0 + 33.956 0.0 0.0 3.1775 3.1775 71.563 0.0 0.0 0.0 9.69090928952918 5.332436429218095 5.332436429218095 2.730012720637376 0 0.2215141619232908 0.6575773191777937 0.0 0.2134679910804404 + + [{M(Oxidation (M))|F}V]VDHV{I|L}K{I|L};[{M(Oxidation (M))|F}V]VD{I|L}[HV]K{I|L};[{M(Oxidation (M))|F}V]VDHV{I|L}{I|L}K;[{M(Oxidation (M))|F}V]VD{I|L}[HV]{I|L}K;[{M(Oxidation (M))|F}V]{I|L}[DV][HV]K{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CP]|[EA]}HV{I|L}K{I|L};[{M(Oxidation (M))|F}V]{I|L}[DV][HV]{I|L}K;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CP]|[EA]}{I|L}[HV]K{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CP]|[EA]}HV{I|L}{I|L}K 3.1775;2.9221;2.6684;2.4129;1.0027;0.60027;0.49353;0.3448;0.091147 +;-;-;-;-;-;-;-;- + 200 + 1 1.199 107811.1 1.0 9978 5610 15583 HBL1_DMSO_200M_050219_1,15590 HBL1_DMSO_200M_050219_1,15590,FVVDHVIKI False True FVVDHVIKI 76.18107 357.218280017376 5701118.0 15583.0 nc|ENSG00000090686|Q86UV5-8|USP48;;ENSG00000090686|ENST00000308271|USP48;;ENST00000464577.1_1_1:22028060-22030944:-|nuORF;;nc|ENSG00000090686|Q86UV5-2|USP48;;nc|ENSG00000090686|Q86UV5-5|USP48 3.624884764353434 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15591 76.182 49.0 429670.0 25 0 36941.0 + 21820 LPNNMIYQV 9 49 546.280697653482 1090.546842373764 2 546.2811767458916 MULTI CID FTMS 0 0 0 15583 544795.875 0.929563252967079 -2 0.1256484985351562 8 Unmodified _LPNNMIYQV_ ENSG00000102595|ENST00000376747|UGGT2 4.3292370932331545 0.7635526921153418 3 V 1 8 12.218 0.0 0.0 1.1204 0.0 0.0 973.4673115893874 0.0 973.4673115893874 0.0 -0.4575749056067479 -0.4575749056067479 0.0 0 0.0 0.0 0.0 0.0 + V 1.1204 + + 8 + 1 1.199 23065.6 1.0 9979 5610 15583 HBL1_DMSO_200M_050219_1,15591 HBL1_DMSO_200M_050219_1,15591,LPNNMIYQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15592 76.184 90.0 438640.0 25 0 67628.0 15883 ISREDLLM 8 77 488.7591614411615 975.503769949123 2 488.7609741091728 MULTI CID FTMS 0 0 0 15583 460293.46875 0.0731685090460879 -6 0.36187744140625 9 Unmodified _ISREDLLM_ ENSG00000140057|ENST00000267584|AK7;ENST00000554313.1_1_14:96864549-96887771:+|nuORF;ENST00000556643.1_1_14:96858491-96871207:+|nuORF 19.438996006549623 0.6237395211498085 3 {[TV]|[{I|L}S]}G{[QG]|[NA]}{[SA]|[TG]}{I|L}{I|L}M 10 5 {[TV]|[{I|L}S]}G{[QG]|[NA]}{[SA]|[TG]}{I|L} + + 19.464 8.6498 1.2125 1.9953 1.9953 48.842 0.0 0.0 0.0 0.0 2.212571733902194 0.0 0.0 0 0.0 0.0 0.0 0.0 {[TV]|[{I|L}S]}G{[QG]|[NA]}{[SA]|[TG]}{I|L}{I|L}M 1.9953 - 71 + 1 1.199 35231.8 1.0 9980 5610 15583 HBL1_DMSO_200M_050219_1,15592 HBL1_DMSO_200M_050219_1,15592,ISREDLLM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15593 76.186 84.0 457300.0 25 0 40824.0 + 10603 FVLLPKML 8 70 480.8013543239512 959.5881557147025 2 480.8009521365166 MULTI CID FTMS 0 0 0 15583 411649.0 0.0307192493335999 13 -1.1212921142578125 10 Unmodified _FVLLPKML_ REV__ENSG00000149091|ENST00000456247|DGKZ;REV__ENSG00000157680|ENST00000614521|DGKI;REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF;REV__ENST00000531879.5_1_11:46367016-46400221:+|nuORF;REV__nc|ENSG00000149091|Q13574-1|DGKZ;REV__nc|ENSG00000149091|Q13574-3|DGKZ;REV__nc|ENSG00000149091|Q13574-4|DGKZ;REV__nc|ENSG00000149091|Q13574-5|DGKZ;REV__nc|ENSG00000149091|Q13574-6|DGKZ;REV__nc|ENSG00000149091|Q13574-7|DGKZ;REV__nc|ENSG00000157680|O75912|DGKI 6.354104778181461 0.7857632046190106 3 {I|L} 1 -1 10.837 0.0 0.0 1.1294 0.0 0.0 828.4933508824744 0.0 828.4933508824744 0.0 0.8374554364688169 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1294 + + 15 + 1 1.199 33451.9 1.0 9981 5610 15583 HBL1_DMSO_200M_050219_1,15593 HBL1_DMSO_200M_050219_1,15593,FVLLPKML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15594 76.195 493.0 556160.0 25 0 53929.0 + 12330 GSLVLPRL 8 188 427.7765569961136 853.5385610590273 2 427.7764770388603 MULTI CID FTMS 0 0 0 15583 360491.46875 0.968422191698068 -2 0.1256484985351562 11 Unmodified _GSLVLPRL_ REV__ENST00000450554.6_1_19:56185845-56185950:+|nuORF 36.04419817259434 0.3004715606373109 3 {[SA]|[TG]}VV{I|L}PR{I|L} 8 -1 + 65.61 0.0 0.0 7.6869 7.6869 81.794 0.0 0.0 0.0 20.96910013008056 0.7660625688767198 0.7660625688767198 0.7660625688767198 0 1.174742501084005 1.3979400086720375 0.0 0.8737125054200234 {[SA]|[TG]}VV{I|L}PR{I|L};{[SA]|[TG]}VV{I|L}{I|L}[RP];{[SA]|[TG]}V{I|L}VPR{I|L};{[SA]|[TG]}V{I|L}V{I|L}[RP];{[SA]|[TG]}{I|L}VVPR{I|L};{[SA]|[TG]}{I|L}VV{I|L}[RP];{[SA]|[TG]}V{I|L}[RP]{I|L}V;{[SA]|[TG]}V{I|L}[RP]V{I|L};{[SA]|[TG]}V{I|L}{I|L}V[RP];{[SA]|[TG]}{I|L}V[RP]{I|L}V 7.6869;7.5971;6.6318;6.5421;5.4288;4.9296;4.4483;4.2668;3.8355;3.2453 -;-;-;-;-;-;-;-;-;- 529 + 1 1.199 211447.0 1.0 9982 5610 15583 HBL1_DMSO_200M_050219_1,15594 HBL1_DMSO_200M_050219_1,15594,GSLVLPRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15595 76.197 83.0 506550.0 25 0 69873.0 38768 TVDFYFEEV 9 77 574.7592916255289 1147.5040303178578 2 574.7607299685478 MULTI CID FTMS 0 0 0 15583 345825.375 0.4049995267983984 13 -1.1212921142578125 12 Unmodified _TVDFYFEEV_ ENSG00000196353|ENST00000429747|CPNE4;nc|ENSG00000196353|Q96A23-2|CPNE4 23.1484247019978 0.2366544122328345 3 {[TV]|[{I|L}S]}P{M(Oxidation (M))|F} 4 6 32.848 0.0 0.0 2.8626 0.0 0.0 0.0 700.2561129205686 700.2561129205686 15.875868242477187 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[TV]|[{I|L}S]}P{M(Oxidation (M))|F} 2.8626 - 28 + 1 1.199 39320.2 1.0 9983 5610 15583 HBL1_DMSO_200M_050219_1,15595 HBL1_DMSO_200M_050219_1,15595,TVDFYFEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15596 76.203 330.0 291970.0 25 0 39010.0 -1 0 129 673.4127066262555 672.4054301596555 1 673.4111205935478 MULTI CID FTMS 0 0 0 15583 330141.75 0.6090330632140095 3 -0.3007583618164062 13 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}VT{I|L} 6 -1 + 76.913 0.0 0.0 11.438 11.438 93.167 0.0 0.0 0.0 14.930380486862944 14.69273760456403 14.69273760456403 7.271212547196626 0 0.9274913471593704 1.6989700043360187 1.524227503252014 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}TV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}S{I|L};[{I|L}V]EVT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}S{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}VVT{I|L};[{I|L}V]ETV{I|L};{[TV]|[{I|L}S]}{I|L}VE{I|L};{[TV]|[{I|L}S]}{I|L}EV{I|L};{I|L}{I|L}DVT{I|L} 11.438;10.357;9.4008;9.218;8.9334;8.6225;8.1367;7.9107;7.8792;7.875 -;-;-;-;-;-;-;-;-;- 392 1 1.199 75456.9 1.0 9984 5610 15583 HBL1_DMSO_200M_050219_1,15596 HBL1_DMSO_200M_050219_1,15596, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15597 76.21 387.0 304080.0 25 0 20687.0 + 29933 QSLEYLEQV 9 165 554.7799020355588 1107.5452511379176 2 554.7796508669853 MULTI CID FTMS 0 0 0 15583 300316.84375 0.1340841462538017 6 -0.5366363525390625 14 Unmodified _QSLEYLEQV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 75.76082778847304 0.0188720312721366 3 {NN|[MP]|[D{I|L}]|[EV]}TQY{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]} 9 4 + 60.763 0.0 0.0 5.4863 5.4863 80.938 0.0 0.0 0.0 4.358178136379657 7.147642715192504 4.358178136379657 4.358178136379657 0 0.0 1.0969100130080565 2.19406113658569 0.5 {NN|[MP]|[D{I|L}]|[EV]}TQY{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}QEY{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}TYQ{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}EQY{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}SQY{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}T[AG]Y{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}TEY{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VTEY{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}EYQ{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}QSY{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]} 5.4863;5.0928;4.8747;4.7467;4.6689;4.6549;4.5701;4.2106;4.1352;4.1299 -;-;-;-;-;-;-;-;-;- 2729 1 1.199 94065.5 1.0 9985 5610 15583 HBL1_DMSO_200M_050219_1,15597 HBL1_DMSO_200M_050219_1,15597,QSLEYLEQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15598 76.217 386.0 328970.0 25 0 16068.0 12021 GPYDGFYLSY 10 160 591.2586867662793 1180.5028205993583 2 591.2595092654228 MULTI CID FTMS 0 0 0 15583 242794.390625 0.8981959942788624 1 -0.088775634765625 15 Unmodified _GPYDGFYLSY_ ENSG00000064932|ENST00000361757|SBNO2;ENST00000587673.5_1_19:1109414-1111598:-|nuORF;nc|ENSG00000064932|Q9Y2G9-3|SBNO2 14.838274106304384 0.5985701837916485 3 [PG]Y[CS]Y{I|L}{M(Oxidation (M))|F} 8 5 35.399 0.0 0.0 2.9986 0.0 0.0 0.0 247.12066065006096 247.12066065006096 23.18040976044614 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 0.0 0.0 [PG]Y[CS]Y{I|L}{M(Oxidation (M))|F} 2.9986 - 1329 + 1 1.199 95377.2 1.0 9986 5610 15583 HBL1_DMSO_200M_050219_1,15598 HBL1_DMSO_200M_050219_1,15598,GPYDGFYLSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15599 76.219 109.0 307040.0 25 0 79183.0 + 23933 LVQLKSQRPRV 11 59 662.4143801972713 0 662.4159423708916 PEAK CID FTMS 0 0 0 15583 262518.84375 0.2496306919587007 -4 0.2634048461914062 16 Unmodified _LVQLKSQRPRV_ REV__ENSG00000182330|ENST00000357367|PRAMEF8;REV__ENSG00000204510|ENST00000697200|PRAMEF7 1.3295316138638542 0.4761840153648598 3 S 1 -1 4.6041 0.0 0.0 0.34805 0.0 0.0 1136.676357585169 96.08255182437732 1232.7589094095465 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.34805 + + 5 + 1 1.199 32080.7 1.0 9987 5610 15583 HBL1_DMSO_200M_050219_1,15599 HBL1_DMSO_200M_050219_1,15599,LVQLKSQRPRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15600 76.227 379.0 405220.0 25 0 58791.0 -1 VLRCLGIPTRV 11 190 642.3836727806734 0 642.3840820193291 PEAK CID FTMS 0 0 0 15583 221277.015625 0.4036529840451124 9 -0.7421035766601562 17 Carbamidomethyl (C) _VLRC(Carbamidomethyl (C))LGIPTRV_ ENSG00000198959|ENST00000361475|TGM2;ENST00000468262.5_1_20:36766485-36793648:-|nuORF;nc|ENSG00000198959|P21980-2|TGM2 9.38312468134398 0.4559597037863106 3 {I|L}V 2 -1 7.9588 0.0 0.0 0.62045 0.0 0.0 771.4501325713092 296.1257723443969 1067.575904915706 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 0.62045 - 168 + 1 1.199 117507.9 1.0 9988 5610 15583 HBL1_DMSO_200M_050219_1,15600 HBL1_DMSO_200M_050219_1,15600,VLRCLGIPTRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15601 76.233 351.0 398370.0 25 0 32067.0 + 18257 KVIEAIRVEL 10 167 585.3664848038255 1168.718416674451 2 585.3658935427666 MULTI CID FTMS 0 0 0 15583 172011.640625 0.0500909484137459 8 -0.650604248046875 18 Unmodified _KVIEAIRVEL_ ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1 20.41088430110776 0.5050671972144007 3 KV{I|L}EN 5 6 63.895 0.0 0.0 5.4671 0.0 0.0 0.0 582.3487032525999 582.3487032525999 38.48882651598824 0.0 0.0 0.0 0 1.1861818737241734 0.721246399047171 0.3054621874040891 0.3807196863200844 KV{I|L}EN 5.4671 - 1118 + 1 1.199 108263.8 1.0 9989 5610 15583 HBL1_DMSO_200M_050219_1,15601 HBL1_DMSO_200M_050219_1,15601,KVIEAIRVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15602 76.245 678.0 335480.0 25 0 18882.0 4849 DFSSLKEETA 10 241 376.1815481244445 1125.5228149735335 3 376.5165283083916 MULTI CID FTMS 0 0 0 15583 171764.34375 1.0 0 0.0 19 Unmodified _DFSSLKEETA_ ENSG00000166579|ENST00000334527|NDEL1;ENST00000579880.5_1_17:8339285-8348278:+|nuORF;ENST00000580738.5_1_17:8339285-8349209:+|nuORF;nc|ENSG00000166579|Q9GZM8-2|NDEL1;nc|ENSG00000166579|Q9GZM8-3|NDEL1 5.296884461304476 0.7021353017287152 3 [WY]TV{I|L}S[DG]W 9 9 + 17.802 0.0 0.0 1.5817 1.5817 73.222 0.0 0.0 0.0 3.197756518413687 1.060085581237704 1.060085581237704 5.22878745280337 0 0.0 0.0 0.0 0.0 [WY]TV{I|L}S[DG]W;[WY]T{I|L}WWTA;[WY]T{I|L}VS[DG]W;[WY]TV{I|L}S[CS]PA;[WY]{I|L}S{I|L}S[DG]W;[WY]T{I|L}W[TA]W;[WY]TV[WQ]M{I|L};[WY]TV{I|L}S{[CP]|[EA]}SA;[WY]TV[HV][HN]A;[WY]TVK{[{M(Oxidation (M))|F}D]|MM}PA 1.5817;1.1171;1.0467;0.97371;0.96063;0.91998;0.91519;0.84484;0.82908;0.57471 -;-;-;-;-;-;-;-;-;- 717 + 1 1.199 178529.0 1.0 9990 5610 15583 HBL1_DMSO_200M_050219_1,15602 HBL1_DMSO_200M_050219_1,15602,DFSSLKEETA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15603 76.252 401.0 212040.0 25 0 40350.0 + 16375 IYQEKVLDL 9 64 1120.6250517846331 1119.6177753180334 1 1120.624682605267 MULTI CID FTMS 0 0 0 15583 125531.796875 0.256214154810462 4 -0.3431167602539062 20 Unmodified _IYQEKVLDL_ ENSG00000079616|ENST00000160827|KIF22;nc|ENSG00000079616|Q14807-2|KIF22 46.0223103267499 0.0490911897871712 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L}KV{I|L}D{I|L} 9 4 + 68.65 0.0 0.0 6.1316 6.1316 89.668 0.0 0.0 0.0 4.634155135475737 45.15031251017078 4.634155135475737 12.028937514676484 0 0.5 0.0 0.4247425010840047 0.6549471895720984 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L}KV{I|L}D{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L}K{I|L}VD{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K[Y{I|L}]V{I|L}D{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K[{I|L}V]Y{I|L}D{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K[YV]{I|L}{I|L}D{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K[Y{I|L}]{I|L}VD{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KH[{I|L}P]QQ{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K[{I|L}V]E[YV]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K[{I|L}V]E{I|L}[YV];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KH[{I|L}P]{I|L}QQ 6.1316;5.0572;4.4541;4.2957;3.9164;3.3797;1.5477;1.5033;1.1877;0.92341 -;-;-;-;-;-;-;-;-;- 461 1 1.199 60076.5 1.0 9991 5610 15583 HBL1_DMSO_200M_050219_1,15603 HBL1_DMSO_200M_050219_1,15603,IYQEKVLDL True True IYQEKVLDL 76.252412 1120.62468260527 328619781.0 15583.0 ENSG00000079616|ENST00000160827|KIF22;;nc|ENSG00000079616|Q14807-2|KIF22 7.21328337987264 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15605 76.257 2.0 13853000.0 25 0 1493200.0 + 25261 MVPRLTAVL 9 52 500.3044224539547 998.5942919747094 2 500.3047668337822 MULTI CID FTMS 0 0 0 15604 14236035.0 0.2619639927365711 4 -0.4117050170898437 1 Unmodified _MVPRLTAVL_ ENSG00000126773|ENST00000406854|PCNX4;ENST00000483571.5_1_14:60582139-60592559:+|nuORF 15.847184025352805 0.4077185912009129 3 V{I|L} 2 7 15.745 0.0 0.0 1.5768 0.0 0.0 768.4310972499032 0.0 768.4310972499032 0.0 1.0403972069151717 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + V{I|L} 1.5768 + + 12 + 1 1.214 27059.9 1.0 9992 5611 15604 HBL1_DMSO_200M_050219_1,15605 HBL1_DMSO_200M_050219_1,15605,MVPRLTAVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15606 76.258 4.2 8823900.0 25 0 1215500.0 + 34912 SQIHDIVLV 9 59 512.2952026555276 1022.5758523778552 2 512.2955200076103 MULTI CID FTMS 0 0 0 15604 7646210.0 0.2284750910722837 4 -0.4117050170898437 2 Unmodified _SQIHDIVLV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 20.41453444215458 0.284085796332423 3 {[QS]|[NT]}[H{I|L}]D{I|L}V{I|L}V 9 0 + 34.683 0.0 0.0 3.3917 3.3917 73.01 0.0 0.0 0.0 0.915149811213503 20.07901543333617 0.915149811213503 3.010299956639816 0 0.7742275032520141 0.0 0.3807196863200844 0.0 + + {[QS]|[NT]}[H{I|L}]D{I|L}V{I|L}V;[HD]{I|L}{[QS]|[NT]}{I|L}V{I|L}V;{[QS]|[NT]}[H{I|L}]DV{I|L}{I|L}V;[HD]{I|L}V[QT]V{I|L}V;[HD]{I|L}{[QS]|[NT]}V{I|L}{I|L}V;[HD]{I|L}V{[QS]|[NT]}{I|L}{I|L}V;[HA]WW{I|L}V{I|L}V;[HA]WWV{I|L}{I|L}V 3.3917;3.0974;2.9252;2.803;2.6308;2.3364;1.9193;1.4527 +;-;-;-;-;-;-;- + 105 1 1.214 35341.6 1.0 9993 5611 15604 HBL1_DMSO_200M_050219_1,15606 HBL1_DMSO_200M_050219_1,15606,SQIHDIVLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15607 76.259 17.0 2807500.0 25 0 279950.0 + 41456 VPLPAENVTI 10 84 526.8031801936137 1051.5918074540273 2 526.8033935427666 MULTI CID FTMS 0 0 0 15604 2819479.5 0.5978443097774178 -1 0.088775634765625 3 Unmodified _VPLPAENVTI_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 65.23502041540118 0.0228537820337083 3 [VP]{I|L}PAENVT{I|L} 10 0 + 59.363 0.0 0.0 5.6451 5.6451 77.68 0.0 0.0 0.0 1.829306835859868 10.452490459521968 1.829306835859868 1.829306835859868 0 1.1677353201839438 1.154901959985743 0.0 0.805462187404089 + + [VP]{I|L}PAENVT{I|L};[{I|L}P]VPAENVT{I|L};[VP]{I|L}PAEGGVT{I|L};[PA]ENV[{I|L}P]VT{I|L};[{I|L}P]VPAEGGVT{I|L};[PA]E[{I|L}P]VNVT{I|L};[PA]ENVV[{I|L}P]T{I|L};[VP]{I|L}PAE[KG]E{I|L};[{I|L}P]VPAE[KG]E{I|L};[VP]{I|L}PA{[QS]|[NT]}VE{I|L} 5.6451;5.4711;4.0076;3.8711;3.8337;3.3103;3.0135;2.6206;2.4466;2.1669 +;-;-;-;-;-;-;-;-;- + 323 1 1.214 44207.0 1.0 9994 5611 15604 HBL1_DMSO_200M_050219_1,15607 HBL1_DMSO_200M_050219_1,15607,VPLPAENVTI True True VPLPAENVTI 76.259057 526.803393542767 190635756.0 15604.0 nc|ENSG00000143569|Q14157-1|UBAP2L;;nc|ENSG00000143569|Q14157-4|UBAP2L;;nc|ENSG00000143569|Q14157-5|UBAP2L;;nc|ENSG00000143569|Q14157-3|UBAP2L;;ENSG00000143569|ENST00000428931|UBAP2L 6.732693990071614 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15608 76.26 28.0 1596300.0 25 0 326130.0 + 37367 TKRPQTLLQH 10 64 611.3559007792654 1220.6972486253308 2 611.3562499880791 MULTI CID FTMS 0 0 0 15604 2292186.25 0.5998734270467807 -5 0.3521804809570312 4 Unmodified _TKRPQTLLQH_ REV__ENSG00000131126|ENST00000598265|TEX101;REV__nc|ENSG00000131126|Q9BY14-2|TEX101 1.4819007175156935 0.719781833666733 3 Y 1 -1 9.732 0.0 0.0 0.79725 0.0 0.0 610.3783814801715 444.2419222467407 1054.6203037269122 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Y 0.79725 - 3 + 1 1.214 41993.2 1.0 9995 5611 15604 HBL1_DMSO_200M_050219_1,15608 HBL1_DMSO_200M_050219_1,15608,TKRPQTLLQH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15609 76.261 15.0 2552400.0 25 0 208260.0 + 10582 FVIRNIVEA 9 62 530.8111930196629 1059.6078331061258 2 530.8110229372978 MULTI CID FTMS 0 0 0 15604 1949043.75 0.0686567742777268 7 -0.56182861328125 5 Unmodified _FVIRNIVEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 32.30548876998284 0.1201446275138228 3 {I|L}VEA 4 5 17.752 0.0 0.0 1.6754 0.0 0.0 629.3638783185562 0.0 629.3638783185562 0.0 5.277945619647451 0.0 0.0 0 0.4564608101803796 0.0 0.0 0.0 + {I|L}VEA 1.6754 + + 20 1 1.214 36139.4 1.0 9996 5611 15604 HBL1_DMSO_200M_050219_1,15609 HBL1_DMSO_200M_050219_1,15609,FVIRNIVEA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15610 76.263 30.0 1755000.0 25 0 405920.0 + 32243 RWPDYVREL 9 52 617.3225132351072 1232.6304735370145 2 617.3230468630791 MULTI CID FTMS 0 0 0 15604 1246743.625 0.2371626893958488 -5 0.3521804809570312 6 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 20.580933911654288 0.2795815587326093 3 {I|L}{M(Oxidation (M))|F}RVY[DP]W 8 8 50.878 0.0 0.0 4.1276 0.0 0.0 0.0 153.0785311334594 153.0785311334594 40.39381281052492 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}RVY[DP]W 4.1276 - 57 + 1 1.214 47852.3 1.0 9997 5611 15604 HBL1_DMSO_200M_050219_1,15610 HBL1_DMSO_200M_050219_1,15610,RWPDYVREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15611 76.264 68.0 933540.0 25 0 184100.0 + 26209 NQIEDNDDFQL 11 81 675.7940088956558 1349.5734648581115 2 675.7943603396416 MULTI CID FTMS 0 0 0 15604 1011982.125 0.0515305046626255 8 -0.6533279418945312 7 Unmodified _NQIEDNDDFQL_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 49.52724829834842 0.1202481389936634 3 [AG]N{I|L}EDNDD 9 6 56.939 0.0 0.0 4.219 0.0 0.0 0.0 403.19810804604793 403.19810804604793 39.76703711335325 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3494850021680094 1.1989700043360187 [AG]N{I|L}EDNDD 4.219 - 415 1 1.214 57730.8 1.0 9998 5611 15604 HBL1_DMSO_200M_050219_1,15611 HBL1_DMSO_200M_050219_1,15611,NQIEDNDDFQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15612 76.265 46.0 1379700.0 25 0 137480.0 + 32253 RWPDYVREL 9 69 411.88404851646834 1232.630316149605 3 411.8839904665947 MULTI CID FTMS 0 0 0 15604 880944.5625 0.3309744363453088 -5 0.3521804809570312 8 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 55.50274090549119 0.0285720310785888 3 [WR]PDY 5 4 41.695 0.0 0.0 3.3826 0.0 0.0 0.0 512.2845856459373 512.2845856459373 20.05027451536506 0.0 0.0 0.0 0 1.3182503180159344 1.6989700043360187 0.3807196863200844 0.2742275032520141 + [WR]PDY 3.3826 + + 79 1 1.214 56312.2 1.0 9999 5611 15604 HBL1_DMSO_200M_050219_1,15612 HBL1_DMSO_200M_050219_1,15612,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15613 76.267 60.0 976420.0 25 0 122950.0 + 42489 VTITGIVKV 9 81 465.3050987891464 928.5956446450928 2 465.3051330447197 MULTI CID FTMS 0 0 0 15604 648315.0625 0.4705364511666926 -1 0.088775634765625 9 Unmodified _VTITGIVKV_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 38.17557092003332 0.0854718145212029 3 VT{I|L}T{[VA]|[{I|L}G]}VKV 9 0 + 74.778 0.0 0.0 8.0528 8.0528 97.828 0.0 0.0 0.0 44.97933455448525 11.962724883926654 11.962724883926654 74.7778145551772 0 0.7134679910804405 2.0 0.0 0.2059771852360797 + + VT{I|L}T{[VA]|[{I|L}G]}VKV 8.0528 + + 245 + 1 1.214 52918.1 1.0 10000 5611 15604 HBL1_DMSO_200M_050219_1,15613 HBL1_DMSO_200M_050219_1,15613,VTITGIVKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15614 76.268 62.0 496520.0 25 0 91331.0 + 17504 KPGVTHIIFRA 11 53 619.8693062180286 1237.724059502857 2 619.8701660037041 MULTI CID FTMS 0 0 0 15604 640577.0 0.235828606897222 -5 0.3521804809570312 10 Unmodified _KPGVTHIIFRA_ REV__ENSG00000196505|ENST00000369443|GDAP2;REV__ENST00000369442.3_1_1:118455226-118455283:-|nuORF;REV__ENST00000493555.5_1_1:118439453-118462815:-|nuORF;REV__nc|ENSG00000196505|Q9NXN4-2|GDAP2 1.0714618166137932 0.8700927088084459 3 {I|L} 1 -1 9.9148 0.0 0.0 0.80105 0.0 0.0 1106.628812165746 0.0 1106.628812165746 0.0 2.925133260145909 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80105 + + 6 + 1 1.214 28299.8 1.0 10001 5611 15604 HBL1_DMSO_200M_050219_1,15614 HBL1_DMSO_200M_050219_1,15614,KPGVTHIIFRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15615 76.27 33.0 1064200.0 25 0 61368.0 + 27373 IPYPLPPNY 9 77 536.787520797261 1071.560488661322 2 537.2878295779228 MULTI CID FTMS 0 0 0 15604 627668.0 0.0034553577389778 38 -2.9431381225585938 11 Unmodified _PIATSLPPNY_ ENST00000528098.5_1_11:57182763-57193651:-|nuORF;ENSG00000134802|ENST00000395124|SLC43A3;nc|ENSG00000134802|Q8NBI5-2|SLC43A3 15.847184025352805 0.5816416552707754 3 [{I|L}P]YP{I|L}P 6 6 32.14 0.0 0.0 2.9994 0.0 0.0 0.0 388.1529318588407 388.1529318588407 10.66946789630613 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}P]YP{I|L}P 2.9994 - 218 1 1.214 35707.9 1.0 10002 5611 15604 HBL1_DMSO_200M_050219_1,15615 HBL1_DMSO_200M_050219_1,15615,PIATSLPPNY False False IPYPLPPNY 76.269649 537.287829577923 30448810.0 15604.0 ENST00000528098.5_1_11:57182763-57193651:-|nuORF;;ENSG00000134802|ENST00000395124|SLC43A3;;nc|ENSG00000134802|Q8NBI5-2|SLC43A3 4.68209703763326 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15616 76.271 43.0 1931700.0 25 0 143790.0 + 31178 RLPKDFVDL 9 110 551.8166979396094 1101.6188429460187 2 551.8165771365166 MULTI CID FTMS 0 0 0 15604 538247.8125 0.5940882870382475 -1 0.088775634765625 12 Unmodified _RLPKDFVDL_ ENSG00000151465|ENST00000281141|CDC123;ENST00000497963.1_1_10:12288111-12291735:+|nuORF;ENST00000498747.1_1_10:12279256-12292333:+|nuORF 31.26834338654808 0.1333407332142048 3 [R{I|L}][KP]D{M(Oxidation (M))|F}VD{I|L} 9 0 + 55.517 0.0 0.0 5.0396 5.0396 79.93 0.0 0.0 0.0 8.873949984654246 44.92096992602434 8.873949984654246 4.771212547196626 0 0.7887254899964358 0.7958800173440752 0.3807196863200844 0.0 + + [R{I|L}][KP]D{M(Oxidation (M))|F}VD{I|L};[R{I|L}][KP]DV{M(Oxidation (M))|F}D{I|L};[R{I|L}][KP]VD{M(Oxidation (M))|F}D{I|L};[R{I|L}][KP]DD[{M(Oxidation (M))|F}V]{I|L};[R{I|L}][WM][R{I|L}]D{I|L};[R{I|L}][KP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VQQ;{[QN]|[E{I|L}]|[KN]}K{[ES]|[DT]|[{I|L}C]}{[VA]|[{I|L}G]}VD{I|L};[{M(Oxidation (M))|F}V]V{[VA]|[{I|L}G]}[RD]PS{I|L};{[QN]|[E{I|L}]|[KN]}K{[ES]|[DT]|[{I|L}C]}[R{I|L}]D{I|L};[R{I|L}][WM][K{I|L}]QQ 5.0396;4.6065;3.5545;2.7956;2.0426;1.1203;1.0004;0.46101;0.40747;0.17104 +;-;-;-;-;-;-;-;-;- + 294 1 1.214 71078.6 1.0 10003 5611 15604 HBL1_DMSO_200M_050219_1,15616 HBL1_DMSO_200M_050219_1,15616,RLPKDFVDL False True RLPKDFVDL 76.270859 551.816577136517 24363324.0 15604.0 ENST00000497963.1_1_10:12288111-12291735:+|nuORF;;ENST00000498747.1_1_10:12279256-12292333:+|nuORF;;ENSG00000151465|ENST00000281141|CDC123 5.622573534647624 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15617 76.272 29.0 1703400.0 25 0 135710.0 3529 CVFGGLKSRD 10 93 541.2771908823693 1080.5398288315384 2 541.2786743044853 MULTI CID FTMS 0 0 0 15604 471567.6875 0.311510536578325 3 -0.2543411254882812 13 Unmodified _CVFGGLKSRD_ ENSG00000196344|ENST00000437033|ADH7;nc|ENSG00000196344|P40394-2|ADH7;nc|ENSG00000196344|P40394|ADH7 9.38312468134398 0.6832340498775793 3 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F} 3 7 18.416 0.0 0.0 1.7044 0.0 0.0 0.0 728.370522761479 728.370522761479 6.733937431123282 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F} 1.7044 + + 65 1 1.214 45778.6 1.0 10004 5611 15604 HBL1_DMSO_200M_050219_1,15617 HBL1_DMSO_200M_050219_1,15617,CVFGGLKSRD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15618 76.273 49.0 442670.0 25 0 47848.0 + 40331 VHKEQLQI 8 60 497.7874850690371 993.5604172048742 2 497.7875549197197 MULTI CID FTMS 0 0 0 15604 527694.4375 0.620129189067067 -1 0.088775634765625 14 Unmodified _VHKEQLQI_ REV__ENSG00000004487|ENST00000400181|KDM1A;REV__nc|ENSG00000004487|O60341|KDM1A 5.230669730166228 0.792582437072536 3 {I|L} 1 -1 12.764 0.0 0.0 1.2847 0.0 0.0 862.4654750435445 0.0 862.4654750435445 0.0 -0.423377782955221 -0.423377782955221 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2847 + + 15 + 1 1.214 24933.0 1.0 10005 5611 15604 HBL1_DMSO_200M_050219_1,15618 HBL1_DMSO_200M_050219_1,15618,VHKEQLQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15619 76.275 35.0 1355200.0 25 0 133530.0 + 41689 VPRWSPPSI 9 95 519.7917903076363 1037.5690276820726 2 519.7922851443291 MULTI CID FTMS 0 0 0 15604 379368.125 0.9027603849071196 1 -0.044036865234375 15 Unmodified _VPRWSPPSI_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 24.99096001346401 0.2132109383330889 3 [{I|L}T]TPNV 6 8 29.592 0.0 0.0 2.8521 0.0 0.0 0.0 409.21287394845257 409.21287394845257 6.035605054892184 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.9749073637206092 0.0 [{I|L}T]TPNV 2.8521 - 319 1 1.214 43039.5 1.0 10006 5611 15604 HBL1_DMSO_200M_050219_1,15619 HBL1_DMSO_200M_050219_1,15619,VPRWSPPSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15620 76.276 50.0 1331500.0 25 0 83677.0 -1 YPFKPPMI 8 99 504.7645119820783 1007.5144710309568 2 504.7652465701103 MULTI CID FTMS 0 0 0 15604 360462.375 0.494546854587791 3 -0.2543411254882812 16 Oxidation (M) _YPFKPPM(Oxidation (M))I_ ENSG00000156587|ENST00000287156|UBE2L6 26.34127834903884 0.4900704351052977 3 YP{M(Oxidation (M))|F}KP[NG]SV 9 -1 + 57.26 0.0 0.0 5.6833 5.6833 89.549 0.0 0.0 0.0 43.2755575976697 1.5146450071128896 1.5146450071128896 19.79796613911713 0 0.3807196863200844 2.0 0.3054621874040891 0.0 YP{M(Oxidation (M))|F}KP[NG]SV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}PKGT[KC];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}PK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};YN{[HG]|PP}K[YK]V;YN{I|L}{I|L}[C(Carbamidomethyl (C))R]AV;YN{I|L}{I|L}[C(Carbamidomethyl (C))R]G{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YP[RV]{[ET]|[MV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YP{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};Y[WC(Carbamidomethyl (C))][RK]PV;YN[MT][RK]PV 5.6833;3.7183;3.5488;1.2757;0.88078;0.45798;0.32422;0.22804;0.087398;0.029838 -;-;-;-;-;-;-;-;-;- 272 + 1 1.214 55467.5 1.0 10007 5611 15604 HBL1_DMSO_200M_050219_1,15620 HBL1_DMSO_200M_050219_1,15620,YPFKPPMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15621 76.283 379.0 584480.0 25 0 53165.0 + 41938 VQIDDSYLVEA 11 199 626.3089463894364 1250.6033398456727 2 626.3087036013603 MULTI CID FTMS 0 0 0 15604 253609.03125 0.1342130952599882 5 -0.4478607177734375 17 Unmodified _VQIDDSYLVEA_ ENSG00000140548|ENST00000268154|ZNF710 55.23464941255904 0.0886405999673349 3 {NN|[MP]|[D{I|L}]|[EV]}QDSYV{I|L}[W{I|L}] 10 7 + 56.796 0.0 0.0 4.5415 4.5415 77.135 0.0 0.0 0.0 6.7118296759554354 19.85168850241125 6.7118296759554354 3.8381536598043127 0 0.2887254899964357 1.3010299956639813 1.5709991640913 0.7898166913470483 {NN|[MP]|[D{I|L}]|[EV]}QDSYV{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}AGDSYV{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}QDSVY{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}QDSY{I|L}V[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}QDVSY{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}AGDSVY{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}AGDSY{I|L}V[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}AGDVSY{I|L}[W{I|L}];{[CP]|[EA]}[RD]SYV{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}QVDSY{I|L}[W{I|L}] 4.5415;4.2346;4.0607;4.0396;3.8926;3.7538;3.7327;3.5857;3.2123;3.1604 -;-;-;-;-;-;-;-;-;- 4627 1 1.214 166763.1 1.0 10008 5611 15604 HBL1_DMSO_200M_050219_1,15621 HBL1_DMSO_200M_050219_1,15621,VQIDDSYLVEA True True VQIDDSYLVEA 76.282634 626.30870360136 76226862.0 15604.0 ENSG00000140548|ENST00000268154|ZNF710 5.488248825073242 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15622 76.29 387.0 254300.0 25 0 43323.0 -1 MAAACGPG 8 115 734.2991640118979 733.2918875452979 1 734.2982055544853 MULTI CID FTMS 0 0 0 15604 208825.515625 1.0 0 0.0 18 Carbamidomethyl (C) _MAAAC(Carbamidomethyl (C))GPG_ ENSG00000133872|ENST00000256255|SARAF;ENST00000517569.1_1_8:29931365-29940465:-|nuORF;ENST00000521083.1_1_8:29935734-29940465:-|nuORF 0.7936320650641473 0.8195151834710337 3 DDAWD{I|L} 6 -1 + 61.497 0.0 0.0 8.3865 8.3865 89.549 0.0 0.0 0.0 5.12212299665709 16.197887582883936 5.12212299665709 5.12212299665709 0 0.5994850021680094 0.958607314841775 0.75 0.0 DDAWD{I|L};[WD]ADD{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DDD{I|L};[TP]CADD{I|L};{[DA]|[EG]}DWD{I|L};[QP]{M(Oxidation (M))|F}DD{I|L};{[DA]|[EG]}WDD{I|L};{[CA]|SS}[TP]DD{I|L};HH{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F};[EP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}D{I|L} 8.3865;7.688;7.5558;5.1718;5.1272;4.9988;4.6506;3.1186;1.6374;0.75415 -;-;-;-;-;-;-;-;-;- 138 1 1.214 73490.7 1.0 10009 5611 15604 HBL1_DMSO_200M_050219_1,15622 HBL1_DMSO_200M_050219_1,15622,MAAACGPG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15623 76.293 186.0 442740.0 25 0 96306.0 + + 39377 HGLVIAVV 8 102 404.2576964313487 806.5008399294974 2 404.2577697634697 MULTI CID FTMS 0 0 0 15604 206558.46875 0.4687286306807952 -1 0.088775634765625 19 Unmodified _VAHVLAVV_ ENSG00000263961|ENST00000331555|RHEX 32.45364647766026 0.3613649037604678 3 {[HG]|PP}{I|L}V{I|L}AVV 8 -1 + 40.138 0.0 0.0 4.9768 4.9768 75.539 0.0 0.0 0.0 1.9312459835446203 9.731975075880328 1.9312459835446203 1.9312459835446203 0 0.7742275032520141 0.0 0.0 0.0 {[HG]|PP}{I|L}V{I|L}AVV;{[VA]|[{I|L}G]}HV{I|L}AVV;{[HG]|PP}{I|L}VA{I|L}VV;{[VA]|[{I|L}G]}HVA{I|L}VV;{[VA]|[{I|L}G]}VH{I|L}AVV;{[VA]|[{I|L}G]}VHA{I|L}VV;{[HG]|PP}{I|L}AV{I|L}VV;{[VA]|[{I|L}G]}HAV{I|L}VV;{[HG]|PP}{I|L}A{I|L}VVV;{[VA]|[{I|L}G]}HA{I|L}VVV 4.9768;4.7374;4.6036;4.3641;3.8707;3.4974;3.3123;3.0729;2.7207;2.4813 -;+;-;-;-;-;-;-;-;- + 149 1 1.214 69783.2 1.0 10010 5611 15604 HBL1_DMSO_200M_050219_1,15623 HBL1_DMSO_200M_050219_1,15623,VAHVLAVV False False HGLVIAVV 76.293184 404.25776976347 3977991.0 15604.0 ENSG00000263961|ENST00000331555|RHEX 4.40710989634196 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15624 76.296 167.0 798830.0 25 0 48140.0 + 24834 RLPDGFTQL 9 179 522.7864290096227 1043.5583050860453 2 523.7850219607353 MULTI CID FTMS 0 0 0 15604 187748.140625 0.384459473295544 1 -0.044036865234375 20 Unmodified _MPKNWKQL_ nc|ENSG00000180900|Q14160|SCRIB;nc|ENSG00000180900|Q14160-2|SCRIB;ENSG00000180900|ENST00000356994|SCRIB 14.581692164780916 0.6954967302934248 3 [{I|L}P]DRG{M(Oxidation (M))|F}T 7 7 21.678 0.0 0.0 2.0773 0.0 0.0 0.0 254.13371947497023 254.13371947497023 6.72971415184897 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.25 0.2742275032520141 [{I|L}P]DRG{M(Oxidation (M))|F}T 2.0773 - 1744 1 1.214 108248.5 1.0 10011 5611 15604 HBL1_DMSO_200M_050219_1,15624 HBL1_DMSO_200M_050219_1,15624,MPKNWKQL False False RLPDGFTQL 76.296463 523.785021960735 8001863.0 15604.0 nc|ENSG00000180900|Q14160|SCRIB;;nc|ENSG00000180900|Q14160-2|SCRIB;;ENSG00000180900|ENST00000356994|SCRIB 2.956309606631597 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15626 76.302 179.0 543050.0 25 0 133930.0 -1 HFLRKIIMVH 10 122 655.3834148770865 1308.7522768209728 2 655.3840820193291 MULTI CID FTMS 0 0 0 15625 438447.65625 0.7772715442437866 3 -0.3676681518554687 1 Oxidation (M) _HFLRKIIM(Oxidation (M))VH_ ENSG00000173715|ENST00000540737|C11orf80;nc|ENSG00000173715|Q8N6T0-1|TOP6BL;nc|ENSG00000173715|Q8N6T0-4|TOP6BL;nc|ENSG00000173715|Q8N6T0-5|TOP6BL 1.844237919475145 0.7181058121064529 3 K 1 -1 8.6759 0.0 0.0 0.66291 0.0 0.0 1162.6466229897212 0.0 1162.6466229897212 0.0 4.696510798231941 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.66291 + + 67 + 1 1.214 82194.1 1.0 10012 5612 15625 HBL1_DMSO_200M_050219_1,15626 HBL1_DMSO_200M_050219_1,15626,HFLRKIIMVH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15627 76.313 611.0 249510.0 25 0 15850.0 -1 0 187 651.3151856248824 3901.847454949694 6 651.6495239138603 MULTI CID FTMS 0 0 0 15625 168237.4375 1.0 0 0.0 2 3 {[QV]|[N{I|L}]|[RA]|[KV]}[YG]{I|L}C(Carbamidomethyl (C)){I|L}[DG]{I|L}{I|L} 11 -1 55.256 0.0 0.0 1.4162 0.0 0.0 0.0 2667.213762893306 2667.213762893306 38.85631964725408 0.0 0.0 0.0 0 0.0 2.0 0.0 1.2280546455476145 {[QV]|[N{I|L}]|[RA]|[KV]}[YG]{I|L}C(Carbamidomethyl (C)){I|L}[DG]{I|L}{I|L} 1.4162 - 3483 1 1.214 115938.8 1.0 10013 5612 15625 HBL1_DMSO_200M_050219_1,15627 HBL1_DMSO_200M_050219_1,15627, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15628 76.314 27.0 1638400.0 25 0 114280.0 + 1922 MAFLTQRTI 9 78 540.792534142238 0 540.7971069216728 PEAK CID FTMS 0 0 0 15625 870377.1875 0.9142089348829636 6 -0.517791748046875 3 Unmodified _AMFLFPLEI_ nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91|EP400;nc|ENSG00000183495|Q96L91-5|EP400;ENSG00000183495|ENST00000389561|EP400 16.942295170755138 0.2326366549411506 3 A{M(Oxidation (M))|F}{I|L}T 4 6 15.918 0.0 0.0 1.4744 0.0 0.0 131.03323615381333 513.2810152643186 644.314251418132 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{M(Oxidation (M))|F}{I|L}T 1.4744 - 57 + 1 1.214 39328.4 1.0 10014 5612 15625 HBL1_DMSO_200M_050219_1,15628 HBL1_DMSO_200M_050219_1,15628,AMFLFPLEI False False MAFLTQRTI 76.313832 540.797106921673 12192026.0 15625.0 nc|ENSG00000183495|Q96L91-4|EP400;;nc|ENSG00000183495|Q96L91-3|EP400;;nc|ENSG00000183495|Q96L91|EP400;;nc|ENSG00000183495|Q96L91-5|EP400;;ENSG00000183495|ENST00000389561|EP400 5.655219078063965 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15629 76.315 36.0 1094300.0 25 0 117220.0 + 29768 RLFDDVPQV 9 76 544.7884554625126 1087.5623579918251 2 544.7899658083916 MULTI CID FTMS 0 0 0 15625 651154.375 1.0 0 0.0 4 Unmodified _QPSAKAYQPV_ nc|ENSG00000164818|Q86Y56-2|DNAAF5;ENST00000438961.1_1_7:766900-790557:+|nuORF;ENSG00000164818|ENST00000297440|DNAAF5 9.38312468134398 0.6832340498775793 3 [WR]VD 4 10 21.198 0.0 0.0 1.9491 0.0 0.0 0.0 528.2572115533811 528.2572115533811 9.777904301057934 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [WR]VD 1.9491 - 22 + 1 1.214 37567.5 1.0 10015 5612 15625 HBL1_DMSO_200M_050219_1,15629 HBL1_DMSO_200M_050219_1,15629,QPSAKAYQPV False False RLFDDVPQV 76.315011 544.789965808392 5851998.5 15625.0 nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENST00000438961.1_1_7:766900-790557:+|nuORF;;ENSG00000164818|ENST00000297440|DNAAF5 7.309299786885579 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15630 76.317 81.0 630460.0 25 0 66876.0 + -1 KQMEQISQFL 10 89 634.3197362653137 1266.6249195974274 2 634.3214599490166 MULTI CID FTMS 0 0 0 15625 611204.875 1.0 0 0.0 5 Oxidation (M) _KQM(Oxidation (M))EQISQFL_ ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2;ENSG00000144834|ENST00000478951|TAGLN3 15.248480904072842 0.5916873121453583 3 {[QN]|[E{I|L}]|[KN]}ME{[SA]|[TG]}{I|L}SQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 11 -1 + 48.192 0.0 0.0 3.8048 3.8048 74.712 0.0 0.0 0.0 9.837034894002493 7.367585652254185 7.367585652254185 3.5654732351381213 0 0.5 1.0 0.7742275032520141 0.0 {[QN]|[E{I|L}]|[KN]}ME{[SA]|[TG]}{I|L}SQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}M{[WT]|[RM]}{I|L}SQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}ME{[SA]|[TG]}{I|L}S[AG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}E{[SA]|[TG]}{I|L}SQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}M{[WT]|[RM]}{I|L}S[AG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[WT]|[RM]}{I|L}SQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}E{[SA]|[TG]}{I|L}S[AG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QS]|[NT]}{[SA]|[TG]}E{[SA]|[TG]}{I|L}SQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[WT]|[RM]}{I|L}S[AG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QS]|[NT]}{[SA]|[TG]}{[WT]|[RM]}{I|L}SQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.8048;3.5233;3.0841;3.0281;2.7997;2.7466;2.3074;2.2979;2.0231;2.0136 -;-;-;-;-;-;-;-;-;- 278 1 1.214 48182.5 1.0 10016 5612 15625 HBL1_DMSO_200M_050219_1,15630 HBL1_DMSO_200M_050219_1,15630,KQMEQISQFL False False KQMEQISQFL 76.316874 634.321459949017 6701756.0 15625.0 ENSG00000158710|ENST00000368097|TAGLN2;;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;;nc|ENSG00000158710|P37802-2|TAGLN2;;ENSG00000144834|ENST00000478951|TAGLN3 2.723551591237386 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15631 76.318 66.0 1009500.0 25 0 105420.0 + 27686 PLITGTRLAV 10 120 520.8259146440049 1039.6372763548095 2 520.8214599490166 MULTI CID FTMS 0 0 0 15625 489859.625 0.2881013919358338 9 -0.785491943359375 6 Unmodified _PLITGTRLAV_ REV__ENSG00000130518|ENST00000392413|IQCN 36.506200033944 0.1944608063770638 3 {I|L}P{I|L}TE{I|L}[KG]G{I|L} 10 -1 + 52.062 0.0 0.0 5.0077 5.0077 76.327 0.0 0.0 0.0 18.071968632008435 0.5192435809753704 0.5192435809753704 2.430380486862944 0 1.048455006504028 2.0 0.0 0.3494850021680094 {I|L}P{I|L}TE{I|L}[KG]G{I|L};{I|L}P{I|L}TE{I|L}[KG]AV;{I|L}P{I|L}T{[VA]|[{I|L}G]}WK{I|L};{I|L}P{I|L}TE{I|L}[KQ]V;{I|L}P{I|L}T{[VA]|[{I|L}G]}GRT{I|L};{I|L}P{I|L}T{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{I|L}P{I|L}T{[VA]|[{I|L}G]}[QT]VV;{I|L}P{I|L}T{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}TV;{I|L}P{I|L}T{[VA]|[{I|L}G]}[{I|L}T]NV;{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}N{I|L}PPV 5.0077;4.7739;4.7401;4.6972;4.5607;4.1818;4.1304;3.948;3.8718;0.3049 -;-;-;-;-;-;-;-;-;- 877 + 1 1.214 57556.2 1.0 10017 5612 15625 HBL1_DMSO_200M_050219_1,15631 HBL1_DMSO_200M_050219_1,15631,PLITGTRLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15632 76.327 484.0 531550.0 25 0 29314.0 -1 VGARDLFMASC 11 211 593.2727617766487 1184.5309706200974 2 593.2733642458916 MULTI CID FTMS 0 0 0 15625 323538.75 0.2029960287972004 -3 0.1992721557617187 7 Oxidation (M) _VGARDLFM(Oxidation (M))ASC_ nc|ENSG00000143951|O95876-2|WDPCP 34.93206674587334 0.2904649469012649 3 D{I|L}{M(Oxidation (M))|F}CCCV 7 -1 38.148 0.0 0.0 3.2205 0.0 0.0 383.2292538810315 0.0 383.2292538810315 0.0 16.209697598903148 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 D{I|L}{M(Oxidation (M))|F}CCCV 3.2205 - 1023 1 1.214 189259.7 1.0 10018 5612 15625 HBL1_DMSO_200M_050219_1,15632 HBL1_DMSO_200M_050219_1,15632,VGARDLFMASC False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15633 76.336 482.0 391860.0 25 0 12868.0 + 18833 LASLLQAV 8 104 814.5036025001668 813.4963260335668 1 814.5038329958916 MULTI CID FTMS 0 0 0 15625 301113.90625 0.353515562228589 4 -0.4038238525390625 8 Unmodified _LASLLQAV_ ENST00000546727.5_1_12:113538464-113545121:-|nuORF 81.86404211737425 0.0837039284849515 3 {[TV]|[{I|L}S]}A{I|L}{I|L}GAAV 9 4 + 65.09 0.0 0.0 8.0013 8.0013 90.553 0.0 0.0 0.0 10.45880017344075 7.632192780232785 7.632192780232785 6.747425010840047 0 1.0044321917401078 1.0969100130080565 2.5994850021680094 0.0 {[TV]|[{I|L}S]}A{I|L}{I|L}GAAV;{[TV]|[{I|L}S]}A{I|L}G{I|L}AAV;{[TV]|[{I|L}S]}A{I|L}AVAAV;{[TV]|[{I|L}S]}A{I|L}{I|L}QAV;[{I|L}A]S{I|L}{I|L}GAAV;[{I|L}A]TV{I|L}GAAV;{[TV]|[{I|L}S]}A{I|L}GA{I|L}AV;{[TV]|[{I|L}S]}A{I|L}AG{I|L}AV;{[TV]|[{I|L}S]}A{I|L}Q{I|L}AV;[{I|L}A]S{I|L}G{I|L}AAV 8.0013;7.1719;7.0215;6.9604;6.7157;6.5258;6.2434;6.0929;5.9283;5.8862 -;-;-;-;-;-;-;-;-;- 3222 1 1.214 131607.0 1.0 10019 5612 15625 HBL1_DMSO_200M_050219_1,15633 HBL1_DMSO_200M_050219_1,15633,LASLLQAV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15634 76.338 117.0 486930.0 25 0 25687.0 + 1991 GQYEPHFDFA 10 104 605.7622087945732 1209.5098646559463 2 605.7611572146416 MULTI CID FTMS 0 0 0 15625 276728.15625 0.5103565723738825 3 -0.3676681518554687 9 Unmodified _ANYDSHPMLY_ nc|ENSG00000122884|P13674-2|P4HA1;ENSG00000122884|ENST00000394890|P4HA1 14.838274106304384 0.5985701837916485 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}THHP 6 7 20.111 0.0 0.0 1.6627 0.0 0.0 0.0 474.1629747238749 474.1629747238749 3.9844845328051512 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}THHP 1.6627 - 369 1 1.214 45214.4 1.0 10020 5612 15625 HBL1_DMSO_200M_050219_1,15634 HBL1_DMSO_200M_050219_1,15634,ANYDSHPMLY False False GQYEPHFDFA 76.33804 605.761157214642 5520243.0 15625.0 nc|ENSG00000122884|P13674-2|P4HA1;;ENSG00000122884|ENST00000394890|P4HA1 7.070116837819417 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15635 76.348 565.0 388960.0 25 0 30743.0 + -1 ADGVDHIDIY 10 218 580.2668364076299 1158.5191198820596 2 580.2666503787041 MULTI CID FTMS 0 0 0 15625 239087.265625 1.0 0 0.0 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADGVDHIDIY_ nc|ENSG00000111605|Q16630-3|CPSF6;ENSG00000111605|ENST00000435070|CPSF6;ENST00000550987.5_1_12:69633426-69648902:+|nuORF;nc|ENSG00000111605|Q16630-2|CPSF6 29.081581746732265 0.3152867722954398 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WT]|[RM]}D{I|L}D{I|L}Y 9 -1 + 45.261 0.0 0.0 3.9068 3.9068 71.636 0.0 0.0 0.0 1.6959252276409842 14.09256854528806 1.6959252276409842 1.6959252276409842 0 0.6549471895720985 1.3010299956639813 0.5356668758921829 0.3054621874040891 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WT]|[RM]}D{I|L}D{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}MN{I|L}D{I|L}Y;[HD]{I|L}DQQQ{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{[WT]|[RM]}{I|L}D{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}YMN{I|L}D{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{[ES]|[DT]|[{I|L}C]}D{I|L}D{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[TA]D{I|L}D{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}HDQQQ{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}A{[WT]|[RM]}{I|L}D{I|L}Y;[H{I|L}]DDQQQ{I|L}Y 3.9068;3.7604;3.5607;3.5238;3.4354;3.3438;3.3081;3.1425;3.0845;2.998 -;-;-;-;-;-;-;-;-;- 8994 1 1.214 164210.3 1.0 10021 5612 15625 HBL1_DMSO_200M_050219_1,15635 HBL1_DMSO_200M_050219_1,15635,ADGVDHIDIY False False ADGVDHIDIY 76.347947 580.266650378704 3283441.75 15625.0 nc|ENSG00000111605|Q16630-3|CPSF6;;ENSG00000111605|ENST00000435070|CPSF6;;ENST00000550987.5_1_12:69633426-69648902:+|nuORF;;nc|ENSG00000111605|Q16630-2|CPSF6 3.7775425910949703 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15636 76.358 578.0 226810.0 25 0 10031.0 8768 EVSVKHTLKL 10 198 577.3480465475262 1152.6815401618524 2 577.3480102419853 MULTI CID FTMS 0 0 0 15625 228559.5625 0.7803380035786757 2 -0.2103042602539062 11 Unmodified _EVSVKHTLKL_ ENSG00000138686|ENST00000264499|BBS7;nc|ENSG00000138686|Q8IWZ6-2|BBS7 8.155526934196011 0.6889124077178598 3 [TP]K{[{M(Oxidation (M))|F}H]|[RQ]}{[VA]|[{I|L}G]}{I|L}Q{I|L} 10 8 [TP]K{[{M(Oxidation (M))|F}H]|[RQ]}{[VA]|[{I|L}G]}{I|L}Q + + 11.594 -0.83483 -0.081719 1.0058 1.0058 48.375 0.0 0.0 0.0 0.0 -9.832881222565248 -9.832881222565248 0.0 0 0.0 0.0 0.0 0.0 [TP]K{[{M(Oxidation (M))|F}H]|[RQ]}{[VA]|[{I|L}G]}{I|L}Q{I|L} 1.0058 - 967 + 1 1.214 101671.0 1.0 10022 5612 15625 HBL1_DMSO_200M_050219_1,15636 HBL1_DMSO_200M_050219_1,15636,EVSVKHTLKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15637 76.37 617.0 273150.0 25 0 16486.0 + 18985 LDGGKELKIDI 11 210 600.8445985397952 1199.6746441463904 2 601.3469116091728 MULTI CID FTMS 0 0 0 15625 156904.203125 0.333058434375422 17 -1.243499755859375 12 Unmodified _LDGGKELKIDI_ nc|ENSG00000282100|Q58FF6|HSP90AB4P 30.7034409873982 0.3712764582118616 3 {I|L}{M(Oxidation (M))|F}VK{I|L} 5 8 37.727 0.0 0.0 3.1448 0.0 0.0 0.0 596.2683809869749 596.2683809869749 13.915155845141108 0.0 0.0 0.0 0 0.7396518287104438 0.0 0.0 0.3252574989159953 {I|L}{M(Oxidation (M))|F}VK{I|L} 3.1448 - 2256 + 1 1.214 121087.7 1.0 10023 5612 15625 HBL1_DMSO_200M_050219_1,15637 HBL1_DMSO_200M_050219_1,15637,LDGGKELKIDI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15638 76.373 168.0 402330.0 25 0 34309.0 + 9082 FFYEGSRVL 9 113 559.287195435215 1116.55983793723 2 559.2894164919853 MULTI CID FTMS 0 0 0 15625 151346.1875 0.4925117654823456 3 -0.3676681518554687 13 Unmodified _FFFSDRVSL_ ENST00000478085.5_1_22:40800171-40802852:+|nuORF;ENSG00000100359|ENST00000248929|SGSM3;nc|ENSG00000100359|Q96HU1-2|SGSM3 16.942295170755138 0.3780752226737986 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YERRS{I|L} 8 4 + 28.466 0.0 0.0 2.5494 2.5494 74.257 0.0 0.0 0.0 6.989700043360188 5.440680443502757 5.440680443502757 5.440680443502757 0 0.3807196863200844 0.0 0.3054621874040891 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YERRS{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YERRTV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RV]{I|L}C(Carbamidomethyl (C))[{M(Oxidation (M))|F}E] 2.5494;2.0621;0.037881 -;-;- 134 + 1 1.214 57720.1 1.0 10024 5612 15625 HBL1_DMSO_200M_050219_1,15638 HBL1_DMSO_200M_050219_1,15638,FFFSDRVSL False False FFYEGSRVL 76.373344 559.289416491985 3118617.5 15625.0 ENST00000478085.5_1_22:40800171-40802852:+|nuORF;;ENSG00000100359|ENST00000248929|SGSM3;;nc|ENSG00000100359|Q96HU1-2|SGSM3 3.0717167059580484 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15639 76.384 594.0 167360.0 25 0 5954.9 -1 HDCVFFAVQVL 11 173 667.8325537780086 1333.650554622817 2 667.8329955935478 MULTI CID FTMS 0 0 0 15625 123280.984375 0.2137314779197841 4 -0.4038238525390625 14 Carbamidomethyl (C) _HDC(Carbamidomethyl (C))VFFAVQVL_ ENSG00000140326|ENST00000356231|CDAN1;nc|ENSG00000140326|Q8IWY9-1|CDAN1 36.12702656103203 0.2720571796884491 3 {[QV]|[N{I|L}]|[RA]|[KV]}[NP]Y[C(Carbamidomethyl (C))D]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 11 -1 + 30.861 0.0 0.0 2.314 2.314 67.569 0.0 0.0 0.0 1.0318267198515052 7.367585652254178 1.0318267198515052 1.0318267198515052 0 0.3054621874040891 0.5086383061657274 1.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[NP]Y[C(Carbamidomethyl (C))D]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}T][HS]Y[C(Carbamidomethyl (C))D]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[NP]N{I|L}Y[C(Carbamidomethyl (C))D]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[VA]|[{I|L}G]}G[NP]Y[C(Carbamidomethyl (C))D]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}[HT]Y[C(Carbamidomethyl (C))D]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[PG]GN{I|L}Y[C(Carbamidomethyl (C))D]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[NP]GG{I|L}Y[C(Carbamidomethyl (C))D]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}[VP]Y[C(Carbamidomethyl (C))D]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[PG]GGG{I|L}Y[C(Carbamidomethyl (C))D]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HH[C(Carbamidomethyl (C))H]AV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 2.314;2.2366;2.0396;1.9769;1.9425;1.8439;1.3551;1.3281;1.1617;0.88326 -;-;-;-;-;-;-;-;-;- 846 1 1.214 75365.7 1.0 10025 5612 15625 HBL1_DMSO_200M_050219_1,15639 HBL1_DMSO_200M_050219_1,15639,HDCVFFAVQVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15640 76.398 800.0 261340.0 25 0 25130.0 + 40052 VGGLLPEK 8 232 406.74613768612113 0 406.7458373904228 PEAK CID FTMS 0 0 0 15625 131155.4375 1.0 0 0.0 15 Unmodified _VGGLLPEK_ REV__ENST00000466390.5_1_1:35545015-35561430:+|nuORF 2.889219685676258 0.5898224805723975 3 S 1 -1 2.2185 0.0 0.0 0.27339 0.0 0.0 504.31455823181415 217.1081942193969 721.4227524512111 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.27339 - 2 + 1 1.214 163458.6 0.7799999713897705 10026 5612 15625 HBL1_DMSO_200M_050219_1,15640 HBL1_DMSO_200M_050219_1,15640,VGGLLPEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15641 76.413 800.0 328700.0 25 0 29809.0 + 22592 LPYFIRNKL 9 242 388.5694163010385 1162.6864195033154 3 388.9043762087822 MULTI CID FTMS 0 0 0 15625 122383.5546875 1.0 0 0.0 16 Unmodified _LPYFIRNKL_ ENSG00000169180|ENST00000304658|XPO6;nc|ENSG00000169180|Q96QU8-2|XPO6 53.832793166522166 0.0319663582346103 3 {I|L}PY{I|L}K 5 4 54.523 0.0 0.0 4.6894 0.0 0.0 0.0 545.2832125299436 545.2832125299436 29.659578558561293 0.0 0.0 0.0 0 0.359724654087736 1.0969100130080565 0.0 1.0994850021680094 {I|L}PY{I|L}K 4.6894 - 507 + 1 1.214 213748.2 0.75 10027 5612 15625 HBL1_DMSO_200M_050219_1,15641 HBL1_DMSO_200M_050219_1,15641,LPYFIRNKL True True LPYFIRNKL 76.412555 388.904376208782 2718779.25 15625.0 XPO6|p.H98Y|1|0.08|ENSG00000169180|chr16:28176011-28176011|G/A|missense_variant;;ENSG00000169180|ENST00000304658|XPO6;;nc|ENSG00000169180|Q96QU8-2|XPO6 5.145364125569661 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15642 76.424 650.0 204790.0 25 0 11329.0 -1 0 135 745.3352350009562 2232.983875603069 3 746.0011474490166 MULTI CID FTMS 0 0 0 15625 126301.5859375 0.7268053398733484 -3 0.1992721557617187 17 3 [QT]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}AQQNA{M(Oxidation (M))|F} 11 -1 38.625 0.0 0.0 1.7297 0.0 0.0 0.0 990.4316113610944 990.4316113610944 -4.186103640707081 0.0 -4.186103640707081 0.0 0 0.0 0.0 0.4247425010840047 0.5941876774005248 [QT]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}AQQNA{M(Oxidation (M))|F} 1.7297 - 8560 1 1.214 97951.4 1.0 10028 5612 15625 HBL1_DMSO_200M_050219_1,15642 HBL1_DMSO_200M_050219_1,15642, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15643 76.436 669.0 133720.0 25 0 6375.6 -1 0 152 690.6342386444697 0 690.9172241091728 PEAK CID FTMS 0 0 0 -1 0 18 3 VA{I|L}V 4 -1 13.532 0.0 0.0 0.98111 0.0 0.0 689.8320016035894 304.1416414850219 993.9736430886114 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA{I|L}V 0.98111 - 116 + 1 1.214 66818.5 1.0 10029 5612 15625 HBL1_DMSO_200M_050219_1,15643 HBL1_DMSO_200M_050219_1,15643, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15644 76.451 800.0 174190.0 25 0 23412.0 + 41333 VPILAPRI 8 148 439.79465879941694 877.5747646656339 2 439.7946349978447 MULTI CID FTMS 0 0 0 15625 105627.5078125 0.0073109458725646 20 -1.41339111328125 19 Unmodified _VPILAPRI_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 46.92087301778293 0.1537303740847981 3 VP{I|L}{I|L}A[RP]{I|L} 8 0 + 57.885 0.0 0.0 6.5961 6.5961 86.955 0.0 0.0 0.0 38.475409843999344 6.075090722850263 6.075090722850263 6.690067809585756 0 0.6237125054200234 1.0 0.0 0.3054621874040891 + + VP{I|L}{I|L}A[RP]{I|L};VP{I|L}{I|L}[RP]A{I|L} 6.5961;5.8337 +;- + 267 + 1 1.214 108596.6 0.7799999713897705 10030 5612 15625 HBL1_DMSO_200M_050219_1,15644 HBL1_DMSO_200M_050219_1,15644,VPILAPRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15645 76.464 800.0 146500.0 25 0 8744.8 9892 FPFSIWFCVK 10 183 425.22134587561374 1272.6422082270412 3 425.2202636599541 MULTI CID FTMS 0 0 0 15625 65077.078125 0.1566703129619779 5 -0.4791336059570312 20 Unmodified _FPFSIWFCVK_ ENSG00000116218|ENST00000367615|NPHS2;nc|ENSG00000116218|Q9NP85-2|NPHS2 9.38312468134398 0.6832340498775793 3 KQ{I|L}AQ 5 9 21.52 0.0 0.0 1.691 0.0 0.0 408.1786594983287 293.12571130924067 701.3043708075694 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6549471895720985 KQ{I|L}AQ 1.691 - 371 + 1 1.214 99816.7 0.8399999737739563 10031 5612 15625 HBL1_DMSO_200M_050219_1,15645 HBL1_DMSO_200M_050219_1,15645,FPFSIWFCVK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15647 76.469 2.1 26758000.0 25 0 4776700.0 + 2559 ASFNDTFVHV 10 70 568.7723329720903 1135.5301130109806 2 568.7726318240166 MULTI CID FTMS 0 0 0 15646 24051488.0 0.9263106002660524 -1 0.1679458618164062 1 Unmodified _ASFNDTFVHV_ ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF 34.40172386719151 0.2166836008404837 3 {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV] 10 0 + 70.947 0.0 0.0 6.2479 6.2479 90.403 0.0 0.0 0.0 42.00196235524295 7.269987279362624 7.269987279362624 13.4119644963393 0 0.3054621874040891 1.5228787452803376 0.0 0.4247425010840047 + + {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV];{[SA]|[TG]}{M(Oxidation (M))|F}GGDT{M(Oxidation (M))|F}V[HV];[HV]{M(Oxidation (M))|F}T[MT]N{[WT]|[RM]};[HV]{M(Oxidation (M))|F}TD[KC]{[WT]|[RM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[H{I|L}][MT]N{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDN{[WT]|[RM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[H{I|L}]D[KC]{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDGG{[WT]|[RM]};[HV]{M(Oxidation (M))|F}T[MT]GG{[WT]|[RM]} 6.2479;5.0668;2.1618;1.8967;1.8574;1.8361;1.5923;1.0251;0.97685 +;-;-;-;-;-;-;-;- + 209 + 1 1.213 47288.8 1.0 10032 5613 15646 HBL1_DMSO_200M_050219_1,15647 HBL1_DMSO_200M_050219_1,15647,ASFNDTFVHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15648 76.47 4.5 14073000.0 25 0 1908000.0 21553 LPKAFLSPL 9 83 493.30750595992856 984.6004589866571 2 493.3087951540947 MULTI CID FTMS 0 0 0 15646 5805187.5 0.3951317730409175 -3 0.3007583618164062 2 Unmodified _LPKAFLSPL_ ENST00000235835.7_1_1:19630644-19630701:-|nuORF 20.453626601364224 0.2830276176381075 3 {I|L}P 2 7 43.711 0.0 0.0 4.4395 0.0 0.0 0.0 771.4412127752199 771.4412127752199 10.110986844014462 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.4395 + + 597 + 1 1.213 54272.2 1.0 10033 5613 15646 HBL1_DMSO_200M_050219_1,15648 HBL1_DMSO_200M_050219_1,15648,LPKAFLSPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15649 76.471 4.8 26087000.0 25 0 3622200.0 + 18555 LAADWLPSL 9 114 493.26980998215055 984.5250670311012 2 493.2699767947197 MULTI CID FTMS 0 0 0 15646 6617230.0 0.117291394304966 -3 0.3007583618164062 3 Unmodified _LAADWLPSL_ ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1 50.855029805455786 0.0384952370514206 3 [{I|L}P][KC]D{I|L}PS{I|L} 9 4 + 60.357 0.0 0.0 6.1306 6.1306 83.578 0.0 0.0 0.0 15.720267186999862 16.751736484954378 15.720267186999862 4.771212547196626 0 1.079689690656103 2.0 0.6549471895720985 0.2887254899964357 [{I|L}P][KC]D{I|L}PS{I|L};[{I|L}P][KC]{I|L}DPS{I|L};[{I|L}P][KC]{I|L}SPD{I|L};[{I|L}P][KC]DP{I|L}S{I|L};[{I|L}P]S[KP]{M(Oxidation (M))|F}PS{I|L};[VG]VWD{I|L}PS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}D{I|L}PS{I|L};[VG]VW{I|L}DPS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}{I|L}DPS{I|L};[KP]{[ES]|[DT]|[{I|L}C]}D{I|L}PS{I|L} 6.1306;5.6459;4.8668;4.5663;4.5622;4.5338;4.4093;4.0492;3.9247;3.6949 -;-;-;-;-;-;-;-;-;- 1427 1 1.213 98801.6 1.0 10034 5613 15646 HBL1_DMSO_200M_050219_1,15649 HBL1_DMSO_200M_050219_1,15649,LAADWLPSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15650 76.472 11.0 3163900.0 25 0 475000.0 + 43696 YAYDGKDYLAL 11 60 646.3138268588649 1290.6131007845297 2 646.3142578005791 MULTI CID FTMS 0 0 0 15646 4269392.5 0.8610518367467536 1 -0.0423583984375 4 Unmodified _YAYDGKDYLAL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 27.22323531849824 0.4529927607131788 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}A{I|L} 11 5 + 66.943 0.0 0.0 5.1869 5.1869 78.295 0.0 0.0 0.0 16.314926133456254 38.28396073130169 16.314926133456254 3.01029995663982 0 1.1989700043360187 2.0 0.7742275032520141 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}YA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}YAYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DY{I|L}AYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]{I|L}DYAYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}AYYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]{I|L}DAYYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]DYAYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]{I|L}ADYYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]DAYYA{I|L} 5.1869;4.9536;4.8612;4.8578;4.628;4.3947;4.1615;4.0809;3.7884;3.6144 -;-;-;-;-;-;-;-;-;- 429 1 1.213 35163.0 1.0 10035 5613 15646 HBL1_DMSO_200M_050219_1,15650 HBL1_DMSO_200M_050219_1,15650,YAYDGKDYLAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15651 76.473 12.0 4241600.0 25 0 402300.0 + -1 QSLQMWLV 8 83 510.7620423789908 1019.5095318247816 2 511.7682983279228 MULTI CID FTMS 0 0 0 15646 2321587.0 0.8597136222193666 -3 0.3007583618164062 5 Oxidation (M) _QSLQM(Oxidation (M))WLV_ REV__nc|ENSG00000211806|A0A0B4J276|TRAV25 14.581692164780916 0.6954967302934248 3 KAV 3 -1 15.406 0.0 0.0 1.5111 0.0 0.0 703.2989738187255 0.0 703.2989738187255 0.0 2.307131330965719 0.0 0.0 0 0.0 0.0 0.0 0.0 KAV 1.5111 - 132 + 1 1.213 46316.1 1.0 10036 5613 15646 HBL1_DMSO_200M_050219_1,15651 HBL1_DMSO_200M_050219_1,15651,QSLQMWLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15652 76.475 20.0 1283700.0 25 0 135850.0 + 40363 VHRRYLARH 9 54 604.3483545669761 1206.6821562007522 2 604.3485595583916 MULTI CID FTMS 0 0 0 15646 1969970.375 0.485257824191895 1 -0.0423583984375 6 Unmodified _VHRRYLARH_ REV__ENSG00000127419|ENST00000264771|TMEM175;REV__ENST00000452360.6_1_4:942397-950358:+|nuORF;REV__ENST00000506669.1_1_4:946199-949276:+|nuORF;REV__ENST00000515876.5_1_4:941527-949679:+|nuORF;REV__nc|ENSG00000127419|Q9BSA9-2|TMEM175 0.6014990680409731 0.8936861360942873 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.213 25025.0 1.0 10037 5613 15646 HBL1_DMSO_200M_050219_1,15652 HBL1_DMSO_200M_050219_1,15652,VHRRYLARH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15653 76.476 15.0 2737200.0 25 0 197830.0 + -1 KMMDVTVTI 9 76 518.7744392634581 1035.5343255937162 2 519.2735473513603 MULTI CID FTMS 0 0 0 15646 1861931.125 0.3564394791426375 -3 0.3007583618164062 7 Oxidation (M) _LSVPM(Oxidation (M))PYTL_ ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;nc|ENSG00000185164|Q5JPE7|NOMO2 12.531546534597751 0.4974689918368763 3 [{I|L}T][C(Carbamidomethyl (C))M]VTV{[NV]|[RG]} 9 -1 + 37.584 0.0 0.0 3.6294 3.6294 81.804 0.0 0.0 0.0 12.218487496163563 6.47817481888638 6.47817481888638 12.218487496163563 0 0.0 1.5228787452803376 0.8252574989159953 0.0 [{I|L}T][C(Carbamidomethyl (C))M]VTV{[NV]|[RG]};[QT][{M(Oxidation (M))|F}E]VTV{[NV]|[RG]} 3.6294;2.4495 -;- 60 1 1.213 41565.7 1.0 10038 5613 15646 HBL1_DMSO_200M_050219_1,15653 HBL1_DMSO_200M_050219_1,15653,LSVPMPYTL False False KMMDVTVTI 76.47576 519.27354735136 25638938.0 15646.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 4.600112756093343 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15654 76.477 17.0 2527900.0 25 0 205020.0 + 22676 LPYGEGLRI 9 69 509.293737099496 1016.572921265792 2 509.2915222048759 MULTI CID FTMS 0 0 0 15646 1817147.125 0.4909321342627148 1 -0.0423583984375 8 Unmodified _LPYVHIIY_ ENSG00000149679|ENST00000279101|CABLES2 17.086550045450526 0.6584923310065985 3 {I|L}PYGE 5 5 53.188 0.0 0.0 5.232 0.0 0.0 0.0 454.2779024713501 454.2779024713501 27.501225267834 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {I|L}PYGE 5.232 - 58 + 1 1.213 41343.5 1.0 10039 5613 15646 HBL1_DMSO_200M_050219_1,15654 HBL1_DMSO_200M_050219_1,15654,LPYVHIIY False False LPYGEGLRI 76.476937 509.291522204876 20421882.0 15646.0 ENSG00000149679|ENST00000279101|CABLES2 4.128686904907227 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15655 76.478 22.0 2066400.0 25 0 323650.0 + -1 VLCRLVCLSI 10 65 588.33538923541 1174.65622553762 2 588.3355590701103 MULTI CID FTMS 0 0 0 15646 1709798.0 0.5337770137516892 1 -0.0423583984375 9 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))RLVCLSI_ REV__ENST00000447069.5_3_2:201677557-201677948:+|nuORF 3.944395688203298 0.708391353636983 3 D 1 -1 1.5938 0.0 0.0 0.13568 0.0 0.0 777.4679148460169 279.14447961978755 1056.6123944658043 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.13568 - 3 + 1 1.213 40249.2 1.0 10040 5613 15646 HBL1_DMSO_200M_050219_1,15655 HBL1_DMSO_200M_050219_1,15655,VLCRLVCLSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15656 76.479 31.0 1680200.0 25 0 183540.0 + 17747 KQADPFASL 9 81 488.7591614411615 975.503769949123 2 488.7590515017509 MULTI CID FTMS 0 0 0 15646 1656127.875 0.2632590197998893 -3 0.3007583618164062 10 Unmodified _KQADPFASL_ ENSG00000148110|ENST00000375344|MFSD14B;nc|ENSG00000148110|Q5SR56-2|MFSD14B 53.832793166522166 0.0319663582346103 3 {[TV]|[{I|L}S]}A[NG]P{M(Oxidation (M))|F}AS{I|L} 10 4 + 55.996 0.0 0.0 5.7403 5.7403 85.099 0.0 0.0 0.0 7.736036226329233 10.012262311882765 7.736036226329233 7.736036226329233 0 1.0629529932484498 1.3979400086720375 0.4247425010840047 0.3494850021680094 {[TV]|[{I|L}S]}A[NG]P{M(Oxidation (M))|F}AS{I|L};{[SA]|[TG]}{I|L}[NG]P{M(Oxidation (M))|F}AS{I|L};{[TV]|[{I|L}S]}[WD]GKAS{I|L};{[TV]|[{I|L}S]}A[NG]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}AGKAS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}GKAS{I|L};{[ES]|[DT]|[{I|L}C]}VDAGKAS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}QKAS{I|L};{[TV]|[{I|L}S]}[HS][YV]AS{I|L};{[ES]|[DT]|[{I|L}C]}VDQKAS{I|L} 5.7403;4.9472;3.3799;3.1639;2.8746;2.8222;2.7158;2.6941;2.6634;2.5353 -;-;-;-;-;-;-;-;-;- 335 1 1.213 49409.8 1.0 10041 5613 15646 HBL1_DMSO_200M_050219_1,15656 HBL1_DMSO_200M_050219_1,15656,KQADPFASL True True KQADPFASL 76.479296 488.759051501751 78208624.0 15646.0 nc|ENSG00000148110|Q5SR56-2|MFSD14B;;ENSG00000148110|ENST00000375344|MFSD14B 4.4080995718638105 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15657 76.48 21.0 1436200.0 25 0 325590.0 + 15561 IPYHIVNI 8 61 484.7828682012088 967.5511834692176 2 484.7824279665947 MULTI CID FTMS 0 0 0 15646 1447616.25 0.5489377059773094 -3 0.3007583618164062 11 Unmodified _IPYHIVNI_ ENSG00000031698|ENST00000234677|SARS1 22.4526382665184 0.5719518724627818 3 DV[HQ]N{I|L} 6 5 23.416 0.0 0.0 2.4202 0.0 0.0 243.19615524831767 0.0 243.19615524831767 0.0 12.931825014007217 0.0 0.0 0 0.0 0.0 0.0 0.5 DV[HQ]N{I|L} 2.4202 - 113 + 1 1.213 30274.7 1.0 10042 5613 15646 HBL1_DMSO_200M_050219_1,15657 HBL1_DMSO_200M_050219_1,15657,IPYHIVNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15658 76.482 52.0 1805600.0 25 0 183980.0 + 44043 YILHVLQSL 9 94 543.3192759921054 1084.6239990510107 2 543.3195678591728 MULTI CID FTMS 0 0 0 15646 810594.5625 0.526588094228459 -3 0.3007583618164062 12 Unmodified _YILHVLQSL_ REV__ENSG00000215251|ENST00000380266|FASTKD5 44.40701690623563 0.0526327925666318 3 [Q{I|L}]REV{I|L}QS{I|L} 9 -1 + 69.659 0.0 0.0 6.4224 6.4224 89.095 0.0 0.0 0.0 2.2676015655876256 45.75765943524473 2.2676015655876256 9.208187539523747 0 0.9247425010840048 0.0 0.5 0.3807196863200844 [Q{I|L}]REV{I|L}QS{I|L};[Q{I|L}]REV{I|L}[AG]S{I|L};{[TV]|[{I|L}S]}Q[R{I|L}]{I|L}QD{I|L};{[QS]|[NT]}{I|L}[R{I|L}]{I|L}QD{I|L};{[TV]|[{I|L}S]}Q[R{I|L}]{I|L}[AG]D{I|L};[{I|L}V][WQ]V{I|L}QS{I|L};[Q{I|L}]REQ[{I|L}V]S{I|L};{[QS]|[NT]}{I|L}[R{I|L}]{I|L}[AG]D{I|L};{[TV]|[{I|L}S]}[AG][R{I|L}]{I|L}QD{I|L};[Q{I|L}]S[R{I|L}]{I|L}QD{I|L} 6.4224;5.5734;5.3519;4.9967;4.5029;4.3267;4.3267;4.1478;4.1113;4.0691 -;-;-;-;-;-;-;-;-;- 461 1 1.213 78591.3 1.0 10043 5613 15646 HBL1_DMSO_200M_050219_1,15658 HBL1_DMSO_200M_050219_1,15658,YILHVLQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15659 76.484 99.0 487370.0 25 0 28319.0 -1 0 72 881.413061892792 1760.811570852384 2 881.4147216677666 MULTI CID FTMS 0 0 0 15646 574225.0625 0.3542316052007529 1 -0.0423583984375 13 3 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 12 -1 68.09 0.0 0.0 3.8669 0.0 0.0 358.227731018347 0.0 358.227731018347 0.0 42.11594022562899 0.0 0.0 0 0.3494850021680094 0.0 0.0 1.2302046884880935 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 3.8669 - 882 + 1 1.213 41623.2 1.0 10044 5613 15646 HBL1_DMSO_200M_050219_1,15659 HBL1_DMSO_200M_050219_1,15659, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15660 76.486 112.0 663620.0 25 0 70351.0 + -1 MLIPLFSV 8 81 468.2691767607116 934.5238005882233 2 468.2690612673759 MULTI CID FTMS 0 0 0 15646 539912.3125 0.1785526461996668 4 -0.311187744140625 14 Oxidation (M) _M(Oxidation (M))LIPLFSV_ REV__ENSG00000043591|ENST00000369295|ADRB1 36.46614268402704 0.2934124525509074 3 {I|L}{M(Oxidation (M))|F}SV 4 -1 38.928 0.0 0.0 4.1655 0.0 0.0 470.2612374644685 0.0 470.2612374644685 0.0 11.4363034371533 0.0 0.0 0 0.5 0.0 0.5 0.0 {I|L}{M(Oxidation (M))|F}SV 4.1655 + + 83 1 1.213 63738.7 1.0 10045 5613 15646 HBL1_DMSO_200M_050219_1,15660 HBL1_DMSO_200M_050219_1,15660,MLIPLFSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15661 76.494 413.0 695350.0 25 0 57898.0 39927 VFSSLLAILRH 11 178 628.3813604498445 1254.7481679664888 2 628.3831054568291 MULTI CID FTMS 0 0 0 15646 522564.3125 0.232229234040038 -3 0.3007583618164062 15 Unmodified _VFSSLLAILRH_ ENST00000544007.5_1_14:31061550-31062714:+|nuORF 6.2057823575117 0.8458686499021061 3 [{M(Oxidation (M))|F}V]SY 4 8 16.485 0.0 0.0 1.3138 0.0 0.0 0.0 755.490806849468 755.490806849468 -1.196790724322657 0.0 -1.196790724322657 0.0 0 0.0 0.4089353929735008 0.8494850021680094 0.0 [{M(Oxidation (M))|F}V]SY 1.3138 - 532 1 1.213 210160.5 1.0 10046 5613 15646 HBL1_DMSO_200M_050219_1,15661 HBL1_DMSO_200M_050219_1,15661,VFSSLLAILRH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15662 76.496 116.0 1011500.0 25 0 161520.0 + 2805 ATVPGLLKV 9 102 449.2918052428793 896.5690575525587 2 449.2921935915947 MULTI CID FTMS 0 0 0 15646 523305.96875 0.2294078977579283 1 -0.0423583984375 16 Unmodified _ATVPGLLKV_ ENSG00000179820|ENST00000391770|MYADM 32.30548876998284 0.1201446275138228 3 [TA]VV[PA]{I|L}KV 9 3 + 39.734 0.0 0.0 4.4318 4.4318 73.283 0.0 0.0 0.0 6.089091603887155 6.062116444453622 6.062116444453622 1.7609125905567993 0 0.5 1.3979400086720375 0.0 0.2215141619232908 [TA]VV[PA]{I|L}KV;[TA]VP{[VA]|[{I|L}G]}{I|L}KV 4.4318;4.2354 -;+ + 197 + 1 1.213 96130.6 1.0 10047 5613 15646 HBL1_DMSO_200M_050219_1,15662 HBL1_DMSO_200M_050219_1,15662,ATVPGLLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15663 76.497 50.0 1676400.0 25 0 220480.0 + 25097 MPYGSLYNV 9 118 522.246698537251 1042.4788441413018 2 522.2471191287041 MULTI CID FTMS 0 0 0 15646 499133.75 0.2134991550543448 -3 0.3007583618164062 17 Unmodified _MPYGSLYNV_ ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-2|ILK;nc|ENSG00000166333|Q13418-3|ILK 53.57557251787612 0.0325303259649373 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GMS{I|L}YNV 9 2 + 52.833 0.0 0.0 5.068 5.068 72.942 0.0 0.0 0.0 9.66621474099405 14.623118091426974 9.66621474099405 0.2815125038364385 0 0.7742275032520141 1.0969100130080565 1.2059771852360797 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GMS{I|L}YNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GS{I|L}MYNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GSM{I|L}YNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GS{I|L}YMNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MGS{I|L}YNV;[TA][MT]{I|L}MYNV;[TA][MT]M{I|L}YNV;[TA][MT]{I|L}YMNV;[YN]NGS{I|L}YNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[VS]MYNV 5.068;5.041;4.9456;4.8383;4.3975;3.8467;3.7513;3.6441;3.4651;3.3648 -;-;-;-;-;-;-;-;-;- 653 1 1.213 73697.2 1.0 10048 5613 15646 HBL1_DMSO_200M_050219_1,15663 HBL1_DMSO_200M_050219_1,15663,MPYGSLYNV True True MPYGSLYNV 76.497491 522.247119128704 31001770.0 15646.0 nc|ENSG00000166333|Q13418-3|ILK;;ENSG00000166333|ENST00000299421|ILK;;nc|ENSG00000166333|Q13418-2|ILK 5.905031522115071 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15664 76.499 62.0 1004500.0 25 0 126760.0 + 16374 IYQEKVLDL 9 102 560.8168714373286 1119.619189941457 2 560.8168212771416 MULTI CID FTMS 0 0 0 15646 424371.5 0.0293480126589439 6 -0.44134521484375 18 Unmodified _IYQEKVLDL_ ENSG00000079616|ENST00000160827|KIF22;nc|ENSG00000079616|Q14807-2|KIF22 53.832793166522166 0.0319663582346103 3 [Y{I|L}]QE 4 5 50.362 0.0 0.0 4.4981 0.0 0.0 0.0 583.3466280572874 583.3466280572874 8.429322168060693 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3807196863200844 0.4247425010840047 + [Y{I|L}]QE 4.4981 + + 377 + 1 1.213 51080.2 1.0 10049 5613 15646 HBL1_DMSO_200M_050219_1,15664 HBL1_DMSO_200M_050219_1,15664,IYQEKVLDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15665 76.502 176.0 745320.0 25 0 93085.0 + 18497 KYPDYEVTW 9 148 600.7823765231306 1199.550200113061 2 600.7823974490166 MULTI CID FTMS 0 0 0 15646 400681.6875 0.19137161497777 -3 0.3007583618164062 19 Unmodified _KYPDYEVTW_ ENSG00000054148|ENST00000247665|PHPT1 43.77239144664712 0.0547478964384323 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EVYKTW 9 6 + 79.381 0.0 0.0 6.6176 6.6176 81.381 0.0 0.0 0.0 8.696662315049934 9.208187539523747 8.696662315049934 2.218487496163561 0 0.9247425010840048 1.2218487496163564 1.110924374808178 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EVYKTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EYKVTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EYVKTW;[DP]YEVYKTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}TV[YG]VTW;[DP]YEYKVTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KYEVTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}T[YR]VTW;[YE]DPVYKTW;[DP]YEYVKTW 6.6176;6.4326;6.0349;5.8926;5.7197;5.7076;5.6133;5.4261;5.414;5.3099 -;-;-;-;-;-;-;-;-;- 2884 1 1.213 97006.0 1.0 10050 5613 15646 HBL1_DMSO_200M_050219_1,15665 HBL1_DMSO_200M_050219_1,15665,KYPDYEVTW True True KYPDYEVTW 76.502439 600.782397449017 30864034.0 15646.0 ENSG00000054148|ENST00000247665|PHPT1 6.045830567677816 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15666 76.507 225.0 642440.0 25 0 50300.0 + 19750 LGPTTLASPV 10 146 478.27677626559415 954.5389995979884 2 478.2767211794853 MULTI CID FTMS 0 0 0 15646 380302.96875 0.2610969634155582 -3 0.3007583618164062 20 Unmodified _LGPTTLASPV_ REV__ENSG00000141096|ENST00000268793|DPEP3 21.74664581756881 0.480091245866545 3 [EP]GA{I|L}VA 7 -1 36.252 0.0 0.0 3.7979 0.0 0.0 0.0 314.16971183847585 314.16971183847585 9.06078228139883 0.0 0.0 0.0 0 0.0 0.638272163982407 0.566901560044258 0.0 [EP]GA{I|L}VA 3.7979 - 1044 1 1.213 116841.8 1.0 10051 5613 15646 HBL1_DMSO_200M_050219_1,15666 HBL1_DMSO_200M_050219_1,15666,LGPTTLASPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15668 76.517 474.0 332100.0 25 0 30985.0 6731 EDLEFRKSMYE 11 138 723.8306472041459 1445.6467414750916 2 723.8314697146416 MULTI CID FTMS 0 0 0 15667 320958.0 0.8796144263310448 1 -0.1573638916015625 1 Unmodified _EDLEFRKSMYE_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF 10.150570793230772 0.8240029794358671 3 [Y{M(Oxidation (M))|F}]AS{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV] 12 10 + 85.505 0.0 0.0 5.9146 5.9146 89.414 0.0 0.0 0.0 46.521417223469086 7.447274948966935 7.447274948966935 13.424226808222071 0 0.5 0.0 1.642642683904553 0.8494850021680094 [Y{M(Oxidation (M))|F}]AS{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV];[QP]K{M(Oxidation (M))|F}TDN{M(Oxidation (M))|F}SA[YE];[Y{M(Oxidation (M))|F}]AS{M(Oxidation (M))|F}GGDT{M(Oxidation (M))|F}V[HV];[PG]AK{M(Oxidation (M))|F}TDN{M(Oxidation (M))|F}SA[YE];{[ES]|[DT]|[{I|L}C]}[RK]TDN{M(Oxidation (M))|F}SA[YE];[QP]K{M(Oxidation (M))|F}TDGG{M(Oxidation (M))|F}SA[YE];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDN{M(Oxidation (M))|F}SA[YE];[PG]AK{M(Oxidation (M))|F}TDGG{M(Oxidation (M))|F}SA[YE];{[ES]|[DT]|[{I|L}C]}[RK]TDGG{M(Oxidation (M))|F}SA[YE];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VEH[KC]{M(Oxidation (M))|F}SA[YE] 5.9146;4.986;4.6977;4.5455;4.374;4.3567;4.3137;3.918;3.7446;3.7343 -;-;-;-;-;-;-;-;-;- 6228 + 1 1.213 112172.7 1.0 10052 5614 15667 HBL1_DMSO_200M_050219_1,15668 HBL1_DMSO_200M_050219_1,15668,EDLEFRKSMYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15669 76.519 65.0 751210.0 25 0 61464.0 + 22597 LPYGLERAI 9 75 516.2964678080378 1030.5783826828756 2 516.2980834841728 MULTI CID FTMS 0 0 0 15667 632409.25 0.2487664869554391 2 -0.1935195922851562 2 Unmodified _LPYGLERAI_ ENSG00000004478|ENST00000001008|FKBP4 24.99096001346401 0.2132109383330889 3 {I|L}PYG{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 9 0 + 55.869 0.0 0.0 5.4211 5.4211 87.226 0.0 0.0 0.0 30.974184576165342 5.201812293369841 5.201812293369841 11.42667503568731 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + {I|L}PYG{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{I|L}PY[W{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{I|L}[WM]{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 5.4211;4.3123;1.2472 +;-;- + 312 + 1 1.213 49917.5 1.0 10053 5614 15667 HBL1_DMSO_200M_050219_1,15669 HBL1_DMSO_200M_050219_1,15669,LPYGLERAI False True LPYGLERAI 76.518791 516.298083484173 47879108.0 15667.0 ENSG00000004478|ENST00000001008|FKBP4 4.882781982421875 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15670 76.527 468.0 881460.0 25 0 88798.0 + 18879 LASYEIKQKI 10 206 596.8488934234282 1191.6832339136563 2 596.8503906130791 MULTI CID FTMS 0 0 0 15667 429166.34375 0.2509639398171451 -2 0.2103042602539062 3 Unmodified _LASYEIKQKI_ REV__ENSG00000174527|ENST00000310903|MYO1H;REV__nc|ENSG00000174527|Q8N1T3-2|MYO1H;REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H;REV__nc|ENSG00000174527|Q8N1T3|MYO1H 10.073929032068715 0.6785112666868882 3 {M(Oxidation (M))|F} 1 -1 9.6041 0.0 0.0 0.80593 0.0 0.0 1026.6040693402172 0.0 1026.6040693402172 0.0 -0.5731938998424368 -0.5731938998424368 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.80593 - 224 + 1 1.213 301552.3 1.0 10054 5614 15667 HBL1_DMSO_200M_050219_1,15670 HBL1_DMSO_200M_050219_1,15670,LASYEIKQKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15671 76.53 136.0 1345500.0 25 0 272050.0 + 22332 LPSLLEELLS 10 127 557.3215062604374 1112.6284595876748 2 557.3240234255791 MULTI CID FTMS 0 0 0 15667 379682.5 0.2032423928465229 -2 0.2103042602539062 4 Unmodified _LPSLLEELLS_ REV__ENSG00000181652|ENST00000639579|ATG9B;REV__nc|ENSG00000181652|Q674R7-2|ATG9B 26.88365393820708 0.3646707531412818 3 [{I|L}P]TG{I|L}P{I|L}TV 9 -1 39.64 0.0 0.0 3.5628 0.0 0.0 0.0 218.0653241719123 218.0653241719123 1.2980207575984082 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.6496498648046138 0.0 [{I|L}P]TG{I|L}P{I|L}TV 3.5628 - 2069 1 1.213 141264.4 1.0 10055 5614 15667 HBL1_DMSO_200M_050219_1,15671 HBL1_DMSO_200M_050219_1,15671,LPSLLEELLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15672 76.538 481.0 771840.0 25 0 87858.0 + 31545 RQLEEEGITFV 11 177 660.8432408738283 1319.6719288144566 2 660.8439819216728 MULTI CID FTMS 0 0 0 15667 364192.21875 0.0694414777641425 -2 0.2103042602539062 5 Unmodified _RQLEEEGITFV_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 64.9267550582149 0.0491502274424461 3 {[VA]|[{I|L}G]}RAEEEG{I|L}T{M(Oxidation (M))|F}V 12 4 + 87.74 0.0 0.0 6.6486 6.6486 77.881 0.0 0.0 0.0 0.1164844391272481 8.593313839463221 0.1164844391272481 0.1164844391272481 0 1.079689690656103 1.0969100130080565 1.7070683865866922 0.2614393726401688 {[VA]|[{I|L}G]}RAEEEG{I|L}T{M(Oxidation (M))|F}V;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EEEG{I|L}T{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}QREEG{I|L}T{M(Oxidation (M))|F}V;[VP]{[CA]|SS}REEG{I|L}T{M(Oxidation (M))|F}V;{[VA]|[{I|L}G]}{[CP]|[EA]}REEG{I|L}T{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[AG]REEG{I|L}T{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}Q[VG]EEG{I|L}T{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}QREW{I|L}T{M(Oxidation (M))|F}V;{[DA]|[EG]}[{I|L}A]REEG{I|L}T{M(Oxidation (M))|F}V;[VP]D[KS]EW{I|L}T{M(Oxidation (M))|F}V 6.6486;6.6398;6.4052;5.8881;5.7135;5.7135;5.7135;5.7088;5.3471;5.2836 -;+;-;-;-;-;-;-;-;- + 9610 1 1.213 267087.2 1.0 10056 5614 15667 HBL1_DMSO_200M_050219_1,15672 HBL1_DMSO_200M_050219_1,15672,RQLEEEGITFV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15673 76.541 144.0 518300.0 25 0 63858.0 29479 QLIRWCLSL 9 103 566.322423852966 1130.630294772732 2 566.3228027224541 MULTI CID FTMS 0 0 0 15667 342431.625 0.1476541426281023 -5 0.409576416015625 6 Unmodified _QLIRWCLSL_ ENSG00000198355|ENST00000360612|PIM3 7.910154910731844 0.6385446671287552 3 {I|L} 1 8 11.783 0.0 0.0 1.0421 0.0 0.0 999.5353526114023 0.0 999.5353526114023 0.0 2.909283026198377 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0421 + + 100 + 1 1.213 66426.9 1.0 10057 5614 15667 HBL1_DMSO_200M_050219_1,15673 HBL1_DMSO_200M_050219_1,15673,QLIRWCLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15674 76.554 732.0 446080.0 25 0 29416.0 + 35597 STVKVLIRL 9 256 343.5657118370894 1027.6753061114682 3 343.5653869509697 MULTI CID FTMS 0 0 0 15667 316720.4375 0.4850057224149261 2 -0.1935195922851562 7 Unmodified _STVKVLIRL_ ENSG00000143621|ENST00000361891|ILF2 53.31671820480216 0.0330978755772958 3 STVKV{I|L}{I|L}{I|L}R 9 2 + 86.951 0.0 0.0 8.4609 8.4609 82.241 0.0 0.0 0.0 29.488474775526186 0.3407978957227726 0.3407978957227726 0.3407978957227726 0 0.9977861090009468 1.3010299956639813 0.0 0.75 STVKV{I|L}{I|L}{I|L}R;STVKV{I|L}{I|L}R{I|L};S{I|L}SKV{I|L}{I|L}{I|L}R;S{I|L}SKV{I|L}{I|L}R{I|L};STVK{I|L}V{I|L}{I|L}R;STVK{I|L}V{I|L}R{I|L};S{I|L}SK{I|L}V{I|L}{I|L}R;S{I|L}SK{I|L}V{I|L}R{I|L};STVK{I|L}{I|L}V{I|L}R;STVK{I|L}{I|L}VR{I|L} 8.4609;8.4278;8.2739;8.2407;7.7976;7.7644;7.6105;7.5773;6.9752;6.9421 -;+;-;-;-;-;-;-;-;- + 408 + 1 1.213 260880.8 1.0 10058 5614 15667 HBL1_DMSO_200M_050219_1,15674 HBL1_DMSO_200M_050219_1,15674,STVKVLIRL True True STVKVLIRL 76.553964 343.56538695097 5690598.5 15667.0 ENSG00000143621|ENST00000361891|ILF2 1.920113613208135 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15675 76.566 697.0 502530.0 25 0 41926.0 19800 LGSVLRPL 8 205 427.7765569961136 853.5385610590273 2 427.7765380740166 MULTI CID FTMS 0 0 0 15667 318992.0625 0.85693842734118 2 -0.1935195922851562 8 Unmodified _LGSVLRPL_ nc|ENSG00000105327|Q96PG8|BBC3 38.15118350030904 0.2652218139009398 3 {[SA]|[TG]}VV{I|L}PR{I|L} 8 4 + 65.843 0.0 0.0 7.7141 7.7141 81.844 0.0 0.0 0.0 23.97940008672037 0.7648373010427179 0.7648373010427179 0.7648373010427179 0 1.0941876774005248 1.6989700043360187 0.0 0.6307196863200843 {[SA]|[TG]}VV{I|L}PR{I|L};{[SA]|[TG]}VV{I|L}{I|L}RP;{[SA]|[TG]}V{I|L}VPR{I|L};{[SA]|[TG]}V{I|L}V{I|L}RP;{[SA]|[TG]}{I|L}VVPR{I|L};{[SA]|[TG]}{I|L}VV{I|L}RP;{[SA]|[TG]}V{I|L}[RP]V{I|L};{[SA]|[TG]}V{I|L}[RP]{I|L}V;{[SA]|[TG]}VV{I|L}{I|L}[RP];{[SA]|[TG]}V{I|L}{I|L}V[RP] 7.7141;7.6245;6.6653;6.5757;5.4623;4.9632;4.1701;4.1701;4.1471;3.7377 -;-;-;-;-;-;-;-;-;- 756 + 1 1.213 270692.4 1.0 10059 5614 15667 HBL1_DMSO_200M_050219_1,15675 HBL1_DMSO_200M_050219_1,15675,LGSVLRPL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15676 76.579 751.0 373660.0 25 0 40286.0 + 21686 LPPPTLRI 8 191 453.7921119878436 905.5696710424872 2 453.7923461794853 MULTI CID FTMS 0 0 0 15667 264220.5 0.0041253471767702 46 -3.697280883789064 9 Unmodified _LPLPTRPL_ ENSG00000221821|ENST00000408925|C6orf226 32.30548876998284 0.3644845974844379 3 {I|L}PPPT[R{I|L}]{I|L} 8 2 + 56.934 0.0 0.0 6.2871 6.2871 91.85 0.0 0.0 0.0 44.460012547612365 1.6875220940089974 1.6875220940089974 23.020894515544164 0 0.7823990236802432 2.0 0.0 0.3807196863200844 {I|L}PPPT[R{I|L}]{I|L};{I|L}P[KS][H{I|L}]V{I|L};{I|L}P[KS][H{I|L}]{I|L}V;{I|L}KYT[R{I|L}]{I|L};{I|L}{I|L}[QA][H{I|L}]V{I|L};{I|L}{I|L}[QA][H{I|L}]{I|L}V 6.2871;3.745;3.4766;0.5123;0.31455;0.046166 -;-;-;-;-;- 446 + 1 1.213 213276.0 1.0 10060 5614 15667 HBL1_DMSO_200M_050219_1,15676 HBL1_DMSO_200M_050219_1,15676,LPLPTRPL False False LPPPTLRI 76.579068 453.792346179485 2503100160.0 15667.0 ENSG00000221821|ENST00000408925|C6orf226 2.11815079053243 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15677 76.593 800.0 886080.0 25 0 102500.0 14306 IELPLTNPEL 10 314 380.2171636094188 1137.6296614284563 3 380.2170287966728 MULTI CID FTMS 0 0 0 15667 236880.140625 0.4065390058202465 -1 0.0423583984375 10 Unmodified _IELPLTNPEL_ ENSG00000100519|ENST00000445930|PSMC6;ENST00000458604.6_1_14:53173986-53184887:+|nuORF;ENST00000557085.1_1_14:53177833-53180694:+|nuORF 36.39500950444726 0.1956349533321693 3 [AG]{I|L}C[NP]P{I|L}Q{I|L}{I|L} 11 8 + 46.996 0.0 0.0 4.1311 4.1311 70.373 0.0 0.0 0.0 6.379818316463314 10.83668578233474 6.379818316463314 0.5102999566398125 0 0.3807196863200844 1.3979400086720375 0.0 0.5501648626366046 [AG]{I|L}C[NP]P{I|L}Q{I|L}{I|L};[AG]{I|L}C[NP]{I|L}PQ{I|L}{I|L};[AG]{I|L}C[NP]{I|L}QP{I|L}{I|L};[AG]{I|L}C[NP]P{I|L}{I|L}Q{I|L};[AG]{I|L}C[NP]{I|L}P{I|L}Q{I|L};[VP][RH]E{M(Oxidation (M))|F}Q{I|L}{I|L};[AG]{I|L}C[NP]P{I|L}[AG]{I|L}{I|L};[AG]{I|L}C[NP]{I|L}P[AG]{I|L}{I|L};[Q{I|L}]C[NP]P{I|L}Q{I|L}{I|L};[VP][RH]E{M(Oxidation (M))|F}{I|L}Q{I|L} 4.1311;4.0862;3.8603;3.7225;3.6776;3.5703;3.3287;3.2838;3.1836;3.1617 -;-;-;-;-;-;-;-;-;- 2737 1 1.213 547390.9 0.9200000166893004 10061 5614 15667 HBL1_DMSO_200M_050219_1,15677 HBL1_DMSO_200M_050219_1,15677,IELPLTNPEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15678 76.596 90.0 714390.0 25 0 82995.0 8146 EPLLVFLL 8 95 472.2948718881397 942.5751908430794 2 472.2870056033134 MULTI CID FTMS 0 0 0 -1 0 11 Unmodified _EPLLVFLL_ ENSG00000135740|ENST00000299798|SLC9A5;ENST00000564704.5_1_16:67289660-67296168:+|nuORF 9.347437153973935 0.7675937258251505 3 [EP]{I|L} 3 5 15.986 0.0 0.0 1.696 0.0 0.0 0.0 600.3716135327857 600.3716135327857 2.0065945054641805 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 + [EP]{I|L} 1.696 + + 82 1 1.213 56648.7 1.0 10062 5614 15667 HBL1_DMSO_200M_050219_1,15678 HBL1_DMSO_200M_050219_1,15678,EPLLVFLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15679 76.602 285.0 658780.0 25 0 44925.0 + 40474 RLLPPGAVVAV 11 168 546.3501745056776 1090.6857960781551 2 546.3503906130791 MULTI CID FTMS 0 0 0 15667 217856.25 0.1536688351737414 17 -1.1296005249023438 12 Unmodified _VIPAPRIVGAV_ ENSG00000142544|ENST00000421832|CTU1 24.020572477871973 0.5281922720044371 3 AVVAV 5 7 42.206 0.0 0.0 3.8697 0.0 0.0 633.3975586885592 0.0 633.3975586885592 0.0 2.502575566210645 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 AVVAV 3.8697 - 1395 1 1.213 152830.3 1.0 10063 5614 15667 HBL1_DMSO_200M_050219_1,15679 HBL1_DMSO_200M_050219_1,15679,VIPAPRIVGAV False False RLLPPGAVVAV 76.601583 546.350390613079 8222339.5 15667.0 ENSG00000142544|ENST00000421832|CTU1 4.044275363286336 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15680 76.606 250.0 655090.0 25 0 71768.0 38769 TVDFYFEEV 9 150 574.7592916255289 1147.5040303178578 2 574.7596313357353 MULTI CID FTMS 0 0 0 15667 216511.1875 0.2535583991893577 17 -1.1296005249023438 13 Unmodified _TVDFYFEEV_ ENSG00000196353|ENST00000429747|CPNE4;nc|ENSG00000196353|Q96A23-2|CPNE4 23.1484247019978 0.2366544122328345 3 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VW 6 6 43.148 0.0 0.0 3.7602 0.0 0.0 0.0 413.0961092584594 413.0961092584594 22.11249690339386 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VW 3.7602 - 422 + 1 1.213 125060.2 1.0 10064 5614 15667 HBL1_DMSO_200M_050219_1,15680 HBL1_DMSO_200M_050219_1,15680,TVDFYFEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15681 76.611 238.0 415490.0 25 0 47706.0 + 44351 KFLSAVLAA 9 139 460.2843050740368 918.5540572148736 2 460.2844726443291 MULTI CID FTMS 0 0 0 15667 194470.890625 0.881574086115368 1 -0.1573638916015625 14 Unmodified _YLQKLLAA_ nc|ENSG00000122126|Q01968-2|OCRL;ENSG00000122126|ENST00000371113|OCRL 24.67388899826682 0.525179942228231 3 [{I|L}A]GYK{I|L}VR 8 6 + 30.232 0.0 0.0 3.2913 3.2913 72.849 0.0 0.0 0.0 2.3248466104710985 14.747596935672505 2.3248466104710985 3.087112013016636 0 0.3494850021680094 0.638272163982407 0.0 0.0 [{I|L}A]GYK{I|L}VR;[Q{I|L}]YK{I|L}VR;[{I|L}A]GYK{I|L}{I|L}AA;{[VA]|[{I|L}G]}AYK{I|L}VR;[Q{I|L}]YK{I|L}{I|L}AA;{[VA]|[{I|L}G]}AYK{I|L}{I|L}AA;[{I|L}A]GYV[K{I|L}]R;{[CT]|[{M(Oxidation (M))|F}G]}{[TV]|[{I|L}S]}K{I|L}VR;{[MS]|[{M(Oxidation (M))|F}A]}[VS]K{I|L}VR;[Q{I|L}]YV[K{I|L}]R 3.2913;2.9552;2.914;2.6157;2.5705;2.2385;0.82442;0.80993;0.57521;0.48834 -;-;-;-;-;-;-;-;-;- 618 1 1.213 79256.8 1.0 10065 5614 15667 HBL1_DMSO_200M_050219_1,15681 HBL1_DMSO_200M_050219_1,15681,YLQKLLAA False False KFLSAVLAA 76.610697 460.284472644329 2287179.25 15667.0 nc|ENSG00000122126|Q01968-2|OCRL;;ENSG00000122126|ENST00000371113|OCRL 2.5777249733606973 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15682 76.615 232.0 605300.0 25 0 48855.0 + 14400 IFIDRDPAAF 10 155 582.8054843593007 1163.5964157854014 2 582.8064453005791 MULTI CID FTMS 0 0 0 15667 181103.75 0.4439944731677812 -2 0.2103042602539062 15 Unmodified _IFIDRDPAAF_ ENSG00000136636|ENST00000259154|KCTD3;nc|ENSG00000136636|Q9Y597-2|KCTD3 51.41523569358685 0.0718446036348414 3 {I|L}{M(Oxidation (M))|F}{I|L}D[RD][PA]A{M(Oxidation (M))|F} 10 0 + 45.639 0.0 0.0 3.9223 3.9223 75.915 0.0 0.0 0.0 5.803622476495463 5.803622476495463 5.803622476495463 4.374854021094947 0 1.774227503252014 0.0 0.3494850021680094 0.0 + + {I|L}{M(Oxidation (M))|F}{I|L}D[RD][PA]A{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}VYYE{I|L}A{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}AWK[NS]{I|L}A{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}VE[RD][PA]A{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}AWK[WK]A{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}AWKQ[VS]A{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}GWKQWA{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[RD]{M(Oxidation (M))|F}{I|L}[PA]A{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}AWK[NS]A{I|L}{M(Oxidation (M))|F};[{I|L}P]WW[MT]{I|L}A{M(Oxidation (M))|F} 3.9223;3.5463;3.4235;3.3216;3.1208;3.0135;2.9302;2.9082;2.8376;2.784 +;-;-;-;-;-;-;-;-;- + 1826 + 1 1.213 108585.1 1.0 10066 5614 15667 HBL1_DMSO_200M_050219_1,15682 HBL1_DMSO_200M_050219_1,15682,IFIDRDPAAF True True IFIDRDPAAF 76.615068 582.806445300579 7074733.5 15667.0 nc|ENSG00000136636|Q9Y597-2|KCTD3;;ENSG00000136636|ENST00000259154|KCTD3 6.441757996877034 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15683 76.621 326.0 379490.0 25 0 62414.0 + 19960 TPRTAALAL 9 159 457.2713009316498 912.5280489300995 2 457.7788574099541 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _LIGDGVGGIL_ ENSG00000106771|ENST00000374586|TMEM245;nc|ENSG00000106771|Q9H330-4|TMEM245 16.942295170755138 0.5632667538960775 3 AM{I|L}[HK]A{I|L} 7 9 19.927 0.0 0.0 2.1838 0.0 0.0 130.0849469787309 0.0 130.0849469787309 0.0 8.50739919359663 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 AM{I|L}[HK]A{I|L} 2.1838 - 779 + 1 1.213 94933.2 1.0 10067 5614 15667 HBL1_DMSO_200M_050219_1,15683 HBL1_DMSO_200M_050219_1,15683,LIGDGVGGIL False False TPRTAALAL 76.620997 457.778857409954 165680512.0 15667.0 ENSG00000106771|ENST00000374586|TMEM245;;nc|ENSG00000106771|Q9H330-4|TMEM245 1.2722102211167414 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15684 76.635 800.0 420320.0 25 0 33047.0 + 4395 DAVQLNVI 8 303 436.2477972342146 870.4810415352292 2 436.2476379275322 MULTI CID FTMS 0 0 0 15667 129122.4765625 0.0550613870506306 6 -0.4736557006835937 17 Unmodified _DAVQLNVI_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 25.399314129420983 0.5099049743284904 3 {[DA]|[EG]}VQ{I|L}{I|L}VN 8 2 + 34.334 0.0 0.0 3.9443 3.9443 79.331 0.0 0.0 0.0 5.745397123361968 9.988962955951235 5.745397123361968 7.7815125038364386 0 0.0 1.3010299956639813 0.0 0.0 {[DA]|[EG]}VQ{I|L}{I|L}VN;[VG]EQ{I|L}{I|L}VN;{[DA]|[EG]}V[AG]{I|L}{I|L}VN;{[DA]|[EG]}VQ{I|L}N[{I|L}V];[VG]AQ[VG]E[{I|L}V];[KC]KRHS{I|L};[VG]E[AG]{I|L}{I|L}VN;[VG]A{[DA]|[EG]}{I|L}{I|L}VN;[VG]EQ{I|L}N[{I|L}V];[Q{I|L}]N[VG]E[{I|L}V] 3.9443;3.0503;2.8802;2.4869;2.0564;1.9902;1.9863;1.784;1.593;1.5489 -;-;-;+;-;-;-;-;-;- + 1246 1 1.213 253500.8 0.7300000190734863 10068 5614 15667 HBL1_DMSO_200M_050219_1,15684 HBL1_DMSO_200M_050219_1,15684,DAVQLNVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15685 76.65 800.0 153410.0 25 0 14348.0 -1 0 139 914.9442897293562 1827.8740265255124 2 915.4472534060478 MULTI CID FTMS 0 0 0 15667 115560.546875 0.7591914946121745 -3 0.2543411254882812 18 3 {[DA]|[EG]}VA{I|L}{I|L}SD{I|L} 9 -1 40.855 0.0 0.0 2.2351 0.0 0.0 0.0 927.3865747034998 927.3865747034998 23.30452706822257 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.6139829889124311 0.0 {[DA]|[EG]}VA{I|L}{I|L}SD{I|L} 2.2351 - 12810 1 1.213 79866.1 0.8700000047683716 10069 5614 15667 HBL1_DMSO_200M_050219_1,15685 HBL1_DMSO_200M_050219_1,15685, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15686 76.661 636.0 392770.0 25 0 42763.0 14447 IFSFFYTMA 9 159 563.7684120168806 1125.522271100561 2 563.7684203982353 MULTI CID FTMS 0 0 0 15667 128381.1640625 0.1140362454075412 4 -0.3074874877929687 19 Unmodified _IFSFFYTMA_ ENSG00000143028|ENST00000369872|SYPL2;nc|ENSG00000143028|Q5VXT5-2|SYPL2 21.74664581756881 0.2544899275067181 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSRVETMA 10 5 + 50.989 0.0 0.0 4.5303 4.5303 72.193 0.0 0.0 0.0 5.840970627320331 8.65479093331686 5.840970627320331 0.8112777287837645 0 0.3182503180159344 1.6989700043360187 0.8243923658886186 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSRVETMA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSRVTMEA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{[QD]|[EN]|[WG]|[KD]|[RS]}ETMA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}{[QC]|[C(Carbamidomethyl (C))A]}MEA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{[QD]|[EN]|[WG]|[KD]|[RS]}TMEA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSRVTEMA;VVS{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}ETMA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{[QD]|[EN]|[WG]|[KD]|[RS]}EVTMA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]VETMA;VVS{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}TMEA 4.5303;4.4582;4.2574;4.1853;4.1853;4.0305;4.0113;3.9801;3.9584;3.9392 -;-;-;-;-;-;-;-;-;- 6420 1 1.213 195327.8 1.0 10070 5614 15667 HBL1_DMSO_200M_050219_1,15686 HBL1_DMSO_200M_050219_1,15686,IFSFFYTMA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15687 76.664 169.0 308820.0 25 0 25346.0 22681 LQAKPDLPVSL 11 104 590.8482621041803 1179.6819712751603 2 590.8473998904228 MULTI CID FTMS 0 0 0 15667 114703.859375 0.0704133834794397 -9 0.661712646484375 20 Unmodified _LQAKPDLPVSL_ ENST00000556522.5_1_14:52294504-52344361:+|nuORF 4.897010918128616 0.8520435188433833 3 Y 1 11 12.474 0.0 0.0 1.0574 0.0 0.0 998.6074911499636 0.0 998.6074911499636 0.0 2.2931892451282465 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0574 - 141 + 1 1.213 43924.8 1.0 10071 5614 15667 HBL1_DMSO_200M_050219_1,15687 HBL1_DMSO_200M_050219_1,15687,LQAKPDLPVSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15689 76.668 15.0 4031800.0 25 0 405270.0 + 41007 VMAPRTVLL 9 75 500.3044224539547 998.5942919747094 2 500.3048583865166 MULTI CID FTMS 0 0 0 15688 3484779.25 0.0641250661532901 8 -0.6208114624023438 1 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 22.736283301280096 0.2418982879461534 3 VMA 3 6 46.44 0.0 0.0 4.6506 0.0 0.0 0.0 694.425917148789 694.425917148789 10.81781054871756 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + VMA 4.6506 + + 323 + 1 1.211 51449.3 1.0 10072 5615 15688 HBL1_DMSO_200M_050219_1,15689 HBL1_DMSO_200M_050219_1,15689,VMAPRTVLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15690 76.67 15.0 2665200.0 25 0 614200.0 + -1 PGKVVCHRLR 10 53 611.3559007792654 1220.6972486253308 2 611.3561889529228 MULTI CID FTMS 0 0 0 15688 3688032.5 0.9651714361496176 -1 0.1573638916015625 2 Carbamidomethyl (C) _PGKVVC(Carbamidomethyl (C))HRLR_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 1.4819007175156935 0.719781833666733 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.211 36614.4 1.0 10073 5615 15688 HBL1_DMSO_200M_050219_1,15690 HBL1_DMSO_200M_050219_1,15690,PGKVVCHRLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15691 76.671 6.9 4392900.0 25 0 836540.0 + 34719 SPYHGFTIV 9 58 510.7620423789908 1019.5095318247816 2 510.7618286013603 MULTI CID FTMS 0 0 0 15688 4120550.0 0.6074188968150733 -1 0.1573638916015625 3 Unmodified _SPYHGFTIV_ ENSG00000272886|ENST00000610213|DCP1A;nc|ENSG00000272886|Q9NPI6-2|DCP1A 16.942295170755138 0.3780752226737986 3 {M(Oxidation (M))|F}YTT{I|L}V 6 5 31.56 0.0 0.0 3.0956 0.0 0.0 277.1425038068375 0.0 277.1425038068375 0.0 16.95554701812867 0.0 0.0 0 0.6549471895720985 0.0 0.5 0.0 {M(Oxidation (M))|F}YTT{I|L}V 3.0956 - 48 1 1.211 29031.9 1.0 10074 5615 15688 HBL1_DMSO_200M_050219_1,15691 HBL1_DMSO_200M_050219_1,15691,SPYHGFTIV False True SPYHGFTIV 76.670765 510.76182860136 49121984.0 15688.0 ENSG00000272886|ENST00000610213|DCP1A;;nc|ENSG00000272886|Q9NPI6-2|DCP1A 6.45553731918335 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15692 76.672 12.0 4301400.0 25 0 1100600.0 + 32244 RWPDYVREL 9 47 617.3225132351072 1232.6304735370145 2 617.3227416872978 MULTI CID FTMS 0 0 0 15688 3800697.25 0.722990327212948 -1 0.1573638916015625 4 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 21.59015148037692 0.2564810811560323 3 {I|L}{M(Oxidation (M))|F}[RV]Y[DP]W 8 8 41.247 0.0 0.0 3.3463 0.0 0.0 0.0 153.07842432193596 153.07842432193596 35.76274388132951 0.0 0.0 0.0 0 1.805462187404089 0.0 0.0 0.3807196863200844 {I|L}{M(Oxidation (M))|F}[RV]Y[DP]W 3.3463 - 59 + 1 1.211 44598.1 1.0 10075 5615 15688 HBL1_DMSO_200M_050219_1,15692 HBL1_DMSO_200M_050219_1,15692,RWPDYVREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15693 76.673 22.0 2648300.0 25 0 280230.0 + 32254 RWPDYVREL 9 62 411.88404851646834 1232.630316149605 3 411.8839904665947 MULTI CID FTMS 0 0 0 15688 1962001.375 0.737131854649873 -1 0.1573638916015625 5 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 34.93206674587334 0.1032771302489716 3 [WR]PDY 5 4 42.007 0.0 0.0 3.4079 0.0 0.0 0.0 512.2841667261883 512.2841667261883 21.957640437841874 0.0 0.0 0.0 0 1.3182503180159344 1.6989700043360187 0.3807196863200844 0.3054621874040891 + [WR]PDY 3.4079 + + 92 1 1.211 51939.2 1.0 10076 5615 15688 HBL1_DMSO_200M_050219_1,15693 HBL1_DMSO_200M_050219_1,15693,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15694 76.674 20.0 2119700.0 25 0 170650.0 + 41457 VPLPAENVTI 10 78 526.8031801936137 1051.5918074540273 2 526.8040038943291 MULTI CID FTMS 0 0 0 15688 1865464.125 0.3955542546860722 3 -0.1501235961914062 6 Unmodified _VPLPAENVTI_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 29.081581746732265 0.3152867722954398 3 NV[{I|L}P]VT{I|L} 7 5 32.223 0.0 0.0 3.0642 0.0 0.0 297.1330738751969 0.0 297.1330738751969 0.0 16.738569581344507 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.6549471895720984 NV[{I|L}P]VT{I|L} 3.0642 - 233 1 1.211 41367.4 1.0 10077 5615 15688 HBL1_DMSO_200M_050219_1,15694 HBL1_DMSO_200M_050219_1,15694,VPLPAENVTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15695 76.675 21.0 1221600.0 25 0 119800.0 + 2724 ATGEVKKGYL 10 53 533.2987637996065 1064.582974666013 2 533.2968017458916 MULTI CID FTMS 0 0 0 15688 1808247.375 0.6575502983980859 -1 0.1573638916015625 7 Unmodified _ATGEVKKGYL_ REV__ENSG00000125730|ENST00000245907|C3 13.042465956692816 0.6287021003332052 3 Y{I|L} 2 -1 22.206 0.0 0.0 2.0859 0.0 0.0 770.4298573224625 0.0 770.4298573224625 0.0 7.284700126913391 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 Y{I|L} 2.0859 + + 21 1 1.211 29837.0 1.0 10078 5615 15688 HBL1_DMSO_200M_050219_1,15695 HBL1_DMSO_200M_050219_1,15695,ATGEVKKGYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15696 76.677 34.0 1275600.0 25 0 95166.0 -1 VGARDLFMASC 11 73 593.2727617766487 1184.5309706200974 2 593.2734863162041 MULTI CID FTMS 0 0 0 15688 1593818.125 1.0 0 0.0 8 Oxidation (M) _VGARDLFM(Oxidation (M))ASC_ nc|ENSG00000143951|O95876-2|WDPCP 9.5439744041441 0.8301188422821563 3 {M(Oxidation (M))|F}{I|L}D 3 -1 17.703 0.0 0.0 1.4945 0.0 0.0 426.12286977149057 380.2034700983032 806.3263398697937 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}D 1.4945 - 31 + 1 1.211 41403.5 1.0 10079 5615 15688 HBL1_DMSO_200M_050219_1,15696 HBL1_DMSO_200M_050219_1,15696,VGARDLFMASC False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15697 76.678 30.0 646230.0 25 0 102740.0 + 13012 HARVRLMLRS 10 46 619.8693062180286 1237.724059502857 2 619.8696777224541 MULTI CID FTMS 0 0 0 15688 1405917.875 0.5175890702806263 -1 0.1573638916015625 9 Unmodified _HARVRLMLRS_ REV__ENST00000522456.1_2_7:27153247-27153442:-|nuORF 1.6526216038709556 0.7189921496796233 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.211 22248.9 1.0 10080 5615 15688 HBL1_DMSO_200M_050219_1,15697 HBL1_DMSO_200M_050219_1,15697,HARVRLMLRS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15698 76.679 30.0 1227800.0 25 0 102370.0 10583 FVIRNIVEA 9 68 530.8111930196629 1059.6078331061258 2 530.8112060427666 MULTI CID FTMS 0 0 0 15688 1054465.375 0.0371444669905709 11 -0.7383880615234375 10 Unmodified _FVIRNIVEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 28.486842064014134 0.1687311288560894 3 {I|L}V{[CP]|[EA]} 4 5 18.698 0.0 0.0 1.7646 0.0 0.0 629.3660755841812 0.0 629.3660755841812 0.0 6.223637474483468 0.0 0.0 0 0.25 0.0 0.0 0.0 + {I|L}V{[CP]|[EA]} 1.7646 + + 24 1 1.211 36241.4 1.0 10081 5615 15688 HBL1_DMSO_200M_050219_1,15698 HBL1_DMSO_200M_050219_1,15698,FVIRNIVEA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15699 76.68 47.0 1261200.0 25 0 189140.0 40699 VLGFALIV 8 74 416.2705509744676 830.5265490157352 2 416.2705261111259 MULTI CID FTMS 0 0 0 15688 1090545.125 0.0835464906448273 -5 0.5004806518554688 11 Unmodified _VLGFALIV_ ENSG00000091262|ENST00000205557|ABCC6;ENST00000574094.5_1_16:16275679-16317348:-|nuORF;nc|ENSG00000091262|O95255-3|ABCC6 32.45364647766026 0.3613649037604678 3 [{I|L}V]PKY{I|L}V 7 4 + 37.095 0.0 0.0 4.4664 4.4664 79.716 0.0 0.0 0.0 10.18356094367519 3.5948515766379074 3.5948515766379074 6.488051416994143 0 0.6549471895720985 2.0 0.0 0.0 [{I|L}V]PKY{I|L}V;[Y{I|L}]KPV{I|L}V;[KP]{I|L}YV{I|L}V;[{I|L}P]VKY{I|L}V 4.4664;3.6852;2.7738;1.2374 -;-;-;- 95 + 1 1.211 53148.9 1.0 10082 5615 15688 HBL1_DMSO_200M_050219_1,15699 HBL1_DMSO_200M_050219_1,15699,VLGFALIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15700 76.682 48.0 890680.0 25 0 70835.0 + 32167 RVSEFFMNA 9 63 550.7635271536994 1099.5125013741988 2 550.7636596560478 MULTI CID FTMS 0 0 0 15688 1052580.625 0.755715807286768 -1 0.1573638916015625 12 Unmodified _RVSEFFMNA_ ENSG00000071243|ENST00000315870|ING3;nc|ENSG00000071243|Q9NXR8-2|ING3;nc|ENSG00000071243|Q9NXR8-3|ING3 26.268140514670165 0.1969607489560049 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}M{[QG]|[NA]} 9 4 + 29.199 0.0 0.0 2.6556 2.6556 68.703 0.0 0.0 0.0 0.742946587693968 18.74098423245101 0.742946587693968 1.4612803567823818 0 0.9247425010840048 0.0 0.3807196863200844 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}M{[QG]|[NA]};{[TV]|[{I|L}S]}[RD]{M(Oxidation (M))|F}{M(Oxidation (M))|F}M{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}[QT]{M(Oxidation (M))|F}{M(Oxidation (M))|F}M{[QG]|[NA]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV]{[QD]|[EN]|[WG]|[KD]|[RS]}M{[QG]|[NA]};[KC]M{[QS]|[NT]}[YV]{[QN]|[E{I|L}]|[KN]} 2.6556;2.5227;2.3818;1.224;0.036709 -;-;-;-;- 77 1 1.211 38552.9 1.0 10083 5615 15688 HBL1_DMSO_200M_050219_1,15700 HBL1_DMSO_200M_050219_1,15700,RVSEFFMNA False True RVSEFFMNA 76.681586 550.763659656048 7872035.5 15688.0 nc|ENSG00000071243|Q9NXR8-2|ING3;;ENSG00000071243|ENST00000315870|ING3;;nc|ENSG00000071243|Q9NXR8-3|ING3 7.622662703196208 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15701 76.683 30.0 1063400.0 25 0 51470.0 + -1 PLMLLQVPM 9 75 537.290713953186 1072.566874973172 2 537.2874023318291 MULTI CID FTMS 0 0 0 15688 1020351.8125 0.5422122816961434 -10 0.8190765380859375 13 2 Oxidation (M) _PLM(Oxidation (M))LLQVPM(Oxidation (M))_ REV__ENST00000344692.7_1_8:144356972-144357419:+|nuORF 24.67388899826682 0.2172451872415813 3 [{I|L}P]K 3 -1 18.161 0.0 0.0 1.6932 0.0 0.0 0.0 731.3127910710813 731.3127910710813 5.6863623584101255 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}P]K 1.6932 - 55 1 1.211 31621.2 1.0 10084 5615 15688 HBL1_DMSO_200M_050219_1,15701 HBL1_DMSO_200M_050219_1,15701,PLMLLQVPM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15702 76.684 54.0 425170.0 25 0 33587.0 -1 FIVVCERKL 9 55 582.3351836576426 1162.655814382085 2 582.3337890505791 MULTI CID FTMS 0 0 0 15688 714929.4375 0.3136108994272307 -10 0.8190765380859375 14 Carbamidomethyl (C) _FIVVC(Carbamidomethyl (C))ERKL_ ENST00000520859.5_1_8:91017683-91017779:+|nuORF 7.910154910731844 0.6385446671287552 3 {M(Oxidation (M))|F} 1 -1 13.979 0.0 0.0 1.2024 0.0 0.0 997.5764667031772 0.0 997.5764667031772 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2024 + + 16 + 1 1.211 23883.6 1.0 10085 5615 15688 HBL1_DMSO_200M_050219_1,15702 HBL1_DMSO_200M_050219_1,15702,FIVVCERKL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15703 76.685 45.0 882350.0 25 0 54302.0 -1 0 72 675.3932072708664 674.3859308042663 1 675.3918945193291 MULTI CID FTMS 0 0 0 15688 666849.625 0.6694385950866734 -2 0.1997222900390625 15 3 {[TV]|[{I|L}S]}{I|L}ET{I|L} 6 -1 + 69.645 0.0 0.0 10.327 10.327 93.873 0.0 0.0 0.0 23.46787486224656 51.57288017096553 23.46787486224656 8.57840941039747 0 1.3441876774005248 1.6989700043360187 0.3807196863200844 0.0 {[TV]|[{I|L}S]}{I|L}ET{I|L};{[TV]|[{I|L}S]}{I|L}TE{I|L};[{I|L}T]VET{I|L};{[ET]|[MV]}{I|L}VT{I|L};[{I|L}T]EVT{I|L};{[ET]|[MV]}{I|L}{I|L}S{I|L};[{I|L}T]VTE{I|L};[{I|L}T]E{I|L}S{I|L} 10.327;9.0551;6.0365;5.8845;5.7265;4.8736;4.7645;4.7156 -;-;-;-;-;-;-;- 145 1 1.211 34883.9 1.0 10086 5615 15688 HBL1_DMSO_200M_050219_1,15703 HBL1_DMSO_200M_050219_1,15703, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15704 76.687 56.0 360930.0 25 0 43597.0 + -1 MLTECLWLM 9 44 606.7764164884164 1211.5382800436328 2 606.7766601443291 MULTI CID FTMS 0 0 0 15688 698595.5625 0.9925940377732668 -1 0.1573638916015625 16 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LTEC(Carbamidomethyl (C))LWLM_ REV__ENST00000340001.8_1_17:66985250-66987006:-|nuORF 8.593279151180031 0.6146971463335029 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T 3 -1 16.967 0.0 0.0 1.4005 0.0 0.0 0.0 847.3512432606827 847.3512432606827 1.4828069691076031 0.0 0.0 0.0 0 0.0 1.154901959985743 0.4247425010840047 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T 1.4005 + + 31 1 1.211 21753.4 1.0 10087 5615 15688 HBL1_DMSO_200M_050219_1,15704 HBL1_DMSO_200M_050219_1,15704,MLTECLWLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15705 76.689 83.0 739960.0 25 0 86126.0 + 27150 VTITGIVKV 9 90 465.2765336199419 928.538514306684 2 465.2751037478447 MULTI CID FTMS 0 0 0 15688 614640.125 0.2702790308099519 -4 0.4117050170898437 17 Unmodified _PFQKLPTV_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8 23.1484247019978 0.5573009939494978 3 VEK{I|L}PS{I|L} 7 5 26.311 0.0 0.0 2.8335 0.0 0.0 144.06117163265884 0.0 144.06117163265884 0.0 5.49835832086394 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 VEK{I|L}PS{I|L} 2.8335 - 321 + 1 1.211 55523.1 1.0 10088 5615 15688 HBL1_DMSO_200M_050219_1,15705 HBL1_DMSO_200M_050219_1,15705,PFQKLPTV False False VTITGIVKV 76.68869 465.275103747845 15291409.0 15688.0 ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;nc|ENSG00000125885|Q9UJA3-2|MCM8 5.529808044433594 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15706 76.69 67.0 742220.0 25 0 108380.0 + 123 AALDFKLAAA 10 85 495.7857171081895 989.556881283179 2 495.7856323122978 MULTI CID FTMS 0 0 0 15688 614884.5625 1.0 0 0.0 18 Unmodified _AALDFKLAAA_ ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-2|ANKHD1;nc|ENSG00000131503|Q8IWZ3-3|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-5|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1 27.628801355627647 0.3479284626772844 3 AA{I|L}K{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 7 5 43.906 0.0 0.0 4.4369 0.0 0.0 0.0 196.1001767762306 196.1001767762306 25.06961951313705 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.0 0.0 AA{I|L}K{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 4.4369 - 423 1 1.211 43407.5 1.0 10089 5615 15688 HBL1_DMSO_200M_050219_1,15706 HBL1_DMSO_200M_050219_1,15706,AALDFKLAAA False True AALDFKLAAA 76.690284 495.785632312298 5545744.5 15688.0 nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-5|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-3|ANKHD1;;ENSG00000131503|ENST00000360839|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-2|ANKHD1 3.8053075472513833 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15707 76.692 56.0 1042400.0 25 0 79747.0 + 2431 AQRFGEVSL 9 109 503.7702303152252 1005.5259076972504 2 504.2736694216728 MULTI CID FTMS 0 0 0 15688 397388.8125 0.1868900565012669 -5 0.5004806518554688 19 Unmodified _AQRFGEVSL_ REV__ENSG00000161896|ENST00000293756|IP6K3 12.531546534597751 0.4974689918368763 3 PTV 3 -1 14.358 0.0 0.0 1.4279 0.0 0.0 690.3466912439285 0.0 690.3466912439285 0.0 0.8929227063829455 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 PTV 1.4279 - 241 + 1 1.211 48268.3 1.0 10090 5615 15688 HBL1_DMSO_200M_050219_1,15707 HBL1_DMSO_200M_050219_1,15707,AQRFGEVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15708 76.7 495.0 562370.0 25 0 87913.0 + + 20569 ILLDERGQIKL 11 154 432.9338057776429 1295.7795879331288 3 433.2661620974541 MULTI CID FTMS 0 0 0 15688 380953.875 0.4517410478148272 -8 0.6918411254882812 20 Unmodified _LLNLLTQIQQL_ ENST00000468058.1_1_19:7975099-7977313:+|nuORF;nc|ENSG00000076984|O14733-3|MAP2K7;nc|ENSG00000076984|O14733-2|MAP2K7;nc|ENSG00000076984|O14733-4|MAP2K7;ENSG00000076984|ENST00000397979|MAP2K7 6.623454094837244 0.8438980474264925 3 {I|L}{I|L}W[NG]D{I|L}{I|L}K 9 -1 32.06 0.0 0.0 2.4742 0.0 0.0 0.0 240.1633615898376 240.1633615898376 5.594399836060774 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.5994850021680094 {I|L}{I|L}W[NG]D{I|L}{I|L}K 2.4742 - 1181 1 1.211 237937.8 1.0 10091 5615 15688 HBL1_DMSO_200M_050219_1,15708 HBL1_DMSO_200M_050219_1,15708,LLNLLTQIQQL False False ILLDERGQIKL 76.70044 433.266162097454 8763743.5 15688.0 ENST00000468058.1_1_19:7975099-7977313:+|nuORF;;nc|ENSG00000076984|O14733-3|MAP2K7;;nc|ENSG00000076984|O14733-2|MAP2K7;;nc|ENSG00000076984|O14733-4|MAP2K7;;ENSG00000076984|ENST00000397979|MAP2K7 2.4253507455190024 3.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15710 76.708 316.0 246900.0 25 0 15602.0 + -1 FFFYCLFCFVI 11 93 781.8654437229735 1561.716334512747 2 781.8666259646416 MULTI CID FTMS 0 0 0 15709 485308.125 1.0 0 0.0 1 2 Carbamidomethyl (C) _FFFYC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))FVI_ REV__ENSG00000164197|ENST00000389100|RNF180 3.5964929083625545 0.858179447565866 3 [HD]EAQQNA{M(Oxidation (M))|F}YQV{I|L} 13 -1 + 86.988 0.0 0.0 5.57 5.57 76.783 0.0 0.0 0.0 1.479400086720375 1.505794541017636 1.479400086720375 1.479400086720375 0 0.9731975075880328 0.0 0.3252574989159953 1.6549471895720984 [HD]EAQQNA{M(Oxidation (M))|F}YQV{I|L};{[CT]|[{M(Oxidation (M))|F}G]}T{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQV{I|L};{[SA]|[TG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}YQV{I|L};[HD]EA[AG]QNA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[HD]EAQQGGA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QNA{M(Oxidation (M))|F}YQV{I|L};{[CT]|[{M(Oxidation (M))|F}G]}T{M(Oxidation (M))|F}QQGGA{M(Oxidation (M))|F}YQV{I|L} 5.57;5.4753;5.2645;5.2026;4.9891;4.9891;4.9891;4.9891;4.9477;4.8944 -;-;-;-;-;-;-;-;-;- 2210 1 1.211 58124.7 1.0 10092 5616 15709 HBL1_DMSO_200M_050219_1,15710 HBL1_DMSO_200M_050219_1,15710,FFFYCLFCFVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15711 76.71 83.0 703310.0 25 0 139230.0 28940 QAVPLRVVNRK 11 87 640.4024143887543 1278.7902758443086 2 640.4029418826103 MULTI CID FTMS 0 0 0 15709 1318630.625 1.0 0 0.0 2 Unmodified _QAVPLRVVNRK_ ENSG00000006071|ENST00000389817|ABCC8;nc|ENSG00000006071|Q09428-2|ABCC8 8.745405648335112 0.8338865417133445 3 [{I|L}P]NA{I|L}A 6 9 48.377 0.0 0.0 3.783 0.0 0.0 0.0 696.4411907215148 696.4411907215148 31.465912507003605 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 1.075257498915995 [{I|L}P]NA{I|L}A 3.783 - 230 1 1.211 50308.3 1.0 10093 5616 15709 HBL1_DMSO_200M_050219_1,15711 HBL1_DMSO_200M_050219_1,15711,QAVPLRVVNRK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15712 76.712 68.0 621220.0 25 0 61621.0 + -1 LSGLVMSLLTV 11 73 574.8354535289292 1147.6563541246585 2 574.8353759646416 MULTI CID FTMS 0 0 0 15709 682316.5625 0.9389878292695136 -2 0.1935195922851562 3 Oxidation (M) _LSGLVM(Oxidation (M))SLLTV_ REV__ENSG00000198855|ENST00000552695|FICD 8.745405648335112 0.8338865417133445 3 {[TV]|[{I|L}S]}{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]{I|L}D 8 -1 21.872 0.0 0.0 1.9058 0.0 0.0 0.0 300.19093599405204 300.19093599405204 5.674100046527354 0.0 0.0 0.0 0 0.0 2.0 0.2742275032520141 0.0 {[TV]|[{I|L}S]}{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]{I|L}D 1.9058 - 66 1 1.211 38162.6 1.0 10094 5616 15709 HBL1_DMSO_200M_050219_1,15712 HBL1_DMSO_200M_050219_1,15712,LSGLVMSLLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15713 76.713 57.0 841750.0 25 0 98298.0 31417 RPLAACLL 8 62 428.7554575507965 855.496362168393 2 428.7556030154228 MULTI CID FTMS 0 0 0 15709 668163.8125 1.0 0 0.0 4 Unmodified _RPLAACLL_ ENST00000294072.8_2_11:61117452-61117836:-|nuORF;ENST00000294072.8_2_11:61117452-61117836:-|nuORF 6.354104778181461 0.7857632046190106 3 RP{I|L} 3 5 27.58 0.0 0.0 3.2239 0.0 0.0 0.0 486.24802576236567 486.24802576236567 24.815782661239485 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 + RP{I|L} 3.2239 + + 17 + 1 1.211 43723.9 1.0 10095 5616 15709 HBL1_DMSO_200M_050219_1,15713 HBL1_DMSO_200M_050219_1,15713,RPLAACLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15714 76.718 261.0 216110.0 25 0 39207.0 22834 LRRKKITYFL 10 71 669.4215272506557 1336.8285015681113 2 669.9243041872978 MULTI CID FTMS 0 0 0 15709 559394.375 1.0 0 0.0 5 Unmodified _LRRKKITYFL_ ENST00000327892.12_1_6:30688208-30688256:+|nuORF 1.844237919475145 0.7181058121064529 3 [DN][{I|L}V]D{I|L} 6 8 14.045 0.0 0.0 1.0506 0.0 0.0 0.0 664.4597020898487 664.4597020898487 1.2804699004090931 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6139829889124311 [DN][{I|L}V]D{I|L} 1.0506 - 40 1 1.211 47906.5 1.0 10096 5616 15709 HBL1_DMSO_200M_050219_1,15714 HBL1_DMSO_200M_050219_1,15714,LRRKKITYFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15715 76.719 44.0 308210.0 25 0 38380.0 + 3499 CLRLSPALLFN 11 42 623.8536766059576 0 623.8542968630791 PEAK CID FTMS 0 0 0 15709 396308.03125 1.0 0 0.0 6 Unmodified _CLRLSPALLFN_ REV__chr2:65031259-65037610|29|10.59|0.12|6.41|+|0|LINC02576,LINC02576|1 1.3295316138638542 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.211 18086.5 1.0 10097 5616 15709 HBL1_DMSO_200M_050219_1,15715 HBL1_DMSO_200M_050219_1,15715,CLRLSPALLFN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15716 76.721 96.0 547650.0 25 0 38076.0 2760 ATLYFALP 8 104 448.250249588712 894.4859462442239 2 448.2509948611259 MULTI CID FTMS 0 0 0 15709 304349.84375 1.0 0 0.0 7 Unmodified _ATLYFALP_ ENSG00000151892|ENST00000355422|GFRA1;nc|ENSG00000151892|P56159-2|GFRA1 9.347437153973935 0.7675937258251505 3 [TA]V 3 6 15.828 0.0 0.0 1.7695 0.0 0.0 0.0 620.3091633675239 620.3091633675239 4.859275676862509 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.7302046884880937 0.0 [TA]V 1.7695 - 98 1 1.211 46032.6 1.0 10098 5616 15709 HBL1_DMSO_200M_050219_1,15716 HBL1_DMSO_200M_050219_1,15716,ATLYFALP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15717 76.727 338.0 447950.0 25 0 12151.0 23263 LSVPRDWKFL 10 160 630.8599473656542 0 630.8595458865166 PEAK CID FTMS 0 0 0 15709 266923.0 1.0 0 0.0 8 Unmodified _LSVPRDWKFL_ ENSG00000211456|ENST00000389061|SACM1L;ENST00000464102.5_1_3:45776682-45785158:+|nuORF;ENST00000485311.1_1_3:45779316-45781222:+|nuORF;nc|ENSG00000211456|Q9NTJ5-2|SACM1L 12.240655878213236 0.3578162629684178 3 S 1 9 5.7268 0.0 0.0 0.45462 0.0 0.0 1037.6044944854114 132.04580103092033 1169.6502955163317 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1747425010840047 0.0 + S 0.45462 + + 97 + 1 1.211 116526.9 1.0 10099 5616 15709 HBL1_DMSO_200M_050219_1,15717 HBL1_DMSO_200M_050219_1,15717,LSVPRDWKFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15718 76.729 43.0 564480.0 25 0 42041.0 + -1 LTCIIGKYI 9 64 540.809208703978 1079.603864474756 2 540.8090087771416 MULTI CID FTMS 0 0 0 15709 257838.609375 1.0 0 0.0 9 Carbamidomethyl (C) _LTC(Carbamidomethyl (C))IIGKYI_ REV__chr1:150757980-150759240|13|34.85|0.75|5.53|-|2|TE_info:L1MEi,L1MEi_dup180,L1,LINE,donor,-,150759240,150759640|CTSS,None|1 7.289230182591677 0.6602208344931196 3 [{I|L}T]H 3 -1 31.695 0.0 0.0 2.9358 0.0 0.0 0.0 725.3888735902434 725.3888735902434 20.981362441963327 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]H 2.9358 - 51 1 1.211 25552.4 1.0 10100 5616 15709 HBL1_DMSO_200M_050219_1,15718 HBL1_DMSO_200M_050219_1,15718,LTCIIGKYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15719 76.735 380.0 130140.0 25 0 17324.0 -1 0 72 1117.501131211455 2232.98770948971 2 1117.502978503704 MULTI CID FTMS 0 0 0 15709 256597.09375 1.0 0 0.0 10 3 TQY{M(Oxidation (M))|F}ANQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 13 -1 38.168 0.0 0.0 1.7093 0.0 0.0 601.2595123234977 0.0 601.2595123234977 0.0 25.46452918222325 0.0 0.0 0 0.0 0.0 0.0 0.0 TQY{M(Oxidation (M))|F}ANQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.7093 - 2022 + 1 1.211 40607.2 1.0 10101 5616 15709 HBL1_DMSO_200M_050219_1,15719 HBL1_DMSO_200M_050219_1,15719, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15720 76.739 212.0 363480.0 25 0 48821.0 16245 IVQNGKVI 8 104 435.7738071617562 869.5330613903125 2 435.7740051150322 MULTI CID FTMS 0 0 0 15709 252351.015625 0.3739158488988205 -3 0.2358779907226562 11 Unmodified _IVQNGKVI_ ENSG00000057608|ENST00000380191|GDI2;nc|ENSG00000057608|P50395-2|GDI2 19.438996006549623 0.6237395211498085 3 {[DA]|[EG]}V[RV]VV{I|L} 8 6 + 46.203 0.0 0.0 5.3135 5.3135 80.557 0.0 0.0 0.0 4.559319556497243 16.40978057358332 4.559319556497243 4.559319556497243 0 0.9247425010840048 1.154901959985743 0.0 0.0 {[DA]|[EG]}V[RV]VV{I|L};[VG]E[RV]VV{I|L};[Q{I|L}][W{I|L}]VV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[DA]|[EG]}{I|L}{I|L}V{I|L} 5.3135;4.7891;3.5033;1.4239 -;-;-;- 102 1 1.211 67686.8 1.0 10102 5616 15709 HBL1_DMSO_200M_050219_1,15720 HBL1_DMSO_200M_050219_1,15720,IVQNGKVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15721 76.746 354.0 146900.0 25 0 36354.0 -1 0 39 1006.9381589236204 2011.8617649140408 2 1006.939013659954 MULTI CID FTMS 0 0 0 15709 233685.25 1.0 0 0.0 12 3 T{[QV]|[N{I|L}]|[RA]|[KV]} 3 -1 10.77 0.0 0.0 0.53532 0.0 0.0 1665.6762923572032 0.0 1665.6762923572032 0.0 0.3123468415207497 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 T{[QV]|[N{I|L}]|[RA]|[KV]} 0.53532 - 24 + 1 1.211 46087.9 1.0 10103 5616 15709 HBL1_DMSO_200M_050219_1,15721 HBL1_DMSO_200M_050219_1,15721, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15722 76.752 339.0 109940.0 25 0 4832.4 -1 0 73 805.0296326591022 2412.0670685775062 3 805.3655273318291 MULTI CID FTMS 0 0 0 15709 224466.5625 1.0 0 0.0 13 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{[DA]|[EG]}{I|L}GV 8 -1 41.52 0.0 0.0 1.7214 0.0 0.0 0.0 1622.6633569898688 1622.6633569898688 21.499322410898564 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.2302046884880935 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{[DA]|[EG]}{I|L}GV 1.7214 - 498 1 1.211 34617.3 1.0 10104 5616 15709 HBL1_DMSO_200M_050219_1,15722 HBL1_DMSO_200M_050219_1,15722, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15723 76.758 349.0 54818.0 25 0 4474.1 4847 DFQRTWKEYKV 11 48 750.3865844607353 0 750.3865844607353 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _DFQRTWKEYKV_ ENSG00000091879|ENST00000629816|ANGPT2;nc|ENSG00000091879|O15123-2|ANGPT2;nc|ENSG00000091879|O15123|ANGPT2 0.3506318815782774 0.47618401536486 3 D 1 10 3.0989 0.0 0.0 0.20677 0.0 0.0 1264.658348509558 116.0510500543578 1380.7093985639158 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.20677 + + 2 + 1 1.211 23909.8 1.0 10105 5616 15709 HBL1_DMSO_200M_050219_1,15723 HBL1_DMSO_200M_050219_1,15723,DFQRTWKEYKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15724 76.763 175.0 248670.0 25 0 27417.0 + 24623 MLNDFVPL 8 80 474.7455624564939 0 474.7444335818291 PEAK CID FTMS 0 0 0 15709 172372.421875 1.0 0 0.0 15 Unmodified _MLNDFVPL_ REV__ENSG00000117984|ENST00000236671|CTSD 17.086550045450526 0.4618975036900928 3 S 1 -1 7.2185 0.0 0.0 0.76186 0.0 0.0 729.3491896329112 128.07209192447502 857.4212815573862 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 S 0.76186 - 44 + 1 1.211 36453.8 1.0 10106 5616 15709 HBL1_DMSO_200M_050219_1,15724 HBL1_DMSO_200M_050219_1,15724,MLNDFVPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15725 76.776 731.0 58449.0 25 0 11785.0 -1 0 41 1163.126427477746 3486.357453033438 3 1164.134814441204 MULTI CID FTMS 0 0 0 15709 81498.296875 0.4481581227006284 7 -0.58465576171875 16 3 V 1 -1 6.9897 0.0 0.0 0.20049 0.0 0.0 105.79588184378764 3278.4138887994745 3384.2097706432623 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.20049 - 2 + 1 1.211 43705.7 1.0 10107 5616 15709 HBL1_DMSO_200M_050219_1,15725 HBL1_DMSO_200M_050219_1,15725, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15727 76.78 1.4 28293000.0 25 0 3751400.0 + 18556 DGLRDLPSI 9 63 493.26980998215055 984.5250670311012 2 493.2703430056572 MULTI CID FTMS 0 0 0 15726 37206192.0 0.6594853339627416 1 -0.0386581420898437 1 Unmodified _LAADWLPSL_ nc|ENSG00000134324|Q14693|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1 26.88365393820708 0.1891292719743517 3 [{I|L}P][KC]D{I|L}PS{I|L} 9 4 + 50.396 0.0 0.0 5.1189 5.1189 77.684 0.0 0.0 0.0 5.440680443502757 19.57757090619189 5.440680443502757 3.0102999566398125 0 1.1237125054200234 1.6989700043360187 0.3807196863200844 0.0 [{I|L}P][KC]D{I|L}PS{I|L};[{I|L}P][KC]{I|L}DPS{I|L};[{I|L}P]S[QP]{M(Oxidation (M))|F}PS{I|L};[PS]{I|L}[QP]{M(Oxidation (M))|F}PS{I|L};[{I|L}P][KC]{I|L}S[DP]{I|L};[VG]{[RE]|[WV]}D{I|L}PS{I|L};[KP]{[ES]|[DT]|[{I|L}C]}D{I|L}PS{I|L};[VG]{[RE]|[WV]}{I|L}DPS{I|L};[KP]{[ES]|[DT]|[{I|L}C]}{I|L}DPS{I|L};[VG]{[RE]|[WV]}{I|L}S[DP]{I|L} 5.1189;4.8131;4.6342;4.5662;3.7974;3.0194;2.9605;2.7137;2.6548;1.6979 -;-;-;-;-;-;-;-;-;- 206 1 1.211 35142.0 1.0 10108 5617 15726 HBL1_DMSO_200M_050219_1,15727 HBL1_DMSO_200M_050219_1,15727,LAADWLPSL False False DGLRDLPSI 76.779875 493.270343005657 1108939296.0 15726.0 nc|ENSG00000134324|Q14693|LPIN1;;nc|ENSG00000134324|Q14693-4|LPIN1;;nc|ENSG00000134324|Q14693-5|LPIN1;;nc|ENSG00000134324|Q14693-7|LPIN1;;ENSG00000134324|ENST00000674199|LPIN1;;nc|ENSG00000134324|Q14693-2|LPIN1 2.898823539415995 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15728 76.781 4.7 12097000.0 25 0 2186800.0 + 2560 ASFNDTFVHV 10 76 568.7723329720903 1135.5301130109806 2 568.7726928591728 MULTI CID FTMS 0 0 0 15726 9809817.0 0.3778118623583756 3 -0.2048263549804687 2 Unmodified _ASFNDTFVHV_ ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF 49.93300154707207 0.0805441195901191 3 {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV] 10 0 + 78.76 0.0 0.0 6.9359 6.9359 92.532 0.0 0.0 0.0 59.04992419158454 7.269987279362624 7.269987279362624 13.411964496339294 0 0.3252574989159953 1.5228787452803376 0.7614393726401688 0.4247425010840047 + + {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV];{[SA]|[TG]}{M(Oxidation (M))|F}GGDT{M(Oxidation (M))|F}V[HV];{[ES]|[DT]|[{I|L}C]}[RK]TDN{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDN{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}EKKDN{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TKKDN{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}[RK]TDGG{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDGG{[WT]|[RM]};[WH]VN[MD]V[HV];[WH]NV[MD]V[HV] 6.9359;5.7548;2.6617;2.5517;1.9764;1.8664;1.8508;1.7407;1.352;1.1969 +;-;-;-;-;-;-;-;-;- + 167 + 1 1.211 49505.9 1.0 10109 5617 15726 HBL1_DMSO_200M_050219_1,15728 HBL1_DMSO_200M_050219_1,15728,ASFNDTFVHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15729 76.782 16.0 3953700.0 25 0 463440.0 + 17748 KQADPFASL 9 85 488.7591614411615 975.503769949123 2 488.7591430544853 MULTI CID FTMS 0 0 0 15726 3035122.0 0.4824647026082329 1 -0.0386581420898437 3 Unmodified _KQADPFASL_ ENSG00000148110|ENST00000375344|MFSD14B;nc|ENSG00000148110|Q5SR56-2|MFSD14B 41.95555342248728 0.0647214845423414 3 {[TV]|[{I|L}S]}A[NG]P{M(Oxidation (M))|F}AS{I|L} 10 4 + 75.423 0.0 0.0 7.7317 7.7317 93.825 0.0 0.0 0.0 10.543576623225931 16.53212513775344 10.543576623225931 10.543576623225931 0 1.274227503252014 1.5228787452803376 0.3807196863200844 0.0 {[TV]|[{I|L}S]}A[NG]P{M(Oxidation (M))|F}AS{I|L};{[SA]|[TG]}{I|L}[NG]P{M(Oxidation (M))|F}AS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TP]P{M(Oxidation (M))|F}AS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ADA[KG]AS{I|L};{[TV]|[{I|L}S]}AM{I|L}[NG]AS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AD[KQ]AS{I|L};{NN|[MP]|[D{I|L}]|[EV]}MAA[KG]AS{I|L};{[TV]|[{I|L}S]}A[NG]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DAA[KG]AS{I|L};[TA]V[NG]P{M(Oxidation (M))|F}AS{I|L} 7.7317;6.6509;6.5568;5.9104;5.9084;5.5494;5.3618;5.348;5.2932;5.1924 -;-;-;-;-;-;-;-;-;- 483 1 1.211 56642.5 1.0 10110 5617 15726 HBL1_DMSO_200M_050219_1,15729 HBL1_DMSO_200M_050219_1,15729,KQADPFASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15730 76.783 19.0 2386300.0 25 0 141650.0 + 12760 GVPEWFHGA 9 76 500.2376925666753 998.4608322001508 2 500.2378723025322 MULTI CID FTMS 0 0 0 15726 2953877.0 0.8095951156962061 -2 0.1114654541015625 4 Unmodified _GVPEWFHGA_ ENSG00000196684|ENST00000613986|HSH2D 24.67388899826682 0.2172451872415813 3 [VG]PEW{M(Oxidation (M))|F}HQ 8 2 + 51.508 0.0 0.0 5.1587 5.1587 82.383 0.0 0.0 0.0 30.081013673140617 8.354706403678875 8.354706403678875 6.832457864033202 0 0.2614393726401688 2.0 0.0 0.0 [VG]PEW{M(Oxidation (M))|F}HQ;[VG]P[W{M(Oxidation (M))|F}]EHQ;RPEWE[WP];RPE{[DA]|[EG]}{M(Oxidation (M))|F}HQ;[VG]{[CA]|SS}[HT]{M(Oxidation (M))|F}HQ;R{[CA]|SS}[HT]E[WP] 5.1587;4.4744;3.5593;3.1556;2.831;1.2248 -;-;-;-;-;- 214 + 1 1.211 40365.7 1.0 10111 5617 15726 HBL1_DMSO_200M_050219_1,15730 HBL1_DMSO_200M_050219_1,15730,GVPEWFHGA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15731 76.785 14.0 4599800.0 25 0 334630.0 38342 TQLRTCTTL 9 103 518.7744392634581 1035.5343255937162 2 518.7759887576103 MULTI CID FTMS 0 0 0 15726 2688853.25 0.4318868510341114 1 -0.0386581420898437 5 Unmodified _TQLRTCTTL_ ENSG00000165716|ENST00000371692|DIPK1B;nc|ENSG00000165716|Q5VUD6-2|DIPK1B 14.838274106304384 0.4350285940865338 3 P{I|L}KG{I|L} 5 7 19.385 0.0 0.0 1.872 0.0 0.0 509.1857060642224 0.0 509.1857060642224 0.0 0.8074643676340827 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}KG{I|L} 1.872 - 286 + 1 1.211 55455.1 1.0 10112 5617 15726 HBL1_DMSO_200M_050219_1,15731 HBL1_DMSO_200M_050219_1,15731,TQLRTCTTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15732 76.786 14.0 1293600.0 25 0 111620.0 + 42090 VRDSEMKETL 10 51 604.3050650882861 1206.5955772433722 2 604.3055297732353 MULTI CID FTMS 0 0 0 15726 2595269.25 0.9023059608943966 1 -0.0386581420898437 6 Unmodified _VRDSEMKETL_ REV__ENST00000394662.2_1_1:89889857-89891799:+|nuORF 10.073929032068715 0.6785112666868882 3 T{I|L} 2 -1 17.787 0.0 0.0 1.4741 0.0 0.0 974.4530429189566 0.0 974.4530429189566 0.0 8.834172022634375 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T{I|L} 1.4741 + + 7 + 1 1.211 18098.4 1.0 10113 5617 15726 HBL1_DMSO_200M_050219_1,15732 HBL1_DMSO_200M_050219_1,15732,VRDSEMKETL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15733 76.787 30.0 991700.0 25 0 144840.0 -1 VGGIKPGCFKI 11 58 588.33538923541 1174.65622553762 2 588.3354980349541 MULTI CID FTMS 0 0 0 15726 2060496.875 0.6432607061080826 5 -0.3875961303710937 7 Carbamidomethyl (C) _VGGIKPGC(Carbamidomethyl (C))FKI_ ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY 1.3295316138638542 0.8688751186870782 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.211 30911.4 1.0 10114 5617 15726 HBL1_DMSO_200M_050219_1,15733 HBL1_DMSO_200M_050219_1,15733,VGGIKPGCFKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15734 76.788 23.0 1645300.0 25 0 187990.0 + 21716 LPLSSLTHV 9 65 483.7841440694573 965.5537352057146 2 483.7848998904228 MULTI CID FTMS 0 0 0 15726 1511987.875 0.6608787047285442 -5 0.4791336059570312 8 Unmodified _LPLSSLTHV_ ENSG00000115942|ENST00000234296|ORC2 50.855029805455786 0.0384952370514206 3 {I|L}P{I|L}S{[TV]|[{I|L}S]}THV 9 0 + 72.171 0.0 0.0 7.4746 7.4746 82.37 0.0 0.0 0.0 36.47817481888638 1.3723392645181605 1.3723392645181605 1.3723392645181605 0 0.4247425010840047 2.0 0.8494850021680094 0.0 + + {I|L}P{I|L}S{[TV]|[{I|L}S]}THV;{I|L}P{I|L}S{[TV]|[{I|L}S]}HS{I|L};{I|L}P{I|L}{[WT]|[RM]}THV;{I|L}P{I|L}{[WT]|[RM]}HS{I|L};{I|L}P{I|L}S{[TV]|[{I|L}S]}HTV;{I|L}P{I|L}{[WT]|[RM]}HTV;{I|L}P{I|L}S{[TV]|[{I|L}S]}{I|L}[HS];{I|L}P{I|L}{[WT]|[RM]}{I|L}[HS];[{I|L}P][WE]V[{I|L}P]{I|L} 7.4746;7.3325;7.2978;7.1557;6.9677;6.7909;6.4288;6.252;3.1961 +;-;-;-;-;-;-;-;- + 202 + 1 1.211 34733.0 1.0 10115 5617 15726 HBL1_DMSO_200M_050219_1,15734 HBL1_DMSO_200M_050219_1,15734,LPLSSLTHV True True LPLSSLTHV 76.788125 483.784899890423 129248796.0 15726.0 ENSG00000115942|ENST00000234296|ORC2 7.142000675201416 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15735 76.789 40.0 1373300.0 25 0 176730.0 + 18498 KYPDYEVTW 9 77 600.7823765231306 1199.550200113061 2 600.7825195193291 MULTI CID FTMS 0 0 0 15726 1248870.625 0.5964794395664688 1 -0.0386581420898437 9 Unmodified _KYPDYEVTW_ ENSG00000054148|ENST00000247665|PHPT1 20.41453444215458 0.284085796332423 3 [DP]YEYKVTW 9 4 + 56.08 0.0 0.0 4.6751 4.6751 79.894 0.0 0.0 0.0 4.137342758552691 38.62781577388333 4.137342758552691 6.020599913279625 0 0.9247425010840048 0.0 0.0 0.0 [DP]YEYKVTW;[YE]DPYKVTW;[DP]YEV[YK]TW;[DP]YEVT[YK]W;[DP]YK[YE]VTW;{[WT]|[RM]}{[C(Carbamidomethyl (C))G]|[NC]}YKVTW;[YE]DPV[YK]TW;[YE]DPVT[YK]W;[DP]YEVTW[YK];[YE]V[{M(Oxidation (M))|F}E]KVTW 4.6751;4.1732;3.7607;3.6352;3.5097;3.4671;3.2588;3.1333;2.8834;2.861 -;-;-;-;-;-;-;-;-;- 481 1 1.211 44620.5 1.0 10116 5617 15726 HBL1_DMSO_200M_050219_1,15735 HBL1_DMSO_200M_050219_1,15735,KYPDYEVTW False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15736 76.79 36.0 743400.0 25 0 58464.0 + -1 LMPVPSCVI 9 62 516.2664209966916 1030.5182890601832 2 516.2670165896416 MULTI CID FTMS 0 0 0 15726 1197777.625 0.7942674970226017 1 -0.0386581420898437 10 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))PVPSC(Carbamidomethyl (C))VI_ REV__ENSG00000088930|ENST00000377191|XRN2;REV__nc|ENSG00000088930|Q9H0D6-2|XRN2 9.347437153973935 0.588369872918737 3 T{I|L} 2 -1 13.979 0.0 0.0 1.3565 0.0 0.0 798.3753274896739 0.0 798.3753274896739 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L} 1.3565 - 65 + 1 1.211 27282.5 1.0 10117 5617 15726 HBL1_DMSO_200M_050219_1,15736 HBL1_DMSO_200M_050219_1,15736,LMPVPSCVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15737 76.792 31.0 1681400.0 25 0 219240.0 + 25098 MPYGSLYNV 9 94 522.246698537251 1042.4788441413018 2 522.2474243044853 MULTI CID FTMS 0 0 0 15726 1151164.0 0.4923981624744465 1 -0.0386581420898437 11 Unmodified _MPYGSLYNV_ ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-2|ILK;nc|ENSG00000166333|Q13418-3|ILK 38.15118350030904 0.0856056900103839 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GS{I|L}M 6 4 31.336 0.0 0.0 3.0059 0.0 0.0 0.0 391.1606894177647 391.1606894177647 7.169577525961266 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.274227503252014 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GS{I|L}M 3.0059 - 409 1 1.211 46070.8 1.0 10118 5617 15726 HBL1_DMSO_200M_050219_1,15737 HBL1_DMSO_200M_050219_1,15737,MPYGSLYNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15738 76.793 33.0 1757400.0 25 0 508150.0 24643 MLPSVLKAEA 10 81 529.7991122301067 1057.5836715270134 2 530.2977172732353 MULTI CID FTMS 0 0 0 15726 1077131.25 0.4032269008292191 -5 0.4791336059570312 12 Unmodified _MLPSVLKAEA_ ENST00000450663.1_1_1:173111074-173111284:-|nuORF 14.838274106304384 0.5985701837916485 3 [PG]{M(Oxidation (M))|F}P 4 9 26.823 0.0 0.0 2.5362 0.0 0.0 0.0 656.3646218046102 656.3646218046102 10.422881389671652 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [PG]{M(Oxidation (M))|F}P 2.5362 - 117 1 1.211 54316.6 1.0 10119 5617 15726 HBL1_DMSO_200M_050219_1,15738 HBL1_DMSO_200M_050219_1,15738,MLPSVLKAEA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15739 76.794 53.0 679840.0 25 0 100250.0 + 43697 YAYDGKDYLAL 11 67 646.3138268588649 1290.6131007845297 2 646.3147460818291 MULTI CID FTMS 0 0 0 15726 1046849.5625 0.2111288054654521 5 -0.3875961303710937 13 Unmodified _YAYDGKDYLAL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 24.881564428377168 0.5079759154518888 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]DYAY[{I|L}A] 10 6 + 43.121 0.0 0.0 3.3412 3.3412 77.835 0.0 0.0 0.0 13.283409326844264 21.66772480037345 13.283409326844264 7.7815125038364386 0 0.4247425010840047 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]DYAY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]DAYY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]WYY[{I|L}A];{[YD]|[{M(Oxidation (M))|F}M]}[KQ]{[YD]|[{M(Oxidation (M))|F}M]}Y{I|L}[{I|L}A];{[YD]|[{M(Oxidation (M))|F}M]}[KQ]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}Y[{I|L}A] 3.3412;2.7382;2.4653;0.37924;0.146 -;-;-;-;- 106 1 1.211 34806.6 1.0 10120 5617 15726 HBL1_DMSO_200M_050219_1,15739 HBL1_DMSO_200M_050219_1,15739,YAYDGKDYLAL False True YAYDGKDYLAL 76.794221 646.314746081829 169628088.0 15726.0 nc|ENSG00000204632|P17693-4|HLA-G;;nc|ENSG00000204632|P17693-5|HLA-G;;ENSG00000204632|ENST00000360323|HLA-G 4.82118312517802 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15740 76.795 33.0 491120.0 25 0 53573.0 + 38797 TVEMYLMSL 9 37 543.7642366756554 1085.5139204181107 2 543.7652465701103 MULTI CID FTMS 0 0 0 15726 692660.6875 0.9294831075442596 1 -0.0386581420898437 14 Unmodified _TVEMYLMSL_ REV__ENST00000577066.2_1_17:79006605-79006848:-|nuORF 4.75600775471527 0.7486543447549536 3 {I|L} 1 -1 12.764 0.0 0.0 1.1759 0.0 0.0 954.4187951513125 0.0 954.4187951513125 0.0 -8.20489028679166 -8.20489028679166 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1759 + + 6 + 1 1.211 20382.9 1.0 10121 5617 15726 HBL1_DMSO_200M_050219_1,15740 HBL1_DMSO_200M_050219_1,15740,TVEMYLMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15741 76.797 72.0 1243800.0 25 0 137690.0 + 9148 FFVLVQRQR 9 112 596.8488934234282 1191.6832339136563 2 596.8495361208916 MULTI CID FTMS 0 0 0 15726 670870.0625 0.3923052132169308 1 -0.0386581420898437 15 Unmodified _FFVLVQRQR_ REV__ENSG00000272674|ENST00000609684|PCDHB16 4.75600775471527 0.7486543447549536 3 {I|L} 1 -1 10.379 0.0 0.0 0.87092 0.0 0.0 1060.587833988655 0.0 1060.587833988655 0.0 3.3889035263304024 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.87092 + + 41 + 1 1.211 73074.4 1.0 10122 5617 15726 HBL1_DMSO_200M_050219_1,15741 HBL1_DMSO_200M_050219_1,15741,FFVLVQRQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15742 76.798 46.0 686190.0 25 0 79022.0 + 30912 RITNQVIYL 9 59 560.3294806024868 1118.6444082717735 2 560.3287841677666 MULTI CID FTMS 0 0 0 15726 534421.25 0.6989508796945612 1 -0.0386581420898437 16 Unmodified _RITNQVIYL_ ENSG00000197102|ENST00000360184|DYNC1H1 12.240655878213236 0.5053430591993562 3 {I|L}[HV]QV{I|L}Y{I|L} 8 3 26.214 0.0 0.0 2.3434 0.0 0.0 135.06886489082189 0.0 135.06886489082189 0.0 14.22418399911465 0.0 0.0 0 0.5579021467263782 0.0 0.0 0.0 {I|L}[HV]QV{I|L}Y{I|L} 2.3434 - 38 1 1.211 31928.5 1.0 10123 5617 15726 HBL1_DMSO_200M_050219_1,15742 HBL1_DMSO_200M_050219_1,15742,RITNQVIYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15743 76.807 498.0 312160.0 25 0 11380.0 + 29819 QQLDSKFLEQV 11 176 667.8511758701944 1333.6877988071888 2 667.8512451052666 MULTI CID FTMS 0 0 0 15726 297049.59375 0.342813701689785 -2 0.1114654541015625 17 Unmodified _QQLDSKFLEQV_ ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1 100.7086487251713 0.0002960460221903 3 {NN|[MP]|[D{I|L}]|[EV]}QPT{M(Oxidation (M))|F}Q{I|L}QQ 10 8 58.467 0.0 0.0 4.3839 0.0 0.0 0.0 132.0680475722069 132.0680475722069 9.900380686860352 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.1571406706489746 1.2474250108400469 {NN|[MP]|[D{I|L}]|[EV]}QPT{M(Oxidation (M))|F}Q{I|L}QQ 4.3839 - 24063 1 1.211 117839.0 1.0 10124 5617 15726 HBL1_DMSO_200M_050219_1,15743 HBL1_DMSO_200M_050219_1,15743,QQLDSKFLEQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15744 76.809 59.0 799020.0 25 0 66343.0 40620 VLCYRCLS 8 82 478.7377007766645 955.460848620129 2 478.7372314333916 MULTI CID FTMS 0 0 0 15726 279592.84375 0.566171500718775 1 -0.0386581420898437 18 Unmodified _VLCYRCLS_ ENSG00000155966|ENST00000370460|AFF2;nc|ENSG00000155966|P51816-2|AFF2;nc|ENSG00000155966|P51816-3|AFF2;nc|ENSG00000155966|P51816-5|AFF2;nc|ENSG00000155966|P51816-6|AFF2;nc|ENSG00000155966|P51816-7|AFF2 15.768221252438446 0.6779680726941459 3 [{I|L}V]C 3 5 14.895 0.0 0.0 1.5589 0.0 0.0 0.0 637.278450509054 637.278450509054 -2.730012720637376 0.0 -2.730012720637376 0.0 0 0.0 1.2218487496163564 0.0 0.0 + [{I|L}V]C 1.5589 + + 81 1 1.211 43246.5 1.0 10125 5617 15726 HBL1_DMSO_200M_050219_1,15744 HBL1_DMSO_200M_050219_1,15744,VLCYRCLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15745 76.81 49.0 492970.0 25 0 32466.0 19398 LESIDTEFY 9 60 558.7563390107015 0 558.7557250857353 PEAK CID FTMS 0 0 0 15726 274118.78125 0.8022150306974015 -1 0.0753097534179687 19 Unmodified _LESIDTEFY_ ENSG00000123124|ENST00000517970|WWP1;ENST00000466609.1_1_3:98378565-98379411:+|nuORF;ENST00000518683.5_1_8:87410815-87460532:+|nuORF;nc|ENSG00000123124|Q9H0M0-3|WWP1;nc|ENSG00000123124|Q9H0M0-6|WWP1 3.944395688203298 0.3444685223463734 3 D 1 8 6.9897 0.0 0.0 0.6266 0.0 0.0 558.2348343188738 439.2144869440063 997.4493212628802 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.6266 + + 21 + 1 1.211 23200.4 1.0 10126 5617 15726 HBL1_DMSO_200M_050219_1,15745 HBL1_DMSO_200M_050219_1,15745,LESIDTEFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15746 76.814 229.0 330170.0 25 0 13955.0 + 9052 FELYKRRWWKK 11 133 547.3101802591144 1638.908711377543 3 547.6447631716728 MULTI CID FTMS 0 0 0 15726 257574.5 0.9794692978250068 2 -0.130157470703125 20 Unmodified _FELYKRRWWKK_ REV__ENST00000433473.7_1_1:40558092-40558149:-|nuORF 0.0 0.8751479354844584 3 {I|L}PW 3 -1 40.534 0.0 0.0 2.4732 0.0 0.0 0.0 1239.671164195911 1239.671164195911 18.48258770979733 0.0 0.0 0.0 0 0.2742275032520141 1.3979400086720375 0.0 0.0 {I|L}PW 2.4732 - 873 + 1 1.211 62364.5 1.0 10127 5617 15726 HBL1_DMSO_200M_050219_1,15746 HBL1_DMSO_200M_050219_1,15746,FELYKRRWWKK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15748 76.819 25.0 2306900.0 25 0 306620.0 + 31546 RQLEEEGITFV 11 54 660.8432408738283 1319.6719288144566 2 660.8437377810478 MULTI CID FTMS 0 0 0 15747 2730097.0 0.5205546971051322 2 -0.166168212890625 1 Unmodified _RQLEEEGITFV_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 25.997395711884035 0.4817758527606796 3 EEEG{I|L}T{M(Oxidation (M))|F}V 8 3 66.491 0.0 0.0 5.0384 0.0 0.0 397.2429066388688 0.0 397.2429066388688 0.0 56.88670047696206 0.0 0.0 0 1.0 0.0 0.5 0.0 + EEEG{I|L}T{M(Oxidation (M))|F}V 5.0384 + + 105 1 1.208 49314.9 1.0 10128 5618 15747 HBL1_DMSO_200M_050219_1,15748 HBL1_DMSO_200M_050219_1,15748,RQLEEEGITFV False True RQLEEEGITFV 76.818533 660.843737781048 93012678.0 15747.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 7.522835413614909 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15749 76.82 34.0 436450.0 25 0 47525.0 -1 KKMYVRKY 8 35 566.322423852966 1130.630294772732 2 566.3225585818291 MULTI CID FTMS 0 0 0 15747 1459603.0 0.6293706942003562 -1 0.0386581420898437 2 Oxidation (M) _KKM(Oxidation (M))YVRKY_ ENST00000310421.4_1_8:67545353-67545431:-|nuORF 0.6903765706972694 0.8201419426409876 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.208 20097.4 1.0 10129 5618 15747 HBL1_DMSO_200M_050219_1,15749 HBL1_DMSO_200M_050219_1,15749,KKMYVRKY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15750 76.821 65.0 1595700.0 25 0 406320.0 + 22333 LPSLLEELLS 10 88 557.3215062604374 1112.6284595876748 2 557.3240844607353 MULTI CID FTMS 0 0 0 15747 1105411.5 0.5917219738599072 2 -0.166168212890625 3 Unmodified _LPSLLEELLS_ REV__ENSG00000181652|ENST00000639579|ATG9B;REV__nc|ENSG00000181652|Q674R7-2|ATG9B 20.453626601364224 0.5043500229302764 3 [{I|L}P]TG{I|L}P{I|L} 7 -1 27.444 0.0 0.0 2.4666 0.0 0.0 0.0 418.1789105976936 418.1789105976936 11.360313316889568 0.0 0.0 0.0 0 0.0 0.958607314841775 1.0189301784845295 0.0 [{I|L}P]TG{I|L}P{I|L} 2.4666 - 216 1 1.208 85328.7 1.0 10130 5618 15747 HBL1_DMSO_200M_050219_1,15750 HBL1_DMSO_200M_050219_1,15750,LPSLLEELLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15751 76.822 40.0 1294600.0 25 0 120890.0 + -1 QVQDAVMFV 9 100 526.7592262863544 1051.5038996395087 2 526.7599975466728 MULTI CID FTMS 0 0 0 15747 903790.25 0.5636530010418151 -1 0.0386581420898437 4 Oxidation (M) _QVQDAVM(Oxidation (M))FV_ REV__ENST00000423427.1_2_3:173114403-173322094:+|nuORF 13.50788311687929 0.4710407108020397 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 -1 25.062 0.0 0.0 2.3834 0.0 0.0 0.0 708.2698963038243 708.2698963038243 4.08748409920328 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 2.3834 - 121 1 1.208 48944.7 1.0 10131 5618 15747 HBL1_DMSO_200M_050219_1,15751 HBL1_DMSO_200M_050219_1,15751,QVQDAVMFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15752 76.824 53.0 1316300.0 25 0 83339.0 + 22175 LPPYLPLFL 9 111 536.8241558284378 1071.6337587236756 2 536.8243896365166 MULTI CID FTMS 0 0 0 15747 761702.4375 0.6663483981871655 2 -0.166168212890625 5 Unmodified _LPPYLPLFL_ REV__ENST00000526068.1_1_11:74700005-74701011:+|nuORF;REV__ENST00000532963.1_1_11:74700005-74716467:+|nuORF 20.871210003555333 0.2717241269066626 3 [{I|L}P]KVEQ 6 -1 31.08 0.0 0.0 2.9003 0.0 0.0 0.0 374.2085627610381 374.2085627610381 -1.4557436148340486 0.0 -1.4557436148340486 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 [{I|L}P]KVEQ 2.9003 - 747 1 1.208 61432.9 1.0 10132 5618 15747 HBL1_DMSO_200M_050219_1,15752 HBL1_DMSO_200M_050219_1,15752,LPPYLPLFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15753 76.828 235.0 479810.0 25 0 57263.0 + 12390 GTIGGGIFQA 10 130 460.7453212816936 919.4760896301872 2 460.7456237673759 MULTI CID FTMS 0 0 0 15747 277469.78125 0.1827495181308912 -3 0.1501235961914062 6 Unmodified _GTIGGGIFQA_ ENSG00000134375|ENST00000367287|TIMM17A;ENST00000478378.5_1_1:201924654-201931951:+|nuORF;ENST00000484647.1_1_1:201924654-201926725:+|nuORF 36.12702656103203 0.1984647928738587 3 {M(Oxidation (M))|F}AQ 3 9 24.512 0.0 0.0 2.6659 0.0 0.0 555.3014813311623 0.0 555.3014813311623 0.0 2.9088690346262283 0.0 0.0 0 0.3252574989159953 0.0 0.0 1.0 {M(Oxidation (M))|F}AQ 2.6659 - 688 + 1 1.208 94216.6 1.0 10133 5618 15747 HBL1_DMSO_200M_050219_1,15753 HBL1_DMSO_200M_050219_1,15753,GTIGGGIFQA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15754 76.837 493.0 313950.0 25 0 15584.0 + 7906 ELPSLQNQKN 10 197 585.8110912690179 1169.6076296048357 2 585.8123657107353 MULTI CID FTMS 0 0 0 15747 266871.1875 1.0 0 0.0 7 Unmodified _ELPSLQNQKN_ REV__ENSG00000126778|ENST00000645694|SIX1;REV__ENST00000555955.3_1_14:61113003-61118660:-|nuORF 27.628801355627647 0.3479284626772844 3 {M(Oxidation (M))|F}PY{I|L}[RH]PQ{I|L} 9 -1 + 43.207 0.0 0.0 3.6942 3.6942 74.268 0.0 0.0 0.0 6.905595121919774 9.499200035553445 6.905595121919774 3.516160029892575 0 0.6022338482433752 0.0 0.0 1.024227503252014 {M(Oxidation (M))|F}PY{I|L}[RH]PQ{I|L};{I|L}{I|L}{M(Oxidation (M))|F}Y{I|L}{I|L}YPE;{M(Oxidation (M))|F}PY{I|L}AYRQ{I|L};{M(Oxidation (M))|F}PY{I|L}AYGVQ{I|L};{M(Oxidation (M))|F}PY{I|L}[YQ]VQ{I|L};{M(Oxidation (M))|F}P{I|L}Y[RH]PQ{I|L};{M(Oxidation (M))|F}PY{I|L}{I|L}[YN]Q{I|L};{M(Oxidation (M))|F}PYA{I|L}YRQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[RH]{I|L}YPE;{M(Oxidation (M))|F}PYA{I|L}YGVQ{I|L} 3.6942;3.3935;3.319;3.2799;3.2238;3.0966;3.0492;2.9547;2.9257;2.9156 -;-;-;-;-;-;-;-;-;- 5276 + 1 1.208 119183.5 1.0 10134 5618 15747 HBL1_DMSO_200M_050219_1,15754 HBL1_DMSO_200M_050219_1,15754,ELPSLQNQKN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15755 76.846 509.0 423710.0 25 0 42219.0 17312 KLSQYLIQL 9 245 553.3324813591674 1104.6504097851348 2 553.3326904177666 MULTI CID FTMS 0 0 0 15747 246615.90625 0.4727718427507182 -1 0.0386581420898437 8 Unmodified _KLSQYLIQL_ ENSG00000121879|ENST00000263967|PIK3CA;ENST00000454360.1_1_22:17053938-17054324:+|nuORF 13.042465956692816 0.4836390050082244 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPDQY 7 7 23.948 0.0 0.0 2.1679 0.0 0.0 0.0 226.1915834514036 226.1915834514036 10.081429529156264 0.0 0.0 0.0 0 0.3182503180159344 1.5228787452803376 0.6747425010840047 0.3807196863200844 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPDQY 2.1679 - 1832 1 1.208 163871.5 1.0 10135 5618 15747 HBL1_DMSO_200M_050219_1,15755 HBL1_DMSO_200M_050219_1,15755,KLSQYLIQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15756 76.85 233.0 698370.0 25 0 58088.0 + 2827 AVADHLFKL 9 150 338.5307472798488 1012.5704124397464 3 338.5303832888603 MULTI CID FTMS 0 0 0 15747 249537.0 0.4146946749029657 -2 0.1139678955078125 9 Unmodified _AVADHLFKL_ ENSG00000266967|ENST00000427569|AARSD1;ENST00000416949.5_1_17:41109156-41116489:-|nuORF;ENST00000441280.7_1_17:41108193-41116457:-|nuORF;nc|ENSG00000266967|Q9BTE6-2|AARSD1;nc|ENSG00000266967|Q9BTE6-3|AARSD1 36.12702656103203 0.0967173616627612 3 {[VA]|[{I|L}G]}ADH{I|L}{M(Oxidation (M))|F}K{I|L} 9 0 + 71.561 0.0 0.0 7.0673 7.0673 62.247 0.0 0.0 0.0 27.147642715192504 8.061799739838875 8.061799739838875 0.0 0 0.3494850021680094 2.0 0.4247425010840047 0.2215141619232908 + + {[VA]|[{I|L}G]}ADH{I|L}{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}AD{I|L}H{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}ADH{I|L}{M(Oxidation (M))|F}{I|L}K;{[VA]|[{I|L}G]}AD{I|L}H{M(Oxidation (M))|F}{I|L}K;{[VA]|[{I|L}G]}{I|L}{[DA]|[EG]}H{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}{I|L}{[DA]|[EG]}H{M(Oxidation (M))|F}{I|L}K;[H{I|L}]DA{M(Oxidation (M))|F}K{I|L}G{I|L};[HD]A{I|L}{M(Oxidation (M))|F}K{I|L}G{I|L};{[DA]|[EG]}H{I|L}{M(Oxidation (M))|F}K{I|L}G{I|L};{[VA]|[{I|L}G]}{I|L}{[HG]|PP}V{[CT]|[{M(Oxidation (M))|F}G]}T{I|L} 7.0673;7.0673;6.2711;6.2711;5.8888;5.0926;4.2642;4.2456;3.8161;3.637 +;-;-;-;-;-;-;-;-;- + 730 + 1 1.208 132470.8 1.0 10136 5618 15747 HBL1_DMSO_200M_050219_1,15756 HBL1_DMSO_200M_050219_1,15756,AVADHLFKL True True AVADHLFKL 76.850318 338.53038328886 11388160.0 15747.0 nc|ENSG00000266967|Q9BTE6-2|AARSD1;;nc|ENSG00000266967|Q9BTE6-3|AARSD1;;ENSG00000266967|ENST00000427569|AARSD1;;ENST00000441280.7_1_17:41108193-41116457:-|nuORF;;chr17:42957190-42961192|18|13.94|0.0|20.41|-|0|None,PTGES3L-AARSD1|2;;ENST00000416949.5_1_17:41109156-41116489:-|nuORF 5.675547281901042 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15757 76.863 754.0 524340.0 25 0 52881.0 + 24000 LVVTFCSSD 9 270 324.15669957431527 969.4482693231458 3 324.1566039919853 MULTI CID FTMS 0 0 0 15747 243574.625 1.0 0 0.0 10 Unmodified _LVVTFCSSD_ REV__ENSG00000048707|ENST00000620676|VPS13D;REV__ENST00000460333.5_1_1:12359354-12409038:+|nuORF;REV__ENST00000487188.1_1_1:12371595-12395946:+|nuORF;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D 23.1484247019978 0.2366544122328345 3 {I|L}VE 3 -1 44.693 0.0 0.0 4.6101 0.0 0.0 0.0 625.2312280685113 625.2312280685113 24.709543871828 0.0 0.0 0.0 0 0.0 1.0 0.8494850021680094 0.0 {I|L}VE 4.6101 - 397 + 1 1.208 313765.8 1.0 10137 5618 15747 HBL1_DMSO_200M_050219_1,15757 HBL1_DMSO_200M_050219_1,15757,LVVTFCSSD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15758 76.872 491.0 374190.0 25 0 36072.0 + + -1 IPYQPMPASSPVI 13 146 700.3695056950909 1398.7244584569817 2 700.3677856326103 MULTI CID FTMS 0 0 0 15747 195780.125 1.0 0 0.0 11 2 Carbamidomethyl (C) _NLLLLC(Carbamidomethyl (C))HMLC(Carbamidomethyl (C))L_ ENSG00000169564|ENST00000303577|PCBP1 17.11289562659939 0.6791789249425932 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}ES[C(Carbamidomethyl (C))H]S[DV]{I|L} 12 -1 + 57.489 0.0 0.0 4.1101 4.1101 52.819 0.0 0.0 0.0 2.4598963984729494 13.979400086720377 2.4598963984729494 0.0 0 0.4247425010840047 0.4814860601221125 0.6549471895720985 0.5044321917401079 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}ES[C(Carbamidomethyl (C))H]S[DV]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}ES[C(Carbamidomethyl (C))H]S[{I|L}T]{I|L};[VG]A{I|L}{I|L}ES[C(Carbamidomethyl (C))H]S[{I|L}T]{I|L};{I|L}{I|L}N{I|L}ES[C(Carbamidomethyl (C))H]S[{I|L}T]{I|L};{I|L}{I|L}EQMDPASSPV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}TD[C(Carbamidomethyl (C))H]S[{I|L}T]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}TD[C(Carbamidomethyl (C))H]S[DV]{I|L};[AG]V{I|L}{I|L}ES[C(Carbamidomethyl (C))H]S[{I|L}T]{I|L};{I|L}{I|L}QVES[C(Carbamidomethyl (C))H]S[{I|L}T]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}S[C(Carbamidomethyl (C))H]S[{I|L}T]{I|L} 4.1101;4.1101;3.9342;3.887;3.598;3.5761;3.5761;3.5268;3.5176;3.5151 -;-;-;-;-;-;-;-;-;- 5162 1 1.208 132248.8 1.0 10138 5618 15747 HBL1_DMSO_200M_050219_1,15758 HBL1_DMSO_200M_050219_1,15758,NLLLLCHMLCL False False IPYQPMPASSPVI 76.872052 700.36778563261 2955804.75 15747.0 ENSG00000169564|ENST00000303577|PCBP1 4.836923281351726 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15759 76.881 521.0 111340.0 25 0 4702.4 -1 0 101 881.413061892792 1760.811570852384 2 881.4150268435478 MULTI CID FTMS 0 0 0 15747 182417.5625 0.1125309050424522 6 -0.5010452270507812 12 3 [YQ]{[SA]|[TG]}MAQQNA{M(Oxidation (M))|F} 11 -1 40.27 0.0 0.0 2.287 0.0 0.0 0.0 518.2626195275351 518.2626195275351 21.484583641399016 0.0 0.0 0.0 0 0.0 1.154901959985743 0.3054621874040891 0.9247425010840048 [YQ]{[SA]|[TG]}MAQQNA{M(Oxidation (M))|F} 2.287 - 881 1 1.208 46675.2 1.0 10139 5618 15747 HBL1_DMSO_200M_050219_1,15759 HBL1_DMSO_200M_050219_1,15759, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15760 76.891 528.0 331470.0 25 0 92881.0 20821 LLWRHAIFKL 10 177 648.8976979226226 1295.780842912045 2 649.3986694216728 MULTI CID FTMS 0 0 0 15747 163488.125 0.1902359817496916 -5 0.3498458862304687 13 Unmodified _LLWRHAIFKL_ ENST00000497932.5_1_9:128201168-128209649:-|nuORF 7.289230182591677 0.6929195370588109 3 [TP]G{M(Oxidation (M))|F}EV[VP]{I|L}{I|L}{I|L} 11 10 40.034 0.0 0.0 3.0895 0.0 0.0 0.0 127.06897585368132 127.06897585368132 18.149335940749225 0.0 0.0 0.0 0 0.0 0.7958800173440752 1.281278122288472 0.0 [TP]G{M(Oxidation (M))|F}EV[VP]{I|L}{I|L}{I|L} 3.0895 - 1350 1 1.208 131302.6 1.0 10140 5618 15747 HBL1_DMSO_200M_050219_1,15760 HBL1_DMSO_200M_050219_1,15760,LLWRHAIFKL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15761 76.906 800.0 650510.0 25 0 116570.0 + 12707 GVLSLLIQ 8 260 421.76971602989255 0 421.7698547244072 PEAK CID FTMS 0 0 0 15747 129777.375 1.0 0 0.0 14 Unmodified _GVLSLLIQ_ REV__ENSG00000185942|ENST00000623646|NKAIN3;REV__ENST00000519049.5_1_8:63161632-63877963:+|nuORF;REV__nc|ENSG00000185942|Q8N8D7|NKAIN3 2.577480529830294 0.5910327097116076 3 CHT{M(Oxidation (M))|F}H 5 -1 24.553 0.0 0.0 2.9176 0.0 0.0 70.19047891909868 143.04651819400627 213.23699711310496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 CHT{M(Oxidation (M))|F}H 2.9176 - 597 + 1 1.208 397691.3 0.7900000214576721 10141 5618 15747 HBL1_DMSO_200M_050219_1,15761 HBL1_DMSO_200M_050219_1,15761,GVLSLLIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15763 76.91 6.8 9385400.0 25 0 1470100.0 + 36575 TALLKIEGV 9 71 472.2948718881397 942.5751908430794 2 472.2951232790947 MULTI CID FTMS 0 0 0 15762 9286951.0 0.92705939640099 -1 0.0914993286132812 1 Unmodified _TALLKIEGV_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000329092.12_1_3:197677808-197679492:+|nuORF;ENST00000478069.1_1_4:95290987-95291311:+|nuORF;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 32.78568957990786 0.1150597335874693 3 [TA]{I|L}{I|L}K{[QN]|[E{I|L}]|[KN]}GV 9 0 + 54.644 0.0 0.0 5.7973 5.7973 91.344 0.0 0.0 0.0 17.98840924329106 2.508943624335558 2.508943624335558 54.64387173178174 0 1.2302046884880935 2.0 0.0 0.0 + + [TA]{I|L}{I|L}K{[QN]|[E{I|L}]|[KN]}GV 5.7973 + + 481 + 1 1.208 55843.6 1.0 10142 5619 15762 HBL1_DMSO_200M_050219_1,15763 HBL1_DMSO_200M_050219_1,15763,TALLKIEGV True True TALLKIEGV 76.910037 472.295123279095 272482080.0 15762.0 ENSG00000182899|ENST00000647248|RPL35A;;ENST00000485439.5_1_3:197677808-197681048:+|nuORF;;ENST00000478069.1_1_4:95290987-95291311:+|nuORF;;ENST00000329092.12_1_3:197677808-197679492:+|nuORF 5.083779970804851 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15764 76.912 67.0 1026300.0 25 0 111300.0 + 32653 SDAIPGLKI 9 89 457.2713009316498 912.5280489300995 2 457.2717162966728 MULTI CID FTMS 0 0 0 15762 843672.5625 0.2960295633921944 -3 0.2054672241210937 2 Unmodified _SDAIPGLKI_ ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15 41.8396318013385 0.0653578398400075 3 {[DS]|[MA]|[CV]|TT}A{I|L}PG{I|L}K{I|L} 9 0 + 39.042 0.0 0.0 4.2784 4.2784 77.032 0.0 0.0 0.0 14.604634260465469 5.101402539968497 5.101402539968497 4.436974992327137 0 1.305462187404089 0.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}A{I|L}PG{I|L}K{I|L};{[DS]|[MA]|[CV]|TT}A{I|L}{I|L}[PG]K{I|L} 4.2784;3.7922 +;- + 113 + 1 1.208 57603.8 1.0 10143 5619 15762 HBL1_DMSO_200M_050219_1,15764 HBL1_DMSO_200M_050219_1,15764,SDAIPGLKI True True SDAIPGLKI 76.911637 457.271716296673 72703800.0 15762.0 nc|ENSG00000121749|Q8TC07|TBC1D15;;ENSG00000121749|ENST00000485960|TBC1D15;;nc|ENSG00000121749|Q8TC07-3|TBC1D15 4.878063519795735 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15765 76.913 15.0 2931500.0 25 0 458420.0 + 4073 DAMRLYYV 8 66 515.7543381201868 1029.4941233071736 2 515.7549926638603 MULTI CID FTMS 0 0 0 15762 2280393.75 0.5083469872266435 -3 0.2054672241210937 3 Unmodified _DAMRLYYV_ ENSG00000105258|ENST00000221859|POLR2I;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;ENST00000589591.5_1_19:36604659-36605638:-|nuORF;ENST00000592962.5_1_19:36604659-36605276:-|nuORF 19.361941925380144 0.6248778452073445 3 {[DA]|[EG]}{[WT]|[RM]}{I|L}YYV 8 0 + 50.648 0.0 0.0 4.9197 4.9197 87.811 0.0 0.0 0.0 13.46787486224656 39.05455634180576 13.46787486224656 34.745462655597095 0 0.8252574989159953 1.3010299956639813 0.0 0.0 + + {[DA]|[EG]}{[WT]|[RM]}{I|L}YYV;{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]{[QN]|[E{I|L}]|[KN]}YV 4.9197;1.5447 +;- + 101 1 1.208 38571.0 1.0 10144 5619 15762 HBL1_DMSO_200M_050219_1,15765 HBL1_DMSO_200M_050219_1,15765,DAMRLYYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15766 76.914 18.0 2291400.0 25 0 295450.0 + 16860 KIETALTSL 9 71 488.2897350966558 974.5649172601117 2 488.2899047732353 MULTI CID FTMS 0 0 0 15762 2165419.25 0.4503566955958755 -3 0.2054672241210937 4 Unmodified _KIETALTSL_ ENSG00000171246|ENST00000306773|NPTX1 26.268140514670165 0.1969607489560049 3 [YR]A{I|L}[RP]S{I|L} 8 6 + 32.867 0.0 0.0 3.3725 3.3725 75.113 0.0 0.0 0.0 8.812281309285623 3.2087053676224286 3.2087053676224286 4.771212547196626 0 0.0 0.0 0.8252574989159953 0.0 [YR]A{I|L}[RP]S{I|L};[YR]{I|L}A[RP]S{I|L} 3.3725;2.8829 -;- 233 + 1 1.208 37910.9 1.0 10145 5619 15762 HBL1_DMSO_200M_050219_1,15766 HBL1_DMSO_200M_050219_1,15766,KIETALTSL False True KIETALTSL 76.913995 488.289904773235 77835696.0 15762.0 ENSG00000171246|ENST00000306773|NPTX1 1.2154902170101802 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15767 76.915 42.0 1279200.0 25 0 83614.0 + 34964 SQLEDAIRL 9 94 522.7864290096227 1043.5583050860453 2 522.7861205935478 MULTI CID FTMS 0 0 0 15762 812016.8125 0.2810679678021156 -3 0.2054672241210937 5 Unmodified _SQLEDAIRL_ ENSG00000151746|ENST00000652176|BICD1;ENSG00000185963|ENST00000356884|BICD2;nc|ENSG00000151746|Q96G01-3|BICD1;nc|ENSG00000151746|Q96G01-4|BICD1;nc|ENSG00000185963|Q8TD16|BICD2 18.373094154950223 0.3393451798331396 3 {[QS]|[NT]}{I|L}ED[{I|L}A]R{I|L} 9 0 + 33.07 0.0 0.0 3.169 3.169 76.326 0.0 0.0 0.0 19.575025190615143 1.6039627052916288 1.6039627052916288 6.47817481888638 0 0.9247425010840048 0.0 0.0 0.0 + + {[QS]|[NT]}{I|L}ED[{I|L}A]R{I|L};{[QS]|[NT]}{I|L}E[W{I|L}]R{I|L};{[QS]|[NT]}{I|L}{I|L}HHNPV;{[QS]|[NT]}{I|L}{I|L}HHGGPV;{[QS]|[NT]}{I|L}HH[TP][KP];{[QS]|[NT]}{I|L}{I|L}HHAA[PA];[{I|L}T]NHH[TP][KP];{[QS]|[NT]}{I|L}{I|L}HH[VG][PG] 3.169;2.5482;2.119;1.2366;1.2138;0.44193;0.38798;0.13097 +;-;-;-;-;-;-;- + 203 + 1 1.208 49379.8 1.0 10146 5619 15762 HBL1_DMSO_200M_050219_1,15767 HBL1_DMSO_200M_050219_1,15767,SQLEDAIRL False True SQLEDAIRL 76.915191 522.786120593548 13780167.0 15762.0 nc|ENSG00000151746|Q96G01-4|BICD1;;ENSG00000151746|ENST00000652176|BICD1;;nc|ENSG00000151746|Q96G01-3|BICD1;;nc|ENSG00000185963|Q8TD16|BICD2;;ENSG00000185963|ENST00000356884|BICD2 4.577316602071126 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15768 76.916 36.0 1066200.0 25 0 139630.0 34413 SLVIWGCTL 9 78 496.2658249121724 0 496.2662841677666 PEAK CID FTMS 0 0 0 15762 774092.5625 0.7529659840992649 -1 0.0914993286132812 6 Unmodified _SLVIWGCTL_ ENSG00000168398|ENST00000554311|BDKRB2;nc|ENSG00000168398|P30411-2|BDKRB2 21.74664581756881 0.185237546287679 3 TC{I|L} 3 7 25.445 0.0 0.0 2.5689 0.0 0.0 131.09517413899476 539.2605684869749 670.3557426259697 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 TC{I|L} 2.5689 - 86 + 1 1.208 33974.8 1.0 10147 5619 15762 HBL1_DMSO_200M_050219_1,15768 HBL1_DMSO_200M_050219_1,15768,SLVIWGCTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15769 76.919 100.0 513500.0 25 0 88178.0 + 23019 LSIVSRFLVEF 11 82 655.3822983569952 1308.7500437807903 2 655.3829223513603 MULTI CID FTMS 0 0 0 15762 588382.4375 0.4335686290764561 -6 0.44134521484375 7 Unmodified _LSIVSRFLVEF_ REV__ENSG00000134910|ENST00000392708|STT3A;REV__ENST00000525431.1_1_11:125476222-125478225:+|nuORF;REV__ENST00000531001.1_1_11:125478078-125479612:+|nuORF;REV__ENST00000534472.5_1_11:125465789-125479519:+|nuORF;REV__nc|ENSG00000134910|P46977-2|STT3A 2.498486711656943 0.8633599123570009 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.208 52564.9 1.0 10148 5619 15762 HBL1_DMSO_200M_050219_1,15769 HBL1_DMSO_200M_050219_1,15769,LSIVSRFLVEF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15770 76.92 75.0 566130.0 25 0 52336.0 + 21968 LPPNLYPTV 9 88 507.2871405317021 1012.559728130204 2 507.2873412966728 MULTI CID FTMS 0 0 0 15762 501711.8125 0.3744019164419446 16 -1.0873565673828125 8 Unmodified _LPPNLYPTV_ ENSG00000010017|ENST00000011619|RANBP9;nc|ENSG00000010017|Q96S59-3|RANBP9 34.10243960390752 0.1078313939113124 3 {[VA]|[{I|L}G]}[PG]PY{I|L} 7 6 33.204 0.0 0.0 3.2793 0.0 0.0 0.0 312.1559760983478 312.1559760983478 18.054169578177333 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[VA]|[{I|L}G]}[PG]PY{I|L} 3.2793 - 241 1 1.208 42216.2 1.0 10149 5619 15762 HBL1_DMSO_200M_050219_1,15770 HBL1_DMSO_200M_050219_1,15770,LPPNLYPTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15771 76.924 182.0 584660.0 25 0 60751.0 + 20815 LLWLPVWEH 9 113 398.2204207017784 1191.6394327055352 3 398.2203552126884 MULTI CID FTMS 0 0 0 15762 356128.375 0.3304725132179053 -3 0.2054672241210937 9 Unmodified _LLWLPVWEH_ REV__ENSG00000023909|ENST00000370238|GCLM;REV__nc|ENSG00000023909|P48507-2|GCLM 16.942295170755138 0.3780752226737986 3 {[QN]|[E{I|L}]|[KN]}RPWHE{I|L}{I|L} 9 -1 + 43.466 0.0 0.0 3.6476 3.6476 79.152 0.0 0.0 0.0 5.642492736872597 26.64320017660792 5.642492736872597 8.750612633916994 0 0.1861818737241735 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}RPWHE{I|L}{I|L};[VP][W{I|L}]WHE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}RP{[DA]|[EG]}HE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[VG]PWHE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[VP]GWHE{I|L}{I|L};[RP]{[QN]|[E{I|L}]|[KN]}WHE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}RPW{I|L}{[YC]|[HE]}{I|L};[VP][W{I|L}]W{I|L}{[YC]|[HE]}{I|L};[RP]{[QN]|[E{I|L}]|[KN]}{[DA]|[EG]}HE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[VG]PW{I|L}{[YC]|[HE]}{I|L} 3.6476;2.9132;2.8748;2.8748;2.6222;2.408;2.3935;1.6592;1.6353;1.6208 -;-;-;-;-;-;-;-;-;- 313 1 1.208 88288.0 1.0 10150 5619 15762 HBL1_DMSO_200M_050219_1,15771 HBL1_DMSO_200M_050219_1,15771,LLWLPVWEH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15772 76.927 153.0 599820.0 25 0 35716.0 -1 LISTMEICLN 10 149 597.2985467198754 1192.582540506551 2 597.3001586794853 MULTI CID FTMS 0 0 0 15762 323956.03125 1.0 0 0.0 10 Carbamidomethyl (C) _LISTMEIC(Carbamidomethyl (C))LN_ ENSG00000147231|ENST00000372548|RADX;nc|ENSG00000147231|Q6NSI4-2|RADX;nc|ENSG00000147231|Q6NSI4-3|RADX;nc|ENSG00000147231|Q6NSI4-4|RADX 13.042465956692816 0.6287021003332052 3 HEN 3 -1 26.198 0.0 0.0 2.1967 0.0 0.0 794.4461190915063 0.0 794.4461190915063 0.0 14.777904301057934 0.0 0.0 0 0.0 0.0 0.0 0.0 HEN 2.1967 - 433 1 1.208 73028.1 1.0 10151 5619 15762 HBL1_DMSO_200M_050219_1,15772 HBL1_DMSO_200M_050219_1,15772,LISTMEICLN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15773 76.936 528.0 293340.0 25 0 18675.0 -1 0 144 764.3618345765599 2290.06367432988 3 764.6940795779228 MULTI CID FTMS 0 0 0 15762 246136.140625 1.0 0 0.0 11 3 [MN]PN{I|L}NW{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[YR]QS{I|L}KDD 18 -1 + 95.293 0.0 0.0 4.1611 4.1611 86.36 0.0 0.0 0.0 41.387437564371005 2.5205987591782417 2.5205987591782417 95.29277329116698 0 0.6861818737241735 1.6989700043360187 1.5356668758921828 0.6989700043360187 [MN]PN{I|L}NW{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[YR]QS{I|L}KDD 4.1611 - 4959 + 1 1.208 111841.6 1.0 10152 5619 15762 HBL1_DMSO_200M_050219_1,15773 HBL1_DMSO_200M_050219_1,15773, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15774 76.943 394.0 268560.0 25 0 33987.0 21687 LPLPTRPL 8 111 453.7921119878436 905.5696710424872 2 453.7923156619072 MULTI CID FTMS 0 0 0 15762 212960.265625 0.0033250070700809 51 -3.8939056396484375 12 Unmodified _LPLPTRPL_ chr17:42063058-42098410|20|20.0|0.19|6.75|-|ENST00000436535|ZNF385C,ZNF385C;ENSG00000187595|ENST00000692273|ZNF385C;nc|ENSG00000187595|Q66K41|ZNF385C 28.486842064014134 0.4448922141344407 3 {I|L}PP 3 5 51.312 0.0 0.0 5.6663 0.0 0.0 0.0 595.3586085850586 595.3586085850586 39.09379381312206 0.0 0.0 0.0 0 0.5114393726401688 2.0 0.0 0.0 {I|L}PP 5.6663 - 122 + 1 1.208 86120.5 1.0 10153 5619 15762 HBL1_DMSO_200M_050219_1,15774 HBL1_DMSO_200M_050219_1,15774,LPLPTRPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15775 76.945 77.0 465450.0 25 0 45328.0 + 37459 TLEESEKMI 9 70 540.2682523672291 1078.5219518012582 2 540.7712280154228 MULTI CID FTMS 0 0 0 15762 207002.40625 1.0 0 0.0 13 Unmodified _TLEESEKMI_ REV__ENSG00000163492|ENST00000443758|CCDC141;REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141 8.593279151180031 0.6146971463335029 3 [{I|L}T]H 3 -1 27.447 0.0 0.0 2.5449 0.0 0.0 0.0 724.3082121374488 724.3082121374488 14.973024840566469 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T]H 2.5449 - 44 1 1.208 38034.7 1.0 10154 5619 15762 HBL1_DMSO_200M_050219_1,15775 HBL1_DMSO_200M_050219_1,15775,TLEESEKMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15776 76.959 800.0 123580.0 25 0 13200.0 9620 FLLFVSFLHV 10 133 407.9060300623705 1220.6962607873115 3 407.9067260622978 MULTI CID FTMS 0 0 0 15762 135697.328125 0.6255801089730029 4 -0.3791885375976562 14 Unmodified _FLLFVSFLHV_ ENSG00000157399|ENST00000381134|ARSL 4.3292370932331545 0.7066112369704343 3 {I|L} 1 9 9.6041 0.0 0.0 0.78677 0.0 0.0 1089.6014712138724 0.0 1089.6014712138724 0.0 0.2717883116129638 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.78677 + + 38 + 1 1.208 82078.0 0.75 10155 5619 15762 HBL1_DMSO_200M_050219_1,15776 HBL1_DMSO_200M_050219_1,15776,FLLFVSFLHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15777 76.97 620.0 171730.0 25 0 9949.3 -1 0 122 769.0332372441603 2304.077882332681 3 769.3691894412041 MULTI CID FTMS 0 0 0 15762 116678.0859375 1.0 0 0.0 15 3 [MN]PN{I|L}[HD]Q[W{M(Oxidation (M))|F}]V 11 -1 57.496 0.0 0.0 2.4954 0.0 0.0 0.0 919.4328096979124 919.4328096979124 34.92269641706224 0.0 0.0 0.0 0 0.6694451763165201 1.6989700043360187 0.4247425010840047 0.3807196863200844 [MN]PN{I|L}[HD]Q[W{M(Oxidation (M))|F}]V 2.4954 - 1216 + 1 1.208 83080.6 1.0 10156 5619 15762 HBL1_DMSO_200M_050219_1,15777 HBL1_DMSO_200M_050219_1,15777, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15778 76.98 620.0 69709.0 25 0 1688.2 + -1 WWGMCCCCTCC 11 87 735.7012817263603 0 735.7012817263603 PEAK CID FTMS 0 0 0 -1 0 16 Acetyl (Protein N-term),2 Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))WWGM(Oxidation (M))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CCTCC_ REV__nc|ENSG00000112212|Q5TGU0-2|TSPO2 0.3506318815782774 0.47618401536486 3 V{I|L} 2 -1 7.4743 0.0 0.0 0.50866 0.0 0.0 1014.1521229236206 240.06331812076408 1254.2154410443848 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L} 0.50866 - 77 + 1 1.208 40038.3 1.0 10157 5619 15762 HBL1_DMSO_200M_050219_1,15778 HBL1_DMSO_200M_050219_1,15778,WWGMCCCCTCC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15780 76.985 4.1 13079000.0 25 0 2103800.0 + 23834 LVGLFAIV 8 57 416.2705509744676 830.5265490157352 2 416.2705566287041 MULTI CID FTMS 0 0 0 15779 13053153.0 1.0 0 0.0 1 Unmodified _LVGLFAIV_ REV__ENSG00000164604|ENST00000424100|GPR85 17.086550045450526 0.6584923310065985 3 [{I|L}V]GY 4 -1 33.416 0.0 0.0 4.0235 0.0 0.0 0.0 395.2635539808321 395.2635539808321 17.498774732165998 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}V]GY 4.0235 - 66 1 1.212 47449.3 1.0 10158 5620 15779 HBL1_DMSO_200M_050219_1,15780 HBL1_DMSO_200M_050219_1,15780,LVGLFAIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15781 76.986 4.2 7791100.0 25 0 712790.0 + -1 AYLMKQRV 8 68 512.7859778611456 1023.5574027890912 2 513.2875854372978 MULTI CID FTMS 0 0 0 15779 10170463.0 0.849252729196155 1 -0.101531982421875 2 Oxidation (M) _AYLM(Oxidation (M))KQRV_ REV__ENSG00000151239|ENST00000395510|TWF1;REV__nc|ENSG00000151239|Q12792-3|TWF1 6.354104778181461 0.7857632046190106 3 V 1 -1 13.495 0.0 0.0 1.3184 0.0 0.0 906.478177180496 0.0 906.478177180496 0.0 3.037275116073344 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3184 + + 37 + 1 1.212 34096.4 1.0 10159 5620 15779 HBL1_DMSO_200M_050219_1,15781 HBL1_DMSO_200M_050219_1,15781,AYLMKQRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15782 76.987 12.0 9223700.0 25 0 766960.0 + 2373 AQLYENRL 8 126 503.7702303152252 1005.5259076972504 2 503.7704345583916 MULTI CID FTMS 0 0 0 15779 4378392.5 1.0 0 0.0 3 Unmodified _AQLYENRL_ REV__ENSG00000013561|ENST00000394520|RNF14;REV__nc|ENSG00000013561|Q9UBS8-2|RNF14 28.486842064014134 0.4448922141344407 3 [QA]{I|L} 3 -1 28.958 0.0 0.0 2.8798 0.0 0.0 0.0 690.3230628088315 690.3230628088315 8.60383862589011 0.0 0.0 0.0 0 0.805462187404089 0.9208187539523752 0.0 0.4247425010840047 [QA]{I|L} 2.8798 + + 635 1 1.212 85199.1 1.0 10160 5620 15779 HBL1_DMSO_200M_050219_1,15782 HBL1_DMSO_200M_050219_1,15782,AQLYENRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15783 76.988 15.0 3483800.0 25 0 845240.0 + 32245 RWPDYVREL 9 55 617.3225132351072 1232.6304735370145 2 617.3226806521416 MULTI CID FTMS 0 0 0 15779 2846281.25 0.5414358673997458 4 -0.3348770141601562 4 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 32.037481411007896 0.1235546156350648 3 {I|L}{M(Oxidation (M))|F}RVY[DP]W 8 8 55.923 0.0 0.0 4.5369 0.0 0.0 0.0 153.07833276920158 153.07833276920158 50.438134727926 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.805462187404089 {I|L}{M(Oxidation (M))|F}RVY[DP]W 4.5369 - 79 + 1 1.212 44648.8 1.0 10161 5620 15779 HBL1_DMSO_200M_050219_1,15783 HBL1_DMSO_200M_050219_1,15783,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15784 76.989 22.0 2570000.0 25 0 239610.0 27712 PLLGVCKSI 9 73 465.2765336199419 928.538514306684 2 465.2765380740166 MULTI CID FTMS 0 0 0 15779 2268977.25 0.9977496540106784 1 -0.101531982421875 5 Unmodified _PLLGVCKSI_ ENSG00000141376|ENST00000407086|BCAS3;ENST00000589916.5_1_17:58756818-58885438:+|nuORF;nc|ENSG00000141376|Q9H6U6-3|BCAS3;nc|ENSG00000141376|Q9H6U6-7|BCAS3;nc|ENSG00000141376|Q9H6U6-8|BCAS3;nc|ENSG00000141376|Q9H6U6|BCAS3 23.1484247019978 0.2366544122328345 3 S[HV][{I|L}P]S{I|L} 7 6 25.902 0.0 0.0 2.7896 0.0 0.0 177.09860197276686 0.0 177.09860197276686 0.0 15.444860297860428 0.0 0.0 0 0.4247425010840047 0.0 0.566901560044258 0.0 S[HV][{I|L}P]S{I|L} 2.7896 - 136 + 1 1.212 51957.3 1.0 10162 5620 15779 HBL1_DMSO_200M_050219_1,15784 HBL1_DMSO_200M_050219_1,15784,PLLGVCKSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15785 76.991 37.0 2209900.0 25 0 238570.0 + 32255 RWPDYVREL 9 79 411.88404851646834 1232.630316149605 3 411.8839904665947 MULTI CID FTMS 0 0 0 15779 1480563.625 0.5562537441256324 4 -0.3348770141601562 6 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 49.55428908609986 0.0413471690215031 3 [WR]PDY 5 4 44.819 0.0 0.0 3.6361 0.0 0.0 0.0 512.2826608692261 512.2826608692261 22.63530736855822 0.0 0.0 0.0 0 1.3182503180159344 1.6989700043360187 0.3807196863200844 0.5866968715561641 + [WR]PDY 3.6361 + + 99 1 1.212 67307.4 1.0 10163 5620 15779 HBL1_DMSO_200M_050219_1,15785 HBL1_DMSO_200M_050219_1,15785,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15786 76.992 37.0 1290600.0 25 0 250840.0 + 12193 GQRLRWLRH 9 62 611.3559007792654 1220.6972486253308 2 611.3561889529228 MULTI CID FTMS 0 0 0 15779 1368073.375 0.3580297473264686 4 -0.3348770141601562 7 Unmodified _GQRLRWLRH_ REV__ENST00000587173.5_1_17:41170727-41174193:-|nuORF 1.844237919475145 0.850302753031785 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.212 41180.1 1.0 10164 5620 15779 HBL1_DMSO_200M_050219_1,15786 HBL1_DMSO_200M_050219_1,15786,GQRLRWLRH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15787 76.993 40.0 693170.0 25 0 67886.0 + 24625 MLNLWVFKI 9 56 582.3351836576426 1162.655814382085 2 582.3354369997978 MULTI CID FTMS 0 0 0 15779 1367842.375 0.6000176450958203 -5 0.3162918090820312 8 Unmodified _MLNLWVFKI_ REV__ENST00000548086.1_12:52168118-52180332:+|nuORF 2.059750862983233 0.8427793054688888 3 {I|L} 1 -1 3.9794 0.0 0.0 0.34227 0.0 0.0 483.28967776274754 563.2709444635374 1046.560622226285 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.34227 + + 4 + 1 1.212 28049.3 1.0 10165 5620 15779 HBL1_DMSO_200M_050219_1,15787 HBL1_DMSO_200M_050219_1,15787,MLNLWVFKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15788 76.994 32.0 1622100.0 25 0 233660.0 + + 23162 RLLEATSYL 9 76 533.2987637996065 1064.582974666013 2 533.3006469607353 MULTI CID FTMS 0 0 0 15779 1185378.125 0.4310503919898202 4 -0.3348770141601562 9 Unmodified _LSQLKNSYL_ ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A 30.63653989081413 0.1413794767160703 3 ATSY{I|L} 5 -1 49.993 0.0 0.0 4.696 0.0 0.0 511.31199843574376 0.0 511.31199843574376 0.0 35.16736697407653 0.0 0.0 0 0.8807196863200843 0.0 0.9247425010840048 0.0 ATSY{I|L} 4.696 - 108 1 1.212 49398.5 1.0 10166 5620 15779 HBL1_DMSO_200M_050219_1,15788 HBL1_DMSO_200M_050219_1,15788,LSQLKNSYL False False RLLEATSYL 76.994134 533.300646960735 14741084.0 15779.0 ENSG00000004487|ENST00000400181|KDM1A;;nc|ENSG00000004487|O60341|KDM1A 5.148693879445394 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15789 76.995 31.0 1405900.0 25 0 76941.0 + -1 PLMLLQVPM 9 88 537.290713953186 1072.566874973172 2 537.2899658083916 MULTI CID FTMS 0 0 0 15779 787238.5625 0.4183365109789688 -5 0.3162918090820312 10 2 Oxidation (M) _PLM(Oxidation (M))LLQVPM(Oxidation (M))_ REV__ENST00000344692.7_1_8:144356972-144357419:+|nuORF 19.438996006549623 0.310492472477042 3 QQAKKP[NP]Y 9 -1 + 27.469 0.0 0.0 2.5611 2.5611 68.772 0.0 0.0 0.0 1.6325789885748063 1.6325789885748063 1.6325789885748063 1.6325789885748063 0 0.8807196863200843 0.0 0.0 1.0 QQAKKP[NP]Y;[{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TW[PS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}P]{I|L}TW[{I|L}A];[{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}W[PS];[{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}T{[DA]|[EG]}[PS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QT]KKA[HT];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}P]T{I|L}W[PS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}P]{I|L}T{[DA]|[EG]}[{I|L}A];[{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}{[DA]|[EG]}[{I|L}A];[HT][PG]PKKA[HT] 2.5611;2.4089;2.022;1.8024;1.5503;1.4416;1.4155;1.1634;0.94384;0.77021 -;-;-;-;-;-;-;-;-;- 129 + 1 1.212 41456.1 1.0 10167 5620 15779 HBL1_DMSO_200M_050219_1,15789 HBL1_DMSO_200M_050219_1,15789,PLMLLQVPM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15790 76.998 147.0 631720.0 25 0 60521.0 + 39485 VARPKPPCLIS 11 106 590.8482621041803 1179.6819712751603 2 590.8492309451103 MULTI CID FTMS 0 0 0 15779 512040.4375 0.314326822821149 -3 0.2048263549804687 11 Unmodified _VARPKPPCLIS_ REV__ENSG00000180902|ENST00000321264|D2HGDH;REV__ENST00000436747.5_1_2:242681986-242688401:+|nuORF;REV__nc|ENSG00000180902|Q8N465-2|D2HGDH;REV__nc|ENSG00000180902|Q8N465-3|D2HGDH 2.9952420565917617 0.861016188266951 3 E{M(Oxidation (M))|F}Y 3 -1 11.682 0.0 0.0 0.9903 0.0 0.0 218.2508462680653 519.2478349528699 737.4986812209352 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{M(Oxidation (M))|F}Y 0.9903 - 47 + 1 1.212 73435.8 1.0 10168 5620 15779 HBL1_DMSO_200M_050219_1,15790 HBL1_DMSO_200M_050219_1,15790,VARPKPPCLIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15791 77.0 103.0 791370.0 25 0 100050.0 + 9615 FLLEKGYEV 9 107 549.2969689145009 1096.5793848958017 2 549.2982055544853 MULTI CID FTMS 0 0 0 15779 330967.71875 0.5852066524682746 -2 0.166168212890625 12 Unmodified _FLLEKGYEV_ ENSG00000112699|ENST00000380815|GMDS;nc|ENSG00000112699|O60547-2|GMDS 43.85829265575387 0.0542763391141878 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GYV{M(Oxidation (M))|F}{I|L}{I|L}E 9 8 + 57.202 0.0 0.0 5.2164 5.2164 76.57 0.0 0.0 0.0 2.059319556497244 2.678560271916126 2.059319556497244 2.059319556497244 0 0.8494850021680094 0.0 1.4005149978319906 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GYV{M(Oxidation (M))|F}{I|L}{I|L}E;[KA]DYV{M(Oxidation (M))|F}{I|L}{I|L}E;{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}VKECV;{[QN]|[E{I|L}]|[KN]}K[HS]E{I|L}{I|L}E;[YG]EKV{M(Oxidation (M))|F}{I|L}{I|L}E;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[HS]E{I|L}{I|L}E;{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}VK[DC]{I|L};{M(Oxidation (M))|F}{I|L}{I|L}E[HS][VG]PV;[{I|L}T][VG][HS]E{I|L}{I|L}E;{[QN]|[E{I|L}]|[KN]}KGY[{M(Oxidation (M))|F}V]{I|L}E 5.2164;5.0286;4.9721;4.8993;4.8371;4.7929;4.1218;4.0718;4.0251;3.9742 -;-;-;-;-;-;-;-;-;- 1357 1 1.212 67486.9 1.0 10169 5620 15779 HBL1_DMSO_200M_050219_1,15791 HBL1_DMSO_200M_050219_1,15791,FLLEKGYEV True True FLLEKGYEV 77.00047 549.298205554485 5642902.0 15779.0 ENSG00000112699|ENST00000380815|GMDS;;nc|ENSG00000112699|O60547-2|GMDS 4.9543265501658125 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15792 77.009 465.0 1098200.0 25 0 104470.0 24109 LYKLTAHKHK 10 198 619.8693062180286 1237.724059502857 2 619.8694946169853 MULTI CID FTMS 0 0 0 15779 272303.71875 0.1002486924222153 4 -0.3348770141601562 13 Unmodified _LYKLTAHKHK_ ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM 10.073929032068715 0.6785112666868882 3 [Y{I|L}]KPVDA{I|L} 8 7 30.512 0.0 0.0 2.4652 0.0 0.0 0.0 335.2142077785008 335.2142077785008 14.992822134202012 0.0 0.0 0.0 0 1.242992819099939 1.2218487496163564 0.0 0.0 [Y{I|L}]KPVDA{I|L} 2.4652 - 470 1 1.212 371392.7 1.0 10170 5620 15779 HBL1_DMSO_200M_050219_1,15792 HBL1_DMSO_200M_050219_1,15792,LYKLTAHKHK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15793 77.013 228.0 1190200.0 25 0 101620.0 42445 VTFSREVIVV 10 164 574.8354535289292 1147.6563541246585 2 574.8350707888603 MULTI CID FTMS 0 0 0 15779 277057.1875 0.381279513604276 2 -0.182769775390625 14 Unmodified _VTFSREVIVV_ ENSG00000237651|ENST00000432605|C2orf74 15.847184025352805 0.5816416552707754 3 V 1 9 12.764 0.0 0.0 1.1122 0.0 0.0 1030.5768538578598 0.0 1030.5768538578598 0.0 3.729832835061213 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1122 + + 360 + 1 1.212 202171.6 1.0 10171 5620 15779 HBL1_DMSO_200M_050219_1,15793 HBL1_DMSO_200M_050219_1,15793,VTFSREVIVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15794 77.023 582.0 482450.0 25 0 26991.0 + 31112 RLLPPGAVVAV 11 238 546.3501745056776 1090.6857960781551 2 546.3500854372978 MULTI CID FTMS 0 0 0 15779 187490.09375 0.1322495191814697 23 -1.7123870849609375 15 Unmodified _RLLPPGAVVAV_ ENSG00000142544|ENST00000421832|CTU1 32.78568957990786 0.3235288296534633 3 AVVAV 5 6 39.079 0.0 0.0 3.583 0.0 0.0 633.3968189204288 0.0 633.3968189204288 0.0 10.051054076549526 0.0 0.0 0 0.7396518287104438 0.0 0.0 0.0 + AVVAV 3.583 + + 2713 1 1.212 219336.8 1.0 10172 5620 15779 HBL1_DMSO_200M_050219_1,15794 HBL1_DMSO_200M_050219_1,15794,RLLPPGAVVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15795 77.037 800.0 284240.0 25 0 22107.0 + 12408 GTIKKFLSL 9 238 336.21505394531823 1005.6233324361548 3 336.2146484255791 MULTI CID FTMS 0 0 0 15779 132893.15625 1.0 0 0.0 16 Unmodified _GTIKKFLSL_ ENSG00000180628|ENST00000336126|PCGF5 13.90604991867851 0.4602628045680013 3 {I|L}S 2 7 15.573 0.0 0.0 1.5486 0.0 0.0 289.1636899574423 513.3181856744749 802.4818756319171 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 + {I|L}S 1.5486 + + 110 + 1 1.212 178307.9 0.7900000214576721 10173 5620 15779 HBL1_DMSO_200M_050219_1,15795 HBL1_DMSO_200M_050219_1,15795,GTIKKFLSL False True GTIKKFLSL 77.037059 336.214648425579 1157947.125 15779.0 ENSG00000180628|ENST00000336126|PCGF5 1.2779650886853535 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15796 77.047 544.0 153590.0 25 0 6592.9 34779 SQDFLREYVLF 11 145 708.8639705033731 1415.7133880735462 2 708.3836547732353 MULTI CID FTMS 0 0 0 -1 0 17 Unmodified _SQDFLREYVLF_ ENSG00000152104|ENST00000366956|PTPN14 15.248480904072842 0.7179608125786238 3 {[QS]|[NT]}{M(Oxidation (M))|F}D{I|L} 5 7 31.767 0.0 0.0 2.2439 0.0 0.0 0.0 822.4180749234087 822.4180749234087 8.83545563467452 0.0 0.0 0.0 0 0.0 0.744727494896694 0.9258337024346172 0.6989700043360187 {[QS]|[NT]}{M(Oxidation (M))|F}D{I|L} 2.2439 - 661 1 1.212 62101.0 1.0 10174 5620 15779 HBL1_DMSO_200M_050219_1,15796 HBL1_DMSO_200M_050219_1,15796,SQDFLREYVLF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15797 77.06 800.0 273460.0 25 0 20479.0 + -1 DAYVLRMRRR 10 203 451.250238625652 1350.728886477156 3 451.5842468142509 MULTI CID FTMS 0 0 0 15779 123886.96875 1.0 0 0.0 18 Oxidation (M) _DAYVLRM(Oxidation (M))RRR_ REV__ENSG00000162390|ENST00000343744|ACOT11;REV__ENST00000498228.1_1_1:55014277-55063089:+|nuORF;REV__nc|ENSG00000162390|Q8WXI4|ACOT11 10.315234532428624 0.6744623947628824 3 {[DA]|[EG]}YV{I|L}R 6 -1 21.207 0.0 0.0 1.5701 0.0 0.0 0.0 630.3355823108222 630.3355823108222 3.1439395722196224 0.0 0.0 0.0 0 0.5 1.154901959985743 0.0 0.0 {[DA]|[EG]}YV{I|L}R 1.5701 + + 1140 1 1.212 171737.8 0.8899999856948853 10175 5620 15779 HBL1_DMSO_200M_050219_1,15797 HBL1_DMSO_200M_050219_1,15797,DAYVLRMRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15798 77.068 336.0 250660.0 25 0 16329.0 + 39411 VALDRVFHV 9 125 352.5381557944639 1054.5926379835917 3 352.5380432009697 MULTI CID FTMS 0 0 0 15779 105073.1640625 0.6402665557897969 -1 0.0746688842773437 19 Unmodified _VALDRVFHV_ ENSG00000087077|ENST00000200457|TRIP6;ENST00000476870.5_1_7:100468185-100470922:+|nuORF 26.020703789607367 0.2001090068861241 3 VA{I|L}D 4 5 45.271 0.0 0.0 4.2927 0.0 0.0 0.0 653.3542520813518 653.3542520813518 33.05228025768591 0.0 0.0 0.0 0 0.4749073637206092 1.6989700043360187 0.0 0.0 + VA{I|L}D 4.2927 + + 84 + 1 1.212 80959.0 1.0 10176 5620 15779 HBL1_DMSO_200M_050219_1,15798 HBL1_DMSO_200M_050219_1,15798,VALDRVFHV False True VALDRVFHV 77.06799 352.53804320097 1677995.875 15779.0 ENST00000476870.5_1_7:100468185-100470922:+|nuORF;;ENSG00000087077|ENST00000200457|TRIP6 1.8229207396507263 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15799 77.082 800.0 225230.0 25 0 13697.0 + 16958 KIPEDILKEV 10 216 395.2360448243234 1182.6863050731704 3 395.2358276247978 MULTI CID FTMS 0 0 0 15779 99871.6640625 1.0 0 0.0 20 Unmodified _KIPEDILKEV_ ENSG00000104331|ENST00000262644|BPNT2 16.274544907608252 0.5744709547479872 3 R{I|L}KEV 5 6 20.077 0.0 0.0 1.6976 0.0 0.0 539.2959374968017 0.0 539.2959374968017 0.0 5.02941345293436 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 R{I|L}KEV 1.6976 - 329 + 1 1.212 143633.7 0.7599999904632568 10177 5620 15779 HBL1_DMSO_200M_050219_1,15799 HBL1_DMSO_200M_050219_1,15799,KIPEDILKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15801 77.086 4.6 13551000.0 25 0 1775100.0 18557 LAADWLPSL 9 79 493.26980998215055 984.5250670311012 2 493.2700683474541 MULTI CID FTMS 0 0 0 15800 5118862.0 0.0907325967564535 5 -0.3205642700195312 1 Unmodified _LAADWLPSL_ ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1 20.453626601364224 0.2830276176381075 3 [{I|L}P][KC]D{I|L}PS{I|L} 9 4 + 50.192 0.0 0.0 5.0981 5.0981 81.281 0.0 0.0 0.0 18.76287494579976 16.278871405390667 16.278871405390667 6.020599913279625 0 0.8831596456423735 2.0 0.4247425010840047 0.0 [{I|L}P][KC]D{I|L}PS{I|L};[{I|L}P][KC]{I|L}DPS{I|L};[{I|L}P][KC]{I|L}S[DP]{I|L};[KP]{[ES]|[DT]|[{I|L}C]}D{I|L}PS{I|L};[{I|L}P][KC]{I|L}S{I|L}[DP];[KP]{[ES]|[DT]|[{I|L}C]}{I|L}DPS{I|L};[KP]{[ES]|[DT]|[{I|L}C]}{I|L}S[DP]{I|L};[KP]{[ES]|[DT]|[{I|L}C]}{I|L}S{I|L}[DP];{[ET]|[MV]}{I|L}S[KG][HT]{I|L} 5.0981;4.4866;3.6141;3.1923;2.9793;2.5808;1.7084;1.0735;0.18865 -;-;-;-;-;-;-;-;- 144 1 1.212 53477.3 1.0 10178 5621 15800 HBL1_DMSO_200M_050219_1,15801 HBL1_DMSO_200M_050219_1,15801,LAADWLPSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15802 77.087 42.0 1429000.0 25 0 240480.0 + 2561 ASFNDTFVHV 10 88 568.7723329720903 1135.5301130109806 2 568.7725097537041 MULTI CID FTMS 0 0 0 15800 1191942.875 0.045906071176307 7 -0.4506912231445312 2 Unmodified _ASFNDTFVHV_ ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF 41.8396318013385 0.1381409678234242 3 {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV] 10 0 + 73.505 0.0 0.0 6.4732 6.4732 91.111 0.0 0.0 0.0 39.7843794508065 7.269987279362624 7.269987279362624 13.4119644963393 0 0.3054621874040891 1.3979400086720375 0.3807196863200844 0.4247425010840047 + + {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV];{[SA]|[TG]}{M(Oxidation (M))|F}GGDT{M(Oxidation (M))|F}V[HV];{[SA]|[TG]}{M(Oxidation (M))|F}N[HV][{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]};{[ES]|[DT]|[{I|L}C]}[RK]TDN{[WT]|[RM]};{[SA]|[TG]}{[ES]|[DT]|[{I|L}C]}[WR]N{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDN{[WT]|[RM]};{[WT]|[RM]}S[WR]N{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}AS[WR]N{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}[RK]TDGG{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDGG{[WT]|[RM]} 6.4732;5.2921;2.6167;2.3961;2.2925;2.2164;1.6459;1.6008;1.5852;1.4055 +;-;-;-;-;-;-;-;-;- + 274 + 1 1.212 50715.7 1.0 10179 5621 15800 HBL1_DMSO_200M_050219_1,15802 HBL1_DMSO_200M_050219_1,15802,ASFNDTFVHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15803 77.089 3.4 14050000.0 25 0 1571500.0 15523 IPVLANFIV 9 75 493.30750595992856 984.6004589866571 2 493.3076660037041 MULTI CID FTMS 0 0 0 15800 5948553.0 0.4048899874324247 5 -0.3205642700195312 3 Unmodified _IPVLANFIV_ ENSG00000146085|ENST00000274813|MMUT 16.942295170755138 0.3780752226737986 3 {I|L}P 2 7 43.711 0.0 0.0 4.4395 0.0 0.0 0.0 771.4424532525999 771.4424532525999 17.05591267411002 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.4395 + + 114 + 1 1.212 42648.7 1.0 10180 5621 15800 HBL1_DMSO_200M_050219_1,15803 HBL1_DMSO_200M_050219_1,15803,IPVLANFIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15804 77.09 16.0 3906800.0 25 0 824980.0 + 16011 ITELQKNGR 9 75 529.7991122301067 1057.5836715270134 2 529.7996703982353 MULTI CID FTMS 0 0 0 15800 2884056.0 0.6508400220477931 -1 0.101531982421875 4 Unmodified _ITELQKNGR_ ENST00000441868.2_1_6:135219409-135219799:+|nuORF 39.957323273325 0.0756908302845263 3 [{I|L}T]MR 4 6 44.274 0.0 0.0 4.1864 0.0 0.0 0.0 553.2857760065061 553.2857760065061 24.888969058565525 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.805462187404089 [{I|L}T]MR 4.1864 - 377 + 1 1.212 51380.8 1.0 10181 5621 15800 HBL1_DMSO_200M_050219_1,15804 HBL1_DMSO_200M_050219_1,15804,ITELQKNGR True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15805 77.091 27.0 2444500.0 25 0 231070.0 + 21717 LPLSSLTHV 9 71 483.7841440694573 965.5537352057146 2 483.7850219607353 MULTI CID FTMS 0 0 0 15800 1719044.75 0.7513817316494049 -1 0.101531982421875 5 Unmodified _LPLSSLTHV_ ENSG00000115942|ENST00000234296|ORC2 50.855029805455786 0.0384952370514206 3 {I|L}P{I|L}S{[TV]|[{I|L}S]}HS{I|L} 9 3 + 79.069 0.0 0.0 8.189 8.189 90.398 0.0 0.0 0.0 36.47817481888637 7.327344480616915 7.327344480616915 6.355129762210922 0 0.8494850021680094 2.0 1.3441876774005248 0.0 {I|L}P{I|L}S{[TV]|[{I|L}S]}HS{I|L};{I|L}P{I|L}{[WT]|[RM]}HS{I|L};{I|L}P{I|L}S{[TV]|[{I|L}S]}THV;{I|L}P{I|L}S[HV]TS{I|L};{I|L}P{I|L}S{[TV]|[{I|L}S]}HTV;{I|L}P{I|L}{[WT]|[RM]}THV;{I|L}P{I|L}{[WT]|[RM]}HTV;{I|L}P{I|L}S[HV]TTV;[{I|L}P][WE]{I|L}PV{I|L};[{I|L}P][WE]V[{I|L}P]{I|L} 8.189;7.5308;7.4301;7.3831;7.3773;6.7719;6.7191;6.5714;5.2679;3.7672 -;-;+;-;-;-;-;-;-;- + 156 + 1 1.212 53942.3 1.0 10182 5621 15800 HBL1_DMSO_200M_050219_1,15805 HBL1_DMSO_200M_050219_1,15805,LPLSSLTHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15806 77.092 31.0 2185700.0 25 0 217850.0 + 12761 GVPEWFHGA 9 77 500.2376925666753 998.4608322001508 2 500.2380859255791 MULTI CID FTMS 0 0 0 15800 1579915.0 0.4330212352156747 2 -0.2029876708984375 6 Unmodified _GVPEWFHGA_ ENSG00000196684|ENST00000613986|HSH2D 40.44857923139169 0.0729940656229577 3 [VG]PW{M(Oxidation (M))|F}EHQ 8 4 + 66.19 0.0 0.0 6.6292 6.6292 78.348 0.0 0.0 0.0 30.91251590079672 5.774509799928715 5.774509799928715 0.4524904595219681 0 0.3252574989159953 2.0 0.3252574989159953 0.0 [VG]PW{M(Oxidation (M))|F}EHQ;RPEG{M(Oxidation (M))|F}EHQ;[VG]PEW{M(Oxidation (M))|F}HQ;[VG]PWE{M(Oxidation (M))|F}HQ;RPEGE{M(Oxidation (M))|F}HQ;[VG]{[CA]|SS}HT{M(Oxidation (M))|F}HQ 6.6292;6.5839;6.4075;6.0262;5.9809;4.5965 -;-;-;-;-;- 306 + 1 1.212 57443.4 1.0 10183 5621 15800 HBL1_DMSO_200M_050219_1,15806 HBL1_DMSO_200M_050219_1,15806,GVPEWFHGA True True GVPEWFHGA 77.092142 500.238085925579 114574344.0 15800.0 ENSG00000196684|ENST00000613986|HSH2D 7.790565649668376 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15807 77.094 81.0 867970.0 25 0 45712.0 + + 37164 QPYMPTVSATI 11 118 604.3483545669761 1206.6821562007522 2 604.3481933474541 MULTI CID FTMS 0 0 0 15800 799813.9375 0.1970161460268671 9 -0.5087814331054688 7 Unmodified _TIASFFRPRL_ ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENST00000551805.1_1_12:57908749-57909143:+|nuORF;ENSG00000166986|ENST00000262027|MARS1 10.073929032068715 0.6785112666868882 3 [{I|L}T]AS[HT]{[MG]|[TS]}SAT 11 -1 36.675 0.0 0.0 3.0393 0.0 0.0 0.0 146.15381082405216 146.15381082405216 23.486998292505533 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8494850021680094 0.0 [{I|L}T]AS[HT]{[MG]|[TS]}SAT 3.0393 - 1198 1 1.212 55635.7 1.0 10184 5621 15800 HBL1_DMSO_200M_050219_1,15807 HBL1_DMSO_200M_050219_1,15807,TIASFFRPRL False False QPYMPTVSATI 77.093981 604.348193347454 29920978.0 15800.0 ENST00000537638.6_1_12:57905855-57911076:+|nuORF;;ENST00000551805.1_1_12:57908749-57909143:+|nuORF;;ENSG00000166986|ENST00000262027|MARS1 7.0248955090840655 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15808 77.096 119.0 751520.0 25 0 112730.0 + -1 VLCRLVCLSI 10 105 588.33538923541 1174.65622553762 2 588.3356201052666 MULTI CID FTMS 0 0 0 15800 733300.3125 0.2289269556926785 9 -0.5087814331054688 8 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))RLVCLSI_ REV__ENST00000447069.5_3_2:201677557-201677948:+|nuORF 7.289230182591677 0.6929195370588109 3 {I|L} 1 -1 9.6041 0.0 0.0 0.81761 0.0 0.0 1043.561634328439 0.0 1043.561634328439 0.0 0.2717883116129638 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.81761 + + 46 + 1 1.212 68760.1 1.0 10185 5621 15800 HBL1_DMSO_200M_050219_1,15808 HBL1_DMSO_200M_050219_1,15808,VLCRLVCLSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15809 77.099 115.0 1183600.0 25 0 94293.0 + 32057 RVLEKPESLLL 11 129 432.9338057776429 1295.7795879331288 3 432.9343444705009 MULTI CID FTMS 0 0 0 15800 536401.6875 0.4511619180671423 -2 0.1762008666992187 9 Unmodified _RVLEKPESLLL_ ENSG00000137221|ENST00000372449|TJAP1;ENST00000454762.1_1_6:43472456-43473590:+|nuORF;nc|ENSG00000137221|Q5JTD0-2|TJAP1;nc|ENSG00000137221|Q5JTD0-4|TJAP1 22.48609341952514 0.5642223135719058 3 [EP]S{I|L}K[R{I|L}]D{I|L}{I|L}{I|L} 11 7 + 46.212 0.0 0.0 3.5663 3.5663 78.47 0.0 0.0 0.0 7.988630810804075 14.19016691817962 7.988630810804075 7.988630810804075 0 0.2742275032520141 1.2218487496163564 1.5044321917401078 0.0 [EP]S{I|L}K[R{I|L}]D{I|L}{I|L}{I|L};[RV]{I|L}EKPES{I|L}{I|L}{I|L};{I|L}{I|L}[RD]KPES{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[TP]VKPES{I|L}{I|L}{I|L};{I|L}{I|L}[DG]VKPES{I|L}{I|L}{I|L};[RV]{I|L}EKPTD{I|L}{I|L}{I|L};[TP]D{I|L}K[R{I|L}]D{I|L}{I|L}{I|L};[RV]{I|L}EK{I|L}S[EP]{I|L}{I|L};{I|L}{I|L}[RD]KPTD{I|L}{I|L}{I|L};[RV]{I|L}EKPE{I|L}S{I|L}{I|L} 3.5663;2.9498;2.8039;2.5816;2.5105;2.4852;2.3911;2.3897;2.3393;2.2569 -;+;-;-;-;-;-;-;-;- + 1307 1 1.212 120101.1 1.0 10186 5621 15800 HBL1_DMSO_200M_050219_1,15809 HBL1_DMSO_200M_050219_1,15809,RVLEKPESLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15810 77.102 149.0 880350.0 25 0 173680.0 + 12410 GTINNLIHV 9 146 490.7805389466103 979.5465249600206 2 490.7804748415947 MULTI CID FTMS 0 0 0 15800 542322.5 0.5402298857730901 -1 0.101531982421875 10 Unmodified _GTINNLIHV_ ENSG00000131791|ENST00000254101|PRKAB2;nc|ENSG00000131791|O43741-2|PRKAB2 44.40701690623563 0.0526327925666318 3 {[SA]|[TG]}{I|L}NN{I|L}{I|L}HV 9 0 + 61.85 0.0 0.0 6.3142 6.3142 81.044 0.0 0.0 0.0 19.990823894397565 2.710667722865381 2.710667722865381 2.710667722865381 0 0.3807196863200844 1.5228787452803376 0.0 0.7742275032520141 + + {[SA]|[TG]}{I|L}NN{I|L}{I|L}HV;{[SA]|[TG]}{I|L}NN{I|L}{I|L}VH;{[SA]|[TG]}{I|L}N{I|L}N{I|L}HV;{[SA]|[TG]}{I|L}N{I|L}N{I|L}VH;{[SA]|[TG]}{I|L}GGN{I|L}{I|L}HV;{[SA]|[TG]}{I|L}GGN{I|L}{I|L}VH;{[SA]|[TG]}{I|L}NN{I|L}[HV]{I|L};{[SA]|[TG]}{I|L}NGG{I|L}{I|L}HV;{[SA]|[TG]}{I|L}GG{I|L}N{I|L}HV;{[SA]|[TG]}{I|L}NGG{I|L}{I|L}VH 6.3142;6.0374;5.6995;5.4228;5.3741;5.0974;5.0452;5.0173;4.7595;4.7406 +;-;-;-;-;-;-;-;-;- + 1969 + 1 1.212 105068.6 1.0 10187 5621 15800 HBL1_DMSO_200M_050219_1,15810 HBL1_DMSO_200M_050219_1,15810,GTINNLIHV True True GTINNLIHV 77.10184 490.780474841595 6833535.0 15800.0 nc|ENSG00000131791|O43741-2|PRKAB2;;ENSG00000131791|ENST00000254101|PRKAB2 6.432502587636312 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15811 77.104 79.0 1074000.0 25 0 111530.0 + 45714 YYFDRDDVAL 10 101 638.7959865395435 1275.577420145887 2 638.7962524294853 MULTI CID FTMS 0 0 0 15800 439020.96875 0.4946418704062172 -2 0.1762008666992187 11 Unmodified _YYFDRDDVAL_ ENSG00000167996|ENST00000273550|FTH1;ENST00000533138.1_1_11:61732822-61734897:-|nuORF;ENST00000534719.1_1_11:61732389-61734897:-|nuORF 37.07464296494664 0.1884581770199685 3 VYYA{I|L} 5 7 44.196 0.0 0.0 3.4648 0.0 0.0 648.2520129337222 0.0 648.2520129337222 0.0 -4.463950151760656 -4.463950151760656 0.0 0 0.9247425010840048 0.0 0.0 0.0 VYYA{I|L} 3.4648 - 100 1 1.212 68639.1 1.0 10188 5621 15800 HBL1_DMSO_200M_050219_1,15811 HBL1_DMSO_200M_050219_1,15811,YYFDRDDVAL False True YYFDRDDVAL 77.103667 638.796252429485 21792952.5 15800.0 ENST00000534719.1_1_11:61732389-61734897:-|nuORF;;ENSG00000167996|ENST00000273550|FTH1;;ENST00000533138.1_1_11:61732822-61734897:-|nuORF 7.411162853240967 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15812 77.11 379.0 506570.0 25 0 21040.0 + 29820 QQLDSKFLEQV 11 178 667.8511758701944 1333.6877988071888 2 667.8507568240166 MULTI CID FTMS 0 0 0 15800 389859.84375 0.449922501118178 2 -0.2029876708984375 12 Unmodified _QQLDSKFLEQV_ ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1 100.7086487251713 0.0002960460221903 3 [AG]VPT{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}QQ{[QV]|[N{I|L}]|[RA]|[KV]} 12 8 + 50.564 0.0 0.0 3.7913 3.7913 77.17 0.0 0.0 0.0 5.475769966111656 8.570124457603555 5.475769966111656 5.888271188750359 0 0.0 1.6989700043360187 1.700061205686631 0.4247425010840047 [AG]VPT{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}QQ{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}[YN]{I|L}E{I|L}QQ{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VPT{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}KSD{I|L}QQ{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}EPT{M(Oxidation (M))|F}Q{I|L}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[AG]{I|L}[Y{I|L}]SD{I|L}QQ{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VPT{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}Q[AG]{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VPT{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[AG]Q{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}E[KS]{M(Oxidation (M))|F}{I|L}QQ{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}EPT{I|L}{M(Oxidation (M))|F}QE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.7913;3.3498;3.3207;3.3104;3.124;3.1138;3.1091;3.1091;3.0583;2.9887 -;-;-;-;-;-;-;-;-;- 26928 1 1.212 141573.8 1.0 10189 5621 15800 HBL1_DMSO_200M_050219_1,15812 HBL1_DMSO_200M_050219_1,15812,QQLDSKFLEQV True True QQLDSKFLEQV 77.110482 667.850756824017 15560933.0 15800.0 nc|ENSG00000115415|P42224-2|STAT1;;ENSG00000115415|ENST00000361099|STAT1 3.891255974769592 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15813 77.113 106.0 797600.0 25 0 106100.0 -1 0 101 675.3719249350147 674.3646484684147 1 675.3711425662041 MULTI CID FTMS 0 0 0 15800 410233.71875 1.0 0 0.0 13 3 {[CP]|[EA]}{I|L}{I|L}MV 6 -1 + 57.713 0.0 0.0 8.5582 8.5582 94.829 0.0 0.0 0.0 23.798793729568857 34.539106406846045 23.798793729568857 9.75772496747986 0 0.6747425010840047 0.7958800173440752 0.9361818737241736 0.0 {[CP]|[EA]}{I|L}{I|L}MV;{[CP]|[EA]}{I|L}M{I|L}V;{[CP]|[EA]}M{I|L}{I|L}V;{I|L}{I|L}AEMV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QN]|[E{I|L}]|[KN]}AV;{[TV]|[{I|L}S]}{I|L}T{[QN]|[E{I|L}]|[KN]};{I|L}{I|L}[DC]{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[DP]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EPV 8.5582;7.1112;4.6278;4.1843;3.6916;2.7229;2.2765;1.8862;1.5588;1.4216 -;-;-;-;-;-;-;-;-;- 268 1 1.212 69549.2 1.0 10190 5621 15800 HBL1_DMSO_200M_050219_1,15813 HBL1_DMSO_200M_050219_1,15813, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15814 77.12 415.0 923650.0 25 0 59240.0 + + 39640 NQYRLIVNV 9 258 559.3191911814267 1116.6238294296534 2 559.8202392458916 MULTI CID FTMS 0 0 0 15800 357649.6875 0.3542370124021443 -4 0.3063583374023437 14 Unmodified _VDVMNVIVTK_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 15.248480904072842 0.5916873121453583 3 DV{I|L}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}VNV 9 -1 53.717 0.0 0.0 4.8106 0.0 0.0 115.08895804102094 0.0 115.08895804102094 0.0 35.81805874535934 0.0 0.0 0 0.0 0.0 0.3494850021680094 2.33889035263304 DV{I|L}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}VNV 4.8106 - 12275 + 1 1.212 285820.5 1.0 10191 5621 15800 HBL1_DMSO_200M_050219_1,15814 HBL1_DMSO_200M_050219_1,15814,VDVMNVIVTK False False NQYRLIVNV 77.120163 559.820239245892 9568501.0 15800.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 5.7839938799540205 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15815 77.127 391.0 508290.0 25 0 35530.0 -1 0 147 644.6571323982859 1930.9495677950567 3 644.9916259646416 MULTI CID FTMS 0 0 0 15800 361741.75 0.4825946775963902 -4 0.3063583374023437 15 3 {[DA]|[EG]}VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[WY]RTT{I|L} 13 -1 58.468 0.0 0.0 3.0279 0.0 0.0 0.0 300.1236697785304 300.1236697785304 32.819301118137254 0.0 0.0 0.0 0 1.0 1.6989700043360187 1.1549471895720984 0.0 {[DA]|[EG]}VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[WY]RTT{I|L} 3.0279 - 482 1 1.212 151083.0 1.0 10192 5621 15800 HBL1_DMSO_200M_050219_1,15815 HBL1_DMSO_200M_050219_1,15815, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15816 77.136 526.0 428200.0 25 0 72920.0 + 4984 DGRVLVVI 8 171 435.7738071617562 869.5330613903125 2 435.7739745974541 MULTI CID FTMS 0 0 0 15800 331208.9375 0.4907619282667149 2 -0.2029876708984375 16 Unmodified _DGRVLVVI_ ENSG00000111371|ENST00000398637|SLC38A1 36.12702656103203 0.299085846329477 3 {[DA]|[EG]}V[RV]VV{I|L} 8 3 + 41.463 0.0 0.0 4.7684 4.7684 74.133 0.0 0.0 0.0 0.5332825651495625 15.877044449490905 0.5332825651495625 1.549250328207961 0 0.9247425010840048 0.958607314841775 0.3054621874040891 0.2742275032520141 {[DA]|[EG]}V[RV]VV{I|L};[Q{I|L}]W{I|L}VV{I|L};[KQ][NG]{I|L}VV{I|L} 4.7684;4.5903;4.3533 -;-;- 170 1 1.212 178371.5 1.0 10193 5621 15800 HBL1_DMSO_200M_050219_1,15816 HBL1_DMSO_200M_050219_1,15816,DGRVLVVI False True DGRVLVVI 77.136423 435.773974597454 5959370.5 15800.0 ENSG00000111371|ENST00000398637|SLC38A1 2.472866137822469 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15817 77.144 408.0 447820.0 25 0 47368.0 + 31547 RQLEEEGITFV 11 155 660.8432408738283 1319.6719288144566 2 660.8431884646416 MULTI CID FTMS 0 0 0 15800 315931.1875 0.0602394213887372 5 -0.3205642700195312 17 Unmodified _RQLEEEGITFV_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 57.10758569107544 0.0808838796364293 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EEEG{I|L}T{M(Oxidation (M))|F}V 11 0 + 86.384 0.0 0.0 6.5459 6.5459 85.182 0.0 0.0 0.0 3.4768294003359586 71.04742758861818 3.4768294003359586 4.964264099150483 0 1.2614393726401687 0.0 1.3829131673969606 0.0 + + {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EEEG{I|L}T{M(Oxidation (M))|F}V;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}EEEG{I|L}T{M(Oxidation (M))|F}V;[{I|L}A]{[NV]|[RG]}EEEG{I|L}T{M(Oxidation (M))|F}V;[{I|L}T]G{[ES]|[DT]|[{I|L}C]}[PA]EG{I|L}T{M(Oxidation (M))|F}V;[{I|L}T]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[PA]EG{I|L}T{M(Oxidation (M))|F}V;[{I|L}T]AAM[PA]EG{I|L}T{M(Oxidation (M))|F}V;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}EEW{I|L}T{M(Oxidation (M))|F}V;[{I|L}A]{[NV]|[RG]}EEW{I|L}T{M(Oxidation (M))|F}V;[{I|L}T]G{[ES]|[DT]|[{I|L}C]}[PA]W{I|L}T{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[PG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EG{I|L}T{M(Oxidation (M))|F}V 6.5459;6.1697;6.1133;5.9959;5.9121;5.7311;5.6687;5.6123;5.4926;4.9366 +;-;-;-;-;-;-;-;-;- + 1956 1 1.212 135048.9 1.0 10194 5621 15800 HBL1_DMSO_200M_050219_1,15817 HBL1_DMSO_200M_050219_1,15817,RQLEEEGITFV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15818 77.148 236.0 627570.0 25 0 97699.0 + 16205 IVISKLTQI 9 152 507.8320386199183 1013.6495243066366 2 507.8324767947197 MULTI CID FTMS 0 0 0 15800 307823.34375 0.5705287729244576 -1 0.101531982421875 18 Unmodified _IVISKLTQI_ ENSG00000113141|ENST00000417647|IK 53.832793166522166 0.0319663582346103 3 {I|L}V{I|L}S[K{I|L}]TQ{I|L} 9 0 + 71.849 0.0 0.0 7.0881 7.0881 89.977 0.0 0.0 0.0 20.62912832325497 8.974767936499155 8.974767936499155 8.974767936499155 0 0.6549471895720985 2.0 1.110924374808178 0.5138793319624578 + + {I|L}V{I|L}S[K{I|L}]TQ{I|L};{I|L}V{I|L}S[K{I|L}]DKV;{I|L}V{I|L}S[K{I|L}]AAS{I|L};{I|L}V{I|L}S[K{I|L}]TAG{I|L};{I|L}V{I|L}S[K{I|L}]AATV;{I|L}V{I|L}S[K{I|L}]TAAV;{I|L}V{I|L}S[K{I|L}][VG]SV 7.0881;6.2027;6.0027;5.9872;5.7057;5.6902;5.2603 +;-;-;-;-;-;- + 2027 + 1 1.212 120330.2 1.0 10195 5621 15800 HBL1_DMSO_200M_050219_1,15818 HBL1_DMSO_200M_050219_1,15818,IVISKLTQI True True IVISKLTQI 77.148146 507.83247679472 6953013.5 15800.0 ENSG00000113141|ENST00000417647|IK 2.269194563229879 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15819 77.158 466.0 501230.0 25 0 34336.0 -1 IYPEAVTMF 9 225 543.7642366756554 1085.5139204181107 2 543.7628051638603 MULTI CID FTMS 0 0 0 15800 280083.21875 0.3758443711802955 5 -0.3205642700195312 19 Oxidation (M) _IYPEAVTM(Oxidation (M))F_ ENSG00000112640|ENST00000485511|PPP2R5D;ENST00000467447.1_1_6:42974755-42975804:+|nuORF;nc|ENSG00000112640|Q14738-2|PPP2R5D;nc|ENSG00000112640|Q14738-3|PPP2R5D 24.67388899826682 0.2172451872415813 3 [EP]AVKT{I|L}Q 8 -1 30.153 0.0 0.0 2.7778 0.0 0.0 0.0 215.9937142126201 215.9937142126201 -1.4230276142303993 0.0 -1.4230276142303993 0.0 0 0.2887254899964357 0.744727494896694 0.0 0.0 [EP]AVKT{I|L}Q 2.7778 - 3775 1 1.212 176996.4 1.0 10196 5621 15800 HBL1_DMSO_200M_050219_1,15819 HBL1_DMSO_200M_050219_1,15819,IYPEAVTMF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15820 77.163 304.0 447790.0 25 0 45000.0 -1 ISMFLFLPL 9 145 366.2099155382401 1095.6079172149205 3 366.2094604372978 MULTI CID FTMS 0 0 0 15800 225970.640625 0.955984178204219 2 -0.2029876708984375 20 Oxidation (M) _ISM(Oxidation (M))FLFLPL_ ENST00000589797.5_1_17:40732375-40732486:-|nuORF 10.799506525563784 0.5443532743200366 3 {I|L}PND{M(Oxidation (M))|F}K{I|L}H{I|L} 9 -1 + 45.074 0.0 0.0 4.1141 4.1141 72.72 0.0 0.0 0.0 22.32844133917819 1.870866433571443 1.870866433571443 1.870866433571443 0 0.5114393726401688 0.585026652029182 0.0 0.0 {I|L}PND{M(Oxidation (M))|F}K{I|L}H{I|L};{I|L}PND{M(Oxidation (M))|F}K{I|L}{I|L}H;{I|L}PGGD{M(Oxidation (M))|F}K{I|L}H{I|L};{I|L}PGGD{M(Oxidation (M))|F}K{I|L}{I|L}H;{I|L}PND{M(Oxidation (M))|F}[H{I|L}]K{I|L};{I|L}PGGD{M(Oxidation (M))|F}[H{I|L}]K{I|L};{I|L}YY{M(Oxidation (M))|F}K{I|L}H{I|L};{I|L}YY{M(Oxidation (M))|F}K{I|L}{I|L}H;{I|L}YY{M(Oxidation (M))|F}[H{I|L}]K{I|L} 4.1141;3.9433;3.2736;3.1029;2.9104;2.07;1.9137;1.7429;0.71 -;-;-;-;-;-;-;-;- 250 + 1 1.212 119800.5 1.0 10197 5621 15800 HBL1_DMSO_200M_050219_1,15820 HBL1_DMSO_200M_050219_1,15820,ISMFLFLPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15822 77.167 35.0 2912600.0 25 0 423700.0 + 7824 ELKIKESRE 9 96 566.322423852966 1130.630294772732 2 566.3220092654228 MULTI CID FTMS 0 0 0 15821 1660517.25 0.716003525865709 3 -0.1817626953125 1 Unmodified _ELKIKESRE_ REV__ENSG00000154767|ENST00000285021|XPC;REV__ENST00000455144.6_1_3:14206267-14209863:-|nuORF;REV__nc|ENSG00000154767|Q01831-2|XPC 6.2057823575117 0.6980434486082533 3 {I|L} 1 -1 10.278 0.0 0.0 0.90901 0.0 0.0 999.5352305410898 0.0 999.5352305410898 0.0 9.308486509168592 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.90901 + + 18 + 1 1.218 82915.5 1.0 10198 5622 15821 HBL1_DMSO_200M_050219_1,15822 HBL1_DMSO_200M_050219_1,15822,ELKIKESRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15823 77.169 56.0 1744700.0 25 0 226120.0 + + 32539 GTIGGGIFQA 10 114 460.7453212816936 919.4760896301872 2 460.7456237673759 MULTI CID FTMS 0 0 0 15821 1356794.875 0.8936238335276836 1 -0.1217498779296875 2 Unmodified _SANAVLFQA_ ENSG00000134375|ENST00000367287|TIMM17A;ENST00000478378.5_1_1:201924654-201931951:+|nuORF;ENST00000484647.1_1_1:201924654-201926725:+|nuORF 32.30548876998284 0.1201446275138228 3 [AG]{M(Oxidation (M))|F}K[RP][MN] 8 -1 + 18.872 0.0 0.0 2.0524 2.0524 67.34 0.0 0.0 0.0 0.3715731879875683 0.8118013356267753 0.3715731879875683 1.0526595187979382 0 0.0 1.5228787452803376 0.0 0.2302046884880938 [AG]{M(Oxidation (M))|F}K[RP][MN];[AG]{M(Oxidation (M))|F}R[KP][MN];[AG]{M(Oxidation (M))|F}RQ[WR];[AG]K[RP]{M(Oxidation (M))|F}[MN];[AG]K{I|L}{[WT]|[RM]}[MN];[AG]K{M(Oxidation (M))|F}[RP][MN];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K[RP][MN];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R[KP][MN];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RQ[WR];[AG]{M(Oxidation (M))|F}R[AG][WR] 2.0524;1.9379;1.8651;1.4747;1.4613;1.3976;1.2979;1.1834;1.1204;0.85036 -;-;-;-;-;-;-;-;-;- 527 1 1.218 79024.5 1.0 10199 5622 15821 HBL1_DMSO_200M_050219_1,15823 HBL1_DMSO_200M_050219_1,15823,SANAVLFQA False False GTIGGGIFQA 77.168881 460.745623767376 15945138.0 15821.0 ENSG00000134375|ENST00000367287|TIMM17A;;ENST00000478378.5_1_1:201924654-201931951:+|nuORF;;ENST00000484647.1_1_1:201924654-201926725:+|nuORF 5.025413513183594 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15824 77.171 105.0 772810.0 25 0 63132.0 + 20286 LLDVNRDLLLL 11 81 648.8976979226226 1295.780842912045 2 648.8983642458916 MULTI CID FTMS 0 0 0 15821 750374.6875 0.5815811534687992 -1 0.08123779296875 3 Unmodified _LLDVNRDLLLL_ REV__ENSG00000139719|ENST00000267199|VPS33A;REV__ENST00000542790.1_1_12:122734385-122735751:-|nuORF;REV__ENST00000544349.5_1_12:122734385-122734640:-|nuORF 32.61649475675321 0.3263573656665891 3 [EP]S{I|L}K{I|L}RD{I|L}{I|L}{I|L} 11 -1 + 82.684 0.0 0.0 6.381 6.381 84.162 0.0 0.0 0.0 17.95880017344075 15.070623213458036 15.070623213458036 4.648167490521175 0 0.7134679910804405 1.2218487496163564 1.8441876774005248 0.0 [EP]S{I|L}K{I|L}RD{I|L}{I|L}{I|L};[EP]S{I|L}{I|L}KRD{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[EP]K{I|L}RD{I|L}{I|L}{I|L};[RV]{I|L}EK[EP]S{I|L}{I|L}{I|L};[RV]{I|L}EK{I|L}S[EP]{I|L}{I|L};[TP]D{I|L}K{I|L}RD{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[TP]VG{I|L}RD{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[EP]{I|L}KRD{I|L}{I|L}{I|L};{I|L}{I|L}[RD]K[EP]S{I|L}{I|L}{I|L};[RV]{I|L}EK[TP]D{I|L}{I|L}{I|L} 6.381;6.0223;4.9951;4.9879;4.8958;4.8376;4.771;4.6364;4.6128;4.5232 -;-;-;-;-;-;-;-;-;- 1416 1 1.218 65349.8 1.0 10200 5622 15821 HBL1_DMSO_200M_050219_1,15824 HBL1_DMSO_200M_050219_1,15824,LLDVNRDLLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15825 77.173 82.0 1192700.0 25 0 118050.0 + -1 QVQDAVMFV 9 134 526.7592262863544 1051.5038996395087 2 526.7592651247978 MULTI CID FTMS 0 0 0 15821 549941.4375 0.3429735402037417 3 -0.1817626953125 4 Oxidation (M) _QVQDAVM(Oxidation (M))FV_ REV__ENST00000423427.1_2_3:173114403-173322094:+|nuORF 13.50788311687929 0.4710407108020397 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C(Carbamidomethyl (C)) 4 -1 26.911 0.0 0.0 2.5593 0.0 0.0 0.0 548.2372424952306 548.2372424952306 5.57651258738964 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C(Carbamidomethyl (C)) 2.5593 - 550 1 1.218 83306.9 1.0 10201 5622 15821 HBL1_DMSO_200M_050219_1,15825 HBL1_DMSO_200M_050219_1,15825,QVQDAVMFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15826 77.175 79.0 2007900.0 25 0 1079900.0 -1 SKSMRGVV 8 111 440.2413441046072 0 440.2412902712822 PEAK CID FTMS 0 0 0 15821 578984.375 0.3934734148951885 -3 0.2574386596679687 5 Oxidation (M) _SKSM(Oxidation (M))RGVV_ ENST00000223324.2_1_7:42971853-42971943:+|nuORF 5.230669730166228 0.5807325378471833 3 V 1 -1 4.6041 0.0 0.0 0.5241 0.0 0.0 153.09933209877312 623.2785552517213 776.3778873504943 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.5241 + + 11 + 1 1.218 125175.0 1.0 10202 5622 15821 HBL1_DMSO_200M_050219_1,15826 HBL1_DMSO_200M_050219_1,15826,SKSMRGVV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15827 77.177 125.0 918930.0 25 0 82238.0 + 902 AEYIAQVKGI 10 122 546.3088276121259 1090.6031022910518 2 546.3088867068291 MULTI CID FTMS 0 0 0 15821 527981.875 0.2248898459813722 -3 0.2574386596679687 6 Unmodified _AEYIAQVKGI_ ENSG00000203705|ENST00000366974|TATDN3;nc|ENSG00000203705|Q17R31-2|TATDN3;nc|ENSG00000203705|Q17R31-3|TATDN3;nc|ENSG00000203705|Q17R31-4|TATDN3 52.268347100219714 0.0668375294751462 3 {[CP]|[EA]}Y{I|L}VV{[RE]|[WV]}{I|L} 9 4 + 46.832 0.0 0.0 4.2941 4.2941 76.636 0.0 0.0 0.0 6.637342758552691 4.097008428675117 4.097008428675117 4.097008428675117 0 1.1989700043360187 0.0 0.0 0.25 {[CP]|[EA]}Y{I|L}VV{[RE]|[WV]}{I|L};{[CP]|[EA]}Y{I|L}VV[W{I|L}]V;{[CP]|[EA]}Y{I|L}V[RD]{I|L}{I|L};{[CP]|[EA]}Y{I|L}{I|L}QE{I|L}{I|L};{[CP]|[EA]}Y{I|L}V{I|L}[RD]{I|L};{[CP]|[EA]}Y{I|L}V{I|L}{[RE]|[WV]}V;{[CP]|[EA]}Y{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}CVV{[RE]|[WV]}{I|L};{[CP]|[EA]}Y{I|L}{I|L}V[RD]{I|L};{[CP]|[EA]}Y{I|L}{I|L}V{[RE]|[WV]}V 4.2941;3.9184;3.8111;3.5407;3.424;3.2775;3.0963;3.0801;2.9865;2.84 -;-;-;-;-;-;-;-;-;- 1016 + 1 1.218 93855.2 1.0 10203 5622 15821 HBL1_DMSO_200M_050219_1,15827 HBL1_DMSO_200M_050219_1,15827,AEYIAQVKGI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15828 77.185 417.0 256380.0 25 0 52570.0 -1 0 59 1097.7977953078648 3290.3715565237944 3 1098.132861316204 MULTI CID FTMS 0 0 0 15821 518419.875 0.8101396007355673 -3 0.2574386596679687 7 3 E 1 -1 6.9897 0.0 0.0 0.21243 0.0 0.0 2634.1431648091134 524.1625190976173 3158.305683906731 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21243 - 66 + 1 1.218 94287.3 1.0 10204 5622 15821 HBL1_DMSO_200M_050219_1,15828 HBL1_DMSO_200M_050219_1,15828, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15829 77.193 453.0 473840.0 25 0 34124.0 + 23774 IVVGASDGIIRV 12 189 599.3615840478292 1196.7086151624585 2 599.8629638552666 MULTI CID FTMS 0 0 0 15821 404058.78125 0.4834181198443805 6 -0.3694534301757812 8 Unmodified _LVASLLPLRES_ ENSG00000137055|ENST00000397292|PLAA 8.745405648335112 0.8338865417133445 3 [{I|L}V]N[RV][{M(Oxidation (M))|F}T]GVV 10 9 31.087 0.0 0.0 2.5977 0.0 0.0 0.0 109.06503541075828 109.06503541075828 17.98840924329106 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 [{I|L}V]N[RV][{M(Oxidation (M))|F}T]GVV 2.5977 - 1238 1 1.218 155111.5 1.0 10205 5622 15821 HBL1_DMSO_200M_050219_1,15829 HBL1_DMSO_200M_050219_1,15829,LVASLLPLRES False False IVVGASDGIIRV 77.192943 599.362 3417263.5 15821.0 ENSG00000137055|ENST00000397292|PLAA 5.816660086313884 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15830 77.197 229.0 532120.0 25 0 41739.0 + 2828 AVADHLFKL 9 122 338.5307472798488 1012.5704124397464 3 338.5306579470634 MULTI CID FTMS 0 0 0 15821 379237.21875 0.6302378210070497 2 -0.1521072387695312 9 Unmodified _AVADHLFKL_ ENSG00000266967|ENST00000427569|AARSD1;ENST00000416949.5_1_17:41109156-41116489:-|nuORF;ENST00000441280.7_1_17:41108193-41116457:-|nuORF;nc|ENSG00000266967|Q9BTE6-2|AARSD1;nc|ENSG00000266967|Q9BTE6-3|AARSD1 32.30548876998284 0.1201446275138228 3 {[VA]|[{I|L}G]}{I|L}EGH{M(Oxidation (M))|F}K{I|L} 9 4 + 57.896 0.0 0.0 5.7178 5.7178 77.457 0.0 0.0 0.0 11.790521660407125 5.316658315635081 5.316658315635081 1.663865622122671 0 0.5682503180159344 2.0 0.4247425010840047 0.2614393726401688 {[VA]|[{I|L}G]}{I|L}EGH{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}{[DA]|[EG]}H{I|L}{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}{I|L}EGH{M(Oxidation (M))|F}{I|L}K;{[VA]|[{I|L}G]}{[DA]|[EG]}{I|L}H{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}{[DA]|[EG]}H{I|L}{M(Oxidation (M))|F}{I|L}K;{[VA]|[{I|L}G]}{[DA]|[EG]}{I|L}H{M(Oxidation (M))|F}{I|L}K;{[VA]|[{I|L}G]}{I|L}{[HG]|PP}V[RD]{M(Oxidation (M))|F};{[VA]|[{I|L}G]}{I|L}EGH[K{I|L}]{M(Oxidation (M))|F};{[VA]|[{I|L}G]}{[DA]|[EG]}H{I|L}[K{I|L}]{M(Oxidation (M))|F};{[VA]|[{I|L}G]}{[DA]|[EG]}{I|L}H[K{I|L}]{M(Oxidation (M))|F} 5.7178;5.5534;5.0823;5.0823;4.918;4.4468;4.0148;3.3105;3.1462;2.675 -;+;-;-;-;-;-;-;-;- + 381 + 1 1.218 100621.3 1.0 10206 5622 15821 HBL1_DMSO_200M_050219_1,15830 HBL1_DMSO_200M_050219_1,15830,AVADHLFKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15831 77.206 499.0 525680.0 25 0 21662.0 + 22230 LPRELWHEI 9 214 596.8269078391198 1191.6392627450396 2 596.8262817263603 MULTI CID FTMS 0 0 0 15821 299647.25 0.9163703990760522 -3 0.2574386596679687 10 Unmodified _LPRELWHEI_ ENSG00000065057|ENST00000651570|NTHL1;ENST00000561841.1_1_16:2089927-2093675:-|nuORF;ENST00000561862.5_1_16:2089927-2090351:-|nuORF;ENST00000562951.5_1_16:2089927-2094062:-|nuORF;ENST00000565406.5_1_16:2089927-2094819:-|nuORF;ENST00000567727.5_1_16:2089927-2093790:-|nuORF;nc|ENSG00000065057|P78549-3|NTHL1;nc|ENSG00000065057|P78549|NTHL1 21.59015148037692 0.2564810811560323 3 [VP]A{I|L}VEWHE{I|L} 10 5 + 53.128 0.0 0.0 4.4584 4.4584 70.552 0.0 0.0 0.0 0.0287518317249535 15.00177667229142 0.0287518317249535 0.0287518317249535 0 0.6989700043360187 0.4814860601221125 0.0 0.0 [VP]A{I|L}VEWHE{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}WHE{I|L};[{I|L}P]G{I|L}VEWHE{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}GEHE{I|L};[VP]A{I|L}D{I|L}WHE{I|L};[{I|L}P]RE{I|L}WHE{I|L};[{I|L}P]R{I|L}EWHE{I|L};[{I|L}P]G{I|L}D{I|L}WHE{I|L};[{I|L}P]RE{I|L}GEHE{I|L};[{I|L}P]R{I|L}EGEHE{I|L} 4.4584;4.456;4.3641;4.2463;4.2058;4.1553;4.135;4.1115;3.9456;3.9253 -;-;-;-;-;+;-;-;-;- + 2589 1 1.218 193112.5 1.0 10207 5622 15821 HBL1_DMSO_200M_050219_1,15831 HBL1_DMSO_200M_050219_1,15831,LPRELWHEI False True LPRELWHEI 77.206058 596.82628172636 3680331.75 15821.0 ENST00000561841.1_1_16:2089927-2093675:-|nuORF;;ENSG00000065057|ENST00000651570|NTHL1;;ENST00000561862.5_1_16:2089927-2090351:-|nuORF;;nc|ENSG00000065057|P78549-3|NTHL1;;ENST00000565406.5_1_16:2089927-2094819:-|nuORF;;ENST00000562951.5_1_16:2089927-2094062:-|nuORF;;ENST00000567727.5_1_16:2089927-2093790:-|nuORF;;nc|ENSG00000065057|P78549|NTHL1 4.8791444301605225 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15832 77.215 495.0 285870.0 25 0 48314.0 + + 38779 KVITDIAGVIPAE 13 190 663.8950339626738 1325.7755149921477 2 663.8959228396416 MULTI CID FTMS 0 0 0 15821 306398.6875 0.5213349566986203 -1 0.08123779296875 11 Unmodified _TVDLRLQPTRK_ ENSG00000163918|ENST00000296273|RFC4;ENST00000479307.5_1_3:186508099-186512490:-|nuORF 2.282774691075616 0.8643776557276657 3 {[TV]|[{I|L}S]}D{I|L} 4 -1 13.173 0.0 0.0 0.99359 0.0 0.0 0.0 894.5249100939631 894.5249100939631 3.2578753875506408 0.0 0.0 0.0 0 0.5 0.8538719643217619 0.0994850021680094 0.0 {[TV]|[{I|L}S]}D{I|L} 0.99359 + + 421 1 1.218 118583.9 1.0 10208 5622 15821 HBL1_DMSO_200M_050219_1,15832 HBL1_DMSO_200M_050219_1,15832,TVDLRLQPTRK False False KVITDIAGVIPAE 77.214814 663.895922839642 1188277.75 15821.0 ENSG00000163918|ENST00000296273|RFC4;;ENST00000479307.5_1_3:186508099-186512490:-|nuORF -0.3762511114279429 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15833 77.225 579.0 614840.0 25 0 86289.0 + 34290 IYPEAVTMF 9 246 543.8533839579866 1085.692214982773 2 543.8536254763603 MULTI CID FTMS 0 0 0 15821 280949.59375 0.4672674771303465 -1 0.08123779296875 12 Unmodified _SLRAKIAKTV_ ENST00000467447.1_1_6:42974755-42975804:+|nuORF;ENSG00000112640|ENST00000485511|PPP2R5D;nc|ENSG00000112640|Q14738-3|PPP2R5D;nc|ENSG00000112640|Q14738-2|PPP2R5D 3.5964929083625545 0.7100006075494749 3 [EP]AV{M(Oxidation (M))|F} 5 9 17.625 0.0 0.0 1.6233 0.0 0.0 0.0 539.395559059198 539.395559059198 1.4266750356873104 0.0 0.0 0.0 0 0.0 0.619788758288394 0.0 0.0 [EP]AV{M(Oxidation (M))|F} 1.6233 - 3725 1 1.218 264715.5 1.0 10209 5622 15821 HBL1_DMSO_200M_050219_1,15833 HBL1_DMSO_200M_050219_1,15833,SLRAKIAKTV False False IYPEAVTMF 77.22496 543.85362547636 6168881.5 15821.0 ENST00000467447.1_1_6:42974755-42975804:+|nuORF;;ENSG00000112640|ENST00000485511|PPP2R5D;;nc|ENSG00000112640|Q14738-3|PPP2R5D;;nc|ENSG00000112640|Q14738-2|PPP2R5D 1.1784508228302002 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15834 77.227 105.0 926280.0 25 0 56458.0 + 10600 FVLEMLDGL 9 150 518.7744392634581 1035.5343255937162 2 518.7756225466728 MULTI CID FTMS 0 0 0 15821 239015.25 0.038390917641798 6 -0.3694534301757812 13 Unmodified _FVLEMLDGL_ REV__ENSG00000164002|ENST00000415550|EXO5 11.640296217721598 0.521594087909532 3 {M(Oxidation (M))|F}V 2 -1 34.464 0.0 0.0 3.3281 0.0 0.0 0.0 786.3606661432249 786.3606661432249 18.243693376743987 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {M(Oxidation (M))|F}V 3.3281 + + 1290 + 1 1.218 79719.5 1.0 10210 5622 15821 HBL1_DMSO_200M_050219_1,15834 HBL1_DMSO_200M_050219_1,15834,FVLEMLDGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15835 77.234 309.0 2448700.0 25 0 542850.0 + 257 ADAPVALVV 9 184 427.7527245006685 853.4908960681371 2 427.7527648806572 MULTI CID FTMS 0 0 0 15821 251787.140625 0.0166090251260945 -8 0.6564254760742188 14 Unmodified _ADAPVALVV_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 67.34385681178166 0.0221257235307089 3 [VP]AADA{I|L}VV 9 4 + 67.062 0.0 0.0 7.8573 7.8573 84.684 0.0 0.0 0.0 7.76422775778849 10.330145895351848 7.76422775778849 2.271212547196626 0 0.8182503180159344 1.3979400086720375 1.079689690656103 0.0 [VP]AADA{I|L}VV;[VP]ADAA{I|L}VV;[VP]AAD{I|L}AVV;[VP]ADA{I|L}AVV;[VP]A{I|L}ADAVV;{[DA]|[EG]}APVA{I|L}VV;{[DA]|[EG]}PVAA{I|L}VV;[VP]AA{I|L}DAVV;{[DA]|[EG]}APV{I|L}AVV;{[DA]|[EG]}PAVA{I|L}VV 7.8573;7.5912;7.4762;7.2101;7.0302;6.9476;6.9349;6.6775;6.5665;6.5635 -;-;-;-;-;+;-;-;-;- + 1520 1 1.218 575684.1 1.0 10211 5622 15821 HBL1_DMSO_200M_050219_1,15835 HBL1_DMSO_200M_050219_1,15835,ADAPVALVV True True ADAPVALVV 77.23402 427.752764880657 181651464.0 15821.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 2.1029950181643167 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15836 77.237 136.0 1085300.0 25 0 101030.0 + 21972 LPPNVQII 8 123 447.2760754538383 892.5375979744765 2 447.2769348025322 MULTI CID FTMS 0 0 0 15821 251403.03125 0.3132130164664556 -3 0.2574386596679687 15 Unmodified _LPPNVQII_ ENSG00000100099|ENST00000398145|HPS4;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000496385.5_1_22:26849136-26861668:-|nuORF;nc|ENSG00000100099|Q9NQG7-2|HPS4;nc|ENSG00000100099|Q9NQG7-3|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4 32.116972079565 0.368454113111938 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}Q{I|L}{I|L} 7 4 + 38.638 0.0 0.0 4.329 4.329 75.148 0.0 0.0 0.0 7.623569832004115 13.934625873455744 7.623569832004115 3.0102999566398125 0 0.8494850021680094 1.0969100130080565 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}Q{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}Q{I|L}{I|L}{I|L};[{I|L}P][NP]VQ{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}[AG]{I|L}{I|L};[{I|L}P][NP]N{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}[AG]{I|L}{I|L}{I|L};[NP]P{I|L}VQ{I|L}{I|L};[{I|L}P][NP]V[AG]{I|L}{I|L};[NP]PV{I|L}Q{I|L}{I|L};[VP][QP]VQ{I|L}{I|L} 4.329;3.9917;3.4748;3.2836;3.1375;2.9463;2.6351;2.4371;2.3866;2.3142 -;-;+;-;-;-;-;-;-;- + 379 1 1.218 116743.5 1.0 10212 5622 15821 HBL1_DMSO_200M_050219_1,15836 HBL1_DMSO_200M_050219_1,15836,LPPNVQII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15837 77.251 800.0 224780.0 25 0 16965.0 -1 0 132 1077.948542912248 2153.8825328912963 2 1078.950122058392 MULTI CID FTMS 0 0 0 15821 175747.828125 1.0 0 0.0 16 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EQY{I|L}PAV 9 -1 51.025 0.0 0.0 2.369 0.0 0.0 0.0 1090.3384404442838 1090.3384404442838 34.04338537512896 0.0 0.0 0.0 0 0.0 1.154901959985743 1.156038390922711 0.9049471895720984 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EQY{I|L}PAV 2.369 - 10475 1 1.218 122801.8 0.7900000214576721 10213 5622 15821 HBL1_DMSO_200M_050219_1,15837 HBL1_DMSO_200M_050219_1,15837, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15838 77.264 800.0 348610.0 25 0 28812.0 + + -1 FQSSAVMAL 9 261 477.2425930677712 952.4706332023424 2 477.2423583865166 MULTI CID FTMS 0 0 0 15821 175871.109375 0.6903571665363427 -1 0.08123779296875 17 Carbamidomethyl (C) _VTQLC(Carbamidomethyl (C))YAV_ ENSG00000275379|ENST00000616365|H3C11;ENSG00000277775|ENST00000618052|H3C7;ENSG00000197409|ENST00000356476|H3C4;ENSG00000197153|ENST00000359303|H3C12;ENSG00000278828|ENST00000685041|H3C10;ENSG00000203811|ENST00000369158|H3C14;ENSG00000275714|ENST00000613854|H3C1;ENSG00000168148|ENST00000366696|H3-4;nc|ENSG00000273213|Q5TEC6|H3-7;ENSG00000203852|ENST00000403683|H3C15;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENSG00000183598|ENST00000331491|H3C13 26.34127834903884 0.4900704351052977 3 [WE]AV[HQ]A{I|L} 8 -1 + 24.614 0.0 0.0 2.5843 2.5843 75.208 0.0 0.0 0.0 2.575156255085389 7.474250108400465 2.575156255085389 6.416506143517747 0 0.0 0.0 0.0 0.0 [WE]AV[HQ]A{I|L};[WE]A[H{I|L}]NA{I|L};[WE]VA[HQ]A{I|L};[WE]A[H{I|L}]QG{I|L};[WE]A[H{I|L}]QAV;[WE]A[H{I|L}]GGA{I|L};[WE]AV[HN]VV;[WE]A[H{I|L}][AG]G{I|L} 2.5843;1.9106;1.6361;1.4097;0.90872;0.66367;0.17994;0.16274 -;-;-;-;-;-;-;- 1454 + 1 1.218 207713.1 0.8899999856948853 10214 5622 15821 HBL1_DMSO_200M_050219_1,15838 HBL1_DMSO_200M_050219_1,15838,VTQLCYAV False False FQSSAVMAL 77.264452 477.242358386517 2749907.0 15821.0 ENSG00000275379|ENST00000616365|H3C11;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000168148|ENST00000366696|H3-4;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13 -0.0668724874655405 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15839 77.27 296.0 516690.0 25 0 40073.0 + 42324 VSWYCTSL 8 167 479.7202780894939 957.4260032457878 2 479.7199279665947 MULTI CID FTMS 0 0 0 15821 169001.28125 1.0 0 0.0 18 Unmodified _VSWYCTSL_ REV__L1PB1_dup6616|chr8:82292382-82293007:-|1.773853938787453|0.0196351871970747|6.5|48.0|29|2|anti-sense 14.581692164780916 0.6954967302934248 3 YPS{I|L} 4 -1 19.262 0.0 0.0 2.0119 0.0 0.0 479.1817572014078 0.0 479.1817572014078 0.0 2.854117549192729 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 YPS{I|L} 2.0119 - 290 + 1 1.218 117229.1 1.0 10215 5622 15821 HBL1_DMSO_200M_050219_1,15839 HBL1_DMSO_200M_050219_1,15839,VSWYCTSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15840 77.285 800.0 162810.0 25 0 12630.0 + 39667 VEEDPLLKIKV 11 197 641.8822122364909 1281.7498715397817 2 641.8850585818291 MULTI CID FTMS 0 0 0 15821 99799.921875 0.0580867005069494 -9 0.6987838745117188 19 Unmodified _VEEDPLLKIKV_ REV__ENSG00000142606|ENST00000378412|MMEL1;REV__nc|ENSG00000142606|Q495T6-2|MMEL1;REV__nc|ENSG00000142606|Q495T6-3|MMEL1 5.731851221503515 0.8481046878870278 3 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}D 5 -1 13.468 0.0 0.0 1.0507 0.0 0.0 0.0 722.4663381748004 722.4663381748004 1.6851382446774998 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}D 1.0507 - 389 1 1.218 102194.3 0.8700000047683716 10216 5622 15821 HBL1_DMSO_200M_050219_1,15840 HBL1_DMSO_200M_050219_1,15840,VEEDPLLKIKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15842 77.289 18.0 3477300.0 25 0 577270.0 40417 VIGFLLAV 8 72 416.2705509744676 830.5265490157352 2 416.2706176638603 MULTI CID FTMS 0 0 0 15841 4401712.0 0.3372144645818524 3 -0.1175765991210937 1 Unmodified _VIGFLLAV_ ENSG00000167165|ENST00000305139|UGT1A6;ENSG00000241119|ENST00000354728|UGT1A9;ENSG00000241635|ENST00000305208|UGT1A1;ENSG00000242366|ENST00000373450|UGT1A8;ENSG00000242515|ENST00000344644|UGT1A10;ENSG00000244122|ENST00000373426|UGT1A7;ENSG00000244474|ENST00000373409|UGT1A4;ENST00000450233.1_1_2:234678284-234681202:+|nuORF;nc|ENSG00000167165|P19224-2|UGT1A6;nc|ENSG00000288702|P35503|UGT1A3;nc|ENSG00000288705|P35504|UGT1A5 24.20995872069341 0.5349487244130675 3 [{I|L}V]PK[Y{I|L}]V 7 4 + 32.311 0.0 0.0 3.8905 3.8905 84.558 0.0 0.0 0.0 6.905236062915705 1.0568393731556114 1.0568393731556114 32.31131118532339 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK[Y{I|L}]V 3.8905 - 83 + 1 1.221 54168.9 1.0 10217 5623 15841 HBL1_DMSO_200M_050219_1,15842 HBL1_DMSO_200M_050219_1,15842,VIGFLLAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15843 77.29 11.0 5619400.0 25 0 552070.0 + 40075 YAFPKSITV 9 92 512.7859778611456 1023.5574027890912 2 513.2875854372978 MULTI CID FTMS 0 0 0 15841 6248800.5 0.521786557684473 4 -0.1508407592773437 2 Unmodified _VGHGRLWVT_ nc|ENSG00000155380|P53985-2|SLC16A1;ENSG00000155380|ENST00000369626|SLC16A1 11.640296217721598 0.521594087909532 3 [KP]S{I|L}T{M(Oxidation (M))|F}D 7 8 26.235 0.0 0.0 2.5631 0.0 0.0 0.0 232.11291971707865 232.11291971707865 1.7976043462963531 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 [KP]S{I|L}T{M(Oxidation (M))|F}D 2.5631 - 173 1 1.221 53188.6 1.0 10218 5623 15841 HBL1_DMSO_200M_050219_1,15843 HBL1_DMSO_200M_050219_1,15843,VGHGRLWVT False False YAFPKSITV 77.290397 513.287585437298 306257632.0 15841.0 nc|ENSG00000155380|P53985-2|SLC16A1;;ENSG00000155380|ENST00000369626|SLC16A1 7.966902256011963 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15844 77.292 12.0 5213700.0 25 0 453710.0 25326 NAINEYRI 8 94 496.7623068136208 991.5100606940416 2 496.7628356814384 MULTI CID FTMS 0 0 0 15841 7286718.5 0.8692138148186939 -2 0.2029876708984375 3 Unmodified _NAINEYRI_ ENSG00000114541|ENST00000398540|FRMD4B;nc|ENSG00000114541|Q9Y2L6-2|FRMD4B 12.531546534597751 0.7257836412119636 3 P{I|L}KG{I|L} 5 6 23.188 0.0 0.0 2.3386 0.0 0.0 465.16179958686376 0.0 465.16179958686376 0.0 -0.3882760685765873 -0.3882760685765873 0.0 0 0.0 0.0 0.0 0.0 P{I|L}KG{I|L} 2.3386 - 386 + 1 1.221 54681.7 1.0 10219 5623 15841 HBL1_DMSO_200M_050219_1,15844 HBL1_DMSO_200M_050219_1,15844,NAINEYRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15845 77.293 23.0 3104600.0 25 0 556730.0 + 24620 MLLTKTKGL 9 100 502.8141525321576 1003.6137521311152 2 502.8145324587822 MULTI CID FTMS 0 0 0 15841 5536922.5 1.0 0 0.0 4 Unmodified _MLLTKTKGL_ REV__ENST00000537559.5_1_3:157188116-157188167:-|nuORF 4.75600775471527 0.7486543447549536 3 {I|L} 1 -1 10.596 0.0 0.0 1.0558 0.0 0.0 872.518672640684 0.0 872.518672640684 0.0 0.918221984730634 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0558 + + 15 + 1 1.221 60773.8 1.0 10220 5623 15841 HBL1_DMSO_200M_050219_1,15845 HBL1_DMSO_200M_050219_1,15845,MLLTKTKGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15846 77.294 14.0 8069800.0 25 0 837020.0 + 3948 DALLKFSHI 9 113 522.2978129180204 1042.5810729028408 2 522.2983276247978 MULTI CID FTMS 0 0 0 15841 4490253.0 0.2355688378349453 -4 0.3791885375976562 5 Unmodified _DALLKFSHI_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 83.42873516780209 0.0166860047644719 3 DA{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L} 9 0 + 101.76 0.0 0.0 9.76 9.76 98.858 0.0 0.0 0.0 67.31266807291405 11.962724883926654 11.962724883926654 41.45365019512085 0 2.274227503252014 1.5228787452803376 1.024227503252014 0.0 + + DA{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L};DVVVK{M(Oxidation (M))|F}SH{I|L};DA{I|L}{I|L}K[C(Carbamidomethyl (C))K][VP];DA{I|L}{I|L}K[KC]G[VP];{[DA]|[EG]}{I|L}{I|L}[R{M(Oxidation (M))|F}][VP]{I|L};DA{I|L}{I|L}{I|L}[{M(Oxidation (M))|F}V]G[VP];W{I|L}{I|L}[RH][YR];[{I|L}A]D{I|L}[R{M(Oxidation (M))|F}][VP]{I|L};DV{I|L}E[W{I|L}]R{I|L};DV{I|L}[R{M(Oxidation (M))|F}]P[PS]{I|L} 9.76;5.7839;5.5208;5.4769;4.7317;4.7305;2.8999;2.7146;2.4323;2.2567 +;-;-;-;-;-;-;-;-;- + 1305 + 1 1.221 90513.5 1.0 10221 5623 15841 HBL1_DMSO_200M_050219_1,15846 HBL1_DMSO_200M_050219_1,15846,DALLKFSHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15847 77.295 22.0 4501300.0 25 0 1074700.0 + 32246 RWPDYVREL 9 62 617.3225132351072 1232.6304735370145 2 617.3231078982353 MULTI CID FTMS 0 0 0 15841 3299130.75 0.6275794843856081 7 -0.3057937622070312 6 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 49.52724829834842 0.0414064571532091 3 [WR]PDYVR{M(Oxidation (M))|F} 8 2 61.776 0.0 0.0 5.0117 0.0 0.0 0.0 110.0596642132829 110.0596642132829 48.67722213736919 0.0 0.0 0.0 0 1.3182503180159344 1.3979400086720375 0.0 1.5228787452803376 [WR]PDYVR{M(Oxidation (M))|F} 5.0117 - 251 1 1.221 80258.5 1.0 10222 5623 15841 HBL1_DMSO_200M_050219_1,15847 HBL1_DMSO_200M_050219_1,15847,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15848 77.296 19.0 3388300.0 25 0 566720.0 + 4074 DAMRLYYV 8 73 515.7543381201868 1029.4941233071736 2 515.7554199099541 MULTI CID FTMS 0 0 0 15841 3279380.25 0.731041764194476 1 -0.0303573608398437 7 Unmodified _DAMRLYYV_ ENSG00000105258|ENST00000221859|POLR2I;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;ENST00000589591.5_1_19:36604659-36605638:-|nuORF;ENST00000592962.5_1_19:36604659-36605276:-|nuORF 28.49450938151212 0.4447307666967534 3 {[DA]|[EG]}MR{I|L}YYV 8 0 + 57.841 0.0 0.0 5.6184 5.6184 90.775 0.0 0.0 0.0 19.665762445130497 26.554556341805764 19.665762445130497 57.841087759491856 0 1.6237125054200234 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}MR{I|L}YYV 5.6184 + + 96 1 1.221 54433.8 1.0 10223 5623 15841 HBL1_DMSO_200M_050219_1,15848 HBL1_DMSO_200M_050219_1,15848,DAMRLYYV False True DAMRLYYV 77.296291 515.755419909954 194542608.0 15841.0 ENST00000592962.5_1_19:36604659-36605276:-|nuORF;;ENSG00000105258|ENST00000221859|POLR2I;;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;;ENST00000589591.5_1_19:36604659-36605638:-|nuORF 7.163507620493571 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15849 77.297 36.0 2225000.0 25 0 313900.0 + 36576 TALLKIEGV 9 89 472.2948718881397 942.5751908430794 2 472.2951537966728 MULTI CID FTMS 0 0 0 15841 2669058.25 0.266435725805389 3 -0.1175765991210937 8 Unmodified _TALLKIEGV_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000329092.12_1_3:197677808-197679492:+|nuORF;ENST00000478069.1_1_4:95290987-95291311:+|nuORF;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 56.17704186161178 0.0281986971544335 3 [TA]{I|L}{I|L}K{[QN]|[E{I|L}]|[KN]}GV 9 0 + 67.374 0.0 0.0 7.1479 7.1479 95.64 0.0 0.0 0.0 28.95750937337162 10.20181229336984 10.20181229336984 67.37388445241912 0 1.1989700043360187 2.0 0.7302046884880937 0.0 + + [TA]{I|L}{I|L}K{[QN]|[E{I|L}]|[KN]}GV 7.1479 + + 474 + 1 1.221 67599.7 1.0 10224 5623 15841 HBL1_DMSO_200M_050219_1,15849 HBL1_DMSO_200M_050219_1,15849,TALLKIEGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15850 77.299 47.0 1776700.0 25 0 244950.0 + 32654 SDAIPGLKI 9 84 457.2713009316498 912.5280489300995 2 457.2714416384697 MULTI CID FTMS 0 0 0 15841 2156304.5 0.756608556504555 1 -0.0303573608398437 9 Unmodified _SDAIPGLKI_ ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15 43.85829265575387 0.0542763391141878 3 {[DS]|[MA]|[CV]|TT}A{I|L} 4 5 29.97 0.0 0.0 3.2843 0.0 0.0 0.0 523.3262416393371 523.3262416393371 14.028105957700898 0.0 0.0 0.0 0 0.9247425010840048 0.5528419686577808 0.2887254899964357 0.0 + {[DS]|[MA]|[CV]|TT}A{I|L} 3.2843 + + 90 1 1.221 69126.2 1.0 10225 5623 15841 HBL1_DMSO_200M_050219_1,15850 HBL1_DMSO_200M_050219_1,15850,SDAIPGLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15851 77.3 39.0 542360.0 25 0 45469.0 -1 GVYPVKMVVR 10 47 582.3351836576426 1162.655814382085 2 582.3356811404228 MULTI CID FTMS 0 0 0 15841 1996646.5 0.8758488206792189 -2 0.2029876708984375 10 Oxidation (M) _GVYPVKM(Oxidation (M))VVR_ ENSG00000091622|ENST00000262483|PITPNM3;nc|ENSG00000091622|Q9BZ71-2|PITPNM3;nc|ENSG00000091622|Q9BZ71-3|PITPNM3 1.844237919475145 0.7181058121064529 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.221 23493.5 1.0 10226 5623 15841 HBL1_DMSO_200M_050219_1,15851 HBL1_DMSO_200M_050219_1,15851,GVYPVKMVVR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15852 77.301 39.0 1465800.0 25 0 165590.0 + 33752 SLALSAITSL 10 108 488.2897350966558 974.5649172601117 2 488.2904540896416 MULTI CID FTMS 0 0 0 15841 1852506.25 0.3852780902916176 1 -0.0303573608398437 11 Unmodified _SLALSAITSL_ REV__ENSG00000170537|ENST00000304381|TMC7;REV__ENST00000568469.5_1_16:18995385-19051723:+|nuORF;REV__nc|ENSG00000170537|Q7Z402-2|TMC7 43.85829265575387 0.1168243637355526 3 [TA]VVTA{I|L}TS{I|L} 10 -1 + 52.031 0.0 0.0 5.3389 5.3389 78.552 0.0 0.0 0.0 3.802112417116064 5.650443574641031 3.802112417116064 3.0102999566398125 0 0.8182503180159344 1.6989700043360187 1.0994850021680094 0.0 [TA]VVTA{I|L}TS{I|L};[TA][VS]{I|L}A{I|L}TS{I|L};{[QN]|[E{I|L}]|[KN]}KTA{I|L}TS{I|L};[VS][{I|L}A]TA{I|L}TS{I|L};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}TA{I|L}TS{I|L};[K{I|L}]ETA{I|L}TS{I|L};[VS][TA]{I|L}A{I|L}TS{I|L};{[TV]|[{I|L}S]}{[SA]|[TG]}{I|L}A{I|L}TS{I|L};[YR]{I|L}A[RP]S{I|L};{[VA]|[{I|L}G]}{[TV]|[{I|L}S]}TA{I|L}TS{I|L} 5.3389;5.03;4.9487;4.8023;4.7806;4.7211;4.4935;4.4717;4.4569;4.441 -;-;-;-;-;-;-;-;-;- 1033 1 1.221 49900.5 1.0 10227 5623 15841 HBL1_DMSO_200M_050219_1,15852 HBL1_DMSO_200M_050219_1,15852,SLALSAITSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15853 77.302 43.0 1980700.0 25 0 193320.0 + 32256 RWPDYVREL 9 94 411.88404851646834 1232.630316149605 3 411.8840209841728 MULTI CID FTMS 0 0 0 15841 1865100.125 0.7007256629720557 7 -0.3057937622070312 12 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 49.55428908609986 0.0413471690215031 3 [WR]PDYV{I|L}{[RE]|[WV]} 9 2 [WR]P + + 43.377 24.604 5.6016 3.5191 3.5191 51.281 0.0 0.0 0.0 0.0 10.797145103202809 0.0 0.0 0 0.9247425010840048 0.0 0.9247425010840048 0.4247425010840047 [WR]PDYV{I|L}{[RE]|[WV]} 3.5191 - 183 + 1 1.221 71704.1 1.0 10228 5623 15841 HBL1_DMSO_200M_050219_1,15853 HBL1_DMSO_200M_050219_1,15853,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15854 77.304 91.0 523480.0 25 0 51148.0 30206 QVVSRVRHTV 10 79 590.8482621041803 1179.6819712751603 2 590.8489257693291 MULTI CID FTMS 0 0 0 15841 1629006.5 1.0 0 0.0 13 Unmodified _QVVSRVRHTV_ ENST00000546413.1_1_12:100558666-100558768:-|nuORF 6.2057823575117 0.6979311171683138 3 E{M(Oxidation (M))|F}Y 3 10 9.9215 0.0 0.0 0.84103 0.0 0.0 218.2583395386356 519.2544039361936 737.5127434748292 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{M(Oxidation (M))|F}Y 0.84103 - 35 + 1 1.221 43616.6 1.0 10229 5623 15841 HBL1_DMSO_200M_050219_1,15854 HBL1_DMSO_200M_050219_1,15854,QVVSRVRHTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15855 77.306 59.0 1603600.0 25 0 285020.0 23682 LTSLYLRKMP 10 97 611.3559007792654 1220.6972486253308 2 611.3564330935478 MULTI CID FTMS 0 0 0 15841 1237502.375 0.3238588446596695 7 -0.3057937622070312 14 Unmodified _LTSLYLRKMP_ ENSG00000125872|ENST00000378858|LRRN4 3.2813086475875832 0.7114585191678878 3 V 1 10 9.732 0.0 0.0 0.79725 0.0 0.0 610.3755918027932 508.22675501041255 1118.6023468132057 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V 0.79725 - 24 + 1 1.221 73993.0 1.0 10230 5623 15841 HBL1_DMSO_200M_050219_1,15855 HBL1_DMSO_200M_050219_1,15855,LTSLYLRKMP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15856 77.307 41.0 3456800.0 25 0 430890.0 + 4084 DANFVIVV 8 122 438.7438019813061 875.4730510294121 2 438.7438842654228 MULTI CID FTMS 0 0 0 15841 1259540.625 0.7928967212149846 -8 0.6208114624023438 15 Unmodified _DANFVIVV_ REV__ENSG00000128581|ENST00000315322|IFT22;REV__ENST00000468833.1_1_7:100959585-100959801:-|nuORF;REV__nc|ENSG00000128581|Q9H7X7-2|IFT22;REV__nc|ENSG00000128581|Q9H7X7-3|IFT22 32.30548876998284 0.3644845974844379 3 ADAVP[YK]{I|L} 8 -1 + 54.11 0.0 0.0 6.1807 6.1807 81.258 0.0 0.0 0.0 42.13787503639775 0.0633462390661776 0.0633462390661776 3.0102999566398125 0 0.8807196863200843 1.3979400086720375 0.0 0.0 ADAVP[YK]{I|L};ADAPV[YK]{I|L};AWV[R{M(Oxidation (M))|F}]VV;ADVAP[YK]{I|L};{[SA]|[TG]}[YQ]P{I|L}VV;V{[DA]|[EG]}AP[YK]{I|L};VY[KQ][EP]{I|L};A[PS]TP[YK]{I|L} 6.1807;5.8368;4.9759;4.7143;1.6496;1.2627;0.81595;0.81469 -;-;-;-;-;-;-;- 332 + 1 1.221 113076.5 1.0 10231 5623 15841 HBL1_DMSO_200M_050219_1,15856 HBL1_DMSO_200M_050219_1,15856,DANFVIVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15857 77.308 56.0 1162000.0 25 0 97253.0 -1 PKMKLPSL 8 104 465.2765336199419 928.538514306684 2 465.2765380740166 MULTI CID FTMS 0 0 0 15841 1234701.25 0.5429418673078595 4 -0.1508407592773437 16 Oxidation (M) _PKM(Oxidation (M))KLPSL_ ENSG00000154309|ENST00000675850|DISP1 39.957323273325 0.2350051964751539 3 K{I|L}PS{I|L} 5 -1 40.481 0.0 0.0 4.3596 0.0 0.0 372.1789084490651 0.0 372.1789084490651 0.0 33.248759908329184 0.0 0.0 0 0.7887254899964358 0.0 0.6139829889124311 0.0 K{I|L}PS{I|L} 4.3596 + + 196 + 1 1.221 54242.9 1.0 10232 5623 15841 HBL1_DMSO_200M_050219_1,15857 HBL1_DMSO_200M_050219_1,15857,PKMKLPSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15858 77.31 81.0 694380.0 25 0 118680.0 30736 RGNPRVRVWAV 11 89 655.3822983569952 1308.7500437807903 2 655.3826782107353 MULTI CID FTMS 0 0 0 15841 1092385.75 0.8049597708295914 -2 0.2029876708984375 17 Unmodified _RGNPRVRVWAV_ ENST00000530973.1_1_11:65111264-65113280:+|nuORF 3.5964929083625545 0.858179447565866 3 WAV 3 8 14.693 0.0 0.0 1.1227 0.0 0.0 934.5552938802028 0.0 934.5552938802028 0.0 7.703037561203844 0.0 0.0 0 0.0 0.0 0.0 0.0 + WAV 1.1227 + + 20 + 1 1.221 56072.3 1.0 10233 5623 15841 HBL1_DMSO_200M_050219_1,15858 HBL1_DMSO_200M_050219_1,15858,RGNPRVRVWAV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15859 77.311 44.0 320360.0 25 0 39388.0 -1 IFIFHCVL 8 38 524.7872783271804 1047.560003721161 2 524.7877075076103 MULTI CID FTMS 0 0 0 15841 1038643.75 0.6201187242099189 -2 0.2029876708984375 18 Carbamidomethyl (C) _IFIFHC(Carbamidomethyl (C))VL_ ENSG00000150471|ENST00000683033|ADGRL3;nc|ENSG00000150471|Q9HAR2-2|ADGRL3;nc|ENSG00000150471|Q9HAR2-4|ADGRL3;nc|ENSG00000150471|Q9HAR2|ADGRL3 2.889219685676258 0.8067950007271085 3 {I|L} 1 -1 13.979 0.0 0.0 1.3345 0.0 0.0 916.4650310422528 0.0 916.4650310422528 0.0 -6.989700043360188 -6.989700043360188 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3345 + + 1 + 1 1.221 20217.0 1.0 10234 5623 15841 HBL1_DMSO_200M_050219_1,15859 HBL1_DMSO_200M_050219_1,15859,IFIFHCVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15860 77.313 77.0 1591400.0 25 0 186230.0 + 20328 LLFEDRFRP 9 113 398.2204207017784 1191.6394327055352 3 398.2205688357353 MULTI CID FTMS 0 0 0 15841 995671.4375 0.923942222491846 1 -0.0303573608398437 19 Unmodified _LLFEDRFRP_ REV__ENST00000587714.1_1_18:59949550-59951479:+|nuORF 15.248480904072842 0.4239247793462406 3 {I|L}{I|L}{M(Oxidation (M))|F}HEG{I|L}NH{I|L} 10 -1 + 56.245 0.0 0.0 4.72 4.72 76.832 0.0 0.0 0.0 16.532125137753432 4.247425010840047 4.247425010840047 3.1439395722196366 0 0.4247425010840047 0.0 0.9247425010840048 0.0 {I|L}{I|L}{M(Oxidation (M))|F}HEG{I|L}NH{I|L};{I|L}{I|L}{M(Oxidation (M))|F}HEGG{[VA]|[{I|L}G]}H{I|L};{I|L}{I|L}{M(Oxidation (M))|F}HEG{I|L}N{I|L}H;{I|L}{I|L}{M(Oxidation (M))|F}EHG{I|L}NH{I|L};{I|L}{I|L}{M(Oxidation (M))|F}HEGG{[VA]|[{I|L}G]}{I|L}H;{[QN]|[E{I|L}]|[KN]}RPGEHE{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}EHGG{[VA]|[{I|L}G]}H{I|L};{I|L}{I|L}{M(Oxidation (M))|F}EHG{I|L}N{I|L}H;{I|L}{I|L}{M(Oxidation (M))|F}HEG{I|L}GGH{I|L};{[QN]|[E{I|L}]|[KN]}RPWHE{I|L}{I|L} 4.72;4.4562;4.3635;4.3196;4.0997;4.0675;4.0558;3.9632;3.9509;3.9197 -;-;-;-;-;-;-;-;-;- 1456 + 1 1.221 100517.4 1.0 10235 5623 15841 HBL1_DMSO_200M_050219_1,15860 HBL1_DMSO_200M_050219_1,15860,LLFEDRFRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15861 77.315 104.0 1023200.0 25 0 103750.0 + 15675 LPFDLQRNV 9 112 550.8032448587251 1099.59193678425 2 551.3063842654228 MULTI CID FTMS 0 0 0 15841 980918.3125 0.8933537845813513 1 -0.0303573608398437 20 Unmodified _IQPHGVFFR_ ENSG00000153487|ENST00000333219|ING1 10.823927491677226 0.5436922275383211 3 P{M(Oxidation (M))|F}D{I|L}Q 5 8 30.261 0.0 0.0 2.752 0.0 0.0 112.07542573106498 384.2011202447876 496.2765459758525 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 P{M(Oxidation (M))|F}D{I|L}Q 2.752 - 771 + 1 1.221 92728.8 1.0 10236 5623 15841 HBL1_DMSO_200M_050219_1,15861 HBL1_DMSO_200M_050219_1,15861,IQPHGVFFR False False LPFDLQRNV 77.315447 551.306384265423 11037704.0 15841.0 ENSG00000153487|ENST00000333219|ING1 5.314253648122151 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15863 77.32 43.0 2595400.0 25 0 306120.0 + 270 ADGLQFEL 8 77 446.7259947997176 891.4374366662352 2 446.7265502810478 MULTI CID FTMS 0 0 0 15862 1008516.4375 0.3167706061456736 -3 0.2333450317382812 1 Unmodified _ADGLQFEL_ REV__ENSG00000148843|ENST00000369797|PDCD11;REV__ENST00000478543.1_1_10:105204236-105205303:+|nuORF 13.90604991867851 0.7054780292895731 3 ADVAN 5 -1 32.423 0.0 0.0 3.6371 0.0 0.0 0.0 418.2096346490844 418.2096346490844 11.453650195120844 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 ADVAN 3.6371 - 104 + 1 1.221 91875.1 1.0 10237 5624 15862 HBL1_DMSO_200M_050219_1,15863 HBL1_DMSO_200M_050219_1,15863,ADGLQFEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15864 77.326 332.0 467440.0 25 0 42954.0 + 44040 YIKWFKLQL 9 170 619.8693062180286 1237.724059502857 2 619.8697997927666 MULTI CID FTMS 0 0 0 15862 186127.03125 0.0685227201188978 8 -0.3945541381835937 2 Unmodified _YIKWFKLQL_ REV__chr6:116462520-116463283|48|16.48|0.7|4.56|+|ENST00000368604|CALHM6,CALHM6;REV__ENSG00000188820|ENST00000368605|CALHM6;REV__nc|ENSG00000188820|Q5R3K3-2|CALHM6 8.593279151180031 0.6146971463335029 3 [KP]{I|L}Y 4 -1 24.693 0.0 0.0 1.995 0.0 0.0 0.0 733.4072924952976 733.4072924952976 6.7609125905568135 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 [KP]{I|L}Y 1.995 - 258 1 1.221 116885.4 1.0 10238 5624 15862 HBL1_DMSO_200M_050219_1,15864 HBL1_DMSO_200M_050219_1,15864,YIKWFKLQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15865 77.327 13.0 1672300.0 25 0 162820.0 12482 GVAQCLRDLV 10 60 537.290713953186 1072.566874973172 2 537.2914306521416 MULTI CID FTMS 0 0 0 15862 1210307.875 0.6431544359691729 -1 0.0303573608398437 3 Unmodified _GVAQCLRDLV_ ENSG00000185453|ENST00000614654|ZSWIM9;nc|ENSG00000185453|Q86XI8|ZSWIM9 6.723162845929126 0.6955379296933136 3 HTV 3 9 17.167 0.0 0.0 1.6006 0.0 0.0 717.381036205397 0.0 717.381036205397 0.0 5.7470044311385 0.0 0.0 0 0.0 0.0 0.0 0.0 HTV 1.6006 - 24 + 1 1.221 24062.4 1.0 10239 5624 15862 HBL1_DMSO_200M_050219_1,15865 HBL1_DMSO_200M_050219_1,15865,GVAQCLRDLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15866 77.329 126.0 603680.0 25 0 51782.0 33878 SLFLDSPVSSV 11 117 575.8032771838244 1149.5920014344488 2 575.8034545779228 MULTI CID FTMS 0 0 0 15862 415782.9375 0.3255678119396794 -6 0.5010452270507812 4 Unmodified _SLFLDSPVSSV_ ENST00000593726.5_1_19:41305451-41305802:+|nuORF 18.1463463914782 0.6576820063886638 3 {[TV]|[{I|L}S]}[PA]TVS 7 7 24.497 0.0 0.0 2.1309 0.0 0.0 0.0 491.2214929718113 491.2214929718113 12.714104455886488 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.4698565171985374 0.0 {[TV]|[{I|L}S]}[PA]TVS 2.1309 - 455 1 1.221 63281.6 1.0 10240 5624 15862 HBL1_DMSO_200M_050219_1,15866 HBL1_DMSO_200M_050219_1,15866,SLFLDSPVSSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15867 77.334 243.0 675150.0 25 0 43689.0 + 33399 SGVEACWR 8 143 454.2092384096185 906.403923886037 2 454.7123290896416 MULTI CID FTMS 0 0 0 15862 427734.21875 0.60997712144884 -3 0.2333450317382812 5 Unmodified _SGVEACWR_ REV__ENSG00000177082|ENST00000434634|WDR73;REV__ENST00000558608.1_1_15:85186703-85189170:-|nuORF;REV__ENST00000559015.5_1_15:85186703-85191289:-|nuORF;REV__ENST00000559126.5_1_15:85186703-85196938:-|nuORF;REV__ENST00000560966.5_1_15:85188615-85189170:-|nuORF 10.823927491677226 0.7510103885582552 3 SGWA{[C(Carbamidomethyl (C))E]|[WC]}VV 8 -1 + 36.82 0.0 0.0 4.0623 4.0623 75.561 0.0 0.0 0.0 21.548052339384355 1.4215905896025305 1.4215905896025305 3.718553028398688 0 0.0 0.0 0.4247425010840047 0.0 SGWA{[C(Carbamidomethyl (C))E]|[WC]}VV;SGAW{[C(Carbamidomethyl (C))E]|[WC]}VV;SQW{[C(Carbamidomethyl (C))E]|[WC]}VV;SGV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[CS]PV;SGW[WC(Carbamidomethyl (C))]{I|L}V;SGVA{[MG]|[TS]}[CS]PV;SGW[WC(Carbamidomethyl (C))]V{I|L};SGA{[WT]|[RM]}[CS]PV;SGAV{[MG]|[TS]}[CS]PV;{[DA]|[EG]}[YR]V{[{M(Oxidation (M))|F}H]|[RQ]} 4.0623;3.652;2.4762;2.4149;2.2427;2.1392;1.9745;1.7851;1.5095;1.482 -;-;-;-;-;-;-;-;-;- 571 + 1 1.221 127382.8 1.0 10241 5624 15862 HBL1_DMSO_200M_050219_1,15867 HBL1_DMSO_200M_050219_1,15867,SGVEACWR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15868 77.337 173.0 355620.0 25 0 40308.0 + 17362 KLYTDFDEI 9 101 572.2822911969902 1142.5500294607805 2 572.2824584841728 MULTI CID FTMS 0 0 0 15862 316281.59375 0.806744909386169 -1 0.0303573608398437 6 Unmodified _KLYTDFDEI_ ENSG00000087470|ENST00000549701|DNM1L;ENST00000551076.5_1_12:32832273-32863873:+|nuORF;nc|ENSG00000087470|O00429-2|DNM1L;nc|ENSG00000087470|O00429-3|DNM1L;nc|ENSG00000087470|O00429-4|DNM1L;nc|ENSG00000087470|O00429-5|DNM1L;nc|ENSG00000087470|O00429-6|DNM1L;nc|ENSG00000087470|O00429-8|DNM1L;nc|ENSG00000087470|O00429-9|DNM1L 26.268140514670165 0.1969607489560049 3 {[QN]|[E{I|L}]|[KN]}VA[HA]{M(Oxidation (M))|F}DE{I|L} 10 5 + 50.986 0.0 0.0 4.4625 4.4625 70.738 0.0 0.0 0.0 0.170333392987807 16.532125137753432 0.170333392987807 0.170333392987807 0 0.4247425010840047 0.0 1.2302046884880935 0.0 {[QN]|[E{I|L}]|[KN]}VA[HA]{M(Oxidation (M))|F}DE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}A[HA]{M(Oxidation (M))|F}DE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}K[HA]{M(Oxidation (M))|F}DE{I|L};[K{I|L}]Y{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}DE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}K[HA]ED{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}VA[HA]ED{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}A[HA]ED{M(Oxidation (M))|F}{I|L};[K{I|L}]Y{[ES]|[DT]|[{I|L}C]}ED{M(Oxidation (M))|F}{I|L};[VP][YK]D{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V][Q{I|L}]D{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L} 4.4625;4.4476;4.3401;4.085;3.4414;3.1921;3.1772;2.8145;2.412;2.0637 -;-;-;+;-;-;-;-;-;- + 340 1 1.221 53045.0 1.0 10242 5624 15862 HBL1_DMSO_200M_050219_1,15868 HBL1_DMSO_200M_050219_1,15868,KLYTDFDEI False True KLYTDFDEI 77.337292 572.282458484173 2509567.0 15862.0 nc|ENSG00000087470|O00429-5|DNM1L;;nc|ENSG00000087470|O00429-6|DNM1L;;nc|ENSG00000087470|O00429-9|DNM1L;;nc|ENSG00000087470|O00429-4|DNM1L;;ENSG00000087470|ENST00000549701|DNM1L;;nc|ENSG00000087470|O00429-3|DNM1L;;ENST00000551076.5_1_12:32832273-32863873:+|nuORF;;nc|ENSG00000087470|O00429-8|DNM1L;;nc|ENSG00000087470|O00429-2|DNM1L 4.941343069076538 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15869 77.339 63.0 655880.0 25 0 46772.0 + 16200 IVIQQDDEIRL 11 70 671.37177220472 1340.7289914762398 2 671.3706542849541 MULTI CID FTMS 0 0 0 15862 301712.75 0.3055772518136394 -5 0.4095458984375 7 Unmodified _IVIQQDDEIRL_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000525455.5_1_11:62530233-62533976:+|nuORF;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 55.23464941255904 0.0886405999673349 3 [{I|L}V]{I|L}QQDDE{I|L}[R{I|L}] 11 0 + 94.328 0.0 0.0 7.0356 7.0356 90.13 0.0 0.0 0.0 88.84366705142736 5.862435673934286 5.862435673934286 9.128498242811006 0 0.9247425010840048 1.6989700043360187 0.805462187404089 0.805462187404089 + + [{I|L}V]{I|L}QQDDE{I|L}[R{I|L}];[{I|L}V]{I|L}Q[AG]DDE{I|L}[R{I|L}];[{I|L}V]{I|L}[AG]QDDE{I|L}[R{I|L}];[{I|L}V]{I|L}[AG][AG]DDE{I|L}[R{I|L}] 7.0356;6.3547;6.3547;5.6761 +;-;-;- + 107 + 1 1.221 37196.0 1.0 10243 5624 15862 HBL1_DMSO_200M_050219_1,15869 HBL1_DMSO_200M_050219_1,15869,IVIQQDDEIRL True True IVIQQDDEIRL 77.338853 671.370654284954 19183580.0 15862.0 ENST00000526368.1_1_11:62530297-62533976:+|nuORF;;ENSG00000168002|ENST00000301788|POLR2G;;ENST00000527435.5_1_11:62529161-62533976:+|nuORF;;ENST00000525455.5_1_11:62530233-62533976:+|nuORF 7.454350153605143 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15870 77.343 245.0 481010.0 25 0 77229.0 + + 23772 IARVLTVI 8 120 442.7998189850632 883.5850850369264 2 442.7996093630791 MULTI CID FTMS 0 0 0 15862 228768.28125 0.0107711245836321 -7 0.539703369140625 8 Unmodified _LVARTLLV_ ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENSG00000136942|ENST00000348462|RPL35 50.855029805455786 0.1352255786796883 3 [{I|L}A]RV{I|L}TV{I|L} 8 -1 + 50.808 0.0 0.0 5.7502 5.7502 77.976 0.0 0.0 0.0 2.260047093875137 14.904630595263413 2.260047093875137 1.7731749024395782 0 0.9247425010840048 0.8860566476931632 0.5 0.2396518287104437 [{I|L}A]RV{I|L}TV{I|L};[{I|L}A]RVT{I|L}V{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}V{I|L};[{I|L}A]R{I|L}VTV{I|L};[{I|L}A]R{I|L}S{I|L}V{I|L};[{I|L}A]RV{I|L}S{I|L}{I|L};[{I|L}A]RVTV{I|L}{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S{I|L}{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}TV{I|L}{I|L} 5.7502;5.5495;5.4944;5.2937;4.8632;4.6625;4.0784;3.8777;3.8226;3.622 -;-;-;-;-;-;-;-;-;- 464 1 1.221 94961.1 1.0 10244 5624 15862 HBL1_DMSO_200M_050219_1,15870 HBL1_DMSO_200M_050219_1,15870,LVARTLLV False False IARVLTVI 77.343422 442.799609363079 781630320.0 15862.0 ENST00000487431.1_1_9:127620199-127623861:-|nuORF;;ENSG00000136942|ENST00000348462|RPL35 1.3851756652196248 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15871 77.345 70.0 416230.0 25 0 28646.0 10802 FYRQNWRFLS 10 79 708.8639705033731 1415.7133880735462 2 708.8665038943291 MULTI CID FTMS 0 0 0 15862 213587.96875 0.5437297433311353 -1 0.0303573608398437 9 Unmodified _FYRQNWRFLS_ ENST00000512260.5_2_5:175603743-175612170:-|nuORF;ENST00000515403.5_2_5:175603393-175612140:-|nuORF 3.944395688203298 0.708391353636983 3 {[TV]|[{I|L}S]}{I|L}S 4 8 24.781 0.0 0.0 1.7505 0.0 0.0 0.0 1012.4579919155962 1012.4579919155962 11.047575072713157 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}{I|L}S 1.7505 - 116 1 1.221 26694.0 1.0 10245 5624 15862 HBL1_DMSO_200M_050219_1,15871 HBL1_DMSO_200M_050219_1,15871,FYRQNWRFLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15873 77.349 3.8 10360000.0 25 0 1865000.0 27595 PLDRLKVF 8 56 494.30146447891576 986.5883760246315 2 494.3004943728447 MULTI CID FTMS 0 0 0 15872 8585516.0 1.0 0 0.0 1 Unmodified _PLDRLKVF_ ENSG00000125648|ENST00000301454|SLC25A23;nc|ENSG00000125648|Q9BV35-2|SLC25A23;nc|ENSG00000125648|Q9BV35-3|SLC25A23;nc|ENSG00000125648|Q9BV35-4|SLC25A23 6.354104778181461 0.7857632046190106 3 V 1 7 10.713 0.0 0.0 1.0859 0.0 0.0 869.5091809336144 0.0 869.5091809336144 0.0 6.73393743112328 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.0859 + + 6 + 1 1.221 40314.6 1.0 10246 5625 15872 HBL1_DMSO_200M_050219_1,15873 HBL1_DMSO_200M_050219_1,15873,PLDRLKVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15874 77.35 5.4 12533000.0 25 0 987900.0 + 10494 FTVDQIRAI 9 88 531.8007737843036 1061.586994635407 2 531.8009521365166 MULTI CID FTMS 0 0 0 15872 8424142.0 0.8703122326810372 2 -0.0908279418945312 2 Unmodified _FTVDQIRAI_ ENSG00000167658|ENST00000309311|EEF2;ENST00000594885.1_1_19:3984132-3985378:-|nuORF 13.90604991867851 0.4602628045680013 3 {I|L}QDVET 6 8 32.708 0.0 0.0 3.0811 0.0 0.0 358.2357655255875 0.0 358.2357655255875 0.0 22.79328870378253 0.0 0.0 0 0.4291746928241126 0.0 0.0 0.0 {I|L}QDVET 3.0811 - 49 1 1.221 63567.7 1.0 10247 5625 15872 HBL1_DMSO_200M_050219_1,15874 HBL1_DMSO_200M_050219_1,15874,FTVDQIRAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15875 77.352 20.0 2580400.0 25 0 222300.0 + 21718 LPLSSLTHV 9 79 483.7841440694573 965.5537352057146 2 483.7848388552666 MULTI CID FTMS 0 0 0 15872 1998767.125 0.8736463105724285 3 -0.1876907348632812 3 Unmodified _LPLSSLTHV_ ENSG00000115942|ENST00000234296|ORC2 42.09456458481378 0.0639583784996157 3 {I|L}P{I|L}S{[TV]|[{I|L}S]}HS{I|L} 9 3 + 73.087 0.0 0.0 7.5694 7.5694 87.924 0.0 0.0 0.0 35.33498214479485 4.854771935914002 4.854771935914002 4.854771935914002 0 0.7134679910804405 2.0 0.6109243748081782 0.0 {I|L}P{I|L}S{[TV]|[{I|L}S]}HS{I|L};{I|L}P{I|L}S{[TV]|[{I|L}S]}THV;{I|L}P{I|L}S{[TV]|[{I|L}S]}HTV;{I|L}P{I|L}{[WT]|[RM]}HS{I|L};{I|L}P{I|L}{[WT]|[RM]}THV;{I|L}P{I|L}{[WT]|[RM]}HTV;{I|L}P{I|L}[QP][QA]S{I|L};{I|L}P{I|L}[QP][QA]TV;{I|L}[{I|L}T]{I|L}DRHV 7.5694;7.0666;6.9933;6.8985;6.3957;6.3224;6.1216;5.5455;1.6567 -;+;-;-;-;-;-;-;- + 192 + 1 1.221 45318.6 1.0 10248 5625 15872 HBL1_DMSO_200M_050219_1,15875 HBL1_DMSO_200M_050219_1,15875,LPLSSLTHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15876 77.353 24.0 2097800.0 25 0 223670.0 + 28533 PTPHVDPTI 9 91 488.7595805755908 975.5046082179816 2 488.7597534060478 MULTI CID FTMS 0 0 0 15872 1379642.875 0.3026928260234022 -5 0.364532470703125 4 Unmodified _PTPHVDPTI_ ENST00000476089.1_1_2:182321937-182323202:+|nuORF 28.486842064014134 0.1687311288560894 3 PT{I|L} 3 6 31.559 0.0 0.0 3.2352 0.0 0.0 646.3096141767691 0.0 646.3096141767691 0.0 6.748650278674049 0.0 0.0 0 0.5 0.0 0.6382104921644451 0.0 + PT{I|L} 3.2352 + + 70 + 1 1.221 47112.7 1.0 10249 5625 15872 HBL1_DMSO_200M_050219_1,15876 HBL1_DMSO_200M_050219_1,15876,PTPHVDPTI False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15877 77.354 53.0 919550.0 25 0 143180.0 33210 SFKRRYPRR 9 70 633.3689732899979 1264.7233936467958 2 633.3692504763603 MULTI CID FTMS 0 0 0 15872 1058866.25 0.3268146813883539 -11 0.8381881713867188 5 Unmodified _SFKRRYPRR_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 2.059750862983233 0.8427793054688888 3 {I|L} 1 9 10.485 0.0 0.0 0.829 0.0 0.0 1133.6282378624192 0.0 1133.6282378624192 0.0 7.296962438796157 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.829 - 18 + 1 1.221 44321.6 1.0 10250 5625 15872 HBL1_DMSO_200M_050219_1,15877 HBL1_DMSO_200M_050219_1,15877,SFKRRYPRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15878 77.355 35.0 1253300.0 25 0 177930.0 + 2562 ASFNDTFVHV 10 84 568.7723329720903 1135.5301130109806 2 568.7725707888603 MULTI CID FTMS 0 0 0 15872 978173.75 0.0376730418312162 11 -0.7536163330078125 6 Unmodified _ASFNDTFVHV_ ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF 49.93300154707207 0.0805441195901191 3 {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}VVH 10 2 + 75.14 0.0 0.0 6.6172 6.6172 91.393 0.0 0.0 0.0 61.79509022324864 8.860566476931638 8.860566476931638 12.659389507179355 0 0.3054621874040891 1.0969100130080565 0.7614393726401688 0.3494850021680094 {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}VVH;{[SA]|[TG]}{M(Oxidation (M))|F}GGDT{M(Oxidation (M))|F}VVH;{[ES]|[DT]|[{I|L}C]}[RK]TDN{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDN{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}[RK]TDGG{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDGG{[WT]|[RM]};[WH]NM[DV]VVH;[WH]VN[MD]VVH;[WH]NV[MD]VVH;[WH]GGM[DV]VVH 6.6172;5.5023;2.6651;2.4854;1.8542;1.6745;1.337;1.1416;0.98653;0.52606 -;-;-;-;-;-;-;-;-;- 138 + 1 1.221 42200.0 1.0 10251 5625 15872 HBL1_DMSO_200M_050219_1,15878 HBL1_DMSO_200M_050219_1,15878,ASFNDTFVHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15879 77.357 85.0 742740.0 25 0 111280.0 -1 LSKLVNSLYP 10 99 588.33538923541 1174.65622553762 2 588.3359252810478 MULTI CID FTMS 0 0 0 15872 950183.75 0.2966351841506315 13 -0.9444961547851562 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSKLVNSLYP_ ENSG00000149591|ENST00000392951|TAGLN;ENST00000533863.1_2_11:117074025-117074655:+|nuORF 2.9952420565917617 0.7127817445270067 3 {I|L} 1 -1 10.089 0.0 0.0 0.85886 0.0 0.0 1043.561252858712 0.0 1043.561252858712 0.0 0.1738105312960591 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.85886 + + 37 + 1 1.221 51749.8 1.0 10252 5625 15872 HBL1_DMSO_200M_050219_1,15879 HBL1_DMSO_200M_050219_1,15879,LSKLVNSLYP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15880 77.36 109.0 761300.0 25 0 62724.0 + 25118 MQAERIFSEV 10 111 605.300292387165 1208.58603184113 2 605.3007690310478 MULTI CID FTMS 0 0 0 15872 812350.0 1.0 0 0.0 8 Unmodified _MQAERIFSEV_ ENSG00000004897|ENST00000066544|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 68.75988807550267 0.0189765623365881 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[TP]S{I|L}{M(Oxidation (M))|F}SEV 11 3 + 80.451 0.0 0.0 6.6567 6.6567 78.335 0.0 0.0 0.0 20.00837383295313 46.06586960119406 20.00837383295313 0.3829700549787844 0 1.5629529932484498 0.8860566476931632 0.0 0.6989700043360187 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[TP]S{I|L}{M(Oxidation (M))|F}SEV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AER{I|L}{M(Oxidation (M))|F}SEV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[TP]S{I|L}{M(Oxidation (M))|F}SPM;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AER{I|L}{M(Oxidation (M))|F}SPM;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[TP]S{I|L}{M(Oxidation (M))|F}[{I|L}A]M;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AER{I|L}{M(Oxidation (M))|F}[{I|L}A]M;{NN|[MP]|[D{I|L}]|[EV]}S[VG]GS{I|L}{M(Oxidation (M))|F}SEV;{[ES]|[DT]|[{I|L}C]}V[VG]GS{I|L}{M(Oxidation (M))|F}SEV;{[ES]|[DT]|[{I|L}C]}V[VG]GS{I|L}{M(Oxidation (M))|F}SPM;[NP]{M(Oxidation (M))|F}{I|L}GS{I|L}{M(Oxidation (M))|F}SPM 6.6567;6.625;5.9196;5.8879;4.5771;4.5454;4.4021;4.1074;3.3703;3.2826 -;+;-;-;-;-;-;-;-;- + 581 1 1.221 63054.0 1.0 10253 5625 15872 HBL1_DMSO_200M_050219_1,15880 HBL1_DMSO_200M_050219_1,15880,MQAERIFSEV True True MQAERIFSEV 77.359559 605.300769031048 7019568.0 15872.0 ENSG00000004897|ENST00000066544|CDC27;;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;;nc|ENSG00000004897|P30260-2|CDC27 6.547110239664714 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15881 77.362 136.0 435450.0 25 0 70738.0 -1 VECYHCEV 8 114 548.2148608726525 1094.4151688121049 2 548.2156860232353 MULTI CID FTMS 0 0 0 15872 794421.375 1.0 0 0.0 9 2 Carbamidomethyl (C) _VEC(Carbamidomethyl (C))YHC(Carbamidomethyl (C))EV_ ENST00000474665.1_1_3:45707185-45715939:+|nuORF 5.760428011301431 0.7893668129297577 3 TV 2 -1 17.083 0.0 0.0 1.5609 0.0 0.0 876.2880763822205 0.0 876.2880763822205 0.0 5.973936379523561 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 TV 1.5609 - 70 + 1 1.221 54270.3 1.0 10254 5625 15872 HBL1_DMSO_200M_050219_1,15881 HBL1_DMSO_200M_050219_1,15881,VECYHCEV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15882 77.364 77.0 1285500.0 25 0 146910.0 + 3951 DALLKFSHI 9 116 348.53418124881125 1042.5807143466338 3 348.5343505740166 MULTI CID FTMS 0 0 0 15872 338702.0625 0.1060562169677171 -5 0.364532470703125 10 Unmodified _DALLKFSHI_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 65.23502041540118 0.0231836506122253 3 {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L} 9 0 + 90.569 0.0 0.0 8.687 8.687 89.076 0.0 0.0 0.0 19.9118525584814 4.449365713482621 4.449365713482621 4.449365713482621 0 0.6549471895720984 2.0 1.4049471895720984 0.3807196863200844 + + {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L};{[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}S{I|L}H;{[DA]|[EG]}{I|L}{I|L}{I|L}[RP][{M(Oxidation (M))|F}V];W{I|L}{I|L}[RH][YR] 8.687;8.2603;4.2153;2.7395 +;-;-;- + 343 + 1 1.221 85027.1 1.0 10255 5625 15872 HBL1_DMSO_200M_050219_1,15882 HBL1_DMSO_200M_050219_1,15882,DALLKFSHI True True DALLKFSHI 77.364103 348.534350574017 493088721.0 15872.0 nc|ENSG00000139644|P55061-2|TMBIM6;;ENSG00000139644|ENST00000267115|TMBIM6 7.127543449401856 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15883 77.373 502.0 517210.0 25 0 61338.0 + 32396 RYTMWCCAEV 10 217 421.1764117637464 1260.5074058914392 3 421.1769286990166 MULTI CID FTMS 0 0 0 15872 336356.5 1.0 0 0.0 11 Unmodified _RYTMWCCAEV_ REV__ENSG00000131398|ENST00000477616|KCNC3 3.5870582119611467 0.710044248540513 3 GYWVG 5 -1 25.177 0.0 0.0 1.9974 0.0 0.0 282.06043144800475 413.1605929010376 695.2210243490423 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 GYWVG 1.9974 - 3239 + 1 1.221 208411.0 1.0 10256 5625 15872 HBL1_DMSO_200M_050219_1,15883 HBL1_DMSO_200M_050219_1,15883,RYTMWCCAEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15884 77.38 371.0 255250.0 25 0 67677.0 -1 0 54 1009.454674295406 0 1009.454089343548 PEAK CID FTMS 0 0 0 15872 314959.6875 1.0 0 0.0 12 3 VA 2 -1 6.1979 0.0 0.0 0.3073 0.0 0.0 1026.4116410835595 817.3673189752561 1843.778960058816 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA 0.3073 - 28 + 1 1.221 74793.3 1.0 10257 5625 15872 HBL1_DMSO_200M_050219_1,15884 HBL1_DMSO_200M_050219_1,15884, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15885 77.386 368.0 130360.0 25 0 9814.5 -1 0 75 821.0728029814189 0 821.4098998904228 PEAK CID FTMS 0 0 0 15872 116966.78125 0.6985615883949107 1 -0.0575637817382812 13 3 WK{I|L}{M(Oxidation (M))|F} 4 -1 15.918 0.0 0.0 0.97051 0.0 0.0 327.4945403034181 735.3289278619749 1062.823468165393 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WK{I|L}{M(Oxidation (M))|F} 0.97051 - 88 + 1 1.221 43939.9 1.0 10258 5625 15872 HBL1_DMSO_200M_050219_1,15885 HBL1_DMSO_200M_050219_1,15885, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15886 77.395 522.0 585430.0 25 0 51175.0 + 40388 VICPATLPSL 10 226 507.2871405317021 1012.559728130204 2 507.7909423708916 MULTI CID FTMS 0 0 0 15872 161961.3125 0.2011843208612994 22 -1.7459793090820312 14 Unmodified _VICPATLPSL_ REV__ENSG00000142178|ENST00000270162|SIK1 32.30548876998284 0.2428506522065767 3 [{I|L}V]WW{I|L} 5 -1 22.504 0.0 0.0 2.2225 0.0 0.0 0.0 312.1525585739776 312.1525585739776 5.0127146077463145 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]WW{I|L} 2.2225 - 5694 1 1.221 232260.9 1.0 10259 5625 15872 HBL1_DMSO_200M_050219_1,15886 HBL1_DMSO_200M_050219_1,15886,VICPATLPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15887 77.403 395.0 394010.0 25 0 63485.0 28048 PPAVSTTKI 9 88 913.5354678751752 912.5281914085753 1 913.535205066204 MULTI CID FTMS 0 0 0 15872 144814.109375 0.3634021766560376 3 -0.1876907348632812 15 Unmodified _PPAVSTTKI_ ENSG00000117114|ENST00000686636|ADGRL2;nc|ENSG00000117114|O95490-2|ADGRL2;nc|ENSG00000117114|O95490-3|ADGRL2;nc|ENSG00000117114|O95490-4|ADGRL2;nc|ENSG00000117114|O95490-5|ADGRL2;nc|ENSG00000117114|O95490-6|ADGRL2;nc|ENSG00000117114|O95490-7|ADGRL2;nc|ENSG00000117114|O95490|ADGRL2 16.942295170755138 0.3780752226737986 3 T{I|L}{M(Oxidation (M))|F}GD{[QN]|[E{I|L}]|[KN]} 7 8 16.04 0.0 0.0 1.7578 0.0 0.0 119.16150090836716 0.0 119.16150090836716 0.0 -2.135088109247949 -2.135088109247949 0.0 0 0.0 0.0 0.2887254899964357 0.0 T{I|L}{M(Oxidation (M))|F}GD{[QN]|[E{I|L}]|[KN]} 1.7578 - 413 + 1 1.221 111978.6 1.0 10260 5625 15872 HBL1_DMSO_200M_050219_1,15887 HBL1_DMSO_200M_050219_1,15887,PPAVSTTKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15889 77.407 15.0 4089400.0 25 0 664970.0 + 43668 YARQLEMIV 9 70 561.80329281635 1121.5920326995 2 561.8032104372978 MULTI CID FTMS 0 0 0 15888 1747746.125 0.4929482020360195 1 -0.03326416015625 1 Unmodified _YARQLEMIV_ ENSG00000099341|ENST00000215071|PSMD8 29.081581746732265 0.1611639662936252 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[Q{I|L}]EM{I|L}V 9 0 + 38.069 0.0 0.0 3.3942 3.3942 83.577 0.0 0.0 0.0 0.6458996192598292 27.09954981438068 0.6458996192598292 38.06864994446124 0 0.8494850021680094 0.0 0.0 0.3252574989159953 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[Q{I|L}]EM{I|L}V 3.3942 + + 121 1 1.221 50113.9 1.0 10261 5626 15888 HBL1_DMSO_200M_050219_1,15889 HBL1_DMSO_200M_050219_1,15889,YARQLEMIV False True YARQLEMIV 77.406794 561.803210437298 25238312.0 15888.0 ENSG00000099341|ENST00000215071|PSMD8 4.369367599487305 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15890 77.408 51.0 1953200.0 25 0 138110.0 + 32058 RVLEKPESLLL 11 103 432.9338057776429 1295.7795879331288 3 432.9342529177666 MULTI CID FTMS 0 0 0 15888 490184.125 0.4122888036981871 3 -0.1374435424804687 2 Unmodified _RVLEKPESLLL_ ENSG00000137221|ENST00000372449|TJAP1;ENST00000454762.1_1_6:43472456-43473590:+|nuORF;nc|ENSG00000137221|Q5JTD0-2|TJAP1;nc|ENSG00000137221|Q5JTD0-4|TJAP1 16.13717665003241 0.6994749584679478 3 [{I|L}P]K{[TV]|[{I|L}S]}S[EP]S{I|L}{I|L}{I|L} 12 5 + 29.749 0.0 0.0 2.2959 2.2959 67.858 0.0 0.0 0.0 3.7135567771539257 -1.3296389810070188 -1.3296389810070188 1.249387366082999 0 0.2614393726401688 1.5228787452803376 0.8807196863200843 0.0 [{I|L}P]K{[TV]|[{I|L}S]}S[EP]S{I|L}{I|L}{I|L};[{I|L}P]K{[TV]|[{I|L}S]}P{[ES]|[DT]|[{I|L}C]}S{I|L}{I|L}{I|L};[{I|L}P]K{[TV]|[{I|L}S]}{I|L}{[CP]|[EA]}S{I|L}{I|L}{I|L};[{I|L}P]K{[TV]|[{I|L}S]}SS[EP]{I|L}{I|L}{I|L};[{I|L}P]K{[TV]|[{I|L}S]}P[TA]M{I|L}{I|L}{I|L};[RV]{I|L}EK[EP]S{I|L}{I|L}{I|L};[{I|L}P]K{[TV]|[{I|L}S]}S{I|L}S[EP]{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}[PS]K[EP]S{I|L}{I|L}{I|L};[{I|L}V]REK[EP]S{I|L}{I|L}{I|L};[{I|L}P]K{[TV]|[{I|L}S]}PV{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}{I|L} 2.2959;2.1994;2.1247;1.7564;1.7348;1.7055;1.6756;1.6722;1.6091;1.5989 -;-;-;-;-;+;-;-;-;- + 1270 1 1.221 90295.9 1.0 10262 5626 15888 HBL1_DMSO_200M_050219_1,15890 HBL1_DMSO_200M_050219_1,15890,RVLEKPESLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15891 77.415 366.0 647780.0 25 0 45210.0 -1 0 176 644.6571323982859 1930.9495677950567 3 644.9913818240166 MULTI CID FTMS 0 0 0 15888 349552.53125 0.4663332090409688 1 -0.03326416015625 3 3 {[DA]|[EG]}V{I|L}{M(Oxidation (M))|F}P 6 -1 46.872 0.0 0.0 2.4274 0.0 0.0 0.0 1285.6328484356698 1285.6328484356698 8.871787860060735 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V{I|L}{M(Oxidation (M))|F}P 2.4274 - 1444 + 1 1.221 178273.5 1.0 10263 5626 15888 HBL1_DMSO_200M_050219_1,15891 HBL1_DMSO_200M_050219_1,15891, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15892 77.42 258.0 620980.0 25 0 59568.0 + -1 VAEMYWTV 8 184 507.7335539391858 1013.4525549451716 2 507.7335998415947 MULTI CID FTMS 0 0 0 15888 147163.890625 0.4545300949126158 -1 0.0575637817382812 4 Oxidation (M) _VAEM(Oxidation (M))YWTV_ REV__ENSG00000167972|ENST00000301732|ABCA3;REV__ENST00000563623.5_1_16:2339371-2378589:-|nuORF 20.871210003555333 0.6025813472596342 3 {[VA]|[{I|L}G]}GPPY{I|L} 7 -1 22.457 0.0 0.0 2.2158 0.0 0.0 0.0 313.0482999421018 313.0482999421018 -0.9083360464390432 0.0 -0.9083360464390432 0.0 0 0.3494850021680094 1.3010299956639813 0.0 0.0 {[VA]|[{I|L}G]}GPPY{I|L} 2.2158 - 3234 1 1.221 128224.9 1.0 10264 5626 15888 HBL1_DMSO_200M_050219_1,15892 HBL1_DMSO_200M_050219_1,15892,VAEMYWTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15893 77.428 453.0 270600.0 25 0 38617.0 + 12716 GVLSTVNSP 9 116 873.4679431465515 872.4606666799515 1 873.4717285037041 MULTI CID FTMS 0 0 0 15888 150911.265625 0.0837615251091326 -8 0.5882644653320312 5 Unmodified _GVLSTVNSP_ REV__ENSG00000183354|ENST00000399933|KIAA2026;REV__ENST00000540714.1_1_9:5919686-5933837:-|nuORF 23.1484247019978 0.2366544122328345 3 [VP]AATV[C(Carbamidomethyl (C))R] 8 -1 + 43.338 0.0 0.0 4.9673 4.9673 80.131 0.0 0.0 0.0 16.065374126544256 -0.9780546681699676 -0.9780546681699676 5.198405410982616 0 0.0 0.9208187539523752 0.3494850021680094 0.0 [VP]AATV[C(Carbamidomethyl (C))R];[VP]AAS{I|L}[C(Carbamidomethyl (C))R];[VP]A{I|L}AS[C(Carbamidomethyl (C))R];[VP]AA{I|L}S[C(Carbamidomethyl (C))R];[VP]A{I|L}GT[C(Carbamidomethyl (C))R];[VP]AAVT[C(Carbamidomethyl (C))R];[VP]AATTQ[VS];{[VA]|[{I|L}G]}PATV[C(Carbamidomethyl (C))R];[VP][VG]SV[C(Carbamidomethyl (C))R];[{I|L}A]PGTV[C(Carbamidomethyl (C))R] 4.9673;4.3715;4.2005;3.9987;3.9322;3.7304;3.1804;2.5982;2.5639;2.4731 -;-;-;-;-;-;-;-;-;- 3652 1 1.221 86983.6 1.0 10265 5626 15888 HBL1_DMSO_200M_050219_1,15893 HBL1_DMSO_200M_050219_1,15893,GVLSTVNSP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15894 77.436 465.0 352480.0 25 0 23385.0 + 45715 YYFDRDDVAL 10 170 638.7959865395435 1275.577420145887 2 639.2983276247978 MULTI CID FTMS 0 0 0 15888 138714.78125 0.2260912487398834 3 -0.1374435424804687 6 Unmodified _YYFDRDDVAL_ ENSG00000167996|ENST00000273550|FTH1;ENST00000533138.1_1_11:61732822-61734897:-|nuORF;ENST00000534719.1_1_11:61732389-61734897:-|nuORF 29.84058131909904 0.2982332456971691 3 [VP]Y{[C(Carbamidomethyl (C))E]|[WC]}YYVA{I|L} 10 7 + 54.218 0.0 0.0 4.2505 4.2505 83.976 0.0 0.0 0.0 12.156366524931386 17.719932023307834 12.156366524931386 14.084850188786504 0 0.5 1.154901959985743 0.3054621874040891 0.0 [VP]Y{[C(Carbamidomethyl (C))E]|[WC]}YYVA{I|L};YY[WY]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HA{I|L};[YV]P{[C(Carbamidomethyl (C))E]|[WC]}YYVA{I|L};[{I|L}T]{NN|[MP]|[D{I|L}]|[EV]}CCYYVA{I|L};[{I|L}P][MT]CCYYVA{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VVCCYYVA{I|L};[QT]MP{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))E]|[WC]}PM{I|L};[KT]MP[DC]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HA{I|L};[KT]M{M(Oxidation (M))|F}C(Carbamidomethyl (C))[PG]DHA{I|L};[VP]Y{[C(Carbamidomethyl (C))E]|[WC]}{[VA]|[{I|L}G]}PM[NP] 4.2505;3.1463;3.1091;2.2709;2.2287;1.7416;1.5411;1.4664;1.4638;1.4306 -;-;-;-;-;-;-;-;-;- 1702 1 1.221 122066.6 1.0 10266 5626 15888 HBL1_DMSO_200M_050219_1,15894 HBL1_DMSO_200M_050219_1,15894,YYFDRDDVAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15896 77.44 16.0 3329300.0 25 0 394500.0 + 28854 QAIERYLVV 9 93 545.8166719308654 1089.6187909285306 2 546.3079101443291 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _QAIERYLVV_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000470302.5_1_2:230656574-230657731:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 10.073929032068715 0.563993802247229 3 [QA]Y{I|L}V[W{I|L}]VV 9 4 + 43.712 0.0 0.0 4.0117 4.0117 74.231 0.0 0.0 0.0 25.730488337540688 11.082268588648247 11.082268588648247 3.0102999566398125 0 0.2396518287104437 0.721246399047171 0.0 0.0 [QA]Y{I|L}V[W{I|L}]VV;[QA]{I|L}YV[W{I|L}]VV;[QA]Y{I|L}VV[W{I|L}]V;[QA]{I|L}YVV[W{I|L}]V;[QA]Y{I|L}VV{[RE]|[WV]}{I|L};[QA]Y{I|L}V[RD]{I|L}{I|L};[QA]{I|L}YVV{[RE]|[WV]}{I|L};[QA]{I|L}YV[RD]{I|L}{I|L};[KP]SYV[W{I|L}]VV;[KP]SYVV[W{I|L}]V 4.0117;3.7354;3.5738;3.2975;2.9893;2.8747;2.7131;2.5984;2.0779;1.64 -;-;-;-;-;-;-;-;-;- 263 + 1 1.221 45873.5 1.0 10267 5627 15895 HBL1_DMSO_200M_050219_1,15896 HBL1_DMSO_200M_050219_1,15896,QAIERYLVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15897 77.441 27.0 2093300.0 25 0 162010.0 + + 39825 SVIDIINGEAT 11 93 566.322423852966 1130.630294772732 2 566.3221313357353 MULTI CID FTMS 0 0 0 15895 955359.1875 0.4119442581630507 8 -0.5573272705078125 2 Unmodified _VEVSLQRTVT_ ENSG00000168090|ENST00000303904|COPS6 19.256988751693697 0.5244284437930726 3 [VS]{I|L}D{I|L} 5 -1 31.132 0.0 0.0 2.7535 0.0 0.0 0.0 600.3156334780632 600.3156334780632 15.730684275811209 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.7742275032520141 0.0 [VS]{I|L}D{I|L} 2.7535 - 124 1 1.221 48752.9 1.0 10268 5627 15895 HBL1_DMSO_200M_050219_1,15897 HBL1_DMSO_200M_050219_1,15897,VEVSLQRTVT False False SVIDIINGEAT 77.441242 566.322131335735 44616816.0 15895.0 ENSG00000168090|ENST00000303904|COPS6 3.317293167114258 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15898 77.442 24.0 2120200.0 25 0 168360.0 + 35740 SVIDIINGEAT 11 90 566.2980499999364 1130.5815470666728 2 566.2988769412041 MULTI CID FTMS 0 0 0 15895 1083359.875 0.7948096107735393 -3 0.1204833984375 3 Unmodified _SVIDIINGEAT_ ENSG00000168090|ENST00000303904|COPS6 21.53697664764585 0.586507868110548 3 [VS]{NN|[MP]|[D{I|L}]|[EV]}{I|L} 5 6 22.76 0.0 0.0 2.0131 0.0 0.0 0.0 600.2635288384103 600.2635288384103 7.393032336038079 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 + [VS]{NN|[MP]|[D{I|L}]|[EV]}{I|L} 2.0131 + + 60 1 1.221 45052.4 1.0 10269 5627 15895 HBL1_DMSO_200M_050219_1,15898 HBL1_DMSO_200M_050219_1,15898,SVIDIINGEAT False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15899 77.444 51.0 751240.0 25 0 163980.0 + 24359 KIMDATNILV 10 62 559.3191911814267 1116.6238294296534 2 559.3185912966728 MULTI CID FTMS 0 0 0 15895 673136.0625 1.0 0 0.0 4 Unmodified _MEQEKKLLV_ ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3 19.256988751693697 0.3154191944385105 3 N{I|L}{I|L}V 4 6 26.682 0.0 0.0 2.3896 0.0 0.0 659.3351917951187 0.0 659.3351917951187 0.0 13.58349385648225 0.0 0.0 0 0.6237125054200234 0.0 0.0 0.4247425010840047 N{I|L}{I|L}V 2.3896 - 24 1 1.221 37458.6 1.0 10270 5627 15895 HBL1_DMSO_200M_050219_1,15899 HBL1_DMSO_200M_050219_1,15899,MEQEKKLLV False False KIMDATNILV 77.443771 559.318591296673 8114921.0 15895.0 ENSG00000168610|ENST00000264657|STAT3;;nc|ENSG00000168610|P40763-2|STAT3;;nc|ENSG00000168610|P40763-3|STAT3 3.893566449483236 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15900 77.446 79.0 1010900.0 25 0 90640.0 -1 0 73 628.3343306157986 627.3270541491986 1 628.3316528201103 MULTI CID FTMS 0 0 0 15895 532857.375 0.0398700185052388 8 -0.5573272705078125 5 3 V{M(Oxidation (M))|F}SY{I|L} 5 -1 + 42.153 0.0 0.0 6.7195 6.7195 86.56 0.0 0.0 0.0 5.965036852608009 5.965036852608009 5.965036852608009 5.965036852608009 0 1.066901560044258 0.0 0.6747425010840047 0.0 V{M(Oxidation (M))|F}SY{I|L};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VY{I|L};[{M(Oxidation (M))|F}V]SY{I|L};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}{I|L}V;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}V;[{M(Oxidation (M))|F}V][Y{I|L}]S;[{M(Oxidation (M))|F}V][YT]V 6.7195;5.7686;5.5315;5.434;5.2629;4.656;4.1885;3.6828;1.7827;1.5835 -;-;-;-;-;-;-;-;-;- 111 + 1 1.221 63677.5 1.0 10271 5627 15895 HBL1_DMSO_200M_050219_1,15900 HBL1_DMSO_200M_050219_1,15900, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15901 77.452 359.0 782490.0 25 0 52056.0 + 32059 RVLEKPESLLL 11 157 648.8976979226226 1295.780842912045 2 648.8979980349541 MULTI CID FTMS 0 0 0 15895 491574.375 0.3809968496947787 4 -0.2005844116210937 6 Unmodified _RVLEKPESLLL_ ENSG00000137221|ENST00000372449|TJAP1;ENST00000454762.1_1_6:43472456-43473590:+|nuORF;nc|ENSG00000137221|Q5JTD0-2|TJAP1;nc|ENSG00000137221|Q5JTD0-4|TJAP1 64.86049521808526 0.0494191392184129 3 [RV]{I|L}EKPES{I|L}{I|L}{I|L} 11 0 + 98.858 0.0 0.0 7.6293 7.6293 83.49 0.0 0.0 0.0 1.804986311316113 15.006061517277004 1.804986311316113 1.804986311316113 0 1.426935982160881 1.0 1.4361818737241734 0.6307196863200843 + + [RV]{I|L}EKPES{I|L}{I|L}{I|L};[EP]S{I|L}K{I|L}RD{I|L}{I|L}{I|L};[EP]S{I|L}{I|L}KRD{I|L}{I|L}{I|L};[RV]{I|L}EKPE{I|L}S{I|L}{I|L};[RV]{I|L}EKPTD{I|L}{I|L}{I|L};[RV]{I|L}EKS[EP]{I|L}{I|L}{I|L};{I|L}{I|L}[RD]KPES{I|L}{I|L}{I|L};[RV]{I|L}EG{I|L}[PS]S{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}R[VG]PES{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}[VG]RPES{I|L}{I|L}{I|L} 7.6293;7.49;7.1819;7.1184;6.7777;6.4844;6.4498;6.4282;6.2614;6.2614 +;-;-;-;-;-;-;-;-;- + 11947 1 1.221 205809.6 1.0 10272 5627 15895 HBL1_DMSO_200M_050219_1,15901 HBL1_DMSO_200M_050219_1,15901,RVLEKPESLLL True True RVLEKPESLLL 77.452071 648.897998034954 68806125.0 15895.0 nc|ENSG00000137221|Q5JTD0-4|TJAP1;;ENSG00000137221|ENST00000372449|TJAP1;;nc|ENSG00000137221|Q5JTD0-2|TJAP1;;ENST00000454762.1_1_6:43472456-43473590:+|nuORF 4.777775128682454 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15902 77.459 410.0 331650.0 25 0 64065.0 -1 0 86 1097.7977953078648 3290.3715565237944 3 1098.133105456829 MULTI CID FTMS 0 0 0 15895 439053.96875 0.6861137546944767 2 -0.1041793823242187 7 3 TVN 3 -1 19.213 0.0 0.0 0.58392 0.0 0.0 2481.925589265624 491.2629011870951 2973.1884904527183 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.2302046884880935 TVN 0.58392 - 209 + 1 1.221 112226.9 1.0 10273 5627 15895 HBL1_DMSO_200M_050219_1,15902 HBL1_DMSO_200M_050219_1,15902, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15903 77.467 421.0 1068500.0 25 0 55006.0 29685 QPDLLASLKYQ 11 186 638.3510118620434 0 638.3516113162041 PEAK CID FTMS 0 0 0 15895 349587.125 0.5758828440492884 -3 0.1204833984375 8 Unmodified _QPDLLASLKYQ_ ENST00000560197.5_1_15:39160624-39178953:-|nuORF 9.5439744041441 0.4544742665839035 3 EADA{I|L}A 6 8 33.621 0.0 0.0 2.6376 0.0 0.0 508.3094323160804 193.09877954654533 701.4082118626258 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 EADA{I|L}A 2.6376 - 2566 + 1 1.221 320769.6 1.0 10274 5627 15895 HBL1_DMSO_200M_050219_1,15903 HBL1_DMSO_200M_050219_1,15903,QPDLLASLKYQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15904 77.475 445.0 388650.0 25 0 19911.0 + 3604 DAASIAAIV 9 133 830.4626975139649 829.4554210473649 1 830.4615966677666 MULTI CID FTMS 0 0 0 15895 266502.6875 0.2918408180440127 4 -0.2005844116210937 9 Unmodified _DAASIAAIV_ ENSG00000123737|ENST00000243498|EXOSC9;ENST00000508212.5_1_4:122723919-122731001:+|nuORF;ENST00000509980.5_1_4:122722579-122736524:+|nuORF;nc|ENSG00000123737|Q06265-2|EXOSC9;nc|ENSG00000123737|Q06265-3|EXOSC9;nc|ENSG00000123737|Q06265-4|EXOSC9 48.345845343767074 0.0439967357579942 3 [{I|L}P]NDAA{I|L} 7 6 34.606 0.0 0.0 4.1722 0.0 0.0 0.0 132.0678236584828 132.0678236584828 11.912202171919816 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.7931576817365437 0.0 [{I|L}P]NDAA{I|L} 4.1722 - 2548 1 1.221 114874.4 1.0 10275 5627 15895 HBL1_DMSO_200M_050219_1,15904 HBL1_DMSO_200M_050219_1,15904,DAASIAAIV True True DAASIAAIV 77.47489 830.461596667767 6049874.5 15895.0 nc|ENSG00000123737|Q06265-2|EXOSC9;;ENST00000508212.5_1_4:122723919-122731001:+|nuORF;;ENST00000509980.5_1_4:122722579-122736524:+|nuORF;;ENSG00000123737|ENST00000243498|EXOSC9;;nc|ENSG00000123737|Q06265-3|EXOSC9;;nc|ENSG00000123737|Q06265-4|EXOSC9 2.753733396530152 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15905 77.486 625.0 243670.0 25 0 26715.0 + 12391 GTIGGGIFQA 10 157 460.7453212816936 919.4760896301872 2 460.7454711794853 MULTI CID FTMS 0 0 0 15895 266835.40625 0.1757454152043741 6 -0.38446044921875 10 Unmodified _GTIGGGIFQA_ ENSG00000134375|ENST00000367287|TIMM17A;ENST00000478378.5_1_1:201924654-201931951:+|nuORF;ENST00000484647.1_1_1:201924654-201926725:+|nuORF 37.97399986684836 0.1789611706409123 3 GKWA 4 8 21.67 0.0 0.0 2.3568 0.0 0.0 459.2431622393654 0.0 459.2431622393654 0.0 2.8664287801444743 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 GKWA 2.3568 - 907 + 1 1.221 122579.3 1.0 10276 5627 15895 HBL1_DMSO_200M_050219_1,15905 HBL1_DMSO_200M_050219_1,15905,GTIGGGIFQA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15906 77.494 455.0 414030.0 25 0 43254.0 + 37095 TGRKGGGG 8 150 689.3715267845793 688.3642503179792 1 689.3719970583916 MULTI CID FTMS 0 0 0 15895 244931.375 0.5571589104150234 -4 0.1508407592773437 11 Unmodified _TGRKGGGG_ REV__ENSG00000115568|ENST00000411696|ZNF142;REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF;REV__nc|ENSG00000115568|P52746|ZNF142 0.0 0.8243325171867699 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}TEV 6 -1 + 73.734 0.0 0.0 10.711 10.711 91.924 0.0 0.0 0.0 16.85189804171395 11.575221787320515 11.575221787320515 6.131382658072312 0 1.385151878060192 1.5228787452803376 0.9247425010840048 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}TEV;{NN|[MP]|[D{I|L}]|[EV]}T{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}TD{I|L};{NN|[MP]|[D{I|L}]|[EV]}TE{I|L}V;[{I|L}T]D{I|L}EV;{[QN]|[E{I|L}]|[KN]}VTEV;{NN|[MP]|[D{I|L}]|[EV]}T{I|L}D{I|L};[{I|L}T]EVEV;{[TV]|[{I|L}S]}E{I|L}EV;{I|L}{I|L}DTEV 10.711;9.8207;9.0299;8.2976;8.2633;8.1646;8.1392;7.9143;7.537;7.4083 -;-;-;-;-;-;-;-;-;- 611 1 1.221 140127.2 1.0 10277 5627 15895 HBL1_DMSO_200M_050219_1,15906 HBL1_DMSO_200M_050219_1,15906,TGRKGGGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15907 77.502 470.0 400420.0 25 0 73850.0 -1 0 107 866.4766113162041 0 866.4766113162041 PEAK CID FTMS 0 0 0 -1 0 12 3 V{I|L}ADAA 6 -1 36.272 0.0 0.0 2.0955 0.0 0.0 994.5253520001622 193.0987490289672 1187.6241010291294 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8391368308784531 0.0 V{I|L}ADAA 2.0955 - 2633 + 1 1.221 127841.7 1.0 10278 5627 15895 HBL1_DMSO_200M_050219_1,15907 HBL1_DMSO_200M_050219_1,15907, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15908 77.512 501.0 249680.0 25 0 26291.0 + 41820 VPYAGINI 8 126 846.4719760412405 845.4646995746405 1 846.4741088747978 MULTI CID FTMS 0 0 0 15895 164590.328125 0.1684867527695485 7 -0.4447021484375 13 Unmodified _VPYAGINI_ ENSG00000158417|ENST00000289371|EIF5B 90.83580072412532 0.0563165270037559 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVAVN{I|L} 8 4 + 65.17 0.0 0.0 7.7081 7.7081 84.225 0.0 0.0 0.0 3.0355975523757905 11.425391423647175 3.0355975523757905 2.2134030500787816 0 0.5 1.154901959985743 0.3494850021680094 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVAVN{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAAVN{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVG{I|L}N{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AG{I|L}VN{I|L};[VP]YAAVN{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAG{I|L}N{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AGV{I|L}N{I|L};[VP]YAG{I|L}N{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVAVGG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}VN{I|L} 7.7081;7.4463;7.3521;7.3521;7.3491;7.0903;6.996;6.993;6.6126;6.594 -;-;-;-;-;-;-;+;-;- + 2143 1 1.221 88361.7 1.0 10279 5627 15895 HBL1_DMSO_200M_050219_1,15908 HBL1_DMSO_200M_050219_1,15908,VPYAGINI True True VPYAGINI 77.512287 846.474108874798 11710729.0 15895.0 ENSG00000158417|ENST00000289371|EIF5B 6.67816686630249 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15909 77.522 579.0 161100.0 25 0 11092.0 + -1 QLLCPWNIRDF 11 143 731.3699828982353 0 731.3699828982353 PEAK CID FTMS 0 0 0 -1 0 14 Carbamidomethyl (C) _QLLC(Carbamidomethyl (C))PWNIRDF_ REV__ENSG00000166091|ENST00000339180|CMTM5 33.4449034751529 0.1938147417151705 3 {I|L}D[{M(Oxidation (M))|F}T]EMQ{I|L} 8 -1 28.665 0.0 0.0 1.9624 0.0 0.0 241.14093611747012 239.10405908756096 480.2449952050312 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {I|L}D[{M(Oxidation (M))|F}T]EMQ{I|L} 1.9624 - 1131 + 1 1.221 69853.2 1.0 10280 5627 15895 HBL1_DMSO_200M_050219_1,15909 HBL1_DMSO_200M_050219_1,15909,QLLCPWNIRDF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15910 77.533 584.0 185270.0 25 0 9948.8 -1 0 126 994.4471506849866 1986.879748436773 2 994.9514648318292 MULTI CID FTMS 0 0 0 15895 91059.7109375 0.2024005798252675 -9 0.6215286254882812 15 3 [NP]N{I|L}{I|L}R 6 -1 24.2 0.0 0.0 1.218 0.0 0.0 0.0 1276.4339836264794 1276.4339836264794 0.5423595621581221 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7059771852360797 [NP]N{I|L}{I|L}R 1.218 - 1529 1 1.221 75255.2 1.0 10281 5627 15895 HBL1_DMSO_200M_050219_1,15910 HBL1_DMSO_200M_050219_1,15910, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15912 77.537 25.0 1198400.0 25 0 292000.0 + 258 ADAPVALVV 9 57 427.7527245006685 853.4908960681371 2 427.7528564333916 MULTI CID FTMS 0 0 0 15911 1307550.875 0.0862520035082585 -2 0.130126953125 1 Unmodified _ADAPVALVV_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 16.942295170755138 0.3780752226737986 3 [VP]ADAA 6 6 29.654 0.0 0.0 3.4744 0.0 0.0 0.0 326.2076678789371 326.2076678789371 9.47621246364342 0.0 0.0 0.0 0 0.0 1.0 0.4247425010840047 0.0 [VP]ADAA 3.4744 - 51 1 1.231 31219.1 1.0 10282 5628 15911 HBL1_DMSO_200M_050219_1,15912 HBL1_DMSO_200M_050219_1,15912,ADAPVALVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15913 77.54 157.0 711340.0 25 0 65502.0 + 11835 GLPRYALAP 9 127 479.2776343352262 956.5407157372524 2 479.2779724001884 MULTI CID FTMS 0 0 0 15911 522274.8125 0.6724785766278122 3 -0.1037216186523437 2 Unmodified _GLPRYALAP_ REV__ENSG00000177302|ENST00000321105|TOP3A;REV__nc|ENSG00000177302|Q13472-2|TOP3A;REV__nc|ENSG00000177302|Q13472-3|TOP3A 13.50788311687929 0.4710407108020397 3 [{I|L}A]DVA 5 -1 27.28 0.0 0.0 2.852 0.0 0.0 0.0 484.2633164054743 484.2633164054743 16.68422413293614 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}A]DVA 2.852 - 686 1 1.231 90184.4 1.0 10283 5628 15911 HBL1_DMSO_200M_050219_1,15913 HBL1_DMSO_200M_050219_1,15913,GLPRYALAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15915 77.544 30.0 1762400.0 25 0 178820.0 + 33694 SIYYILFLR 9 62 594.342714454846 1186.670875976492 2 594.3430053591728 MULTI CID FTMS 0 0 0 15914 1713372.625 0.5048532943721247 -3 0.1374435424804687 1 Unmodified _SIYYILFLR_ REV__ENSG00000092108|ENST00000458591|SCFD1;REV__ENST00000555259.5_1_14:31112578-31185169:+|nuORF;REV__nc|ENSG00000092108|Q8WVM8-2|SCFD1;REV__nc|ENSG00000092108|Q8WVM8-3|SCFD1 11.640296217721598 0.521594087909532 3 VV{M(Oxidation (M))|F}P 4 -1 41.242 0.0 0.0 3.4755 0.0 0.0 0.0 741.3932589166624 741.3932589166624 29.82222621845901 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 VV{M(Oxidation (M))|F}P 3.4755 - 25 + 1 1.231 46973.9 1.0 10284 5629 15914 HBL1_DMSO_200M_050219_1,15915 HBL1_DMSO_200M_050219_1,15915,SIYYILFLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15916 77.546 64.0 1463900.0 25 0 280440.0 + 16961 KIPQVLVKL 9 91 519.3577717238647 1036.7009905145294 2 519.3583251833916 MULTI CID FTMS 0 0 0 15914 1280015.875 0.6536485616558806 -2 0.1041793823242187 2 Unmodified _KIPQVLVKL_ ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24 47.74868867922204 0.0453060283459952 3 K{I|L}PQV{I|L}VK{I|L} 9 0 + 62.22 0.0 0.0 6.0018 6.0018 87.763 0.0 0.0 0.0 30.009495028792976 10.088422267289126 10.088422267289126 9.208187539523747 0 1.805462187404089 0.6777807052660807 0.0 0.0 + + K{I|L}PQV{I|L}VK{I|L};K{I|L}P[AG]V{I|L}VK{I|L};K{I|L}{I|L}[NP]{I|L}VK{I|L};K{I|L}PQV{I|L}[K{I|L}]V;K{I|L}P[AG]V{I|L}[K{I|L}]V;K{I|L}{I|L}[NP]{I|L}[K{I|L}]V 6.0018;5.1135;5.0642;4.3277;3.4395;3.3901 +;-;-;-;-;- + 242 + 1 1.231 76561.4 1.0 10285 5629 15914 HBL1_DMSO_200M_050219_1,15916 HBL1_DMSO_200M_050219_1,15916,KIPQVLVKL True True KIPQVLVKL 77.5458 519.358325183392 34913260.0 15914.0 nc|ENSG00000008838|O75448-2|MED24;;ENSG00000008838|ENST00000394128|MED24 2.3718063036600747 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15917 77.548 75.0 851540.0 25 0 122530.0 40418 VIGFLLAV 8 67 416.2705509744676 830.5265490157352 2 416.2705566287041 MULTI CID FTMS 0 0 0 15914 946332.1875 0.0724983601663138 9 -0.7494888305664062 3 Unmodified _VIGFLLAV_ ENSG00000167165|ENST00000305139|UGT1A6;ENSG00000241119|ENST00000354728|UGT1A9;ENSG00000241635|ENST00000305208|UGT1A1;ENSG00000242366|ENST00000373450|UGT1A8;ENSG00000242515|ENST00000344644|UGT1A10;ENSG00000244122|ENST00000373426|UGT1A7;ENSG00000244474|ENST00000373409|UGT1A4;ENST00000450233.1_1_2:234678284-234681202:+|nuORF;nc|ENSG00000167165|P19224-2|UGT1A6;nc|ENSG00000288702|P35503|UGT1A3;nc|ENSG00000288705|P35504|UGT1A5 24.20995872069341 0.5349487244130675 3 [{I|L}V]PK{I|L}YV 7 4 + 44.23 0.0 0.0 5.3256 5.3256 89.533 0.0 0.0 0.0 18.824091325304835 11.38190082242268 11.38190082242268 44.23016644771252 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK{I|L}YV 5.3256 - 81 + 1 1.231 58704.2 1.0 10286 5629 15914 HBL1_DMSO_200M_050219_1,15917 HBL1_DMSO_200M_050219_1,15917,VIGFLLAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15918 77.55 107.0 383430.0 25 0 32151.0 9345 FILMTWTVLK 10 72 626.3609505499721 1250.7073481667442 2 626.3619262576103 MULTI CID FTMS 0 0 0 15914 851281.875 0.2676068076622744 -5 0.2246627807617187 4 Unmodified _FILMTWTVLK_ L1MC3_dup7320|chrX:70161794-70162664:+|1.112392509996284|0.2551508396873335|2.12|48.0|58|3|anti-sense 6.723162845929126 0.6955379296933136 3 N 1 10 1.7827 0.0 0.0 0.14254 0.0 0.0 1050.6271459956488 83.01463495426015 1133.641780949909 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.14254 - 14 + 1 1.231 37082.8 1.0 10287 5629 15914 HBL1_DMSO_200M_050219_1,15918 HBL1_DMSO_200M_050219_1,15918,FILMTWTVLK False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 15919 77.552 89.0 811070.0 25 0 105530.0 + + 41672 VPPKISLL 8 78 433.78907148450696 865.563590035814 2 433.7891723513603 MULTI CID FTMS 0 0 0 15914 773126.0 0.6769263097987283 -2 0.1041793823242187 5 Unmodified _VPQVVVLL_ ENSG00000116133|ENST00000371269|DHCR24;nc|ENSG00000116133|Q15392-2|DHCR24 26.34127834903884 0.4900704351052977 3 VP 2 -1 45.217 0.0 0.0 5.2239 0.0 0.0 0.0 666.4219726472338 666.4219726472338 14.881747095347537 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VP 5.2239 + + 132 + 1 1.231 62397.4 1.0 10288 5629 15914 HBL1_DMSO_200M_050219_1,15919 HBL1_DMSO_200M_050219_1,15919,VPQVVVLL False False VPPKISLL 77.551814 433.78917235136 20589074.0 15914.0 ENSG00000116133|ENST00000371269|DHCR24;;nc|ENSG00000116133|Q15392-2|DHCR24 0.2185398737589518 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15920 77.554 96.0 1093400.0 25 0 163160.0 + 14679 IIRNLMYVPT 10 112 610.3484104945563 1218.6822680559126 2 610.3478881716728 MULTI CID FTMS 0 0 0 15914 744347.875 0.2731141411960294 -5 0.2246627807617187 6 Unmodified _IIRNLMYVPT_ REV__ENSG00000213462|ENST00000394323|ERV3-1 13.042465956692816 0.6287021003332052 3 {I|L}{I|L}V 3 -1 10.458 0.0 0.0 0.85811 0.0 0.0 0.0 890.4233492486936 890.4233492486936 1.6851382446775016 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}V 0.85811 - 9 + 1 1.231 79984.3 1.0 10289 5629 15914 HBL1_DMSO_200M_050219_1,15920 HBL1_DMSO_200M_050219_1,15920,IIRNLMYVPT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15921 77.555 41.0 957350.0 25 0 128070.0 + 14167 IDDKGILFV 9 68 510.2930836202504 1018.5716143073008 2 510.2946349978447 MULTI CID FTMS 0 0 0 15914 751551.625 0.3244201442221514 -2 0.1041793823242187 7 Unmodified _IDDKGILFV_ ENSG00000165181|ENST00000682961|SHOC1;nc|ENSG00000165181|Q5VXU9-2|SHOC1;nc|ENSG00000165181|Q5VXU9-3|SHOC1;nc|ENSG00000165181|Q5VXU9|SHOC1 21.74664581756881 0.2544899275067181 3 {I|L}T[KT]{M(Oxidation (M))|F}V 6 5 19.398 0.0 0.0 1.9044 0.0 0.0 311.1489735334 0.0 311.1489735334 0.0 6.29879372956886 0.0 0.0 0 0.6989700043360187 0.0 0.4247425010840047 0.0 {I|L}T[KT]{M(Oxidation (M))|F}V 1.9044 - 53 1 1.231 35935.1 1.0 10290 5629 15914 HBL1_DMSO_200M_050219_1,15921 HBL1_DMSO_200M_050219_1,15921,IDDKGILFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15922 77.558 139.0 389720.0 25 0 75234.0 35169 SRSKRRHRTV 10 73 641.8822122364909 1281.7498715397817 2 641.8832275271416 MULTI CID FTMS 0 0 0 15914 600492.1875 0.3495053823365073 -2 0.1041793823242187 8 Unmodified _SRSKRRHRTV_ ENSG00000173578|ENST00000309285|XCR1 3.2813086475875832 0.7114585191678878 3 C(Carbamidomethyl (C)) 1 10 1.5938 0.0 0.0 0.12435 0.0 0.0 989.6450569419286 129.05611597232658 1118.7011729142553 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.12435 - 8 + 1 1.231 48944.9 1.0 10291 5629 15914 HBL1_DMSO_200M_050219_1,15922 HBL1_DMSO_200M_050219_1,15922,SRSKRRHRTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15923 77.562 236.0 1069900.0 25 0 104970.0 + 27747 PLNPQVLL 8 143 447.2760754538383 892.5375979744765 2 447.2761108279228 MULTI CID FTMS 0 0 0 15914 448575.09375 0.5588618304504259 4 -0.2802810668945312 9 Unmodified _PLNPQVLL_ REV__ENSG00000167080|ENST00000393354|B4GALNT2;REV__nc|ENSG00000167080|Q8NHY0-3|B4GALNT2;REV__nc|ENSG00000167080|Q8NHY0|B4GALNT2 49.66892048692302 0.1408045912742846 3 [{I|L}P]NPN{I|L}{I|L}{I|L} 8 -1 + 46.353 0.0 0.0 5.1934 5.1934 77.986 0.0 0.0 0.0 10.49218022670182 13.399480616943508 10.49218022670182 3.0102999566398125 0 0.8807196863200843 1.3010299956639813 0.0 0.5941876774005248 [{I|L}P]NPN{I|L}{I|L}{I|L};[{I|L}P]NPVQ{I|L}{I|L};[{I|L}P]NNP{I|L}{I|L}{I|L};[{I|L}P]GGPN{I|L}{I|L}{I|L};[{I|L}P]NPGG{I|L}{I|L}{I|L};[NP]P{I|L}N{I|L}{I|L}{I|L};[{I|L}P]NN{I|L}P{I|L}{I|L};[AG]VPPN{I|L}{I|L}{I|L};[{I|L}P]GGPVQ{I|L}{I|L};[{I|L}P]NPV[AG]{I|L}{I|L} 5.1934;4.8561;4.7811;4.1557;4.1557;4.0179;3.9093;3.8581;3.8184;3.8184 -;-;-;-;-;-;-;-;-;- 1174 1 1.231 197094.6 1.0 10292 5629 15914 HBL1_DMSO_200M_050219_1,15923 HBL1_DMSO_200M_050219_1,15923,PLNPQVLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15924 77.57 456.0 234740.0 25 0 22676.0 + 38780 TVDLRLQPTRK 11 176 663.8946746631615 1325.7747963931229 2 663.8947021365166 MULTI CID FTMS 0 0 0 15914 291351.03125 0.6663099237818528 -2 0.1041793823242187 10 Unmodified _TVDLRLQPTRK_ REV__ENSG00000185261|ENST00000682413|KIAA0825;REV__ENST00000504117.1_1_5:93752768-93812878:-|nuORF;REV__nc|ENSG00000185261|Q8IV33-3|KIAA0825;REV__nc|ENSG00000185261|Q8IV33|KIAA0825 6.630372943996041 0.8438654038452725 3 {[TV]|[{I|L}S]}D{I|L}[NP]H{I|L}V 9 -1 35.155 0.0 0.0 2.6517 0.0 0.0 0.0 334.21770345782915 334.21770345782915 24.3174892239232 0.0 0.0 0.0 0 0.9247425010840048 1.0 0.0 0.0 {[TV]|[{I|L}S]}D{I|L}[NP]H{I|L}V 2.6517 - 1091 1 1.231 88979.5 1.0 10293 5629 15914 HBL1_DMSO_200M_050219_1,15924 HBL1_DMSO_200M_050219_1,15924,TVDLRLQPTRK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15925 77.581 595.0 219320.0 25 0 16975.0 + 17829 KQLDDLKVEL 10 157 600.8454667729441 0 600.8470947146416 PEAK CID FTMS 0 0 0 15914 135563.625 0.5164139834413195 4 -0.2802810668945312 11 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 135.71846124360977 4.384730437392425e-13 3 EVK{I|L}DD{I|L}Q 8 7 73.296 0.0 0.0 6.1097 0.0 0.0 131.0964738248138 125.07247339420157 256.16894721901537 0.0 0.0 0.0 0.0 0 2.392642683904553 0.0 0.6747425010840047 1.1298545532927078 EVK{I|L}DD{I|L}Q 6.1097 - 3404 + 1 1.231 101148.6 1.0 10294 5629 15914 HBL1_DMSO_200M_050219_1,15925 HBL1_DMSO_200M_050219_1,15925,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15926 77.591 565.0 70575.0 25 0 5529.8 + -1 ERKMEWWKKMW 11 88 835.4034301638603 0 835.4034301638603 PEAK CID FTMS 0 0 0 -1 0 12 2 Oxidation (M) _ERKM(Oxidation (M))EWWKKM(Oxidation (M))W_ REV__ENSG00000130234|ENST00000252519|ACE2;REV__nc|ENSG00000130234|Q9BYF1-3|ACE2 0.0 0.4761840153648598 3 W{I|L}AVA 5 -1 15.406 0.0 0.0 0.92319 0.0 0.0 932.3779530017456 193.0983828180297 1125.4763358197754 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W{I|L}AVA 0.92319 - 429 + 1 1.231 33496.7 1.0 10295 5629 15914 HBL1_DMSO_200M_050219_1,15926 HBL1_DMSO_200M_050219_1,15926,ERKMEWWKKMW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15928 77.595 1.5 42638000.0 25 0 8866700.0 + 15640 IQIMKVEEI 9 71 551.8120308825914 1101.6095088319828 2 551.8128539919853 MULTI CID FTMS 0 0 0 15927 43835240.0 0.7814654767610357 -1 0.0507736206054687 1 Unmodified _IQIMKVEEI_ ENSG00000105640|ENST00000222247|RPL18A;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 45.69961567697781 0.0497987121815769 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}VEE{I|L}Q{I|L} 9 5 + 51.367 0.0 0.0 4.6629 4.6629 73.174 0.0 0.0 0.0 1.1932554326627098 0.6167428452730661 0.6167428452730661 1.1932554326627098 0 0.3252574989159953 0.0 0.7302046884880937 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}VEE{I|L}Q{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KVEE{I|L}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}D{I|L}E{I|L}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{I|L}EE{I|L}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}VEE{I|L}[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KVEE{I|L}[AG]{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}DE{I|L}{I|L}Q{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KD{I|L}E{I|L}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VE{I|L}E{I|L}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}D{I|L}E{I|L}[AG]{I|L} 4.6629;4.5546;4.1164;4.1164;3.827;3.7187;3.6393;3.6225;3.5698;3.2805 -;-;-;-;-;-;-;-;-;- 461 1 1.231 49873.9 1.0 10296 5630 15927 HBL1_DMSO_200M_050219_1,15928 HBL1_DMSO_200M_050219_1,15928,IQIMKVEEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15929 77.596 3.3 15223000.0 25 0 1828800.0 + 3949 DALLKFSHI 9 68 522.2978129180204 1042.5810729028408 2 522.2982665896416 MULTI CID FTMS 0 0 0 15927 14542954.0 0.7629562905402144 3 -0.2295074462890625 2 Unmodified _DALLKFSHI_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 49.55428908609986 0.0413471690215031 3 {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L} 9 0 + 85.253 0.0 0.0 8.1771 8.1771 98.063 0.0 0.0 0.0 62.85345414336878 10.243371891081424 10.243371891081424 85.25308848738743 0 1.8494850021680087 1.5228787452803376 0.805462187404089 0.0 + + {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L} 8.1771 + + 224 + 1 1.231 43826.5 1.0 10297 5630 15927 HBL1_DMSO_200M_050219_1,15929 HBL1_DMSO_200M_050219_1,15929,DALLKFSHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15930 77.597 18.0 3392500.0 25 0 760630.0 + 32247 RWPDYVREL 9 49 617.3225132351072 1232.6304735370145 2 617.3228637576103 MULTI CID FTMS 0 0 0 15927 3751452.75 0.7136227573102313 14 -1.2213973999023438 3 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 32.037481411007896 0.1235546156350648 3 [WR][DP]Y[RV]E{I|L} 9 0 + 43.067 0.0 0.0 3.4939 3.4939 83.918 0.0 0.0 0.0 1.0726401871822588 26.60151216962361 1.0726401871822588 43.067424676627226 0 1.0 1.6989700043360187 0.0 0.4247425010840047 + + [WR][DP]Y[RV]E{I|L} 3.4939 + + 60 1 1.231 53701.6 1.0 10298 5630 15927 HBL1_DMSO_200M_050219_1,15930 HBL1_DMSO_200M_050219_1,15930,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15931 77.599 53.0 852580.0 25 0 108990.0 + 36549 TAKPKHKVL 9 77 511.3274884988596 1020.6404240645192 2 511.3278076052666 MULTI CID FTMS 0 0 0 15927 2204077.25 1.0 0 0.0 4 Unmodified _TAKPKHKVL_ REV__CON__P02768-1;REV__ENSG00000163631|ENST00000295897|ALB;REV__nc|ENSG00000163631|P02768-2|ALB;REV__nc|ENSG00000163631|P02768-3|ALB 8.593279151180031 0.6146971463335029 3 V[NG]P[NP]PV 8 -1 21.375 0.0 0.0 2.0943 0.0 0.0 228.22912142955664 0.0 228.22912142955664 0.0 9.156687756324686 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 V[NG]P[NP]PV 2.0943 - 112 + 1 1.231 39420.8 1.0 10299 5630 15927 HBL1_DMSO_200M_050219_1,15931 HBL1_DMSO_200M_050219_1,15931,TAKPKHKVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15932 77.6 19.0 2883900.0 25 0 248120.0 + -1 SLEKRCSL 8 87 496.7623068136208 991.5100606940416 2 496.7618286013603 MULTI CID FTMS 0 0 0 15927 2023813.625 0.2414154960793805 5 -0.402374267578125 5 Carbamidomethyl (C) _SLEKRC(Carbamidomethyl (C))SL_ REV__ENSG00000143147|ENST00000682931|GPR161;REV__ENST00000493800.1_1_1:168059784-168074118:-|nuORF;REV__nc|ENSG00000143147|Q8N6U8-2|GPR161;REV__nc|ENSG00000143147|Q8N6U8-6|GPR161 14.581692164780916 0.6954967302934248 3 P{I|L}KG{I|L} 5 -1 20.177 0.0 0.0 2.035 0.0 0.0 465.1611764488212 0.0 465.1611764488212 0.0 6.360374210097454 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}KG{I|L} 2.035 - 163 + 1 1.231 51858.5 1.0 10300 5630 15927 HBL1_DMSO_200M_050219_1,15932 HBL1_DMSO_200M_050219_1,15932,SLEKRCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15933 77.601 37.0 1506600.0 25 0 264750.0 + 2497 AQYKRILI 8 89 502.8141525321576 1003.6137521311152 2 502.8141967654228 MULTI CID FTMS 0 0 0 15927 1934265.25 0.3493394119206111 7 -0.5799713134765625 6 Unmodified _AQYKRILI_ REV__ENSG00000167861|ENST00000425042|HID1;REV__ENST00000532395.5_1_17:72947667-72950470:-|nuORF;REV__nc|ENSG00000167861|Q8IV36-2|HID1;REV__nc|ENSG00000167861|Q8IV36-3|HID1 5.760428011301431 0.7893668129297577 3 {I|L} 1 -1 11.99 0.0 0.0 1.1947 0.0 0.0 872.518916781309 0.0 872.518916781309 0.0 2.657394585211277 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1947 + + 15 + 1 1.231 52073.9 1.0 10301 5630 15927 HBL1_DMSO_200M_050219_1,15933 HBL1_DMSO_200M_050219_1,15933,AQYKRILI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15934 77.602 38.0 2093900.0 25 0 191130.0 + 32257 RWPDYVREL 9 75 411.88404851646834 1232.630316149605 3 411.8841125369072 MULTI CID FTMS 0 0 0 15927 1704891.125 0.6405344934823801 14 -1.2213973999023438 7 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 41.95555342248728 0.0647214845423414 3 [{M(Oxidation (M))|F}V]G{I|L}VYD 7 8 38.519 0.0 0.0 3.1249 0.0 0.0 0.0 436.2091485072801 436.2091485072801 8.01670877915246 0.0 0.0 0.0 0 0.9247425010840048 0.958607314841775 0.0 0.0 [{M(Oxidation (M))|F}V]G{I|L}VYD 3.1249 - 163 1 1.231 69157.5 1.0 10302 5630 15927 HBL1_DMSO_200M_050219_1,15934 HBL1_DMSO_200M_050219_1,15934,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15935 77.604 43.0 821250.0 25 0 81603.0 + -1 PTLGTVMLTTT 11 74 575.8032771838244 1149.5920014344488 2 575.8032104372978 MULTI CID FTMS 0 0 0 15927 1277100.875 1.0 0 0.0 8 Oxidation (M) _PTLGTVM(Oxidation (M))LTTT_ REV__ENSG00000172534|ENST00000310441|HCFC1;REV__nc|ENSG00000172534|P51610-2|HCFC1;REV__nc|ENSG00000172534|P51610-4|HCFC1 8.745405648335112 0.8338865417133445 3 VT 2 -1 16.454 0.0 0.0 1.4313 0.0 0.0 581.2690777057363 365.1827486627563 946.4518263684928 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 VT 1.4313 - 33 + 1 1.231 34568.1 1.0 10303 5630 15927 HBL1_DMSO_200M_050219_1,15935 HBL1_DMSO_200M_050219_1,15935,PTLGTVMLTTT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15936 77.607 202.0 144260.0 25 0 11954.0 7614 EIREKLRSRL 10 72 650.3958756015004 1298.7771982698007 2 650.3964721560478 MULTI CID FTMS 0 0 0 15927 1269801.625 0.7314895764092897 -1 0.0507736206054687 9 Unmodified _EIREKLRSRL_ ENST00000510479.5_1_5:176948978-176959043:-|nuORF;nc|ENSG00000146067|Q96PV7|FAM193B 3.944395688203298 0.708391353636983 3 {I|L} 1 9 12.474 0.0 0.0 0.96046 0.0 0.0 1167.6821798145256 0.0 1167.6821798145256 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.96046 + + 16 + 1 1.231 33671.7 1.0 10304 5630 15927 HBL1_DMSO_200M_050219_1,15936 HBL1_DMSO_200M_050219_1,15936,EIREKLRSRL False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 15937 77.611 206.0 143440.0 25 0 10945.0 + 40435 VIKEEKLPKN 10 73 599.3613783930778 1196.7082038529554 2 599.3617431521416 MULTI CID FTMS 0 0 0 15927 1240651.75 1.0 0 0.0 10 Unmodified _VIKEEKLPKN_ REV__ENSG00000171843|ENST00000380338|MLLT3;REV__ENST00000475957.1_1_9:20363472-20620706:-|nuORF;REV__nc|ENSG00000171843|P42568-2|MLLT3 6.2057823575117 0.6979311171683138 3 [{I|L}V]N 3 -1 21.171 0.0 0.0 1.7691 0.0 0.0 0.0 867.4908325973491 867.4908325973491 11.63802084926158 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}V]N 1.7691 - 22 1 1.231 27800.6 1.0 10305 5630 15927 HBL1_DMSO_200M_050219_1,15937 HBL1_DMSO_200M_050219_1,15937,VIKEEKLPKN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15938 77.613 101.0 1894600.0 25 0 225020.0 + -1 VEGAGMSLL 9 101 446.7259947997176 891.4374366662352 2 446.7262756228447 MULTI CID FTMS 0 0 0 15927 1232137.25 0.3870089262051947 3 -0.2295074462890625 11 Oxidation (M) _VEGAGM(Oxidation (M))SLL_ REV__ENSG00000140157|ENST00000337451|NIPA2 16.942295170755138 0.3780752226737986 3 ADVAN{I|L} 6 -1 35.58 0.0 0.0 3.9913 0.0 0.0 0.0 305.1244295709594 305.1244295709594 14.610916785000782 0.0 0.0 0.0 0 0.2215141619232908 0.0 0.0 0.0 ADVAN{I|L} 3.9913 - 481 + 1 1.231 150686.7 1.0 10306 5630 15927 HBL1_DMSO_200M_050219_1,15938 HBL1_DMSO_200M_050219_1,15938,VEGAGMSLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15939 77.615 64.0 769780.0 25 0 68085.0 + 4075 DAMRLYYV 8 87 515.7543381201868 1029.4941233071736 2 515.7557250857353 MULTI CID FTMS 0 0 0 15927 1105479.875 0.2464343554247754 8 -0.6987152099609375 12 Unmodified _DAMRLYYV_ ENSG00000105258|ENST00000221859|POLR2I;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;ENST00000589591.5_1_19:36604659-36605638:-|nuORF;ENST00000592962.5_1_19:36604659-36605276:-|nuORF 23.78978130925829 0.5437962211377206 3 {[DA]|[EG]}{[WT]|[RM]}{I|L}YYV 8 0 + 41.353 0.0 0.0 4.0169 4.0169 83.054 0.0 0.0 0.0 8.077053078093215 27.8584345174594 8.077053078093215 13.015384402724592 0 1.2302046884880935 1.0969100130080565 0.0 0.0 + + {[DA]|[EG]}{[WT]|[RM]}{I|L}YYV;{[QG]|[NA]}[C(Carbamidomethyl (C))K]{I|L}YYV;[NP]P[QA]{[QN]|[E{I|L}]|[KN]}YV;[NP]P[HQ][HS]T{I|L} 4.0169;2.7526;1.933;0.01622 +;-;-;- + 159 1 1.231 42677.3 1.0 10307 5630 15927 HBL1_DMSO_200M_050219_1,15939 HBL1_DMSO_200M_050219_1,15939,DAMRLYYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15940 77.617 88.0 516880.0 25 0 52847.0 28825 QACRFQPSL 9 87 525.2638850097591 0 525.2671386599541 PEAK CID FTMS 0 0 0 15927 1026718.8125 1.0 0 0.0 13 Unmodified _QACRFQPSL_ ENSG00000006118|ENST00000453848|TMEM132A;nc|ENSG00000006118|Q24JP5-2|TMEM132A;nc|ENSG00000006118|Q24JP5-3|TMEM132A 12.531546534597751 0.2832320739326029 3 {I|L} 1 8 11.237 0.0 0.0 1.0717 0.0 0.0 736.3332376935431 196.07325159244377 932.4064892859868 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L} 1.0717 + + 36 + 1 1.231 45849.2 1.0 10308 5630 15927 HBL1_DMSO_200M_050219_1,15940 HBL1_DMSO_200M_050219_1,15940,QACRFQPSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15941 77.618 33.0 702780.0 25 0 67428.0 + -1 LMELGRAHH 9 55 540.2743360572978 1078.5341191813957 2 540.2740966677666 MULTI CID FTMS 0 0 0 15927 931361.5625 1.0 0 0.0 14 Oxidation (M) _LM(Oxidation (M))ELGRAHH_ REV__ENSG00000135314|ENST00000257765|KHDC1;REV__nc|ENSG00000135314|Q4VXA5|KHDC1 7.910154910731844 0.6385446671287552 3 [{I|L}T]A 3 -1 25.686 0.0 0.0 2.3816 0.0 0.0 0.0 790.3419859628985 790.3419859628985 -1.136218907515314 0.0 -1.136218907515314 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T]A 2.3816 - 23 1 1.231 26088.9 1.0 10309 5630 15927 HBL1_DMSO_200M_050219_1,15941 HBL1_DMSO_200M_050219_1,15941,LMELGRAHH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15942 77.62 85.0 530760.0 25 0 51413.0 + 15108 GVVDKSLFSNV 11 89 582.3351836576426 1162.655814382085 2 582.3355590701103 MULTI CID FTMS 0 0 0 15927 842107.9375 0.3693990117649691 5 -0.402374267578125 15 Unmodified _IMRWRRFV_ ENST00000446622.5_1_2:216199652-216212358:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC;ENST00000467388.1_1_2:216203501-216211697:+|nuORF;ENSG00000138363|ENST00000236959|ATIC;ENST00000443953.5_1_2:216177073-216214375:+|nuORF 3.944395688203298 0.8003900995685364 3 [VG]VA 4 8 18.672 0.0 0.0 1.606 0.0 0.0 0.0 833.4381074331194 833.4381074331194 6.576695251796298 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VG]VA 1.606 - 227 1 1.231 39798.0 1.0 10310 5630 15927 HBL1_DMSO_200M_050219_1,15942 HBL1_DMSO_200M_050219_1,15942,IMRWRRFV False False GVVDKSLFSNV 77.620107 582.33555907011 4128829.0 15927.0 ENST00000446622.5_1_2:216199652-216212358:+|nuORF;;nc|ENSG00000138363|P31939-2|ATIC;;ENST00000467388.1_1_2:216203501-216211697:+|nuORF;;ENSG00000138363|ENST00000236959|ATIC;;ENST00000443953.5_1_2:216177073-216214375:+|nuORF 5.250131130218506 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15943 77.622 73.0 831070.0 25 0 112540.0 39823 VEVSLGLPAL 10 84 499.3000860949121 996.585619256624 2 499.3005554080009 MULTI CID FTMS 0 0 0 15927 733428.125 0.3605153613764926 -4 0.1882171630859375 16 Unmodified _VEVSLGLPAL_ ENST00000441394.1_1_13:30881052-30881121:-|nuORF 38.61474834105838 0.1721950110283317 3 E{I|L}DPA{I|L} 6 5 49.73 0.0 0.0 4.99 0.0 0.0 340.2483082501969 0.0 340.2483082501969 0.0 38.13608784304506 0.0 0.0 0 1.1861818737241734 0.0 0.4247425010840047 0.0 E{I|L}DPA{I|L} 4.99 - 142 1 1.231 50841.8 1.0 10311 5630 15927 HBL1_DMSO_200M_050219_1,15943 HBL1_DMSO_200M_050219_1,15943,VEVSLGLPAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15944 77.628 347.0 601250.0 25 0 32436.0 + 33384 SGMRDGWV 8 160 454.2092384096185 906.403923886037 2 454.2092773318291 MULTI CID FTMS 0 0 0 15927 732654.5 1.0 0 0.0 17 Unmodified _SGMRDGWV_ REV__ENST00000464829.5_1_9:33462182-33469499:-|nuORF 9.347437153973935 0.7675937258251505 3 [SG]WA{[C(Carbamidomethyl (C))E]|[WC]}VV 8 -1 + 22.841 0.0 0.0 2.52 2.52 75.714 0.0 0.0 0.0 3.8134074685257566 0.4014429721864587 0.4014429721864587 6.989700043360186 0 0.0 0.0 0.4247425010840047 0.0 [SG]WA{[C(Carbamidomethyl (C))E]|[WC]}VV;[SG]AW{[C(Carbamidomethyl (C))E]|[WC]}VV;V{[QC]|[C(Carbamidomethyl (C))A]}A{[C(Carbamidomethyl (C))E]|[WC]}VV;[SG]ADA{[NV]|[RG]}HH;[SG]W[WC(Carbamidomethyl (C))]{I|L}V;[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))M][SG];[SG]W[WC(Carbamidomethyl (C))]V{I|L};[SG]W{[ES]|[DT]|[{I|L}C]}WGV;{[QC]|[C(Carbamidomethyl (C))A]}VA{[C(Carbamidomethyl (C))E]|[WC]}VV;{[DA]|[EG]}[WC(Carbamidomethyl (C))]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 2.52;1.7488;1.6897;1.3173;1.2373;1.2042;1.1304;1.0747;0.99859;0.99734 -;-;-;-;-;-;-;-;-;- 684 + 1 1.231 160844.6 1.0 10312 5630 15927 HBL1_DMSO_200M_050219_1,15944 HBL1_DMSO_200M_050219_1,15944,SGMRDGWV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15945 77.629 47.0 1264700.0 25 0 123940.0 + 920 AFALVSQAY 9 106 485.2553407309341 968.4961285286682 2 485.2566406130791 MULTI CID FTMS 0 0 0 15927 675857.8125 0.8017079170484773 -1 0.0507736206054687 18 Unmodified _AFALVSQAY_ ENSG00000198612|ENST00000354371|COPS8;nc|ENSG00000198612|Q99627-2|COPS8 20.871210003555333 0.2717241269066626 3 [Q{I|L}]{I|L}{M(Oxidation (M))|F}VP 6 8 30.06 0.0 0.0 3.1038 0.0 0.0 0.0 268.0607115166478 268.0607115166478 14.575768311951698 0.0 0.0 0.0 0 0.0 0.6020599913279624 0.0 0.1643943297944484 [Q{I|L}]{I|L}{M(Oxidation (M))|F}VP 3.1038 - 196 1 1.231 52002.8 1.0 10313 5630 15927 HBL1_DMSO_200M_050219_1,15945 HBL1_DMSO_200M_050219_1,15945,AFALVSQAY False True AFALVSQAY 77.629337 485.256640613079 6203210.5 15927.0 ENSG00000198612|ENST00000354371|COPS8;;nc|ENSG00000198612|Q99627-2|COPS8 1.076680918534597 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15946 77.631 53.0 1602500.0 25 0 213890.0 + 4447 DAWRVPLKV 9 112 542.3189059485384 1082.6232589638769 2 542.3191406130791 MULTI CID FTMS 0 0 0 15927 627707.0 0.3227290532279133 -3 0.1549530029296875 19 Unmodified _DAWRVPLKV_ ENSG00000157212|ENST00000404141|PAXIP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;nc|ENSG00000157212|Q6ZW49-2|PAXIP1 40.72490554402381 0.0714771638475563 3 {[DA]|[EG]}[WR]V[{I|L}P]KV 9 0 + 37.813 0.0 0.0 3.4927 3.4927 77.952 0.0 0.0 0.0 7.498774732166002 14.973024840566469 7.498774732166002 7.498774732166002 0 1.325257498915995 1.2218487496163564 0.0 0.0 + + {[DA]|[EG]}[WR]V[{I|L}P]KV;[{I|L}P]K{[C(Carbamidomethyl (C))E]|[WC]}[{I|L}P]KV;{[QN]|[E{I|L}]|[KN]}[QP][RV]DKV;[{I|L}P]K{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}P]RV;[{I|L}P]K[RV]{[DA]|[EG]}WV;[{I|L}P]K[RV]W{[DA]|[EG]}V;{[QN]|[E{I|L}]|[KN]}[QP][RV]SRV;[{I|L}P]K{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[RV][{I|L}P];[VP][RD][RV]DKV;[{I|L}P]K[RV]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}P] 3.4927;2.8001;1.6718;1.319;0.95145;0.95145;0.93188;0.67862;0.51107;0.4737 +;-;-;-;-;-;-;-;-;- + 242 1 1.231 72322.8 1.0 10314 5630 15927 HBL1_DMSO_200M_050219_1,15946 HBL1_DMSO_200M_050219_1,15946,DAWRVPLKV True True DAWRVPLKV 77.630711 542.319140613079 48576844.0 15927.0 nc|ENSG00000157212|Q6ZW49-1|PAXIP1;;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;;ENSG00000157212|ENST00000404141|PAXIP1;;nc|ENSG00000157212|Q6ZW49-2|PAXIP1;;ENST00000457196.5_1_7:154735861-154782774:-|nuORF 5.8431267738342285 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15947 77.636 312.0 145520.0 25 0 8396.7 -1 KARVVCLPVSL 11 95 621.374435221297 1240.7343175093938 2 621.3745605349541 MULTI CID FTMS 0 0 0 15927 622783.8125 0.9331894541456498 -1 0.0507736206054687 20 Carbamidomethyl (C) _KARVVC(Carbamidomethyl (C))LPVSL_ ENSG00000130943|ENST00000253255|PKDREJ 5.296884461304476 0.8501568894076437 3 {I|L} 1 -1 11.109 0.0 0.0 0.89538 0.0 0.0 1109.6393143129078 0.0 1109.6393143129078 0.0 7.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.89538 + + 105 + 1 1.231 40011.1 1.0 10315 5630 15927 HBL1_DMSO_200M_050219_1,15947 HBL1_DMSO_200M_050219_1,15947,KARVVCLPVSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15949 77.641 3.9 22226000.0 25 0 3712100.0 33513 SILARLVL 8 86 442.7998189850632 883.5850850369264 2 442.8000976443291 MULTI CID FTMS 0 0 0 15948 21239034.0 1.0 0 0.0 1 Unmodified _SILARLVL_ AluSg_dup36345|chr22:39033812-39034106:-|1.7183411907320236|0.3290854125150665|2.38|48.0|14|1|anti-sense 42.09456458481378 0.1992492688217789 3 [{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV{I|L} 8 3 + 53.875 0.0 0.0 6.0973 6.0973 79.038 0.0 0.0 0.0 4.436974992327123 41.2113751626007 4.436974992327123 1.7731749024395782 0 0.9247425010840048 1.3979400086720375 0.8252574989159953 0.0 [{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}V{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S{I|L}{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}TV{I|L}{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GKK;[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K[KG] 6.0973;5.8967;4.4256;4.2249;2.4768;2.1361 -;-;-;-;-;- 162 1 1.251 72527.5 1.0 10316 5631 15948 HBL1_DMSO_200M_050219_1,15949 HBL1_DMSO_200M_050219_1,15949,SILARLVL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 15950 77.642 6.2 14496000.0 25 0 1490900.0 + 21933 LPPKVSVFV 9 101 493.30750595992856 984.6004589866571 2 493.3080627322197 MULTI CID FTMS 0 0 0 15948 10243097.0 0.6971993719479523 15 -1.3396682739257812 2 Unmodified _LPPKVSVFV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 29.081581746732265 0.1611639662936252 3 [KP]VSVP{I|L}{M(Oxidation (M))|F}V 9 4 + 43.937 0.0 0.0 4.4624 4.4624 84.018 0.0 0.0 0.0 0.2254687652561671 4.846368802282008 0.2254687652561671 11.588709367037277 0 0.718765315847925 0.0 0.9916440611282626 0.0 [KP]VSVP{I|L}{M(Oxidation (M))|F}V;[KP]VSPV{I|L}{M(Oxidation (M))|F}V;[KP]PVSV{I|L}{M(Oxidation (M))|F}V;[KP]VPSV{I|L}{M(Oxidation (M))|F}V;[KP]VSP{I|L}V{M(Oxidation (M))|F}V;[KP]PVS{I|L}V{M(Oxidation (M))|F}V;[KP]VPS{I|L}V{M(Oxidation (M))|F}V 4.4624;3.2854;3.1066;2.8008;2.1848;2.006;1.7003 -;-;-;-;-;-;- 723 1 1.251 73683.5 1.0 10317 5631 15948 HBL1_DMSO_200M_050219_1,15950 HBL1_DMSO_200M_050219_1,15950,LPPKVSVFV False True LPPKVSVFV 77.641824 493.30806273222 90968032.0 15948.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 0.169789433479309 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 15951 77.643 21.0 920220.0 25 0 85263.0 28534 PTPHVDPTI 9 45 488.7595805755908 975.5046082179816 2 488.7598449587822 MULTI CID FTMS 0 0 0 15948 4369196.0 0.958599003158803 1 -0.073486328125 3 Unmodified _PTPHVDPTI_ ENST00000476089.1_1_2:182321937-182323202:+|nuORF 16.942295170755138 0.3780752226737986 3 PT{I|L} 3 6 18.5 0.0 0.0 1.8964 0.0 0.0 646.3093090009878 0.0 646.3093090009878 0.0 -1.4215905896025305 -1.4215905896025305 0.0 0 0.0 0.0 0.3807196863200844 0.0 + PT{I|L} 1.8964 + + 26 + 1 1.251 22833.4 1.0 10318 5631 15948 HBL1_DMSO_200M_050219_1,15951 HBL1_DMSO_200M_050219_1,15951,PTPHVDPTI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 15952 77.644 30.0 1117100.0 25 0 242500.0 + 3323 AYLKRRLRCS 10 53 633.3689732899979 1264.7233936467958 2 633.3696777224541 MULTI CID FTMS 0 0 0 15948 2308454.75 0.7124949951145219 -5 0.2338485717773437 4 Unmodified _AYLKRRLRCS_ REV__ENST00000355112.7_1_15:91292688-91292883:+|nuORF 1.6526216038709556 0.7189921496796233 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.251 33801.8 1.0 10319 5631 15948 HBL1_DMSO_200M_050219_1,15952 HBL1_DMSO_200M_050219_1,15952,AYLKRRLRCS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15953 77.645 23.0 1624100.0 25 0 308970.0 + 18194 KVAELFEKL 9 69 538.8213446286255 1075.628136324051 2 538.8218871951103 MULTI CID FTMS 0 0 0 15948 1910884.625 0.3602253674671404 -2 0.096405029296875 5 Unmodified _KVAELFEKL_ ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF 29.28111348798908 0.1586252267974456 3 KVT 3 7 46.95 0.0 0.0 4.3649 0.0 0.0 0.0 744.3804415338499 744.3804415338499 14.650509106876155 0.0 0.0 0.0 0 0.7742275032520141 1.3010299956639813 0.0 0.0 KVT 4.3649 - 64 + 1 1.251 33628.9 1.0 10320 5631 15948 HBL1_DMSO_200M_050219_1,15953 HBL1_DMSO_200M_050219_1,15953,KVAELFEKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15954 77.649 167.0 800060.0 25 0 83622.0 + 3952 DALLKFSHI 9 137 348.53418124881125 1042.5807143466338 3 348.5341674685478 MULTI CID FTMS 0 0 0 15948 1834885.625 0.5745492853499978 1 -0.073486328125 6 Unmodified _DALLKFSHI_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 58.6788170122104 0.0268135626297836 3 {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L} 9 0 + 78.343 0.0 0.0 7.5143 7.5143 88.22 0.0 0.0 0.0 17.23628654999466 5.336026106721107 5.336026106721107 5.336026106721107 0 0.3494850021680094 1.6989700043360187 1.1989700043360187 0.3807196863200844 + + {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L};{[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}S{I|L}H;{[DA]|[EG]}{I|L}{I|L}{I|L}[RP][{M(Oxidation (M))|F}V];{I|L}{I|L}[{M(Oxidation (M))|F}E]K[VS][HA];[HS]{M(Oxidation (M))|F}K{I|L}{I|L}AD{I|L};[HS]{M(Oxidation (M))|F}{I|L}K{I|L}AD{I|L};[{I|L}A]{[WN]|[YH]}K{I|L}AD{I|L};[{M(Oxidation (M))|F}V]RR{I|L}CH{I|L};[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}{I|L}AD{I|L};[K{I|L}][{M(Oxidation (M))|F}E]{I|L}[VS][HA] 7.5143;7.0025;3.4967;2.2425;2.22;1.9312;1.3194;0.74832;0.59039;0.35247 +;-;-;-;-;-;-;-;-;- + 490 + 1 1.251 109699.4 1.0 10321 5631 15948 HBL1_DMSO_200M_050219_1,15954 HBL1_DMSO_200M_050219_1,15954,DALLKFSHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15955 77.65 29.0 1475200.0 25 0 139650.0 + 10495 FTVDQIRAI 9 66 531.8007737843036 1061.586994635407 2 531.8019897341728 MULTI CID FTMS 0 0 0 15948 1729473.0 0.1786747550066904 8 -0.7180938720703125 7 Unmodified _FTVDQIRAI_ ENSG00000167658|ENST00000309311|EEF2;ENST00000594885.1_1_19:3984132-3985378:-|nuORF 39.94969957227396 0.0757326808254658 3 {M(Oxidation (M))|F}TVDQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 9 0 + 51.208 0.0 0.0 4.8237 4.8237 83.757 0.0 0.0 0.0 38.44339433590104 5.016894462103991 5.016894462103991 9.208187539523747 0 0.3807196863200844 0.0 0.0 0.4247425010840047 + + {M(Oxidation (M))|F}TVDQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{M(Oxidation (M))|F}TVD[AG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};Y[{I|L}A]DQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};Y[W{I|L}]Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{M(Oxidation (M))|F}[WE]Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{M(Oxidation (M))|F}NE{[TV]|[{I|L}S]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 4.8237;3.9563;3.2659;2.6557;2.3721;2.0151 +;-;-;-;-;- + 69 + 1 1.251 43347.0 1.0 10322 5631 15948 HBL1_DMSO_200M_050219_1,15955 HBL1_DMSO_200M_050219_1,15955,FTVDQIRAI True True FTVDQIRAI 77.649801 531.801989734173 55803020.0 15948.0 ENSG00000167658|ENST00000309311|EEF2;;ENST00000594885.1_1_19:3984132-3985378:-|nuORF 6.177035490671794 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15956 77.652 108.0 1995800.0 25 0 428770.0 + 3810 DAIPGLKI 8 126 413.75554668930965 825.4965404454193 2 413.7552978396416 MULTI CID FTMS 0 0 0 15948 1509197.125 0.9662480005512464 1 -0.073486328125 8 Unmodified _DAIPGLKI_ ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15 34.10243960390752 0.3329570729325616 3 {[DA]|[EG]}{I|L}PG{I|L}K{I|L} 8 0 + 51.169 0.0 0.0 6.1986 6.1986 84.053 0.0 0.0 0.0 21.966744624233883 8.179123487155564 8.179123487155564 4.948500216800937 0 0.805462187404089 1.5228787452803376 0.0 0.2302046884880938 + + {[DA]|[EG]}{I|L}PG{I|L}K{I|L};{[DA]|[EG]}{I|L}{I|L}[PG]K{I|L};{[DA]|[EG]}{I|L}{I|L}[KA]PV;{[DA]|[EG]}{I|L}[KA]{I|L}PV;[VP]AK{I|L}{[CP]|[EA]}V;{[DA]|[EG]}{I|L}[KA][VP]{I|L};[PG]{I|L}K{I|L}{[CP]|[EA]}V;[VP]AN{I|L}{I|L}TV;[PA]VK{I|L}{[CP]|[EA]}V;[PG]{I|L}N{I|L}{I|L}TV 6.1986;5.5991;4.1484;3.3571;3.233;3.2001;2.8335;2.6934;2.5969;2.294 +;-;-;-;-;-;-;-;-;- + 306 + 1 1.251 169660.2 1.0 10323 5631 15948 HBL1_DMSO_200M_050219_1,15956 HBL1_DMSO_200M_050219_1,15956,DAIPGLKI False True DAIPGLKI 77.652076 413.755297839642 8789590.0 15948.0 nc|ENSG00000121749|Q8TC07|TBC1D15;;ENSG00000121749|ENST00000485960|TBC1D15;;nc|ENSG00000121749|Q8TC07-3|TBC1D15 3.9453590710957847 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15957 77.657 253.0 225840.0 25 0 17212.0 + 30181 QVVDAVLPLLN 11 105 590.8482621041803 1179.6819712751603 2 590.8487426638603 MULTI CID FTMS 0 0 0 15948 930680.8125 0.5713180472269448 8 -0.7180938720703125 9 Unmodified _QVVDAVLPLLN_ REV__ENSG00000101407|ENST00000373447|TTI1 5.731851221503515 0.8481046878870278 3 {I|L} 1 -1 10.596 0.0 0.0 0.8982 0.0 0.0 1048.586861267151 0.0 1048.586861267151 0.0 0.414871175323821 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.8982 + + 92 + 1 1.251 48215.6 1.0 10324 5631 15948 HBL1_DMSO_200M_050219_1,15957 HBL1_DMSO_200M_050219_1,15957,QVVDAVLPLLN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15958 77.662 277.0 118300.0 25 0 12496.0 + 27733 PLLTETRRLLR 11 78 684.4286987185478 0 684.4286987185478 PEAK CID FTMS 0 0 0 -1 0 10 Unmodified _PLLTETRRLLR_ REV__ENSG00000182095|ENST00000430969|TNRC18;REV__nc|ENSG00000182095|O15417-2|TNRC18 1.3295316138638542 0.4761840153648598 3 {I|L} 1 -1 3.4949 0.0 0.0 0.25569 0.0 0.0 412.79024804511874 837.9371431940061 1250.727391239125 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.25569 + + 3 + 1 1.251 33499.2 1.0 10325 5631 15948 HBL1_DMSO_200M_050219_1,15958 HBL1_DMSO_200M_050219_1,15958,PLLTETRRLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15959 77.664 66.0 560810.0 25 0 76145.0 + 2563 ASFNDTFVHV 10 69 568.7723329720903 1135.5301130109806 2 568.7722045779228 MULTI CID FTMS 0 0 0 15948 569210.8125 0.0219223862326024 17 -1.5025482177734375 11 Unmodified _ASFNDTFVHV_ ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF 24.020572477871973 0.4289996903560794 3 NDT{M(Oxidation (M))|F}VVH 7 5 34.902 0.0 0.0 3.0736 0.0 0.0 305.1369678163582 0.0 305.1369678163582 0.0 24.06417714735429 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 NDT{M(Oxidation (M))|F}VVH 3.0736 - 66 + 1 1.251 32448.0 1.0 10326 5631 15948 HBL1_DMSO_200M_050219_1,15959 HBL1_DMSO_200M_050219_1,15959,ASFNDTFVHV False True ASFNDTFVHV 77.663503 568.772204577923 1791759744.0 15948.0 ENSG00000164587|ENST00000407193|RPS14;;ENST00000519690.1_1_5:149827146-149827347:-|nuORF 8.842494328816732 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15960 77.666 132.0 525280.0 25 0 102640.0 + 30941 RKLKEEEHLK 10 97 655.3822983569952 1308.7500437807903 2 655.3828002810478 MULTI CID FTMS 0 0 0 15948 558184.4375 0.4113162560850362 6 -0.5343399047851562 12 Unmodified _RKLKEEEHLK_ REV__ENSG00000205726|ENST00000381318|ITSN1;REV__nc|ENSG00000205726|Q15811-10|ITSN1;REV__nc|ENSG00000205726|Q15811-11|ITSN1;REV__nc|ENSG00000205726|Q15811-12|ITSN1;REV__nc|ENSG00000205726|Q15811-13|ITSN1;REV__nc|ENSG00000205726|Q15811-2|ITSN1;REV__nc|ENSG00000205726|Q15811-3|ITSN1;REV__nc|ENSG00000205726|Q15811-4|ITSN1;REV__nc|ENSG00000205726|Q15811-5|ITSN1;REV__nc|ENSG00000205726|Q15811-6|ITSN1;REV__nc|ENSG00000205726|Q15811-7|ITSN1;REV__nc|ENSG00000205726|Q15811-8|ITSN1;REV__nc|ENSG00000205726|Q15811-9|ITSN1 1.4819007175156935 0.719781833666733 3 V 1 -1 10.0 0.0 0.0 0.76409 0.0 0.0 1191.6705435139918 0.0 1191.6705435139918 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.76409 - 35 + 1 1.251 65149.1 1.0 10327 5631 15948 HBL1_DMSO_200M_050219_1,15960 HBL1_DMSO_200M_050219_1,15960,RKLKEEEHLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15961 77.669 125.0 597390.0 25 0 51418.0 + 16201 IVIQQDDEIRL 11 86 671.37177220472 1340.7289914762398 2 671.3726684451103 MULTI CID FTMS 0 0 0 15948 565839.0625 0.5730866384915989 2 -0.1838760375976562 13 Unmodified _IVIQQDDEIRL_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000525455.5_1_11:62530233-62533976:+|nuORF;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 73.1962812333195 0.0231417158388345 3 {I|L}V{I|L}QQDDE{I|L}R{I|L} 11 0 + 122.21 0.0 0.0 9.1154 9.1154 93.762 0.0 0.0 0.0 108.25998751199356 11.188821499629212 11.188821499629212 9.128498242811006 0 1.305462187404089 2.0 0.805462187404089 0.805462187404089 + + {I|L}V{I|L}QQDDE{I|L}R{I|L};{I|L}V{I|L}Q[AG]DDE{I|L}R{I|L};{I|L}V{I|L}[AG]QDDE{I|L}R{I|L};{I|L}V{I|L}[AG][AG]DDE{I|L}R{I|L} 9.1154;8.4345;8.4345;7.7559 +;-;-;- + 164 + 1 1.251 62285.1 1.0 10328 5631 15948 HBL1_DMSO_200M_050219_1,15961 HBL1_DMSO_200M_050219_1,15961,IVIQQDDEIRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15962 77.671 126.0 848130.0 25 0 85016.0 + 36577 TALLKIEGV 9 130 472.2948718881397 942.5751908430794 2 472.2952148318291 MULTI CID FTMS 0 0 0 15948 557148.1875 0.0556166886645203 11 -0.9724960327148438 14 Unmodified _TALLKIEGV_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000329092.12_1_3:197677808-197679492:+|nuORF;ENST00000478069.1_1_4:95290987-95291311:+|nuORF;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 49.93300154707207 0.0405168250806675 3 [TA]{I|L}{I|L}K{[QN]|[E{I|L}]|[KN]}GV 9 0 + 58.439 0.0 0.0 6.1999 6.1999 80.967 0.0 0.0 0.0 11.266734124050544 2.973957110088876 2.973957110088876 2.973957110088876 0 0.9247425010840048 2.0 1.110924374808178 0.0 + + [TA]{I|L}{I|L}K{[QN]|[E{I|L}]|[KN]}GV;[TA]{I|L}{I|L}K[TP]S{I|L};[TA]{I|L}{I|L}K[DV]A{I|L};[TA]{I|L}{I|L}K[TP]TV;[TA]{I|L}VV{I|L}GV[TA];[TA]{I|L}VVG{I|L}V[TA];[TA]VV{I|L}{I|L}GV[TA];{I|L}{I|L}K{I|L}EGV[TA];[TA]{I|L}AA{I|L}{I|L}V[TA];{I|L}{I|L}KE{I|L}GV[TA] 6.1999;5.8844;5.787;5.7201;5.6162;4.9775;4.5221;4.4624;4.3387;4.143 +;-;-;-;-;-;-;-;-;- + 1491 + 1 1.251 88923.5 1.0 10329 5631 15948 HBL1_DMSO_200M_050219_1,15962 HBL1_DMSO_200M_050219_1,15962,TALLKIEGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15963 77.676 223.0 799660.0 25 0 142140.0 -1 0 133 366.7198939895597 731.4252350459193 2 366.7197753787041 MULTI CID FTMS 0 0 0 15948 475496.28125 0.3641272025728028 -2 0.096405029296875 15 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KM 6 -1 + 58.99 0.0 0.0 8.065 8.065 85.58 0.0 0.0 0.0 26.478174818886373 2.730012720637376 2.730012720637376 2.730012720637376 0 0.6109243748081782 2.0 0.0 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KM;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}MK;{NN|[MP]|[D{I|L}]|[EV]}{I|L}M{I|L}K;{NN|[MP]|[D{I|L}]|[EV]}M{I|L}{I|L}K 8.065;7.6918;5.9793;4.198 -;-;-;- 79 + 1 1.251 142559.4 1.0 10330 5631 15948 HBL1_DMSO_200M_050219_1,15963 HBL1_DMSO_200M_050219_1,15963, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15964 77.682 354.0 126780.0 25 0 7793.5 19245 LEIQKLQRVVR 11 108 691.4352905154228 0 691.4352905154228 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _LEIQKLQRVVR_ ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43-13|PDE4DIP;nc|ENSG00000178104|Q5VU43-2|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;nc|ENSG00000178104|Q5VU43-6|PDE4DIP;nc|ENSG00000178104|Q5VU43-7|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP 1.3295316138638542 0.4761840153648598 3 MG{I|L} 3 10 10.177 0.0 0.0 0.73703 0.0 0.0 689.5275691388687 387.1654757135376 1076.6930448524065 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MG{I|L} 0.73703 - 39 + 1 1.251 38253.0 1.0 10331 5631 15948 HBL1_DMSO_200M_050219_1,15964 HBL1_DMSO_200M_050219_1,15964,LEIQKLQRVVR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15965 77.689 416.0 327660.0 25 0 43691.0 + -1 ACQPECGMTV 10 190 548.2148608726525 1094.4151688121049 2 548.2152587771416 MULTI CID FTMS 0 0 0 15948 404830.03125 0.509591060852309 6 -0.5343399047851562 17 Carbamidomethyl (C) _AC(Carbamidomethyl (C))QPECGMTV_ REV__ENSG00000117983|ENST00000529681|MUC5B;REV__ENSG00000117983|ENST00000529681|MUC5B 10.073929032068715 0.6785112666868882 3 HTV 3 -1 16.572 0.0 0.0 1.5142 0.0 0.0 739.2278652005799 0.0 739.2278652005799 0.0 1.238227155935096 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 HTV 1.5142 - 892 + 1 1.251 107872.0 1.0 10332 5631 15948 HBL1_DMSO_200M_050219_1,15965 HBL1_DMSO_200M_050219_1,15965,ACQPECGMTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15966 77.692 142.0 634890.0 25 0 59495.0 + 19792 AVPEKLQPLL 10 131 554.3413935467609 1106.6682341603216 2 554.3417236208916 MULTI CID FTMS 0 0 0 15948 373705.46875 0.7060695920403486 6 -0.5343399047851562 18 Unmodified _LGSLQPLPLGL_ ENSG00000179933|ENST00000319074|C14orf119 18.373094154950223 0.6529654022026722 3 {[VA]|[{I|L}G]}PS{I|L}Q{I|L}P 8 5 31.921 0.0 0.0 2.8844 0.0 0.0 0.0 298.1738027167742 298.1738027167742 19.70245420087004 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.2742275032520141 0.3054621874040891 {[VA]|[{I|L}G]}PS{I|L}Q{I|L}P 2.8844 - 973 1 1.251 78838.6 1.0 10333 5631 15948 HBL1_DMSO_200M_050219_1,15966 HBL1_DMSO_200M_050219_1,15966,LGSLQPLPLGL False False AVPEKLQPLL 77.692272 554.341723620892 7754086.0 15948.0 ENSG00000179933|ENST00000319074|C14orf119 4.510973612467448 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15967 77.701 485.0 555920.0 25 0 45486.0 + 41543 VPPAKILIV 9 220 475.3256364141294 948.6367198950588 2 475.3259765505791 MULTI CID FTMS 0 0 0 15948 383124.46875 1.0 0 0.0 19 Unmodified _VPPAKILIV_ ENSG00000112992|ENST00000344920|NNT 28.486842064014134 0.1687311288560894 3 VT{I|L}{I|L}{I|L}{I|L}QV 8 5 55.1 0.0 0.0 5.8083 0.0 0.0 0.0 66.03573023013905 66.03573023013905 40.12701315423925 0.0 0.0 0.0 0 0.2984550065040282 1.0969100130080565 0.0 0.0 VT{I|L}{I|L}{I|L}{I|L}QV 5.8083 - 913 + 1 1.251 203788.1 1.0 10334 5631 15948 HBL1_DMSO_200M_050219_1,15967 HBL1_DMSO_200M_050219_1,15967,VPPAKILIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15968 77.71 445.0 396540.0 25 0 19745.0 + 23758 LVAEEYDQAC 10 190 570.7464979497557 1139.4784429663114 2 570.7456542849541 MULTI CID FTMS 0 0 0 15948 337914.78125 0.895953380777699 8 -0.7180938720703125 20 Unmodified _LVAEEYDQAC_ REV__ENSG00000070061|ENST00000374647|ELP1 14.838274106304384 0.5985701837916485 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PWPE 8 -1 40.583 0.0 0.0 3.5616 0.0 0.0 0.0 109.98187164165952 109.98187164165952 11.094265795852673 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.9247425010840048 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PWPE 3.5616 - 2226 1 1.251 138492.6 1.0 10335 5631 15948 HBL1_DMSO_200M_050219_1,15968 HBL1_DMSO_200M_050219_1,15968,LVAEEYDQAC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15970 77.714 11.0 4170900.0 25 0 243320.0 + 28855 QAIERYLVV 9 82 545.8166719308654 1089.6187909285306 2 545.8174926638603 MULTI CID FTMS 0 0 0 15969 3739579.5 0.5969463241012014 2 -0.1706314086914062 1 Unmodified _QAIERYLVV_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000470302.5_1_2:230656574-230657731:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 62.57269311338072 0.0246576765497938 3 QA{I|L}YKK 6 5 33.955 0.0 0.0 3.1162 0.0 0.0 0.0 355.16059290103755 355.16059290103755 6.771285581948149 0.0 0.0 0.0 0 0.2887254899964357 1.0 0.0 0.0 QA{I|L}YKK 3.1162 - 57 + 1 1.257 45160.8 1.0 10336 5632 15969 HBL1_DMSO_200M_050219_1,15970 HBL1_DMSO_200M_050219_1,15970,QAIERYLVV True True QAIERYLVV 77.714132 545.81749266386 42370284.0 15969.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12;;ENST00000470302.5_1_2:230656574-230657731:-|nuORF 5.054961204528809 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15971 77.715 46.0 992750.0 25 0 75486.0 + -1 YPTQLFRTV 9 77 561.80329281635 1121.5920326995 2 562.8077880740166 MULTI CID FTMS 0 0 0 15969 884494.5625 0.5212967151327267 7 -0.6446075439453125 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LCTVFRTLQ_ nc|ENSG00000120690|P32519-2|ELF1;ENSG00000120690|ENST00000239882|ELF1 9.38312468134398 0.5871240394367778 3 PTQ{I|L}{M(Oxidation (M))|F}RS{I|L} 8 -1 38.493 0.0 0.0 3.432 0.0 0.0 161.05270997851773 0.0 161.05270997851773 0.0 14.835976320930982 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3807196863200844 PTQ{I|L}{M(Oxidation (M))|F}RS{I|L} 3.432 - 105 + 1 1.257 41624.1 1.0 10337 5632 15969 HBL1_DMSO_200M_050219_1,15971 HBL1_DMSO_200M_050219_1,15971,LCTVFRTLQ False False YPTQLFRTV 77.71539 562.807788074017 47013416.0 15969.0 nc|ENSG00000120690|P32519-2|ELF1;;ENSG00000120690|ENST00000239882|ELF1 7.48183012008667 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15972 77.717 26.0 2907600.0 25 0 304520.0 + 4448 DAWRVPLKV 9 95 361.88174074073146 1082.6233928223944 3 361.8817016482353 MULTI CID FTMS 0 0 0 15969 2226522.25 1.0 0 0.0 3 Unmodified _DAWRVPLKV_ ENSG00000157212|ENST00000404141|PAXIP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;nc|ENSG00000157212|Q6ZW49-2|PAXIP1 41.95555342248728 0.0647214845423414 3 {[DA]|[EG]}V[WR]P{I|L}KV 9 2 + 47.268 0.0 0.0 4.3661 4.3661 53.613 0.0 0.0 0.0 20.312991404218472 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.6747425010840047 {[DA]|[EG]}V[WR]P{I|L}KV;{[DA]|[EG]}V[WR]P{I|L}VK;{[DA]|[EG]}V[WR]VK[{I|L}P];{[DA]|[EG]}V[WR]V[{I|L}P]K;[{I|L}P]KVW[KQ]{[QG]|[NA]};[R{M(Oxidation (M))|F}][VG][PA]P{I|L}VK;[R{M(Oxidation (M))|F}][VG][PA]P{I|L}KV 4.3661;4.3661;3.0645;2.9593;0.95145;0.60545;0.60545 -;-;-;-;-;-;- 396 + 1 1.257 66920.6 1.0 10338 5632 15969 HBL1_DMSO_200M_050219_1,15972 HBL1_DMSO_200M_050219_1,15972,DAWRVPLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15973 77.718 24.0 2261500.0 25 0 373770.0 + 3282 AYHGLTVPL 9 82 485.77206504871015 969.5295771642204 2 485.7732116580009 MULTI CID FTMS 0 0 0 15969 1024794.625 0.3109929514115726 -4 0.1772079467773437 4 Unmodified _AYHGLTVPL_ ENSG00000113732|ENST00000519374|ATP6V0E1 26.34127834903884 0.1960301806784604 3 T{I|L}G[HC]{I|L} 6 7 21.119 0.0 0.0 2.1783 0.0 0.0 327.21403868941405 0.0 327.21403868941405 0.0 7.624562618571247 0.0 0.0 0 0.0 0.0 0.5 0.0 T{I|L}G[HC]{I|L} 2.1783 - 92 + 1 1.257 47593.8 1.0 10339 5632 15969 HBL1_DMSO_200M_050219_1,15973 HBL1_DMSO_200M_050219_1,15973,AYHGLTVPL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15974 77.719 40.0 1082500.0 25 0 99512.0 + 39826 VEVSLQRTVT 10 77 566.322423852966 1130.630294772732 2 566.3231689333916 MULTI CID FTMS 0 0 0 15969 674953.1875 0.2910351350124782 13 -1.1379241943359375 5 Unmodified _VEVSLQRTVT_ REV__ENSG00000100599|ENST00000216487|RIN3;REV__ENST00000418924.6_1_14:93042630-93154594:+|nuORF;REV__ENST00000553959.1_1_14:93125773-93154048:+|nuORF;REV__nc|ENSG00000100599|Q8TB24-4|RIN3 13.90604991867851 0.6142120002215601 3 [VS]W 3 -1 20.29 0.0 0.0 1.7946 0.0 0.0 0.0 755.428365411657 755.428365411657 5.056832425925624 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VS]W 1.7946 - 57 1 1.257 40668.7 1.0 10340 5632 15969 HBL1_DMSO_200M_050219_1,15974 HBL1_DMSO_200M_050219_1,15974,VEVSLQRTVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15975 77.721 66.0 1272100.0 25 0 105540.0 + 29328 QIMEDLRTL 9 105 559.7965370514263 0 559.7951537966728 PEAK CID FTMS 0 0 0 15969 682733.9375 1.0 0 0.0 6 Unmodified _QIMEDLRTL_ ENSG00000111707|ENST00000543473|SUDS3 36.506200033944 0.0788933506710822 3 MWM{I|L}TE 6 6 34.008 0.0 0.0 3.043 0.0 0.0 241.1391151859144 82.06698023013905 323.2060954160534 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 1.642159058960253 0.0 MWM{I|L}TE 3.043 - 221 + 1 1.257 69975.6 1.0 10341 5632 15969 HBL1_DMSO_200M_050219_1,15975 HBL1_DMSO_200M_050219_1,15975,QIMEDLRTL True True QIMEDLRTL 77.720524 559.795153796673 6234711.5 15969.0 ENSG00000111707|ENST00000543473|SUDS3 5.019261439641316 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15976 77.728 431.0 420430.0 25 0 17743.0 + 25087 MPWEQIRDV 9 193 587.2890800821284 1172.5636072310567 2 587.2910034060478 MULTI CID FTMS 0 0 0 15969 367971.75 0.810490267244167 2 -0.1706314086914062 7 Unmodified _MPWEQIRDV_ ENSG00000174231|ENST00000304992|PRPF8 66.45667989310934 0.0225072657982126 3 MPWEQ{I|L}[RD]V 9 0 + 83.564 0.0 0.0 7.1266 7.1266 91.068 0.0 0.0 0.0 50.43035975629763 3.663385648463816 3.663385648463816 9.208187539523747 0 0.9291746928241128 1.3010299956639813 0.5752574989159953 1.0189301784845295 + + MPWEQ{I|L}[RD]V;MP{[DA]|[EG]}EQ{I|L}[RD]V;MPWE[AG]{I|L}[RD]V;MPW[TA]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[DP];MPVCR{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[DP];MPV{M(Oxidation (M))|F}[RK]MHQ;MPV{M(Oxidation (M))|F}[RK][PS][DP];MV[PS]EQ{I|L}[RD]V;MPWE{[QS]|[NT]}[VP]S{I|L};MPWE{[QS]|[NT]}[VP]TV 7.1266;6.3413;6.3413;5.3753;4.9794;4.7892;4.7271;4.7036;4.6044;4.5819 +;-;-;-;-;-;-;-;-;- + 3407 + 1 1.257 140166.4 1.0 10342 5632 15969 HBL1_DMSO_200M_050219_1,15976 HBL1_DMSO_200M_050219_1,15976,MPWEQIRDV True True MPWEQIRDV 77.728217 587.291003406048 3497160.75 15969.0 ENSG00000174231|ENST00000304992|PRPF8 7.822075366973877 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15977 77.736 414.0 207630.0 25 0 36537.0 22763 LQPKKKREEPT 11 124 677.3950840275277 1352.7756151218553 2 677.3958007693291 MULTI CID FTMS 0 0 0 15969 349224.9375 0.4176834977239175 -9 0.4249114990234375 8 Unmodified _LQPKKKREEPT_ ENSG00000089195|ENST00000203001|TRMT6;ENST00000473131.5_1_20:5924535-5931132:-|nuORF;nc|ENSG00000089195|Q9UJA5-2|TRMT6;nc|ENSG00000089195|Q9UJA5-3|TRMT6 2.9952420565917617 0.861016188266951 3 [DP]V 3 10 11.215 0.0 0.0 0.82902 0.0 0.0 0.0 1038.6036845400772 1038.6036845400772 1.2147820449879312 0.0 0.0 0.0 0 0.0 0.5528419686577808 0.0 0.0 [DP]V 0.82902 - 184 1 1.257 72710.7 1.0 10343 5632 15969 HBL1_DMSO_200M_050219_1,15977 HBL1_DMSO_200M_050219_1,15977,LQPKKKREEPT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15978 77.744 448.0 286600.0 25 0 18436.0 -1 0 115 994.4471506849866 1986.879748436773 2 994.4474975466728 MULTI CID FTMS 0 0 0 15969 317996.4375 0.796727648802652 -2 0.1191177368164062 9 3 [{I|L}T][YQ]{M(Oxidation (M))|F}{I|L}G{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EN 12 -1 60.478 0.0 0.0 3.0439 0.0 0.0 0.0 571.1274508111936 571.1274508111936 19.966051073990258 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.2887254899964357 1.579689690656103 [{I|L}T][YQ]{M(Oxidation (M))|F}{I|L}G{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EN 3.0439 - 3226 + 1 1.257 88974.0 1.0 10344 5632 15969 HBL1_DMSO_200M_050219_1,15978 HBL1_DMSO_200M_050219_1,15978, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15979 77.751 440.0 171770.0 25 0 9889.7 27668 PLHQKQSRIT 10 137 604.3483545669761 1206.6821562007522 2 604.3499633669853 MULTI CID FTMS 0 0 0 15969 328997.78125 0.0810411920500764 20 -1.736968994140625 10 Unmodified _PLHQKQSRIT_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 10.073929032068715 0.6785112666868882 3 [{I|L}V]N 3 9 17.447 0.0 0.0 1.4459 0.0 0.0 0.0 877.464083040849 877.464083040849 6.188215083997942 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [{I|L}V]N 1.4459 - 170 1 1.257 57793.6 1.0 10345 5632 15969 HBL1_DMSO_200M_050219_1,15979 HBL1_DMSO_200M_050219_1,15979,PLHQKQSRIT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15980 77.756 226.0 641790.0 25 0 57575.0 + 18196 KVAELFEKL 9 145 359.54979600181684 1075.6275586056506 3 359.5497314333916 MULTI CID FTMS 0 0 0 15969 294145.25 0.7716122002410589 -2 0.1191177368164062 11 Unmodified _KVAELFEKL_ ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF 35.61225514009592 0.0995432151795903 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}G{I|L}{M(Oxidation (M))|F}E{I|L}K 9 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}G{I|L} + + 29.699 21.968 4.0657 2.761 2.761 49.749 0.0 0.0 0.0 0.0 12.932597985977663 0.0 0.0 0 0.4247425010840047 0.0 0.6989700043360187 0.4005149978319906 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}G{I|L}{M(Oxidation (M))|F}E{I|L}K 2.761 - 216 + 1 1.257 116904.8 1.0 10346 5632 15969 HBL1_DMSO_200M_050219_1,15980 HBL1_DMSO_200M_050219_1,15980,KVAELFEKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15981 77.76 241.0 552760.0 25 0 42700.0 + 41860 VPYPLPKI 8 147 463.7892037353869 925.563854537574 2 463.7897521853447 MULTI CID FTMS 0 0 0 15969 270353.4375 0.0536908195823727 -9 0.4249114990234375 12 Unmodified _VPYPLPKI_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1 44.40701690623563 0.1655546087385432 3 VPYP{I|L}PK{I|L} 8 0 + 64.824 0.0 0.0 7.0037 7.0037 93.875 0.0 0.0 0.0 29.011459692238688 14.024174299985006 14.024174299985006 22.04628427264403 0 0.7302046884880937 1.2218487496163564 0.0 0.0 + + VPYP{I|L}PK{I|L};VRNS{I|L}PK{I|L};VQAAS{I|L}PK{I|L};VRGGS{I|L}PK{I|L};V[VG]NS{I|L}PK{I|L};VRN[K{I|L}]PS{I|L};V[VG]GGS{I|L}PK{I|L};VQAA[K{I|L}]PS{I|L};VRN[K{I|L}]PTV;VRN[K{I|L}]TPV 7.0037;4.6218;4.1785;3.6211;3.6211;2.8312;2.6262;2.3879;2.1084;1.9557 +;-;-;-;-;-;-;-;-;- + 596 + 1 1.257 107862.6 1.0 10347 5632 15969 HBL1_DMSO_200M_050219_1,15981 HBL1_DMSO_200M_050219_1,15981,VPYPLPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15982 77.763 134.0 230050.0 25 0 12345.0 + 32060 RVLEKPESLLL 11 68 648.8976979226226 1295.780842912045 2 648.8990356326103 MULTI CID FTMS 0 0 0 15969 231516.40625 0.179437793993852 9 -0.8113861083984375 13 Unmodified _RVLEKPESLLL_ ENSG00000137221|ENST00000372449|TJAP1;ENST00000454762.1_1_6:43472456-43473590:+|nuORF;nc|ENSG00000137221|Q5JTD0-2|TJAP1;nc|ENSG00000137221|Q5JTD0-4|TJAP1 16.13717665003241 0.6994749584679478 3 EKPE{[TV]|[{I|L}S]}{I|L}{I|L} 8 3 30.182 0.0 0.0 2.3293 0.0 0.0 368.2544728009781 0.0 368.2544728009781 0.0 23.192672072328904 0.0 0.0 0 0.6989700043360187 0.0 0.3807196863200844 0.0 + EKPE{[TV]|[{I|L}S]}{I|L}{I|L} 2.3293 + + 34 1 1.257 29983.9 1.0 10348 5632 15969 HBL1_DMSO_200M_050219_1,15982 HBL1_DMSO_200M_050219_1,15982,RVLEKPESLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15983 77.777 717.0 344180.0 25 0 34005.0 17730 KPVLLPEL 8 220 454.794397495079 0 454.7936889529228 PEAK CID FTMS 0 0 0 15969 214727.203125 1.0 0 0.0 14 Unmodified _KPVLLPEL_ ENSG00000155229|ENST00000438925|MMS19;ENST00000485400.1_1_10:99219355-99219481:-|nuORF;nc|ENSG00000155229|Q96T76-5|MMS19;nc|ENSG00000155229|Q96T76-8|MMS19;nc|ENSG00000155229|Q96T76-9|MMS19 34.10243960390752 0.1934076185521331 3 PPE 3 5 15.578 0.0 0.0 1.7165 0.0 0.0 453.3279174493393 128.07209192447502 581.4000093738143 0.0 0.0 0.0 0.0 0 0.2302046884880938 0.0 0.7614393726401688 0.0 PPE 1.7165 - 362 + 1 1.257 187926.8 1.0 10349 5632 15969 HBL1_DMSO_200M_050219_1,15983 HBL1_DMSO_200M_050219_1,15983,KPVLLPEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15984 77.787 616.0 287840.0 25 0 23428.0 -1 0 117 811.4021676939325 3241.5795649093297 4 811.9052001833916 MULTI CID FTMS 0 0 0 15969 172464.21875 0.9767212487494225 -2 0.1191177368164062 15 3 [Q{I|L}]{I|L}AVVA 7 -1 29.965 0.0 0.0 0.92441 0.0 0.0 0.0 2544.117686817786 2544.117686817786 12.542644353703524 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [Q{I|L}]{I|L}AVVA 0.92441 - 4970 1 1.257 129052.6 1.0 10350 5632 15969 HBL1_DMSO_200M_050219_1,15984 HBL1_DMSO_200M_050219_1,15984, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 15985 77.791 184.0 687620.0 25 0 95542.0 + 6547 EALKIFQKI 9 115 363.8938322448594 1088.6596673347783 3 363.8937255740166 MULTI CID FTMS 0 0 0 15969 183586.390625 0.3834812063503378 -2 0.1191177368164062 16 Unmodified _EALKIFQKI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 23.78978130925829 0.2284941198415988 3 {[CP]|[EA]}{I|L}K{I|L}{M(Oxidation (M))|F}QK{I|L} 9 0 + 45.074 0.0 0.0 4.1403 4.1403 75.011 0.0 0.0 0.0 7.147642715192504 3.106812907582011 3.106812907582011 3.106812907582011 0 0.0 0.0 0.0 0.6022338482433752 + + {[CP]|[EA]}{I|L}K{I|L}{M(Oxidation (M))|F}QK{I|L};{[CP]|[EA]}{I|L}K{I|L}{M(Oxidation (M))|F}Q{I|L}K;{[CP]|[EA]}{I|L}{I|L}K{M(Oxidation (M))|F}QK{I|L};{[CP]|[EA]}{I|L}{I|L}K{M(Oxidation (M))|F}Q{I|L}K;{[CP]|[EA]}{I|L}K{I|L}{M(Oxidation (M))|F}[AG]K{I|L};{[CP]|[EA]}{I|L}K{I|L}{M(Oxidation (M))|F}[AG]{I|L}K;{[CP]|[EA]}{I|L}{I|L}K{M(Oxidation (M))|F}[AG]K{I|L};{[CP]|[EA]}{I|L}{I|L}K{M(Oxidation (M))|F}[AG]{I|L}K 4.1403;3.8549;3.702;3.4166;3.2945;3.0091;2.8562;2.5708 +;-;-;-;-;-;-;- + 221 + 1 1.257 105331.0 1.0 10351 5632 15969 HBL1_DMSO_200M_050219_1,15985 HBL1_DMSO_200M_050219_1,15985,EALKIFQKI False True EALKIFQKI 77.790842 363.893725574017 3619530.75 15969.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 3.104454676310221 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15986 77.796 302.0 465300.0 25 0 42869.0 + 32655 SDAIPGLKI 9 161 457.2713009316498 912.5280489300995 2 457.2695495486259 MULTI CID FTMS 0 0 0 15969 168048.25 0.058965115481425 10 -0.8990097045898438 17 Unmodified _SDAIPGLKI_ ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15 30.63653989081413 0.1413794767160703 3 {[DS]|[MA]|[CV]|TT}A{I|L} 4 5 27.708 0.0 0.0 3.0364 0.0 0.0 0.0 523.324990418634 523.324990418634 8.669815564889127 0.0 0.0 0.0 0 0.9247425010840048 0.6777807052660807 0.0 0.0 + {[DS]|[MA]|[CV]|TT}A{I|L} 3.0364 + + 451 1 1.257 110216.3 1.0 10352 5632 15969 HBL1_DMSO_200M_050219_1,15986 HBL1_DMSO_200M_050219_1,15986,SDAIPGLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15987 77.808 687.0 173690.0 25 0 4348.0 16722 KEVSKAPE 8 134 887.4830646521275 886.4757881855274 1 889.9075195193291 MULTI CID FTMS 0 0 0 15969 188311.453125 0.8829979456189812 -2 0.1191177368164062 18 Unmodified _KEVSKAPE_ ENSG00000151461|ENST00000357604|UPF2 37.97399986684836 0.2681860861828418 3 {[VA]|[{I|L}G]}S[KS][HM]K 8 6 + 30.34 0.0 0.0 3.4225 3.4225 72.18 0.0 0.0 0.0 7.258629559206966 4.54494564943003 4.54494564943003 2.76679965628567 0 0.4247425010840047 1.3979400086720375 0.5 0.0 {[VA]|[{I|L}G]}S[KS][HM]K;{[VA]|[{I|L}G]}SVPV[C(Carbamidomethyl (C))R];{[VA]|[{I|L}G]}SPVV[C(Carbamidomethyl (C))R];{[VA]|[{I|L}G]}S[KS]VA[EP];[{I|L}V]{M(Oxidation (M))|F}{I|L}[HM]K;{[VA]|[{I|L}G]}SV{[WT]|[RM]}[QP];{[VA]|[{I|L}G]}VSPV[C(Carbamidomethyl (C))R];{[VA]|[{I|L}G]}SV{[TV]|[{I|L}S]}S[QP];{[VA]|[{I|L}G]}SV{[MG]|[TS]}V[QP];KTE{I|L}[NS][VP] 3.4225;3.1104;2.6148;2.5713;2.5541;2.0656;2.0082;1.6683;1.6683;1.662 -;-;-;-;-;-;-;-;-;- 1902 1 1.257 80442.2 1.0 10353 5632 15969 HBL1_DMSO_200M_050219_1,15987 HBL1_DMSO_200M_050219_1,15987,KEVSKAPE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15988 77.82 618.0 184780.0 25 0 11696.0 + 5427 DLMKLILDKL 10 181 601.3667363076115 0 601.3685790896416 PEAK CID FTMS 0 0 0 15969 114375.1796875 1.0 0 0.0 19 Unmodified _DLMKLILDKL_ REV__ENSG00000004660|ENST00000348335|CAMKK1;REV__nc|ENSG00000004660|Q8N5S9-2|CAMKK1 13.042465956692816 0.351733747982019 3 EE 2 -1 9.464 0.0 0.0 0.78819 0.0 0.0 230.20050034784168 709.4129290504865 939.6134293983282 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EE 0.78819 - 615 + 1 1.257 84747.7 1.0 10354 5632 15969 HBL1_DMSO_200M_050219_1,15988 HBL1_DMSO_200M_050219_1,15988,DLMKLILDKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15990 77.825 16.0 3530600.0 25 0 395950.0 + 42755 VVFVQQLIAGN 11 63 594.342714454846 1186.670875976492 2 594.3431274294853 MULTI CID FTMS 0 0 0 15989 2923768.75 0.8615021997446523 1 -0.06024169921875 1 Unmodified _VVFVQQLIAGN_ REV__ENSG00000169251|ENST00000351193|NMD3;REV__ENST00000473909.5_1_3:160939100-160952664:+|nuORF;REV__ENST00000478160.1_1_3:160945095-160953023:+|nuORF 13.042465956692816 0.7638483625850725 3 VV{M(Oxidation (M))|F} 3 -1 54.693 0.0 0.0 4.6089 0.0 0.0 0.0 838.4430658353916 838.4430658353916 44.20818753952375 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 VV{M(Oxidation (M))|F} 4.6089 + + 61 + 1 1.257 45140.7 1.0 10355 5633 15989 HBL1_DMSO_200M_050219_1,15990 HBL1_DMSO_200M_050219_1,15990,VVFVQQLIAGN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15991 77.826 16.0 1442900.0 25 0 176980.0 + 30924 RKDLNDLHIK 10 46 626.3609505499721 1250.7073481667442 2 626.3617431521416 MULTI CID FTMS 0 0 0 15989 2989409.0 0.9397430190638938 -1 0.1103897094726562 2 Unmodified _RKDLNDLHIK_ REV__ENSG00000112159|ENST00000369393|MDN1 1.4819007175156935 0.719781833666733 3 C 1 -1 4.6041 0.0 0.0 0.36812 0.0 0.0 537.3916265864692 607.2957857721311 1144.6874123586003 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.36812 - 3 + 1 1.257 23090.9 1.0 10356 5633 15989 HBL1_DMSO_200M_050219_1,15991 HBL1_DMSO_200M_050219_1,15991,RKDLNDLHIK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15992 77.827 21.0 3295400.0 25 0 538350.0 + 23914 LVNITISPYSL 11 64 610.3484104945563 1218.6822680559126 2 610.3486816287041 MULTI CID FTMS 0 0 0 15989 2496779.75 0.9161117806333324 -1 0.1103897094726562 3 Unmodified _LVNITISPYSL_ REV__ENSG00000104055|ENST00000220420|TGM5;REV__nc|ENSG00000104055|O43548-2|TGM5 2.9952420565917617 0.861016188266951 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.257 57584.1 1.0 10357 5633 15989 HBL1_DMSO_200M_050219_1,15992 HBL1_DMSO_200M_050219_1,15992,LVNITISPYSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15993 77.828 25.0 2053700.0 25 0 400560.0 + 18173 KTTPDVIFV 9 65 510.2930836202504 1018.5716143073008 2 510.2932311892509 MULTI CID FTMS 0 0 0 15989 1734968.5 0.7489288989174759 2 -0.1728668212890625 4 Unmodified _KTTPDVIFV_ ENSG00000138326|ENST00000372360|RPS24;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;ENST00000478655.5_1_10:79793659-79797065:+|nuORF;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;nc|ENSG00000138326|P62847-3|RPS24;nc|ENSG00000138326|P62847-4|RPS24;nc|ENSG00000138326|P62847|RPS24 19.256988751693697 0.3154191944385105 3 V{I|L}{M(Oxidation (M))|F}V 4 5 22.123 0.0 0.0 2.1719 0.0 0.0 542.2701283185562 0.0 542.2701283185562 0.0 -0.5457664445453503 -0.5457664445453503 0.0 0 0.7429928190999391 0.0 0.0 0.0 + V{I|L}{M(Oxidation (M))|F}V 2.1719 + + 122 1 1.257 44162.4 1.0 10358 5633 15989 HBL1_DMSO_200M_050219_1,15993 HBL1_DMSO_200M_050219_1,15993,KTTPDVIFV False True KTTPDVIFV 77.828058 510.293231189251 19004922.0 15989.0 ENST00000478655.5_1_10:79793659-79797065:+|nuORF;;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;;ENSG00000138326|ENST00000372360|RPS24;;nc|ENSG00000138326|P62847|RPS24;;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;;nc|ENSG00000138326|P62847-4|RPS24;;nc|ENSG00000138326|P62847-3|RPS24 3.1188047726949057 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15994 77.829 43.0 2255300.0 25 0 293440.0 + 27759 PLPKTKLKI 9 113 519.3577717238647 1036.7009905145294 2 519.3581420779228 MULTI CID FTMS 0 0 0 15989 1039206.375 0.5306775998245895 2 -0.1728668212890625 5 Unmodified _PLPKTKLKI_ REV__ENSG00000102531|ENST00000492622|FNDC3A;REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A 30.63653989081413 0.1413794767160703 3 [{I|L}P]N{I|L}VK{I|L} 7 -1 31.559 0.0 0.0 3.0442 0.0 0.0 0.0 256.16855578236067 256.16855578236067 5.347813329426288 0.0 0.0 0.0 0 0.3494850021680094 1.0 0.0 0.3494850021680094 [{I|L}P]N{I|L}VK{I|L} 3.0442 - 310 1 1.257 77374.0 1.0 10359 5633 15989 HBL1_DMSO_200M_050219_1,15994 HBL1_DMSO_200M_050219_1,15994,PLPKTKLKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15995 77.831 60.0 954330.0 25 0 94715.0 + 26733 NYYPYTITEY 10 74 663.7979489068186 1325.5813448804372 2 663.7985107302666 MULTI CID FTMS 0 0 0 15989 885957.1875 0.1619192169566488 -3 0.2295074462890625 6 Unmodified _NYYPYTITEY_ ENSG00000154217|ENST00000581322|PITPNC1;nc|ENSG00000154217|Q9UKF7-2|PITPNC1 36.12702656103203 0.1984647928738587 3 [{I|L}T]{M(Oxidation (M))|F}{I|L}T 5 8 30.902 0.0 0.0 2.3312 0.0 0.0 0.0 747.2636928631122 747.2636928631122 5.5748350236920885 0.0 0.0 0.0 0 0.0 1.154901959985743 1.7302046884880935 0.0 [{I|L}T]{M(Oxidation (M))|F}{I|L}T 2.3312 - 423 1 1.257 51247.4 1.0 10360 5633 15989 HBL1_DMSO_200M_050219_1,15995 HBL1_DMSO_200M_050219_1,15995,NYYPYTITEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15996 77.832 60.0 978100.0 25 0 131980.0 41810 VPVVLNLL 8 85 433.78907148450696 865.563590035814 2 433.7893249392509 MULTI CID FTMS 0 0 0 15989 880780.125 0.7711850846567216 2 -0.1728668212890625 7 Unmodified _VPVVLNLL_ ENSG00000103227|ENST00000262301|LMF1;ENST00000569516.5_1_16:904534-921479:-|nuORF;nc|ENSG00000103227|Q96S06-2|LMF1 20.871210003555333 0.6025813472596342 3 VP 2 6 45.217 0.0 0.0 5.2239 0.0 0.0 0.0 666.4201963813974 666.4201963813974 12.503318687547209 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VP 5.2239 + + 134 + 1 1.257 51137.0 1.0 10361 5633 15989 HBL1_DMSO_200M_050219_1,15996 HBL1_DMSO_200M_050219_1,15996,VPVVLNLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15997 77.834 49.0 1195800.0 25 0 149190.0 + 29449 QLIDIIHTA 9 102 512.294762147139 1022.574971361078 2 512.2959472537041 MULTI CID FTMS 0 0 0 15989 764963.9375 0.7242763552269595 -1 0.1103897094726562 8 Unmodified _QLIDIIHTA_ ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 48.345845343767074 0.0439967357579942 3 [Q{I|L}]{I|L}D{I|L}{I|L}M{I|L} 8 3 46.477 0.0 0.0 4.5451 0.0 0.0 0.0 80.01477991275624 80.01477991275624 14.843006017314796 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.6747425010840047 0.0 [Q{I|L}]{I|L}D{I|L}{I|L}M{I|L} 4.5451 - 644 + 1 1.257 52225.0 1.0 10362 5633 15989 HBL1_DMSO_200M_050219_1,15997 HBL1_DMSO_200M_050219_1,15997,QLIDIIHTA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 15998 77.836 118.0 574930.0 25 0 99868.0 + 43393 WQRPQKRKR 9 86 641.8822122364909 1281.7498715397817 2 641.8825561404228 MULTI CID FTMS 0 0 0 15989 670460.5625 0.3902291821875073 2 -0.1728668212890625 9 Unmodified _WQRPQKRKR_ REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF 0.6014990680409731 0.8936861360942873 3 M 1 -1 10.969 0.0 0.0 0.85579 0.0 0.0 1132.69841692728 0.0 1132.69841692728 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.85579 - 12 + 1 1.257 55246.8 1.0 10363 5633 15989 HBL1_DMSO_200M_050219_1,15998 HBL1_DMSO_200M_050219_1,15998,WQRPQKRKR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 15999 77.84 182.0 686320.0 25 0 120710.0 + 1356 ALAAALAHI 9 114 425.7607414084019 849.5069298836038 2 425.7608520388603 MULTI CID FTMS 0 0 0 15989 563087.875 0.8400225040176422 -1 0.1103897094726562 10 Unmodified _ALAAALAHI_ ENSG00000107625|ENST00000373585|DDX50;ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21 67.41302359171755 0.0220989861905124 3 [{I|L}A]AAA{I|L}AH{I|L} 9 0 + 84.575 0.0 0.0 9.9558 9.9558 97.439 0.0 0.0 0.0 28.99166239860314 11.082268588648247 11.082268588648247 16.505149978319906 0 1.774227503252014 2.0 0.0 0.0 + + [{I|L}A]AAA{I|L}AH{I|L};[{I|L}A]AAAH{I|L}A{I|L};[{I|L}A]AAHA{I|L}A{I|L};[{I|L}A]AAH{I|L}AA{I|L};[{I|L}A]{[NV]|[RG]}{I|L}AH{I|L};[{I|L}A]AHAA{I|L}A{I|L};[{I|L}A]AHA{I|L}AA{I|L};AA{I|L}AAH{I|L}A{I|L};[{I|L}A]HAAA{I|L}A{I|L};[{I|L}A]HAA{I|L}AA{I|L} 9.9558;8.0129;6.8626;6.6554;6.3403;6.2741;6.0668;5.789;5.4782;5.2709 +;-;-;-;-;-;-;-;-;- + 639 + 1 1.257 101918.9 1.0 10364 5633 15989 HBL1_DMSO_200M_050219_1,15999 HBL1_DMSO_200M_050219_1,15999,ALAAALAHI True True ALAAALAHI 77.839548 425.76085203886 4986551.5 15989.0 ENSG00000107625|ENST00000373585|DDX50;;nc|ENSG00000165732|Q9NR30-2|DDX21;;ENSG00000165732|ENST00000354185|DDX21 5.293262163798015 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16000 77.842 105.0 690310.0 25 0 52320.0 + 2374 AQMDYQLRL 9 99 569.2915157649128 0 569.2922851443291 PEAK CID FTMS 0 0 0 15989 563481.1875 1.0 0 0.0 11 Unmodified _AQMDYQLRL_ ENSG00000008382|ENST00000599840|MPND;nc|ENSG00000008382|Q8N594-2|MPND;nc|ENSG00000008382|Q8N594|MPND 34.40172386719151 0.0892392376003579 3 MDYQ{I|L}R 6 3 31.943 0.0 0.0 2.8105 0.0 0.0 199.0998150473951 128.0719393365844 327.17175438397953 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 + MDYQ{I|L}R 2.8105 + + 77 + 1 1.257 60033.8 1.0 10365 5633 15989 HBL1_DMSO_200M_050219_1,16000 HBL1_DMSO_200M_050219_1,16000,AQMDYQLRL True True AQMDYQLRL 77.841798 569.292285144329 3547263.0 15989.0 nc|ENSG00000008382|Q8N594-2|MPND;;nc|ENSG00000008382|Q8N594|MPND;;ENSG00000008382|ENST00000599840|MPND 6.114222208658855 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16001 77.844 103.0 595590.0 25 0 112390.0 + 259 ADAPVALVV 9 88 427.7527245006685 853.4908960681371 2 427.7528869509697 MULTI CID FTMS 0 0 0 15989 543210.625 0.0358326437839165 3 -0.2783279418945312 12 Unmodified _ADAPVALVV_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 21.74664581756881 0.2544899275067181 3 [VP]AADA 6 6 29.359 0.0 0.0 3.4398 0.0 0.0 0.0 326.21017032034337 326.21017032034337 14.665762445130504 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3494850021680094 0.0 [VP]AADA 3.4398 - 129 1 1.257 53528.5 1.0 10366 5633 15989 HBL1_DMSO_200M_050219_1,16001 HBL1_DMSO_200M_050219_1,16001,ADAPVALVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16002 77.848 214.0 925230.0 25 0 111990.0 + 21973 LPPNVQII 8 150 447.2760754538383 892.5375979744765 2 447.2758972048759 MULTI CID FTMS 0 0 0 15989 393713.625 0.4905121131477723 8 -0.7009963989257812 13 Unmodified _LPPNVQII_ ENSG00000100099|ENST00000398145|HPS4;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000496385.5_1_22:26849136-26861668:-|nuORF;nc|ENSG00000100099|Q9NQG7-2|HPS4;nc|ENSG00000100099|Q9NQG7-3|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4 59.79521254764295 0.1151759508933577 3 [{I|L}P]NPVQ{I|L}{I|L} 8 2 + 57.343 0.0 0.0 6.4247 6.4247 81.563 0.0 0.0 0.0 15.051499783199064 14.024174299985006 14.024174299985006 2.865320089195592 0 0.5 1.3010299956639813 0.0 0.9489700043360187 [{I|L}P]NPVQ{I|L}{I|L};[{I|L}P]NPN{I|L}{I|L}{I|L};[{I|L}P]NPV[AG]{I|L}{I|L};[{I|L}P]NNP{I|L}{I|L}{I|L};[{I|L}P]GGPVQ{I|L}{I|L};[{I|L}P]NPGG{I|L}{I|L}{I|L};[{I|L}P]GGPN{I|L}{I|L}{I|L};[NP]P{I|L}VQ{I|L}{I|L};[NP]{I|L}PVQ{I|L}{I|L};[AG]VPPVQ{I|L}{I|L} 6.4247;6.1037;5.387;5.2318;5.0797;5.066;5.066;4.7383;4.5411;4.4922 -;-;-;-;-;-;-;-;-;- 847 1 1.257 157089.8 1.0 10367 5633 15989 HBL1_DMSO_200M_050219_1,16002 HBL1_DMSO_200M_050219_1,16002,LPPNVQII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16003 77.853 263.0 571930.0 25 0 62822.0 40700 VLGFALIV 8 148 416.2705509744676 830.5265490157352 2 416.2708007693291 MULTI CID FTMS 0 0 0 15989 381842.375 0.0292528843414307 13 -1.155792236328125 14 Unmodified _VLGFALIV_ ENSG00000091262|ENST00000205557|ABCC6;ENST00000574094.5_1_16:16275679-16317348:-|nuORF;nc|ENSG00000091262|O95255-3|ABCC6 32.45364647766026 0.3613649037604678 3 [{I|L}V]PK{I|L}YV 7 4 + 35.577 0.0 0.0 4.2837 4.2837 79.905 0.0 0.0 0.0 15.655627129319676 3.6979866914778015 3.6979866914778015 7.257724967479856 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK{I|L}YV;[{I|L}V]PKYV{I|L};[{I|L}V]V[YK]P{I|L};[Y{I|L}]KPV{I|L}V;[KP]{I|L}YV{I|L}V;[{I|L}P]KYV{I|L}V;[KP]Y{I|L}V{I|L}V;[K{I|L}]PYV{I|L}V;[K{I|L}]YPV{I|L}V 4.2837;3.4098;2.9292;2.8989;2.7272;2.4198;1.946;1.6398;0.55243 -;-;-;-;-;-;-;-;- 224 + 1 1.257 117970.6 1.0 10368 5633 15989 HBL1_DMSO_200M_050219_1,16003 HBL1_DMSO_200M_050219_1,16003,VLGFALIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16004 77.863 551.0 549770.0 25 0 54375.0 + 8918 FAITAIKGV 9 205 460.2839544390278 918.5533559448556 2 460.2838622927666 MULTI CID FTMS 0 0 0 15989 344235.375 0.7523442090939167 -1 0.1103897094726562 15 Unmodified _FAITAIKGV_ ENSG00000231500|ENST00000439602|RPS18;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000495909.2_1_5:90650295-90650631:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 78.14939416004806 0.0179651292570206 3 {M(Oxidation (M))|F}A{I|L}TA{I|L}KGV 9 0 + 65.98 0.0 0.0 7.1831 7.1831 94.971 0.0 0.0 0.0 33.2501599747061 6.904311779353257 6.904311779353257 34.61314146609158 0 0.7134679910804405 0.0 0.3054621874040891 1.0 + + {M(Oxidation (M))|F}A{I|L}TA{I|L}KGV;{M(Oxidation (M))|F}A{I|L}Q[K{I|L}]S{I|L};{M(Oxidation (M))|F}A{I|L}Q[K{I|L}]TV;{M(Oxidation (M))|F}A{I|L}K[Q{I|L}]TV;{M(Oxidation (M))|F}A{I|L}K[Q{I|L}]S{I|L};[{I|L}A]K{M(Oxidation (M))|F}K{I|L}{[CP]|[EA]};{M(Oxidation (M))|F}A{I|L}[AG][K{I|L}]TV;{M(Oxidation (M))|F}A{I|L}[AG][K{I|L}]S{I|L};[K{I|L}]A{M(Oxidation (M))|F}K{I|L}{[CP]|[EA]};[{I|L}A]{M(Oxidation (M))|F}KK{I|L}{[CP]|[EA]} 7.1831;3.4148;3.4148;3.169;3.169;2.6101;2.4065;2.4065;2.2886;1.6416 +;-;-;-;-;-;-;-;-;- + 1223 + 1 1.257 232076.6 1.0 10369 5633 15989 HBL1_DMSO_200M_050219_1,16004 HBL1_DMSO_200M_050219_1,16004,FAITAIKGV True True FAITAIKGV 77.862579 460.283862292767 3177920.0 15989.0 ENST00000496813.5_1_6:33239896-33244045:+|nuORF;;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;;ENST00000495909.2_1_5:90650295-90650631:+|nuORF;;ENSG00000231500|ENST00000439602|RPS18 6.150491237640381 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16005 77.865 145.0 586420.0 25 0 85633.0 + 18752 LALSGCILLG 10 118 480.2837555874629 958.5529582417256 2 480.2842590212822 MULTI CID FTMS 0 0 0 15989 331093.96875 0.4087827780295934 2 -0.1728668212890625 16 Unmodified _LALSGCILLG_ REV__ENSG00000182264|ENST00000332955|IZUMO1 25.399314129420983 0.3980215340001851 3 [{I|L}A][VS]AC{I|L}A[{I|L}V] 10 -1 + 38.183 0.0 0.0 3.9834 3.9834 82.666 0.0 0.0 0.0 11.760912590556815 4.817920178372702 4.817920178372702 11.760912590556815 0 0.0 2.0 0.930884548956689 0.0 [{I|L}A][VS]AC{I|L}A[{I|L}V];{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}AC{I|L}A[{I|L}V];{[VA]|[{I|L}G]}{[TV]|[{I|L}S]}AC{I|L}A[{I|L}V];[{I|L}A][VS]{[WT]|[RM]}A[{I|L}V];{[TV]|[{I|L}S]}[Q{I|L}]C{I|L}A[{I|L}V];{[QN]|[E{I|L}]|[KN]}KAC{I|L}A[{I|L}V];[{I|L}A][VS]A{[WT]|[RM]}[{I|L}V];{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}{[WT]|[RM]}A[{I|L}V];[{I|L}A][PA]K[{M(Oxidation (M))|F}T][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}[DV]C{I|L}A[{I|L}V] 3.9834;2.7564;2.5435;2.4303;2.2715;2.2294;1.304;1.2034;1.1643;1.0857 -;-;-;-;-;-;-;-;-;- 789 1 1.257 71941.4 1.0 10370 5633 15989 HBL1_DMSO_200M_050219_1,16005 HBL1_DMSO_200M_050219_1,16005,LALSGCILLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16006 77.871 313.0 416290.0 25 0 42349.0 19829 LHFPTALT 8 152 450.2524500506379 898.4903471680758 2 450.2529785037041 MULTI CID FTMS 0 0 0 15989 241963.71875 1.0 0 0.0 17 Unmodified _LHFPTALT_ ENST00000549651.1_1_12:70636851-70637091:-|nuORF 32.116972079565 0.368454113111938 3 [H{I|L}]MT{I|L}AT{I|L} 8 5 + 48.943 0.0 0.0 5.4472 5.4472 84.867 0.0 0.0 0.0 8.93263584041749 9.731975075880328 8.93263584041749 8.93263584041749 0 1.1989700043360187 0.7695510786217261 0.6861818737241735 0.0 [H{I|L}]MT{I|L}AT{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}PT{I|L}AT{I|L};[H{I|L}]M{I|L}TAT{I|L};[{I|L}T][HM]{I|L}AT{I|L};[H{I|L}]M{I|L}ATT{I|L};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}AT{I|L};[H{I|L}]{M(Oxidation (M))|F}PTAT{I|L};[H{I|L}]{M(Oxidation (M))|F}PATT{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}P{I|L}TAT{I|L};[R{M(Oxidation (M))|F}]{I|L}TYS{I|L} 5.4472;4.453;4.2902;4.1319;3.9551;3.8984;3.6846;3.3496;3.296;3.278 -;-;-;-;-;-;-;-;-;- 449 1 1.257 102566.4 1.0 10371 5633 15989 HBL1_DMSO_200M_050219_1,16006 HBL1_DMSO_200M_050219_1,16006,LHFPTALT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16007 77.88 529.0 267420.0 25 0 25381.0 + 7813 ELITPFSKIQ 10 180 588.3355207439473 1174.6564885546943 2 588.3342162966728 MULTI CID FTMS 0 0 0 -1 0 18 Unmodified _ELITPFSKIQ_ REV__ENST00000408959.2_1_3:48955513-48955681:-|nuORF 14.838274106304384 0.5985701837916485 3 {[QN]|[E{I|L}]|[KN]}{I|L}TM 5 -1 38.218 0.0 0.0 3.2536 0.0 0.0 0.0 584.3342800835142 584.3342800835142 27.10917821584665 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9802046884880936 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}TM 3.2536 - 763 1 1.257 108846.5 1.0 10372 5633 15989 HBL1_DMSO_200M_050219_1,16007 HBL1_DMSO_200M_050219_1,16007,ELITPFSKIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16009 77.885 16.0 3150400.0 25 0 350520.0 + 3950 DALLKFSHI 9 82 522.2978129180204 1042.5810729028408 2 522.2982055544853 MULTI CID FTMS 0 0 0 16008 2207772.0 0.1158247172808598 7 -0.6407546997070312 1 Unmodified _DALLKFSHI_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 63.960520009940105 0.0238892913700936 3 {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L} 9 0 + 87.501 0.0 0.0 8.3928 8.3928 97.22 0.0 0.0 0.0 55.38582553290858 12.25268461881508 12.25268461881508 28.834172022634377 0 1.805462187404089 1.5228787452803376 0.805462187404089 0.0 + + {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L};{[DA]|[EG]}{I|L}{I|L}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}{[DS]|[MA]|[CV]|TT}[PS]{I|L};{[DA]|[EG]}{I|L}{I|L}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GG{I|L} 8.3928;5.6271;4.7262;4.4809 +;-;-;- + 161 + 1 1.273 43556.1 1.0 10373 5634 16008 HBL1_DMSO_200M_050219_1,16009 HBL1_DMSO_200M_050219_1,16009,DALLKFSHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16010 77.886 23.0 2010800.0 25 0 276040.0 + 39824 KVLELDPAL 9 73 499.3000860949121 996.585619256624 2 499.3001891970634 MULTI CID FTMS 0 0 0 16008 2034388.0 1.0 0 0.0 2 Unmodified _VEVSLGLPAL_ ENSG00000110711|ENST00000279146|AIP 38.61474834105838 0.1721950110283317 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}DPA{I|L} 9 5 + 50.551 0.0 0.0 5.0724 5.0724 85.744 0.0 0.0 0.0 1.9627248839266545 30.885540741363183 1.9627248839266545 10.511525224473814 0 1.742992819099939 0.0 0.4247425010840047 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}DPA{I|L};{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]{I|L}DPA{I|L};{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]{I|L}[WP]{I|L} 5.0724;4.0177;2.1204 -;-;- 115 1 1.273 42967.4 1.0 10374 5634 16008 HBL1_DMSO_200M_050219_1,16010 HBL1_DMSO_200M_050219_1,16010,VEVSLGLPAL False False KVLELDPAL 77.885945 499.300189197063 35787988.0 16008.0 ENSG00000110711|ENST00000279146|AIP 6.028159777323405 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16011 77.887 2.5 16128000.0 25 0 3217800.0 + 15641 IQIMKVEEI 9 66 551.8120308825914 1101.6095088319828 2 551.8129760622978 MULTI CID FTMS 0 0 0 16008 18683996.0 0.3330858423939571 3 -0.29022216796875 3 Unmodified _IQIMKVEEI_ ENSG00000105640|ENST00000222247|RPL18A;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 32.78568957990786 0.1150597335874693 3 [Q{I|L}]{I|L}[{M(Oxidation (M))|F}V]E[Q{I|L}]{I|L} 9 3 + 49.842 0.0 0.0 4.5245 4.5245 85.643 0.0 0.0 0.0 8.651567425678408 31.34697482522072 8.651567425678408 19.75649969964585 0 1.325257498915995 1.2218487496163564 0.0 0.4247425010840047 [Q{I|L}]{I|L}[{M(Oxidation (M))|F}V]E[Q{I|L}]{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}VEE[Q{I|L}]{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{I|L}EE[Q{I|L}]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KVEE[Q{I|L}]{I|L};[AG]{I|L}{I|L}[{M(Oxidation (M))|F}V]E[Q{I|L}]{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}D{I|L}E[Q{I|L}]{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VE{I|L}E[Q{I|L}]{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}DE{I|L}[Q{I|L}]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KD{I|L}E[Q{I|L}]{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VEE{I|L}[Q{I|L}]{I|L} 4.5245;2.731;2.4578;2.3698;2.309;2.2979;2.0247;1.9367;1.9367;1.6634 -;-;-;-;-;-;-;-;-;- 266 1 1.273 37259.8 1.0 10375 5634 16008 HBL1_DMSO_200M_050219_1,16011 HBL1_DMSO_200M_050219_1,16011,IQIMKVEEI True True IQIMKVEEI 77.887122 551.812976062298 789091456.0 16008.0 ENSG00000105640|ENST00000222247|RPL18A;;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 2.5198421478271484 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16012 77.888 27.0 2921700.0 25 0 688410.0 + 32248 RWPDYVREL 9 63 617.3225132351072 1232.6304735370145 2 617.3228637576103 MULTI CID FTMS 0 0 0 16008 1758362.75 0.3344857999361983 18 -1.5663375854492188 4 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 47.7319792270244 0.0453426645642791 3 [WR][DP]YVRE{I|L} 9 0 + 61.819 0.0 0.0 5.0152 5.0152 76.755 0.0 0.0 0.0 2.750678166152128 2.750678166152128 2.750678166152128 2.750678166152128 0 1.3494850021680094 1.3979400086720375 0.0 0.3252574989159953 + + [WR][DP]YVRE{I|L};RW[DP]R[YV]E{I|L};{I|L}{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R[YV]E{I|L};{I|L}{M(Oxidation (M))|F}R{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[YV]E{I|L} 5.0152;4.7921;3.1162;2.7106 +;-;-;- + 139 1 1.273 63979.0 1.0 10376 5634 16008 HBL1_DMSO_200M_050219_1,16012 HBL1_DMSO_200M_050219_1,16012,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16013 77.889 20.0 2958700.0 25 0 328190.0 + 13617 HPPSHWPLI 9 91 542.2903820269429 1082.5662111206857 2 542.2910034060478 MULTI CID FTMS 0 0 0 16008 1071502.875 0.0884523460652638 -13 0.7985305786132812 5 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 28.486842064014134 0.1687311288560894 3 [{I|L}P][C(Carbamidomethyl (C))H]PH 6 6 22.113 0.0 0.0 2.0426 0.0 0.0 0.0 338.20891846250305 338.20891846250305 8.618187372417339 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 [{I|L}P][C(Carbamidomethyl (C))H]PH 2.0426 - 201 1 1.273 51172.2 1.0 10377 5634 16008 HBL1_DMSO_200M_050219_1,16013 HBL1_DMSO_200M_050219_1,16013,HPPSHWPLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16014 77.891 53.0 1015700.0 25 0 110860.0 + -1 SLEKRCSL 8 98 496.7623068136208 991.5100606940416 2 496.7609130740166 MULTI CID FTMS 0 0 0 16008 575093.75 0.0686014469086308 9 -0.8123245239257812 6 Carbamidomethyl (C) _SLEKRC(Carbamidomethyl (C))SL_ REV__ENSG00000143147|ENST00000682931|GPR161;REV__ENST00000493800.1_1_1:168059784-168074118:-|nuORF;REV__nc|ENSG00000143147|Q8N6U8-2|GPR161;REV__nc|ENSG00000143147|Q8N6U8-6|GPR161 19.438996006549623 0.6237395211498085 3 {[TV]|[{I|L}S]}[KT][C(Carbamidomethyl (C))S]PS{I|L} 9 -1 {[TV]|[{I|L}S]}[KT][C(Carbamidomethyl (C))S]P + + 16.788 3.1775 0.41086 1.6932 1.6932 48.636 0.0 0.0 0.0 0.0 5.678688099328575 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {[TV]|[{I|L}S]}[KT][C(Carbamidomethyl (C))S]PS{I|L} 1.6932 - 137 + 1 1.273 46865.4 1.0 10378 5634 16008 HBL1_DMSO_200M_050219_1,16014 HBL1_DMSO_200M_050219_1,16014,SLEKRCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16015 77.892 47.0 1169800.0 25 0 120840.0 -1 LVSHCPHSL 9 109 525.2638850097591 0 525.2601196169853 PEAK CID FTMS 0 0 0 16008 518111.03125 0.5046279711077175 4 -0.408966064453125 7 Carbamidomethyl (C) _LVSHC(Carbamidomethyl (C))PHSL_ ENSG00000160294|ENST00000291688|MCM3AP;ENST00000467026.5_1_21:47655184-47679082:-|nuORF;ENST00000486937.5_1_21:47655184-47666418:-|nuORF;ENST00000496607.5_1_21:47655184-47686088:-|nuORF;nc|ENSG00000160294|O60318-2|MCM3AP 13.50788311687929 0.2720325786695375 3 N 1 -1 8.7371 0.0 0.0 0.83329 0.0 0.0 581.36177162909 350.08591638736567 931.4476880164556 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 N 0.83329 - 93 + 1 1.273 49481.6 1.0 10379 5634 16008 HBL1_DMSO_200M_050219_1,16015 HBL1_DMSO_200M_050219_1,16015,LVSHCPHSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16016 77.899 377.0 302460.0 25 0 52708.0 42098 VRHTRHPKLR 10 151 650.3958756015004 1298.7771982698007 2 650.3964721560478 MULTI CID FTMS 0 0 0 16008 479443.65625 0.2761912019308005 3 -0.29022216796875 8 Unmodified _VRHTRHPKLR_ ENST00000311413.4_1_11:119205294-119205741:+|nuORF 1.4819007175156935 0.719781833666733 3 {I|L} 1 9 10.969 0.0 0.0 0.84457 0.0 0.0 1167.682240849682 0.0 1167.682240849682 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.84457 + + 241 + 1 1.273 97764.2 1.0 10380 5634 16008 HBL1_DMSO_200M_050219_1,16016 HBL1_DMSO_200M_050219_1,16016,VRHTRHPKLR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16017 77.906 410.0 350870.0 25 0 18092.0 + 34034 FPFPETPTKV 10 189 582.3351836576426 1162.655814382085 2 582.3349487185478 MULTI CID FTMS 0 0 0 16008 426457.40625 0.1870697774162732 9 -0.8123245239257812 9 Unmodified _SLKMRISCLL_ nc|ENSG00000182087|Q4ZIN3-2|TMEM259;ENSG00000182087|ENST00000356663|TMEM259 9.38312468134398 0.6832340498775793 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F} 3 8 23.557 0.0 0.0 2.0261 0.0 0.0 0.0 768.4439362905413 768.4439362905413 11.20452495797834 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F} 2.0261 - 1058 1 1.273 111267.5 1.0 10381 5634 16008 HBL1_DMSO_200M_050219_1,16017 HBL1_DMSO_200M_050219_1,16017,SLKMRISCLL False False FPFPETPTKV 77.90626 582.334948718548 3050457.75 16008.0 nc|ENSG00000182087|Q4ZIN3-2|TMEM259;;ENSG00000182087|ENST00000356663|TMEM259 4.766506512959798 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16018 77.908 88.0 780400.0 25 0 67818.0 + 37660 TLMAEMHVV 9 114 515.7543381201868 1029.4941233071736 2 515.7561523318291 MULTI CID FTMS 0 0 0 16008 435334.28125 0.0970450258030718 12 -1.095550537109375 10 Unmodified _TLMAEMHVV_ ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF 28.486842064014134 0.1687311288560894 3 [{I|L}T]WWYYV 7 6 + 52.853 0.0 0.0 5.1338 5.1338 87.058 0.0 0.0 0.0 15.456874413101415 14.81508216873415 14.81508216873415 15.456874413101415 0 1.0 2.0 0.2887254899964357 0.0 [{I|L}T]WWYYV;{[QN]|[E{I|L}]|[KN]}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}YYV;[{I|L}T]WW[DN]PV;[{I|L}T][DN]WWPV;{[QN]|[E{I|L}]|[KN]}D[KT][DN]PV;{[QN]|[E{I|L}]|[KN]}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}[DN]PV;[VG][WM]{I|L}YYV;{[QG]|[NA]}[C(Carbamidomethyl (C))K]{I|L}YYV;[AG]G[C(Carbamidomethyl (C))K]{I|L}YYV;[KA][C(Carbamidomethyl (C))N]{I|L}YYV 5.1338;3.6324;3.2562;3.0018;2.7538;2.6597;2.4131;2.0763;1.9713;1.7906 -;-;-;-;-;-;-;-;-;- 360 1 1.273 57961.2 1.0 10382 5634 16008 HBL1_DMSO_200M_050219_1,16018 HBL1_DMSO_200M_050219_1,16018,TLMAEMHVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16019 77.913 239.0 636770.0 25 0 62311.0 + 6650 EAWKLLKV 8 169 329.539137295964 985.595582488092 3 329.5391113162041 MULTI CID FTMS 0 0 0 16008 407312.65625 1.0 0 0.0 11 Unmodified _EAWKLLKV_ ENSG00000112984|ENST00000394894|KIF20A;nc|ENSG00000112984|O95235-2|KIF20A 12.531546534597751 0.7257836412119636 3 K{I|L}{I|L}KV 5 3 25.099 0.0 0.0 2.5466 0.0 0.0 386.1581801607263 0.0 386.1581801607263 0.0 14.399353072788784 0.0 0.0 0 0.0 0.0 0.0 0.6171302707394362 + K{I|L}{I|L}KV 2.5466 + + 126 + 1 1.273 124300.1 1.0 10383 5634 16008 HBL1_DMSO_200M_050219_1,16019 HBL1_DMSO_200M_050219_1,16019,EAWKLLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16020 77.914 67.0 1048600.0 25 0 110280.0 + 40253 VGSVDCTLVL 10 100 503.26680614918143 0 503.2672607302666 PEAK CID FTMS 0 0 0 16008 407291.84375 0.2788682902071912 -2 0.1706314086914062 12 Unmodified _VGSVDCTLVL_ REV__ENSG00000148357|ENST00000683500|HMCN2;REV__nc|ENSG00000148357|Q8NDA2-1|HMCN2;REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2 26.88365393820708 0.2428278298207118 3 {I|L}TGDQ 5 -1 29.412 0.0 0.0 2.928 0.0 0.0 230.1645804606692 257.09321008853755 487.2577905492067 0.0 0.0 0.0 0.0 0 0.5 0.0 1.0 0.0 {I|L}TGDQ 2.928 - 30 + 1 1.273 56969.2 1.0 10384 5634 16008 HBL1_DMSO_200M_050219_1,16020 HBL1_DMSO_200M_050219_1,16020,VGSVDCTLVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16021 77.923 498.0 363000.0 25 0 35911.0 + -1 LSVPNNDCMV 10 186 574.7592916255289 1147.5040303178578 2 574.7597534060478 MULTI CID FTMS 0 0 0 16008 272210.5 0.3187884165225164 37 -2.9913864135742188 13 Carbamidomethyl (C) _LSVPNNDC(Carbamidomethyl (C))MV_ REV__ENSG00000069122|ENST00000283296|ADGRF5;REV__nc|ENSG00000069122|Q8IZF2-2|ADGRF5 24.020572477871973 0.4289996903560794 3 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VP 6 -1 43.148 0.0 0.0 3.7602 0.0 0.0 0.0 502.1212557428344 502.1212557428344 29.16895006820745 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VP 3.7602 - 1818 + 1 1.273 140158.2 1.0 10385 5634 16008 HBL1_DMSO_200M_050219_1,16021 HBL1_DMSO_200M_050219_1,16021,LSVPNNDCMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16022 77.925 67.0 586110.0 25 0 73351.0 25405 NEAELFVASI 10 81 546.7815702613268 1091.5485875894535 2 546.7811157107353 MULTI CID FTMS 0 0 0 16008 216396.578125 0.1662781586938428 -2 0.1706314086914062 14 Unmodified _NEAELFVASI_ ENSG00000177489|ENST00000320065|OR2G2 13.90604991867851 0.6142120002215601 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 3 7 20.29 0.0 0.0 1.8589 0.0 0.0 0.0 741.3400972955686 741.3400972955686 8.300756084811809 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 1.8589 - 67 + 1 1.273 44156.6 1.0 10386 5634 16008 HBL1_DMSO_200M_050219_1,16022 HBL1_DMSO_200M_050219_1,16022,NEAELFVASI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16023 77.934 542.0 156900.0 25 0 19045.0 + + 16821 LPPSVLAV 8 106 795.4984466162709 0 795.4980346560478 PEAK CID FTMS 0 0 0 16008 170861.625 1.0 0 0.0 15 Unmodified _KHHRRKRRFRL_ ENSG00000186364|ENST00000334513|NUDT17 0.3506318815782774 0.47618401536486 3 VA{I|L}{I|L}P 5 -1 20.433 0.0 0.0 1.2859 0.0 0.0 812.4998765331206 280.1305025690063 1092.6303791021269 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA{I|L}{I|L}P 1.2859 - 412 + 1 1.273 62677.0 1.0 10387 5634 16008 HBL1_DMSO_200M_050219_1,16023 HBL1_DMSO_200M_050219_1,16023,KHHRRKRRFRL False False LPPSVLAV 77.934239 795.498034656048 2525461.75 16008.0 ENSG00000186364|ENST00000334513|NUDT17 4.734840552012126 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16024 77.944 555.0 252580.0 25 0 17789.0 + 17788 KQIQELEEVL 10 171 614.8434609546629 1227.6723689761257 2 614.8431274294853 MULTI CID FTMS 0 0 0 16008 169177.796875 0.3454442390774591 -2 0.1706314086914062 16 Unmodified _KQIQELEEVL_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 96.36657018975838 0.0088773658760237 3 {[VA]|[{I|L}G]}AKQE{I|L}EEV{I|L} 11 4 + 97.234 0.0 0.0 7.9202 7.9202 82.949 0.0 0.0 0.0 1.1844991117610275 16.575773191777927 1.1844991117610275 1.1844991117610275 0 0.9247425010840048 0.8239087409443188 0.9361818737241734 2.190614065464281 {[VA]|[{I|L}G]}AKQE{I|L}EEV{I|L};{I|L}{I|L}DRE{I|L}EEV{I|L};[Q{I|L}]KQE{I|L}EEV{I|L};[AG]{I|L}KQE{I|L}EEV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}RE{I|L}EEV{I|L};{[TV]|[{I|L}S]}G{I|L}QQ{I|L}EEV{I|L};{[QN]|[E{I|L}]|[KN]}VRE{I|L}EEV{I|L};{[TV]|[{I|L}S]}AVQQ{I|L}EEV{I|L};{I|L}{I|L}GSQQ{I|L}EEV{I|L};{[VA]|[{I|L}G]}AKQEE{I|L}EV{I|L} 7.9202;7.8237;7.6879;7.6634;7.6594;7.3572;7.3428;7.2604;7.2242;7.1766 -;-;-;-;-;-;-;-;-;- 13140 1 1.273 106053.5 1.0 10388 5634 16008 HBL1_DMSO_200M_050219_1,16024 HBL1_DMSO_200M_050219_1,16024,KQIQELEEVL True True KQIQELEEVL 77.943995 614.843127429485 3543472.0 16008.0 ENSG00000116830|ENST00000369466|TTF2;;nc|ENSG00000116830|Q9UNY4-2|TTF2 5.445324897766113 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16025 77.955 574.0 140110.0 25 0 10430.0 + 17830 KQLDDLKVEL 10 143 600.8454667729441 0 600.8450195193291 PEAK CID FTMS 0 0 0 16008 159084.984375 0.6060158872765007 9 -0.8123245239257812 17 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 28.23362336080872 0.231954783421961 3 VK{I|L}Y 4 9 21.019 0.0 0.0 1.752 0.0 0.0 260.1402610831943 433.2032869928344 693.3435480760287 0.0 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.0 VK{I|L}Y 1.752 - 112 + 1 1.273 61795.3 1.0 10389 5634 16008 HBL1_DMSO_200M_050219_1,16025 HBL1_DMSO_200M_050219_1,16025,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16026 77.968 710.0 290270.0 25 0 15724.0 + 30711 RGFEGSFEEL 10 178 585.7754642544683 1169.5363755757364 2 585.7762939333916 MULTI CID FTMS 0 0 0 16008 136134.71875 0.2204764806449033 -2 0.1706314086914062 18 Unmodified _RGFEGSFEEL_ ENSG00000151726|ENST00000281455|ACSL1;ENST00000513001.5_1_4:185678281-185679089:-|nuORF;nc|ENSG00000151726|P33121-2|ACSL1;nc|ENSG00000151726|P33121-3|ACSL1 43.9818466556824 0.1155196613165264 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QT]GS{M(Oxidation (M))|F}EE{I|L} 10 4 + 66.149 0.0 0.0 5.656 5.656 74.525 0.0 0.0 0.0 0.0101417943382529 7.397398821326263 0.0101417943382529 0.0101417943382529 0 0.6382104921644451 0.958607314841775 0.805462187404089 0.3252574989159953 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QT]GS{M(Oxidation (M))|F}EE{I|L};{[QN]|[E{I|L}]|[KN]}E[YV]{M(Oxidation (M))|F}EE{I|L};[{M(Oxidation (M))|F}E]{[NV]|[RG]}GS{M(Oxidation (M))|F}EE{I|L};[Q{I|L}][{M(Oxidation (M))|F}T]GS{M(Oxidation (M))|F}EE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QT]GSE{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}E[YV]E{M(Oxidation (M))|F}E{I|L};[C(Carbamidomethyl (C))K]T{M(Oxidation (M))|F}SG[QT]E{I|L};[{M(Oxidation (M))|F}E][RN]S{M(Oxidation (M))|F}EE{I|L};[{M(Oxidation (M))|F}E]{[NV]|[RG]}GSE{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E{I|L} 5.656;5.6552;5.2443;5.0091;4.9225;4.9217;4.8944;4.6858;4.5109;4.3011 -;-;-;-;-;-;-;-;-;- 2514 1 1.273 155292.8 1.0 10390 5634 16008 HBL1_DMSO_200M_050219_1,16026 HBL1_DMSO_200M_050219_1,16026,RGFEGSFEEL True True RGFEGSFEEL 77.96758 585.776293933392 4322377.5 16008.0 ENST00000513001.5_1_4:185678281-185679089:-|nuORF;;ENSG00000151726|ENST00000281455|ACSL1;;nc|ENSG00000151726|P33121-2|ACSL1;;nc|ENSG00000151726|P33121-3|ACSL1 6.871735731760661 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16027 77.98 688.0 57572.0 25 0 4203.0 + 43899 YFVLFRYKFLF 11 92 771.9321166872978 0 771.9321166872978 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _YFVLFRYKFLF_ REV__ENST00000503787.5_1_5:54460591-54460681:+|nuORF 6.723162845929126 0.47618401536486 3 {I|L}{M(Oxidation (M))|F} 2 -1 9.464 0.0 0.0 0.6138 0.0 0.0 1019.5598377673706 259.10871301822505 1278.6685507855957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 0.6138 + + 16 + 1 1.273 36810.9 1.0 10391 5634 16008 HBL1_DMSO_200M_050219_1,16027 HBL1_DMSO_200M_050219_1,16027,YFVLFRYKFLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16028 77.993 702.0 131040.0 25 0 7065.3 -1 EMDETLMESL 10 168 607.2544433474541 0 607.2544433474541 PEAK CID FTMS 0 0 0 -1 0 20 Oxidation (M) _EMDETLM(Oxidation (M))ESL_ ENSG00000132915|ENST00000255266|PDE6A 6.2057823575117 0.3961065659209838 3 D 1 -1 7.7423 0.0 0.0 0.63854 0.0 0.0 399.11476940799554 695.3346651666624 1094.449434574658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D 0.63854 + + 100 + 1 1.273 73439.8 1.0 10392 5634 16008 HBL1_DMSO_200M_050219_1,16028 HBL1_DMSO_200M_050219_1,16028,EMDETLMESL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16030 77.997 15.0 5425400.0 25 0 959610.0 + 14103 IARVLTVI 8 73 442.7998189850632 883.5850850369264 2 442.8001281619072 MULTI CID FTMS 0 0 0 16029 2549073.0 0.1200183115672774 4 -0.3613510131835937 1 Unmodified _IARVLTVI_ ENSG00000136942|ENST00000348462|RPL35;ENST00000487431.1_1_9:127620199-127623861:-|nuORF 42.09456458481378 0.1992492688217789 3 [{I|L}A]RV{I|L}TV{I|L} 8 0 + 56.315 0.0 0.0 6.3734 6.3734 81.312 0.0 0.0 0.0 6.73967735365963 14.904630595263413 6.73967735365963 2.7422750325201406 0 0.5 0.958607314841775 0.4247425010840047 0.3494850021680094 + + [{I|L}A]RV{I|L}TV{I|L};[{I|L}A]RVT{I|L}V{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV{I|L};[{I|L}A]RTV{I|L}V{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}V{I|L};[{I|L}A]RV{I|L}S{I|L}{I|L};[{I|L}A]RVTV{I|L}{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S{I|L}{I|L};[{I|L}A]RTVV{I|L}{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}TV{I|L}{I|L} 6.3734;6.0631;5.6107;5.4683;5.3003;4.6455;4.3351;3.8827;3.7403;3.5723 +;-;-;-;-;-;-;-;-;- + 169 1 1.314 71322.7 1.0 10393 5635 16029 HBL1_DMSO_200M_050219_1,16030 HBL1_DMSO_200M_050219_1,16030,IARVLTVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16031 77.999 10.0 4968700.0 25 0 489520.0 15524 IPVLANFIV 9 74 493.30750595992856 984.6004589866571 2 493.3081237673759 MULTI CID FTMS 0 0 0 16029 3342947.5 0.2275386923949834 19 -1.728973388671875 2 Unmodified _IPVLANFIV_ ENSG00000146085|ENST00000274813|MMUT 21.74664581756881 0.2544899275067181 3 {I|L}P[KG]PAPVPG 10 7 51.592 0.0 0.0 5.2399 0.0 0.0 0.0 68.05137048892811 68.05137048892811 23.526909627198407 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P[KG]PAPVPG 5.2399 - 382 + 1 1.314 44867.1 1.0 10394 5635 16029 HBL1_DMSO_200M_050219_1,16031 HBL1_DMSO_200M_050219_1,16031,IPVLANFIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16032 78.0 18.0 3081200.0 25 0 848330.0 + 3283 AYHGLTVPL 9 72 485.77206504871015 969.5295771642204 2 485.7719604372978 MULTI CID FTMS 0 0 0 16029 2667404.0 0.8094732567191544 -1 0.1126251220703125 3 Unmodified _AYHGLTVPL_ ENSG00000113732|ENST00000519374|ATP6V0E1 26.34127834903884 0.1960301806784604 3 T{I|L}G[HC]{I|L} 6 7 21.497 0.0 0.0 2.2173 0.0 0.0 327.2191046073828 0.0 327.2191046073828 0.0 11.320010579541025 0.0 0.0 0 0.0 0.0 0.5 0.0 T{I|L}G[HC]{I|L} 2.2173 - 303 + 1 1.314 49872.7 1.0 10395 5635 16029 HBL1_DMSO_200M_050219_1,16032 HBL1_DMSO_200M_050219_1,16032,AYHGLTVPL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16033 78.001 21.0 1748300.0 25 0 428370.0 + 29166 QFVFRTRRR 9 51 633.3689732899979 1264.7233936467958 2 633.3696777224541 MULTI CID FTMS 0 0 0 16029 2032986.0 0.6274727066397517 -1 0.1126251220703125 4 Unmodified _QFVFRTRRR_ REV__ENSG00000172732|ENST00000308110|MUS81 0.5247636613948944 0.8963649302248013 3 D 1 -1 2.4743 0.0 0.0 0.19564 0.0 0.0 973.5848876426928 173.08204065494377 1146.6669282976366 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.19564 - 1 + 1 1.314 33161.6 1.0 10396 5635 16029 HBL1_DMSO_200M_050219_1,16033 HBL1_DMSO_200M_050219_1,16033,QFVFRTRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16034 78.002 28.0 2076700.0 25 0 406320.0 + 18195 KVAELFEKL 9 82 538.8213446286255 1075.628136324051 2 538.8216430544853 MULTI CID FTMS 0 0 0 16029 1810835.125 0.3413648002560752 2 -0.1775970458984375 5 Unmodified _KVAELFEKL_ ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF 59.17704102725264 0.0265377155841051 3 KVAE{I|L}{M(Oxidation (M))|F}EK{I|L} 9 0 + 94.313 0.0 0.0 8.7682 8.7682 90.276 0.0 0.0 0.0 28.027194418743804 5.361108642308892 5.361108642308892 5.361108642308892 0 2.4489700043360187 1.154901959985743 0.4247425010840047 0.3494850021680094 + + KVAE{I|L}{M(Oxidation (M))|F}EK{I|L};KVAE{I|L}{M(Oxidation (M))|F}E{I|L}K;{I|L}[KG]E{I|L}{M(Oxidation (M))|F}EK{I|L};{I|L}[KG]E{I|L}{M(Oxidation (M))|F}E{I|L}K;{[CP]|[EA]}VK{I|L}{M(Oxidation (M))|F}EK{I|L};{[CP]|[EA]}VK{I|L}{M(Oxidation (M))|F}TR{I|L};K[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}[RP]K{I|L};K[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}[RP]{I|L}K;{I|L}[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[RP]K{I|L};{[CP]|[EA]}VK{I|L}{M(Oxidation (M))|F}T[VG]{I|L} 8.7682;8.2697;5.139;4.6405;2.727;2.1684;2.1051;1.6066;1.3604;1.3124 +;-;-;-;-;-;-;-;-;- + 283 + 1 1.314 50408.4 1.0 10397 5635 16029 HBL1_DMSO_200M_050219_1,16034 HBL1_DMSO_200M_050219_1,16034,KVAELFEKL True True KVAELFEKL 78.002107 538.821643054485 89279782.25 16029.0 ENST00000490175.5_1_20:17923003-17949420:-|nuORF;;ENST00000547000.1_1_12:101462478-101462640:+|nuORF;;ENSG00000089006|ENST00000377759|SNX5 5.871373176574707 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16035 78.003 32.0 1145800.0 25 0 100150.0 35743 SVIDQIDKAV 10 80 544.3034382068003 0 544.3035766482353 PEAK CID FTMS 0 0 0 16029 1309687.625 0.5332289522809117 1 -0.1054611206054687 6 Unmodified _SVIDQIDKAV_ ENSG00000172426|ENST00000372163|RSPH9 20.453626601364224 0.2946171403104198 3 D{I|L} 2 8 8.9402 0.0 0.0 0.82277 0.0 0.0 672.3802090778598 183.07781397037343 855.4580230482333 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D{I|L} 0.82277 - 82 + 1 1.314 34723.1 1.0 10398 5635 16029 HBL1_DMSO_200M_050219_1,16035 HBL1_DMSO_200M_050219_1,16035,SVIDQIDKAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16036 78.005 51.0 1724700.0 25 0 320570.0 + 30628 RFLDKALEL 9 93 368.88531012925125 1103.6341009879538 3 368.8852722048759 MULTI CID FTMS 0 0 0 16029 1084531.5 0.5190344182329174 -1 0.1126251220703125 7 Unmodified _RFLDKALEL_ ENSG00000135069|ENST00000376588|PSAT1 32.78568957990786 0.1150597335874693 3 [R{M(Oxidation (M))|F}]{I|L}DKA{I|L}E{I|L} 9 0 + 45.538 0.0 0.0 4.1262 4.1262 69.736 0.0 0.0 0.0 9.386343361007263 30.05326554173664 9.386343361007263 0.1722032235195314 0 0.3182503180159344 0.0 0.5 0.3252574989159953 + + [R{M(Oxidation (M))|F}]{I|L}DKA{I|L}E{I|L};[R{M(Oxidation (M))|F}]{I|L}DKAE{I|L}{I|L} 4.1262;4.1106 +;- + 404 1 1.314 76877.0 1.0 10399 5635 16029 HBL1_DMSO_200M_050219_1,16036 HBL1_DMSO_200M_050219_1,16036,RFLDKALEL True True RFLDKALEL 78.004607 368.885272204876 63164900.0 16029.0 ENSG00000135069|ENST00000376588|PSAT1 5.287572860717773 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16037 78.006 43.0 1305500.0 25 0 93786.0 + 44532 YPEAITRLV 9 70 531.3029715831099 1060.5913902330196 2 531.3031494021416 MULTI CID FTMS 0 0 0 16029 863429.375 0.2782195409066526 -6 0.4531478881835937 8 Unmodified _YPEAITRLV_ ENSG00000173039|ENST00000406246|RELA;ENST00000525693.5_1_11:65421851-65422496:-|nuORF;ENST00000531484.5_1_11:65421851-65429483:-|nuORF;nc|ENSG00000173039|Q04206-2|RELA;nc|ENSG00000173039|Q04206-3|RELA;nc|ENSG00000173039|Q04206-4|RELA 29.84058131909904 0.1515068451768857 3 YPEA{I|L} 5 4 68.742 0.0 0.0 6.4815 0.0 0.0 0.0 484.289810033121 484.289810033121 38.5649218306807 0.0 0.0 0.0 0 1.2059771852360797 1.5228787452803376 0.3494850021680094 0.0 + YPEA{I|L} 6.4815 + + 94 + 1 1.314 50609.1 1.0 10400 5635 16029 HBL1_DMSO_200M_050219_1,16037 HBL1_DMSO_200M_050219_1,16037,YPEAITRLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16038 78.008 83.0 934400.0 25 0 102850.0 + 43810 YFADRLYDSM 10 86 640.784200987379 1279.553849041558 2 640.7844726443291 MULTI CID FTMS 0 0 0 16029 598316.0 0.8151916847358059 1 -0.1054611206054687 9 Unmodified _YFADRLYDSM_ ENSG00000182718|ENST00000451270|ANXA2;ENST00000560014.5_1_15:60639831-60644581:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2 49.74193281347159 0.0816655385645911 3 Y{M(Oxidation (M))|F}AD 4 6 39.993 0.0 0.0 3.1255 0.0 0.0 0.0 780.3354586236936 780.3354586236936 -3.895840698002999 0.0 -3.895840698002999 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 + Y{M(Oxidation (M))|F}AD 3.1255 + + 287 + 1 1.314 60035.4 1.0 10401 5635 16029 HBL1_DMSO_200M_050219_1,16038 HBL1_DMSO_200M_050219_1,16038,YFADRLYDSM True True YFADRLYDSM 78.007699 640.784472644329 6845841.0 16029.0 ENSG00000182718|ENST00000451270|ANXA2;;nc|ENSG00000182718|P07355-2|ANXA2;;ENST00000560014.5_1_15:60639831-60644581:-|nuORF 8.391236146291098 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16039 78.01 117.0 1021300.0 25 0 104580.0 + 1693 ALPHVVPTL 9 115 473.7895076622482 945.5644623912964 2 473.7898437380791 MULTI CID FTMS 0 0 0 16029 578259.1875 0.4846146714603577 -1 0.1126251220703125 10 Unmodified _ALPHVVPTL_ ENSG00000164818|ENST00000297440|DNAAF5;ENST00000491496.1_1_7:803580-810256:+|nuORF;nc|ENSG00000164818|Q86Y56-2|DNAAF5 86.12129899796855 0.0160336270647063 3 [{I|L}A]{M(Oxidation (M))|F}WVPT 7 4 52.317 0.0 0.0 5.5329 0.0 0.0 0.0 128.07210718326408 128.07210718326408 4.01818526217312 0.0 0.0 0.0 0 1.3494850021680094 1.6989700043360187 1.416386562212267 0.0 [{I|L}A]{M(Oxidation (M))|F}WVPT 5.5329 - 956 + 1 1.314 96199.8 1.0 10402 5635 16029 HBL1_DMSO_200M_050219_1,16039 HBL1_DMSO_200M_050219_1,16039,ALPHVVPTL True True ALPHVVPTL 78.010124 473.789843738079 9800681.0 16029.0 nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENSG00000164818|ENST00000297440|DNAAF5;;ENST00000491496.1_1_7:803580-810256:+|nuORF 5.9066268603007 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16040 78.012 108.0 886240.0 25 0 58405.0 17230 KLLKDLPEL 9 145 534.8371581273175 1067.6597633214349 2 534.8371459841728 MULTI CID FTMS 0 0 0 16029 473991.65625 0.3036472058640176 -3 0.2832565307617187 11 Unmodified _KLLKDLPEL_ ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4 41.34703777101937 0.0680619498902798 3 {I|L}{I|L}D{I|L}KPE{I|L} 8 3 57.846 0.0 0.0 5.418 0.0 0.0 128.09539992500157 0.0 128.09539992500157 0.0 39.38522701248628 0.0 0.0 0 1.7614393726401687 0.0 0.2887254899964357 0.0 {I|L}{I|L}D{I|L}KPE{I|L} 5.418 - 1273 1 1.314 78006.9 1.0 10403 5635 16029 HBL1_DMSO_200M_050219_1,16040 HBL1_DMSO_200M_050219_1,16040,KLLKDLPEL True True YGFLEVNKV 78.012415 534.837145984173 304484.03125 16029.0 ENST00000482338.5_1_20:34136370-34144126:+|nuORF;;nc|ENSG00000125991|Q9Y282-3|ERGIC3;;ENSG00000125991|ENST00000348547|ERGIC3;;nc|ENSG00000125991|Q9Y282-2|ERGIC3;;ENST00000489071.5_1_20:34135089-34136623:+|nuORF 2.079502741495768 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16041 78.014 53.0 1320000.0 25 0 161220.0 + 10197 FQGVEFHYV 9 102 563.2727595825263 1124.5309662318523 2 563.2728759646416 MULTI CID FTMS 0 0 0 16029 386305.53125 0.5715285877635381 -1 0.1126251220703125 12 Unmodified _FQGVEFHYV_ ENSG00000143815|ENST00000272163|LBR 36.04419817259434 0.0971720506436186 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RE{M(Oxidation (M))|F}HYV 8 2 + 22.432 0.0 0.0 1.9948 1.9948 71.047 0.0 0.0 0.0 3.2286017698518457 3.2286017698518457 3.2286017698518457 3.2286017698518457 0 0.5 0.0 0.3054621874040891 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RE{M(Oxidation (M))|F}HYV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RE{M(Oxidation (M))|F}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GVE{M(Oxidation (M))|F}HYV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GVE{M(Oxidation (M))|F}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RM{[WT]|[RM]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}H]|[RQ]}EKY{[HG]|PP}[HA];{[{M(Oxidation (M))|F}H]|[RQ]}EPQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HA];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[WT]|[RM]}MVG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AA{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R][EP];[EP]{[HG]|PP}Y[H{I|L}]C(Carbamidomethyl (C)){I|L} 1.9948;1.7077;1.4542;1.1719;0.97503;0.53829;0.4928;0.4344;0.30295;0.13784 -;-;+;-;-;-;-;-;-;- + 391 + 1 1.314 60068.0 1.0 10404 5635 16029 HBL1_DMSO_200M_050219_1,16041 HBL1_DMSO_200M_050219_1,16041,FQGVEFHYV True True FQGVEFHYV 78.013792 563.272875964642 5776821.5 16029.0 ENSG00000143815|ENST00000272163|LBR 4.492627700169881 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16042 78.017 152.0 809440.0 25 0 73673.0 + 28535 PTPHVDPTI 9 137 488.7595805755908 975.5046082179816 2 488.7595703005791 MULTI CID FTMS 0 0 0 16029 375508.46875 0.0823863346532036 5 -0.4580841064453125 13 Unmodified _PTPHVDPTI_ ENST00000476089.1_1_2:182321937-182323202:+|nuORF 36.04419817259434 0.0971720506436186 3 CPT{I|L} 4 6 32.572 0.0 0.0 3.339 0.0 0.0 543.3021678877066 0.0 543.3021678877066 0.0 -1.913473401617324 -1.913473401617324 0.0 0 0.5 0.0 0.6861818737241735 0.0 CPT{I|L} 3.339 - 709 + 1 1.314 96328.9 1.0 10405 5635 16029 HBL1_DMSO_200M_050219_1,16042 HBL1_DMSO_200M_050219_1,16042,PTPHVDPTI True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16043 78.019 114.0 919940.0 25 0 125470.0 + 7337 LAFESIQKI 9 124 524.3000221582583 1046.5854913833166 2 524.8068115115166 MULTI CID FTMS 0 0 0 16029 276188.6875 0.2056017129959451 -6 0.4531478881835937 14 Unmodified _EFRNIQKL_ nc|ENSG00000008838|O75448-2|MED24;ENSG00000008838|ENST00000394128|MED24 24.67388899826682 0.525179942228231 3 A{M(Oxidation (M))|F}ES{I|L}QK{I|L} 8 3 44.572 0.0 0.0 4.2588 0.0 0.0 112.06919299805608 0.0 112.06919299805608 0.0 21.885938418745457 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.6861818737241735 A{M(Oxidation (M))|F}ES{I|L}QK{I|L} 4.2588 - 872 + 1 1.314 86244.4 1.0 10406 5635 16029 HBL1_DMSO_200M_050219_1,16043 HBL1_DMSO_200M_050219_1,16043,EFRNIQKL False False LAFESIQKI 78.019201 524.806811511517 4698581.0 16029.0 nc|ENSG00000008838|O75448-2|MED24;;ENSG00000008838|ENST00000394128|MED24 4.9032332102457685 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16044 78.031 663.0 277640.0 25 0 14712.0 -1 LDPPNPNCYVC 11 198 674.7877188032612 1347.5608846733223 2 674.7876464724541 MULTI CID FTMS 0 0 0 16029 204240.15625 0.6367825924711639 -2 0.1728668212890625 15 2 Carbamidomethyl (C) _LDPPNPNC(Carbamidomethyl (C))YVC(Carbamidomethyl (C))_ ENSG00000126261|ENST00000246548|UBA2;nc|ENSG00000126261|Q9UBT2-2|UBA2 26.268140514670165 0.4754186812857754 3 YNYY[C(Carbamidomethyl (C))Q]{I|L}{I|L}[DP] 10 -1 + 71.661 0.0 0.0 5.3178 5.3178 76.633 0.0 0.0 0.0 29.043836045178782 1.843246711440188 1.843246711440188 1.843246711440188 0 0.8494850021680094 2.0 1.7302046884880935 0.0 YNYY[C(Carbamidomethyl (C))Q]{I|L}{I|L}[DP];YNYYP[{I|L}T][HD]Y;YNYY[C(Carbamidomethyl (C))Q]{I|L}V[EP];YNYY[C(Carbamidomethyl (C))Q]{I|L}EPV;YNYY[C(Carbamidomethyl (C))Q]{I|L}[DP]{I|L};YNYYP[YE]HS{I|L};YNYYP[YE]HTV;YNYYP[YE]{I|L}[HS];YNYYP[{I|L}T][DN]W;[YN]YCPYY{[TV]|[{I|L}S]}Y 5.3178;5.181;5.1649;5.0415;4.9416;4.6333;4.3073;4.2165;3.9825;3.6671 -;-;-;-;-;-;-;-;-;- 2324 + 1 1.314 134517.8 1.0 10407 5635 16029 HBL1_DMSO_200M_050219_1,16044 HBL1_DMSO_200M_050219_1,16044,LDPPNPNCYVC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16045 78.043 678.0 345410.0 25 0 67009.0 + 40112 VGLFIFITTWL 11 209 655.3822983569952 1308.7500437807903 2 655.3833495974541 MULTI CID FTMS 0 0 0 16029 208339.390625 0.1535216182857353 10 -0.8546676635742188 16 Unmodified _VGLFIFITTWL_ REV__ENSG00000185873|ENST00000332644|TMPRSS11B 3.2813086475875832 0.8596665074481906 3 [QP]ADC(Carbamidomethyl (C)) 5 -1 12.813 0.0 0.0 0.97906 0.0 0.0 0.0 734.5237003572153 734.5237003572153 2.2174800689569487 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0629529932484498 [QP]ADC(Carbamidomethyl (C)) 0.97906 - 478 1 1.314 186503.7 1.0 10408 5635 16029 HBL1_DMSO_200M_050219_1,16045 HBL1_DMSO_200M_050219_1,16045,VGLFIFITTWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16046 78.056 800.0 354410.0 25 0 26924.0 30700 RFQVILPPQPA 11 205 422.5818182954512 1264.7236254865536 3 422.5819579958916 MULTI CID FTMS 0 0 0 16029 194687.921875 0.5629293569463164 -1 0.1126251220703125 17 Unmodified _RFQVILPPQPA_ ENST00000372070.7_1_1:46016813-46018162:+|nuORF 8.745405648335112 0.8338865417133445 3 [R{M(Oxidation (M))|F}]{I|L}DKA{I|L} 7 8 28.593 0.0 0.0 2.2608 0.0 0.0 0.0 418.2023932661827 418.2023932661827 17.997278414192213 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.5 1.066901560044258 [R{M(Oxidation (M))|F}]{I|L}DKA{I|L} 2.2608 - 236 1 1.314 235334.9 0.7799999713897705 10409 5635 16029 HBL1_DMSO_200M_050219_1,16046 HBL1_DMSO_200M_050219_1,16046,RFQVILPPQPA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16047 78.069 751.0 249610.0 25 0 39556.0 + -1 DLCCYVFQCD 10 224 690.25488560537 1378.4952182775398 2 690.7609130740166 MULTI CID FTMS 0 0 0 16029 158229.421875 1.0 0 0.0 18 3 Carbamidomethyl (C) _DLC(Carbamidomethyl (C))C(Carbamidomethyl (C))YVFQC(Carbamidomethyl (C))D_ REV__ENST00000258884.4_2_15:81047866-81047941:+|nuORF 3.2813086475875832 0.7114585191678878 3 [YN]YD[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 10 -1 + 44.895 0.0 0.0 3.2568 3.2568 81.649 0.0 0.0 0.0 15.440680443502757 7.269987279362624 7.269987279362624 15.440680443502757 0 0.0 2.0 0.0 0.0 [YN]YD[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};YYND[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[YN]YD{[YD]|[{M(Oxidation (M))|F}M]}[HV]G{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[HD]T{M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]DYC(Carbamidomethyl (C))V;[HS]E{M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]DYC(Carbamidomethyl (C))V;[HD]T{M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]DYMQ;YYGGD[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[HD]TENYD[YC(Carbamidomethyl (C))]Y;[HS]E{M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]DYMQ;YYADS[C(Carbamidomethyl (C))H]ET{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 3.2568;2.1367;1.9943;1.8188;1.6004;1.5444;1.4718;1.4027;1.3261;1.1915 -;-;-;-;-;-;-;-;-;- 826 1 1.314 131939.8 1.0 10410 5635 16029 HBL1_DMSO_200M_050219_1,16047 HBL1_DMSO_200M_050219_1,16047,DLCCYVFQCD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16048 78.085 800.0 329530.0 25 0 34411.0 + 22278 LPRSPPEL 8 229 454.763402301539 907.512251669878 2 454.7632018923759 MULTI CID FTMS 0 0 0 16029 112659.796875 0.6321762679908107 -1 0.1126251220703125 19 Unmodified _LPRSPPEL_ REV__ENSG00000140471|ENST00000314742|LINS1;REV__ENST00000559169.1_1_15:101109445-101112292:-|nuORF 30.22481116460888 0.4082965392918993 3 [{I|L}P]K[YQ]{M(Oxidation (M))|F}{I|L} 7 -1 + 38.918 0.0 0.0 4.2884 4.2884 71.039 0.0 0.0 0.0 7.134475811582632 14.25205716106127 7.134475811582632 0.5799194697768684 0 0.8494850021680094 2.0 0.0 0.0 [{I|L}P]K[YQ]{M(Oxidation (M))|F}{I|L};[{I|L}P]P[QP]P{M(Oxidation (M))|F}{I|L};[VS]RRM{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}A[YK]P{M(Oxidation (M))|F}{I|L};[KP]{I|L}[YQ]{M(Oxidation (M))|F}{I|L};[K{I|L}][YQ]P{M(Oxidation (M))|F}{I|L};[Q{I|L}][YK]P{M(Oxidation (M))|F}{I|L};[K{I|L}]P[YQ]{M(Oxidation (M))|F}{I|L};{[HG]|PP}{I|L}[QP]P{M(Oxidation (M))|F}{I|L} 4.2884;4.2245;2.2896;1.8006;1.6461;1.3921;1.1313;1.0604;0.96919 -;-;-;-;-;-;-;-;- 1228 1 1.314 201078.3 0.6000000238418579 10411 5635 16029 HBL1_DMSO_200M_050219_1,16048 HBL1_DMSO_200M_050219_1,16048,LPRSPPEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16049 78.099 800.0 359370.0 25 0 13639.0 -1 0 165 1047.4742558734683 2092.933958813737 2 1047.981860339642 MULTI CID FTMS 0 0 0 16029 103347.46875 0.2112044562472854 -1 0.1126251220703125 20 3 {[DA]|[EG]}TAA[Y{M(Oxidation (M))|F}]YY{I|L}ATDAA{[DS]|[MA]|[CV]|TT}[HQ] 19 -1 + 89.152 0.0 0.0 4.2597 4.2597 77.043 0.0 0.0 0.0 6.154720025589 13.9035529686697 6.154720025589 4.503187623076968 0 0.2742275032520141 1.3010299956639813 1.4406140654642814 0.0 {[DA]|[EG]}TAA[Y{M(Oxidation (M))|F}]YY{I|L}ATDAA{[DS]|[MA]|[CV]|TT}[HQ];{[DA]|[EG]}ATA[Y{M(Oxidation (M))|F}]YY{I|L}ATDAA{[DS]|[MA]|[CV]|TT}[HK];{[DA]|[EG]}TAA[Y{M(Oxidation (M))|F}]YY{I|L}ATDA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[HQ];{[DA]|[EG]}TAA[Y{M(Oxidation (M))|F}]YY{I|L}ATWA{[DS]|[MA]|[CV]|TT}[HQ];{[TV]|[{I|L}S]}AADT{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]P{I|L}ATDAA{[DS]|[MA]|[CV]|TT}[HQ];{[DA]|[EG]}TAVT{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]P{I|L}ATDAA{[DS]|[MA]|[CV]|TT}[HQ];[TA]DAA[Y{M(Oxidation (M))|F}]YY{I|L}ATDAA{[DS]|[MA]|[CV]|TT}[HK];{[DA]|[EG]}ATA[Y{M(Oxidation (M))|F}]YY{I|L}ATWA{[DS]|[MA]|[CV]|TT}[HK];{[DA]|[EG]}ATA[Y{M(Oxidation (M))|F}]YY{I|L}ATDA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[HK];{[DA]|[EG]}TAA[Y{M(Oxidation (M))|F}]YY{I|L}ATW{[WS]|[C(Carbamidomethyl (C)){I|L}]}[HQ] 4.2597;4.0445;3.9369;3.9369;3.8662;3.83;3.7762;3.7218;3.7218;3.6148 -;-;-;-;-;-;-;-;-;- 129731 1 1.314 176791.5 0.5799999833106995 10412 5635 16029 HBL1_DMSO_200M_050219_1,16049 HBL1_DMSO_200M_050219_1,16049, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16051 78.103 11.0 6358900.0 25 0 605300.0 + 26734 NYYPYTITEY 10 75 663.7979489068186 1325.5813448804372 2 663.7985717654228 MULTI CID FTMS 0 0 0 16050 5471600.0 1.0 0 0.0 1 Unmodified _NYYPYTITEY_ ENSG00000154217|ENST00000581322|PITPNC1;nc|ENSG00000154217|Q9UKF7-2|PITPNC1 43.85829265575387 0.1168243637355526 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}T 5 5 29.697 0.0 0.0 2.2403 0.0 0.0 0.0 747.2628994060809 747.2628994060809 2.6460010360564468 0.0 0.0 0.0 0 0.0 1.154901959985743 1.424742501084005 0.0 + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}T 2.2403 + + 324 1 1.338 56449.3 1.0 10413 5636 16050 HBL1_DMSO_200M_050219_1,16051 HBL1_DMSO_200M_050219_1,16051,NYYPYTITEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16052 78.104 21.0 1619300.0 25 0 174230.0 9346 FILMTWTVLK 10 61 626.3609505499721 1250.7073481667442 2 626.3617431521416 MULTI CID FTMS 0 0 0 16050 2855203.5 0.8975545190142253 2 -0.1908798217773437 2 Unmodified _FILMTWTVLK_ L1MC3_dup7320|chrX:70161794-70162664:+|1.112392509996284|0.2551508396873335|2.12|48.0|58|3|anti-sense 6.723162845929126 0.6955379296933136 3 R{[QN]|[E{I|L}]|[KN]} 3 9 2.0514 0.0 0.0 0.16402 0.0 0.0 834.4478399653755 0.0 834.4478399653755 0.0 0.0616686753686241 0.0 0.0 0 0.0 0.0 0.0 0.0 R{[QN]|[E{I|L}]|[KN]} 0.16402 - 17 + 1 1.338 30828.0 1.0 10414 5636 16050 HBL1_DMSO_200M_050219_1,16052 HBL1_DMSO_200M_050219_1,16052,FILMTWTVLK False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 16053 78.105 24.0 2908500.0 25 0 245550.0 + 3324 AYLPVNESF 9 99 520.2595274668881 1038.5045020005762 2 520.2588378787041 MULTI CID FTMS 0 0 0 16050 2575284.25 1.0 0 0.0 3 Unmodified _AYLPVNESF_ ENSG00000167658|ENST00000309311|EEF2 37.97399986684836 0.0865783450051559 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[{I|L}T]{M(Oxidation (M))|F}S 7 5 45.295 0.0 0.0 4.3616 0.0 0.0 0.0 240.0627535455688 240.0627535455688 -0.6837284479933459 0.0 -0.6837284479933459 0.0 0 0.7742275032520141 2.0 1.110924374808178 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[{I|L}T]{M(Oxidation (M))|F}S 4.3616 - 298 + 1 1.338 58854.0 1.0 10415 5636 16050 HBL1_DMSO_200M_050219_1,16053 HBL1_DMSO_200M_050219_1,16053,AYLPVNESF True True AYLPVNESF 78.105211 520.258837878704 18067660.0 16050.0 ENSG00000167658|ENST00000309311|EEF2 4.259462038675944 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16054 78.106 23.0 3383200.0 25 0 535090.0 12489 GVAVKELDLYL 11 70 610.3484104945563 1218.6822680559126 2 610.3488036990166 MULTI CID FTMS 0 0 0 16050 2351315.5 0.8627384251797757 2 -0.1908798217773437 4 Unmodified _GVAVKELDLYL_ ENSG00000141905|ENST00000443272|NFIC;nc|ENSG00000141905|P08651-2|NFIC;nc|ENSG00000141905|P08651-3|NFIC;nc|ENSG00000141905|P08651-4|NFIC;nc|ENSG00000141905|P08651-5|NFIC;nc|ENSG00000141905|P08651-6|NFIC 3.2813086475875832 0.8596665074481906 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 11 1 1.338 61982.6 1.0 10416 5636 16050 HBL1_DMSO_200M_050219_1,16054 HBL1_DMSO_200M_050219_1,16054,GVAVKELDLYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16055 78.108 42.0 2277000.0 25 0 365710.0 + 2985 AVIGDVIRV 9 81 471.2925295917672 940.5705062503343 2 471.2928954958916 MULTI CID FTMS 0 0 0 16050 1470343.25 0.1132095087338455 -3 0.2783279418945312 5 Unmodified _AVIGDVIRV_ ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21 34.40172386719151 0.1061884637610825 3 {[VA]|[{I|L}G]}{I|L}GDV{I|L}RV 9 0 + 71.786 0.0 0.0 7.6322 7.6322 89.547 0.0 0.0 0.0 27.147642715192504 11.217335967330882 11.217335967330882 6.505149978319906 0 0.7742275032520141 2.0 0.0 0.3494850021680094 + + {[VA]|[{I|L}G]}{I|L}GDV{I|L}RV;{[VA]|[{I|L}G]}VADV{I|L}RV;{[VA]|[{I|L}G]}{I|L}GDV[RV]{I|L};{[VA]|[{I|L}G]}VADV[RV]{I|L};{[VA]|[{I|L}G]}{I|L}V[DG]{I|L}RV;{[VA]|[{I|L}G]}V{I|L}[DG]{I|L}RV;{[VA]|[{I|L}G]}{I|L}V[DG][RV]{I|L};{[VA]|[{I|L}G]}V{I|L}[DG][RV]{I|L} 7.6322;6.9406;6.4396;5.7479;5.7187;5.027;4.526;3.8344 +;-;-;-;-;-;-;- + 211 + 1 1.338 76279.5 1.0 10417 5636 16050 HBL1_DMSO_200M_050219_1,16055 HBL1_DMSO_200M_050219_1,16055,AVIGDVIRV True True AVIGDVIRV 78.107569 471.292895495892 322875432.0 16050.0 nc|ENSG00000165732|Q9NR30-2|DDX21;;ENSG00000165732|ENST00000354185|DDX21 5.181011994679769 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16056 78.109 46.0 2007300.0 25 0 175190.0 + 41861 VPYPLPKI 8 90 463.7892037353869 925.563854537574 2 463.7893859744072 MULTI CID FTMS 0 0 0 16050 1262402.25 0.2507066752022763 -5 0.4622039794921875 6 Unmodified _VPYPLPKI_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1 53.57557251787612 0.1224291679108181 3 VPYP{I|L}PK{I|L} 8 0 + 73.173 0.0 0.0 7.9058 7.9058 95.983 0.0 0.0 0.0 24.97527127701269 10.388276068576587 10.388276068576587 20.79689690656103 0 1.1549471895720984 1.3979400086720375 0.0 0.0 + + VPYP{I|L}PK{I|L};V{I|L}{M(Oxidation (M))|F}P{I|L}PK{I|L};V{I|L}AT{[QG]|[NA]}PK{I|L} 7.9058;5.6588;2.4082 +;-;- + 222 + 1 1.338 75374.8 1.0 10418 5636 16050 HBL1_DMSO_200M_050219_1,16056 HBL1_DMSO_200M_050219_1,16056,VPYPLPKI True True VPYPLPKI 78.108811 463.789385974407 320994624.0 16050.0 nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;;nc|ENSG00000141279|P55786-2|NPEPPS;;nc|ENSG00000274487|A6NEC2|NPEPPSL1;;ENSG00000141279|ENST00000322157|NPEPPS;;ENST00000602788.5_1_17:45660176-45669919:+|nuORF 6.00905704498291 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16057 78.11 50.0 1339300.0 25 0 132770.0 + 34242 SLPSRPSFLIA 11 88 594.342714454846 1186.670875976492 2 594.3437988162041 MULTI CID FTMS 0 0 0 16050 1264745.75 0.3726632777447601 4 -0.3526229858398437 7 Unmodified _SLPSRPSFLIA_ REV__ENST00000372718.7_1_1:40887788-40887878:+|nuORF 17.11289562659939 0.6791789249425932 3 VV{M(Oxidation (M))|F} 3 -1 34.705 0.0 0.0 2.9246 0.0 0.0 0.0 838.4439009513112 838.4439009513112 11.986214092293828 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VV{M(Oxidation (M))|F} 2.9246 - 155 + 1 1.338 57018.0 1.0 10419 5636 16050 HBL1_DMSO_200M_050219_1,16057 HBL1_DMSO_200M_050219_1,16057,SLPSRPSFLIA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16058 78.111 27.0 1915500.0 25 0 326430.0 16240 IVPDEIEEI 9 76 528.7762121360009 0 528.7768432497978 PEAK CID FTMS 0 0 0 16050 975942.375 1.0 0 0.0 8 Unmodified _IVPDEIEEI_ ENSG00000171723|ENST00000478722|GPHN;nc|ENSG00000171723|Q9NQX3|GPHN 12.531546534597751 0.2832320739326029 3 {I|L}WT{I|L}T 5 7 16.198 0.0 0.0 1.5346 0.0 0.0 201.1071790990109 237.0525301568969 438.15970925590784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}WT{I|L}T 1.5346 - 222 + 1 1.338 46885.0 1.0 10420 5636 16050 HBL1_DMSO_200M_050219_1,16058 HBL1_DMSO_200M_050219_1,16058,IVPDEIEEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16059 78.113 75.0 1312500.0 25 0 180930.0 + 21700 LPLRVPGL 8 83 432.7867198579895 863.5588867827789 2 432.7868835330009 MULTI CID FTMS 0 0 0 16050 793102.125 0.9706170671374308 -11 0.7536163330078125 9 Unmodified _LPLRVPGL_ REV__ENSG00000171714|ENST00000324559|ANO5 20.871210003555333 0.6025813472596342 3 {I|L}P 2 -1 44.222 0.0 0.0 5.1209 0.0 0.0 0.0 650.4004248752286 650.4004248752286 22.25895023531386 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {I|L}P 5.1209 + + 71 + 1 1.338 80393.5 1.0 10421 5636 16050 HBL1_DMSO_200M_050219_1,16059 HBL1_DMSO_200M_050219_1,16059,LPLRVPGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16060 78.115 88.0 818580.0 25 0 107480.0 + 22421 LPTFVRSI 8 92 466.7813250399784 931.5480971467568 2 466.7819091677666 MULTI CID FTMS 0 0 0 16050 694298.25 1.0 0 0.0 10 Unmodified _LPTFVRSI_ ENSG00000156515|ENST00000359426|HK1;ENST00000494253.1_1_10:71098016-71144300:+|nuORF;nc|ENSG00000156515|P19367-2|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156515|P19367-4|HK1 27.628801355627647 0.4629596117395134 3 {I|L}PT{M(Oxidation (M))|F}V 5 3 59.385 0.0 0.0 6.3749 0.0 0.0 0.0 371.2057283990844 371.2057283990844 44.52028618440272 0.0 0.0 0.0 0 0.5941876774005248 1.6989700043360187 0.0 0.0 + {I|L}PT{M(Oxidation (M))|F}V 6.3749 + + 149 + 1 1.338 58539.4 1.0 10422 5636 16050 HBL1_DMSO_200M_050219_1,16060 HBL1_DMSO_200M_050219_1,16060,LPTFVRSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16061 78.117 112.0 1205100.0 25 0 150920.0 + 32258 RWPDYVREL 9 108 411.88404851646834 1232.630316149605 3 411.8839904665947 MULTI CID FTMS 0 0 0 16050 565597.5625 0.2124972925827192 20 -1.7363052368164062 11 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 49.55428908609986 0.0413471690215031 3 [WR]PDY 5 4 43.133 0.0 0.0 3.4993 0.0 0.0 0.0 512.285680014046 512.285680014046 30.672626582051578 0.0 0.0 0.0 0 1.3182503180159344 1.5228787452803376 0.3807196863200844 0.5941876774005248 + [WR]PDY 3.4993 + + 241 1 1.338 110105.3 1.0 10423 5636 16050 HBL1_DMSO_200M_050219_1,16061 HBL1_DMSO_200M_050219_1,16061,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16062 78.119 71.0 1154300.0 25 0 135410.0 + 3061 AVLNALDKI 9 106 478.79208964615935 955.5696263591188 2 478.7922241091728 MULTI CID FTMS 0 0 0 16050 543948.375 0.5523829169017669 -2 0.2180862426757812 12 Unmodified _AVLNALDKI_ ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1 47.74868867922204 0.0453060283459952 3 {[VA]|[{I|L}G]}{I|L}NA{I|L}DK{I|L} 9 0 + 60.217 0.0 0.0 6.3017 6.3017 82.319 0.0 0.0 0.0 28.38066039450018 12.98332479720628 12.98332479720628 3.3274830476035646 0 0.6237125054200234 2.0 0.6989700043360187 0.2887254899964357 + + {[VA]|[{I|L}G]}{I|L}NA{I|L}DK{I|L};{[VA]|[{I|L}G]}VQA{I|L}DK{I|L};{[VA]|[{I|L}G]}{I|L}GGA{I|L}DK{I|L};{[VA]|[{I|L}G]}{I|L}NA{I|L}[TA]A{I|L};{[VA]|[{I|L}G]}{I|L}[C(Carbamidomethyl (C))R]PK{I|L};{[VA]|[{I|L}G]}V[AG]A{I|L}DK{I|L};{[VA]|[{I|L}G]}VQA{I|L}[TA]A{I|L};{[VA]|[{I|L}G]}V[KC][RP]A{I|L};[R{I|L}][KC]V{I|L}[QP];[R{I|L}][KC]{I|L}V[QP] 6.3017;5.9534;5.338;5.1059;4.9991;4.9898;4.7577;3.0837;0.70113;0.28469 +;-;-;-;-;-;-;-;-;- + 1872 + 1 1.338 67603.2 1.0 10424 5636 16050 HBL1_DMSO_200M_050219_1,16062 HBL1_DMSO_200M_050219_1,16062,AVLNALDKI True True AVLNALDKI 78.119011 478.792224109173 8693775.0 16050.0 nc|ENSG00000160783|Q6P1K2-6|PMF1;;nc|ENSG00000160783|Q6P1K2-2|PMF1;;ENSG00000160783|ENST00000368277|PMF1;;nc|ENSG00000160783|Q6P1K2-4|PMF1;;nc|ENSG00000160783|Q6P1K2-5|PMF1;;nc|ENSG00000160783|Q6P1K2-3|PMF1 -0.0649920304616292 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16063 78.121 61.0 997020.0 25 0 133540.0 + 29450 QLIDIIHTA 9 101 512.294762147139 1022.574971361078 2 512.2957641482353 MULTI CID FTMS 0 0 0 16050 535063.375 0.5066039483206826 2 -0.1908798217773437 13 Unmodified _QLIDIIHTA_ ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 54.773552608820026 0.0299037012502309 3 [Q{I|L}]{I|L}D{I|L}{I|L}H[TA] 9 0 + 59.949 0.0 0.0 5.8626 5.8626 91.132 0.0 0.0 0.0 39.23570318966085 7.3316559547312465 7.3316559547312465 36.43175948177209 0 0.3054621874040891 1.6989700043360187 1.960409376976188 0.0 + + [Q{I|L}]{I|L}D{I|L}{I|L}H[TA];[Q{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}R[Y{I|L}]{I|L};[Q{I|L}]{I|L}[{M(Oxidation (M))|F}V][HA]PV;[Q{I|L}][{M(Oxidation (M))|F}V]{I|L}[HA]PV;[{I|L}T][HA]{I|L}D{I|L}[Q{I|L}];[HT]A{I|L}{I|L}D{I|L}[Q{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[TA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[TA]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}D{I|L}[HA]PV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[TA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV 5.8626;2.2998;2.136;1.5473;1.5153;1.0073;0.29117;0.29117;0.19319;0.091556 +;-;-;-;-;-;-;-;-;- + 307 + 1 1.338 54124.5 1.0 10425 5636 16050 HBL1_DMSO_200M_050219_1,16063 HBL1_DMSO_200M_050219_1,16063,QLIDIIHTA True True QLIDIIHTA 78.120534 512.295764148235 8938142.0 16050.0 ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 4.8036088943481445 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16064 78.129 500.0 367000.0 25 0 25213.0 -1 0 136 994.4471506849866 1986.879748436773 2 994.9509765505792 MULTI CID FTMS 0 0 0 16050 449898.46875 1.0 0 0.0 14 3 [YQ]{I|L}ENY[WE]NE{I|L} 11 -1 46.869 0.0 0.0 2.3589 0.0 0.0 0.0 502.2303085237242 502.2303085237242 -2.249717649948792 0.0 -2.249717649948792 0.0 0 0.0 1.0969100130080565 0.0 1.7931576817365436 [YQ]{I|L}ENY[WE]NE{I|L} 2.3589 - 4038 1 1.338 126532.3 1.0 10426 5636 16050 HBL1_DMSO_200M_050219_1,16064 HBL1_DMSO_200M_050219_1,16064, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16065 78.133 175.0 594800.0 25 0 46302.0 + 36537 TAIPVAVNL 9 135 449.2721684250781 896.5297839169563 2 449.2736694216728 MULTI CID FTMS 0 0 0 16050 339882.0625 1.0 0 0.0 15 Unmodified _TAIPVAVNL_ REV__ENSG00000158292|ENST00000377893|GPR153 28.486842064014134 0.1687311288560894 3 [{I|L}P]ATVD 6 -1 36.955 0.0 0.0 4.122 0.0 0.0 0.0 297.18436090353754 297.18436090353754 12.00659450546418 0.0 0.0 0.0 0 0.0 1.154901959985743 1.0 0.0 [{I|L}P]ATVD 4.122 - 481 1 1.338 82705.0 1.0 10427 5636 16050 HBL1_DMSO_200M_050219_1,16065 HBL1_DMSO_200M_050219_1,16065,TAIPVAVNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16066 78.135 132.0 676620.0 25 0 68049.0 22444 LPTSICKGV 9 132 459.25896922010753 916.5033855070152 2 459.2589294314384 MULTI CID FTMS 0 0 0 16050 315494.25 1.0 0 0.0 16 Unmodified _LPTSICKGV_ ENST00000426094.5_1_16:278330-278429:-|nuORF;ENST00000428363.1_2_16:277301-278506:-|nuORF;ENST00000435096.1_1_7:139044701-139059229:+|nuORF;ENST00000490762.5_1_16:278330-279338:-|nuORF 13.50788311687929 0.4710407108020397 3 KGV 3 6 15.01 0.0 0.0 1.6378 0.0 0.0 614.3079031845526 0.0 614.3079031845526 0.0 1.8765315847925024 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 + KGV 1.6378 + + 262 + 1 1.338 71224.0 1.0 10428 5636 16050 HBL1_DMSO_200M_050219_1,16066 HBL1_DMSO_200M_050219_1,16066,LPTSICKGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16067 78.141 312.0 281800.0 25 0 17514.0 + 28682 PVPTQTKPLSL 11 144 590.8482621041803 1179.6819712751603 2 590.8483764529228 MULTI CID FTMS 0 0 0 16050 277240.40625 0.1701898710962786 13 -1.0969924926757812 17 Unmodified _PVPTQTKPLSL_ REV__ENST00000482143.5_1_1:46649328-46650297:+|nuORF;REV__ENST00000482928.5_1_1:46646779-46650297:+|nuORF 8.745405648335112 0.8338865417133445 3 [PS]NRRKAK 8 -1 14.965 0.0 0.0 1.2686 0.0 0.0 0.0 239.10408960513908 239.10408960513908 1.865964123719445 0.0 0.0 0.0 0 0.7117581349478641 0.721246399047171 0.0 0.0 [PS]NRRKAK 1.2686 - 378 + 1 1.338 70531.7 1.0 10429 5636 16050 HBL1_DMSO_200M_050219_1,16067 HBL1_DMSO_200M_050219_1,16067,PVPTQTKPLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16068 78.152 645.0 402050.0 25 0 28248.0 19403 LESLILKYIDL 11 204 660.3952510562563 0 660.3956176638603 PEAK CID FTMS 0 0 0 16050 297220.0625 1.0 0 0.0 18 Unmodified _LESLILKYIDL_ ENSG00000215251|ENST00000380266|FASTKD5 34.40172386719151 0.1843838221482756 3 {I|L}S{I|L}ND 5 7 36.758 0.0 0.0 2.7873 0.0 0.0 677.4016338490375 96.08249078922108 773.4841246382585 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0743923658886183 1.2689301784845295 {I|L}S{I|L}ND 2.7873 - 908 + 1 1.338 185812.1 1.0 10430 5636 16050 HBL1_DMSO_200M_050219_1,16068 HBL1_DMSO_200M_050219_1,16068,LESLILKYIDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16069 78.159 345.0 253360.0 25 0 27187.0 + 19064 LDQGWCASCY 10 147 573.2247304112697 1144.4349078893392 2 573.2250854372978 MULTI CID FTMS 0 0 0 16050 268976.6875 1.0 0 0.0 19 Unmodified _LDQGWCASCY_ REV__ENST00000466179.2_1_3:49133464-49136021:-|nuORF 5.296884461304476 0.7021353017287152 3 {NN|[MP]|[D{I|L}]|[EV]}K 3 -1 16.299 0.0 0.0 1.4242 0.0 0.0 0.0 785.2057263309986 785.2057263309986 4.158781176037888 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}K 1.4242 - 375 1 1.338 72900.9 1.0 10431 5636 16050 HBL1_DMSO_200M_050219_1,16069 HBL1_DMSO_200M_050219_1,16069,LDQGWCASCY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16070 78.17 677.0 136830.0 25 0 14835.0 -1 0 101 996.4763354908064 2986.4071770726187 3 996.8119384646416 MULTI CID FTMS 0 0 0 16050 225902.125 1.0 0 0.0 20 3 [MN]P 3 -1 26.963 0.0 0.0 0.90285 0.0 0.0 0.0 2641.248338531856 2641.248338531856 10.543680009900882 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [MN]P 0.90285 - 925 1 1.338 67810.9 1.0 10432 5636 16050 HBL1_DMSO_200M_050219_1,16070 HBL1_DMSO_200M_050219_1,16070, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16072 78.175 14.0 3883400.0 25 0 302980.0 + 18653 LAGVRFSLEI 10 83 552.8235629199165 1103.632572906633 2 552.8243286013603 MULTI CID FTMS 0 0 0 16071 3103849.75 0.4488870561982024 1 -0.118743896484375 1 Unmodified _LAGVRFSLEI_ ENST00000254770.2_1_7:55433273-55433429:+|nuORF 43.77239144664712 0.1177314611616471 3 {I|L}{M(Oxidation (M))|F}{I|L}AK{[SA]|[TG]}{I|L}E{I|L} 10 5 + 54.167 0.0 0.0 4.9081 4.9081 86.431 0.0 0.0 0.0 42.16026214303007 12.01667520279372 12.01667520279372 16.079634678231464 0 0.3807196863200844 0.0 1.3807196863200843 0.0 {I|L}{M(Oxidation (M))|F}{I|L}AK{[SA]|[TG]}{I|L}E{I|L};{I|L}{M(Oxidation (M))|F}RRSA{I|L}E{I|L} 4.9081;3.4511 -;- 160 + 1 1.379 47962.5 1.0 10433 5637 16071 HBL1_DMSO_200M_050219_1,16072 HBL1_DMSO_200M_050219_1,16072,LAGVRFSLEI True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16073 78.176 23.0 2718200.0 25 0 193360.0 + 13618 HPPSHWPLI 9 100 542.2903820269429 1082.5662111206857 2 542.2914306521416 MULTI CID FTMS 0 0 0 16071 1760553.75 0.1453333567224428 -10 0.73492431640625 2 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 67.34385681178166 0.0221257235307089 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L} 9 2 + 51.212 0.0 0.0 4.7306 4.7306 72.857 0.0 0.0 0.0 0.5090746888058106 18.235972821117755 0.5090746888058106 0.8460550734051111 0 1.674742501084005 0.0 0.6382104921644451 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPPH{I|L}{I|L};[{I|L}P]C{NN|[MP]|[D{I|L}]|[EV]}{[CP]|[EA]}P{I|L}{I|L};[WH][PS]PHP{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]PHP{I|L}{I|L} 4.7306;4.6524;4.4415;4.1634;3.9125;3.3787;3.1007;3.0805;2.8497;2.8497 -;-;-;-;-;-;-;-;-;- 612 1 1.379 57472.3 1.0 10434 5637 16071 HBL1_DMSO_200M_050219_1,16073 HBL1_DMSO_200M_050219_1,16073,HPPSHWPLI True True HPPSHWPLI 78.176164 542.291430652142 302352120.0 16071.0 ENSG00000168036|ENST00000349496|CTNNB1 7.518361568450928 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16074 78.177 49.0 1612400.0 25 0 328240.0 + 32249 RWPDYVREL 9 74 617.3225132351072 1232.6304735370145 2 617.3252441287041 MULTI CID FTMS 0 0 0 16071 569361.0625 0.1083071115120223 21 -1.834877014160156 3 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 42.312485326615175 0.0627620958981271 3 [WR][DP]YVRE{I|L} 9 0 + 60.881 0.0 0.0 4.9391 4.9391 88.513 0.0 0.0 0.0 9.729524540212324 42.92219661254123 9.729524540212324 60.88099678598198 0 1.0 1.3010299956639813 0.0 1.1549471895720984 + + [WR][DP]YVRE{I|L} 4.9391 + + 87 1 1.379 65199.5 1.0 10435 5637 16071 HBL1_DMSO_200M_050219_1,16074 HBL1_DMSO_200M_050219_1,16074,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16075 78.18 102.0 732800.0 25 0 131300.0 23663 LTRRKDNI 8 123 508.30395405602974 1014.5933551788596 2 508.8039428591728 MULTI CID FTMS 0 0 0 16071 438908.0 0.8050246636334353 -1 0.0721359252929687 4 Unmodified _LTRRKDNI_ ENST00000282488.11_1_3:152180196-152180370:+|nuORF 14.581692164780916 0.6954967302934248 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KQRN{I|L} 8 5 + 31.292 0.0 0.0 3.0842 3.0842 70.413 0.0 0.0 0.0 6.989700043360188 7.403626894942441 6.989700043360188 1.972353285392636 0 0.242992819099939 0.0 0.0 0.4247425010840047 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KQRN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VK{[QG]|[NA]}N{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KV{[QG]|[NA]}N{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KQRQV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}QRN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VK{[QG]|[NA]}QV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KT{I|L}E[PA];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KQRGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KV{[QG]|[NA]}QV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}V{[QG]|[NA]}N{I|L} 3.0842;2.8898;2.4195;2.3544;2.3172;2.16;1.7865;1.7526;1.6898;1.6525 -;-;-;-;-;-;-;-;-;- 787 + 1 1.379 61702.2 1.0 10436 5637 16071 HBL1_DMSO_200M_050219_1,16075 HBL1_DMSO_200M_050219_1,16075,LTRRKDNI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16076 78.182 125.0 1321300.0 25 0 57828.0 + 12382 GTIDEIQKLHI 11 149 422.9061454617735 1265.6966069855205 3 422.9055358767509 MULTI CID FTMS 0 0 0 16071 405508.0 0.1022468845415279 -2 0.1775970458984375 5 Unmodified _GTIDEIQKLHI_ ENSG00000167986|ENST00000301764|DDB1 51.76506608216692 0.1078551230621665 3 {[SA]|[TG]}{I|L}DE{I|L}QK{I|L}H{I|L} 11 0 + 92.81 0.0 0.0 7.3327 7.3327 90.931 0.0 0.0 0.0 44.7425014798594 12.35028299170665 12.35028299170665 9.128498242811006 0 0.3807196863200844 2.0 0.8494850021680094 0.4247425010840047 + + {[SA]|[TG]}{I|L}DE{I|L}QK{I|L}H{I|L};{[SA]|[TG]}{I|L}DE{I|L}[AG]K{I|L}H{I|L};{[SA]|[TG]}{I|L}DRRW{I|L}H{I|L};{[SA]|[TG]}{I|L}{I|L}[WQ]W{I|L}H{I|L};{[SA]|[TG]}K[RP]{[C(Carbamidomethyl (C))G]|[NC]}K{I|L}H{I|L};{[SA]|[TG]}{I|L}{I|L}[WK]P{[DS]|[MA]|[CV]|TT}H{I|L};{[SA]|[TG]}K[RP]K{[C(Carbamidomethyl (C))G]|[NC]}{I|L}H{I|L};{[SA]|[TG]}KPSPRRD[RP];{[SA]|[TG]}K[RP]KQ{[DS]|[MA]|[CV]|TT}H{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{I|L}P[WK]{I|L}[RP] 7.3327;6.6115;4.584;3.6962;3.224;3.0563;2.5563;2.3759;2.2322;2.1563 +;-;-;-;-;-;-;-;-;- + 2195 + 1 1.379 149185.5 1.0 10437 5637 16071 HBL1_DMSO_200M_050219_1,16076 HBL1_DMSO_200M_050219_1,16076,GTIDEIQKLHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16077 78.186 220.0 428180.0 25 0 32587.0 -1 YNYCFSTCLGH 11 114 682.7720081874127 0 682.7719604372978 PEAK CID FTMS 0 0 0 16071 393291.75 1.0 0 0.0 6 Carbamidomethyl (C) _YNYC(Carbamidomethyl (C))FSTCLGH_ ENSG00000009413|ENST00000368802|REV3L;nc|ENSG00000009413|O60673-2|REV3L 15.248480904072842 0.4017935032673427 3 E{M(Oxidation (M))|F} 2 -1 15.217 0.0 0.0 1.116 0.0 0.0 163.06393761791566 921.3455142253732 1084.409451843289 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E{M(Oxidation (M))|F} 1.116 - 42 + 1 1.379 73750.6 1.0 10438 5637 16071 HBL1_DMSO_200M_050219_1,16077 HBL1_DMSO_200M_050219_1,16077,YNYCFSTCLGH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16078 78.195 509.0 494730.0 25 0 84058.0 14659 IINIIMPLAER 11 208 641.8822122364909 1281.7498715397817 2 641.8826782107353 MULTI CID FTMS 0 0 0 16071 363624.625 0.2116409942262473 6 -0.5221023559570312 7 Unmodified _IINIIMPLAER_ ENST00000332270.6_1_X:100211671-100211914:+|nuORF 2.735195868890462 0.8622431031272658 3 {I|L} 1 10 9.2082 0.0 0.0 0.71841 0.0 0.0 1150.6550209311863 0.0 1150.6550209311863 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.71841 + + 278 + 1 1.379 189782.3 1.0 10439 5637 16071 HBL1_DMSO_200M_050219_1,16078 HBL1_DMSO_200M_050219_1,16078,IINIIMPLAER False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16079 78.197 79.0 711760.0 25 0 75240.0 + 2291 AQIDHYLGL 9 101 515.2718087584489 1028.5290645836976 2 515.2714721560478 MULTI CID FTMS 0 0 0 16071 352509.875 0.0366042997061561 -4 0.3504638671875 8 Unmodified _AQIDHYLGL_ ENSG00000115310|ENST00000337526|RTN4;ENST00000485749.1_1_2:55200294-55201100:-|nuORF;nc|ENSG00000115310|Q9NQC3-2|RTN4;nc|ENSG00000115310|Q9NQC3-3|RTN4;nc|ENSG00000115310|Q9NQC3-4|RTN4;nc|ENSG00000115310|Q9NQC3-5|RTN4;nc|ENSG00000115310|Q9NQC3-6|RTN4 25.399314129420983 0.2080152500878129 3 [HD]{I|L}Y{I|L}G 6 5 23.901 0.0 0.0 2.3238 0.0 0.0 0.0 327.17029409709284 327.17029409709284 -2.4041489987210056 0.0 -2.4041489987210056 0.0 0 0.0 0.0 0.0 0.0 [HD]{I|L}Y{I|L}G 2.3238 - 307 1 1.379 49922.1 1.0 10440 5637 16071 HBL1_DMSO_200M_050219_1,16079 HBL1_DMSO_200M_050219_1,16079,AQIDHYLGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16080 78.207 568.0 489170.0 25 0 41577.0 + 35953 SVPNKDVFQEL 11 203 638.3325191712581 1274.6504854093162 2 638.3330566287041 MULTI CID FTMS 0 0 0 16071 300378.34375 0.0824590840383569 -4 0.3504638671875 9 Unmodified _SVPNKDVFQEL_ ENSG00000115919|ENST00000264170|KYNU 70.92866715596459 0.0297132693151486 3 [VS]PYQ{M(Oxidation (M))|F}VDK 9 7 96.113 0.0 0.0 7.5403 0.0 0.0 0.0 208.0728548639281 208.0728548639281 25.056584229283857 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.2312958898387063 1.73239816956497 [VS]PYQ{M(Oxidation (M))|F}VDK 7.5403 - 18780 + 1 1.379 201853.5 1.0 10441 5637 16071 HBL1_DMSO_200M_050219_1,16080 HBL1_DMSO_200M_050219_1,16080,SVPNKDVFQEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16081 78.21 152.0 732120.0 25 0 98995.0 + 21974 LPPNVQII 8 111 447.2760754538383 892.5375979744765 2 447.2763854861259 MULTI CID FTMS 0 0 0 16071 260789.125 0.3249067765681427 12 -1.0248565673828125 10 Unmodified _LPPNVQII_ ENSG00000100099|ENST00000398145|HPS4;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000496385.5_1_22:26849136-26861668:-|nuORF;nc|ENSG00000100099|Q9NQG7-2|HPS4;nc|ENSG00000100099|Q9NQG7-3|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4 42.96799951952854 0.1846367511955703 3 [{I|L}P][NP]VQ{I|L}{I|L} 8 0 + 35.291 0.0 0.0 3.954 3.954 75.037 0.0 0.0 0.0 3.5239136374265456 3.099396087305521 3.099396087305521 3.5239136374265456 0 0.7429928190999391 0.958607314841775 0.0 0.7059771852360797 + + [{I|L}P][NP]VQ{I|L}{I|L};[NP]P{I|L}VQ{I|L}{I|L};[{I|L}P][NP]N{I|L}{I|L}{I|L};[{I|L}P][NP]V[AG]{I|L}{I|L};[NP]P{I|L}N{I|L}{I|L}{I|L};[NP]PV{I|L}Q{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}Q{I|L}{I|L};[NP]P{I|L}V[AG]{I|L}{I|L};[NP]VP{I|L}Q{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}Q{I|L}{I|L}{I|L} 3.954;3.5591;3.2523;2.9162;2.8574;2.776;2.5579;2.5214;2.3924;2.2206 +;-;-;-;-;-;-;-;-;- + 194 1 1.379 89276.5 1.0 10442 5637 16071 HBL1_DMSO_200M_050219_1,16081 HBL1_DMSO_200M_050219_1,16081,LPPNVQII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16082 78.222 665.0 495070.0 25 0 39400.0 + 23594 LTPFTAATVTV 11 229 560.8165828692896 1119.6186128053791 2 560.8164550662041 MULTI CID FTMS 0 0 0 16071 261314.03125 0.5889892617504501 -2 0.1775970458984375 11 Unmodified _LTPFTAATVTV_ REV__ENST00000558381.1_1_14:24648738-24648993:+|nuORF 47.74868867922204 0.1300977870992118 3 [{I|L}T]PY{I|L}NTVTV 10 -1 + 69.87 0.0 0.0 6.2405 6.2405 85.427 0.0 0.0 0.0 6.302112417116064 19.916892907146178 6.302112417116064 6.302112417116064 0 0.7742275032520141 1.0969100130080565 1.024227503252014 0.25 [{I|L}T]PY{I|L}NTVTV;[{I|L}P]TY{I|L}NTVTV;[Y{I|L}][TP]{I|L}NTVTV;[{I|L}T]PY{I|L}GGTVTV;[{I|L}P]TY{I|L}GGTVTV;{[TV]|[{I|L}S]}P{I|L}[YQ]TVTV;[{I|L}T]PV[YQ]TVTV;[{I|L}T]PY{I|L}A[SG]VTV;[Y{I|L}][KG]A{I|L}YPPV;{[TV]|[{I|L}S]}QSK{[SA]|[TG]}TVTV 6.2405;5.6776;5.2407;5.1987;4.6358;4.6068;4.5658;4.2587;4.1168;4.0699 -;-;-;-;-;-;-;-;-;- 12039 1 1.379 250535.1 1.0 10443 5637 16071 HBL1_DMSO_200M_050219_1,16082 HBL1_DMSO_200M_050219_1,16082,LTPFTAATVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16083 78.223 68.0 220680.0 25 0 26173.0 -1 LRHWFCIT 8 42 566.790784638343 1131.567016343486 2 566.7900268435478 MULTI CID FTMS 0 0 0 16071 265241.4375 0.1537083184020657 -4 0.3504638671875 12 Carbamidomethyl (C) _LRHWFC(Carbamidomethyl (C))IT_ ENST00000354618.9_1_1:36752496-36752550:+|nuORF 2.302733041254933 0.8103549651115762 3 {I|L}K 2 -1 6.4537 0.0 0.0 0.57033 0.0 0.0 551.2077156616484 336.1566561334594 887.3643717951079 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}K 0.57033 - 9 + 1 1.379 19735.2 1.0 10444 5637 16071 HBL1_DMSO_200M_050219_1,16083 HBL1_DMSO_200M_050219_1,16083,LRHWFCIT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16084 78.235 684.0 657430.0 25 0 66431.0 -1 LSKLVNSLYP 10 281 588.3355207439473 1174.6564885546943 2 588.3358642458916 MULTI CID FTMS 0 0 0 16071 205064.484375 0.0870146757675198 -4 0.3504638671875 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSKLVNSLYP_ ENSG00000149591|ENST00000392951|TAGLN;ENST00000533863.1_2_11:117074025-117074655:+|nuORF 12.240655878213236 0.6421556946785427 3 {[QN]|[E{I|L}]|[KN]}K{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}YP 8 -1 32.441 0.0 0.0 2.7617 0.0 0.0 0.0 110.10397061756876 110.10397061756876 21.020843157823865 0.0 0.0 0.0 0 0.0 1.154901959985743 0.1344005005252609 0.6694451763165201 {[QN]|[E{I|L}]|[KN]}K{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}YP 2.7617 - 4270 1 1.379 328239.6 1.0 10445 5637 16071 HBL1_DMSO_200M_050219_1,16084 HBL1_DMSO_200M_050219_1,16084,LSKLVNSLYP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16085 78.241 253.0 529320.0 25 0 54902.0 + -1 AVGARATMSL 10 164 496.7623068136208 991.5100606940416 2 496.7598144412041 MULTI CID FTMS 0 0 0 16071 220700.140625 0.026326749299246 12 -1.0248565673828125 14 Oxidation (M) _AVGARATM(Oxidation (M))SL_ REV__ENSG00000131914|ENST00000326279|LIN28A 16.942295170755138 0.5632667538960775 3 P{I|L}KG{I|L} 5 -1 16.631 0.0 0.0 1.6773 0.0 0.0 465.1608918481416 0.0 465.1608918481416 0.0 3.0847423910674934 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}KG{I|L} 1.6773 - 746 + 1 1.379 102532.4 1.0 10446 5637 16071 HBL1_DMSO_200M_050219_1,16085 HBL1_DMSO_200M_050219_1,16085,AVGARATMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16086 78.244 144.0 338730.0 25 0 19857.0 + 11677 GLEKLVLYGTA 11 99 582.3351836576426 1162.655814382085 2 582.3351928591728 MULTI CID FTMS 0 0 0 16071 180399.78125 0.0791341560254163 12 -1.0248565673828125 15 Unmodified _GLEKLVLYGTA_ REV__ENSG00000088305|ENST00000328111|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-2|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-3|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-4|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-5|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-6|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-7|DNMT3B;REV__nc|ENSG00000088305|Q9UBC3-8|DNMT3B 4.5288652416199255 0.8537804541365391 3 {NN|[MP]|[D{I|L}]|[EV]}A 3 -1 11.477 0.0 0.0 0.98716 0.0 0.0 0.0 860.4848603628069 860.4848603628069 0.218175894310308 0.0 0.0 0.0 0 0.3807196863200844 1.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}A 0.98716 - 30 1 1.379 46243.5 1.0 10447 5637 16071 HBL1_DMSO_200M_050219_1,16086 HBL1_DMSO_200M_050219_1,16086,GLEKLVLYGTA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16087 78.258 800.0 179470.0 25 0 30684.0 + 16414 IYVFLIWLSVT 11 187 677.3950840275277 1352.7756151218553 2 677.3953735232353 MULTI CID FTMS 0 0 0 16071 161308.046875 0.192929261329637 -4 0.3504638671875 16 Unmodified _IYVFLIWLSVT_ REV__ENSG00000204178|ENST00000374343|MACO1;REV__ENST00000470035.1_1_1:25780757-25784897:+|nuORF;REV__nc|ENSG00000204178|Q8N5G2-3|MACO1 3.2813086475875832 0.8596665074481906 3 {I|L} 1 -1 10.596 0.0 0.0 0.78327 0.0 0.0 1221.6806424429474 0.0 1221.6806424429474 0.0 1.6165319518756682 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.78327 + + 198 + 1 1.379 116001.0 0.9200000166893004 10448 5637 16071 HBL1_DMSO_200M_050219_1,16087 HBL1_DMSO_200M_050219_1,16087,IYVFLIWLSVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16088 78.262 216.0 208820.0 25 0 22742.0 40842 VLNLTHNQLR 10 79 604.3483448405694 1206.6821367479388 2 604.3494750857353 MULTI CID FTMS 0 0 0 16071 140654.0625 0.0616043551028251 -4 0.3504638671875 17 Unmodified _VLNLTHNQLR_ ENSG00000164342|ENST00000296795|TLR3 3.944395688203298 0.708391353636983 3 [{I|L}V]N 3 7 16.911 0.0 0.0 1.4015 0.0 0.0 0.0 877.4647960099106 877.4647960099106 7.307131330965721 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 + [{I|L}V]N 1.4015 + + 20 1 1.379 37341.4 1.0 10449 5637 16071 HBL1_DMSO_200M_050219_1,16088 HBL1_DMSO_200M_050219_1,16088,VLNLTHNQLR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16089 78.267 247.0 453360.0 25 0 47457.0 + 39453 VAPLATVNI 9 122 449.2721684250781 896.5297839169563 2 449.7044555544853 MULTI CID FTMS 0 0 0 16071 63492.75390625 0.3139382430616674 1 -0.118743896484375 18 Unmodified _VAPLATVNI_ ENSG00000164896|ENST00000297532|FASTK;ENST00000460980.5_1_7:150774852-150777853:-|nuORF;ENST00000466855.1_1_7:150774852-150776190:-|nuORF;ENST00000467237.5_1_7:150774601-150776190:-|nuORF;ENST00000478477.1_1_7:150774852-150776634:-|nuORF;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;nc|ENSG00000164896|Q14296-4|FASTK 19.438996006549623 0.310492472477042 3 N{I|L} 2 7 19.196 0.0 0.0 2.1411 0.0 0.0 651.3920103347282 0.0 651.3920103347282 0.0 8.711375162600703 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + N{I|L} 2.1411 + + 350 + 1 1.379 88966.1 1.0 10450 5637 16071 HBL1_DMSO_200M_050219_1,16089 HBL1_DMSO_200M_050219_1,16089,VAPLATVNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16090 78.274 433.0 315580.0 25 0 39880.0 + 16188 IVGFVLAL 8 177 416.2705509744676 830.5265490157352 2 416.2707702517509 MULTI CID FTMS 0 0 0 16071 118441.4609375 0.0090737817091012 17 -1.5513763427734375 19 Unmodified _IVGFVLAL_ REV__ENST00000406434.5_1_2:16804274-16804388:-|nuORF 24.20995872069341 0.5349487244130675 3 [{I|L}V]P 3 -1 30.062 0.0 0.0 3.6196 0.0 0.0 0.0 518.2984713190061 518.2984713190061 7.843181179205061 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}V]P 3.6196 - 302 + 1 1.379 110381.5 1.0 10451 5637 16071 HBL1_DMSO_200M_050219_1,16090 HBL1_DMSO_200M_050219_1,16090,IVGFVLAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16091 78.289 800.0 186220.0 25 0 39852.0 -1 0 80 1140.119724872514 3417.3373452177425 3 1140.789111316204 MULTI CID FTMS 0 0 0 16071 103570.859375 0.5677777526518426 1 -0.118743896484375 20 3 TTWTC(Carbamidomethyl (C)) 5 -1 25.635 0.0 0.0 0.75014 0.0 0.0 2355.8590774349013 409.2093599908813 2765.0684374257826 0.0 0.0 0.0 0.0 0 0.0 0.0 1.110924374808178 0.0 TTWTC(Carbamidomethyl (C)) 0.75014 - 511 + 1 1.379 123427.5 0.6499999761581421 10452 5637 16071 HBL1_DMSO_200M_050219_1,16091 HBL1_DMSO_200M_050219_1,16091, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16093 78.294 12.0 4402600.0 25 0 480060.0 + 40162 VGPAVLALFV 10 69 493.30750595992856 984.6004589866571 2 493.3081848025322 MULTI CID FTMS 0 0 0 16092 3941033.25 0.2682475726556136 22 -1.9145965576171875 1 Unmodified _VGPAVLALFV_ REV__ENSG00000117322|ENST00000367057|CR2;REV__nc|ENSG00000117322|P20023-2|CR2;REV__nc|ENSG00000117322|P20023-4|CR2;REV__nc|ENSG00000117322|P20023|CR2 24.67388899826682 0.4143206957119831 3 [{I|L}P]NV[{I|L}A]{I|L}{M(Oxidation (M))|F}V 9 -1 + 50.06 0.0 0.0 5.0843 5.0843 84.623 0.0 0.0 0.0 6.348200093054714 17.715299873086607 6.348200093054714 9.208187539523747 0 0.9247425010840048 2.0 0.0 0.0 [{I|L}P]NV[{I|L}A]{I|L}{M(Oxidation (M))|F}V;[{I|L}P]GGV[{I|L}A]{I|L}{M(Oxidation (M))|F}V;[KP]V[VS]P{I|L}{M(Oxidation (M))|F}V;[KP]PV[VS]{I|L}{M(Oxidation (M))|F}V;[KP]PT[{I|L}A]{I|L}{M(Oxidation (M))|F}V;[KP]VP[VS]{I|L}{M(Oxidation (M))|F}V;[KP]V[VS]{M(Oxidation (M))|F}[{I|L}P]V;[KP]V[RV][C(Carbamidomethyl (C))K]V 5.0843;4.149;3.3872;2.9558;2.8289;2.4712;1.5864;0.19137 -;-;-;-;-;-;-;- 246 1 1.407 46300.7 1.0 10453 5638 16092 HBL1_DMSO_200M_050219_1,16093 HBL1_DMSO_200M_050219_1,16093,VGPAVLALFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16094 78.295 16.0 1778900.0 25 0 255700.0 + 43482 WVRWKIQLH 9 52 633.3689732899979 1264.7233936467958 2 633.3697387576103 MULTI CID FTMS 0 0 0 16092 1701788.0 0.5252498160277788 2 -0.1617431640625 2 Unmodified _WVRWKIQLH_ REV__ENST00000351223.7_1_1:46049867-46067967:+|nuORF 2.059750862983233 0.8427793054688888 3 DE{I|L}Q[K{I|L}][H{I|L}] 8 -1 19.385 0.0 0.0 1.5328 0.0 0.0 270.17618301375404 0.0 270.17618301375404 0.0 13.69911285071794 0.0 0.0 0 0.0 0.0 0.0 0.0 DE{I|L}Q[K{I|L}][H{I|L}] 1.5328 - 42 + 1 1.407 26804.2 1.0 10454 5638 16092 HBL1_DMSO_200M_050219_1,16094 HBL1_DMSO_200M_050219_1,16094,WVRWKIQLH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16095 78.296 39.0 1846400.0 25 0 139630.0 + 17231 KLLKDLPEL 9 103 534.8371581273175 1067.6597633214349 2 534.8371459841728 MULTI CID FTMS 0 0 0 16092 1560994.625 1.0 0 0.0 3 Unmodified _KLLKDLPEL_ ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4 66.68293810318366 0.0223819955243495 3 K{I|L}{I|L}DK{I|L}PE{I|L} 9 2 + 64.267 0.0 0.0 6.0195 6.0195 79.889 0.0 0.0 0.0 41.0235909396512 3.9728862735798094 3.9728862735798094 2.4875335888954595 0 2.778659694992122 0.0 1.110924374808178 0.0 K{I|L}{I|L}DK{I|L}PE{I|L};{[TV]|[{I|L}S]}[VG]{I|L}{I|L}KPE{I|L};[K{I|L}]D{I|L}{I|L}KPE{I|L};[K{I|L}]{I|L}D{I|L}KPE{I|L};{[TV]|[{I|L}S]}[VG]{I|L}{I|L}KEP{I|L};[K{I|L}]D{I|L}{I|L}KEP{I|L};[K{I|L}]{I|L}D{I|L}KEP{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}V]KKPE{I|L};[K{I|L}]{I|L}KD{I|L}PE{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}V]KKEP{I|L} 6.0195;5.7865;5.7177;5.5528;5.0692;5.0004;4.8355;4.1473;3.726;3.4299 -;-;-;-;-;-;-;-;+;- + 455 + 1 1.407 59571.6 1.0 10455 5638 16092 HBL1_DMSO_200M_050219_1,16095 HBL1_DMSO_200M_050219_1,16095,KLLKDLPEL True True KLLKDLPEL 78.296087 534.837145984173 44141096.0 16092.0 ENST00000489049.5_1_10:112647518-112650449:+|nuORF;;nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 1.6537281076113384 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16096 78.297 29.0 892850.0 25 0 74699.0 + 44533 YPEAITRLV 9 45 531.3029715831099 1060.5913902330196 2 531.3033935427666 MULTI CID FTMS 0 0 0 16092 1522743.75 0.4906678870445826 -3 0.2963409423828125 4 Unmodified _YPEAITRLV_ ENSG00000173039|ENST00000406246|RELA;ENST00000525693.5_1_11:65421851-65422496:-|nuORF;ENST00000531484.5_1_11:65421851-65429483:-|nuORF;nc|ENSG00000173039|Q04206-2|RELA;nc|ENSG00000173039|Q04206-3|RELA;nc|ENSG00000173039|Q04206-4|RELA 15.248480904072842 0.4239247793462406 3 YPEA{I|L} 5 4 58.756 0.0 0.0 5.5399 0.0 0.0 0.0 484.28916345767817 484.28916345767817 33.06933472159166 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + YPEA{I|L} 5.5399 + + 25 + 1 1.407 26753.1 1.0 10456 5638 16092 HBL1_DMSO_200M_050219_1,16096 HBL1_DMSO_200M_050219_1,16096,YPEAITRLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16097 78.299 85.0 855030.0 25 0 144610.0 33514 SILARLVL 8 93 442.7998189850632 883.5850850369264 2 442.8001281619072 MULTI CID FTMS 0 0 0 16092 976219.1875 0.045963445771592 7 -0.5583267211914062 5 Unmodified _SILARLVL_ AluSg_dup36345|chr22:39033812-39034106:-|1.7183411907320236|0.3290854125150665|2.38|48.0|14|1|anti-sense 42.09456458481378 0.1992492688217789 3 [{I|L}A]RV{I|L}TV{I|L} 8 4 + 49.941 0.0 0.0 5.652 5.652 76.831 0.0 0.0 0.0 1.34698573897456 14.904630595263413 1.34698573897456 1.34698573897456 0 0.9247425010840048 0.0 0.7742275032520141 0.0 [{I|L}A]RV{I|L}TV{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV{I|L};[{I|L}A]RVT{I|L}V{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}V{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GKK;[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K[KG] 5.652;5.4996;5.3417;5.1892;1.5961;1.2554 -;-;-;-;-;- 153 1 1.407 62470.0 1.0 10457 5638 16092 HBL1_DMSO_200M_050219_1,16097 HBL1_DMSO_200M_050219_1,16097,SILARLVL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 16098 78.3 43.0 834140.0 25 0 107480.0 + 3068 AVLTQIDQI 9 67 500.7876160500608 999.5606791669215 2 500.7873412966728 MULTI CID FTMS 0 0 0 16092 802741.3125 0.6140132789696551 -3 0.2963409423828125 6 Unmodified _AVLTQIDQI_ ENSG00000071539|ENST00000166345|TRIP13;ENST00000512024.5_1_5:893053-908577:+|nuORF 16.942295170755138 0.3780752226737986 3 {[VA]|[{I|L}G]}AT 4 6 26.783 0.0 0.0 2.6795 0.0 0.0 0.0 654.3470920910029 654.3470920910029 9.87166639801799 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {[VA]|[{I|L}G]}AT 2.6795 - 171 1 1.407 33677.4 1.0 10458 5638 16092 HBL1_DMSO_200M_050219_1,16098 HBL1_DMSO_200M_050219_1,16098,AVLTQIDQI False True AVLTQIDQI 78.300362 500.787341296673 10987960.0 16092.0 ENST00000512024.5_1_5:893053-908577:+|nuORF;;ENSG00000071539|ENST00000166345|TRIP13 2.0814392069975534 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16099 78.302 46.0 1458400.0 25 0 137750.0 + 34499 SMTLAIHEI 9 110 507.7682244620824 1013.5218959909648 2 507.7689697146416 MULTI CID FTMS 0 0 0 16092 691448.6875 1.0 0 0.0 7 Unmodified _SMTLAIHEI_ ENSG00000143753|ENST00000323699|DEGS1 61.357469665136826 0.0253304979873734 3 {[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A{I|L}HE{I|L} 9 0 + 77.968 0.0 0.0 7.6928 7.6928 93.703 0.0 0.0 0.0 43.354032540302285 25.65205445200208 25.65205445200208 10.48455006504028 0 0.8807196863200843 1.6989700043360187 1.274227503252014 0.0 + + {[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A{I|L}HE{I|L};{[MS]|[{M(Oxidation (M))|F}A]}TA{I|L}{I|L}HE{I|L};[TA][QP]{I|L}A{I|L}T{[CP]|[EA]};[{I|L}T]A[QP]A{I|L}T{[CP]|[EA]};[VP][NS]{I|L}A{I|L}T{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[QP]APV;{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[QP][PG]{I|L};AAP{[SA]|[TG]}{I|L}A{I|L}T{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}TA{I|L}{I|L}[QP][PG];[TA]{I|L}[QP]A{I|L}T{[CP]|[EA]} 7.6928;6.6583;4.6555;4.5829;4.3948;4.2401;4.1677;4.1096;3.796;3.704 +;-;-;-;-;-;-;-;-;- + 404 + 1 1.407 55972.7 1.0 10459 5638 16092 HBL1_DMSO_200M_050219_1,16099 HBL1_DMSO_200M_050219_1,16099,SMTLAIHEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16100 78.303 43.0 1287100.0 25 0 162590.0 + 45748 YYIQNGIQSF 10 81 616.8010376525909 0 616.8009521365166 PEAK CID FTMS 0 0 0 16092 665935.75 0.8696151663242335 -1 0.118743896484375 8 Unmodified _YYIQNGIQSF_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 15.847184025352805 0.3304572136216667 3 WG 2 9 9.464 0.0 0.0 0.76844 0.0 0.0 155.06261533816183 830.3943575494749 985.4569728876368 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WG 0.76844 - 68 + 1 1.407 46769.0 1.0 10460 5638 16092 HBL1_DMSO_200M_050219_1,16100 HBL1_DMSO_200M_050219_1,16100,YYIQNGIQSF False True YYIQNGIQSF 78.302839 616.800952136517 7347100.0 16092.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 3.480438709259033 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16101 78.305 93.0 836690.0 25 0 103540.0 + 13863 HVIQALESL 9 108 505.2880838962687 1008.5616148593374 2 505.2879211306572 MULTI CID FTMS 0 0 0 16092 635690.875 0.4780394873278143 2 -0.1617431640625 9 Unmodified _HVIQALESL_ ENSG00000117505|ENST00000370272|DR1 46.020951573049366 0.0490941689151868 3 [HV]{I|L}QA{I|L}ES{I|L} 9 0 + 63.254 0.0 0.0 6.2717 6.2717 90.305 0.0 0.0 0.0 19.62189282359297 38.71645960868548 19.62189282359297 12.703037561203844 0 1.1677353201839438 1.3979400086720375 0.0 0.3494850021680094 + + [HV]{I|L}QA{I|L}ES{I|L};[HV]{I|L}[AG]A{I|L}ES{I|L};[HV]A{[VA]|[{I|L}G]}A{I|L}ES{I|L};[HV]{I|L}Q[DV]VS{I|L};[HV]A[Q{I|L}]{I|L}ES{I|L};[HV]{I|L}[AG][DV]VS{I|L};[{I|L}A][RH]A{I|L}ES{I|L};[Q{I|L}][HV]A{I|L}ES{I|L};[{I|L}A]Y{I|L}ARR{M(Oxidation (M))|F};[HV]A{[VA]|[{I|L}G]}[DV]VS{I|L} 6.2717;5.0122;4.4527;4.0661;3.8051;3.1531;3.1492;3.0265;2.959;2.5936 +;-;-;-;-;-;-;-;-;- + 239 1 1.407 63068.5 1.0 10461 5638 16092 HBL1_DMSO_200M_050219_1,16101 HBL1_DMSO_200M_050219_1,16101,HVIQALESL True True HVIQALESL 78.304876 505.287921130657 9060162.0 16092.0 ENSG00000117505|ENST00000370272|DR1 4.879830042521159 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16102 78.306 54.0 830820.0 25 0 87882.0 + 10457 FTHSQFIVV 9 86 539.2901481789592 1076.5657434247182 2 539.2903320193291 MULTI CID FTMS 0 0 0 16092 585473.0 0.5666629423757423 -3 0.2963409423828125 10 Unmodified _FTHSQFIVV_ ENSG00000136824|ENST00000374793|SMC2 30.63653989081413 0.1413794767160703 3 [{I|L}T]EEQ{M(Oxidation (M))|F}{I|L}VV 9 3 + 40.398 0.0 0.0 3.7525 3.7525 68.606 0.0 0.0 0.0 0.0539503188670664 0.584683239754753 0.0539503188670664 0.0539503188670664 0 0.718765315847925 0.0 0.7302046884880937 0.3054621874040891 [{I|L}T]EEQ{M(Oxidation (M))|F}{I|L}VV;[{I|L}P]{[{M(Oxidation (M))|F}D]|MM}Q{M(Oxidation (M))|F}{I|L}VV;[{I|L}T]EEQ{I|L}{M(Oxidation (M))|F}VV;[{I|L}P]{[{M(Oxidation (M))|F}D]|MM}Q{I|L}{M(Oxidation (M))|F}VV;[{I|L}T]EE[AG]{M(Oxidation (M))|F}{I|L}VV;[{I|L}P]{[{M(Oxidation (M))|F}D]|MM}[AG]{M(Oxidation (M))|F}{I|L}VV;[{I|L}T]EE[AG]{I|L}{M(Oxidation (M))|F}VV;[{I|L}P]{[{M(Oxidation (M))|F}D]|MM}[AG]{I|L}{M(Oxidation (M))|F}VV 3.7525;3.7474;2.9846;2.9796;2.6134;2.6084;1.8456;1.8406 -;-;-;-;-;-;-;- 131 1 1.407 44553.0 1.0 10462 5638 16092 HBL1_DMSO_200M_050219_1,16102 HBL1_DMSO_200M_050219_1,16102,FTHSQFIVV False True FTHSQFIVV 78.306278 539.290332019329 18901864.0 16092.0 ENSG00000136824|ENST00000374793|SMC2 3.7869696617126474 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16103 78.309 128.0 716930.0 25 0 123860.0 + 30629 RFLDKALEL 9 103 368.88531012925125 1103.6341009879538 3 368.8852722048759 MULTI CID FTMS 0 0 0 16092 553636.5 0.264959015657921 2 -0.1617431640625 11 Unmodified _RFLDKALEL_ ENSG00000135069|ENST00000376588|PSAT1 26.268140514670165 0.1969607489560049 3 [R{M(Oxidation (M))|F}]{I|L}DKAE{I|L}{I|L} 9 2 + 38.929 0.0 0.0 3.5274 3.5274 71.412 0.0 0.0 0.0 2.6768055231068715 21.939483872201265 2.6768055231068715 2.0289375146764854 0 0.3182503180159344 0.0 0.9247425010840048 0.2396518287104437 [R{M(Oxidation (M))|F}]{I|L}DKAE{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}DKA{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AK[KA][NS]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AK[W{I|L}][DV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AKY[PG][VP] 3.5274;3.3435;1.3449;0.8056;0.31109 -;+;-;-;- + 292 1 1.407 78751.2 1.0 10463 5638 16092 HBL1_DMSO_200M_050219_1,16103 HBL1_DMSO_200M_050219_1,16103,RFLDKALEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16104 78.311 95.0 459780.0 25 0 27883.0 + 28678 PVPQIIPSV 9 91 475.290271850845 948.56599076849 2 475.2896606326103 MULTI CID FTMS 0 0 0 16092 484944.90625 0.3711819882421445 2 -0.1617431640625 12 Unmodified _PVPQIIPSV_ REV__ENSG00000138592|ENST00000307179|USP8;REV__ENST00000494673.1_1_6:31243358-31244615:+|nuORF;REV__nc|ENSG00000138592|P40818-2|USP8 42.09456458481378 0.0639583784996157 3 [{I|L}P]GGP{I|L}[{I|L}P]SV 10 -1 + 40.863 0.0 0.0 4.3079 4.3079 73.79 0.0 0.0 0.0 2.218487496163561 5.127108334148005 2.218487496163561 2.218487496163561 0 1.0440228147639203 1.154901959985743 0.0 0.0 [{I|L}P]GGP{I|L}[{I|L}P]SV;[VP]AGP{I|L}[{I|L}P]SV;[{I|L}P]NP{I|L}[{I|L}P]SV;[VP]QP{I|L}[{I|L}P]SV;[{I|L}P]GA[VP][{I|L}P]SV;[VP]AA[VP][{I|L}P]SV;[{I|L}P]Q[VP][{I|L}P]SV;[QP]VP{I|L}[{I|L}P]SV;[{I|L}P][VP]Q[{I|L}P]SV;[VP][{I|L}P]Q[{I|L}P]SV 4.3079;4.074;3.9366;3.7027;3.2832;3.0493;2.9119;2.9047;2.5946;2.3607 -;-;-;-;-;-;-;-;-;- 301 1 1.407 39434.8 1.0 10464 5638 16092 HBL1_DMSO_200M_050219_1,16104 HBL1_DMSO_200M_050219_1,16104,PVPQIIPSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16105 78.313 88.0 1173100.0 25 0 134490.0 + 30824 RIIEENIPEL 10 75 613.3414289219608 1224.6683049107214 2 613.3426391482353 MULTI CID FTMS 0 0 0 16092 496410.78125 0.7020477686884868 -1 0.118743896484375 13 Unmodified _RIIEENIPEL_ ENSG00000162231|ENST00000294172|NXF1;ENST00000531579.5_1_11:62564685-62568887:-|nuORF;nc|ENSG00000162231|Q9UBU9-2|NXF1 51.41523569358685 0.0718446036348414 3 EEN{I|L}PE{I|L} 7 3 46.547 0.0 0.0 3.8008 0.0 0.0 382.2687245099625 0.0 382.2687245099625 0.0 19.09965123117729 0.0 0.0 0 1.2786596949921218 0.0 0.0 0.805462187404089 + EEN{I|L}PE{I|L} 3.8008 + + 150 1 1.407 81645.5 1.0 10465 5638 16092 HBL1_DMSO_200M_050219_1,16105 HBL1_DMSO_200M_050219_1,16105,RIIEENIPEL True True RIIEENIPEL 78.312924 613.342639148235 6897054.0 16092.0 ENST00000531579.5_1_11:62564685-62568887:-|nuORF;;ENSG00000162231|ENST00000294172|NXF1;;nc|ENSG00000162231|Q9UBU9-2|NXF1 5.259190082550049 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16106 78.315 109.0 374630.0 25 0 36463.0 + 16553 KAYTDELVEL 10 69 590.8077839928966 0 590.8088256716728 PEAK CID FTMS 0 0 0 16092 390203.65625 0.7618625309360368 -1 0.118743896484375 14 Unmodified _KAYTDELVEL_ ENSG00000130382|ENST00000252674|MLLT1 24.99096001346401 0.2580721372233971 3 V{I|L}E 3 8 26.242 0.0 0.0 2.2247 0.0 0.0 260.13331146887805 575.2476290338499 835.380940502728 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.7742275032520141 0.0 V{I|L}E 2.2247 - 27 + 1 1.407 36381.4 1.0 10466 5638 16092 HBL1_DMSO_200M_050219_1,16106 HBL1_DMSO_200M_050219_1,16106,KAYTDELVEL False True KAYTDELVEL 78.315245 590.808825671673 16776937.5 16092.0 ENSG00000130382|ENST00000252674|MLLT1 5.320030212402344 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16107 78.317 48.0 962650.0 25 0 114010.0 + 19572 LFSWFVFF 8 96 546.7815702613268 1091.5485875894535 2 546.7794677615166 MULTI CID FTMS 0 0 0 16092 329448.5625 0.2531467957186923 2 -0.1617431640625 15 Unmodified _LFSWFVFF_ REV__ENSG00000130270|ENST00000310127|ATP8B3;REV__ENST00000531925.5_1_19:1789538-1806275:-|nuORF;REV__ENST00000533107.3_1_19:1799652-1806029:-|nuORF;REV__nc|ENSG00000130270|O60423-1|ATP8B3;REV__nc|ENSG00000130270|O60423-3|ATP8B3 10.183394434864962 0.7604730176254005 3 {[TV]|[{I|L}S]}YR{I|L}{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 8 -1 + 36.348 0.0 0.0 3.33 3.33 71.869 0.0 0.0 0.0 20.66946789630613 24.358500049694527 20.66946789630613 2.730012720637376 0 0.0 2.0 0.3494850021680094 0.0 {[TV]|[{I|L}S]}YR{I|L}{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[TV]|[{I|L}S]}[R{I|L}]Y{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[TV]|[{I|L}S]}Y[VG]{I|L}{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[TV]|[{I|L}S]}[R{I|L}][DN]{I|L}{[{M(Oxidation (M))|F}D]|MM};{[TV]|[{I|L}S]}Y[VG]{I|L}[QA]{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3.33;3.0799;2.4814;1.574;1.1144;0.4928 -;-;-;-;-;- 225 1 1.407 42513.3 1.0 10467 5638 16092 HBL1_DMSO_200M_050219_1,16107 HBL1_DMSO_200M_050219_1,16107,LFSWFVFF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16108 78.326 520.0 515490.0 25 0 91789.0 + + 879 NFPNGVTDF 9 131 1010.463994043944 1009.456717577344 1 1010.460864245892 MULTI CID FTMS 0 0 0 16092 337792.9375 0.684905339143137 -3 0.2963409423828125 16 Unmodified _AEVFPWDF_ nc|ENSG00000083312|Q92973-2|TNPO1;ENSG00000083312|ENST00000337273|TNPO1 38.15118350030904 0.2652218139009398 3 [NP]GVTD{M(Oxidation (M))|F}N{M(Oxidation (M))|F} 9 -1 + 73.588 0.0 0.0 7.2898 7.2898 89.005 0.0 0.0 0.0 17.861201800549196 13.467874862246568 13.467874862246568 6.790521660407137 0 0.0 0.744727494896694 1.203119819790884 1.329689690656103 [NP]GVTD{M(Oxidation (M))|F}N{M(Oxidation (M))|F};[NP]KED{M(Oxidation (M))|F}N{M(Oxidation (M))|F};[NP]GVTD{M(Oxidation (M))|F}GG{M(Oxidation (M))|F};[NP]GVT{M(Oxidation (M))|F}DN{M(Oxidation (M))|F};[NP]KED{M(Oxidation (M))|F}GG{M(Oxidation (M))|F};[NP]GVT{M(Oxidation (M))|F}ND{M(Oxidation (M))|F};[PG]NVTD{M(Oxidation (M))|F}N{M(Oxidation (M))|F};[PG]GKED{M(Oxidation (M))|F}N{M(Oxidation (M))|F};[NP]KE{M(Oxidation (M))|F}DN{M(Oxidation (M))|F};[NP]GV{M(Oxidation (M))|F}NTD{M(Oxidation (M))|F} 7.2898;6.6171;6.3776;5.9652;5.6996;5.6006;5.5204;5.4895;5.2925;5.2701 -;-;-;-;-;-;-;-;-;- 5098 1 1.407 172137.8 1.0 10468 5638 16092 HBL1_DMSO_200M_050219_1,16108 HBL1_DMSO_200M_050219_1,16108,AEVFPWDF False False NFPNGVTDF 78.325774 1010.46086424589 4358001.5 16092.0 nc|ENSG00000083312|Q92973-2|TNPO1;;ENSG00000083312|ENST00000337273|TNPO1 5.596896409988403 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16109 78.336 568.0 371250.0 25 0 26315.0 + 35893 SVLWPYLWEQL 11 152 717.379469034692 1432.7443851361838 2 717.3813964724541 MULTI CID FTMS 0 0 0 16092 276233.25 0.2488423624296865 -3 0.2963409423828125 17 Unmodified _SVLWPYLWEQL_ REV__ENST00000336714.7_1_20:18491522-18491615:+|nuORF 15.248480904072842 0.7179608125786238 3 [VS]{I|L}PDDSSK[{I|L}P]Y{I|L} 13 -1 + 78.468 0.0 0.0 5.4767 5.4767 88.156 0.0 0.0 0.0 12.02185280711882 10.23783514913309 10.23783514913309 14.600879154208826 0 0.8807196863200843 1.6989700043360187 0.4247425010840047 0.0 [VS]{I|L}PDDSSK[{I|L}P]Y{I|L};[VS]{I|L}PD{[C(Carbamidomethyl (C))E]|[WC]}K[{I|L}P]Y{I|L};[{I|L}P]YK{[C(Carbamidomethyl (C))E]|[WC]}[{M(Oxidation (M))|F}V]P{I|L}[PA];[{I|L}P]YKS{[DS]|[MA]|[CV]|TT}[{M(Oxidation (M))|F}V]P{I|L}[PA];[Y{I|L}]PK{[C(Carbamidomethyl (C))E]|[WC]}[{M(Oxidation (M))|F}V]P{I|L}[PA];[Y{I|L}]PKS{[DS]|[MA]|[CV]|TT}[{M(Oxidation (M))|F}V]P{I|L}[PA];{[QN]|[E{I|L}]|[KN]}W[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[KS]P{I|L}[PA];{[QN]|[E{I|L}]|[KN]}W[{M(Oxidation (M))|F}V][KP]HP{I|L}[PA];[KS]SWW{M(Oxidation (M))|F}[KS]P{I|L}[PA];[KS]SAK{[C(Carbamidomethyl (C))E]|[WC]}[{M(Oxidation (M))|F}V]P{I|L}[PA] 5.4767;4.4577;1.7382;1.5039;1.2614;1.027;0.75397;0.66677;0.58349;0.55922 -;-;-;-;-;-;-;-;-;- 2209 + 1 1.407 151359.5 1.0 10469 5638 16092 HBL1_DMSO_200M_050219_1,16109 HBL1_DMSO_200M_050219_1,16109,SVLWPYLWEQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16110 78.341 257.0 335830.0 25 0 49665.0 + 9133 FFQETNIPY 9 132 579.7794589163274 1157.5443648994546 2 579.7767211794853 MULTI CID FTMS 0 0 0 16092 270869.65625 0.9967530141506532 -1 0.118743896484375 18 Unmodified _FFQETNIPY_ ENSG00000153443|ENST00000283474|UBALD1;ENST00000590891.1_1_16:4660442-4660589:-|nuORF 24.020572477871973 0.2255576514309169 3 [EP]ND{I|L}[TP]{I|L}{M(Oxidation (M))|F}{I|L} 10 8 + 32.91 0.0 0.0 2.8431 2.8431 66.554 0.0 0.0 0.0 13.979400086720371 8.066884185923655 8.066884185923655 0.0122623118827647 0 0.5796896906561032 1.3010299956639813 0.0 0.0 [EP]ND{I|L}[TP]{I|L}{M(Oxidation (M))|F}{I|L};[EP]NN[TP]N{I|L}{M(Oxidation (M))|F}{I|L};[EP]GGD{I|L}[TP]{I|L}{M(Oxidation (M))|F}{I|L};[EP]NGG[TP]N{I|L}{M(Oxidation (M))|F}{I|L};[EP]NN[TP]GG{I|L}{M(Oxidation (M))|F}{I|L};[EP]GGN[TP]N{I|L}{M(Oxidation (M))|F}{I|L};[DP]QD{I|L}[TP]{I|L}{M(Oxidation (M))|F}{I|L};[DP]QN[TP]N{I|L}{M(Oxidation (M))|F}{I|L};[EP]N[{M(Oxidation (M))|F}V][RH]{M(Oxidation (M))|F}{I|L};[DP]NE{I|L}[TP]{I|L}{M(Oxidation (M))|F}{I|L} 2.8431;2.842;2.0514;2.0503;2.0503;2.0503;1.6354;1.6343;1.5531;1.5275 -;-;-;-;-;-;-;-;-;- 940 1 1.407 72176.4 1.0 10470 5638 16092 HBL1_DMSO_200M_050219_1,16110 HBL1_DMSO_200M_050219_1,16110,FFQETNIPY False True FFQETNIPY 78.340528 579.776721179485 2965134.0 16092.0 ENST00000590891.1_1_16:4660442-4660589:-|nuORF;;ENSG00000153443|ENST00000283474|UBALD1 0.6107996702194214 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16111 78.342 75.0 1105600.0 25 0 83408.0 + 41494 VPMPYTLKV 9 114 524.3000221582583 1046.5854913833166 2 524.2989990115166 MULTI CID FTMS 0 0 0 16092 269569.59375 0.1290607045721117 -3 0.2963409423828125 19 Unmodified _VPMPYTLKV_ ENSG00000116701|ENST00000367535|NCF2;nc|ENSG00000116701|P19878-2|NCF2;nc|ENSG00000116701|P19878-3|NCF2;nc|ENSG00000116701|P19878-4|NCF2 24.99096001346401 0.2132109383330889 3 VPMVP 5 6 50.037 0.0 0.0 4.7809 0.0 0.0 0.0 520.2860811822874 520.2860811822874 22.456903350432924 0.0 0.0 0.0 0 0.805462187404089 1.154901959985743 0.0 0.0 VPMVP 4.7809 - 477 + 1 1.407 69888.8 1.0 10471 5638 16092 HBL1_DMSO_200M_050219_1,16111 HBL1_DMSO_200M_050219_1,16111,VPMPYTLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16112 78.354 698.0 622970.0 25 0 33262.0 + 45854 YYQEYPMSI 9 252 597.2623239266977 1192.5100949201951 2 597.2625610232353 MULTI CID FTMS 0 0 0 16092 196196.34375 0.2453568178491032 -3 0.2963409423828125 20 Unmodified _YYQEYPMSI_ ENSG00000138074|ENST00000310574|SLC5A6;ENST00000488743.6_1_2:27425876-27434347:-|nuORF 75.76082778847304 0.0188720312721366 3 YYQEYPM{[TV]|[{I|L}S]} 9 0 + 60.515 0.0 0.0 5.0746 5.0746 75.513 0.0 0.0 0.0 2.438127225409602 7.147642715192504 2.438127225409602 1.7609125905568137 0 1.5114393726401687 1.5228787452803376 0.2302046884880938 0.5228787452803376 + + YYQEYPM{[TV]|[{I|L}S]};YYEQYPM{[TV]|[{I|L}S]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YYYPM{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}S[HM]YPM{[TV]|[{I|L}S]};[YQ]EYYPM{[TV]|[{I|L}S]};[YE]QYYPM{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}[EP]EYPM{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}V]{[CA]|SS}YYPM{[TV]|[{I|L}S]};YYQYEPM{[TV]|[{I|L}S]};YY[AG]EYPM{[TV]|[{I|L}S]} 5.0746;4.927;4.8702;4.6207;4.5554;4.3346;4.2538;4.1496;3.8954;3.864 +;-;-;-;-;-;-;-;-;- + 1824 1 1.407 310932.0 1.0 10472 5638 16092 HBL1_DMSO_200M_050219_1,16112 HBL1_DMSO_200M_050219_1,16112,YYQEYPMSI True True YYQEYPMSI 78.354395 597.262561023235 5598842.5 16092.0 ENSG00000138074|ENST00000310574|SLC5A6;;ENST00000488743.6_1_2:27425876-27434347:-|nuORF 5.656008720397949 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16114 78.367 596.0 326010.0 25 0 47841.0 + 29691 QPFILLYVLGF 11 204 655.3822983569952 1308.7500437807903 2 655.3826782107353 MULTI CID FTMS 0 0 0 16113 333900.5625 0.2460454287964408 14 -1.2201690673828125 1 Unmodified _QPFILLYVLGF_ REV__ENSG00000164742|ENST00000297323|ADCY1 5.731851221503515 0.8481046878870278 3 [QP]AD{I|L}[PG]D{I|L}Y{I|L} 11 -1 39.612 0.0 0.0 3.0267 0.0 0.0 0.0 123.1307560212778 123.1307560212778 29.01630646158217 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3807196863200844 0.2396518287104437 [QP]AD{I|L}[PG]D{I|L}Y{I|L} 3.0267 - 671 1 1.407 157317.2 1.0 10473 5639 16113 HBL1_DMSO_200M_050219_1,16114 HBL1_DMSO_200M_050219_1,16114,QPFILLYVLGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16115 78.368 14.0 2205700.0 25 0 192250.0 + 12384 GTIDEIQKLHI 11 63 633.85759472107 1265.70063650894 2 633.8586303591728 MULTI CID FTMS 0 0 0 16113 2109616.75 1.0 0 0.0 2 Unmodified _GTIDEIQKLHI_ ENSG00000167986|ENST00000301764|DDB1 43.476825903602695 0.1588371419577413 3 E{I|L}KQ{I|L}ED[RP] 9 9 55.87 0.0 0.0 4.4141 0.0 0.0 139.11071974922032 0.0 139.11071974922032 0.0 43.98555739475486 0.0 0.0 0 0.7742275032520141 0.0 1.0941876774005248 0.3494850021680094 E{I|L}KQ{I|L}ED[RP] 4.4141 - 214 1 1.407 33342.9 1.0 10474 5639 16113 HBL1_DMSO_200M_050219_1,16115 HBL1_DMSO_200M_050219_1,16115,GTIDEIQKLHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16116 78.369 33.0 1607800.0 25 0 127880.0 + 25334 NALDKVLSV 9 84 479.78167184933096 957.548790765462 2 479.7812072634697 MULTI CID FTMS 0 0 0 16113 826255.375 0.1836625882908387 -2 0.1837539672851562 3 Unmodified _NALDKVLSV_ ENSG00000159063|ENST00000299626|ALG8;ENST00000524925.1_1_11:77817969-77825348:-|nuORF;nc|ENSG00000159063|Q9BVK2-2|ALG8 38.17557092003332 0.0854718145212029 3 {[QG]|[NA]}{I|L}[R{M(Oxidation (M))|F}]PK{I|L} 8 6 + 43.07 0.0 0.0 4.4979 4.4979 84.317 0.0 0.0 0.0 16.96465064426599 3.364875295848435 3.364875295848435 12.272437815030624 0 0.9247425010840048 2.0 0.0 0.0 {[QG]|[NA]}{I|L}[R{M(Oxidation (M))|F}]PK{I|L};{[QG]|[NA]}{I|L}VV{[DS]|[MA]|[CV]|TT}K{I|L} 4.4979;3.2163 -;- 444 + 1 1.407 43586.3 1.0 10475 5639 16113 HBL1_DMSO_200M_050219_1,16116 HBL1_DMSO_200M_050219_1,16116,NALDKVLSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16117 78.371 99.0 872440.0 25 0 132470.0 + 40695 VIFTKFDEV 9 103 549.2948762040522 1096.5751994749044 2 549.2970458865166 MULTI CID FTMS 0 0 0 16113 567655.875 0.5447740375367404 -2 0.1837539672851562 4 Unmodified _VLFYSKFHG_ nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1 21.74664581756881 0.2544899275067181 3 [{I|L}V]{M(Oxidation (M))|F}VD{M(Oxidation (M))|F}{M(Oxidation (M))|F}T 8 5 71.394 0.0 0.0 6.5106 0.0 0.0 0.0 125.07241235904532 125.07241235904532 37.6654776535851 0.0 0.0 0.0 0 0.0 2.0 2.0783409326844264 0.0 [{I|L}V]{M(Oxidation (M))|F}VD{M(Oxidation (M))|F}{M(Oxidation (M))|F}T 6.5106 - 1066 + 1 1.407 73652.6 1.0 10476 5639 16113 HBL1_DMSO_200M_050219_1,16117 HBL1_DMSO_200M_050219_1,16117,VLFYSKFHG False False VIFTKFDEV 78.371428 549.297045886517 7353974.0 16113.0 nc|ENSG00000074054|Q7Z460-5|CLASP1;;nc|ENSG00000074054|Q7Z460-4|CLASP1;;nc|ENSG00000074054|Q7Z460|CLASP1;;nc|ENSG00000074054|Q7Z460-3|CLASP1;;ENSG00000074054|ENST00000696935|CLASP1;;nc|ENSG00000074054|Q7Z460-2|CLASP1 3.332058072090149 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16118 78.373 68.0 825680.0 25 0 174110.0 + 3284 AYHGLTVPL 9 80 485.77206504871015 969.5295771642204 2 485.7722961306572 MULTI CID FTMS 0 0 0 16113 571405.125 0.1734034917244502 3 -0.2544021606445312 5 Unmodified _AYHGLTVPL_ ENSG00000113732|ENST00000519374|ATP6V0E1 40.44857923139169 0.0729940656229577 3 VTEPSP{I|L} 7 7 38.18 0.0 0.0 3.938 0.0 0.0 228.1445196464453 0.0 228.1445196464453 0.0 27.46661994673893 0.0 0.0 0 0.0 0.0 1.0 0.0 VTEPSP{I|L} 3.938 - 321 + 1 1.407 49627.7 1.0 10477 5639 16113 HBL1_DMSO_200M_050219_1,16118 HBL1_DMSO_200M_050219_1,16118,AYHGLTVPL True True AYHGLTVPL 78.373034 485.772296130657 140977680.0 16113.0 ENSG00000113732|ENST00000519374|ATP6V0E1 5.387986024220784 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16119 78.374 53.0 410580.0 25 0 25484.0 36946 TEWLKTDI 8 48 503.26680614918143 0 503.2662841677666 PEAK CID FTMS 0 0 0 16113 543156.1875 0.3718931268767435 3 -0.2544021606445312 6 Unmodified _TEWLKTDI_ ENST00000566178.5_1_15:29077574-29083872:+|nuORF 5.760428011301431 0.5786759180849727 3 TEA 3 6 14.693 0.0 0.0 1.4627 0.0 0.0 170.06027137863788 530.3111666315061 700.371438010144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TEA 1.4627 - 9 + 1 1.407 24490.0 1.0 10478 5639 16113 HBL1_DMSO_200M_050219_1,16119 HBL1_DMSO_200M_050219_1,16119,TEWLKTDI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16120 78.376 77.0 941640.0 25 0 74851.0 + 18265 KVIEINPYL 9 121 544.8207883877005 1087.627023842201 2 544.8221923708916 MULTI CID FTMS 0 0 0 16113 232133.796875 0.0306254831535222 -4 0.3613510131835937 7 Unmodified _KVIEINPYL_ ENSG00000100804|ENST00000361611|PSMB5;ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000100804|P28074-2|PSMB5;nc|ENSG00000204264|P28062-2|PSMB8 32.78568957990786 0.1150597335874693 3 {[TV]|[{I|L}S]}{I|L}R{I|L}NPP 8 4 39.759 0.0 0.0 3.6556 0.0 0.0 0.0 194.0803068834697 194.0803068834697 15.57803014928544 0.0 0.0 0.0 0 0.7887254899964358 0.6020599913279624 0.0 0.4247425010840047 {[TV]|[{I|L}S]}{I|L}R{I|L}NPP 3.6556 - 475 1 1.407 69195.7 1.0 10479 5639 16113 HBL1_DMSO_200M_050219_1,16120 HBL1_DMSO_200M_050219_1,16120,KVIEINPYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16121 78.38 209.0 384710.0 25 0 19665.0 + 30608 RFFDTNTSVL 10 115 600.3061654567218 1198.5977779802436 2 600.3058959841728 MULTI CID FTMS 0 0 0 16113 259073.71875 0.0800739248324431 -2 0.1837539672851562 8 Unmodified _RFFDTNTSVL_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 51.41523569358685 0.0718446036348414 3 [R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}DTNTSV{I|L} 10 0 + 63.351 0.0 0.0 5.2855 5.2855 84.211 0.0 0.0 0.0 3.7751372576825295 45.44653786155799 3.7751372576825295 8.750612633917001 0 0.5 0.0 1.3494850021680094 0.3252574989159953 + + [R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}DTNTSV{I|L};{[QN]|[E{I|L}]|[KN]}[WH]TNTSV{I|L};[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}DTGGTSV{I|L};{[QG]|[NA]}[HK]DTNTSV{I|L};{[YC]|[HE]}[W{I|L}]TNTSV{I|L};[AG]G[HK]DTNTSV{I|L};{[QN]|[E{I|L}]|[KN]}[WH]TGGTSV{I|L};{[QG]|[NA]}[HK]DTGGTSV{I|L};{[QS]|[NT]}[HA]AATNTSV{I|L};{[QS]|[NT]}[HT]{[NV]|[RG]}NTSV{I|L} 5.2855;4.5554;4.5209;4.1746;4.0531;3.8407;3.7908;3.413;3.3255;3.2102 +;-;-;-;-;-;-;-;-;- + 749 1 1.407 59491.3 1.0 10480 5639 16113 HBL1_DMSO_200M_050219_1,16121 HBL1_DMSO_200M_050219_1,16121,RFFDTNTSVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16122 78.385 285.0 372910.0 25 0 39722.0 + 7847 ELKYVEKKVT 10 125 618.8622300094592 0 618.8620483279228 PEAK CID FTMS 0 0 0 16113 202765.84375 0.3419115620627965 8 -0.7364730834960938 9 Unmodified _ELKYVEKKVT_ REV__ENSG00000165323|ENST00000525166|FAT3;REV__nc|ENSG00000165323|Q8TDW7-2|FAT3;REV__nc|ENSG00000165323|Q8TDW7|FAT3 5.731851221503515 0.3961065659209837 3 WW 2 -1 3.1876 0.0 0.0 0.25796 0.0 0.0 449.2844442945057 411.2240389459594 860.5084832404651 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WW 0.25796 - 42 + 1 1.407 82424.3 1.0 10481 5639 16113 HBL1_DMSO_200M_050219_1,16122 HBL1_DMSO_200M_050219_1,16122,ELKYVEKKVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16123 78.397 635.0 133120.0 25 0 11695.0 -1 0 121 1047.4742558734683 2092.933958813737 2 1047.972094714642 MULTI CID FTMS 0 0 0 16113 202483.046875 0.4138013473554762 3 -0.2544021606445312 10 3 {[TV]|[{I|L}S]}AADTA{I|L} 8 -1 45.265 0.0 0.0 2.1627 0.0 0.0 0.0 1347.5204117271971 1347.5204117271971 14.586114674214276 0.0 0.0 0.0 0 0.0 1.2218487496163564 2.168826521534556 0.0 {[TV]|[{I|L}S]}AADTA{I|L} 2.1627 - 10504 1 1.407 59554.8 1.0 10482 5639 16113 HBL1_DMSO_200M_050219_1,16123 HBL1_DMSO_200M_050219_1,16123, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16124 78.409 727.0 593700.0 25 0 42325.0 39052 TVVGEEWVDD 10 304 574.7592916255289 1147.5040303178578 2 574.7592040896416 MULTI CID FTMS 0 0 0 16113 199167.03125 0.2332464857736129 42 -2.9860763549804688 11 Unmodified _TVVGEEWVDD_ ENSG00000143536|ENST00000271835|CRNN 30.63653989081413 0.2803493085145199 3 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}[Y{I|L}]ME{M(Oxidation (M))|F} 9 7 + 45.952 0.0 0.0 4.0045 4.0045 83.889 0.0 0.0 0.0 11.25955625825256 2.1349281074461857 2.1349281074461857 17.749898929865058 0 0.3807196863200844 2.0 1.2302046884880935 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}[Y{I|L}]ME{M(Oxidation (M))|F};NY[RH]M{[CP]|[EA]}EV;{[TV]|[{I|L}S]}V[YE][YV]E{M(Oxidation (M))|F};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}[HN][MD]W;{[TV]|[{I|L}S]}S[WP]M{[CP]|[EA]}EV;{[TV]|[{I|L}S]}P{[WS]|[C(Carbamidomethyl (C)){I|L}]}M{[CP]|[EA]}EV;{[TV]|[{I|L}S]}S[PG]EM{[CP]|[EA]}EV;{[TV]|[{I|L}S]}P[SG]EM{[CP]|[EA]}EV;{[TV]|[{I|L}S]}PM{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[CP]|[EA]}EV;{[TV]|[{I|L}S]}PMAAM{[CP]|[EA]}EV 4.0045;2.4577;2.3344;2.3098;2.2605;2.2605;2.2244;2.2244;2.2021;2.0971 -;-;-;-;-;-;-;-;-;- 1578 + 1 1.407 310967.0 1.0 10483 5639 16113 HBL1_DMSO_200M_050219_1,16124 HBL1_DMSO_200M_050219_1,16124,TVVGEEWVDD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16125 78.411 96.0 490450.0 25 0 94524.0 22233 LPREYTVI 8 91 495.7845000201853 989.5544471071706 2 495.7849304080009 MULTI CID FTMS 0 0 0 16113 187494.875 0.7748522574646141 -2 0.1837539672851562 12 Unmodified _LPREYTVI_ ENSG00000149090|ENST00000619888|PAMR1;ENST00000534803.1_1_11:35474916-35547133:-|nuORF;nc|ENSG00000149090|Q6UXH9-2|PAMR1;nc|ENSG00000149090|Q6UXH9-3|PAMR1 18.13498045792455 0.6430038125133779 3 E[WQ]KAV 6 7 22.14 0.0 0.0 2.2374 0.0 0.0 230.16212640580187 0.0 230.16212640580187 0.0 9.041068762088996 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 E[WQ]KAV 2.2374 - 64 + 1 1.407 42395.9 1.0 10484 5639 16113 HBL1_DMSO_200M_050219_1,16125 HBL1_DMSO_200M_050219_1,16125,LPREYTVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16126 78.419 429.0 217020.0 25 0 31881.0 9142 FFRVQLPKRY 10 132 451.9322425727727 1352.774898318518 3 452.2667114138603 MULTI CID FTMS 0 0 0 16113 160839.703125 0.5125719219640155 -3 0.255889892578125 13 Unmodified _FFRVQLPKRY_ ENSG00000011454|ENST00000373647|RABGAP1;ENSG00000152061|ENST00000681986|RABGAP1L;ENST00000474707.1_1_9:125835857-125839047:+|nuORF;nc|ENSG00000152061|Q5R372-3|RABGAP1L;nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372-5|RABGAP1L;nc|ENSG00000152061|Q5R372-6|RABGAP1L;nc|ENSG00000152061|Q5R372-7|RABGAP1L;nc|ENSG00000152061|Q5R372-8|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L 3.944395688203298 0.708391353636983 3 {I|L} 1 9 12.764 0.0 0.0 0.94356 0.0 0.0 1221.6800019335556 0.0 1221.6800019335556 0.0 1.3442265614629 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.94356 + + 137 + 1 1.407 83975.8 1.0 10485 5639 16113 HBL1_DMSO_200M_050219_1,16126 HBL1_DMSO_200M_050219_1,16126,FFRVQLPKRY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16127 78.434 800.0 286120.0 25 0 25583.0 15517 IPVGSPILL 9 166 454.794397495079 0 454.7947265505791 PEAK CID FTMS 0 0 0 16113 142910.453125 0.6655442395987758 7 -0.6215744018554688 14 Unmodified _IPVGSPILL_ ENSG00000086570|ENST00000261800|FAT2 23.1484247019978 0.1725298825155634 3 P{I|L}KVVD 6 8 20.979 0.0 0.0 2.3116 0.0 0.0 185.1046434315552 68.05138574771718 253.1560291792724 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}KVVD 2.3116 - 260 + 1 1.407 179297.1 0.699999988079071 10486 5639 16113 HBL1_DMSO_200M_050219_1,16127 HBL1_DMSO_200M_050219_1,16127,IPVGSPILL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16128 78.437 161.0 667350.0 25 0 73125.0 + 8722 EVLLRSKIP 9 131 352.2251925286696 1053.6537481862088 3 352.2249328494072 MULTI CID FTMS 0 0 0 16113 124336.96875 0.3360363820817892 -4 0.3613510131835937 15 Unmodified _EVLLRSKIP_ REV__Tigger2b_Pri_dup1770|chr15:88634948-88635968:-|1.005140273448427|0.0574243708712047|4.13|47.0|39|3|sense 17.44264345198275 0.3645313841742926 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L} 4 -1 37.747 0.0 0.0 3.5825 0.0 0.0 0.0 596.3545558613208 596.3545558613208 24.252509456924827 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L} 3.5825 + + 75 + 1 1.407 90599.3 1.0 10487 5639 16113 HBL1_DMSO_200M_050219_1,16128 HBL1_DMSO_200M_050219_1,16128,EVLLRSKIP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16129 78.451 800.0 162700.0 25 0 14160.0 + 7540 EIEKWLQLAKI 11 181 685.9082605941485 1369.8019682550969 2 686.4099609255791 MULTI CID FTMS 0 0 0 16113 117561.828125 0.4473753059073975 -8 0.7180938720703125 16 Unmodified _EIEKWLQLAKI_ REV__nc|ENSG00000164172|O96033|MOCS2 8.155526934196011 0.8366696279279818 3 {[QN]|[E{I|L}]|[KN]}T{I|L} 4 -1 24.781 0.0 0.0 1.8091 0.0 0.0 0.0 910.51950300535 910.51950300535 11.92803136799156 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[QN]|[E{I|L}]|[KN]}T{I|L} 1.8091 - 687 1 1.407 95465.8 0.9100000262260436 10488 5639 16113 HBL1_DMSO_200M_050219_1,16129 HBL1_DMSO_200M_050219_1,16129,EIEKWLQLAKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16131 78.455 9.5 8033800.0 25 0 1396500.0 + 2986 AVIGDVIRV 9 61 471.2925295917672 940.5705062503343 2 471.2928649783134 MULTI CID FTMS 0 0 0 16130 7687423.5 0.5918954216058184 1 -0.0700454711914062 1 Unmodified _AVIGDVIRV_ ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21 34.40172386719151 0.1061884637610825 3 {[VA]|[{I|L}G]}{I|L}GDV{I|L}[RV] 9 0 + 69.869 0.0 0.0 7.4283 7.4283 83.979 0.0 0.0 0.0 55.43182501400722 9.137342758552691 9.137342758552691 2.455678082598922 0 0.75 2.0 0.0 0.3494850021680094 + + {[VA]|[{I|L}G]}{I|L}GDV{I|L}[RV];{[VA]|[{I|L}G]}VADV{I|L}[RV];{[VA]|[{I|L}G]}{I|L}VGD{I|L}[RV];{[VA]|[{I|L}G]}{I|L}GVD{I|L}[RV];{[VA]|[{I|L}G]}V{I|L}GD{I|L}[RV];{[VA]|[{I|L}G]}VAVD{I|L}[RV];{[VA]|[{I|L}G]}DV[VG]{I|L}[R{I|L}] 7.4283;7.1673;6.3984;6.3136;6.1373;6.0526;3.7829 +;-;-;-;-;-;- + 188 + 1 1.461 63797.8 1.0 10489 5640 16130 HBL1_DMSO_200M_050219_1,16131 HBL1_DMSO_200M_050219_1,16131,AVIGDVIRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16132 78.457 11.0 11624000.0 25 0 806240.0 + 2292 AQIDHYLGL 9 118 515.2718087584489 1028.5290645836976 2 515.2721435427666 MULTI CID FTMS 0 0 0 16130 7048253.0 0.7318840790398126 -1 0.0967330932617187 2 Unmodified _AQIDHYLGL_ ENSG00000115310|ENST00000337526|RTN4;ENST00000485749.1_1_2:55200294-55201100:-|nuORF;nc|ENSG00000115310|Q9NQC3-2|RTN4;nc|ENSG00000115310|Q9NQC3-3|RTN4;nc|ENSG00000115310|Q9NQC3-4|RTN4;nc|ENSG00000115310|Q9NQC3-5|RTN4;nc|ENSG00000115310|Q9NQC3-6|RTN4 99.79894945604345 0.0109923542231827 3 [Y{I|L}]HDQA{I|L}G{I|L} 9 5 + 65.482 0.0 0.0 6.3665 6.3665 81.369 0.0 0.0 0.0 2.803392303431352 5.117453303553269 2.803392303431352 2.803392303431352 0 0.7302046884880937 1.5228787452803376 0.6139829889124311 0.7302046884880937 [Y{I|L}]HDQA{I|L}G{I|L};[QA]{I|L}DHY{I|L}G{I|L};[HD]{I|L}YQA{I|L}G{I|L};{[WN]|[YH]}D{I|L}QA{I|L}G{I|L};[Y{I|L}]HDGAA{I|L}G{I|L};{[WN]|[YH]}D{I|L}GAA{I|L}G{I|L};{[WN]|[YH]}{I|L}DQA{I|L}G{I|L};{[WN]|[YH]}{I|L}DGAA{I|L}G{I|L};[HD]Y{I|L}QA{I|L}G{I|L};{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]}DQA{I|L}G{I|L} 6.3665;6.094;5.9394;5.6425;5.5351;5.521;5.4712;5.3498;5.3498;5.274 -;+;-;-;-;-;-;-;-;- + 1498 1 1.461 95258.7 1.0 10490 5640 16130 HBL1_DMSO_200M_050219_1,16132 HBL1_DMSO_200M_050219_1,16132,AQIDHYLGL True True AQIDHYLGL 78.456656 515.272143542767 152823920.0 16130.0 nc|ENSG00000115310|Q9NQC3-2|RTN4;;nc|ENSG00000115310|Q9NQC3-3|RTN4;;ENSG00000115310|ENST00000337526|RTN4;;nc|ENSG00000115310|Q9NQC3-5|RTN4;;ENST00000485749.1_1_2:55200294-55201100:-|nuORF;;nc|ENSG00000115310|Q9NQC3-6|RTN4;;nc|ENSG00000115310|Q9NQC3-4|RTN4 6.701696395874023 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16133 78.458 15.0 6067800.0 25 0 525470.0 + 13619 HPPSHWPLI 9 107 542.2903820269429 1082.5662111206857 2 542.2909423708916 MULTI CID FTMS 0 0 0 16130 4414303.0 0.3643998216924359 -7 0.630950927734375 3 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 97.07464715276576 0.0121042244793311 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L} 9 2 + 71.569 0.0 0.0 6.6111 6.6111 78.844 0.0 0.0 0.0 0.944825567400315 35.58311459537022 0.944825567400315 0.682503180159344 0 1.829689690656103 0.0 1.3129529932484498 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWPH{I|L}{I|L};[WP][HS]PHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPPH{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]PHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PP{I|L}H{I|L} 6.6111;6.548;6.0032;5.9267;5.4852;5.4282;5.1868;4.9405;4.5663;4.557 -;-;-;-;-;-;-;-;-;- 1017 1 1.461 76533.7 1.0 10491 5640 16130 HBL1_DMSO_200M_050219_1,16133 HBL1_DMSO_200M_050219_1,16133,HPPSHWPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16134 78.459 32.0 2954900.0 25 0 156310.0 + 12383 GTIDEIQKLHI 11 103 422.9061454617735 1265.6966069855205 3 422.9065429568291 MULTI CID FTMS 0 0 0 16130 2679543.5 0.6756339575754401 1 -0.0700454711914062 4 Unmodified _GTIDEIQKLHI_ ENSG00000167986|ENST00000301764|DDB1 51.76506608216692 0.1078551230621665 3 {[SA]|[TG]}{I|L}DE{I|L}QK{I|L}H{I|L} 11 0 + 97.784 0.0 0.0 7.7257 7.7257 86.161 0.0 0.0 0.0 27.36758565225417 3.245110915135029 3.245110915135029 3.245110915135029 0 0.3807196863200844 2.0 0.8494850021680094 0.7302046884880937 + + {[SA]|[TG]}{I|L}DE{I|L}QK{I|L}H{I|L};{[SA]|[TG]}{I|L}DE{I|L}QK{I|L}{I|L}H;{[SA]|[TG]}{I|L}DE{I|L}[AG]K{I|L}H{I|L};{[SA]|[TG]}{I|L}DE{I|L}[AG]K{I|L}{I|L}H;[H{I|L}]KQ{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Q[K{I|L}]{I|L}H[RD];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Q[K{I|L}]H{I|L}[RD];[H{I|L}]KQ{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}[RP];[H{I|L}]K[AG]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[AG][K{I|L}]{I|L}H[RD] 7.7257;7.4693;7.0045;6.7481;1.7412;1.4599;1.3591;1.2307;1.0171;0.73584 +;-;-;-;-;-;-;-;-;- + 930 + 1 1.461 92849.5 1.0 10492 5640 16130 HBL1_DMSO_200M_050219_1,16134 HBL1_DMSO_200M_050219_1,16134,GTIDEIQKLHI True True GTIDEIQKLHI 78.459013 422.906542956829 92492786.0 16130.0 ENSG00000167986|ENST00000301764|DDB1 5.639170964558919 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16135 78.46 28.0 2791500.0 25 0 391690.0 19469 LFFTNKLQLQ 10 67 626.3609505499721 1250.7073481667442 2 626.8619872927666 MULTI CID FTMS 0 0 0 16130 2499880.5 0.6738571106644872 -1 0.0967330932617187 5 Unmodified _LFFTNKLQLQ_ ENSG00000153832|ENST00000283946|FBXO36;nc|ENSG00000153832|Q8NEA4-3|FBXO36 13.042465956692816 0.6287021003332052 3 T{I|L}VTSVSA{I|L}Q 10 7 67.243 0.0 0.0 5.3764 0.0 0.0 233.1373768537125 0.0 233.1373768537125 0.0 55.195215132708135 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T{I|L}VTSVSA{I|L}Q 5.3764 - 258 1 1.461 64871.3 1.0 10493 5640 16130 HBL1_DMSO_200M_050219_1,16135 HBL1_DMSO_200M_050219_1,16135,LFFTNKLQLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16136 78.461 37.0 3631100.0 25 0 346980.0 + 41862 VPYPLPKI 8 92 463.7892037353869 925.563854537574 2 463.7894775271416 MULTI CID FTMS 0 0 0 16130 2317311.25 0.4602062447974336 -1 0.0967330932617187 6 Unmodified _VPYPLPKI_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1 63.562846038646086 0.116059504757595 3 VPYP{I|L}PK{I|L} 8 0 + 81.803 0.0 0.0 8.8382 8.8382 91.003 0.0 0.0 0.0 33.39948061694351 11.303337684950066 11.303337684950066 6.064921830680703 0 1.4916440611282624 1.6989700043360187 0.0 0.0 + + VPYP{I|L}PK{I|L};VPY{I|L}PPK{I|L};VPYP{I|L}{I|L}[KP];VPY{I|L}P{I|L}[KP] 8.8382;8.1829;7.617;6.9617 +;-;-;- + 288 + 1 1.461 105635.9 1.0 10494 5640 16130 HBL1_DMSO_200M_050219_1,16136 HBL1_DMSO_200M_050219_1,16136,VPYPLPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16137 78.463 27.0 3573800.0 25 0 343730.0 + 31890 RTMENLVEL 9 93 552.7893612215938 1103.5641695099876 2 552.7901489138603 MULTI CID FTMS 0 0 0 16130 1815876.625 0.4530959553884747 -1 0.0967330932617187 7 Unmodified _RTMENLVEL_ ENSG00000078246|ENST00000448120|TULP3;nc|ENSG00000078246|O75386-2|TULP3 28.49450938151212 0.1686335738423394 3 TV{I|L}NEQE{I|L} 8 5 51.456 0.0 0.0 4.6627 0.0 0.0 159.0912824023688 0.0 159.0912824023688 0.0 28.682732250188767 0.0 0.0 0 0.5 0.0 0.5 0.2887254899964357 TV{I|L}NEQE{I|L} 4.6627 - 532 + 1 1.461 82590.7 1.0 10495 5640 16130 HBL1_DMSO_200M_050219_1,16137 HBL1_DMSO_200M_050219_1,16137,RTMENLVEL False True RTMENLVEL 78.462548 552.79014891386 21868790.0 16130.0 nc|ENSG00000078246|O75386-2|TULP3;;ENSG00000078246|ENST00000448120|TULP3 4.42011038462321 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16138 78.464 43.0 2416400.0 25 0 270240.0 + 35954 SVPNKDVFQEL 11 108 638.3325191712581 1274.6504854093162 2 638.3331176638603 MULTI CID FTMS 0 0 0 16130 1552119.875 0.4260839234027805 -1 0.0967330932617187 8 Unmodified _SVPNKDVFQEL_ ENSG00000115919|ENST00000264170|KYNU 43.9818466556824 0.1510575460884947 3 [VS]PYQ{M(Oxidation (M))|F}VDK 9 7 91.393 0.0 0.0 7.17 0.0 0.0 0.0 208.07320581607652 208.07320581607652 64.46487221177901 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.6109243748081782 1.8807196863200843 [VS]PYQ{M(Oxidation (M))|F}VDK 7.17 - 1658 + 1 1.461 79290.7 1.0 10496 5640 16130 HBL1_DMSO_200M_050219_1,16138 HBL1_DMSO_200M_050219_1,16138,SVPNKDVFQEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16139 78.465 65.0 2112700.0 25 0 228500.0 + 3165 AVTEAFVRL 9 129 503.289878748795 1004.56520456439 2 503.2899352908134 MULTI CID FTMS 0 0 0 16130 962131.875 0.4726208236953944 -1 0.0967330932617187 9 Unmodified _AVTEAFVRL_ ENSG00000137411|ENST00000676266|VARS2;ENSG00000204394|ENST00000375663|VARS1;ENST00000477288.5_1_6:30884740-30893984:+|nuORF;nc|ENSG00000137411|Q5ST30-3|VARS2;nc|ENSG00000137411|Q5ST30-4|VARS2;nc|ENSG00000204394|P26640-2|VARS1 85.27202061508552 0.0162393975915471 3 {[VA]|[{I|L}G]}TEA{M(Oxidation (M))|F}VR{I|L} 9 0 {[VA]|[{I|L}G]} + + 60.066 23.724 13.946 5.9793 5.9793 59.013 0.0 0.0 0.0 0.0 24.427454041585364 0.0 0.0 0 1.048455006504028 0.0 0.4247425010840047 0.5649093276264391 + + {[VA]|[{I|L}G]}TEA{M(Oxidation (M))|F}VR{I|L} 5.9793 + + 731 + 1 1.461 107437.2 1.0 10497 5640 16130 HBL1_DMSO_200M_050219_1,16139 HBL1_DMSO_200M_050219_1,16139,AVTEAFVRL True True AVTEAFVRL 78.465342 503.289935290813 13548312.0 16130.0 nc|ENSG00000137411|Q5ST30-4|VARS2;;nc|ENSG00000137411|Q5ST30-3|VARS2;;ENSG00000137411|ENST00000676266|VARS2;;nc|ENSG00000204394|P26640-2|VARS1;;ENST00000477288.5_1_6:30884740-30893984:+|nuORF;;ENSG00000204394|ENST00000375663|VARS1 5.956941922505696 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16140 78.467 65.0 2281000.0 25 0 378420.0 + 38903 TVLEKVYEL 9 133 547.3124347115239 1092.6103164898475 2 547.3137084841728 MULTI CID FTMS 0 0 0 16130 801295.4375 0.5340598829633727 -1 0.0967330932617187 10 Unmodified _TVLEKVYEL_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 39.21299971606389 0.0797768173001226 3 {[TV]|[{I|L}S]}G{I|L}VYTVNK 10 7 + 76.469 0.0 0.0 6.9987 6.9987 84.207 0.0 0.0 0.0 3.2403126772771884 43.43846989161802 3.2403126772771884 3.155279824084033 0 0.5 2.0 1.7134679910804405 0.0 {[TV]|[{I|L}S]}G{I|L}VYTVNK;{[TV]|[{I|L}S]}GV{I|L}YTVNK;{[TV]|[{I|L}S]}G{I|L}VYE[KG]K;{[TV]|[{I|L}S]}GV{I|L}YE[KG]K;{[TV]|[{I|L}S]}G{I|L}VYE{I|L}S{I|L};{[TV]|[{I|L}S]}G{I|L}VYTVGGK;{[TV]|[{I|L}S]}GVY{I|L}TVNK;{[TV]|[{I|L}S]}GV{I|L}YE{I|L}S{I|L};{[TV]|[{I|L}S]}G{I|L}VY[NS]{I|L}K;{[TV]|[{I|L}S]}GV{I|L}YTVGGK 6.9987;6.7099;6.5236;6.2348;6.1728;6.1599;6.0457;5.884;5.8839;5.8712 -;-;-;-;-;-;-;-;-;- 5717 1 1.461 118619.2 1.0 10498 5640 16130 HBL1_DMSO_200M_050219_1,16140 HBL1_DMSO_200M_050219_1,16140,TVLEKVYEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16141 78.469 66.0 1626900.0 25 0 113340.0 + 39920 VFQYRLVEY 9 89 608.8229406503855 1215.6313283675709 2 608.8228637576103 MULTI CID FTMS 0 0 0 16130 772283.4375 0.6549170608577961 -1 0.0967330932617187 11 Unmodified _VFQYRLVEY_ ENSG00000163877|ENST00000296215|SNIP1 79.59630418116434 0.0176145593575188 3 V{M(Oxidation (M))|F}Y{I|L}RYV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 4 + 66.091 0.0 0.0 5.4368 5.4368 86.389 0.0 0.0 0.0 9.258337024346176 9.258337024346176 9.258337024346176 9.258337024346176 0 1.274227503252014 1.0 0.7302046884880937 0.6203715150305281 V{M(Oxidation (M))|F}Y{I|L}RYV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{M(Oxidation (M))|F}V]KYR{I|L}VEY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VYR{I|L}VEY;[{M(Oxidation (M))|F}V]KYR{I|L}EVY;V{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}[{I|L}V][TA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};V{M(Oxidation (M))|F}Y{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[NG]{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}YR{I|L}VEY;V{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NG]{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VYR{I|L}EVY;V{M(Oxidation (M))|F}Y{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[KT][PA] 5.4368;4.6752;4.0497;3.787;3.5119;3.303;3.2959;3.2631;3.1615;2.8824 -;-;-;-;-;-;-;-;-;- 457 + 1 1.461 83494.3 1.0 10499 5640 16130 HBL1_DMSO_200M_050219_1,16141 HBL1_DMSO_200M_050219_1,16141,VFQYRLVEY True True VFQYRLVEY 78.468533 608.82286375761 10267691.0 16130.0 ENSG00000163877|ENST00000296215|SNIP1 7.085409959157308 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16142 78.47 82.0 630550.0 25 0 78326.0 + 25788 NKIDLYDEL 9 77 561.7870992805024 1121.559645627805 2 561.7872802615166 MULTI CID FTMS 0 0 0 16130 732653.9375 0.3873550458155973 -1 0.0967330932617187 12 Unmodified _NKIDLYDEL_ REV__ENSG00000184908|ENST00000375679|CLCNKB;REV__ENSG00000186510|ENST00000331433|CLCNKA;REV__nc|ENSG00000186510|P51800-2|CLCNKA;REV__nc|ENSG00000186510|P51800-3|CLCNKA 11.517880264261096 0.5249077435482886 3 [KQ]VDY{I|L}DE{I|L} 9 -1 + 62.986 0.0 0.0 5.6159 5.6159 84.576 0.0 0.0 0.0 7.024597658517052 52.52849272132933 7.024597658517052 7.658467447160987 0 0.4247425010840047 0.0 0.4247425010840047 0.2887254899964357 [KQ]VDY{I|L}DE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KDY{I|L}DE{I|L};[KQ]VDYEEV{I|L};{[QN]|[E{I|L}]|[KN]}D[Y{I|L}]{I|L}DE{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{[QN]|[E{I|L}]|[KN]}{I|L}DE{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{[QN]|[E{I|L}]|[KN]}{I|L}DE{I|L};{[YD]|[{M(Oxidation (M))|F}M]}V[KQ]{I|L}DE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KDYEEV{I|L};{[QN]|[E{I|L}]|[KN]}D[Y{I|L}]EEV{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{[QN]|[E{I|L}]|[KN]}EEV{I|L} 5.6159;4.9331;3.9441;3.8448;3.6509;3.5983;3.5395;3.2613;2.1729;1.979 -;-;-;-;-;-;-;-;-;- 211 1 1.461 44170.9 1.0 10500 5640 16130 HBL1_DMSO_200M_050219_1,16142 HBL1_DMSO_200M_050219_1,16142,NKIDLYDEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16143 78.474 187.0 1190400.0 25 0 147450.0 + 22504 LPVRPGLI 8 138 432.7867198579895 863.5588867827789 2 432.7870056033134 MULTI CID FTMS 0 0 0 16130 506068.125 0.61933809502684 -7 0.630950927734375 13 Unmodified _LPVRPGLI_ REV__ENSG00000173473|ENST00000254480|SMARCC1 30.22481116460888 0.4082965392918993 3 {I|L}P{I|L} 3 -1 48.5 0.0 0.0 5.6163 0.0 0.0 0.0 537.3162935846311 537.3162935846311 33.895840698003 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}P{I|L} 5.6163 - 358 + 1 1.461 172229.2 1.0 10501 5640 16130 HBL1_DMSO_200M_050219_1,16143 HBL1_DMSO_200M_050219_1,16143,LPVRPGLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16144 78.477 173.0 1020700.0 25 0 158810.0 + 6103 DSRTFITI 8 137 476.7585082405048 951.5024635478096 2 476.7585632205009 MULTI CID FTMS 0 0 0 16130 473346.9375 0.2482801466323132 -3 0.280487060546875 14 Unmodified _DSRTFITI_ ENSG00000034152|ENST00000342679|MAP2K3;nc|ENSG00000034152|P46734-2|MAP2K3;nc|ENSG00000034152|P46734-3|MAP2K3 49.93300154707207 0.1395624531867191 3 T{M(Oxidation (M))|F}{I|L}T{I|L} 5 3 51.331 0.0 0.0 5.3947 0.0 0.0 358.1593495099625 0.0 358.1593495099625 0.0 14.107485492060604 0.0 0.0 0 0.9247425010840048 0.0 0.7134679910804405 0.0 + T{M(Oxidation (M))|F}{I|L}T{I|L} 5.3947 + + 1603 1 1.461 135769.8 1.0 10502 5640 16130 HBL1_DMSO_200M_050219_1,16144 HBL1_DMSO_200M_050219_1,16144,DSRTFITI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16145 78.482 261.0 817650.0 25 0 73605.0 + + 7352 NAAIIMKI 8 146 437.7566746130363 873.4987962928726 2 437.7568847537041 MULTI CID FTMS 0 0 0 16130 441867.125 0.3524313661330651 -1 0.0967330932617187 15 Unmodified _EGAIMLLK_ ENSG00000197045|ENST00000358056|GMFB;ENST00000554682.1_1_14:54948855-54955663:-|nuORF;ENST00000554163.5_1_14:54948056-54950476:-|nuORF 32.30548876998284 0.3644845974844379 3 {[DA]|[EG]}A{I|L}{I|L}MK{I|L} 8 -1 + 80.17 0.0 0.0 9.178 9.178 92.097 0.0 0.0 0.0 22.764209843288903 6.863808770279988 6.863808770279988 6.863808770279988 0 1.774227503252014 2.0 0.0 0.2742275032520141 {[DA]|[EG]}A{I|L}{I|L}MK{I|L};{[DA]|[EG]}A{I|L}{I|L}M{I|L}K 9.178;8.3922 -;- 353 + 1 1.461 164905.8 1.0 10503 5640 16130 HBL1_DMSO_200M_050219_1,16145 HBL1_DMSO_200M_050219_1,16145,EGAIMLLK False False NAAIIMKI 78.482198 437.756884753704 0.0 16130.0 ENSG00000197045|ENST00000358056|GMFB;;ENST00000554682.1_1_14:54948855-54955663:-|nuORF;;ENST00000554163.5_1_14:54948056-54950476:-|nuORF 0.7424545337756475 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16146 78.487 252.0 1003000.0 25 0 140660.0 + 45739 YYIGDIHPSDL 11 159 646.8116964948168 1291.6088400564336 2 646.8118163943291 MULTI CID FTMS 0 0 0 16130 418705.46875 0.470874277394689 -1 0.0967330932617187 16 Unmodified _YYIGDIHPSDL_ ENSG00000103018|ENST00000307892|CYB5B;ENST00000514123.5_1_16:69458586-69482095:+|nuORF;ENST00000568342.2_1_16:69481073-69493037:+|nuORF 69.10491478415734 0.0349985100263309 3 YY{I|L}GPY{I|L}GD 9 6 84.211 0.0 0.0 6.5199 0.0 0.0 0.0 247.1201140059595 247.1201140059595 64.88927116334646 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.341129063296272 0.0 YY{I|L}GPY{I|L}GD 6.5199 - 3301 + 1 1.461 187000.4 1.0 10504 5640 16130 HBL1_DMSO_200M_050219_1,16146 HBL1_DMSO_200M_050219_1,16146,YYIGDIHPSDL True True YYIGDIHPSDL 78.486908 646.811816394329 6526943.5 16130.0 ENST00000568342.2_1_16:69481073-69493037:+|nuORF;;ENSG00000103018|ENST00000307892|CYB5B;;ENST00000514123.5_1_16:69458586-69482095:+|nuORF 2.5169848203659058 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16147 78.49 166.0 799890.0 25 0 90744.0 + 22422 LPTFVRSI 8 128 466.7813250399784 931.5480971467568 2 466.7822448611259 MULTI CID FTMS 0 0 0 16130 378763.40625 0.5455341508494368 4 -0.3609390258789062 17 Unmodified _LPTFVRSI_ ENSG00000156515|ENST00000359426|HK1;ENST00000494253.1_1_10:71098016-71144300:+|nuORF;nc|ENSG00000156515|P19367-2|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156515|P19367-4|HK1 47.74868867922204 0.1498366402366518 3 {I|L}PT{M(Oxidation (M))|F}VRS{I|L} 8 0 + 81.491 0.0 0.0 8.7479 8.7479 89.306 0.0 0.0 0.0 36.40978057358331 4.586378490256493 4.586378490256493 4.586378490256493 0 0.805462187404089 2.0 0.3494850021680094 0.25 + + {I|L}PT{M(Oxidation (M))|F}VRS{I|L};{I|L}PT{M(Oxidation (M))|F}VRTV;{I|L}P{M(Oxidation (M))|F}VTRS{I|L};{I|L}P{M(Oxidation (M))|F}VTRTV;{I|L}P[YR][{I|L}A]S{I|L};{I|L}{I|L}MTVRS{I|L};{I|L}P[YR][{I|L}A]TV;{I|L}{I|L}MTVRTV;{I|L}{I|L}MVTRS{I|L};{I|L}{I|L}MVTRTV 8.7479;8.2556;6.006;5.5137;3.6199;3.5024;3.1275;3.01;2.752;2.2597 +;-;-;-;-;-;-;-;-;- + 319 + 1 1.461 104061.5 1.0 10505 5640 16130 HBL1_DMSO_200M_050219_1,16147 HBL1_DMSO_200M_050219_1,16147,LPTFVRSI False True LPTFVRSI 78.49015 466.782244861126 23312902.0 16130.0 nc|ENSG00000156515|P19367-2|HK1;;ENST00000494253.1_1_10:71098016-71144300:+|nuORF;;nc|ENSG00000156515|P19367-4|HK1;;nc|ENSG00000156515|P19367-3|HK1;;ENSG00000156515|ENST00000359426|HK1 4.2659912109375 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16148 78.501 596.0 1197200.0 25 0 124270.0 + 42848 VVLGEFGVRNV 11 229 594.8403079034211 1187.6660628736422 2 594.8422119021416 MULTI CID FTMS 0 0 0 16130 348284.28125 0.0683501919602573 -3 0.280487060546875 18 Unmodified _VVLGEFGVRNV_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 147.24064527209634 0.0010718819277248 3 VV{I|L}GE{M(Oxidation (M))|F}GVRNV 11 0 + 146.72 0.0 0.0 12.353 12.353 93.069 0.0 0.0 0.0 107.66410329770318 14.133582688895784 14.133582688895784 7.129843661361406 0 2.590263930268895 2.0 1.3283409326844269 2.059894379144197 + + VV{I|L}GE{M(Oxidation (M))|F}GVRNV;VVVAE{M(Oxidation (M))|F}GVRNV;VV{I|L}GE{M(Oxidation (M))|F}VGRNV;VV{I|L}GE{M(Oxidation (M))|F}GVRGGV;VV{I|L}G{M(Oxidation (M))|F}EGVRNV;VV{I|L}GEV{M(Oxidation (M))|F}GRNV;VVVAE{M(Oxidation (M))|F}VGRNV;VVVAE{M(Oxidation (M))|F}GVRGGV;VVVA{M(Oxidation (M))|F}EGVRNV;VV{I|L}GE{M(Oxidation (M))|F}GVRAAA 12.353;11.753;11.478;11.417;11.187;11.076;10.878;10.817;10.587;10.572 +;-;-;-;-;-;-;-;-;- + 113606 + 1 1.461 517905.8 1.0 10506 5640 16130 HBL1_DMSO_200M_050219_1,16148 HBL1_DMSO_200M_050219_1,16148,VVLGEFGVRNV True True VVLGEFGVRNV 78.500581 594.842211902142 167589632.0 16130.0 nc|ENSG00000171453|O15160-2|POLR1C;;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;;ENSG00000171453|ENST00000642195|POLR1C 8.327126502990723 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16149 78.511 589.0 497340.0 25 0 76519.0 8341 ERRELPRIIT 10 215 641.8822122364909 1281.7498715397817 2 641.8826782107353 MULTI CID FTMS 0 0 0 16130 342755.875 0.1994947238842455 9 -0.7443695068359375 19 Unmodified _ERRELPRIIT_ nc|ENSG00000196440|Q5H9R4-2|ARMCX4;nc|ENSG00000196440|Q5H9R4-3|ARMCX4 5.296884461304476 0.7021353017287152 3 {I|L} 1 9 10.278 0.0 0.0 0.80184 0.0 0.0 1150.6550514487644 0.0 1150.6550514487644 0.0 0.1275223257201574 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.80184 + + 681 + 1 1.461 221703.9 1.0 10507 5640 16130 HBL1_DMSO_200M_050219_1,16149 HBL1_DMSO_200M_050219_1,16149,ERRELPRIIT False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16150 78.521 592.0 514120.0 25 0 35982.0 + 26735 NYYPYTITEY 10 222 663.7979489068186 1325.5813448804372 2 663.7977172732353 MULTI CID FTMS 0 0 0 16130 342594.09375 0.0626131467486658 4 -0.3609390258789062 20 Unmodified _NYYPYTITEY_ ENSG00000154217|ENST00000581322|PITPNC1;nc|ENSG00000154217|Q9UKF7-2|PITPNC1 88.95385435242217 0.009729780394035 3 [YN]YP[YT]{I|L} 7 3 41.022 0.0 0.0 3.0946 0.0 0.0 0.0 408.1396694256122 408.1396694256122 -1.378742136677232 0.0 -1.378742136677232 0.0 0 0.7059771852360797 1.6989700043360187 0.7302046884880937 0.5189301784845296 + [YN]YP[YT]{I|L} 3.0946 + + 5560 1 1.461 219079.6 1.0 10508 5640 16130 HBL1_DMSO_200M_050219_1,16150 HBL1_DMSO_200M_050219_1,16150,NYYPYTITEY True True NYYPYTITEY 78.521271 663.797717273235 105076740.0 16130.0 nc|ENSG00000154217|Q9UKF7-2|PITPNC1;;ENSG00000154217|ENST00000581322|PITPNC1 7.522636731465657 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16152 78.526 25.0 2529600.0 25 0 231030.0 + 27028 PENFAIPMTI 10 87 566.790784638343 1131.567016343486 2 566.7919799685478 MULTI CID FTMS 0 0 0 16151 1725615.375 1.0 0 0.0 1 Unmodified _PENFAIPMTI_ REV__ENSG00000130703|ENST00000313733|OSBPL2;REV__nc|ENSG00000130703|Q9H1P3-2|OSBPL2 13.90604991867851 0.6142120002215601 3 [EP]{I|L}K{I|L}T 6 -1 28.689 0.0 0.0 2.5353 0.0 0.0 0.0 447.13638825194215 447.13638825194215 -0.5856603109469738 0.0 -0.5856603109469738 0.0 0 0.0 0.8538719643217619 0.3494850021680094 0.0 [EP]{I|L}K{I|L}T 2.5353 - 119 1 1.461 57579.3 1.0 10509 5641 16151 HBL1_DMSO_200M_050219_1,16152 HBL1_DMSO_200M_050219_1,16152,PENFAIPMTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16153 78.527 27.0 2197800.0 25 0 257060.0 14405 IFIFHSWIL 9 81 588.3355207439473 1174.6564885546943 2 588.3361083865166 MULTI CID FTMS 0 0 0 16151 2356665.5 1.0 0 0.0 2 Unmodified _IFIFHSWIL_ nc|nan|O96002|CXorf1 4.3292370932331545 0.7635526921153418 3 {M(Oxidation (M))|F} 1 8 13.099 0.0 0.0 1.1151 0.0 0.0 1009.5772782048884 0.0 1009.5772782048884 0.0 7.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.1151 + + 32 + 1 1.461 49385.7 1.0 10510 5641 16151 HBL1_DMSO_200M_050219_1,16153 HBL1_DMSO_200M_050219_1,16153,IFIFHSWIL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16154 78.528 7.4 7200800.0 25 0 746080.0 + 12068 GQFGVGFYSA 10 93 516.7428630922087 1031.4711732512174 2 516.7433349490166 MULTI CID FTMS 0 0 0 16151 8908917.0 1.0 0 0.0 3 Unmodified _GQFGVGFYSA_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENSG00000126602|ENST00000246957|TRAP1;ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000573872.5_1_16:3721765-3727644:-|nuORF;ENST00000575854.5_1_16:3724861-3727653:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000126602|Q12931-2|TRAP1;nc|ENSG00000282100|Q58FF6|HSP90AB4P 58.6788170122104 0.0400518768368984 3 [AG]GVHDRYSA 10 5 [AG]GVHD + + 27.984 7.2106 1.3447 2.7131 2.7131 49.688 0.0 0.0 0.0 0.0 12.2339875624709 0.0 0.0 0 0.3807196863200844 0.0 0.5891368308784531 0.2614393726401688 [AG]GVHDRYSA 2.7131 - 271 + 1 1.461 47993.0 1.0 10511 5641 16151 HBL1_DMSO_200M_050219_1,16154 HBL1_DMSO_200M_050219_1,16154,GQFGVGFYSA True True GQFGVGFYSA 78.527873 516.743334949017 45376272.0 16151.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENSG00000126602|ENST00000246957|TRAP1;;ENST00000573872.5_1_16:3721765-3727644:-|nuORF;;ENST00000575854.5_1_16:3724861-3727653:-|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1;;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;;nc|ENSG00000126602|Q12931-2|TRAP1;;nc|ENSG00000282100|Q58FF6|HSP90AB4P;;ENSG00000166598|ENST00000299767|HSP90B1 8.408868789672852 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16155 78.529 28.0 794090.0 25 0 71250.0 + 25798 NKLYQCVVKI 10 52 604.3483448405694 1206.6821367479388 2 604.3487426638603 MULTI CID FTMS 0 0 0 16151 2283183.75 1.0 0 0.0 4 Unmodified _NKLYQCVVKI_ REV__ENSG00000137509|ENST00000313010|PRCP;REV__nc|ENSG00000137509|P42785-2|PRCP 0.6268255596534771 0.7237370565709429 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.461 21892.9 1.0 10512 5641 16151 HBL1_DMSO_200M_050219_1,16155 HBL1_DMSO_200M_050219_1,16155,NKLYQCVVKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16156 78.53 37.0 1618500.0 25 0 178500.0 + 13658 HPVSALMEI 9 77 498.76249832615713 995.5104437191144 2 498.7629882693291 MULTI CID FTMS 0 0 0 16151 1558708.25 1.0 0 0.0 5 Unmodified _HPVSALMEI_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON 60.38955033654506 0.025866396858536 3 [VP]{[SA]|[TG]}H{I|L}ME{I|L} 9 2 + 55.258 0.0 0.0 5.5507 5.5507 83.78 0.0 0.0 0.0 4.628618393527404 26.39610580268134 4.628618393527404 6.817496819840656 0 0.5102396519197265 0.0 1.7302046884880935 0.0 [VP]{[SA]|[TG]}H{I|L}ME{I|L};[VP]{[SA]|[TG]}{I|L}HME{I|L};{[QN]|[E{I|L}]|[KN]}[KP]HME{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YT]{I|L}ME{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]A{I|L}M{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]A[YV]E{I|L};{[QN]|[E{I|L}]|[KN]}[KC][YV]E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[ET]|[MV]}{I|L}M{M(Oxidation (M))|F}{I|L};[VP]{[SA]|[TG]}H[EP]{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[ET]|[MV]}[YV]E{I|L} 5.5507;4.8659;4.8199;4.4207;3.769;3.5093;3.0177;2.5752;2.5238;2.3156 -;-;-;-;-;-;-;-;-;- 241 1 1.461 47496.2 1.0 10513 5641 16151 HBL1_DMSO_200M_050219_1,16156 HBL1_DMSO_200M_050219_1,16156,HPVSALMEI True True HPVSALMEI 78.530231 498.762988269329 11609729.0 16151.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-9|SON 3.109734376271566 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16157 78.531 38.0 1197400.0 25 0 84093.0 26991 PEIELLRLEL 10 57 612.861887491582 1223.709222049964 2 612.8619262576103 MULTI CID FTMS 0 0 0 16151 1325266.0 1.0 0 0.0 6 Unmodified _PEIELLRLEL_ ENSG00000214114|ENST00000397572|MYCBP;ENST00000465771.3_1_1:39330344-39338266:-|nuORF;ENST00000495043.5_1_1:39330344-39338774:-|nuORF 10.073929032068715 0.6785112666868882 3 [EP]{I|L} 3 7 19.666 0.0 0.0 1.6071 0.0 0.0 0.0 881.5062856088108 881.5062856088108 8.475052728044547 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 + [EP]{I|L} 1.6071 + + 34 1 1.461 40108.8 1.0 10514 5641 16151 HBL1_DMSO_200M_050219_1,16157 HBL1_DMSO_200M_050219_1,16157,PEIELLRLEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16158 78.533 76.0 1027500.0 25 0 108240.0 + 2303 AQIEDLQVKL 10 115 578.8318556235142 1155.6491583138284 2 578.8328124880791 MULTI CID FTMS 0 0 0 16151 849979.75 0.3742015147377825 -2 0.166778564453125 7 Unmodified _AQIEDLQVKL_ ENSG00000157933|ENST00000378536|SKI 40.23920728925047 0.1550410903091231 3 {[QN]|[E{I|L}]|[KN]}DQ{I|L}VK[Q{I|L}]A 10 6 + 55.591 0.0 0.0 4.8104 4.8104 74.622 0.0 0.0 0.0 4.057653461839941 5.331300347010128 4.057653461839941 1.7609125905568137 0 0.0 0.958607314841775 0.6307196863200843 0.7302046884880937 {[QN]|[E{I|L}]|[KN]}DQ{I|L}VK[Q{I|L}]A;{[QN]|[E{I|L}]|[KN]}DQV{I|L}K[Q{I|L}]A;{[QN]|[E{I|L}]|[KN]}NE{I|L}VK[Q{I|L}]A;[Q{I|L}]DE{I|L}VK[Q{I|L}]A;{[QN]|[E{I|L}]|[KN]}NEV{I|L}K[Q{I|L}]A;[Q{I|L}]DEV{I|L}K[Q{I|L}]A;{[QV]|[N{I|L}]|[RA]|[KV]}EE{I|L}VK[Q{I|L}]A;{[QN]|[E{I|L}]|[KN]}D[AG]{I|L}VK[Q{I|L}]A;{[QV]|[N{I|L}]|[RA]|[KV]}EEV{I|L}K[Q{I|L}]A;{[QN]|[E{I|L}]|[KN]}D[AG]V{I|L}K[Q{I|L}]A 4.8104;4.658;4.5499;4.4593;4.3975;4.3069;4.1002;4.0174;3.9478;3.865 -;-;-;-;-;-;-;-;-;- 683 1 1.461 63409.7 1.0 10515 5641 16151 HBL1_DMSO_200M_050219_1,16158 HBL1_DMSO_200M_050219_1,16158,AQIEDLQVKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16159 78.535 94.0 416620.0 25 0 110820.0 + -1 RLLQLMKWLH 10 63 677.3950840275277 1352.7756151218553 2 677.3956786990166 MULTI CID FTMS 0 0 0 16151 836099.4375 1.0 0 0.0 8 Oxidation (M) _RLLQLM(Oxidation (M))KWLH_ REV__ENST00000550519.5_1_12:56575573-56579941:-|nuORF;REV__ENST00000550859.5_1_12:56575573-56583167:-|nuORF 0.4007161486938917 0.7247829448918255 3 S 1 -1 2.4743 0.0 0.0 0.1829 0.0 0.0 842.3586362173615 420.3728731744751 1262.7315093918369 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.1829 - 3 + 1 1.461 46728.4 1.0 10516 5641 16151 HBL1_DMSO_200M_050219_1,16159 HBL1_DMSO_200M_050219_1,16159,RLLQLMKWLH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16160 78.537 66.0 1059400.0 25 0 184910.0 + -1 SLKFRLLLC 9 83 575.3450823112596 1148.675611689319 2 575.3459960818291 MULTI CID FTMS 0 0 0 16151 842477.375 0.8624299064942205 -1 0.0700454711914062 9 Carbamidomethyl (C) _SLKFRLLLC(Carbamidomethyl (C))_ REV__nc|ENSG00000188175|A8MVW5-3|HEPACAM2 2.059750862983233 0.8427793054688888 3 MME{M(Oxidation (M))|F} 4 -1 22.639 0.0 0.0 1.9709 0.0 0.0 592.5061303434192 0.0 592.5061303434192 0.0 11.38021560115302 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 MME{M(Oxidation (M))|F} 1.9709 - 46 + 1 1.461 56734.2 1.0 10517 5641 16151 HBL1_DMSO_200M_050219_1,16160 HBL1_DMSO_200M_050219_1,16160,SLKFRLLLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16161 78.539 85.0 723660.0 25 0 83396.0 + 12225 GQVGHILEL 9 96 483.2755505213062 964.5365481094124 2 483.2744933962822 MULTI CID FTMS 0 0 0 16151 652589.875 0.5923898150670732 -2 0.166778564453125 10 Unmodified _GQVGHILEL_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 15.847184025352805 0.4077185912009129 3 {[QG]|[NA]}RH{I|L}{I|L}E{I|L} 8 2 + 21.062 0.0 0.0 2.1836 2.1836 69.811 0.0 0.0 0.0 1.368865538569466 7.728787452803372 1.368865538569466 2.5269751594335297 0 0.5370156338638594 0.0 0.0 0.3807196863200844 {[QG]|[NA]}RH{I|L}{I|L}E{I|L};{[HG]|PP}V{I|L}{I|L}{[QG]|[NA]}E{I|L};{[HG]|PP}V{I|L}{[QG]|[NA]}{I|L}E{I|L};[{I|L}P][HM]{I|L}{I|L}E{I|L};{[HG]|PP}{I|L}V{[QG]|[NA]}{I|L}E{I|L};{[HG]|PP}{I|L}V{I|L}{[QG]|[NA]}E{I|L};[H{I|L}]GV{[QG]|[NA]}{I|L}E{I|L};[H{I|L}]GV{I|L}{[QG]|[NA]}E{I|L};{[HG]|PP}V{[QG]|[NA]}{I|L}{I|L}E{I|L};[AG]GRH{I|L}{I|L}E{I|L} 2.1836;1.9216;1.9216;1.71;1.6095;1.6095;1.4269;1.4269;1.4269;1.4237 -;-;-;-;-;-;-;-;-;- 376 1 1.461 51545.9 1.0 10518 5641 16151 HBL1_DMSO_200M_050219_1,16161 HBL1_DMSO_200M_050219_1,16161,GQVGHILEL False True GQVGHILEL 78.538731 483.274493396282 20964670.0 16151.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 2.882941444714864 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16162 78.542 165.0 510370.0 25 0 58628.0 + 21356 LPFLRVFKF 9 123 583.8601322787451 1165.7057116242902 2 583.8600952029228 MULTI CID FTMS 0 0 0 16151 512734.9375 1.0 0 0.0 11 Unmodified _LPFLRVFKF_ REV__ENSG00000111361|ENST00000424014|EIF2B1 5.230669730166228 0.7320841359114558 3 [Y{I|L}][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{[HG]|PP}{I|L} 7 -1 17.235 0.0 0.0 1.4785 0.0 0.0 0.0 272.2918819134598 272.2918819134598 3.0786942019428665 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{[HG]|PP}{I|L} 1.4785 - 185 1 1.461 67211.5 1.0 10519 5641 16151 HBL1_DMSO_200M_050219_1,16162 HBL1_DMSO_200M_050219_1,16162,LPFLRVFKF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16163 78.552 545.0 264450.0 25 0 17443.0 -1 0 136 994.4471506849866 1986.879748436773 2 994.9499999880792 MULTI CID FTMS 0 0 0 16151 361453.59375 0.8034114780480679 5 -0.4547958374023437 12 3 [YQ]{I|L}ENY[WE]NEP 11 -1 47.688 0.0 0.0 2.4001 0.0 0.0 0.0 518.2572583839373 518.2572583839373 -1.503373306028486 0.0 -1.503373306028486 0.0 0 0.0 1.3010299956639813 0.0 2.004432191740108 [YQ]{I|L}ENY[WE]NEP 2.4001 - 12236 1 1.461 97504.5 1.0 10520 5641 16151 HBL1_DMSO_200M_050219_1,16163 HBL1_DMSO_200M_050219_1,16163, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16164 78.554 117.0 610220.0 25 0 65847.0 + 43074 VYKVGIAF 8 111 448.7655633929418 0 448.7657653689384 PEAK CID FTMS 0 0 0 16151 376965.21875 1.0 0 0.0 13 Unmodified _VYKVGIAF_ ENSG00000198265|ENST00000358691|HELZ;ENST00000582864.1_1_17:65184426-65184723:-|nuORF;nc|ENSG00000198265|P42694-2|HELZ 34.18733598223924 0.1926487934498573 3 {I|L}RGY 4 7 17.423 0.0 0.0 1.9456 0.0 0.0 335.1845558856899 68.05138574771718 403.2359416334071 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}RGY 1.9456 - 324 + 1 1.461 57697.8 1.0 10521 5641 16151 HBL1_DMSO_200M_050219_1,16164 HBL1_DMSO_200M_050219_1,16164,VYKVGIAF False True VYKVGIAF 78.554016 448.765765368938 2606621.75 16151.0 ENST00000582864.1_1_17:65184426-65184723:-|nuORF;;nc|ENSG00000198265|P42694-2|HELZ;;ENSG00000198265|ENST00000358691|HELZ 1.059225618839264 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16165 78.564 556.0 216180.0 25 0 21890.0 + 16141 ITVARSLDRRL 11 164 650.3958756015004 1298.7771982698007 2 650.3971435427666 MULTI CID FTMS 0 0 0 16151 374824.375 0.2159235882979963 8 -0.6743240356445312 14 Unmodified _ITVARSLDRRL_ REV__ENSG00000120616|ENST00000319778|EPC1;REV__ENST00000495790.1_1_10:32581422-32635732:-|nuORF;REV__nc|ENSG00000120616|Q9H2F5-3|EPC1;REV__nc|ENSG00000120616|Q9H2F5|EPC1 24.020572477871973 0.5281922720044371 3 [{I|L}T]G{I|L}T{M(Oxidation (M))|F} 6 -1 49.173 0.0 0.0 3.7861 0.0 0.0 0.0 663.3975345337257 663.3975345337257 31.186016213614327 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.7312958898387063 0.0 [{I|L}T]G{I|L}T{M(Oxidation (M))|F} 3.7861 - 990 1 1.461 93113.2 1.0 10522 5641 16151 HBL1_DMSO_200M_050219_1,16165 HBL1_DMSO_200M_050219_1,16165,ITVARSLDRRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16166 78.566 123.0 546470.0 25 0 38078.0 + 39818 VEVEMEIRL 9 84 559.2975076911139 1116.5804624490277 2 559.2977172732353 MULTI CID FTMS 0 0 0 16151 375169.875 1.0 0 0.0 15 Unmodified _VEVEMEIRL_ REV__ENSG00000176531|ENST00000292140|PHLDB3;REV__ENST00000596902.1_1_19:44005819-44008744:-|nuORF;REV__nc|ENSG00000176531|Q6NSJ2-2|PHLDB3 26.88365393820708 0.1891292719743517 3 {NN|[MP]|[D{I|L}]|[EV]}V[KC][DG]R{I|L}V 10 -1 + 45.198 0.0 0.0 4.0479 4.0479 72.83 0.0 0.0 0.0 18.555293429214714 4.259687322722812 4.259687322722812 2.0546874062760168 0 0.3807196863200844 2.0 0.8807196863200843 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}V[KC][DG]R{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}PE[{M(Oxidation (M))|F}E]R{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}V[KC][DG]RV{I|L};{NN|[MP]|[D{I|L}]|[EV]}PE[{M(Oxidation (M))|F}E]RV{I|L};{NN|[MP]|[D{I|L}]|[EV]}PE[{M(Oxidation (M))|F}E][VG]{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}HH{NN|[MP]|[D{I|L}]|[EV]}R{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}PE[{M(Oxidation (M))|F}E][VG]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}PE[{M(Oxidation (M))|F}E][{I|L}V]R;{NN|[MP]|[D{I|L}]|[EV]}HH{NN|[MP]|[D{I|L}]|[EV]}RV{I|L};{[TV]|[{I|L}S]}[{I|L}P][MT]EV{NN|[MP]|[D{I|L}]|[EV]} 4.0479;3.8639;3.6664;3.4824;3.0392;2.8815;2.6578;2.6458;2.5;1.8661 -;-;-;-;-;-;-;-;-;- 145 + 1 1.461 60190.8 1.0 10523 5641 16151 HBL1_DMSO_200M_050219_1,16166 HBL1_DMSO_200M_050219_1,16166,VEVEMEIRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16167 78.569 103.0 580140.0 25 0 71916.0 + 37415 TLAWIWLL 8 107 508.30395405602974 1014.5933551788596 2 508.3055602908134 MULTI CID FTMS 0 0 0 16151 345215.0 0.665650895785306 3 -0.2908935546875 16 Unmodified _TLAWIWLL_ REV__ENST00000533331.5_1_11:14535061-14541920:-|nuORF 19.438996006549623 0.6237395211498085 3 {[QN]|[E{I|L}]|[KN]}KV{I|L}[DV]S{I|L} 9 -1 + 52.615 0.0 0.0 5.1858 5.1858 82.047 0.0 0.0 0.0 7.870156338638594 14.71726222832956 7.870156338638594 6.478174818886373 0 0.3807196863200844 1.2218487496163564 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}KV{I|L}[DV]S{I|L};{[QN]|[E{I|L}]|[KN]}KV{I|L}[WD]{I|L};{[QN]|[E{I|L}]|[KN]}KV[TA]{[QN]|[E{I|L}]|[KN]}{I|L};[{I|L}T]A[{I|L}A]{I|L}[DV]S{I|L};[{I|L}T][VG]V{I|L}[DV]S{I|L};[{I|L}T][RV]{I|L}[DV]S{I|L};[{I|L}T]A[{I|L}A]{I|L}[WD]{I|L};{[QN]|[E{I|L}]|[KN]}K[NP][KS]S{I|L};{[QN]|[E{I|L}]|[KN]}KV[PG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L};[{I|L}T][VG]V{I|L}[WD]{I|L} 5.1858;4.5473;4.4799;4.4101;4.1524;3.9789;3.7663;3.686;3.6344;3.5086 -;-;-;-;-;-;-;-;-;- 731 1 1.461 52928.8 1.0 10524 5641 16151 HBL1_DMSO_200M_050219_1,16167 HBL1_DMSO_200M_050219_1,16167,TLAWIWLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16168 78.573 236.0 220230.0 25 0 9151.7 -1 0 80 764.6906592567759 2291.0501483705275 3 764.6895629763603 MULTI CID FTMS 0 0 0 16151 326289.4375 1.0 0 0.0 17 3 [MD]PN{I|L} 5 -1 49.08 0.0 0.0 2.1423 0.0 0.0 0.0 1717.779357437209 1717.779357437209 27.653631197717985 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.4247425010840047 [MD]PN{I|L} 2.1423 - 109 + 1 1.461 44655.9 1.0 10525 5641 16151 HBL1_DMSO_200M_050219_1,16168 HBL1_DMSO_200M_050219_1,16168, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16169 78.581 402.0 349740.0 25 0 28798.0 + 13624 HPPSHWPLI 9 164 361.8625122798878 1082.5657074398634 3 361.8626281619072 MULTI CID FTMS 0 0 0 16151 294404.40625 0.314886809164898 -6 0.5281295776367188 18 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 21.74664581756881 0.2544899275067181 3 [{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L} 9 5 + 22.452 0.0 0.0 2.0739 2.0739 68.511 0.0 0.0 0.0 3.7672855285079656 4.449237304209891 3.7672855285079656 1.7609125905568137 0 0.2742275032520141 1.6989700043360187 0.0 0.0 [{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[SA]|[TG]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HWP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]HWP{I|L}{I|L};{[SA]|[TG]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WPH{I|L}{I|L};[{I|L}P]KV[DV]SYY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]WPH{I|L}{I|L};[{I|L}P]KV[VS]DYY;{[SA]|[TG]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]WHP{I|L}{I|L} 2.0739;1.9113;1.6251;1.5535;1.1868;1.1441;1.1153;1.0287;1.0242;0.95263 -;-;-;+;-;-;-;-;-;- + 462 1 1.461 118522.5 1.0 10526 5641 16151 HBL1_DMSO_200M_050219_1,16169 HBL1_DMSO_200M_050219_1,16169,HPPSHWPLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16170 78.595 800.0 378250.0 25 0 43310.0 + 15436 IPPSFASI 8 265 416.2340420304462 830.4535311276924 2 416.2340576052666 MULTI CID FTMS 0 0 0 16151 254643.0 0.3806267397448243 -6 0.5281295776367188 19 Unmodified _IPPSFASI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 49.66892048692302 0.1408045912742846 3 {[TV]|[{I|L}S]}MPA{I|L}S{I|L} 8 5 + 50.66 0.0 0.0 6.1003 6.1003 76.911 0.0 0.0 0.0 3.1702408682765792 16.40978057358332 3.1702408682765792 0.528871982441359 0 0.805462187404089 1.0969100130080565 0.95205343810445 0.0 {[TV]|[{I|L}S]}MPA{I|L}S{I|L};{[TV]|[{I|L}S]}MPAS{I|L}{I|L};[{I|L}V][CS]P{I|L}S{I|L};[{I|L}V]G{M(Oxidation (M))|F}[VP]S{I|L};[{I|L}V][CS]PS{I|L}{I|L};{[TV]|[{I|L}S]}MAP{I|L}S{I|L};{[TV]|[{I|L}S]}MAPS{I|L}{I|L};[{I|L}V]G{M(Oxidation (M))|F}[VS]P{I|L};{[TV]|[{I|L}S]}MP{I|L}AS{I|L};{[QN]|[E{I|L}]|[KN]}WA{I|L}S{I|L} 6.1003;6.0366;5.7185;5.7132;5.6548;5.6424;5.5787;5.1937;4.992;4.8711 -;-;-;-;-;-;-;-;-;- 1247 1 1.461 230373.3 1.0 10527 5641 16151 HBL1_DMSO_200M_050219_1,16170 HBL1_DMSO_200M_050219_1,16170,IPPSFASI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16171 78.609 800.0 354040.0 25 0 29206.0 + 17242 KLLSKFYEL 9 257 380.8934159636325 1139.658418491097 3 381.2277404665947 MULTI CID FTMS 0 0 0 16151 221845.890625 1.0 0 0.0 20 Unmodified _KLLSKFYEL_ ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48;nc|ENSG00000090686|Q86UV5-8|USP48 13.614867670302877 0.4681447649821485 3 {I|L} 1 8 13.495 0.0 0.0 1.1841 0.0 0.0 1008.5634152946114 0.0 1008.5634152946114 0.0 -1.4266750356873104 -1.4266750356873104 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1841 + + 418 + 1 1.461 220378.3 0.949999988079071 10528 5641 16151 HBL1_DMSO_200M_050219_1,16171 HBL1_DMSO_200M_050219_1,16171,KLLSKFYEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16173 78.613 8.3 6712800.0 25 0 621590.0 27413 PINIVALVF 9 88 493.30750595992856 984.6004589866571 2 493.3083679080009 MULTI CID FTMS 0 0 0 16172 4912074.5 0.3343417773317535 26 -2.1128158569335938 1 Unmodified _PINIVALVF_ ENSG00000224982|ENST00000426426|TMEM233;ENST00000453450.2_1_12:120031743-120072065:+|nuORF 21.74664581756881 0.2544899275067181 3 {I|L}P 2 8 43.711 0.0 0.0 4.4395 0.0 0.0 0.0 771.4426638401087 771.4426638401087 11.115465267160538 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P 4.4395 - 256 + 1 1.465 47420.2 1.0 10529 5642 16172 HBL1_DMSO_200M_050219_1,16173 HBL1_DMSO_200M_050219_1,16173,PINIVALVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16174 78.614 15.0 3357200.0 25 0 307030.0 + 44534 YPEAITRLV 9 75 531.3029715831099 1060.5913902330196 2 531.3033935427666 MULTI CID FTMS 0 0 0 16172 2814216.5 0.9068142054373894 1 -0.0839462280273437 2 Unmodified _YPEAITRLV_ ENSG00000173039|ENST00000406246|RELA;ENST00000525693.5_1_11:65421851-65422496:-|nuORF;ENST00000531484.5_1_11:65421851-65429483:-|nuORF;nc|ENSG00000173039|Q04206-2|RELA;nc|ENSG00000173039|Q04206-3|RELA;nc|ENSG00000173039|Q04206-4|RELA 24.99096001346401 0.2132109383330889 3 YPEA{I|L}T 6 3 64.87 0.0 0.0 6.1164 0.0 0.0 0.0 383.2390841119751 383.2390841119751 37.422750325201406 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.3494850021680094 0.0 + YPEA{I|L}T 6.1164 + + 49 + 1 1.465 47462.0 1.0 10530 5642 16172 HBL1_DMSO_200M_050219_1,16174 HBL1_DMSO_200M_050219_1,16174,YPEAITRLV False True YPEAITRLV 78.61432 531.303393542767 209670192.0 16172.0 nc|ENSG00000173039|Q04206-4|RELA;;nc|ENSG00000173039|Q04206-2|RELA;;nc|ENSG00000173039|Q04206-3|RELA;;ENST00000525693.5_1_11:65421851-65422496:-|nuORF;;ENSG00000173039|ENST00000406246|RELA;;ENST00000531484.5_1_11:65421851-65429483:-|nuORF 4.92275603612264 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16175 78.616 8.0 4093700.0 25 0 604760.0 + 39686 RQIDDILSV 9 48 529.795747983749 1057.576943034298 2 529.7960082888603 MULTI CID FTMS 0 0 0 16172 2921575.0 0.4670705714884996 -3 0.2544021606445312 3 Unmodified _VEERNLLSV_ ENSG00000117448|ENST00000351829|AKR1A1;ENST00000497973.5_1_1:46032543-46034819:+|nuORF 18.1463463914782 0.3454829746528889 3 D{I|L}{I|L}W 4 7 30.433 0.0 0.0 2.8776 0.0 0.0 512.2717152326187 0.0 512.2717152326187 0.0 10.982587709797327 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L}{I|L}W 2.8776 - 23 1 1.465 32187.9 1.0 10531 5642 16172 HBL1_DMSO_200M_050219_1,16175 HBL1_DMSO_200M_050219_1,16175,VEERNLLSV False False RQIDDILSV 78.615499 529.79600828886 146111456.0 16172.0 ENSG00000117448|ENST00000351829|AKR1A1;;ENST00000497973.5_1_1:46032543-46034819:+|nuORF 5.351911783218384 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16176 78.617 21.0 1406200.0 25 0 300480.0 20100 LKEEKNRVHI 10 49 633.3689732899979 1264.7233936467958 2 633.3695556521416 MULTI CID FTMS 0 0 0 16172 1746500.125 0.5390500281755087 6 -0.5300521850585938 4 Unmodified _LKEEKNRVHI_ ENSG00000076706|ENST00000264036|MCAM;ENST00000528533.5_1_11:119181936-119187838:-|nuORF 1.4819007175156935 0.719781833666733 3 D 1 10 6.9897 0.0 0.0 0.55267 0.0 0.0 270.1790343712083 876.4889620416624 1146.6679964128707 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.55267 - 6 + 1 1.465 27272.8 1.0 10532 5642 16172 HBL1_DMSO_200M_050219_1,16176 HBL1_DMSO_200M_050219_1,16176,LKEEKNRVHI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16177 78.618 20.0 2147400.0 25 0 190180.0 + 41495 VPMPYTLKV 9 76 524.3000221582583 1046.5854913833166 2 524.2994872927666 MULTI CID FTMS 0 0 0 16172 1668155.125 0.7986556375781129 1 -0.0839462280273437 5 Unmodified _VPMPYTLKV_ ENSG00000116701|ENST00000367535|NCF2;nc|ENSG00000116701|P19878-2|NCF2;nc|ENSG00000116701|P19878-3|NCF2;nc|ENSG00000116701|P19878-4|NCF2 34.40172386719151 0.1061884637610825 3 VPMPY[{I|L}T]KV 9 0 + 43.299 0.0 0.0 4.1371 4.1371 72.345 0.0 0.0 0.0 29.96076252868369 1.0750907228502626 1.0750907228502626 1.7165906731557357 0 0.6989700043360187 1.2218487496163564 0.4247425010840047 0.0 + + VPMPY[{I|L}T]KV;VP[{M(Oxidation (M))|F}T]K[DN]KV;VPMPY{[TV]|[{I|L}S]}K{I|L};V[{M(Oxidation (M))|F}V]VK[DN]KV 4.1371;3.9731;3.8976;2.1543 +;-;-;- + 52 + 1 1.465 44064.1 1.0 10533 5642 16172 HBL1_DMSO_200M_050219_1,16177 HBL1_DMSO_200M_050219_1,16177,VPMPYTLKV True True VPMPYTLKV 78.617858 524.299487292767 30398514.0 16172.0 nc|ENSG00000116701|P19878-4|NCF2;;nc|ENSG00000116701|P19878-2|NCF2;;ENSG00000116701|ENST00000367535|NCF2;;nc|ENSG00000116701|P19878-3|NCF2 6.9544609387715655 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16178 78.619 21.0 2482500.0 25 0 310420.0 -1 IVCRMIRLL 9 87 566.8401751682837 1131.6657974033674 2 566.8407470583916 MULTI CID FTMS 0 0 0 16172 1248084.625 0.5989663971080715 -3 0.2544021606445312 6 Oxidation (M) _IVCRM(Oxidation (M))IRLL_ ENSG00000173821|ENST00000582970|RNF213;ENST00000559070.5_1_17:78261823-78310301:+|nuORF;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8-5|RNF213;nc|ENSG00000173821|Q63HN8|RNF213 18.13498045792455 0.3457906370836843 3 [EP]{I|L}KVP[HS]{I|L}{I|L} 10 -1 + 34.385 0.0 0.0 3.0385 3.0385 72.675 0.0 0.0 0.0 2.4742501084004687 9.313637641589876 2.4742501084004687 3.428345096868469 0 0.5 0.0 0.0 0.0 [EP]{I|L}KVP[HS]{I|L}{I|L};[EP]{I|L}K{I|L}T[YR]{I|L};[YR]PE{I|L}[KT]{I|L}{I|L};[YR]PE{I|L}[K{I|L}]T{I|L};[K{I|L}][EP]VP[HS]{I|L}{I|L};[K{I|L}][EP]{I|L}T[YR]{I|L} 3.0385;2.7355;2.6775;1.9697;1.758;1.455 -;-;-;-;-;- 215 1 1.465 48506.6 1.0 10534 5642 16172 HBL1_DMSO_200M_050219_1,16178 HBL1_DMSO_200M_050219_1,16178,IVCRMIRLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16179 78.621 114.0 693700.0 25 0 55752.0 + + 35894 SVIPDDSSKPLYL 13 75 717.379469034692 1432.7443851361838 2 717.3806030154228 MULTI CID FTMS 0 0 0 16172 694078.3125 0.6252545158619037 1 -0.0839462280273437 7 Unmodified _SVLWPYLWEQL_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 15.248480904072842 0.7179608125786238 3 [VS]{I|L}PDDSSK[{I|L}P]Y{I|L} 13 -1 + 75.898 0.0 0.0 5.2974 5.2974 87.815 0.0 0.0 0.0 18.89771052853473 11.590579197569014 11.590579197569014 16.36179174476564 0 0.9247425010840048 1.6989700043360187 0.4247425010840047 0.0 [VS]{I|L}PDDSSK[{I|L}P]Y{I|L};[VS]{I|L}PD{[C(Carbamidomethyl (C))E]|[WC]}K[{I|L}P]Y{I|L};[{I|L}P]YK[WP]HDP{I|L}[PA];[{I|L}P]YK{[C(Carbamidomethyl (C))E]|[WC]}[{M(Oxidation (M))|F}V]P{I|L}[PA];[{I|L}P]YK[WP][WY]{I|L}[PA] 5.2974;4.1554;2.94;1.8414;1.2935 -;-;-;-;- 241 + 1 1.465 63891.3 1.0 10535 5642 16172 HBL1_DMSO_200M_050219_1,16179 HBL1_DMSO_200M_050219_1,16179,SVLWPYLWEQL False False SVIPDDSSKPLYL 78.62143 717.380603015423 18604444.0 16172.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 7.9367756843566895 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16180 78.623 55.0 1314900.0 25 0 106010.0 + 17232 KLLKDLPEL 9 117 534.8371581273175 1067.6597633214349 2 534.8372680544853 MULTI CID FTMS 0 0 0 16172 669022.0 0.4285869978572155 4 -0.3671722412109375 8 Unmodified _KLLKDLPEL_ ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4 39.21299971606389 0.0797768173001226 3 [EP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}K{I|L}{I|L} 9 4 + 37.742 0.0 0.0 3.5351 3.5351 70.745 0.0 0.0 0.0 1.3486159490703713 16.751736484954385 1.3486159490703713 1.7090855420368385 0 0.3054621874040891 1.154901959985743 0.0 0.3807196863200844 [EP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}K{I|L}{I|L};[K{I|L}]{I|L}D{I|L}K[EP]{I|L};[EP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}K{I|L};{[TV]|[{I|L}S]}[PS][TP]{I|L}K{I|L}{I|L};{[TV]|[{I|L}S]}[PS][TP]{I|L}{I|L}K{I|L};[K{I|L}]{I|L}D{I|L}[EP]K{I|L};{[QN]|[E{I|L}]|[KN]}P{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}K{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}V]KK[EP]{I|L};[K{I|L}]{I|L}D[EP]K{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}P{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}K{I|L} 3.5351;3.375;3.3701;2.6344;2.4695;2.4598;2.2884;2.1923;2.1778;2.1235 -;-;-;-;-;-;-;-;-;- 427 1 1.465 59712.9 1.0 10536 5642 16172 HBL1_DMSO_200M_050219_1,16180 HBL1_DMSO_200M_050219_1,16180,KLLKDLPEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16181 78.625 128.0 682090.0 25 0 108910.0 33515 SILARLVL 8 108 442.7998189850632 883.5850850369264 2 442.7999450564384 MULTI CID FTMS 0 0 0 16172 620621.0 0.0292207734118227 11 -0.9657669067382812 9 Unmodified _SILARLVL_ AluSg_dup36345|chr22:39033812-39034106:-|1.7183411907320236|0.3290854125150665|2.38|48.0|14|1|anti-sense 42.09456458481378 0.1992492688217789 3 [{I|L}A]RV{I|L}TV{I|L} 8 4 + 51.891 0.0 0.0 5.8728 5.8728 78.401 0.0 0.0 0.0 5.9958537220010655 16.40978057358332 5.9958537220010655 1.7731749024395782 0 0.5 0.6575773191777937 0.7742275032520141 0.0 [{I|L}A]RV{I|L}TV{I|L};[{I|L}A]RVT{I|L}V{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}V{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GKK 5.8728;5.6721;5.1942;4.9935;1.4307 -;-;-;-;- 248 1 1.465 73619.4 1.0 10537 5642 16172 HBL1_DMSO_200M_050219_1,16181 HBL1_DMSO_200M_050219_1,16181,SILARLVL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 16182 78.627 27.0 1213400.0 25 0 130950.0 -1 LLQDMVVML 9 69 539.2901481789592 1076.5657434247182 2 539.2894164919853 MULTI CID FTMS 0 0 0 16172 600420.875 0.5811305725307876 1 -0.0839462280273437 10 Oxidation (M) _LLQDMVVM(Oxidation (M))L_ ENSG00000198838|ENST00000634891|RYR3;nc|ENSG00000198838|Q15413-2|RYR3 10.823927491677226 0.5436922275383211 3 {M(Oxidation (M))|F}{I|L}VV 4 -1 13.293 0.0 0.0 1.2348 0.0 0.0 600.2676869123062 0.0 600.2676869123062 0.0 2.0342701574030464 0.0 0.0 0 0.4876954943324546 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}VV 1.2348 - 91 1 1.465 32044.8 1.0 10538 5642 16172 HBL1_DMSO_200M_050219_1,16182 HBL1_DMSO_200M_050219_1,16182,LLQDMVVML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16183 78.628 70.0 768550.0 25 0 122150.0 + 32250 RWPDYVREL 9 80 617.3225132351072 1232.6304735370145 2 617.3248168826103 MULTI CID FTMS 0 0 0 16172 440645.5 0.0838221024392072 26 -2.1128158569335938 11 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 12.872603262515298 0.4882369880199512 3 [VG]W[DP]R 6 6 25.99 0.0 0.0 2.1085 0.0 0.0 0.0 519.2576387994749 519.2576387994749 2.433787369250176 0.0 0.0 0.0 0 0.8252574989159953 1.0457574905606752 0.0 0.0 [VG]W[DP]R 2.1085 - 65 + 1 1.465 44486.1 1.0 10539 5642 16172 HBL1_DMSO_200M_050219_1,16183 HBL1_DMSO_200M_050219_1,16183,RWPDYVREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16184 78.635 399.0 363710.0 25 0 60911.0 -1 0 142 666.3276415278764 665.3203650612763 1 666.3276855349541 MULTI CID FTMS 0 0 0 16172 367948.5 0.2424958090710904 6 -0.5300521850585938 12 3 [AG]{M(Oxidation (M))|F}G{I|L}AM 7 -1 + 62.334 0.0 0.0 9.369 9.369 91.183 0.0 0.0 0.0 6.676900905975884 15.769469451263944 6.676900905975884 5.897554856604167 0 0.8388903526330403 2.0 0.0 0.0 [AG]{M(Oxidation (M))|F}G{I|L}AM;[AG]{M(Oxidation (M))|F}GA{I|L}M;{[CT]|[{M(Oxidation (M))|F}G]}Q{I|L}AM;{[CT]|[{M(Oxidation (M))|F}G]}AG{I|L}AM;[AG]{M(Oxidation (M))|F}Q{I|L}M;[AG]G{M(Oxidation (M))|F}{I|L}AM;{[CT]|[{M(Oxidation (M))|F}G]}QA{I|L}M;{[CT]|[{M(Oxidation (M))|F}G]}AGA{I|L}M;[AG]{M(Oxidation (M))|F}{I|L}GAM;[AG]{I|L}{M(Oxidation (M))|F}GAM 9.369;8.4826;8.3654;8.3376;7.6239;7.5196;7.479;7.4512;7.432;7.432 -;-;-;-;-;-;-;-;-;- 438 1 1.465 108839.1 1.0 10540 5642 16172 HBL1_DMSO_200M_050219_1,16184 HBL1_DMSO_200M_050219_1,16184, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16185 78.643 408.0 165620.0 25 0 28224.0 -1 YDEFEYCWDTF 11 90 787.7919810998238 1573.5694092664476 2 788.2957641482353 MULTI CID FTMS 0 0 0 16172 338026.09375 1.0 0 0.0 13 Carbamidomethyl (C) _YDEFEYC(Carbamidomethyl (C))WDTF_ ENSG00000179750|ENST00000333467|APOBEC3B;nc|ENSG00000179750|Q9UH17-3|APOBEC3B 1.3295316138638542 0.8688751186870782 3 TGD[WC(Carbamidomethyl (C))]Y 6 -1 19.927 0.0 0.0 1.2663 0.0 0.0 773.3019054596101 0.0 773.3019054596101 0.0 12.936909460092 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TGD[WC(Carbamidomethyl (C))]Y 1.2663 - 199 + 1 1.465 53647.1 1.0 10541 5642 16172 HBL1_DMSO_200M_050219_1,16185 HBL1_DMSO_200M_050219_1,16185,YDEFEYCWDTF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16186 78.644 73.0 508500.0 25 0 66193.0 + 34500 SMTLAIHEI 9 80 507.7682244620824 1013.5218959909648 2 507.7683593630791 MULTI CID FTMS 0 0 0 16172 290136.71875 0.4196070134994652 4 -0.3671722412109375 14 Unmodified _SMTLAIHEI_ ENSG00000143753|ENST00000323699|DEGS1 37.97399986684836 0.0865783450051559 3 {[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A{I|L} 6 3 50.45 0.0 0.0 4.9777 0.0 0.0 0.0 394.17353235416255 394.17353235416255 36.47099695308839 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + {[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A{I|L} 4.9777 + + 73 + 1 1.465 36264.3 1.0 10542 5642 16172 HBL1_DMSO_200M_050219_1,16186 HBL1_DMSO_200M_050219_1,16186,SMTLAIHEI True True SMTLAIHEI 78.644487 507.768359363079 11818841.0 16172.0 ENSG00000143753|ENST00000323699|DEGS1 5.448403199513753 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16187 78.647 146.0 386760.0 25 0 34246.0 + 2360 AQLPRIFHV 9 96 360.88179139237246 1079.6235447773174 3 360.8818847537041 MULTI CID FTMS 0 0 0 16172 268223.6875 0.9145925060843844 1 -0.0839462280273437 15 Unmodified _AQLPRIFHV_ ENSG00000100889|ENST00000216780|PCK2;nc|ENSG00000100889|Q16822-3|PCK2 15.248480904072842 0.4239247793462406 3 AQ{I|L} 3 6 32.435 0.0 0.0 3.0043 0.0 0.0 0.0 764.422572503667 764.422572503667 20.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.5 + AQ{I|L} 3.0043 + + 90 + 1 1.465 53238.2 1.0 10543 5642 16172 HBL1_DMSO_200M_050219_1,16187 HBL1_DMSO_200M_050219_1,16187,AQLPRIFHV False True AQLPRIFHV 78.647399 360.881884753704 4618908.0 16172.0 nc|ENSG00000100889|Q16822-3|PCK2;;ENSG00000100889|ENST00000216780|PCK2 5.528263250986735 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16188 78.65 144.0 520590.0 25 0 39094.0 + 22697 LQEHPCLVEL 10 107 590.8077839928966 0 590.8068725466728 PEAK CID FTMS 0 0 0 16172 222099.84375 0.4336441916153196 3 -0.2389144897460937 16 Unmodified _LQEHPCLVEL_ ENSG00000106009|ENST00000340611|BRAT1;ENST00000469750.5_1_7:2583168-2595320:-|nuORF;nc|ENSG00000106009|Q6PJG6-2|BRAT1 20.41453444215458 0.2949319999315323 3 V{I|L}E 3 8 16.198 0.0 0.0 1.3732 0.0 0.0 260.1356523165601 575.2513521783811 835.3870044949413 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 V{I|L}E 1.3732 - 42 + 1 1.465 60925.0 1.0 10544 5642 16172 HBL1_DMSO_200M_050219_1,16188 HBL1_DMSO_200M_050219_1,16188,LQEHPCLVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16189 78.661 600.0 75910.0 25 0 15635.0 -1 0 46 1140.119724872514 3417.3373452177425 3 1140.792407214642 MULTI CID FTMS 0 0 0 16172 134301.265625 0.7362425226073457 6 -0.5300521850585938 17 3 E 1 -1 5.4846 0.0 0.0 0.16049 0.0 0.0 2761.106584574968 524.1651705377561 3285.271755112724 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16049 - 11 + 1 1.465 44313.7 1.0 10545 5642 16172 HBL1_DMSO_200M_050219_1,16189 HBL1_DMSO_200M_050219_1,16189, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16190 78.668 380.0 235140.0 25 0 31546.0 + 42123 VRRAAAPA 8 137 406.2472786336377 810.4800043340755 2 406.2481567263603 MULTI CID FTMS 0 0 0 16172 143044.125 0.8813615454035558 -1 0.0876235961914062 18 Unmodified _VRRAAAPA_ REV__ENSG00000228594|ENST00000422725|FNDC10 0.7936320650641473 0.8195151834710337 3 {I|L} 1 -1 10.0 0.0 0.0 1.2338 0.0 0.0 679.3849401024333 0.0 679.3849401024333 0.0 1.751240091670816 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2338 - 37 + 1 1.465 74863.7 1.0 10546 5642 16172 HBL1_DMSO_200M_050219_1,16190 HBL1_DMSO_200M_050219_1,16190,VRRAAAPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16191 78.681 800.0 351300.0 25 0 40130.0 -1 GVIQMEMANR 10 263 394.1876254348798 1179.5410469048395 3 394.1878539919853 MULTI CID FTMS 0 0 0 16172 134257.234375 0.6187675508761621 -3 0.2544021606445312 19 2 Oxidation (M) _GVIQM(Oxidation (M))EM(Oxidation (M))ANR_ ENSG00000154760|ENST00000285013|SLFN13 16.565877749689598 0.5695826726197942 3 [Q{I|L}][HC]DWQ 7 -1 39.059 0.0 0.0 3.3114 0.0 0.0 0.0 266.1488709617333 266.1488709617333 26.84742656579786 0.0 0.0 0.0 0 0.0 0.5528419686577808 0.6747425010840047 1.079689690656103 [Q{I|L}][HC]DWQ 3.3114 - 223 1 1.465 221240.1 0.7599999904632568 10547 5642 16172 HBL1_DMSO_200M_050219_1,16191 HBL1_DMSO_200M_050219_1,16191,GVIQMEMANR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16192 78.693 579.0 84809.0 25 0 19914.0 -1 0 51 1116.787158191204 0 1116.787158191204 PEAK CID FTMS 0 0 0 -1 0 20 3 {I|L}{[CP]|[EA]}S 4 -1 12.747 0.0 0.0 0.57123 0.0 0.0 1405.1489059203195 423.19053064517817 1828.3394365654976 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {I|L}{[CP]|[EA]}S 0.57123 - 19 + 1 1.465 42482.5 1.0 10548 5642 16172 HBL1_DMSO_200M_050219_1,16192 HBL1_DMSO_200M_050219_1,16192, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16194 78.697 20.0 2605900.0 25 0 241160.0 + 25335 NALDKVLSV 9 76 479.78167184933096 957.548790765462 2 479.7817565798759 MULTI CID FTMS 0 0 0 16193 2621828.0 0.5827879988476845 2 -0.15496826171875 1 Unmodified _NALDKVLSV_ ENSG00000159063|ENST00000299626|ALG8;ENST00000524925.1_1_11:77817969-77825348:-|nuORF;nc|ENSG00000159063|Q9BVK2-2|ALG8 49.55428908609986 0.0413471690215031 3 {[QG]|[NA]}{I|L}D 4 5 45.507 0.0 0.0 4.7524 0.0 0.0 0.0 541.3348482721311 541.3348482721311 7.573942819638994 0.0 0.0 0.0 0 1.16944517631652 2.0 0.0 0.0 + {[QG]|[NA]}{I|L}D 4.7524 + + 280 + 1 1.465 45368.2 1.0 10549 5643 16193 HBL1_DMSO_200M_050219_1,16194 HBL1_DMSO_200M_050219_1,16194,NALDKVLSV True True NALDKVLSV 78.697092 479.781756579876 81286842.0 16193.0 ENSG00000159063|ENST00000299626|ALG8;;ENST00000524925.1_1_11:77817969-77825348:-|nuORF;;nc|ENSG00000159063|Q9BVK2-2|ALG8 5.821539084116618 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16195 78.698 22.0 1499500.0 25 0 91915.0 + 30609 RFFDTNTSVL 10 63 600.3061654567218 1198.5977779802436 2 600.3066284060478 MULTI CID FTMS 0 0 0 16193 2248855.0 0.695071067408546 2 -0.15496826171875 2 Unmodified _RFFDTNTSVL_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 32.037481411007896 0.2488723560272515 3 DTNTSV{I|L} 7 3 54.685 0.0 0.0 4.5624 0.0 0.0 450.2386385734818 0.0 450.2386385734818 0.0 39.46858230198188 0.0 0.0 0 0.5 0.0 1.0 0.0 + DTNTSV{I|L} 4.5624 + + 219 1 1.465 31529.3 1.0 10550 5643 16193 HBL1_DMSO_200M_050219_1,16195 HBL1_DMSO_200M_050219_1,16195,RFFDTNTSVL False True RFFDTNTSVL 78.698269 600.306628406048 68136612.0 16193.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 8.994296232859293 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16196 78.699 6.6 6887400.0 25 0 865080.0 + 18266 KVIEINPYL 9 66 544.8207883877005 1087.627023842201 2 544.8214599490166 MULTI CID FTMS 0 0 0 16193 7579759.5 1.0 0 0.0 3 Unmodified _KVIEINPYL_ ENSG00000100804|ENST00000361611|PSMB5;ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000100804|P28074-2|PSMB5;nc|ENSG00000204264|P28062-2|PSMB8 38.17557092003332 0.0854718145212029 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}NPY{I|L} 9 0 + 47.374 0.0 0.0 4.3557 4.3557 82.303 0.0 0.0 0.0 2.05136871872881 22.312215777050497 2.05136871872881 9.208187539523747 0 1.5044321917401078 0.0 0.0 0.4247425010840047 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}NPY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}GGPY{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}V]KNPY{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}V]KGGPY{I|L} 4.3557;3.5091;3.0704;2.2238 +;-;-;- + 151 1 1.465 47159.6 1.0 10551 5643 16193 HBL1_DMSO_200M_050219_1,16196 HBL1_DMSO_200M_050219_1,16196,KVIEINPYL True True KVIEINPYL 78.699449 544.821459949017 129996864.0 16193.0 nc|ENSG00000100804|P28074-2|PSMB5;;ENSG00000100804|ENST00000361611|PSMB5;;ENSG00000204264|ENST00000374882|PSMB8;;nc|ENSG00000204264|P28062-2|PSMB8 6.227841059366862 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16197 78.702 125.0 742410.0 25 0 96432.0 + 35949 SVPLKVPGL 9 96 455.2921888396193 908.5698247460386 2 455.2921935915947 MULTI CID FTMS 0 0 0 16193 515136.6875 0.9295838712173212 -4 0.338348388671875 4 Unmodified _SVPLKVPGL_ ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1 36.04419817259434 0.0971720506436186 3 [VS]P{I|L}KVPG{I|L} 9 0 + 58.324 0.0 0.0 6.4194 6.4194 88.011 0.0 0.0 0.0 10.419562702124452 8.893017025063095 8.893017025063095 8.893017025063095 0 0.3252574989159953 2.0 0.0 0.0 + + [VS]P{I|L}KVPG{I|L};[VS]P{I|L}KVPAV;[VS]VVK{I|L}P[PA];{[TV]|[{I|L}S]}[{I|L}A]K{I|L}P[PA];[K{I|L}]V[TA]{I|L}P[PA] 6.4194;5.4406;5.2726;1.8784;1.7164 +;-;-;-;- + 173 + 1 1.465 76093.2 1.0 10552 5643 16193 HBL1_DMSO_200M_050219_1,16197 HBL1_DMSO_200M_050219_1,16197,SVPLKVPGL True True SVPLKVPGL 78.70202 455.292193591595 9552127.0 16193.0 nc|ENSG00000065000|O14617-2|AP3D1;;ENSG00000065000|ENST00000643116|AP3D1;;nc|ENSG00000065000|O14617-4|AP3D1;;nc|ENSG00000065000|O14617-3|AP3D1;;nc|ENSG00000065000|O14617|AP3D1 5.876192569732666 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16198 78.704 63.0 760950.0 25 0 68738.0 + 32328 RYLPQCSYF 9 82 588.7790539258 1175.5435549184 2 589.7817260622978 MULTI CID FTMS 0 0 0 16193 466217.71875 1.0 0 0.0 5 Unmodified _RYLPQCSYF_ ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2 21.74664581756881 0.2544899275067181 3 Y{M(Oxidation (M))|F} 2 7 18.201 0.0 0.0 1.5483 0.0 0.0 847.4013868049218 0.0 847.4013868049218 0.0 8.020014342688668 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + Y{M(Oxidation (M))|F} 1.5483 + + 41 + 1 1.465 42151.3 1.0 10553 5643 16193 HBL1_DMSO_200M_050219_1,16198 HBL1_DMSO_200M_050219_1,16198,RYLPQCSYF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16199 78.705 63.0 625140.0 25 0 54688.0 + -1 PLMLLQVPM 9 82 537.290713953186 1072.566874973172 2 537.2869140505791 MULTI CID FTMS 0 0 0 16193 387924.34375 0.206141980612365 18 -1.5710906982421875 6 2 Oxidation (M) _PLM(Oxidation (M))LLQVPM(Oxidation (M))_ REV__ENST00000344692.7_1_8:144356972-144357419:+|nuORF 19.438996006549623 0.310492472477042 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L} 5 -1 21.929 0.0 0.0 2.0445 0.0 0.0 0.0 486.2058846982721 486.2058846982721 5.449171771974765 0.0 0.0 0.0 0 0.3054621874040891 1.0457574905606752 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L} 2.0445 - 116 1 1.465 38945.2 1.0 10554 5643 16193 HBL1_DMSO_200M_050219_1,16199 HBL1_DMSO_200M_050219_1,16199,PLMLLQVPM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16200 78.707 89.0 644450.0 25 0 79444.0 + 3285 AYHGLTVPL 9 90 485.77206504871015 969.5295771642204 2 485.7728454470634 MULTI CID FTMS 0 0 0 16193 339147.5625 0.1029206231696578 7 -0.6260757446289062 7 Unmodified _AYHGLTVPL_ ENSG00000113732|ENST00000519374|ATP6V0E1 26.34127834903884 0.1960301806784604 3 TEPSP{I|L} 6 7 45.252 0.0 0.0 4.6675 0.0 0.0 327.21672423628905 0.0 327.21672423628905 0.0 32.06485629844558 0.0 0.0 0 0.0 0.0 0.8252574989159953 0.0 TEPSP{I|L} 4.6675 - 263 + 1 1.465 50158.8 1.0 10555 5643 16193 HBL1_DMSO_200M_050219_1,16200 HBL1_DMSO_200M_050219_1,16200,AYHGLTVPL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16201 78.716 505.0 287430.0 25 0 23703.0 + -1 FNMGVTPQT 9 121 1010.463994043944 1009.456717577344 1 1011.468432605267 MULTI CID FTMS 0 0 0 16193 324227.375 0.5513285735237541 2 -0.15496826171875 8 Oxidation (M) _FNM(Oxidation (M))GVTPQT_ REV__ENSG00000182774|ENST00000647841|RPS17;REV__ENST00000423610.1_1_22:32435574-32435880:+|nuORF;REV__ENST00000558397.1_1_15:83205554-83206687:-|nuORF;REV__ENST00000561068.5_3_15:83205554-83208094:-|nuORF;REV__ENST00000561157.5_1_15:83205554-83205662:-|nuORF 17.11289562659939 0.3734572693229295 3 [NP]GVYVTM 8 -1 33.229 0.0 0.0 3.2917 0.0 0.0 0.0 145.07595520845658 145.07595520845658 14.66971831757662 0.0 0.0 0.0 0 0.0 0.958607314841775 0.3494850021680094 0.841129063296272 [NP]GVYVTM 3.2917 - 2673 1 1.465 97073.2 1.0 10556 5643 16193 HBL1_DMSO_200M_050219_1,16201 HBL1_DMSO_200M_050219_1,16201,FNMGVTPQT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16202 78.721 294.0 248000.0 25 0 57868.0 43292 WKHAIHRRHI 10 92 451.9322425727727 1352.774898318518 3 451.9326965212822 MULTI CID FTMS 0 0 0 16193 318363.875 0.7744443293194055 2 -0.15496826171875 9 Unmodified _WKHAIHRRHI_ ENSG00000160993|ENST00000292566|ALKBH4 3.5964929083625545 0.7100006075494749 3 {I|L} 1 9 13.099 0.0 0.0 0.9683 0.0 0.0 1221.679879863243 0.0 1221.679879863243 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.9683 + + 39 + 1 1.465 76461.1 1.0 10557 5643 16193 HBL1_DMSO_200M_050219_1,16202 HBL1_DMSO_200M_050219_1,16202,WKHAIHRRHI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16203 78.73 457.0 663740.0 25 0 36982.0 + + -1 FQWDPQQPRL 10 168 657.7719951080023 1313.5294372828046 2 657.7727538943291 MULTI CID FTMS 0 0 0 16193 292819.125 0.1438651455526133 -2 0.17156982421875 10 Oxidation (M) _VDEPETM(Oxidation (M))EVSY_ ENSG00000116213|ENST00000270708|WRAP73 34.40172386719151 0.2986346176549658 3 [PS]GVD{[QC]|[C(Carbamidomethyl (C))A]}MEVSY 12 -1 + 57.609 0.0 0.0 4.3858 4.3858 71.559 0.0 0.0 0.0 3.673487989661048 12.57007180900061 3.673487989661048 0.7268250975604218 0 0.9247425010840048 0.8860566476931632 1.1906140654642814 0.3807196863200844 [PS]GVD{[QC]|[C(Carbamidomethyl (C))A]}MEVSY;[PS]GDV{[QC]|[C(Carbamidomethyl (C))A]}MEVSY;[PS]GC(Carbamidomethyl (C)){I|L}[DG]MEVSY;[VG]SPD{[QC]|[C(Carbamidomethyl (C))A]}MEVSY;{[QD]|[EN]|[WG]|[KD]|[RS]}PDS[SG]MEVSY;{[QD]|[EN]|[WG]|[KD]|[RS]}PSD[SG]MEVSY;[DP]KD{[QC]|[C(Carbamidomethyl (C))A]}MEVSY;[PS]GVDS[SG]MEWY;[PS]GVSD[SG]MEWY;[PS]GDVS[SG]MEWY 4.3858;4.3305;4.1911;4.1062;4.0301;4.0207;4.0077;3.9814;3.972;3.9261 -;-;-;-;-;-;-;-;-;- 4048 1 1.465 217452.9 1.0 10558 5643 16193 HBL1_DMSO_200M_050219_1,16203 HBL1_DMSO_200M_050219_1,16203,VDEPETMEVSY False False FQWDPQQPRL 78.729524 657.772753894329 4414077.0 16193.0 ENSG00000116213|ENST00000270708|WRAP73 3.561472654342652 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16204 78.743 800.0 288520.0 25 0 29201.0 + 2892 AVFKELVKL 9 241 349.5584585104268 1045.6535461314804 3 349.5583068728447 MULTI CID FTMS 0 0 0 16193 187019.375 0.9917497258014896 1 -0.11932373046875 11 Unmodified _AVFKELVKL_ ENSG00000100883|ENST00000216774|SRP54;nc|ENSG00000100883|P61011-2|SRP54 45.739877483867886 0.0497104363764649 3 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}KE{I|L}VK{I|L} 9 0 + 67.972 0.0 0.0 6.5005 6.5005 77.923 0.0 0.0 0.0 24.137342758552684 10.117215525495295 10.117215525495295 0.4406804435027567 0 0.3807196863200844 1.6989700043360187 0.3807196863200844 0.6747425010840047 + + {[VA]|[{I|L}G]}{M(Oxidation (M))|F}KE{I|L}VK{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}K{I|L}EVK{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}KEVK{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}KE{I|L}V{I|L}K;{[VA]|[{I|L}G]}{M(Oxidation (M))|F}K{I|L}EV{I|L}K;{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}KEVK{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}SG{I|L}VK{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}KEV{I|L}K;{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}SG{I|L}VK{I|L};{[VA]|[{I|L}G]}{I|L}[YQ]{I|L}VK{I|L} 6.5005;6.4583;5.6843;5.5329;5.4908;5.228;5.1081;4.7167;4.6518;4.3432 +;-;-;-;-;-;-;-;-;- + 413 + 1 1.465 192526.8 0.8999999761581421 10559 5643 16193 HBL1_DMSO_200M_050219_1,16204 HBL1_DMSO_200M_050219_1,16204,AVFKELVKL True True AVFKELVKL 78.743338 349.558306872845 1568368.625 16193.0 nc|ENSG00000100883|P61011-2|SRP54;;ENSG00000100883|ENST00000216774|SRP54 4.533925374348958 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16205 78.757 800.0 339100.0 25 0 49616.0 + 16774 KGCCLVSS 8 224 398.6881486314853 795.3617443297707 2 398.6885558962822 MULTI CID FTMS 0 0 0 16193 183866.953125 0.9095588554701214 -1 0.0839462280273437 12 Unmodified _KGCCLVSS_ REV__ENST00000498753.1_1_3:141762467-141763034:-|nuORF 9.347437153973935 0.7675937258251505 3 {I|L}[YG]{[C(Carbamidomethyl (C))G]|[NC]}N{I|L} 7 -1 + 17.055 0.0 0.0 2.1443 2.1443 78.847 0.0 0.0 0.0 3.0757075397237017 5.003738907715265 3.0757075397237017 10.700378666077548 0 0.0610312860818771 0.0 0.0 0.25 {I|L}[YG]{[C(Carbamidomethyl (C))G]|[NC]}N{I|L};{I|L}[YG]{[C(Carbamidomethyl (C))G]|[NC]}QV;[YK]EED{I|L};{I|L}[YG][SG]{[WN]|[YH]} 2.1443;0.79897;0.77311;0.54379 -;-;-;- 120 + 1 1.465 210678.8 0.9300000071525574 10560 5643 16193 HBL1_DMSO_200M_050219_1,16205 HBL1_DMSO_200M_050219_1,16205,KGCCLVSS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16206 78.768 614.0 299770.0 25 0 24330.0 + 5457 DLRAVILPTL 10 195 555.8475662962148 1109.6805796592296 2 555.8475219607353 MULTI CID FTMS 0 0 0 16193 148720.484375 0.7743259200504388 2 -0.15496826171875 13 Unmodified _DLRAVILPTL_ REV__MER113_dup2016|chr11:61029837-61030133:-|1.529351053882125|0.1325163151881793|3.53|48.0|2|1|sense 19.256988751693697 0.5244284437930726 3 [{I|L}P]TN[K{I|L}]{I|L}QA{I|L} 10 -1 + 25.308 0.0 0.0 2.2807 2.2807 75.655 0.0 0.0 0.0 2.7159464574527874 2.861079341630031 2.7159464574527874 7.235970198427591 0 0.8609243748081783 1.3010299956639813 0.0 0.0 [{I|L}P]TN[K{I|L}]{I|L}QA{I|L};[{I|L}T]PN[K{I|L}]{I|L}QA{I|L};{[TV]|[{I|L}S]}[QP][K{I|L}]{I|L}QA{I|L};[{I|L}P]TGG[K{I|L}]{I|L}QA{I|L};[{I|L}P]TN[K{I|L}]{I|L}[AG]A{I|L};[AG]PS{I|L}[K{I|L}]{I|L}QA{I|L};[AG]SP{I|L}[K{I|L}]{I|L}QA{I|L};{[VA]|[{I|L}G]}A[PS][K{I|L}]{I|L}QA{I|L};[QP]S{I|L}[K{I|L}]{I|L}QA{I|L};[{I|L}P]TNQRR{I|L}{I|L} 2.2807;1.6286;1.5527;1.4548;1.4548;1.367;1.2083;1.1583;1.1543;1.0673 -;-;-;-;-;-;-;-;-;- 5526 1 1.465 140706.5 1.0 10561 5643 16193 HBL1_DMSO_200M_050219_1,16206 HBL1_DMSO_200M_050219_1,16206,DLRAVILPTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16207 78.783 800.0 215130.0 25 0 24961.0 -1 0 200 457.4410010307588 2738.6023473849527 6 457.6088134646416 MULTI CID FTMS 0 0 0 16193 107232.65625 0.7255442832262425 -4 0.338348388671875 14 3 [{I|L}V]N 3 -1 14.181 0.0 0.0 0.51783 0.0 0.0 0.0 2409.3840911195807 2409.3840911195807 0.6863623584101237 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [{I|L}V]N 0.51783 - 550 1 1.465 138773.2 0.699999988079071 10562 5643 16193 HBL1_DMSO_200M_050219_1,16207 HBL1_DMSO_200M_050219_1,16207, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16208 78.797 800.0 34631.0 25 0 5333.0 + 43427 WRRLLRKRWVL 11 53 791.5023681521416 0 791.5023681521416 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _WRRLLRKRWVL_ ENSG00000111412|ENST00000261318|SPRING1 0.0 0.4761840153648598 3 {I|L} 1 10 3.9794 0.0 0.0 0.2517 0.0 0.0 1271.784843870886 193.09809290103752 1464.8829367719236 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.2517 + + 16 + 1 1.465 31793.7 0.949999988079071 10563 5643 16193 HBL1_DMSO_200M_050219_1,16208 HBL1_DMSO_200M_050219_1,16208,WRRLLRKRWVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16209 78.812 800.0 235690.0 25 0 27276.0 + + 19423 DPYNPQNFTATI 12 213 690.8264652853192 0 690.8254272341728 PEAK CID FTMS 0 0 0 16193 67639.625 0.8968915793501802 2 -0.15496826171875 16 Unmodified _LEVEEYELEDL_ ENSG00000158615|ENST00000367188|PPP1R15B 9.38312468134398 0.4559597037863106 3 {M(Oxidation (M))|F}N[QP]DC(Carbamidomethyl (C))D 7 -1 11.322 0.0 0.0 0.82065 0.0 0.0 404.2294613382159 96.0825670831664 500.3120284213823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4361818737241735 0.3807196863200844 {M(Oxidation (M))|F}N[QP]DC(Carbamidomethyl (C))D 0.82065 - 232 + 1 1.465 135552.3 0.949999988079071 10564 5643 16193 HBL1_DMSO_200M_050219_1,16209 HBL1_DMSO_200M_050219_1,16209,LEVEEYELEDL False False DPYNPQNFTATI 78.812011 690.825427234173 1290410.75 16193.0 ENSG00000158615|ENST00000367188|PPP1R15B 6.671860376993815 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16211 78.816 7.0 7974000.0 25 0 672600.0 + 13620 HPPSHWPLI 9 79 542.2903820269429 1082.5662111206857 2 542.2910644412041 MULTI CID FTMS 0 0 0 16210 6076114.5 0.5015820256069474 -3 0.2908935546875 1 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 67.34385681178166 0.0221257235307089 3 P[PS]HGEP{I|L}{I|L} 9 3 59.294 0.0 0.0 5.4771 0.0 0.0 137.05926711250157 0.0 137.05926711250157 0.0 23.307518094594144 0.0 0.0 0 1.7614393726401687 0.0 1.024227503252014 0.0 P[PS]HGEP{I|L}{I|L} 5.4771 - 405 1 1.492 45702.1 1.0 10565 5644 16210 HBL1_DMSO_200M_050219_1,16211 HBL1_DMSO_200M_050219_1,16211,HPPSHWPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16212 78.818 14.0 3217800.0 25 0 385560.0 + 42849 VVLGEFGVRNV 11 53 594.8403079034211 1187.6660628736422 2 594.8409911990166 MULTI CID FTMS 0 0 0 16210 2999288.0 0.5886051182337027 1 -0.03564453125 2 Unmodified _VVLGEFGVRNV_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 22.65808497894818 0.560183898709508 3 VV{I|L}GE{M(Oxidation (M))|F}R 7 4 62.791 0.0 0.0 5.2869 0.0 0.0 0.0 384.2003267877563 384.2003267877563 55.80152905678226 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 VV{I|L}GE{M(Oxidation (M))|F}R 5.2869 - 39 + 1 1.492 42391.4 1.0 10566 5644 16210 HBL1_DMSO_200M_050219_1,16212 HBL1_DMSO_200M_050219_1,16212,VVLGEFGVRNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16213 78.819 13.0 4493000.0 25 0 637170.0 + 19540 LFPRMLVR 8 92 516.3136621918686 1030.6127714505371 2 516.3143798708916 MULTI CID FTMS 0 0 0 16210 2973915.75 0.421429152939541 -4 0.3609390258789062 3 Unmodified _LFPRMLVR_ REV__ENST00000357376.7_1_2:55255317-55276328:-|nuORF 2.889219685676258 0.8067950007271085 3 [NP]{I|L}DK 5 -1 13.768 0.0 0.0 1.3359 0.0 0.0 0.0 460.2865745113372 460.2865745113372 0.5799194697768684 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}DK 1.3359 - 37 1 1.492 51426.2 1.0 10567 5644 16210 HBL1_DMSO_200M_050219_1,16213 HBL1_DMSO_200M_050219_1,16213,LFPRMLVR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16214 78.82 16.0 4450400.0 25 0 660090.0 + 3112 AVPEIMDRI 9 59 522.280679673034 1042.546806412868 2 522.2815429568291 MULTI CID FTMS 0 0 0 16210 2497969.75 0.5186052401977908 -3 0.2908935546875 4 Unmodified _AVPEIMDRI_ ENSG00000068366|ENST00000672401|ACSL4;ENSG00000123983|ENST00000357430|ACSL3;nc|ENSG00000068366|O60488|ACSL4 31.26834338654808 0.1333407332142048 3 {[VA]|[{I|L}G]}PE{I|L}MDR{I|L} 9 0 + 71.916 0.0 0.0 6.8981 6.8981 83.492 0.0 0.0 0.0 38.00312209084183 11.478174818886371 11.478174818886371 3.0102999566398125 0 0.3807196863200844 2.0 0.3494850021680094 0.0 + + {[VA]|[{I|L}G]}PE{I|L}MDR{I|L};{[VA]|[{I|L}G]}P{I|L}EMDR{I|L};{[VA]|[{I|L}G]}{I|L}PEMDR{I|L};{[VA]|[{I|L}G]}PE{I|L}{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{I|L};{[VA]|[{I|L}G]}P{I|L}E{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{I|L};{[VA]|[{I|L}G]}{I|L}PE{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{I|L} 6.8981;6.6094;6.3506;5.2194;4.9307;4.6719 +;-;-;-;-;- + 146 + 1 1.492 67344.9 1.0 10568 5644 16210 HBL1_DMSO_200M_050219_1,16214 HBL1_DMSO_200M_050219_1,16214,AVPEIMDRI False True AVPEIMDRI 78.819952 522.281542956829 145784064.0 16210.0 ENSG00000068366|ENST00000672401|ACSL4;;ENSG00000123983|ENST00000357430|ACSL3;;nc|ENSG00000068366|O60488|ACSL4 4.127646128336589 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16215 78.821 23.0 3402900.0 25 0 307710.0 + 41863 VPYPLPKI 8 74 463.7892037353869 925.563854537574 2 463.7893249392509 MULTI CID FTMS 0 0 0 16210 1987789.25 0.3947648492153167 3 -0.2788009643554687 5 Unmodified _VPYPLPKI_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1 44.40701690623563 0.1655546087385432 3 VPYP{I|L}PK{I|L} 8 0 + 71.17 0.0 0.0 7.6893 7.6893 85.522 0.0 0.0 0.0 39.742916940020336 7.71271006008984 7.71271006008984 3.0102999566398125 0 1.1307196863200843 1.5228787452803376 0.0 0.0 + + VPYP{I|L}PK{I|L};VPY{I|L}PPK{I|L};V{I|L}{M(Oxidation (M))|F}P{I|L}PK{I|L};V{I|L}{M(Oxidation (M))|F}{I|L}PPK{I|L} 7.6893;7.3641;5.3074;4.9822 +;-;-;- + 207 + 1 1.492 63223.8 1.0 10569 5644 16210 HBL1_DMSO_200M_050219_1,16215 HBL1_DMSO_200M_050219_1,16215,VPYPLPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16216 78.822 29.0 456190.0 25 0 52836.0 -1 SVQRNKRDCL 10 35 638.3325191712581 1274.6504854093162 2 638.3328735232353 MULTI CID FTMS 0 0 0 16210 1601258.875 0.4395734342642333 3 -0.2788009643554687 6 Carbamidomethyl (C) _SVQRNKRDC(Carbamidomethyl (C))L_ ENSG00000164691|ENST00000367066|TAGAP;nc|ENSG00000164691|Q8N103-2|TAGAP;nc|ENSG00000164691|Q8N103-3|TAGAP 3.944395688203298 0.708391353636983 3 {I|L} 1 -1 11.99 0.0 0.0 0.94063 0.0 0.0 1143.5553296249395 0.0 1143.5553296249395 0.0 -4.208187539523749 -4.208187539523749 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.94063 + + 7 + 1 1.492 18463.0 1.0 10570 5644 16210 HBL1_DMSO_200M_050219_1,16216 HBL1_DMSO_200M_050219_1,16216,SVQRNKRDCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16217 78.823 36.0 482610.0 25 0 40334.0 + 29887 QRRRVHWLG 9 42 604.3483448405694 1206.6821367479388 2 604.3485595583916 MULTI CID FTMS 0 0 0 16210 1341576.25 0.587590135923138 3 -0.2788009643554687 7 Unmodified _QRRRVHWLG_ REV__ENSG00000139567|ENST00000388922|ACVRL1 0.6014990680409731 0.8936861360942873 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.492 18389.8 1.0 10571 5644 16210 HBL1_DMSO_200M_050219_1,16217 HBL1_DMSO_200M_050219_1,16217,QRRRVHWLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16218 78.825 30.0 1654800.0 25 0 147850.0 + + 45227 RYLPQCSYF 9 83 588.3355207439473 1174.6564885546943 2 588.3358032107353 MULTI CID FTMS 0 0 0 16210 1123763.75 0.4768448258779194 3 -0.2788009643554687 8 Unmodified _YRIIFGLFF_ nc|ENSG00000118971|P30279-2|CCND2;ENSG00000118971|ENST00000261254|CCND2 4.75600775471527 0.7486543447549536 3 YSC 3 -1 12.92 0.0 0.0 1.0999 0.0 0.0 164.18817908379452 654.3372142349215 818.5253933187159 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YSC 1.0999 - 38 + 1 1.492 44647.6 1.0 10572 5644 16210 HBL1_DMSO_200M_050219_1,16218 HBL1_DMSO_200M_050219_1,16218,YRIIFGLFF False False RYLPQCSYF 78.824667 588.335803210735 50849154.0 16210.0 nc|ENSG00000118971|P30279-2|CCND2;;ENSG00000118971|ENST00000261254|CCND2 5.792738596598308 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16219 78.826 43.0 1146100.0 25 0 143970.0 + 2304 AQIEDLQVKL 10 73 578.8318556235142 1155.6491583138284 2 578.8325683474541 MULTI CID FTMS 0 0 0 16210 1039470.6875 0.4576244384504738 1 -0.03564453125 9 Unmodified _AQIEDLQVKL_ ENSG00000157933|ENST00000378536|SKI 33.4449034751529 0.2267874087365337 3 [QA]{I|L}ED{I|L}QVK{I|L} 10 0 + 55.895 0.0 0.0 4.8367 4.8367 83.2 0.0 0.0 0.0 9.807131330965715 9.788107009300616 9.788107009300616 9.164539485499256 0 0.8494850021680094 1.0 0.4247425010840047 0.0 + + [QA]{I|L}ED{I|L}QVK{I|L};[QA]{I|L}ED{I|L}[AG]VK{I|L} 4.8367;4.0437 +;- + 351 + 1 1.492 41072.8 1.0 10573 5644 16210 HBL1_DMSO_200M_050219_1,16219 HBL1_DMSO_200M_050219_1,16219,AQIEDLQVKL False True AQIEDLQVKL 78.825886 578.832568347454 47746008.0 16210.0 ENSG00000157933|ENST00000378536|SKI 7.173713843027751 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16220 78.827 57.0 903660.0 25 0 162420.0 -1 TMLIKIVKS 9 69 524.8272781963168 1047.6400034594335 2 524.8277465701103 MULTI CID FTMS 0 0 0 16210 912634.875 0.1263073997862571 -3 0.2908935546875 10 Oxidation (M) _TM(Oxidation (M))LIKIVKS_ ENSG00000144406|ENST00000673920|UNC80;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80 1.844237919475145 0.850302753031785 3 V 1 -1 10.089 0.0 0.0 0.96299 0.0 0.0 930.560587115975 0.0 930.560587115975 0.0 0.1738105312960591 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.96299 + + 5 + 1 1.492 47097.8 1.0 10574 5644 16210 HBL1_DMSO_200M_050219_1,16220 HBL1_DMSO_200M_050219_1,16220,TMLIKIVKS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16221 78.829 63.0 961650.0 25 0 142930.0 + + 28612 DSRTFITI 8 85 476.7585082405048 951.5024635478096 2 476.7586242556572 MULTI CID FTMS 0 0 0 16210 873139.25 0.4579793885756955 1 -0.03564453125 11 Unmodified _PVELGSHTL_ nc|ENSG00000034152|P46734-3|MAP2K3;ENSG00000034152|ENST00000342679|MAP2K3;nc|ENSG00000034152|P46734-2|MAP2K3 36.04419817259434 0.0971720506436186 3 [{I|L}T][YN]D{I|L}T 7 -1 44.001 0.0 0.0 4.6244 0.0 0.0 0.0 128.0715302804846 128.0715302804846 26.12105376410099 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.6549471895720985 0.0 [{I|L}T][YN]D{I|L}T 4.6244 - 447 1 1.492 48710.8 1.0 10575 5644 16210 HBL1_DMSO_200M_050219_1,16221 HBL1_DMSO_200M_050219_1,16221,PVELGSHTL False False DSRTFITI 78.828867 476.758624255657 31808458.0 16210.0 nc|ENSG00000034152|P46734-3|MAP2K3;;ENSG00000034152|ENST00000342679|MAP2K3;;nc|ENSG00000034152|P46734-2|MAP2K3 1.5182136694590251 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16222 78.83 44.0 1554700.0 25 0 109790.0 + 44818 YPNLQLREI 9 94 573.3190960351423 1144.6236391370844 2 573.3196288943291 MULTI CID FTMS 0 0 0 16210 862564.875 0.6087910759705296 -2 0.2032699584960937 12 Unmodified _YPNLQLREI_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 39.21299971606389 0.0797768173001226 3 YPN{I|L}Q{I|L} 6 3 74.43 0.0 0.0 6.5026 0.0 0.0 0.0 413.21579919986567 413.21579919986567 44.59691590396389 0.0 0.0 0.0 0 0.6989700043360187 1.5228787452803376 0.0 0.805462187404089 + YPN{I|L}Q{I|L} 6.5026 + + 299 + 1 1.492 60166.6 1.0 10576 5644 16210 HBL1_DMSO_200M_050219_1,16222 HBL1_DMSO_200M_050219_1,16222,YPNLQLREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16223 78.832 62.0 1247900.0 25 0 122900.0 + 12226 GQVGHILEL 9 94 483.2755505213062 964.5365481094124 2 483.2746459841728 MULTI CID FTMS 0 0 0 16210 736693.3125 0.6687348852187212 1 -0.03564453125 13 Unmodified _GQVGHILEL_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 36.12702656103203 0.0967173616627612 3 {[HG]|PP}V{I|L}{I|L}NAE{I|L} 9 5 + 49.563 0.0 0.0 5.1385 5.1385 77.77 0.0 0.0 0.0 3.979400086720375 16.478174818886373 3.979400086720375 3.0102999566398125 0 0.6989700043360187 0.0 0.0 0.0 {[HG]|PP}V{I|L}{I|L}NAE{I|L};{[HG]|PP}{I|L}V{I|L}NAE{I|L};[H{I|L}]GV{I|L}NAE{I|L};{[HG]|PP}V{I|L}{[QG]|[NA]}{I|L}E{I|L};{[HG]|PP}V{[QG]|[NA]}{I|L}{I|L}E{I|L};{[HG]|PP}{I|L}{I|L}VNAE{I|L};[H{I|L}]G{I|L}VNAE{I|L};{[HG]|PP}V{I|L}{I|L}GGAE{I|L};{[HG]|PP}V{I|L}{I|L}E{[QG]|[NA]}{I|L};{[HG]|PP}{I|L}[NG]{I|L}{I|L}E{I|L} 5.1385;4.8264;4.7259;4.4429;4.4429;4.3317;4.2313;4.1838;4.1837;4.1308 -;-;-;-;-;-;-;-;-;- 502 1 1.492 64501.1 1.0 10577 5644 16210 HBL1_DMSO_200M_050219_1,16223 HBL1_DMSO_200M_050219_1,16223,GQVGHILEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16224 78.833 64.0 579770.0 25 0 49125.0 + + 9323 FLASVSTVLTSK 12 52 626.3609505499721 1250.7073481667442 2 626.8621703982353 MULTI CID FTMS 0 0 0 16210 559294.0625 0.1507609187591379 3 -0.2788009643554687 14 Unmodified _FIILWFATQI_ ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2 7.289230182591677 0.6929195370588109 3 V{I|L}VSA[Q{I|L}] 7 -1 32.963 0.0 0.0 2.6356 0.0 0.0 522.2884999005875 0.0 522.2884999005875 0.0 11.994332193581414 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 V{I|L}VSA[Q{I|L}] 2.6356 - 83 1 1.492 36779.7 1.0 10578 5644 16210 HBL1_DMSO_200M_050219_1,16224 HBL1_DMSO_200M_050219_1,16224,FIILWFATQI False False FLASVSTVLTSK 78.83319 626.862170398235 197689104.0 16210.0 ENSG00000206172|ENST00000320868|HBA1;;ENSG00000188536|ENST00000251595|HBA2 10.729278882344564 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16225 78.835 91.0 1266200.0 25 0 208930.0 + 19671 LGLGWVALI 9 129 471.2925295917672 940.5705062503343 2 471.2927429080009 MULTI CID FTMS 0 0 0 16210 517032.75 0.0398090878621772 5 -0.3834304809570312 15 Unmodified _LGLGWVALI_ REV__ENSG00000067177|ENST00000373542|PHKA1;REV__nc|ENSG00000067177|P46020-2|PHKA1;REV__nc|ENSG00000067177|P46020-3|PHKA1 28.17323086031832 0.1727213568982648 3 {[VA]|[{I|L}G]}DVQD{I|L}S 8 -1 43.381 0.0 0.0 4.6122 0.0 0.0 0.0 110.1353615572281 110.1353615572281 22.438893021738423 0.0 0.0 0.0 0 0.9838855026932704 2.0 0.0 0.0 {[VA]|[{I|L}G]}DVQD{I|L}S 4.6122 - 1303 1 1.492 92537.3 1.0 10579 5644 16210 HBL1_DMSO_200M_050219_1,16225 HBL1_DMSO_200M_050219_1,16225,LGLGWVALI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16226 78.838 161.0 404060.0 25 0 34155.0 + 19316 LELRALRWPA 10 87 612.861887491582 1223.709222049964 2 612.8615600466728 MULTI CID FTMS 0 0 0 16210 506754.65625 0.3823795798352934 3 -0.2788009643554687 16 Unmodified _LELRALRWPA_ REV__ENST00000263955.8_1_2:197028140-197036216:-|nuORF 3.2813086475875832 0.7114585191678878 3 V 1 -1 10.181 0.0 0.0 0.83198 0.0 0.0 1106.6300498471303 0.0 1106.6300498471303 0.0 0.717110711511566 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.83198 - 85 + 1 1.492 53410.7 1.0 10580 5644 16210 HBL1_DMSO_200M_050219_1,16226 HBL1_DMSO_200M_050219_1,16226,LELRALRWPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16227 78.84 62.0 875910.0 25 0 85184.0 19515 LFLTTYRVI 9 80 563.3352635352793 1124.6559741373585 2 563.3354369997978 MULTI CID FTMS 0 0 0 16210 474487.28125 0.0884381215705428 -3 0.2908935546875 17 Unmodified _LFLTTYRVI_ ENST00000444527.2_1_8:56364433-56364982:-|nuORF 25.399314129420983 0.2080152500878129 3 [{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDRV{I|L} 10 5 + 62.7 0.0 0.0 5.575 5.575 85.166 0.0 0.0 0.0 8.239087409443187 46.96948689370899 8.239087409443187 8.640751949142675 0 0.7302046884880937 1.0 1.555462187404089 0.0 [{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDRV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SV[PS]SV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVD[VG]V{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SV[PS]W{I|L};[{I|L}P][WK]V[PS]SV{I|L};[{I|L}P][WK]VD[VG]V{I|L} 5.575;4.8067;4.7601;3.5728;3.5551;3.5086 -;-;-;-;-;- 183 1 1.492 48398.1 1.0 10581 5644 16210 HBL1_DMSO_200M_050219_1,16227 HBL1_DMSO_200M_050219_1,16227,LFLTTYRVI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16228 78.842 115.0 379390.0 25 0 81680.0 40574 VKLRKMPRYY 10 83 677.3950840275277 1352.7756151218553 2 677.3956176638603 MULTI CID FTMS 0 0 0 16210 427436.6875 0.5112270961191743 3 -0.2788009643554687 18 Unmodified _VKLRKMPRYY_ ENSG00000089009|ENST00000202773|RPL6 0.4583401331227399 0.7245164002484112 3 Y 1 9 11.42 0.0 0.0 0.84419 0.0 0.0 1171.7007687857208 0.0 1171.7007687857208 0.0 7.925133260145909 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.84419 + + 5 + 1 1.492 44816.7 1.0 10582 5644 16210 HBL1_DMSO_200M_050219_1,16228 HBL1_DMSO_200M_050219_1,16228,VKLRKMPRYY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16229 78.844 70.0 576700.0 25 0 62797.0 + -1 LGASSDLCSL 10 76 511.7433452654727 1021.4721375977456 2 511.7431518435478 MULTI CID FTMS 0 0 0 16210 309506.9375 0.5435185385386286 -1 0.11932373046875 19 Carbamidomethyl (C) _LGASSDLC(Carbamidomethyl (C))SL_ REV__ENST00000452089.5_3_7:99950889-99956429:+|nuORF;REV__ENST00000609309.2_3_7:99955758-99956429:+|nuORF 16.942295170755138 0.5632667538960775 3 {[VA]|[{I|L}G]}A 3 -1 20.458 0.0 0.0 2.0028 0.0 0.0 0.0 777.3059748382329 777.3059748382329 6.03286222516239 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}A 2.0028 + + 47 1 1.492 39873.1 1.0 10583 5644 16210 HBL1_DMSO_200M_050219_1,16229 HBL1_DMSO_200M_050219_1,16229,LGASSDLCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16230 78.848 190.0 905510.0 25 0 88920.0 + 26703 NYPAFMMEM 9 161 575.2238595105873 1148.4331660879743 2 575.2247802615166 MULTI CID FTMS 0 0 0 16210 301220.5625 0.5931427960997911 3 -0.2788009643554687 20 Oxidation (M) _NYPAFMMEM(Oxidation (M))_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 48.345845343767074 0.0439967357579942 3 [YN]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MM 6 3 27.522 0.0 0.0 2.3965 0.0 0.0 0.0 312.13563912333893 312.13563912333893 6.575221787320515 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 [YN]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MM 2.3965 - 380 + 1 1.492 134881.2 1.0 10584 5644 16210 HBL1_DMSO_200M_050219_1,16230 HBL1_DMSO_200M_050219_1,16230,NYPAFMMEM True False NYPAFMMEM 78.84765 575.224780261517 6328198.0 16210.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 4.474185307820638 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16232 78.853 143.0 437260.0 25 0 94814.0 + 29692 QPFILLYVLGF 11 82 655.3817727593439 1308.7489925854877 2 655.3826782107353 MULTI CID FTMS 0 0 0 16231 474988.09375 0.1473678035007401 -6 0.493316650390625 1 Unmodified _QPFILLYVLGF_ REV__ENSG00000164742|ENST00000297323|ADCY1 1.3295316138638542 0.8688751186870782 3 {I|L} 1 -1 9.6041 0.0 0.0 0.73384 0.0 0.0 1177.653836801111 0.0 1177.653836801111 0.0 4.119543704721593 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.73384 + + 6 + 1 1.492 60711.6 1.0 10585 5645 16231 HBL1_DMSO_200M_050219_1,16232 HBL1_DMSO_200M_050219_1,16232,QPFILLYVLGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16233 78.856 147.0 760910.0 25 0 119680.0 + -1 MYRDYAMAAL 10 104 407.5190566783977 1219.5353406353931 3 407.5192443728447 MULTI CID FTMS 0 0 0 16231 692314.375 0.1948510421732012 -2 0.15496826171875 2 Oxidation (M) _M(Oxidation (M))YRDYAMAAL_ REV__ENSG00000197849|ENST00000641972|OR8G1 6.1918466704503565 0.6979955778746556 3 [Y{I|L}][WQ]Y{I|L}C[MT] 9 -1 + 46.36 0.0 0.0 3.8015 3.8015 70.777 0.0 0.0 0.0 1.249387366082999 1.249387366082999 1.249387366082999 1.249387366082999 0 0.9247425010840048 2.0 0.0 0.0 [Y{I|L}][WQ]Y{I|L}C[MT];[Y{I|L}][QA]DY{I|L}C[MT];{[{M(Oxidation (M))|F}C]|[YS]}C{I|L}YYV[Y{M(Oxidation (M))|F}];[Y{I|L}][QA]YD{I|L}C[MT];{[NV]|[RG]}DVYY{I|L}C[MT];[Y{I|L}][QA]Y{I|L}DC[MT];[Y{I|L}][{M(Oxidation (M))|F}V]{[QC]|[C(Carbamidomethyl (C))A]}{I|L}C[MT];{[NV]|[RG]}DV[NP]D{I|L}C[MT];[Y{I|L}][HN][EP]{I|L}C[MT];{[{M(Oxidation (M))|F}C]|[YS]}C{I|L}DY[Q{I|L}]C{I|L} 3.8015;3.699;3.699;3.699;3.4983;2.9595;2.902;2.7468;2.7201;2.4878 -;-;-;-;-;-;-;-;-;- 578 1 1.492 92069.5 1.0 10586 5645 16231 HBL1_DMSO_200M_050219_1,16233 HBL1_DMSO_200M_050219_1,16233,MYRDYAMAAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16234 78.857 70.0 2815600.0 25 0 202460.0 -1 QLWTFYMCL 9 128 610.7751342785782 1219.5357156239563 2 610.7757446169853 MULTI CID FTMS 0 0 0 16231 866401.1875 0.1847617384000005 -2 0.15496826171875 3 Oxidation (M) _QLWTFYM(Oxidation (M))CL_ ENST00000258341.4_1_1:183114505-183114610:+|nuORF 8.593279151180031 0.6146971463335029 3 {I|L}HC{I|L}YYV[Y{M(Oxidation (M))|F}] 9 -1 + 44.051 0.0 0.0 3.6121 3.6121 81.305 0.0 0.0 0.0 30.556387632578463 4.762036441594191 4.762036441594191 10.41325298820567 0 0.5 0.0 0.0 0.0 {I|L}HC{I|L}YYV[Y{M(Oxidation (M))|F}];{I|L}HC{I|L}Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KP]C;{I|L}HC{I|L}D[NP]V[Y{M(Oxidation (M))|F}];{I|L}HCDP{[QV]|[N{I|L}]|[RA]|[KV]}V[Y{M(Oxidation (M))|F}];{I|L}HCD{I|L}[NP]V[Y{M(Oxidation (M))|F}];{I|L}H{M(Oxidation (M))|F}[MT]YV[Y{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{I|L}C[MT];{[{M(Oxidation (M))|F}C]|[YS]}C{I|L}Y[NG][C(Carbamidomethyl (C))K]{I|L};{I|L}H[MT]{M(Oxidation (M))|F}YV[Y{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}C]|[YS]}C{I|L}Y[NG][KG]C{I|L} 3.6121;2.7583;2.7163;2.0371;1.9722;1.5202;1.4535;1.3332;1.2185;1.1795 -;-;-;-;-;-;-;-;-;- 548 + 1 1.492 144674.2 1.0 10587 5645 16231 HBL1_DMSO_200M_050219_1,16234 HBL1_DMSO_200M_050219_1,16234,QLWTFYMCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16235 78.859 100.0 1343300.0 25 0 227620.0 + 36128 SVTDLAFKV 9 140 490.2754511650902 978.5363493969804 2 490.2767211794853 MULTI CID FTMS 0 0 0 16231 525051.875 0.3671696889759364 -2 0.15496826171875 4 Unmodified _SVTDLAFKV_ ENSG00000061273|ENST00000080059|HDAC7;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7 39.94969957227396 0.0757326808254658 3 [VS]TD{I|L}A{M(Oxidation (M))|F}KV 9 0 + 71.741 0.0 0.0 7.3314 7.3314 90.003 0.0 0.0 0.0 23.256886463274284 7.900504736833511 7.900504736833511 7.900504736833511 0 0.7134679910804405 2.0 0.3494850021680094 0.2059771852360797 + + [VS]TD{I|L}A{M(Oxidation (M))|F}KV;[VS]TD{I|L}A{M(Oxidation (M))|F}VK;[VS]T{[VA]|[{I|L}G]}E{M(Oxidation (M))|F}KV;[VS]TD{I|L}AV{M(Oxidation (M))|F}K;[VS]T[W{I|L}]{M(Oxidation (M))|F}KV;[VS]T[TP]T{M(Oxidation (M))|F}KV;[VS]T{[VA]|[{I|L}G]}E{M(Oxidation (M))|F}VK;[VS][W{I|L}]T{M(Oxidation (M))|F}KV;[VS]T{[VA]|[{I|L}G]}V{I|L}[YQ];[VS]T[W{I|L}]{M(Oxidation (M))|F}VK 7.3314;6.524;5.7229;5.6983;5.0608;5.0086;4.9155;4.3591;4.2637;4.2534 +;-;-;-;-;-;-;-;-;- + 1263 + 1 1.492 107287.3 1.0 10588 5645 16231 HBL1_DMSO_200M_050219_1,16235 HBL1_DMSO_200M_050219_1,16235,SVTDLAFKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16236 78.862 97.0 671830.0 25 0 82057.0 + 24746 MPFFAKTV 8 92 470.7517557143012 939.4889584954024 2 470.7515136599541 MULTI CID FTMS 0 0 0 16231 474554.53125 0.422167877628085 3 -0.2911376953125 5 Unmodified _MPFFAKTV_ ENSG00000137815|ENST00000389629|RTF1 41.8396318013385 0.2035142800366642 3 MP{M(Oxidation (M))|F}{M(Oxidation (M))|F}AKTV 8 0 + 62.692 0.0 0.0 6.673 6.673 81.133 0.0 0.0 0.0 27.95880017344075 1.9188552623891293 1.9188552623891293 1.9188552623891293 0 0.6307196863200843 1.154901959985743 0.3054621874040891 0.0 + + MP{M(Oxidation (M))|F}{M(Oxidation (M))|F}AKTV;MP{M(Oxidation (M))|F}{M(Oxidation (M))|F}AKS{I|L};M[HD][{I|L}P]KTV;[QA][WH]AKTV;M[HD][{I|L}P]KS{I|L};[QA][WH]AKS{I|L} 6.673;6.4688;1.0299;0.91369;0.82562;0.70945 +;-;-;-;-;- + 308 + 1 1.492 55858.9 1.0 10589 5645 16231 HBL1_DMSO_200M_050219_1,16236 HBL1_DMSO_200M_050219_1,16236,MPFFAKTV False True MPFFAKTV 78.861539 470.751513659954 9896642.0 16231.0 ENSG00000137815|ENST00000389629|RTF1 6.292673746744792 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16237 78.864 115.0 710920.0 25 0 97478.0 + + 7778 RIDPALLTV 9 99 499.30519016706666 996.5958274009332 2 499.3058044314384 MULTI CID FTMS 0 0 0 16231 466739.875 0.5704637731222164 -2 0.15496826171875 6 Unmodified _ELGPLRLTV_ ENSG00000188211|ENST00000338965|NCR3LG1 29.081581746732265 0.1611639662936252 3 {NN|[MP]|[D{I|L}]|[EV]}R[PA]{I|L}{I|L}TV 9 -1 + 56.229 0.0 0.0 5.6421 5.6421 88.989 0.0 0.0 0.0 15.55732604037869 33.08481716238278 15.55732604037869 16.39471950216314 0 0.8252574989159953 1.3979400086720375 0.0 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}R[PA]{I|L}{I|L}TV;{[TV]|[{I|L}S]}{I|L}Q[VP]{I|L}EV;[{I|L}T]VQ[VP]{I|L}EV;[QA][KG][PA]{I|L}{I|L}TV;{[TV]|[{I|L}S]}{I|L}[AG][VP]{I|L}EV;[{I|L}T]V[AG][VP]{I|L}EV;[{I|L}P][KQ][QA]{I|L}TV;[QA][PG][KA]{I|L}{I|L}TV;{[QN]|[E{I|L}]|[KN]}[KA][VP]{I|L}EV;[QA][PG]RR{I|L}TV 5.6421;3.9971;3.6637;3.1737;3.0731;2.7397;2.725;2.5695;2.5682;1.9141 -;-;-;-;-;-;-;-;-;- 246 1 1.492 69457.3 1.0 10590 5645 16231 HBL1_DMSO_200M_050219_1,16237 HBL1_DMSO_200M_050219_1,16237,ELGPLRLTV False False RIDPALLTV 78.863933 499.305804431438 6317871.5 16231.0 ENSG00000188211|ENST00000338965|NCR3LG1 5.193347930908203 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16238 78.869 263.0 691530.0 25 0 112710.0 + 27870 PLRVPIGL 8 116 432.7867198579895 863.5588867827789 2 432.7867309451103 MULTI CID FTMS 0 0 0 16231 427606.65625 0.5233151009119015 -2 0.15496826171875 7 Unmodified _PLRVPIGL_ REV__ENST00000341735.3_1_15:90319632-90321465:+|nuORF 26.34127834903884 0.4900704351052977 3 {I|L}P{I|L} 3 -1 43.416 0.0 0.0 5.0276 0.0 0.0 0.0 537.3183077447874 537.3183077447874 28.812281309285623 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 {I|L}P{I|L} 5.0276 - 140 + 1 1.492 141382.0 1.0 10591 5645 16231 HBL1_DMSO_200M_050219_1,16238 HBL1_DMSO_200M_050219_1,16238,PLRVPIGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16239 78.87 65.0 563180.0 25 0 36497.0 -1 LLSVPNVPQCG 11 78 592.312484973917 1182.610417014634 2 592.3112670779228 MULTI CID FTMS 0 0 0 16231 369742.78125 0.1573154467106655 -2 0.15496826171875 8 Carbamidomethyl (C) _LLSVPNVPQC(Carbamidomethyl (C))G_ ENST00000356805.8_1_2:54895724-54895814:+|nuORF 17.11289562659939 0.6791789249425932 3 [VP]N[PA][YE]V 8 -1 28.618 0.0 0.0 2.4199 0.0 0.0 0.0 310.1776398699997 310.1776398699997 2.9318250140072166 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.3494850021680094 [VP]N[PA][YE]V 2.4199 - 139 1 1.492 36494.0 1.0 10592 5645 16231 HBL1_DMSO_200M_050219_1,16239 HBL1_DMSO_200M_050219_1,16239,LLSVPNVPQCG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16240 78.874 172.0 568970.0 25 0 39977.0 + 8743 EVPERFLEV 9 109 559.2975076911139 1116.5804624490277 2 559.2987548708916 MULTI CID FTMS 0 0 0 16231 337794.0625 0.900376296204486 4 -0.3477859497070312 9 Unmodified _EVPERFLEV_ ENSG00000117707|ENST00000366958|PROX1 28.23362336080872 0.1719529537093671 3 {NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}{I|L}[WP]EV 9 5 + 62.802 0.0 0.0 5.6245 5.6245 78.512 0.0 0.0 0.0 21.73393743112328 8.45098040014257 8.45098040014257 2.4742501084004687 0 0.8494850021680094 2.0 1.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}{I|L}[WP]EV;{NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}[WE]{I|L}PV;{NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[HQ]V;{NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}{I|L}[WP]D{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[HN]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KC]KSPVEV;{NN|[MP]|[D{I|L}]|[EV]}HH{[WT]|[RM]}{I|L}PV;{NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}[WE][VP]{I|L};[{I|L}T]{I|L}[WE]EVEV;{[QN]|[E{I|L}]|[KN]}MR{I|L}EVEV 5.6245;5.4029;5.1139;4.8676;4.357;3.9675;3.815;3.7755;3.7441;3.5584 -;-;-;-;-;-;-;-;-;- 427 + 1 1.492 82497.8 1.0 10593 5645 16231 HBL1_DMSO_200M_050219_1,16240 HBL1_DMSO_200M_050219_1,16240,EVPERFLEV False True EVPERFLEV 78.873748 559.298754870892 5668782.0 16231.0 ENSG00000117707|ENST00000366958|PROX1 6.390555699666341 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16241 78.876 129.0 1045900.0 25 0 130940.0 + 3714 DAFPSIDKI 9 132 503.2652076776927 1004.5158624221854 2 503.2661926150322 MULTI CID FTMS 0 0 0 16231 318251.09375 0.1124176750886025 -9 0.74920654296875 10 Unmodified _DAFPSIDKI_ ENSG00000136379|ENST00000258884|ABHD17C 41.95555342248728 0.0647214845423414 3 {[DA]|[EG]}{M(Oxidation (M))|F}PS{I|L}DK{I|L} 9 0 + 53.387 0.0 0.0 5.3147 5.3147 86.421 0.0 0.0 0.0 22.677287669604308 11.962724883926654 11.962724883926654 9.948500216800936 0 0.3494850021680094 1.3010299956639813 0.6861818737241735 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}PS{I|L}DK{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}[PS]DK{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}PS{I|L}[VS]G{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}PS{I|L}[VS]AV;{[DA]|[EG]}{M(Oxidation (M))|F}PS{I|L}[{I|L}T]AA;W{M(Oxidation (M))|F}PST[RV]{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}[PS][VS]G{I|L};W{M(Oxidation (M))|F}PST[R{I|L}]V;{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}[PS][VS]AV;{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}[PS][{I|L}T]AA 5.3147;4.3244;3.8591;3.3841;2.9555;2.8953;2.8687;2.4203;2.3937;1.9651 +;-;-;-;-;-;-;-;-;- + 556 + 1 1.492 105570.7 1.0 10594 5645 16231 HBL1_DMSO_200M_050219_1,16241 HBL1_DMSO_200M_050219_1,16241,DAFPSIDKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16242 78.886 576.0 650140.0 25 0 139410.0 + 45944 YYYDPTTGLYY 11 176 709.811092827262 1417.607632721324 2 709.8109619021416 MULTI CID FTMS 0 0 0 16231 321216.1875 0.1748473207883164 -2 0.15496826171875 11 Unmodified _YYYDPTTGLYY_ ENSG00000003756|ENST00000347869|RBM5;ENST00000489437.1_1_3:50144918-50148299:+|nuORF 65.23502041540118 0.047899150100457 3 [TP]TG{I|L}YDYYYY 11 8 + 73.436 0.0 0.0 5.1803 5.1803 77.912 0.0 0.0 0.0 8.349951794538484 10.550088832413516 8.349951794538484 3.0102999566398125 0 0.8182503180159344 0.8860566476931632 2.6866654986684733 0.0 [TP]TG{I|L}YDYYYY;[TP]TG{I|L}YYDYYY;{[QN]|[E{I|L}]|[KN]}N{I|L}YDYYYY;{[QN]|[E{I|L}]|[KN]}GG{I|L}YDYYYY;[TP]TG{I|L}YYYDYY;{[VA]|[{I|L}G]}EG{I|L}YDYYYY;[TP]TG{I|L}DYYYYY;[TP]TGY{I|L}DYYYY;{[QN]|[E{I|L}]|[KN]}N{I|L}YYDYYY;{[QN]|[E{I|L}]|[KN]}GG{I|L}YYDYYY 5.1803;4.968;4.5913;4.5671;4.5091;4.4901;4.4407;4.4407;4.3789;4.3547 -;-;-;-;-;-;-;-;-;- 24315 1 1.492 260778.8 1.0 10595 5645 16231 HBL1_DMSO_200M_050219_1,16242 HBL1_DMSO_200M_050219_1,16242,YYYDPTTGLYY True True YYYDPTTGLYY 78.886477 709.810961902142 7331953.5 16231.0 ENSG00000003756|ENST00000347869|RBM5;;ENST00000489437.1_1_3:50144918-50148299:+|nuORF 4.857442696889241 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16243 78.893 341.0 693820.0 25 0 59559.0 + 947 AFLDSQTATF 10 222 550.7663236761862 1099.5180944191725 2 550.7669555544853 MULTI CID FTMS 0 0 0 16231 229977.390625 0.4803512143375958 -2 0.15496826171875 12 Unmodified _AFLDSQTATF_ ENSG00000070061|ENST00000374647|ELP1 32.30548876998284 0.2428506522065767 3 T{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}T{M(Oxidation (M))|F} 7 6 30.755 0.0 0.0 2.7971 0.0 0.0 254.12656717483475 0.0 254.12656717483475 0.0 8.126301638901985 0.0 0.0 0 0.0 0.0 0.535666875892183 0.0 T{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}T{M(Oxidation (M))|F} 2.7971 - 4722 + 1 1.492 176688.2 1.0 10596 5645 16231 HBL1_DMSO_200M_050219_1,16243 HBL1_DMSO_200M_050219_1,16243,AFLDSQTATF False True AFLDSQTATF 78.892656 550.766955554485 3471883.0 16231.0 ENSG00000070061|ENST00000374647|ELP1 4.6786683400472 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16244 78.901 496.0 481290.0 25 0 48151.0 + 5149 DIISRIPKI 9 202 352.2251925286696 1053.6537481862088 3 352.2251464724541 MULTI CID FTMS 0 0 0 16231 200787.84375 0.5426545399817269 2 -0.2431564331054687 13 Unmodified _DIISRIPKI_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 22.65808497894818 0.2428932432760099 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}S 4 5 45.802 0.0 0.0 4.347 0.0 0.0 0.0 622.4028846780133 622.4028846780133 14.237504315312268 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.8494850021680094 0.0 + {NN|[MP]|[D{I|L}]|[EV]}{I|L}S 4.347 + + 202 + 1 1.492 190454.9 1.0 10597 5645 16231 HBL1_DMSO_200M_050219_1,16244 HBL1_DMSO_200M_050219_1,16244,DIISRIPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16245 78.905 171.0 452780.0 25 0 38173.0 + 33335 SFYPRNITL 9 105 555.8004141439524 1109.5862753547046 2 555.8008911013603 MULTI CID FTMS 0 0 0 16231 197810.65625 1.0 0 0.0 14 Unmodified _SFYPRNITL_ ENSG00000204516|ENST00000252229|MICB;nc|ENSG00000204516|Q29980-2|MICB 26.268140514670165 0.1969607489560049 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L} 4 5 38.94 0.0 0.0 3.5094 0.0 0.0 0.0 596.3180636041624 596.3180636041624 19.331232596199204 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L} 3.5094 - 315 + 1 1.492 63477.5 1.0 10598 5645 16231 HBL1_DMSO_200M_050219_1,16245 HBL1_DMSO_200M_050219_1,16245,SFYPRNITL False True SFYPRNITL 78.904775 555.80089110136 4098037.0 16231.0 nc|ENSG00000204516|Q29980-2|MICB;;ENSG00000204516|ENST00000252229|MICB 6.171525160471599 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16246 78.919 732.0 218990.0 25 0 10074.0 9077 FFFFFFFRWSL 11 171 795.8975547093709 1589.7805564855416 2 795.8972656130791 MULTI CID FTMS 0 0 0 16231 189529.25 1.0 0 0.0 15 Unmodified _FFFFFFFRWSL_ nc|ENSG00000137090|Q9Y5R6-3|DMRT1 2.9952420565917617 0.861016188266951 3 {[QV]|[N{I|L}]|[RA]|[KV]}NADQ[{M(Oxidation (M))|F}V][WR]QS{I|L} 13 8 + 77.989 0.0 0.0 4.9057 4.9057 76.105 0.0 0.0 0.0 23.16310225257976 14.25647270716977 14.25647270716977 2.5 0 2.4049471895720984 2.0 0.6861818737241735 1.0189301784845295 {[QV]|[N{I|L}]|[RA]|[KV]}NADQ[{M(Oxidation (M))|F}V][WR]QS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NA{M(Oxidation (M))|F}W[HV]{[{M(Oxidation (M))|F}D]|MM}QS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NWQ[{M(Oxidation (M))|F}V][WR]QS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T{[HG]|PP}{[WS]|[C(Carbamidomethyl (C)){I|L}]}MG{M(Oxidation (M))|F}{I|L}QS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NADQRRA[W{M(Oxidation (M))|F}]S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NADQRRW{[MS]|[{M(Oxidation (M))|F}A]}S{I|L};[{I|L}P]PSVA[C(Carbamidomethyl (C))S]DG{M(Oxidation (M))|F}{I|L}QS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NADQRRAD{[MS]|[{M(Oxidation (M))|F}A]}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NA{M(Oxidation (M))|F}W[HV]G[W{M(Oxidation (M))|F}]S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A[HS]{[WS]|[C(Carbamidomethyl (C)){I|L}]}MG{M(Oxidation (M))|F}{I|L}QS{I|L} 4.9057;4.7484;4.5485;4.4973;3.7499;3.6391;3.5531;3.4905;3.45;3.4322 -;-;-;-;-;-;-;-;-;- 3783 + 1 1.492 110866.9 1.0 10599 5645 16231 HBL1_DMSO_200M_050219_1,16246 HBL1_DMSO_200M_050219_1,16246,FFFFFFFRWSL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16247 78.922 148.0 505400.0 25 0 50639.0 7711 ELCRAALESL 10 105 552.7893612215938 1103.5641695099876 2 552.7902709841728 MULTI CID FTMS 0 0 0 16231 135521.375 0.0338151755663382 4 -0.3477859497070312 16 Unmodified _ELCRAALESL_ ENST00000378169.7_1_1:5965468-6021937:-|nuORF;ENST00000478423.6_1_1:5965468-6029316:-|nuORF 24.020572477871973 0.4289996903560794 3 {I|L}VE{I|L} 4 7 33.972 0.0 0.0 3.0784 0.0 0.0 631.2742236220475 0.0 631.2742236220475 0.0 10.627392415351284 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {I|L}VE{I|L} 3.0784 - 146 1 1.492 62940.1 1.0 10600 5645 16231 HBL1_DMSO_200M_050219_1,16247 HBL1_DMSO_200M_050219_1,16247,ELCRAALESL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16248 78.934 710.0 163340.0 25 0 16287.0 + 23415 LTELIKHQLLY 11 200 685.9082605941485 1369.8019682550969 2 686.4096557497978 MULTI CID FTMS 0 0 0 16231 118869.28125 0.4523507494768402 -2 0.15496826171875 17 Unmodified _LTELIKHQLLY_ REV__ENSG00000158863|ENST00000289921|FHIP2B;REV__ENST00000488968.1_1_8:21953801-21954290:+|nuORF;REV__ENST00000498344.2_1_8:21946698-21954290:+|nuORF 5.296884461304476 0.8501568894076437 3 [{I|L}T]E{I|L} 4 -1 18.549 0.0 0.0 1.3542 0.0 0.0 0.0 910.5205711205843 910.5205711205843 8.460696996448576 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.1549471895720985 0.0 [{I|L}T]E{I|L} 1.3542 + + 389 1 1.492 89524.9 1.0 10601 5645 16231 HBL1_DMSO_200M_050219_1,16248 HBL1_DMSO_200M_050219_1,16248,LTELIKHQLLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16249 78.947 750.0 128470.0 25 0 29002.0 -1 0 94 994.9442665832944 1987.8739802333887 2 994.9466430544852 MULTI CID FTMS 0 0 0 -1 0 18 3 [{I|L}T]N[W{I|L}]VH{I|L} 8 -1 37.796 0.0 0.0 1.9013 0.0 0.0 0.0 1008.3169483332512 1008.3169483332512 14.758497939450308 0.0 0.0 0.0 0 0.0 2.0 0.9247425010840048 0.0 [{I|L}T]N[W{I|L}]VH{I|L} 1.9013 - 970 1 1.492 70693.9 1.0 10602 5645 16231 HBL1_DMSO_200M_050219_1,16249 HBL1_DMSO_200M_050219_1,16249, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16250 78.962 797.0 145860.0 25 0 9327.0 27680 PLILELINKN 10 163 583.8601322787451 1165.7057116242902 2 583.8613769412041 MULTI CID FTMS 0 0 0 16231 117904.2734375 0.2299517056754105 4 -0.3477859497070312 19 Unmodified _PLILELINKN_ ENSG00000106692|ENST00000357998|FKTN;nc|ENSG00000106692|O75072-2|FKTN 3.944395688203298 0.708391353636983 3 {I|L} 1 9 11.259 0.0 0.0 0.96586 0.0 0.0 1034.6106321338589 0.0 1034.6106321338589 0.0 1.426178642403748 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.96586 + + 250 + 1 1.492 88404.0 1.0 10603 5645 16231 HBL1_DMSO_200M_050219_1,16250 HBL1_DMSO_200M_050219_1,16250,PLILELINKN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16251 78.976 800.0 267770.0 25 0 19596.0 + 39454 VAPLIAKL 8 190 412.7838289800389 823.5531050268778 2 412.7840453982353 MULTI CID FTMS 0 0 0 16231 115765.7109375 0.84831223317085 -1 0.03564453125 20 Unmodified _VAPLIAKL_ ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12 30.22481116460888 0.4082965392918993 3 {[VA]|[{I|L}G]}P{I|L}{I|L}AK{I|L} 8 0 + 56.22 0.0 0.0 6.8265 6.8265 85.789 0.0 0.0 0.0 16.37714364165881 12.5190243216651 12.5190243216651 4.771212547196626 0 0.3252574989159953 1.6989700043360187 0.0 0.1643943297944484 + + {[VA]|[{I|L}G]}P{I|L}{I|L}AK{I|L};{[VA]|[{I|L}G]}{I|L}P{I|L}AK{I|L};[{I|L}P]{I|L}[KA]AV{I|L};[{I|L}P]A[K{I|L}]AV{I|L};{[VA]|[{I|L}G]}{I|L}K{I|L}{I|L}AP;{I|L}{I|L}P[KA]AV{I|L};[{I|L}A]K[{I|L}P]AV{I|L};[{I|L}A]P[K{I|L}]AV{I|L} 6.8265;6.2472;3.32;2.1613;1.2429;0.78951;0.64363;0.42981 +;-;-;-;-;-;-;- + 297 + 1 1.492 164256.7 0.6800000071525574 10604 5645 16231 HBL1_DMSO_200M_050219_1,16251 HBL1_DMSO_200M_050219_1,16251,VAPLIAKL False True VAPLIAKL 78.975812 412.784045398235 1684307.75 16231.0 ENSG00000184634|ENST00000374080|MED12;;nc|ENSG00000184634|Q93074-2|MED12;;nc|ENSG00000184634|Q93074-3|MED12 3.762335618336996 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16253 78.98 11.0 4737500.0 25 0 692150.0 39687 VEERNLLSV 9 60 529.795747983749 1057.576943034298 2 529.7960693240166 MULTI CID FTMS 0 0 0 16252 3727192.5 0.5958641934650487 1 -0.114898681640625 1 Unmodified _VEERNLLSV_ ENSG00000108953|ENST00000264335|YWHAE;ENST00000486241.1_1_17:1265194-1303470:-|nuORF;ENST00000489287.1_1_17:1268113-1303470:-|nuORF;nc|ENSG00000108953|P62258-2|YWHAE 18.1463463914782 0.3454829746528889 3 KD{I|L}{I|L}W 5 7 37.959 0.0 0.0 3.5892 0.0 0.0 384.1830311505875 0.0 384.1830311505875 0.0 16.989700043360187 0.0 0.0 0 0.0 0.0 0.0 0.0 KD{I|L}{I|L}W 3.5892 - 62 1 1.521 47131.9 1.0 10605 5646 16252 HBL1_DMSO_200M_050219_1,16253 HBL1_DMSO_200M_050219_1,16253,VEERNLLSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16254 78.981 20.0 2558800.0 25 0 211680.0 + 18267 KVIEINPYL 9 79 544.8207883877005 1087.627023842201 2 544.8212158083916 MULTI CID FTMS 0 0 0 16252 1640403.5 0.2164189378304153 3 -0.2195281982421875 2 Unmodified _KVIEINPYL_ ENSG00000100804|ENST00000361611|PSMB5;ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000100804|P28074-2|PSMB5;nc|ENSG00000204264|P28062-2|PSMB8 22.736283301280096 0.2418982879461534 3 {I|L}NPY{I|L} 5 4 34.693 0.0 0.0 3.1898 0.0 0.0 469.29051406074376 0.0 469.29051406074376 0.0 8.987030248381913 0.0 0.0 0 1.1237125054200234 0.0 0.0 0.4247425010840047 + {I|L}NPY{I|L} 3.1898 + + 208 1 1.521 51601.2 1.0 10606 5646 16252 HBL1_DMSO_200M_050219_1,16254 HBL1_DMSO_200M_050219_1,16254,KVIEINPYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16255 78.983 33.0 2104800.0 25 0 245590.0 + 39934 VFVDRTLDL 9 76 539.3006551795852 1076.5867574259703 2 539.3010131716728 MULTI CID FTMS 0 0 0 16252 1990986.875 0.2384854689402671 -6 0.52484130859375 3 Unmodified _VFVDRTLDL_ ENSG00000184178|ENST00000401642|SCFD2;nc|ENSG00000184178|Q8WU76-2|SCFD2 32.037481411007896 0.1235546156350648 3 DVD{I|L} 4 6 33.66 0.0 0.0 3.1265 0.0 0.0 616.3527088849625 0.0 616.3527088849625 0.0 15.00116426237743 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 DVD{I|L} 3.1265 - 119 1 1.521 61978.0 1.0 10607 5646 16252 HBL1_DMSO_200M_050219_1,16255 HBL1_DMSO_200M_050219_1,16255,VFVDRTLDL True True VFVDRTLDL 78.982672 539.301013171673 77622440.0 16252.0 ENSG00000184178|ENST00000401642|SCFD2;;nc|ENSG00000184178|Q8WU76-2|SCFD2 4.5597585042317705 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16256 78.984 32.0 2710800.0 25 0 285730.0 + 21934 LPPKVSVFV 9 94 493.30750595992856 984.6004589866571 2 493.3081542849541 MULTI CID FTMS 0 0 0 16252 1937577.5 0.1318817752190068 30 -2.0373458862304688 4 Unmodified _LPPKVSVFV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 36.12702656103203 0.0967173616627612 3 [KP]VSVP{I|L}{M(Oxidation (M))|F}V 9 4 + 55.601 0.0 0.0 5.647 5.647 85.258 0.0 0.0 0.0 3.979400086720375 22.63174048436923 3.979400086720375 8.494850021680094 0 0.5 0.0 1.1549471895720984 0.0 [KP]VSVP{I|L}{M(Oxidation (M))|F}V;[KP]VSVP{M(Oxidation (M))|F}{I|L}V;[KP]VSPV{I|L}{M(Oxidation (M))|F}V;[KP]VSV{M(Oxidation (M))|F}P{I|L}V;[{I|L}P]G[Q{I|L}]V{I|L}{M(Oxidation (M))|F}V;[VS][KP]VP{I|L}{M(Oxidation (M))|F}V;[KP]VPSV{I|L}{M(Oxidation (M))|F}V;[{I|L}P]GKPYV{I|L}V;[{I|L}P]G[Q{I|L}]V{M(Oxidation (M))|F}{I|L}V;[KP]PVSV{I|L}{M(Oxidation (M))|F}V 5.647;4.7843;4.4253;4.3976;4.3689;4.3541;3.9407;3.9142;3.8611;3.635 -;-;-;-;-;-;-;-;-;- 931 1 1.521 71461.6 1.0 10608 5646 16252 HBL1_DMSO_200M_050219_1,16256 HBL1_DMSO_200M_050219_1,16256,LPPKVSVFV True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16257 78.985 45.0 1525700.0 25 0 270560.0 + 2992 AVIHEAPAVLL 11 86 566.8401751682837 1131.6657974033674 2 566.8403198122978 MULTI CID FTMS 0 0 0 16252 1376736.5 0.6607075230753495 1 -0.114898681640625 5 Unmodified _AVIHEAPAVLL_ ENSG00000146232|ENST00000619360|NFKBIE;nc|ENSG00000146232|O00221|NFKBIE 17.04857598603903 0.6805168445818576 3 EAPAV{I|L}{I|L} 7 4 42.479 0.0 0.0 3.7537 0.0 0.0 420.2487354962906 0.0 420.2487354962906 0.0 26.16660094933607 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + EAPAV{I|L}{I|L} 3.7537 + + 221 1 1.521 56580.3 1.0 10609 5646 16252 HBL1_DMSO_200M_050219_1,16257 HBL1_DMSO_200M_050219_1,16257,AVIHEAPAVLL False True AVIHEAPAVLL 78.985095 566.840319812298 91000620.0 16252.0 nc|ENSG00000146232|O00221|NFKBIE;;ENSG00000146232|ENST00000619360|NFKBIE 7.714810053507487 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16258 78.987 89.0 1378100.0 25 0 216730.0 + 30887 RIPEQIIVV 9 105 533.8349137178119 1065.6552745024237 2 533.8350707888603 MULTI CID FTMS 0 0 0 16252 915538.625 0.5482908666635176 -1 0.1282577514648437 6 Unmodified _RIPEQIIVV_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 19.361941925380144 0.3125782356748823 3 [{I|L}V][WP]Q{I|L}{I|L}VV 9 2 + 49.895 0.0 0.0 4.6821 4.6821 82.372 0.0 0.0 0.0 8.440899702813027 36.70696227168975 8.440899702813027 9.030899869919438 0 0.5 1.3010299956639813 0.0 0.0 [{I|L}V][WP]Q{I|L}{I|L}VV;[R{I|L}][EP]Q{I|L}{I|L}VV;[{I|L}V][WP][AG]{I|L}{I|L}VV;[VP][W{I|L}]Q{I|L}{I|L}VV;[R{I|L}][EP][AG]{I|L}{I|L}VV;{[CP]|[EA]}[PG][R{I|L}]{I|L}{I|L}VV;[VP][W{I|L}][AG]{I|L}{I|L}VV 4.6821;3.8346;3.818;3.5041;2.9705;2.6849;2.64 -;+;-;-;-;-;- + 117 1 1.521 101039.1 1.0 10610 5646 16252 HBL1_DMSO_200M_050219_1,16258 HBL1_DMSO_200M_050219_1,16258,RIPEQIIVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16259 78.989 83.0 1640300.0 25 0 197710.0 + 29935 QSLGELHVL 9 129 498.279559964952 994.544566996704 2 498.2798644900322 MULTI CID FTMS 0 0 0 16252 741605.25 0.2063296083813298 -1 0.1282577514648437 7 Unmodified _QSLGELHVL_ ENST00000266771.9_1_12:129278384-129278573:-|nuORF 49.93300154707207 0.0405168250806675 3 {[QS]|[NT]}{I|L}G{I|L}EVH{I|L} 9 3 + 71.512 0.0 0.0 7.1904 7.1904 87.763 0.0 0.0 0.0 19.366130211356065 5.88271706842329 5.88271706842329 5.88271706842329 0 1.086696871556164 1.2218487496163564 0.7614393726401688 0.0 {[QS]|[NT]}{I|L}G{I|L}EVH{I|L};{[QS]|[NT]}{I|L}G{I|L}EV{I|L}H;{[QS]|[NT]}{I|L}G{I|L}E{I|L}HV;{[QS]|[NT]}VA{I|L}EVH{I|L};{[QS]|[NT]}{I|L}G{I|L}E{I|L}VH;{[QS]|[NT]}VA{I|L}EV{I|L}H;DT{I|L}{I|L}{[QG]|[NA]}VH{I|L};{[QS]|[NT]}{I|L}{[CP]|[EA]}VVH{I|L};{[QS]|[NT]}VA{I|L}E{I|L}HV;DT{I|L}{I|L}{[QG]|[NA]}V{I|L}H 7.1904;6.5989;5.9283;5.8752;5.5138;5.2837;4.8635;4.739;4.6131;4.272 -;-;-;-;-;-;-;-;-;- 2061 + 1 1.521 109351.6 1.0 10611 5646 16252 HBL1_DMSO_200M_050219_1,16259 HBL1_DMSO_200M_050219_1,16259,QSLGELHVL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16260 78.991 107.0 595390.0 25 0 106220.0 26769 PAFSLVFPFLK 11 85 633.3689732899979 1264.7233936467958 2 633.3680908083916 MULTI CID FTMS 0 0 0 16252 588899.9375 0.18176152601302 10 -0.8588409423828125 8 Unmodified _PAFSLVFPFLK_ ENSG00000089154|ENST00000300648|GCN1 9.38312468134398 0.8308777417566128 3 [{I|L}V]TVC 5 9 30.379 0.0 0.0 2.402 0.0 0.0 0.0 746.4244183872833 746.4244183872833 22.944087325889985 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.8494850021680094 0.0 [{I|L}V]TVC 2.402 - 170 1 1.521 56631.5 1.0 10612 5646 16252 HBL1_DMSO_200M_050219_1,16260 HBL1_DMSO_200M_050219_1,16260,PAFSLVFPFLK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16261 78.995 208.0 506840.0 25 0 30261.0 + -1 KLSECVPSL 9 111 974.9628167210068 1947.9110805088133 2 975.4642211794852 MULTI CID FTMS 0 0 0 16252 344666.25 0.2512481859127049 -5 0.4547958374023437 9 ENSG00000109762|ENST00000652585|SNX25;ENST00000504959.5_1_4:186260544-186290945:+|nuORF;nc|ENSG00000109762|Q9H3E2|SNX25;nc|ENSG00000109762|Q9H3E2-2|SNX25 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[DP]NADQV{[CT]|[{M(Oxidation (M))|F}G]}VWQ{[TV]|[{I|L}S]} 17 -1 + 47.266 0.0 0.0 2.4265 2.4265 72.149 0.0 0.0 0.0 32.2264622560731 4.249045959410793 4.249045959410793 3.71611069949688 0 0.75 0.0 1.2856668758921828 0.6694451763165201 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[DP]NADQV{[CT]|[{M(Oxidation (M))|F}G]}VWQ{[TV]|[{I|L}S]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[DP]NADQ[R{M(Oxidation (M))|F}]VWQ{[TV]|[{I|L}S]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}YYADQV{[CT]|[{M(Oxidation (M))|F}G]}VWQ{[TV]|[{I|L}S]};[NP]VQW[NP]VQDAN[DP]{I|L}{[QN]|[E{I|L}]|[KN]};[NP]{I|L}NW[NP]VQDAN[DP]{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[DP]NWQV{[CT]|[{M(Oxidation (M))|F}G]}VWQ{[TV]|[{I|L}S]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[DP]NADQ[RV]{M(Oxidation (M))|F}WQ{[TV]|[{I|L}S]};[NP]VQ{M(Oxidation (M))|F}[H{I|L}]VQDAN[DP]{I|L}{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N{M(Oxidation (M))|F}[H{I|L}]VQDAN[DP]{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YDQV{[CT]|[{M(Oxidation (M))|F}G]}VWQ{[TV]|[{I|L}S]} 2.4265;2.2357;1.9142;1.8737;1.8737;1.8631;1.8382;1.8115;1.8115;1.7597 -;-;-;-;-;-;-;-;-;- 5365 + 1 1.521 73164.5 1.0 10613 5646 16252 HBL1_DMSO_200M_050219_1,16261 HBL1_DMSO_200M_050219_1,16261, False False KLSECVPSL 78.995224 974.9632 3138645.0 16252.0 ENSG00000109762|ENST00000652585|SNX25;;ENST00000504959.5_1_4:186260544-186290945:+|nuORF;;nc|ENSG00000109762|Q9H3E2|SNX25;;nc|ENSG00000109762|Q9H3E2-2|SNX25 0.2449849446614583 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16262 78.998 147.0 820610.0 25 0 101500.0 + 10241 FQPYPLPHV 9 119 549.2948762040522 1096.5751994749044 2 549.2919189333916 MULTI CID FTMS 0 0 0 16252 303163.75 0.2909434172988678 5 -0.4142303466796875 10 Unmodified _FQPYPLPHV_ ENSG00000179335|ENST00000395066|CLK3;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;ENST00000569406.5_1_15:74914809-74922221:+|nuORF;nc|ENSG00000179335|P49761-3|CLK3 26.34127834903884 0.1960301806784604 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PYV[{I|L}T]MV 9 3 + 36.803 0.0 0.0 3.3562 3.3562 68.219 0.0 0.0 0.0 -0.7249559523478908 0.4500481306201678 -0.7249559523478908 0.4255235068546312 0 0.5 0.9208187539523752 1.079689690656103 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PYV[{I|L}T]MV;[VS][Y{I|L}]VYP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PY[{I|L}P]PHV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}PHV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[TV]|[{I|L}S]}[YV]VYP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{M(Oxidation (M))|F}T][{I|L}T]VYP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV]{[TV]|[{I|L}S]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{I|L}P]PHV;[VS][Y{I|L}]VNQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[{I|L}T]MV 3.3562;3.3174;3.2225;3.1088;2.8935;2.3445;1.8804;1.7662;1.7192;1.5812 -;-;+;-;-;-;-;-;-;- + 574 + 1 1.521 98339.3 1.0 10614 5646 16252 HBL1_DMSO_200M_050219_1,16262 HBL1_DMSO_200M_050219_1,16262,FQPYPLPHV False True FQPYPLPHV 78.998176 549.291918933392 12365875.0 16252.0 ENSG00000179335|ENST00000395066|CLK3;;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;;nc|ENSG00000179335|P49761-3|CLK3;;ENST00000569406.5_1_15:74914809-74922221:+|nuORF 7.366824626922607 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16263 79.01 673.0 156870.0 25 0 10959.0 + -1 YYCCEEGLFLC 11 139 728.7860136633772 0 728.7854492068291 PEAK CID FTMS 0 0 0 16252 256292.359375 1.0 0 0.0 11 2 Carbamidomethyl (C) _YYC(Carbamidomethyl (C))C(Carbamidomethyl (C))EEGLFLC_ REV__ENSG00000242950|ENST00000603053|ERVW-1 13.90604991867851 0.4141907700618076 3 AAPD 4 -1 19.702 0.0 0.0 1.3536 0.0 0.0 890.3013231257793 208.07270227603752 1098.3740254018169 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 AAPD 1.3536 - 323 + 1 1.521 78201.2 1.0 10615 5646 16252 HBL1_DMSO_200M_050219_1,16263 HBL1_DMSO_200M_050219_1,16263,YYCCEEGLFLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16264 79.022 705.0 241240.0 25 0 27597.0 + -1 LPLPWPLMILS 11 204 648.3743617341019 1294.7341705350036 2 648.3745605349541 MULTI CID FTMS 0 0 0 16252 236948.9375 0.0896256942641851 -5 0.4547958374023437 12 Oxidation (M) _LPLPWPLM(Oxidation (M))ILS_ REV__ENSG00000174939|ENST00000308748|ASPHD1 8.745405648335112 0.8338865417133445 3 {I|L} 1 -1 9.6777 0.0 0.0 0.74747 0.0 0.0 1163.6390757857832 0.0 1163.6390757857832 0.0 0.5290186308401967 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.74747 + + 539 + 1 1.521 139725.8 1.0 10616 5646 16252 HBL1_DMSO_200M_050219_1,16264 HBL1_DMSO_200M_050219_1,16264,LPLPWPLMILS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16265 79.026 212.0 323570.0 25 0 17538.0 + 30610 RFFDTNTSVL 10 111 600.3061654567218 1198.5977779802436 2 600.3062621951103 MULTI CID FTMS 0 0 0 16252 234941.1875 0.0726150961150702 5 -0.4142303466796875 13 Unmodified _RFFDTNTSVL_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 33.4449034751529 0.2267874087365337 3 G[PS]TNTSV{I|L} 9 4 54.575 0.0 0.0 4.5532 0.0 0.0 324.15037734199376 0.0 324.15037734199376 0.0 41.47608139917317 0.0 0.0 0 0.5 0.0 1.274227503252014 0.0 G[PS]TNTSV{I|L} 4.5532 - 220 1 1.521 52602.3 1.0 10617 5646 16252 HBL1_DMSO_200M_050219_1,16265 HBL1_DMSO_200M_050219_1,16265,RFFDTNTSVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16266 79.03 199.0 1229900.0 25 0 122640.0 + 12656 GVLGPIINKV 10 216 505.32379044053886 1008.6330279478776 2 505.3238403201103 MULTI CID FTMS 0 0 0 16252 231235.3125 0.1423566477543467 -5 0.4547958374023437 14 Unmodified _GVLGPIINKV_ ENSG00000105808|ENST00000262940|RASA4;ENSG00000170667|ENST00000465829|RASA4B;ENST00000523568.1_7:102228019-102246337:-|nuORF;nc|ENSG00000105808|O43374-2|RASA4 49.93300154707207 0.0805441195901191 3 [VG]{I|L}GP{I|L}{I|L}NKV 10 0 + 68.638 0.0 0.0 6.8051 6.8051 89.684 0.0 0.0 0.0 24.296641831149216 6.73393743112328 6.73393743112328 9.164539485499256 0 0.8252574989159953 1.6989700043360187 0.0 0.4802046884880938 + + [VG]{I|L}GP{I|L}{I|L}NKV;[VG]{I|L}GP{I|L}{I|L}GGKV;[VG]{I|L}GP{I|L}[KQ]VV 6.8051;5.8964;4.6613 +;-;- + 4640 + 1 1.521 181919.3 1.0 10618 5646 16252 HBL1_DMSO_200M_050219_1,16266 HBL1_DMSO_200M_050219_1,16266,GVLGPIINKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16267 79.036 344.0 665800.0 25 0 62154.0 + 25336 NALDKVLSV 9 212 479.78167184933096 957.548790765462 2 479.7805663943291 MULTI CID FTMS 0 0 0 16252 183464.796875 0.0407811198254722 5 -0.4142303466796875 15 Unmodified _NALDKVLSV_ ENSG00000159063|ENST00000299626|ALG8;ENST00000524925.1_1_11:77817969-77825348:-|nuORF;nc|ENSG00000159063|Q9BVK2-2|ALG8 41.95555342248728 0.0647214845423414 3 {[QG]|[NA]}{I|L}[R{M(Oxidation (M))|F}]PK{I|L} 8 6 + 53.241 0.0 0.0 5.5601 5.5601 85.433 0.0 0.0 0.0 20.399398576398298 6.686048629533218 6.686048629533218 9.059100297186973 0 0.9247425010840048 2.0 0.0 0.1139829889124311 {[QG]|[NA]}{I|L}[R{M(Oxidation (M))|F}]PK{I|L};{[QG]|[NA]}{I|L}VV[QT]T{I|L};{[QG]|[NA]}{I|L}[R{M(Oxidation (M))|F}][K{I|L}]P;{NN|[MP]|[D{I|L}]|[EV]}KV{I|L}QGSV;[{I|L}T]Q{I|L}{I|L}QGSV;[VS]G{I|L}V{I|L}QGSV;[VS]GV{I|L}{I|L}QGSV;{NN|[MP]|[D{I|L}]|[EV]}KV{I|L}SQR;{[VA]|[{I|L}G]}[VS]V{I|L}QGSV;{[VA]|[{I|L}G]}[TA]{I|L}{I|L}QGSV 5.5601;4.614;3.1813;3.0453;2.9274;2.7815;2.7562;2.6514;2.5819;2.5566 -;-;-;-;-;-;-;-;-;- 2686 + 1 1.521 174498.3 1.0 10619 5646 16252 HBL1_DMSO_200M_050219_1,16267 HBL1_DMSO_200M_050219_1,16267,NALDKVLSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16268 79.051 800.0 242990.0 25 0 18664.0 -1 0 155 759.6790773512039 2276.015402653812 3 760.0127441287041 MULTI CID FTMS 0 0 0 16252 166476.484375 0.4288528224884576 -2 0.1639022827148437 16 3 YMDASY 6 -1 46.899 0.0 0.0 2.0606 0.0 0.0 320.1544933642918 1222.5763295453198 1542.7308229096116 0.0 0.0 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 YMDASY 2.0606 - 555 + 1 1.521 163368.2 0.9900000095367432 10620 5646 16252 HBL1_DMSO_200M_050219_1,16268 HBL1_DMSO_200M_050219_1,16268, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16269 79.064 729.0 205740.0 25 0 24409.0 -1 YYLPMVEEDEH 11 171 720.8024794655599 0 720.8036376833916 PEAK CID FTMS 0 0 0 16252 148824.625 1.0 0 0.0 17 Oxidation (M) _YYLPM(Oxidation (M))VEEDEH_ ENSG00000163554|ENST00000643759|SPTA1;nc|ENSG00000163554|P02549-2|SPTA1 13.90604991867851 0.4141907700618076 3 YYD[EC]V{I|L}E 8 -1 33.621 0.0 0.0 2.3354 0.0 0.0 163.07145019505705 259.1091707818969 422.180620976954 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 YYD[EC]V{I|L}E 2.3354 - 635 + 1 1.521 106745.8 1.0 10621 5646 16252 HBL1_DMSO_200M_050219_1,16269 HBL1_DMSO_200M_050219_1,16269,YYLPMVEEDEH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16270 79.068 222.0 344060.0 25 0 46281.0 -1 0 92 981.970975401102 1961.927397869004 2 982.4802734255792 MULTI CID FTMS 0 0 0 16252 173217.84375 0.1419438662464375 -4 0.3671722412109375 18 3 {I|L}{I|L}M{[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 7 -1 21.609 0.0 0.0 1.1014 0.0 0.0 1156.5221377145103 0.0 1156.5221377145103 0.0 5.402407661036044 0.0 0.0 0 0.0 0.0 1.0138793319624575 0.0 {I|L}{I|L}M{[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.1014 - 1378 + 1 1.521 55449.5 1.0 10622 5646 16252 HBL1_DMSO_200M_050219_1,16270 HBL1_DMSO_200M_050219_1,16270, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16271 79.082 800.0 208590.0 25 0 38057.0 30900 RIRRSGPWKEI 11 177 699.4082853715669 1396.8020178099337 2 699.4089233279228 MULTI CID FTMS 0 0 0 16252 103920.4296875 0.1801904540158186 -10 0.8774642944335938 19 Unmodified _RIRRSGPWKEI_ nc|ENSG00000165192|Q8WXH4-3|ASB11 2.498486711656943 0.8633599123570009 3 {I|L} 1 10 11.259 0.0 0.0 0.80606 0.0 0.0 1265.7073960831742 0.0 1265.7073960831742 0.0 1.6717723624710867 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.80606 + + 836 + 1 1.521 126017.4 0.9900000095367432 10623 5646 16252 HBL1_DMSO_200M_050219_1,16271 HBL1_DMSO_200M_050219_1,16271,RIRRSGPWKEI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16272 79.091 437.0 270720.0 25 0 38421.0 14418 IFLIAGAF 8 137 426.255147998889 850.495743064578 2 426.2553893923759 MULTI CID FTMS 0 0 0 16252 106759.21875 0.5188742039951838 -1 0.1282577514648437 20 Unmodified _IFLIAGAF_ ENSG00000138613|ENST00000261879|APH1B;nc|ENSG00000138613|Q8WW43-2|APH1B 17.086550045450526 0.6584923310065985 3 SP{I|L}{[QN]|[E{I|L}]|[KN]} 5 6 19.041 0.0 0.0 2.2388 0.0 0.0 293.1744557111344 0.0 293.1744557111344 0.0 3.3353614059068803 0.0 0.0 0 0.4247425010840047 0.0 0.2742275032520141 0.0 SP{I|L}{[QN]|[E{I|L}]|[KN]} 2.2388 - 206 1 1.521 95750.7 1.0 10624 5646 16252 HBL1_DMSO_200M_050219_1,16272 HBL1_DMSO_200M_050219_1,16272,IFLIAGAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16274 79.095 6.9 12910000.0 25 0 1063200.0 + 13621 HPPSHWPLI 9 101 542.2903820269429 1082.5662111206857 2 542.2909423708916 MULTI CID FTMS 0 0 0 16273 12113900.0 1.0 0 0.0 1 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 85.35673624503755 0.0162188719545379 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L} 9 2 + 56.098 0.0 0.0 5.1819 5.1819 74.709 0.0 0.0 0.0 0.944825567400315 23.12182729135785 0.944825567400315 1.0391719390811716 0 1.7658715643802765 0.0 1.035666875892183 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWHP{I|L}{I|L};HPPSHWP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWPH{I|L}{I|L};HPPSHW{I|L}P{I|L};[{I|L}P]WSEEP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L};[{I|L}P]C{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EH{I|L}{I|L} 5.1819;5.0859;4.5784;4.3849;4.2765;3.9943;3.723;3.6779;3.645;3.3185 -;-;+;-;-;-;-;-;-;- + 891 1 1.507 72694.1 1.0 10625 5647 16273 HBL1_DMSO_200M_050219_1,16274 HBL1_DMSO_200M_050219_1,16274,HPPSHWPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16275 79.096 8.9 6938600.0 25 0 1178500.0 + + 12377 DAFPNIDKI 9 72 516.3136621918686 1030.6127714505371 2 516.3146240115166 MULTI CID FTMS 0 0 0 16273 6933368.5 0.9825172801121538 -1 0.114898681640625 2 Unmodified _GTGKVQKKVS_ nc|ENSG00000107362|Q5VST6-2|ABHD17B;ENSG00000107362|ENST00000333421|ABHD17B 3.2813086475875832 0.7114585191678878 3 [NP]{I|L}DK 5 -1 14.437 0.0 0.0 1.4008 0.0 0.0 0.0 460.287865040182 460.287865040182 3.4678748622465605 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}DK 1.4008 - 24 1 1.507 51106.6 1.0 10626 5647 16273 HBL1_DMSO_200M_050219_1,16275 HBL1_DMSO_200M_050219_1,16275,GTGKVQKKVS False False DAFPNIDKI 79.096394 516.314624011517 30028304.0 16273.0 nc|ENSG00000107362|Q5VST6-2|ABHD17B;;ENSG00000107362|ENST00000333421|ABHD17B 3.2584760586420694 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16276 79.098 7.7 2361100.0 25 0 286780.0 + 5030 DGWTPLHV 8 45 462.7321557219596 923.4497585107192 2 462.7326843142509 MULTI CID FTMS 0 0 0 16273 11808894.0 0.9707241310259994 -1 0.114898681640625 3 Unmodified _DGWTPLHV_ ENSG00000183475|ENST00000332783|ASB7;nc|ENSG00000183475|Q9H672-2|ASB7 9.347437153973935 0.7675937258251505 3 T 1 7 11.99 0.0 0.0 1.2984 0.0 0.0 358.1256604917099 461.2520697945224 819.3777302862322 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + T 1.2984 + + 8 + 1 1.507 20003.0 1.0 10627 5647 16273 HBL1_DMSO_200M_050219_1,16276 HBL1_DMSO_200M_050219_1,16276,DGWTPLHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16277 79.099 21.0 2005400.0 25 0 360440.0 19435 LEYLKKVR 8 67 524.8272781963168 1047.6400034594335 2 524.8278686404228 MULTI CID FTMS 0 0 0 16273 7225506.0 1.0 0 0.0 4 Unmodified _LEYLKKVR_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 0.6903765706972694 0.8201419426409876 3 V 1 7 9.7539 0.0 0.0 0.93104 0.0 0.0 930.5606405217368 0.0 930.5606405217368 0.0 9.75390988664909 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.93104 + + 3 + 1 1.507 38664.9 1.0 10628 5647 16273 HBL1_DMSO_200M_050219_1,16277 HBL1_DMSO_200M_050219_1,16277,LEYLKKVR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16278 79.1 25.0 1632400.0 25 0 195860.0 + 16190 IVHTAKAKVV 10 66 533.3409968318289 0 533.3411132693291 PEAK CID FTMS 0 0 0 16273 6852051.5 1.0 0 0.0 5 Unmodified _IVHTAKAKVV_ REV__ENSG00000122203|ENST00000298569|KIAA1191;REV__nc|ENSG00000122203|Q96A73-2|KIAA1191 4.3292370932331545 0.3961065659209837 3 {I|L}{I|L}T 3 -1 14.693 0.0 0.0 1.38 0.0 0.0 215.1601462671649 519.2639864557249 734.4241327228897 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}T 1.38 - 15 + 1 1.507 43031.3 1.0 10629 5647 16273 HBL1_DMSO_200M_050219_1,16278 HBL1_DMSO_200M_050219_1,16278,IVHTAKAKVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16279 79.101 13.0 3778400.0 25 0 418610.0 + 3113 AVPEIMDRI 9 61 522.280679673034 1042.546806412868 2 522.2818481326103 MULTI CID FTMS 0 0 0 16273 4816707.5 1.0 0 0.0 6 Unmodified _AVPEIMDRI_ ENSG00000068366|ENST00000672401|ACSL4;ENSG00000123983|ENST00000357430|ACSL3;nc|ENSG00000068366|O60488|ACSL4 24.99096001346401 0.2132109383330889 3 {[VA]|[{I|L}G]}PE{I|L}MD[R{I|L}] 9 0 + 68.874 0.0 0.0 6.6063 6.6063 82.623 0.0 0.0 0.0 39.20818753952375 10.642492736872596 10.642492736872596 3.0102999566398125 0 0.3494850021680094 2.0 0.0 0.3494850021680094 + + {[VA]|[{I|L}G]}PE{I|L}MD[R{I|L}];{[VA]|[{I|L}G]}P{I|L}EMD[R{I|L}];{[VA]|[{I|L}G]}{I|L}PEMD[R{I|L}];{[VA]|[{I|L}G]}PE{I|L}M{[RE]|[WV]}V;{[VA]|[{I|L}G]}P{I|L}EM{[RE]|[WV]}V;{[VA]|[{I|L}G]}{I|L}PEM{[RE]|[WV]}V 6.6063;6.3176;6.0288;5.4605;5.1717;4.883 +;-;-;-;-;- + 99 + 1 1.507 47514.6 1.0 10630 5647 16273 HBL1_DMSO_200M_050219_1,16279 HBL1_DMSO_200M_050219_1,16279,AVPEIMDRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16280 79.102 18.0 2522600.0 25 0 234030.0 + 19474 LFHEVVQAF 9 78 545.2902961970983 1088.5660394609963 2 545.2907592654228 MULTI CID FTMS 0 0 0 16273 2453470.5 1.0 0 0.0 7 Unmodified _LFHEVVQAF_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000487214.1_1_1:889839-894659:-|nuORF 24.020572477871973 0.2255576514309169 3 {[YC]|[HE]}{M(Oxidation (M))|F}{I|L}VVQA{M(Oxidation (M))|F} 9 4 + 55.073 0.0 0.0 5.0592 5.0592 79.984 0.0 0.0 0.0 3.9266750356873104 41.36168767277148 3.9266750356873104 4.771212547196626 0 1.0 0.0 0.25 0.0 {[YC]|[HE]}{M(Oxidation (M))|F}{I|L}VVQA{M(Oxidation (M))|F};{[YC]|[HE]}{M(Oxidation (M))|F}V{I|L}VQA{M(Oxidation (M))|F};{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}VV[AG]A{M(Oxidation (M))|F};[HV]QVV{I|L}[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}H]|[RQ]}VVQA{M(Oxidation (M))|F};{[YC]|[HE]}{M(Oxidation (M))|F}V{I|L}V[AG]A{M(Oxidation (M))|F};[HV]QV{I|L}V[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F};[HV][AG]VV{I|L}[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}H]|[RQ]}VV[AG]A{M(Oxidation (M))|F};[HV][AG]V{I|L}V[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F} 5.0592;4.6209;4.2133;4.2132;3.9367;3.775;3.7749;3.3673;3.0908;2.929 -;-;-;-;-;-;-;-;-;- 175 1 1.507 46387.2 1.0 10631 5647 16273 HBL1_DMSO_200M_050219_1,16280 HBL1_DMSO_200M_050219_1,16280,LFHEVVQAF False True LFHEVVQAF 79.102288 545.290759265423 50219628.0 16273.0 ENSG00000188976|ENST00000327044|NOC2L;;ENST00000487214.1_1_1:889839-894659:-|nuORF 6.715248425801595 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16281 79.103 41.0 1760200.0 25 0 217690.0 + 3364 AYPYYASAF 9 89 526.7393609087195 1051.464168884239 2 526.7405883669853 MULTI CID FTMS 0 0 0 16273 2371720.5 1.0 0 0.0 8 Unmodified _AYPYYASAF_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 20.871210003555333 0.2717241269066626 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AYSA 6 4 49.13 0.0 0.0 4.6725 0.0 0.0 0.0 396.15420729660144 396.15420729660144 21.505149978319903 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AYSA 4.6725 - 552 1 1.507 61744.6 1.0 10632 5647 16273 HBL1_DMSO_200M_050219_1,16281 HBL1_DMSO_200M_050219_1,16281,AYPYYASAF False True AYPYYASAF 79.103465 526.7408 20270372.0 16273.0 ENSG00000244038|ENST00000602624|DDOST;;nc|ENSG00000244038|P39656|DDOST;;nc|ENSG00000244038|P39656-3|DDOST;;nc|ENSG00000244038|P39656-2|DDOST 3.239160815874736 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16282 79.105 30.0 1729100.0 25 0 210760.0 + 35955 SVPNKDVFQEL 11 78 638.3325191712581 1274.6504854093162 2 638.3332397341728 MULTI CID FTMS 0 0 0 16273 2148499.25 0.5898004430024655 6 -0.4836959838867187 9 Unmodified _SVPNKDVFQEL_ ENSG00000115919|ENST00000264170|KYNU 37.07464296494664 0.257459615863268 3 [VS]PYQ{M(Oxidation (M))|F}VDK 9 7 70.724 0.0 0.0 5.5485 0.0 0.0 0.0 208.07312952213127 208.07312952213127 49.781381439366186 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [VS]PYQ{M(Oxidation (M))|F}VDK 5.5485 - 666 + 1 1.507 44640.1 1.0 10633 5647 16273 HBL1_DMSO_200M_050219_1,16282 HBL1_DMSO_200M_050219_1,16282,SVPNKDVFQEL False True SVPNKDVFQEL 79.104644 638.333239734173 254057680.0 16273.0 ENSG00000115919|ENST00000264170|KYNU 5.17229159673055 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16283 79.108 168.0 206740.0 25 0 14951.0 40053 VGGLSRERLVR 11 70 621.3745873979608 1240.7346218627215 2 621.3752929568291 MULTI CID FTMS 0 0 0 16273 1837334.75 1.0 0 0.0 10 Unmodified _VGGLSRERLVR_ ENSG00000215045|ENST00000457091|GRID2IP 2.9952420565917617 0.861016188266951 3 A 1 11 4.6041 0.0 0.0 0.37108 0.0 0.0 620.412918837134 546.2690523736936 1166.6819712108277 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.37108 - 26 + 1 1.507 34166.1 1.0 10634 5647 16273 HBL1_DMSO_200M_050219_1,16283 HBL1_DMSO_200M_050219_1,16283,VGGLSRERLVR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16284 79.111 181.0 198670.0 25 0 12813.0 -1 QAYNSQFMNQP 11 82 672.2869798837836 0 672.4091064333916 PEAK CID FTMS 0 0 0 16273 30930.7421875 0.5558908946519475 1 -0.0479812622070312 11 Oxidation (M) _QAYNSQFM(Oxidation (M))NQP_ ENSG00000108175|ENST00000334512|ZMIZ1;ENST00000478357.1_1_10:81036939-81053539:+|nuORF;nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1 2.9952420565917617 0.4761840153648598 3 V{I|L} 2 -1 7.9588 0.0 0.0 0.59281 0.0 0.0 916.2737755861234 211.10862146549064 1127.382397051614 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L} 0.59281 - 16 + 1 1.507 33855.4 1.0 10635 5647 16273 HBL1_DMSO_200M_050219_1,16284 HBL1_DMSO_200M_050219_1,16284,QAYNSQFMNQP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16285 79.115 182.0 345640.0 25 0 35926.0 34137 SLLTKVWNQIK 11 107 665.4009200073922 1328.7872870815845 2 665.4015991091728 MULTI CID FTMS 0 0 0 16273 1661952.875 1.0 0 0.0 12 Unmodified _SLLTKVWNQIK_ ENSG00000068097|ENST00000184956|HEATR6 8.155526934196011 0.8366696279279818 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S 4 9 20.423 0.0 0.0 1.537 0.0 0.0 0.0 891.548675591603 891.548675591603 9.454321750294673 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3054621874040891 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S 1.537 - 184 1 1.507 56992.8 1.0 10636 5647 16273 HBL1_DMSO_200M_050219_1,16285 HBL1_DMSO_200M_050219_1,16285,SLLTKVWNQIK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16286 79.117 110.0 1157500.0 25 0 213540.0 + 21203 LPDGQVITI 9 130 478.2763719933386 954.5381910534774 2 478.2772704958916 MULTI CID FTMS 0 0 0 16273 1618702.875 1.0 0 0.0 13 Unmodified _LPDGQVITI_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 53.832793166522166 0.0319663582346103 3 [DP]GQV{I|L}T{I|L}{I|L} 9 2 + 63.083 0.0 0.0 6.6087 6.6087 83.638 0.0 0.0 0.0 3.5654732351381213 15.968878562567532 3.5654732351381213 3.5654732351381213 0 0.9476212463643424 0.0 0.5866968715561641 0.6549471895720985 [DP]GQV{I|L}T{I|L}{I|L};{[QG]|[NA]}DPV{I|L}T{I|L}{I|L};[DP]GQV{I|L}{I|L}T{I|L};[DP]GQ{I|L}VT{I|L}{I|L};{[QG]|[NA]}DPV{I|L}{I|L}T{I|L};[{I|L}P]D[NG]{I|L}T{I|L}{I|L};{[VA]|[{I|L}G]}N[DP]{I|L}T{I|L}{I|L};{[QG]|[NA]}DP{I|L}VT{I|L}{I|L};[DP]GQ{I|L}V{I|L}T{I|L};[{I|L}P]D[NG]{I|L}{I|L}T{I|L} 6.6087;6.2352;6.2279;6.0061;5.8544;5.8376;5.6939;5.6325;5.6252;5.4568 -;-;-;-;-;-;-;-;-;- 1196 1 1.507 99638.9 1.0 10637 5647 16273 HBL1_DMSO_200M_050219_1,16286 HBL1_DMSO_200M_050219_1,16286,LPDGQVITI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16287 79.119 55.0 1683300.0 25 0 468290.0 -1 0 75 574.3601292170174 573.3528527504174 1 574.3802978396416 MULTI CID FTMS 0 0 0 16273 904837.5625 0.80019142821232 -1 0.114898681640625 14 3 {M(Oxidation (M))|F}VP{I|L}V 5 -1 + 43.633 0.0 0.0 7.6101 7.6101 84.896 0.0 0.0 0.0 2.914478256039672 2.914478256039672 2.914478256039672 2.914478256039672 0 1.1237125054200234 0.0 0.0 0.0 {M(Oxidation (M))|F}VP{I|L}V;[{I|L}P]V{M(Oxidation (M))|F}V;{M(Oxidation (M))|F}VPV{I|L};[{M(Oxidation (M))|F}V]P{I|L}V;{M(Oxidation (M))|F}VVP{I|L};{[TV]|[{I|L}S]}[KQ]V 7.6101;7.1018;6.3065;4.9317;4.455;3.0885 -;-;-;-;-;- 49 + 1 1.507 73293.7 1.0 10638 5647 16273 HBL1_DMSO_200M_050219_1,16287 HBL1_DMSO_200M_050219_1,16287, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16288 79.12 56.0 2383000.0 25 0 453340.0 + 13668 HPYRLILTV 9 109 556.3345340563499 1110.6545151794996 2 556.3350707888603 MULTI CID FTMS 0 0 0 16273 1515886.125 0.0794399401514482 -4 0.3981246948242187 15 Unmodified _HPYRLILTV_ ENSG00000105397|ENST00000525621|TYK2 60.07390631473393 0.0260411565414776 3 PV[VP]{I|L}H{I|L}TV 9 5 49.319 0.0 0.0 4.4406 0.0 0.0 137.05931288886876 0.0 137.05931288886876 0.0 28.350162448297667 0.0 0.0 0 1.805462187404089 0.0 0.3807196863200844 0.0 PV[VP]{I|L}H{I|L}TV 4.4406 - 430 1 1.507 106106.1 1.0 10639 5647 16273 HBL1_DMSO_200M_050219_1,16288 HBL1_DMSO_200M_050219_1,16288,HPYRLILTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16289 79.122 51.0 1677600.0 25 0 108990.0 26941 PDYDPTIEDSY 11 99 657.7719951080023 1313.5294372828046 2 657.7731201052666 MULTI CID FTMS 0 0 0 16273 1357573.0 0.666990030939058 2 -0.1046295166015625 16 Unmodified _PDYDPTIEDSY_ ENSG00000158186|ENST00000423968|MRAS 9.38312468134398 0.8308777417566128 3 SY 2 9 27.206 0.0 0.0 2.0712 0.0 0.0 1045.4234629157434 0.0 1045.4234629157434 0.0 -1.643081549561522 -1.643081549561522 0.0 0 0.5 0.0 0.2742275032520141 0.0 + SY 2.0712 + + 518 + 1 1.507 69346.4 1.0 10640 5647 16273 HBL1_DMSO_200M_050219_1,16289 HBL1_DMSO_200M_050219_1,16289,PDYDPTIEDSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16290 79.123 55.0 1005600.0 25 0 123100.0 + 42850 VVLGEFGVRNV 11 64 594.8403079034211 1187.6660628736422 2 594.8408691287041 MULTI CID FTMS 0 0 0 16273 1083347.75 0.2126051351110549 4 -0.2993316650390625 17 Unmodified _VVLGEFGVRNV_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 43.9818466556824 0.1510575460884947 3 VV{I|L}GE{M(Oxidation (M))|F}R 7 4 85.521 0.0 0.0 7.2008 0.0 0.0 0.0 384.2001436822876 384.2001436822876 68.5661470985147 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.0 0.3494850021680094 VV{I|L}GE{M(Oxidation (M))|F}R 7.2008 - 180 + 1 1.507 48810.5 1.0 10641 5647 16273 HBL1_DMSO_200M_050219_1,16290 HBL1_DMSO_200M_050219_1,16290,VVLGEFGVRNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16291 79.125 115.0 444290.0 25 0 37420.0 45887 YYRRPLQVL 9 91 604.3483448405694 1206.6821367479388 2 604.3491088747978 MULTI CID FTMS 0 0 0 16273 927553.4375 0.4062543969577569 6 -0.4836959838867187 18 Unmodified _YYRRPLQVL_ ENSG00000101441|ENST00000217423|CST4 2.302733041254933 0.8342969208511092 3 PY 2 8 10.969 0.0 0.0 0.90903 0.0 0.0 131.15498938641375 812.39245974156 943.5474491279738 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PY 0.90903 - 47 + 1 1.507 40216.6 1.0 10642 5647 16273 HBL1_DMSO_200M_050219_1,16291 HBL1_DMSO_200M_050219_1,16291,YYRRPLQVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16292 79.131 338.0 639770.0 25 0 60061.0 + 20415 LLIDDKGTIKL 11 135 614.8777221121956 1227.740891291191 2 614.8796264529228 MULTI CID FTMS 0 0 0 16273 702165.4375 1.0 0 0.0 19 Unmodified _LLIDDKGTIKL_ ENSG00000170312|ENST00000395284|CDK1 99.86412980059998 0.0003245471953264 3 {I|L}{I|L}{I|L}DDKGT{I|L}{I|L}K 11 2 + 104.68 0.0 0.0 8.526 8.526 85.295 0.0 0.0 0.0 23.63933349584073 2.0289375146765 2.0289375146765 2.0289375146765 0 3.195046257204389 2.0 0.8494850021680094 0.2742275032520141 {I|L}{I|L}{I|L}DDKGT{I|L}{I|L}K;{I|L}{I|L}{I|L}DDKGT{I|L}K{I|L};{I|L}{I|L}{I|L}DDKRRS{I|L};{I|L}{I|L}{I|L}DDKRRTV;{I|L}{I|L}{I|L}D[C(Carbamidomethyl (C))K]{I|L}{I|L}{I|L}K;{I|L}{I|L}D{I|L}DKGT{I|L}{I|L}K;{I|L}{I|L}{I|L}HHE{I|L}{I|L}{I|L}K;{I|L}{I|L}D{I|L}[C(Carbamidomethyl (C))K]{I|L}{I|L}{I|L}K;{I|L}{I|L}{I|L}[YR][Y{M(Oxidation (M))|F}]{I|L}K;{I|L}{I|L}{I|L}D{[WN]|[YH]}T{I|L}{I|L}K 8.526;8.3607;6.9597;6.5458;6.1741;5.8936;5.583;5.4672;5.2284;5.1539 -;+;-;-;-;-;-;-;-;- + 4351 + 1 1.507 162320.8 1.0 10643 5647 16273 HBL1_DMSO_200M_050219_1,16292 HBL1_DMSO_200M_050219_1,16292,LLIDDKGTIKL True True LLIDDKGTIKL 79.131488 614.879626452923 5107069.5 16273.0 ENSG00000170312|ENST00000395284|CDK1 5.720063845316569 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16293 79.139 417.0 324910.0 25 0 40058.0 21166 LPAYPASL 8 179 416.2340420304462 830.4535311276924 2 416.2341491580009 MULTI CID FTMS 0 0 0 16273 669009.75 1.0 0 0.0 20 Unmodified _LPAYPASL_ ENSG00000132692|ENST00000329117|BCAN;nc|ENSG00000132692|Q96GW7-2|BCAN 45.7499826716795 0.1592378023510922 3 {[TV]|[{I|L}S]}MPAS{I|L}{I|L} 8 4 + 60.421 0.0 0.0 7.2757 7.2757 82.441 0.0 0.0 0.0 14.648867983026506 35.984105271693124 14.648867983026506 1.7609125905568137 0 0.4247425010840047 1.3979400086720375 1.1382104921644451 0.0 {[TV]|[{I|L}S]}MPAS{I|L}{I|L};{[TV]|[{I|L}S]}MPA{I|L}S{I|L};{[TV]|[{I|L}S]}MAPS{I|L}{I|L};{[TV]|[{I|L}S]}[NG]GAS{I|L}{I|L};{[TV]|[{I|L}S]}MAP{I|L}S{I|L};{[TV]|[{I|L}S]}MP{I|L}AS{I|L};{[TV]|[{I|L}S]}[NG]QS{I|L}{I|L};{[TV]|[{I|L}S]}[NG]GA{I|L}S{I|L};{[TV]|[{I|L}S]}[NG]Q{I|L}S{I|L};{[TV]|[{I|L}S]}[NG]G{I|L}AS{I|L} 7.2757;7.0636;6.7011;6.5362;6.4891;6.3387;6.3306;6.3241;6.1186;5.5992 -;-;-;-;-;-;-;-;-;- 801 1 1.507 106898.9 1.0 10644 5647 16273 HBL1_DMSO_200M_050219_1,16293 HBL1_DMSO_200M_050219_1,16293,LPAYPASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16295 79.143 13.0 4080700.0 25 0 542560.0 + 12840 GVVDPRAISVL 11 71 563.3352635352793 1124.6559741373585 2 563.3354369997978 MULTI CID FTMS 0 0 0 16294 4582790.0 0.8541711341230351 1 -0.0566482543945312 1 Unmodified _GVVDPRAISVL_ ENSG00000244687|ENST00000371674|UBE2V1;ENST00000483534.5_1_20:48699307-48713022:-|nuORF;nc|ENSG00000244687|Q13404-1|UBE2V1;nc|ENSG00000244687|Q13404-2|UBE2V1;nc|ENSG00000244687|Q13404-6|UBE2V1;nc|ENSG00000244687|Q13404-7|UBE2V1 40.72490554402381 0.2012291192650359 3 [{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDVGV{I|L} 11 8 + 67.745 0.0 0.0 6.0236 6.0236 76.786 0.0 0.0 0.0 10.713115950330632 30.833367094787548 10.713115950330632 0.5551732784983159 0 0.805462187404089 1.0969100130080565 1.2302046884880935 0.0 [{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDVGV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDRV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SDVVGV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SDVRV{I|L};[{I|L}P][KA]DVDVGV{I|L};[{I|L}P][KA]DVDRV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVRDV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SV[PS]SV{I|L};[{I|L}P][KA]DDVVGV{I|L};[{I|L}P][WK]VDVGV{I|L} 6.0236;5.9742;5.5993;5.55;5.4883;5.4389;5.2819;5.0885;5.064;5.0612 -;-;-;-;-;-;-;-;-;- 366 1 1.507 47696.5 1.0 10645 5648 16294 HBL1_DMSO_200M_050219_1,16295 HBL1_DMSO_200M_050219_1,16295,GVVDPRAISVL False True GVVDPRAISVL 79.143198 563.335436999798 115484484.0 16294.0 nc|ENSG00000244687|Q13404-7|UBE2V1;;ENST00000483534.5_1_20:48699307-48713022:-|nuORF;;nc|ENSG00000244687|Q13404-2|UBE2V1;;nc|ENSG00000244687|Q13404-6|UBE2V1;;ENSG00000244687|ENST00000371674|UBE2V1;;nc|ENSG00000244687|Q13404-1|UBE2V1 8.374405066172281 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16296 79.144 15.0 3575500.0 25 0 282630.0 + -1 MRYYCIADI 9 59 610.7751342785782 1219.5357156239563 2 610.7763549685478 MULTI CID FTMS 0 0 0 16294 2844735.5 0.6066453784358353 1 -0.0566482543945312 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))RYYC(Carbamidomethyl (C))IADI_ REV__ENSG00000116218|ENST00000367615|NPHS2 7.289230182591677 0.6602208344931196 3 {I|L}Y 2 -1 16.766 0.0 0.0 1.3748 0.0 0.0 353.1049782658809 587.2589399396836 940.3639182055643 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {I|L}Y 1.3748 - 42 + 1 1.507 46936.9 1.0 10646 5648 16294 HBL1_DMSO_200M_050219_1,16296 HBL1_DMSO_200M_050219_1,16296,MRYYCIADI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16297 79.146 20.0 2802900.0 25 0 441970.0 + -1 MYRDYAMAAL 10 78 407.5190566783977 1219.5353406353931 3 407.5195190310478 MULTI CID FTMS 0 0 0 16294 2435408.25 0.6854427017057274 1 -0.0566482543945312 3 Oxidation (M) _M(Oxidation (M))YRDYAMAAL_ REV__ENSG00000197849|ENST00000641972|OR8G1 6.1918466704503565 0.6979955778746556 3 {[{M(Oxidation (M))|F}C]|[YS]}C{I|L}YYV[Y{M(Oxidation (M))|F}] 9 -1 {[{M(Oxidation (M))|F}C]|[YS]}C{I|L} + + 20.445 14.654 3.1432 1.6765 1.6765 48.629 0.0 0.0 0.0 0.0 5.791812460476244 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[{M(Oxidation (M))|F}C]|[YS]}C{I|L}YYV[Y{M(Oxidation (M))|F}] 1.6765 - 258 + 1 1.507 53554.6 1.0 10647 5648 16294 HBL1_DMSO_200M_050219_1,16297 HBL1_DMSO_200M_050219_1,16297,MYRDYAMAAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16298 79.147 25.0 1757000.0 25 0 135160.0 + 25109 MPYPAPNVPVV 11 77 592.312484973917 1182.610417014634 2 592.3123657107353 MULTI CID FTMS 0 0 0 16294 1946562.625 0.8282091887416955 1 -0.0566482543945312 4 Unmodified _MPYPAPNVPVV_ ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB 37.97399986684836 0.2436054658898253 3 [VP]N[PA][YE]V 8 7 38.645 0.0 0.0 3.2678 0.0 0.0 0.0 310.17695299821884 310.17695299821884 12.614393726401689 0.0 0.0 0.0 0 0.75 1.6989700043360187 0.0 0.75 [VP]N[PA][YE]V 3.2678 - 306 1 1.507 41673.9 1.0 10648 5648 16294 HBL1_DMSO_200M_050219_1,16298 HBL1_DMSO_200M_050219_1,16298,MPYPAPNVPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16299 79.148 27.0 2056100.0 25 0 454580.0 + 3715 DAFPSIDKI 9 71 503.2652076776927 1004.5158624221854 2 503.2664672732353 MULTI CID FTMS 0 0 0 16294 1899560.75 0.6709928336406926 -6 0.5300521850585938 5 Unmodified _DAFPSIDKI_ ENSG00000136379|ENST00000258884|ABHD17C 24.99096001346401 0.2132109383330889 3 {[DA]|[EG]}{M(Oxidation (M))|F}PS{I|L}DK{I|L} 9 0 {[DA]|[EG]}{M(Oxidation (M))|F} + + 30.451 21.427 6.4319 3.0314 3.0314 50.261 0.0 0.0 0.0 0.0 2.7557626122369 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}PS{I|L}DK{I|L} 3.0314 + + 84 + 1 1.507 49376.0 1.0 10649 5648 16294 HBL1_DMSO_200M_050219_1,16299 HBL1_DMSO_200M_050219_1,16299,DAFPSIDKI False True DAFPSIDKI 79.147913 503.266467273235 29146730.0 16294.0 ENSG00000136379|ENST00000258884|ABHD17C 5.584229866663615 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16300 79.149 39.0 856030.0 25 0 210080.0 42915 VVQKVQYIYGL 11 55 655.3817727593439 1308.7489925854877 2 655.3827392458916 MULTI CID FTMS 0 0 0 16294 1770998.375 0.5494624896103094 -3 0.2911376953125 6 Unmodified _VVQKVQYIYGL_ ENST00000324366.12_2_14:23390027-23390099:-|nuORF 1.3295316138638542 0.8688751186870782 3 W 1 11 3.9794 0.0 0.0 0.30406 0.0 0.0 600.4050727630253 519.2573336236936 1119.6624063867189 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.30406 - 1 + 1 1.507 41047.0 1.0 10650 5648 16294 HBL1_DMSO_200M_050219_1,16300 HBL1_DMSO_200M_050219_1,16300,VVQKVQYIYGL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16301 79.15 46.0 1107700.0 25 0 226210.0 + 36129 SVTDLAFKV 9 77 490.2754511650902 978.5363493969804 2 490.2773315310478 MULTI CID FTMS 0 0 0 16294 957113.3125 0.6693110033467707 1 -0.0566482543945312 7 Unmodified _SVTDLAFKV_ ENSG00000061273|ENST00000080059|HDAC7;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7 34.40172386719151 0.1061884637610825 3 [VS]TD{I|L}A{M(Oxidation (M))|F}KV 9 0 + 68.18 0.0 0.0 6.9675 6.9675 93.796 0.0 0.0 0.0 32.50055140445741 11.271211393095244 11.271211393095244 22.218487496163554 0 0.4247425010840047 2.0 0.0 0.2742275032520141 + + [VS]TD{I|L}A{M(Oxidation (M))|F}KV;[VS]T[W{I|L}]{M(Oxidation (M))|F}KV;[VS]T{[VA]|[{I|L}G]}E{M(Oxidation (M))|F}KV;[VS]T{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.9675;4.6969;4.6447;2.8268 +;-;-;- + 151 + 1 1.507 43817.2 1.0 10651 5648 16294 HBL1_DMSO_200M_050219_1,16301 HBL1_DMSO_200M_050219_1,16301,SVTDLAFKV True True SVTDLAFKV 79.150335 490.277331531048 20704788.0 16294.0 nc|ENSG00000061273|Q8WUI4-3|HDAC7;;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;;nc|ENSG00000061273|Q8WUI4-2|HDAC7;;nc|ENSG00000061273|Q8WUI4|HDAC7;;nc|ENSG00000061273|Q8WUI4-6|HDAC7;;nc|ENSG00000061273|Q8WUI4-10|HDAC7;;nc|ENSG00000061273|Q8WUI4-7|HDAC7;;nc|ENSG00000061273|Q8WUI4-9|HDAC7;;ENSG00000061273|ENST00000080059|HDAC7;;nc|ENSG00000061273|Q8WUI4-4|HDAC7;;nc|ENSG00000061273|Q8WUI4-8|HDAC7 7.740315596262614 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16302 79.152 63.0 813510.0 25 0 81180.0 19292 LEKSERILST 10 88 588.3355207439473 1174.6564885546943 2 588.3360473513603 MULTI CID FTMS 0 0 0 16294 682654.6875 0.2896697420571566 7 -0.6117401123046875 8 Unmodified _LEKSERILST_ ENST00000397149.3_1_9:33057678-33060557:-|nuORF 5.296884461304476 0.7021353017287152 3 YSC 3 9 12.92 0.0 0.0 1.0999 0.0 0.0 164.20435340020077 654.3388765924436 818.5432299926445 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YSC 1.0999 - 73 + 1 1.507 43478.8 1.0 10652 5648 16294 HBL1_DMSO_200M_050219_1,16302 HBL1_DMSO_200M_050219_1,16302,LEKSERILST False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16303 79.153 38.0 1263000.0 25 0 131060.0 + 10812 FYVDTVRAF 9 74 559.2874112922002 1116.5602696512003 2 559.2877075076103 MULTI CID FTMS 0 0 0 16294 710172.9375 0.9559377122678692 1 -0.0566482543945312 9 Unmodified _FYVDTVRAF_ ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133235217-133253139:-|nuORF 21.53697664764585 0.2571576504437394 3 D[YK]TDVYE 8 7 46.547 0.0 0.0 4.1688 0.0 0.0 85.08981520820468 0.0 85.08981520820468 0.0 22.282606707200188 0.0 0.0 0 0.4247425010840047 0.0 0.6549471895720985 0.0 D[YK]TDVYE 4.1688 - 91 1 1.507 39569.4 1.0 10653 5648 16294 HBL1_DMSO_200M_050219_1,16303 HBL1_DMSO_200M_050219_1,16303,FYVDTVRAF False True FYVDTVRAF 79.153071 559.28770750761 8908573.0 16294.0 ENSG00000177084|ENST00000320574|POLE;;ENST00000537064.5_1_12:133235217-133253139:-|nuORF 4.157759189605713 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16304 79.155 81.0 429770.0 25 0 100570.0 + 45945 YYYDPTTGLYY 11 63 709.811092827262 1417.607632721324 2 709.8115722537041 MULTI CID FTMS 0 0 0 16294 660602.0 0.3595848973439529 1 -0.0566482543945312 10 Unmodified _YYYDPTTGLYY_ ENSG00000003756|ENST00000347869|RBM5;ENST00000489437.1_1_3:50144918-50148299:+|nuORF 13.90604991867851 0.7458848613461305 3 YY 2 9 21.454 0.0 0.0 1.5134 0.0 0.0 1073.4696161087074 0.0 1073.4696161087074 0.0 10.996075289514094 0.0 0.0 0 0.5 0.0 0.0 0.0 + YY 1.5134 + + 29 + 1 1.507 35452.8 1.0 10654 5648 16294 HBL1_DMSO_200M_050219_1,16304 HBL1_DMSO_200M_050219_1,16304,YYYDPTTGLYY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16305 79.158 147.0 773850.0 25 0 101740.0 + 21701 LPLRVPGL 8 97 432.7867198579895 863.5588867827789 2 432.7869445681572 MULTI CID FTMS 0 0 0 16294 602127.5 0.7368978214410828 1 -0.0566482543945312 11 Unmodified _LPLRVPGL_ REV__ENSG00000171714|ENST00000324559|ANO5 26.34127834903884 0.4900704351052977 3 {I|L}P{I|L} 3 -1 44.297 0.0 0.0 5.1296 0.0 0.0 0.0 537.3161104791624 537.3161104791624 30.31743128760553 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}P{I|L} 5.1296 + + 58 + 1 1.507 90682.4 1.0 10655 5648 16294 HBL1_DMSO_200M_050219_1,16305 HBL1_DMSO_200M_050219_1,16305,LPLRVPGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16306 79.16 93.0 464200.0 25 0 52827.0 + 21399 LPFYGPVLL 9 84 509.8014288962 1017.5883048592 2 509.8023559451103 MULTI CID FTMS 0 0 0 16294 505703.75 0.8634186266632092 -3 0.2911376953125 12 Unmodified _LPFYGPVLL_ REV__ENSG00000167850|ENST00000330793|CD300C 14.581692164780916 0.4419739649577144 3 {I|L}{I|L}M 3 -1 46.198 0.0 0.0 4.5399 0.0 0.0 0.0 657.3588024099539 657.3588024099539 27.15681882079493 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}M 4.5399 - 37 + 1 1.507 42307.4 1.0 10656 5648 16294 HBL1_DMSO_200M_050219_1,16306 HBL1_DMSO_200M_050219_1,16306,LPFYGPVLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16307 79.162 80.0 750420.0 25 0 102510.0 + 8562 ETLEDLKL 8 89 480.76652928136014 959.5185056295204 2 480.7666198611259 MULTI CID FTMS 0 0 0 16294 486627.0625 1.0 0 0.0 13 Unmodified _ETLEDLKL_ ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000561658.5_1_16:67486328-67515058:-|nuORF 37.97399986684836 0.2681860861828418 3 {[ET]|[MV]}{I|L}ED{I|L}K{I|L} 8 0 + 45.568 0.0 0.0 4.749 4.749 87.583 0.0 0.0 0.0 20.589645316547333 13.399480616943508 13.399480616943508 45.56775460319858 0 0.2215141619232908 0.0 0.4247425010840047 0.0 + + {[ET]|[MV]}{I|L}ED{I|L}K{I|L} 4.749 + + 115 + 1 1.507 51134.4 1.0 10657 5648 16294 HBL1_DMSO_200M_050219_1,16307 HBL1_DMSO_200M_050219_1,16307,ETLEDLKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16308 79.164 112.0 570970.0 25 0 37508.0 + -1 KDKAFEGPILLDMRI 15 92 437.25732389128825 1308.7501422740647 3 437.2587768435478 MULTI CID FTMS 0 0 0 16294 426500.71875 0.641790507855384 -7 0.61767578125 14 Carbamidomethyl (C) _EPLRPRLC(Carbamidomethyl (C))RL_ nc|ENSG00000188994|O60281-2|ZNF292 5.783430956126388 0.6998847395148697 3 [EP]{I|L}WH{I|L} 6 -1 32.638 0.0 0.0 2.4938 0.0 0.0 0.0 530.3363905519212 530.3363905519212 13.210371582098835 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 [EP]{I|L}WH{I|L} 2.4938 - 225 1 1.507 63149.3 1.0 10658 5648 16294 HBL1_DMSO_200M_050219_1,16308 HBL1_DMSO_200M_050219_1,16308,EPLRPRLCRL False False KDKAFEGPILLDMRI 79.164035 437.258776843548 530727.8125 16294.0 nc|ENSG00000188994|O60281-2|ZNF292 1.9210564891497293 4.0 False 15.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16309 79.168 206.0 184140.0 25 0 29150.0 37625 TLLLIFSIFWT 11 86 677.3950840275277 1352.7756151218553 2 677.3954955935478 MULTI CID FTMS 0 0 0 16294 368937.375 0.4412601641057795 7 -0.6117401123046875 15 Unmodified _TLLLIFSIFWT_ ENSG00000165188|ENST00000489339|RNF183 2.9952420565917617 0.861016188266951 3 Y 1 11 11.594 0.0 0.0 0.85704 0.0 0.0 1171.7008908560333 0.0 1171.7008908560333 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.85704 - 15 + 1 1.507 39985.2 1.0 10659 5648 16294 HBL1_DMSO_200M_050219_1,16309 HBL1_DMSO_200M_050219_1,16309,TLLLIFSIFWT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16310 79.172 233.0 235210.0 25 0 24853.0 + 2305 AQIEDLQVKL 10 94 578.8318556235142 1155.6491583138284 2 578.8325073122978 MULTI CID FTMS 0 0 0 16294 364765.0625 0.1605869303485429 5 -0.4357147216796875 16 Unmodified _AQIEDLQVKL_ ENSG00000157933|ENST00000378536|SKI 28.49450938151212 0.328477364964909 3 [QA]{I|L}ED[Q{I|L}]VK{I|L} 10 0 + 47.602 0.0 0.0 4.1191 4.1191 85.652 0.0 0.0 0.0 4.136890462689138 5.818875814749802 4.136890462689138 47.60221960935894 0 0.8494850021680094 0.9208187539523752 0.4247425010840047 0.0 + + [QA]{I|L}ED[Q{I|L}]VK{I|L} 4.1191 + + 663 + 1 1.507 48235.3 1.0 10660 5648 16294 HBL1_DMSO_200M_050219_1,16310 HBL1_DMSO_200M_050219_1,16310,AQIEDLQVKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16311 79.181 501.0 207970.0 25 0 33496.0 37581 TLISEWVIPIR 11 176 663.8950121760205 1325.7754714188409 2 663.8943969607353 MULTI CID FTMS 0 0 0 16294 357761.375 0.336394994620437 1 -0.0566482543945312 17 Unmodified _TLISEWVIPIR_ nc|ENSG00000260565|Q9NX77|ERVK13-1 2.735195868890462 0.8622431031272658 3 Y 1 11 12.218 0.0 0.0 0.92161 0.0 0.0 1144.7009455172768 0.0 1144.7009455172768 0.0 1.940900856914407 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.92161 - 101 + 1 1.507 89864.7 1.0 10661 5648 16294 HBL1_DMSO_200M_050219_1,16311 HBL1_DMSO_200M_050219_1,16311,TLISEWVIPIR False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16312 79.184 138.0 539320.0 25 0 38774.0 + 20868 LMKLINPLYF 10 97 626.3609505499721 1250.7073481667442 2 626.8624755740166 MULTI CID FTMS 0 0 0 16294 354480.84375 0.095552342264074 7 -0.6117401123046875 18 Unmodified _LMKLINPLYF_ REV__ENST00000375110.6_1_10:32594803-32667680:-|nuORF 7.910154910731844 0.6900473968920092 3 SVSA[Q{I|L}] 6 -1 25.406 0.0 0.0 2.0313 0.0 0.0 647.3867054669937 0.0 647.3867054669937 0.0 10.457574905606748 0.0 0.0 0 0.0 0.0 0.0 0.0 SVSA[Q{I|L}] 2.0313 - 136 1 1.507 58737.2 1.0 10662 5648 16294 HBL1_DMSO_200M_050219_1,16312 HBL1_DMSO_200M_050219_1,16312,LMKLINPLYF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16313 79.193 528.0 321590.0 25 0 34623.0 + -1 MYLGYEYVTAIR 12 136 747.8693089261162 0 747.8674194216728 PEAK CID FTMS 0 0 0 16294 298596.1875 1.0 0 0.0 19 Oxidation (M) _M(Oxidation (M))YKFQSCFRRI_ nc|ENSG00000091513|P02787|TF;ENSG00000091513|ENST00000402696|TF 7.608950283845883 0.472344094183283 3 Y{I|L}GYEYVK{I|L} 9 -1 64.562 0.0 0.0 4.3222 0.0 0.0 147.04177188651607 215.0832918756469 362.125063762163 0.0 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.6421590589602533 Y{I|L}GYEYVK{I|L} 4.3222 - 332 + 1 1.507 123956.6 1.0 10663 5648 16294 HBL1_DMSO_200M_050219_1,16313 HBL1_DMSO_200M_050219_1,16313,MYKFQSCFRRI False False MYLGYEYVTAIR 79.19334 747.867419421673 2531956.75 16294.0 nc|ENSG00000091513|P02787|TF;;ENSG00000091513|ENST00000402696|TF 7.864669005076091 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16314 79.195 100.0 645740.0 25 0 98905.0 + + -1 TVVGELSRL 9 88 487.29033256558233 972.5661121979648 2 487.2867309451103 MULTI CID FTMS 0 0 0 16294 323007.96875 0.1351382570418944 -6 0.5300521850585938 20 Carbamidomethyl (C) _TVVLC(Carbamidomethyl (C))VIGL_ ENSG00000136631|ENST00000644510|VPS45;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;nc|ENSG00000136631|Q9NRW7-2|VPS45 24.67388899826682 0.2172451872415813 3 {[TV]|[{I|L}S]}VGE{I|L}RS{I|L} 9 -1 + 71.336 0.0 0.0 7.3348 7.3348 82.105 0.0 0.0 0.0 27.147642715192504 1.4612803567823818 1.4612803567823818 1.4612803567823818 0 0.5 2.0 0.4247425010840047 0.3494850021680094 {[TV]|[{I|L}S]}VGE{I|L}RS{I|L};{[TV]|[{I|L}S]}VGE{I|L}RTV;{[TV]|[{I|L}S]}VW{I|L}RS{I|L};{[TV]|[{I|L}S]}VW{I|L}RTV;{[TV]|[{I|L}S]}V{I|L}WRS{I|L};{[TV]|[{I|L}S]}V{I|L}WRTV;{[TV]|[{I|L}S]}RE{I|L}RS{I|L};{[TV]|[{I|L}S]}RE{I|L}RTV;{[TV]|[{I|L}S]}{I|L}VWRS{I|L};{[TV]|[{I|L}S]}{I|L}VWRTV 7.3348;7.1846;6.6687;6.5185;6.3592;6.209;6.1546;6.0044;5.7139;5.5636 -;-;-;-;-;-;-;-;-;- 214 + 1 1.507 52031.3 1.0 10664 5648 16294 HBL1_DMSO_200M_050219_1,16314 HBL1_DMSO_200M_050219_1,16314,TVVLCVIGL False False TVVGELSRL 79.195498 487.28673094511 5354158.0 16294.0 ENSG00000136631|ENST00000644510|VPS45;;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;;nc|ENSG00000136631|Q9NRW7-2|VPS45 4.17941411336263 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16316 79.201 97.0 585850.0 25 0 52139.0 + 25046 MPTPLVPSV 9 103 470.7622087067823 939.5098644803644 2 470.7650634646416 MULTI CID FTMS 0 0 0 16315 112741.03125 0.4704579623194223 1 -0.123321533203125 1 Unmodified _MPTPLVPSV_ ENSG00000198399|ENST00000355123|ITSN2;nc|ENSG00000198399|Q9NZM3-2|ITSN2;nc|ENSG00000198399|Q9NZM3-3|ITSN2;nc|ENSG00000198399|Q9NZM3-4|ITSN2 42.09456458481378 0.0639583784996157 3 [{I|L}P]VTPM 6 6 23.031 0.0 0.0 2.4513 0.0 0.0 0.0 298.13996636928954 298.13996636928954 2.3653931239471184 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.3494850021680094 0.0 [{I|L}P]VTPM 2.4513 - 361 1 1.513 51206.1 1.0 10665 5649 16315 HBL1_DMSO_200M_050219_1,16316 HBL1_DMSO_200M_050219_1,16316,MPTPLVPSV True True MPTPLVPSV 79.201029 470.765063464642 2818913.5 16315.0 ENSG00000198399|ENST00000355123|ITSN2;;nc|ENSG00000198399|Q9NZM3-4|ITSN2;;nc|ENSG00000198399|Q9NZM3-3|ITSN2;;nc|ENSG00000198399|Q9NZM3-2|ITSN2 4.206907908121745 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16317 79.211 564.0 123940.0 25 0 7146.6 + -1 SMLEEGKEPWTV 12 130 703.3373124226476 1404.6600719120952 2 703.3376342654228 MULTI CID FTMS 0 0 0 16315 58855.90625 0.2411227727155583 1 -0.123321533203125 2 Oxidation (M) _AM(Oxidation (M))LCVWLYMFL_ ENSG00000170949|ENST00000683776|ZNF160;nc|ENSG00000170949|Q9HCG1-2|ZNF160 21.74664581756881 0.5815847713327531 3 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}EE{I|L}[NS][WP]S{I|L} 12 -1 + 46.751 0.0 0.0 3.3283 3.3283 68.164 0.0 0.0 0.0 3.799887736025262 1.4612803567823818 1.4612803567823818 0.4542290286760959 0 0.8494850021680094 1.6989700043360187 0.2215141619232908 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}EE{I|L}[NS][WP]S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EE{I|L}[NS][{I|L}P]C(Carbamidomethyl (C)){I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EE[WK][WP]S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EE[WK][{I|L}P]C(Carbamidomethyl (C)){I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EE{I|L}[NS][WP]TV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EE[WK][WP]TV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[VA]|[{I|L}G]}[NS]{I|L}EE{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EE[WK]{[VA]|[{I|L}G]}{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EE{I|L}[NS]{[WT]|[RM]}PV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EE[WK]{[WT]|[RM]}PV 3.3283;3.2959;3.2862;3.2538;3.2242;3.1822;3.0578;3.0135;2.8522;2.8101 -;-;-;-;-;-;-;-;-;- 1655 + 1 1.513 55977.9 1.0 10666 5649 16315 HBL1_DMSO_200M_050219_1,16317 HBL1_DMSO_200M_050219_1,16317,AMLCVWLYMFL False False SMLEEGKEPWTV 79.210931 703.337634265423 734702.9375 16315.0 ENSG00000170949|ENST00000683776|ZNF160;;nc|ENSG00000170949|Q9HCG1-2|ZNF160 7.469363371531169 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16318 79.212 52.0 1279700.0 25 0 135850.0 + 44984 YPRQQLLTL 9 83 566.3304234358819 1130.6462939385638 2 566.3301879763603 MULTI CID FTMS 0 0 0 16315 624679.375 0.6821462764498066 -1 0.0566482543945312 3 Unmodified _YPRQQLLTL_ ENSG00000071539|ENST00000166345|TRIP13 20.453626601364224 0.2830276176381075 3 [{I|L}T]PH[HS]{I|L}{I|L}T{I|L} 10 5 + 42.54 0.0 0.0 3.7624 3.7624 68.692 0.0 0.0 0.0 14.71726222832956 4.871567289424121 4.871567289424121 0.1230450566754512 0 0.718765315847925 1.5228787452803376 0.0 0.0 [{I|L}T]PH[HS]{I|L}{I|L}T{I|L};[{I|L}T]{I|L}[HT]GY{I|L}T{I|L};[{I|L}T]P[TP]Y{I|L}{I|L}T{I|L};[{I|L}T]PHT[HV]{I|L}T{I|L};[{I|L}T]{I|L}[HT]G{I|L}YT{I|L};[{I|L}T]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}Q{I|L}{I|L}T{I|L};[{I|L}T]P[TP]{I|L}Y{I|L}T{I|L};[{I|L}T]PHV[HT]{I|L}T{I|L};[{I|L}T]P[TP]{I|L}{I|L}YT{I|L};[{I|L}T]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}[AG]{I|L}{I|L}T{I|L} 3.7624;3.7515;3.5662;3.3404;3.3296;3.3;3.1442;3.015;2.7222;2.4894 -;-;-;-;-;-;-;-;-;- 504 1 1.513 53144.5 1.0 10667 5649 16315 HBL1_DMSO_200M_050219_1,16318 HBL1_DMSO_200M_050219_1,16318,YPRQQLLTL False True YPRQQLLTL 79.2123 566.33018797636 9029576.0 16315.0 ENSG00000071539|ENST00000166345|TRIP13 3.811405499776205 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16319 79.214 59.0 1166700.0 25 0 150830.0 + 44819 YPNLQLREI 9 96 573.3190960351423 1144.6236391370844 2 573.3195068240166 MULTI CID FTMS 0 0 0 16315 498803.40625 0.3520512731157789 3 -0.2512588500976562 4 Unmodified _YPNLQLREI_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 17.04857598603903 0.3751983262162568 3 YPN{I|L}Q{I|L}W{I|L}V 9 3 + 65.371 0.0 0.0 5.7111 5.7111 75.018 0.0 0.0 0.0 28.02719441874381 0.222763947111531 0.222763947111531 0.222763947111531 0 0.5796896906561032 1.154901959985743 0.0 0.0 YPN{I|L}Q{I|L}W{I|L}V;YPN{I|L}Q{I|L}WV{I|L};YPVQQ{I|L}W{I|L}V;YPVQQ{I|L}WV{I|L};YPN{I|L}Q{I|L}GNKV;YPGG{I|L}Q{I|L}W{I|L}V;YPN{I|L}[AG]{I|L}W{I|L}V;YPN{I|L}[AG]{I|L}WV{I|L};YPGG{I|L}Q{I|L}WV{I|L};YPV[AG]Q{I|L}W{I|L}V 5.7111;5.6916;5.5981;5.5786;4.9547;4.9066;4.9066;4.8872;4.8872;4.7936 -;-;-;-;-;-;-;-;-;- 779 + 1 1.513 58154.2 1.0 10668 5649 16315 HBL1_DMSO_200M_050219_1,16319 HBL1_DMSO_200M_050219_1,16319,YPNLQLREI False True YPNLQLREI 79.213773 573.319506824017 46906120.0 16315.0 nc|ENSG00000134644|Q14671|PUM1;;nc|ENSG00000134644|Q14671-4|PUM1;;nc|ENSG00000134644|Q14671-2|PUM1;;ENSG00000134644|ENST00000426105|PUM1 3.932512124379476 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16320 79.218 201.0 731100.0 25 0 118300.0 14677 IIRMDLHL 8 126 337.5308668922506 1009.5707712769516 3 337.5306579470634 MULTI CID FTMS 0 0 0 16315 267855.96875 0.285183732326136 -2 0.1046295166015625 5 Unmodified _IIRMDLHL_ ENSG00000196184|ENST00000423932|OR10J1;nc|ENSG00000196184|P30954|OR10J1 26.268140514670165 0.4916104673212489 3 {I|L}P 2 7 32.563 0.0 0.0 3.2254 0.0 0.0 0.0 796.4145157284772 796.4145157284772 12.87015633863859 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {I|L}P 3.2254 - 89 + 1 1.513 122086.9 1.0 10669 5649 16315 HBL1_DMSO_200M_050219_1,16320 HBL1_DMSO_200M_050219_1,16320,IIRMDLHL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16321 79.227 553.0 206930.0 25 0 30104.0 + 1040 AGFAAGVL 8 150 705.3924355219276 704.3851590553276 1 706.4406616091728 MULTI CID FTMS 0 0 0 -1 0 6 Unmodified _AGFAAGVL_ REV__ENSG00000119711|ENST00000553458|ALDH6A1;REV__nc|ENSG00000119711|Q02252-2|ALDH6A1 11.114462752807354 0.7467182956244686 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W{I|L} 4 -1 20.93 0.0 0.0 2.9714 0.0 0.0 0.0 127.06786759906836 127.06786759906836 1.93012478770476 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W{I|L} 2.9714 - 627 1 1.513 85285.6 1.0 10670 5649 16315 HBL1_DMSO_200M_050219_1,16321 HBL1_DMSO_200M_050219_1,16321,AGFAAGVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16322 79.238 609.0 345270.0 25 0 16023.0 + 20915 LMYEHELEQL 10 221 652.813938143309 1303.613323353418 2 652.8144409060478 MULTI CID FTMS 0 0 0 16315 203809.96875 0.904170527958549 -2 0.1046295166015625 7 Unmodified _LMYEHELEQL_ ENSG00000197892|ENST00000524189|KIF13B 62.57269311338072 0.0298375429882549 3 {[QN]|[E{I|L}]|[KN]}EHYM{I|L}EQ{I|L} 10 4 + 79.836 0.0 0.0 6.1242 6.1242 83.355 0.0 0.0 0.0 12.729105467659837 16.53212513775344 12.729105467659837 4.757724967479874 0 0.9436726795685342 0.6777807052660807 1.3778623208748888 0.0 {[QN]|[E{I|L}]|[KN]}EHYM{I|L}EQ{I|L};{[QN]|[E{I|L}]|[KN]}HEYM{I|L}EQ{I|L};{[QN]|[E{I|L}]|[KN]}EHYME{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}EHYEM{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}EHYM{I|L}E[AG]{I|L};{[QN]|[E{I|L}]|[KN]}HEYME{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}EHYE{I|L}MQ{I|L};{[QN]|[E{I|L}]|[KN]}EHYEQ{I|L}M{I|L};{[YC]|[HE]}YE{I|L}M{I|L}EQ{I|L};[AG][WD]E{I|L}M{I|L}EQ{I|L} 6.1242;5.7593;5.6624;5.4315;5.4212;5.2974;5.2964;5.2228;5.1478;5.1227 -;-;-;-;-;-;-;-;-;- 21474 1 1.513 155140.4 1.0 10671 5649 16315 HBL1_DMSO_200M_050219_1,16322 HBL1_DMSO_200M_050219_1,16322,LMYEHELEQL True True LMYEHELEQL 79.237991 652.814440906048 5650468.5 16315.0 ENSG00000197892|ENST00000524189|KIF13B 5.221226533253987 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16323 79.249 632.0 355520.0 25 0 64534.0 -1 DIFGMFWFCFF 11 137 766.8192875983325 1531.624022263465 2 767.3211547732353 MULTI CID FTMS 0 0 0 16315 156566.78125 0.8842963413106979 -3 0.2195281982421875 8 Carbamidomethyl (C),Oxidation (M) _DIFGM(Oxidation (M))FWFC(Carbamidomethyl (C))FF_ ENST00000291295.13_1_19:47113748-47113955:+|nuORF 3.2813086475875832 0.8596665074481906 3 [YR]{I|L}PQ 5 -1 23.134 0.0 0.0 1.5104 0.0 0.0 0.0 871.2411713899841 871.2411713899841 3.396577785411953 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 [YR]{I|L}PQ 1.5104 - 739 1 1.513 153975.8 1.0 10672 5649 16315 HBL1_DMSO_200M_050219_1,16323 HBL1_DMSO_200M_050219_1,16323,DIFGMFWFCFF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16324 79.261 712.0 585450.0 25 0 28129.0 + 30621 RFIPYTEEF 9 263 601.298269098321 1200.581985263442 2 601.2998535037041 MULTI CID FTMS 0 0 0 16315 152752.609375 0.3100581120676006 -3 0.2195281982421875 9 Unmodified _RFIPYTEEF_ ENSG00000107651|ENST00000369075|SEC23IP;nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP 78.7280429016045 0.0178249292250809 3 [R{M(Oxidation (M))|F}]{I|L}PYTEE{M(Oxidation (M))|F} 9 0 + 71.679 0.0 0.0 5.9704 5.9704 90.453 0.0 0.0 0.0 6.311508337315175 53.19348188000196 6.311508337315175 19.147423455882222 0 1.048455006504028 0.0 1.1307196863200843 0.3054621874040891 + + [R{M(Oxidation (M))|F}]{I|L}PYTEE{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}P{I|L}[HT]TEE{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TE[R{I|L}]{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[{I|L}T][W{I|L}]YTEE{M(Oxidation (M))|F};[EP]V{I|L}[HT]TEE{M(Oxidation (M))|F};{I|L}{I|L}{[WT]|[RM]}YTEE{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}P{I|L}[{I|L}P]EEE{M(Oxidation (M))|F};[DP]{I|L}{I|L}[HT]TEE{M(Oxidation (M))|F};[{I|L}T]{M(Oxidation (M))|F}E[R{I|L}]{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[QG]|[NA]}V[HT][RV]EE{M(Oxidation (M))|F} 5.9704;4.3755;4.3282;4.014;4.0023;3.9363;3.874;3.7262;3.6807;3.6654 +;-;-;-;-;-;-;-;-;- + 4034 1 1.513 293973.1 1.0 10673 5649 16315 HBL1_DMSO_200M_050219_1,16324 HBL1_DMSO_200M_050219_1,16324,RFIPYTEEF True True RFIPYTEEF 79.26142 601.299853503704 9480689.0 16315.0 nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP;;ENSG00000107651|ENST00000369075|SEC23IP 7.072829723358154 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16325 79.274 745.0 427540.0 25 0 23668.0 + 19476 LFHKIQDQH 9 241 583.3079031239291 1164.6012533146582 2 583.8141357302666 MULTI CID FTMS 0 0 0 16315 153262.03125 0.1537823056241086 -3 0.2195281982421875 10 Unmodified _LFHKIQDQH_ REV__ENST00000311117.7_1_7:104752890-104753013:+|nuORF 19.256988751693697 0.3154191944385105 3 [EP]{I|L}{I|L}N[TA]A{I|L}SH 11 -1 + 42.732 0.0 0.0 3.6692 3.6692 72.781 0.0 0.0 0.0 2.79840696594043 4.656144957418356 2.79840696594043 2.79840696594043 0 0.0 1.2218487496163564 0.7742275032520141 0.7302046884880937 [EP]{I|L}{I|L}N[TA]A{I|L}SH;[{I|L}P]NK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}SH;[EP]{I|L}QV[TA]A{I|L}SH;[{I|L}P]NKNNE{I|L}SH;[NP]{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}SH;[NP]{I|L}KNNE{I|L}SH;[VG]APK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}SH;[VG]APKNNE{I|L}SH;{NN|[MP]|[D{I|L}]|[EV]}A[RK]EP{I|L}SH;[{I|L}P]QP[R{M(Oxidation (M))|F}]A{I|L}SH 3.6692;3.4289;3.3668;3.3643;3.3133;3.2486;3.1975;3.1329;3.13;3.0308 -;-;-;-;-;-;-;-;-;- 8031 1 1.513 235021.7 1.0 10674 5649 16315 HBL1_DMSO_200M_050219_1,16325 HBL1_DMSO_200M_050219_1,16325,LFHKIQDQH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16326 79.277 71.0 667010.0 25 0 77972.0 27386 PIFQDFSL 8 80 483.7487376426572 0 483.7473937869072 PEAK CID FTMS 0 0 0 16315 119467.015625 0.7293697499473188 2 -0.1947021484375 11 Unmodified _PIFQDFSL_ ENSG00000135776|ENST00000344517|ABCB10 15.768221252438446 0.4767174489346095 3 CT 2 8 10.133 0.0 0.0 1.0495 0.0 0.0 644.3506419339487 114.05652795963124 758.40716989358 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 CT 1.0495 - 139 + 1 1.513 42661.4 1.0 10675 5649 16315 HBL1_DMSO_200M_050219_1,16326 HBL1_DMSO_200M_050219_1,16326,PIFQDFSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16327 79.291 758.0 91196.0 25 0 5656.9 5998 DRRRVRVRLLS 11 136 713.4474365115166 0 713.4474365115166 PEAK CID FTMS 0 0 0 -1 0 12 Unmodified _DRRRVRVRLLS_ ENSG00000115317|ENST00000258080|HTRA2;ENST00000465521.1_1_2:74757592-74758334:+|nuORF;ENST00000484352.5_1_2:74757313-74758690:+|nuORF;ENST00000484881.5_1_2:74756974-74758788:+|nuORF;nc|ENSG00000115317|O43464-2|HTRA2;nc|ENSG00000115317|O43464-3|HTRA2;nc|ENSG00000115317|O43464-4|HTRA2 1.3295316138638542 0.4761840153648598 3 A 1 11 6.9897 0.0 0.0 0.49055 0.0 0.0 640.4494862048706 710.3886812799436 1350.8381674848142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.49055 - 50 + 1 1.513 51758.0 1.0 10676 5649 16315 HBL1_DMSO_200M_050219_1,16327 HBL1_DMSO_200M_050219_1,16327,DRRRVRVRLLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16328 79.304 800.0 55544.0 25 0 3958.2 -1 0 92 1102.480639636517 0 1102.480639636517 PEAK CID FTMS 0 0 0 -1 0 13 3 Y{I|L}V[TA]T 6 -1 19.486 0.0 0.0 0.88456 0.0 0.0 1297.498436400184 254.07932459049064 1551.5777609906747 0.0 0.0 0.0 0.0 0 0.5 0.0 1.424742501084005 0.0 Y{I|L}V[TA]T 0.88456 - 777 + 1 1.513 35720.2 0.7599999904632568 10677 5649 16315 HBL1_DMSO_200M_050219_1,16328 HBL1_DMSO_200M_050219_1,16328, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16329 79.319 770.0 147630.0 25 0 10467.0 -1 FLKRHKKKCI 10 181 679.4181396365166 0 679.4181396365166 PEAK CID FTMS 0 0 0 -1 0 14 Carbamidomethyl (C) _FLKRHKKKC(Carbamidomethyl (C))I_ ENSG00000034693|ENST00000367591|PEX3 7.289230182591677 0.3953776778296116 3 N{I|L}{M(Oxidation (M))|F}KGD 6 -1 19.336 0.0 0.0 1.4251 0.0 0.0 563.4181776349625 116.051095830725 679.4692734656875 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1595680409956017 0.3494850021680094 N{I|L}{M(Oxidation (M))|F}KGD 1.4251 - 461 + 1 1.513 83500.5 1.0 10678 5649 16315 HBL1_DMSO_200M_050219_1,16329 HBL1_DMSO_200M_050219_1,16329,FLKRHKKKCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16331 79.323 14.0 4007100.0 25 0 336200.0 15525 IPVLANFIV 9 97 493.30750595992856 984.6004589866571 2 493.3078796267509 MULTI CID FTMS 0 0 0 16330 2437301.5 0.1658956344011779 34 -2.2667388916015625 1 Unmodified _IPVLANFIV_ ENSG00000146085|ENST00000274813|MMUT 21.74664581756881 0.2544899275067181 3 {I|L}P 2 7 43.711 0.0 0.0 4.4395 0.0 0.0 0.0 771.4434084783185 771.4434084783185 10.52378753635658 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.4395 + + 356 + 1 1.513 48843.8 1.0 10679 5650 16330 HBL1_DMSO_200M_050219_1,16331 HBL1_DMSO_200M_050219_1,16331,IPVLANFIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16332 79.324 44.0 1246900.0 25 0 156440.0 + 34968 SQLELGVHL 9 87 498.279559964952 994.544566996704 2 498.2798950076103 MULTI CID FTMS 0 0 0 16330 803767.625 0.2236244407598807 3 -0.2557449340820312 2 Unmodified _SQLELGVHL_ DLG5|p.R1690Sfs*26|1|0.31|ENSG00000151208|chr10:77805761-77805762|-/A|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;nc|ENSG00000151208|Q8TDM6-5|DLG5 39.957323273325 0.0756908302845263 3 {[QS]|[NT]}{I|L}G{I|L}EVH{I|L} 9 2 + 60.948 0.0 0.0 6.1282 6.1282 90.873 0.0 0.0 0.0 18.244883261787145 11.27121139309525 11.27121139309525 18.750612633917 0 0.8252574989159953 0.0 0.8494850021680094 0.0 {[QS]|[NT]}{I|L}G{I|L}EVH{I|L};{[QS]|[NT]}{I|L}G{I|L}E[H{I|L}]V;{[QS]|[NT]}{I|L}G{I|L}[PA][NP]V;{[QS]|[NT]}{I|L}G[PA]{I|L}[NP]V;{[QS]|[NT]}{I|L}[QP]{I|L}[NP]V 6.1282;4.2429;1.433;0.95326;0.59915 -;-;-;-;- 274 + 1 1.513 51447.8 1.0 10680 5650 16330 HBL1_DMSO_200M_050219_1,16332 HBL1_DMSO_200M_050219_1,16332,SQLELGVHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16333 79.326 14.0 3628600.0 25 0 411260.0 + 3978 DALQYLQKV 9 75 539.3006551795852 1076.5867574259703 2 539.3010742068291 MULTI CID FTMS 0 0 0 16330 3594590.5 0.4305691874742917 -2 0.1799697875976562 3 Unmodified _DALQYLQKV_ ENSG00000181404|ENST00000696149|WASHC1;ENST00000400706.3_1_12:78799-87272:+|nuORF;ENST00000557932.5_1_15:102506277-102513446:+|nuORF;ENST00000558686.5_1_15:102506217-102512799:+|nuORF;ENST00000559163.6_1_15:102506277-102512065:+|nuORF;ENST00000559884.5_1_15:102506277-102506794:+|nuORF;nc|ENSG00000185596|C4AMC7|WASH3P;nc|ENSG00000291134|Q6VEQ5|WASH2P 69.10491478415734 0.0214449631113747 3 {[DA]|[EG]}{I|L}QY{I|L}QKV 9 0 + 85.502 0.0 0.0 7.9419 7.9419 93.075 0.0 0.0 0.0 60.80880436788473 11.082268588648247 11.082268588648247 9.208187539523747 0 1.924742501084005 1.6989700043360187 0.0 1.1462566630072957 + + {[DA]|[EG]}{I|L}QY{I|L}QKV;{[DA]|[EG]}{I|L}QY{I|L}[AG]KV;{[DA]|[EG]}{I|L}[AG]Y{I|L}QKV;{[DA]|[EG]}{I|L}[AG]Y{I|L}[AG]KV;W{I|L}Q[RH]Q[{I|L}P];W{I|L}[AG][RH]Q[{I|L}P];W{I|L}Q[RH][AG][{I|L}P] 7.9419;7.0866;7.0866;6.2353;3.4826;2.6223;2.6223 +;-;-;-;-;-;- + 202 + 1 1.513 45317.2 1.0 10681 5650 16330 HBL1_DMSO_200M_050219_1,16333 HBL1_DMSO_200M_050219_1,16333,DALQYLQKV True True DALQYLQKV 79.325551 539.301074206829 77622440.0 16330.0 ENST00000400706.3_1_12:78799-87272:+|nuORF;;ENST00000559163.6_1_15:102506277-102512065:+|nuORF;;ENST00000558686.5_1_15:102506217-102512799:+|nuORF;;ENSG00000181404|ENST00000696149|WASHC1;;nc|ENSG00000185596|C4AMC7|WASH3P;;ENST00000559884.5_1_15:102506277-102506794:+|nuORF;;nc|ENSG00000291134|Q6VEQ5|WASH2P;;ENST00000557932.5_1_15:102506277-102513446:+|nuORF 8.199982643127441 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16334 79.327 23.0 1089800.0 25 0 163750.0 -1 RPVRLPLWVC 10 52 648.3743617341019 1294.7341705350036 2 648.3747436404228 MULTI CID FTMS 0 0 0 16330 2489916.0 0.941808190887131 -1 0.123321533203125 4 Carbamidomethyl (C) _RPVRLPLWVC(Carbamidomethyl (C))_ ENSG00000175514|ENST00000312457|GPR152 0.4583401331227399 0.7245164002484112 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.513 26887.0 1.0 10682 5650 16330 HBL1_DMSO_200M_050219_1,16334 HBL1_DMSO_200M_050219_1,16334,RPVRLPLWVC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16335 79.328 21.0 2368800.0 25 0 163660.0 + 43150 VYPQYVIEY 9 75 587.2950573805119 1172.5755618278238 2 587.2953369021416 MULTI CID FTMS 0 0 0 16330 2384915.5 0.0856906461662946 -5 0.4711074829101562 5 Unmodified _VYPQYVIEY_ ENSG00000105939|ENST00000242351|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1 34.10243960390752 0.1078313939113124 3 [QP]YVYV 6 5 33.901 0.0 0.0 2.8912 0.0 0.0 0.0 420.17597488078417 420.17597488078417 10.31743128760553 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 [QP]YVYV 2.8912 - 307 1 1.513 42411.4 1.0 10683 5650 16330 HBL1_DMSO_200M_050219_1,16335 HBL1_DMSO_200M_050219_1,16335,VYPQYVIEY True True VYPQYVIEY 79.327907 587.295336902142 306967584.0 16330.0 nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1;;ENSG00000105939|ENST00000242351|ZC3HAV1 4.733131408691406 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16336 79.329 26.0 2595000.0 25 0 382270.0 38728 TTYIPKRTRQ 10 82 632.3613328012864 1262.708112669373 2 632.3616821169853 MULTI CID FTMS 0 0 0 16330 1693716.875 0.8051742639166843 -2 0.1799697875976562 6 Unmodified _TTYIPKRTRQ_ ENST00000296530.12_1_4:159092581-159092647:-|nuORF 1.6526216038709556 0.7189921496796233 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 1.513 56984.1 1.0 10684 5650 16330 HBL1_DMSO_200M_050219_1,16336 HBL1_DMSO_200M_050219_1,16336,TTYIPKRTRQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16337 79.33 28.0 2302600.0 25 0 316510.0 + 12657 GVLGPIINKV 10 95 505.32379044053886 1008.6330279478776 2 505.3240539431572 MULTI CID FTMS 0 0 0 16330 1457928.25 0.8975522643686228 -1 0.123321533203125 7 Unmodified _GVLGPIINKV_ ENSG00000105808|ENST00000262940|RASA4;ENSG00000170667|ENST00000465829|RASA4B;ENST00000523568.1_7:102228019-102246337:-|nuORF;nc|ENSG00000105808|O43374-2|RASA4 34.40172386719151 0.2166836008404837 3 [VG]{I|L}GP{I|L}{I|L}NKV 10 0 + 58.694 0.0 0.0 5.8192 5.8192 86.563 0.0 0.0 0.0 22.10486674173232 7.023897166011714 7.023897166011714 9.164539485499256 0 0.7302046884880937 1.6989700043360187 0.0 0.0 + + [VG]{I|L}GP{I|L}{I|L}NKV;[VG]{I|L}GP{I|L}{I|L}GGKV;[VG]{I|L}GP{I|L}[KQ]VV;[VG]{I|L}GRR[RP]V 5.8192;4.9106;3.9305;2.6683 +;-;-;- + 657 + 1 1.513 54855.6 1.0 10685 5650 16330 HBL1_DMSO_200M_050219_1,16337 HBL1_DMSO_200M_050219_1,16337,GVLGPIINKV False True GVLGPIINKV 79.330266 505.324053943157 44814612.0 16330.0 ENSG00000105808|ENST00000262940|RASA4;;nc|ENSG00000105808|O43374-2|RASA4;;ENST00000523568.1_7:102228019-102246337:-|nuORF;;ENSG00000170667|ENST00000465829|RASA4B 7.57049544652303 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16338 79.332 78.0 819140.0 25 0 68888.0 -1 0 79 974.9628167210068 1947.9110805088133 2 975.4651367068292 MULTI CID FTMS 0 0 0 16330 1265200.75 0.9222817530085808 -1 0.123321533203125 8 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NAD{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{[RE]|[WV]}Q{[TV]|[{I|L}S]} 17 -1 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L} + + 31.437 13.512 2.3088 1.6139 1.6139 48.591 0.0 0.0 0.0 0.0 17.92464714820923 0.0 0.0 0 0.8807196863200843 0.0 0.5 0.3807196863200844 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NAD{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{[RE]|[WV]}Q{[TV]|[{I|L}S]} 1.6139 - 1290 + 1 1.513 49223.1 1.0 10686 5650 16330 HBL1_DMSO_200M_050219_1,16338 HBL1_DMSO_200M_050219_1,16338, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16339 79.333 41.0 1631300.0 25 0 362100.0 + 12646 GVLDTLTKV 9 83 473.284341856439 944.554130779678 2 473.2846557497978 MULTI CID FTMS 0 0 0 16330 1255778.25 0.3150788463468486 -2 0.1799697875976562 9 Unmodified _GVLDTLTKV_ ENSG00000214114|ENST00000397572|MYCBP;ENST00000495043.5_1_1:39330344-39338774:-|nuORF 43.77239144664712 0.0547478964384323 3 [VG]{I|L}DT{I|L}TKV 9 0 + 82.207 0.0 0.0 8.7032 8.7032 96.3 0.0 0.0 0.0 28.34482980557111 11.706962271689749 11.706962271689749 14.864692631441784 0 1.075257498915995 2.0 0.4247425010840047 0.2134679910804404 + + [VG]{I|L}DT{I|L}TKV;[VG]{I|L}DT{I|L}[KS]{I|L} 8.7032;7.1295 +;- + 231 + 1 1.513 58045.4 1.0 10687 5650 16330 HBL1_DMSO_200M_050219_1,16339 HBL1_DMSO_200M_050219_1,16339,GVLDTLTKV True True GVLDTLTKV 79.33327 473.284655749798 58745304.0 16330.0 ENSG00000214114|ENST00000397572|MYCBP;;ENST00000495043.5_1_1:39330344-39338774:-|nuORF 6.577192942301433 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16340 79.334 44.0 1698100.0 25 0 137150.0 + 31293 RLYPEGLAQL 10 80 580.3269061775125 1158.6392594218248 2 580.3276855349541 MULTI CID FTMS 0 0 0 16330 1235879.0 0.1189425281957962 -4 0.3428497314453125 10 Unmodified _RLYPEGLAQL_ ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF 37.250883937326 0.1865971120352015 3 [VP][HV][EP]G{I|L}AQ{I|L} 11 4 + 52.395 0.0 0.0 4.5221 4.5221 80.654 0.0 0.0 0.0 3.3270573808687587 34.947826353424354 3.3270573808687587 7.257724967479859 0 1.5356668758921828 0.0 0.3807196863200844 0.0 [VP][HV][EP]G{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}[PG][YV]G{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}[PG][YR]{I|L}AQ{I|L};[VP]{[CP]|[EA]}[YR]{I|L}AQ{I|L};[{I|L}A][DP][YR]{I|L}AQ{I|L};[TP][TP][YR]{I|L}AQ{I|L} 4.5221;3.8957;3.3282;3.0684;2.9847;2.7249 -;-;-;-;-;- 165 1 1.513 63079.0 1.0 10688 5650 16330 HBL1_DMSO_200M_050219_1,16340 HBL1_DMSO_200M_050219_1,16340,RLYPEGLAQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16341 79.336 19.0 2051200.0 25 0 320450.0 39688 VEERNLLSV 9 65 529.795747983749 1057.576943034298 2 529.7959472537041 MULTI CID FTMS 0 0 0 16330 1204376.75 0.1925430416504665 5 -0.4317703247070312 11 Unmodified _VEERNLLSV_ ENSG00000108953|ENST00000264335|YWHAE;ENST00000486241.1_1_17:1265194-1303470:-|nuORF;ENST00000489287.1_1_17:1268113-1303470:-|nuORF;nc|ENSG00000108953|P62258-2|YWHAE 18.1463463914782 0.3454829746528889 3 {I|L}{I|L}W 3 7 26.198 0.0 0.0 2.4772 0.0 0.0 627.3000520203433 0.0 627.3000520203433 0.0 10.937492820425804 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}W 2.4772 - 52 1 1.513 37764.0 1.0 10689 5650 16330 HBL1_DMSO_200M_050219_1,16341 HBL1_DMSO_200M_050219_1,16341,VEERNLLSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16342 79.338 101.0 797920.0 25 0 48622.0 + -1 DAANVMVYV 9 93 981.970975401102 1961.927397869004 2 982.4730102419852 MULTI CID FTMS 0 0 0 16330 1220326.375 1.0 0 0.0 12 ENST00000441719.5_1_2:86711112-86716803:+|nuORF;ENSG00000115548|ENST00000312912|KDM3A 3 [Q{I|L}]SNC(Carbamidomethyl (C))VY 7 -1 41.667 0.0 0.0 2.1238 0.0 0.0 0.0 1094.516423097773 1094.516423097773 12.55014948482242 0.0 0.0 0.0 0 0.0 0.0 0.6203715150305281 1.674742501084005 [Q{I|L}]SNC(Carbamidomethyl (C))VY 2.1238 - 2776 1 1.513 58217.3 1.0 10690 5650 16330 HBL1_DMSO_200M_050219_1,16342 HBL1_DMSO_200M_050219_1,16342, False False DAANVMVYV 79.337897 982.473010241985 8782130.0 16330.0 ENST00000441719.5_1_2:86711112-86716803:+|nuORF;;ENSG00000115548|ENST00000312912|KDM3A 2.484443326791128 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16343 79.339 36.0 1645500.0 25 0 214850.0 + 5664 DPFPWQQKV 9 86 572.7929175292451 1143.57128212529 2 572.7931396365166 MULTI CID FTMS 0 0 0 16330 1163972.625 0.5778934543462743 -2 0.1799697875976562 13 Unmodified _DPFPWQQKV_ ENSG00000182541|ENST00000331728|LIMK2;nc|ENSG00000182541|P53671-2|LIMK2;nc|ENSG00000182541|P53671-3|LIMK2 71.13359017698441 0.0206607516130725 3 [DP]{M(Oxidation (M))|F}PWQQKV 9 0 + 59.7 0.0 0.0 5.2205 5.2205 85.108 0.0 0.0 0.0 25.93250477594724 7.573166222047135 7.573166222047135 9.208187539523747 0 1.0 1.6989700043360187 0.0 1.1861818737241734 + + [DP]{M(Oxidation (M))|F}PWQQKV;[DP]{M(Oxidation (M))|F}PWQ[AG]KV;[DP]{M(Oxidation (M))|F}PW[AG]QKV;[DP]{M(Oxidation (M))|F}PW[AG][AG]KV;[DP]{M(Oxidation (M))|F}[YV][YN]KV;[DP]HH[VG]QQKV;[DP]HHQ[VG]QKV 5.2205;4.4153;4.4153;3.6139;2.5871;1.8515;1.542 +;-;-;-;-;-;- + 374 + 1 1.513 54534.1 1.0 10691 5650 16330 HBL1_DMSO_200M_050219_1,16343 HBL1_DMSO_200M_050219_1,16343,DPFPWQQKV True True DPFPWQQKV 79.339076 572.793139636517 21386584.0 16330.0 nc|ENSG00000182541|P53671-2|LIMK2;;nc|ENSG00000182541|P53671-3|LIMK2;;ENSG00000182541|ENST00000331728|LIMK2 9.304896354675291 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16344 79.34 27.0 1732400.0 25 0 118600.0 + 24175 LYVPVWRR 8 85 544.8207883877005 1087.627023842201 2 544.8218261599541 MULTI CID FTMS 0 0 0 16330 767064.25 0.1011990222117205 7 -0.6158294677734375 14 Unmodified _LYVPVWRR_ REV__ENSG00000105523|ENST00000263266|FAM83E 17.086550045450526 0.6584923310065985 3 [Y{I|L}][VP]VE{I|L}[KQ] 9 -1 + 37.113 0.0 0.0 3.4123 3.4123 73.56 0.0 0.0 0.0 10.791812460476256 3.467874862246568 3.467874862246568 3.467874862246568 0 0.0 2.0 0.0 0.0 [Y{I|L}][VP]VE{I|L}[KQ];[Y{I|L}][VP]VWRR;[Y{I|L}][VP]V[VS]{I|L}[QA];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}V]VE{I|L}[KQ];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}V]VWRR;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}V]V[VS]{I|L}[QA];[VP][Y{I|L}]VE{I|L}[KQ];[VP][Y{I|L}]VWRR;[VP][Y{I|L}]V[VS]{I|L}[QA] 3.4123;3.0934;2.8424;2.4201;2.1012;1.8502;1.0732;0.75435;0.50334 -;+;-;-;-;-;-;-;- + 96 1 1.513 47828.5 1.0 10692 5650 16330 HBL1_DMSO_200M_050219_1,16344 HBL1_DMSO_200M_050219_1,16344,LYVPVWRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16345 79.342 102.0 743340.0 25 0 169060.0 + 42759 VVGGKYID 8 63 425.73876758299417 849.4629822327884 2 425.7387878298759 MULTI CID FTMS 0 0 0 16330 641017.3125 0.4461478505180586 -3 0.2279510498046875 15 Unmodified _VVGGKYID_ REV__ENSG00000110911|ENST00000262052|SLC11A2;REV__nc|ENSG00000110911|P49281-3|SLC11A2;REV__nc|ENSG00000110911|P49281-4|SLC11A2;REV__nc|ENSG00000110911|P49281-5|SLC11A2;REV__nc|ENSG00000110911|P49281|SLC11A2 9.347437153973935 0.7675937258251505 3 VVN{I|L}[HA]A 7 -1 22.461 0.0 0.0 2.6441 0.0 0.0 0.0 142.04872486581488 142.04872486581488 1.4918546654373088 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 VVN{I|L}[HA]A 2.6441 - 26 1 1.513 63337.1 1.0 10693 5650 16330 HBL1_DMSO_200M_050219_1,16345 HBL1_DMSO_200M_050219_1,16345,VVGGKYID False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16346 79.344 67.0 541100.0 25 0 52680.0 + 24728 MPDLENRLI 9 73 550.7920895708346 1099.5696262084691 2 551.2926513552666 MULTI CID FTMS 0 0 0 16330 289261.53125 1.0 0 0.0 16 Unmodified _MPDLENRLI_ ENSG00000168807|ENST00000336278|SNTB2 11.494710602746466 0.5255349189887087 3 MPD{I|L}E 5 4 26.542 0.0 0.0 2.4139 0.0 0.0 0.0 511.30426965884993 511.30426965884993 10.398356765906122 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + MPD{I|L}E 2.4139 + + 52 + 1 1.513 35377.1 1.0 10694 5650 16330 HBL1_DMSO_200M_050219_1,16346 HBL1_DMSO_200M_050219_1,16346,MPDLENRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16347 79.357 752.0 429150.0 25 0 32700.0 + 4342 DASLVFKV 8 222 439.752570102468 877.4905872717361 2 439.7528869509697 MULTI CID FTMS 0 0 0 16330 233169.359375 0.0106488018238241 -4 0.3428497314453125 17 Unmodified _DASLVFKV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602816-23603164:-|nuORF 54.773552608820026 0.1167943196628344 3 WS{I|L}V{M(Oxidation (M))|F}K 6 3 45.772 0.0 0.0 5.2163 0.0 0.0 0.0 114.0566195123656 114.0566195123656 14.858587016744767 0.0 0.0 0.0 0 1.0114393726401687 0.0 0.0 0.1747425010840047 WS{I|L}V{M(Oxidation (M))|F}K 5.2163 - 508 + 1 1.513 247248.0 1.0 10695 5650 16330 HBL1_DMSO_200M_050219_1,16347 HBL1_DMSO_200M_050219_1,16347,DASLVFKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16348 79.367 540.0 318770.0 25 0 34459.0 -1 0 130 994.9442665832944 1987.8739802333887 2 995.442431628704 MULTI CID FTMS 0 0 0 16330 164419.921875 0.84377046957511 -1 0.123321533203125 18 3 [NP]D{I|L}HTW[C(Carbamidomethyl (C))C]DE{I|L} 12 -1 33.749 0.0 0.0 1.6977 0.0 0.0 0.0 501.2370289537575 501.2370289537575 2.23840982034174 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.7742275032520141 0.0 [NP]D{I|L}HTW[C(Carbamidomethyl (C))C]DE{I|L} 1.6977 - 6240 1 1.513 116140.0 1.0 10696 5650 16330 HBL1_DMSO_200M_050219_1,16348 HBL1_DMSO_200M_050219_1,16348, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16349 79.38 800.0 346970.0 25 0 19745.0 -1 0 275 367.23337746404815 732.4522019948963 2 367.2334167361259 MULTI CID FTMS 0 0 0 16330 158844.953125 0.6220819172754806 3 -0.2557449340820312 19 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}V{I|L} 6 -1 + 15.426 0.0 0.0 2.1061 2.1061 79.889 0.0 0.0 0.0 2.327382012758486 -12.623631843923716 -12.623631843923716 15.426325804200454 0 0.316100275075455 0.1549019599857432 0.0 0.1050541008457974 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}V{I|L} 2.1061 - 97 1 1.513 214104.8 0.8100000023841858 10697 5650 16330 HBL1_DMSO_200M_050219_1,16349 HBL1_DMSO_200M_050219_1,16349, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16350 79.39 571.0 338100.0 25 0 92240.0 -1 FYRGVKKKMKP 11 173 699.4082853715669 1396.8020178099337 2 699.4094116091728 MULTI CID FTMS 0 0 0 16330 116007.25 0.2011481198594478 -6 0.5067520141601562 20 Oxidation (M) _FYRGVKKKM(Oxidation (M))KP_ ENSG00000047365|ENST00000303965|ARAP2 3.2813086475875832 0.8596665074481906 3 [{I|L}T]WW 4 -1 11.702 0.0 0.0 0.83778 0.0 0.0 0.0 807.5011504605774 807.5011504605774 1.613452118358655 0.0 0.0 0.0 0 0.0 1.0 0.5326920700672559 0.0 [{I|L}T]WW 0.83778 - 406 1 1.513 146927.6 1.0 10698 5650 16330 HBL1_DMSO_200M_050219_1,16350 HBL1_DMSO_200M_050219_1,16350,FYRGVKKKMKP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16352 79.395 3.1 19427000.0 25 0 4026800.0 + 13669 HPYRLILTV 9 70 556.3345340563499 1110.6545151794996 2 556.3351928591728 MULTI CID FTMS 0 0 0 16351 19082166.0 1.0 0 0.0 1 Unmodified _HPYRLILTV_ ENSG00000105397|ENST00000525621|TYK2 27.628801355627647 0.1796483985696185 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}V][VP]H{I|L}TV 10 5 + 40.824 0.0 0.0 3.6757 3.6757 73.343 0.0 0.0 0.0 8.36188426947686 19.855064229975795 8.36188426947686 3.0102999566398125 0 1.2134679910804405 0.0 0.805462187404089 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}V][VP]H{I|L}TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}V][VP]{I|L}HTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}V][VP]{I|L}THV 3.6757;3.4046;2.7523 -;-;- 100 1 1.496 51249.5 1.0 10699 5651 16351 HBL1_DMSO_200M_050219_1,16352 HBL1_DMSO_200M_050219_1,16352,HPYRLILTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16353 79.396 6.2 9543700.0 25 0 1633700.0 + 5031 DGWTPLHV 8 85 462.7321557219596 923.4497585107192 2 462.7325012087822 MULTI CID FTMS 0 0 0 16351 9242303.0 0.7597431688652627 3 -0.331817626953125 2 Unmodified _DGWTPLHV_ ENSG00000183475|ENST00000332783|ASB7;nc|ENSG00000183475|Q9H672-2|ASB7 34.18733598223924 0.3315367612694167 3 {[QD]|[EN]|[WG]|[KD]|[RS]}DTP{I|L}VH 8 4 {[QD]|[EN]|[WG]|[KD]|[RS]}D + + 26.581 16.796 4.6899 2.8784 2.8784 49.977 0.0 0.0 0.0 0.0 9.785251531370807 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}DTP{I|L}VH 2.8784 - 84 + 1 1.496 52210.7 1.0 10700 5651 16351 HBL1_DMSO_200M_050219_1,16353 HBL1_DMSO_200M_050219_1,16353,DGWTPLHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16354 79.397 7.1 7861400.0 25 0 648210.0 + 13622 HPPSHWPLI 9 77 542.2903820269429 1082.5662111206857 2 542.2906371951103 MULTI CID FTMS 0 0 0 16351 7248725.0 0.5983807857089789 4 -0.3603897094726562 3 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 57.47134341890925 0.0274820932774257 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]HWP{I|L}{I|L} 9 0 + 47.06 0.0 0.0 4.3471 4.3471 70.307 0.0 0.0 0.0 0.0700718090006091 6.578832768929516 0.0700718090006091 0.0700718090006091 0 1.6936726795685342 0.0 0.6989700043360187 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]HWP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]WHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]WPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PPH{I|L}{I|L} 4.3471;4.3406;3.7124;3.6007;3.4344;2.6497;2.3716 +;-;-;-;-;-;- + 163 1 1.496 49209.6 1.0 10701 5651 16351 HBL1_DMSO_200M_050219_1,16354 HBL1_DMSO_200M_050219_1,16354,HPPSHWPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16355 79.398 15.0 2933600.0 25 0 462360.0 23171 LSRAGTSVIK 10 71 516.3136621918686 1030.6127714505371 2 516.3142578005791 MULTI CID FTMS 0 0 0 16351 2796173.25 0.3962415291084502 3 -0.331817626953125 4 Unmodified _LSRAGTSVIK_ ENSG00000126733|ENST00000373125|DACH2;nc|ENSG00000126733|Q96NX9-2|DACH2;nc|ENSG00000126733|Q96NX9-3|DACH2;nc|ENSG00000126733|Q96NX9-4|DACH2 3.2813086475875832 0.7114585191678878 3 {I|L} 1 9 9.8329 0.0 0.0 0.95408 0.0 0.0 899.5175546310044 0.0 899.5175546310044 0.0 0.4357508785945008 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.95408 + + 21 + 1 1.496 41204.6 1.0 10702 5651 16351 HBL1_DMSO_200M_050219_1,16355 HBL1_DMSO_200M_050219_1,16355,LSRAGTSVIK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16356 79.399 18.0 2715200.0 25 0 342870.0 + 25755 NITDKGIIAL 10 87 529.3161524635353 1056.6177519938706 2 529.3171874880791 MULTI CID FTMS 0 0 0 16351 1828478.125 0.5165637870327661 8 -0.6711883544921875 5 Unmodified _NITDKGIIAL_ ENSG00000125375|ENST00000557421|DMAC2L;ENST00000554438.5_1_14:50779073-50792438:+|nuORF;ENST00000555939.5_1_14:50779073-50791268:+|nuORF;ENST00000556962.1_1_14:50789283-50790835:+|nuORF 34.93206674587334 0.2110832994570416 3 {[QV]|[N{I|L}]|[RA]|[KV]}T[VS]{I|L}N{I|L}A{I|L} 10 4 + 69.628 0.0 0.0 6.5897 6.5897 89.012 0.0 0.0 0.0 14.146518864155126 16.53212513775344 14.146518864155126 9.164539485499256 0 1.3494850021680094 2.0 0.3252574989159953 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}T[VS]{I|L}N{I|L}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T[VS]{I|L}GG{I|L}A{I|L};[KA][{I|L}V]TDN{I|L}A{I|L};[KA]E[VS]{I|L}N{I|L}A{I|L};{[TV]|[{I|L}S]}Q[VS]{I|L}N{I|L}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T[VS]{I|L}A[VG]A{I|L};[KA][{I|L}V]TDGG{I|L}A{I|L};[KA]E[VS]{I|L}GG{I|L}A{I|L};{[TV]|[{I|L}S]}[AG][VS]{I|L}N{I|L}A{I|L};{[TV]|[{I|L}S]}Q[VS]{I|L}GG{I|L}A{I|L} 6.5897;5.7223;5.2508;5.1326;5.0376;4.6322;4.3835;4.2652;4.1702;4.1702 -;-;-;-;-;-;-;-;-;- 634 1 1.496 43885.4 1.0 10703 5651 16351 HBL1_DMSO_200M_050219_1,16356 HBL1_DMSO_200M_050219_1,16356,NITDKGIIAL False True NITDKGIIAL 79.399259 529.317187488079 16676584.0 16351.0 ENST00000556962.1_1_14:50789283-50790835:+|nuORF;;ENSG00000125375|ENST00000557421|DMAC2L;;ENST00000554438.5_1_14:50779073-50792438:+|nuORF;;ENST00000555939.5_1_14:50779073-50791268:+|nuORF 0.2837019364039103 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16357 79.4 23.0 2670800.0 25 0 232380.0 + 44696 YPFQIHSI 8 102 502.7638151577249 0 502.7636596560478 PEAK CID FTMS 0 0 0 16351 1799004.0 0.355301054268116 -3 0.2513504028320312 6 Unmodified _YPFQIHSI_ ENSG00000101290|ENST00000460006|CDS2;ENSG00000163624|ENST00000295887|CDS1;ENST00000379070.3_1_20:5157275-5170877:+|nuORF 92.8221339359638 1.811251314782257e-05 3 P{M(Oxidation (M))|F}Q{I|L}HS 6 2 49.395 0.0 0.0 4.9222 0.0 0.0 163.06268773284438 128.07216821842033 291.13485595126474 0.0 0.0 0.0 0.0 0 0.6382104921644451 0.0 1.8098943791441968 0.3054621874040891 + P{M(Oxidation (M))|F}Q{I|L}HS 4.9222 + + 246 + 1 1.496 53274.1 1.0 10704 5651 16351 HBL1_DMSO_200M_050219_1,16357 HBL1_DMSO_200M_050219_1,16357,YPFQIHSI True True YPFQIHSI 79.400438 502.763659656048 117232344.0 16351.0 ENSG00000163624|ENST00000295887|CDS1;;ENSG00000101290|ENST00000460006|CDS2;;ENST00000379070.3_1_20:5157275-5170877:+|nuORF 6.487638155619304 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16358 79.402 35.0 1624800.0 25 0 121170.0 + 15879 NLLTHIENV 9 94 525.7845202789968 1049.5544876247934 2 526.7910644412041 MULTI CID FTMS 0 0 0 16351 1451992.25 0.6991429193946989 -4 0.2993316650390625 7 Unmodified _ISQQLCVIF_ ENSG00000129292|ENST00000395386|PHF20L1;ENST00000477051.1_1_8:133854703-133858165:+|nuORF 13.50788311687929 0.4710407108020397 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YA{[NV]|[RG]}{I|L}[NP] 9 7 + 36.144 0.0 0.0 3.4437 3.4437 72.815 0.0 0.0 0.0 9.03089986991944 2.243012119929098 2.243012119929098 3.0102999566398125 0 0.0 1.3010299956639813 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YA{[NV]|[RG]}{I|L}[NP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AY{[NV]|[RG]}{I|L}[NP];{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]HE{I|L}[NP];{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]H{I|L}E[NP];[HT]{I|L}{I|L}NE{I|L}[NP];[KA][HK]NE{I|L}[NP];{NN|[MP]|[D{I|L}]|[EV]}K[KA]YPC{I|L};[KA]{[QN]|[E{I|L}]|[KN]}HE{I|L}[NP];{NN|[MP]|[D{I|L}]|[EV]}KDH[{I|L}P]NV;[HT]{I|L}{I|L}EN{I|L}[NP] 3.4437;3.1569;2.5833;2.0097;1.7664;1.7378;1.6005;1.5264;1.4864;1.3873 -;-;-;-;-;-;-;-;-;- 1147 1 1.496 54497.2 1.0 10705 5651 16351 HBL1_DMSO_200M_050219_1,16358 HBL1_DMSO_200M_050219_1,16358,ISQQLCVIF False False NLLTHIENV 79.401617 526.791064441204 13964979.0 16351.0 ENSG00000129292|ENST00000395386|PHF20L1;;ENST00000477051.1_1_8:133854703-133858165:+|nuORF 6.0883363087972 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16359 79.403 61.0 1276400.0 25 0 217020.0 + 30888 RIPEQIIVV 9 88 533.8349137178119 1065.6552745024237 2 533.8347045779228 MULTI CID FTMS 0 0 0 16351 1236482.375 0.7404952390762483 3 -0.331817626953125 8 Unmodified _RIPEQIIVV_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 19.361941925380144 0.3125782356748823 3 [{I|L}V][WP]Q{I|L}{I|L}VV 9 2 + 59.9 0.0 0.0 5.6209 5.6209 86.47 0.0 0.0 0.0 10.969100130080562 16.478174818886373 10.969100130080562 9.208187539523747 0 0.8807196863200843 1.5228787452803376 0.0 0.0 [{I|L}V][WP]Q{I|L}{I|L}VV;[{I|L}V][WP][AG]{I|L}{I|L}VV;[VP][W{I|L}]Q{I|L}{I|L}VV;[R{I|L}][EP]Q{I|L}{I|L}VV;[VP][RD]R{I|L}{I|L}VV;[{I|L}V][Y{M(Oxidation (M))|F}][{I|L}T]{I|L}VV;[VP][W{I|L}][AG]{I|L}{I|L}VV;[R{I|L}][EP][AG]{I|L}{I|L}VV;[VP][KP]{[DS]|[MA]|[CV]|TT}{I|L}{I|L}VV;[VP][RD][VG]{I|L}{I|L}VV 5.6209;4.7568;4.5916;4.4744;3.9357;3.8614;3.7275;3.6103;3.2798;3.0716 -;-;-;+;-;-;-;-;-;- + 135 1 1.496 69274.4 1.0 10706 5651 16351 HBL1_DMSO_200M_050219_1,16359 HBL1_DMSO_200M_050219_1,16359,RIPEQIIVV False True RIPEQIIVV 79.403132 533.834704577923 29106512.0 16351.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 7.118203004201253 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16360 79.404 40.0 1288900.0 25 0 233930.0 + 27812 PLPSQSITL 9 75 478.2763719933386 954.5381910534774 2 478.2769653201103 MULTI CID FTMS 0 0 0 16351 1154274.875 0.7130863191924584 4 -0.3603897094726562 9 Unmodified _PLPSQSITL_ ENSG00000154175|ENST00000471714|ABI3BP;nc|ENSG00000154175|Q7Z7G0-3|ABI3BP 24.020572477871973 0.2255576514309169 3 [DP]GQ{I|L}V{I|L}T{I|L} 9 5 + 35.679 0.0 0.0 3.7378 3.7378 73.504 0.0 0.0 0.0 0.668341737066001 16.72608570194872 0.668341737066001 3.0102999566398125 0 0.8182503180159344 0.0 0.0 0.3807196863200844 [DP]GQ{I|L}V{I|L}T{I|L};[DP]GQV{I|L}{I|L}T{I|L};{[QG]|[NA]}[DP]{I|L}V{I|L}T{I|L};[DP]G[AG]{I|L}V{I|L}T{I|L};{[QG]|[NA]}[DP]V{I|L}{I|L}T{I|L};[DP]G[AG]V{I|L}{I|L}T{I|L};{[VA]|[{I|L}G]}YY{I|L}{I|L}T{I|L} 3.7378;3.4224;2.632;2.3743;2.3166;2.0589;0.94707 -;-;-;-;-;-;- 131 1 1.496 44666.0 1.0 10707 5651 16351 HBL1_DMSO_200M_050219_1,16360 HBL1_DMSO_200M_050219_1,16360,PLPSQSITL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16361 79.406 67.0 1293500.0 25 0 187070.0 + 12277 GRKHPKGG 8 102 418.7444565392539 0 418.7447997927666 PEAK CID FTMS 0 0 0 16351 965374.6875 0.8595695228135479 -1 0.071380615234375 10 Unmodified _GRKHPKGG_ REV__ENSG00000154822|ENST00000615277|PLCL2;REV__nc|ENSG00000154822|Q9UPR0-2|PLCL2;REV__nc|ENSG00000154822|Q9UPR0-3|PLCL2 0.6903765706972694 0.5983587967854751 3 AV 2 -1 9.464 0.0 0.0 1.1328 0.0 0.0 145.07292672520208 517.2718337253292 662.3447604505313 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AV 1.1328 - 57 + 1 1.496 73553.0 1.0 10708 5651 16351 HBL1_DMSO_200M_050219_1,16361 HBL1_DMSO_200M_050219_1,16361,GRKHPKGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16362 79.408 81.0 881550.0 25 0 95404.0 + 35956 SVPNKDVFQEL 11 93 638.3325191712581 1274.6504854093162 2 638.3327514529228 MULTI CID FTMS 0 0 0 16351 909581.8125 0.2496960406011245 10 -0.8736343383789062 11 Unmodified _SVPNKDVFQEL_ ENSG00000115919|ENST00000264170|KYNU 40.72490554402381 0.2012291192650359 3 [VS]PYQ{M(Oxidation (M))|F}RHE{I|L} 10 6 + 81.151 0.0 0.0 6.3666 6.3666 88.283 0.0 0.0 0.0 31.492114694466693 2.3290220443144705 2.3290220443144705 9.164539485499247 0 0.7429928190999391 2.0 1.1861818737241734 0.8494850021680094 [VS]PYQ{M(Oxidation (M))|F}RHE{I|L};[VS]PY[AG]{M(Oxidation (M))|F}RHE{I|L};[VS]PY[RH]{M(Oxidation (M))|F}QE{I|L};[VS]PN[WR]{M(Oxidation (M))|F}QE{I|L};[VS]P[YK]{M(Oxidation (M))|F}RHE{I|L};[VS]PY[RH]{M(Oxidation (M))|F}[AG]E{I|L};[NP]KDV{M(Oxidation (M))|F}QY[HK];[VS]PN[WR]{M(Oxidation (M))|F}[AG]E{I|L};[VS]PGG[WR]{M(Oxidation (M))|F}QE{I|L};WP[YK]{M(Oxidation (M))|F}VD[HA]{I|L} 6.3666;5.6476;5.4259;4.8566;4.7985;4.707;4.5184;4.1376;4.1376;4.0585 -;-;-;-;-;-;-;-;-;- 1292 + 1 1.496 58171.6 1.0 10709 5651 16351 HBL1_DMSO_200M_050219_1,16362 HBL1_DMSO_200M_050219_1,16362,SVPNKDVFQEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16363 79.411 154.0 831930.0 25 0 72239.0 + 31182 RLPPDTLLQQV 11 140 640.3727216794473 1278.7308904256945 2 640.8754760622978 MULTI CID FTMS 0 0 0 16351 697851.3125 1.0 0 0.0 12 Unmodified _RLPPDTLLQQV_ ENSG00000169733|ENST00000310496|RFNG;ENST00000580953.5_1_17:80006604-80007747:-|nuORF;ENST00000582478.5_1_17:80006905-80007747:-|nuORF 14.95716135407024 0.7240205813188479 3 {[QV]|[N{I|L}]|[RA]|[KV]}Q[NP]{I|L}{I|L}{I|L}QN{I|L} 11 6 + 26.665 0.0 0.0 2.0852 2.0852 67.537 0.0 0.0 0.0 1.2050654486819212 6.046901209336575 1.2050654486819212 1.2050654486819212 0 0.337180496500464 0.0 0.0 0.2614393726401688 {[QV]|[N{I|L}]|[RA]|[KV]}Q[NP]{I|L}{I|L}{I|L}QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q[{I|L}P]{I|L}{I|L}{I|L}QN{I|L};[Q{I|L}]N[NP]{I|L}{I|L}{I|L}QN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[AG][NP]{I|L}{I|L}{I|L}QN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q[NP]{I|L}{I|L}{I|L}[AG]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q[{I|L}P]{I|L}{I|L}{I|L}[AG]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG][{I|L}P]{I|L}{I|L}{I|L}QN{I|L};[Q{I|L}]GG[NP]{I|L}{I|L}{I|L}QN{I|L};[Q{I|L}]N[NP]{I|L}{I|L}{I|L}[AG]N{I|L};[{I|L}T][VG][HA]T{I|L}{I|L}QN{I|L} 2.0852;1.991;1.5386;1.3714;1.3714;1.2771;1.2771;0.82476;0.82476;0.61159 -;-;-;-;-;-;-;-;-;- 316 1 1.496 98888.3 1.0 10710 5651 16351 HBL1_DMSO_200M_050219_1,16363 HBL1_DMSO_200M_050219_1,16363,RLPPDTLLQQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16364 79.412 37.0 1449800.0 25 0 119650.0 + 3056 AVLHTIDFQ 9 89 522.280679673034 1042.546806412868 2 522.2798339724541 MULTI CID FTMS 0 0 0 16351 673674.1875 0.139861967433148 4 -0.3603897094726562 13 Unmodified _AVLHTIDFQ_ REV__ENSG00000181234|ENST00000435159|TMEM132C 12.240655878213236 0.5053430591993562 3 {[VA]|[{I|L}G]}PE{I|L}[C(Carbamidomethyl (C))N]K{I|L} 9 -1 + 43.297 0.0 0.0 4.153 4.153 52.976 0.0 0.0 0.0 17.355312426617573 0.8366748685809 0.8366748685809 0.0 0 0.1747425010840047 2.0 0.0 0.0 {[VA]|[{I|L}G]}PE{I|L}[C(Carbamidomethyl (C))N]K{I|L};{[VA]|[{I|L}G]}PE{I|L}[MD]R{I|L};{[VA]|[{I|L}G]}PE{I|L}[YK][HS];{[VA]|[{I|L}G]}{I|L}[EP][MD]R{I|L};{[VA]|[{I|L}G]}{I|L}[EP][C(Carbamidomethyl (C))N]K{I|L};{[VA]|[{I|L}G]}{I|L}[EP][YK][HS] 4.153;4.153;3.3896;2.3545;2.3545;1.5911 -;-;-;-;-;- 103 + 1 1.496 50602.6 1.0 10711 5651 16351 HBL1_DMSO_200M_050219_1,16364 HBL1_DMSO_200M_050219_1,16364,AVLHTIDFQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16365 79.415 147.0 256640.0 25 0 22820.0 + 39606 VDKYIKSLIE 10 78 604.3483448405694 1206.6821367479388 2 604.3492309451103 MULTI CID FTMS 0 0 0 16351 591098.375 0.2588921610010583 10 -0.8736343383789062 14 Unmodified _VDKYIKSLIE_ REV__ENSG00000151150|ENST00000280772|ANK3 3.5964929083625545 0.7100006075494749 3 {I|L} 1 -1 9.9148 0.0 0.0 0.82166 0.0 0.0 1075.5867825993043 0.0 1075.5867825993043 0.0 4.430283238465815 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.82166 + + 72 + 1 1.496 32839.5 1.0 10712 5651 16351 HBL1_DMSO_200M_050219_1,16365 HBL1_DMSO_200M_050219_1,16365,VDKYIKSLIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16366 79.418 162.0 940170.0 25 0 90466.0 + 31157 RLPDTALPTL 10 133 548.8215311604566 1095.6285093877132 2 548.8228027224541 MULTI CID FTMS 0 0 0 16351 500877.15625 0.6448339599932701 -1 0.071380615234375 15 Unmodified _RLPDTALPTL_ ENSG00000262246|ENST00000251166|CORO7;ENST00000575531.5_1_16:4407102-4412712:-|nuORF;ENST00000575714.5_1_16:4408319-4455566:-|nuORF;nc|ENSG00000262246|P57737-2|CORO7;nc|ENSG00000262246|P57737-3|CORO7;nc|ENSG00000262246|P57737-4|CORO7 53.40400417844725 0.0601721406801337 3 [TP]{I|L}[RD]A{I|L}PT{I|L} 10 4 + 66.717 0.0 0.0 6.0894 6.0894 89.449 0.0 0.0 0.0 11.720449851406514 20.66946789630613 11.720449851406514 11.720449851406514 0 1.0994850021680094 1.5228787452803376 1.5598943791441968 0.0 [TP]{I|L}[RD]A{I|L}PT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[KP]A{I|L}PT{I|L};[{I|L}P][RD]TA{I|L}PT{I|L};[{I|L}T]P[RD]A{I|L}PT{I|L};[{I|L}P]T[RD]A{I|L}PT{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RP]TA{I|L}PT{I|L};[TP]{I|L}[WK]{I|L}[EP]{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[{I|L}P]A{I|L}PT{I|L};[{I|L}T]HS[KS]{I|L}PT{I|L};[VP]{[RE]|[WV]}TA{I|L}PT{I|L} 6.0894;5.0196;4.5119;4.3586;4.3267;4.0829;3.8156;3.8084;3.5338;3.5107 -;-;-;-;-;-;-;-;-;- 1095 1 1.496 125764.1 1.0 10713 5651 16351 HBL1_DMSO_200M_050219_1,16366 HBL1_DMSO_200M_050219_1,16366,RLPDTALPTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16367 79.423 252.0 812390.0 25 0 73113.0 15020 ILSTFLLIGWV 11 141 421.2555858067264 1260.7449280203791 3 421.2560302615166 MULTI CID FTMS 0 0 0 16351 495947.46875 0.3760320296080768 -2 0.1947021484375 16 Unmodified _ILSTFLLIGWV_ ENSG00000178607|ENST00000433197|ERN1 22.736283301280096 0.5583477779825423 3 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 7 + 130.11 0.0 0.0 10.32 10.32 94.432 0.0 0.0 0.0 96.57657022125366 33.20690277338224 33.20690277338224 9.164539485499247 0 0.6989700043360187 2.0 0.0 2.62345494879896 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR 10.32;9.5932 -;- 1005 + 1 1.496 177896.6 1.0 10714 5651 16351 HBL1_DMSO_200M_050219_1,16367 HBL1_DMSO_200M_050219_1,16367,ILSTFLLIGWV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16368 79.43 374.0 498010.0 25 0 76819.0 + 16347 IYMERAEDLPL 11 161 675.3405489591071 1348.666544985014 2 675.3414794802666 MULTI CID FTMS 0 0 0 16351 436789.21875 1.0 0 0.0 17 Unmodified _IYMERAEDLPL_ ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1 47.7319792270244 0.130190323903946 3 {I|L}YY 3 9 37.792 0.0 0.0 2.8022 0.0 0.0 0.0 906.419565069006 906.419565069006 4.922341454254486 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}YY 2.8022 - 449 + 1 1.496 136820.7 1.0 10715 5651 16351 HBL1_DMSO_200M_050219_1,16368 HBL1_DMSO_200M_050219_1,16368,IYMERAEDLPL False True IYMERAEDLPL 79.429565 675.341479480267 4510729.0 16351.0 ENSG00000139641|ENST00000394048|ESYT1;;nc|ENSG00000139641|Q9BSJ8-2|ESYT1 6.023725350697835 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16369 79.437 393.0 336680.0 25 0 29018.0 + 42851 VVLGEFGVRNV 11 138 594.8403079034211 1187.6660628736422 2 594.8414184451103 MULTI CID FTMS 0 0 0 16351 432164.34375 0.0848115101481949 8 -0.6711883544921875 18 Unmodified _VVLGEFGVRNV_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 65.47368725323818 0.0469305343733202 3 VV{I|L}GE{M(Oxidation (M))|F}GV[RN]V 11 0 + 99.998 0.0 0.0 8.4197 8.4197 89.964 0.0 0.0 0.0 87.27852596143639 6.320010579541034 6.320010579541034 5.523787536356593 0 1.0994850021680094 2.0 0.7302046884880937 0.6989700043360187 + + VV{I|L}GE{M(Oxidation (M))|F}GV[RN]V;VVVAE{M(Oxidation (M))|F}GV[RN]V;VV{I|L}W{M(Oxidation (M))|F}R[RN]V;VV[KC]RR{I|L}[WE] 8.4197;7.9546;6.7013;2.8751 +;-;-;- + 565 + 1 1.496 101410.3 1.0 10716 5651 16351 HBL1_DMSO_200M_050219_1,16369 HBL1_DMSO_200M_050219_1,16369,VVLGEFGVRNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16370 79.439 123.0 571090.0 25 0 69544.0 12201 GQSGLLVNI 9 106 450.7609671869556 899.5073814407111 2 450.7609435915947 MULTI CID FTMS 0 0 0 16351 321749.6875 0.8393588941843443 -1 0.071380615234375 19 Unmodified _GQSGLLVNI_ ENST00000544643.5_1_16:30772733-30773129:-|nuORF 32.30548876998284 0.1201446275138228 3 MPP{I|L} 4 8 23.532 0.0 0.0 2.6161 0.0 0.0 443.2715853975455 0.0 443.2715853975455 0.0 8.125918950875501 0.0 0.0 0 0.0 0.0 0.0 0.0 MPP{I|L} 2.6161 - 666 + 1 1.496 56765.5 1.0 10717 5651 16351 HBL1_DMSO_200M_050219_1,16370 HBL1_DMSO_200M_050219_1,16370,GQSGLLVNI True True HGLLLPHI 79.439136 450.760943591595 509166.1875 16351.0 nc|ENSG00000150712|Q9C0I1-3|MTMR12;;nc|ENSG00000150712|Q9C0I1-2|MTMR12;;ENSG00000150712|ENST00000382142|MTMR12 -0.4335578282674153 2.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16371 79.447 440.0 240160.0 25 0 10730.0 -1 LCCCCRWCCCC 11 124 763.7237992310874 0 763.7253906130791 PEAK CID FTMS 0 0 0 16351 283057.21875 1.0 0 0.0 20 4 Carbamidomethyl (C) _LC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))RWCCCC_ ENSG00000011021|ENST00000346436|CLCN6;nc|ENSG00000011021|P51797-2|CLCN6;nc|ENSG00000011021|P51797-3|CLCN6;nc|ENSG00000011021|P51797-4|CLCN6;nc|ENSG00000011021|P51797-5|CLCN6;nc|ENSG00000011021|P51797-6|CLCN6 1.4819007175156935 0.4761840153648598 3 T{I|L}NND{I|L}{M(Oxidation (M))|F} 7 -1 34.839 0.0 0.0 2.2839 0.0 0.0 335.7982321518246 369.25193201236567 705.0501641641903 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 T{I|L}NND{I|L}{M(Oxidation (M))|F} 2.2839 - 684 + 1 1.496 81673.1 1.0 10718 5651 16351 HBL1_DMSO_200M_050219_1,16371 HBL1_DMSO_200M_050219_1,16371,LCCCCRWCCCC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16373 79.451 4.9 6824900.0 25 0 427700.0 + 28701 PVSFRNTWL 9 56 560.3015923871525 1118.5886318411049 2 560.3018676638603 MULTI CID FTMS 0 0 0 16372 10701142.0 0.0459046555496941 -5 0.3558883666992187 1 Unmodified _PVSFRNTWL_ REV__ENSG00000077157|ENST00000608999|PPP1R12B;REV__ENST00000367272.4_1_Y:28425247-28427584:-|nuORF;REV__nc|ENSG00000077157|O60237-6|PPP1R12B 4.75600775471527 0.7486543447549536 3 [VP]S{[MG]|[TS]}VPV 8 -1 18.594 0.0 0.0 1.6622 0.0 0.0 0.0 349.15922445268615 349.15922445268615 5.228787452803374 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.0 [VP]S{[MG]|[TS]}VPV 1.6622 - 78 1 1.48 33392.6 1.0 10719 5652 16372 HBL1_DMSO_200M_050219_1,16373 HBL1_DMSO_200M_050219_1,16373,PVSFRNTWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16374 79.452 21.0 1176500.0 25 0 297080.0 23996 LVVPVFTFLQF 11 46 655.3817727593439 1308.7489925854877 2 655.3825561404228 MULTI CID FTMS 0 0 0 16372 3151702.25 0.9778338530634813 1 -0.1278076171875 2 Unmodified _LVVPVFTFLQF_ ENSG00000167995|ENST00000378043|BEST1;ENST00000524877.5_1_11:61722897-61725974:+|nuORF;ENST00000529265.5_1_11:61717864-61725974:+|nuORF;nc|ENSG00000167995|O76090-3|BEST1;nc|ENSG00000167995|O76090-4|BEST1 1.0714618166137932 0.8700927088084459 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.48 30288.6 1.0 10720 5652 16372 HBL1_DMSO_200M_050219_1,16374 HBL1_DMSO_200M_050219_1,16374,LVVPVFTFLQF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16375 79.454 55.0 840580.0 25 0 81306.0 + 25354 NAPQIITI 8 82 435.2581079689603 868.5016630047206 2 435.2578918337822 MULTI CID FTMS 0 0 0 16372 1045030.0625 0.8744232084488608 -2 0.1279373168945312 3 Unmodified _NAPQIITI_ ENSG00000166348|ENST00000687698|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-4|USP54;nc|ENSG00000166348|Q70EL1-6|USP54 19.438996006549623 0.6237395211498085 3 T{I|L} 2 6 17.034 0.0 0.0 1.9613 0.0 0.0 636.3588540221019 0.0 636.3588540221019 0.0 7.356311906895856 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + T{I|L} 1.9613 + + 40 + 1 1.48 41483.8 1.0 10721 5652 16372 HBL1_DMSO_200M_050219_1,16375 HBL1_DMSO_200M_050219_1,16375,NAPQIITI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16376 79.456 106.0 290340.0 25 0 64225.0 12653 GVLERVERLKQ 11 66 663.8950121760205 1325.7754714188409 2 663.8967162966728 MULTI CID FTMS 0 0 0 16372 922059.0 0.8669913915238209 5 -0.4878921508789062 4 Unmodified _GVLERVERLKQ_ ENSG00000064932|ENST00000361757|SBNO2;nc|ENSG00000064932|Q9Y2G9-3|SBNO2 1.4819007175156935 0.86815623132643 3 C(Carbamidomethyl (C)) 1 11 2.7642 0.0 0.0 0.2085 0.0 0.0 1033.6699549166908 129.05622278385002 1162.7261777005408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.2085 - 6 + 1 1.48 36306.1 1.0 10722 5652 16372 HBL1_DMSO_200M_050219_1,16376 HBL1_DMSO_200M_050219_1,16376,GVLERVERLKQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16377 79.457 58.0 692730.0 25 0 59525.0 + 12841 GVVDPRAISVL 11 76 563.3352635352793 1124.6559741373585 2 563.3350707888603 MULTI CID FTMS 0 0 0 16372 814958.1875 0.1518973724040875 5 -0.4878921508789062 5 Unmodified _GVVDPRAISVL_ ENSG00000244687|ENST00000371674|UBE2V1;ENST00000483534.5_1_20:48699307-48713022:-|nuORF;nc|ENSG00000244687|Q13404-1|UBE2V1;nc|ENSG00000244687|Q13404-2|UBE2V1;nc|ENSG00000244687|Q13404-6|UBE2V1;nc|ENSG00000244687|Q13404-7|UBE2V1 26.268140514670165 0.4754186812857754 3 [Q{I|L}][VP]SVDRV{I|L} 10 7 + 38.306 0.0 0.0 3.406 3.406 77.402 0.0 0.0 0.0 2.7545373444029053 16.962724883926654 2.7545373444029053 6.989700043360188 0 0.535666875892183 0.0 0.805462187404089 0.0 [Q{I|L}][VP]SVDRV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDRV{I|L};[VP][Q{I|L}]SVDRV{I|L};[Q{I|L}][VP]SVD[VG]V{I|L};{I|L}{I|L}[NP]SVDRV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVD[VG]V{I|L};[VP][Q{I|L}]SVD[VG]V{I|L};{I|L}{I|L}[NP]SVD[VG]V{I|L};[RV][{M(Oxidation (M))|F}V]V[HK]Q{I|L};[{I|L}P][WK]VD[VG]V{I|L} 3.406;2.7845;2.603;2.5911;2.4155;1.9696;1.7881;1.6007;1.479;1.2749 -;-;-;-;-;-;-;-;-;- 158 1 1.48 35601.3 1.0 10723 5652 16372 HBL1_DMSO_200M_050219_1,16377 HBL1_DMSO_200M_050219_1,16377,GVVDPRAISVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16378 79.46 125.0 454920.0 25 0 23573.0 + 25110 MPYPAPNVPVV 11 101 592.312484973917 1182.610417014634 2 592.3116943240166 MULTI CID FTMS 0 0 0 16372 632720.25 0.269205171322419 5 -0.4878921508789062 6 Unmodified _MPYPAPNVPVV_ ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB 24.020572477871973 0.5281922720044371 3 [VP]{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[NP]V 8 7 32.637 0.0 0.0 2.7597 0.0 0.0 0.0 310.1760313245073 310.1760313245073 9.67352101606476 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.3494850021680094 [VP]{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[NP]V 2.7597 - 317 1 1.48 48477.7 1.0 10724 5652 16372 HBL1_DMSO_200M_050219_1,16378 HBL1_DMSO_200M_050219_1,16378,MPYPAPNVPVV False True MPYPAPNVPVV 79.459979 592.311694324017 64857348.0 16372.0 nc|ENSG00000133961|P49757-6|NUMB;;nc|ENSG00000133961|P49757-7|NUMB;;nc|ENSG00000133961|P49757-5|NUMB;;nc|ENSG00000133961|P49757-3|NUMB;;nc|ENSG00000133961|P49757-9|NUMB;;ENSG00000133961|ENST00000555238|NUMB;;nc|ENSG00000133961|P49757-8|NUMB;;nc|ENSG00000133961|P49757-2|NUMB;;nc|ENSG00000133961|P49757-4|NUMB 6.544560273488362 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16379 79.462 81.0 585960.0 25 0 73121.0 + 20448 LLIYPWTL 8 95 509.8014288962 1017.5883048592 2 509.8012267947197 MULTI CID FTMS 0 0 0 16372 546891.0 0.9337401119815092 1 -0.1278076171875 7 Unmodified _LLIYPWTL_ REV__ENSG00000139133|ENST00000266483|ALG10;REV__ENSG00000175548|ENST00000308742|ALG10B 14.581692164780916 0.6954967302934248 3 {I|L}{I|L}{[DS]|[MA]|[CV]|TT}H 5 -1 29.22 0.0 0.0 2.8715 0.0 0.0 0.0 449.2289522760376 449.2289522760376 14.783474859079387 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}{[DS]|[MA]|[CV]|TT}H 2.8715 - 104 + 1 1.48 43259.1 1.0 10725 5652 16372 HBL1_DMSO_200M_050219_1,16379 HBL1_DMSO_200M_050219_1,16379,LLIYPWTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16380 79.468 335.0 182110.0 25 0 21837.0 29295 QIHIKKCRSIQ 11 114 677.3950840275277 1352.7756151218553 2 677.3961669802666 MULTI CID FTMS 0 0 0 16372 536783.4375 0.6420090881833658 11 -0.94891357421875 8 Unmodified _QIHIKKCRSIQ_ ENST00000352689.10_1_7:131173684-131173906:+|nuORF 12.240655878213236 0.7805268987462184 3 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}SQ 5 8 22.263 0.0 0.0 1.6457 0.0 0.0 0.0 803.4689494326552 803.4689494326552 0.2308808725165789 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}SQ 1.6457 - 96 1 1.48 51692.7 1.0 10726 5652 16372 HBL1_DMSO_200M_050219_1,16380 HBL1_DMSO_200M_050219_1,16380,QIHIKKCRSIQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16381 79.472 209.0 1390800.0 25 0 198480.0 + 21702 LPLRVPGL 8 136 432.7867198579895 863.5588867827789 2 432.7868835330009 MULTI CID FTMS 0 0 0 16372 469850.28125 0.5750138445040378 5 -0.4878921508789062 9 Unmodified _LPLRVPGL_ REV__ENSG00000171714|ENST00000324559|ANO5 20.871210003555333 0.6025813472596342 3 {I|L}P 2 -1 37.065 0.0 0.0 4.2921 0.0 0.0 0.0 650.4014477560171 650.4014477560171 23.25257498915996 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 {I|L}P 4.2921 + + 288 + 1 1.48 227157.0 1.0 10727 5652 16372 HBL1_DMSO_200M_050219_1,16381 HBL1_DMSO_200M_050219_1,16381,LPLRVPGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16382 79.479 425.0 338470.0 25 0 26055.0 + 38329 TQLGPPYHIL 10 154 569.8167881914293 1137.6190234496585 2 569.8176757693291 MULTI CID FTMS 0 0 0 16372 352836.15625 0.1275891054661972 -5 0.3558883666992187 10 Unmodified _TQLGPPYHIL_ ENSG00000119616|ENST00000341162|FCF1 52.268347100219714 0.0668375294751462 3 [QT]QH{M(Oxidation (M))|F}MA{I|L} 8 7 48.767 0.0 0.0 4.2867 0.0 0.0 0.0 178.12644467452097 178.12644467452097 21.5910695087406 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.3054621874040891 0.7425526322920362 [QT]QH{M(Oxidation (M))|F}MA{I|L} 4.2867 - 4470 1 1.48 109935.1 1.0 10728 5652 16372 HBL1_DMSO_200M_050219_1,16382 HBL1_DMSO_200M_050219_1,16382,TQLGPPYHIL True True TQLGPPYHIL 79.479436 569.817675769329 40276880.0 16372.0 ENSG00000119616|ENST00000341162|FCF1 5.385570049285889 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16383 79.483 174.0 279520.0 25 0 32232.0 + -1 SYCKFAKDCV 10 78 407.5190566783977 1219.5353406353931 3 407.5192748904228 MULTI CID FTMS 0 0 0 16372 353620.65625 0.0995261053250321 5 -0.4878921508789062 11 Carbamidomethyl (C) _SYCKFAKDC(Carbamidomethyl (C))V_ REV__ENSG00000213793|ENST00000638862|ZNF888 6.1918466704503565 0.6979955778746556 3 [Y{I|L}][WQ]Y 5 -1 24.265 0.0 0.0 1.9897 0.0 0.0 0.0 463.16641908681817 463.16641908681817 2.124759215276626 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [Y{I|L}][WQ]Y 1.9897 - 257 1 1.48 43925.5 1.0 10729 5652 16372 HBL1_DMSO_200M_050219_1,16383 HBL1_DMSO_200M_050219_1,16383,SYCKFAKDCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16384 79.49 414.0 308520.0 25 0 26121.0 39887 VFLYIAWVQL 10 148 626.3609505499721 1250.7073481667442 2 627.3661376833916 MULTI CID FTMS 0 0 0 16372 311867.78125 0.1350364731402178 11 -0.94891357421875 12 Unmodified _VFLYIAWVQL_ ENST00000343638.9_1_17:42283687-42283852:-|nuORF 12.531546534597751 0.6372748319968624 3 {I|L}{[QV]|[N{I|L}]|[RA]|[KV]}S{[MG]|[TS]}VSAQ{I|L} 11 8 26.781 0.0 0.0 2.1413 0.0 0.0 119.07407576728671 0.0 119.07407576728671 0.0 14.791619589495731 0.0 0.0 0 0.1331596456423734 0.0 0.3494850021680094 0.3494850021680094 {I|L}{[QV]|[N{I|L}]|[RA]|[KV]}S{[MG]|[TS]}VSAQ{I|L} 2.1413 - 935 1 1.48 102739.8 1.0 10730 5652 16372 HBL1_DMSO_200M_050219_1,16384 HBL1_DMSO_200M_050219_1,16384,VFLYIAWVQL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16385 79.499 475.0 683920.0 25 0 65284.0 + 32052 RVLEELETL 9 251 551.311989644283 1100.609426355366 2 551.3129150271416 MULTI CID FTMS 0 0 0 16372 263271.78125 0.0806347153730498 -2 0.1279373168945312 13 Unmodified _RVLEELETL_ ENSG00000043143|ENST00000681547|JADE2;nc|ENSG00000043143|Q9NQC1-2|JADE2;nc|ENSG00000043143|Q9NQC1-3|JADE2;nc|ENSG00000043143|Q9NQC1|JADE2 60.07390631473393 0.0260411565414776 3 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}ET{I|L} 9 4 + 75.719 0.0 0.0 6.8798 6.8798 87.776 0.0 0.0 0.0 10.819718394557327 13.815305503646371 10.819718394557327 6.63438158281501 0 0.5 1.6989700043360187 1.064751517103779 0.7218487496163564 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}E[RV]{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}D[R{I|L}]{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}WVV{I|L}ET{I|L};[{I|L}T][RN]AA{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}[RV]E{I|L}TE{I|L};[{I|L}T]AAQAA{I|L}ET{I|L};[Q{I|L}][KQ]E{I|L}ET{I|L};[{I|L}T]AA[RN]{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}E[RV]{I|L}TE{I|L} 6.8798;6.277;6.1727;5.9336;5.8967;5.8744;5.8591;5.5588;5.41;5.2716 -;-;-;-;-;-;-;-;-;- 11804 1 1.48 246392.5 1.0 10731 5652 16372 HBL1_DMSO_200M_050219_1,16385 HBL1_DMSO_200M_050219_1,16385,RVLEELETL True True RVLEELETL 79.498623 551.312915027142 21002094.0 16372.0 nc|ENSG00000043143|Q9NQC1-3|JADE2;;nc|ENSG00000043143|Q9NQC1-2|JADE2;;nc|ENSG00000043143|Q9NQC1|JADE2;;ENSG00000043143|ENST00000681547|JADE2 5.133334954579671 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16386 79.511 703.0 259330.0 25 0 24284.0 21167 LPAYPASL 8 195 416.2340420304462 830.4535311276924 2 416.2344543337822 MULTI CID FTMS 0 0 0 16372 263099.375 0.3932668769027656 5 -0.4878921508789062 14 Unmodified _LPAYPASL_ ENSG00000132692|ENST00000329117|BCAN;nc|ENSG00000132692|Q96GW7-2|BCAN 36.46614268402704 0.2934124525509074 3 {[TV]|[{I|L}S]}MPAS{I|L}{I|L} 8 4 + 45.882 0.0 0.0 5.525 5.525 74.558 0.0 0.0 0.0 0.2802872360024366 12.492822134202015 0.2802872360024366 0.2802872360024366 0 0.3807196863200844 1.0969100130080565 0.8252574989159953 0.0 {[TV]|[{I|L}S]}MPAS{I|L}{I|L};[{I|L}V]SCPS{I|L}{I|L};{[TV]|[{I|L}S]}MPA{I|L}S{I|L};[{I|L}V]SCP{I|L}S{I|L};{[TV]|[{I|L}S]}MAPS{I|L}{I|L};{[TV]|[{I|L}S]}VCPS{I|L}{I|L};{[TV]|[{I|L}S]}MAP{I|L}S{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}{I|L};{[TV]|[{I|L}S]}VCP{I|L}S{I|L};[PS]P{M(Oxidation (M))|F}A{I|L}S{I|L} 5.525;5.4912;5.2578;5.2241;5.1625;4.9167;4.8953;4.6531;4.6495;4.386 -;-;-;-;-;-;-;-;-;- 701 1 1.48 140198.4 1.0 10732 5652 16372 HBL1_DMSO_200M_050219_1,16386 HBL1_DMSO_200M_050219_1,16386,LPAYPASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16387 79.524 777.0 510280.0 25 0 45678.0 + 22537 LPWKFEHI 8 250 357.1992607308699 1068.57595279281 3 357.5330993533134 MULTI CID FTMS 0 0 0 16372 209870.65625 0.8945755047476355 1 -0.1278076171875 15 Unmodified _LPWKFEHI_ ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;nc|ENSG00000068878|Q14997-3|PSME4 19.256988751693697 0.6264283240490721 3 {I|L}PWK{M(Oxidation (M))|F}EH{I|L} 8 0 + 46.253 0.0 0.0 4.3285 4.3285 73.854 0.0 0.0 0.0 22.430380486862944 2.218487496163561 2.218487496163561 2.218487496163561 0 0.0744570122855722 0.6020599913279624 0.3807196863200844 0.0 + + {I|L}PWK{M(Oxidation (M))|F}EH{I|L};{I|L}PWK{M(Oxidation (M))|F}E{I|L}H;{I|L}{I|L}PW{[DS]|[MA]|[CV]|TT}[EP]{I|L};{I|L}{I|L}PWYQH{I|L};{I|L}{I|L}PWYQ{I|L}H;{I|L}{I|L}PW{[DS]|[MA]|[CV]|TT}{[QN]|[E{I|L}]|[KN]}P;{I|L}PW{I|L}{[DS]|[MA]|[CV]|TT}[EP]{I|L};{I|L}PW{I|L}[YQ]H{I|L};{I|L}P{I|L}WYQH{I|L};{I|L}{I|L}{[MG]|[TS]}{I|L}KG[NS]H 4.3285;4.1209;3.4874;3.2722;3.0646;3.0501;3.0312;3.0273;2.949;2.8973 +;-;-;-;-;-;-;-;-;- + 742 + 1 1.48 323139.6 1.0 10733 5652 16372 HBL1_DMSO_200M_050219_1,16387 HBL1_DMSO_200M_050219_1,16387,LPWKFEHI False True LPWKFEHI 79.524246 357.533099353313 1428160.0 16372.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4;;nc|ENSG00000068878|Q14997-3|PSME4 5.414448261260986 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16388 79.535 507.0 506200.0 25 0 50382.0 43053 VYHSSFHRY 9 201 598.2855159537862 1194.5564789743723 2 598.2870971560478 MULTI CID FTMS 0 0 0 16372 194863.15625 0.3003212418912911 -2 0.1279373168945312 16 Unmodified _VYHSSFHRY_ ENST00000278612.8_1_11:108058836-108062880:-|nuORF;ENST00000610253.5_1_11:108058836-108093299:-|nuORF 30.63653989081413 0.1413794767160703 3 YVPQYTYVY 9 8 + 89.396 0.0 0.0 7.4836 7.4836 83.469 0.0 0.0 0.0 65.32760017977509 14.749321833847873 14.749321833847873 1.989700043360188 0 1.6593793813122062 2.0 0.7742275032520141 0.4247425010840047 YVPQYTYVY;VYPQYTYVY;YVYPQTYVY;VYYPQTYVY;YVPYQTYVY;VYPYQTYVY;YVPQYV[YT]Y;VYPQYV[YT]Y;YVYPQV[YT]Y;YVP[AG]YTYVY 7.4836;7.317;7.3053;7.1387;7.0127;6.8462;6.5466;6.38;6.3683;6.3572 -;-;-;-;-;-;-;-;-;- 11230 + 1 1.48 190196.3 1.0 10734 5652 16372 HBL1_DMSO_200M_050219_1,16388 HBL1_DMSO_200M_050219_1,16388,VYHSSFHRY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16389 79.544 511.0 184190.0 25 0 30050.0 -1 YDCQFNEDGSM 11 100 691.2380019344969 0 691.2390014529228 PEAK CID FTMS 0 0 0 16372 198847.28125 1.0 0 0.0 17 Carbamidomethyl (C),Oxidation (M) _YDC(Carbamidomethyl (C))QFNEDGSM(Oxidation (M))_ ENSG00000134759|ENST00000358232|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 1.3295316138638542 0.4761840153648598 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.50633 0.0 0.0 1105.297462753956 125.0726259820922 1230.3700887360485 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.50633 + + 21 + 1 1.48 73298.9 1.0 10735 5652 16372 HBL1_DMSO_200M_050219_1,16389 HBL1_DMSO_200M_050219_1,16389,YDCQFNEDGSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16390 79.553 500.0 54377.0 25 0 3425.0 -1 0 75 759.6790773512039 2276.015402653812 3 759.6793090701103 MULTI CID FTMS 0 0 0 16372 116143.7109375 0.2991927564834511 4 -0.3880538940429687 18 3 {I|L} 1 -1 3.9794 0.0 0.0 0.17484 0.0 0.0 1721.6699569524428 438.23630701236567 2159.9062639648087 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.17484 - 90 + 1 1.48 31792.3 1.0 10736 5652 16372 HBL1_DMSO_200M_050219_1,16390 HBL1_DMSO_200M_050219_1,16390, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16391 79.562 524.0 66128.0 25 0 4958.1 -1 EIFLVCFFFFL 11 84 741.3815575193555 0 741.0474731326103 PEAK CID FTMS 0 0 0 -1 0 19 Carbamidomethyl (C) _EIFLVC(Carbamidomethyl (C))FFFFL_ ENST00000370562.1_1_20:60963217-60963421:+|nuORF 9.38312468134398 0.4559597037863106 3 {I|L} 1 -1 5.4846 0.0 0.0 0.37039 0.0 0.0 1091.5523168435952 273.0887240045532 1364.6410408481484 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.37039 + + 10 + 1 1.48 34162.6 1.0 10737 5652 16372 HBL1_DMSO_200M_050219_1,16391 HBL1_DMSO_200M_050219_1,16391,EIFLVCFFFFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16392 79.575 679.0 387360.0 25 0 34592.0 + 8590 GVVTEVVMI 9 216 481.7682727239696 961.5219925147392 2 481.7660400271416 MULTI CID FTMS 0 0 0 16372 162541.203125 0.203336790485625 -6 0.4707870483398437 20 Unmodified _ETVVRVYP_ ENSG00000071626|ENST00000233078|DAZAP1;nc|ENSG00000071626|Q96EP5-2|DAZAP1;ENST00000589484.5_1_19:1417247-1428848:+|nuORF;ENST00000586579.5_1_19:1407772-1428848:+|nuORF 38.15118350030904 0.2652218139009398 3 {[QN]|[E{I|L}]|[KN]}SVR 5 5 43.147 0.0 0.0 4.4874 0.0 0.0 0.0 374.1791940130393 374.1791940130393 24.35742515412224 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.8882104921644451 0.0 {[QN]|[E{I|L}]|[KN]}SVR 4.4874 - 2931 1 1.48 197682.8 1.0 10738 5652 16372 HBL1_DMSO_200M_050219_1,16392 HBL1_DMSO_200M_050219_1,16392,ETVVRVYP False False GVVTEVVMI 79.574731 481.766040027142 1869813.0 16372.0 ENSG00000071626|ENST00000233078|DAZAP1;;nc|ENSG00000071626|Q96EP5-2|DAZAP1;;ENST00000589484.5_1_19:1417247-1428848:+|nuORF;;ENST00000586579.5_1_19:1407772-1428848:+|nuORF 3.854775826136271 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16394 79.58 74.0 1337500.0 25 0 86737.0 + 18000 KSADEVLFTGV 11 121 583.3079031239291 1164.6012533146582 2 583.3090698122978 MULTI CID FTMS 0 0 0 16393 1146030.375 0.7166502647111471 1 -0.1474533081054687 1 Unmodified _KSADEVLFTGV_ ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF 84.5221896805406 0.0042935016478757 3 {[DA]|[EG]}[KS]EV{I|L}{M(Oxidation (M))|F}TGV 11 4 + 95.482 0.0 0.0 8.1987 8.1987 84.79 0.0 0.0 0.0 1.9615105298465068 10.070623213458036 1.9615105298465068 1.9615105298465068 0 1.7302046884880935 1.3010299956639813 2.221848749616356 0.0 {[DA]|[EG]}[KS]EV{I|L}{M(Oxidation (M))|F}TGV;[VG]T[SG]EV{I|L}{M(Oxidation (M))|F}TGV;{[SA]|[TG]}V[SG]EV{I|L}{M(Oxidation (M))|F}TGV;{[SA]|[TG]}WWV{I|L}{M(Oxidation (M))|F}TGV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[SA]|[TG]}KV{I|L}{M(Oxidation (M))|F}TGV;[VG]M[VS]GV{I|L}{M(Oxidation (M))|F}TGV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KT]GV{I|L}{M(Oxidation (M))|F}TGV;[VG]M[DV]K{I|L}{M(Oxidation (M))|F}TGV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{[SA]|[TG]}K{I|L}{M(Oxidation (M))|F}TGV;{[WT]|[RM]}WGV{I|L}{M(Oxidation (M))|F}TGV 8.1987;8.0302;7.9066;7.7349;7.6477;7.532;7.306;7.2874;7.2194;7.219 -;-;-;-;-;-;-;-;-;- 2554 1 1.481 80643.4 1.0 10739 5653 16393 HBL1_DMSO_200M_050219_1,16394 HBL1_DMSO_200M_050219_1,16394,KSADEVLFTGV True True KSADEVLFTGV 79.579731 583.309069812298 30679338.0 16393.0 ENST00000490175.5_1_20:17923003-17949420:-|nuORF;;ENSG00000089006|ENST00000377759|SNX5 8.395602862040201 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16395 79.586 324.0 316430.0 25 0 45331.0 + 22161 LPPSHPLHL 9 123 337.5308668922506 1009.5707712769516 3 337.5309020876884 MULTI CID FTMS 0 0 0 16393 167032.21875 0.1778376333524977 2 -0.176025390625 2 Unmodified _LPPSHPLHL_ REV__ENST00000592414.1_1_19:3053234-3053555:-|nuORF 23.78978130925829 0.2284941198415988 3 TPH{I|L}{I|L} 5 -1 34.17 0.0 0.0 3.3846 0.0 0.0 430.2286244123063 0.0 430.2286244123063 0.0 24.63728376185263 0.0 0.0 0 0.3252574989159953 0.0 0.3494850021680094 0.0 TPH{I|L}{I|L} 3.3846 - 117 1 1.481 87299.1 1.0 10740 5653 16393 HBL1_DMSO_200M_050219_1,16395 HBL1_DMSO_200M_050219_1,16395,LPPSHPLHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16396 79.587 19.0 5906300.0 25 0 734470.0 + 2813 ATYVFLHTV 9 111 525.7845202789968 1049.5544876247934 2 525.7848388552666 MULTI CID FTMS 0 0 0 16393 2367286.0 0.3311123836176378 -1 0.1278076171875 3 Unmodified _ATYVFLHTV_ ENSG00000123353|ENST00000243045|ORMDL2 88.90359156742426 0.0153595091083554 3 [TA]YV{M(Oxidation (M))|F}{I|L}HTV 9 0 + 77.624 0.0 0.0 7.3959 7.3959 81.35 0.0 0.0 0.0 22.632192780232785 0.8715017571890087 0.8715017571890087 0.8715017571890087 0 1.0189301784845295 1.6989700043360187 2.394599018282542 0.0 + + [TA]YV{M(Oxidation (M))|F}{I|L}HTV;[TA]YV{M(Oxidation (M))|F}{I|L}HS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}{M(Oxidation (M))|F}VY[PG];[YV]{M(Oxidation (M))|F}{I|L}HTV[TA];{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{I|L}{M(Oxidation (M))|F}VY[PG];[YV][HV]VVY[TA];[YV][HV]VYV[TA];[HT]V{I|L}{M(Oxidation (M))|F}VY[TA];[HT]V{I|L}{M(Oxidation (M))|F}YV[TA];{[TV]|[{I|L}S]}H{I|L}{M(Oxidation (M))|F}VY[TA] 7.3959;7.3128;4.0692;3.553;3.1919;2.9624;2.9624;2.8706;2.8706;2.7333 +;-;-;-;-;-;-;-;-;- + 591 + 1 1.481 86836.4 1.0 10741 5653 16393 HBL1_DMSO_200M_050219_1,16396 HBL1_DMSO_200M_050219_1,16396,ATYVFLHTV True True ATYVFLHTV 79.586789 525.784838855267 53437744.0 16393.0 ENSG00000123353|ENST00000243045|ORMDL2 7.8978681564331055 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16397 79.588 19.0 3582000.0 25 0 634860.0 + 39030 TVTITGIVKV 10 90 515.8292053433445 1029.6438577534889 2 515.8294555544853 MULTI CID FTMS 0 0 0 16393 1901644.5 0.8425754264258586 -1 0.1278076171875 4 Unmodified _TVTITGIVKV_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 28.49450938151212 0.328477364964909 3 {[TV]|[{I|L}S]}TA{I|L}V 6 5 60.851 0.0 0.0 5.9099 0.0 0.0 0.0 442.2675509510077 442.2675509510077 28.155980316589364 0.0 0.0 0.0 0 1.0 2.0 1.6861818737241734 0.0 {[TV]|[{I|L}S]}TA{I|L}V 5.9099 - 530 1 1.481 53916.3 1.0 10742 5653 16393 HBL1_DMSO_200M_050219_1,16397 HBL1_DMSO_200M_050219_1,16397,TVTITGIVKV False True TVTITGIVKV 79.587968 515.829455554485 45245064.0 16393.0 ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;nc|ENSG00000125885|Q9UJA3-2|MCM8 5.049349387486775 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16398 79.589 34.0 1551500.0 25 0 104910.0 37171 TIDNNILKI 9 95 522.3082017446841 1042.601850556168 2 522.3091918826103 MULTI CID FTMS 0 0 0 16393 1019641.5625 1.0 0 0.0 5 Unmodified _TIDNNILKI_ ENST00000440082.5_1_7:30536264-30536414:-|nuORF 19.256988751693697 0.3154191944385105 3 {[QN]|[E{I|L}]|[KN]}VDT{I|L}{I|L}K{I|L} 9 4 + 52.348 0.0 0.0 5.0209 5.0209 78.091 0.0 0.0 0.0 7.147642715192504 3.38818556553381 3.38818556553381 3.38818556553381 0 1.0994850021680094 0.0 0.0 0.1923877696554315 {[QN]|[E{I|L}]|[KN]}VDT{I|L}{I|L}K{I|L};{[QN]|[E{I|L}]|[KN]}VDT{I|L}{I|L}{I|L}K 5.0209;4.6959 -;- 277 + 1 1.481 49047.0 1.0 10743 5653 16393 HBL1_DMSO_200M_050219_1,16398 HBL1_DMSO_200M_050219_1,16398,TIDNNILKI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16399 79.591 72.0 1277300.0 25 0 139410.0 + 34342 SLSPLKVMV 9 115 487.29033256558233 972.5661121979648 2 487.2910949587822 MULTI CID FTMS 0 0 0 16393 993146.25 0.415506941615333 -1 0.1278076171875 6 Unmodified _SLSPLKVMV_ REV__ENST00000437679.2_2:110663464-110663506:+|nuORF 53.832793166522166 0.0319663582346103 3 {[TV]|[{I|L}S]}VQVVVMV 9 -1 + 84.139 0.0 0.0 8.6512 8.6512 95.498 0.0 0.0 0.0 20.67615968740268 16.478174818886373 16.478174818886373 11.703103093438967 0 1.1677353201839438 2.0 1.6598043275316798 0.0 {[TV]|[{I|L}S]}VQVVVMV;{[TV]|[{I|L}S]}[TP]KVVMV;{[TV]|[{I|L}S]}[TP]VKVMV;{[TV]|[{I|L}S]}[PS]{I|L}KVMV;{[QN]|[E{I|L}]|[KN]}A{I|L}AKVMV;{[QN]|[E{I|L}]|[KN]}[KG]VVVMV;{[QN]|[E{I|L}]|[KN]}AA{I|L}KVMV;{[TV]|[{I|L}S]}[PS]K{I|L}VMV;{[QN]|[E{I|L}]|[KN]}AAK{I|L}VMV;VVD{I|L}AKVMV 8.6512;7.4479;6.7469;6.7343;6.5253;6.2518;6.2031;6.0626;5.5315;5.3649 -;-;-;+;-;-;-;-;-;- + 730 1 1.481 74779.2 1.0 10744 5653 16393 HBL1_DMSO_200M_050219_1,16399 HBL1_DMSO_200M_050219_1,16399,SLSPLKVMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16400 79.597 350.0 470290.0 25 0 52350.0 + 45574 YVEDELDDIT 10 140 606.2687525502638 1210.5229521673275 2 606.2686035037041 MULTI CID FTMS 0 0 0 16393 506985.375 0.8909738189807941 -3 0.2557449340820312 7 Unmodified _YVEDELDDIT_ REV__CON__Q3SX28;REV__ENSG00000198467|ENST00000645482|TPM2 20.453626601364224 0.5043500229302764 3 YVY 3 -1 50.005 0.0 0.0 4.1309 0.0 0.0 0.0 782.3067426644344 782.3067426644344 37.24087460279588 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 YVY 4.1309 - 399 + 1 1.481 121514.4 1.0 10745 5653 16393 HBL1_DMSO_200M_050219_1,16400 HBL1_DMSO_200M_050219_1,16400,YVEDELDDIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16401 79.599 70.0 1299400.0 25 0 128120.0 + + 44787 IMLEALERV 9 110 545.303449547845 0 545.3038207888603 PEAK CID FTMS 0 0 0 16393 479334.625 0.6864030275160714 -4 0.3790664672851562 8 Unmodified _YPLVGLLEW_ nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG 30.22481116460888 0.1097735003385577 3 {M(Oxidation (M))|F}{I|L}EA{I|L}[PG]Y 8 -1 34.615 0.0 0.0 3.1798 0.0 0.0 113.088636300965 82.06701074771718 195.15564704868217 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.3252574989159953 0.0 {M(Oxidation (M))|F}{I|L}EA{I|L}[PG]Y 3.1798 - 895 + 1 1.481 75944.1 1.0 10746 5653 16393 HBL1_DMSO_200M_050219_1,16401 HBL1_DMSO_200M_050219_1,16401,YPLVGLLEW False False IMLEALERV 79.598827 545.30382078886 4129447.25 16393.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 3.55303963025411 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16402 79.607 433.0 528510.0 25 0 59965.0 + 5034 DGWTPLHV 8 140 924.4550981160368 923.4478216494368 1 924.4583618044852 MULTI CID FTMS 0 0 0 16393 274507.875 0.2220301588380027 3 -0.2602462768554687 9 Unmodified _DGWTPLHV_ ENSG00000183475|ENST00000332783|ASB7;nc|ENSG00000183475|Q9H672-2|ASB7 42.09456458481378 0.1992492688217789 3 M{M(Oxidation (M))|F}{I|L}WNT{I|L} 7 7 + 30.218 0.0 0.0 3.2723 3.2723 67.924 0.0 0.0 0.0 -3.960828060918832 0.6358396464032801 -3.960828060918832 0.3959062302381255 0 0.1435078169319297 0.0 0.8243923658886186 0.2614393726401688 M{M(Oxidation (M))|F}{I|L}WNT{I|L};DY{I|L}WNT{I|L};{[DA]|[EG]}WSP{I|L}HV;DGWTP{I|L}HV;[QP]V[HA]{I|L}EM;[QP]VNK[HC]V;MEPK[PS]HV;[QP]V{I|L}E[HC]V;[{I|L}T][H{I|L}]Y{M(Oxidation (M))|F}M;[QP][HA]V{I|L}EM 3.2723;3.2294;3.0576;3.0081;2.9124;2.8537;2.8484;2.7341;2.7182;2.5864 -;-;-;+;-;-;-;-;-;- + 2294 + 1 1.481 153490.9 1.0 10747 5653 16393 HBL1_DMSO_200M_050219_1,16402 HBL1_DMSO_200M_050219_1,16402,DGWTPLHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16403 79.614 441.0 192160.0 25 0 17162.0 37649 TLLSKRLVDWL 11 151 672.4093738849436 0 672.4097778201103 PEAK CID FTMS 0 0 0 16393 246549.6875 1.0 0 0.0 10 Unmodified _TLLSKRLVDWL_ ENSG00000242802|ENST00000649063|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;nc|ENSG00000242802|O43299-3|AP5Z1 5.296884461304476 0.47618401536486 3 {I|L}{I|L}N 3 9 8.8123 0.0 0.0 0.65626 0.0 0.0 791.4965909321935 208.07329736881096 999.5698883010044 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}N 0.65626 - 151 + 1 1.481 72082.7 1.0 10748 5653 16393 HBL1_DMSO_200M_050219_1,16403 HBL1_DMSO_200M_050219_1,16403,TLLSKRLVDWL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16404 79.624 549.0 773220.0 25 0 72963.0 + 948 AFLEAADNL 9 232 482.24222460542114 962.4698962776424 2 482.2428771853447 MULTI CID FTMS 0 0 0 16393 264701.15625 0.2310787881816854 -1 0.1278076171875 11 Unmodified _AFLEAADNL_ ENSG00000173113|ENST00000544844|TRMT112 36.04419817259434 0.0971720506436186 3 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}AA 6 6 35.406 0.0 0.0 3.6787 0.0 0.0 0.0 357.13958128019584 357.13958128019584 14.387233705948248 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}AA 3.6787 - 1930 1 1.481 317898.4 1.0 10749 5653 16393 HBL1_DMSO_200M_050219_1,16404 HBL1_DMSO_200M_050219_1,16404,AFLEAADNL True True AFLEAADNL 79.624052 482.242877185345 7395742.0 16393.0 ENSG00000173113|ENST00000544844|TRMT112 4.976598898569743 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16405 79.635 626.0 615050.0 25 0 49801.0 + 2834 AVAGILKQL 9 243 456.797639817837 0 456.7974120974541 PEAK CID FTMS 0 0 0 16393 225149.203125 1.0 0 0.0 12 Unmodified _AVAGILKQL_ ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;nc|ENSG00000068878|Q14997-3|PSME4 81.86404211737425 0.0126442402618485 3 {I|L}Q{I|L}KST 6 7 33.121 0.0 0.0 3.6333 0.0 0.0 170.10549917013788 68.05144678287343 238.1569459530113 0.0 0.0 0.0 0.0 0 0.6421590589602533 0.0 1.6351518780601924 0.6549471895720985 {I|L}Q{I|L}KST 3.6333 - 2047 + 1 1.481 288570.8 1.0 10750 5653 16393 HBL1_DMSO_200M_050219_1,16405 HBL1_DMSO_200M_050219_1,16405,AVAGILKQL True True AVAGILKQL 79.634964 456.797412097454 2340706.75 16393.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4;;nc|ENSG00000068878|Q14997-3|PSME4 3.2444955905278525 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16406 79.647 703.0 259120.0 25 0 24622.0 -1 VYPVRCEWC 9 190 404.5147704710495 1210.5224820133485 3 404.5150024294853 MULTI CID FTMS 0 0 0 16393 213232.5 0.9503880802862484 -3 0.2557449340820312 13 Carbamidomethyl (C) _VYPVRC(Carbamidomethyl (C))EWC_ ENSG00000007384|ENST00000262316|RHBDF1 18.373094154950223 0.3393451798331396 3 VYPE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D 7 -1 67.039 0.0 0.0 5.538 0.0 0.0 0.0 347.14990116170026 347.14990116170026 55.25591749341344 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 1.2302046884880935 VYPE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D 5.538 - 170 + 1 1.481 140348.6 1.0 10751 5653 16393 HBL1_DMSO_200M_050219_1,16406 HBL1_DMSO_200M_050219_1,16406,VYPVRCEWC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16407 79.657 477.0 555890.0 25 0 39204.0 -1 DMSDQDCCVS 10 221 608.6981020220207 1215.3816511108414 2 608.6978637576103 MULTI CID FTMS 0 0 0 16393 205504.09375 0.1153847678998109 -2 0.1843643188476562 14 2 Carbamidomethyl (C) _DMSDQDC(Carbamidomethyl (C))C(Carbamidomethyl (C))VS_ nc|ENSG00000058600|Q9NVU0-2|POLR3E 6.723162845929126 0.6955379296933136 3 {[QG]|[NA]}WD 4 -1 32.12 0.0 0.0 2.6428 0.0 0.0 0.0 726.1719454400999 726.1719454400999 15.04187958849927 0.0 0.0 0.0 0 0.7742275032520141 0.7695510786217261 0.3494850021680094 0.0 {[QG]|[NA]}WD 2.6428 - 612 + 1 1.481 187494.8 1.0 10752 5653 16393 HBL1_DMSO_200M_050219_1,16407 HBL1_DMSO_200M_050219_1,16407,DMSDQDCCVS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16408 79.671 800.0 365920.0 25 0 17613.0 + 42134 VRSFMSCTGLG 11 226 386.51928844473525 1156.5360359344058 3 386.5189697146416 MULTI CID FTMS 0 0 0 16393 192605.03125 0.0649852036841531 -3 0.2557449340820312 15 Unmodified _VRSFMSCTGLG_ REV__ENSG00000163393|ENST00000369503|SLC22A15 10.799506525563784 0.8105043987015127 3 VP 2 -1 25.507 0.0 0.0 2.2055 0.0 0.0 0.0 957.3949828115558 957.3949828115558 6.915052013945967 0.0 0.0 0.0 0 0.1237125054200235 0.5686362358410126 0.0 0.0 VP 2.2055 - 429 + 1 1.481 240389.7 0.959999978542328 10753 5653 16393 HBL1_DMSO_200M_050219_1,16408 HBL1_DMSO_200M_050219_1,16408,VRSFMSCTGLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16409 79.684 800.0 484690.0 25 0 67108.0 + + 23742 FGIPRLERI 9 224 367.5575416026834 1099.6507954082504 3 367.5573913455009 MULTI CID FTMS 0 0 0 16393 184935.28125 0.4578987318265875 -4 0.3790664672851562 16 Unmodified _LTWLRLLW_ nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;ENST00000473333.1_1_7:74159164-74160345:+|nuORF;nc|ENSG00000263001|P78347-4|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;ENSG00000263001|ENST00000573035|GTF2I 20.41453444215458 0.6093278397249439 3 {M(Oxidation (M))|F}{I|L}G{I|L}RPE{I|L}R 9 -1 + 67.711 0.0 0.0 6.1575 6.1575 83.815 0.0 0.0 0.0 18.07102957240136 4.820166614818923 4.820166614818923 4.820166614818923 0 0.0 0.721246399047171 0.7302046884880937 0.8494850021680094 {M(Oxidation (M))|F}{I|L}G{I|L}RPE{I|L}R;{M(Oxidation (M))|F}{I|L}G{I|L}RP[{I|L}V]W;{M(Oxidation (M))|F}G{I|L}{I|L}RPE{I|L}R;{M(Oxidation (M))|F}{I|L}G{I|L}RPER{I|L};{M(Oxidation (M))|F}{I|L}G{I|L}RPRE{I|L};{M(Oxidation (M))|F}G{I|L}{I|L}RPRE{I|L};{M(Oxidation (M))|F}G{I|L}{I|L}RPER{I|L};{M(Oxidation (M))|F}G{I|L}{I|L}RP[{I|L}V]W;{M(Oxidation (M))|F}{I|L}G[RP]{I|L}E{I|L}R;{M(Oxidation (M))|F}{I|L}G{I|L}VGP[{I|L}V]W 6.1575;5.7192;5.6101;5.5698;5.3681;5.2754;5.0224;4.6086;4.5168;4.3987 -;-;-;-;-;-;-;-;-;- 659 + 1 1.481 304496.5 0.9200000166893004 10754 5653 16393 HBL1_DMSO_200M_050219_1,16409 HBL1_DMSO_200M_050219_1,16409,LTWLRLLW False False FGIPRLERI 79.684414 367.557391345501 4073246.0 16393.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;ENST00000473333.1_1_7:74159164-74160345:+|nuORF;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 3.272685408592224 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16410 79.695 528.0 371920.0 25 0 21302.0 + 30622 RFIPYTEEF 9 233 601.298269098321 1200.581985263442 2 601.2989379763603 MULTI CID FTMS 0 0 0 16393 164145.546875 0.3331835611621043 1 -0.1474533081054687 17 Unmodified _RFIPYTEEF_ ENSG00000107651|ENST00000369075|SEC23IP;nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP 32.78568957990786 0.1150597335874693 3 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}[HT]TEE{M(Oxidation (M))|F} 10 5 + 39.294 0.0 0.0 3.2729 3.2729 68.685 0.0 0.0 0.0 0.791812460476244 15.026975159433526 0.791812460476244 0.791812460476244 0 0.5994850021680094 1.3010299956639813 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}[HT]TEE{M(Oxidation (M))|F};[EP]V{I|L}[HT]TEE{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TEE{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}P{I|L}[{I|L}P]EEE{M(Oxidation (M))|F};[EP]V{I|L}[{I|L}P]EEE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[VP][HT]TEE{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][{I|L}A]{I|L}W{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[{I|L}T]P[YV]W{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[VP][{I|L}P]EEE{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}W{M(Oxidation (M))|F}E{M(Oxidation (M))|F} 3.2729;3.2069;2.9414;2.8755;2.8095;2.7999;2.4836;2.4268;2.4024;2.3942 -;-;+;-;-;-;-;-;-;- + 3057 1 1.481 139220.2 1.0 10755 5653 16393 HBL1_DMSO_200M_050219_1,16410 HBL1_DMSO_200M_050219_1,16410,RFIPYTEEF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16411 79.706 630.0 509470.0 25 0 37070.0 + -1 LGACMCALL 9 230 476.2266267161039 0 476.2269470095634 PEAK CID FTMS 0 0 0 16393 133163.484375 1.0 0 0.0 18 Carbamidomethyl (C) _LGACMC(Carbamidomethyl (C))ALL_ REV__ENSG00000103742|ENST00000352385|IGDCC4;REV__ENST00000559327.1_1_15:65676349-65688574:-|nuORF;REV__nc|ENSG00000103742|Q8TDY8-2|IGDCC4 28.17323086031832 0.1269780855172776 3 VP{I|L}E 4 -1 15.918 0.0 0.0 1.6748 0.0 0.0 300.0983817507641 209.057428228186 509.15580997895006 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VP{I|L}E 1.6748 - 376 + 1 1.481 242814.6 1.0 10756 5653 16393 HBL1_DMSO_200M_050219_1,16411 HBL1_DMSO_200M_050219_1,16411,LGACMCALL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16412 79.714 473.0 394090.0 25 0 22704.0 + 31921 RVADEMDVML 10 229 589.7797090331113 1177.5448651330223 2 589.7798339724541 MULTI CID FTMS 0 0 0 16393 125985.6640625 0.9587162322920812 -2 0.1843643188476562 19 Unmodified _RVADEMDVML_ ENSG00000109606|ENST00000336812|DHX15 27.22323531849824 0.3570408936368626 3 [{I|L}T][QP]MMDVM{I|L} 10 5 + 54.724 0.0 0.0 4.6473 4.6473 78.062 0.0 0.0 0.0 4.352394434997521 4.352394434997521 4.352394434997521 4.352394434997521 0 0.75 0.4436974992327127 0.1421590589602531 0.5501648626366046 [{I|L}T][QP]MMDVM{I|L};[YV]VDME{I|L}{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}V[DP]DVM{I|L};[YQ]PT[DP]DVM{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}EMDVM{I|L};[YV]VD[DP]TPC(Carbamidomethyl (C)){I|L};[YV]VDME{I|L}Y{M(Oxidation (M))|F};[YV]VDMM[QP]PV;[Q{I|L}][TP]MMDVM{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]EMDVM{I|L} 4.6473;4.2777;4.1708;3.9868;3.98;3.8634;3.8156;3.7618;3.7006;3.6596 -;-;-;-;-;-;-;-;-;- 3844 1 1.481 137487.6 1.0 10757 5653 16393 HBL1_DMSO_200M_050219_1,16412 HBL1_DMSO_200M_050219_1,16412,RVADEMDVML False True RVADEMDVML 79.714255 589.779833972454 1543056.375 16393.0 ENSG00000109606|ENST00000336812|DHX15 4.42120083173116 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16413 79.722 451.0 107980.0 25 0 4571.4 + 31718 RRRLQIKILHK 11 98 730.9882690310478 0 730.9882690310478 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _RRRLQIKILHK_ L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|6|1|sense 0.0 0.4761840153648598 3 AAD 3 11 14.002 0.0 0.0 0.95905 0.0 0.0 1030.7747730701049 169.06276880435783 1199.8375418744629 0.0 0.0 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 AAD 0.95905 - 319 + 1 1.481 47768.9 1.0 10758 5653 16393 HBL1_DMSO_200M_050219_1,16413 HBL1_DMSO_200M_050219_1,16413,RRRLQIKILHK False True False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 16415 79.726 0.84 54718000.0 25 0 5135500.0 23707 LTTRPSESKT 10 78 560.3015923871525 1118.5886318411049 2 560.3021728396416 MULTI CID FTMS 0 0 0 16414 72680328.0 0.3117765769371893 -3 0.331817626953125 1 Unmodified _LTTRPSESKT_ ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1 13.042465956692816 0.6287021003332052 3 [VP]SGMV{I|L}T 8 8 35.645 0.0 0.0 3.1866 0.0 0.0 0.0 331.1520833394049 331.1520833394049 20.027515650137104 0.0 0.0 0.0 0 0.0 0.744727494896694 0.5 0.0 [VP]SGMV{I|L}T 3.1866 - 267 1 1.481 43310.7 1.0 10759 5654 16414 HBL1_DMSO_200M_050219_1,16415 HBL1_DMSO_200M_050219_1,16415,LTTRPSESKT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16416 79.728 2.0 21951000.0 25 0 1771500.0 + 43132 VYPEYVIQY 9 59 587.2950573805119 1172.5755618278238 2 587.2952148318291 MULTI CID FTMS 0 0 0 16414 27188122.0 0.976876431147372 -1 0.1474533081054687 2 Unmodified _VYPEYVIQY_ ENSG00000059378|ENST00000263549|PARP12 36.04419817259434 0.0971720506436186 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{I|L}Q 6 5 29.75 0.0 0.0 2.5371 0.0 0.0 0.0 440.1809444784676 440.1809444784676 10.261398462779113 0.0 0.0 0.0 0 0.0 0.958607314841775 0.3252574989159953 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{I|L}Q 2.5371 - 183 1 1.481 44398.1 1.0 10760 5654 16414 HBL1_DMSO_200M_050219_1,16416 HBL1_DMSO_200M_050219_1,16416,VYPEYVIQY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16417 79.729 2.7 21575000.0 25 0 2683400.0 + 4343 DASLVFKV 8 85 439.752570102468 877.4905872717361 2 439.7528259158134 MULTI CID FTMS 0 0 0 16414 21896300.0 1.0 0 0.0 3 Unmodified _DASLVFKV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602816-23603164:-|nuORF 46.020951573049366 0.1579632664462935 3 {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV 8 0 + 66.826 0.0 0.0 7.6156 7.6156 96.869 0.0 0.0 0.0 47.41644881804882 8.920373528534725 8.920373528534725 66.82644865094241 0 1.0994850021680094 2.0 0.0 0.0 + + {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV 7.6156 + + 65 + 1 1.481 52025.8 1.0 10761 5654 16414 HBL1_DMSO_200M_050219_1,16417 HBL1_DMSO_200M_050219_1,16417,DASLVFKV False True DASLVFKV 79.728724 439.752825915813 788353680.0 16414.0 ENST00000444025.1_1_7:23602816-23603164:-|nuORF;;ENSG00000164163|ENST00000296577|ABCE1 7.816141605377197 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16418 79.73 5.7 8869200.0 25 0 719200.0 + 31294 RLYPEGLAQL 10 60 580.3269061775125 1158.6392594218248 2 580.3273803591728 MULTI CID FTMS 0 0 0 16414 10390556.0 1.0 0 0.0 4 Unmodified _RLYPEGLAQL_ ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF 33.82136114134338 0.222812100547209 3 [R{I|L}]Y[EP]G{I|L}AQ{I|L} 10 0 + 53.505 0.0 0.0 4.6179 4.6179 82.509 0.0 0.0 0.0 4.259687322722812 43.047444008242906 4.259687322722812 9.164539485499256 0 0.7302046884880937 0.0 0.3807196863200844 0.0 + + [R{I|L}]Y[EP]G{I|L}AQ{I|L};[R{I|L}]Y[EP]G{I|L}A[AG]{I|L};[VP][HV][EP]G{I|L}AQ{I|L};[R{I|L}]Y[EP][Q{I|L}]Q{I|L} 4.6179;3.8269;3.8269;2.0384 +;-;-;- + 72 1 1.481 42900.0 1.0 10762 5654 16414 HBL1_DMSO_200M_050219_1,16418 HBL1_DMSO_200M_050219_1,16418,RLYPEGLAQL False True RLYPEGLAQL 79.729903 580.327380359173 355599000.0 16414.0 ENST00000563305.1_1_16:67472744-67473248:-|nuORF;;ENSG00000159720|ENST00000290949|ATP6V0D1 8.379032770792643 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16419 79.731 8.1 6797400.0 25 0 956640.0 20410 LLHPPPLSL 9 82 493.8060379259144 985.5975229186288 2 493.8054077029228 MULTI CID FTMS 0 0 0 16414 7298721.5 1.0 0 0.0 5 Unmodified _LLHPPPLSL_ ENST00000583260.1_1_17:62009328-62009508:-|nuORF 24.67388899826682 0.2172451872415813 3 {I|L}{I|L}VTAW[KG]V 9 7 + 58.478 0.0 0.0 5.9332 5.9332 79.064 0.0 0.0 0.0 42.86074950468563 2.0065945054641787 2.0065945054641787 2.059319556497244 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {I|L}{I|L}VTAW[KG]V;{I|L}{I|L}VTA[RN]S{I|L};{I|L}{I|L}VTA[RN]TV 5.9332;5.7243;5.1723 -;-;- 114 + 1 1.481 47098.4 1.0 10763 5654 16414 HBL1_DMSO_200M_050219_1,16419 HBL1_DMSO_200M_050219_1,16419,LLHPPPLSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16420 79.732 6.8 6515700.0 25 0 972750.0 + 34898 SQIEADFRL 9 60 539.7800980862982 1077.5456432393962 2 539.7801391482353 MULTI CID FTMS 0 0 0 16414 5153669.5 0.2006521379077064 -3 0.331817626953125 6 Unmodified _SQIEADFRL_ ENSG00000198900|ENST00000361337|TOP1 41.95555342248728 0.0647214845423414 3 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}] 9 2 + 60.569 0.0 0.0 5.621 5.621 90.842 0.0 0.0 0.0 56.58924985774085 4.137342758552691 4.137342758552691 60.56864994446123 0 1.0 1.0457574905606752 0.4247425010840047 0.0 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}] 5.621 - 54 + 1 1.481 42490.3 1.0 10764 5654 16414 HBL1_DMSO_200M_050219_1,16420 HBL1_DMSO_200M_050219_1,16420,SQIEADFRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16421 79.733 7.7 6059500.0 25 0 559650.0 + 44697 YPFQIHSI 8 83 502.7638151577249 0 502.7639953494072 PEAK CID FTMS 0 0 0 16414 5063323.0 1.0 0 0.0 7 Unmodified _YPFQIHSI_ ENSG00000101290|ENST00000460006|CDS2;ENSG00000163624|ENST00000295887|CDS1;ENST00000379070.3_1_20:5157275-5170877:+|nuORF 71.13359017698441 0.0023104561541172 3 P{M(Oxidation (M))|F}Q{I|L}H 5 3 32.053 0.0 0.0 3.194 0.0 0.0 163.0616753740149 215.1042574518188 378.1659328258337 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.3054621874040891 + P{M(Oxidation (M))|F}Q{I|L}H 3.194 + + 63 + 1 1.481 41654.9 1.0 10765 5654 16414 HBL1_DMSO_200M_050219_1,16421 HBL1_DMSO_200M_050219_1,16421,YPFQIHSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16422 79.735 13.0 4142100.0 25 0 591730.0 + 40924 VLSQLLVEL 9 85 507.3156971454326 1012.6168413576652 2 507.3159973025322 MULTI CID FTMS 0 0 0 16414 4643338.0 0.7248268046822932 1 -0.0285720825195312 8 Unmodified _VLSQLLVEL_ REV__ENSG00000065413|ENST00000282272|ANKRD44;REV__nc|ENSG00000065413|Q8N8A2-2|ANKRD44;REV__nc|ENSG00000065413|Q8N8A2-4|ANKRD44 45.69961567697781 0.0497987121815769 3 [{I|L}V]NT{I|L}{I|L}VE{I|L} 9 -1 + 58.056 0.0 0.0 5.7333 5.7333 86.885 0.0 0.0 0.0 3.868865538569466 21.89728522514727 3.868865538569466 9.208187539523747 0 1.1677353201839438 2.0 0.6747425010840047 0.0 [{I|L}V]NT{I|L}{I|L}VE{I|L};[{I|L}V]GGT{I|L}{I|L}VE{I|L};[{I|L}V][KA]E{I|L}VE{I|L};[{I|L}V][KA]V{[QN]|[E{I|L}]|[KN]}E{I|L};{[VA]|[{I|L}G]}[VG]T{I|L}{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}[KG]{I|L}{I|L}VE{I|L};[K{I|L}]{[DA]|[EG]}{I|L}{I|L}VE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}A]{I|L}{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]{I|L}{I|L}VE{I|L};[K{I|L}]{[VA]|[{I|L}G]}E{I|L}VE{I|L} 5.7333;4.8239;3.5604;2.1024;2.043;1.71;1.4127;0.97885;0.94153;0.79422 -;-;-;-;-;-;-;-;-;- 659 1 1.481 47597.8 1.0 10766 5654 16414 HBL1_DMSO_200M_050219_1,16422 HBL1_DMSO_200M_050219_1,16422,VLSQLLVEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16423 79.736 19.0 2736000.0 25 0 228740.0 + 13623 HPPSHWPLI 9 72 542.2903820269429 1082.5662111206857 2 542.2908813357353 MULTI CID FTMS 0 0 0 16414 2860475.75 0.2361316958205037 7 -0.5418167114257812 9 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 60.38955033654506 0.025866396858536 3 [{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L} 9 5 + 45.427 0.0 0.0 4.1962 4.1962 76.773 0.0 0.0 0.0 4.431890546242343 8.969975784476162 4.431890546242343 4.431890546242343 0 1.0074908058443608 2.0 0.0 0.0 [{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]HWP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]WHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]WPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PPH{I|L}{I|L} 4.1962;3.7868;3.4563;3.3904;2.6716;2.3276;1.6088 -;+;-;-;-;-;- + 253 1 1.481 45753.2 1.0 10767 5654 16414 HBL1_DMSO_200M_050219_1,16423 HBL1_DMSO_200M_050219_1,16423,HPPSHWPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16424 79.737 22.0 2855200.0 25 0 448920.0 + 13670 HPYRLILTV 9 83 556.3345340563499 1110.6545151794996 2 556.3352538943291 MULTI CID FTMS 0 0 0 16414 2428468.25 0.1272637629292188 3 -0.2126312255859375 10 Unmodified _HPYRLILTV_ ENSG00000105397|ENST00000525621|TYK2 31.26834338654808 0.1333407332142048 3 {I|L}HTV 4 6 30.962 0.0 0.0 2.7877 0.0 0.0 642.3850456502064 0.0 642.3850456502064 0.0 3.41251590079672 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {I|L}HTV 2.7877 - 143 1 1.481 54552.6 1.0 10768 5654 16414 HBL1_DMSO_200M_050219_1,16424 HBL1_DMSO_200M_050219_1,16424,HPYRLILTV False True HPYRLILTV 79.736974 556.335253894329 398635056.0 16414.0 ENSG00000105397|ENST00000525621|TYK2 5.158929030100505 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16425 79.738 27.0 830910.0 25 0 248360.0 + 17777 KQHKKHLPFF 10 38 655.3817727593439 1308.7489925854877 2 655.3826171755791 MULTI CID FTMS 0 0 0 16414 1967053.5 0.6102897261589372 3 -0.2126312255859375 11 Unmodified _KQHKKHLPFF_ REV__ENST00000598473.1_1_19:51742709-51742940:+|nuORF 0.4583401331227399 0.7245164002484112 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.481 31986.7 1.0 10769 5654 16414 HBL1_DMSO_200M_050219_1,16425 HBL1_DMSO_200M_050219_1,16425,KQHKKHLPFF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16426 79.74 66.0 559840.0 25 0 73835.0 15102 IMQPPLDLKQI 11 68 648.3743617341019 1294.7341705350036 2 648.3744384646416 MULTI CID FTMS 0 0 0 16414 1566033.375 0.5923505290048411 3 -0.2126312255859375 12 Unmodified _IMQPPLDLKQI_ nc|ENSG00000161642|Q96PM9-3|ZNF385A;nc|ENSG00000161642|Q96PM9|ZNF385A 5.731851221503515 0.8481046878870278 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q 3 8 19.181 0.0 0.0 1.4815 0.0 0.0 0.0 919.5317834102568 919.5317834102568 17.922152515121223 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q 1.4815 + + 28 1 1.481 37808.3 1.0 10770 5654 16414 HBL1_DMSO_200M_050219_1,16426 HBL1_DMSO_200M_050219_1,16426,IMQPPLDLKQI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16427 79.741 33.0 1784800.0 25 0 122200.0 + 44928 YPPWPGKIV 9 89 528.7980392882323 1055.5815256432645 2 528.7976562380791 MULTI CID FTMS 0 0 0 16414 1442178.875 0.0577284932194245 -32 2.5588912963867188 13 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 42.09456458481378 0.0639583784996157 3 YPPWV[{I|L}T]N 8 4 68.294 0.0 0.0 6.4698 0.0 0.0 0.0 82.06702600650624 82.06702600650624 46.55787502935297 0.0 0.0 0.0 0 0.805462187404089 2.0 0.8494850021680094 0.2059771852360797 YPPWV[{I|L}T]N 6.4698 - 374 + 1 1.481 53651.3 1.0 10771 5654 16414 HBL1_DMSO_200M_050219_1,16427 HBL1_DMSO_200M_050219_1,16427,YPPWPGKIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16428 79.742 39.0 1682200.0 25 0 202110.0 + 24874 MPMQDIKMI 9 95 553.7739640129141 1105.533375092628 2 553.7744018435478 MULTI CID FTMS 0 0 0 16414 1339379.375 0.1483165442045254 -3 0.331817626953125 14 Unmodified _MPMQDIKMI_ ENSG00000185686|ENST00000405655|PRAME 59.36838082759317 0.0264317782606298 3 MPMQD{I|L}KM{I|L} 9 0 + 89.351 0.0 0.0 8.0822 8.0822 93.291 0.0 0.0 0.0 56.49797211252192 12.98332479720628 12.98332479720628 9.208187539523747 0 2.1549471895720984 2.0 0.0 0.0 + + MPMQD{I|L}KM{I|L};MPM[AG]D{I|L}KM{I|L};MPMQD{I|L}MK{I|L};MPM[AG]D{I|L}MK{I|L};[YV]K{I|L}DQ[DP]E;{NN|[MP]|[D{I|L}]|[EV]}QD{I|L}K[{M(Oxidation (M))|F}V]E;MPM[{M(Oxidation (M))|F}E]KK[VP];[YV]K{I|L}D[AG][DP]E;{NN|[MP]|[D{I|L}]|[EV]}QD{I|L}[Q{I|L}][YV];{NN|[MP]|[D{I|L}]|[EV]}[AG]D{I|L}K[{M(Oxidation (M))|F}V]E 8.0822;7.2493;6.9602;6.1273;3.6736;3.3973;2.898;2.8407;2.6774;2.5644 +;-;-;-;-;-;-;-;-;- + 892 + 1 1.481 56053.8 1.0 10772 5654 16414 HBL1_DMSO_200M_050219_1,16428 HBL1_DMSO_200M_050219_1,16428,MPMQDIKMI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16429 79.743 48.0 1435400.0 25 0 218220.0 + 5032 DGWTPLHV 8 90 462.7321557219596 923.4497585107192 2 462.7323791384697 MULTI CID FTMS 0 0 0 16414 1324977.625 0.1089168683923335 6 -0.481964111328125 15 Unmodified _DGWTPLHV_ ENSG00000183475|ENST00000332783|ASB7;nc|ENSG00000183475|Q9H672-2|ASB7 42.96799951952854 0.1846367511955703 3 {[QD]|[EN]|[WG]|[KD]|[RS]}DTP{I|L}VH 8 4 {[QD]|[EN]|[WG]|[KD]|[RS]}D + + 28.206 17.676 4.9357 3.0544 3.0544 50.299 0.0 0.0 0.0 0.0 10.530097250275356 0.0 0.0 0 0.3252574989159953 0.0 0.3807196863200844 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}DTP{I|L}VH 3.0544 - 137 + 1 1.481 58969.5 1.0 10773 5654 16414 HBL1_DMSO_200M_050219_1,16429 HBL1_DMSO_200M_050219_1,16429,DGWTPLHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16430 79.745 45.0 998620.0 25 0 102310.0 + 25652 NFVKWKVRGK 10 70 421.2555858067264 1260.7449280203791 3 421.2557861208916 MULTI CID FTMS 0 0 0 16414 1202154.875 0.9114851189559456 1 -0.0285720825195312 16 Unmodified _NFVKWKVRGK_ REV__ENSG00000037637|ENST00000375592|FBXO42 10.073929032068715 0.6785112666868882 3 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 -1 + 87.894 0.0 0.0 6.9716 6.9716 90.052 0.0 0.0 0.0 68.13045199250286 18.279550148593486 18.279550148593486 9.164539485499247 0 0.3494850021680094 2.0 0.0 0.3252574989159953 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR 6.9716;6.2447 -;- 105 + 1 1.481 45829.5 1.0 10774 5654 16414 HBL1_DMSO_200M_050219_1,16430 HBL1_DMSO_200M_050219_1,16430,NFVKWKVRGK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16431 79.747 96.0 1080800.0 25 0 186020.0 + 12647 GVLDTLTKV 9 119 473.284341856439 944.554130779678 2 473.2844116091728 MULTI CID FTMS 0 0 0 16414 1203943.625 0.3020733703833801 2 -0.11279296875 17 Unmodified _GVLDTLTKV_ ENSG00000214114|ENST00000397572|MYCBP;ENST00000495043.5_1_1:39330344-39338774:-|nuORF 45.69961567697781 0.0497987121815769 3 [VG]{I|L}DT{I|L}TKV 9 0 + 80.064 0.0 0.0 8.4764 8.4764 96.206 0.0 0.0 0.0 29.481048713086423 11.962724883926654 11.962724883926654 16.003602064500683 0 0.6549471895720985 2.0 1.0941876774005248 0.0 + + [VG]{I|L}DT{I|L}TKV;[VG]{I|L}DT{I|L}[KS]{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}[KS]{I|L}R;[VG]{I|L}[{M(Oxidation (M))|F}V]AA{I|L}R;R[{M(Oxidation (M))|F}V][VP]TKV;[VG]{I|L}[{M(Oxidation (M))|F}V][RV]R;R[VS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PKV;[{I|L}T]D{I|L}[KS]{I|L}GV;R[VS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KPV;[{I|L}T]T[WR]{I|L}R 8.4764;6.7821;3.1148;2.6486;2.4783;2.4679;2.1596;2.1417;2.0245;1.9921 +;-;-;-;-;-;-;-;-;- + 839 + 1 1.481 84777.8 1.0 10775 5654 16414 HBL1_DMSO_200M_050219_1,16431 HBL1_DMSO_200M_050219_1,16431,GVLDTLTKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16432 79.748 64.0 1287300.0 25 0 127870.0 + 28205 PQGQLLTL 8 107 435.2581079689603 868.5016630047206 2 435.2586242556572 MULTI CID FTMS 0 0 0 16414 1195107.875 1.0 0 0.0 18 Unmodified _PQGQLLTL_ ENSG00000174197|ENST00000703841|MGA;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA 40.44857923139169 0.2267865117615937 3 [QP]{I|L}{I|L} 4 4 21.726 0.0 0.0 2.5016 0.0 0.0 0.0 414.1994223643488 414.1994223643488 1.5502448676914329 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 [QP]{I|L}{I|L} 2.5016 - 94 1 1.481 68827.6 1.0 10776 5654 16414 HBL1_DMSO_200M_050219_1,16432 HBL1_DMSO_200M_050219_1,16432,PQGQLLTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16433 79.75 54.0 1261300.0 25 0 204020.0 -1 LSIRLVMVCLT 11 68 632.3613328012864 1262.708112669373 2 632.3616821169853 MULTI CID FTMS 0 0 0 16414 1086028.5 0.5162859336097958 2 -0.11279296875 19 Oxidation (M) _LSIRLVM(Oxidation (M))VCLT_ ENSG00000186335|ENST00000335244|SLC36A2;nc|ENSG00000186335|Q495M3-2|SLC36A2;nc|ENSG00000186335|Q495M3-3|SLC36A2 5.731851221503515 0.8481046878870278 3 G 1 -1 1.9897 0.0 0.0 0.15757 0.0 0.0 892.4870871340196 310.1780794733032 1202.6651666073228 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.15757 - 7 + 1 1.481 57058.2 1.0 10777 5654 16414 HBL1_DMSO_200M_050219_1,16433 HBL1_DMSO_200M_050219_1,16433,LSIRLVMVCLT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16434 79.751 18.0 2003900.0 25 0 143480.0 1455 ALEVFKQQV 9 75 531.3029715831099 1060.5913902330196 2 531.3036376833916 MULTI CID FTMS 0 0 0 16414 1129938.125 0.3640956347940141 13 -0.94134521484375 20 Unmodified _ALEVFKQQV_ ENSG00000152229|ENST00000409746|PSTPIP2;ENST00000587042.1_1_18:43591047-43652154:-|nuORF;nc|ENSG00000152229|Q9H939-2|PSTPIP2 13.50788311687929 0.4710407108020397 3 [{I|L}A][TA]PT 6 7 20.29 0.0 0.0 1.9131 0.0 0.0 0.0 503.26873333288216 503.26873333288216 6.795606106491903 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A][TA]PT 1.9131 - 145 1 1.481 34764.3 1.0 10778 5654 16414 HBL1_DMSO_200M_050219_1,16434 HBL1_DMSO_200M_050219_1,16434,ALEVFKQQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16436 79.755 18.0 2687400.0 25 0 273520.0 + 37464 TLERVLEEL 9 77 551.311989644283 1100.609426355366 2 551.3120605349541 MULTI CID FTMS 0 0 0 16435 2548973.5 0.7806979984336873 1 -0.0842208862304687 1 Unmodified _TLERVLEEL_ ENSG00000043143|ENST00000681547|JADE2;nc|ENSG00000043143|Q9NQC1-2|JADE2;nc|ENSG00000043143|Q9NQC1-3|JADE2;nc|ENSG00000043143|Q9NQC1|JADE2 39.94969957227396 0.0757326808254658 3 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}ET{I|L} 9 3 + 58.082 0.0 0.0 5.2773 5.2773 83.697 0.0 0.0 0.0 11.45119965945284 15.969100130080562 11.45119965945284 8.010299956639813 0 0.5 1.6989700043360187 0.5 0.0 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}[RV]E{I|L}TE{I|L};{[QN]|[E{I|L}]|[KN]}T[RV]{I|L}EE{I|L};[{I|L}T]E[RV]{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}[RV]T{I|L}EE{I|L};[VP]T{[TV]|[{I|L}S]}E{I|L}ET{I|L};[VP]T{[TV]|[{I|L}S]}E{I|L}TE{I|L};{[QN]|[E{I|L}]|[KN]}T[RV]{I|L}W{[QG]|[NA]};[{I|L}T]E[RV]{I|L}W{[QG]|[NA]};{[ET]|[MV]}{I|L}[RV]{I|L}EE{I|L} 5.2773;4.5495;4.1367;4.012;3.8424;3.5593;2.8315;2.5258;2.4011;2.332 -;-;-;+;-;-;-;-;-;- + 309 1 1.468 42099.1 1.0 10779 5655 16435 HBL1_DMSO_200M_050219_1,16436 HBL1_DMSO_200M_050219_1,16436,TLERVLEEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16437 79.756 22.0 2105700.0 25 0 277150.0 + 28681 PVPTAETESLP 11 71 570.7944749602749 1139.5743969873497 2 571.2930786013603 MULTI CID FTMS 0 0 0 16435 1715882.875 0.3686934425995263 -4 0.3603897094726562 2 Unmodified _PVPTAETESLP_ REV__ENSG00000047849|ENST00000683076|MAP4;REV__nc|ENSG00000047849|P27816-6|MAP4;REV__nc|ENSG00000047849|P27816|MAP4 6.2057823575117 0.8458686499021061 3 [VP]S{[MG]|[TS]}[RN]PV[PS] 11 -1 + 24.938 0.0 0.0 2.1884 2.1884 80.826 0.0 0.0 0.0 2.719710455794811 11.5487980323444 2.719710455794811 22.223571942248345 0 0.0 1.0457574905606752 0.0 0.0 [VP]S{[MG]|[TS]}[RN]PV[PS];[{I|L}V]CQ[QA]VP[WP] 2.1884;0.23821 -;- 59 1 1.468 42899.3 1.0 10780 5655 16435 HBL1_DMSO_200M_050219_1,16437 HBL1_DMSO_200M_050219_1,16437,PVPTAETESLP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16438 79.757 20.0 1797900.0 25 0 137410.0 + 10032 FPNIHPPQI 9 72 531.7899207646715 1061.5652885961429 2 531.7902099490166 MULTI CID FTMS 0 0 0 16435 1157859.875 0.4141044948203403 -7 0.6117401123046875 3 Unmodified _FPNIHPPQI_ ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-3|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 25.399314129420983 0.2080152500878129 3 {M(Oxidation (M))|F}P 2 7 23.271 0.0 0.0 2.1922 0.0 0.0 0.0 814.4238375299436 814.4238375299436 2.54554718523508 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {M(Oxidation (M))|F}P 2.1922 + + 110 + 1 1.468 35002.9 1.0 10781 5655 16435 HBL1_DMSO_200M_050219_1,16438 HBL1_DMSO_200M_050219_1,16438,FPNIHPPQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16439 79.761 219.0 646790.0 25 0 52859.0 + + -1 GVYDIDNKTIEL 12 133 690.3556276225287 1378.6967023118573 2 690.3561889529228 MULTI CID FTMS 0 0 0 16435 950019.6875 1.0 0 0.0 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SLYEVDTIREL_ ENSG00000085719|ENST00000517490|CPNE3 34.93206674587334 0.2904649469012649 3 [VG]YD{I|L}[NS]RT{I|L}E{I|L} 12 -1 + 87.601 0.0 0.0 6.3539 6.3539 77.491 0.0 0.0 0.0 14.022686588723076 15.10666445614629 14.022686588723076 0.4402281476392033 0 2.466615272907445 1.6989700043360187 0.805462187404089 0.6109243748081782 [VG]YD{I|L}[NS]RT{I|L}E{I|L};[VG]YD{I|L}[NS]TR{I|L}E{I|L};[VG]YD{[DA]|[EG]}KRT{I|L}E{I|L};[VG]YD{[DA]|[EG]}KTR{I|L}E{I|L};[VG]YD{I|L}[NS][VG]T{I|L}E{I|L};[VG]YD{I|L}[NS]T[VG]{I|L}E{I|L};[VG]YD{I|L}[NS]T{I|L}RE{I|L};[VG]YD{[DA]|[EG]}K[VG]T{I|L}E{I|L};[VG]YD{[DA]|[EG]}KT[VG]{I|L}E{I|L};[VG]YD[WK][VG]T{I|L}E{I|L} 6.3539;6.322;6.2096;6.1776;5.694;5.6621;5.5772;5.5497;5.5177;5.5046 -;-;-;-;-;-;-;-;-;- 11474 1 1.468 111251.2 1.0 10782 5655 16435 HBL1_DMSO_200M_050219_1,16439 HBL1_DMSO_200M_050219_1,16439,SLYEVDTIREL False False GVYDIDNKTIEL 79.761455 690.356188952923 7784234.0 16435.0 ENSG00000085719|ENST00000517490|CPNE3 6.968521277109782 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16440 79.763 73.0 1473800.0 25 0 192360.0 + 4628 DAYVLPKL 8 103 459.7681889261383 917.5218249190766 2 459.7687866091728 MULTI CID FTMS 0 0 0 16435 986866.1875 0.0216839033677317 -5 0.4317703247070312 5 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 39.957323273325 0.2350051964751539 3 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 + 68.383 0.0 0.0 7.4531 7.4531 91.053 0.0 0.0 0.0 27.990308374501645 11.8943306386236 11.8943306386236 9.018637558036673 0 1.1989700043360187 1.6989700043360187 0.0 0.2059771852360797 + + {[DA]|[EG]}YV{I|L}PK{I|L};{[DA]|[EG]}Y{I|L}VPK{I|L};{[DA]|[EG]}YV{I|L}{I|L}[KP];{[DA]|[EG]}Y{I|L}V{I|L}[KP];{[DA]|[EG]}Y{I|L}[K{I|L}]PV;[{I|L}P]KGY{I|L}EV;[KP]{I|L}GY{I|L}EV;[{I|L}T][K{I|L}]{I|L}CEV;[{I|L}T][K{I|L}]C{I|L}EV 7.4531;6.4701;6.0331;5.0501;4.2902;3.329;3.3097;2.6663;1.8753 +;-;-;-;-;-;-;-;- + 213 + 1 1.468 88066.1 1.0 10783 5655 16435 HBL1_DMSO_200M_050219_1,16440 HBL1_DMSO_200M_050219_1,16440,DAYVLPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16441 79.768 233.0 680670.0 25 0 60800.0 -1 TGRDLDDVCL 10 185 582.2727026372729 1162.5308523413455 2 582.2735473513603 MULTI CID FTMS 0 0 0 16435 897451.125 1.0 0 0.0 6 Carbamidomethyl (C) _TGRDLDDVC(Carbamidomethyl (C))L_ ENST00000527245.5_1_11:124746542-124746584:+|nuORF 16.149105407346934 0.5765757077271437 3 {[TV]|[{I|L}S]}C(Carbamidomethyl (C))Y{I|L}PR 7 -1 30.513 0.0 0.0 2.6247 0.0 0.0 0.0 270.05231165214576 270.05231165214576 6.075863694820711 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0994850021680094 0.0 {[TV]|[{I|L}S]}C(Carbamidomethyl (C))Y{I|L}PR 2.6247 - 5788 1 1.468 122429.3 1.0 10784 5655 16435 HBL1_DMSO_200M_050219_1,16441 HBL1_DMSO_200M_050219_1,16441,TGRDLDDVCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16442 79.769 86.0 859310.0 25 0 80106.0 + 10521 FVDPAQITM 9 102 511.2545661416019 1020.4945793500038 2 511.2551757693291 MULTI CID FTMS 0 0 0 16435 853498.6875 0.1492088574954446 -5 0.4317703247070312 7 Unmodified _FVDPAQITM_ ENSG00000167325|ENST00000300738|RRM1 29.081581746732265 0.1611639662936252 3 [{M(Oxidation (M))|F}V]DPAQ{I|L}[MT] 9 0 + 42.787 0.0 0.0 4.1928 4.1928 70.748 0.0 0.0 0.0 0.5745441982190798 6.478174818886366 0.5745441982190798 0.5745441982190798 0 0.4247425010840047 1.5228787452803376 0.0 0.0 + + [{M(Oxidation (M))|F}V]DPAQ{I|L}[MT];[{I|L}T]{M(Oxidation (M))|F}PAQ{I|L}[MT];{[{M(Oxidation (M))|F}C]|[YS]}{I|L}QAP{M(Oxidation (M))|F}PV;[{M(Oxidation (M))|F}V]DPA[AG]{I|L}[MT];[{I|L}T]{M(Oxidation (M))|F}PA[AG]{I|L}[MT];[PA]Q{I|L}T{M(Oxidation (M))|F}{I|L}[MT];{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{M(Oxidation (M))|F}V[YV]M;[PA]QDV{M(Oxidation (M))|F}{I|L}[MT];[{I|L}T]Q[PA]{M(Oxidation (M))|F}{I|L}[MT];[QA]P{I|L}T{M(Oxidation (M))|F}{I|L}[MT] 4.1928;4.1365;3.558;3.2905;3.2342;3.1328;3.0576;3.0284;2.8566;2.7763 +;-;-;-;-;-;-;-;-;- + 813 1 1.468 60370.6 1.0 10785 5655 16435 HBL1_DMSO_200M_050219_1,16442 HBL1_DMSO_200M_050219_1,16442,FVDPAQITM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16443 79.772 135.0 845060.0 25 0 95256.0 + 19165 LEDPVAPPL 9 104 475.7634460410517 949.5123391489036 2 475.7636901736259 MULTI CID FTMS 0 0 0 16435 750550.4375 0.5443485522199071 -2 0.176025390625 8 Unmodified _LEDPVAPPL_ REV__ENSG00000178685|ENST00000313028|PARP10;REV__ENST00000528580.1_1_8:145060208-145060527:-|nuORF 21.74664581756881 0.2544899275067181 3 [DP]E{I|L}AV 6 -1 28.475 0.0 0.0 2.9989 0.0 0.0 0.0 322.176986936266 322.176986936266 4.522404211576223 0.0 0.0 0.0 0 0.5 0.8860566476931632 0.0 0.0 [DP]E{I|L}AV 2.9989 - 209 1 1.468 89258.3 1.0 10786 5655 16435 HBL1_DMSO_200M_050219_1,16443 HBL1_DMSO_200M_050219_1,16443,LEDPVAPPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16444 79.775 132.0 697760.0 25 0 80121.0 38517 TSNRDPPI 8 118 450.2343639511818 898.4541749691637 2 450.2346984744072 MULTI CID FTMS 0 0 0 16435 625894.625 0.6384693588308433 -2 0.176025390625 9 Unmodified _TSNRDPPI_ ENSG00000172404|ENST00000307221|DNAJB7 24.67388899826682 0.525179942228231 3 PP{I|L} 3 5 27.435 0.0 0.0 3.0536 0.0 0.0 573.252943467692 0.0 573.252943467692 0.0 11.475540908469595 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + PP{I|L} 3.0536 + + 229 + 1 1.468 72995.8 1.0 10787 5655 16435 HBL1_DMSO_200M_050219_1,16444 HBL1_DMSO_200M_050219_1,16444,TSNRDPPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16445 79.778 133.0 722500.0 25 0 86875.0 + 31158 RLPDTALPTL 10 102 548.8215311604566 1095.6285093877132 2 548.8221313357353 MULTI CID FTMS 0 0 0 16435 611730.875 0.7875480797122061 3 -0.2549285888671875 10 Unmodified _RLPDTALPTL_ ENSG00000262246|ENST00000251166|CORO7;ENST00000575531.5_1_16:4407102-4412712:-|nuORF;ENST00000575714.5_1_16:4408319-4455566:-|nuORF;nc|ENSG00000262246|P57737-2|CORO7;nc|ENSG00000262246|P57737-3|CORO7;nc|ENSG00000262246|P57737-4|CORO7 43.9818466556824 0.1155196613165264 3 [TP]{I|L}[RD]A{I|L}PT{I|L} 10 4 + 59.06 0.0 0.0 5.3905 5.3905 88.014 0.0 0.0 0.0 15.532760461370998 18.533110421804167 15.532760461370998 15.532760461370998 0 1.5172203223519531 1.6989700043360187 0.3252574989159953 0.0 [TP]{I|L}[RD]A{I|L}PT{I|L};[{I|L}P][RD]TA{I|L}PT{I|L};[TP]{I|L}[WK]{I|L}[EP]{I|L};[{I|L}T]P[RD]A{I|L}PT{I|L};[{I|L}P]T[RD]A{I|L}PT{I|L};[KP]QQTA{I|L}PT{I|L};[R{I|L}][DP]TA{I|L}PT{I|L};[{I|L}P]K[WE]{I|L}PT{I|L};[KP]{I|L}[WE]{I|L}PT{I|L};[{I|L}T]P[WK]{I|L}[EP]{I|L} 5.3905;3.9728;3.6598;3.498;3.4012;3.3432;3.2903;2.919;2.2894;1.7673 -;-;-;-;-;-;+;-;-;- + 371 1 1.468 83295.7 1.0 10788 5655 16435 HBL1_DMSO_200M_050219_1,16445 HBL1_DMSO_200M_050219_1,16445,RLPDTALPTL True True RLPDTALPTL 79.777603 548.822131335735 22739210.0 16435.0 nc|ENSG00000262246|P57737-2|CORO7;;nc|ENSG00000262246|P57737-4|CORO7;;ENST00000575531.5_1_16:4407102-4412712:-|nuORF;;ENSG00000262246|ENST00000251166|CORO7;;nc|ENSG00000262246|P57737-3|CORO7;;ENST00000575714.5_1_16:4408319-4455566:-|nuORF 7.709987322489421 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16446 79.783 273.0 411150.0 25 0 27392.0 + 9324 FIILWFATQI 10 132 626.3613996006916 1250.708246268183 2 626.3616210818291 MULTI CID FTMS 0 0 0 16435 607603.1875 0.288034853883283 -8 0.6597213745117188 11 Unmodified _FIILWFATQI_ REV__ENST00000394235.6_1_4:140058958-140060593:-|nuORF 7.289230182591677 0.6929195370588109 3 VSA[Q{I|L}] 5 -1 26.466 0.0 0.0 2.1161 0.0 0.0 734.4214214441314 0.0 734.4214214441314 0.0 15.206852642034612 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 VSA[Q{I|L}] 2.1161 - 823 1 1.468 88847.3 1.0 10789 5655 16435 HBL1_DMSO_200M_050219_1,16446 HBL1_DMSO_200M_050219_1,16446,FIILWFATQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16447 79.788 289.0 670900.0 25 0 113060.0 -1 0 131 974.9628167210068 1947.9110805088133 2 975.4691650271416 MULTI CID FTMS 0 0 0 16435 651247.875 0.4747341730536542 4 -0.3107986450195312 12 3 [DP]G{M(Oxidation (M))|F}EN{I|L}AN[YK]D{I|L}[NP]{[QN]|[E{I|L}]|[KN]} 17 -1 + 54.077 0.0 0.0 2.7761 2.7761 72.574 0.0 0.0 0.0 3.470020586145978 30.44702026854597 3.470020586145978 3.679767852945943 0 0.0 0.0 0.5451140161145328 1.385151878060192 [DP]G{M(Oxidation (M))|F}EN{I|L}AN[YK]D{I|L}[NP]{[QN]|[E{I|L}]|[KN]};[DP]G{M(Oxidation (M))|F}EN{I|L}A{I|L}[YE]D{I|L}[NP]{[QN]|[E{I|L}]|[KN]};[DP]G{M(Oxidation (M))|F}EN{I|L}AN[YK]D{I|L}{[HG]|PP}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[DP]G{M(Oxidation (M))|F}EN{I|L}A{I|L}[YE]D{I|L}{[HG]|PP}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[DP]G{M(Oxidation (M))|F}EARAN[YK]D{I|L}[NP]{[QN]|[E{I|L}]|[KN]};[NP]VYVSM[KG]AMAD{I|L}[NP]{[QN]|[E{I|L}]|[KN]};[NP]VYV{M(Oxidation (M))|F}[KS]QDAD{I|L}[NP]{[QN]|[E{I|L}]|[KN]};[DP]G{M(Oxidation (M))|F}EARA{I|L}[YE]D{I|L}[NP]{[QN]|[E{I|L}]|[KN]};[NP]VYV{M(Oxidation (M))|F}{I|L}{[ET]|[MV]}DAD{I|L}[NP]{[QN]|[E{I|L}]|[KN]};[DP]G{M(Oxidation (M))|F}EA{I|L}NN[YK]D{I|L}[NP]{[QN]|[E{I|L}]|[KN]} 2.7761;2.5872;2.4035;2.2146;2.1149;1.9629;1.9557;1.9259;1.8247;1.8035 -;-;-;-;-;-;-;-;-;- 21234 1 1.468 127587.9 1.0 10790 5655 16435 HBL1_DMSO_200M_050219_1,16447 HBL1_DMSO_200M_050219_1,16447, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16448 79.795 366.0 637190.0 25 0 51501.0 + 41803 VPVSGMQPPMT 11 174 381.8563299297026 1142.547160389308 3 381.8560668826103 MULTI CID FTMS 0 0 0 16435 593427.9375 0.4186678607381107 -2 0.176025390625 13 Unmodified _VPVSGMQPPMT_ REV__nc|ENSG00000073921|Q13492-2|PICALM 17.11289562659939 0.6791789249425932 3 [HQ]VPVC(Carbamidomethyl (C)){M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 -1 + 23.016 0.0 0.0 2.0144 2.0144 78.345 0.0 0.0 0.0 3.206488781810087 5.926420805117921 3.206488781810087 9.468234996746231 0 0.218765315847925 0.0 0.8996498648046141 0.25 [HQ]VPVC(Carbamidomethyl (C)){M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[HQ]VP[NS][WY]{I|L};[HQ]V{I|L}TCW{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}V[QA]SVC(Carbamidomethyl (C))V;{[VA]|[{I|L}G]}[Y{M(Oxidation (M))|F}][QA]SVC(Carbamidomethyl (C))V;[HQ]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[YE]G{I|L};[HQ]VP[NS]{[YC]|[HE]}PV;[YN]V[{I|L}A]C(Carbamidomethyl (C)){M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}T]{[YC]|[HE]}[NS]TRW;[HQ]{I|L}VTCW{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.0144;1.1857;0.88914;0.8753;0.74812;0.61125;0.54446;0.5106;0.50672;0.49348 -;-;-;-;-;-;-;-;-;- 1633 + 1 1.468 187464.5 1.0 10791 5655 16435 HBL1_DMSO_200M_050219_1,16448 HBL1_DMSO_200M_050219_1,16448,VPVSGMQPPMT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16449 79.801 381.0 736820.0 25 0 86334.0 + 21703 LPLRVPGL 8 170 432.7867198579895 863.5588867827789 2 432.7866699099541 MULTI CID FTMS 0 0 0 16435 519398.3125 0.6356518925666487 8 -0.64508056640625 14 Unmodified _LPLRVPGL_ REV__ENSG00000171714|ENST00000324559|ANO5 26.34127834903884 0.4900704351052977 3 {I|L}P{I|L} 3 -1 44.297 0.0 0.0 5.1296 0.0 0.0 0.0 537.3174532525999 537.3174532525999 29.68256871239447 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}P{I|L} 5.1296 + + 176 + 1 1.468 218767.1 1.0 10792 5655 16435 HBL1_DMSO_200M_050219_1,16449 HBL1_DMSO_200M_050219_1,16449,LPLRVPGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16450 79.804 140.0 922060.0 25 0 69979.0 + 24319 MEDLIHEI 8 144 500.2438072996745 998.4730616661492 2 500.2442504763603 MULTI CID FTMS 0 0 0 16435 473949.53125 1.0 0 0.0 15 Unmodified _MEDLIHEI_ ENSG00000147604|ENST00000352983|RPL7;ENST00000461513.1_1_17:49579856-49580498:-|nuORF;ENST00000478965.1_1_5:94161779-94162088:-|nuORF;ENST00000481157.1_1_12:65261855-65261975:-|nuORF 57.47134341890925 0.1146309765603773 3 MED{I|L}{I|L}N 6 3 61.208 0.0 0.0 6.1302 0.0 0.0 0.0 280.13108240299067 280.13108240299067 23.998424408385475 0.0 0.0 0.0 0 1.0356668758921828 1.5228787452803376 0.4247425010840047 0.0 MED{I|L}{I|L}N 6.1302 - 439 + 1 1.468 104955.4 1.0 10793 5655 16435 HBL1_DMSO_200M_050219_1,16450 HBL1_DMSO_200M_050219_1,16450,MEDLIHEI True True MEDLIHEI 79.80425 500.24425047636 4623870.5 16435.0 ENST00000481157.1_1_12:65261855-65261975:-|nuORF;;ENSG00000147604|ENST00000352983|RPL7;;ENST00000461513.1_1_17:49579856-49580498:-|nuORF;;ENST00000478965.1_1_5:94161779-94162088:-|nuORF 4.219232082366943 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16451 79.81 304.0 265990.0 25 0 52797.0 + 22786 LQRVVVEREAK 11 127 663.8950121760205 1325.7754714188409 2 663.8950683474541 MULTI CID FTMS 0 0 0 16435 479793.75 0.4511392990653876 8 -0.64508056640625 16 Unmodified _LQRVVVEREAK_ REV__ENSG00000107890|ENST00000376087|ANKRD26;REV__nc|ENSG00000107890|Q9UPS8-2|ANKRD26 2.735195868890462 0.8622431031272658 3 MNT{I|L}W 5 -1 14.614 0.0 0.0 1.1023 0.0 0.0 662.4727503268472 0.0 662.4727503268472 0.0 4.018330623335395 0.0 0.0 0 0.0 0.0 0.0 0.0 MNT{I|L}W 1.1023 - 155 + 1 1.468 72871.2 1.0 10794 5655 16435 HBL1_DMSO_200M_050219_1,16451 HBL1_DMSO_200M_050219_1,16451,LQRVVVEREAK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16452 79.817 304.0 303810.0 25 0 53872.0 + 30220 QWIIKPRQIIC 11 118 699.4082853715669 1396.8020178099337 2 699.4096557497978 MULTI CID FTMS 0 0 0 16435 482950.96875 0.8374017947012921 -1 0.0285720825195312 17 Unmodified _QWIIKPRQIIC_ REV__ENST00000511884.6_2_4:31145288-31145360:+|nuORF 1.3295316138638542 0.8688751186870782 3 {I|L} 1 -1 9.3971 0.0 0.0 0.67276 0.0 0.0 1265.7066484025102 0.0 1265.7066484025102 0.0 6.29818655252878 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.67276 + + 41 + 1 1.468 82327.6 1.0 10795 5655 16435 HBL1_DMSO_200M_050219_1,16452 HBL1_DMSO_200M_050219_1,16452,QWIIKPRQIIC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16453 79.824 406.0 620860.0 25 0 58369.0 + 38552 TSTKKSKG 8 195 418.7444565392539 0 418.7442199587822 PEAK CID FTMS 0 0 0 16435 457743.15625 0.4075744594131797 3 -0.2549285888671875 18 Unmodified _TSTKKSKG_ REV__ENSG00000186854|ENST00000409520|TRABD2A;REV__nc|ENSG00000186854|Q86V40-2|TRABD2A 0.6014990680409731 0.5987038357115059 3 AVC 3 -1 10.802 0.0 0.0 1.2929 0.0 0.0 145.07155914763888 414.2668152854085 559.3383744330474 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AVC 1.2929 - 266 + 1 1.468 195175.3 1.0 10796 5655 16435 HBL1_DMSO_200M_050219_1,16453 HBL1_DMSO_200M_050219_1,16453,TSTKKSKG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16454 79.829 306.0 423710.0 25 0 38250.0 + + -1 KLLDERLVTL 10 167 599.2726733217891 1196.530793710378 2 600.3714477419853 MULTI CID FTMS 0 0 0 -1 0 19 Carbamidomethyl (C) _LDRC(Carbamidomethyl (C))PSCFSL_ ENSG00000176390|ENST00000324238|CRLF3;nc|ENSG00000176390|Q8IUI8-2|CRLF3 17.11289562659939 0.5604042439455784 3 {NN|[MP]|[D{I|L}]|[EV]}KHA{I|L}{I|L}Y 8 -1 40.139 0.0 0.0 3.3546 0.0 0.0 0.0 239.9757149352405 239.9757149352405 17.0791609475528 0.0 0.0 0.0 0 0.25 1.154901959985743 0.7742275032520141 0.0 {NN|[MP]|[D{I|L}]|[EV]}KHA{I|L}{I|L}Y 3.3546 - 2395 1 1.468 95073.9 1.0 10797 5655 16435 HBL1_DMSO_200M_050219_1,16454 HBL1_DMSO_200M_050219_1,16454,LDRCPSCFSL False False KLLDERLVTL 79.829384 600.371447741985 2395844.0 16435.0 ENSG00000176390|ENST00000324238|CRLF3;;nc|ENSG00000176390|Q8IUI8-2|CRLF3 4.307372172673543 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16455 79.835 311.0 370550.0 25 0 34803.0 + -1 YYTVRQLEL 9 156 592.312484973917 1182.610417014634 2 592.8167602419853 MULTI CID FTMS 0 0 0 16435 444632.21875 0.3242017606868408 8 -0.64508056640625 20 Carbamidomethyl (C) _SIVIFNAC(Carbamidomethyl (C))FL_ chr20:50510590-50564969|15|13.53|0.25|5.77|+|ENST00000541713|PTPN1,PTPN1;ENSG00000196396|ENST00000371621|PTPN1 9.38312468134398 0.6832340498775793 3 {NN|[MP]|[D{I|L}]|[EV]}[KQ]{I|L}{M(Oxidation (M))|F}{I|L}Y[SG] 10 -1 + 26.092 0.0 0.0 2.2063 2.2063 68.843 0.0 0.0 0.0 1.8237074251655687 6.487803220352355 1.8237074251655687 1.8237074251655687 0 0.0 1.0 0.5 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KQ]{I|L}{M(Oxidation (M))|F}{I|L}Y[SG];[VP]EE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}P[SG];{[QN]|[E{I|L}]|[KN]}[DP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}P[SG];{NN|[MP]|[D{I|L}]|[EV]}[EP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}P[SG];[VP]N[SG]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}P[SG];[{I|L}T][RN]{I|L}{M(Oxidation (M))|F}{I|L}Y[SG];[EP]D{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}P[SG];[{I|L}T]V[NG]{I|L}{M(Oxidation (M))|F}{I|L}C(Carbamidomethyl (C)){M(Oxidation (M))|F};[VP][WP][HK]{I|L}Y[SG];[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[NP]Q{I|L}P[SG] 2.2063;2.0521;2.0484;1.7722;1.7656;1.7199;1.6503;1.4896;1.3904;1.3375 -;-;-;-;-;-;-;-;-;- 803 1 1.468 91802.6 1.0 10798 5655 16435 HBL1_DMSO_200M_050219_1,16455 HBL1_DMSO_200M_050219_1,16455,SIVIFNACFL False False YYTVRQLEL 79.835073 592.816760241985 4493943.5 16435.0 chr20:50510590-50564969|15|13.53|0.25|5.77|+|ENST00000541713|PTPN1,PTPN1;;ENSG00000196396|ENST00000371621|PTPN1 5.721099058787028 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16457 79.84 63.0 954060.0 25 0 222290.0 42941 VVSPGPPPT 9 60 425.73876758299417 849.4629822327884 2 425.7390624880791 MULTI CID FTMS 0 0 0 16456 1068973.625 0.7440053111736312 3 -0.2265777587890625 1 Unmodified _VVSPGPPPT_ ENST00000430334.7_1_17:43514711-43515125:-|nuORF 4.3292370932331545 0.7635526921153418 3 VA 2 8 19.464 0.0 0.0 2.2913 0.0 0.0 0.0 676.3368941740808 676.3368941740808 12.474250108400469 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA 2.2913 - 4 + 1 1.442 51308.4 1.0 10799 5656 16456 HBL1_DMSO_200M_050219_1,16457 HBL1_DMSO_200M_050219_1,16457,VVSPGPPPT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16458 79.847 418.0 424880.0 25 0 42890.0 + 10754 KVFDFAGEEVRV 12 180 466.60810476811895 1396.8024849045569 3 466.6083862185478 MULTI CID FTMS 0 0 0 16456 269579.34375 0.407480306034205 -1 0.0842208862304687 2 Unmodified _FYKEKKEILSL_ ENST00000566901.5_1_16:75428986-75467250:-|nuORF;nc|ENSG00000153774|Q9UEE9-2|CFDP1;ENSG00000153774|ENST00000283882|CFDP1 5.731851221503515 0.8481046878870278 3 V 1 11 13.979 0.0 0.0 1.0008 0.0 0.0 1279.7228396792625 0.0 1279.7228396792625 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0008 - 679 + 1 1.442 147244.7 1.0 10800 5656 16456 HBL1_DMSO_200M_050219_1,16458 HBL1_DMSO_200M_050219_1,16458,FYKEKKEILSL False False KVFDFAGEEVRV 79.847211 466.608386218548 1225847.25 16456.0 ENST00000566901.5_1_16:75428986-75467250:-|nuORF;;nc|ENSG00000153774|Q9UEE9-2|CFDP1;;ENSG00000153774|ENST00000283882|CFDP1 -0.1357138802607854 3.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16459 79.848 15.0 3333300.0 25 0 262630.0 + 12234 GQWASVIRV 9 72 508.2879893005764 1014.5614256679528 2 508.2880737185478 MULTI CID FTMS 0 0 0 16456 3108600.75 0.7407628955229322 -1 0.0842208862304687 3 Unmodified _GQWASVIRV_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000562722.1_1_16:70597761-70599451:+|nuORF;nc|ENSG00000189091|Q15393-3|SF3B3 51.629811660486645 0.0367964933207742 3 {[QG]|[NA]}WASV{I|L}[RV] 9 0 + 56.29 0.0 0.0 5.5482 5.5482 79.254 0.0 0.0 0.0 44.69659678281481 8.697114610913488 8.697114610913488 3.0102999566398125 0 1.1307196863200843 0.0 0.3054621874040891 0.3054621874040891 + + {[QG]|[NA]}WASV{I|L}[RV];{[QG]|[NA]}WAVS{I|L}[RV];{[QG]|[NA]}WASV[RV]{I|L};{[QG]|[NA]}WAVS[RV]{I|L};{[QG]|[NA]}WVAS{I|L}[RV];{[QG]|[NA]}VWAS{I|L}[RV];{[QG]|[NA]}V[MN]V{I|L}[RV];{[QG]|[NA]}WVAS[RV]{I|L};{[QG]|[NA]}VWAS[RV]{I|L};{[QG]|[NA]}V[MN]V[RV]{I|L} 5.5482;5.2515;4.4802;4.1835;4.056;3.7354;3.0741;2.9879;2.6673;2.006 +;-;-;-;-;-;-;-;-;- + 213 + 1 1.442 43793.3 1.0 10801 5656 16456 HBL1_DMSO_200M_050219_1,16459 HBL1_DMSO_200M_050219_1,16459,GQWASVIRV True True GQWASVIRV 79.84839 508.288073718548 58061736.0 16456.0 ENST00000562722.1_1_16:70597761-70599451:+|nuORF;;nc|ENSG00000189091|Q15393-3|SF3B3;;ENSG00000189091|ENST00000302516|SF3B3 5.904959042867024 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16460 79.853 235.0 760020.0 25 0 118650.0 -1 0 138 612.2135579750496 611.2062815084496 1 612.2136718630791 MULTI CID FTMS 0 0 0 16456 750122.1875 0.409480376256627 5 -0.4290237426757812 4 3 {I|L} 1 -1 10.0 0.0 0.0 1.6361 0.0 0.0 480.1109273598152 0.0 480.1109273598152 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.6361 - 35 + 1 1.442 131429.0 1.0 10802 5656 16456 HBL1_DMSO_200M_050219_1,16460 HBL1_DMSO_200M_050219_1,16460, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16461 79.854 60.0 1153400.0 25 0 141270.0 + 37301 TIRYPDPLI 9 89 544.3109498194198 1086.6073467056394 2 544.3115722537041 MULTI CID FTMS 0 0 0 16456 807710.625 0.0257113821202911 -7 0.639312744140625 5 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 53.832793166522166 0.0319663582346103 3 [{I|L}T]S{[QN]|[E{I|L}]|[KN]}{[DS]|[MA]|[CV]|TT}P{I|L}{I|L} 10 4 + 55.752 0.0 0.0 5.1309 5.1309 81.234 0.0 0.0 0.0 5.880003999414853 16.53212513775344 5.880003999414853 5.880003999414853 0 1.5189301784845295 1.3010299956639813 1.110924374808178 0.0 [{I|L}T]S{[QN]|[E{I|L}]|[KN]}{[DS]|[MA]|[CV]|TT}P{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RD][{I|L}T]P{I|L}{I|L};[DP][YR][{I|L}T]P{I|L}{I|L};[{I|L}T]S{[QN]|[E{I|L}]|[KN]}[W{I|L}]{I|L}{I|L};{[TV]|[{I|L}S]}T{[QN]|[E{I|L}]|[KN]}{[DS]|[MA]|[CV]|TT}P{I|L}{I|L};{[TV]|[{I|L}S]}T{[QN]|[E{I|L}]|[KN]}[W{I|L}]{I|L}{I|L} 5.1309;4.5897;3.7844;3.6787;3.2303;1.7782 -;-;-;-;-;- 452 1 1.442 63193.3 1.0 10803 5656 16456 HBL1_DMSO_200M_050219_1,16461 HBL1_DMSO_200M_050219_1,16461,TIRYPDPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16462 79.859 255.0 404580.0 25 0 22340.0 -1 LPYLETMFTLL 11 144 678.8621313739283 1355.7097098146564 2 678.8626586794853 MULTI CID FTMS 0 0 0 16456 664547.25 1.0 0 0.0 6 Oxidation (M) _LPYLETM(Oxidation (M))FTLL_ ENSG00000086200|ENST00000325324|IPO11;nc|ENSG00000086200|Q9UI26-2|IPO11 30.63653989081413 0.3728473165938781 3 [{I|L}P]YH{I|L}NESTG{I|L}{I|L} 12 -1 + 78.406 0.0 0.0 5.7834 5.7834 85.939 0.0 0.0 0.0 10.41392685158226 16.611814434466197 10.41392685158226 8.77910535524633 0 0.9247425010840048 1.3010299956639813 0.75 0.2887254899964357 [{I|L}P]YH{I|L}NESTG{I|L}{I|L};[{I|L}P]YH{[QD]|[EN]|[WG]|[KD]|[RS]}T[SG]{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}H{I|L}NESTG{I|L}{I|L};[{I|L}P]YH{[QD]|[EN]|[WG]|[KD]|[RS]}TVTG{I|L}{I|L};[{I|L}P]YH{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}STG{I|L}{I|L};[{I|L}P]YH{I|L}NEA{[CA]|SS}{I|L}{I|L};[{I|L}P]YH{I|L}GGESTG{I|L}{I|L};[{I|L}P]YH{I|L}NC[RD]{I|L}{I|L};[{I|L}P]YH{[QD]|[EN]|[WG]|[KD]|[RS]}S{[SA]|[TG]}{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}TSHKNN{M(Oxidation (M))|F}{I|L}{I|L}{I|L} 5.7834;5.1358;5.0152;4.9833;4.9743;4.9564;4.8993;4.792;4.7839;4.7022 -;-;-;-;-;-;-;-;-;- 9872 1 1.442 80613.6 1.0 10804 5656 16456 HBL1_DMSO_200M_050219_1,16462 HBL1_DMSO_200M_050219_1,16462,LPYLETMFTLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16463 79.862 151.0 898130.0 25 0 84866.0 + 37725 TLQILFFL 8 144 497.8001293596122 993.5857057860244 2 497.8001586794853 MULTI CID FTMS 0 0 0 16456 621696.6875 0.1004783758619173 -7 0.639312744140625 7 Unmodified _TLQILFFL_ ENSG00000170915|ENST00000442253|PAQR8 74.39630413441286 0.1057069479668299 3 [{I|L}P]N{I|L}PVQT{I|L} 9 6 + 60.974 0.0 0.0 6.1368 6.1368 80.723 0.0 0.0 0.0 4.268604317929622 2.95880017344075 2.95880017344075 2.95880017344075 0 0.7134679910804405 1.0457574905606752 0.0 0.5 [{I|L}P]N{I|L}PVQT{I|L};[{I|L}P]N{I|L}TQ{I|L}[VP];[{I|L}T]QVPQ[VP]{I|L};[{I|L}P]N{I|L}TQ[VP]{I|L};[VP]Q{I|L}PVQT{I|L};[{I|L}P]N{I|L}PN{I|L}T{I|L};[{I|L}T]QVPQ{I|L}[VP];{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PVQT{I|L};[{I|L}P]N{I|L}T{I|L}Q[VP];[NP]{I|L}{I|L}PVQT{I|L} 6.1368;5.839;5.7071;5.6117;5.5746;5.4333;5.4312;5.4129;5.4089;5.3289 -;-;-;-;-;-;-;-;-;- 4685 1 1.442 103894.7 1.0 10805 5656 16456 HBL1_DMSO_200M_050219_1,16463 HBL1_DMSO_200M_050219_1,16463,TLQILFFL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16464 79.868 300.0 270170.0 25 0 50639.0 -1 TLLCPTFAKR 10 122 603.8368939741395 1205.6592350150788 2 603.8367797732353 MULTI CID FTMS 0 0 0 16456 462708.9375 0.6655084557368387 -1 0.0842208862304687 8 Carbamidomethyl (C) _TLLC(Carbamidomethyl (C))PTFAKR_ ENST00000480456.5_1_21:27087017-27087155:+|nuORF 13.90604991867851 0.6142120002215601 3 [WE]RV{I|L}T{I|L} 7 -1 34.953 0.0 0.0 2.8991 0.0 0.0 0.0 305.13504002900385 305.13504002900385 24.45886570567588 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.0 [WE]RV{I|L}T{I|L} 2.8991 - 768 1 1.442 61673.0 1.0 10806 5656 16456 HBL1_DMSO_200M_050219_1,16464 HBL1_DMSO_200M_050219_1,16464,TLLCPTFAKR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16465 79.871 169.0 760830.0 25 0 106380.0 + 18346 KVLGIVVGV 9 115 442.3022231456419 882.5898933580838 2 442.3023864626884 MULTI CID FTMS 0 0 0 16456 454910.75 0.2242259467872746 -2 0.11279296875 9 Unmodified _KVLGIVVGV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 64.23631603340823 0.0237365939569086 3 [VG]{I|L}{I|L}KVVGV 9 3 + 78.638 0.0 0.0 8.9099 8.9099 88.275 0.0 0.0 0.0 3.521825181113627 16.478174818886373 3.521825181113627 3.521825181113627 0 1.305462187404089 1.6989700043360187 0.0 0.0 [VG]{I|L}{I|L}KVVGV;VVA{I|L}KVVGV;[VG]{I|L}K{I|L}VVGV;[VG]{I|L}{I|L}VKVGV;VVAK{I|L}VVGV;[VG]{I|L}V{I|L}KVGV;VVA{I|L}VKVGV;[VG]{I|L}VK{I|L}VGV;[VG]V{I|L}{I|L}KVGV;VVAV{I|L}KVGV 8.9099;8.5109;7.9524;7.7719;7.5534;7.4308;7.3728;7.2652;7.0897;7.0318 -;-;-;-;-;-;-;-;-;- 1464 1 1.442 104685.0 1.0 10807 5656 16456 HBL1_DMSO_200M_050219_1,16465 HBL1_DMSO_200M_050219_1,16465,KVLGIVVGV True True KVLGIVVGV 79.870848 442.302386462688 11954371.0 16456.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 6.959056536356608 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16466 79.873 118.0 616010.0 25 0 98485.0 40804 VLLQRLEPV 9 105 533.8349137178119 1065.6552745024237 2 533.8356811404228 MULTI CID FTMS 0 0 0 16456 406333.71875 0.2433420728787357 8 -0.632537841796875 10 Unmodified _VLLQRLEPV_ ENSG00000161031|ENST00000340880|PGLYRP2;nc|ENSG00000161031|Q96PD5-2|PGLYRP2 18.13498045792455 0.3457906370836843 3 [VP][TA][PG]T{I|L}{I|L}VV 11 8 + 36.47 0.0 0.0 3.4223 3.4223 74.902 0.0 0.0 0.0 4.559319556497247 9.79751384325358 4.559319556497247 4.559319556497247 0 0.7429928190999391 0.8538719643217619 0.0 0.0 [VP][TA][PG]T{I|L}{I|L}VV;{[TV]|[{I|L}S]}[PA][PG]T{I|L}{I|L}VV;[PS][{I|L}A][PG]T{I|L}{I|L}VV;[{I|L}T][PG][PG]T{I|L}{I|L}VV;[H{I|L}]HHV{I|L}{I|L}VV 3.4223;2.9945;2.5079;2.2568;1.6901 -;-;-;-;- 233 1 1.442 63959.7 1.0 10808 5656 16456 HBL1_DMSO_200M_050219_1,16466 HBL1_DMSO_200M_050219_1,16466,VLLQRLEPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16467 79.879 302.0 351830.0 25 0 28003.0 + 11891 GLVKRRNEPTV 11 135 634.875212515245 1267.73587209729 2 634.8767578005791 MULTI CID FTMS 0 0 0 16456 446509.9375 0.5401621342522539 -4 0.3880538940429687 11 Unmodified _GLVKRRNEPTV_ REV__ENSG00000133243|ENST00000255608|BTBD2;REV__ENST00000587225.1_1_19:1989877-1990887:-|nuORF;REV__ENST00000589685.2_1_19:1986489-1990887:-|nuORF 9.38312468134398 0.8308777417566128 3 [TP]K 3 -1 12.503 0.0 0.0 0.98624 0.0 0.0 0.0 938.5180799375448 938.5180799375448 0.7201835010746542 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.2614393726401688 0.0 [TP]K 0.98624 - 220 1 1.442 84646.0 1.0 10809 5656 16456 HBL1_DMSO_200M_050219_1,16467 HBL1_DMSO_200M_050219_1,16467,GLVKRRNEPTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16468 79.885 314.0 459920.0 25 0 32608.0 + 31183 RLPPDTLLQQV 11 158 640.3727216794473 1278.7308904256945 2 640.8755370974541 MULTI CID FTMS 0 0 0 16456 402413.0625 0.5766458488963578 5 -0.4290237426757812 12 Unmodified _RLPPDTLLQQV_ ENSG00000169733|ENST00000310496|RFNG;ENST00000580953.5_1_17:80006604-80007747:-|nuORF;ENST00000582478.5_1_17:80006905-80007747:-|nuORF 12.174745833636583 0.7818979005474666 3 [PA]V{I|L}EG{I|L}{I|L} 8 9 32.27 0.0 0.0 2.5236 0.0 0.0 0.0 483.25559177091526 483.25559177091526 21.010703825212147 0.0 0.0 0.0 0 0.0 0.585026652029182 0.3054621874040891 0.0 [PA]V{I|L}EG{I|L}{I|L} 2.5236 - 988 1 1.442 112236.3 1.0 10810 5656 16456 HBL1_DMSO_200M_050219_1,16468 HBL1_DMSO_200M_050219_1,16468,RLPPDTLLQQV False True RLPPDTLLQQV 79.884573 640.875537097454 27106628.0 16456.0 ENST00000582478.5_1_17:80006905-80007747:-|nuORF;;ENST00000580953.5_1_17:80006604-80007747:-|nuORF;;ENSG00000169733|ENST00000310496|RFNG 5.649763425191243 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16469 79.888 165.0 1094800.0 25 0 102130.0 -1 TTRTTMTL 8 167 470.7408818917711 939.4672108503422 2 470.7414428591728 MULTI CID FTMS 0 0 0 16456 389914.71875 0.7197752587056188 -1 0.0842208862304687 13 Oxidation (M) _TTRTTM(Oxidation (M))TL_ ENSG00000184956|ENST00000421673|MUC6 16.942295170755138 0.6606234159769251 3 {[VA]|[{I|L}G]}[Y{M(Oxidation (M))|F}][QA]E{I|L} 8 -1 + 18.134 0.0 0.0 1.9302 1.9302 69.178 0.0 0.0 0.0 3.239087409443183 0.9421249706470328 0.9421249706470328 2.218487496163563 0 0.1989700043360188 2.0 0.0 0.0 {[VA]|[{I|L}G]}[Y{M(Oxidation (M))|F}][QA]E{I|L};{[VA]|[{I|L}G]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L};{[VA]|[{I|L}G]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}]T{I|L};[{I|L}T]{[YC]|[HE]}[QA]E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YC(Carbamidomethyl (C))][KP]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QA][YE]G{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[DG]T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QA][YE]AV 1.9302;1.6941;1.3193;0.83998;0.47408;0.27924;0.20057;0.091799 -;-;-;-;-;-;-;- 733 1 1.442 136271.9 1.0 10811 5656 16456 HBL1_DMSO_200M_050219_1,16469 HBL1_DMSO_200M_050219_1,16469,TTRTTMTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16470 79.894 321.0 409110.0 25 0 41729.0 8172 EPQEPQEPNK 10 147 598.2855159537862 1194.5564789743723 2 598.7870361208916 MULTI CID FTMS 0 0 0 16456 387895.40625 0.8840910865058843 2 -0.1707077026367187 14 Unmodified _EPQEPQEPNK_ ENSG00000133316|ENST00000278856|WDR74;nc|ENSG00000133316|Q6RFH5-2|WDR74 24.99096001346401 0.4071966087057876 3 [YV]Y[R{M(Oxidation (M))|F}]ERY 8 9 + 41.493 0.0 0.0 3.4735 3.4735 81.303 0.0 0.0 0.0 17.659372038888094 12.55424261292886 12.55424261292886 11.480625354554377 0 0.3252574989159953 2.0 0.2887254899964357 0.25 [YV]Y[R{M(Oxidation (M))|F}]ERY;[YV]Y[C(Carbamidomethyl (C))S][KG]RY;[EP]YVGYQP{[QD]|[EN]|[WG]|[KD]|[RS]};[YV]Y[R{M(Oxidation (M))|F}][HD]VP;[EP]Y[YR]QP{[QD]|[EN]|[WG]|[KD]|[RS]};[EP]D[NG][VP]QP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}VGYQP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}{[DS]|[MA]|[CV]|TT}TYQP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[YR]QP{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}HE[R{M(Oxidation (M))|F}]YP{M(Oxidation (M))|F} 3.4735;2.5124;1.8862;1.8485;1.7612;1.7117;1.5988;1.5401;1.4738;1.4455 -;-;-;-;-;-;-;-;-;- 1361 + 1 1.442 99711.8 1.0 10812 5656 16456 HBL1_DMSO_200M_050219_1,16470 HBL1_DMSO_200M_050219_1,16470,EPQEPQEPNK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16471 79.903 475.0 828080.0 25 0 65573.0 + 30371 RALKLIIRL 9 161 365.9290572198503 1094.765342259751 3 365.9287597537041 MULTI CID FTMS 0 0 0 16456 341383.375 0.4005833911727726 -2 0.11279296875 15 Unmodified _RALKLIIRL_ ENSG00000133318|ENST00000377819|RTN3;nc|ENSG00000133318|O95197-2|RTN3;nc|ENSG00000133318|O95197-3|RTN3;nc|ENSG00000133318|O95197-4|RTN3;nc|ENSG00000133318|O95197-5|RTN3;nc|ENSG00000133318|O95197-7|RTN3 53.40400417844725 0.0329064971918313 3 {I|L}N{I|L}K{I|L}{I|L}{I|L} 7 4 48.888 0.0 0.0 4.4656 0.0 0.0 0.0 284.1736917544604 284.1736917544604 23.06933472159166 0.0 0.0 0.0 0 1.742992819099939 0.0 0.0 0.4247425010840047 {I|L}N{I|L}K{I|L}{I|L}{I|L} 4.4656 - 236 + 1 1.442 309552.2 1.0 10813 5656 16456 HBL1_DMSO_200M_050219_1,16471 HBL1_DMSO_200M_050219_1,16471,RALKLIIRL True True RALKLIIRL 79.903223 365.928759753704 5065790.0 16456.0 nc|ENSG00000133318|O95197-3|RTN3;;nc|ENSG00000133318|O95197-7|RTN3;;ENSG00000133318|ENST00000377819|RTN3;;nc|ENSG00000133318|O95197-4|RTN3;;nc|ENSG00000133318|O95197-5|RTN3;;nc|ENSG00000133318|O95197-2|RTN3 4.72340726852417 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16472 79.906 109.0 995930.0 25 0 199590.0 + 20538 LLLSNVFMSC 10 118 563.7836837866366 1125.5528146400732 2 563.7825195193291 MULTI CID FTMS 0 0 0 16456 303008.625 0.1301207415254032 -2 0.11279296875 16 Unmodified _LLLSNVFMSC_ REV__ENSG00000115368|ENST00000314761|WDR75;REV__ENST00000436347.5_1_2:190313199-190340140:+|nuORF 26.268140514670165 0.3785003716575977 3 {I|L}{I|L}D 3 -1 51.995 0.0 0.0 4.6195 0.0 0.0 0.0 781.3412569635374 781.3412569635374 13.251057427264158 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.3807196863200844 0.0 {I|L}{I|L}D 4.6195 - 938 + 1 1.442 86538.6 1.0 10814 5656 16456 HBL1_DMSO_200M_050219_1,16472 HBL1_DMSO_200M_050219_1,16472,LLLSNVFMSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16473 79.913 444.0 411300.0 25 0 25428.0 + 10168 FPYKIPAV 8 199 467.7730311584554 933.5315093837108 2 467.7733642458916 MULTI CID FTMS 0 0 0 16456 320904.125 1.0 0 0.0 17 Unmodified _FPYKIPAV_ ENSG00000144635|ENST00000273130|DYNC1LI1;ENST00000481915.5_1_3:32574447-32611850:-|nuORF 56.541270873467816 0.1144128637334507 3 {M(Oxidation (M))|F}PYK{I|L}PAV 8 0 + 35.464 0.0 0.0 3.799 3.799 70.159 0.0 0.0 0.0 8.416375079047505 0.8715017571889945 0.8715017571889945 0.8715017571889945 0 0.975772496747986 0.0 0.0 0.0 + + {M(Oxidation (M))|F}PYK{I|L}PAV;{M(Oxidation (M))|F}PYK{I|L}PG{I|L};{M(Oxidation (M))|F}PYK{I|L}APV;{M(Oxidation (M))|F}PYK{I|L}PVA;{M(Oxidation (M))|F}PYK{I|L}VPA;{M(Oxidation (M))|F}[{I|L}T]A{I|L}DRV;{M(Oxidation (M))|F}PYK{I|L}{I|L}[PG];{M(Oxidation (M))|F}[{I|L}T]A{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{M(Oxidation (M))|F}[{I|L}T]A{I|L}[W{I|L}]A;{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}RE 3.799;3.7056;3.3831;3.3054;2.5365;2.491;2.4529;2.1374;1.4434;0.63137 +;-;-;-;-;-;-;-;-;- + 800 + 1 1.442 141288.5 1.0 10815 5656 16456 HBL1_DMSO_200M_050219_1,16473 HBL1_DMSO_200M_050219_1,16473,FPYKIPAV True True FPYKIPAV 79.913427 467.773364245892 2768547.75 16456.0 ENST00000481915.5_1_3:32574447-32611850:-|nuORF;;ENSG00000144635|ENST00000273130|DYNC1LI1 5.86197582880656 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16474 79.92 372.0 684870.0 25 0 117560.0 + -1 YPFILPHQQV 10 154 620.6407649090406 1858.9004653273216 3 620.9763671755791 MULTI CID FTMS 0 0 0 16456 285668.5625 0.1143256053005374 -16 1.3836822509765625 18 nc|ENSG00000232119|Q9ULC4-2|MCTS1;ENSG00000101898|ENST00000394552|MCTS2;ENSG00000232119|ENST00000371317|MCTS1;nc|ENSG00000232119|Q9ULC4-3|MCTS1;ENST00000487133.1_1_X:119739298-119742228:+|nuORF 3 {[MS]|[{M(Oxidation (M))|F}A]}KE{I|L}HS{I|L}D{M(Oxidation (M))|F}HP{M(Oxidation (M))|F} 13 -1 49.576 0.0 0.0 2.6669 0.0 0.0 0.0 287.1044726854124 287.1044726854124 7.372317549929733 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.2396518287104437 {[MS]|[{M(Oxidation (M))|F}A]}KE{I|L}HS{I|L}D{M(Oxidation (M))|F}HP{M(Oxidation (M))|F} 2.6669 - 10368 1 1.442 188797.1 1.0 10816 5656 16456 HBL1_DMSO_200M_050219_1,16474 HBL1_DMSO_200M_050219_1,16474, False False YPFILPHQQV 79.920123 620.976367175579 5194157.5 16456.0 nc|ENSG00000232119|Q9ULC4-2|MCTS1;;ENSG00000101898|ENST00000394552|MCTS2;;ENSG00000232119|ENST00000371317|MCTS1;;nc|ENSG00000232119|Q9ULC4-3|MCTS1;;ENST00000487133.1_1_X:119739298-119742228:+|nuORF 6.508508841196696 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16475 79.927 410.0 224150.0 25 0 53854.0 -1 0 77 1006.140124499798 0 1006.140124499798 PEAK CID FTMS 0 0 0 -1 0 19 3 HP{M(Oxidation (M))|F} 3 -1 13.188 0.0 0.0 0.65601 0.0 0.0 1004.719261595496 621.3458956354124 1626.0651572309084 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HP{M(Oxidation (M))|F} 0.65601 - 106 + 1 1.442 66440.1 1.0 10817 5656 16456 HBL1_DMSO_200M_050219_1,16475 HBL1_DMSO_200M_050219_1,16475, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16476 79.935 416.0 378700.0 25 0 65908.0 + -1 LPNIPVQTI 9 116 995.4420208050624 0 995.440478503704 PEAK CID FTMS 0 0 0 16456 220095.46875 1.0 0 0.0 20 ENSG00000072274|ENST00000360110|TFRC 3 NTE[VP]{I|L}{I|L} 7 -1 17.796 0.0 0.0 0.8948 0.0 0.0 1011.3033398505556 208.0738314264281 1219.377171276984 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 NTE[VP]{I|L}{I|L} 0.8948 - 1336 + 1 1.442 106805.3 1.0 10818 5656 16456 HBL1_DMSO_200M_050219_1,16476 HBL1_DMSO_200M_050219_1,16476, False False LPNIPVQTI 79.934945 995.440478503704 81676296.0 16456.0 ENSG00000072274|ENST00000360110|TFRC 5.104925155639648 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16478 79.939 13.0 3350200.0 25 0 281210.0 + 2814 ATYVFLHTV 9 85 525.7845202789968 1049.5544876247934 2 525.7848998904228 MULTI CID FTMS 0 0 0 16477 2332074.75 0.3261873847296046 3 -0.2693328857421875 1 Unmodified _ATYVFLHTV_ ENSG00000123353|ENST00000243045|ORMDL2 21.74664581756881 0.2544899275067181 3 [YV]{M(Oxidation (M))|F}{I|L}RVM 7 5 36.163 0.0 0.0 3.4456 0.0 0.0 0.0 138.05220425981216 138.05220425981216 25.87282613361687 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YV]{M(Oxidation (M))|F}{I|L}RVM 3.4456 - 158 1 1.388 38249.5 1.0 10819 5657 16477 HBL1_DMSO_200M_050219_1,16478 HBL1_DMSO_200M_050219_1,16478,ATYVFLHTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16479 79.94 44.0 1215100.0 25 0 87919.0 -1 GAAFLFMTFH 10 71 386.51928844473525 1156.5360359344058 3 386.5193359255791 MULTI CID FTMS 0 0 0 16477 900311.375 0.3037663019695131 1 -0.0708694458007812 2 Oxidation (M) _GAAFLFM(Oxidation (M))TFH_ ENSG00000112249|ENST00000369162|ASCC3;ENST00000468245.2_1_6:101296020-101315873:-|nuORF;nc|ENSG00000112249|Q8N3C0-4|ASCC3 12.872603262515298 0.6315522313594999 3 V{I|L}{M(Oxidation (M))|F} 3 -1 22.703 0.0 0.0 1.963 0.0 0.0 0.0 794.3109038723593 794.3109038723593 2.2577249674798594 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}{M(Oxidation (M))|F} 1.963 - 42 + 1 1.388 53134.6 1.0 10820 5657 16477 HBL1_DMSO_200M_050219_1,16479 HBL1_DMSO_200M_050219_1,16479,GAAFLFMTFH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16480 79.941 23.0 2626000.0 25 0 347070.0 + 35780 SVIPVINKI 9 85 491.8185775800388 981.6226022268776 2 491.8186218142509 MULTI CID FTMS 0 0 0 16477 2380542.25 0.8501665616551329 -1 0.0998382568359375 3 Unmodified _SVIPVINKI_ ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF 43.85829265575387 0.0542763391141878 3 [VS]{I|L}PV{I|L}NK{I|L} 9 0 + 66.877 0.0 0.0 6.8129 6.8129 88.148 0.0 0.0 0.0 19.620988231865866 7.231036840527381 7.231036840527381 7.231036840527381 0 0.4247425010840047 1.6989700043360187 0.0 0.4247425010840047 + + [VS]{I|L}PV{I|L}NK{I|L};[VS]{I|L}PV{I|L}QKV;[VS]{I|L}PV{I|L}GGK{I|L};[VS]{I|L}PV{I|L}[AG]KV 6.8129;6.0762;5.8748;5.1382 +;-;-;- + 176 + 1 1.388 49180.4 1.0 10821 5657 16477 HBL1_DMSO_200M_050219_1,16480 HBL1_DMSO_200M_050219_1,16480,SVIPVINKI True True SVIPVINKI 79.941389 491.818621814251 53863640.0 16477.0 ENST00000506793.5_1_4:44680541-44700695:+|nuORF;;ENSG00000151806|ENST00000281543|GUF1 4.387280543645223 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16481 79.943 13.0 3641600.0 25 0 517900.0 + 13551 HPFPGPGLAI 10 74 503.2785292671678 1004.5425056011356 2 503.2798644900322 MULTI CID FTMS 0 0 0 16477 2010642.625 0.5815216420682336 -3 0.2126312255859375 4 Unmodified _HPFPGPGLAI_ ENSG00000163655|ENST00000496455|GMPS;nc|ENSG00000163655|P49915-2|GMPS 24.67388899826682 0.4143206957119831 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG]{I|L}[{I|L}A] 9 3 + 23.335 0.0 0.0 2.323 2.323 76.034 0.0 0.0 0.0 2.533468248101091 8.731355830985027 2.533468248101091 7.727562184969374 0 0.4247425010840047 1.5228787452803376 0.4247425010840047 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG]{I|L}[{I|L}A];[{M(Oxidation (M))|F}E][RK]E{I|L}[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[PG][PG]{I|L}[{I|L}A];[{M(Oxidation (M))|F}E][RK]QN[{I|L}A];[{M(Oxidation (M))|F}E][RK][AG]N[{I|L}A];[{M(Oxidation (M))|F}E][RK]QGG[{I|L}A] 2.323;1.5537;1.2846;0.95439;0.032368;0.032368 -;-;+;-;-;- + 143 1 1.388 39499.3 1.0 10822 5657 16477 HBL1_DMSO_200M_050219_1,16481 HBL1_DMSO_200M_050219_1,16481,HPFPGPGLAI False True HPFPGPGLAI 79.942566 503.279864490032 142214124.0 16477.0 nc|ENSG00000163655|P49915-2|GMPS;;ENSG00000163655|ENST00000496455|GMPS 5.739312807718913 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16482 79.944 33.0 2014200.0 25 0 228150.0 14471 IGDWLNLIFK 10 91 609.8495875822686 1217.684622231337 2 610.3513061404228 MULTI CID FTMS 0 0 0 16477 2180354.25 1.0 0 0.0 5 Unmodified _IGDWLNLIFK_ ENSG00000152254|ENST00000375363|G6PC2;nc|ENSG00000152254|Q9NQR9-2|G6PC2;nc|ENSG00000152254|Q9NQR9-3|G6PC2 5.731851221503515 0.7001233259664787 3 [EP]V{[RE]|[WV]}[WK]K{M(Oxidation (M))|F} 9 8 [EP]V{[RE]|[WV]}[WK]K + + 11.259 -12.051 -1.1449 0.92463 0.92463 48.365 0.0 0.0 0.0 0.0 -4.31413403487344 -4.31413403487344 0.0 0 0.0 0.0 0.0 0.0 [EP]V{[RE]|[WV]}[WK]K{M(Oxidation (M))|F} 0.92463 - 79 + 1 1.388 56190.3 1.0 10823 5657 16477 HBL1_DMSO_200M_050219_1,16482 HBL1_DMSO_200M_050219_1,16482,IGDWLNLIFK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16483 79.945 20.0 1854200.0 25 0 175060.0 + 26232 NQITQLESL 9 78 523.2800357659532 1044.5455185987064 2 523.2809326052666 MULTI CID FTMS 0 0 0 16477 1934919.625 0.2153946472151098 -3 0.2126312255859375 6 Unmodified _NQITQLESL_ ENSG00000138180|ENST00000371485|CEP55;ENST00000496302.1_1_10:95278654-95279576:+|nuORF 30.63653989081413 0.1413794767160703 3 THS{I|L} 4 6 41.063 0.0 0.0 3.9311 0.0 0.0 588.3106075653064 0.0 588.3106075653064 0.0 31.229698991760472 0.0 0.0 0 0.5 0.0 0.7134679910804405 0.0 THS{I|L} 3.9311 - 174 + 1 1.388 36061.1 1.0 10824 5657 16477 HBL1_DMSO_200M_050219_1,16483 HBL1_DMSO_200M_050219_1,16483,NQITQLESL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16484 79.947 78.0 1588100.0 25 0 192680.0 + 45601 YVIAFGLL 8 112 448.26882937630086 894.5231058194017 2 448.2685729861259 MULTI CID FTMS 0 0 0 16477 1272250.375 0.8446366171525083 -1 0.0998382568359375 7 Unmodified _YVIAFGLL_ REV__ENSG00000277399|ENST00000616987|GPR179;REV__nc|ENSG00000277399|Q6PRD1|GPR179 24.20995872069341 0.5349487244130675 3 [YV]{I|L}PKY{I|L} 7 -1 + 53.773 0.0 0.0 6.0113 6.0113 83.775 0.0 0.0 0.0 21.79219922410468 5.228787452803374 5.228787452803374 5.228787452803374 0 0.3807196863200844 2.0 0.0 0.0 [YV]{I|L}PKY{I|L};[YV]{I|L}PK{I|L}Y;[YV]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L};[{I|L}P]K{I|L}VYY;[{I|L}P]KVPD{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]KV{I|L}YY;[KP]{I|L}{I|L}VYY;[KP]{I|L}VPD{[QV]|[N{I|L}]|[RA]|[KV]};[KP]{I|L}V{I|L}YY;[K{I|L}]P{I|L}VYY 6.0113;5.4268;4.4997;3.5751;3.0645;3.0418;2.7289;2.2183;2.1955;1.8201 -;-;-;-;-;-;-;-;-;- 290 + 1 1.388 101626.4 1.0 10825 5657 16477 HBL1_DMSO_200M_050219_1,16484 HBL1_DMSO_200M_050219_1,16484,YVIAFGLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16485 79.948 46.0 1228500.0 25 0 175650.0 + 39031 TVTITGIVKV 10 79 515.8292053433445 1029.6438577534889 2 515.8293334841728 MULTI CID FTMS 0 0 0 16477 745975.9375 0.3305249712249015 3 -0.2693328857421875 8 Unmodified _TVTITGIVKV_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 29.84058131909904 0.2982332456971691 3 {[TV]|[{I|L}S]}TA{I|L} 5 6 48.188 0.0 0.0 4.68 0.0 0.0 0.0 541.3333773670232 541.3333773670232 21.39961168141376 0.0 0.0 0.0 0 1.0 2.0 0.8494850021680094 0.0 {[TV]|[{I|L}S]}TA{I|L} 4.68 - 199 1 1.388 49941.6 1.0 10826 5657 16477 HBL1_DMSO_200M_050219_1,16485 HBL1_DMSO_200M_050219_1,16485,TVTITGIVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16486 79.953 241.0 437340.0 25 0 39867.0 + + 6767 DTNADKQLSFEEF 13 121 772.3487779476859 1542.6830029621717 2 772.3506347537041 MULTI CID FTMS 0 0 0 16477 689256.875 1.0 0 0.0 9 Unmodified _EDWSRWINQYF_ ENSG00000163220|ENST00000368738|S100A9 13.042465956692816 0.7638483625850725 3 [DP]VTV{M(Oxidation (M))|F}{I|L}NS{M(Oxidation (M))|F}EE{M(Oxidation (M))|F} 13 -1 + 76.073 0.0 0.0 4.9312 4.9312 72.654 0.0 0.0 0.0 0.5771571500873591 6.704724727328909 0.5771571500873591 0.4007424796811278 0 0.9177353201839438 0.0 1.8996498648046136 0.4247425010840047 [DP]VTV{M(Oxidation (M))|F}{I|L}NS{M(Oxidation (M))|F}EE{M(Oxidation (M))|F};[DP]VE{M(Oxidation (M))|F}A{I|L}NS{M(Oxidation (M))|F}EE{M(Oxidation (M))|F};EE{M(Oxidation (M))|F}[RP]{I|L}NS{M(Oxidation (M))|F}EE{M(Oxidation (M))|F};[DP]VE{M(Oxidation (M))|F}GQ{I|L}S{M(Oxidation (M))|F}EE{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]E[RP]{I|L}NS{M(Oxidation (M))|F}EE{M(Oxidation (M))|F};{[TV]|[{I|L}S]}QKSD{I|L}NS{M(Oxidation (M))|F}EE{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}E{M(Oxidation (M))|F}SN{I|L}A[RH]E{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S{M(Oxidation (M))|F}EE{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[DP]{M(Oxidation (M))|F}A{I|L}NS{M(Oxidation (M))|F}EE{M(Oxidation (M))|F};EEEEKQ{I|L}S{M(Oxidation (M))|F}EE{M(Oxidation (M))|F} 4.9312;4.9053;4.8938;4.7792;4.5702;4.5021;4.4966;4.493;4.4313;4.4205 -;-;-;-;-;-;-;-;-;- 9067 1 1.388 78835.8 1.0 10827 5657 16477 HBL1_DMSO_200M_050219_1,16486 HBL1_DMSO_200M_050219_1,16486,EDWSRWINQYF False False DTNADKQLSFEEF 79.952512 772.350634753704 5157564.5 16477.0 ENSG00000163220|ENST00000368738|S100A9 6.843897819519043 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16487 79.957 243.0 512710.0 25 0 28129.0 + 24336 MEKSCLTL 8 125 924.4550981160368 923.4478216494368 1 924.4524413943292 MULTI CID FTMS 0 0 0 16477 680515.25 0.5504210363698423 7 -0.5326995849609375 10 Unmodified _MEKSCLTL_ REV__ENST00000507701.1_1_4:76587113-76598433:-|nuORF 16.942295170755138 0.6606234159769251 3 {[DA]|[EG]}VVH{I|L}A{[CP]|[EA]} 9 -1 + 32.941 0.0 0.0 3.5672 3.5672 77.84 0.0 0.0 0.0 0.9172730815605944 5.757207139381187 0.9172730815605944 7.077439286435244 0 0.0 1.3979400086720375 0.0 0.0 {[DA]|[EG]}VVH{I|L}A{[CP]|[EA]};[{I|L}T]T[YR]A{[CP]|[EA]};[NP]N{I|L}{I|L}[PG]{[CP]|[EA]};[NP]N{I|L}[VP]A{[CP]|[EA]};[{I|L}T][HS][VP]A{[CP]|[EA]};M{M(Oxidation (M))|F}{I|L}{[WN]|[YH]}T{I|L};MSA[YR]TPV;[{I|L}T][HS]{I|L}[PG]{[CP]|[EA]};[{I|L}T][H{I|L}]S[PG]{[CP]|[EA]};MSA[VP][HS]PV 3.5672;2.8008;2.6715;2.6667;2.6404;2.4437;2.3255;2.3144;2.2716;2.1652 -;-;-;-;-;-;-;-;-;- 1030 1 1.388 86012.5 1.0 10828 5657 16477 HBL1_DMSO_200M_050219_1,16487 HBL1_DMSO_200M_050219_1,16487,MEKSCLTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16488 79.962 287.0 812180.0 25 0 88553.0 + 16417 IYVNGAVLN 9 192 481.7682727239696 961.5219925147392 2 481.7695190310478 MULTI CID FTMS 0 0 0 16477 666992.0 0.8343977400935582 -1 0.0998382568359375 11 Unmodified _IYVNGAVLN_ REV__ENSG00000166450|ENST00000389286|PRTG 26.88365393820708 0.1891292719743517 3 V{I|L}AAMNV 7 -1 51.477 0.0 0.0 5.3537 0.0 0.0 245.14997528978543 0.0 245.14997528978543 0.0 30.223321618582908 0.0 0.0 0 0.0 0.0 0.0 1.4802046884880935 V{I|L}AAMNV 5.3537 - 2538 + 1 1.388 175084.3 1.0 10829 5657 16477 HBL1_DMSO_200M_050219_1,16488 HBL1_DMSO_200M_050219_1,16488,IYVNGAVLN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16489 79.965 143.0 812010.0 25 0 131140.0 + 4410 DAVRLINI 8 138 457.2771286462672 912.5397043593345 2 457.2772399783134 MULTI CID FTMS 0 0 0 16477 586525.375 0.8591781507191827 -1 0.0998382568359375 12 Unmodified _DAVRLINI_ ENSG00000113593|ENST00000261308|PPWD1;ENST00000511334.1_1_5:64872783-64879053:+|nuORF;nc|ENSG00000113593|Q96BP3-2|PPWD1 47.74868867922204 0.1498366402366518 3 {[DA]|[EG]}VR{I|L}{I|L}N{I|L} 8 0 + 53.141 0.0 0.0 5.8234 5.8234 84.993 0.0 0.0 0.0 7.20159303405957 7.924106657505661 7.20159303405957 7.20159303405957 0 1.579689690656103 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}VR{I|L}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}GR{I|L}{I|L}N{I|L};{[DA]|[EG]}V{[VA]|[{I|L}G]}V{I|L}N{I|L};{[DA]|[EG]}VR{I|L}{I|L}GG{I|L};{[DA]|[EG]}[R{I|L}]V{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}GR{I|L}{I|L}GG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KP]T{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q[KA]{I|L}N{I|L};{[VA]|[{I|L}G]}DR{I|L}{I|L}N{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[KA]{I|L}N{I|L} 5.8234;5.0343;4.9551;4.8085;4.385;4.0193;4.0179;3.8216;3.7937;3.5994 +;-;-;-;-;-;-;-;-;- + 1324 1 1.388 94692.2 1.0 10830 5657 16477 HBL1_DMSO_200M_050219_1,16489 HBL1_DMSO_200M_050219_1,16489,DAVRLINI False True DAVRLINI 79.965205 457.277239978313 5693846.0 16477.0 ENSG00000113593|ENST00000261308|PPWD1;;ENST00000511334.1_1_5:64872783-64879053:+|nuORF;;nc|ENSG00000113593|Q96BP3-2|PPWD1 4.021255652109782 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16490 79.97 258.0 534050.0 25 0 35212.0 + + 24076 DALWPPPDRV 10 168 582.8314531283376 1163.648353323475 2 582.8322021365166 MULTI CID FTMS 0 0 0 16477 577089.375 1.0 0 0.0 13 Unmodified _LYEEKVLASL_ ENSG00000111196|ENST00000320756|MAGOHB;ENST00000537852.5_1_12:10762420-10766167:-|nuORF;ENSG00000162385|ENST00000371470|MAGOH;ENST00000462941.1_1_1:53699171-53704129:-|nuORF 14.838274106304384 0.5985701837916485 3 {[DA]|[EG]}{I|L}WVVT 7 -1 24.874 0.0 0.0 2.1376 0.0 0.0 0.0 376.2077154663063 376.2077154663063 0.9325249512261458 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.3807196863200844 0.0 {[DA]|[EG]}{I|L}WVVT 2.1376 - 5073 1 1.388 107233.4 1.0 10831 5657 16477 HBL1_DMSO_200M_050219_1,16490 HBL1_DMSO_200M_050219_1,16490,LYEEKVLASL False False DALWPPPDRV 79.969997 582.832202136517 2388649.0 16477.0 ENSG00000111196|ENST00000320756|MAGOHB;;ENST00000537852.5_1_12:10762420-10766167:-|nuORF;;ENSG00000162385|ENST00000371470|MAGOH;;ENST00000462941.1_1_1:53699171-53704129:-|nuORF 2.695671876271566 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16491 79.972 76.0 841780.0 25 0 74390.0 + 8603 KAIDVVVMV 9 94 487.29033256558233 972.5661121979648 2 487.2915527224541 MULTI CID FTMS 0 0 0 16477 546090.5 0.2284702716243332 3 -0.2693328857421875 14 Unmodified _EVAVKVCLL_ ENSG00000204104|ENST00000373327|TRAF3IP1;nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1 24.020572477871973 0.2255576514309169 3 {[QN]|[E{I|L}]|[KN]}GKVVVET 9 7 + 49.817 0.0 0.0 5.1223 5.1223 74.294 0.0 0.0 0.0 0.9568378181977976 8.142492736872597 0.9568378181977976 0.9568378181977976 0 0.5994850021680094 1.0969100130080565 0.0 0.0 {[QN]|[E{I|L}]|[KN]}GKVVVET;{[TV]|[{I|L}S]}VQVVVET;{NN|[MP]|[D{I|L}]|[EV]}AKVVVET;[{I|L}A]KDVVVET;[{I|L}A]DKVVVET;{[QN]|[E{I|L}]|[KN]}GVKVVET;{[TV]|[{I|L}S]}[TP]KVVET;{NN|[MP]|[D{I|L}]|[EV]}AVKVVET;[{I|L}A]DVKVVET;{[QN]|[E{I|L}]|[KN]}GVVKVET 5.1223;5.0239;4.7131;4.6387;4.5102;4.5032;4.1229;4.094;3.8912;3.7031 -;-;-;-;-;-;-;-;-;- 416 1 1.388 55547.6 1.0 10832 5657 16477 HBL1_DMSO_200M_050219_1,16491 HBL1_DMSO_200M_050219_1,16491,EVAVKVCLL False False KAIDVVVMV 79.971751 487.291552722454 35287168.0 16477.0 ENSG00000204104|ENST00000373327|TRAF3IP1;;nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1 4.609328667322795 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16492 79.977 279.0 469920.0 25 0 72349.0 40577 VKMYNKAVKL 10 147 597.3582759814785 1192.701999029757 2 597.3605224490166 MULTI CID FTMS 0 0 0 16477 466113.46875 0.3555995342856402 -3 0.2126312255859375 15 Unmodified _VKMYNKAVKL_ ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1 5.731851221503515 0.7001233259664787 3 {[TV]|[{I|L}S]}HE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L} 8 7 22.053 0.0 0.0 1.849 0.0 0.0 0.0 222.16059212961943 222.16059212961943 4.148388694686851 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.2302046884880938 0.0 {[TV]|[{I|L}S]}HE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L} 1.849 - 820 1 1.388 99558.9 1.0 10833 5657 16477 HBL1_DMSO_200M_050219_1,16492 HBL1_DMSO_200M_050219_1,16492,VKMYNKAVKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16493 79.984 369.0 412090.0 25 0 50887.0 + 19844 LHKKIRTVDAE 11 190 437.25732389128825 1308.7501422740647 3 437.2573425173759 MULTI CID FTMS 0 0 0 16477 436668.0 0.6570900473639468 2 -0.126739501953125 16 Unmodified _LHKKIRTVDAE_ REV__ENSG00000107854|ENST00000371627|TNKS2 4.897010918128616 0.8520435188433833 3 {I|L}E 2 -1 14.508 0.0 0.0 1.1086 0.0 0.0 506.3350140103856 557.2718599908811 1063.6068740012668 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {I|L}E 1.1086 - 1166 + 1 1.388 138633.3 1.0 10834 5657 16477 HBL1_DMSO_200M_050219_1,16493 HBL1_DMSO_200M_050219_1,16493,LHKKIRTVDAE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16494 79.986 134.0 1132700.0 25 0 285730.0 + 11053 GDKLLMWTY 9 149 376.1925787209107 1125.5559067629322 3 376.1927673220634 MULTI CID FTMS 0 0 0 16477 343423.6875 0.3237656109028138 -1 0.0998382568359375 17 Unmodified _GDKLLMWTY_ REV__ENSG00000134242|ENST00000359785|PTPN22;REV__ENST00000484147.5_1_1:114375712-114414257:-|nuORF;REV__nc|ENSG00000134242|Q9Y2R2-2|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2-3|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2-4|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2|PTPN22 19.256988751693697 0.3154191944385105 3 {I|L}{I|L}D 3 -1 30.458 0.0 0.0 2.706 0.0 0.0 0.0 781.3404447351157 781.3404447351157 3.294420877014677 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}D 2.706 - 584 + 1 1.388 128537.8 1.0 10835 5657 16477 HBL1_DMSO_200M_050219_1,16494 HBL1_DMSO_200M_050219_1,16494,GDKLLMWTY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16495 79.992 322.0 365450.0 25 0 22352.0 + 2887 AVFDDDMEQL 10 164 591.7533700018548 1181.4921870705095 2 591.7557250857353 MULTI CID FTMS 0 0 0 16477 273245.8125 0.9512776080354164 -1 0.0998382568359375 18 Unmodified _AVFDDDMEQL_ ENSG00000074054|ENST00000696935|CLASP1;ENST00000472776.1_1_2:122122630-122145458:-|nuORF;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1 15.847184025352805 0.5816416552707754 3 {[QN]|[E{I|L}]|[KN]}WM[NP]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 9 10 + 20.642 0.0 0.0 1.7471 1.7471 71.419 0.0 0.0 0.0 4.611111633758096 0.4275196257277471 0.4275196257277471 3.640078085766092 0 0.0 0.6777807052660807 0.1694451763165201 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}WM[NP]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QN]|[E{I|L}]|[KN]}E{[MG]|[TS]}[NP]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QN]|[E{I|L}]|[KN]}[HV][YE]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[VA]|[{I|L}G]}A[NG]{M(Oxidation (M))|F}[NP]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QN]|[E{I|L}]|[KN]}[DP][C(Carbamidomethyl (C))R]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[VP]EE[C(Carbamidomethyl (C))R]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[VP][MT]M[NP]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[VP]{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}[NP]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[VP]N[PA][YE]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QN]|[E{I|L}]|[KN]}[HV]M{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 1.7471;1.439;1.1555;1.077;1.0735;0.91296;0.80722;0.80722;0.78349;0.69728 -;-;-;-;-;-;-;-;-;- 947 1 1.388 90989.6 1.0 10836 5657 16477 HBL1_DMSO_200M_050219_1,16495 HBL1_DMSO_200M_050219_1,16495,AVFDDDMEQL False True AVFDDDMEQL 79.992108 591.755725085735 2622943.5 16477.0 nc|ENSG00000074054|Q7Z460-5|CLASP1;;ENST00000472776.1_1_2:122122630-122145458:-|nuORF;;nc|ENSG00000074054|Q7Z460-4|CLASP1;;nc|ENSG00000074054|Q7Z460|CLASP1;;nc|ENSG00000074054|Q7Z460-3|CLASP1;;ENSG00000074054|ENST00000696935|CLASP1;;nc|ENSG00000074054|Q7Z460-2|CLASP1 4.64868148167928 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16496 80.0 374.0 981500.0 25 0 96665.0 + 18036 KSPEGFFQV 9 248 519.7666487358082 1037.5187445384165 2 519.7666503787041 MULTI CID FTMS 0 0 0 16477 251999.734375 0.102288726623754 -3 0.2126312255859375 19 Unmodified _KSPEGFFQV_ ENSG00000158481|ENST00000368170|CD1C 86.33184430468982 0.0159826143231117 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}NR{M(Oxidation (M))|F}QV 8 5 + 84.546 0.0 0.0 8.1489 8.1489 85.588 0.0 0.0 0.0 10.167476764022098 16.409780573583305 10.167476764022098 2.605932248563548 0 0.899649864804614 1.3010299956639813 1.2809455398520893 0.7614393726401688 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}NR{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}SK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}[RN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}NR{M(Oxidation (M))|F}[AG]V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}N[VG]{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}GGR{M(Oxidation (M))|F}QV;[EP]G{M(Oxidation (M))|F}SK{M(Oxidation (M))|F}QV;{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}DK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}SK{M(Oxidation (M))|F}[AG]V 8.1489;7.8977;7.5081;7.464;7.2562;7.2562;7.2562;7.1689;7.0453;7.0102 -;-;-;-;-;-;-;-;-;- 9245 1 1.388 276569.4 1.0 10837 5657 16477 HBL1_DMSO_200M_050219_1,16496 HBL1_DMSO_200M_050219_1,16496,KSPEGFFQV True True KSPEGFFQV 80.000014 519.766650378704 34222384.0 16477.0 ENSG00000158481|ENST00000368170|CD1C 5.767298062642415 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16497 80.006 318.0 81755.0 25 0 2782.8 -1 KKKKKKKKEKK 11 68 736.0175503770847 0 736.0153686404228 PEAK CID FTMS 0 0 0 16477 411550.59375 1.0 0 0.0 20 Acetyl (Protein N-term) _(Acetyl (Protein N-term))KKKKKKKKEKK_ ENST00000349223.9_1_16:68260779-68260980:+|nuORF;REV__ENST00000403491.7_1_1:61923769-61923901:+|nuORF 0.0 0.4761840153648598 3 S 1 -1 1.5938 0.0 0.0 0.10842 0.0 0.0 902.270622139132 477.7038363092407 1379.9744584483726 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.10842 - 3 + 1 1.388 28615.9 1.0 10838 5657 16477 HBL1_DMSO_200M_050219_1,16497 HBL1_DMSO_200M_050219_1,16497,KKKKKKKKEKK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16499 80.01 0.24 97901000.0 25 0 9620600.0 19428 LEVPLGDYTL 10 55 560.3015923871525 1118.5886318411049 2 560.3026611208916 MULTI CID FTMS 0 0 0 16498 205433520.0 0.8812475317084099 1 -0.0558700561523437 1 Unmodified _LEVPLGDYTL_ ENSG00000099998|ENST00000327365|GGT5;nc|ENSG00000099998|P36269-2|GGT5;nc|ENSG00000099998|P36269-3|GGT5 6.723162845929126 0.6955379296933136 3 T{I|L} 2 8 14.481 0.0 0.0 1.2946 0.0 0.0 886.446021222744 0.0 886.446021222744 0.0 3.511948583005857 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 + T{I|L} 1.2946 + + 13 + 1 1.363 27462.7 1.0 10839 5658 16498 HBL1_DMSO_200M_050219_1,16499 HBL1_DMSO_200M_050219_1,16499,LEVPLGDYTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16500 80.011 2.6 17296000.0 25 0 2628400.0 + 34899 SQIEADFRL 9 62 539.7800980862982 1077.5456432393962 2 539.7803832888603 MULTI CID FTMS 0 0 0 16498 19665938.0 0.7656704613402943 1 -0.0558700561523437 2 Unmodified _SQIEADFRL_ ENSG00000198900|ENST00000361337|TOP1 34.93206674587334 0.1032771302489716 3 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}] 9 2 + 59.627 0.0 0.0 5.5335 5.5335 90.585 0.0 0.0 0.0 52.63682493045401 11.39506772603255 11.39506772603255 59.6265249738142 0 0.9247425010840048 0.0 0.4247425010840047 0.4247425010840047 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}] 5.5335 - 66 + 1 1.363 38727.2 1.0 10840 5658 16498 HBL1_DMSO_200M_050219_1,16500 HBL1_DMSO_200M_050219_1,16500,SQIEADFRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16501 80.012 6.5 5764900.0 25 0 691960.0 + 24875 MPMQDIKMI 9 78 553.7739640129141 1105.533375092628 2 553.7748290896416 MULTI CID FTMS 0 0 0 16498 7657248.0 0.8479274675086091 1 -0.0558700561523437 3 Unmodified _MPMQDIKMI_ ENSG00000185686|ENST00000405655|PRAME 45.739877483867886 0.0497104363764649 3 MPMQPMKM 8 3 54.735 0.0 0.0 4.951 0.0 0.0 0.0 128.07210718326408 128.07210718326408 12.850716160957845 0.0 0.0 0.0 0 1.6677353201839438 1.6989700043360187 0.0 0.0 MPMQPMKM 4.951 - 523 + 1 1.363 36913.5 1.0 10841 5658 16498 HBL1_DMSO_200M_050219_1,16501 HBL1_DMSO_200M_050219_1,16501,MPMQDIKMI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16502 80.013 6.0 6162000.0 25 0 444490.0 + 43133 VYPEYVIQY 9 69 587.2950573805119 1172.5755618278238 2 587.2950927615166 MULTI CID FTMS 0 0 0 16498 7262425.5 0.2609408735150471 3 -0.2583160400390625 4 Unmodified _VYPEYVIQY_ ENSG00000059378|ENST00000263549|PARP12 28.486842064014134 0.1687311288560894 3 [YE]PVYV 6 5 25.406 0.0 0.0 2.1667 0.0 0.0 0.0 419.19193080659255 419.19193080659255 7.422750325201406 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [YE]PVYV 2.1667 - 165 1 1.363 34272.5 1.0 10842 5658 16498 HBL1_DMSO_200M_050219_1,16502 HBL1_DMSO_200M_050219_1,16502,VYPEYVIQY False True VYPEYVIQY 80.013403 587.295092761517 613935168.0 16498.0 ENSG00000059378|ENST00000263549|PARP12 7.649382591247559 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16503 80.015 7.8 4022500.0 25 0 288220.0 + -1 ARHHLPHCL 9 68 570.7944749602749 1139.5743969873497 2 570.7979003787041 MULTI CID FTMS 0 0 0 16498 3904736.75 1.0 0 0.0 5 Carbamidomethyl (C) _ARHHLPHC(Carbamidomethyl (C))L_ REV__ENSG00000257008|ENST00000582579|GPR142;REV__nc|ENSG00000257008|Q7Z601|GPR142 5.230669730166228 0.7320841359114558 3 [EP]A{I|L}DG[KQ]V[PS] 11 -1 + 28.112 0.0 0.0 2.4669 2.4669 75.285 0.0 0.0 0.0 1.7978688907200002 15.893914574316316 1.7978688907200002 6.575773191777937 0 0.0 0.0 0.0 0.0 [EP]A{I|L}DG[KQ]V[PS];[EP]A{I|L}D{I|L}[W{I|L}][PS];[EP]A{I|L}D{I|L}{[TV]|[{I|L}S]}[WP];[VP][DV]DG[KQ]V[PS];[VP][DV]D{I|L}[W{I|L}][PS];[VP][DV]D{I|L}{[TV]|[{I|L}S]}[WP];[EP]A{[RE]|[WV]}[KQ]V[PS] 2.4669;1.8899;1.8899;1.7804;1.2034;1.2034;0.50864 -;-;-;-;-;-;- 101 1 1.363 33539.4 1.0 10843 5658 16498 HBL1_DMSO_200M_050219_1,16503 HBL1_DMSO_200M_050219_1,16503,ARHHLPHCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16504 80.016 16.0 3265500.0 25 0 397290.0 + 4344 DASLVFKV 8 72 439.752570102468 877.4905872717361 2 439.7527343630791 MULTI CID FTMS 0 0 0 16498 3955996.75 0.180669645099857 4 -0.3444595336914062 6 Unmodified _DASLVFKV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602816-23603164:-|nuORF 61.357469665136826 0.1155423183535659 3 {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV 8 0 + 69.972 0.0 0.0 7.9741 7.9741 87.578 0.0 0.0 0.0 17.41048801331864 3.979400086720375 3.979400086720375 3.979400086720375 0 1.086696871556164 2.0 0.0 0.0 + + {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV;{[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}VK;{[DA]|[EG]}S{I|L}VV{M(Oxidation (M))|F}K 7.9741;7.5206;6.9006 +;-;- + 110 + 1 1.363 45390.4 1.0 10844 5658 16498 HBL1_DMSO_200M_050219_1,16504 HBL1_DMSO_200M_050219_1,16504,DASLVFKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16505 80.017 30.0 1918700.0 25 0 139460.0 + 44929 YPPWPGKIV 9 80 528.7980392882323 1055.5815256432645 2 528.7979003787041 MULTI CID FTMS 0 0 0 16498 1905363.0 0.076269134802049 -28 2.4148483276367188 7 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 36.04419817259434 0.0971720506436186 3 YPPW 4 5 53.532 0.0 0.0 5.0713 0.0 0.0 0.0 509.3103105059231 509.3103105059231 40.51242981620092 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 + YPPW 5.0713 + + 224 + 1 1.363 52925.0 1.0 10845 5658 16498 HBL1_DMSO_200M_050219_1,16505 HBL1_DMSO_200M_050219_1,16505,YPPWPGKIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16506 80.018 46.0 1473700.0 25 0 91330.0 + 31295 RLYPEGLAQL 10 88 580.3269061775125 1158.6392594218248 2 580.3268310427666 MULTI CID FTMS 0 0 0 16498 1684530.375 0.1621212931242563 4 -0.3444595336914062 8 Unmodified _RLYPEGLAQL_ ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF 23.96415052054722 0.4302674029938662 3 G{I|L}AQ{I|L} 5 5 45.019 0.0 0.0 3.8855 0.0 0.0 658.3453206552517 0.0 658.3453206552517 0.0 31.91962823435958 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 + G{I|L}AQ{I|L} 3.8855 + + 93 1 1.363 56524.2 1.0 10846 5658 16498 HBL1_DMSO_200M_050219_1,16506 HBL1_DMSO_200M_050219_1,16506,RLYPEGLAQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16507 80.02 69.0 752990.0 25 0 141200.0 + 9783 FNLNFKTLITV 11 80 655.3817727593439 1308.7489925854877 2 655.3815795779228 MULTI CID FTMS 0 0 0 16498 1291656.0 0.400743745165827 7 -0.5082015991210938 9 Unmodified _FNLNFKTLITV_ REV__ENST00000518062.1_1_5:158588183-158590023:-|nuORF 5.731851221503515 0.8481046878870278 3 {M(Oxidation (M))|F}GSV 4 -1 21.67 0.0 0.0 1.6558 0.0 0.0 654.4004340911503 261.16172205142817 915.5621561425784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 {M(Oxidation (M))|F}GSV 1.6558 - 24 + 1 1.363 54361.8 1.0 10847 5658 16498 HBL1_DMSO_200M_050219_1,16507 HBL1_DMSO_200M_050219_1,16507,FNLNFKTLITV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16508 80.024 212.0 300860.0 25 0 30376.0 22880 LSAVFLISFLW 11 117 648.3743617341019 1294.7341705350036 2 648.3732177615166 MULTI CID FTMS 0 0 0 16498 832526.0625 0.3149021351682191 7 -0.5082015991210938 10 Unmodified _LSAVFLISFLW_ ENSG00000156466|ENST00000287020|GDF6 5.296884461304476 0.8501568894076437 3 {I|L} 1 10 11.42 0.0 0.0 0.88203 0.0 0.0 1163.6391368209397 0.0 1163.6391368209397 0.0 5.891111299384644 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.88203 + + 99 + 1 1.363 58860.7 1.0 10848 5658 16498 HBL1_DMSO_200M_050219_1,16508 HBL1_DMSO_200M_050219_1,16508,LSAVFLISFLW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16509 80.028 219.0 533820.0 25 0 44470.0 -1 0 142 785.6788485368983 2354.0147162108947 3 786.0136596560478 MULTI CID FTMS 0 0 0 16498 793949.4375 0.2424355815805318 -2 0.1707077026367187 11 3 [{M(Oxidation (M))|F}V]NQPTV 7 -1 36.04 0.0 0.0 1.531 0.0 0.0 0.0 1565.580426009976 1565.580426009976 11.284019876561516 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.805462187404089 0.5 [{M(Oxidation (M))|F}V]NQPTV 1.531 - 2981 1 1.363 95003.0 1.0 10849 5658 16498 HBL1_DMSO_200M_050219_1,16509 HBL1_DMSO_200M_050219_1,16509, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16510 80.03 99.0 2165500.0 25 0 154190.0 + 24860 MPMMPGPPM 9 171 494.7101918450441 0 494.7105895876884 PEAK CID FTMS 0 0 0 16498 538298.5 0.5368838111575998 3 -0.2583160400390625 12 Unmodified _MPMMPGPPM_ ENSG00000124562|ENST00000244520|SNRPC 28.17323086031832 0.1269780855172776 3 T{I|L}VQPY 6 8 26.441 0.0 0.0 2.6779 0.0 0.0 202.98976737973825 80.0149401300414 283.0047075097796 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 T{I|L}VQPY 2.6779 - 1343 + 1 1.363 159143.0 1.0 10850 5658 16498 HBL1_DMSO_200M_050219_1,16510 HBL1_DMSO_200M_050219_1,16510,MPMMPGPPM True True MPMMPGPPM 80.030199 494.710589587688 17015378.0 16498.0 ENSG00000124562|ENST00000244520|SNRPC 2.694073756535848 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16511 80.035 254.0 629380.0 25 0 74994.0 + 26678 NYLKIRLAWS 10 168 632.3613328012864 1262.708112669373 2 632.3627197146416 MULTI CID FTMS 0 0 0 16498 515876.0625 0.2452417727110825 6 -0.4618301391601562 13 Unmodified _NYLKIRLAWS_ REV__ENSG00000150051|ENST00000419761|MKX 9.38312468134398 0.6832340498775793 3 [YN]{I|L}E 4 -1 22.396 0.0 0.0 1.7736 0.0 0.0 0.0 740.4538761793914 740.4538761793914 8.900925144087779 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YN]{I|L}E 1.7736 - 569 1 1.363 123221.2 1.0 10851 5658 16498 HBL1_DMSO_200M_050219_1,16511 HBL1_DMSO_200M_050219_1,16511,NYLKIRLAWS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16512 80.041 310.0 657480.0 25 0 73352.0 + 5033 DGWTPLHV 8 167 462.7321557219596 923.4497585107192 2 462.7324096560478 MULTI CID FTMS 0 0 0 16498 555325.1875 0.0456492843506587 10 -0.716094970703125 14 Unmodified _DGWTPLHV_ ENSG00000183475|ENST00000332783|ASB7;nc|ENSG00000183475|Q9H672-2|ASB7 56.541270873467816 0.1144128637334507 3 [DG]WTP{I|L}VH 8 2 + 53.829 0.0 0.0 5.8291 5.8291 77.096 0.0 0.0 0.0 16.197887582883936 1.1809931207799451 1.1809931207799451 1.1809931207799451 0 0.9049471895720984 1.2218487496163564 0.4247425010840047 0.0 [DG]WTP{I|L}VH;[DG]WTP{I|L}HV;[DG]WTP[HV]{I|L};[DG]WT[HV]P{I|L};[DG]WT[H{I|L}]PV;[DG]{[ET]|[MV]}GP{I|L}VH;[DG]{[ET]|[MV]}GP{I|L}HV;[H{I|L}]PD[WK]E;[DG]{[ET]|[MV]}GP[HV]{I|L};[H{I|L}]PT[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F} 5.8291;5.7012;4.6716;3.8843;3.2094;3.1493;3.0214;2.4285;1.9918;1.9714 -;+;-;-;-;-;-;-;-;- + 890 + 1 1.363 157917.0 1.0 10852 5658 16498 HBL1_DMSO_200M_050219_1,16512 HBL1_DMSO_200M_050219_1,16512,DGWTPLHV True True DGWTPLHV 80.040582 462.732409656048 534530636.0 16498.0 ENSG00000183475|ENST00000332783|ASB7;;nc|ENSG00000183475|Q9H672-2|ASB7 8.628183523813883 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16513 80.045 255.0 214190.0 25 0 13678.0 -1 0 104 638.0053807660901 0 638.3387328982353 PEAK CID FTMS 0 0 0 16498 158708.65625 1.0 0 0.0 15 3 EQ{M(Oxidation (M))|F}V 4 -1 16.714 0.0 0.0 1.312 0.0 0.0 316.5383808300589 451.1949862115844 767.7333670416433 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 EQ{M(Oxidation (M))|F}V 1.312 - 51 + 1 1.363 48804.2 1.0 10853 5658 16498 HBL1_DMSO_200M_050219_1,16513 HBL1_DMSO_200M_050219_1,16513, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16514 80.047 42.0 1862700.0 25 0 245320.0 + 20990 LNRDREWL 8 95 551.2954604996783 1100.5763680661564 2 551.2966796755791 MULTI CID FTMS 0 0 0 16498 355515.71875 1.0 0 0.0 16 Unmodified _LNRDREWL_ REV__ENSG00000123171|ENST00000242819|CCDC70 16.942295170755138 0.6606234159769251 3 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PV{I|L}T{I|L}{[QG]|[NA]} 10 -1 + 41.877 0.0 0.0 3.805 3.805 73.28 0.0 0.0 0.0 2.930728155445941 5.764837301042718 2.930728155445941 2.930728155445941 0 0.8494850021680094 1.154901959985743 0.5 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PV{I|L}T{I|L}{[QG]|[NA]};[{I|L}T]C(Carbamidomethyl (C))PV{I|L}T{I|L}{[QG]|[NA]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}P{I|L}VT{I|L}{[QG]|[NA]};[{I|L}T]C(Carbamidomethyl (C))P{I|L}VT{I|L}{[QG]|[NA]};[VP][SG]MV{I|L}T{I|L}{[QG]|[NA]};[{I|L}T]{I|L}MGSVPV{[QG]|[NA]};[{I|L}T][CG]PV{I|L}T{I|L}{[QG]|[NA]};[VP]VYGSVPV{[QG]|[NA]};[{I|L}T]{I|L}M[PA]GT{I|L}{[QG]|[NA]};[VP][SG]M{I|L}VT{I|L}{[QG]|[NA]} 3.805;3.5387;3.2579;2.9916;2.9891;2.912;2.706;2.6735;2.5732;2.442 -;-;-;-;-;-;-;-;-;- 1444 1 1.363 64786.4 1.0 10854 5658 16498 HBL1_DMSO_200M_050219_1,16514 HBL1_DMSO_200M_050219_1,16514,LNRDREWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16515 80.052 292.0 667220.0 25 0 62762.0 30931 RKFVVQLFAE 10 155 618.8612588985281 1235.7079648638562 2 618.8607055544853 MULTI CID FTMS 0 0 0 16498 364920.125 0.9550679571630236 1 -0.0558700561523437 17 Unmodified _RKFVVQLFAE_ ENSG00000066583|ENST00000173527|ISOC1 3.5964929083625545 0.7100006075494749 3 {I|L}{I|L}{I|L}M 4 9 17.423 0.0 0.0 1.4099 0.0 0.0 155.1085518773312 607.299030948972 762.4075828263033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L}M 1.4099 - 529 + 1 1.363 144070.0 1.0 10855 5658 16498 HBL1_DMSO_200M_050219_1,16515 HBL1_DMSO_200M_050219_1,16515,RKFVVQLFAE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16516 80.054 116.0 738000.0 25 0 75380.0 + 43867 YFNDIAVGAV 10 142 534.7696143848369 0 534.7753173708916 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _YFNDIAVGAV_ ENSG00000121579|ENST00000240922|NAA50 34.40172386719151 0.1703541587363112 3 {I|L}Y 2 9 7.9588 0.0 0.0 0.74554 0.0 0.0 415.2349552327613 373.1164135728674 788.3513688056287 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y 0.74554 - 372 + 1 1.363 76196.3 1.0 10856 5658 16498 HBL1_DMSO_200M_050219_1,16516 HBL1_DMSO_200M_050219_1,16516,YFNDIAVGAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16517 80.061 323.0 45271.0 25 0 3947.3 + 18101 KTKKHRQYLHS 11 44 713.4067870974541 0 713.4067870974541 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _KTKKHRQYLHS_ REV__ENSG00000277481|ENST00000620267|PKD1L3 1.0714618166137932 0.4761840153648598 3 A 1 -1 3.0989 0.0 0.0 0.2175 0.0 0.0 1127.6657337634642 223.0732363336547 1350.738970097119 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.2175 - 1 + 1 1.363 18919.9 1.0 10857 5658 16498 HBL1_DMSO_200M_050219_1,16517 HBL1_DMSO_200M_050219_1,16517,KTKKHRQYLHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16519 80.066 4.6 33359000.0 25 0 5723100.0 + 4629 DAYVLPKL 8 75 459.7681889261383 917.5218249190766 2 459.7684509158134 MULTI CID FTMS 0 0 0 16518 23342402.0 0.5128905982896969 -1 0.0558700561523437 1 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 39.957323273325 0.2350051964751539 3 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 + 66.43 0.0 0.0 7.2402 7.2402 84.059 0.0 0.0 0.0 18.86738949217053 3.010299956639805 3.010299956639805 3.010299956639805 0 1.1989700043360187 1.6989700043360187 0.0 0.2215141619232908 + + {[DA]|[EG]}YV{I|L}PK{I|L};{[DA]|[EG]}YV{I|L}P{I|L}K;{[DA]|[EG]}YV{I|L}{I|L}PK 7.2402;6.9121;6.2064 +;-;- + 83 + 1 1.363 123446.2 1.0 10858 5659 16518 HBL1_DMSO_200M_050219_1,16519 HBL1_DMSO_200M_050219_1,16519,DAYVLPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16520 80.067 27.0 5390200.0 25 0 391440.0 + 10522 FVDPAQITM 9 127 511.2545661416019 1020.4945793500038 2 511.2551147341728 MULTI CID FTMS 0 0 0 16518 4098205.5 0.7164493272129928 -1 0.0558700561523437 2 Unmodified _FVDPAQITM_ ENSG00000167325|ENST00000300738|RRM1 29.081581746732265 0.1611639662936252 3 [{M(Oxidation (M))|F}V]DPAQ{I|L}TM 9 0 + 51.277 0.0 0.0 5.0247 5.0247 73.396 0.0 0.0 0.0 0.5759878120609727 11.0827208845118 0.5759878120609727 0.5759878120609727 0 0.8935078169319297 1.3010299956639813 0.0 0.0 + + [{M(Oxidation (M))|F}V]DPAQ{I|L}TM;[{I|L}T]{M(Oxidation (M))|F}PAQ{I|L}TM;[PA]Q{I|L}T{M(Oxidation (M))|F}{I|L}TM;[{M(Oxidation (M))|F}V]DPA[AG]{I|L}TM;[{I|L}T]{M(Oxidation (M))|F}PA[AG]{I|L}TM;[PA]QD{M(Oxidation (M))|F}V{I|L}TM;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}QAP{M(Oxidation (M))|F}PV;[PA]Q{I|L}D{M(Oxidation (M))|F}VTM;[PA]QD{I|L}{M(Oxidation (M))|F}VTM;[{I|L}T][WE]Q{I|L}TM 5.0247;4.9683;4.2392;4.1224;4.0659;3.7517;3.7267;3.6992;3.6949;3.5536 +;-;-;-;-;-;-;-;-;- + 2532 1 1.363 113781.1 1.0 10859 5659 16518 HBL1_DMSO_200M_050219_1,16520 HBL1_DMSO_200M_050219_1,16520,FVDPAQITM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16521 80.068 30.0 3628100.0 25 0 221290.0 -1 LKSHMNLTSV 10 151 573.300677006193 1144.586801079186 2 573.3010742068291 MULTI CID FTMS 0 0 0 16518 2691897.25 0.0784695672792035 -3 0.2265777587890625 3 Oxidation (M) _LKSHM(Oxidation (M))NLTSV_ ENST00000490696.5_1_10:70916873-70916918:+|nuORF 26.268140514670165 0.3785003716575977 3 [H{I|L}]S{M(Oxidation (M))|F}{I|L}TSVGAN 11 -1 + 49.722 0.0 0.0 4.3441 4.3441 71.765 0.0 0.0 0.0 0.916664040077002 0.1722032235195314 0.1722032235195314 0.916664040077002 0 0.0172203223519532 0.9208187539523752 0.8851518780601924 0.0 [H{I|L}]S{M(Oxidation (M))|F}{I|L}TSVGAN;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}S{I|L}H{I|L}TSV;[H{I|L}]S{M(Oxidation (M))|F}{I|L}T{[QN]|[E{I|L}]|[KN]}W;[H{I|L}]S{I|L}{M(Oxidation (M))|F}TSVGAN;[H{I|L}]S{M(Oxidation (M))|F}{I|L}TWE{I|L};[H{I|L}]S{M(Oxidation (M))|F}{I|L}{[QN]|[E{I|L}]|[KN]}TW;[H{I|L}]S{I|L}{M(Oxidation (M))|F}T{[QN]|[E{I|L}]|[KN]}W;[H{I|L}]S{I|L}{M(Oxidation (M))|F}TWE{I|L};[H{I|L}]S{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}TW;[H{I|L}]S{I|L}T{M(Oxidation (M))|F}SVGAN 4.3441;4.264;4.1005;4.0811;4.0113;4.0001;3.8375;3.7483;3.7371;3.6208 -;-;-;-;-;-;-;-;-;- 2546 1 1.363 89764.1 1.0 10860 5659 16518 HBL1_DMSO_200M_050219_1,16521 HBL1_DMSO_200M_050219_1,16521,LKSHMNLTSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16522 80.072 195.0 2219700.0 25 0 134370.0 + + -1 YSVDRLYEL 9 185 579.274597923059 1156.534642912918 2 579.2749511599541 MULTI CID FTMS 0 0 0 16518 1430355.625 0.6911742383676784 3 -0.2885894775390625 4 Oxidation (M) _YSKM(Oxidation (M))EELEL_ ENSG00000084774|ENST00000264705|CAD 17.11289562659939 0.3734572693229295 3 [VP]VH{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}{I|L}{[QG]|[NA]} 10 -1 + 25.608 0.0 0.0 2.2142 2.2142 73.039 0.0 0.0 0.0 2.28337078708524 4.469026391079236 2.28337078708524 4.771212547196623 0 0.0 0.8239087409443188 0.8494850021680094 0.0 [VP]VH{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}[WQ]H{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};{I|L}{M(Oxidation (M))|F}YYV[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[Q{I|L}][WE]H{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[VP]VH{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}{[QG]|[NA]}{I|L};M[Y{M(Oxidation (M))|F}]GPE[{I|L}T]S{I|L};M[KG]{M(Oxidation (M))|F}H[C(Carbamidomethyl (C))H]Q{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[VP]VSGMYYE{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A{[CP]|[EA]}S{I|L} 2.2142;1.8016;1.6595;1.5414;1.4922;1.4753;1.4128;1.3585;1.3079;1.2835 -;-;-;-;-;-;-;-;-;- 3693 1 1.363 319105.8 1.0 10861 5659 16518 HBL1_DMSO_200M_050219_1,16522 HBL1_DMSO_200M_050219_1,16522,YSKMEELEL False False YSVDRLYEL 80.071832 579.274951159954 11881496.0 16518.0 ENSG00000084774|ENST00000264705|CAD 2.864297151565552 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16523 80.076 208.0 735860.0 25 0 81810.0 9347 FILMTWTVLK 10 131 626.3613996006916 1250.708246268183 2 626.3619262576103 MULTI CID FTMS 0 0 0 16518 1238948.625 0.587324743372531 -4 0.3107986450195312 5 Unmodified _FILMTWTVLK_ L1MC3_dup7320|chrX:70161794-70162664:+|1.112392509996284|0.2551508396873335|2.12|48.0|58|3|anti-sense 6.723162845929126 0.6955379296933136 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ASV 5 8 19.833 0.0 0.0 1.5857 0.0 0.0 0.0 731.3951484942014 731.3951484942014 11.010523457102993 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ASV 1.5857 - 162 + 1 1.363 115115.0 1.0 10862 5659 16518 HBL1_DMSO_200M_050219_1,16523 HBL1_DMSO_200M_050219_1,16523,FILMTWTVLK False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 16524 80.081 273.0 1232400.0 25 0 103590.0 + 41804 VPVSGMQPPMT 11 170 381.8563299297026 1142.547160389308 3 381.8561279177666 MULTI CID FTMS 0 0 0 16518 830106.8125 0.5856465821909623 2 -0.2024459838867187 6 Unmodified _VPVSGMQPPMT_ REV__nc|ENSG00000073921|Q13492-2|PICALM 17.11289562659939 0.6791789249425932 3 [{I|L}T]EH[QA]S 7 -1 18.913 0.0 0.0 1.6553 0.0 0.0 0.0 373.1587440779204 373.1587440779204 -4.855346690696713 0.0 -4.855346690696713 0.0 0 0.0 0.6575773191777937 1.329689690656103 0.0 [{I|L}T]EH[QA]S 1.6553 - 1367 1 1.363 266837.3 1.0 10863 5659 16518 HBL1_DMSO_200M_050219_1,16524 HBL1_DMSO_200M_050219_1,16524,VPVSGMQPPMT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16525 80.087 322.0 1072900.0 25 0 82618.0 + 26653 NYIDRFLSSM 10 205 631.2973557852757 1260.5801586373514 2 631.2972900271416 MULTI CID FTMS 0 0 0 16518 621687.5 0.3028572343724053 -1 0.0558700561523437 7 Oxidation (M) _NYIDRFLSSM(Oxidation (M))_ ENSG00000145386|ENST00000274026|CCNA2 150.61878029816774 4.2759518620235246e-05 3 NY{I|L}DR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F} 10 0 + 115.76 0.0 0.0 9.1827 9.1827 97.049 0.0 0.0 0.0 99.95358466288572 13.010299956639813 13.010299956639813 16.690840781556204 0 2.973197507588033 2.0 1.5669015600442575 0.0 + + NY{I|L}DR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F};[YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F};[YN]{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}SS{M(Oxidation (M))|F};NY{I|L}D[HD]{I|L}[KP]{M(Oxidation (M))|F};NY[{M(Oxidation (M))|F}V]{[RE]|[WV]}{I|L}SS{M(Oxidation (M))|F};[YN]{I|L}{I|L}{[MG]|[TS]}{[ET]|[MV]}SS{M(Oxidation (M))|F};[YN]{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RDS{M(Oxidation (M))|F};NY{I|L}M{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L}S{M(Oxidation (M))|F};[YN]{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DRS{M(Oxidation (M))|F};[YN]{I|L}{I|L}K[WY]D{M(Oxidation (M))|F} 9.1827;7.8587;7.1285;6.3314;6.3014;5.8887;5.6719;5.6034;5.5486;5.2905 +;+;-;-;-;-;-;-;-;- + 12284 + 1 1.363 251512.8 1.0 10864 5659 16518 HBL1_DMSO_200M_050219_1,16525 HBL1_DMSO_200M_050219_1,16525,NYIDRFLSSM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16526 80.093 333.0 956590.0 25 0 98924.0 + 19166 LEDPVAPPL 9 164 475.7634460410517 949.5123391489036 2 475.7638732790947 MULTI CID FTMS 0 0 0 16518 584266.25 0.4237483204430938 2 -0.2024459838867187 8 Unmodified _LEDPVAPPL_ REV__ENSG00000178685|ENST00000313028|PARP10;REV__ENST00000528580.1_1_8:145060208-145060527:-|nuORF 28.486842064014134 0.1687311288560894 3 {[VA]|[{I|L}G]}H{M(Oxidation (M))|F}AV 6 -1 32.625 0.0 0.0 3.4359 0.0 0.0 0.0 322.1763765847035 322.1763765847035 6.919076829902153 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[VA]|[{I|L}G]}H{M(Oxidation (M))|F}AV 3.4359 - 1001 1 1.363 241581.0 1.0 10865 5659 16518 HBL1_DMSO_200M_050219_1,16526 HBL1_DMSO_200M_050219_1,16526,LEDPVAPPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16527 80.099 354.0 1035100.0 25 0 125020.0 35301 SSRDQPLP 8 217 450.2343639511818 898.4541749691637 2 450.2346984744072 MULTI CID FTMS 0 0 0 16518 523621.65625 0.5341416426700928 2 -0.2024459838867187 9 Unmodified _SSRDQPLP_ ENST00000555222.5_1_12:57490357-57492756:-|nuORF 28.486842064014134 0.4448922141344407 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSGQP[{I|L}P] 9 5 + 43.667 0.0 0.0 4.8603 4.8603 84.948 0.0 0.0 0.0 11.564463568986604 5.642492736872597 5.642492736872597 10.272657074340898 0 1.0 1.3979400086720375 1.2302046884880935 0.3494850021680094 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSGQP[{I|L}P];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NS]QP[{I|L}P];[PG]S{M(Oxidation (M))|F}GQP[{I|L}P];{[QG]|[NA]}PYQP[{I|L}P];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSG[AG]P[{I|L}P];[PG]{M(Oxidation (M))|F}SGQP[{I|L}P];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GQ[SG]P[{I|L}P];{[QG]|[NA]}P{M(Oxidation (M))|F}[SG]P[{I|L}P];[AG]GPYQP[{I|L}P];{[QG]|[NA]}P[SG]{M(Oxidation (M))|F}P[{I|L}P] 4.8603;3.7169;3.5731;3.4547;3.4464;3.1934;2.999;2.9058;2.8406;2.6873 -;-;-;-;-;-;-;-;-;- 1225 1 1.363 277414.2 1.0 10866 5659 16518 HBL1_DMSO_200M_050219_1,16527 HBL1_DMSO_200M_050219_1,16527,SSRDQPLP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16528 80.106 409.0 444720.0 25 0 83365.0 + -1 PSLCLKWRPLK 11 163 699.4082853715669 1396.8020178099337 2 699.4084960818291 MULTI CID FTMS 0 0 0 16518 418660.96875 0.725927618511753 3 -0.2885894775390625 10 Carbamidomethyl (C) _PSLC(Carbamidomethyl (C))LKWRPLK_ REV__ENST00000450453.6_2_1:163292807-163295872:+|nuORF;REV__ENST00000524800.5_1_1:163291810-163295872:+|nuORF 2.9952420565917617 0.861016188266951 3 Y 1 -1 9.5329 0.0 0.0 0.68248 0.0 0.0 1215.7274003556352 0.0 1215.7274003556352 0.0 0.6071108144273119 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.68248 - 190 + 1 1.363 145100.0 1.0 10867 5659 16518 HBL1_DMSO_200M_050219_1,16528 HBL1_DMSO_200M_050219_1,16528,PSLCLKWRPLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16529 80.115 511.0 392060.0 25 0 105480.0 -1 0 116 1016.1426258711776 3045.4060482137324 3 1016.482592761517 MULTI CID FTMS 0 0 0 16518 300058.34375 0.5396961516916803 -3 0.2265777587890625 11 3 {I|L}[{I|L}P]D{M(Oxidation (M))|F}{I|L}[NP]M{[QD]|[EN]|[WG]|[KD]|[RS]} 11 -1 31.114 0.0 0.0 1.0217 0.0 0.0 1743.8301136101622 0.0 1743.8301136101622 0.0 10.250004302775547 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}[{I|L}P]D{M(Oxidation (M))|F}{I|L}[NP]M{[QD]|[EN]|[WG]|[KD]|[RS]} 1.0217 - 1153 1 1.363 141064.4 1.0 10868 5659 16518 HBL1_DMSO_200M_050219_1,16529 HBL1_DMSO_200M_050219_1,16529, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16530 80.124 508.0 1450200.0 25 0 59358.0 + 32626 SAYGPGLVSI 10 120 963.5131497082796 962.5058732416794 1 963.5155517458916 MULTI CID FTMS 0 0 0 16518 280993.53125 0.1569723806743278 -3 0.2265777587890625 12 Unmodified _SAYGPGLVSI_ ENSG00000079819|ENST00000337057|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2 71.92227651296345 0.0188747003512554 3 [PG]{I|L}VGSYAS{I|L} 10 8 + 51.252 0.0 0.0 5.3248 5.3248 56.796 0.0 0.0 0.0 4.884381005764311 19.71667910879476 4.884381005764311 0.0 0 0.2614393726401688 0.0 0.8494850021680094 0.0 [PG]{I|L}VGSYAS{I|L};[PG]{I|L}VGYSAS{I|L};[PG]{I|L}VGYTGS{I|L};[PG]{I|L}VGSAYS{I|L};[PG]{I|L}GVSYAS{I|L};[PG]{I|L}GVYSAS{I|L};[PG]{I|L}GVYTGS{I|L};[PG]{I|L}GVSAYS{I|L};[PG]{I|L}VSGYAS{I|L};[PG]{I|L}GYVSAS{I|L} 5.3248;5.3248;5.1639;5.1209;5.0121;5.0121;4.8512;4.8081;4.6993;4.6993 -;-;-;-;-;-;-;-;-;- 7752 1 1.363 459417.7 1.0 10869 5659 16518 HBL1_DMSO_200M_050219_1,16530 HBL1_DMSO_200M_050219_1,16530,SAYGPGLVSI True True SAYGPGLVSI 80.124486 963.515551745892 18284386.5 16518.0 nc|ENSG00000079819|O43491-3|EPB41L2;;nc|ENSG00000079819|O43491-2|EPB41L2;;nc|ENSG00000079819|O43491-4|EPB41L2;;ENSG00000079819|ENST00000337057|EPB41L2 6.359419822692871 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16531 80.133 429.0 981120.0 25 0 52437.0 28017 PMSYTHRSL 9 239 546.2680972882638 1090.5216416433277 2 546.2717773318291 MULTI CID FTMS 0 0 0 16518 266925.84375 0.3196387243620174 -1 0.0558700561523437 13 Unmodified _PMSYTHRSL_ nc|ENSG00000235818|Q8TDU5|VN1R17P 26.88365393820708 0.1891292719743517 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}VY{I|L}T 8 7 54.533 0.0 0.0 5.0006 0.0 0.0 0.0 156.96973669631498 156.96973669631498 24.791654403529897 0.0 0.0 0.0 0 1.3494850021680094 1.5228787452803376 0.555462187404089 0.7059771852360797 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}VY{I|L}T 5.0006 - 4294 1 1.363 328373.7 1.0 10870 5659 16518 HBL1_DMSO_200M_050219_1,16531 HBL1_DMSO_200M_050219_1,16531,PMSYTHRSL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16532 80.136 140.0 1209900.0 25 0 139610.0 21298 LPELRSLL 8 151 470.7944712456425 939.574389558085 2 470.7944518923759 MULTI CID FTMS 0 0 0 16518 262196.625 0.4941605099983038 -3 0.2265777587890625 14 Unmodified _LPELRSLL_ ENSG00000215845|ENST00000423014|TSTD1;ENST00000486084.1_1_1:161008305-161008679:-|nuORF;nc|ENSG00000215845|Q8NFU3-3|TSTD1;nc|ENSG00000215845|Q8NFU3-4|TSTD1 24.67388899826682 0.525179942228231 3 EP{I|L}{I|L}T[RV]{I|L} 8 5 + 39.236 0.0 0.0 4.176 4.176 72.653 0.0 0.0 0.0 15.730231979947646 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.0 0.8239087409443188 0.5114393726401688 0.0 EP{I|L}{I|L}T[RV]{I|L};EP{I|L}{I|L}T[R{I|L}]V;EP{I|L}{I|L}[RV]T{I|L} 4.176;3.9886;3.7872 -;-;- 729 + 1 1.363 130890.1 1.0 10871 5659 16518 HBL1_DMSO_200M_050219_1,16532 HBL1_DMSO_200M_050219_1,16532,LPELRSLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16533 80.148 667.0 243540.0 25 0 28210.0 + -1 LSTDMLEMCI 10 200 594.2553221062653 1186.4960912793306 2 594.2574951052666 MULTI CID FTMS 0 0 0 16518 223987.28125 0.0708510536924905 -7 0.6146316528320312 15 2 Oxidation (M) _LSTDM(Oxidation (M))LEM(Oxidation (M))CI_ REV__ENSG00000034152|ENST00000342679|MAP2K3;REV__ENSG00000108984|ENST00000590474|MAP2K6;REV__ENST00000586641.5_1_17:67411125-67517252:+|nuORF;REV__nc|ENSG00000034152|P46734-2|MAP2K3;REV__nc|ENSG00000034152|P46734-3|MAP2K3;REV__nc|ENSG00000108984|P52564-2|MAP2K6 18.1463463914782 0.5430639438673815 3 {[TV]|[{I|L}S]}TD 4 -1 37.278 0.0 0.0 3.1419 0.0 0.0 0.0 767.2807317690919 767.2807317690919 25.85850671454033 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3874377229201597 0.0 {[TV]|[{I|L}S]}TD 3.1419 + + 955 1 1.363 119935.3 1.0 10872 5659 16518 HBL1_DMSO_200M_050219_1,16533 HBL1_DMSO_200M_050219_1,16533,LSTDMLEMCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16534 80.16 696.0 216910.0 25 0 21030.0 -1 EMGDDCNCPCD 11 166 637.6730972978802 0 637.3354369997978 PEAK CID FTMS 0 0 0 16518 109239.734375 0.5447997283226166 3 -0.2885894775390625 16 Carbamidomethyl (C),Oxidation (M) _EM(Oxidation (M))GDDC(Carbamidomethyl (C))NCPCD_ ENSG00000135272|ENST00000393486|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;nc|ENSG00000135272|Q9P1T7-1|MDFIC 0.0 0.4761840153648598 3 {I|L} 1 -1 5.4846 0.0 0.0 0.43072 0.0 0.0 636.9428656547577 520.2817476861936 1157.2246133409512 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.43072 - 222 + 1 1.363 115897.3 1.0 10873 5659 16518 HBL1_DMSO_200M_050219_1,16534 HBL1_DMSO_200M_050219_1,16534,EMGDDCNCPCD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16535 80.173 712.0 240450.0 25 0 6888.6 + 41222 VPFESPRYLQV 11 174 667.8589965701103 0 667.8589965701103 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _VPFESPRYLQV_ ENSG00000187741|ENST00000389301|FANCA;nc|ENSG00000187741|O15360-3|FANCA 33.4449034751529 0.1938147417151705 3 P{M(Oxidation (M))|F}ES 4 7 29.438 0.0 0.0 2.2073 0.0 0.0 99.0659848718047 771.4193300395929 870.4853149113976 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 + P{M(Oxidation (M))|F}ES 2.2073 + + 603 + 1 1.363 127932.6 1.0 10874 5659 16518 HBL1_DMSO_200M_050219_1,16535 HBL1_DMSO_200M_050219_1,16535,VPFESPRYLQV False True VPFESPRYLQV 80.173381 667.85899657011 3634182.0 16518.0 nc|ENSG00000187741|O15360-3|FANCA;;ENSG00000187741|ENST00000389301|FANCA 6.493130207061768 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16536 80.184 630.0 247860.0 25 0 28859.0 + 29882 QRLPRTKTPP 10 169 398.5746761598233 0 398.5753661990166 PEAK CID FTMS 0 0 0 16518 192265.875 0.566672567483454 -3 0.2265777587890625 18 Unmodified _QRLPRTKTPP_ REV__ENSG00000100395|ENST00000216237|L3MBTL2;REV__ENST00000452106.5_1_22:41623607-41626252:+|nuORF;REV__ENST00000466589.5_1_22:41623698-41626252:+|nuORF 6.2057823575117 0.3961065659209838 3 PV 2 -1 7.0783 0.0 0.0 0.89021 0.0 0.0 112.69472395339967 483.2953280084594 595.9900519618591 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PV 0.89021 - 20 + 1 1.363 129155.1 1.0 10875 5659 16518 HBL1_DMSO_200M_050219_1,16536 HBL1_DMSO_200M_050219_1,16536,QRLPRTKTPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16537 80.195 618.0 285720.0 25 0 14382.0 + 23857 LVIQKYWRR 9 186 421.2555858067264 1260.7449280203791 3 421.2555724978447 MULTI CID FTMS 0 0 0 16518 175105.25 0.13276644544328 6 -0.45233154296875 19 Unmodified _LVIQKYWRR_ ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM 15.847184025352805 0.4077185912009129 3 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 7 + 100.65 0.0 0.0 7.9835 7.9835 92.633 0.0 0.0 0.0 36.532125137753454 13.010299956639813 13.010299956639813 9.164539485499262 0 0.6139829889124311 2.0 0.0 0.2396518287104437 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HRH;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HRH;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}{[ET]|[MV]}TV;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}{[ET]|[MV]}S{I|L};{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{[WT]|[RM]}KK;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}{[ET]|[MV]}TV;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}{[ET]|[MV]}S{I|L};{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{[WT]|[RM]}KK 7.9835;7.2566;6.9516;6.2247;5.2778;5.2502;5.0718;4.5538;4.5262;4.3449 -;-;-;-;-;-;-;-;-;- 1431 + 1 1.363 153786.2 1.0 10876 5659 16518 HBL1_DMSO_200M_050219_1,16537 HBL1_DMSO_200M_050219_1,16537,LVIQKYWRR False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16538 80.204 447.0 256560.0 25 0 17847.0 + -1 MLINQDKIEYP 11 152 690.3481681038473 0 690.3553344607353 PEAK CID FTMS 0 0 0 -1 0 20 Oxidation (M) _M(Oxidation (M))LINQDKIEYP_ REV__ENST00000586142.5_1_18:43310001-43310190:+|nuORF 11.494710602746466 0.4364593389169961 3 VGW{I|L}D 5 -1 23.487 0.0 0.0 1.7036 0.0 0.0 707.3524508543759 98.02581201724844 805.3782628716243 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5484550065040282 0.0 VGW{I|L}D 1.7036 - 408 + 1 1.363 88691.3 1.0 10877 5659 16518 HBL1_DMSO_200M_050219_1,16538 HBL1_DMSO_200M_050219_1,16538,MLINQDKIEYP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16540 80.208 5.0 5264700.0 25 0 678760.0 + 37302 TIRYPDPLI 9 52 544.3109498194198 1086.6073467056394 2 544.3118163943291 MULTI CID FTMS 0 0 0 16539 14233756.0 0.4530948686269748 -3 0.2693328857421875 1 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 26.268140514670165 0.1969607489560049 3 P{I|L}{I|L} 3 6 31.242 0.0 0.0 2.8752 0.0 0.0 745.3776677369962 0.0 745.3776677369962 0.0 18.14326570884305 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + P{I|L}{I|L} 2.8752 + + 11 1 1.308 27665.9 1.0 10878 5660 16539 HBL1_DMSO_200M_050219_1,16540 HBL1_DMSO_200M_050219_1,16540,TIRYPDPLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16541 80.21 58.0 1024400.0 25 0 76793.0 + 12235 GQWASVIRV 9 80 508.2879893005764 1014.5614256679528 2 508.2885619997978 MULTI CID FTMS 0 0 0 16539 1043272.375 0.2486062146527135 3 -0.1916885375976562 2 Unmodified _GQWASVIRV_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000562722.1_1_16:70597761-70599451:+|nuORF;nc|ENSG00000189091|Q15393-3|SF3B3 45.69961567697781 0.0497987121815769 3 {[QG]|[NA]}WASV{I|L}[RV] 9 0 + 62.074 0.0 0.0 6.1183 6.1183 81.046 0.0 0.0 0.0 7.147642715192504 11.33823530010693 7.147642715192504 3.0102999566398125 0 0.8807196863200843 0.0 0.4247425010840047 0.7134679910804405 + + {[QG]|[NA]}WASV{I|L}[RV];{[QG]|[NA]}WAVS{I|L}[RV];{[QG]|[NA]}WVAS{I|L}[RV];{[QG]|[NA]}WASV[RV]{I|L};{[QG]|[NA]}WAVS[RV]{I|L};{[QG]|[NA]}WVAS[RV]{I|L} 6.1183;5.8216;5.5248;5.0007;4.704;4.4073 +;-;-;-;-;- + 139 + 1 1.308 51174.9 1.0 10879 5660 16539 HBL1_DMSO_200M_050219_1,16541 HBL1_DMSO_200M_050219_1,16541,GQWASVIRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16542 80.211 4.9 11636000.0 25 0 2558300.0 + 40696 IPRSITVLV 9 68 499.3237451479776 996.6329373627552 2 499.3240844607353 MULTI CID FTMS 0 0 0 16539 13498976.0 0.4182850412959218 -2 0.1984634399414062 3 Unmodified _VLGERIVIV_ nc|ENSG00000166508|P33993-3|MCM7;nc|ENSG00000166508|P33993-2|MCM7;ENSG00000166508|ENST00000303887|MCM7;ENST00000463722.5_1_7:99695745-99696843:-|nuORF 29.081581746732265 0.1611639662936252 3 TV{I|L}V 4 6 40.745 0.0 0.0 4.0883 0.0 0.0 566.3571758475484 0.0 566.3571758475484 0.0 23.809647398868847 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 TV{I|L}V 4.0883 - 88 1 1.308 50575.8 1.0 10880 5660 16539 HBL1_DMSO_200M_050219_1,16542 HBL1_DMSO_200M_050219_1,16542,VLGERIVIV False True IPRSITVLV 80.210946 499.324084460735 173417472.0 16539.0 nc|ENSG00000166508|P33993-3|MCM7;;nc|ENSG00000166508|P33993-2|MCM7;;ENSG00000166508|ENST00000303887|MCM7;;ENST00000463722.5_1_7:99695745-99696843:-|nuORF 5.682739734649658 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16543 80.212 5.5 14520000.0 25 0 3770700.0 + 31555 RQLESLIRL 9 59 564.3476733096935 1126.680793686187 2 564.3480102419853 MULTI CID FTMS 0 0 0 16539 10766982.0 0.8053110377908935 -2 0.1984634399414062 4 Unmodified _RQLESLIRL_ ENSG00000104738|ENST00000649973|MCM4;ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 12.174745833636583 0.5071271664557081 3 {I|L}{I|L}S 3 7 15.802 0.0 0.0 1.4025 0.0 0.0 287.19123942889684 523.2647799127561 810.456019341653 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{I|L}S 1.4025 - 16 + 1 1.308 64231.1 1.0 10881 5660 16539 HBL1_DMSO_200M_050219_1,16543 HBL1_DMSO_200M_050219_1,16543,RQLESLIRL False True RQLESLIRL 80.212123 564.3484 152463888.0 16539.0 nc|ENSG00000125885|Q9UJA3-2|MCM8;;ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;ENSG00000104738|ENST00000649973|MCM4 4.66161831219991 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16544 80.213 9.6 6598700.0 25 0 1498500.0 + 12396 GTIGLIHAI 9 89 447.7733977839752 893.5322426347504 2 447.7740356326103 MULTI CID FTMS 0 0 0 16539 4384654.0 1.0 0 0.0 5 Unmodified _GTIGLIHAI_ ENSG00000118939|ENST00000377595|UCHL3;ENST00000563635.5_1_13:76123956-76287321:+|nuORF 40.44857923139169 0.0729940656229577 3 {[SA]|[TG]}{I|L}G{I|L}{I|L}[HA]{I|L} 9 0 + 43.043 0.0 0.0 4.8172 4.8172 82.386 0.0 0.0 0.0 20.647124887093824 2.632192780232785 2.632192780232785 8.450980400142562 0 0.2742275032520141 1.6989700043360187 0.0 0.0 + + {[SA]|[TG]}{I|L}G{I|L}{I|L}[HA]{I|L};{[SA]|[TG]}{I|L}G{I|L}[HA]{I|L}{I|L} 4.8172;3.8714 +;- + 230 + 1 1.308 53437.9 1.0 10882 5660 16539 HBL1_DMSO_200M_050219_1,16544 HBL1_DMSO_200M_050219_1,16544,GTIGLIHAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16545 80.214 15.0 4325300.0 25 0 538400.0 + 14625 IIIPEIQKV 9 79 526.8391643272683 1051.6637757213366 2 526.8395263552666 MULTI CID FTMS 0 0 0 16539 4266477.5 0.3419361470048672 -6 0.481964111328125 6 Unmodified _IIIPEIQKV_ ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;nc|ENSG00000124207|P55060-3|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L 24.020572477871973 0.2255576514309169 3 {I|L}{I|L}{I|L}PE{I|L}QKV 9 0 + 49.712 0.0 0.0 4.727 4.727 83.438 0.0 0.0 0.0 24.30587907065561 8.55330408149566 8.55330408149566 9.208187539523747 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + + {I|L}{I|L}{I|L}PE{I|L}QKV;{I|L}{I|L}{I|L}PE{I|L}[AG]KV 4.727;3.8514 +;- + 140 + 1 1.308 54687.7 1.0 10883 5660 16539 HBL1_DMSO_200M_050219_1,16545 HBL1_DMSO_200M_050219_1,16545,IIIPEIQKV False True IIIPEIQKV 80.214481 526.839526355267 502385472.0 16539.0 ENSG00000124207|ENST00000262982|CSE1L;;nc|ENSG00000124207|P55060-4|CSE1L;;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;;nc|ENSG00000124207|P55060-3|CSE1L 5.1517893473307295 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16546 80.216 18.0 6787300.0 25 0 900740.0 + 31556 RQLESLIRL 9 104 376.567936164714 1126.681979094342 3 376.5678283572197 MULTI CID FTMS 0 0 0 16539 3400721.25 0.8919655538259174 -2 0.1984634399414062 7 Unmodified _RQLESLIRL_ ENSG00000104738|ENST00000649973|MCM4;ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 85.64151623876279 0.0161498729896241 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}ES{I|L}{I|L}{I|L}R 9 2 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L} + + 53.111 17.517 4.4097 4.7139 4.7139 54.704 0.0 0.0 0.0 0.0 32.12306216161936 0.0 0.0 0 1.3494850021680094 0.0 0.7887254899964358 0.6237125054200234 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}ES{I|L}{I|L}{I|L}R 4.7139 - 283 + 1 1.308 99715.6 1.0 10884 5660 16539 HBL1_DMSO_200M_050219_1,16546 HBL1_DMSO_200M_050219_1,16546,RQLESLIRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16547 80.217 19.0 2753600.0 25 0 326000.0 + 10033 FPNIHPPQI 9 85 531.7899207646715 1061.5652885961429 2 531.7899658083916 MULTI CID FTMS 0 0 0 16539 2596607.0 0.9286673225306814 -2 0.1984634399414062 8 Unmodified _FPNIHPPQI_ ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-3|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 68.08070601005525 0.0218408846571049 3 {M(Oxidation (M))|F}PVQHPPQ{I|L} 9 2 + 68.887 0.0 0.0 6.4892 6.4892 89.282 0.0 0.0 0.0 44.42261926073115 22.708574303152176 22.708574303152176 9.208187539523747 0 1.3494850021680094 0.0 0.0 0.6109243748081782 {M(Oxidation (M))|F}PVQHPPQ{I|L};{M(Oxidation (M))|F}PV[AG]HPPQ{I|L};{M(Oxidation (M))|F}PVQHPP[AG]{I|L};{M(Oxidation (M))|F}PV[AG]HPP[AG]{I|L};{M(Oxidation (M))|F}PVQHPPAAV;{M(Oxidation (M))|F}PV[AG]HPPAAV;{M(Oxidation (M))|F}PV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[DS]|[MA]|[CV]|TT}Q{I|L};[NP]{I|L}H{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VPE;[QP]VH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VPE;[VP]QH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VPE 6.4892;5.6217;5.0462;4.1829;3.9305;3.0672;2.8064;2.596;2.2494;2.0645 -;-;-;-;-;-;-;-;-;- 215 + 1 1.308 49070.5 1.0 10885 5660 16539 HBL1_DMSO_200M_050219_1,16547 HBL1_DMSO_200M_050219_1,16547,FPNIHPPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16548 80.218 61.0 2912200.0 25 0 395880.0 -1 0 98 336.1043917088872 670.1942304845744 2 336.1048461794853 MULTI CID FTMS 0 0 0 16539 2140233.25 0.2303816178518975 -3 0.2693328857421875 9 3 {[CP]|[EA]}S 3 -1 10.942 0.0 0.0 1.6327 0.0 0.0 0.0 380.0749909256232 380.0749909256232 6.962724883926656 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[CP]|[EA]}S 1.6327 - 7 + 1 1.308 145010.8 1.0 10886 5660 16539 HBL1_DMSO_200M_050219_1,16548 HBL1_DMSO_200M_050219_1,16548, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16549 80.22 34.0 1486200.0 25 0 170520.0 + 3385 AYQSIQNYL 9 98 550.2746281726695 1098.534703412139 2 550.2745239138603 MULTI CID FTMS 0 0 0 16539 1100110.375 0.5789257439748593 -2 0.1984634399414062 10 Unmodified _AYQSIQNYL_ ENSG00000134109|ENST00000256497|EDEM1;nc|ENSG00000134109|Q92611-2|EDEM1 26.88365393820708 0.1891292719743517 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QSR[QA][Y{I|L}] 9 2 + 41.589 0.0 0.0 3.7859 3.7859 69.342 0.0 0.0 0.0 12.688324713653074 21.45119965945284 12.688324713653074 0.4575749056067479 0 0.4247425010840047 2.0 0.5 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QSR[QA][Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GASR[QA][Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QRS[QA][Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GARS[QA][Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QS[VG][QA][Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GAS[VG][QA][Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[VG]S[QA][Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA[VG]S[QA][Y{I|L}];[YQ]ASR[QA][Y{I|L}];{[QS]|[NT]}{M(Oxidation (M))|F}SR[QA][Y{I|L}] 3.7859;3.7442;3.3307;3.2891;2.9477;2.91;2.4925;2.4548;1.7633;1.567 -;-;-;-;-;-;-;-;-;- 514 1 1.308 45540.8 1.0 10887 5660 16539 HBL1_DMSO_200M_050219_1,16549 HBL1_DMSO_200M_050219_1,16549,AYQSIQNYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16550 80.221 70.0 1291300.0 25 0 94643.0 9024 FDNFSSLSIQ 10 92 386.51928844473525 1156.5360359344058 3 386.5191833376884 MULTI CID FTMS 0 0 0 16539 894963.0 0.3019617528541626 4 -0.26336669921875 11 Unmodified _FDNFSSLSIQ_ ENSG00000132182|ENST00000254508|NUP210;ENST00000479519.5_1_3:13393312-13395748:-|nuORF;nc|ENSG00000132182|Q8TEM1-2|NUP210 9.38312468134398 0.6832340498775793 3 V{I|L}{M(Oxidation (M))|F} 3 9 23.188 0.0 0.0 2.0049 0.0 0.0 0.0 794.3085438799494 794.3085438799494 2.7422750325201406 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}{M(Oxidation (M))|F} 2.0049 - 97 + 1 1.308 85712.7 1.0 10888 5660 16539 HBL1_DMSO_200M_050219_1,16550 HBL1_DMSO_200M_050219_1,16550,FDNFSSLSIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16551 80.226 281.0 1374300.0 25 0 443910.0 -1 0 97 1142.4826224881576 3424.426038064673 3 1142.815722644329 MULTI CID FTMS 0 0 0 16539 867683.75 0.2939521191576896 -3 0.2693328857421875 12 3 {I|L}ET 3 -1 14.838 0.0 0.0 0.4333 0.0 0.0 2165.7592193631035 912.4883547674286 3078.247574130532 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 {I|L}ET 0.4333 - 476 + 1 1.308 264534.4 1.0 10889 5660 16539 HBL1_DMSO_200M_050219_1,16551 HBL1_DMSO_200M_050219_1,16551, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16552 80.231 242.0 444420.0 25 0 39502.0 + 24487 MIGEIPQLIVR 11 116 634.875212515245 1267.73587209729 2 634.8749267458916 MULTI CID FTMS 0 0 0 16539 826622.0625 1.0 0 0.0 13 Unmodified _MIGEIPQLIVR_ REV__ENSG00000105426|ENST00000262963|PTPRS;REV__ENST00000588552.5_1_19:5159112-5286160:-|nuORF;REV__nc|ENSG00000105426|Q13332-2|PTPRS;REV__nc|ENSG00000105426|Q13332-3|PTPRS;REV__nc|ENSG00000105426|Q13332-4|PTPRS;REV__nc|ENSG00000105426|Q13332-5|PTPRS;REV__nc|ENSG00000105426|Q13332-6|PTPRS;REV__nc|ENSG00000105426|Q13332-7|PTPRS 3.5964929083625545 0.858179447565866 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QD 4 -1 14.87 0.0 0.0 1.173 0.0 0.0 0.0 777.5138316522306 777.5138316522306 4.0325698376995245 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QD 1.173 - 193 1 1.308 85961.2 1.0 10890 5660 16539 HBL1_DMSO_200M_050219_1,16552 HBL1_DMSO_200M_050219_1,16552,MIGEIPQLIVR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16553 80.232 55.0 920770.0 25 0 59194.0 + 4233 DAPLDLKI 8 85 442.7577300009432 883.5009070686865 2 442.7583495974541 MULTI CID FTMS 0 0 0 16539 789534.6875 1.0 0 0.0 14 Unmodified _DAPLDLKI_ ENSG00000119685|ENST00000298832|TTLL5;ENST00000555422.5_1_14:76198560-76243086:+|nuORF 24.020572477871973 0.5389365498350341 3 {[DA]|[EG]}{I|L}PD{I|L}K{I|L} 8 2 + 55.544 0.0 0.0 6.2868 6.2868 84.828 0.0 0.0 0.0 15.70107520596089 12.5190243216651 12.5190243216651 5.496812376923046 0 0.3494850021680094 1.6989700043360187 0.4247425010840047 0.0 {[DA]|[EG]}{I|L}PD{I|L}K{I|L};{[DA]|[EG]}P{I|L}D{I|L}K{I|L} 6.2868;5.6647 -;+ + 139 + 1 1.308 45297.9 1.0 10891 5660 16539 HBL1_DMSO_200M_050219_1,16553 HBL1_DMSO_200M_050219_1,16553,DAPLDLKI False True DAPLDLKI 80.232331 442.758349597454 4718191.5 16539.0 ENST00000555422.5_1_14:76198560-76243086:+|nuORF;;ENSG00000119685|ENST00000298832|TTLL5 3.440475066502889 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16554 80.238 287.0 382840.0 25 0 48321.0 20636 LLPRRDRALT 10 128 605.871667653729 1209.728782374258 2 605.8727905154228 MULTI CID FTMS 0 0 0 16539 572238.8125 1.0 0 0.0 15 Unmodified _LLPRRDRALT_ ENSG00000138035|ENST00000447944|PNPT1 10.073929032068715 0.6785112666868882 3 {I|L}{I|L}NDAW[RV]{I|L} 9 6 40.709 0.0 0.0 3.3651 0.0 0.0 111.1288811064829 0.0 111.1288811064829 0.0 23.084268955476343 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.5629529932484498 {I|L}{I|L}NDAW[RV]{I|L} 3.3651 - 185 + 1 1.308 81801.1 1.0 10892 5660 16539 HBL1_DMSO_200M_050219_1,16554 HBL1_DMSO_200M_050219_1,16554,LLPRRDRALT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16555 80.243 290.0 355240.0 25 0 63049.0 + 43293 WKIRLHGFPSL 11 110 677.3950112965572 1352.7754696599145 2 677.3947021365166 MULTI CID FTMS 0 0 0 16539 577860.1875 0.2881820991004037 -12 1.0651321411132812 16 Unmodified _WKIRLHGFPSL_ REV__ENST00000590121.1_1_19:12918336-12918396:+|nuORF 8.745405648335112 0.8338865417133445 3 TPS{I|L} 4 -1 23.613 0.0 0.0 1.7455 0.0 0.0 936.5472746285484 0.0 936.5472746285484 0.0 -3.9991891735897234 -3.9991891735897234 0.0 0 0.0 0.0 1.0 0.0 TPS{I|L} 1.7455 - 213 + 1 1.308 85140.3 1.0 10893 5660 16539 HBL1_DMSO_200M_050219_1,16555 HBL1_DMSO_200M_050219_1,16555,WKIRLHGFPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16556 80.249 317.0 428610.0 25 0 35692.0 + 14414 IFLDSKGLEY 10 142 592.8139569168353 1183.6133609004703 2 592.8135864138603 MULTI CID FTMS 0 0 0 16539 455753.4375 0.8140883786076336 -2 0.1984634399414062 17 Unmodified _IFLDSKGLEY_ ENSG00000169062|ENST00000375299|UPF3A 33.4449034751529 0.2267874087365337 3 {I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}{I|L}D 6 7 47.357 0.0 0.0 4.001 0.0 0.0 0.0 382.2106112115844 382.2106112115844 21.442708330980835 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.1505149978319906 0.0 {I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}{I|L}D 4.001 - 2927 + 1 1.308 102617.6 1.0 10894 5660 16539 HBL1_DMSO_200M_050219_1,16556 HBL1_DMSO_200M_050219_1,16556,IFLDSKGLEY False True IFLDSKGLEY 80.248723 592.81358641386 5285423.0 16539.0 ENSG00000169062|ENST00000375299|UPF3A 5.495973428090413 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16557 80.255 328.0 381390.0 25 0 38119.0 + -1 NVLVMLRELLR 11 143 686.4105005242677 0 686.4092895388603 PEAK CID FTMS 0 0 0 16539 439082.0625 0.6463524163027013 2 -0.14599609375 18 Oxidation (M) _NVLVM(Oxidation (M))LRELLR_ REV__ENSG00000062822|ENST00000440232|POLD1 8.745405648335112 0.4618489994582195 3 NVVQ 4 -1 26.949 0.0 0.0 1.9659 0.0 0.0 702.4511163730226 225.0889376276 927.5400540006226 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5010912013506126 NVVQ 1.9659 - 551 + 1 1.308 93467.3 1.0 10895 5660 16539 HBL1_DMSO_200M_050219_1,16557 HBL1_DMSO_200M_050219_1,16557,NVLVMLRELLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16558 80.261 336.0 137190.0 25 0 13557.0 + 9334 FIKLHIPEPSV 11 92 640.3727216794473 1278.7308904256945 2 641.3789550662041 MULTI CID FTMS 0 0 0 16539 422303.375 1.0 0 0.0 19 Unmodified _FIKLHIPEPSV_ REV__ENSG00000087470|ENST00000549701|DNM1L;REV__nc|ENSG00000087470|O00429-2|DNM1L;REV__nc|ENSG00000087470|O00429-3|DNM1L;REV__nc|ENSG00000087470|O00429-4|DNM1L;REV__nc|ENSG00000087470|O00429-5|DNM1L;REV__nc|ENSG00000087470|O00429-6|DNM1L;REV__nc|ENSG00000087470|O00429-8|DNM1L;REV__nc|ENSG00000087470|O00429-9|DNM1L 3.2813086475875832 0.8596665074481906 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L} 4 -1 16.198 0.0 0.0 1.2667 0.0 0.0 0.0 790.4283766289607 790.4283766289607 9.208187539523747 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L} 1.2667 - 129 + 1 1.308 39768.0 1.0 10896 5660 16539 HBL1_DMSO_200M_050219_1,16558 HBL1_DMSO_200M_050219_1,16558,FIKLHIPEPSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16559 80.264 169.0 485150.0 25 0 46749.0 + 971 AFPKAVSVF 9 111 483.2768815799292 964.5392102266584 2 483.2778198122978 MULTI CID FTMS 0 0 0 16539 394114.5625 0.8113585745959168 2 -0.14599609375 20 Unmodified _AFPKAVSVF_ ENSG00000141526|ENST00000582743|SLC16A3;ENST00000579572.1_1_17:80193878-80195110:+|nuORF;ENST00000581642.1_1_17:80193878-80194172:+|nuORF;ENST00000584781.5_1_17:80193878-80195055:+|nuORF 20.453626601364224 0.2830276176381075 3 [KP]AVSV 6 3 27.413 0.0 0.0 2.8421 0.0 0.0 0.0 380.16134084668937 380.16134084668937 3.8598178422397567 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.7742275032520141 0.0 + [KP]AVSV 2.8421 + + 370 1 1.308 65641.2 1.0 10897 5660 16539 HBL1_DMSO_200M_050219_1,16559 HBL1_DMSO_200M_050219_1,16559,AFPKAVSVF False True AFPKAVSVF 80.264095 483.277819812298 6963248.5 16539.0 ENST00000584781.5_1_17:80193878-80195055:+|nuORF;;ENSG00000141526|ENST00000582743|SLC16A3;;ENST00000579572.1_1_17:80193878-80195110:+|nuORF;;ENST00000581642.1_1_17:80193878-80194172:+|nuORF 0.8276863694190979 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16561 80.268 7.8 4475300.0 25 0 523440.0 + 26233 NQITQLESL 9 68 523.2800357659532 1044.5455185987064 2 523.2806274294853 MULTI CID FTMS 0 0 0 16560 3896683.5 0.4337775879406047 1 -0.0861434936523437 1 Unmodified _NQITQLESL_ ENSG00000138180|ENST00000371485|CEP55;ENST00000496302.1_1_10:95278654-95279576:+|nuORF 24.020572477871973 0.2255576514309169 3 {I|L}[QT]HS{I|L} 6 4 28.461 0.0 0.0 2.7247 0.0 0.0 347.1727901824939 0.0 347.1727901824939 0.0 16.778259348524358 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {I|L}[QT]HS{I|L} 2.7247 - 157 + 1 1.308 32147.0 1.0 10898 5661 16560 HBL1_DMSO_200M_050219_1,16561 HBL1_DMSO_200M_050219_1,16561,NQITQLESL False True NQITQLESL 80.268183 523.280627429485 66151904.0 16560.0 ENSG00000138180|ENST00000371485|CEP55;;ENST00000496302.1_1_10:95278654-95279576:+|nuORF 2.221922814846039 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16562 80.269 16.0 2697900.0 25 0 357620.0 + 13552 HPFPGPGLAI 10 63 503.2785292671678 1004.5425056011356 2 503.2805053591728 MULTI CID FTMS 0 0 0 16560 2188985.5 0.6331022861029585 1 -0.0861434936523437 2 Unmodified _HPFPGPGLAI_ ENSG00000163655|ENST00000496455|GMPS;nc|ENSG00000163655|P49915-2|GMPS 24.67388899826682 0.4143206957119831 3 [NP]Y{I|L}V{[WT]|[RM]}{I|L} 8 8 + 29.385 0.0 0.0 2.9253 2.9253 76.472 0.0 0.0 0.0 0.9691001300805624 8.721003564066688 0.9691001300805624 7.0140412923769375 0 0.0 0.0 0.0 0.0 [NP]Y{I|L}V{[WT]|[RM]}{I|L};[{I|L}A][MN]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[PG][PG]{I|L}[{I|L}A];{[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{[WT]|[RM]}{I|L} 2.9253;2.227;1.7347;1.1831 -;-;+;- + 86 + 1 1.308 39242.0 1.0 10899 5661 16560 HBL1_DMSO_200M_050219_1,16562 HBL1_DMSO_200M_050219_1,16562,HPFPGPGLAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16563 80.271 2.6 18925000.0 25 0 4762200.0 + 16881 KIFSGVFVKV 10 74 562.346911539554 1122.6792701459078 2 562.3472167849541 MULTI CID FTMS 0 0 0 16560 15434993.0 0.5599765444638992 -1 0.0598526000976562 3 Unmodified _KIFSGVFVKV_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 57.10758569107544 0.0441734977746303 3 K{I|L}{M(Oxidation (M))|F}S[VG]{M(Oxidation (M))|F}VVK 10 2 + 73.297 0.0 0.0 6.5288 6.5288 92.702 0.0 0.0 0.0 60.10985797778668 4.370317661631205 4.370317661631205 24.97547537623447 0 2.579689690656103 1.0969100130080565 0.0 0.3252574989159953 K{I|L}{M(Oxidation (M))|F}S[VG]{M(Oxidation (M))|F}VVK;K{I|L}{M(Oxidation (M))|F}[{I|L}V][YN]VK;K{I|L}[H{I|L}]R{I|L}{[ES]|[DT]|[{I|L}C]}K 6.5288;4.3042;3.9792 -;-;- 497 + 1 1.308 42633.5 1.0 10900 5661 16560 HBL1_DMSO_200M_050219_1,16563 HBL1_DMSO_200M_050219_1,16563,KIFSGVFVKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16564 80.272 15.0 4618000.0 25 0 597100.0 + 16885 KIFSGVFVKV 10 79 375.2340525282494 1122.6803281849482 3 375.2339660525322 MULTI CID FTMS 0 0 0 16560 3697626.5 0.9980110637111436 -2 0.2024459838867187 4 Unmodified _KIFSGVFVKV_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 32.78568957990786 0.2337485590374503 3 V{[MG]|[TS]}VVK 6 6 35.437 0.0 0.0 3.1565 0.0 0.0 491.3095725600422 0.0 491.3095725600422 0.0 24.84097742149596 0.0 0.0 0 0.4247425010840047 0.0 0.7302046884880937 0.3252574989159953 V{[MG]|[TS]}VVK 3.1565 - 148 + 1 1.308 69544.7 1.0 10901 5661 16560 HBL1_DMSO_200M_050219_1,16564 HBL1_DMSO_200M_050219_1,16564,KIFSGVFVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16565 80.273 28.0 1670400.0 25 0 219090.0 + 9273 FHVIILSNYL 10 59 609.8495875822686 1217.684622231337 2 610.3483764529228 MULTI CID FTMS 0 0 0 16560 1354000.125 0.6210000622605248 4 -0.2498855590820312 5 Unmodified _FHVIILSNYL_ REV__ENST00000504653.5_1_3:129168750-129170903:+|nuORF 1.844237919475145 0.7181058121064529 3 M 1 -1 0.088644 0.0 0.0 0.0072797 0.0 0.0 892.5206950846558 191.0929659479125 1083.6136610325684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.0072797 - 5 + 1 1.308 41855.4 1.0 10902 5661 16560 HBL1_DMSO_200M_050219_1,16565 HBL1_DMSO_200M_050219_1,16565,FHVIILSNYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16566 80.274 32.0 1956600.0 25 0 208990.0 + 37927 TLYGPNFNI 9 102 519.7666487358082 1037.5187445384165 2 519.7664672732353 MULTI CID FTMS 0 0 0 16560 1268570.25 0.5149229058796596 1 -0.0861434936523437 6 Unmodified _TLYGPNFNI_ ENST00000402364.1_1_13:23907893-23908031:-|nuORF 25.399314129420983 0.2080152500878129 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}NR{M(Oxidation (M))|F}QV 8 7 + 48.298 0.0 0.0 4.6551 4.6551 80.935 0.0 0.0 0.0 14.60364147389832 27.14375194441269 14.60364147389832 7.043650362227254 0 0.8371804965004639 0.8538719643217619 0.7742275032520141 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}NR{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}SK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}N[VG]{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}GGR{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}[RN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QV;{[DA]|[EG]}P{M(Oxidation (M))|F}SK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}GG[VG]{M(Oxidation (M))|F}QV;{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}DK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[KS]QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}[KS]QV 4.6551;3.9762;3.7624;3.7624;3.3519;3.2154;2.8749;2.6688;2.5096;2.5096 -;-;-;-;-;-;-;-;-;- 324 1 1.308 54171.4 1.0 10903 5661 16560 HBL1_DMSO_200M_050219_1,16566 HBL1_DMSO_200M_050219_1,16566,TLYGPNFNI False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16567 80.276 84.0 563760.0 25 0 119070.0 + 31715 RRRKSPRTH 9 63 597.3582759814785 1192.701999029757 2 597.3589355349541 MULTI CID FTMS 0 0 0 16560 970792.875 0.7406211521061473 1 -0.0861434936523437 7 Unmodified _RRRKSPRTH_ REV__ENST00000441222.7_1_4:53494215-53494263:-|nuORF 3.2813086475875832 0.8001353427076754 3 {I|L}{I|L} 2 -1 10.969 0.0 0.0 0.91968 0.0 0.0 225.1860211018257 738.3250216119749 963.5110427138006 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 0.91968 - 7 + 1 1.308 40797.2 1.0 10904 5661 16560 HBL1_DMSO_200M_050219_1,16567 HBL1_DMSO_200M_050219_1,16567,RRRKSPRTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16568 80.28 222.0 1098900.0 25 0 41643.0 + -1 TGYMPLTV 8 158 881.9051346241091 1761.795716315018 2 881.9045898318291 MULTI CID FTMS 0 0 0 16560 962983.9375 0.1225948007479807 -5 0.4290237426757812 8 nc|ENSG00000108582|O75976-2|CPD;ENSG00000108582|ENST00000225719|CPD 3 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YQ[{I|L}V] 16 -1 + 132.02 0.0 0.0 7.4938 7.4938 63.418 0.0 0.0 0.0 8.728473723926456 7.659167939666304 7.659167939666304 0.0 0 1.2059771852360797 1.5228787452803376 2.479339555460717 2.543157681736544 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQW{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QAQDA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QAQDA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]AGAQDA{M(Oxidation (M))|F}YK[{I|L}V];[YQ]V[CS]AGAQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGA[AG]DA{M(Oxidation (M))|F}YK[{I|L}V] 7.4938;7.4938;7.3128;7.3128;7.1129;7.1129;7.1129;6.9983;6.9983;6.9821 -;-;-;-;-;-;-;-;-;- 137574 1 1.308 166219.5 1.0 10905 5661 16560 HBL1_DMSO_200M_050219_1,16568 HBL1_DMSO_200M_050219_1,16568, False False TGYMPLTV 80.280185 881.904589831829 1029444.875 16560.0 nc|ENSG00000108582|O75976-2|CPD;;ENSG00000108582|ENST00000225719|CPD 0.8723085522651672 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16569 80.283 119.0 1311600.0 25 0 162840.0 + 35781 SVIPVINKI 9 131 491.8185775800388 981.6226022268776 2 491.8186218142509 MULTI CID FTMS 0 0 0 16560 875034.4375 0.3125023380951161 3 -0.2035140991210937 9 Unmodified _SVIPVINKI_ ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF 61.357469665136826 0.0253304979873734 3 [VS]{I|L}PV{I|L}QKV 9 2 + 77.684 0.0 0.0 7.9138 7.9138 82.872 0.0 0.0 0.0 22.37643016799588 1.1197375944393144 1.1197375944393144 1.1197375944393144 0 0.9247425010840048 1.5228787452803376 0.0 1.2658715643802767 [VS]{I|L}PV{I|L}QKV;[VS]{I|L}PV{I|L}QVK;[VS]{I|L}VP{I|L}QKV;[VS]{I|L}VP{I|L}QVK;[VS]{I|L}PV{I|L}NK{I|L};[VS]{I|L}VP{I|L}NK{I|L};[VS]{I|L}PV{I|L}[AG]KV;[VS]{I|L}PV{I|L}[AG]VK;[VS]{I|L}VP{I|L}[AG]KV;[VS]{I|L}PV{I|L}N{I|L}K 7.9138;7.7997;7.6878;7.5737;7.2201;6.9941;6.9758;6.8617;6.7498;6.6452 -;-;-;-;+;-;-;-;-;- + 914 + 1 1.308 119665.2 1.0 10906 5661 16560 HBL1_DMSO_200M_050219_1,16569 HBL1_DMSO_200M_050219_1,16569,SVIPVINKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16570 80.284 32.0 1620000.0 25 0 208280.0 + 45080 YPYLGPSTL 9 79 505.7633182339084 1009.5120835346167 2 505.7626220583916 MULTI CID FTMS 0 0 0 16560 823999.0 0.1079143837148091 -5 0.4290237426757812 10 Unmodified _YPYLGPSTL_ ENSG00000136631|ENST00000644510|VPS45;nc|ENSG00000136631|Q9NRW7-2|VPS45 34.18733598223924 0.1073653526364521 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GY 5 5 34.437 0.0 0.0 3.4112 0.0 0.0 0.0 413.2040642064375 413.2040642064375 12.27986387747039 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GY 3.4112 - 128 1 1.308 44228.3 1.0 10907 5661 16560 HBL1_DMSO_200M_050219_1,16570 HBL1_DMSO_200M_050219_1,16570,YPYLGPSTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16571 80.286 85.0 690250.0 25 0 87008.0 + + 9515 FLPETRIMTSV 11 78 647.3454176077583 1292.6762822823166 2 647.3442260622978 MULTI CID FTMS 0 0 0 16560 424941.25 0.5476422834427749 -1 0.0598526000976562 11 Unmodified _FLEFSVRGLPE_ nc|ENSG00000122882|O95905-3|ECD;ENSG00000122882|ENST00000372979|ECD 19.361941925380144 0.6323962752489956 3 ST{[QN]|[E{I|L}]|[KN]}AGP{[QN]|[E{I|L}]|[KN]} 9 -1 25.613 0.0 0.0 1.9814 0.0 0.0 377.2256730067291 0.0 377.2256730067291 0.0 4.186296826174999 0.0 0.0 0 1.0 0.0 1.079689690656103 0.0 ST{[QN]|[E{I|L}]|[KN]}AGP{[QN]|[E{I|L}]|[KN]} 1.9814 - 187 + 1 1.308 50350.6 1.0 10908 5661 16560 HBL1_DMSO_200M_050219_1,16571 HBL1_DMSO_200M_050219_1,16571,FLEFSVRGLPE False False FLPETRIMTSV 80.285756 647.344226062298 4098715.5 16560.0 nc|ENSG00000122882|O95905-3|ECD;;ENSG00000122882|ENST00000372979|ECD 5.025367418924968 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16572 80.293 412.0 758290.0 25 0 123140.0 9070 FFCRGDLS 8 193 472.7173814060848 943.4202098789696 2 472.7177612185478 MULTI CID FTMS 0 0 0 16560 328533.65625 0.2686743261672719 -2 0.2024459838867187 12 Unmodified _FFCRGDLS_ L1MC3_dup7320|chrX:70161794-70162664:+|1.112392509996284|0.2551508396873335|2.12|48.0|62|3|anti-sense 14.581692164780916 0.6954967302934248 3 {[TV]|[{I|L}S]}E 3 7 14.169 0.0 0.0 1.5019 0.0 0.0 0.0 611.2379338382071 611.2379338382071 2.5750172666864373 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.4134117563873403 0.0 {[TV]|[{I|L}S]}E 1.5019 - 290 1 1.308 233388.8 1.0 10909 5661 16560 HBL1_DMSO_200M_050219_1,16572 HBL1_DMSO_200M_050219_1,16572,FFCRGDLS False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 16573 80.301 436.0 748400.0 25 0 90434.0 + 12676 GVLPNIQAV 9 163 455.7712203434208 909.5278877536416 2 455.7718994021416 MULTI CID FTMS 0 0 0 16560 319642.65625 0.0048506772931794 -11 0.9450149536132812 13 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 50.855029805455786 0.0384952370514206 3 [NP]{I|L}QA{I|L} 6 4 43.043 0.0 0.0 4.7324 0.0 0.0 0.0 270.1452332949104 270.1452332949104 7.257476770838075 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 1.0673851849885578 [NP]{I|L}QA{I|L} 4.7324 - 4162 1 1.308 249916.7 1.0 10910 5661 16560 HBL1_DMSO_200M_050219_1,16573 HBL1_DMSO_200M_050219_1,16573,GVLPNIQAV True True GVLPNIQAV 80.300849 455.771899402142 4176283776.0 16560.0 ENSG00000196747|ENST00000358739|H2AC13;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000276903|ENST00000613174|H2AC16;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000274997|ENST00000377459|H2AC12;;ENSG00000184270|ENST00000331128|H2AC21;;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;;ENSG00000180573|ENST00000377791|H2AC6;;nc|ENSG00000246705|Q9BTM1-2|H2AJ;;ENSG00000246705|ENST00000544848|H2AJ 5.819111347198486 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16574 80.308 412.0 720280.0 25 0 63211.0 + 32627 SAYGPGLVSI 10 202 482.2615360418797 962.5085191505592 2 482.2624084353447 MULTI CID FTMS 0 0 0 16560 316337.4375 0.4111490845038502 -1 0.0598526000976562 14 Unmodified _SAYGPGLVSI_ ENSG00000079819|ENST00000337057|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2 43.85829265575387 0.1168243637355526 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}VSGP{I|L}G 9 8 28.902 0.0 0.0 3.0027 0.0 0.0 0.0 68.0514162652953 68.0514162652953 4.838651824456719 0.0 0.0 0.0 0 0.0 0.5086383061657274 0.6549471895720985 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}VSGP{I|L}G 3.0027 - 2353 + 1 1.308 223062.9 1.0 10911 5661 16560 HBL1_DMSO_200M_050219_1,16574 HBL1_DMSO_200M_050219_1,16574,SAYGPGLVSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16575 80.314 341.0 509190.0 25 0 31574.0 -1 0 146 620.6407649090406 1858.9004653273216 3 620.9763671755791 MULTI CID FTMS 0 0 0 16560 293955.875 0.1176422181248037 -11 0.9450149536132812 15 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[KC]HS{I|L}D{M(Oxidation (M))|F}HP{M(Oxidation (M))|F} 13 -1 55.857 0.0 0.0 3.0048 0.0 0.0 0.0 287.10060072527693 287.10060072527693 25.58193838835649 0.0 0.0 0.0 0 0.4247425010840047 1.0457574905606752 0.4247425010840047 0.3252574989159953 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[KC]HS{I|L}D{M(Oxidation (M))|F}HP{M(Oxidation (M))|F} 3.0048 - 5528 1 1.308 131214.8 1.0 10912 5661 16560 HBL1_DMSO_200M_050219_1,16575 HBL1_DMSO_200M_050219_1,16575, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16576 80.322 418.0 563180.0 25 0 62441.0 + -1 LAEMEMSL 8 200 478.2091679885692 954.4037830439383 2 478.7412902712822 MULTI CID FTMS 0 0 0 16560 62639.34375 0.0388926673142636 -25 2.1653289794921875 16 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 10.183394434864962 0.7604730176254005 3 [{I|L}T]RRPAM 7 -1 20.014 0.0 0.0 2.097 0.0 0.0 0.0 125.91440472045726 125.91440472045726 1.839500701097858 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.1595680409956017 0.0 [{I|L}T]RRPAM 2.097 - 1428 1 1.308 178684.1 1.0 10913 5661 16560 HBL1_DMSO_200M_050219_1,16576 HBL1_DMSO_200M_050219_1,16576,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16577 80.325 134.0 1491700.0 25 0 87374.0 + 16905 KIIGIMEEV 9 181 516.2933887735013 1030.5722246138023 2 516.2942993044853 MULTI CID FTMS 0 0 0 16560 287948.625 0.0622087898555656 -5 0.4290237426757812 17 Unmodified _KIIGIMEEV_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 78.7280429016045 0.0178249292250809 3 [K{I|L}]{I|L}G{I|L}MEEV 9 0 + 59.084 0.0 0.0 5.7331 5.7331 83.368 0.0 0.0 0.0 5.898255349109505 14.09256854528806 5.898255349109505 5.898255349109505 0 0.9143943297944483 0.6777807052660807 0.5994850021680094 0.2887254899964357 + + [K{I|L}]{I|L}G{I|L}MEEV;{I|L}{I|L}KG{I|L}MEEV;{I|L}{I|L}GK{I|L}MEEV;[K{I|L}]{I|L}GM{I|L}EEV;{I|L}{I|L}G{I|L}KMEEV;{[VA]|[{I|L}G]}{I|L}K{I|L}MEEV;{NN|[MP]|[D{I|L}]|[EV]}EMA{I|L}K{I|L}V;{I|L}{I|L}KGM{I|L}EEV;EEMVA{I|L}K{I|L}V;{[VA]|[{I|L}G]}{I|L}{I|L}KMEEV 5.7331;5.1608;4.5885;4.4237;4.1256;4.117;4.1087;3.8513;3.7547;3.6541 +;-;-;-;-;-;-;-;-;- + 2912 1 1.308 154552.2 1.0 10914 5661 16560 HBL1_DMSO_200M_050219_1,16577 HBL1_DMSO_200M_050219_1,16577,KIIGIMEEV True True KIIGIMEEV 80.324549 516.294299304485 75339688.0 16560.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-2|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 5.014257589975993 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16578 80.335 499.0 832370.0 25 0 212520.0 8447 ESQAQEPGV 9 196 315.48086849029454 943.4207760710837 3 315.4805480837822 MULTI CID FTMS 0 0 0 16560 301592.8125 0.3473901205700513 -3 0.2583160400390625 18 Unmodified _ESQAQEPGV_ ENSG00000053108|ENST00000265342|FSTL4;ENST00000509525.5_1_5:132556617-132561512:-|nuORF;nc|ENSG00000053108|Q6MZW2-2|FSTL4;nc|ENSG00000053108|Q6MZW2-3|FSTL4 2.9952420565917617 0.8101217823238775 3 G 1 8 9.0344 0.0 0.0 0.95762 0.0 0.0 868.3879448106329 0.0 868.3879448106329 0.0 -2.559416804894372 -2.559416804894372 0.0 0 0.0 0.0 0.0 0.0 + G 0.95762 + + 55 + 1 1.308 329422.0 1.0 10915 5661 16560 HBL1_DMSO_200M_050219_1,16578 HBL1_DMSO_200M_050219_1,16578,ESQAQEPGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16579 80.342 405.0 395410.0 25 0 96352.0 + + -1 MVAPDKDYFL 10 189 599.7951606372677 1197.575768341335 2 600.2985717654228 MULTI CID FTMS 0 0 0 16560 198300.234375 0.7989714589263796 1 -0.0861434936523437 19 Oxidation (M) _VEM(Oxidation (M))GFSALLCL_ ENSG00000125971|ENST00000357156|DYNLRB1;ENST00000480759.1_1_20:33117938-33128425:+|nuORF 24.020572477871973 0.5281922720044371 3 {NN|[MP]|[D{I|L}]|[EV]}CC{I|L}AA{M(Oxidation (M))|F} 8 -1 17.457 0.0 0.0 1.4577 0.0 0.0 0.0 358.18401964432286 358.18401964432286 -0.5866814795592035 0.0 -0.5866814795592035 0.0 0 0.0 1.3010299956639813 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}CC{I|L}AA{M(Oxidation (M))|F} 1.4577 - 1825 1 1.308 114841.6 1.0 10916 5661 16560 HBL1_DMSO_200M_050219_1,16579 HBL1_DMSO_200M_050219_1,16579,VEMGFSALLCL False False MVAPDKDYFL 80.341774 600.298571765423 4198641.5 16560.0 ENSG00000125971|ENST00000357156|DYNLRB1;;ENST00000480759.1_1_20:33117938-33128425:+|nuORF 1.8027733365694685 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16580 80.35 480.0 502990.0 25 0 49499.0 + 37160 TIAQLVHAV 9 212 476.2841111279459 950.5536693226918 2 476.2846252322197 MULTI CID FTMS 0 0 0 16560 204663.21875 0.6602100543674397 1 -0.0861434936523437 20 Unmodified _TIAQLVHAV_ ENSG00000160208|ENST00000340648|RRP1B;nc|ENSG00000160208|Q14684-2|RRP1B 38.15118350030904 0.0856056900103839 3 [{I|L}T]AQ{I|L}VHG{I|L} 9 2 + 44.029 0.0 0.0 4.6319 4.6319 76.104 0.0 0.0 0.0 20.93982745171206 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.4247425010840047 2.0 0.0 0.3494850021680094 [{I|L}T]AQ{I|L}VHG{I|L};[{I|L}T]AQ{I|L}VHAV;[{I|L}T]A[AG]{I|L}VHG{I|L};[{I|L}T]A[AG]{I|L}VHAV;[{I|L}T]AQ{I|L}[H{I|L}]GV;[{I|L}A]Q[KP]QA[VP];[{I|L}P]K[QA]QA[VP];{[VA]|[{I|L}G]}AA[KP]QA[VP];{[VA]|[{I|L}G]}PV[W{I|L}]A[VP];[{I|L}P]GV[W{I|L}]A[VP] 4.6319;4.3152;3.2955;2.9788;2.5198;2.0611;1.7739;1.6212;1.6081;1.4544 -;+;-;-;-;-;-;-;-;- + 620 + 1 1.308 182715.1 1.0 10917 5661 16560 HBL1_DMSO_200M_050219_1,16580 HBL1_DMSO_200M_050219_1,16580,TIAQLVHAV True True TIAQLVHAV 80.350256 476.28462523222 3765167.0 16560.0 nc|ENSG00000160208|Q14684-2|RRP1B;;ENSG00000160208|ENST00000340648|RRP1B 4.850784142812093 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16582 80.354 0.57 70313000.0 25 0 7865000.0 23708 LTTRPSESKT 10 62 560.3015923871525 1118.5886318411049 2 560.3026611208916 MULTI CID FTMS 0 0 0 16581 100152976.0 0.4296259096044872 5 -0.313385009765625 1 Unmodified _LTTRPSESKT_ ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1 13.042465956692816 0.6287021003332052 3 [{I|L}T]C(Carbamidomethyl (C))PV{I|L}T 7 6 41.15 0.0 0.0 3.6787 0.0 0.0 0.0 331.14774984331115 331.14774984331115 27.654944660392005 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.8252574989159953 0.0 [{I|L}T]C(Carbamidomethyl (C))PV{I|L}T 3.6787 - 103 1 1.258 36832.3 1.0 10918 5662 16581 HBL1_DMSO_200M_050219_1,16582 HBL1_DMSO_200M_050219_1,16582,LTTRPSESKT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16583 80.355 1.5 42906000.0 25 0 6839300.0 + 4630 DAYVLPKL 8 72 459.7681889261383 917.5218249190766 2 459.7685119509697 MULTI CID FTMS 0 0 0 16581 42858440.0 0.941706467627585 2 -0.11737060546875 2 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 32.30548876998284 0.3644845974844379 3 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 + 61.86 0.0 0.0 6.742 6.742 91.069 0.0 0.0 0.0 50.688812894078126 9.463950151760656 9.463950151760656 10.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L};{[DA]|[EG]}YV{I|L}{I|L}[KP] 6.742;5.6522 +;- + 59 + 1 1.258 54087.4 1.0 10919 5662 16581 HBL1_DMSO_200M_050219_1,16583 HBL1_DMSO_200M_050219_1,16583,DAYVLPKL False True DAYVLPKL 80.355503 459.76851195097 3150821632.0 16581.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 6.830191294352214 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16584 80.357 1.8 21266000.0 25 0 1965500.0 19904 LHSTLFLWE 9 73 573.300677006193 1144.586801079186 2 573.3010742068291 MULTI CID FTMS 0 0 0 16581 34304984.0 1.0 0 0.0 3 Unmodified _LHSTLFLWE_ ENST00000371614.1_1_1:52498303-52498345:-|nuORF 16.942295170755138 0.3780752226737986 3 [H{I|L}]S{M(Oxidation (M))|F}{I|L}T 6 4 36.229 0.0 0.0 3.1653 0.0 0.0 0.0 443.1874840227985 443.1874840227985 2.1348349492058816 0.0 0.0 0.0 0 0.0 0.958607314841775 0.4247425010840047 0.0 [H{I|L}]S{M(Oxidation (M))|F}{I|L}T 3.1653 - 215 1 1.258 34764.7 1.0 10920 5662 16581 HBL1_DMSO_200M_050219_1,16584 HBL1_DMSO_200M_050219_1,16584,LHSTLFLWE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16585 80.358 6.3 7056200.0 25 0 1002300.0 + -1 AIMPSALAL 9 65 451.7527689299804 901.4909849267608 2 451.7528259158134 MULTI CID FTMS 0 0 0 16581 9006325.0 0.1149564539324869 -24 2.0605926513671875 4 Oxidation (M) _AIM(Oxidation (M))PSALAL_ REV__ENSG00000196531|ENST00000454682|NACA;REV__nc|ENSG00000196531|E9PAV3-2|NACA 38.15118350030904 0.0856056900103839 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 63.835 0.0 0.0 7.081 7.081 93.145 0.0 0.0 0.0 14.795737170962155 8.384767769392738 8.384767769392738 14.795737170962155 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPAS{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};{[TV]|[{I|L}S]}[RD]D{I|L}A{I|L} 7.081;5.4398;5.0041;4.1662;4.0871;2.0582 -;-;-;-;-;- 104 1 1.258 42440.3 1.0 10921 5662 16581 HBL1_DMSO_200M_050219_1,16585 HBL1_DMSO_200M_050219_1,16585,AIMPSALAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16586 80.359 9.2 5393300.0 25 0 346040.0 + 44930 YPPWPGKIV 9 88 528.7980392882323 1055.5815256432645 2 528.7979614138603 MULTI CID FTMS 0 0 0 16581 4496897.5 0.1800047978356341 -24 2.0605926513671875 5 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 50.855029805455786 0.0384952370514206 3 YPPW 4 5 59.725 0.0 0.0 5.658 0.0 0.0 0.0 509.3108581934071 509.3108581934071 42.1002345915111 0.0 0.0 0.0 0 1.079689690656103 2.0 0.0 0.0 + YPPW 5.658 + + 98 + 1 1.258 45984.0 1.0 10922 5662 16581 HBL1_DMSO_200M_050219_1,16586 HBL1_DMSO_200M_050219_1,16586,YPPWPGKIV True True YPPWPGKIV 80.359039 528.7982 2419666368.0 16581.0 nc|ENSG00000140632|Q49A26-5|GLYR1;;nc|ENSG00000140632|Q49A26-3|GLYR1;;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;;ENSG00000140632|ENST00000321919|GLYR1;;nc|ENSG00000140632|Q49A26-2|GLYR1 6.971721172332764 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16587 80.36 12.0 3283100.0 25 0 250700.0 + 10523 FVDPAQITM 9 57 511.2545661416019 1020.4945793500038 2 511.2550842165947 MULTI CID FTMS 0 0 0 16581 4414500.0 0.7717440121003587 2 -0.11737060546875 6 Unmodified _FVDPAQITM_ ENSG00000167325|ENST00000300738|RRM1 25.399314129420983 0.2080152500878129 3 [{I|L}T]{M(Oxidation (M))|F}PAQ 6 6 26.163 0.0 0.0 2.5638 0.0 0.0 0.0 360.1577542579109 360.1577542579109 2.975694635544741 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [{I|L}T]{M(Oxidation (M))|F}PAQ 2.5638 - 112 1 1.258 34931.6 1.0 10923 5662 16581 HBL1_DMSO_200M_050219_1,16587 HBL1_DMSO_200M_050219_1,16587,FVDPAQITM False True FVDPAQITM 80.360218 511.255084216595 273921568.0 16581.0 ENSG00000167325|ENST00000300738|RRM1 6.827491124471028 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16588 80.361 18.0 2965800.0 25 0 370080.0 + 34900 SQIEADFRL 9 76 539.7800980862982 1077.5456432393962 2 539.7803222537041 MULTI CID FTMS 0 0 0 16581 3008506.0 0.1171326878466231 5 -0.313385009765625 7 Unmodified _SQIEADFRL_ ENSG00000198900|ENST00000361337|TOP1 34.93206674587334 0.1032771302489716 3 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}] 9 2 + 61.818 0.0 0.0 5.7369 5.7369 91.315 0.0 0.0 0.0 57.21394354078235 4.762036441594191 4.762036441594191 61.81803731054423 0 1.0 1.0457574905606752 0.4247425010840047 0.0 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}] 5.7369 - 81 + 1 1.258 46525.0 1.0 10924 5662 16581 HBL1_DMSO_200M_050219_1,16588 HBL1_DMSO_200M_050219_1,16588,SQIEADFRL True True SQIEADFRL 80.361397 539.780322253704 916507840.0 16581.0 ENSG00000198900|ENST00000361337|TOP1 5.750056107838948 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16589 80.363 49.0 530860.0 25 0 65542.0 -1 0 48 785.6788485368983 2354.0147162108947 3 786.0142700076103 MULTI CID FTMS 0 0 0 16581 2077654.0 0.6344198156990548 2 -0.11737060546875 8 3 YY[W{I|L}]{I|L} 5 -1 21.707 0.0 0.0 0.92213 0.0 0.0 0.0 1612.609721879078 1612.609721879078 7.727562184969372 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 YY[W{I|L}]{I|L} 0.92213 - 33 1 1.258 36459.7 1.0 10925 5662 16581 HBL1_DMSO_200M_050219_1,16589 HBL1_DMSO_200M_050219_1,16589, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16590 80.364 38.0 1609400.0 25 0 165420.0 + 26654 NYIDRFLSSM 10 68 631.2973557852757 1260.5801586373514 2 631.2977783083916 MULTI CID FTMS 0 0 0 16581 1983504.625 0.9662711974945208 2 -0.11737060546875 9 Oxidation (M) _NYIDRFLSSM(Oxidation (M))_ ENSG00000145386|ENST00000274026|CCNA2 62.86856922530385 0.0290614069976636 3 [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F} 10 0 + 75.526 0.0 0.0 5.9913 5.9913 91.19 0.0 0.0 0.0 24.88438100576431 58.535853251533965 24.88438100576431 26.99092531119419 0 2.242992819099939 2.0 0.0 0.3252574989159953 + + [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F};[YN]{I|L}DR{M(Oxidation (M))|F}{[WT]|[RM]}{M(Oxidation (M))|F};[YN]{I|L}[K{I|L}][WY]D{M(Oxidation (M))|F};[HD]S{I|L}[EC][{I|L}T]{I|L}[KC];[HD]D{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[{I|L}T]{I|L}[KC] 5.9913;3.8502;3.538;1.5209;0.62743 +;-;-;-;- + 190 1 1.258 54550.4 1.0 10926 5662 16581 HBL1_DMSO_200M_050219_1,16590 HBL1_DMSO_200M_050219_1,16590,NYIDRFLSSM True False NYIDRFLSSM 80.363905 631.297778308392 37655768.0 16581.0 ENSG00000145386|ENST00000274026|CCNA2 9.760220209757486 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16591 80.365 26.0 1796100.0 25 0 122560.0 + 43134 VYPEYVIQY 9 80 587.2950573805119 1172.5755618278238 2 587.2962524294853 MULTI CID FTMS 0 0 0 16581 1958160.5 0.0703572258817197 7 -0.4058456420898437 10 Unmodified _VYPEYVIQY_ ENSG00000059378|ENST00000263549|PARP12 12.531546534597751 0.4974689918368763 3 [YV][EP]{I|L}V[NP]P 9 4 30.876 0.0 0.0 2.6332 0.0 0.0 0.0 161.02496063257834 161.02496063257834 16.271818570135327 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 [YV][EP]{I|L}V[NP]P 2.6332 - 357 1 1.258 39320.9 1.0 10927 5662 16581 HBL1_DMSO_200M_050219_1,16591 HBL1_DMSO_200M_050219_1,16591,VYPEYVIQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16592 80.366 33.0 1580200.0 25 0 142710.0 + 30695 RFQDQVLDL 9 81 567.3006225919917 1132.5866922507832 2 567.3008911013603 MULTI CID FTMS 0 0 0 16581 1517556.5 0.6424189867852879 -2 0.14599609375 11 Unmodified _RFQDQVLDL_ ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI 34.93206674587334 0.1032771302489716 3 [R{M(Oxidation (M))|F}]QDQV{I|L}D{I|L} 9 0 + 56.119 0.0 0.0 4.955 4.955 73.834 0.0 0.0 0.0 0.9813624419633272 0.9813624419633272 0.9813624419633272 0.9813624419633272 0 0.5 0.0 0.0 0.3494850021680094 + + [R{M(Oxidation (M))|F}]QDQV{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}VQD[KG]D{I|L};[YN]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}V{I|L}D{I|L};{[TV]|[{I|L}S]}[KC]DQV{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}VQ{[WN]|[YH]}D{I|L};[R{M(Oxidation (M))|F}][AG]DQV{I|L}D{I|L};[R{M(Oxidation (M))|F}]QD[AG]V{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}V[AG]D[KG]D{I|L};{[TV]|[{I|L}S]}[KC]D[AG]V{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}V[AG]{[WN]|[YH]}D{I|L} 4.955;4.8683;4.7995;4.5687;4.2916;4.142;4.142;4.0592;3.7595;3.4786 +;-;-;-;-;-;-;-;-;- + 295 1 1.258 45839.6 1.0 10928 5662 16581 HBL1_DMSO_200M_050219_1,16592 HBL1_DMSO_200M_050219_1,16592,RFQDQVLDL True True RFQDQVLDL 80.366263 567.30089110136 48436296.0 16581.0 nc|ENSG00000140525|Q9NVI1-2|FANCI;;nc|ENSG00000140525|Q9NVI1-1|FANCI;;ENSG00000140525|ENST00000310775|FANCI 5.807394822438558 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16593 80.367 36.0 729100.0 25 0 90314.0 9348 FILMTWTVLK 10 48 626.3613996006916 1250.708246268183 2 626.3624755740166 MULTI CID FTMS 0 0 0 16581 1409644.0 0.6682430440137324 -1 0.0861434936523437 12 Unmodified _FILMTWTVLK_ L1MC3_dup7320|chrX:70161794-70162664:+|1.112392509996284|0.2551508396873335|2.12|48.0|58|3|anti-sense 3.2813086475875832 0.7114585191678878 3 {M(Oxidation (M))|F} 1 9 2.2185 0.0 0.0 0.17738 0.0 0.0 625.4302444144706 475.2201021783813 1100.650346592852 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.17738 + + 7 + 1 1.258 25298.7 1.0 10929 5662 16581 HBL1_DMSO_200M_050219_1,16593 HBL1_DMSO_200M_050219_1,16593,FILMTWTVLK False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 16594 80.369 60.0 1882200.0 25 0 136010.0 33950 SLHLLVNKI 9 135 518.8291771906481 1035.6438014480962 2 518.8290283083916 MULTI CID FTMS 0 0 0 16581 988244.0 0.9852423360678771 -2 0.14599609375 13 Unmodified _SLHLLVNKI_ ENST00000311351.8_1_8:38020868-38020931:-|nuORF 28.486842064014134 0.1687311288560894 3 TV{I|L}[WR]T{I|L} 7 7 34.046 0.0 0.0 3.2874 0.0 0.0 148.1178345483566 0.0 148.1178345483566 0.0 10.814243664528576 0.0 0.0 0 0.5 0.0 0.5356668758921829 0.0 TV{I|L}[WR]T{I|L} 3.2874 - 483 + 1 1.258 89990.0 1.0 10930 5662 16581 HBL1_DMSO_200M_050219_1,16594 HBL1_DMSO_200M_050219_1,16594,SLHLLVNKI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16595 80.371 71.0 1150600.0 25 0 92327.0 -1 MLQHWELGQ 9 108 579.274597923059 1156.534642912918 2 579.2754394412041 MULTI CID FTMS 0 0 0 16581 1007732.0 0.4869547023165915 6 -0.3716354370117187 14 Oxidation (M) _M(Oxidation (M))LQHWELGQ_ ENSG00000134575|ENST00000672073|ACP2;ENST00000444355.5_1_11:47267202-47270343:-|nuORF;ENST00000529788.2_1_11:47269122-47270343:-|nuORF;nc|ENSG00000134575|P11117-2|ACP2 13.042465956692816 0.4836390050082244 3 {I|L}{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 1.4227 0.0 0.0 0.0 893.37589341249 893.37589341249 0.9864027906280964 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.4227 - 139 + 1 1.258 67150.2 1.0 10931 5662 16581 HBL1_DMSO_200M_050219_1,16595 HBL1_DMSO_200M_050219_1,16595,MLQHWELGQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16596 80.372 62.0 819240.0 25 0 86306.0 + 24876 MPMQDIKMI 9 83 553.7739640129141 1105.533375092628 2 553.7744628787041 MULTI CID FTMS 0 0 0 16581 900087.375 0.0996714235219 5 -0.313385009765625 15 Unmodified _MPMQDIKMI_ ENSG00000185686|ENST00000405655|PRAME 67.83816525789305 0.0219346420158844 3 MPMQD{I|L}KM{I|L} 9 0 + 85.844 0.0 0.0 7.765 7.765 92.718 0.0 0.0 0.0 55.9568378181978 12.587418566968154 12.587418566968154 9.208187539523747 0 1.8807196863200843 2.0 0.0 0.3494850021680094 + + MPMQD{I|L}KM{I|L};MPM[AG]D{I|L}KM{I|L};[YV][VG][C(Carbamidomethyl (C))H]KM{I|L};{NN|[MP]|[D{I|L}]|[EV]}QD{I|L}[Q{I|L}][YV];{NN|[MP]|[D{I|L}]|[EV]}[AG]D{I|L}[Q{I|L}][YV] 7.765;6.932;1.8409;1.7769;0.94395 +;-;-;-;- + 379 + 1 1.258 47614.9 1.0 10932 5662 16581 HBL1_DMSO_200M_050219_1,16596 HBL1_DMSO_200M_050219_1,16596,MPMQDIKMI True True MPMQDIKMI 80.372176 553.774462878704 185968476.0 16581.0 ENSG00000185686|ENST00000405655|PRAME 7.982702255249023 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16597 80.377 233.0 522410.0 25 0 92606.0 13245 HIFLQLEILSP 11 144 655.3817727593439 1308.7489925854877 2 655.3809692263603 MULTI CID FTMS 0 0 0 16581 729955.5625 0.2264729354571789 11 -0.5411758422851562 16 Unmodified _HIFLQLEILSP_ ENST00000452780.1_2_2:120776709-120799636:+|nuORF 5.731851221503515 0.8481046878870278 3 {M(Oxidation (M))|F}GSV 4 9 23.686 0.0 0.0 1.8098 0.0 0.0 654.4009223724003 261.16111169986567 915.562034072266 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {M(Oxidation (M))|F}GSV 1.8098 - 400 + 1 1.258 109358.5 1.0 10933 5662 16581 HBL1_DMSO_200M_050219_1,16597 HBL1_DMSO_200M_050219_1,16597,HIFLQLEILSP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16598 80.382 316.0 474830.0 25 0 40403.0 + 41805 VPVSGMQPPMT 11 154 381.8563299297026 1142.547160389308 3 381.8562805056572 MULTI CID FTMS 0 0 0 16581 633238.0625 0.4467542025097547 5 -0.313385009765625 17 Unmodified _VPVSGMQPPMT_ REV__nc|ENSG00000073921|Q13492-2|PICALM 17.11289562659939 0.6791789249425932 3 [VP]Q{I|L}G 5 -1 19.641 0.0 0.0 1.7191 0.0 0.0 0.0 645.2391519266704 645.2391519266704 5.91251590079672 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [VP]Q{I|L}G 1.7191 - 1140 1 1.258 124925.8 1.0 10934 5662 16581 HBL1_DMSO_200M_050219_1,16598 HBL1_DMSO_200M_050219_1,16598,VPVSGMQPPMT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16599 80.388 320.0 708150.0 25 0 70862.0 + 4521 DAYLQSLAKKI 11 174 417.2431588030073 1248.7076470092218 3 417.2438232302666 MULTI CID FTMS 0 0 0 16581 612792.9375 0.8885314611802213 -2 0.14599609375 18 Unmodified _DAYLQSLAKKI_ ENSG00000148296|ENST00000372022|SURF6 59.05245873256422 0.0729907235015292 3 {[DA]|[EG]}Y{I|L}{I|L}QSAKK{I|L} 11 2 + 86.27 0.0 0.0 6.9087 6.9087 78.951 0.0 0.0 0.0 19.357285695614365 3.61727836017593 3.61727836017593 0.3123468415207497 0 0.7134679910804405 1.6989700043360187 1.610924374808178 1.086696871556164 {[DA]|[EG]}Y{I|L}{I|L}QSAKK{I|L};{[DA]|[EG]}Y{I|L}Q{I|L}SAKK{I|L};{[DA]|[EG]}Y{I|L}QS{I|L}AKK{I|L};{[DA]|[EG]}Y{I|L}{I|L}QSAK{I|L}K;{[DA]|[EG]}Y{I|L}Q{I|L}SAK{I|L}K;{[DA]|[EG]}Y{I|L}QS{I|L}AK{I|L}K;{[DA]|[EG]}Y{I|L}{I|L}[AG]SAKK{I|L};{[DA]|[EG]}Y{I|L}[AG]{I|L}SAKK{I|L};{[DA]|[EG]}{I|L}Y{I|L}QSAKK{I|L};{[DA]|[EG]}Y{I|L}[AG]S{I|L}AKK{I|L} 6.9087;6.8837;6.8556;6.6191;6.594;6.5659;6.1777;6.1527;6.1316;6.1245 -;-;+;-;-;-;-;-;-;- + 1629 + 1 1.258 190432.0 1.0 10935 5662 16581 HBL1_DMSO_200M_050219_1,16599 HBL1_DMSO_200M_050219_1,16599,DAYLQSLAKKI True True DAYLQSLAKKI 80.388128 417.243823230267 5667674.0 16581.0 ENSG00000148296|ENST00000372022|SURF6 6.703976631164551 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16600 80.389 47.0 1499800.0 25 0 217990.0 1896 ALYSDRSI 8 84 462.7438414389623 923.4731299447244 2 462.7444335818291 MULTI CID FTMS 0 0 0 16581 487604.75 0.1025190402662946 -24 2.0605926513671875 19 Unmodified _ALYSDRSI_ ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5 13.50788311687929 0.7113601687236069 3 [{I|L}A]PM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HV 8 5 + 37.4 0.0 0.0 4.05 4.05 74.331 0.0 0.0 0.0 22.2062251842808 0.8458509741833353 0.8458509741833353 3.0102999566398125 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]PM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HV;[{I|L}A]{I|L}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HV 4.05;3.724 -;- 97 + 1 1.258 60494.9 1.0 10936 5662 16581 HBL1_DMSO_200M_050219_1,16600 HBL1_DMSO_200M_050219_1,16600,ALYSDRSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16601 80.396 365.0 432570.0 25 0 37537.0 + 38247 TPVLRRHRYSI 11 169 466.60810476811895 1396.8024849045569 3 466.6082641482353 MULTI CID FTMS 0 0 0 16581 418830.875 0.6330801564671955 5 -0.313385009765625 20 Unmodified _TPVLRRHRYSI_ ENSG00000152580|ENST00000282466|IGSF10 6.2057823575117 0.8458686499021061 3 G{I|L}VP[{M(Oxidation (M))|F}T]TV 8 10 30.012 0.0 0.0 2.1486 0.0 0.0 564.372923217401 0.0 564.372923217401 0.0 17.247697618034785 0.0 0.0 0 0.0 0.0 0.6022338482433752 0.0 G{I|L}VP[{M(Oxidation (M))|F}T]TV 2.1486 - 951 + 1 1.258 135460.9 1.0 10937 5662 16581 HBL1_DMSO_200M_050219_1,16601 HBL1_DMSO_200M_050219_1,16601,TPVLRRHRYSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16603 80.4 30.0 1325400.0 25 0 111750.0 + 5572 DMYEQFQNI 9 75 594.2553221062653 1186.4960912793306 2 594.2562744021416 MULTI CID FTMS 0 0 0 16602 2273891.0 0.7192710783968722 -3 0.1916885375976562 1 Unmodified _DMYEQFQNI_ ENSG00000100883|ENST00000216774|SRP54;ENST00000553923.1_1_14:35483969-35488318:+|nuORF;ENST00000556445.1_1_14:35487839-35488318:+|nuORF;nc|ENSG00000100883|P61011-2|SRP54 32.30548876998284 0.1201446275138228 3 [MD]YEQ 5 4 38.594 0.0 0.0 3.2528 0.0 0.0 0.0 517.237887504193 517.237887504193 22.90804351157825 0.0 0.0 0.0 0 0.0 2.0 0.2396518287104437 0.0 + [MD]YEQ 3.2528 + + 101 1 1.258 38393.9 1.0 10938 5663 16602 HBL1_DMSO_200M_050219_1,16603 HBL1_DMSO_200M_050219_1,16603,DMYEQFQNI True True DMYEQFQNI 80.400017 594.256274402142 87467166.0 16602.0 ENST00000553923.1_1_14:35483969-35488318:+|nuORF;;nc|ENSG00000100883|P61011-2|SRP54;;ENST00000556445.1_1_14:35487839-35488318:+|nuORF;;ENSG00000100883|ENST00000216774|SRP54 7.475581487019856 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16604 80.401 27.0 1355400.0 25 0 96709.0 -1 PLLDHCHVT 9 70 546.2680972882638 1090.5216416433277 2 546.2698242068291 MULTI CID FTMS 0 0 0 16602 638562.6875 0.7646669201834512 3 -0.23577880859375 2 Carbamidomethyl (C) _PLLDHC(Carbamidomethyl (C))HVT_ ENSG00000159307|ENST00000360835|SCUBE1 13.50788311687929 0.4710407108020397 3 [{M(Oxidation (M))|F}V][YQ]V{I|L}M 7 -1 31.955 0.0 0.0 2.9303 0.0 0.0 0.0 207.1142519586547 207.1142519586547 17.7334196030246 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{M(Oxidation (M))|F}V][YQ]V{I|L}M 2.9303 - 171 + 1 1.258 37846.5 1.0 10939 5663 16602 HBL1_DMSO_200M_050219_1,16604 HBL1_DMSO_200M_050219_1,16604,PLLDHCHVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16605 80.403 91.0 1173900.0 25 0 128680.0 + 15373 IPNFDVREI 9 127 551.7980959249381 1101.5816389166762 2 551.7998535037041 MULTI CID FTMS 0 0 0 16602 718635.3125 0.1911969167619921 -3 0.1916885375976562 3 Unmodified _IPNFDVREI_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 43.77239144664712 0.0547478964384323 3 {I|L}PN{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L} 9 0 + 82.572 0.0 0.0 7.4958 7.4958 92.123 0.0 0.0 0.0 50.59481935978987 12.191512336730028 12.191512336730028 9.208187539523747 0 0.3494850021680094 1.5228787452803376 0.0 1.0994850021680094 + + {I|L}PN{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L};{I|L}PGG{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L};{I|L}PN{M(Oxidation (M))|F}DV[W{I|L}]V;{I|L}PGG{M(Oxidation (M))|F}DV[W{I|L}]V;{I|L}PN[YV][WP]T{I|L};{I|L}PN[WP][YV]T{I|L};{I|L}{I|L}[MN]DV{[RE]|[WV]}{I|L};{I|L}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}S[WP]T{I|L};[{I|L}P]N{M(Oxidation (M))|F}V[KT]V{[QG]|[NA]};[{I|L}P]N{M(Oxidation (M))|F}{I|L}[KS]V{[QG]|[NA]} 7.4958;6.6598;6.3271;4.8104;4.3444;4.2117;4.0244;1.9383;1.2974;1.2095 +;-;-;-;-;-;-;-;-;- + 701 + 1 1.258 91008.8 1.0 10940 5663 16602 HBL1_DMSO_200M_050219_1,16605 HBL1_DMSO_200M_050219_1,16605,IPNFDVREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16606 80.408 241.0 740300.0 25 0 38425.0 + 11480 GIIGGLTSV 9 91 816.4840344779808 815.4767580113808 1 816.4842407107353 MULTI CID FTMS 0 0 0 16602 610662.75 0.8828660923120851 -1 0.0456924438476562 4 Unmodified _GIIGGLTSV_ ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D 97.07464715276576 0.0121042244793311 3 {[VA]|[{I|L}G]}GG{I|L}{I|L}TSV 9 2 + 62.814 0.0 0.0 7.7027 7.7027 82.628 0.0 0.0 0.0 3.65279269351241 26.42754318756652 3.65279269351241 1.249387366082999 0 1.4916440611282624 0.0 0.805462187404089 0.0 {[VA]|[{I|L}G]}GG{I|L}{I|L}TSV;{[VA]|[{I|L}G]}G{I|L}G{I|L}TSV;{[VA]|[{I|L}G]}GG{I|L}T{I|L}SV;{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}{I|L}TSV;{[VA]|[{I|L}G]}G{I|L}GT{I|L}SV;{[VA]|[{I|L}G]}GT{I|L}G{I|L}SV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}G{I|L}TSV;{[VA]|[{I|L}G]}{I|L}GG{I|L}TSV;{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}T{I|L}SV;{[VA]|[{I|L}G]}N{I|L}{I|L}TSV 7.7027;7.5495;7.3945;7.2446;7.2413;7.238;7.0914;6.9418;6.9364;6.9083 -;-;-;-;-;-;-;+;-;- + 1878 1 1.258 129303.1 1.0 10941 5663 16602 HBL1_DMSO_200M_050219_1,16606 HBL1_DMSO_200M_050219_1,16606,GIIGGLTSV True True GIIGGLTSV 80.407744 816.484240710735 5524507.0 16602.0 ENSG00000048707|ENST00000620676|VPS13D;;nc|ENSG00000048707|Q5THJ4-2|VPS13D 6.495844682057698 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16607 80.412 248.0 845300.0 25 0 99344.0 + 21722 LPLTLLYLF 9 203 546.8400286134854 1091.6655042937707 2 546.8391601443291 MULTI CID FTMS 0 0 0 16602 584782.375 0.1612964718781137 -6 0.4610214233398437 5 Unmodified _LPLTLLYLF_ REV__ENST00000508394.6_1_12:54575629-54575743:-|nuORF 14.581692164780916 0.4419739649577144 3 [{I|L}P]{I|L}VME{M(Oxidation (M))|F} 7 -1 30.59 0.0 0.0 2.8021 0.0 0.0 0.0 259.22102122175824 259.22102122175824 16.662188058425116 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [{I|L}P]{I|L}VME{M(Oxidation (M))|F} 2.8021 - 890 1 1.258 167140.0 1.0 10942 5663 16602 HBL1_DMSO_200M_050219_1,16607 HBL1_DMSO_200M_050219_1,16607,LPLTLLYLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16608 80.417 270.0 316410.0 25 0 42954.0 -1 0 88 1016.1426258711776 3045.4060482137324 3 1016.478442370892 MULTI CID FTMS 0 0 0 16602 535294.75 0.9628011438884044 1 -0.0716781616210937 6 3 PWS 3 -1 16.682 0.0 0.0 0.54779 0.0 0.0 2346.099909152989 326.13727747135005 2672.237186624339 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 PWS 0.54779 - 480 + 1 1.258 64269.6 1.0 10943 5663 16602 HBL1_DMSO_200M_050219_1,16608 HBL1_DMSO_200M_050219_1,16608, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16609 80.419 60.0 768170.0 25 0 150070.0 + 21083 LPAGINSIV 9 73 442.2659740038761 882.5173950745523 2 442.2669860720634 MULTI CID FTMS 0 0 0 16602 549336.125 0.5724240624769207 -4 0.3342819213867187 7 Unmodified _LPAGINSIV_ ENSG00000047315|ENST00000314595|POLR2B 24.67388899826682 0.2172451872415813 3 [{I|L}P]Q{I|L}[NS][{I|L}V] 8 2 + 23.082 0.0 0.0 2.6155 2.6155 67.858 0.0 0.0 0.0 8.47804375441612 -15.740312677277188 -15.740312677277188 0.9691001300805624 0 0.0 1.3979400086720375 0.5 0.0 [{I|L}P]Q{I|L}[NS][{I|L}V];[{I|L}P]D{I|L}[DV][{I|L}V];[{I|L}P]Q[WK][{I|L}V];[{I|L}P][AG]{I|L}[NS][{I|L}V];{[QG]|[NA]}{I|L}P{NN|[MP]|[D{I|L}]|[EV]}K{I|L};[QP]{I|L}{I|L}[NS][{I|L}V];[{I|L}P][AG][WK][{I|L}V];{[QG]|[NA]}{I|L}P[{I|L}A][VS]V 2.6155;2.5057;1.6637;1.566;1.1493;0.78007;0.60646;0.31721 -;-;-;+;-;-;-;- + 144 1 1.258 40970.5 1.0 10944 5663 16602 HBL1_DMSO_200M_050219_1,16609 HBL1_DMSO_200M_050219_1,16609,LPAGINSIV False True LPAGINSIV 80.418878 442.266986072063 6975070.5 16602.0 ENSG00000047315|ENST00000314595|POLR2B 2.010302702585856 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16610 80.424 273.0 401880.0 25 0 31584.0 + 16911 KIISEEHWYL 10 138 659.3450447071127 1316.6755364810251 2 659.3427001833916 MULTI CID FTMS 0 0 0 16602 422497.03125 1.0 0 0.0 8 Unmodified _KIISEEHWYL_ ENSG00000135698|ENST00000258169|MPHOSPH6;ENST00000566748.1_1_16:82195896-82197796:-|nuORF 62.57269311338072 0.0298375429882549 3 K{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L}V 9 7 39.377 0.0 0.0 2.9907 0.0 0.0 0.0 211.07326685123283 211.07326685123283 -6.413538971258291 0.0 -6.413538971258291 0.0 0 0.7887254899964358 0.585026652029182 0.8807196863200843 0.0 K{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L}V 2.9907 - 2459 + 1 1.258 86886.3 1.0 10945 5663 16602 HBL1_DMSO_200M_050219_1,16610 HBL1_DMSO_200M_050219_1,16610,KIISEEHWYL True True KIISEEHWYL 80.423924 659.342700183392 4394269.5 16602.0 ENSG00000135698|ENST00000258169|MPHOSPH6;;ENST00000566748.1_1_16:82195896-82197796:-|nuORF 4.93773627281189 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16611 80.43 310.0 451140.0 25 0 52893.0 + -1 DIYNSDPLI 9 95 1049.5146352168638 0 1049.513476550579 PEAK CID FTMS 0 0 0 16602 354497.375 1.0 0 0.0 9 ENSG00000074416|ENST00000265052|MGLL;nc|ENSG00000074416|Q99685-2|MGLL;nc|ENSG00000074416|Q99685|MGLL 3 {M(Oxidation (M))|F}S{I|L}PDSNY 8 -1 56.668 0.0 0.0 2.7023 0.0 0.0 945.4802459202529 225.0891207330688 1170.5693666533216 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3979400086720375 1.110924374808178 {M(Oxidation (M))|F}S{I|L}PDSNY 2.7023 - 1644 + 1 1.258 95014.9 1.0 10946 5663 16602 HBL1_DMSO_200M_050219_1,16611 HBL1_DMSO_200M_050219_1,16611, False False DIYNSDPLI 80.429617 1049.51347655058 2836061.0 16602.0 ENSG00000074416|ENST00000265052|MGLL;;nc|ENSG00000074416|Q99685-2|MGLL;;nc|ENSG00000074416|Q99685|MGLL 6.6899746259053545 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16612 80.437 402.0 372290.0 25 0 37056.0 + 14142 IAYSNSSGK 9 159 309.4904109860205 925.4494035582616 3 309.4899780154228 MULTI CID FTMS 0 0 0 16602 355126.875 0.2820549935830594 -23 1.944541931152344 10 Unmodified _IAYSNSSGK_ REV__ENSG00000083845|ENST00000196551|RPS5 6.723162845929126 0.6799819581413107 3 {I|L}{M(Oxidation (M))|F} 2 -1 19.464 0.0 0.0 2.1032 0.0 0.0 647.3031494202185 0.0 647.3031494202185 0.0 5.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 2.1032 - 124 1 1.258 121790.5 1.0 10947 5663 16602 HBL1_DMSO_200M_050219_1,16612 HBL1_DMSO_200M_050219_1,16612,IAYSNSSGK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16613 80.443 343.0 934300.0 25 0 91817.0 5910 DPYMDTTL 8 184 478.2091679885692 954.4037830439383 2 478.7113830447197 MULTI CID FTMS 0 0 0 16602 379344.90625 0.2355346392999495 -23 1.944541931152344 11 Unmodified _DPYMDTTL_ ENSG00000163755|ENST00000296051|HPS3;ENST00000486530.1_1_3:148847510-148871436:+|nuORF;nc|ENSG00000163755|Q969F9-2|HPS3 13.50788311687929 0.7113601687236069 3 [DP]YR{I|L}T{I|L} 7 3 38.153 0.0 0.0 3.9976 0.0 0.0 0.0 92.91946822410104 92.91946822410104 17.998037644757055 0.0 0.0 0.0 0 0.0 1.0 0.7614393726401688 0.2614393726401688 [DP]YR{I|L}T{I|L} 3.9976 - 2729 1 1.258 242325.8 1.0 10948 5663 16602 HBL1_DMSO_200M_050219_1,16613 HBL1_DMSO_200M_050219_1,16613,DPYMDTTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16614 80.448 294.0 171590.0 25 0 12066.0 + 24060 LWYYFRLLVPE 11 71 749.9088012576103 0 749.9088012576103 PEAK CID FTMS 0 0 0 -1 0 12 Unmodified _LWYYFRLLVPE_ REV__ENSG00000102384|ENST00000682095|CENPI;REV__nc|ENSG00000102384|Q92674-2|CENPI 5.731851221503515 0.47618401536486 3 {I|L}TE{M(Oxidation (M))|F} 4 -1 21.102 0.0 0.0 1.4089 0.0 0.0 766.4154896228393 238.1205080621704 1004.5359976850096 0.0 0.0 0.0 0.0 0 0.0 0.0 1.305462187404089 0.0 {I|L}TE{M(Oxidation (M))|F} 1.4089 - 154 + 1 1.258 44498.0 1.0 10949 5663 16602 HBL1_DMSO_200M_050219_1,16614 HBL1_DMSO_200M_050219_1,16614,LWYYFRLLVPE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16615 80.454 306.0 158820.0 25 0 11533.0 -1 TLPIFIIMSL 10 101 582.3405029177666 0 582.3405029177666 PEAK CID FTMS 0 0 0 -1 0 13 Oxidation (M) _TLPIFIIM(Oxidation (M))SL_ ENSG00000143199|ENST00000367851|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;nc|ENSG00000143199|Q96PN6-4|ADCY10 6.723162845929126 0.3961065659209837 3 T 1 -1 6.9897 0.0 0.0 0.60118 0.0 0.0 723.4494862048706 335.13865076236567 1058.5881369672363 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.60118 + + 22 + 1 1.258 42679.3 1.0 10950 5663 16602 HBL1_DMSO_200M_050219_1,16615 HBL1_DMSO_200M_050219_1,16615,TLPIFIIMSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16616 80.461 328.0 529480.0 25 0 27118.0 + 4091 DANPFLQSV 9 112 990.4883595871952 989.4810831205951 1 990.4903442263604 MULTI CID FTMS 0 0 0 16602 224379.53125 0.5228642156335865 -5 0.3901519775390625 14 Unmodified _DANPFLQSV_ ENSG00000099917|ENST00000263205|MED15;ENST00000473244.5_1_22:20936789-20940988:+|nuORF;ENST00000489651.5_1_22:20929276-20940988:+|nuORF;ENST00000492381.5_1_22:20909161-20940988:+|nuORF;ENST00000493216.1_1_22:20939554-20940988:+|nuORF;nc|ENSG00000099917|Q96RN5-2|MED15;nc|ENSG00000099917|Q96RN5-3|MED15 79.42699986076722 0.0176555798755335 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DANQSV 9 5 + 80.209 0.0 0.0 8.1062 8.1062 87.062 0.0 0.0 0.0 8.094107541998966 16.478174818886366 8.094107541998966 3.4550611459063845 0 0.5418727718234408 1.5228787452803376 0.785666875892183 1.1861818737241734 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DANQSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QDGQSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}NWQSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DQGQSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DAGGQSV;{[DA]|[EG]}NP{M(Oxidation (M))|F}{I|L}QSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}NEGQSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DAN[AG]SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N{[DA]|[EG]}{I|L}QSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QDG[AG]SV 8.1062;7.757;7.601;7.5075;7.3291;7.2882;7.2032;7.1756;7.0781;6.8264 -;-;-;-;-;+;-;-;-;- + 3821 1 1.258 115075.1 1.0 10951 5663 16602 HBL1_DMSO_200M_050219_1,16616 HBL1_DMSO_200M_050219_1,16616,DANPFLQSV True True DANPFLQSV 80.461211 990.49034422636 24779343.0 16602.0 ENSG00000099917|ENST00000263205|MED15;;ENST00000489651.5_1_22:20929276-20940988:+|nuORF;;ENST00000493216.1_1_22:20939554-20940988:+|nuORF;;ENST00000473244.5_1_22:20936789-20940988:+|nuORF;;nc|ENSG00000099917|Q96RN5-3|MED15;;nc|ENSG00000099917|Q96RN5-2|MED15;;ENST00000492381.5_1_22:20909161-20940988:+|nuORF 8.11336119969686 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16617 80.468 354.0 68429.0 25 0 3978.6 + -1 HCVCDMHWHHL 11 64 737.7966796755791 0 737.7966796755791 PEAK CID FTMS 0 0 0 -1 0 15 Carbamidomethyl (C) _HC(Carbamidomethyl (C))VCDMHWHHL_ REV__ENST00000306353.7_2_2:85828206-85829758:-|nuORF;REV__ENST00000444380.5_1_2:85828554-85829758:-|nuORF;REV__ENST00000455852.1_1_2:85828554-85830202:-|nuORF 1.4819007175156935 0.4761840153648598 3 S 1 -1 1.9897 0.0 0.0 0.13503 0.0 0.0 663.2121204822143 720.3039644830686 1383.516084965283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.13503 - 1 + 1 1.258 23901.8 1.0 10952 5663 16602 HBL1_DMSO_200M_050219_1,16617 HBL1_DMSO_200M_050219_1,16617,HCVCDMHWHHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16619 80.472 1.8 25108000.0 25 0 3752300.0 + 37303 TIRYPDPLI 9 59 544.3109498194198 1086.6073467056394 2 544.3113281130791 MULTI CID FTMS 0 0 0 16618 29895714.0 0.9516528600981788 1 -0.0463714599609375 1 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 41.95555342248728 0.0647214845423414 3 [{I|L}T]RY[DP]P{I|L}{I|L} 9 0 + 57.642 0.0 0.0 5.3048 5.3048 89.736 0.0 0.0 0.0 17.727562184969372 42.15735931149851 17.727562184969372 57.64190937653879 0 1.2302046884880935 1.6989700043360187 0.4247425010840047 0.0 + + [{I|L}T]RY[DP]P{I|L}{I|L} 5.3048 + + 66 1 1.236 42859.8 1.0 10953 5664 16618 HBL1_DMSO_200M_050219_1,16619 HBL1_DMSO_200M_050219_1,16619,TIRYPDPLI True True TIRYPDPLI 80.471694 544.311328113079 2795125248.0 16618.0 ENSG00000198034|ENST00000316084|RPS4X;;ENSG00000280969|ENST00000629237|RPS4Y2 5.253689606984456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16620 80.473 2.4 15561000.0 25 0 2685300.0 40955 VLVGERIIV 9 57 499.3237451479776 996.6329373627552 2 499.3240234255791 MULTI CID FTMS 0 0 0 16618 17753424.0 0.5501151858469864 2 -0.1641006469726562 2 Unmodified _VLVGERIIV_ ENSG00000197702|ENST00000334956|PARVA;ENST00000530755.5_1_11:12399134-12499642:+|nuORF;ENST00000533345.5_1_11:12419899-12534890:+|nuORF;nc|ENSG00000197702|Q9NVD7-2|PARVA 19.256988751693697 0.3154191944385105 3 V{I|L}V 3 6 31.198 0.0 0.0 3.1303 0.0 0.0 667.4016461338479 0.0 667.4016461338479 0.0 16.593793813122062 0.0 0.0 0 0.5 0.0 0.0 0.0 + V{I|L}V 3.1303 + + 30 1 1.236 33789.8 1.0 10954 5664 16618 HBL1_DMSO_200M_050219_1,16620 HBL1_DMSO_200M_050219_1,16620,VLVGERIIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16621 80.474 3.9 12902000.0 25 0 1580900.0 + 14626 IIIPEIQKV 9 64 526.8391643272683 1051.6637757213366 2 526.8395873904228 MULTI CID FTMS 0 0 0 16618 11897201.0 0.953499243833456 -2 0.11737060546875 3 Unmodified _IIIPEIQKV_ ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;nc|ENSG00000124207|P55060-3|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L 18.1463463914782 0.3454829746528889 3 {I|L}{I|L}{I|L}[EP]{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 36.589 0.0 0.0 3.4792 3.4792 80.364 0.0 0.0 0.0 15.16257482205355 1.8842499412940648 1.8842499412940648 9.208187539523756 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}{I|L}{I|L}[EP]{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}{I|L}[EP]{I|L}[AG]{[QV]|[N{I|L}]|[RA]|[KV]} 3.4792;2.6036 +;- + 105 + 1 1.236 46995.1 1.0 10955 5664 16618 HBL1_DMSO_200M_050219_1,16621 HBL1_DMSO_200M_050219_1,16621,IIIPEIQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16622 80.475 17.0 4162600.0 25 0 1301700.0 + + 7130 YYYDGDIGNYYY 12 84 784.8142597270183 1567.6139665208366 2 784.8151122927666 MULTI CID FTMS 0 0 0 16618 4270321.0 0.4627158184903379 -2 0.11737060546875 4 Unmodified _EEMWLDQEYYY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 12.240655878213236 0.7805268987462184 3 YYD[DG]Y{[VA]|[{I|L}G]}NYYY 12 -1 + 53.763 0.0 0.0 3.4296 3.4296 77.379 0.0 0.0 0.0 6.930596020448348 4.648415687162952 4.648415687162952 6.930596020448348 0 0.7429928190999391 2.0 0.4247425010840047 0.8494850021680094 YYD[DG]Y{[VA]|[{I|L}G]}NYYY;{[YD]|[{M(Oxidation (M))|F}M]}[DG]Y{[{M(Oxidation (M))|F}H]|[RQ]}YYYY;YYYD[DG]{[VA]|[{I|L}G]}NYYY;YYDY[DG]{[VA]|[{I|L}G]}NYYY;{[YD]|[{M(Oxidation (M))|F}M]}[DG]YY{[VA]|[{I|L}G]}NYYY;{[YD]|[{M(Oxidation (M))|F}M]}[DG]{I|L}NGYYYYY;{[YD]|[{M(Oxidation (M))|F}M]}[DG]{[{M(Oxidation (M))|F}H]|[RQ]}YYYYY;{[YD]|[{M(Oxidation (M))|F}M]}[DG]YY{[{M(Oxidation (M))|F}H]|[RQ]}YYY;{[YD]|[{M(Oxidation (M))|F}M]}Y[DG]{[{M(Oxidation (M))|F}H]|[RQ]}YYYY;YYNG[HM]S[HA]YYY 3.4296;2.9875;2.9161;2.8543;2.611;2.5468;2.5245;2.4936;2.3888;2.1154 -;-;-;-;-;-;-;-;-;- 937 1 1.236 55072.3 1.0 10956 5664 16618 HBL1_DMSO_200M_050219_1,16622 HBL1_DMSO_200M_050219_1,16622,EEMWLDQEYYY False False YYYDGDIGNYYY 80.475244 784.815112292767 81439584.0 16618.0 ENSG00000196591|ENST00000519065|HDAC2;;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 2.6848317782084146 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16623 80.476 17.0 2787400.0 25 0 613170.0 42604 VTRRRQLF 8 65 538.327487619804 1074.6404223064078 2 538.3276244997978 MULTI CID FTMS 0 0 0 16618 3436376.75 0.4012931936995468 -2 0.11737060546875 5 Unmodified _VTRRRQLF_ ENST00000546265.1_1_12:11199669-11273613:-|nuORF 0.6903765706972694 0.8201419426409876 3 E 1 8 2.2185 0.0 0.0 0.20644 0.0 0.0 866.5528501401953 76.02503381900624 942.5778839592016 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20644 - 3 + 1 1.236 40924.5 1.0 10957 5664 16618 HBL1_DMSO_200M_050219_1,16623 HBL1_DMSO_200M_050219_1,16623,VTRRRQLF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16624 80.478 10.0 3376100.0 25 0 416920.0 + 21964 LPPNHILEI 9 67 523.3041480219179 1044.5937431106356 2 523.3060180544853 MULTI CID FTMS 0 0 0 16618 2694903.0 0.6624187993110351 -7 0.5326995849609375 6 Unmodified _LPPNHILEI_ ENSG00000105397|ENST00000525621|TYK2 32.30548876998284 0.1201446275138228 3 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}P{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L} 9 7 + 46.466 0.0 0.0 4.4483 4.4483 74.077 0.0 0.0 0.0 22.08072959193734 12.82104226921453 12.82104226921453 2.09544243948811 0 0.0 1.0 0.7134679910804405 0.0 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}P{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};[{I|L}P][HN]P{I|L}E{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}P{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{[QG]|[NA]}E{I|L};[{I|L}P][HN]{I|L}PE{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}P{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}{I|L}P{[C(Carbamidomethyl (C))G]|[NC]}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}P[WK]E{I|L};[{I|L}P][HN]{I|L}EP{I|L}{I|L} 4.4483;4.2477;4.222;4.1601;4.1462;3.9595;3.9338;3.7652;3.6946;3.6713 -;-;-;-;-;-;-;-;-;- 278 + 1 1.236 35016.4 1.0 10958 5664 16618 HBL1_DMSO_200M_050219_1,16624 HBL1_DMSO_200M_050219_1,16624,LPPNHILEI True True LPPNHILEI 80.4776 523.306018054485 87916168.0 16618.0 ENSG00000105397|ENST00000525621|TYK2 4.254929224650065 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16625 80.479 20.0 2651900.0 25 0 625000.0 + 12397 GTIGLIHAI 9 82 447.7733977839752 893.5322426347504 2 447.7728454470634 MULTI CID FTMS 0 0 0 16618 1540974.5 0.3514472293594888 4 -0.2542648315429687 7 Unmodified _GTIGLIHAI_ ENSG00000118939|ENST00000377595|UCHL3;ENST00000563635.5_1_13:76123956-76287321:+|nuORF 34.18733598223924 0.1073653526364521 3 [HA]{I|L}VA{I|L} 6 6 17.88 0.0 0.0 2.0011 0.0 0.0 0.0 286.1371980393005 286.1371980393005 -1.8830355872139075 0.0 -1.8830355872139075 0.0 0 0.0 0.0 0.0 0.0 [HA]{I|L}VA{I|L} 2.0011 - 227 1 1.236 46306.9 1.0 10959 5664 16618 HBL1_DMSO_200M_050219_1,16625 HBL1_DMSO_200M_050219_1,16625,GTIGLIHAI True True GTIGLIHAI 80.478779 447.772845447063 66843804.0 16618.0 ENSG00000118939|ENST00000377595|UCHL3;;ENST00000563635.5_1_13:76123956-76287321:+|nuORF 2.3966455459594727 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16626 80.483 222.0 1365400.0 25 0 128540.0 + 23170 EPLLTRIV 8 173 470.7261422116269 939.4377314900538 2 470.7264587283134 MULTI CID FTMS 0 0 0 16618 1032506.1875 0.3542742242770575 -6 0.4618301391601562 8 Unmodified _LSQYAMDI_ ENST00000536283.1_1_12:49350264-49350291:-|nuORF 30.63653989081413 0.3996269429323407 3 {I|L}A{I|L} 3 5 40.315 0.0 0.0 4.2914 0.0 0.0 0.0 639.2113311695535 639.2113311695535 12.651408691332705 0.0 0.0 0.0 0 0.3403776857613406 1.5228787452803376 0.0 0.0 {I|L}A{I|L} 4.2914 - 1388 + 1 1.236 228716.3 1.0 10960 5664 16618 HBL1_DMSO_200M_050219_1,16626 HBL1_DMSO_200M_050219_1,16626,LSQYAMDI False False EPLLTRIV 80.482961 470.726458728313 6525492.0 16618.0 ENST00000536283.1_1_12:49350264-49350291:-|nuORF 3.8663907845815024 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16627 80.484 63.0 911550.0 25 0 163410.0 + -1 ALLDFTCT 8 71 314.1533594121321 939.4382488365964 3 314.1531249880791 MULTI CID FTMS 0 0 0 16618 1034008.4375 0.3736617039448994 -6 0.4618301391601562 9 Carbamidomethyl (C) _ALLDFTC(Carbamidomethyl (C))T_ REV__ENST00000219478.10_1_16:4800958-4801270:-|nuORF 15.847184025352805 0.6768015514314958 3 [{I|L}A]{I|L} 3 -1 33.952 0.0 0.0 3.6141 0.0 0.0 0.0 639.2109058037129 639.2109058037129 25.0 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}A]{I|L} 3.6141 + + 22 + 1 1.236 53622.2 1.0 10961 5664 16618 HBL1_DMSO_200M_050219_1,16627 HBL1_DMSO_200M_050219_1,16627,ALLDFTCT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16628 80.486 59.0 1257600.0 25 0 181710.0 + 13211 HGMIMLRI 8 106 485.76934583357854 969.5241387339572 2 485.7701599001884 MULTI CID FTMS 0 0 0 16618 680045.375 0.0915218810852102 -5 0.4059600830078125 10 Unmodified _HGMIMLRI_ ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1 56.541270873467816 0.1144128637334507 3 HGM{I|L} 4 4 54.724 0.0 0.0 5.6445 0.0 0.0 0.0 528.2989224005725 528.2989224005725 23.42140579817222 0.0 0.0 0.0 0 1.424742501084005 1.154901959985743 0.0 0.0 + HGM{I|L} 5.6445 + + 167 + 1 1.236 60443.9 1.0 10962 5664 16618 HBL1_DMSO_200M_050219_1,16628 HBL1_DMSO_200M_050219_1,16628,HGMIMLRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16629 80.488 120.0 755340.0 25 0 84077.0 + 4345 DASLVFKV 8 101 439.752570102468 877.4905872717361 2 439.7525817751884 MULTI CID FTMS 0 0 0 16618 643914.75 0.0294074683850696 10 -0.4520416259765625 11 Unmodified _DASLVFKV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602816-23603164:-|nuORF 54.773552608820026 0.1167943196628344 3 {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV 8 0 + 69.076 0.0 0.0 7.8719 7.8719 94.652 0.0 0.0 0.0 53.13339731750148 11.222420413415662 11.222420413415662 12.727570391735568 0 1.0941876774005248 2.0 0.0 0.2302046884880938 + + {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV;{[DA]|[EG]}S{I|L}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 7.8719;6.4215 +;- + 138 + 1 1.236 77472.3 1.0 10963 5664 16618 HBL1_DMSO_200M_050219_1,16629 HBL1_DMSO_200M_050219_1,16629,DASLVFKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16630 80.494 334.0 77214.0 25 0 7425.5 -1 LTLLICHKYKK 11 62 708.9234496951103 0 708.9234496951103 PEAK CID FTMS 0 0 0 -1 0 12 Carbamidomethyl (C) _LTLLIC(Carbamidomethyl (C))HKYKK_ ENSG00000122025|ENST00000241453|FLT3;nc|ENSG00000122025|P36888-2|FLT3 1.3295316138638542 0.4761840153648598 3 P 1 -1 3.0989 0.0 0.0 0.21888 0.0 0.0 1183.710121580847 132.04599939517814 1315.7561209760252 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.21888 - 10 + 1 1.236 28822.6 1.0 10964 5664 16618 HBL1_DMSO_200M_050219_1,16630 HBL1_DMSO_200M_050219_1,16630,LTLLICHKYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16631 80.501 363.0 285410.0 25 0 31930.0 -1 0 89 1002.046191394329 0 1002.046191394329 PEAK CID FTMS 0 0 0 -1 0 13 3 {I|L}TV{I|L}STQ 7 -1 35.13 0.0 0.0 1.7547 0.0 0.0 1018.533836790808 238.12043176822505 1256.654268559033 0.0 0.0 0.0 0.0 0 0.0 0.0 1.9916440611282624 0.0 {I|L}TV{I|L}STQ 1.7547 - 2425 + 1 1.236 72815.5 1.0 10965 5664 16618 HBL1_DMSO_200M_050219_1,16631 HBL1_DMSO_200M_050219_1,16631, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16632 80.507 337.0 302160.0 25 0 117240.0 -1 LIMRCMKYLC 10 117 673.8273193240166 0 673.8273193240166 PEAK CID FTMS 0 0 0 -1 0 14 Carbamidomethyl (C),Oxidation (M) _LIM(Oxidation (M))RC(Carbamidomethyl (C))MKYLC_ ENSG00000255151|ENST00000527482|GLYATL1B 7.289230182591677 0.3953776778296116 3 PYR 3 -1 18.857 0.0 0.0 1.4013 0.0 0.0 715.2893299548706 211.10939966373283 926.3987296186034 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 PYR 1.4013 - 140 + 1 1.236 80785.8 1.0 10966 5664 16618 HBL1_DMSO_200M_050219_1,16632 HBL1_DMSO_200M_050219_1,16632,LIMRCMKYLC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16633 80.514 362.0 182190.0 25 0 16782.0 -1 WCPFACSWCWM 11 76 803.7899305095464 1605.5653080858926 2 803.7892333865166 MULTI CID FTMS 0 0 0 16618 192767.71875 1.0 0 0.0 15 3 Carbamidomethyl (C),Oxidation (M) _WC(Carbamidomethyl (C))PFAC(Carbamidomethyl (C))SWC(Carbamidomethyl (C))WM(Oxidation (M))_ ENST00000442692.2_1_11:68822646-68853210:+|nuORF 0.0 0.8751479354844584 3 YYYDY 5 -1 70.177 0.0 0.0 4.3709 0.0 0.0 0.0 835.2619112604124 835.2619112604124 55.0 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.1861818737241734 0.0 YYYDY 4.3709 - 60 + 1 1.236 52388.6 1.0 10967 5664 16618 HBL1_DMSO_200M_050219_1,16633 HBL1_DMSO_200M_050219_1,16633,WCPFACSWCWM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16635 80.518 32.0 6671100.0 25 0 927470.0 -1 0 90 336.1043917088872 670.1942304845744 2 336.1048461794853 MULTI CID FTMS 0 0 0 16634 985525.9375 0.1060851941797736 2 -0.1496429443359375 1 3 {[CP]|[EA]}S 3 -1 10.942 0.0 0.0 1.6327 0.0 0.0 0.0 380.0761714982444 380.0761714982444 6.962724883926656 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[CP]|[EA]}S 1.6327 - 9 + 1 1.236 171964.1 1.0 10968 5665 16634 HBL1_DMSO_200M_050219_1,16635 HBL1_DMSO_200M_050219_1,16635, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16636 80.522 177.0 879570.0 25 0 197130.0 -1 0 62 1142.4826224881576 3424.426038064673 3 1143.152026355267 MULTI CID FTMS 0 0 0 16634 848011.125 0.3519413116510448 3 -0.2078933715820312 2 3 ET 2 -1 11.964 0.0 0.0 0.34937 0.0 0.0 2278.8406111697177 912.4875582330686 3191.3281694027864 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 ET 0.34937 - 156 + 1 1.236 130854.3 1.0 10969 5665 16634 HBL1_DMSO_200M_050219_1,16636 HBL1_DMSO_200M_050219_1,16636, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16637 80.529 391.0 1372600.0 25 0 134630.0 + 31557 RQLESLIRL 9 222 376.567936164714 1126.681979094342 3 376.5677978396416 MULTI CID FTMS 0 0 0 16634 431213.5 0.1131017687335332 3 -0.2078933715820312 3 Unmodified _RQLESLIRL_ ENSG00000104738|ENST00000649973|MCM4;ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 110.6747026088012 0.0053351249510064 3 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}ES{I|L}{I|L}{I|L}R 9 2 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L} + + 60.527 17.205 4.3311 5.3721 5.3721 56.966 0.0 0.0 0.0 0.0 27.1669877129645 0.0 0.0 0 1.579689690656103 0.0 0.8252574989159953 0.5866968715561641 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}ES{I|L}{I|L}{I|L}R 5.3721 - 1065 + 1 1.236 421408.1 1.0 10970 5665 16634 HBL1_DMSO_200M_050219_1,16637 HBL1_DMSO_200M_050219_1,16637,RQLESLIRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16638 80.535 376.0 1505700.0 25 0 114950.0 + 10034 FPNIHPPQI 9 250 531.7899207646715 1061.5652885961429 2 531.7900878787041 MULTI CID FTMS 0 0 0 16634 376690.75 0.1347221162942926 3 -0.2078933715820312 4 Unmodified _FPNIHPPQI_ ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-3|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 123.45060196383646 0.000255189003501 3 {I|L}MN{I|L}HPPQ{I|L} 9 2 + 90.026 0.0 0.0 8.4805 8.4805 93.832 0.0 0.0 0.0 53.87056057055828 17.396227461631426 17.396227461631426 9.208187539523747 0 2.2174165578762484 2.0 0.0 1.1791746928241125 {I|L}MN{I|L}HPPQ{I|L};{I|L}MGG{I|L}HPPQ{I|L};{M(Oxidation (M))|F}PN{I|L}HPPQ{I|L};{I|L}MN{I|L}HPQP{I|L};{I|L}MN{I|L}HPPGA{I|L};{I|L}MN{I|L}HPPAG{I|L};{M(Oxidation (M))|F}PGG{I|L}HPPQ{I|L};{I|L}MGG{I|L}HPQP{I|L};{M(Oxidation (M))|F}PN{I|L}HPQP{I|L};{I|L}MN{I|L}HPPAAV 8.4805;7.6131;7.5572;7.4183;7.3492;7.0423;6.6898;6.5509;6.495;6.4547 -;-;+;-;-;-;-;-;-;- + 20153 + 1 1.236 437574.8 1.0 10971 5665 16634 HBL1_DMSO_200M_050219_1,16638 HBL1_DMSO_200M_050219_1,16638,FPNIHPPQI True True FPNIHPPQI 80.535317 531.790087878704 127398780.0 16634.0 ENSG00000182149|ENST00000378799|IST1;;nc|ENSG00000182149|P53990|IST1;;nc|ENSG00000182149|P53990-6|IST1;;nc|ENSG00000182149|P53990-3|IST1;;nc|ENSG00000182149|P53990-5|IST1 7.185426712036133 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16639 80.543 454.0 508600.0 25 0 104770.0 + 43294 WKIRLHGFPSL 11 187 677.3950112965572 1352.7754696599145 2 677.3948852419853 MULTI CID FTMS 0 0 0 16634 290881.84375 0.1450643981630429 -7 0.5082015991210938 5 Unmodified _WKIRLHGFPSL_ REV__ENST00000590121.1_1_19:12918336-12918396:+|nuORF 8.745405648335112 0.8338865417133445 3 [PS]{I|L}T{M(Oxidation (M))|F}{I|L}Q 7 -1 28.961 0.0 0.0 2.1409 0.0 0.0 0.0 563.328850357433 563.328850357433 19.03946367785656 0.0 0.0 0.0 0 0.0 0.4559319556497244 0.8116042352767734 0.0 [PS]{I|L}T{M(Oxidation (M))|F}{I|L}Q 2.1409 - 537 1 1.236 184487.9 1.0 10972 5665 16634 HBL1_DMSO_200M_050219_1,16639 HBL1_DMSO_200M_050219_1,16639,WKIRLHGFPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16640 80.552 471.0 608040.0 25 0 49389.0 31363 RNICKMGL 8 204 467.7499827380652 933.4854125429304 2 467.7495605349541 MULTI CID FTMS 0 0 0 16634 250914.671875 0.0866274110612661 -4 0.2498855590820312 6 Unmodified _RNICKMGL_ ENST00000400454.5_1_21:41516612-41539212:-|nuORF 34.18733598223924 0.3315367612694167 3 [VG]A[YN]{I|L}QAV 9 9 + 31.251 0.0 0.0 3.3478 3.3478 76.903 0.0 0.0 0.0 5.672874778693359 2.2750717254474075 2.2750717254474075 6.663865622122671 0 0.6307196863200843 1.6989700043360187 0.0 0.6861818737241735 [VG]A[YN]{I|L}QAV;[VG]{I|L}[HD][VP]PT;[VG]A[YN]{I|L}[AG]AV;[VG]{I|L}[HD][RH]T;[VG]A[YN]AAVAV;RNAA[W{M(Oxidation (M))|F}]G{I|L};RNAA[W{M(Oxidation (M))|F}]AV;R[KQ][W{M(Oxidation (M))|F}]G{I|L};R[KQ][W{M(Oxidation (M))|F}]AV;[VG]{I|L}[C(Carbamidomethyl (C))C][RK]V 3.3478;2.6339;2.3614;2.2624;2.2275;2.2186;2.1897;2.043;2.0142;1.903 -;-;-;-;-;-;-;-;-;- 2184 1 1.236 216330.2 1.0 10973 5665 16634 HBL1_DMSO_200M_050219_1,16640 HBL1_DMSO_200M_050219_1,16640,RNICKMGL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16641 80.56 497.0 449210.0 25 0 35733.0 28383 PSNCLETSL 9 198 482.2279910030984 962.4414290729968 2 482.2275268435478 MULTI CID FTMS 0 0 0 16634 199582.359375 0.1423834168405744 -7 0.5082015991210938 7 Unmodified _PSNCLETSL_ ENSG00000078237|ENST00000179259|TIGAR 15.847184025352805 0.4077185912009129 3 [SG]AGA{I|L} 6 7 19.385 0.0 0.0 2.0142 0.0 0.0 0.0 503.1751986240845 503.1751986240845 1.9369749923271264 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [SG]AGA{I|L} 2.0142 - 2164 + 1 1.236 168946.9 1.0 10974 5665 16634 HBL1_DMSO_200M_050219_1,16641 HBL1_DMSO_200M_050219_1,16641,PSNCLETSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16642 80.57 530.0 565250.0 25 0 144240.0 + 39737 VEKKRDNLQPL 11 163 670.3877724846369 1338.7609920360735 2 670.3874999880791 MULTI CID FTMS 0 0 0 16634 158542.375 0.0891338226980877 -4 0.2498855590820312 8 Unmodified _VEKKRDNLQPL_ REV__ENST00000588797.5_1_19:44331593-44332023:+|nuORF 8.745405648335112 0.8338865417133445 3 {[TV]|[{I|L}S]}{I|L}GA 5 -1 20.775 0.0 0.0 1.5518 0.0 0.0 0.0 894.4786621746842 894.4786621746842 8.067336481787205 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.2614393726401688 0.0 {[TV]|[{I|L}S]}{I|L}GA 1.5518 - 376 1 1.236 223817.2 1.0 10975 5665 16634 HBL1_DMSO_200M_050219_1,16642 HBL1_DMSO_200M_050219_1,16642,VEKKRDNLQPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16643 80.578 489.0 676800.0 25 0 99637.0 + 16488 KALEEAGTILL 11 200 579.3421861616363 1156.6698193900725 2 579.3429443240166 MULTI CID FTMS 0 0 0 16634 160649.65625 0.2987190985041816 -1 0.0463714599609375 9 Unmodified _KALEEAGTILL_ ENSG00000163516|ENST00000323348|ANKZF1;ENST00000461731.5_1_2:220094544-220099084:+|nuORF;ENST00000465550.5_1_2:220096537-220099084:+|nuORF 40.72490554402381 0.2012291192650359 3 {[QN]|[E{I|L}]|[KN]}AKEAGT{I|L}{I|L}{I|L} 11 3 + 77.005 0.0 0.0 6.6575 6.6575 83.817 0.0 0.0 0.0 5.039689767179837 15.070623213458028 5.039689767179837 3.5654732351381284 0 0.5 0.7958800173440752 1.4386218330464624 0.0 {[QN]|[E{I|L}]|[KN]}AKEAGT{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}AKEQT{I|L}{I|L}{I|L};[{I|L}T]QVEAGT{I|L}{I|L}{I|L};[Q{I|L}]TVEAGT{I|L}{I|L}{I|L};[{I|L}A]GTVEAGT{I|L}{I|L}{I|L};[{I|L}T]QVEQT{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}ATVEAGT{I|L}{I|L}{I|L};[Q{I|L}]TVEQT{I|L}{I|L}{I|L};[{I|L}A]GTVEQT{I|L}{I|L}{I|L};[VP]Q{M(Oxidation (M))|F}VAGT{I|L}{I|L}{I|L} 6.6575;6.3493;6.2218;6.1232;6.1058;5.9135;5.8495;5.8149;5.7945;5.6891 -;-;-;-;-;-;-;-;-;- 8648 1 1.236 244942.4 1.0 10976 5665 16634 HBL1_DMSO_200M_050219_1,16643 HBL1_DMSO_200M_050219_1,16643,KALEEAGTILL False True KALEEAGTILL 80.578469 579.342944324017 4909156.0 16634.0 ENST00000461731.5_1_2:220094544-220099084:+|nuORF;;ENSG00000163516|ENST00000323348|ANKZF1;;ENST00000465550.5_1_2:220096537-220099084:+|nuORF 5.220335006713867 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16644 80.589 533.0 770840.0 25 0 129930.0 + 39248 VAAGRCLCR 9 173 474.7452695489239 947.4759861646478 2 474.7451354861259 MULTI CID FTMS 0 0 0 16634 154964.203125 0.0384473061533683 -5 0.3097381591796875 10 Unmodified _VAAGRCLCR_ REV__chr14:106851417-106851501|44|71.09|0.67|6.73|-|1|IGHV5-78,None|1 32.116972079565 0.1225432171549407 3 VA{[CA]|SS}{[YD]|[{M(Oxidation (M))|F}M]}PP{I|L} 9 -1 + 43.979 0.0 0.0 4.6418 4.6418 77.762 0.0 0.0 0.0 18.055118267324453 3.1336373073770574 3.1336373073770574 4.133031284438353 0 0.309894379144197 1.154901959985743 0.0 0.0 VA{[CA]|SS}{[YD]|[{M(Oxidation (M))|F}M]}PP{I|L};VG{[MG]|[TS]}{[YD]|[{M(Oxidation (M))|F}M]}PP{I|L};VA{[WT]|[RM]}{[{M(Oxidation (M))|F}D]|MM}P{I|L};VAV{[MG]|[TS]}{[{M(Oxidation (M))|F}D]|MM}P{I|L};VA{[CA]|SS}{I|L}{[{M(Oxidation (M))|F}D]|MM}P{I|L};VG{[MG]|[TS]}{I|L}{[{M(Oxidation (M))|F}D]|MM}P{I|L};VG{I|L}{[MG]|[TS]}{[{M(Oxidation (M))|F}D]|MM}P{I|L};VA{[WT]|[RM]}EET{I|L};VAV[HS]{[YC]|[HE]}AV;VAV{[MG]|[TS]}EET{I|L} 4.6418;4.2055;3.7062;3.5863;3.5863;3.1501;3.1501;2.7531;2.637;2.6332 -;-;-;-;-;-;-;-;-;- 1346 + 1 1.236 313332.6 1.0 10977 5665 16634 HBL1_DMSO_200M_050219_1,16644 HBL1_DMSO_200M_050219_1,16644,VAAGRCLCR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16645 80.603 800.0 661220.0 25 0 33225.0 + -1 CYDDMRLYRDY 11 152 793.3246058627612 1584.6346587923224 2 793.3271362185478 MULTI CID FTMS 0 0 0 16634 121343.875 0.3307598319813337 -1 0.0463714599609375 11 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))YDDM(Oxidation (M))RLYRDY_ REV__ENSG00000124160|ENST00000290231|NCOA5 0.3506318815782774 0.8734936314171269 3 [NP]{I|L}QAGV{I|L} 8 -1 68.867 0.0 0.0 4.3459 0.0 0.0 0.0 789.1583332733965 789.1583332733965 31.10924374808178 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 2.177825934852436 [NP]{I|L}QAGV{I|L} 4.3459 - 15665 1 1.236 351212.9 0.8600000143051147 10978 5665 16634 HBL1_DMSO_200M_050219_1,16645 HBL1_DMSO_200M_050219_1,16645,CYDDMRLYRDY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16646 80.617 800.0 444770.0 25 0 19351.0 43411 WRCWTWPWREW 11 179 846.3877475451735 1690.760942157147 2 846.3882934451103 MULTI CID FTMS 0 0 0 16634 113721.7890625 0.181096717594009 -1 0.0463714599609375 12 Unmodified _WRCWTWPWREW_ ENST00000374279.3_1_9:114659094-114659565:+|nuORF 0.3070304955306653 0.8736993455979228 3 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQDA{M(Oxidation (M))|F}YQV{I|L} 14 12 + 134.18 0.0 0.0 7.9361 7.9361 91.882 0.0 0.0 0.0 8.653565665482873 10.31189454565721 8.653565665482873 8.653565665482873 0 1.363364334130467 1.3979400086720375 2.9035984316004217 3.091129063296272 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQDA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]Q[AG]DA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]QDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QWGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQW{M(Oxidation (M))|F}YQV{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[C(Carbamidomethyl (C))G]|[NC]}TQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS][AG]QDA{M(Oxidation (M))|F}YQV{I|L} 7.9361;7.4243;7.4009;7.4009;7.4009;7.0909;7.0654;6.9663;6.9011;6.889 -;-;-;-;-;-;-;-;-;- 119608 1 1.236 236500.3 0.8299999833106995 10979 5665 16634 HBL1_DMSO_200M_050219_1,16646 HBL1_DMSO_200M_050219_1,16646,WRCWTWPWREW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16647 80.632 800.0 73132.0 25 0 6293.0 -1 0 60 1150.807055652142 0 1150.807055652142 PEAK CID FTMS 0 0 0 -1 0 13 3 P 1 -1 6.9897 0.0 0.0 0.30395 0.0 0.0 998.9593739001842 1200.5434054010375 2199.502779301222 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.30395 - 91 + 1 1.236 47162.2 0.6200000047683716 10980 5665 16634 HBL1_DMSO_200M_050219_1,16647 HBL1_DMSO_200M_050219_1,16647, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16649 80.636 2.6 15311000.0 25 0 1978100.0 37329 TIVWWRGTT 9 65 560.3015923871525 1118.5886318411049 2 560.3022949099541 MULTI CID FTMS 0 0 0 16648 24953970.0 0.1070449674854702 9 -0.3265838623046875 1 Unmodified _TIVWWRGTT_ ENSG00000092445|ENST00000263798|TYRO3 12.531546534597751 0.4974689918368763 3 [{I|L}T]C(Carbamidomethyl (C))PVPV 7 7 36.372 0.0 0.0 3.2516 0.0 0.0 0.0 349.1573660259872 349.1573660259872 16.986219885422432 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5649093276264391 0.0 [{I|L}T]C(Carbamidomethyl (C))PVPV 3.2516 - 320 1 1.19 36831.9 1.0 10981 5666 16648 HBL1_DMSO_200M_050219_1,16649 HBL1_DMSO_200M_050219_1,16649,TIVWWRGTT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16650 80.637 9.0 8002900.0 25 0 1266900.0 + 4631 DAYVLPKL 8 61 459.7681889261383 917.5218249190766 2 459.7683898806572 MULTI CID FTMS 0 0 0 16648 7200005.0 0.1582020081797412 6 -0.2475128173828125 2 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 32.30548876998284 0.3644845974844379 3 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 + 63.05 0.0 0.0 6.8718 6.8718 88.23 0.0 0.0 0.0 15.487192182223254 7.115591316440387 7.115591316440387 7.115591316440387 0 1.1989700043360187 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L};{[DA]|[EG]}YV{I|L}{I|L}[KP] 6.8718;6.0963 +;- + 53 + 1 1.19 66949.8 1.0 10982 5666 16648 HBL1_DMSO_200M_050219_1,16650 HBL1_DMSO_200M_050219_1,16650,DAYVLPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16651 80.638 2.5 19446000.0 25 0 2763900.0 + 12677 GVLPNIQAV 9 63 455.7712203434208 909.5278877536416 2 455.7715331912041 MULTI CID FTMS 0 0 0 16648 24584706.0 0.3730806036739432 -6 0.4274673461914062 3 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 30.22481116460888 0.1466181017706357 3 [NP]{I|L}QA 5 4 35.713 0.0 0.0 3.9266 0.0 0.0 0.0 383.2281190370979 383.2281190370979 11.047575072713158 0.0 0.0 0.0 0 0.0 1.0 0.0 0.3494850021680094 + [NP]{I|L}QA 3.9266 + + 255 1 1.19 42579.3 1.0 10983 5666 16648 HBL1_DMSO_200M_050219_1,16651 HBL1_DMSO_200M_050219_1,16651,GVLPNIQAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16652 80.639 2.6 21695000.0 25 0 3139500.0 18684 LAIWEASL 8 74 451.7527689299804 901.4909849267608 2 451.7529785037041 MULTI CID FTMS 0 0 0 16648 21798658.0 0.2782373969590303 -20 1.6554794311523438 4 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 42.96799951952854 0.1846367511955703 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 5 + 66.092 0.0 0.0 7.3315 7.3315 87.128 0.0 0.0 0.0 9.159233471901445 8.384767769392738 8.384767769392738 4.771212547196626 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{I|L}CAD{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[PS]{M(Oxidation (M))|F}APS{I|L}A{I|L} 7.3315;6.8022;6.3154;5.7862;5.2545;4.9918;4.839;4.4167;4.3376;4.3098 -;-;-;-;-;-;-;-;-;- 232 1 1.19 49932.1 1.0 10984 5666 16648 HBL1_DMSO_200M_050219_1,16652 HBL1_DMSO_200M_050219_1,16652,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16653 80.641 2.9 19301000.0 25 0 1891000.0 + 34562 SPFPDIPKV 9 76 500.27895426962647 998.543355606053 2 500.2787353396416 MULTI CID FTMS 0 0 0 16648 16252320.0 0.7586086759747966 -3 0.23577880859375 5 Unmodified _SPFPDIPKV_ ENSG00000102699|ENST00000381989|PARP4;ENST00000435945.1_1_Y:28761086-28769767:-|nuORF;ENST00000446672.2_1_13:19955792-19968894:+|nuORF 36.506200033944 0.094635877243972 3 [PS]{M(Oxidation (M))|F}PD{I|L}PKV 9 0 + 67.471 0.0 0.0 6.757 6.757 88.336 0.0 0.0 0.0 24.1373427585527 7.756766312557886 7.756766312557886 7.756766312557886 0 1.2302046884880935 1.6989700043360187 0.0 0.0 + + [PS]{M(Oxidation (M))|F}PD{I|L}PKV;[PS]{M(Oxidation (M))|F}PD{I|L}V[KP];[PS]{M(Oxidation (M))|F}PD[KP]{I|L}V 6.757;5.9802;4.4538 +;-;- + 151 + 1 1.19 46561.1 1.0 10985 5666 16648 HBL1_DMSO_200M_050219_1,16653 HBL1_DMSO_200M_050219_1,16653,SPFPDIPKV True True SPFPDIPKV 80.640512 500.278735339642 873751360.0 16648.0 ENST00000446672.2_1_13:19955792-19968894:+|nuORF;;ENSG00000102699|ENST00000381989|PARP4;;ENST00000435945.1_1_Y:28761086-28769767:-|nuORF 7.343271096547444 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16654 80.642 7.4 5071100.0 25 0 265540.0 -1 0 55 881.9051346241091 1761.795716315018 2 881.9062377810478 MULTI CID FTMS 0 0 0 16648 7855014.5 1.0 0 0.0 6 3 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}Y 13 -1 70.693 0.0 0.0 4.0126 0.0 0.0 0.0 355.1942114850908 355.1942114850908 46.53662887870195 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}Y 4.0126 - 2101 1 1.19 33320.4 1.0 10986 5666 16648 HBL1_DMSO_200M_050219_1,16654 HBL1_DMSO_200M_050219_1,16654, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16655 80.643 7.2 5668100.0 25 0 736840.0 + 45081 YPYLGPSTL 9 71 505.7633182339084 1009.5120835346167 2 505.7633849978447 MULTI CID FTMS 0 0 0 16648 7635673.5 1.0 0 0.0 7 Unmodified _YPYLGPSTL_ ENSG00000136631|ENST00000644510|VPS45;nc|ENSG00000136631|Q9NRW7-2|VPS45 34.18733598223924 0.1073653526364521 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GY 5 5 33.188 0.0 0.0 3.2875 0.0 0.0 0.0 413.2036950073736 413.2036950073736 12.926740567922437 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GY 3.2875 - 151 1 1.19 37563.7 1.0 10987 5666 16648 HBL1_DMSO_200M_050219_1,16655 HBL1_DMSO_200M_050219_1,16655,YPYLGPSTL True True YPYLGPSTL 80.642883 505.763384997845 221356320.0 16648.0 ENSG00000136631|ENST00000644510|VPS45;;nc|ENSG00000136631|Q9NRW7-2|VPS45 4.930213928222656 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16656 80.644 8.2 6841100.0 25 0 541900.0 + 44931 YPPWPGKIV 9 78 528.7980392882323 1055.5815256432645 2 528.7979003787041 MULTI CID FTMS 0 0 0 16648 6529427.5 0.2613642577176664 -20 1.6554794311523438 8 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 36.04419817259434 0.0971720506436186 3 YPPW 4 5 54.781 0.0 0.0 5.1897 0.0 0.0 0.0 509.31102551116055 509.31102551116055 37.870156338638594 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 + YPPW 5.1897 + + 117 + 1 1.19 52856.7 1.0 10988 5666 16648 HBL1_DMSO_200M_050219_1,16656 HBL1_DMSO_200M_050219_1,16656,YPPWPGKIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16657 80.645 9.8 5266600.0 25 0 1166800.0 + 16882 KIFSGVFVKV 10 85 562.346911539554 1122.6792701459078 2 562.3473388552666 MULTI CID FTMS 0 0 0 16648 6280212.5 0.2278440744514095 4 -0.1681442260742187 9 Unmodified _KIFSGVFVKV_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 28.23362336080872 0.3343390635154222 3 K{I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}V{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 54.359 0.0 0.0 4.8419 4.8419 76.767 0.0 0.0 0.0 43.389399919613965 9.889917747712644 9.889917747712644 3.0102999566398125 0 2.274227503252014 0.0 0.0 0.2742275032520141 K{I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}V{[QV]|[N{I|L}]|[RA]|[KV]};K{I|L}V[YQ]{M(Oxidation (M))|F}V{[QV]|[N{I|L}]|[RA]|[KV]};K{I|L}[H{I|L}]{[WT]|[RM]}V{[QV]|[N{I|L}]|[RA]|[KV]} 4.8419;4.5737;4.1749 -;-;- 152 + 1 1.19 47150.0 1.0 10989 5666 16648 HBL1_DMSO_200M_050219_1,16657 HBL1_DMSO_200M_050219_1,16657,KIFSGVFVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16658 80.646 10.0 3041200.0 25 0 283120.0 + 26196 NQFVQPASVGV 11 62 573.300677006193 1144.586801079186 2 573.3012573122978 MULTI CID FTMS 0 0 0 16648 5057146.0 0.1474172382648538 4 -0.1681442260742187 10 Unmodified _NQFVQPASVGV_ REV__ENST00000298295.3_1_10:45472209-45472434:-|nuORF 10.799506525563784 0.8105043987015127 3 GGQ{M(Oxidation (M))|F} 4 -1 34.425 0.0 0.0 3.0076 0.0 0.0 0.0 752.3923485247516 752.3923485247516 18.226825097560425 0.0 0.0 0.0 0 1.0 1.3010299956639813 0.0 0.4247425010840047 GGQ{M(Oxidation (M))|F} 3.0076 - 64 1 1.19 31304.6 1.0 10990 5666 16648 HBL1_DMSO_200M_050219_1,16658 HBL1_DMSO_200M_050219_1,16658,NQFVQPASVGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16659 80.648 11.0 3928600.0 25 0 265780.0 + 16906 KIIGIMEEV 9 73 516.2933887735013 1030.5722246138023 2 516.2939941287041 MULTI CID FTMS 0 0 0 16648 4628745.0 1.0 0 0.0 11 Unmodified _KIIGIMEEV_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 27.628801355627647 0.1796483985696185 3 RMEEV 5 5 41.088 0.0 0.0 3.9869 0.0 0.0 368.2799244611344 0.0 368.2799244611344 0.0 24.098630062565064 0.0 0.0 0 0.6139829889124311 0.0 0.0 0.0 RMEEV 3.9869 - 64 1 1.19 37688.4 1.0 10991 5666 16648 HBL1_DMSO_200M_050219_1,16659 HBL1_DMSO_200M_050219_1,16659,KIIGIMEEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16660 80.649 17.0 1928600.0 25 0 130940.0 + 4440 DAWKQLQTF 9 67 568.7906501869288 1135.5667474406575 2 568.7906371951103 MULTI CID FTMS 0 0 0 16648 2941400.25 1.0 0 0.0 12 Unmodified _DAWKQLQTF_ ENSG00000119673|ENST00000238651|ACOT2;ENSG00000184227|ENST00000311148|ACOT1;nc|ENSG00000119673|P49753-2|ACOT2 34.40172386719151 0.1061884637610825 3 {[DA]|[EG]}W[KQ]{I|L} 6 3 28.689 0.0 0.0 2.5264 0.0 0.0 0.0 391.1614244179738 391.1614244179738 -1.2320406081154545 0.0 -1.2320406081154545 0.0 0 0.4247425010840047 1.3979400086720375 0.3807196863200844 0.0 + {[DA]|[EG]}W[KQ]{I|L} 2.5264 + + 79 1 1.19 30279.1 1.0 10992 5666 16648 HBL1_DMSO_200M_050219_1,16660 HBL1_DMSO_200M_050219_1,16660,DAWKQLQTF True True DAWKQLQTF 80.648776 568.79063719511 49531864.0 16648.0 ENSG00000119673|ENST00000238651|ACOT2;;nc|ENSG00000119673|P49753-2|ACOT2;;ENSG00000184227|ENST00000311148|ACOT1 8.491343339284262 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16661 80.65 28.0 2562300.0 25 0 261550.0 + 15224 IPFPVEKI 8 84 471.7863078607796 941.5580627883592 2 471.7864257693291 MULTI CID FTMS 0 0 0 16648 1716490.0 0.8076026599994166 -1 0.1177291870117187 13 Unmodified _IPFPVEKI_ ENSG00000116044|ENST00000397062|NFE2L2;nc|ENSG00000116044|Q16236-2|NFE2L2;nc|ENSG00000116044|Q16236-3|NFE2L2 41.8396318013385 0.2035142800366642 3 {I|L}P{M(Oxidation (M))|F}PVEK{I|L} 8 0 + 64.249 0.0 0.0 6.8237 6.8237 88.294 0.0 0.0 0.0 48.562703380424864 11.71854814857246 11.71854814857246 7.357280815788144 0 0.6549471895720984 1.6989700043360187 0.2396518287104437 0.0 + + {I|L}P{M(Oxidation (M))|F}PVEK{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}[DP]K{I|L};{I|L}P{M(Oxidation (M))|F}PVA[VS]{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}[PG][VS]{I|L};{I|L}{I|L}MPVEK{I|L};{I|L}{I|L}M{I|L}[DP]K{I|L};{I|L}{I|L}MPVA[VS]{I|L};{I|L}{I|L}M{I|L}[PG][VS]{I|L} 6.8237;6.0423;5.4174;4.636;4.3751;3.5937;2.9688;2.1874 +;-;-;-;-;-;-;- + 267 + 1 1.19 59982.9 1.0 10993 5666 16648 HBL1_DMSO_200M_050219_1,16661 HBL1_DMSO_200M_050219_1,16661,IPFPVEKI False True IPFPVEKI 80.649955 471.786425769329 14777779.0 16648.0 nc|ENSG00000116044|Q16236-3|NFE2L2;;ENSG00000116044|ENST00000397062|NFE2L2;;nc|ENSG00000116044|Q16236-2|NFE2L2 5.000746885935466 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16662 80.651 32.0 1685500.0 25 0 166470.0 -1 0 64 620.6407649090406 1858.9004653273216 3 620.9741699099541 MULTI CID FTMS 0 0 0 16648 1458569.75 0.5837249576309383 -6 0.4274673461914062 14 3 {M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SH 8 -1 52.856 0.0 0.0 2.8434 0.0 0.0 290.12655646959485 585.3014408674106 875.4279973370055 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SH 2.8434 - 125 + 1 1.19 48144.0 1.0 10994 5666 16648 HBL1_DMSO_200M_050219_1,16662 HBL1_DMSO_200M_050219_1,16662, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16663 80.655 187.0 1005500.0 25 0 179750.0 -1 VPRSLIYLLMS 11 122 654.3745547642033 1306.7345565952064 2 654.3743163943291 MULTI CID FTMS 0 0 0 16648 1292272.375 1.0 0 0.0 15 Oxidation (M) _VPRSLIYLLM(Oxidation (M))S_ ENST00000367091.7_1_1:207078149-207078371:-|nuORF 2.735195868890462 0.8622431031272658 3 {I|L} 1 -1 9.2082 0.0 0.0 0.70467 0.0 0.0 1175.6393397756735 0.0 1175.6393397756735 0.0 6.73393743112328 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.70467 + + 13 + 1 1.19 161854.7 1.0 10995 5666 16648 HBL1_DMSO_200M_050219_1,16663 HBL1_DMSO_200M_050219_1,16663,VPRSLIYLLMS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16664 80.656 29.0 1496000.0 25 0 172870.0 + 13553 HPFPGPGLAI 10 80 503.2785292671678 1004.5425056011356 2 503.2800475955009 MULTI CID FTMS 0 0 0 16648 1144395.25 0.3309840330054113 6 -0.2475128173828125 16 Unmodified _HPFPGPGLAI_ ENSG00000163655|ENST00000496455|GMPS;nc|ENSG00000163655|P49915-2|GMPS 32.116972079565 0.2470863257317063 3 [VS][WY][PG]{I|L}A{I|L} 9 5 + 54.019 0.0 0.0 5.3775 5.3775 88.233 0.0 0.0 0.0 1.4191400539345267 16.025684359364405 1.4191400539345267 17.20114073819601 0 1.2614393726401687 2.0 0.7302046884880937 0.0 [VS][WY][PG]{I|L}A{I|L};[VS]V[{I|L}A][W{M(Oxidation (M))|F}]A{I|L};[VS]V[{I|L}A][WM]S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[PG][PG]{I|L}A{I|L};[VS][WY][{I|L}A]V[PA];[VS]V[{I|L}A][WM]TV;[H{I|L}]M[PG][PG]{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[PG][{I|L}A]V[PA] 5.3775;3.6652;3.1662;3.1378;2.1758;1.9726;1.6135;0.43388 -;-;-;+;-;-;-;- + 224 1 1.19 39318.2 1.0 10996 5666 16648 HBL1_DMSO_200M_050219_1,16664 HBL1_DMSO_200M_050219_1,16664,HPFPGPGLAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16665 80.658 86.0 673300.0 25 0 55058.0 + 10524 FVDPAQITM 9 90 511.2545661416019 1020.4945793500038 2 511.2551147341728 MULTI CID FTMS 0 0 0 16648 939673.625 0.1642739819735843 6 -0.2475128173828125 17 Unmodified _FVDPAQITM_ ENSG00000167325|ENST00000300738|RRM1 20.453626601364224 0.2830276176381075 3 [PA]QDV{M(Oxidation (M))|F}{I|L}TM 9 6 [PA]QDV{M(Oxidation (M))|F}{I|L} + + 21.454 19.133 2.4836 2.1023 2.1023 48.912 0.0 0.0 0.0 0.0 -1.332366049664099 -1.332366049664099 0.0 0 0.0 0.0 0.1989700043360188 0.0 [PA]QDV{M(Oxidation (M))|F}{I|L}TM 2.1023 - 307 + 1 1.19 51509.1 1.0 10997 5666 16648 HBL1_DMSO_200M_050219_1,16665 HBL1_DMSO_200M_050219_1,16665,FVDPAQITM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16666 80.659 47.0 1212800.0 25 0 127550.0 + 44884 YPPNPWREI 9 81 586.2983824392117 1170.5822119452232 2 586.2981445193291 MULTI CID FTMS 0 0 0 16648 918527.75 0.5088474669156998 3 -0.1243743896484375 18 Unmodified _YPPNPWREI_ ENSG00000115825|ENST00000234179|PRKD3 23.78978130925829 0.2284941198415988 3 YPPN{I|L}SA 7 5 73.805 0.0 0.0 6.305 0.0 0.0 0.0 425.18357263736567 425.18357263736567 54.36767615529696 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.4247425010840047 0.0 YPPN{I|L}SA 6.305 - 231 + 1 1.19 48113.8 1.0 10998 5666 16648 HBL1_DMSO_200M_050219_1,16666 HBL1_DMSO_200M_050219_1,16666,YPPNPWREI False True YPPNPWREI 80.659158 586.298144519329 66513388.0 16648.0 ENSG00000115825|ENST00000234179|PRKD3 6.139321962992351 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16667 80.661 85.0 1228700.0 25 0 267670.0 + 14075 IAPKLLQI 8 113 448.3025368573886 894.5905207815772 2 448.3026000857353 MULTI CID FTMS 0 0 0 16648 854586.0625 1.0 0 0.0 19 Unmodified _IAPKLLQI_ ENSG00000172139|ENST00000305815|SLC9C1;nc|ENSG00000172139|Q4G0N8-2|SLC9C1 40.44857923139169 0.2267865117615937 3 [{I|L}A]G 3 6 30.942 0.0 0.0 3.4588 0.0 0.0 0.0 650.424205434174 650.424205434174 4.2989247940391095 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}A]G 3.4588 - 377 1 1.19 85655.2 1.0 10999 5666 16648 HBL1_DMSO_200M_050219_1,16667 HBL1_DMSO_200M_050219_1,16667,IAPKLLQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16668 80.664 127.0 806070.0 25 0 89858.0 + 13319 HLATALVI 8 112 419.2633218055697 836.5120906779395 2 419.2633239626884 MULTI CID FTMS 0 0 0 16648 808981.375 1.0 0 0.0 20 Unmodified _HLATALVI_ REV__ENSG00000104728|ENST00000349830|ARHGEF10;REV__nc|ENSG00000104728|O15013-4|ARHGEF10;REV__nc|ENSG00000104728|O15013-6|ARHGEF10;REV__nc|ENSG00000104728|O15013-7|ARHGEF10;REV__nc|ENSG00000104728|O15013|ARHGEF10 59.79521254764295 0.1151759508933577 3 [H{I|L}]AT{I|L}AV{I|L} 8 -1 + 64.008 0.0 0.0 7.6518 7.6518 83.393 0.0 0.0 0.0 16.40978057358332 16.40978057358332 16.40978057358332 1.7609125905568137 0 0.3252574989159953 1.2218487496163564 0.6421590589602533 0.0 [H{I|L}]AT{I|L}AV{I|L};[H{I|L}]ATA{I|L}V{I|L};[H{I|L}]A{I|L}TAV{I|L};[H{I|L}]{I|L}ATAV{I|L};[H{I|L}]A{I|L}ATV{I|L};[H{I|L}]{I|L}AATV{I|L};[H{I|L}]AT{I|L}G{I|L}{I|L};[H{I|L}]ATAV{I|L}{I|L};[TA][H{I|L}]{I|L}AV{I|L};[TA][H{I|L}]A{I|L}V{I|L} 7.6518;7.4413;6.7689;6.5584;6.409;6.1985;5.9723;5.7618;5.6901;5.4796 -;+;-;-;-;-;-;-;-;- + 404 1 1.19 84674.7 1.0 11000 5666 16648 HBL1_DMSO_200M_050219_1,16668 HBL1_DMSO_200M_050219_1,16668,HLATALVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16670 80.668 18.0 2533900.0 25 0 251760.0 + 15374 IPNFDVREI 9 63 551.7980959249381 1101.5816389166762 2 551.7981445193291 MULTI CID FTMS 0 0 0 16669 2940130.75 0.7822381178591521 1 -0.0582504272460937 1 Unmodified _IPNFDVREI_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 23.78978130925829 0.2284941198415988 3 {I|L}PN{M(Oxidation (M))|F}DV 6 3 65.878 0.0 0.0 5.9803 0.0 0.0 0.0 413.2173250787719 413.2173250787719 34.36812845116052 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.4247425010840047 + {I|L}PN{M(Oxidation (M))|F}DV 5.9803 + + 52 + 1 1.19 44818.7 1.0 11001 5667 16669 HBL1_DMSO_200M_050219_1,16670 HBL1_DMSO_200M_050219_1,16670,IPNFDVREI False True IPNFDVREI 80.66771 551.798144519329 110390904.0 16669.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 5.316624959309896 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16671 80.669 30.0 1213000.0 25 0 82793.0 + 5573 DMYEQFQNI 9 75 594.2553221062653 1186.4960912793306 2 594.2559692263603 MULTI CID FTMS 0 0 0 16669 2081939.75 0.6585535758485409 1 -0.0582504272460937 2 Unmodified _DMYEQFQNI_ ENSG00000100883|ENST00000216774|SRP54;ENST00000553923.1_1_14:35483969-35488318:+|nuORF;ENST00000556445.1_1_14:35487839-35488318:+|nuORF;nc|ENSG00000100883|P61011-2|SRP54 21.74664581756881 0.2544899275067181 3 [MD]YE 4 5 30.177 0.0 0.0 2.5434 0.0 0.0 0.0 645.2980681682556 645.2980681682556 13.74598048369577 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [MD]YE 2.5434 + + 90 1 1.19 31792.7 1.0 11002 5667 16669 HBL1_DMSO_200M_050219_1,16671 HBL1_DMSO_200M_050219_1,16671,DMYEQFQNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16672 80.67 15.0 2660800.0 25 0 333770.0 + 25320 NAIDRLVNI 9 64 514.297978696823 1026.5814044604458 2 514.2986938357353 MULTI CID FTMS 0 0 0 16669 3167245.0 0.8549389249805937 1 -0.0582504272460937 3 Unmodified _NAIDRLVNI_ ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2 63.960520009940105 0.0238892913700936 3 {[QG]|[NA]}{I|L}DR{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 54.516 0.0 0.0 5.3104 5.3104 83.57 0.0 0.0 0.0 9.026355914538229 23.64725595156408 9.026355914538229 7.658715643802765 0 1.742992819099939 2.0 0.0 0.3494850021680094 + + {[QG]|[NA]}{I|L}DR{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};{[QG]|[NA]}{I|L}[W{I|L}]{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}ADR{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}A[W{I|L}]{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}V{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}V[RD]{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};[KA]WW[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]} 5.3104;4.5644;3.4702;2.7241;2.4532;1.9439;0.38665 +;-;-;-;-;-;- + 124 1 1.19 39279.6 1.0 11003 5667 16669 HBL1_DMSO_200M_050219_1,16672 HBL1_DMSO_200M_050219_1,16672,NAIDRLVNI True True NAIDRLVNI 80.670066 514.298693835735 34500316.0 16669.0 ENSG00000088930|ENST00000377191|XRN2;;nc|ENSG00000088930|Q9H0D6-2|XRN2 4.70687739054362 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16673 80.671 20.0 1732700.0 25 0 373080.0 28002 PMLLHVRKV 9 59 546.8400286134854 1091.6655042937707 2 546.8404418826103 MULTI CID FTMS 0 0 0 16669 2424960.75 0.6688601266717464 -2 0.1496429443359375 4 Unmodified _PMLLHVRKV_ ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB 0.6014990680409731 0.8936861360942873 3 {M(Oxidation (M))|F} 1 8 10.485 0.0 0.0 0.96042 0.0 0.0 926.5857293687692 0.0 926.5857293687692 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.96042 + + 1 + 1 1.19 32843.1 1.0 11004 5667 16669 HBL1_DMSO_200M_050219_1,16673 HBL1_DMSO_200M_050219_1,16673,PMLLHVRKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16674 80.672 18.0 1617800.0 25 0 244210.0 1892 ALWYLATS 8 49 462.7438414389623 923.4731299447244 2 462.7444030642509 MULTI CID FTMS 0 0 0 16669 1618368.0 0.3402623419022941 -19 1.5245132446289062 5 Unmodified _ALWYLATS_ nc|ENSG00000157593|Q8TB61-4|SLC35B2 10.183394434864962 0.7604730176254005 3 [{I|L}A]P 3 6 34.705 0.0 0.0 3.7581 0.0 0.0 0.0 639.2747896783811 639.2747896783811 27.715299873086607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P 3.7581 - 8 + 1 1.19 32275.3 1.0 11005 5667 16669 HBL1_DMSO_200M_050219_1,16674 HBL1_DMSO_200M_050219_1,16674,ALWYLATS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16675 80.674 86.0 1149300.0 25 0 66500.0 + 27971 NVPEIMPKL 9 120 520.3144726798404 1038.614392426481 2 520.3154785037041 MULTI CID FTMS 0 0 0 16669 861678.75 0.5365108964924665 -13 0.94134521484375 6 Unmodified _PLVTPMVALV_ nc|ENSG00000103540|O43303|CCP110;ENSG00000103540|ENST00000694978|CCP110 32.30548876998284 0.2428506522065767 3 [{I|L}P]E{I|L}PMK 7 6 45.807 0.0 0.0 4.4104 0.0 0.0 0.0 227.1341427529057 227.1341427529057 12.264450537414284 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [{I|L}P]E{I|L}PMK 4.4104 - 1021 1 1.19 82558.2 1.0 11006 5667 16669 HBL1_DMSO_200M_050219_1,16675 HBL1_DMSO_200M_050219_1,16675,PLVTPMVALV False False NVPEIMPKL 80.67436 520.315478503704 4023477.5 16669.0 nc|ENSG00000103540|O43303|CCP110;;ENSG00000103540|ENST00000694978|CCP110 2.2099047899246216 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16676 80.676 76.0 356000.0 25 0 43882.0 -1 0 37 990.9279726689464 1979.8413924046924 2 991.4289428591728 MULTI CID FTMS 0 0 0 16669 859712.6875 1.0 0 0.0 7 3 [YQ]{I|L} 3 -1 14.705 0.0 0.0 0.74274 0.0 0.0 0.0 1572.6113563541644 1572.6113563541644 8.239087409443187 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 [YQ]{I|L} 0.74274 - 27 1 1.19 28005.8 1.0 11007 5667 16669 HBL1_DMSO_200M_050219_1,16676 HBL1_DMSO_200M_050219_1,16676, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16677 80.678 96.0 864110.0 25 0 70003.0 + 16886 KIFSGVFVKV 10 100 375.2340525282494 1122.6803281849482 3 375.5682861208916 MULTI CID FTMS 0 0 0 16669 588151.5 0.2329899267716686 6 -0.2277908325195312 8 Unmodified _KIFSGVFVKV_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 16.149105407346934 0.5765757077271437 3 {M(Oxidation (M))|F}VVK 4 6 23.06 0.0 0.0 2.054 0.0 0.0 631.367576945664 0.0 631.367576945664 0.0 12.346920206739432 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.3054621874040891 {M(Oxidation (M))|F}VVK 2.054 - 175 + 1 1.19 75602.9 1.0 11008 5667 16669 HBL1_DMSO_200M_050219_1,16677 HBL1_DMSO_200M_050219_1,16677,KIFSGVFVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16678 80.683 276.0 566420.0 25 0 57680.0 + 17167 KLIPGLNNL 9 155 491.3084308764768 980.6023088197536 2 491.3079406619072 MULTI CID FTMS 0 0 0 16669 523357.4375 0.9125427952688288 1 -0.0582504272460937 9 Unmodified _KLIPGLNNL_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 54.773552608820026 0.0299037012502309 3 [K{I|L}]{I|L}[PG]{I|L}NN{I|L} 9 0 + 32.628 0.0 0.0 3.3273 3.3273 76.06 0.0 0.0 0.0 4.936432193420792 -0.8036322872146116 -0.8036322872146116 5.96541562798317 0 1.0172203223519531 0.4814860601221125 0.0 0.7059771852360797 + + [K{I|L}]{I|L}[PG]{I|L}NN{I|L};{I|L}{I|L}K[PG]{I|L}NN{I|L};[K{I|L}]{I|L}[PG]{I|L}GGN{I|L};[VP]A[K{I|L}]{I|L}NN{I|L};{I|L}{I|L}K[PG]{I|L}GGN{I|L};[VP]{I|L}[KA]{I|L}NN{I|L};[VP]A[K{I|L}]{I|L}GGN{I|L};[{I|L}P]G[K{I|L}]{I|L}NN{I|L};[VP]{I|L}[KA]{I|L}GGN{I|L};[VP]{I|L}NK[{I|L}A]N{I|L} 3.3273;2.719;2.3883;1.8332;1.7799;1.5648;0.8942;0.65919;0.62575;0.59114 +;-;-;-;-;-;-;-;-;- + 1049 1 1.19 119012.8 1.0 11009 5667 16669 HBL1_DMSO_200M_050219_1,16678 HBL1_DMSO_200M_050219_1,16678,KLIPGLNNL True True KLIPGLNNL 80.68331 491.307940661907 4364155.0 16669.0 nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;;ENSG00000100991|ENST00000252015|TRPC4AP;;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP 3.648607174555461 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16679 80.688 245.0 266640.0 25 0 18254.0 9349 FILMTWTVLK 10 110 626.3613996006916 1250.708246268183 2 626.3629028201103 MULTI CID FTMS 0 0 0 16669 500378.3125 0.2372048025625296 4 -0.2084426879882812 10 Unmodified _FILMTWTVLK_ L1MC3_dup7320|chrX:70161794-70162664:+|1.112392509996284|0.2551508396873335|2.12|48.0|58|3|anti-sense 9.38312468134398 0.6832340498775793 3 V 1 9 10.485 0.0 0.0 0.83829 0.0 0.0 1133.628593413494 0.0 1133.628593413494 0.0 -4.208187539523749 -4.208187539523749 0.0 0 0.0 0.0 0.0 0.0 + V 0.83829 + + 168 + 1 1.19 53593.8 1.0 11010 5667 16669 HBL1_DMSO_200M_050219_1,16679 HBL1_DMSO_200M_050219_1,16679,FILMTWTVLK False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 16680 80.69 120.0 702300.0 25 0 88303.0 + 27189 PGGISLNLV 9 108 435.2589617538586 0 435.2599670290947 PEAK CID FTMS 0 0 0 16669 479979.03125 0.8623894734477996 -2 0.1496429443359375 11 Unmodified _PGGISLNLV_ REV__ENSG00000140943|ENST00000343411|MBTPS1 18.13498045792455 0.2189554373504223 3 {I|L}SV 3 -1 19.297 0.0 0.0 2.2218 0.0 0.0 344.207363349711 222.08930383853752 566.2966671882485 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 {I|L}SV 2.2218 - 63 + 1 1.19 70065.1 1.0 11011 5667 16669 HBL1_DMSO_200M_050219_1,16680 HBL1_DMSO_200M_050219_1,16680,PGGISLNLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16681 80.696 293.0 314300.0 25 0 15027.0 -1 0 97 1035.1630235864693 3102.467241359608 3 1035.830859363079 MULTI CID FTMS 0 0 0 16669 427486.46875 0.3398520831455558 -8 0.6019744873046875 12 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YASA{M(Oxidation (M))|F}S 8 -1 58.479 0.0 0.0 1.8849 0.0 0.0 0.0 2213.0588300649392 2213.0588300649392 42.281381439366186 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.5114393726401687 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YASA{M(Oxidation (M))|F}S 1.8849 - 2124 1 1.19 64405.6 1.0 11012 5667 16669 HBL1_DMSO_200M_050219_1,16681 HBL1_DMSO_200M_050219_1,16681, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16682 80.701 266.0 468290.0 25 0 39176.0 43443 WSVPPFLLFL 10 131 609.8495875822686 1217.684622231337 2 610.3519164919853 MULTI CID FTMS 0 0 0 16669 415374.375 0.1905077466196146 10 -0.3979263305664062 13 Unmodified _WSVPPFLLFL_ ENSG00000257138|ENST00000547270|TAS2R38 3.5964929083625545 0.7100006075494749 3 {M(Oxidation (M))|F} 1 9 10.969 0.0 0.0 0.90082 0.0 0.0 1052.6052745524291 0.0 1052.6052745524291 0.0 0.3731680914845192 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.90082 + + 82 + 1 1.19 95398.8 1.0 11013 5667 16669 HBL1_DMSO_200M_050219_1,16682 HBL1_DMSO_200M_050219_1,16682,WSVPPFLLFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16683 80.706 281.0 291020.0 25 0 44312.0 8754 EVRIKELKGWL 11 126 685.9084867260023 1369.8024205188044 2 685.9083740115166 MULTI CID FTMS 0 0 0 16669 382834.53125 0.3887649954690064 -2 0.1496429443359375 14 Unmodified _EVRIKELKGWL_ ENSG00000151320|ENST00000280979|AKAP6 3.2813086475875832 0.8596665074481906 3 AD{M(Oxidation (M))|F}D 4 11 20.433 0.0 0.0 1.4917 0.0 0.0 170.30647093572367 748.3232515924436 918.6297225281672 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AD{M(Oxidation (M))|F}D 1.4917 - 610 + 1 1.19 68084.8 1.0 11014 5667 16669 HBL1_DMSO_200M_050219_1,16683 HBL1_DMSO_200M_050219_1,16683,EVRIKELKGWL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16684 80.711 280.0 496120.0 25 0 43055.0 + 15928 KMDEVLYSI 9 175 549.2804049625709 1096.5462569919416 2 549.2806884646416 MULTI CID FTMS 0 0 0 16669 340036.625 0.1755483374813992 5 -0.2155990600585937 15 Unmodified _ISYFPSSPSI_ ENSG00000141759|ENST00000269601|TXNL4A 34.40172386719151 0.2166836008404837 3 [YV][QP]D{I|L}YS{I|L} 9 6 + 49.605 0.0 0.0 4.5237 4.5237 80.768 0.0 0.0 0.0 9.208187539523747 12.898540140654902 9.208187539523747 7.398320881344631 0 0.805462187404089 2.0 0.0 0.0 [YV][QP]D{I|L}YS{I|L};[YV]TTREES{I|L};[YV]T[SG]{I|L}V[MD]{I|L};{[TV]|[{I|L}S]}{[WT]|[RM]}D{I|L}YS{I|L};[YV]T[SG]V{I|L}[MD]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A][CS]{I|L}YS{I|L};{[TV]|[{I|L}S]}{[CA]|SS}{I|L}D{I|L}YS{I|L};{[TV]|[{I|L}S]}V{[MG]|[TS]}D{I|L}YS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YS{I|L};[Y{I|L}]YY{I|L}YS{I|L} 4.5237;3.849;3.7113;3.684;3.4368;3.352;3.33;3.33;3.2233;3.2089 -;-;-;-;-;-;-;-;-;- 3422 1 1.19 109930.4 1.0 11015 5667 16669 HBL1_DMSO_200M_050219_1,16684 HBL1_DMSO_200M_050219_1,16684,ISYFPSSPSI False False KMDEVLYSI 80.711082 549.280688464642 12268637.0 16669.0 ENSG00000141759|ENST00000269601|TXNL4A 0.0488432248433431 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16685 80.716 294.0 371600.0 25 0 21124.0 + 7922 ELQRALHKAK 10 156 597.3582759814785 1192.701999029757 2 597.3583862185478 MULTI CID FTMS 0 0 0 16669 293907.21875 0.2242228065002418 7 -0.2560272216796875 16 Unmodified _ELQRALHKAK_ REV__ENSG00000106554|ENST00000262570|CHCHD3;REV__ENST00000466644.5_1_7:132523157-132766697:-|nuORF 27.628801355627647 0.3479284626772844 3 {[QN]|[E{I|L}]|[KN]}GGQ{I|L} 6 -1 52.049 0.0 0.0 4.364 0.0 0.0 0.0 592.3541956452444 592.3541956452444 11.8753063169585 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 1.385151878060192 0.5796896906561032 {[QN]|[E{I|L}]|[KN]}GGQ{I|L} 4.364 - 2358 1 1.19 85005.3 1.0 11016 5667 16669 HBL1_DMSO_200M_050219_1,16685 HBL1_DMSO_200M_050219_1,16685,ELQRALHKAK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16686 80.722 296.0 214250.0 25 0 12166.0 24488 MIGICEAESWM 11 119 635.2666998449819 1268.5188467567637 2 635.2609741091728 MULTI CID FTMS 0 0 0 16669 359990.09375 0.6239131588639268 -9 0.6578445434570312 17 Unmodified _MIGICEAESWM_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 6.723162845929126 0.8434276150410019 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G 3 8 22.932 0.0 0.0 1.8078 0.0 0.0 0.0 964.3511581183448 964.3511581183448 1.0586121167619211 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G 1.8078 + + 262 1 1.19 52554.5 1.0 11017 5667 16669 HBL1_DMSO_200M_050219_1,16686 HBL1_DMSO_200M_050219_1,16686,MIGICEAESWM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16688 80.727 92.0 478850.0 25 0 98177.0 + 21084 LPAGINSIV 9 70 442.2659740038761 882.5173950745523 2 442.2665588259697 MULTI CID FTMS 0 0 0 16687 306896.625 0.3197951215077219 1 -0.034210205078125 1 Unmodified _LPAGINSIV_ ENSG00000047315|ENST00000314595|POLR2B 18.13498045792455 0.3457906370836843 3 [{I|L}A][PG]{I|L}[NS]{I|L}V 9 2 + 19.018 0.0 0.0 2.155 2.155 75.04 0.0 0.0 0.0 5.523102759226152 -14.80204688488094 -14.80204688488094 6.706962271689749 0 0.218765315847925 1.3979400086720375 0.5 0.0 [{I|L}A][PG]{I|L}[NS]{I|L}V;[{I|L}A][PG][WK]{I|L}V;[{I|L}P]Q{I|L}[NS]{I|L}V;[{I|L}P]Q[WK]{I|L}V;[{I|L}P][AG]{I|L}[NS]{I|L}V 2.155;1.395;1.2793;0.52711;0.22983 -;-;-;-;+ + 38 1 1.165 41992.8 1.0 11018 5668 16687 HBL1_DMSO_200M_050219_1,16688 HBL1_DMSO_200M_050219_1,16688,LPAGINSIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16689 80.728 38.0 1512900.0 25 0 130040.0 -1 TLDLEMMA 8 99 478.2091679885692 954.4037830439383 2 478.2086669802666 MULTI CID FTMS 0 0 0 16687 983140.1875 0.4734939302808567 -18 1.4027938842773438 2 2 Oxidation (M) _TLDLEM(Oxidation (M))M(Oxidation (M))A_ ENST00000559471.5_1_15:49282358-49282517:-|nuORF 9.347437153973935 0.7675937258251505 3 {[VA]|[{I|L}G]}D 3 -1 25.686 0.0 0.0 2.6914 0.0 0.0 0.0 666.2476605676289 666.2476605676289 5.007630161661538 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}D 2.6914 - 190 1 1.165 52987.4 1.0 11019 5668 16687 HBL1_DMSO_200M_050219_1,16689 HBL1_DMSO_200M_050219_1,16689,TLDLEMMA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16690 80.73 86.0 656270.0 25 0 39913.0 + 4092 DANPFLQSV 9 99 495.7485340024654 989.4825150717307 2 495.7480956912041 MULTI CID FTMS 0 0 0 16687 1041196.875 0.796565146765771 2 -0.0779800415039062 3 Unmodified _DANPFLQSV_ ENSG00000099917|ENST00000263205|MED15;ENST00000473244.5_1_22:20936789-20940988:+|nuORF;ENST00000489651.5_1_22:20929276-20940988:+|nuORF;ENST00000492381.5_1_22:20909161-20940988:+|nuORF;ENST00000493216.1_1_22:20939554-20940988:+|nuORF;nc|ENSG00000099917|Q96RN5-2|MED15;nc|ENSG00000099917|Q96RN5-3|MED15 26.268140514670165 0.1969607489560049 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QNWW 7 6 + 31.215 0.0 0.0 3.1547 3.1547 79.899 0.0 0.0 0.0 6.701425529741414 4.303556944260336 4.303556944260336 9.33053210369387 0 0.0 1.3010299956639813 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QNWW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[AG]NWW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QGGWW;{[DA]|[EG]}K{[RE]|[WV]}WW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N[Q{I|L}]WW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[AG]GGWW;[VS]Q{[RE]|[WV]}WW;[VS][W{I|L}]NWW;[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}NWW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GG[Q{I|L}]WW 3.1547;2.2117;2.2117;1.8643;1.6386;1.2756;1.2627;1.2383;0.87541;0.44296 -;-;-;-;-;-;-;-;-;- 240 1 1.165 51093.0 1.0 11020 5668 16687 HBL1_DMSO_200M_050219_1,16690 HBL1_DMSO_200M_050219_1,16690,DANPFLQSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16691 80.732 57.0 623920.0 25 0 81611.0 140 AALHICHAV 9 57 312.1694958394765 933.4866581186296 3 312.1694824099541 MULTI CID FTMS 0 0 0 16687 688504.5625 0.3417259016590347 -4 0.2542648315429687 4 Unmodified _AALHICHAV_ ENSG00000214160|ENST00000397676|ALG3;ENST00000485912.1_1_3:183960304-183960812:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3 5.230669730166228 0.7320841359114558 3 V 1 8 12.218 0.0 0.0 1.3089 0.0 0.0 816.407127334253 0.0 816.407127334253 0.0 5.764837301042718 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.3089 + + 14 + 1 1.165 35869.5 1.0 11021 5668 16687 HBL1_DMSO_200M_050219_1,16691 HBL1_DMSO_200M_050219_1,16691,AALHICHAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16692 80.737 319.0 463750.0 25 0 46475.0 + 18855 LASQHEEL 8 151 309.4904109860205 925.4494035582616 3 309.4903747439384 MULTI CID FTMS 0 0 0 16687 503819.90625 0.4001525382283764 -18 1.4027938842773438 5 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}{[HG]|PP}E{I|L} 8 -1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}{[HG]|PP}E + + 13.979 -19.322 -2.4324 1.5106 1.5106 48.533 0.0 0.0 0.0 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}{[HG]|PP}E{I|L} 1.5106 - 163 + 1 1.165 120499.8 1.0 11022 5668 16687 HBL1_DMSO_200M_050219_1,16692 HBL1_DMSO_200M_050219_1,16692,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16693 80.742 239.0 314770.0 25 0 26519.0 + 30829 RIKDEFQLL 9 110 581.3350933478131 1160.655633762426 2 581.3375732302666 MULTI CID FTMS 0 0 0 16687 459744.71875 0.2636329474724313 -5 0.3259429931640625 6 Unmodified _RIKDEFQLL_ ENSG00000104964|ENST00000327141|TLE5;ENST00000585782.1_1_19:3057505-3062198:-|nuORF;ENST00000586003.1_1_19:3061156-3062198:-|nuORF;nc|ENSG00000104964|Q08117-2|TLE5 43.77239144664712 0.0547478964384323 3 [Q{I|L}]{I|L}{[WT]|[RM]}{M(Oxidation (M))|F}Q{I|L}{I|L} 9 4 + 57.647 0.0 0.0 4.9668 4.9668 76.282 0.0 0.0 0.0 2.498774732165998 7.614393726401687 2.498774732165998 2.498774732165998 0 0.8807196863200843 1.2218487496163564 0.7742275032520141 0.3807196863200844 [Q{I|L}]{I|L}{[WT]|[RM]}{M(Oxidation (M))|F}Q{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}Q{I|L}{I|L};[AG]{I|L}{I|L}{[WT]|[RM]}{M(Oxidation (M))|F}Q{I|L}{I|L};[Q{I|L}]{I|L}{[WT]|[RM]}{M(Oxidation (M))|F}[AG]{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}[AG]{I|L}{I|L};[Q{I|L}]{I|L}{[WT]|[RM]}{I|L}{M(Oxidation (M))|F}Q{I|L};[Q{I|L}]{I|L}{[WT]|[RM]}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]{I|L}{I|L}{[WT]|[RM]}{M(Oxidation (M))|F}[AG]{I|L}{I|L};[R{I|L}]KDE{I|L}{M(Oxidation (M))|F}Q{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}{I|L}Q{I|L} 4.9668;4.7515;4.1887;4.1734;3.9581;3.5793;3.5375;3.3991;3.364;3.3222 -;+;-;-;-;-;-;-;-;- + 810 1 1.165 61800.1 1.0 11023 5668 16687 HBL1_DMSO_200M_050219_1,16693 HBL1_DMSO_200M_050219_1,16693,RIKDEFQLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16694 80.746 246.0 500110.0 25 0 62455.0 -1 0 88 700.4231854586791 699.415908992079 1 700.4225341677666 MULTI CID FTMS 0 0 0 16687 382774.84375 0.3081004895783372 -4 0.2542648315429687 7 3 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}Q{I|L} 6 -1 + 68.898 0.0 0.0 9.8508 9.8508 92.483 0.0 0.0 0.0 6.898480642347394 14.692737604564035 6.898480642347394 6.898480642347394 0 1.4361818737241734 1.3010299956639813 1.089136830878453 0.0 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}Q{I|L};[{I|L}V]D{I|L}Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}VQ{I|L};[{I|L}V]D{I|L}[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}VQ{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}VAAV{I|L};[{I|L}V]EVQ{I|L};[{I|L}V]DQ{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}V[AG]{I|L} 9.8508;8.8645;8.504;7.5237;7.5177;7.2719;6.6073;6.5374;6.2856;6.1769 -;-;-;-;-;-;-;-;-;- 458 1 1.165 95095.6 1.0 11024 5668 16687 HBL1_DMSO_200M_050219_1,16694 HBL1_DMSO_200M_050219_1,16694, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16695 80.751 249.0 253470.0 25 0 46179.0 + -1 MLKSSETLLY 10 97 600.8109659558507 1199.6073789785014 2 600.8123046755791 MULTI CID FTMS 0 0 0 16687 376620.8125 0.3095748995154734 -6 0.3716354370117187 8 Oxidation (M) _M(Oxidation (M))LKSSETLLY_ REV__ENSG00000114744|ENST00000473414|COMMD2;REV__ENST00000463077.5_1_3:149459310-149470177:-|nuORF;REV__ENST00000469896.1_1_3:149468461-149470237:-|nuORF;REV__nc|ENSG00000114744|Q86X83-2|COMMD2 13.90604991867851 0.6142120002215601 3 {NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}{[SA]|[TG]}SV{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 11 -1 + 41.571 0.0 0.0 3.4654 3.4654 67.89 0.0 0.0 0.0 0.051952079062616 0.051952079062616 0.051952079062616 0.051952079062616 0 0.0 2.0 1.1861818737241734 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}{[SA]|[TG]}SV{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}T{[SA]|[TG]}SV{I|L}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ST{[SA]|[TG]}SV{I|L}[Y{I|L}];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SV{I|L}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SV{I|L}[Y{I|L}];{NN|[MP]|[D{I|L}]|[EV]}[YG]{[SA]|[TG]}SV{I|L}[Y{I|L}];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}W{I|L}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}W{I|L}[Y{I|L}];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PA]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PA]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3.4654;3.4611;3.2761;3.2703;3.0853;3.0002;2.8108;2.6259;2.3462;2.1613 -;-;-;-;-;-;-;-;-;- 419 1 1.165 48707.3 1.0 11025 5668 16687 HBL1_DMSO_200M_050219_1,16695 HBL1_DMSO_200M_050219_1,16695,MLKSSETLLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16696 80.756 272.0 251600.0 25 0 11947.0 -1 EVKGECSSYYL 11 128 667.8001377727221 1333.585722612244 2 667.8005248904228 MULTI CID FTMS 0 0 0 16687 225036.96875 0.6675024216161101 -2 0.0901641845703125 9 Carbamidomethyl (C) _EVKGEC(Carbamidomethyl (C))SSYYL_ ENSG00000172167|ENST00000305949|MTBP 8.745405648335112 0.8338865417133445 3 {I|L}[DN]D{I|L}E 6 -1 27.061 0.0 0.0 2.0292 0.0 0.0 316.17341848498694 315.0816229720774 631.2550414570644 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 1.6549471895720984 0.0 {I|L}[DN]D{I|L}E 2.0292 - 969 + 1 1.165 57078.6 1.0 11026 5668 16687 HBL1_DMSO_200M_050219_1,16696 HBL1_DMSO_200M_050219_1,16696,EVKGECSSYYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16698 80.76 2.1 11252000.0 25 0 1391400.0 + 37304 TIRYPDPLI 9 45 544.3109498194198 1086.6073467056394 2 544.3114501833916 MULTI CID FTMS 0 0 0 16697 21032894.0 0.6695278704914632 6 -0.20220947265625 1 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 13.90604991867851 0.4602628045680013 3 {I|L} 1 8 13.099 0.0 0.0 1.2055 0.0 0.0 955.5123892855208 0.0 955.5123892855208 0.0 -10.088643834802156 -10.088643834802156 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2055 + + 8 + 1 1.165 27664.1 1.0 11027 5669 16697 HBL1_DMSO_200M_050219_1,16698 HBL1_DMSO_200M_050219_1,16698,TIRYPDPLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16699 80.761 5.7 8265100.0 25 0 873710.0 + 14627 IIIPEIQKV 9 81 526.8391643272683 1051.6637757213366 2 526.8394653201103 MULTI CID FTMS 0 0 0 16697 9008006.0 0.7219451793280817 3 -0.123138427734375 2 Unmodified _IIIPEIQKV_ ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;nc|ENSG00000124207|P55060-3|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L 27.628801355627647 0.1796483985696185 3 {I|L}{I|L}{I|L}PE{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 42.802 0.0 0.0 4.0699 4.0699 81.411 0.0 0.0 0.0 21.867355479190067 4.621892823592972 4.621892823592972 9.208187539523747 0 0.0 2.0 0.0 0.5 + + {I|L}{I|L}{I|L}PE{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}{I|L}PE{I|L}[AG]{[QV]|[N{I|L}]|[RA]|[KV]} 4.0699;3.1943 +;- + 165 + 1 1.165 43809.6 1.0 11028 5669 16697 HBL1_DMSO_200M_050219_1,16699 HBL1_DMSO_200M_050219_1,16699,IIIPEIQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16700 80.763 7.3 7937800.0 25 0 1522600.0 + 13212 HGMIMLRI 8 65 485.76934583357854 969.5241387339572 2 485.7698242068291 MULTI CID FTMS 0 0 0 16697 7430413.0 1.0 0 0.0 3 Unmodified _HGMIMLRI_ ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1 53.57557251787612 0.1224291679108181 3 HGM{I|L}{I|L}MR{I|L} 8 2 + 73.262 0.0 0.0 7.5565 7.5565 82.319 0.0 0.0 0.0 52.29277559936975 11.173362959118409 11.173362959118409 1.249387366082999 0 1.3494850021680094 1.5228787452803376 0.0 0.3494850021680094 HGM{I|L}{I|L}MR{I|L};HGM{I|L}M{I|L}R{I|L};{I|L}H{[MG]|[TS]}{I|L}MR{I|L};{I|L}H{[MG]|[TS]}M{I|L}R{I|L};H{I|L}{[MG]|[TS]}{I|L}MR{I|L};H{I|L}{[MG]|[TS]}M{I|L}R{I|L} 7.5565;7.4276;3.7189;3.59;3.4084;3.2795 -;+;-;-;-;- + 78 + 1 1.165 51625.0 1.0 11029 5669 16697 HBL1_DMSO_200M_050219_1,16700 HBL1_DMSO_200M_050219_1,16700,HGMIMLRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16701 80.764 10.0 4164800.0 25 0 937100.0 40226 VGRTRFLRA 9 60 538.327487619804 1074.6404223064078 2 538.3276855349541 MULTI CID FTMS 0 0 0 16697 6258869.5 0.7308982435071142 3 -0.123138427734375 4 Unmodified _VGRTRFLRA_ ENSG00000196878|ENST00000356082|LAMB3 0.6014990680409731 0.8936861360942873 3 V 1 8 9.6777 0.0 0.0 0.90055 0.0 0.0 957.5611814390236 0.0 957.5611814390236 0.0 9.67771005386541 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.90055 + + 1 + 1 1.165 39911.3 1.0 11030 5669 16697 HBL1_DMSO_200M_050219_1,16701 HBL1_DMSO_200M_050219_1,16701,VGRTRFLRA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16702 80.765 12.0 1881000.0 25 0 613450.0 45956 YYYEQDLWMEE 11 36 784.8142597270183 1567.6139665208366 2 784.8152953982353 MULTI CID FTMS 0 0 0 16697 4616818.5 0.5002609759427532 3 -0.123138427734375 5 Unmodified _YYYEQDLWMEE_ ENSG00000138709|ENST00000326639|LARP1B;nc|ENSG00000138709|Q659C4-2|LARP1B;nc|ENSG00000138709|Q659C4-4|LARP1B;nc|ENSG00000138709|Q659C4-9|LARP1B 1.4819007175156935 0.86815623132643 3 YY 2 9 16.454 0.0 0.0 1.0496 0.0 0.0 1223.4762844913428 0.0 1223.4762844913428 0.0 9.463950151760656 0.0 0.0 0 0.0 0.0 0.0 0.0 + YY 1.0496 + + 7 + 1 1.165 24772.9 1.0 11031 5669 16697 HBL1_DMSO_200M_050219_1,16702 HBL1_DMSO_200M_050219_1,16702,YYYEQDLWMEE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16703 80.766 11.0 2481800.0 25 0 250130.0 21807 LPNIHPELL 9 53 523.3041480219179 1044.5937431106356 2 523.3060790896416 MULTI CID FTMS 0 0 0 16697 3998797.0 0.9829215772992828 -2 0.0924606323242187 6 Unmodified _LPNIHPELL_ ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1 22.736283301280096 0.2418982879461534 3 {I|L}P 2 7 43.271 0.0 0.0 4.1424 0.0 0.0 0.0 831.4370855531741 831.4370855531741 9.04606501333376 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 4.1424 + + 93 + 1 1.165 29112.0 1.0 11032 5669 16697 HBL1_DMSO_200M_050219_1,16703 HBL1_DMSO_200M_050219_1,16703,LPNIHPELL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16704 80.768 75.0 611040.0 25 0 86383.0 -1 RVVGCCRV 8 66 316.8326148258719 947.4760150778156 3 316.8325683474541 MULTI CID FTMS 0 0 0 16697 927211.5 0.4652700500484013 -1 0.034210205078125 7 Carbamidomethyl (C) _RVVGC(Carbamidomethyl (C))CRV_ ENST00000421890.5_1_7:5862961-5870864:+|nuORF;ENST00000442665.1_1_7:5863000-5878792:+|nuORF 10.823927491677226 0.7510103885582552 3 [VG]VKV 5 -1 45.59 0.0 0.0 4.8118 0.0 0.0 0.0 462.1312044733032 462.1312044733032 32.09544243948811 0.0 0.0 0.0 0 0.2134679910804404 2.0 0.0 0.4247425010840047 [VG]VKV 4.8118 - 23 + 1 1.165 45113.7 1.0 11033 5669 16697 HBL1_DMSO_200M_050219_1,16704 HBL1_DMSO_200M_050219_1,16704,RVVGCCRV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16705 80.772 246.0 976770.0 25 0 172810.0 -1 ALLETYCA 8 133 314.1533594121321 939.4382488365964 3 314.1532165408134 MULTI CID FTMS 0 0 0 16697 778735.375 0.2814131651074368 -1 0.034210205078125 8 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 30.63653989081413 0.3996269429323407 3 A{I|L}{I|L}E 4 -1 62.211 0.0 0.0 6.6222 0.0 0.0 0.0 510.16761194400624 510.16761194400624 36.01342204748164 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.066901560044258 0.0 A{I|L}{I|L}E 6.6222 + + 98 + 1 1.165 195046.2 1.0 11034 5669 16697 HBL1_DMSO_200M_050219_1,16705 HBL1_DMSO_200M_050219_1,16705,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16706 80.774 27.0 2585300.0 25 0 492770.0 10848 GAAVLLPRLSL 11 80 555.3537982842387 0 555.3535034060478 PEAK CID FTMS 0 0 0 16697 635380.9375 1.0 0 0.0 9 Unmodified _GAAVLLPRLSL_ ENSG00000266714|ENST00000645453|MYO15B;nc|ENSG00000266714|Q96JP2-2|MYO15B 3.2813086475875832 0.4761840153648598 3 {M(Oxidation (M))|F} 1 11 5.4846 0.0 0.0 0.49469 0.0 0.0 432.3568142425023 526.2456759088499 958.6024901513522 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.49469 - 5 + 1 1.165 59140.1 1.0 11035 5669 16697 HBL1_DMSO_200M_050219_1,16706 HBL1_DMSO_200M_050219_1,16706,GAAVLLPRLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16707 80.778 243.0 124190.0 25 0 8546.8 19014 LDKLLFHIYLL 11 79 694.4218543465647 1386.829155759929 2 694.4232055544853 MULTI CID FTMS 0 0 0 16697 413428.0625 1.0 0 0.0 10 Unmodified _LDKLLFHIYLL_ chr11:113977576-113977771|33|20.18|0.11|7.5|+|ENST00000299961|HTR3A,HTR3A;ENSG00000166736|ENST00000504030|HTR3A;nc|ENSG00000166736|P46098-2|HTR3A;nc|ENSG00000166736|P46098-3|HTR3A;nc|ENSG00000166736|P46098-4|HTR3A;nc|ENSG00000166736|P46098-5|HTR3A 1.4819007175156935 0.86815623132643 3 {I|L} 1 10 11.99 0.0 0.0 0.86454 0.0 0.0 1255.7338779052402 0.0 1255.7338779052402 0.0 0.2069634257911268 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.86454 + + 39 + 1 1.165 28624.2 1.0 11036 5669 16697 HBL1_DMSO_200M_050219_1,16707 HBL1_DMSO_200M_050219_1,16707,LDKLLFHIYLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16708 80.78 93.0 559620.0 25 0 55320.0 + 20568 LLNLGPLFV 9 92 493.3076230802281 0 493.3085815310478 PEAK CID FTMS 0 0 0 16697 390546.96875 0.6092811473856957 -3 0.1243743896484375 11 Unmodified _LLNLGPLFV_ ENST00000605265.1_1_10:112660120-112660297:-|nuORF 23.1484247019978 0.1725298825155634 3 WP 2 8 10.969 0.0 0.0 1.1141 0.0 0.0 616.3859237954188 82.06704889468983 698.4529726901086 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WP 1.1141 - 95 + 1 1.165 45457.9 1.0 11037 5669 16697 HBL1_DMSO_200M_050219_1,16708 HBL1_DMSO_200M_050219_1,16708,LLNLGPLFV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16709 80.787 362.0 331010.0 25 0 59682.0 + -1 LAAMCDIF 8 133 319.4775756567915 0 319.4778320193291 PEAK CID FTMS 0 0 0 16697 316393.9375 0.5582466634297208 -14 1.0052337646484375 12 Carbamidomethyl (C),Oxidation (M) _LAAM(Oxidation (M))C(Carbamidomethyl (C))DIF_ REV__ENSG00000099194|ENST00000370355|SCD 10.823927491677226 0.5322985476678564 3 A 1 -1 6.9897 0.0 0.0 1.0974 0.0 0.0 480.8137653499127 82.0670641534789 562.8808295033916 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.0974 + + 7 + 1 1.165 99782.7 1.0 11038 5669 16697 HBL1_DMSO_200M_050219_1,16709 HBL1_DMSO_200M_050219_1,16709,LAAMCDIF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16710 80.794 383.0 518540.0 25 0 75872.0 + 30831 RIKDEFQLL 9 148 387.8923982767913 1160.655365430574 3 387.8922607302666 MULTI CID FTMS 0 0 0 16697 262245.84375 0.2237817116670945 -3 0.1243743896484375 13 Unmodified _RIKDEFQLL_ ENSG00000104964|ENST00000327141|TLE5;ENST00000585782.1_1_19:3057505-3062198:-|nuORF;ENST00000586003.1_1_19:3061156-3062198:-|nuORF;nc|ENSG00000104964|Q08117-2|TLE5 32.78568957990786 0.1150597335874693 3 [R{I|L}]KDEQ{M(Oxidation (M))|F}{I|L}{I|L} 9 2 + 51.159 0.0 0.0 4.4078 4.4078 77.877 0.0 0.0 0.0 14.546666312586568 33.367261009623434 14.546666312586568 4.771212547196626 0 0.5629529932484498 0.8239087409443188 0.8494850021680094 0.8494850021680094 [R{I|L}]KDEQ{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDQE{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}Q{I|L}{I|L};[R{I|L}]KDE[AG]{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KD[AG]E{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}[AG]{I|L}{I|L};[R{I|L}]KDEQ{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[R{I|L}]KDE{I|L}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[R{I|L}]KDQE{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[AG]K[KQ]EQ{M(Oxidation (M))|F}{I|L}{I|L} 4.4078;3.9967;3.9793;3.6144;3.2033;3.1859;3.0903;2.7536;2.6792;2.5587 -;-;+;-;-;-;-;-;-;- + 1900 1 1.165 158316.7 1.0 11039 5669 16697 HBL1_DMSO_200M_050219_1,16710 HBL1_DMSO_200M_050219_1,16710,RIKDEFQLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16711 80.8 352.0 387310.0 25 0 47857.0 + 4346 DASLVFKV 8 146 439.752570102468 877.4905872717361 2 439.7536193728447 MULTI CID FTMS 0 0 0 16697 268657.125 0.0122695215630037 15 -0.8297348022460938 14 Unmodified _DASLVFKV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602816-23603164:-|nuORF 54.773552608820026 0.1167943196628344 3 {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV 8 0 + 67.058 0.0 0.0 7.642 7.642 88.337 0.0 0.0 0.0 21.78273661756907 5.149098156090631 5.149098156090631 5.149098156090631 0 1.048455006504028 2.0 0.0 0.1861818737241735 + + {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV;{[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}VK;{[DA]|[EG]}S{I|L}VV{M(Oxidation (M))|F}K 7.642;7.0552;6.223 +;-;- + 348 + 1 1.165 109149.8 1.0 11040 5669 16697 HBL1_DMSO_200M_050219_1,16711 HBL1_DMSO_200M_050219_1,16711,DASLVFKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16713 80.804 23.0 2832100.0 25 0 200940.0 + 40251 VGSTSASRGL 10 89 467.7499827380652 933.4854125429304 2 467.7502624392509 MULTI CID FTMS 0 0 0 16712 2531040.75 0.8738329481677121 1 -0.0722122192382812 1 Unmodified _VGSTSASRGL_ REV__ENSG00000144460|ENST00000272907|NYAP2;REV__ENSG00000166924|ENST00000300179|NYAP1;REV__nc|ENSG00000144460|Q9P242-3|NYAP2;REV__nc|ENSG00000144460|Q9P242|NYAP2;REV__nc|ENSG00000166924|Q6ZVC0-2|NYAP1 22.736283301280096 0.4578556481593033 3 [VG]{I|L}[HD]{I|L}H 7 -1 31.005 0.0 0.0 3.3214 0.0 0.0 0.0 159.07546585520723 159.07546585520723 9.009782128541133 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.0 0.0 [VG]{I|L}[HD]{I|L}H 3.3214 - 205 1 1.137 56882.1 1.0 11041 5670 16712 HBL1_DMSO_200M_050219_1,16713 HBL1_DMSO_200M_050219_1,16713,VGSTSASRGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16714 80.805 30.0 1945500.0 25 0 199320.0 + 21367 LPFQKGYLV 9 98 532.8108539223938 1063.6071549115877 2 532.8109008669853 MULTI CID FTMS 0 0 0 16712 2252324.5 0.7949245451062626 -2 0.0779800415039062 2 Unmodified _LPFQKGYLV_ ENSG00000075089|ENST00000188312|ACTR6;ENST00000550813.5_1_12:100594629-100599999:+|nuORF;nc|ENSG00000075089|Q9GZN1-2|ACTR6 42.09456458481378 0.0639583784996157 3 {I|L}P{M(Oxidation (M))|F}Q 4 5 50.266 0.0 0.0 4.726 0.0 0.0 0.0 575.3216759854381 575.3216759854381 28.210382931319984 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3807196863200844 + {I|L}P{M(Oxidation (M))|F}Q 4.726 + + 481 + 1 1.137 53490.8 1.0 11042 5670 16712 HBL1_DMSO_200M_050219_1,16714 HBL1_DMSO_200M_050219_1,16714,LPFQKGYLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16715 80.806 5.3 8019300.0 25 0 558270.0 + 4262 DAPVALVVHM 10 71 526.2840515947472 1050.5535502562943 2 526.2845336794853 MULTI CID FTMS 0 0 0 16712 7322873.5 0.7731804789409472 -1 0.0437698364257812 3 Unmodified _DAPVALVVHM_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 38.15118350030904 0.1770901513673823 3 {[DA]|[EG]}PVA{I|L}VV[HM] 10 0 + 56.898 0.0 0.0 5.416 5.416 88.757 0.0 0.0 0.0 28.437492820425803 7.269987279362624 7.269987279362624 20.72341821517319 0 0.3252574989159953 1.3010299956639813 0.0 0.0 + + {[DA]|[EG]}PVA{I|L}VV[HM];{I|L}{I|L}G[WQ]AV[HQ];[VP]A{[CP]|[EA]}K[TA][HQ];[VP][RD]K[TA][HQ];{I|L}{I|L}GVH[{M(Oxidation (M))|F}T][HQ];[VP]A{I|L}{[QS]|[NT]}[TA][HQ];{I|L}{I|L}GP{[QS]|[NT]}[TA][HQ];[Q{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}AV[HQ];[EP]{I|L}QK[TA][HQ];[Q{I|L}][EP]K[TA][HQ] 5.416;3.4434;2.5116;2.344;2.0373;1.9386;1.7072;1.4844;0.98668;0.15373 +;-;-;-;-;-;-;-;-;- + 245 + 1 1.137 40701.1 1.0 11043 5670 16712 HBL1_DMSO_200M_050219_1,16715 HBL1_DMSO_200M_050219_1,16715,DAPVALVVHM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16716 80.807 6.8 3797500.0 25 0 258690.0 + 16923 KILDLETQL 9 65 536.8165124680247 1071.618472002849 2 536.8163940310478 MULTI CID FTMS 0 0 0 16712 5934720.0 0.65983856262925 -2 0.0779800415039062 4 Unmodified _KILDLETQL_ ENSG00000136811|ENST00000351030|ODF2;ENST00000488909.1_1_9:131260677-131262531:+|nuORF;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2 26.268140514670165 0.1969607489560049 3 {[QN]|[E{I|L}]|[KN]}VK{I|L}ET[Q{I|L}] 9 3 + 41.348 0.0 0.0 3.8585 3.8585 81.981 0.0 0.0 0.0 7.147642715192504 30.890625187447966 7.147642715192504 10.41392685158225 0 0.3494850021680094 0.0 0.5 0.0 {[QN]|[E{I|L}]|[KN]}VK{I|L}ET[Q{I|L}];{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}ET[Q{I|L}];{[QN]|[E{I|L}]|[KN]}VE[K{I|L}]T[Q{I|L}];{[QN]|[E{I|L}]|[KN]}VK{I|L}[DP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}E[K{I|L}]T[Q{I|L}];[VP]HH[K{I|L}]T[Q{I|L}] 3.8585;2.8867;2.1087;1.8778;1.1369;0.54947 -;-;-;-;-;- 98 1 1.137 29691.1 1.0 11044 5670 16712 HBL1_DMSO_200M_050219_1,16716 HBL1_DMSO_200M_050219_1,16716,KILDLETQL False True KILDLETQL 80.807471 536.816394031048 130736728.0 16712.0 ENST00000488909.1_1_9:131260677-131262531:+|nuORF;;nc|ENSG00000136811|Q5BJF6-4|ODF2;;nc|ENSG00000136811|Q5BJF6|ODF2;;ENSG00000136811|ENST00000351030|ODF2;;nc|ENSG00000136811|Q5BJF6-3|ODF2;;nc|ENSG00000136811|Q5BJF6-2|ODF2 5.82249641418457 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16717 80.809 21.0 4506300.0 25 0 821100.0 -1 LASTECFL 8 76 470.7261422116269 939.4377314900538 2 470.7262145876884 MULTI CID FTMS 0 0 0 16712 2914426.5 1.0 0 0.0 5 Carbamidomethyl (C) _LASTEC(Carbamidomethyl (C))FL_ ENSG00000196248|ENST00000641123|OR10S1;nc|ENSG00000196248|Q8NGN2|OR10S1 19.438996006549623 0.6237395211498085 3 {I|L}A 2 -1 39.706 0.0 0.0 4.2266 0.0 0.0 0.0 752.2940133341671 752.2940133341671 21.94201534099189 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {I|L}A 4.2266 + + 52 + 1 1.137 78042.4 1.0 11045 5670 16712 HBL1_DMSO_200M_050219_1,16717 HBL1_DMSO_200M_050219_1,16717,LASTECFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16718 80.811 137.0 522400.0 25 0 167300.0 + 43295 WKIRLHGFPSL 11 76 677.3950112965572 1352.7754696599145 2 677.3967773318291 MULTI CID FTMS 0 0 0 16712 1703135.0 0.8493629254418329 -2 0.0779800415039062 6 Unmodified _WKIRLHGFPSL_ REV__ENST00000590121.1_1_19:12918336-12918396:+|nuORF 1.1933415558491238 0.8695176722560516 3 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.40543 0.0 0.0 890.5284431479987 312.15763597078995 1202.6860791187887 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.40543 + + 18 + 1 1.137 74121.6 1.0 11046 5670 16712 HBL1_DMSO_200M_050219_1,16718 HBL1_DMSO_200M_050219_1,16718,WKIRLHGFPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16719 80.815 167.0 770830.0 25 0 98246.0 -1 0 96 336.1043917088872 670.1942304845744 2 336.1048461794853 MULTI CID FTMS 0 0 0 16712 1391435.875 0.1497786505371182 7 -0.2616958618164062 7 3 {[CP]|[EA]}S 3 -1 9.437 0.0 0.0 1.4081 0.0 0.0 0.0 380.0751131647094 380.0751131647094 5.45757490560675 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[CP]|[EA]}S 1.4081 - 8 + 1 1.137 108162.5 1.0 11047 5670 16712 HBL1_DMSO_200M_050219_1,16719 HBL1_DMSO_200M_050219_1,16719, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16720 80.816 41.0 1752000.0 25 0 128970.0 + -1 GSGCWARGL 9 100 482.2279910030984 962.4414290729968 2 482.7300598025322 MULTI CID FTMS 0 0 0 16712 885798.625 0.7467501921569611 -3 0.13623046875 8 Carbamidomethyl (C) _GSGC(Carbamidomethyl (C))WARGL_ REV__ENST00000532982.5_1_11:58938931-58949400:+|nuORF 7.910154910731844 0.6385446671287552 3 [VG]{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}[Q{I|L}]K 8 -1 17.369 0.0 0.0 1.8047 0.0 0.0 0.0 55.989386386554685 55.989386386554685 1.1709124234504067 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VG]{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}[Q{I|L}]K 1.8047 - 193 1 1.137 59224.4 1.0 11048 5670 16712 HBL1_DMSO_200M_050219_1,16720 HBL1_DMSO_200M_050219_1,16720,GSGCWARGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16721 80.817 64.0 775670.0 25 0 77650.0 + 34901 SQIEADFRL 9 74 539.7800980862982 1077.5456432393962 2 539.7810546755791 MULTI CID FTMS 0 0 0 16712 698024.3125 0.0271767661109587 13 -0.689910888671875 9 Unmodified _SQIEADFRL_ ENSG00000198900|ENST00000361337|TOP1 28.49450938151212 0.1686335738423394 3 {[QS]|[NT]}{I|L}EAD 6 3 47.893 0.0 0.0 4.4446 0.0 0.0 0.0 431.2421773036325 431.2421773036325 37.80394370788876 0.0 0.0 0.0 0 1.0 1.0 0.4247425010840047 0.0 + {[QS]|[NT]}{I|L}EAD 4.4446 + + 44 + 1 1.137 43494.9 1.0 11049 5670 16712 HBL1_DMSO_200M_050219_1,16721 HBL1_DMSO_200M_050219_1,16721,SQIEADFRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16722 80.823 322.0 876070.0 25 0 165900.0 + 6558 EALPVKLI 8 174 441.786492076808 881.5584312204161 2 441.7865783572197 MULTI CID FTMS 0 0 0 16712 369667.0 0.069513887752786 -7 0.4039230346679687 10 Unmodified _EALPVKLI_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;nc|ENSG00000171848|P31350-2|RRM2 38.15118350030904 0.2652218139009398 3 {[CP]|[EA]}{I|L}PVK{I|L}{I|L} 8 0 + 24.473 0.0 0.0 2.7761 2.7761 81.743 0.0 0.0 0.0 -1.945830421822663 2.0774392864352365 -1.945830421822663 24.47321445220311 0 0.5 0.0 0.0 0.0 + + {[CP]|[EA]}{I|L}PVK{I|L}{I|L} 2.7761 + + 990 + 1 1.137 217874.3 1.0 11050 5670 16712 HBL1_DMSO_200M_050219_1,16722 HBL1_DMSO_200M_050219_1,16722,EALPVKLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16723 80.828 269.0 924080.0 25 0 147640.0 -1 0 123 930.0118021451276 0 930.0131713747978 PEAK CID FTMS 0 0 0 16712 313115.5625 0.9758396442616416 -3 0.13623046875 11 3 PH{M(Oxidation (M))|F}[{M(Oxidation (M))|F}T]AQ{I|L}R{I|L} 10 -1 43.849 0.0 0.0 2.36 0.0 0.0 436.3022536600634 208.0734957330688 644.3757493931322 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.3494850021680094 PH{M(Oxidation (M))|F}[{M(Oxidation (M))|F}T]AQ{I|L}R{I|L} 2.36 - 2633 + 1 1.137 165549.4 1.0 11051 5670 16712 HBL1_DMSO_200M_050219_1,16723 HBL1_DMSO_200M_050219_1,16723, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16724 80.834 318.0 152990.0 25 0 24525.0 -1 0 45 1142.4826224881576 3424.426038064673 3 1143.483325183392 MULTI CID FTMS 0 0 0 16712 300250.59375 0.1328087756459486 7 -0.2616958618164062 12 3 E 1 -1 3.9794 0.0 0.0 0.11621 0.0 0.0 2768.1972915820547 524.1632784479124 3292.360570029967 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.11621 - 28 + 1 1.137 44062.2 1.0 11052 5670 16712 HBL1_DMSO_200M_050219_1,16724 HBL1_DMSO_200M_050219_1,16724, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16725 80.841 365.0 430580.0 25 0 43076.0 + 40321 VGYYAAHPS 9 185 322.1566826467924 0 322.1566650271416 PEAK CID FTMS 0 0 0 16712 313821.125 0.8875410670898795 -3 0.13623046875 13 Unmodified _VGYYAAHPS_ REV__ENSG00000147324|ENST00000276282|MFHAS1 8.745405648335112 0.3266626568796316 3 G 1 -1 6.9897 0.0 0.0 1.0882 0.0 0.0 514.2032140711254 68.05150018863515 582.2547142597606 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 1.0882 + + 12 + 1 1.137 125876.7 1.0 11053 5670 16712 HBL1_DMSO_200M_050219_1,16725 HBL1_DMSO_200M_050219_1,16725,VGYYAAHPS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16726 80.848 386.0 148570.0 25 0 6977.4 + 9230 FGREDVVS 8 105 303.4864385595946 0 303.4863464236259 PEAK CID FTMS 0 0 0 16712 259278.5 1.0 0 0.0 14 Unmodified _FGREDVVS_ REV__ENSG00000181027|ENST00000318584|FKRP 3.5964929083625545 0.5870767149301087 3 A 1 -1 3.9794 0.0 0.0 0.6578 0.0 0.0 448.83118597973765 82.06708704166249 530.8982730214002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.6578 - 7 + 1 1.137 48093.6 1.0 11054 5670 16712 HBL1_DMSO_200M_050219_1,16726 HBL1_DMSO_200M_050219_1,16726,FGREDVVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16727 80.853 310.0 161870.0 25 0 17750.0 -1 0 58 1016.1426258711776 3045.4060482137324 3 1016.81114500761 MULTI CID FTMS 0 0 0 16712 80154.84375 0.1441694977406304 8 -0.2995681762695312 15 3 [NP]{I|L}Q 4 -1 13.188 0.0 0.0 0.43303 0.0 0.0 0.0 2590.144365434689 2590.144365434689 7.703037561203843 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}Q 0.43303 - 153 1 1.137 42961.3 1.0 11055 5670 16712 HBL1_DMSO_200M_050219_1,16727 HBL1_DMSO_200M_050219_1,16727, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16728 80.859 313.0 77344.0 25 0 7474.8 + -1 RCKRRCFRNWR 11 54 819.4283935427666 0 819.4283935427666 PEAK CID FTMS 0 0 0 -1 0 16 Carbamidomethyl (C) _RC(Carbamidomethyl (C))KRRCFRNWR_ REV__ENSG00000151067|ENST00000399655|CACNA1C;REV__nc|ENSG00000151067|Q13936-10|CACNA1C;REV__nc|ENSG00000151067|Q13936-11|CACNA1C;REV__nc|ENSG00000151067|Q13936-13|CACNA1C;REV__nc|ENSG00000151067|Q13936-14|CACNA1C;REV__nc|ENSG00000151067|Q13936-15|CACNA1C;REV__nc|ENSG00000151067|Q13936-16|CACNA1C;REV__nc|ENSG00000151067|Q13936-17|CACNA1C;REV__nc|ENSG00000151067|Q13936-18|CACNA1C;REV__nc|ENSG00000151067|Q13936-19|CACNA1C;REV__nc|ENSG00000151067|Q13936-2|CACNA1C;REV__nc|ENSG00000151067|Q13936-20|CACNA1C;REV__nc|ENSG00000151067|Q13936-21|CACNA1C;REV__nc|ENSG00000151067|Q13936-22|CACNA1C;REV__nc|ENSG00000151067|Q13936-23|CACNA1C;REV__nc|ENSG00000151067|Q13936-24|CACNA1C;REV__nc|ENSG00000151067|Q13936-25|CACNA1C;REV__nc|ENSG00000151067|Q13936-26|CACNA1C;REV__nc|ENSG00000151067|Q13936-27|CACNA1C;REV__nc|ENSG00000151067|Q13936-28|CACNA1C;REV__nc|ENSG00000151067|Q13936-29|CACNA1C;REV__nc|ENSG00000151067|Q13936-3|CACNA1C;REV__nc|ENSG00000151067|Q13936-30|CACNA1C;REV__nc|ENSG00000151067|Q13936-31|CACNA1C;REV__nc|ENSG00000151067|Q13936-32|CACNA1C;REV__nc|ENSG00000151067|Q13936-33|CACNA1C;REV__nc|ENSG00000151067|Q13936-34|CACNA1C;REV__nc|ENSG00000151067|Q13936-35|CACNA1C;REV__nc|ENSG00000151067|Q13936-36|CACNA1C;REV__nc|ENSG00000151067|Q13936-37|CACNA1C;REV__nc|ENSG00000151067|Q13936-4|CACNA1C;REV__nc|ENSG00000151067|Q13936-5|CACNA1C;REV__nc|ENSG00000151067|Q13936-6|CACNA1C;REV__nc|ENSG00000151067|Q13936-7|CACNA1C;REV__nc|ENSG00000151067|Q13936-8|CACNA1C;REV__nc|ENSG00000151067|Q13936-9|CACNA1C;REV__nc|ENSG00000151067|Q13936|CACNA1C 0.3070304955306653 0.4761840153648598 3 M 1 -1 6.9897 0.0 0.0 0.42702 0.0 0.0 1220.6326527087767 282.14716516666255 1502.7798178754392 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.42702 - 4 + 1 1.137 23575.1 1.0 11056 5670 16712 HBL1_DMSO_200M_050219_1,16728 HBL1_DMSO_200M_050219_1,16728,RCKRRCFRNWR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16729 80.866 310.0 200720.0 25 0 40310.0 -1 0 69 975.960986316204 0 975.960986316204 PEAK CID FTMS 0 0 0 -1 0 17 3 {I|L}Q{I|L} 3 -1 9.2968 0.0 0.0 0.47678 0.0 0.0 1384.582664915808 208.0734346979125 1592.6560996137205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Q{I|L} 0.47678 - 412 + 1 1.137 45332.9 1.0 11057 5670 16712 HBL1_DMSO_200M_050219_1,16729 HBL1_DMSO_200M_050219_1,16729, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16730 80.872 344.0 96015.0 25 0 9363.9 -1 WTCWECDCLFM 11 62 804.2906982302666 0 804.2906982302666 PEAK CID FTMS 0 0 0 -1 0 18 3 Carbamidomethyl (C) _WTC(Carbamidomethyl (C))WEC(Carbamidomethyl (C))DC(Carbamidomethyl (C))LFM_ ENSG00000074657|ENST00000591808|ZNF532;ENST00000592249.5_1_18:56620439-56651695:+|nuORF 0.0 0.4761840153648598 3 Y 1 -1 6.9897 0.0 0.0 0.43507 0.0 0.0 1308.434260959066 132.04602991275627 1440.4802908718225 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.43507 - 10 + 1 1.137 29970.0 1.0 11058 5670 16712 HBL1_DMSO_200M_050219_1,16730 HBL1_DMSO_200M_050219_1,16730,WTCWECDCLFM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16732 80.876 21.0 2748900.0 25 0 512270.0 + 39470 VAQCETGKL 9 56 474.7452695489239 947.4759861646478 2 474.7450439333916 MULTI CID FTMS 0 0 0 16731 2661322.25 0.6602858547659901 1 -0.0071563720703125 1 Unmodified _VAQCETGKL_ REV__L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|96|3|sense 14.838274106304384 0.4350285940865338 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A 3 -1 25.686 0.0 0.0 2.711 0.0 0.0 0.0 629.2933133953696 629.2933133953696 4.71726222832956 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A 2.711 - 15 1 1.137 51777.9 1.0 11059 5671 16731 HBL1_DMSO_200M_050219_1,16732 HBL1_DMSO_200M_050219_1,16732,VAQCETGKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16733 80.879 156.0 559280.0 25 0 80026.0 23016 LSIEQQRQKLP 11 96 670.3877724846369 1338.7609920360735 2 670.3878051638603 MULTI CID FTMS 0 0 0 16731 1421220.625 0.7990218842351481 2 -0.01934814453125 2 Unmodified _LSIEQQRQKLP_ ENSG00000101452|ENST00000252011|DHX35;nc|ENSG00000101452|Q9H5Z1-2|DHX35 2.9952420565917617 0.861016188266951 3 {[TV]|[{I|L}S]}{I|L}G 4 8 2.5976 0.0 0.0 0.19403 0.0 0.0 0.0 965.5176808390612 965.5176808390612 0.607887415777534 0.0 0.0 0.0 0 0.0 0.5686362358410126 0.0 0.0 {[TV]|[{I|L}S]}{I|L}G 0.19403 - 29 1 1.137 74427.3 1.0 11060 5671 16731 HBL1_DMSO_200M_050219_1,16733 HBL1_DMSO_200M_050219_1,16733,LSIEQQRQKLP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16735 80.883 19.0 2714600.0 25 0 295860.0 + 40143 VGLVDVPHP 9 80 466.7622093520663 931.5098657709326 2 466.7623474001884 MULTI CID FTMS 0 0 0 16734 2110472.25 0.8159175999374474 1 -0.0121917724609375 1 Unmodified _VGLVDVPHP_ REV__ENSG00000214756|ENST00000532971|CSKMT;REV__ENST00000398922.6_1_11:62433857-62434520:+|nuORF 16.942295170755138 0.3780752226737986 3 [VG]{I|L}V 4 -1 34.909 0.0 0.0 3.7476 0.0 0.0 0.0 560.2468966119749 560.2468966119749 21.414412723804546 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.0 0.0 [VG]{I|L}V 3.7476 + + 132 + 1 1.137 44744.8 1.0 11061 5672 16734 HBL1_DMSO_200M_050219_1,16735 HBL1_DMSO_200M_050219_1,16735,VGLVDVPHP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16736 80.884 32.0 1920600.0 25 0 176470.0 + 25366 NAYEYFTKI 9 93 574.7844821998283 1147.5544114664565 2 574.7844726443291 MULTI CID FTMS 0 0 0 16734 1885105.375 0.1465907445522614 -6 0.2475128173828125 2 Unmodified _NAYEYFTKI_ ENSG00000030110|ENST00000374467|BAK1;nc|ENSG00000030110|Q16611-2|BAK1 34.93206674587334 0.1032771302489716 3 {[QG]|[NA]}YEY{M(Oxidation (M))|F}TK{I|L} 9 0 + 75.315 0.0 0.0 6.5631 6.5631 93.613 0.0 0.0 0.0 49.6289755094822 9.341605587590536 9.341605587590536 46.6410185620547 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + + {[QG]|[NA]}YEY{M(Oxidation (M))|F}TK{I|L};{[QG]|[NA]}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[R{M(Oxidation (M))|F}]{[MS]|[{M(Oxidation (M))|F}A]} 6.5631;2.4987 +;- + 376 + 1 1.137 51335.1 1.0 11062 5672 16734 HBL1_DMSO_200M_050219_1,16736 HBL1_DMSO_200M_050219_1,16736,NAYEYFTKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16737 80.886 17.0 730230.0 25 0 69199.0 -1 LVFYNKCS 8 36 515.7547642828263 1029.4949756324525 2 515.7556030154228 MULTI CID FTMS 0 0 0 16734 1814267.75 0.9291690017298994 3 -0.079071044921875 3 Carbamidomethyl (C) _LVFYNKC(Carbamidomethyl (C))S_ ENSG00000074657|ENST00000591808|ZNF532 0.7936320650641473 0.8195151834710337 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.137 20382.3 1.0 11063 5672 16734 HBL1_DMSO_200M_050219_1,16737 HBL1_DMSO_200M_050219_1,16737,LVFYNKCS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16738 80.888 88.0 410250.0 25 0 37513.0 + 2861 AVDLTLPKV 9 68 478.2948132439346 954.5750735546692 2 478.2950622439384 MULTI CID FTMS 0 0 0 16734 1423179.5 0.4415434729343246 -9 0.4832916259765625 4 Unmodified _AVDLTLPKV_ ENSG00000196419|ENST00000360079|XRCC6;ENST00000478914.1_1_22:42052971-42057696:+|nuORF;ENST00000518193.1_1_8:63767865-63768189:-|nuORF;nc|ENSG00000196419|P12956-2|XRCC6 19.256988751693697 0.3154191944385105 3 {[VA]|[{I|L}G]}D 3 6 28.684 0.0 0.0 3.0049 0.0 0.0 0.0 666.4192562541411 666.4192562541411 17.090606190045108 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[VA]|[{I|L}G]}D 3.0049 + + 33 1 1.137 33327.2 1.0 11064 5672 16734 HBL1_DMSO_200M_050219_1,16738 HBL1_DMSO_200M_050219_1,16738,AVDLTLPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16739 80.891 200.0 389350.0 25 0 53773.0 + 37662 TLMDMRLSQV 10 124 597.3041592192274 1192.5937655052546 2 597.3045532107353 MULTI CID FTMS 0 0 0 16734 721919.1875 0.6245884052124795 -4 0.1573486328125 5 Unmodified _TLMDMRLSQV_ ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6 28.49450938151212 0.328477364964909 3 [{I|L}T]MDV 5 5 43.456 0.0 0.0 3.6438 0.0 0.0 0.0 630.3035982721311 630.3035982721311 17.785327584667208 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]MDV 3.6438 - 1054 + 1 1.137 62046.7 1.0 11065 5672 16734 HBL1_DMSO_200M_050219_1,16739 HBL1_DMSO_200M_050219_1,16739,TLMDMRLSQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16741 80.895 1.0 42927000.0 25 0 6002400.0 + 12678 GVLPNIQAV 9 71 455.7712203434208 909.5278877536416 2 455.7715637087822 MULTI CID FTMS 0 0 0 16740 55383828.0 0.8404669140242653 1 -0.0282363891601562 1 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 24.67388899826682 0.2172451872415813 3 [NP]{I|L}QA 5 4 35.326 0.0 0.0 3.884 0.0 0.0 0.0 383.2275697206916 383.2275697206916 14.155566560484836 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.4247425010840047 + [NP]{I|L}QA 3.884 + + 152 1 1.094 40387.8 1.0 11066 5673 16740 HBL1_DMSO_200M_050219_1,16741 HBL1_DMSO_200M_050219_1,16741,GVLPNIQAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16742 80.897 2.1 20348000.0 25 0 2965200.0 + -1 AIMPSALAL 9 61 451.7527689299804 901.4909849267608 2 451.7531005740166 MULTI CID FTMS 0 0 0 16740 25881652.0 0.3303526061778427 -13 0.6871719360351562 2 Oxidation (M) _AIM(Oxidation (M))PSALAL_ REV__ENSG00000196531|ENST00000454682|NACA;REV__nc|ENSG00000196531|E9PAV3-2|NACA 30.22481116460888 0.1466181017706357 3 [{I|L}A][WE]S{I|L}[{I|L}A] 8 -1 + 41.132 0.0 0.0 4.5626 4.5626 73.106 0.0 0.0 0.0 6.800150061873104 6.989700043360188 6.800150061873104 1.3033376849500584 0 0.4247425010840047 2.0 0.5 0.0 [{I|L}A][WE]S{I|L}[{I|L}A];[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}[{I|L}A];[{I|L}A]{[ES]|[DT]|[{I|L}C]}W{I|L}[{I|L}A];[{I|L}A]{[WT]|[RM]}D{I|L}[{I|L}A];[PS]P{M(Oxidation (M))|F}AS{I|L}[{I|L}A];[{I|L}A]{[ES]|[DT]|[{I|L}C]}[RP]{[ET]|[MV]} 4.5626;4.4181;4.2287;4.0334;3.8083;1.928 -;-;-;-;-;- 82 1 1.094 41310.1 1.0 11067 5673 16740 HBL1_DMSO_200M_050219_1,16742 HBL1_DMSO_200M_050219_1,16742,AIMPSALAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16743 80.898 5.7 6829500.0 25 0 671580.0 23709 LTTRPSESKT 10 67 560.3015923871525 1118.5886318411049 2 560.3021728396416 MULTI CID FTMS 0 0 0 16740 9674586.0 0.0415010414697695 16 -1.0942459106445312 3 Unmodified _LTTRPSESKT_ ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1 13.042465956692816 0.6287021003332052 3 [{I|L}T]C(Carbamidomethyl (C))PV{I|L}T 7 6 35.077 0.0 0.0 3.1358 0.0 0.0 0.0 331.14701742143615 331.14701742143615 19.619318874934507 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.8252574989159953 0.0 [{I|L}T]C(Carbamidomethyl (C))PV{I|L}T 3.1358 - 213 1 1.094 36740.0 1.0 11068 5673 16740 HBL1_DMSO_200M_050219_1,16743 HBL1_DMSO_200M_050219_1,16743,LTTRPSESKT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16744 80.899 23.0 3090900.0 25 0 508100.0 + 4632 DAYVLPKL 8 67 459.7681889261383 917.5218249190766 2 459.7681762576103 MULTI CID FTMS 0 0 0 16740 2458313.25 0.0540152531678611 13 -0.8696212768554688 4 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 32.30548876998284 0.3644845974844379 3 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 + 64.206 0.0 0.0 6.9977 6.9977 91.74 0.0 0.0 0.0 49.76866683161987 8.002669794978274 8.002669794978274 9.921746624880434 0 1.2302046884880935 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L};{[DA]|[EG]}YV{I|L}{I|L}[KP] 6.9977;5.9164 +;- + 57 + 1 1.094 63550.7 1.0 11069 5673 16740 HBL1_DMSO_200M_050219_1,16744 HBL1_DMSO_200M_050219_1,16744,DAYVLPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16745 80.904 268.0 1171900.0 25 0 154500.0 + 38169 TPPVVLRL 8 192 447.7918948082776 893.5692366833551 2 447.7915222048759 MULTI CID FTMS 0 0 0 16740 579068.375 0.1736450333451307 -4 0.1353302001953125 5 Unmodified _TPPVVLRL_ ENSG00000181163|ENST00000296930|NPM1;ENST00000412580.1_1_2:122466160-122466664:-|nuORF;ENST00000434232.1_1_7:36858782-36858980:+|nuORF;ENST00000502784.2_1_5:93019019-93019256:-|nuORF;ENST00000518587.1_1_5:170814889-170819841:+|nuORF;nc|ENSG00000181163|P06748-2|NPM1;nc|ENSG00000181163|P06748-3|NPM1 28.486842064014134 0.4448922141344407 3 TPPVVR{I|L}{I|L} 8 2 + 60.659 0.0 0.0 6.7884 6.7884 94.182 0.0 0.0 0.0 41.90838709108904 5.794351190984273 5.794351190984273 41.30842213103484 0 0.3807196863200844 2.0 0.0 0.0 TPPVVR{I|L}{I|L};TV{[HG]|PP}VR{I|L}{I|L};[KP]{I|L}{I|L}QA[KP];TV[K{I|L}]{I|L}HA{I|L};[KP]{I|L}{I|L}AGA[KP];[KP]{I|L}{I|L}AQ[KP];[{I|L}A][KP]{I|L}GA[KP];TV[K{I|L}][HA]{I|L}{I|L};[{I|L}A][KP]{I|L}Q[KP];[KP]{I|L}A{I|L}GA[KP] 6.7884;2.1656;1.3198;1.1817;1.099;0.74095;0.65371;0.40406;0.29561;0.22821 -;-;-;-;-;-;-;-;-;- 1228 + 1 1.094 239719.7 1.0 11070 5673 16740 HBL1_DMSO_200M_050219_1,16745 HBL1_DMSO_200M_050219_1,16745,TPPVVLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16746 80.908 232.0 435830.0 25 0 31230.0 -1 YQRCKWEYQMI 11 110 782.358193485444 1562.7018340376878 2 782.3555786013603 MULTI CID FTMS 0 0 0 16740 523366.875 0.2327493995505926 -6 0.2277908325195312 6 Oxidation (M) _YQRCKWEYQM(Oxidation (M))I_ ENST00000527531.5_1_11:108253785-108256679:-|nuORF 5.296884461304476 0.8501568894076437 3 {[QV]|[N{I|L}]|[RA]|[KV]}YCSQDA{M(Oxidation (M))|F}YQV{I|L} 13 -1 + 119.79 0.0 0.0 7.6657 7.6657 63.82 0.0 0.0 0.0 8.57258184297612 16.642078980768062 8.57258184297612 0.0 0 1.1382104921644451 1.3979400086720375 1.1549471895720984 1.7346368802282015 {[QV]|[N{I|L}]|[RA]|[KV]}YCSQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCSQDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCSQW{M(Oxidation (M))|F}YQV{I|L};[YQ]VCSQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]VCSQDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCS[AG]DA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCSQDA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCS[AG]DA{M(Oxidation (M))|F}YKV{I|L};[YQ]VCSQW{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCS[AG]W{M(Oxidation (M))|F}YQV{I|L} 7.6657;7.6657;7.2407;7.1172;7.1172;7.0852;7.0852;7.0852;6.6921;6.6585 -;-;-;-;-;-;-;-;-;- 3774 1 1.094 77171.9 1.0 11071 5673 16740 HBL1_DMSO_200M_050219_1,16746 HBL1_DMSO_200M_050219_1,16746,YQRCKWEYQMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16747 80.913 240.0 1831500.0 25 0 210720.0 + 2369 AQLTHDELIQL 11 148 640.8462990132938 1279.6780450933877 2 640.8460571169853 MULTI CID FTMS 0 0 0 16740 416255.84375 0.6399120719350996 -2 0.01934814453125 7 Unmodified _AQLTHDELIQL_ ENSG00000156675|ENST00000330843|RAB11FIP1;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;ENST00000523182.5_1_8:37720415-37730726:-|nuORF;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1 46.0223103267499 0.1396584557920269 3 [NP]{I|L}QA{[QG]|[NA]}QA{I|L}Q{I|L} 12 8 + 82.988 0.0 0.0 6.4851 6.4851 81.186 0.0 0.0 0.0 9.526292130251164 16.61181443446617 9.526292130251164 2.3888208891513614 0 0.6694451763165201 1.3010299956639813 0.0 1.0709991640913 [NP]{I|L}QA{[QG]|[NA]}QA{I|L}Q{I|L};[NP]{I|L}AGA{[QG]|[NA]}QA{I|L}Q{I|L};[NP]{I|L}QA{[QG]|[NA]}[AG]A{I|L}Q{I|L};[NP]{I|L}QA{[QG]|[NA]}QA{I|L}[AG]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PQA{[QG]|[NA]}QA{I|L}Q{I|L};[NP]{I|L}AEV{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}Q{I|L};[NP]{I|L}QQQQA{I|L}Q{I|L};[NP]{I|L}[EP]DE{I|L}{I|L}Q{I|L};[NP]{I|L}AGA{[QG]|[NA]}QA{I|L}[AG]{I|L};[NP]{I|L}AGA{[QG]|[NA]}[AG]A{I|L}Q{I|L} 6.4851;6.2984;5.7741;5.7741;5.7406;5.7265;5.6365;5.6265;5.5894;5.5894 -;-;-;-;-;-;-;-;-;- 17420 1 1.094 324888.5 1.0 11072 5673 16740 HBL1_DMSO_200M_050219_1,16747 HBL1_DMSO_200M_050219_1,16747,AQLTHDELIQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16748 80.92 379.0 246220.0 25 0 25703.0 + 22606 LPYIDGFRHI 10 107 410.8924066950961 1229.6553906854883 3 410.8921996951103 MULTI CID FTMS 0 0 0 16740 217112.609375 0.7958068960809085 1 -0.0282363891601562 8 Unmodified _LPYIDGFRHI_ ENSG00000114388|ENST00000232501|NPRL2;ENST00000429366.5_1_3:50385517-50386910:-|nuORF;ENST00000461020.5_1_3:50386114-50386910:-|nuORF;ENST00000467294.1_1_3:50386114-50386411:-|nuORF;ENST00000487632.5_1_3:50385039-50386411:-|nuORF;ENST00000493465.5_1_3:50385212-50386210:-|nuORF;nc|ENSG00000114388|Q8WTW4-2|NPRL2 41.95555342248728 0.1369168616057562 3 {I|L}PY{I|L}DG{M(Oxidation (M))|F}[RH]{I|L} 10 0 + 71.787 0.0 0.0 5.838 5.838 85.456 0.0 0.0 0.0 30.511525224473807 7.781512503836424 7.781512503836424 7.781512503836424 0 0.5138793319624578 1.3979400086720375 0.3807196863200844 0.4247425010840047 + + {I|L}PY{I|L}DG{M(Oxidation (M))|F}[RH]{I|L};{I|L}PY{I|L}DG{M(Oxidation (M))|F}[R{I|L}]H;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}DG{M(Oxidation (M))|F}[RH]{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}DG{M(Oxidation (M))|F}[R{I|L}]H;{I|L}PY{I|L}{I|L}AAQQ[DV];{I|L}PY[YK][R{M(Oxidation (M))|F}]M{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[YK][R{M(Oxidation (M))|F}]M{I|L} 5.838;5.2052;5.0412;4.4083;3.8914;3.3172;2.175 +;-;-;-;-;-;- + 393 + 1 1.094 79694.0 1.0 11073 5673 16740 HBL1_DMSO_200M_050219_1,16748 HBL1_DMSO_200M_050219_1,16748,LPYIDGFRHI False True LPYIDGFRHI 80.919687 410.89219969511 3235730.5 16740.0 ENST00000493465.5_1_3:50385212-50386210:-|nuORF;;ENST00000461020.5_1_3:50386114-50386910:-|nuORF;;ENSG00000114388|ENST00000232501|NPRL2;;ENST00000429366.5_1_3:50385517-50386910:-|nuORF;;ENST00000487632.5_1_3:50385039-50386411:-|nuORF;;nc|ENSG00000114388|Q8WTW4-2|NPRL2;;ENST00000467294.1_1_3:50386114-50386411:-|nuORF 1.1304547886053722 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16750 80.924 2.7 17720000.0 25 0 1601500.0 + 34563 SPFPDIPKV 9 73 500.27895426962647 998.543355606053 2 500.2790710330009 MULTI CID FTMS 0 0 0 16749 14829444.0 0.6921931686234576 5 -0.2523574829101562 1 Unmodified _SPFPDIPKV_ ENSG00000102699|ENST00000381989|PARP4;ENST00000435945.1_1_Y:28761086-28769767:-|nuORF;ENST00000446672.2_1_13:19955792-19968894:+|nuORF 36.506200033944 0.094635877243972 3 [PS]{M(Oxidation (M))|F}PD{I|L}PKV 9 0 + 66.758 0.0 0.0 6.6855 6.6855 94.404 0.0 0.0 0.0 35.33111113415646 7.523031669330031 7.523031669330031 66.75778616984377 0 1.3494850021680094 1.5228787452803376 0.0 0.0 + + [PS]{M(Oxidation (M))|F}PD{I|L}PKV 6.6855 + + 152 + 1 1.094 42446.4 1.0 11074 5674 16749 HBL1_DMSO_200M_050219_1,16750 HBL1_DMSO_200M_050219_1,16750,SPFPDIPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16751 80.925 5.7 7798500.0 25 0 648590.0 + 44932 YPPWPGKIV 9 69 528.7980392882323 1055.5815256432645 2 528.7977783083916 MULTI CID FTMS 0 0 0 16749 8740179.0 0.3498576860918566 -12 0.5694122314453125 2 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 21.74664581756881 0.2544899275067181 3 YPPW 4 5 48.756 0.0 0.0 4.6188 0.0 0.0 0.0 509.3111001296796 509.3111001296796 31.800602357736665 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + YPPW 4.6188 + + 102 + 1 1.094 41303.8 1.0 11075 5674 16749 HBL1_DMSO_200M_050219_1,16751 HBL1_DMSO_200M_050219_1,16751,YPPWPGKIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16752 80.926 17.0 2682400.0 25 0 271250.0 -1 0 59 620.6407649090406 1858.9004653273216 3 620.6399413943291 MULTI CID FTMS 0 0 0 16749 2254352.75 0.8889759389029175 2 -0.0939254760742187 3 3 {M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SH 8 -1 51.134 0.0 0.0 2.7508 0.0 0.0 290.120126024312 585.3012179010374 875.4213439253494 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SH 2.7508 - 135 + 1 1.094 38802.0 1.0 11076 5674 16749 HBL1_DMSO_200M_050219_1,16752 HBL1_DMSO_200M_050219_1,16752, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16753 80.927 41.0 1303600.0 25 0 95216.0 -1 0 82 881.9051346241091 1761.795716315018 2 881.9054443240166 MULTI CID FTMS 0 0 0 16749 1589876.25 0.2024027135786955 8 -0.4831466674804687 4 3 QY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L} 13 -1 60.106 0.0 0.0 3.4116 0.0 0.0 230.15467735193064 0.0 230.15467735193064 0.0 47.40248124574259 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.3054621874040891 QY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L} 3.4116 - 1774 + 1 1.094 44426.6 1.0 11077 5674 16749 HBL1_DMSO_200M_050219_1,16753 HBL1_DMSO_200M_050219_1,16753, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16754 80.928 26.0 1849200.0 25 0 276510.0 + 45082 YPYLGPSTL 9 78 505.7633182339084 1009.5120835346167 2 505.7632934451103 MULTI CID FTMS 0 0 0 16749 1748818.125 0.2290325961423049 8 -0.4831466674804687 5 Unmodified _YPYLGPSTL_ ENSG00000136631|ENST00000644510|VPS45;nc|ENSG00000136631|Q9NRW7-2|VPS45 34.18733598223924 0.1073653526364521 3 {I|L}{M(Oxidation (M))|F}RYGY 6 8 44.619 0.0 0.0 4.4198 0.0 0.0 0.0 207.11477075748283 207.11477075748283 15.577671168887136 0.0 0.0 0.0 0 0.7429928190999391 1.6989700043360187 0.0 0.0 {I|L}{M(Oxidation (M))|F}RYGY 4.4198 - 459 + 1 1.094 39425.1 1.0 11078 5674 16749 HBL1_DMSO_200M_050219_1,16754 HBL1_DMSO_200M_050219_1,16754,YPYLGPSTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16755 80.932 167.0 843930.0 25 0 47130.0 + 4441 DAWKQLQTF 9 172 568.7906501869288 1135.5667474406575 2 568.7907592654228 MULTI CID FTMS 0 0 0 16749 1157449.0 0.3935027203455225 8 -0.4831466674804687 6 Unmodified _DAWKQLQTF_ ENSG00000119673|ENST00000238651|ACOT2;ENSG00000184227|ENST00000311148|ACOT1;nc|ENSG00000119673|P49753-2|ACOT2 89.40071534611396 0.0152361884002446 3 {[DA]|[EG]}WKQ{I|L}QT{M(Oxidation (M))|F} 9 0 + 66.926 0.0 0.0 5.8936 5.8936 87.454 0.0 0.0 0.0 16.810070757400894 8.824995917031941 8.824995917031941 9.208187539523747 0 1.6677353201839438 1.3979400086720375 0.6549471895720985 0.2887254899964357 + + {[DA]|[EG]}WKQ{I|L}QT{M(Oxidation (M))|F};{[DA]|[EG]}WKQ{I|L}[AG]T{M(Oxidation (M))|F};{[DA]|[EG]}WK[AG]{I|L}QT{M(Oxidation (M))|F};WW[VP]S[{I|L}T]T{M(Oxidation (M))|F};{[DA]|[EG]}WK[AG]{I|L}[AG]T{M(Oxidation (M))|F};WW[VP]T{[TV]|[{I|L}S]}T{M(Oxidation (M))|F};[AG]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}N{I|L}QT{M(Oxidation (M))|F};[AG]T{[NV]|[RG]}W{I|L}QT{M(Oxidation (M))|F};{[SA]|[TG]}RQ{[DA]|[EG]}{I|L}QT{M(Oxidation (M))|F};[AG]T{[RE]|[WV]}N{I|L}QT{M(Oxidation (M))|F} 5.8936;5.0828;5.0828;4.4133;4.2757;4.0382;3.8015;3.748;3.7089;3.7053 +;-;-;-;-;-;-;-;-;- + 6851 1 1.094 109297.9 1.0 11079 5674 16749 HBL1_DMSO_200M_050219_1,16755 HBL1_DMSO_200M_050219_1,16755,DAWKQLQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16756 80.933 36.0 1192400.0 25 0 223340.0 + 22629 LPYPAPEGIAV 11 51 563.8107681937341 1125.6069834542682 2 563.8109619021416 MULTI CID FTMS 0 0 0 16749 1086964.75 0.8718842113052238 3 -0.1418991088867187 7 Unmodified _LPYPAPEGIAV_ ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR 9.38312468134398 0.8308777417566128 3 AV 2 9 22.959 0.0 0.0 2.0397 0.0 0.0 937.490190707001 0.0 937.490190707001 0.0 12.501225267834 0.0 0.0 0 0.5 0.0 0.0 0.0 + AV 2.0397 + + 18 + 1 1.094 39872.4 1.0 11080 5674 16749 HBL1_DMSO_200M_050219_1,16756 HBL1_DMSO_200M_050219_1,16756,LPYPAPEGIAV False True LPYPAPEGIAV 80.932939 563.810961902142 9812291.0 16749.0 ENSG00000183337|ENST00000378444|BCOR;;nc|ENSG00000183337|Q6W2J9-3|BCOR;;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;;nc|ENSG00000183337|Q6W2J9-2|BCOR;;nc|ENSG00000183337|Q6W2J9-4|BCOR 2.5233963330586757 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16757 80.935 77.0 937340.0 25 0 153540.0 + 15279 IPHVLFLPRES 11 80 654.3745547642033 1306.7345565952064 2 654.3749877810478 MULTI CID FTMS 0 0 0 16749 1051657.75 0.813805023109002 8 -0.4831466674804687 8 Unmodified _IPHVLFLPRES_ REV__ENSG00000169710|ENST00000306749|FASN 2.9952420565917617 0.861016188266951 3 {M(Oxidation (M))|F} 1 -1 0.71334 0.0 0.0 0.054589 0.0 0.0 983.5553401418846 173.08260523013908 1156.6379453720238 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.054589 + + 11 + 1 1.094 68486.2 1.0 11081 5674 16749 HBL1_DMSO_200M_050219_1,16757 HBL1_DMSO_200M_050219_1,16757,IPHVLFLPRES False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16758 80.939 199.0 826640.0 25 0 79760.0 + 44885 YPPNPWREI 9 140 586.2983824392117 1170.5822119452232 2 586.2990600466728 MULTI CID FTMS 0 0 0 16749 758983.0625 0.4204626466484494 11 -0.73590087890625 9 Unmodified _YPPNPWREI_ ENSG00000115825|ENST00000234179|PRKD3 29.84058131909904 0.1515068451768857 3 YPPN{I|L}SPP{[WT]|[RM]} 10 5 + 85.94 0.0 0.0 7.3416 7.3416 91.069 0.0 0.0 0.0 46.532577433616986 0.4698372174895127 0.4698372174895127 9.164539485499247 0 0.805462187404089 2.0 0.4247425010840047 0.805462187404089 YPPN{I|L}SPP{[WT]|[RM]};YPPGG{I|L}SPP{[WT]|[RM]};YPPN{I|L}[TP]PC(Carbamidomethyl (C)){I|L};YPPN{I|L}WW[VP];{[QN]|[E{I|L}]|[KN]}WAS{I|L}NP{[QN]|[E{I|L}]|[KN]};YPPN{I|L}[TP]P[CG]{I|L};YP{I|L}NPSPP{[WT]|[RM]};YPPGG{I|L}[TP]PC(Carbamidomethyl (C)){I|L};YPPGG{I|L}WW[VP];YPPNPW{[RE]|[WV]}{I|L} 7.3416;6.5587;6.1457;6.1446;5.4397;5.3628;5.2593;5.0376;5.0327;5.0293 -;-;-;-;-;-;-;-;-;+ + 4379 + 1 1.094 131570.3 1.0 11082 5674 16749 HBL1_DMSO_200M_050219_1,16758 HBL1_DMSO_200M_050219_1,16758,YPPNPWREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16759 80.943 232.0 486830.0 25 0 47667.0 + 39894 VFNDAMVNL 9 150 511.7522141725447 1021.4898754118894 2 511.2545654177666 MULTI CID FTMS 0 0 0 16749 620552.375 0.8035499862134179 -17 0.9847412109375 10 Unmodified _VFNDAMVNL_ REV__ENSG00000049656|ENST00000320895|CLPTM1L;REV__nc|ENSG00000049656|Q96KA5-2|CLPTM1L 13.50788311687929 0.4710407108020397 3 [QA]P{I|L}T{M(Oxidation (M))|F} 6 -1 25.877 0.0 0.0 2.5333 0.0 0.0 0.0 361.15381952540696 361.15381952540696 3.7177800564282393 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.25 [QA]P{I|L}T{M(Oxidation (M))|F} 2.5333 - 1448 1 1.094 91087.0 1.0 11083 5674 16749 HBL1_DMSO_200M_050219_1,16759 HBL1_DMSO_200M_050219_1,16759,VFNDAMVNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16760 80.948 255.0 527730.0 25 0 47785.0 + 30696 RFQDQVLDL 9 165 567.3006225919917 1132.5866922507832 2 567.3023559451103 MULTI CID FTMS 0 0 0 16749 366549.46875 0.1551694044479138 10 -0.666168212890625 11 Unmodified _RFQDQVLDL_ ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI 29.84058131909904 0.1515068451768857 3 [{M(Oxidation (M))|F}V]{I|L}VQDYH{I|L} 9 6 + 61.727 0.0 0.0 5.4501 5.4501 77.597 0.0 0.0 0.0 32.61545899243393 7.961434083857526 7.961434083857526 2.218487496163561 0 1.0 0.6777807052660807 0.0 0.2887254899964357 [{M(Oxidation (M))|F}V]{I|L}VQDYH{I|L};[{M(Oxidation (M))|F}V]{I|L}VQDHY{I|L};{[TV]|[{I|L}S]}[KC]DQV{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}VQ{[WN]|[YH]}D{I|L};{[TV]|[{I|L}S]}[KC]D[AG]V{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}V[AG]DYH{I|L};[{M(Oxidation (M))|F}V]{I|L}V[AG]DHY{I|L};[{M(Oxidation (M))|F}V]{I|L}V[AG]{[WN]|[YH]}D{I|L};HH{I|L}[KA]DYH{I|L};[{M(Oxidation (M))|F}V]{I|L}VQ{[WN]|[YH]}VE 5.4501;5.2542;5.1986;4.8925;4.3895;4.3821;4.1862;4.0795;3.9997;3.8888 -;-;-;-;-;-;-;-;-;- 844 + 1 1.094 107141.4 1.0 11084 5674 16749 HBL1_DMSO_200M_050219_1,16760 HBL1_DMSO_200M_050219_1,16760,RFQDQVLDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16761 80.953 263.0 346200.0 25 0 55382.0 -1 0 46 843.6274202263536 0 843.6273681521416 PEAK CID FTMS 0 0 0 16749 331284.40625 1.0 0 0.0 12 3 D 1 -1 4.6041 0.0 0.0 0.2732 0.0 0.0 1042.938237814232 524.2374494983791 1567.175687312611 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.2732 - 1 + 1 1.094 70800.5 1.0 11085 5674 16749 HBL1_DMSO_200M_050219_1,16761 HBL1_DMSO_200M_050219_1,16761, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16762 80.958 318.0 494870.0 25 0 31866.0 + 18358 KVPATVDHL 9 176 490.282613422009 978.550673910818 2 490.2827941775322 MULTI CID FTMS 0 0 0 16749 227387.40625 1.0 0 0.0 13 Unmodified _KVPATVDHL_ REV__ENSG00000130035|ENST00000252318|GALNT8 14.838274106304384 0.4350285940865338 3 [VP]EPVCK{M(Oxidation (M))|F} 8 -1 23.097 0.0 0.0 2.3603 0.0 0.0 0.0 76.08220402239922 76.08220402239922 2.919562702124452 0.0 0.0 0.0 0 0.2742275032520141 1.3010299956639813 0.0 0.0 [VP]EPVCK{M(Oxidation (M))|F} 2.3603 - 1471 1 1.094 118999.3 1.0 11086 5674 16749 HBL1_DMSO_200M_050219_1,16762 HBL1_DMSO_200M_050219_1,16762,KVPATVDHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16764 80.962 13.0 2562400.0 25 0 399450.0 18730 LALEGGHDL 9 51 462.7438414389623 923.4731299447244 2 462.7440368533134 MULTI CID FTMS 0 0 0 16763 2167286.5 0.4556726159088826 -11 0.4906845092773437 1 Unmodified _LALEGGHDL_ ENSG00000048052|ENST00000686413|HDAC9;ENSG00000061273|ENST00000080059|HDAC7;ENSG00000068024|ENST00000543185|HDAC4;ENSG00000108840|ENST00000682912|HDAC5;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;ENST00000490851.5_1_7:18832955-19035682:+|nuORF;ENST00000494800.1_1_2:239977015-240002822:-|nuORF;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000068024|P56524-2|HDAC4;nc|ENSG00000068024|P56524|HDAC4;nc|ENSG00000108840|Q9UQL6-2|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5 12.531546534597751 0.4974689918368763 3 [{I|L}A]P 3 7 34.705 0.0 0.0 3.7581 0.0 0.0 0.0 639.2775954609676 639.2775954609676 22.715299873086607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P 3.7581 - 6 + 1 1.094 31385.4 1.0 11087 5675 16763 HBL1_DMSO_200M_050219_1,16764 HBL1_DMSO_200M_050219_1,16764,LALEGGHDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16765 80.964 16.0 2355300.0 25 0 337970.0 26779 PAGVSLVLD 9 55 435.75005791592616 869.4855628986523 2 435.7498962283134 MULTI CID FTMS 0 0 0 16763 2695142.25 0.8844998515792412 3 -0.1411285400390625 2 Unmodified _PAGVSLVLD_ ENSG00000118523|ENST00000367976|CCN2;nc|ENSG00000118523|P29279-2|CCN2 18.13498045792455 0.3457906370836843 3 [QP]VS{I|L} 5 5 23.06 0.0 0.0 2.6521 0.0 0.0 0.0 342.1641267016399 342.1641267016399 7.486512420283233 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 [QP]VS{I|L} 2.6521 - 35 1 1.094 34473.0 1.0 11088 5675 16763 HBL1_DMSO_200M_050219_1,16765 HBL1_DMSO_200M_050219_1,16765,PAGVSLVLD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16766 80.965 31.0 1451000.0 25 0 326740.0 + 16883 KIFSGVFVKV 10 66 562.346911539554 1122.6792701459078 2 562.3475219607353 MULTI CID FTMS 0 0 0 16763 1749424.0 0.0634685358342703 13 -0.9702987670898438 3 Unmodified _KIFSGVFVKV_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 29.43715596616401 0.3072975788498757 3 K{I|L}{M(Oxidation (M))|F}[{I|L}V][YN]VK 9 5 + 49.957 0.0 0.0 4.4498 4.4498 72.378 0.0 0.0 0.0 21.478174818886373 1.0914446942506828 1.0914446942506828 1.0914446942506828 0 1.2302046884880935 1.0 0.0 0.3252574989159953 K{I|L}{M(Oxidation (M))|F}[{I|L}V][YN]VK;K{I|L}{M(Oxidation (M))|F}[{I|L}V][YN]KV;K{I|L}[H{I|L}]KTQQK;K{I|L}[H{I|L}]KT{[RE]|[WV]}V;K{I|L}[H{I|L}]KT[RD]{I|L} 4.4498;4.3526;3.1592;3.0619;2.9349 -;-;-;-;- 216 + 1 1.094 40022.7 1.0 11089 5675 16763 HBL1_DMSO_200M_050219_1,16766 HBL1_DMSO_200M_050219_1,16766,KIFSGVFVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16767 80.966 35.0 1469600.0 25 0 129180.0 + 15375 IPNFDVREI 9 66 551.7980959249381 1101.5816389166762 2 551.7976562380791 MULTI CID FTMS 0 0 0 16763 1513360.125 0.4026378676605083 9 -0.6275253295898438 4 Unmodified _IPNFDVREI_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 36.506200033944 0.094635877243972 3 {I|L}PN{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L} 9 0 + 76.916 0.0 0.0 6.9824 6.9824 90.739 0.0 0.0 0.0 46.73902187720806 3.4678748622465605 3.4678748622465605 9.208187539523747 0 0.3807196863200844 1.6989700043360187 0.0 0.8494850021680094 + + {I|L}PN{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L};{I|L}PGG{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L} 6.9824;6.1464 +;- + 61 + 1 1.094 49021.6 1.0 11090 5675 16763 HBL1_DMSO_200M_050219_1,16767 HBL1_DMSO_200M_050219_1,16767,IPNFDVREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16768 80.97 190.0 803540.0 25 0 61896.0 -1 0 136 1035.1630235864693 3102.467241359608 3 1035.498706042767 MULTI CID FTMS 0 0 0 16763 1062771.25 0.7262654251437938 2 -0.1032562255859375 5 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YASA{M(Oxidation (M))|F}SM 9 -1 51.609 0.0 0.0 1.6635 0.0 0.0 0.0 2082.0181806508767 2082.0181806508767 20.14268234850924 0.0 0.0 0.0 0 0.0 1.154901959985743 1.6237125054200234 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YASA{M(Oxidation (M))|F}SM 1.6635 - 13209 1 1.094 106600.5 1.0 11091 5675 16763 HBL1_DMSO_200M_050219_1,16768 HBL1_DMSO_200M_050219_1,16768, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16769 80.973 176.0 763940.0 25 0 152010.0 + 15952 ITAKFKSKVA 10 124 546.8400286134854 1091.6655042937707 2 546.8408080935478 MULTI CID FTMS 0 0 0 16763 1036803.6875 0.2859743794842798 6 -0.3824386596679687 6 Unmodified _ITAKFKSKVA_ REV__ENSG00000133026|ENST00000360416|MYH10;REV__nc|ENSG00000133026|P35580-2|MYH10;REV__nc|ENSG00000133026|P35580-3|MYH10;REV__nc|ENSG00000133026|P35580-5|MYH10;REV__nc|ENSG00000133026|P35580|MYH10 6.723162845929126 0.6955379296933136 3 {M(Oxidation (M))|F} 1 -1 10.969 0.0 0.0 1.0048 0.0 0.0 926.585942991816 0.0 926.585942991816 0.0 0.1316446936117454 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0048 + + 78 + 1 1.094 109985.2 1.0 11092 5675 16763 HBL1_DMSO_200M_050219_1,16769 HBL1_DMSO_200M_050219_1,16769,ITAKFKSKVA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16770 80.974 35.0 1602500.0 25 0 126630.0 + 21760 LPMLELKPV 9 86 520.3144726798404 1038.614392426481 2 520.3150512576103 MULTI CID FTMS 0 0 0 16763 1008589.9375 0.6279828666558225 -5 0.1584396362304687 7 Unmodified _LPMLELKPV_ REV__ENSG00000149743|ENST00000317459|TRPT1;REV__ENST00000536158.5_1_11:63991868-63992278:-|nuORF;REV__ENST00000539436.5_1_11:63991868-63992452:-|nuORF;REV__nc|ENSG00000149743|Q86TN4-2|TRPT1;REV__nc|ENSG00000149743|Q86TN4-3|TRPT1;REV__nc|ENSG00000149743|Q86TN4-4|TRPT1 20.453626601364224 0.2830276176381075 3 [{I|L}P]E{I|L}PM 6 -1 49.13 0.0 0.0 4.7303 0.0 0.0 0.0 355.23149382712444 355.23149382712444 22.754537344402905 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 [{I|L}P]E{I|L}PM 4.7303 - 233 1 1.094 50681.0 1.0 11093 5675 16763 HBL1_DMSO_200M_050219_1,16770 HBL1_DMSO_200M_050219_1,16770,LPMLELKPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16771 80.979 236.0 307490.0 25 0 38798.0 -1 0 96 990.9279726689464 1979.8413924046924 2 990.9285766482352 MULTI CID FTMS 0 0 0 16763 527588.125 0.7586907257282439 5 -0.2815704345703125 8 3 [YQ]{I|L}E 4 -1 33.72 0.0 0.0 1.7032 0.0 0.0 0.0 1443.5676246647113 1443.5676246647113 23.129734031706267 0.0 0.0 0.0 0 0.4247425010840047 1.0 0.0 0.75 [YQ]{I|L}E 1.7032 - 2439 1 1.094 51634.9 1.0 11094 5675 16763 HBL1_DMSO_200M_050219_1,16771 HBL1_DMSO_200M_050219_1,16771, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16772 80.983 243.0 598950.0 25 0 35173.0 + 5574 DMYEQFQNI 9 138 594.2553221062653 1186.4960912793306 2 594.2561523318291 MULTI CID FTMS 0 0 0 16763 431331.0625 0.1364374802795928 9 -0.6275253295898438 9 Unmodified _DMYEQFQNI_ ENSG00000100883|ENST00000216774|SRP54;ENST00000553923.1_1_14:35483969-35488318:+|nuORF;ENST00000556445.1_1_14:35487839-35488318:+|nuORF;nc|ENSG00000100883|P61011-2|SRP54 29.081581746732265 0.1611639662936252 3 [NP]{I|L}GV{I|L} 6 8 47.312 0.0 0.0 3.9875 0.0 0.0 0.0 590.1170073523915 590.1170073523915 18.18205088429579 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 1.1861818737241734 [NP]{I|L}GV{I|L} 3.9875 - 1167 1 1.094 111128.0 1.0 11095 5675 16763 HBL1_DMSO_200M_050219_1,16772 HBL1_DMSO_200M_050219_1,16772,DMYEQFQNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16773 80.988 250.0 307430.0 25 0 53405.0 + 45742 YYILKVKSLFP 11 117 685.9084867260023 1369.8024205188044 2 685.9097778201103 MULTI CID FTMS 0 0 0 16763 393779.46875 0.3998794802666628 6 -0.3824386596679687 10 Unmodified _YYILKVKSLFP_ REV__ENSG00000253710|ENST00000521508|ALG11 3.2813086475875832 0.8596665074481906 3 [KP]G{M(Oxidation (M))|F}AA{I|L} 7 -1 17.344 0.0 0.0 1.2662 0.0 0.0 0.0 682.4081083452294 682.4081083452294 7.854123043345069 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 [KP]G{M(Oxidation (M))|F}AA{I|L} 1.2662 - 304 1 1.094 65998.6 1.0 11096 5675 16763 HBL1_DMSO_200M_050219_1,16773 HBL1_DMSO_200M_050219_1,16773,YYILKVKSLFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16774 80.993 260.0 91978.0 25 0 10077.0 14557 IHMLDGILLPP 11 54 609.8495875822686 1217.684622231337 2 610.3516723513603 MULTI CID FTMS 0 0 0 16763 331919.5625 0.1522319423552388 18 -1.317413330078125 11 Unmodified _IHMLDGILLPP_ ENSG00000010327|ENST00000321725|STAB1;ENST00000481607.1_1_3:52529402-52542549:+|nuORF;nc|ENSG00000010327|Q9NY15-2|STAB1 1.3295316138638542 0.8688751186870782 3 S 1 11 8.5392 0.0 0.0 0.70126 0.0 0.0 608.4021037760621 519.2384737604124 1127.6405775364744 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 S 0.70126 - 2 + 1 1.094 23981.3 1.0 11097 5675 16763 HBL1_DMSO_200M_050219_1,16774 HBL1_DMSO_200M_050219_1,16774,IHMLDGILLPP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16775 80.998 264.0 172500.0 25 0 16932.0 9350 FILMTWTVLK 10 86 626.3613996006916 1250.708246268183 2 626.8619262576103 MULTI CID FTMS 0 0 0 16763 308253.65625 0.2431075729378146 13 -0.9702987670898438 12 Unmodified _FILMTWTVLK_ L1MC3_dup7320|chrX:70161794-70162664:+|1.112392509996284|0.2551508396873335|2.12|48.0|58|3|anti-sense 6.723162845929126 0.6955379296933136 3 WAQ{I|L} 4 8 17.193 0.0 0.0 1.3746 0.0 0.0 734.4185047834 0.0 734.4185047834 0.0 6.083493856482249 0.0 0.0 0 0.0994850021680094 0.0 0.0 0.0 WAQ{I|L} 1.3746 - 61 1 1.094 42933.1 1.0 11098 5675 16763 HBL1_DMSO_200M_050219_1,16775 HBL1_DMSO_200M_050219_1,16775,FILMTWTVLK False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 16776 81.003 278.0 211040.0 25 0 14697.0 -1 0 78 988.3250610232352 0 988.3250610232352 PEAK CID FTMS 0 0 0 -1 0 13 3 YTV{I|L} 4 -1 17.423 0.0 0.0 0.88233 0.0 0.0 1027.157616087683 468.1922701471313 1495.3498862348142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 YTV{I|L} 0.88233 - 920 + 1 1.094 46943.1 1.0 11099 5675 16763 HBL1_DMSO_200M_050219_1,16776 HBL1_DMSO_200M_050219_1,16776, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16777 81.008 298.0 108570.0 25 0 7708.8 -1 0 47 1094.0437076978758 0 1094.046435534954 PEAK CID FTMS 0 0 0 16763 230680.796875 1.0 0 0.0 14 3 HC 2 -1 7.4743 0.0 0.0 0.3419 0.0 0.0 1115.5399777963391 827.4710787408811 1943.01105653722 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HC 0.3419 - 4 + 1 1.094 30376.8 1.0 11100 5675 16763 HBL1_DMSO_200M_050219_1,16777 HBL1_DMSO_200M_050219_1,16777, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16778 81.014 289.0 280720.0 25 0 35938.0 -1 0 94 1005.56212157011 0 1005.56212157011 PEAK CID FTMS 0 0 0 -1 0 15 3 MC{I|L}VV{I|L}D 7 -1 42.097 0.0 0.0 2.0953 0.0 0.0 1050.6620354516233 182.0577334039672 1232.7197688555905 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4146314764933354 0.0 MC{I|L}VV{I|L}D 2.0953 - 2519 + 1 1.094 59600.1 1.0 11101 5675 16763 HBL1_DMSO_200M_050219_1,16778 HBL1_DMSO_200M_050219_1,16778, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16780 81.018 6.1 5593200.0 25 0 696920.0 + 37305 TIRYPDPLI 9 57 544.3109498194198 1086.6073467056394 2 544.3121826052666 MULTI CID FTMS 0 0 0 16779 5948969.5 0.1893700829259951 13 -0.9720840454101562 1 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 27.628801355627647 0.1796483985696185 3 P{I|L}{I|L} 3 6 30.005 0.0 0.0 2.7614 0.0 0.0 745.3777366744692 0.0 745.3777366744692 0.0 10.96401568399578 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + P{I|L}{I|L} 2.7614 + + 50 1 1.055 36291.2 1.0 11102 5676 16779 HBL1_DMSO_200M_050219_1,16780 HBL1_DMSO_200M_050219_1,16780,TIRYPDPLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16781 81.019 27.0 1492900.0 25 0 180250.0 -1 IVEEMKAV 8 74 312.1694958394765 933.4866581186296 3 312.1694213747978 MULTI CID FTMS 0 0 0 16779 1785610.625 0.8862532422798253 4 -0.226287841796875 2 Oxidation (M) _IVEEM(Oxidation (M))KAV_ ENSG00000168077|ENST00000301904|SCARA3;nc|ENSG00000168077|Q6AZY7-2|SCARA3 7.910154910731844 0.7763180056447161 3 V 1 -1 12.764 0.0 0.0 1.3674 0.0 0.0 816.407127334253 0.0 816.407127334253 0.0 4.805409669848153 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3674 + + 19 + 1 1.055 39874.4 1.0 11103 5676 16779 HBL1_DMSO_200M_050219_1,16781 HBL1_DMSO_200M_050219_1,16781,IVEEMKAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16782 81.02 60.0 1359400.0 25 0 100830.0 + 15598 IPYQDLPHL 9 96 548.2950953149975 1094.575637696795 2 548.2952758669853 MULTI CID FTMS 0 0 0 16779 1661761.875 0.2982559621824732 -5 0.141510009765625 3 Unmodified _IPYQDLPHL_ ENSG00000074416|ENST00000265052|MGLL;ENST00000479967.5_1_3:127434467-127541990:-|nuORF;nc|ENSG00000074416|Q99685-2|MGLL;nc|ENSG00000074416|Q99685|MGLL 53.832793166522166 0.0319663582346103 3 {I|L}PYQD{I|L}PH{I|L} 9 0 + 85.091 0.0 0.0 7.7739 7.7739 94.805 0.0 0.0 0.0 51.90359493906605 9.921525057367404 9.921525057367404 14.208187539523747 0 1.174742501084005 1.5228787452803376 0.3252574989159953 0.5 + + {I|L}PYQD{I|L}PH{I|L};{I|L}PY[AG]D{I|L}PH{I|L};{I|L}PYQDKKG{M(Oxidation (M))|F};{I|L}PY[AG]DKKG{M(Oxidation (M))|F} 7.7739;6.4758;4.8858;4.0446 +;-;-;- + 357 + 1 1.055 69402.2 1.0 11104 5676 16779 HBL1_DMSO_200M_050219_1,16782 HBL1_DMSO_200M_050219_1,16782,IPYQDLPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16783 81.022 21.0 2485800.0 25 0 284290.0 + 14444 IFQVAQEL 8 77 474.26369919270326 946.5128454522064 2 474.2641479372978 MULTI CID FTMS 0 0 0 16779 1348265.75 0.9013294746921656 -2 0.0939254760742187 4 Unmodified _IFQVAQEL_ ENSG00000116918|ENST00000366639|TSNAX;ENST00000476913.1_1_1:231665086-231678380:+|nuORF;ENST00000602825.5_1_1:231664421-231690428:+|nuORF 32.116972079565 0.368454113111938 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VAQE{I|L} 8 2 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VAQ + + 18.188 12.853 1.8726 1.9215 1.9215 48.758 0.0 0.0 0.0 0.0 -1.655462488490688 -1.655462488490688 0.0 0 0.0 0.0 0.5 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VAQE{I|L} 1.9215 - 105 + 1 1.055 47805.6 1.0 11105 5676 16779 HBL1_DMSO_200M_050219_1,16783 HBL1_DMSO_200M_050219_1,16783,IFQVAQEL False True IFQVAQEL 81.021528 474.264147937298 12857588.0 16779.0 ENST00000602825.5_1_1:231664421-231690428:+|nuORF;;ENST00000476913.1_1_1:231665086-231678380:+|nuORF;;ENSG00000116918|ENST00000366639|TSNAX 2.2315613428751626 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16784 81.025 152.0 969270.0 25 0 79380.0 + 30830 RIKDEFQLL 9 137 581.3350933478131 1160.655633762426 2 581.3348266482353 MULTI CID FTMS 0 0 0 16779 1355968.625 0.7775576112344192 3 -0.1584320068359375 5 Unmodified _RIKDEFQLL_ ENSG00000104964|ENST00000327141|TLE5;ENST00000585782.1_1_19:3057505-3062198:-|nuORF;ENST00000586003.1_1_19:3061156-3062198:-|nuORF;nc|ENSG00000104964|Q08117-2|TLE5 69.10491478415734 0.0214449631113747 3 [R{I|L}]KDE{M(Oxidation (M))|F}Q{I|L}{I|L} 9 0 + 76.485 0.0 0.0 6.5898 6.5898 81.699 0.0 0.0 0.0 16.100067642479345 46.52880645020623 16.100067642479345 2.5134875797167666 0 0.8494850021680094 1.0457574905606752 0.9489700043360187 0.7742275032520141 + + [R{I|L}]KDE{M(Oxidation (M))|F}Q{I|L}{I|L};[R{I|L}]KDEQ{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}[AG]{I|L}{I|L};[R{I|L}]KDE[AG]{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}{I|L}Q{I|L};[R{I|L}]KDE{I|L}{M(Oxidation (M))|F}Q{I|L};[R{I|L}]KD{I|L}TCS{I|L}{I|L};[R{I|L}]KDT{I|L}CS{I|L}{I|L};[Q{I|L}]{I|L}{[WT]|[RM]}{M(Oxidation (M))|F}Q{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}{I|L}[AG]{I|L} 6.5898;6.3733;5.7965;5.5799;5.2743;5.175;4.8425;4.6908;4.4927;4.481 +;-;-;-;-;-;-;-;-;- + 2302 1 1.055 115796.0 1.0 11106 5676 16779 HBL1_DMSO_200M_050219_1,16784 HBL1_DMSO_200M_050219_1,16784,RIKDEFQLL True True RIKDEFQLL 81.024562 581.334826648235 57865823.0 16779.0 ENST00000586003.1_1_19:3061156-3062198:-|nuORF;;ENST00000585782.1_1_19:3057505-3062198:-|nuORF;;ENSG00000104964|ENST00000327141|TLE5;;nc|ENSG00000104964|Q08117-2|TLE5 5.179911454518636 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16785 81.026 76.0 709320.0 25 0 53383.0 + 26197 NQFVQPASVGV 11 94 573.300677006193 1144.586801079186 2 573.3011962771416 MULTI CID FTMS 0 0 0 16779 1090388.0 0.0317851190369306 14 -1.052520751953125 6 Unmodified _NQFVQPASVGV_ REV__ENST00000298295.3_1_10:45472209-45472434:-|nuORF 26.268140514670165 0.4754186812857754 3 [H{I|L}]S{M(Oxidation (M))|F}{I|L}TSVE{I|L} 10 -1 + 45.187 0.0 0.0 3.9479 3.9479 74.051 0.0 0.0 0.0 4.259687322722812 4.358925716429333 4.259687322722812 3.0102999566398125 0 0.3935078169319297 0.0 0.7887254899964358 0.0 [H{I|L}]S{M(Oxidation (M))|F}{I|L}TSVE{I|L};[H{I|L}]S{I|L}{M(Oxidation (M))|F}TSVE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VST{I|L}{M(Oxidation (M))|F}[YR];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VST{M(Oxidation (M))|F}{I|L}[YR];[H{I|L}]{I|L}S{M(Oxidation (M))|F}TSVE{I|L};[H{I|L}]S{I|L}T{M(Oxidation (M))|F}SVE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}H{I|L}TSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VS{M(Oxidation (M))|F}T{I|L}[YR];[H{I|L}]{I|L}ST{M(Oxidation (M))|F}SVE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[YR]V[YR] 3.9479;3.6849;3.3072;3.0442;3.005;3.005;2.965;2.6166;2.3252;2.1642 -;-;-;-;-;-;-;-;-;- 472 1 1.055 45325.7 1.0 11107 5676 16779 HBL1_DMSO_200M_050219_1,16785 HBL1_DMSO_200M_050219_1,16785,NQFVQPASVGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16786 81.03 170.0 660580.0 25 0 141370.0 + 41878 VPYSTSASLYI 11 122 600.8109659558507 1199.6073789785014 2 600.8115112185478 MULTI CID FTMS 0 0 0 16779 1066248.875 0.8764356014887297 2 -0.085845947265625 7 Unmodified _VPYSTSASLYI_ ENSG00000060982|ENST00000261192|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;nc|ENSG00000060982|P54687-5|BCAT1 46.0223103267499 0.1396584557920269 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}STSAVS{I|L}Y{I|L} 11 2 + 70.883 0.0 0.0 5.9088 5.9088 79.262 0.0 0.0 0.0 3.1439395722196224 8.604710706454412 3.1439395722196224 2.257724967479845 0 0.7742275032520141 1.0969100130080565 3.274227503252014 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}STSAVS{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}STSASV{I|L}Y{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}TSAVS{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}STSAVTVY{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}TSASV{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}STSAS{I|L}VY{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}TSAVTVY{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}SASV{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}TSAS{I|L}VY{I|L};[Y{I|L}][DG]SAVS{I|L}Y{I|L} 5.9088;5.7206;5.6468;5.5324;5.4585;5.3442;5.2703;5.0915;5.0821;4.8733 -;-;-;-;-;-;-;-;-;- 3326 1 1.055 83767.7 1.0 11108 5676 16779 HBL1_DMSO_200M_050219_1,16786 HBL1_DMSO_200M_050219_1,16786,VPYSTSASLYI False True VPYSTSASLYI 81.029659 600.811511218548 28317176.0 16779.0 nc|ENSG00000060982|P54687-2|BCAT1;;nc|ENSG00000060982|P54687-4|BCAT1;;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;;nc|ENSG00000060982|P54687-5|BCAT1;;nc|ENSG00000060982|P54687-3|BCAT1;;ENSG00000060982|ENST00000261192|BCAT1 4.939451217651367 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16787 81.031 60.0 869830.0 25 0 97914.0 + + 36200 SVVDLTCRL 9 76 503.2785292671678 1004.5425056011356 2 503.2739440798759 MULTI CID FTMS 0 0 0 16779 1037275.125 0.3000025596127667 16 -1.2113800048828125 8 Unmodified _SVVTDLTTLG_ ENSG00000105679|ENST00000222286|GAPDHS;nc|ENSG00000111640|P04406-2|GAPDH;ENSG00000111640|ENST00000229239|GAPDH;ENST00000403475.2_1_6:84102811-84103060:+|nuORF;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 18.1463463914782 0.5430639438673815 3 [VS]VD{I|L}T{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L} 9 -1 + 47.113 0.0 0.0 4.69 4.69 71.99 0.0 0.0 0.0 21.25447181216778 0.1163830741207405 0.1163830741207405 0.4575749056067479 0 0.0 2.0 0.0 0.0 [VS]VD{I|L}T{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};[VS]VD{I|L}T{[MG]|[TS]}A{I|L};[VS]VD{I|L}T[TA]S{I|L};[VS]VD[YR]PG{I|L};[VS]V[YR]DV[PA];[VS]VD{I|L}T[TA]TV;[VS]VD[YR]PAV;[VS]V[{I|L}A][W{M(Oxidation (M))|F}]A{I|L};[VS][WY][{I|L}A]V[PA];[VS]V[{I|L}A][WM]S{I|L} 4.69;4.6444;4.1993;3.8875;3.8321;3.7491;3.4372;2.5237;2.2652;2.0786 -;-;-;-;-;-;-;-;-;- 141 + 1 1.055 46614.0 1.0 11109 5676 16779 HBL1_DMSO_200M_050219_1,16787 HBL1_DMSO_200M_050219_1,16787,SVVTDLTTLG False False SVVDLTCRL 81.031135 503.273944079876 13703971.0 16779.0 ENSG00000105679|ENST00000222286|GAPDHS;;nc|ENSG00000111640|P04406-2|GAPDH;;ENSG00000111640|ENST00000229239|GAPDH;;ENST00000403475.2_1_6:84102811-84103060:+|nuORF;;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 5.458084901173909 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16788 81.035 227.0 893680.0 25 0 101730.0 + 18856 LASQHEEL 8 162 309.4904109860205 925.4494035582616 3 309.4904968142509 MULTI CID FTMS 0 0 0 16779 868716.875 0.6899673042306934 -10 0.381866455078125 9 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 3 [{I|L}A]P 3 -1 22.24 0.0 0.0 2.4032 0.0 0.0 0.0 641.2521433866397 641.2521433866397 5.786661328054965 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]P 2.4032 - 348 1 1.055 162877.8 1.0 11110 5676 16779 HBL1_DMSO_200M_050219_1,16788 HBL1_DMSO_200M_050219_1,16788,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16789 81.039 206.0 418180.0 25 0 75655.0 + 14431 IFPSSISAM 9 82 952.4805943385552 951.4733178719551 1 952.4833251833916 MULTI CID FTMS 0 0 0 16779 753436.0 0.997038158062002 4 -0.226287841796875 10 Unmodified _IFPSSISAM_ ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1 96.28474662873226 0.0124266067997264 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]S{I|L}SAM 9 0 + 48.94 0.0 0.0 5.1436 5.1436 76.356 0.0 0.0 0.0 1.8032362681534408 11.9849078913372 1.8032362681534408 2.102868501927873 0 1.3116042352767732 0.0 1.774227503252014 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]S{I|L}SAM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RD]{I|L}SAM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AAE{I|L}SAM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]S{[SA]|[TG]}{I|L}M;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]{[WT]|[RM]}AM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AA[{I|L}T]DAM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RD]{[SA]|[TG]}{I|L}M;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AAE{[SA]|[TG]}{I|L}M;{I|L}[WQ][YT]E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]S{[SA]|[TG]}M{I|L} 5.1436;4.9226;4.6006;2.5033;2.3135;2.2917;2.2823;1.9602;1.5265;1.3222 +;-;-;-;-;-;-;-;-;- + 672 1 1.055 64878.2 1.0 11111 5676 16779 HBL1_DMSO_200M_050219_1,16789 HBL1_DMSO_200M_050219_1,16789,IFPSSISAM True False IFPSSISAM 81.039357 952.483325183392 13543249.0 16779.0 nc|ENSG00000127463|Q8N766-4|EMC1;;nc|ENSG00000127463|Q8N766-2|EMC1;;ENSG00000127463|ENST00000477853|EMC1;;nc|ENSG00000127463|Q8N766-3|EMC1 6.1569013595581055 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16790 81.041 48.0 306300.0 25 0 32343.0 4374 DAVFVLKPV 9 41 494.2976801538789 986.5808073745576 2 494.2971374392509 MULTI CID FTMS 0 0 0 16779 710622.5 0.9744591389933296 -1 0.0552825927734375 11 Unmodified _DAVFVLKPV_ ENSG00000197006|ENST00000358154|METTL9;ENST00000564733.1_1_16:21666528-21666750:+|nuORF;nc|ENSG00000197006|Q9H1A3-2|METTL9 4.3292370932331545 0.7635526921153418 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 8 1 1.055 20894.1 1.0 11112 5676 16779 HBL1_DMSO_200M_050219_1,16790 HBL1_DMSO_200M_050219_1,16790,DAVFVLKPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16791 81.045 249.0 283910.0 25 0 41703.0 + -1 SINDLNMIAC 10 103 555.2516158244252 1108.4886787156504 2 555.2513305544853 MULTI CID FTMS 0 0 0 16779 369652.0625 0.3757618563436842 -4 0.1343536376953125 12 Oxidation (M) _SINDLNM(Oxidation (M))IAC_ REV__ENSG00000172594|ENST00000368440|SMPDL3A;REV__nc|ENSG00000172594|Q92484-2|SMPDL3A 21.53697664764585 0.484802182336468 3 {[QV]|[N{I|L}]|[RA]|[KV]}SD{I|L} 5 -1 49.01 0.0 0.0 4.4214 0.0 0.0 0.0 563.1941590225441 563.1941590225441 36.24602458111578 0.0 0.0 0.0 0 0.0 2.0 0.6549471895720984 0.3252574989159953 {[QV]|[N{I|L}]|[RA]|[KV]}SD{I|L} 4.4214 - 315 1 1.055 60739.1 1.0 11113 5676 16779 HBL1_DMSO_200M_050219_1,16791 HBL1_DMSO_200M_050219_1,16791,SINDLNMIAC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16792 81.051 331.0 809280.0 25 0 76174.0 38104 TPLHLAVL 8 167 432.27185047319927 0 432.2711669802666 PEAK CID FTMS 0 0 0 16779 338602.5 0.8814878186168671 -2 0.0939254760742187 13 Unmodified _TPLHLAVL_ ENSG00000235098|ENST00000537107|ANKRD65 38.15118350030904 0.1572189310998713 3 VA{I|L}T 4 7 17.331 0.0 0.0 2.0093 0.0 0.0 131.08603672941132 344.17487512760005 475.26091185701137 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.6139829889124311 0.0 VA{I|L}T 2.0093 - 410 + 1 1.055 205398.0 1.0 11114 5676 16779 HBL1_DMSO_200M_050219_1,16792 HBL1_DMSO_200M_050219_1,16792,TPLHLAVL False True TPLHLAVI 81.051268 432.271166980267 2501430.25 16779.0 ENSG00000109320|ENST00000226574|NFKB1;;ENST00000557100.5_1_14:35871861-35873850:-|nuORF;;nc|ENSG00000109320|P19838-3|NFKB1;;NFKBIA|p.C215Vfs*23|1|0.14|ENSG00000100906|chr14:35402658-35402658|G/-|frameshift_variant;;ENSG00000069399|ENST00000164227|BCL3;;ENSG00000077150|ENST00000661543|NFKB2;;ENSG00000100906|ENST00000216797|NFKBIA;;ENST00000557459.1_1_14:35872311-35873850:-|nuORF;;nc|ENSG00000109320|P19838|NFKB1;;nc|ENSG00000077150|Q00653-4|NFKB2;;ENST00000403534.7_1_19:45250964-45261799:+|nuORF -0.280118465423584 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16793 81.057 288.0 445870.0 25 0 22975.0 + 37159 TIAQGGVLPNI 11 103 1082.6195794907662 1081.6123030241663 1 1082.622729480267 MULTI CID FTMS 0 0 0 16779 284063.46875 0.6600338932420239 1 -0.0479736328125 14 Unmodified _TIAQGGVLPNI_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000454426.1_1_6:25882256-25882391:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 63.22749603027936 0.0560465731344335 3 [PS]AAAKT{I|L}GAVP 12 10 + 76.303 0.0 0.0 7.0546 7.0546 82.792 0.0 0.0 0.0 7.447274948966935 24.63807913561952 7.447274948966935 2.3415325528390127 0 0.9247425010840048 0.0 1.0 0.555462187404089 [PS]AAAKT{I|L}GAVP;[PS]AAKAT{I|L}GAVP;[PS]AAAKT{I|L}QVP;[PS]AAKAT{I|L}QVP;[PS]AAAKT{I|L}G[PG]{I|L};[TP]GAAKT{I|L}GAVP;[PS]AAKAT{I|L}G[PG]{I|L};[TP]GAKAT{I|L}GAVP;[PS]AAAKT{I|L}[NP]{I|L};[TP]GAAKT{I|L}QVP 7.0546;6.8381;6.7216;6.5051;6.1771;6.0917;5.9606;5.8753;5.8441;5.7588 -;-;-;-;-;-;-;-;-;- 10244 1 1.055 84146.6 1.0 11115 5676 16779 HBL1_DMSO_200M_050219_1,16793 HBL1_DMSO_200M_050219_1,16793,TIAQGGVLPNI True True TIAQGGVLPNI 81.056603 1082.62272948027 4793568.5 16779.0 ENSG00000196747|ENST00000358739|H2AC13;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000276903|ENST00000613174|H2AC16;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000274997|ENST00000377459|H2AC12;;ENST00000454426.1_1_6:25882256-25882391:-|nuORF;;ENSG00000184270|ENST00000331128|H2AC21;;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;;ENSG00000180573|ENST00000377791|H2AC6;;nc|ENSG00000246705|Q9BTM1-2|H2AJ;;ENSG00000246705|ENST00000544848|H2AJ 4.61396853129069 1.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16794 81.062 268.0 300650.0 25 0 23683.0 + 15290 IPIQINVGTTV 11 119 577.8424117855567 1153.6702706379133 2 578.3159057497978 MULTI CID FTMS 0 0 0 16779 174210.546875 0.1512159993463906 -6 0.2137222290039062 15 Unmodified _IPIQINVGTTV_ ENSG00000204463|ENST00000676615|BAG6;ENST00000469182.1_1_6:31610750-31613330:-|nuORF;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 27.628801355627647 0.4434699450731472 3 [{I|L}V][RH]DGTY 8 8 28.849 0.0 0.0 2.5007 0.0 0.0 0.0 209.18312399168204 209.18312399168204 -2.9318250140072166 0.0 -2.9318250140072166 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}V][RH]DGTY 2.5007 - 663 1 1.055 67127.0 1.0 11116 5676 16779 HBL1_DMSO_200M_050219_1,16794 HBL1_DMSO_200M_050219_1,16794,IPIQINVGTTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16796 81.066 8.0 6021800.0 25 0 394440.0 + 4263 DAPVALVVHM 10 79 526.2840515947472 1050.5535502562943 2 526.2842285037041 MULTI CID FTMS 0 0 0 16795 4344161.5 0.4586752548937003 6 -0.4282150268554687 1 Unmodified _DAPVALVVHM_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 44.40701690623563 0.1129771813061863 3 {[DA]|[EG]}PVA{I|L}VV[HM] 10 0 + 63.237 0.0 0.0 6.0194 6.0194 91.36 0.0 0.0 0.0 19.916892907146178 7.269987279362624 7.269987279362624 29.30645977579189 0 0.6861818737241735 1.3979400086720375 0.0 0.0 + + {[DA]|[EG]}PVA{I|L}VV[HM];{I|L}{I|L}G[WQ]AV[HQ];[Q{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}AV[HQ];[KA][PA]{[ET]|[MV]}AV[HQ] 6.0194;3.2298;1.2506;0.087595 +;-;-;- + 227 + 1 1.055 44424.4 1.0 11117 5677 16795 HBL1_DMSO_200M_050219_1,16796 HBL1_DMSO_200M_050219_1,16796,DAPVALVVHM True True DAPVALVVHM 81.065636 526.284228503704 227807808.0 16795.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 7.727513790130615 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16797 81.067 11.0 3502300.0 25 0 314360.0 + 19032 LDLLVTGTQL 10 77 536.8165124680247 1071.618472002849 2 536.8169433474541 MULTI CID FTMS 0 0 0 16795 3273099.75 0.3639122712414667 5 -0.34124755859375 2 Unmodified _LDLLVTGTQL_ REV__ENSG00000188687|ENST00000394019|SLC4A5;REV__ENST00000451608.2_1_2:74452054-74542150:-|nuORF;REV__ENST00000483195.5_1_2:74452054-74512997:-|nuORF;REV__nc|ENSG00000188687|Q9BY07-2|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-4|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-5|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-6|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-7|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5;REV__nc|ENSG00000188687|Q9BY07|SLC4A5 24.020572477871973 0.4289996903560794 3 {[QN]|[E{I|L}]|[KN]}VK{I|L}E[WR] 8 -1 + 30.635 0.0 0.0 2.8587 2.8587 76.889 0.0 0.0 0.0 6.989700043360188 15.150312510170778 6.989700043360188 7.7815125038364386 0 0.0 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}VK{I|L}E[WR];{[QN]|[E{I|L}]|[KN]}V{I|L}KE[WR];{[QN]|[E{I|L}]|[KN]}VK{I|L}[DP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}VE[K{I|L}][WR];{[QN]|[E{I|L}]|[KN]}V{I|L}K[DP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[TV]|[{I|L}S]}[R{I|L}]{I|L}E[WR] 2.8587;2.1326;1.5492;1.109;0.82305;0.76562 -;-;-;-;-;- 179 1 1.055 36377.4 1.0 11118 5677 16795 HBL1_DMSO_200M_050219_1,16797 HBL1_DMSO_200M_050219_1,16797,LDLLVTGTQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16798 81.068 62.0 1778900.0 25 0 299730.0 + 18599 LADTASFCI 9 98 470.7265013201815 939.438449707163 2 470.7260619997978 MULTI CID FTMS 0 0 0 -1 0 3 Unmodified _LADTASFCI_ REV__ENSG00000112494|ENST00000230256|UNC93A;REV__nc|ENSG00000112494|Q86WB7-2|UNC93A 23.1484247019978 0.2366544122328345 3 {I|L}A 2 -1 42.519 0.0 0.0 4.526 0.0 0.0 0.0 752.2950430189974 752.2950430189974 25.04432191740108 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {I|L}A 4.526 + + 118 + 1 1.055 89988.8 1.0 11119 5677 16795 HBL1_DMSO_200M_050219_1,16798 HBL1_DMSO_200M_050219_1,16798,LADTASFCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16799 81.07 36.0 1106000.0 25 0 134990.0 + 21368 LPFQKGYLV 9 72 532.8108539223938 1063.6071549115877 2 532.8109619021416 MULTI CID FTMS 0 0 0 16795 1137056.875 0.4013073689511984 5 -0.34124755859375 4 Unmodified _LPFQKGYLV_ ENSG00000075089|ENST00000188312|ACTR6;ENST00000550813.5_1_12:100594629-100599999:+|nuORF;nc|ENSG00000075089|Q9GZN1-2|ACTR6 34.10243960390752 0.1078313939113124 3 {I|L}P{M(Oxidation (M))|F}Q 4 5 44.641 0.0 0.0 4.1972 0.0 0.0 0.0 575.3221529596311 575.3221529596311 23.1259189508755 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + {I|L}P{M(Oxidation (M))|F}Q 4.1972 + + 140 + 1 1.055 40694.7 1.0 11120 5677 16795 HBL1_DMSO_200M_050219_1,16799 HBL1_DMSO_200M_050219_1,16799,LPFQKGYLV True True LPFQKGYLV 81.069511 532.810961902142 58096724.0 16795.0 ENST00000550813.5_1_12:100594629-100599999:+|nuORF;;nc|ENSG00000075089|Q9GZN1-2|ACTR6;;ENSG00000075089|ENST00000188312|ACTR6 7.598817189534505 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16800 81.071 41.0 1224500.0 25 0 161970.0 + 36635 TATMHILVV 9 76 492.7810336491686 983.5475143651372 2 492.7813598513603 MULTI CID FTMS 0 0 0 16795 1028414.9375 0.3648490363250827 -3 0.1418991088867187 5 Unmodified _TATMHILVV_ ENSG00000164880|ENST00000404767|INTS1;ENST00000468115.1_1_7:1523234-1533501:-|nuORF 44.40701690623563 0.0526327925666318 3 [HM]T[TA]{I|L}{I|L}VV 9 4 + 41.461 0.0 0.0 4.2155 4.2155 76.096 0.0 0.0 0.0 4.762036441594191 17.816206019771528 4.762036441594191 3.807196863200837 0 0.6989700043360187 0.0 1.610924374808178 0.0 [HM]T[TA]{I|L}{I|L}VV;[HM]T{I|L}[TA]{I|L}VV;[HM]T{I|L}{I|L}[TA]VV;[H{I|L}][MT][TA]{I|L}VV;[H{I|L}][MT]{I|L}[TA]VV;[H{I|L}]{I|L}[MT][TA]VV 4.2155;3.8284;3.4413;1.6472;1.2601;0.954 -;-;-;-;-;- 209 1 1.055 43530.8 1.0 11121 5677 16795 HBL1_DMSO_200M_050219_1,16800 HBL1_DMSO_200M_050219_1,16800,TATMHILVV True True TATMHILVV 81.07069 492.78135985136 47191296.0 16795.0 ENST00000468115.1_1_7:1523234-1533501:-|nuORF;;ENSG00000164880|ENST00000404767|INTS1 6.289433161417644 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16801 81.072 52.0 1200500.0 25 0 231300.0 1617 ALLTFDTGC 9 69 314.1533594121321 939.4382488365964 3 314.1528503298759 MULTI CID FTMS 0 0 0 16795 996610.1875 0.3601470232974725 7 -0.5242691040039062 6 Unmodified _ALLTFDTGC_ ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF 23.1484247019978 0.2366544122328345 3 A{I|L}{I|L}[DN]V 6 5 52.638 0.0 0.0 5.6031 0.0 0.0 0.0 311.09113489322505 311.09113489322505 45.19077524932108 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.75 0.0 A{I|L}{I|L}[DN]V 5.6031 - 39 + 1 1.055 56287.9 1.0 11122 5677 16795 HBL1_DMSO_200M_050219_1,16801 HBL1_DMSO_200M_050219_1,16801,ALLTFDTGC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16802 81.076 234.0 1140300.0 25 0 141490.0 + -1 GVLGMCRR 8 137 316.8326148258719 947.4760150778156 3 316.8323547244072 MULTI CID FTMS 0 0 0 16795 854819.125 0.4289439217169767 7 -0.5242691040039062 7 Carbamidomethyl (C) _GVLGMC(Carbamidomethyl (C))RR_ REV__ENST00000556125.5_1_14:69864828-69908619:+|nuORF 25.399314129420983 0.5099049743284904 3 GVVKV 5 -1 63.065 0.0 0.0 6.6561 0.0 0.0 0.0 462.1309137426797 462.1309137426797 40.54211136551635 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.6382104921644451 GVVKV 6.6561 - 446 + 1 1.055 214330.7 1.0 11123 5677 16795 HBL1_DMSO_200M_050219_1,16802 HBL1_DMSO_200M_050219_1,16802,GVLGMCRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16803 81.078 85.0 1321900.0 25 0 200790.0 + 13213 HGMIMLRI 8 106 485.76934583357854 969.5241387339572 2 485.7697021365166 MULTI CID FTMS 0 0 0 16795 873255.125 0.1175244397585975 8 -0.5940017700195312 8 Unmodified _HGMIMLRI_ ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1 56.541270873467816 0.1144128637334507 3 HGM{I|L}M[R{I|L}]{I|L} 8 0 + 60.844 0.0 0.0 6.2757 6.2757 81.234 0.0 0.0 0.0 34.64632226744975 2.65153777800478 2.65153777800478 2.998037644757048 0 1.7302046884880935 1.0457574905606752 0.0 0.0 + + HGM{I|L}M[R{I|L}]{I|L};HGM{I|L}{I|L}{[WT]|[RM]}{I|L};HG{I|L}MM[R{I|L}]{I|L};HG{I|L}M{I|L}{[WT]|[RM]}{I|L};{I|L}HGMM[R{I|L}]{I|L};{I|L}HGM{I|L}{[WT]|[RM]}{I|L};H{I|L}GMM[R{I|L}]{I|L};H{I|L}GM{I|L}{[WT]|[RM]}{I|L} 6.2757;5.9664;5.5725;5.2633;4.2886;3.9794;3.9782;3.6689 +;-;-;-;-;-;-;- + 178 + 1 1.055 89800.3 1.0 11124 5677 16795 HBL1_DMSO_200M_050219_1,16803 HBL1_DMSO_200M_050219_1,16803,HGMIMLRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16804 81.083 269.0 615220.0 25 0 93361.0 + 30832 RIKDEFQLL 9 142 387.8923982767913 1160.655365430574 3 387.8922302126884 MULTI CID FTMS 0 0 0 16795 686845.4375 0.5861044181161953 5 -0.34124755859375 9 Unmodified _RIKDEFQLL_ ENSG00000104964|ENST00000327141|TLE5;ENST00000585782.1_1_19:3057505-3062198:-|nuORF;ENST00000586003.1_1_19:3061156-3062198:-|nuORF;nc|ENSG00000104964|Q08117-2|TLE5 51.629811660486645 0.0367964933207742 3 [R{I|L}]KDEQ{M(Oxidation (M))|F}{I|L}{I|L} 9 2 + 57.349 0.0 0.0 4.941 4.941 74.519 0.0 0.0 0.0 16.008209192124127 37.54139959590981 16.008209192124127 1.4608280609188284 0 0.2887254899964357 0.8860566476931632 0.805462187404089 0.8494850021680094 [R{I|L}]KDEQ{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}Q{I|L}{I|L};[R{I|L}]KDQE{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KD{M(Oxidation (M))|F}EQ{I|L}{I|L};[R{I|L}]KDEQ{I|L}{M(Oxidation (M))|F}{I|L};[R{I|L}]KDE[AG]{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}[AG]{I|L}{I|L};[R{I|L}]KDE{I|L}Q{M(Oxidation (M))|F}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}{I|L}Q{I|L};[R{I|L}]KDE{I|L}{M(Oxidation (M))|F}Q{I|L} 4.941;4.8152;4.53;4.2816;4.1549;4.1477;4.0218;3.9835;3.7966;3.751 -;+;-;-;-;-;-;-;-;- + 1904 1 1.055 130773.5 1.0 11125 5677 16795 HBL1_DMSO_200M_050219_1,16804 HBL1_DMSO_200M_050219_1,16804,RIKDEFQLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16805 81.089 287.0 839110.0 25 0 103540.0 + 38747 TVANQAIWL 9 231 508.2832918365119 1014.5520307398236 2 508.2831909060478 MULTI CID FTMS 0 0 0 16795 382373.96875 1.0 0 0.0 10 Unmodified _TVANQAIWL_ ENST00000446936.6_1_3:128889931-128890333:-|nuORF;ENST00000451728.6_2_3:128889931-128890333:-|nuORF 30.63653989081413 0.1413794767160703 3 {[QG]|[NA]}[{I|L}A]SG{I|L}AW{I|L} 10 6 + 24.081 0.0 0.0 2.3735 2.3735 72.397 0.0 0.0 0.0 4.695222426932901 5.028716860465842 4.695222426932901 3.979400086720375 0 0.9291746928241124 1.0969100130080565 0.5242275032520141 0.4308845489566889 {[QG]|[NA]}[{I|L}A]SG{I|L}AW{I|L};{[QG]|[NA]}[{I|L}A]SGA{I|L}W{I|L};{[QG]|[NA]}[{I|L}A]SQ{I|L}W{I|L};{[TV]|[{I|L}S]}P{[ES]|[DT]|[{I|L}C]}{I|L}AW{I|L};[TA]Q{[NV]|[RG]}{I|L}AW{I|L};[{I|L}A][KQ]ADAW{I|L};{[TV]|[{I|L}S]}P{[WT]|[RM]}{I|L}W{I|L};{[TV]|[{I|L}S]}P[{I|L}T]DAW{I|L};[VP]T{[ES]|[DT]|[{I|L}C]}{I|L}AW{I|L};[{I|L}A][KQ]WAW{I|L} 2.3735;1.9813;1.924;1.8643;1.7831;1.7155;1.7047;1.6839;1.6255;1.5737 -;-;-;-;-;-;-;-;-;- 2343 1 1.055 182923.4 1.0 11126 5677 16795 HBL1_DMSO_200M_050219_1,16805 HBL1_DMSO_200M_050219_1,16805,TVANQAIWL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16806 81.094 276.0 297500.0 25 0 19250.0 -1 PFVCSENGCLS 11 135 635.2666998449819 1268.5188467567637 2 635.2671996951103 MULTI CID FTMS 0 0 0 16795 302146.59375 0.5236622868779653 1 -0.037872314453125 11 2 Carbamidomethyl (C) _PFVC(Carbamidomethyl (C))SENGC(Carbamidomethyl (C))LS_ ENSG00000165244|ENST00000375256|ZNF367;nc|ENSG00000165244|Q7RTV3-2|ZNF367 6.2057823575117 0.8458686499021061 3 QT{I|L}[C(Carbamidomethyl (C))S]PPTV 9 -1 24.228 0.0 0.0 1.9099 0.0 0.0 267.0198651234673 0.0 267.0198651234673 0.0 6.716430671353976 0.0 0.0 0 0.0 0.0 0.6382104921644451 0.0 QT{I|L}[C(Carbamidomethyl (C))S]PPTV 1.9099 - 943 + 1 1.055 65081.4 1.0 11127 5677 16795 HBL1_DMSO_200M_050219_1,16806 HBL1_DMSO_200M_050219_1,16806,PFVCSENGCLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16807 81.099 316.0 407510.0 25 0 54526.0 -1 0 93 1082.7203979304709 5408.565607319353 5 1083.317431628704 MULTI CID FTMS 0 0 0 16795 280916.0 0.937053731791986 -3 0.1418991088867187 12 3 [PS]AAAAAA 8 -1 39.698 0.0 0.0 0.73398 0.0 0.0 0.0 4795.244407173923 4795.244407173923 22.684465535402296 0.0 0.0 0.0 0 1.4291746928241125 0.0 0.0 0.0 [PS]AAAAAA 0.73398 - 598 + 1 1.055 90771.6 1.0 11128 5677 16795 HBL1_DMSO_200M_050219_1,16807 HBL1_DMSO_200M_050219_1,16807, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16809 81.104 11.0 5334100.0 25 0 1042000.0 + 6559 EALPVKLI 8 71 441.786492076808 881.5584312204161 2 441.7867004275322 MULTI CID FTMS 0 0 0 16808 5109887.5 0.9608868146314504 1 -0.0725860595703125 1 Unmodified _EALPVKLI_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;nc|ENSG00000171848|P31350-2|RRM2 53.57557251787612 0.1224291679108181 3 {[CP]|[EA]}{I|L}PVK{I|L}{I|L} 8 0 + 42.63 0.0 0.0 4.8357 4.8357 87.757 0.0 0.0 0.0 19.442059438411903 12.5190243216651 12.5190243216651 42.62964706465603 0 0.8807196863200843 0.0 0.0 0.0 + + {[CP]|[EA]}{I|L}PVK{I|L}{I|L} 4.8357 + + 79 + 1 1.026 53204.7 1.0 11129 5678 16808 HBL1_DMSO_200M_050219_1,16809 HBL1_DMSO_200M_050219_1,16809,EALPVKLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16810 81.106 135.0 502330.0 25 0 143140.0 + 43296 WKIRLHGFPSL 11 87 677.3950112965572 1352.7754696599145 2 677.3956786990166 MULTI CID FTMS 0 0 0 16808 1069268.75 0.5332502905427531 6 -0.4863967895507812 2 Unmodified _WKIRLHGFPSL_ REV__ENST00000590121.1_1_19:12918336-12918396:+|nuORF 5.296884461304476 0.8501568894076437 3 {I|L} 1 -1 9.3323 0.0 0.0 0.68986 0.0 0.0 1221.680664827686 0.0 1221.680664827686 0.0 0.1241179186251617 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.68986 + + 19 + 1 1.026 68415.1 1.0 11130 5678 16808 HBL1_DMSO_200M_050219_1,16810 HBL1_DMSO_200M_050219_1,16810,WKIRLHGFPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16811 81.107 16.0 2591100.0 25 0 251980.0 21808 LPNIHPELL 9 79 523.3041480219179 1044.5937431106356 2 523.3049194216728 MULTI CID FTMS 0 0 0 16808 3165730.5 0.7781502327736185 7 -0.5561294555664062 3 Unmodified _LPNIHPELL_ ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1 27.628801355627647 0.1796483985696185 3 {I|L}PY{I|L}{I|L}{[QG]|[NA]}E{I|L} 9 5 + 66.987 0.0 0.0 6.4127 6.4127 78.081 0.0 0.0 0.0 39.18753300776284 2.614172158888664 2.614172158888664 0.6066730616973786 0 0.3807196863200844 2.0 0.5 0.0 {I|L}PY{I|L}{I|L}{[QG]|[NA]}E{I|L};{I|L}PY{I|L}P{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};{I|L}PYP{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};{I|L}PYP{[MS]|[{M(Oxidation (M))|F}A]}PK{I|L};{I|L}PY{I|L}P{I|L}{[DS]|[MA]|[CV]|TT}Q;{I|L}PYP{I|L}{I|L}{[DS]|[MA]|[CV]|TT}Q;{I|L}PY{I|L}{I|L}P{[DS]|[MA]|[CV]|TT}Q;{I|L}PY{I|L}{I|L}{[DS]|[MA]|[CV]|TT}PQ;{I|L}PS[KP][YV]E{I|L};[PS]{I|L}[KP][YV]E{I|L} 6.4127;6.3546;6.0665;5.9737;5.8809;5.5927;5.5927;4.9236;4.6177;2.0015 -;-;-;-;-;-;-;-;-;- 489 + 1 1.026 44411.2 1.0 11131 5678 16808 HBL1_DMSO_200M_050219_1,16811 HBL1_DMSO_200M_050219_1,16811,LPNIHPELL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16812 81.109 72.0 1077100.0 25 0 72022.0 + -1 SGGICRAWG 9 95 482.2279910030984 962.4414290729968 2 482.7304260134697 MULTI CID FTMS 0 0 0 16808 1062514.625 0.8957261594172506 5 -0.3903427124023437 4 Carbamidomethyl (C) _SGGIC(Carbamidomethyl (C))RAWG_ REV__ENSG00000162006|ENST00000543963|MSLNL 7.289230182591677 0.6602208344931196 3 [SG]AGA{I|L} 6 -1 20.891 0.0 0.0 2.1706 0.0 0.0 0.0 503.1743907329474 503.1743907329474 8.293037728310251 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [SG]AGA{I|L} 2.1706 - 317 + 1 1.026 63316.3 1.0 11132 5678 16808 HBL1_DMSO_200M_050219_1,16812 HBL1_DMSO_200M_050219_1,16812,SGGICRAWG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16813 81.113 219.0 674140.0 25 0 59139.0 + 34902 SQIEADFRL 9 157 539.7800980862982 1077.5456432393962 2 539.7801391482353 MULTI CID FTMS 0 0 0 16808 690086.6875 0.0268677238981898 21 -1.674163818359375 5 Unmodified _SQIEADFRL_ ENSG00000198900|ENST00000361337|TOP1 47.594388314883695 0.0456443387682827 3 {[QS]|[NT]}{I|L}EAD{I|L}R{M(Oxidation (M))|F} 9 2 + 58.087 0.0 0.0 5.3907 5.3907 79.169 0.0 0.0 0.0 16.355830254716253 3.175990970971739 3.175990970971739 3.175990970971739 0 1.0 0.9208187539523752 0.3807196863200844 0.0 {[QS]|[NT]}{I|L}EAD{I|L}R{M(Oxidation (M))|F};{[QS]|[NT]}{I|L}EAD{M(Oxidation (M))|F}R{I|L};{[QS]|[NT]}{I|L}E{I|L}{[DA]|[EG]}R{M(Oxidation (M))|F};{[QS]|[NT]}{I|L}{I|L}E{[DA]|[EG]}R{M(Oxidation (M))|F} 5.3907;5.096;3.6506;3.3712 -;+;-;- + 593 + 1 1.026 115195.2 1.0 11133 5678 16808 HBL1_DMSO_200M_050219_1,16813 HBL1_DMSO_200M_050219_1,16813,SQIEADFRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16814 81.118 264.0 462400.0 25 0 24745.0 + 15291 VLYTGDFRLA 10 149 577.8424117855567 1153.6702706379133 2 577.8422729372978 MULTI CID FTMS 0 0 0 16808 375943.6875 0.208648159087527 -4 0.1797714233398437 6 Unmodified _IPIQINVGTTV_ nc|ENSG00000152457|Q96SD1-3|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-4|DCLRE1C 39.94969957227396 0.2131707853268865 3 [{I|L}P]Q{I|L}N{I|L}VG 8 5 42.528 0.0 0.0 3.6864 0.0 0.0 0.0 316.14863886613074 316.14863886613074 0.3268114924297407 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.2887254899964357 [{I|L}P]Q{I|L}N{I|L}VG 3.6864 - 4639 1 1.026 99458.7 1.0 11134 5678 16808 HBL1_DMSO_200M_050219_1,16814 HBL1_DMSO_200M_050219_1,16814,IPIQINVGTTV False True VLYTGDFRLA 81.118167 577.842272937298 5338362.5 16808.0 nc|ENSG00000152457|Q96SD1-3|DCLRE1C;;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;;ENSG00000152457|ENST00000378278|DCLRE1C;;nc|ENSG00000152457|Q96SD1-4|DCLRE1C 5.7847215334574384 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16815 81.125 389.0 690800.0 25 0 57850.0 -1 0 173 336.1045918213961 670.1946307095923 2 336.1049072146416 MULTI CID FTMS 0 0 0 -1 0 7 3 {I|L} 1 -1 9.8329 0.0 0.0 1.4672 0.0 0.0 539.0996427718954 0.0 539.0996427718954 0.0 1.2763625255165305 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4672 - 32 + 1 1.026 211857.0 1.0 11135 5678 16808 HBL1_DMSO_200M_050219_1,16815 HBL1_DMSO_200M_050219_1,16815, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16816 81.13 286.0 343450.0 25 0 30612.0 37965 TMLKRELVRWW 11 77 759.4239852761466 0 759.4239379763603 PEAK CID FTMS 0 0 0 16808 310751.5 0.9220150902284396 -1 0.037872314453125 8 Unmodified _TMLKRELVRWW_ ENST00000416284.7_1_12:62148739-62261127:-|nuORF 2.282774691075616 0.4761840153648598 3 {I|L}A{I|L}DV 5 9 30.266 0.0 0.0 1.9953 0.0 0.0 776.4238850036619 226.08413110904533 1002.5080161127072 0.0 0.0 0.0 0.0 0 0.0 0.0 1.8494850021680087 0.0 {I|L}A{I|L}DV 1.9953 - 226 + 1 1.026 73683.5 1.0 11136 5678 16808 HBL1_DMSO_200M_050219_1,16816 HBL1_DMSO_200M_050219_1,16816,TMLKRELVRWW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16817 81.136 304.0 474260.0 25 0 29699.0 + 3338 AYNFPVTAM 9 121 1013.4761882652012 1012.4689117986012 1 1015.484362781048 MULTI CID FTMS 0 0 0 16808 320675.875 0.5078191243241906 -1 0.037872314453125 9 Unmodified _AYNFPVTAM_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 65.23502041540118 0.0231836506122253 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{M(Oxidation (M))|F}VVTAE 9 2 + 67.799 0.0 0.0 6.6964 6.6964 78.033 0.0 0.0 0.0 0.0995558483082845 1.7989247940391095 0.0995558483082845 0.0995558483082845 0 0.6643943297944485 1.0 0.75 1.1593793813122064 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{M(Oxidation (M))|F}VVTAE;[VP]T[HM]TQAE;[VP]TAA[EP]EAE;{M(Oxidation (M))|F}ATVV{M(Oxidation (M))|F}AQM;[VP]T[HM]QTAE;{M(Oxidation (M))|F}ATVV{M(Oxidation (M))|F}S{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]TAM{[HG]|PP}TAE;[VP]TAMNYA{M(Oxidation (M))|F};[VP]TA{M(Oxidation (M))|F}V[HN]E;{M(Oxidation (M))|F}AE{M(Oxidation (M))|F}{[VA]|[{I|L}G]}S{[QD]|[EN]|[WG]|[KD]|[RS]} 6.6964;6.6866;6.6375;6.5188;6.1454;5.9279;5.9137;5.7737;5.7637;5.516 -;-;-;-;-;-;-;-;-;- 6178 1 1.026 93173.5 1.0 11137 5678 16808 HBL1_DMSO_200M_050219_1,16817 HBL1_DMSO_200M_050219_1,16817,AYNFPVTAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16818 81.141 281.0 262840.0 25 0 20212.0 + 38289 TQEEPDSLLEV 11 120 630.3041099431921 1258.593666953184 2 630.3044921755791 MULTI CID FTMS 0 0 0 16808 277934.53125 0.826648537335096 -1 0.037872314453125 10 Unmodified _TQEEPDSLLEV_ chr19:17543433-17546686|45|45.27|0.54|6.38|+|ENST00000599124|NIBAN3,NIBAN3;chr19:17546797-17549455|45|19.44|0.22|6.49|+|ENST00000600519|NIBAN3,NIBAN3;chr19:17546797-17551786|45|44.04|0.49|6.48|+|ENST00000600871|NIBAN3,NIBAN3;chr19:17549527-17553313|46|34.41|0.39|6.48|+|ENST00000601861|NIBAN3,NIBAN3;ENSG00000167483|ENST00000599164|NIBAN3;nc|ENSG00000167483|Q86XR2-2|NIBAN3;nc|ENSG00000167483|Q86XR2-3|NIBAN3;nc|ENSG00000167483|Q86XR2-4|NIBAN3;nc|ENSG00000167483|Q86XR2-5|NIBAN3;nc|ENSG00000167483|Q86XR2-7|NIBAN3;nc|ENSG00000167483|Q86XR2|NIBAN3 39.21299971606389 0.2245192836502623 3 [{M(Oxidation (M))|F}V]{I|L}{I|L}S[DP]EE[NP] 11 10 + 42.354 0.0 0.0 3.3652 3.3652 80.337 0.0 0.0 0.0 4.035532020140671 4.035532020140671 4.035532020140671 9.299697766009558 0 0.3494850021680094 0.6777807052660807 0.8494850021680094 0.2396518287104437 [{M(Oxidation (M))|F}V]{I|L}{I|L}S[DP]EE[NP];[DP]SST[DP]S{I|L}{I|L}EV;[VS][DG]E[DP]S{I|L}{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}{M(Oxidation (M))|F}[HQ]EE[NP];[{M(Oxidation (M))|F}V]{I|L}{M(Oxidation (M))|F}DD{[HG]|PP}NPV;{NN|[MP]|[D{I|L}]|[EV]}V[WQ]EE{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}{M(Oxidation (M))|F}[DN][YN]EV;[{M(Oxidation (M))|F}V]{I|L}[HQ]{M(Oxidation (M))|F}EE[NP];[{M(Oxidation (M))|F}V]{I|L}[HK]{M(Oxidation (M))|F}EE[NP];[{I|L}T]N{[HG]|PP}DD{M(Oxidation (M))|F}{I|L}EV 3.3652;2.6263;2.043;2.0269;2.0021;1.8234;1.8162;1.7877;1.7877;1.7808 -;-;-;-;-;-;-;-;-;- 947 + 1 1.026 65975.4 1.0 11138 5678 16808 HBL1_DMSO_200M_050219_1,16818 HBL1_DMSO_200M_050219_1,16818,TQEEPDSLLEV False True TQEEPDSLLEV 81.141161 630.304492175579 4585703.5 16808.0 chr19:17546797-17549455|45|19.44|0.22|6.49|+|ENST00000600519|NIBAN3,NIBAN3;;chr19:17549527-17553313|46|34.41|0.39|6.48|+|ENST00000601861|NIBAN3,NIBAN3;;nc|ENSG00000167483|Q86XR2-3|NIBAN3;;nc|ENSG00000167483|Q86XR2-5|NIBAN3;;nc|ENSG00000167483|Q86XR2-4|NIBAN3;;chr19:17532388-17537376|29|42.86|0.46|6.53|+|2|NIBAN3,NIBAN3|1;;chr19:17537259-17537376|18|15.44|0.11|7.17|+|2|None,NIBAN3|1;;ENSG00000167483|ENST00000599164|NIBAN3;;chr19:17533925-17537376|28|19.04|0.17|6.8|+|2|TE_info:MER20,MER20_dup15208,hAT-Charlie,DNA,donor,-,17533729,17533925|None,NIBAN3|2;;chr19:17546797-17551786|45|44.04|0.49|6.48|+|ENST00000600871|NIBAN3,NIBAN3;;nc|ENSG00000167483|Q86XR2|NIBAN3;;nc|ENSG00000167483|Q86XR2-2|NIBAN3;;nc|ENSG00000167483|Q86XR2-7|NIBAN3;;chr19:17543433-17546686|45|45.27|0.54|6.38|+|ENST00000599124|NIBAN3,NIBAN3 5.922163486480713 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16819 81.147 328.0 516360.0 25 0 52395.0 31204 RLQELFAV 8 158 488.2860714071832 974.5575898811665 2 488.2855712771416 MULTI CID FTMS 0 0 0 16808 253050.46875 0.7731253325537425 -1 0.037872314453125 11 Unmodified _RLQELFAV_ ENST00000340291.6_1_9:35812160-35812229:-|nuORF 32.30548876998284 0.3644845974844379 3 T{I|L}{M(Oxidation (M))|F}AV 5 4 51.696 0.0 0.0 5.3046 0.0 0.0 425.24055678535314 0.0 425.24055678535314 0.0 23.93121899106852 0.0 0.0 0 1.0994850021680094 0.0 0.7742275032520141 0.0 T{I|L}{M(Oxidation (M))|F}AV 5.3046 - 695 1 1.026 130812.7 1.0 11139 5678 16808 HBL1_DMSO_200M_050219_1,16819 HBL1_DMSO_200M_050219_1,16819,RLQELFAV False True RTPATLFAV 81.147111 488.285571277142 9903848.0 16808.0 ENST00000477642.5_1_2:38525261-38527422:-|nuORF;;nc|ENSG00000119787|Q8NHH9-2|ATL2;;ENSG00000119787|ENST00000378954|ATL2;;nc|ENSG00000119787|Q8NHH9-5|ATL2;;nc|ENSG00000119787|Q8NHH9-3|ATL2;;nc|ENSG00000119787|Q8NHH9-4|ATL2 2.521952211856842 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16820 81.153 297.0 882780.0 25 0 73655.0 17785 KQIKQRERKNN 11 137 721.4212999011148 1440.8280468690295 2 721.4219848513603 MULTI CID FTMS 0 0 0 16808 218534.578125 0.5642998281949854 -2 0.085845947265625 12 Unmodified _KQIKQRERKNN_ ENSG00000011454|ENST00000373647|RABGAP1;nc|ENSG00000188394|Q9Y3P9-2|RABGAP1;nc|ENSG00000188394|Q9Y3P9-3|RABGAP1 5.296884461304476 0.8501568894076437 3 [NP]{I|L}QGV{I|L} 7 9 59.072 0.0 0.0 4.0999 0.0 0.0 0.0 716.3853948517045 716.3853948517045 20.99960463082048 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 1.579689690656103 [NP]{I|L}QGV{I|L} 4.0999 - 3084 1 1.026 188125.7 1.0 11140 5678 16808 HBL1_DMSO_200M_050219_1,16820 HBL1_DMSO_200M_050219_1,16820,KQIKQRERKNN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16821 81.158 308.0 622700.0 25 0 51298.0 + 25279 MYIARQLSF 9 166 564.7966796897239 1127.5788064462477 2 564.7974731326103 MULTI CID FTMS 0 0 0 16808 200862.046875 0.501610438789942 -1 0.037872314453125 13 Unmodified _MYIARQLSF_ ENSG00000064932|ENST00000361757|SBNO2;ENSG00000139697|ENST00000602398|SBNO1;ENST00000592222.5_1_19:1115804-1132196:-|nuORF;nc|ENSG00000064932|Q9Y2G9-3|SBNO2;nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1 93.93812099017352 0.0133843357737428 3 MY{I|L}[TP]AAKS{M(Oxidation (M))|F} 10 5 + 68.94 0.0 0.0 6.114 6.114 79.207 0.0 0.0 0.0 1.834595381166423 3.16006106235318 1.834595381166423 1.834595381166423 0 1.7302046884880935 2.0 0.5189301784845296 0.535666875892183 MY{I|L}[TP]AAKS{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}ARQ{I|L}S{M(Oxidation (M))|F};[{I|L}A]R{[HG]|PP}DA{I|L}E{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}AR[AG]{I|L}S{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[VG][KA]{I|L}S{M(Oxidation (M))|F};[{I|L}A]R{[HG]|PP}W{I|L}E{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}AR[KA]E{M(Oxidation (M))|F};[{I|L}A]RW{[HG]|PP}{I|L}E{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[VG]RRS{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[VG][RK]D{M(Oxidation (M))|F} 6.114;5.9513;5.8338;5.1347;4.8965;4.71;4.6963;4.6732;4.5842;4.4027 -;+;-;-;-;-;-;-;-;- + 3133 + 1 1.026 146320.8 1.0 11141 5678 16808 HBL1_DMSO_200M_050219_1,16821 HBL1_DMSO_200M_050219_1,16821,MYIARQLSF True True MYIARQLSF 81.158196 564.7985 2840605.0 16808.0 ENSG00000064932|ENST00000361757|SBNO2;;ENSG00000139697|ENST00000602398|SBNO1;;nc|ENSG00000139697|A3KN83-4|SBNO1;;nc|ENSG00000064932|Q9Y2G9-3|SBNO2;;nc|ENSG00000139697|A3KN83-3|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1;;ENST00000592222.5_1_19:1115804-1132196:-|nuORF 6.864633083343506 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16822 81.165 313.0 159220.0 25 0 12532.0 + -1 FQVGDGIGMDL 11 90 584.2716238737814 0 583.9427978396416 PEAK CID FTMS 0 0 0 16808 57835.98828125 0.2078113445188493 3 -0.2413101196289062 14 Oxidation (M) _FQVGDGIGM(Oxidation (M))DL_ ENST00000584992.1_1_18:21044583-21047491:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3;ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF 12.240655878213236 0.4295705806160874 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.59919 0.0 0.0 884.3913789958066 132.04599939517814 1016.4373783909848 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.59919 + + 98 + 1 1.026 44761.5 1.0 11142 5678 16808 HBL1_DMSO_200M_050219_1,16822 HBL1_DMSO_200M_050219_1,16822,FQVGDGIGMDL False False FQVGDGIGMDL 81.16509 583.942797839642 2339934.5 16808.0 ENST00000584992.1_1_18:21044583-21047491:+|nuORF;;nc|ENSG00000101782|O14730-2|RIOK3;;ENSG00000101782|ENST00000339486|RIOK3;;ENST00000581302.5_1_18:21033283-21057068:+|nuORF -0.3079983200877905 2.0 True 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16823 81.172 386.0 399380.0 25 0 31871.0 + 974 AFQAEIAQL 9 180 495.7667005644429 989.518848195686 2 495.7674743533134 MULTI CID FTMS 0 0 0 16808 160521.828125 0.7393258512677513 -3 0.1411285400390625 15 Unmodified _AFQAEIAQL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P 24.020572477871973 0.2255576514309169 3 {I|L} 1 8 13.979 0.0 0.0 1.4127 0.0 0.0 858.4237076700985 0.0 858.4237076700985 0.0 -3.0457436512313265 -3.0457436512313265 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4127 + + 1030 + 1 1.026 120292.3 1.0 11143 5678 16808 HBL1_DMSO_200M_050219_1,16823 HBL1_DMSO_200M_050219_1,16823,AFQAEIAQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16825 81.176 1.8 24562000.0 25 0 3253800.0 + 12679 GVLPNIQAV 9 70 455.7712203434208 909.5278877536416 2 455.7715637087822 MULTI CID FTMS 0 0 0 16824 32488968.0 0.4930302519860691 7 -0.5890274047851562 1 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 30.22481116460888 0.1466181017706357 3 [VG]APQA 6 4 32.668 0.0 0.0 3.5918 0.0 0.0 0.0 383.22781386131663 383.22781386131663 16.637663434659583 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.3494850021680094 [VG]APQA 3.5918 - 250 1 1.026 42570.6 1.0 11144 5679 16824 HBL1_DMSO_200M_050219_1,16825 HBL1_DMSO_200M_050219_1,16825,GVLPNIQAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16826 81.177 2.3 17385000.0 25 0 2497900.0 -1 ALMAAPLSL 9 66 451.7527689299804 901.4909849267608 2 451.7530395388603 MULTI CID FTMS 0 0 0 16824 25145842.0 0.3209607500802598 -7 0.29278564453125 2 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 3 [{I|L}A]SMPS{I|L}A{I|L} 9 -1 + 57.062 0.0 0.0 6.3297 6.3297 90.653 0.0 0.0 0.0 18.679767852945936 8.384767769392738 8.384767769392738 13.187587626244124 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A]SMPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};{[TV]|[{I|L}S]}AMPS{I|L}A{I|L};[{I|L}A]S[WE]{I|L}A{I|L};[{I|L}A]SMP[{I|L}A]{[TV]|[{I|L}S]};[{I|L}A][WE][{I|L}A]{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[RD]D{I|L}A{I|L};{[TV]|[{I|L}S]}A[WE]{I|L}A{I|L};{[TV]|[{I|L}S]}AMP[{I|L}A]{[TV]|[{I|L}S]} 6.3297;4.8668;4.3376;4.2576;4.199;4.1676;2.7047;2.2655;2.1269;2.0955 -;-;-;-;-;-;-;-;-;- 108 1 1.026 37115.3 1.0 11145 5679 16824 HBL1_DMSO_200M_050219_1,16826 HBL1_DMSO_200M_050219_1,16826,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16827 81.178 4.7 8008400.0 25 0 791410.0 + 25367 NAYEYFTKI 9 72 574.7844821998283 1147.5544114664565 2 574.7849609255791 MULTI CID FTMS 0 0 0 16824 10797406.0 0.8396346462982501 1 -0.0678558349609375 3 Unmodified _NAYEYFTKI_ ENSG00000030110|ENST00000374467|BAK1;nc|ENSG00000030110|Q16611-2|BAK1 28.49450938151212 0.1686335738423394 3 {[QG]|[NA]}YEY{M(Oxidation (M))|F}TK{I|L} 9 0 + 66.08 0.0 0.0 5.7583 5.7583 91.451 0.0 0.0 0.0 40.39381281052492 7.492049162231567 7.492049162231567 66.08017516893504 0 0.9247425010840048 2.0 0.0 0.0 + + {[QG]|[NA]}YEY{M(Oxidation (M))|F}TK{I|L} 5.7583 + + 60 + 1 1.026 35280.6 1.0 11146 5679 16824 HBL1_DMSO_200M_050219_1,16827 HBL1_DMSO_200M_050219_1,16827,NAYEYFTKI False True NAYEYFTKI 81.178454 574.784960925579 300690912.0 16824.0 nc|ENSG00000030110|Q16611-2|BAK1;;ENSG00000030110|ENST00000374467|BAK1 7.885911623636882 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16828 81.18 13.0 4102100.0 25 0 421490.0 23710 LTTRPSESKT 10 81 560.3015923871525 1118.5886318411049 2 560.3021728396416 MULTI CID FTMS 0 0 0 16824 4847772.0 0.020795472468588 22 -1.7512130737304688 4 Unmodified _LTTRPSESKT_ ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1 13.042465956692816 0.6287021003332052 3 [{I|L}T]C(Carbamidomethyl (C))PV{I|L}T 7 6 44.393 0.0 0.0 3.9687 0.0 0.0 0.0 331.15006917924865 331.15006917924865 25.77942768967432 0.0 0.0 0.0 0 0.0 0.958607314841775 1.5 0.0 [{I|L}T]C(Carbamidomethyl (C))PV{I|L}T 3.9687 - 463 1 1.026 46455.6 1.0 11147 5679 16824 HBL1_DMSO_200M_050219_1,16828 HBL1_DMSO_200M_050219_1,16828,LTTRPSESKT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16829 81.181 15.0 3334300.0 25 0 437260.0 + 38170 TPPVVLRL 8 60 447.7918948082776 893.5692366833551 2 447.7923766970634 MULTI CID FTMS 0 0 0 16824 3102626.75 0.930383610504104 2 -0.1687240600585937 5 Unmodified _TPPVVLRL_ ENSG00000181163|ENST00000296930|NPM1;ENST00000412580.1_1_2:122466160-122466664:-|nuORF;ENST00000434232.1_1_7:36858782-36858980:+|nuORF;ENST00000502784.2_1_5:93019019-93019256:-|nuORF;ENST00000518587.1_1_5:170814889-170819841:+|nuORF;nc|ENSG00000181163|P06748-2|NPM1;nc|ENSG00000181163|P06748-3|NPM1 34.10243960390752 0.3329570729325616 3 TPPVV 5 3 64.949 0.0 0.0 7.2684 0.0 0.0 0.0 397.2586763971313 397.2586763971313 55.25910848916756 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + TPPVV 7.2684 + + 33 + 1 1.026 47275.0 1.0 11148 5679 16824 HBL1_DMSO_200M_050219_1,16829 HBL1_DMSO_200M_050219_1,16829,TPPVVLRL False True TPPVVLRL 81.180811 447.792376697063 56717948.0 16824.0 ENST00000434232.1_1_7:36858782-36858980:+|nuORF;;ENST00000412580.1_1_2:122466160-122466664:-|nuORF;;nc|ENSG00000181163|P06748-2|NPM1;;ENSG00000181163|ENST00000296930|NPM1;;ENST00000518587.1_1_5:170814889-170819841:+|nuORF;;nc|ENSG00000181163|P06748-3|NPM1;;ENST00000502784.2_1_5:93019019-93019256:-|nuORF 3.6831730206807456 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16830 81.182 16.0 4467600.0 25 0 489090.0 + 2862 AVDLTLPKV 9 83 478.2948132439346 954.5750735546692 2 478.2950927615166 MULTI CID FTMS 0 0 0 16824 2829558.25 0.8778744891807183 -2 0.1104583740234375 6 Unmodified _AVDLTLPKV_ ENSG00000196419|ENST00000360079|XRCC6;ENST00000478914.1_1_22:42052971-42057696:+|nuORF;ENST00000518193.1_1_8:63767865-63768189:-|nuORF;nc|ENSG00000196419|P12956-2|XRCC6 32.78568957990786 0.1150597335874693 3 {[VA]|[{I|L}G]}D{I|L}T{I|L}PKV 9 0 + 64.632 0.0 0.0 6.7708 6.7708 83.15 0.0 0.0 0.0 37.95757490560675 9.63156532247897 9.63156532247897 3.0102999566398125 0 0.75 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}D{I|L}T{I|L}PKV;{[VA]|[{I|L}G]}D{I|L}T{I|L}KPV;{[VA]|[{I|L}G]}D{I|L}T[KP]{I|L}V;{[VA]|[{I|L}G]}D{I|L}T[KP]V{I|L} 6.7708;6.4554;4.8766;4.4164 +;-;-;- + 221 + 1 1.026 61357.4 1.0 11149 5679 16824 HBL1_DMSO_200M_050219_1,16830 HBL1_DMSO_200M_050219_1,16830,AVDLTLPKV True True AVDLTLPKV 81.18199 478.295092761517 371953652.0 16824.0 ENSG00000196419|ENST00000360079|XRCC6;;nc|ENSG00000196419|P12956-2|XRCC6;;ENST00000518193.1_1_8:63767865-63768189:-|nuORF;;ENST00000478914.1_1_22:42052971-42057696:+|nuORF 5.503598848978679 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16831 81.183 32.0 1874800.0 25 0 151620.0 30305 QYWHWLRWCW 10 61 782.358193485444 1562.7018340376878 2 782.3577148318291 MULTI CID FTMS 0 0 0 16824 2248628.25 1.0 0 0.0 7 Unmodified _QYWHWLRWCW_ ENST00000513055.1_1_5:92921088-92921313:-|nuORF 1.6526216038709556 0.7189921496796233 3 [HD]EAQQDA{M(Oxidation (M))|F}YQV{I|L} 13 13 + 79.415 0.0 0.0 5.0819 5.0819 81.357 0.0 0.0 0.0 4.018730716276991 62.22384327776166 4.018730716276991 6.141303353600108 0 0.9218851356388092 0.0 1.1237125054200234 0.8494850021680094 [HD]EAQQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QDA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQW{M(Oxidation (M))|F}YQV{I|L};[HD]EA[AG]QDA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQDA{M(Oxidation (M))|F}Y[AG]V{I|L};[HD]EAQ[AG]DA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QW{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS][AG]DA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QDA{M(Oxidation (M))|F}Y[AG]V{I|L};[HD]EAQQW{M(Oxidation (M))|F}Y[AG]V{I|L} 5.0819;4.6889;4.6569;4.5014;4.5014;4.5014;4.2639;4.1084;4.1084;4.0747 -;-;-;-;-;-;-;-;-;- 691 1 1.026 50797.3 1.0 11150 5679 16824 HBL1_DMSO_200M_050219_1,16831 HBL1_DMSO_200M_050219_1,16831,QYWHWLRWCW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16832 81.184 39.0 1508000.0 25 0 130040.0 + -1 VGLIMEKE 8 89 467.7499827380652 933.4854125429304 2 467.7502929568291 MULTI CID FTMS 0 0 0 16824 1496050.5 0.5165061917801125 10 -0.8136520385742188 8 Oxidation (M) _VGLIM(Oxidation (M))EKE_ REV__ENSG00000147041|ENST00000297875|SYTL5;REV__nc|ENSG00000147041|Q8TDW5-2|SYTL5 24.67388899826682 0.525179942228231 3 [VG]N 3 -1 26.471 0.0 0.0 2.8357 0.0 0.0 0.0 660.3174532525999 660.3174532525999 9.106056125004828 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.3054621874040891 [VG]N 2.8357 - 227 + 1 1.026 51289.2 1.0 11151 5679 16824 HBL1_DMSO_200M_050219_1,16832 HBL1_DMSO_200M_050219_1,16832,VGLIMEKE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16833 81.186 15.0 2385300.0 25 0 219800.0 + 4443 DAWLRAQVI 9 78 536.3016446335238 0 536.3015624880791 PEAK CID FTMS 0 0 0 16824 1378990.0 1.0 0 0.0 9 Unmodified _DAWLRAQVI_ ENSG00000196116|ENST00000355295|TDRD7;nc|ENSG00000196116|Q8NHU6-2|TDRD7 30.63653989081413 0.1077493867305487 3 W{I|L} 2 7 16.86 0.0 0.0 1.5749 0.0 0.0 186.06427451919745 582.3354586236936 768.3997331428911 0.0 0.0 0.0 0.0 0 0.7396518287104438 0.0 0.0 0.0 + W{I|L} 1.5749 + + 48 + 1 1.026 34531.8 1.0 11152 5679 16824 HBL1_DMSO_200M_050219_1,16833 HBL1_DMSO_200M_050219_1,16833,DAWLRAQVI True True DAWLRAQVI 81.18554 536.301562488079 14361542.0 16824.0 ENSG00000196116|ENST00000355295|TDRD7;;nc|ENSG00000196116|Q8NHU6-2|TDRD7 3.62484347820282 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16834 81.187 50.0 1348900.0 25 0 189250.0 + 4633 DAYVLPKL 8 77 459.7681889261383 917.5218249190766 2 459.7684203982353 MULTI CID FTMS 0 0 0 16824 1345315.5 0.0295599258244032 19 -1.5369415283203125 10 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 39.957323273325 0.2350051964751539 3 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 + 63.409 0.0 0.0 6.9109 6.9109 92.007 0.0 0.0 0.0 23.97940008672037 11.54901959985743 11.54901959985743 11.54901959985743 0 0.8494850021680094 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L};{[DA]|[EG]}YV{I|L}{I|L}[KP] 6.9109;5.6522 +;- + 70 + 1 1.026 56315.6 1.0 11153 5679 16824 HBL1_DMSO_200M_050219_1,16834 HBL1_DMSO_200M_050219_1,16834,DAYVLPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16835 81.189 102.0 875550.0 25 0 65024.0 + 4062 DAMFPVTHI 9 116 515.7547642828263 1029.4949756324525 2 515.7552978396416 MULTI CID FTMS 0 0 0 16824 738295.4375 0.3781146606632975 10 -0.8136520385742188 11 Unmodified _DAMFPVTHI_ ENSG00000188191|ENST00000537384|PRKAR1B 36.506200033944 0.094635877243972 3 {[DA]|[EG]}M{M(Oxidation (M))|F}PVTH{I|L} 9 0 {[DA]|[EG]}M + + 38.894 25.686 8.1003 3.7779 3.7779 51.966 0.0 0.0 0.0 0.0 13.207384919879672 0.0 0.0 0 0.4247425010840047 0.0 0.7302046884880937 0.0 + + {[DA]|[EG]}M{M(Oxidation (M))|F}PVTH{I|L} 3.7779 + + 379 + 1 1.026 72628.9 1.0 11154 5679 16824 HBL1_DMSO_200M_050219_1,16835 HBL1_DMSO_200M_050219_1,16835,DAMFPVTHI True True DAMFPVTHI 81.189067 515.755297839642 22959230.0 16824.0 ENSG00000188191|ENST00000537384|PRKAR1B 6.9165670077006025 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16836 81.194 258.0 288000.0 25 0 32042.0 10212 FQIQRRKHNI 10 115 670.3877724846369 1338.7609920360735 2 670.3884765505791 MULTI CID FTMS 0 0 0 16824 681041.875 0.3828873242010108 10 -0.8136520385742188 12 Unmodified _FQIQRRKHNI_ ENST00000397786.6_1_17:60059972-60060044:-|nuORF 3.5964929083625545 0.7100006075494749 3 {I|L} 1 9 10.969 0.0 0.0 0.81935 0.0 0.0 1207.6656073698612 0.0 1207.6656073698612 0.0 4.737015424545097 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.81935 + + 172 + 1 1.026 63488.1 1.0 11155 5679 16824 HBL1_DMSO_200M_050219_1,16836 HBL1_DMSO_200M_050219_1,16836,FQIQRRKHNI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16837 81.195 58.0 779740.0 25 0 95858.0 + 43894 YFTSYFYL 8 72 552.2576542385987 1102.5007555439972 2 552.2582275271416 MULTI CID FTMS 0 0 0 16824 518118.25 0.5120684493099062 -2 0.1104583740234375 13 Unmodified _YFTSYFYL_ REV__L1M4_dup669|chr1:145841513-145841995:-|1.2195502478143547|0.3377737044666122|1.85|48.0|9|2|sense 28.17323086031832 0.4514957916281387 3 [NP]A{[YD]|[{M(Oxidation (M))|F}M]}T{M(Oxidation (M))|F}Y{I|L} 9 -1 + 33.719 0.0 0.0 3.0584 3.0584 82.158 0.0 0.0 0.0 4.550143450894815 3.3645181798936434 3.3645181798936434 22.34636880228202 0 0.7742275032520141 0.0 0.7614393726401688 0.0 [NP]A{[YD]|[{M(Oxidation (M))|F}M]}T{M(Oxidation (M))|F}Y{I|L};[{I|L}P][VS]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 3.0584;1.0315 -;- 136 1 1.026 42760.9 1.0 11156 5679 16824 HBL1_DMSO_200M_050219_1,16837 HBL1_DMSO_200M_050219_1,16837,YFTSYFYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16838 81.201 315.0 4739000.0 25 0 2162400.0 + 32586 SAVGGGASI 9 130 718.3759106135002 717.3686341469001 1 718.3773071169853 MULTI CID FTMS 0 0 0 16824 437931.25 0.3661180617233596 -7 0.29278564453125 14 Unmodified _SAVGGGASI_ REV__ENSG00000276644|ENST00000613252|DACH1;REV__nc|ENSG00000276644|Q9UI36-3|DACH1;REV__nc|ENSG00000276644|Q9UI36-4|DACH1;REV__nc|ENSG00000276644|Q9UI36|DACH1 48.345845343767074 0.0439967357579942 3 PPS{M(Oxidation (M))|F}AS{I|L} 7 -1 + 73.859 0.0 0.0 10.296 10.296 86.904 0.0 0.0 0.0 2.298870853392586 2.298870853392586 2.298870853392586 2.298870853392586 0 2.3807196863200843 1.5228787452803376 1.2973074971914091 0.0 PPS{M(Oxidation (M))|F}AS{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPAS{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L};{[HG]|PP}S{M(Oxidation (M))|F}AS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAPS{I|L};[PS]{M(Oxidation (M))|F}APS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}APPS{I|L};{[TV]|[{I|L}S]}MPAS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASP{I|L} 10.296;9.9753;9.9501;9.6722;9.6408;8.9543;8.6765;8.2045;8.1422;7.6971 -;-;-;-;-;-;-;-;-;- 1543 + 1 1.026 1019788.9 1.0 11157 5679 16824 HBL1_DMSO_200M_050219_1,16838 HBL1_DMSO_200M_050219_1,16838,SAVGGGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16839 81.207 325.0 397540.0 25 0 44004.0 34431 SLVYIRPCVTL 11 123 632.3618154390267 1262.709077944853 2 632.3612548708916 MULTI CID FTMS 0 0 0 16824 347700.375 0.3111261016800523 -3 0.1584320068359375 15 Unmodified _SLVYIRPCVTL_ ENSG00000176567|ENST00000320048|OR4X1 17.11289562659939 0.6791789249425932 3 {[TV]|[{I|L}S]}S{M(Oxidation (M))|F} 4 9 20.244 0.0 0.0 1.6032 0.0 0.0 0.0 825.4698373251746 825.4698373251746 8.254092551055749 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.7134679910804405 0.0 {[TV]|[{I|L}S]}S{M(Oxidation (M))|F} 1.6032 - 349 1 1.026 100953.5 1.0 11158 5679 16824 HBL1_DMSO_200M_050219_1,16839 HBL1_DMSO_200M_050219_1,16839,SLVYIRPCVTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16840 81.213 328.0 654110.0 25 0 58761.0 + 2370 AQLTHDELIQL 11 143 640.8462990132938 1279.6780450933877 2 640.8463012576103 MULTI CID FTMS 0 0 0 16824 364768.5625 0.5607604316213588 4 -0.3177566528320312 16 Unmodified _AQLTHDELIQL_ ENSG00000156675|ENST00000330843|RAB11FIP1;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;ENST00000523182.5_1_8:37720415-37730726:-|nuORF;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1 42.312485326615175 0.1767732348921932 3 [NP]{I|L}QA{[QG]|[NA]}QA{I|L}Q{I|L} 12 8 + 63.681 0.0 0.0 4.9763 4.9763 76.771 0.0 0.0 0.0 9.541652122422803 2.4209736529099857 2.4209736529099857 2.900346113625183 0 0.4802046884880938 1.0 0.0 1.3807196863200843 [NP]{I|L}QA{[QG]|[NA]}QA{I|L}Q{I|L};[NP]{I|L}AGA{[QG]|[NA]}QA{I|L}Q{I|L};[NP]{I|L}QAVG{I|L}{I|L}Q{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}QNG{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}Q{I|L};[NP]{I|L}AGAVG{I|L}{I|L}Q{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}AGNG{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}Q{I|L};[NP]{I|L}QA{[QG]|[NA]}[AG]A{I|L}Q{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PQA{[QG]|[NA]}QA{I|L}Q{I|L};[AG]VPQA{[QG]|[NA]}QA{I|L}Q{I|L};[NP]{I|L}QQQQA{I|L}Q{I|L} 4.9763;4.7497;4.5856;4.5006;4.359;4.2716;4.2654;4.2307;4.221;4.1277 -;-;-;-;-;-;-;-;-;- 16295 1 1.026 167329.0 1.0 11159 5679 16824 HBL1_DMSO_200M_050219_1,16840 HBL1_DMSO_200M_050219_1,16840,AQLTHDELIQL False True AQLTHDELIQL 81.212983 640.84630125761 13294772.0 16824.0 nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;;ENST00000523182.5_1_8:37720415-37730726:-|nuORF;;ENSG00000156675|ENST00000330843|RAB11FIP1 3.539961338043213 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16841 81.219 345.0 334910.0 25 0 26662.0 37567 TLIHTATMQV 10 143 557.7998926096745 1113.585232286149 2 557.8000366091728 MULTI CID FTMS 0 0 0 16824 311329.1875 0.684825084069081 -1 0.0725860595703125 17 Unmodified _TLIHTATMQV_ ENST00000484556.1_1_6:30866836-30867070:+|nuORF 25.399314129420983 0.3980215340001851 3 {I|L}PW[C(Carbamidomethyl (C))M]V{I|L}E 8 9 51.993 0.0 0.0 4.6689 0.0 0.0 0.0 82.06708704166249 82.06708704166249 21.486614392366263 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.7658715643802767 0.0 {I|L}PW[C(Carbamidomethyl (C))M]V{I|L}E 4.6689 - 939 + 1 1.026 91161.9 1.0 11160 5679 16824 HBL1_DMSO_200M_050219_1,16841 HBL1_DMSO_200M_050219_1,16841,TLIHTATMQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16842 81.225 346.0 355010.0 25 0 39511.0 + 37663 TLMDMRLSQV 10 135 597.3041592192274 1192.5937655052546 2 597.3045532107353 MULTI CID FTMS 0 0 0 16824 297818.125 0.2576656098881163 3 -0.2307891845703125 18 Unmodified _TLMDMRLSQV_ ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6 33.4449034751529 0.2267874087365337 3 [{I|L}T]MDM 5 5 42.971 0.0 0.0 3.6032 0.0 0.0 0.0 598.3335665338499 598.3335665338499 19.527712246842484 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}T]MDM 3.6032 + + 345 + 1 1.026 92336.6 1.0 11161 5679 16824 HBL1_DMSO_200M_050219_1,16842 HBL1_DMSO_200M_050219_1,16842,TLMDMRLSQV False True TLMDMRLSQV 81.22549 597.304553210735 14875512.0 16824.0 nc|ENSG00000101161|O94906-2|PRPF6;;ENSG00000101161|ENST00000266079|PRPF6 5.283392429351807 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16843 81.232 363.0 170640.0 25 0 10926.0 15152 INYHKLRRRG 10 110 656.8879624908211 1311.761372048442 2 656.8871948122978 MULTI CID FTMS 0 0 0 16824 262765.5 0.2436792327176757 -7 0.29278564453125 19 Unmodified _INYHKLRRRG_ ENST00000514473.2_1_14:22849562-22849673:-|nuORF 6.723162845929126 0.6955379296933136 3 {[QV]|[N{I|L}]|[RA]|[KV]}VC 4 8 13.645 0.0 0.0 1.0402 0.0 0.0 0.0 879.5359454115492 879.5359454115492 2.2251792500248726 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}VC 1.0402 - 220 1 1.026 51347.8 1.0 11162 5679 16824 HBL1_DMSO_200M_050219_1,16843 HBL1_DMSO_200M_050219_1,16843,INYHKLRRRG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16844 81.24 368.0 237720.0 25 0 36999.0 + -1 LQARQDILMQK 11 106 680.3747897723853 0 680.3752319216728 PEAK CID FTMS 0 0 0 16824 254714.234375 1.0 0 0.0 20 Oxidation (M) _LQARQDILM(Oxidation (M))QK_ REV__ENSG00000196782|ENST00000509479|MAML3 8.745405648335112 0.4618489994582195 3 {I|L} 1 -1 5.4846 0.0 0.0 0.40365 0.0 0.0 960.5177852559048 282.1105830821039 1242.6283683380088 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.40365 + + 132 + 1 1.026 69362.6 1.0 11163 5679 16824 HBL1_DMSO_200M_050219_1,16844 HBL1_DMSO_200M_050219_1,16844,LQARQDILMQK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16846 81.244 4.2 11705000.0 25 0 1024200.0 + 44933 YPPWPGKIV 9 70 528.7980392882323 1055.5815256432645 2 528.7977172732353 MULTI CID FTMS 0 0 0 16845 12857984.0 0.5146879177241239 -6 0.3202133178710937 1 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 36.04419817259434 0.0971720506436186 3 YPPW 4 5 53.532 0.0 0.0 5.0713 0.0 0.0 0.0 509.3098654395807 509.3098654395807 38.08204932933798 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 + YPPW 5.0713 + + 75 + 1 1.016 48434.7 1.0 11164 5680 16845 HBL1_DMSO_200M_050219_1,16846 HBL1_DMSO_200M_050219_1,16846,YPPWPGKIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16847 81.245 11.0 3624800.0 25 0 269190.0 24658 MLSPPQITI 9 61 500.27895426962647 998.543355606053 2 500.2793762087822 MULTI CID FTMS 0 0 0 16845 2019808.375 0.0942784880608772 11 -0.899017333984375 2 Unmodified _MLSPPQITI_ ENSG00000197283|ENST00000646630|SYNGAP1;nc|ENSG00000197283|Q96PV0-2|SYNGAP1;nc|ENSG00000197283|Q96PV0-3|SYNGAP1;nc|ENSG00000197283|Q96PV0-4|SYNGAP1 19.256988751693697 0.3154191944385105 3 M{I|L}SPD{I|L} 6 4 29.812 0.0 0.0 2.9856 0.0 0.0 0.0 339.2045038335884 339.2045038335884 7.593728280886935 0.0 0.0 0.0 0 0.9177353201839438 1.3979400086720375 0.0 0.0 M{I|L}SPD{I|L} 2.9856 - 81 + 1 1.016 41161.4 1.0 11165 5680 16845 HBL1_DMSO_200M_050219_1,16847 HBL1_DMSO_200M_050219_1,16847,MLSPPQITI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16848 81.246 13.0 5706200.0 25 0 573340.0 + 3561 DAAAFFKSV 9 85 478.2479754454544 954.4813979577089 2 478.2480041384697 MULTI CID FTMS 0 0 0 16845 3209755.75 0.5616853575421228 -2 0.14044189453125 3 Unmodified _DAAAFFKSV_ ENSG00000065923|ENST00000616978|SLC9A7;nc|ENSG00000065923|Q96T83|SLC9A7 29.84058131909904 0.1515068451768857 3 {[DA]|[EG]}AA 4 5 31.643 0.0 0.0 3.3152 0.0 0.0 0.0 623.3191719657743 623.3191719657743 2.2383799697078643 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}AA 3.3152 + + 181 1 1.016 62682.8 1.0 11166 5680 16845 HBL1_DMSO_200M_050219_1,16848 HBL1_DMSO_200M_050219_1,16848,DAAAFFKSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16849 81.247 16.0 2409200.0 25 0 371060.0 + 1699 ALPLSEGTH 9 53 462.7438414389623 923.4731299447244 2 462.7438842654228 MULTI CID FTMS 0 0 0 16845 2053682.125 0.4317872630794603 -6 0.3202133178710937 4 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 11.640296217721598 0.521594087909532 3 [{I|L}A]P 3 -1 34.705 0.0 0.0 3.7581 0.0 0.0 0.0 639.278102066007 639.278102066007 23.111206103324733 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P 3.7581 + + 9 + 1 1.016 37831.7 1.0 11167 5680 16845 HBL1_DMSO_200M_050219_1,16849 HBL1_DMSO_200M_050219_1,16849,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16850 81.249 58.0 1651800.0 25 0 160600.0 27972 PLVTPMVALV 10 97 520.3144726798404 1038.614392426481 2 520.3149291872978 MULTI CID FTMS 0 0 0 16845 1606078.75 1.0 0 0.0 5 Unmodified _PLVTPMVALV_ ENSG00000179094|ENST00000317276|PER1 32.30548876998284 0.2428506522065767 3 {I|L}PPE{I|L}{I|L}MKV 9 8 + 79.835 0.0 0.0 7.6867 7.6867 96.139 0.0 0.0 0.0 33.002669794978274 12.25268461881508 12.25268461881508 31.00833760139686 0 1.3494850021680094 2.0 0.0 0.0 {I|L}PPE{I|L}{I|L}MKV;{I|L}PV[HA]{I|L}YKV;{I|L}V[YR]VYKV;{I|L}VP[HA]{I|L}YKV;{I|L}[{I|L}T]R{M(Oxidation (M))|F}YKV;{I|L}[{I|L}T][VG]{M(Oxidation (M))|F}YKV;{I|L}[{I|L}T]K{I|L}[HD]TV;{I|L}[{I|L}T]KE[HV]TV;{I|L}[{I|L}T]RT[HV]TV 7.6867;4.7012;2.7383;2.4433;1.9124;1.0206;1.0035;1.0035;0.54416 -;-;-;-;-;-;-;-;- 860 + 1 1.016 84262.3 1.0 11168 5680 16845 HBL1_DMSO_200M_050219_1,16850 HBL1_DMSO_200M_050219_1,16850,PLVTPMVALV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16851 81.25 58.0 1775300.0 25 0 142430.0 + 3339 AYNFPVTAM 9 125 507.2420202751992 1012.4694876171984 2 507.2419311404228 MULTI CID FTMS 0 0 0 16845 1050642.75 0.6807103629173725 -1 0.0678558349609375 6 Unmodified _AYNFPVTAM_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 42.09456458481378 0.0639583784996157 3 P{M(Oxidation (M))|F}QAM 5 6 34.68 0.0 0.0 3.4253 0.0 0.0 420.2040590056733 0.0 420.2040590056733 0.0 5.240961569846114 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{M(Oxidation (M))|F}QAM 3.4253 - 761 + 1 1.016 85953.2 1.0 11169 5680 16845 HBL1_DMSO_200M_050219_1,16851 HBL1_DMSO_200M_050219_1,16851,AYNFPVTAM True True AYNFPVTAM 81.250402 507.241931140423 17223178.0 16845.0 nc|ENSG00000141076|Q969X6-3|UTP4;;ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 7.139504432678223 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16852 81.255 245.0 1159700.0 25 0 81065.0 -1 0 152 881.4140406640831 1760.8135283949662 2 881.9139892458916 MULTI CID FTMS 0 0 0 16845 798850.8125 0.02021271319286 -6 0.3202133178710937 7 3 [KT]KY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L} 15 -1 + 86.02 0.0 0.0 4.8853 4.8853 55.238 0.0 0.0 0.0 35.30996112774575 15.18491783126585 15.18491783126585 0.0 0 0.0 0.0 2.2856668758921828 0.9163865622122672 [KT]KY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ADQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQAGA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQAGA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ADAGQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADAGQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ADQAQ[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQAQ[CS]C(Carbamidomethyl (C))V{I|L};[KT]KY{M(Oxidation (M))|F}ADAGAQ[CS]VC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADAGAQ[CS]C(Carbamidomethyl (C))V{I|L} 4.8853;4.8853;4.7209;4.7209;4.6984;4.6984;4.6593;4.6593;4.4724;4.4724 -;-;-;-;-;-;-;-;-;- 113702 + 1 1.016 191804.6 1.0 11170 5680 16845 HBL1_DMSO_200M_050219_1,16852 HBL1_DMSO_200M_050219_1,16852, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16853 81.26 250.0 837210.0 25 0 58112.0 -1 0 139 620.6407649090406 1858.9004653273216 3 620.9752075076103 MULTI CID FTMS 0 0 0 16845 714788.4375 0.2860609514181767 8 -0.6887283325195312 8 3 {M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SHGSAQVK 14 -1 91.595 0.0 0.0 4.9274 0.0 0.0 290.12062583348126 0.0 290.12062583348126 0.0 38.51002754743704 0.0 0.0 0 1.1549471895720984 0.0 1.9049471895720984 0.5629529932484498 {M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SHGSAQVK 4.9274 - 10815 + 1 1.016 157928.3 1.0 11171 5680 16845 HBL1_DMSO_200M_050219_1,16853 HBL1_DMSO_200M_050219_1,16853, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16854 81.265 310.0 579400.0 25 0 76613.0 + 28255 PQVTVDVL 8 145 435.75005791592616 869.4855628986523 2 435.7502319216728 MULTI CID FTMS 0 0 0 16845 640800.9375 0.2102999699220286 8 -0.6887283325195312 9 Unmodified _PQVTVDVL_ ENSG00000187741|ENST00000389301|FANCA;nc|ENSG00000187741|O15360-2|FANCA;nc|ENSG00000187741|O15360-3|FANCA 36.04419817259434 0.3004715606373109 3 [QP]VS{I|L} 5 4 39.155 0.0 0.0 4.5033 0.0 0.0 0.0 342.163378450684 342.163378450684 10.598943791441968 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.9247425010840048 0.3252574989159953 [QP]VS{I|L} 4.5033 - 354 1 1.016 141332.1 1.0 11172 5680 16845 HBL1_DMSO_200M_050219_1,16854 HBL1_DMSO_200M_050219_1,16854,PQVTVDVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16855 81.269 165.0 1065700.0 25 0 140340.0 + 9895 FPFYGKPMRI 10 112 419.2266611861339 1254.6581541586015 3 419.2270385622978 MULTI CID FTMS 0 0 0 16845 515858.0 0.0423789272091085 -12 0.5179901123046875 10 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 41.8396318013385 0.1381409678234242 3 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 69.263 0.0 0.0 5.5204 0.0 0.0 119.07415969062656 0.0 119.07415969062656 0.0 41.55455634180576 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.3807196863200844 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.5204 - 804 1 1.016 144765.7 1.0 11173 5680 16845 HBL1_DMSO_200M_050219_1,16855 HBL1_DMSO_200M_050219_1,16855,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16856 81.274 305.0 558510.0 25 0 89072.0 + 16884 KIFSGVFVKV 10 176 562.346911539554 1122.6792701459078 2 562.8487426638603 MULTI CID FTMS 0 0 0 16845 427584.15625 0.022067363083092 18 -1.469085693359375 11 Unmodified _KIFSGVFVKV_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 55.24861242081279 0.0493457817857391 3 K{I|L}{M(Oxidation (M))|F}S[VG]{M(Oxidation (M))|F}VKV 10 0 + 56.07 0.0 0.0 4.9943 4.9943 78.314 0.0 0.0 0.0 10.620024697117657 3.0444970792913324 3.0444970792913324 3.590219426416681 0 2.086696871556164 0.3979400086720376 0.4247425010840047 0.2396518287104437 + + K{I|L}{M(Oxidation (M))|F}S[VG]{M(Oxidation (M))|F}VKV;K{I|L}{M(Oxidation (M))|F}S[VG]{M(Oxidation (M))|F}VVK;K{I|L}V[YQ]{M(Oxidation (M))|F}VKV;K{I|L}V[YQ]{M(Oxidation (M))|F}VVK;VK{I|L}[YQ]{M(Oxidation (M))|F}VKV;VK{I|L}[YQ]{M(Oxidation (M))|F}VVK;KV{I|L}[YQ]{M(Oxidation (M))|F}VKV;KV{I|L}[YQ]{M(Oxidation (M))|F}VVK;K{I|L}V[RH]VTTAV;K{I|L}{M(Oxidation (M))|F}[{I|L}V][YN]KV 4.9943;4.6745;3.9882;3.6684;3.6553;3.3355;3.2303;2.9105;2.622;2.4936 +;-;-;-;-;-;-;-;-;- + 3055 + 1 1.016 127750.0 1.0 11174 5680 16845 HBL1_DMSO_200M_050219_1,16856 HBL1_DMSO_200M_050219_1,16856,KIFSGVFVKV True True KIFSGVFVKV 81.274112 562.3478 812695132.0 16845.0 ENST00000397415.7_1_6:42848808-42854199:+|nuORF;;ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 4.681192715962728 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16857 81.28 319.0 363860.0 25 0 58959.0 42142 VRYLPRLYLD 10 120 654.3745547642033 1306.7345565952064 2 654.3749267458916 MULTI CID FTMS 0 0 0 16845 386665.625 0.299213720327342 14 -1.182861328125 12 Unmodified _VRYLPRLYLD_ ENSG00000170891|ENST00000307746|CYTL1 3.5964929083625545 0.7100006075494749 3 {I|L} 1 9 10.181 0.0 0.0 0.77912 0.0 0.0 1175.6395076223532 0.0 1175.6395076223532 0.0 5.0924170284700665 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.77912 + + 102 + 1 1.016 101629.9 1.0 11175 5680 16845 HBL1_DMSO_200M_050219_1,16857 HBL1_DMSO_200M_050219_1,16857,VRYLPRLYLD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16858 81.286 353.0 692920.0 25 0 64716.0 + 34991 SQMNAVVYL 9 196 512.7603132730028 0 512.7595092654228 PEAK CID FTMS 0 0 0 16845 375212.875 1.0 0 0.0 13 Unmodified _SQMNAVVYL_ ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1 39.94969957227396 0.061964645358372 3 VV{[C(Carbamidomethyl (C))G]|[NC]}NE 6 8 13.065 0.0 0.0 1.2765 0.0 0.0 294.1556840637806 68.05146967105702 362.2071537348376 0.0 0.0 0.0 0.0 0 0.0 0.0 0.705112052208703 0.9436726795685342 VV{[C(Carbamidomethyl (C))G]|[NC]}NE 1.2765 - 466 + 1 1.016 186687.5 1.0 11176 5680 16845 HBL1_DMSO_200M_050219_1,16858 HBL1_DMSO_200M_050219_1,16858,SQMNAVVYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16859 81.293 361.0 622190.0 25 0 251730.0 -1 0 96 1035.1630235864693 3102.467241359608 3 1035.837084949017 MULTI CID FTMS 0 0 0 16845 309155.6875 0.2457790178023534 4 -0.3459548950195312 14 3 GK{[CT]|[{M(Oxidation (M))|F}G]}HS{M(Oxidation (M))|F}ASAY{[QN]|[E{I|L}]|[KN]} 13 -1 33.013 0.0 0.0 1.0641 0.0 0.0 1689.7951965371456 0.0 1689.7951965371456 0.0 20.70557894690939 0.0 0.0 0 0.5 0.0 1.1861818737241734 0.0 GK{[CT]|[{M(Oxidation (M))|F}G]}HS{M(Oxidation (M))|F}ASAY{[QN]|[E{I|L}]|[KN]} 1.0641 - 1573 + 1 1.016 157402.1 1.0 11177 5680 16845 HBL1_DMSO_200M_050219_1,16859 HBL1_DMSO_200M_050219_1,16859, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16860 81.299 347.0 581370.0 25 0 24974.0 + 3107 AVPDLYFENA 10 219 569.7743475195995 1137.5341421059989 2 569.7736083865166 MULTI CID FTMS 0 0 0 16845 276672.21875 0.1598100101681892 -4 0.226287841796875 15 Unmodified _AVPDLYFENA_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 34.40172386719151 0.2166836008404837 3 [{I|L}P]DY{M(Oxidation (M))|F}EN[Q{I|L}] 9 5 + 49.082 0.0 0.0 4.3148 4.3148 81.003 0.0 0.0 0.0 8.748742803385277 0.2018122933698407 0.2018122933698407 8.748742803385277 0 0.0 1.3010299956639813 0.2396518287104437 0.3252574989159953 [{I|L}P]DY{M(Oxidation (M))|F}EN[Q{I|L}];[DP]{I|L}Y{M(Oxidation (M))|F}EN[Q{I|L}];[{I|L}P]DY{M(Oxidation (M))|F}EGG[Q{I|L}];[DP]Y{I|L}{M(Oxidation (M))|F}EN[Q{I|L}];[{I|L}P]SY{M(Oxidation (M))|F}GEQ[TP];{[VA]|[{I|L}G]}[KC]T{M(Oxidation (M))|F}WVNA;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NE{M(Oxidation (M))|F}WVNA;{NN|[MP]|[D{I|L}]|[EV]}PY{M(Oxidation (M))|F}EN[Q{I|L}];[{I|L}P]DY{M(Oxidation (M))|F}T[KG][TP];[DP]{I|L}Y{M(Oxidation (M))|F}EGG[Q{I|L}] 4.3148;3.5457;3.2194;3.0164;2.944;2.8809;2.5483;2.4884;2.4531;2.4503 -;-;-;-;-;-;-;-;-;- 6421 1 1.016 156332.9 1.0 11178 5680 16845 HBL1_DMSO_200M_050219_1,16860 HBL1_DMSO_200M_050219_1,16860,AVPDLYFENA False True AVPDLYFENA 81.299148 569.773608386517 30632094.0 16845.0 ENSG00000117298|ENST00000374893|ECE1;;nc|ENSG00000117298|P42892-3|ECE1;;nc|ENSG00000117298|P42892-4|ECE1;;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;;nc|ENSG00000117298|P42892-2|ECE1 2.1148310899734497 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16861 81.307 362.0 391610.0 25 0 17453.0 35318 SSSVQVPWER 10 182 587.7980255736354 0 587.7968017458916 PEAK CID FTMS 0 0 0 16845 244497.015625 0.5869170291433667 10 -0.82623291015625 16 Unmodified _SSSVQVPWER_ ENSG00000102385|ENST00000395209|DRP2;nc|ENSG00000102385|Q13474-2|DRP2 15.248480904072842 0.3349989633518451 3 YVVPQ 5 7 21.031 0.0 0.0 1.792 0.0 0.0 423.2209388932835 161.02497278385002 584.2459116771336 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 YVVPQ 1.792 - 552 + 1 1.016 111333.7 1.0 11179 5680 16845 HBL1_DMSO_200M_050219_1,16861 HBL1_DMSO_200M_050219_1,16861,SSSVQVPWER False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16862 81.315 470.0 52745.0 25 0 3737.3 -1 0 27 1178.039721667767 0 1178.039721667767 PEAK CID FTMS 0 0 0 -1 0 17 3 {M(Oxidation (M))|F} 1 -1 3.4949 0.0 0.0 0.14846 0.0 0.0 1048.1284412829966 1155.8688448541627 2203.99728613716 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.14846 - 1 + 1 1.016 25974.5 1.0 11180 5680 16845 HBL1_DMSO_200M_050219_1,16862 HBL1_DMSO_200M_050219_1,16862, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16863 81.324 506.0 351680.0 25 0 103140.0 + 27462 PKCHLGGV 8 128 405.7187385677776 809.4229242023551 2 405.7189208865166 MULTI CID FTMS 0 0 0 16845 230553.21875 0.587534216804394 -1 0.0678558349609375 18 Unmodified _PKCHLGGV_ REV__ENSG00000109181|ENST00000265403|UGT2B10;REV__ENSG00000135220|ENST00000251566|UGT2A3;REV__ENSG00000135226|ENST00000335568|UGT2B28;REV__ENSG00000156096|ENST00000305107|UGT2B4;REV__ENSG00000171234|ENST00000305231|UGT2B7;REV__ENSG00000173610|ENST00000286604|UGT2A1;REV__ENSG00000196620|ENST00000338206|UGT2B15;REV__ENSG00000197888|ENST00000317746|UGT2B17;REV__ENSG00000271271|ENST00000604629|UGT2A2;REV__nc|ENSG00000109181|P36537-2|UGT2B10;REV__nc|ENSG00000135226|Q9BY64-2|UGT2B28;REV__nc|ENSG00000156096|P06133-2|UGT2B4;REV__nc|ENSG00000156096|P06133-3|UGT2B4;REV__nc|ENSG00000173610|P0DTE4-1|UGT2A1;REV__nc|ENSG00000173610|P0DTE4-4|UGT2A1;REV__nc|ENSG00000271271|P0DTE5-2|UGT2A2 5.760428011301431 0.7893668129297577 3 {I|L}GV 3 -1 25.406 0.0 0.0 3.1388 0.0 0.0 522.2377873388771 0.0 522.2377873388771 0.0 7.703037561203843 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L}GV 3.1388 - 130 + 1 1.016 144167.5 1.0 11181 5680 16845 HBL1_DMSO_200M_050219_1,16863 HBL1_DMSO_200M_050219_1,16863,PKCHLGGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16864 81.333 532.0 307070.0 25 0 44460.0 -1 0 171 364.7494945229016 0 364.7498351931572 PEAK CID FTMS 0 0 0 16845 218066.625 1.0 0 0.0 19 3 {I|L}{I|L}K 3 -1 14.926 0.0 0.0 2.0518 0.0 0.0 242.12500251632576 128.07232080631096 370.1973233226368 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.2887254899964357 {I|L}{I|L}K 2.0518 - 24 + 1 1.016 129743.9 1.0 11182 5680 16845 HBL1_DMSO_200M_050219_1,16864 HBL1_DMSO_200M_050219_1,16864, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16865 81.341 400.0 313600.0 25 0 23173.0 + 15628 IQGPPEVIRAL 11 160 596.8553851370747 0 596.8557006716728 PEAK CID FTMS 0 0 0 16845 188839.265625 0.5821143128961371 3 -0.2499008178710937 20 Unmodified _IQGPPEVIRAL_ ENSG00000093144|ENST00000454859|ECHDC1;ENST00000475319.1_1_6:127611016-127636085:-|nuORF;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1 39.21299971606389 0.1369613843298424 3 GPPEV{I|L} 6 5 31.107 0.0 0.0 2.6103 0.0 0.0 241.13885735800983 355.2105806940063 596.3494380520161 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + GPPEV{I|L} 2.6103 + + 166 + 1 1.016 96732.0 1.0 11183 5680 16845 HBL1_DMSO_200M_050219_1,16865 HBL1_DMSO_200M_050219_1,16865,IQGPPEVIRAL False True IQGPPEVIRAL 81.340643 596.855700671673 14695620.0 16845.0 nc|ENSG00000093144|Q9NTX5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;;ENST00000475319.1_1_6:127611016-127636085:-|nuORF;;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;;ENSG00000093144|ENST00000454859|ECHDC1 5.9805192947387695 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16867 81.345 9.7 5025800.0 25 0 420950.0 + 15599 IPYQDLPHL 9 77 548.2950953149975 1094.575637696795 2 548.2954589724541 MULTI CID FTMS 0 0 0 16866 5571596.5 1.0 0 0.0 1 Unmodified _IPYQDLPHL_ ENSG00000074416|ENST00000265052|MGLL;ENST00000479967.5_1_3:127434467-127541990:-|nuORF;nc|ENSG00000074416|Q99685-2|MGLL;nc|ENSG00000074416|Q99685|MGLL 49.93300154707207 0.0405168250806675 3 {I|L}PYQD{I|L}P[H{I|L}] 9 0 + 80.314 0.0 0.0 7.3375 7.3375 93.61 0.0 0.0 0.0 47.1265249738142 4.762036441594191 4.762036441594191 13.455612550363796 0 0.75 1.6989700043360187 0.3494850021680094 0.4247425010840047 + + {I|L}PYQD{I|L}P[H{I|L}];{I|L}PY[AG]D{I|L}P[H{I|L}] 7.3375;6.1082 +;- + 189 + 1 1.008 44852.5 1.0 11184 5681 16866 HBL1_DMSO_200M_050219_1,16867 HBL1_DMSO_200M_050219_1,16867,IPYQDLPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16868 81.346 18.0 2179000.0 25 0 323720.0 + 36636 TATMHILVV 9 58 492.7810336491686 983.5475143651372 2 492.7811462283134 MULTI CID FTMS 0 0 0 16866 2257511.75 0.8008936436515451 1 -0.0620651245117187 2 Unmodified _TATMHILVV_ ENSG00000164880|ENST00000404767|INTS1;ENST00000468115.1_1_7:1523234-1533501:-|nuORF 44.40701690623563 0.0526327925666318 3 [H{I|L}]MT[TA]{I|L}VV 9 6 + 27.654 0.0 0.0 2.8117 2.8117 72.789 0.0 0.0 0.0 2.676062401770313 13.050077918659683 2.676062401770313 3.807196863200844 0 0.4247425010840047 0.0 0.805462187404089 0.0 [H{I|L}]MT[TA]{I|L}VV;[H{I|L}]MT{I|L}[TA]VV;[H{I|L}]{I|L}[MT][TA]VV 2.8117;2.4246;0.90473 -;-;- 102 1 1.008 37565.9 1.0 11185 5681 16866 HBL1_DMSO_200M_050219_1,16868 HBL1_DMSO_200M_050219_1,16868,TATMHILVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16869 81.347 11.0 5551400.0 25 0 541410.0 + 40987 VMAPRTLLL 9 75 507.3124166869351 1012.6102804406702 2 507.3126708865166 MULTI CID FTMS 0 0 0 16866 5027744.5 0.1668402904867597 -3 0.2413101196289062 3 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 32.78568957990786 0.1150597335874693 3 VMA 3 6 54.693 0.0 0.0 5.4012 0.0 0.0 0.0 708.4425791462916 708.4425791462916 32.25772496747986 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + VMA 5.4012 + + 76 + 1 1.008 48241.3 1.0 11186 5681 16866 HBL1_DMSO_200M_050219_1,16869 HBL1_DMSO_200M_050219_1,16869,VMAPRTLLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16870 81.348 19.0 3411900.0 25 0 486500.0 + 9216 FGIDLDTRV 9 62 518.2776553890703 1034.5407578449406 2 518.2774536013603 MULTI CID FTMS 0 0 0 16866 2908448.5 0.6963925103856146 -1 0.1008682250976562 4 Unmodified _FGIDLDTRV_ ENSG00000033050|ENST00000287844|ABCF2;ENST00000465687.1_1_3:88367275-88367665:+|nuORF;nc|ENSG00000285292|Q9UG63-2|ABCF2 28.49450938151212 0.1686335738423394 3 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}VSV{I|L}GE 10 9 + 66.679 0.0 0.0 6.4453 6.4453 78.712 0.0 0.0 0.0 0.9382657923962512 1.474315640635595 0.9382657923962512 0.9382657923962512 0 1.5074908058443608 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}VSV{I|L}GE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VD{I|L}D{I|L}GE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VEVD{I|L}GE;{[VA]|[{I|L}G]}D{M(Oxidation (M))|F}VSV{I|L}GE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VDEV{I|L}GE;{M(Oxidation (M))|F}G{I|L}D{I|L}[TA]{I|L}W;{M(Oxidation (M))|F}G{I|L}VSVD{I|L}W;{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[TA]{I|L}D{I|L}GE;{[VA]|[{I|L}G]}{M(Oxidation (M))|F}DVSV{I|L}GE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VEDV{I|L}GE 6.4453;6.3546;5.6789;5.6284;5.5803;5.2365;5.157;5.0731;4.9936;4.9047 -;-;-;-;-;-;-;-;-;- 440 1 1.008 51841.6 1.0 11187 5681 16866 HBL1_DMSO_200M_050219_1,16870 HBL1_DMSO_200M_050219_1,16870,FGIDLDTRV False True FGIDLDTRV 81.348353 518.27745360136 70706576.0 16866.0 ENSG00000033050|ENST00000287844|ABCF2;;ENST00000465687.1_1_3:88367275-88367665:+|nuORF;;nc|ENSG00000285292|Q9UG63-2|ABCF2 5.257029215494792 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16871 81.35 30.0 1497400.0 25 0 170070.0 + 37306 TIRYPDPLI 9 64 544.3109498194198 1086.6073467056394 2 544.3123046755791 MULTI CID FTMS 0 0 0 16866 1583161.125 0.050395846461553 18 -1.4328536987304688 5 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 38.17557092003332 0.0854718145212029 3 [{I|L}T][YR][DP]P{I|L}{I|L} 9 0 + 52.469 0.0 0.0 4.8287 4.8287 87.564 0.0 0.0 0.0 13.969319389390831 33.315016636499024 13.969319389390831 36.32531659313884 0 1.6549471895720984 1.6989700043360187 0.4247425010840047 0.0 + + [{I|L}T][YR][DP]P{I|L}{I|L};[{I|L}P][W{M(Oxidation (M))|F}][R{I|L}][KQ] 4.8287;1.4857 +;- + 67 1 1.008 44784.8 1.0 11188 5681 16866 HBL1_DMSO_200M_050219_1,16871 HBL1_DMSO_200M_050219_1,16871,TIRYPDPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16872 81.351 18.0 3238900.0 25 0 332460.0 + 32097 RVLQALEGL 9 88 499.8024202015411 997.5902874698822 2 499.8034545779228 MULTI CID FTMS 0 0 0 16866 1471549.0 0.6836674996384906 2 -0.1490325927734375 6 Unmodified _RVLQALEGL_ ENSG00000105372|ENST00000598742|RPS19 21.53697664764585 0.2571576504437394 3 [{I|L}A]RRA{I|L}EG{I|L} 9 4 + 43.139 0.0 0.0 4.3243 4.3243 85.324 0.0 0.0 0.0 1.1954370472159326 21.25447181216778 1.1954370472159326 22.55780949711784 0 0.3807196863200844 0.8239087409443188 0.0 0.0 [{I|L}A]RRA{I|L}EG{I|L};[{I|L}A]RRA{I|L}T[TP];[KC][KA]A[PG]PKV;[KC][KA][QP]PKV;[{I|L}A]RR[NG]V{[NV]|[RG]} 4.3243;2.0631;1.1913;0.53651;0.0069555 -;-;-;-;- 258 1 1.008 49642.0 1.0 11189 5681 16866 HBL1_DMSO_200M_050219_1,16872 HBL1_DMSO_200M_050219_1,16872,RVLQALEGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16873 81.353 102.0 1440600.0 25 0 276760.0 14113 IATLLVWI 8 130 464.7957899699505 927.577027006701 2 464.7950012087822 MULTI CID FTMS 0 0 0 16866 1286686.5 1.0 0 0.0 7 Unmodified _IATLLVWI_ ENSG00000165240|ENST00000341514|ATP7A;nc|ENSG00000165240|Q04656-2|ATP7A;nc|ENSG00000165240|Q04656-3|ATP7A;nc|ENSG00000165240|Q04656-5|ATP7A 59.79521254764295 0.1151759508933577 3 {I|L}AT{I|L}{I|L}{[RE]|[WV]}{I|L} 8 0 + 80.922 0.0 0.0 8.724 8.724 88.789 0.0 0.0 0.0 49.36349630093929 11.847365560341288 11.847365560341288 4.203103093438969 0 1.3494850021680094 2.0 0.5 0.2742275032520141 + + {I|L}AT{I|L}{I|L}{[RE]|[WV]}{I|L};{I|L}A{I|L}T{I|L}{[RE]|[WV]}{I|L};{I|L}AT{I|L}{I|L}[W{I|L}]V;{I|L}A{I|L}T{I|L}[W{I|L}]V;[{I|L}A]TVVE[{I|L}A]{I|L};[{I|L}T]AVVE[{I|L}A]{I|L};[{I|L}A]GDKK[{I|L}A]{I|L};[{I|L}T][R{I|L}]E[{I|L}A]{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]E[{I|L}A]{I|L};{[QN]|[E{I|L}]|[KN]}NKK[{I|L}A]{I|L} 8.724;8.2709;7.2934;6.8402;4.766;3.6993;2.6592;2.2474;1.4769;1.2871 +;-;-;-;-;-;-;-;-;- + 664 + 1 1.008 115704.6 1.0 11190 5681 16866 HBL1_DMSO_200M_050219_1,16873 HBL1_DMSO_200M_050219_1,16873,IATLLVWI True False IATILREI 81.352891 464.7956 11526579.0 16866.0 ENST00000492127.5_1_2:242439390-242441021:-|nuORF;;nc|ENSG00000115694|O00506-3|STK25;;nc|ENSG00000102572|Q9Y6E0|STK24;;nc|ENSG00000115694|O00506-2|STK25;;ENSG00000102572|ENST00000539966|STK24;;ENSG00000115694|ENST00000316586|STK25 0.4984052181243896 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16874 81.355 93.0 1438600.0 25 0 245060.0 -1 LASTECFL 8 104 470.7265013201815 939.438449707163 2 470.7264282107353 MULTI CID FTMS 0 0 0 16866 1117561.375 0.277048916776535 -5 0.3271560668945312 8 Carbamidomethyl (C) _LASTEC(Carbamidomethyl (C))FL_ ENSG00000196248|ENST00000641123|OR10S1;nc|ENSG00000196248|Q8NGN2|OR10S1 26.34127834903884 0.4900704351052977 3 {I|L}A{I|L} 3 -1 46.995 0.0 0.0 5.0024 0.0 0.0 0.0 639.2096659864293 639.2096659864293 29.5205343810445 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}A{I|L} 5.0024 - 227 + 1 1.008 110059.9 1.0 11191 5681 16866 HBL1_DMSO_200M_050219_1,16874 HBL1_DMSO_200M_050219_1,16874,LASTECFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16875 81.357 86.0 1176600.0 25 0 237260.0 -1 ALLETYCA 8 80 314.15316800795216 0 314.1532775759697 PEAK CID FTMS 0 0 0 16866 737408.8125 0.2375771647385768 -5 0.3271560668945312 9 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 26.88365393820708 0.2878692218834006 3 A 1 -1 6.9897 0.0 0.0 1.116 0.0 0.0 470.1650416049684 82.06701074771718 552.2320523526855 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.116 + + 5 + 1 1.008 91524.6 1.0 11192 5681 16866 HBL1_DMSO_200M_050219_1,16875 HBL1_DMSO_200M_050219_1,16875,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16876 81.359 119.0 1251600.0 25 0 124640.0 + 39537 AYLIVKEL 8 123 474.7452695489239 947.4759861646478 2 474.7451049685478 MULTI CID FTMS 0 0 0 16866 654861.4375 0.1624740273422252 11 -0.8842239379882812 10 Unmodified _VAVSCTQQL_ ENSG00000177917|ENST00000326446|ARL6IP6 18.1463463914782 0.3454829746528889 3 VAV 3 6 36.288 0.0 0.0 3.83 0.0 0.0 0.0 675.2866304986936 675.2866304986936 12.335993087233206 0.0 0.0 0.0 0 0.1595680409956017 1.0 0.0 0.0 + VAV 3.83 + + 540 + 1 1.008 116051.3 1.0 11193 5681 16866 HBL1_DMSO_200M_050219_1,16876 HBL1_DMSO_200M_050219_1,16876,VAVSCTQQL False False AYLIVKEL 81.359328 474.745104968548 2991093.25 16866.0 ENSG00000177917|ENST00000326446|ARL6IP6 3.29574982325236 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16877 81.364 265.0 565170.0 25 0 86900.0 + -1 EVNSILCQM 9 156 555.2516158244252 1108.4886787156504 2 555.2524291872978 MULTI CID FTMS 0 0 0 16866 573085.5625 0.5825578067991017 1 -0.0620651245117187 11 Carbamidomethyl (C),Oxidation (M) _EVNSILC(Carbamidomethyl (C))QM(Oxidation (M))_ REV__CON__O76013;REV__ENSG00000126337|ENST00000328119|KRT36;REV__nc|ENSG00000126337|O76013-2|KRT36 37.97399986684836 0.0865783450051559 3 {[QV]|[N{I|L}]|[RA]|[KV]}SD{I|L} 5 -1 61.564 0.0 0.0 5.5538 0.0 0.0 0.0 563.1946473037941 563.1946473037941 28.0759698975614 0.0 0.0 0.0 0 0.5 2.0 0.9489700043360187 0.7865754470559564 {[QV]|[N{I|L}]|[RA]|[KV]}SD{I|L} 5.5538 - 927 1 1.008 119707.5 1.0 11194 5681 16866 HBL1_DMSO_200M_050219_1,16877 HBL1_DMSO_200M_050219_1,16877,EVNSILCQM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16878 81.366 106.0 890850.0 25 0 107320.0 + 18857 LASQHEEL 8 110 309.4904109860205 925.4494035582616 3 309.4901611208916 MULTI CID FTMS 0 0 0 16866 562606.625 0.4468431402274517 -5 0.3271560668945312 12 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 3 {I|L}{M(Oxidation (M))|F} 2 -1 19.464 0.0 0.0 2.1032 0.0 0.0 647.3025215353351 0.0 647.3025215353351 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 2.1032 - 42 1 1.008 83326.8 1.0 11195 5681 16866 HBL1_DMSO_200M_050219_1,16878 HBL1_DMSO_200M_050219_1,16878,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16879 81.369 98.0 885630.0 25 0 98141.0 + 45607 YVISEGFLKA 10 108 563.8110579281387 1125.6075629230772 2 563.8102905154228 MULTI CID FTMS 0 0 0 16866 545843.625 0.4719547952206939 -2 0.1687240600585937 13 Unmodified _YVISEGFLKA_ ENSG00000006831|ENST00000357103|ADIPOR2 49.55428908609986 0.0827668555218455 3 YV{I|L}SE 5 5 63.954 0.0 0.0 5.6817 0.0 0.0 0.0 531.2951143854124 531.2951143854124 32.44341577071616 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3252574989159953 0.0 + YV{I|L}SE 5.6817 + + 345 + 1 1.008 70943.9 1.0 11196 5681 16866 HBL1_DMSO_200M_050219_1,16879 HBL1_DMSO_200M_050219_1,16879,YVISEGFLKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16880 81.37 61.0 691240.0 25 0 63330.0 + 39932 VFTQPCQTV 9 77 511.7522141725447 1021.4898754118894 2 511.2534362673759 MULTI CID FTMS 0 0 0 16866 480098.46875 0.6216769663401023 -10 0.4686660766601562 14 Unmodified _VFTQPCQTV_ REV__ENSG00000178568|ENST00000342788|ERBB4;REV__ENST00000484594.5_1_2:212426591-213403254:-|nuORF;REV__nc|ENSG00000178568|Q15303-2|ERBB4;REV__nc|ENSG00000178568|Q15303-3|ERBB4;REV__nc|ENSG00000178568|Q15303-4|ERBB4 8.593279151180031 0.6146971463335029 3 {I|L} 1 -1 14.604 0.0 0.0 1.4297 0.0 0.0 890.3947654038801 0.0 890.3947654038801 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4297 - 41 + 1 1.008 40407.9 1.0 11197 5681 16866 HBL1_DMSO_200M_050219_1,16880 HBL1_DMSO_200M_050219_1,16880,VFTQPCQTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16881 81.372 62.0 936790.0 25 0 70747.0 + 34474 SMLDDLRNV 9 88 531.7658485823462 1061.5171442314922 2 531.7665283083916 MULTI CID FTMS 0 0 0 16866 438560.59375 1.0 0 0.0 15 Unmodified _SMLDDLRNV_ ENSG00000160255|ENST00000652462|ITGB2;ENST00000498666.5_1_21:46314678-46340855:-|nuORF;ENST00000521987.1_1_21:46321596-46323430:-|nuORF 16.149105407346934 0.3995459350917656 3 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DD{I|L}[RN]V 9 0 + 48.65 0.0 0.0 4.583 4.583 80.922 0.0 0.0 0.0 36.17554457367163 0.5014445271442725 0.5014445271442725 7.346855566025532 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + + {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DD{I|L}[RN]V;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}DD[RN]V{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}DD[RN]{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[HA][YE]V{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[HA][YE]{I|L}V;[{I|L}P][HQ]H[KC]{[CP]|[EA]};{NN|[MP]|[D{I|L}]|[EV]}[KP][YN]{I|L}{[CP]|[EA]};[R{I|L}][PS][YN]{I|L}{[CP]|[EA]} 4.583;3.8909;3.662;1.841;1.612;1.022;0.75407;0.64714 +;-;-;-;-;-;-;- + 127 + 1 1.008 51166.8 1.0 11198 5681 16866 HBL1_DMSO_200M_050219_1,16881 HBL1_DMSO_200M_050219_1,16881,SMLDDLRNV False True SMLDDLRNV 81.37167 531.766528308392 3575757.0 16866.0 ENST00000521987.1_1_21:46321596-46323430:-|nuORF;;ENST00000498666.5_1_21:46314678-46340855:-|nuORF;;ENSG00000160255|ENST00000652462|ITGB2 6.385519981384277 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16882 81.377 301.0 476550.0 25 0 66081.0 + -1 SFYDSQGIHF 10 152 600.8109659558507 1199.6073789785014 2 600.8116332888603 MULTI CID FTMS 0 0 0 16866 433214.3125 0.3560936432870459 7 -0.587860107421875 16 Oxidation (M) _HM(Oxidation (M))FIFTIYI_ ENSG00000119231|ENST00000323460|SENP5 23.1484247019978 0.2366544122328345 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WWVS{I|L}Y{I|L} 9 -1 + 57.775 0.0 0.0 4.8161 4.8161 78.744 0.0 0.0 0.0 15.051499783199064 14.973024840566469 14.973024840566469 4.476212463643421 0 0.4247425010840047 2.0 1.924742501084005 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WWVS{I|L}Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WWVTVY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV]{[SA]|[TG]}VS{I|L}Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV]{[SA]|[TG]}VTVY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV]V{[SA]|[TG]}S{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{[{M(Oxidation (M))|F}C]|[YS]}VS{I|L}Y{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}T{[SA]|[TG]}VS{I|L}Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV]V[MN]{I|L}Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV]V{[SA]|[TG]}TVY{I|L};{NN|[MP]|[D{I|L}]|[EV]}[YG]{[SA]|[TG]}VS{I|L}Y{I|L} 4.8161;4.443;4.4308;4.0577;3.7832;3.5614;3.5092;3.4669;3.4101;3.3844 -;-;-;-;-;-;-;-;-;- 2537 1 1.008 104994.7 1.0 11199 5681 16866 HBL1_DMSO_200M_050219_1,16882 HBL1_DMSO_200M_050219_1,16882,HMFIFTIYI False False SFYDSQGIHF 81.377191 600.81163328886 1556900.0 16866.0 ENSG00000119231|ENST00000323460|SENP5 2.8808480898539224 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16883 81.384 361.0 580340.0 25 0 59271.0 + 13214 HGMIMLRI 8 181 485.76934583357854 969.5241387339572 2 485.7705566287041 MULTI CID FTMS 0 0 0 16866 346092.25 0.046577794531744 12 -0.9349746704101562 17 Unmodified _HGMIMLRI_ ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1 63.562846038646086 0.116059504757595 3 HGM{I|L}M[R{I|L}]{I|L} 8 0 + 63.283 0.0 0.0 6.5272 6.5272 78.731 0.0 0.0 0.0 31.870866433571443 7.523204176022773 7.523204176022773 0.796896906561031 0 2.3283409326844264 0.8860566476931632 0.0 0.3494850021680094 + + HGM{I|L}M[R{I|L}]{I|L};HGM{I|L}{I|L}{[WT]|[RM]}{I|L};HG{I|L}MM[R{I|L}]{I|L};HG{I|L}M{I|L}{[WT]|[RM]}{I|L};HGM{I|L}M{I|L}{I|L}R;{I|L}HGM{I|L}{[WT]|[RM]}{I|L};HG{I|L}MM{I|L}{I|L}R;{I|L}HGMM[R{I|L}]{I|L};H{I|L}GMM[R{I|L}]{I|L};H{I|L}GM{I|L}{[WT]|[RM]}{I|L} 6.5272;6.445;6.1345;6.0523;5.3576;5.1338;4.9649;4.8233;4.7049;4.6227 +;-;-;-;-;-;-;-;-;- + 1545 + 1 1.008 162636.4 1.0 11200 5681 16866 HBL1_DMSO_200M_050219_1,16883 HBL1_DMSO_200M_050219_1,16883,HGMIMLRI True True HGMIMLRI 81.383683 485.770556628704 210272816.0 16866.0 nc|ENSG00000095139|P48444-2|ARCN1;;ENSG00000095139|ENST00000264028|ARCN1 5.468519687652588 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16884 81.39 348.0 545900.0 25 0 40308.0 + 44886 YPPNPWREI 9 159 586.2983824392117 1170.5822119452232 2 586.2993041872978 MULTI CID FTMS 0 0 0 16866 255680.015625 0.1416420225646397 18 -1.4328536987304688 18 Unmodified _YPPNPWREI_ ENSG00000115825|ENST00000234179|PRKD3 32.78568957990786 0.1150597335874693 3 YPPN{I|L}SA{M(Oxidation (M))|F}S 9 5 96.257 0.0 0.0 8.223 0.0 0.0 0.0 191.0831698053344 191.0831698053344 60.86742101142519 0.0 0.0 0.0 0 0.7742275032520141 2.0 1.0941876774005248 0.3494850021680094 YPPN{I|L}SA{M(Oxidation (M))|F}S 8.223 - 7570 + 1 1.008 148166.2 1.0 11201 5681 16866 HBL1_DMSO_200M_050219_1,16884 HBL1_DMSO_200M_050219_1,16884,YPPNPWREI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16885 81.396 348.0 327810.0 25 0 19591.0 + 22986 LSGRDLQFLL 10 189 581.3350933478131 1160.655633762426 2 581.3337280154228 MULTI CID FTMS 0 0 0 16866 270176.3125 0.154928104003604 8 -0.644927978515625 19 Unmodified _LSGRDLQFLL_ ENSG00000152127|ENST00000281923|MGAT5 38.17557092003332 0.1768326257063233 3 {[TV]|[{I|L}S]}RREQ{M(Oxidation (M))|F} 7 5 41.753 0.0 0.0 3.5974 0.0 0.0 0.0 241.15504334977743 241.15504334977743 23.99501891925373 0.0 0.0 0.0 0 0.6382104921644451 1.6989700043360187 0.5189301784845296 0.9247425010840048 {[TV]|[{I|L}S]}RREQ{M(Oxidation (M))|F} 3.5974 - 2042 1 1.008 90097.8 1.0 11202 5681 16866 HBL1_DMSO_200M_050219_1,16885 HBL1_DMSO_200M_050219_1,16885,LSGRDLQFLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16886 81.403 361.0 446120.0 25 0 119850.0 + -1 TAPPEALLM 9 108 942.5007759502772 0 942.5029174685478 PEAK CID FTMS 0 0 0 16866 238639.15625 0.8505768007689934 -5 0.3271560668945312 20 ENSG00000184967|ENST00000330579|NOC4L;ENST00000538784.2_1_12:132635515-132636943:+|nuORF 3 M{I|L}{I|L}ATAE 7 -1 43.994 0.0 0.0 2.3364 0.0 0.0 959.5104497503607 191.0835970514281 1150.594046801789 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4308845489566888 0.0 M{I|L}{I|L}ATAE 2.3364 - 1196 + 1 1.008 109900.7 1.0 11203 5681 16866 HBL1_DMSO_200M_050219_1,16886 HBL1_DMSO_200M_050219_1,16886, False False TAPPEALLM 81.402793 942.502917468548 2360283.0 16866.0 ENSG00000184967|ENST00000330579|NOC4L;;ENST00000538784.2_1_12:132635515-132636943:+|nuORF 6.0718153317769366 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16888 81.407 13.0 3139100.0 25 0 252720.0 + 21965 LPPNHILEI 9 75 523.3041480219179 1044.5937431106356 2 523.3035766482353 MULTI CID FTMS 0 0 0 16887 2849158.75 0.7003355290418726 11 -0.8729095458984375 1 Unmodified _LPPNHILEI_ ENSG00000105397|ENST00000525621|TYK2 15.847184025352805 0.4077185912009129 3 [PS]{I|L}D{I|L}YPK{I|L} 9 7 + 69.645 0.0 0.0 6.6672 6.6672 85.498 0.0 0.0 0.0 30.47061018945996 12.05136871872881 12.05136871872881 4.894257603872077 0 0.8252574989159953 2.0 0.0 0.0 [PS]{I|L}D{I|L}YPK{I|L};[{I|L}P]SD{I|L}YPK{I|L};[{I|L}P]YP{[MS]|[{M(Oxidation (M))|F}A]}PK{I|L};[{I|L}T][KQ]{[MS]|[{M(Oxidation (M))|F}A]}PK{I|L} 6.6672;6.1986;3.2764;0.32351 -;-;-;- 244 + 1 1.008 41436.2 1.0 11204 5682 16887 HBL1_DMSO_200M_050219_1,16888 HBL1_DMSO_200M_050219_1,16888,LPPNHILEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16889 81.408 29.0 1159500.0 25 0 71478.0 + 15292 IPIQINVGTTV 11 78 577.8424117855567 1153.6702706379133 2 577.8427001833916 MULTI CID FTMS 0 0 0 16887 1801806.875 1.0 0 0.0 2 Unmodified _IPIQINVGTTV_ ENSG00000204463|ENST00000676615|BAG6;ENST00000469182.1_1_6:31610750-31613330:-|nuORF;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 32.78568957990786 0.3235288296534633 3 [{I|L}P]Q{I|L}NV{I|L}GR 9 5 59.633 0.0 0.0 5.169 0.0 0.0 0.0 160.05983997478623 160.05983997478623 35.78585986251227 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.3807196863200844 [{I|L}P]Q{I|L}NV{I|L}GR 5.169 - 944 1 1.008 32669.1 1.0 11205 5682 16887 HBL1_DMSO_200M_050219_1,16889 HBL1_DMSO_200M_050219_1,16889,IPIQINVGTTV False True IPIQINVGTTV 81.408059 577.842700183392 19938208.0 16887.0 nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000204463|P46379-5|BAG6;;ENST00000469182.1_1_6:31610750-31613330:-|nuORF;;nc|ENSG00000204463|P46379-4|BAG6;;nc|ENSG00000204463|P46379-2|BAG6;;ENSG00000204463|ENST00000676615|BAG6 5.157926241556804 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16890 81.409 13.0 3133100.0 25 0 243160.0 + 35452 STLILPTGPP 10 71 498.2931144968455 994.571676060491 2 498.2928039431572 MULTI CID FTMS 0 0 0 16887 2930895.0 0.329116796742267 -2 0.162933349609375 3 Unmodified _STLILPTGPP_ REV__ENST00000305557.9_1_2:74666898-74667633:-|nuORF;REV__ENST00000460968.1_1_2:74666898-74667252:-|nuORF 32.30548876998284 0.2428506522065767 3 {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV 9 -1 + 45.869 0.0 0.0 4.6119 4.6119 84.746 0.0 0.0 0.0 25.18114684785509 10.20181229336984 10.20181229336984 12.557809497117844 0 0.3807196863200844 0.0 0.0 0.0 {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV;{[VA]|[{I|L}G]}[YR]{I|L}{M(Oxidation (M))|F}KV;{[MG]|[TS]}TV[{I|L}P]{I|L}[PA]P;{[TV]|[{I|L}S]}[VP][{I|L}P]V[RD] 4.6119;3.3493;1.321;0.94512 -;-;-;- 159 + 1 1.008 38185.0 1.0 11206 5682 16887 HBL1_DMSO_200M_050219_1,16890 HBL1_DMSO_200M_050219_1,16890,STLILPTGPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16891 81.41 25.0 2634900.0 25 0 531690.0 -1 0 68 336.1045918213961 670.1946307095923 2 336.1049377322197 MULTI CID FTMS 0 0 0 16887 2092021.75 0.6173248408771027 -2 0.162933349609375 4 3 W 1 -1 1.5938 0.0 0.0 0.23781 0.0 0.0 147.917910594161 333.1692293756469 481.087139969808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.23781 - 3 + 1 1.008 60218.3 1.0 11207 5682 16887 HBL1_DMSO_200M_050219_1,16891 HBL1_DMSO_200M_050219_1,16891, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16892 81.412 26.0 1417100.0 25 0 99955.0 + -1 YSASMDPPIS 10 83 542.2354349652016 1082.4563169972032 2 542.2360107302666 MULTI CID FTMS 0 0 0 16887 1400461.5 0.7310524704432398 10 -0.8221588134765625 5 Oxidation (M) _YSASM(Oxidation (M))DPPIS_ REV__ENSG00000142794|ENST00000318249|NBPF3;REV__nc|ENSG00000142794|Q9H094-2|NBPF3;REV__nc|ENSG00000142794|Q9H094-5|NBPF3 19.256988751693697 0.5244284437930726 3 PPTV 4 -1 29.117 0.0 0.0 2.6899 0.0 0.0 670.2226041695975 0.0 670.2226041695975 0.0 3.175325314361359 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.0 PPTV 2.6899 - 74 + 1 1.008 40840.6 1.0 11208 5682 16887 HBL1_DMSO_200M_050219_1,16892 HBL1_DMSO_200M_050219_1,16892,YSASMDPPIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16893 81.415 190.0 689730.0 25 0 54155.0 -1 0 124 647.3757613475314 646.3684848809313 1 648.3755370974541 MULTI CID FTMS 0 0 0 16887 1145768.0 0.5452771625378702 6 -0.5257949829101562 6 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TA]{I|L}V 6 -1 + 33.033 0.0 0.0 5.1106 5.1106 80.691 0.0 0.0 0.0 18.18636235841012 9.36114487386515 9.36114487386515 5.268024924119665 0 0.4291746928241126 1.3979400086720375 0.25 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TA]{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ATV;[{I|L}V]AV{M(Oxidation (M))|F}V;[{I|L}A][MT]{I|L}V;[{I|L}A]VV{M(Oxidation (M))|F}V;[TA]P{M(Oxidation (M))|F}{I|L}V;{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}{I|L}V;[TA]P{M(Oxidation (M))|F}V{I|L};{[VA]|[{I|L}G]}{I|L}V{M(Oxidation (M))|F}V;{I|L}{I|L}[CS]{I|L}V 5.1106;4.2956;2.1967;2.1256;1.5661;1.4199;1.2782;1.1633;1.062;0.59854 -;-;-;-;-;-;-;-;-;- 232 1 1.008 106652.8 1.0 11209 5682 16887 HBL1_DMSO_200M_050219_1,16893 HBL1_DMSO_200M_050219_1,16893, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16894 81.416 29.0 1919900.0 25 0 162090.0 + 12517 GVFEGKLNVI 10 85 538.3099608265532 1074.6053687199062 2 538.3087646365166 MULTI CID FTMS 0 0 0 16887 796368.5 0.7103206157663698 -1 0.0620651245117187 7 Unmodified _GVFEGKLNVI_ ENSG00000100060|ENST00000356998|MFNG;ENST00000489515.1_1_22:37866003-37868629:-|nuORF;nc|ENSG00000100060|O00587-2|MFNG 16.149105407346934 0.5765757077271437 3 [VG]{M(Oxidation (M))|F}E 4 6 32.224 0.0 0.0 2.9986 0.0 0.0 0.0 639.3845919244749 639.3845919244749 19.74932183384788 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + [VG]{M(Oxidation (M))|F}E 2.9986 + + 94 + 1 1.008 50126.4 1.0 11210 5682 16887 HBL1_DMSO_200M_050219_1,16894 HBL1_DMSO_200M_050219_1,16894,GVFEGKLNVI False True GVFEGKLNVI 81.416451 538.308764636517 7561386.0 16887.0 ENSG00000100060|ENST00000356998|MFNG;;ENST00000489515.1_1_22:37866003-37868629:-|nuORF;;nc|ENSG00000100060|O00587-2|MFNG 4.161807696024577 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16895 81.418 60.0 1392900.0 25 0 286790.0 + 6560 EALPVKLI 8 92 441.786492076808 881.5584312204161 2 441.7865173220634 MULTI CID FTMS 0 0 0 16887 789925.6875 0.1485412697750065 5 -0.3984298706054687 8 Unmodified _EALPVKLI_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;nc|ENSG00000171848|P31350-2|RRM2 53.57557251787612 0.1224291679108181 3 {[CP]|[EA]}{I|L}PVK{I|L}{I|L} 8 0 + 38.242 0.0 0.0 4.338 4.338 86.064 0.0 0.0 0.0 14.085142482848298 12.0836324234689 12.0836324234689 38.24183023917298 0 0.7887254899964358 0.0 0.0 0.0 + + {[CP]|[EA]}{I|L}PVK{I|L}{I|L} 4.338 + + 199 + 1 1.008 68089.0 1.0 11211 5682 16887 HBL1_DMSO_200M_050219_1,16895 HBL1_DMSO_200M_050219_1,16895,EALPVKLI True True EALPVKLI 81.417926 441.786517322063 124515252.0 16887.0 ENSG00000171848|ENST00000304567|RRM2;;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;;nc|ENSG00000171848|P31350-2|RRM2 3.2855876286824546 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16896 81.422 242.0 511730.0 25 0 89631.0 21004 LNTFKLFLKET 11 145 677.3950112965572 1352.7754696599145 2 677.3957397341728 MULTI CID FTMS 0 0 0 16887 694201.5625 0.3462021918234851 10 -0.8221588134765625 9 Unmodified _LNTFKLFLKET_ ENSG00000158077|ENST00000299481|NLRP14 11.494710602746466 0.7960433852372589 3 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}G 5 8 39.576 0.0 0.0 2.9255 0.0 0.0 0.0 789.492180435558 789.492180435558 23.88622534431396 0.0 0.0 0.0 0 0.0 0.0 1.579689690656103 0.5451140161145328 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}G 2.9255 - 528 1 1.008 102673.6 1.0 11212 5682 16887 HBL1_DMSO_200M_050219_1,16896 HBL1_DMSO_200M_050219_1,16896,LNTFKLFLKET False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16897 81.425 100.0 1197800.0 25 0 119320.0 + 4264 DAPVALVVHM 10 132 526.2840515947472 1050.5535502562943 2 526.2843505740166 MULTI CID FTMS 0 0 0 16887 645185.0 0.0681214071642115 11 -0.8729095458984375 10 Unmodified _DAPVALVVHM_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 44.40701690623563 0.1129771813061863 3 {[DA]|[EG]}PVA{I|L}VVMH 10 2 + 63.518 0.0 0.0 6.0461 6.0461 86.875 0.0 0.0 0.0 28.85970034672088 7.825160557860933 7.825160557860933 9.006153678640878 0 0.6307196863200843 1.3010299956639813 0.0 0.0 {[DA]|[EG]}PVA{I|L}VVMH;{[DA]|[EG]}PVA{I|L}V[HM]V;{[DA]|[EG]}PVA{I|L}{[ES]|[DT]|[{I|L}C]}H{I|L};{[DA]|[EG]}PVA{I|L}{[ES]|[DT]|[{I|L}C]}{I|L}H;{[DA]|[EG]}PVA[HS]QKV;{[DA]|[EG]}PVA{I|L}[YR]{M(Oxidation (M))|F};{I|L}{I|L}{M(Oxidation (M))|F}[HS]AV[HQ];{I|L}{I|L}G[WQ]AV[HQ];{[DA]|[EG]}PVA[HS][AG]KV;[VP]A{I|L}S[NS]V[HQ] 6.0461;5.1889;4.9162;4.498;3.9957;3.8677;3.6608;3.4434;3.1233;3.0569 -;-;-;-;-;-;-;-;-;- 1049 + 1 1.008 97253.5 1.0 11213 5682 16887 HBL1_DMSO_200M_050219_1,16897 HBL1_DMSO_200M_050219_1,16897,DAPVALVVHM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16898 81.429 250.0 849030.0 25 0 60231.0 + 9905 FPFYGKPMRI 10 131 628.3364646422485 1254.658376351297 2 628.3378784060478 MULTI CID FTMS 0 0 0 16887 659885.1875 0.1455455987128001 -16 0.771087646484375 11 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 81.89019881105858 0.0155187237978306 3 {I|L}M{M(Oxidation (M))|F}YGK{NN|[MP]|[D{I|L}]|[EV]}R{I|L} 10 2 + 86.331 0.0 0.0 6.8808 6.8808 91.235 0.0 0.0 0.0 65.59340704949363 5.299410666261409 5.299410666261409 9.370221870873737 0 1.9802046884880933 2.0 0.3494850021680094 0.7742275032520141 {I|L}M{M(Oxidation (M))|F}YGK{NN|[MP]|[D{I|L}]|[EV]}R{I|L};{I|L}M{M(Oxidation (M))|F}Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RR{I|L};{I|L}M{M(Oxidation (M))|F}YG{[CP]|[EA]}RR{I|L};{I|L}M{M(Oxidation (M))|F}YGK{I|L}{[MG]|[TS]}[VP];{I|L}M{M(Oxidation (M))|F}Y{I|L}{[WN]|[YH]}R{I|L};{I|L}M{M(Oxidation (M))|F}[KG]Y{NN|[MP]|[D{I|L}]|[EV]}R{I|L};{I|L}M{M(Oxidation (M))|F}{I|L}Y{[WN]|[YH]}R{I|L};{I|L}M{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))M][K{I|L}]S{I|L};{I|L}M{M(Oxidation (M))|F}YG{I|L}K{[MG]|[TS]}[VP];{I|L}M{M(Oxidation (M))|F}Y{I|L}GK{[MG]|[TS]}[VP] 6.8808;6.134;6.0975;5.8586;5.7151;5.3039;5.2159;4.8196;4.7946;4.7315 -;-;-;-;-;-;-;-;-;- 2077 + 1 1.008 157703.8 1.0 11214 5682 16887 HBL1_DMSO_200M_050219_1,16898 HBL1_DMSO_200M_050219_1,16898,FPFYGKPMRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16899 81.431 59.0 837230.0 25 0 94879.0 + 39037 TVTSDLLQV 9 79 488.2707307539524 974.5269085747047 2 488.2713806033134 MULTI CID FTMS 0 0 0 16887 282292.15625 1.0 0 0.0 12 Unmodified _TVTSDLLQV_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 30.22481116460888 0.1466181017706357 3 {[TV]|[{I|L}S]}{[WT]|[RM]}E 5 6 21.796 0.0 0.0 2.2365 0.0 0.0 0.0 355.19723263159864 355.19723263159864 4.087484099203277 0.0 0.0 0.0 0 0.0 2.0 0.6989700043360187 0.0 {[TV]|[{I|L}S]}{[WT]|[RM]}E 2.2365 - 310 1 1.008 44390.9 1.0 11215 5682 16887 HBL1_DMSO_200M_050219_1,16899 HBL1_DMSO_200M_050219_1,16899,TVTSDLLQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16900 81.436 307.0 305630.0 25 0 14836.0 -1 0 111 845.8942355959585 1689.773918258717 2 846.3991577029228 MULTI CID FTMS 0 0 0 16887 296574.75 0.2245314064586855 -4 0.303375244140625 13 3 EANQQ[CS]C(Carbamidomethyl (C))V{I|L} 10 -1 56.921 0.0 0.0 3.3686 0.0 0.0 539.286077537817 0.0 539.286077537817 0.0 26.491210102739583 0.0 0.0 0 0.0 0.0 1.316901560044258 1.5994850021680094 EANQQ[CS]C(Carbamidomethyl (C))V{I|L} 3.3686 - 4029 + 1 1.008 67272.6 1.0 11216 5682 16887 HBL1_DMSO_200M_050219_1,16900 HBL1_DMSO_200M_050219_1,16900, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16901 81.445 466.0 421580.0 25 0 46272.0 + -1 GVLGMCRR 8 160 316.8326148258719 947.4760150778156 3 316.8323852419853 MULTI CID FTMS 0 0 0 16887 308632.15625 0.1548700580018512 12 -1.019927978515625 14 Carbamidomethyl (C) _GVLGMC(Carbamidomethyl (C))RR_ REV__ENST00000556125.5_1_14:69864828-69908619:+|nuORF 19.256988751693697 0.6264283240490721 3 GVVKV 5 -1 59.425 0.0 0.0 6.2719 0.0 0.0 0.0 462.132361834437 462.132361834437 44.82061891068248 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.3494850021680094 GVVKV 6.2719 - 333 + 1 1.008 158787.9 1.0 11217 5682 16887 HBL1_DMSO_200M_050219_1,16901 HBL1_DMSO_200M_050219_1,16901,GVLGMCRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16902 81.453 486.0 412690.0 25 0 50830.0 + 13128 HFGAPISP 8 196 413.215762316149 0 413.2155029177666 PEAK CID FTMS 0 0 0 16887 257396.4375 1.0 0 0.0 15 Unmodified _HFGAPISP_ REV__ENSG00000124782|ENST00000379938|RREB1;REV__nc|ENSG00000124782|Q92766-3|RREB1;REV__nc|ENSG00000124782|Q92766-5|RREB1;REV__nc|ENSG00000124782|Q92766-6|RREB1;REV__nc|ENSG00000124782|Q92766|RREB1 9.347437153973935 0.5488964601725408 3 C 1 -1 7.2456 0.0 0.0 0.87888 0.0 0.0 99.06963809754616 619.2985159208592 718.3681540184054 0.0 0.0 0.0 0.0 0 0.0255932271773896 0.0 0.0 0.0 C 0.87888 - 10 + 1 1.008 155214.0 1.0 11218 5682 16887 HBL1_DMSO_200M_050219_1,16902 HBL1_DMSO_200M_050219_1,16902,HFGAPISP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16903 81.46 347.0 296680.0 25 0 21063.0 24489 MIGICEAESWM 11 163 635.2666998449819 1268.5188467567637 2 635.2670165896416 MULTI CID FTMS 0 0 0 16887 237377.5 0.4114083927294785 6 -0.5257949829101562 16 Unmodified _MIGICEAESWM_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 6.723162845929126 0.8434276150410019 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}C(Carbamidomethyl (C))AA{I|L}TQ 9 6 40.564 0.0 0.0 3.1977 0.0 0.0 0.0 263.99302971969195 263.99302971969195 18.18430577439954 0.0 0.0 0.0 0 0.3182503180159344 2.0 0.4247425010840047 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}C(Carbamidomethyl (C))AA{I|L}TQ 3.1977 - 2461 1 1.008 80255.3 1.0 11219 5682 16887 HBL1_DMSO_200M_050219_1,16903 HBL1_DMSO_200M_050219_1,16903,MIGICEAESWM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16904 81.466 357.0 320390.0 25 0 34933.0 + 9151 FFWNSKSTY 9 148 590.2769248618989 1178.5392967905975 2 590.2767211794853 MULTI CID FTMS 0 0 0 16887 250617.765625 1.0 0 0.0 17 Unmodified _FFWNSKSTY_ ENSG00000122729|ENST00000309951|ACO1 34.40172386719151 0.1061884637610825 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}WNS[KS]TY 9 0 + 42.062 0.0 0.0 3.569 3.569 80.105 0.0 0.0 0.0 22.089322578004968 4.436974992327123 4.436974992327123 9.208187539523747 0 0.8494850021680094 0.0 0.4247425010840047 0.4247425010840047 + + {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}WNS[KS]TY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}WGGS[KS]TY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[DA]|[EG]}NS[KS]TY;{[NV]|[RG]}{M(Oxidation (M))|F}HSNW[{M(Oxidation (M))|F}E];[{I|L}V]N[NG]SNW[{M(Oxidation (M))|F}E];[KS]NS[PA]NW[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[QA]TS[KS]TY;[KS]NSWTY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[NV]|[RG]}{I|L}[NG]SNW[{M(Oxidation (M))|F}E];{[QV]|[N{I|L}]|[RA]|[KV]}V[NG]SNW[{M(Oxidation (M))|F}E] 3.569;2.7876;2.7876;2.3323;2.3182;2.2749;1.9164;1.8284;1.8054;1.7747 +;-;-;-;-;-;-;-;-;- + 486 + 1 1.008 87071.6 1.0 11220 5682 16887 HBL1_DMSO_200M_050219_1,16904 HBL1_DMSO_200M_050219_1,16904,FFWNSKSTY True True FFWNSKSTY 81.465959 590.276721179485 2355291.5 16887.0 ENSG00000122729|ENST00000309951|ACO1 6.707134405771892 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16905 81.477 539.0 436360.0 25 0 66318.0 + -1 IAMYCDLA 8 216 319.4775756567915 0 319.4773742556572 PEAK CID FTMS 0 0 0 16887 213414.75 0.3765497943973342 -4 0.303375244140625 18 Carbamidomethyl (C) _IAMYC(Carbamidomethyl (C))DLA_ REV__OR52R1|p.V127M|1|0.35|ENSG00000279270|chr11:4804002-4804002|C/T|missense_variant 11.640296217721598 0.5231213682848052 3 A 1 -1 6.9897 0.0 0.0 1.0974 0.0 0.0 480.81368905596736 82.06709467105702 562.8807837270244 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.0974 + + 18 + 1 1.008 188143.0 1.0 11221 5682 16887 HBL1_DMSO_200M_050219_1,16905 HBL1_DMSO_200M_050219_1,16905,IAMYCDLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16906 81.483 372.0 582740.0 25 0 32027.0 28028 PNLAQRLEALR 11 165 640.8747158755643 1279.7348788179286 2 640.8747436404228 MULTI CID FTMS 0 0 0 16887 200032.578125 0.4713980176081198 -4 0.303375244140625 19 Unmodified _PNLAQRLEALR_ ENSG00000136883|ENST00000640217|KIF12;nc|ENSG00000136883|Q96FN5|KIF12 14.40537977576856 0.7354982482299568 3 [NP]{I|L}QAV{[VA]|[{I|L}G]}{I|L}Q{NN|[MP]|[D{I|L}]|[EV]} 12 6 + 44.108 0.0 0.0 3.4466 3.4466 71.736 0.0 0.0 0.0 7.683914130944878 0.150312510170778 0.150312510170778 2.364389423626143 0 0.0 0.8239087409443188 0.0 1.079689690656103 [NP]{I|L}QAV{[VA]|[{I|L}G]}{I|L}Q{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}QA[R{I|L}]{I|L}Q{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}QAV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[R{I|L}];[NP]{I|L}AGAV{[VA]|[{I|L}G]}{I|L}Q{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}QNG{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[K{I|L}];[NP]{I|L}AGA[R{I|L}]{I|L}Q{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}AGAV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[R{I|L}];[NP]{I|L}QA{[QG]|[NA]}[QA]{I|L}[K{I|L}];[NP]{I|L}AGNG{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[K{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PQAV{[VA]|[{I|L}G]}{I|L}Q{NN|[MP]|[D{I|L}]|[EV]} 3.4466;3.2619;3.2271;3.22;3.1652;3.0329;2.9981;2.9667;2.9362;2.8462 -;-;-;-;-;-;-;-;-;- 5178 1 1.008 163359.2 1.0 11222 5682 16887 HBL1_DMSO_200M_050219_1,16906 HBL1_DMSO_200M_050219_1,16906,PNLAQRLEALR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16907 81.49 355.0 194060.0 25 0 8859.3 + -1 PERWCIEYVKF 11 148 763.8784057497978 0 763.8784057497978 PEAK CID FTMS 0 0 0 -1 0 20 Carbamidomethyl (C) _PERWC(Carbamidomethyl (C))IEYVKF_ REV__ENST00000330817.10_1_22:50294661-50295054:-|nuORF 2.9952420565917617 0.4761840153648598 3 {I|L}S{I|L} 3 -1 11.956 0.0 0.0 0.78359 0.0 0.0 1014.4411243884643 195.0778902643188 1209.5190146527832 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {I|L}S{I|L} 0.78359 - 244 + 1 1.008 54705.0 1.0 11223 5682 16887 HBL1_DMSO_200M_050219_1,16907 HBL1_DMSO_200M_050219_1,16907,PERWCIEYVKF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16909 81.494 2.4 18070000.0 25 0 2811200.0 + -1 AIMPSALAL 9 58 451.7527689299804 901.4909849267608 2 451.7530090212822 MULTI CID FTMS 0 0 0 16908 21241156.0 0.2711214586623033 -3 0.2499008178710937 1 Oxidation (M) _AIM(Oxidation (M))PSALAL_ REV__ENSG00000196531|ENST00000454682|NACA;REV__nc|ENSG00000196531|E9PAV3-2|NACA 38.15118350030904 0.0856056900103839 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 63.082 0.0 0.0 6.9975 6.9975 86.215 0.0 0.0 0.0 24.76203644159419 46.88424994129406 24.76203644159419 4.771212547196626 0 0.6989700043360187 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}ASP{I|L}A{I|L};[{I|L}A]{I|L}CAD{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L} 6.9975;6.4683;6.0806;4.9918;4.8668;4.3376 -;-;-;-;-;- 133 1 1.005 42496.1 1.0 11224 5683 16908 HBL1_DMSO_200M_050219_1,16909 HBL1_DMSO_200M_050219_1,16909,AIMPSALAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16910 81.495 8.2 6306900.0 25 0 962530.0 + 12680 GVLPNIQAV 9 73 455.7712203434208 909.5278877536416 2 455.7715026736259 MULTI CID FTMS 0 0 0 16908 6759382.5 0.1025757437800186 11 -0.9329605102539062 2 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 38.15118350030904 0.0856056900103839 3 [VG]APQA 6 4 37.668 0.0 0.0 4.1415 0.0 0.0 0.0 383.228031598193 383.228031598193 14.999795900778228 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.8494850021680094 [VG]APQA 4.1415 - 275 1 1.005 46304.1 1.0 11225 5683 16908 HBL1_DMSO_200M_050219_1,16910 HBL1_DMSO_200M_050219_1,16910,GVLPNIQAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16911 81.496 29.0 2985700.0 25 0 430140.0 + 3964 DALQGFKI 8 93 446.25047190755606 890.4863908819121 2 446.2506286501884 MULTI CID FTMS 0 0 0 16908 2140106.0 0.5462357352434642 -1 0.0869674682617187 3 Unmodified _DALQGFKI_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 50.855029805455786 0.1352255786796883 3 {[DA]|[EG]}{I|L}QG{M(Oxidation (M))|F}K{I|L} 8 0 + 65.277 0.0 0.0 7.3305 7.3305 92.337 0.0 0.0 0.0 39.36687333269264 12.914930551903232 12.914930551903232 9.262137858390822 0 0.8494850021680094 1.6989700043360187 0.0 0.7396518287104438 + + {[DA]|[EG]}{I|L}QG{M(Oxidation (M))|F}K{I|L};{[DA]|[EG]}{I|L}[AG]G{M(Oxidation (M))|F}K{I|L};WMKWK{I|L};WMK{I|L}KW 7.3305;6.2903;5.0287;3.0633 +;-;-;- + 178 + 1 1.005 71627.5 1.0 11226 5683 16908 HBL1_DMSO_200M_050219_1,16911 HBL1_DMSO_200M_050219_1,16911,DALQGFKI False True DALQGFKI 81.496207 446.250628650188 65939796.0 16908.0 ENSG00000125870|ENST00000246071|SNRPB2;;ENST00000407763.2_1_6:149433147-149433330:-|nuORF;;ENSG00000077312|ENST00000243563|SNRPA 6.38203239440918 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16912 81.497 22.0 1935400.0 25 0 187520.0 23711 LTTRPSESKT 10 70 560.3015923871525 1118.5886318411049 2 560.3021118044853 MULTI CID FTMS 0 0 0 16908 1737973.125 0.0074553779080541 26 -2.0731124877929688 4 Unmodified _LTTRPSESKT_ ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1 13.042465956692816 0.6287021003332052 3 TV{I|L} 3 9 19.693 0.0 0.0 1.7605 0.0 0.0 334.1743995186424 468.1922701471313 802.3666696657737 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 TV{I|L} 1.7605 - 69 + 1 1.005 37177.7 1.0 11227 5683 16908 HBL1_DMSO_200M_050219_1,16912 HBL1_DMSO_200M_050219_1,16912,LTTRPSESKT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16913 81.499 22.0 2051300.0 25 0 127850.0 + 25368 NAYEYFTKI 9 85 574.7844821998283 1147.5544114664565 2 574.7847167849541 MULTI CID FTMS 0 0 0 16908 1332292.125 0.1036025344550644 5 -0.4388275146484375 5 Unmodified _NAYEYFTKI_ ENSG00000030110|ENST00000374467|BAK1;nc|ENSG00000030110|Q16611-2|BAK1 16.149105407346934 0.3995459350917656 3 {[QG]|[NA]}YEQQT{I|L}D 9 4 31.719 0.0 0.0 2.764 0.0 0.0 0.0 82.06701837711171 82.06701837711171 10.759850300262414 0.0 0.0 0.0 0 0.8182503180159344 1.6989700043360187 0.7215141619232908 0.0 {[QG]|[NA]}YEQQT{I|L}D 2.764 - 174 + 1 1.005 41891.0 1.0 11228 5683 16908 HBL1_DMSO_200M_050219_1,16913 HBL1_DMSO_200M_050219_1,16913,NAYEYFTKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16914 81.5 52.0 1064200.0 25 0 54680.0 + 38320 TQLDLEDVQV 10 104 580.2967486627949 1158.5789443923898 2 580.2968017458916 MULTI CID FTMS 0 0 0 16908 933741.5625 0.7576841736907769 -1 0.0869674682617187 6 Unmodified _TQLDLEDVQV_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 38.61474834105838 0.1721950110283317 3 DE{I|L}DPQV 7 6 43.518 0.0 0.0 3.7562 0.0 0.0 344.2092480013874 0.0 344.2092480013874 0.0 30.10167911865537 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.7059771852360797 DE{I|L}DPQV 3.7562 - 954 + 1 1.005 48795.9 1.0 11229 5683 16908 HBL1_DMSO_200M_050219_1,16914 HBL1_DMSO_200M_050219_1,16914,TQLDLEDVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16915 81.502 118.0 1370100.0 25 0 176990.0 14412 IFKKAREDTR 10 107 632.3618154390267 1262.709077944853 2 632.3611938357353 MULTI CID FTMS 0 0 0 16908 871110.875 0.7794795466350858 1 -0.0960540771484375 7 Unmodified _IFKKAREDTR_ ENSG00000176102|ENST00000323959|CSTF3 10.073929032068715 0.6785112666868882 3 VVQ{[{M(Oxidation (M))|F}H]|[RQ]}HRV{[QN]|[E{I|L}]|[KN]} 10 10 VVQ{[{M(Oxidation (M))|F}H]|[RQ]}H + + 13.812 4.5693 0.61136 1.0939 1.0939 48.385 0.0 0.0 0.0 0.0 3.0552957374174667 0.0 0.0 0 0.0 0.0 0.0 0.0 VVQ{[{M(Oxidation (M))|F}H]|[RQ]}HRV{[QN]|[E{I|L}]|[KN]} 1.0939 - 331 + 1 1.005 125195.0 1.0 11230 5683 16908 HBL1_DMSO_200M_050219_1,16915 HBL1_DMSO_200M_050219_1,16915,IFKKAREDTR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16916 81.504 43.0 1745000.0 25 0 216490.0 + + 43895 KAMDDTFYL 9 102 552.2576542385987 1102.5007555439972 2 552.2578613162041 MULTI CID FTMS 0 0 0 16908 745851.625 0.7371426986581223 2 -0.1657867431640625 8 Unmodified _YFTSYFYL_ ENSG00000167136|ENST00000372642|ENDOG 34.18733598223924 0.3315367612694167 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QG]|[NA]}DT{M(Oxidation (M))|F}Y{I|L} 9 -1 + 46.264 0.0 0.0 4.1963 4.1963 75.6 0.0 0.0 0.0 3.468647834217009 14.973024840566469 3.468647834217009 3.468647834217009 0 0.5 1.154901959985743 0.6861818737241735 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QG]|[NA]}DT{M(Oxidation (M))|F}Y{I|L};[Q{I|L}]{[CT]|[{M(Oxidation (M))|F}G]}DT{M(Oxidation (M))|F}Y{I|L};[NP]AYDT{M(Oxidation (M))|F}Y{I|L};[{I|L}T]{[QC]|[C(Carbamidomethyl (C))A]}DT{M(Oxidation (M))|F}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[DS]|[MA]|[CV]|TT}DT{M(Oxidation (M))|F}Y{I|L};{[QN]|[E{I|L}]|[KN]}[RN]SM[EP]Q;[Q{I|L}][RD]SM[EP]Q;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}T[WC(Carbamidomethyl (C))]PV;[NP]AY{[RE]|[WV]}[EP]Q;[NP]AYD{[VA]|[{I|L}G]}[EP]Q 4.1963;3.8817;3.544;3.0015;2.5563;2.383;1.8524;1.375;0.086966;0.045462 -;-;-;-;-;-;-;-;-;- 426 1 1.005 63083.9 1.0 11231 5683 16908 HBL1_DMSO_200M_050219_1,16916 HBL1_DMSO_200M_050219_1,16916,YFTSYFYL False False KAMDDTFYL 81.503625 552.257861316204 22997548.0 16908.0 ENSG00000167136|ENST00000372642|ENDOG 4.387186288833618 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16917 81.505 76.0 1254900.0 25 0 425170.0 + 35586 STTVTLFKV 9 69 995.577426232884 994.570149766284 1 995.5776244997978 MULTI CID FTMS 0 0 0 16908 708244.6875 0.6377730028865467 -1 0.0869674682617187 9 Unmodified _STTVTLFKV_ nc|ENSG00000211899|P01871|IGHM 53.832793166522166 0.0319663582346103 3 G{M(Oxidation (M))|F}{I|L}T 4 8 32.912 0.0 0.0 3.3092 0.0 0.0 188.14340523679024 385.1743868463501 573.3177920831403 0.0 0.0 0.0 0.0 0 1.6549471895720984 0.0 1.424742501084005 0.0 G{M(Oxidation (M))|F}{I|L}T 3.3092 - 401 + 1 1.005 70968.6 1.0 11232 5683 16908 HBL1_DMSO_200M_050219_1,16917 HBL1_DMSO_200M_050219_1,16917,STTVTLFKV True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 16918 81.507 63.0 893140.0 25 0 117390.0 -1 YQRCKWEYQMI 11 73 782.358193485444 1562.7018340376878 2 782.3580200076103 MULTI CID FTMS 0 0 0 16908 603625.9375 0.2684418544950682 4 -0.31146240234375 10 Oxidation (M) _YQRCKWEYQM(Oxidation (M))I_ ENST00000527531.5_1_11:108253785-108256679:-|nuORF 3.2813086475875832 0.8596665074481906 3 [HD]EAQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 13 -1 + 44.449 0.0 0.0 2.8444 2.8444 67.651 0.0 0.0 0.0 2.928610398454161 28.94534021972916 2.928610398454161 0.6214790674884441 0 0.0 0.0 0.3807196863200844 0.0 [HD]EAQQDA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQQW{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQQDA{M(Oxidation (M))|F}Y[AG][{I|L}V];[HD]EAQ[AG]DA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EA[AG]QDA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQ[AG]W{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQQW{M(Oxidation (M))|F}Y[AG][{I|L}V];[HD]EA[AG]QW{M(Oxidation (M))|F}YQ[{I|L}V];[Y{M(Oxidation (M))|F}]D[WP]DA{M(Oxidation (M))|F}YQ[{I|L}V];[Y{M(Oxidation (M))|F}]D[WP]W{M(Oxidation (M))|F}YQ[{I|L}V] 2.8444;2.8046;2.2638;2.2638;2.2638;2.2224;2.2224;2.2224;1.848;1.8102 -;-;-;-;-;-;-;-;-;- 386 1 1.005 44532.7 1.0 11233 5683 16908 HBL1_DMSO_200M_050219_1,16918 HBL1_DMSO_200M_050219_1,16918,YQRCKWEYQMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16919 81.513 323.0 521750.0 25 0 121710.0 -1 FKLFVVCLLV 10 121 619.372037755788 1236.729522578376 2 619.3726074099541 MULTI CID FTMS 0 0 0 16908 574837.0 0.5671416324214337 -1 0.0869674682617187 11 Carbamidomethyl (C) _FKLFVVC(Carbamidomethyl (C))LLV_ ENST00000552056.5_1_12:76441358-76444342:-|nuORF 1.6526216038709556 0.7189921496796233 3 {I|L} 1 -1 10.0 0.0 0.0 0.80858 0.0 0.0 1105.6344430879446 0.0 1105.6344430879446 0.0 1.5903166748138098 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80858 + + 81 + 1 1.005 126182.8 1.0 11234 5683 16908 HBL1_DMSO_200M_050219_1,16919 HBL1_DMSO_200M_050219_1,16919,FKLFVVCLLV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16920 81.519 366.0 827850.0 25 0 99066.0 + 9303 FIFSDTHEL 9 190 554.7693373998666 1107.524121866533 2 554.7698852419853 MULTI CID FTMS 0 0 0 16908 478278.59375 0.2393366898099207 -3 0.2499008178710937 12 Unmodified _FIFSDTHEL_ ENSG00000102699|ENST00000381989|PARP4 54.773552608820026 0.0299037012502309 3 {[QV]|[N{I|L}]|[RA]|[KV]}DRDS{M(Oxidation (M))|F}{I|L}E 9 7 + 65.543 0.0 0.0 5.918 5.918 78.95 0.0 0.0 0.0 9.752888718036855 12.688324713653074 9.752888718036855 2.040456705222688 0 0.4247425010840047 1.6989700043360187 1.0994850021680094 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}DRDS{M(Oxidation (M))|F}{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}S[PS]DS{M(Oxidation (M))|F}{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}SD[PS]S{M(Oxidation (M))|F}{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}D[VG]DS{M(Oxidation (M))|F}{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}DRDYA{I|L}E;{[YC]|[HE]}SS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}SD[RD]{M(Oxidation (M))|F}{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}D[MN]{I|L}{M(Oxidation (M))|F}{I|L}E;[HT]DS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}S[PS]DYA{I|L}E 5.918;5.7337;5.1222;5.0865;5.0807;5.0374;4.9632;4.9558;4.9344;4.8964 -;-;-;-;-;-;-;-;-;- 4756 1 1.005 229729.1 1.0 11235 5683 16908 HBL1_DMSO_200M_050219_1,16920 HBL1_DMSO_200M_050219_1,16920,FIFSDTHEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16921 81.526 391.0 925410.0 25 0 91803.0 + 10299 FSAERLVEI 9 240 532.2932843826649 1062.5720158321296 2 532.2935668826103 MULTI CID FTMS 0 0 0 16908 451579.28125 1.0 0 0.0 13 Unmodified _FSAERLVEI_ ENSG00000182185|ENST00000471583|RAD51B;ENST00000553595.5_1_14:68331761-69149671:+|nuORF;nc|ENSG00000182185|O15315-1|RAD51B;nc|ENSG00000182185|O15315-4|RAD51B;nc|ENSG00000182185|O15315-5|RAD51B;nc|ENSG00000182185|O15315|RAD51B 57.24910588100465 0.0276051374632116 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ARE{I|L}V{I|L}E 9 4 + 57.789 0.0 0.0 5.4386 5.4386 81.492 0.0 0.0 0.0 7.283474859079391 4.843545039429586 4.843545039429586 4.843545039429586 0 0.778659694992122 2.0 0.8274509799928715 0.2396518287104437 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ARE{I|L}V{I|L}E;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ARE{I|L}VE{I|L};{M(Oxidation (M))|F}{I|L}V{I|L}ERAC{I|L};{M(Oxidation (M))|F}{I|L}V{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QS{I|L};{M(Oxidation (M))|F}{I|L}V{I|L}WWS{I|L};{M(Oxidation (M))|F}S{I|L}{M(Oxidation (M))|F}P[RP]S{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KP]YV{I|L}SE;{NN|[MP]|[D{I|L}]|[EV]}[KP]YSV{I|L}E;{M(Oxidation (M))|F}S{I|L}V[RN]QS{I|L};{M(Oxidation (M))|F}{I|L}VS[RN]QS{I|L} 5.4386;4.9828;4.7532;4.549;4.4461;4.1452;3.9745;3.9413;3.8499;3.8167 -;-;-;-;-;-;-;-;-;- 6968 1 1.005 280895.9 1.0 11236 5683 16908 HBL1_DMSO_200M_050219_1,16921 HBL1_DMSO_200M_050219_1,16921,FSAERLVEI True True FSAERLVEI 81.526492 532.29356688261 4868453.5 16908.0 nc|ENSG00000182185|O15315-5|RAD51B;;nc|ENSG00000182185|O15315-1|RAD51B;;nc|ENSG00000182185|O15315-4|RAD51B;;ENST00000553595.5_1_14:68331761-69149671:+|nuORF;;ENSG00000182185|ENST00000471583|RAD51B;;nc|ENSG00000182185|O15315|RAD51B 4.027836720148723 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16922 81.535 482.0 793000.0 25 0 70586.0 + 29542 QLPELFHKI 9 224 375.5537556797913 1123.639437639574 3 375.5537902712822 MULTI CID FTMS 0 0 0 16908 414636.71875 0.3431260715275061 -5 0.3903427124023437 14 Unmodified _QLPELFHKI_ ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-5|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2 38.17557092003332 0.0854718145212029 3 [EP]{I|L}{M(Oxidation (M))|F}HK{I|L}Q{I|L} 9 4 + 48.031 0.0 0.0 4.2746 4.2746 78.535 0.0 0.0 0.0 5.955612550363796 8.622851598334059 5.955612550363796 5.955612550363796 0 0.1989700043360188 1.3010299956639813 0.0 0.0 [EP]{I|L}{M(Oxidation (M))|F}HK{I|L}Q{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KEP{I|L}Q{I|L};[HK]{M(Oxidation (M))|F}{I|L}EP{I|L}Q{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}K{I|L}EP{I|L}Q{I|L};[EP]{I|L}{M(Oxidation (M))|F}HK{I|L}[AG]{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EKP{I|L}Q{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KE{I|L}PQ{I|L};[HK]{M(Oxidation (M))|F}{I|L}E{I|L}PQ{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}K{I|L}E{I|L}PQ{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KEP{I|L}[AG]{I|L} 4.2746;3.7445;3.5727;3.4766;3.4551;3.3199;3.2087;3.0369;2.9408;2.925 -;-;-;-;-;-;-;-;-;- 1802 1 1.005 306114.4 1.0 11237 5683 16908 HBL1_DMSO_200M_050219_1,16922 HBL1_DMSO_200M_050219_1,16922,QLPELFHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16923 81.542 410.0 415750.0 25 0 83114.0 28246 PQRRRDLKLYP 11 173 721.4212999011148 1440.8280468690295 2 721.4239379763603 MULTI CID FTMS 0 0 0 16908 262151.625 0.6769277348132994 3 -0.271270751953125 15 Unmodified _PQRRRDLKLYP_ ENST00000354050.8_2_20:44527440-44527479:-|nuORF 2.9952420565917617 0.861016188266951 3 [NP]{I|L}QGV 6 9 33.391 0.0 0.0 2.3175 0.0 0.0 0.0 829.473407547017 829.473407547017 15.598227434598329 0.0 0.0 0.0 0 0.0 0.0 0.0 1.0994850021680094 [NP]{I|L}QGV 2.3175 - 4049 1 1.005 125016.2 1.0 11238 5683 16908 HBL1_DMSO_200M_050219_1,16923 HBL1_DMSO_200M_050219_1,16923,PQRRRDLKLYP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 16924 81.55 454.0 340920.0 25 0 19954.0 -1 0 180 595.9307521178632 1784.7704269537894 3 596.2646972537041 MULTI CID FTMS 0 0 0 16908 270245.90625 0.5920967849164208 -3 0.2499008178710937 16 3 Y{M(Oxidation (M))|F}ANQQAE 8 -1 43.071 0.0 0.0 2.4133 0.0 0.0 358.2133545263753 472.1178988092407 830.331253335616 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.024227503252014 Y{M(Oxidation (M))|F}ANQQAE 2.4133 - 2549 + 1 1.005 126139.2 1.0 11239 5683 16908 HBL1_DMSO_200M_050219_1,16924 HBL1_DMSO_200M_050219_1,16924, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16925 81.56 554.0 550330.0 25 0 53749.0 + + 39239 TVTSDLLQV 9 218 488.2860714071832 974.5575898811665 2 488.2881652712822 MULTI CID FTMS 0 0 0 16908 212144.28125 0.6481478528807544 4 -0.31146240234375 17 Unmodified _VAAERLFLG_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 32.30548876998284 0.1201446275138228 3 {[TV]|[{I|L}S]}TSVTG{I|L}VV 10 -1 + 61.085 0.0 0.0 6.268 6.268 78.892 0.0 0.0 0.0 7.839570197596068 16.532125137753447 7.839570197596068 1.3835783861202415 0 0.5796896906561032 2.0 0.6237125054200234 0.0 {[TV]|[{I|L}S]}TSVTG{I|L}VV;{[TV]|[{I|L}S]}T[QP]{I|L}{M(Oxidation (M))|F}AV;{[TV]|[{I|L}S]}DT[KT]{I|L}VV;{[TV]|[{I|L}S]}TD[KT]{I|L}VV;{[TV]|[{I|L}S]}DTS[RV]VV;{[TV]|[{I|L}S]}TSV[W{I|L}]AV;{[TV]|[{I|L}S]}TDS[RV]VV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}Q{[VA]|[{I|L}G]}{M(Oxidation (M))|F}AV;{[TV]|[{I|L}S]}DTS{I|L}[K{I|L}]V;{[TV]|[{I|L}S]}TSVTVVAV 6.268;6.126;6.0199;5.7923;5.743;5.7019;5.5154;5.4636;5.4079;5.393 -;-;-;-;-;-;-;-;-;- 3521 1 1.005 228421.0 1.0 11240 5683 16908 HBL1_DMSO_200M_050219_1,16925 HBL1_DMSO_200M_050219_1,16925,VAAERLFLG False False TVTSDLLQV 81.560129 488.288165271282 2298613.5 16908.0 ENSG00000080345|ENST00000444746|RIF1;;nc|ENSG00000080345|Q5UIP0-2|RIF1 3.763738632202149 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16926 81.57 490.0 511820.0 25 0 19788.0 + -1 VLQCLVASSSL 11 213 588.8177705177919 1175.6209881023838 2 588.8188354372978 MULTI CID FTMS 0 0 0 16908 207829.015625 0.6085882734267734 -3 0.2499008178710937 18 Carbamidomethyl (C) _VLQC(Carbamidomethyl (C))LVASSSL_ REV__nc|ENSG00000079263|Q13342-4|SP140 17.11289562659939 0.6791789249425932 3 [NP]YGR[RV]DS{I|L} 10 -1 + 17.875 0.0 0.0 1.5204 1.5204 68.579 0.0 0.0 0.0 3.1695961380542297 1.67670847161709 1.67670847161709 1.9717085551702933 0 1.0138793319624575 0.0 0.1462566630072955 0.0 [NP]YGR[RV]DS{I|L};[W{M(Oxidation (M))|F}][RV]RP[C(Carbamidomethyl (C))R];[{I|L}P]Q[H{I|L}]RP[C(Carbamidomethyl (C))R];[NP]YGR[RV]DTV;[W{M(Oxidation (M))|F}][RV]RE{[{M(Oxidation (M))|F}H]|[RQ]};[{I|L}P]Q[H{I|L}]RE{[{M(Oxidation (M))|F}H]|[RQ]};[W{M(Oxidation (M))|F}][RV][VG]P[C(Carbamidomethyl (C))R];[W{M(Oxidation (M))|F}]P[TP]PR{I|L}Y;[W{M(Oxidation (M))|F}]P[TP]PRY{I|L};[{I|L}P]Q[H{I|L}][VG]P[C(Carbamidomethyl (C))R] 1.5204;1.3527;1.2332;0.94762;0.69082;0.57127;0.56487;0.48342;0.48342;0.44992 -;-;-;-;-;-;-;-;-;- 3461 + 1 1.005 187906.4 1.0 11241 5683 16908 HBL1_DMSO_200M_050219_1,16926 HBL1_DMSO_200M_050219_1,16926,VLQCLVASSSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16927 81.576 350.0 68561.0 25 0 18245.0 -1 0 53 818.1633378512681 3268.6242455386723 4 818.9183837771416 MULTI CID FTMS 0 0 0 16908 95141.828125 0.3379335334380697 -2 0.1490325927734375 19 3 {[HG]|PP}Q 3 -1 10.458 0.0 0.0 0.31994 0.0 0.0 0.0 2943.462507827988 2943.462507827988 5.853481135844875 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}Q 0.31994 - 28 1 1.005 28259.1 1.0 11242 5683 16908 HBL1_DMSO_200M_050219_1,16927 HBL1_DMSO_200M_050219_1,16927, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16928 81.586 540.0 420940.0 25 0 36446.0 + + 33693 MAIAIMKV 8 242 439.2545702534625 0 439.2542907595634 PEAK CID FTMS 0 0 0 16908 193652.59375 1.0 0 0.0 20 Unmodified _SIYTLPAL_ ENSG00000227500|ENST00000316097|SCAMP4;nc|ENSG00000227500|Q969E2-2|SCAMP4;ENST00000472442.2_1_19:1922970-1924280:+|nuORF 10.183394434864962 0.5394990767616434 3 {I|L}AV 3 -1 12.703 0.0 0.0 1.4493 0.0 0.0 201.0502456246149 389.2202547662719 590.2705003908868 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AV 1.4493 - 151 + 1 1.005 176455.3 1.0 11243 5683 16908 HBL1_DMSO_200M_050219_1,16928 HBL1_DMSO_200M_050219_1,16928,SIYTLPAL False False MAIAIMKV 81.585796 439.254290759563 776291.0625 16908.0 ENSG00000227500|ENST00000316097|SCAMP4;;nc|ENSG00000227500|Q969E2-2|SCAMP4;;ENST00000472442.2_1_19:1922970-1924280:+|nuORF 1.6051164865493774 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16930 81.59 1.2 30023000.0 25 0 1664500.0 -1 0 60 881.4140406640831 1760.8135283949662 2 881.4149047732353 MULTI CID FTMS 0 0 0 16929 39765396.0 0.9816760564965792 -2 0.1830215454101562 1 3 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}Y 12 -1 71.552 0.0 0.0 4.0636 0.0 0.0 0.0 355.2008324323287 355.2008324323287 53.13608784304506 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}Y 4.0636 - 543 1 1.005 33089.8 1.0 11244 5684 16929 HBL1_DMSO_200M_050219_1,16930 HBL1_DMSO_200M_050219_1,16930, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16931 81.591 2.2 24442000.0 25 0 2064600.0 + 44934 YPPWPGKIV 9 75 528.7980392882323 1055.5815256432645 2 528.7977783083916 MULTI CID FTMS 0 0 0 16929 21510920.0 0.861053383106575 -2 0.1830215454101562 2 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 50.855029805455786 0.0384952370514206 3 YPPW[PG]K{I|L}V 9 0 + 58.33 0.0 0.0 5.5258 5.5258 90.122 0.0 0.0 0.0 39.91342513155105 1.4703230897117976 1.4703230897117976 39.29352360053254 0 1.0941876774005248 2.0 0.0 0.0 + + YPPW[PG]K{I|L}V;[KG]P{I|L}[R{M(Oxidation (M))|F}]P{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]{I|L}[KG]P[HQ] 5.5258;1.8034;0.7172 +;-;- + 174 + 1 1.005 49748.3 1.0 11245 5684 16929 HBL1_DMSO_200M_050219_1,16931 HBL1_DMSO_200M_050219_1,16931,YPPWPGKIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16932 81.592 26.0 4654400.0 25 0 796140.0 + 9896 FPFYGKPMRI 10 68 419.2266611861339 1254.6581541586015 3 419.2267944216728 MULTI CID FTMS 0 0 0 16929 2448098.0 0.201116909968953 -8 0.5722427368164062 3 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 39.94969957227396 0.1580982266129622 3 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 69.646 0.0 0.0 5.551 0.0 0.0 119.07410628486484 0.0 119.07410628486484 0.0 47.427834771286186 0.0 0.0 0 0.9291746928241124 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.551 - 437 1 1.005 98741.9 1.0 11246 5684 16929 HBL1_DMSO_200M_050219_1,16932 HBL1_DMSO_200M_050219_1,16932,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16933 81.593 18.0 2836200.0 25 0 481960.0 18731 LALEGGHDL 9 70 462.7438414389623 923.4731299447244 2 462.7439758181572 MULTI CID FTMS 0 0 0 16929 2265985.75 0.4764241618792675 -2 0.1830215454101562 4 Unmodified _LALEGGHDL_ ENSG00000048052|ENST00000686413|HDAC9;ENSG00000061273|ENST00000080059|HDAC7;ENSG00000068024|ENST00000543185|HDAC4;ENSG00000108840|ENST00000682912|HDAC5;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;ENST00000490851.5_1_7:18832955-19035682:+|nuORF;ENST00000494800.1_1_2:239977015-240002822:-|nuORF;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000068024|P56524-2|HDAC4;nc|ENSG00000068024|P56524|HDAC4;nc|ENSG00000108840|Q9UQL6-2|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5 12.531546534597751 0.4974689918368763 3 [{I|L}A]P 3 7 34.705 0.0 0.0 3.7581 0.0 0.0 0.0 639.276913166145 639.276913166145 22.715299873086607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P 3.7581 - 6 + 1 1.005 45248.4 1.0 11247 5684 16929 HBL1_DMSO_200M_050219_1,16933 HBL1_DMSO_200M_050219_1,16933,LALEGGHDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16934 81.595 19.0 5015300.0 25 0 442950.0 + 2863 AVDLTLPKV 9 105 478.2948132439346 954.5750735546692 2 478.2949401736259 MULTI CID FTMS 0 0 0 16929 2218016.75 0.6881428651983139 3 -0.2154083251953125 5 Unmodified _AVDLTLPKV_ ENSG00000196419|ENST00000360079|XRCC6;ENST00000478914.1_1_22:42052971-42057696:+|nuORF;ENST00000518193.1_1_8:63767865-63768189:-|nuORF;nc|ENSG00000196419|P12956-2|XRCC6 32.78568957990786 0.1150597335874693 3 {[VA]|[{I|L}G]}D{I|L}T{I|L}PKV 9 0 + 58.25 0.0 0.0 6.1022 6.1022 82.254 0.0 0.0 0.0 24.68743159096622 7.087298416251748 7.087298416251748 3.802112417116064 0 0.7059771852360797 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}D{I|L}T{I|L}PKV;{[VA]|[{I|L}G]}D{I|L}T{I|L}KPV;{[VA]|[{I|L}G]}D{I|L}T{I|L}V[KP] 6.1022;5.7039;5.3597 +;-;- + 385 + 1 1.005 77673.6 1.0 11248 5684 16929 HBL1_DMSO_200M_050219_1,16934 HBL1_DMSO_200M_050219_1,16934,AVDLTLPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16935 81.596 21.0 1660200.0 25 0 120100.0 + 27375 PIDYYPQDK 9 67 569.7743475195995 1137.5341421059989 2 569.7745849490166 MULTI CID FTMS 0 0 0 16929 1731257.125 1.0 0 0.0 6 Unmodified _PIDYYPQDK_ REV__ENSG00000241973|ENST00000255882|PI4KA 7.910154910731844 0.6385446671287552 3 [{I|L}P]DY{M(Oxidation (M))|F} 5 -1 28.794 0.0 0.0 2.5313 0.0 0.0 0.0 499.2152417473855 499.2152417473855 15.143706775304564 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [{I|L}P]DY{M(Oxidation (M))|F} 2.5313 - 71 1 1.005 32748.9 1.0 11249 5684 16929 HBL1_DMSO_200M_050219_1,16935 HBL1_DMSO_200M_050219_1,16935,PIDYYPQDK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16936 81.597 34.0 1762300.0 25 0 180540.0 + 8685 EVITKFINV 9 105 531.8131510810317 1061.6117492288631 2 531.8136474490166 MULTI CID FTMS 0 0 0 16929 1314140.5 0.1197956453742493 -2 0.1830215454101562 7 Unmodified _EVITKFINV_ ENSG00000152689|ENST00000403687|RASGRP3;nc|ENSG00000152689|Q8IV61-2|RASGRP3 41.8396318013385 0.0653578398400075 3 {NN|[MP]|[D{I|L}]|[EV]}[VP]K[Y{I|L}]SK 9 5 + 39.614 0.0 0.0 3.7315 3.7315 79.011 0.0 0.0 0.0 1.0092329426595086 9.770952876546303 1.0092329426595086 8.17838433125824 0 0.3807196863200844 2.0 0.2215141619232908 0.0 {NN|[MP]|[D{I|L}]|[EV]}[VP]K[Y{I|L}]SK;[KT]{M(Oxidation (M))|F}{I|L}{I|L}{[CP]|[EA]}{I|L}K;[KT]{M(Oxidation (M))|F}{I|L}{I|L}[EP]SK;[KT]{I|L}{M(Oxidation (M))|F}{I|L}{[CP]|[EA]}{I|L}K;[KT]{I|L}{M(Oxidation (M))|F}{I|L}[EP]SK;[KT]{M(Oxidation (M))|F}{I|L}{I|L}D[TP]K;[KT]{M(Oxidation (M))|F}{I|L}D[TP]{I|L}K;[KT]{I|L}{M(Oxidation (M))|F}{I|L}D[TP]K;[{I|L}T]K{M(Oxidation (M))|F}{I|L}{[CP]|[EA]}{I|L}K;[{I|L}T]K{M(Oxidation (M))|F}{I|L}[EP]SK 3.7315;2.9611;2.9383;2.7977;2.7749;2.7712;2.6091;2.6079;2.5072;2.4844 -;-;-;-;-;-;-;-;-;- 899 1 1.005 53806.9 1.0 11250 5684 16929 HBL1_DMSO_200M_050219_1,16936 HBL1_DMSO_200M_050219_1,16936,EVITKFINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16937 81.598 45.0 2093500.0 25 0 314330.0 + 10916 GAIQVLPKL 9 93 469.8053292089628 937.5961054847256 2 469.8052856326103 MULTI CID FTMS 0 0 0 16929 1244824.125 0.9996360248655444 -2 0.1830215454101562 8 Unmodified _GAIQVLPKL_ ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2 54.773552608820026 0.0299037012502309 3 [Q{I|L}]QV{I|L}{I|L}SA 8 5 44.097 0.0 0.0 4.7032 0.0 0.0 0.0 82.06702600650624 82.06702600650624 25.14435991220679 0.0 0.0 0.0 0 1.024227503252014 0.0 1.305462187404089 0.4247425010840047 [Q{I|L}]QV{I|L}{I|L}SA 4.7032 - 248 + 1 1.005 78835.4 1.0 11251 5684 16929 HBL1_DMSO_200M_050219_1,16937 HBL1_DMSO_200M_050219_1,16937,GAIQVLPKL True True GAIQVLPKL 81.598225 469.80528563261 28862922.0 16929.0 nc|ENSG00000069424|Q13303-4|KCNAB2;;nc|ENSG00000069424|Q13303-2|KCNAB2;;ENSG00000069424|ENST00000378083|KCNAB2;;nc|ENSG00000069424|Q13303|KCNAB2 3.87995711962382 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16938 81.599 25.0 2143600.0 25 0 244630.0 + + 27877 RQLDSMIQL 9 73 552.2963752952535 1102.5781976573069 2 552.2973510622978 MULTI CID FTMS 0 0 0 16929 1077850.125 0.5986304424524657 -2 0.1830215454101562 9 Unmodified _PLSFDRQQI_ nc|ENSG00000138376|Q99728-2|BARD1;nc|ENSG00000138376|Q99728-4|BARD1;ENSG00000138376|ENST00000260947|BARD1 16.942295170755138 0.3780752226737986 3 [Q{I|L}][RD]SM{I|L}Q{I|L} 9 -1 + 28.451 0.0 0.0 2.5804 2.5804 71.155 0.0 0.0 0.0 2.4202997895334057 14.471420311620436 2.4202997895334057 3.0102999566398125 0 0.5317183090963749 0.0 0.0 0.0 [Q{I|L}][RD]SM{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[RN]SM{I|L}Q{I|L} 2.5804;2.3074 -;- 60 1 1.005 48485.4 1.0 11252 5684 16929 HBL1_DMSO_200M_050219_1,16938 HBL1_DMSO_200M_050219_1,16938,PLSFDRQQI False False RQLDSMIQL 81.599404 552.297351062298 13532432.0 16929.0 nc|ENSG00000138376|Q99728-2|BARD1;;nc|ENSG00000138376|Q99728-4|BARD1;;ENSG00000138376|ENST00000260947|BARD1 2.5502004623413086 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16939 81.601 81.0 1179500.0 25 0 189740.0 + 33976 SLIGHLQTL 9 116 491.2901470571099 980.5657411810198 2 491.2903015017509 MULTI CID FTMS 0 0 0 16929 718021.375 0.6545209024553602 -2 0.1830215454101562 10 Unmodified _SLIGHLQTL_ ENSG00000138166|ENST00000369583|DUSP5 43.77239144664712 0.0547478964384323 3 [H{I|L}]G{I|L}QTVT{I|L} 9 5 + 36.647 0.0 0.0 3.7373 3.7373 70.939 0.0 0.0 0.0 1.4612803567823818 7.191964632593589 1.4612803567823818 1.4612803567823818 0 0.6237125054200234 0.0 0.3054621874040891 0.3252574989159953 [H{I|L}]G{I|L}QTVT{I|L};{[HG]|PP}{I|L}{I|L}QTVT{I|L};[H{I|L}]GQ{I|L}TVT{I|L};{[QN]|[E{I|L}]|[KN]}HK{I|L}QT{I|L};{[HG]|PP}{I|L}Q{I|L}TVT{I|L};[H{I|L}]GQT{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}HKAAVT{I|L};{[TV]|[{I|L}S]}{I|L}HG{I|L}QT{I|L};{[TV]|[{I|L}S]}{I|L}H[QA]VT{I|L};{[HG]|PP}{I|L}QT{I|L}VT{I|L} 3.7373;3.5883;3.3315;3.2464;3.1825;2.8984;2.8449;2.8202;2.7506;2.7493 -;-;-;-;-;-;-;-;-;- 958 1 1.005 79091.6 1.0 11253 5684 16929 HBL1_DMSO_200M_050219_1,16939 HBL1_DMSO_200M_050219_1,16939,SLIGHLQTL True True SLIGHLQTL 81.601239 491.290301501751 7719463.5 16929.0 ENSG00000138166|ENST00000369583|DUSP5 3.264426867167155 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16940 81.602 46.0 1164200.0 25 0 207570.0 32498 SALGYLHSL 9 82 480.7609550957986 959.5073572583972 2 480.7576476931572 MULTI CID FTMS 0 0 0 16929 473361.6875 0.1661526407868424 -2 0.1830215454101562 11 Unmodified _SALGYLHSL_ ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1 20.453626601364224 0.2830276176381075 3 {[DA]|[EG]}{I|L}N 4 7 17.703 0.0 0.0 1.845 0.0 0.0 0.0 543.2909625652909 543.2909625652909 0.8040747723590123 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}{I|L}N 1.845 - 148 1 1.005 46328.7 1.0 11254 5684 16929 HBL1_DMSO_200M_050219_1,16940 HBL1_DMSO_200M_050219_1,16940,SALGYLHSL False True SAIGYLHSL 81.602491 480.757647693157 69691266.0 16929.0 nc|ENSG00000101049|Q9HBY8-3|SGK2;;nc|ENSG00000101049|Q9HBY8-1|SGK2;;ENSG00000101049|ENST00000373100|SGK2 0.9331939220428468 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16941 81.608 301.0 458950.0 25 0 43310.0 38005 TNYDLCTVCY 10 160 597.7438523877553 1193.4731518423105 2 597.7444946169853 MULTI CID FTMS 0 0 0 16929 445550.40625 0.5864911599010482 -2 0.1830215454101562 12 Unmodified _TNYDLCTVCY_ ENSG00000101752|ENST00000261537|MIB1;ENST00000578646.5_1_18:19285077-19371317:+|nuORF 8.155526934196011 0.6889124077178598 3 YVTNT{M(Oxidation (M))|F}{I|L} 7 8 22.656 0.0 0.0 1.8983 0.0 0.0 337.0406666486344 0.0 337.0406666486344 0.0 4.00346615030573 0.0 0.0 0 0.7429928190999391 0.0 0.4247425010840047 0.0 YVTNT{M(Oxidation (M))|F}{I|L} 1.8983 - 644 1 1.005 104270.5 1.0 11255 5684 16929 HBL1_DMSO_200M_050219_1,16941 HBL1_DMSO_200M_050219_1,16941,TNYDLCTVCY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16942 81.615 388.0 432910.0 25 0 68157.0 27066 PERTPLQRKL 10 113 413.2503599926893 1236.729250578268 3 413.2504455447197 MULTI CID FTMS 0 0 0 16929 448566.40625 0.9246807273516232 -1 0.0960540771484375 13 Unmodified _PERTPLQRKL_ ENSG00000074370|ENST00000397041|ATP2A3;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3 1.4819007175156935 0.719781833666733 3 {I|L} 1 9 10.089 0.0 0.0 0.81575 0.0 0.0 1105.6341558290476 0.0 1105.6341558290476 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.81575 + + 28 + 1 1.005 137286.9 1.0 11256 5684 16929 HBL1_DMSO_200M_050219_1,16942 HBL1_DMSO_200M_050219_1,16942,PERTPLQRKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16943 81.62 294.0 240280.0 25 0 14562.0 + 19541 LFPRNFRLIH 10 124 656.8879624908211 1311.761372048442 2 656.8885375857353 MULTI CID FTMS 0 0 0 16929 403419.28125 0.3741164685566265 -2 0.1830215454101562 14 Unmodified _LFPRNFRLIH_ REV__ENSG00000100665|ENST00000557004|SERPINA4 3.944395688203298 0.708391353636983 3 {I|L} 1 -1 11.42 0.0 0.0 0.87058 0.0 0.0 1180.6662925580108 0.0 1180.6662925580108 0.0 7.925133260145909 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.87058 + + 172 + 1 1.005 62149.0 1.0 11257 5684 16929 HBL1_DMSO_200M_050219_1,16943 HBL1_DMSO_200M_050219_1,16943,LFPRNFRLIH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16944 81.627 394.0 502600.0 25 0 64417.0 + 4634 DAYVLPKL 8 141 459.7681889261383 917.5218249190766 2 459.7690307497978 MULTI CID FTMS 0 0 0 16929 382895.53125 0.0084131666529118 24 -1.9196014404296875 15 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 39.957323273325 0.2350051964751539 3 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 + 58.868 0.0 0.0 6.416 6.416 91.397 0.0 0.0 0.0 21.740247145042066 13.399480616943508 13.399480616943508 15.740312677277188 0 1.055462187404089 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L};{[DA]|[EG]}YV{I|L}{I|L}[KP];[PS][YT]{I|L}PK{I|L};[PS][YT]{I|L}{I|L}[KP] 6.416;4.7005;2.819;1.1035 +;-;-;- + 337 + 1 1.005 154105.4 1.0 11258 5684 16929 HBL1_DMSO_200M_050219_1,16944 HBL1_DMSO_200M_050219_1,16944,DAYVLPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16945 81.632 260.0 232210.0 25 0 26452.0 -1 0 111 898.0558010090274 0 898.1008788943291 PEAK CID FTMS 0 0 0 16929 55685.65625 0.7312614462158789 -1 0.0960540771484375 16 3 {I|L}Q{I|L}{I|L}SVP 7 -1 41.733 0.0 0.0 2.3261 0.0 0.0 914.586564320986 126.02018152408438 1040.6067458450705 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6307196863200843 0.0 {I|L}Q{I|L}{I|L}SVP 2.3261 - 903 + 1 1.005 43222.0 1.0 11259 5684 16929 HBL1_DMSO_200M_050219_1,16945 HBL1_DMSO_200M_050219_1,16945, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16946 81.64 458.0 622970.0 25 0 71222.0 -1 0 164 358.73902572556904 715.4634985179381 2 358.7385742068291 MULTI CID FTMS 0 0 0 16929 325999.8125 0.4668429441338322 -2 0.1830215454101562 17 3 {M(Oxidation (M))|F}{I|L}{I|L}PKV 6 -1 + 37.538 0.0 0.0 5.2466 5.2466 77.006 0.0 0.0 0.0 13.812281309285623 2.2847932851536967 2.2847932851536967 2.2847932851536967 0 0.3252574989159953 0.0 0.0 0.2059771852360797 {M(Oxidation (M))|F}{I|L}{I|L}PKV;{M(Oxidation (M))|F}{I|L}{I|L}PVK;{M(Oxidation (M))|F}{I|L}{I|L}VPK;{M(Oxidation (M))|F}{I|L}VKP{I|L};{M(Oxidation (M))|F}{I|L}V{I|L}PK 5.2466;4.9273;4.0253;3.7128;2.6916 -;-;-;-;- 237 + 1 1.005 221448.3 1.0 11260 5684 16929 HBL1_DMSO_200M_050219_1,16946 HBL1_DMSO_200M_050219_1,16946, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16947 81.646 301.0 136160.0 25 0 5264.1 + 31687 RRLKKKKLIKV 11 91 705.5138427615166 0 705.5138427615166 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _RRLKKKKLIKV_ REV__ENSG00000118046|ENST00000326873|STK11;REV__ENST00000586358.5_1_19:1207098-1220516:+|nuORF;REV__ENST00000589152.5_1_19:1206825-1221398:+|nuORF;REV__nc|ENSG00000118046|Q15831-2|STK11 0.0 0.4761840153648598 3 N 1 -1 6.5714 0.0 0.0 0.46638 0.0 0.0 1126.8438343494015 165.10398279361564 1291.9478171430171 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 N 0.46638 - 19 + 1 1.005 37902.4 1.0 11261 5684 16929 HBL1_DMSO_200M_050219_1,16947 HBL1_DMSO_200M_050219_1,16947,RRLKKKKLIKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16948 81.653 330.0 328700.0 25 0 92535.0 + 37611 TLKWRISLHW 10 122 670.3877724846369 1338.7609920360735 2 670.3866454958916 MULTI CID FTMS 0 0 0 16929 253407.828125 0.1424679579979878 15 -1.1877670288085938 19 Unmodified _TLKWRISLHW_ REV__ENST00000311177.6_1_17:46698590-46699007:-|nuORF 6.723162845929126 0.6955379296933136 3 TT{M(Oxidation (M))|F}W 4 -1 29.31 0.0 0.0 2.1894 0.0 0.0 785.5064887175175 0.0 785.5064887175175 0.0 10.893943874995172 0.0 0.0 0 0.0 0.0 0.8252574989159953 0.0 TT{M(Oxidation (M))|F}W 2.1894 - 741 + 1 1.005 81420.7 1.0 11262 5684 16929 HBL1_DMSO_200M_050219_1,16948 HBL1_DMSO_200M_050219_1,16948,TLKWRISLHW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16949 81.655 111.0 239030.0 25 0 32923.0 + -1 LVNRLMSRFR 10 56 654.3745547642033 1306.7345565952064 2 654.3751708865166 MULTI CID FTMS 0 0 0 16929 228096.84375 0.1765083338177835 18 -1.4227142333984375 20 Oxidation (M) _LVNRLM(Oxidation (M))SRFR_ REV__ENSG00000094963|ENST00000209929|FMO2;REV__ENST00000209929.9_1_1:171154426-171178089:+|nuORF 1.4819007175156935 0.719781833666733 3 {I|L} 1 -1 11.259 0.0 0.0 0.86162 0.0 0.0 1175.6395533987204 0.0 1175.6395533987204 0.0 5.774509799928715 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.86162 + + 3 + 1 1.005 28494.8 1.0 11263 5684 16929 HBL1_DMSO_200M_050219_1,16949 HBL1_DMSO_200M_050219_1,16949,LVNRLMSRFR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16951 81.66 2.9 19738000.0 25 0 2139200.0 + 40988 VMAPRTLLL 9 65 507.3124166869351 1012.6102804406702 2 507.3127929568291 MULTI CID FTMS 0 0 0 16950 25845104.0 0.857641962319389 1 -0.1054840087890625 1 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 36.506200033944 0.094635877243972 3 VMA 3 6 55.445 0.0 0.0 5.4755 0.0 0.0 0.0 708.4431126372107 708.4431126372107 23.450528104279016 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMA 5.4755 + + 63 + 1 1.005 49059.1 1.0 11264 5685 16950 HBL1_DMSO_200M_050219_1,16951 HBL1_DMSO_200M_050219_1,16951,VMAPRTLLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16952 81.661 49.0 1101000.0 25 0 78491.0 + 15600 IPYQDLPHL 9 71 548.2950953149975 1094.575637696795 2 548.2954589724541 MULTI CID FTMS 0 0 0 16950 1191655.125 0.2138803707339539 4 -0.330108642578125 2 Unmodified _IPYQDLPHL_ ENSG00000074416|ENST00000265052|MGLL;ENST00000479967.5_1_3:127434467-127541990:-|nuORF;nc|ENSG00000074416|Q99685-2|MGLL;nc|ENSG00000074416|Q99685|MGLL 53.832793166522166 0.0319663582346103 3 {I|L}PYQD{I|L}PH{I|L} 9 0 + 87.049 0.0 0.0 7.9528 7.9528 95.159 0.0 0.0 0.0 53.86168767277148 9.621892823592972 9.621892823592972 14.208187539523747 0 1.075257498915995 1.5228787452803376 0.3494850021680094 0.5 + + {I|L}PYQD{I|L}PH{I|L};{I|L}PY[AG]D{I|L}PH{I|L};{I|L}{I|L}{M(Oxidation (M))|F}QD{I|L}PH{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[AG]D{I|L}PH{I|L} 7.9528;6.6547;6.2165;4.9184 +;-;-;- + 288 + 1 1.005 48930.3 1.0 11265 5685 16950 HBL1_DMSO_200M_050219_1,16952 HBL1_DMSO_200M_050219_1,16952,IPYQDLPHL True True IPYQDLPHL 81.660949 548.295458972454 256681200.0 16950.0 ENSG00000074416|ENST00000265052|MGLL;;nc|ENSG00000074416|Q99685-2|MGLL;;nc|ENSG00000074416|Q99685|MGLL;;ENST00000479967.5_1_3:127434467-127541990:-|nuORF 7.495529492696126 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16953 81.662 26.0 5555500.0 25 0 648490.0 + + 23865 RAIELLEKL 9 113 542.8395132948835 1083.664473656567 2 542.8401367068291 MULTI CID FTMS 0 0 0 16950 2990173.5 0.4106201776385381 -1 0.069732666015625 3 Unmodified _LVKQLNEKL_ ENSG00000148943|ENST00000278193|LIN7C;ENSG00000111052|ENST00000552864|LIN7A 47.74868867922204 0.0453060283459952 3 [{I|L}V]V[RD]{I|L}EK{I|L} 9 -1 + 59.949 0.0 0.0 5.532 5.532 57.529 0.0 0.0 0.0 0.5115252244738144 11.382104921644457 0.5115252244738144 0.0 0 0.8494850021680094 1.0969100130080565 0.0 0.6382104921644451 [{I|L}V]V[RD]{I|L}EK{I|L};[{I|L}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}EK{I|L};VV{I|L}[RD]{I|L}EK{I|L};VV[RD]{I|L}{I|L}EK{I|L};[{I|L}V]{[CP]|[EA]}G{I|L}{I|L}TR{I|L};VV[DV]G{I|L}{I|L}TR{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KP]{I|L}{I|L}EK{I|L};{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}G{I|L}{I|L}EK{I|L};[{I|L}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}TR{I|L};{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}G{I|L}{I|L}TR{I|L} 5.532;5.532;5.4848;5.4848;5.1987;5.1514;5.0918;4.6848;4.5398;3.6926 -;-;-;-;-;-;-;-;-;- 513 1 1.005 109449.8 1.0 11266 5685 16950 HBL1_DMSO_200M_050219_1,16953 HBL1_DMSO_200M_050219_1,16953,LVKQLNEKL False False RAIELLEKL 81.662126 542.840136706829 46525536.0 16950.0 ENSG00000148943|ENST00000278193|LIN7C;;ENSG00000111052|ENST00000552864|LIN7A 0.9898237536350886 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16954 81.663 46.0 1727400.0 25 0 268450.0 + 9217 FGIDLDTRV 9 76 518.2776553890703 1034.5407578449406 2 518.2773315310478 MULTI CID FTMS 0 0 0 16950 1256536.25 0.3008622753774138 3 -0.273040771484375 4 Unmodified _FGIDLDTRV_ ENSG00000033050|ENST00000287844|ABCF2;ENST00000465687.1_1_3:88367275-88367665:+|nuORF;nc|ENSG00000285292|Q9UG63-2|ABCF2 33.4449034751529 0.1114409586740657 3 {M(Oxidation (M))|F}VAD{I|L}V[VS]W 9 6 + 72.898 0.0 0.0 7.0464 7.0464 85.207 0.0 0.0 0.0 50.90797194541551 4.5669497181587815 4.5669497181587815 3.8464343345171415 0 1.305462187404089 1.2218487496163564 0.0 0.0 {M(Oxidation (M))|F}VAD{I|L}V[VS]W;{M(Oxidation (M))|F}VAD{I|L}[TA]{I|L}W;{M(Oxidation (M))|F}VKD{I|L}D{I|L}W;{M(Oxidation (M))|F}VW{I|L}[TA]{I|L}W;{M(Oxidation (M))|F}G{I|L}D{I|L}DRS{I|L};{M(Oxidation (M))|F}VAV[VS]D{I|L}W;{M(Oxidation (M))|F}VAD{I|L}DT[RV];{M(Oxidation (M))|F}VAVEV[VS]W;{M(Oxidation (M))|F}VAD{I|L}DRS{I|L};{M(Oxidation (M))|F}VW{I|L}V[VS]W 7.0464;6.6746;6.6211;6.5317;6.4466;6.3836;6.3163;6.2721;6.1556;6.1249 -;-;-;-;-;-;-;-;-;- 594 + 1 1.005 64828.2 1.0 11267 5685 16950 HBL1_DMSO_200M_050219_1,16954 HBL1_DMSO_200M_050219_1,16954,FGIDLDTRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16955 81.665 82.0 2284200.0 25 0 384560.0 -1 LPPCPEDI 8 113 470.7265013201815 939.438449707163 2 470.7264587283134 MULTI CID FTMS 0 0 0 16950 1251590.125 0.3102752977477036 -1 0.069732666015625 5 Carbamidomethyl (C) _LPPC(Carbamidomethyl (C))PEDI_ ENSG00000148337|ENST00000372938|CIZ1;ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-2|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-5|CIZ1 24.67388899826682 0.525179942228231 3 {I|L}A{I|L} 3 -1 46.682 0.0 0.0 4.9692 0.0 0.0 0.0 639.2119971304992 639.2119971304992 28.6651834146679 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}A{I|L} 4.9692 - 127 + 1 1.005 144949.9 1.0 11268 5685 16950 HBL1_DMSO_200M_050219_1,16955 HBL1_DMSO_200M_050219_1,16955,LPPCPEDI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16956 81.668 111.0 832760.0 25 0 64723.0 + 3350 AYPEIVAVY 9 110 512.7711662434562 1023.5277795537124 2 512.7707397341728 MULTI CID FTMS 0 0 0 16950 1173622.75 0.4493660762565499 -4 0.3148193359375 6 Unmodified _AYPEIVAVY_ ENSG00000178295|ENST00000381254|GEN1 23.1484247019978 0.2366544122328345 3 [EP]{I|L}VAAYVY 9 4 + 48.566 0.0 0.0 4.745 4.745 54.794 0.0 0.0 0.0 13.300756084811807 26.131803361406828 13.300756084811807 0.0 0 0.8935078169319297 0.8538719643217619 0.0 0.0 [EP]{I|L}VAAYVY;[EP]{I|L}VAYAVY;[EP]{I|L}AVYAVY;[EP]{I|L}AVAYVY;[EP]{I|L}G{I|L}AYVY;[EP]{I|L}G{I|L}YAVY;[EP]{I|L}VAVAYY;[EP]{I|L}AYVAVY;[EP]{I|L}VAAVYY;[EP]{I|L}AVVAYY 4.745;4.745;4.4509;4.4509;4.1568;4.1568;4.0844;3.8627;3.7903;3.7903 -;-;-;-;-;-;-;-;-;- 833 1 1.005 78318.5 1.0 11269 5685 16950 HBL1_DMSO_200M_050219_1,16956 HBL1_DMSO_200M_050219_1,16956,AYPEIVAVY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16957 81.672 263.0 958880.0 25 0 180180.0 -1 ALLETYCA 8 126 314.15316800795216 0 314.1530334353447 PEAK CID FTMS 0 0 0 16950 1006214.625 0.3241805816173241 -1 0.069732666015625 7 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 32.30548876998284 0.2094692153732555 3 KM 2 -1 7.0783 0.0 0.0 1.1302 0.0 0.0 201.0954157504762 163.05201135806877 364.147427108545 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KM 1.1302 - 18 + 1 1.005 201281.0 1.0 11270 5685 16950 HBL1_DMSO_200M_050219_1,16957 HBL1_DMSO_200M_050219_1,16957,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16958 81.677 265.0 930630.0 25 0 73742.0 27973 PLVTPMVALV 10 162 520.3144726798404 1038.614392426481 2 520.3151122927666 MULTI CID FTMS 0 0 0 16950 901294.9375 0.5611773006149293 5 -0.4105453491210937 8 Unmodified _PLVTPMVALV_ ENSG00000179094|ENST00000317276|PER1 39.957323273325 0.1580177220464651 3 {I|L}PPE{I|L}{I|L}MKV 9 8 + 90.906 0.0 0.0 8.7526 8.7526 97.918 0.0 0.0 0.0 39.38791753802987 12.587418566968154 12.587418566968154 34.72016505986112 0 1.7302046884880935 2.0 0.3494850021680094 0.6109243748081782 {I|L}PPE{I|L}{I|L}MKV;{I|L}PV[HA]{I|L}YKV;{I|L}PV[HA]PPVP{I|L};{I|L}PV[HA]PP{I|L}PV;{I|L}{I|L}TR{M(Oxidation (M))|F}YKV;{I|L}{I|L}TK{M(Oxidation (M))|F}{I|L}SA{M(Oxidation (M))|F};{I|L}V[YR]VYKV;{I|L}VP[HA]{I|L}YKV;{I|L}{I|L}TK{M(Oxidation (M))|F}YGVV;{I|L}{I|L}TK{I|L}[HD]TV 8.7526;5.4097;3.3896;3.3429;3.3036;3.1672;3.0803;2.7852;2.5916;2.5865 -;-;-;-;-;-;-;-;-;- 1970 + 1 1.005 198827.0 1.0 11271 5685 16950 HBL1_DMSO_200M_050219_1,16958 HBL1_DMSO_200M_050219_1,16958,PLVTPMVALV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16959 81.683 320.0 624280.0 25 0 69012.0 37440 TLDHGLAAE 9 167 309.4904109860205 925.4494035582616 3 309.4900390505791 MULTI CID FTMS 0 0 0 16950 778365.125 0.6182065785281732 -1 0.069732666015625 9 Unmodified _TLDHGLAAE_ ENSG00000147180|ENST00000674551|ZNF711;nc|ENSG00000147180|Q9Y462-2|ZNF711;nc|ENSG00000147180|Q9Y462|ZNF711 16.942295170755138 0.3780752226737986 3 [{I|L}A]P 3 7 22.676 0.0 0.0 2.4503 0.0 0.0 0.0 641.2513194120303 641.2513194120303 4.030899869919434 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]P 2.4503 - 361 1 1.005 161173.7 1.0 11272 5685 16950 HBL1_DMSO_200M_050219_1,16959 HBL1_DMSO_200M_050219_1,16959,TLDHGLAAE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16960 81.688 262.0 1145200.0 25 0 188230.0 + 32610 SAWSGAPMI 9 158 919.4326176398174 918.4253411732174 1 919.434130847454 MULTI CID FTMS 0 0 0 16950 736615.8125 0.5800680596742247 2 -0.1456756591796875 10 Unmodified _SAWSGAPMI_ ENSG00000146909|ENST00000275820|NOM1;ENST00000472491.1_1_7:156754865-156756721:+|nuORF;ENST00000475176.1_1_7:156754853-156755974:+|nuORF 88.90359156742426 0.0153595091083554 3 {[SA]|[TG]}GSAWPM{I|L} 9 3 + 65.753 0.0 0.0 7.1594 7.1594 80.275 0.0 0.0 0.0 7.397194722104487 14.973024840566469 7.397194722104487 0.6552798240840332 0 1.424742501084005 0.6020599913279624 2.3045970543767123 0.0 {[SA]|[TG]}GSAWPM{I|L};{[SA]|[TG]}WGSAPM{I|L};{[SA]|[TG]}WSGAPM{I|L};{[SA]|[TG]}GSWAPM{I|L};{[SA]|[TG]}GWSAPM{I|L};{[SA]|[TG]}WSQPM{I|L};{[QS]|[NT]}SAWPM{I|L};[PG]GGSG{M(Oxidation (M))|F}PM{I|L};{[QS]|[NT]}SWAPM{I|L};[PG]NSG{M(Oxidation (M))|F}PM{I|L} 7.1594;7.088;7.071;7.0525;6.59;6.5295;6.3539;6.3394;6.2471;6.1477 -;-;+;-;-;-;-;-;-;- + 3176 1 1.005 192599.3 1.0 11273 5685 16950 HBL1_DMSO_200M_050219_1,16960 HBL1_DMSO_200M_050219_1,16960,SAWSGAPMI True True SAWSGAPMI 81.688074 919.434130847454 19281616.0 16950.0 ENSG00000146909|ENST00000275820|NOM1;;ENST00000475176.1_1_7:156754853-156755974:+|nuORF;;ENST00000472491.1_1_7:156754865-156756721:+|nuORF 7.8651917775472 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16961 81.694 341.0 784140.0 25 0 94907.0 + 44086 YIYDKDMEII 10 179 651.8178823417203 1301.6212117502405 2 651.8185302615166 MULTI CID FTMS 0 0 0 16950 546691.0625 0.1426632024106743 -3 0.2527542114257812 11 Unmodified _YIYDKDMEII_ ENSG00000124422|ENST00000261497|USP22;nc|ENSG00000124422|Q9UPT9-2|USP22 73.1962812333195 0.0188336640735478 3 [Y{I|L}]YDKDME{I|L}{I|L} 10 0 + 82.389 0.0 0.0 6.3297 6.3297 82.869 0.0 0.0 0.0 3.641303353600094 6.17423111099761 3.641303353600094 3.641303353600094 0 1.8539171939081167 2.0 0.6505149978319906 0.0 + + [Y{I|L}]YDKDME{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}YDME{I|L}Y{I|L}{I|L};[MD]EKDY{I|L}Y{I|L}{I|L};[Y{I|L}]YD[QP]DY{I|L}{I|L};[MD]EK{I|L}DYY{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DYME{I|L}Y{I|L}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}KDME{I|L}Y{I|L}{I|L};[Y{I|L}]Y[YE]YY{I|L}{I|L};[Y{I|L}]YD[NP]EY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}MDKDYY{I|L}{I|L} 6.3297;6.0499;5.7173;5.6864;5.6409;5.5688;5.5688;5.5109;5.4551;5.3676 +;-;-;-;-;-;-;-;-;- + 14618 1 1.005 206564.8 1.0 11274 5685 16950 HBL1_DMSO_200M_050219_1,16961 HBL1_DMSO_200M_050219_1,16961,YIYDKDMEII True True YIYDKDMEII 81.694253 651.818530261517 159339472.0 16950.0 ENSG00000124422|ENST00000261497|USP22;;nc|ENSG00000124422|Q9UPT9-2|USP22 4.720937410990397 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16962 81.701 352.0 671620.0 25 0 66650.0 + 45608 YVISEGFLKA 10 195 563.8110579281387 1125.6075629230772 2 563.8112670779228 MULTI CID FTMS 0 0 0 16950 530609.6875 0.4587830194154579 2 -0.1456756591796875 12 Unmodified _YVISEGFLKA_ ENSG00000006831|ENST00000357103|ADIPOR2 63.960520009940105 0.0261970246776379 3 YV{I|L}SEG{M(Oxidation (M))|F}{I|L}[KA] 10 0 + 93.382 0.0 0.0 8.2961 8.2961 92.162 0.0 0.0 0.0 36.53212513775344 8.283409326844264 8.283409326844264 8.283409326844264 0 1.0114393726401687 2.0 0.5994850021680094 1.110924374808178 + + YV{I|L}SEG{M(Oxidation (M))|F}{I|L}[KA];YV{I|L}SEG{M(Oxidation (M))|F}[KA]{I|L};YV{I|L}SVN[YR]{I|L};YV{I|L}SVGG[YR]{I|L};YV{I|L}{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}M{I|L};YV{I|L}{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}P{M(Oxidation (M))|F};YV{I|L}S{[MG]|[TS]}{[ET]|[MV]}KV;YV{I|L}{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[SA]|[TG]}[KA];YV{I|L}{NN|[MP]|[D{I|L}]|[EV]}[YN]KV;[Q{I|L}][WH]VS{I|L}P{M(Oxidation (M))|F} 8.2961;7.5602;6.1294;5.3114;4.9611;4.8047;4.5658;4.4359;4.075;3.6315 +;-;-;-;-;-;-;-;-;- + 3274 + 1 1.005 179336.5 1.0 11275 5685 16950 HBL1_DMSO_200M_050219_1,16962 HBL1_DMSO_200M_050219_1,16962,YVISEGFLKA True True YVISEGFLKA 81.700643 563.811267077923 20908478.0 16950.0 ENSG00000006831|ENST00000357103|ADIPOR2 6.942735036214192 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16963 81.708 401.0 282900.0 25 0 23309.0 15753 ISAIRERFPKL 11 157 665.401478192562 1328.7884034519238 2 665.4027587771416 MULTI CID FTMS 0 0 0 16950 363472.0625 0.2215208759858551 -1 0.069732666015625 13 Unmodified _ISAIRERFPKL_ ENSG00000162231|ENST00000294172|NXF1 9.38312468134398 0.8308777417566128 3 {[TV]|[{I|L}S]}AV 4 8 15.367 0.0 0.0 1.1564 0.0 0.0 0.0 955.5434122194964 955.5434122194964 3.1481019582860448 0.0 0.0 0.0 0 0.0 1.0 0.6694451763165201 0.0 {[TV]|[{I|L}S]}AV 1.1564 - 390 1 1.005 91854.3 1.0 11276 5685 16950 HBL1_DMSO_200M_050219_1,16963 HBL1_DMSO_200M_050219_1,16963,ISAIRERFPKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16964 81.715 397.0 475480.0 25 0 53695.0 + 38418 TRKRRPTRTEP 11 172 699.4086727025749 1396.8027924719495 2 699.4098998904228 MULTI CID FTMS 0 0 0 16950 342506.59375 0.3415532119999294 -7 0.5561294555664062 14 Unmodified _TRKRRPTRTEP_ REV__ENST00000249373.7_1_7:128829191-128843254:+|nuORF 2.498486711656943 0.8633599123570009 3 {[QN]|[E{I|L}]|[KN]}WAS{I|L} 6 -1 31.82 0.0 0.0 2.2781 0.0 0.0 0.0 694.4152552007184 694.4152552007184 7.868062918925389 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.7742275032520141 0.0 {[QN]|[E{I|L}]|[KN]}WAS{I|L} 2.2781 - 1105 1 1.005 142902.4 1.0 11277 5685 16950 HBL1_DMSO_200M_050219_1,16964 HBL1_DMSO_200M_050219_1,16964,TRKRRPTRTEP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16965 81.723 358.0 971290.0 25 0 301470.0 + 45001 YPSPTGVLI 9 127 946.5253113740694 945.5180349074692 1 946.5327026247978 MULTI CID FTMS 0 0 0 16950 311894.5 0.0561832221402906 -6 0.4835433959960937 15 Unmodified _YPSPTGVLI_ ENSG00000174231|ENST00000304992|PRPF8 81.61307344734483 0.0171259190214613 3 [EP]KSPY{I|L}{I|L} 8 5 + 60.524 0.0 0.0 6.4012 6.4012 80.269 0.0 0.0 0.0 1.9144187577321568 14.044758812377124 1.9144187577321568 1.9144187577321568 0 0.25 0.9208187539523752 1.2440840204505514 0.0 [EP]KSPY{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[TP]GV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[TP]R{I|L}{I|L};[EP]KS{I|L}{M(Oxidation (M))|F}{I|L}{I|L};[EP]K{I|L}S{M(Oxidation (M))|F}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[RE]|[WV]}GV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[RE]|[WV]}R{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PSPY{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KE[PS]{I|L}{I|L};[EP]KSP{I|L}Y{I|L} 6.4012;6.1987;6.0182;5.8682;5.801;5.724;5.5507;5.5298;5.1621;5.0279 -;+;-;-;-;-;-;-;-;- + 2705 1 1.005 226645.3 1.0 11278 5685 16950 HBL1_DMSO_200M_050219_1,16965 HBL1_DMSO_200M_050219_1,16965,YPSPTGVLI True True YPSPTGVLI 81.722599 946.532702624798 60735600.0 16950.0 ENSG00000174231|ENST00000304992|PRPF8 6.3693820635477705 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16966 81.731 468.0 386890.0 25 0 36022.0 + 26089 NPFEKGDLYI 10 183 598.3031066615829 1194.5916603899657 2 598.3041869997978 MULTI CID FTMS 0 0 0 16950 310192.25 1.0 0 0.0 16 Unmodified _NPFEKGDLYI_ ENSG00000069345|ENST00000317089|DNAJA2;ENST00000569553.1_1_16:46992902-46993307:-|nuORF 63.22749603027936 0.0281198777558511 3 [NP]{M(Oxidation (M))|F}E[VS]N{I|L}Y{I|L} 10 3 + 78.941 0.0 0.0 6.6082 6.6082 88.214 0.0 0.0 0.0 11.60804615804308 15.026975159433531 11.60804615804308 8.26606256887672 0 1.6549471895720984 1.2218487496163564 0.3054621874040891 1.6184151806525389 [NP]{M(Oxidation (M))|F}E[VS]N{I|L}Y{I|L};[NP]{M(Oxidation (M))|F}E[VS]{I|L}NY{I|L};[NP]{M(Oxidation (M))|F}E[VS]GG{I|L}Y{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NE[VS]N{I|L}Y{I|L};[NP]{M(Oxidation (M))|F}E[VS]{I|L}GGY{I|L};[NP]{M(Oxidation (M))|F}E[VS]{I|L}YN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NE[VS]{I|L}NY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NE[VS]GG{I|L}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}ME[VS]N{I|L}Y{I|L};{[QS]|[NT]}{[SA]|[TG]}N[VS]N{I|L}Y{I|L} 6.6082;5.9163;5.841;5.6365;5.1491;5.1086;4.9445;4.8693;4.5038;4.4973 -;-;-;-;-;-;-;-;-;- 3173 1 1.005 134234.4 1.0 11279 5685 16950 HBL1_DMSO_200M_050219_1,16966 HBL1_DMSO_200M_050219_1,16966,NPFEKGDLYI True True NPFEKGDLYI 81.730895 598.304186999798 3384126.75 16950.0 ENST00000569553.1_1_16:46992902-46993307:-|nuORF;;ENSG00000069345|ENST00000317089|DNAJA2 6.02198855082194 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16967 81.739 468.0 125710.0 25 0 9126.1 -1 0 116 605.5825481270796 1813.7258149814384 3 605.9175903201103 MULTI CID FTMS 0 0 0 16950 302553.4375 0.9241157235240122 -1 0.069732666015625 17 3 {I|L}{I|L}DA 4 -1 31.427 0.0 0.0 1.7327 0.0 0.0 0.0 1398.4699610598168 1398.4699610598168 15.22878745280337 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}DA 1.7327 - 149 1 1.005 52737.1 1.0 11280 5685 16950 HBL1_DMSO_200M_050219_1,16967 HBL1_DMSO_200M_050219_1,16967, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16968 81.743 211.0 634070.0 25 0 52071.0 + + -1 YPPLGRFAV 9 157 509.2850040416767 1016.5554551501534 2 510.2877075076103 MULTI CID FTMS 0 0 0 16950 279356.28125 0.635417005779839 -4 0.3148193359375 18 Oxidation (M) _M(Oxidation (M))LIQTVPSL_ ENSG00000101210|ENST00000217182|EEF1A2;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5 19.438996006549623 0.310492472477042 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L} 3 -1 24.437 0.0 0.0 2.4039 0.0 0.0 0.0 640.3352152422034 640.3352152422034 8.239087409443183 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L} 2.4039 + + 995 1 1.005 108138.6 1.0 11281 5685 16950 HBL1_DMSO_200M_050219_1,16968 HBL1_DMSO_200M_050219_1,16968,MLIQTVPSL False False YPPLGRFAV 81.743199 510.28770750761 6887674.5 16950.0 ENSG00000101210|ENST00000217182|EEF1A2;;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;;ENSG00000156508|ENST00000309268|EEF1A1;;nc|ENSG00000196205|Q5VTE0|EEF1A1P5 3.0607570310433707 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16969 81.752 488.0 249280.0 25 0 12581.0 -1 0 156 600.5938798923734 1798.75981027732 3 600.5940429568291 MULTI CID FTMS 0 0 0 16950 269854.71875 0.5795057644219264 -1 0.069732666015625 19 3 [QA]HDE 5 -1 28.57 0.0 0.0 1.5883 0.0 0.0 0.0 1215.5182343276358 1215.5182343276358 4.6421059732441705 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.7614393726401688 0.0 [QA]HDE 1.5883 - 513 + 1 1.005 95719.0 1.0 11282 5685 16950 HBL1_DMSO_200M_050219_1,16969 HBL1_DMSO_200M_050219_1,16969, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16970 81.761 452.0 428650.0 25 0 22057.0 20944 LNFTITNLQYE 11 210 678.3466683663812 0 678.3466064333916 PEAK CID FTMS 0 0 0 16950 260519.78125 0.5756427292231954 1 -0.1054840087890625 20 Unmodified _LNFTITNLQYE_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 7.608950283845883 0.472344094183283 3 KG{M(Oxidation (M))|F}E 4 9 16.191 0.0 0.0 1.1952 0.0 0.0 666.3139921753599 224.10515772037343 890.4191498957333 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 KG{M(Oxidation (M))|F}E 1.1952 - 360 + 1 1.005 138691.5 1.0 11283 5685 16950 HBL1_DMSO_200M_050219_1,16970 HBL1_DMSO_200M_050219_1,16970,LNFTITNLQYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16972 81.765 3.3 10424000.0 25 0 1561900.0 + -1 AIMPSALAL 9 57 451.7527689299804 901.4909849267608 2 451.7529785037041 MULTI CID FTMS 0 0 0 16971 78345536.0 1.0 0 0.0 1 Oxidation (M) _AIM(Oxidation (M))PSALAL_ REV__ENSG00000196531|ENST00000454682|NACA;REV__nc|ENSG00000196531|E9PAV3-2|NACA 32.116972079565 0.1225432171549407 3 [{I|L}A]{M(Oxidation (M))|F}APS 6 -1 49.13 0.0 0.0 5.4498 0.0 0.0 0.0 312.1928641594358 312.1928641594358 32.93182501400722 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}APS 5.4498 - 57 1 0.995 32676.7 1.0 11284 5686 16971 HBL1_DMSO_200M_050219_1,16972 HBL1_DMSO_200M_050219_1,16972,AIMPSALAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16973 81.766 7.7 4802100.0 25 0 410430.0 + 35453 STLILPTGPP 10 73 498.2931144968455 994.571676060491 2 498.2927429080009 MULTI CID FTMS 0 0 0 16971 8563787.0 0.9616469185771136 2 -0.1675567626953125 2 Unmodified _STLILPTGPP_ REV__ENST00000305557.9_1_2:74666898-74667633:-|nuORF;REV__ENST00000460968.1_1_2:74666898-74667252:-|nuORF 37.97399986684836 0.1789611706409123 3 {[MG]|[TS]}{I|L}ST{I|L}{M(Oxidation (M))|F}KV 9 -1 + 28.553 0.0 0.0 2.8709 2.8709 82.158 0.0 0.0 0.0 4.824025793069712 8.160612466810594 4.824025793069712 28.55274771363796 0 0.5682503180159344 0.0 0.5 0.0 {[MG]|[TS]}{I|L}ST{I|L}{M(Oxidation (M))|F}KV 2.8709 - 153 + 1 0.995 34199.1 1.0 11285 5686 16971 HBL1_DMSO_200M_050219_1,16973 HBL1_DMSO_200M_050219_1,16973,STLILPTGPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16974 81.767 0.75 48543000.0 25 0 3163000.0 + 3885 DALDKIRLI 9 63 528.8239744481274 1055.633395963055 2 528.8243286013603 MULTI CID FTMS 0 0 0 16971 48782648.0 0.3357133600113016 -3 0.271270751953125 3 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 24.99096001346401 0.2132109383330889 3 {[DA]|[EG]}{I|L}DK{I|L} 6 3 49.754 0.0 0.0 4.7132 0.0 0.0 0.0 397.2576693170532 397.2576693170532 40.80198135264581 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}{I|L}DK{I|L} 4.7132 + + 24 + 1 0.995 35387.8 1.0 11286 5686 16971 HBL1_DMSO_200M_050219_1,16974 HBL1_DMSO_200M_050219_1,16974,DALDKIRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16975 81.769 2.9 19519000.0 25 0 1843300.0 + 3892 DALDKIRLI 9 74 352.8853732487592 1055.6342903464777 3 352.8852111697197 MULTI CID FTMS 0 0 0 16971 17607340.0 0.5161792252706056 -2 0.1752166748046875 4 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 29.081581746732265 0.1611639662936252 3 {[DA]|[EG]}{I|L}DK{I|L}[R{I|L}]{I|L} 9 0 + 61.569 0.0 0.0 5.8325 5.8325 91.611 0.0 0.0 0.0 50.732005334402686 1.163385648463816 1.163385648463816 61.5694607708715 0 0.3494850021680094 2.0 0.0 0.8494850021680094 + + {[DA]|[EG]}{I|L}DK{I|L}[R{I|L}]{I|L} 5.8325 + + 48 + 1 0.995 50938.3 1.0 11287 5686 16971 HBL1_DMSO_200M_050219_1,16975 HBL1_DMSO_200M_050219_1,16975,DALDKIRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16976 81.77 25.0 1431400.0 25 0 190430.0 + 12681 GVLPNIQAV 9 68 455.7712203434208 909.5278877536416 2 455.7714111208916 MULTI CID FTMS 0 0 0 16971 4237123.0 0.064299666901884 14 -1.1089859008789062 5 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 19.438996006549623 0.310492472477042 3 [VG][PA]QA 6 4 22.676 0.0 0.0 2.4932 0.0 0.0 0.0 383.2281190370979 383.2281190370979 1.0720996964786875 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VG][PA]QA 2.4932 - 122 1 0.995 35545.3 1.0 11288 5686 16971 HBL1_DMSO_200M_050219_1,16976 HBL1_DMSO_200M_050219_1,16976,GVLPNIQAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16977 81.771 21.0 2539000.0 25 0 326370.0 + 3965 DALQGFKI 8 80 446.25047190755606 890.4863908819121 2 446.2507507205009 MULTI CID FTMS 0 0 0 16971 3497579.0 0.8927140228741475 2 -0.1675567626953125 6 Unmodified _DALQGFKI_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 53.57557251787612 0.1224291679108181 3 {[DA]|[EG]}{I|L}Q 4 4 43.232 0.0 0.0 4.8549 0.0 0.0 0.0 460.2587158959424 460.2587158959424 29.622114391106003 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.5 + {[DA]|[EG]}{I|L}Q 4.8549 + + 52 + 1 0.995 48426.4 1.0 11289 5686 16971 HBL1_DMSO_200M_050219_1,16977 HBL1_DMSO_200M_050219_1,16977,DALQGFKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16978 81.772 24.0 1981100.0 25 0 102130.0 + 9906 FPFYGKPMRI 10 59 628.3364646422485 1254.658376351297 2 628.3374511599541 MULTI CID FTMS 0 0 0 16971 2952257.5 0.6511558276065328 -12 0.8413848876953125 7 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 36.12702656103203 0.1984647928738587 3 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 7 5 73.066 0.0 0.0 5.8235 0.0 0.0 0.0 399.18427454166255 399.18427454166255 66.07586369482071 0.0 0.0 0.0 0 1.25 2.0 0.0 0.0 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 5.8235 - 153 + 1 0.995 41266.7 1.0 11290 5686 16971 HBL1_DMSO_200M_050219_1,16978 HBL1_DMSO_200M_050219_1,16978,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16979 81.774 57.0 1264600.0 25 0 250350.0 -1 0 81 336.1045918213961 670.1946307095923 2 336.1048461794853 MULTI CID FTMS 0 0 0 16971 2935765.75 0.8663012822267254 2 -0.1675567626953125 8 3 P 1 -1 0.088644 0.0 0.0 0.013227 0.0 0.0 435.1275358383016 134.99160181217033 570.119137650472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.013227 - 7 + 1 0.995 64857.0 1.0 11291 5686 16971 HBL1_DMSO_200M_050219_1,16979 HBL1_DMSO_200M_050219_1,16979, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16980 81.775 19.0 2722800.0 25 0 381990.0 + 12990 HALIVRLL 8 70 467.8136475363835 933.612742139567 2 467.8137390017509 MULTI CID FTMS 0 0 0 16971 2727484.0 1.0 0 0.0 9 Unmodified _HALIVRLL_ REV__ENSG00000198925|ENST00000361242|ATG9A;REV__nc|ENSG00000198925|Q7Z3C6-2|ATG9A;REV__nc|ENSG00000198925|Q7Z3C6-3|ATG9A 36.04419817259434 0.3004715606373109 3 HA{I|L}V{I|L}{I|L}R{I|L} 8 -1 + 77.389 0.0 0.0 8.2892 8.2892 91.983 0.0 0.0 0.0 56.419497169889326 7.658715643802765 7.658715643802765 8.010299956639813 0 2.004432191740108 1.6989700043360187 0.0 0.0 HA{I|L}V{I|L}{I|L}R{I|L};HA{I|L}{I|L}V{I|L}R{I|L};{I|L}HAV{I|L}{I|L}R{I|L};H{I|L}AV{I|L}{I|L}R{I|L};{I|L}HA{I|L}V{I|L}R{I|L};H{I|L}A{I|L}V{I|L}R{I|L} 8.2892;7.4312;5.6401;5.6114;4.7821;4.7534 -;-;-;-;-;- 97 + 1 0.995 45775.3 1.0 11292 5686 16971 HBL1_DMSO_200M_050219_1,16980 HBL1_DMSO_200M_050219_1,16980,HALIVRLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16981 81.776 16.0 2034100.0 25 0 236930.0 + 22213 SPLDIYPKI 9 65 523.3041480219179 1044.5937431106356 2 523.3010742068291 MULTI CID FTMS 0 0 0 16971 2528484.75 0.6215124745385131 15 -1.1621856689453125 10 Unmodified _LPQVPEHLL_ ENST00000588652.5_1_19:45854889-45860860:-|nuORF;ENSG00000104884|ENST00000391945|ERCC2;ENST00000391942.6_1_19:45854889-45865127:-|nuORF 14.581692164780916 0.4419739649577144 3 [PS]{I|L}D{I|L}YPK{I|L} 9 7 + 63.977 0.0 0.0 6.1245 6.1245 91.039 0.0 0.0 0.0 44.72457564256931 10.968878562567532 10.968878562567532 20.51152522447381 0 0.8807196863200843 1.6989700043360187 0.0 0.0 [PS]{I|L}D{I|L}YPK{I|L};[PS]{I|L}D{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L} 6.1245;4.161 -;- 94 + 1 0.995 31451.7 1.0 11293 5686 16971 HBL1_DMSO_200M_050219_1,16981 HBL1_DMSO_200M_050219_1,16981,LPQVPEHLL False False SPLDIYPKI 81.77598 523.301074206829 83607600.0 16971.0 ENST00000588652.5_1_19:45854889-45860860:-|nuORF;;ENSG00000104884|ENST00000391945|ERCC2;;ENST00000391942.6_1_19:45854889-45865127:-|nuORF 5.622051397959392 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16982 81.778 79.0 675890.0 25 0 69025.0 -1 0 77 587.945133650528 1760.8135715517838 3 587.9449951052666 MULTI CID FTMS 0 0 0 16971 2201098.0 1.0 0 0.0 11 3 [{I|L}T]E 3 -1 14.966 0.0 0.0 0.84994 0.0 0.0 0.0 1414.615334817662 1414.615334817662 0.9864468880481104 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3054621874040891 0.0 [{I|L}T]E 0.84994 - 108 1 0.995 48800.6 1.0 11294 5686 16971 HBL1_DMSO_200M_050219_1,16982 HBL1_DMSO_200M_050219_1,16982, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16983 81.779 40.0 2357200.0 25 0 198700.0 + -1 LAEMEMSL 8 111 478.2091679885692 954.4037830439383 2 478.2090026736259 MULTI CID FTMS 0 0 0 16971 2076352.25 1.0 0 0.0 12 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 10.183394434864962 0.7604730176254005 3 {[VA]|[{I|L}G]}D 3 -1 22.676 0.0 0.0 2.3759 0.0 0.0 0.0 666.2472028039571 666.2472028039571 6.052651312031738 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}D 2.3759 - 231 1 0.995 78384.8 1.0 11295 5686 16971 HBL1_DMSO_200M_050219_1,16983 HBL1_DMSO_200M_050219_1,16983,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16984 81.78 38.0 1102100.0 25 0 70012.0 -1 0 68 845.8942355959585 1689.773918258717 2 845.8947631716728 MULTI CID FTMS 0 0 0 16971 1787260.375 1.0 0 0.0 13 3 Y{M(Oxidation (M))|F}{[QG]|[NA]}QQ 6 -1 39.882 0.0 0.0 2.3602 0.0 0.0 358.21702681961443 577.2031344049436 935.420161224558 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 2.004432191740108 Y{M(Oxidation (M))|F}{[QG]|[NA]}QQ 2.3602 - 210 + 1 0.995 40325.3 1.0 11296 5686 16971 HBL1_DMSO_200M_050219_1,16984 HBL1_DMSO_200M_050219_1,16984, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16985 81.781 22.0 3037800.0 25 0 355440.0 + 33899 SLFPNSPKW 9 96 538.2813850279334 1074.5482171226668 2 538.2806274294853 MULTI CID FTMS 0 0 0 16971 1778674.375 0.8754058690738256 -3 0.271270751953125 14 Unmodified _SLFPNSPKW_ ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF 28.23362336080872 0.1719529537093671 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW 9 0 + 72.119 0.0 0.0 6.7116 6.7116 90.009 0.0 0.0 0.0 58.62449708633612 12.09614293199344 12.09614293199344 9.208187539523747 0 0.805462187404089 2.0 0.0 0.3252574989159953 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]SPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PN[DV]{[{M(Oxidation (M))|F}H]|[RQ]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGG[DV]{[{M(Oxidation (M))|F}H]|[RQ]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG][DV]{[{M(Oxidation (M))|F}H]|[RQ]} 6.7116;5.8547;5.2944;4.4159;3.559;2.9987 +;-;-;-;-;- + 512 + 1 0.995 57117.3 1.0 11297 5686 16971 HBL1_DMSO_200M_050219_1,16985 HBL1_DMSO_200M_050219_1,16985,SLFPNSPKW False True SLFPNSPKW 81.781346 538.280627429485 29870972.0 16971.0 ENST00000531200.1_1_11:102398162-102401431:-|nuORF;;ENST00000533366.5_1_11:102395628-102401431:-|nuORF;;ENSG00000137673|ENST00000260227|MMP7 7.988738854726155 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16986 81.783 45.0 698680.0 25 0 59338.0 + 23184 LSRRMENTL 9 59 560.3015923871525 1118.5886318411049 2 560.3022338747978 MULTI CID FTMS 0 0 0 16971 1529075.25 0.0065592693434787 29 -2.0411453247070312 15 Unmodified _LSRRMENTL_ REV__ENSG00000187775|ENST00000389840|DNAH17 4.3292370932331545 0.7635526921153418 3 YV{I|L} 3 -1 16.198 0.0 0.0 1.4481 0.0 0.0 272.1532203194236 468.1933992975219 740.3466196169455 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YV{I|L} 1.4481 - 38 + 1 0.995 32675.4 1.0 11298 5686 16971 HBL1_DMSO_200M_050219_1,16986 HBL1_DMSO_200M_050219_1,16986,LSRRMENTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16987 81.786 178.0 1172000.0 25 0 76918.0 + -1 FFFYCLFCFVI 11 145 781.8653083742541 1561.7160638153082 2 781.8652831912041 MULTI CID FTMS 0 0 0 16971 1280010.75 0.6802138802986406 -2 0.1752166748046875 16 2 Carbamidomethyl (C) _FFFYC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))FVI_ REV__ENSG00000164197|ENST00000389100|RNF180 10.823927491677226 0.8099964156050846 3 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQV{I|L} 13 -1 + 116.27 0.0 0.0 7.445 7.445 86.322 0.0 0.0 0.0 3.8724324227584495 4.771212547196626 3.8724324227584495 3.8724324227584495 0 1.2302046884880935 1.5228787452803376 1.1641478515490356 2.1861818737241734 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQ{I|L}V;[YQ]V[CS]QNA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQNA{M(Oxidation (M))|F}YQ{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]NA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QNA{M(Oxidation (M))|F}YQ{I|L}V;[HD]EAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L} 7.445;7.197;7.1395;7.1023;6.8915;6.8641;6.8641;6.8641;6.7968;6.6161 -;-;-;-;-;-;-;-;-;- 5515 1 0.995 147909.5 1.0 11299 5686 16971 HBL1_DMSO_200M_050219_1,16987 HBL1_DMSO_200M_050219_1,16987,FFFYCLFCFVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16988 81.788 65.0 1366800.0 25 0 131800.0 + 21042 LPADFGRLV 9 93 494.28404559521175 986.5535382572236 2 494.2840759158134 MULTI CID FTMS 0 0 0 16971 1086329.5 1.0 0 0.0 17 Unmodified _LPADFGRLV_ ENSG00000108829|ENST00000225972|LRRC59 41.8396318013385 0.0653578398400075 3 {I|L}PAD{M(Oxidation (M))|F}RR{I|L} 8 2 + 69.8 0.0 0.0 7.0751 7.0751 83.102 0.0 0.0 0.0 55.80993219041424 4.101744650890495 4.101744650890495 2.552725051033065 0 1.0114393726401687 1.6989700043360187 0.0 0.0 {I|L}PAD{M(Oxidation (M))|F}RR{I|L};{I|L}PAD{M(Oxidation (M))|F}{[NV]|[RG]}V{I|L};{I|L}PAD{M(Oxidation (M))|F}{[NV]|[RG]}{I|L}V;{I|L}PAD{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K{I|L};{I|L}PW{M(Oxidation (M))|F}RR{I|L};{I|L}PW{M(Oxidation (M))|F}{[NV]|[RG]}V{I|L};{I|L}PW{M(Oxidation (M))|F}{[NV]|[RG]}{I|L}V;{I|L}PW{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K{I|L};{I|L}PA[YT]{I|L}[NP]V;{I|L}PA[YT]{I|L}{[NV]|[RG]}P 7.0751;6.8163;6.6174;6.5396;6.0957;5.83;5.631;5.5533;4.8389;4.6221 -;-;+;-;-;-;-;-;-;- + 380 + 1 0.995 73429.8 1.0 11300 5686 16971 HBL1_DMSO_200M_050219_1,16988 HBL1_DMSO_200M_050219_1,16988,LPADFGRLV True True LPADFGRLV 81.787636 494.284075915813 14816074.0 16971.0 ENSG00000108829|ENST00000225972|LRRC59 6.024376233418782 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16989 81.792 216.0 126180.0 25 0 18929.0 24591 MLIRKGILQSL 11 56 636.3992797732353 0 636.3992797732353 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _MLIRKGILQSL_ ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1 6.2057823575117 0.47618401536486 3 P 1 11 2.4743 0.0 0.0 0.1947 0.0 0.0 1054.6567104962903 116.05126367740468 1170.7079741736952 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.1947 - 6 + 1 0.995 27360.8 1.0 11301 5686 16971 HBL1_DMSO_200M_050219_1,16989 HBL1_DMSO_200M_050219_1,16989,MLIRKGILQSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16990 81.796 236.0 354160.0 25 0 35249.0 -1 0 122 647.3757613475314 646.3684848809313 1 648.3752319216728 MULTI CID FTMS 0 0 0 16971 869269.0 0.4136897991584089 10 -0.8246841430664062 19 3 [{I|L}V]AV[{M(Oxidation (M))|F}V] 6 -1 + 18.082 0.0 0.0 2.7975 2.7975 74.516 0.0 0.0 0.0 5.269312892915346 4.092568545288064 4.092568545288064 5.269312892915346 0 0.0 0.9208187539523752 0.0 0.0 [{I|L}V]AV[{M(Oxidation (M))|F}V];[{I|L}A]VV[{M(Oxidation (M))|F}V];[{I|L}T]{[DS]|[MA]|[CV]|TT}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TA]V{I|L};[{I|L}A][MT]V{I|L};{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}V{I|L} 2.7975;1.9823;1.9245;1.4154;0.60022;0.4002 -;-;-;-;-;- 119 1 0.995 73179.1 1.0 11302 5686 16971 HBL1_DMSO_200M_050219_1,16990 HBL1_DMSO_200M_050219_1,16990, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 16991 81.801 268.0 605980.0 25 0 122150.0 + 31783 RSNFGYNIPL 10 106 590.809000822903 0 590.8097411990166 PEAK CID FTMS 0 0 0 16971 726356.8125 0.3263587726940443 -3 0.271270751953125 20 Unmodified _RSNFGYNIPL_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000553665.5_1_14:58711638-58724717:+|nuORF;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;ENST00000555931.5_1_14:58714534-58727692:+|nuORF;ENST00000556321.1_1_14:58714534-58724570:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 27.22323531849824 0.2400927426089275 3 {I|L}NYG{M(Oxidation (M))|F}{M(Oxidation (M))|F} 6 8 38.933 0.0 0.0 3.3005 0.0 0.0 228.1451188879288 207.11448084049064 435.2595997284194 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.7302046884880937 {I|L}NYG{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3.3005 - 109 + 1 0.995 130102.8 1.0 11303 5686 16971 HBL1_DMSO_200M_050219_1,16991 HBL1_DMSO_200M_050219_1,16991,RSNFGYNIPL False True RSNFGYNIPL 81.801146 590.809741199017 38745856.0 16971.0 ENST00000553665.5_1_14:58711638-58724717:+|nuORF;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000556321.1_1_14:58714534-58724570:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3;;ENST00000555931.5_1_14:58714534-58727692:+|nuORF;;ENSG00000100567|ENST00000216455|PSMA3;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF 6.210895856221517 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16993 81.805 46.0 2071900.0 25 0 342590.0 + + 13802 FIFSDTHEL 9 89 554.7693373998666 1107.524121866533 2 554.7695190310478 MULTI CID FTMS 0 0 0 16992 825686.125 0.4131838358686326 1 -0.1273651123046875 1 Unmodified _HTDSFIFEI_ ENSG00000102699|ENST00000381989|PARP4 25.399314129420983 0.2080152500878129 3 [HT]DS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 9 -1 + 33.795 0.0 0.0 3.0514 3.0514 68.608 0.0 0.0 0.0 0.9691001300805624 3.0276467146073607 0.9691001300805624 0.9691001300805624 0 0.4247425010840047 0.0 0.9247425010840048 0.0 [HT]DS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[YC]|[HE]}SS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[HT]EDS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}TDS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L};[HT]DS{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}{I|L};[HT]DES{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}SS{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}SES{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L};[HT]DSE{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}SSE{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L} 3.0514;2.9639;2.7781;2.6906;2.6397;2.6191;2.5522;2.5316;2.4601;2.3726 +;-;-;-;-;-;-;-;-;- + 527 1 0.995 74887.7 1.0 11304 5687 16992 HBL1_DMSO_200M_050219_1,16993 HBL1_DMSO_200M_050219_1,16993,HTDSFIFEI False False FIFSDTHEL 81.805313 554.769519031048 42113529.0 16992.0 ENSG00000102699|ENST00000381989|PARP4 5.644235769907634 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16994 81.809 182.0 673120.0 25 0 54711.0 + 18087 KTIEDTLMTV 10 144 575.8052734276696 1149.595993922139 2 575.8061401247978 MULTI CID FTMS 0 0 0 16992 757152.4375 0.5611734223371354 1 -0.1273651123046875 2 Unmodified _KTIEDTLMTV_ ENSG00000164144|ENST00000353617|ARFIP1;nc|ENSG00000164144|P53367-2|ARFIP1;nc|ENSG00000164144|P53367-3|ARFIP1 67.83816525789305 0.0190062514522628 3 {[TV]|[{I|L}S]}EEKT{I|L}MTV 10 3 + 108.3 0.0 0.0 9.4206 9.4206 89.356 0.0 0.0 0.0 4.190067809585756 15.026975159433531 4.190067809585756 4.190067809585756 0 1.174742501084005 1.5228787452803376 2.971848749616356 0.0 {[TV]|[{I|L}S]}EEKT{I|L}MTV;{[QN]|[E{I|L}]|[KN]}SEKT{I|L}MTV;{NN|[MP]|[D{I|L}]|[EV]}TEKT{I|L}MTV;{[TV]|[{I|L}S]}EETK{I|L}MTV;[{I|L}T]DEKT{I|L}MTV;{[QN]|[E{I|L}]|[KN]}SETK{I|L}MTV;{[QN]|[E{I|L}]|[KN]}TDKT{I|L}MTV;{NN|[MP]|[D{I|L}]|[EV]}TETK{I|L}MTV;[{I|L}T]DETK{I|L}MTV;[{I|L}T]EDKT{I|L}MTV 9.4206;9.0561;8.7866;8.7388;8.3976;8.3743;8.3356;8.1048;7.7158;7.6771 -;-;-;-;-;-;-;-;-;- 4829 1 0.995 100069.6 1.0 11305 5687 16992 HBL1_DMSO_200M_050219_1,16994 HBL1_DMSO_200M_050219_1,16994,KTIEDTLMTV True True KTIEDTLMTV 81.808836 575.806140124798 9830323.0 16992.0 nc|ENSG00000164144|P53367-3|ARFIP1;;nc|ENSG00000164144|P53367-2|ARFIP1;;ENSG00000164144|ENST00000353617|ARFIP1 5.701594193776448 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16995 81.814 310.0 969620.0 25 0 62534.0 + 29543 QLPELFHKI 9 163 375.5537556797913 1123.639437639574 3 375.5534545779228 MULTI CID FTMS 0 0 0 16992 641981.375 0.5312615531534536 -1 0.040191650390625 3 Unmodified _QLPELFHKI_ ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-5|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2 49.55428908609986 0.0413471690215031 3 [EP]{I|L}QQR[Q{I|L}]{I|L} 9 7 + 46.484 0.0 0.0 4.1369 4.1369 79.32 0.0 0.0 0.0 1.8808348521406304 12.654010567908095 1.8808348521406304 7.027712246842476 0 0.6923877696554315 1.3010299956639813 0.5 0.0 [EP]{I|L}QQR[Q{I|L}]{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KEP[Q{I|L}]{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EKP[Q{I|L}]{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}K{I|L}EP[Q{I|L}]{I|L};[Q{I|L}]PEQR[Q{I|L}]{I|L};[EP]{I|L}Q[AG]R[Q{I|L}]{I|L};[EP]{I|L}[AG]QR[Q{I|L}]{I|L};[EP]{I|L}{M(Oxidation (M))|F}HK[Q{I|L}]{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KE{I|L}[QP]{I|L};[VP][RD]QR[Q{I|L}]{I|L} 4.1369;3.5115;3.4763;3.4252;3.3201;3.3174;3.3174;3.247;3.189;3.1874 -;-;-;-;-;-;-;-;-;- 1327 1 0.995 247702.4 1.0 11306 5687 16992 HBL1_DMSO_200M_050219_1,16995 HBL1_DMSO_200M_050219_1,16995,QLPELFHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16996 81.82 280.0 422400.0 25 0 105850.0 + 23423 LTELRHLRSL 10 92 619.372037755788 1236.729522578376 2 619.3714477419853 MULTI CID FTMS 0 0 0 16992 605799.125 0.5976892661258342 3 -0.2648696899414062 4 Unmodified _LTELRHLRSL_ REV__ENSG00000174348|ENST00000312553|PODN;REV__ENST00000471210.1_1_1:53537215-53538633:+|nuORF;REV__nc|ENSG00000174348|Q7Z5L7-2|PODN;REV__nc|ENSG00000174348|Q7Z5L7-3|PODN 3.944395688203298 0.708391353636983 3 {I|L} 1 -1 10.089 0.0 0.0 0.81575 0.0 0.0 1105.6345804170462 0.0 1105.6345804170462 0.0 3.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.81575 + + 31 + 1 0.995 89927.1 1.0 11307 5687 16992 HBL1_DMSO_200M_050219_1,16996 HBL1_DMSO_200M_050219_1,16996,LTELRHLRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 16997 81.826 328.0 887220.0 25 0 140760.0 + 35735 SVIDHIHLI 9 167 349.53820907982254 1045.5927978396676 3 349.5382263064384 MULTI CID FTMS 0 0 0 16992 585466.1875 0.4018163680651467 -2 0.1456756591796875 5 Unmodified _SVIDHIHLI_ ENSG00000123159|ENST00000393033|GIPC1;nc|ENSG00000123159|O14908-2|GIPC1 77.98433622928108 0.0180125044636492 3 [VS]{I|L}DH{I|L}H{I|L}{I|L} 9 0 + 76.542 0.0 0.0 7.3205 7.3205 89.182 0.0 0.0 0.0 19.38657731086293 12.028937514676484 12.028937514676484 6.918154769883799 0 1.4436726795685342 2.0 0.8494850021680094 0.0 + + [VS]{I|L}DH{I|L}H{I|L}{I|L};[VS]{I|L}{I|L}DHH{I|L}{I|L};[VS]{I|L}D{I|L}HH{I|L}{I|L};[VS]{I|L}DH{I|L}{I|L}H{I|L};[VS]{I|L}DH{I|L}{I|L}{I|L}H;[VS]{I|L}{I|L}DH{I|L}H{I|L};[H{I|L}]DH{I|L}{I|L}{I|L}[VS];[VS]{I|L}D{I|L}H{I|L}H{I|L};[VS]{I|L}{I|L}DH{I|L}{I|L}H;[H{I|L}]DH{I|L}VS{I|L}{I|L} 7.3205;6.6588;6.4685;6.4579;6.17;5.7963;5.6241;5.606;5.5084;5.4663 +;-;-;-;-;-;-;-;-;- + 1765 + 1 0.995 240227.5 1.0 11308 5687 16992 HBL1_DMSO_200M_050219_1,16997 HBL1_DMSO_200M_050219_1,16997,SVIDHIHLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16998 81.828 104.0 455630.0 25 0 38689.0 + 38321 TQLDLEDVQV 10 92 580.2967486627949 1158.5789443923898 2 580.2971679568291 MULTI CID FTMS 0 0 0 16992 528764.5 0.4290657172706894 3 -0.2648696899414062 6 Unmodified _TQLDLEDVQV_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 32.037481411007896 0.2488723560272515 3 DE{I|L}DPN{I|L} 7 8 43.448 0.0 0.0 3.7501 0.0 0.0 344.20777217517883 0.0 344.20777217517883 0.0 31.45783004947852 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.5 DE{I|L}DPN{I|L} 3.7501 - 586 + 1 0.995 45943.1 1.0 11309 5687 16992 HBL1_DMSO_200M_050219_1,16998 HBL1_DMSO_200M_050219_1,16998,TQLDLEDVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 16999 81.833 286.0 301050.0 25 0 16722.0 -1 0 120 893.3966606158098 1784.7787682984194 2 893.3946411013603 MULTI CID FTMS 0 0 0 16992 415011.0625 1.0 0 0.0 7 3 EAQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 11 -1 71.061 0.0 0.0 3.9815 0.0 0.0 475.1403980939469 0.0 475.1403980939469 0.0 49.6290447674422 0.0 0.0 0 0.7614393726401688 0.0 0.7302046884880937 0.9698565171985376 EAQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 3.9815 - 880 1 0.995 62459.9 1.0 11310 5687 16992 HBL1_DMSO_200M_050219_1,16999 HBL1_DMSO_200M_050219_1,16999, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17000 81.839 318.0 710790.0 25 0 80814.0 + -1 AVPGSPTFFPA 11 104 1090.557289709972 0 1090.554614245892 PEAK CID FTMS 0 0 0 16992 326641.75 0.2582782176969129 -5 0.3984298706054687 8 ENST00000369535.4_1_1:115258780-115259488:-|nuORF 3 WVA{M(Oxidation (M))|F}{M(Oxidation (M))|F}TP 7 -1 54.105 0.0 0.0 2.4829 0.0 0.0 1089.555683966983 238.08396326236564 1327.6396472293486 0.0 0.0 0.0 0.0 0 0.0 0.0 2.2658715643802765 0.0 WVA{M(Oxidation (M))|F}{M(Oxidation (M))|F}TP 2.4829 - 6587 + 1 0.995 142602.8 1.0 11311 5687 16992 HBL1_DMSO_200M_050219_1,17000 HBL1_DMSO_200M_050219_1,17000, False False AVPGSPTFFPA 81.838934 1090.55461424589 12493622.0 16992.0 ENST00000369535.4_1_1:115258780-115259488:-|nuORF 3.354564428329468 1.0 False 11.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17001 81.846 394.0 792330.0 25 0 140280.0 -1 GVLSLLCCT 9 197 483.2433003684715 964.4720478037432 2 483.2432739138603 MULTI CID FTMS 0 0 0 16992 314087.96875 0.5140540704206176 -1 0.040191650390625 9 Carbamidomethyl (C) _GVLSLLC(Carbamidomethyl (C))CT_ ENST00000368655.4_1_1:153781276-153781465:-|nuORF 30.22481116460888 0.1466181017706357 3 [VG]S{I|L}{I|L}TP{I|L} 8 -1 51.853 0.0 0.0 5.3763 0.0 0.0 0.0 180.9629828906657 180.9629828906657 32.45985027938448 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.6549471895720984 0.0 [VG]S{I|L}{I|L}TP{I|L} 5.3763 - 1411 1 0.995 237804.6 1.0 11312 5687 16992 HBL1_DMSO_200M_050219_1,17001 HBL1_DMSO_200M_050219_1,17001,GVLSLLCCT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17002 81.852 353.0 261130.0 25 0 34125.0 28322 PRRRQALRTAE 11 160 677.3950112965572 1352.7754696599145 2 677.3948242068291 MULTI CID FTMS 0 0 0 16992 282290.71875 0.1407799561999358 15 -1.207305908203125 10 Unmodified _PRRRQALRTAE_ ENSG00000140451|ENST00000559239|PIF1;ENST00000560444.1_1_15:65114569-65116540:-|nuORF;ENST00000560504.1_1_15:65115949-65116540:-|nuORF;nc|ENSG00000140451|Q9H611-2|PIF1;nc|ENSG00000140451|Q9H611-3|PIF1 7.101721422024254 0.8416415510090076 3 {[DA]|[EG]}G{I|L}WR 6 10 27.175 0.0 0.0 2.0089 0.0 0.0 0.0 651.3896491829422 651.3896491829422 15.392742423867444 0.0 0.0 0.0 0 0.0 0.6777807052660807 0.754432191740108 0.0 {[DA]|[EG]}G{I|L}WR 2.0089 - 720 1 0.995 76311.4 1.0 11313 5687 16992 HBL1_DMSO_200M_050219_1,17002 HBL1_DMSO_200M_050219_1,17002,PRRRQALRTAE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17003 81.861 479.0 611640.0 25 0 91207.0 + 16286 IVYPWMKKI 9 185 393.2314726092097 1176.6725884278292 3 393.2310668826103 MULTI CID FTMS 0 0 0 16992 259742.1875 0.6181788729677093 -2 0.1456756591796875 11 Unmodified _IVYPWMKKI_ ENSG00000198353|ENST00000430889|HOXC4 48.345845343767074 0.0439967357579942 3 [{I|L}V]YPWMKK{I|L} 9 0 + 65.032 0.0 0.0 5.5268 5.5268 79.186 0.0 0.0 0.0 24.13734275855269 10.93421685162236 10.93421685162236 3.0102999566398125 0 0.2887254899964357 1.6989700043360187 0.0 0.9291746928241126 + + [{I|L}V]YPWMKK{I|L};[{I|L}V]{I|L}{M(Oxidation (M))|F}WMKK{I|L};[{I|L}V]YPWMK{I|L}K;[{I|L}V]{I|L}{M(Oxidation (M))|F}WMK{I|L}K;[{I|L}V]YPWKKM{I|L};[{I|L}V]{I|L}{M(Oxidation (M))|F}WKKM{I|L};[{I|L}V]Y{I|L}P[KA]{[CA]|SS}S{I|L};[{I|L}V]YP{I|L}[KA]{[CA]|SS}S{I|L};[{I|L}V]{I|L}YP[KA]{[CA]|SS}S{I|L};[{I|L}V]{I|L}{M(Oxidation (M))|F}{I|L}[KA]{[CA]|SS}S{I|L} 5.5268;5.271;4.5976;4.3417;4.1697;3.9138;3.8374;3.8217;3.5816;3.5659 +;-;-;-;-;-;-;-;-;- + 986 + 1 0.995 229669.4 1.0 11314 5687 16992 HBL1_DMSO_200M_050219_1,17003 HBL1_DMSO_200M_050219_1,17003,IVYPWMKKI True True IVYPWMKKI 81.860848 393.23106688261 6216234.5 16992.0 ENSG00000198353|ENST00000430889|HOXC4 5.3155943552653 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17004 81.87 423.0 635400.0 25 0 45811.0 + 36156 SVVELVNKL 9 212 500.8056994772769 999.5968460213536 2 500.8052856326103 MULTI CID FTMS 0 0 0 16992 253127.734375 0.435276880931994 1 -0.1273651123046875 12 Unmodified _SVVELVNKL_ ENSG00000128335|ENST00000358502|APOL2 71.92227651296345 0.0203558744033348 3 [VS]VE{I|L}VNK{I|L} 9 0 + 82.743 0.0 0.0 8.2776 8.2776 90.688 0.0 0.0 0.0 21.29705516041472 6.492887666437127 6.492887666437127 6.492887666437127 0 1.1237125054200234 2.0 0.3252574989159953 1.0451140161145327 + + [VS]VE{I|L}VNK{I|L};[VS]VE{I|L}VQKV;[VS]VE{I|L}VGGK{I|L};[VS]VE{I|L}VN{I|L}K;[VS]VE{I|L}VQVK;[VS]VE{I|L}V[AG]KV;[VS]VE{I|L}V[KG]G{I|L};[VS]VE{I|L}VGG{I|L}K;[VS]VE{I|L}V[KG]AV;[{I|L}A]TE{I|L}VNK{I|L} 8.2776;7.6281;7.3564;7.3072;6.8796;6.7069;6.4515;6.386;6.2296;5.9667 +;-;-;-;-;-;-;-;-;- + 3236 + 1 0.995 200870.0 1.0 11315 5687 16992 HBL1_DMSO_200M_050219_1,17004 HBL1_DMSO_200M_050219_1,17004,SVVELVNKL True True SVVELVNKL 81.869546 500.80528563261 3619652.75 16992.0 ENSG00000128335|ENST00000358502|APOL2 5.498037020365397 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17005 81.877 442.0 527960.0 25 0 98086.0 -1 0 150 641.0575750939919 2560.201194509568 4 641.3069335818291 MULTI CID FTMS 0 0 0 16992 219462.9375 0.6548320716393884 -1 0.040191650390625 13 3 DVH{I|L}KD[YR]ES[DV]A{M(Oxidation (M))|F}CC 16 -1 68.682 0.0 0.0 2.6827 0.0 0.0 661.3194112083512 0.0 661.3194112083512 0.0 26.511707888880466 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3807196863200844 DVH{I|L}KD[YR]ES[DV]A{M(Oxidation (M))|F}CC 2.6827 - 3822 1 0.995 172647.7 1.0 11316 5687 16992 HBL1_DMSO_200M_050219_1,17005 HBL1_DMSO_200M_050219_1,17005, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17006 81.879 74.0 1538200.0 25 0 286310.0 + -1 TTLRWCCA 8 137 534.2410642940555 1066.467575654911 2 534.2399780154228 MULTI CID FTMS 0 0 0 16992 203011.9375 0.9406489198159876 1 -0.1273651123046875 14 2 Carbamidomethyl (C) _TTLRWC(Carbamidomethyl (C))C(Carbamidomethyl (C))A_ REV__ENST00000372819.5_1_20:43566725-43581329:+|nuORF;REV__ENST00000372826.6_1_20:43566725-43587002:+|nuORF 14.581692164780916 0.6954967302934248 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}VN{I|L}{I|L} 8 -1 32.029 0.0 0.0 3.0033 0.0 0.0 0.0 113.90303888920724 113.90303888920724 3.620741294760293 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}VN{I|L}{I|L} 3.0033 - 2577 1 0.995 92161.7 1.0 11317 5687 16992 HBL1_DMSO_200M_050219_1,17006 HBL1_DMSO_200M_050219_1,17006,TTLRWCCA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17007 81.888 492.0 492710.0 25 0 30288.0 + 29545 QLPELFHKI 9 219 562.8267392176907 1123.638925502181 2 562.8273803591728 MULTI CID FTMS 0 0 0 16992 197424.109375 0.4716500996855826 1 -0.1273651123046875 15 Unmodified _QLPELFHKI_ ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-5|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2 36.506200033944 0.094635877243972 3 Q{I|L}PE{I|L}{M(Oxidation (M))|F}HK{I|L} 9 0 + 70.733 0.0 0.0 6.295 6.295 86.49 0.0 0.0 0.0 21.249387366083 7.160033436348002 7.160033436348002 7.160033436348002 0 0.5941876774005248 2.0 0.0 0.0 + + Q{I|L}PE{I|L}{M(Oxidation (M))|F}HK{I|L};Q{I|L}PE{I|L}{M(Oxidation (M))|F}H{I|L}K;Q{I|L}{I|L}[EP]{M(Oxidation (M))|F}HK{I|L};Q{I|L}{I|L}[EP]{M(Oxidation (M))|F}H{I|L}K;Q{I|L}PEVV[VP]M{I|L};Q{I|L}P[PG][K{I|L}]QM{I|L};Q{I|L}PE{I|L}{[VA]|[{I|L}G]}{[NV]|[RG]}AA;Q{I|L}P[PG]P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{I|L};Q{I|L}{I|L}[HA][KC]AK{I|L};Q{I|L}PEVV[VP]{M(Oxidation (M))|F}P 6.295;5.6578;5.492;4.8547;3.5231;3.3664;3.1627;3.0617;3.0241;2.7937 +;-;-;-;-;-;-;-;-;- + 2863 + 1 0.995 182636.3 1.0 11318 5687 16992 HBL1_DMSO_200M_050219_1,17007 HBL1_DMSO_200M_050219_1,17007,QLPELFHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17008 81.898 608.0 948300.0 25 0 140070.0 + 40239 VGSLLRLI 8 174 435.79233848986246 869.5701240465249 2 435.7934142947197 MULTI CID FTMS 0 0 0 16992 191055.25 0.567411488244837 -1 0.040191650390625 16 Unmodified _VGSLLRLI_ REV__ENSG00000108506|ENST00000251334|INTS2;REV__nc|ENSG00000108506|Q9H0H0|INTS2 97.07464715276576 0.0801514622860046 3 {I|L}DK{I|L}R{I|L}{I|L} 7 -1 + 100.75 0.0 0.0 11.586 11.586 88.873 0.0 0.0 0.0 79.1467670607969 13.309932190414244 13.309932190414244 3.3226467981605623 0 1.9361818737241727 2.0 0.3252574989159953 1.066901560044258 {I|L}DK{I|L}R{I|L}{I|L};{I|L}D{I|L}KR{I|L}{I|L};{I|L}DK{I|L}{I|L}R{I|L};{I|L}D{I|L}K{I|L}R{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}R{I|L}{I|L};{I|L}{I|L}DKR{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}[VG]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}KR{I|L}{I|L}{I|L};{I|L}{I|L}DK{I|L}R{I|L};[VG]S{I|L}{I|L}R{I|L}{I|L} 11.586;11.204;11.057;10.675;9.2606;8.2115;8.1876;7.7902;7.6826;7.0122 -;-;-;-;-;-;-;-;-;+ + 922 + 1 0.995 441331.2 1.0 11319 5687 16992 HBL1_DMSO_200M_050219_1,17008 HBL1_DMSO_200M_050219_1,17008,VGSLLRLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17009 81.908 468.0 334740.0 25 0 16701.0 + 30660 RFPEELTQTF 10 165 634.3192064214766 1266.623859909753 2 634.3204223513603 MULTI CID FTMS 0 0 0 16992 182790.171875 0.2235414754866958 -24 1.4052963256835938 17 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 55.23464941255904 0.0494277333541689 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[TP]E{I|L}TQT{M(Oxidation (M))|F} 11 3 + 87.631 0.0 0.0 6.9185 6.9185 83.556 0.0 0.0 0.0 11.81843587944772 16.575773191777927 11.81843587944772 3.0102999566398125 0 1.1643943297944483 1.6989700043360187 0.7742275032520141 0.3252574989159953 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[TP]E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{[VA]|[{I|L}G]}E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SE[TP]{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SAQQ{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[RE]|[WV]}E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DT[TP]{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};[{I|L}A]{M(Oxidation (M))|F}[TP]E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[TP]T{I|L}EQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[TP]E{I|L}T[AG]T{M(Oxidation (M))|F} 6.9185;6.6808;6.4431;6.4431;6.3993;6.2055;6.1616;5.9854;5.9678;5.941 -;-;-;-;-;-;-;-;-;- 9364 1 0.995 120508.2 1.0 11320 5687 16992 HBL1_DMSO_200M_050219_1,17009 HBL1_DMSO_200M_050219_1,17009,RFPEELTQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17010 81.914 343.0 184300.0 25 0 10684.0 -1 0 94 965.9566741474762 0 965.9576293826104 PEAK CID FTMS 0 0 0 16992 163377.296875 1.0 0 0.0 18 3 PN{I|L}NADPWT{I|L}[NS]Q 13 -1 57.041 0.0 0.0 2.9557 0.0 0.0 261.0804289204576 215.10431848697505 476.1847474074326 0.0 0.0 0.0 0.0 0 1.0 0.0 1.642159058960253 1.1861818737241734 PN{I|L}NADPWT{I|L}[NS]Q 2.9557 - 6195 + 1 0.995 47719.7 1.0 11321 5687 16992 HBL1_DMSO_200M_050219_1,17010 HBL1_DMSO_200M_050219_1,17010, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17011 81.921 404.0 482780.0 25 0 33705.0 -1 PLCTLSFRLN 10 155 610.8256967678317 1219.6368406024633 2 610.8273803591728 MULTI CID FTMS 0 0 0 16992 174971.109375 0.2307648033480929 -4 0.31146240234375 19 Carbamidomethyl (C) _PLC(Carbamidomethyl (C))TLSFRLN_ ENSG00000179104|ENST00000321196|TMTC2;ENST00000551915.5_1_12:83081308-83379891:+|nuORF 18.1463463914782 0.5430639438673815 3 [VP]SGM{I|L}TV[QA]{[MS]|[{M(Oxidation (M))|F}A]} 12 -1 + 33.091 0.0 0.0 2.7132 2.7132 49.691 0.0 0.0 0.0 10.88554074136318 14.569290938659048 10.88554074136318 0.0 0 0.0 0.7958800173440752 1.1643943297944483 0.0 [VP]SGM{I|L}TV[QA]{[MS]|[{M(Oxidation (M))|F}A]};[VP]SGM{I|L}TV[KA]{[MS]|[{M(Oxidation (M))|F}A]};[VP]SGM{I|L}T[KG]{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[VP]SGM{I|L}T{[QG]|[NA]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[VP]SGRN{M(Oxidation (M))|F}{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[VP]SGR{I|L}{M(Oxidation (M))|F}N{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[VP]SGM{I|L}S{I|L}[QA]{[MS]|[{M(Oxidation (M))|F}A]};[VP]SGM{I|L}S{I|L}[KA]{[MS]|[{M(Oxidation (M))|F}A]};[VP]SGM{I|L}T{I|L}[KG]{[MS]|[{M(Oxidation (M))|F}A]};[VP]SGM{I|L}T{I|L}{[QG]|[NA]}{[MS]|[{M(Oxidation (M))|F}A]} 2.7132;2.7132;2.6944;2.6944;2.4045;2.1728;2.1217;2.1217;2.1213;2.1213 -;-;-;-;-;-;-;-;-;- 2990 1 0.995 142882.8 1.0 11322 5687 16992 HBL1_DMSO_200M_050219_1,17011 HBL1_DMSO_200M_050219_1,17011,PLCTLSFRLN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17012 81.929 400.0 147930.0 25 0 7636.9 + -1 IHVCREAHVPL 11 133 665.8530761599541 0 665.8530761599541 PEAK CID FTMS 0 0 0 -1 0 20 Carbamidomethyl (C) _IHVC(Carbamidomethyl (C))REAHVPL_ REV__ENST00000336078.8_1_18:56620973-56646315:+|nuORF 10.799506525563784 0.4428795054024277 3 E 1 -1 2.8309 0.0 0.0 0.2129 0.0 0.0 535.3103870837768 662.3156221979124 1197.6260092816892 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 E 0.2129 + + 11 + 1 0.995 49623.7 1.0 11323 5687 16992 HBL1_DMSO_200M_050219_1,17012 HBL1_DMSO_200M_050219_1,17012,IHVCREAHVPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17014 81.933 5.1 6080000.0 25 0 376070.0 -1 0 48 881.4140406640831 1760.8135283949662 2 881.4146606326103 MULTI CID FTMS 0 0 0 17013 8826145.0 0.2178883172109489 2 -0.1375045776367187 1 3 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 12 -1 53.018 0.0 0.0 3.011 0.0 0.0 358.2172375739761 0.0 358.2172375739761 0.0 42.56080052348942 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 3.011 - 329 + 1 0.995 30617.5 1.0 11324 5688 17013 HBL1_DMSO_200M_050219_1,17014 HBL1_DMSO_200M_050219_1,17014, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17015 81.934 7.1 6569700.0 25 0 705410.0 + 40989 VMAPRTLLL 9 69 507.3124166869351 1012.6102804406702 2 507.3127624392509 MULTI CID FTMS 0 0 0 17013 6345715.5 0.2105757397509626 4 -0.2963638305664062 2 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 36.506200033944 0.094635877243972 3 VMAP 4 5 58.8 0.0 0.0 5.8068 0.0 0.0 0.0 611.3837984674436 611.3837984674436 23.57840941039747 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMAP 5.8068 + + 41 + 1 0.995 40663.9 1.0 11325 5688 17013 HBL1_DMSO_200M_050219_1,17015 HBL1_DMSO_200M_050219_1,17015,VMAPRTLLL True True VMAPRTLLL 81.933871 507.312762439251 1153412864.0 17013.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 3.367042740186056 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17016 81.935 7.1 9926600.0 25 0 1648100.0 + 9897 FPFYGKPMRI 10 68 419.2266611861339 1254.6581541586015 3 419.2267944216728 MULTI CID FTMS 0 0 0 17013 6221188.0 0.5110849757223489 -4 0.3427734375 3 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 32.78568957990786 0.2337485590374503 3 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 67.612 0.0 0.0 5.3889 0.0 0.0 119.07409865547032 0.0 119.07409865547032 0.0 56.18562527100117 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.3889 - 202 1 0.995 63613.1 1.0 11326 5688 17013 HBL1_DMSO_200M_050219_1,17016 HBL1_DMSO_200M_050219_1,17016,FPFYGKPMRI False True FPFYGKPMRI 81.93505 419.226794421673 5081184256.0 17013.0 ENSG00000125870|ENST00000246071|SNRPB2 6.340354283650716 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17017 81.936 8.8 4321000.0 25 0 486710.0 + 8686 EVITKFINV 9 72 531.8131510810317 1061.6117492288631 2 531.8130370974541 MULTI CID FTMS 0 0 0 17013 5210281.0 0.4749636549335396 2 -0.1375045776367187 4 Unmodified _EVITKFINV_ ENSG00000152689|ENST00000403687|RASGRP3;nc|ENSG00000152689|Q8IV61-2|RASGRP3 65.23502041540118 0.0231836506122253 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}T 4 5 43.812 0.0 0.0 4.127 0.0 0.0 0.0 616.3468552938298 616.3468552938298 17.259818387193057 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}{I|L}T 4.127 + + 179 + 1 0.995 37081.1 1.0 11327 5688 17013 HBL1_DMSO_200M_050219_1,17017 HBL1_DMSO_200M_050219_1,17017,EVITKFINV True True EVITKFINV 81.936229 531.813037097454 214024536.0 17013.0 ENSG00000152689|ENST00000403687|RASGRP3;;nc|ENSG00000152689|Q8IV61-2|RASGRP3;;chr2:33524052-33524435|11|17.0|0.18|6.57|+|0|RASGRP3,None|1 6.377331574757894 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17018 81.937 17.0 3538400.0 25 0 450570.0 + 23056 LSLGLFPPLK 10 65 542.8395132948835 1083.664473656567 2 542.8397704958916 MULTI CID FTMS 0 0 0 17013 2461723.25 0.3380517010842078 2 -0.1375045776367187 5 Unmodified _LSLGLFPPLK_ REV__ENST00000369781.8_3_1:110924330-110925491:-|nuORF 21.53697664764585 0.484802182336468 3 {I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}G 6 -1 32.664 0.0 0.0 3.0142 0.0 0.0 0.0 409.2109774225219 409.2109774225219 21.243816808061545 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}G 3.0142 - 97 + 1 0.995 53005.1 1.0 11328 5688 17013 HBL1_DMSO_200M_050219_1,17018 HBL1_DMSO_200M_050219_1,17018,LSLGLFPPLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17019 81.939 24.0 2230300.0 25 0 373950.0 + 1700 ALPLSEGTH 9 68 462.7438414389623 923.4731299447244 2 462.7439147830009 MULTI CID FTMS 0 0 0 17013 2364840.5 0.4972084017698028 2 -0.1375045776367187 6 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 15.847184025352805 0.4077185912009129 3 [{I|L}A]P{I|L} 4 -1 38.94 0.0 0.0 4.2167 0.0 0.0 0.0 526.1924532525999 526.1924532525999 26.72167511924052 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.2167 + + 21 + 1 0.995 46237.9 1.0 11329 5688 17013 HBL1_DMSO_200M_050219_1,17019 HBL1_DMSO_200M_050219_1,17019,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17020 81.94 24.0 3579400.0 25 0 753450.0 + 11397 GGLVIWPNLV 10 101 534.3160850614504 1066.6176171897007 2 534.3157836794853 MULTI CID FTMS 0 0 0 17013 2207698.5 0.0381418317338182 -4 0.3427734375 7 Unmodified _GGLVIWPNLV_ REV__ENSG00000086475|ENST00000327347|SEPHS1;REV__nc|ENSG00000086475|P49903-2|SEPHS1;REV__nc|ENSG00000086475|P49903-3|SEPHS1;REV__nc|ENSG00000086475|P49903-4|SEPHS1 36.04419817259434 0.1993394420055842 3 [H{I|L}]{M(Oxidation (M))|F}{I|L}VN{I|L}{I|L}V 9 -1 + 62.138 0.0 0.0 5.8257 5.8257 79.719 0.0 0.0 0.0 2.9419057113367586 16.478174818886373 2.9419057113367586 2.9419057113367586 0 0.3807196863200844 0.7958800173440752 0.0 0.6549471895720984 [H{I|L}]{M(Oxidation (M))|F}{I|L}VN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}VHYP{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]VN{I|L}{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}VN{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}V{I|L}N{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}V[WP]N{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}VN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]V{I|L}N{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}VN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]VGG{I|L}{I|L}V 5.8257;5.5499;5.4161;5.3742;5.092;4.9688;4.9646;4.6824;4.6676;4.5528 -;-;-;-;-;-;-;-;-;- 1096 1 0.995 70838.6 1.0 11330 5688 17013 HBL1_DMSO_200M_050219_1,17020 HBL1_DMSO_200M_050219_1,17020,GGLVIWPNLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17021 81.941 29.0 2338200.0 25 0 263180.0 + 3351 AYPEIVAVY 9 83 512.7711662434562 1023.5277795537124 2 512.7718383669853 MULTI CID FTMS 0 0 0 17013 2085305.25 0.7984383721171764 -1 0.1273651123046875 8 Unmodified _AYPEIVAVY_ ENSG00000178295|ENST00000381254|GEN1 28.486842064014134 0.1687311288560894 3 [EP]{I|L}VAAYVY 9 4 + 46.048 0.0 0.0 4.499 4.499 54.006 0.0 0.0 0.0 4.762036441594191 26.83992802389298 4.762036441594191 0.0 0 0.8935078169319297 0.0 0.0 0.0 [EP]{I|L}VAAYVY;[EP]{I|L}VAYAVY;[EP]{I|L}AVYAVY;[EP]{I|L}AVAYVY;[EP]{I|L}G{I|L}YAVY;[EP]{I|L}G{I|L}AYVY;[EP]V{I|L}AYAVY;[EP]{I|L}AYVAVY;[EP]V{I|L}AAYVY;{[VA]|[{I|L}G]}EP{I|L}AYVY 4.499;4.499;4.2049;4.2049;3.9107;3.9107;3.7387;3.7387;3.7387;3.4739 -;-;-;-;-;-;-;-;-;- 425 1 0.995 56269.1 1.0 11331 5688 17013 HBL1_DMSO_200M_050219_1,17021 HBL1_DMSO_200M_050219_1,17021,AYPEIVAVY False True AYPEIVAVY 81.940944 512.771838366985 68157624.0 17013.0 ENSG00000178295|ENST00000381254|GEN1 5.583118120829265 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17022 81.942 61.0 1764200.0 25 0 287810.0 -1 LADSLQMF 8 89 470.7265013201815 939.438449707163 2 470.7263366580009 MULTI CID FTMS 0 0 0 17013 1973991.75 0.4893621847509867 2 -0.1375045776367187 9 Oxidation (M) _LADSLQM(Oxidation (M))F_ ENSG00000184677|ENST00000375647|ZBTB40;nc|ENSG00000184677|Q9NUA8-2|ZBTB40 23.1484247019978 0.5573009939494978 3 {I|L}A 2 -1 43.711 0.0 0.0 4.6529 0.0 0.0 0.0 752.2943960087701 752.2943960087701 18.64970648723208 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}A 4.6529 + + 64 + 1 0.995 90113.6 1.0 11332 5688 17013 HBL1_DMSO_200M_050219_1,17022 HBL1_DMSO_200M_050219_1,17022,LADSLQMF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17023 81.944 32.0 1899000.0 25 0 179530.0 + 3071 AVMEQIPEI 9 80 515.2678635897037 1028.5211742462072 2 515.2682372927666 MULTI CID FTMS 0 0 0 17013 1947239.375 0.6356828808988698 -3 0.273040771484375 10 Unmodified _AVMEQIPEI_ ENSG00000124571|ENST00000265351|XPO5;ENST00000455854.2_1_6:43491608-43492751:-|nuORF 52.268347100219714 0.0353964759249114 3 {[VA]|[{I|L}G]}MEAG{I|L} 7 4 44.161 0.0 0.0 4.2937 0.0 0.0 0.0 354.1672063109135 354.1672063109135 20.860563821734104 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 {[VA]|[{I|L}G]}MEAG{I|L} 4.2937 - 429 1 0.995 55301.7 1.0 11333 5688 17013 HBL1_DMSO_200M_050219_1,17023 HBL1_DMSO_200M_050219_1,17023,AVMEQIPEI True True AVMEQIPEI 81.943641 515.268237292767 65687264.0 17013.0 ENST00000455854.2_1_6:43491608-43492751:-|nuORF;;ENSG00000124571|ENST00000265351|XPO5 3.9871304035186768 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17024 81.945 28.0 1821600.0 25 0 315380.0 + 32499 SALGYLHSL 9 75 480.7609550957986 959.5073572583972 2 480.7610961794853 MULTI CID FTMS 0 0 0 17013 1864995.875 0.654624144434625 2 -0.1375045776367187 11 Unmodified _SALGYLHSL_ ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1 52.268347100219714 0.0353964759249114 3 {[SA]|[TG]}{I|L}GY{I|L}HTV 9 2 + 70.983 0.0 0.0 7.3979 7.3979 84.352 0.0 0.0 0.0 24.13734275855269 2.8523572848074963 2.8523572848074963 2.8523572848074963 0 0.7742275032520141 1.6989700043360187 1.1549471895720984 0.0 {[SA]|[TG]}{I|L}GY{I|L}HTV;{[SA]|[TG]}{I|L}GY{I|L}HS{I|L} 7.3979;7.1006 -;+ + 166 + 1 0.995 45457.9 1.0 11334 5688 17013 HBL1_DMSO_200M_050219_1,17024 HBL1_DMSO_200M_050219_1,17024,SALGYLHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17025 81.948 184.0 1041300.0 25 0 80171.0 + 3108 AVPDLYFENA 10 156 569.7743475195995 1137.5341421059989 2 569.7747070193291 MULTI CID FTMS 0 0 0 17013 1272192.125 0.7348371923667896 4 -0.2963638305664062 12 Unmodified _AVPDLYFENA_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 49.93300154707207 0.0805441195901191 3 [DP]{I|L}Y{M(Oxidation (M))|F}EDA 8 3 64.144 0.0 0.0 5.6388 0.0 0.0 0.0 184.1003401863301 184.1003401863301 20.436368969388425 0.0 0.0 0.0 0 0.0 0.958607314841775 1.341129063296272 0.0 [DP]{I|L}Y{M(Oxidation (M))|F}EDA 5.6388 - 3355 1 0.995 151397.2 1.0 11335 5688 17013 HBL1_DMSO_200M_050219_1,17025 HBL1_DMSO_200M_050219_1,17025,AVPDLYFENA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17026 81.953 267.0 1045900.0 25 0 243450.0 + 20903 LMTSFGPLQP 10 183 545.7822580914914 0 545.7823364138603 PEAK CID FTMS 0 0 0 17013 664963.875 0.3437934733338132 -3 0.273040771484375 13 Unmodified _LMTSFGPLQP_ ENST00000489602.1_1_3:157213259-157223189:-|nuORF 46.020951573049366 0.0708370373963976 3 A{M(Oxidation (M))|F}{M(Oxidation (M))|F}TPS 6 7 34.987 0.0 0.0 3.2111 0.0 0.0 285.16346613022614 151.05182825260002 436.2152943828262 0.0 0.0 0.0 0.0 0 0.2614393726401688 0.0 2.048455006504028 0.0 A{M(Oxidation (M))|F}{M(Oxidation (M))|F}TPS 3.2111 - 1995 + 1 0.995 222689.6 1.0 11336 5688 17013 HBL1_DMSO_200M_050219_1,17026 HBL1_DMSO_200M_050219_1,17026,LMTSFGPLQP True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17027 81.956 114.0 344430.0 25 0 49686.0 + -1 VWLRVKMQKPG 11 71 692.4008608991833 1382.7871688651664 2 692.4011108279228 MULTI CID FTMS 0 0 0 17013 523989.21875 0.5610242905630279 -1 0.1273651123046875 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VWLRVKMQKPG_ REV__ENST00000477398.1_1_2:113593127-113594323:-|nuORF 1.1933415558491238 0.8695176722560516 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 0.995 37768.7 1.0 11337 5688 17013 HBL1_DMSO_200M_050219_1,17027 HBL1_DMSO_200M_050219_1,17027,VWLRVKMQKPG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17028 81.958 125.0 1099800.0 25 0 99975.0 + 22603 LPYHRIFIM 9 125 397.22309683609393 1188.6474611084818 3 397.2227355837822 MULTI CID FTMS 0 0 0 17013 531670.375 0.768676841985511 -1 0.1273651123046875 15 Unmodified _LPYHRIFIM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 36.506200033944 0.094635877243972 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}M 9 2 + 42.597 0.0 0.0 3.5837 3.5837 70.587 0.0 0.0 0.0 1.482514675045806 4.672940310928482 1.482514675045806 1.482514675045806 0 1.0924778212679485 1.6989700043360187 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}M;[{I|L}P]WNR{M(Oxidation (M))|F}{I|L}{I|L}M;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]{I|L}{I|L}{M(Oxidation (M))|F}{I|L}M;[{I|L}P]WNR{I|L}{M(Oxidation (M))|F}{I|L}M;[YV]{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};[YV]{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};[YV]{I|L}{M(Oxidation (M))|F}RN[HQ]{I|L};[YV]{M(Oxidation (M))|F}{I|L}RN[HQ]{I|L} 3.5837;3.4589;3.1823;3.0575;1.8063;1.4049;0.85684;0.45544 -;-;-;-;-;-;-;- 177 1 0.995 112850.4 1.0 11338 5688 17013 HBL1_DMSO_200M_050219_1,17028 HBL1_DMSO_200M_050219_1,17028,LPYHRIFIM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17029 81.96 43.0 886370.0 25 0 105330.0 27376 PIEAHHLSSI 10 72 552.2963752952535 1102.5781976573069 2 552.7952758669853 MULTI CID FTMS 0 0 0 17013 535861.4375 0.5616618668058606 2 -0.1375045776367187 16 Unmodified _PIEAHHLSSI_ ENSG00000173064|ENST00000682272|HECTD4;ENST00000311694.7_1_12:112687934-112711582:-|nuORF;nc|ENSG00000173064|Q9Y4D8-2|HECTD4;nc|ENSG00000173064|Q9Y4D8-3|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8-5|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4 7.289230182591677 0.6929195370588109 3 {I|L} 1 9 13.495 0.0 0.0 1.2239 0.0 0.0 971.4829960965632 0.0 971.4829960965632 0.0 1.690289377098786 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2239 + + 98 + 1 0.995 34480.2 1.0 11339 5688 17013 HBL1_DMSO_200M_050219_1,17029 HBL1_DMSO_200M_050219_1,17029,PIEAHHLSSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17030 81.965 311.0 712470.0 25 0 43907.0 + 15601 IPYQDLPHL 9 200 548.2950953149975 1094.575637696795 2 548.2969848513603 MULTI CID FTMS 0 0 0 17013 473289.96875 0.0849469211831833 7 -0.5411376953125 17 Unmodified _IPYQDLPHL_ ENSG00000074416|ENST00000265052|MGLL;ENST00000479967.5_1_3:127434467-127541990:-|nuORF;nc|ENSG00000074416|Q99685-2|MGLL;nc|ENSG00000074416|Q99685|MGLL 62.57269311338072 0.0246576765497938 3 {I|L}PYQD{I|L}PH{I|L} 9 0 + 80.773 0.0 0.0 7.3794 7.3794 93.729 0.0 0.0 0.0 53.605925060534574 12.587418566968154 12.587418566968154 13.455612550363796 0 1.2218487496163566 1.3010299956639813 0.3494850021680094 0.4247425010840047 + + {I|L}PYQD{I|L}PH{I|L};{I|L}PY[AG]D{I|L}PH{I|L};{I|L}PYQ[WY]{I|L}{I|L};{I|L}PYQ[QA][KT]{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEV{I|L}S{M(Oxidation (M))|F}{I|L};{I|L}PY[AG][WY]{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QD{I|L}{I|L}S{M(Oxidation (M))|F}{I|L};{I|L}P[KG]{[WN]|[YH]}MH{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]EV{I|L}S{M(Oxidation (M))|F}{I|L};{I|L}SA{[ET]|[MV]}D{I|L}PH{I|L} 7.3794;6.1501;4.7821;3.968;3.8613;3.5479;3.3555;3.1783;3.02;2.8953 +;-;-;-;-;-;-;-;-;- + 2898 + 1 0.995 173107.0 1.0 11340 5688 17013 HBL1_DMSO_200M_050219_1,17030 HBL1_DMSO_200M_050219_1,17030,IPYQDLPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17031 81.971 318.0 367020.0 25 0 43573.0 + 16941 KILPEEITNL 10 148 585.3422457432673 1168.6699385533343 2 585.3427001833916 MULTI CID FTMS 0 0 0 17013 455156.875 1.0 0 0.0 18 Unmodified _KILPEEITNL_ ENSG00000066557|ENST00000370952|LRRC40 49.52724829834842 0.0829255630816734 3 {I|L}{I|L}K[EP]E{I|L}TN{I|L} 10 2 + 49.746 0.0 0.0 4.2566 4.2566 79.693 0.0 0.0 0.0 7.653178901854432 10.511525224473807 7.653178901854432 7.047057244614479 0 0.6989700043360187 1.0457574905606752 0.3252574989159953 0.6861818737241735 {I|L}{I|L}K[EP]E{I|L}TN{I|L};{I|L}{I|L}K{[ET]|[MV]}[HT]TN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}QQ{I|L}TN{I|L};{[VA]|[{I|L}G]}G{I|L}{I|L}QQ{I|L}TN{I|L};{I|L}{I|L}K[EP]E{I|L}TGG{I|L};{I|L}{I|L}N{I|L}QQ{I|L}TN{I|L};[EP]E{I|L}[K{I|L}]{I|L}TN{I|L};{I|L}{I|L}{I|L}NQQ{I|L}TN{I|L};[K{I|L}]{I|L}[EP]E{I|L}TN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}QQ{I|L}TGG{I|L} 4.2566;3.6536;3.6017;3.5271;3.4724;3.2793;2.9826;2.9034;2.8285;2.8175 -;-;-;-;-;-;-;-;+;- + 1899 1 0.995 88874.2 1.0 11341 5688 17013 HBL1_DMSO_200M_050219_1,17031 HBL1_DMSO_200M_050219_1,17031,KILPEEITNL True True KILPEEITNL 81.970974 585.342700183392 6563427.5 17013.0 ENSG00000066557|ENST00000370952|LRRC40 4.686299641927083 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17032 81.977 358.0 1268900.0 25 0 111570.0 + + 21380 IPFISKEL 8 196 473.78386256935823 945.5531722055164 2 473.7839843630791 MULTI CID FTMS 0 0 0 17013 432445.0 0.4215465977289396 -3 0.273040771484375 19 Unmodified _LPFSSGILI_ nc|ENSG00000166200|P61201-2|COPS2;ENSG00000166200|ENST00000388901|COPS2 67.34385681178166 0.0221257235307089 3 {I|L}P{M(Oxidation (M))|F}{I|L}S[SG]{I|L}{I|L} 9 -1 + 73.689 0.0 0.0 7.7932 7.7932 87.737 0.0 0.0 0.0 29.4884747755262 5.366168751115097 5.366168751115097 4.423222963066678 0 1.579689690656103 1.3010299956639813 1.2198565171985376 0.0 {I|L}P{M(Oxidation (M))|F}{I|L}S[SG]{I|L}{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}S{[VA]|[{I|L}G]}S{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}S[TA]VV;{I|L}P{M(Oxidation (M))|F}{I|L}S{[VA]|[{I|L}G]}TV;{I|L}{I|L}M{I|L}S[SG]{I|L}{I|L};{I|L}{I|L}M{I|L}S{[VA]|[{I|L}G]}S{I|L};{I|L}{I|L}M{I|L}S[TA]VV;{I|L}{I|L}M{I|L}S{[VA]|[{I|L}G]}TV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}SKE{I|L}{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VV 7.7932;7.3254;7.2257;6.8762;6.8579;6.3901;6.2904;5.9409;5.8502;5.7551 -;-;-;-;-;-;-;-;-;- 5081 + 1 0.995 338761.7 1.0 11342 5688 17013 HBL1_DMSO_200M_050219_1,17032 HBL1_DMSO_200M_050219_1,17032,LPFSSGILI False False IPFISKEL 81.977416 473.783984363079 12933583.0 17013.0 nc|ENSG00000166200|P61201-2|COPS2;;ENSG00000166200|ENST00000388901|COPS2 2.658974011739095 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17033 81.986 466.0 980630.0 25 0 121960.0 -1 0 220 358.73902572556904 715.4634985179381 2 358.7383605837822 MULTI CID FTMS 0 0 0 17013 288599.75 0.4132847682735644 2 -0.1375045776367187 20 3 {[TV]|[{I|L}S]}MPAS 6 -1 34.979 0.0 0.0 4.8891 0.0 0.0 0.0 126.16421808264433 126.16421808264433 1.258407014995214 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.5471900568116776 0.0 {[TV]|[{I|L}S]}MPAS 4.8891 - 593 1 0.995 355490.3 1.0 11343 5688 17013 HBL1_DMSO_200M_050219_1,17033 HBL1_DMSO_200M_050219_1,17033, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17035 81.99 16.0 2402300.0 25 0 392280.0 + 44087 YIYDKDMEII 10 49 651.8178823417203 1301.6212117502405 2 651.8182861208916 MULTI CID FTMS 0 0 0 17034 3416305.5 0.8915109766280478 1 -0.0804367065429687 1 Unmodified _YIYDKDMEII_ ENSG00000124422|ENST00000261497|USP22;nc|ENSG00000124422|Q9UPT9-2|USP22 29.84058131909904 0.2982332456971691 3 [Y{I|L}]PMY{I|L}DY 8 7 57.587 0.0 0.0 4.4242 0.0 0.0 0.0 240.0993746393188 240.0993746393188 14.182889943787773 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.25 0.0 [Y{I|L}]PMY{I|L}DY 4.4242 - 157 + 1 0.995 40386.9 1.0 11344 5689 17034 HBL1_DMSO_200M_050219_1,17035 HBL1_DMSO_200M_050219_1,17035,YIYDKDMEII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17036 81.991 67.0 1231900.0 25 0 224440.0 -1 ALLETYCA 8 85 314.15316800795216 0 314.1531249880791 PEAK CID FTMS 0 0 0 17034 639397.125 0.2059999196164982 3 -0.2392959594726562 2 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 20.453626601364224 0.4093984001168845 3 A 1 -1 6.9897 0.0 0.0 1.116 0.0 0.0 470.1650568637575 82.06701074771718 552.2320676114746 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.116 + + 6 + 1 0.995 70958.9 1.0 11345 5689 17034 HBL1_DMSO_200M_050219_1,17036 HBL1_DMSO_200M_050219_1,17036,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17037 81.995 206.0 177700.0 25 0 35249.0 + 38419 TRKRRPTRTEP 11 63 699.4086727025749 1396.8027924719495 2 699.4091064333916 MULTI CID FTMS 0 0 0 17034 815537.8125 0.8132677281246391 -3 0.2246246337890625 3 Unmodified _TRKRRPTRTEP_ REV__ENST00000249373.7_1_7:128829191-128843254:+|nuORF 2.498486711656943 0.8633599123570009 3 {I|L}SA{M(Oxidation (M))|F} 4 -1 18.22 0.0 0.0 1.3044 0.0 0.0 697.4408672783935 278.11387048892817 975.5547377673216 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 {I|L}SA{M(Oxidation (M))|F} 1.3044 - 68 + 1 0.995 36352.2 1.0 11346 5689 17034 HBL1_DMSO_200M_050219_1,17037 HBL1_DMSO_200M_050219_1,17037,TRKRRPTRTEP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17038 81.997 54.0 366030.0 25 0 26815.0 + 26316 NRNANLFV 8 48 474.254659092628 946.494765252056 2 474.2541381716728 MULTI CID FTMS 0 0 0 17034 805319.75 0.46047840720577 -3 0.2246246337890625 4 Unmodified _NRNANLFV_ REV__ENSG00000117593|ENST00000649689|DARS2 5.230669730166228 0.792582437072536 3 V 1 -1 12.474 0.0 0.0 1.3179 0.0 0.0 829.4152649852576 0.0 829.4152649852576 0.0 9.3753063169585 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3179 + + 6 + 1 0.995 23277.4 1.0 11347 5689 17034 HBL1_DMSO_200M_050219_1,17038 HBL1_DMSO_200M_050219_1,17038,NRNANLFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17039 82.001 241.0 1124900.0 25 0 66509.0 15534 IPVPTITWI 9 193 520.3144726798404 1038.614392426481 2 520.3138305544853 MULTI CID FTMS 0 0 0 17034 705930.4375 0.4395366276404566 9 -0.7232894897460938 5 Unmodified _IPVPTITWI_ ENSG00000030304|ENST00000374448|MUSK;nc|ENSG00000030304|O15146-2|MUSK;nc|ENSG00000030304|O15146-3|MUSK 36.04419817259434 0.0971720506436186 3 {I|L}PPE{I|L}{I|L}MKV 9 6 + 70.426 0.0 0.0 6.7808 6.7808 88.043 0.0 0.0 0.0 15.174421277920672 7.201593034059577 7.201593034059577 7.201593034059577 0 1.5228787452803376 2.0 0.0 0.1989700043360188 {I|L}PPE{I|L}{I|L}MKV;{I|L}PPE{I|L}{I|L}MVK;{I|L}PV[HA]Y{I|L}KV;{I|L}PV[HA]Y{I|L}VK;{I|L}PPA[HV]PVP{I|L};{I|L}P[WE][R{I|L}]{I|L}{I|L};{I|L}PPA[HV]P{I|L}PV;{I|L}PV[HA]PPVP{I|L};{I|L}SK{I|L}DTH{I|L}{I|L};{I|L}PV[HA]PP{I|L}PV 6.7808;6.0874;3.7782;3.0848;2.431;2.4145;2.3519;2.3107;2.2807;2.2316 -;-;-;-;-;-;-;-;-;- 2509 + 1 0.995 217396.0 1.0 11348 5689 17034 HBL1_DMSO_200M_050219_1,17039 HBL1_DMSO_200M_050219_1,17039,IPVPTITWI True False SQLIDTHLL 82.001174 520.313830554485 3437751.5 17034.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 0.7944695154825846 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17040 82.007 299.0 923760.0 25 0 90686.0 5507 DLVGSHGIE 9 199 309.4904109860205 925.4494035582616 3 309.4902831912041 MULTI CID FTMS 0 0 0 17034 687092.625 0.5457145588751694 3 -0.2392959594726562 6 Unmodified _DLVGSHGIE_ nc|ENSG00000156239|Q9Y5N5-2|N6AMT1 16.942295170755138 0.3780752226737986 3 [{I|L}A]P 3 8 22.932 0.0 0.0 2.4779 0.0 0.0 0.0 641.2513613614357 641.2513613614357 6.478174818886373 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]P 2.4779 - 331 1 0.995 221901.2 1.0 11349 5689 17034 HBL1_DMSO_200M_050219_1,17040 HBL1_DMSO_200M_050219_1,17040,DLVGSHGIE False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17041 82.012 267.0 744000.0 25 0 99129.0 5322 DLESRTLSSY 10 182 585.7874755758179 1169.5603982184357 2 585.7880126833916 MULTI CID FTMS 0 0 0 17034 526304.1875 1.0 0 0.0 7 Unmodified _DLESRTLSSY_ ENSG00000254122|ENST00000398594|PCDHGB7;nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7 29.081581746732265 0.3152867722954398 3 G{I|L}WDC(Carbamidomethyl (C)){I|L} 6 8 24.614 0.0 0.0 2.1046 0.0 0.0 407.2399787454928 0.0 407.2399787454928 0.0 3.867773643408462 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L}WDC(Carbamidomethyl (C)){I|L} 2.1046 - 4064 + 1 0.995 148917.2 1.0 11350 5689 17034 HBL1_DMSO_200M_050219_1,17041 HBL1_DMSO_200M_050219_1,17041,DLESRTLSSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17042 82.018 332.0 737570.0 25 0 117850.0 + 7415 EGLKLMNL 8 181 459.2599384518214 916.5053239704428 2 459.2601196169853 MULTI CID FTMS 0 0 0 17034 455328.5 0.6401129441138214 -2 0.1844329833984375 8 Unmodified _EGLKLMNL_ ENSG00000177200|ENST00000447540|CHD9;ENST00000569225.5_1_16:53269177-53281416:+|nuORF;nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9 78.7280429016045 0.0974402130616148 3 {[DA]|[EG]}{I|L}K{I|L}MN{I|L} 8 0 + 76.653 0.0 0.0 8.3636 8.3636 94.279 0.0 0.0 0.0 8.517800207932467 8.517800207932467 8.517800207932467 9.262137858390815 0 1.6643943297944483 2.0 0.6643943297944485 0.0 + + {[DA]|[EG]}{I|L}K{I|L}MN{I|L};{[DA]|[EG]}{I|L}K{I|L}MGG{I|L};{[DA]|[EG]}{I|L}K{I|L}MQV;{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}MN{I|L};{[DA]|[EG]}{I|L}K{I|L}NM{I|L};[{I|L}A]DK{I|L}MN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}MGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}MK{I|L}AN{I|L};{[DA]|[EG]}{I|L}K{I|L}NP{M(Oxidation (M))|F};{[DA]|[EG]}{I|L}K{I|L}GGM{I|L} 8.3636;7.353;6.1692;6.1313;5.8769;5.233;5.1207;4.8267;4.6645;4.533 +;-;-;-;-;-;-;-;-;- + 1549 1 0.995 188614.6 1.0 11351 5689 17034 HBL1_DMSO_200M_050219_1,17042 HBL1_DMSO_200M_050219_1,17042,EGLKLMNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17043 82.02 106.0 556770.0 25 0 57318.0 -1 CMMGVFPPIS 10 100 549.2433920087988 1096.4722310843974 2 549.2442504763603 MULTI CID FTMS 0 0 0 17034 409191.125 0.7023068973499654 3 -0.2392959594726562 9 Oxidation (M) _CM(Oxidation (M))MGVFPPIS_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 14.838274106304384 0.5985701837916485 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}PV{[ES]|[DT]|[{I|L}C]}D 9 -1 + 41.098 0.0 0.0 3.7482 3.7482 74.334 0.0 0.0 0.0 12.816454216413309 12.24809656601387 12.24809656601387 3.4678748622465605 0 0.3807196863200844 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}PV{[ES]|[DT]|[{I|L}C]}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}[HK]{M(Oxidation (M))|F}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C))P{M(Oxidation (M))|F}V{[ES]|[DT]|[{I|L}C]}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[CG]{M(Oxidation (M))|F}PV{[ES]|[DT]|[{I|L}C]}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[CG]{M(Oxidation (M))|F}[HK]{M(Oxidation (M))|F}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[CG]P{M(Oxidation (M))|F}V{[ES]|[DT]|[{I|L}C]}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}P[TP][MT];{[{M(Oxidation (M))|F}C]|[YS]}[MD]{[MG]|[TS]}PPS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C))P{M(Oxidation (M))|F}[TP][MT];{[{M(Oxidation (M))|F}C]|[YS]}[MD]{[MG]|[TS]}PPTV 3.7482;3.4319;3.3852;2.9084;2.5872;2.5454;2.5145;2.2114;2.1516;1.9898 -;-;-;-;-;-;-;-;-;- 314 1 0.995 52242.6 1.0 11352 5689 17034 HBL1_DMSO_200M_050219_1,17043 HBL1_DMSO_200M_050219_1,17043,CMMGVFPPIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17044 82.025 284.0 452760.0 25 0 55836.0 14413 IFKKAREDTR 10 127 632.3618154390267 1262.709077944853 2 632.3626586794853 MULTI CID FTMS 0 0 0 17034 424743.5625 0.3800651892144857 7 -0.6000595092773438 10 Unmodified _IFKKAREDTR_ ENSG00000176102|ENST00000323959|CSTF3 9.38312468134398 0.6832340498775793 3 P 1 10 10.713 0.0 0.0 0.84844 0.0 0.0 1147.6452255662384 0.0 1147.6452255662384 0.0 0.2287874528033739 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.84844 - 173 + 1 0.995 100432.8 1.0 11353 5689 17034 HBL1_DMSO_200M_050219_1,17044 HBL1_DMSO_200M_050219_1,17044,IFKKAREDTR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17045 82.03 254.0 670570.0 25 0 122960.0 + 110 AAIPSLLNA 9 108 869.5096200540413 868.5023435874413 1 869.5131103396416 MULTI CID FTMS 0 0 0 17034 380561.4375 0.2350162717090566 -6 0.4958953857421875 11 Unmodified _AAIPSLLNA_ ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12 111.28704002717404 0.0050101734347035 3 [PS]{I|L}{I|L}AA{I|L}NA 9 5 + 78.858 0.0 0.0 9.0798 9.0798 86.672 0.0 0.0 0.0 8.907854813243986 14.973024840566474 8.907854813243986 2.557258092660433 0 0.8252574989159953 0.0 2.249618491916923 0.3494850021680094 [PS]{I|L}{I|L}AA{I|L}NA;[PS]{I|L}AA{I|L}{I|L}NA;[{I|L}P]S{I|L}AA{I|L}NA;[VP]T{I|L}AA{I|L}NA;[PS]{I|L}A{I|L}A{I|L}NA;[{I|L}P]SAA{I|L}{I|L}NA;[VP]TAA{I|L}{I|L}NA;[PS]{I|L}{I|L}AA{I|L}GGA;[PS]{I|L}{I|L}AAN{I|L}A;[PS]{I|L}AA{I|L}{I|L}GGA 9.0798;8.7853;8.0541;7.9952;7.8528;7.7597;7.7008;7.6171;7.3947;7.3227 -;-;-;-;-;-;-;-;-;- 3342 1 0.995 113360.1 1.0 11354 5689 17034 HBL1_DMSO_200M_050219_1,17045 HBL1_DMSO_200M_050219_1,17045,AAIPSLLNA True True AAIPSLLNA 82.029857 869.513110339642 19959872.0 17034.0 ENSG00000184634|ENST00000374080|MED12;;nc|ENSG00000184634|Q93074-2|MED12;;nc|ENSG00000184634|Q93074-3|MED12 6.511395295461019 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17046 82.035 300.0 589850.0 25 0 92265.0 -1 MHLSPMEAIL 10 197 579.2881166872413 1156.5616804412823 2 579.2888061404228 MULTI CID FTMS 0 0 0 17034 370673.15625 0.0583219061504722 -10 0.8136520385742188 12 Oxidation (M) _M(Oxidation (M))HLSPMEAIL_ ENSG00000184368|ENST00000379643|MAP7D2 39.957323273325 0.1580177220464651 3 [{I|L}T]{M(Oxidation (M))|F}S[{M(Oxidation (M))|F}E]ST{I|L}{I|L} 10 -1 + 48.682 0.0 0.0 4.2092 4.2092 80.394 0.0 0.0 0.0 8.2754001448697 13.304556918856456 8.2754001448697 8.2754001448697 0 0.3807196863200844 2.0 1.2302046884880935 0.0 [{I|L}T]{M(Oxidation (M))|F}S[{M(Oxidation (M))|F}E]ST{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[Y{M(Oxidation (M))|F}]T{I|L}{I|L};[{I|L}T]{M(Oxidation (M))|F}{[RE]|[WV]}{[YC]|[HE]}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}QDDP{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}D{NN|[MP]|[D{I|L}]|[EV]}DDP{I|L}{I|L};[VP][HD]P{[YC]|[HE]}T{I|L}{I|L};[VP][WY]{[YC]|[HE]}T{I|L}{I|L};[{I|L}T]{M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{[YC]|[HE]}{I|L};{[QN]|[E{I|L}]|[KN]}HP{[YC]|[HE]}[WP]{I|L};[VP][HD]PT{[YC]|[HE]}{I|L}{I|L} 4.2092;3.4937;3.4552;3.2455;3.1302;2.8874;2.8432;2.8277;2.7041;2.6739 -;-;-;-;-;-;-;-;-;- 4528 1 0.995 132799.8 1.0 11355 5689 17034 HBL1_DMSO_200M_050219_1,17046 HBL1_DMSO_200M_050219_1,17046,MHLSPMEAIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17047 82.04 255.0 774950.0 25 0 28945.0 -1 0 133 915.9332279812776 1829.8519030293555 2 915.9333984255792 MULTI CID FTMS 0 0 0 17034 339765.875 1.0 0 0.0 13 3 {[QV]|[N{I|L}]|[RA]|[KV]}YPTMQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 15 -1 + 92.515 0.0 0.0 5.0559 5.0559 55.834 0.0 0.0 0.0 5.373248495272492 47.52440216484637 5.373248495272492 0.0 0 0.2614393726401688 1.3979400086720375 0.4247425010840047 2.2658715643802765 {[QV]|[N{I|L}]|[RA]|[KV]}YPTMQQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YPTMQQDA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F}TMQQDA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F}TMQQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YPE[KC]QDA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YPE[KC]QDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F}E[KC]QDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F}E[KC]QDA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQDA{M(Oxidation (M))|F}YK[{I|L}V] 5.0559;5.0559;5.0405;5.0405;4.8042;4.8042;4.7889;4.7889;4.6741;4.6741 -;-;-;-;-;-;-;-;-;- 12583 1 0.995 133814.4 1.0 11356 5689 17034 HBL1_DMSO_200M_050219_1,17047 HBL1_DMSO_200M_050219_1,17047, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17048 82.048 360.0 635790.0 25 0 62478.0 + 38317 TQLASLPQI 9 199 485.7827346044468 969.5509162756936 2 485.7847167849541 MULTI CID FTMS 0 0 0 17034 299084.21875 0.4349594271859441 -6 0.4958953857421875 14 Unmodified _TQLASLPQI_ ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-2|DNA2;nc|ENSG00000138346|P51530-3|DNA2;nc|ENSG00000138346|P51530-4|DNA2 51.629811660486645 0.0367964933207742 3 {NN|[MP]|[D{I|L}]|[EV]}KKEQP{I|L} 8 7 + 43.67 0.0 0.0 4.5042 4.5042 83.68 0.0 0.0 0.0 12.75078213153984 8.33665758146875 8.33665758146875 9.880521827513526 0 0.3807196863200844 0.6020599913279624 0.7302046884880937 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}KKEQP{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}SGQP{I|L};{NN|[MP]|[D{I|L}]|[EV]}KKE[PG]A{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}SA{I|L}[NP];{NN|[MP]|[D{I|L}]|[EV]}KKE[AG]P{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}SANP{I|L};{NN|[MP]|[D{I|L}]|[EV]}KKE[PA]G{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}SPNA{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}SG[PG]A{I|L};{NN|[MP]|[D{I|L}]|[EV]}KGS{I|L}QP{I|L} 4.5042;3.4851;3.3213;3.1179;3.1108;2.9417;2.8522;2.3377;2.3078;2.2615 -;-;-;-;-;-;-;-;-;- 4796 + 1 0.995 171868.6 1.0 11357 5689 17034 HBL1_DMSO_200M_050219_1,17048 HBL1_DMSO_200M_050219_1,17048,TQLASLPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17049 82.054 332.0 300230.0 25 0 20092.0 + 22604 LPYHRIFIM 9 134 595.3310211031618 1188.6474892731237 2 595.3318969607353 MULTI CID FTMS 0 0 0 17034 275080.46875 1.0 0 0.0 15 Unmodified _LPYHRIFIM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 57.72198328787511 0.0273433238377839 3 {I|L}PYHR 5 4 58.276 0.0 0.0 4.9027 0.0 0.0 0.0 519.2594698541624 519.2594698541624 25.82432436185812 0.0 0.0 0.0 0 1.110924374808178 1.5228787452803376 0.0 0.0 + {I|L}PYHR 4.9027 + + 693 + 1 0.995 77496.7 1.0 11358 5689 17034 HBL1_DMSO_200M_050219_1,17049 HBL1_DMSO_200M_050219_1,17049,LPYHRIFIM True True LPYHRIFIM 82.053797 595.331896960735 7893497.0 17034.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 6.472401936848958 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17050 82.06 335.0 446190.0 25 0 28214.0 + 10714 FWPPQPKLY 9 157 588.3159560932772 1174.6173592533544 2 588.3149902224541 MULTI CID FTMS 0 0 0 17034 259911.203125 0.0424257060825132 -7 0.5828628540039062 16 Unmodified _FWPPQPKLY_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 36.04419817259434 0.0971720506436186 3 {[DS]|[MA]|[CV]|TT}KC(Carbamidomethyl (C))P 5 8 31.24 0.0 0.0 2.6596 0.0 0.0 0.0 584.3156098119293 584.3156098119293 7.326317226169813 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.8556270500406937 0.0 {[DS]|[MA]|[CV]|TT}KC(Carbamidomethyl (C))P 2.6596 - 1259 1 0.995 115525.3 1.0 11359 5689 17034 HBL1_DMSO_200M_050219_1,17050 HBL1_DMSO_200M_050219_1,17050,FWPPQPKLY True True FWPPQPKLY 82.059878 588.314990222454 8200562.5 17034.0 ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;nc|ENSG00000177731|Q13045-2|FLII;;nc|ENSG00000177731|Q13045-3|FLII 7.317615032196045 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17051 82.066 341.0 73777.0 25 0 4084.1 -1 0 67 683.0249511599541 0 683.0249511599541 PEAK CID FTMS 0 0 0 -1 0 17 3 C(Carbamidomethyl (C)) 1 -1 5.4846 0.0 0.0 0.40208 0.0 0.0 885.906609007605 315.0814608209594 1200.9880698285644 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.40208 - 3 + 1 0.995 28205.8 1.0 11360 5689 17034 HBL1_DMSO_200M_050219_1,17051 HBL1_DMSO_200M_050219_1,17051, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17053 82.07 0.5 103270000.0 25 0 8769500.0 + 3886 DALDKIRLI 9 60 528.8239744481274 1055.633395963055 2 528.8245117068291 MULTI CID FTMS 0 0 0 17052 79209264.0 0.5451038279320596 1 -0.072784423828125 1 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 47.594388314883695 0.0456443387682827 3 DA{I|L}DK{I|L}{I|L}[R{I|L}] 9 2 + 91.705 0.0 0.0 8.6872 8.6872 97.954 0.0 0.0 0.0 84.79872819733373 4.762036441594191 4.762036441594191 38.55265951879794 0 1.3807196863200843 1.6989700043360187 0.4247425010840047 0.3807196863200844 DA{I|L}DK{I|L}{I|L}[R{I|L}];{I|L}DADK{I|L}{I|L}[R{I|L}] 8.6872;5.0351 -;- 71 + 1 0.995 43549.5 1.0 11361 5690 17052 HBL1_DMSO_200M_050219_1,17053 HBL1_DMSO_200M_050219_1,17053,DALDKIRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17054 82.071 2.9 16242000.0 25 0 2297800.0 18685 LAIWEASL 8 69 451.7527689299804 901.4909849267608 2 451.7529174685478 MULTI CID FTMS 0 0 0 17052 12420333.0 0.1585327465243201 4 -0.35662841796875 2 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 42.96799951952854 0.1846367511955703 3 [{I|L}A][WE]S{I|L}A{I|L} 8 4 + 41.616 0.0 0.0 4.6164 4.6164 72.569 0.0 0.0 0.0 6.461280356782375 8.226825097560422 6.461280356782375 0.8765971170276288 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{I|L}CAD{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}PS{I|L}A{I|L};{[TV]|[{I|L}S]}[RD]D{I|L}A{I|L} 4.6164;4.5191;4.0871;3.8996;2.9797;2.0658 -;-;-;-;-;- 130 1 0.995 44212.5 1.0 11362 5690 17052 HBL1_DMSO_200M_050219_1,17054 HBL1_DMSO_200M_050219_1,17054,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17055 82.073 2.9 21947000.0 25 0 2079800.0 + 3893 DALDKIRLI 9 84 352.8853732487592 1055.6342903464777 3 352.8852111697197 MULTI CID FTMS 0 0 0 17052 13279169.0 0.3892939630095995 2 -0.1588592529296875 3 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 29.081581746732265 0.1611639662936252 3 {[DA]|[EG]}{I|L}DK{I|L}[R{I|L}]{I|L} 9 0 + 61.418 0.0 0.0 5.8181 5.8181 91.544 0.0 0.0 0.0 50.15875974122277 2.0065945054641787 2.0065945054641787 61.41781960619177 0 0.3252574989159953 2.0 0.3494850021680094 0.4247425010840047 + + {[DA]|[EG]}{I|L}DK{I|L}[R{I|L}]{I|L} 5.8181 + + 57 + 1 0.995 59187.4 1.0 11363 5690 17052 HBL1_DMSO_200M_050219_1,17055 HBL1_DMSO_200M_050219_1,17055,DALDKIRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17056 82.074 19.0 4545800.0 25 0 239130.0 + 9907 FPFYGKPMRI 10 72 628.3364646422485 1254.658376351297 2 628.3366577029228 MULTI CID FTMS 0 0 0 17052 2770996.25 0.6111764832381149 -8 0.663299560546875 4 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 61.357469665136826 0.0330252915653943 3 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 7 5 85.323 0.0 0.0 6.8005 0.0 0.0 0.0 399.1814669244751 399.1814669244751 50.37478848885982 0.0 0.0 0.0 0 1.25 2.0 0.0 0.7742275032520141 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 6.8005 - 559 + 1 0.995 70972.6 1.0 11364 5690 17052 HBL1_DMSO_200M_050219_1,17056 HBL1_DMSO_200M_050219_1,17056,FPFYGKPMRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17057 82.075 19.0 3865900.0 25 0 495540.0 + 19846 LHLDQPPLL 9 93 523.3041480219179 1044.5937431106356 2 523.8040649294853 MULTI CID FTMS 0 0 0 17052 2786803.5 0.6834530768531818 1 -0.072784423828125 5 Unmodified _LHLDQPPLL_ REV__ENSG00000197479|ENST00000354757|PCDHB11;REV__nc|ENSG00000197479|Q9Y5F2-2|PCDHB11 19.438996006549623 0.310492472477042 3 [H{I|L}]DH{I|L}{I|L} 6 -1 34.914 0.0 0.0 3.3424 0.0 0.0 0.0 313.17450970423266 313.17450970423266 1.2498396619465524 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3054621874040891 0.0 [H{I|L}]DH{I|L}{I|L} 3.3424 - 511 1 0.995 59672.5 1.0 11365 5690 17052 HBL1_DMSO_200M_050219_1,17057 HBL1_DMSO_200M_050219_1,17057,LHLDQPPLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17058 82.076 21.0 2324900.0 25 0 424440.0 41260 VPGRHQKLGK 10 63 560.3401147610329 1118.6656765888656 2 560.3403808474541 MULTI CID FTMS 0 0 0 17052 1971975.375 0.3540003753671543 -2 0.1375045776367187 6 Unmodified _VPGRHQKLGK_ ENST00000478406.5_1_1:227170215-227170924:+|nuORF 1.6526216038709556 0.7189921496796233 3 {I|L} 1 9 10.181 0.0 0.0 0.91011 0.0 0.0 987.5704292517548 0.0 987.5704292517548 0.0 1.5975670067899728 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.91011 + + 12 + 1 0.995 45656.7 1.0 11366 5690 17052 HBL1_DMSO_200M_050219_1,17058 HBL1_DMSO_200M_050219_1,17058,VPGRHQKLGK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17059 82.077 55.0 1489000.0 25 0 221770.0 + 42074 VQVVECFFLP 10 70 590.809000822903 0 590.8085815310478 PEAK CID FTMS 0 0 0 17052 1387250.75 0.6233044757033822 1 -0.072784423828125 7 Unmodified _VQVVECFFLP_ REV__ENSG00000161807|ENST00000541538|OR7G1 10.073929032068715 0.3742530088597855 3 {I|L}NYG 4 -1 18.197 0.0 0.0 1.5427 0.0 0.0 228.14696941545645 501.22178064517817 729.3687500606346 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}NYG 1.5427 - 123 + 1 0.995 70578.8 1.0 11367 5690 17052 HBL1_DMSO_200M_050219_1,17059 HBL1_DMSO_200M_050219_1,17059,VQVVECFFLP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17060 82.082 214.0 736870.0 25 0 51799.0 + -1 FFFYCLFCFVI 11 110 781.8653083742541 1561.7160638153082 2 781.8655273318291 MULTI CID FTMS 0 0 0 17052 929937.4375 0.4941805002784934 2 -0.1588592529296875 8 2 Carbamidomethyl (C) _FFFYC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))FVI_ REV__ENSG00000164197|ENST00000389100|RNF180 6.723162845929126 0.8434276150410019 3 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQV{I|L} 13 -1 + 107.36 0.0 0.0 6.8746 6.8746 87.419 0.0 0.0 0.0 6.320932639559388 16.642078980768062 6.320932639559388 6.320932639559388 0 0.8252574989159953 1.3979400086720375 0.2887254899964357 2.353917193908117 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QNA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ][C(Carbamidomethyl (C))K]ENA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS][AG]NA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QGGA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QNA{M(Oxidation (M))|F}Y[AG]V{I|L} 6.8746;6.4699;6.3442;6.2937;6.2937;6.2937;5.9617;5.8889;5.8889;5.8889 -;-;-;-;-;-;-;-;-;- 2137 1 0.995 113358.8 1.0 11368 5690 17052 HBL1_DMSO_200M_050219_1,17060 HBL1_DMSO_200M_050219_1,17060,FFFYCLFCFVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17061 82.087 274.0 1318900.0 25 0 119060.0 + 9981 FPHKPIILI 9 188 539.3445524616986 1076.6745519901972 2 539.3448974490166 MULTI CID FTMS 0 0 0 17052 615828.1875 0.3804490613190423 -2 0.1375045776367187 9 Unmodified _FPHKPIILI_ ENSG00000114982|ENST00000431828|KANSL3;ENST00000447759.5_3_2:97261350-97293793:-|nuORF;ENST00000487070.5_1_2:97267510-97285240:-|nuORF;ENST00000488907.5_1_2:97276365-97278231:-|nuORF;ENST00000597150.5_1_2:97261350-97297069:-|nuORF;nc|ENSG00000114982|Q9P2N6-2|KANSL3;nc|ENSG00000114982|Q9P2N6-4|KANSL3;nc|ENSG00000114982|Q9P2N6-5|KANSL3;nc|ENSG00000114982|Q9P2N6-6|KANSL3;nc|ENSG00000114982|Q9P2N6-8|KANSL3;nc|ENSG00000114982|Q9P2N6|KANSL3 64.23631603340823 0.0237365939569086 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HK{I|L}P{I|L}{I|L}{I|L} 9 2 + 66.79 0.0 0.0 6.2034 6.2034 84.347 0.0 0.0 0.0 7.148415687162952 14.973024840566469 7.148415687162952 5.228787452803374 0 1.841129063296272 1.0969100130080565 0.6139829889124311 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HK{I|L}P{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HK{I|L}{I|L}P{I|L}{I|L};{[TV]|[{I|L}S]}K{M(Oxidation (M))|F}{I|L}M{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}K{I|L}P{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}K{M(Oxidation (M))|F}{I|L}{I|L}M{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{M(Oxidation (M))|F}{I|L}P{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}K{I|L}{I|L}P{I|L}{I|L};{I|L}{I|L}PKHM{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{I|L}{I|L}M{I|L}{I|L}{I|L};[HK]P{M(Oxidation (M))|F}{I|L}P{I|L}{I|L}{I|L} 6.2034;5.7177;5.5394;5.4112;5.2598;5.1458;4.9255;4.8756;4.7922;4.7696 -;-;-;-;-;-;-;-;-;- 3872 1 0.995 270933.7 1.0 11369 5690 17052 HBL1_DMSO_200M_050219_1,17061 HBL1_DMSO_200M_050219_1,17061,FPHKPIILI True True FPHKPIILI 82.08662 539.344897449017 45448340.0 17052.0 ENST00000487070.5_1_2:97267510-97285240:-|nuORF;;nc|ENSG00000114982|Q9P2N6|KANSL3;;ENST00000447759.5_3_2:97261350-97293793:-|nuORF;;nc|ENSG00000114982|Q9P2N6-2|KANSL3;;nc|ENSG00000114982|Q9P2N6-4|KANSL3;;ENST00000597150.5_1_2:97261350-97297069:-|nuORF;;ENST00000488907.5_1_2:97276365-97278231:-|nuORF;;nc|ENSG00000114982|Q9P2N6-6|KANSL3;;nc|ENSG00000114982|Q9P2N6-8|KANSL3;;nc|ENSG00000114982|Q9P2N6-5|KANSL3;;ENSG00000114982|ENST00000431828|KANSL3 3.1067662239074707 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17062 82.092 304.0 1099400.0 25 0 74793.0 + 35587 STTVTLFKV 9 213 498.2931144968455 994.571676060491 2 498.2939941287041 MULTI CID FTMS 0 0 0 17052 612447.1875 0.0687730732502565 6 -0.519622802734375 10 Unmodified _STTVTLFKV_ nc|ENSG00000211899|P01871|IGHM 69.10491478415734 0.0214449631113747 3 {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV 9 0 + 60.57 0.0 0.0 6.09 6.09 82.965 0.0 0.0 0.0 5.642492736872597 4.432564409618927 4.432564409618927 4.432564409618927 0 0.8921590589602533 0.0 0.805462187404089 0.1989700043360188 + + {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV;{[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}VK;D{I|L}VPR{I|L}SVP;D{I|L}VPR{I|L}SPV;D{I|L}VPR{I|L}VSP;{[TV]|[{I|L}S]}T{I|L}{M(Oxidation (M))|F}KV{[MG]|[TS]};D{I|L}VP[VG]{I|L}SVP;{[MG]|[TS]}{I|L}{I|L}{M(Oxidation (M))|F}KV{[MG]|[TS]};D{I|L}VP[VG]{I|L}SPV;[{I|L}T]S{I|L}{M(Oxidation (M))|F}KV{[MG]|[TS]} 6.09;5.6444;4.3398;4.1167;3.7945;3.6923;3.414;3.2338;3.1909;2.9496 +;-;-;-;-;-;-;-;-;- + 3632 + 1 0.995 249208.5 1.0 11370 5690 17052 HBL1_DMSO_200M_050219_1,17062 HBL1_DMSO_200M_050219_1,17062,STTVTLFKV True True STTVTLFKV 82.092166 498.293994128704 345099724.0 17052.0 nc|ENSG00000211899|P01871|IGHM 6.411227385203044 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17063 82.095 129.0 1269100.0 25 0 89485.0 + 29544 QLPELFHKI 9 130 375.5537556797913 1123.639437639574 3 375.5535156130791 MULTI CID FTMS 0 0 0 17052 505480.875 0.4183027190498583 2 -0.1588592529296875 11 Unmodified _QLPELFHKI_ ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-5|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2 27.628801355627647 0.1796483985696185 3 [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}H{I|L}K 9 2 + 50.755 0.0 0.0 4.517 4.517 75.191 0.0 0.0 0.0 20.157942671832323 2.811453599014797 2.811453599014797 2.811453599014797 0 0.1923877696554315 1.3010299956639813 0.3494850021680094 0.2694484306402459 [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}H{I|L}K;[Q{I|L}]PE{I|L}{M(Oxidation (M))|F}HK{I|L};[Q{I|L}]{I|L}[EP]{M(Oxidation (M))|F}H{I|L}K;[Q{I|L}]PE{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}K;[Q{I|L}]{I|L}[EP]{M(Oxidation (M))|F}HK{I|L};[Q{I|L}]{I|L}[EP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}K;[Q{I|L}]P{M(Oxidation (M))|F}{I|L}{I|L}[TP]VP;[Q{I|L}]{I|L}K[YG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K 4.517;4.2668;3.4068;3.2128;3.1566;2.1026;1.4022;0.90556 -;+;-;-;-;-;-;- + 656 + 1 0.995 140334.0 1.0 11371 5690 17052 HBL1_DMSO_200M_050219_1,17063 HBL1_DMSO_200M_050219_1,17063,QLPELFHKI False True QLPELFHKI 82.094801 375.553515613079 62456081.0 17052.0 nc|ENSG00000069424|Q13303-2|KCNAB2;;nc|ENSG00000069424|Q13303-5|KCNAB2;;nc|ENSG00000069424|Q13303-4|KCNAB2;;nc|ENSG00000069424|Q13303|KCNAB2;;ENSG00000069424|ENST00000378083|KCNAB2 7.256994088490804 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17064 82.097 117.0 950380.0 25 0 131930.0 + 12682 GVLPNIQAV 9 117 455.7712203434208 909.5278877536416 2 455.7718078494072 MULTI CID FTMS 0 0 0 17052 483205.25 0.0073327908159006 18 -1.4393234252929688 12 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 44.40701690623563 0.0526327925666318 3 [NP]{I|L}QA 5 4 38.372 0.0 0.0 4.2188 0.0 0.0 0.0 383.2276145333057 383.2276145333057 14.409007046326463 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.7614393726401688 + [NP]{I|L}QA 4.2188 + + 856 1 0.995 87478.4 1.0 11372 5690 17052 HBL1_DMSO_200M_050219_1,17064 HBL1_DMSO_200M_050219_1,17064,GVLPNIQAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17065 82.104 351.0 765520.0 25 0 89752.0 + 19672 LGLHLLRL 8 175 467.8136475363835 933.612742139567 2 467.8138000369072 MULTI CID FTMS 0 0 0 17052 454204.125 0.1665286120835172 4 -0.35662841796875 13 Unmodified _LGLHLLRL_ REV__nc|ENSG00000094975|Q9UBS9-2|SUCO 67.03532852164291 0.116292309877964 3 HA{I|L}V{I|L}{I|L}R{I|L} 8 -1 + 97.196 0.0 0.0 10.411 10.411 96.108 0.0 0.0 0.0 24.731975075880328 12.153522926561765 12.153522926561765 10.0 0 2.385151878060192 1.6989700043360187 0.0 0.9802046884880936 HA{I|L}V{I|L}{I|L}R{I|L};HA{I|L}{I|L}V{I|L}R{I|L};HA{I|L}V{I|L}{I|L}{I|L}R;HA{I|L}{I|L}V{I|L}{I|L}R;{I|L}HAV{I|L}{I|L}R{I|L};H{I|L}AV{I|L}{I|L}R{I|L};{I|L}HA{I|L}V{I|L}R{I|L};H{I|L}A{I|L}V{I|L}R{I|L};[HA]{I|L}V{I|L}{I|L}R{I|L};{I|L}HAV{I|L}{I|L}{I|L}R 10.411;9.3396;9.1089;8.0378;7.7617;7.7329;6.6905;6.6618;6.5805;6.4599 -;-;-;-;-;-;-;-;-;- 599 + 1 0.995 200824.8 1.0 11373 5690 17052 HBL1_DMSO_200M_050219_1,17065 HBL1_DMSO_200M_050219_1,17065,LGLHLLRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17066 82.111 394.0 609080.0 25 0 68176.0 -1 0 190 336.1045918213961 670.1946307095923 2 336.1048766970634 MULTI CID FTMS 0 0 0 17052 448290.40625 0.1322839036950801 6 -0.519622802734375 14 3 {I|L} 1 -1 11.109 0.0 0.0 1.6576 0.0 0.0 539.0996732894736 0.0 539.0996732894736 0.0 3.929993723234516 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.6576 - 26 + 1 0.995 187444.1 1.0 11374 5690 17052 HBL1_DMSO_200M_050219_1,17066 HBL1_DMSO_200M_050219_1,17066, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17067 82.117 376.0 655210.0 25 0 103810.0 + 1232 AIIPRVPSL 9 155 483.3108134442026 0 483.3109008669853 PEAK CID FTMS 0 0 0 17052 362271.6875 0.199563046441559 -5 0.4105453491210937 15 Unmodified _AIIPRVPSL_ ENSG00000152464|ENST00000378197|RPP38 60.07390631473393 0.0167981024283326 3 {I|L}{I|L}[TP]{I|L}DG 7 6 34.614 0.0 0.0 3.5884 0.0 0.0 184.12031776033808 68.0514162652953 252.17173402563336 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 1.9731975075880328 0.0 {I|L}{I|L}[TP]{I|L}DG 3.5884 - 549 + 1 0.995 187048.2 1.0 11375 5690 17052 HBL1_DMSO_200M_050219_1,17067 HBL1_DMSO_200M_050219_1,17067,AIIPRVPSL True True AIIPRVPSL 82.117361 483.310900866985 94884108.0 17052.0 ENSG00000152464|ENST00000378197|RPP38 4.3393847942352295 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17068 82.119 86.0 1089100.0 25 0 176170.0 + 14540 IGYRPGVLL 9 127 494.3012602014158 986.5879674696316 2 494.3008911013603 MULTI CID FTMS 0 0 0 17052 354507.46875 0.5505830213558035 -1 0.0804367065429687 16 Unmodified _IGYRPGVLL_ REV__ENSG00000169933|ENST00000675598|FRMPD4;REV__nc|ENSG00000169933|Q14CM0|FRMPD4 23.1484247019978 0.2366544122328345 3 [DV]VKMAV{I|L}{I|L} 9 -1 + 37.022 0.0 0.0 3.7525 3.7525 71.498 0.0 0.0 0.0 3.4872198600185627 8.824995917031945 3.4872198600185627 1.7609125905568137 0 0.8182503180159344 0.744727494896694 0.0 0.0 [DV]VKMAV{I|L}{I|L};[DV]VKCVV{I|L}{I|L};{[VA]|[{I|L}G]}{[SA]|[TG]}{I|L}MAV{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DVVAV{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}{[QS]|[NT]}AV{I|L}{I|L};[DV]VKM{I|L}G{I|L}{I|L};{[VA]|[{I|L}G]}{[SA]|[TG]}{I|L}CVV{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DVAVV{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DV{I|L}GV{I|L}{I|L};{[MG]|[TS]}WVVAV{I|L}{I|L} 3.7525;3.574;3.3991;3.3706;3.2724;3.2689;3.2206;3.1922;3.0655;3.0655 -;-;-;-;-;-;-;-;-;- 1949 1 0.995 73295.4 1.0 11376 5690 17052 HBL1_DMSO_200M_050219_1,17068 HBL1_DMSO_200M_050219_1,17068,IGYRPGVLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17069 82.122 132.0 1359000.0 25 0 144580.0 + -1 LAEMEMSL 8 172 478.2091679885692 954.4037830439383 2 478.2085143923759 MULTI CID FTMS 0 0 0 17052 346216.46875 0.1667426462682331 4 -0.35662841796875 17 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 14.581692164780916 0.6954967302934248 3 {I|L}SSKV 5 -1 18.703 0.0 0.0 1.9597 0.0 0.0 0.0 437.0826802812568 437.0826802812568 0.0065959221457099 0.0 0.0 0.0 0 0.0 0.721246399047171 0.0 0.0 {I|L}SSKV 1.9597 - 582 + 1 0.995 138962.6 1.0 11377 5690 17052 HBL1_DMSO_200M_050219_1,17069 HBL1_DMSO_200M_050219_1,17069,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17070 82.129 347.0 318180.0 25 0 49394.0 39605 VDKRKPPWVI 10 145 619.372037755788 1236.729522578376 2 619.3732177615166 MULTI CID FTMS 0 0 0 17052 317547.21875 0.3132962005103379 6 -0.519622802734375 18 Unmodified _VDKRKPPWVI_ ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-2|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A 6.723162845929126 0.6955379296933136 3 [WP]YYV{M(Oxidation (M))|F}WP 8 9 14.614 0.0 0.0 1.1817 0.0 0.0 0.0 95.17343161134424 95.17343161134424 3.0102999566398108 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [WP]YYV{M(Oxidation (M))|F}WP 1.1817 - 295 1 0.995 80968.9 1.0 11378 5690 17052 HBL1_DMSO_200M_050219_1,17070 HBL1_DMSO_200M_050219_1,17070,VDKRKPPWVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17071 82.136 338.0 253230.0 25 0 18139.0 -1 0 128 647.3757613475314 646.3684848809313 1 648.3737060427666 MULTI CID FTMS 0 0 0 17052 299782.25 0.1426679874627485 14 -1.1450958251953125 19 3 {I|L} 1 -1 12.218 0.0 0.0 1.8903 0.0 0.0 515.2734664256564 0.0 515.2734664256564 0.0 1.6225554575675185 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.8903 - 134 + 1 0.995 69630.5 1.0 11379 5690 17052 HBL1_DMSO_200M_050219_1,17071 HBL1_DMSO_200M_050219_1,17071, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17072 82.139 171.0 156300.0 25 0 18654.0 + -1 MLCSGPPFL 9 63 490.7324659451882 979.4503789571764 2 490.7319518923759 MULTI CID FTMS 0 0 0 17052 236779.65625 0.1963187740878823 -6 0.4802780151367187 20 Oxidation (M) _M(Oxidation (M))LCSGPPFL_ REV__ENST00000375893.6_1_6:31632636-31633398:-|nuORF;REV__ENST00000375895.6_1_6:31632636-31633491:-|nuORF 8.593279151180031 0.6146971463335029 3 [{I|L}T]C{I|L}V 5 -1 32.447 0.0 0.0 3.3128 0.0 0.0 0.0 447.1369383656327 447.1369383656327 18.46787486224656 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}T]C{I|L}V 3.3128 - 78 1 0.995 27361.4 1.0 11380 5690 17052 HBL1_DMSO_200M_050219_1,17072 HBL1_DMSO_200M_050219_1,17072,MLCSGPPFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17074 82.147 241.0 1467300.0 25 0 230570.0 + 35736 SVIDHIHLI 9 159 349.53820907982254 1045.5927978396676 3 349.5378906130791 MULTI CID FTMS 0 0 0 17073 1395412.375 0.9576975484611748 2 -0.1368255615234375 1 Unmodified _SVIDHIHLI_ ENSG00000123159|ENST00000393033|GIPC1;nc|ENSG00000123159|O14908-2|GIPC1 70.71552829651908 0.0208223590022201 3 [VS]{I|L}DH{I|L}H{I|L}{I|L} 9 0 + 76.684 0.0 0.0 7.334 7.334 87.667 0.0 0.0 0.0 23.256886463274284 11.760912590556812 11.760912590556812 5.242275032520141 0 1.0387254899964358 2.0 0.8494850021680094 0.0 + + [VS]{I|L}DH{I|L}H{I|L}{I|L};[VS]{I|L}{I|L}DHH{I|L}{I|L};[VS]{I|L}D{I|L}HH{I|L}{I|L};[VS]{I|L}DH{I|L}{I|L}H{I|L};[VS]{I|L}DH{I|L}{I|L}{I|L}H;[VS]{I|L}{I|L}DH{I|L}H{I|L};[VS]{I|L}D{I|L}H{I|L}H{I|L};[VS]{I|L}{I|L}DH{I|L}{I|L}H;[VS]{I|L}D{I|L}H{I|L}{I|L}H;[HD]{I|L}H{I|L}{I|L}{I|L}[VS] 7.334;6.8326;6.735;6.6655;6.2092;6.1642;6.0665;5.7078;5.6102;4.5064 +;-;-;-;-;-;-;-;-;- + 1055 + 1 0.983 290991.9 1.0 11381 5691 17073 HBL1_DMSO_200M_050219_1,17074 HBL1_DMSO_200M_050219_1,17074,SVIDHIHLI True True SVIDHIHLI 82.146542 349.537890613079 195619403.0 17073.0 ENSG00000123159|ENST00000393033|GIPC1;;nc|ENSG00000123159|O14908-2|GIPC1 4.495838801066081 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17075 82.151 262.0 637930.0 25 0 102800.0 13416 HLLRFHLLCIS 11 147 676.3875710052235 1350.760589077247 2 676.3880493044853 MULTI CID FTMS 0 0 0 17073 659959.875 0.961631309996328 2 -0.1368255615234375 2 Unmodified _HLLRFHLLCIS_ ENST00000498873.5_1_4:120419020-120434055:+|nuORF 5.731851221503515 0.8481046878870278 3 {I|L} 1 10 9.6041 0.0 0.0 0.71101 0.0 0.0 1219.6652654461907 0.0 1219.6652654461907 0.0 8.634993639681312 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.71101 + + 83 + 1 0.983 134428.6 1.0 11382 5691 17073 HBL1_DMSO_200M_050219_1,17075 HBL1_DMSO_200M_050219_1,17075,HLLRFHLLCIS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17076 82.153 12.0 4504600.0 25 0 574290.0 + 18940 LDAICYYY 8 80 512.2280951235653 1022.4416373139304 2 512.2283203005791 MULTI CID FTMS 0 0 0 17073 2932248.0 0.9822247267057698 -1 0.072784423828125 3 Unmodified _LDAICYYY_ ENSG00000178623|ENST00000407714|GPR35;nc|ENSG00000178623|Q9HC97-2|GPR35 13.50788311687929 0.7113601687236069 3 {NN|[MP]|[D{I|L}]|[EV]}AP{I|L}Y 6 4 30.635 0.0 0.0 2.9962 0.0 0.0 0.0 347.06685639035544 347.06685639035544 7.413077826315408 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}AP{I|L}Y 2.9962 - 214 1 0.983 45414.8 1.0 11383 5691 17073 HBL1_DMSO_200M_050219_1,17076 HBL1_DMSO_200M_050219_1,17076,LDAICYYY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17077 82.154 27.0 1511000.0 25 0 290960.0 5724 DPLPNLKIKV 10 62 568.8536832095962 1135.6928134859922 2 568.8535644412041 MULTI CID FTMS 0 0 0 17073 1635085.375 0.6552254153276071 -1 0.072784423828125 4 Unmodified _DPLPNLKIKV_ ENSG00000182168|ENST00000453304|UNC5C;nc|ENSG00000182168|O95185-2|UNC5C 1.4819007175156935 0.719781833666733 3 [DP]{I|L}Y 4 7 10.177 0.0 0.0 0.89613 0.0 0.0 0.0 644.4430020448391 644.4430020448391 0.0886438348021556 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [DP]{I|L}Y 0.89613 - 20 1 0.983 39572.2 1.0 11384 5691 17073 HBL1_DMSO_200M_050219_1,17077 HBL1_DMSO_200M_050219_1,17077,DPLPNLKIKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17078 82.155 50.0 2303100.0 25 0 115340.0 -1 0 118 887.4154079660382 1772.8162629988765 2 887.9159423708916 MULTI CID FTMS 0 0 0 17073 1457786.625 0.8389353026069069 -1 0.072784423828125 5 3 VSV{I|L}VE[QP] 8 -1 45.016 0.0 0.0 2.5393 0.0 0.0 903.326163977195 0.0 903.326163977195 0.0 4.490604635087294 0.0 0.0 0 0.0 0.0 1.5911290632962718 0.0 VSV{I|L}VE[QP] 2.5393 - 2241 + 1 0.983 82249.0 1.0 11385 5691 17073 HBL1_DMSO_200M_050219_1,17078 HBL1_DMSO_200M_050219_1,17078, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17079 82.161 337.0 784900.0 25 0 194690.0 -1 DALLPILL 8 134 303.86064273765334 908.56009881316 3 303.8603698611259 MULTI CID FTMS 0 0 0 17073 576149.0 1.0 0 0.0 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))DALLPILL_ ENST00000356731.9_1_5:179051529-179051574:-|nuORF 0.7936320650641473 0.8195151834710337 3 {I|L} 1 -1 13.979 0.0 0.0 1.5386 0.0 0.0 777.4650193227288 0.0 777.4650193227288 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5386 + + 55 + 1 0.983 214413.2 1.0 11386 5691 17073 HBL1_DMSO_200M_050219_1,17079 HBL1_DMSO_200M_050219_1,17079,DALLPILL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17080 82.163 77.0 889160.0 25 0 54359.0 23671 LTSDKMCSMV 10 114 557.7483692469219 1113.4821855606438 2 557.7487670779228 MULTI CID FTMS 0 0 0 17073 556679.9375 0.522151801152138 -1 0.072784423828125 7 Unmodified _LTSDKMCSMV_ ENST00000389400.4_1_10:86320393-86320726:+|nuORF 19.256988751693697 0.5244284437930726 3 {[QV]|[N{I|L}]|[RA]|[KV]}E{M(Oxidation (M))|F}[{I|L}T]WP 8 8 31.648 0.0 0.0 2.8423 0.0 0.0 0.0 109.95321867404884 109.95321867404884 3.857828494520703 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}E{M(Oxidation (M))|F}[{I|L}T]WP 2.8423 - 800 1 0.983 56908.7 1.0 11387 5691 17073 HBL1_DMSO_200M_050219_1,17080 HBL1_DMSO_200M_050219_1,17080,LTSDKMCSMV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17081 82.168 247.0 238810.0 25 0 21987.0 29186 QGDKMPPF 8 97 919.4326176398174 918.4253411732174 1 919.9229614138604 MULTI CID FTMS 0 0 0 17073 275005.625 0.216560623036106 8 -0.63470458984375 8 Unmodified _QGDKMPPF_ ENSG00000124827|ENST00000379491|GCM2 18.13498045792455 0.6430038125133779 3 [EP]{M(Oxidation (M))|F}WR{[QG]|[NA]} 7 8 + 28.804 0.0 0.0 3.1362 3.1362 75.71 0.0 0.0 0.0 6.508567774460978 4.392200779062492 4.392200779062492 6.00833760139686 0 0.5 0.958607314841775 0.805462187404089 0.0 [EP]{M(Oxidation (M))|F}WR{[QG]|[NA]};[EP]W{M(Oxidation (M))|F}R{[QG]|[NA]};[PG]GGSG{M(Oxidation (M))|F}R{[QG]|[NA]};[EP]{M(Oxidation (M))|F}W[VG]{[QG]|[NA]};[NP]GSG{M(Oxidation (M))|F}R{[QG]|[NA]};[PG]NSG{M(Oxidation (M))|F}R{[QG]|[NA]};[PG]SNG{M(Oxidation (M))|F}R{[QG]|[NA]};[EP]W{M(Oxidation (M))|F}[VG]{[QG]|[NA]};[PG]GGSG{M(Oxidation (M))|F}[VG]{[QG]|[NA]};[PG]G[NS]{M(Oxidation (M))|F}R{[QG]|[NA]} 3.1362;2.482;2.4276;2.1203;2.0805;2.0441;2.0441;1.4661;1.4297;1.4191 -;-;-;-;-;-;-;-;-;- 629 1 0.983 40667.8 1.0 11388 5691 17073 HBL1_DMSO_200M_050219_1,17081 HBL1_DMSO_200M_050219_1,17081,QGDKMPPF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17082 82.175 435.0 1106100.0 25 0 201110.0 24610 MLLHKIPLI 9 218 359.8990486929945 1076.6753166791834 3 359.8987304568291 MULTI CID FTMS 0 0 0 17073 335872.25 0.5988014290679134 -1 0.072784423828125 9 Unmodified _MLLHKIPLI_ ENSG00000196860|ENST00000360945|TOMM20L 23.1484247019978 0.2366544122328345 3 {[TV]|[{I|L}S]}MPAS{I|L} 7 7 49.136 0.0 0.0 4.5637 0.0 0.0 0.0 374.2931266644602 374.2931266644602 30.98285613230528 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.5614129160722452 0.0 {[TV]|[{I|L}S]}MPAS{I|L} 4.5637 - 1233 1 0.983 380966.4 1.0 11389 5691 17073 HBL1_DMSO_200M_050219_1,17082 HBL1_DMSO_200M_050219_1,17082,MLLHKIPLI False True KPHIIPFIL 82.175361 359.898730456829 6027487.5 17073.0 nc|ENSG00000183010|P32322-2|PYCR1;;ENSG00000183010|ENST00000329875|PYCR1;;ENST00000478402.5_1_1:226109873-226110089:-|nuORF;;ENSG00000143811|ENST00000343818|PYCR2;;nc|ENSG00000183010|P32322-3|PYCR1 1.0709930062294006 3.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17083 82.178 114.0 567210.0 25 0 61397.0 + + 13874 HVVERLFEI 9 86 571.3222857271653 1140.6300185211303 2 571.3203613162041 MULTI CID FTMS 0 0 0 17073 387295.84375 1.0 0 0.0 10 Unmodified _HVLQEKAFVA_ ENSG00000277462|ENST00000366503|ZNF670 20.41453444215458 0.5050059513928961 3 HV{I|L} 3 -1 52.435 0.0 0.0 4.597 0.0 0.0 0.0 788.3944726107054 788.3944726107054 31.46591250700361 0.0 0.0 0.0 0 0.6237125054200234 2.0 0.0 0.0 HV{I|L} 4.597 + + 34 + 1 0.983 52598.2 1.0 11390 5691 17073 HBL1_DMSO_200M_050219_1,17083 HBL1_DMSO_200M_050219_1,17083,HVLQEKAFVA False False HVVERLFEI 82.177759 571.320361316204 4548143.0 17073.0 ENSG00000277462|ENST00000366503|ZNF670 3.2831419308980307 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17084 82.184 342.0 333020.0 25 0 28743.0 + 9304 FIFSDTHEL 9 145 554.7693373998666 1107.524121866533 2 554.7701293826103 MULTI CID FTMS 0 0 0 17073 314984.59375 0.1576222958635134 5 -0.44683837890625 11 Unmodified _FIFSDTHEL_ ENSG00000102699|ENST00000381989|PARP4 26.88365393820708 0.1891292719743517 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y 3 7 22.051 0.0 0.0 1.9911 0.0 0.0 0.0 697.3828219049436 697.3828219049436 2.936368969388422 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y 1.9911 - 596 + 1 0.983 92183.6 1.0 11391 5691 17073 HBL1_DMSO_200M_050219_1,17084 HBL1_DMSO_200M_050219_1,17084,FIFSDTHEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17085 82.192 433.0 492740.0 25 0 66651.0 + 28895 QAPLVLQV 8 171 434.26844989969663 0 434.2682983279228 PEAK CID FTMS 0 0 0 17073 312382.75 0.7949275402080136 -1 0.072784423828125 12 Unmodified _QAPLVLQV_ ENSG00000165417|ENST00000553612|GTF2A1;ENST00000298173.7_1_14:81646569-81676264:-|nuORF;nc|ENSG00000165417|P52655-2|GTF2A1 44.40701690623563 0.1214779822192256 3 {I|L}QAV 4 6 16.101 0.0 0.0 1.8581 0.0 0.0 245.13454276638703 207.114557134436 452.249099900823 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.3807196863200844 {I|L}QAV 1.8581 - 129 + 1 0.983 166011.9 1.0 11392 5691 17073 HBL1_DMSO_200M_050219_1,17085 HBL1_DMSO_200M_050219_1,17085,QAPLVLQV True True QAPLVLQV 82.191651 434.268298327923 3196027.75 17073.0 ENST00000298173.7_1_14:81646569-81676264:-|nuORF;;nc|ENSG00000165417|P52655-2|GTF2A1;;ENSG00000165417|ENST00000553612|GTF2A1 6.264382203420003 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17086 82.198 354.0 299090.0 25 0 20501.0 + 29546 QLPELFHKI 9 147 562.8267392176907 1123.638925502181 2 562.8271972537041 MULTI CID FTMS 0 0 0 17073 272870.0 0.6518918236918344 5 -0.44683837890625 13 Unmodified _QLPELFHKI_ ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-5|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2 27.628801355627647 0.1796483985696185 3 [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}HK{I|L} 9 0 + 52.73 0.0 0.0 4.6928 4.6928 80.755 0.0 0.0 0.0 39.23545499301908 12.007499097191284 12.007499097191284 6.7609125905568135 0 0.2887254899964357 2.0 0.0 0.0 + + [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}HK{I|L};[Q{I|L}]{I|L}[EP]{M(Oxidation (M))|F}HK{I|L};{[QN]|[E{I|L}]|[KN]}PQ{I|L}{M(Oxidation (M))|F}HK{I|L};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}EEHK{I|L};[Q{I|L}]M[HK]{I|L}{I|L}{[QN]|[E{I|L}]|[KN]};[Q{I|L}]M[HK][K{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[PS]P{I|L} 4.6928;4.0911;2.1023;1.2361;1.1572;0.88933;0.015972 +;-;-;-;-;-;- + 423 + 1 0.983 82746.5 1.0 11393 5691 17073 HBL1_DMSO_200M_050219_1,17086 HBL1_DMSO_200M_050219_1,17086,QLPELFHKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17087 82.205 335.0 145680.0 25 0 62601.0 -1 0 33 1180.588427722454 0 1180.588427722454 PEAK CID FTMS 0 0 0 -1 0 14 3 M 1 -1 6.9897 0.0 0.0 0.29628 0.0 0.0 1527.800133177527 697.29659024301 2225.096723420537 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.29628 - 4 + 1 0.983 37561.4 1.0 11394 5691 17073 HBL1_DMSO_200M_050219_1,17087 HBL1_DMSO_200M_050219_1,17087, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17088 82.212 358.0 411210.0 25 0 19885.0 + 30012 QTLDPKLILQA 11 175 620.369489614956 1238.724426296712 2 620.3711425662041 MULTI CID FTMS 0 0 0 17073 240006.703125 1.0 0 0.0 15 Unmodified _QTLDPKLILQA_ ENSG00000000460|ENST00000359326|C1orf112;ENST00000498289.5_1_1:169773308-169819597:+|nuORF;nc|ENSG00000000460|Q9NSG2-2|FIRRM;nc|ENSG00000000460|Q9NSG2-3|FIRRM 12.240655878213236 0.7805268987462184 3 [PS]{M(Oxidation (M))|F}AS{I|L} 6 9 43.58 0.0 0.0 3.5181 0.0 0.0 0.0 633.3942010371994 633.3942010371994 22.266376297753617 0.0 0.0 0.0 0 0.0 0.744727494896694 1.3737125054200234 0.0 [PS]{M(Oxidation (M))|F}AS{I|L} 3.5181 - 2121 1 0.983 110100.4 1.0 11395 5691 17073 HBL1_DMSO_200M_050219_1,17088 HBL1_DMSO_200M_050219_1,17088,QTLDPKLILQA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17089 82.218 323.0 311200.0 25 0 24499.0 -1 0 108 1035.9521352446072 0 1035.827197253704 PEAK CID FTMS 0 0 0 -1 0 16 3 {I|L}ENY[QP]ME{I|L}QE{I|L} 12 -1 51.007 0.0 0.0 2.4642 0.0 0.0 291.1132662469059 288.09959643543203 579.2128626823379 0.0 0.0 0.0 0.0 0 0.0 0.0 1.16944517631652 1.2302046884880935 {I|L}ENY[QP]ME{I|L}QE{I|L} 2.4642 - 6220 + 1 0.983 71431.4 1.0 11396 5691 17073 HBL1_DMSO_200M_050219_1,17089 HBL1_DMSO_200M_050219_1,17089, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17090 82.225 403.0 579690.0 25 0 71969.0 + 27163 PFSSYGFSL 9 223 502.7393672159088 1003.4641814986176 2 502.7382385134697 MULTI CID FTMS 0 0 0 17073 197283.21875 0.7207805359913996 -1 0.072784423828125 17 Unmodified _PFSSYGFSL_ REV__ENST00000540837.1_12:9098881-9102125:-|nuORF;REV__ENST00000543845.1_12:9099387-9102125:-|nuORF;REV__ENST00000544245.1_12:9098881-9102125:-|nuORF 23.1484247019978 0.2366544122328345 3 {[QG]|[NA]}EANM 6 -1 21.718 0.0 0.0 2.1643 0.0 0.0 0.0 370.195329873017 370.195329873017 -1.7631991957379398 0.0 -1.7631991957379398 0.0 0 0.3252574989159953 0.7958800173440752 0.0 0.6976212463643423 {[QG]|[NA]}EANM 2.1643 - 1651 1 0.983 173705.7 1.0 11397 5691 17073 HBL1_DMSO_200M_050219_1,17090 HBL1_DMSO_200M_050219_1,17090,PFSSYGFSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17092 82.229 0.93 48903000.0 25 0 10758000.0 + 15563 IPYHIVNIV 9 65 534.3160850614504 1066.6176171897007 2 534.3157836794853 MULTI CID FTMS 0 0 0 17091 57881292.0 1.0 0 0.0 1 Unmodified _IPYHIVNIV_ ENSG00000031698|ENST00000234677|SARS1 40.44857923139169 0.0729940656229577 3 {[QV]|[N{I|L}]|[RA]|[KV]}[WP]VN{I|L}{I|L}V 9 5 + 62.598 0.0 0.0 5.8688 5.8688 58.649 0.0 0.0 0.0 9.030899869919438 16.478174818886373 9.030899869919438 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[WP]VN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}VN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]V{I|L}N{I|L}V;[{I|L}P]{[WN]|[YH]}VN{I|L}{I|L}V;[{I|L}P]{[WN]|[YH]}{I|L}VN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]VGG{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}VGG{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}VN{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}VN{I|L}{I|L}V;[{I|L}P]{[WN]|[YH]}V{I|L}N{I|L}V 5.8688;5.8688;5.5866;5.0221;5.0221;5.0055;5.0055;4.9792;4.9792;4.7399 -;-;-;-;+;-;-;-;-;- + 277 1 0.983 41392.2 1.0 11398 5692 17091 HBL1_DMSO_200M_050219_1,17092 HBL1_DMSO_200M_050219_1,17092,IPYHIVNIV True True IPYHIVNIV 82.229038 534.315783679485 3751116480.0 17091.0 ENSG00000031698|ENST00000234677|SARS1 7.716764767964681 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17093 82.23 4.1 17285000.0 25 0 2915500.0 + 9898 FPFYGKPMRI 10 61 419.2266611861339 1254.6581541586015 3 419.2267944216728 MULTI CID FTMS 0 0 0 17091 12172512.0 1.0 0 0.0 2 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 27.628801355627647 0.3479284626772844 3 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 61.592 0.0 0.0 4.909 0.0 0.0 119.07407576728671 0.0 119.07407576728671 0.0 39.373212897245295 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 4.909 - 233 1 0.983 60924.9 1.0 11399 5692 17091 HBL1_DMSO_200M_050219_1,17093 HBL1_DMSO_200M_050219_1,17093,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17094 82.231 11.0 4640100.0 25 0 495900.0 + 22529 LPWGDPSQI 9 73 506.7588853228567 1011.5032177125132 2 506.7588378787041 MULTI CID FTMS 0 0 0 17091 3831082.0 1.0 0 0.0 3 Unmodified _LPWGDPSQI_ ENSG00000134758|ENST00000261593|RNF138;ENST00000502765.1_1_5:54825986-54826487:-|nuORF;nc|ENSG00000134758|Q8WVD3-2|RNF138 38.15118350030904 0.0856056900103839 3 [WP]{I|L}[DG]PS[Q{I|L}] 9 2 + 28.579 0.0 0.0 2.8254 2.8254 49.849 0.0 0.0 0.0 1.638568026386693 3.6527926935124135 1.638568026386693 0.0 0 0.0 1.0969100130080565 0.9247425010840048 0.0 [WP]{I|L}[DG]PS[Q{I|L}];[WP][DG]{I|L}PS[Q{I|L}];[{I|L}P]W[DG]PS[Q{I|L}];[AG]SPQQPS[Q{I|L}];[PS]QQQPS[Q{I|L}];{[QN]|[E{I|L}]|[KN]}YYPS[Q{I|L}];{[QS]|[NT]}PQQPS[Q{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SP{[RE]|[WV]}[HQ];[VP]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PS[Q{I|L}];[PS][AG]QQPS[Q{I|L}] 2.8254;2.8254;2.6634;2.3463;1.6262;1.2746;1.2619;1.1005;0.78195;0.71586 -;-;+;-;-;-;-;-;-;- + 171 1 0.983 46054.7 1.0 11400 5692 17091 HBL1_DMSO_200M_050219_1,17094 HBL1_DMSO_200M_050219_1,17094,LPWGDPSQI True True LPWGDPSQI 82.231396 506.758837878704 40286976.0 17091.0 nc|ENSG00000134758|Q8WVD3-2|RNF138;;ENSG00000134758|ENST00000261593|RNF138;;ENST00000502765.1_1_5:54825986-54826487:-|nuORF -0.1107616126537323 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17095 82.233 19.0 2181400.0 25 0 119300.0 -1 0 67 881.4140406640831 1760.8135283949662 2 881.9160034060478 MULTI CID FTMS 0 0 0 17091 3090677.75 0.0782010632708769 6 -0.4839935302734375 4 3 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 12 -1 62.846 0.0 0.0 3.5692 0.0 0.0 358.2249969551761 0.0 358.2249969551761 0.0 52.38859729996989 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 3.5692 - 892 + 1 0.983 33379.5 1.0 11401 5692 17091 HBL1_DMSO_200M_050219_1,17095 HBL1_DMSO_200M_050219_1,17095, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17096 82.234 24.0 2509900.0 25 0 464520.0 + 1701 ALPLSEGTH 9 67 462.7438414389623 923.4731299447244 2 462.7439147830009 MULTI CID FTMS 0 0 0 17091 3062280.0 0.6438452591503029 6 -0.4839935302734375 5 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 15.847184025352805 0.4077185912009129 3 [{I|L}A]P{I|L} 4 -1 38.94 0.0 0.0 4.2167 0.0 0.0 0.0 526.1894625299436 526.1894625299436 27.52017933357808 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.2167 + + 12 + 1 0.983 54542.4 1.0 11402 5692 17091 HBL1_DMSO_200M_050219_1,17096 HBL1_DMSO_200M_050219_1,17096,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17097 82.235 18.0 2596300.0 25 0 272010.0 + 34962 SQLDVPFKV 9 75 516.7896978281069 1031.5648427230135 2 516.7904540896416 MULTI CID FTMS 0 0 0 17091 2082854.375 0.5607507033094278 1 -0.050750732421875 6 Unmodified _SQLDVPFKV_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 29.84058131909904 0.1515068451768857 3 {[QS]|[NT]}{I|L}DVP{M(Oxidation (M))|F}KV 9 0 + 48.494 0.0 0.0 4.701 4.701 85.858 0.0 0.0 0.0 20.79100265280318 9.465686059664344 9.465686059664344 16.72540926694865 0 0.8807196863200843 0.0 0.0 0.2396518287104437 + + {[QS]|[NT]}{I|L}DVP{M(Oxidation (M))|F}KV;{[QS]|[NT]}{I|L}DV[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.701;3.0797 +;- + 90 + 1 0.983 41531.6 1.0 11403 5692 17091 HBL1_DMSO_200M_050219_1,17097 HBL1_DMSO_200M_050219_1,17097,SQLDVPFKV False True SQLDVPFKV 82.234946 516.790454089642 27794634.0 17091.0 ENSG00000197969|ENST00000360280|VPS13A;;nc|ENSG00000197969|Q96RL7-2|VPS13A;;nc|ENSG00000197969|Q96RL7-4|VPS13A;;nc|ENSG00000197969|Q96RL7-3|VPS13A 7.152461846669515 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17098 82.236 27.0 2609900.0 25 0 224810.0 + 41231 VPFSVPKI 8 82 443.7726483262453 885.5307437192906 2 443.7734863162041 MULTI CID FTMS 0 0 0 17091 2137847.25 0.6640048924941043 -3 0.2392959594726562 7 Unmodified _VPFSVPKI_ ENSG00000068079|ENST00000415816|IFI35;ENST00000246911.6_1_17:41158964-41165399:+|nuORF;nc|ENSG00000068079|P80217-2|IFI35 68.08070601005525 0.1147890174299629 3 VP{M(Oxidation (M))|F}SVPK{I|L} 8 0 + 74.466 0.0 0.0 8.4092 8.4092 95.08 0.0 0.0 0.0 28.31592122822613 11.268732363854994 11.268732363854994 11.268732363854994 0 1.0356668758921828 1.5228787452803376 0.4247425010840047 0.0 + + VP{M(Oxidation (M))|F}SVPK{I|L};VP{M(Oxidation (M))|F}SV{I|L}[KP];V{I|L}MSVPK{I|L};V{I|L}MSV{I|L}[KP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV[KP]{I|L}V;[KP][RH]H{I|L}V;V{I|L}[R{M(Oxidation (M))|F}][RP]V;[TA]VV{[RE]|[WV]}{I|L}V 8.4092;7.1367;7.0647;5.7922;4.5091;1.5795;1.5207;0.42882 +;-;-;-;-;-;-;- + 225 + 1 0.983 60203.8 1.0 11404 5692 17091 HBL1_DMSO_200M_050219_1,17098 HBL1_DMSO_200M_050219_1,17098,VPFSVPKI True True VPFSVPKI 82.236123 443.773486316204 99797712.0 17091.0 ENSG00000068079|ENST00000415816|IFI35;;nc|ENSG00000068079|P80217-2|IFI35;;ENST00000246911.6_1_17:41158964-41165399:+|nuORF 4.895710150400798 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17099 82.237 30.0 2765400.0 25 0 1330600.0 14052 IALEHGADV 9 50 924.4800894928544 923.4728130262544 1 924.4807006716728 MULTI CID FTMS 0 0 0 17091 1928067.875 0.1643702144205574 6 -0.4839935302734375 8 Unmodified _IALEHGADV_ ENSG00000132623|ENST00000378392|ANKEF1 28.486842064014134 0.1687311288560894 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}A{I|L}{M(Oxidation (M))|F}TV 8 7 + 42.6 0.0 0.0 4.613 4.613 54.376 0.0 0.0 0.0 4.463950151760656 25.108441128437704 4.463950151760656 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}A{I|L}{M(Oxidation (M))|F}TV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}A{M(Oxidation (M))|F}{I|L}TV;[{I|L}A][CS]A{M(Oxidation (M))|F}{I|L}TV;[{I|L}A][CS]A{I|L}{M(Oxidation (M))|F}TV;[{I|L}A]{M(Oxidation (M))|F}N{I|L}{M(Oxidation (M))|F}TV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}TVVVV;[{I|L}A]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}{I|L}TV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AYVVV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}[{I|L}A]{I|L}TV;[{I|L}A][CS]AYVVV 4.613;4.613;3.6348;3.6348;3.6039;3.3565;3.2593;3.0438;2.9086;2.0657 -;-;-;-;-;-;-;-;-;- 186 1 0.983 62097.1 1.0 11405 5692 17091 HBL1_DMSO_200M_050219_1,17099 HBL1_DMSO_200M_050219_1,17099,IALEHGADV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17100 82.238 31.0 1747900.0 25 0 444780.0 + 27164 PFTKMEPQI 9 75 545.7822580914914 0 545.7819091677666 PEAK CID FTMS 0 0 0 17091 1726182.625 0.8924549777342857 1 -0.050750732421875 9 Unmodified _PFTKMEPQI_ REV__ENSG00000178386|ENST00000434772|ZNF223 16.942295170755138 0.2326366549411506 3 {M(Oxidation (M))|F}{M(Oxidation (M))|F}TPS 5 -1 26.432 0.0 0.0 2.4259 0.0 0.0 356.20637718446625 151.05158411197502 507.2579612964413 0.0 0.0 0.0 0.0 0 0.0 0.0 1.5629529932484498 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F}TPS 2.4259 - 216 + 1 0.983 52124.8 1.0 11406 5692 17091 HBL1_DMSO_200M_050219_1,17100 HBL1_DMSO_200M_050219_1,17100,PFTKMEPQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17101 82.24 42.0 1796800.0 25 0 300750.0 -1 LACVDTYV 8 81 470.7265013201815 939.438449707163 2 470.7265502810478 MULTI CID FTMS 0 0 0 17091 1706873.875 0.4231423604300183 6 -0.4839935302734375 10 Carbamidomethyl (C) _LAC(Carbamidomethyl (C))VDTYV_ ENSG00000165762|ENST00000641885|OR4K2 19.438996006549623 0.6237395211498085 3 {I|L}A 2 -1 43.711 0.0 0.0 4.6529 0.0 0.0 0.0 752.2938333131752 752.2938333131752 18.64970648723208 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}A 4.6529 + + 40 + 1 0.983 64934.2 1.0 11407 5692 17091 HBL1_DMSO_200M_050219_1,17101 HBL1_DMSO_200M_050219_1,17101,LACVDTYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17102 82.241 32.0 808910.0 25 0 86329.0 -1 0 50 690.9726739414068 2069.8961924244204 3 691.3074218630791 MULTI CID FTMS 0 0 0 17091 1660194.0 1.0 0 0.0 11 3 [YQ]{I|L} 3 -1 13.2 0.0 0.0 0.63771 0.0 0.0 0.0 1662.6649661883455 1662.6649661883455 -0.823198202617986 0.0 -0.823198202617986 0.0 0 0.0 0.0 0.0 0.4247425010840047 [YQ]{I|L} 0.63771 - 41 1 0.983 34393.5 1.0 11408 5692 17091 HBL1_DMSO_200M_050219_1,17102 HBL1_DMSO_200M_050219_1,17102, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17103 82.242 58.0 978190.0 25 0 152500.0 + 15284 LPILVQHI 8 95 466.60839680188815 1396.8033610058644 3 466.6080505251884 MULTI CID FTMS 0 0 0 17091 975475.375 0.9544458897524792 1 -0.050750732421875 12 Unmodified _IPILRRDHHIQ_ ENST00000574547.5_1_17:4442712-4447986:-|nuORF;ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 10.073929032068715 0.8255972128077141 3 [{I|L}P]WV{I|L}{I|L}P 7 8 40.934 0.0 0.0 2.9306 0.0 0.0 0.0 575.2780623525836 575.2780623525836 24.480844613864647 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P]WV{I|L}{I|L}P 2.9306 - 177 1 0.983 61834.5 1.0 11409 5692 17091 HBL1_DMSO_200M_050219_1,17103 HBL1_DMSO_200M_050219_1,17103,IPILRRDHHIQ False False LPILVQHI 82.242302 466.608050525188 13621189.0 17091.0 ENST00000574547.5_1_17:4442712-4447986:-|nuORF;;ENSG00000132382|ENST00000254718|MYBBP1A;;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 5.056392987569173 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17104 82.244 96.0 1205300.0 25 0 127130.0 + 8687 EVITKFINV 9 151 531.8131510810317 1061.6117492288631 2 531.8142578005791 MULTI CID FTMS 0 0 0 17091 965866.0 0.0880473136738763 6 -0.4839935302734375 13 Unmodified _EVITKFINV_ ENSG00000152689|ENST00000403687|RASGRP3;nc|ENSG00000152689|Q8IV61-2|RASGRP3 81.89019881105858 0.0170587746866453 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}TK 5 4 44.09 0.0 0.0 4.1531 0.0 0.0 0.0 488.2486971490844 488.2486971490844 18.4443660971311 0.0 0.0 0.0 0 0.6549471895720985 2.0 0.0 0.6549471895720984 + {NN|[MP]|[D{I|L}]|[EV]}{I|L}TK 4.1531 + + 1944 + 1 0.983 97159.1 1.0 11410 5692 17091 HBL1_DMSO_200M_050219_1,17104 HBL1_DMSO_200M_050219_1,17104,EVITKFINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17105 82.246 68.0 1589400.0 25 0 128390.0 -1 MLFTVSCSKM 10 120 610.2798288899364 1218.5451048466728 2 610.2797119021416 MULTI CID FTMS 0 0 0 17091 962314.125 0.7838885490251023 -3 0.2392959594726562 14 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LFTVSC(Carbamidomethyl (C))SKM_ ENSG00000134852|ENST00000513440|CLOCK 24.020572477871973 0.4289996903560794 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TT[YG]EE{I|L} 10 -1 + 65.071 0.0 0.0 5.3401 5.3401 82.462 0.0 0.0 0.0 14.246199743006043 39.53758884495024 14.246199743006043 6.262874945799766 0 0.75 1.154901959985743 1.316901560044258 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TT[YG]EE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TT{[DA]|[EG]}YE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TT{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TT{[DA]|[EG]}EY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TT{[DS]|[MA]|[CV]|TT}E{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[VS][YG]EE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}[WD]{M(Oxidation (M))|F}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HV[W{M(Oxidation (M))|F}]EE{I|L} 5.3401;4.8261;4.4797;4.4299;4.3922;4.186;4.0448;3.918;3.8338;3.6066 -;-;-;-;-;-;-;-;-;- 2736 1 0.983 86273.2 1.0 11411 5692 17091 HBL1_DMSO_200M_050219_1,17105 HBL1_DMSO_200M_050219_1,17105,MLFTVSCSKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17106 82.248 99.0 1180900.0 25 0 127710.0 39428 VALWILVASL 10 149 542.8395132948835 1083.664473656567 2 543.3405639529228 MULTI CID FTMS 0 0 0 17091 761686.1875 0.1930242741232609 6 -0.4839935302734375 15 Unmodified _VALWILVASL_ ENSG00000135740|ENST00000299798|SLC9A5;ENST00000566638.1_1_16:67283046-67298355:+|nuORF 23.1484247019978 0.4485954791219598 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[K{I|L}]P{I|L}E[K{I|L}] 9 7 + 22.927 0.0 0.0 2.1157 2.1157 69.493 0.0 0.0 0.0 2.3408320603336783 3.1234684152074976 2.3408320603336783 2.3408320603336783 0 0.3807196863200844 1.2218487496163564 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[K{I|L}]P{I|L}E[K{I|L}];{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}E[K{I|L}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KP]{I|L}{I|L}E[K{I|L}];{[VA]|[{I|L}G]}[W{I|L}]{I|L}{I|L}E[K{I|L}];{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}{[VA]|[{I|L}G]}{I|L}E[K{I|L}];{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}T[R{I|L}];[KT][KQ]P{I|L}E[K{I|L}];[{I|L}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}E[K{I|L}];{I|L}{I|L}{[DA]|[EG]}{[VA]|[{I|L}G]}{I|L}T[R{I|L}];{NN|[MP]|[D{I|L}]|[EV]}KA[R{I|L}]Q[K{I|L}] 2.1157;1.8997;1.8379;1.5601;1.2412;1.1081;0.98389;0.82338;0.78917;0.6662 -;-;-;-;-;-;-;-;-;- 2251 1 0.983 97464.6 1.0 11412 5692 17091 HBL1_DMSO_200M_050219_1,17106 HBL1_DMSO_200M_050219_1,17106,VALWILVASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17107 82.252 223.0 1138800.0 25 0 83947.0 + 34612 SPLGSMPEI 9 112 930.4592345133 929.4519580467 1 930.4630004763604 MULTI CID FTMS 0 0 0 17091 736398.25 0.8286713193265904 -1 0.0860748291015625 16 Unmodified _SPLGSMPEI_ chr2:230221784-230225535|39|15.72|0.43|5.19|-|ENST00000540870|SP110,SP110;ENSG00000135899|ENST00000258381|SP110;ENST00000486146.2_1_2:231068050-231077551:-|nuORF;ENST00000490880.5_1_2:231065532-231076254:-|nuORF;nc|ENSG00000135899|Q9HB58-2|SP110;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110 115.6920309560759 0.0032017028976397 3 [PS]{I|L}GSM[EP]{I|L} 9 0 + 73.993 0.0 0.0 7.9609 7.9609 88.966 0.0 0.0 0.0 5.12234456417012 11.161968799114844 5.12234456417012 5.12234456417012 0 2.1861818737241734 1.154901959985743 1.9489700043360187 0.0 + + [PS]{I|L}GSM[EP]{I|L};[{I|L}P]SGSM[EP]{I|L};[EP]KSM[EP]{I|L};SP{I|L}GSM[EP]{I|L};[PS]{I|L}GMS[EP]{I|L};[PS]{I|L}G{[CP]|[EA]}P{M(Oxidation (M))|F}{I|L};[{I|L}P]GSSM[EP]{I|L};[TP]VGSM[EP]{I|L};[{I|L}P]SGMS[EP]{I|L};[{I|L}P]SG{[CP]|[EA]}P{M(Oxidation (M))|F}{I|L} 7.9609;7.4098;6.96;6.76;6.7306;6.6056;6.4958;6.2008;6.1795;6.0545 +;-;-;+;-;-;-;-;-;- + 2388 1 0.983 164842.9 1.0 11413 5692 17091 HBL1_DMSO_200M_050219_1,17107 HBL1_DMSO_200M_050219_1,17107,SPLGSMPEI True True SPLGSMPEI 82.252429 930.46300047636 10411165.0 17091.0 nc|ENSG00000135899|Q9HB58|SP110;;nc|ENSG00000135899|Q9HB58-5|SP110;;nc|ENSG00000135899|Q9HB58-7|SP110;;ENSG00000135899|ENST00000258381|SP110;;nc|ENSG00000135899|Q9HB58-2|SP110;;chr2:230221784-230225535|39|15.72|0.43|5.19|-|ENST00000540870|SP110,SP110;;ENST00000490880.5_1_2:231065532-231076254:-|nuORF;;nc|ENSG00000135899|Q9HB58-3|SP110;;ENST00000486146.2_1_2:231068050-231077551:-|nuORF 7.125055154164632 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17108 82.258 279.0 489760.0 25 0 22053.0 + 30661 RFPEELTQTF 10 148 634.3192064214766 1266.623859909753 2 634.3193237185478 MULTI CID FTMS 0 0 0 17091 506106.125 0.6189375980931914 -19 1.3335418701171875 17 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 40.72490554402381 0.149912226101682 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[TP]E{I|L}TQT{M(Oxidation (M))|F} 11 3 + 74.449 0.0 0.0 5.8778 5.8778 79.423 0.0 0.0 0.0 2.483076237217162 12.483076237217157 2.483076237217162 2.483076237217162 0 1.1643943297944483 1.0457574905606752 0.8494850021680094 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[TP]E{I|L}TQT{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{[VA]|[{I|L}G]}E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SAVE{I|L}EQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SAQQ{I|L}TQT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}M[TP]E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[RE]|[WV]}E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SE[TP]{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[TP]E{I|L}T[AG]T{M(Oxidation (M))|F};[PS]{M(Oxidation (M))|F}AQQ{I|L}TQT{M(Oxidation (M))|F} 5.8778;5.6817;5.6401;5.5776;5.5011;5.3818;5.3586;5.2634;5.1571;5.1329 -;-;-;-;-;-;-;-;-;- 8564 1 0.983 107663.2 1.0 11414 5692 17091 HBL1_DMSO_200M_050219_1,17108 HBL1_DMSO_200M_050219_1,17108,RFPEELTQTF False True RFPEELTQTF 82.257575 634.319323718548 160021776.0 17091.0 ENSG00000254772|ENST00000329251|EEF1G;;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;;nc|ENSG00000254772|P26641-2|EEF1G 7.540365854899089 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17109 82.263 294.0 586230.0 25 0 38161.0 + 13181 HGFAGYFETV 10 149 564.2611829272739 1126.5078129213475 2 564.2609130740166 MULTI CID FTMS 0 0 0 17091 463747.90625 0.1736247895199416 -3 0.2392959594726562 18 Unmodified _HGFAGYFETV_ ENSG00000100462|ENST00000324366|PRMT5;ENST00000557758.1_1_14:23391634-23392032:-|nuORF;nc|ENSG00000100462|O14744-2|PRMT5;nc|ENSG00000100462|O14744-3|PRMT5;nc|ENSG00000100462|O14744-4|PRMT5;nc|ENSG00000100462|O14744-5|PRMT5 70.71552829651908 0.0189135702660538 3 {NN|[MP]|[D{I|L}]|[EV]}[PS]GY{M(Oxidation (M))|F}ETV 10 4 + 73.254 0.0 0.0 6.5028 6.5028 88.101 0.0 0.0 0.0 1.0653741265442562 26.92032872686491 1.0653741265442562 8.57840941039747 0 0.5 1.6989700043360187 1.841129063296272 0.0 {NN|[MP]|[D{I|L}]|[EV]}[PS]GY{M(Oxidation (M))|F}ETV;{NN|[MP]|[D{I|L}]|[EV]}[PS]GYE{M(Oxidation (M))|F}TV;{[HG]|PP}{M(Oxidation (M))|F}AGY{M(Oxidation (M))|F}ETV;{NN|[MP]|[D{I|L}]|[EV]}[PS]GY{M(Oxidation (M))|F}TEV;{[HG]|PP}{M(Oxidation (M))|F}AGYE{M(Oxidation (M))|F}TV;[DP]VT{[ET]|[MV]}HETV;[DP]{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}ETV;{NN|[MP]|[D{I|L}]|[EV]}M{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}ETV;{[HG]|PP}{M(Oxidation (M))|F}QY{M(Oxidation (M))|F}ETV;[DP][WP]H{M(Oxidation (M))|F}ETV 6.5028;5.7413;5.6288;5.4537;5.2053;5.1509;5.0902;5.059;5.049;4.999 -;-;+;-;-;-;-;-;-;- + 3089 1 0.983 139035.8 1.0 11415 5692 17091 HBL1_DMSO_200M_050219_1,17109 HBL1_DMSO_200M_050219_1,17109,HGFAGYFETV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17110 82.268 274.0 540800.0 25 0 44994.0 + 33747 SLAGGIIGV 9 106 786.4721366883088 785.4648602217087 1 786.4747802615166 MULTI CID FTMS 0 0 0 17091 399367.21875 0.0140081889302793 11 -0.8599090576171875 19 Unmodified _SLAGGIIGV_ ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK 97.07464715276576 0.0121042244793311 3 {[QV]|[N{I|L}]|[RA]|[KV]}AS{I|L}{I|L}GV 8 3 + 77.574 0.0 0.0 9.8762 9.8762 88.305 0.0 0.0 0.0 3.064250275506879 14.904630595263413 3.064250275506879 3.064250275506879 0 0.6747425010840047 1.0969100130080565 1.774227503252014 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}AS{I|L}{I|L}GV;{[VA]|[{I|L}G]}GAS{I|L}{I|L}GV;{[TV]|[{I|L}S]}AN{I|L}{I|L}GV;{[TV]|[{I|L}S]}AGG{I|L}{I|L}GV;{[VA]|[{I|L}G]}QS{I|L}{I|L}GV;{[QV]|[N{I|L}]|[RA]|[KV]}AS{I|L}G{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}TG{I|L}{I|L}GV;{[VA]|[{I|L}G]}TN{I|L}{I|L}GV;{[VA]|[{I|L}G]}TGG{I|L}{I|L}GV;{[TV]|[{I|L}S]}QG{I|L}{I|L}GV 9.8762;9.4861;9.4447;9.3113;9.0446;8.9831;8.918;8.853;8.7195;8.6781 -;-;-;+;-;-;-;-;-;- + 1130 1 0.983 107647.1 1.0 11416 5692 17091 HBL1_DMSO_200M_050219_1,17110 HBL1_DMSO_200M_050219_1,17110,SLAGGIIGV True True SLAGGIIGV 82.268046 786.474780261517 239108208.0 17091.0 nc|ENSG00000165119|P61978-3|HNRNPK;;ENSG00000165119|ENST00000376263|HNRNPK;;nc|ENSG00000165119|P61978|HNRNPK;;ENST00000485383.1_1_3:96068520-96068997:+|nuORF 5.767778555552165 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17111 82.276 428.0 330180.0 25 0 28888.0 11585 GKPLKCIIKH 10 158 379.57125528976167 1135.691936469485 3 379.5711852908134 MULTI CID FTMS 0 0 0 17091 365324.15625 0.7998213629643212 1 -0.050750732421875 20 Unmodified _GKPLKCIIKH_ ENSG00000100412|ENST00000216254|ACO2 1.6526216038709556 0.7189921496796233 3 {I|L} 1 9 9.6041 0.0 0.0 0.84566 0.0 0.0 1004.596399215382 0.0 1004.596399215382 0.0 2.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.84566 + + 46 + 1 0.983 117427.2 1.0 11417 5692 17091 HBL1_DMSO_200M_050219_1,17111 HBL1_DMSO_200M_050219_1,17111,GKPLKCIIKH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17113 82.28 66.0 1386900.0 25 0 157350.0 + 25079 MPVQFQVV 8 103 474.254659092628 946.494765252056 2 474.2547485232353 MULTI CID FTMS 0 0 0 17112 986170.0 0.5638878108156595 1 -0.1470184326171875 1 Unmodified _MPVQFQVV_ ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC 26.34127834903884 0.4900704351052977 3 [{I|L}P]NM{M(Oxidation (M))|F}QVV 8 3 + 45.315 0.0 0.0 4.7877 4.7877 74.926 0.0 0.0 0.0 1.9382002601611248 9.330984399557424 1.9382002601611248 1.9382002601611248 0 0.6237125054200234 1.3979400086720375 0.0 0.3494850021680094 [{I|L}P]NM{M(Oxidation (M))|F}QVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NP]{M(Oxidation (M))|F}QVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}NMQVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}NQMVV;[VP]QM{M(Oxidation (M))|F}QVV;[{I|L}P]NM{M(Oxidation (M))|F}[AG]VV;NP{M(Oxidation (M))|F}{I|L}MQVV;[{I|L}P]N{M(Oxidation (M))|F}MQVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NP]{M(Oxidation (M))|F}[AG]VV;[VP]MQ{M(Oxidation (M))|F}QVV 4.7877;4.5829;4.2453;3.9273;3.8948;3.8091;3.8019;3.68;3.6044;3.5768 -;-;-;-;-;-;-;-;-;- 810 1 0.983 75933.5 1.0 11418 5693 17112 HBL1_DMSO_200M_050219_1,17113 HBL1_DMSO_200M_050219_1,17113,MPVQFQVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17114 82.282 105.0 912540.0 25 0 155530.0 + 18613 LAEQVSYM 8 83 314.15316800795216 0 314.1530639529228 PEAK CID FTMS 0 0 0 17112 236687.109375 0.0762554656552628 7 -0.5943145751953125 2 Unmodified _LAEQVSYM_ REV__ENSG00000135049|ENST00000357081|AGTPBP1;REV__nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;REV__nc|ENSG00000135049|Q9UPW5-3|AGTPBP1 19.438996006549623 0.4285751805470146 3 A 1 -1 6.9897 0.0 0.0 1.116 0.0 0.0 470.1650721225465 82.06701074771718 552.2320828702636 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.116 + + 7 + 1 0.983 83904.8 1.0 11419 5693 17112 HBL1_DMSO_200M_050219_1,17114 HBL1_DMSO_200M_050219_1,17114,LAEQVSYM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17115 82.287 259.0 422390.0 25 0 97095.0 + -1 QVQMPLVRRRV 11 113 699.4086727025749 1396.8027924719495 2 699.4080078005791 MULTI CID FTMS 0 0 0 17112 644681.9375 0.6428874377588907 1 -0.1470184326171875 3 Oxidation (M) _QVQM(Oxidation (M))PLVRRRV_ REV__ENSG00000149090|ENST00000619888|PAMR1;REV__nc|ENSG00000149090|Q6UXH9-2|PAMR1;REV__nc|ENSG00000149090|Q6UXH9-3|PAMR1 2.735195868890462 0.8622431031272658 3 {I|L}SA 3 -1 22.435 0.0 0.0 1.6062 0.0 0.0 697.4411724541748 425.18280969791255 1122.6239821520874 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 {I|L}SA 1.6062 - 292 + 1 0.983 97826.9 1.0 11420 5693 17112 HBL1_DMSO_200M_050219_1,17115 HBL1_DMSO_200M_050219_1,17115,QVQMPLVRRRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17116 82.292 271.0 401460.0 25 0 51108.0 + 44088 YIYDKDMEII 10 116 651.8178823417203 1301.6212117502405 2 651.8177978396416 MULTI CID FTMS 0 0 0 17112 591005.6875 0.1542274417951953 5 -0.4332427978515625 4 Unmodified _YIYDKDMEII_ ENSG00000124422|ENST00000261497|USP22;nc|ENSG00000124422|Q9UPT9-2|USP22 55.23464941255904 0.0494277333541689 3 [MD]EKDY{I|L}Y{I|L}{I|L} 10 7 + 82.834 0.0 0.0 6.3639 6.3639 84.082 0.0 0.0 0.0 4.605219929002018 16.53212513775344 4.605219929002018 4.605219929002018 0 0.7742275032520141 1.0 1.5986198691406326 0.0 [MD]EKDY{I|L}Y{I|L}{I|L};[{I|L}A]G{M(Oxidation (M))|F}DDY{I|L}Y{I|L}{I|L};[MD]EK{I|L}DYY{I|L}{I|L};[MD]EKD{I|L}YY{I|L}{I|L};[MD]EKDYY{I|L}{I|L}{I|L};[MD]EK{I|L}YDY{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}YDME{I|L}Y{I|L}{I|L};[MD]EKDY{I|L}{I|L}Y{I|L};[MD]EKEVYY{I|L}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}KDME{I|L}Y{I|L}{I|L} 6.3639;6.0101;5.7592;5.7288;5.6328;5.5888;5.5212;5.4603;5.4535;5.4252 -;-;-;-;-;-;-;-;-;- 2775 1 0.983 90289.5 1.0 11421 5693 17112 HBL1_DMSO_200M_050219_1,17116 HBL1_DMSO_200M_050219_1,17116,YIYDKDMEII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17117 82.297 277.0 699430.0 25 0 67254.0 + 12709 GVLSSDGVWRV 11 153 587.814718111146 0 587.8149902224541 PEAK CID FTMS 0 0 0 17112 540394.25 0.0536438339112052 -3 0.2096099853515625 5 Unmodified _GVLSSDGVWRV_ ENSG00000125459|ENST00000245564|MSTO1;ENST00000483734.5_1_1:155580745-155584061:+|nuORF;nc|ENSG00000125459|Q9BUK6-2|MSTO1;nc|ENSG00000125459|Q9BUK6-3|MSTO1 80.6760300276096 9.135227195593556e-06 3 {I|L}SSDVGW 7 6 65.75 0.0 0.0 5.6024 0.0 0.0 156.08935175520156 270.1577242486938 426.24707600389536 0.0 0.0 0.0 0.0 0 2.024227503252014 0.0 1.1307196863200843 0.0 {I|L}SSDVGW 5.6024 - 3655 + 1 0.983 145075.5 1.0 11422 5693 17112 HBL1_DMSO_200M_050219_1,17117 HBL1_DMSO_200M_050219_1,17117,GVLSSDGVWRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17118 82.303 349.0 665010.0 25 0 44939.0 + 15535 IPVPTITWI 9 179 520.3144726798404 1038.614392426481 2 520.3147460818291 MULTI CID FTMS 0 0 0 17112 349272.0625 0.2174688274158412 13 -1.111602783203125 6 Unmodified _IPVPTITWI_ ENSG00000030304|ENST00000374448|MUSK;nc|ENSG00000030304|O15146-2|MUSK;nc|ENSG00000030304|O15146-3|MUSK 36.04419817259434 0.0971720506436186 3 {I|L}PPE{I|L}{I|L}MKV 9 6 + 68.192 0.0 0.0 6.5657 6.5657 88.088 0.0 0.0 0.0 14.331229872541726 8.270209938855558 8.270209938855558 8.270209938855558 0 1.305462187404089 2.0 0.0 0.1595680409956017 {I|L}PPE{I|L}{I|L}MKV;{I|L}PPE{I|L}{I|L}KVM;{I|L}PPE{I|L}{I|L}KMV;{I|L}PV[RH][YR]V;{I|L}PV[HA]Y{I|L}KV;{I|L}PV[RH][HA]P{I|L};{I|L}PV[HA]PPVP{I|L};{I|L}PQ[Y{I|L}]PVP{I|L};{I|L}PQ{[QD]|[EN]|[WG]|[KD]|[RS]}[KT]P{I|L};{I|L}PQ{[QD]|[EN]|[WG]|[KD]|[RS]}[Q{I|L}]VV 6.5657;5.7694;5.5558;3.8742;3.7944;3.336;2.8657;2.7607;2.2008;1.8882 -;-;-;-;-;-;-;-;-;- 1926 + 1 0.983 186447.3 1.0 11423 5693 17112 HBL1_DMSO_200M_050219_1,17118 HBL1_DMSO_200M_050219_1,17118,IPVPTITWI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17119 82.31 347.0 339160.0 25 0 39726.0 + 16096 RVLELVSITA 10 139 550.8375055971928 1099.6604582611856 2 550.8401367068291 MULTI CID FTMS 0 0 0 17112 275310.6875 0.6289507433375758 -1 0.050750732421875 7 Unmodified _ITSAVLVERL_ ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENSG00000182199|ENST00000328923|SHMT2;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;ENST00000556798.1_1_12:57627435-57627797:+|nuORF;nc|ENSG00000182199|P34897-3|SHMT2;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 30.63653989081413 0.2803493085145199 3 [{I|L}T]S[VP]{I|L}VS{I|L}TA 11 5 + 72.604 0.0 0.0 6.6024 6.6024 86.756 0.0 0.0 0.0 6.493339962300695 16.575773191777927 6.493339962300695 6.493339962300695 0 0.5 1.0969100130080565 1.3684151806525389 0.0 [{I|L}T]S[VP]{I|L}VS{I|L}TA;{[TV]|[{I|L}S]}T[VP]{I|L}VS{I|L}TA;{[QN]|[E{I|L}]|[KN]}[RV]{I|L}VS{I|L}TA;[{I|L}T][TP]VVVS{I|L}TA;[{I|L}A]G[KQ]{I|L}VS{I|L}TA;{[QN]|[E{I|L}]|[KN]}{[VA]|[{I|L}G]}VVVS{I|L}TA;[Q{I|L}][KQ]{I|L}VS{I|L}TA;[{I|L}V]W[{I|L}V]VS{I|L}TA;[VP]S[{I|L}T]{I|L}VS{I|L}TA;{[QN]|[E{I|L}]|[KN]}[RV]{I|L}[W{I|L}]TA 6.6024;6.0119;5.6145;4.6388;4.3534;4.2377;4.1012;4.0564;3.9306;3.4082 -;-;-;-;-;-;-;-;-;- 670 1 0.983 98278.5 1.0 11424 5693 17112 HBL1_DMSO_200M_050219_1,17119 HBL1_DMSO_200M_050219_1,17119,ITSAVLVERL False False RVLELVSITA 82.3096 550.840136706829 4123416.75 17112.0 ENST00000553837.5_1_12:57625333-57628141:+|nuORF;;ENSG00000182199|ENST00000328923|SHMT2;;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;;nc|ENSG00000182199|P34897-2|SHMT2;;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;;ENST00000556798.1_1_12:57627435-57627797:+|nuORF;;nc|ENSG00000182199|P34897-3|SHMT2;;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 4.962190628051758 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17120 82.319 520.0 372960.0 25 0 72470.0 16298 IWPKLRVL 8 173 342.2274923315921 0 342.2280456423759 PEAK CID FTMS 0 0 0 17112 238565.1875 0.5445501409544385 1 -0.1470184326171875 8 Unmodified _IWPKLRVL_ ENSG00000058668|ENST00000357681|ATP2B4;ENSG00000070961|ENST00000428670|ATP2B1;ENSG00000157087|ENST00000360273|ATP2B2;nc|ENSG00000058668|P23634-2|ATP2B4;nc|ENSG00000058668|P23634-3|ATP2B4;nc|ENSG00000058668|P23634-4|ATP2B4;nc|ENSG00000058668|P23634-5|ATP2B4;nc|ENSG00000058668|P23634-7|ATP2B4;nc|ENSG00000058668|P23634-8|ATP2B4;nc|ENSG00000058668|P23634|ATP2B4;nc|ENSG00000070961|P20020-1|ATP2B1;nc|ENSG00000070961|P20020-2|ATP2B1;nc|ENSG00000070961|P20020-4|ATP2B1;nc|ENSG00000070961|P20020-5|ATP2B1;nc|ENSG00000070961|P20020-6|ATP2B1;nc|ENSG00000157087|Q01814-2|ATP2B2;nc|ENSG00000157087|Q01814-3|ATP2B2;nc|ENSG00000157087|Q01814-4|ATP2B2;nc|ENSG00000157087|Q01814-5|ATP2B2;nc|ENSG00000157087|Q01814-6|ATP2B2;nc|ENSG00000157087|Q01814-7|ATP2B2;nc|ENSG00000157087|Q01814-8|ATP2B2 0.4583401331227399 0.5992596052108689 3 G 1 8 5.4846 0.0 0.0 0.80367 0.0 0.0 359.2299237572849 263.1659209520337 622.3958447093187 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.80367 - 8 + 1 0.983 154769.7 1.0 11425 5693 17112 HBL1_DMSO_200M_050219_1,17120 HBL1_DMSO_200M_050219_1,17120,IWPKLRVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17121 82.325 365.0 205770.0 25 0 16232.0 -1 0 98 1036.447924792767 0 1036.447924792767 PEAK CID FTMS 0 0 0 -1 0 9 3 NENY[HS]M[HQ]VMY 12 -1 37.718 0.0 0.0 1.8214 0.0 0.0 291.113779732508 243.11458765201408 534.2283673845221 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.2302046884880935 NENY[HS]M[HQ]VMY 1.8214 - 1699 + 1 0.983 56277.1 1.0 11426 5693 17112 HBL1_DMSO_200M_050219_1,17121 HBL1_DMSO_200M_050219_1,17121, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17122 82.332 362.0 154580.0 25 0 10356.0 -1 0 81 1002.936497260218 2003.858441587236 2 1003.437670886517 MULTI CID FTMS 0 0 0 17112 182179.546875 0.6773791162454222 1 -0.1470184326171875 10 3 [YQ]{I|L}ENYV 7 -1 37.281 0.0 0.0 1.8605 0.0 0.0 0.0 1091.4064982823515 1091.4064982823515 13.419693766594705 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7059771852360797 [YQ]{I|L}ENYV 1.8605 - 1696 1 0.983 45823.0 1.0 11427 5693 17112 HBL1_DMSO_200M_050219_1,17122 HBL1_DMSO_200M_050219_1,17122, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17123 82.342 568.0 700500.0 25 0 72808.0 23012 LSHSSGPEL 9 257 309.4904109860205 925.4494035582616 3 309.4899780154228 MULTI CID FTMS 0 0 0 17112 199069.15625 0.1581081397702688 7 -0.5943145751953125 11 Unmodified _LSHSSGPEL_ ENSG00000005379|ENST00000343736|TSPOAP1;nc|ENSG00000005379|O95153-2|TSPOAP1;nc|ENSG00000005379|O95153-3|TSPOAP1 16.942295170755138 0.3780752226737986 3 [{I|L}A]P[C(Carbamidomethyl (C))H]GQ 7 7 25.083 0.0 0.0 2.7104 0.0 0.0 0.0 159.0665477412695 159.0665477412695 5.61944923515496 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.2742275032520141 [{I|L}A]P[C(Carbamidomethyl (C))H]GQ 2.7104 - 570 1 0.983 311849.9 1.0 11428 5693 17112 HBL1_DMSO_200M_050219_1,17123 HBL1_DMSO_200M_050219_1,17123,LSHSSGPEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17124 82.35 384.0 814240.0 25 0 103410.0 + 31868 RTLDELGIHL 10 139 583.8303286798638 1165.6461044265277 2 583.8303710818291 MULTI CID FTMS 0 0 0 17112 189485.640625 0.0537305329026625 -2 0.1368255615234375 12 Unmodified _RTLDELGIHL_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 83.42873516780209 0.014257832770272 3 DE{I|L}G{I|L}H{I|L} 7 3 79.456 0.0 0.0 6.8165 0.0 0.0 370.23436171699376 0.0 370.23436171699376 0.0 46.34720730648759 0.0 0.0 0 2.524227503252014 0.0 0.6747425010840047 0.0 + DE{I|L}G{I|L}H{I|L} 6.8165 + + 808 1 0.983 230584.5 1.0 11429 5693 17112 HBL1_DMSO_200M_050219_1,17124 HBL1_DMSO_200M_050219_1,17124,RTLDELGIHL True True RTLDELGIHL 82.349945 583.830371081829 19695034.0 17112.0 nc|ENSG00000108883|Q15029-3|EFTUD2;;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 5.057402531305949 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17125 82.358 426.0 346860.0 25 0 65501.0 -1 0 106 921.441425549001 1840.868298164802 2 921.4467040896416 MULTI CID FTMS 0 0 0 17112 197137.03125 0.6822583319282712 -2 0.1368255615234375 13 3 Y{M(Oxidation (M))|F}ANQQ 6 -1 37.868 0.0 0.0 2.0571 0.0 0.0 358.22047082114346 728.3037813775999 1086.5242521987434 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.7742275032520141 Y{M(Oxidation (M))|F}ANQQ 2.0571 - 320 + 1 0.983 99117.2 1.0 11430 5693 17112 HBL1_DMSO_200M_050219_1,17125 HBL1_DMSO_200M_050219_1,17125, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17126 82.365 435.0 201850.0 25 0 14623.0 -1 0 115 951.4586522525456 1900.902751571891 2 951.9598876833916 MULTI CID FTMS 0 0 0 17112 164557.59375 0.5322225593492339 1 -0.1470184326171875 14 3 [KT]EY{M(Oxidation (M))|F}A{[{M(Oxidation (M))|F}H]|[RQ]}Y[Y{I|L}]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 14 -1 + 32.361 0.0 0.0 1.7024 1.7024 79.97 0.0 0.0 0.0 14.658132283468955 8.371600865782867 8.371600865782867 17.623569832004115 0 0.0 0.0 0.0 0.0 [KT]EY{M(Oxidation (M))|F}A{[{M(Oxidation (M))|F}H]|[RQ]}Y[Y{I|L}]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}A{[{M(Oxidation (M))|F}H]|[RQ]}Y{M(Oxidation (M))|F}NP[QP]{I|L} 1.7024;0.77529 -;- 1336 + 1 0.983 60627.7 1.0 11431 5693 17112 HBL1_DMSO_200M_050219_1,17126 HBL1_DMSO_200M_050219_1,17126, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17127 82.375 562.0 302330.0 25 0 29899.0 + 7416 EGLKLMNL 8 181 459.2599384518214 916.5053239704428 2 459.2596618533134 MULTI CID FTMS 0 0 0 17112 171010.59375 0.240411251744543 2 -0.1940231323242187 15 Unmodified _EGLKLMNL_ ENSG00000177200|ENST00000447540|CHD9;ENST00000569225.5_1_16:53269177-53281416:+|nuORF;nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9 52.268347100219714 0.1285778651304833 3 {[DA]|[EG]}{I|L}K{I|L}MN{I|L} 8 0 + 37.617 0.0 0.0 4.1044 4.1044 83.538 0.0 0.0 0.0 3.8693178344330192 -1.450499166947516 -1.450499166947516 14.125287269549167 0 0.8226825097560424 1.5228787452803376 0.3807196863200844 0.0 + + {[DA]|[EG]}{I|L}K{I|L}MN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}MN{I|L};[{I|L}A]DK{I|L}MN{I|L};{NN|[MP]|[D{I|L}]|[EV]}MK{I|L}AN{I|L};[{I|L}T]WS{I|L}AN{I|L};{[TV]|[{I|L}S]}VQ{I|L}MN{I|L};[{I|L}T]{[NV]|[RG]}{I|L}MN{I|L};{[SA]|[TG]}[R{I|L}]{I|L}MN{I|L};{[SA]|[TG]}[NS]K{I|L}AN{I|L};[VS]{I|L}Q{I|L}MN{I|L} 4.1044;2.5632;2.0163;1.8952;1.7693;1.4231;1.0978;0.99186;0.78914;0.69762 +;-;-;-;-;-;-;-;-;- + 723 1 0.983 131995.8 1.0 11432 5693 17112 HBL1_DMSO_200M_050219_1,17127 HBL1_DMSO_200M_050219_1,17127,EGLKLMNL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17128 82.384 507.0 629200.0 25 0 64331.0 45066 YPYGSPPPLI 10 214 552.2923181377896 1102.5700833423791 2 552.7939330935478 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _YPYGSPPPLI_ ENSG00000150347|ENST00000279873|ARID5B;nc|ENSG00000150347|Q14865-2|ARID5B 26.88365393820708 0.3646707531412818 3 P{I|L} 2 8 34.949 0.0 0.0 3.1697 0.0 0.0 0.0 889.390793253671 889.390793253671 18.194721394622096 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + P{I|L} 3.1697 + + 2116 + 1 0.983 243064.4 1.0 11433 5693 17112 HBL1_DMSO_200M_050219_1,17128 HBL1_DMSO_200M_050219_1,17128,YPYGSPPPLI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17129 82.393 437.0 183570.0 25 0 55473.0 + -1 AYFEKTQEELTPF 13 105 801.8872939748411 0 801.8886596560478 PEAK CID FTMS 0 0 0 17112 145099.578125 0.4044391665351399 -1 0.050750732421875 17 Carbamidomethyl (C) _NPRRWWRWC(Carbamidomethyl (C))W_ P81644 0.4007161486938917 0.3961065659209837 3 T[HQ]TK{M(Oxidation (M))|F}TM 8 -1 30.78 0.0 0.0 1.9216 0.0 0.0 496.231015911908 128.0723055475219 624.3033214594299 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.6747425010840047 0.3494850021680094 T[HQ]TK{M(Oxidation (M))|F}TM 1.9216 - 1179 + 1 0.983 59618.7 1.0 11434 5693 17112 HBL1_DMSO_200M_050219_1,17129 HBL1_DMSO_200M_050219_1,17129,NPRRWWRWCW False False AYFEKTQEELTPF 82.393099 801.888659656048 3955624.5 17112.0 P81644 7.624436378479004 2.0 False 13.0 True unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17130 82.4 407.0 77113.0 25 0 5541.3 -1 0 77 738.6776611208916 0 738.6776611208916 PEAK CID FTMS 0 0 0 -1 0 18 3 {I|L} 1 -1 5.4846 0.0 0.0 0.37175 0.0 0.0 737.9322132556518 621.3034762018186 1359.2356894574705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.37175 - 5 + 1 0.983 31002.9 1.0 11435 5693 17112 HBL1_DMSO_200M_050219_1,17130 HBL1_DMSO_200M_050219_1,17130, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17131 82.41 570.0 420710.0 25 0 56546.0 + 32500 SALGYLHSL 9 208 480.7609550957986 959.5073572583972 2 480.7609130740166 MULTI CID FTMS 0 0 0 17112 122332.5859375 0.0429394324562842 7 -0.5943145751953125 19 Unmodified _SALGYLHSL_ ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1 49.93300154707207 0.0405168250806675 3 {[SA]|[TG]}{I|L}GY{I|L}HS{I|L} 9 0 + 61.908 0.0 0.0 6.4521 6.4521 81.384 0.0 0.0 0.0 19.366130211356065 2.632414347745815 2.632414347745815 2.632414347745815 0 0.8494850021680094 1.5228787452803376 1.079689690656103 0.0 + + {[SA]|[TG]}{I|L}GY{I|L}HS{I|L};{[SA]|[TG]}{I|L}GY{I|L}HTV;{[SA]|[TG]}{I|L}GY{I|L}SH{I|L};{[SA]|[TG]}{I|L}GY{I|L}S{I|L}H;{[SA]|[TG]}S[{M(Oxidation (M))|F}V]{I|L}HS{I|L};{[SA]|[TG]}S[{M(Oxidation (M))|F}V]{I|L}HTV;{[SA]|[TG]}{I|L}GY[HV]T{I|L};{[SA]|[TG]}{I|L}GY[HS]{I|L}{I|L};{[SA]|[TG]}S[{M(Oxidation (M))|F}V]{I|L}SH{I|L};{[SA]|[TG]}S[{M(Oxidation (M))|F}V]{I|L}S{I|L}H 6.4521;6.1778;5.1718;4.169;3.5089;3.2345;3.0474;2.8741;2.2286;1.2258 +;-;-;-;-;-;-;-;-;- + 976 + 1 0.983 181631.6 1.0 11436 5693 17112 HBL1_DMSO_200M_050219_1,17131 HBL1_DMSO_200M_050219_1,17131,SALGYLHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17132 82.423 709.0 472370.0 25 0 35181.0 5954 DQKKDKRFV 9 204 388.55714356803657 1162.6496013043095 3 388.8918029665947 MULTI CID FTMS 0 0 0 17112 130073.9921875 0.945855736339989 1 -0.1470184326171875 20 Unmodified _DQKKDKRFV_ ENSG00000150316|ENST00000279839|CWC15 24.020572477871973 0.2255576514309169 3 [H{I|L}]G{I|L}PR{M(Oxidation (M))|F}QPV 10 8 + 34.937 0.0 0.0 3.005 3.005 73.962 0.0 0.0 0.0 5.416497307908681 7.627295772946059 5.416497307908681 4.503187623076954 0 0.2753187046026266 1.0 0.0 0.0 [H{I|L}]G{I|L}PR{M(Oxidation (M))|F}QPV;[H{I|L}]G{I|L}{I|L}{[WT]|[RM]}QPV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F}R{M(Oxidation (M))|F}QPV;[H{I|L}]G{I|L}PRWWV;[QP]VK[QP]DRPV;[H{I|L}]G{I|L}P[VG]{M(Oxidation (M))|F}QPV;[QP]V{[WT]|[RM]}{I|L}G{I|L}H{I|L};[QP]V{[WT]|[RM]}{I|L}{I|L}GH{I|L};[QP]V{[WT]|[RM]}{I|L}{I|L}G{I|L}H;[QP]V{[WT]|[RM]}{I|L}G{I|L}{I|L}H 3.005;2.6176;2.5278;2.4312;2.3627;2.2167;2.0324;2.0324;2.0324;2.0324 -;-;-;-;-;-;-;-;-;- 1718 1 0.983 267900.0 1.0 11437 5693 17112 HBL1_DMSO_200M_050219_1,17132 HBL1_DMSO_200M_050219_1,17132,DQKKDKRFV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17134 82.427 2.8 16068000.0 25 0 1822000.0 + 3887 DALDKIRLI 9 71 528.8239744481274 1055.633395963055 2 528.8245727419853 MULTI CID FTMS 0 0 0 17133 11662075.0 0.0802562907809719 5 -0.350860595703125 1 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 31.26834338654808 0.1333407332142048 3 DA{I|L}DK{I|L}[R{I|L}]{I|L} 9 0 + 73.109 0.0 0.0 6.9256 6.9256 95.183 0.0 0.0 0.0 32.44219050288216 4.973024840566467 4.973024840566467 73.10911268361153 0 0.8494850021680094 1.6989700043360187 0.0 0.0 + + DA{I|L}DK{I|L}[R{I|L}]{I|L} 6.9256 + + 106 + 1 0.977 40495.6 1.0 11438 5694 17133 HBL1_DMSO_200M_050219_1,17134 HBL1_DMSO_200M_050219_1,17134,DALDKIRLI False True DALDKIRLI 82.426807 528.824572741985 10658750720.0 17133.0 ENSG00000166598|ENST00000299767|HSP90B1;;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 4.082760016123454 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17135 82.428 3.9 9708400.0 25 0 1126800.0 + 22893 LSCVPSALL 9 66 451.7527689299804 901.4909849267608 2 451.7528869509697 MULTI CID FTMS 0 0 0 17133 17991362.0 0.2296411884909435 8 -0.5858078002929688 2 Unmodified _LSCVPSALL_ REV__ENSG00000165449|ENST00000395348|SLC16A9 28.486842064014134 0.1687311288560894 3 [{I|L}A][WE]S 5 -1 30.202 0.0 0.0 3.3502 0.0 0.0 0.0 312.1912772453733 312.1912772453733 10.949302836445014 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A][WE]S 3.3502 - 49 1 0.977 36994.5 1.0 11439 5694 17133 HBL1_DMSO_200M_050219_1,17135 HBL1_DMSO_200M_050219_1,17135,LSCVPSALL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17136 82.429 2.9 15773000.0 25 0 1690500.0 28805 PYTCVSCGAR 10 79 528.7318174317871 1055.4490819303742 2 528.7328369021416 MULTI CID FTMS 0 0 0 17133 11649295.0 0.9255016641765326 -1 0.1470184326171875 3 Unmodified _PYTCVSCGAR_ ENSG00000106400|ENST00000305105|ZNHIT1;ENST00000485387.1_1_7:100865814-100867236:+|nuORF;ENST00000492315.5_1_7:100864992-100867236:+|nuORF 19.256988751693697 0.5244284437930726 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TMP 5 7 38.359 0.0 0.0 3.6343 0.0 0.0 0.0 463.1647551083617 463.1647551083617 3.756565231880984 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.9489700043360187 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TMP 3.6343 - 121 1 0.977 40913.1 1.0 11440 5694 17133 HBL1_DMSO_200M_050219_1,17136 HBL1_DMSO_200M_050219_1,17136,PYTCVSCGAR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17137 82.43 17.0 3906700.0 25 0 233340.0 + 9908 FPFYGKPMRI 10 68 628.3364646422485 1254.658376351297 2 628.3369018435478 MULTI CID FTMS 0 0 0 17133 4303317.5 0.9491483273956204 -4 0.35662841796875 4 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 34.40172386719151 0.2166836008404837 3 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 7 5 72.3 0.0 0.0 5.7625 0.0 0.0 0.0 399.18329797916255 399.18329797916255 37.35100095250324 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.0 0.0 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 5.7625 - 476 + 1 0.977 53819.4 1.0 11441 5694 17133 HBL1_DMSO_200M_050219_1,17137 HBL1_DMSO_200M_050219_1,17137,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17138 82.432 12.0 1962400.0 25 0 144170.0 + 3894 DALDKIRLI 9 59 352.8853732487592 1055.6342903464777 3 352.8851806521416 MULTI CID FTMS 0 0 0 17133 3014414.0 0.0883709795553937 6 -0.447296142578125 5 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 13.90604991867851 0.4602628045680013 3 [W{I|L}]DK{I|L} 5 5 22.218 0.0 0.0 2.1048 0.0 0.0 0.0 397.2576998346313 397.2576998346313 18.239087409443187 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [W{I|L}]DK{I|L} 2.1048 - 16 + 1 0.977 27643.9 1.0 11442 5694 17133 HBL1_DMSO_200M_050219_1,17138 HBL1_DMSO_200M_050219_1,17138,DALDKIRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17139 82.433 25.0 2046900.0 25 0 340800.0 + 20674 LLRELYVLT 9 80 560.3401147610329 1118.6656765888656 2 560.3401367068291 MULTI CID FTMS 0 0 0 17133 2608619.25 0.4682878931436882 2 -0.162994384765625 6 Unmodified _LLRELYVLT_ REV__ENSG00000108100|ENST00000374704|CCNY;REV__ENSG00000163249|ENST00000295414|CCNYL1;REV__nc|ENSG00000108100|Q8ND76-2|CCNY;REV__nc|ENSG00000108100|Q8ND76-3|CCNY;REV__nc|ENSG00000163249|Q8N7R7-2|CCNYL1;REV__nc|ENSG00000163249|Q8N7R7-3|CCNYL1 2.059750862983233 0.8427793054688888 3 {I|L} 1 -1 11.594 0.0 0.0 1.0364 0.0 0.0 987.570749686325 0.0 987.570749686325 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0364 + + 8 + 1 0.977 45029.9 1.0 11443 5694 17133 HBL1_DMSO_200M_050219_1,17139 HBL1_DMSO_200M_050219_1,17139,LLRELYVLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17140 82.434 20.0 4110700.0 25 0 824260.0 + 21169 LPCDICGPIL 10 107 579.2881166872413 1156.5616804412823 2 579.2888061404228 MULTI CID FTMS 0 0 0 17133 2301457.0 0.3621124349042945 -5 0.4370651245117187 7 2 Carbamidomethyl (C) _LPC(Carbamidomethyl (C))DIC(Carbamidomethyl (C))GPIL_ ENSG00000213762|ENST00000396161|ZNF134 48.345845343767074 0.089859443182303 3 [{I|L}T]{M(Oxidation (M))|F}ST{[{M(Oxidation (M))|F}D]|MM}T{I|L}{I|L} 10 7 + 55.498 0.0 0.0 4.7986 4.7986 81.918 0.0 0.0 0.0 12.050018420352169 18.792811280970987 12.050018420352169 7.7815125038364386 0 0.5 2.0 1.394599018282542 0.0 [{I|L}T]{M(Oxidation (M))|F}ST{[{M(Oxidation (M))|F}D]|MM}T{I|L}{I|L};[{I|L}T]{M(Oxidation (M))|F}ST[{M(Oxidation (M))|F}E]S{I|L}{I|L};[{I|L}T][WM]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}HP{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[MT]{I|L};[VP][HD]PYCT{I|L}{I|L};[VP][WY]YCT{I|L}{I|L};[VP][HD]T{[{M(Oxidation (M))|F}D]|MM}T{I|L}{I|L};[{I|L}P]HE{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[MT]{I|L};[VP][HD]T{[YC]|[HE]}P{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV]PYCT{I|L}{I|L} 4.7986;4.1258;3.0912;2.7549;2.6537;2.6095;2.3542;2.3496;2.331;2.169 -;-;-;-;-;-;-;-;-;- 868 1 0.977 65229.6 1.0 11444 5694 17133 HBL1_DMSO_200M_050219_1,17140 HBL1_DMSO_200M_050219_1,17140,LPCDICGPIL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17141 82.436 75.0 621710.0 25 0 109620.0 + 21246 LPDNKPIKVL 10 70 568.8536832095962 1135.6928134859922 2 568.8535644412041 MULTI CID FTMS 0 0 0 17133 1815332.25 0.7274554868205885 2 -0.162994384765625 8 Unmodified _LPDNKPIKVL_ REV__ENSG00000118985|ENST00000237853|ELL2;REV__ENST00000413990.1_1_1:158146977-158147493:-|nuORF;REV__nc|ENSG00000118985|O00472-2|ELL2 3.944395688203298 0.708391353636983 3 {I|L} 1 -1 10.485 0.0 0.0 0.92319 0.0 0.0 1004.5976729604048 0.0 1004.5976729604048 0.0 0.303489201768059 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.92319 + + 27 + 1 0.977 47870.0 1.0 11445 5694 17133 HBL1_DMSO_200M_050219_1,17141 HBL1_DMSO_200M_050219_1,17141,LPDNKPIKVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17142 82.437 47.0 2469400.0 25 0 450500.0 + 1233 AIIPRVPSL 9 106 483.3108134442026 0 483.3110229372978 PEAK CID FTMS 0 0 0 17133 1436371.125 0.7912475841096178 -1 0.1470184326171875 9 Unmodified _AIIPRVPSL_ ENSG00000152464|ENST00000378197|RPP38 41.8396318013385 0.053988301646488 3 AVVTPA{I|L} 7 6 21.368 0.0 0.0 2.2152 0.0 0.0 129.09097395696148 181.0988405817016 310.1898145386631 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 AVVTPA{I|L} 2.2152 - 433 + 1 0.977 95043.6 1.0 11446 5694 17133 HBL1_DMSO_200M_050219_1,17142 HBL1_DMSO_200M_050219_1,17142,AIIPRVPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17143 82.438 36.0 1207700.0 25 0 139860.0 -1 MLLMRLPR 8 85 523.3041480219179 1044.5937431106356 2 523.8055908083916 MULTI CID FTMS 0 0 0 17133 1262324.5 0.3095803358622717 5 -0.350860595703125 10 Oxidation (M) _MLLM(Oxidation (M))RLPR_ ENSG00000120658|ENST00000690772|ENOX1 14.581692164780916 0.6954967302934248 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{M(Oxidation (M))|F}P 8 -1 25.036 0.0 0.0 2.3968 0.0 0.0 0.0 109.0618287726866 109.0618287726866 1.647070268612552 0.0 0.0 0.0 0 0.3054621874040891 0.958607314841775 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{M(Oxidation (M))|F}P 2.3968 - 238 1 0.977 40971.9 1.0 11447 5694 17133 HBL1_DMSO_200M_050219_1,17143 HBL1_DMSO_200M_050219_1,17143,MLLMRLPR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17144 82.44 111.0 1082100.0 25 0 131200.0 + 9982 FPHKPIILI 9 122 539.3445524616986 1076.6745519901972 2 539.3443481326103 MULTI CID FTMS 0 0 0 17133 1145409.25 0.7076159923073484 2 -0.162994384765625 11 Unmodified _FPHKPIILI_ ENSG00000114982|ENST00000431828|KANSL3;ENST00000447759.5_3_2:97261350-97293793:-|nuORF;ENST00000487070.5_1_2:97267510-97285240:-|nuORF;ENST00000488907.5_1_2:97276365-97278231:-|nuORF;ENST00000597150.5_1_2:97261350-97297069:-|nuORF;nc|ENSG00000114982|Q9P2N6-2|KANSL3;nc|ENSG00000114982|Q9P2N6-4|KANSL3;nc|ENSG00000114982|Q9P2N6-5|KANSL3;nc|ENSG00000114982|Q9P2N6-6|KANSL3;nc|ENSG00000114982|Q9P2N6-8|KANSL3;nc|ENSG00000114982|Q9P2N6|KANSL3 64.23631603340823 0.0237365939569086 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HK{I|L}P{I|L}{I|L}{I|L} 9 2 + 66.132 0.0 0.0 6.1422 6.1422 89.993 0.0 0.0 0.0 13.08140718103877 14.97302484056646 13.08140718103877 13.08140718103877 0 1.8754223615526 1.3979400086720375 0.5138793319624578 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HK{I|L}P{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{I|L}{I|L}M{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}K{I|L}P{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{M(Oxidation (M))|F}{I|L}P{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{I|L}{M(Oxidation (M))|F}P{I|L}{I|L}{I|L};{I|L}{I|L}PKHM{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}{I|L};[HK]P{I|L}{I|L}M{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{I|L}{I|L}{I|L}M{I|L}{I|L};{[TV]|[{I|L}S]}K{M(Oxidation (M))|F}{I|L}M{I|L}{I|L}{I|L} 6.1422;4.9272;4.8853;4.8377;4.7637;4.7264;4.5576;4.4925;4.4841;4.448 -;-;-;-;-;-;-;-;-;- 1436 1 0.977 98266.9 1.0 11448 5694 17133 HBL1_DMSO_200M_050219_1,17144 HBL1_DMSO_200M_050219_1,17144,FPHKPIILI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17145 82.442 73.0 1444200.0 25 0 152740.0 + -1 MLCSGPPFL 9 109 490.7324659451882 979.4503789571764 2 490.7328063845634 MULTI CID FTMS 0 0 0 17133 917325.5625 0.7605730691632302 -2 0.1977691650390625 12 Oxidation (M) _M(Oxidation (M))LCSGPPFL_ REV__ENST00000375893.6_1_6:31632636-31633398:-|nuORF;REV__ENST00000375895.6_1_6:31632636-31633491:-|nuORF 19.438996006549623 0.310492472477042 3 [{I|L}T]C{I|L}V 5 -1 39.922 0.0 0.0 4.0759 0.0 0.0 0.0 447.1357271374375 447.1357271374375 23.52182518111362 0.0 0.0 0.0 0 0.5 2.0 0.3494850021680094 0.0 [{I|L}T]C{I|L}V 4.0759 - 595 1 0.977 86768.5 1.0 11449 5694 17133 HBL1_DMSO_200M_050219_1,17145 HBL1_DMSO_200M_050219_1,17145,MLCSGPPFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17146 82.443 53.0 1331800.0 25 0 206810.0 + + -1 NQVGIVLNV 9 107 478.2091679885692 954.4037830439383 2 478.2087280154228 MULTI CID FTMS 0 0 0 17133 874530.375 0.4211859403913762 8 -0.5858078002929688 13 2 Oxidation (M) _DVDM(Oxidation (M))M(Oxidation (M))SLI_ nc|ENSG00000143442|Q7Z3K3-6|POGZ;nc|ENSG00000143442|Q7Z3K3-3|POGZ;nc|ENSG00000143442|Q7Z3K3-2|POGZ;ENST00000467287.5_1_1:151401965-151414680:-|nuORF;nc|ENSG00000143442|Q7Z3K3-7|POGZ;ENSG00000143442|ENST00000271715|POGZ;nc|ENSG00000143442|Q7Z3K3-4|POGZ 9.347437153973935 0.7675937258251505 3 [{I|L}A]P 3 -1 20.546 0.0 0.0 2.1528 0.0 0.0 0.0 670.2063397668477 670.2063397668477 -0.3959062302381255 0.0 -0.3959062302381255 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]P 2.1528 - 176 1 0.977 56538.2 1.0 11450 5694 17133 HBL1_DMSO_200M_050219_1,17146 HBL1_DMSO_200M_050219_1,17146,DVDMMSLI False False NQVGIVLNV 82.44349 478.208728015423 1500374.375 17133.0 nc|ENSG00000143442|Q7Z3K3-6|POGZ;;nc|ENSG00000143442|Q7Z3K3-3|POGZ;;nc|ENSG00000143442|Q7Z3K3-2|POGZ;;ENST00000467287.5_1_1:151401965-151414680:-|nuORF;;nc|ENSG00000143442|Q7Z3K3-7|POGZ;;ENSG00000143442|ENST00000271715|POGZ;;nc|ENSG00000143442|Q7Z3K3-4|POGZ 2.7937957445780435 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17147 82.448 233.0 742140.0 25 0 110450.0 + 36264 SYFEKETLTF 10 137 632.8085172986454 1263.6024816640906 2 632.8090087771416 MULTI CID FTMS 0 0 0 17133 834257.5625 0.2470819676816458 -2 0.1977691650390625 14 Unmodified _SYFEKETLTF_ ENSG00000196705|ENST00000311048|ZNF431 82.44511118730084 0.0150639512906888 3 [{I|L}T]TRT{M(Oxidation (M))|F}{M(Oxidation (M))|F}MT{M(Oxidation (M))|F} 10 8 + 73.757 0.0 0.0 5.837 5.837 77.614 0.0 0.0 0.0 1.4608721583388444 12.980690886789487 1.4608721583388444 1.4608721583388444 0 1.3494850021680094 1.154901959985743 2.392159058960253 0.0 [{I|L}T]TRT{M(Oxidation (M))|F}{M(Oxidation (M))|F}MT{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F}MT{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TT{M(Oxidation (M))|F}{M(Oxidation (M))|F}MT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}T{M(Oxidation (M))|F};[{I|L}A]{[CA]|SS}{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F}MT{M(Oxidation (M))|F};[{I|L}T]TRT{M(Oxidation (M))|F}{M(Oxidation (M))|F}EC{M(Oxidation (M))|F};[{I|L}T]TRT{M(Oxidation (M))|F}E{M(Oxidation (M))|F}C{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F}EC{M(Oxidation (M))|F};[{I|L}T]TRE{M(Oxidation (M))|F}T{M(Oxidation (M))|F}C{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}ET{I|L}T{M(Oxidation (M))|F}C{M(Oxidation (M))|F} 5.837;5.7214;5.178;5.1048;5.0235;4.9614;4.8458;4.8458;4.8301;4.8015 -;-;-;+;-;-;-;-;-;- + 10912 1 0.977 129471.1 1.0 11451 5694 17133 HBL1_DMSO_200M_050219_1,17147 HBL1_DMSO_200M_050219_1,17147,SYFEKETLTF True True SYFEKETLTF 82.447884 632.809008777142 25386720.0 17133.0 ENSG00000196705|ENST00000311048|ZNF431 9.15275796254476 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17148 82.449 57.0 1285700.0 25 0 159460.0 -1 VENYCLPE 8 104 512.2280951235653 1022.4416373139304 2 512.2285644412041 MULTI CID FTMS 0 0 0 17133 754460.3125 0.2527240445745592 2 -0.162994384765625 15 Carbamidomethyl (C) _VENYC(Carbamidomethyl (C))LPE_ ENSG00000163781|ENST00000260810|TOPBP1 16.942295170755138 0.6606234159769251 3 {NN|[MP]|[D{I|L}]|[EV]}A{I|L}PY 6 -1 26.375 0.0 0.0 2.5796 0.0 0.0 0.0 347.0672836364492 347.0672836364492 -2.006594505464186 0.0 -2.006594505464186 0.0 0 0.0 1.0969100130080565 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}A{I|L}PY 2.5796 - 435 1 0.977 64671.4 1.0 11452 5694 17133 HBL1_DMSO_200M_050219_1,17148 HBL1_DMSO_200M_050219_1,17148,VENYCLPE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17149 82.455 288.0 806650.0 25 0 78378.0 + 3072 AVMEQIPEI 9 190 515.2678635897037 1028.5211742462072 2 515.2678100466728 MULTI CID FTMS 0 0 0 17133 628531.3125 0.205186173099621 3 -0.2176437377929687 16 Unmodified _AVMEQIPEI_ ENSG00000124571|ENST00000265351|XPO5;ENST00000455854.2_1_6:43491608-43492751:-|nuORF 46.020951573049366 0.0490941689151868 3 {[QN]|[E{I|L}]|[KN]}QMG{I|L} 6 6 32.48 0.0 0.0 3.1579 0.0 0.0 0.0 354.1668934763309 354.1668934763309 1.717725547025033 0.0 0.0 0.0 0 0.7742275032520141 1.0 0.4225924581435253 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}QMG{I|L} 3.1579 - 3010 1 0.977 182117.8 1.0 11453 5694 17133 HBL1_DMSO_200M_050219_1,17149 HBL1_DMSO_200M_050219_1,17149,AVMEQIPEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17150 82.46 272.0 761680.0 25 0 55157.0 + 43881 YFQALVNNM 9 183 550.2654890475214 1098.5164251618428 2 550.2665283083916 MULTI CID FTMS 0 0 0 17133 608211.25 1.0 0 0.0 17 Unmodified _YFQALVNNM_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 57.47134341890925 0.0274820932774257 3 [{I|L}V]WV{I|L}VS{I|L}T 9 7 29.045 0.0 0.0 2.644 0.0 0.0 0.0 84.87995673707829 84.87995673707829 1.4035529686697004 0.0 0.0 0.0 0 0.0 0.5228787452803376 0.5 0.0 [{I|L}V]WV{I|L}VS{I|L}T 2.644 - 2059 1 0.977 160003.6 1.0 11454 5694 17133 HBL1_DMSO_200M_050219_1,17150 HBL1_DMSO_200M_050219_1,17150,YFQALVNNM True True YFQALVNNM 82.459655 550.266528308392 6130513.0 17133.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 6.4781174659729 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17151 82.462 130.0 1299300.0 25 0 191410.0 + 44452 YMQTICAGFA 10 154 552.7465908608268 1103.4786287884535 2 552.7461425662041 MULTI CID FTMS 0 0 0 17133 446430.71875 0.5386693225234843 -1 0.1470184326171875 18 Unmodified _YMQTICAGFA_ REV__ENSG00000277932|ENST00000610445|OR52E5 13.90604991867851 0.6142120002215601 3 {I|L}{M(Oxidation (M))|F}GDW 5 -1 46.456 0.0 0.0 4.21 0.0 0.0 467.1863761213058 0.0 467.1863761213058 0.0 27.62169475829881 0.0 0.0 0 1.6549471895720984 0.0 0.7510912013506126 0.0 {I|L}{M(Oxidation (M))|F}GDW 4.21 - 906 + 1 0.977 134222.9 1.0 11455 5694 17133 HBL1_DMSO_200M_050219_1,17151 HBL1_DMSO_200M_050219_1,17151,YMQTICAGFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17152 82.468 320.0 1039200.0 25 0 114800.0 -1 MLCRMFLL 8 217 542.2789150664369 1082.5432771996736 2 542.2781249880791 MULTI CID FTMS 0 0 0 17133 452625.40625 0.7719596308752876 -1 0.1470184326171875 19 Carbamidomethyl (C) _MLC(Carbamidomethyl (C))RMFLL_ nc|ENSG00000138448|P06756-3|ITGAV 28.17323086031832 0.4514957916281387 3 EEE{I|L}{I|L}GPPS{I|L} 10 -1 + 37.036 0.0 0.0 3.4212 3.4212 76.664 0.0 0.0 0.0 4.994142581944772 4.517215693497299 4.517215693497299 6.262874945799766 0 0.3252574989159953 0.0 0.7742275032520141 0.0 EEE{I|L}{I|L}GPPS{I|L};EEE{I|L}{I|L}GPPTV;{NN|[MP]|[D{I|L}]|[EV]}[DG][NP]Q{I|L}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DG][NP]QV{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}AVE[C(Carbamidomethyl (C))H]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]E[C(Carbamidomethyl (C))H]{I|L}{I|L};[Y{M(Oxidation (M))|F}][WD]Q{I|L}V{I|L};[{I|L}T]TPG{I|L}{I|L}E[HC];[{I|L}T]TPE[C(Carbamidomethyl (C))H]{I|L}{I|L};[TP]YYWQ{I|L}{I|L} 3.4212;2.8426;2.5087;2.3135;2.2742;2.2204;2.1265;2.1209;2.0761;2.069 -;-;-;-;-;-;-;-;-;- 2301 + 1 0.977 257380.1 1.0 11456 5694 17133 HBL1_DMSO_200M_050219_1,17152 HBL1_DMSO_200M_050219_1,17152,MLCRMFLL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17153 82.47 62.0 715890.0 25 0 239530.0 -1 HSLTMDLWI 9 71 386.527925848909 1156.561948146927 3 386.5279113650322 MULTI CID FTMS 0 0 0 17133 411682.78125 0.3589371078524918 -5 0.4370651245117187 20 Acetyl (Protein N-term) _(Acetyl (Protein N-term))HSLTMDLWI_ nc|ENSG00000077327|O75602-5|SPAG6 7.910154910731844 0.6385446671287552 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}{I|L} 5 -1 20.713 0.0 0.0 1.7909 0.0 0.0 0.0 564.2162809928833 564.2162809928833 5.228787452803374 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}{I|L} 1.7909 - 60 1 0.977 42301.0 1.0 11457 5694 17133 HBL1_DMSO_200M_050219_1,17153 HBL1_DMSO_200M_050219_1,17153,HSLTMDLWI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17155 82.477 296.0 785560.0 25 0 46145.0 23672 LTSDKMCSMV 10 191 557.7483692469219 1113.4821855606438 2 557.7489501833916 MULTI CID FTMS 0 0 0 17154 591797.625 0.5550913100964906 3 -0.2392196655273437 1 Unmodified _LTSDKMCSMV_ ENST00000389400.4_1_10:86320393-86320726:+|nuORF 25.399314129420983 0.3980215340001851 3 {[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}VR{I|L}E 8 8 46.787 0.0 0.0 4.2018 0.0 0.0 0.0 109.95265529440783 109.95265529440783 18.18837359785184 0.0 0.0 0.0 0 0.0 2.0 0.4086280037772751 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}VR{I|L}E 4.2018 - 4864 1 0.977 179507.4 1.0 11458 5695 17154 HBL1_DMSO_200M_050219_1,17155 HBL1_DMSO_200M_050219_1,17155,LTSDKMCSMV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17156 82.478 23.0 629440.0 25 0 83108.0 + 18834 LASLRREI 8 38 479.2938775960205 956.573202258841 2 479.2934448122978 MULTI CID FTMS 0 0 0 17154 2380792.5 0.741999821729992 -1 0.0470046997070312 2 Unmodified _LASLRREI_ REV__ENSG00000083290|ENST00000395544|ULK2;REV__ENSG00000177169|ENST00000321867|ULK1;REV__ENST00000540568.1_1_12:132405491-132405903:+|nuORF;REV__ENST00000540647.5_1_12:132402872-132405903:+|nuORF 2.889219685676258 0.8067950007271085 3 {I|L} 1 -1 12.474 0.0 0.0 1.3041 0.0 0.0 825.4780464744645 0.0 825.4780464744645 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3041 + + 2 + 1 0.977 19216.6 1.0 11459 5695 17154 HBL1_DMSO_200M_050219_1,17156 HBL1_DMSO_200M_050219_1,17156,LASLRREI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17157 82.479 30.0 1286200.0 25 0 134620.0 + -1 IMCKGEETL 9 72 540.7562643190413 1079.4979757048825 2 540.7563964724541 MULTI CID FTMS 0 0 0 17154 1700938.5 0.454018398286092 -4 0.3308486938476562 3 Carbamidomethyl (C) _IMC(Carbamidomethyl (C))KGEETL_ REV__ENST00000460911.5_1_7:148507430-148507493:-|nuORF 13.50788311687929 0.4710407108020397 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[CS]D{[QG]|[NA]}{I|L}T{I|L} 10 -1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[CS]D{[QG]|[NA]}{I|L} + + 21.211 6.6991 0.79059 1.9649 1.9649 48.801 0.0 0.0 0.0 0.0 6.506375246153906 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[CS]D{[QG]|[NA]}{I|L}T{I|L} 1.9649 - 79 + 1 0.977 36734.9 1.0 11460 5695 17154 HBL1_DMSO_200M_050219_1,17157 HBL1_DMSO_200M_050219_1,17157,IMCKGEETL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17158 82.484 267.0 569150.0 25 0 130770.0 -1 0 61 1126.83310852255 3377.4774961678504 3 1127.503344714642 MULTI CID FTMS 0 0 0 17154 883046.375 0.9784131620129156 -1 0.0470046997070312 4 3 VTE{M(Oxidation (M))|F}YGA[WH] 9 -1 43.906 0.0 0.0 1.3 0.0 0.0 2268.976411133044 0.0 2268.976411133044 0.0 32.47933455448525 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 VTE{M(Oxidation (M))|F}YGA[WH] 1.3 - 215 + 1 0.977 116186.8 1.0 11461 5695 17154 HBL1_DMSO_200M_050219_1,17158 HBL1_DMSO_200M_050219_1,17158, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17159 82.489 273.0 898970.0 25 0 100340.0 + 23249 LSVEIVHEL 9 192 519.7947715305413 1037.5749901278823 2 519.7942993044853 MULTI CID FTMS 0 0 0 17154 759043.625 0.9580683788314714 -1 0.0470046997070312 5 Unmodified _LSVEIVHEL_ ENSG00000137200|ENST00000373451|CMTR1 68.08070601005525 0.0218408846571049 3 {I|L}SVE{I|L}VY 7 3 62.072 0.0 0.0 5.9824 0.0 0.0 0.0 231.11512170963127 231.11512170963127 24.42504095246872 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.7302046884880937 0.0 {I|L}SVE{I|L}VY 5.9824 - 3564 + 1 0.977 191080.4 1.0 11462 5695 17154 HBL1_DMSO_200M_050219_1,17159 HBL1_DMSO_200M_050219_1,17159,LSVEIVHEL True True LSVEIVHEL 82.489371 519.794299304485 7787887.5 17154.0 ENSG00000137200|ENST00000373451|CMTR1 5.116179943084717 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17160 82.495 339.0 603480.0 25 0 42790.0 + 10578 FVIRIRGINGV 11 151 415.2584828080327 1242.753619024298 3 415.2591125369072 MULTI CID FTMS 0 0 0 17154 655496.6875 1.0 0 0.0 6 Unmodified _FVIRIRGINGV_ ENSG00000147604|ENST00000352983|RPL7;ENST00000520308.1_1_5:165456004-165456130:-|nuORF 57.10758569107544 0.0808838796364293 3 EV 2 10 21.766 0.0 0.0 1.7514 0.0 0.0 996.6206950020876 0.0 996.6206950020876 0.0 5.568109453757653 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 EV 1.7514 - 112 1 0.977 162008.8 1.0 11463 5695 17154 HBL1_DMSO_200M_050219_1,17160 HBL1_DMSO_200M_050219_1,17160,FVIRIRGINGV True True FVIRIRGINGV 82.495499 415.259112536907 3365534.75 17154.0 ENST00000520308.1_1_5:165456004-165456130:-|nuORF;;ENSG00000147604|ENST00000352983|RPL7 7.257487456003825 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17161 82.498 94.0 695470.0 25 0 103440.0 + 12683 GVLPNIQAV 9 86 455.7712203434208 909.5278877536416 2 455.7710143923759 MULTI CID FTMS 0 0 0 17154 665171.1875 0.0100941808366149 23 -1.4727630615234375 7 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 38.15118350030904 0.0856056900103839 3 [VG]APQA 6 4 31.018 0.0 0.0 3.4103 0.0 0.0 0.0 383.22781386131663 383.22781386131663 13.287775812132455 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.3807196863200844 [VG]APQA 3.4103 - 614 1 0.977 55347.8 1.0 11464 5695 17154 HBL1_DMSO_200M_050219_1,17161 HBL1_DMSO_200M_050219_1,17161,GVLPNIQAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17162 82.503 317.0 554970.0 25 0 75813.0 + 16299 IWPNARISVM 10 149 593.8225332703377 1185.6305136074752 2 593.8234130740166 MULTI CID FTMS 0 0 0 17154 482157.15625 0.4086634745648056 -5 0.4036331176757812 8 Unmodified _IWPNARISVM_ ENSG00000131844|ENST00000340941|MCCC2;nc|ENSG00000131844|Q9HCC0-2|MCCC2 29.081581746732265 0.3152867722954398 3 [W{I|L}]PN 4 6 42.307 0.0 0.0 3.5683 0.0 0.0 0.0 672.3509005182249 672.3509005182249 19.146518864155123 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + [W{I|L}]PN 3.5683 + + 674 + 1 0.977 133248.6 1.0 11465 5695 17154 HBL1_DMSO_200M_050219_1,17162 HBL1_DMSO_200M_050219_1,17162,IWPNARISVM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17163 82.509 324.0 236950.0 25 0 8755.5 -1 0 106 646.1205391980918 2580.453050925967 4 646.3710204958916 MULTI CID FTMS 0 0 0 17154 446267.90625 1.0 0 0.0 9 3 [{I|L}T]{I|L}{M(Oxidation (M))|F}[DG]WETV 10 -1 41.374 0.0 0.0 1.6034 0.0 0.0 0.0 1415.872825666455 1415.872825666455 29.695765116761137 0.0 0.0 0.0 0 0.5 0.958607314841775 0.6109243748081782 0.0 [{I|L}T]{I|L}{M(Oxidation (M))|F}[DG]WETV 1.6034 - 444 1 0.977 62485.1 1.0 11466 5695 17154 HBL1_DMSO_200M_050219_1,17163 HBL1_DMSO_200M_050219_1,17163, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17164 82.511 100.0 759400.0 25 0 109380.0 + 45725 YYFEGIKQTF 10 89 648.3189746059611 1294.623396278722 2 648.3177368044853 MULTI CID FTMS 0 0 0 17154 418479.0 0.339038197182277 -1 0.0470046997070312 10 Unmodified _YYFEGIKQTF_ ENSG00000100591|ENST00000216479|AHSA1;ENST00000556369.1_3_14:77935388-77935589:+|nuORF 93.16586880292088 0.0091067182461363 3 YY{M(Oxidation (M))|F}E{[VA]|[{I|L}G]}KQT{M(Oxidation (M))|F} 10 0 + 95.954 0.0 0.0 7.4117 7.4117 91.43 0.0 0.0 0.0 63.636218907515314 13.521825181113629 13.521825181113629 9.164539485499262 0 1.8494850021680087 2.0 2.2856668758921828 0.4247425010840047 + + YY{M(Oxidation (M))|F}E{[VA]|[{I|L}G]}KQT{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}E{[VA]|[{I|L}G]}K[AG]T{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}[W{I|L}]KQT{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}[W{I|L}]K[AG]T{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}RRDQT{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}KQ{[ET]|[MV]};YY{M(Oxidation (M))|F}{M(Oxidation (M))|F}[KQ]{[WT]|[RM]}{I|L};YY{M(Oxidation (M))|F}{M(Oxidation (M))|F}[KQ]{[VA]|[{I|L}G]}{[ET]|[MV]};YY{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}K[NP]{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}K[AG]{[ET]|[MV]} 7.4117;6.7038;6.6559;5.9446;4.2307;4.1213;4.0301;3.8355;3.5077;3.4134 +;-;-;-;-;-;-;-;-;- + 800 + 1 0.977 60710.4 1.0 11467 5695 17154 HBL1_DMSO_200M_050219_1,17164 HBL1_DMSO_200M_050219_1,17164,YYFEGIKQTF True True YYFEGIKQTF 82.511398 648.317736804485 20054152.0 17154.0 ENST00000556369.1_3_14:77935388-77935589:+|nuORF;;ENSG00000100591|ENST00000216479|AHSA1 7.863244851430257 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17165 82.517 335.0 744600.0 25 0 88586.0 + -1 EEEEEGLGLMP 11 162 624.7674961874279 1247.5204394416558 2 624.7687866091728 MULTI CID FTMS 0 0 0 17154 429446.90625 0.1446948036266449 -3 0.2447738647460937 11 Oxidation (M) _EEEEEGLGLM(Oxidation (M))P_ REV__ENSG00000198835|ENST00000366714|GJC2 18.1463463914782 0.6576820063886638 3 {[DA]|[EG]}DA[SG]{I|L}WW{NN|[MP]|[D{I|L}]|[EV]} 11 -1 + 35.688 0.0 0.0 2.8607 2.8607 75.568 0.0 0.0 0.0 5.0090427329294265 -4.203003984845104 -4.203003984845104 6.3077482676582655 0 1.3226825097560422 0.6777807052660807 1.3243923658886183 0.0 {[DA]|[EG]}DA[SG]{I|L}WW{NN|[MP]|[D{I|L}]|[EV]};{[DA]|[EG]}D{[QS]|[NT]}{I|L}WW{NN|[MP]|[D{I|L}]|[EV]};{[DA]|[EG]}EG[SG]{I|L}WW{NN|[MP]|[D{I|L}]|[EV]};{[DA]|[EG]}E[NS]{I|L}WW{NN|[MP]|[D{I|L}]|[EV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GA[SG]{I|L}WW{NN|[MP]|[D{I|L}]|[EV]};{[DA]|[EG]}DA[MT]CY{I|L}[{M(Oxidation (M))|F}V];[MT]YC(Carbamidomethyl (C))EDA{I|L}[{M(Oxidation (M))|F}V];{[DA]|[EG]}DA[MT][NP]W{NN|[MP]|[D{I|L}]|[EV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[SG]{I|L}WW{NN|[MP]|[D{I|L}]|[EV]};[MT]YCGEDA{I|L}[{M(Oxidation (M))|F}V] 2.8607;2.3551;2.3371;1.8315;1.7571;1.7306;1.6075;1.5609;1.4713;1.4571 -;-;-;-;-;-;-;-;-;- 3371 1 0.977 185681.4 1.0 11468 5695 17154 HBL1_DMSO_200M_050219_1,17165 HBL1_DMSO_200M_050219_1,17165,EEEEEGLGLMP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17166 82.52 106.0 629020.0 25 0 73014.0 + 35120 SQYEEQFVTL 10 97 622.2958720100562 1242.5771910869123 2 622.2951537966728 MULTI CID FTMS 0 0 0 17154 359990.75 0.2087641893525353 -4 0.3308486938476562 12 Unmodified _SQYEEQFVTL_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF 61.60191391372663 0.0323840705564037 3 {M(Oxidation (M))|F}QEEC(Carbamidomethyl (C))S{I|L} 7 6 50.953 0.0 0.0 4.1006 0.0 0.0 331.2114208613463 0.0 331.2114208613463 0.0 30.23927702107983 0.0 0.0 0 0.0 0.0 1.892159058960253 0.3807196863200844 {M(Oxidation (M))|F}QEEC(Carbamidomethyl (C))S{I|L} 4.1006 - 675 + 1 0.977 52038.2 1.0 11469 5695 17154 HBL1_DMSO_200M_050219_1,17166 HBL1_DMSO_200M_050219_1,17166,SQYEEQFVTL True True SQYEEQFVTL 82.51975 622.295153796673 34785168.0 17154.0 ENST00000428210.5_1_2:61720980-61752425:-|nuORF;;ENSG00000082898|ENST00000401558|XPO1 7.5508653322855634 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17167 82.528 365.0 357140.0 25 0 23560.0 + 25659 NFYGDLRKAL 10 153 598.8257811299208 1195.6370093266414 2 599.3277465701103 MULTI CID FTMS 0 0 0 17154 341426.21875 1.0 0 0.0 13 Unmodified _NFYGDLRKAL_ ENSG00000164211|ENST00000296632|STARD4 35.079672537005266 0.2095246155385646 3 N{M(Oxidation (M))|F}YGD{I|L}[RK]A{I|L} 10 0 + 43.626 0.0 0.0 3.6487 3.6487 82.135 0.0 0.0 0.0 21.574805931304866 7.658715643802765 7.658715643802765 13.241537945111189 0 0.9247425010840048 0.0 0.0 0.3054621874040891 + + N{M(Oxidation (M))|F}YGD{I|L}[RK]A{I|L};N{M(Oxidation (M))|F}Y{[RE]|[WV]}[RK]A{I|L};[KA]{I|L}KVWH[WE];RR{I|L}[MN][WH]A{I|L};[KA]{I|L}{I|L}[MN][YK]C{I|L} 3.6487;2.5413;0.90264;0.26209;0.1892 +;-;-;-;- + 804 + 1 0.977 99394.9 1.0 11470 5695 17154 HBL1_DMSO_200M_050219_1,17167 HBL1_DMSO_200M_050219_1,17167,NFYGDLRKAL False True NFYGDLRKAL 82.527507 599.32774657011 3891718.75 17154.0 ENSG00000164211|ENST00000296632|STARD4 4.710272471110026 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17168 82.535 430.0 572830.0 25 0 75208.0 + 22387 YPLDGEKILHI 11 175 433.2603463353176 0 433.2432433962822 PEAK CID FTMS 0 0 0 17154 144358.984375 1.0 0 0.0 14 Unmodified _LPSSVLHI_ ENSG00000131966|ENST00000254286|ACTR10;ENST00000557583.1_1_14:58690362-58697140:+|nuORF 24.20995872069341 0.3384027523972496 3 AV{I|L}VH 5 6 13.95 0.0 0.0 1.6136 0.0 0.0 214.08360663372252 128.07219873599846 342.15580536972107 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 AV{I|L}VH 1.6136 - 217 + 1 0.977 204276.2 1.0 11471 5695 17154 HBL1_DMSO_200M_050219_1,17168 HBL1_DMSO_200M_050219_1,17168,LPSSVLHI False False YPLDGEKILHI 82.535155 433.243243396282 3348324.25 17154.0 ENSG00000131966|ENST00000254286|ACTR10;;ENST00000557583.1_1_14:58690362-58697140:+|nuORF 5.065105120340983 3.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17169 82.542 395.0 477460.0 25 0 31152.0 + 35588 STTVTLFKV 9 190 498.2931144968455 994.571676060491 2 498.2927734255791 MULTI CID FTMS 0 0 0 17154 313438.96875 0.035196767325066 11 -0.9175796508789062 15 Unmodified _STTVTLFKV_ nc|ENSG00000211899|P01871|IGHM 47.74868867922204 0.0453060283459952 3 {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV 9 0 + 41.0 0.0 0.0 4.1224 4.1224 84.008 0.0 0.0 0.0 11.70364358414254 13.459924024478129 11.70364358414254 16.409780573583312 0 0.3494850021680094 0.0 0.4247425010840047 0.25 + + {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV;{[MG]|[TS]}T{I|L}{I|L}S{M(Oxidation (M))|F}KV;[HA]P[PS]{I|L}{M(Oxidation (M))|F}KV;[HA]P[{I|L}P]S{M(Oxidation (M))|F}KV;{[MG]|[TS]}TV[{I|L}P]{I|L}[PA]P;{[MG]|[TS]}TV[{I|L}P]AP{I|L}P;{[MG]|[TS]}TV[{I|L}P]APP{I|L};[VG]DV[VP][PS]{I|L}{I|L};[{M(Oxidation (M))|F}V][R{I|L}]S{M(Oxidation (M))|F}KV;{[TV]|[{I|L}S]}T[HK][PS]{I|L}{I|L} 4.1224;2.4725;1.7613;1.694;1.6193;1.5923;1.3693;1.0113;0.96307;0.47235 +;-;-;-;-;-;-;-;-;- + 1068 + 1 0.977 141796.2 1.0 11472 5695 17154 HBL1_DMSO_200M_050219_1,17169 HBL1_DMSO_200M_050219_1,17169,STTVTLFKV True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17170 82.551 503.0 321260.0 25 0 35846.0 + 35737 SVIDHIHLI 9 187 349.53820907982254 1045.5927978396676 3 349.5377685427666 MULTI CID FTMS 0 0 0 17154 267798.3125 0.1837949784294335 6 -0.4534912109375 16 Unmodified _SVIDHIHLI_ ENSG00000123159|ENST00000393033|GIPC1;nc|ENSG00000123159|O14908-2|GIPC1 46.92087301778293 0.0471210510596396 3 [VS]{I|L}DH{I|L}H{I|L}{I|L} 9 0 + 56.002 0.0 0.0 5.356 5.356 86.827 0.0 0.0 0.0 20.35335007137462 12.06153761089837 12.06153761089837 10.74031267727718 0 0.3494850021680094 2.0 0.4247425010840047 0.0 + + [VS]{I|L}DH{I|L}H{I|L}{I|L};[VS]{I|L}{I|L}[HD]H{I|L}{I|L};[VS]{I|L}DH{I|L}{I|L}{I|L}H;[VS]{I|L}{I|L}Q{[WT]|[RM]}S{I|L};[VS][YR]Q{I|L}{I|L}[PA];[VS]{I|L}{I|L}[AG]{[WT]|[RM]}S{I|L};[VS]{I|L}{I|L}[HD]{I|L}{I|L}H;[VS][YR][AG]{I|L}{I|L}[PA];[VS][WK][{M(Oxidation (M))|F}V]{I|L}[PA];W{I|L}[{M(Oxidation (M))|F}V]QQ{I|L}{I|L} 5.356;4.3288;3.4609;3.4318;3.1139;2.5512;2.4337;2.2332;1.8745;1.6562 +;-;-;-;-;-;-;-;-;- + 937 + 1 0.977 135774.0 1.0 11473 5695 17154 HBL1_DMSO_200M_050219_1,17170 HBL1_DMSO_200M_050219_1,17170,SVIDHIHLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17171 82.56 511.0 475340.0 25 0 44951.0 -1 0 209 336.1045918213961 670.1946307095923 2 336.1044799685478 MULTI CID FTMS 0 0 0 17154 262663.875 0.0775082452362353 11 -0.9175796508789062 17 3 S 1 -1 8.6092 0.0 0.0 1.2846 0.0 0.0 183.03392284085191 397.0999544733032 580.1338773141551 0.0 0.0 0.0 0.0 0 0.4005149978319906 0.0 0.0 0.0 S 1.2846 - 51 + 1 0.977 190534.2 1.0 11474 5695 17154 HBL1_DMSO_200M_050219_1,17171 HBL1_DMSO_200M_050219_1,17171, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17172 82.568 350.0 929140.0 25 0 98697.0 + + -1 LADAVISV 8 136 787.8667089829028 1573.7188650326054 2 787.8694335818291 MULTI CID FTMS 0 0 0 17154 257485.890625 0.8393557693336179 -1 0.0470046997070312 18 Carbamidomethyl (C),Oxidation (M) _QHYFKM(Oxidation (M))FWC(Carbamidomethyl (C))LV_ Q2KJ83 3.2813086475875832 0.8596665074481906 3 {NN|[MP]|[D{I|L}]|[EV]}G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]QNA{M(Oxidation (M))|F}YQ[{I|L}V] 13 -1 + 60.157 0.0 0.0 3.8226 3.8226 72.341 0.0 0.0 0.0 2.108533653148932 7.513580737957071 2.108533653148932 2.108533653148932 0 0.3807196863200844 1.6989700043360187 0.3054621874040891 1.1861818737241734 {NN|[MP]|[D{I|L}]|[EV]}G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]QNA{M(Oxidation (M))|F}YQ[{I|L}V];{[VA]|[{I|L}G]}D[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]QNA{M(Oxidation (M))|F}YQ[{I|L}V];[TP]S[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]QNA{M(Oxidation (M))|F}YQ[{I|L}V];{[DA]|[EG]}V[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]QNA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ][WD]QNA{M(Oxidation (M))|F}YQ[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]QGGA{M(Oxidation (M))|F}YQ[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]QNA{M(Oxidation (M))|F}Y[AG][{I|L}V];{[DA]|[EG]}{[YD]|[{M(Oxidation (M))|F}M]}QQNA{M(Oxidation (M))|F}YQ[{I|L}V];{[VA]|[{I|L}G]}D[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][AG]NA{M(Oxidation (M))|F}YQ[{I|L}V] 3.8226;3.6886;3.5814;3.4153;3.339;3.2461;3.2461;3.2461;3.224;3.1121 -;-;-;-;-;-;-;-;-;- 13423 1 0.977 222418.2 1.0 11475 5695 17154 HBL1_DMSO_200M_050219_1,17172 HBL1_DMSO_200M_050219_1,17172,QHYFKMFWCLV False False LADAVISV 82.567596 787.869433581829 13267906.0 17154.0 Q2KJ83 3.0371565024058023 1.0 False 8.0 True unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17173 82.576 476.0 350620.0 25 0 56441.0 + 34215 SLPIQQAL 8 179 435.2584796211502 868.5024063091004 2 435.2585021853447 MULTI CID FTMS 0 0 0 17154 252136.75 0.9843387270377671 2 -0.1706390380859375 19 Unmodified _SLPIQQAL_ REV__ENSG00000102804|ENST00000458659|TSC22D1;REV__nc|ENSG00000102804|Q15714-3|TSC22D1 13.50788311687929 0.7113601687236069 3 [{I|L}P]SH 4 -1 18.627 0.0 0.0 2.1447 0.0 0.0 0.0 431.25464262863073 431.25464262863073 3.0887748992724067 0.0 0.0 0.0 0 0.0 0.721246399047171 0.4247425010840047 0.0 [{I|L}P]SH 2.1447 - 221 1 0.977 131033.8 1.0 11476 5695 17154 HBL1_DMSO_200M_050219_1,17173 HBL1_DMSO_200M_050219_1,17173,SLPIQQAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17174 82.586 553.0 357040.0 25 0 59871.0 -1 DALLPILL 8 161 303.86064273765334 908.56009881316 3 303.8604003787041 MULTI CID FTMS 0 0 0 17154 249776.0625 0.4335268524287988 4 -0.3038558959960937 20 Acetyl (Protein N-term) _(Acetyl (Protein N-term))DALLPILL_ ENST00000356731.9_1_5:179051529-179051574:-|nuORF 0.7936320650641473 0.8195151834710337 3 {I|L} 1 -1 13.495 0.0 0.0 1.4853 0.0 0.0 777.4649277699945 0.0 777.4649277699945 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4853 + + 62 + 1 0.977 159388.1 1.0 11477 5695 17154 HBL1_DMSO_200M_050219_1,17174 HBL1_DMSO_200M_050219_1,17174,DALLPILL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17176 82.59 1.4 29929000.0 25 0 5997800.0 + 15564 IPYHIVNIV 9 70 534.3160850614504 1066.6176171897007 2 534.3164550662041 MULTI CID FTMS 0 0 0 17175 33628772.0 0.5809955313367918 4 -0.2843017578125 1 Unmodified _IPYHIVNIV_ ENSG00000031698|ENST00000234677|SARS1 34.18733598223924 0.1073653526364521 3 {[QV]|[N{I|L}]|[RA]|[KV]}WPVN{I|L}{I|L}V 9 5 + 54.67 0.0 0.0 5.1256 5.1256 75.661 0.0 0.0 0.0 16.532125137753432 9.889917747712644 9.889917747712644 1.7609125905568137 0 0.6989700043360187 2.0 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}WPVN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}WPV{I|L}N{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}WP{I|L}VN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}WPVGG{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}WPV{I|L}GG{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}WP{I|L}VGG{I|L}V;[{I|L}P]{[WN]|[YH]}VN{I|L}{I|L}V;[{I|L}P]{[WN]|[YH]}V{I|L}N{I|L}V;GG{I|L}WPVN{I|L}{I|L}V;GG[WP]{I|L}VN{I|L}{I|L}V 5.1256;4.9605;4.6783;4.2623;4.0972;3.815;3.5756;3.4105;3.2934;3.2653 -;-;-;-;-;-;-;-;-;- 223 1 0.973 38726.1 1.0 11478 5696 17175 HBL1_DMSO_200M_050219_1,17176 HBL1_DMSO_200M_050219_1,17176,IPYHIVNIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17177 82.591 3.9 16553000.0 25 0 2872300.0 + 9899 FPFYGKPMRI 10 53 419.2266611861339 1254.6581541586015 3 419.2267944216728 MULTI CID FTMS 0 0 0 17175 11056609.0 0.9083259889166672 4 -0.2843017578125 2 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 27.628801355627647 0.3479284626772844 3 PW{I|L}[KG]Y{M(Oxidation (M))|F}PE 9 6 51.872 0.0 0.0 4.1344 0.0 0.0 119.07401473213046 0.0 119.07401473213046 0.0 29.65350013324773 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}[KG]Y{M(Oxidation (M))|F}PE 4.1344 - 220 1 0.973 57802.2 1.0 11479 5696 17175 HBL1_DMSO_200M_050219_1,17177 HBL1_DMSO_200M_050219_1,17177,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17178 82.592 5.6 8947400.0 25 0 1007100.0 + 12710 GVLSSDGVWRV 11 60 587.814718111146 0 587.8146850466728 PEAK CID FTMS 0 0 0 17175 10073744.0 1.0 0 0.0 3 Unmodified _GVLSSDGVWRV_ ENSG00000125459|ENST00000245564|MSTO1;ENST00000483734.5_1_1:155580745-155584061:+|nuORF;nc|ENSG00000125459|Q9BUK6-2|MSTO1;nc|ENSG00000125459|Q9BUK6-3|MSTO1 30.7034409873982 0.2208360222321843 3 {I|L}SSDRW 6 6 49.826 0.0 0.0 4.2455 0.0 0.0 156.08824978184015 270.1580904596313 426.2463402414714 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.3807196863200844 {I|L}SSDRW 4.2455 - 155 + 1 0.973 43170.8 1.0 11480 5696 17175 HBL1_DMSO_200M_050219_1,17178 HBL1_DMSO_200M_050219_1,17178,GVLSSDGVWRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17179 82.593 8.8 4694500.0 25 0 635940.0 + 4611 DAYTVLTRI 9 68 526.2927680362789 1050.5709831393576 2 526.2929565310478 MULTI CID FTMS 0 0 0 17175 4324576.0 0.1022010763809227 -4 0.3607635498046875 4 Unmodified _DAYTVLTRI_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 28.49450938151212 0.1686335738423394 3 {[DA]|[EG]}YTV{I|L} 6 3 55.138 0.0 0.0 5.2484 0.0 0.0 0.0 385.2203407533073 385.2203407533073 36.97743773147742 0.0 0.0 0.0 0 1.274227503252014 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YTV{I|L} 5.2484 + + 98 + 1 0.973 39830.9 1.0 11481 5696 17175 HBL1_DMSO_200M_050219_1,17179 HBL1_DMSO_200M_050219_1,17179,DAYTVLTRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17180 82.595 11.0 5303400.0 25 0 436040.0 + 41232 VPFSVPKI 8 69 443.7726483262453 885.5307437192906 2 443.7717162966728 MULTI CID FTMS 0 0 0 17175 3114921.25 0.9674792947596472 1 -0.0546493530273437 5 Unmodified _VPFSVPKI_ ENSG00000068079|ENST00000415816|IFI35;ENST00000246911.6_1_17:41158964-41165399:+|nuORF;nc|ENSG00000068079|P80217-2|IFI35 36.12702656103203 0.299085846329477 3 VP{M(Oxidation (M))|F}SVPK{I|L} 8 0 + 68.586 0.0 0.0 7.7452 7.7452 96.65 0.0 0.0 0.0 47.41557245940342 13.443350238481033 13.443350238481033 42.42320262106496 0 0.805462187404089 1.2218487496163564 0.0 0.0 + + VP{M(Oxidation (M))|F}SVPK{I|L};VHHRPK{I|L} 7.7452;2.9545 +;- + 175 + 1 0.973 49572.9 1.0 11482 5696 17175 HBL1_DMSO_200M_050219_1,17180 HBL1_DMSO_200M_050219_1,17180,VPFSVPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17181 82.596 19.0 3000200.0 25 0 440370.0 + 1712 ALPLTEGSH 9 70 462.7438414389623 923.4731299447244 2 462.7437316775322 MULTI CID FTMS 0 0 0 17175 2097847.75 0.4410730985594491 10 -0.8015899658203125 6 Unmodified _ALPLTEGSH_ REV__ENSG00000183117|ENST00000635120|CSMD1;REV__ENST00000523387.5_1_8:2986336-3141840:-|nuORF;REV__ENST00000523488.5_1_8:3008913-3253839:-|nuORF;REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-3|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-4|CSMD1 11.640296217721598 0.521594087909532 3 [{I|L}A]P{I|L} 4 -1 38.94 0.0 0.0 4.2167 0.0 0.0 0.0 526.1886080377561 526.1886080377561 27.68110275043508 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.2167 + + 34 + 1 0.973 51746.7 1.0 11483 5696 17175 HBL1_DMSO_200M_050219_1,17181 HBL1_DMSO_200M_050219_1,17181,ALPLTEGSH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17182 82.597 32.0 1936200.0 25 0 216320.0 + 22530 LPWGDPSQI 9 91 506.7588853228567 1011.5032177125132 2 506.7588989138603 MULTI CID FTMS 0 0 0 17175 1619628.75 0.422760136692454 4 -0.2843017578125 7 Unmodified _LPWGDPSQI_ ENSG00000134758|ENST00000261593|RNF138;ENST00000502765.1_1_5:54825986-54826487:-|nuORF;nc|ENSG00000134758|Q8WVD3-2|RNF138 28.486842064014134 0.1687311288560894 3 P{I|L}[PS]Q{I|L} 6 4 30.111 0.0 0.0 2.9769 0.0 0.0 358.1276722638688 0.0 358.1276722638688 0.0 17.04365036222725 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.5 P{I|L}[PS]Q{I|L} 2.9769 - 205 1 0.973 56893.6 1.0 11484 5696 17175 HBL1_DMSO_200M_050219_1,17182 HBL1_DMSO_200M_050219_1,17182,LPWGDPSQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17183 82.598 36.0 1100000.0 25 0 80841.0 + 13182 HGFAGYFETV 10 59 564.2611829272739 1126.5078129213475 2 564.2617065310478 MULTI CID FTMS 0 0 0 17175 1547751.5 0.5794700629264006 1 -0.0546493530273437 8 Unmodified _HGFAGYFETV_ ENSG00000100462|ENST00000324366|PRMT5;ENST00000557758.1_1_14:23391634-23392032:-|nuORF;nc|ENSG00000100462|O14744-2|PRMT5;nc|ENSG00000100462|O14744-3|PRMT5;nc|ENSG00000100462|O14744-4|PRMT5;nc|ENSG00000100462|O14744-5|PRMT5 44.40701690623563 0.1129771813061863 3 [{M(Oxidation (M))|F}V]T{M(Oxidation (M))|F}YGA{M(Oxidation (M))|F} 8 8 51.631 0.0 0.0 4.5833 0.0 0.0 0.0 191.05799280338127 191.05799280338127 26.62585341864037 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]T{M(Oxidation (M))|F}YGA{M(Oxidation (M))|F} 4.5833 - 190 + 1 0.973 36816.6 1.0 11485 5696 17175 HBL1_DMSO_200M_050219_1,17183 HBL1_DMSO_200M_050219_1,17183,HGFAGYFETV True True HGFAGYFETV 82.598054 564.261706531048 37545936.0 17175.0 nc|ENSG00000100462|O14744-5|PRMT5;;nc|ENSG00000100462|O14744-2|PRMT5;;ENSG00000100462|ENST00000324366|PRMT5;;ENST00000557758.1_1_14:23391634-23392032:-|nuORF;;nc|ENSG00000100462|O14744-4|PRMT5;;nc|ENSG00000100462|O14744-3|PRMT5 9.590571403503418 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17184 82.601 166.0 1178300.0 25 0 51976.0 -1 0 149 881.907832465658 1761.801111998116 2 881.9121581912041 MULTI CID FTMS 0 0 0 -1 0 9 3 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 131.99 0.0 0.0 7.492 7.492 83.411 0.0 0.0 0.0 6.3209326395593735 15.92986265876425 6.3209326395593735 1.9382002601611248 0 1.274227503252014 1.3979400086720375 2.149649864804614 1.2786596949921218 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]AGAQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGADQA{M(Oxidation (M))|F}YQV{I|L};[QA]HDEAGAQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQDQA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGA[AG]DA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}Y[AG]V{I|L};[QA]HDEAQQDA{M(Oxidation (M))|F}YQV{I|L} 7.492;7.382;7.1332;7.1228;7.0261;7.0232;7.0128;6.9804;6.9804;6.916 -;-;-;-;-;-;-;-;-;- 92636 1 0.973 132290.1 1.0 11486 5696 17175 HBL1_DMSO_200M_050219_1,17184 HBL1_DMSO_200M_050219_1,17184, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17185 82.603 46.0 1261300.0 25 0 220950.0 -1 IASVCYLD 8 61 470.7265013201815 939.438449707163 2 470.7264282107353 MULTI CID FTMS 0 0 0 17175 1051847.125 0.2607580336209835 10 -0.8015899658203125 10 Carbamidomethyl (C) _IASVC(Carbamidomethyl (C))YLD_ ENST00000373479.8_1_6:37321761-37321914:+|nuORF 19.438996006549623 0.6237395211498085 3 {I|L}A 2 -1 39.949 0.0 0.0 4.2524 0.0 0.0 0.0 752.2959071002908 752.2959071002908 32.95880017344075 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}A 4.2524 + + 12 + 1 0.973 48988.9 1.0 11487 5696 17175 HBL1_DMSO_200M_050219_1,17185 HBL1_DMSO_200M_050219_1,17185,IASVCYLD False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17186 82.607 216.0 1086200.0 25 0 88127.0 28465 PTFYTYEEGL 10 167 610.2798288899364 1218.5451048466728 2 610.2787353396416 MULTI CID FTMS 0 0 0 17175 954689.6875 0.7776777815701327 1 -0.0546493530273437 11 Unmodified _PTFYTYEEGL_ ENSG00000074201|ENST00000525428|CLNS1A 32.30548876998284 0.2428506522065767 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TTYGEE{I|L} 10 4 + 79.467 0.0 0.0 6.5215 6.5215 78.628 0.0 0.0 0.0 7.776676254393436 16.53212513775344 7.776676254393436 0.774713899150484 0 0.7742275032520141 1.3979400086720375 2.341129063296272 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TTYGEE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TTGEYE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TTGYEE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TTGEEY{I|L};{[QN]|[E{I|L}]|[KN]}HETYGEE{I|L};{[QN]|[E{I|L}]|[KN]}HETGEYE{I|L};{[QN]|[E{I|L}]|[KN]}HETGYEE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}T[{M(Oxidation (M))|F}V]W{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[ET]|[MV]}TG{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}HE[{M(Oxidation (M))|F}V]G{M(Oxidation (M))|F}E{I|L} 6.5215;6.4579;6.3257;6.0617;5.8833;5.8197;5.6875;5.6493;5.471;5.4447 -;-;-;-;-;-;-;-;-;- 13767 1 0.973 173516.5 1.0 11488 5696 17175 HBL1_DMSO_200M_050219_1,17186 HBL1_DMSO_200M_050219_1,17186,PTFYTYEEGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17187 82.608 41.0 936020.0 25 0 76556.0 + 45668 YVTEELPQL 9 71 546.2834702973372 1090.5523876614743 2 546.2816039919853 MULTI CID FTMS 0 0 0 17175 817737.0 0.2668198056695419 -5 0.44683837890625 12 Unmodified _YVTEELPQL_ ENSG00000139684|ENST00000378720|ESD 13.50788311687929 0.4710407108020397 3 {M(Oxidation (M))|F} 1 9 12.764 0.0 0.0 1.1704 0.0 0.0 925.472917912254 0.0 925.472917912254 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1704 - 39 + 1 0.973 40474.3 1.0 11489 5696 17175 HBL1_DMSO_200M_050219_1,17187 HBL1_DMSO_200M_050219_1,17187,YVTEELPQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17188 82.612 223.0 1063300.0 25 0 143110.0 + + 2882 DAIAVLSV 8 119 787.4553939612596 786.4481174946595 1 787.4546996951103 MULTI CID FTMS 0 0 0 17175 779788.0 0.4033286243983177 -3 0.3100128173828125 13 Unmodified _AVEAVSLV_ ENSG00000007080|ENST00000445755|CCDC124 81.86404211737425 0.0837039284849515 3 {[VA]|[{I|L}G]}EAV{I|L}SV 8 -1 + 74.605 0.0 0.0 9.4864 9.4864 85.189 0.0 0.0 0.0 1.461280356782396 16.409780573583333 1.461280356782396 1.461280356782396 0 1.0114393726401687 0.7695510786217261 1.263879331962458 0.0 {[VA]|[{I|L}G]}EAV{I|L}SV;[{I|L}A]DAV{I|L}SV;{[VA]|[{I|L}G]}EAVS{I|L}V;[{I|L}A]DAVS{I|L}V;[{I|L}A]ADV{I|L}SV;{[DA]|[EG]}{I|L}AV{I|L}SV;{[VA]|[{I|L}G]}EG{I|L}{I|L}SV;[{I|L}A]DG{I|L}{I|L}SV;[{I|L}A]ADVS{I|L}V;{[VA]|[{I|L}G]}EA{I|L}VSV 9.4864;9.3006;8.9519;8.7661;8.6939;8.5079;8.481;8.2952;8.1594;8.1337 -;-;+;-;-;-;-;-;-;- + 2115 1 0.973 162279.6 1.0 11490 5696 17175 HBL1_DMSO_200M_050219_1,17188 HBL1_DMSO_200M_050219_1,17188,AVEAVSLV False False DAIAVLSV 82.612098 787.45469969511 13267906.0 17175.0 ENSG00000007080|ENST00000445755|CCDC124 3.1687416235605874 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17189 82.614 114.0 1397100.0 25 0 271460.0 -1 ALLETYCA 8 87 314.15316800795216 0 314.1531555056572 PEAK CID FTMS 0 0 0 17175 688248.4375 0.2217387555522407 10 -0.8015899658203125 14 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 32.30548876998284 0.2094692153732555 3 A 1 -1 6.9897 0.0 0.0 1.116 0.0 0.0 470.1651178989137 82.06698785953358 552.2321057584472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.116 + + 5 + 1 0.973 132057.6 1.0 11491 5696 17175 HBL1_DMSO_200M_050219_1,17189 HBL1_DMSO_200M_050219_1,17189,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17190 82.619 262.0 310260.0 25 0 47613.0 + 8984 FASLFPLRKYR 11 112 699.4086727025749 1396.8027924719495 2 699.4072143435478 MULTI CID FTMS 0 0 0 17175 555932.5625 0.55438510043933 4 -0.2843017578125 15 Unmodified _FASLFPLRKYR_ REV__ENSG00000214717|ENST00000652001|ZBED1 9.38312468134398 0.8308777417566128 3 {I|L}SA 3 -1 20.177 0.0 0.0 1.4445 0.0 0.0 697.4420879815185 425.1835116022094 1122.625599583728 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {I|L}SA 1.4445 - 340 + 1 0.973 72137.3 1.0 11492 5696 17175 HBL1_DMSO_200M_050219_1,17190 HBL1_DMSO_200M_050219_1,17190,FASLFPLRKYR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17191 82.621 71.0 771530.0 25 0 64985.0 + 44685 YPFKPPMI 8 78 496.7673432328521 991.5201335325042 2 496.7683593630791 MULTI CID FTMS 0 0 0 17175 412478.8125 0.033110780998621 -12 0.9999008178710938 16 Unmodified _YPFKPPMI_ ENSG00000156587|ENST00000287156|UBE2L6 49.66892048692302 0.1408045912742846 3 YP{M(Oxidation (M))|F}KP 5 3 51.995 0.0 0.0 5.2439 0.0 0.0 0.0 356.16425501041255 356.16425501041255 4.599009323677095 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3807196863200844 + YP{M(Oxidation (M))|F}KP 5.2439 + + 274 + 1 0.973 47395.8 1.0 11493 5696 17175 HBL1_DMSO_200M_050219_1,17191 HBL1_DMSO_200M_050219_1,17191,YPFKPPMI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17192 82.627 303.0 188900.0 25 0 12300.0 -1 0 111 690.9726739414068 2069.8961924244204 3 691.3091918826103 MULTI CID FTMS 0 0 0 17175 378115.375 0.2277537293834335 4 -0.2843017578125 17 3 {[QN]|[E{I|L}]|[KN]}M 3 -1 23.161 0.0 0.0 1.1189 0.0 0.0 0.0 1693.7057987078767 1693.7057987078767 9.665762445130497 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5 0.0 {[QN]|[E{I|L}]|[KN]}M 1.1189 - 241 1 0.973 54374.0 1.0 11494 5696 17175 HBL1_DMSO_200M_050219_1,17192 HBL1_DMSO_200M_050219_1,17192, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17193 82.632 313.0 87203.0 25 0 7712.2 + -1 FFCFWFMGFI 10 64 722.3187133669853 0 722.3187133669853 PEAK CID FTMS 0 0 0 -1 0 18 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))FFC(Carbamidomethyl (C))FWFMGFI_ REV__ENST00000291295.13_1_19:47113748-47113955:+|nuORF 1.844237919475145 0.3961065659209837 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 0.973 27013.9 1.0 11495 5696 17175 HBL1_DMSO_200M_050219_1,17193 HBL1_DMSO_200M_050219_1,17193,FFCFWFMGFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17194 82.634 81.0 554050.0 25 0 48965.0 + 42434 VTFNVQKGL 9 83 503.2904806091085 1004.5664082850168 2 503.2915527224541 MULTI CID FTMS 0 0 0 17175 265066.0625 0.4142631392225828 -5 0.44683837890625 19 Unmodified _VTFNVQKGL_ REV__chr16:76309906-76316413|10|21.3|0.08|7.97|+|ENST00000478060|CNTNAP4,CNTNAP4;REV__ENSG00000152910|ENST00000611870|CNTNAP4;REV__nc|ENSG00000152910|Q9C0A0-2|CNTNAP4 8.593279151180031 0.6146971463335029 3 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 1.3434 0.0 0.0 839.4868469830623 0.0 839.4868469830623 0.0 -2.703037561203842 -2.703037561203842 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3434 + + 29 + 1 0.973 39052.5 1.0 11496 5696 17175 HBL1_DMSO_200M_050219_1,17194 HBL1_DMSO_200M_050219_1,17194,VTFNVQKGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17195 82.64 341.0 76857.0 25 0 10680.0 -1 0 51 1015.7234837354335 0 1015.72276610136 PEAK CID FTMS 0 0 0 17175 206674.65625 1.0 0 0.0 20 3 V 1 -1 6.9897 0.0 0.0 0.34442 0.0 0.0 1212.9835142464544 714.3471677843422 1927.3306820307969 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.34442 - 20 + 1 0.973 25780.3 1.0 11497 5696 17175 HBL1_DMSO_200M_050219_1,17195 HBL1_DMSO_200M_050219_1,17195, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17197 82.644 63.0 1642600.0 25 0 238310.0 + 31869 RTLDELGIHL 10 69 583.8303286798638 1165.6461044265277 2 583.8303710818291 MULTI CID FTMS 0 0 0 17196 1407260.125 0.3990425670225769 2 -0.1332168579101562 1 Unmodified _RTLDELGIHL_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 40.23920728925047 0.1550410903091231 3 E{I|L}G{I|L}H{I|L} 6 4 60.706 0.0 0.0 5.2079 0.0 0.0 485.2607351134885 0.0 485.2607351134885 0.0 33.53917193908117 0.0 0.0 0 1.6549471895720984 0.0 0.0 0.0 + E{I|L}G{I|L}H{I|L} 5.2079 + + 90 1 0.973 82154.5 1.0 11498 5697 17196 HBL1_DMSO_200M_050219_1,17197 HBL1_DMSO_200M_050219_1,17197,RTLDELGIHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17198 82.652 431.0 488940.0 25 0 51825.0 + 30431 RDEAPPEL 8 203 309.4904109860205 925.4494035582616 3 309.4899780154228 MULTI CID FTMS 0 0 0 17196 588380.0 0.4673133147819367 11 -0.86505126953125 2 Unmodified _RDEAPPEL_ REV__ENSG00000275832|ENST00000622683|ARHGAP23;REV__nc|ENSG00000275832|Q9P227-2|ARHGAP23 15.847184025352805 0.6768015514314958 3 {I|L}{M(Oxidation (M))|F} 2 -1 15.573 0.0 0.0 1.6828 0.0 0.0 647.3026660683167 0.0 647.3026660683167 0.0 0.9691001300805624 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.6828 - 274 1 0.973 167993.2 1.0 11499 5697 17196 HBL1_DMSO_200M_050219_1,17198 HBL1_DMSO_200M_050219_1,17198,RDEAPPEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17199 82.653 33.0 2884500.0 25 0 235370.0 + + 20398 RIVDKLLAL 9 97 520.8452490641548 1039.6759451951095 2 520.8453857302666 MULTI CID FTMS 0 0 0 17196 1182859.125 0.4219928425699856 -2 0.1706390380859375 3 Unmodified _LLGTARLIAI_ nc|ENSG00000111602|Q9UNS1-2|TIMELESS;ENST00000557589.1_1_12:56815125-56815341:-|nuORF;ENSG00000111602|ENST00000553532|TIMELESS 26.268140514670165 0.3785003716575977 3 {I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}{I|L}A{I|L} 9 -1 + 51.889 0.0 0.0 4.9909 4.9909 74.023 0.0 0.0 0.0 1.020599913279625 14.973024840566469 1.020599913279625 1.020599913279625 0 0.8807196863200843 1.3979400086720375 0.5 0.0 {I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}{I|L}A{I|L};[{I|L}A][W{I|L}]K{I|L}{I|L}A{I|L};{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}A{I|L}{I|L};[{I|L}A][W{I|L}]K{I|L}A{I|L}{I|L};[{I|L}A][W{I|L}]KA{I|L}{I|L}{I|L};{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KA{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]K{I|L}{I|L}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]K{I|L}A{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]KA{I|L}{I|L}{I|L} 4.9909;4.8927;4.2966;4.1984;3.9089;3.5262;3.2806;2.5863;1.8159 -;-;-;-;-;-;-;-;- 253 1 0.973 80395.0 1.0 11500 5697 17196 HBL1_DMSO_200M_050219_1,17199 HBL1_DMSO_200M_050219_1,17199,LLGTARLIAI False False RIVDKLLAL 82.653302 520.845385730267 22007008.0 17196.0 nc|ENSG00000111602|Q9UNS1-2|TIMELESS;;ENST00000557589.1_1_12:56815125-56815341:-|nuORF;;ENSG00000111602|ENST00000553532|TIMELESS 4.521616458892822 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17200 82.656 137.0 748300.0 25 0 69707.0 + 24512 MIPIQVPVE 9 132 513.2884873859182 1024.5624218386365 2 513.2889282107353 MULTI CID FTMS 0 0 0 17196 430445.4375 1.0 0 0.0 4 Unmodified _MIPIQVPVE_ REV__ENSG00000126733|ENST00000373125|DACH2;REV__nc|ENSG00000126733|Q96NX9-2|DACH2;REV__nc|ENSG00000126733|Q96NX9-3|DACH2;REV__nc|ENSG00000126733|Q96NX9-4|DACH2 16.942295170755138 0.3780752226737986 3 VVQQQVP{NN|[MP]|[D{I|L}]|[EV]} 9 -1 + 40.774 0.0 0.0 3.9797 3.9797 76.456 0.0 0.0 0.0 5.874697985817043 4.771212547196619 4.771212547196619 4.771212547196619 0 0.4247425010840047 2.0 0.0 0.3807196863200844 VVQQQVP{NN|[MP]|[D{I|L}]|[EV]};VVQQQV{I|L}[DP];[VG]AN{I|L}QVP{NN|[MP]|[D{I|L}]|[EV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}QVP{NN|[MP]|[D{I|L}]|[EV]};VV{[WT]|[RM]}PVP{NN|[MP]|[D{I|L}]|[EV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PQVP{NN|[MP]|[D{I|L}]|[EV]};VVQQ[AG]VP{NN|[MP]|[D{I|L}]|[EV]};{I|L}{I|L}MPQVP{NN|[MP]|[D{I|L}]|[EV]};VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}[HS]V;[VG]AN{I|L}QV{I|L}[DP] 3.9797;3.514;3.4063;3.3452;3.2975;3.1287;3.0809;3.0721;3.0207;2.9406 -;-;-;+;-;-;-;-;-;- + 1280 1 0.973 83856.4 1.0 11501 5697 17196 HBL1_DMSO_200M_050219_1,17200 HBL1_DMSO_200M_050219_1,17200,MIPIQVPVE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17201 82.662 323.0 306620.0 25 0 51348.0 + -1 LVNRLMSRFR 10 96 654.3746504694897 1306.7347480057792 2 654.3748657107353 MULTI CID FTMS 0 0 0 17196 324548.3125 0.4075299411830029 -4 0.3646621704101562 5 Oxidation (M) _LVNRLM(Oxidation (M))SRFR_ REV__ENSG00000094963|ENST00000209929|FMO2;REV__ENST00000209929.9_1_1:171154426-171178089:+|nuORF 3.5964929083625545 0.7100006075494749 3 {I|L} 1 -1 10.278 0.0 0.0 0.78651 0.0 0.0 1175.6395464450354 0.0 1175.6395464450354 0.0 9.018526774280158 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.78651 + + 66 + 1 0.973 89798.8 1.0 11502 5697 17196 HBL1_DMSO_200M_050219_1,17201 HBL1_DMSO_200M_050219_1,17201,LVNRLMSRFR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17202 82.668 338.0 120670.0 25 0 10096.0 22914 LSDLRVHQRIH 11 84 687.3919665918664 0 687.5598632693291 PEAK CID FTMS 0 0 0 17196 56734.953125 0.6061818735770584 -2 0.1706390380859375 6 Unmodified _LSDLRVHQRIH_ nc|ENSG00000267908|P0CG00|ZSCAN5DP 9.38312468134398 0.4559597037863106 3 V{I|L}D 3 9 20.802 0.0 0.0 1.5153 0.0 0.0 817.4802374992969 225.0888613336547 1042.5690988329516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 V{I|L}D 1.5153 - 200 + 1 0.973 38553.7 1.0 11503 5697 17196 HBL1_DMSO_200M_050219_1,17202 HBL1_DMSO_200M_050219_1,17202,LSDLRVHQRIH False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17203 82.674 334.0 110870.0 25 0 2631.8 + 9299 FIFFFFRRGRA 11 83 732.4071884428935 0 732.3254272341728 PEAK CID FTMS 0 0 0 17196 53100.6015625 0.5173196769224212 -1 0.0546493530273437 7 Unmodified _FIFFFFRRGRA_ REV__ENST00000078429.8_1_19:3121173-3121524:+|nuORF 1.3295316138638542 0.4761840153648598 3 E 1 -1 5.1607 0.0 0.0 0.3528 0.0 0.0 1135.69214070239 195.0410097711547 1330.7331504735446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 E 0.3528 - 60 + 1 0.973 35298.8 1.0 11504 5697 17196 HBL1_DMSO_200M_050219_1,17203 HBL1_DMSO_200M_050219_1,17203,FIFFFFRRGRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17204 82.681 358.0 306540.0 25 0 24470.0 + 13288 HIRKHQALHSL 11 132 670.3880616282484 1338.7615703232966 2 670.3890258669853 MULTI CID FTMS 0 0 0 17196 206451.359375 0.2308362840494729 -4 0.3646621704101562 8 Unmodified _HIRKHQALHSL_ REV__ENSG00000197360|ENST00000357774|ZNF98;REV__ENSG00000229676|ENST00000456783|ZNF492 10.073929032068715 0.8255972128077141 3 S{I|L} 2 -1 17.435 0.0 0.0 1.3023 0.0 0.0 1120.634432117045 0.0 1120.634432117045 0.0 8.226825097560422 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 S{I|L} 1.3023 + + 435 + 1 0.973 89895.4 1.0 11505 5697 17196 HBL1_DMSO_200M_050219_1,17204 HBL1_DMSO_200M_050219_1,17204,HIRKHQALHSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17205 82.688 381.0 41703.0 25 0 2541.3 -1 0 38 1088.238330066204 0 1088.238330066204 PEAK CID FTMS 0 0 0 -1 0 9 3 V{I|L} 2 -1 9.464 0.0 0.0 0.43523 0.0 0.0 1305.9491199939332 653.3347535109568 1959.28387350489 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L} 0.43523 - 14 + 1 0.973 20629.5 1.0 11506 5697 17196 HBL1_DMSO_200M_050219_1,17205 HBL1_DMSO_200M_050219_1,17205, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17206 82.694 338.0 385800.0 25 0 29533.0 -1 0 118 915.4426033316182 1828.8706537300363 2 915.4364501833916 MULTI CID FTMS 0 0 0 17196 168111.734375 0.1031878646866332 -3 0.2176437377929687 10 3 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 15 -1 + 93.487 0.0 0.0 5.1117 5.1117 55.991 0.0 0.0 0.0 15.955582699729902 52.9562246072301 15.955582699729902 0.0 0 0.7302046884880937 2.0 0.0 1.394599018282542 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QNA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]NA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQGGA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQGGA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEP[KC]QNA{M(Oxidation (M))|F}YQ[{I|L}V] 5.1117;5.1117;4.6179;4.6179;4.6179;4.6179;4.6179;4.6179;4.6179;4.5936 -;-;-;-;-;-;-;-;-;- 24486 1 0.973 89043.6 1.0 11507 5697 17196 HBL1_DMSO_200M_050219_1,17206 HBL1_DMSO_200M_050219_1,17206, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17207 82.7 379.0 80610.0 25 0 8715.0 + -1 RQALMRATE 9 60 1091.5609286079998 1090.5536521414 1 1093.554125964642 MULTI CID FTMS 0 0 0 -1 0 11 Oxidation (M) _RQALM(Oxidation (M))RATE_ REV__ENSG00000110697|ENST00000356404|PITPNM1;REV__ENST00000530381.1_1_11:67267376-67267878:-|nuORF;REV__nc|ENSG00000110697|O00562-2|PITPNM1 7.289230182591677 0.6602208344931196 3 VD 2 -1 18.469 0.0 0.0 1.6936 0.0 0.0 354.2006380806561 519.2542208307249 873.454858911381 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 VD 1.6936 - 38 + 1 0.973 27100.1 1.0 11508 5697 17196 HBL1_DMSO_200M_050219_1,17207 HBL1_DMSO_200M_050219_1,17207,RQALMRATE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17208 82.709 405.0 183960.0 25 0 12967.0 + 44089 YIYDKDMEII 10 131 651.8178823417203 1301.6212117502405 2 651.8181640505791 MULTI CID FTMS 0 0 0 17196 113326.8125 0.0295734960734684 9 -0.7469406127929688 12 Unmodified _YIYDKDMEII_ ENSG00000124422|ENST00000261497|USP22;nc|ENSG00000124422|Q9UPT9-2|USP22 32.78568957990786 0.2337485590374503 3 [Y{I|L}]S{[C(Carbamidomethyl (C))E]|[WC]}E{I|L}Y{I|L}{I|L} 10 6 + 53.606 0.0 0.0 4.1184 4.1184 82.814 0.0 0.0 0.0 16.850906723735612 10.012262311882765 10.012262311882765 11.00833760139686 0 1.048455006504028 2.0 0.4247425010840047 0.0 [Y{I|L}]S{[C(Carbamidomethyl (C))E]|[WC]}E{I|L}Y{I|L}{I|L};[Y{I|L}]S{[C(Carbamidomethyl (C))E]|[WC]}E{I|L}{I|L}[Y{I|L}];[Y{I|L}]Y[YE]YY{I|L}{I|L};[Y{I|L}]S{[WT]|[RM]}{M(Oxidation (M))|F}ME{I|L}{I|L};[{I|L}T]{[C(Carbamidomethyl (C))E]|[WC]}DY{I|L}Y{I|L}{I|L};[Y{I|L}]S{[C(Carbamidomethyl (C))E]|[WC]}[Y{I|L}]E{I|L}{I|L};{[TV]|[{I|L}S]}Y{[C(Carbamidomethyl (C))E]|[WC]}E{I|L}Y{I|L}{I|L};[{I|L}T]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}DYY{I|L}{I|L};[Y{I|L}]M{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}ME{I|L}{I|L};[Y{I|L}][WD][WM]Y{I|L}{I|L} 4.1184;3.2727;3.1942;2.9518;2.8238;2.5426;2.4611;2.4572;2.3942;2.3731 -;-;-;-;-;-;-;-;-;- 909 1 0.973 63574.8 1.0 11509 5697 17196 HBL1_DMSO_200M_050219_1,17208 HBL1_DMSO_200M_050219_1,17208,YIYDKDMEII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17210 82.713 2.9 18650000.0 25 0 2571800.0 -1 ALMAAPLSL 9 68 451.7527689299804 901.4909849267608 2 451.7528564333916 MULTI CID FTMS 0 0 0 17209 19734108.0 0.2518855445701463 12 -0.9058761596679688 1 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 63.082 0.0 0.0 6.9975 6.9975 83.741 0.0 0.0 0.0 14.432342842105896 9.889917747712644 9.889917747712644 3.0102999566398125 0 0.6989700043360187 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}ASP{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};{[TV]|[{I|L}S]}MASP{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 6.9975;6.6636;5.9958;5.3966;5.0627;4.8668;4.5269;4.3948;4.3376;4.2873 -;-;-;-;-;-;-;-;-;- 257 1 0.973 47160.8 1.0 11510 5698 17209 HBL1_DMSO_200M_050219_1,17210 HBL1_DMSO_200M_050219_1,17210,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17211 82.714 7.4 11088000.0 25 0 1159100.0 + 3888 DALDKIRLI 9 107 528.8239744481274 1055.633395963055 2 528.8242675662041 MULTI CID FTMS 0 0 0 17209 5891112.0 0.040541567233556 9 -0.728118896484375 2 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 43.77239144664712 0.0547478964384323 3 DA{I|L}DK{I|L}[R{I|L}]{I|L} 9 0 + 80.869 0.0 0.0 7.6607 7.6607 96.158 0.0 0.0 0.0 39.84514353444801 6.3110560414516215 6.3110560414516215 32.60307047412599 0 1.1549471895720984 1.6989700043360187 0.4247425010840047 0.0 + + DA{I|L}DK{I|L}[R{I|L}]{I|L};{I|L}DADK{I|L}[R{I|L}]{I|L} 7.6607;4.5722 +;- + 216 + 1 0.973 69550.0 1.0 11511 5698 17209 HBL1_DMSO_200M_050219_1,17211 HBL1_DMSO_200M_050219_1,17211,DALDKIRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17212 82.715 8.2 1540400.0 25 0 203070.0 -1 MQYPVFPFI 9 36 579.2881166872413 1156.5616804412823 2 579.2887451052666 MULTI CID FTMS 0 0 0 17209 6275683.5 0.9874192882481424 -1 0.0685806274414062 3 Oxidation (M) _M(Oxidation (M))QYPVFPFI_ ENSG00000143669|ENST00000389793|LYST;ENST00000473037.5_1_1:235826242-235897989:-|nuORF;ENST00000475277.1_1_1:235876468-235887465:-|nuORF 2.302733041254933 0.8342969208511092 3 {I|L} 1 -1 12.474 0.0 0.0 1.0786 0.0 0.0 1025.4667077623749 0.0 1025.4667077623749 0.0 9.3753063169585 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0786 + + 4 + 1 0.973 19322.4 1.0 11512 5698 17209 HBL1_DMSO_200M_050219_1,17212 HBL1_DMSO_200M_050219_1,17212,MQYPVFPFI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17213 82.717 11.0 1040900.0 25 0 164790.0 9909 FPFYGKPMRI 10 31 628.3364646422485 1254.658376351297 2 628.3371459841728 MULTI CID FTMS 0 0 0 17209 4533872.5 1.0 0 0.0 4 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 10.073929032068715 0.6785112666868882 3 {M(Oxidation (M))|F}PE 3 8 31.198 0.0 0.0 2.4866 0.0 0.0 863.4698684809606 0.0 863.4698684809606 0.0 30.819284013193347 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}PE 2.4866 - 4 1 0.973 17426.1 1.0 11513 5698 17209 HBL1_DMSO_200M_050219_1,17213 HBL1_DMSO_200M_050219_1,17213,FPFYGKPMRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17214 82.718 10.0 1355400.0 25 0 178690.0 + 29337 QIRPVQIL 8 43 483.8093717722081 965.6041906112164 2 483.8091613650322 MULTI CID FTMS 0 0 0 17209 3988718.75 0.614972411786132 -2 0.12322998046875 5 Unmodified _QIRPVQIL_ REV__ENSG00000165506|ENST00000298292|DNAAF2;REV__nc|ENSG00000165506|Q9NVR5-2|DNAAF2 2.302733041254933 0.8103549651115762 3 A 1 -1 3.0989 0.0 0.0 0.32093 0.0 0.0 809.477357580746 82.06705652408436 891.5444141048304 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.32093 - 1 + 1 0.973 17668.8 1.0 11514 5698 17209 HBL1_DMSO_200M_050219_1,17214 HBL1_DMSO_200M_050219_1,17214,QIRPVQIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17215 82.719 22.0 647230.0 25 0 86053.0 -1 SYCTMAKKLF 10 37 632.8085172986454 1263.6024816640906 2 632.8087036013603 MULTI CID FTMS 0 0 0 17209 2132949.0 0.6317152634557014 2 -0.16107177734375 6 Carbamidomethyl (C),Oxidation (M) _SYC(Carbamidomethyl (C))TM(Oxidation (M))AKKLF_ ENSG00000023572|ENST00000367439|GLRX2;nc|ENSG00000023572|Q9NS18-2|GLRX2 3.944395688203298 0.708391353636983 3 G{M(Oxidation (M))|F} 2 -1 16.198 0.0 0.0 1.2819 0.0 0.0 1041.5013444344015 0.0 1041.5013444344015 0.0 14.93882771791494 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 1.2819 - 14 + 1 0.973 19202.2 1.0 11515 5698 17209 HBL1_DMSO_200M_050219_1,17215 HBL1_DMSO_200M_050219_1,17215,SYCTMAKKLF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17216 82.72 21.0 2565500.0 25 0 311930.0 42691 VTWHHGRLI 9 75 559.8141901816448 1117.6138274300895 2 559.8148071169853 MULTI CID FTMS 0 0 0 17209 1305185.5 0.1320484100595863 -7 0.570068359375 7 Unmodified _VTWHHGRLI_ ENSG00000162139|ENST00000294064|NEU3;nc|ENSG00000162139|Q9UQ49|NEU3 25.399314129420983 0.2080152500878129 3 AEES{I|L}{I|L} 6 7 47.058 0.0 0.0 4.2105 0.0 0.0 457.3012257306656 0.0 457.3012257306656 0.0 33.24539712336197 0.0 0.0 0 0.7059771852360797 0.0 0.4247425010840047 0.0 AEES{I|L}{I|L} 4.2105 - 125 1 0.973 43816.0 1.0 11516 5698 17209 HBL1_DMSO_200M_050219_1,17216 HBL1_DMSO_200M_050219_1,17216,VTWHHGRLI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17217 82.723 117.0 1204500.0 25 0 133410.0 + -1 MLCSGPPFL 9 143 490.7324659451882 979.4503789571764 2 490.7330810427666 MULTI CID FTMS 0 0 0 17209 855571.75 0.7093717414932018 2 -0.16107177734375 8 Oxidation (M) _M(Oxidation (M))LCSGPPFL_ REV__ENST00000375893.6_1_6:31632636-31633398:-|nuORF;REV__ENST00000375895.6_1_6:31632636-31633491:-|nuORF 19.438996006549623 0.310492472477042 3 [{I|L}T]C{I|L}V 5 -1 39.922 0.0 0.0 4.0759 0.0 0.0 0.0 447.1358726083202 447.1358726083202 23.610469015915783 0.0 0.0 0.0 0 0.5 2.0 0.3494850021680094 0.0 [{I|L}T]C{I|L}V 4.0759 - 1082 1 0.973 111012.8 1.0 11517 5698 17209 HBL1_DMSO_200M_050219_1,17217 HBL1_DMSO_200M_050219_1,17217,MLCSGPPFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17218 82.724 40.0 1389900.0 25 0 127690.0 + 42770 VVIGADTIVTV 11 98 543.8239999020195 1085.633446870839 2 543.8220092654228 MULTI CID FTMS 0 0 0 17209 737733.125 0.3078551063647552 -3 0.2392196655273437 9 Unmodified _VVIGADTIVTV_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 52.268347100219714 0.1050679570471992 3 {NN|[MP]|[D{I|L}]|[EV]}QTVV{I|L} 7 8 41.401 0.0 0.0 3.8135 0.0 0.0 0.0 314.1733998339827 314.1733998339827 15.773791839132125 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.8494850021680087 0.0 {NN|[MP]|[D{I|L}]|[EV]}QTVV{I|L} 3.8135 - 676 1 0.973 52029.3 1.0 11518 5698 17209 HBL1_DMSO_200M_050219_1,17218 HBL1_DMSO_200M_050219_1,17218,VVIGADTIVTV True True VVIGADTIVTV 82.723718 543.822009265423 20576084.0 17209.0 ENSG00000169093|ENST00000381317|ASMTL;;nc|ENSG00000292339|O95671-3|ASMTL 5.448703765869141 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17219 82.726 89.0 1001600.0 25 0 138950.0 + 40990 VMAPRTLLL 9 114 507.3124166869351 1012.6102804406702 2 507.3129760622978 MULTI CID FTMS 0 0 0 17209 559293.875 0.0185595653423648 14 -0.9785537719726562 10 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 29.84058131909904 0.1515068451768857 3 VMA 3 6 50.445 0.0 0.0 4.9817 0.0 0.0 0.0 708.4439199287536 708.4439199287536 13.613787703462982 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VMA 4.9817 + + 438 + 1 0.973 74393.0 1.0 11519 5698 17209 HBL1_DMSO_200M_050219_1,17219 HBL1_DMSO_200M_050219_1,17219,VMAPRTLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17220 82.727 40.0 1154300.0 25 0 112900.0 + 14673 IIQQAFINV 9 94 523.3041480219179 1044.5937431106356 2 523.3041869997978 MULTI CID FTMS 0 0 0 17209 566164.875 0.1391657720925696 27 -1.8391799926757808 11 Unmodified _IIQQAFINV_ ENSG00000183486|ENST00000330714|MX2;ENST00000398632.3_1_21:42774955-42775423:+|nuORF;ENST00000474368.1_1_21:42773880-42775423:+|nuORF;ENST00000482953.5_1_21:42762449-42780157:+|nuORF 16.942295170755138 0.3780752226737986 3 T{I|L}E[DG]{I|L}R{I|L} 8 7 27.924 0.0 0.0 2.6732 0.0 0.0 129.0911318819231 0.0 129.0911318819231 0.0 8.970544657224835 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L}E[DG]{I|L}R{I|L} 2.6732 - 360 + 1 0.973 43610.4 1.0 11520 5698 17209 HBL1_DMSO_200M_050219_1,17220 HBL1_DMSO_200M_050219_1,17220,IIQQAFINV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17221 82.728 66.0 1035000.0 25 0 120330.0 -1 YPTFPMFW 8 89 552.7465908608268 1103.4786287884535 2 552.7469360232353 MULTI CID FTMS 0 0 0 17209 535001.375 0.6455398701668814 3 -0.2142715454101562 12 Oxidation (M) _YPTFPM(Oxidation (M))FW_ ENSG00000188779|ENST00000380035|SKOR1;nc|ENSG00000188779|P84550-3|SKOR1 11.114462752807354 0.7467182956244686 3 DW 2 -1 16.186 0.0 0.0 1.4668 0.0 0.0 784.3609052550536 0.0 784.3609052550536 0.0 3.0866814795592035 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 DW 1.4668 - 114 + 1 0.973 62408.7 1.0 11521 5698 17209 HBL1_DMSO_200M_050219_1,17221 HBL1_DMSO_200M_050219_1,17221,YPTFPMFW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17222 82.731 95.0 722270.0 25 0 64769.0 + + 19976 LILDHEVPSL 10 104 568.8536832095962 1135.6928134859922 2 568.8533813357353 MULTI CID FTMS 0 0 0 17209 489558.8125 0.1961802002220236 6 -0.5022430419921875 13 Unmodified _LIKDLVHVVT_ ENSG00000162585|ENST00000378546|FAAP20;ENST00000476803.1_1_1:2121150-2125598:-|nuORF;ENST00000401813.7_1_1:2121150-2129708:-|nuORF;nc|ENSG00000162585|Q6NZ36-3|FAAP20;nc|ENSG00000162585|Q6NZ36-5|FAAP20;nc|ENSG00000162585|Q6NZ36-2|FAAP20;ENST00000487186.5_1_1:2121150-2130436:-|nuORF;nc|ENSG00000162585|Q6NZ36-4|FAAP20;ENST00000497675.2_1_1:2125076-2125544:-|nuORF 7.289230182591677 0.6929195370588109 3 PS{I|L} 3 -1 12.384 0.0 0.0 1.0904 0.0 0.0 820.5125159411087 0.0 820.5125159411087 0.0 1.4144127238045474 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 PS{I|L} 1.0904 - 113 + 1 0.973 62504.2 1.0 11522 5698 17209 HBL1_DMSO_200M_050219_1,17222 HBL1_DMSO_200M_050219_1,17222,LIKDLVHVVT False False LILDHEVPSL 82.730555 568.853381335735 3044804.0 17209.0 ENSG00000162585|ENST00000378546|FAAP20;;ENST00000476803.1_1_1:2121150-2125598:-|nuORF;;ENST00000401813.7_1_1:2121150-2129708:-|nuORF;;nc|ENSG00000162585|Q6NZ36-3|FAAP20;;nc|ENSG00000162585|Q6NZ36-5|FAAP20;;nc|ENSG00000162585|Q6NZ36-2|FAAP20;;ENST00000487186.5_1_1:2121150-2130436:-|nuORF;;nc|ENSG00000162585|Q6NZ36-4|FAAP20;;ENST00000497675.2_1_1:2125076-2125544:-|nuORF 1.4534040093421936 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17223 82.732 81.0 1397400.0 25 0 129480.0 42864 VVLKMVTEI 9 129 516.3113367870002 1030.6081206408005 2 516.3136474490166 MULTI CID FTMS 0 0 0 17209 450849.375 0.8866537323895232 -2 0.12322998046875 14 Unmodified _VVLKMVTEI_ ENSG00000163655|ENST00000496455|GMPS;ENST00000514075.2_1_4:8176279-8176723:+|nuORF;nc|ENSG00000163655|P49915-2|GMPS 36.12702656103203 0.0967173616627612 3 [{I|L}A]{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]E{I|L} 7 5 34.56 0.0 0.0 3.3533 0.0 0.0 0.0 181.1607319397445 181.1607319397445 -7.181175785186596 0.0 -7.181175785186596 0.0 0 0.6989700043360187 1.5228787452803376 0.2887254899964357 0.0 [{I|L}A]{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]E{I|L} 3.3533 - 4516 1 0.973 91783.5 1.0 11523 5698 17209 HBL1_DMSO_200M_050219_1,17223 HBL1_DMSO_200M_050219_1,17223,VVLKMVTEI True True ALLEMDARL 82.732405 516.313647449017 2145956.0 17209.0 ENSG00000178896|ENST00000316052|EXOSC4 2.598114848136902 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17224 82.734 89.0 802380.0 25 0 79529.0 + 14265 IEGEFIVQY 9 106 549.2786974529105 1096.5428419726209 2 549.2794067263603 MULTI CID FTMS 0 0 0 17209 250227.109375 0.6606231199642267 -3 0.2392196655273437 15 Unmodified _IEGEFIVQY_ REV__ENSG00000099250|ENST00000374867|NRP1 20.453626601364224 0.2830276176381075 3 {[DA]|[EG]}{I|L}E{M(Oxidation (M))|F}V{I|L}QY 9 -1 {[DA]|[EG]}{I|L}E{M(Oxidation (M))|F}V{I|L} + + 18.711 13.787 1.7509 1.7064 1.7064 48.655 0.0 0.0 0.0 0.0 -0.7177481005518587 -0.7177481005518587 0.0 0 0.0 0.0 0.0 0.4247425010840047 {[DA]|[EG]}{I|L}E{M(Oxidation (M))|F}V{I|L}QY 1.7064 - 723 + 1 0.973 61334.1 1.0 11524 5698 17209 HBL1_DMSO_200M_050219_1,17224 HBL1_DMSO_200M_050219_1,17224,IEGEFIVQY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17225 82.741 363.0 111830.0 25 0 15618.0 -1 0 61 831.5764037966728 0 831.5764037966728 PEAK CID FTMS 0 0 0 -1 0 16 3 {I|L}P 2 -1 6.4537 0.0 0.0 0.38851 0.0 0.0 830.6865467517456 617.2990816705686 1447.9856284223142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}P 0.38851 - 32 + 1 0.973 34173.6 1.0 11525 5698 17209 HBL1_DMSO_200M_050219_1,17225 HBL1_DMSO_200M_050219_1,17225, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17226 82.748 375.0 51225.0 25 0 4707.1 -1 0 53 746.6501183015595 0 746.2809936404228 PEAK CID FTMS 0 0 0 17209 97101.6953125 1.0 0 0.0 17 3 VV 2 -1 8.5835 0.0 0.0 0.57558 0.0 0.0 305.63182732401884 984.4939669244748 1290.1257942484938 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV 0.57558 - 11 + 1 0.973 24450.1 1.0 11526 5698 17209 HBL1_DMSO_200M_050219_1,17226 HBL1_DMSO_200M_050219_1,17226, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17227 82.755 404.0 341710.0 25 0 29148.0 6598 EAPRVQPEATL 11 134 605.8269230989114 1209.639293264623 2 605.8284179568291 MULTI CID FTMS 0 0 0 17209 225878.1875 0.4666531691229743 -1 0.0685806274414062 18 Unmodified _EAPRVQPEATL_ MER52D_dup518|chr14:71230781-71232935:+|1.82709249221962|0.0272404342012767|6.07|46.0|23|2|sense 33.4449034751529 0.3133739643825231 3 [{I|L}P]A[DG]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AT{I|L} 12 6 + 64.267 0.0 0.0 5.3129 5.3129 81.881 0.0 0.0 0.0 1.372724716820244 24.42668526186118 1.372724716820244 5.820001973989939 0 1.674742501084005 1.5228787452803376 0.5 0.0 [{I|L}P]A[DG]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AT{I|L};{[QN]|[E{I|L}]|[KN]}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AT{I|L};[{I|L}A]P[DG]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AT{I|L};[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AT{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QP]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AT{I|L};{[VA]|[{I|L}G]}[WP]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AT{I|L};[PG][W{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AT{I|L};[{I|L}P]A[DG]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}ER;[VG]A[EP]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[EP]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}AT{I|L} 5.3129;4.8317;4.4439;4.1506;4.0676;3.794;3.5295;3.5051;3.4529;3.3239 -;-;-;-;-;-;-;-;-;- 371 1 0.973 100670.8 1.0 11527 5698 17209 HBL1_DMSO_200M_050219_1,17227 HBL1_DMSO_200M_050219_1,17227,EAPRVQPEATL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 17228 82.762 412.0 168930.0 25 0 21850.0 16576 KDKLLQFYPSL 11 120 676.3875710052235 1350.760589077247 2 676.3887817263603 MULTI CID FTMS 0 0 0 17209 170148.1875 0.2479238975538109 9 -0.728118896484375 19 Unmodified _KDKLLQFYPSL_ chr7:74220734-74223724|44|16.84|0.83|4.35|+|ENST00000488266|LAT2,LAT2;ENSG00000086730|ENST00000460943|LAT2;nc|ENSG00000086730|Q9GZY6-2|LAT2 8.155526934196011 0.8366696279279818 3 {I|L} 1 10 11.259 0.0 0.0 0.83353 0.0 0.0 1219.665356998925 0.0 1219.665356998925 0.0 9.26935982160881 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.83353 + + 115 + 1 0.973 57725.4 1.0 11528 5698 17209 HBL1_DMSO_200M_050219_1,17228 HBL1_DMSO_200M_050219_1,17228,KDKLLQFYPSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17229 82.774 645.0 299060.0 25 0 21257.0 + -1 RMVTSGEL 8 210 303.48684703666044 0 303.4865905642509 PEAK CID FTMS 0 0 0 17209 182464.6875 1.0 0 0.0 20 Oxidation (M) _RM(Oxidation (M))VTSGEL_ REV__ENSG00000163239|ENST00000368482|TDRD10;REV__nc|ENSG00000163239|Q5VZ19|TDRD10 3.5964929083625545 0.5870767149301087 3 R 1 -1 5.4846 0.0 0.0 0.9066 0.0 0.0 145.66236773979466 300.16193567447505 445.8243034142697 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.9066 + + 7 + 1 0.973 154261.5 1.0 11529 5698 17209 HBL1_DMSO_200M_050219_1,17229 HBL1_DMSO_200M_050219_1,17229,RMVTSGEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17231 82.778 15.0 2867300.0 25 0 299210.0 -1 CEMNLALTI 9 77 540.7562643190413 1079.4979757048825 2 540.7567626833916 MULTI CID FTMS 0 0 0 17230 3746408.75 1.0 0 0.0 1 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))EM(Oxidation (M))NLALTI_ ENST00000593093.5_1_19:1272938-1273439:+|nuORF 10.823927491677226 0.5436922275383211 3 [PA]D{[YC]|[HE]}QG{I|L}T{I|L} 10 -1 [PA]D{[YC]|[HE]}QG{I|L} + + 21.211 -0.81639 -0.096346 1.9649 1.9649 48.801 0.0 0.0 0.0 0.0 1.6288035846497415 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 [PA]D{[YC]|[HE]}QG{I|L}T{I|L} 1.9649 - 83 + 1 0.971 36399.2 1.0 11530 5699 17230 HBL1_DMSO_200M_050219_1,17231 HBL1_DMSO_200M_050219_1,17231,CEMNLALTI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17232 82.779 13.0 3338700.0 25 0 504460.0 33844 SLERIRAI 8 84 479.2938775960205 956.573202258841 2 479.2939330935478 MULTI CID FTMS 0 0 0 17230 2719072.75 0.8474285330497635 3 -0.2349472045898437 2 Unmodified _SLERIRAI_ ENSG00000029725|ENST00000537505|RABEP1;nc|ENSG00000029725|Q15276-2|RABEP1 14.581692164780916 0.6954967302934248 3 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T][{I|L}T]V[PS] 9 7 + 17.181 0.0 0.0 1.7961 1.7961 79.638 0.0 0.0 0.0 0.7277814442796462 -1.0230504489476289 -1.0230504489476289 15.228787452803374 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T][{I|L}T]V[PS];[KA]{[QN]|[E{I|L}]|[KN]}[{I|L}T]V[PS] 1.7961;0.20413 -;- 94 1 0.971 37869.9 1.0 11531 5699 17230 HBL1_DMSO_200M_050219_1,17232 HBL1_DMSO_200M_050219_1,17232,SLERIRAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17233 82.78 6.6 5169200.0 25 0 469890.0 + 22567 LPWTAEQVV 9 67 521.7820976720893 1041.5496424109783 2 521.7827026247978 MULTI CID FTMS 0 0 0 17230 7132923.0 0.1700781294856713 -3 0.1878662109375 3 Unmodified _LPWTAEQVV_ ENSG00000175216|ENST00000529230|CKAP5;ENST00000528593.1_1_11:46804822-46806223:-|nuORF;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 42.09456458481378 0.0639583784996157 3 [WP]TA{I|L}EQVV 9 2 + 72.17 0.0 0.0 6.9291 6.9291 87.325 0.0 0.0 0.0 18.69666231504993 48.26946945126394 18.69666231504993 6.064921830680703 0 0.8935078169319297 1.154901959985743 0.9802046884880936 0.0 [WP]TA{I|L}EQVV;[WP]TAE{I|L}QVV;[WP]TAEQ{I|L}VV;[WP]T{I|L}AEQVV;[WP]TA{I|L}E[AG]VV;[WP]{I|L}TAEQVV;[WP]TAE{I|L}[AG]VV;[WP]TAE[AG]{I|L}VV;[WP]T{I|L}AE[AG]VV;[{I|L}P]WTAEQVV 6.9291;6.3468;6.2243;6.1588;6.0451;5.5342;5.4628;5.3402;5.2747;5.0965 -;-;-;-;-;-;-;-;-;+ + 319 1 0.971 36870.7 1.0 11532 5699 17230 HBL1_DMSO_200M_050219_1,17233 HBL1_DMSO_200M_050219_1,17233,LPWTAEQVV True True LPWTAEQVV 82.780026 521.782702624798 1856894080.0 17230.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;ENST00000528593.1_1_11:46804822-46806223:-|nuORF;;nc|ENSG00000175216|Q14008-2|CKAP5 4.5918763478597 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17234 82.781 26.0 2087300.0 25 0 234660.0 + 15269 IPHPLIMGV 9 70 488.7861152296468 975.5576775260936 2 488.7862731814384 MULTI CID FTMS 0 0 0 17230 1919801.0 0.2702440458150553 -2 0.1332168579101562 4 Unmodified _IPHPLIMGV_ ENSG00000166200|ENST00000388901|COPS2;ENST00000559016.1_1_15:49426483-49429634:-|nuORF;nc|ENSG00000166200|P61201-2|COPS2 56.04830969593885 0.0282699710924866 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}P{I|L}MR 8 5 + 63.448 0.0 0.0 6.5038 6.5038 82.303 0.0 0.0 0.0 5.981943147099607 5.327059689071518 5.327059689071518 3.0102999566398125 0 0.8807196863200843 0.0 0.3494850021680094 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}P{I|L}MR;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P{I|L}{I|L}MR;[{I|L}P]H{I|L}P{I|L}MGV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}PM{I|L}R;[{I|L}P]{I|L}HP{I|L}MGV;[{I|L}P]HP{I|L}{I|L}MGV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P{I|L}M{I|L}R;[{I|L}P]H{I|L}PM{I|L}GV;[{I|L}P]HP{I|L}M{I|L}GV;[{I|L}P]{I|L}HPM{I|L}GV 6.5038;6.1952;5.8906;5.6245;5.5821;5.5821;5.3159;5.0113;4.7027;4.7027 -;-;-;-;-;+;-;-;-;- + 194 1 0.971 46362.4 1.0 11533 5699 17230 HBL1_DMSO_200M_050219_1,17234 HBL1_DMSO_200M_050219_1,17234,IPHPLIMGV True True IPHPLIMGV 82.781205 488.786273181438 181989588.0 17230.0 ENST00000559016.1_1_15:49426483-49429634:-|nuORF;;nc|ENSG00000166200|P61201-2|COPS2;;ENSG00000166200|ENST00000388901|COPS2 9.380250295003256 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17235 82.783 50.0 1533200.0 25 0 255450.0 + 18589 LADLIQKL 8 99 457.289408238501 912.564263543802 2 457.2895995974541 MULTI CID FTMS 0 0 0 17230 1500666.125 1.0 0 0.0 5 Unmodified _LADLIQKL_ REV__CON__A2VCT4 48.345845343767074 0.1470278396477103 3 [{I|L}A]D{I|L}{I|L}QK{I|L} 8 -1 + 72.527 0.0 0.0 7.9476 7.9476 89.291 0.0 0.0 0.0 47.12131549718679 11.894330638623607 11.894330638623607 5.523787536356579 0 1.1549471895720984 2.0 0.0 0.6643943297944485 [{I|L}A]D{I|L}{I|L}QK{I|L};[{I|L}A]{I|L}D{I|L}QK{I|L};[{I|L}A]D{I|L}{I|L}[AG]K{I|L};[{I|L}A]{I|L}D{I|L}[AG]K{I|L} 7.9476;7.3423;6.9327;6.3274 +;-;-;- + 505 + 1 0.971 63408.2 1.0 11534 5699 17230 HBL1_DMSO_200M_050219_1,17235 HBL1_DMSO_200M_050219_1,17235,LADLIQKL False False LADLIQKL 82.782513 457.289599597454 11490562.0 17230.0 -0.1666420400142669 2.0 True 8.0 False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17236 82.785 105.0 847910.0 25 0 300000.0 + 27353 PHTMDMSIIL 10 99 386.527925848909 1156.561948146927 3 386.5279724001884 MULTI CID FTMS 0 0 0 17230 1146949.625 1.0 0 0.0 6 Unmodified _PHTMDMSIIL_ ENSG00000145386|ENST00000274026|CCNA2 28.486842064014134 0.328649637529545 3 {I|L}EC{I|L}{I|L} 5 8 26.995 0.0 0.0 2.3341 0.0 0.0 567.2409775432146 0.0 567.2409775432146 0.0 8.093859345357188 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}EC{I|L}{I|L} 2.3341 - 312 + 1 0.971 75648.9 1.0 11535 5699 17230 HBL1_DMSO_200M_050219_1,17236 HBL1_DMSO_200M_050219_1,17236,PHTMDMSIIL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17237 82.789 233.0 805030.0 25 0 137560.0 + 16300 IWPNARISVM 10 145 593.8225332703377 1185.6305136074752 2 593.8239623904228 MULTI CID FTMS 0 0 0 17230 831662.9375 0.7048952012843276 -1 0.06463623046875 7 Unmodified _IWPNARISVM_ ENSG00000131844|ENST00000340941|MCCC2;nc|ENSG00000131844|Q9HCC0-2|MCCC2 39.94969957227396 0.1580982266129622 3 [W{I|L}]PNA 5 5 48.812 0.0 0.0 4.117 0.0 0.0 0.0 601.3150118463499 601.3150118463499 14.153696729953111 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.7742275032520141 + [W{I|L}]PNA 4.117 + + 911 + 1 0.971 139254.2 1.0 11536 5699 17230 HBL1_DMSO_200M_050219_1,17237 HBL1_DMSO_200M_050219_1,17237,IWPNARISVM False True IWPNARISVM 82.789124 593.823962390423 44674899.0 17230.0 nc|ENSG00000131844|Q9HCC0-2|MCCC2;;ENSG00000131844|ENST00000340941|MCCC2 6.157430966695149 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17238 82.791 70.0 972930.0 25 0 73735.0 + 45067 YPYGSPPPLI 10 73 552.2923181377896 1102.5700833423791 2 552.2927734255791 MULTI CID FTMS 0 0 0 17230 665144.8125 1.0 0 0.0 8 Unmodified _YPYGSPPPLI_ ENSG00000150347|ENST00000279873|ARID5B;nc|ENSG00000150347|Q14865-2|ARID5B 20.453626601364224 0.5043500229302764 3 [Y{M(Oxidation (M))|F}]PP 4 7 14.693 0.0 0.0 1.3326 0.0 0.0 0.0 595.3586602977325 595.3586602977325 -1.2763625255165325 0.0 -1.2763625255165325 0.0 0 0.0 0.0 0.0 0.0 [Y{M(Oxidation (M))|F}]PP 1.3326 - 82 + 1 0.971 61025.3 1.0 11537 5699 17230 HBL1_DMSO_200M_050219_1,17238 HBL1_DMSO_200M_050219_1,17238,YPYGSPPPLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17239 82.796 262.0 546050.0 25 0 64484.0 + 45726 YYFEGIKQTF 10 140 648.3189746059611 1294.623396278722 2 648.3172485232353 MULTI CID FTMS 0 0 0 17230 641465.4375 0.5196946214379708 3 -0.2349472045898437 9 Unmodified _YYFEGIKQTF_ ENSG00000100591|ENST00000216479|AHSA1;ENST00000556369.1_3_14:77935388-77935589:+|nuORF 125.52916310638032 0.0002202040671188 3 YY{M(Oxidation (M))|F}EG{I|L}KQT{M(Oxidation (M))|F} 10 0 + 88.669 0.0 0.0 6.849 6.849 89.737 0.0 0.0 0.0 50.65552802072581 13.521825181113629 13.521825181113629 9.164539485499247 0 1.5726825097560422 2.0 2.190614065464281 0.6421590589602533 + + YY{M(Oxidation (M))|F}EG{I|L}KQT{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}EG{I|L}K[AG]T{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}W{I|L}KQT{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}W{I|L}K[AG]T{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}EG{I|L}KYNV;YY{M(Oxidation (M))|F}EG{I|L}[YE]V{I|L};YY{M(Oxidation (M))|F}EG{I|L}[YE]{I|L}V;YY{M(Oxidation (M))|F}E{I|L}[WY]V{I|L};YY{M(Oxidation (M))|F}W{I|L}[YE]V{I|L};YY{M(Oxidation (M))|F}EG{I|L}[RH][NP] 6.849;6.1411;6.1391;5.4278;4.3514;4.2471;4.0302;3.7612;3.7391;3.6731 +;-;-;-;-;-;-;-;-;- + 5774 + 1 0.971 108855.0 1.0 11538 5699 17230 HBL1_DMSO_200M_050219_1,17239 HBL1_DMSO_200M_050219_1,17239,YYFEGIKQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17240 82.802 320.0 185160.0 25 0 30984.0 -1 0 50 1126.83310852255 3377.4774961678504 3 1127.502734363079 MULTI CID FTMS 0 0 0 17230 442288.1875 0.490054199081941 3 -0.2349472045898437 10 3 E{M(Oxidation (M))|F} 2 -1 7.9588 0.0 0.0 0.23564 0.0 0.0 2469.095856618825 629.2459200494749 3098.3417766683 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{M(Oxidation (M))|F} 0.23564 - 17 + 1 0.971 54525.7 1.0 11539 5699 17230 HBL1_DMSO_200M_050219_1,17240 HBL1_DMSO_200M_050219_1,17240, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17241 82.807 300.0 214790.0 25 0 37859.0 + -1 RRRCCRRRCRR 11 81 874.4667569677141 0 874.4661132693291 PEAK CID FTMS 0 0 0 17230 318081.5625 1.0 0 0.0 11 3 Carbamidomethyl (C) _RRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))RRRC(Carbamidomethyl (C))RR_ REV__ENST00000225983.10_1_17:42195053-42201005:-|nuORF 0.0 0.4761840153648598 3 GY{I|L}GG 5 -1 22.563 0.0 0.0 1.2916 0.0 0.0 990.5369552422655 306.1468294733032 1296.683784715569 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GY{I|L}GG 1.2916 - 174 + 1 0.971 48721.7 1.0 11540 5699 17230 HBL1_DMSO_200M_050219_1,17241 HBL1_DMSO_200M_050219_1,17241,RRRCCRRRCRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17242 82.815 452.0 364520.0 25 0 43007.0 24566 MLFKALLIIYG 11 119 427.9259532253952 1280.7560302763857 3 427.9253417849541 MULTI CID FTMS 0 0 0 17230 326713.0625 0.3285464130874806 -2 0.1332168579101562 12 Unmodified _MLFKALLIIYG_ ENSG00000153294|ENST00000283303|ADGRF4 1.4819007175156935 0.86815623132643 3 [QA]PD 4 10 13.188 0.0 0.0 1.0297 0.0 0.0 0.0 866.5590247276764 866.5590247276764 3.187587626244124 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [QA]PD 1.0297 - 68 + 1 0.971 135295.9 1.0 11541 5699 17230 HBL1_DMSO_200M_050219_1,17242 HBL1_DMSO_200M_050219_1,17242,MLFKALLIIYG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17243 82.821 335.0 385490.0 25 0 73998.0 27448 PIVFPLWLTVP 11 141 641.3851135857544 1280.7556742383088 2 641.3851196169853 MULTI CID FTMS 0 0 0 17230 317246.03125 0.2238385035265148 -3 0.1878662109375 13 Unmodified _PIVFPLWLTVP_ ENSG00000074621|ENST00000261892|SLC24A1;ENST00000434116.6_1_15:65916409-65944223:+|nuORF;nc|ENSG00000074621|O60721-2|SLC24A1;nc|ENSG00000074621|O60721-3|SLC24A1 6.2057823575117 0.8458686499021061 3 [{I|L}P]S 3 9 15.986 0.0 0.0 1.2482 0.0 0.0 0.0 980.5642124065306 980.5642124065306 5.1485391557157385 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [{I|L}P]S 1.2482 - 373 1 0.971 100707.6 1.0 11542 5699 17230 HBL1_DMSO_200M_050219_1,17243 HBL1_DMSO_200M_050219_1,17243,PIVFPLWLTVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17244 82.827 333.0 72436.0 25 0 16224.0 -1 0 50 751.1897460818291 0 751.1897460818291 PEAK CID FTMS 0 0 0 -1 0 14 3 VD 2 -1 9.464 0.0 0.0 0.63078 0.0 0.0 1044.136864134558 239.104303228186 1283.241167362744 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VD 0.63078 - 26 + 1 0.971 27661.5 1.0 11543 5699 17230 HBL1_DMSO_200M_050219_1,17244 HBL1_DMSO_200M_050219_1,17244, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17245 82.833 339.0 231330.0 25 0 30231.0 + 10706 FVYPLDFARTR 11 114 692.8720227367106 1383.7294925402211 2 693.3740112185478 MULTI CID FTMS 0 0 0 17230 278542.96875 1.0 0 0.0 15 Unmodified _FVYPLDFARTR_ ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6 19.361941925380144 0.6323962752489956 3 {[DA]|[EG]}V{I|L} 4 9 16.753 0.0 0.0 1.2107 0.0 0.0 0.0 982.4894438712148 982.4894438712148 1.3469857389745634 0.0 0.0 0.0 0 0.0 0.6575773191777937 0.0 0.0 {[DA]|[EG]}V{I|L} 1.2107 - 147 1 0.971 63147.3 1.0 11544 5699 17230 HBL1_DMSO_200M_050219_1,17245 HBL1_DMSO_200M_050219_1,17245,FVYPLDFARTR False True FVYPLDFARTR 82.833332 692.873 2359774.0 17230.0 ENSG00000151729|ENST00000281456|SLC25A4;;ENSG00000169100|ENST00000381401|SLC25A6;;ENSG00000005022|ENST00000317881|SLC25A5 5.108395417531331 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17246 82.841 330.0 524420.0 25 0 52372.0 + 21164 LPAVSLEV 8 98 827.4883416008829 826.4810651342829 1 827.4891235232353 MULTI CID FTMS 0 0 0 17230 283492.25 0.3614706391909594 -2 0.1332168579101562 16 Unmodified _LPAVSLEV_ ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A 98.80718514221952 0.0867704633024581 3 [{I|L}P]AVS{I|L}EV 8 0 + 80.614 0.0 0.0 9.7539 9.7539 83.181 0.0 0.0 0.0 20.0 11.645293596321125 11.645293596321125 0.2422750325201406 0 0.6139829889124311 1.5228787452803376 1.110924374808178 0.0 + + [{I|L}P]AVS{I|L}EV;[{I|L}P]G{I|L}S{I|L}EV;[{I|L}P]GS{I|L}{I|L}EV;[{I|L}P]AVS{I|L}D{I|L};[{I|L}P]G{I|L}S{I|L}D{I|L};[{I|L}P]AVSE{I|L}V;[{I|L}P]G{I|L}SE{I|L}V;[{I|L}P]GS{I|L}{I|L}D{I|L};[{I|L}P]GS{I|L}E{I|L}V;[PA]{I|L}VS{I|L}EV 9.7539;9.7246;9.1148;8.3449;8.3155;8.1622;8.1328;7.7058;7.5231;7.334 +;-;-;-;-;-;-;-;-;- + 1146 1 0.971 117939.3 1.0 11545 5699 17230 HBL1_DMSO_200M_050219_1,17246 HBL1_DMSO_200M_050219_1,17246,LPAVSLEV True True LPAVSLEV 82.840517 827.489123523235 16885406.0 17230.0 nc|ENSG00000076108|Q9UIF9|BAZ2A;;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;;ENSG00000076108|ENST00000549884|BAZ2A 3.808173974355062 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17247 82.846 274.0 82331.0 25 0 5677.9 -1 0 54 807.7705566287041 0 807.7705566287041 PEAK CID FTMS 0 0 0 -1 0 17 3 {I|L} 1 -1 5.4846 0.0 0.0 0.33991 0.0 0.0 942.2021107165892 555.2217501275999 1497.4238608441892 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.33991 - 4 + 1 0.971 22149.9 1.0 11546 5699 17230 HBL1_DMSO_200M_050219_1,17247 HBL1_DMSO_200M_050219_1,17247, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17248 82.855 554.0 317020.0 25 0 52650.0 + -1 IAMYCDLA 8 191 319.4776221560376 0 319.4772521853447 PEAK CID FTMS 0 0 0 17230 244285.140625 0.9502951982957444 -1 0.06463623046875 18 Carbamidomethyl (C) _IAMYC(Carbamidomethyl (C))DLA_ REV__OR52R1|p.V127M|1|0.35|ENSG00000279270|chr11:4804002-4804002|C/T|missense_variant 16.942295170755138 0.4635191396245973 3 A 1 -1 6.9897 0.0 0.0 1.0974 0.0 0.0 480.81393464235015 82.06701837711171 562.8809530194619 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.0974 + + 7 + 1 0.971 139769.2 1.0 11547 5699 17230 HBL1_DMSO_200M_050219_1,17248 HBL1_DMSO_200M_050219_1,17248,IAMYCDLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17249 82.865 525.0 300140.0 25 0 34663.0 + 17875 KQLNHFWEI 9 168 405.54873243387374 1213.6243679018212 3 405.5487853884697 MULTI CID FTMS 0 0 0 17230 217799.375 0.5339066063701424 -1 0.06463623046875 19 Unmodified _KQLNHFWEI_ ENSG00000079246|ENST00000392132|XRCC5 39.957323273325 0.0756908302845263 3 {[QN]|[E{I|L}]|[KN]}[Q{I|L}]H{M(Oxidation (M))|F}WE{I|L} 9 2 + 53.535 0.0 0.0 4.4111 4.4111 73.782 0.0 0.0 0.0 1.96551879614519 13.003013171528806 1.96551879614519 1.96551879614519 0 0.0 0.0 0.3807196863200844 1.960409376976188 {[QN]|[E{I|L}]|[KN]}[Q{I|L}]H{M(Oxidation (M))|F}WE{I|L};[HN]{I|L}{M(Oxidation (M))|F}QKWE{I|L};[HN]{I|L}QK{M(Oxidation (M))|F}WE{I|L};[NS][RP]GQKWE{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[HV]GQKWE{I|L};[HN]{M(Oxidation (M))|F}{I|L}QKWE{I|L};[DV][R{I|L}]H{M(Oxidation (M))|F}WE{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[H{I|L}]GQKWE{I|L};[HN]{I|L}{M(Oxidation (M))|F}QWKE{I|L};[NS][RP]GQWKE{I|L} 4.4111;4.2492;4.2252;4.2245;4.0044;3.8872;3.77;3.7374;3.7274;3.7027 -;-;-;-;-;-;-;-;-;- 2824 1 0.971 126312.7 1.0 11548 5699 17230 HBL1_DMSO_200M_050219_1,17249 HBL1_DMSO_200M_050219_1,17249,KQLNHFWEI True True KQLNHFWEI 82.86455 405.54878538847 4837146.5 17230.0 ENSG00000079246|ENST00000392132|XRCC5 5.377218087514241 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17250 82.87 297.0 89899.0 25 0 4897.4 -1 RRRRFKMRRM 10 73 762.9338867068291 0 762.9338867068291 PEAK CID FTMS 0 0 0 -1 0 20 2 Oxidation (M) _RRRRFKM(Oxidation (M))RRM(Oxidation (M))_ ENSG00000023171|ENST00000635736|GRAMD1B 0.4007161486938917 0.3961065659209837 3 TW 2 -1 8.5835 0.0 0.0 0.56328 0.0 0.0 900.5387196033081 333.15815149478755 1233.6968710980957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TW 0.56328 - 77 + 1 0.971 25152.0 1.0 11549 5699 17230 HBL1_DMSO_200M_050219_1,17250 HBL1_DMSO_200M_050219_1,17250,RRRRFKMRRM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17252 82.874 1.2 36522000.0 25 0 5662500.0 + 4612 DAYTVLTRI 9 62 526.2927680362789 1050.5709831393576 2 526.2931396365166 MULTI CID FTMS 0 0 0 17251 42314388.0 1.0 0 0.0 1 Unmodified _DAYTVLTRI_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 40.23920728925047 0.0741434193262949 3 {[DA]|[EG]}YTV{I|L}TR{I|L} 9 0 + 71.781 0.0 0.0 6.8326 6.8326 85.805 0.0 0.0 0.0 52.57306283537218 6.075543018713816 6.075543018713816 4.771212547196626 0 1.274227503252014 1.6989700043360187 0.4247425010840047 0.0 + + {[DA]|[EG]}YTV{I|L}TR{I|L};{[DA]|[EG]}YT{I|L}VTR{I|L};{[DA]|[EG]}Y{I|L}S{I|L}TR{I|L};{[DA]|[EG]}Y{I|L}TVTR{I|L};{[DA]|[EG]}{I|L}YS{I|L}TR{I|L};{[DA]|[EG]}{I|L}YTVTR{I|L} 6.8326;6.3784;6.1418;5.6876;5.4509;4.9968 +;-;-;-;-;- + 124 + 1 0.971 42463.1 1.0 11550 5700 17251 HBL1_DMSO_200M_050219_1,17252 HBL1_DMSO_200M_050219_1,17252,DAYTVLTRI True True DAYTVLTRI 82.874109 526.293139636517 1693352960.0 17251.0 ENSG00000183207|ENST00000595090|RUVBL2;;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;;nc|ENSG00000183207|Q9Y230-2|RUVBL2 6.322110493977864 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17253 82.875 4.5 14304000.0 25 0 2431700.0 + 9900 FPFYGKPMRI 10 65 419.2266611861339 1254.6581541586015 3 419.2268249392509 MULTI CID FTMS 0 0 0 17251 9279644.0 0.7623442063560915 8 -0.6353988647460938 2 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 34.40172386719151 0.2166836008404837 3 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 67.612 0.0 0.0 5.3889 0.0 0.0 119.0740452497086 0.0 119.0740452497086 0.0 45.39381281052492 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.3889 - 196 1 0.971 54753.5 1.0 11551 5700 17251 HBL1_DMSO_200M_050219_1,17253 HBL1_DMSO_200M_050219_1,17253,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17254 82.876 9.3 4895000.0 25 0 1061200.0 + 15565 IPYHIVNIV 9 63 534.3160850614504 1066.6176171897007 2 534.3160278201103 MULTI CID FTMS 0 0 0 17251 5580517.0 0.0964131381172348 8 -0.6353988647460938 3 Unmodified _IPYHIVNIV_ ENSG00000031698|ENST00000234677|SARS1 32.116972079565 0.1225432171549407 3 {[QV]|[N{I|L}]|[RA]|[KV]}[WP]VN{I|L}{I|L}V 9 5 + 67.413 0.0 0.0 6.3203 6.3203 60.068 0.0 0.0 0.0 6.020599913279625 16.478174818886373 6.020599913279625 0.0 0 0.805462187404089 2.0 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}[WP]VN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}VN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]V{I|L}N{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}VN{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}VN{I|L}{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}V{I|L}N{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}VGG{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]VGG{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]V{I|L}GG{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}VGG{I|L}V 6.3203;6.3203;6.038;5.7558;5.7558;5.4736;5.457;5.457;5.1747;4.5648 -;-;-;-;-;-;-;-;-;- 239 1 0.971 45787.9 1.0 11552 5700 17251 HBL1_DMSO_200M_050219_1,17254 HBL1_DMSO_200M_050219_1,17254,IPYHIVNIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17255 82.878 16.0 2632100.0 25 0 176140.0 -1 0 70 881.907832465658 1761.801111998116 2 881.9075195193291 MULTI CID FTMS 0 0 0 17251 3846766.75 1.0 0 0.0 4 3 [YQ]V[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 81.877 0.0 0.0 4.6474 4.6474 82.266 0.0 0.0 0.0 3.382445642997453 74.88737203213589 3.382445642997453 9.030899869919438 0 1.0924778212679485 0.0 0.0 1.110924374808178 [YQ]V[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]A[AG]QDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]AQQDA{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ]V[CS]AQ[AG]DA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]DA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQW{M(Oxidation (M))|F}YQV{I|L};[YQ]VDD{[WT]|[RM]}DA{M(Oxidation (M))|F}YQV{I|L} 4.6474;4.1348;4.1348;4.1348;4.1322;3.6196;3.6196;3.6196;3.5114;3.3742 -;-;-;-;-;-;-;-;-;- 920 1 0.971 36017.1 1.0 11553 5700 17251 HBL1_DMSO_200M_050219_1,17255 HBL1_DMSO_200M_050219_1,17255, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17256 82.879 17.0 4301700.0 25 0 501080.0 + 1702 ALPLSEGTH 9 94 462.7438414389623 923.4731299447244 2 462.7437621951103 MULTI CID FTMS 0 0 0 17251 2389713.25 0.5024379046792463 14 -0.8909759521484375 5 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 15.847184025352805 0.4077185912009129 3 [{I|L}A]P{I|L} 4 -1 38.06 0.0 0.0 4.1214 0.0 0.0 0.0 526.1896456354124 526.1896456354124 26.95046257204389 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.1214 + + 42 + 1 0.971 59702.5 1.0 11554 5700 17251 HBL1_DMSO_200M_050219_1,17256 HBL1_DMSO_200M_050219_1,17256,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17257 82.88 27.0 1931900.0 25 0 254220.0 + 12711 GVLSSDGVWRV 11 55 587.814718111146 0 587.8145629763603 PEAK CID FTMS 0 0 0 17251 2209703.75 0.2193527798601989 4 -0.3411712646484375 6 Unmodified _GVLSSDGVWRV_ ENSG00000125459|ENST00000245564|MSTO1;ENST00000483734.5_1_1:155580745-155584061:+|nuORF;nc|ENSG00000125459|Q9BUK6-2|MSTO1;nc|ENSG00000125459|Q9BUK6-3|MSTO1 37.07464296494664 0.1580381409425922 3 {I|L}SSDVGW 7 6 52.511 0.0 0.0 4.4743 0.0 0.0 156.08871727811874 270.15915857486567 426.2478758529844 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.3807196863200844 0.0 {I|L}SSDVGW 4.4743 - 215 + 1 0.971 47225.4 1.0 11555 5700 17251 HBL1_DMSO_200M_050219_1,17257 HBL1_DMSO_200M_050219_1,17257,GVLSSDGVWRV False True GVLSSDGVWRV 82.880015 587.81456297636 345856000.0 17251.0 ENSG00000125459|ENST00000245564|MSTO1;;nc|ENSG00000125459|Q9BUK6-3|MSTO1;;nc|ENSG00000125459|Q9BUK6-2|MSTO1;;ENST00000483734.5_1_1:155580745-155584061:+|nuORF 9.573570410410564 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17258 82.881 24.0 2081000.0 25 0 127310.0 + 45669 YVTEELPQL 9 82 546.2834702973372 1090.5523876614743 2 546.2835571169853 MULTI CID FTMS 0 0 0 17251 2132140.0 0.6956970033889346 -1 0.096435546875 7 Unmodified _YVTEELPQL_ ENSG00000139684|ENST00000378720|ESD 53.57557251787612 0.0325303259649373 3 K{I|L}[C(Carbamidomethyl (C))S]PQ{I|L} 7 6 25.794 0.0 0.0 2.3652 0.0 0.0 246.1205772140118 0.0 246.1205772140118 0.0 6.669270744314346 0.0 0.0 0 0.5 0.0 0.0 0.805462187404089 K{I|L}[C(Carbamidomethyl (C))S]PQ{I|L} 2.3652 - 330 + 1 0.971 45456.1 1.0 11556 5700 17251 HBL1_DMSO_200M_050219_1,17258 HBL1_DMSO_200M_050219_1,17258,YVTEELPQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17259 82.882 35.0 252900.0 25 0 49667.0 -1 VFRCFKCCE 9 21 624.7674961874279 1247.5204394416558 2 624.7678100466728 MULTI CID FTMS 0 0 0 17251 1354766.75 0.4564655280973002 2 -0.1385116577148437 8 2 Carbamidomethyl (C) _VFRC(Carbamidomethyl (C))FKC(Carbamidomethyl (C))CE_ ENST00000537435.2_1_12:95928028-95941786:-|nuORF;ENST00000549639.1_2_12:95928028-95942314:-|nuORF 2.302733041254933 0.8342969208511092 3 W 1 -1 14.604 0.0 0.0 1.1706 0.0 0.0 1043.42819808599 0.0 1043.42819808599 0.0 9.119543704721591 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1706 - 4 + 1 0.971 17380.3 1.0 11557 5700 17251 HBL1_DMSO_200M_050219_1,17259 HBL1_DMSO_200M_050219_1,17259,VFRCFKCCE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17260 82.886 190.0 233120.0 25 0 33664.0 + 35121 SQYEEQFVTL 10 75 622.2958720100562 1242.5771910869123 2 622.2958251833916 MULTI CID FTMS 0 0 0 17251 1051349.25 0.6096936488024928 1 -0.0531997680664062 9 Unmodified _SQYEEQFVTL_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF 45.739877483867886 0.1051543674217965 3 [YE]EQSQ{M(Oxidation (M))|F} 7 6 42.312 0.0 0.0 3.4052 0.0 0.0 0.0 328.1867003498522 328.1867003498522 22.403726003536303 0.0 0.0 0.0 0 0.0 0.0 1.5356668758921828 0.0 [YE]EQSQ{M(Oxidation (M))|F} 3.4052 - 650 1 0.971 37459.8 1.0 11558 5700 17251 HBL1_DMSO_200M_050219_1,17260 HBL1_DMSO_200M_050219_1,17260,SQYEEQFVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17261 82.888 89.0 1195500.0 25 0 211890.0 + -1 LAATTLMMG 9 100 470.7263124699047 939.4380720066094 2 470.7264282107353 MULTI CID FTMS 0 0 0 17251 1016941.125 0.2088707908404547 -22 1.770599365234375 10 2 Oxidation (M) _LAATTLM(Oxidation (M))M(Oxidation (M))G_ REV__ENSG00000187066|ENST00000530719|TMEM262 21.74664581756881 0.2544899275067181 3 {I|L}A{I|L} 3 -1 45.93 0.0 0.0 4.8891 0.0 0.0 0.0 639.2105452636888 639.2105452636888 28.94016261540408 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 {I|L}A{I|L} 4.8891 - 96 + 1 0.971 85584.6 1.0 11559 5700 17251 HBL1_DMSO_200M_050219_1,17261 HBL1_DMSO_200M_050219_1,17261,LAATTLMMG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17262 82.889 37.0 386120.0 25 0 27341.0 42322 VSWRRKKL 8 36 536.8419542279347 1071.669355522669 2 536.8423339724541 MULTI CID FTMS 0 0 0 17251 845239.8125 1.0 0 0.0 11 Unmodified _VSWRRKKL_ ENSG00000132429|ENST00000254765|POPDC3 2.577480529830294 0.808687252328423 3 {I|L} 1 7 10.837 0.0 0.0 1.0113 0.0 0.0 940.5744438789178 0.0 940.5744438789178 0.0 6.233361666706943 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0113 + + 7 + 1 0.971 19263.7 1.0 11560 5700 17251 HBL1_DMSO_200M_050219_1,17262 HBL1_DMSO_200M_050219_1,17262,VSWRRKKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17263 82.893 226.0 335450.0 25 0 39074.0 + 40824 VLMTEDIKL 9 115 531.2996684141414 1060.5847838950826 2 531.2993652224541 MULTI CID FTMS 0 0 0 17251 812177.5 0.9855392797792 -1 0.096435546875 12 Unmodified _VLMTEDIKL_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 36.506200033944 0.094635877243972 3 V{I|L}MTED{I|L}K{I|L} 9 0 + 73.286 0.0 0.0 6.91 6.91 92.023 0.0 0.0 0.0 53.62063790808534 10.590992953673537 10.590992953673537 11.665543185820226 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + + V{I|L}MTED{I|L}K{I|L};V{I|L}MTE[R{I|L}]TV;V{I|L}MTEKKNV;V{I|L}{M(Oxidation (M))|F}[DV]D{I|L}K{I|L};V{I|L}MTE[R{I|L}]S{I|L};V{I|L}MTEKKGGV;V{I|L}{M(Oxidation (M))|F}[DV][R{I|L}]TV;V{I|L}{M(Oxidation (M))|F}[DV][R{I|L}]S{I|L};V{I|L}{M(Oxidation (M))|F}[DV]KKNV 6.91;5.8101;5.6945;5.5919;5.5262;4.6003;4.492;4.2082;4.0764 +;-;-;-;-;-;-;-;- + 353 + 1 0.971 64309.4 1.0 11561 5700 17251 HBL1_DMSO_200M_050219_1,17263 HBL1_DMSO_200M_050219_1,17263,VLMTEDIKL True True VLMTEDIKL 82.89345 531.299365222454 6060124.0 17251.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 6.578900337219238 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17264 82.895 87.0 845030.0 25 0 105680.0 + + 8239 AINEEFVSI 9 93 511.2643144051571 1020.5140758771142 2 511.2646057009697 MULTI CID FTMS 0 0 0 17251 808379.875 0.6928085046846514 -1 0.096435546875 13 Unmodified _EQDFALVSL_ ENSG00000133103|ENST00000455146|COG6;nc|ENSG00000133103|Q9Y2V7-2|COG6 49.93300154707207 0.0405168250806675 3 {[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}A{I|L}S[{I|L}V] 9 -1 + 45.336 0.0 0.0 4.4425 4.4425 79.465 0.0 0.0 0.0 6.311784916002054 5.642492736872597 5.642492736872597 6.311784916002054 0 0.0 0.0 1.2764209843288905 0.75 {[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}A{I|L}S[{I|L}V];[{I|L}A]NEE{M(Oxidation (M))|F}S[{I|L}V];{[QD]|[EN]|[WG]|[KD]|[RS]}EA{M(Oxidation (M))|F}{I|L}S[{I|L}V];[{I|L}A]DQE{M(Oxidation (M))|F}S[{I|L}V];{[QD]|[EN]|[WG]|[KD]|[RS]}EA{I|L}{M(Oxidation (M))|F}S[{I|L}V];[{I|L}A]GGEE{M(Oxidation (M))|F}S[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}AQE{M(Oxidation (M))|F}S[{I|L}V];[{I|L}A]D[AG]E{M(Oxidation (M))|F}S[{I|L}V];[VG]AAEE{M(Oxidation (M))|F}S[{I|L}V];[{I|L}A]NE[{M(Oxidation (M))|F}T]D[{I|L}V] 4.4425;3.824;3.6683;3.6066;3.2521;2.9217;2.7217;2.7043;2.5861;2.3898 -;-;-;-;-;-;-;-;-;- 408 1 0.971 65129.6 1.0 11562 5700 17251 HBL1_DMSO_200M_050219_1,17264 HBL1_DMSO_200M_050219_1,17264,EQDFALVSL False False AINEEFVSI 82.895396 511.26460570097 6354755.0 17251.0 ENSG00000133103|ENST00000455146|COG6;;nc|ENSG00000133103|Q9Y2V7-2|COG6 3.361250956853231 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17265 82.897 57.0 1172400.0 25 0 70677.0 + 10778 FYPPPRITL 9 87 552.3158791596387 1102.617205386077 2 552.3160888552666 MULTI CID FTMS 0 0 0 17251 438675.0625 0.295091206327029 -23 1.8084716796875 14 Unmodified _FYPPPRITL_ ENSG00000102221|ENST00000614628|JADE3 24.020572477871973 0.2255576514309169 3 [Y{I|L}]K 3 7 21.171 0.0 0.0 1.9201 0.0 0.0 0.0 695.3518910152367 695.3518910152367 2.230749808046326 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [Y{I|L}]K 1.9201 - 59 1 0.971 57608.4 1.0 11563 5700 17251 HBL1_DMSO_200M_050219_1,17265 HBL1_DMSO_200M_050219_1,17265,FYPPPRITL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17266 82.902 302.0 621920.0 25 0 58164.0 + 35084 SQVEIKLSL 9 182 508.8030252633365 1015.591497593473 2 508.8021728396416 MULTI CID FTMS 0 0 0 17251 481731.15625 0.4951232181081891 -3 0.2296524047851562 15 Unmodified _SQVEIKLSL_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 90.13494162714682 0.0149365284241176 3 {[QS]|[NT]}VE{I|L}K{I|L}S{I|L} 9 0 {[QS]|[NT]} + + 53.757 18.384 8.5473 5.2931 5.2931 56.657 0.0 0.0 0.0 0.0 5.866020026414525 0.0 0.0 0 1.6861818737241734 0.0 1.54486753786912 0.0 + + {[QS]|[NT]}VE{I|L}K{I|L}S{I|L} 5.2931 + + 4924 + 1 0.971 146300.6 1.0 11564 5700 17251 HBL1_DMSO_200M_050219_1,17266 HBL1_DMSO_200M_050219_1,17266,SQVEIKLSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17267 82.908 284.0 314280.0 25 0 58021.0 + -1 IPAMAQPFV 9 77 972.5274020559524 1943.0402511787047 2 973.0291625857352 MULTI CID FTMS 0 0 0 17251 422843.96875 1.0 0 0.0 16 nc|ENSG00000163754|P46976-2|GYG1;ENSG00000163754|ENST00000345003|GYG1 3 [{I|L}P]AMREQVT 9 -1 46.459 0.0 0.0 2.391 0.0 0.0 0.0 914.4883462316922 914.4883462316922 28.042651856219923 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.6694451763165201 [{I|L}P]AMREQVT 2.391 - 10773 1 0.971 64080.8 1.0 11565 5700 17251 HBL1_DMSO_200M_050219_1,17267 HBL1_DMSO_200M_050219_1,17267, False False IPAMAQPFV 82.907644 972.5281 558610.75 17251.0 nc|ENSG00000163754|P46976-2|GYG1;;ENSG00000163754|ENST00000345003|GYG1 3.800393978754679 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17268 82.913 287.0 116820.0 25 0 28363.0 + 37647 TLLRRLEERI 10 53 649.8987666381556 1297.7829803431111 2 649.8987914919853 MULTI CID FTMS 0 0 0 17251 395659.90625 0.6667329303518291 -2 0.16107177734375 17 Unmodified _TLLRRLEERI_ REV__ENSG00000166153|ENST00000550587|DEPDC4;REV__ENST00000378244.6_1_12:100636296-100649830:-|nuORF;REV__ENST00000416321.5_1_12:100646057-100649830:-|nuORF 0.4583401331227399 0.7245164002484112 3 V 1 -1 11.42 0.0 0.0 0.87996 0.0 0.0 1180.7036021466251 0.0 1180.7036021466251 0.0 5.9354332167857216 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.87996 - 8 + 1 0.971 37937.8 1.0 11566 5700 17251 HBL1_DMSO_200M_050219_1,17268 HBL1_DMSO_200M_050219_1,17268,TLLRRLEERI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17269 82.915 94.0 400030.0 25 0 38368.0 -1 LYITCFREI 9 73 607.8181263362513 0 607.8187744021416 PEAK CID FTMS 0 0 0 17251 397650.21875 1.0 0 0.0 18 Carbamidomethyl (C) _LYITC(Carbamidomethyl (C))FREI_ ENSG00000123607|ENST00000243344|TTC21B;TTC21B|p.E717K|1|0.18|ENSG00000123607|chr2:165913636-165913636|C/T|missense_variant 20.453626601364224 0.1969592619112565 3 EWC(Carbamidomethyl (C)){I|L}[YV]{M(Oxidation (M))|F} 7 -1 13.231 0.0 0.0 1.0902 0.0 0.0 131.08971939038503 82.06704889468983 213.1567682850749 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EWC(Carbamidomethyl (C)){I|L}[YV]{M(Oxidation (M))|F} 1.0902 - 104 + 1 0.971 33722.8 1.0 11567 5700 17251 HBL1_DMSO_200M_050219_1,17269 HBL1_DMSO_200M_050219_1,17269,LYITCFREI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17270 82.918 130.0 600400.0 25 0 59966.0 + 10234 FQNPFRSEL 9 120 569.2891042206641 1136.563655508128 2 569.2861205935478 MULTI CID FTMS 0 0 0 17251 337546.15625 1.0 0 0.0 19 Unmodified _FQNPFRSEL_ ENSG00000073050|ENST00000262887|XRCC1 39.94969957227396 0.0757326808254658 3 {I|L}{I|L}[YN]{M(Oxidation (M))|F}PN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 6 + 39.415 0.0 0.0 3.4679 3.4679 72.08 0.0 0.0 0.0 2.584575090142493 2.584575090142493 2.584575090142493 2.584575090142493 0 0.8807196863200843 1.6989700043360187 0.0 0.3494850021680094 {I|L}{I|L}[YN]{M(Oxidation (M))|F}PN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NP{M(Oxidation (M))|F}{[RE]|[WV]}S{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NP{M(Oxidation (M))|F}{[RE]|[WV]}TV;{I|L}{I|L}[YN]{M(Oxidation (M))|F}PGG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[WP][PG]{[NV]|[RG]}PN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GGP{M(Oxidation (M))|F}{[RE]|[WV]}S{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GGP{M(Oxidation (M))|F}{[RE]|[WV]}TV;[WP]{[RE]|[WV]}[RH]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[WP]{[MG]|[TS]}P[RH]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[WP][DG]{I|L}[RH]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.4679;3.2405;2.8571;2.6577;2.5881;2.4303;2.047;1.9282;1.8832;1.8135 -;-;-;-;-;-;-;-;-;- 555 1 0.971 62342.7 1.0 11568 5700 17251 HBL1_DMSO_200M_050219_1,17270 HBL1_DMSO_200M_050219_1,17270,FQNPFRSEL True True FQNPFRSEL 82.917648 569.286120593548 4264002.5 17251.0 ENSG00000073050|ENST00000262887|XRCC1 5.602617263793945 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17271 82.923 304.0 547960.0 25 0 251640.0 + 40654 VLEEELFGYT 10 142 600.2934112697652 1198.5722696063303 2 600.2938720583916 MULTI CID FTMS 0 0 0 17251 326841.53125 1.0 0 0.0 20 Unmodified _VLEEELFGYT_ REV__ENST00000527662.5_1_1:201453843-201459740:-|nuORF;REV__ENST00000533402.5_1_1:201459302-201459740:-|nuORF 10.073929032068715 0.6785112666868882 3 [{I|L}V]A 3 -1 23.557 0.0 0.0 1.9654 0.0 0.0 0.0 912.3580111436928 912.3580111436928 11.082268588648247 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]A 1.9654 - 514 1 0.971 121350.2 1.0 11569 5700 17251 HBL1_DMSO_200M_050219_1,17271 HBL1_DMSO_200M_050219_1,17271,VLEEELFGYT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17273 82.927 23.0 2957200.0 25 0 283810.0 + 44686 YPFKPPMI 8 87 496.7673432328521 991.5201335325042 2 496.7673522830009 MULTI CID FTMS 0 0 0 17272 1704142.125 0.1367960607465135 -7 0.5004959106445312 1 Unmodified _YPFKPPMI_ ENSG00000156587|ENST00000287156|UBE2L6 49.66892048692302 0.1408045912742846 3 YP{M(Oxidation (M))|F}KPPM{I|L} 8 0 + 68.658 0.0 0.0 6.9245 6.9245 93.912 0.0 0.0 0.0 54.67838187296806 11.490794246723937 11.490794246723937 25.007534981752784 0 0.7614393726401688 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y{I|L}MKPPM{I|L};YP{M(Oxidation (M))|F}[W{I|L}][PG]{I|L};YP{M(Oxidation (M))|F}[W{I|L}][PA]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}]MV{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPYV{[QN]|[E{I|L}]|[KN]};[YV]PPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y{I|L}MK[NG][PG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V]Q{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6.9245;4.4024;4.3458;4.1503;3.5166;2.8149;2.416;2.3396;2.225;1.6589 +;-;-;-;-;-;-;-;-;- + 206 + 1 0.97 56022.9 1.0 11570 5701 17272 HBL1_DMSO_200M_050219_1,17273 HBL1_DMSO_200M_050219_1,17273,YPFKPPMI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17274 82.933 295.0 683100.0 25 0 70816.0 + 18858 LASQHEEL 8 185 309.4904109860205 925.4494035582616 3 309.4902526736259 MULTI CID FTMS 0 0 0 17272 552175.9375 0.4385586996430002 15 -0.9267044067382812 2 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 3 {I|L}{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 1.7779 0.0 0.0 647.3055975388784 0.0 647.3055975388784 0.0 1.8495564253589687 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.7779 - 272 1 0.97 165057.8 1.0 11571 5701 17272 HBL1_DMSO_200M_050219_1,17274 HBL1_DMSO_200M_050219_1,17274,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17275 82.934 20.0 2984400.0 25 0 471630.0 + 12720 GVLTLIGSSI 10 91 480.2923743951735 958.570195857147 2 480.2927123904228 MULTI CID FTMS 0 0 0 17272 2555674.0 0.3153838208440752 -4 0.2828521728515625 3 Unmodified _GVLTLIGSSI_ REV__ENSG00000100342|ENST00000397278|APOL1;REV__nc|ENSG00000100342|O14791-2|APOL1;REV__nc|ENSG00000100342|O14791-3|APOL1 61.357469665136826 0.0330252915653943 3 [VG]{I|L}T{I|L}TS 7 -1 62.356 0.0 0.0 6.5051 0.0 0.0 0.0 284.16147938669707 284.16147938669707 42.66334779402399 0.0 0.0 0.0 0 1.0 1.6989700043360187 1.079689690656103 0.0 [VG]{I|L}T{I|L}TS 6.5051 - 586 1 0.97 51790.1 1.0 11572 5701 17272 HBL1_DMSO_200M_050219_1,17275 HBL1_DMSO_200M_050219_1,17275,GVLTLIGSSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17276 82.935 36.0 1557000.0 25 0 129790.0 + 26065 NMVDIIHSV 9 90 514.2658017405686 1026.517050547937 2 514.2656738162041 MULTI CID FTMS 0 0 0 17272 1242550.625 0.2436188433115284 -3 0.2142715454101562 4 Unmodified _NMVDIIHSV_ ENSG00000114054|ENST00000251654|PCCB;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;nc|ENSG00000114054|P05166-2|PCCB 92.8221339359638 0.0138398038803217 3 [MN]VD{I|L}{I|L}HSV 9 0 + 72.947 0.0 0.0 7.1063 7.1063 95.19 0.0 0.0 0.0 58.33281569033012 19.710536658395128 19.710536658395128 49.80327215271493 0 0.805462187404089 1.6989700043360187 1.885151878060192 0.0 + + [MN]VD{I|L}{I|L}HSV;[{M(Oxidation (M))|F}T][NP]{I|L}{I|L}HSV;[HS]V{I|L}[{M(Oxidation (M))|F}V]YY;[VS]H{I|L}[{M(Oxidation (M))|F}V]YY 7.1063;2.2546;1.1398;1.0626 +;-;-;- + 397 + 1 0.97 47088.6 1.0 11573 5701 17272 HBL1_DMSO_200M_050219_1,17276 HBL1_DMSO_200M_050219_1,17276,NMVDIIHSV True True NMVDIIHSV 82.935056 514.265673816204 84716720.0 17272.0 ENSG00000114054|ENST00000251654|PCCB;;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;;nc|ENSG00000114054|P05166-2|PCCB 8.095855553944906 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17277 82.939 195.0 1247400.0 25 0 151650.0 + 42773 VVIGGVVAV 9 76 812.5237878605279 811.5165113939279 1 812.5239745974541 MULTI CID FTMS 0 0 0 17272 1014457.75 0.0078914002729099 49 -4.062934875488281 5 Unmodified _VVIGGVVAV_ nc|ENSG00000165949|P40305-1|IFI27 109.1542453654746 0.0061419920015381 3 VVGG{I|L}VVAV 9 2 + 80.217 0.0 0.0 9.8848 9.8848 85.657 0.0 0.0 0.0 22.37643016799588 47.1322293751364 22.37643016799588 1.706962271689747 0 1.2134679910804405 1.5228787452803376 0.0 0.0 VVGG{I|L}VVAV;VVN{I|L}VVAV;VVGAVVVAV;VVQVVVAV;VV{I|L}NVVAV;VV{I|L}GGVVAV;VVGGV{I|L}VAV;VVGG{I|L}VAVV;VVG{I|L}GVVAV;VVGG{I|L}VVG{I|L} 9.8848;9.6745;9.5139;9.3035;9.2884;9.2253;9.2058;9.1581;9.0235;9.0235 -;-;-;-;-;+;-;-;-;- + 4503 1 0.97 171508.8 1.0 11574 5701 17272 HBL1_DMSO_200M_050219_1,17277 HBL1_DMSO_200M_050219_1,17277,VVIGGVVAV True True VVIGGVVAV 82.938821 812.523974597454 3468364.0 17272.0 nc|ENSG00000165949|P40305-1|IFI27 7.023441950480144 1.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17278 82.94 72.0 1338100.0 25 0 149170.0 + 45035 YPWGTVQV 8 120 475.2426077712239 948.4706626092476 2 475.2426940798759 MULTI CID FTMS 0 0 0 17272 1013674.1875 0.2125412127528394 -8 0.6475143432617188 6 Unmodified _YPWGTVQV_ ENSG00000125354|ENST00000394610|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6 52.69307289633392 0.1265801145616722 3 [WP]GTYVQV 8 2 + 48.599 0.0 0.0 5.1239 5.1239 80.679 0.0 0.0 0.0 15.978728531546537 8.226825097560422 8.226825097560422 5.211440694835829 0 0.5044321917401079 1.2218487496163564 1.274227503252014 0.0 [WP]GTYVQV;[WP]GTVYQV;[WP]GYTVQV;[WP]YGTVQV;{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}GTVQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WGTVQV;[AG]V{I|L}{[CP]|[EA]}YQV;{[QV]|[N{I|L}]|[RA]|[KV]}[{M(Oxidation (M))|F}E]TVQV;[AG]V[C(Carbamidomethyl (C))S][KT]QV;{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}V][QT]QV 5.1239;4.5744;4.4111;3.908;3.4392;3.1488;2.3654;1.649;1.6279;1.6206 -;-;-;-;-;+;-;-;-;- + 345 1 0.97 78471.8 1.0 11575 5701 17272 HBL1_DMSO_200M_050219_1,17278 HBL1_DMSO_200M_050219_1,17278,YPWGTVQV True True YPWGTVQV 82.940502 475.242694079876 71337712.0 17272.0 nc|ENSG00000125354|Q14141|SEPTIN6;;ENSG00000125354|ENST00000394610|SEPTIN6;;nc|ENSG00000125354|Q14141-4|SEPTIN6 4.702695926030477 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17279 82.945 219.0 901890.0 25 0 64496.0 + 31974 RVFIGNLNTL 10 151 573.8352425486172 1145.6559321640343 2 573.8350097537041 MULTI CID FTMS 0 0 0 17272 889869.25 0.3820978256190653 -3 0.2142715454101562 7 Unmodified _RVFIGNLNTL_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 114.6490535036381 0.0010974644385814 3 [RV]{M(Oxidation (M))|F}{I|L}GN{I|L}NT{I|L} 10 0 + 96.124 0.0 0.0 8.3903 8.3903 93.199 0.0 0.0 0.0 16.85169394249219 44.51011729223316 16.85169394249219 9.164539485499262 0 1.16944517631652 1.0 0.3807196863200844 1.4916440611282624 + + [RV]{M(Oxidation (M))|F}{I|L}GN{I|L}NT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GN{I|L}GGT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GGG{I|L}NT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GGG{I|L}GGT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GN[KA]E{I|L};[RV]{M(Oxidation (M))|F}{I|L}G[KA]NE{I|L};[RV]{M(Oxidation (M))|F}{I|L}GGG[KA]E{I|L};[RV]{M(Oxidation (M))|F}{I|L}G[KA]GGE{I|L};[RV]{M(Oxidation (M))|F}{I|L}[KQ]NE{I|L};{[HG]|PP}[HK]N{I|L}{I|L}NT{I|L} 8.3903;7.5903;7.5903;6.7936;5.6944;5.4044;4.8945;4.6045;4.5019;4.286 +;-;-;-;-;-;-;-;-;- + 3671 1 0.97 148062.0 1.0 11576 5701 17272 HBL1_DMSO_200M_050219_1,17279 HBL1_DMSO_200M_050219_1,17279,RVFIGNLNTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17280 82.949 228.0 646900.0 25 0 113290.0 24172 LYTTISGQRRL 11 108 654.3746504694897 1306.7347480057792 2 654.3743774294853 MULTI CID FTMS 0 0 0 17272 796379.0625 1.0 0 0.0 8 Unmodified _LYTTISGQRRL_ ENSG00000150961|ENST00000280551|SEC24D;nc|ENSG00000150961|O94855-2|SEC24D 2.9952420565917617 0.861016188266951 3 {I|L} 1 10 10.278 0.0 0.0 0.78651 0.0 0.0 1175.6397448092932 0.0 1175.6397448092932 0.0 5.431217836967139 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.78651 + + 22 + 1 0.97 124608.9 1.0 11577 5701 17272 HBL1_DMSO_200M_050219_1,17280 HBL1_DMSO_200M_050219_1,17280,LYTTISGQRRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17281 82.95 51.0 1091700.0 25 0 205880.0 -1 ALLETYCA 8 70 314.15333966184846 939.4381895857456 3 314.1532165408134 MULTI CID FTMS 0 0 0 17272 766674.6875 0.4291436246355437 -3 0.2142715454101562 9 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 20.453626601364224 0.6087503291685402 3 A{I|L}{I|L} 3 -1 48.94 0.0 0.0 5.2095 0.0 0.0 0.0 639.2103349894928 639.2103349894928 38.48258770979733 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 A{I|L}{I|L} 5.2095 + + 20 + 1 0.97 51113.2 1.0 11578 5701 17272 HBL1_DMSO_200M_050219_1,17281 HBL1_DMSO_200M_050219_1,17281,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17282 82.952 67.0 993090.0 25 0 97955.0 + 21127 LPAPPAPPVF 10 94 503.2904806091085 1004.5664082850168 2 503.2902404665947 MULTI CID FTMS 0 0 0 17272 639849.5 1.0 0 0.0 10 Unmodified _LPAPPAPPVF_ ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1 24.67388899826682 0.4143206957119831 3 S{I|L} 2 10 18.812 0.0 0.0 1.8727 0.0 0.0 786.4393311139216 0.0 786.4393311139216 0.0 0.3258344212375164 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 S{I|L} 1.8727 - 93 + 1 0.97 54702.8 1.0 11579 5701 17272 HBL1_DMSO_200M_050219_1,17282 HBL1_DMSO_200M_050219_1,17282,LPAPPAPPVF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17283 82.957 273.0 516230.0 25 0 39710.0 + 10909 GAILEDTLQAV 11 149 565.309558455257 1128.604563977314 2 565.3086425662041 MULTI CID FTMS 0 0 0 17272 544811.375 1.0 0 0.0 11 Unmodified _GAILEDTLQAV_ REV__ENSG00000135636|ENST00000410020|DYSF;REV__nc|ENSG00000135636|O75923-10|DYSF;REV__nc|ENSG00000135636|O75923-11|DYSF;REV__nc|ENSG00000135636|O75923-12|DYSF;REV__nc|ENSG00000135636|O75923-14|DYSF;REV__nc|ENSG00000135636|O75923-15|DYSF;REV__nc|ENSG00000135636|O75923-2|DYSF;REV__nc|ENSG00000135636|O75923-3|DYSF;REV__nc|ENSG00000135636|O75923-4|DYSF;REV__nc|ENSG00000135636|O75923-5|DYSF;REV__nc|ENSG00000135636|O75923-6|DYSF;REV__nc|ENSG00000135636|O75923-7|DYSF;REV__nc|ENSG00000135636|O75923-8|DYSF;REV__nc|ENSG00000135636|O75923-9|DYSF;REV__nc|ENSG00000135636|O75923|DYSF 43.85829265575387 0.1529608345840953 3 {NN|[MP]|[D{I|L}]|[EV]}TE{I|L}AG{I|L} 8 -1 40.404 0.0 0.0 3.58 0.0 0.0 0.0 313.1551980928015 313.1551980928015 17.96635348600395 0.0 0.0 0.0 0 0.2614393726401688 0.721246399047171 2.356666039983483 0.0 {NN|[MP]|[D{I|L}]|[EV]}TE{I|L}AG{I|L} 3.58 - 5106 1 0.97 109186.3 1.0 11580 5701 17272 HBL1_DMSO_200M_050219_1,17283 HBL1_DMSO_200M_050219_1,17283,GAILEDTLQAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17284 82.963 350.0 1147300.0 25 0 214630.0 + 10467 FTIRDLQRL 9 146 387.8963655277608 1160.6672671834822 3 387.8958007693291 MULTI CID FTMS 0 0 0 17272 547291.6875 0.6211661200546891 -1 0.0531997680664062 12 Unmodified _FTIRDLQRL_ ENSG00000149262|ENST00000534064|INTS4;ENST00000533180.1_1_11:77612465-77632469:-|nuORF 75.5705956163825 0.0189455680524554 3 {M(Oxidation (M))|F}T{I|L}RD{I|L}QR{I|L} 9 0 + 90.972 0.0 0.0 7.8379 7.8379 64.161 0.0 0.0 0.0 11.962724883926654 0.0 0.0 0.0 0 0.805462187404089 0.0 0.805462187404089 1.3539171939081174 + + {M(Oxidation (M))|F}T{I|L}RD{I|L}QR{I|L};{M(Oxidation (M))|F}T{I|L}RD{I|L}Q{I|L}R;{M(Oxidation (M))|F}{I|L}TRD{I|L}Q{I|L}R;{M(Oxidation (M))|F}{I|L}TRD{I|L}QR{I|L};{M(Oxidation (M))|F}T{I|L}RD{I|L}{I|L}QR;{M(Oxidation (M))|F}T{I|L}RD{I|L}[AG]{I|L}R;{M(Oxidation (M))|F}T{I|L}RD{I|L}[AG]R{I|L};{M(Oxidation (M))|F}{I|L}TRD{I|L}{I|L}QR;{M(Oxidation (M))|F}T{I|L}R{I|L}DQ{I|L}R;{M(Oxidation (M))|F}T{I|L}R{I|L}DQR{I|L} 7.8379;7.8379;7.4928;7.4928;7.0988;7.0446;7.0446;6.7537;6.7318;6.7318 +;-;-;-;-;-;-;-;-;- + 2153 + 1 0.97 316514.5 1.0 11581 5701 17272 HBL1_DMSO_200M_050219_1,17284 HBL1_DMSO_200M_050219_1,17284,FTIRDLQRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17285 82.97 394.0 513820.0 25 0 56306.0 + 25923 NLLPKLHIV 9 202 349.5625036851471 1045.6656816556413 3 349.5624572634697 MULTI CID FTMS 0 0 0 17272 443175.96875 0.5820599943721518 -3 0.2142715454101562 13 Unmodified _NLLPKLHIV_ ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1 21.74664581756881 0.2544899275067181 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V 9 0 + 41.277 0.0 0.0 3.9474 3.9474 79.452 0.0 0.0 0.0 22.37643016799588 7.983546364719302 7.983546364719302 7.983546364719302 0 0.2059771852360797 1.5228787452803376 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}HV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PKVH{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V[KP]H{I|L}{I|L} 3.9474;3.1839;2.6691;1.3322 +;-;-;- + 599 + 1 0.97 169907.8 1.0 11582 5701 17272 HBL1_DMSO_200M_050219_1,17285 HBL1_DMSO_200M_050219_1,17285,NLLPKLHIV False True NLLPKLHIV 82.970277 349.56245726347 17173972.0 17272.0 ENSG00000169504|ENST00000374379|CLIC4;;ENSG00000213719|ENST00000375784|CLIC1 3.323116143544515 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17286 82.976 300.0 602140.0 25 0 79043.0 24098 LYIQMEYCEK 10 147 660.3032373433291 1318.591921753458 2 660.3044921755791 MULTI CID FTMS 0 0 0 17272 408700.9375 0.4221885693378507 -3 0.2142715454101562 14 Unmodified _LYIQMEYCEK_ ENSG00000128829|ENST00000263791|EIF2AK4 30.63653989081413 0.2803493085145199 3 [Y{I|L}]{I|L}EQR 6 6 66.832 0.0 0.0 5.0685 0.0 0.0 0.0 513.1491251321532 513.1491251321532 35.68082561646179 0.0 0.0 0.0 0 1.8098943791441968 2.0 0.9247425010840048 0.8807196863200843 [Y{I|L}]{I|L}EQR 5.0685 - 2320 + 1 0.97 134981.3 1.0 11583 5701 17272 HBL1_DMSO_200M_050219_1,17286 HBL1_DMSO_200M_050219_1,17286,LYIQMEYCEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17287 82.982 318.0 541670.0 25 0 51040.0 + 42782 VVISSDGQFAL 11 198 568.303212880295 1134.5918728273898 2 568.3029662966728 MULTI CID FTMS 0 0 0 17272 384673.59375 1.0 0 0.0 15 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 22.736283301280096 0.5583477779825423 3 [WP]TSP[RH]A[{I|L}A] 10 8 + 30.918 0.0 0.0 2.7251 2.7251 77.579 0.0 0.0 0.0 6.739312702681062 9.103480558794182 6.739312702681062 9.102196946754042 0 0.3807196863200844 1.154901959985743 0.6643943297944485 0.3054621874040891 [WP]TSP[RH]A[{I|L}A];[WP]TS[WK]{M(Oxidation (M))|F}[{I|L}A];{[QN]|[E{I|L}]|[KN]}AASP[RH]A[{I|L}A];[WP]TA[HK][DP][{I|L}A];[{I|L}P]CASP[RH]A[{I|L}A];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N[TP]VV{M(Oxidation (M))|F}[{I|L}A];[WP]TA[HK][PA]{NN|[MP]|[D{I|L}]|[EV]};VV{I|L}QQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A[{I|L}A];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GG[TP]VV{M(Oxidation (M))|F}[{I|L}A];VV[WR][MN]{M(Oxidation (M))|F}[{I|L}A] 2.7251;1.9228;1.4571;1.2317;1.1424;1.132;1.0916;0.99109;0.96676;0.9174 -;-;-;-;-;-;-;-;-;- 2179 1 0.97 133572.1 1.0 11584 5701 17272 HBL1_DMSO_200M_050219_1,17287 HBL1_DMSO_200M_050219_1,17287,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17288 82.988 302.0 78185.0 25 0 9040.2 -1 0 56 819.1542846560478 0 819.1542846560478 PEAK CID FTMS 0 0 0 -1 0 16 3 E 1 -1 5.4846 0.0 0.0 0.33518 0.0 0.0 553.7590565173706 950.4484957330686 1504.2075522504392 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.33518 - 5 + 1 0.97 24608.1 1.0 11585 5701 17272 HBL1_DMSO_200M_050219_1,17288 HBL1_DMSO_200M_050219_1,17288, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17289 82.991 102.0 130840.0 25 0 10917.0 -1 0 39 679.9793411821527 0 679.9000121951103 PEAK CID FTMS 0 0 0 -1 0 17 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 0.97 18715.6 1.0 11586 5701 17272 HBL1_DMSO_200M_050219_1,17289 HBL1_DMSO_200M_050219_1,17289, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17290 82.997 342.0 434710.0 25 0 34134.0 + 2233 AQDFRVLYV 9 160 555.8009386584686 1109.587324383737 2 555.8015624880791 MULTI CID FTMS 0 0 0 17272 290756.25 0.9039851245955036 -1 0.0531997680664062 18 Unmodified _AQDFRVLYV_ ENSG00000108963|ENST00000263083|DPH1;ENST00000572819.6_1_17:1939773-1940251:+|nuORF;ENST00000576129.5_1_17:1936818-1940251:+|nuORF;nc|ENSG00000108963|Q9BZG8-1|DPH1;nc|ENSG00000108963|Q9BZG8-2|DPH1 70.33199760932243 0.0209706178985989 3 [QA]D{M(Oxidation (M))|F}RV{I|L}YV 9 0 + 79.502 0.0 0.0 7.165 7.165 94.05 0.0 0.0 0.0 18.879777552075595 43.68977527472496 18.879777552075595 19.732265901353344 0 1.9731975075880328 0.5528419686577808 0.3054621874040891 1.2312958898387063 + + [QA]D{M(Oxidation (M))|F}RV{I|L}YV;VVE{M(Oxidation (M))|F}RQAYV;{NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}RQAYV;[H{I|L}][HS]RQAYV;[{I|L}V]D{M(Oxidation (M))|F}RQAYV;VVE{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}{I|L}YV;VVE{M(Oxidation (M))|F}R[AG]AYV;{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}RV{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}R[AG]AYV 7.165;5.3867;5.3081;5.212;4.7791;4.5579;4.5568;4.5418;4.4793;4.4782 +;-;-;-;-;-;-;-;-;- + 1508 1 0.97 120510.0 1.0 11587 5701 17272 HBL1_DMSO_200M_050219_1,17290 HBL1_DMSO_200M_050219_1,17290,AQDFRVLYV True True AQDFRVLYV 82.9967 555.801562488079 4497055.0 17272.0 nc|ENSG00000108963|Q9BZG8-1|DPH1;;nc|ENSG00000108963|Q9BZG8-2|DPH1;;ENSG00000108963|ENST00000263083|DPH1;;ENST00000576129.5_1_17:1936818-1940251:+|nuORF;;ENST00000572819.6_1_17:1939773-1940251:+|nuORF 7.943143844604492 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17291 83.003 336.0 371760.0 25 0 19428.0 2124 APTWQGAKPVL 11 158 584.3284179568291 0 584.3284179568291 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _APTWQGAKPVL_ ENST00000392351.7_1_19:19049262-19051890:-|nuORF 16.149105407346934 0.3934762919021404 3 EAT 3 10 23.971 0.0 0.0 2.0547 0.0 0.0 582.3825306384643 280.10993372135005 862.4924643598144 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 1.2302046884880935 0.0 EAT 2.0547 - 295 + 1 0.97 99631.8 1.0 11588 5701 17272 HBL1_DMSO_200M_050219_1,17291 HBL1_DMSO_200M_050219_1,17291,APTWQGAKPVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17292 83.009 311.0 176330.0 25 0 6695.3 -1 0 107 854.0068847537041 0 854.0068847537041 PEAK CID FTMS 0 0 0 -1 0 20 3 VVD{I|L}AAA 7 -1 21.904 0.0 0.0 1.2839 0.0 0.0 870.5077137439331 193.0988253229125 1063.6065390668457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VVD{I|L}AAA 1.2839 - 1761 + 1 0.97 43317.6 1.0 11589 5701 17272 HBL1_DMSO_200M_050219_1,17292 HBL1_DMSO_200M_050219_1,17292, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17294 83.013 2.1 24819000.0 25 0 3735400.0 + 1625 ALMAAPLSL 9 68 451.7527689299804 901.4909849267608 2 451.7529785037041 MULTI CID FTMS 0 0 0 17293 30756140.0 0.3925704203491568 16 -0.9339599609375 1 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 49.66892048692302 0.0410958345688192 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 3 + 63.082 0.0 0.0 6.9975 6.9975 83.741 0.0 0.0 0.0 10.563025007672875 8.384767769392738 8.384767769392738 3.0102999566398125 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}ASP{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}AS{I|L}PA{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L} 6.9975;6.6636;5.8258;5.8004;5.4919;5.2545;4.6614;4.5269;4.4197;4.3659 -;-;-;-;-;-;-;-;-;- 267 1 0.97 44996.9 1.0 11590 5702 17293 HBL1_DMSO_200M_050219_1,17294 HBL1_DMSO_200M_050219_1,17294,ALMAAPLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17295 83.014 11.0 5271800.0 25 0 1300500.0 + 10913 GAIPLRVQL 9 77 483.8093717722081 965.6041906112164 2 483.8086120486259 MULTI CID FTMS 0 0 0 17293 3597917.0 0.5547194057982466 2 -0.2026596069335937 2 Unmodified _GAIPLRVQL_ REV__ENST00000329565.5_1_16:11770277-11770403:+|nuORF 42.09456458481378 0.0639583784996157 3 Q{I|L}Q{I|L} 4 -1 27.044 0.0 0.0 2.8007 0.0 0.0 465.3055897443375 0.0 465.3055897443375 0.0 6.637867533881359 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 Q{I|L}Q{I|L} 2.8007 - 112 1 0.97 50302.9 1.0 11591 5702 17293 HBL1_DMSO_200M_050219_1,17295 HBL1_DMSO_200M_050219_1,17295,GAIPLRVQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17296 83.015 7.4 8412300.0 25 0 858790.0 + 14649 IILEEGKEILV 11 79 628.3791880651661 1254.743823197132 2 628.3793823122978 MULTI CID FTMS 0 0 0 17293 4606362.0 1.0 0 0.0 3 Unmodified _IILEEGKEILV_ ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF 47.7319792270244 0.130190323903946 3 {I|L}{I|L}[NS]EE{I|L}{I|L}{I|L}{I|L}V 11 5 + 62.229 0.0 0.0 4.9595 4.9595 73.811 0.0 0.0 0.0 9.77166484306018 2.6722032235195314 2.6722032235195314 0.9691001300805624 0 0.9489700043360187 2.0 1.1549471895720984 0.0 {I|L}{I|L}[NS]EE{I|L}{I|L}{I|L}{I|L}V;{I|L}{I|L}E[NS]E{I|L}{I|L}{I|L}{I|L}V;{I|L}{I|L}{I|L}[NS]EE{I|L}{I|L}{I|L}V;{I|L}{I|L}[NS]EE{I|L}{I|L}V{I|L}{I|L};{I|L}{I|L}E[NS]E{I|L}{I|L}V{I|L}{I|L};{I|L}{I|L}[NS]E{I|L}E{I|L}{I|L}{I|L}V;{I|L}{I|L}EKGEE{I|L}{I|L}{I|L}V;{I|L}{I|L}{I|L}[NS]EE{I|L}V{I|L}{I|L};{I|L}{I|L}E[NS]{I|L}E{I|L}{I|L}{I|L}V;{I|L}{I|L}{I|L}[SG]GEE{I|L}{I|L}{I|L}V 4.9595;4.8823;4.8044;4.7465;4.6693;4.6596;4.6427;4.5915;4.5824;4.5709 -;-;-;-;-;-;-;-;-;- 2291 1 0.97 56041.8 1.0 11592 5702 17293 HBL1_DMSO_200M_050219_1,17296 HBL1_DMSO_200M_050219_1,17296,IILEEGKEILV False True IILEEGKEILV 83.014976 628.379382312298 49687780.0 17293.0 ENSG00000172757|ENST00000308162|CFL1;;ENST00000530945.1_1_11:65623404-65625570:-|nuORF 3.91892663637797 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17297 83.016 10.0 4818600.0 25 0 745910.0 + 44982 YPRQLESLI 9 76 559.8141901816448 1117.6138274300895 2 559.8139526247978 MULTI CID FTMS 0 0 0 17293 3580488.0 0.3622456330057514 -3 0.2349472045898437 4 Unmodified _YPRQLESLI_ ENSG00000104738|ENST00000649973|MCM4 26.268140514670165 0.1969607489560049 3 {I|L}ES{I|L}{I|L} 5 4 48.003 0.0 0.0 4.2951 0.0 0.0 544.2733631818375 0.0 544.2733631818375 0.0 34.17735320183944 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 + {I|L}ES{I|L}{I|L} 4.2951 + + 141 1 0.97 44147.3 1.0 11593 5702 17293 HBL1_DMSO_200M_050219_1,17297 HBL1_DMSO_200M_050219_1,17297,YPRQLESLI False True YPRQLESLI 83.016156 559.813952624798 223081056.0 17293.0 ENSG00000104738|ENST00000649973|MCM4 4.55788532892863 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17298 83.017 24.0 3830800.0 25 0 417830.0 + 3889 DALDKIRLI 9 116 528.8239744481274 1055.633395963055 2 528.8242675662041 MULTI CID FTMS 0 0 0 17293 1965042.25 0.0135230653389637 13 -0.7936477661132812 5 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 43.9818466556824 0.0535980856389242 3 DA{I|L}DK{I|L}R{I|L}{I|L} 9 0 + 85.957 0.0 0.0 8.1427 8.1427 96.744 0.0 0.0 0.0 51.04909263460896 14.933787369250169 14.933787369250169 25.902595205268945 0 1.9124379954164592 1.6989700043360187 0.0 0.0 + + DA{I|L}DK{I|L}R{I|L}{I|L};{I|L}DADK{I|L}R{I|L}{I|L} 8.1427;5.689 +;- + 156 + 1 0.97 75994.2 1.0 11594 5702 17293 HBL1_DMSO_200M_050219_1,17298 HBL1_DMSO_200M_050219_1,17298,DALDKIRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17299 83.019 61.0 1615200.0 25 0 156030.0 -1 0 77 915.4426033316182 1828.8706537300363 2 915.9461547732352 MULTI CID FTMS 0 0 0 17293 1512399.5 1.0 0 0.0 6 3 {M(Oxidation (M))|F}ANQQAEEVC(Carbamidomethyl (C)){I|L} 11 -1 68.679 0.0 0.0 3.7553 0.0 0.0 521.280442714227 0.0 521.280442714227 0.0 58.22142390405386 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}ANQQAEEVC(Carbamidomethyl (C)){I|L} 3.7553 - 981 + 1 0.97 69006.9 1.0 11595 5702 17293 HBL1_DMSO_200M_050219_1,17299 HBL1_DMSO_200M_050219_1,17299, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17300 83.02 20.0 1211000.0 25 0 116470.0 + 42771 VVIGADTIVTV 11 50 543.8239999020195 1085.633446870839 2 543.8238403201103 MULTI CID FTMS 0 0 0 17293 1392103.125 0.5809228853829534 1 -0.0763320922851562 7 Unmodified _VVIGADTIVTV_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 18.1463463914782 0.6576820063886638 3 {NN|[MP]|[D{I|L}]|[EV]}QT 4 8 25.49 0.0 0.0 2.3479 0.0 0.0 0.0 625.3936146777327 625.3936146777327 7.04628427264403 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}QT 2.3479 - 36 1 0.97 26178.5 1.0 11596 5702 17293 HBL1_DMSO_200M_050219_1,17300 HBL1_DMSO_200M_050219_1,17300,VVIGADTIVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17301 83.024 209.0 719510.0 25 0 132180.0 -1 LPCDICGPIL 10 159 579.2881166872413 1156.5616804412823 2 579.2887451052666 MULTI CID FTMS 0 0 0 17293 1000805.0625 0.1574671862417675 3 -0.2549362182617187 8 2 Carbamidomethyl (C) _LPC(Carbamidomethyl (C))DIC(Carbamidomethyl (C))GPIL_ ENSG00000213762|ENST00000396161|ZNF134 42.09456458481378 0.1354489350322421 3 [{I|L}T]{M(Oxidation (M))|F}ST{[{M(Oxidation (M))|F}D]|MM}T{I|L}{I|L} 10 -1 + 64.747 0.0 0.0 5.5982 5.5982 83.644 0.0 0.0 0.0 7.117129053615088 15.664704126328246 7.117129053615088 6.549019599857431 0 0.9247425010840048 2.0 1.5356668758921828 0.0 [{I|L}T]{M(Oxidation (M))|F}ST{[{M(Oxidation (M))|F}D]|MM}T{I|L}{I|L};[{I|L}T]{M(Oxidation (M))|F}SM[MT]T{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}HPC[MT]T{I|L}{I|L};[{I|L}T]{M(Oxidation (M))|F}SM[W{M(Oxidation (M))|F}]{I|L}{I|L};[{I|L}P]HEC[MT]T{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}C[MT]T{I|L}{I|L};[{I|L}T]{M(Oxidation (M))|F}STPE{[{M(Oxidation (M))|F}C]|[YS]}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EC[MT]T{I|L}{I|L};[{I|L}T]{M(Oxidation (M))|F}SPTE{[{M(Oxidation (M))|F}C]|[YS]}{I|L};{[QN]|[E{I|L}]|[KN]}HP{I|L}CT[MT]{I|L} 5.5982;5.032;4.9828;4.7275;4.539;3.8845;3.8452;3.7532;3.731;3.7177 -;-;-;-;-;-;-;-;-;- 3598 1 0.97 116294.2 1.0 11597 5702 17293 HBL1_DMSO_200M_050219_1,17301 HBL1_DMSO_200M_050219_1,17301,LPCDICGPIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17302 83.028 212.0 1296300.0 25 0 124450.0 -1 0 150 670.672931261179 2008.996964383737 3 670.6724731326103 MULTI CID FTMS 0 0 0 17293 942922.9375 0.4721372151391679 -2 0.1385116577148437 9 3 {[TV]|[{I|L}S]}Q[HT]W{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}QS{I|L} 17 -1 + 108.88 0.0 0.0 5.4198 5.4198 57.124 0.0 0.0 0.0 1.4916623986031396 15.221260677816788 1.4916623986031396 0.0 0 1.0356668758921828 1.6989700043360187 0.8252574989159953 1.7786596949921218 {[TV]|[{I|L}S]}Q[HT]W{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}QS{I|L};{[TV]|[{I|L}S]}Q[HT]W{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}KS{I|L};[H{I|L}][NP]{I|L}N[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}QS{I|L};[H{I|L}][NP]{I|L}N[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}KS{I|L};{[QS]|[NT]}{I|L}[HT]W{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}KS{I|L};{[QS]|[NT]}{I|L}[HT]W{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}QS{I|L};[{I|L}T]N[HT]W{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}QS{I|L};[{I|L}T]N[HT]W{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}KS{I|L};[Q{I|L}]S[HT]W{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}QS{I|L};[Q{I|L}]S[HT]W{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}KS{I|L} 5.4198;5.4198;5.3455;5.3455;4.9332;4.9332;4.6512;4.6512;4.6324;4.6324 -;-;-;-;-;-;-;-;-;- 9539 1 0.97 211574.6 1.0 11598 5702 17293 HBL1_DMSO_200M_050219_1,17302 HBL1_DMSO_200M_050219_1,17302, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17303 83.032 231.0 1325800.0 25 0 102610.0 + 31919 RVADDVFTL 9 187 518.2770230457324 1034.5394931582648 2 518.2779418826103 MULTI CID FTMS 0 0 0 17293 904605.3125 0.5946079462450229 -2 0.1385116577148437 10 Unmodified _RVADDVFTL_ ENSG00000078246|ENST00000448120|TULP3;nc|ENSG00000078246|O75386-2|TULP3 62.57269311338072 0.0246576765497938 3 {[VA]|[{I|L}G]}[RD]DV{M(Oxidation (M))|F}T{I|L} 9 2 + 72.109 0.0 0.0 6.9702 6.9702 81.479 0.0 0.0 0.0 1.7512841890908248 16.478174818886373 1.7512841890908248 1.7512841890908248 0 0.8807196863200843 1.2218487496163564 0.9802046884880936 1.0189301784845295 {[VA]|[{I|L}G]}[RD]DV{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}[WQ]V{M(Oxidation (M))|F}T{I|L};{[DA]|[EG]}[RV]DV{M(Oxidation (M))|F}T{I|L};[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DV{M(Oxidation (M))|F}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}DV{M(Oxidation (M))|F}T{I|L};[{I|L}P][KC]DV{M(Oxidation (M))|F}T{I|L};{[QG]|[NA]}[KQ]DV{M(Oxidation (M))|F}T{I|L};[KP]{[ES]|[DT]|[{I|L}C]}DV{M(Oxidation (M))|F}T{I|L};{[VA]|[{I|L}G]}GQ[NS]V{M(Oxidation (M))|F}T{I|L};{[ET]|[MV]}Q[TP]V{M(Oxidation (M))|F}T{I|L} 6.9702;6.8009;6.221;6.0637;5.9495;5.8361;5.5542;5.3398;4.8581;4.6975 -;-;-;-;-;-;-;-;-;- 2938 1 0.97 232277.0 1.0 11599 5702 17293 HBL1_DMSO_200M_050219_1,17303 HBL1_DMSO_200M_050219_1,17303,RVADDVFTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17304 83.037 267.0 715550.0 25 0 40587.0 + 11506 GILQKECTQTF 11 159 634.3192064214766 1266.623859909753 2 634.3195068240166 MULTI CID FTMS 0 0 0 17293 589587.9375 0.7210308745047664 -9 0.7328262329101562 11 Unmodified _GILQKECTQTF_ REV__ENSG00000134627|ENST00000299001|PIWIL4;REV__nc|ENSG00000134627|Q7Z3Z4-2|PIWIL4;REV__nc|ENSG00000134627|Q7Z3Z4-3|PIWIL4 53.40400417844725 0.0987786977674846 3 [DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F} 10 -1 + 73.496 0.0 0.0 5.8025 5.8025 79.413 0.0 0.0 0.0 2.719169965091225 16.53212513775344 2.719169965091225 2.719169965091225 0 1.2614393726401687 0.958607314841775 1.2179001828205482 0.3252574989159953 [DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};{[VA]|[{I|L}G]}A[TA][MN]{I|L}TQT{M(Oxidation (M))|F};{[VA]|[{I|L}G]}A{I|L}[{M(Oxidation (M))|F}E]{I|L}EQT{M(Oxidation (M))|F};[Q{I|L}][TA][MN]{I|L}TQT{M(Oxidation (M))|F};[Q{I|L}]{I|L}[{M(Oxidation (M))|F}E]{I|L}EQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};[QT][{I|L}A][MN]{I|L}TQT{M(Oxidation (M))|F};[AG]T[{I|L}A][MN]{I|L}TQT{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}T[AG]T{M(Oxidation (M))|F};[AG]{I|L}[TA][MN]{I|L}TQT{M(Oxidation (M))|F} 5.8025;5.5878;5.519;5.1743;5.1084;5.008;4.9483;4.9109;4.8222;4.822 -;-;-;-;-;-;-;-;-;- 6892 1 0.97 145358.9 1.0 11600 5702 17293 HBL1_DMSO_200M_050219_1,17304 HBL1_DMSO_200M_050219_1,17304,GILQKECTQTF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17305 83.04 104.0 449430.0 25 0 69714.0 14216 IDMSCLGAASL 11 76 360.8395869065965 1079.4969313199897 3 360.8394653201103 MULTI CID FTMS 0 0 0 17293 499681.75 0.8452455474500091 -2 0.1385116577148437 12 Unmodified _IDMSCLGAASL_ ENSG00000175066|ENST00000392993|GK5;ENST00000492097.5_1_3:141882642-141900319:-|nuORF;nc|ENSG00000175066|Q6ZS86-3|GK5 12.240655878213236 0.7805268987462184 3 {I|L}V 2 10 20.969 0.0 0.0 1.9425 0.0 0.0 0.0 864.3231391674809 864.3231391674809 3.9574652759516127 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 1.9425 - 24 + 1 0.97 45067.3 1.0 11601 5702 17293 HBL1_DMSO_200M_050219_1,17305 HBL1_DMSO_200M_050219_1,17305,IDMSCLGAASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17306 83.045 289.0 257330.0 25 0 66580.0 + -1 KLRKFQKFMSL 11 99 721.4219412597154 1440.8293295862306 2 721.4217407107353 MULTI CID FTMS 0 0 0 17293 477492.15625 0.644841721674651 -6 0.4228134155273437 13 Oxidation (M) _KLRKFQKFM(Oxidation (M))SL_ REV__ENSG00000196664|ENST00000380659|TLR7 1.3295316138638542 0.8688751186870782 3 {I|L} 1 -1 10.969 0.0 0.0 0.7613 0.0 0.0 1309.7341127666978 0.0 1309.7341127666978 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.7613 + + 127 + 1 0.97 62308.4 1.0 11602 5702 17293 HBL1_DMSO_200M_050219_1,17306 HBL1_DMSO_200M_050219_1,17306,KLRKFQKFMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17307 83.051 360.0 936660.0 25 0 78510.0 + + 22865 SIFPDFSKA 9 222 506.2613917517457 0 506.2605468630791 PEAK CID FTMS 0 0 0 17293 372036.625 1.0 0 0.0 14 Unmodified _LSAPVPCDPI_ ENSG00000112149|ENST00000379153|CD83 19.256988751693697 0.3042552096208299 3 {M(Oxidation (M))|F}PD 3 -1 15.049 0.0 0.0 1.4893 0.0 0.0 200.1170699565712 448.2208651178344 648.3379350744056 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}PD 1.4893 - 1272 + 1 0.97 259882.2 1.0 11603 5702 17293 HBL1_DMSO_200M_050219_1,17307 HBL1_DMSO_200M_050219_1,17307,LSAPVPCDPI False False SIFPDFSKA 83.051343 506.260546863079 13837392.0 17293.0 ENSG00000112149|ENST00000379153|CD83 4.706138928731282 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17308 83.058 346.0 353410.0 25 0 40917.0 7318 EEVVLWLLRLQ 11 142 699.4086727025749 1396.8027924719495 2 699.4064208865166 MULTI CID FTMS 0 0 0 17293 216216.09375 0.2156142470071508 10 -0.6789703369140625 15 Unmodified _EEVVLWLLRLQ_ ENSG00000205089|ENST00000378731|CCNI2;nc|ENSG00000205089|Q6ZMN8-2|CCNI2;nc|ENSG00000205089|Q6ZMN8-3|CCNI2 5.731851221503515 0.8481046878870278 3 [WP]T 3 10 26.349 0.0 0.0 1.8864 0.0 0.0 0.0 1009.601687085484 1009.601687085484 2.689067834989636 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2396518287104437 0.0 [WP]T 1.8864 - 848 1 0.97 94673.6 1.0 11604 5702 17293 HBL1_DMSO_200M_050219_1,17308 HBL1_DMSO_200M_050219_1,17308,EEVVLWLLRLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17309 83.065 384.0 283000.0 25 0 29636.0 + 28875 QALLSWVVFM 10 143 597.3210058973141 0 597.3209106326103 PEAK CID FTMS 0 0 0 17293 183055.984375 0.6566937331721846 -3 0.2349472045898437 16 Unmodified _QALLSWVVFM_ REV__ENST00000498553.5_1_1:154923815-154923860:-|nuORF 14.838274106304384 0.3381107837965078 3 P{I|L}VE 4 -1 23.175 0.0 0.0 1.9432 0.0 0.0 467.1822631273768 284.1736849420532 751.3559480694299 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L}VE 1.9432 - 349 + 1 0.97 85694.0 1.0 11605 5702 17293 HBL1_DMSO_200M_050219_1,17309 HBL1_DMSO_200M_050219_1,17309,QALLSWVVFM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17310 83.074 558.0 261380.0 25 0 18270.0 + 10105 FPVDPRKVLI 10 162 395.2445266131067 1182.71175043952 3 395.2442199587822 MULTI CID FTMS 0 0 0 17293 184826.1875 1.0 0 0.0 17 Unmodified _FPVDPRKVLI_ ENSG00000136636|ENST00000259154|KCTD3;nc|ENSG00000136636|Q9Y597-2|KCTD3 14.95716135407024 0.5965753712453801 3 [VP]D{M(Oxidation (M))|F} 4 7 30.406 0.0 0.0 2.5709 0.0 0.0 0.0 721.4712440489885 721.4712440489885 7.390690719683093 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [VP]D{M(Oxidation (M))|F} 2.5709 - 111 1 0.97 117475.4 1.0 11606 5702 17293 HBL1_DMSO_200M_050219_1,17310 HBL1_DMSO_200M_050219_1,17310,FPVDPRKVLI False True FPVDPRKVLI 83.074289 395.244219958782 2830871.75 17293.0 nc|ENSG00000136636|Q9Y597-2|KCTD3;;ENSG00000136636|ENST00000259154|KCTD3 2.859212835629781 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17311 83.085 528.0 350030.0 25 0 22669.0 + 45391 YTAPRKKPIPK 11 171 433.6016233842252 1297.7830407528756 3 433.6011535525322 MULTI CID FTMS 0 0 0 17293 171971.921875 0.7626960106800419 2 -0.2026596069335937 18 Unmodified _YTAPRKKPIPK_ REV__ENSG00000205038|ENST00000378402|PKHD1L1 5.731851221503515 0.8481046878870278 3 [YT][{M(Oxidation (M))|F}T]{I|L}E 6 -1 20.876 0.0 0.0 1.6086 0.0 0.0 0.0 540.4121050441444 540.4121050441444 2.9303956469514496 0.0 0.0 0.0 0 0.0 2.0 0.9749073637206092 0.0 [YT][{M(Oxidation (M))|F}T]{I|L}E 1.6086 - 421 1 0.97 153900.0 1.0 11607 5702 17293 HBL1_DMSO_200M_050219_1,17311 HBL1_DMSO_200M_050219_1,17311,YTAPRKKPIPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17313 83.089 1.7 15385000.0 25 0 1389800.0 + 28763 PWTLALENV 9 61 521.7820976720893 1041.5496424109783 2 521.7827026247978 MULTI CID FTMS 0 0 0 17312 23298712.0 0.5555368193916245 1 -0.1263275146484375 1 Unmodified _PWTLALENV_ ENSG00000130234|ENST00000252519|ACE2;nc|ENSG00000130234|Q9BYF1-3|ACE2 23.1484247019978 0.2366544122328345 3 [WP]TA{I|L}EQVV 9 3 + 64.499 0.0 0.0 6.1926 6.1926 81.31 0.0 0.0 0.0 20.15794267183232 43.52954353761518 20.15794267183232 3.0102999566398125 0 0.5 1.3010299956639813 0.7614393726401688 0.0 [WP]TA{I|L}EQVV;[WP]TAE{I|L}QVV;[WP]TAEQ{I|L}VV;[WP]T{I|L}AEQVV;[WP]TA{I|L}E[AG]VV;[WP]TAE{I|L}[AG]VV;[WP]{I|L}TAEQVV;[WP]TAE[AG]{I|L}VV;[WP]T{I|L}AE[AG]VV;[WP]{I|L}TAE[AG]VV 6.1926;5.9035;5.7345;5.538;5.3085;5.0195;4.8835;4.8504;4.6539;3.9994 -;-;-;-;-;-;-;-;-;- 211 1 0.97 32105.5 1.0 11608 5703 17312 HBL1_DMSO_200M_050219_1,17313 HBL1_DMSO_200M_050219_1,17313,PWTLALENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17314 83.09 15.0 2954900.0 25 0 299210.0 + 15270 IPHPLIMGV 9 70 488.7861152296468 975.5576775260936 2 488.7862121462822 MULTI CID FTMS 0 0 0 17312 3267362.25 0.4599357920864623 2 -0.1786041259765625 2 Unmodified _IPHPLIMGV_ ENSG00000166200|ENST00000388901|COPS2;ENST00000559016.1_1_15:49426483-49429634:-|nuORF;nc|ENSG00000166200|P61201-2|COPS2 56.04830969593885 0.0282699710924866 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P{I|L}{I|L}MR 8 4 + 63.448 0.0 0.0 6.5038 6.5038 80.39 0.0 0.0 0.0 1.775625438107582 1.775625438107582 1.775625438107582 1.775625438107582 0 0.8807196863200843 0.0 0.3494850021680094 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P{I|L}{I|L}MR;[{I|L}P]HP{I|L}{I|L}MGV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}P{I|L}MR;[{I|L}P]H{I|L}P{I|L}MGV;[{I|L}P]{I|L}HP{I|L}MGV;{[MG]|[TS]}KK{I|L}{I|L}MGV 6.5038;6.3218;6.1952;6.0132;5.7047;3.2466 -;+;-;-;-;- + 108 1 0.97 38376.0 1.0 11609 5703 17312 HBL1_DMSO_200M_050219_1,17314 HBL1_DMSO_200M_050219_1,17314,IPHPLIMGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17315 83.091 16.0 3282800.0 25 0 601630.0 + 14402 IFIDRDPTVF 10 45 611.8277415857054 1221.6409302382108 2 611.8275634646416 MULTI CID FTMS 0 0 0 17312 1991088.125 0.5254369777653806 1 -0.1263275146484375 3 Unmodified _IFIDRDPTVF_ ENSG00000160410|ENST00000291842|SHKBP1;ENST00000595523.5_1_19:41083305-41084039:+|nuORF;ENST00000598558.5_1_19:41083239-41086365:+|nuORF;ENST00000600552.5_1_19:41083005-41084032:+|nuORF;nc|ENSG00000160410|Q8TBC3-2|SHKBP1 43.77239144664712 0.1177314611616471 3 {I|L}{M(Oxidation (M))|F}{I|L} 3 7 30.445 0.0 0.0 2.4922 0.0 0.0 0.0 845.3790987604124 845.3790987604124 9.744237387763093 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}{M(Oxidation (M))|F}{I|L} 2.4922 + + 19 + 1 0.97 47875.5 1.0 11610 5703 17312 HBL1_DMSO_200M_050219_1,17315 HBL1_DMSO_200M_050219_1,17315,IFIDRDPTVF True True IFIDRDPTVF 83.091311 611.827563464642 112509984.0 17312.0 ENST00000600552.5_1_19:41083005-41084032:+|nuORF;;ENST00000595523.5_1_19:41083305-41084039:+|nuORF;;ENSG00000160410|ENST00000291842|SHKBP1;;nc|ENSG00000160410|Q8TBC3-2|SHKBP1;;ENST00000598558.5_1_19:41083239-41086365:+|nuORF 7.114895661671956 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17316 83.092 31.0 2181800.0 25 0 203390.0 -1 VVSGCTVDML 10 80 540.7562643190413 1079.4979757048825 2 540.7562133669853 MULTI CID FTMS 0 0 0 17312 1293530.75 0.3452721889996653 4 -0.352203369140625 4 Carbamidomethyl (C) _VVSGC(Carbamidomethyl (C))TVDML_ ENSG00000128268|ENST00000341184|MGAT3 10.823927491677226 0.6659270209832991 3 VV 2 -1 19.464 0.0 0.0 1.8031 0.0 0.0 0.0 878.3380733354813 878.3380733354813 0.0784749426325959 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV 1.8031 + + 64 + 1 0.97 57423.9 1.0 11611 5703 17312 HBL1_DMSO_200M_050219_1,17316 HBL1_DMSO_200M_050219_1,17316,VVSGCTVDML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17317 83.095 117.0 1354600.0 25 0 101300.0 + + 17037 KLAPPLVTL 9 138 476.32097924230936 950.6274055514187 2 476.3157836794853 MULTI CID FTMS 0 0 0 17312 915452.4375 0.0363771642656358 -6 0.4444961547851562 5 Unmodified _KKLLHVTL_ nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000006125|P63010|AP2B1;ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000100280|Q10567-3|AP1B1;ENSG00000006125|ENST00000610402|AP2B1;ENST00000441188.2_1_X:92478653-92479352:-|nuORF 36.04419817259434 0.3004715606373109 3 [{I|L}A]KPP{I|L}VT 8 -1 49.706 0.0 0.0 5.2288 0.0 0.0 0.0 128.08416721317568 128.08416721317568 3.371671727695805 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3807196863200844 0.5283773187068795 [{I|L}A]KPP{I|L}VT 5.2288 - 761 1 0.97 122977.4 1.0 11612 5703 17312 HBL1_DMSO_200M_050219_1,17317 HBL1_DMSO_200M_050219_1,17317,KKLLHVTL False False KLAPPLVTL 83.094928 476.315783679485 7559766.5 17312.0 nc|ENSG00000100280|Q10567-2|AP1B1;;nc|ENSG00000006125|P63010|AP2B1;;ENSG00000100280|ENST00000357586|AP1B1;;nc|ENSG00000100280|Q10567-4|AP1B1;;nc|ENSG00000006125|P63010-3|AP2B1;;nc|ENSG00000100280|Q10567-3|AP1B1;;ENSG00000006125|ENST00000610402|AP2B1;;ENST00000441188.2_1_X:92478653-92479352:-|nuORF 5.282168388366699 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17318 83.1 273.0 626440.0 25 0 147080.0 + 19563 LFRTKIKNVY 10 133 641.3851135857544 1280.7556742383088 2 641.3853027224541 MULTI CID FTMS 0 0 0 17312 756706.8125 0.5339077682104778 1 -0.1263275146484375 6 Unmodified _LFRTKIKNVY_ REV__ENSG00000127511|ENST00000248054|SIN3B;REV__nc|ENSG00000127511|O75182-3|SIN3B;REV__nc|ENSG00000127511|O75182|SIN3B 3.944395688203298 0.708391353636983 3 {I|L} 1 -1 9.0908 0.0 0.0 0.7098 0.0 0.0 1149.6604269011978 0.0 1149.6604269011978 0.0 3.606231995235856 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.7098 + + 62 + 1 0.97 133205.6 1.0 11613 5703 17312 HBL1_DMSO_200M_050219_1,17318 HBL1_DMSO_200M_050219_1,17318,LFRTKIKNVY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17319 83.102 66.0 616840.0 25 0 93018.0 + 24676 MLYQLILLKF 10 64 427.9259532253952 1280.7560302763857 3 427.9256774783134 MULTI CID FTMS 0 0 0 17312 570142.875 0.5733422321571052 2 -0.1786041259765625 7 Unmodified _MLYQLILLKF_ REV__ENSG00000173821|ENST00000582970|RNF213;REV__nc|ENSG00000173821|Q63HN8-4|RNF213;REV__nc|ENSG00000173821|Q63HN8|RNF213 0.4583401331227399 0.7245164002484112 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 0.97 41139.3 1.0 11614 5703 17312 HBL1_DMSO_200M_050219_1,17319 HBL1_DMSO_200M_050219_1,17319,MLYQLILLKF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17320 83.108 328.0 544280.0 25 0 65602.0 + 22405 LPTAHLLCTM 10 165 550.284268894914 1098.553984856628 2 550.2858764529228 MULTI CID FTMS 0 0 0 17312 536297.75 0.6425066249788377 -1 0.0763320922851562 8 Unmodified _LPTAHLLCTM_ ENST00000328434.7_1_17:40949831-40949894:-|nuORF 43.85829265575387 0.1168243637355526 3 {I|L}{I|L}{I|L}{[MG]|[TS]}S{I|L} 7 7 47.039 0.0 0.0 4.2819 0.0 0.0 353.10331876421486 0.0 353.10331876421486 0.0 14.722623253101226 0.0 0.0 0 1.2887254899964358 0.0 1.673877368056628 0.0 {I|L}{I|L}{I|L}{[MG]|[TS]}S{I|L} 4.2819 - 1761 + 1 0.97 139166.9 1.0 11615 5703 17312 HBL1_DMSO_200M_050219_1,17320 HBL1_DMSO_200M_050219_1,17320,LPTAHLLCTM True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17321 83.114 342.0 802740.0 25 0 138180.0 + 16301 IWPNARISVM 10 165 593.8225332703377 1185.6305136074752 2 593.8234130740166 MULTI CID FTMS 0 0 0 17312 490077.53125 0.4153765719966271 3 -0.3024444580078125 9 Unmodified _IWPNARISVM_ ENSG00000131844|ENST00000340941|MCCC2;nc|ENSG00000131844|Q9HCC0-2|MCCC2 55.50274090549119 0.048383292844968 3 {I|L}WPNC{M(Oxidation (M))|F} 6 5 72.172 0.0 0.0 6.0872 0.0 0.0 0.0 422.27179895572505 422.27179895572505 25.97113088104781 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 1.066901560044258 {I|L}WPNC{M(Oxidation (M))|F} 6.0872 - 1963 + 1 0.97 202745.0 1.0 11616 5703 17312 HBL1_DMSO_200M_050219_1,17321 HBL1_DMSO_200M_050219_1,17321,IWPNARISVM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17322 83.121 411.0 324200.0 25 0 39692.0 -1 0 114 665.5052644522708 3986.987927914025 6 665.8401977419853 MULTI CID FTMS 0 0 0 17312 286042.3125 0.4672574584484671 -1 0.0763320922851562 10 3 {NN|[MP]|[D{I|L}]|[EV]}[YQ]ETVS{I|L} 9 -1 57.202 0.0 0.0 1.4347 0.0 0.0 0.0 2935.4444091335195 2935.4444091335195 36.62971259689115 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.2614393726401687 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}[YQ]ETVS{I|L} 1.4347 - 639 1 0.97 103935.6 1.0 11617 5703 17312 HBL1_DMSO_200M_050219_1,17322 HBL1_DMSO_200M_050219_1,17322, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17323 83.124 145.0 424780.0 25 0 36511.0 -1 IEQMETYSL 9 108 565.2592988796642 0 565.2586547732353 PEAK CID FTMS 0 0 0 17312 269808.28125 1.0 0 0.0 11 Oxidation (M) _IEQM(Oxidation (M))ETYSL_ ENSG00000144820|ENST00000273352|ADGRG7 21.74664581756881 0.185237546287679 3 QD 2 -1 6.9948 0.0 0.0 0.61983 0.0 0.0 800.3292534216347 82.06703363590077 882.3962870575355 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2059771852360797 0.3252574989159953 QD 0.61983 - 111 + 1 0.97 56255.3 1.0 11618 5703 17312 HBL1_DMSO_200M_050219_1,17323 HBL1_DMSO_200M_050219_1,17323,IEQMETYSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17324 83.132 446.0 601690.0 25 0 43659.0 + 24304 MCNLRVEPI 9 231 537.7748780403971 1073.535203147594 2 537.7759277224541 MULTI CID FTMS 0 0 0 17312 260949.125 0.7576450464969188 2 -0.1786041259765625 12 Unmodified _MCNLRVEPI_ REV__ENSG00000133958|ENST00000695012|UNC79;REV__nc|ENSG00000133958|Q9P2D8-2|UNC79;REV__nc|ENSG00000133958|Q9P2D8-3|UNC79;REV__nc|ENSG00000133958|Q9P2D8|UNC79 20.453626601364224 0.2830276176381075 3 [H{I|L}][HK]{I|L}PC 7 -1 37.853 0.0 0.0 3.526 0.0 0.0 0.0 242.03871812245657 242.03871812245657 14.842482994902475 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.2887254899964357 [H{I|L}][HK]{I|L}PC 3.526 - 2235 1 0.97 204517.4 1.0 11619 5703 17312 HBL1_DMSO_200M_050219_1,17324 HBL1_DMSO_200M_050219_1,17324,MCNLRVEPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17325 83.14 470.0 420820.0 25 0 60106.0 + 12025 GQAEPESVLLV 11 204 571.3092834216933 1140.6040139101865 2 571.3099853396416 MULTI CID FTMS 0 0 0 17312 214009.046875 0.1410533467240468 -3 0.21484375 13 Unmodified _GQAEPESVLLV_ ENSG00000127054|ENST00000435064|INTS11;ENST00000461514.6_1_1:1248044-1249114:-|nuORF;ENST00000470030.6_1_1:1247241-1248711:-|nuORF;ENST00000478641.5_1_1:1248044-1248711:-|nuORF;ENST00000485710.5_1_1:1247522-1249186:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 57.24910588100465 0.0803095280301687 3 [EP]SV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}V 10 7 + 52.117 0.0 0.0 4.5692 4.5692 71.507 0.0 0.0 0.0 10.132579843699917 12.078343878162343 10.132579843699917 0.4139268515822607 0 0.4247425010840047 0.5376020021010439 1.690991713220591 0.0 [EP]SV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}V;[EP]SV{I|L}{[CP]|[EA]}GQ{I|L}V;[EP]SVAE{[QG]|[NA]}{I|L}{I|L}V;[EP]SVAN{[CP]|[EA]}{I|L}{I|L}V;[EP]SVAE{I|L}GQ{I|L}V;[EP]SV{I|L}{[QG]|[NA]}{[CP]|[EA]}{I|L}V;[EP]SV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]{I|L}V;[EP]SV{I|L}{[CP]|[EA]}G[AG]{I|L}V;[TP]DV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}V;[TP]DV{I|L}{[CP]|[EA]}GQ{I|L}V 4.5692;4.5329;4.3932;4.0146;3.9963;3.8753;3.7657;3.7326;3.6809;3.6446 -;-;-;-;-;-;-;-;-;- 5603 1 0.97 152851.7 1.0 11620 5703 17312 HBL1_DMSO_200M_050219_1,17325 HBL1_DMSO_200M_050219_1,17325,GQAEPESVLLV True True GQAEPESVLLV 83.140255 571.309985339642 54760626.0 17312.0 nc|ENSG00000127054|Q5TA45-4|INTS11;;ENSG00000127054|ENST00000435064|INTS11;;nc|ENSG00000127054|Q5TA45-2|INTS11;;nc|ENSG00000127054|Q5TA45-3|INTS11;;nc|ENSG00000127054|Q5TA45-5|INTS11;;ENST00000461514.6_1_1:1248044-1249114:-|nuORF;;ENST00000478641.5_1_1:1248044-1248711:-|nuORF;;ENST00000485710.5_1_1:1247522-1249186:-|nuORF;;ENST00000470030.6_1_1:1247241-1248711:-|nuORF 6.744315306345622 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17326 83.15 563.0 416450.0 25 0 58938.0 + + 18590 DALLIQKL 8 195 457.289408238501 912.564263543802 2 457.2894164919853 MULTI CID FTMS 0 0 0 17312 202449.21875 0.1349062362222643 4 -0.352203369140625 14 Unmodified _LADLIQKL_ ENSG00000183530|ENST00000327423|PRR14L 52.268347100219714 0.1285778651304833 3 {I|L}AD{I|L}{I|L}QK{I|L} 8 -1 + 84.238 0.0 0.0 9.2309 9.2309 88.333 0.0 0.0 0.0 19.51667520279372 9.344984512435689 9.344984512435689 3.450528104279016 0 1.0387254899964358 1.6989700043360187 0.0 0.5994850021680094 {I|L}AD{I|L}{I|L}QK{I|L};{I|L}A{I|L}D{I|L}QK{I|L};{I|L}AD{I|L}{I|L}[AG]K{I|L};{I|L}AD{I|L}{I|L}Q{I|L}K;{I|L}AD{I|L}Q{I|L}K{I|L};{I|L}A{I|L}D{I|L}[AG]K{I|L};{I|L}A{I|L}D{I|L}Q{I|L}K;{I|L}A{I|L}DQ{I|L}K{I|L};{I|L}AD{I|L}{I|L}[AG]{I|L}K;{I|L}AD{I|L}[AG]{I|L}K{I|L} 9.2309;8.8528;8.2159;8.2069;8.1321;7.8378;7.8288;7.754;7.1919;7.1172 +;-;-;-;-;-;-;-;-;- + 1407 + 1 0.97 178484.3 1.0 11621 5703 17312 HBL1_DMSO_200M_050219_1,17326 HBL1_DMSO_200M_050219_1,17326,LADLIQKL False False DALLIQKL 83.15012 457.289416491985 11451578.0 17312.0 ENSG00000183530|ENST00000327423|PRR14L 2.5219650268554688 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17327 83.16 479.0 1027500.0 25 0 217770.0 + + 20011 TVFTDHMLTV 10 204 581.2920547809874 1160.5695566287748 2 582.2939941287041 MULTI CID FTMS 0 0 0 17312 186803.828125 0.0099841575898031 -3 0.21484375 15 Unmodified _LIMCHLSFTP_ nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-5|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;ENSG00000060982|ENST00000261192|BCAT1 22.736283301280096 0.4578556481593033 3 {[TV]|[{I|L}S]}Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}TVTP 10 -1 + 69.886 0.0 0.0 6.0217 6.0217 81.976 0.0 0.0 0.0 2.090019402796841 12.628932919062365 2.090019402796841 3.706290716515923 0 0.4337955442476159 2.0 2.172592458143525 0.0 {[TV]|[{I|L}S]}Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}TVTP;{[TV]|[{I|L}S]}Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}S{I|L}TP;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}TVTP;{[TV]|[{I|L}S]}Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{M(Oxidation (M))|F}VTP;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}S{I|L}TP;{[QN]|[E{I|L}]|[KN]}EEM{I|L}TVTP;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}T{M(Oxidation (M))|F}VTP;{[TV]|[{I|L}S]}Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}TS{I|L}P;{[TV]|[{I|L}S]}YT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}VTP;{[QN]|[E{I|L}]|[KN]}EEM{I|L}S{I|L}TP 6.0217;5.7024;5.6337;5.4859;5.3144;5.2677;5.0979;5.0874;4.9936;4.9483 -;-;-;-;-;-;-;-;-;- 33564 1 0.97 364288.2 1.0 11622 5703 17312 HBL1_DMSO_200M_050219_1,17327 HBL1_DMSO_200M_050219_1,17327,LIMCHLSFTP False False TVFTDHMLTV 83.159768 582.293994128704 169406096.0 17312.0 nc|ENSG00000060982|P54687-2|BCAT1;;nc|ENSG00000060982|P54687-4|BCAT1;;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;;nc|ENSG00000060982|P54687-5|BCAT1;;nc|ENSG00000060982|P54687-3|BCAT1;;ENSG00000060982|ENST00000261192|BCAT1 5.723017613093059 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17328 83.17 598.0 326310.0 25 0 21100.0 + -1 DAPLSPMLY 9 134 1005.5033443957504 2008.9921358583008 2 1006.511645495892 MULTI CID FTMS 0 0 0 17312 187144.4375 0.824295754897963 -1 0.0763320922851562 16 nc|ENSG00000118689|O43524-2|FOXO3;ENSG00000118689|ENST00000406360|FOXO3;ENST00000395675.4_1_17:18575090-18575600:-|nuORF 3 [H{I|L}]{[QS]|[NT]}GS[{I|L}P]W 9 -1 28.49 0.0 0.0 1.4181 0.0 0.0 0.0 1000.4777064972258 1000.4777064972258 -2.2169504443080577 0.0 -2.2169504443080577 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 [H{I|L}]{[QS]|[NT]}GS[{I|L}P]W 1.4181 - 16969 1 0.97 129663.2 1.0 11623 5703 17312 HBL1_DMSO_200M_050219_1,17328 HBL1_DMSO_200M_050219_1,17328, False False DAPLSPMLY 83.170265 1006.51164549589 5828990.0 17312.0 nc|ENSG00000118689|O43524-2|FOXO3;;ENSG00000118689|ENST00000406360|FOXO3;;ENST00000395675.4_1_17:18575090-18575600:-|nuORF 7.643447081247966 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17329 83.174 214.0 793400.0 25 0 63044.0 21623 LPLADQIKI 9 147 505.8164468443707 1009.6183407555416 2 505.8167907595634 MULTI CID FTMS 0 0 0 17312 170124.375 1.0 0 0.0 17 Unmodified _LPLADQIKI_ ENSG00000058600|ENST00000299853|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;ENST00000569787.1_1_16:22328322-22336592:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E 36.506200033944 0.094635877243972 3 {I|L}P{I|L} 3 6 38.914 0.0 0.0 3.8544 0.0 0.0 0.0 683.3737379156562 683.3737379156562 9.66136277617614 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 + {I|L}P{I|L} 3.8544 + + 2434 + 1 0.97 130373.2 1.0 11624 5703 17312 HBL1_DMSO_200M_050219_1,17329 HBL1_DMSO_200M_050219_1,17329,LPLADQIKI True True QILEAIPQV 83.174307 505.816790759563 3648333.5 17312.0 ENST00000559287.5_1_14:24702733-24706289:+|nuORF;;ENSG00000100938|ENST00000399440|GMPR2;;ENST00000559606.1_1_14:24704927-24706289:+|nuORF;;nc|ENSG00000100938|Q9P2T1-2|GMPR2;;nc|ENSG00000100938|Q9P2T1-3|GMPR2 4.301021734873454 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17330 83.185 635.0 140860.0 25 0 11975.0 + 16661 KELLELYQDNL 11 166 689.3691894412041 0 689.3691894412041 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _KELLELYQDNL_ REV__ENSG00000125633|ENST00000376300|CCDC93 18.373094154950223 0.3729378939122973 3 {I|L}{I|L}E 3 -1 17.747 0.0 0.0 1.2891 0.0 0.0 893.4167103259643 125.072580205725 1018.4892905316892 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 {I|L}{I|L}E 1.2891 + + 182 + 1 0.97 67124.0 1.0 11625 5703 17312 HBL1_DMSO_200M_050219_1,17330 HBL1_DMSO_200M_050219_1,17330,KELLELYQDNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17331 83.197 615.0 228680.0 25 0 11411.0 -1 0 129 934.479671243551 0 934.4770385622978 PEAK CID FTMS 0 0 0 17312 130539.671875 0.3530095950386802 3 -0.3024444580078125 19 3 YAMEN{I|L} 6 -1 20.384 0.0 0.0 1.0918 0.0 0.0 933.5508052203536 209.0576113336547 1142.6084165540085 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5138793319624578 0.6139829889124311 YAMEN{I|L} 1.0918 - 1165 + 1 0.97 93193.4 1.0 11626 5703 17312 HBL1_DMSO_200M_050219_1,17331 HBL1_DMSO_200M_050219_1,17331, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17332 83.211 800.0 248790.0 25 0 23755.0 + 44187 YLFERIKEL 9 202 404.2319132151661 1209.6739102456984 3 404.2323486208916 MULTI CID FTMS 0 0 0 17312 137673.34375 0.9599087927513552 2 -0.1786041259765625 20 Unmodified _YLFERIKEL_ ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-2|TMEM209 21.59015148037692 0.2564810811560323 3 Y{I|L}{M(Oxidation (M))|F}{I|L}K{I|L}WD{I|L} 9 4 + 80.065 0.0 0.0 6.6187 6.6187 82.0 0.0 0.0 0.0 33.09206913345962 13.46787486224656 13.46787486224656 2.702789364562065 0 0.25 2.0 1.1382104921644451 0.3054621874040891 Y{I|L}{M(Oxidation (M))|F}{I|L}K{I|L}WD{I|L};Y{I|L}{I|L}{M(Oxidation (M))|F}K{I|L}WD{I|L};Y{I|L}{M(Oxidation (M))|F}{I|L}K{[ET]|[MV]}[PS]{I|L};Y{I|L}{I|L}{M(Oxidation (M))|F}K{[ET]|[MV]}[PS]{I|L};Y{I|L}{M(Oxidation (M))|F}{I|L}[R{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};Y{I|L}{I|L}{M(Oxidation (M))|F}[R{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};Y{I|L}{M(Oxidation (M))|F}{I|L}K{I|L}WVE;Y{I|L}{M(Oxidation (M))|F}{I|L}KQQ{[SA]|[TG]}{I|L};Y{I|L}{I|L}{M(Oxidation (M))|F}K{I|L}WVE;Y{I|L}{I|L}{M(Oxidation (M))|F}KQQ{[SA]|[TG]}{I|L} 6.6187;6.3953;6.0605;5.837;5.7693;5.5459;5.4511;5.3619;5.2277;5.1384 -;-;-;-;-;-;-;-;-;- 414 + 1 0.97 156429.2 0.959999978542328 11627 5703 17312 HBL1_DMSO_200M_050219_1,17332 HBL1_DMSO_200M_050219_1,17332,YLFERIKEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17334 83.215 6.4 8010900.0 25 0 1137600.0 + 4613 DAYTVLTRI 9 70 526.2927680362789 1050.5709831393576 2 526.2929565310478 MULTI CID FTMS 0 0 0 17333 6751020.5 0.1595443256794828 4 -0.2942276000976562 1 Unmodified _DAYTVLTRI_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 40.23920728925047 0.0741434193262949 3 {[DA]|[EG]}YTV{I|L}T[R{I|L}] 9 0 + 68.963 0.0 0.0 6.5643 6.5643 82.491 0.0 0.0 0.0 50.77037404299105 4.137342758552691 4.137342758552691 3.0102999566398125 0 1.2302046884880935 1.6989700043360187 0.3807196863200844 0.0 + + {[DA]|[EG]}YTV{I|L}T[R{I|L}];{[DA]|[EG]}YT{I|L}VT[R{I|L}];{[DA]|[EG]}Y{I|L}S{I|L}T[R{I|L}];{[DA]|[EG]}Y{I|L}TVT[R{I|L}] 6.5643;6.2778;5.9154;5.6288 +;-;-;- + 129 + 1 0.97 42235.8 1.0 11628 5704 17333 HBL1_DMSO_200M_050219_1,17334 HBL1_DMSO_200M_050219_1,17334,DAYTVLTRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17335 83.216 8.0 7169400.0 25 0 1065800.0 + 12721 GVLTLIGSSI 10 84 480.2923743951735 958.570195857147 2 480.2924987673759 MULTI CID FTMS 0 0 0 17333 8064584.5 0.9952127983185282 -1 0.1263275146484375 2 Unmodified _GVLTLIGSSI_ REV__ENSG00000100342|ENST00000397278|APOL1;REV__nc|ENSG00000100342|O14791-2|APOL1;REV__nc|ENSG00000100342|O14791-3|APOL1 54.773552608820026 0.052133998764723 3 [VG]{I|L}T{I|L}{I|L}[VG]TS 10 -1 + 70.621 0.0 0.0 7.3674 7.3674 86.859 0.0 0.0 0.0 16.43430519734885 44.80249918074449 16.43430519734885 4.515449934959719 0 1.774227503252014 2.0 1.0994850021680094 0.0 [VG]{I|L}T{I|L}{I|L}[VG]TS;[VG]T{I|L}{I|L}{I|L}[VG]TS;[VG]{I|L}T{I|L}[VG]{I|L}TS;[VG]T{I|L}{I|L}[VG]{I|L}TS;{[QN]|[E{I|L}]|[KN]}K{I|L}{I|L}[VG]TS;[VG]{I|L}E[K{I|L}]{I|L}TS;{[QN]|[E{I|L}]|[KN]}K{I|L}[VG]{I|L}TS;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L}[VG]TS;{I|L}{I|L}[SG]{I|L}{I|L}[VG]TS;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}[VG]{I|L}TS 7.3674;6.8963;6.8443;6.3733;5.4113;5.3791;4.8882;3.9209;3.4259;3.3978 -;-;-;-;-;-;-;-;-;- 581 1 0.97 50692.0 1.0 11629 5704 17333 HBL1_DMSO_200M_050219_1,17335 HBL1_DMSO_200M_050219_1,17335,GVLTLIGSSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17336 83.218 4.0 15367000.0 25 0 3120200.0 + 4641 DAYVLPKLY 9 59 541.2999781941046 1080.585403455009 2 541.3004028201103 MULTI CID FTMS 0 0 0 17333 13002752.0 0.0459326733917838 -5 0.4376068115234375 3 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 37.97399986684836 0.0865783450051559 3 {[DA]|[EG]}YV{I|L}PK{I|L}Y 9 0 {[DA]|[EG]}Y + + 36.943 21.427 6.1372 3.4188 3.4188 51.084 0.0 0.0 0.0 0.0 7.602583710382476 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L}Y 3.4188 + + 74 + 1 0.97 52047.7 1.0 11630 5704 17333 HBL1_DMSO_200M_050219_1,17336 HBL1_DMSO_200M_050219_1,17336,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17337 83.219 7.1 9213500.0 25 0 1500400.0 + 9901 FPFYGKPMRI 10 65 419.2266611861339 1254.6581541586015 3 419.2268249392509 MULTI CID FTMS 0 0 0 17333 6721633.5 0.5521977304273761 12 -0.63873291015625 4 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 27.628801355627647 0.3479284626772844 3 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 67.612 0.0 0.0 5.3889 0.0 0.0 119.07408339668125 0.0 119.07408339668125 0.0 45.39381281052492 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.3889 - 185 1 0.97 55624.8 1.0 11631 5704 17333 HBL1_DMSO_200M_050219_1,17337 HBL1_DMSO_200M_050219_1,17337,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17338 83.22 8.8 7637400.0 25 0 960420.0 + 44687 YPFKPPMI 8 75 496.7673432328521 991.5201335325042 2 496.7675048708916 MULTI CID FTMS 0 0 0 17333 5905595.0 0.4740579559139213 -4 0.3411712646484375 5 Unmodified _YPFKPPMI_ ENSG00000156587|ENST00000287156|UBE2L6 49.66892048692302 0.1408045912742846 3 YP{M(Oxidation (M))|F}KPPM{I|L} 8 0 + 70.347 0.0 0.0 7.0949 7.0949 94.575 0.0 0.0 0.0 33.51464731531564 14.024174299985006 14.024174299985006 30.275559905872456 0 0.805462187404089 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPKN{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};YP{M(Oxidation (M))|F}[{I|L}A][WP]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPKGG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPYV{[QN]|[E{I|L}]|[KN]};[YV]PPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPYPM{I|L};[YV]PPKN{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KP[QT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 7.0949;4.0415;4.0184;3.3139;3.1073;2.5184;2.384;2.384;1.5188;1.4526 +;-;-;-;-;-;-;-;-;- + 157 + 1 0.97 56652.8 1.0 11632 5704 17333 HBL1_DMSO_200M_050219_1,17338 HBL1_DMSO_200M_050219_1,17338,YPFKPPMI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17339 83.221 9.7 6577400.0 25 0 841990.0 + 9846 FPFGKIGTV 9 75 483.2764472907161 964.5383416482322 2 483.2765685915947 MULTI CID FTMS 0 0 0 17333 5686024.0 0.3769056573857189 -10 0.7884674072265625 6 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 34.40172386719151 0.1061884637610825 3 [KG]{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}PE 8 7 + 52.384 0.0 0.0 5.4309 5.4309 84.857 0.0 0.0 0.0 3.290587192642249 39.619303010596205 3.290587192642249 9.013553111951891 0 0.4247425010840047 0.0 0.0 0.0 [KG]{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}PE;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}K{[QV]|[N{I|L}]|[RA]|[KV]}TV;{M(Oxidation (M))|F}[{I|L}T]TG{I|L}[WK];[YV]VTG{I|L}[WK];[YV]EK{I|L}[WK];{M(Oxidation (M))|F}[{I|L}T]TG{[QV]|[N{I|L}]|[RA]|[KV]}TV;[YV]EK{[QV]|[N{I|L}]|[RA]|[KV]}TV;[YV]VTG{[QV]|[N{I|L}]|[RA]|[KV]}TV 5.4309;4.4964;3.0466;2.5519;2.5116;1.7926;1.5348;1.2979 -;-;-;-;-;-;-;- 193 1 0.97 52478.9 1.0 11633 5704 17333 HBL1_DMSO_200M_050219_1,17339 HBL1_DMSO_200M_050219_1,17339,FPFGKIGTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17340 83.222 9.4 5520900.0 25 0 656520.0 + 26066 NMVDIIHSV 9 79 514.2658017405686 1026.517050547937 2 514.2661010622978 MULTI CID FTMS 0 0 0 17333 5100388.0 1.0 0 0.0 7 Unmodified _NMVDIIHSV_ ENSG00000114054|ENST00000251654|PCCB;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;nc|ENSG00000114054|P05166-2|PCCB 81.61307344734483 0.0171259190214613 3 [MN]VD{I|L}{I|L}H[VS] 9 0 + 69.944 0.0 0.0 6.8137 6.8137 94.305 0.0 0.0 0.0 39.990823894397565 14.44968960007344 14.44968960007344 43.28340932684426 0 0.805462187404089 1.6989700043360187 2.079689690656103 0.0 + + [MN]VD{I|L}{I|L}H[VS];[H{I|L}]{I|L}DVSV[MN];[HS]V{I|L}{I|L}DV[MN];[HS]V{I|L}EVV[MN];[H{I|L}]{I|L}DSVV[MN];[H{I|L}]{I|L}SVDV[MN];[HS]V{I|L}[{M(Oxidation (M))|F}V]YY;[H{I|L}]{I|L}SDVV[MN];[H{I|L}][VS]{I|L}DV[MN];[HS]{I|L}{I|L}VDV[MN] 6.8137;2.5972;2.3485;2.0553;2.0107;1.623;1.4776;1.3298;0.98668;0.89227 +;-;-;-;-;-;-;-;-;- + 236 + 1 0.97 45282.9 1.0 11634 5704 17333 HBL1_DMSO_200M_050219_1,17340 HBL1_DMSO_200M_050219_1,17340,NMVDIIHSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17341 83.224 9.7 5253900.0 25 0 638250.0 + 24294 MAYPDLNEI 9 85 533.250190119819 1064.4858273064378 2 533.2502929568291 MULTI CID FTMS 0 0 0 17333 4956185.5 0.2031980228375205 -4 0.3411712646484375 8 Unmodified _MAYPDLNEI_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 24.67388899826682 0.2172451872415813 3 {[DS]|[MA]|[CV]|TT}YPD{I|L}YP 8 3 42.829 0.0 0.0 4.0234 0.0 0.0 0.0 111.01630575621144 111.01630575621144 10.332144135156298 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[DS]|[MA]|[CV]|TT}YPD{I|L}YP 4.0234 - 561 1 0.97 47366.9 1.0 11635 5704 17333 HBL1_DMSO_200M_050219_1,17341 HBL1_DMSO_200M_050219_1,17341,MAYPDLNEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17342 83.225 22.0 3875000.0 25 0 490880.0 + 18588 LADLDLHQ 8 94 462.7438414389623 923.4731299447244 2 462.7439147830009 MULTI CID FTMS 0 0 0 17333 2900591.0 0.609850099952988 18 -1.038482666015625 9 Unmodified _LADLDLHQ_ REV__CIITA|p.L1020Sfs*30|1|0.33|ENSG00000179583|chr16:10916453-10916453|C/-|frameshift_variant;REV__ENSG00000179583|ENST00000324288|CIITA;REV__nc|ENSG00000179583|P33076-3|CIITA;REV__nc|ENSG00000179583|P33076|CIITA 12.531546534597751 0.7257836412119636 3 [{I|L}A][NG]A{I|L}T 7 -1 39.09 0.0 0.0 4.2329 0.0 0.0 0.0 280.1095064752563 280.1095064752563 27.495980819947462 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7887254899964358 0.0 [{I|L}A][NG]A{I|L}T 4.2329 - 318 + 1 0.97 66798.8 1.0 11636 5704 17333 HBL1_DMSO_200M_050219_1,17342 HBL1_DMSO_200M_050219_1,17342,LADLDLHQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17343 83.226 22.0 1797300.0 25 0 119300.0 + 31975 RVFIGNLNTL 10 68 573.8352425486172 1145.6559321640343 2 573.8353149294853 MULTI CID FTMS 0 0 0 17333 2328904.25 1.0 0 0.0 10 Unmodified _RVFIGNLNTL_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 47.74868867922204 0.0933642699623533 3 [RV]{M(Oxidation (M))|F}{I|L}GN{I|L}NT{I|L} 10 0 + 63.109 0.0 0.0 5.5085 5.5085 85.569 0.0 0.0 0.0 18.00984766077626 38.08139293425265 18.00984766077626 9.164539485499256 0 0.7429928190999391 1.154901959985743 0.0 0.3494850021680094 + + [RV]{M(Oxidation (M))|F}{I|L}GN{I|L}NT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GGG{I|L}NT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GN{I|L}GGT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GGG{I|L}GGT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GN[KA]E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KA]NG{I|L}{[VA]|[{I|L}G]}T{I|L};[RV]{M(Oxidation (M))|F}{I|L}G[KA]NE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[KA]G{I|L}{[VA]|[{I|L}G]}T{I|L};[RV]{M(Oxidation (M))|F}{I|L}GGG[KA]E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[KQ]{I|L}{[VA]|[{I|L}G]}T{I|L} 5.5085;4.7086;4.7086;3.9118;3.6748;3.6187;3.412;3.356;2.8748;2.782 +;-;-;-;-;-;-;-;-;- + 269 1 0.97 38090.2 1.0 11637 5704 17333 HBL1_DMSO_200M_050219_1,17343 HBL1_DMSO_200M_050219_1,17343,RVFIGNLNTL True True RVFIGNLNTL 83.225888 573.835314929485 45080160.0 17333.0 nc|ENSG00000092199|P07910-3|HNRNPC;;nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;ENSG00000179172|ENST00000317869|HNRNPCL1;;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;;ENSG00000277058|ENST00000617807|HNRNPCL3;;ENSG00000275774|ENST00000621994|HNRNPCL2;;nc|ENSG00000092199|P07910|HNRNPC;;ENSG00000179412|ENST00000323770|HNRNPCL4 8.36881160736084 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17344 83.227 25.0 2257800.0 25 0 330740.0 -1 LASTECFL 8 63 470.7263124699047 939.4380720066094 2 470.7264892458916 MULTI CID FTMS 0 0 0 17333 2235172.25 0.4590847828306075 -18 1.4501571655273438 11 Carbamidomethyl (C) _LASTEC(Carbamidomethyl (C))FL_ ENSG00000196248|ENST00000641123|OR10S1;nc|ENSG00000196248|Q8NGN2|OR10S1 19.438996006549623 0.6237395211498085 3 {I|L}A{I|L} 3 -1 45.93 0.0 0.0 4.8891 0.0 0.0 0.0 639.2093325035577 639.2093325035577 15.172655519383085 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.0 {I|L}A{I|L} 4.8891 - 66 + 1 0.97 49536.2 1.0 11638 5704 17333 HBL1_DMSO_200M_050219_1,17344 HBL1_DMSO_200M_050219_1,17344,LASTECFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17345 83.228 38.0 1688600.0 25 0 103190.0 + 45670 YVTEELPQL 9 85 546.2834702973372 1090.5523876614743 2 546.2836791872978 MULTI CID FTMS 0 0 0 17333 1960909.5 0.6398261197983688 3 -0.2258758544921875 12 Unmodified _YVTEELPQL_ ENSG00000139684|ENST00000378720|ESD 77.98433622928108 0.0180125044636492 3 [{M(Oxidation (M))|F}V]K[C(Carbamidomethyl (C))S]{I|L}PQ{I|L} 9 4 + 35.524 0.0 0.0 3.2574 3.2574 68.75 0.0 0.0 0.0 0.8069683534261216 0.8069683534261216 0.8069683534261216 0.8069683534261216 0 0.8807196863200843 0.0 0.0 0.805462187404089 [{M(Oxidation (M))|F}V]K[C(Carbamidomethyl (C))S]{I|L}PQ{I|L};{[ET]|[MV]}E{I|L}M{I|L}KMP;[{M(Oxidation (M))|F}V]K{I|L}[C(Carbamidomethyl (C))S]PQ{I|L};[{I|L}P]{[{M(Oxidation (M))|F}D]|MM}M{I|L}KMP;[QP][QT]YVKMP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{NN|[MP]|[D{I|L}]|[EV]}M{I|L}KMP;{[QN]|[E{I|L}]|[KN]}TEM{I|L}KMP;{[QN]|[E{I|L}]|[KN]}PDYVKMP;[QP]{I|L}[PS][QP]PMP;[{M(Oxidation (M))|F}V]K[C(Carbamidomethyl (C))S]{I|L}P[AG]{I|L} 3.2574;3.1834;3.1638;2.4132;2.3232;2.3136;2.1945;2.174;1.7549;1.6745 -;-;-;-;-;-;-;-;-;- 479 + 1 0.97 59864.5 1.0 11639 5704 17333 HBL1_DMSO_200M_050219_1,17345 HBL1_DMSO_200M_050219_1,17345,YVTEELPQL True True YVTEELPQL 83.228244 546.283679187298 34896476.0 17333.0 ENSG00000139684|ENST00000378720|ESD 5.118917147318522 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17346 83.233 248.0 741950.0 25 0 35599.0 -1 0 152 881.907832465658 1761.801111998116 2 881.9098388552666 MULTI CID FTMS 0 0 0 17333 810061.6875 0.2105824813786799 4 -0.2942276000976562 13 3 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 132.2 0.0 0.0 7.5037 7.5037 63.434 0.0 0.0 0.0 8.354706403678875 10.841671119825662 8.354706403678875 0.0 0 1.548455006504028 1.3979400086720375 1.7440840204505517 2.527512185679502 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGADQA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGADQA{M(Oxidation (M))|F}YKV{I|L};[YQ]V[CS]AGAQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]AGAQDA{M(Oxidation (M))|F}YKV{I|L};[QA]HDEAGAQDA{M(Oxidation (M))|F}YKV{I|L};[QA]HDEAGAQDA{M(Oxidation (M))|F}YQV{I|L} 7.5037;7.5037;7.2518;7.2518;7.069;7.069;7.0295;7.0295;7.0263;7.0263 -;-;-;-;-;-;-;-;-;- 106190 1 0.97 126966.1 1.0 11640 5704 17333 HBL1_DMSO_200M_050219_1,17346 HBL1_DMSO_200M_050219_1,17346, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17347 83.235 68.0 727020.0 25 0 83948.0 + 35085 SQVEIKLSL 9 83 508.8030252633365 1015.591497593473 2 508.8031188845634 MULTI CID FTMS 0 0 0 17333 731785.1875 0.7521287180579875 1 -0.052276611328125 14 Unmodified _SQVEIKLSL_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 41.95555342248728 0.0647214845423414 3 {[QS]|[NT]}VE{I|L}[K{I|L}]S{I|L} 9 0 + 54.05 0.0 0.0 5.322 5.322 83.475 0.0 0.0 0.0 15.38673012463569 7.403626894942434 7.403626894942434 7.403626894942434 0 0.9247425010840048 0.8239087409443188 1.024227503252014 0.0 + + {[QS]|[NT]}VE{I|L}[K{I|L}]S{I|L};{[QS]|[NT]}VE{I|L}[K{I|L}]TV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}T[WK];{NN|[MP]|[D{I|L}]|[EV]}{I|L}KT{I|L}[WK] 5.322;4.593;3.4127;2.4236 +;-;-;- + 435 + 1 0.97 41584.4 1.0 11641 5704 17333 HBL1_DMSO_200M_050219_1,17347 HBL1_DMSO_200M_050219_1,17347,SQVEIKLSL True True SQVEIKLSL 83.234517 508.803118884563 21913602.0 17333.0 ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;nc|ENSG00000177731|Q13045-2|FLII;;nc|ENSG00000177731|Q13045-3|FLII 4.897279262542725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17348 83.24 326.0 701510.0 25 0 73625.0 + 18859 LASQHEEL 8 206 309.4904109860205 925.4494035582616 3 309.4901611208916 MULTI CID FTMS 0 0 0 17333 709234.75 0.5633006594055512 18 -1.038482666015625 15 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 3 {I|L}{M(Oxidation (M))|F} 2 -1 19.464 0.0 0.0 2.1032 0.0 0.0 647.3021184436625 0.0 647.3021184436625 0.0 5.263007164371388 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 2.1032 - 337 1 0.97 185981.8 1.0 11642 5704 17333 HBL1_DMSO_200M_050219_1,17348 HBL1_DMSO_200M_050219_1,17348,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17349 83.242 42.0 984660.0 25 0 141960.0 + 35619 SVADYFKQI 9 70 535.7788994352109 1069.5432459372216 2 535.7802001833916 MULTI CID FTMS 0 0 0 17333 676692.625 0.1299092660180859 4 -0.2942276000976562 16 Unmodified _SVADYFKQI_ ENSG00000089280|ENST00000254108|FUS;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 25.399314129420983 0.2080152500878129 3 [VS][WY]{M(Oxidation (M))|F}KQ{I|L} 8 2 + 39.104 0.0 0.0 3.6561 3.6561 81.989 0.0 0.0 0.0 26.005018913849653 14.706225184280797 14.706225184280797 12.514712847550763 0 0.4247425010840047 2.0 0.0 0.3252574989159953 [VS][WY]{M(Oxidation (M))|F}KQ{I|L};[VS][WY]{M(Oxidation (M))|F}K[AG]{I|L};[VS][WY]{M(Oxidation (M))|F}KAAV;W[KQ][HC]KQ{I|L} 3.6561;2.486;2.114;1.7862 -;-;-;- 111 + 1 0.97 39652.0 1.0 11643 5704 17333 HBL1_DMSO_200M_050219_1,17349 HBL1_DMSO_200M_050219_1,17349,SVADYFKQI False True SVADYFKQI 83.241629 535.780200183392 37678132.0 17333.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 2.460132439931234 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17350 83.244 139.0 1227200.0 25 0 146920.0 + 19869 LHMDSDDEI 9 167 537.7245836015071 1073.434614269814 2 537.7252075076103 MULTI CID FTMS 0 0 0 17333 529772.5 0.2234045256102537 -2 0.2026596069335937 17 Unmodified _LHMDSDDEI_ ENSG00000104218|ENST00000678616|CSPP1;ENST00000521168.5_1_8:68070723-68107652:+|nuORF;nc|ENSG00000104218|Q1MSJ5-1|CSPP1;nc|ENSG00000104218|Q1MSJ5-2|CSPP1;nc|ENSG00000104218|Q1MSJ5|CSPP1 24.67388899826682 0.2172451872415813 3 [H{I|L}]MD{I|L}C{I|L} 7 4 42.769 0.0 0.0 3.9843 0.0 0.0 0.0 245.0213811978016 245.0213811978016 22.12939136549785 0.0 0.0 0.0 0 0.2614393726401688 1.5228787452803376 0.2742275032520141 0.0 [H{I|L}]MD{I|L}C{I|L} 3.9843 - 1671 1 0.97 132016.5 1.0 11644 5704 17333 HBL1_DMSO_200M_050219_1,17350 HBL1_DMSO_200M_050219_1,17350,LHMDSDDEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17351 83.251 365.0 445860.0 25 0 46833.0 1269 AINEEFVSI 9 171 511.2643144051571 1020.5140758771142 2 511.2647888064384 MULTI CID FTMS 0 0 0 17333 456751.5625 0.3914513173995123 3 -0.2258758544921875 18 Unmodified _AINEEFVSI_ ENSG00000133103|ENST00000455146|COG6;nc|ENSG00000133103|Q9Y2V7-2|COG6 43.85829265575387 0.0542763391141878 3 {I|L}AS{I|L}RVS{I|L} 8 5 33.339 0.0 0.0 3.2669 0.0 0.0 162.98119121090173 0.0 162.98119121090173 0.0 0.3482215278698319 0.0 0.0 0 0.2742275032520141 0.0 0.3252574989159953 0.0 {I|L}AS{I|L}RVS{I|L} 3.2669 - 1045 + 1 0.97 125082.0 1.0 11645 5704 17333 HBL1_DMSO_200M_050219_1,17351 HBL1_DMSO_200M_050219_1,17351,AINEEFVSI True True YLASLIRSV 83.251027 511.264788806438 813351.4375 17333.0 ENSG00000103035|ENST00000219313|PSMD7 4.240736087163289 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17352 83.257 331.0 231870.0 25 0 26964.0 -1 NILLQLECRRI 11 123 714.4137723800449 1426.8129918268896 2 714.4154540896416 MULTI CID FTMS 0 0 0 17333 410161.5 1.0 0 0.0 19 Carbamidomethyl (C) _NILLQLEC(Carbamidomethyl (C))RRI_ Charlie1a_dup2166|chr6:32809138-32810403:-|1.6386048925504697|0.3921643114078051|2.06|48.0|31|2|sense 5.296884461304476 0.8501568894076437 3 {[QV]|[N{I|L}]|[RA]|[KV]}VK 4 -1 18.249 0.0 0.0 1.279 0.0 0.0 0.0 969.4906706201116 969.4906706201116 7.764706236572469 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}VK 1.279 - 490 1 0.97 61471.3 1.0 11646 5704 17333 HBL1_DMSO_200M_050219_1,17352 HBL1_DMSO_200M_050219_1,17352,NILLQLECRRI False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 17353 83.263 353.0 545890.0 25 0 48141.0 + 12712 GVLSSDGVWRV 11 170 587.814718111146 0 587.8148071169853 PEAK CID FTMS 0 0 0 17333 402749.15625 0.0399800864752965 8 -0.4763107299804687 20 Unmodified _GVLSSDGVWRV_ ENSG00000125459|ENST00000245564|MSTO1;ENST00000483734.5_1_1:155580745-155584061:+|nuORF;nc|ENSG00000125459|Q9BUK6-2|MSTO1;nc|ENSG00000125459|Q9BUK6-3|MSTO1 80.6760300276096 9.135227195593556e-06 3 {I|L}SSDVGKMD 9 7 65.005 0.0 0.0 5.5389 0.0 0.0 156.08931893442474 82.06698785953358 238.15630679395832 0.0 0.0 0.0 0.0 0 1.174742501084005 0.0 1.0044321917401078 0.909097005026964 {I|L}SSDVGKMD 5.5389 - 3814 + 1 0.97 142660.9 1.0 11647 5704 17333 HBL1_DMSO_200M_050219_1,17353 HBL1_DMSO_200M_050219_1,17353,GVLSSDGVWRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17355 83.268 106.0 824120.0 25 0 148630.0 -1 ALLETYCA 8 86 314.15333966184846 939.4381895857456 3 314.1531249880791 MULTI CID FTMS 0 0 0 17354 428176.28125 0.2396702595174605 1 -0.12384033203125 1 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 20.453626601364224 0.6087503291685402 3 A{I|L}{I|L} 3 -1 49.253 0.0 0.0 5.2428 0.0 0.0 0.0 639.2108625472881 639.2108625472881 38.79493455131808 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 A{I|L}{I|L} 5.2428 + + 53 + 1 0.97 73857.4 1.0 11648 5705 17354 HBL1_DMSO_200M_050219_1,17355 HBL1_DMSO_200M_050219_1,17355,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17356 83.272 225.0 908200.0 25 0 90483.0 + -1 LPRYICCMTF 10 143 660.3032373433291 1318.591921753458 2 660.3041259646416 MULTI CID FTMS 0 0 0 17354 841967.5 0.86975345940812 1 -0.12384033203125 2 Carbamidomethyl (C),Oxidation (M) _LPRYIC(Carbamidomethyl (C))CM(Oxidation (M))TF_ REV__ENSG00000165125|ENST00000359396|TRPV6;REV__nc|ENSG00000165125|Q9H1D0-2|TRPV6 13.90604991867851 0.6142120002215601 3 [{I|L}T][PA]{I|L}{M(Oxidation (M))|F}C(Carbamidomethyl (C))Y 8 -1 40.241 0.0 0.0 3.0518 0.0 0.0 0.0 350.08278257079 350.08278257079 16.063224227068414 0.0 0.0 0.0 0 0.7614393726401688 1.3010299956639813 1.2783773187068794 0.0 [{I|L}T][PA]{I|L}{M(Oxidation (M))|F}C(Carbamidomethyl (C))Y 3.0518 - 3518 1 0.97 148959.9 1.0 11649 5705 17354 HBL1_DMSO_200M_050219_1,17356 HBL1_DMSO_200M_050219_1,17356,LPRYICCMTF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17357 83.275 163.0 756950.0 25 0 89142.0 + 25924 NLLPKLHIV 9 122 349.5625036851471 1045.6656816556413 3 349.5622436404228 MULTI CID FTMS 0 0 0 17354 664753.25 0.8730759342507098 1 -0.12384033203125 3 Unmodified _NLLPKLHIV_ ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1 30.22481116460888 0.1466181017706357 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V 9 0 + 48.101 0.0 0.0 4.6001 4.6001 87.142 0.0 0.0 0.0 28.087058085473707 11.42667503568731 11.42667503568731 48.10148252194999 0 0.0 1.6989700043360187 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V 4.6001 + + 200 + 1 0.97 110136.6 1.0 11650 5705 17354 HBL1_DMSO_200M_050219_1,17357 HBL1_DMSO_200M_050219_1,17357,NLLPKLHIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17358 83.278 136.0 1086600.0 25 0 108970.0 + 10779 FYPPPRITL 9 106 552.3158791596387 1102.617205386077 2 552.3162109255791 MULTI CID FTMS 0 0 0 17354 473910.4375 0.3187936006570811 -18 1.4622421264648438 4 Unmodified _FYPPPRITL_ ENSG00000102221|ENST00000614628|JADE3 25.399314129420983 0.2080152500878129 3 PP[YE] 4 7 20.445 0.0 0.0 1.8543 0.0 0.0 598.3822163137371 0.0 598.3822163137371 0.0 2.996812376923046 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PP[YE] 1.8543 - 139 1 0.97 122776.8 1.0 11651 5705 17354 HBL1_DMSO_200M_050219_1,17358 HBL1_DMSO_200M_050219_1,17358,FYPPPRITL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17359 83.284 342.0 385240.0 25 0 65836.0 -1 0 116 739.3627475096896 2215.0664131292688 3 739.3675414919853 MULTI CID FTMS 0 0 0 17354 391883.9375 0.7307580468669784 -6 0.4898834228515625 5 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F} 3 -1 27.76 0.0 0.0 1.2532 0.0 0.0 0.0 1864.8586243931936 1864.8586243931936 1.008374437099473 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F} 1.2532 - 1933 1 0.97 101063.4 1.0 11652 5705 17354 HBL1_DMSO_200M_050219_1,17359 HBL1_DMSO_200M_050219_1,17359, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17360 83.286 110.0 796480.0 25 0 55700.0 + 29298 QIIRELQVL 9 114 556.3453298044454 1110.6761066756908 2 556.3461791872978 MULTI CID FTMS 0 0 0 17354 397945.40625 0.5764789056552662 -1 0.052276611328125 6 Unmodified _QIIRELQVL_ ENSG00000126934|ENST00000262948|MAP2K2;ENSG00000169032|ENST00000307102|MAP2K1;ENST00000425818.2_1_15:66679685-66737158:+|nuORF;ENST00000519737.1_1_8:29885475-29885718:+|nuORF;ENST00000599345.1_1_19:4101110-4123872:-|nuORF;nc|ENSG00000169032|Q02750-2|MAP2K1 81.89019881105858 0.0170587746866453 3 [Q{I|L}]{[RE]|[WV]}{I|L}{I|L}QV{I|L} 9 2 + 74.592 0.0 0.0 6.7159 6.7159 90.022 0.0 0.0 0.0 9.863332872223054 16.478174818886373 9.863332872223054 9.208187539523747 0 1.2302046884880935 1.6989700043360187 0.8807196863200843 1.803312144463609 [Q{I|L}]{[RE]|[WV]}{I|L}{I|L}QV{I|L};[Q{I|L}]{[RE]|[WV]}{I|L}{I|L}[AG]V{I|L};[AG]{I|L}{[RE]|[WV]}{I|L}{I|L}QV{I|L};[AG]{I|L}{[RE]|[WV]}{I|L}{I|L}[AG]V{I|L};{[RE]|[WV]}[Q{I|L}]{I|L}{I|L}QV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[W{I|L}]{I|L}{I|L}QV{I|L};{[RE]|[WV]}[Q{I|L}]{I|L}{I|L}[AG]V{I|L};[AG]V[W{I|L}]{I|L}{I|L}QV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[W{I|L}]{I|L}{I|L}[AG]V{I|L};[AG]V[W{I|L}]{I|L}{I|L}[AG]V{I|L} 6.7159;5.8869;5.8279;5.0027;4.7856;4.4174;3.9566;3.6578;3.5883;2.2149 -;-;-;-;-;-;-;-;-;- 265 1 0.97 73885.8 1.0 11653 5705 17354 HBL1_DMSO_200M_050219_1,17360 HBL1_DMSO_200M_050219_1,17360,QIIRELQVL True True QIIRELQVL 83.286298 556.346179187298 4804574.0 17354.0 ENSG00000126934|ENST00000262948|MAP2K2;;nc|ENSG00000169032|Q02750-2|MAP2K1;;ENST00000425818.2_1_15:66679685-66737158:+|nuORF;;ENST00000599345.1_1_19:4101110-4123872:-|nuORF;;ENSG00000169032|ENST00000307102|MAP2K1;;ENST00000519737.1_1_8:29885475-29885718:+|nuORF 3.784207979838053 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17361 83.293 398.0 660190.0 25 0 80534.0 2850 AVASEIMAVL 10 214 502.2781686518057 0 502.2787048220634 PEAK CID FTMS 0 0 0 17354 380659.75 1.0 0 0.0 7 Unmodified _AVASEIMAVL_ ENSG00000120254|ENST00000367321|MTHFD1L 42.09456458481378 0.0925120759127276 3 G{I|L}ME 4 8 37.652 0.0 0.0 3.7556 0.0 0.0 131.09514237998013 438.2380159967407 569.3331583767208 0.0 0.0 0.0 0.0 0 1.575257498915995 0.0 0.7742275032520141 0.0 G{I|L}ME 3.7556 - 1426 + 1 0.97 197409.5 1.0 11654 5705 17354 HBL1_DMSO_200M_050219_1,17361 HBL1_DMSO_200M_050219_1,17361,AVASEIMAVL True True KLAEEMLGL 83.293417 502.278704822063 2596634.25 17354.0 ENST00000600970.5_1_19:17327144-17330619:+|nuORF;;ENSG00000053501|ENST00000263897|USE1 3.4530184268951416 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17362 83.301 405.0 843720.0 25 0 65653.0 + 23756 LVADKLEPL 9 226 499.3012116219063 996.5878703106126 2 499.3009216189384 MULTI CID FTMS 0 0 0 17354 406574.375 0.6369435669795384 -3 0.2549362182617187 8 Unmodified _LVADKLEPL_ REV__ENSG00000148481|ENST00000277632|MINDY3 30.7034409873982 0.1405282614900322 3 {I|L}P{M(Oxidation (M))|F}{I|L}G{I|L}QP{I|L} 9 -1 + 65.874 0.0 0.0 6.61 6.61 84.581 0.0 0.0 0.0 39.71742048823616 0.4975853488934945 0.4975853488934945 4.376656615335136 0 0.7742275032520141 1.5228787452803376 0.0 0.3252574989159953 {I|L}P{M(Oxidation (M))|F}{I|L}G{I|L}QP{I|L};{I|L}G{I|L}{M(Oxidation (M))|F}P{I|L}QP{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}VAQP{I|L};{I|L}G{I|L}{M(Oxidation (M))|F}{I|L}PQP{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}VVNPV;{I|L}G[KT]AG{I|L}QP{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}G{I|L}[AG]P{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}VKSPP;{I|L}P{M(Oxidation (M))|F}{I|L}KVSPP;{I|L}P{M(Oxidation (M))|F}{I|L}G{I|L}[PA]G{I|L} 6.61;6.1708;6.0058;5.7715;5.4817;5.4057;5.3596;5.2681;5.2168;5.2042 -;-;-;-;-;-;-;-;-;- 18236 + 1 0.97 255134.4 1.0 11655 5705 17354 HBL1_DMSO_200M_050219_1,17362 HBL1_DMSO_200M_050219_1,17362,LVADKLEPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17363 83.307 354.0 4179500.0 25 0 1900600.0 + 32587 SAVGGGASI 9 143 718.3759106135002 717.3686341469001 1 718.3777343630791 MULTI CID FTMS 0 0 0 17354 355500.0 0.297204118095373 19 -1.2242355346679688 9 Unmodified _SAVGGGASI_ REV__ENSG00000276644|ENST00000613252|DACH1;REV__nc|ENSG00000276644|Q9UI36-3|DACH1;REV__nc|ENSG00000276644|Q9UI36-4|DACH1;REV__nc|ENSG00000276644|Q9UI36|DACH1 57.47134341890925 0.0274820932774257 3 PPS{M(Oxidation (M))|F}AS{I|L} 7 -1 + 73.383 0.0 0.0 10.229 10.229 84.864 0.0 0.0 0.0 1.0797720911167517 1.0797720911167517 1.0797720911167517 1.0797720911167517 0 2.3807196863200843 1.3979400086720375 1.3234913348214123 0.0 PPS{M(Oxidation (M))|F}AS{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPAS{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L};{[HG]|PP}S{M(Oxidation (M))|F}AS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAPS{I|L};{[TV]|[{I|L}S]}MPAS{I|L};[PS]{M(Oxidation (M))|F}APS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}APPS{I|L};{[TV]|[{I|L}S]}MAPS{I|L} 10.229;10.079;9.9679;9.7758;9.6586;8.9899;8.8479;8.7979;8.2199;7.87 -;-;-;-;-;-;-;-;-;- 1581 + 1 0.97 1008605.6 1.0 11656 5705 17354 HBL1_DMSO_200M_050219_1,17363 HBL1_DMSO_200M_050219_1,17363,SAVGGGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17364 83.315 432.0 443870.0 25 0 45796.0 + 41463 VPLPNVPSI 9 163 468.2817208672013 934.5488888012028 2 468.2818481326103 MULTI CID FTMS 0 0 0 17354 356022.53125 0.0881991398774605 -9 0.6777496337890625 10 Unmodified _VPLPNVPSI_ ENSG00000101421|ENST00000217402|CHMP4B;nc|ENSG00000258469|P59074|CHMP4BP1 67.34385681178166 0.0221257235307089 3 [VP]N{I|L}PVPS{I|L} 9 2 + 56.648 0.0 0.0 6.0615 6.0615 79.954 0.0 0.0 0.0 2.4864192620429293 24.150378042405897 2.4864192620429293 2.4864192620429293 0 1.0682503180159344 0.958607314841775 0.4247425010840047 0.7059771852360797 [VP]N{I|L}PVPS{I|L};[NP]V{I|L}PVPS{I|L};[VP]NVP{I|L}PS{I|L};[NP]VVP{I|L}PS{I|L};[VP]{I|L}NPVPS{I|L};[{I|L}P]VNPVPS{I|L};[VP]QVPVPS{I|L};[{I|L}P]NVPVPS{I|L};[NP]{I|L}VPVPS{I|L};[PS][KP]P{I|L}PS{I|L} 6.0615;5.7954;5.7135;5.4474;5.3136;5.1468;4.9915;4.8247;4.7254;4.6752 -;-;-;-;-;-;-;-;-;- 649 1 0.97 149312.9 1.0 11657 5705 17354 HBL1_DMSO_200M_050219_1,17364 HBL1_DMSO_200M_050219_1,17364,VPLPNVPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17365 83.323 453.0 380230.0 25 0 58771.0 + 7417 EGLKLMNL 8 165 459.2601098010672 916.5056666689344 2 459.2600890994072 MULTI CID FTMS 0 0 0 17354 338752.4375 0.9217145195180998 -2 0.1786041259765625 11 Unmodified _EGLKLMNL_ ENSG00000177200|ENST00000447540|CHD9;ENST00000569225.5_1_16:53269177-53281416:+|nuORF;nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9 85.27202061508552 0.0687763219216887 3 {[DA]|[EG]}{I|L}K{I|L}MN{I|L} 8 0 + 71.208 0.0 0.0 7.7695 7.7695 83.056 0.0 0.0 0.0 1.3910044485599968 1.3910044485599968 1.3910044485599968 1.3910044485599968 0 2.167735320183944 2.0 0.0 1.4916440611282624 + + {[DA]|[EG]}{I|L}K{I|L}MN{I|L};{[DA]|[EG]}{I|L}K{I|L}M{[QV]|[N{I|L}]|[RA]|[KV]};{[DA]|[EG]}{I|L}K{I|L}MQV;{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}M{[QV]|[N{I|L}]|[RA]|[KV]};{[DA]|[EG]}{I|L}K{I|L}MGG{I|L};{[DA]|[EG]}{I|L}K{I|L}M[AG]V;{[VA]|[{I|L}G]}EK{I|L}M{[QV]|[N{I|L}]|[RA]|[KV]};{[DA]|[EG]}{I|L}K{I|L}AAC{I|L};{NN|[MP]|[D{I|L}]|[EV]}MK{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RS{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]} 7.7695;7.6177;7.0747;6.0944;6.0102;5.3154;4.7584;4.2141;4.1571;3.2081 +;+;-;-;-;-;-;-;-;- + 1078 + 1 0.97 134658.6 1.0 11658 5705 17354 HBL1_DMSO_200M_050219_1,17365 HBL1_DMSO_200M_050219_1,17365,EGLKLMNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17366 83.326 67.0 953700.0 25 0 73072.0 + 29315 QILEAIPQV 9 101 505.797827591791 1009.581102250382 2 505.7982360720634 MULTI CID FTMS 0 0 0 17354 302066.84375 0.7438681015998706 -1 0.052276611328125 12 Unmodified _QILEAIPQV_ ENSG00000100938|ENST00000399440|GMPR2;ENST00000559287.5_1_14:24702733-24706289:+|nuORF;ENST00000559606.1_1_14:24704927-24706289:+|nuORF;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2 26.88365393820708 0.1891292719743517 3 [Q{I|L}]T{[HG]|PP}{I|L}[WR] 8 6 + 28.746 0.0 0.0 2.8473 2.8473 71.095 0.0 0.0 0.0 2.882418650521359 0.6694678963061307 0.6694678963061307 2.882418650521359 0 0.0 1.3010299956639813 0.2614393726401688 0.4247425010840047 [Q{I|L}]T{[HG]|PP}{I|L}[WR];{[TV]|[{I|L}S]}[HK]A{I|L}[WR];{[TV]|[{I|L}S]}AA{[HG]|PP}{I|L}[WR];[{I|L}A]GT{[HG]|PP}{I|L}[WR] 2.8473;2.5618;2.2015;0.64435 -;-;-;- 357 1 0.97 53450.0 1.0 11659 5705 17354 HBL1_DMSO_200M_050219_1,17366 HBL1_DMSO_200M_050219_1,17366,QILEAIPQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17367 83.332 357.0 293200.0 25 0 37667.0 + -1 SQNPILTSL 9 104 972.5274020559524 1943.0402511787047 2 972.5303832888604 MULTI CID FTMS 0 0 0 17354 305755.0625 0.7327779621425792 3 -0.2419509887695312 13 ENSG00000125686|ENST00000300651|MED1 3 [{I|L}P]YVV{[QG]|[NA]}VW 9 -1 12.858 0.0 0.0 0.66177 0.0 0.0 0.0 898.4653637914254 898.4653637914254 -1.4466399886967274 0.0 -1.4466399886967274 0.0 0 0.3807196863200844 0.0 0.0 0.0 [{I|L}P]YVV{[QG]|[NA]}VW 0.66177 - 8111 1 0.97 72491.6 1.0 11660 5705 17354 HBL1_DMSO_200M_050219_1,17367 HBL1_DMSO_200M_050219_1,17367, False False SQNPILTSL 83.332006 972.53038328886 2735679.5 17354.0 ENSG00000125686|ENST00000300651|MED1 5.602462291717529 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17368 83.341 484.0 255070.0 25 0 42349.0 + 10468 FTIRDLQRL 9 120 387.8963655277608 1160.6672671834822 3 387.8963500857353 MULTI CID FTMS 0 0 0 17354 284318.5 0.3226963309300566 3 -0.2419509887695312 14 Unmodified _FTIRDLQRL_ ENSG00000149262|ENST00000534064|INTS4;ENST00000533180.1_1_11:77612465-77632469:-|nuORF 44.391923383255 0.0526658857881241 3 {M(Oxidation (M))|F}{I|L}TRD{I|L}QR{I|L} 9 2 + 68.937 0.0 0.0 5.9395 5.9395 76.084 0.0 0.0 0.0 12.702815993690804 0.3778856088939903 0.3778856088939903 0.3778856088939903 0 0.3807196863200844 0.0 0.3807196863200844 0.9163865622122672 {M(Oxidation (M))|F}{I|L}TRD{I|L}QR{I|L};{M(Oxidation (M))|F}{I|L}TRD{I|L}Q{I|L}R;{M(Oxidation (M))|F}T{I|L}RD{I|L}QR{I|L};{M(Oxidation (M))|F}T{I|L}RD{I|L}Q{I|L}R;{M(Oxidation (M))|F}{I|L}TRD{I|L}[AG]R{I|L};{M(Oxidation (M))|F}{I|L}TRD{I|L}[AG]{I|L}R;{M(Oxidation (M))|F}T{I|L}RD{I|L}[AG]R{I|L};{M(Oxidation (M))|F}T{I|L}RD{I|L}[AG]{I|L}R;{M(Oxidation (M))|F}{I|L}TRQQ[KQ]{I|L};{M(Oxidation (M))|F}T{I|L}RQQ[KQ]{I|L} 5.9395;5.9069;5.6532;5.6206;5.1461;5.1136;4.8598;4.8273;3.3443;3.0581 -;-;+;-;-;-;-;-;-;- + 396 + 1 0.97 100226.7 1.0 11661 5705 17354 HBL1_DMSO_200M_050219_1,17368 HBL1_DMSO_200M_050219_1,17368,FTIRDLQRL True True FTIRDLQRL 83.340546 387.896350085735 14848353.0 17354.0 ENSG00000149262|ENST00000534064|INTS4;;ENST00000533180.1_1_11:77612465-77632469:-|nuORF 4.1944780349731445 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17369 83.347 344.0 310450.0 25 0 24511.0 + 21165 LPAVSLEV 8 109 827.4883416008829 826.4810651342829 1 827.4906494021416 MULTI CID FTMS 0 0 0 17354 258672.875 0.3298243583999674 4 -0.299407958984375 15 Unmodified _LPAVSLEV_ ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A 74.39630413441286 0.1057069479668299 3 [{I|L}P]G{I|L}SE{I|L}V 8 4 + 76.433 0.0 0.0 9.248 9.248 82.721 0.0 0.0 0.0 20.96910013008056 16.40978057358332 16.40978057358332 0.1230450566754512 0 0.0 1.3979400086720375 1.1307196863200843 0.0 [{I|L}P]G{I|L}SE{I|L}V;[{I|L}P]AVSE{I|L}V;[{I|L}P]G{I|L}S{I|L}EV;[{I|L}P]AVS{I|L}EV;[{I|L}P]GS{I|L}E{I|L}V;[{I|L}P]GS{I|L}{I|L}EV;[{I|L}P]GSE{I|L}{I|L}V;[{I|L}P]SG{I|L}E{I|L}V;[{I|L}P]SG{I|L}{I|L}EV;[PA]V{I|L}SE{I|L}V 9.248;9.2331;9.1066;9.0917;8.3874;8.246;7.4884;7.1774;7.0361;6.7108 -;-;-;+;-;-;-;-;-;- + 1485 1 0.97 76280.6 1.0 11662 5705 17354 HBL1_DMSO_200M_050219_1,17369 HBL1_DMSO_200M_050219_1,17369,LPAVSLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17370 83.354 380.0 116270.0 25 0 8171.1 -1 HLKKRKTWMI 10 96 678.8998776260468 1355.7852023188934 2 678.8997070193291 MULTI CID FTMS 0 0 0 17354 214551.40625 0.5403914285993142 5 -0.3513565063476562 16 Oxidation (M) _HLKKRKTWM(Oxidation (M))I_ ENST00000357607.6_1_X:15544172-15549526:+|nuORF 4.3292370932331545 0.7066112369704343 3 {I|L} 1 -1 11.783 0.0 0.0 0.86907 0.0 0.0 1224.6900465345168 0.0 1224.6900465345168 0.0 1.2981865525287797 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.86907 + + 143 + 1 0.97 40614.1 1.0 11663 5705 17354 HBL1_DMSO_200M_050219_1,17370 HBL1_DMSO_200M_050219_1,17370,HLKKRKTWMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17371 83.362 481.0 311050.0 25 0 40391.0 21009 LNVHFFQKLHL 11 146 465.9356350799949 1394.7850758401846 3 465.9351989626884 MULTI CID FTMS 0 0 0 17354 203260.78125 0.7141883044692048 -1 0.052276611328125 17 Unmodified _LNVHFFQKLHL_ ENST00000491389.1_1_21:48068261-48069756:+|nuORF 4.11662792887243 0.8557254166428417 3 [{I|L}A]{NN|[MP]|[D{I|L}]|[EV]}K{M(Oxidation (M))|F}P 7 8 27.605 0.0 0.0 1.9792 0.0 0.0 0.0 607.3126737375518 607.3126737375518 14.1102359793625 0.0 0.0 0.0 0 0.3252574989159953 1.3010299956639813 0.3807196863200844 0.0 [{I|L}A]{NN|[MP]|[D{I|L}]|[EV]}K{M(Oxidation (M))|F}P 1.9792 - 423 1 0.97 123580.5 1.0 11664 5705 17354 HBL1_DMSO_200M_050219_1,17371 HBL1_DMSO_200M_050219_1,17371,LNVHFFQKLHL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17372 83.371 435.0 594740.0 25 0 232580.0 + 10760 FYLFLTTTI 9 111 1118.617972586908 1117.610696120308 1 1119.618823230267 MULTI CID FTMS 0 0 0 17354 253063.25 1.0 0 0.0 18 Unmodified _FYLFLTTTI_ REV__ENSG00000088836|ENST00000642402|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-1|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-4|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11 13.50788311687929 0.4710407108020397 3 V{I|L}T{I|L}{[DS]|[MA]|[CV]|TT} 6 -1 19.887 0.0 0.0 1.7794 0.0 0.0 471.21602065254064 0.0 471.21602065254064 0.0 8.411538829604503 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 V{I|L}T{I|L}{[DS]|[MA]|[CV]|TT} 1.7794 - 800 1 0.97 166443.4 1.0 11665 5705 17354 HBL1_DMSO_200M_050219_1,17372 HBL1_DMSO_200M_050219_1,17372,FYLFLTTTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17373 83.38 513.0 212630.0 25 0 28095.0 + 11448 GIATIVSHI 9 136 455.7712203434208 909.5278877536416 2 455.7712890505791 MULTI CID FTMS 0 0 0 17354 191544.484375 0.0029067474657227 33 -2.4974441528320312 19 Unmodified _GIATIVSHI_ REV__ENSG00000064703|ENST00000369702|DDX20 30.22481116460888 0.1466181017706357 3 [VG]APQA 6 -1 30.977 0.0 0.0 3.4058 0.0 0.0 0.0 383.22879042381663 383.22879042381663 14.237671578831424 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.5649093276264391 [VG]APQA 3.4058 - 864 1 0.97 88582.2 1.0 11666 5705 17354 HBL1_DMSO_200M_050219_1,17373 HBL1_DMSO_200M_050219_1,17373,GIATIVSHI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17374 83.387 403.0 136440.0 25 0 9170.0 16596 KDSKYMEETL 10 106 622.2958720100562 1242.5771910869123 2 622.2959472537041 MULTI CID FTMS 0 0 0 17354 186173.9375 0.1079651383841309 6 -0.3791427612304687 20 Unmodified _KDSKYMEETL_ ENSG00000132932|ENST00000381655|ATP8A2;ENST00000491840.1_1_13:26141407-26501380:+|nuORF;nc|ENSG00000132932|Q9NTI2-1|ATP8A2 13.042465956692816 0.6287021003332052 3 MSAC(Carbamidomethyl (C))S 5 9 18.175 0.0 0.0 1.4627 0.0 0.0 621.312462758862 82.06703363590077 703.3794963947628 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.0 MSAC(Carbamidomethyl (C))S 1.4627 - 175 + 1 0.97 48879.5 1.0 11667 5705 17354 HBL1_DMSO_200M_050219_1,17374 HBL1_DMSO_200M_050219_1,17374,KDSKYMEETL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17376 83.391 3.6 5829700.0 25 0 444450.0 + 22568 LPWTAEQVV 9 50 521.7820976720893 1041.5496424109783 2 521.7825195193291 MULTI CID FTMS 0 0 0 17375 12172524.0 0.290242879817915 4 -0.2275161743164062 1 Unmodified _LPWTAEQVV_ ENSG00000175216|ENST00000529230|CKAP5;ENST00000528593.1_1_11:46804822-46806223:-|nuORF;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 28.486842064014134 0.1687311288560894 3 [WP]TA{I|L}EQVV 9 2 + 67.285 0.0 0.0 6.4601 6.4601 82.169 0.0 0.0 0.0 19.366130211356065 50.295540574256776 19.366130211356065 3.0102999566398125 0 0.8935078169319297 1.2218487496163564 0.4247425010840047 0.0 [WP]TA{I|L}EQVV;[WP]TAE{I|L}QVV;[WP]TAEQ{I|L}VV;[WP]TA{I|L}E[AG]VV;[WP]TAE{I|L}[AG]VV;[WP]TAE[AG]{I|L}VV;[{I|L}P][MN]{I|L}EQVV;[{I|L}P][MN]E{I|L}QVV;[{I|L}P][MN]EQ{I|L}VV;[{I|L}P][MN]{I|L}E[AG]VV 6.4601;6.1711;5.713;5.576;5.287;4.8289;4.5668;4.2778;3.8197;3.6827 -;-;-;-;-;-;-;-;-;- 124 1 0.963 24847.8 1.0 11668 5706 17375 HBL1_DMSO_200M_050219_1,17376 HBL1_DMSO_200M_050219_1,17376,LPWTAEQVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17377 83.393 1.5 12644000.0 25 0 1259800.0 + -1 AIMPSALAL 9 46 451.7527689299804 901.4909849267608 2 451.7540466189384 MULTI CID FTMS 0 0 0 17375 22673638.0 0.2894056146351465 20 -1.3082351684570312 2 Oxidation (M) _AIM(Oxidation (M))PSALAL_ REV__ENSG00000196531|ENST00000454682|NACA;REV__nc|ENSG00000196531|E9PAV3-2|NACA 19.438996006549623 0.310492472477042 3 [{I|L}A]{M(Oxidation (M))|F}PAS 6 -1 31.86 0.0 0.0 3.5341 0.0 0.0 0.0 312.1904227531858 312.1904227531858 16.91122510072759 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS 3.5341 - 27 1 0.963 21618.3 1.0 11669 5706 17375 HBL1_DMSO_200M_050219_1,17377 HBL1_DMSO_200M_050219_1,17377,AIMPSALAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17378 83.394 4.0 11631000.0 25 0 2381200.0 + 20373 LLGPRLVLA 9 66 476.32097924230936 950.6274055514187 2 476.3210937380791 MULTI CID FTMS 0 0 0 17375 11319458.0 0.449799209873168 -3 0.3024444580078125 3 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 34.10243960390752 0.1078313939113124 3 {I|L}{I|L}G 3 6 31.879 0.0 0.0 3.3535 0.0 0.0 0.0 664.4185274713499 664.4185274713499 12.256499699645858 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}{I|L}G 3.3535 + + 20 + 1 0.963 42951.5 1.0 11670 5706 17375 HBL1_DMSO_200M_050219_1,17378 HBL1_DMSO_200M_050219_1,17378,LLGPRLVLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17379 83.395 3.0 14137000.0 25 0 1966300.0 + 45121 YQAPDIDVQL 10 70 581.2920547809874 1160.5695566287748 2 581.2933837771416 MULTI CID FTMS 0 0 0 17375 8903042.0 0.227191652901175 -5 0.4640884399414062 4 Unmodified _YQAPDIDVQL_ ENSG00000105373|ENST00000246802|NOP53;ENST00000600410.5_1_19:48257983-48259211:+|nuORF 14.40537977576856 0.6058337302021266 3 SSC[DP]{I|L}GS{I|L}[TP] 11 8 34.596 0.0 0.0 2.981 0.0 0.0 85.08983809638828 0.0 85.08983809638828 0.0 19.98197937865588 0.0 0.0 0 0.0 0.0 0.5 0.0 SSC[DP]{I|L}GS{I|L}[TP] 2.981 - 630 1 0.963 41637.2 1.0 11671 5706 17375 HBL1_DMSO_200M_050219_1,17379 HBL1_DMSO_200M_050219_1,17379,YQAPDIDVQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17380 83.396 6.6 5755400.0 25 0 921820.0 19141 LEAFHLYLL 9 55 559.8141901816448 1117.6138274300895 2 559.8140746951103 MULTI CID FTMS 0 0 0 17375 7937934.5 0.803097820104604 1 -0.0497589111328125 5 Unmodified _LEAFHLYLL_ ENSG00000182885|ENST00000333493|ADGRG3 23.1484247019978 0.2366544122328345 3 TSY{I|L}{I|L} 5 6 49.24 0.0 0.0 4.4058 0.0 0.0 522.3052235334 0.0 522.3052235334 0.0 36.332946754800375 0.0 0.0 0 0.8807196863200843 0.0 1.0 0.0 TSY{I|L}{I|L} 4.4058 - 75 1 0.963 35178.6 1.0 11672 5706 17375 HBL1_DMSO_200M_050219_1,17380 HBL1_DMSO_200M_050219_1,17380,LEAFHLYLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17381 83.397 19.0 2986100.0 25 0 385280.0 + 18311 KVLDLKINL 9 89 528.3447695415001 1054.6749861498 2 528.3449584841728 MULTI CID FTMS 0 0 0 17375 2724439.25 1.0 0 0.0 6 Unmodified _KVLDLKINL_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 57.10758569107544 0.0276834916274374 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}K{I|L}N{I|L} 9 0 + 58.177 0.0 0.0 5.5161 5.5161 88.675 0.0 0.0 0.0 34.81730022313528 11.962724883926654 11.962724883926654 16.822581265925436 0 1.4802046884880935 0.6989700043360187 0.0 1.7614393726401687 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}K{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}K{I|L}GG{I|L};{NN|[MP]|[D{I|L}]|[EV]}VK{I|L}K{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}KVK{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}VK{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}KV{I|L}K{I|L}N{I|L};[K{I|L}]D{I|L}VK{I|L}N{I|L};[K{I|L}]DV{I|L}K{I|L}N{I|L};{[SA]|[TG]}VV{I|L}VK{I|L}N{I|L};{[SA]|[TG]}VVV{I|L}K{I|L}N{I|L} 5.5161;3.9211;2.8533;2.7323;2.5219;2.1905;1.0096;0.67821;0.33642;0.0050504 +;-;-;-;-;-;-;-;-;- + 354 + 1 0.963 48830.3 1.0 11673 5706 17375 HBL1_DMSO_200M_050219_1,17381 HBL1_DMSO_200M_050219_1,17381,KVLDLKINL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17382 83.398 34.0 1148800.0 25 0 265220.0 -1 TVTICMDYI 9 66 566.256268549092 1130.497984164984 2 566.2564575076103 MULTI CID FTMS 0 0 0 17375 1521707.0 1.0 0 0.0 7 Carbamidomethyl (C),Oxidation (M) _TVTIC(Carbamidomethyl (C))M(Oxidation (M))DYI_ ENSG00000076770|ENST00000370853|MBNL3;nc|ENSG00000076770|Q9NUK0-2|MBNL3;nc|ENSG00000076770|Q9NUK0-3|MBNL3;nc|ENSG00000076770|Q9NUK0-4|MBNL3;nc|ENSG00000076770|Q9NUK0-5|MBNL3 8.593279151180031 0.6146971463335029 3 {[TV]|[{I|L}S]}A 3 -1 25.942 0.0 0.0 2.2948 0.0 0.0 0.0 856.3203773136746 856.3203773136746 11.962724883926654 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}A 2.2948 - 30 1 0.963 32574.8 1.0 11674 5706 17375 HBL1_DMSO_200M_050219_1,17382 HBL1_DMSO_200M_050219_1,17382,TVTICMDYI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17383 83.4 24.0 2370800.0 25 0 372360.0 5969 DQRNTKLY 8 69 519.2711558698423 0 519.2703124880791 PEAK CID FTMS 0 0 0 17375 1177565.0 0.6107324138060695 -3 0.3024444580078125 8 Unmodified _DQRNTKLY_ ENSG00000134042|ENST00000398439|MRO;nc|ENSG00000134042|Q9BYG7-2|MRO;nc|ENSG00000134042|Q9BYG7-5|MRO;nc|ENSG00000134042|Q9BYG7-6|MRO 10.183394434864962 0.5394990767616434 3 Y{I|L}PG 4 8 17.167 0.0 0.0 1.6562 0.0 0.0 535.2324534859753 68.05147730045155 603.2839307864268 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}PG 1.6562 - 33 + 1 0.963 50504.3 1.0 11675 5706 17375 HBL1_DMSO_200M_050219_1,17383 HBL1_DMSO_200M_050219_1,17383,DQRNTKLY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17384 83.401 27.0 1415800.0 25 0 181590.0 + 2762 ATMPDLYHL 9 70 530.7601362259248 1059.5057195186496 2 530.7606078982353 MULTI CID FTMS 0 0 0 17375 1125087.75 0.6078184887609959 1 -0.0497589111328125 9 Unmodified _ATMPDLYHL_ ENSG00000132792|ENST00000361383|CTNNBL1;ENST00000373473.5_1_20:36374873-36393614:+|nuORF;nc|ENSG00000132792|Q8WYA6-4|CTNNBL1 44.40701690623563 0.0526327925666318 3 [TA]MPD{I|L}YH{I|L} 9 0 + 53.822 0.0 0.0 5.08 5.08 87.01 0.0 0.0 0.0 39.21835643169331 11.082268588648247 11.082268588648247 16.0879337398693 0 0.0 1.3010299956639813 0.0 0.0 + + [TA]MPD{I|L}YH{I|L};[TA]MPD{I|L}[WQ]V;{[TV]|[{I|L}S]}[KC]{I|L}DPM[PG];[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}DPM[PG];{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QA]PM[PG] 5.08;3.5615;1.7814;1.2879;0.29576 +;-;-;-;- + 93 + 1 0.963 36052.1 1.0 11676 5706 17375 HBL1_DMSO_200M_050219_1,17384 HBL1_DMSO_200M_050219_1,17384,ATMPDLYHL True True ATMPDLYHL 83.400822 530.760607898235 13303734.0 17375.0 nc|ENSG00000132792|Q8WYA6-4|CTNNBL1;;ENSG00000132792|ENST00000361383|CTNNBL1;;ENST00000373473.5_1_20:36374873-36393614:+|nuORF 11.336649576822916 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17385 83.402 47.0 1126900.0 25 0 124050.0 + 1562 ALLDRIVSV 9 78 493.30601426922345 984.5974756052468 2 493.3061401247978 MULTI CID FTMS 0 0 0 17375 877644.9375 0.1320946537817759 -3 0.3024444580078125 10 Unmodified _ALLDRIVSV_ ENSG00000155561|ENST00000285968|NUP205 31.26834338654808 0.1333407332142048 3 [{I|L}A]{I|L} 3 6 34.265 0.0 0.0 3.4801 0.0 0.0 0.0 684.3693941705686 684.3693941705686 6.829759131723421 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + [{I|L}A]{I|L} 3.4801 + + 79 + 1 0.963 49229.4 1.0 11677 5706 17375 HBL1_DMSO_200M_050219_1,17385 HBL1_DMSO_200M_050219_1,17385,ALLDRIVSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17386 83.403 53.0 381800.0 25 0 31286.0 + 15271 IPHPLIMGV 9 48 488.7861152296468 975.5576775260936 2 488.7854797244072 MULTI CID FTMS 0 0 0 17375 858507.25 0.1208492299991286 5 -0.2553024291992187 11 Unmodified _IPHPLIMGV_ ENSG00000166200|ENST00000388901|COPS2;ENST00000559016.1_1_15:49426483-49429634:-|nuORF;nc|ENSG00000166200|P61201-2|COPS2 28.17323086031832 0.1727213568982648 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[{I|L}P]{I|L}MR 8 4 + 22.324 0.0 0.0 2.2884 2.2884 80.945 0.0 0.0 0.0 3.423552944845479 9.64841568716295 3.423552944845479 22.32447808893326 0 0.7429928190999391 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[{I|L}P]{I|L}MR 2.2884 - 28 1 0.963 22189.6 1.0 11678 5706 17375 HBL1_DMSO_200M_050219_1,17386 HBL1_DMSO_200M_050219_1,17386,IPHPLIMGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17387 83.406 95.0 1019000.0 25 0 179760.0 + 14403 IFIDRDPTVF 10 83 611.8277415857054 1221.6409302382108 2 611.8271972537041 MULTI CID FTMS 0 0 0 17375 895828.375 0.2364040787780159 4 -0.2275161743164062 12 Unmodified _IFIDRDPTVF_ ENSG00000160410|ENST00000291842|SHKBP1;ENST00000595523.5_1_19:41083305-41084039:+|nuORF;ENST00000598558.5_1_19:41083239-41086365:+|nuORF;ENST00000600552.5_1_19:41083005-41084032:+|nuORF;nc|ENSG00000160410|Q8TBC3-2|SHKBP1 57.24910588100465 0.0438022649904578 3 {I|L}{M(Oxidation (M))|F}{I|L}D[RD][TP]V{M(Oxidation (M))|F} 10 0 + 46.805 0.0 0.0 3.8313 3.8313 82.045 0.0 0.0 0.0 10.822565157857952 10.822565157857952 10.822565157857952 10.822565157857952 0 1.7302046884880935 0.0 0.3054621874040891 0.3807196863200844 + + {I|L}{M(Oxidation (M))|F}{I|L}D[RD][TP]V{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}VA{I|L}[{M(Oxidation (M))|F}T][TP]V{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}VA{I|L}V{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}VAV{[CP]|[EA]}V{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}VV[W{M(Oxidation (M))|F}][TP]V{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}VAV{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}VVA{[CP]|[EA]}V{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}VA{I|L}V[W{M(Oxidation (M))|F}]{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}VVA{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}VAV{I|L}[W{M(Oxidation (M))|F}]{I|L}{M(Oxidation (M))|F} 3.8313;2.9454;2.8454;2.8093;2.6536;2.6465;2.5629;2.5535;2.4;2.3546 +;-;-;-;-;-;-;-;-;- + 1076 + 1 0.963 75344.4 1.0 11679 5706 17375 HBL1_DMSO_200M_050219_1,17387 HBL1_DMSO_200M_050219_1,17387,IFIDRDPTVF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17388 83.407 30.0 1540200.0 25 0 168420.0 + 43289 GTINDISVLRV 11 64 593.8225332703377 1185.6305136074752 2 593.8201171755791 MULTI CID FTMS 0 0 0 17375 687821.375 0.5829789506260017 6 -0.3001937866210937 13 Unmodified _WIVQCAPNKK_ nc|ENSG00000266967|Q9BTE6-2|AARSD1;nc|ENSG00000266967|Q9BTE6-3|AARSD1;ENSG00000266967|ENST00000427569|AARSD1;ENST00000441280.7_1_17:41108193-41116457:-|nuORF;ENST00000416949.5_1_17:41109156-41116489:-|nuORF 10.073929032068715 0.6785112666868882 3 W{I|L}PNCSV 7 7 69.429 0.0 0.0 5.8559 0.0 0.0 0.0 383.24216638736567 383.24216638736567 53.23145724778165 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 W{I|L}PNCSV 5.8559 - 96 + 1 0.963 43556.2 1.0 11680 5706 17375 HBL1_DMSO_200M_050219_1,17388 HBL1_DMSO_200M_050219_1,17388,WIVQCAPNKK False False GTINDISVLRV 83.406707 593.820117175579 5410103.0 17375.0 nc|ENSG00000266967|Q9BTE6-2|AARSD1;;nc|ENSG00000266967|Q9BTE6-3|AARSD1;;ENSG00000266967|ENST00000427569|AARSD1;;ENST00000441280.7_1_17:41108193-41116457:-|nuORF;;ENST00000416949.5_1_17:41109156-41116489:-|nuORF 3.7674405574798575 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17389 83.411 239.0 631840.0 25 0 69356.0 -1 0 126 670.672931261179 2008.996964383737 3 671.0076782107353 MULTI CID FTMS 0 0 0 17375 666962.25 0.3417156608518347 1 -0.0497589111328125 14 3 [H{I|L}][NP]{I|L}N[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]} 17 -1 + 90.452 0.0 0.0 4.5023 4.5023 54.019 0.0 0.0 0.0 0.4968123769230459 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.0 0.7059771852360797 [H{I|L}][NP]{I|L}N[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};[H{I|L}][NP]{I|L}N[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}K{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}Q{[WT]|[RM]}[YV]CDG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}Q{[WT]|[RM]}[YV]CDG{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};[H{I|L}][NP]{I|L}[{M(Oxidation (M))|F}T]{I|L}C(Carbamidomethyl (C))G{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};[H{I|L}][NP]{I|L}[{M(Oxidation (M))|F}T]{I|L}C(Carbamidomethyl (C))G{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};{[TV]|[{I|L}S]}Q{[WT]|[RM]}T[YT]DG{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};{[TV]|[{I|L}S]}Q{[WT]|[RM]}T[YT]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};{[QS]|[NT]}{I|L}{[WT]|[RM]}[YV]CDG{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};{[QS]|[NT]}{I|L}{[WT]|[RM]}[YV]CDG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]} 4.5023;4.5023;4.4776;4.4776;4.2147;4.2147;4.057;4.057;3.9218;3.9218 -;-;-;-;-;-;-;-;-;- 5433 1 0.963 118406.1 1.0 11681 5706 17375 HBL1_DMSO_200M_050219_1,17389 HBL1_DMSO_200M_050219_1,17389, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17390 83.416 234.0 329370.0 25 0 62275.0 + 17531 KPLQLPFWWKV 11 105 721.4219412597154 1440.8293295862306 2 721.4197875857353 MULTI CID FTMS 0 0 0 17375 662336.625 0.8944697499272853 -2 0.176116943359375 15 Unmodified _KPLQLPFWWKV_ REV__ENSG00000163521|ENST00000295759|GLB1L;REV__nc|ENSG00000163521|Q6UWU2-2|GLB1L 1.1933415558491238 0.8695176722560516 3 {I|L} 1 -1 5.4846 0.0 0.0 0.38065 0.0 0.0 808.4381685528307 516.2845487922074 1324.722717345038 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.38065 + + 70 + 1 0.963 68304.9 1.0 11682 5706 17375 HBL1_DMSO_200M_050219_1,17390 HBL1_DMSO_200M_050219_1,17390,KPLQLPFWWKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17391 83.42 240.0 487440.0 25 0 38669.0 -1 0 94 807.4023194990394 3225.5801721297576 4 807.9028808474541 MULTI CID FTMS 0 0 0 17375 540955.8125 1.0 0 0.0 16 3 WN 2 -1 15.217 0.0 0.0 0.47175 0.0 0.0 2601.292022584972 321.15754114322505 2922.449563728197 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 WN 0.47175 - 428 + 1 0.963 91432.1 1.0 11683 5706 17375 HBL1_DMSO_200M_050219_1,17391 HBL1_DMSO_200M_050219_1,17391, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17392 83.421 50.0 786460.0 25 0 67045.0 -1 EIEYMMEL 8 80 545.2273100115766 1088.4400670899531 2 545.7282592654228 MULTI CID FTMS 0 0 0 17375 533776.625 0.9392393068979616 -2 0.176116943359375 17 2 Oxidation (M) _EIEYM(Oxidation (M))M(Oxidation (M))EL_ ENSG00000132669|ENST00000255006|RIN2;nc|ENSG00000132669|Q8WYP3-2|RIN2 5.230669730166228 0.792582437072536 3 {I|L} 1 -1 13.979 0.0 0.0 1.2844 0.0 0.0 957.344987599522 0.0 957.344987599522 0.0 -3.979400086720375 -3.979400086720375 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2844 + + 46 + 1 0.963 35138.2 1.0 11684 5706 17375 HBL1_DMSO_200M_050219_1,17392 HBL1_DMSO_200M_050219_1,17392,EIEYMMEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17393 83.426 267.0 329830.0 25 0 45845.0 + 12461 GVAAHGGP 8 86 665.338207489375 664.330931022775 1 665.3395873904228 MULTI CID FTMS 0 0 0 17375 483690.53125 0.5846865441721154 1 -0.0497589111328125 18 Unmodified _GVAAHGGP_ REV__ENST00000471335.5_1_2:72411272-72562392:-|nuORF 11.114462752807354 0.7467182956244686 3 V 1 -1 12.764 0.0 0.0 1.9214 0.0 0.0 547.2513849796094 0.0 547.2513849796094 0.0 2.050872325445248 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.9214 + + 29 + 1 0.963 72881.9 1.0 11685 5706 17375 HBL1_DMSO_200M_050219_1,17393 HBL1_DMSO_200M_050219_1,17393,GVAAHGGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17394 83.432 282.0 1173200.0 25 0 130270.0 + 30662 RFPEELTQTF 10 161 634.3192064214766 1266.623859909753 2 634.3173705935478 MULTI CID FTMS 0 0 0 17375 454558.5 0.5558979278957431 -5 0.4640884399414062 19 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 59.36838082759317 0.0382430275470746 3 [{I|L}P]{[NV]|[RG]}PNHTQT{M(Oxidation (M))|F} 11 6 + 72.727 0.0 0.0 5.7418 5.7418 85.832 0.0 0.0 0.0 5.082885525340799 44.6451079133696 5.082885525340799 8.86490725172483 0 0.8494850021680094 1.3010299956639813 1.079689690656103 0.3494850021680094 [{I|L}P]{[NV]|[RG]}PNHTQT{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[RP]PNHTQT{M(Oxidation (M))|F};[{I|L}P]{[NV]|[RG]}PNHT[AG]T{M(Oxidation (M))|F};[{I|L}P]{[NV]|[RG]}PGGHTQT{M(Oxidation (M))|F};[K{I|L}][C(Carbamidomethyl (C))Q]E{I|L}TQT{M(Oxidation (M))|F};{[VA]|[{I|L}G]}A[C(Carbamidomethyl (C))K]E{I|L}TQT{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}][EP]E{I|L}TQT{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}E{I|L}TQT{M(Oxidation (M))|F};[{I|L}V][WM]E{I|L}TQT{M(Oxidation (M))|F} 5.7418;5.0419;5.0211;5.0211;4.7215;4.6899;4.6727;4.6718;4.6093;4.4764 -;-;-;-;-;-;-;+;-;- + 5471 1 0.963 240975.0 1.0 11686 5706 17375 HBL1_DMSO_200M_050219_1,17394 HBL1_DMSO_200M_050219_1,17394,RFPEELTQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17395 83.437 301.0 222670.0 25 0 41718.0 + 22997 LSHFRLPLSVL 11 89 641.3851135857544 1280.7556742383088 2 641.3858520388603 MULTI CID FTMS 0 0 0 17375 361644.125 0.2551643575498814 4 -0.2275161743164062 20 Unmodified _LSHFRLPLSVL_ REV__ENST00000547267.2_1_12:110429543-110429603:-|nuORF 2.498486711656943 0.8633599123570009 3 {I|L} 1 -1 10.713 0.0 0.0 0.83649 0.0 0.0 1149.6606710418228 0.0 1149.6606710418228 0.0 3.0001310644702475 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.83649 + + 71 + 1 0.963 59251.6 1.0 11687 5706 17375 HBL1_DMSO_200M_050219_1,17395 HBL1_DMSO_200M_050219_1,17395,LSHFRLPLSVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17397 83.441 67.0 600200.0 25 0 99351.0 + 12026 GQAEPESVLLV 11 78 571.3092834216933 1140.6040139101865 2 571.3093139529228 MULTI CID FTMS 0 0 0 17396 975922.5 0.6432304464619311 1 -0.0683517456054687 1 Unmodified _GQAEPESVLLV_ ENSG00000127054|ENST00000435064|INTS11;ENST00000461514.6_1_1:1248044-1249114:-|nuORF;ENST00000470030.6_1_1:1247241-1248711:-|nuORF;ENST00000478641.5_1_1:1248044-1248711:-|nuORF;ENST00000485710.5_1_1:1247522-1249186:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 47.594388314883695 0.1309523012099263 3 {[QG]|[NA]}AE[VS][EP]{I|L}{I|L}V 11 4 + 34.511 0.0 0.0 3.0257 3.0257 76.45 0.0 0.0 0.0 6.8180482242980815 0.8477228263835173 0.8477228263835173 6.8180482242980815 0 0.7742275032520141 0.0 0.3494850021680094 1.055462187404089 {[QG]|[NA]}AE[VS][EP]{I|L}{I|L}V;QQE[VS][EP]{I|L}{I|L}V;[WP][C(Carbamidomethyl (C))K][EP]{I|L}{I|L}V 3.0257;2.428;1.5875 -;-;- 228 1 0.963 38234.6 1.0 11688 5707 17396 HBL1_DMSO_200M_050219_1,17397 HBL1_DMSO_200M_050219_1,17397,GQAEPESVLLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17398 83.447 293.0 328590.0 25 0 25814.0 -1 0 104 915.4426033316182 1828.8706537300363 2 915.9453002810478 MULTI CID FTMS 0 0 0 17396 80544.5 0.0532561006532996 5 -0.2504348754882812 2 3 Y{M(Oxidation (M))|F}AN{[YD]|[{M(Oxidation (M))|F}M]}{I|L}AAE 10 -1 42.139 0.0 0.0 2.3041 0.0 0.0 358.22596880146176 310.11826502017817 668.3442338216399 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0451140161145327 0.3807196863200844 Y{M(Oxidation (M))|F}AN{[YD]|[{M(Oxidation (M))|F}M]}{I|L}AAE 2.3041 - 9809 + 1 0.963 71448.1 1.0 11689 5707 17396 HBL1_DMSO_200M_050219_1,17398 HBL1_DMSO_200M_050219_1,17398, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17399 83.448 53.0 1287800.0 25 0 203070.0 + 17882 KQMEQISQFL 10 83 626.3237001870148 1250.6328474408294 2 626.3240844607353 MULTI CID FTMS 0 0 0 17396 1365291.625 0.1399868373833692 -4 0.352203369140625 3 Unmodified _KQMEQISQFL_ ENSG00000144834|ENST00000478951|TAGLN3;ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 67.83816525789305 0.0190062514522628 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[PG]Q{I|L}SQ{M(Oxidation (M))|F}{I|L} 11 4 + 82.519 0.0 0.0 6.5982 6.5982 79.912 0.0 0.0 0.0 1.365006360318688 16.575773191777927 1.365006360318688 1.365006360318688 0 1.1861818737241734 1.0969100130080565 1.586696871556164 1.1382104921644451 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[PG]Q{I|L}SQ{M(Oxidation (M))|F}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}[PG]Q{I|L}SQ{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MKQ{I|L}SQ{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[PG][AG]{I|L}SQ{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[PG]Q{I|L}S[AG]{M(Oxidation (M))|F}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}[PG][AG]{I|L}SQ{M(Oxidation (M))|F}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}[PG]Q{I|L}S[AG]{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MK[AG]{I|L}SQ{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MKQ{I|L}S[AG]{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MK[AG]{I|L}S[AG]{M(Oxidation (M))|F}{I|L} 6.5982;6.4891;6.3596;5.8683;5.8683;5.7592;5.7592;5.6269;5.6269;4.8969 -;-;-;-;-;-;-;-;-;- 409 1 0.963 59565.3 1.0 11690 5707 17396 HBL1_DMSO_200M_050219_1,17399 HBL1_DMSO_200M_050219_1,17399,KQMEQISQFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17400 83.449 27.0 2185200.0 25 0 198870.0 + 3890 DALDKIRLI 9 83 528.8239744481274 1055.633395963055 2 528.8243286013603 MULTI CID FTMS 0 0 0 17396 712303.625 0.0049019447098685 18 -1.1110610961914062 4 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 31.26834338654808 0.1333407332142048 3 DA{I|L}DK{I|L}[R{I|L}]{I|L} 9 0 + 72.075 0.0 0.0 6.8277 6.8277 93.658 0.0 0.0 0.0 51.105925060534574 4.436974992327123 4.436974992327123 25.0 0 0.8252574989159953 1.5228787452803376 0.0 0.0 + + DA{I|L}DK{I|L}[R{I|L}]{I|L};D{I|L}ADK{I|L}[R{I|L}]{I|L};{I|L}DADK{I|L}[R{I|L}]{I|L} 6.8277;4.4594;4.1742 +;-;- + 138 + 1 0.963 53255.5 1.0 11691 5707 17396 HBL1_DMSO_200M_050219_1,17400 HBL1_DMSO_200M_050219_1,17400,DALDKIRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17401 83.454 241.0 687120.0 25 0 57678.0 + 44423 YMIAHITGL 9 157 509.7732701153108 1017.5319872974216 2 509.7736083865166 MULTI CID FTMS 0 0 0 17396 650661.9375 0.5899591256905417 -1 0.0497589111328125 5 Unmodified _YMIAHITGL_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 89.42679046578446 0.015225546354407 3 YM{I|L}AH{I|L}TG{I|L} 9 0 + 81.013 0.0 0.0 7.9617 7.9617 87.354 0.0 0.0 0.0 28.366545237210502 10.4972646727866 10.4972646727866 3.80545829404673 0 1.6407209767379805 1.6989700043360187 1.0994850021680094 0.0 + + YM{I|L}AH{I|L}TG{I|L};YM{I|L}AH{I|L}AS{I|L};YM{I|L}AH{I|L}GT{I|L};YM{I|L}AH{I|L}TAV;YM{I|L}AH{I|L}ATV;[H{I|L}]AMY{I|L}GT{I|L};[H{I|L}]A{I|L}TGMY{I|L};[H{I|L}]A{I|L}TMGY{I|L};[H{I|L}]AT{I|L}GMY{I|L};[H{I|L}]A{I|L}MYGT{I|L} 7.9617;7.5877;7.4933;6.93;6.556;5.1739;5.1021;4.8452;4.8301;4.8222 +;-;-;-;-;-;-;-;-;- + 2009 + 1 0.963 128166.2 1.0 11692 5707 17396 HBL1_DMSO_200M_050219_1,17401 HBL1_DMSO_200M_050219_1,17401,YMIAHITGL True True YMIAHITGL 83.453624 509.773608386517 22865292.0 17396.0 ENSG00000176890|ENST00000323274|TYMS;;nc|ENSG00000176890|P04818-3|TYMS;;chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;;nc|ENSG00000176890|P04818-2|TYMS;;ENST00000581920.1_1_18:667730-672994:+|nuORF 6.501166820526123 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17402 83.458 236.0 836220.0 25 0 170420.0 -1 0 140 611.3726020607908 610.3653255941907 1 611.3722411990166 MULTI CID FTMS 0 0 0 17396 566880.375 0.0716070290245879 7 -0.3239288330078125 6 3 {I|L}VAV 4 -1 35.288 0.0 0.0 5.7814 0.0 0.0 0.0 225.0881746881469 225.0881746881469 6.844516076694198 0.0 0.0 0.0 0 0.5356668758921829 0.8239087409443188 0.0 0.0 {I|L}VAV 5.7814 - 199 + 1 0.963 148204.2 1.0 11693 5707 17396 HBL1_DMSO_200M_050219_1,17402 HBL1_DMSO_200M_050219_1,17402, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17403 83.463 243.0 337810.0 25 0 29118.0 -1 LLCYIWKQA 9 121 597.8223211215417 1193.6300893098833 2 598.3239623904228 MULTI CID FTMS 0 0 0 17396 526548.25 0.8670809693373346 -2 0.1735992431640625 7 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))YIWKQA_ ENST00000476529.5_1_10:910113-910176:-|nuORF 19.438996006549623 0.310492472477042 3 {I|L}{I|L}C(Carbamidomethyl (C))Y{I|L}DK[RN] 9 -1 + 41.149 0.0 0.0 3.4473 3.4473 79.86 0.0 0.0 0.0 15.933624391710566 7.147642715192504 7.147642715192504 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}C(Carbamidomethyl (C))Y{I|L}DK[RN];{I|L}{I|L}[CG]Y{I|L}DK[RN];{I|L}{I|L}C(Carbamidomethyl (C)){[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}K[RN];{I|L}{I|L}[HV]TEWPS{I|L};{I|L}{I|L}[HV]TEWPTV;[KP]{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}K[RN];{[TV]|[{I|L}S]}WY{I|L}DK[RN];{I|L}{I|L}{M(Oxidation (M))|F}[RD]{[WT]|[RM]}M{I|L};[YV]{[WT]|[RM]}{I|L}DK[RN];{I|L}{I|L}[CG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}K[RN] 3.4473;2.6759;2.2762;2.1125;2.0499;1.683;1.6539;1.5532;1.5206;1.5047 -;-;-;-;-;-;-;-;-;- 695 1 0.963 66391.2 1.0 11694 5707 17396 HBL1_DMSO_200M_050219_1,17403 HBL1_DMSO_200M_050219_1,17403,LLCYIWKQA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17404 83.468 296.0 351240.0 25 0 30406.0 -1 0 63 1094.074877917767 0 1094.074877917767 PEAK CID FTMS 0 0 0 -1 0 8 3 YS{I|L}V 4 -1 14.412 0.0 0.0 0.65927 0.0 0.0 1374.7569813220591 346.1047457330688 1720.861727055128 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YS{I|L}V 0.65927 - 239 + 1 0.963 70980.6 1.0 11695 5707 17396 HBL1_DMSO_200M_050219_1,17404 HBL1_DMSO_200M_050219_1,17404, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17405 83.475 387.0 334860.0 25 0 46230.0 + 39828 VEVVELKRPGR 11 109 427.9259532253952 1280.7560302763857 3 427.9253112673759 MULTI CID FTMS 0 0 0 17396 260423.25 0.2618846152564966 6 -0.277740478515625 9 Unmodified _VEVVELKRPGR_ REV__ENSG00000173482|ENST00000580170|PTPRM;REV__nc|ENSG00000173482|P28827|PTPRM 5.296884461304476 0.8501568894076437 3 {NN|[MP]|[D{I|L}]|[EV]}V 3 -1 13.789 0.0 0.0 1.0767 0.0 0.0 0.0 950.5512932981233 950.5512932981233 3.789331123033243 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}V 1.0767 + + 50 1 0.963 108777.7 1.0 11696 5707 17396 HBL1_DMSO_200M_050219_1,17405 HBL1_DMSO_200M_050219_1,17405,VEVVELKRPGR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17406 83.481 330.0 277850.0 25 0 77189.0 -1 0 65 1076.532519519329 0 1076.532519519329 PEAK CID FTMS 0 0 0 -1 0 10 3 A{I|L}DM 4 -1 14.157 0.0 0.0 0.65813 0.0 0.0 1470.733726927527 247.1205080621704 1717.8542349896973 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}DM 0.65813 - 55 + 1 0.963 64953.3 1.0 11697 5707 17396 HBL1_DMSO_200M_050219_1,17406 HBL1_DMSO_200M_050219_1,17406, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17407 83.489 437.0 492650.0 25 0 48880.0 21177 LPCRRTLWL 9 161 386.5596801156156 1156.657210947047 3 386.5598022341728 MULTI CID FTMS 0 0 0 17396 180900.890625 0.1733536782134597 -12 0.9673385620117188 11 Unmodified _LPCRRTLWL_ ENST00000368457.2_1_1:154934129-154934222:-|nuORF 14.40537977576856 0.4467465336100671 3 [{I|L}A]H[NP]KVSVP 10 9 54.632 0.0 0.0 4.7232 0.0 0.0 0.0 111.06106447597897 111.06106447597897 24.21950208089315 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 1.6549471895720984 [{I|L}A]H[NP]KVSVP 4.7232 - 1216 1 0.963 179337.6 1.0 11698 5707 17396 HBL1_DMSO_200M_050219_1,17407 HBL1_DMSO_200M_050219_1,17407,LPCRRTLWL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17408 83.497 445.0 257950.0 25 0 39322.0 + -1 IAMYCDLA 8 142 319.4776221560376 0 319.4770995974541 PEAK CID FTMS 0 0 0 17396 187178.8125 0.7281455035961603 7 -0.3239288330078125 12 Carbamidomethyl (C) _IAMYC(Carbamidomethyl (C))DLA_ REV__OR52R1|p.V127M|1|0.35|ENSG00000279270|chr11:4804002-4804002|C/T|missense_variant 7.289230182591677 0.5720337190865908 3 A 1 -1 6.9897 0.0 0.0 1.0974 0.0 0.0 480.8139193835611 82.06703363590077 562.8809530194619 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.0974 + + 9 + 1 0.963 96159.2 1.0 11699 5707 17396 HBL1_DMSO_200M_050219_1,17408 HBL1_DMSO_200M_050219_1,17408,IAMYCDLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17409 83.505 427.0 478460.0 25 0 43265.0 + 4851 DGAFGIRI 8 144 424.735211955001 847.455870976802 2 424.7349731326103 MULTI CID FTMS 0 0 0 17396 160146.65625 0.3308477699201657 -4 0.352203369140625 13 Unmodified _DGAFGIRI_ ENSG00000108039|ENST00000502935|XPNPEP1;nc|ENSG00000108039|Q9NQW7-2|XPNPEP1;nc|ENSG00000108039|Q9NQW7-4|XPNPEP1;nc|ENSG00000108039|Q9NQW7|XPNPEP1 42.09456458481378 0.1992492688217789 3 [DG]A{M(Oxidation (M))|F}{I|L}GR{I|L} 8 2 + 64.869 0.0 0.0 7.6546 7.6546 83.152 0.0 0.0 0.0 20.969100130080555 1.6840443038938986 1.6840443038938986 1.6840443038938986 0 1.0 1.3979400086720375 0.0 0.7302046884880937 [DG]A{M(Oxidation (M))|F}{I|L}GR{I|L};[DG]A{M(Oxidation (M))|F}{I|L}G{I|L}R;[DG]A{M(Oxidation (M))|F}G{I|L}R{I|L};[DG]A{I|L}{M(Oxidation (M))|F}GR{I|L};[DG]A{M(Oxidation (M))|F}G{I|L}{I|L}R;[DG]A{I|L}{M(Oxidation (M))|F}G{I|L}R;[DG]{I|L}A{M(Oxidation (M))|F}GR{I|L};[DG]{I|L}A{M(Oxidation (M))|F}G{I|L}R;[DG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}R{I|L};[DG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}R 7.6546;7.4559;7.2994;7.2994;7.1006;7.1006;5.6971;5.4984;3.6464;3.4477 -;-;+;-;-;-;-;-;-;- + 208 + 1 0.963 160392.8 1.0 11700 5707 17396 HBL1_DMSO_200M_050219_1,17409 HBL1_DMSO_200M_050219_1,17409,DGAFGIRI False True DGAFGIRI 83.505453 424.73497313261 3038164.75 17396.0 nc|ENSG00000108039|Q9NQW7-4|XPNPEP1;;nc|ENSG00000108039|Q9NQW7|XPNPEP1;;nc|ENSG00000108039|Q9NQW7-2|XPNPEP1;;ENSG00000108039|ENST00000502935|XPNPEP1 4.082240184148152 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17411 83.51 0.24 234330000.0 25 0 42952000.0 + 4642 DAYVLPKLY 9 69 541.2999781941046 1080.585403455009 2 541.3008300662041 MULTI CID FTMS 0 0 0 17410 246609168.0 0.8711554576418561 -1 0.0683517456054687 1 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 37.97399986684836 0.0865783450051559 3 {[DA]|[EG]}YV 4 5 34.781 0.0 0.0 3.2188 0.0 0.0 0.0 629.3655297579966 629.3655297579966 7.82628671710107 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YV 3.2188 + + 74 1 0.936 49234.3 1.0 11701 5708 17410 HBL1_DMSO_200M_050219_1,17411 HBL1_DMSO_200M_050219_1,17411,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17412 83.511 2.3 28385000.0 25 0 5443400.0 + 40373 VIAEILRGV 9 60 485.3082180073324 968.6018830814648 2 485.3083679080009 MULTI CID FTMS 0 0 0 17410 30233790.0 1.0 0 0.0 2 Unmodified _VIAEILRGV_ ENSG00000101361|ENST00000329276|NOP56 34.40172386719151 0.1061884637610825 3 V{I|L}AE{I|L}{I|L} 6 3 71.019 0.0 0.0 7.3321 0.0 0.0 0.0 327.1787203424438 327.1787203424438 53.571231544599485 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + V{I|L}AE{I|L}{I|L} 7.3321 + + 59 + 1 0.936 56817.3 1.0 11702 5708 17410 HBL1_DMSO_200M_050219_1,17412 HBL1_DMSO_200M_050219_1,17412,VIAEILRGV True True VIAEILRGV 83.510686 485.308367908001 182714128.0 17410.0 ENSG00000101361|ENST00000329276|NOP56 3.82422145207723 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17413 83.512 2.9 6097900.0 25 0 585410.0 + 24295 MAYPDLNEI 9 51 533.250190119819 1064.4858273064378 2 533.2505981326103 MULTI CID FTMS 0 0 0 17410 24390914.0 1.0 0 0.0 3 Unmodified _MAYPDLNEI_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 5.230669730166228 0.7320841359114558 3 {[DS]|[MA]|[CV]|TT}Y 3 6 17.033 0.0 0.0 1.6001 0.0 0.0 0.0 696.3213735313003 696.3213735313003 4.55909798898422 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 + {[DS]|[MA]|[CV]|TT}Y 1.6001 + + 15 1 0.936 20178.0 1.0 11703 5708 17410 HBL1_DMSO_200M_050219_1,17413 HBL1_DMSO_200M_050219_1,17413,MAYPDLNEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17414 83.513 4.5 3985200.0 25 0 377700.0 44688 YPFKPPMI 8 47 496.7673432328521 991.5201335325042 2 496.7675353884697 MULTI CID FTMS 0 0 0 17410 12457538.0 1.0 0 0.0 4 Unmodified _YPFKPPMI_ ENSG00000156587|ENST00000287156|UBE2L6 2.577480529830294 0.808687252328423 3 M 1 7 0.088644 0.0 0.0 0.0089402 0.0 0.0 730.6451468155105 126.80742822818594 857.4525750436965 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 0.0089402 + + 2 + 1 0.936 20630.1 1.0 11704 5708 17410 HBL1_DMSO_200M_050219_1,17414 HBL1_DMSO_200M_050219_1,17414,YPFKPPMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17415 83.514 12.0 1107500.0 25 0 142290.0 + 29332 QIQAQKKDN 9 36 536.7894635718493 1071.5643742104985 2 536.7897216677666 MULTI CID FTMS 0 0 0 17410 4264008.0 0.7374984390452803 -1 0.0683517456054687 5 Unmodified _QIQAQKKDN_ REV__ENSG00000139618|ENST00000380152|BRCA2 1.844237919475145 0.850302753031785 3 {I|L} 1 -1 11.259 0.0 0.0 1.0507 0.0 0.0 940.4690505794424 0.0 940.4690505794424 0.0 7.764209843288903 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0507 + + 4 + 1 0.936 16657.4 1.0 11705 5708 17410 HBL1_DMSO_200M_050219_1,17415 HBL1_DMSO_200M_050219_1,17415,QIQAQKKDN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17416 83.515 21.0 744970.0 25 0 63278.0 40296 VGVPLRYR 8 47 480.2923743951735 958.570195857147 2 480.2922546267509 MULTI CID FTMS 0 0 0 17410 3619392.0 0.4466523031077044 3 -0.1371917724609375 6 Unmodified _VGVPLRYR_ ENSG00000103047|ENST00000261778|TANGO6;ENST00000561566.1_1_16:68894085-68896991:+|nuORF;ENST00000564180.1_1_16:68877520-68901131:+|nuORF 0.7936320650641473 0.8195151834710337 3 G 1 7 0.27759 0.0 0.0 0.028958 0.0 0.0 830.4745823090987 68.05155359439686 898.5261359034955 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 0.028958 + + 2 + 1 0.936 18724.2 1.0 11706 5708 17410 HBL1_DMSO_200M_050219_1,17416 HBL1_DMSO_200M_050219_1,17416,VGVPLRYR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17417 83.517 16.0 933940.0 25 0 99863.0 + 9902 FPFYGKPMRI 10 43 419.2266611861339 1254.6581541586015 3 419.2267944216728 MULTI CID FTMS 0 0 0 17410 3415375.0 0.2805809515735125 16 -0.9822845458984376 7 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 13.90604991867851 0.6142120002215601 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}Y 4 6 36.995 0.0 0.0 2.9486 0.0 0.0 0.0 697.3841036432249 697.3841036432249 31.51023442440469 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}Y 2.9486 + + 10 + 1 0.936 21744.8 1.0 11707 5708 17410 HBL1_DMSO_200M_050219_1,17417 HBL1_DMSO_200M_050219_1,17417,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17418 83.518 36.0 1331300.0 25 0 111900.0 + 22185 LPQEIIIKV 9 76 526.8395939279618 1051.6646349227235 2 526.8403808474541 MULTI CID FTMS 0 0 0 17410 1878761.875 0.6998739955381569 -1 0.0683517456054687 8 Unmodified _LPQEIIIKV_ ENSG00000167384|ENST00000592529|ZNF180;ENST00000585514.5_1_19:44983681-45004353:-|nuORF;nc|ENSG00000167384|Q9UJW8-4|ZNF180;nc|ENSG00000167384|Q9UJW8|ZNF180 41.95555342248728 0.0647214845423414 3 {I|L}P[Q{I|L}]V{I|L}{M(Oxidation (M))|F}{I|L} 8 4 41.419 0.0 0.0 3.9384 0.0 0.0 0.0 125.07256494693594 125.07256494693594 5.528419686577806 0.0 0.0 0.0 0 0.3494850021680094 1.154901959985743 0.0 0.0 {I|L}P[Q{I|L}]V{I|L}{M(Oxidation (M))|F}{I|L} 3.9384 - 132 + 1 0.936 44641.0 1.0 11708 5708 17410 HBL1_DMSO_200M_050219_1,17418 HBL1_DMSO_200M_050219_1,17418,LPQEIIIKV True True LPQEIIIKV 83.517757 526.840380847454 12478256.0 17410.0 ENSG00000167384|ENST00000592529|ZNF180;;nc|ENSG00000167384|Q9UJW8-4|ZNF180;;nc|ENSG00000167384|Q9UJW8|ZNF180;;ENST00000585514.5_1_19:44983681-45004353:-|nuORF 3.911333560943604 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17419 83.519 48.0 3133500.0 25 0 550580.0 + 34126 SLLSHVEQL 9 133 513.2845795721952 1024.5546062111905 2 513.2848388552666 MULTI CID FTMS 0 0 0 17410 1575609.875 0.949440472523848 -1 0.0683517456054687 9 Unmodified _SLLSHVEQL_ ENSG00000116670|ENST00000376692|MAD2L2;ENST00000376664.10_1_1:11735929-11741152:-|nuORF 103.35351024395868 0.0092202910191236 3 {[TV]|[{I|L}S]}HVTVEQ{I|L} 9 3 + 96.595 0.0 0.0 9.428 9.428 84.214 0.0 0.0 0.0 20.737862141609185 49.940301182390726 20.737862141609185 0.8756200458354186 0 1.16944517631652 2.0 1.329689690656103 0.0 {[TV]|[{I|L}S]}HVTVEQ{I|L};{[TV]|[{I|L}S]}HVEQ{I|L}S{I|L};{[TV]|[{I|L}S]}HD{I|L}Q{I|L}S{I|L};{[TV]|[{I|L}S]}HVTVE[AG]{I|L};{[TV]|[{I|L}S]}HV{I|L}SEQ{I|L};{[TV]|[{I|L}S]}HVEVTQ{I|L};{[TV]|[{I|L}S]}H{I|L}SVEQ{I|L};{[TV]|[{I|L}S]}H{I|L}DQ{I|L}S{I|L};{[TV]|[{I|L}S]}HDQ{I|L}{I|L}S{I|L};{[TV]|[{I|L}S]}HVE[AG]{I|L}S{I|L} 9.428;9.3426;8.7076;8.5293;8.5254;8.4189;8.1109;8.0254;7.9979;7.8639 -;-;-;-;-;-;-;-;-;- 5344 1 0.936 117454.0 1.0 11709 5708 17410 HBL1_DMSO_200M_050219_1,17419 HBL1_DMSO_200M_050219_1,17419,SLLSHVEQL True True SLLSHVEQL 83.519055 513.284838855267 16577302.0 17410.0 ENST00000376664.10_1_1:11735929-11741152:-|nuORF;;ENSG00000116670|ENST00000376692|MAD2L2 6.22948424021403 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17420 83.52 56.0 1520200.0 25 0 126470.0 + + 43327 RQIDQFLVVA 10 76 594.8416750353209 1187.6687971374415 2 594.8423950076103 MULTI CID FTMS 0 0 0 17410 1597227.25 0.9413085952319808 -1 0.0683517456054687 10 Unmodified _WLQVGGVFIAV_ nc|ENSG00000057935|Q9BTC8-2|MTA3;ENST00000531261.1_1_11:62365080-62365595:-|nuORF;ENSG00000149480|ENST00000278823|MTA2;nc|ENSG00000149480|O94776-2|MTA2;ENSG00000057935|ENST00000405094|MTA3 13.042465956692816 0.7638483625850725 3 [W{I|L}]{[NV]|[RG]}Q{M(Oxidation (M))|F}{I|L}VG{I|L} 10 -1 + 55.245 0.0 0.0 4.6515 4.6515 80.864 0.0 0.0 0.0 6.989700043360188 7.849008746626403 6.989700043360188 6.989700043360188 0 0.5579021467263782 2.0 0.0 0.0 [W{I|L}]{[NV]|[RG]}Q{M(Oxidation (M))|F}{I|L}VG{I|L};VV[WQ]Q{M(Oxidation (M))|F}{I|L}VG{I|L};[W{I|L}]{[NV]|[RG]}Q{M(Oxidation (M))|F}V{I|L}G{I|L};[W{I|L}]{[NV]|[RG]}[AG]{M(Oxidation (M))|F}{I|L}VG{I|L};VV[WQ]Q{M(Oxidation (M))|F}V{I|L}G{I|L};VV[WQ][AG]{M(Oxidation (M))|F}{I|L}VG{I|L};[W{I|L}]{[NV]|[RG]}[AG]{M(Oxidation (M))|F}V{I|L}G{I|L};[{I|L}V]{[WN]|[YH]}Q{M(Oxidation (M))|F}{I|L}VG{I|L};VV[WQ][AG]{M(Oxidation (M))|F}V{I|L}G{I|L};[{I|L}V]{[WN]|[YH]}Q{M(Oxidation (M))|F}V{I|L}G{I|L} 4.6515;4.063;3.9963;3.8799;3.4078;3.2914;3.2247;3.0679;2.6362;2.4127 -;-;-;-;-;-;-;-;-;- 98 1 0.936 73161.1 1.0 11710 5708 17410 HBL1_DMSO_200M_050219_1,17420 HBL1_DMSO_200M_050219_1,17420,WLQVGGVFIAV False False RQIDQFLVVA 83.52048 594.84239500761 15420000.0 17410.0 nc|ENSG00000057935|Q9BTC8-2|MTA3;;ENST00000531261.1_1_11:62365080-62365595:-|nuORF;;ENSG00000149480|ENST00000278823|MTA2;;nc|ENSG00000149480|O94776-2|MTA2;;ENSG00000057935|ENST00000405094|MTA3 5.919352213541667 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17421 83.522 84.0 2095800.0 25 0 332310.0 18629 LAFMARCL 8 127 462.7438414389623 923.4731299447244 2 462.7441589236259 MULTI CID FTMS 0 0 0 17410 1328838.625 0.279388706742054 22 -1.5799331665039062 11 Unmodified _LAFMARCL_ ENSG00000155034|ENST00000382368|FBXL18;nc|ENSG00000155034|Q96ME1-1|FBXL18;nc|ENSG00000155034|Q96ME1-2|FBXL18;nc|ENSG00000155034|Q96ME1-5|FBXL18 20.871210003555333 0.6025813472596342 3 [{I|L}A]P{I|L} 4 5 40.445 0.0 0.0 4.3797 0.0 0.0 0.0 526.1903170221311 526.1903170221311 25.708253071758875 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.3797 - 529 + 1 0.936 136893.8 1.0 11711 5708 17410 HBL1_DMSO_200M_050219_1,17421 HBL1_DMSO_200M_050219_1,17421,LAFMARCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17422 83.526 212.0 784380.0 25 0 90018.0 -1 TPLLCACVC 9 170 490.22283398063416 978.4311150280683 2 490.2234069705009 MULTI CID FTMS 0 0 0 17410 972600.4375 1.0 0 0.0 12 Carbamidomethyl (C) _TPLLCAC(Carbamidomethyl (C))VC_ ENST00000360472.8_1_1:160183272-160183497:+|nuORF 30.22481116460888 0.1466181017706357 3 [TP]{I|L} 3 -1 38.433 0.0 0.0 3.9281 0.0 0.0 0.0 664.2223192119152 664.2223192119152 20.9592235319728 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.6694451763165201 0.0 [TP]{I|L} 3.9281 + + 557 1 0.936 123855.0 1.0 11712 5708 17410 HBL1_DMSO_200M_050219_1,17422 HBL1_DMSO_200M_050219_1,17422,TPLLCACVC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17423 83.531 229.0 2132600.0 25 0 393550.0 + 23071 LSLMSCTI 8 163 470.7263124699047 939.4380720066094 2 470.7262145876884 MULTI CID FTMS 0 0 0 17410 898498.8125 0.1845437783195998 -14 1.0826950073242188 13 Carbamidomethyl (C),Oxidation (M) _LSLM(Oxidation (M))SC(Carbamidomethyl (C))TI_ ENST00000304056.8_1_7:32919423-32919537:-|nuORF 53.57557251787612 0.1224291679108181 3 {I|L}AS 3 6 50.534 0.0 0.0 5.3792 0.0 0.0 0.0 665.2641098425568 665.2641098425568 29.231204412112632 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.6861818737241735 0.0 {I|L}AS 5.3792 - 1311 + 1 0.936 372925.9 1.0 11713 5708 17410 HBL1_DMSO_200M_050219_1,17423 HBL1_DMSO_200M_050219_1,17423,LSLMSCTI True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17424 83.535 210.0 1219300.0 25 0 212320.0 + 9367 FIPPDGNFRL 10 140 588.3140312141247 1174.6135094950494 2 588.3125488162041 MULTI CID FTMS 0 0 0 17410 842538.9375 0.3105611100728835 -11 0.86505126953125 14 Unmodified _FIPPDGNFRL_ ENSG00000070718|ENST00000396926|AP3M2;ENSG00000185009|ENST00000355264|AP3M1;ENST00000480373.1_1_10:75888732-75889691:-|nuORF;nc|ENSG00000070718|P53677-2|AP3M2 45.69961567697781 0.105390671673896 3 {[MG]|[TS]}{I|L}QAS[DV]{I|L}{[QN]|[E{I|L}]|[KN]} 11 9 + 42.074 0.0 0.0 3.5819 3.5819 73.859 0.0 0.0 0.0 5.4146823552614265 5.862435673934272 5.4146823552614265 3.4418767740052374 0 0.6694451763165201 0.0 1.0114393726401687 0.3494850021680094 {[MG]|[TS]}{I|L}QAS[DV]{I|L}{[QN]|[E{I|L}]|[KN]};{[MG]|[TS]}{I|L}QA{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P{[QN]|[E{I|L}]|[KN]};{[MG]|[TS]}{I|L}V[KS]DSP{[QN]|[E{I|L}]|[KN]};{[MG]|[TS]}{I|L}GAAS[DV]{I|L}{[QN]|[E{I|L}]|[KN]};[{I|L}V]NCA{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P{[QN]|[E{I|L}]|[KN]};[VG]{I|L}C(Carbamidomethyl (C))[YK]PP{[QN]|[E{I|L}]|[KN]};[VG]{I|L}C(Carbamidomethyl (C))A{[CT]|[{M(Oxidation (M))|F}G]}P{I|L}{[QN]|[E{I|L}]|[KN]};[VG]{I|L}C(Carbamidomethyl (C))A{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P{[QN]|[E{I|L}]|[KN]};{[MG]|[TS]}{I|L}QA{[CT]|[{M(Oxidation (M))|F}G]}P{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}{[CT]|[{M(Oxidation (M))|F}G]}AQ[WP] 3.5819;3.2889;3.2395;3.1278;3.1209;3.1078;3.097;3.0763;3.012;2.9853 -;-;-;-;-;-;-;-;-;- 2826 1 0.936 194574.5 1.0 11714 5708 17410 HBL1_DMSO_200M_050219_1,17424 HBL1_DMSO_200M_050219_1,17424,FIPPDGNFRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17425 83.539 219.0 613590.0 25 0 31095.0 -1 0 143 881.907832465658 1761.801111998116 2 881.9091064333916 MULTI CID FTMS 0 0 0 17410 802868.75 0.2087126156011408 8 -0.3445053100585937 15 3 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQENA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 131.48 0.0 0.0 7.4627 7.4627 63.353 0.0 0.0 0.0 6.465912507003608 16.690067809585756 6.465912507003608 0.0 0 1.079689690656103 1.3979400086720375 2.673877368056628 1.392159058960253 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQENA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQENA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AEQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AEQNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQDQA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQDQA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]AQENA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]AQENA{M(Oxidation (M))|F}YKV{I|L} 7.4627;7.4627;7.4174;7.4174;7.2918;7.2918;7.121;7.121;7.0957;7.0957 -;-;-;-;-;-;-;-;-;- 36392 1 0.936 95046.7 1.0 11715 5708 17410 HBL1_DMSO_200M_050219_1,17425 HBL1_DMSO_200M_050219_1,17425, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17426 83.543 234.0 741380.0 25 0 126990.0 + 21115 LPANVPII 8 99 836.5242479821387 835.5169715155387 1 836.5255004763603 MULTI CID FTMS 0 0 0 17410 668773.0625 1.0 0 0.0 16 Unmodified _LPANVPII_ ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-17|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1 67.03532852164291 0.116292309877964 3 [{I|L}P]GQVP{I|L}{I|L} 8 2 + 60.276 0.0 0.0 7.2142 7.2142 82.267 0.0 0.0 0.0 18.864907251724823 13.93553046518285 13.93553046518285 1.7609125905568137 0 0.7302046884880937 1.5228787452803376 0.0 0.6421590589602533 [{I|L}P]GQVP{I|L}{I|L};[{I|L}P]ANVP{I|L}{I|L};[{I|L}P]GN{I|L}P{I|L}{I|L};[{I|L}P]G{I|L}NP{I|L}{I|L};[{I|L}P]AVNP{I|L}{I|L};[{I|L}P]GPAV{I|L}AV;[{I|L}P]G{I|L}PG{I|L}AV;[{I|L}P]GPA{I|L}VAV;[{I|L}P]GP{I|L}G{I|L}AV;[{I|L}P]G{I|L}PAVAV 7.2142;7.0035;6.896;6.2738;6.0631;5.5463;5.4593;5.4303;5.3609;5.3434 -;+;-;-;-;-;-;-;-;- + 2558 1 0.936 120322.5 1.0 11716 5708 17410 HBL1_DMSO_200M_050219_1,17426 HBL1_DMSO_200M_050219_1,17426,LPANVPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17427 83.545 97.0 779540.0 25 0 136530.0 + 16954 KIMTISTLV 9 101 503.3050011662804 1004.5954493993607 2 503.3051330447197 MULTI CID FTMS 0 0 0 17410 414312.15625 0.4771867954263454 -3 0.2419509887695312 17 Unmodified _KIMTISTLV_ ENST00000371621.4_1_20:49177909-49181565:+|nuORF 24.020572477871973 0.2255576514309169 3 [{I|L}T]MK{I|L}{[MG]|[TS]}{I|L}V 9 2 + 44.565 0.0 0.0 4.4361 4.4361 84.849 0.0 0.0 0.0 14.717262228329565 17.12505150933842 14.717262228329565 15.752574989159951 0 0.7742275032520141 1.3979400086720375 1.0501648626366045 0.0 [{I|L}T]MK{I|L}{[MG]|[TS]}{I|L}V;[{I|L}T]MK{I|L}[VS][{I|L}T] 4.4361;2.8681 -;- 319 1 0.936 61027.5 1.0 11717 5708 17410 HBL1_DMSO_200M_050219_1,17427 HBL1_DMSO_200M_050219_1,17427,KIMTISTLV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17428 83.551 291.0 494850.0 25 0 102440.0 23809 LVDVRGRRPL 10 128 590.866570803611 1179.718588674022 2 590.8661987185478 MULTI CID FTMS 0 0 0 17410 384893.65625 0.1354016542210772 -3 0.2419509887695312 18 Unmodified _LVDVRGRRPL_ DLG5|p.R1690Sfs*26|1|0.31|ENSG00000151208|chr10:77805761-77805762|-/A|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;ENST00000475613.6_1_10:79580836-79628876:-|nuORF;nc|ENSG00000151208|Q8TDM6-3|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5 1.9063754702782607 0.7178183895776981 3 {I|L} 1 9 9.8329 0.0 0.0 0.83349 0.0 0.0 1048.6237228066375 0.0 1048.6237228066375 0.0 0.4357508785945008 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.83349 + + 60 + 1 0.936 110847.9 1.0 11718 5708 17410 HBL1_DMSO_200M_050219_1,17428 HBL1_DMSO_200M_050219_1,17428,LVDVRGRRPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17429 83.556 284.0 191300.0 25 0 33196.0 -1 0 83 870.8597900271416 0 870.8597900271416 PEAK CID FTMS 0 0 0 -1 0 19 3 {I|L}V{I|L}SSP 6 -1 25.553 0.0 0.0 1.4688 0.0 0.0 959.2272572009643 181.09926782779533 1140.3265250287598 0.0 0.0 0.0 0.0 0 0.0 0.0 1.924742501084005 0.0 {I|L}V{I|L}SSP 1.4688 - 1340 + 1 0.936 40624.4 1.0 11719 5708 17410 HBL1_DMSO_200M_050219_1,17429 HBL1_DMSO_200M_050219_1,17429, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17430 83.563 391.0 547960.0 25 0 92517.0 + 30947 RKQLLHGSKP 10 143 388.5714107292959 1162.6924027880875 3 388.5719177126884 MULTI CID FTMS 0 0 0 17410 346625.34375 0.2614911477837492 -7 0.5821990966796875 20 Unmodified _RKQLLHGSKP_ REV__ENST00000284273.5_1_11:122680793-122681132:+|nuORF 1.4819007175156935 0.719781833666733 3 {I|L} 1 -1 9.7539 0.0 0.0 0.83891 0.0 0.0 1031.597247003711 0.0 1031.597247003711 0.0 0.6052184636238778 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.83891 + + 31 + 1 0.936 189717.2 1.0 11720 5708 17410 HBL1_DMSO_200M_050219_1,17430 HBL1_DMSO_200M_050219_1,17430,RKQLLHGSKP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17432 83.567 18.0 2890300.0 25 0 319950.0 + 41464 VPLPNVPSI 9 81 468.2817208672013 934.5488888012028 2 468.2818481326103 MULTI CID FTMS 0 0 0 17431 2597132.75 0.643399938462697 -5 0.3516845703125 1 Unmodified _VPLPNVPSI_ ENSG00000101421|ENST00000217402|CHMP4B;nc|ENSG00000258469|P59074|CHMP4BP1 39.957323273325 0.0756908302845263 3 [NP]VV{I|L}PPS{I|L} 9 5 + 53.579 0.0 0.0 5.7331 5.7331 80.292 0.0 0.0 0.0 6.434526764861879 20.457574905606748 6.434526764861879 3.143265708843046 0 1.1237125054200234 1.0 0.0 0.0 [NP]VV{I|L}PPS{I|L};[NP]V[{I|L}P]VPS{I|L};[VP]NV{I|L}PPS{I|L};[VP]N[{I|L}P]VPS{I|L};[NP]VVTP[VP]{I|L};[NP]V[{I|L}P]S[VP]{I|L};[VP]GGV{I|L}PPS{I|L};[PS][KP]{I|L}PPS{I|L};[VP]{I|L}[NP]VPS{I|L};[VP]NVTP[VP]{I|L} 5.7331;5.3968;5.0446;4.7083;4.5915;4.1383;4.0593;4.0174;3.9604;3.9029 -;-;-;-;-;-;-;-;+;- + 451 1 0.936 45802.7 1.0 11721 5709 17431 HBL1_DMSO_200M_050219_1,17432 HBL1_DMSO_200M_050219_1,17432,VPLPNVPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17433 83.568 63.0 1844100.0 25 0 135140.0 + 10780 FYPPPRITL 9 104 552.3158791596387 1102.617205386077 2 552.3149291872978 MULTI CID FTMS 0 0 0 17431 1002911.375 0.6746458889211405 -14 1.0931472778320312 2 Unmodified _FYPPPRITL_ ENSG00000102221|ENST00000614628|JADE3 13.90604991867851 0.4602628045680013 3 PP[YE] 4 7 19.693 0.0 0.0 1.786 0.0 0.0 598.3809906726651 0.0 598.3809906726651 0.0 4.911356165197844 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 PP[YE] 1.786 - 145 1 0.936 95976.7 1.0 11722 5709 17431 HBL1_DMSO_200M_050219_1,17433 HBL1_DMSO_200M_050219_1,17433,FYPPPRITL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17434 83.57 23.0 2626200.0 25 0 525860.0 + 14117 IAVDRYLAI 9 72 517.3058242851847 1032.597095637169 2 517.3060790896416 MULTI CID FTMS 0 0 0 17431 2443316.0 0.5361856564418336 -5 0.3516845703125 3 Unmodified _IAVDRYLAI_ ENSG00000160683|ENST00000292174|CXCR5;nc|ENSG00000160683|P32302-2|CXCR5 38.61474834105838 0.0830609365873449 3 {I|L}AVD 4 5 64.24 0.0 0.0 6.2212 0.0 0.0 0.0 631.3602388971311 631.3602388971311 38.10348774682318 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.0 + {I|L}AVD 6.2212 + + 48 + 1 0.936 53969.1 1.0 11723 5709 17431 HBL1_DMSO_200M_050219_1,17434 HBL1_DMSO_200M_050219_1,17434,IAVDRYLAI True True IAVDRYLAI 83.569677 517.306079089642 78739240.0 17431.0 nc|ENSG00000160683|P32302-2|CXCR5;;ENSG00000160683|ENST00000292174|CXCR5 4.299922545750936 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17435 83.571 60.0 1117400.0 25 0 213010.0 1476 ALGADISMY 9 63 314.15333966184846 939.4381895857456 3 314.1532165408134 MULTI CID FTMS 0 0 0 17431 1370998.0 0.7674116032271916 5 -0.1981201171875 4 Unmodified _ALGADISMY_ ENSG00000116761|ENST00000370938|CTH;nc|ENSG00000116761|P32929-2|CTH;nc|ENSG00000116761|P32929-3|CTH 18.13498045792455 0.3457906370836843 3 A{I|L}{I|L} 3 6 49.085 0.0 0.0 5.2249 0.0 0.0 0.0 639.2111405926896 639.2111405926896 38.62756757724155 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 A{I|L}{I|L} 5.2249 - 27 + 1 0.936 57822.3 1.0 11724 5709 17431 HBL1_DMSO_200M_050219_1,17435 HBL1_DMSO_200M_050219_1,17435,ALGADISMY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17436 83.575 209.0 779490.0 25 0 68081.0 14544 IHCPFYYQI 9 137 592.2829229020356 1182.551292870871 2 592.2821533083916 MULTI CID FTMS 0 0 0 17431 658285.3125 0.70684551073157 -2 0.1258087158203125 5 Unmodified _IHCPFYYQI_ ENST00000342435.8_1_3:146233506-146233563:-|nuORF 23.1484247019978 0.2366544122328345 3 PTVD{I|L}DPAC(Carbamidomethyl (C)){I|L} 10 9 51.055 0.0 0.0 4.3174 0.0 0.0 83.03791243720859 0.0 83.03791243720859 0.0 37.560348227625866 0.0 0.0 0 1.424742501084005 0.0 0.566901560044258 0.0 PTVD{I|L}DPAC(Carbamidomethyl (C)){I|L} 4.3174 - 1206 1 0.936 123188.1 1.0 11725 5709 17431 HBL1_DMSO_200M_050219_1,17436 HBL1_DMSO_200M_050219_1,17436,IHCPFYYQI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17437 83.579 210.0 1111900.0 25 0 82539.0 + 39587 VCYYTGVDAP 10 194 544.2396328298188 1086.4647127264377 2 544.2401000857353 MULTI CID FTMS 0 0 0 17431 695382.625 1.0 0 0.0 6 Unmodified _VCYYTGVDAP_ REV__chr20:1630306-1649052|45|20.42|0.82|4.63|-|ENST00000344103|SIRPG,SIRPG;REV__ENSG00000089012|ENST00000303415|SIRPG;REV__nc|ENSG00000089012|Q9P1W8-2|SIRPG;REV__nc|ENSG00000089012|Q9P1W8-3|SIRPG;REV__nc|ENSG00000089012|Q9P1W8-4|SIRPG 25.399314129420983 0.3980215340001851 3 MAYPD[YQ]S{I|L} 9 -1 + 70.64 0.0 0.0 6.5018 6.5018 80.763 0.0 0.0 0.0 31.706962271689747 2.04119982655925 2.04119982655925 2.04119982655925 0 0.7302046884880937 1.5228787452803376 0.3494850021680094 0.0 MAYPD[YQ]S{I|L};MAYPD[YQ]TV;MA{I|L}{M(Oxidation (M))|F}D[YQ]S{I|L};MA{I|L}{M(Oxidation (M))|F}D[YQ]TV;MAY{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DC]{I|L};MAY{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[EC]V;MAY{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[W{M(Oxidation (M))|F}];MAY[YT]YY{I|L};MAY{I|L}[YT]YY;MA{I|L}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DC]{I|L} 6.5018;6.3139;5.7774;5.5896;4.594;4.4061;4.3393;4.1351;3.9349;3.8696 -;-;-;-;-;-;-;-;-;- 3725 + 1 0.936 180450.8 1.0 11726 5709 17431 HBL1_DMSO_200M_050219_1,17437 HBL1_DMSO_200M_050219_1,17437,VCYYTGVDAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17438 83.581 77.0 1077200.0 25 0 79547.0 39388 VAILDKEPI 9 106 499.3012116219063 996.5878703106126 2 499.2996093630791 MULTI CID FTMS 0 0 0 17431 581895.25 0.9116030397721208 1 -0.0519485473632812 7 Unmodified _VAILDKEPI_ ENSG00000151276|ENST00000402939|MAGI1;nc|ENSG00000151276|Q96QZ7-3|MAGI1;nc|ENSG00000151276|Q96QZ7-4|MAGI1;nc|ENSG00000151276|Q96QZ7-5|MAGI1;nc|ENSG00000151276|Q96QZ7-6|MAGI1;nc|ENSG00000151276|Q96QZ7-7|MAGI1;nc|ENSG00000151276|Q96QZ7|MAGI1 22.65808497894818 0.2428932432760099 3 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}G{I|L}[EP]{I|L} 9 4 + 48.229 0.0 0.0 4.8394 4.8394 75.314 0.0 0.0 0.0 2.08674701179433 7.944539621753535 2.08674701179433 2.08674701179433 0 1.1861818737241734 1.3979400086720375 0.25 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}G{I|L}[EP]{I|L};{[VA]|[{I|L}G]}D{I|L}K{I|L}[EP]{I|L};{[VA]|[{I|L}G]}EKV{I|L}[EP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{I|L}K{I|L}[EP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}KAV{I|L}[EP]{I|L};{[VA]|[{I|L}G]}EVK{I|L}[EP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}AKV{I|L}[EP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}AVK{I|L}[EP]{I|L};{[VA]|[{I|L}G]}{I|L}SVG{I|L}[EP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}VAK{I|L}[EP]{I|L} 4.8394;4.63;4.5787;4.5046;4.486;4.4533;4.4533;4.3279;4.2539;4.2026 -;-;-;-;-;-;-;-;-;- 1885 1 0.936 65190.1 1.0 11727 5709 17431 HBL1_DMSO_200M_050219_1,17438 HBL1_DMSO_200M_050219_1,17438,VAILDKEPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17439 83.585 221.0 439910.0 25 0 23012.0 + 19091 LDRWYCASW 9 123 600.2671530547594 1198.5197531763188 2 600.2683593630791 MULTI CID FTMS 0 0 0 17431 554525.3125 0.6542548516033084 -4 0.299407958984375 8 Unmodified _LDRWYCASW_ REV__ENSG00000103978|ENST00000389834|TMEM87A;REV__ENST00000562946.5_1_15:42519884-42565596:-|nuORF;REV__ENST00000569075.5_1_15:42525398-42565582:-|nuORF;REV__nc|ENSG00000103978|Q8NBN3-3|TMEM87A 20.580933911654288 0.2795815587326093 3 {I|L}[WM]AW[YG]C(Carbamidomethyl (C)){I|L} 9 -1 + 23.918 0.0 0.0 1.9956 1.9956 66.425 0.0 0.0 0.0 4.282118526775147 5.060994811992053 4.282118526775147 0.5237875363565792 0 0.5 0.0 0.0 0.0 {I|L}[WM]AW[YG]C(Carbamidomethyl (C)){I|L};{I|L}[EC]RW[YG]C(Carbamidomethyl (C)){I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[NG]AW[YG]C(Carbamidomethyl (C)){I|L};[YQ]A[DP][YV]CQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}C[DP][YV]AC(Carbamidomethyl (C)){I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}C[DP]{I|L}[YG]C(Carbamidomethyl (C)){I|L};[YQ]A[DP][YV]C{I|L}Q;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}C{I|L}[DP][YG]C(Carbamidomethyl (C)){I|L};[YQ]A[DP][YV]AC(Carbamidomethyl (C)){I|L};[YQ]A[DP]{I|L}[YG]C(Carbamidomethyl (C)){I|L} 1.9956;1.9519;1.1847;1.1491;1.0805;1;0.99137;0.74887;0.70587;0.62544 -;-;-;-;-;-;-;-;-;- 673 + 1 0.936 71771.4 1.0 11728 5709 17431 HBL1_DMSO_200M_050219_1,17439 HBL1_DMSO_200M_050219_1,17439,LDRWYCASW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17440 83.589 234.0 514330.0 25 0 64424.0 -1 0 103 739.3627475096896 2215.0664131292688 3 739.6997558474541 MULTI CID FTMS 0 0 0 17431 557639.125 1.0 0 0.0 9 3 {[DA]|[EG]}TAA{I|L}Y{[QN]|[E{I|L}]|[KN]}[QA]YY{I|L} 14 -1 35.244 0.0 0.0 1.5911 0.0 0.0 0.0 626.2772575237558 626.2772575237558 7.483966704706475 0.0 0.0 0.0 0 0.0 1.0 1.385151878060192 0.0 {[DA]|[EG]}TAA{I|L}Y{[QN]|[E{I|L}]|[KN]}[QA]YY{I|L} 1.5911 - 8040 1 0.936 95042.1 1.0 11729 5709 17431 HBL1_DMSO_200M_050219_1,17440 HBL1_DMSO_200M_050219_1,17440, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17441 83.594 258.0 244590.0 25 0 39886.0 -1 0 90 1091.047045886517 0 1091.047045886517 PEAK CID FTMS 0 0 0 -1 0 10 3 WVY{I|L}T 5 -1 27.467 0.0 0.0 1.2599 0.0 0.0 1259.6315540759654 255.06192957095945 1514.6934836469247 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 WVY{I|L}T 1.2599 - 1117 + 1 0.936 47737.5 1.0 11730 5709 17431 HBL1_DMSO_200M_050219_1,17441 HBL1_DMSO_200M_050219_1,17441, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17442 83.599 238.0 596190.0 25 0 39271.0 -1 0 113 914.4333678459044 1826.852182758609 2 914.9391967654228 MULTI CID FTMS 0 0 0 17431 455829.5 0.6575351456693013 -6 0.4780120849609375 11 3 {[QV]|[N{I|L}]|[RA]|[KV]}TC{[QS]|[NT]}AQQNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 74.039 0.0 0.0 4.0528 4.0528 82.362 0.0 0.0 0.0 9.039651227420832 49.206094119810544 9.039651227420832 10.0 0 0.5484550065040282 1.3010299956639813 0.3252574989159953 0.75 {[QV]|[N{I|L}]|[RA]|[KV]}TC{[QS]|[NT]}AQQNA{M(Oxidation (M))|F}YQV{I|L};MVQY{M(Oxidation (M))|F}ANQQ[RN]DA{[QD]|[EN]|[WG]|[KD]|[RS]};MVQY{M(Oxidation (M))|F}ANQQA[QA]DA{[QD]|[EN]|[WG]|[KD]|[RS]};[YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[{M(Oxidation (M))|F}V][HN]GC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQAE[WP]C{I|L};[KT]EY{M(Oxidation (M))|F}ANQQ[RN]DA{[QD]|[EN]|[WG]|[KD]|[RS]};[KT]EY{M(Oxidation (M))|F}ANQQA[QA]DA{[QD]|[EN]|[WG]|[KD]|[RS]};[KT]EY{M(Oxidation (M))|F}ANQ[{M(Oxidation (M))|F}V][HN]GGC{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[WR][DP]C(Carbamidomethyl (C)){I|L} 4.0528;3.5054;3.4901;3.4562;3.4439;3.4276;3.3553;3.34;3.2638;3.2628 -;-;-;-;-;-;-;-;-;- 4406 1 0.936 96883.7 1.0 11731 5709 17431 HBL1_DMSO_200M_050219_1,17442 HBL1_DMSO_200M_050219_1,17442, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17443 83.603 243.0 339670.0 25 0 40085.0 + 3497 CLFFCCVYSLL 11 109 655.8027557558897 0 655.8022338747978 PEAK CID FTMS 0 0 0 17431 412212.5625 0.7912511301186457 -1 0.0574569702148437 12 Unmodified _CLFFCCVYSLL_ ENST00000319540.8_1_4:83551331-83551523:-|nuORF 10.073929032068715 0.4495801685015257 3 {I|L}{I|L}CD{I|L} 5 8 24.157 0.0 0.0 1.8446 0.0 0.0 346.18751418623816 403.1128023736938 749.300316559932 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {I|L}{I|L}CD{I|L} 1.8446 - 150 + 1 0.936 68226.2 1.0 11732 5709 17431 HBL1_DMSO_200M_050219_1,17443 HBL1_DMSO_200M_050219_1,17443,CLFFCCVYSLL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17444 83.608 248.0 283780.0 25 0 37972.0 + 14715 IKERVKYSPYL 11 99 698.4012768110139 1394.7880006888277 2 698.4045898318291 MULTI CID FTMS 0 0 0 17431 419625.53125 1.0 0 0.0 13 Unmodified _IKERVKYSPYL_ REV__ENSG00000033170|ENST00000673929|FUT8;REV__nc|ENSG00000033170|Q9BYC5-3|FUT8;REV__nc|ENSG00000033170|Q9BYC5-4|FUT8 2.735195868890462 0.8622431031272658 3 {I|L} 1 -1 10.181 0.0 0.0 0.72994 0.0 0.0 1263.692631281404 0.0 1263.692631281404 0.0 5.576967093510348 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.72994 + + 40 + 1 0.936 60876.4 1.0 11733 5709 17431 HBL1_DMSO_200M_050219_1,17444 HBL1_DMSO_200M_050219_1,17444,IKERVKYSPYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17445 83.615 385.0 392470.0 25 0 36522.0 1445 ALEHETNL 8 160 309.4904109860205 925.4494035582616 3 309.4902221560478 MULTI CID FTMS 0 0 0 17431 341009.15625 0.2708421754277489 23 -1.62884521484375 14 Unmodified _ALEHETNL_ ENST00000441249.1_1_6:139592511-139592610:+|nuORF 6.354104778181461 0.7857632046190106 3 {I|L} 1 7 13.495 0.0 0.0 1.4582 0.0 0.0 794.3541714799397 0.0 794.3541714799397 0.0 2.815665529067955 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4582 + + 136 + 1 0.936 123342.1 1.0 11734 5709 17431 HBL1_DMSO_200M_050219_1,17445 HBL1_DMSO_200M_050219_1,17445,ALEHETNL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17447 83.622 216.0 784160.0 25 0 94677.0 + 1252 AILEKMPLV 9 147 507.3076684136869 1012.6007838941738 2 507.3084289431572 MULTI CID FTMS 0 0 0 17446 598387.5 0.6652255369009725 -4 0.2275161743164062 1 Unmodified _AILEKMPLV_ ENSG00000213983|ENST00000397120|AP1G2;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF 65.23502041540118 0.0231836506122253 3 [{I|L}A]{I|L}EKM{I|L}PV 9 2 + 76.454 0.0 0.0 7.5503 7.5503 86.495 0.0 0.0 0.0 18.50711233356286 3.802112417116064 3.802112417116064 3.802112417116064 0 1.8243923658886183 2.0 0.2614393726401688 0.2742275032520141 [{I|L}A]{I|L}EKM{I|L}PV;[{I|L}A]{I|L}EKMP{I|L}V;[{I|L}A]{I|L}EKMPV{I|L};[{I|L}A]{I|L}EKM{I|L}VP;VVVEKM{I|L}PV;VVVEKMP{I|L}V;VVVEKMPV{I|L};[{I|L}A]{I|L}EK{[NV]|[RG]}N{I|L};[{I|L}A]{I|L}EK{[NV]|[RG]}QV;[{I|L}A]{I|L}[{I|L}T]{[CA]|SS}{I|L}PV 7.5503;7.1748;7.1748;6.6375;5.7226;5.3471;5.3471;5.2971;5.2971;4.9021 -;+;-;-;-;-;-;-;-;- + 6070 + 1 0.927 136583.9 1.0 11735 5710 17446 HBL1_DMSO_200M_050219_1,17447 HBL1_DMSO_200M_050219_1,17447,AILEKMPLV True True AILEKMPLV 83.622081 507.308428943157 25271126.0 17446.0 ENSG00000213983|ENST00000397120|AP1G2;;ENST00000535852.6_1_14:24028960-24035624:-|nuORF;;ENST00000460049.6_1_14:24028960-24033376:-|nuORF 5.961820602416992 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17448 83.627 250.0 499130.0 25 0 40236.0 + 18905 LAVSEKGLVPL 11 145 563.3466066300224 1124.6786603268447 2 563.3475219607353 MULTI CID FTMS 0 0 0 17446 264472.6875 0.9541337174313564 1 -0.0277862548828125 2 Unmodified _LAVSEKGLVPL_ REV__ENST00000593076.1_1_17:73910704-73911112:-|nuORF 16.149105407346934 0.6992268271266642 3 {I|L}P 2 -1 16.682 0.0 0.0 1.4833 0.0 0.0 896.5306328383666 0.0 896.5306328383666 0.0 3.1875876262441274 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}P 1.4833 - 1037 + 1 0.927 99938.9 1.0 11736 5710 17446 HBL1_DMSO_200M_050219_1,17448 HBL1_DMSO_200M_050219_1,17448,LAVSEKGLVPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17449 83.628 14.0 8366600.0 25 0 2142300.0 + 41854 VPYLVGQVV 9 95 487.289371931678 972.564190930156 2 487.2894775271416 MULTI CID FTMS 0 0 0 17446 4207192.5 0.2233557110615424 -4 0.2275161743164062 3 Unmodified _VPYLVGQVV_ ENSG00000126088|ENST00000246337|UROD;ENST00000494399.5_1_1:45478966-45479784:+|nuORF 42.96799951952854 0.0591636306142405 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGQVVV 9 2 + 57.686 0.0 0.0 5.9313 5.9313 75.576 0.0 0.0 0.0 6.320232147054057 10.330145895351848 6.320232147054057 0.0443219174010778 0 0.8182503180159344 1.154901959985743 0.0 0.6861818737241735 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}VGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGVQVV;[VP]Y{I|L}GQVVV;[VP]Y{I|L}VGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GVQVV;[{I|L}V]{M(Oxidation (M))|F}{I|L}GQVVV;[{I|L}V]{M(Oxidation (M))|F}{I|L}VGQVV 5.9313;5.9268;5.6218;5.6172;5.4362;5.2815;5.2769;5.1266;4.9501;4.9456 -;-;-;-;-;-;+;-;-;- + 756 1 0.927 90746.5 1.0 11737 5710 17446 HBL1_DMSO_200M_050219_1,17449 HBL1_DMSO_200M_050219_1,17449,VPYLVGQVV True True VPYLVGQVV 83.627925 487.289477527142 461954432.0 17446.0 ENST00000494399.5_1_1:45478966-45479784:+|nuORF;;ENSG00000126088|ENST00000246337|UROD 4.5027650197347 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17450 83.633 262.0 429380.0 25 0 65743.0 -1 0 65 1133.567309558392 0 1133.567309558392 PEAK CID FTMS 0 0 0 -1 0 4 3 QVD{I|L} 4 -1 13.928 0.0 0.0 0.61489 0.0 0.0 1211.6785306286415 595.1795748346311 1806.8581054632728 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QVD{I|L} 0.61489 - 138 + 1 0.927 74333.7 1.0 11738 5710 17446 HBL1_DMSO_200M_050219_1,17450 HBL1_DMSO_200M_050219_1,17450, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17451 83.638 262.0 171670.0 25 0 13089.0 + 21485 LPHREKYKIPF 11 83 714.4137723800449 1426.8129918268896 2 714.4128295779228 MULTI CID FTMS 0 0 0 17446 310287.40625 0.7565005644118231 6 -0.2350997924804687 5 Unmodified _LPHREKYKIPF_ REV__ENSG00000137513|ENST00000281038|NARS2 3.5964929083625545 0.858179447565866 3 [KP]{I|L}{I|L} 4 -1 13.188 0.0 0.0 0.92427 0.0 0.0 0.0 972.4722074853458 972.4722074853458 -5.2287874528033775 0.0 -5.2287874528033775 0.0 0 0.0 0.0 0.0 0.0 [KP]{I|L}{I|L} 0.92427 - 171 1 0.927 41224.9 1.0 11739 5710 17446 HBL1_DMSO_200M_050219_1,17451 HBL1_DMSO_200M_050219_1,17451,LPHREKYKIPF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17452 83.643 268.0 477680.0 25 0 21577.0 -1 HPCGEDCVQL 10 146 607.7497731067405 1213.4849932802808 2 607.7491943240166 MULTI CID FTMS 0 0 0 17446 231719.734375 0.5448371116628447 -2 0.109405517578125 6 2 Carbamidomethyl (C) _HPC(Carbamidomethyl (C))GEDC(Carbamidomethyl (C))VQL_ ENSG00000124201|ENST00000396105|ZNFX1 10.073929032068715 0.6785112666868882 3 [DV]Q 3 -1 20.458 0.0 0.0 1.6859 0.0 0.0 0.0 868.3071728059246 868.3071728059246 1.0328622251623862 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [DV]Q 1.6859 - 200 1 0.927 100524.9 1.0 11740 5710 17446 HBL1_DMSO_200M_050219_1,17452 HBL1_DMSO_200M_050219_1,17452,HPCGEDCVQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17454 83.653 456.0 341820.0 25 0 44838.0 + 8672 EVIKKVLNL 9 172 352.56539314413567 1054.674350032607 3 352.5654479861259 MULTI CID FTMS 0 0 0 17453 148412.71875 0.5940935117971333 4 -0.1595687866210937 1 Unmodified _EVIKKVLNL_ REV__ENSG00000241973|ENST00000255882|PI4KA;REV__ENST00000485963.5_1_22:21152870-21213097:-|nuORF 15.248480904072842 0.4239247793462406 3 [KG]{I|L}DK{I|L} 6 -1 34.085 0.0 0.0 3.2318 0.0 0.0 0.0 397.2577379527467 397.2577379527467 17.64182118169877 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 [KG]{I|L}DK{I|L} 3.2318 - 300 + 1 0.927 123884.0 1.0 11741 5711 17453 HBL1_DMSO_200M_050219_1,17454 HBL1_DMSO_200M_050219_1,17454,EVIKKVLNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17455 83.656 153.0 581410.0 25 0 64868.0 + 30925 RKERRVLQL 9 109 599.3798704394284 0 599.3796264529228 PEAK CID FTMS 0 0 0 17453 1389332.875 1.0 0 0.0 2 Unmodified _RKERRVLQL_ REV__ENSG00000130307|ENST00000252597|USHBP1 7.289230182591677 0.3433663536648894 3 AYN 3 -1 11.427 0.0 0.0 0.95481 0.0 0.0 428.4337388263192 417.1261385553344 845.5598773816536 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AYN 0.95481 - 169 + 1 0.927 69373.3 1.0 11742 5711 17453 HBL1_DMSO_200M_050219_1,17455 HBL1_DMSO_200M_050219_1,17455,RKERRVLQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17456 83.659 177.0 1097500.0 25 0 103620.0 + 2913 AVGELLQEV 9 112 957.5248043820266 956.5175279154264 1 957.5265991091728 MULTI CID FTMS 0 0 0 17453 1108487.125 0.4997162719155291 3 -0.1183853149414062 3 Unmodified _AVGELLQEV_ ENSG00000161204|ENST00000429586|ABCF3;ENST00000463685.1_1_3:183903968-183904464:+|nuORF;ENST00000466416.1_1_3:183903995-183905333:+|nuORF;ENST00000478288.5_1_3:183903968-183905333:+|nuORF;ENST00000485921.5_1_3:183903968-183904686:+|nuORF;ENST00000498136.5_1_3:183903995-183905550:+|nuORF;nc|ENSG00000161204|Q9NUQ8-2|ABCF3 129.77232118876745 0.0070583558836035 3 {[VA]|[{I|L}G]}AD{I|L}{I|L}QEV 9 2 + 93.695 0.0 0.0 9.7954 9.7954 66.224 0.0 0.0 0.0 3.807196863200844 16.478174818886373 3.807196863200844 0.0 0 1.836696871556164 0.0 1.6906140654642814 0.3807196863200844 {[VA]|[{I|L}G]}AD{I|L}{I|L}QEV;{[VA]|[{I|L}G]}EG{I|L}{I|L}QEV;{[DA]|[EG]}{I|L}G{I|L}{I|L}QEV;{[VA]|[{I|L}G]}EG{I|L}{I|L}AGEV;{[VA]|[{I|L}G]}AD{I|L}{I|L}AGEV;[Q{I|L}]D{I|L}{I|L}QEV;{[VA]|[{I|L}G]}EG{I|L}{I|L}GAEV;{[VA]|[{I|L}G]}AD{I|L}{I|L}GAEV;{[VA]|[{I|L}G]}DA{I|L}{I|L}QEV;[Q{I|L}]D{I|L}{I|L}AGEV 9.7954;9.7954;9.3974;9.2854;9.2854;9.258;9.1967;9.1967;9.166;9.1403 -;-;-;-;-;-;-;-;-;- 29708 1 0.927 129706.0 1.0 11743 5711 17453 HBL1_DMSO_200M_050219_1,17456 HBL1_DMSO_200M_050219_1,17456,AVGELLQEV True True AVGELLQEV 83.65907 957.526599109173 14763426.0 17453.0 nc|ENSG00000161204|Q9NUQ8-2|ABCF3;;ENST00000466416.1_1_3:183903995-183905333:+|nuORF;;ENST00000463685.1_1_3:183903968-183904464:+|nuORF;;ENSG00000161204|ENST00000429586|ABCF3;;ENST00000498136.5_1_3:183903995-183905550:+|nuORF;;ENST00000485921.5_1_3:183903968-183904686:+|nuORF;;ENST00000478288.5_1_3:183903968-183905333:+|nuORF 4.830403168996175 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17457 83.664 255.0 699450.0 25 0 93211.0 + 32482 SALALAIKV 9 137 443.29226110241046 884.569969271621 2 443.2920715212822 MULTI CID FTMS 0 0 0 17453 725451.0 0.8672642636613621 2 -0.0721969604492187 4 Unmodified _SALALAIKV_ ENSG00000041357|ENST00000044462|PSMA4;nc|ENSG00000041357|P25789-2|PSMA4 74.92900055777586 0.0191935851694334 3 {[SA]|[TG]}{I|L}A{I|L}A{I|L}KV 9 0 + 73.969 0.0 0.0 8.3622 8.3622 88.115 0.0 0.0 0.0 22.376430167995885 3.979400086720375 3.979400086720375 3.979400086720375 0 1.0941876774005248 1.5228787452803376 0.0 0.2215141619232908 + + {[SA]|[TG]}{I|L}A{I|L}A{I|L}KV;{[SA]|[TG]}{I|L}A{I|L}A{I|L}VK;{[SA]|[TG]}{I|L}AVVVKV;{[SA]|[TG]}{I|L}AVVVVK 8.3622;7.9123;6.2563;5.8065 +;-;-;- + 794 + 1 0.927 139395.5 1.0 11744 5711 17453 HBL1_DMSO_200M_050219_1,17457 HBL1_DMSO_200M_050219_1,17457,SALALAIKV True True SALALAIKV 83.663808 443.292071521282 5493868.5 17453.0 ENSG00000041357|ENST00000044462|PSMA4;;nc|ENSG00000041357|P25789-2|PSMA4 5.064961592356364 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17458 83.668 219.0 692150.0 25 0 64421.0 + 16627 KEIDELTRYYK 11 136 729.3865238056543 1456.7584946781085 2 729.3851196169853 MULTI CID FTMS 0 0 0 17453 691182.5 1.0 0 0.0 5 Unmodified _KEIDELTRYYK_ REV__ENSG00000160293|ENST00000371850|VAV2;REV__nc|ENSG00000160293|P52735-2|VAV2;REV__nc|ENSG00000160293|P52735-3|VAV2 4.189502756095605 0.855381588458882 3 WYV{I|L}PK{I|L}Y 8 -1 34.334 0.0 0.0 2.3569 0.0 0.0 376.1721293965757 0.0 376.1721293965757 0.0 1.6701753360414529 0.0 0.0 0 0.0 0.0 0.0 0.0 WYV{I|L}PK{I|L}Y 2.3569 - 534 + 1 0.927 110267.4 1.0 11745 5711 17453 HBL1_DMSO_200M_050219_1,17458 HBL1_DMSO_200M_050219_1,17458,KEIDELTRYYK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17459 83.673 291.0 315460.0 25 0 37884.0 24083 LYFVKQRKV 9 102 394.2465797206628 1179.7179097621884 3 394.2461730837822 MULTI CID FTMS 0 0 0 17453 608963.0625 1.0 0 0.0 6 Unmodified _LYFVKQRKV_ ENST00000536441.6_2_11:94905351-94905537:-|nuORF 2.9952420565917617 0.8101217823238775 3 {I|L} 1 8 8.5835 0.0 0.0 0.72759 0.0 0.0 1048.622830271757 0.0 1048.622830271757 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.72759 + + 33 + 1 0.927 79739.5 1.0 11746 5711 17453 HBL1_DMSO_200M_050219_1,17459 HBL1_DMSO_200M_050219_1,17459,LYFVKQRKV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17460 83.68 386.0 362800.0 25 0 40217.0 -1 PDYCMKLCL 9 145 400.51328005006144 0 400.8478271365166 PEAK CID FTMS 0 0 0 17453 136960.5625 0.6850508758444952 -1 0.0277862548828125 7 2 Carbamidomethyl (C) _PDYC(Carbamidomethyl (C))MKLC(Carbamidomethyl (C))L_ ENST00000223073.6_1_7:127950586-127950808:-|nuORF 12.872603262515298 0.2793198337502027 3 D{I|L} 2 -1 9.464 0.0 0.0 1.1845 0.0 0.0 59.705074649147896 508.1740172530521 567.8790919022 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L} 1.1845 - 52 + 1 0.927 110243.8 1.0 11747 5711 17453 HBL1_DMSO_200M_050219_1,17460 HBL1_DMSO_200M_050219_1,17460,PDYCMKLCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17461 83.688 411.0 243180.0 25 0 22597.0 + 22542 LPWPFKQKV 9 125 381.56236751143865 1141.665273134516 3 381.5620910525322 MULTI CID FTMS 0 0 0 17453 242756.59375 1.0 0 0.0 8 Unmodified _LPWPFKQKV_ ENSG00000131323|ENST00000392745|TRAF3;nc|ENSG00000131323|Q13114-2|TRAF3 13.614867670302877 0.4681447649821485 3 {I|L}PWVK{I|L}HS 8 5 50.175 0.0 0.0 4.3949 0.0 0.0 0.0 178.09914575748283 178.09914575748283 22.72791930092417 0.0 0.0 0.0 0 0.1989700043360188 0.6020599913279624 0.5 0.4247425010840047 {I|L}PWVK{I|L}HS 4.3949 - 376 + 1 0.927 87487.3 1.0 11748 5711 17453 HBL1_DMSO_200M_050219_1,17461 HBL1_DMSO_200M_050219_1,17461,LPWPFKQKV False True LPWPFKQKV 83.687539 381.562091052532 6127081.0 17453.0 ENSG00000131323|ENST00000392745|TRAF3;;nc|ENSG00000131323|Q13114-2|TRAF3 4.344067494074504 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17463 83.692 1.5 20243000.0 25 0 1458300.0 + 45122 YQAPDIDVQL 10 64 581.2920547809874 1160.5695566287748 2 581.2933837771416 MULTI CID FTMS 0 0 0 17462 26379090.0 0.6731529581831531 1 -0.0273056030273437 1 Unmodified _YQAPDIDVQL_ ENSG00000105373|ENST00000246802|NOP53;ENST00000600410.5_1_19:48257983-48259211:+|nuORF 19.361941925380144 0.5226674314761524 3 D{I|L}[DP]CQ{I|L} 7 6 23.933 0.0 0.0 2.0621 0.0 0.0 358.21874073127475 0.0 358.21874073127475 0.0 10.00708268588923 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 D{I|L}[DP]CQ{I|L} 2.0621 - 124 + 1 0.92 31650.9 1.0 11749 5712 17462 HBL1_DMSO_200M_050219_1,17463 HBL1_DMSO_200M_050219_1,17463,YQAPDIDVQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17464 83.693 1.8 12099000.0 25 0 1351600.0 + 14000 IAAWELSL 8 46 451.7527689299804 901.4909849267608 2 451.7530090212822 MULTI CID FTMS 0 0 0 17462 9194337.0 0.1173562332894116 26 -2.0734100341796875 2 Unmodified _IAAWELSL_ REV__ENST00000343827.7_2_15:57511726-57511765:+|nuORF 15.768221252438446 0.6779680726941459 3 [{I|L}A][WE]S 5 -1 25.954 0.0 0.0 2.8791 0.0 0.0 0.0 312.1927420891233 312.1927420891233 7.753312076568903 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 [{I|L}A][WE]S 2.8791 - 10 1 0.92 23064.5 1.0 11750 5712 17462 HBL1_DMSO_200M_050219_1,17464 HBL1_DMSO_200M_050219_1,17464,IAAWELSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17465 83.694 3.4 12168000.0 25 0 2718200.0 + 20374 LLGPRLVLA 9 55 476.32097924230936 950.6274055514187 2 476.3212463259697 MULTI CID FTMS 0 0 0 17462 10241447.0 0.4069624860623121 3 -0.1146774291992187 3 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 34.10243960390752 0.1078313939113124 3 {I|L}{I|L}G 3 6 48.5 0.0 0.0 5.1019 0.0 0.0 0.0 664.4146212213499 664.4146212213499 28.807196863200843 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}{I|L}G 5.1019 + + 14 + 1 0.92 39374.6 1.0 11751 5712 17462 HBL1_DMSO_200M_050219_1,17465 HBL1_DMSO_200M_050219_1,17465,LLGPRLVLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17466 83.695 3.7 10923000.0 25 0 1361500.0 + 9847 FPFGKIGTV 9 54 483.2764472907161 964.5383416482322 2 483.2765380740166 MULTI CID FTMS 0 0 0 17462 8619425.0 0.5713500410676952 -2 0.0726776123046875 4 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 26.268140514670165 0.1969607489560049 3 [KG]{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}PE 8 7 + 49.373 0.0 0.0 5.1188 5.1188 86.701 0.0 0.0 0.0 3.679767852945943 36.07245681243349 3.679767852945943 13.802112417116064 0 0.4247425010840047 0.0 0.0 0.0 [KG]{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}PE;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}K{[QV]|[N{I|L}]|[RA]|[KV]}TV;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}GK{[VA]|[{I|L}G]}TV;{M(Oxidation (M))|F}[{I|L}T]{[SA]|[TG]}{I|L}[WK];{M(Oxidation (M))|F}V{[DS]|[MA]|[CV]|TT}K{[VA]|[{I|L}G]}TV 5.1188;3.6879;3.5528;1.7268;1.1684 -;-;+;-;- + 103 1 0.92 36868.9 1.0 11752 5712 17462 HBL1_DMSO_200M_050219_1,17466 HBL1_DMSO_200M_050219_1,17466,FPFGKIGTV False True FPFGKIGTV 83.695126 483.276538074017 2904534144.0 17462.0 ENSG00000148843|ENST00000369797|PDCD11 5.283334891001384 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17467 83.696 20.0 2274000.0 25 0 310210.0 + 14122 ALLDRIVSV 9 65 493.30601426922345 984.5974756052468 2 493.3059570193291 MULTI CID FTMS 0 0 0 17462 2290135.75 0.3446891517100761 3 -0.1146774291992187 5 Unmodified _IAVERVISV_ ENSG00000155561|ENST00000285968|NUP205 41.95555342248728 0.0647214845423414 3 EA{I|L}VSV 6 5 37.868 0.0 0.0 3.846 0.0 0.0 368.25410659004064 0.0 368.25410659004064 0.0 -1.0720996964786875 -1.0720996964786875 0.0 0 0.4247425010840047 0.0 0.0 0.0 EA{I|L}VSV 3.846 - 61 1 0.92 41099.5 1.0 11753 5712 17462 HBL1_DMSO_200M_050219_1,17467 HBL1_DMSO_200M_050219_1,17467,IAVERVISV True True ALLDRIVSV 83.696303 493.305957019329 74821528.0 17462.0 ENSG00000155561|ENST00000285968|NUP205 6.350334008534749 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17468 83.697 22.0 1514400.0 25 0 75470.0 + 22569 LPWTAEQVV 9 68 521.7820976720893 1041.5496424109783 2 521.7822753787041 MULTI CID FTMS 0 0 0 17462 1922114.75 0.0458310963593492 10 -0.5621719360351562 6 Unmodified _LPWTAEQVV_ ENSG00000175216|ENST00000529230|CKAP5;ENST00000528593.1_1_11:46804822-46806223:-|nuORF;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 34.10243960390752 0.1078313939113124 3 [{I|L}P]{[WT]|[RM]}AEQVV 9 0 + 36.774 0.0 0.0 3.5307 3.5307 69.256 0.0 0.0 0.0 0.7648373010427179 10.804615263062594 0.7648373010427179 0.7648373010427179 0 0.8935078169319297 1.3010299956639813 0.4247425010840047 0.0 + + [{I|L}P]{[WT]|[RM]}AEQVV;[WP]T{I|L}AEQVV;[{I|L}P]{[WT]|[RM]}AE[AG]VV;[WP]T{I|L}AE[AG]VV;[AG]QQ{I|L}AEQVV;[WP]T{[CP]|[EA]}{I|L}QVV;[WP]T{[CP]|[EA]}Q{I|L}VV;[AG]QQ{I|L}AE[AG]VV;[WP]T{[CP]|[EA]}{I|L}[AG]VV;[AG]QQ{[CP]|[EA]}{I|L}QVV 3.5307;3.4572;2.6466;2.5732;2.4945;2.4041;2.1151;1.6146;1.52;1.4414 +;-;-;-;-;-;-;-;-;- + 153 1 0.92 34573.5 1.0 11754 5712 17462 HBL1_DMSO_200M_050219_1,17468 HBL1_DMSO_200M_050219_1,17468,LPWTAEQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17469 83.699 61.0 1468300.0 25 0 156430.0 + 38968 TVPNYWLLI 9 99 559.8141901816448 1117.6138274300895 2 559.8141357302666 MULTI CID FTMS 0 0 0 17462 709336.875 0.0717651295853237 7 -0.3298721313476562 7 Unmodified _TVPNYWLLI_ REV__ENSG00000109805|ENST00000251496|NCAPG 30.63653989081413 0.1413794767160703 3 TSY{I|L}{I|L} 5 -1 47.351 0.0 0.0 4.2368 0.0 0.0 522.2989979474625 0.0 522.2989979474625 0.0 35.7744657025087 0.0 0.0 0 0.805462187404089 0.0 0.8494850021680094 0.0 TSY{I|L}{I|L} 4.2368 - 228 1 0.92 71505.5 1.0 11755 5712 17462 HBL1_DMSO_200M_050219_1,17469 HBL1_DMSO_200M_050219_1,17469,TVPNYWLLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17470 83.703 232.0 1007000.0 25 0 107620.0 + 17868 KQLESLGISL 10 190 544.3216511692519 1086.6287494053038 2 544.3251830935478 MULTI CID FTMS 0 0 0 17462 539688.8125 0.3766287573043338 -4 0.1820831298828125 8 Unmodified _KQLESLGISL_ ENSG00000197892|ENST00000524189|KIF13B 89.60864043982822 0.0093616182375763 3 {[TV]|[{I|L}S]}G{I|L}QS{I|L}G{I|L}S{I|L} 11 4 + 89.025 0.0 0.0 8.1928 8.1928 87.67 0.0 0.0 0.0 13.962551299848954 14.190166918179614 13.962551299848954 3.794686354676287 0 0.9247425010840048 1.3979400086720375 2.594989734451152 0.3252574989159953 {[TV]|[{I|L}S]}G{I|L}QS{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}GQS{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}G{I|L}QSAV{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}GQSAV{I|L}S{I|L};{[TV]|[{I|L}S]}G{I|L}TN{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}G{I|L}[AG]S{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}G{I|L}QKE{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}KQS{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}GTN{I|L}G{I|L}S{I|L};{[VA]|[{I|L}G]}S{I|L}QS{I|L}G{I|L}S{I|L} 8.1928;7.8436;7.5325;7.1833;7.1599;7.0534;7.0455;6.9079;6.8107;6.8051 -;-;-;-;-;-;-;-;-;- 8731 1 0.92 176606.4 1.0 11756 5712 17462 HBL1_DMSO_200M_050219_1,17470 HBL1_DMSO_200M_050219_1,17470,KQLESLGISL True True KQLESLGISL 83.70337 544.325183093548 10335841.0 17462.0 ENSG00000197892|ENST00000524189|KIF13B 4.534960110982259 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17471 83.708 227.0 975520.0 25 0 108530.0 + 30663 RFPEELTQTF 10 126 634.3192064214766 1266.623859909753 2 634.3190185427666 MULTI CID FTMS 0 0 0 17462 490666.09375 0.6000553609806514 1 -0.0273056030273437 9 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 40.23920728925047 0.1550410903091231 3 [{I|L}P]K{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C))TQT 9 7 50.816 0.0 0.0 4.0119 0.0 0.0 0.0 162.05237759003822 162.05237759003822 11.170664226808618 0.0 0.0 0.0 0 0.7059771852360797 1.3979400086720375 0.7134679910804405 0.3054621874040891 [{I|L}P]K{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C))TQT 4.0119 - 2069 1 0.92 165609.6 1.0 11757 5712 17462 HBL1_DMSO_200M_050219_1,17471 HBL1_DMSO_200M_050219_1,17471,RFPEELTQTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17472 83.712 248.0 445320.0 25 0 24492.0 + -1 SLRHCIENC 9 151 566.256268549092 1130.497984164984 2 567.7582885622978 MULTI CID FTMS 0 0 0 17462 399357.9375 0.9530764317173224 1 -0.0273056030273437 10 Carbamidomethyl (C) _SLRHCIENC(Carbamidomethyl (C))_ REV__ENSG00000073331|ENST00000650871|ALPK1;REV__ENST00000504745.1_1_4:113347516-113362363:+|nuORF;REV__nc|ENSG00000073331|Q96QP1-2|ALPK1 20.453626601364224 0.2830276176381075 3 {[TV]|[{I|L}S]}[YN][{M(Oxidation (M))|F}T]{I|L}NC(Carbamidomethyl (C)) 9 -1 + 19.19 0.0 0.0 1.6975 1.6975 67.199 0.0 0.0 0.0 1.1350927482751842 7.200306873017681 1.1350927482751842 1.1350927482751842 0 0.0 1.154901959985743 0.5941876774005249 0.5 {[TV]|[{I|L}S]}[YN][{M(Oxidation (M))|F}T]{I|L}NC(Carbamidomethyl (C));[KA]{[YD]|[{M(Oxidation (M))|F}M]}[{M(Oxidation (M))|F}T]{I|L}NC(Carbamidomethyl (C));{[DA]|[EG]}[YK][{M(Oxidation (M))|F}T]{I|L}NC(Carbamidomethyl (C));[YE]{I|L}[{M(Oxidation (M))|F}T][WC(Carbamidomethyl (C))]{I|L};{[TV]|[{I|L}S]}[YN][{M(Oxidation (M))|F}T]M[KQ];[KP]{[C(Carbamidomethyl (C))E]|[WC]}[NP]{I|L}NC(Carbamidomethyl (C)) 1.6975;1.5971;1.494;0.23717;0.099131;0.070889 -;-;-;-;-;- 571 1 0.92 88790.1 1.0 11758 5712 17462 HBL1_DMSO_200M_050219_1,17472 HBL1_DMSO_200M_050219_1,17472,SLRHCIENC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17473 83.715 123.0 338190.0 25 0 31186.0 17986 KRRKDRRDRML 11 75 510.6343804416057 0 510.6344177126884 PEAK CID FTMS 0 0 0 17462 273285.09375 0.905511396029391 -2 0.0726776123046875 11 Unmodified _KRRKDRRDRML_ ENSG00000198756|ENST00000361927|COLGALT2 0.5059551277355931 0.4761840153648598 3 M{I|L} 2 9 9.464 0.0 0.0 0.92852 0.0 0.0 163.78620365489263 608.3216646783811 772.1078683332737 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + M{I|L} 0.92852 + + 47 + 1 0.92 42186.0 1.0 11759 5712 17462 HBL1_DMSO_200M_050219_1,17473 HBL1_DMSO_200M_050219_1,17473,KRRKDRRDRML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17475 83.719 5.6 5016700.0 25 0 997640.0 + 17883 KQMEQISQFL 10 50 626.3237001870148 1250.6328474408294 2 626.3240234255791 MULTI CID FTMS 0 0 0 17474 5322559.5 0.5457356198092894 2 -0.087371826171875 1 Unmodified _KQMEQISQFL_ ENSG00000144834|ENST00000478951|TAGLN3;ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 38.17557092003332 0.1768326257063233 3 {[QS]|[NT]}[TP][KC]{I|L}SQ{M(Oxidation (M))|F}{I|L} 11 5 + 45.774 0.0 0.0 3.6601 3.6601 84.407 0.0 0.0 0.0 3.8238697577918046 31.79493224311532 3.8238697577918046 45.774332329835694 0 0.7429928190999391 0.0 1.1989700043360187 0.7614393726401688 {[QS]|[NT]}[TP][KC]{I|L}SQ{M(Oxidation (M))|F}{I|L} 3.6601 - 54 1 0.92 31710.9 1.0 11760 5713 17474 HBL1_DMSO_200M_050219_1,17475 HBL1_DMSO_200M_050219_1,17475,KQMEQISQFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17476 83.724 270.0 516470.0 25 0 53306.0 + 12027 GQAEPESVLLV 11 166 571.3092834216933 1140.6040139101865 2 571.3092529177666 MULTI CID FTMS 0 0 0 17474 182818.765625 0.1204958346944433 7 -0.422271728515625 2 Unmodified _GQAEPESVLLV_ ENSG00000127054|ENST00000435064|INTS11;ENST00000461514.6_1_1:1248044-1249114:-|nuORF;ENST00000470030.6_1_1:1247241-1248711:-|nuORF;ENST00000478641.5_1_1:1248044-1248711:-|nuORF;ENST00000485710.5_1_1:1247522-1249186:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 53.40400417844725 0.0987786977674846 3 [QA]GEW[EP]{I|L} 8 7 36.894 0.0 0.0 3.2346 0.0 0.0 0.0 227.1426240998928 227.1426240998928 9.33526428114272 0.0 0.0 0.0 0 0.7742275032520141 0.4559319556497244 0.805462187404089 0.6694451763165201 [QA]GEW[EP]{I|L} 3.2346 - 2927 1 0.92 107024.6 1.0 11761 5713 17474 HBL1_DMSO_200M_050219_1,17476 HBL1_DMSO_200M_050219_1,17476,GQAEPESVLLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17477 83.726 88.0 1116500.0 25 0 101780.0 -1 FYRCAIIY 8 117 553.2774186064408 0 553.2772094607353 PEAK CID FTMS 0 0 0 17474 810737.125 1.0 0 0.0 3 Carbamidomethyl (C) _FYRC(Carbamidomethyl (C))AIIY_ ENST00000559500.1_1_15:69553387-69553519:+|nuORF 15.768221252438446 0.4767174489346095 3 PPNVV 5 -1 14.412 0.0 0.0 1.3048 0.0 0.0 311.0509516318869 284.17331873111567 595.2242703630026 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPNVV 1.3048 - 132 + 1 0.92 80168.2 1.0 11762 5713 17474 HBL1_DMSO_200M_050219_1,17477 HBL1_DMSO_200M_050219_1,17477,FYRCAIIY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17478 83.731 264.0 907770.0 25 0 87072.0 + 25363 NAVVELVTV 9 160 472.276479072866 942.538405212532 2 472.2765685915947 MULTI CID FTMS 0 0 0 17474 558495.0 0.3390676345813835 -1 0.0273056030273437 4 Unmodified _NAVVELVTV_ ENSG00000182220|ENST00000636580|ATP6AP2;nc|ENSG00000182220|O75787-2|ATP6AP2 61.357469665136826 0.0253304979873734 3 {[QG]|[NA]}VVE{I|L} 6 3 52.277 0.0 0.0 5.5465 0.0 0.0 0.0 314.1723471327211 314.1723471327211 14.006468561619158 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3054621874040891 1.2847658448249766 + {[QG]|[NA]}VVE{I|L} 5.5465 + + 1935 1 0.92 181031.8 1.0 11763 5713 17474 HBL1_DMSO_200M_050219_1,17478 HBL1_DMSO_200M_050219_1,17478,NAVVELVTV True True NAVVELVTV 83.730728 472.276568591595 9095134.0 17474.0 ENSG00000182220|ENST00000636580|ATP6AP2;;nc|ENSG00000182220|O75787-2|ATP6AP2 3.7585951487223306 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17479 83.733 99.0 1418900.0 25 0 179710.0 + 4614 DAYTVLTRI 9 130 526.2927680362789 1050.5709831393576 2 526.2938720583916 MULTI CID FTMS 0 0 0 17474 494319.03125 0.0116820555516482 13 -0.9807357788085938 5 Unmodified _DAYTVLTRI_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 89.40071534611396 0.0152361884002446 3 {[DA]|[EG]}YTV{I|L}TR{I|L} 9 0 + 86.311 0.0 0.0 8.2156 8.2156 91.388 0.0 0.0 0.0 60.31396904416737 13.768207588526325 13.768207588526325 7.271212547196626 0 1.4386218330464624 1.5228787452803376 1.2416440611282626 0.2887254899964357 + + {[DA]|[EG]}YTV{I|L}TR{I|L};{[DA]|[EG]}Y{I|L}S{I|L}TR{I|L};{[DA]|[EG]}YT{I|L}VTR{I|L};{[DA]|[EG]}YTV[KQ]KV;{[DA]|[EG]}Y{I|L}TVTR{I|L};WYT{I|L}E{I|L}KV;{[DA]|[EG]}Y{I|L}S[KQ]KV;{[DA]|[EG]}{I|L}YS{I|L}TR{I|L};WY{I|L}TE{I|L}KV;{[DA]|[EG]}{I|L}YTVTR{I|L} 8.2156;7.5235;7.3222;6.7262;6.63;6.3357;6.272;6.2298;5.6436;5.3364 +;-;-;-;-;-;-;-;-;- + 1426 + 1 0.92 112726.1 1.0 11764 5713 17474 HBL1_DMSO_200M_050219_1,17479 HBL1_DMSO_200M_050219_1,17479,DAYTVLTRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17480 83.738 297.0 647770.0 25 0 48179.0 + 44424 YMIAHITGL 9 165 509.7732701153108 1017.5319872974216 2 509.7738525271416 MULTI CID FTMS 0 0 0 17474 332110.0 0.3011261516017076 5 -0.2276840209960937 6 Unmodified _YMIAHITGL_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 77.98433622928108 0.0180125044636492 3 YM{I|L}AH{I|L}TG{I|L} 9 0 + 84.47 0.0 0.0 8.3014 8.3014 85.466 0.0 0.0 0.0 33.46787486224656 4.771212547196626 4.771212547196626 2.341532552839027 0 1.205112052208703 1.6989700043360187 1.3737125054200234 0.0 + + YM{I|L}AH{I|L}TG{I|L};YM{I|L}AH{I|L}AS{I|L};YM{I|L}AH{I|L}TAV;YM{I|L}AH{I|L}ATV;YM{I|L}[EP]RP{I|L};Y[YV]GT{I|L}[R{M(Oxidation (M))|F}];Y[YV]G{I|L}T[R{M(Oxidation (M))|F}];Y[YR]T{I|L}[R{M(Oxidation (M))|F}];Y[YR]{I|L}T[R{M(Oxidation (M))|F}];Y[YV]{I|L}GT[R{M(Oxidation (M))|F}] 8.3014;8.0713;7.8325;7.6024;4.941;3.846;3.574;3.255;2.983;2.6355 +;-;-;-;-;-;-;-;-;- + 1509 + 1 0.92 154606.9 1.0 11765 5713 17474 HBL1_DMSO_200M_050219_1,17480 HBL1_DMSO_200M_050219_1,17480,YMIAHITGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17481 83.744 292.0 309710.0 25 0 33312.0 + 22540 LPWPFRNKV 9 96 578.8306695700735 1155.646786206947 2 578.8339111208916 MULTI CID FTMS 0 0 0 17474 240383.0625 0.5130512197630412 -9 0.5036163330078125 7 Unmodified _LPWLGKMAQL_ nc|ENSG00000056558|Q13077-2|TRAF1;ENSG00000056558|ENST00000373887|TRAF1 39.957323273325 0.1580177220464651 3 {I|L}PWVA 5 6 46.031 0.0 0.0 3.9831 0.0 0.0 0.0 586.2989596002561 586.2989596002561 18.58349385648225 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {I|L}PWVA 3.9831 - 111 + 1 0.92 74772.7 1.0 11766 5713 17474 HBL1_DMSO_200M_050219_1,17481 HBL1_DMSO_200M_050219_1,17481,LPWLGKMAQL False False LPWPFRNKV 83.74367 578.833911120892 247535269.0 17474.0 nc|ENSG00000056558|Q13077-2|TRAF1;;ENSG00000056558|ENST00000373887|TRAF1 5.313477198282878 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17482 83.749 308.0 607870.0 25 0 49481.0 + 14831 LIFPKEFETA 10 171 597.8223211215417 1193.6300893098833 2 597.8239013552666 MULTI CID FTMS 0 0 0 17474 208078.390625 0.2639064260389561 2 -0.087371826171875 8 Unmodified _ILFPTSFSSPV_ ENSG00000144231|ENST00000272645|POLR2D 36.12702656103203 0.2720571796884491 3 {I|L}{I|L}{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}E{M(Oxidation (M))|F} 8 6 68.829 0.0 0.0 5.7663 0.0 0.0 0.0 222.12513147525627 222.12513147525627 32.53947142117196 0.0 0.0 0.0 0 0.6747425010840047 2.0 1.9876954943324543 0.0 {I|L}{I|L}{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}E{M(Oxidation (M))|F} 5.7663 - 9696 + 1 0.92 139678.7 1.0 11767 5713 17474 HBL1_DMSO_200M_050219_1,17482 HBL1_DMSO_200M_050219_1,17482,ILFPTSFSSPV False False LIFPKEFETA 83.749293 597.823901355267 16612514.0 17474.0 ENSG00000144231|ENST00000272645|POLR2D 4.655064423878987 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17483 83.755 307.0 142750.0 25 0 22030.0 -1 0 62 828.1914550662041 0 828.1914550662041 PEAK CID FTMS 0 0 0 -1 0 9 3 {I|L}{I|L}NE 4 -1 19.87 0.0 0.0 1.2011 0.0 0.0 943.9627918689332 238.1198366754516 1182.0826285443848 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 {I|L}{I|L}NE 1.2011 - 362 + 1 0.92 36493.2 1.0 11768 5713 17474 HBL1_DMSO_200M_050219_1,17483 HBL1_DMSO_200M_050219_1,17483, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17484 83.761 334.0 81974.0 25 0 6040.5 -1 0 53 1109.052294909954 0 1109.052294909954 PEAK CID FTMS 0 0 0 -1 0 10 3 {I|L} 1 -1 6.9897 0.0 0.0 0.31541 0.0 0.0 1877.8585743396363 222.12488733463127 2099.983461674268 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.31541 - 11 + 1 0.92 27755.2 1.0 11769 5713 17474 HBL1_DMSO_200M_050219_1,17484 HBL1_DMSO_200M_050219_1,17484, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17486 83.771 356.0 262020.0 25 0 21806.0 8990 FATRCDEYVT 10 143 602.7675048708916 0 602.7675048708916 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _FATRCDEYVT_ ENSG00000151746|ENST00000652176|BICD1;nc|ENSG00000151746|Q96G01-3|BICD1;nc|ENSG00000151746|Q96G01-4|BICD1 7.289230182591677 0.3953776778296116 3 {I|L}D 2 9 10.833 0.0 0.0 0.90007 0.0 0.0 890.3196645655462 82.06704889468983 972.386713460236 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6139829889124311 0.0 {I|L}D 0.90007 - 131 + 1 0.904 69456.2 1.0 11770 5714 17485 HBL1_DMSO_200M_050219_1,17486 HBL1_DMSO_200M_050219_1,17486,FATRCDEYVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17487 83.776 272.0 940420.0 25 0 85523.0 + 22544 LPWPFRNKV 9 159 386.2258333005859 1155.6556705019575 3 386.2259399294853 MULTI CID FTMS 0 0 0 17485 736446.75 0.4422980078934732 -9 0.497528076171875 2 Unmodified _LPWPFRNKV_ ENSG00000056558|ENST00000373887|TRAF1;nc|ENSG00000056558|Q13077-2|TRAF1 45.69961567697781 0.0497987121815769 3 {I|L}PWVK 5 5 64.909 0.0 0.0 5.6167 0.0 0.0 0.0 529.2545260065061 529.2545260065061 42.80848766326997 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 1.274227503252014 {I|L}PWVK 5.6167 - 2226 + 1 0.904 214447.6 1.0 11771 5714 17485 HBL1_DMSO_200M_050219_1,17487 HBL1_DMSO_200M_050219_1,17487,LPWPFRNKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17488 83.778 126.0 689680.0 25 0 108750.0 + -1 ACTVIKGG 8 92 403.2157816783414 804.4170104234828 2 403.2157470583916 MULTI CID FTMS 0 0 0 17485 574994.0 0.961343353422136 -1 0.0461883544921875 3 Carbamidomethyl (C) _AC(Carbamidomethyl (C))TVIKGG_ REV__ENSG00000135424|ENST00000257879|ITGA7;REV__ENST00000554724.5_1_12:56094596-56105857:-|nuORF;REV__nc|ENSG00000135424|Q13683-10|ITGA7;REV__nc|ENSG00000135424|Q13683-3|ITGA7;REV__nc|ENSG00000135424|Q13683-9|ITGA7;REV__nc|ENSG00000135424|Q13683|ITGA7 13.50788311687929 0.7113601687236069 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}E{I|L}H 6 -1 + 36.128 0.0 0.0 4.4913 4.4913 73.872 0.0 0.0 0.0 6.478174818886373 1.870866433571443 1.870866433571443 1.870866433571443 0 0.3807196863200844 0.0 0.805462187404089 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}E{I|L}H;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EH{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L};[H{I|L}]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 4.4913;4.2587;2.4201;2.0306;1.4473 -;-;-;-;- 61 + 1 0.904 75197.2 1.0 11772 5714 17485 HBL1_DMSO_200M_050219_1,17488 HBL1_DMSO_200M_050219_1,17488,ACTVIKGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17489 83.783 272.0 284610.0 25 0 68871.0 + 17532 KPLQLPFWWKV 11 102 721.4219412597154 1440.8293295862306 2 721.4229614138603 MULTI CID FTMS 0 0 0 17485 405175.65625 0.547180020314536 6 -0.3760833740234375 4 Unmodified _KPLQLPFWWKV_ REV__ENSG00000163521|ENST00000295759|GLB1L;REV__nc|ENSG00000163521|Q6UWU2-2|GLB1L 2.735195868890462 0.8622431031272658 3 PT 2 -1 11.454 0.0 0.0 0.79493 0.0 0.0 720.4490700386991 519.2686861627561 1239.7177562014554 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 PT 0.79493 - 119 + 1 0.904 66089.4 1.0 11773 5714 17485 HBL1_DMSO_200M_050219_1,17489 HBL1_DMSO_200M_050219_1,17489,KPLQLPFWWKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17490 83.789 290.0 500170.0 25 0 41056.0 + -1 SIFPDSGHFNV 11 151 610.2923483595184 1218.5701437858368 2 610.2956420779228 MULTI CID FTMS 0 0 0 17485 374894.84375 1.0 0 0.0 5 Carbamidomethyl (C) _SLFC(Carbamidomethyl (C))SHINEI_ nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8 26.268140514670165 0.3785003716575977 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[YC]|[HE]}{[CA]|SS}NW{I|L} 10 -1 + 35.487 0.0 0.0 2.9121 2.9121 69.536 0.0 0.0 0.0 2.8243376898103563 1.2147820449879276 1.2147820449879276 1.7609125905568064 0 1.0 2.0 0.1595680409956017 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[YC]|[HE]}{[CA]|SS}NW{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[YC]|[HE]}[C(Carbamidomethyl (C))Q]W{I|L};{NN|[MP]|[D{I|L}]|[EV]}PCDPN{M(Oxidation (M))|F}[VS]{I|L};{NN|[MP]|[D{I|L}]|[EV]}PCDPNV{M(Oxidation (M))|F}S{I|L};[YQ]HDPN{M(Oxidation (M))|F}W{I|L};{NN|[MP]|[D{I|L}]|[EV]}PCDP{M(Oxidation (M))|F}N[VS]{I|L};{NN|[MP]|[D{I|L}]|[EV]}PCDNP{M(Oxidation (M))|F}[VS]{I|L};{NN|[MP]|[D{I|L}]|[EV]}PCDNPV{M(Oxidation (M))|F}S{I|L};[VS][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}W{I|L};{NN|[MP]|[D{I|L}]|[EV]}PCDPGG{M(Oxidation (M))|F}[VS]{I|L} 2.9121;2.7676;2.6804;2.4987;2.3045;2.2888;2.2173;2.0357;2.0227;1.9313 -;-;-;-;-;-;-;-;-;- 2503 1 0.904 107918.6 1.0 11774 5714 17485 HBL1_DMSO_200M_050219_1,17490 HBL1_DMSO_200M_050219_1,17490,SLFCSHINEI False False SIFPDSGHFNV 83.788545 610.295642077923 4535207.0 17485.0 nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 5.8197933832804365 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17491 83.794 286.0 304340.0 25 0 26595.0 + 44378 YLTEQLVAIYH 11 129 675.3608283152263 1348.7071036972525 2 675.3600341677666 MULTI CID FTMS 0 0 0 17485 356992.65625 1.0 0 0.0 6 Unmodified _YLTEQLVAIYH_ ENST00000542112.5_1_11:62621512-62623345:-|nuORF 65.23502041540118 0.047899150100457 3 [Y{I|L}]TEQ{I|L}VA{I|L}YH 11 0 + 96.261 0.0 0.0 7.1373 7.1373 91.928 0.0 0.0 0.0 76.87585772141591 15.07062321345802 15.07062321345802 9.542425094393252 0 0.7302046884880937 2.0 0.0 0.4247425010840047 + + [Y{I|L}]TEQ{I|L}VA{I|L}YH;[Y{I|L}]TEQ{I|L}{I|L}G{I|L}YH;[Y{I|L}]TE[AG]{I|L}VA{I|L}YH;[Y{I|L}]TE[PS]RA{I|L}YH;[Y{I|L}]TE[AG]{I|L}{I|L}G{I|L}YH;[Y{I|L}]TEQ{I|L}VA{[WN]|[YH]}{I|L};[Y{I|L}]TEQ{I|L}V{[{M(Oxidation (M))|F}H]|[RQ]}S{I|L};[Y{I|L}]TEQ{I|L}{I|L}EPM{I|L};[Y{I|L}]TE[AG]{I|L}VA{[WN]|[YH]}{I|L};[Y{I|L}]TEQ{I|L}{I|L}G{[WN]|[YH]}{I|L} 7.1373;6.4298;6.1455;5.9314;5.438;5.3675;4.8068;4.8037;4.6907;4.66 +;-;-;-;-;-;-;-;-;- + 1392 + 1 0.904 68879.1 1.0 11775 5714 17485 HBL1_DMSO_200M_050219_1,17491 HBL1_DMSO_200M_050219_1,17491,YLTEQLVAIYH True True YLTEQLVAIYH 83.793801 675.360034167767 1783076.75 17485.0 ENST00000542112.5_1_11:62621512-62623345:-|nuORF 8.255090395609537 2.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17492 83.799 302.0 172090.0 25 0 22702.0 -1 0 71 1091.3822096724502 0 1091.383227527142 PEAK CID FTMS 0 0 0 17485 338713.0 1.0 0 0.0 7 3 RVY{I|L} 4 -1 11.402 0.0 0.0 0.52285 0.0 0.0 1290.3027971751756 356.10862146549067 1646.4114186406662 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 RVY{I|L} 0.52285 - 219 + 1 0.904 40161.7 1.0 11776 5714 17485 HBL1_DMSO_200M_050219_1,17492 HBL1_DMSO_200M_050219_1,17492, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17493 83.802 140.0 805640.0 25 0 55823.0 + -1 DLVHRCVV 8 143 499.2681232584378 996.5216935836756 2 499.2679626345634 MULTI CID FTMS 0 0 0 17485 286448.09375 1.0 0 0.0 8 Carbamidomethyl (C) _DLVHRC(Carbamidomethyl (C))VV_ REV__ENSG00000086758|ENST00000262854|HUWE1;REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;REV__nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 21.74664581756881 0.5868176546531598 3 [TP]Y{I|L}{[HG]|PP}WA 8 -1 19.446 0.0 0.0 1.9514 0.0 0.0 0.0 68.05144678287343 68.05144678287343 -0.2199688590104571 0.0 -0.2199688590104571 0.0 0 0.1643943297944484 1.2218487496163564 0.0 0.0 [TP]Y{I|L}{[HG]|PP}WA 1.9514 - 1337 + 1 0.904 89093.1 1.0 11777 5714 17485 HBL1_DMSO_200M_050219_1,17493 HBL1_DMSO_200M_050219_1,17493,DLVHRCVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17495 83.806 0.34 135220000.0 25 0 25040000.0 + 4643 DAYVLPKLY 9 57 541.2999781941046 1080.585403455009 2 541.3008300662041 MULTI CID FTMS 0 0 0 17494 136833456.0 0.483368939399677 6 -0.3724365234375 1 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 37.97399986684836 0.0865783450051559 3 {[DA]|[EG]}YV{I|L}PK{I|L}Y 9 0 {[DA]|[EG]}Y + + 36.151 19.666 5.6328 3.3455 3.3455 50.891 0.0 0.0 0.0 0.0 16.485709800639153 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L}Y 3.3455 + + 54 + 1 0.904 42178.7 1.0 11778 5715 17494 HBL1_DMSO_200M_050219_1,17495 HBL1_DMSO_200M_050219_1,17495,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17496 83.807 4.7 7662700.0 25 0 828580.0 + 24296 MAYPDLNEI 9 62 533.250190119819 1064.4858273064378 2 533.2505981326103 MULTI CID FTMS 0 0 0 17494 10456605.0 0.4287090266482019 7 -0.4474945068359375 2 Unmodified _MAYPDLNEI_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 23.1484247019978 0.2366544122328345 3 {[DS]|[MA]|[CV]|TT}YW[HA]{[WT]|[RM]} 8 6 + 27.893 0.0 0.0 2.6203 2.6203 81.749 0.0 0.0 0.0 8.199849938126889 -3.177418734074564 -3.177418734074564 27.89258754269092 0 0.4247425010840047 1.3010299956639813 0.0 0.0 {[DS]|[MA]|[CV]|TT}YW[HA]{[WT]|[RM]} 2.6203 - 104 1 0.904 33799.3 1.0 11779 5715 17494 HBL1_DMSO_200M_050219_1,17496 HBL1_DMSO_200M_050219_1,17496,MAYPDLNEI False True MAYPDLNEI 83.807449 533.25059813261 700355040.0 17494.0 chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;;nc|ENSG00000079263|Q13342-5|SP140;;nc|ENSG00000079263|Q13342-2|SP140;;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-6|SP140;;nc|ENSG00000079263|Q13342-4|SP140;;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;;ENSG00000079263|ENST00000392045|SP140;;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-3|SP140 6.455176989237468 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17497 83.809 10.0 3844000.0 25 0 469150.0 + 24519 MIPTELQQL 9 60 536.7894635718493 1071.5643742104985 2 536.7895995974541 MULTI CID FTMS 0 0 0 17494 3885944.0 0.6721088783645276 6 -0.3724365234375 3 Unmodified _MIPTELQQL_ ENSG00000114861|ENST00000649528|FOXP1;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1 28.486842064014134 0.1687311288560894 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKM{I|L}E 7 6 40.035 0.0 0.0 3.7362 0.0 0.0 0.0 195.07821069888908 195.07821069888908 17.86847877494104 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.3807196863200844 0.5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKM{I|L}E 3.7362 - 297 + 1 0.904 34859.3 1.0 11780 5715 17494 HBL1_DMSO_200M_050219_1,17497 HBL1_DMSO_200M_050219_1,17497,MIPTELQQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17498 83.81 18.0 3741200.0 25 0 413580.0 + 44689 YPFKPPMI 8 70 496.7673432328521 991.5201335325042 2 496.7676879763603 MULTI CID FTMS 0 0 0 17494 3333067.75 0.2675542912251201 7 -0.4474945068359375 4 Unmodified _YPFKPPMI_ ENSG00000156587|ENST00000287156|UBE2L6 52.69307289633392 0.1265801145616722 3 YP{M(Oxidation (M))|F}KPPM{I|L} 8 0 + 70.007 0.0 0.0 7.0606 7.0606 94.282 0.0 0.0 0.0 50.82616259986081 11.814951104263898 11.814951104263898 25.51615737469504 0 0.7134679910804405 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[YV]PPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 7.0606;4.4872;2.3497 +;-;- + 86 + 1 0.904 56279.3 1.0 11781 5715 17494 HBL1_DMSO_200M_050219_1,17498 HBL1_DMSO_200M_050219_1,17498,YPFKPPMI True True YPFKPPMI 83.809805 496.76768797636 728486960.0 17494.0 ENSG00000156587|ENST00000287156|UBE2L6 8.91533120473226 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17499 83.811 21.0 2429400.0 25 0 463230.0 + 9368 FIPPDGNFRL 10 47 588.3140312141247 1174.6135094950494 2 588.3143798708916 MULTI CID FTMS 0 0 0 17494 2289486.25 0.8439080494088185 -4 0.1595687866210937 5 Unmodified _FIPPDGNFRL_ ENSG00000070718|ENST00000396926|AP3M2;ENSG00000185009|ENST00000355264|AP3M1;ENST00000480373.1_1_10:75888732-75889691:-|nuORF;nc|ENSG00000070718|P53677-2|AP3M2 16.149105407346934 0.5765757077271437 3 DPP{[QN]|[E{I|L}]|[KN]} 5 7 26.026 0.0 0.0 2.2157 0.0 0.0 605.33012587715 0.0 605.33012587715 0.0 19.035984316004217 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 DPP{[QN]|[E{I|L}]|[KN]} 2.2157 - 15 1 0.904 43818.3 1.0 11782 5715 17494 HBL1_DMSO_200M_050219_1,17499 HBL1_DMSO_200M_050219_1,17499,FIPPDGNFRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17500 83.812 24.0 1879200.0 25 0 331440.0 1897 ALYSDRSI 8 62 462.7439258842263 923.4732988352524 2 462.7440063357353 MULTI CID FTMS 0 0 0 17494 1737822.125 0.9867607639547888 -7 0.2967605590820312 6 Unmodified _ALYSDRSI_ ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5 13.50788311687929 0.7113601687236069 3 [{I|L}A]P 3 6 34.705 0.0 0.0 3.7581 0.0 0.0 0.0 639.2776583307249 639.2776583307249 22.48651242028324 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P 3.7581 - 9 + 1 0.904 40775.7 1.0 11783 5715 17494 HBL1_DMSO_200M_050219_1,17500 HBL1_DMSO_200M_050219_1,17500,ALYSDRSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17501 83.813 25.0 2819500.0 25 0 458080.0 + 9903 FPFYGKPMRI 10 59 419.2266611861339 1254.6581541586015 3 419.2268249392509 MULTI CID FTMS 0 0 0 17494 1522552.0 0.1250811664839599 23 -1.9587326049804688 7 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 27.628801355627647 0.3479284626772844 3 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 67.612 0.0 0.0 5.3889 0.0 0.0 119.07405287910312 0.0 119.07405287910312 0.0 59.02880645020623 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.3889 - 215 1 0.904 62159.7 1.0 11784 5715 17494 HBL1_DMSO_200M_050219_1,17501 HBL1_DMSO_200M_050219_1,17501,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17502 83.817 161.0 794590.0 25 0 198320.0 31222 RLQRLERLP 9 88 590.866570803611 1179.718588674022 2 590.8666869997978 MULTI CID FTMS 0 0 0 17494 1308122.875 0.4601842569324793 4 -0.2151947021484375 8 Unmodified _RLQRLERLP_ ENSG00000167513|ENST00000301019|CDT1 1.0714618166137932 0.8772799748779447 3 {I|L} 1 8 9.7539 0.0 0.0 0.8268 0.0 0.0 1048.623387113278 0.0 1048.623387113278 0.0 5.774509799928715 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.8268 + + 17 + 1 0.904 103408.0 1.0 11785 5715 17494 HBL1_DMSO_200M_050219_1,17502 HBL1_DMSO_200M_050219_1,17502,RLQRLERLP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17503 83.818 69.0 1022600.0 25 0 153350.0 + 34127 SLLSHVEQL 9 109 513.2845795721952 1024.5546062111905 2 513.2849609255791 MULTI CID FTMS 0 0 0 17494 949581.25 0.5722043793993016 6 -0.3724365234375 9 Unmodified _SLLSHVEQL_ ENSG00000116670|ENST00000376692|MAD2L2;ENST00000376664.10_1_1:11735929-11741152:-|nuORF 49.93300154707207 0.0405168250806675 3 {[TV]|[{I|L}S]}HVTVE[Q{I|L}] 9 3 + 69.913 0.0 0.0 6.8238 6.8238 92.622 0.0 0.0 0.0 15.498037644757048 7.147642715192504 7.147642715192504 15.498037644757048 0 0.6989700043360187 2.0 0.7059771852360797 0.0 {[TV]|[{I|L}S]}HVTVE[Q{I|L}];{[TV]|[{I|L}S]}{I|L}{[CA]|SS}TV[YR];{[TV]|[{I|L}S]}HVE{[TV]|[{I|L}S]}[Q{I|L}];{[TV]|[{I|L}S]}{[MG]|[TS]}VTV[YR];{[TV]|[{I|L}S]}HD{I|L}{[TV]|[{I|L}S]}[Q{I|L}];[HV]TVTVE[Q{I|L}];{[TV]|[{I|L}S]}{[WT]|[RM]}TV[YR];{[TV]|[{I|L}S]}{I|L}{[CA]|SS}[YR]S{I|L};{[TV]|[{I|L}S]}{I|L}{[CA]|SS}T[YR]V;[HS]{I|L}VTVE[Q{I|L}] 6.8238;5.3111;5.2097;5.1169;4.744;4.7303;4.4846;4.2435;4.2239;4.1633 -;-;-;-;-;-;-;-;-;- 894 1 0.904 58631.6 1.0 11786 5715 17494 HBL1_DMSO_200M_050219_1,17503 HBL1_DMSO_200M_050219_1,17503,SLLSHVEQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17504 83.82 81.0 1225900.0 25 0 115270.0 + 3891 DALDKIRLI 9 106 528.8239744481274 1055.633395963055 2 528.8246337771416 MULTI CID FTMS 0 0 0 17494 818151.6875 0.005630371930805 26 -2.2902374267578125 10 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 59.36838082759317 0.0264317782606298 3 DA{I|L}DK{I|L}R{I|L}{I|L} 9 0 + 98.189 0.0 0.0 9.3015 9.3015 98.307 0.0 0.0 0.0 78.72540323302104 9.710536658395128 9.710536658395128 32.5 0 2.110924374808178 1.5228787452803376 0.3252574989159953 0.3807196863200844 + + DA{I|L}DK{I|L}R{I|L}{I|L};{I|L}DADK{I|L}R{I|L}{I|L} 9.3015;6.2227 +;- + 282 + 1 0.904 80944.1 1.0 11787 5715 17494 HBL1_DMSO_200M_050219_1,17504 HBL1_DMSO_200M_050219_1,17504,DALDKIRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17505 83.824 231.0 845830.0 25 0 90259.0 -1 LWRQPTLCL 9 161 593.8225332703377 1185.6305136074752 2 593.8229247927666 MULTI CID FTMS 0 0 0 17494 615767.875 0.5219083364437503 15 -1.283172607421875 11 Carbamidomethyl (C) _LWRQPTLC(Carbamidomethyl (C))L_ ENST00000354955.4_1_1:203310784-203310904:-|nuORF 24.67388899826682 0.2172451872415813 3 W{I|L}PNCS{I|L}{I|L}Q{I|L} 10 -1 + 65.143 0.0 0.0 5.4943 5.4943 81.836 0.0 0.0 0.0 43.23145724778165 2.830466571458743 2.830466571458743 5.012936175259348 0 0.805462187404089 2.0 0.2742275032520141 0.6421590589602533 W{I|L}PNCS{I|L}{I|L}Q{I|L};W{I|L}PNCS{I|L}{I|L}AG{I|L};W{I|L}PGGCS{I|L}{I|L}Q{I|L};W{I|L}PNCS{I|L}{I|L}AAV;W{I|L}PN[{I|L}T]VCQ{I|L};W{I|L}PN[{I|L}T]VAC(Carbamidomethyl (C)){I|L};W{I|L}PN[{I|L}T]VACG{I|L};W{I|L}PN[{I|L}T]VCAG{I|L};W{I|L}PGGCS{I|L}{I|L}AG{I|L};W{I|L}PN[{I|L}T]VNVM 5.4943;5.0715;4.7214;4.6053;4.5841;4.4352;4.3335;4.1613;4.0811;3.9869 -;-;-;-;-;-;-;-;-;- 1276 + 1 0.904 148559.6 1.0 11788 5715 17494 HBL1_DMSO_200M_050219_1,17505 HBL1_DMSO_200M_050219_1,17505,LWRQPTLCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17506 83.826 92.0 983670.0 25 0 118970.0 + 12576 GVIEKLLTS 9 128 480.2923743951735 958.570195857147 2 480.2922546267509 MULTI CID FTMS 0 0 0 17494 625844.6875 0.0772325769244106 10 -0.7459487915039062 12 Unmodified _GVIEKLLTS_ ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 45.739877483867886 0.0497104363764649 3 [VG]{I|L}T{I|L}{I|L}R 7 4 58.65 0.0 0.0 6.1184 0.0 0.0 0.0 203.0676073163845 203.0676073163845 42.57470395922184 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.6694451763165201 0.0 [VG]{I|L}T{I|L}{I|L}R 6.1184 - 921 1 0.904 71090.4 1.0 11789 5715 17494 HBL1_DMSO_200M_050219_1,17506 HBL1_DMSO_200M_050219_1,17506,GVIEKLLTS True True GVIEKLLTS 83.82638 480.292254626751 279357432.0 17494.0 nc|ENSG00000009307|O75534-2|CSDE1;;nc|ENSG00000009307|O75534-3|CSDE1;;nc|ENSG00000009307|O75534-4|CSDE1;;ENSG00000009307|ENST00000358528|CSDE1 6.0012288093566895 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17507 83.828 91.0 714450.0 25 0 72914.0 + 22870 LSAQLLSISYV 11 100 597.3431812214756 1192.671809509751 2 597.3435546755791 MULTI CID FTMS 0 0 0 17494 494892.1875 0.6034747598474126 -4 0.1595687866210937 13 Unmodified _LSAQLLSISYV_ ENSG00000196578|ENST00000358642|OR5AC2 32.037481411007896 0.3399527776090619 3 {[TV]|[{I|L}S]}KDR{I|L}S{I|L}[YV] 10 4 + 69.671 0.0 0.0 5.8416 5.8416 75.819 0.0 0.0 0.0 6.377942535578036 7.269987279362624 6.377942535578036 0.4139268515822465 0 1.0 1.6989700043360187 1.079689690656103 0.0 {[TV]|[{I|L}S]}KDR{I|L}S{I|L}[YV];{[TV]|[{I|L}S]}[QA]{I|L}S{I|L}S{I|L}[YV];{[TV]|[{I|L}S]}{I|L}[QA]S{I|L}S{I|L}[YV];{[TV]|[{I|L}S]}[QA]S{I|L}{I|L}S{I|L}[YV];{[TV]|[{I|L}S]}[PS]KS{I|L}S{I|L}[YV];{[TV]|[{I|L}S]}K[PS]S{I|L}S{I|L}[YV];{I|L}{I|L}S[QA]S{I|L}S{I|L}[YV];{[TV]|[{I|L}S]}KD[VG]{I|L}S{I|L}[YV];[KP]{[CA]|SS}{I|L}S{I|L}S{I|L}[YV];{[TV]|[{I|L}S]}KDK{NN|[MP]|[D{I|L}]|[EV]}{I|L}[YV] 5.8416;5.8069;5.726;5.5545;5.5545;5.4732;5.3068;5.0732;3.6546;3.4048 -;-;-;-;-;-;-;-;-;- 939 1 0.904 54359.3 1.0 11790 5715 17494 HBL1_DMSO_200M_050219_1,17507 HBL1_DMSO_200M_050219_1,17507,LSAQLLSISYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17508 83.833 260.0 793590.0 25 0 101020.0 + 41219 VPFENKLYL 9 177 561.8128937624899 1121.6112345917795 2 561.8132202029228 MULTI CID FTMS 0 0 0 17494 432206.875 0.8563384781510357 -4 0.1595687866210937 14 Unmodified _VPFENKLYL_ ENSG00000213160|ENST00000392647|KLHL23 51.629811660486645 0.0367964933207742 3 VP{M(Oxidation (M))|F}ENK{I|L}Y{I|L} 9 0 + 53.092 0.0 0.0 4.7336 4.7336 76.432 0.0 0.0 0.0 12.818656555439532 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.8935078169319297 1.2218487496163564 0.0 0.2887254899964357 + + VP{M(Oxidation (M))|F}ENK{I|L}Y{I|L};VP{M(Oxidation (M))|F}ENK{I|L}{I|L}Y;VP{M(Oxidation (M))|F}EGGK{I|L}Y{I|L};VP{M(Oxidation (M))|F}[KQ]EVY{I|L};VP{M(Oxidation (M))|F}EGGK{I|L}{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{[QG]|[NA]}{I|L}PVY{I|L};VP[KS][Y{I|L}]TVC{I|L};VP{M(Oxidation (M))|F}[KQ]EV{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{[QG]|[NA]}P{I|L}VY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH{I|L}PVY{I|L} 4.7336;4.4652;3.9126;3.6959;3.6442;3.5907;3.4578;3.4275;3.2681;3.1751 +;-;-;-;-;-;-;-;-;- + 6135 + 1 0.904 160098.9 1.0 11791 5715 17494 HBL1_DMSO_200M_050219_1,17508 HBL1_DMSO_200M_050219_1,17508,VPFENKLYL True True VPFENKLYL 83.833207 561.8134 5911830.0 17494.0 ENSG00000213160|ENST00000392647|KLHL23 5.233188470204671 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17509 83.838 268.0 344080.0 25 0 14316.0 -1 0 122 881.4093093382783 1760.8040657433564 2 881.9154540896416 MULTI CID FTMS 0 0 0 17494 386739.875 0.7813167969642497 -6 0.2393035888671875 15 3 [KT]EY{M(Oxidation (M))|F}ANQQN{M(Oxidation (M))|F}C(Carbamidomethyl (C))V{I|L} 14 -1 + 74.898 0.0 0.0 4.2536 4.2536 53.266 0.0 0.0 0.0 34.48274374507521 6.099743755888525 6.099743755888525 0.0 0 0.5994850021680094 0.0 0.0 0.7614393726401688 [KT]EY{M(Oxidation (M))|F}ANQQN{M(Oxidation (M))|F}C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQN{M(Oxidation (M))|F}VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQGG{M(Oxidation (M))|F}C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQGG{M(Oxidation (M))|F}VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AN[MT]VGMPC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AN[MT]VMGPC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQAGN{M(Oxidation (M))|F}VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQAGN{M(Oxidation (M))|F}C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQAGGG{M(Oxidation (M))|F}VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQAGGG{M(Oxidation (M))|F}C(Carbamidomethyl (C))V{I|L} 4.2536;4.2536;4.1917;4.1917;4.1816;4.0816;4.0657;4.0657;4.0048;4.0048 -;-;-;-;-;-;-;-;-;- 36717 + 1 0.904 66372.9 1.0 11792 5715 17494 HBL1_DMSO_200M_050219_1,17509 HBL1_DMSO_200M_050219_1,17509, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17510 83.844 291.0 500590.0 25 0 65057.0 + + 37599 KIMTISTLV 9 165 503.3050011662804 1004.5954493993607 2 503.3041564822197 MULTI CID FTMS 0 0 0 17494 373939.53125 0.4306873547121929 4 -0.2151947021484375 16 Unmodified _TLKMLSLSI_ ENST00000371621.4_1_20:49177909-49181565:+|nuORF 19.256988751693697 0.3154191944385105 3 {I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V 5 -1 19.521 0.0 0.0 1.9431 0.0 0.0 418.2425069875836 0.0 418.2425069875836 0.0 1.002480183341632 0.0 0.0 0 0.4247425010840047 0.0 0.3054621874040891 0.0 {I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V 1.9431 - 682 + 1 0.904 111638.0 1.0 11793 5715 17494 HBL1_DMSO_200M_050219_1,17510 HBL1_DMSO_200M_050219_1,17510,TLKMLSLSI False False KIMTISTLV 83.843517 503.30415648222 14278541.0 17494.0 ENST00000371621.4_1_20:49177909-49181565:+|nuORF 3.237862507502238 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17511 83.85 356.0 1064900.0 25 0 181840.0 + 9681 FLREYFERL 9 146 424.8958418863592 1271.6656962592776 3 424.8959533572197 MULTI CID FTMS 0 0 0 17494 324273.0 0.1208416578821229 -4 0.1595687866210937 17 Unmodified _FLREYFERL_ ENSG00000108946|ENST00000589228|PRKAR1A;ENST00000592194.1_1_17:66508623-66511738:+|nuORF;nc|ENSG00000108946|P10644-2|PRKAR1A 78.06048673739656 0.0179866705178931 3 {M(Oxidation (M))|F}{I|L}REY{M(Oxidation (M))|F}E{I|L}R 9 2 + 100.25 0.0 0.0 7.8831 7.8831 85.482 0.0 0.0 0.0 23.09514295739733 2.893330664027488 2.893330664027488 2.893330664027488 0 0.9247425010840048 0.8239087409443188 2.6549471895720984 0.7951140161145329 {M(Oxidation (M))|F}{I|L}REY{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}{I|L}REY{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}{I|L}REY{M(Oxidation (M))|F}{I|L}ER;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YEE{I|L}R;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YEER{I|L};{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YE{I|L}ER;{M(Oxidation (M))|F}{I|L}[VG]{M(Oxidation (M))|F}Y[NS]G{I|L}R;{M(Oxidation (M))|F}{I|L}[VG]{M(Oxidation (M))|F}Y[NS]GR{I|L};{M(Oxidation (M))|F}A{I|L}{I|L}TY{M(Oxidation (M))|F}E{I|L}R;{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}R{I|L}E 7.8831;7.6556;7.6308;6.6374;6.4099;6.3851;6.028;5.8005;5.6064;5.4177 -;+;-;-;-;-;-;-;-;- + 2877 + 1 0.904 296871.4 1.0 11794 5715 17494 HBL1_DMSO_200M_050219_1,17511 HBL1_DMSO_200M_050219_1,17511,FLREYFERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17513 83.854 13.0 3647800.0 25 0 731500.0 + 18826 LASALWFLI 9 66 517.3058242851847 1032.597095637169 2 517.3063842654228 MULTI CID FTMS 0 0 0 17512 3426175.25 0.7518741028610353 2 -0.0925674438476562 1 Unmodified _LASALWFLI_ ENSG00000204006|ENST00000371759|C1orf185 36.04419817259434 0.0971720506436186 3 {I|L}AVD 4 7 61.23 0.0 0.0 5.9297 0.0 0.0 0.0 631.3601168268186 631.3601168268186 37.28978457299817 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.0 {I|L}AVD 5.9297 - 56 + 1 0.901 44207.0 1.0 11795 5716 17512 HBL1_DMSO_200M_050219_1,17513 HBL1_DMSO_200M_050219_1,17513,LASALWFLI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17514 83.855 18.0 3369300.0 25 0 489280.0 + 41465 VPLPNVPSI 9 76 468.2817208672013 934.5488888012028 2 468.2818176150322 MULTI CID FTMS 0 0 0 17512 3785507.0 0.9378014931466668 2 -0.0925674438476562 2 Unmodified _VPLPNVPSI_ ENSG00000101421|ENST00000217402|CHMP4B;nc|ENSG00000258469|P59074|CHMP4BP1 77.98433622928108 0.0180125044636492 3 [VP]N{I|L}PVPS{I|L} 9 2 + 64.179 0.0 0.0 6.8673 6.8673 85.017 0.0 0.0 0.0 4.101744650890495 24.26477176880759 4.101744650890495 4.101744650890495 0 1.1237125054200234 0.8538719643217619 0.3807196863200844 0.7742275032520141 [VP]N{I|L}PVPS{I|L};[{I|L}P]VNPVPS{I|L};[NP]V{I|L}PVPS{I|L};[VP]{I|L}NPVPS{I|L};[VP]N{I|L}PS[VP]{I|L};[{I|L}P][NP]VVPS{I|L};[VP]GG{I|L}PVPS{I|L};[VP]NV[{I|L}P]PS{I|L};[VP][QP]VVPS{I|L};[{I|L}P]VNPS[VP]{I|L} 6.8673;6.4284;6.2758;6.2231;5.2349;5.2;5.0536;5.0507;4.9946;4.796 -;-;-;-;-;-;-;-;-;- 361 1 0.901 50860.6 1.0 11796 5716 17512 HBL1_DMSO_200M_050219_1,17514 HBL1_DMSO_200M_050219_1,17514,VPLPNVPSI True True VPLPNVPSI 83.855188 468.281817615032 230205328.0 17512.0 ENSG00000101421|ENST00000217402|CHMP4B;;nc|ENSG00000258469|P59074|CHMP4BP1 4.866113026936849 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17515 83.856 22.0 2327800.0 25 0 243070.0 + 9803 FPAPILRAV 9 50 492.305379542449 982.596206151698 2 492.3056823611259 MULTI CID FTMS 0 0 0 17512 1866311.125 0.5729545673805122 -3 0.1351165771484375 3 Unmodified _FPAPILRAV_ chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161681590-161683167:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-11|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-14|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-4|FCRLA;nc|ENSG00000132185|Q7L513-5|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 34.10243960390752 0.1078313939113124 3 {I|L}PAPE 5 6 47.959 0.0 0.0 4.8808 0.0 0.0 457.30272109199376 0.0 457.30272109199376 0.0 36.17606355587169 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}PAPE 4.8808 - 70 1 0.901 46449.7 1.0 11797 5716 17512 HBL1_DMSO_200M_050219_1,17515 HBL1_DMSO_200M_050219_1,17515,FPAPILRAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17516 83.858 23.0 2240700.0 25 0 326070.0 45321 YSILQAEGIL 10 78 553.8082526999918 1105.6019524667836 2 553.8085204958916 MULTI CID FTMS 0 0 0 17512 1226204.5 0.0489551847310848 -5 0.2073135375976562 4 Unmodified _YSILQAEGIL_ ENSG00000145725|ENST00000358359|PPIP5K2;nc|ENSG00000145725|O43314-2|PPIP5K2 27.628801355627647 0.3479284626772844 3 {[VA]|[{I|L}G]}[YG][{I|L}T]CD{I|L} 9 8 32.61 0.0 0.0 2.9495 0.0 0.0 0.0 167.12014190236826 167.12014190236826 1.306423891230402 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}[YG][{I|L}T]CD{I|L} 2.9495 - 496 1 0.901 44295.9 1.0 11798 5716 17512 HBL1_DMSO_200M_050219_1,17516 HBL1_DMSO_200M_050219_1,17516,YSILQAEGIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17517 83.859 64.0 861140.0 25 0 174960.0 31778 RSKKKFQKN 9 67 388.5714107292959 1162.6924027880875 3 388.5712158083916 MULTI CID FTMS 0 0 0 17512 1207132.0 0.910649893027312 1 -0.0492324829101562 5 Unmodified _RSKKKFQKN_ ENST00000578730.1_1_4:1243983-1244322:+|nuORF 0.5247636613948944 0.8963649302248013 3 P 1 9 0.9691 0.0 0.0 0.08335 0.0 0.0 942.5607327214844 120.05095850162344 1062.6116912231078 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.08335 - 3 + 1 0.901 56264.6 1.0 11799 5716 17512 HBL1_DMSO_200M_050219_1,17517 HBL1_DMSO_200M_050219_1,17517,RSKKKFQKN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17518 83.861 72.0 3899600.0 25 0 827140.0 + -1 LSAMGFDAI 9 106 470.7263124699047 939.4380720066094 2 470.7262756228447 MULTI CID FTMS 0 0 0 17512 1135450.5 0.2332115774108258 -6 0.2350997924804687 6 Oxidation (M) _LSAM(Oxidation (M))GFDAI_ REV__ENSG00000160469|ENST00000309383|BRSK1;REV__ENSG00000174672|ENST00000528841|BRSK2;REV__ENST00000531078.1_1_11:1463684-1466535:+|nuORF;REV__nc|ENSG00000160469|Q8TDC3-2|BRSK1;REV__nc|ENSG00000160469|Q8TDC3-3|BRSK1;REV__nc|ENSG00000174672|Q8IWQ3-2|BRSK2;REV__nc|ENSG00000174672|Q8IWQ3-3|BRSK2;REV__nc|ENSG00000174672|Q8IWQ3-4|BRSK2;REV__nc|ENSG00000174672|Q8IWQ3-5|BRSK2;REV__nc|ENSG00000174672|Q8IWQ3-6|BRSK2 37.97399986684836 0.0865783450051559 3 {I|L}AS 3 -1 50.846 0.0 0.0 5.4124 0.0 0.0 0.0 665.2625849916425 665.2625849916425 34.58724340507789 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.6861818737241735 0.0 {I|L}AS 5.4124 - 182 + 1 0.901 218100.6 1.0 11800 5716 17512 HBL1_DMSO_200M_050219_1,17518 HBL1_DMSO_200M_050219_1,17518,LSAMGFDAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17519 83.865 226.0 816890.0 25 0 67338.0 + -1 DAFNSTFI 8 134 914.4333678459044 1826.852182758609 2 914.432177722454 MULTI CID FTMS 0 0 0 17512 640090.3125 0.7101393451830361 2 -0.0925674438476562 7 nc|ENSG00000167461|P61006-2|RAB8A;ENST00000588105.1_1_19:16222711-16223300:+|nuORF;ENST00000589697.1_1_19:16222732-16236504:+|nuORF;ENST00000590899.5_1_19:16222711-16232755:+|nuORF;ENST00000587156.5_1_19:16222711-16238468:+|nuORF;ENSG00000167461|ENST00000300935|RAB8A 3 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 97.049 0.0 0.0 5.3124 5.3124 56.741 0.0 0.0 0.0 6.584077216816056 14.929155219028942 6.584077216816056 0.0 0 0.0 0.9208187539523752 0.0 1.6237125054200234 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]QD[DP]VQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]QD[DP]VQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][DP]NEVQNA{M(Oxidation (M))|F}YKV{I|L};[YQ][DP]NEVQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]YYEVQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]YYEVQNA{M(Oxidation (M))|F}YKV{I|L};[YQ][DP]DVQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ][DP]DVQQNA{M(Oxidation (M))|F}YQV{I|L} 5.3124;5.3124;5.0695;5.0695;5.057;5.057;5.0459;5.0459;4.9582;4.9582 -;-;-;-;-;-;-;-;-;- 15758 1 0.901 123462.3 1.0 11801 5716 17512 HBL1_DMSO_200M_050219_1,17519 HBL1_DMSO_200M_050219_1,17519, False False DAFNSTFI 83.865063 914.432177722454 1061833.75 17512.0 nc|ENSG00000167461|P61006-2|RAB8A;;ENST00000588105.1_1_19:16222711-16223300:+|nuORF;;ENST00000589697.1_1_19:16222732-16236504:+|nuORF;;ENST00000590899.5_1_19:16222711-16232755:+|nuORF;;ENST00000587156.5_1_19:16222711-16238468:+|nuORF;;ENSG00000167461|ENST00000300935|RAB8A -0.1155866086483001 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17520 83.867 81.0 1715800.0 25 0 332310.0 -1 ALLETYCA 8 87 314.15321840409246 939.4378258124774 3 314.1526977419853 MULTI CID FTMS 0 0 0 17512 452775.5 0.1184334755893646 -6 0.2350997924804687 8 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 32.30548876998284 0.3644845974844379 3 A{I|L}{I|L}E 4 -1 60.054 0.0 0.0 6.3926 0.0 0.0 0.0 510.1696261041625 510.1696261041625 49.59666770732211 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.6694451763165201 0.0 A{I|L}{I|L}E 6.3926 + + 47 + 1 0.901 115134.6 1.0 11802 5716 17512 HBL1_DMSO_200M_050219_1,17520 HBL1_DMSO_200M_050219_1,17520,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17521 83.872 274.0 765070.0 25 0 69236.0 -1 MTVSPAHCLQ 10 150 593.2713404877796 1184.5281280423592 2 593.2722045779228 MULTI CID FTMS 0 0 0 17512 381350.6875 0.3127000495678089 4 -0.2871551513671875 9 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))MTVSPAHC(Carbamidomethyl (C))LQ_ ENST00000600584.5_1_19:4094554-4095145:-|nuORF 13.90604991867851 0.6142120002215601 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VD{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]C(Carbamidomethyl (C)){I|L} 9 -1 + 25.864 0.0 0.0 2.1835 2.1835 71.626 0.0 0.0 0.0 3.5218251811136305 3.5218251811136305 3.5218251811136305 3.5218251811136305 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VD{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]C(Carbamidomethyl (C)){I|L};[AG]Y[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}DV[Q{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VD{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]GC{I|L};[YQ][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}DV[Q{I|L}];[W{I|L}][DG][HC]DV[Q{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VD{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]AAM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}DV[Q{I|L}];[W{I|L}][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]T{I|L}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[W{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}[HT]A[C(Carbamidomethyl (C))N];[W{I|L}][RH]{[WN]|[YH]}[C(Carbamidomethyl (C))N] 2.1835;1.8861;1.7184;1.6208;1.4119;1.1088;0.89781;0.82641;0.7446;0.6005 -;-;-;-;-;-;-;-;-;- 1104 + 1 0.901 159469.7 1.0 11803 5716 17512 HBL1_DMSO_200M_050219_1,17521 HBL1_DMSO_200M_050219_1,17521,MTVSPAHCLQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17522 83.877 275.0 140390.0 25 0 13174.0 -1 0 78 680.9611365372184 2039.8615802118552 3 681.2946044802666 MULTI CID FTMS 0 0 0 17512 374071.375 1.0 0 0.0 10 3 {[QN]|[E{I|L}]|[KN]}N 3 -1 22.976 0.0 0.0 1.1264 0.0 0.0 0.0 1680.6681219433297 1680.6681219433297 10.65675328855981 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.1549471895720985 0.0 {[QN]|[E{I|L}]|[KN]}N 1.1264 - 121 1 0.901 46811.2 1.0 11804 5716 17512 HBL1_DMSO_200M_050219_1,17522 HBL1_DMSO_200M_050219_1,17522, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17523 83.882 279.0 466190.0 25 0 60660.0 + 3723 DAFRQPSLFY 10 126 622.308660861823 1242.602768790446 2 622.3082763552666 MULTI CID FTMS 0 0 0 17512 324692.3125 0.1520617630309291 -5 0.2073135375976562 11 Unmodified _DAFRQPSLFY_ ENSG00000197442|ENST00000359015|MAP3K5 61.60191391372663 0.0323840705564037 3 {[TV]|[{I|L}S]}MASQ[PS]{I|L}{M(Oxidation (M))|F}Y 11 5 + 66.294 0.0 0.0 5.3351 5.3351 87.679 0.0 0.0 0.0 9.33031053618084 53.46350908413835 9.33031053618084 14.412271429879794 0 1.0 0.6989700043360187 1.1861818737241734 0.5283773187068795 {[TV]|[{I|L}S]}MASQ[PS]{I|L}{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}MAS[AG][PS]{I|L}{M(Oxidation (M))|F}Y;[VG][W{M(Oxidation (M))|F}]Q[PS]{I|L}{M(Oxidation (M))|F}Y;[PS]{I|L}{[WN]|[YH]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{M(Oxidation (M))|F}Y;[PS]{M(Oxidation (M))|F}ASQKK{[MG]|[TS]}Y;{[TV]|[{I|L}S]}P{[WN]|[YH]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{M(Oxidation (M))|F}Y;[{I|L}T][Q{I|L}][WC(Carbamidomethyl (C))]{I|L}{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}MASQKK{[MG]|[TS]}Y;[VG][W{M(Oxidation (M))|F}]QR[C(Carbamidomethyl (C))K]Y;[DP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[WK]{M(Oxidation (M))|F}Y 5.3351;4.1753;3.8415;2.8597;2.7541;2.6063;2.5623;2.5006;1.9266;1.4252 -;-;-;-;-;-;-;-;-;- 912 1 0.901 96925.2 1.0 11805 5716 17512 HBL1_DMSO_200M_050219_1,17523 HBL1_DMSO_200M_050219_1,17523,DAFRQPSLFY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17524 83.888 299.0 476690.0 25 0 21958.0 + + -1 VQLEPFPEKL 10 166 600.2671530547594 1198.5197531763188 2 600.2698852419853 MULTI CID FTMS 0 0 0 17512 265451.71875 0.313192330347633 3 -0.167449951171875 12 Carbamidomethyl (C) _YSLC(Carbamidomethyl (C))CPLCIQ_ nc|ENSG00000114956|Q16854-2|DGUOK;nc|ENSG00000114956|Q16854-4|DGUOK;ENSG00000114956|ENST00000264093|DGUOK;ENST00000493055.1_1_2:74154037-74174034:+|nuORF;nc|ENSG00000114956|Q16854-3|DGUOK;nc|ENSG00000114956|Q16854-5|DGUOK;ENST00000462685.1_1_2:74173872-74185284:+|nuORF 26.268140514670165 0.3785003716575977 3 YQAPDGY{I|L}C(Carbamidomethyl (C)){I|L} 10 -1 + 30.979 0.0 0.0 2.5848 2.5848 67.469 0.0 0.0 0.0 2.615166698372136 2.8736579091053827 2.615166698372136 0.7795501485934864 0 0.6237125054200234 0.0 0.0 0.3252574989159953 YQAPDGY{I|L}C(Carbamidomethyl (C)){I|L};YQAPD[YV]CQ{I|L};YQAPD[YV]AC(Carbamidomethyl (C)){I|L};{I|L}QYP{[MG]|[TS]}{M(Oxidation (M))|F}AC(Carbamidomethyl (C)){I|L};YQAPD[YV]C{I|L}Q;YQ{I|L}P{[MG]|[TS]}{M(Oxidation (M))|F}CQ{I|L};YQ{I|L}P{[MG]|[TS]}{M(Oxidation (M))|F}AC(Carbamidomethyl (C)){I|L};{I|L}[WM]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}AC(Carbamidomethyl (C)){I|L};YQ{I|L}P{[MG]|[TS]}{M(Oxidation (M))|F}C{I|L}Q;{I|L}[WC(Carbamidomethyl (C))]D[YV]AC(Carbamidomethyl (C)){I|L} 2.5848;2.5198;2.5007;2.3666;2.345;2.291;2.2719;2.2681;2.1162;2.0988 -;-;-;-;-;-;-;-;-;- 1758 + 1 0.901 103530.9 1.0 11806 5716 17512 HBL1_DMSO_200M_050219_1,17524 HBL1_DMSO_200M_050219_1,17524,YSLCCPLCIQ False False VQLEPFPEKL 83.887684 600.269885241985 963521.5625 17512.0 nc|ENSG00000114956|Q16854-2|DGUOK;;nc|ENSG00000114956|Q16854-4|DGUOK;;ENSG00000114956|ENST00000264093|DGUOK;;ENST00000493055.1_1_2:74154037-74174034:+|nuORF;;nc|ENSG00000114956|Q16854-3|DGUOK;;nc|ENSG00000114956|Q16854-5|DGUOK;;ENST00000462685.1_1_2:74173872-74185284:+|nuORF 1.2772784506281216 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17525 83.893 302.0 270330.0 25 0 84471.0 -1 0 98 739.3627475096896 2215.0664131292688 3 739.6967651247978 MULTI CID FTMS 0 0 0 17512 236633.46875 0.4243487555683974 7 -0.5404891967773438 13 3 {[TV]|[{I|L}S]}[DN]{I|L}Y{I|L}E[QA]YY{I|L} 13 -1 46.758 0.0 0.0 2.1109 0.0 0.0 0.0 626.2822839473225 626.2822839473225 29.22231968193824 0.0 0.0 0.0 0 0.0 2.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}[DN]{I|L}Y{I|L}E[QA]YY{I|L} 2.1109 - 2753 1 0.901 66105.9 1.0 11807 5716 17512 HBL1_DMSO_200M_050219_1,17525 HBL1_DMSO_200M_050219_1,17525, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17526 83.899 324.0 167950.0 25 0 41564.0 -1 0 74 1107.5387639795777 0 1107.209399402142 PEAK CID FTMS 0 0 0 17512 88559.890625 0.4842711892617133 -3 0.1351165771484375 14 3 YS{I|L}YSQ{I|L} 7 -1 41.68 0.0 0.0 1.8833 0.0 0.0 1124.5291137972429 231.0779207818969 1355.6070345791395 0.0 0.0 0.0 0.0 0 0.0 0.0 1.424742501084005 0.2887254899964357 YS{I|L}YSQ{I|L} 1.8833 - 1444 + 1 0.901 43729.2 1.0 11808 5716 17512 HBL1_DMSO_200M_050219_1,17526 HBL1_DMSO_200M_050219_1,17526, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17528 83.903 4.8 9660600.0 25 0 2343800.0 + 41855 VPYLVGQVV 9 58 487.289371931678 972.564190930156 2 487.2895995974541 MULTI CID FTMS 0 0 0 17527 11257660.0 0.5976580948433152 3 -0.2379226684570312 1 Unmodified _VPYLVGQVV_ ENSG00000126088|ENST00000246337|UROD;ENST00000494399.5_1_1:45478966-45479784:+|nuORF 34.18733598223924 0.1073653526364521 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV 9 2 + 42.285 0.0 0.0 4.3478 4.3478 74.899 0.0 0.0 0.0 5.642492736872597 26.800690552576683 5.642492736872597 3.010299956639805 0 0.8182503180159344 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}VGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGVQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GQVVV;[VP]Y{I|L}VGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GVQVV;[VP]Y{I|L}GQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVG[AG]VV;[VP]Y{I|L}GVQVV 4.3478;4.0383;4.0383;3.8572;3.7288;3.7288;3.5477;3.4192;3.401;3.2382 -;-;-;-;-;+;-;-;-;- + 354 1 0.901 42172.2 1.0 11809 5717 17527 HBL1_DMSO_200M_050219_1,17528 HBL1_DMSO_200M_050219_1,17528,VPYLVGQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17529 83.909 291.0 720900.0 25 0 90148.0 + 1253 AILEKMPLV 9 176 507.3076684136869 1012.6007838941738 2 507.3083068728447 MULTI CID FTMS 0 0 0 17527 488102.0625 0.5426215564145884 3 -0.2379226684570312 2 Unmodified _AILEKMPLV_ ENSG00000213983|ENST00000397120|AP1G2;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF 49.93300154707207 0.0405168250806675 3 VEVVKMPV{I|L} 9 6 + 49.24 0.0 0.0 4.8627 4.8627 73.299 0.0 0.0 0.0 0.8564012544885813 2.168594368934187 0.8564012544885813 0.8564012544885813 0 1.552887198244136 0.9208187539523752 0.0 0.0 VEVVKMPV{I|L};[{I|L}A][VS]MPAV{I|L}{I|L};VEVVKM{I|L}PV;[{I|L}A]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}PAV{I|L}{I|L};VEVVKMP{I|L}V;{[QN]|[E{I|L}]|[KN]}KMPAV{I|L}{I|L};[{I|L}A][VS]MP{I|L}AV{I|L};VVVEKMPV{I|L};[{I|L}A]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}P{I|L}AV{I|L};[{I|L}A]{I|L}[WD]AV{I|L}{I|L} 4.8627;4.7781;4.6486;4.6168;4.1542;4.0719;3.8912;3.7712;3.7298;3.6505 -;-;-;-;-;-;-;-;-;- 5780 + 1 0.901 163797.1 1.0 11810 5717 17527 HBL1_DMSO_200M_050219_1,17529 HBL1_DMSO_200M_050219_1,17529,AILEKMPLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17530 83.914 269.0 817980.0 25 0 86805.0 35339 STCWCRSL 8 182 478.2091679885692 954.4037830439383 2 478.7110473513603 MULTI CID FTMS 0 0 0 17527 688132.5625 0.4272603960897062 31 -2.8655929565429688 3 Unmodified _STCWCRSL_ ENSG00000180694|ENST00000458549|TMEM64;nc|ENSG00000180694|Q6YI46-4|TMEM64 18.13498045792455 0.6430038125133779 3 [{I|L}P]YVV 5 8 22.703 0.0 0.0 2.3788 0.0 0.0 0.0 380.0428287824939 380.0428287824939 0.0269751594335332 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [{I|L}P]YVV 2.3788 - 462 1 0.901 167872.2 1.0 11811 5717 17527 HBL1_DMSO_200M_050219_1,17530 HBL1_DMSO_200M_050219_1,17530,STCWCRSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17531 83.918 267.0 861180.0 25 0 170070.0 + 9684 FLREYFERL 9 123 636.8405749224725 1271.6665969117448 2 636.8405029177666 MULTI CID FTMS 0 0 0 17527 508969.625 0.6019562528204524 -2 0.0969772338867187 4 Unmodified _FLREYFERL_ ENSG00000108946|ENST00000589228|PRKAR1A;ENST00000592194.1_1_17:66508623-66511738:+|nuORF;nc|ENSG00000108946|P10644-2|PRKAR1A 75.5705956163825 0.0189455680524554 3 {I|L}{M(Oxidation (M))|F}REY[W{I|L}]{M(Oxidation (M))|F}V 9 6 + 66.635 0.0 0.0 5.24 5.24 75.471 0.0 0.0 0.0 14.884381005764311 1.3772686722014529 1.3772686722014529 1.3772686722014529 0 1.5994850021680094 0.0 0.7302046884880937 0.3494850021680094 {I|L}{M(Oxidation (M))|F}REY[W{I|L}]{M(Oxidation (M))|F}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REY{M(Oxidation (M))|F}ER{I|L};{I|L}{M(Oxidation (M))|F}R{M(Oxidation (M))|F}YEVVS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REYE{M(Oxidation (M))|F}R{I|L};{I|L}{M(Oxidation (M))|F}RE{I|L}[WY]{M(Oxidation (M))|F}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REY{M(Oxidation (M))|F}RE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REY{M(Oxidation (M))|F}E[VG]{I|L};{I|L}{M(Oxidation (M))|F}R{M(Oxidation (M))|F}YE[W{I|L}]V;{I|L}{M(Oxidation (M))|F}R{M(Oxidation (M))|F}YEVVTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R{M(Oxidation (M))|F}YEER{I|L} 5.24;5.1317;4.7064;4.6727;4.5308;4.5038;4.4075;4.3142;4.2741;4.2435 -;+;-;-;-;-;-;-;-;- + 1510 + 1 0.901 168445.8 1.0 11812 5717 17527 HBL1_DMSO_200M_050219_1,17531 HBL1_DMSO_200M_050219_1,17531,FLREYFERL True True FLREYFERL 83.91849 636.840502917767 69122741.0 17527.0 ENST00000592194.1_1_17:66508623-66511738:+|nuORF;;ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 4.441442330678304 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17532 83.925 357.0 811920.0 25 0 63265.0 + 18860 LASQHEEL 8 234 309.490381674979 925.449315625137 3 309.4900695681572 MULTI CID FTMS 0 0 0 17527 508148.21875 1.0 0 0.0 5 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 3 [{I|L}A]P 3 -1 19.922 0.0 0.0 2.1526 0.0 0.0 0.0 641.252024935937 641.252024935937 0.4575749056067515 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A]P 2.1526 - 231 1 0.901 229504.3 1.0 11813 5717 17527 HBL1_DMSO_200M_050219_1,17532 HBL1_DMSO_200M_050219_1,17532,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17533 83.931 313.0 425290.0 25 0 23846.0 28860 QAIPTVQHHL 10 156 572.315987383451 0 572.3164550662041 PEAK CID FTMS 0 0 0 17527 346919.84375 0.962522485217002 2 -0.1182174682617187 6 Unmodified _QAIPTVQHHL_ ENST00000515455.2_1_16:30108011-30108224:+|nuORF 22.736283301280096 0.276231959287006 3 {I|L}{M(Oxidation (M))|F}VK{I|L}D 6 8 27.033 0.0 0.0 2.3659 0.0 0.0 199.09619595758824 225.08881555728752 424.1850115148758 0.0 0.0 0.0 0.0 0 0.7396518287104438 0.0 0.9247425010840048 0.0 {I|L}{M(Oxidation (M))|F}VK{I|L}D 2.3659 - 749 + 1 0.901 106955.6 1.0 11814 5717 17527 HBL1_DMSO_200M_050219_1,17533 HBL1_DMSO_200M_050219_1,17533,QAIPTVQHHL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17534 83.936 313.0 202520.0 25 0 16090.0 24534 MKCGGGLL 8 73 778.3980253794376 777.3907489128376 1 778.3981811404228 MULTI CID FTMS 0 0 0 17527 339393.71875 1.0 0 0.0 7 Unmodified _MKCGGGLL_ ENSG00000198420|ENST00000479870|TCAF1;nc|ENSG00000198420|Q9Y4C2-2|TCAF1 5.760428011301431 0.7893668129297577 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F}E{I|L} 6 6 + 63.956 0.0 0.0 8.2271 8.2271 83.072 0.0 0.0 0.0 0.9645289853159014 13.673598213162862 0.9645289853159014 0.9645289853159014 0 0.7887254899964358 0.0 1.2666281780378237 0.975772496747986 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F}E{I|L};[Q{I|L}]E{M(Oxidation (M))|F}E{I|L};[{M(Oxidation (M))|F}E]{I|L}QE{I|L};{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}QE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EQE{I|L};[{M(Oxidation (M))|F}E]{I|L}[AG]E{I|L};[Q{I|L}]{M(Oxidation (M))|F}EE{I|L};{[QN]|[E{I|L}]|[KN]}[AG]{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[AG]E{I|L} 8.2271;8.103;7.9629;7.4892;6.8651;6.4953;6.3327;6.2892;6.2775;5.6533 -;-;-;-;-;-;-;-;-;- 295 1 0.901 49734.8 1.0 11815 5717 17527 HBL1_DMSO_200M_050219_1,17534 HBL1_DMSO_200M_050219_1,17534,MKCGGGLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17535 83.942 334.0 250680.0 25 0 59105.0 -1 0 100 951.953606745196 1901.892660557192 2 952.4571411013604 MULTI CID FTMS 0 0 0 17527 215193.96875 0.8344741873967163 3 -0.2379226684570312 8 3 A{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 4 -1 24.412 0.0 0.0 1.2836 0.0 0.0 1392.66412769762 0.0 1392.66412769762 0.0 2.54554718523508 0.0 0.0 0 0.0 0.0 0.0 0.0 A{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 1.2836 - 1350 + 1 0.901 60999.4 1.0 11816 5717 17527 HBL1_DMSO_200M_050219_1,17535 HBL1_DMSO_200M_050219_1,17535, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17537 83.951 388.0 315210.0 25 0 17038.0 + 17912 KQVEDDIQQLL 11 159 664.8570340670444 1327.6995152008888 2 664.8588134646416 MULTI CID FTMS 0 0 0 17536 309599.8125 0.2865415291109155 -3 0.1403121948242187 1 Unmodified _KQVEDDIQQLL_ ENSG00000161057|ENST00000292644|PSMC2;ENST00000460021.1_1_7:102994369-103002536:+|nuORF 69.33821966488729 0.0343223916712224 3 EQQYMV{I|L}CS{I|L} 10 8 86.234 0.0 0.0 6.495 0.0 0.0 115.11841276123876 0.0 115.11841276123876 0.0 57.4474620486 0.0 0.0 0 1.110924374808178 0.0 2.1025684359364405 0.6989700043360187 EQQYMV{I|L}CS{I|L} 6.495 - 9682 + 1 0.901 100171.2 1.0 11817 5718 17536 HBL1_DMSO_200M_050219_1,17537 HBL1_DMSO_200M_050219_1,17537,KQVEDDIQQLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17538 83.953 42.0 2087100.0 25 0 575520.0 + 23270 LSWLTLLLR 9 78 557.8503559949683 1113.6861590567364 2 557.8511230349541 MULTI CID FTMS 0 0 0 17536 982529.9375 0.0241250127557885 -3 0.1403121948242187 2 Unmodified _LSWLTLLLR_ REV__ENST00000483825.5_1_1:167404074-167487702:-|nuORF 21.53697664764585 0.2571576504437394 3 [{I|L}T]{I|L}[DG]T{I|L}{I|L} 8 -1 37.893 0.0 0.0 3.4024 0.0 0.0 0.0 284.17490352378644 284.17490352378644 25.128377699402016 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]{I|L}[DG]T{I|L}{I|L} 3.4024 - 148 1 0.901 73977.5 1.0 11818 5718 17536 HBL1_DMSO_200M_050219_1,17538 HBL1_DMSO_200M_050219_1,17538,LSWLTLLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17539 83.954 82.0 1104500.0 25 0 108360.0 + 18312 KVLDLKINL 9 113 528.3447695415001 1054.6749861498 2 528.3449584841728 MULTI CID FTMS 0 0 0 17536 916457.4375 0.336383876975785 12 -1.1428604125976562 3 Unmodified _KVLDLKINL_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 15.738622578938676 0.4106572216562794 3 A{I|L}DK{I|L}R{I|L}{I|L} 8 5 36.299 0.0 0.0 3.4417 0.0 0.0 114.06941586555224 0.0 114.06941586555224 0.0 9.503544739031751 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 A{I|L}DK{I|L}R{I|L}{I|L} 3.4417 - 795 + 1 0.901 75574.8 1.0 11819 5718 17536 HBL1_DMSO_200M_050219_1,17539 HBL1_DMSO_200M_050219_1,17539,KVLDLKINL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17540 83.96 318.0 478980.0 25 0 41265.0 + 2286 AQIDDDVFDKI 11 152 639.8141284874744 1277.6137040417486 2 639.8148681521416 MULTI CID FTMS 0 0 0 17536 378857.5625 0.5308785042374584 -3 0.1403121948242187 4 Unmodified _AQIDDDVFDKI_ ENSG00000109805|ENST00000251496|NCAPG;ENST00000513226.1_1_4:17812700-17814869:+|nuORF 57.10758569107544 0.0808838796364293 3 [QA]{I|L}DDDV{M(Oxidation (M))|F}DK{I|L} 11 0 [QA] + + 67.965 17.172 8.6249 5.3197 5.3197 56.786 0.0 0.0 0.0 0.0 26.59334312121146 0.0 0.0 0 0.9247425010840048 0.0 1.5629529932484498 0.1307196863200844 + + [QA]{I|L}DDDV{M(Oxidation (M))|F}DK{I|L} 5.3197 + + 3362 + 1 0.901 117534.9 1.0 11820 5718 17536 HBL1_DMSO_200M_050219_1,17540 HBL1_DMSO_200M_050219_1,17540,AQIDDDVFDKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17541 83.967 377.0 246170.0 25 0 16900.0 -1 0 107 997.4474370078892 1992.880321082578 2 997.4527465701104 MULTI CID FTMS 0 0 0 17536 258441.15625 0.7804559421394949 -1 0.0433349609375 5 3 [TA]{I|L}D{I|L}{I|L}TA 8 -1 79.026 0.0 0.0 3.9654 0.0 0.0 0.0 1191.389024045722 1191.389024045722 43.610220819274005 0.0 0.0 0.0 0 2.0 1.6989700043360187 1.4436726795685342 0.0 [TA]{I|L}D{I|L}{I|L}TA 3.9654 - 3211 1 0.901 66916.3 1.0 11821 5718 17536 HBL1_DMSO_200M_050219_1,17541 HBL1_DMSO_200M_050219_1,17541, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17542 83.974 381.0 158690.0 25 0 8563.6 -1 SDCCLCCCCCG 11 106 670.6730936292731 0 670.6741210818291 PEAK CID FTMS 0 0 0 17536 245904.234375 1.0 0 0.0 6 4 Carbamidomethyl (C) _SDC(Carbamidomethyl (C))C(Carbamidomethyl (C))LC(Carbamidomethyl (C))C(Carbamidomethyl (C))CCCG_ ENSG00000138650|ENST00000264360|PCDH10;nc|ENSG00000138650|Q9P2E7-2|PCDH10 0.0 0.4761840153648598 3 AQQT 4 -1 9.2082 0.0 0.0 0.68752 0.0 0.0 669.9867547704441 238.11994348697505 908.1066982574192 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3252574989159953 AQQT 0.68752 - 52 + 1 0.901 57995.8 1.0 11822 5718 17536 HBL1_DMSO_200M_050219_1,17542 HBL1_DMSO_200M_050219_1,17542,SDCCLCCCCCG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17543 83.981 398.0 129600.0 25 0 11164.0 8774 EVTEKRLPLWL 11 109 692.400881174131 1382.787209415062 2 692.9076415896416 MULTI CID FTMS 0 0 0 17536 204427.515625 0.7488421398699845 -4 0.1814956665039062 7 Unmodified _EVTEKRLPLWL_ ENST00000575234.1_1_16:3355499-3356027:+|nuORF 2.498486711656943 0.8633599123570009 3 {I|L} 1 10 10.969 0.0 0.0 0.79326 0.0 0.0 1251.6921909597868 0.0 1251.6921909597868 0.0 1.136218907515314 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.79326 + + 89 + 1 0.901 46770.0 1.0 11823 5718 17536 HBL1_DMSO_200M_050219_1,17543 HBL1_DMSO_200M_050219_1,17543,EVTEKRLPLWL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17544 83.988 404.0 271610.0 25 0 33443.0 + 30088 QVEKKLFSPIY 11 135 676.3875549242252 1350.7605569152504 2 676.3878661990166 MULTI CID FTMS 0 0 0 17536 160990.515625 0.4394781520765883 -1 0.0433349609375 8 Unmodified _QVEKKLFSPIY_ REV__ENSG00000111837|ENST00000354489|MAK;REV__nc|ENSG00000111837|P20794|MAK 8.155526934196011 0.8366696279279818 3 {I|L} 1 -1 11.594 0.0 0.0 0.85832 0.0 0.0 1219.6653858720847 0.0 1219.6653858720847 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.85832 + + 163 + 1 0.901 89135.1 1.0 11824 5718 17536 HBL1_DMSO_200M_050219_1,17544 HBL1_DMSO_200M_050219_1,17544,QVEKKLFSPIY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17545 83.996 416.0 208630.0 25 0 18304.0 -1 YVYYTDFVMEL 11 125 729.8284451979761 0 729.8897582888603 PEAK CID FTMS 0 0 0 -1 0 9 Oxidation (M) _YVYYTDFVM(Oxidation (M))EL_ ENSG00000159461|ENST00000290649|AMFR 3.5964929083625545 0.4761840153648598 3 V{I|L}P 3 -1 13.812 0.0 0.0 0.94758 0.0 0.0 726.1839826634128 419.2307222955688 1145.4147049589817 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}P 0.94758 - 72 + 1 0.901 67323.9 1.0 11825 5718 17536 HBL1_DMSO_200M_050219_1,17545 HBL1_DMSO_200M_050219_1,17545,YVYYTDFVMEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17546 84.005 522.0 423590.0 25 0 42408.0 + 12684 GVLPNIQAV 9 171 455.7710917745954 0 455.7713500857353 PEAK CID FTMS 0 0 0 17536 142195.25 0.7932113179333212 2 -0.1945877075195312 10 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 24.67388899826682 0.1587009629985955 3 E{I|L}{M(Oxidation (M))|F}H 4 8 15.706 0.0 0.0 1.7268 0.0 0.0 96.07739147282798 284.1731356256469 380.2505270984749 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 E{I|L}{M(Oxidation (M))|F}H 1.7268 - 701 + 1 0.901 169008.4 1.0 11826 5718 17536 HBL1_DMSO_200M_050219_1,17546 HBL1_DMSO_200M_050219_1,17546,GVLPNIQAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17547 84.009 157.0 500600.0 25 0 71559.0 + 15061 IMEELGISL 9 128 502.76952805994034 0 502.7686340212822 PEAK CID FTMS 0 0 0 17536 123183.0 0.427525305932537 3 -0.2321243286132812 11 Unmodified _IMEELGISL_ ENSG00000171189|ENST00000327783|GRIK1;nc|ENSG00000171189|P39086-2|GRIK1 21.53697664764585 0.1871382778112851 3 {M(Oxidation (M))|F}TT 3 8 11.203 0.0 0.0 1.1163 0.0 0.0 331.2146409814057 320.12510095767817 651.3397419390839 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.0 {M(Oxidation (M))|F}TT 1.1163 - 67 + 1 0.901 62085.1 1.0 11827 5718 17536 HBL1_DMSO_200M_050219_1,17547 HBL1_DMSO_200M_050219_1,17547,IMEELGISL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17548 84.017 465.0 91024.0 25 0 6754.9 15554 IPWWTQLRKSL 11 99 714.4137451052666 0 714.4137451052666 PEAK CID FTMS 0 0 0 -1 0 12 Unmodified _IPWWTQLRKSL_ ENST00000292894.1_1_19:36525925-36526174:-|nuORF 3.2813086475875832 0.4761840153648598 3 {I|L} 1 10 3.9794 0.0 0.0 0.2789 0.0 0.0 794.4243397204956 516.2834566705686 1310.7077963910642 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.2789 + + 49 + 1 0.901 36712.5 1.0 11828 5718 17536 HBL1_DMSO_200M_050219_1,17548 HBL1_DMSO_200M_050219_1,17548,IPWWTQLRKSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17550 84.021 3.1 16675000.0 25 0 2552000.0 -1 ALMAAPLSL 9 66 451.7527689299804 901.4909849267608 2 451.7529785037041 MULTI CID FTMS 0 0 0 17549 16910526.0 0.2158454311934249 33 -3.1533279418945312 1 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 57.814 0.0 0.0 6.4132 6.4132 79.979 0.0 0.0 0.0 8.208705367622429 8.384767769392738 8.208705367622429 1.7609125905568137 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};{[TV]|[{I|L}S]}[RD]D{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}[W{I|L}]A{I|L} 6.4132;6.2178;5.5026;4.9465;4.6671;4.6164;4.2825;2.4564;2.3157 -;-;-;-;-;-;-;-;- 128 1 0.904 45219.2 1.0 11829 5719 17549 HBL1_DMSO_200M_050219_1,17550 HBL1_DMSO_200M_050219_1,17550,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17551 84.023 5.4 5508800.0 25 0 341930.0 + 45123 YQAPDIDVQL 10 60 581.2920547809874 1160.5695566287748 2 581.2933837771416 MULTI CID FTMS 0 0 0 17549 7442004.5 0.1899082699208857 8 -0.77386474609375 2 Unmodified _YQAPDIDVQL_ ENSG00000105373|ENST00000246802|NOP53;ENST00000600410.5_1_19:48257983-48259211:+|nuORF 19.361941925380144 0.5226674314761524 3 D{I|L}[DP]CQ{I|L} 7 6 24.512 0.0 0.0 2.1121 0.0 0.0 358.218779297042 0.0 358.218779297042 0.0 11.324864297275283 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 D{I|L}[DP]CQ{I|L} 2.1121 - 112 + 1 0.904 30817.1 1.0 11830 5719 17549 HBL1_DMSO_200M_050219_1,17551 HBL1_DMSO_200M_050219_1,17551,YQAPDIDVQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17552 84.024 3.6 16965000.0 25 0 2256900.0 + 9876 FPFLVQSK 8 73 483.2764472907161 964.5383416482322 2 483.2766601443291 MULTI CID FTMS 0 0 0 17549 14770700.0 0.9790954792922504 5 -0.4703292846679687 3 Unmodified _FPFLVQSK_ REV__ENSG00000254221|ENST00000523390|PCDHGB1;REV__nc|ENSG00000254221|Q9Y5G3-2|PCDHGB1 36.04419817259434 0.3004715606373109 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}{M(Oxidation (M))|F}VP{M(Oxidation (M))|F} 8 -1 + 40.315 0.0 0.0 4.1798 4.1798 71.903 0.0 0.0 0.0 1.278813061184522 1.278813061184522 1.278813061184522 1.278813061184522 0 0.7742275032520141 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}{M(Oxidation (M))|F}VP{M(Oxidation (M))|F};[KG]{I|L}[HS]VVPE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}V{M(Oxidation (M))|F}P{M(Oxidation (M))|F};[KG]{M(Oxidation (M))|F}{I|L}GTVP{M(Oxidation (M))|F};{M(Oxidation (M))|F}[{I|L}T]TG{I|L}[WK];[KG]{I|L}{M(Oxidation (M))|F}GTVP{M(Oxidation (M))|F};[KG]{I|L}[HS]VPVE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}{M(Oxidation (M))|F}[KS]Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]{I|L}[Y{I|L}]Q;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[{I|L}P][{M(Oxidation (M))|F}V]V 4.1798;4.0472;3.9972;3.6071;3.1748;3.1124;2.9324;2.86;2.7582;2.2907 -;-;-;-;-;-;-;-;-;- 580 1 0.904 53551.9 1.0 11831 5719 17549 HBL1_DMSO_200M_050219_1,17552 HBL1_DMSO_200M_050219_1,17552,FPFLVQSK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17553 84.025 24.0 1696400.0 25 0 252560.0 + 17884 KQMEQISQFL 10 74 626.3237001870148 1250.6328474408294 2 626.3244506716728 MULTI CID FTMS 0 0 0 17549 2071124.75 0.2123577104480672 8 -0.77386474609375 4 Unmodified _KQMEQISQFL_ ENSG00000144834|ENST00000478951|TAGLN3;ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 47.594388314883695 0.0942698883389255 3 {[SA]|[TG]}G{M(Oxidation (M))|F}[PG]Q{I|L}SQ{M(Oxidation (M))|F}{I|L} 12 5 + 77.354 0.0 0.0 6.1852 6.1852 81.968 0.0 0.0 0.0 3.364875295848435 16.61181443446619 3.364875295848435 3.364875295848435 0 0.5 1.0969100130080565 1.1989700043360187 0.7614393726401688 {[SA]|[TG]}G{M(Oxidation (M))|F}[PG]Q{I|L}SQ{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}C(Carbamidomethyl (C))KQ{I|L}SQ{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MKQ{I|L}SQ{M(Oxidation (M))|F}{I|L};{[SA]|[TG]}{I|L}[MN]Q{I|L}SQ{M(Oxidation (M))|F}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}[PG]Q{I|L}SQ{M(Oxidation (M))|F}{I|L};{[SA]|[TG]}G{M(Oxidation (M))|F}[PG]Q{I|L}S[AG]{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[CG]KQ{I|L}SQ{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}C(Carbamidomethyl (C))K[AG]{I|L}SQ{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}C(Carbamidomethyl (C))KQ{I|L}S[AG]{M(Oxidation (M))|F}{I|L};{[SA]|[TG]}G{M(Oxidation (M))|F}[PG][AG]{I|L}SQ{M(Oxidation (M))|F}{I|L} 6.1852;5.9162;5.8529;5.5157;5.5016;5.4577;5.1834;5.1834;5.1834;5.1533 -;-;-;-;-;-;-;-;-;- 388 1 0.904 39672.4 1.0 11832 5719 17549 HBL1_DMSO_200M_050219_1,17553 HBL1_DMSO_200M_050219_1,17553,KQMEQISQFL True True KQMEQISQFL 84.024997 626.324450671673 286598472.0 17549.0 ENSG00000158710|ENST00000368097|TAGLN2;;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;;nc|ENSG00000158710|P37802-2|TAGLN2;;ENSG00000144834|ENST00000478951|TAGLN3 6.61298402150472 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17554 84.026 27.0 2293100.0 25 0 455610.0 + 20375 LLGPRLVLA 9 74 476.32097924230936 950.6274055514187 2 476.3210937380791 MULTI CID FTMS 0 0 0 17549 2033646.375 0.0808106300351511 10 -0.9362335205078124 5 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 46.020951573049366 0.0490941689151868 3 {I|L}{I|L}G 3 6 47.619 0.0 0.0 5.0093 0.0 0.0 0.0 664.4163912408811 664.4163912408811 17.45445281476492 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}{I|L}G 5.0093 + + 46 + 1 0.904 52127.6 1.0 11833 5719 17549 HBL1_DMSO_200M_050219_1,17554 HBL1_DMSO_200M_050219_1,17554,LLGPRLVLA True True LLGPRLVLA 84.026176 476.321093738079 396148800.0 17549.0 ENSG00000170348|ENST00000303575|TMED10 3.6955646673838296 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17555 84.027 25.0 1626600.0 25 0 121110.0 + 15353 IPMELVNEV 9 89 522.2760265532625 1042.5375001733248 2 522.2758666872978 MULTI CID FTMS 0 0 0 17549 1266136.875 0.6523985582571505 -2 0.1182174682617187 6 Unmodified _IPMELVNEV_ ENSG00000108773|ENST00000225916|KAT2A;nc|ENSG00000108773|Q92830-2|KAT2A 20.453626601364224 0.2830276176381075 3 {[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}{I|L}VNEV 9 4 + 41.533 0.0 0.0 3.9838 3.9838 71.991 0.0 0.0 0.0 1.7609125905568064 8.706290716515916 1.7609125905568064 1.7609125905568064 0 0.718765315847925 0.0 0.3252574989159953 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}{I|L}VNEV;{[QN]|[E{I|L}]|[KN]}D{I|L}{I|L}VNEV;{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}{I|L}NVEV;{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}V{I|L}NEV;{[QN]|[E{I|L}]|[KN]}D{I|L}{I|L}NVEV;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}{I|L}VNEV;{[QN]|[E{I|L}]|[KN]}D{I|L}V{I|L}NEV;{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}VQVEV;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}{I|L}NVEV;{[QN]|[E{I|L}]|[KN]}D{I|L}VQVEV 3.9838;3.8149;3.8149;3.6951;3.646;3.6076;3.5262;3.5262;3.4387;3.3572 -;-;-;-;-;-;-;-;-;- 609 1 0.904 39986.9 1.0 11834 5719 17549 HBL1_DMSO_200M_050219_1,17555 HBL1_DMSO_200M_050219_1,17555,IPMELVNEV False True IPMELVNEV 84.027354 522.275866687298 16313694.0 17549.0 ENSG00000108773|ENST00000225916|KAT2A;;nc|ENSG00000108773|Q92830-2|KAT2A 3.7497204144795737 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17556 84.033 284.0 950680.0 25 0 47026.0 + 30111 QVIQGLEAL 9 109 970.558905249333 969.5516287827328 1 970.5594360232352 MULTI CID FTMS 0 0 0 17549 705304.4375 1.0 0 0.0 7 Unmodified _QVIQGLEAL_ ENSG00000126214|ENST00000334553|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866|KLC1 107.1870275148908 0.0071859432680538 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QG{I|L}EA{I|L} 9 0 + 102.02 0.0 0.0 10.523 10.523 83.802 0.0 0.0 0.0 18.212112250009653 12.948879477912968 12.948879477912968 0.4575749056067479 0 0.8807196863200843 1.5228787452803376 0.7302046884880937 2.385151878060192 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QG{I|L}EA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GAG{I|L}EA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}AGG{I|L}EA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GQ{I|L}EA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}AN{I|L}EA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QGE{I|L}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GAGE{I|L}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AVAG{I|L}EA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}AGGE{I|L}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}GG{I|L}EA{I|L} 10.523;10.475;10.394;9.9334;9.8517;9.6919;9.6447;9.5866;9.563;9.5049 +;-;-;-;-;-;-;-;-;- + 32082 1 0.904 177439.0 1.0 11835 5719 17549 HBL1_DMSO_200M_050219_1,17556 HBL1_DMSO_200M_050219_1,17556,QVIQGLEAL True True QVIQGLEAL 84.032612 970.559436023235 7917609.5 17549.0 nc|ENSG00000126214|Q07866-10|KLC1;;nc|ENSG00000126214|Q07866-2|KLC1;;nc|ENSG00000126214|Q07866-6|KLC1;;nc|ENSG00000126214|Q07866-5|KLC1;;nc|ENSG00000126214|Q07866-8|KLC1;;ENSG00000126214|ENST00000334553|KLC1;;nc|ENSG00000126214|Q07866-3|KLC1;;nc|ENSG00000126214|Q07866-7|KLC1;;nc|ENSG00000126214|Q07866|KLC1;;nc|ENSG00000126214|Q07866-4|KLC1 5.466799418131511 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17557 84.036 177.0 949480.0 25 0 70857.0 + 45677 YVVPFVAKV 9 147 511.3075973871371 1020.6006418410742 2 511.3072387576103 MULTI CID FTMS 0 0 0 17549 572445.8125 0.7998922139278434 1 -0.1197052001953125 8 Unmodified _YVVPFVAKV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 37.97399986684836 0.0865783450051559 3 YVVP{M(Oxidation (M))|F}VAKV 9 0 + 62.481 0.0 0.0 6.122 6.122 86.051 0.0 0.0 0.0 30.240373879641112 7.336267146403983 7.336267146403983 7.336267146403983 0 0.7396518287104438 1.6989700043360187 0.0 0.1643943297944484 + + YVVP{M(Oxidation (M))|F}VAKV;YVVP{M(Oxidation (M))|F}V[KG]{I|L};YVVV[KA]VM{I|L};YVVP{M(Oxidation (M))|F}[K{I|L}]GV;[YV]V[KA]VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[PS]{I|L}[{I|L}P]VWP{I|L};[PS]{I|L}[{I|L}P][KG]PNV;[PS]{I|L}[{I|L}P]A[KQ][PA] 6.122;5.4031;4.2981;4.1237;2.4435;1.3533;0.18549;0.17934 +;-;-;-;-;-;-;- + 836 + 1 0.904 131510.0 1.0 11836 5719 17549 HBL1_DMSO_200M_050219_1,17557 HBL1_DMSO_200M_050219_1,17557,YVVPFVAKV True True YVVPFVAKV 84.036056 511.30723875761 5584339.0 17549.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 6.886395295461019 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17558 84.042 314.0 649890.0 25 0 27122.0 + 30664 RFPEELTQTF 10 155 634.3192064214766 1266.623859909753 2 634.3195678591728 MULTI CID FTMS 0 0 0 17549 531098.5 0.649501781747646 8 -0.77386474609375 9 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 59.36838082759317 0.0382430275470746 3 [DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F} 10 5 + 69.075 0.0 0.0 5.4534 5.4534 78.194 0.0 0.0 0.0 0.7540048381462015 40.35825860970984 0.7540048381462015 2.6871206522225464 0 1.0 0.9208187539523752 1.7013020605695188 0.0 [DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}][EP]E{I|L}TQT{M(Oxidation (M))|F};[{I|L}T]DM[TP]{I|L}TQT{M(Oxidation (M))|F};{[WT]|[RM]}{[QN]|[E{I|L}]|[KN]}E{I|L}TQT{M(Oxidation (M))|F};[K{I|L}][C(Carbamidomethyl (C))Q]E{I|L}TQT{M(Oxidation (M))|F};[VP][W{M(Oxidation (M))|F}]E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[RE]|[WV]}E{I|L}TQT{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}T[AG]T{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{[VA]|[{I|L}G]}E{I|L}TQT{M(Oxidation (M))|F};[{I|L}P]{[NV]|[RG]}P[HN]TQT{M(Oxidation (M))|F} 5.4534;5.2413;5.1094;4.9709;4.9411;4.858;4.8217;4.7299;4.6838;4.647 -;+;-;-;-;-;-;-;-;- + 3737 1 0.904 152671.8 1.0 11837 5719 17549 HBL1_DMSO_200M_050219_1,17558 HBL1_DMSO_200M_050219_1,17558,RFPEELTQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17559 84.045 136.0 667870.0 25 0 71441.0 + 4615 DAYTVLTRI 9 133 526.2927680362789 1050.5709831393576 2 526.2930786013603 MULTI CID FTMS 0 0 0 17549 451237.625 0.0106639288981327 19 -1.7435379028320312 10 Unmodified _DAYTVLTRI_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 72.96794272382148 0.0199516581995792 3 {[DA]|[EG]}YTV{I|L}TR{I|L} 9 0 + 85.186 0.0 0.0 8.1086 8.1086 89.365 0.0 0.0 0.0 54.90454966214079 13.243273853014884 13.243273853014884 5.295000083553205 0 1.1989700043360187 1.6989700043360187 1.1237125054200234 0.2396518287104437 + + {[DA]|[EG]}YTV{I|L}TR{I|L};{[DA]|[EG]}YT{I|L}VTR{I|L};{[DA]|[EG]}Y{I|L}S{I|L}TR{I|L};{[DA]|[EG]}Y{I|L}TVTR{I|L};{[DA]|[EG]}YTV[KQ]KV;{[DA]|[EG]}YT{I|L}[R{I|L}]S{I|L};{[DA]|[EG]}Y{I|L}S[KQ]KV;{[DA]|[EG]}YT{I|L}[R{I|L}]TV;{[DA]|[EG]}Y{I|L}T[R{I|L}]S{I|L};{[DA]|[EG]}Y{I|L}T[R{I|L}]TV 8.1086;7.6045;7.5828;7.0788;5.6506;5.2308;5.1248;4.8319;4.705;4.3061 +;-;-;-;-;-;-;-;-;- + 502 + 1 0.904 74794.3 1.0 11838 5719 17549 HBL1_DMSO_200M_050219_1,17559 HBL1_DMSO_200M_050219_1,17559,DAYTVLTRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17560 84.052 433.0 597920.0 25 0 71218.0 + + 34316 DALDHVIDI 9 204 506.2626859621252 1010.5108189910504 2 506.2627441287041 MULTI CID FTMS 0 0 0 17549 328798.375 0.3341629858037196 -2 0.1182174682617187 11 Unmodified _SLRSSPHDL_ ENSG00000159069|ENST00000325285|FBXW5;ENST00000459905.5_1_9:139835382-139837220:-|nuORF;ENST00000483559.5_1_9:139835382-139837095:-|nuORF 37.97399986684836 0.0865783450051559 3 {NN|[MP]|[D{I|L}]|[EV]}HVDA{I|L}[QT] 9 -1 + 54.869 0.0 0.0 5.4298 5.4298 75.561 0.0 0.0 0.0 5.014648025657756 23.74434701741822 5.014648025657756 1.020599913279625 0 0.5189301784845296 1.5228787452803376 0.430884548956689 0.2059771852360797 {NN|[MP]|[D{I|L}]|[EV]}HVDA{I|L}[QT];{NN|[MP]|[D{I|L}]|[EV]}HVDAQT{I|L};{NN|[MP]|[D{I|L}]|[EV]}HVW{I|L}[QT];{NN|[MP]|[D{I|L}]|[EV]}HVWQT{I|L};{NN|[MP]|[D{I|L}]|[EV]}HVD{I|L}A[QT];VT{[MG]|[TS]}{[SA]|[TG]}V{M(Oxidation (M))|F}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}HV{I|L}DA[QT];VT{[MG]|[TS]}{[SA]|[TG]}W{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}H{[DA]|[EG]}V{I|L}[QT];{NN|[MP]|[D{I|L}]|[EV]}H{[DA]|[EG]}VQT{I|L} 5.4298;5.3288;4.9586;4.8576;4.7552;4.5745;4.3292;4.3213;4.3007;4.1997 -;-;-;-;-;-;-;-;-;- 3669 1 0.904 198588.0 1.0 11839 5719 17549 HBL1_DMSO_200M_050219_1,17560 HBL1_DMSO_200M_050219_1,17560,SLRSSPHDL False False DALDHVIDI 84.052266 505.7617 16135900.0 17549.0 ENSG00000159069|ENST00000325285|FBXW5;;ENST00000459905.5_1_9:139835382-139837220:-|nuORF;;ENST00000483559.5_1_9:139835382-139837095:-|nuORF 2.17541766166687 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17561 84.059 393.0 262300.0 25 0 28732.0 + 17142 KLIDETQDMLL 11 119 659.8493839586279 1317.6842149840556 2 659.8500854372978 MULTI CID FTMS 0 0 0 17549 292012.78125 0.4753063134741916 -2 0.1182174682617187 12 Unmodified _KLIDETQDMLL_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 37.77132515983256 0.2467275698964582 3 {I|L}{I|L}KDETQDM{I|L}{I|L} 11 2 + 81.79 0.0 0.0 6.2071 6.2071 84.42 0.0 0.0 0.0 5.262984045384741 16.57577319177794 5.262984045384741 5.262984045384741 0 0.9247425010840048 0.6575773191777937 1.1861818737241734 0.0 {I|L}{I|L}KDETQDM{I|L}{I|L};[K{I|L}]{I|L}DETQDM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]ETQDM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E[K{I|L}]TQDM{I|L}{I|L};{I|L}{I|L}KDET[AG]DM{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}D[K{I|L}]TQDM{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[K{I|L}]TQDM{I|L}{I|L};[K{I|L}]{I|L}DET[AG]DM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]ET[AG]DM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E[K{I|L}]T[AG]DM{I|L}{I|L} 6.2071;5.8077;5.6331;5.5362;5.5143;5.1887;5.1843;5.1149;4.9403;4.8434 -;+;-;-;-;-;-;-;-;- + 1884 1 0.904 86867.3 1.0 11840 5719 17549 HBL1_DMSO_200M_050219_1,17561 HBL1_DMSO_200M_050219_1,17561,KLIDETQDMLL False True KLIDETQDMLL 84.059316 659.850085437298 5070991.0 17549.0 nc|ENSG00000127481|Q5T4S7-2|UBR4;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4 6.021942297617595 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17562 84.067 413.0 258870.0 25 0 43263.0 + 9246 FGYPFRLNEA 10 125 607.3028612972427 1212.5911696612852 2 607.3015624880791 MULTI CID FTMS 0 0 0 17549 255257.546875 0.7445706425605982 -3 0.167449951171875 13 Unmodified _FGYPFRLNEA_ ENSG00000008282|ENST00000455385|SYPL1;nc|ENSG00000008282|Q16563|SYPL1 24.95707706330732 0.4079579053029958 3 {[QN]|[E{I|L}]|[KN]}[YV]P{M(Oxidation (M))|F}PYGE 10 7 + 49.771 0.0 0.0 4.1045 4.1045 73.676 0.0 0.0 0.0 2.5635960074451987 6.53212513775344 2.5635960074451987 2.5635960074451987 0 0.75 0.721246399047171 0.2887254899964357 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}[YV]P{M(Oxidation (M))|F}PYGE;{NN|[MP]|[D{I|L}]|[EV]}[Y{I|L}]P{M(Oxidation (M))|F}PYGE;[{I|L}V][YE]P{M(Oxidation (M))|F}PYGE;[{I|L}V][YE][RN]AYGE;{[QN]|[E{I|L}]|[KN]}[YV][RN]AYGE;[{I|L}V][Y{M(Oxidation (M))|F}][EP]PYGE;[{I|L}V]{[MG]|[TS]}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}AYGE;{NN|[MP]|[D{I|L}]|[EV]}[Y{I|L}][RN]AYGE;{M(Oxidation (M))|F}GYA{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}[PA]T{I|L};{M(Oxidation (M))|F}GYP[EP][YN]KV 4.1045;3.8931;3.768;3.0873;3.0736;2.9664;2.908;2.8622;2.5754;2.5011 -;-;-;-;-;-;-;-;-;- 481 1 0.904 80452.7 1.0 11841 5719 17549 HBL1_DMSO_200M_050219_1,17562 HBL1_DMSO_200M_050219_1,17562,FGYPFRLNEA False True FGYPFRLNEA 84.066691 607.301562488079 4263809.5 17549.0 ENSG00000008282|ENST00000455385|SYPL1;;nc|ENSG00000008282|Q16563|SYPL1 6.075239022572835 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17563 84.075 448.0 272100.0 25 0 18184.0 + 29154 QFIIEKDKL 9 154 567.3304970035759 1132.6464410739518 2 567.3320800662041 MULTI CID FTMS 0 0 0 17549 210227.25 0.6315869522622376 -2 0.1182174682617187 14 Unmodified _QFIIEKDKL_ REV__ENSG00000144674|ENST00000361924|GOLGA4;REV__nc|ENSG00000144674|Q13439-3|GOLGA4;REV__nc|ENSG00000144674|Q13439-4|GOLGA4;REV__nc|ENSG00000144674|Q13439-5|GOLGA4 13.90604991867851 0.4602628045680013 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 -1 16.031 0.0 0.0 1.4153 0.0 0.0 0.0 789.4124072206893 789.4124072206893 1.4887519094994808 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 1.4153 - 226 1 0.904 93594.7 1.0 11842 5719 17549 HBL1_DMSO_200M_050219_1,17563 HBL1_DMSO_200M_050219_1,17563,QFIIEKDKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17564 84.083 449.0 151990.0 25 0 6056.9 + -1 YTIELEKPVTL 11 117 653.2813598513603 0 653.2813598513603 PEAK CID FTMS 0 0 0 -1 0 15 2 Carbamidomethyl (C) _TYNC(Carbamidomethyl (C))C(Carbamidomethyl (C))FWVR_ chr4:67606389-67607194|48|46.31|0.9|5.69|+|ENST00000396225|STAP1,STAP1;ENSG00000035720|ENST00000265404|STAP1 7.910154910731844 0.3362437653303669 3 {I|L}E 2 -1 7.7866 0.0 0.0 0.59688 0.0 0.0 263.93434948612054 795.4641008116298 1059.3984502977503 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}E 0.59688 - 23 + 1 0.904 59671.1 1.0 11843 5719 17549 HBL1_DMSO_200M_050219_1,17564 HBL1_DMSO_200M_050219_1,17564,TYNCCFWVR False False YTIELEKPVTL 84.082643 653.28135985136 151179.34375 17549.0 chr4:67606389-67607194|48|46.31|0.9|5.69|+|ENST00000396225|STAP1,STAP1;;ENSG00000035720|ENST00000265404|STAP1 4.650712649027507 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17565 84.092 480.0 273070.0 25 0 32393.0 + + -1 IQEEILVHI 9 173 547.3140712088293 0 547.3177368044853 PEAK CID FTMS 0 0 0 17549 160011.109375 1.0 0 0.0 16 Oxidation (M) _LMKLM(Oxidation (M))CLIL_ ENST00000572221.5_1_16:67909733-67911757:+|nuORF;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;ENSG00000038358|ENST00000358933|EDC4 19.438996006549623 0.2061572778002301 3 {I|L}EHC{I|L}VH 7 -1 23.128 0.0 0.0 2.1168 0.0 0.0 130.10804856824603 128.07219873599846 258.1802473042445 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 {I|L}EHC{I|L}VH 2.1168 - 727 + 1 0.904 103582.1 1.0 11844 5719 17549 HBL1_DMSO_200M_050219_1,17565 HBL1_DMSO_200M_050219_1,17565,LMKLMCLIL False False IQEEILVHI 84.092318 547.317736804485 1009854.5625 17549.0 ENST00000572221.5_1_16:67909733-67911757:+|nuORF;;ENST00000536072.6_1_16:67909906-67914140:+|nuORF;;ENSG00000038358|ENST00000358933|EDC4 2.026386797428131 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17566 84.102 523.0 281310.0 25 0 14964.0 + 37281 VFRTDLITAM 10 178 583.8168617811676 0 583.8162109255791 PEAK CID FTMS 0 0 0 17549 140668.65625 1.0 0 0.0 17 Unmodified _TIPVFAFLGAM_ nc|ENSG00000043143|Q9NQC1|JADE2;ENSG00000043143|ENST00000681547|JADE2;ENSG00000077684|ENST00000226319|JADE1;nc|ENSG00000077684|Q6IE81-2|JADE1;nc|ENSG00000077684|Q6IE81-3|JADE1;nc|ENSG00000043143|Q9NQC1-3|JADE2;nc|ENSG00000043143|Q9NQC1-2|JADE2 24.020572477871973 0.3025672323349825 3 AT{I|L}{I|L} 4 9 31.943 0.0 0.0 2.7405 0.0 0.0 149.05477408009796 615.2905367486936 764.3453108287915 0.0 0.0 0.0 0.0 0 1.2786596949921218 0.0 0.5 0.0 AT{I|L}{I|L} 2.7405 - 207 + 1 0.904 112958.9 1.0 11845 5719 17549 HBL1_DMSO_200M_050219_1,17566 HBL1_DMSO_200M_050219_1,17566,TIPVFAFLGAM False False VFRTDLITAM 84.101528 583.816210925579 682768.875 17549.0 nc|ENSG00000043143|Q9NQC1|JADE2;;ENSG00000043143|ENST00000681547|JADE2;;ENSG00000077684|ENST00000226319|JADE1;;nc|ENSG00000077684|Q6IE81-2|JADE1;;nc|ENSG00000077684|Q6IE81-3|JADE1;;nc|ENSG00000043143|Q9NQC1-3|JADE2;;nc|ENSG00000043143|Q9NQC1-2|JADE2 5.460186004638672 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17567 84.114 703.0 343020.0 25 0 58099.0 23315 LTAGMYCA 8 189 415.18155994852793 0 415.1815063357353 PEAK CID FTMS 0 0 0 17549 135862.3125 1.0 0 0.0 18 Unmodified _LTAGMYCA_ ENSG00000169194|ENST00000304506|IL13 9.347437153973935 0.5488964601725408 3 V{I|L}{M(Oxidation (M))|F} 3 7 11.799 0.0 0.0 1.4243 0.0 0.0 106.98797266233004 359.1506746881469 466.13864735047696 0.0 0.0 0.0 0.0 0 0.0371854128202311 0.0 0.0 0.0 V{I|L}{M(Oxidation (M))|F} 1.4243 - 177 + 1 0.904 189456.0 1.0 11846 5719 17549 HBL1_DMSO_200M_050219_1,17567 HBL1_DMSO_200M_050219_1,17567,LTAGMYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17568 84.126 729.0 281760.0 25 0 18740.0 + 22543 LPWPFKQKV 9 219 381.56236751143865 1141.665273134516 3 381.5621215701103 MULTI CID FTMS 0 0 0 17549 133414.15625 0.5495799483304457 6 -0.5307540893554688 19 Unmodified _LPWPFKQKV_ ENSG00000131323|ENST00000392745|TRAF3;nc|ENSG00000131323|Q13114-2|TRAF3 18.373094154950223 0.3393451798331396 3 {I|L}PWVK{I|L}HS 8 5 61.134 0.0 0.0 5.3548 0.0 0.0 0.0 178.0991610162719 178.0991610162719 32.93411554787347 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.2887254899964358 0.7302046884880937 {I|L}PWVK{I|L}HS 5.3548 - 933 + 1 0.904 166090.0 1.0 11847 5719 17549 HBL1_DMSO_200M_050219_1,17568 HBL1_DMSO_200M_050219_1,17568,LPWPFKQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17569 84.137 537.0 32300.0 25 0 1736.9 -1 0 51 768.5634033083916 0 768.5634033083916 PEAK CID FTMS 0 0 0 -1 0 20 3 V 1 -1 5.4846 0.0 0.0 0.35727 0.0 0.0 954.7907947986206 478.2318209283813 1433.022615727002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.35727 - 2 + 1 0.904 21932.6 1.0 11848 5719 17549 HBL1_DMSO_200M_050219_1,17569 HBL1_DMSO_200M_050219_1,17569, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17571 84.141 2.2 21910000.0 25 0 4028900.0 + 4644 DAYVLPKLY 9 66 541.2999781941046 1080.585403455009 2 541.3005248904228 MULTI CID FTMS 0 0 0 17570 22534542.0 0.079604052874302 11 -0.9814987182617188 1 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 37.97399986684836 0.0865783450051559 3 {[DA]|[EG]}YV 4 5 34.781 0.0 0.0 3.2188 0.0 0.0 0.0 629.3659875216684 629.3659875216684 14.06804392152253 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YV 3.2188 + + 57 1 0.904 42676.9 1.0 11849 5720 17570 HBL1_DMSO_200M_050219_1,17571 HBL1_DMSO_200M_050219_1,17571,DAYVLPKLY True True DAYVLPKLY 84.141163 541.300524890423 19034170624.0 17570.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 7.253385225931804 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17572 84.142 3.3 13429000.0 25 0 2397600.0 + 2889 AVFDKTLAEL 10 70 553.8082526999918 1105.6019524667836 2 553.8085815310478 MULTI CID FTMS 0 0 0 17570 20440066.0 0.8160524667341917 -1 0.1197052001953125 2 Unmodified _AVFDKTLAEL_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;ENST00000539659.5_1_12:14576849-14613468:+|nuORF;ENST00000541654.1_1_12:14538317-14613468:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 40.72490554402381 0.149912226101682 3 {[VA]|[{I|L}G]}[YG]T{I|L}AVAE{I|L} 11 5 + 74.869 0.0 0.0 6.7718 6.7718 89.211 0.0 0.0 0.0 20.09514783722355 9.044938854093616 9.044938854093616 9.01863755803666 0 1.742992819099939 2.0 1.1989700043360187 0.0 {[VA]|[{I|L}G]}[YG]T{I|L}AVAE{I|L};{[VA]|[{I|L}G]}[YG]T{I|L}G{I|L}AE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}T{I|L}AVAE{I|L};{[VA]|[{I|L}G]}[YG]T{I|L}[Q{I|L}]E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}T{I|L}G{I|L}AE{I|L};{[CP]|[EA]}[YK]{I|L}AVAE{I|L};{[VA]|[{I|L}G]}[YG]{[VA]|[{I|L}G]}T{I|L}AE{I|L};{[CP]|[EA]}[YK]{I|L}G{I|L}AE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}T{I|L}[Q{I|L}]E{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}PK[R{M(Oxidation (M))|F}]E{I|L} 6.7718;5.9561;4.9542;4.4615;4.1385;3.8028;3.1999;2.9871;2.6479;2.4822 -;-;-;-;-;-;-;-;-;- 342 1 0.904 43306.2 1.0 11850 5720 17570 HBL1_DMSO_200M_050219_1,17572 HBL1_DMSO_200M_050219_1,17572,AVFDKTLAEL False True AVFDKTLAEL 84.14234 553.808581531048 431080800.0 17570.0 ENST00000541654.1_1_12:14538317-14613468:+|nuORF;;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;;ENSG00000171681|ENST00000261168|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;;ENST00000539659.5_1_12:14576849-14613468:+|nuORF 5.572272936503093 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17573 84.144 20.0 3068600.0 25 0 347680.0 + 9804 FPAPILRAV 9 59 492.305379542449 982.596206151698 2 492.3055297732353 MULTI CID FTMS 0 0 0 17570 2706795.75 0.8309820196397635 1 -0.03753662109375 3 Unmodified _FPAPILRAV_ chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161681590-161683167:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-11|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-14|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-4|FCRLA;nc|ENSG00000132185|Q7L513-5|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 32.30548876998284 0.1201446275138228 3 {M(Oxidation (M))|F}K{I|L}{I|L}PAPE 8 6 59.105 0.0 0.0 6.0152 0.0 0.0 69.05868727851718 0.0 69.05868727851718 0.0 47.68520469129962 0.0 0.0 0 1.0 0.0 0.0 0.0 {M(Oxidation (M))|F}K{I|L}{I|L}PAPE 6.0152 - 102 1 0.904 50579.7 1.0 11851 5720 17570 HBL1_DMSO_200M_050219_1,17573 HBL1_DMSO_200M_050219_1,17573,FPAPILRAV True True FPAPILRAV 84.143519 492.305529773235 140045412.0 17570.0 ENST00000470841.1_1_1:161681590-161683167:+|nuORF;;nc|ENSG00000132185|Q7L513-11|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-3|FCRLA;;chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;nc|ENSG00000132185|Q7L513-4|FCRLA;;nc|ENSG00000132185|Q7L513-14|FCRLA;;nc|ENSG00000132185|Q7L513-5|FCRLA 7.079091707865397 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17574 84.145 24.0 2345300.0 25 0 525170.0 + 9369 FIPPDGNFRL 10 44 588.3140312141247 1174.6135094950494 2 588.3146240115166 MULTI CID FTMS 0 0 0 17570 1954791.75 0.7205391570894784 1 -0.03753662109375 4 Unmodified _FIPPDGNFRL_ ENSG00000070718|ENST00000396926|AP3M2;ENSG00000185009|ENST00000355264|AP3M1;ENST00000480373.1_1_10:75888732-75889691:-|nuORF;nc|ENSG00000070718|P53677-2|AP3M2 16.149105407346934 0.5765757077271437 3 DPP{[QN]|[E{I|L}]|[KN]} 5 7 26.466 0.0 0.0 2.2532 0.0 0.0 605.3293109817173 0.0 605.3293109817173 0.0 19.47621246364342 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 DPP{[QN]|[E{I|L}]|[KN]} 2.2532 - 13 1 0.904 50191.2 1.0 11852 5720 17570 HBL1_DMSO_200M_050219_1,17574 HBL1_DMSO_200M_050219_1,17574,FIPPDGNFRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17575 84.146 42.0 2210500.0 25 0 290070.0 + 41466 VPLPNVPSI 9 98 468.2817208672013 934.5488888012028 2 468.2811462283134 MULTI CID FTMS 0 0 0 17570 1801988.375 0.4464150743105047 6 -0.5584640502929688 5 Unmodified _VPLPNVPSI_ ENSG00000101421|ENST00000217402|CHMP4B;nc|ENSG00000258469|P59074|CHMP4BP1 74.42276476219924 0.019389277360085 3 [VP]N{I|L}PVPS{I|L} 9 2 + 57.659 0.0 0.0 6.1697 6.1697 82.008 0.0 0.0 0.0 3.4678748622465605 16.694699959806982 3.4678748622465605 3.4678748622465605 0 0.9291746928241126 0.8239087409443188 0.3807196863200844 0.6989700043360187 [VP]N{I|L}PVPS{I|L};[NP]V{I|L}PVPS{I|L};[{I|L}P]VNPVPS{I|L};[{I|L}P]NVPVPS{I|L};[VP]{I|L}NPVPS{I|L};[VP]QVPVPS{I|L};[{I|L}P]NPVVPS{I|L};[VP]QPVVPS{I|L};[VP]NVP{I|L}PS{I|L};[NP]{I|L}VPVPS{I|L} 6.1697;5.7987;5.5255;5.4408;5.4218;5.3371;5.2034;5.0997;5.0055;4.966 -;-;-;-;-;-;-;-;-;- 939 1 0.904 76913.9 1.0 11853 5720 17570 HBL1_DMSO_200M_050219_1,17575 HBL1_DMSO_200M_050219_1,17575,VPLPNVPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17576 84.147 27.0 2061700.0 25 0 211300.0 + 24297 MAYPDLNEI 9 95 533.250190119819 1064.4858273064378 2 533.2501708865166 MULTI CID FTMS 0 0 0 17570 1682064.75 0.0689627600671299 12 -1.0546417236328125 6 Unmodified _MAYPDLNEI_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 18.13498045792455 0.3457906370836843 3 {[DS]|[MA]|[CV]|TT}YW 4 6 20.266 0.0 0.0 1.9038 0.0 0.0 0.0 510.2380605430192 510.2380605430192 -0.0886438348021556 0.0 -0.0886438348021556 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[DS]|[MA]|[CV]|TT}YW 1.9038 - 255 1 0.904 48065.7 1.0 11854 5720 17570 HBL1_DMSO_200M_050219_1,17576 HBL1_DMSO_200M_050219_1,17576,MAYPDLNEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17577 84.148 36.0 2387400.0 25 0 474840.0 + 9682 FLREYFERL 9 76 424.8958418863592 1271.6656962592776 3 424.8959838747978 MULTI CID FTMS 0 0 0 17570 1525491.125 0.5684804983130416 1 -0.03753662109375 7 Unmodified _FLREYFERL_ ENSG00000108946|ENST00000589228|PRKAR1A;ENST00000592194.1_1_17:66508623-66511738:+|nuORF;nc|ENSG00000108946|P10644-2|PRKAR1A 49.52724829834842 0.0414064571532091 3 {M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YEE{I|L}R 9 4 + 65.952 0.0 0.0 5.1863 5.1863 83.31 0.0 0.0 0.0 40.71842196392844 14.673392606792037 14.673392606792037 7.909393809954892 0 0.2742275032520141 0.0 1.6549471895720984 0.3807196863200844 {M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YEE{I|L}R;{M(Oxidation (M))|F}{I|L}REY{I|L}{M(Oxidation (M))|F}ER;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YE{I|L}ER;[R{I|L}]E{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}R{I|L}E;[R{I|L}]EY{M(Oxidation (M))|F}{M(Oxidation (M))|F}R{I|L}E;[R{I|L}]E{M(Oxidation (M))|F}YER{I|L}{M(Oxidation (M))|F};[R{I|L}]EY{M(Oxidation (M))|F}ER{I|L}{M(Oxidation (M))|F} 5.1863;4.5643;4.5117;4.4665;3.5025;3.0256;2.0617 -;-;-;-;-;-;- 363 + 1 0.904 74058.2 1.0 11855 5720 17570 HBL1_DMSO_200M_050219_1,17577 HBL1_DMSO_200M_050219_1,17577,FLREYFERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17578 84.15 55.0 1591100.0 25 0 145640.0 + + -1 SVISHLLRV 9 106 512.236239987042 1022.457927040884 2 512.2374145388603 MULTI CID FTMS 0 0 0 17570 1264145.75 0.2333528879212916 -3 0.2379226684570312 8 Carbamidomethyl (C),Oxidation (M) _VTVC(Carbamidomethyl (C))LM(Oxidation (M))MPG_ ENSG00000114520|ENST00000251775|SNX4;nc|ENSG00000114520|O95219-2|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF 30.22481116460888 0.1466181017706357 3 [VS]C(Carbamidomethyl (C)){I|L}{I|L} 5 -1 45.464 0.0 0.0 4.4465 0.0 0.0 0.0 447.1355142813715 447.1355142813715 28.63183495393587 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.9802046884880936 0.0 [VS]C(Carbamidomethyl (C)){I|L}{I|L} 4.4465 - 371 1 0.904 72045.5 1.0 11856 5720 17570 HBL1_DMSO_200M_050219_1,17578 HBL1_DMSO_200M_050219_1,17578,VTVCLMMPG False False SVISHLLRV 84.149644 512.23741453886 9346405.0 17570.0 ENSG00000114520|ENST00000251775|SNX4;;nc|ENSG00000114520|O95219-2|SNX4;;ENST00000471751.5_1_3:125166625-125239024:-|nuORF 2.506322224934896 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17579 84.151 22.0 2815300.0 25 0 318540.0 + 10634 FVPEIFHRI 9 70 386.5534250500801 1156.6384457504405 3 386.5525085330009 MULTI CID FTMS 0 0 0 17570 1259954.875 0.7491492986135783 -1 0.1197052001953125 9 Unmodified _FVPEIFHRI_ ENSG00000177302|ENST00000321105|TOP3A;ENST00000469739.6_1_17:18188617-18210429:-|nuORF;nc|ENSG00000177302|Q13472-2|TOP3A;nc|ENSG00000177302|Q13472-3|TOP3A 36.12702656103203 0.0967173616627612 3 [{M(Oxidation (M))|F}V]PE{I|L}{M(Oxidation (M))|F}H[R{I|L}] 9 0 + 48.98 0.0 0.0 4.2347 4.2347 74.403 0.0 0.0 0.0 17.041492120621044 11.751736484954378 11.751736484954378 2.887254899964361 0 0.2887254899964357 0.0 0.3494850021680094 0.8494850021680094 + + [{M(Oxidation (M))|F}V]PE{I|L}{M(Oxidation (M))|F}H[R{I|L}];N[KT]E{I|L}{M(Oxidation (M))|F}H[R{I|L}];[{M(Oxidation (M))|F}V]P{I|L}E{M(Oxidation (M))|F}H[R{I|L}];N[KT]{I|L}E{M(Oxidation (M))|F}H[R{I|L}];NP{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{M(Oxidation (M))|F}H[R{I|L}];[{M(Oxidation (M))|F}V]{I|L}PE{M(Oxidation (M))|F}H[R{I|L}];NP[R{M(Oxidation (M))|F}]A{M(Oxidation (M))|F}H[R{I|L}];NPWV[HV]H[R{I|L}];[{M(Oxidation (M))|F}V]{I|L}H[HV]H[R{I|L}] 4.2347;3.985;3.8222;3.5725;3.2704;3.1075;2.8579;2.7951;1.5316 +;-;-;-;-;-;-;-;- + 262 + 1 0.904 55696.3 1.0 11857 5720 17570 HBL1_DMSO_200M_050219_1,17579 HBL1_DMSO_200M_050219_1,17579,FVPEIFHRI True True FVPEIFHRI 84.150824 386.552508533001 21053561.5 17570.0 nc|ENSG00000177302|Q13472-3|TOP3A;;ENSG00000177302|ENST00000321105|TOP3A;;ENST00000469739.6_1_17:18188617-18210429:-|nuORF;;nc|ENSG00000177302|Q13472-2|TOP3A 4.7377950350443525 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17580 84.152 12.0 3333000.0 25 0 616090.0 + 37760 TLRPSTRWV 9 59 558.3190576824661 1114.623562431732 2 559.3217040896416 MULTI CID FTMS 0 0 0 17570 975587.625 0.5054110846174753 -2 0.1945877075195312 10 Unmodified _TLRPSTRWV_ REV__ENST00000368336.9_1_1:155658863-155679605:+|nuORF 4.75600775471527 0.7486543447549536 3 {I|L} 1 -1 13.64 0.0 0.0 1.2237 0.0 0.0 983.5282845770432 0.0 983.5282845770432 0.0 2.04628427264403 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L} 1.2237 + + 14 + 1 0.904 39025.4 1.0 11858 5720 17570 HBL1_DMSO_200M_050219_1,17580 HBL1_DMSO_200M_050219_1,17580,TLRPSTRWV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17581 84.153 38.0 1493500.0 25 0 168270.0 + 30103 QVIEELFKA 9 87 538.8021994661434 1075.5898459990867 2 538.8035156130791 MULTI CID FTMS 0 0 0 17570 898001.75 0.5416976291047899 -1 0.1197052001953125 11 Unmodified _QVIEELFKA_ ENSG00000137513|ENST00000281038|NARS2;nc|ENSG00000137513|Q96I59-2|NARS2 19.62595529434964 0.305431704817896 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EE{I|L}{M(Oxidation (M))|F}[KA] 9 0 + 54.759 0.0 0.0 5.0911 5.0911 86.273 0.0 0.0 0.0 34.61680837750819 8.256886463274284 8.256886463274284 12.391629779290165 0 0.2302046884880938 2.0 0.0 0.2614393726401688 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EE{I|L}{M(Oxidation (M))|F}[KA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EE{I|L}[KA]{M(Oxidation (M))|F};[KP]P{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}[KA];[KP]P{M(Oxidation (M))|F}E{I|L}[KA]{M(Oxidation (M))|F};[KP]PSE[R{I|L}]H{I|L};[KP]PSE{[VA]|[{I|L}G]}VH{I|L};[KP]P[KC]{[SA]|[TG]}{M(Oxidation (M))|F}[KA] 5.0911;3.939;3.4825;2.3304;2.0101;1.9676;1.163 +;-;-;-;-;-;- + 199 + 1 0.904 49417.3 1.0 11859 5720 17570 HBL1_DMSO_200M_050219_1,17581 HBL1_DMSO_200M_050219_1,17581,QVIEELFKA False True QVIEELFKA 84.15318 538.803515613079 10683138.0 17570.0 nc|ENSG00000137513|Q96I59-2|NARS2;;ENSG00000137513|ENST00000281038|NARS2 5.998908996582031 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17582 84.155 74.0 1098300.0 25 0 178760.0 1438 ALEEQHSL 8 86 463.7315011170608 925.4484493009217 2 463.7314025759697 MULTI CID FTMS 0 0 0 17570 892034.0625 0.2040013992543713 34 -3.253753662109375 12 Unmodified _ALEEQHSL_ ENSG00000153066|ENST00000283033|TXNDC11;nc|ENSG00000153066|Q6PKC3|TXNDC11 26.34127834903884 0.4900704351052977 3 [{I|L}A]{[DA]|[EG]}{M(Oxidation (M))|F}PP 7 5 44.525 0.0 0.0 4.8112 0.0 0.0 0.0 211.1075823205678 211.1075823205678 19.38711633297771 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.075257498915995 0.0 [{I|L}A]{[DA]|[EG]}{M(Oxidation (M))|F}PP 4.8112 - 63 1 0.904 67492.6 1.0 11860 5720 17570 HBL1_DMSO_200M_050219_1,17582 HBL1_DMSO_200M_050219_1,17582,ALEEQHSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17583 84.156 46.0 1470300.0 25 0 172880.0 + + 23700 AVFRELPSL 9 97 516.2954331184854 1030.5763133037708 2 516.2976562380791 MULTI CID FTMS 0 0 0 17570 830810.3125 0.6397590633975805 3 -0.2533340454101562 13 Unmodified _LTTIRNNSL_ ENST00000477288.5_1_6:30876177-30879964:+|nuORF;ENSG00000213780|ENST00000259895|GTF2H4 34.40172386719151 0.1061884637610825 3 AV{M(Oxidation (M))|F}E[Q{I|L}]T{I|L} 8 -1 34.435 0.0 0.0 3.3413 0.0 0.0 111.0632040281833 0.0 111.0632040281833 0.0 13.632900219968109 0.0 0.0 0 0.4247425010840047 0.0 0.9119543704721594 0.0 AV{M(Oxidation (M))|F}E[Q{I|L}]T{I|L} 3.3413 - 940 + 1 0.904 59902.2 1.0 11861 5720 17570 HBL1_DMSO_200M_050219_1,17583 HBL1_DMSO_200M_050219_1,17583,LTTIRNNSL False False AVFRELPSL 84.15618 516.297656238079 13456697.0 17570.0 ENST00000477288.5_1_6:30876177-30879964:+|nuORF;;ENSG00000213780|ENST00000259895|GTF2H4 4.925839265187581 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17584 84.159 148.0 751930.0 25 0 97710.0 + 35796 SVISHLLRV 9 96 341.8818862152666 1022.6238292459998 3 341.8817016482353 MULTI CID FTMS 0 0 0 17570 775476.0625 0.9378718571101166 -1 0.1197052001953125 14 Unmodified _SVISHLLRV_ ENSG00000114520|ENST00000251775|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;nc|ENSG00000114520|O95219-2|SNX4 21.53697664764585 0.2571576504437394 3 [VS]{I|L}SH{I|L}V[R{I|L}] 9 2 + 57.598 0.0 0.0 5.6323 5.6323 76.199 0.0 0.0 0.0 15.34195591137106 1.0071123335628585 1.0071123335628585 1.0071123335628585 0 0.3494850021680094 2.0 0.0 0.0 [VS]{I|L}SH{I|L}V[R{I|L}];[VS]{I|L}SH{I|L}{I|L}[RV];[VS]{I|L}SHV{I|L}[R{I|L}];[VS]{I|L}SVH{I|L}[R{I|L}];[VS]{I|L}VSH{I|L}[R{I|L}];[VS]{I|L}V[HT]V[R{I|L}];[VS]{I|L}V[HT]{I|L}[RV] 5.6323;5.5339;5.338;5.0436;4.7492;3.7988;3.7003 -;+;-;-;-;-;- + 173 + 1 0.904 92988.8 1.0 11862 5720 17570 HBL1_DMSO_200M_050219_1,17584 HBL1_DMSO_200M_050219_1,17584,SVISHLLRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17585 84.161 102.0 1112700.0 25 0 168160.0 + 9904 FPFYGKPMRI 10 86 419.2266611861339 1254.6581541586015 3 419.2267944216728 MULTI CID FTMS 0 0 0 17570 696472.4375 0.0572168207761881 28 -2.627670288085937 15 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 39.94969957227396 0.1580982266129622 3 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 67.612 0.0 0.0 5.3889 0.0 0.0 119.07406813789218 0.0 119.07406813789218 0.0 42.69077524932108 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.3889 - 509 1 0.904 97630.7 1.0 11863 5720 17570 HBL1_DMSO_200M_050219_1,17585 HBL1_DMSO_200M_050219_1,17585,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17586 84.163 54.0 1050800.0 25 0 98829.0 + 44690 YPFKPPMI 8 75 496.7673432328521 991.5201335325042 2 496.7683593630791 MULTI CID FTMS 0 0 0 17570 632569.4375 0.0507780459911099 12 -1.0546417236328125 16 Unmodified _YPFKPPMI_ ENSG00000156587|ENST00000287156|UBE2L6 34.18733598223924 0.3315367612694167 3 YP{M(Oxidation (M))|F}K 4 4 49.725 0.0 0.0 5.015 0.0 0.0 0.0 453.2183946653662 453.2183946653662 32.51393987558032 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + YP{M(Oxidation (M))|F}K 5.015 + + 69 + 1 0.904 47346.2 1.0 11864 5720 17570 HBL1_DMSO_200M_050219_1,17586 HBL1_DMSO_200M_050219_1,17586,YPFKPPMI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17587 84.166 141.0 714130.0 25 0 91592.0 + 42783 VVISSDGQFAL 11 119 568.3032507927411 1134.591948652282 2 568.3035156130791 MULTI CID FTMS 0 0 0 17570 541341.3125 0.080199336735582 -5 0.33489990234375 17 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 38.17557092003332 0.2405003631267018 3 VV{I|L}{[C(Carbamidomethyl (C))E]|[WC]}GQ{M(Oxidation (M))|F}A{I|L} 10 3 + 42.668 0.0 0.0 3.7607 3.7607 75.848 0.0 0.0 0.0 11.271278079431752 8.194765492042109 8.194765492042109 4.758950235313854 0 0.6237125054200234 2.0 0.4247425010840047 0.0 VV{I|L}{[C(Carbamidomethyl (C))E]|[WC]}GQ{M(Oxidation (M))|F}A{I|L};VV{I|L}[WC(Carbamidomethyl (C))]Q{M(Oxidation (M))|F}A{I|L};VV{I|L}S[{M(Oxidation (M))|F}E][{M(Oxidation (M))|F}T]{[HG]|PP};VV{I|L}{[C(Carbamidomethyl (C))E]|[WC]}G[AG]{M(Oxidation (M))|F}A{I|L};[AG]GDSS{I|L}VV{M(Oxidation (M))|F}A{I|L};{[QG]|[NA]}DSS{I|L}VV{M(Oxidation (M))|F}A{I|L};VV{I|L}[WC(Carbamidomethyl (C))][AG]{M(Oxidation (M))|F}A{I|L};[AG]GDSS{M(Oxidation (M))|F}{I|L}VVA{I|L};[AG]GDSS{I|L}{M(Oxidation (M))|F}VVA{I|L};{[QG]|[NA]}DSS{M(Oxidation (M))|F}{I|L}VVA{I|L} 3.7607;3.3412;2.9901;2.9529;2.7673;2.6905;2.5297;2.1489;2.1276;2.0721 -;-;-;-;-;-;-;-;-;- 731 1 0.904 82750.2 1.0 11865 5720 17570 HBL1_DMSO_200M_050219_1,17587 HBL1_DMSO_200M_050219_1,17587,VVISSDGQFAL False True VVISSDGQFAL 84.165534 568.303515613079 225014856.0 17570.0 ENST00000514183.5_1_5:180665952-180670713:-|nuORF;;ENSG00000204628|ENST00000512805|RACK1;;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;;ENST00000505461.5_1_5:180668319-180670896:-|nuORF 3.79663602511088 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17588 84.167 83.0 588710.0 25 0 48415.0 + 22871 LSAQLLSISYV 11 99 597.3431812214756 1192.671809509751 2 597.3428832888603 MULTI CID FTMS 0 0 0 17570 531315.9375 0.6478901180591286 1 -0.03753662109375 18 Unmodified _LSAQLLSISYV_ ENSG00000196578|ENST00000358642|OR5AC2 20.580933911654288 0.6070398941446662 3 {[TV]|[{I|L}S]}[PS]KS{I|L}S{I|L}YV 11 5 + 57.004 0.0 0.0 4.7795 4.7795 78.2 0.0 0.0 0.0 11.114079997524776 9.797513843253569 9.797513843253569 4.14697116001868 0 1.242992819099939 1.6989700043360187 0.2134679910804404 0.0 {[TV]|[{I|L}S]}[PS]KS{I|L}S{I|L}YV;{[TV]|[{I|L}S]}[QA]S{I|L}{I|L}S{I|L}YV;{[TV]|[{I|L}S]}[QA]{I|L}S{I|L}S{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}[VG]KS{I|L}S{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}[RK]S{I|L}S{I|L}YV;{[VA]|[{I|L}G]}C(Carbamidomethyl (C))R{I|L}{I|L}S{I|L}YV;{[VA]|[{I|L}G]}GCR{I|L}{I|L}S{I|L}YV;{[TV]|[{I|L}S]}[PS]K{[WT]|[RM]}{I|L}YV;{[VA]|[{I|L}G]}[DV]KS{I|L}S{I|L}YV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}S{I|L}YV 4.7795;4.4318;4.3233;3.8477;3.5487;3.458;3.2522;3.1608;3.1288;2.9812 -;-;-;-;-;-;-;-;-;- 496 1 0.904 41801.8 1.0 11866 5720 17570 HBL1_DMSO_200M_050219_1,17588 HBL1_DMSO_200M_050219_1,17588,LSAQLLSISYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17589 84.171 192.0 767480.0 25 0 60374.0 + 27414 PINNILISL 9 138 498.8077171522641 995.6008813713282 2 498.8083068728447 MULTI CID FTMS 0 0 0 17570 520651.59375 0.4135420354680808 -3 0.2379226684570312 19 Unmodified _PINNILISL_ REV__ENSG00000148735|ENST00000694986|PLEKHS1;REV__nc|ENSG00000148735|Q5SXH7-1|PLEKHS1;REV__nc|ENSG00000148735|Q5SXH7-4|PLEKHS1 34.10243960390752 0.1078313939113124 3 [QP]Q{I|L}{I|L}TVVV 9 -1 + 54.331 0.0 0.0 5.4571 5.4571 84.758 0.0 0.0 0.0 11.663092650152224 21.3862585930817 11.663092650152224 8.617646881713767 0 0.0 0.6020599913279624 0.3494850021680094 0.5941876774005248 [QP]Q{I|L}{I|L}TVVV;[QP]Q{I|L}{I|L}VVTV;[QP]Q{I|L}VV{I|L}TV;[QP][AG]{I|L}{I|L}TVVV;[QP]Q{I|L}{I|L}VTVV;[QP]Q{I|L}V{I|L}VTV;[PG]AQ{I|L}{I|L}TVVV;[QP]Q{I|L}V{I|L}TVV;[{I|L}P]QQ{I|L}TVVV;[QP]VAA{I|L}TVVV 5.4571;4.5916;4.5423;4.5322;4.3245;4.063;3.9576;3.796;3.6878;3.6834 -;-;-;-;-;-;-;-;-;- 2888 1 0.904 112895.2 1.0 11867 5720 17570 HBL1_DMSO_200M_050219_1,17589 HBL1_DMSO_200M_050219_1,17589,PINNILISL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17590 84.175 177.0 831270.0 25 0 116550.0 11369 GGCVPDFL 8 136 404.1873060488136 806.3600591644273 2 404.1873962283134 MULTI CID FTMS 0 0 0 17570 511771.5625 0.5147697423449615 -2 0.1945877075195312 20 Unmodified _GGCVPDFL_ ENSG00000123411|ENST00000547167|IKZF4;ENST00000547668.5_1_12:56415277-56418480:+|nuORF 10.183394434864962 0.7604730176254005 3 D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L} 6 6 + 46.138 0.0 0.0 5.7218 5.7218 88.056 0.0 0.0 0.0 16.197887582883936 10.796896906561033 10.796896906561033 10.796896906561033 0 0.6307196863200843 0.0 0.4247425010840047 0.0 D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};D{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}H;D{M(Oxidation (M))|F}{I|L}E{M(Oxidation (M))|F}H;{[YC]|[HE]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}ED{M(Oxidation (M))|F}{I|L};D{M(Oxidation (M))|F}E{[NV]|[RG]}[PS];{[YC]|[HE]}YY[VP];{[QG]|[NA]}{NN|[MP]|[D{I|L}]|[EV]}D{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}D]|MM}{[QC]|[C(Carbamidomethyl (C))A]}V[VP] 5.7218;4.3828;4.3544;3.5262;2.5605;1.9915;0.75231;0.6733;0.32602 -;-;-;-;-;-;-;-;- 196 + 1 0.904 116542.0 1.0 11868 5720 17570 HBL1_DMSO_200M_050219_1,17590 HBL1_DMSO_200M_050219_1,17590,GGCVPDFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17592 84.179 25.0 2792900.0 25 0 520290.0 + 35885 SVLQSIEKI 9 80 508.80304575535416 1015.5915385775083 2 508.8032714724541 MULTI CID FTMS 0 0 0 17591 3289126.5 1.0 0 0.0 1 Unmodified _SVLQSIEKI_ ENSG00000121931|ENST00000369763|LRIF1 49.55428908609986 0.0413471690215031 3 [VS]{I|L}QS{I|L}EK{I|L} 9 0 + 85.429 0.0 0.0 8.4117 8.4117 93.735 0.0 0.0 0.0 36.6977420686673 11.706962271689749 11.706962271689749 9.208187539523747 0 0.8494850021680094 2.0 0.7614393726401688 0.4247425010840047 + + [VS]{I|L}QS{I|L}EK{I|L};[VS]{I|L}[AG]S{I|L}EK{I|L} 8.4117;7.505 +;- + 311 + 1 0.905 56620.8 1.0 11869 5721 17591 HBL1_DMSO_200M_050219_1,17592 HBL1_DMSO_200M_050219_1,17592,SVLQSIEKI True True SVLQSIEKI 84.178703 508.803271472454 27387432.0 17591.0 ENSG00000121931|ENST00000369763|LRIF1 4.763951301574707 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17593 84.18 34.0 1713800.0 25 0 348280.0 + 41856 VPYLVGQVV 9 74 487.289371931678 972.564190930156 2 487.2896606326103 MULTI CID FTMS 0 0 0 17591 1830088.75 0.0971576114147331 7 -0.6805343627929688 2 Unmodified _VPYLVGQVV_ ENSG00000126088|ENST00000246337|UROD;ENST00000494399.5_1_1:45478966-45479784:+|nuORF 42.96799951952854 0.0591636306142405 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV 9 2 + 46.533 0.0 0.0 4.7845 4.7845 76.586 0.0 0.0 0.0 4.771212547196626 10.330145895351848 4.771212547196626 3.0102999566398125 0 0.8182503180159344 0.0 0.0 0.4247425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}VGQVV;[VP]Y{I|L}VGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGQVVV;[Y{I|L}]PVVGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGVQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GVQVV;[VP]Y{I|L}GQVVV;[Y{I|L}]PVGQVVV 4.7845;4.475;4.294;4.2469;4.2251;4.0658;3.9374;3.7563;3.7563;3.6875 -;-;+;-;-;-;-;-;-;- + 414 1 0.905 50861.0 1.0 11870 5721 17591 HBL1_DMSO_200M_050219_1,17593 HBL1_DMSO_200M_050219_1,17593,VPYLVGQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17594 84.181 29.0 2132300.0 25 0 417440.0 + 3724 DAFRQPSLFY 10 68 622.308660861823 1242.602768790446 2 622.3090698122978 MULTI CID FTMS 0 0 0 17591 2135266.0 1.0 0 0.0 3 Unmodified _DAFRQPSLFY_ ENSG00000197442|ENST00000359015|MAP3K5 38.61474834105838 0.1721950110283317 3 Q[PS]{I|L}{M(Oxidation (M))|F}Y 6 4 41.159 0.0 0.0 3.3123 0.0 0.0 489.2342692872609 0.0 489.2342692872609 0.0 21.77317490243957 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.0 + Q[PS]{I|L}{M(Oxidation (M))|F}Y 3.3123 + + 231 1 0.905 53143.7 1.0 11871 5721 17591 HBL1_DMSO_200M_050219_1,17594 HBL1_DMSO_200M_050219_1,17594,DAFRQPSLFY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17595 84.182 41.0 2004000.0 25 0 106380.0 + 25632 NFQAIRVTL 9 114 531.3096196897668 1060.6046864463335 2 531.3098022341728 MULTI CID FTMS 0 0 0 17591 1481794.75 0.5843030018880097 -2 0.1572418212890625 4 Unmodified _NFQAIRVTL_ ENSG00000173409|ENST00000310256|ARV1 36.506200033944 0.094635877243972 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QA{I|L}RVT{I|L} 9 0 + 33.409 0.0 0.0 3.15 3.15 75.233 0.0 0.0 0.0 2.607860423301432 0.9035320620284608 0.9035320620284608 5.350841191500486 0 1.0172203223519531 0.0 0.3807196863200844 0.4247425010840047 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QA{I|L}RVT{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QA{I|L}R{I|L}S{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Q{I|L}ARVT{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QA{I|L}[KG][KG]V;[TA]{I|L}[C(Carbamidomethyl (C))K]RVT{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QA{I|L}R{I|L}TV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[AG]A{I|L}RVT{I|L};[TA][C(Carbamidomethyl (C))K]{I|L}RVT{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Q{I|L}AR{I|L}S{I|L};[TA]{I|L}[C(Carbamidomethyl (C))K]R{I|L}S{I|L} 3.15;2.6455;2.4909;2.4119;2.3693;2.3462;2.2818;2.2779;1.9864;1.8648 +;-;-;-;-;-;-;-;-;- + 334 + 1 0.905 67635.3 1.0 11872 5721 17591 HBL1_DMSO_200M_050219_1,17595 HBL1_DMSO_200M_050219_1,17595,NFQAIRVTL True True NFQAIRVTL 84.182246 531.309802234173 19642624.0 17591.0 ENSG00000173409|ENST00000310256|ARV1 4.631977717081706 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17596 84.183 35.0 2030900.0 25 0 362450.0 1898 ALYSDRSI 8 70 462.7439258842263 923.4732988352524 2 462.7437011599541 MULTI CID FTMS 0 0 0 17591 1390527.125 0.7895615946107581 -1 0.03753662109375 5 Unmodified _ALYSDRSI_ ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5 19.438996006549623 0.6237395211498085 3 [{I|L}A]P{I|L} 4 5 38.94 0.0 0.0 4.2167 0.0 0.0 0.0 526.1923311822874 526.1923311822874 25.76606256887672 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.2167 - 24 + 1 0.905 62481.0 1.0 11873 5721 17591 HBL1_DMSO_200M_050219_1,17596 HBL1_DMSO_200M_050219_1,17596,ALYSDRSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17597 84.185 35.0 2324800.0 25 0 242380.0 + 4623 DAYVGYMTI 9 120 516.7383444483828 1031.4621359635655 2 516.7392455935478 MULTI CID FTMS 0 0 0 17591 1244547.125 0.8065024021618241 -1 0.03753662109375 6 Unmodified _DAYVGYMTI_ ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-2|FBXO11;nc|ENSG00000138081|Q86XK2-3|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11 54.773552608820026 0.0299037012502309 3 {[DA]|[EG]}YRY 5 5 31.973 0.0 0.0 3.0997 0.0 0.0 0.0 360.15778961030304 360.15778961030304 7.574908058443608 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.3054621874040891 0.0 {[DA]|[EG]}YRY 3.0997 - 975 1 0.905 69133.1 1.0 11874 5721 17591 HBL1_DMSO_200M_050219_1,17597 HBL1_DMSO_200M_050219_1,17597,DAYVGYMTI True True DAYVGYMTI 84.184605 516.739245593548 31502238.0 17591.0 nc|ENSG00000138081|Q86XK2-3|FBXO11;;nc|ENSG00000138081|Q86XK2-6|FBXO11;;ENSG00000138081|ENST00000403359|FBXO11;;nc|ENSG00000138081|Q86XK2-2|FBXO11;;nc|ENSG00000138081|Q86XK2-5|FBXO11 4.85187045733134 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17598 84.186 49.0 1410300.0 25 0 177020.0 + 44562 YPFEPPQI 8 94 495.75007820087126 989.4856034685424 2 495.7507812380791 MULTI CID FTMS 0 0 0 17591 687824.125 0.2414205775919861 -7 0.4136199951171875 7 Unmodified _YPFEPPQI_ ENSG00000077152|ENST00000646651|UBE2T;ENST00000487227.5_1_1:202302298-202304891:-|nuORF 34.18733598223924 0.3315367612694167 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EP 5 3 38.729 0.0 0.0 3.914 0.0 0.0 0.0 353.18195106134164 353.18195106134164 20.93704052456225 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.4247425010840047 0.0 + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EP 3.914 + + 228 1 0.905 56051.0 1.0 11875 5721 17591 HBL1_DMSO_200M_050219_1,17598 HBL1_DMSO_200M_050219_1,17598,YPFEPPQI False True YPFEPPQI 84.1859 495.750781238079 139583064.0 17591.0 ENSG00000077152|ENST00000646651|UBE2T;;ENST00000487227.5_1_1:202302298-202304891:-|nuORF 2.479583005110422 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17599 84.187 52.0 637570.0 25 0 38485.0 + 29802 QQFQEPFVAV 10 66 596.8028309465891 1191.591108959978 2 596.8035156130791 MULTI CID FTMS 0 0 0 17591 659606.0 0.286934204858327 -2 0.1572418212890625 8 Unmodified _QQFQEPFVAV_ ENSG00000121022|ENST00000357849|COPS5;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 37.97399986684836 0.1789611706409123 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EQQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}] 9 6 + 26.557 0.0 0.0 2.2287 2.2287 69.16 0.0 0.0 0.0 2.0289375146764854 9.44460515398866 2.0289375146764854 2.0289375146764854 0 0.3807196863200844 0.0 1.1549471895720984 0.3807196863200844 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EQQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[HT][YV][R{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q[YV][R{I|L}] 2.2287;2.0584;1.6421;0.81036;0.26444 -;-;-;-;- 279 1 0.905 34411.5 1.0 11876 5721 17591 HBL1_DMSO_200M_050219_1,17599 HBL1_DMSO_200M_050219_1,17599,QQFQEPFVAV False True QQFQEPFVAV 84.187265 596.803515613079 41399172.0 17591.0 ENSG00000121022|ENST00000357849|COPS5;;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 4.833985487620036 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17600 84.189 100.0 648130.0 25 0 140900.0 18626 LAFLVLYNFII 11 87 442.60092637522587 1324.7809497258777 3 442.6009704470634 MULTI CID FTMS 0 0 0 17591 560949.5625 0.4429082561554535 -2 0.1572418212890625 9 Unmodified _LAFLVLYNFII_ ENSG00000058063|ENST00000323116|ATP11B 6.723162845929126 0.8434276150410019 3 [{I|L}A][WE]S{I|L} 6 8 23.874 0.0 0.0 1.8021 0.0 0.0 0.0 622.3986502628068 622.3986502628068 11.109740141365345 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5 0.0 [{I|L}A][WE]S{I|L} 1.8021 - 120 1 0.905 73200.9 1.0 11877 5721 17591 HBL1_DMSO_200M_050219_1,17600 HBL1_DMSO_200M_050219_1,17600,LAFLVLYNFII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17601 84.192 123.0 665740.0 25 0 85419.0 + -1 LAEMEMSL 8 122 478.2091679885692 954.4037830439383 2 478.2088500857353 MULTI CID FTMS 0 0 0 17591 568870.5 0.2739759113608974 35 -3.3842086791992188 10 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 10.183394434864962 0.7604730176254005 3 [{I|L}A]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))A 6 -1 26.655 0.0 0.0 2.7929 0.0 0.0 0.0 242.0896676836992 242.0896676836992 11.872194452290543 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))A 2.7929 - 100 1 0.905 68273.0 1.0 11878 5721 17591 HBL1_DMSO_200M_050219_1,17601 HBL1_DMSO_200M_050219_1,17601,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17602 84.195 136.0 1562400.0 25 0 256270.0 + -1 LTLGCETF 8 116 470.7263124699047 939.4380720066094 2 470.7265197634697 MULTI CID FTMS 0 0 0 17591 537814.8125 0.1104624470886511 -1 0.03753662109375 11 Carbamidomethyl (C) _LTLGC(Carbamidomethyl (C))ETF_ REV__ENSG00000095110|ENST00000534921|NXPE1;REV__ENSG00000204361|ENST00000389586|NXPE2;REV__nc|ENSG00000095110|Q8N323-2|NXPE1;REV__nc|ENSG00000204361|Q96DL1-3|NXPE2;REV__NXPE2|p.M335Nfs*8|1|0.33|ENSG00000204361|chr11:114705848-114705849|-/A|frameshift_variant 38.15118350030904 0.2652218139009398 3 {I|L}A{I|L} 3 -1 45.93 0.0 0.0 4.8891 0.0 0.0 0.0 639.2105952135449 639.2105952135449 16.972353285392643 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 {I|L}A{I|L} 4.8891 - 610 + 1 0.905 168324.7 1.0 11879 5721 17591 HBL1_DMSO_200M_050219_1,17602 HBL1_DMSO_200M_050219_1,17602,LTLGCETF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17603 84.197 131.0 834640.0 25 0 137430.0 + 9685 RIMSGESTFFV 11 79 636.8405749224725 1271.6665969117448 2 636.8411132693291 MULTI CID FTMS 0 0 0 17591 504719.03125 0.5969290933195056 2 -0.2157974243164062 12 Unmodified _FLREYFERL_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-4|MSH6;nc|ENSG00000116062|P52701-3|MSH6 26.020703789607367 0.2001090068861241 3 D{I|L}ER{I|L} 5 5 28.148 0.0 0.0 2.2135 0.0 0.0 627.3212757794937 0.0 627.3212757794937 0.0 14.234772415013325 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 D{I|L}ER{I|L} 2.2135 - 182 1 0.905 83472.8 1.0 11880 5721 17591 HBL1_DMSO_200M_050219_1,17603 HBL1_DMSO_200M_050219_1,17603,FLREYFERL False True RIMSGESTFFV 84.197382 636.841113269329 4507872.5 17591.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 5.277808507283528 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17604 84.199 76.0 894160.0 25 0 72909.0 22538 LPWLCIILW 9 76 578.8306695700735 1155.646786206947 2 578.8361694216728 MULTI CID FTMS 0 0 0 17591 454035.46875 0.9690510164703128 -1 0.03753662109375 13 Unmodified _LPWLCIILW_ ENSG00000145863|ENST00000274545|GABRA6 20.871210003555333 0.2717241269066626 3 {I|L}PWP 4 6 44.329 0.0 0.0 3.8359 0.0 0.0 0.0 659.3613375299436 659.3613375299436 20.11607129009924 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 {I|L}PWP 3.8359 - 116 + 1 0.905 59939.6 1.0 11881 5721 17591 HBL1_DMSO_200M_050219_1,17604 HBL1_DMSO_200M_050219_1,17604,LPWLCIILW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17605 84.204 265.0 666490.0 25 0 58049.0 + 18861 LASQHEEL 8 171 309.490381674979 925.449315625137 3 309.4900695681572 MULTI CID FTMS 0 0 0 17591 391225.5625 0.7699044256464788 4 -0.3735122680664062 14 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 3 {I|L}{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 1.7779 0.0 0.0 647.3024095036537 0.0 647.3024095036537 0.0 -1.3380312008851585 -1.3380312008851585 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.7779 - 183 1 0.905 142143.7 1.0 11882 5721 17591 HBL1_DMSO_200M_050219_1,17605 HBL1_DMSO_200M_050219_1,17605,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17606 84.211 396.0 259470.0 25 0 44300.0 + 5376 DLKKPALTVPV 11 112 590.866570803611 1179.718588674022 2 590.8665649294853 MULTI CID FTMS 0 0 0 17591 363672.84375 0.1279363892842371 10 -0.9439620971679688 15 Unmodified _DLKKPALTVPV_ REV__ENSG00000092853|ENST00000318121|CLSPN;REV__nc|ENSG00000092853|Q9HAW4-3|CLSPN 1.3296431237094175 0.8688745925763601 3 E{I|L}M 3 -1 13.812 0.0 0.0 1.1708 0.0 0.0 243.2583358437469 560.2689303033811 803.5272661471281 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}M 1.1708 - 88 + 1 0.905 85330.1 1.0 11883 5721 17591 HBL1_DMSO_200M_050219_1,17606 HBL1_DMSO_200M_050219_1,17606,DLKKPALTVPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17607 84.214 164.0 663430.0 25 0 106910.0 -1 ALLETYCA 8 101 314.15321840409246 939.4378258124774 3 314.1529418826103 MULTI CID FTMS 0 0 0 17591 355236.125 0.0929198884185385 -1 0.03753662109375 16 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 20.453626601364224 0.6087503291685402 3 A{I|L}{I|L} 3 -1 49.253 0.0 0.0 5.2428 0.0 0.0 0.0 639.2107474695716 639.2107474695716 36.0649218306807 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 A{I|L}{I|L} 5.2428 + + 57 + 1 0.905 94895.2 1.0 11884 5721 17591 HBL1_DMSO_200M_050219_1,17607 HBL1_DMSO_200M_050219_1,17607,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17608 84.224 556.0 299920.0 25 0 36254.0 16810 KGPHLRSKQL 10 157 388.5714107292959 1162.6924027880875 3 388.5710937380791 MULTI CID FTMS 0 0 0 17591 336154.15625 0.2535917749092467 6 -0.6166229248046875 17 Unmodified _KGPHLRSKQL_ chr1:159836212-159837085|21|15.52|0.11|7.14|+|2|None,SLAMF8|1 3.5964929083625545 0.7100006075494749 3 {I|L} 1 9 9.7539 0.0 0.0 0.83891 0.0 0.0 1031.5973080388671 0.0 1031.5973080388671 0.0 2.110368441943784 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.83891 + + 20 + 1 0.905 145485.1 1.0 11885 5721 17591 HBL1_DMSO_200M_050219_1,17608 HBL1_DMSO_200M_050219_1,17608,KGPHLRSKQL False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_1 17609 84.231 410.0 593580.0 25 0 78552.0 -1 LALGWTNMLY 10 172 599.3026727812165 1196.590792629233 2 599.3033325076103 MULTI CID FTMS 0 0 0 17591 337150.9375 0.1099717096402664 -4 0.2754592895507812 18 Oxidation (M) _LALGWTNM(Oxidation (M))LY_ ENSG00000196689|ENST00000572705|TRPV1;ENST00000574085.5_1_17:3470111-3495610:-|nuORF;nc|ENSG00000196689|Q8NER1-3|TRPV1 25.399314129420983 0.3980215340001851 3 [{I|L}A]{I|L}DGE{[QG]|[NA]}{I|L}DG 11 -1 72.885 0.0 0.0 6.091 0.0 0.0 0.0 125.07256494693594 125.07256494693594 37.79432622017663 0.0 0.0 0.0 0 0.6549471895720984 2.0 1.6237125054200234 0.3054621874040891 [{I|L}A]{I|L}DGE{[QG]|[NA]}{I|L}DG 6.091 - 8916 + 1 0.905 179590.7 1.0 11886 5721 17591 HBL1_DMSO_200M_050219_1,17609 HBL1_DMSO_200M_050219_1,17609,LALGWTNMLY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17610 84.24 482.0 576500.0 25 0 51552.0 27398 PIKDSMFSL 9 202 519.2711558698423 0 519.2716552615166 PEAK CID FTMS 0 0 0 17591 293259.3125 0.1520960352882715 12 -1.17352294921875 19 Unmodified _PIKDSMFSL_ nc|ENSG00000143603|Q9UGI6-2|KCNN3 25.399314129420983 0.152124705672316 3 AD{I|L}A 4 8 15.522 0.0 0.0 1.4975 0.0 0.0 229.06630828169932 434.24656091861567 663.312869200315 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 AD{I|L}A 1.4975 - 474 + 1 0.905 210363.4 1.0 11887 5721 17591 HBL1_DMSO_200M_050219_1,17610 HBL1_DMSO_200M_050219_1,17610,PIKDSMFSL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17611 84.25 476.0 304670.0 25 0 21681.0 + 27091 PFEGLGKVYI 10 179 561.8128937624899 1121.6112345917795 2 561.8121826052666 MULTI CID FTMS 0 0 0 17591 227774.953125 0.4512942019258393 2 -0.2157974243164062 20 Unmodified _PFEGLGKVYI_ ENSG00000005884|ENST00000320031|ITGA3;ENST00000505306.5_1_17:48133647-48154208:+|nuORF;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;nc|ENSG00000005884|P26006-1|ITGA3 37.97399986684836 0.1789611706409123 3 VP{M(Oxidation (M))|F}[K{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L} 9 5 + 39.957 0.0 0.0 3.5624 3.5624 69.477 0.0 0.0 0.0 -1.338705064261724 0.7434979921513971 -1.338705064261724 0.8417702284195343 0 0.7059771852360797 1.2218487496163564 0.0 0.0 VP{M(Oxidation (M))|F}[K{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH{I|L}PVY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ENK{I|L}VY{I|L};VP{M(Oxidation (M))|F}[K{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{[QG]|[NA]}{I|L}PVY{I|L};{[DA]|[EG]}{I|L}[KG]{M(Oxidation (M))|F}PVY{I|L};VP{M(Oxidation (M))|F}[K{I|L}][R{M(Oxidation (M))|F}]C{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HHP{I|L}VY{I|L};{NN|[MP]|[D{I|L}]|[EV]}A[KG]{M(Oxidation (M))|F}PVY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EGGK{I|L}VY{I|L} 3.5624;3.4874;3.3497;3.0774;3.0394;2.7826;2.7357;2.6833;2.5355;2.5287 -;-;-;-;-;-;-;-;-;- 2680 + 1 0.905 114030.6 1.0 11888 5721 17591 HBL1_DMSO_200M_050219_1,17611 HBL1_DMSO_200M_050219_1,17611,PFEGLGKVYI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17613 84.254 1.1 54504000.0 25 0 17055000.0 + 23702 LTTLLVWRL 9 54 557.8503559949683 1113.6861590567364 2 557.8511840701103 MULTI CID FTMS 0 0 0 17612 39033960.0 0.9584387680898936 1 -0.1407394409179687 1 Unmodified _LTTLLVWRL_ REV__ENST00000592685.5_1_19:10574574-10577767:+|nuORF 10.073929032068715 0.563993802247229 3 [{I|L}T]{[RE]|[WV]}T{I|L}{I|L} 7 -1 28.204 0.0 0.0 2.5325 0.0 0.0 0.0 284.17087520347394 284.17087520347394 15.985994592184554 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T]{[RE]|[WV]}T{I|L}{I|L} 2.5325 - 28 1 0.905 51048.5 1.0 11889 5722 17612 HBL1_DMSO_200M_050219_1,17613 HBL1_DMSO_200M_050219_1,17613,LTTLLVWRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17614 84.258 218.0 553900.0 25 0 33472.0 + 17913 KQVEDDIQQLL 11 130 664.8570340670444 1327.6995152008888 2 664.8566161990166 MULTI CID FTMS 0 0 0 17612 582608.125 0.539216809150824 1 -0.1407394409179687 2 Unmodified _KQVEDDIQQLL_ ENSG00000161057|ENST00000292644|PSMC2;ENST00000460021.1_1_7:102994369-103002536:+|nuORF 81.9152076656658 0.0062322988290358 3 [AG]{I|L}DKDD{I|L}QQ{I|L}{I|L} 12 5 + 113.81 0.0 0.0 8.572 8.572 89.764 0.0 0.0 0.0 5.062794834608766 16.611814434466197 5.062794834608766 5.062794834608766 0 1.2302046884880935 2.0 1.9049471895720984 1.1549471895720984 [AG]{I|L}DKDD{I|L}QQ{I|L}{I|L};[Q{I|L}]DKDD{I|L}QQ{I|L}{I|L};[AG]QTNKD{I|L}QQ{I|L}{I|L};[AG]VEKDD{I|L}QQ{I|L}{I|L};[AG]{I|L}DKDD{I|L}[AG]Q{I|L}{I|L};[AG]{I|L}DKDD{I|L}Q[AG]{I|L}{I|L};[AG]{I|L}{I|L}[MN]D{I|L}QQ{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKDD{I|L}QQ{I|L}{I|L};[Q{I|L}]DKDD{I|L}Q[AG]{I|L}{I|L};[Q{I|L}]DKDD{I|L}[AG]Q{I|L}{I|L} 8.572;8.1907;8.1291;8.0987;7.8868;7.8868;7.8509;7.6206;7.5032;7.5032 -;-;-;-;-;-;-;-;-;- 4507 1 0.905 102092.5 1.0 11890 5722 17612 HBL1_DMSO_200M_050219_1,17614 HBL1_DMSO_200M_050219_1,17614,KQVEDDIQQLL True True KQVEDDIQQLL 84.257892 664.856616199017 19416604.0 17612.0 ENST00000460021.1_1_7:102994369-103002536:+|nuORF;;ENSG00000161057|ENST00000292644|PSMC2 9.378969192504885 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17615 84.259 31.0 2625900.0 25 0 368080.0 + 9870 FPFKPPSI 8 83 466.7657004369864 931.5168479407728 2 466.7660400271416 MULTI CID FTMS 0 0 0 17612 1710140.25 0.4207332520843501 -3 0.2322998046875 3 Unmodified _FPFKPPSI_ ENSG00000160087|ENST00000349431|UBE2J2;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2 36.12702656103203 0.299085846329477 3 {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPPS{I|L} 8 0 + 60.47 0.0 0.0 6.4915 6.4915 87.16 0.0 0.0 0.0 46.49034195086038 12.483922607286466 12.483922607286466 7.257724967479859 0 0.805462187404089 0.0 0.0 0.0 + + {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPPS{I|L};{M(Oxidation (M))|F}{I|L}MKPPS{I|L};{M(Oxidation (M))|F}[HK][HV][HK] 6.4915;5.7124;0.42322 +;-;- + 106 + 1 0.905 66433.8 1.0 11891 5722 17612 HBL1_DMSO_200M_050219_1,17615 HBL1_DMSO_200M_050219_1,17615,FPFKPPSI False True FPFKPPSI 84.259071 466.766040027142 276605216.0 17612.0 nc|ENSG00000160087|Q8N2K1-2|UBE2J2;;ENSG00000160087|ENST00000349431|UBE2J2;;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;;nc|ENSG00000160087|Q8N2K1-3|UBE2J2 6.676445960998535 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17616 84.261 105.0 432060.0 25 0 151180.0 + 30435 RDLKDRLPLSL 11 62 663.3981260393479 1324.7816991454956 2 663.3983032107353 MULTI CID FTMS 0 0 0 17612 958645.375 1.0 0 0.0 4 Unmodified _RDLKDRLPLSL_ REV__ENST00000438380.1_1_9:127533958-127535075:+|nuORF 1.0714618166137932 0.8700927088084459 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 0.905 51631.4 1.0 11892 5722 17612 HBL1_DMSO_200M_050219_1,17616 HBL1_DMSO_200M_050219_1,17616,RDLKDRLPLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17617 84.263 41.0 503550.0 25 0 36519.0 -1 ITMCRMRAR 9 42 577.2924866293827 1152.5704203255652 2 577.2925903201103 MULTI CID FTMS 0 0 0 17612 975711.0625 1.0 0 0.0 5 Oxidation (M) _ITM(Oxidation (M))CRMRAR_ nc|ENSG00000174844|Q6ZR08|DNAH12 4.3292370932331545 0.7635526921153418 3 T 1 -1 3.4949 0.0 0.0 0.30322 0.0 0.0 966.4334096827904 82.06689630679921 1048.5003059895894 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.30322 + + 4 + 1 0.905 22216.0 1.0 11893 5722 17612 HBL1_DMSO_200M_050219_1,17617 HBL1_DMSO_200M_050219_1,17617,ITMCRMRAR False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17618 84.265 124.0 779890.0 25 0 72550.0 + -1 LGSMCCGCAPL 11 133 535.7127433819123 1069.4109338306246 2 535.7128173708916 MULTI CID FTMS 0 0 0 17612 744619.375 1.0 0 0.0 6 Oxidation (M) _LGSM(Oxidation (M))CCGCAPL_ REV__ENST00000394906.6_1_17:27206365-27206722:-|nuORF 14.838274106304384 0.7264935675211688 3 {I|L}D 2 -1 27.352 0.0 0.0 2.5577 0.0 0.0 0.0 838.2762084432379 838.2762084432379 2.580331265344867 0.0 0.0 0.0 0 0.0 0.638272163982407 0.0 0.0 {I|L}D 2.5577 - 1369 + 1 0.905 79770.5 1.0 11894 5722 17612 HBL1_DMSO_200M_050219_1,17618 HBL1_DMSO_200M_050219_1,17618,LGSMCCGCAPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17619 84.271 350.0 340000.0 25 0 35002.0 + 2287 AQIDDDVFDKI 11 134 639.8141284874744 1277.6137040417486 2 639.8147460818291 MULTI CID FTMS 0 0 0 17612 434329.1875 0.6086087549240109 1 -0.1407394409179687 7 Unmodified _AQIDDDVFDKI_ ENSG00000109805|ENST00000251496|NCAPG;ENST00000513226.1_1_4:17812700-17814869:+|nuORF 64.69154705217129 0.0501048056983406 3 [QA]{I|L}DDDV{M(Oxidation (M))|F}DK{I|L} 11 0 + 96.492 0.0 0.0 7.5525 7.5525 89.164 0.0 0.0 0.0 16.228152129185816 6.28388930050312 6.28388930050312 6.28388930050312 0 1.579689690656103 0.8860566476931632 1.7302046884880935 0.1861818737241735 + + [QA]{I|L}DDDV{M(Oxidation (M))|F}DK{I|L};[QA]{I|L}DDDV{M(Oxidation (M))|F}D{I|L}K;[QA]{I|L}DDP[YT]DK{I|L};[QA]{I|L}DDP[YT]D{I|L}K;[QA]{I|L}D[YN]DK{I|L}[QA];[QA][QP]Y[C(Carbamidomethyl (C))R]DK{I|L};[QA]{I|L}DD[{M(Oxidation (M))|F}V][R{M(Oxidation (M))|F}][PA];[QA]VE[YN]DK{I|L}[QA];[QA][YN]D{I|L}DK{I|L}[QA];[QA][YN]DD{I|L}K{I|L}[QA] 7.5525;7.0607;5.5967;5.1048;3.0139;2.4757;2.4533;2.3869;2.2173;2.0795 +;-;-;-;-;-;-;-;-;- + 1933 + 1 0.905 96053.5 1.0 11895 5722 17612 HBL1_DMSO_200M_050219_1,17619 HBL1_DMSO_200M_050219_1,17619,AQIDDDVFDKI True True AQIDDDVFDKI 84.271425 639.814746081829 14257825.0 17612.0 ENST00000513226.1_1_4:17812700-17814869:+|nuORF;;ENSG00000109805|ENST00000251496|NCAPG 5.798969705899556 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17620 84.278 374.0 207170.0 25 0 22149.0 22291 LPRWFREAPVL 11 116 692.400881174131 1382.787209415062 2 692.3998290896416 MULTI CID FTMS 0 0 0 17612 348189.8125 1.0 0 0.0 8 Unmodified _LPRWFREAPVL_ ENSG00000213901|ENST00000409878|SLC23A3;nc|ENSG00000213901|Q6PIS1-2|SLC23A3;nc|ENSG00000213901|Q6PIS1-5|SLC23A3 5.731851221503515 0.8481046878870278 3 Q 1 11 13.843 0.0 0.0 1.0011 0.0 0.0 1236.7180088308803 0.0 1236.7180088308803 0.0 2.4225251881038545 0.0 0.0 0 0.0 0.0 0.0 0.2059771852360797 Q 1.0011 - 125 + 1 0.905 61514.5 1.0 11896 5722 17612 HBL1_DMSO_200M_050219_1,17620 HBL1_DMSO_200M_050219_1,17620,LPRWFREAPVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17621 84.285 385.0 309970.0 25 0 45239.0 19321 LELTFRLFELA 11 127 676.3875549242252 1350.7605569152504 2 676.3875610232353 MULTI CID FTMS 0 0 0 17612 327426.59375 0.8938218118212938 3 -0.2984542846679687 9 Unmodified _LELTFRLFELA_ ENSG00000131650|ENST00000303746|KREMEN2;nc|ENSG00000131650|Q8NCW0-2|KREMEN2;nc|ENSG00000131650|Q8NCW0-3|KREMEN2;nc|ENSG00000131650|Q8NCW0-4|KREMEN2;nc|ENSG00000131650|Q8NCW0-5|KREMEN2;nc|ENSG00000131650|Q8NCW0-6|KREMEN2 5.731851221503515 0.8481046878870278 3 {I|L} 1 10 11.42 0.0 0.0 0.84545 0.0 0.0 1219.665431648452 0.0 1219.665431648452 0.0 2.546529690455319 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.84545 + + 206 + 1 0.905 96917.2 1.0 11897 5722 17612 HBL1_DMSO_200M_050219_1,17621 HBL1_DMSO_200M_050219_1,17621,LELTFRLFELA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17622 84.295 559.0 675980.0 25 0 153950.0 27506 PKLLVIFEDRL 11 186 448.2765468386336 1341.807811116101 3 448.2768432497978 MULTI CID FTMS 0 0 0 17612 263845.3125 0.6180556536677613 -1 0.0750579833984375 10 Unmodified _PKLLVIFEDRL_ ENST00000370689.6_1_1:84701395-84701596:+|nuORF 2.2527281973983926 0.8645194170429107 3 [YV]W 3 10 21.796 0.0 0.0 1.6243 0.0 0.0 0.0 890.580735270651 890.580735270651 4.484329389048469 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YV]W 1.6243 - 176 1 0.905 296116.6 1.0 11898 5722 17612 HBL1_DMSO_200M_050219_1,17622 HBL1_DMSO_200M_050219_1,17622,PKLLVIFEDRL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17623 84.302 424.0 221950.0 25 0 58557.0 + -1 ELKIKVVQCLL 11 119 671.911583376296 1341.808613819392 2 671.9114868044853 MULTI CID FTMS 0 0 0 17612 247862.640625 0.562335463300464 -1 0.0750579833984375 11 Carbamidomethyl (C) _ELKIKVVQC(Carbamidomethyl (C))LL_ REV__ENSG00000118900|ENST00000262376|UBN1;REV__nc|ENSG00000118900|Q9NPG3-2|UBN1 2.735195868890462 0.8622431031272658 3 [{I|L}P]QAM 5 -1 13.161 0.0 0.0 0.98081 0.0 0.0 0.0 798.4943187356606 798.4943187356606 2.4472749489669354 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [{I|L}P]QAM 0.98081 - 119 1 0.905 86634.2 1.0 11899 5722 17612 HBL1_DMSO_200M_050219_1,17623 HBL1_DMSO_200M_050219_1,17623,ELKIKVVQCLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17624 84.31 437.0 211810.0 25 0 18948.0 -1 0 108 997.4474370078892 1992.880321082578 2 997.450732409954 MULTI CID FTMS 0 0 0 17612 203920.390625 0.6158108982949119 3 -0.2984542846679687 12 3 [TA]{I|L}D{I|L}{I|L} 6 -1 38.862 0.0 0.0 1.95 0.0 0.0 0.0 1363.491289286175 1363.491289286175 8.104188239328508 0.0 0.0 0.0 0 1.0 0.0 1.297106248532352 0.0 [TA]{I|L}D{I|L}{I|L} 1.95 - 4925 1 0.905 64814.3 1.0 11900 5722 17612 HBL1_DMSO_200M_050219_1,17624 HBL1_DMSO_200M_050219_1,17624, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17625 84.315 239.0 725590.0 25 0 73088.0 + -1 PDLLAKMSI 9 180 502.2771328501422 0 502.2770263552666 PEAK CID FTMS 0 0 0 17612 176971.59375 0.4513437282321605 -3 0.2322998046875 13 Oxidation (M) _PDLLAKM(Oxidation (M))SI_ REV__ENSG00000130147|ENST00000392011|SH3BP4;REV__nc|ENSG00000130147|Q9P0V3-2|SH3BP4 15.847184025352805 0.2451986057151378 3 AN 2 -1 9.2525 0.0 0.0 0.92291 0.0 0.0 492.2962262942313 322.14072595767817 814.4369522519095 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 AN 0.92291 - 501 + 1 0.905 132253.4 1.0 11901 5722 17612 HBL1_DMSO_200M_050219_1,17625 HBL1_DMSO_200M_050219_1,17625,PDLLAKMSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17626 84.327 631.0 393360.0 25 0 60777.0 40462 VIMTSSYL 8 207 457.23986420166 0 457.2377807497978 PEAK CID FTMS 0 0 0 17612 176329.3125 1.0 0 0.0 14 Unmodified _VIMTSSYL_ nc|ENSG00000221883|Q8N7S6|ARIH2OS 14.581692164780916 0.4900557725783909 3 PD{I|L} 3 7 14.693 0.0 0.0 1.6102 0.0 0.0 95.05625320625116 489.2233675592407 584.2796207654918 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PD{I|L} 1.6102 - 153 + 1 0.905 189979.3 1.0 11902 5722 17612 HBL1_DMSO_200M_050219_1,17626 HBL1_DMSO_200M_050219_1,17626,VIMTSSYL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17627 84.338 650.0 382490.0 25 0 180510.0 -1 0 58 1102.5530292272954 0 1102.558642566204 PEAK CID FTMS 0 0 0 17612 146598.125 0.9948887024014256 2 -0.2380294799804687 15 3 D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DD 5 -1 16.026 0.0 0.0 0.72742 0.0 0.0 1232.6404862820748 365.2306307428344 1597.8711170249092 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DD 0.72742 - 105 + 1 0.905 161020.9 1.0 11903 5722 17612 HBL1_DMSO_200M_050219_1,17627 HBL1_DMSO_200M_050219_1,17627, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17628 84.348 565.0 59388.0 25 0 6250.6 -1 0 67 835.1616699099541 0 835.1616699099541 PEAK CID FTMS 0 0 0 -1 0 16 3 T{I|L}{I|L} 3 -1 14.693 0.0 0.0 0.8807 0.0 0.0 1079.9822620837767 258.0889071100219 1338.0711691937986 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L}{I|L} 0.8807 - 75 + 1 0.905 31329.1 1.0 11904 5722 17612 HBL1_DMSO_200M_050219_1,17628 HBL1_DMSO_200M_050219_1,17628, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17629 84.358 537.0 322800.0 25 0 28631.0 + 26963 PEDELIQVTV 10 195 571.8008580608243 1141.5871631884486 2 571.8019897341728 MULTI CID FTMS 0 0 0 17612 162865.34375 0.5855225351348394 -1 0.0750579833984375 17 Unmodified _PEDELIQVTV_ ENSG00000111731|ENST00000446597|C2CD5;nc|ENSG00000111731|Q86YS7-2|C2CD5;nc|ENSG00000111731|Q86YS7-4|C2CD5;nc|ENSG00000111731|Q86YS7-5|C2CD5;nc|ENSG00000111731|Q86YS7|C2CD5 56.17704186161178 0.0466144807663799 3 [EP]DE{I|L}{I|L}S{I|L}AR 10 4 + 53.178 0.0 0.0 4.6583 4.6583 80.819 0.0 0.0 0.0 6.21919759109641 25.88751521264573 6.21919759109641 6.947247956490834 0 0.283674643474364 0.2839966563652008 1.9876954943324543 0.0 [EP]DE{I|L}{I|L}S{I|L}AR;{NN|[MP]|[D{I|L}]|[EV]}E[EP]{I|L}S{I|L}AR;[DP]EE{I|L}{I|L}S{I|L}AR;[EP]DE{I|L}S{I|L}{I|L}AR;{[TV]|[{I|L}S]}H[MD]{I|L}S{I|L}AR;{NN|[MP]|[D{I|L}]|[EV]}M[HS]{I|L}S{I|L}AR;{NN|[MP]|[D{I|L}]|[EV]}E[EP]S{I|L}{I|L}AR;[DP]EE{I|L}S{I|L}{I|L}AR;{[TV]|[{I|L}S]}H[MD]S{I|L}{I|L}AR;{[QN]|[E{I|L}]|[KN]}D[EP]{I|L}S{I|L}AR 4.6583;4.0497;4.0368;3.9839;3.7748;3.4374;3.3754;3.3625;3.1005;3.0545 -;-;-;-;-;-;-;-;-;- 3648 1 0.905 132741.5 1.0 11905 5722 17612 HBL1_DMSO_200M_050219_1,17629 HBL1_DMSO_200M_050219_1,17629,PEDELIQVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17630 84.369 573.0 493580.0 25 0 42024.0 + 39902 VFPPSFREL 9 206 546.2988014453283 0 546.2981445193291 PEAK CID FTMS 0 0 0 17612 119339.0 0.4371258341806632 2 -0.2380294799804687 18 Unmodified _VFPPSFREL_ ENSG00000101052|ENST00000373030|IFT52 41.8396318013385 0.053988301646488 3 PPS 3 6 22.976 0.0 0.0 2.1068 0.0 0.0 246.138021129644 560.2866915338499 806.4247126634939 0.0 0.0 0.0 0.0 0 0.6421590589602533 0.0 0.6861818737241735 0.0 + PPS 2.1068 + + 484 + 1 0.905 225026.4 1.0 11906 5722 17612 HBL1_DMSO_200M_050219_1,17630 HBL1_DMSO_200M_050219_1,17630,VFPPSFREL True True VFPPSFREL 84.36886 546.298144519329 4212325.0 17612.0 ENSG00000101052|ENST00000373030|IFT52 5.637775580088298 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17631 84.379 599.0 37388.0 25 0 2231.4 31723 RRRRRRRRRRP 11 58 839.0447265505791 0 839.0447265505791 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _RRRRRRRRRRP_ ENST00000497336.1_1_X:48316945-48325440:-|nuORF 0.0 0.4761840153648598 3 C 1 11 3.9794 0.0 0.0 0.23742 0.0 0.0 633.4590076892456 936.5873507135374 1570.046358402783 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.23742 - 6 + 1 0.905 22877.8 1.0 11907 5722 17612 HBL1_DMSO_200M_050219_1,17631 HBL1_DMSO_200M_050219_1,17631,RRRRRRRRRRP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17632 84.39 629.0 134190.0 25 0 8956.0 + -1 MLDGWSRRVT 10 141 618.8096801638603 0 618.8096801638603 PEAK CID FTMS 0 0 0 -1 0 20 Oxidation (M) _M(Oxidation (M))LDGWSRRVT_ REV__ENST00000606011.1_1_13:96328766-96328880:-|nuORF 13.042465956692816 0.351733747982019 3 T 1 -1 9.0013 0.0 0.0 0.7285 0.0 0.0 1017.4781269519408 114.05636774234608 1131.5344946942869 0.0 0.0 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 T 0.7285 + + 44 + 1 0.905 67729.6 1.0 11908 5722 17612 HBL1_DMSO_200M_050219_1,17632 HBL1_DMSO_200M_050219_1,17632,MLDGWSRRVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17634 84.395 4.6 12336000.0 25 0 1543800.0 + 9877 FPFLVQSK 8 72 483.2764472907161 964.5383416482322 2 483.2765991091728 MULTI CID FTMS 0 0 0 17633 12510197.0 0.8292550338003934 9 -0.8013076782226562 1 Unmodified _FPFLVQSK_ REV__ENSG00000254221|ENST00000523390|PCDHGB1;REV__nc|ENSG00000254221|Q9Y5G3-2|PCDHGB1 28.486842064014134 0.4448922141344407 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GK{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E 8 -1 + 48.906 0.0 0.0 5.0704 5.0704 86.186 0.0 0.0 0.0 11.32023214705405 7.791229100142445 7.791229100142445 12.262357117701086 0 0.5 2.0 0.7742275032520141 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GK{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;{M(Oxidation (M))|F}[{I|L}T]TG{I|L}[WK];[KG]{M(Oxidation (M))|F}{I|L}GT[VP]{M(Oxidation (M))|F};[KG]{M(Oxidation (M))|F}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;[KG]{M(Oxidation (M))|F}P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E 5.0704;3.799;3.2236;2.2999;1.9879 -;-;-;-;- 163 1 0.906 48213.0 1.0 11909 5723 17633 HBL1_DMSO_200M_050219_1,17634 HBL1_DMSO_200M_050219_1,17634,FPFLVQSK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17635 84.396 3.8 48813000.0 25 0 7874400.0 + 18686 LAIWEASL 8 102 451.7527689299804 901.4909849267608 2 451.7528869509697 MULTI CID FTMS 0 0 0 17633 15398923.0 0.1965513772220538 37 -3.6408538818359375 2 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 74.39630413441286 0.1057069479668299 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 5 + 63.835 0.0 0.0 7.081 7.081 79.49 0.0 0.0 0.0 3.8907562519182193 0.3959062302381255 0.3959062302381255 0.3959062302381255 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}PASA{I|L}{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APSA{I|L}{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MPASA{I|L}{I|L};[{I|L}A]{M(Oxidation (M))|F}ASP{I|L}A{I|L};[{I|L}A]{I|L}[WE]AS{I|L};[{I|L}A]{M(Oxidation (M))|F}ASPA{I|L}{I|L};[{I|L}A]{M(Oxidation (M))|F}PA{I|L}AS{I|L} 7.081;7.0371;6.7471;6.7032;6.6494;6.6055;6.3325;6.3028;6.2886;6.2491 -;-;-;-;-;-;-;+;-;- + 1344 1 0.906 148680.3 1.0 11910 5723 17633 HBL1_DMSO_200M_050219_1,17635 HBL1_DMSO_200M_050219_1,17635,LAIWEASL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17636 84.397 8.8 6716000.0 25 0 805600.0 + 12860 GVVPQLVKL 9 70 476.8130743891318 951.6115958450636 2 476.8133422732353 MULTI CID FTMS 0 0 0 17633 5958093.0 0.0994751806119187 -3 0.2533340454101562 3 Unmodified _GVVPQLVKL_ ENSG00000182481|ENST00000330459|KPNA2 42.09456458481378 0.0639583784996157 3 [VG]VPQ[{I|L}V]K{I|L} 9 0 + 58.236 0.0 0.0 6.1198 6.1198 88.085 0.0 0.0 0.0 26.51023442440468 4.7363856585885244 4.7363856585885244 9.208187539523747 0 0.7742275032520141 2.0 0.0 0.805462187404089 + + [VG]VPQ[{I|L}V]K{I|L};[VG]VP[AG][{I|L}V]K{I|L} 6.1198;5.1521 +;- + 138 + 1 0.906 50306.0 1.0 11911 5723 17633 HBL1_DMSO_200M_050219_1,17636 HBL1_DMSO_200M_050219_1,17636,GVVPQLVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17637 84.398 24.0 1300400.0 25 0 82865.0 + 45124 YQAPDIDVQL 10 57 581.2920547809874 1160.5695566287748 2 581.2930175662041 MULTI CID FTMS 0 0 0 17633 1592734.875 0.0406440932082086 12 -1.0825729370117188 4 Unmodified _YQAPDIDVQL_ ENSG00000105373|ENST00000246802|NOP53;ENST00000600410.5_1_19:48257983-48259211:+|nuORF 19.361941925380144 0.5226674314761524 3 D{I|L}[DP]CQ{I|L} 7 6 22.172 0.0 0.0 1.9104 0.0 0.0 358.2197977627541 0.0 358.2197977627541 0.0 11.714044957578976 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 D{I|L}[DP]CQ{I|L} 1.9104 - 98 + 1 0.906 31338.5 1.0 11912 5723 17633 HBL1_DMSO_200M_050219_1,17637 HBL1_DMSO_200M_050219_1,17637,YQAPDIDVQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17638 84.399 32.0 1268100.0 25 0 132960.0 + 39682 VEELPIGLEA 10 63 535.2927252389206 1068.5708975446412 2 535.2927734255791 MULTI CID FTMS 0 0 0 17633 1479614.5 0.7000255836121057 -2 0.2157974243164062 5 Unmodified _VEELPIGLEA_ REV__ENSG00000067064|ENST00000381344|IDI1;REV__ENST00000435551.1_1_2:139065056-139065290:+|nuORF;REV__nc|ENSG00000067064|Q13907|IDI1 29.081581746732265 0.3152867722954398 3 [DP]E{I|L}{I|L}{I|L}G{I|L}{[CP]|[EA]} 10 -1 + 52.096 0.0 0.0 4.8753 4.8753 72.133 0.0 0.0 0.0 0.2118929906993827 3.7751372576825295 0.2118929906993827 0.2118929906993827 0 0.3807196863200844 0.0 0.6861818737241735 0.0 [DP]E{I|L}{I|L}{I|L}G{I|L}{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}[DP]{I|L}{I|L}G{I|L}{[CP]|[EA]};[DP]E{I|L}{I|L}AV{I|L}{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}[DP]{I|L}AV{I|L}{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}{I|L}[DP]{I|L}G{I|L}{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}{I|L}[DP]AV{I|L}{[CP]|[EA]};{I|L}{I|L}E[DP]{I|L}G{I|L}{[CP]|[EA]};{I|L}{I|L}E[DP]AV{I|L}{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}[PS]{I|L}[TP]{I|L}{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}{I|L}[PS][TP]{I|L}{[CP]|[EA]} 4.8753;4.8554;4.5936;4.5737;4.2174;3.9357;3.7167;3.4349;2.1768;2.1768 -;-;-;-;-;-;-;-;-;- 221 1 0.906 38923.8 1.0 11913 5723 17633 HBL1_DMSO_200M_050219_1,17638 HBL1_DMSO_200M_050219_1,17638,VEELPIGLEA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17639 84.4 48.0 1491600.0 25 0 356870.0 41119 VNSLFNRSFN 10 78 399.8715290050294 1196.5927576152883 3 399.8716918826103 MULTI CID FTMS 0 0 0 17633 1351616.125 1.0 0 0.0 6 Unmodified _VNSLFNRSFN_ ENSG00000079101|ENST00000692774|CLUL1 12.240655878213236 0.6421556946785427 3 [{I|L}A][QT]{I|L}{M(Oxidation (M))|F} 6 8 30.947 0.0 0.0 2.5863 0.0 0.0 0.0 520.1889215769675 520.1889215769675 17.452359395051715 0.0 0.0 0.0 0 0.0 2.0 0.7302046884880937 0.0 [{I|L}A][QT]{I|L}{M(Oxidation (M))|F} 2.5863 - 329 1 0.906 59494.9 1.0 11914 5723 17633 HBL1_DMSO_200M_050219_1,17639 HBL1_DMSO_200M_050219_1,17639,VNSLFNRSFN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17640 84.402 42.0 1223900.0 25 0 167450.0 + 3881 DALDHVIDI 9 81 505.76142587625526 0 505.7614318728447 PEAK CID FTMS 0 0 0 17633 1325243.25 0.7521455091853099 2 -0.15771484375 7 Unmodified _DALDHVIDI_ ENSG00000159069|ENST00000325285|FBXW5;ENST00000459905.5_1_9:139835382-139837220:-|nuORF;ENST00000483559.5_1_9:139835382-139837095:-|nuORF 39.957323273325 0.0619271662220897 3 DAD{I|L}{I|L}V 6 5 34.558 0.0 0.0 3.4232 0.0 0.0 131.09376132106678 249.0626009576781 380.15636227874495 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 DAD{I|L}{I|L}V 3.4232 - 362 + 1 0.906 46674.6 1.0 11915 5723 17633 HBL1_DMSO_200M_050219_1,17640 HBL1_DMSO_200M_050219_1,17640,DALDHVIDI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17641 84.408 338.0 546570.0 25 0 22572.0 + 30665 RFPEELTQTF 10 148 634.3192064214766 1266.623859909753 2 634.3203002810478 MULTI CID FTMS 0 0 0 17633 479024.21875 0.5858180423751886 12 -1.0825729370117188 8 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 55.23464941255904 0.0494277333541689 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ERE{I|L}TQT{M(Oxidation (M))|F} 10 2 + 81.261 0.0 0.0 6.4156 6.4156 77.923 0.0 0.0 0.0 0.5159582388735657 11.69283564263057 0.5159582388735657 0.5159582388735657 0 1.0994850021680094 0.8860566476931632 1.174742501084005 0.3494850021680094 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ERE{I|L}TQT{M(Oxidation (M))|F};[QT][SG]RE{I|L}TQT{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{[VA]|[{I|L}G]}E{I|L}TQT{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}M{[VA]|[{I|L}G]}E{I|L}TQT{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}MRE{I|L}TQT{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}T{[TV]|[{I|L}S]}E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ERT{I|L}EQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[TP]E{I|L}TQT{M(Oxidation (M))|F};[QT][SG]RT{I|L}EQT{M(Oxidation (M))|F} 6.4156;6.3748;6.2819;6.2077;6.1237;5.9812;5.886;5.8012;5.7782;5.7605 -;-;-;-;-;-;-;-;-;- 9730 1 0.906 139838.9 1.0 11916 5723 17633 HBL1_DMSO_200M_050219_1,17641 HBL1_DMSO_200M_050219_1,17641,RFPEELTQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17642 84.414 370.0 630310.0 25 0 28577.0 + + 20963 SQMPTVIYV 9 127 1037.533191239784 1036.525914773184 1 1037.531054675579 MULTI CID FTMS 0 0 0 17633 501066.3125 0.0314170888915724 15 -1.3704986572265625 9 Unmodified _LNLAECLYV_ ENSG00000121931|ENST00000369763|LRIF1 65.23502041540118 0.0231836506122253 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[DG]M{I|L}YV 9 -1 + 73.981 0.0 0.0 7.1374 7.1374 84.643 0.0 0.0 0.0 11.187718690714377 14.973024840566469 11.187718690714377 3.26606256887672 0 0.6549471895720985 1.6989700043360187 1.4802046884880935 0.8807196863200843 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[DG]M{I|L}YV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[DG]{I|L}MYV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NS{[QS]|[NT]}YV;{[QV]|[N{I|L}]|[RA]|[KV]}T[PS]M{I|L}YV;{[QV]|[N{I|L}]|[RA]|[KV]}T[PS]{I|L}MYV;[TP]V{[QS]|[NT]}M{I|L}YV;{[QV]|[N{I|L}]|[RA]|[KV]}MADV{I|L}YV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NT[NS]YV;[TP]V{I|L}{[QS]|[NT]}MYV;{[QV]|[N{I|L}]|[RA]|[KV]}MT[PS]{I|L}YV 7.1374;6.8223;6.4838;6.3998;6.0847;6.0581;6.0521;6.0235;5.9608;5.815 -;-;-;-;-;-;-;-;-;- 5020 1 0.906 146502.6 1.0 11917 5723 17633 HBL1_DMSO_200M_050219_1,17642 HBL1_DMSO_200M_050219_1,17642,LNLAECLYV False False SQMPTVIYV 84.414499 1037.53105467558 0.0 17633.0 ENSG00000121931|ENST00000369763|LRIF1 6.990407307942708 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17643 84.422 435.0 529700.0 25 0 80715.0 + 33871 SLFGGSVKL 9 149 454.26573028946063 906.5169076457212 2 454.2656432986259 MULTI CID FTMS 0 0 0 17633 443112.03125 0.532786450986796 -2 0.2157974243164062 10 Unmodified _SLFGGSVKL_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000477798.5_1_3:33840175-33866683:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 38.17557092003332 0.0854718145212029 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}NSVK{I|L} 8 2 + 57.648 0.0 0.0 6.3593 6.3593 77.741 0.0 0.0 0.0 26.98970004336018 7.659167939666318 7.659167939666318 0.5115252244738144 0 0.4247425010840047 2.0 0.6307196863200843 0.2302046884880938 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}NSVK{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}GGSVK{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}NSV{I|L}K;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}GGSV{I|L}K;{[TV]|[{I|L}S]}{I|L}[WY]{I|L}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}NS[K{I|L}]V;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}GGS[K{I|L}]V;{[TV]|[{I|L}S]}{I|L}[YK][NG]{I|L};{[TV]|[{I|L}S]}{I|L}[YK]{[QG]|[NA]}V;{[TV]|[{I|L}S]}{I|L}[YK]{[NV]|[RG]}A 6.3593;6.3029;5.5144;5.458;3.6867;3.6665;3.6101;2.4632;1.7607;1.7252 -;+;-;-;-;-;-;-;-;- + 808 + 1 0.906 178537.5 1.0 11918 5723 17633 HBL1_DMSO_200M_050219_1,17643 HBL1_DMSO_200M_050219_1,17643,SLFGGSVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17644 84.429 373.0 353420.0 25 0 33714.0 -1 0 90 787.3613939730383 2359.0623525193146 3 787.3633300662041 MULTI CID FTMS 0 0 0 17633 426572.21875 1.0 0 0.0 11 3 [YQ]{I|L}E[HA]{I|L}{I|L}{I|L}N 10 -1 53.461 0.0 0.0 2.2662 0.0 0.0 0.0 1161.3984863702776 1161.3984863702776 32.124759215276626 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.3807196863200844 [YQ]{I|L}E[HA]{I|L}{I|L}{I|L}N 2.2662 - 1958 1 0.906 100398.8 1.0 11919 5723 17633 HBL1_DMSO_200M_050219_1,17644 HBL1_DMSO_200M_050219_1,17644, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17645 84.431 65.0 513720.0 25 0 45937.0 + 44160 YLDPSVLSGV 10 83 525.2806023738096 1048.5466518144192 2 525.2818481326103 MULTI CID FTMS 0 0 0 17633 355405.4375 1.0 0 0.0 12 Unmodified _YLDPSVLSGV_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 15.847184025352805 0.5816416552707754 3 V 1 9 13.979 0.0 0.0 1.3332 0.0 0.0 931.4669302951794 0.0 931.4669302951794 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.3332 + + 32 + 1 0.906 33637.3 1.0 11920 5723 17633 HBL1_DMSO_200M_050219_1,17645 HBL1_DMSO_200M_050219_1,17645,YLDPSVLSGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17646 84.438 444.0 361200.0 25 0 74632.0 + 45718 YYFDSYAHF 9 160 606.7535700147208 1211.4925870962416 2 606.7535888552666 MULTI CID FTMS 0 0 0 17633 243771.359375 1.0 0 0.0 13 Unmodified _YYFDSYAHF_ ENSG00000111218|ENST00000382622|PRMT8;ENSG00000126457|ENST00000454376|PRMT1;ENST00000261252.4_1_12:3649876-3661973:+|nuORF;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;ENST00000543701.5_1_12:3600779-3659332:+|nuORF;nc|ENSG00000111218|Q9NR22-2|PRMT8;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 77.98433622928108 0.0180125044636492 3 YY{M(Oxidation (M))|F}DSYA{M(Oxidation (M))|F}H 9 2 + 91.042 0.0 0.0 7.5149 7.5149 94.346 0.0 0.0 0.0 72.00872436502529 6.61159286695316 6.61159286695316 14.851453248366797 0 1.048455006504028 2.0 1.0994850021680094 0.0 YY{M(Oxidation (M))|F}DSYA{M(Oxidation (M))|F}H;YY{M(Oxidation (M))|F}DQQYW;YY{M(Oxidation (M))|F}DQQ{[{M(Oxidation (M))|F}C]|[YS]}V;YY[WY]YA{M(Oxidation (M))|F}H;YY{M(Oxidation (M))|F}DQQ[DP]H;YY{M(Oxidation (M))|F}D[YV]DD{I|L};{[QN]|[E{I|L}]|[KN]}MYSD[NG]{[{M(Oxidation (M))|F}H]|[RQ]};[HA]R[DG]SD[NG]{[{M(Oxidation (M))|F}H]|[RQ]};{[CT]|[{M(Oxidation (M))|F}G]}YQQD[NG]{[{M(Oxidation (M))|F}H]|[RQ]};Y[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][VP]DGA{M(Oxidation (M))|F}H 7.5149;6.289;4.7773;4.7734;4.5737;4.2766;2.2541;1.2778;1.2573;1.1387 -;-;-;-;-;-;-;-;-;- 1152 + 1 0.906 118155.9 1.0 11921 5723 17633 HBL1_DMSO_200M_050219_1,17646 HBL1_DMSO_200M_050219_1,17646,YYFDSYAHF True True YYFDSYAHF 84.438455 606.753588855267 2883828.75 17633.0 ENST00000543701.5_1_12:3600779-3659332:+|nuORF;;ENSG00000126457|ENST00000454376|PRMT1;;ENST00000261252.4_1_12:3649876-3661973:+|nuORF;;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;;nc|ENSG00000126457|Q99873-5|PRMT1;;nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000111218|Q9NR22-2|PRMT8;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENSG00000111218|ENST00000382622|PRMT8 7.266659577687581 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17647 84.447 486.0 147140.0 25 0 20950.0 + 7875 ELLRQKWLTWL 11 90 743.4346809817043 1484.8548090302086 2 743.4369994997978 MULTI CID FTMS 0 0 0 17633 169234.484375 0.5341149886544404 -4 0.3730392456054687 14 Unmodified _ELLRQKWLTWL_ REV__ENST00000559514.5_1_14:102825903-102829199:-|nuORF 0.4082653385326392 0.873221713011348 3 {I|L} 1 -1 10.596 0.0 0.0 0.7136 0.0 0.0 1353.7597447985663 0.0 1353.7597447985663 0.0 -0.8307429970912672 -0.8307429970912672 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.7136 + + 34 + 1 0.906 60704.1 1.0 11922 5723 17633 HBL1_DMSO_200M_050219_1,17647 HBL1_DMSO_200M_050219_1,17647,ELLRQKWLTWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17648 84.457 493.0 276350.0 25 0 17597.0 -1 LWRQPTLCL 9 169 593.8225332703377 1185.6305136074752 2 593.8237792849541 MULTI CID FTMS 0 0 0 17633 159425.140625 0.1351244735378647 23 -2.248985290527344 15 Carbamidomethyl (C) _LWRQPTLC(Carbamidomethyl (C))L_ ENST00000354955.4_1_1:203310784-203310904:-|nuORF 12.531546534597751 0.4974689918368763 3 W{I|L}PNC{M(Oxidation (M))|F} 6 -1 60.355 0.0 0.0 5.0905 0.0 0.0 0.0 422.26972376041255 422.26972376041255 39.18366291575822 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 W{I|L}PNC{M(Oxidation (M))|F} 5.0905 - 1517 + 1 0.906 105999.7 1.0 11923 5723 17633 HBL1_DMSO_200M_050219_1,17648 HBL1_DMSO_200M_050219_1,17648,LWRQPTLCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17649 84.465 463.0 75282.0 25 0 32019.0 + 19828 LHELHEKI 8 37 1018.5684870009576 1017.5612105343577 1 1018.123217761517 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _LHELHEKI_ REV__ENSG00000187545|ENST00000235347|PRAMEF10;REV__ENSG00000204479|ENST00000376098|PRAMEF17;REV__ENSG00000237700|ENST00000437300|PRAMEF33 2.059750862983233 0.8118298629782807 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 0.906 33165.6 1.0 11924 5723 17633 HBL1_DMSO_200M_050219_1,17649 HBL1_DMSO_200M_050219_1,17649,LHELHEKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17650 84.479 800.0 230160.0 25 0 24425.0 -1 IAFMSADW 8 200 319.4776221560376 0 319.4776183962822 PEAK CID FTMS 0 0 0 17633 134933.671875 0.5249063456875009 21 -2.057456970214844 17 Oxidation (M) _IAFM(Oxidation (M))SADW_ ENSG00000145685|ENST00000380345|LHFPL2 11.640296217721598 0.5231213682848052 3 A 1 -1 6.9897 0.0 0.0 1.0974 0.0 0.0 480.8139956775064 82.06698023013905 562.8809759076455 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.0974 + + 4 + 1 0.906 148463.4 0.9800000190734864 11925 5723 17633 HBL1_DMSO_200M_050219_1,17650 HBL1_DMSO_200M_050219_1,17650,IAFMSADW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17651 84.488 480.0 116190.0 25 0 15842.0 -1 0 71 1096.9813892186198 2191.94822550404 2 1097.489550769329 MULTI CID FTMS 0 0 0 17633 122624.15625 0.7484056932246027 -4 0.3730392456054687 18 3 [NP]N{I|L}{I|L} 5 -1 16.026 0.0 0.0 0.73112 0.0 0.0 0.0 1637.6177561039024 1637.6177561039024 2.314309196763702 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [NP]N{I|L}{I|L} 0.73112 - 86 1 0.906 50781.2 1.0 11926 5723 17633 HBL1_DMSO_200M_050219_1,17651 HBL1_DMSO_200M_050219_1,17651, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17653 84.492 11.0 3832500.0 25 0 611040.0 + 3014 AVITSGFVEAL 11 72 553.8082526999918 1105.6019524667836 2 553.8089477419853 MULTI CID FTMS 0 0 0 17652 3400024.0 0.1357431024026758 3 -0.3035354614257812 1 Unmodified _AVITSGFVEAL_ REV__ENST00000550663.1_1_12:45457440-45457707:-|nuORF 29.081581746732265 0.4093582134107448 3 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}DK 7 -1 51.19 0.0 0.0 4.6301 0.0 0.0 0.0 282.1451510065063 282.1451510065063 20.47228775315752 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}DK 4.6301 - 470 + 1 0.906 39674.7 1.0 11927 5724 17652 HBL1_DMSO_200M_050219_1,17653 HBL1_DMSO_200M_050219_1,17653,AVITSGFVEAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17654 84.493 8.8 6437300.0 25 0 1213000.0 + 4645 DAYVLPKLY 9 53 541.2999781941046 1080.585403455009 2 541.3003417849541 MULTI CID FTMS 0 0 0 17652 5485921.5 0.019379208379308 15 -1.432891845703125 2 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 37.97399986684836 0.0865783450051559 3 {[DA]|[EG]}YV{I|L}PK{I|L}Y 9 0 {[DA]|[EG]}Y + + 35.17 21.427 6.1372 3.2547 3.2547 50.673 0.0 0.0 0.0 0.0 13.742982472255465 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L}Y 3.2547 + + 57 + 1 0.906 49084.6 1.0 11928 5724 17652 HBL1_DMSO_200M_050219_1,17654 HBL1_DMSO_200M_050219_1,17654,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17655 84.494 8.6 3032000.0 25 0 386280.0 + 42784 VVISSDGQFAL 11 55 568.3032507927411 1134.591948652282 2 568.3033935427666 MULTI CID FTMS 0 0 0 17652 4873015.5 0.7219338372631787 -1 0.0972900390625 3 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 13.90604991867851 0.7458848613461305 3 {I|L} 1 10 13.979 0.0 0.0 1.2321 0.0 0.0 1003.4967318327492 0.0 1003.4967318327492 0.0 -4.22508200162774 -4.22508200162774 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2321 + + 10 + 1 0.906 28094.6 1.0 11929 5724 17652 HBL1_DMSO_200M_050219_1,17655 HBL1_DMSO_200M_050219_1,17655,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17656 84.495 13.0 3506300.0 25 0 378000.0 + 34497 SMQDTLESL 9 75 512.236239987042 1022.457927040884 2 512.2374145388603 MULTI CID FTMS 0 0 0 17652 3259508.0 0.6016834728136004 1 -0.0604248046875 4 Unmodified _SMQDTLESL_ REV__ENSG00000173610|ENST00000286604|UGT2A1;REV__nc|ENSG00000173610|P0DTE4-1|UGT2A1;REV__nc|ENSG00000173610|P0DTE4-4|UGT2A1 21.74664581756881 0.2544899275067181 3 {[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}{I|L} 5 -1 38.403 0.0 0.0 3.7559 0.0 0.0 0.0 447.13447668371526 447.13447668371526 24.06681865368853 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.3252574989159953 0.0 {[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}{I|L} 3.7559 - 179 1 0.906 42312.6 1.0 11930 5724 17652 HBL1_DMSO_200M_050219_1,17656 HBL1_DMSO_200M_050219_1,17656,SMQDTLESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17657 84.496 17.0 2415900.0 25 0 233100.0 + 5254 DKGLHADQWK 10 59 599.3026727812165 1196.590792629233 2 599.3032104372978 MULTI CID FTMS 0 0 0 17652 2085178.875 0.6801425126973508 -1 0.0972900390625 5 Unmodified _DKGLHADQWK_ REV__ENSG00000068654|ENST00000263857|POLR1A 12.240655878213236 0.6421556946785427 3 [{I|L}A][RH]EEE{M(Oxidation (M))|F}A 9 -1 53.121 0.0 0.0 4.4394 0.0 0.0 0.0 111.0664985450509 111.0664985450509 27.72878745280337 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 [{I|L}A][RH]EEE{M(Oxidation (M))|F}A 4.4394 - 165 1 0.906 39073.8 1.0 11931 5724 17652 HBL1_DMSO_200M_050219_1,17657 HBL1_DMSO_200M_050219_1,17657,DKGLHADQWK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17658 84.498 27.0 2118200.0 25 0 179010.0 + 30878 RIPAYFVTV 9 69 533.3082777654097 1064.6020025976193 2 533.3081542849541 MULTI CID FTMS 0 0 0 17652 1740370.625 0.9005642722364192 -1 0.0972900390625 6 Unmodified _RIPAYFVTV_ ENSG00000204394|ENST00000375663|VARS1;ENST00000461874.1_1_6:31749609-31749932:-|nuORF;ENST00000483275.1_1_6:31749724-31750195:-|nuORF 29.081581746732265 0.1611639662936252 3 [R{I|L}][PA]Y{M(Oxidation (M))|F}VTV 9 0 + 44.359 0.0 0.0 4.1667 4.1667 83.117 0.0 0.0 0.0 2.420299789533402 21.42667503568731 2.420299789533402 11.478174818886371 0 0.8494850021680094 0.0 0.0 0.0 + + [R{I|L}][PA]Y{M(Oxidation (M))|F}VTV;[R{I|L}][R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}VEV;[R{I|L}][R{M(Oxidation (M))|F}]HHTV;[R{I|L}][PA]Y[HV]P{I|L} 4.1667;3.0885;2.0797;0.36251 +;-;-;- + 69 1 0.906 50923.7 1.0 11932 5724 17652 HBL1_DMSO_200M_050219_1,17658 HBL1_DMSO_200M_050219_1,17658,RIPAYFVTV False True RIPAYFVTV 84.497678 533.308154284954 21072302.0 17652.0 ENSG00000204394|ENST00000375663|VARS1;;ENST00000461874.1_1_6:31749609-31749932:-|nuORF;;ENST00000483275.1_1_6:31749724-31750195:-|nuORF 7.136462370554606 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17659 84.499 36.0 893360.0 25 0 169210.0 + 9370 FIPPDGNFRL 10 44 588.3140312141247 1174.6135094950494 2 588.3143798708916 MULTI CID FTMS 0 0 0 17652 1265524.625 0.466474265902482 5 -0.4659042358398437 7 Unmodified _FIPPDGNFRL_ ENSG00000070718|ENST00000396926|AP3M2;ENSG00000185009|ENST00000355264|AP3M1;ENST00000480373.1_1_10:75888732-75889691:-|nuORF;nc|ENSG00000070718|P53677-2|AP3M2 7.608950283845883 0.6914406445242895 3 DPP{[QN]|[E{I|L}]|[KN]} 5 7 22.218 0.0 0.0 1.8916 0.0 0.0 605.3288441388687 0.0 605.3288441388687 0.0 17.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 DPP{[QN]|[E{I|L}]|[KN]} 1.8916 - 11 1 0.906 33475.9 1.0 11933 5724 17652 HBL1_DMSO_200M_050219_1,17659 HBL1_DMSO_200M_050219_1,17659,FIPPDGNFRL False True FIPPDGNFRL 84.498857 588.314379870892 449786352.0 17652.0 ENST00000480373.1_1_10:75888732-75889691:-|nuORF;;nc|ENSG00000070718|P53677-2|AP3M2;;ENSG00000070718|ENST00000396926|AP3M2;;ENSG00000185009|ENST00000355264|AP3M1 6.654918352762858 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17660 84.5 42.0 845500.0 25 0 73751.0 + 22545 LPWPFRNKV 9 65 386.2258333005859 1155.6556705019575 3 386.2258178591728 MULTI CID FTMS 0 0 0 17652 1191733.625 0.7157359419091298 1 -0.0604248046875 8 Unmodified _LPWPFRNKV_ ENSG00000056558|ENST00000373887|TRAF1;nc|ENSG00000056558|Q13077-2|TRAF1 15.248480904072842 0.4239247793462406 3 {I|L}PWV 4 5 42.563 0.0 0.0 3.683 0.0 0.0 0.0 657.3466890924436 657.3466890924436 27.8701563386386 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {I|L}PWV 3.683 - 62 + 1 0.906 35040.8 1.0 11934 5724 17652 HBL1_DMSO_200M_050219_1,17660 HBL1_DMSO_200M_050219_1,17660,LPWPFRNKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17661 84.501 37.0 2258000.0 25 0 351430.0 + 44563 YPFEPPQI 8 97 495.75007820087126 989.4856034685424 2 495.7503539919853 MULTI CID FTMS 0 0 0 17652 1040888.4375 0.3653432304225589 -4 0.3506240844726562 9 Unmodified _YPFEPPQI_ ENSG00000077152|ENST00000646651|UBE2T;ENST00000487227.5_1_1:202302298-202304891:-|nuORF 60.38955033654506 0.1153153300159026 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EPPQ{I|L} 8 0 + 70.954 0.0 0.0 7.1707 7.1707 80.842 0.0 0.0 0.0 0.9691001300805624 16.40978057358332 0.9691001300805624 0.9691001300805624 0 0.9802046884880936 1.3979400086720375 0.3807196863200844 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EPPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPPQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{M(Oxidation (M))|F}PPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YEPPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EPYPQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EPP[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPP[AG]{I|L};{[QN]|[E{I|L}]|[KN]}MYPPQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{M(Oxidation (M))|F}PP[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YEPP[AG]{I|L} 7.1707;7.0728;6.7989;6.5906;6.3793;6.2347;6.1368;6.0609;5.8628;5.6546 +;-;-;-;-;-;-;-;-;- + 407 1 0.906 68296.8 1.0 11935 5724 17652 HBL1_DMSO_200M_050219_1,17661 HBL1_DMSO_200M_050219_1,17661,YPFEPPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17662 84.503 66.0 874880.0 25 0 212750.0 + 25802 NKPLEQRKSLL 11 93 442.60092637522587 1324.7809497258777 3 442.6011840701103 MULTI CID FTMS 0 0 0 17652 922493.875 0.7283723543154326 1 -0.0604248046875 10 Unmodified _NKPLEQRKSLL_ REV__nc|ENSG00000132972|Q9BXT8-5|RNF17 6.2057823575117 0.8458686499021061 3 {I|L} 1 -1 11.783 0.0 0.0 0.88941 0.0 0.0 1193.686022823337 0.0 1193.686022823337 0.0 2.4859052432431543 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.88941 + + 66 + 1 0.906 63823.8 1.0 11936 5724 17652 HBL1_DMSO_200M_050219_1,17662 HBL1_DMSO_200M_050219_1,17662,NKPLEQRKSLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17663 84.504 62.0 1513500.0 25 0 279760.0 + 1703 ALPLSEGTH 9 74 462.7439258842263 923.4732988352524 2 462.7438537478447 MULTI CID FTMS 0 0 0 17652 868108.375 0.4929246043006561 2 -0.2078399658203125 11 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 21.74664581756881 0.2544899275067181 3 [{I|L}A]P{I|L} 4 -1 38.06 0.0 0.0 4.1214 0.0 0.0 0.0 526.1902559869749 526.1902559869749 24.564856298445576 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.1214 + + 27 + 1 0.906 79426.9 1.0 11937 5724 17652 HBL1_DMSO_200M_050219_1,17663 HBL1_DMSO_200M_050219_1,17663,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17664 84.506 71.0 1121400.0 25 0 90377.0 + 42907 VVPQQLLTV 9 88 498.8077171522641 995.6008813713282 2 498.8081848025322 MULTI CID FTMS 0 0 0 17652 845563.5 0.6716123701628727 1 -0.0604248046875 12 Unmodified _VVPQQLLTV_ ENSG00000072310|ENST00000261646|SREBF1;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1 36.04419817259434 0.0971720506436186 3 [QP]Q{I|L}{I|L}TVVV 9 4 + 49.359 0.0 0.0 4.9577 4.9577 75.866 0.0 0.0 0.0 2.218487496163561 9.889917747712644 2.218487496163561 2.218487496163561 0 0.2742275032520141 0.0 0.4247425010840047 0.3494850021680094 [QP]Q{I|L}{I|L}TVVV;VV[NG]P{I|L}TVVV;[Q{I|L}]QP{I|L}TVVV;[QP][AG]{I|L}{I|L}TVVV;[QP]Q{I|L}{I|L}VTVV;{[VA]|[{I|L}G]}AQP{I|L}TVVV;VV[NG]P{I|L}VTVV;[{I|L}P]QQ{I|L}TVVV;{[QN]|[E{I|L}]|[KN]}[VP]{I|L}EVVV;[Q{I|L}][AG]P{I|L}TVVV 4.9577;4.7348;4.1199;4.0328;3.9263;3.7716;3.7035;3.3877;3.226;3.195 -;-;-;-;-;-;-;-;-;- 346 1 0.906 64724.4 1.0 11938 5724 17652 HBL1_DMSO_200M_050219_1,17664 HBL1_DMSO_200M_050219_1,17664,VVPQQLLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17665 84.507 45.0 1886800.0 25 0 143370.0 + 9805 FPAPILRAV 9 105 492.305379542449 982.596206151698 2 492.3054077029228 MULTI CID FTMS 0 0 0 17652 785521.625 0.2411538980779059 5 -0.4659042358398437 13 Unmodified _FPAPILRAV_ chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161681590-161683167:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-11|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-14|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-4|FCRLA;nc|ENSG00000132185|Q7L513-5|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 39.957323273325 0.0756908302845263 3 {M(Oxidation (M))|F}K{I|L}{I|L}PAPE 8 6 55.425 0.0 0.0 5.6407 0.0 0.0 69.05864913154453 0.0 69.05864913154453 0.0 31.602969918724497 0.0 0.0 0 1.0 0.0 0.0 0.0 {M(Oxidation (M))|F}K{I|L}{I|L}PAPE 5.6407 - 293 1 0.906 68438.3 1.0 11939 5724 17652 HBL1_DMSO_200M_050219_1,17665 HBL1_DMSO_200M_050219_1,17665,FPAPILRAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17666 84.513 289.0 609770.0 25 0 96955.0 + 3725 DAFRQPSLFY 10 132 622.308660861823 1242.602768790446 2 622.3091918826103 MULTI CID FTMS 0 0 0 17652 678615.125 0.3178129212004499 3 -0.3035354614257812 14 Unmodified _DAFRQPSLFY_ ENSG00000197442|ENST00000359015|MAP3K5 55.23464941255904 0.0494277333541689 3 {[DA]|[EG]}{M(Oxidation (M))|F}RQ[PS]{I|L}{M(Oxidation (M))|F}Y 10 0 + 77.646 0.0 0.0 6.2487 6.2487 88.032 0.0 0.0 0.0 20.251174559435697 45.26199178888777 20.251174559435697 9.164539485499262 0 1.7614393726401687 1.3010299956639813 0.7134679910804405 0.5941876774005248 + + {[DA]|[EG]}{M(Oxidation (M))|F}RQ[PS]{I|L}{M(Oxidation (M))|F}Y;{[DA]|[EG]}{M(Oxidation (M))|F}R[AG][PS]{I|L}{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}DRQ[PS]{I|L}{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}[KC]ASPD{I|L}{M(Oxidation (M))|F}Y;[VG][W{M(Oxidation (M))|F}]Q[PS]{I|L}{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}[KS][TA]AD{I|L}{M(Oxidation (M))|F}Y;{[DA]|[EG]}AA{I|L}[PS]QR[WE];{[TV]|[{I|L}S]}M{[SA]|[TG]}Q[PS]{I|L}{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}[KS]{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}{M(Oxidation (M))|F}Y;[PS]{I|L}{[WN]|[YH]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{M(Oxidation (M))|F}Y 6.2487;5.5111;4.3696;4.0562;4.0451;3.9545;3.9174;3.8966;3.8457;3.7172 +;-;-;-;-;-;-;-;-;- + 3092 1 0.906 130959.2 1.0 11940 5724 17652 HBL1_DMSO_200M_050219_1,17666 HBL1_DMSO_200M_050219_1,17666,DAFRQPSLFY True True DAFRQPSLFY 84.512536 622.30919188261 70171308.0 17652.0 ENSG00000197442|ENST00000359015|MAP3K5 8.686265309651693 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17667 84.515 119.0 1144200.0 25 0 129260.0 + 26541 NVIKVSVYL 9 150 517.8157089199846 1033.616864906769 2 517.8160278201103 MULTI CID FTMS 0 0 0 17652 647401.875 0.855718104221114 -1 0.0972900390625 15 Unmodified _NVIKVSVYL_ ENSG00000169727|ENST00000578552|GPS1;ENST00000392357.1_1_17:80012338-80013241:+|nuORF;nc|ENSG00000169727|Q13098-6|GPS1;nc|ENSG00000169727|Q13098-7|GPS1;nc|ENSG00000169727|Q13098|GPS1 71.92227651296345 0.0203558744033348 3 [{I|L}A]TK{I|L}NVY{I|L} 9 5 + 54.069 0.0 0.0 5.231 5.231 82.991 0.0 0.0 0.0 7.223571942248341 7.223571942248341 7.223571942248341 7.223571942248341 0 0.7742275032520141 1.0969100130080565 2.079689690656103 0.0 [{I|L}A]TK{I|L}NVY{I|L};{[NV]|[RG]}VVKTVY{I|L};[{I|L}A]TK{I|L}GGVY{I|L};[{I|L}T]AK{I|L}NVY{I|L};[K{I|L}][TA]{I|L}NVY{I|L};{[NV]|[RG]}VVK[Y{I|L}]S{I|L};[{I|L}T]AK{I|L}GGVY{I|L};[{I|L}A]TK{I|L}NY[{I|L}V];[K{I|L}]VSVNVY{I|L};{[NV]|[RG]}VVK[YV]T{I|L} 5.231;4.5321;4.3401;4.3222;3.6898;3.4877;3.4314;3.4157;3.2944;3.2448 -;-;-;-;-;-;-;-;-;- 1851 1 0.906 104614.3 1.0 11941 5724 17652 HBL1_DMSO_200M_050219_1,17667 HBL1_DMSO_200M_050219_1,17667,NVIKVSVYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17668 84.521 358.0 1410400.0 25 0 209710.0 + 23072 LSLMSCTI 8 172 470.7263124699047 939.4380720066094 2 470.7260009646416 MULTI CID FTMS 0 0 0 17652 544030.6875 0.1117391333147248 2 -0.2078399658203125 16 Carbamidomethyl (C),Oxidation (M) _LSLM(Oxidation (M))SC(Carbamidomethyl (C))TI_ ENST00000304056.8_1_7:32919423-32919537:-|nuORF 53.57557251787612 0.1224291679108181 3 {I|L}AS 3 6 43.787 0.0 0.0 4.6609 0.0 0.0 0.0 665.2624039142194 665.2624039142194 12.367034247796768 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.4247425010840047 0.0 {I|L}AS 4.6609 - 2586 + 1 0.906 384470.7 1.0 11942 5724 17652 HBL1_DMSO_200M_050219_1,17668 HBL1_DMSO_200M_050219_1,17668,LSLMSCTI True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17669 84.523 73.0 196400.0 25 0 21842.0 + 40967 VLWPSRGR 8 41 485.7827293252009 969.550905717202 2 485.7817260622978 MULTI CID FTMS 0 0 0 17652 426295.15625 0.6289034910588986 3 -0.3035354614257812 17 Unmodified _VLWPSRGR_ REV__ENST00000475081.1_1_1:110527674-110555049:+|nuORF 0.7936320650641473 0.8195151834710337 3 {I|L} 1 -1 11.259 0.0 0.0 1.1613 0.0 0.0 838.4557957091926 0.0 838.4557957091926 0.0 1.0779990016967744 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1613 + + 7 + 1 0.906 18294.6 1.0 11943 5724 17652 HBL1_DMSO_200M_050219_1,17669 HBL1_DMSO_200M_050219_1,17669,VLWPSRGR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17670 84.53 363.0 287260.0 25 0 25740.0 -1 0 132 920.92469341024 1839.83483388728 2 920.9240600466728 MULTI CID FTMS 0 0 0 17652 374287.9375 0.6530271468408652 -1 0.0972900390625 18 3 {[DA]|[EG]}V 3 -1 32.447 0.0 0.0 1.7636 0.0 0.0 0.0 1551.6792937539096 1551.6792937539096 9.78347485907939 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V 1.7636 - 1621 1 0.906 69176.8 1.0 11944 5724 17652 HBL1_DMSO_200M_050219_1,17670 HBL1_DMSO_200M_050219_1,17670, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17671 84.539 508.0 458860.0 25 0 50416.0 11370 GGCVPDFL 8 192 404.1873060488136 806.3600591644273 2 404.1872741580009 MULTI CID FTMS 0 0 0 17652 333084.53125 0.3350358849426199 2 -0.2078399658203125 19 Unmodified _GGCVPDFL_ ENSG00000123411|ENST00000547167|IKZF4;ENST00000547668.5_1_12:56415277-56418480:+|nuORF 15.768221252438446 0.6779680726941459 3 D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L} 6 6 + 40.138 0.0 0.0 4.9777 4.9777 86.083 0.0 0.0 0.0 11.818722087674658 12.706852642034612 11.818722087674658 13.10016905927597 0 0.5752574989159953 0.0 0.5 0.0 D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};D{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}H;{[{M(Oxidation (M))|F}H]|[RQ]}ED{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QG]|[NA]}{NN|[MP]|[D{I|L}]|[EV]}D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[{M(Oxidation (M))|F}H]|[RQ]}ED{M(Oxidation (M))|F}{I|L} 4.9777;3.3531;3.3342;2.3874;1.2335;0.79456;0.75172 -;-;-;-;-;-;- 182 + 1 0.906 181753.5 1.0 11945 5724 17652 HBL1_DMSO_200M_050219_1,17671 HBL1_DMSO_200M_050219_1,17671,GGCVPDFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17672 84.548 531.0 608760.0 25 0 88150.0 -1 ALLETYCA 8 208 314.15321840409246 939.4378258124774 3 314.1531860232353 MULTI CID FTMS 0 0 0 17652 336345.4375 0.0879786100655853 2 -0.2078399658203125 20 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 30.63653989081413 0.3996269429323407 3 A{I|L}{I|L}E 4 -1 63.532 0.0 0.0 6.7628 0.0 0.0 0.0 510.167306768225 510.167306768225 44.6977779532288 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.110924374808178 0.0 A{I|L}{I|L}E 6.7628 + + 113 + 1 0.906 258247.6 1.0 11946 5724 17652 HBL1_DMSO_200M_050219_1,17672 HBL1_DMSO_200M_050219_1,17672,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17674 84.552 3.7 18629000.0 25 0 5868100.0 + 23271 LSWLTLLLR 9 61 557.8503559949683 1113.6861590567364 2 557.8511230349541 MULTI CID FTMS 0 0 0 17673 13847924.0 0.340021540708718 4 -0.4054794311523437 1 Unmodified _LSWLTLLLR_ REV__ENST00000483825.5_1_1:167404074-167487702:-|nuORF 17.11289562659939 0.3734572693229295 3 R 1 -1 13.979 0.0 0.0 1.2552 0.0 0.0 939.5740049813444 0.0 939.5740049813444 0.0 -7.447274948966935 -7.447274948966935 0.0 0 0.0 0.0 0.0 0.0 R 1.2552 + + 6 + 1 0.906 60022.9 1.0 11947 5725 17673 HBL1_DMSO_200M_050219_1,17674 HBL1_DMSO_200M_050219_1,17674,LSWLTLLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17675 84.553 14.0 5241300.0 25 0 670280.0 + 9871 FPFKPPSI 8 78 466.7657004369864 931.5168479407728 2 466.7658264040947 MULTI CID FTMS 0 0 0 17673 4064666.25 1.0 0 0.0 2 Unmodified _FPFKPPSI_ ENSG00000160087|ENST00000349431|UBE2J2;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2 30.63653989081413 0.3996269429323407 3 {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPPS{I|L} 8 0 + 56.363 0.0 0.0 6.0507 6.0507 85.757 0.0 0.0 0.0 43.26396914916352 11.453650195120844 11.453650195120844 7.257724967479859 0 0.4247425010840047 0.0 0.0 0.0 + + {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPPS{I|L};{M(Oxidation (M))|F}{I|L}MKPPS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[W{I|L}]{I|L}E;{M(Oxidation (M))|F}{I|L}{[DS]|[MA]|[CV]|TT}PP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[W{I|L}]{I|L}E 6.0507;5.2715;4.3999;1.703;1.0149 +;-;-;-;- + 120 + 1 0.906 61112.2 1.0 11948 5725 17673 HBL1_DMSO_200M_050219_1,17675 HBL1_DMSO_200M_050219_1,17675,FPFKPPSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17676 84.555 47.0 1447300.0 25 0 153090.0 + 4624 DAYVGYMTI 9 108 516.7383444483828 1031.4621359635655 2 516.7394286990166 MULTI CID FTMS 0 0 0 17673 949435.125 0.6152613216709747 3 -0.3070220947265625 3 Unmodified _DAYVGYMTI_ ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-2|FBXO11;nc|ENSG00000138081|Q86XK2-3|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11 32.30548876998284 0.1201446275138228 3 VT{I|L} 3 6 22.893 0.0 0.0 2.2194 0.0 0.0 700.2502962192281 0.0 700.2502962192281 0.0 0.2511304620156736 0.0 0.0 0 0.0 0.0 0.535666875892183 0.0 VT{I|L} 2.2194 - 309 + 1 0.906 56344.7 1.0 11949 5725 17673 HBL1_DMSO_200M_050219_1,17676 HBL1_DMSO_200M_050219_1,17676,DAYVGYMTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17677 84.56 309.0 341070.0 25 0 117730.0 30399 RARRRRQNGR 10 123 663.3981260393479 1324.7816991454956 2 663.3983642458916 MULTI CID FTMS 0 0 0 17673 660540.875 0.689035687466807 3 -0.3070220947265625 4 Unmodified _RARRRRQNGR_ ENST00000372409.7_1_20:44563346-44566100:+|nuORF 1.4819007175156935 0.719781833666733 3 {I|L} 1 10 10.713 0.0 0.0 0.80869 0.0 0.0 1193.6866959490096 0.0 1193.6866959490096 0.0 1.787556758082145 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80869 - 52 + 1 0.906 102435.5 1.0 11950 5725 17673 HBL1_DMSO_200M_050219_1,17677 HBL1_DMSO_200M_050219_1,17677,RARRRRQNGR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17678 84.562 12.0 5809600.0 25 0 662450.0 18780 LAPGHSACPC 10 83 478.2091679885692 954.4037830439383 2 478.2089111208916 MULTI CID FTMS 0 0 0 17673 506252.6875 0.2438183056367242 39 -3.902114868164064 5 Unmodified _LAPGHSACPC_ nc|ENSG00000108849|P01298-2|PPY 4.3292370932331545 0.7066112369704343 3 [VG]V 3 9 25.062 0.0 0.0 2.6259 0.0 0.0 0.0 696.2215078549954 696.2215078549954 10.36893107080459 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VG]V 2.6259 - 109 1 0.906 60843.9 1.0 11951 5725 17673 HBL1_DMSO_200M_050219_1,17678 HBL1_DMSO_200M_050219_1,17678,LAPGHSACPC False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17679 84.564 92.0 711320.0 25 0 62427.0 + 21249 AVMKQFAFV 9 107 520.7814819801062 0 520.7823364138603 PEAK CID FTMS 0 0 0 17673 452239.15625 0.5837415763449592 20 -1.9579010009765625 6 Unmodified _LPDRSVAWP_ ENST00000511114.1_1_11:66384104-66406046:+|nuORF;ENSG00000239306|ENST00000310137|RBM14;nc|ENSG00000239306|Q96PK6-2|RBM14;nc|ENSG00000239306|Q96PK6-5|RBM14;ENST00000512283.1_1_11:66384104-66384788:+|nuORF;nc|ENSG00000239306|Q96PK6-3|RBM14;nc|ENSG00000239306|Q96PK6-4|RBM14 22.736283301280096 0.1762661025464585 3 PD{M(Oxidation (M))|F}[QT]{I|L}PG 8 7 23.326 0.0 0.0 2.2438 0.0 0.0 113.08626667662368 68.05139337711171 181.13766005373537 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.5 PD{M(Oxidation (M))|F}[QT]{I|L}PG 2.2438 - 530 + 1 0.906 55492.4 1.0 11952 5725 17673 HBL1_DMSO_200M_050219_1,17679 HBL1_DMSO_200M_050219_1,17679,LPDRSVAWP False False AVMKQFAFV 84.563546 520.78233641386 5723955.5 17673.0 ENST00000511114.1_1_11:66384104-66406046:+|nuORF;;ENSG00000239306|ENST00000310137|RBM14;;nc|ENSG00000239306|Q96PK6-2|RBM14;;nc|ENSG00000239306|Q96PK6-5|RBM14;;ENST00000512283.1_1_11:66384104-66384788:+|nuORF;;nc|ENSG00000239306|Q96PK6-3|RBM14;;nc|ENSG00000239306|Q96PK6-4|RBM14 3.2872833410898843 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17680 84.565 84.0 1014600.0 25 0 128920.0 + 44453 YMSDSFINV 9 134 538.2423685968824 1074.4701842605648 2 538.2424194216728 MULTI CID FTMS 0 0 0 17673 418613.125 1.0 0 0.0 7 Unmodified _YMSDSFINV_ ENSG00000152133|ENST00000674370|GPATCH11;nc|ENSG00000152133|Q8N954|GPATCH11 18.13498045792455 0.3457906370836843 3 [Q{I|L}]AYK{I|L}{I|L}E 8 8 29.941 0.0 0.0 2.7865 0.0 0.0 0.0 112.89923634480228 112.89923634480228 4.375758612822054 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [Q{I|L}]AYK{I|L}{I|L}E 2.7865 - 940 1 0.906 71450.7 1.0 11953 5725 17673 HBL1_DMSO_200M_050219_1,17680 HBL1_DMSO_200M_050219_1,17680,YMSDSFINV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17681 84.573 395.0 404580.0 25 0 27630.0 + 10597 FVLDHEDGLNL 11 152 636.3164012487272 1270.6182495642545 2 636.3168823122978 MULTI CID FTMS 0 0 0 17673 393045.65625 0.6629687365587317 -1 0.0604248046875 8 Unmodified _FVLDHEDGLNL_ ENSG00000137497|ENST00000393695|NUMA1;ENST00000534987.5_1_11:71728600-71747007:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1 72.96794272382148 0.0238034416328542 3 {NN|[MP]|[D{I|L}]|[EV]}HEDG{M(Oxidation (M))|F}V{I|L}N{I|L} 11 4 + 84.708 0.0 0.0 6.6667 6.6667 82.819 0.0 0.0 0.0 13.340092664721965 57.64426190664761 13.340092664721965 3.0102999566398125 0 1.1989700043360187 0.8538719643217619 1.0044321917401078 0.6747425010840047 {NN|[MP]|[D{I|L}]|[EV]}HEDG{M(Oxidation (M))|F}V{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEGD{M(Oxidation (M))|F}V{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEDG{I|L}{M(Oxidation (M))|F}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEDG{I|L}V{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEGD{I|L}V{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEGD{I|L}{M(Oxidation (M))|F}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEDG{M(Oxidation (M))|F}V{I|L}GG{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEDG{M(Oxidation (M))|F}{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEGD{M(Oxidation (M))|F}V{I|L}GG{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEDG{I|L}{M(Oxidation (M))|F}VGG{I|L} 6.6667;6.4298;6.3947;6.3947;6.1578;6.1578;5.9483;5.7823;5.7113;5.6763 -;-;-;-;-;-;-;-;-;- 9125 1 0.906 127744.8 1.0 11954 5725 17673 HBL1_DMSO_200M_050219_1,17681 HBL1_DMSO_200M_050219_1,17681,FVLDHEDGLNL True True FVLDHEDGLNL 84.572538 636.316882312298 4468855.0 17673.0 nc|ENSG00000137497|Q14980-5|NUMA1;;nc|ENSG00000137497|Q14980-3|NUMA1;;nc|ENSG00000137497|Q14980-4|NUMA1;;nc|ENSG00000137497|Q14980-2|NUMA1;;ENSG00000137497|ENST00000393695|NUMA1;;ENST00000534987.5_1_11:71728600-71747007:-|nuORF 5.962739149729411 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17682 84.583 612.0 576280.0 25 0 45028.0 + 18862 LASQHEEL 8 266 309.490381674979 925.449315625137 3 309.4903442263603 MULTI CID FTMS 0 0 0 17673 343998.21875 0.6769643305967015 8 -0.8000106811523438 9 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 3 [{I|L}A][YN]W{I|L}A 7 -1 21.057 0.0 0.0 2.2753 0.0 0.0 0.0 91.00256048400992 91.00256048400992 7.957674014200617 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A][YN]W{I|L}A 2.2753 - 604 1 0.906 278360.2 1.0 11955 5725 17673 HBL1_DMSO_200M_050219_1,17682 HBL1_DMSO_200M_050219_1,17682,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17683 84.592 478.0 240410.0 25 0 39354.0 + -1 YYHQDKCDCYH 11 117 794.8003510540589 1587.5861491749176 2 794.8015624880791 MULTI CID FTMS 0 0 0 17673 240400.0 1.0 0 0.0 10 2 Carbamidomethyl (C) _YYHQDKC(Carbamidomethyl (C))DC(Carbamidomethyl (C))YH_ REV__ENSG00000138686|ENST00000264499|BBS7;REV__ENST00000505692.1_1_4:122780107-122782831:-|nuORF;REV__nc|ENSG00000138686|Q8IWZ6-2|BBS7 5.731851221503515 0.8481046878870278 3 YYDY[DG]{I|L}GN 9 -1 60.001 0.0 0.0 3.7794 0.0 0.0 0.0 524.1500813922609 524.1500813922609 36.26000855411611 0.0 0.0 0.0 0 1.5841218823962109 2.0 0.0 1.579689690656103 YYDY[DG]{I|L}GN 3.7794 - 1548 + 1 0.906 81776.0 1.0 11956 5725 17673 HBL1_DMSO_200M_050219_1,17683 HBL1_DMSO_200M_050219_1,17683,YYHQDKCDCYH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17684 84.6 483.0 327160.0 25 0 43056.0 -1 0 130 657.3445568666086 1969.0118412000256 3 657.6788207888603 MULTI CID FTMS 0 0 0 17673 228860.21875 0.317691703581264 -7 0.6056365966796875 11 3 [NP]N{I|L}{I|L} 5 -1 33.593 0.0 0.0 1.7061 0.0 0.0 0.0 1414.6809694171277 1414.6809694171277 1.8795502620750493 0.0 0.0 0.0 0 0.0 0.721246399047171 0.0 1.1688265215345564 [NP]N{I|L}{I|L} 1.7061 - 1412 1 0.906 121094.4 1.0 11957 5725 17673 HBL1_DMSO_200M_050219_1,17684 HBL1_DMSO_200M_050219_1,17684, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17685 84.612 697.0 303510.0 25 0 50828.0 + 9683 FLREYFERL 9 149 424.8958418863592 1271.6656962592776 3 424.8957702517509 MULTI CID FTMS 0 0 0 17673 201772.671875 0.0751914102767748 6 -0.5704498291015625 12 Unmodified _FLREYFERL_ ENSG00000108946|ENST00000589228|PRKAR1A;ENST00000592194.1_1_17:66508623-66511738:+|nuORF;nc|ENSG00000108946|P10644-2|PRKAR1A 57.24910588100465 0.0276051374632116 3 {M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YEE{I|L}R 9 4 + 66.252 0.0 0.0 5.2099 5.2099 78.744 0.0 0.0 0.0 5.244850598730785 5.440680443502757 5.244850598730785 3.3756200458354044 0 0.242992819099939 0.0 1.674742501084005 0.3252574989159953 {M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YEE{I|L}R;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YE{I|L}ER;[R{I|L}]E{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}R{I|L}E;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YEER{I|L};{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}R{I|L}E;{M(Oxidation (M))|F}{I|L}[WY]V{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}{M(Oxidation (M))|F}HH{I|L}R;{M(Oxidation (M))|F}{I|L}[WY]V{M(Oxidation (M))|F}{I|L}ER;{M(Oxidation (M))|F}{I|L}RE{I|L}H{[CA]|SS}QR;{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}[VG]{I|L}E 5.2099;4.9444;4.7975;4.7821;4.4454;4.076;3.8543;3.8105;3.7282;3.7213 -;-;-;-;-;-;-;-;-;- 1311 + 1 0.906 165598.1 1.0 11958 5725 17673 HBL1_DMSO_200M_050219_1,17685 HBL1_DMSO_200M_050219_1,17685,FLREYFERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17686 84.622 546.0 233600.0 25 0 22172.0 27736 PLLWWFLI 8 182 544.3216511692519 1086.6287494053038 2 543.8244506716728 MULTI CID FTMS 0 0 0 17673 176179.46875 0.7392713242883205 8 -0.8000106811523438 13 Unmodified _PLLWWFLI_ ENST00000497964.1_1_1:39924789-39929409:+|nuORF 32.116972079565 0.368454113111938 3 {[TV]|[{I|L}S]}{I|L}NE[KA]{I|L}S{I|L} 10 6 + 42.848 0.0 0.0 3.9433 3.9433 69.689 0.0 0.0 0.0 1.4513417467550198 6.627404148525329 1.4513417467550198 0.4524904595219681 0 0.5 1.3979400086720375 0.7425526322920362 0.0 {[TV]|[{I|L}S]}{I|L}NE[KA]{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}NE{I|L}[KA]S{I|L};{[TV]|[{I|L}S]}{I|L}GGE[KA]{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}NTV[KA]{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}GGE{I|L}[KA]S{I|L};{[QN]|[E{I|L}]|[KN]}NTV{I|L}[KA]S{I|L};{[QN]|[E{I|L}]|[KN]}NTVRRS{I|L};{[TV]|[{I|L}S]}{I|L}DD[{I|L}V]{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}QTV[KA]{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}NT[K{I|L}]G{I|L}S{I|L} 3.9433;3.9016;3.8323;3.8097;3.7906;3.768;3.6476;3.5001;3.4856;3.4593 -;-;-;-;-;-;-;-;-;- 5152 1 0.906 107055.8 1.0 11959 5725 17673 HBL1_DMSO_200M_050219_1,17686 HBL1_DMSO_200M_050219_1,17686,PLLWWFLI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17687 84.633 543.0 157450.0 25 0 17980.0 27844 PLQTLHRRMSI 11 134 676.3875549242252 1350.7605569152504 2 676.3898803591728 MULTI CID FTMS 0 0 0 17673 143401.265625 0.3914623353907218 6 -0.5704498291015625 14 Unmodified _PLQTLHRRMSI_ nc|ENSG00000139865|Q86TZ1-2|TTC6 5.731851221503515 0.8481046878870278 3 {I|L} 1 10 10.969 0.0 0.0 0.81207 0.0 0.0 1219.6654011308738 0.0 1219.6654011308738 0.0 -3.723637474483468 -3.723637474483468 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.81207 + + 305 + 1 0.906 70818.5 1.0 11960 5725 17673 HBL1_DMSO_200M_050219_1,17687 HBL1_DMSO_200M_050219_1,17687,PLQTLHRRMSI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17688 84.642 544.0 88296.0 25 0 8375.6 24161 LYRPRKYLYVT 11 90 736.4268152918618 1470.8390776505234 2 736.9279052615166 MULTI CID FTMS 0 0 0 17673 132848.59375 1.0 0 0.0 15 Unmodified _LYRPRKYLYVT_ ENSG00000114487|ENST00000232603|MORC1;nc|ENSG00000114487|Q86VD1-2|MORC1 3.2813086475875832 0.8596665074481906 3 [Y{I|L}]{[ES]|[DT]|[{I|L}C]}{I|L}M 6 8 14.147 0.0 0.0 0.96184 0.0 0.0 0.0 731.4553855941359 731.4553855941359 2.887999489889708 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.0 [Y{I|L}]{[ES]|[DT]|[{I|L}C]}{I|L}M 0.96184 - 133 1 0.906 40246.3 1.0 11961 5725 17673 HBL1_DMSO_200M_050219_1,17688 HBL1_DMSO_200M_050219_1,17688,LYRPRKYLYVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17689 84.652 555.0 78321.0 25 0 5896.3 -1 0 68 1039.991259753704 0 1039.991259753704 PEAK CID FTMS 0 0 0 -1 0 16 3 {M(Oxidation (M))|F}{I|L} 2 -1 6.4537 0.0 0.0 0.31058 0.0 0.0 1520.6669544665897 294.14573084049067 1814.81268530708 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L} 0.31058 - 90 + 1 0.906 36055.6 1.0 11962 5725 17673 HBL1_DMSO_200M_050219_1,17689 HBL1_DMSO_200M_050219_1,17689, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17690 84.666 800.0 331820.0 25 0 25460.0 + 35797 SVISHLLRV 9 173 341.8818862152666 1022.6238292459998 3 341.8819152712822 MULTI CID FTMS 0 0 0 17673 124137.3515625 0.150133490995608 4 -0.4054794311523437 17 Unmodified _SVISHLLRV_ ENSG00000114520|ENST00000251775|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;nc|ENSG00000114520|O95219-2|SNX4 22.736283301280096 0.2418982879461534 3 [VS]{I|L}SH 5 4 35.348 0.0 0.0 3.4566 0.0 0.0 0.0 496.32566810273215 496.32566810273215 24.37916549520928 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.3252574989159953 0.0 + [VS]{I|L}SH 3.4566 + + 199 + 1 0.906 214846.5 0.9100000262260436 11963 5725 17673 HBL1_DMSO_200M_050219_1,17690 HBL1_DMSO_200M_050219_1,17690,SVISHLLRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17691 84.671 212.0 350690.0 25 0 27537.0 10506 FVAHAVSFTI 10 107 546.2988014453283 0 546.2847167849541 PEAK CID FTMS 0 0 0 17673 54429.36328125 0.199368863726349 5 -0.5372238159179688 18 Unmodified _FVAHAVSFTI_ ENSG00000069018|ENST00000513104|TRPC7;nc|ENSG00000069018|Q9HCX4-2|TRPC7;nc|ENSG00000069018|Q9HCX4-3|TRPC7 15.847184025352805 0.3304572136216667 3 PP 2 10 15.217 0.0 0.0 1.3953 0.0 0.0 246.13740114497065 647.3177369098814 893.4551380548521 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PP 1.3953 - 28 + 1 0.906 63795.4 1.0 11964 5725 17673 HBL1_DMSO_200M_050219_1,17691 HBL1_DMSO_200M_050219_1,17691,FVAHAVSFTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17692 84.684 719.0 345060.0 25 0 27518.0 + 23372 LTDNRVTTSL 10 239 560.3027898481591 0 560.3016845583916 PEAK CID FTMS 0 0 0 17673 106964.6015625 0.5686694587321103 -7 0.6056365966796875 19 Unmodified _LTDNRVTTSL_ REV__ENSG00000090863|ENST00000422840|GLG1;REV__ENST00000562090.5_1_16:74487067-74506519:-|nuORF;REV__ENST00000566601.1_1_16:74502729-74503008:-|nuORF;REV__nc|ENSG00000090863|Q92896-2|GLG1;REV__nc|ENSG00000090863|Q92896-3|GLG1 21.53697664764585 0.2858915239208219 3 DGAQ{I|L}M 6 -1 16.464 0.0 0.0 1.4718 0.0 0.0 163.11910862675478 337.1519869440063 500.2710955707611 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DGAQ{I|L}M 1.4718 - 1933 + 1 0.906 190467.5 1.0 11965 5725 17673 HBL1_DMSO_200M_050219_1,17692 HBL1_DMSO_200M_050219_1,17692,LTDNRVTTSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17693 84.695 683.0 74444.0 25 0 5808.6 -1 0 81 1093.7108793612783 0 1093.880786120892 PEAK CID FTMS 0 0 0 -1 0 20 3 T 1 -1 5.4846 0.0 0.0 0.25096 0.0 0.0 1881.277855058691 200.0569246881469 2081.334779746838 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.25096 - 24 + 1 0.906 37497.5 1.0 11966 5725 17673 HBL1_DMSO_200M_050219_1,17693 HBL1_DMSO_200M_050219_1,17693, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17695 84.7 0.76 64295000.0 25 0 7874300.0 + 12861 GVVPQLVKL 9 67 476.8130743891318 951.6115958450636 2 476.8137390017509 MULTI CID FTMS 0 0 0 17694 59895272.0 1.0 0 0.0 1 Unmodified _GVVPQLVKL_ ENSG00000182481|ENST00000330459|KPNA2 39.957323273325 0.0756908302845263 3 [VG]VPQ{I|L}VK{I|L} 9 0 + 66.112 0.0 0.0 6.9473 6.9473 90.672 0.0 0.0 0.0 27.65153777800478 9.921525057367404 9.921525057367404 9.208187539523747 0 0.7742275032520141 2.0 0.0 0.4247425010840047 + + [VG]VPQ{I|L}VK{I|L};[VG]VP[AG]{I|L}VK{I|L} 6.9473;5.9797 +;- + 101 + 1 0.909 45744.6 1.0 11967 5726 17694 HBL1_DMSO_200M_050219_1,17695 HBL1_DMSO_200M_050219_1,17695,GVVPQLVKL True True GVVPQLVKL 84.699633 476.813739001751 3394151808.0 17694.0 ENSG00000182481|ENST00000330459|KPNA2 6.533161640167236 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17696 84.701 5.7 8242600.0 25 0 1269000.0 -1 ALMAAPLSL 9 56 451.7527689299804 901.4909849267608 2 451.7529479861259 MULTI CID FTMS 0 0 0 17694 9399902.0 0.1199800585958082 40 -3.9655990600585938 2 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 63.082 0.0 0.0 6.9975 6.9975 83.741 0.0 0.0 0.0 16.46128035678238 8.384767769392738 8.384767769392738 3.0102999566398125 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};{[TV]|[{I|L}S]}[RD]D{I|L}A{I|L} 6.9975;6.6636;5.1715;4.8668;4.8376;4.3376;2.5116 -;-;-;-;-;-;- 100 1 0.909 43912.0 1.0 11968 5726 17694 HBL1_DMSO_200M_050219_1,17696 HBL1_DMSO_200M_050219_1,17696,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17697 84.702 7.0 8072800.0 25 0 921690.0 + 9848 FPFGKIGTV 9 71 483.2764472907161 964.5383416482322 2 483.2762328982353 MULTI CID FTMS 0 0 0 17694 7149189.0 0.4738934939106395 12 -1.06536865234375 3 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 34.40172386719151 0.1061884637610825 3 [KG]{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PE 8 7 + 36.643 0.0 0.0 3.799 3.799 79.677 0.0 0.0 0.0 3.290587192642249 3.940162615404077 3.290587192642249 8.93044601909807 0 0.4247425010840047 0.0 0.0 0.0 [KG]{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PE;{M(Oxidation (M))|F}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QV]|[N{I|L}]|[RA]|[KV]}TV;{M(Oxidation (M))|F}[{I|L}T]TG{I|L}[WK];[YV]VTG{I|L}[WK];{M(Oxidation (M))|F}[{I|L}T]TG{[QV]|[N{I|L}]|[RA]|[KV]}TV;[YV]VTG{[QV]|[N{I|L}]|[RA]|[KV]}TV 3.799;2.8732;2.5519;2.0573;1.5909;1.0962 -;-;-;-;-;- 200 1 0.909 49261.1 1.0 11969 5726 17694 HBL1_DMSO_200M_050219_1,17697 HBL1_DMSO_200M_050219_1,17697,FPFGKIGTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17698 84.703 17.0 2320700.0 25 0 303170.0 + 32607 SAWRVISSI 9 78 509.7883454532379 1017.562137973276 2 509.7878600955009 MULTI CID FTMS 0 0 0 17694 2001781.0 0.739300551443008 -2 0.2078399658203125 4 Unmodified _SAWRVISSI_ ENSG00000134308|ENST00000238081|YWHAQ 45.739877483867886 0.0497104363764649 3 {[SA]|[TG]}[WR]V{I|L}SS{I|L} 9 0 + 64.376 0.0 0.0 6.3265 6.3265 89.858 0.0 0.0 0.0 10.228787452803374 14.973024840566469 10.228787452803374 10.228787452803374 0 1.424742501084005 1.5228787452803376 0.3807196863200844 0.0 + + {[SA]|[TG]}[WR]V{I|L}SS{I|L};{[TV]|[{I|L}S]}{[WN]|[YH]}V{I|L}SS{I|L};{[SA]|[TG]}[QP]{I|L}[R{M(Oxidation (M))|F}]S{I|L};[HV]{M(Oxidation (M))|F}{I|L}[R{M(Oxidation (M))|F}]S{I|L};{[SA]|[TG]}[WR]V{[WT]|[RM]}{I|L} 6.3265;5.3213;4.6079;3.5959;3.1559 +;-;-;-;- + 83 1 0.909 37615.3 1.0 11970 5726 17694 HBL1_DMSO_200M_050219_1,17698 HBL1_DMSO_200M_050219_1,17698,SAWRVISSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17699 84.704 25.0 1542500.0 25 0 106500.0 + 13266 IPRSFMMEV 9 64 555.277491521152 1108.540430109104 2 555.2780029177666 MULTI CID FTMS 0 0 0 17694 1814904.75 0.6431974972456678 1 -0.0956954956054687 5 Unmodified _HILTDADPEV_ nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;ENSG00000122257|ENST00000319715|RBBP6 20.453626601364224 0.5043500229302764 3 {I|L}MEV 4 7 34.825 0.0 0.0 3.1416 0.0 0.0 618.2946907227132 0.0 618.2946907227132 0.0 20.22136139036361 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 {I|L}MEV 3.1416 - 90 1 0.909 38084.8 1.0 11971 5726 17694 HBL1_DMSO_200M_050219_1,17699 HBL1_DMSO_200M_050219_1,17699,HILTDADPEV False False IPRSFMMEV 84.704347 555.278002917767 43406048.0 17694.0 nc|ENSG00000122257|Q7Z6E9-2|RBBP6;;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;;ENSG00000122257|ENST00000319715|RBBP6 3.097726541260878 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17700 84.706 33.0 1262500.0 25 0 126200.0 + 3091 AVPDEILIEA 10 67 535.2927252389206 1068.5708975446412 2 535.2927734255791 MULTI CID FTMS 0 0 0 17694 1312897.875 0.6211496989046594 1 -0.0956954956054687 6 Unmodified _AVPDEILIEA_ ENSG00000112339|ENST00000367837|HBS1L;nc|ENSG00000112339|Q9Y450-2|HBS1L;nc|ENSG00000112339|Q9Y450-4|HBS1L 20.453626601364224 0.5043500229302764 3 {[QN]|[E{I|L}]|[KN]}{I|L}DP{I|L}G 7 8 32.184 0.0 0.0 3.0119 0.0 0.0 0.0 328.1522933788787 328.1522933788787 8.416375079047498 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}DP{I|L}G 3.0119 - 247 1 0.909 38327.7 1.0 11972 5726 17694 HBL1_DMSO_200M_050219_1,17700 HBL1_DMSO_200M_050219_1,17700,AVPDEILIEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17701 84.707 54.0 1219500.0 25 0 147110.0 + 41948 VQIGDIVTV 9 100 472.2768233005065 942.5390936678132 2 472.2769958376884 MULTI CID FTMS 0 0 0 17694 878335.0625 0.075481281380887 -5 0.5209274291992188 7 Unmodified _VQIGDIVTV_ ENSG00000142534|ENST00000270625|RPS11 54.773552608820026 0.0299037012502309 3 {NN|[MP]|[D{I|L}]|[EV]}GQV{I|L} 6 6 53.962 0.0 0.0 5.7252 0.0 0.0 0.0 314.1724158941632 314.1724158941632 30.189097685623523 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.4049471895720984 0.9489700043360187 {NN|[MP]|[D{I|L}]|[EV]}GQV{I|L} 5.7252 - 748 1 0.909 56733.4 1.0 11973 5726 17694 HBL1_DMSO_200M_050219_1,17701 HBL1_DMSO_200M_050219_1,17701,VQIGDIVTV True True VQIGDIVTV 84.706914 472.276995837688 174084896.0 17694.0 ENSG00000142534|ENST00000270625|RPS11 4.170007308324178 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17702 84.708 46.0 704750.0 25 0 41586.0 + 45125 YQAPDIDVQL 10 67 581.2920547809874 1160.5695566287748 2 581.2923461794853 MULTI CID FTMS 0 0 0 17694 625061.75 0.015950594431409 15 -1.3968734741210938 8 Unmodified _YQAPDIDVQL_ ENSG00000105373|ENST00000246802|NOP53;ENST00000600410.5_1_19:48257983-48259211:+|nuORF 19.361941925380144 0.5226674314761524 3 SG{I|L}[DP]AC(Carbamidomethyl (C)){I|L} 8 7 19.149 0.0 0.0 1.65 0.0 0.0 329.20805868131225 0.0 329.20805868131225 0.0 -0.3271548689802692 -0.3271548689802692 0.0 0 0.0 0.0 0.0 0.0 SG{I|L}[DP]AC(Carbamidomethyl (C)){I|L} 1.65 - 205 + 1 0.909 33083.1 1.0 11974 5726 17694 HBL1_DMSO_200M_050219_1,17702 HBL1_DMSO_200M_050219_1,17702,YQAPDIDVQL False True YQAPDIDVQL 84.708178 581.292346179485 2035087200.0 17694.0 ENSG00000105373|ENST00000246802|NOP53;;ENST00000600410.5_1_19:48257983-48259211:+|nuORF 6.70741589864095 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17703 84.712 174.0 624510.0 25 0 55557.0 + 36327 SYMPARVVVF 10 118 584.8128976852288 1167.6112424372575 2 584.8135864138603 MULTI CID FTMS 0 0 0 17694 447476.59375 1.0 0 0.0 9 Unmodified _SYMPARVVVF_ ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF;nc|ENSG00000112659|Q8IWT3-3|CUL9 41.95555342248728 0.1369168616057562 3 [{I|L}V]{M(Oxidation (M))|F}MN{[TV]|[{I|L}S]}VV{M(Oxidation (M))|F} 10 5 + 48.44 0.0 0.0 4.1486 4.1486 75.235 0.0 0.0 0.0 3.309932190414244 14.14651886415512 3.309932190414244 3.309932190414244 0 0.805462187404089 1.6989700043360187 0.0 0.3252574989159953 [{I|L}V]{M(Oxidation (M))|F}MN{[TV]|[{I|L}S]}VV{M(Oxidation (M))|F};[VP]YMN{[TV]|[{I|L}S]}VV{M(Oxidation (M))|F};[{I|L}V]{M(Oxidation (M))|F}M[WK]VV{M(Oxidation (M))|F};[VP]YM[WK]VV{M(Oxidation (M))|F};[{I|L}V]{M(Oxidation (M))|F}MGG{[TV]|[{I|L}S]}VV{M(Oxidation (M))|F};[VP]YMGG{[TV]|[{I|L}S]}VV{M(Oxidation (M))|F};[VP]{[QV]|[N{I|L}]|[RA]|[KV]}VVM{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F};[VP]{[QV]|[N{I|L}]|[RA]|[KV]}VMV{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[VP]N{[TV]|[{I|L}S]}VV{M(Oxidation (M))|F};[{I|L}T][{M(Oxidation (M))|F}E]N{[TV]|[{I|L}S]}VV{M(Oxidation (M))|F} 4.1486;3.8651;3.8262;3.5427;3.0851;2.8017;2.6496;2.3918;2.1664;2.1292 -;-;-;-;-;-;-;-;-;- 442 1 0.909 84690.7 1.0 11975 5726 17694 HBL1_DMSO_200M_050219_1,17703 HBL1_DMSO_200M_050219_1,17703,SYMPARVVVF False True SYMPARVVVF 84.711574 584.81358641386 4027951.5 17694.0 ENST00000515773.5_1_6:43164260-43192180:+|nuORF;;ENSG00000112659|ENST00000252050|CUL9;;nc|ENSG00000112659|Q8IWT3-3|CUL9 8.045513788859049 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17704 84.719 387.0 474520.0 25 0 36658.0 + 29985 QTAPEEAFIKL 11 166 623.83785803956 1245.66116314592 2 623.8381225466728 MULTI CID FTMS 0 0 0 17694 455119.25 1.0 0 0.0 10 Unmodified _QTAPEEAFIKL_ ENSG00000196659|ENST00000408939|TTC30B;ENSG00000197557|ENST00000355689|TTC30A 66.68293810318366 0.0420228588792048 3 QTAPEEA{M(Oxidation (M))|F}{I|L}K{I|L} 11 0 + 85.592 0.0 0.0 6.8712 6.8712 92.014 0.0 0.0 0.0 9.128498242810991 12.132104434506289 9.128498242810991 12.132104434506289 0 1.274227503252014 1.0969100130080565 0.3807196863200844 0.2215141619232908 + + QTAPEEA{M(Oxidation (M))|F}{I|L}K{I|L};QTAPEEA{M(Oxidation (M))|F}{I|L}{I|L}K;[QT]A{I|L}C(Carbamidomethyl (C)){I|L}K{[WN]|[YH]}{I|L};[AG]TA{I|L}C(Carbamidomethyl (C)){I|L}K{[WN]|[YH]}{I|L};[QT]A{I|L}C(Carbamidomethyl (C)){I|L}K{I|L}{[WN]|[YH]};[AG]TA{I|L}C(Carbamidomethyl (C)){I|L}K{I|L}{[WN]|[YH]};[NP]A[YQ]{I|L}K{[WN]|[YH]}{I|L};{[SA]|[TG]}AA{I|L}C(Carbamidomethyl (C)){I|L}K{[WN]|[YH]}{I|L};[QT]{I|L}{I|L}CQK{[WN]|[YH]}{I|L};[AG][R{M(Oxidation (M))|F}]K{I|L}C(Carbamidomethyl (C)){I|L}A[NP] 6.8712;5.8973;4.63;4.117;4.0017;3.4887;3.0879;2.8078;2.5466;2.5156 +;-;-;-;-;-;-;-;-;- + 3200 + 1 0.909 136053.7 1.0 11976 5726 17694 HBL1_DMSO_200M_050219_1,17704 HBL1_DMSO_200M_050219_1,17704,QTAPEEAFIKL True True QTAPEEAFIKL 84.718535 623.838122546673 4900508.0 17694.0 ENSG00000196659|ENST00000408939|TTC30B;;ENSG00000197557|ENST00000355689|TTC30A 8.073431650797525 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17705 84.724 305.0 442960.0 25 0 70286.0 + 33872 SLFGGSVKL 9 129 454.26573028946063 906.5169076457212 2 454.2662841677666 MULTI CID FTMS 0 0 0 17694 408499.5 0.4911692382193259 1 -0.0956954956054687 11 Unmodified _SLFGGSVKL_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000477798.5_1_3:33840175-33866683:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 27.628801355627647 0.1796483985696185 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[SG]VK{I|L} 9 0 + 51.686 0.0 0.0 5.7016 5.7016 75.404 0.0 0.0 0.0 38.1914468044949 12.98332479720628 12.98332479720628 0.4575749056067479 0 0.4247425010840047 2.0 0.3252574989159953 0.2302046884880938 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[SG]VK{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[NS]VK{I|L};{[TV]|[{I|L}S]}{I|L}[WY]{I|L}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[SG][K{I|L}]V;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[NS][K{I|L}]V;{[TV]|[{I|L}S]}{I|L}[VP]P[NP]A;{[TV]|[{I|L}S]}{I|L}[YK][NG]{I|L};{[TV]|[{I|L}S]}{I|L}[YK]{[NV]|[RG]}A;{[TV]|[{I|L}S]}{I|L}[YK]{[QG]|[NA]}V 5.7016;5.6512;3.1913;2.8692;2.8187;2.6132;2.398;1.9402;1.5559 +;-;-;-;-;-;-;-;- + 355 + 1 0.909 107519.6 1.0 11977 5726 17694 HBL1_DMSO_200M_050219_1,17705 HBL1_DMSO_200M_050219_1,17705,SLFGGSVKL False True SLFGGSVKL 84.724112 454.266284167767 12540338.0 17694.0 ENST00000477798.5_1_3:33840175-33866683:+|nuORF;;ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 5.279827276865642 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17706 84.732 417.0 534340.0 25 0 50783.0 + -1 LPVPVPAVV 9 141 890.7929874991225 0 890.7927734255791 PEAK CID FTMS 0 0 0 17694 369252.34375 0.6570395817126626 -1 0.1474151611328125 12 ENSG00000165684|ENST00000684778|SNAPC4 3 VD 2 -1 9.1734 0.0 0.0 0.51549 0.0 0.0 1383.3341306605512 179.11947046451408 1562.4536011250652 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.0 VD 0.51549 - 1183 + 1 0.909 147040.1 1.0 11978 5726 17694 HBL1_DMSO_200M_050219_1,17706 HBL1_DMSO_200M_050219_1,17706, False False LPVPVPAVV 84.73157 890.792773425579 1883458.0 17694.0 ENSG00000165684|ENST00000684778|SNAPC4 3.890178839365641 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17707 84.733 73.0 1061000.0 25 0 116120.0 + + 37244 HQFPELMGV 9 118 528.3199801443271 1054.6254073554542 2 528.8239623904228 MULTI CID FTMS 0 0 0 -1 0 13 Unmodified _TILSLPALVE_ nc|ENSG00000004866|Q9NRC1-6|ST7;nc|ENSG00000004866|Q9NRC1|ST7;nc|ENSG00000004866|Q9NRC1-3|ST7;ENSG00000004866|ENST00000323984|ST7;nc|ENSG00000004866|Q9NRC1-2|ST7;ENST00000464020.1_1_7:116859112-116863031:+|nuORF;nc|ENSG00000004866|Q9NRC1-5|ST7;nc|ENSG00000004866|Q9NRC1-4|ST7 25.399314129420983 0.3980215340001851 3 [{I|L}T]VT{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[KP] 9 -1 + 25.151 0.0 0.0 2.3849 2.3849 69.773 0.0 0.0 0.0 2.294167966322924 0.4305997461732183 0.4305997461732183 2.294167966322924 0 0.0 0.958607314841775 1.1462566630072957 0.0 [{I|L}T]VT{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[KP];{[TV]|[{I|L}S]}{I|L}T{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[KP];[{I|L}T]{I|L}S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[KP];{I|L}{I|L}ST{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[KP];{I|L}{I|L}TS{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[KP] 2.3849;2.1673;1.9132;1.2458;0.77412 -;-;-;-;- 428 1 0.909 66570.7 1.0 11979 5726 17694 HBL1_DMSO_200M_050219_1,17707 HBL1_DMSO_200M_050219_1,17707,TILSLPALVE False False HQFPELMGV 84.733289 528.823962390423 11213802.0 17694.0 nc|ENSG00000004866|Q9NRC1-6|ST7;;nc|ENSG00000004866|Q9NRC1|ST7;;nc|ENSG00000004866|Q9NRC1-3|ST7;;ENSG00000004866|ENST00000323984|ST7;;nc|ENSG00000004866|Q9NRC1-2|ST7;;ENST00000464020.1_1_7:116859112-116863031:+|nuORF;;nc|ENSG00000004866|Q9NRC1-5|ST7;;nc|ENSG00000004866|Q9NRC1-4|ST7 3.7558322747548414 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17708 84.736 145.0 931940.0 25 0 225940.0 + 7558 GLLENIPRV 9 135 506.2715288256308 0 506.2701599001884 PEAK CID FTMS 0 0 0 17694 389805.84375 1.0 0 0.0 14 Unmodified _EIIWHGRT_ ENST00000424203.5_1_21:34876433-34900844:-|nuORF;ENSG00000159131|ENST00000381815|GART 12.531546534597751 0.5131024102181418 3 PTY{[RE]|[WV]}M 6 7 8.2813 0.0 0.0 0.8195 0.0 0.0 162.12324634175053 68.05139337711171 230.17463971886224 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3807196863200844 PTY{[RE]|[WV]}M 0.8195 - 306 + 1 0.909 107627.0 1.0 11980 5726 17694 HBL1_DMSO_200M_050219_1,17708 HBL1_DMSO_200M_050219_1,17708,EIIWHGRT False False GLLENIPRV 84.736195 506.270159900188 2811866.0 17694.0 ENST00000424203.5_1_21:34876433-34900844:-|nuORF;;ENSG00000159131|ENST00000381815|GART 2.5080971717834477 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17709 84.74 179.0 730660.0 25 0 70976.0 + -1 PLWRCRRL 8 132 578.8306695700735 1155.646786206947 2 578.8365966677666 MULTI CID FTMS 0 0 0 17694 323071.125 0.6895329189487631 4 -0.3898086547851562 15 Carbamidomethyl (C) _PLWRC(Carbamidomethyl (C))RRL_ REV__ENST00000370761.7_1_X:134478722-134481004:+|nuORF 36.46614268402704 0.2934124525509074 3 {I|L}PWP 4 -1 44.412 0.0 0.0 3.8431 0.0 0.0 0.0 659.3648465837846 659.3648465837846 1.999328444826176 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {I|L}PWP 3.8431 - 808 + 1 0.909 103569.1 1.0 11981 5726 17694 HBL1_DMSO_200M_050219_1,17709 HBL1_DMSO_200M_050219_1,17709,PLWRCRRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17710 84.749 503.0 359520.0 25 0 13202.0 -1 0 137 1037.5229435833448 0 1037.522631824017 PEAK CID FTMS 0 0 0 17694 263204.09375 0.562207674779026 1 -0.0956954956054687 16 3 {M(Oxidation (M))|F}EP{I|L}[DP]Y{I|L}MQSV 12 -1 47.16 0.0 0.0 2.2749 0.0 0.0 455.2832578057072 195.0780428522094 650.3613006579166 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7689301784845295 0.3252574989159953 {M(Oxidation (M))|F}EP{I|L}[DP]Y{I|L}MQSV 2.2749 - 21972 + 1 0.909 118704.0 1.0 11982 5726 17694 HBL1_DMSO_200M_050219_1,17710 HBL1_DMSO_200M_050219_1,17710, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17711 84.762 751.0 258180.0 25 0 15615.0 + -1 FRFLRQLIMSI 11 216 480.6114432419272 1438.8125003259815 3 480.6120178103447 MULTI CID FTMS 0 0 0 17694 165125.875 1.0 0 0.0 17 Oxidation (M) _FRFLRQLIM(Oxidation (M))SI_ REV__ENST00000486002.1_1_21:27097498-27107174:-|nuORF;REV__nc|ENSG00000154723|P18859-2|ATP5PF 2.843284757254958 0.8617331327080043 3 {[QN]|[E{I|L}]|[KN]}K{I|L}{I|L}TY 7 -1 26.641 0.0 0.0 1.8516 0.0 0.0 0.0 575.2862911797503 575.2862911797503 5.707675745352681 0.0 0.0 0.0 0 0.0 0.958607314841775 0.2396518287104437 0.0 {[QN]|[E{I|L}]|[KN]}K{I|L}{I|L}TY 1.8516 - 1338 1 0.909 154466.8 1.0 11983 5726 17694 HBL1_DMSO_200M_050219_1,17711 HBL1_DMSO_200M_050219_1,17711,FRFLRQLIMSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17712 84.773 599.0 64343.0 25 0 3133.4 -1 0 64 1130.877978503704 0 1130.877978503704 PEAK CID FTMS 0 0 0 -1 0 18 3 TTV 3 -1 13.949 0.0 0.0 0.61727 0.0 0.0 1278.2870716540897 677.2597750299436 1955.546846684033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8252574989159953 0.0 TTV 0.61727 - 136 + 1 0.909 34503.4 1.0 11984 5726 17694 HBL1_DMSO_200M_050219_1,17712 HBL1_DMSO_200M_050219_1,17712, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17713 84.782 503.0 243750.0 25 0 18179.0 + 44470 YNKGYLFSFI 10 153 626.3237001870148 1250.6328474408294 2 626.3237182497978 MULTI CID FTMS 0 0 0 17694 130941.75 0.0134257920639803 15 -1.3968734741210938 19 Unmodified _YNKGYLFSFI_ REV__ENSG00000183318|ENST00000689094|SPDYE4 41.8396318013385 0.1381409678234242 3 {NN|[MP]|[D{I|L}]|[EV]}GQ{I|L}[KC]SQ{M(Oxidation (M))|F}{I|L} 11 -1 + 70.826 0.0 0.0 5.6632 5.6632 76.337 0.0 0.0 0.0 4.519917662864884 16.57577319177794 4.519917662864884 1.0305206088074073 0 0.8494850021680094 1.3979400086720375 1.236346736360778 1.3829131673969606 {NN|[MP]|[D{I|L}]|[EV]}GQ{I|L}[KC]SQ{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GQCK{I|L}SQ{M(Oxidation (M))|F}{I|L};[VG]EQ{I|L}[KC]SQ{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{I|L}GVQC(Carbamidomethyl (C))SQ{M(Oxidation (M))|F}{I|L};[VG]EQCK{I|L}SQ{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{I|L}Q[KC]SQ{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GQ{I|L}[KC]S[AG]{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}G[AG]{I|L}[KC]SQ{M(Oxidation (M))|F}{I|L};[{I|L}V]TGVQC(Carbamidomethyl (C))SQ{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GQCK{I|L}S[AG]{M(Oxidation (M))|F}{I|L} 5.6632;5.5808;5.3018;5.2776;5.2194;4.9625;4.9333;4.9333;4.9006;4.8509 -;-;-;-;-;-;-;-;-;- 4247 1 0.909 95731.7 1.0 11985 5726 17694 HBL1_DMSO_200M_050219_1,17713 HBL1_DMSO_200M_050219_1,17713,YNKGYLFSFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17714 84.791 510.0 161420.0 25 0 8742.1 18155 KTQKVWVHYSL 11 110 694.8863403201103 0 694.8863403201103 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _KTQKVWVHYSL_ ENST00000367025.7_1_1:209955512-209955614:+|nuORF 9.38312468134398 0.4559597037863106 3 VVR{I|L} 4 8 30.165 0.0 0.0 2.1737 0.0 0.0 694.3317585445704 223.0924929254516 917.424251470022 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.6237125054200234 VVR{I|L} 2.1737 - 236 + 1 0.909 65200.6 1.0 11986 5726 17694 HBL1_DMSO_200M_050219_1,17714 HBL1_DMSO_200M_050219_1,17714,KTQKVWVHYSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17716 84.795 16.0 3245500.0 25 0 530630.0 + 4646 DAYVLPKLY 9 73 541.2999781941046 1080.585403455009 2 541.3002807497978 MULTI CID FTMS 0 0 0 17715 2655741.0 0.0093814973911806 18 -1.7147903442382812 1 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 30.63653989081413 0.1413794767160703 3 {[DA]|[EG]}YV 4 5 33.02 0.0 0.0 3.0558 0.0 0.0 0.0 629.3677270236216 629.3677270236216 10.880456295278403 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}YV 3.0558 + + 69 1 0.913 46856.4 1.0 11987 5727 17715 HBL1_DMSO_200M_050219_1,17716 HBL1_DMSO_200M_050219_1,17716,DAYVLPKLY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17717 84.797 17.0 1297200.0 25 0 164010.0 + 42785 VVISSDGQFAL 11 51 568.3032507927411 1134.591948652282 2 568.3033325076103 MULTI CID FTMS 0 0 0 17715 2158000.75 0.3197063014193814 2 -0.1623687744140625 2 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 13.042465956692816 0.7638483625850725 3 {I|L} 1 10 12.764 0.0 0.0 1.125 0.0 0.0 1003.4969301970071 0.0 1003.4969301970071 0.0 -6.175952772115174 -6.175952772115174 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.125 + + 7 + 1 0.913 25686.5 1.0 11988 5727 17715 HBL1_DMSO_200M_050219_1,17717 HBL1_DMSO_200M_050219_1,17717,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17718 84.798 7.8 5818200.0 25 0 898510.0 + 6160 DTATLLLKL 9 62 494.3078292128518 986.6011054925036 2 494.3080932497978 MULTI CID FTMS 0 0 0 17715 5787815.5 0.7634193227484447 -1 0.0956954956054687 3 Unmodified _DTATLLLKL_ REV__ENSG00000250120|ENST00000307360|PCDHA10;REV__nc|ENSG00000250120|Q9Y5I2-2|PCDHA10;REV__nc|ENSG00000250120|Q9Y5I2-3|PCDHA10 32.30548876998284 0.1201446275138228 3 [TA]{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{I|L}K{I|L} 9 -1 + 53.064 0.0 0.0 5.3785 5.3785 89.893 0.0 0.0 0.0 25.801307489269227 11.27121139309525 11.27121139309525 53.06411690283387 0 0.7614393726401688 2.0 0.0 0.0 [TA]{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{I|L}K{I|L} 5.3785 - 66 + 1 0.913 41528.5 1.0 11989 5727 17715 HBL1_DMSO_200M_050219_1,17718 HBL1_DMSO_200M_050219_1,17718,DTATLLLKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17719 84.799 11.0 3619300.0 25 0 388880.0 11821 GLPDAHLGL 9 68 446.74781623193104 891.4810795306621 2 446.7481262087822 MULTI CID FTMS 0 0 0 17715 4270881.0 0.2072598283737924 -2 0.2431106567382812 4 Unmodified _GLPDAHLGL_ ENSG00000011451|ENST00000673675|WIZ;nc|ENSG00000011451|O95785-3|WIZ;nc|ENSG00000011451|O95785-4|WIZ;nc|ENSG00000011451|O95785|WIZ 23.1484247019978 0.2366544122328345 3 {[DA]|[EG]}{M(Oxidation (M))|F} 3 7 33.952 0.0 0.0 3.8085 0.0 0.0 0.0 555.327936932497 555.327936932497 -0.5777819526436545 0.0 -0.5777819526436545 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F} 3.8085 - 38 + 1 0.913 40382.1 1.0 11990 5727 17715 HBL1_DMSO_200M_050219_1,17719 HBL1_DMSO_200M_050219_1,17719,GLPDAHLGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17720 84.8 31.0 1528900.0 25 0 146370.0 + 18621 LAFEEEFGRV 10 61 598.8014733109902 0 598.8011352419853 PEAK CID FTMS 0 0 0 17715 1689693.0 0.5017371723101816 2 -0.1623687744140625 5 Unmodified _LAFEEEFGRV_ ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32689659-32696621:+|nuORF 33.4449034751529 0.1805881786150987 3 A{M(Oxidation (M))|F}EEE{M(Oxidation (M))|F} 6 4 46.459 0.0 0.0 3.8858 0.0 0.0 113.08431761631785 327.1788424127563 440.2631600290741 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.0 + A{M(Oxidation (M))|F}EEE{M(Oxidation (M))|F} 3.8858 + + 81 + 1 0.913 41620.7 1.0 11991 5727 17715 HBL1_DMSO_200M_050219_1,17720 HBL1_DMSO_200M_050219_1,17720,LAFEEEFGRV False True LAFEEEFGRV 84.800038 598.801135241985 66490408.0 17715.0 ENSG00000084623|ENST00000677711|EIF3I;;ENST00000474371.1_1_1:32689659-32696621:+|nuORF 8.777163982391357 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17721 84.802 71.0 694860.0 25 0 98951.0 + 11689 GLFSALSELGL 11 73 553.8082526999918 1105.6019524667836 2 553.8082153201103 MULTI CID FTMS 0 0 0 17715 962858.625 0.0384413218649852 6 -0.5569000244140625 6 Unmodified _GLFSALSELGL_ REV__ENST00000342609.6_1_2:191857981-191858245:-|nuORF 29.081581746732265 0.4093582134107448 3 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}A{I|L}T 7 -1 59.557 0.0 0.0 5.3869 0.0 0.0 0.0 387.1676424615844 387.1676424615844 40.28782221775522 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.1549471895720984 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}A{I|L}T 5.3869 - 175 + 1 0.913 42909.8 1.0 11992 5727 17715 HBL1_DMSO_200M_050219_1,17721 HBL1_DMSO_200M_050219_1,17721,GLFSALSELGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17722 84.803 53.0 1245700.0 25 0 245110.0 + 9371 FIPPDGNFRL 10 65 588.3140312141247 1174.6135094950494 2 588.3147460818291 MULTI CID FTMS 0 0 0 17715 927621.9375 0.3419228308815805 8 -0.6817474365234375 7 Unmodified _FIPPDGNFRL_ ENSG00000070718|ENST00000396926|AP3M2;ENSG00000185009|ENST00000355264|AP3M1;ENST00000480373.1_1_10:75888732-75889691:-|nuORF;nc|ENSG00000070718|P53677-2|AP3M2 16.149105407346934 0.5765757077271437 3 {I|L}DPP{[QN]|[E{I|L}]|[KN]} 6 7 31.159 0.0 0.0 2.6527 0.0 0.0 492.24543959785314 0.0 492.24543959785314 0.0 20.445312593723983 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}DPP{[QN]|[E{I|L}]|[KN]} 2.6527 - 78 1 0.913 57415.0 1.0 11993 5727 17715 HBL1_DMSO_200M_050219_1,17722 HBL1_DMSO_200M_050219_1,17722,FIPPDGNFRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17723 84.805 76.0 757950.0 25 0 94992.0 + 42908 VVPQQLLTV 9 84 498.8077171522641 995.6008813713282 2 498.8080322146416 MULTI CID FTMS 0 0 0 17715 902362.1875 0.716726310315227 4 -0.3273391723632812 8 Unmodified _VVPQQLLTV_ ENSG00000072310|ENST00000261646|SREBF1;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1 18.13498045792455 0.3457906370836843 3 [QP]Q{I|L}{I|L}{[TV]|[{I|L}S]}VV 9 4 + 27.002 0.0 0.0 2.7122 2.7122 78.794 0.0 0.0 0.0 4.762036441594194 7.551792077260856 4.762036441594194 9.208187539523752 0 0.2742275032520141 0.0 0.0 0.2887254899964357 [QP]Q{I|L}{I|L}{[TV]|[{I|L}S]}VV;[QP][AG]{I|L}{I|L}{[TV]|[{I|L}S]}VV 2.7122;1.7873 -;- 130 1 0.913 49932.7 1.0 11994 5727 17715 HBL1_DMSO_200M_050219_1,17723 HBL1_DMSO_200M_050219_1,17723,VVPQQLLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17724 84.806 57.0 1280800.0 25 0 132460.0 + 22546 LPWPFRNKV 9 70 386.2258333005859 1155.6556705019575 3 386.2257568240166 MULTI CID FTMS 0 0 0 17715 839759.75 0.5043461248679841 4 -0.3273391723632812 9 Unmodified _LPWPFRNKV_ ENSG00000056558|ENST00000373887|TRAF1;nc|ENSG00000056558|Q13077-2|TRAF1 20.41453444215458 0.284085796332423 3 {I|L}PWV{M(Oxidation (M))|F} 5 5 45.037 0.0 0.0 3.8971 0.0 0.0 0.0 510.2932222955688 510.2932222955688 32.81865655543953 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}PWV{M(Oxidation (M))|F} 3.8971 - 103 + 1 0.913 66339.5 1.0 11995 5727 17715 HBL1_DMSO_200M_050219_1,17724 HBL1_DMSO_200M_050219_1,17724,LPWPFRNKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17725 84.808 71.0 910970.0 25 0 147800.0 + 1704 ALPLSEGTH 9 77 462.7439258842263 923.4732988352524 2 462.7440673708916 MULTI CID FTMS 0 0 0 17715 784054.6875 0.4451976938778088 5 -0.400482177734375 10 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 15.847184025352805 0.4077185912009129 3 [{I|L}A]P{I|L} 4 -1 38.94 0.0 0.0 4.2167 0.0 0.0 0.0 526.1902559869749 526.1902559869749 26.95046257204389 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.2167 + + 22 + 1 0.913 57873.0 1.0 11996 5727 17715 HBL1_DMSO_200M_050219_1,17725 HBL1_DMSO_200M_050219_1,17725,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17726 84.81 110.0 767690.0 25 0 68114.0 40538 VIYCSEEQSL 10 117 585.7711381948089 1169.5277234564178 2 585.7715331912041 MULTI CID FTMS 0 0 0 17715 707495.5625 0.7296892432559402 -1 0.0956954956054687 11 Unmodified _VIYCSEEQSL_ ENST00000355135.6_2_X:13835118-13835178:-|nuORF 13.90604991867851 0.6142120002215601 3 [{I|L}V]{[{M(Oxidation (M))|F}C]|[YS]}CNMPM{I|L} 10 6 + 56.202 0.0 0.0 4.8056 4.8056 80.657 0.0 0.0 0.0 6.944704262582526 6.368220975871743 6.368220975871743 6.368220975871743 0 0.3494850021680094 2.0 0.0 0.4247425010840047 [{I|L}V]{[{M(Oxidation (M))|F}C]|[YS]}CNMPM{I|L};[{I|L}V]{[{M(Oxidation (M))|F}C]|[YS]}CNMPP{M(Oxidation (M))|F};[{I|L}V]PVYMNC[MT];[{I|L}V]{[{M(Oxidation (M))|F}C]|[YS]}CGGMPM{I|L};[{I|L}V]PVYMN[MT]C;[{I|L}V]{[{M(Oxidation (M))|F}C]|[YS]}CGGMPP{M(Oxidation (M))|F};[{I|L}V]PVYMGGC[MT];[{I|L}V]{[{M(Oxidation (M))|F}C]|[YS]}CN[{M(Oxidation (M))|F}E][VP];[{I|L}V]{[{M(Oxidation (M))|F}C]|[YS]}C[VP]C(Carbamidomethyl (C)){[ET]|[MV]};[{I|L}V]PVY[CS]C(Carbamidomethyl (C)){[ET]|[MV]} 4.8056;4.261;4.0809;3.6588;3.1196;3.1143;2.5112;2.2644;1.8689;1.4866 -;-;-;-;-;-;-;-;-;- 447 + 1 0.913 67435.7 1.0 11997 5727 17715 HBL1_DMSO_200M_050219_1,17726 HBL1_DMSO_200M_050219_1,17726,VIYCSEEQSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17727 84.816 335.0 836430.0 25 0 81038.0 + 42844 VVLEEIPKL 9 161 520.3234595674286 1038.632366201657 2 520.3239013552666 MULTI CID FTMS 0 0 0 17715 589121.625 0.1199273835913971 -5 0.54156494140625 12 Unmodified _VVLEEIPKL_ ENSG00000116266|ENST00000370008|STXBP3 62.57269311338072 0.0246576765497938 3 VV{I|L}EE{I|L}PK{I|L} 9 0 + 82.961 0.0 0.0 7.9875 7.9875 94.594 0.0 0.0 0.0 47.391143015546646 7.391143015546646 7.391143015546646 11.683829003394834 0 0.8609243748081783 2.0 1.2302046884880935 0.1237125054200235 + + VV{I|L}EE{I|L}PK{I|L};VV{I|L}EE{I|L}{I|L}KP;VV{I|L}[HA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L};VV{I|L}[HA]V[RV]{M(Oxidation (M))|F};VV{I|L}[TA]V{[QN]|[E{I|L}]|[KN]}PV;VV{I|L}[TA]V[DP]{I|L}{I|L};VV{I|L}[TA]V{[QN]|[E{I|L}]|[KN]}VP;[KP]{I|L}{[QN]|[E{I|L}]|[KN]}QRR;[KP]{I|L}[Q{I|L}]ERR 7.9875;6.8626;4.5747;4.4677;4.3764;4.1069;3.7741;0.44426;0.15443 +;-;-;-;-;-;-;-;- + 1240 + 1 0.913 212442.8 1.0 11998 5727 17715 HBL1_DMSO_200M_050219_1,17727 HBL1_DMSO_200M_050219_1,17727,VVLEEIPKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17728 84.822 324.0 1096600.0 25 0 83020.0 + 18647 LAGQVIVTV 9 118 899.5575723384986 898.5502958718986 1 899.5626708865166 MULTI CID FTMS 0 0 0 17715 537796.1875 0.0664093445821698 16 -1.4976577758789062 13 Unmodified _LAGQVIVTV_ ENSG00000101577|ENST00000677752|LPIN2 64.23631603340823 0.0237365939569086 3 [{I|L}A]VNAV{I|L}TV 9 4 + 68.527 0.0 0.0 7.6264 7.6264 86.769 0.0 0.0 0.0 9.208187539523747 14.09256854528806 9.208187539523747 3.930241919876295 0 0.2614393726401688 0.8239087409443188 0.5 1.1861818737241734 [{I|L}A]VNAV{I|L}TV;[{I|L}A]VNA{I|L}VTV;[{I|L}A]VNG{I|L}{I|L}TV;[{I|L}A]VANV{I|L}TV;[{I|L}A]NVAV{I|L}TV;[{I|L}A]NG{I|L}V{I|L}TV;[{I|L}A]GN{I|L}V{I|L}TV;[{I|L}A]NAVV{I|L}TV;[{I|L}A]VAN{I|L}VTV;[{I|L}A]NVG{I|L}{I|L}TV 7.6264;7.189;7.189;7.1836;7.0955;7.0955;6.9564;6.7604;6.7462;6.6581 -;-;-;-;-;-;-;-;-;- 12229 1 0.913 229132.8 1.0 11999 5727 17715 HBL1_DMSO_200M_050219_1,17728 HBL1_DMSO_200M_050219_1,17728,LAGQVIVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17729 84.824 47.0 1183100.0 25 0 129800.0 42580 VTQMTSEDL 9 101 512.236239987042 1022.457927040884 2 512.2375366091728 MULTI CID FTMS 0 0 0 17715 537096.75 0.0991444837002695 4 -0.3273391723632812 14 Unmodified _VTQMTSEDL_ ENSG00000154928|ENST00000398015|EPHB1;nc|ENSG00000154928|P54762-5|EPHB1 19.256988751693697 0.3154191944385105 3 [{I|L}A]GHA{I|L}{I|L} 7 8 36.163 0.0 0.0 3.5369 0.0 0.0 0.0 344.0286736483245 344.0286736483245 16.922451997212 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]GHA{I|L}{I|L} 3.5369 - 347 1 0.913 47768.2 1.0 12000 5727 17715 HBL1_DMSO_200M_050219_1,17729 HBL1_DMSO_200M_050219_1,17729,VTQMTSEDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17730 84.825 66.0 792690.0 25 0 47045.0 + 44997 YPSLPTMTV 9 96 504.7566657755049 1007.49877861781 2 504.7573730349541 MULTI CID FTMS 0 0 0 17715 517001.53125 0.1751781085106575 -4 0.4008255004882812 15 Unmodified _YPSLPTMTV_ ENSG00000089289|ENST00000356413|IGBP1 53.57557251787612 0.0325303259649373 3 [TP]M{I|L}S 5 6 22.682 0.0 0.0 2.2514 0.0 0.0 0.0 475.2186021864224 475.2186021864224 3.926675035687314 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.6307196863200843 0.0 [TP]M{I|L}S 2.2514 - 289 1 0.913 45501.0 1.0 12001 5727 17715 HBL1_DMSO_200M_050219_1,17730 HBL1_DMSO_200M_050219_1,17730,YPSLPTMTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17731 84.833 420.0 934280.0 25 0 77609.0 + 22000 LPPPPMQYI 9 235 528.2826865253334 1054.5508201174666 2 528.2841064333916 MULTI CID FTMS 0 0 0 17715 368272.90625 0.569847034794096 -1 0.0956954956054687 16 Unmodified _LPPPPMQYI_ ENSG00000155868|ENST00000286317|MED7 53.57557251787612 0.0325303259649373 3 VVPT{I|L} 5 7 36.553 0.0 0.0 3.4662 0.0 0.0 0.0 542.202253793501 542.202253793501 3.804256523463295 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.6643943297944485 0.0 VVPT{I|L} 3.4662 - 7873 1 0.913 303729.8 1.0 12002 5727 17715 HBL1_DMSO_200M_050219_1,17731 HBL1_DMSO_200M_050219_1,17731,LPPPPMQYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17732 84.84 434.0 540340.0 25 0 57406.0 + 26542 NVIKVSVYL 9 205 517.8157089199846 1033.616864906769 2 517.8162109255791 MULTI CID FTMS 0 0 0 17715 351914.40625 0.4651508440014156 2 -0.1623687744140625 17 Unmodified _NVIKVSVYL_ ENSG00000169727|ENST00000578552|GPS1;ENST00000392357.1_1_17:80012338-80013241:+|nuORF;nc|ENSG00000169727|Q13098-6|GPS1;nc|ENSG00000169727|Q13098-7|GPS1;nc|ENSG00000169727|Q13098|GPS1 72.96794272382148 0.0199516581995792 3 [{I|L}A]TK{I|L}NVY{I|L} 9 5 + 61.59 0.0 0.0 5.9587 5.9587 82.856 0.0 0.0 0.0 4.698277070169844 14.09256854528806 4.698277070169844 4.698277070169844 0 0.8494850021680094 1.0457574905606752 1.841129063296272 0.0 [{I|L}A]TK{I|L}NVY{I|L};[{I|L}T]AK{I|L}NVY{I|L};[{I|L}A]TK{I|L}VNY{I|L};[{I|L}A]TK{I|L}GGVY{I|L};{[NV]|[RG]}{I|L}KVSVY{I|L};[VS]VK{I|L}NVY{I|L};[{I|L}T]AK{I|L}VNY{I|L};[{I|L}T]AK{I|L}GGVY{I|L};[K{I|L}][TA]{I|L}NVY{I|L};[{I|L}A]GTV[KA]VY{I|L} 5.9587;5.5041;5.0861;5.0678;4.8163;4.7253;4.6316;4.6132;4.5479;4.4222 -;-;-;-;+;-;-;-;-;- + 6459 1 0.913 179716.9 1.0 12003 5727 17715 HBL1_DMSO_200M_050219_1,17732 HBL1_DMSO_200M_050219_1,17732,NVIKVSVYL True True NVIKVSVYL 84.840338 517.816210925579 15163404.0 17715.0 nc|ENSG00000169727|Q13098|GPS1;;ENST00000392357.1_1_17:80012338-80013241:+|nuORF;;nc|ENSG00000169727|Q13098-7|GPS1;;nc|ENSG00000169727|Q13098-6|GPS1;;ENSG00000169727|ENST00000578552|GPS1 5.953868230183919 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17733 84.842 60.0 1005800.0 25 0 186480.0 8747 EVQLMRLL 8 111 501.2930801911318 0 501.2939636111259 PEAK CID FTMS 0 0 0 17715 380192.3125 1.0 0 0.0 18 Unmodified _EVQLMRLL_ ENSG00000125863|ENST00000347364|MKKS 24.020572477871973 0.3419822013253964 3 {I|L}{M(Oxidation (M))|F}S{I|L} 4 5 21.397 0.0 0.0 2.1385 0.0 0.0 131.09621790003865 406.18586145572505 537.2820793557637 0.0 0.0 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}S{I|L} 2.1385 - 165 + 1 0.913 52204.3 1.0 12004 5727 17715 HBL1_DMSO_200M_050219_1,17733 HBL1_DMSO_200M_050219_1,17733,EVQLMRLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17734 84.846 246.0 323930.0 25 0 63239.0 + 16192 IVIDELEEMVT 11 54 430.88824457631785 0 430.8884460330009 PEAK CID FTMS 0 0 0 17715 340770.46875 0.7061958683417563 52 -5.110359191894531 19 Unmodified _IVIDELEEMVT_ REV__ENSG00000113272|ENST00000231198|THG1L 6.2057823575117 0.47618401536486 3 PP 2 -1 7.9588 0.0 0.0 0.9257 0.0 0.0 128.4236316313482 534.2086886041624 662.6323202355106 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.9257 - 27 + 1 0.913 70787.7 1.0 12005 5727 17715 HBL1_DMSO_200M_050219_1,17734 HBL1_DMSO_200M_050219_1,17734,IVIDELEEMVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17735 84.855 422.0 183140.0 25 0 41328.0 -1 TIVPRWMRVRR 11 98 743.4346809817043 1484.8548090302086 2 743.4354125857353 MULTI CID FTMS 0 0 0 17715 316850.28125 1.0 0 0.0 20 Oxidation (M) _TIVPRWM(Oxidation (M))RVRR_ ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB 1.3295316138638542 0.8688751186870782 3 {I|L} 1 -1 9.8329 0.0 0.0 0.66221 0.0 0.0 1353.7595769518866 0.0 1353.7595769518866 0.0 6.338031200885155 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.66221 + + 36 + 1 0.913 69590.2 1.0 12006 5727 17715 HBL1_DMSO_200M_050219_1,17735 HBL1_DMSO_200M_050219_1,17735,TIVPRWMRVRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17737 84.859 21.0 3621700.0 25 0 512850.0 + 9872 FPFKPPSI 8 77 466.7657004369864 931.5168479407728 2 466.7659484744072 MULTI CID FTMS 0 0 0 17736 2448072.0 0.6022811836027128 3 -0.263427734375 1 Unmodified _FPFKPPSI_ ENSG00000160087|ENST00000349431|UBE2J2;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2 41.8396318013385 0.2035142800366642 3 {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPPS{I|L} 8 0 + 64.277 0.0 0.0 6.9002 6.9002 84.269 0.0 0.0 0.0 11.697150495474986 8.57840941039747 8.57840941039747 3.450528104279016 0 0.805462187404089 0.0 0.3807196863200844 0.0 + + {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPPS{I|L};{M(Oxidation (M))|F}{I|L}MKPPS{I|L};{M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPPTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[W{I|L}]{I|L}E;{M(Oxidation (M))|F}{I|L}MKPPTV;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPV[TP];{M(Oxidation (M))|F}{I|L}MKPV[TP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[W{I|L}]E{I|L};{M(Oxidation (M))|F}{I|L}[W{I|L}]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[W{I|L}]E{I|L} 6.9002;6.5298;5.9793;5.6445;5.6089;5.52;5.1496;5.0336;2.4485;1.4289 +;-;-;-;-;-;-;-;-;- + 169 + 1 0.913 65680.2 1.0 12007 5728 17736 HBL1_DMSO_200M_050219_1,17737 HBL1_DMSO_200M_050219_1,17737,FPFKPPSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17738 84.86 13.0 3894400.0 25 0 1009300.0 + 23272 LSWLTLLLR 9 59 557.8503559949683 1113.6861590567364 2 557.8510009646416 MULTI CID FTMS 0 0 0 17736 2543959.75 0.0624643169399229 7 -0.6178359985351562 2 Unmodified _LSWLTLLLR_ REV__ENST00000483825.5_1_1:167404074-167487702:-|nuORF 6.2057823575117 0.6980434486082533 3 {I|L} 1 -1 10.596 0.0 0.0 0.95143 0.0 0.0 982.591552588766 0.0 982.591552588766 0.0 -9.581355631008268 -9.581355631008268 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.95143 + + 6 + 1 0.913 45646.0 1.0 12008 5728 17736 HBL1_DMSO_200M_050219_1,17738 HBL1_DMSO_200M_050219_1,17738,LSWLTLLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17739 84.862 24.0 2244400.0 25 0 219050.0 + -1 VPELARHC 8 79 491.25015776628527 980.4857625993706 2 491.2506286501884 MULTI CID FTMS 0 0 0 17736 1849323.75 1.0 0 0.0 3 Carbamidomethyl (C) _VPELARHC(Carbamidomethyl (C))_ REV__ENSG00000145283|ENST00000273905|SLC10A6 12.531546534597751 0.7257836412119636 3 VP{I|L} 3 -1 20.802 0.0 0.0 2.1216 0.0 0.0 653.2698945347206 0.0 653.2698945347206 0.0 1.0923492859777897 0.0 0.0 0 0.0 0.0 0.0 0.0 VP{I|L} 2.1216 - 108 + 1 0.913 46714.4 1.0 12009 5728 17736 HBL1_DMSO_200M_050219_1,17739 HBL1_DMSO_200M_050219_1,17739,VPELARHC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17740 84.863 41.0 1556100.0 25 0 182620.0 + 10781 FYPPPRITL 9 68 552.3158791596387 1102.617205386077 2 552.3159667849541 MULTI CID FTMS 0 0 0 17736 915802.8125 0.6160490527047249 5 -0.4929885864257812 4 Unmodified _FYPPPRITL_ ENSG00000102221|ENST00000614628|JADE3 13.90604991867851 0.4602628045680013 3 PP[YE] 4 7 20.445 0.0 0.0 1.8543 0.0 0.0 598.381116441374 0.0 598.381116441374 0.0 0.9466689260282344 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PP[YE] 1.8543 - 51 1 0.913 54566.5 1.0 12010 5728 17736 HBL1_DMSO_200M_050219_1,17740 HBL1_DMSO_200M_050219_1,17740,FYPPPRITL False True FYPPPRITL 84.862769 552.315966784954 247748900.0 17736.0 ENSG00000102221|ENST00000614628|JADE3 5.236529032389323 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17741 84.869 342.0 603010.0 25 0 96424.0 1618 ALLTFDTGC 9 142 314.15321840409246 939.4378258124774 3 314.1531249880791 MULTI CID FTMS 0 0 0 17736 702017.1875 0.1836281676881714 6 -0.5776290893554688 5 Unmodified _ALLTFDTGC_ ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF 23.1484247019978 0.2366544122328345 3 A{I|L}S 3 7 49.609 0.0 0.0 5.2807 0.0 0.0 0.0 665.261801992792 665.261801992792 39.43189054624234 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.3807196863200844 0.0 A{I|L}S 5.2807 - 96 + 1 0.913 166854.9 1.0 12011 5728 17736 HBL1_DMSO_200M_050219_1,17741 HBL1_DMSO_200M_050219_1,17741,ALLTFDTGC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17742 84.87 44.0 1449600.0 25 0 219750.0 + 12260 GQYSHLVLL 9 106 515.2905989743548 1028.5666450155095 2 515.2911865115166 MULTI CID FTMS 0 0 0 17736 670292.25 0.6000128230390401 -1 0.0639114379882812 6 Unmodified _GQYSHLVLL_ ENSG00000080608|ENST00000397885|PUM3 41.8396318013385 0.0653578398400075 3 [VS]{I|L}HY{[QG]|[NA]}{I|L}{I|L} 9 7 + 53.444 0.0 0.0 5.1959 5.1959 82.208 0.0 0.0 0.0 6.53212513775344 16.478174818886373 6.53212513775344 6.53212513775344 0 0.5 1.6989700043360187 0.2887254899964357 0.3494850021680094 [VS]{I|L}HY{[QG]|[NA]}{I|L}{I|L};{[TV]|[{I|L}S]}HY{[QG]|[NA]}V{I|L}{I|L};[VS][WQ]{[QG]|[NA]}V{I|L}{I|L};{[TV]|[{I|L}S]}HVY{[QG]|[NA]}{I|L}{I|L};{[TV]|[{I|L}S]}HYV{[QG]|[NA]}{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}{[WN]|[YH]}{I|L}{I|L};[VS][WQ]V{[QG]|[NA]}{I|L}{I|L};{[TV]|[{I|L}S]}VHY{[QG]|[NA]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QK{[WN]|[YH]}{I|L}{I|L};[AG]G{[DS]|[MA]|[CV]|TT}{[QG]|[NA]}{I|L}V{I|L}{I|L} 5.1959;4.5609;4.5436;4.2682;4.2682;4.251;4.251;4.1467;4.1022;3.6645 -;-;-;-;-;-;-;-;-;- 660 1 0.913 51970.9 1.0 12012 5728 17736 HBL1_DMSO_200M_050219_1,17742 HBL1_DMSO_200M_050219_1,17742,GQYSHLVLL True True GQYSHLVLL 84.870188 515.291186511517 10937181.0 17736.0 ENSG00000080608|ENST00000397885|PUM3 3.598899523417155 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17743 84.871 43.0 879820.0 25 0 100430.0 + 25691 NIANHFFTV 9 78 531.7726098719421 1061.530666810684 2 531.7724487185478 MULTI CID FTMS 0 0 0 17736 629090.9375 0.7998274548606611 -3 0.3070220947265625 7 Unmodified _NIANHFFTV_ ENSG00000117143|ENST00000367925|UAP1;nc|ENSG00000117143|Q16222-2|UAP1;nc|ENSG00000117143|Q16222-3|UAP1 16.942295170755138 0.3780752226737986 3 {[QV]|[N{I|L}]|[RA]|[KV]}S 3 7 22.192 0.0 0.0 2.0905 0.0 0.0 0.0 744.3473226546872 744.3473226546872 4.246199743006045 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}S 2.0905 - 81 1 0.913 37139.7 1.0 12013 5728 17736 HBL1_DMSO_200M_050219_1,17743 HBL1_DMSO_200M_050219_1,17743,NIANHFFTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17744 84.879 433.0 713430.0 25 0 126460.0 + 8099 EPFYVEVV 8 169 327.8357409608257 980.4853934826772 3 327.8356506228447 MULTI CID FTMS 0 0 0 17736 503004.53125 0.624852047346402 -3 0.3070220947265625 8 Unmodified _EPFYVEVV_ REV__ENSG00000169851|ENST00000695919|PCDH7;REV__nc|ENSG00000169851|O60245-2|PCDH7;REV__nc|ENSG00000169851|O60245|PCDH7 20.453626601364224 0.6087503291685402 3 VVQA 4 -1 35.795 0.0 0.0 3.6507 0.0 0.0 0.0 580.2330831762807 580.2330831762807 19.372048522619195 0.0 0.0 0.0 0 0.1382104921644452 0.0 0.0 0.8494850021680094 VVQA 3.6507 - 1067 + 1 0.913 245835.1 1.0 12014 5728 17736 HBL1_DMSO_200M_050219_1,17744 HBL1_DMSO_200M_050219_1,17744,EPFYVEVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17745 84.885 344.0 442420.0 25 0 45078.0 + 22727 LQIEDFEARIA 11 132 652.8459525802649 1303.6773522273295 2 652.8466674685478 MULTI CID FTMS 0 0 0 17736 447779.40625 1.0 0 0.0 9 Unmodified _LQIEDFEARIA_ ENSG00000186010|ENST00000507754|NDUFA13;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13 67.08073823543168 0.0408645806987127 3 {I|L}Q{I|L}ED{M(Oxidation (M))|F}EARA{I|L} 11 2 + 101.2 0.0 0.0 7.7624 7.7624 94.462 0.0 0.0 0.0 60.3062717846376 8.864883901399523 8.864883901399523 12.871259147553433 0 1.5 1.3979400086720375 1.3494850021680094 0.4247425010840047 {I|L}Q{I|L}ED{M(Oxidation (M))|F}EARA{I|L};{I|L}Q{I|L}ED{M(Oxidation (M))|F}[Q{I|L}]W{I|L};{I|L}K{I|L}ED{M(Oxidation (M))|F}EARA{I|L};{I|L}[AG]{I|L}ED{M(Oxidation (M))|F}EARA{I|L};{I|L}K{I|L}ED{M(Oxidation (M))|F}[Q{I|L}]W{I|L};{I|L}Q{I|L}EW[{M(Oxidation (M))|F}E]RA{I|L};{I|L}[AG]{I|L}ED{M(Oxidation (M))|F}[Q{I|L}]W{I|L};{I|L}Q{I|L}E{[DA]|[EG]}[{M(Oxidation (M))|F}E]RA{I|L};{I|L}K{I|L}EW[{M(Oxidation (M))|F}E]RA{I|L};[Q{I|L}]E[{M(Oxidation (M))|F}T]E{I|L}A{I|L}Q{I|L} 7.7624;6.7751;6.6901;5.9899;5.7028;5.3579;4.9998;4.6549;4.2856;4.2156 -;-;-;-;-;-;-;-;-;- 741 + 1 0.913 122745.8 1.0 12015 5728 17736 HBL1_DMSO_200M_050219_1,17745 HBL1_DMSO_200M_050219_1,17745,LQIEDFEARIA True True LQIEDFEARIA 84.885336 652.846667468548 3357820.5 17736.0 ENST00000586674.1_1_19:19627047-19643527:+|nuORF;;nc|ENSG00000186010|Q9P0J0-2|NDUFA13;;ENSG00000186010|ENST00000507754|NDUFA13 5.952763557434082 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17746 84.887 70.0 806750.0 25 0 68973.0 + 22961 YLITGNLEKL 10 90 581.329401324827 1160.644249716454 2 582.3348266482353 MULTI CID FTMS 0 0 0 17736 354071.40625 0.0941140494038984 -5 0.4647369384765625 10 Unmodified _LSFIEALIQQ_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 20.453626601364224 0.5043500229302764 3 {[TV]|[{I|L}S]}{[QG]|[NA]}E{I|L}K{I|L} 8 6 24.359 0.0 0.0 2.0987 0.0 0.0 0.0 289.11773539444147 289.11773539444147 2.3957751657678727 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2742275032520141 0.4247425010840047 {[TV]|[{I|L}S]}{[QG]|[NA]}E{I|L}K{I|L} 2.0987 - 130 1 0.913 48858.6 1.0 12016 5728 17736 HBL1_DMSO_200M_050219_1,17746 HBL1_DMSO_200M_050219_1,17746,LSFIEALIQQ False False YLITGNLEKL 84.887 582.334826648235 3264582.25 17736.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 2.918581167856852 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17747 84.894 372.0 429570.0 25 0 16919.0 + 30666 RFPEELTQTF 10 172 634.3192064214766 1266.623859909753 2 634.3187744021416 MULTI CID FTMS 0 0 0 17736 376065.0625 0.4599051365175948 17 -1.65087890625 11 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 76.82478488871298 0.0187167883027705 3 [QT][SG]RE{I|L}TQT{M(Oxidation (M))|F} 11 5 + 88.491 0.0 0.0 6.9864 6.9864 82.592 0.0 0.0 0.0 2.3395974085850924 14.555017243220403 2.3395974085850924 2.3395974085850924 0 1.0 0.3010299956639812 2.105627050040693 1.2856668758921828 [QT][SG]RE{I|L}TQT{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}MRE{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ERE{I|L}TQT{M(Oxidation (M))|F};[AG]T[SG]RE{I|L}TQT{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};{[SA]|[TG]}A[SG]RE{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{[VA]|[{I|L}G]}E{I|L}TQT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}M[TP]E{I|L}TQT{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}][EP]E{I|L}TQT{M(Oxidation (M))|F};[QT][SG]RE{I|L}T[AG]T{M(Oxidation (M))|F} 6.9864;6.8017;6.7342;6.7323;6.6268;6.5928;6.3853;6.3266;6.3126;6.2657 -;-;-;-;-;-;-;-;+;- + 19466 1 0.913 124727.9 1.0 12017 5728 17736 HBL1_DMSO_200M_050219_1,17747 HBL1_DMSO_200M_050219_1,17747,RFPEELTQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17748 84.896 88.0 657050.0 25 0 111960.0 -1 0 69 657.3445568666086 1969.0118412000256 3 657.3457519412041 MULTI CID FTMS 0 0 0 17736 355992.90625 0.4951448153584186 -4 0.3674468994140625 12 3 [{I|L}T][HS]{I|L} 5 -1 26.963 0.0 0.0 1.3694 0.0 0.0 0.0 1414.6819211162945 1414.6819211162945 4.5669497181587815 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}T][HS]{I|L} 1.3694 - 173 1 0.913 51949.1 1.0 12018 5728 17736 HBL1_DMSO_200M_050219_1,17748 HBL1_DMSO_200M_050219_1,17748, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17749 84.903 381.0 381950.0 25 0 26600.0 29660 QNRRYHFLSSL 11 129 710.8747110352975 1419.734869137395 2 710.8755981326103 MULTI CID FTMS 0 0 0 17736 324955.5625 0.8998716901719622 -1 0.0639114379882812 13 Unmodified _QNRRYHFLSSL_ nc|ENSG00000187045|Q8IU80-2|TMPRSS6 21.53697664764585 0.586507868110548 3 {[TV]|[{I|L}S]}TVMDNQ{I|L}VTS{I|L} 13 10 + 94.655 0.0 0.0 6.6671 6.6671 80.613 0.0 0.0 0.0 10.585456211725202 11.448658907276368 10.585456211725202 1.734141530345056 0 1.3182503180159344 1.2218487496163564 1.581883171732979 0.7742275032520141 {[TV]|[{I|L}S]}TVMDNQ{I|L}VTS{I|L};{[TV]|[{I|L}S]}{I|L}SMDNQ{I|L}VTS{I|L};{[TV]|[{I|L}S]}TVMDGGQ{I|L}VTS{I|L};{[TV]|[{I|L}S]}TVMDN[AG]{I|L}VTS{I|L};{[MG]|[TS]}{I|L}VMDNQ{I|L}VTS{I|L};{[TV]|[{I|L}S]}{I|L}SMDN[AG]{I|L}VTS{I|L};{[TV]|[{I|L}S]}{I|L}SMDGGQ{I|L}VTS{I|L};[{I|L}T]SVMDNQ{I|L}VTS{I|L};[{I|L}T]VSMDNQ{I|L}VTS{I|L};[{I|L}V]TSMDNQ{I|L}VTS{I|L} 6.6671;6.545;6.0281;6.0281;5.9215;5.9059;5.9059;5.8379;5.7157;5.6835 -;-;-;-;-;-;-;-;-;- 3584 1 0.913 109079.3 1.0 12019 5728 17736 HBL1_DMSO_200M_050219_1,17749 HBL1_DMSO_200M_050219_1,17749,QNRRYHFLSSL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17750 84.907 211.0 753100.0 25 0 55599.0 27085 PFACKSAL 8 124 418.71879975382 0 418.7188903689384 PEAK CID FTMS 0 0 0 17736 322156.4375 0.3744736884165682 -3 0.3070220947265625 14 Unmodified _PFACKSAL_ ENSG00000256463|ENST00000537592|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3 11.114462752807354 0.5290325060821968 3 NWK 3 7 10.985 0.0 0.0 1.3149 0.0 0.0 276.11124528919646 128.0720614068969 404.1833066960934 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6203715150305281 NWK 1.3149 - 85 + 1 0.913 125495.8 1.0 12020 5728 17736 HBL1_DMSO_200M_050219_1,17750 HBL1_DMSO_200M_050219_1,17750,PFACKSAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17751 84.912 223.0 548360.0 25 0 62785.0 + -1 MLVAVVVNI 9 144 487.289371931678 972.564190930156 2 487.2895995974541 MULTI CID FTMS 0 0 0 17736 311188.25 0.016520678065657 14 -1.3882522583007812 15 Oxidation (M) _M(Oxidation (M))LVAVVVNI_ REV__ENSG00000100346|ENST00000402142|CACNA1I;REV__nc|ENSG00000100346|Q9P0X4-2|CACNA1I;REV__nc|ENSG00000100346|Q9P0X4-3|CACNA1I;REV__nc|ENSG00000100346|Q9P0X4-4|CACNA1I 34.18733598223924 0.1073653526364521 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV 9 -1 + 42.629 0.0 0.0 4.3832 4.3832 73.258 0.0 0.0 0.0 3.22559982972642 26.68011552152894 3.22559982972642 1.7609125905568137 0 0.4247425010840047 0.8538719643217619 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}VGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGVQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GVQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVG[AG]VV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}VG[AG]VV;[VP]Y{I|L}VGQVV;[{I|L}V]{M(Oxidation (M))|F}{I|L}VGQVV 4.3832;4.2021;3.6645;3.4834;3.4834;3.4364;3.3024;3.2553;3.2308;3.1446 -;-;-;-;-;-;-;-;-;- 2668 1 0.913 95945.5 1.0 12021 5728 17736 HBL1_DMSO_200M_050219_1,17751 HBL1_DMSO_200M_050219_1,17751,MLVAVVVNI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17752 84.919 426.0 159060.0 25 0 17661.0 -1 0 97 920.92469341024 1839.83483388728 2 920.9257690310478 MULTI CID FTMS 0 0 0 17736 259007.9375 0.4518959803099776 3 -0.263427734375 16 3 {[DA]|[EG]}V 3 -1 32.447 0.0 0.0 1.7636 0.0 0.0 0.0 1551.6792302097988 1551.6792302097988 14.61151983220164 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V 1.7636 - 372 1 0.913 50272.5 1.0 12022 5728 17736 HBL1_DMSO_200M_050219_1,17752 HBL1_DMSO_200M_050219_1,17752, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17753 84.929 526.0 473220.0 25 0 38343.0 + 18863 LASQHEEL 8 249 309.490381674979 925.449315625137 3 309.4901611208916 MULTI CID FTMS 0 0 0 17736 267508.40625 0.526437752567641 11 -1.0654449462890625 17 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 3 {I|L}{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 1.7779 0.0 0.0 647.3014341531257 0.0 647.3014341531257 0.0 2.95880017344075 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.7779 - 307 1 0.913 198313.6 1.0 12023 5728 17736 HBL1_DMSO_200M_050219_1,17753 HBL1_DMSO_200M_050219_1,17753,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17754 84.936 411.0 591550.0 25 0 50113.0 + 6678 EAYPHFMSI 9 220 547.7521049479979 1093.4896569627956 2 547.7526733279228 MULTI CID FTMS 0 0 0 17736 265984.65625 0.7337129516943868 -3 0.3070220947265625 18 Unmodified _EAYPHFMSI_ ENSG00000100592|ENST00000360909|DAAM1;ENST00000556894.1_1_14:59791074-59792827:+|nuORF;nc|ENSG00000100592|Q9Y4D1-3|DAAM1;nc|ENSG00000100592|Q9Y4D1|DAAM1 85.35673624503755 0.0162188719545379 3 {[QN]|[E{I|L}]|[KN]}CPH{M(Oxidation (M))|F}MS 8 3 22.451 0.0 0.0 2.0531 0.0 0.0 0.0 146.07885113908483 146.07885113908483 -1.1025655126251586 0.0 -1.1025655126251586 0.0 0 0.0 0.638272163982407 0.5 0.0 {[QN]|[E{I|L}]|[KN]}CPH{M(Oxidation (M))|F}MS 2.0531 - 6961 1 0.913 186520.0 1.0 12024 5728 17736 HBL1_DMSO_200M_050219_1,17754 HBL1_DMSO_200M_050219_1,17754,EAYPHFMSI True True EAYPHFMSI 84.936092 547.752673327923 4944950.0 17736.0 ENST00000556894.1_1_14:59791074-59792827:+|nuORF;;nc|ENSG00000100592|Q9Y4D1-3|DAAM1;;nc|ENSG00000100592|Q9Y4D1|DAAM1;;ENSG00000100592|ENST00000360909|DAAM1 7.32552973429362 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17755 84.945 503.0 305870.0 25 0 30915.0 18627 LAFLVLYNFII 11 156 442.60092637522587 1324.7809497258777 3 442.6010925173759 MULTI CID FTMS 0 0 0 17736 232810.640625 0.1838200111862155 5 -0.4929885864257812 19 Unmodified _LAFLVLYNFII_ ENSG00000058063|ENST00000323116|ATP11B 6.723162845929126 0.8434276150410019 3 [{I|L}A]SMPS{I|L}A 8 8 55.302 0.0 0.0 4.1744 0.0 0.0 0.0 551.3590244794372 551.3590244794372 34.65984668286913 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.4947026752325154 0.0 [{I|L}A]SMPS{I|L}A 4.1744 - 2030 1 0.913 139242.0 1.0 12025 5728 17736 HBL1_DMSO_200M_050219_1,17755 HBL1_DMSO_200M_050219_1,17755,LAFLVLYNFII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17756 84.954 413.0 154250.0 25 0 26654.0 37962 TMKRLLAHRSL 11 118 663.3981260393479 1324.7816991454956 2 663.3997070193291 MULTI CID FTMS 0 0 0 17736 227617.734375 0.237436846106935 6 -0.5776290893554688 20 Unmodified _TMKRLLAHRSL_ ENSG00000116218|ENST00000367615|NPHS2 5.731851221503515 0.8481046878870278 3 {I|L} 1 10 12.218 0.0 0.0 0.9223 0.0 0.0 1193.686772242955 0.0 1193.686772242955 0.0 0.9594276311945648 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.9223 + + 155 + 1 0.913 58801.6 1.0 12026 5728 17736 HBL1_DMSO_200M_050219_1,17756 HBL1_DMSO_200M_050219_1,17756,TMKRLLAHRSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17758 84.97 750.0 333620.0 25 0 35945.0 + 30137 QVLSHMPGV 9 238 323.17292601904586 966.4969486573376 3 323.1731445193291 MULTI CID FTMS 0 0 0 17757 192167.03125 0.3383314335237764 -2 0.1623687744140625 1 Unmodified _QVLSHMPGV_ REV__ENSG00000066739|ENST00000359933|ATG2B;REV__ENST00000261834.9_1_14:96756535-96777546:-|nuORF 12.531546534597751 0.4974689918368763 3 {[QV]|[N{I|L}]|[RA]|[KV]}[PS]NG 6 -1 19.319 0.0 0.0 1.9988 0.0 0.0 0.0 381.2137394385096 381.2137394385096 7.329110239154495 0.0 0.0 0.0 0 0.0 0.6777807052660807 0.6109243748081782 0.8807196863200843 {[QV]|[N{I|L}]|[RA]|[KV]}[PS]NG 1.9988 - 344 1 0.915 200529.2 1.0 12027 5729 17757 HBL1_DMSO_200M_050219_1,17758 HBL1_DMSO_200M_050219_1,17758,QVLSHMPGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17759 84.971 24.0 4149100.0 25 0 567060.0 + 35840 SVLDQKILL 9 122 514.8211598045917 1027.6277666759834 2 514.8221923708916 MULTI CID FTMS 0 0 0 17757 1186911.5 0.2191084170027148 -3 0.2580642700195312 2 Unmodified _SVLDQKILL_ ENSG00000142207|ENST00000382751|URB1 43.77239144664712 0.0547478964384323 3 [VS]{I|L}DQK{I|L}{I|L}{I|L} 9 0 + 61.519 0.0 0.0 5.9865 5.9865 87.721 0.0 0.0 0.0 10.00508444608478 10.00508444608478 10.00508444608478 9.208187539523747 0 1.492992819099939 2.0 0.4247425010840047 0.0 + + [VS]{I|L}DQK{I|L}{I|L}{I|L};[VS]{I|L}D[AG]K{I|L}{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}{I|L}[VS]{I|L}{I|L};[VS]{[QG]|[NA]}{I|L}{I|L}[VS]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QK{I|L}[VS]{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}[VS]{I|L}{I|L}{I|L};[VS]{[QG]|[NA]}{I|L}[VS]{I|L}{I|L}{I|L};[AG]KD{I|L}{I|L}[VS]{I|L}{I|L};[AG]VEK{I|L}[VS]{I|L}{I|L};[AG]D{I|L}K{I|L}[VS]{I|L}{I|L} 5.9865;5.0905;5.0129;4.3495;3.9931;3.9623;3.2988;3.2839;3.2368;3.2368 +;-;-;-;-;-;-;-;-;- + 1899 + 1 0.915 77883.2 1.0 12028 5729 17757 HBL1_DMSO_200M_050219_1,17759 HBL1_DMSO_200M_050219_1,17759,SVLDQKILL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17760 84.972 42.0 2777000.0 25 0 262690.0 + 24554 MLDMSVPAV 9 73 962.4666777508772 961.4594012842772 1 962.4689819216728 MULTI CID FTMS 0 0 0 17757 936650.875 0.4315973649384664 -3 0.2580642700195312 3 Unmodified _MLDMSVPAV_ ENSG00000102910|ENST00000285737|LONP2 36.04419817259434 0.0971720506436186 3 [PA]MDYV 6 7 52.37 0.0 0.0 5.4469 0.0 0.0 0.0 282.1435897259659 282.1435897259659 31.414412723804546 0.0 0.0 0.0 0 0.8252574989159953 1.6989700043360187 0.9247425010840048 0.0 [PA]MDYV 5.4469 - 787 1 0.915 82194.2 1.0 12029 5729 17757 HBL1_DMSO_200M_050219_1,17760 HBL1_DMSO_200M_050219_1,17760,MLDMSVPAV True True MLDMSVPAV 84.972183 962.468981921673 20261804.0 17757.0 ENSG00000102910|ENST00000285737|LONP2 1.2344048221906023 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17761 84.975 124.0 562560.0 25 0 38390.0 -1 0 89 1037.9733608239028 2073.9321687146057 2 1037.972949206829 MULTI CID FTMS 0 0 0 17757 510108.6875 0.43371951298575 -2 0.1623687744140625 4 3 {[QS]|[NT]}[KA]{M(Oxidation (M))|F}VA[DP]TS{I|L}DG{M(Oxidation (M))|F} 15 -1 47.202 0.0 0.0 2.276 0.0 0.0 0.0 507.19288583790575 507.19288583790575 12.090854386686884 0.0 0.0 0.0 0 1.174742501084005 0.0 0.0 0.3807196863200844 {[QS]|[NT]}[KA]{M(Oxidation (M))|F}VA[DP]TS{I|L}DG{M(Oxidation (M))|F} 2.276 - 2621 1 0.915 51730.6 1.0 12030 5729 17757 HBL1_DMSO_200M_050219_1,17761 HBL1_DMSO_200M_050219_1,17761, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17762 84.982 394.0 234320.0 25 0 30933.0 -1 0 99 955.5244953991248 1909.0344378650493 2 955.524951159954 MULTI CID FTMS 0 0 0 17757 421879.75 1.0 0 0.0 5 3 TV{I|L}QV 5 -1 12.511 0.0 0.0 0.65538 0.0 0.0 1083.5725370855555 282.10981165103755 1365.6823487365932 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 TV{I|L}QV 0.65538 - 1956 + 1 0.915 69208.6 1.0 12031 5729 17757 HBL1_DMSO_200M_050219_1,17762 HBL1_DMSO_200M_050219_1,17762, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17763 84.985 174.0 965270.0 25 0 74224.0 + 24381 MFLSFPTTK 9 186 536.2811309810362 1070.5477090288723 2 536.2800781130791 MULTI CID FTMS 0 0 0 17757 336409.25 0.4378627995489708 -2 0.1623687744140625 6 Unmodified _MFLSFPTTK_ CON__P01966;ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1;ENST00000487791.1_1_16:226802-227261:+|nuORF 41.95555342248728 0.0647214845423414 3 M{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F}[NS]{I|L}{I|L} 9 4 + 59.487 0.0 0.0 5.5567 5.5567 77.09 0.0 0.0 0.0 16.478174818886373 2.9388929552626664 2.9388929552626664 1.7556065769590037 0 0.75 0.0 1.079689690656103 0.0 M{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F}[NS]{I|L}{I|L};M{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};M{M(Oxidation (M))|F}{I|L}SK[W{M(Oxidation (M))|F}]{I|L};M{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F}[TP]TK;M{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}TV;M{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F}[Q{I|L}]SV;M{M(Oxidation (M))|F}{I|L}SK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SV;M{M(Oxidation (M))|F}{I|L}SK[W{I|L}]{M(Oxidation (M))|F};M{M(Oxidation (M))|F}{I|L}S[YV][QA]{I|L};M{M(Oxidation (M))|F}{I|L}S[YV]{[NV]|[RG]}V 5.5567;5.3927;5.2875;5.2822;4.9823;4.9466;4.566;4.4439;3.7694;3.359 -;-;-;+;-;-;-;-;-;- + 1393 + 1 0.915 130564.4 1.0 12032 5729 17757 HBL1_DMSO_200M_050219_1,17763 HBL1_DMSO_200M_050219_1,17763,MFLSFPTTK True True MFLSFPTTK 84.985269 536.280078113079 9299954.0 17757.0 P01966;;ENSG00000206172|ENST00000320868|HBA1;;ENST00000487791.1_1_16:226802-227261:+|nuORF;;ENSG00000188536|ENST00000251595|HBA2 8.172656853993734 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 17764 84.994 470.0 307380.0 25 0 61012.0 + 14202 IDKLRRFLF 9 123 604.3665655421377 1206.7185781510752 2 604.3667480349541 MULTI CID FTMS 0 0 0 17757 286271.125 0.1608895877273205 -3 0.2580642700195312 7 Unmodified _IDKLRRFLF_ REV__ENSG00000131044|ENST00000535842|TTLL9;REV__nc|ENSG00000131044|Q3SXZ7-2|TTLL9 2.735195868890462 0.8191998628570236 3 {I|L} 1 -1 9.6041 0.0 0.0 0.79589 0.0 0.0 1075.6235749545892 0.0 1075.6235749545892 0.0 0.7817360042996171 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.79589 + + 115 + 1 0.915 105952.7 1.0 12033 5729 17757 HBL1_DMSO_200M_050219_1,17764 HBL1_DMSO_200M_050219_1,17764,IDKLRRFLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17765 85.007 769.0 352680.0 25 0 50712.0 + 7853 ELLHRRLLAS 10 181 403.2467035210808 1206.7182811634425 3 403.2467834353447 MULTI CID FTMS 0 0 0 17757 192682.90625 0.1887680919824 -4 0.4054794311523437 8 Unmodified _ELLHRRLLAS_ REV__ENSG00000205593|ENST00000413817|DENND6B;REV__ENST00000495607.5_1_22:50750570-50752368:-|nuORF 1.9063754702782607 0.7178183895776981 3 [{I|L}T]TS 4 -1 19.271 0.0 0.0 1.5969 0.0 0.0 0.0 801.4712769164306 801.4712769164306 9.93832372871391 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.055462187404089 0.0 [{I|L}T]TS 1.5969 - 84 1 0.915 208650.7 1.0 12034 5729 17757 HBL1_DMSO_200M_050219_1,17765 HBL1_DMSO_200M_050219_1,17765,ELLHRRLLAS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17766 85.017 549.0 394760.0 25 0 37449.0 + 33961 SLIDMRGIETV 11 165 617.3287093957417 1232.6428658582834 2 617.3299438357353 MULTI CID FTMS 0 0 0 17757 159105.078125 0.3551827739062286 -2 0.1623687744140625 9 Unmodified _SLIDMRGIETV_ ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6 62.78007862980855 0.0578623910948099 3 {[TV]|[{I|L}S]}{I|L}DSADT{I|L}VTV 12 5 + 92.487 0.0 0.0 7.5031 7.5031 81.548 0.0 0.0 0.0 17.391364583059683 15.406075122407684 15.406075122407684 0.8534811358448735 0 2.305462187404089 2.0 1.115356566548286 0.0 {[TV]|[{I|L}S]}{I|L}DSADT{I|L}VTV;{[TV]|[{I|L}S]}{I|L}DSAD{I|L}TVTV;{[TV]|[{I|L}S]}{I|L}DSGET{I|L}VTV;{[TV]|[{I|L}S]}{I|L}DSADTV{I|L}TV;{[TV]|[{I|L}S]}{I|L}DSGE{I|L}TVTV;{[TV]|[{I|L}S]}{I|L}DSAD{I|L}S{I|L}TV;{[TV]|[{I|L}S]}{I|L}DSATD{I|L}VTV;{[TV]|[{I|L}S]}EVSADT{I|L}VTV;{[TV]|[{I|L}S]}{I|L}DSAVETVTV;{[TV]|[{I|L}S]}{I|L}DSGETV{I|L}TV 7.5031;7.4339;7.2589;7.2553;7.1897;7.1861;7.1357;7.055;7.0468;7.0111 -;-;-;-;-;-;-;-;-;- 47965 1 0.915 158462.0 1.0 12035 5729 17757 HBL1_DMSO_200M_050219_1,17766 HBL1_DMSO_200M_050219_1,17766,SLIDMRGIETV True True SLIDMRGIETV 85.016564 617.329943835735 3284455.75 17757.0 nc|ENSG00000163029|Q96SB8-2|SMC6;;ENSG00000163029|ENST00000448223|SMC6 7.115982532501221 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17767 85.022 321.0 413090.0 25 0 58490.0 + 18317 KVLDLRINL 9 138 361.9006915744759 1082.6802453236278 3 361.9009887576103 MULTI CID FTMS 0 0 0 17757 157411.90625 0.3499947888294738 -3 0.2580642700195312 10 Unmodified _KVLDLRINL_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 53.40400417844725 0.0329064971918313 3 [R{I|L}]{NN|[MP]|[D{I|L}]|[EV]}N{I|L}VK{I|L} 9 5 + 50.741 0.0 0.0 4.6866 4.6866 74.931 0.0 0.0 0.0 2.186179694003471 16.478174818886373 2.186179694003471 2.186179694003471 0 0.7742275032520141 0.0 0.0 0.7134679910804405 [R{I|L}]{NN|[MP]|[D{I|L}]|[EV]}N{I|L}VK{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]N{I|L}VK{I|L};[R{I|L}]{NN|[MP]|[D{I|L}]|[EV]}VQVK{I|L};[R{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VK{I|L};[R{I|L}]{NN|[MP]|[D{I|L}]|[EV]}{I|L}NVK{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]VQVK{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}NVK{I|L};[R{I|L}]{NN|[MP]|[D{I|L}]|[EV]}VKAR{I|L};[R{I|L}]{NN|[MP]|[D{I|L}]|[EV]}GG{I|L}VK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[R{I|L}]D{I|L}VK{I|L} 4.6866;4.4847;4.4085;4.4085;4.2459;4.2066;4.044;3.8972;3.8361;3.697 -;-;-;-;-;-;-;-;-;- 945 1 0.915 110749.9 1.0 12036 5729 17757 HBL1_DMSO_200M_050219_1,17767 HBL1_DMSO_200M_050219_1,17767,KVLDLRINL True True KVLDLRINL 85.0224 361.90098875761 2825122.25 17757.0 nc|ENSG00000129003|Q709C8-3|VPS13C;;ENSG00000129003|ENST00000644861|VPS13C;;nc|ENSG00000129003|Q709C8-4|VPS13C;;nc|ENSG00000129003|Q709C8-2|VPS13C 1.119026601314545 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17768 85.036 739.0 318710.0 25 0 37172.0 + 12722 GVLTLIGSSI 10 222 480.2923743951735 958.570195857147 2 480.2921935915947 MULTI CID FTMS 0 0 0 17757 116739.0 0.0144062160751005 24 -2.303169250488281 11 Unmodified _GVLTLIGSSI_ REV__ENSG00000100342|ENST00000397278|APOL1;REV__nc|ENSG00000100342|O14791-2|APOL1;REV__nc|ENSG00000100342|O14791-3|APOL1 64.23631603340823 0.0254735623525308 3 [VG]{I|L}T{I|L}{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 + 41.626 0.0 0.0 4.3426 4.3426 73.028 0.0 0.0 0.0 3.4374928204257955 5.642492736872597 3.4374928204257955 1.7609125905568064 0 0.5 1.6989700043360187 0.535666875892183 0.0 [VG]{I|L}T{I|L}{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};[VG]{I|L}T{I|L}T{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[VA]|[{I|L}G]}VT{I|L}{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};{[VA]|[{I|L}G]}VT{I|L}T{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}{I|L}G{I|L}{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}K{I|L}{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}{I|L}G{I|L}T{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}K{I|L}T{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}T]VG{I|L}{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}T]VG{I|L}T{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 4.3426;4.1588;3.9839;3.8002;3.3451;3.3103;3.1614;3.1266;2.2321;2.0484 -;-;-;-;-;-;-;-;-;- 1542 1 0.915 175903.9 1.0 12037 5729 17757 HBL1_DMSO_200M_050219_1,17768 HBL1_DMSO_200M_050219_1,17768,GVLTLIGSSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17769 85.047 606.0 420490.0 25 0 29654.0 + + -1 AFHPFIAGPY 10 248 560.3027898481591 0 560.3039428591728 PEAK CID FTMS 0 0 0 17757 119221.90625 0.6338345200732902 -3 0.2580642700195312 12 Oxidation (M) _LAWM(Oxidation (M))RLSNL_ ENSG00000115677|ENST00000310931|HDLBP;nc|ENSG00000115677|Q00341-2|HDLBP 15.847184025352805 0.2451986057151378 3 T{I|L}VP 4 -1 20.767 0.0 0.0 1.8566 0.0 0.0 334.1751651378282 371.1410311334594 705.3161962712876 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 T{I|L}VP 1.8566 - 2582 + 1 0.915 195736.2 1.0 12038 5729 17757 HBL1_DMSO_200M_050219_1,17769 HBL1_DMSO_200M_050219_1,17769,LAWMRLSNL False False AFHPFIAGPY 85.04696 560.303942859173 441343.0625 17757.0 ENSG00000115677|ENST00000310931|HDLBP;;nc|ENSG00000115677|Q00341-2|HDLBP 4.846874872843425 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17770 85.058 651.0 186120.0 25 0 46695.0 -1 0 118 971.0099705168992 0 971.010302722454 PEAK CID FTMS 0 0 0 17757 116469.5625 1.0 0 0.0 13 3 {I|L}{I|L}{I|L} 3 -1 11.972 0.0 0.0 0.61713 0.0 0.0 1086.4749448406358 511.2547701471312 1597.729714987767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L} 0.61713 - 1424 + 1 0.915 87208.4 1.0 12039 5729 17757 HBL1_DMSO_200M_050219_1,17770 HBL1_DMSO_200M_050219_1,17770, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17771 85.07 591.0 92177.0 25 0 8388.3 -1 CCCHWCSWSC 10 111 637.6872781518651 0 637.3510009646416 PEAK CID FTMS 0 0 0 17757 75602.4609375 0.8069179992773929 -2 0.1623687744140625 14 Carbamidomethyl (C) _C(Carbamidomethyl (C))CCHWCSWSC_ ENST00000440083.6_1_12:6443346-6451099:-|nuORF 0.0 0.3961065659209837 3 {I|L}C 2 -1 7.0783 0.0 0.0 0.55588 0.0 0.0 652.0529267056997 402.18125330142817 1054.234180007128 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}C 0.55588 - 109 + 1 0.915 49009.5 1.0 12040 5729 17757 HBL1_DMSO_200M_050219_1,17771 HBL1_DMSO_200M_050219_1,17771,CCCHWCSWSC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17772 85.08 587.0 108470.0 25 0 5150.6 + + -1 LQMEEEYIQQL 11 135 713.3452063945464 0 713.1124145388603 PEAK CID FTMS 0 0 0 -1 0 15 2 Carbamidomethyl (C) _QELALC(Carbamidomethyl (C))KC(Carbamidomethyl (C))YQL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 8.745405648335112 0.4618489994582195 3 N{I|L}WWAV{I|L}AA 9 -1 18.427 0.0 0.0 1.2934 0.0 0.0 230.0353091740552 167.08301721744377 397.11832639149895 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N{I|L}WWAV{I|L}AA 1.2934 - 1333 + 1 0.915 54863.1 1.0 12041 5729 17757 HBL1_DMSO_200M_050219_1,17772 HBL1_DMSO_200M_050219_1,17772,QELALCKCYQL False False LQMEEEYIQQL 85.080149 713.11241453886 3153123.75 17757.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 4.547727743784587 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17773 85.085 273.0 255950.0 25 0 26267.0 + 4635 DAYVLPKL 8 101 459.7681216570748 917.5216903809496 2 459.7679931521416 MULTI CID FTMS 0 0 0 17757 91087.7890625 0.742789501085461 -1 0.0984573364257812 16 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 28.486842064014134 0.4448922141344407 3 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 {[DA]|[EG]}Y + + 27.893 19.666 5.6329 3.04 3.04 50.27 0.0 0.0 0.0 0.0 8.226825097560422 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L} 3.04 + + 67 + 1 0.915 58738.0 1.0 12042 5729 17757 HBL1_DMSO_200M_050219_1,17773 HBL1_DMSO_200M_050219_1,17773,DAYVLPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17775 85.089 3.7 12850000.0 25 0 1807200.0 11822 GLPDAHLGL 9 69 446.74781623193104 891.4810795306621 2 446.7482482790947 MULTI CID FTMS 0 0 0 17774 16921792.0 0.821190687752015 1 -0.0332260131835937 1 Unmodified _GLPDAHLGL_ ENSG00000011451|ENST00000673675|WIZ;nc|ENSG00000011451|O95785-3|WIZ;nc|ENSG00000011451|O95785-4|WIZ;nc|ENSG00000011451|O95785|WIZ 23.1484247019978 0.2366544122328345 3 {[DA]|[EG]}{M(Oxidation (M))|F} 3 7 33.952 0.0 0.0 3.8085 0.0 0.0 0.0 555.328709964435 555.328709964435 -5.159940911636767 0.0 -5.159940911636767 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F} 3.8085 - 55 + 1 0.915 45265.3 1.0 12043 5730 17774 HBL1_DMSO_200M_050219_1,17775 HBL1_DMSO_200M_050219_1,17775,GLPDAHLGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17776 85.091 5.3 11153000.0 25 0 1546900.0 + 12862 GVVPQLVKL 9 68 476.8130743891318 951.6115958450636 2 476.8134033083916 MULTI CID FTMS 0 0 0 17774 9478661.0 0.1582539102585593 4 -0.3474273681640625 2 Unmodified _GVVPQLVKL_ ENSG00000182481|ENST00000330459|KPNA2 28.486842064014134 0.1687311288560894 3 [QP]{I|L}VK 5 4 34.437 0.0 0.0 3.6188 0.0 0.0 0.0 383.2298569136762 383.2298569136762 4.3753063169585005 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 + [QP]{I|L}VK 3.6188 + + 99 1 0.915 50657.4 1.0 12044 5730 17774 HBL1_DMSO_200M_050219_1,17776 HBL1_DMSO_200M_050219_1,17776,GVVPQLVKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17777 85.092 11.0 4585000.0 25 0 641650.0 + 14001 IAAWELSL 8 76 451.75254133747273 901.4905297417456 2 451.7527038455009 MULTI CID FTMS 0 0 0 17774 4873010.5 0.2088575870344506 -1 0.131744384765625 3 Unmodified _IAAWELSL_ REV__ENST00000343827.7_2_15:57511726-57511765:+|nuORF 34.18733598223924 0.3315367612694167 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 -1 52.44 0.0 0.0 5.817 0.0 0.0 0.0 199.108010500862 199.108010500862 33.3545023044571 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 5.817 - 212 1 0.915 46634.0 1.0 12045 5730 17774 HBL1_DMSO_200M_050219_1,17777 HBL1_DMSO_200M_050219_1,17777,IAAWELSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17778 85.093 12.0 4402400.0 25 0 760720.0 + 4647 DAYVLPKLY 9 70 541.2999781941046 1080.585403455009 2 541.3003417849541 MULTI CID FTMS 0 0 0 17774 3735708.0 0.0131965183563505 21 -1.9701156616210933 4 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 37.97399986684836 0.0865783450051559 3 {[DA]|[EG]}YV{I|L}PK{I|L}Y 9 0 {[DA]|[EG]}Y + + 34.513 19.666 5.6328 3.1939 3.1939 50.57 0.0 0.0 0.0 0.0 8.349621957594096 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L}Y 3.1939 + + 83 + 1 0.915 45440.5 1.0 12046 5730 17774 HBL1_DMSO_200M_050219_1,17778 HBL1_DMSO_200M_050219_1,17778,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17779 85.094 25.0 2448900.0 25 0 356720.0 + 6161 DTATLLLKL 9 84 494.3078292128518 986.6011054925036 2 494.3080932497978 MULTI CID FTMS 0 0 0 17774 2898883.5 0.3823659683513825 2 -0.1063690185546875 5 Unmodified _DTATLLLKL_ REV__ENSG00000250120|ENST00000307360|PCDHA10;REV__nc|ENSG00000250120|Q9Y5I2-2|PCDHA10;REV__nc|ENSG00000250120|Q9Y5I2-3|PCDHA10 64.23631603340823 0.0237365939569086 3 [TA]SE{I|L}{I|L}{I|L}K{I|L} 9 -1 + 61.436 0.0 0.0 6.227 6.227 92.873 0.0 0.0 0.0 28.230932472452977 11.706962271689749 11.706962271689749 61.43561866002287 0 1.25 2.0 0.0 0.2614393726401688 [TA]SE{I|L}{I|L}{I|L}K{I|L} 6.227 - 178 + 1 0.915 51012.5 1.0 12047 5730 17774 HBL1_DMSO_200M_050219_1,17779 HBL1_DMSO_200M_050219_1,17779,DTATLLLKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17780 85.095 25.0 3113100.0 25 0 435900.0 + 42845 VVLEEIPKL 9 83 520.3234595674286 1038.632366201657 2 520.3239623904228 MULTI CID FTMS 0 0 0 17774 2710585.25 0.551793353424996 -2 0.2302017211914062 6 Unmodified _VVLEEIPKL_ ENSG00000116266|ENST00000370008|STXBP3 51.629811660486645 0.0367964933207742 3 VV{I|L}EE{I|L}P[K{I|L}] 9 0 + 90.239 0.0 0.0 8.6882 8.6882 86.227 0.0 0.0 0.0 35.99362475384609 2.552725051033065 2.552725051033065 2.552725051033065 0 1.1549471895720984 2.0 0.805462187404089 0.0 + + VV{I|L}EE{I|L}P[K{I|L}];VV{I|L}EE{I|L}{I|L}[KP] 8.6882;8.4425 +;- + 230 + 1 0.915 65811.3 1.0 12048 5730 17774 HBL1_DMSO_200M_050219_1,17780 HBL1_DMSO_200M_050219_1,17780,VVLEEIPKL True True VVLEEIPKL 85.09533 520.323962390423 84399096.0 17774.0 ENSG00000116266|ENST00000370008|STXBP3 5.737311840057373 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17781 85.097 15.0 2906300.0 25 0 448810.0 -1 GEIYNHKKM 9 53 568.282695780671 1134.550838628142 2 568.2839233279228 MULTI CID FTMS 0 0 0 17774 2441964.0 0.3384981163314026 -2 0.2302017211914062 7 Oxidation (M) _GEIYNHKKM(Oxidation (M))_ ENSG00000070669|ENST00000394308|ASNS;ENST00000495255.1_1_7:97493514-97498468:-|nuORF;nc|ENSG00000070669|P08243-2|ASNS 15.847184025352805 0.4077185912009129 3 {[DA]|[EG]}{[YC]|[HE]}[PA]{I|L}RN{I|L} 10 -1 + 38.433 0.0 0.0 3.3875 3.3875 83.57 0.0 0.0 0.0 16.706962271689747 1.7385695813445068 1.7385695813445068 38.43326954115149 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}{[YC]|[HE]}[PA]{I|L}RN{I|L} 3.3875 - 39 + 1 0.915 38193.2 1.0 12049 5730 17774 HBL1_DMSO_200M_050219_1,17781 HBL1_DMSO_200M_050219_1,17781,GEIYNHKKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17782 85.098 15.0 3777300.0 25 0 350010.0 + 9849 FPFGKIGTV 9 72 483.2764472907161 964.5383416482322 2 483.2771789431572 MULTI CID FTMS 0 0 0 17774 2338700.5 0.1550238707013564 16 -1.554046630859375 8 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 24.020572477871973 0.2255576514309169 3 {M(Oxidation (M))|F}PE 3 7 30.445 0.0 0.0 3.1565 0.0 0.0 573.3495700238001 0.0 573.3495700238001 0.0 17.68110275043508 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}PE 3.1565 - 124 1 0.915 48158.9 1.0 12050 5730 17774 HBL1_DMSO_200M_050219_1,17782 HBL1_DMSO_200M_050219_1,17782,FPFGKIGTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17783 85.099 33.0 1638500.0 25 0 218930.0 + 25705 NIGEVVLSL 9 80 472.2768233005065 942.5390936678132 2 472.2769042849541 MULTI CID FTMS 0 0 0 17774 1999838.25 0.1718596468582976 -1 0.131744384765625 9 Unmodified _NIGEVVLSL_ REV__ENST00000482490.5_1_3:64554138-64554207:-|nuORF 32.30548876998284 0.1201446275138228 3 {[TV]|[{I|L}S]}[PS]Q{I|L} 6 -1 26.386 0.0 0.0 2.7995 0.0 0.0 0.0 314.17267456064434 314.17267456064434 6.152340397648857 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3252574989159953 0.0 {[TV]|[{I|L}S]}[PS]Q{I|L} 2.7995 - 424 1 0.915 45806.5 1.0 12051 5730 17774 HBL1_DMSO_200M_050219_1,17783 HBL1_DMSO_200M_050219_1,17783,NIGEVVLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17784 85.1 53.0 853140.0 25 0 81585.0 11180 GELSRKPRL 9 88 528.3199801443271 1054.6254073554542 2 528.8240844607353 MULTI CID FTMS 0 0 0 17774 711057.5 0.8749304403491195 -9 0.910736083984375 10 Unmodified _GELSRKPRL_ ENST00000265052.9_1_3:127410292-127410427:-|nuORF 11.640296217721598 0.521594087909532 3 A{I|L}DK{I|L}[R{I|L}]{I|L} 8 6 27.344 0.0 0.0 2.5928 0.0 0.0 114.01827041992642 0.0 114.01827041992642 0.0 5.9176003468815 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}DK{I|L}[R{I|L}]{I|L} 2.5928 - 62 + 1 0.915 40063.1 1.0 12052 5730 17774 HBL1_DMSO_200M_050219_1,17784 HBL1_DMSO_200M_050219_1,17784,GELSRKPRL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17785 85.102 57.0 361930.0 25 0 23154.0 + 37902 TLWPWLCW 8 57 552.7714627811108 1103.5283726290215 2 552.7716552615166 MULTI CID FTMS 0 0 0 17774 738029.0625 0.2567318135675159 -3 0.2941131591796875 11 Unmodified _TLWPWLCW_ REV__ENST00000586588.5_1_19:10244216-10244264:-|nuORF 5.760428011301431 0.7893668129297577 3 E 1 -1 8.0989 0.0 0.0 0.73391 0.0 0.0 889.396107469645 82.06696497134999 971.463072440995 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 E 0.73391 - 8 + 1 0.915 20370.8 1.0 12053 5730 17774 HBL1_DMSO_200M_050219_1,17785 HBL1_DMSO_200M_050219_1,17785,TLWPWLCW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17786 85.103 67.0 799370.0 25 0 132370.0 -1 LFLYCIFLS 9 64 588.3140312141247 1174.6135094950494 2 588.3156005740166 MULTI CID FTMS 0 0 0 17774 694160.375 0.2558685504414555 11 -1.0070648193359375 12 Carbamidomethyl (C) _LFLYC(Carbamidomethyl (C))IFLS_ ENST00000513322.5_1_5:115176765-115176948:-|nuORF 16.942295170755138 0.3780752226737986 3 DPP{[QN]|[E{I|L}]|[KN]} 5 -1 26.466 0.0 0.0 2.2532 0.0 0.0 605.3297045492263 0.0 605.3297045492263 0.0 19.47621246364342 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 DPP{[QN]|[E{I|L}]|[KN]} 2.2532 - 29 1 0.915 48971.7 1.0 12054 5730 17774 HBL1_DMSO_200M_050219_1,17786 HBL1_DMSO_200M_050219_1,17786,LFLYCIFLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17787 85.105 86.0 720650.0 25 0 102160.0 + 32608 SAWRVISSI 9 104 509.7883454532379 1017.562137973276 2 509.7875854372978 MULTI CID FTMS 0 0 0 17774 644738.125 0.2381155837470887 2 -0.1063690185546875 13 Unmodified _SAWRVISSI_ ENSG00000134308|ENST00000238081|YWHAQ 65.47368725323818 0.0230515101691092 3 {[SA]|[TG]}WRV{I|L}SS{I|L} 9 0 + 72.814 0.0 0.0 7.1557 7.1557 89.665 0.0 0.0 0.0 8.168011900121599 14.973024840566469 8.168011900121599 8.168011900121599 0 2.0356668758921828 1.3979400086720375 0.805462187404089 0.0 + + {[SA]|[TG]}WRV{I|L}SS{I|L};{[TV]|[{I|L}S]}S{[NV]|[RG]}V{I|L}SS{I|L};{[SA]|[TG]}VV[SG]V{I|L}SS{I|L};{[WT]|[RM]}{[NV]|[RG]}V{I|L}SS{I|L};{[TV]|[{I|L}S]}[VG][SG]V{I|L}SS{I|L};{[SA]|[TG]}VV{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}SS{I|L};{[CA]|SS}{I|L}{[NV]|[RG]}V{I|L}SS{I|L};{[TV]|[{I|L}S]}[VG]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}SS{I|L};{[SA]|[TG]}[QP]{M(Oxidation (M))|F}[R{I|L}]S{I|L};AA[{I|L}T][SG]V{I|L}SS{I|L} 7.1557;6.353;5.8628;5.3075;5.2317;5.2166;5.0116;4.5855;4.5746;4.3277 +;-;-;-;-;-;-;-;-;- + 529 1 0.915 52490.2 1.0 12055 5730 17774 HBL1_DMSO_200M_050219_1,17787 HBL1_DMSO_200M_050219_1,17787,SAWRVISSI True True SAWRVISSI 85.105212 509.787585437298 77193936.0 17774.0 ENSG00000134308|ENST00000238081|YWHAQ 5.769422690073649 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17788 85.107 97.0 1208500.0 25 0 171800.0 + 23262 LSVNLVVVA 9 108 457.28944756824814 912.5643422032964 2 457.2894470095634 MULTI CID FTMS 0 0 0 17774 649118.5 0.0916518436165625 -6 0.5976486206054688 14 Unmodified _LSVNLVVVA_ REV__ENSG00000196811|ENST00000651502|CHRNG;REV__nc|ENSG00000196811|P07510-2|CHRNG 43.85829265575387 0.0542763391141878 3 {[TV]|[{I|L}S]}VN{I|L}V 6 -1 48.492 0.0 0.0 5.3138 0.0 0.0 0.0 284.1615858740242 284.1615858740242 20.60612165723996 0.0 0.0 0.0 0 0.2302046884880938 1.6989700043360187 1.7059771852360797 0.0 {[TV]|[{I|L}S]}VN{I|L}V 5.3138 + + 2006 1 0.915 95448.8 1.0 12056 5730 17774 HBL1_DMSO_200M_050219_1,17788 HBL1_DMSO_200M_050219_1,17788,LSVNLVVVA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17789 85.109 69.0 639100.0 25 0 82564.0 18708 LAKFKSQSL 9 82 511.3061554469917 1020.5977579607834 2 511.8036987185478 MULTI CID FTMS 0 0 0 17774 628370.5 0.8317710695474467 5 -0.38763427734375 15 Unmodified _LAKFKSQSL_ ENSG00000132972|ENST00000255324|RNF17;nc|ENSG00000132972|Q9BXT8-4|RNF17;nc|ENSG00000132972|Q9BXT8-5|RNF17 34.10243960390752 0.1078313939113124 3 [{I|L}A]GHA{I|L}{I|L}Y 8 7 47.718 0.0 0.0 4.6755 0.0 0.0 0.0 179.11531102158338 179.11531102158338 24.50872436502529 0.0 0.0 0.0 0 0.2134679910804404 1.6989700043360187 0.0 0.0 [{I|L}A]GHA{I|L}{I|L}Y 4.6755 - 166 1 0.915 38396.6 1.0 12057 5730 17774 HBL1_DMSO_200M_050219_1,17789 HBL1_DMSO_200M_050219_1,17789,LAKFKSQSL True False HQLALISQL 85.108951 511.803698718548 17864758.0 17774.0 ENSG00000136807|ENST00000373264|CDK9;;nc|ENSG00000136807|P50750-2|CDK9 4.8476951122283936 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17790 85.112 130.0 556220.0 25 0 55095.0 + 22547 LPWPFRNKV 9 82 386.2258333005859 1155.6556705019575 3 386.2257263064384 MULTI CID FTMS 0 0 0 17774 621268.25 0.3731236635133013 7 -0.6358795166015625 16 Unmodified _LPWPFRNKV_ ENSG00000056558|ENST00000373887|TRAF1;nc|ENSG00000056558|Q13077-2|TRAF1 20.41453444215458 0.284085796332423 3 {I|L}PWV 4 5 52.18 0.0 0.0 4.5152 0.0 0.0 0.0 657.3476101379665 657.3476101379665 24.73320034371433 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {I|L}PWV 4.5152 - 107 + 1 0.915 70917.7 1.0 12058 5730 17774 HBL1_DMSO_200M_050219_1,17790 HBL1_DMSO_200M_050219_1,17790,LPWPFRNKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17791 85.113 50.0 706530.0 25 0 92273.0 + 18769 LANDELHL 8 61 462.7439258842263 923.4732988352524 2 462.7440673708916 MULTI CID FTMS 0 0 0 17774 572854.3125 0.3252750387426995 8 -0.6755599975585938 17 Unmodified _LANDELHL_ REV__ENSG00000146242|ENST00000369750|TPBG 12.531546534597751 0.7257836412119636 3 [{I|L}A]P{I|L}{M(Oxidation (M))|F} 5 -1 39.23 0.0 0.0 4.2481 0.0 0.0 0.0 379.1518648736938 379.1518648736938 26.75587224189204 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L}{M(Oxidation (M))|F} 4.2481 - 15 + 1 0.915 34971.7 1.0 12059 5730 17774 HBL1_DMSO_200M_050219_1,17791 HBL1_DMSO_200M_050219_1,17791,LANDELHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17792 85.115 78.0 689050.0 25 0 46631.0 + 44998 YPSLPTMTV 9 89 504.7566657755049 1007.49877861781 2 504.7575866580009 MULTI CID FTMS 0 0 0 17774 566050.625 0.1917976481985043 -1 0.131744384765625 18 Unmodified _YPSLPTMTV_ ENSG00000089289|ENST00000356413|IGBP1 53.57557251787612 0.0325303259649373 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[TP][PA]Y 9 3 + 37.615 0.0 0.0 3.7335 3.7335 69.659 0.0 0.0 0.0 0.6694678963061307 11.367640270735471 0.6694678963061307 0.6694678963061307 0 0.0 1.2218487496163564 1.305462187404089 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[TP][PA]Y;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}[TP][PA]Y;{[TV]|[{I|L}S]}PY[TP][PA]Y;[MT]P{I|L}[TP][VS]Y;[MT]PT[{I|L}P][VS]Y;[PS]Y{I|L}[TP][PA]Y;[MT]P{I|L}[YR]{NN|[MP]|[D{I|L}]|[EV]};{[VA]|[{I|L}G]}{I|L}[WK][DN]Y;[MT]PY[R{I|L}]{NN|[MP]|[D{I|L}]|[EV]};[PS]{I|L}Y[TP][PA]Y 3.7335;3.667;3.1948;2.1656;2.0389;1.7484;1.6973;1.4573;1.3024;1.2762 -;-;-;-;-;-;-;-;-;- 339 1 0.915 45893.4 1.0 12060 5730 17774 HBL1_DMSO_200M_050219_1,17792 HBL1_DMSO_200M_050219_1,17792,YPSLPTMTV True True YPSLPTMTV 85.114695 504.757586658001 83017264.0 17774.0 ENSG00000089289|ENST00000356413|IGBP1 5.63190237681071 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17793 85.116 78.0 1207400.0 25 0 285000.0 + + 40415 RIDGVSLLV 9 107 486.2965868591843 970.5786207851686 2 486.2961608767509 MULTI CID FTMS 0 0 0 17774 448192.1875 0.4727679353429529 -2 0.2302017211914062 19 Unmodified _VIGDRSLIV_ ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENSG00000146223|ENST00000493763|RPL7L1;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 29.081581746732265 0.1611639662936252 3 {NN|[MP]|[D{I|L}]|[EV]}R[VG]S{I|L}{I|L}V 9 -1 + 55.168 0.0 0.0 5.684 5.684 84.055 0.0 0.0 0.0 10.051499783199064 16.478174818886373 10.051499783199064 6.706962271689747 0 0.8807196863200843 1.3010299956639813 0.9247425010840048 0.0 {NN|[MP]|[D{I|L}]|[EV]}R[VG]S{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}R{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}V;{I|L}{I|L}[WQ]S{I|L}{I|L}V;[R{I|L}]D[VG]S{I|L}{I|L}V;[R{I|L}]D{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}V;[{I|L}A]G[W{I|L}]S{I|L}{I|L}V;[Q{I|L}][W{I|L}]S{I|L}{I|L}V;{I|L}{I|L}[K{I|L}]S{[CT]|[{M(Oxidation (M))|F}G]}{[HG]|PP};{[TV]|[{I|L}S]}[K{I|L}]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{[HG]|PP};{I|L}{I|L}[KS]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{[HG]|PP} 5.684;4.993;4.6484;4.3907;3.6996;3.669;3.3895;0.41715;0.1196;0.107 -;-;-;-;-;-;-;-;-;- 170 1 0.915 75285.5 1.0 12061 5730 17774 HBL1_DMSO_200M_050219_1,17793 HBL1_DMSO_200M_050219_1,17793,VIGDRSLIV False False RIDGVSLLV 85.116468 486.296160876751 6509200.5 17774.0 ENST00000397415.7_1_6:42848808-42854199:+|nuORF;;ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 5.156018654505412 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17794 85.118 90.0 642510.0 25 0 61709.0 + 21362 LPFPAQPPVV 10 104 532.8105388036046 1063.606524674009 2 532.8112060427666 MULTI CID FTMS 0 0 0 17774 398216.09375 0.3413196448859192 -5 0.5372238159179688 20 Unmodified _LPFPAQPPVV_ ENSG00000139746|ENST00000438737|RBM26;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26 44.40701690623563 0.1129771813061863 3 PM{I|L}{I|L}N 5 9 28.589 0.0 0.0 2.6879 0.0 0.0 313.19968499274097 179.08327661685783 492.2829616095988 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.4247425010840047 PM{I|L}{I|L}N 2.6879 - 394 + 1 0.915 54363.8 1.0 12062 5730 17774 HBL1_DMSO_200M_050219_1,17794 HBL1_DMSO_200M_050219_1,17794,LPFPAQPPVV True True LPFPAQPPVV 85.11847 532.811206042767 19845006.0 17774.0 nc|ENSG00000139746|Q5T8P6-3|RBM26;;ENSG00000139746|ENST00000438737|RBM26;;nc|ENSG00000139746|Q5T8P6-2|RBM26 4.763962745666504 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17796 85.123 34.0 2332500.0 25 0 228610.0 -1 VRHCAEPL 8 102 491.25015776628527 980.4857625993706 2 491.2505065798759 MULTI CID FTMS 0 0 0 17795 1598617.0 0.8644332827067192 3 -0.3142013549804687 1 Carbamidomethyl (C) _VRHC(Carbamidomethyl (C))AEPL_ ENST00000520006.1_1_5:151152047-151166145:+|nuORF 13.50788311687929 0.7113601687236069 3 V{M(Oxidation (M))|F}[KQ]{M(Oxidation (M))|F}CP{I|L} 8 -1 + 32.115 0.0 0.0 3.2755 3.2755 78.255 0.0 0.0 0.0 10.43305028184122 3.7438870639825694 3.7438870639825694 8.682218388613947 0 0.0 0.0 0.0 0.0 V{M(Oxidation (M))|F}[KQ]{M(Oxidation (M))|F}CP{I|L};[EP]V{I|L}[RH]{[QC]|[C(Carbamidomethyl (C))A]};[TP]V[QP][DP]EV;[QP][VP]T[DP]EV;[VP]E{I|L}[RH]{[QC]|[C(Carbamidomethyl (C))A]};[VP][QP]T[DP]EV;[PA]G[VP]T[DP]EV 3.2755;2.39;1.1363;0.68181;0.3196;0.19519;0.043821 -;-;-;-;-;-;- 251 + 1 0.917 62252.4 1.0 12063 5731 17795 HBL1_DMSO_200M_050219_1,17796 HBL1_DMSO_200M_050219_1,17796,VRHCAEPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17797 85.124 56.0 1205300.0 25 0 327950.0 + 23509 LTKKENIRL 9 64 557.8503559949683 1113.6861590567364 2 557.8511230349541 MULTI CID FTMS 0 0 0 17795 1148466.0 0.0281994022188147 10 -0.9738388061523438 2 Unmodified _LTKKENIRL_ REV__ENSG00000162669|ENST00000370425|HFM1;REV__ENST00000462405.5_1_1:91728075-91813019:-|nuORF;REV__nc|ENSG00000162669|A2PYH4-2|HFM1 18.1463463914782 0.3454829746528889 3 [VG]T 3 -1 17.14 0.0 0.0 1.539 0.0 0.0 0.0 853.5129488580686 853.5129488580686 4.921525057367408 0.0 0.0 0.0 0 0.1989700043360188 1.0969100130080565 0.0 0.0 [VG]T 1.539 - 17 + 1 0.917 58643.9 1.0 12064 5731 17795 HBL1_DMSO_200M_050219_1,17797 HBL1_DMSO_200M_050219_1,17797,LTKKENIRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17798 85.125 45.0 400010.0 25 0 67200.0 + -1 GVPVLKMVLRP 11 36 612.8800297509572 1223.7455065687143 2 612.8800536990166 MULTI CID FTMS 0 0 0 17795 1601589.875 1.0 0 0.0 3 Oxidation (M) _GVPVLKM(Oxidation (M))VLRP_ REV__ENSG00000198743|ENST00000381151|SLC5A3 0.3506318815782774 0.8734936314171269 3 {I|L} 1 -1 5.4846 0.0 0.0 0.44818 0.0 0.0 611.4142210235956 496.2220553033813 1107.636276326977 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.44818 + + 1 + 1 0.917 21706.8 1.0 12065 5731 17795 HBL1_DMSO_200M_050219_1,17798 HBL1_DMSO_200M_050219_1,17798,GVPVLKMVLRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17799 85.13 239.0 422540.0 25 0 61247.0 -1 0 114 621.3931545724366 620.3858781058366 1 621.3932983279228 MULTI CID FTMS 0 0 0 17795 1053930.625 1.0 0 0.0 4 3 [PS]{M(Oxidation (M))|F}AS 5 -1 26.61 0.0 0.0 4.2893 0.0 0.0 0.0 128.13985084437095 128.13985084437095 16.52155767668038 0.0 0.0 0.0 0 0.0 0.4202164033831898 0.9731975075880328 0.0 [PS]{M(Oxidation (M))|F}AS 4.2893 - 117 1 0.917 80242.3 1.0 12066 5731 17795 HBL1_DMSO_200M_050219_1,17799 HBL1_DMSO_200M_050219_1,17799, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17800 85.131 70.0 1630200.0 25 0 340790.0 -1 ALLETYCA 8 80 314.15321840409246 939.4378258124774 3 314.1530639529228 MULTI CID FTMS 0 0 0 17795 1006937.6875 0.2633868882758509 9 -0.8982925415039062 5 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 26.88365393820708 0.4786498634179528 3 A{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}KM 7 -1 52.813 0.0 0.0 5.6218 0.0 0.0 0.0 163.05158411197502 163.05158411197502 36.66992713939968 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 A{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}KM 5.6218 - 77 + 1 0.917 96032.8 1.0 12067 5731 17795 HBL1_DMSO_200M_050219_1,17800 HBL1_DMSO_200M_050219_1,17800,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17801 85.137 300.0 186300.0 25 0 35187.0 + 39655 VEAVNLII 8 87 435.76819590146073 869.5218388697215 2 435.7682983279228 MULTI CID FTMS 0 0 0 17795 890942.125 1.0 0 0.0 6 Unmodified _VEAVNLII_ REV__ENSG00000169562|ENST00000361726|GJB1 18.13498045792455 0.6430038125133779 3 DK{I|L}R{I|L}{I|L} 6 -1 20.099 0.0 0.0 2.3115 0.0 0.0 113.0354672841972 0.0 113.0354672841972 0.0 9.261357290502898 0.0 0.0 0 0.0 0.0 0.0 0.0 DK{I|L}R{I|L}{I|L} 2.3115 - 51 + 1 0.917 50751.2 1.0 12068 5731 17795 HBL1_DMSO_200M_050219_1,17801 HBL1_DMSO_200M_050219_1,17801,VEAVNLII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17802 85.139 65.0 704340.0 25 0 84978.0 + 9873 FPFKPPSI 8 61 466.7657004369864 931.5168479407728 2 466.7648193240166 MULTI CID FTMS 0 0 0 17795 835015.75 0.2054327953740359 6 -0.6026535034179688 7 Unmodified _FPFKPPSI_ ENSG00000160087|ENST00000349431|UBE2J2;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2 25.399314129420983 0.5099049743284904 3 {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KP[PS]{I|L} 8 0 + 42.841 0.0 0.0 4.5991 4.5991 76.657 0.0 0.0 0.0 29.742143968049888 3.0204688488093723 3.0204688488093723 3.357921019231931 0 0.4247425010840047 0.0 0.0 0.0 + + {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KP[PS]{I|L};{M(Oxidation (M))|F}P{M(Oxidation (M))|F}KP[TP]V 4.5991;4.2386 +;- + 43 + 1 0.917 42317.3 1.0 12069 5731 17795 HBL1_DMSO_200M_050219_1,17802 HBL1_DMSO_200M_050219_1,17802,FPFKPPSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17803 85.141 96.0 706680.0 25 0 100300.0 -1 TVQCFWGV 8 93 498.7329324742228 995.4513120152455 2 498.7325622439384 MULTI CID FTMS 0 0 0 17795 789860.5 1.0 0 0.0 8 Carbamidomethyl (C) _TVQC(Carbamidomethyl (C))FWGV_ ENST00000609898.1_1_10:45454386-45454641:-|nuORF 10.183394434864962 0.7604730176254005 3 {[VA]|[{I|L}G]}[YC(Carbamidomethyl (C))]{[QG]|[NA]}VTV 9 -1 {[VA]|[{I|L}G]}[YC(Carbamidomethyl (C))]{[QG]|[NA]}V + + 19.253 0.44749 0.057569 1.934 1.934 48.768 0.0 0.0 0.0 0.0 7.034021960761265 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {[VA]|[{I|L}G]}[YC(Carbamidomethyl (C))]{[QG]|[NA]}VTV 1.934 - 203 + 1 0.917 59964.9 1.0 12070 5731 17795 HBL1_DMSO_200M_050219_1,17803 HBL1_DMSO_200M_050219_1,17803,TVQCFWGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17804 85.146 320.0 817960.0 25 0 64776.0 + 9649 FLPDAQCYPC 10 186 578.7451015026397 1155.4756500720794 2 578.7457763552666 MULTI CID FTMS 0 0 0 17795 673922.0625 0.4389577829612412 -2 0.1649703979492187 9 Unmodified _FLPDAQCYPC_ REV__ENST00000267116.7_1_12:56636474-56636675:-|nuORF 13.042465956692816 0.6287021003332052 3 NVVDP{[QN]|[E{I|L}]|[KN]} 7 -1 35.992 0.0 0.0 3.1149 0.0 0.0 371.0644564585091 0.0 371.0644564585091 0.0 0.6916792857617722 0.0 0.0 0 0.3807196863200844 0.0 0.0 1.0994850021680094 NVVDP{[QN]|[E{I|L}]|[KN]} 3.1149 - 1410 1 0.917 196283.6 1.0 12071 5731 17795 HBL1_DMSO_200M_050219_1,17804 HBL1_DMSO_200M_050219_1,17804,FLPDAQCYPC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17805 85.148 44.0 979580.0 25 0 67807.0 + 16862 KIFDEILVNA 10 81 581.329401324827 1160.644249716454 2 581.3301269412041 MULTI CID FTMS 0 0 0 17795 635484.25 0.0420883721416948 -3 0.263427734375 10 Unmodified _KIFDEILVNA_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant 33.4449034751529 0.2267874087365337 3 {[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}{I|L}K{I|L}V{[QG]|[NA]} 10 4 + 54.046 0.0 0.0 4.6566 4.6566 76.2 0.0 0.0 0.0 4.884381005764311 43.16305479571239 4.884381005764311 3.0102999566398125 0 0.8807196863200843 0.0 0.7614393726401688 0.0 {[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}{I|L}K{I|L}V{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}K{I|L}{I|L}V{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}{I|L}K{I|L}V{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}K{I|L}{I|L}V{[QG]|[NA]};[YV][Q{I|L}]E{I|L}{I|L}V{[QG]|[NA]};[Q{I|L}][YV]E{I|L}{I|L}V{[QG]|[NA]};[YQ][{I|L}V]E{I|L}{I|L}V{[QG]|[NA]};{[QV]|[N{I|L}]|[RA]|[KV]}[Y{I|L}]E{I|L}{I|L}V{[QG]|[NA]};[SG]{M(Oxidation (M))|F}[{I|L}V]E{I|L}{I|L}V{[QG]|[NA]};[YQ]A[RN]{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]} 4.6566;4.3972;4.1378;3.8785;3.531;3.3004;3.1487;2.6982;2.6337;1.9101 -;-;-;-;-;-;-;-;-;- 388 1 0.917 38455.8 1.0 12072 5731 17795 HBL1_DMSO_200M_050219_1,17805 HBL1_DMSO_200M_050219_1,17805,KIFDEILVNA False True KIFDEILVNA 85.147688 581.330126941204 401718792.0 17795.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant;;ENSG00000077097|ENST00000264331|TOP2B;;nc|ENSG00000131747|P11388-2|TOP2A 4.627584457397461 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17806 85.151 150.0 878510.0 25 0 116510.0 + 1419 ALDMWSGRSL 10 116 379.1914642674618 1134.5525634025855 3 379.1914855837822 MULTI CID FTMS 0 0 0 17795 608011.25 0.9101659955626488 -1 0.0332260131835937 11 Unmodified _ALDMWSGRSL_ REV__ENST00000367091.7_1_1:207095210-207095324:-|nuORF;REV__ENST00000525793.5_2_1:207095210-207096519:-|nuORF 20.453626601364224 0.5043500229302764 3 {[DA]|[EG]}{I|L} 3 -1 30.942 0.0 0.0 2.7273 0.0 0.0 0.0 832.3803886801824 832.3803886801824 6.640209150236345 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[DA]|[EG]}{I|L} 2.7273 - 302 1 0.917 109960.2 1.0 12073 5731 17795 HBL1_DMSO_200M_050219_1,17806 HBL1_DMSO_200M_050219_1,17806,ALDMWSGRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17807 85.152 76.0 338520.0 25 0 70653.0 27182 PGFLFKKLFK 10 41 408.9221794976488 1223.7447090931464 3 408.9221069216728 MULTI CID FTMS 0 0 0 17795 583608.375 1.0 0 0.0 12 Unmodified _PGFLFKKLFK_ ENSG00000225830|ENST00000355832|ERCC6 0.1593219195374162 0.7258995344399193 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 0.917 27975.8 1.0 12074 5731 17795 HBL1_DMSO_200M_050219_1,17807 HBL1_DMSO_200M_050219_1,17807,PGFLFKKLFK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17808 85.154 51.0 1135700.0 25 0 125960.0 + -1 LASMEEML 8 82 478.2091679885692 954.4037830439383 2 478.2086364626884 MULTI CID FTMS 0 0 0 17795 587009.9375 0.2827121156826834 45 -4.484092712402344 13 2 Oxidation (M) _LASM(Oxidation (M))EEM(Oxidation (M))L_ REV__ENSG00000154380|ENST00000366843|ENAH;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH 6.354104778181461 0.7857632046190106 3 [VG]V 3 -1 22.676 0.0 0.0 2.3759 0.0 0.0 0.0 696.2220528162921 696.2220528162921 7.014224667125715 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VG]V 2.3759 - 88 1 0.917 51905.9 1.0 12075 5731 17795 HBL1_DMSO_200M_050219_1,17808 HBL1_DMSO_200M_050219_1,17808,LASMEEML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17809 85.155 48.0 1408400.0 25 0 129530.0 22001 LPPPPMQYI 9 105 528.2826865253334 1054.5508201174666 2 528.2832519412041 MULTI CID FTMS 0 0 0 17795 506953.375 0.7844342405316694 3 -0.3142013549804687 14 Unmodified _LPPPPMQYI_ ENSG00000155868|ENST00000286317|MED7 19.438996006549623 0.310492472477042 3 A{I|L}DK{I|L}[R{I|L}]{I|L} 8 8 33.365 0.0 0.0 3.1639 0.0 0.0 113.94612127236572 0.0 113.94612127236572 0.0 19.69273760456403 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}DK{I|L}[R{I|L}]{I|L} 3.1639 - 190 + 1 0.917 56712.9 1.0 12076 5731 17795 HBL1_DMSO_200M_050219_1,17809 HBL1_DMSO_200M_050219_1,17809,LPPPPMQYI False True KVAELVHFL 85.155038 528.283251941204 5508902.0 17795.0 ENSG00000267978|ENST00000595065|MAGEA9B;;chrX:149583633-149587362|19|23.84|0.03|9.58|-|ENST00000593349|MAGEA9B,MAGEA9B;;ENSG00000123584|ENST00000243314|MAGEA9;;ENSG00000221867|ENST00000370278|MAGEA3 2.808468441168467 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17810 85.158 140.0 246470.0 25 0 33035.0 -1 0 70 600.0001290232798 1796.9785576700392 3 600.3354980349541 MULTI CID FTMS 0 0 0 17795 547429.0 1.0 0 0.0 15 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{M(Oxidation (M))|F}SDG{I|L}A[H{I|L}]DN{I|L}K 16 -1 + 59.797 0.0 0.0 3.3276 3.3276 73.097 0.0 0.0 0.0 7.659167939666318 3.2838616227078177 3.2838616227078177 3.2838616227078177 0 0.3182503180159344 0.0 0.0 0.2614393726401688 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{M(Oxidation (M))|F}SDG{I|L}A[H{I|L}]DN{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{M(Oxidation (M))|F}SDG{I|L}A[H{I|L}]DNK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{M(Oxidation (M))|F}SN{[QN]|[E{I|L}]|[KN]}[H{I|L}]DN{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{M(Oxidation (M))|F}S{[RE]|[WV]}A[H{I|L}]DN{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{M(Oxidation (M))|F}SD[Q{I|L}][H{I|L}]DN{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{M(Oxidation (M))|F}SN{[QN]|[E{I|L}]|[KN]}[H{I|L}]DNK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{M(Oxidation (M))|F}S{[RE]|[WV]}A[H{I|L}]DNK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{M(Oxidation (M))|F}SD[Q{I|L}][H{I|L}]DNK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{M(Oxidation (M))|F}WWA[H{I|L}]DN{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{M(Oxidation (M))|F}WWA[H{I|L}]DNK{I|L} 3.3276;3.1449;2.9447;2.9447;2.7771;2.7619;2.7619;2.5944;2.5724;2.3896 -;-;-;-;-;-;-;-;-;- 305 + 1 0.917 31678.7 1.0 12077 5731 17795 HBL1_DMSO_200M_050219_1,17810 HBL1_DMSO_200M_050219_1,17810, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17811 85.165 384.0 312010.0 25 0 28063.0 40539 VIYCSEEQSL 10 157 585.7711381948089 1169.5277234564178 2 585.7723876833916 MULTI CID FTMS 0 0 0 17795 498698.28125 0.5143421255852054 3 -0.3142013549804687 16 Unmodified _VIYCSEEQSL_ ENST00000355135.6_2_X:13835118-13835178:-|nuORF 24.020572477871973 0.4289996903560794 3 [{I|L}V]{M(Oxidation (M))|F}MN 5 8 44.476 0.0 0.0 3.8029 0.0 0.0 0.0 562.2328778575057 562.2328778575057 22.63242526149965 0.0 0.0 0.0 0 0.5 2.0 0.0 0.4247425010840047 [{I|L}V]{M(Oxidation (M))|F}MN 3.8029 - 677 1 0.917 93155.1 1.0 12078 5731 17795 HBL1_DMSO_200M_050219_1,17811 HBL1_DMSO_200M_050219_1,17811,VIYCSEEQSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17812 85.167 122.0 745760.0 25 0 126340.0 + -1 VEGPMLLIL 9 131 500.7899219477793 0 500.7872802615166 PEAK CID FTMS 0 0 0 17795 481259.59375 0.7673974503379172 -1 0.0332260131835937 17 Oxidation (M) _VEGPM(Oxidation (M))LLIL_ REV__ENST00000452532.1_1_X:55934878-55934956:+|nuORF 23.1484247019978 0.1725298825155634 3 D 1 -1 10.089 0.0 0.0 1.0093 0.0 0.0 285.13781401098987 596.3797701471311 881.517584158121 0.0 0.0 0.0 0.0 0 0.6109243748081782 0.0 0.0 0.0 D 1.0093 - 329 + 1 0.917 76049.9 1.0 12079 5731 17795 HBL1_DMSO_200M_050219_1,17812 HBL1_DMSO_200M_050219_1,17812,VEGPMLLIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17813 85.175 431.0 391610.0 25 0 24387.0 + 33302 SFSEFTSSL 9 119 1004.4561353266296 1003.4488588600294 1 1004.45665282011 MULTI CID FTMS 0 0 0 17795 353477.28125 0.2135758413280256 4 -0.3544082641601562 18 Unmodified _SFSEFTSSL_ ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3 128.3654064809346 0.0055442937744054 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ES{M(Oxidation (M))|F}TSS{I|L} 9 2 + 72.308 0.0 0.0 7.2059 7.2059 85.702 0.0 0.0 0.0 3.935078169319297 13.300756084811807 3.935078169319297 3.935078169319297 0 1.0356668758921828 1.0 2.642159058960253 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ES{M(Oxidation (M))|F}TSS{I|L};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}S{M(Oxidation (M))|F}TSS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EST{M(Oxidation (M))|F}SS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SE{M(Oxidation (M))|F}TSS{I|L};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}ST{M(Oxidation (M))|F}SS{I|L};[{M(Oxidation (M))|F}T]DS{M(Oxidation (M))|F}TSS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ESTS{M(Oxidation (M))|F}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ETS{M(Oxidation (M))|F}SS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{M(Oxidation (M))|F}STSS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SET{M(Oxidation (M))|F}SS{I|L} 7.2059;6.8138;6.4598;6.2507;6.0676;6.0335;5.7404;5.6615;5.5904;5.5045 -;-;-;+;-;-;-;-;-;- + 4921 1 0.917 111194.4 1.0 12080 5731 17795 HBL1_DMSO_200M_050219_1,17813 HBL1_DMSO_200M_050219_1,17813,SFSEFTSSL True True SFSEFTSSL 85.174995 1004.45665282011 15409625.0 17795.0 nc|ENSG00000110075|Q5H9R7-6|PPP6R3;;ENSG00000110075|ENST00000393800|PPP6R3;;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;;nc|ENSG00000110075|Q5H9R7-3|PPP6R3;;nc|ENSG00000110075|Q5H9R7-5|PPP6R3 6.63355286916097 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17814 85.179 189.0 439440.0 25 0 43938.0 39666 VEEDEPTDL 9 119 523.7310747514833 0 523.7311279177666 PEAK CID FTMS 0 0 0 17795 321028.0625 0.8003683304671297 -4 0.3273391723632812 19 Unmodified _VEEDEPTDL_ ENSG00000124783|ENST00000244763|SSR1;ENST00000483409.1_1_6:7303794-7313353:-|nuORF;nc|ENSG00000124783|P43307-2|SSR1 11.640296217721598 0.2934555500198502 3 T 1 8 12.408 0.0 0.0 1.1869 0.0 0.0 99.06773097901836 842.3086604713665 941.3763914503847 0.0 0.0 0.0 0.0 0 0.1923877696554315 0.0 0.3494850021680094 0.0 + T 1.1869 + + 87 + 1 0.917 69852.6 1.0 12081 5731 17795 HBL1_DMSO_200M_050219_1,17814 HBL1_DMSO_200M_050219_1,17814,VEEDEPTDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17815 85.192 679.0 187110.0 25 0 17577.0 + 42224 VSIVIDKNLKL 11 157 414.5978799883468 0 414.5978271365166 PEAK CID FTMS 0 0 0 17795 268090.96875 1.0 0 0.0 20 Unmodified _VSIVIDKNLKL_ REV__ENSG00000196419|ENST00000360079|XRCC6;REV__ENST00000435236.2_1_X:98974480-98975440:-|nuORF;REV__nc|ENSG00000196419|P12956-2|XRCC6 5.731851221503515 0.47618401536486 3 V 1 -1 4.6041 0.0 0.0 0.5566 0.0 0.0 314.91890169239986 410.1791475885376 725.0980492809374 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.5566 + + 44 + 1 0.917 103678.2 1.0 12082 5731 17795 HBL1_DMSO_200M_050219_1,17815 HBL1_DMSO_200M_050219_1,17815,VSIVIDKNLKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17817 85.199 303.0 597580.0 25 0 42986.0 27086 PFACKSAL 8 128 418.71879975382 0 418.7187988162041 PEAK CID FTMS 0 0 0 17816 456523.5 0.530661563743674 1 -0.1564178466796875 1 Unmodified _PFACKSAL_ ENSG00000256463|ENST00000537592|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3 11.114462752807354 0.5290325060821968 3 NWK 3 7 13.452 0.0 0.0 1.6102 0.0 0.0 276.1090377599763 128.07221399478752 404.1812517547638 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5994850021680094 NWK 1.6102 - 136 + 1 0.917 143848.8 1.0 12083 5732 17816 HBL1_DMSO_200M_050219_1,17817 HBL1_DMSO_200M_050219_1,17817,PFACKSAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17818 85.205 305.0 496670.0 25 0 72270.0 -1 0 122 657.3445568666086 1969.0118412000256 3 657.6793701052666 MULTI CID FTMS 0 0 0 17816 720384.625 1.0 0 0.0 2 3 [{I|L}T][NP]N{I|L}{I|L}GAAG 11 -1 54.736 0.0 0.0 2.7799 0.0 0.0 0.0 944.4341881215744 944.4341881215744 18.093185481980605 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [{I|L}T][NP]N{I|L}{I|L}GAAG 2.7799 - 1279 + 1 0.917 116492.6 1.0 12084 5732 17816 HBL1_DMSO_200M_050219_1,17818 HBL1_DMSO_200M_050219_1,17818, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17819 85.208 149.0 619660.0 25 0 103900.0 + 11464 GIGHWVVAV 9 103 469.2681621052244 936.5217712772488 2 469.2688476443291 MULTI CID FTMS 0 0 0 17816 525984.75 0.5585457319922184 -1 0.0731430053710937 3 Unmodified _GIGHWVVAV_ ENST00000269919.10_1_19:18480032-18480299:+|nuORF 28.17323086031832 0.1727213568982648 3 {[TV]|[{I|L}S]}V 3 7 22.294 0.0 0.0 2.3805 0.0 0.0 0.0 634.3137689181269 634.3137689181269 -0.5546218740408904 0.0 -0.5546218740408904 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}V 2.3805 - 286 1 0.917 77293.2 1.0 12085 5732 17816 HBL1_DMSO_200M_050219_1,17819 HBL1_DMSO_200M_050219_1,17819,GIGHWVVAV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17820 85.209 60.0 1078500.0 25 0 119510.0 + 31793 RSRERISL 8 110 508.8001024603318 1015.5856519874636 2 509.3025085330009 MULTI CID FTMS 0 0 0 17816 473762.4375 0.7813358203486047 -1 0.0731430053710937 4 Unmodified _RSRERISL_ REV__ENST00000561081.5_1_15:71185020-71185149:+|nuORF 11.640296217721598 0.738950129755968 3 {[QV]|[N{I|L}]|[RA]|[KV]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}V{I|L}SVV 9 -1 + 26.699 0.0 0.0 2.6289 2.6289 71.938 0.0 0.0 0.0 1.2491657985699725 9.208187539523747 1.2491657985699725 3.38818556553381 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}V{I|L}SVV;{[SA]|[TG]}[QP]{M(Oxidation (M))|F}{I|L}RVV;{[SA]|[TG]}[WR]V{I|L}SVV;{[SA]|[TG]}G[PA]{M(Oxidation (M))|F}{I|L}RVV;{[{M(Oxidation (M))|F}H]|[RQ]}[{M(Oxidation (M))|F}V]{I|L}RVV;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))K]{I|L}RVV;{[QS]|[NT]}[PA]{M(Oxidation (M))|F}{I|L}RVV;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[{M(Oxidation (M))|F}V]RVV;{[QN]|[E{I|L}]|[KN]}[RK]WSVV;{[QV]|[N{I|L}]|[RA]|[KV]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[W{I|L}]VV 2.6289;2.2953;1.7025;1.6794;1.64;1.3289;1.0187;0.95174;0.85907;0.7376 -;-;-;-;-;-;-;-;-;- 328 1 0.917 55974.3 1.0 12086 5732 17816 HBL1_DMSO_200M_050219_1,17820 HBL1_DMSO_200M_050219_1,17820,RSRERISL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17821 85.211 92.0 636600.0 25 0 88476.0 + 14670 IIQEFLSKV 9 104 538.8215418065546 1075.628530679909 2 538.8219482302666 MULTI CID FTMS 0 0 0 17816 394503.3125 1.0 0 0.0 5 Unmodified _IIQEFLSKV_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 41.34703777101937 0.0680619498902798 3 {I|L}{I|L}QE{M(Oxidation (M))|F}{I|L}SKV 9 0 + 85.955 0.0 0.0 7.9912 7.9912 93.143 0.0 0.0 0.0 69.75750137829837 14.037854146535937 14.037854146535937 9.208187539523747 0 1.024227503252014 2.0 0.7302046884880937 0.4247425010840047 + + {I|L}{I|L}QE{M(Oxidation (M))|F}{I|L}SKV;{I|L}{I|L}[AG]E{M(Oxidation (M))|F}{I|L}SKV;VVRE{M(Oxidation (M))|F}{I|L}SKV;VV[VG]E{M(Oxidation (M))|F}{I|L}SKV;{I|L}[{M(Oxidation (M))|F}V][RD]{I|L}SKV;VVK[{M(Oxidation (M))|F}V][NG]SKV 7.9912;7.1351;2.9674;2.1113;1.7839;0.22931 +;-;-;-;-;- + 396 + 1 0.917 49499.5 1.0 12087 5732 17816 HBL1_DMSO_200M_050219_1,17821 HBL1_DMSO_200M_050219_1,17821,IIQEFLSKV True True IIQEFLSKV 85.211161 538.821948230267 3447753.5 17816.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2;;chr2:47480871-47482783|15|10.27|0.3|5.09|+|2|MSH2,None|1 5.020921230316162 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17822 85.219 417.0 505620.0 25 0 45065.0 + 15635 IQIETGAKVFL 11 157 609.8579996164035 1217.701446299607 2 609.8589965701103 MULTI CID FTMS 0 0 0 17816 363547.8125 1.0 0 0.0 6 Unmodified _IQIETGAKVFL_ ENSG00000132680|ENST00000368321|KHDC4;ENST00000478002.5_1_1:155885750-155895538:-|nuORF;nc|ENSG00000132680|Q7Z7F0-2|KHDC4;nc|ENSG00000132680|Q7Z7F0-3|KHDC4 75.5705956163825 0.0162609445057862 3 [Q{I|L}]ETKV{M(Oxidation (M))|F}{I|L}Q{I|L} 10 5 + 64.962 0.0 0.0 5.3348 5.3348 80.446 0.0 0.0 0.0 10.249569475203243 14.392477357749378 10.249569475203243 4.362591709212182 0 0.4247425010840047 1.2218487496163564 0.9291746928241124 0.6421590589602533 [Q{I|L}]ETKV{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}]ETKV[Q{I|L}]{M(Oxidation (M))|F}{I|L};[Q{I|L}]E[KS]{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}]ETKV{M(Oxidation (M))|F}{I|L}[AG]{I|L};[Q{I|L}]E[KS]{I|L}[Q{I|L}]{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}[RD]KV{M(Oxidation (M))|F}{I|L}Q{I|L};{[TV]|[{I|L}S]}A{[QS]|[NT]}V{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};{[TV]|[{I|L}S]}A{[CP]|[EA]}KV{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}]E[KS]{I|L}{M(Oxidation (M))|F}{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}QTKV{M(Oxidation (M))|F}{I|L}Q{I|L} 5.3348;4.9766;4.7781;4.5822;4.4199;4.2035;4.0914;4.0495;4.0255;3.9972 -;-;-;-;-;-;-;-;-;- 11183 1 0.917 155418.5 1.0 12088 5732 17816 HBL1_DMSO_200M_050219_1,17822 HBL1_DMSO_200M_050219_1,17822,IQIETGAKVFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17823 85.221 99.0 385340.0 25 0 32989.0 + 24183 LYYNTITNF 9 80 574.7854778366103 1147.5564027400203 2 574.7837402224541 MULTI CID FTMS 0 0 0 17816 363062.59375 1.0 0 0.0 7 Unmodified _LYYNTITNF_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 13.50788311687929 0.4710407108020397 3 {[TV]|[{I|L}S]}C(Carbamidomethyl (C)){I|L}Y 5 7 16.652 0.0 0.0 1.4511 0.0 0.0 0.0 508.24094798832056 508.24094798832056 0.6662532807530752 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[TV]|[{I|L}S]}C(Carbamidomethyl (C)){I|L}Y 1.4511 - 161 1 0.917 35392.0 1.0 12089 5732 17816 HBL1_DMSO_200M_050219_1,17823 HBL1_DMSO_200M_050219_1,17823,LYYNTITNF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17824 85.224 172.0 141670.0 25 0 17226.0 45154 YQEQLYRV 8 53 549.7817328041924 1097.5489126751847 2 549.7820922732353 MULTI CID FTMS 0 0 0 17816 294352.75 0.2509932034856051 -1 0.0731430053710937 8 Unmodified _YQEQLYRV_ ENST00000567330.1_1_16:75743035-75743521:-|nuORF 5.760428011301431 0.7893668129297577 3 V 1 7 11.783 0.0 0.0 1.0736 0.0 0.0 980.4692827086792 0.0 980.4692827086792 0.0 0.3627533357430579 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.0736 + + 22 + 1 0.917 27316.7 1.0 12090 5732 17816 HBL1_DMSO_200M_050219_1,17824 HBL1_DMSO_200M_050219_1,17824,YQEQLYRV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17825 85.235 605.0 262540.0 25 0 52941.0 + 16193 IVIDELEEMVT 11 67 430.88824457631785 0 430.8878967165947 PEAK CID FTMS 0 0 0 17816 276270.1875 0.5725286750174191 57 -5.829704284667969 9 Unmodified _IVIDELEEMVT_ REV__ENSG00000113272|ENST00000231198|THG1L 6.2057823575117 0.47618401536486 3 P 1 -1 5.4846 0.0 0.0 0.63791 0.0 0.0 225.4780139555669 534.2099093072874 759.6879232628544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.63791 - 16 + 1 0.917 134567.9 1.0 12091 5732 17816 HBL1_DMSO_200M_050219_1,17825 HBL1_DMSO_200M_050219_1,17825,IVIDELEEMVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17826 85.247 732.0 454820.0 25 0 33926.0 + 18864 LASQHEEL 8 284 309.490381674979 925.449315625137 3 309.4900695681572 MULTI CID FTMS 0 0 0 17816 219671.796875 0.4322986655652819 15 -1.4961395263671875 10 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 3 {I|L}{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 1.7779 0.0 0.0 647.3027982559075 0.0 647.3027982559075 0.0 2.95880017344075 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.7779 - 416 1 0.917 262396.1 1.0 12092 5732 17816 HBL1_DMSO_200M_050219_1,17826 HBL1_DMSO_200M_050219_1,17826,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17827 85.257 550.0 124480.0 25 0 14050.0 + -1 YFYDPDVGNFHY 12 90 768.8242675662041 0 768.8242675662041 PEAK CID FTMS 0 0 0 -1 0 11 Carbamidomethyl (C) _YFYTFYHHC(Carbamidomethyl (C))QA_ ENST00000492506.1_1_5:141016042-141016357:-|nuORF;ENST00000495485.1_1_5:141009604-141016357:-|nuORF;ENSG00000171720|ENST00000305264|HDAC3 12.240655878213236 0.4295705806160874 3 YDPDV[NP]{M(Oxidation (M))|F} 8 -1 43.325 0.0 0.0 2.8213 0.0 0.0 310.13125598551466 275.0672701471313 585.198526132646 0.0 0.0 0.0 0.0 0 1.0941876774005248 0.0 0.4247425010840047 0.0 YDPDV[NP]{M(Oxidation (M))|F} 2.8213 - 195 + 1 0.917 54758.7 1.0 12093 5732 17816 HBL1_DMSO_200M_050219_1,17827 HBL1_DMSO_200M_050219_1,17827,YFYTFYHHCQA False False YFYDPDVGNFHY 85.257084 768.824267566204 2939116.0 17816.0 ENST00000492506.1_1_5:141016042-141016357:-|nuORF;;ENST00000495485.1_1_5:141009604-141016357:-|nuORF;;ENSG00000171720|ENST00000305264|HDAC3 8.84203020731608 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17828 85.266 521.0 333160.0 25 0 15687.0 + 30667 RFPEELTQTF 10 178 634.3192064214766 1266.623859909753 2 634.8212768435478 MULTI CID FTMS 0 0 0 17816 206866.34375 0.3496596169450662 18 -1.79443359375 12 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 53.40400417844725 0.0601721406801337 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VADE{I|L}TQT{M(Oxidation (M))|F} 11 4 + 75.848 0.0 0.0 5.9882 5.9882 83.664 0.0 0.0 0.0 0.9853207288079632 46.85835096164661 0.9853207288079632 5.211115740647841 0 0.8807196863200843 0.5686362358410126 0.7134679910804405 0.6989700043360187 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VADE{I|L}TQT{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VWE{I|L}TQT{M(Oxidation (M))|F};[VP]{M(Oxidation (M))|F}WE{I|L}TQT{M(Oxidation (M))|F};[AG][KS]WE{I|L}TQT{M(Oxidation (M))|F};{[ET]|[MV]}{I|L}ADE{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VGEE{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VADE{I|L}TTQ{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{[VA]|[{I|L}G]}E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VADT{I|L}EQT{M(Oxidation (M))|F} 5.9882;5.5768;5.469;5.2779;5.1981;5.1969;5.166;5.1393;4.9832;4.9707 -;-;-;-;-;-;-;-;-;- 12793 1 0.917 133266.2 1.0 12094 5732 17816 HBL1_DMSO_200M_050219_1,17828 HBL1_DMSO_200M_050219_1,17828,RFPEELTQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17829 85.27 77.0 414140.0 25 0 35999.0 28576 PTSTAFPYQL 10 59 562.7848373631657 1123.555121793131 2 563.2868530154228 MULTI CID FTMS 0 0 0 17816 199006.0 0.6827059856865486 -1 0.0731430053710937 13 Unmodified _PTSTAFPYQL_ nc|ENSG00000155975|Q8NEZ2-3|VPS37A 10.823927491677226 0.6659270209832991 3 [EP]YS{M(Oxidation (M))|F} 5 8 25.361 0.0 0.0 2.2572 0.0 0.0 0.0 497.2696963383064 497.2696963383064 1.7161383772921823 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [EP]YS{M(Oxidation (M))|F} 2.2572 - 62 1 0.917 32202.5 1.0 12095 5732 17816 HBL1_DMSO_200M_050219_1,17829 HBL1_DMSO_200M_050219_1,17829,PTSTAFPYQL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17830 85.279 566.0 205840.0 25 0 10653.0 33913 SLGAAPKL 8 109 756.4612929963064 755.4540165297063 1 758.7252075076103 MULTI CID FTMS 0 0 0 -1 0 14 Unmodified _SLGAAPKL_ ENST00000593829.5_1_19:18417816-18417990:-|nuORF 16.942295170755138 0.6606234159769251 3 S{I|L}SK{I|L}G 6 5 39.686 0.0 0.0 5.2532 0.0 0.0 0.0 167.08321558170158 167.08321558170158 15.796896906561033 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.0 S{I|L}SK{I|L}G 5.2532 - 615 + 1 0.917 86983.5 1.0 12096 5732 17816 HBL1_DMSO_200M_050219_1,17830 HBL1_DMSO_200M_050219_1,17830,SLGAAPKL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17831 85.29 592.0 81688.0 25 0 21967.0 -1 0 62 1072.8573134203273 0 1073.185961902142 PEAK CID FTMS 0 0 0 17816 75049.015625 0.6865362966232468 -1 0.0731430053710937 15 3 H 1 -1 5.4846 0.0 0.0 0.25585 0.0 0.0 1072.1072693263488 931.5244839118302 2003.631753238179 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.25585 - 33 + 1 0.917 40495.3 1.0 12097 5732 17816 HBL1_DMSO_200M_050219_1,17831 HBL1_DMSO_200M_050219_1,17831, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17832 85.3 606.0 203420.0 25 0 17527.0 -1 0 126 1096.9813892186198 2191.94822550404 2 1096.713183581829 MULTI CID FTMS 0 0 0 17816 117621.9765625 0.6769604074097055 5 -0.529510498046875 16 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TQY{I|L}TV 9 -1 57.66 0.0 0.0 2.6306 0.0 0.0 0.0 1110.3533518070274 1110.3533518070274 24.51183895335072 0.0 0.0 0.0 0 0.0 1.0 1.798455006504028 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TQY{I|L}TV 2.6306 - 15074 1 0.917 84399.9 1.0 12098 5732 17816 HBL1_DMSO_200M_050219_1,17832 HBL1_DMSO_200M_050219_1,17832, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17833 85.313 625.0 238460.0 25 0 21547.0 + 23532 LTLGCIMRSL 10 191 553.8082526999918 1105.6019524667836 2 555.2797119021416 MULTI CID FTMS 0 0 0 17816 68658.921875 0.0131477721682799 11 -1.0971755981445312 17 Unmodified _LTLGCIMRSL_ REV__ENST00000375442.8_1_X:53114276-53114454:+|nuORF 24.020572477871973 0.4289996903560794 3 [EP]Y[K{I|L}]TME 8 -1 24.614 0.0 0.0 2.2263 0.0 0.0 0.0 111.11636773055788 111.11636773055788 5.312346841520746 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.0 0.0 [EP]Y[K{I|L}]TME 2.2263 - 3642 1 0.917 116789.3 1.0 12099 5732 17816 HBL1_DMSO_200M_050219_1,17833 HBL1_DMSO_200M_050219_1,17833,LTLGCIMRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17834 85.324 637.0 69551.0 25 0 11861.0 -1 VPQRRRDLKLY 11 76 743.4346809817043 1484.8548090302086 2 743.9371826052666 MULTI CID FTMS 0 0 0 17816 132838.84375 0.6618158696727284 4 -0.4167404174804687 18 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VPQRRRDLKLY_ ENST00000354050.8_2_20:44527440-44527479:-|nuORF 0.4545168274142398 0.8730034954726786 3 {I|L} 1 -1 9.0908 0.0 0.0 0.61223 0.0 0.0 1353.7596379870429 0.0 1353.7596379870429 0.0 2.101082016915949 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.61223 + + 21 + 1 0.917 41318.9 1.0 12100 5732 17816 HBL1_DMSO_200M_050219_1,17834 HBL1_DMSO_200M_050219_1,17834,VPQRRRDLKLY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17835 85.335 665.0 173210.0 25 0 14409.0 -1 0 173 691.3325628727946 2070.9758592185835 3 691.6654540896416 MULTI CID FTMS 0 0 0 17816 128385.9296875 1.0 0 0.0 19 3 {[TV]|[{I|L}S]}DN{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C))YA{I|L}T{I|L} 12 -1 46.654 0.0 0.0 2.2528 0.0 0.0 0.0 644.289676927821 644.289676927821 18.077374200408443 0.0 0.0 0.0 0 0.0 2.0 0.9802046884880936 0.0 {[TV]|[{I|L}S]}DN{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C))YA{I|L}T{I|L} 2.2528 - 19001 1 0.917 91541.3 1.0 12101 5732 17816 HBL1_DMSO_200M_050219_1,17835 HBL1_DMSO_200M_050219_1,17835, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17836 85.348 666.0 137300.0 25 0 6185.5 + 21400 LPFYYIMPGLD 11 167 664.8326904177666 0 664.8326904177666 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _LPFYYIMPGLD_ REV__ENSG00000109182|ENST00000226432|CWH43 13.90604991867851 0.4141907700618076 3 P{M(Oxidation (M))|F}A 3 -1 12.703 0.0 0.0 0.95681 0.0 0.0 112.04140515018304 897.4340304010374 1009.4754355512204 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F}A 0.95681 - 124 + 1 0.917 74336.8 1.0 12102 5732 17816 HBL1_DMSO_200M_050219_1,17836 HBL1_DMSO_200M_050219_1,17836,LPFYYIMPGLD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17838 85.352 15.0 2963700.0 25 0 478580.0 + 35841 SVLDQKILL 9 74 514.8211598045917 1027.6277666759834 2 514.8216430544853 MULTI CID FTMS 0 0 0 17837 2748595.5 0.5074012754832905 1 -0.0846405029296875 1 Unmodified _SVLDQKILL_ ENSG00000142207|ENST00000382751|URB1 39.94969957227396 0.0757326808254658 3 [VS]{I|L}{[QG]|[NA]}{I|L}[VS]{I|L}{I|L} 10 4 + 44.639 0.0 0.0 4.3439 4.3439 74.229 0.0 0.0 0.0 4.739605237541859 4.929155219028942 4.739605237541859 2.442190502882156 0 1.1237125054200234 2.0 0.4247425010840047 0.0 [VS]{I|L}{[QG]|[NA]}{I|L}[VS]{I|L}{I|L};[VS]{[QG]|[NA]}{I|L}{I|L}[VS]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QK{I|L}[VS]{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}[VS]{I|L}{I|L}{I|L};[VS]{[QG]|[NA]}{I|L}[VS]{I|L}{I|L}{I|L};[KQ]D{I|L}{I|L}[VS]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QK[VS]{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]K{I|L}[VS]{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}K{I|L}[VS]{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}{I|L}[VS]{I|L}{I|L} 4.3439;4.1062;3.8826;3.4663;3.2286;3.0604;3.005;2.9866;2.9574;2.6688 -;-;-;-;-;-;-;-;-;- 230 1 0.919 40617.4 1.0 12103 5733 17837 HBL1_DMSO_200M_050219_1,17838 HBL1_DMSO_200M_050219_1,17838,SVLDQKILL True True SVLDQKILL 85.352223 514.821643054485 79637808.0 17837.0 ENSG00000142207|ENST00000382751|URB1 3.080059051513672 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17839 85.354 51.0 858760.0 25 0 170320.0 + -1 AHVLLVLLCLG 11 52 604.3665655421377 1206.7185781510752 2 604.3669311404228 MULTI CID FTMS 0 0 0 17837 1313381.75 0.7381444715602623 1 -0.0846405029296875 2 Carbamidomethyl (C) _AHVLLVLLC(Carbamidomethyl (C))LG_ REV__ENSG00000146197|ENST00000274938|SCUBE3;REV__nc|ENSG00000146197|Q8IX30-2|SCUBE3 0.3506318815782774 0.8734936314171269 3 Y 1 -1 1.42 0.0 0.0 0.11767 0.0 0.0 908.5855653110348 132.04599939517814 1040.6315647062129 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.11767 - 3 + 1 0.919 36336.5 1.0 12104 5733 17837 HBL1_DMSO_200M_050219_1,17839 HBL1_DMSO_200M_050219_1,17839,AHVLLVLLCLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17840 85.355 16.0 3863100.0 25 0 484040.0 + 1250 AILEDLQKI 9 91 521.8124082538679 1041.6102635745358 2 521.8112060427666 MULTI CID FTMS 0 0 0 17837 2416421.0 1.0 0 0.0 3 Unmodified _AILEDLQKI_ ENSG00000197142|ENST00000354655|ACSL5;nc|ENSG00000197142|Q9ULC5-3|ACSL5 34.40172386719151 0.1061884637610825 3 [{I|L}A]{I|L}ED{I|L}QK{I|L} 9 0 + 62.571 0.0 0.0 6.0071 6.0071 78.015 0.0 0.0 0.0 27.147642715192504 1.312789146393186 1.312789146393186 1.312789146393186 0 0.4247425010840047 2.0 0.4247425010840047 0.3807196863200844 + + [{I|L}A]{I|L}ED{I|L}QK{I|L};[{I|L}A]{I|L}ED{I|L}Q{I|L}K;[{I|L}A]{I|L}ED{I|L}[AG]K{I|L};[{I|L}A]{I|L}E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PK{I|L};[{I|L}A]{I|L}ED{I|L}[AG]{I|L}K;[{I|L}A]{I|L}E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}P{I|L}K;[{I|L}A]{I|L}{[VA]|[{I|L}G]}{[MS]|[{M(Oxidation (M))|F}A]}PK{I|L};[{I|L}A]{I|L}{[VA]|[{I|L}G]}{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}K;[{I|L}A]{I|L}{[VA]|[{I|L}G]}[WE]K{I|L};[{I|L}A]{I|L}{[VA]|[{I|L}G]}[WE]{I|L}K 6.0071;5.8811;5.1231;4.9975;4.997;4.8714;3.8244;3.6984;3.4863;3.3603 +;-;-;-;-;-;-;-;-;- + 419 + 1 0.919 55455.3 1.0 12105 5733 17837 HBL1_DMSO_200M_050219_1,17840 HBL1_DMSO_200M_050219_1,17840,AILEDLQKI True True AILEDLQKI 85.354741 521.811206042767 15381477.0 17837.0 nc|ENSG00000197142|Q9ULC5-3|ACSL5;;ENSG00000197142|ENST00000354655|ACSL5 3.716774543126424 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17841 85.356 38.0 1248400.0 25 0 87220.0 + 24754 MPFSVREGINI 11 69 631.8316949909115 1261.648837048623 2 631.8325073122978 MULTI CID FTMS 0 0 0 17837 1264709.125 0.7561392336619733 -2 0.2295608520507812 4 Unmodified _MPFSVREGINI_ ENSG00000164163|ENST00000296577|ABCE1 39.21299971606389 0.2245192836502623 3 MP{M(Oxidation (M))|F}SV 5 6 60.802 0.0 0.0 4.8192 0.0 0.0 0.0 697.3646334283811 697.3646334283811 39.11954370472159 0.0 0.0 0.0 0 0.7614393726401688 1.5228787452803376 0.0 0.0 + MP{M(Oxidation (M))|F}SV 4.8192 + + 50 + 1 0.919 44866.1 1.0 12106 5733 17837 HBL1_DMSO_200M_050219_1,17841 HBL1_DMSO_200M_050219_1,17841,MPFSVREGINI False True MPFSVREGINI 85.355921 631.832507312298 57408342.0 17837.0 ENSG00000164163|ENST00000296577|ABCE1 7.258522987365723 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17842 85.357 63.0 454230.0 25 0 75782.0 + 34233 SLPPSIVL 8 46 413.2575590407292 824.5005651482584 2 413.2576171755791 MULTI CID FTMS 0 0 0 17837 1123070.25 0.3717783124952155 -3 0.262786865234375 5 Unmodified _SLPPSIVL_ ENSG00000057468|ENST00000263187|MSH4 46.92087301778293 0.1537303740847981 3 {[TV]|[{I|L}S]}PPS{I|L}V{I|L} 8 0 + 52.128 0.0 0.0 6.3223 6.3223 87.179 0.0 0.0 0.0 0.6694678963061307 35.13805019828801 0.6694678963061307 8.010299956639813 0 0.6989700043360187 0.0 1.274227503252014 0.0 + + {[TV]|[{I|L}S]}PPS{I|L}V{I|L};{[TV]|[{I|L}S]}PP{I|L}SV{I|L} 6.3223;5.3508 +;- + 94 1 0.919 29865.1 1.0 12107 5733 17837 HBL1_DMSO_200M_050219_1,17842 HBL1_DMSO_200M_050219_1,17842,SLPPSIVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17843 85.359 30.0 506190.0 25 0 51657.0 + 27076 PEVLKEIP 8 43 462.7729632992287 923.5313736652574 2 462.7733947634697 MULTI CID FTMS 0 0 0 17837 1016758.6875 0.3783315590568936 -3 0.262786865234375 6 Unmodified _PEVLKEIP_ REV__nc|ENSG00000143751|Q6IQ49-3|SDE2 2.577480529830294 0.808687252328423 3 A 1 -1 3.9794 0.0 0.0 0.43089 0.0 0.0 767.4048152929903 82.0670641534789 849.4718794464692 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.43089 - 3 + 1 0.919 18696.3 1.0 12108 5733 17837 HBL1_DMSO_200M_050219_1,17843 HBL1_DMSO_200M_050219_1,17843,PEVLKEIP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17844 85.361 84.0 245100.0 25 0 25233.0 + 30760 RHRRLAVRGS 10 45 403.2467035210808 1206.7182811634425 3 403.2465698122978 MULTI CID FTMS 0 0 0 17837 1020738.75 1.0 0 0.0 7 Unmodified _RHRRLAVRGS_ REV__ENST00000327026.7_1_17:80112845-80113109:-|nuORF 0.1593219195374162 0.7258995344399193 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 0.919 22610.6 1.0 12109 5733 17837 HBL1_DMSO_200M_050219_1,17844 HBL1_DMSO_200M_050219_1,17844,RHRRLAVRGS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17845 85.362 45.0 558610.0 25 0 83716.0 + 33722 SLADDSVLERL 11 51 609.322382366835 1216.63021180047 2 609.3226196169853 MULTI CID FTMS 0 0 0 17837 874085.4375 1.0 0 0.0 8 Unmodified _SLADDSVLERL_ ENSG00000112159|ENST00000369393|MDN1 17.04857598603903 0.6805168445818576 3 {[TV]|[{I|L}S]}ADDSV{I|L} 8 3 62.384 0.0 0.0 5.1276 0.0 0.0 0.0 413.2156466119751 413.2156466119751 55.39381281052492 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[TV]|[{I|L}S]}ADDSV{I|L} 5.1276 + + 43 + 1 0.919 23440.8 1.0 12110 5733 17837 HBL1_DMSO_200M_050219_1,17845 HBL1_DMSO_200M_050219_1,17845,SLADDSVLERL False True SLADDSVLERL 85.361793 609.322619616985 11898835.0 17837.0 ENSG00000112159|ENST00000369393|MDN1 8.162529309590658 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17846 85.363 29.0 1380300.0 25 0 101790.0 -1 AGDKSLPCHR 10 80 570.7829550813793 1139.5513572295586 2 570.7828857302666 MULTI CID FTMS 0 0 0 17837 845372.75 0.8835759221458188 -2 0.2295608520507812 9 Carbamidomethyl (C) _AGDKSLPC(Carbamidomethyl (C))HR_ ENSG00000239474|ENST00000284669|KLHL41;nc|ENSG00000239474|O60662-2|KLHL41 14.838274106304384 0.5985701837916485 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}E 5 -1 21.314 0.0 0.0 1.8704 0.0 0.0 0.0 547.2539078489523 547.2539078489523 2.262850788319991 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.6171302707394362 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}E 1.8704 - 141 1 0.919 40494.4 1.0 12111 5733 17837 HBL1_DMSO_200M_050219_1,17846 HBL1_DMSO_200M_050219_1,17846,AGDKSLPCHR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17847 85.364 32.0 1318100.0 25 0 126210.0 + 34402 SLVENIERL 9 77 536.8043223325685 1071.594091731937 2 536.8038207888603 MULTI CID FTMS 0 0 0 17837 746782.0625 1.0 0 0.0 10 Unmodified _SLVENIERL_ ENSG00000234127|ENST00000454678|TRIM26 23.78978130925829 0.2284941198415988 3 {[TV]|[{I|L}S]}VEN{I|L}ER{I|L} 9 0 + 59.831 0.0 0.0 5.5833 5.5833 86.367 0.0 0.0 0.0 32.08342832424712 9.87765543582988 9.87765543582988 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.0 + + {[TV]|[{I|L}S]}VEN{I|L}ER{I|L};{[TV]|[{I|L}S]}VEGG{I|L}ER{I|L};{[TV]|[{I|L}S]}VE[TP]{[SA]|[TG]}R{I|L};NV[KS]N{I|L}ER{I|L};NV{I|L}TD{I|L}ER{I|L};{[TV]|[{I|L}S]}{[SA]|[TG]}[PS]{I|L}ER{I|L};N[WK]N{I|L}ER{I|L};NV[KS]GG{I|L}ER{I|L};N[WK]GG{I|L}ER{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WP]{I|L}ER{I|L} 5.5833;4.724;4.1723;3.3091;3.1198;2.8099;2.7161;2.4498;1.8517;0.59492 +;-;-;-;-;-;-;-;-;- + 231 + 1 0.919 41648.7 1.0 12112 5733 17837 HBL1_DMSO_200M_050219_1,17847 HBL1_DMSO_200M_050219_1,17847,SLVENIERL False True SLVENIERL 85.364152 536.80382078886 11032483.0 17837.0 ENSG00000234127|ENST00000454678|TRIM26 5.134034474690755 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17848 85.366 64.0 1136300.0 25 0 128700.0 + 45587 YVFPGVTRL 9 67 526.3001756426642 1050.5857983521282 2 526.3005859255791 MULTI CID FTMS 0 0 0 17837 684202.125 0.4203471954452494 -2 0.2295608520507812 11 Unmodified _YVFPGVTRL_ ENSG00000160284|ENST00000291672|SPATC1L;nc|ENSG00000160284|Q9H0A9-2|SPATC1L 19.62595529434964 0.305431704817896 3 [YV]{M(Oxidation (M))|F}PR 5 4 50.273 0.0 0.0 4.7852 0.0 0.0 0.0 385.2189119928344 385.2189119928344 19.84005908836324 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 [YV]{M(Oxidation (M))|F}PR 4.7852 - 87 + 1 0.919 63557.2 1.0 12113 5733 17837 HBL1_DMSO_200M_050219_1,17848 HBL1_DMSO_200M_050219_1,17848,YVFPGVTRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17849 85.367 35.0 1174800.0 25 0 105370.0 + 10186 FQDPVPLTV 9 83 508.2764909113976 1014.5384288895953 2 508.2763854861259 MULTI CID FTMS 0 0 0 17837 626386.6875 0.1775957863483521 -3 0.262786865234375 12 Unmodified _FQDPVPLTV_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 27.628801355627647 0.1796483985696185 3 [{I|L}P]TV 4 5 24.085 0.0 0.0 2.374 0.0 0.0 0.0 601.2604497238326 601.2604497238326 8.282957030980711 0.0 0.0 0.0 0 0.0 1.154901959985743 0.3494850021680094 0.0 + [{I|L}P]TV 2.374 + + 170 1 0.919 39109.8 1.0 12114 5733 17837 HBL1_DMSO_200M_050219_1,17849 HBL1_DMSO_200M_050219_1,17849,FQDPVPLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17850 85.368 51.0 972310.0 25 0 132180.0 + 37379 TLAAAVIIDL 10 88 500.3080371982834 998.6015214633668 2 500.3083679080009 MULTI CID FTMS 0 0 0 17837 408174.90625 0.0801033255619303 -4 0.39453125 13 Unmodified _TLAAAVIIDL_ REV__ENSG00000106066|ENST00000265394|CPVL 20.453626601364224 0.5043500229302764 3 [TA]{I|L}AV{I|L}{M(Oxidation (M))|F} 7 -1 39.02 0.0 0.0 3.9075 0.0 0.0 0.0 280.1696726686982 280.1696726686982 11.449338721006509 0.0 0.0 0.0 0 0.0 2.0 0.8252574989159953 0.0 [TA]{I|L}AV{I|L}{M(Oxidation (M))|F} 3.9075 - 494 1 0.919 44426.2 1.0 12115 5733 17837 HBL1_DMSO_200M_050219_1,17850 HBL1_DMSO_200M_050219_1,17850,TLAAAVIIDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17851 85.375 397.0 530570.0 25 0 25941.0 -1 0 130 1037.9733608239028 2073.9321687146057 2 1037.974047839642 MULTI CID FTMS 0 0 0 17837 407640.25 0.3465958040626183 2 -0.124847412109375 14 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EREA[HS]TS{I|L}DG{M(Oxidation (M))|F}S 15 -1 77.091 0.0 0.0 3.7171 0.0 0.0 0.0 420.1597803784459 420.1597803784459 45.64478327073884 0.0 0.0 0.0 0 1.610924374808178 1.0969100130080565 1.7134679910804405 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EREA[HS]TS{I|L}DG{M(Oxidation (M))|F}S 3.7171 - 34652 1 0.919 138531.5 1.0 12116 5733 17837 HBL1_DMSO_200M_050219_1,17851 HBL1_DMSO_200M_050219_1,17851, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17852 85.383 451.0 403150.0 25 0 30819.0 + 32379 RYQFIEEAF 9 140 601.7958019203685 1201.577050907537 2 601.7981445193291 MULTI CID FTMS 0 0 0 17837 305284.8125 0.8582742905087076 -1 0.1564178466796875 15 Unmodified _RYQFLEEAF_ nc|ENSG00000122779|O15164-2|TRIM24;ENSG00000122779|ENST00000343526|TRIM24 47.74868867922204 0.0453060283459952 3 [YT]TE{I|L}RC(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F} 9 6 + 70.143 0.0 0.0 5.8376 5.8376 81.884 0.0 0.0 0.0 4.203103093438969 4.203103093438969 4.203103093438969 4.203103093438969 0 0.7742275032520141 2.0 0.0 0.3807196863200844 [YT]TE{I|L}RC(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F};[YQ]R{M(Oxidation (M))|F}{I|L}EEA{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}H[KT]{I|L}EEA{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}]QR{I|L}EEA{M(Oxidation (M))|F};[YQ]{M(Oxidation (M))|F}R{I|L}EEA{M(Oxidation (M))|F};[HV]EE{I|L}RC(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F};[YT]TE{I|L}R[CG]{I|L}{M(Oxidation (M))|F};[YT]ET{I|L}RC(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F};[TA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}EEA{M(Oxidation (M))|F};[YT]TE{I|L}{M(Oxidation (M))|F}RC(Carbamidomethyl (C)){I|L} 5.8376;5.4878;5.2373;5.2373;5.2373;5.1566;5.0712;5.042;4.9474;4.9204 -;-;-;-;-;-;-;-;-;- 1624 + 1 0.919 133019.7 1.0 12117 5733 17837 HBL1_DMSO_200M_050219_1,17852 HBL1_DMSO_200M_050219_1,17852,RYQFLEEAF True True RYQFIEEAF 85.383383 601.798144519329 4079246.0 17837.0 nc|ENSG00000122779|O15164-2|TRIM24;;ENSG00000122779|ENST00000343526|TRIM24 5.0346934000651045 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17853 85.392 514.0 172040.0 25 0 9397.2 + 38331 TQLGPPYHILV 11 120 619.3514307462522 1236.6883085593042 2 619.6708862185478 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _TQLGPPYHILV_ ENSG00000119616|ENST00000341162|FCF1 29.081581746732265 0.4093582134107448 3 [QT]{I|L}GP 5 6 31.325 0.0 0.0 2.533 0.0 0.0 0.0 737.4064425104124 737.4064425104124 8.643948177770717 0.0 0.0 0.0 0 0.8807196863200843 0.4814860601221125 0.0 0.0 + [QT]{I|L}GP 2.533 + + 553 + 1 0.919 70784.9 1.0 12118 5733 17837 HBL1_DMSO_200M_050219_1,17853 HBL1_DMSO_200M_050219_1,17853,TQLGPPYHILV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17854 85.402 561.0 81706.0 25 0 15161.0 -1 0 58 1143.8284364357255 3428.4634799073765 3 1144.495898425579 MULTI CID FTMS 0 0 0 17837 149392.59375 1.0 0 0.0 17 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20387 0.0 0.0 1912.68035110054 1365.7036775608324 3278.384028661372 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20387 - 16 + 1 0.919 41923.3 1.0 12119 5733 17837 HBL1_DMSO_200M_050219_1,17854 HBL1_DMSO_200M_050219_1,17854, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17855 85.412 546.0 193810.0 25 0 7963.0 + 44705 YPGYHDQLHC 10 137 616.7592906710845 1231.504028408969 2 616.7599365115166 MULTI CID FTMS 0 0 0 17837 144751.578125 0.6548428436721128 -3 0.262786865234375 18 Unmodified _YPGYHDQLHC_ REV__ENSG00000149970|ENST00000379510|CNKSR2;REV__nc|ENSG00000149970|Q8WXI2-2|CNKSR2;REV__nc|ENSG00000149970|Q8WXI2-4|CNKSR2;REV__nc|ENSG00000149970|Q8WXI2-5|CNKSR2 12.531546534597751 0.6372748319968624 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L} 7 -1 48.443 0.0 0.0 3.9336 0.0 0.0 0.0 384.0704453961751 384.0704453961751 28.77089651011697 0.0 0.0 0.0 0 1.0 0.958607314841775 0.2614393726401688 1.6610892374447828 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L} 3.9336 - 849 1 0.919 80968.5 1.0 12120 5733 17837 HBL1_DMSO_200M_050219_1,17855 HBL1_DMSO_200M_050219_1,17855,YPGYHDQLHC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17856 85.422 541.0 192370.0 25 0 32962.0 + -1 SQPEIFENI 9 94 1076.1353725043923 3225.384288113377 3 1076.794970691204 MULTI CID FTMS 0 0 0 -1 0 19 nc|ENSG00000147231|Q6NSI4-4|RADX;ENSG00000147231|ENST00000372548|RADX;nc|ENSG00000147231|Q6NSI4-3|RADX;nc|ENSG00000147231|Q6NSI4-2|RADX 3 [EP]{[QS]|[NT]}{I|L}{M(Oxidation (M))|F}E 7 -1 19.102 0.0 0.0 0.59224 0.0 0.0 0.0 2391.9752351765896 2391.9752351765896 8.132936814871723 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.2887254899964357 [EP]{[QS]|[NT]}{I|L}{M(Oxidation (M))|F}E 0.59224 - 1052 1 0.919 87201.2 1.0 12121 5733 17837 HBL1_DMSO_200M_050219_1,17856 HBL1_DMSO_200M_050219_1,17856, False False SQPEIFENI 85.421501 1076.7949706912 158826.4375 17837.0 nc|ENSG00000147231|Q6NSI4-4|RADX;;ENSG00000147231|ENST00000372548|RADX;;nc|ENSG00000147231|Q6NSI4-3|RADX;;nc|ENSG00000147231|Q6NSI4-2|RADX 4.203633944193522 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17857 85.433 570.0 211010.0 25 0 27742.0 + -1 VTLQRVVCHRK 11 126 698.4012264652603 1394.7878999973204 2 698.4016601443291 MULTI CID FTMS 0 0 0 17837 117449.4140625 0.4412437785420427 -2 0.2295608520507812 20 Carbamidomethyl (C) _VTLQRVVC(Carbamidomethyl (C))HRK_ REV__ENSG00000128052|ENST00000263923|KDR;REV__nc|ENSG00000128052|P35968-2|KDR;REV__nc|ENSG00000128052|P35968-3|KDR 2.9952420565917617 0.861016188266951 3 P 1 -1 10.181 0.0 0.0 0.72994 0.0 0.0 1279.7238721426313 0.0 1279.7238721426313 0.0 0.6481692890834001 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.72994 - 202 + 1 0.919 97897.2 1.0 12122 5733 17837 HBL1_DMSO_200M_050219_1,17857 HBL1_DMSO_200M_050219_1,17857,VTLQRVVCHRK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17859 85.437 3.1 11073000.0 25 0 861540.0 + 19623 LGDSFILLVQG 11 69 581.329401324827 1160.644249716454 2 581.3297607302666 MULTI CID FTMS 0 0 0 17858 15098808.0 1.0 0 0.0 1 Unmodified _LGDSFILLVQG_ REV__ENSG00000172752|ENST00000373157|COL6A5;REV__nc|ENSG00000172752|A8TX70-2|COL6A5;REV__nc|ENSG00000172752|A8TX70|COL6A5 24.99096001346401 0.505407273373304 3 {I|L}K{I|L}{I|L}V{[QG]|[NA]} 7 -1 47.237 0.0 0.0 4.0699 0.0 0.0 391.1383481160208 0.0 391.1383481160208 0.0 34.137663434659586 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3252574989159953 {I|L}K{I|L}{I|L}V{[QG]|[NA]} 4.0699 - 111 1 0.919 34419.4 1.0 12123 5734 17858 HBL1_DMSO_200M_050219_1,17859 HBL1_DMSO_200M_050219_1,17859,LGDSFILLVQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17860 85.438 6.7 4942400.0 25 0 673280.0 18687 LAIWEASL 8 54 451.75254133747273 901.4905297417456 2 451.7528564333916 MULTI CID FTMS 0 0 0 17858 7656937.5 0.3281769022093425 3 -0.2884521484375 2 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 20.871210003555333 0.6025813472596342 3 [{I|L}A][WE]S 5 3 30.954 0.0 0.0 3.4337 0.0 0.0 0.0 312.19381278301427 312.19381278301427 11.8692447996815 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A][WE]S 3.4337 - 47 1 0.919 33308.0 1.0 12124 5734 17858 HBL1_DMSO_200M_050219_1,17860 HBL1_DMSO_200M_050219_1,17860,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17861 85.439 8.5 4309200.0 25 0 597530.0 + 2852 AVATAIVVAV 10 62 457.28944756824814 912.5643422032964 2 457.2899963259697 MULTI CID FTMS 0 0 0 17858 5619739.0 0.7934752129139712 -2 0.241058349609375 3 Unmodified _AVATAIVVAV_ REV__ENSG00000143226|ENST00000271450|FCGR2A;REV__ENST00000467525.5_2_1:161479802-161487805:+|nuORF;REV__nc|ENSG00000143226|P12318-2|FCGR2A 42.09456458481378 0.1354489350322421 3 {[TV]|[{I|L}S]}VN{I|L}V 6 -1 44.104 0.0 0.0 4.833 0.0 0.0 0.0 284.16008129925257 284.16008129925257 25.431825014007213 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.25 0.0 {[TV]|[{I|L}S]}VN{I|L}V 4.833 - 345 1 0.919 35532.7 1.0 12125 5734 17858 HBL1_DMSO_200M_050219_1,17861 HBL1_DMSO_200M_050219_1,17861,AVATAIVVAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17862 85.44 21.0 2968600.0 25 0 347100.0 + 12863 GVVPQLVKL 9 79 476.8130743891318 951.6115958450636 2 476.8135864138603 MULTI CID FTMS 0 0 0 17858 2612053.5 0.0436103454042248 8 -0.8106231689453125 4 Unmodified _GVVPQLVKL_ ENSG00000182481|ENST00000330459|KPNA2 42.09456458481378 0.0639583784996157 3 [QP]{I|L}VK{I|L} 6 3 39.13 0.0 0.0 4.1119 0.0 0.0 0.0 270.1431869918012 270.1431869918012 5.235965318601359 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 + [QP]{I|L}VK{I|L} 4.1119 + + 132 1 0.919 53260.1 1.0 12126 5734 17858 HBL1_DMSO_200M_050219_1,17862 HBL1_DMSO_200M_050219_1,17862,GVVPQLVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17863 85.442 21.0 2065300.0 25 0 213400.0 + 11823 DAFRTLGL 8 72 446.74781623193104 891.4810795306621 2 446.7480041384697 MULTI CID FTMS 0 0 0 17858 2606080.5 0.1264694092760456 5 -0.4878158569335937 5 Unmodified _GLPDAHLGL_ chr12:8604892-8605215|31|16.84|0.02|9.9|-|ENST00000537228|AICDA,AICDA;nc|ENSG00000111732|Q9GZX7-2|AICDA;ENSG00000111732|ENST00000229335|AICDA;ENST00000545576.1_1_12:8756882-8757648:-|nuORF 23.1484247019978 0.2366544122328345 3 {[DA]|[EG]}{M(Oxidation (M))|F} 3 7 33.952 0.0 0.0 3.8085 0.0 0.0 0.0 555.3268526666624 555.3268526666624 -1.7486502786740488 0.0 -1.7486502786740488 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F} 3.8085 - 34 + 1 0.919 40103.1 1.0 12127 5734 17858 HBL1_DMSO_200M_050219_1,17863 HBL1_DMSO_200M_050219_1,17863,GLPDAHLGL False False DAFRTLGL 85.441582 446.74800413847 611496048.0 17858.0 chr12:8604892-8605215|31|16.84|0.02|9.9|-|ENST00000537228|AICDA,AICDA;;nc|ENSG00000111732|Q9GZX7-2|AICDA;;ENSG00000111732|ENST00000229335|AICDA;;ENST00000545576.1_1_12:8756882-8757648:-|nuORF 5.483768781026204 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17864 85.443 13.0 3237900.0 25 0 279270.0 + 4504 DAYKGLFEV 9 72 521.2655984481975 1040.5166439631948 2 521.2663452029228 MULTI CID FTMS 0 0 0 17858 2331272.25 1.0 0 0.0 6 Unmodified _DAYKGLFEV_ ENSG00000101474|ENST00000217456|APMAP;nc|ENSG00000101474|Q9HDC9-2|APMAP 10.073929032068715 0.563993802247229 3 [{M(Oxidation (M))|F}V]WYW[K{I|L}] 7 8 + 18.996 0.0 0.0 1.8257 1.8257 73.483 0.0 0.0 0.0 -10.46765560293629 4.392200779062492 -10.46765560293629 5.351132016973493 0 0.0 0.0 0.0 0.0 [{M(Oxidation (M))|F}V]WYW[K{I|L}];[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M]P[K{I|L}];{[QN]|[E{I|L}]|[KN]}D[Q{I|L}][VP]{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]W[HD]P[K{I|L}];{NN|[MP]|[D{I|L}]|[EV]}E[Q{I|L}][VP]{NN|[MP]|[D{I|L}]|[EV]} 1.8257;1.3114;0.99985;0.92894;0.42124 -;-;-;-;- 111 + 1 0.919 39587.7 1.0 12128 5734 17858 HBL1_DMSO_200M_050219_1,17864 HBL1_DMSO_200M_050219_1,17864,DAYKGLFEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17865 85.444 13.0 2138400.0 25 0 135790.0 + 15806 ISFPICETV 9 61 504.7566657755049 1007.49877861781 2 504.7562133669853 MULTI CID FTMS 0 0 0 17858 2296472.5 0.7781247916695432 3 -0.2884521484375 7 Unmodified _ISFPICETV_ REV__ENSG00000173389|ENST00000310914|IQCF1 7.910154910731844 0.6385446671287552 3 TV 2 -1 19.45 0.0 0.0 1.9306 0.0 0.0 789.3713352357771 0.0 789.3713352357771 0.0 9.986512420283232 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 TV 1.9306 + + 26 + 1 0.919 25867.0 1.0 12129 5734 17858 HBL1_DMSO_200M_050219_1,17865 HBL1_DMSO_200M_050219_1,17865,ISFPICETV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17866 85.445 24.0 1882900.0 25 0 179050.0 + 16071 ITPDEFHFV 9 69 552.7714627811108 1103.5283726290215 2 552.7719604372978 MULTI CID FTMS 0 0 0 17858 1815100.75 0.6314034650298861 1 -0.0402069091796875 8 Unmodified _ITPDEFHFV_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 21.74664581756881 0.2544899275067181 3 [{I|L}T]PD[{M(Oxidation (M))|F}E]HV{M(Oxidation (M))|F} 9 2 + 56.132 0.0 0.0 5.0866 5.0866 87.901 0.0 0.0 0.0 23.207480099788427 11.478174818886371 11.478174818886371 24.50318762307695 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]PD[{M(Oxidation (M))|F}E]HV{M(Oxidation (M))|F};[{I|L}T][{I|L}T]{M(Oxidation (M))|F}D[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}ED{M(Oxidation (M))|F}[{I|L}T][VP] 5.0866;2.8661;2.4752 -;-;- 104 + 1 0.919 44136.2 1.0 12130 5734 17858 HBL1_DMSO_200M_050219_1,17866 HBL1_DMSO_200M_050219_1,17866,ITPDEFHFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17867 85.446 29.0 1664300.0 25 0 238810.0 + 4648 DAYVLPKLY 9 75 541.2999781941046 1080.585403455009 2 541.3006469607353 MULTI CID FTMS 0 0 0 17858 1378462.0 0.0048694649278079 25 -2.413780212402344 9 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 37.97399986684836 0.0865783450051559 3 {[DA]|[EG]}YV 4 5 29.698 0.0 0.0 2.7483 0.0 0.0 0.0 629.3656518283091 629.3656518283091 8.984484532805155 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}YV 2.7483 + + 78 1 0.919 41118.2 1.0 12131 5734 17858 HBL1_DMSO_200M_050219_1,17867 HBL1_DMSO_200M_050219_1,17867,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17868 85.448 74.0 915540.0 25 0 104430.0 -1 IFYAVCYMM 9 94 578.7451015026397 1155.4756500720794 2 578.7461425662041 MULTI CID FTMS 0 0 0 17858 1096235.75 0.7140309558018864 1 -0.0402069091796875 10 Oxidation (M) _IFYAVCYM(Oxidation (M))M_ ENSG00000104290|ENST00000240093|FZD3 9.347437153973935 0.588369872918737 3 [DP]VVN 5 -1 33.729 0.0 0.0 2.919 0.0 0.0 0.0 628.1932153399106 628.1932153399106 15.457574905606748 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.3807196863200844 [DP]VVN 2.919 - 110 1 0.919 58828.4 1.0 12132 5734 17858 HBL1_DMSO_200M_050219_1,17868 HBL1_DMSO_200M_050219_1,17868,IFYAVCYMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17869 85.449 26.0 2053900.0 25 0 199310.0 + 9850 FPFGKIGTV 9 82 483.2764472907161 964.5383416482322 2 483.2763244509697 MULTI CID FTMS 0 0 0 17858 1070187.0 0.0709387675396112 20 -1.9580535888671875 11 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 37.97399986684836 0.0865783450051559 3 {M(Oxidation (M))|F}PE 3 7 30.445 0.0 0.0 3.1565 0.0 0.0 573.3497661508168 0.0 573.3497661508168 0.0 14.75895023531386 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}PE 3.1565 - 114 1 0.919 47192.8 1.0 12133 5734 17858 HBL1_DMSO_200M_050219_1,17869 HBL1_DMSO_200M_050219_1,17869,FPFGKIGTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17870 85.45 32.0 1484100.0 25 0 149970.0 + 21363 LPFPAQPPVV 10 81 532.8105388036046 1063.606524674009 2 532.8107787966728 MULTI CID FTMS 0 0 0 17858 1050926.625 0.9007719880637236 -1 0.0846405029296875 12 Unmodified _LPFPAQPPVV_ ENSG00000139746|ENST00000438737|RBM26;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26 21.74664581756881 0.480091245866545 3 [VP]{[NV]|[RG]}M{I|L}P 7 8 26.462 0.0 0.0 2.488 0.0 0.0 0.0 310.1776474567185 310.1776474567185 12.482741436872471 0.0 0.0 0.0 0 0.8252574989159953 1.0969100130080565 0.0 0.3807196863200844 [VP]{[NV]|[RG]}M{I|L}P 2.488 - 112 1 0.919 46328.2 1.0 12134 5734 17858 HBL1_DMSO_200M_050219_1,17870 HBL1_DMSO_200M_050219_1,17870,LPFPAQPPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17871 85.452 40.0 1122100.0 25 0 151750.0 + -1 ADLRWCTTL 9 70 568.282695780671 1134.550838628142 2 568.2836181521416 MULTI CID FTMS 0 0 0 17858 936219.3125 0.1297760629371812 2 -0.1756820678710937 13 Carbamidomethyl (C) _ADLRWC(Carbamidomethyl (C))TTL_ REV__ENST00000510377.5_1_4:144106135-144106210:+|nuORF 19.256988751693697 0.3154191944385105 3 {[DA]|[EG]}[MT]CV{I|L}[RN]{I|L} 10 -1 + 48.97 0.0 0.0 4.3162 4.3162 86.283 0.0 0.0 0.0 33.767959391884546 9.744689683626646 9.744689683626646 48.96977168525439 0 0.5 1.5228787452803376 0.0 0.3054621874040891 {[DA]|[EG]}[MT]CV{I|L}[RN]{I|L} 4.3162 - 52 + 1 0.919 40990.6 1.0 12135 5734 17858 HBL1_DMSO_200M_050219_1,17871 HBL1_DMSO_200M_050219_1,17871,ADLRWCTTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17872 85.453 83.0 722770.0 25 0 86190.0 + 25706 NIGEVVLSL 9 94 472.2768233005065 942.5390936678132 2 472.2769653201103 MULTI CID FTMS 0 0 0 17858 725834.625 0.0623758858147777 3 -0.2884521484375 14 Unmodified _NIGEVVLSL_ REV__ENST00000482490.5_1_3:64554138-64554207:-|nuORF 32.30548876998284 0.1201446275138228 3 {NN|[MP]|[D{I|L}]|[EV]}GVQ{I|L} 6 -1 38.963 0.0 0.0 4.1338 0.0 0.0 0.0 314.17218627939434 314.17218627939434 12.307131330965715 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.6109243748081782 0.0 {NN|[MP]|[D{I|L}]|[EV]}GVQ{I|L} 4.1338 - 659 1 0.919 50174.5 1.0 12136 5734 17858 HBL1_DMSO_200M_050219_1,17872 HBL1_DMSO_200M_050219_1,17872,NIGEVVLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17873 85.455 71.0 614570.0 25 0 48929.0 + 38325 TQLESSWEL 9 70 546.7638338791755 1091.513114825151 2 546.7646362185478 MULTI CID FTMS 0 0 0 17858 661216.75 0.8552595976795592 -2 0.241058349609375 15 Unmodified _TQLESSWEL_ ENSG00000092148|ENST00000399332|HECTD1 9.38312468134398 0.5871240394367778 3 [QT]{I|L}E[Y{I|L}]P[DN] 9 5 + 25.634 0.0 0.0 2.3484 2.3484 77.003 0.0 0.0 0.0 5.623468415207501 10.14908724233678 5.623468415207501 9.03212513775344 0 0.0 0.0 0.25 0.0 [QT]{I|L}E[Y{I|L}]P[DN];[Q{I|L}]TE[Y{I|L}]P[DN];{[QN]|[E{I|L}]|[KN]}[QT][Y{I|L}]P[DN];[WE]R[Y{I|L}]YY;[QT][RH][QP]P[DN];{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}][W{I|L}][DN] 2.3484;1.521;0.95314;0.93867;0.90639;0.083842 -;-;-;-;-;- 82 1 0.919 39852.0 1.0 12137 5734 17858 HBL1_DMSO_200M_050219_1,17873 HBL1_DMSO_200M_050219_1,17873,TQLESSWEL False True TQLESSWEL 85.455114 546.764636218548 6932765.5 17858.0 ENSG00000092148|ENST00000399332|HECTD1 0.1110952695210774 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17874 85.457 68.0 896950.0 25 0 126210.0 + 1326 AIYEGDWKF 9 84 564.77195632123 1127.52935970926 2 564.7726318240166 MULTI CID FTMS 0 0 0 17858 664258.625 0.9600507371374022 -1 0.0846405029296875 16 Unmodified _AIYEGDWKF_ ENSG00000139714|ENST00000355329|MORN3;nc|ENSG00000139714|Q6PF18-2|MORN3 27.22323531849824 0.1848086127304535 3 [{I|L}A]YE[DG]WK{M(Oxidation (M))|F} 9 0 + 53.918 0.0 0.0 4.782 4.782 85.536 0.0 0.0 0.0 37.97614693140829 6.030768805449185 6.030768805449185 13.521825181113629 0 0.3807196863200844 2.0 0.4247425010840047 0.0 + + [{I|L}A]YE[DG]WK{M(Oxidation (M))|F};[{I|L}A]YE[{I|L}P][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F} 4.782;3.5827 +;- + 69 + 1 0.919 49408.0 1.0 12138 5734 17858 HBL1_DMSO_200M_050219_1,17874 HBL1_DMSO_200M_050219_1,17874,AIYEGDWKF False True AIYEGDWKF 85.456739 564.772631824017 6872667.5 17858.0 nc|ENSG00000139714|Q6PF18-2|MORN3;;ENSG00000139714|ENST00000355329|MORN3 7.00378942489624 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17875 85.458 70.0 584800.0 25 0 51162.0 + 26976 PEEVVALDL 9 71 492.76610304106543 983.5176531489308 2 492.7662841677666 MULTI CID FTMS 0 0 0 17858 656182.0 0.7116347598705667 6 -0.5840911865234375 17 Unmodified _PEEVVALDL_ REV__nc|ENSG00000259706|Q58FF3|HSP90B2P 20.453626601364224 0.2830276176381075 3 [EP]D{I|L}VA 6 -1 20.891 0.0 0.0 2.1241 0.0 0.0 0.0 356.17625845582467 356.17625845582467 3.9182278046353134 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [EP]D{I|L}VA 2.1241 - 110 1 0.919 38096.8 1.0 12139 5734 17858 HBL1_DMSO_200M_050219_1,17875 HBL1_DMSO_200M_050219_1,17875,PEEVVALDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17876 85.461 113.0 813450.0 25 0 201490.0 + + -1 RTLETLIRL 9 87 557.8503559949683 1113.6861590567364 2 557.8511840701103 MULTI CID FTMS 0 0 0 17858 635341.625 0.0156001605878888 13 -1.2550811767578125 18 Carbamidomethyl (C) _LLLC(Carbamidomethyl (C))LKELL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 19.256988751693697 0.3154191944385105 3 [VG]T{I|L}EC(Carbamidomethyl (C)) 6 -1 27.963 0.0 0.0 2.5108 0.0 0.0 0.0 451.36765466861567 451.36765466861567 13.983303362391167 0.0 0.0 0.0 0 0.5866968715561641 1.0457574905606752 0.0 0.0 [VG]T{I|L}EC(Carbamidomethyl (C)) 2.5108 - 71 + 1 0.919 75103.0 1.0 12140 5734 17858 HBL1_DMSO_200M_050219_1,17876 HBL1_DMSO_200M_050219_1,17876,LLLCLKELL False False RTLETLIRL 85.460768 557.85118407011 2101009600.0 17858.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 1.8264236251513164 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17877 85.467 324.0 685240.0 25 0 66200.0 9993 FPITALREI 9 177 530.3133996237226 1058.612246314245 2 530.3138915896416 MULTI CID FTMS 0 0 0 17858 596726.1875 0.8299464233775369 1 -0.0402069091796875 19 Unmodified _FPITALREI_ ENSG00000136807|ENST00000373264|CDK9;nc|ENSG00000136807|P50750-2|CDK9 57.72198328787511 0.0273433238377839 3 {M(Oxidation (M))|F}P{I|L}T[{I|L}A]WV{I|L} 9 2 + 60.429 0.0 0.0 5.7083 5.7083 83.48 0.0 0.0 0.0 29.64001255353097 6.14393726401687 6.14393726401687 6.064921830680703 0 1.079689690656103 0.0 1.1549471895720984 0.0 {M(Oxidation (M))|F}P{I|L}T[{I|L}A]WV{I|L};{M(Oxidation (M))|F}P{I|L}{I|L}[TA]WV{I|L};{M(Oxidation (M))|F}P{I|L}T[{I|L}A]W{I|L}V;[{I|L}T]AR{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PE;{M(Oxidation (M))|F}P{I|L}T[{I|L}P]PK{M(Oxidation (M))|F};{M(Oxidation (M))|F}P{I|L}T{[CP]|[EA]}[R{I|L}]{I|L};{M(Oxidation (M))|F}P{I|L}{I|L}[TA]W{I|L}V;{M(Oxidation (M))|F}P{I|L}{I|L}[TP]PK{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}T[KP]{I|L}P{M(Oxidation (M))|F};[TA]{I|L}R{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PE 5.7083;5.1354;5.0763;5.0007;4.8563;4.5973;4.5034;4.2834;4.0864;4.0365 -;-;-;-;-;-;-;-;-;- 2590 + 1 0.919 177871.7 1.0 12141 5734 17858 HBL1_DMSO_200M_050219_1,17877 HBL1_DMSO_200M_050219_1,17877,FPITALREI True True FPITAIREI 85.46666 530.313891589642 46102048.0 17858.0 nc|ENSG00000167258|Q9NYV4-2|CDK12;;ENSG00000167258|ENST00000447079|CDK12;;nc|ENSG00000065883|Q14004-2|CDK13;;nc|ENSG00000167258|Q9NYV4-3|CDK12;;ENSG00000065883|ENST00000181839|CDK13 4.675336201985677 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17878 85.473 342.0 754400.0 25 0 64698.0 + 45935 YYYDPLAGTY 10 180 613.2745662935358 1224.5345796538716 2 613.2744628787041 MULTI CID FTMS 0 0 0 17858 497375.375 0.9123608057522482 -1 0.0846405029296875 20 Unmodified _YYYDPLAGTY_ ENSG00000004534|ENST00000266022|RBM6;ENST00000434592.5_1_3:50097096-50127827:+|nuORF;ENST00000441115.5_1_3:50012785-50103056:+|nuORF;nc|ENSG00000004534|P78332-2|RBM6 65.23502041540118 0.0228537820337083 3 YYDYP{I|L}AGTY 10 2 + 62.955 0.0 0.0 5.1412 5.1412 81.485 0.0 0.0 0.0 20.361496297458537 10.012262311882765 10.012262311882765 6.021825181113627 0 1.135151878060192 2.0 0.0 0.0 YYDYP{I|L}AGTY;YYDYP{I|L}QTY;[NP]DDYP{I|L}AGTY;[DP]NDYP{I|L}AGTY;[{I|L}P]ADYYYGTY;[{I|L}P]DAYYYGTY;[{I|L}P]A{M(Oxidation (M))|F}A{[CP]|[EA]}DAGTY;[{I|L}P]A{M(Oxidation (M))|F}A[WE]AGTY;[{I|L}P]AYDYYGTY;[NP]DDYP{I|L}QTY 5.1412;4.6494;3.4784;3.4588;3.375;3.1765;3.1291;3.0808;2.9853;2.9831 -;-;-;-;-;-;-;-;-;- 2253 1 0.919 186963.9 1.0 12142 5734 17858 HBL1_DMSO_200M_050219_1,17878 HBL1_DMSO_200M_050219_1,17878,YYYDPLAGTY True True YYYDPLAGTY 85.472863 613.274462878704 5363104.0 17858.0 nc|ENSG00000004534|P78332-2|RBM6;;ENSG00000004534|ENST00000266022|RBM6;;ENST00000434592.5_1_3:50097096-50127827:+|nuORF;;ENST00000441115.5_1_3:50012785-50103056:+|nuORF 6.827220916748047 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17880 85.477 103.0 867920.0 25 0 124510.0 + 11465 GIGHWVVAV 9 109 469.2681621052244 936.5217712772488 2 469.2684203982353 MULTI CID FTMS 0 0 0 17879 459736.9375 0.4881968617527376 2 -0.2482452392578125 1 Unmodified _GIGHWVVAV_ ENST00000269919.10_1_19:18480032-18480299:+|nuORF 20.871210003555333 0.2717241269066626 3 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F} 4 7 23.889 0.0 0.0 2.5508 0.0 0.0 0.0 487.2492242403926 487.2492242403926 7.580555584148456 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F} 2.5508 - 198 1 0.919 73537.5 1.0 12143 5735 17879 HBL1_DMSO_200M_050219_1,17880 HBL1_DMSO_200M_050219_1,17880,GIGHWVVAV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17881 85.48 155.0 560920.0 25 0 41353.0 + 1616 ALLSSLMNGLT 11 132 560.3095934402178 1118.6046339472357 2 560.3119994997978 MULTI CID FTMS 0 0 0 17879 436432.09375 0.969005255145866 1 -0.1354751586914062 2 Unmodified _ALLSSLMNGLT_ REV__ENSG00000160200|ENST00000398165|CBS;REV__ENST00000462349.5_1_21:44473992-44479496:-|nuORF;REV__nc|ENSG00000160200|P35520-2|CBS 29.081581746732265 0.4093582134107448 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AR[C(Carbamidomethyl (C))R]K{[QG]|[NA]} 9 -1 + 34.332 0.0 0.0 3.0691 3.0691 70.255 0.0 0.0 0.0 10.000700492505342 6.935749724493128 6.935749724493128 1.8962199591150293 0 0.0 1.2218487496163564 0.5 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AR[C(Carbamidomethyl (C))R]K{[QG]|[NA]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AR{I|L}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QG]|[NA]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{I|L}RA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QG]|[NA]};[{I|L}A]TVS[C(Carbamidomethyl (C))R]K{[QG]|[NA]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ARA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QG]|[NA]};[{I|L}A]TVS{I|L}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QG]|[NA]};[{I|L}A]MR[C(Carbamidomethyl (C))R]K{[QG]|[NA]};[{I|L}A]{I|L}SS[C(Carbamidomethyl (C))R]K{[QG]|[NA]};[{I|L}A]TVTVA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QG]|[NA]};[{I|L}A]{I|L}SS{I|L}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QG]|[NA]} 3.0691;2.8996;2.5643;2.1751;2.1378;2.0095;1.9374;1.8461;1.7249;1.6805 -;-;-;-;-;-;-;-;-;- 1211 1 0.919 73057.3 1.0 12144 5735 17879 HBL1_DMSO_200M_050219_1,17881 HBL1_DMSO_200M_050219_1,17881,ALLSSLMNGLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17882 85.481 48.0 881210.0 25 0 131580.0 + -1 IAYEQMGL 8 57 470.7263124699047 939.4380720066094 2 470.7265197634697 MULTI CID FTMS 0 0 0 17879 1436625.125 0.2950702047771125 13 -1.2917633056640625 3 Oxidation (M) _IAYEQM(Oxidation (M))GL_ REV__ENSG00000113360|ENST00000344624|DROSHA;REV__nc|ENSG00000113360|Q9NRR4-2|DROSHA;REV__nc|ENSG00000113360|Q9NRR4-4|DROSHA 21.74664581756881 0.5868176546531598 3 {I|L}A 2 -1 38.5 0.0 0.0 4.0982 0.0 0.0 0.0 752.2951226312304 752.2951226312304 19.5205343810445 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 {I|L}A 4.0982 + + 13 + 1 0.919 38744.0 1.0 12145 5735 17879 HBL1_DMSO_200M_050219_1,17882 HBL1_DMSO_200M_050219_1,17882,IAYEQMGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17883 85.483 42.0 842260.0 25 0 138380.0 + -1 ALLDFTCT 8 64 314.15321840409246 939.4378258124774 3 314.1530334353447 MULTI CID FTMS 0 0 0 17879 1140368.875 0.2982887751660231 13 -1.2917633056640625 4 Carbamidomethyl (C) _ALLDFTC(Carbamidomethyl (C))T_ REV__ENST00000219478.10_1_16:4800958-4801270:-|nuORF 6.723162845929126 0.7835230281555235 3 [{I|L}A]{I|L} 3 -1 30.458 0.0 0.0 3.2421 0.0 0.0 0.0 639.2102148767598 639.2102148767598 23.46787486224656 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]{I|L} 3.2421 + + 20 + 1 0.919 35099.5 1.0 12146 5735 17879 HBL1_DMSO_200M_050219_1,17883 HBL1_DMSO_200M_050219_1,17883,ALLDFTCT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17884 85.484 60.0 823450.0 25 0 102290.0 + 42523 VTLGPAPAPI 10 75 468.2811281796912 934.5477034261824 2 468.2811462283134 MULTI CID FTMS 0 0 0 17879 698468.375 1.0 0 0.0 5 Unmodified _VTLGPAPAPI_ REV__ENSG00000107159|ENST00000378357|CA9 20.453626601364224 0.5043500229302764 3 {[TV]|[{I|L}S]}V{I|L} 4 -1 45.445 0.0 0.0 4.8628 0.0 0.0 0.0 519.2559403931027 519.2559403931027 31.95046257204389 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[TV]|[{I|L}S]}V{I|L} 4.8628 - 112 + 1 0.919 43058.7 1.0 12147 5735 17879 HBL1_DMSO_200M_050219_1,17884 HBL1_DMSO_200M_050219_1,17884,VTLGPAPAPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17885 85.485 41.0 1136800.0 25 0 150470.0 + 9625 FLLSWYFSL 9 74 588.3111369747654 1174.6077210163307 2 588.3076660037041 MULTI CID FTMS 0 0 0 17879 856757.3125 1.0 0 0.0 6 Unmodified _FLLSWYFSL_ REV__ENSG00000143418|ENST00000368954|CERS2;REV__ENST00000482825.7_1_1:150939531-150940017:-|nuORF 11.640296217721598 0.521594087909532 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPD 5 -1 40.502 0.0 0.0 3.4481 0.0 0.0 0.0 602.304570391945 602.304570391945 16.05400981717458 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPD 3.4481 - 159 + 1 0.919 43099.4 1.0 12148 5735 17879 HBL1_DMSO_200M_050219_1,17885 HBL1_DMSO_200M_050219_1,17885,FLLSWYFSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17886 85.492 347.0 340820.0 25 0 91084.0 -1 LCAARLLRQRL 11 116 685.4110230289199 1368.8074931246397 2 685.4111816287041 MULTI CID FTMS 0 0 0 17879 556939.3125 0.6742374052469134 -3 0.2812652587890625 7 Carbamidomethyl (C) _LC(Carbamidomethyl (C))AARLLRQRL_ ENSG00000241360|ENST00000215904|PDXP 2.735195868890462 0.8622431031272658 3 {I|L}AA{M(Oxidation (M))|F} 4 -1 20.433 0.0 0.0 1.4928 0.0 0.0 684.4392766666218 279.14472376041255 963.5840004270344 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AA{M(Oxidation (M))|F} 1.4928 - 316 + 1 0.919 108873.3 1.0 12149 5735 17879 HBL1_DMSO_200M_050219_1,17886 HBL1_DMSO_200M_050219_1,17886,LCAARLLRQRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17887 85.493 78.0 1630500.0 25 0 138090.0 + -1 LSMYSDCT 8 121 488.6912563239962 975.3679597147924 2 488.6915466189384 MULTI CID FTMS 0 0 0 17879 518556.0625 1.0 0 0.0 8 Carbamidomethyl (C) _LSMYSDC(Carbamidomethyl (C))T_ REV__ENST00000539632.1_1_12:7636265-7637908:-|nuORF 13.50788311687929 0.7113601687236069 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DT[{M(Oxidation (M))|F}V] 8 -1 + 28.35 0.0 0.0 2.9066 2.9066 76.466 0.0 0.0 0.0 1.8526426316392983 5.049406363485858 1.8526426316392983 7.073425519714185 0 0.0 2.0 0.0 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DT[{M(Oxidation (M))|F}V];{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))C]{I|L}T[{M(Oxidation (M))|F}V];[YT]TD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SC(Carbamidomethyl (C)){[QS]|[NT]};[YT]TD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]AV;[YT]TD{[MS]|[{M(Oxidation (M))|F}A]}C(Carbamidomethyl (C))V;[YT]TD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]G{I|L};[YN]{[MS]|[{M(Oxidation (M))|F}A]}DT[{M(Oxidation (M))|F}V] 2.9066;2.1814;1.982;1.5943;1.1647;0.70053;0.65809;0.62275;0.27758 -;-;-;-;-;-;-;-;- 185 1 0.919 101525.7 1.0 12150 5735 17879 HBL1_DMSO_200M_050219_1,17887 HBL1_DMSO_200M_050219_1,17887,LSMYSDCT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17888 85.496 138.0 429040.0 25 0 64189.0 -1 0 71 657.3445568666086 1969.0118412000256 3 657.3437988162041 MULTI CID FTMS 0 0 0 17879 410088.0625 0.5703848993121731 3 -0.2879257202148437 9 3 [{I|L}T][NP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}G 8 -1 27.893 0.0 0.0 1.4166 0.0 0.0 0.0 1143.5241264197834 1143.5241264197834 -0.2105361031087227 0.0 -0.2105361031087227 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T][NP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}G 1.4166 - 130 + 1 0.919 52572.1 1.0 12151 5735 17879 HBL1_DMSO_200M_050219_1,17888 HBL1_DMSO_200M_050219_1,17888, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17889 85.498 76.0 1089400.0 25 0 105840.0 23554 LTLREVEVF 9 124 553.3174297305438 1104.6203065278876 2 553.3174316287041 MULTI CID FTMS 0 0 0 17879 407779.90625 1.0 0 0.0 10 Unmodified _LTLREVEVF_ ENSG00000060491|ENST00000290291|OGFR;nc|ENSG00000060491|Q9NZT2-2|OGFR 18.13498045792455 0.3457906370836843 3 {[VA]|[{I|L}G]}[PS]V{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F} 10 8 + 26.551 0.0 0.0 2.4037 2.4037 67.366 0.0 0.0 0.0 0.6926720723289108 7.352678516200797 0.6926720723289108 0.8416711198256657 0 0.4489700043360188 1.5228787452803376 0.0 0.0 {[VA]|[{I|L}G]}[PS]V{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F};[{I|L}P][VS]G{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F};[{I|L}P][SG]V{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[PS]V{I|L}YP{I|L}{M(Oxidation (M))|F};[{I|L}P][VS]G{I|L}YP{I|L}{M(Oxidation (M))|F};[{I|L}P][SG]V{I|L}YP{I|L}{M(Oxidation (M))|F};[DP][K{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F};[KP]EV{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F};[DP][K{I|L}]{I|L}YP{I|L}{M(Oxidation (M))|F};[KP]EV{I|L}YP{I|L}{M(Oxidation (M))|F} 2.4037;2.3275;2.3275;2.0434;1.9672;1.9672;1.8234;1.7709;1.4631;1.4106 -;-;-;-;-;-;-;-;-;- 465 1 0.919 68388.4 1.0 12152 5735 17879 HBL1_DMSO_200M_050219_1,17889 HBL1_DMSO_200M_050219_1,17889,LTLREVEVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17890 85.5 77.0 586960.0 25 0 57685.0 -1 LEFSDCYL 8 70 523.7310747514833 0 523.7308837771416 PEAK CID FTMS 0 0 0 17879 401100.40625 1.0 0 0.0 11 Carbamidomethyl (C) _LEFSDC(Carbamidomethyl (C))YL_ ENSG00000071205|ENST00000336498|ARHGAP10;ENSG00000079482|ENST00000355520|OPHN1;ENST00000510379.1_1_4:148653338-148778808:+|nuORF;nc|ENSG00000079482|O60890-2|OPHN1 10.183394434864962 0.5394990767616434 3 T 1 -1 10.797 0.0 0.0 1.0328 0.0 0.0 99.06920332385135 842.3081027947713 941.3773061186228 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T 1.0328 - 11 + 1 0.919 44789.0 1.0 12153 5735 17879 HBL1_DMSO_200M_050219_1,17890 HBL1_DMSO_200M_050219_1,17890,LEFSDCYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17891 85.509 532.0 318610.0 25 0 24033.0 + 22548 LPWPFRNKV 9 134 386.2258333005859 1155.6556705019575 3 386.2257568240166 MULTI CID FTMS 0 0 0 17879 365410.90625 0.2194598807000285 12 -1.214874267578125 12 Unmodified _LPWPFRNKV_ ENSG00000056558|ENST00000373887|TRAF1;nc|ENSG00000056558|Q13077-2|TRAF1 31.26834338654808 0.1333407332142048 3 {I|L}PVSV 5 6 50.573 0.0 0.0 4.3761 0.0 0.0 0.0 657.3493926000314 657.3493926000314 20.39590623023813 0.0 0.0 0.0 0 0.2614393726401688 1.3010299956639813 0.0 0.0 {I|L}PVSV 4.3761 - 638 + 1 0.919 143364.0 1.0 12154 5735 17879 HBL1_DMSO_200M_050219_1,17891 HBL1_DMSO_200M_050219_1,17891,LPWPFRNKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17892 85.518 529.0 561190.0 25 0 38925.0 + -1 LAEMEMSL 8 214 478.2091679885692 954.4037830439383 2 478.2091552615166 MULTI CID FTMS 0 0 0 17879 283916.1875 0.1367379679917027 49 -5.018035888671875 13 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 15.768221252438446 0.6779680726941459 3 [{I|L}A]A 3 -1 21.796 0.0 0.0 2.2837 0.0 0.0 0.0 696.222128264703 696.222128264703 1.207116239563895 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]A 2.2837 - 773 1 0.919 222438.6 1.0 12155 5735 17879 HBL1_DMSO_200M_050219_1,17892 HBL1_DMSO_200M_050219_1,17892,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17893 85.531 745.0 232580.0 25 0 13587.0 + 38970 TVPPAPATPT 10 168 317.8442058272296 0 317.8445007205009 PEAK CID FTMS 0 0 0 17879 203525.03125 1.0 0 0.0 14 Unmodified _TVPPAPATPT_ REV__ENST00000373148.5_1_1:36643158-36645856:+|nuORF;REV__nc|ENSG00000116871|Q3KQU3-3|MAP7D1 18.1463463914782 0.3130158145628772 3 T 1 -1 9.4897 0.0 0.0 1.4976 0.0 0.0 461.5522899730154 68.05140100650624 529.6036909795216 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 T 1.4976 + + 11 + 1 0.919 142368.7 1.0 12156 5735 17879 HBL1_DMSO_200M_050219_1,17893 HBL1_DMSO_200M_050219_1,17893,TVPPAPATPT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17894 85.541 575.0 334380.0 25 0 23419.0 + 44564 YPFEPPQI 8 194 495.75007820087126 989.4856034685424 2 495.7519103884697 MULTI CID FTMS 0 0 0 17879 190812.375 0.0669735650580715 7 -0.770416259765625 15 Unmodified _YPFEPPQI_ ENSG00000077152|ENST00000646651|UBE2T;ENST00000487227.5_1_1:202302298-202304891:-|nuORF 30.22481116460888 0.4082965392918993 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPPQ{I|L} 8 2 + 45.315 0.0 0.0 4.5797 4.5797 74.76 0.0 0.0 0.0 2.2847001269133926 16.40978057358332 2.2847001269133926 2.2847001269133926 0 0.0 0.8239087409443188 0.2742275032520141 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPPQ{I|L};{[QN]|[E{I|L}]|[KN]}MYPPQ{I|L};[TA][NS]YPPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EPYPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPP[AG]{I|L};{[QN]|[E{I|L}]|[KN]}MPYPQ{I|L};{[QN]|[E{I|L}]|[KN]}MYPP[AG]{I|L};[EP]{M(Oxidation (M))|F}YPPQ{I|L};[TA][NS]PYPQ{I|L};[TA][NS]YPP[AG]{I|L} 4.5797;4.3488;3.8384;3.7256;3.6436;3.4947;3.4127;3.326;2.9843;2.9078 -;-;-;-;-;-;-;-;-;- 977 1 0.919 145877.6 1.0 12157 5735 17879 HBL1_DMSO_200M_050219_1,17894 HBL1_DMSO_200M_050219_1,17894,YPFEPPQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17895 85.551 532.0 175190.0 25 0 9563.5 -1 0 113 1035.156039646472 0 1035.157153308392 PEAK CID FTMS 0 0 0 17879 171643.28125 0.7983671844986746 1 -0.1354751586914062 16 3 VS{I|L}[KC]{I|L}{M(Oxidation (M))|F} 7 -1 18.68 0.0 0.0 0.90318 0.0 0.0 1051.7837228945714 223.0729464166625 1274.856669311234 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.75 VS{I|L}[KC]{I|L}{M(Oxidation (M))|F} 0.90318 - 2221 + 1 0.919 67365.3 1.0 12158 5735 17879 HBL1_DMSO_200M_050219_1,17895 HBL1_DMSO_200M_050219_1,17895, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17896 85.566 780.0 197180.0 25 0 33555.0 + 18411 KVVEDIEYLKF 11 179 691.8812787479642 1381.7480045627285 2 692.3817626833916 MULTI CID FTMS 0 0 0 17879 156738.03125 1.0 0 0.0 17 Unmodified _KVVEDIEYLKF_ ENSG00000130414|ENST00000252711|NDUFA10;nc|ENSG00000130414|O95299-2|NDUFA10 60.899326713953855 0.0654953153043458 3 QDNEY{I|L}K{M(Oxidation (M))|F} 8 5 36.443 0.0 0.0 2.6375 0.0 0.0 326.2319690339685 0.0 326.2319690339685 0.0 6.292841131604874 0.0 0.0 0 1.110924374808178 0.0 0.0 0.6307196863200843 QDNEY{I|L}K{M(Oxidation (M))|F} 2.6375 - 3771 + 1 0.919 116591.9 1.0 12159 5735 17879 HBL1_DMSO_200M_050219_1,17896 HBL1_DMSO_200M_050219_1,17896,KVVEDIEYLKF True True KVVEDIEYLKF 85.565673 691.8807 4927563.5 17879.0 ENSG00000130414|ENST00000252711|NDUFA10;;nc|ENSG00000130414|O95299-2|NDUFA10 7.119138717651367 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17897 85.579 800.0 127240.0 25 0 13100.0 24517 MIPPVKLKWL 10 120 408.9221794976488 1223.7447090931464 3 408.9220764040947 MULTI CID FTMS 0 0 0 17879 126703.6484375 0.21710388998016 4 -0.4476089477539062 18 Unmodified _MIPPVKLKWL_ ENSG00000103657|ENST00000443617|HERC1;ENST00000559886.1_1_15:64045105-64067822:-|nuORF 0.6976657623105312 0.723409379185497 3 {I|L} 1 9 10.181 0.0 0.0 0.83196 0.0 0.0 1092.649370203301 0.0 1092.649370203301 0.0 3.1913608199120347 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.83196 + + 56 + 1 0.919 83418.8 0.8700000047683716 12160 5735 17879 HBL1_DMSO_200M_050219_1,17897 HBL1_DMSO_200M_050219_1,17897,MIPPVKLKWL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17898 85.594 800.0 189150.0 25 0 30522.0 17054 KLADGSYFGEI 11 162 400.5375910611264 0 400.5378600955009 PEAK CID FTMS 0 0 0 17879 123986.9609375 1.0 0 0.0 19 Unmodified _KLADGSYFGEI_ ENSG00000138622|ENST00000261917|HCN4 17.11289562659939 0.3845757490720307 3 D 1 10 5.4846 0.0 0.0 0.68637 0.0 0.0 59.74881385877786 621.2578219049436 681.0066357637215 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.68637 + + 43 + 1 0.919 118357.4 0.8500000238418579 12161 5735 17879 HBL1_DMSO_200M_050219_1,17898 HBL1_DMSO_200M_050219_1,17898,KLADGSYFGEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17899 85.608 800.0 205720.0 25 0 19490.0 -1 0 158 666.3408204525264 1996.000631957779 3 666.3409911990166 MULTI CID FTMS 0 0 0 17879 125462.1875 0.4041800951579309 -2 0.124847412109375 20 3 [H{I|L}][QP]V{[ET]|[MV]}YDG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]} 17 -1 + 78.308 0.0 0.0 3.9233 3.9233 52.323 0.0 0.0 0.0 6.020599913279625 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.0 0.3252574989159953 [H{I|L}][QP]V{[ET]|[MV]}YDG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]};[H{I|L}][QP]V{[ET]|[MV]}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K{[TV]|[{I|L}S]};[H{I|L}][NP]{I|L}{[ET]|[MV]}YDG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};[H{I|L}][NP]{I|L}{[ET]|[MV]}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{[ET]|[MV]}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{[ET]|[MV]}YDG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]};[H{I|L}][QP]{[QN]|[E{I|L}]|[KN]}SYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]};[H{I|L}][QP]{[QN]|[E{I|L}]|[KN]}SYDG{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};[H{I|L}][NP]QQSYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};[H{I|L}][NP]QQSYDG{M(Oxidation (M))|F}{I|L}H{I|L}K{[TV]|[{I|L}S]} 3.9233;3.9233;3.835;3.835;3.6216;3.6216;3.5731;3.5731;3.4849;3.4849 -;-;-;-;-;-;-;-;-;- 4015 1 0.919 129989.3 0.7699999809265137 12162 5735 17879 HBL1_DMSO_200M_050219_1,17899 HBL1_DMSO_200M_050219_1,17899, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17901 85.613 37.0 341730.0 25 0 43339.0 + -1 RKAYKCCGL 9 28 549.7817328041924 1097.5489126751847 2 549.7813598513603 MULTI CID FTMS 0 0 0 17900 314787.375 0.2684177119733874 3 -0.3121337890625 1 Carbamidomethyl (C) _RKAYKC(Carbamidomethyl (C))CGL_ REV__ENST00000554843.5_1_14:35761682-35780127:+|nuORF 2.302733041254933 0.8342969208511092 3 C{[VA]|[{I|L}G]} 3 -1 5.6864 0.0 0.0 0.5181 0.0 0.0 806.4262452941285 0.0 806.4262452941285 0.0 5.686362358410124 0.0 0.0 0 0.0 0.0 0.0 0.0 C{[VA]|[{I|L}G]} 0.5181 + + 5 + 1 0.919 19388.5 1.0 12163 5736 17900 HBL1_DMSO_200M_050219_1,17901 HBL1_DMSO_200M_050219_1,17901,RKAYKCCGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17902 85.625 711.0 174410.0 25 0 14823.0 + 24184 LYYNTITNF 9 179 574.7850219607353 0 574.7850219607353 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _LYYNTITNF_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 16.942295170755138 0.2326366549411506 3 {I|L}{M(Oxidation (M))|F} 2 7 11.083 0.0 0.0 0.96584 0.0 0.0 232.09885634589983 652.2871798150999 884.3860361609998 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 0.96584 - 704 + 1 0.919 99358.7 1.0 12164 5736 17900 HBL1_DMSO_200M_050219_1,17902 HBL1_DMSO_200M_050219_1,17902,LYYNTITNF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17903 85.627 84.0 883290.0 25 0 131330.0 + 1743 ALQFEDCL 8 100 469.71818474302745 937.4218165528548 2 469.7181884646416 MULTI CID FTMS 0 0 0 17900 1650874.625 1.0 0 0.0 3 Unmodified _ALQFEDCL_ REV__ENST00000513024.5_1_4:41700377-41700494:+|nuORF 11.114462752807354 0.7467182956244686 3 G{I|L} 2 -1 14.949 0.0 0.0 1.5946 0.0 0.0 749.3054205341034 0.0 749.3054205341034 0.0 2.1842903735120345 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L} 1.5946 - 73 + 1 0.919 66813.5 1.0 12165 5736 17900 HBL1_DMSO_200M_050219_1,17903 HBL1_DMSO_200M_050219_1,17903,ALQFEDCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17904 85.631 238.0 143820.0 25 0 18492.0 + 40101 VGKLTDIT 8 74 423.74974366499055 845.4849343967811 2 423.7502014040947 MULTI CID FTMS 0 0 0 17900 1290387.125 1.0 0 0.0 4 Unmodified _VGKLTDIT_ REV__ENSG00000163975|ENST00000296350|MELTF;REV__nc|ENSG00000163975|P08582-2|MELTF 2.889219685676258 0.8067950007271085 3 {I|L} 1 -1 11.42 0.0 0.0 1.3507 0.0 0.0 714.390129564553 0.0 714.390129564553 0.0 0.8240512432299596 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3507 + + 27 + 1 0.919 34001.4 1.0 12166 5736 17900 HBL1_DMSO_200M_050219_1,17904 HBL1_DMSO_200M_050219_1,17904,VGKLTDIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17905 85.632 24.0 1967400.0 25 0 321640.0 + -1 GMPDFLEKL 9 72 533.2683645240601 1064.52217611492 2 533.2684203982353 MULTI CID FTMS 0 0 0 17900 969982.4375 0.6745233984321045 -1 0.1354751586914062 5 Oxidation (M) _GM(Oxidation (M))PDFLEKL_ ENSG00000084090|ENST00000337288|STARD7 14.40537977576856 0.4467465336100671 3 {[CT]|[{M(Oxidation (M))|F}G]}PD{M(Oxidation (M))|F}{I|L}EK{I|L} 9 -1 + 31.257 0.0 0.0 2.9363 2.9363 76.974 0.0 0.0 0.0 7.147642715192507 9.6682129807985 7.147642715192507 7.730012720637376 0 0.4247425010840047 0.0 0.0 0.0 {[CT]|[{M(Oxidation (M))|F}G]}PD{M(Oxidation (M))|F}{I|L}EK{I|L};{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[MD]{I|L}EK{I|L};[DP]{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{[DA]|[EG]};[DP]{M(Oxidation (M))|F}{I|L}[YK]P{[DA]|[EG]};{[CT]|[{M(Oxidation (M))|F}G]}P[YR]M[VP]V;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[R{M(Oxidation (M))|F}]M[VP]V;{[QN]|[E{I|L}]|[KN]}{[ET]|[MV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{[DA]|[EG]};{[QN]|[E{I|L}]|[KN]}{[ET]|[MV]}[YK]P{[DA]|[EG]} 2.9363;2.2101;2.0281;1.7238;1.2127;1.0473;0.38402;0.079748 +;-;-;-;-;-;-;- + 138 + 1 0.919 43928.5 1.0 12167 5736 17900 HBL1_DMSO_200M_050219_1,17905 HBL1_DMSO_200M_050219_1,17905,GMPDFLEKL False False GMPDFLEKL 85.632387 533.268420398235 13835550.0 17900.0 ENSG00000084090|ENST00000337288|STARD7 5.305187702178955 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17906 85.634 87.0 504220.0 25 0 41486.0 + -1 NLMDPLKSV 9 88 516.7715682129308 1031.5285834926617 2 516.7716552615166 MULTI CID FTMS 0 0 0 17900 861663.25 1.0 0 0.0 6 Oxidation (M) _NLM(Oxidation (M))DPLKSV_ REV__ENSG00000144028|ENST00000323853|SNRNP200 12.531546534597751 0.4974689918368763 3 SV 2 -1 17.083 0.0 0.0 1.6561 0.0 0.0 827.4171313215662 0.0 827.4171313215662 0.0 4.86469263144178 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 SV 1.6561 + + 86 + 1 0.919 41352.2 1.0 12168 5736 17900 HBL1_DMSO_200M_050219_1,17906 HBL1_DMSO_200M_050219_1,17906,NLMDPLKSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17907 85.64 332.0 99174.0 25 0 7186.2 6974 EEIKFLKKLQK 11 71 702.4373633311609 1402.8601737291217 2 702.4380981326103 MULTI CID FTMS 0 0 0 17900 757580.5625 1.0 0 0.0 7 Unmodified _EEIKFLKKLQK_ ENSG00000214954|ENST00000448384|LRRC69 5.731851221503515 0.8481046878870278 3 EE{I|L}{I|L}S 5 7 34.635 0.0 0.0 2.4689 0.0 0.0 0.0 828.5476486649217 828.5476486649217 10.45371572735597 0.0 0.0 0.0 0 0.0 0.0 1.4802046884880935 0.0 EE{I|L}{I|L}S 2.4689 - 169 1 0.919 32327.8 1.0 12169 5736 17900 HBL1_DMSO_200M_050219_1,17907 HBL1_DMSO_200M_050219_1,17907,EEIKFLKKLQK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17908 85.642 69.0 578780.0 25 0 72700.0 + 22002 LPPPPMQYI 9 78 528.2826865253334 1054.5508201174666 2 528.2834350466728 MULTI CID FTMS 0 0 0 17900 553473.25 0.8564167632148515 8 -0.8394088745117188 8 Unmodified _LPPPPMQYI_ ENSG00000155868|ENST00000286317|MED7 34.18733598223924 0.1073653526364521 3 [{I|L}P][YK]MQY{I|L} 8 3 + 34.543 0.0 0.0 3.2756 3.2756 76.758 0.0 0.0 0.0 6.690067809585756 7.914478256039672 6.690067809585756 6.690067809585756 0 0.7429928190999391 1.5228787452803376 0.0 0.0 [{I|L}P][YK]MQY{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}MQY{I|L};[{I|L}P][HV]WQY{I|L};[{I|L}P][YK]M[AG]Y{I|L};{I|L}{I|L}[YG]WQY{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M[AG]Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[VG]T{I|L};[{I|L}P][HV]W[AG]Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}A][VS];{I|L}{I|L}[YG]W[AG]Y{I|L} 3.2756;2.6412;2.5377;2.3973;1.9033;1.7629;1.6712;1.6594;1.1752;1.025 -;-;-;-;-;-;-;-;-;- 119 1 0.919 38157.3 1.0 12170 5736 17900 HBL1_DMSO_200M_050219_1,17908 HBL1_DMSO_200M_050219_1,17908,LPPPPMQYI True True LPPPPMQYI 85.642012 528.2842 5209932.0 17900.0 ENSG00000155868|ENST00000286317|MED7 3.759727319081625 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17909 85.65 437.0 521490.0 25 0 60429.0 + 6282 DVAPYLRKLRR 11 152 693.9227313020705 1385.8309096709409 2 693.9253417849541 MULTI CID FTMS 0 0 0 17900 473522.25 1.0 0 0.0 9 Unmodified _DVAPYLRKLRR_ REV__ENSG00000010017|ENST00000011619|RANBP9 2.9952420565917617 0.861016188266951 3 [PS]{I|L}P{I|L}SV 7 -1 55.088 0.0 0.0 3.9751 0.0 0.0 0.0 689.4007698606471 689.4007698606471 26.10710895460604 0.0 0.0 0.0 0 0.2742275032520141 1.0457574905606752 1.8912939259328767 0.0 [PS]{I|L}P{I|L}SV 3.9751 - 1554 1 0.919 174839.3 1.0 12171 5736 17900 HBL1_DMSO_200M_050219_1,17909 HBL1_DMSO_200M_050219_1,17909,DVAPYLRKLRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17910 85.651 66.0 1144100.0 25 0 154950.0 + 43704 YAYLPLHV 8 101 488.26737169272167 974.5201904522434 2 488.2674438357353 MULTI CID FTMS 0 0 0 17900 438473.75 0.6465641023372443 -2 0.1756820678710937 10 Unmodified _YAYLPLHV_ ENSG00000119599|ENST00000358377|DCAF4;nc|ENSG00000119599|Q8WV16-2|DCAF4;nc|ENSG00000119599|Q8WV16-3|DCAF4;nc|ENSG00000119599|Q8WV16-4|DCAF4;nc|ENSG00000119599|Q8WV16-5|DCAF4 52.33426049586781 0.1282678332820461 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}P{I|L}HV 8 0 + 60.17 0.0 0.0 6.1743 6.1743 90.714 0.0 0.0 0.0 44.654080838384 11.8943306386236 11.8943306386236 16.486648860246227 0 0.805462187404089 2.0 0.0 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}P{I|L}HV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}P[HV]{I|L};[PA][KA]P{I|L}Y{[ES]|[DT]|[{I|L}C]} 6.1743;4.4826;1.5039 +;-;- + 99 + 1 0.919 62064.1 1.0 12172 5736 17900 HBL1_DMSO_200M_050219_1,17910 HBL1_DMSO_200M_050219_1,17910,YAYLPLHV False True YAYLPLHV 85.651383 488.267443835735 40491708.0 17900.0 nc|ENSG00000119599|Q8WV16-2|DCAF4;;nc|ENSG00000119599|Q8WV16-5|DCAF4;;nc|ENSG00000119599|Q8WV16-3|DCAF4;;ENSG00000119599|ENST00000358377|DCAF4;;nc|ENSG00000119599|Q8WV16-4|DCAF4 8.37288490931193 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17911 85.66 489.0 82923.0 25 0 5911.0 34302 SLRKKRPLFP 10 79 621.3933327353593 0 621.3932372927666 PEAK CID FTMS 0 0 0 17900 403628.125 1.0 0 0.0 11 Unmodified _SLRKKRPLFP_ ENSG00000125779|ENST00000610179|PANK2;nc|ENSG00000125779|Q9BZ23-3|PANK2;nc|ENSG00000125779|Q9BZ23|PANK2;PANK2|p.P376Tfs*3|1|0.41|ENSG00000125779|chr20:3910719-3910720|-/A|frameshift_variant 3.944395688203298 0.3961065659209837 3 MSAMD 5 10 25.79 0.0 0.0 2.0785 0.0 0.0 620.5099187892748 82.06692682437733 702.5768456136522 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 MSAMD 2.0785 - 57 + 1 0.919 35186.1 1.0 12173 5736 17900 HBL1_DMSO_200M_050219_1,17911 HBL1_DMSO_200M_050219_1,17911,SLRKKRPLFP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17912 85.661 45.0 712630.0 25 0 79758.0 + 27908 PLSTETHISL 10 64 549.2977017541791 1096.580850575158 2 549.2978393435478 MULTI CID FTMS 0 0 0 17900 389291.03125 1.0 0 0.0 12 Unmodified _PLSTETHISL_ ENSG00000253159|ENST00000252085|PCDHGA12;ENSG00000262576|ENST00000571252|PCDHGA4;nc|ENSG00000253159|O60330-2|PCDHGA12;nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4 10.823927491677226 0.6659270209832991 3 TV 2 9 17.232 0.0 0.0 1.5714 0.0 0.0 878.4542311677347 0.0 878.4542311677347 0.0 5.242275032520141 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 TV 1.5714 - 45 + 1 0.919 35344.5 1.0 12174 5736 17900 HBL1_DMSO_200M_050219_1,17912 HBL1_DMSO_200M_050219_1,17912,PLSTETHISL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17913 85.667 264.0 210910.0 25 0 18235.0 + 10763 FYLNNSVMEY 10 91 640.2863293996842 1278.5581058661685 2 640.2871581912041 MULTI CID FTMS 0 0 0 17900 266629.25 1.0 0 0.0 13 Unmodified _FYLNNSVMEY_ ENSG00000134480|ENST00000256897|CCNH;ENST00000505230.1_1_5:86705105-86708611:-|nuORF;ENST00000510020.5_1_5:86704942-86708611:-|nuORF 32.30548876998284 0.2428506522065767 3 EY 2 8 21.454 0.0 0.0 1.678 0.0 0.0 968.4430678796432 0.0 968.4430678796432 0.0 9.670913577551785 0.0 0.0 0 0.0 0.0 0.5 0.0 + EY 1.678 + + 157 + 1 0.919 47319.3 1.0 12175 5736 17900 HBL1_DMSO_200M_050219_1,17913 HBL1_DMSO_200M_050219_1,17913,FYLNNSVMEY False True FYLNNSVMEY 85.667352 640.287158191204 3034355.25 17900.0 ENST00000510020.5_1_5:86704942-86708611:-|nuORF;;ENSG00000134480|ENST00000256897|CCNH;;ENST00000505230.1_1_5:86705105-86708611:-|nuORF 3.374633232752482 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17914 85.67 147.0 355320.0 25 0 42411.0 + 42786 VVISSDGQFAL 11 74 568.3032507927411 1134.591948652282 2 568.3050414919853 MULTI CID FTMS 0 0 0 17900 221176.640625 0.0327671645779467 10 -1.0309371948242188 14 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 13.90604991867851 0.7458848613461305 3 {[DA]|[EG]}{I|L}P 4 9 24.922 0.0 0.0 2.1965 0.0 0.0 0.0 735.3778732951133 735.3778732951133 0.7403126772771884 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[DA]|[EG]}{I|L}P 2.1965 - 59 1 0.919 46716.6 1.0 12176 5736 17900 HBL1_DMSO_200M_050219_1,17914 HBL1_DMSO_200M_050219_1,17914,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17915 85.68 563.0 502700.0 25 0 57559.0 + 7799 ELIGNFVRV 9 199 523.8030725277778 1045.5915921223557 2 523.8027831912041 MULTI CID FTMS 0 0 0 17900 168359.875 0.6233625284041308 -2 0.1756820678710937 15 Unmodified _ELIGNFVRV_ ENSG00000136940|ENST00000259467|PDCL;nc|ENSG00000136940|Q13371-2|PDCL 68.08070601005525 0.0218408846571049 3 {[QN]|[E{I|L}]|[KN]}{I|L}GN{M(Oxidation (M))|F}VRV 9 0 + 82.713 0.0 0.0 7.9107 7.9107 91.573 0.0 0.0 0.0 27.147642715192504 8.260748027008276 8.260748027008276 8.260748027008276 0 0.805462187404089 2.0 0.0 1.0044321917401078 + + {[QN]|[E{I|L}]|[KN]}{I|L}GN{M(Oxidation (M))|F}VRV;{[QN]|[E{I|L}]|[KN]}{I|L}GN{M(Oxidation (M))|F}VVR;{[QN]|[E{I|L}]|[KN]}VAN{M(Oxidation (M))|F}VRV;{[QN]|[E{I|L}]|[KN]}{I|L}GGG{M(Oxidation (M))|F}VRV;{[QN]|[E{I|L}]|[KN]}VAN{M(Oxidation (M))|F}VVR;{[QN]|[E{I|L}]|[KN]}{I|L}GGG{M(Oxidation (M))|F}VVR;{[QN]|[E{I|L}]|[KN]}VAGG{M(Oxidation (M))|F}VRV;{[QN]|[E{I|L}]|[KN]}{I|L}GN{M(Oxidation (M))|F}Q{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}VAGG{M(Oxidation (M))|F}VVR;{[QN]|[E{I|L}]|[KN]}VAN{M(Oxidation (M))|F}Q{I|L}{I|L} 7.9107;7.1206;7.0902;7.03;6.3002;6.2399;6.2096;5.7983;5.4195;4.9779 +;-;-;-;-;-;-;-;-;- + 1121 + 1 0.919 219292.3 1.0 12177 5736 17900 HBL1_DMSO_200M_050219_1,17915 HBL1_DMSO_200M_050219_1,17915,ELIGNFVRV True True ELIGNFVRV 85.680175 523.802783191204 1645761.75 17900.0 ENSG00000136940|ENST00000259467|PDCL;;nc|ENSG00000136940|Q13371-2|PDCL 6.119822502136231 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17916 85.689 513.0 95080.0 25 0 5145.1 19381 LERLQHIIQRR 11 105 731.4404242506095 1460.8662955680188 2 731.4411498904228 MULTI CID FTMS 0 0 0 17900 167317.65625 1.0 0 0.0 16 Unmodified _LERLQHIIQRR_ ENSG00000174799|ENST00000257287|CEP135 1.3295316138638542 0.8688751186870782 3 {I|L} 1 10 11.109 0.0 0.0 0.76046 0.0 0.0 1329.7714907357906 0.0 1329.7714907357906 0.0 0.7306401783911909 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.76046 + + 163 + 1 0.919 42844.2 1.0 12178 5736 17900 HBL1_DMSO_200M_050219_1,17916 HBL1_DMSO_200M_050219_1,17916,LERLQHIIQRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17917 85.7 594.0 281060.0 25 0 25376.0 -1 MCHNDDSL 8 198 496.6769726473378 0 496.6763183474541 PEAK CID FTMS 0 0 0 17900 168978.5 1.0 0 0.0 17 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))CHNDDSL_ ENST00000431268.5_1_1:173835814-173835856:-|nuORF 5.760428011301431 0.5786759180849727 3 P{M(Oxidation (M))|F}K 3 -1 8.4164 0.0 0.0 0.84899 0.0 0.0 162.88113016586516 453.2182830061108 616.099413171976 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F}K 0.84899 - 294 + 1 0.919 127688.1 1.0 12179 5736 17900 HBL1_DMSO_200M_050219_1,17917 HBL1_DMSO_200M_050219_1,17917,MCHNDDSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17918 85.705 275.0 206940.0 25 0 35201.0 + 16601 KDVPLISV 8 87 435.7682466613643 0 435.7682983279228 PEAK CID FTMS 0 0 0 17900 158145.921875 1.0 0 0.0 18 Unmodified _KDVPLISV_ REV__ENST00000370500.9_1_1:89323107-89325618:-|nuORF 13.50788311687929 0.5021269579892848 3 R{I|L}G[EP]GD 7 -1 10.767 0.0 0.0 1.2383 0.0 0.0 74.1145169765012 68.05134760074452 142.1658645772457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 R{I|L}G[EP]GD 1.2383 - 73 + 1 0.919 48998.6 1.0 12180 5736 17900 HBL1_DMSO_200M_050219_1,17918 HBL1_DMSO_200M_050219_1,17918,KDVPLISV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17919 85.715 530.0 94043.0 25 0 7726.7 + -1 QVRCGLRRRRA 11 98 714.4138510312453 1426.8131491292904 2 714.4178954958916 MULTI CID FTMS 0 0 0 17900 130072.3671875 0.7930874675581904 1 -0.1127700805664062 19 Carbamidomethyl (C) _QVRC(Carbamidomethyl (C))GLRRRRA_ REV__ENSG00000188566|ENST00000684003|NDOR1;REV__nc|ENSG00000188566|Q9UHB4-2|NDOR1;REV__nc|ENSG00000188566|Q9UHB4-3|NDOR1;REV__nc|ENSG00000188566|Q9UHB4-4|NDOR1 5.296884461304476 0.8501568894076437 3 {I|L} 1 -1 10.837 0.0 0.0 0.75956 0.0 0.0 1295.718268003117 0.0 1295.718268003117 0.0 1.2333616667069425 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.75956 + + 111 + 1 0.919 42983.3 1.0 12181 5736 17900 HBL1_DMSO_200M_050219_1,17919 HBL1_DMSO_200M_050219_1,17919,QVRCGLRRRRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17920 85.721 318.0 369350.0 25 0 33602.0 41755 VPTSGRMH 8 145 442.7238179071466 883.4330828810932 2 442.7246581912041 MULTI CID FTMS 0 0 0 17900 133544.0 0.9251762359573852 -2 0.1756820678710937 20 Unmodified _VPTSGRMH_ ENSG00000184611|ENST00000332142|KCNH7 11.640296217721598 0.738950129755968 3 [{I|L}A]S{NN|[MP]|[D{I|L}]|[EV]}S{I|L} 7 7 28.178 0.0 0.0 3.1895 0.0 0.0 0.0 181.05025773167645 181.05025773167645 2.9609817879939726 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 [{I|L}A]S{NN|[MP]|[D{I|L}]|[EV]}S{I|L} 3.1895 - 498 1 0.919 94193.4 1.0 12182 5736 17900 HBL1_DMSO_200M_050219_1,17920 HBL1_DMSO_200M_050219_1,17920,VPTSGRMH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17922 85.725 8.2 4539800.0 25 0 701010.0 18688 LAIWEASL 8 61 451.75254133747273 901.4905297417456 2 451.7530090212822 MULTI CID FTMS 0 0 0 17921 6844359.0 0.2933497281685573 6 -0.5676651000976562 1 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 28.17323086031832 0.4514957916281387 3 [{I|L}A][WE]S{I|L}A{I|L} 8 4 + 46.132 0.0 0.0 5.1173 5.1173 80.152 0.0 0.0 0.0 10.72559982972642 19.42471268044436 10.72559982972642 4.771212547196626 0 0.6989700043360187 2.0 0.4247425010840047 0.0 [{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[{I|L}A][WE]SVVV;[{I|L}A]{[WT]|[RM]}DVVV;[{I|L}A]{[ES]|[DT]|[{I|L}C]}[W{I|L}]A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}{[RE]|[WV]}VV 5.1173;4.588;4.1452;3.616;2.5662;1.5941 -;-;-;-;-;- 67 1 0.936 39403.6 1.0 12183 5737 17921 HBL1_DMSO_200M_050219_1,17922 HBL1_DMSO_200M_050219_1,17922,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17923 85.726 18.0 2842000.0 25 0 437290.0 + 39054 TVVIGGVVAV 10 86 457.28944756824814 912.5643422032964 2 457.2900573611259 MULTI CID FTMS 0 0 0 17921 1524914.75 0.2153092974481386 1 -0.0396804809570312 2 Unmodified _TVVIGGVVAV_ nc|ENSG00000165949|P40305-1|IFI27 20.453626601364224 0.5043500229302764 3 {[TV]|[{I|L}S]}V 3 7 18.416 0.0 0.0 2.0181 0.0 0.0 0.0 610.3563398441744 610.3563398441744 -0.4575749056067479 0.0 -0.4575749056067479 0.0 0 0.0 1.3979400086720375 0.0 0.0 + {[TV]|[{I|L}S]}V 2.0181 + + 105 1 0.936 42495.6 1.0 12184 5737 17921 HBL1_DMSO_200M_050219_1,17923 HBL1_DMSO_200M_050219_1,17923,TVVIGGVVAV False False TVVIGGVVAV 85.726495 457.290057361126 88947360.0 17921.0 nc|ENSG00000165949|P40305-1|IFI27 3.154587984085083 2.0 True 10.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17924 85.728 12.0 3840000.0 25 0 438890.0 + 39407 VALDKVIEI 9 72 500.3080371982834 998.6015214633668 2 500.3083373904228 MULTI CID FTMS 0 0 0 17921 5095605.0 1.0 0 0.0 3 Unmodified _VALDKVIEI_ ENSG00000119326|ENST00000325551|CTNNAL1;nc|ENSG00000119326|Q9UBT7-2|CTNNAL1;nc|ENSG00000119326|Q9UBT7-3|CTNNAL1 43.77239144664712 0.0547478964384323 3 VA{I|L}{M(Oxidation (M))|F}{I|L}V{I|L}DG 9 4 80.092 0.0 0.0 8.0204 0.0 0.0 0.0 68.0514391534789 68.0514391534789 42.25177236951588 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.2302046884880935 0.0 VA{I|L}{M(Oxidation (M))|F}{I|L}V{I|L}DG 8.0204 - 1304 + 1 0.936 40506.3 1.0 12185 5737 17921 HBL1_DMSO_200M_050219_1,17924 HBL1_DMSO_200M_050219_1,17924,VALDKVIEI True True VALDKVIEI 85.727674 500.308337390423 41314428.0 17921.0 nc|ENSG00000119326|Q9UBT7-2|CTNNAL1;;ENSG00000119326|ENST00000325551|CTNNAL1;;nc|ENSG00000119326|Q9UBT7-3|CTNNAL1 2.583205143610636 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17925 85.729 14.0 3849900.0 25 0 246630.0 + 16863 KIFDEILVNA 10 88 581.329401324827 1160.644249716454 2 581.3298828005791 MULTI CID FTMS 0 0 0 17921 3343657.75 0.2214517695701541 3 -0.2956390380859375 4 Unmodified _KIFDEILVNA_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant 33.4449034751529 0.2267874087365337 3 {[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}{I|L}K{I|L}V{[QG]|[NA]} 10 4 + 58.249 0.0 0.0 5.0187 5.0187 77.375 0.0 0.0 0.0 4.884381005764311 36.33803120088516 4.884381005764311 3.0102999566398125 0 1.0 0.0 0.7614393726401688 0.0 {[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}{I|L}K{I|L}V{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}K{I|L}{I|L}V{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}D{I|L}{M(Oxidation (M))|F}K{I|L}V{[QG]|[NA]};[{I|L}V][YQ]E{I|L}{I|L}V{[QG]|[NA]};[{I|L}V]EE{M(Oxidation (M))|F}K{I|L}V{[QG]|[NA]};{[NV]|[RG]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}K{I|L}V{[QG]|[NA]};{[CT]|[{M(Oxidation (M))|F}G]}{[WN]|[YH]}{I|L}K{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};[{I|L}V]{[QN]|[E{I|L}]|[KN]}[YQ]{I|L}V{[QG]|[NA]};{[CT]|[{M(Oxidation (M))|F}G]}{[WN]|[YH]}K{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[NV]|[RG]}[YQ]{I|L}K{I|L}{[{M(Oxidation (M))|F}H]|[RQ]} 5.0187;4.7593;4.5;3.9697;3.9697;3.2955;2.5172;2.4042;2.2578;2.1646 -;-;-;-;-;-;-;-;-;- 392 1 0.936 50294.7 1.0 12186 5737 17921 HBL1_DMSO_200M_050219_1,17925 HBL1_DMSO_200M_050219_1,17925,KIFDEILVNA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17926 85.733 203.0 828700.0 25 0 237000.0 -1 0 72 1076.1353725043923 3225.384288113377 3 1076.470996081829 MULTI CID FTMS 0 0 0 17921 1671629.25 0.985857518038316 1 -0.0396804809570312 5 3 {M(Oxidation (M))|F}GYW 4 -1 15.918 0.0 0.0 0.49351 0.0 0.0 1506.4986202440398 1162.6257208585787 2669.1243411026185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}GYW 0.49351 - 151 + 1 0.936 156117.0 1.0 12187 5737 17921 HBL1_DMSO_200M_050219_1,17926 HBL1_DMSO_200M_050219_1,17926, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17927 85.734 22.0 3548300.0 25 0 377600.0 1984 ANMKVWLF 8 92 504.77089226531297 1007.527231597426 2 504.7704040408134 MULTI CID FTMS 0 0 0 17921 1696759.0 0.9250925070562294 -1 0.1127700805664062 6 Unmodified _ANMKVWLF_ ENSG00000111684|ENST00000261407|LPCAT3;nc|ENSG00000111684|Q6P1A2-2|LPCAT3 16.942295170755138 0.6606234159769251 3 {[QG]|[NA]}MGS{M(Oxidation (M))|F}{I|L}[R{I|L}] 9 5 + 65.934 0.0 0.0 6.5442 6.5442 92.783 0.0 0.0 0.0 48.58909969916561 10.954839578393347 10.954839578393347 25.10574239612792 0 0.8494850021680094 0.8860566476931632 0.2887254899964357 0.3807196863200844 {[QG]|[NA]}MGS{M(Oxidation (M))|F}{I|L}[R{I|L}];{[QG]|[NA]}M[YQ]{I|L}[R{I|L}];{[QG]|[NA]}M{I|L}[YQ][R{I|L}];{[QG]|[NA]}[YV]C(Carbamidomethyl (C)){I|L}[R{I|L}];{[QG]|[NA]}{I|L}M[YQ][R{I|L}];{[QG]|[NA]}M{I|L}[HA][RP]V;{[QG]|[NA]}[YV][CG]{I|L}[R{I|L}];{[QG]|[NA]}[YV][WR]TV;{[QG]|[NA]}{I|L}M[HA][RP]V;[WR]S[YQ][R{I|L}] 6.5442;4.0523;3.3757;3.1079;2.73;2.6488;2.1886;2.0622;2.0031;0.24458 -;-;-;-;-;-;-;-;-;- 156 + 1 0.936 62403.5 1.0 12188 5737 17921 HBL1_DMSO_200M_050219_1,17927 HBL1_DMSO_200M_050219_1,17927,ANMKVWLF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17928 85.735 39.0 2579000.0 25 0 205580.0 + 10187 FQDPVPLTV 9 104 508.2764909113976 1014.5384288895953 2 508.2768127322197 MULTI CID FTMS 0 0 0 17921 1393588.0 0.3951159270217207 1 -0.0396804809570312 7 Unmodified _FQDPVPLTV_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 57.72198328787511 0.0273433238377839 3 [{I|L}P]T{M(Oxidation (M))|F}QP{I|L}TV 9 5 + 60.454 0.0 0.0 5.9587 5.9587 80.977 0.0 0.0 0.0 3.0406819984605704 9.335295873671754 3.0406819984605704 3.0406819984605704 0 1.0994850021680094 1.5228787452803376 0.3807196863200844 0.0 [{I|L}P]T{M(Oxidation (M))|F}QP{I|L}TV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DPVP{I|L}TV;[{I|L}P]T{M(Oxidation (M))|F}[AG]P{I|L}TV;{[TV]|[{I|L}S]}[CS]PVP{I|L}TV;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}PVP{I|L}TV;[{I|L}T]P{M(Oxidation (M))|F}QP{I|L}TV;[VP]DQ{M(Oxidation (M))|F}P{I|L}TV;[{I|L}P][DN]{M(Oxidation (M))|F}P{I|L}TV;[VP]D{M(Oxidation (M))|F}QP{I|L}TV;{[QN]|[E{I|L}]|[KN]}[MN]VP{I|L}TV 5.9587;5.659;5.0511;4.7671;4.745;4.6225;4.083;4.0716;4.0434;3.7435 -;+;-;-;-;-;-;-;-;- + 783 1 0.936 82441.8 1.0 12189 5737 17921 HBL1_DMSO_200M_050219_1,17928 HBL1_DMSO_200M_050219_1,17928,FQDPVPLTV True True FQDPVPLTV 85.735122 508.27681273222 66671862.0 17921.0 nc|ENSG00000122779|O15164-2|TRIM24;;ENSG00000122779|ENST00000343526|TRIM24 6.71758508682251 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17929 85.737 57.0 1620300.0 25 0 181950.0 + 12864 GVVPQLVKL 9 98 476.8130743891318 951.6115958450636 2 476.8133727908134 MULTI CID FTMS 0 0 0 17921 1340249.125 0.02237654292646 11 -1.04351806640625 8 Unmodified _GVVPQLVKL_ ENSG00000182481|ENST00000330459|KPNA2 39.957323273325 0.0756908302845263 3 [VG]VPQ{I|L}VK{I|L} 9 0 + 68.867 0.0 0.0 7.2369 7.2369 89.404 0.0 0.0 0.0 24.13734275855269 7.403626894942441 7.403626894942441 7.403626894942441 0 0.805462187404089 2.0 0.0 0.0 + + [VG]VPQ{I|L}VK{I|L};[VG]VPQ{I|L}V{I|L}K;[VG]VP[AG]{I|L}VK{I|L};[VG]V{I|L}[QP]VK{I|L};[VG]VP[AG]{I|L}V{I|L}K;[VG]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}PK{I|L};[VG]V{I|L}[QP]V{I|L}K;[VG]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}K 7.2369;6.4588;6.2692;5.5828;5.4912;5.2665;4.8048;4.4884 +;-;-;-;-;-;-;- + 253 + 1 0.936 76611.5 1.0 12190 5737 17921 HBL1_DMSO_200M_050219_1,17929 HBL1_DMSO_200M_050219_1,17929,GVVPQLVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17930 85.738 45.0 1397000.0 25 0 232170.0 + 34234 SLPPSIVL 8 71 413.2575590407292 824.5005651482584 2 413.2575866580009 MULTI CID FTMS 0 0 0 17921 1323864.875 0.438248853265581 1 -0.0396804809570312 9 Unmodified _SLPPSIVL_ ENSG00000057468|ENST00000263187|MSH4 56.541270873467816 0.1144128637334507 3 [PS]{I|L}PS{I|L}V{I|L} 8 2 + 64.759 0.0 0.0 7.8544 7.8544 86.413 0.0 0.0 0.0 16.29416157934763 10.172203223519531 10.172203223519531 3.2390874094431865 0 0.8182503180159344 1.5228787452803376 1.548455006504028 0.0 [PS]{I|L}PS{I|L}V{I|L};[PS]{I|L}P{I|L}SV{I|L};[PS]{I|L}{I|L}PSV{I|L};[TP]VPS{I|L}V{I|L};[TP]VP{I|L}SV{I|L};[TP]PVS{I|L}V{I|L};{[TV]|[{I|L}S]}PPS{I|L}V{I|L};[TP]PV{I|L}SV{I|L};{[TV]|[{I|L}S]}PP{I|L}SV{I|L};[PS][TP]V{I|L}V{I|L} 7.8544;7.4615;6.2812;5.8781;5.4853;5.4837;5.3732;5.0908;4.9803;4.5466 -;-;-;-;-;-;+;-;-;- + 368 1 0.936 60963.0 1.0 12191 5737 17921 HBL1_DMSO_200M_050219_1,17930 HBL1_DMSO_200M_050219_1,17930,SLPPSIVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17931 85.739 50.0 2896200.0 25 0 287270.0 + 42526 VTLGPVPEI 9 113 462.7729632992287 923.5313736652574 2 462.7736999392509 MULTI CID FTMS 0 0 0 17921 908020.875 0.3378706840849635 1 -0.0396804809570312 10 Unmodified _VTLGPVPEI_ ENSG00000117395|ENST00000236051|EBNA1BP2;ENST00000472982.5_1_1:43637061-43637789:-|nuORF 50.855029805455786 0.0384952370514206 3 [EP]{I|L}KV 5 7 42.479 0.0 0.0 4.5997 0.0 0.0 0.0 354.1645883471512 354.1645883471512 15.555847141874892 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.8807196863200843 0.0 [EP]{I|L}KV 4.5997 - 370 1 0.936 113532.4 1.0 12192 5737 17921 HBL1_DMSO_200M_050219_1,17931 HBL1_DMSO_200M_050219_1,17931,VTLGPVPEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17932 85.74 33.0 4081400.0 25 0 681920.0 + 4649 DAYVLPKLY 9 112 541.2999781941046 1080.585403455009 2 541.3006469607353 MULTI CID FTMS 0 0 0 17921 885072.1875 0.0031265482658278 28 -2.8195953369140625 11 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 58.6788170122104 0.0268135626297836 3 {[DA]|[EG]}YV{I|L}PK{I|L}Y 9 0 + 72.387 0.0 0.0 6.6989 6.6989 85.413 0.0 0.0 0.0 19.181212380090216 4.771212547196626 4.771212547196626 4.771212547196626 0 1.555462187404089 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L}Y;{[DA]|[EG]}YV{I|L}PKY{I|L} 6.6989;6.2574 +;- + 277 + 1 0.936 109612.2 1.0 12193 5737 17921 HBL1_DMSO_200M_050219_1,17932 HBL1_DMSO_200M_050219_1,17932,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17933 85.742 47.0 2020600.0 25 0 201760.0 + 45588 YVFPGVTRL 9 83 526.3001756426642 1050.5857983521282 2 526.3007690310478 MULTI CID FTMS 0 0 0 17921 903805.75 0.5552631281871424 2 -0.1993637084960937 12 Unmodified _YVFPGVTRL_ ENSG00000160284|ENST00000291672|SPATC1L;nc|ENSG00000160284|Q9H0A9-2|SPATC1L 39.21299971606389 0.0797768173001226 3 YV{M(Oxidation (M))|F}PGVTR{I|L} 9 0 + 83.013 0.0 0.0 7.9016 7.9016 91.776 0.0 0.0 0.0 46.8149511042639 10.75720713938118 10.75720713938118 8.57840941039747 0 0.7302046884880937 2.0 0.0 0.3807196863200844 + + YV{M(Oxidation (M))|F}PGVTR{I|L};YV{I|L}MGVTR{I|L};YV{[WT]|[RM]}{I|L}TR{I|L};YWTV{I|L}TR{I|L};WYTV{I|L}TR{I|L};YW{I|L}S{I|L}TR{I|L};YWT{I|L}VTR{I|L};WYT{I|L}VTR{I|L};WY{I|L}S{I|L}TR{I|L};YW{I|L}TVTR{I|L} 7.9016;7.085;5.8031;4.7068;4.4203;4.328;4.328;4.0415;4.0415;3.9493 +;-;-;-;-;-;-;-;-;- + 281 + 1 0.936 77609.8 1.0 12194 5737 17921 HBL1_DMSO_200M_050219_1,17933 HBL1_DMSO_200M_050219_1,17933,YVFPGVTRL True True YVFPGVTRL 85.741549 526.300769031048 37944348.0 17921.0 nc|ENSG00000160284|Q9H0A9-2|SPATC1L;;ENSG00000160284|ENST00000291672|SPATC1L 6.533697128295898 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17934 85.744 127.0 921090.0 25 0 56882.0 + 24755 MPFSVREGINI 11 113 631.8316949909115 1261.648837048623 2 631.8323242068291 MULTI CID FTMS 0 0 0 17921 792875.1875 0.4740410461305427 2 -0.1993637084960937 13 Unmodified _MPFSVREGINI_ ENSG00000164163|ENST00000296577|ABCE1 70.92866715596459 0.0297132693151486 3 MP{M(Oxidation (M))|F}SV 5 6 67.237 0.0 0.0 5.3293 0.0 0.0 0.0 697.3663771543189 697.3663771543189 29.51667520279372 0.0 0.0 0.0 0 1.055462187404089 1.5228787452803376 0.3494850021680094 0.0 + MP{M(Oxidation (M))|F}SV 5.3293 + + 917 + 1 0.936 92038.1 1.0 12195 5737 17921 HBL1_DMSO_200M_050219_1,17934 HBL1_DMSO_200M_050219_1,17934,MPFSVREGINI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17935 85.746 51.0 1408300.0 25 0 169140.0 + 1251 AILEDLQKI 9 100 521.8124082538679 1041.6102635745358 2 521.8144409060478 MULTI CID FTMS 0 0 0 17921 797533.375 0.330047361366252 4 -0.371185302734375 14 Unmodified _AILEDLQKI_ ENSG00000197142|ENST00000354655|ACSL5;nc|ENSG00000197142|Q9ULC5-3|ACSL5 56.17704186161178 0.0281986971544335 3 [{I|L}A]GQP{I|L}{M(Oxidation (M))|F}[{I|L}A]{I|L} 10 6 + 50.229 0.0 0.0 4.8223 4.8223 85.285 0.0 0.0 0.0 17.7152557756666 30.218910854695608 17.7152557756666 12.051794385463609 0 0.5 2.0 0.0 0.2887254899964357 [{I|L}A]GQP{I|L}{M(Oxidation (M))|F}[{I|L}A]{I|L};[{I|L}A]G[AG]P{I|L}{M(Oxidation (M))|F}[{I|L}A]{I|L};[Q{I|L}]QP{I|L}{M(Oxidation (M))|F}[{I|L}A]{I|L};QQ{I|L}P{I|L}{M(Oxidation (M))|F}[{I|L}A]{I|L};[AG]{I|L}QP{I|L}{M(Oxidation (M))|F}[{I|L}A]{I|L};[AG]Q{I|L}P{I|L}{M(Oxidation (M))|F}[{I|L}A]{I|L};[{I|L}P]QQ{I|L}{M(Oxidation (M))|F}[{I|L}A]{I|L};{[QN]|[E{I|L}]|[KN]}D{I|L}[KQ][{I|L}A]{I|L};[QA]G{I|L}P{I|L}{M(Oxidation (M))|F}[{I|L}A]{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{I|L}[KQ][{I|L}A]{I|L} 4.8223;3.6652;2.2531;2.1618;2.1228;2.0316;2.0198;1.9759;1.8926;1.6665 -;-;-;-;-;-;-;-;-;- 313 1 0.936 61144.8 1.0 12196 5737 17921 HBL1_DMSO_200M_050219_1,17935 HBL1_DMSO_200M_050219_1,17935,AILEDLQKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17936 85.749 181.0 1120000.0 25 0 141870.0 + 14866 ILIDLNRGEL 10 158 578.3399103748058 1154.6652678164114 2 578.3406860232353 MULTI CID FTMS 0 0 0 17921 699812.4375 1.0 0 0.0 15 Unmodified _ILIDLNRGEL_ ENSG00000137193|ENST00000373509|PIM1;nc|ENSG00000137193|P11309-2|PIM1 57.24910588100465 0.0438022649904578 3 {I|L}{I|L}{I|L}D{I|L}N 6 4 84.558 0.0 0.0 7.3231 0.0 0.0 0.0 470.2383516901001 470.2383516901001 57.20236600603002 0.0 0.0 0.0 0 0.7302046884880937 2.0 1.2302046884880935 0.5796896906561032 + {I|L}{I|L}{I|L}D{I|L}N 7.3231 + + 1140 + 1 0.936 152441.7 1.0 12197 5737 17921 HBL1_DMSO_200M_050219_1,17936 HBL1_DMSO_200M_050219_1,17936,ILIDLNRGEL True True ILIDLNRGEL 85.749026 578.340686023235 4773824.5 17921.0 nc|ENSG00000137193|P11309-2|PIM1;;ENSG00000137193|ENST00000373509|PIM1 0.4345440864562988 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17937 85.752 167.0 712090.0 25 0 88264.0 + 12645 GVLDSVDVRL 10 149 536.8043223325685 1071.594091731937 2 536.8037597537041 MULTI CID FTMS 0 0 0 17921 669483.8125 0.896491555057939 4 -0.371185302734375 16 Unmodified _GVLDSVDVRL_ ENSG00000169105|ENST00000306243|CHST14 45.739877483867886 0.1051543674217965 3 [VG]{I|L}DSVDVR{I|L} 10 0 + 73.427 0.0 0.0 6.8521 6.8521 89.272 0.0 0.0 0.0 7.781512503836424 8.740984232451012 7.781512503836424 8.740984232451012 0 0.6307196863200843 1.6989700043360187 0.6307196863200843 0.0 + + [VG]{I|L}DSVDVR{I|L};[VG]{I|L}DSVD{I|L}RV;[VG]{I|L}DSA{I|L}ER{I|L};{[TV]|[{I|L}S]}PSSVDVR{I|L};{[TV]|[{I|L}S]}VEAADVR{I|L};[VG]{I|L}GKSNER{I|L};{[TV]|[{I|L}S]}V[DG]VDVR{I|L};[VG]{I|L}D{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{[TV]|[{I|L}S]}VEN{I|L}ER{I|L};{[TV]|[{I|L}S]}PSSVD{I|L}RV 6.8521;6.0364;5.5641;5.1036;4.8666;4.7475;4.5815;4.5329;4.4379;4.2879 +;-;-;-;-;-;-;-;-;- + 4037 + 1 0.936 94662.9 1.0 12198 5737 17921 HBL1_DMSO_200M_050219_1,17937 HBL1_DMSO_200M_050219_1,17937,GVLDSVDVRL True True GVLDSVDVRL 85.752304 536.803759753704 11032483.0 17921.0 ENSG00000169105|ENST00000306243|CHST14 6.274104754130046 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17938 85.754 50.0 1416600.0 25 0 131950.0 9851 FPFGKIGTV 9 80 483.2764472907161 964.5383416482322 2 483.2767822146416 MULTI CID FTMS 0 0 0 17921 563542.125 0.0373551386852517 23 -2.3100357055664062 17 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 30.63653989081413 0.1413794767160703 3 {M(Oxidation (M))|F}PE 3 7 28.188 0.0 0.0 2.9224 0.0 0.0 573.3498949729434 0.0 573.3498949729434 0.0 3.745528187832221 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {M(Oxidation (M))|F}PE 2.9224 - 192 1 0.936 61861.0 1.0 12199 5737 17921 HBL1_DMSO_200M_050219_1,17938 HBL1_DMSO_200M_050219_1,17938,FPFGKIGTV False True DPALPRLAI 85.75362 483.276782214642 6036897.0 17921.0 ENST00000477069.5_1_9:131747266-131765892:+|nuORF;;ENSG00000095319|ENST00000372577|NUP188;;nc|ENSG00000095319|Q5SRE5-2|NUP188 3.3361438115437827 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17939 85.757 159.0 1088800.0 25 0 127090.0 + 10501 FVADEELVHL 10 145 586.3030855262006 1170.591618119201 2 586.3032104372978 MULTI CID FTMS 0 0 0 17921 467272.90625 0.4962901211244336 -2 0.2482452392578125 18 Unmodified _FVADEELVHL_ ENSG00000149823|ENST00000279281|VPS51;ENST00000530673.1_2_11:64878667-64879056:+|nuORF;ENST00000533827.5_1_11:64876997-64879056:+|nuORF;nc|ENSG00000149823|Q9UID3-2|VPS51 64.23631603340823 0.0254735623525308 3 {M(Oxidation (M))|F}VADEE{I|L}VH{I|L} 10 0 + 65.599 0.0 0.0 5.6039 5.6039 57.729 0.0 0.0 0.0 10.962408376219258 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.9049471895720984 0.0 + + {M(Oxidation (M))|F}VADEE{I|L}VH{I|L};{M(Oxidation (M))|F}VADEE{I|L}V{I|L}H;{M(Oxidation (M))|F}VADEE{I|L}HV{I|L};{M(Oxidation (M))|F}VADEE{I|L}H{I|L}V;[VP][RK]EEDAVE;[H{I|L}]V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EDAVE;[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}REDAVE;[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]}REDAVE;[HV]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EDAVE;{M(Oxidation (M))|F}VA{[RE]|[WV]}YHH{I|L} 5.6039;5.6039;4.7887;4.5316;3.7309;3.5866;3.3233;3.2661;3.1578;3.145 +;-;-;-;-;-;-;-;-;- + 2526 + 1 0.936 131508.7 1.0 12200 5737 17921 HBL1_DMSO_200M_050219_1,17939 HBL1_DMSO_200M_050219_1,17939,FVADEELVHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17940 85.758 65.0 711450.0 25 0 118530.0 -1 LPDVMQGMVL 10 83 559.780699527931 1117.546846122662 2 559.7817870974541 MULTI CID FTMS 0 0 0 17921 437758.8125 0.6281523348160324 -2 0.2482452392578125 19 Oxidation (M) _LPDVM(Oxidation (M))QGMVL_ ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A 15.847184025352805 0.5816416552707754 3 [{I|L}P]EV[C(Carbamidomethyl (C))C]W{I|L}V 9 -1 + 40.581 0.0 0.0 3.6312 3.6312 83.239 0.0 0.0 0.0 20.00771835650156 6.14393726401687 6.14393726401687 21.249387366082995 0 0.6989700043360187 1.5228787452803376 0.0 0.0 [{I|L}P]EV[C(Carbamidomethyl (C))C]W{I|L}V;{[QN]|[E{I|L}]|[KN]}PV[C(Carbamidomethyl (C))C]W{I|L}V 3.6312;1.7298 -;- 106 1 0.936 41360.7 1.0 12201 5737 17921 HBL1_DMSO_200M_050219_1,17940 HBL1_DMSO_200M_050219_1,17940,LPDVMQGMVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17941 85.761 108.0 718760.0 25 0 63622.0 -1 SVLCSMQCV 9 123 513.7239306883038 1025.4333084434074 2 513.7251464724541 MULTI CID FTMS 0 0 0 17921 396532.21875 1.0 0 0.0 20 Carbamidomethyl (C) _SVLC(Carbamidomethyl (C))SMQCV_ ENST00000371437.4_1_X:119010550-119010595:+|nuORF 18.13498045792455 0.3457906370836843 3 [VS]AAR{I|L}{I|L} 7 -1 27.768 0.0 0.0 2.7079 0.0 0.0 0.0 311.97710662139497 311.97710662139497 14.668592001111527 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5451140161145328 0.0 [VS]AAR{I|L}{I|L} 2.7079 - 611 1 0.936 62339.7 1.0 12202 5737 17921 HBL1_DMSO_200M_050219_1,17941 HBL1_DMSO_200M_050219_1,17941,SVLCSMQCV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17943 85.765 104.0 490680.0 25 0 164490.0 + -1 QLALPLRQRKM 11 58 685.4110230289199 1368.8074931246397 2 685.4117309451103 MULTI CID FTMS 0 0 0 17942 826028.5 1.0 0 0.0 1 Oxidation (M) _QLALPLRQRKM(Oxidation (M))_ REV__ENSG00000176087|ENST00000323146|SLC35A4 1.3295316138638542 0.8688751186870782 3 {I|L}A 2 -1 10.969 0.0 0.0 0.80136 0.0 0.0 684.437877501396 497.2233065240844 1181.6611840254805 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A 0.80136 + + 39 + 1 0.936 54148.2 1.0 12203 5738 17942 HBL1_DMSO_200M_050219_1,17943 HBL1_DMSO_200M_050219_1,17943,QLALPLRQRKM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17944 85.769 240.0 497050.0 25 0 49744.0 + 11466 GIGHWVVAV 9 136 469.2681621052244 936.5217712772488 2 469.2684814333916 MULTI CID FTMS 0 0 0 17942 212712.125 0.2258800270573343 5 -0.527984619140625 2 Unmodified _GIGHWVVAV_ ENST00000269919.10_1_19:18480032-18480299:+|nuORF 14.581692164780916 0.4419739649577144 3 {[TV]|[{I|L}S]}Q 3 8 21.087 0.0 0.0 2.2517 0.0 0.0 0.0 605.3248467989863 605.3248467989863 2.8997654084889 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.0 {[TV]|[{I|L}S]}Q 2.2517 - 249 1 0.936 93574.0 1.0 12204 5738 17942 HBL1_DMSO_200M_050219_1,17944 HBL1_DMSO_200M_050219_1,17944,GIGHWVVAV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17945 85.771 83.0 721180.0 25 0 64249.0 + 10691 FVVEHDFIMA 10 85 604.2942771913656 1206.5740014495311 2 604.2947875857353 MULTI CID FTMS 0 0 0 17942 490929.78125 0.1419698476967628 -2 0.1524505615234375 3 Unmodified _FVVEHDFIMA_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000510321.1_1_4:146044588-146044753:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 14.838274106304384 0.5985701837916485 3 [HV]E{M(Oxidation (M))|F}DV{M(Oxidation (M))|F}{I|L}CV 10 6 + 48.193 0.0 0.0 3.9942 3.9942 75.679 0.0 0.0 0.0 10.307262395435965 27.47933455448525 10.307262395435965 3.979400086720375 0 0.5796896906561032 1.0 0.0 0.0 [HV]E{M(Oxidation (M))|F}DV{M(Oxidation (M))|F}{I|L}CV;[HV]E{M(Oxidation (M))|F}D{M(Oxidation (M))|F}V{I|L}CV;[HV]ED{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}CV;[HV]E{M(Oxidation (M))|F}D{I|L}{M(Oxidation (M))|F}VCV;[HV]ED{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{I|L}CV;[HV]E{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}VCV;[HD]{M(Oxidation (M))|F}{I|L}DV{M(Oxidation (M))|F}{I|L}CV;[HV]ED{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}VCV;[HD]{I|L}{M(Oxidation (M))|F}DV{M(Oxidation (M))|F}{I|L}CV;[HV]ED{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}VCV 3.9942;3.6644;3.5987;3.3492;3.2689;3.1654;3.0194;2.9538;2.9159;2.7699 -;-;-;-;-;-;-;-;-;- 463 1 0.936 47354.3 1.0 12205 5738 17942 HBL1_DMSO_200M_050219_1,17945 HBL1_DMSO_200M_050219_1,17945,FVVEHDFIMA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17946 85.775 202.0 509850.0 25 0 40962.0 + 38326 TQLESSWEL 9 118 546.7638338791755 1091.513114825151 2 546.7640869021416 MULTI CID FTMS 0 0 0 17942 368757.34375 0.4769740897474359 2 -0.2559585571289062 4 Unmodified _TQLESSWEL_ ENSG00000092148|ENST00000399332|HECTD1 31.26834338654808 0.1333407332142048 3 [QT]{I|L}E[Y{I|L}]P[DN] 9 5 + 31.545 0.0 0.0 2.89 2.89 76.228 0.0 0.0 0.0 5.782184059010266 13.357340314095657 5.782184059010266 6.874985640851609 0 0.0 0.0 0.5356668758921829 0.3054621874040891 [QT]{I|L}E[Y{I|L}]P[DN];[QT]{I|L}ESS[KA][DN];{[QD]|[EN]|[WG]|[KD]|[RS]}VE[Y{I|L}]P[DN];[Q{I|L}]TE[Y{I|L}]P[DN];{[TV]|[{I|L}S]}AAE[Y{I|L}]P[DN];[C(Carbamidomethyl (C))S][NG]KVWE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VESS[KA][DN];[Q{I|L}]TESS[KA][DN];[WE]R[Y{I|L}]YY;[C(Carbamidomethyl (C))S][W{I|L}]VWE{I|L} 2.89;2.2602;2.1496;2.0728;1.8278;1.5525;1.5198;1.443;1.2875;1.2348 -;-;-;-;-;-;-;-;-;- 270 1 0.936 84546.9 1.0 12206 5738 17942 HBL1_DMSO_200M_050219_1,17946 HBL1_DMSO_200M_050219_1,17946,TQLESSWEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17947 85.778 133.0 419750.0 25 0 34733.0 -1 TVFLMTDAQV 10 101 570.7829550813793 1139.5513572295586 2 570.7827026247978 MULTI CID FTMS 0 0 0 17942 353710.78125 0.3696952967976395 3 -0.3315048217773437 5 Oxidation (M) _TVFLM(Oxidation (M))TDAQV_ ENSG00000007174|ENST00000262442|DNAH9;nc|ENSG00000007174|Q9NYC9-2|DNAH9 18.1463463914782 0.5430639438673815 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}E 6 -1 29.08 0.0 0.0 2.5518 0.0 0.0 0.0 400.1861588255149 400.1861588255149 8.334702287164077 0.0 0.0 0.0 0 0.3807196863200844 0.8860566476931632 1.009053043163611 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}E 2.5518 - 394 1 0.936 48748.4 1.0 12207 5738 17942 HBL1_DMSO_200M_050219_1,17947 HBL1_DMSO_200M_050219_1,17947,TVFLMTDAQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17948 85.781 179.0 418670.0 25 0 63279.0 + 18612 LAEQVSYM 8 93 314.15321840409246 939.4378258124774 3 314.1530944705009 MULTI CID FTMS 0 0 0 17942 361098.75 0.094453388033308 16 -1.6299209594726562 6 Unmodified _LAEQVSYM_ REV__ENSG00000135049|ENST00000357081|AGTPBP1;REV__nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;REV__nc|ENSG00000135049|Q9UPW5-3|AGTPBP1 19.438996006549623 0.6237395211498085 3 [{I|L}A]S 3 -1 34.934 0.0 0.0 3.7186 0.0 0.0 0.0 665.261892377169 665.261892377169 27.94408732588998 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.4247425010840047 0.0 [{I|L}A]S 3.7186 - 33 + 1 0.936 65002.7 1.0 12208 5738 17942 HBL1_DMSO_200M_050219_1,17948 HBL1_DMSO_200M_050219_1,17948,LAEQVSYM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17949 85.785 171.0 530830.0 25 0 61558.0 + 21265 LPEAMIIRI 9 130 528.3199801443271 1054.6254073554542 2 528.8246337771416 MULTI CID FTMS 0 0 0 17942 331650.5 0.4080839003976551 -1 0.0396804809570312 7 Unmodified _LPEAMIIRI_ REV__ENSG00000073910|ENST00000542859|FRY 12.531546534597751 0.4974689918368763 3 NA{I|L}DK{I|L}[R{I|L}]{I|L} 9 -1 + 48.594 0.0 0.0 4.6077 4.6077 87.184 0.0 0.0 0.0 29.13979329422069 5.942124970647029 5.942124970647029 48.59366274865181 0 0.0 0.0 0.0 0.0 NA{I|L}DK{I|L}[R{I|L}]{I|L} 4.6077 - 570 + 1 0.936 75990.5 1.0 12209 5738 17942 HBL1_DMSO_200M_050219_1,17949 HBL1_DMSO_200M_050219_1,17949,LPEAMIIRI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17950 85.795 604.0 453260.0 25 0 41832.0 + 26977 PEEVVALDL 9 192 492.76610304106543 983.5176531489308 2 492.7665588259697 MULTI CID FTMS 0 0 0 17942 328411.78125 0.3561652698314017 10 -1.0038375854492188 8 Unmodified _PEEVVALDL_ REV__nc|ENSG00000259706|Q58FF3|HSP90B2P 34.10243960390752 0.1078313939113124 3 {NN|[MP]|[D{I|L}]|[EV]}EPVA 6 -1 32.001 0.0 0.0 3.2537 0.0 0.0 0.0 356.1799816003559 356.1799816003559 2.696234349565124 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.7086889184686722 0.0 {NN|[MP]|[D{I|L}]|[EV]}EPVA 3.2537 - 2070 1 0.936 208465.6 1.0 12210 5738 17942 HBL1_DMSO_200M_050219_1,17950 HBL1_DMSO_200M_050219_1,17950,PEEVVALDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17951 85.805 552.0 311070.0 25 0 23940.0 + 9424 FLADPSAFVAA 11 179 554.7873174043262 1107.5600818754524 2 554.7876464724541 MULTI CID FTMS 0 0 0 17942 320638.34375 0.2383298271349097 -3 0.2879257202148437 9 Unmodified _FLADPSAFVAA_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000496593.5_1_11:61404148-61405105:+|nuORF;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 68.08070601005525 0.0379666706128858 3 {[VA]|[{I|L}G]}[MT]VEA{M(Oxidation (M))|F}VAA 11 5 + 60.16 0.0 0.0 5.4317 5.4317 80.237 0.0 0.0 0.0 3.9415558348213855 9.357285695614364 3.9415558348213855 3.9415558348213855 0 0.9291746928241124 1.3979400086720375 1.7179001828205482 0.0 {[VA]|[{I|L}G]}[MT]VEA{M(Oxidation (M))|F}VAA;[PS]A{M(Oxidation (M))|F}VEA{M(Oxidation (M))|F}VAA;{[VA]|[{I|L}G]}[MT]DA{I|L}{M(Oxidation (M))|F}VAA;[{I|L}T]{I|L}{[CA]|SS}EA{M(Oxidation (M))|F}VAA;[{I|L}P][YQ]EA{M(Oxidation (M))|F}VAA;{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[PS]EA{M(Oxidation (M))|F}VAA;{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}VEA{M(Oxidation (M))|F}VAA;{[VA]|[{I|L}G]}[MT]D{I|L}A{M(Oxidation (M))|F}VAA;[PS]A{M(Oxidation (M))|F}DA{I|L}{M(Oxidation (M))|F}VAA;{[VA]|[{I|L}G]}[MT]VEAV{M(Oxidation (M))|F}AA 5.4317;5.0758;4.8912;4.8376;4.6428;4.5943;4.57;4.5399;4.5354;4.4569 -;-;-;-;-;-;-;-;-;- 5465 1 0.936 138947.5 1.0 12211 5738 17942 HBL1_DMSO_200M_050219_1,17951 HBL1_DMSO_200M_050219_1,17951,FLADPSAFVAA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17952 85.809 193.0 428110.0 25 0 43526.0 + 16072 ITPDEFHFV 9 122 552.7714627811108 1103.5283726290215 2 552.7720214724541 MULTI CID FTMS 0 0 0 17942 299633.9375 0.1042310771884416 5 -0.527984619140625 10 Unmodified _ITPDEFHFV_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 28.486842064014134 0.1687311288560894 3 [{I|L}T]PDE{M(Oxidation (M))|F}HV{M(Oxidation (M))|F} 9 2 + 51.837 0.0 0.0 4.6974 4.6974 78.797 0.0 0.0 0.0 27.147642715192504 4.771212547196626 4.771212547196626 4.771212547196626 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]PDE{M(Oxidation (M))|F}HV{M(Oxidation (M))|F};[{I|L}T]PDE{M(Oxidation (M))|F}H{M(Oxidation (M))|F}V;[{I|L}T]PDE[C(Carbamidomethyl (C))R]T{I|L};[{I|L}T][{I|L}T]{M(Oxidation (M))|F}D[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F};[{I|L}T][{I|L}T]{M(Oxidation (M))|F}D[MT]Y;[{I|L}T]PD{[WT]|[RM]}[QP]{M(Oxidation (M))|F};[{I|L}T]PD{[WT]|[RM]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{[VA]|[{I|L}G]}[KC]{M(Oxidation (M))|F}EDPPV;{[{M(Oxidation (M))|F}H]|[RQ]}ED{M(Oxidation (M))|F}[{I|L}T]PV;{[VA]|[{I|L}G]}[YG]{[WT]|[RM]}DPPV 4.6974;4.2651;2.8822;2.7337;2.283;2.17;1.7377;1.7007;1.1986;0.3269 -;+;-;-;-;-;-;-;-;- + 378 + 1 0.936 71901.8 1.0 12212 5738 17942 HBL1_DMSO_200M_050219_1,17952 HBL1_DMSO_200M_050219_1,17952,ITPDEFHFV False True ITPDEFHFV 85.808686 552.772021472454 82613394.0 17942.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12;;ENST00000479037.5_1_2:230672327-230744801:-|nuORF 7.07705291112264 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17953 85.814 298.0 393530.0 25 0 30301.0 + 2260 AQFPESFTV 9 148 513.2504018529905 1024.486250772781 2 513.2509643435478 MULTI CID FTMS 0 0 0 17942 287134.28125 0.8990433736245952 -4 0.3281326293945312 11 Unmodified _AQFPESFTV_ ENSG00000103657|ENST00000443617|HERC1 20.453626601364224 0.2830276176381075 3 {[TV]|[{I|L}S]}QM 4 8 22.949 0.0 0.0 2.2401 0.0 0.0 0.0 562.2491346441278 562.2491346441278 5.747811219182065 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5866968715561641 0.3807196863200844 {[TV]|[{I|L}S]}QM 2.2401 - 857 1 0.936 92438.6 1.0 12213 5738 17942 HBL1_DMSO_200M_050219_1,17953 HBL1_DMSO_200M_050219_1,17953,AQFPESFTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17954 85.824 580.0 308490.0 25 0 27029.0 + 22281 LPRTIFPTSTI 11 160 623.3642391962327 1244.7139254592653 2 623.3643066287041 MULTI CID FTMS 0 0 0 17942 255928.015625 0.0695557448379911 -4 0.3281326293945312 12 Unmodified _LPRTIFPTSTI_ ENSG00000139218|ENST00000369367|SCAF11;ENST00000546534.1_1_12:46325244-46326951:-|nuORF 77.04852534044906 0.0119778990295177 3 [TP][R{I|L}]{I|L}{M(Oxidation (M))|F}PTST{I|L} 11 2 + 90.964 0.0 0.0 7.308 7.308 82.093 0.0 0.0 0.0 1.510088187458578 16.57577319177794 1.510088187458578 1.510088187458578 0 1.6307196863200843 1.5228787452803376 1.850576203518622 0.2742275032520141 [TP][R{I|L}]{I|L}{M(Oxidation (M))|F}PTST{I|L};[{I|L}T][RP]{I|L}{M(Oxidation (M))|F}PTST{I|L};[TP][R{I|L}]{M(Oxidation (M))|F}{I|L}PTST{I|L};[TP]{M(Oxidation (M))|F}[R{I|L}]{I|L}PTST{I|L};[{I|L}T][RP]{M(Oxidation (M))|F}{I|L}PTST{I|L};[{I|L}T]M[R{I|L}]{I|L}PTST{I|L};[{I|L}P]RT{I|L}{M(Oxidation (M))|F}PTST{I|L};[{I|L}P]RT{M(Oxidation (M))|F}{I|L}PTST{I|L};[TP][R{I|L}]{I|L}M{I|L}TST{I|L};[TP][R{I|L}]{I|L}MT{I|L}ST{I|L} 7.308;7.1867;6.8208;6.7818;6.6994;6.6605;6.6093;6.122;6.0926;6.0506 -;-;-;-;-;-;+;-;-;- + 6180 1 0.936 131635.0 1.0 12214 5738 17942 HBL1_DMSO_200M_050219_1,17954 HBL1_DMSO_200M_050219_1,17954,LPRTIFPTSTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17955 85.83 214.0 593300.0 25 0 48347.0 + 17939 KQYEEFYVGL 10 151 638.3167709953767 1274.618989057553 2 638.3174316287041 MULTI CID FTMS 0 0 0 17942 251906.390625 0.1165998470794076 -2 0.1524505615234375 13 Unmodified _KQYEEFYVGL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 70.33199760932243 0.018925923965799 3 [KA][YG]EE{M(Oxidation (M))|F}YVG{I|L} 11 2 + 86.351 0.0 0.0 6.7746 6.7746 86.635 0.0 0.0 0.0 5.441440881096582 62.95156567584613 5.441440881096582 5.836134377877329 0 1.3807196863200843 0.0 1.4916440611282624 0.8655452262316815 [KA][YG]EE{M(Oxidation (M))|F}YVG{I|L};[KA][YG]E{M(Oxidation (M))|F}EYVG{I|L};[AG][YK]EE{M(Oxidation (M))|F}YVG{I|L};[YE][KQ]E{M(Oxidation (M))|F}YVG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}YVG{I|L};[AG][YK]E{M(Oxidation (M))|F}EYVG{I|L};[YE]E{M(Oxidation (M))|F}[KQ]YVG{I|L};[YE]E[KQ]{M(Oxidation (M))|F}YVG{I|L};EE{M(Oxidation (M))|F}Y[KQ]YVG{I|L};EEY[KQ]{M(Oxidation (M))|F}YVG{I|L} 6.7746;6.3168;5.6841;5.4605;5.3073;5.2262;5.2143;5.2143;5.1688;5.1587 -;-;-;-;-;-;-;-;-;- 3779 1 0.936 98963.8 1.0 12215 5738 17942 HBL1_DMSO_200M_050219_1,17955 HBL1_DMSO_200M_050219_1,17955,KQYEEFYVGL True True KQYEEFYVGL 85.829568 638.317431628704 53283084.0 17942.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 7.684738000233968 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17956 85.841 663.0 252020.0 25 0 21308.0 + 13861 HVIFRRLQTSR 11 161 706.9150763878355 1411.8155998424709 2 706.9153930544853 MULTI CID FTMS 0 0 0 17942 242432.328125 1.0 0 0.0 14 Unmodified _HVIFRRLQTSR_ REV__nc|ENSG00000235931|A4QN01|LINC01553 9.5439744041441 0.8301188422821563 3 [Q{I|L}]NA{I|L}{I|L}GV[KQ]{I|L}C{I|L} 13 -1 + 66.79 0.0 0.0 4.7308 4.7308 71.401 0.0 0.0 0.0 5.788616231848202 4.188843227070947 4.188843227070947 0.0122623118827505 0 1.960409376976188 0.0 0.0 0.2742275032520141 [Q{I|L}]NA{I|L}{I|L}GV[KQ]{I|L}C{I|L};[Q{I|L}]NA{I|L}{I|L}G{I|L}{I|L}E{I|L}C{I|L};[Q{I|L}]NA{I|L}{I|L}G{I|L}E{I|L}{I|L}C{I|L};[Q{I|L}]NA{I|L}{I|L}GVS[WR]R;[Q{I|L}]NA{I|L}{I|L}GVS{I|L}[QT]R;[Q{I|L}]NA{I|L}{I|L}R[KQ]{I|L}C{I|L};[Q{I|L}]NA{I|L}{I|L}GV[WR]SR;[Q{I|L}]NA{I|L}{I|L}GVS[RV]SR;[Q{I|L}]NA{I|L}{I|L}{I|L}G{I|L}E{I|L}C{I|L};[Q{I|L}]GGA{I|L}{I|L}GV[KQ]{I|L}C{I|L} 4.7308;4.7299;4.5491;4.4341;4.306;4.2603;4.2209;4.1402;4.1314;4.0882 -;-;-;-;-;-;-;-;-;- 8321 + 1 0.936 124727.4 1.0 12216 5738 17942 HBL1_DMSO_200M_050219_1,17956 HBL1_DMSO_200M_050219_1,17956,HVIFRRLQTSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17957 85.854 748.0 356990.0 25 0 25004.0 10248 FQRSKRRYFKL 11 210 510.30120318537735 1527.881780156332 3 510.6345092654228 MULTI CID FTMS 0 0 0 17942 238783.5 0.675589563711713 -2 0.1524505615234375 15 Unmodified _FQRSKRRYFKL_ ENSG00000077044|ENST00000264057|DGKD;ENST00000489613.1_1_2:234294779-234297133:+|nuORF;nc|ENSG00000077044|Q16760-2|DGKD 1.1097533296519684 0.8699120469545434 3 {I|L}P{I|L}[QA]{M(Oxidation (M))|F}S{I|L} 8 9 33.095 0.0 0.0 2.166 0.0 0.0 640.3874681161132 0.0 640.3874681161132 0.0 18.208034882975937 0.0 0.0 0 0.0 0.0 1.1393016935150575 0.0 {I|L}P{I|L}[QA]{M(Oxidation (M))|F}S{I|L} 2.166 - 4265 + 1 0.936 207338.6 1.0 12217 5738 17942 HBL1_DMSO_200M_050219_1,17957 HBL1_DMSO_200M_050219_1,17957,FQRSKRRYFKL False True LPTHDLPLI 85.854065 510.634509265423 5686006.5 17942.0 ENSG00000115902|ENST00000234256|SLC1A4;;nc|ENSG00000115902|P43007-2|SLC1A4 1.8243491848309836 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17958 85.868 800.0 188220.0 25 0 16045.0 + 24657 MLSAKVHLVPI 11 173 403.2467035210808 1206.7182811634425 3 403.2467834353447 MULTI CID FTMS 0 0 0 17942 219374.921875 0.2149177954447207 5 -0.527984619140625 16 Unmodified _MLSAKVHLVPI_ REV__ENST00000474783.2_2_11:31811484-31812594:-|nuORF 1.214830529360525 0.8694162858786273 3 {I|L} 1 -1 9.3323 0.0 0.0 0.77336 0.0 0.0 1075.6232627081672 0.0 1075.6232627081672 0.0 0.4065246983874004 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.77336 + + 56 + 1 0.936 119112.2 0.8999999761581421 12218 5738 17942 HBL1_DMSO_200M_050219_1,17958 HBL1_DMSO_200M_050219_1,17958,MLSAKVHLVPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17959 85.883 800.0 533730.0 25 0 49482.0 + -1 LAEMEMSL 8 255 478.2091679885692 954.4037830439383 2 478.7115966677666 MULTI CID FTMS 0 0 0 17942 214488.53125 0.1331755824570129 52 -5.367424011230469 17 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 20.871210003555333 0.6025813472596342 3 YPS{I|L} 4 -1 29.884 0.0 0.0 3.1311 0.0 0.0 476.1584655163977 0.0 476.1584655163977 0.0 4.388793896675267 0.0 0.0 0 0.3807196863200844 0.0 0.555462187404089 0.0 YPS{I|L} 3.1311 - 2636 + 1 0.936 318416.3 0.959999978542328 12219 5738 17942 HBL1_DMSO_200M_050219_1,17959 HBL1_DMSO_200M_050219_1,17959,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17960 85.891 483.0 323030.0 25 0 27053.0 + 42868 VVLGIRPIRL 10 145 379.26039503789 1134.75935571387 3 379.2599365115166 MULTI CID FTMS 0 0 0 17942 207411.34375 0.6654732825606166 1 -0.1596832275390625 18 Unmodified _VVLLRARPVI_ ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1 27.22323531849824 0.3570408936368626 3 VV{I|L}{I|L}PV{I|L}[RN]{I|L} 10 5 + 65.486 0.0 0.0 5.7709 5.7709 75.201 0.0 0.0 0.0 34.815082168734165 0.202033860882878 0.202033860882878 0.202033860882878 0 0.4802046884880938 2.0 0.0 1.2302046884880935 VV{I|L}{I|L}PV{I|L}[RN]{I|L};VV{I|L}{I|L}PV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}R;VV{I|L}{I|L}PV{I|L}[RV]Q;VV{I|L}{I|L}P[{I|L}P][KT]R;V{I|L}V{I|L}PV{I|L}[RN]{I|L};V{I|L}V{I|L}PV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}R;V{I|L}V{I|L}PV{I|L}[RV]Q;V{I|L}V{I|L}P[{I|L}P][KT]R 5.7709;5.7531;5.3101;4.7275;3.8836;3.8658;3.4228;2.8401 -;-;-;-;-;-;-;- 130 + 1 0.936 131373.4 1.0 12220 5738 17942 HBL1_DMSO_200M_050219_1,17960 HBL1_DMSO_200M_050219_1,17960,VVLLRARPVI False False VVLGIRPIRL 85.891403 379.259936511517 1951671.75 17942.0 ENSG00000005007|ENST00000262803|UPF1;;nc|ENSG00000005007|Q92900|UPF1 3.675605535507202 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17961 85.905 800.0 186750.0 25 0 9413.2 + 9016 FDFQSMEESL 10 163 616.7592906710845 1231.504028408969 2 616.7598144412041 MULTI CID FTMS 0 0 0 17942 205590.796875 0.9300738810749372 2 -0.2559585571289062 19 Unmodified _FDFQSMEESL_ REV__ENSG00000253729|ENST00000314191|PRKDC;REV__nc|ENSG00000253729|P78527-2|PRKDC 13.90604991867851 0.6142120002215601 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L} 7 -1 53.783 0.0 0.0 4.3672 0.0 0.0 0.0 384.0685773717924 384.0685773717924 34.050537161753226 0.0 0.0 0.0 0 1.0 1.3010299956639813 0.0 1.7619229975844686 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L} 4.3672 - 969 1 0.936 110635.6 0.8600000143051147 12221 5738 17942 HBL1_DMSO_200M_050219_1,17961 HBL1_DMSO_200M_050219_1,17961,FDFQSMEESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17962 85.92 800.0 183440.0 25 0 16374.0 + 23424 LTEPMVLSLAA 11 194 572.8154757007657 1143.6163984683312 2 572.8146850466728 MULTI CID FTMS 0 0 0 17942 193264.375 0.922968391206216 1 -0.1596832275390625 20 Unmodified _LTEPMVLSLAA_ REV__ENST00000392541.3_1_2:176043116-176043824:-|nuORF 22.736283301280096 0.5583477779825423 3 {[QN]|[E{I|L}]|[KN]}D{I|L}S{I|L}V 7 -1 26.674 0.0 0.0 2.3324 0.0 0.0 0.0 371.17948375569375 371.17948375569375 3.1246936830414995 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3252574989159953 0.5752574989159953 {[QN]|[E{I|L}]|[KN]}D{I|L}S{I|L}V 2.3324 - 3994 1 0.936 113805.3 0.8399999737739563 12222 5738 17942 HBL1_DMSO_200M_050219_1,17962 HBL1_DMSO_200M_050219_1,17962,LTEPMVLSLAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17964 85.925 49.0 1053400.0 25 0 93409.0 + -1 MGVAVMDVLV 10 88 533.2683645240601 1064.52217611492 2 533.2684814333916 MULTI CID FTMS 0 0 0 17963 434034.3125 0.3018263920924259 2 -0.1718215942382812 1 2 Oxidation (M) _M(Oxidation (M))GVAVM(Oxidation (M))DVLV_ REV__ENST00000441603.1_1_11:5592613-5592883:-|nuORF 10.823927491677226 0.6659270209832991 3 {[QV]|[N{I|L}]|[RA]|[KV]}V 3 -1 21.427 0.0 0.0 2.0128 0.0 0.0 0.0 735.3107557870482 735.3107557870482 -0.1772876696043113 0.0 -0.1772876696043113 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V 2.0128 - 99 1 0.975 49376.0 1.0 12223 5739 17963 HBL1_DMSO_200M_050219_1,17964 HBL1_DMSO_200M_050219_1,17964,MGVAVMDVLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17965 85.927 93.0 829350.0 25 0 133780.0 + 43705 YAYLPLHV 8 94 488.26737169272167 974.5201904522434 2 488.2681457400322 MULTI CID FTMS 0 0 0 17963 541519.5625 0.7985132743428078 1 -0.0962753295898437 2 Unmodified _YAYLPLHV_ ENSG00000119599|ENST00000358377|DCAF4;nc|ENSG00000119599|Q8WV16-2|DCAF4;nc|ENSG00000119599|Q8WV16-3|DCAF4;nc|ENSG00000119599|Q8WV16-4|DCAF4;nc|ENSG00000119599|Q8WV16-5|DCAF4 64.08090720244739 0.1161809961245979 3 YAY{I|L}P{I|L}HV 8 0 + 72.108 0.0 0.0 7.3994 7.3994 85.81 0.0 0.0 0.0 34.024174299985006 3.521825181113627 3.521825181113627 3.521825181113627 0 0.805462187404089 2.0 0.0 0.0 + + YAY{I|L}P{I|L}HV;YAY{I|L}P{I|L}VH;YAY{I|L}VHP{I|L};YAY{I|L}P[HV]{I|L};YAY{I|L}V[{I|L}P]H;{I|L}{I|L}[HT]{I|L}YDT;[PA][KA]P{I|L}YDT 7.3994;7.038;6.2213;5.9124;5.6322;2.0945;1.5664 +;-;-;-;-;-;- + 168 + 1 0.975 65490.3 1.0 12224 5739 17963 HBL1_DMSO_200M_050219_1,17965 HBL1_DMSO_200M_050219_1,17965,YAYLPLHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17966 85.928 29.0 1664600.0 25 0 171140.0 + 13918 HVYELLNTI 9 71 551.3004712332556 1100.5863895333111 2 551.3004638552666 MULTI CID FTMS 0 0 0 17963 1616767.5 0.4445291746694112 -1 0.1596832275390625 3 Unmodified _HVYELLNTI_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 48.345845343767074 0.0439967357579942 3 [HV]YE{I|L}{I|L}NT{I|L} 9 0 + 67.355 0.0 0.0 6.1199 6.1199 88.094 0.0 0.0 0.0 13.951138653996267 9.335295873671754 9.335295873671754 9.208187539523747 0 0.6435078169319297 1.5228787452803376 0.3807196863200844 0.0 + + [HV]YE{I|L}{I|L}NT{I|L};[HV]YE{I|L}{I|L}GGT{I|L};{[QS]|[NT]}{I|L}{[CP]|[EA]}{I|L}{I|L}NT{I|L};[{I|L}T]N{[CP]|[EA]}{I|L}{I|L}NT{I|L};[HV]{I|L}[YE]{I|L}NT{I|L};{[QS]|[NT]}{I|L}{[CP]|[EA]}{I|L}{I|L}GGT{I|L};[{I|L}T]N{[CP]|[EA]}{I|L}{I|L}GGT{I|L};[{I|L}T]GG{[CP]|[EA]}{I|L}{I|L}NT{I|L};{[QN]|[E{I|L}]|[KN]}Y[HV]{I|L}NT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T{[CP]|[EA]}{I|L}{I|L}NT{I|L} 6.1199;5.2833;4.8523;4.6238;4.0547;4.0196;3.7911;3.7911;3.2685;3.2401 +;-;-;-;-;-;-;-;-;- + 257 1 0.975 46239.1 1.0 12225 5739 17963 HBL1_DMSO_200M_050219_1,17966 HBL1_DMSO_200M_050219_1,17966,HVYELLNTI True True HVYELLNTI 85.928292 551.300463855267 107877132.0 17963.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 7.406394163767497 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17967 85.929 42.0 1952700.0 25 0 121240.0 + 22254 LPRLTPPVL 9 96 503.326445046479 1004.638337159758 2 503.3265869021416 MULTI CID FTMS 0 0 0 17963 1122806.25 0.0389528746388431 -8 0.8020172119140625 4 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 52.268347100219714 0.0353964759249114 3 [{I|L}P][{I|L}T]RPPV{I|L} 9 2 + 64.019 0.0 0.0 6.3724 6.3724 90.801 0.0 0.0 0.0 10.92232767701148 36.95518990217387 10.92232767701148 13.194765492042109 0 0.805462187404089 1.3010299956639813 1.1861818737241734 0.0 [{I|L}P][{I|L}T]RPPV{I|L};{[QN]|[E{I|L}]|[KN]}[KP]{I|L}PPV{I|L};{[QN]|[E{I|L}]|[KN]}[KP]P{I|L}PV{I|L};[VP]PR{I|L}PT{I|L}{I|L};[{I|L}P][{I|L}T]K[HA]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[KP]PP{I|L}V{I|L};{[QN]|[E{I|L}]|[KN]}[KP]PPV{I|L}{I|L} 6.3724;5.059;3.583;3.4005;2.5012;2.2258;1.4018 -;-;-;-;-;-;- 366 1 0.975 67021.1 1.0 12226 5739 17963 HBL1_DMSO_200M_050219_1,17967 HBL1_DMSO_200M_050219_1,17967,LPRLTPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17968 85.931 69.0 1337000.0 25 0 205590.0 + 2357 AQLPMSIRI 9 91 514.7996074269496 1027.584661920699 2 514.7998535037041 MULTI CID FTMS 0 0 0 17963 725703.125 0.8095127376467607 -1 0.1596832275390625 5 Unmodified _AQLPMSIRI_ ENSG00000116017|ENST00000263620|ARID3A;ENST00000590749.2_19:966789-968568:+|nuORF 38.17557092003332 0.0854718145212029 3 [QA]{I|L}PM{[TV]|[{I|L}S]}R{I|L} 9 0 + 49.147 0.0 0.0 4.7827 4.7827 71.826 0.0 0.0 0.0 12.542644353703524 12.98332479720628 12.542644353703524 0.2152998730866073 0 1.0 0.6777807052660807 0.0 0.3494850021680094 + + [QA]{I|L}PM{[TV]|[{I|L}S]}R{I|L};[QA]{I|L}{I|L}[WE]R{I|L};[QA]{I|L}PM[RV]T{I|L};[QA]{I|L}P[YR]{I|L}[PA];[QA]{I|L}P[YR][PA]{I|L};[KT]PV[WE]R{I|L} 4.7827;4.7618;4.4898;3.0796;3.0796;1.8158 +;-;-;-;-;- + 272 + 1 0.975 73766.8 1.0 12227 5739 17963 HBL1_DMSO_200M_050219_1,17968 HBL1_DMSO_200M_050219_1,17968,AQLPMSIRI True True AQLPMSIRI 85.931115 514.799853503704 7255024.5 17963.0 ENSG00000116017|ENST00000263620|ARID3A;;ENST00000590749.2_19:966789-968568:+|nuORF 3.846750736236572 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17969 85.936 235.0 1176500.0 25 0 224530.0 -1 ISEMGFAGI 9 120 470.7263124699047 939.4380720066094 2 470.7266113162041 MULTI CID FTMS 0 0 0 17963 717234.5 0.1473136778031846 17 -1.6382293701171875 6 Oxidation (M) _ISEM(Oxidation (M))GFAGI_ ENSG00000168291|ENST00000302746|PDHB;ENST00000482894.5_1_3:58417133-58419536:-|nuORF;nc|ENSG00000168291|P11177-2|PDHB;nc|ENSG00000168291|P11177-3|PDHB 36.04419817259434 0.0971720506436186 3 {I|L}A{I|L} 3 -1 47.435 0.0 0.0 5.0493 0.0 0.0 0.0 639.2097438455762 639.2097438455762 28.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}A{I|L} 5.0493 - 168 + 1 0.975 214824.4 1.0 12228 5739 17963 HBL1_DMSO_200M_050219_1,17969 HBL1_DMSO_200M_050219_1,17969,ISEMGFAGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17970 85.937 74.0 1277500.0 25 0 215720.0 11049 GDFSAAFEILS 11 109 578.7774145131633 1155.5402760931263 2 578.7784911990166 MULTI CID FTMS 0 0 0 17963 572962.875 0.4423874177020673 -1 0.1596832275390625 7 Unmodified _GDFSAAFEILS_ ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2 20.41453444215458 0.6105011870913812 3 [DG]{[YC]|[HE]}C{I|L}{I|L}RT{I|L} 10 8 + 54.122 0.0 0.0 4.6837 4.6837 86.91 0.0 0.0 0.0 32.4396447873054 10.088643834802156 10.088643834802156 31.22486274231747 0 0.6237125054200234 1.154901959985743 0.0 0.7742275032520141 [DG]{[YC]|[HE]}C{I|L}{I|L}RT{I|L};[DG]{M(Oxidation (M))|F}{I|L}[QA][YE]T{I|L};[DP]VVN[QA]{I|L}DW;[DP]VVGG[QA]{I|L}DW 4.6837;1.9815;0.82478;0.031688 -;-;-;- 314 + 1 0.975 73183.6 1.0 12229 5739 17963 HBL1_DMSO_200M_050219_1,17970 HBL1_DMSO_200M_050219_1,17970,GDFSAAFEILS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17971 85.939 78.0 1440400.0 25 0 153940.0 + 21049 LPAELINQI 9 135 505.79747336813 1009.58039380306 2 505.7973510622978 MULTI CID FTMS 0 0 0 17963 528758.75 0.0214308663244323 -3 0.3121337890625 8 Unmodified _LPAELINQI_ ENSG00000160877|ENST00000292431|NACC1 57.47134341890925 0.0274820932774257 3 [{I|L}P]AE{I|L}{I|L}NQ{I|L} 9 0 + 45.614 0.0 0.0 4.5181 4.5181 70.798 0.0 0.0 0.0 0.0539503188670664 5.425515300088435 0.0539503188670664 0.0539503188670664 0 0.5484550065040282 1.3010299956639813 0.6307196863200843 0.0 + + [{I|L}P]AE{I|L}{I|L}NQ{I|L};[PA]E{I|L}{I|L}{I|L}NQ{I|L};[{I|L}P]AE{I|L}N{I|L}Q{I|L};[PA]E{I|L}{I|L}N{I|L}Q{I|L};[PA]{I|L}E{I|L}{I|L}NQ{I|L};{[CP]|[EA]}P{I|L}{I|L}{I|L}NQ{I|L};[{I|L}P]AE{I|L}{I|L}GGQ{I|L};[PA]E{I|L}{I|L}{I|L}GGQ{I|L};[VP][DV]{I|L}{I|L}NQ{I|L};[PA]{I|L}E{I|L}N{I|L}Q{I|L} 4.5181;4.5128;3.9919;3.9866;3.6183;3.6169;3.6061;3.6007;3.5554;3.0921 +;-;-;-;-;-;-;-;-;- + 1175 1 0.975 90909.1 1.0 12230 5739 17963 HBL1_DMSO_200M_050219_1,17971 HBL1_DMSO_200M_050219_1,17971,LPAELINQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17972 85.941 68.0 1341600.0 25 0 121790.0 28743 PVVTAYFQ 8 105 462.7439258842263 923.4732988352524 2 462.7447387576103 MULTI CID FTMS 0 0 0 17963 493829.5625 0.2804036324235193 17 -1.6382293701171875 9 Unmodified _PVVTAYFQ_ ENSG00000113492|ENST00000231420|AGXT2;nc|ENSG00000113492|Q9BYV1-2|AGXT2 15.768221252438446 0.6779680726941459 3 [{I|L}A]SVPV 6 8 37.802 0.0 0.0 4.0934 0.0 0.0 0.0 354.10791732574006 354.10791732574006 13.58903059843059 0.0 0.0 0.0 0 0.5 2.0 1.3494850021680094 0.0 [{I|L}A]SVPV 4.0934 - 276 1 0.975 72847.3 1.0 12231 5739 17963 HBL1_DMSO_200M_050219_1,17972 HBL1_DMSO_200M_050219_1,17972,PVVTAYFQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17973 85.942 64.0 1433800.0 25 0 137710.0 + 25709 NIIELVHQV 9 115 532.8088799324801 1063.60320693176 2 532.8100463747978 MULTI CID FTMS 0 0 0 17963 501319.375 0.0555628813289001 -3 0.3121337890625 10 Unmodified _NIIELVHQV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 26.268140514670165 0.1969607489560049 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHQV 9 0 + 65.261 0.0 0.0 6.1359 6.1359 83.601 0.0 0.0 0.0 21.97498719580942 4.771212547196626 4.771212547196626 4.771212547196626 0 0.805462187404089 2.0 0.0 0.2134679910804404 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHQV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VH[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}HN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}HNV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[PS][VP]PV;{[QV]|[N{I|L}]|[RA]|[KV]}H[RK]DP[KG];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EVV[HQ]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C(Carbamidomethyl (C))[YR]{I|L}{I|L} 6.1359;5.6873;5.0694;4.7034;4.6208;4.2548;3.9421;3.0718;3.0665;2.7404 +;-;-;-;-;-;-;-;-;- + 847 + 1 0.975 76813.3 1.0 12232 5739 17963 HBL1_DMSO_200M_050219_1,17973 HBL1_DMSO_200M_050219_1,17973,NIIELVHQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17974 85.945 132.0 704860.0 25 0 149170.0 + 28753 PWAGPLSL 8 88 420.7342859599903 839.4540189867805 2 420.7342712283134 MULTI CID FTMS 0 0 0 17963 394276.15625 0.0994744806540331 -3 0.3121337890625 11 Unmodified _PWAGPLSL_ ENST00000368347.8_1_1:155293744-155293912:+|nuORF 56.04830969593885 0.114297258605095 3 [WP]GAP{I|L}S{I|L} 8 2 + 66.719 0.0 0.0 7.9479 7.9479 86.632 0.0 0.0 0.0 20.96910013008056 46.29615981915208 20.96910013008056 3.26606256887672 0 0.9247425010840048 1.3979400086720375 0.3807196863200844 0.0 [WP]GAP{I|L}S{I|L};[WP]GAPS{I|L}{I|L};[WP]QP{I|L}S{I|L};[WP]G{I|L}[PA]S{I|L};[WP]QPS{I|L}{I|L};[WP]{I|L}G[PA]S{I|L};[WP]{I|L}[QP]S{I|L};[{I|L}P]WG[PA]S{I|L};[PG]WAP{I|L}S{I|L};[PG]WAPS{I|L}{I|L} 7.9479;7.5588;7.1844;7.0796;6.7953;6.3624;5.5988;5.3556;4.997;4.608 -;-;-;-;-;-;-;-;-;- 456 1 0.975 76423.7 1.0 12233 5739 17963 HBL1_DMSO_200M_050219_1,17974 HBL1_DMSO_200M_050219_1,17974,PWAGPLSL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17975 85.947 123.0 996510.0 25 0 114550.0 + 15195 IPEPVVRIL 9 124 518.3319070107915 1034.649261088383 2 518.3323852419853 MULTI CID FTMS 0 0 0 17963 363099.53125 0.792604616652263 -1 0.1596832275390625 12 Unmodified _IPEPVVRIL_ ENSG00000043143|ENST00000681547|JADE2;nc|ENSG00000043143|Q9NQC1-2|JADE2;nc|ENSG00000043143|Q9NQC1-3|JADE2;nc|ENSG00000043143|Q9NQC1|JADE2 53.832793166522166 0.0319663582346103 3 {I|L}PEPVV[R{I|L}]{I|L} 9 0 + 79.012 0.0 0.0 7.6366 7.6366 97.043 0.0 0.0 0.0 60.91280819485851 9.810742312574718 9.810742312574718 79.01175198630048 0 1.079689690656103 1.3010299956639813 0.8494850021680094 0.2887254899964357 + + {I|L}PEPVV[R{I|L}]{I|L} 7.6366 + + 106 + 1 0.975 99182.2 1.0 12234 5739 17963 HBL1_DMSO_200M_050219_1,17975 HBL1_DMSO_200M_050219_1,17975,IPEPVVRIL True True IPEPVVRIL 85.947448 518.332385241985 4959921.5 17963.0 nc|ENSG00000043143|Q9NQC1-3|JADE2;;nc|ENSG00000043143|Q9NQC1-2|JADE2;;nc|ENSG00000043143|Q9NQC1|JADE2;;ENSG00000043143|ENST00000681547|JADE2 3.909441153208415 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17976 85.952 234.0 691930.0 25 0 74033.0 22847 LRTYSLCDW 9 143 386.1875532730256 1155.5408304192767 3 386.1874572634697 MULTI CID FTMS 0 0 0 17963 337688.875 0.5699684298061366 -1 0.1596832275390625 13 Unmodified _LRTYSLCDW_ ENST00000534532.6_1_11:134054823-134055313:-|nuORF 24.020572477871973 0.2255576514309169 3 C{I|L}{I|L}RT{I|L} 6 7 32.668 0.0 0.0 2.827 0.0 0.0 438.1220992719581 0.0 438.1220992719581 0.0 8.342714568095431 0.0 0.0 0 0.0 0.0 0.7902877273156862 0.3252574989159953 C{I|L}{I|L}RT{I|L} 2.827 - 191 + 1 0.975 131200.3 1.0 12235 5739 17963 HBL1_DMSO_200M_050219_1,17976 HBL1_DMSO_200M_050219_1,17976,LRTYSLCDW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 17977 85.957 280.0 641540.0 25 0 75080.0 + 38332 TQLGPPYHILV 11 158 619.3514307462522 1236.6883085593042 2 619.3524047732353 MULTI CID FTMS 0 0 0 17963 279913.03125 0.3620153236642516 -2 0.1993637084960937 14 Unmodified _TQLGPPYHILV_ ENSG00000119616|ENST00000341162|FCF1 86.33184430468982 0.0029476721545555 3 [QT]{I|L}GHAG{I|L}{I|L} 9 5 67.548 0.0 0.0 5.462 0.0 0.0 0.0 343.16164359611 343.16164359611 35.90692414767452 0.0 0.0 0.0 0 1.5 1.0 1.2689301784845295 0.4531198197908842 [QT]{I|L}GHAG{I|L}{I|L} 5.462 - 8583 1 0.975 130383.3 1.0 12236 5739 17963 HBL1_DMSO_200M_050219_1,17977 HBL1_DMSO_200M_050219_1,17977,TQLGPPYHILV True True TQLGPPYHILV 85.956988 619.352404773235 27705579.0 17963.0 ENSG00000119616|ENST00000341162|FCF1 6.8326042493184405 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17978 85.962 290.0 392160.0 25 0 39249.0 -1 0 132 647.3742707953855 646.3669943287855 1 647.3763305544853 MULTI CID FTMS 0 0 0 17963 270465.53125 1.0 0 0.0 15 3 [{I|L}P]AYA{I|L} 6 -1 + 56.022 0.0 0.0 8.6672 8.6672 82.463 0.0 0.0 0.0 10.783161130202489 16.191329672323377 10.783161130202489 0.3294454028465168 0 0.5387254899964358 1.6989700043360187 0.0 0.0 [{I|L}P]AYA{I|L};[{I|L}P]AS{M(Oxidation (M))|F}{I|L};[{I|L}P]S{M(Oxidation (M))|F}A{I|L};[{I|L}P]SA{M(Oxidation (M))|F}{I|L};[{I|L}P]{M(Oxidation (M))|F}SA{I|L};{[TV]|[{I|L}S]}A{I|L}M{I|L};{[TV]|[{I|L}S]}{I|L}VC{I|L};{[TV]|[{I|L}S]}V{I|L}C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}A{I|L};[{I|L}A]S{I|L}M{I|L} 8.6672;8.6163;8.5456;7.9056;7.7091;6.999;6.99;6.8934;6.8218;6.7649 -;-;-;-;-;-;-;-;-;- 404 1 0.975 89505.8 1.0 12237 5739 17963 HBL1_DMSO_200M_050219_1,17978 HBL1_DMSO_200M_050219_1,17978, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17979 85.975 719.0 239780.0 25 0 10156.0 -1 0 149 1044.5065639241448 3130.4978623726347 3 1045.176318347454 MULTI CID FTMS 0 0 0 17963 244918.0625 0.342148227511442 -2 0.1993637084960937 16 3 STDVM[EP] 7 -1 48.505 0.0 0.0 1.5494 0.0 0.0 2353.1277183425204 0.0 2353.1277183425204 0.0 6.419372535201404 0.0 0.0 0 0.0 0.0 2.1549471895720984 0.0 STDVM[EP] 1.5494 - 20099 1 0.975 113887.6 1.0 12238 5739 17963 HBL1_DMSO_200M_050219_1,17979 HBL1_DMSO_200M_050219_1,17979, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17980 85.987 700.0 310520.0 25 0 12820.0 -1 0 156 881.4173461794853 0 881.4173461794853 PEAK CID FTMS 0 0 0 -1 0 17 3 QY{M(Oxidation (M))|F}ANQQAE 9 -1 79.057 0.0 0.0 4.4898 0.0 0.0 230.1814992091875 448.1594637506469 678.3409629598344 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.8494850021680094 2.1866654986684733 QY{M(Oxidation (M))|F}ANQQAE 4.4898 - 11263 + 1 0.975 145347.9 1.0 12239 5739 17963 HBL1_DMSO_200M_050219_1,17980 HBL1_DMSO_200M_050219_1,17980, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17981 86.0 726.0 273450.0 25 0 16747.0 -1 0 145 1057.8492985997011 3170.526066399304 3 1058.184374988079 MULTI CID FTMS 0 0 0 17963 243159.25 0.7165389816892063 -1 0.1596832275390625 18 3 D[WH]VM{[QD]|[EN]|[WG]|[KD]|[RS]} 7 -1 30.106 0.0 0.0 0.94954 0.0 0.0 2241.089130355298 0.0 2241.089130355298 0.0 4.699463174498462 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.0 D[WH]VM{[QD]|[EN]|[WG]|[KD]|[RS]} 0.94954 - 3501 1 0.975 132050.1 1.0 12240 5739 17963 HBL1_DMSO_200M_050219_1,17981 HBL1_DMSO_200M_050219_1,17981, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 17982 86.015 800.0 184310.0 25 0 14547.0 + 11600 GKTSKDVI 8 155 424.247330259058 846.4801075849159 2 424.5579406619072 MULTI CID FTMS 0 0 0 -1 0 19 Unmodified _GKTSKDVI_ REV__ENSG00000167183|ENST00000300557|PRR15L 10.823927491677226 0.7510103885582552 3 V{I|L} 2 -1 16.498 0.0 0.0 1.949 0.0 0.0 616.3177368347191 0.0 616.3177368347191 0.0 4.508272069161734 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 V{I|L} 1.949 + + 248 + 1 0.975 123271.4 0.9300000071525574 12241 5739 17963 HBL1_DMSO_200M_050219_1,17982 HBL1_DMSO_200M_050219_1,17982,GKTSKDVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17983 86.017 75.0 682470.0 25 0 44500.0 + 36658 TQVTALIKL 9 93 494.3078292128518 986.6011054925036 2 494.3067504763603 MULTI CID FTMS 0 0 0 17963 228259.765625 0.0301077177881976 11 -1.0655593872070312 20 Unmodified _TAVLLTELK_ nc|ENSG00000078618|O43847-2|NRDC;ENSG00000078618|ENST00000352171|NRDC 19.256988751693697 0.3154191944385105 3 [TA]GV 4 7 30.049 0.0 0.0 3.0458 0.0 0.0 0.0 655.4049134361161 655.4049134361161 1.404243831634986 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.2742275032520141 0.0 [TA]GV 3.0458 - 142 1 0.975 44769.2 1.0 12242 5739 17963 HBL1_DMSO_200M_050219_1,17983 HBL1_DMSO_200M_050219_1,17983,TAVLLTELK False False TQVTALIKL 86.016639 494.30675047636 2991829.0 17963.0 nc|ENSG00000078618|O43847-2|NRDC;;ENSG00000078618|ENST00000352171|NRDC 1.2488215665022533 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17985 86.021 7.5 7031500.0 25 0 1118100.0 18689 LAIWEASL 8 67 451.75254133747273 901.4905297417456 2 451.7529785037041 MULTI CID FTMS 0 0 0 17984 8774688.0 0.3760837705275106 9 -0.8440628051757812 1 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 28.17323086031832 0.4514957916281387 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 3 57.708 0.0 0.0 6.4014 0.0 0.0 0.0 199.1081353638453 199.1081353638453 38.25720713938118 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 6.4014 - 121 1 0.99 46225.7 1.0 12243 5740 17984 HBL1_DMSO_200M_050219_1,17985 HBL1_DMSO_200M_050219_1,17985,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17986 86.022 21.0 1963900.0 25 0 135070.0 + 19624 LGDSFILLVQG 11 75 581.329401324827 1160.644249716454 2 581.3298217654228 MULTI CID FTMS 0 0 0 17984 1409687.875 0.0933641831196211 6 -0.622528076171875 2 Unmodified _LGDSFILLVQG_ REV__ENSG00000172752|ENST00000373157|COL6A5;REV__nc|ENSG00000172752|A8TX70-2|COL6A5;REV__nc|ENSG00000172752|A8TX70|COL6A5 15.248480904072842 0.7179608125786238 3 K{I|L}{I|L}V{[QG]|[NA]} 6 -1 24.385 0.0 0.0 2.101 0.0 0.0 504.2234059064469 0.0 504.2234059064469 0.0 4.948500216800934 0.0 0.0 0 0.5 0.0 0.0 0.0 K{I|L}{I|L}V{[QG]|[NA]} 2.101 - 60 1 0.99 37672.4 1.0 12244 5740 17984 HBL1_DMSO_200M_050219_1,17986 HBL1_DMSO_200M_050219_1,17986,LGDSFILLVQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 17987 86.023 32.0 2182300.0 25 0 227780.0 + 10748 FYILTSKEL 9 83 557.3130436855885 1112.6115344379768 2 557.3135253787041 MULTI CID FTMS 0 0 0 17984 1380632.625 0.8399566342937228 -1 0.0962753295898437 3 Unmodified _FYILTSKEL_ ENSG00000081320|ENST00000263955|STK17B 45.69961567697781 0.0497987121815769 3 [Y{M(Oxidation (M))|F}]{I|L}{I|L}TSKE{I|L} 9 0 + 58.536 0.0 0.0 5.2612 5.2612 86.746 0.0 0.0 0.0 7.147642715192504 11.863595409533154 7.147642715192504 11.863595409533154 0 0.805462187404089 0.0 1.2302046884880935 0.0 + + [Y{M(Oxidation (M))|F}]{I|L}{I|L}TSKE{I|L};[KS]T{I|L}{M(Oxidation (M))|F}{I|L}{I|L}[YE];[KS]T{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[YE];[{I|L}T][KS]{M(Oxidation (M))|F}{I|L}{I|L}[YE];{I|L}{I|L}T[KS]{M(Oxidation (M))|F}{I|L}[YE];[{I|L}T][KS]{I|L}{M(Oxidation (M))|F}{I|L}[YE];[{I|L}T]{I|L}[KS]{M(Oxidation (M))|F}{I|L}[YE] 5.2612;4.1949;3.1137;2.7691;2.7561;1.688;1.688 +;-;-;-;-;-;- + 322 + 1 0.99 58540.1 1.0 12245 5740 17984 HBL1_DMSO_200M_050219_1,17987 HBL1_DMSO_200M_050219_1,17987,FYILTSKEL True True FYILTSKEL 86.02331 557.313525378704 25630094.0 17984.0 ENSG00000081320|ENST00000263955|STK17B 4.973330179850261 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17988 86.025 51.0 1196500.0 25 0 173190.0 + 4650 DAYVLPKLY 9 87 541.2999781941046 1080.585403455009 2 541.3015014529228 MULTI CID FTMS 0 0 0 17984 695895.0625 0.0024582734963158 31 -3.071273803710937 4 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 43.85829265575387 0.0542763391141878 3 {[DA]|[EG]}YV{I|L}PK{I|L}Y 9 0 + 58.893 0.0 0.0 5.4501 5.4501 76.181 0.0 0.0 0.0 13.767285528507962 1.34698573897456 1.34698573897456 1.34698573897456 0 0.8494850021680094 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L}Y;{[DA]|[EG]}YV{I|L}PKY{I|L} 5.4501;5.3255 +;- + 149 + 1 0.99 55819.0 1.0 12246 5740 17984 HBL1_DMSO_200M_050219_1,17988 HBL1_DMSO_200M_050219_1,17988,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17989 86.026 47.0 792280.0 25 0 138770.0 -1 PIMVCVDGIV 10 68 559.780699527931 1117.546846122662 2 559.7812377810478 MULTI CID FTMS 0 0 0 17984 688843.9375 0.9884413866928016 1 -0.0755462646484375 5 Carbamidomethyl (C),Oxidation (M) _PIM(Oxidation (M))VC(Carbamidomethyl (C))VDGIV_ nc|ENSG00000168122|Q9NSJ1|ZNF355P 11.640296217721598 0.652229146672156 3 [{I|L}P]E{I|L}V 5 -1 37.447 0.0 0.0 3.3508 0.0 0.0 0.0 563.1908640272119 563.1908640272119 19.25968732272281 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}P]E{I|L}V 3.3508 - 110 1 0.99 34519.9 1.0 12247 5740 17984 HBL1_DMSO_200M_050219_1,17989 HBL1_DMSO_200M_050219_1,17989,PIMVCVDGIV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 17990 86.027 43.0 1064500.0 25 0 138570.0 + 10502 FVADEELVHL 10 69 586.3030855262006 1170.591618119201 2 586.3034545779228 MULTI CID FTMS 0 0 0 17984 648884.8125 0.6891799586153096 1 -0.0755462646484375 6 Unmodified _FVADEELVHL_ ENSG00000149823|ENST00000279281|VPS51;ENST00000530673.1_2_11:64878667-64879056:+|nuORF;ENST00000533827.5_1_11:64876997-64879056:+|nuORF;nc|ENSG00000149823|Q9UID3-2|VPS51 34.10243960390752 0.2198439752719791 3 [{M(Oxidation (M))|F}V]ADEE{I|L}VH{I|L} 10 0 + 34.927 0.0 0.0 2.9837 2.9837 77.14 0.0 0.0 0.0 7.269987279362624 8.325089127062366 7.269987279362624 7.7815125038364386 0 0.3807196863200844 0.0 0.3494850021680094 0.0 + + [{M(Oxidation (M))|F}V]ADEE{I|L}VH{I|L};[{M(Oxidation (M))|F}V]ADEE{I|L}HV{I|L};[{M(Oxidation (M))|F}V]ADEE{I|L}H{I|L}V;[{M(Oxidation (M))|F}V]AD{[VA]|[{I|L}G]}YHH{I|L};[{M(Oxidation (M))|F}V]A{[RE]|[WV]}YHH{I|L};[{M(Oxidation (M))|F}V]W{[VA]|[{I|L}G]}YHH{I|L} 2.9837;2.3189;2.2725;1.5375;1.4938;0.68097 +;-;-;-;-;- + 130 + 1 0.99 38706.5 1.0 12248 5740 17984 HBL1_DMSO_200M_050219_1,17990 HBL1_DMSO_200M_050219_1,17990,FVADEELVHL False True FVADEELVHL 86.027152 586.303454577923 17047798.0 17984.0 ENST00000530673.1_2_11:64878667-64879056:+|nuORF;;ENST00000533827.5_1_11:64876997-64879056:+|nuORF;;nc|ENSG00000149823|Q9UID3-2|VPS51;;ENSG00000149823|ENST00000279281|VPS51 7.385584831237793 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17991 86.028 48.0 953890.0 25 0 75130.0 + 42722 VVCPLYISA 9 76 482.7602208482151 963.50588876323 2 482.7607910037041 MULTI CID FTMS 0 0 0 17984 644120.625 0.4738857998277335 -2 0.2559585571289062 7 Unmodified _VVCPLYISA_ ENSG00000065802|ENST00000264607|ASB1 26.34127834903884 0.1960301806784604 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{I|L}S 6 6 33.338 0.0 0.0 3.4601 0.0 0.0 0.0 362.1713300076239 362.1713300076239 6.375175252488248 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3494850021680094 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{I|L}S 3.4601 - 150 1 0.99 41222.2 1.0 12249 5740 17984 HBL1_DMSO_200M_050219_1,17991 HBL1_DMSO_200M_050219_1,17991,VVCPLYISA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17992 86.03 93.0 894590.0 25 0 98447.0 + 12865 GVVPQLVKL 9 98 476.8130743891318 951.6115958450636 2 476.8134643435478 MULTI CID FTMS 0 0 0 17984 635120.75 0.010603854507915 14 -1.37396240234375 8 Unmodified _GVVPQLVKL_ ENSG00000182481|ENST00000330459|KPNA2 48.345845343767074 0.0439967357579942 3 [VG]VPQ{I|L}VK{I|L} 9 0 + 63.585 0.0 0.0 6.6819 6.6819 89.893 0.0 0.0 0.0 33.919497169889326 12.587418566968154 12.587418566968154 9.208187539523747 0 0.75 2.0 0.0 0.3054621874040891 + + [VG]VPQ{I|L}VK{I|L};[VG]VP[AG]{I|L}VK{I|L};[VG]V{I|L}[QP]VK{I|L};[VG]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}PK{I|L};[VG]{I|L}[NP]{I|L}VK{I|L};[VG]{I|L}V[QP]VK{I|L};[VG]{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]}PK{I|L} 6.6819;5.7142;5.0231;4.8381;4.55;4.365;4.1799 +;-;-;-;-;-;- + 234 + 1 0.99 72720.6 1.0 12250 5740 17984 HBL1_DMSO_200M_050219_1,17992 HBL1_DMSO_200M_050219_1,17992,GVVPQLVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17993 86.032 73.0 648790.0 25 0 64977.0 + 10188 FQDPVPLTV 9 85 508.2764909113976 1014.5384288895953 2 508.2762939333916 MULTI CID FTMS 0 0 0 17984 595089.6875 0.1687223293668061 4 -0.430999755859375 9 Unmodified _FQDPVPLTV_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 34.40172386719151 0.1061884637610825 3 [{I|L}P]TV 4 5 27.452 0.0 0.0 2.7059 0.0 0.0 0.0 601.2635018511235 601.2635018511235 -2.310450018512924 0.0 -2.310450018512924 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.0 + [{I|L}P]TV 2.7059 + + 243 1 0.99 41479.7 1.0 12251 5740 17984 HBL1_DMSO_200M_050219_1,17993 HBL1_DMSO_200M_050219_1,17993,FQDPVPLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17994 86.035 118.0 587140.0 25 0 99868.0 + 21540 LPIVTPAL 8 97 412.2680075726272 822.5214622120543 2 412.2679321169853 MULTI CID FTMS 0 0 0 17984 510596.90625 0.4310015814460545 -3 0.2956390380859375 10 Unmodified _LPIVTPAL_ ENSG00000182481|ENST00000330459|KPNA2 48.847882008758354 0.1446664477986014 3 [{I|L}P]VT{I|L} 5 3 54.125 0.0 0.0 6.5803 0.0 0.0 0.0 296.1607911377669 296.1607911377669 38.64007808576609 0.0 0.0 0.0 0 0.6861818737241735 1.6989700043360187 0.805462187404089 0.0 [{I|L}P]VT{I|L} 6.5803 - 376 1 0.99 60833.6 1.0 12252 5740 17984 HBL1_DMSO_200M_050219_1,17994 HBL1_DMSO_200M_050219_1,17994,LPIVTPAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17995 86.036 67.0 609870.0 25 0 65361.0 + + 11470 KSADTLWGI 9 69 495.7661833053434 989.5178136774869 2 495.7667114138603 MULTI CID FTMS 0 0 0 17984 506362.25 0.9102413379963312 -1 0.0962753295898437 11 Unmodified _GIGSSTINNK_ nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-3|LDHA;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;ENSG00000134333|ENST00000422447|LDHA;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 25.399314129420983 0.3980215340001851 3 {[TV]|[{I|L}S]}[NS]T{I|L}WG{I|L} 9 -1 {[TV]|[{I|L}S]}[NS]T{I|L} + + 22.792 16.431 2.6704 2.3033 2.3033 49.125 0.0 0.0 0.0 0.0 9.080306233405295 0.0 0.0 0 0.5 0.0 0.0 0.0 {[TV]|[{I|L}S]}[NS]T{I|L}WG{I|L} 2.3033 - 56 + 1 0.99 36244.9 1.0 12253 5740 17984 HBL1_DMSO_200M_050219_1,17995 HBL1_DMSO_200M_050219_1,17995,GIGSSTINNK False False KSADTLWGI 86.036198 495.76671141386 4724404.5 17984.0 nc|ENSG00000134333|P00338-4|LDHA;;nc|ENSG00000134333|P00338-3|LDHA;;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;;ENSG00000134333|ENST00000422447|LDHA;;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 5.611752827962239 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17996 86.045 485.0 654270.0 25 0 68387.0 + 15576 IPYLVVKV 8 152 465.8047698798843 929.5949868265686 2 465.8051025271416 MULTI CID FTMS 0 0 0 17984 505080.15625 0.1922314679024871 -2 0.2559585571289062 12 Unmodified _IPYLVVKV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 98.80718514221952 0.0867704633024581 3 {I|L}PY{I|L}VVKV 8 0 + 87.931 0.0 0.0 9.4591 9.4591 91.167 0.0 0.0 0.0 33.39948061694351 5.797835966168108 5.797835966168108 5.797835966168108 0 1.829689690656103 1.6989700043360187 0.0 0.6549471895720985 + + {I|L}PY{I|L}VVKV;{I|L}PY{I|L}VVVK;{I|L}PYV{I|L}VKV;{I|L}PYV{I|L}VVK;{I|L}VYP{I|L}VKV;{I|L}VYP{I|L}VVK;V{I|L}YP{I|L}VKV;V{I|L}YP{I|L}VVK 9.4591;8.8354;8.7839;8.1602;6.0977;5.474;5.1276;4.5039 +;-;-;-;-;-;-;- + 1219 + 1 0.99 242057.2 1.0 12254 5740 17984 HBL1_DMSO_200M_050219_1,17996 HBL1_DMSO_200M_050219_1,17996,IPYLVVKV True True IPYLVVKV 86.044767 465.805102527142 41423472.0 17984.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 3.83664600054423 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17997 86.047 117.0 660430.0 25 0 116880.0 + 35050 SQTDFSQLL 9 115 519.7578584959058 1037.5011640586115 2 519.7589599490166 MULTI CID FTMS 0 0 0 17984 495402.46875 0.2886282093633577 -2 0.2559585571289062 13 Unmodified _SQTDFSQLL_ ENSG00000155506|ENST00000518297|LARP1;nc|ENSG00000155506|Q6PKG0-3|LARP1 22.736283301280096 0.2418982879461534 3 [AG]STD{M(Oxidation (M))|F} 6 7 23.336 0.0 0.0 2.2493 0.0 0.0 0.0 456.2426551076928 456.2426551076928 5.377297368733956 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.6203715150305281 0.0 [AG]STD{M(Oxidation (M))|F} 2.2493 - 314 1 0.99 63799.6 1.0 12255 5740 17984 HBL1_DMSO_200M_050219_1,17997 HBL1_DMSO_200M_050219_1,17997,SQTDFSQLL False True SQTDFSQLL 86.04722 519.758959949017 13692571.0 17984.0 ENSG00000155506|ENST00000518297|LARP1;;nc|ENSG00000155506|Q6PKG0-3|LARP1 2.233086943626404 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17998 86.055 426.0 372570.0 25 0 46621.0 + 20226 LLDEESQMIWS 11 150 675.8173160693841 1349.620079205568 2 675.8183471560478 MULTI CID FTMS 0 0 0 17984 481609.3125 0.6818852254037686 -2 0.2559585571289062 14 Unmodified _LLDEESQMIWS_ ENSG00000041515|ENST00000457511|MYO16;ENST00000375857.6_1_13:109445985-109707944:+|nuORF;nc|ENSG00000041515|Q9Y6X6-2|MYO16;nc|ENSG00000041515|Q9Y6X6-3|MYO16;nc|ENSG00000041515|Q9Y6X6-4|MYO16;nc|ENSG00000041515|Q9Y6X6|MYO16 32.78568957990786 0.3235288296534633 3 {I|L}{I|L}EDQ{I|L}{I|L}EVS 10 6 86.829 0.0 0.0 6.4336 0.0 0.0 0.0 206.99074731998283 206.99074731998283 55.97006628751894 0.0 0.0 0.0 0 2.1307196863200843 2.0 1.809894379144197 0.2887254899964357 {I|L}{I|L}EDQ{I|L}{I|L}EVS 6.4336 - 4738 + 1 0.99 125744.6 1.0 12256 5740 17984 HBL1_DMSO_200M_050219_1,17998 HBL1_DMSO_200M_050219_1,17998,LLDEESQMIWS False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 17999 86.063 464.0 231180.0 25 0 48709.0 -1 0 77 1076.1353725043923 3225.384288113377 3 1076.470629870892 MULTI CID FTMS 0 0 0 17984 423798.125 0.2499385361088841 4 -0.430999755859375 15 3 VG{I|L}Q[DP][YV] 8 -1 25.71 0.0 0.0 0.79711 0.0 0.0 2335.9577266893525 0.0 2335.9577266893525 0.0 12.522431204052324 0.0 0.0 0 0.0 0.0 1.086696871556164 0.3494850021680094 VG{I|L}Q[DP][YV] 0.79711 - 333 + 1 0.99 96863.6 1.0 12257 5740 17984 HBL1_DMSO_200M_050219_1,17999 HBL1_DMSO_200M_050219_1,17999, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18000 86.066 137.0 928420.0 25 0 98968.0 + 22003 LPPPPMQYI 9 130 528.2826865253334 1054.5508201174666 2 528.2835571169853 MULTI CID FTMS 0 0 0 17984 380608.59375 0.5889346592832289 12 -1.1538314819335938 16 Unmodified _LPPPPMQYI_ ENSG00000155868|ENST00000286317|MED7 40.44857923139169 0.0729940656229577 3 A{I|L}DK{I|L}[R{I|L}]{I|L} 8 8 35.126 0.0 0.0 3.3309 0.0 0.0 113.94406525214931 0.0 113.94406525214931 0.0 8.23690579488996 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}DK{I|L}[R{I|L}]{I|L} 3.3309 - 928 + 1 0.99 102188.8 1.0 12258 5740 17984 HBL1_DMSO_200M_050219_1,18000 HBL1_DMSO_200M_050219_1,18000,LPPPPMQYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18001 86.075 495.0 327050.0 25 0 20910.0 + 21421 LPGSEITL 8 104 829.4665950173105 828.4593185507105 1 831.4725829958916 MULTI CID FTMS 0 0 0 17984 359504.90625 1.0 0 0.0 17 Unmodified _LPGSEITL_ REV__ENSG00000166004|ENST00000325212|CEP295;REV__nc|ENSG00000166004|Q9C0D2-3|CEP295 34.18733598223924 0.3315367612694167 3 [{I|L}T]P{[CA]|SS}{I|L}T 7 -1 21.925 0.0 0.0 2.6465 0.0 0.0 0.0 126.06566057076648 126.06566057076648 -1.5097211230845602 0.0 -1.5097211230845602 0.0 0 0.0 1.0 2.0709991640913 0.0 [{I|L}T]P{[CA]|SS}{I|L}T 2.6465 - 1140 1 0.99 113916.2 1.0 12259 5740 17984 HBL1_DMSO_200M_050219_1,18001 HBL1_DMSO_200M_050219_1,18001,LPGSEITL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18002 86.076 58.0 539320.0 25 0 71943.0 -1 0 59 522.2902501057998 521.2829736391998 1 522.2929565310478 MULTI CID FTMS 0 0 0 17984 336994.40625 1.0 0 0.0 18 3 T{I|L} 2 -1 16.44 0.0 0.0 3.1538 0.0 0.0 289.14031724447165 0.0 289.14031724447165 0.0 5.18110275043508 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 T{I|L} 3.1538 - 18 + 1 0.99 27941.5 1.0 12260 5740 17984 HBL1_DMSO_200M_050219_1,18002 HBL1_DMSO_200M_050219_1,18002, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18003 86.082 273.0 283140.0 25 0 33895.0 + 42787 VVISSDGQFAL 11 123 568.3032507927411 1134.591948652282 2 568.3038818240166 MULTI CID FTMS 0 0 0 17984 298959.125 0.0442905852230702 14 -1.37396240234375 19 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 24.020572477871973 0.5281922720044371 3 NP[Y{M(Oxidation (M))|F}]V{I|L}[RN]{I|L} 9 10 + 32.584 0.0 0.0 2.8719 2.8719 75.056 0.0 0.0 0.0 10.18832471365308 10.365612383257393 10.18832471365308 5.772364076029309 0 0.0 0.0 0.0 0.3252574989159953 NP[Y{M(Oxidation (M))|F}]V{I|L}[RN]{I|L};NP[Y{M(Oxidation (M))|F}]V{I|L}{[NV]|[RG]}G{I|L};NP[Y{M(Oxidation (M))|F}]VRRA{I|L};NP[Y{M(Oxidation (M))|F}]V{I|L}{[NV]|[RG]}AV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YY{I|L}[RN]{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YY{I|L}{[NV]|[RG]}G{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YYRRA{I|L} 2.8719;2.3631;2.0546;1.4338;1.3341;0.8206;0.51681 -;-;-;-;-;-;- 375 + 1 0.99 61491.2 1.0 12261 5740 17984 HBL1_DMSO_200M_050219_1,18003 HBL1_DMSO_200M_050219_1,18003,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18004 86.092 564.0 226540.0 25 0 36064.0 + -1 RIRMNKLNIPV 11 141 685.4110230289199 1368.8074931246397 2 685.4110595583916 MULTI CID FTMS 0 0 0 17984 287315.34375 0.3478273979045517 2 -0.226531982421875 20 Oxidation (M) _RIRM(Oxidation (M))NKLNIPV_ REV__ENSG00000157423|ENST00000393567|HYDIN 5.731851221503515 0.8481046878870278 3 [TP]KCAA{I|L} 7 -1 25.363 0.0 0.0 1.8529 0.0 0.0 0.0 681.4209523720145 681.4209523720145 0.0453216651000509 0.0 0.0 0.0 0 0.0 0.3279021420642826 0.9802046884880936 0.0 [TP]KCAA{I|L} 1.8529 - 1029 1 0.99 103964.2 1.0 12262 5740 17984 HBL1_DMSO_200M_050219_1,18004 HBL1_DMSO_200M_050219_1,18004,RIRMNKLNIPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18006 86.097 17.0 2412400.0 25 0 278140.0 + 10692 FVVEHDFIMA 10 62 604.2942771913656 1206.5740014495311 2 604.2950317263603 MULTI CID FTMS 0 0 0 18005 2635688.25 0.7622032187085764 1 -0.1509857177734375 1 Unmodified _FVVEHDFIMA_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000510321.1_1_4:146044588-146044753:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 24.020572477871973 0.4289996903560794 3 [HD]{M(Oxidation (M))|F}EVV{M(Oxidation (M))|F}{I|L}MA 10 5 + 40.764 0.0 0.0 3.3785 3.3785 69.731 0.0 0.0 0.0 4.259687322722812 23.941901184558205 4.259687322722812 1.249387366082999 0 0.6150219788552205 0.0 0.0 0.0 [HD]{M(Oxidation (M))|F}EVV{M(Oxidation (M))|F}{I|L}MA;[HD]{M(Oxidation (M))|F}{I|L}DV{M(Oxidation (M))|F}{I|L}MA;[HD]{M(Oxidation (M))|F}EVV{I|L}{M(Oxidation (M))|F}MA;[HD]{M(Oxidation (M))|F}EV{I|L}{M(Oxidation (M))|F}VMA;[HD]{M(Oxidation (M))|F}{I|L}DV{I|L}{M(Oxidation (M))|F}MA;[HD]{M(Oxidation (M))|F}{I|L}VD{M(Oxidation (M))|F}{I|L}MA;[HD]{M(Oxidation (M))|F}{I|L}D{I|L}{M(Oxidation (M))|F}VMA;[HD]{M(Oxidation (M))|F}EV{I|L}V{M(Oxidation (M))|F}MA;[HD]{M(Oxidation (M))|F}E{I|L}V{M(Oxidation (M))|F}VMA;[HD]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}MA 3.3785;3.275;2.7992;2.7336;2.6957;2.6301;2.6301;2.5497;2.4841;2.4694 -;-;-;-;-;-;-;-;-;- 471 1 1.004 35546.5 1.0 12263 5741 18005 HBL1_DMSO_200M_050219_1,18006 HBL1_DMSO_200M_050219_1,18006,FVVEHDFIMA False True FVVEHDFIMA 86.096503 604.29503172636 76941456.0 18005.0 ENST00000510321.1_1_4:146044588-146044753:+|nuORF;;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;;ENST00000515678.5_1_4:146042303-146044753:+|nuORF;;ENSG00000164163|ENST00000296577|ABCE1 8.041008949279785 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18007 86.098 18.0 2305200.0 25 0 300580.0 + 22282 LPRTIFPTSTI 11 62 623.3642391962327 1244.7139254592653 2 623.3641235232353 MULTI CID FTMS 0 0 0 18005 3071524.5 0.8347744730638581 -1 0.0755462646484375 2 Unmodified _LPRTIFPTSTI_ ENSG00000139218|ENST00000369367|SCAF11;ENST00000546534.1_1_12:46325244-46326951:-|nuORF 44.391923383255 0.1486875248750151 3 [TP][R{I|L}]{I|L}{M(Oxidation (M))|F}[TP]ST{I|L} 11 2 + 61.049 0.0 0.0 4.9046 4.9046 72.286 0.0 0.0 0.0 0.2422750325201406 16.575773191777934 0.2422750325201406 0.2422750325201406 0 1.7302046884880935 0.9208187539523752 1.1307196863200843 0.0 [TP][R{I|L}]{I|L}{M(Oxidation (M))|F}[TP]ST{I|L};[{I|L}T][RP]{I|L}{M(Oxidation (M))|F}[TP]ST{I|L};[TP][R{I|L}]{M(Oxidation (M))|F}{I|L}[TP]ST{I|L};[{I|L}T][RP]{M(Oxidation (M))|F}{I|L}[TP]ST{I|L};[TP][R{I|L}]{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}DT{I|L};[{I|L}T][RP]{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}DT{I|L};[TP][R{I|L}]{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}T{I|L};[{I|L}T][RP]{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}T{I|L};[TP][R{I|L}]{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}DT{I|L};[{I|L}T][RP]{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}DT{I|L} 4.9046;4.8852;4.3569;4.3375;4.1755;4.1561;4.1309;4.1115;3.6278;3.6084 -;-;-;-;-;-;-;-;-;- 369 1 1.004 38207.6 1.0 12264 5741 18005 HBL1_DMSO_200M_050219_1,18007 HBL1_DMSO_200M_050219_1,18007,LPRTIFPTSTI False True LPRTIFPTSTI 86.097683 623.364123523235 131960676.0 18005.0 ENST00000546534.1_1_12:46325244-46326951:-|nuORF;;ENSG00000139218|ENST00000369367|SCAF11 6.750931104024251 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18008 86.099 26.0 1116300.0 25 0 133860.0 + 17940 KQYEEFYVGL 10 42 638.3167709953767 1274.618989057553 2 638.3171874880791 MULTI CID FTMS 0 0 0 18005 1778513.625 0.8232201501086587 1 -0.1509857177734375 3 Unmodified _KQYEEFYVGL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 16.149105407346934 0.5765757077271437 3 [Y{M(Oxidation (M))|F}]EE[KQ]YVG{I|L} 10 4 [Y{M(Oxidation (M))|F}]EE[KQ]Y + + 26.427 0.24568 0.024881 2.0733 2.0733 48.893 0.0 0.0 0.0 0.0 10.228787452803374 0.0 0.0 0 0.5 0.0 0.0 0.0 [Y{M(Oxidation (M))|F}]EE[KQ]YVG{I|L} 2.0733 - 52 + 1 1.004 31380.1 1.0 12265 5741 18005 HBL1_DMSO_200M_050219_1,18008 HBL1_DMSO_200M_050219_1,18008,KQYEEFYVGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18009 86.1 30.0 781850.0 25 0 69641.0 + 9425 FLADPSAFVAA 11 53 554.7873174043262 1107.5600818754524 2 554.7875244021416 MULTI CID FTMS 0 0 0 18005 1345355.5 1.0 0 0.0 4 Unmodified _FLADPSAFVAA_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000496593.5_1_11:61404148-61405105:+|nuORF;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 13.042465956692816 0.7638483625850725 3 {[VA]|[{I|L}G]}[MT]V{[CP]|[EA]}{M(Oxidation (M))|F}[Q{I|L}] 10 8 + 13.512 0.0 0.0 1.2199 1.2199 79.056 0.0 0.0 0.0 0.8354605145007437 3.818785311707023 0.8354605145007437 13.511522916271057 0 0.0 0.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}[MT]V{[CP]|[EA]}{M(Oxidation (M))|F}[Q{I|L}] 1.2199 - 37 1 1.004 26573.7 1.0 12266 5741 18005 HBL1_DMSO_200M_050219_1,18009 HBL1_DMSO_200M_050219_1,18009,FLADPSAFVAA False True FLADPSAFVAA 86.100039 554.787524402142 20361034.0 18005.0 ENST00000496593.5_1_11:61404148-61405105:+|nuORF;;ENSG00000089157|ENST00000392514|RPLP0;;nc|ENSG00000213553|Q8NHW5|RPLP0P6;;nc|ENSG00000089157|P05388-2|RPLP0 5.824677546819051 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18010 86.102 68.0 1098000.0 25 0 134830.0 + 3757 DAHGVVIVF 9 86 478.7631270868917 955.5117012405832 2 478.7631713747978 MULTI CID FTMS 0 0 0 18005 790378.875 1.0 0 0.0 5 Unmodified _DAHGVVIVF_ ENSG00000128581|ENST00000315322|IFT22;ENST00000468833.1_1_7:100959585-100959801:-|nuORF;nc|ENSG00000128581|Q9H7X7-2|IFT22;nc|ENSG00000128581|Q9H7X7-3|IFT22 19.256988751693697 0.3154191944385105 3 GVV{I|L}V{M(Oxidation (M))|F} 6 3 35.846 0.0 0.0 3.7515 0.0 0.0 323.12324721504064 0.0 323.12324721504064 0.0 13.883578386120234 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.0 + GVV{I|L}V{M(Oxidation (M))|F} 3.7515 + + 287 1 1.004 62286.8 1.0 12267 5741 18005 HBL1_DMSO_200M_050219_1,18010 HBL1_DMSO_200M_050219_1,18010,DAHGVVIVF False True DAHGVVIVF 86.101666 478.763171374798 15072487.0 18005.0 ENST00000468833.1_1_7:100959585-100959801:-|nuORF;;ENSG00000128581|ENST00000315322|IFT22;;nc|ENSG00000128581|Q9H7X7-3|IFT22;;nc|ENSG00000128581|Q9H7X7-2|IFT22 6.174684842427571 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18011 86.105 162.0 619620.0 25 0 75939.0 + 3321 AYLGSAIQL 9 114 468.2632010554283 934.5118491776566 2 468.2636291384697 MULTI CID FTMS 0 0 0 18005 446422.46875 0.5776142168883005 1 -0.1509857177734375 6 Unmodified _AYLGSAIQL_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000477976.5_1_1:880076-889593:-|nuORF 56.541270873467816 0.0279970378729908 3 {[TV]|[{I|L}S]}QAY 5 7 39.411 0.0 0.0 4.2173 0.0 0.0 0.0 369.2123850735224 369.2123850735224 20.65552802072581 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.25 0.0 {[TV]|[{I|L}S]}QAY 4.2173 - 1047 1 1.004 79987.5 1.0 12268 5741 18005 HBL1_DMSO_200M_050219_1,18011 HBL1_DMSO_200M_050219_1,18011,AYLGSAIQL True True AYLGSAIQL 86.104843 468.26362913847 6618991.0 18005.0 ENSG00000188976|ENST00000327044|NOC2L;;ENST00000477976.5_1_1:880076-889593:-|nuORF 4.930296738942464 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18012 86.114 543.0 260030.0 25 0 20573.0 + 1931 AMINRFQFV 9 156 563.2973397828279 1124.5801266324556 2 563.2989379763603 MULTI CID FTMS 0 0 0 18005 290452.4375 1.0 0 0.0 7 Unmodified _AMINRFQFV_ ENSG00000134759|ENST00000358232|ELP2;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 74.42276476219924 0.019389277360085 3 {[DS]|[MA]|[CV]|TT}{I|L}NR{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}V 9 0 + 66.806 0.0 0.0 5.9405 5.9405 78.858 0.0 0.0 0.0 22.632192780232785 54.38424994129406 22.632192780232785 1.9188552623891293 0 2.048455006504028 1.6989700043360187 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}{I|L}NR{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}V;{[DS]|[MA]|[CV]|TT}{I|L}NR{M(Oxidation (M))|F}GA{M(Oxidation (M))|F}V;{[DS]|[MA]|[CV]|TT}{I|L}{[ET]|[MV]}{I|L}MA{M(Oxidation (M))|F}V;{[DS]|[MA]|[CV]|TT}{I|L}{[ET]|[MV]}{M(Oxidation (M))|F}PA{M(Oxidation (M))|F}V;{[DS]|[MA]|[CV]|TT}{I|L}[QT][C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}V;{[DS]|[MA]|[CV]|TT}{I|L}{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}MAV;{[DS]|[MA]|[CV]|TT}{I|L}{[ET]|[MV]}{I|L}[WY]V;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}R{I|L}MA{M(Oxidation (M))|F}V;[EP]YR{I|L}MA{M(Oxidation (M))|F}V;{[DS]|[MA]|[CV]|TT}{I|L}{[ET]|[MV]}{M(Oxidation (M))|F}{I|L}MAV 5.9405;5.7699;5.3565;4.6646;3.946;3.794;3.6829;3.609;3.3761;3.1021 +;-;-;-;-;-;-;-;-;- + 1011 1 1.004 110936.3 1.0 12269 5741 18005 HBL1_DMSO_200M_050219_1,18012 HBL1_DMSO_200M_050219_1,18012,AMINRFQFV True True AMINRFQFV 86.114391 563.29893797636 1794861.125 18005.0 nc|ENSG00000134759|Q6IA86-7|ELP2;;nc|ENSG00000134759|Q6IA86-3|ELP2;;nc|ENSG00000134759|Q6IA86-4|ELP2;;nc|ENSG00000134759|Q6IA86-5|ELP2;;ENSG00000134759|ENST00000358232|ELP2;;nc|ENSG00000134759|Q6IA86-6|ELP2;;nc|ENSG00000134759|Q6IA86-2|ELP2 7.233354886372884 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18013 86.124 545.0 293590.0 25 0 36744.0 + -1 AQFPESFTV 9 110 1025.4899675002 3073.4480731008 3 1025.494799792767 MULTI CID FTMS 0 0 0 18005 238232.8125 0.8185479775230953 -2 0.1718215942382812 8 ENSG00000103657|ENST00000443617|HERC1 3 [EP]S{M(Oxidation (M))|F}TAQ{M(Oxidation (M))|F}V 9 -1 53.754 0.0 0.0 1.749 0.0 0.0 0.0 2063.94267694285 2063.94267694285 28.403178324803743 0.0 0.0 0.0 0 0.5 0.0 2.139301693515057 0.2614393726401688 [EP]S{M(Oxidation (M))|F}TAQ{M(Oxidation (M))|F}V 1.749 - 11501 1 1.004 108048.5 1.0 12270 5741 18005 HBL1_DMSO_200M_050219_1,18013 HBL1_DMSO_200M_050219_1,18013, False False AQFPESFTV 86.124006 1025.49479979277 16490836.0 18005.0 ENSG00000103657|ENST00000443617|HERC1 7.186708132425944 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18014 86.13 339.0 261760.0 25 0 16937.0 + 27814 PLPTEQQN 8 144 309.490381674979 925.449315625137 3 309.4901611208916 MULTI CID FTMS 0 0 0 18005 223587.890625 0.4400052629821405 24 -2.4484100341796875 9 Unmodified _PLPTEQQN_ REV__ENSG00000141084|ENST00000317506|RANBP10;REV__ENST00000602525.5_1_16:67765330-67840439:-|nuORF;REV__nc|ENSG00000141084|Q6VN20-3|RANBP10 8.593279151180031 0.7721714526254883 3 {I|L}{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 1.7779 0.0 0.0 647.3021246716501 0.0 647.3021246716501 0.0 3.3547064036788754 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.7779 - 51 1 1.004 80853.3 1.0 12271 5741 18005 HBL1_DMSO_200M_050219_1,18014 HBL1_DMSO_200M_050219_1,18014,PLPTEQQN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18015 86.14 567.0 323420.0 25 0 46157.0 + 17768 KQFEPNDFYL 10 174 650.8136907470873 1299.6128285609743 2 650.8140136599541 MULTI CID FTMS 0 0 0 18005 212977.28125 0.0893455708920512 -3 0.3315048217773437 10 Unmodified _KQFEPNDFYL_ ENSG00000101126|ENST00000621696|ADNP 76.82478488871298 0.0187167883027705 3 [{I|L}T][CS]K[NP]D{M(Oxidation (M))|F}Y{I|L} 11 5 + 72.176 0.0 0.0 5.5537 5.5537 80.922 0.0 0.0 0.0 4.155789046631625 16.575773191777927 4.155789046631625 4.155789046631625 0 0.9247425010840048 1.6989700043360187 1.1936726795685342 0.9802046884880936 [{I|L}T][CS]K[NP]D{M(Oxidation (M))|F}Y{I|L};[AG]K{M(Oxidation (M))|F}E[NP]D{M(Oxidation (M))|F}Y{I|L};[AG]{M(Oxidation (M))|F}EK[NP]D{M(Oxidation (M))|F}Y{I|L};[KQ]{M(Oxidation (M))|F}E[NP]D{M(Oxidation (M))|F}Y{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK[NP]D{M(Oxidation (M))|F}Y{I|L};[{I|L}T][CS]KYY{M(Oxidation (M))|F}Y{I|L};[AG]{M(Oxidation (M))|F}KE[NP]D{M(Oxidation (M))|F}Y{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KE[NP]D{M(Oxidation (M))|F}Y{I|L};[NP]D{M(Oxidation (M))|F}[KQ]E{M(Oxidation (M))|F}Y{I|L};[AG]K{M(Oxidation (M))|F}EYY{M(Oxidation (M))|F}Y{I|L} 5.5537;5.2339;5.1966;5.1587;5.1215;5.0477;4.965;4.8898;4.7646;4.7279 -;-;-;+;-;-;-;-;-;- + 5271 1 1.004 139500.1 1.0 12272 5741 18005 HBL1_DMSO_200M_050219_1,18015 HBL1_DMSO_200M_050219_1,18015,KQFEPNDFYL True True KQFEPNDFYL 86.140099 650.814013659954 70935600.0 18005.0 ENSG00000101126|ENST00000621696|ADNP 7.357414086659749 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18016 86.15 582.0 367480.0 25 0 11873.0 + 24756 MPFSVREGINI 11 201 631.8316949909115 1261.648837048623 2 631.8332397341728 MULTI CID FTMS 0 0 0 18005 198273.296875 0.118542845774672 6 -0.5954437255859375 11 Unmodified _MPFSVREGINI_ ENSG00000164163|ENST00000296577|ABCE1 42.83518252547288 0.1687213420692654 3 MP{M(Oxidation (M))|F}SV 5 6 57.705 0.0 0.0 4.5738 0.0 0.0 0.0 697.3664644830686 697.3664644830686 33.4741573867819 0.0 0.0 0.0 0 0.6022338482433752 1.5228787452803376 0.0 0.0 + MP{M(Oxidation (M))|F}SV 4.5738 + + 3981 + 1 1.004 162382.4 1.0 12273 5741 18005 HBL1_DMSO_200M_050219_1,18016 HBL1_DMSO_200M_050219_1,18016,MPFSVREGINI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18017 86.153 120.0 453010.0 25 0 67716.0 + 12631 GVLAHTILGV 10 83 490.300093002225 978.58563307125 2 490.3004028201103 MULTI CID FTMS 0 0 0 18005 189175.765625 0.8214196352366647 -1 0.0755462646484375 12 Unmodified _GVLAHTILGV_ ENSG00000109775|ENST00000264689|UFSP2;ENST00000510206.5_1_4:186321548-186327081:-|nuORF 36.04419817259434 0.1993394420055842 3 {I|L}C(Carbamidomethyl (C)){I|L}{I|L}GV 6 5 26.815 0.0 0.0 2.7402 0.0 0.0 305.19325133472506 0.0 305.19325133472506 0.0 14.051193556838548 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.0 {I|L}C(Carbamidomethyl (C)){I|L}{I|L}GV 2.7402 - 73 + 1 1.004 47144.5 1.0 12274 5741 18005 HBL1_DMSO_200M_050219_1,18017 HBL1_DMSO_200M_050219_1,18017,GVLAHTILGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18018 86.165 637.0 213700.0 25 0 11411.0 + 45603 YVIEDDVNMAI 11 181 641.3052680360354 1280.595983138871 2 641.3058349490166 MULTI CID FTMS 0 0 0 18005 148815.234375 0.4623859082278905 -1 0.0755462646484375 13 Unmodified _YVIEDDVNMAI_ ENSG00000073111|ENST00000265056|MCM2;ENST00000468414.1_1_3:127336783-127340613:+|nuORF;ENST00000474964.5_1_3:127323572-127340613:+|nuORF 60.07390631473393 0.0688452368411198 3 [YV]{I|L}EDDVNMA{I|L} 11 0 + 72.516 0.0 0.0 5.6627 5.6627 77.521 0.0 0.0 0.0 5.550762695790127 10.109860684774333 5.550762695790127 1.7609125905568137 0 0.9604093769761876 2.0 0.3494850021680094 0.4247425010840047 + + [YV]{I|L}EDDVNMA{I|L};[YV]E{I|L}DDVNMA{I|L};[YV]{I|L}EDDNVMA{I|L};[YV]E{I|L}DDNVMA{I|L};[DV]DE{I|L}YVNMA{I|L};[DV]DNKYVNMA{I|L};[DV]DE{I|L}YNVMA{I|L};[DV]DNKYNVMA{I|L};[YV]EHAAYNMA{I|L};[YV]H[DG]YVNMA{I|L} 5.6627;5.5252;5.4276;5.2901;5.2292;5.1526;4.9941;4.9175;4.8666;4.7662 +;-;-;-;-;-;-;-;-;- + 12211 1 1.004 108213.3 1.0 12275 5741 18005 HBL1_DMSO_200M_050219_1,18018 HBL1_DMSO_200M_050219_1,18018,YVIEDDVNMAI True True YVIEDDVNMAI 86.165074 641.305834949017 3597200.75 18005.0 ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2;;ENST00000468414.1_1_3:127336783-127340613:+|nuORF 6.89328145980835 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18019 86.171 303.0 499330.0 25 0 50608.0 + 24433 MGVIVHII 8 152 441.2669222027252 880.5192914722504 2 441.2675353884697 MULTI CID FTMS 0 0 0 18005 135958.1875 0.3309870052211912 -1 0.0755462646484375 14 Unmodified _MGVIVHII_ ENSG00000277791|ENST00000619426|PSMB3 41.81723621529253 0.2038889569391319 3 MGV{I|L}VH{I|L}{I|L} 8 0 + 36.959 0.0 0.0 4.1974 4.1974 70.046 0.0 0.0 0.0 0.2273678964667524 8.008880400303191 0.2273678964667524 0.2273678964667524 0 1.1989700043360187 1.0969100130080565 0.0 0.0 + + MGV{I|L}VH{I|L}{I|L};[H{I|L}]VVGM{I|L}{I|L};[HV]{I|L}VGM{I|L}{I|L};[{I|L}V]HVGM{I|L}{I|L};[H{I|L}]V{I|L}{[CA]|SS}{I|L}{I|L};[{I|L}V]GVHM{I|L}{I|L};{[VA]|[{I|L}G]}VVHM{I|L}{I|L};[HV]{I|L}{I|L}{[CA]|SS}{I|L}{I|L};[{I|L}V]H{I|L}{[CA]|SS}{I|L}{I|L};M{I|L}{I|L}AAH{I|L}{I|L} 4.1974;4.1715;3.2878;3.2611;2.6068;2.5663;2.042;1.7231;1.6964;0.68467 +;-;-;-;-;-;-;-;-;- + 609 + 1 1.004 123694.4 1.0 12276 5741 18005 HBL1_DMSO_200M_050219_1,18019 HBL1_DMSO_200M_050219_1,18019,MGVIVHII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18020 86.182 636.0 110900.0 25 0 12728.0 -1 0 91 1030.1650534537205 3087.4733309613616 3 1030.166796863079 MULTI CID FTMS 0 0 0 18005 135260.765625 0.0519385367861167 -4 0.371185302734375 15 3 QC(Carbamidomethyl (C))[NP]M{NN|[MP]|[D{I|L}]|[EV]} 7 -1 18.996 0.0 0.0 0.61527 0.0 0.0 2211.0522976580346 0.0 2211.0522976580346 0.0 12.085069448096776 0.0 0.0 0 0.0 0.0 0.0 0.0 QC(Carbamidomethyl (C))[NP]M{NN|[MP]|[D{I|L}]|[EV]} 0.61527 - 860 1 1.004 55744.3 1.0 12277 5741 18005 HBL1_DMSO_200M_050219_1,18020 HBL1_DMSO_200M_050219_1,18020, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18021 86.194 685.0 180680.0 25 0 16715.0 -1 DLTFCVSVSL 10 179 570.7829550813793 1139.5513572295586 2 570.7824584841728 MULTI CID FTMS 0 0 0 18005 128325.3125 0.1341244514054159 6 -0.5954437255859375 16 Carbamidomethyl (C) _DLTFC(Carbamidomethyl (C))VSVSL_ ENST00000490838.6_1_20:3190141-3193989:+|nuORF 19.256988751693697 0.5244284437930726 3 {NN|[MP]|[D{I|L}]|[EV]}PD{I|L}Q 6 -1 23.887 0.0 0.0 2.0962 0.0 0.0 0.0 455.19152517807896 455.19152517807896 -4.194699959806986 0.0 -4.194699959806986 0.0 0 0.0 1.0 0.0 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}PD{I|L}Q 2.0962 - 1882 1 1.004 101357.1 1.0 12278 5741 18005 HBL1_DMSO_200M_050219_1,18021 HBL1_DMSO_200M_050219_1,18021,DLTFCVSVSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18022 86.206 641.0 139640.0 25 0 4741.6 + -1 IGEERSLCMIN 11 146 661.3160259877791 1320.617499042358 2 661.3154785037041 MULTI CID FTMS 0 0 0 18005 119007.765625 1.0 0 0.0 17 Carbamidomethyl (C) _IGEERSLC(Carbamidomethyl (C))MIN_ REV__ENSG00000132554|ENST00000360863|RGS22;REV__ENST00000520923.5_1_8:101051146-101092499:-|nuORF;REV__nc|ENSG00000132554|Q8NE09-2|RGS22;REV__nc|ENSG00000132554|Q8NE09-3|RGS22 15.248480904072842 0.7179608125786238 3 {[DA]|[EG]}{I|L}[NS]{M(Oxidation (M))|F}D{I|L}W[{I|L}A]G 12 -1 + 32.378 0.0 0.0 2.4517 2.4517 71.71 0.0 0.0 0.0 4.014093602655464 1.2027413006181895 1.2027413006181895 3.421228796781751 0 0.5 1.2218487496163564 0.0 0.0 {[DA]|[EG]}{I|L}[NS]{M(Oxidation (M))|F}D{I|L}W[{I|L}A]G;{[DA]|[EG]}{I|L}T[HN][Q{I|L}]{I|L}[C(Carbamidomethyl (C))H];{[DA]|[EG]}{I|L}CK[EC]{I|L}W[{I|L}A]G;[WE]{[C(Carbamidomethyl (C))E]|[WC]}CV{I|L}RN{I|L};{NN|[MP]|[D{I|L}]|[EV]}A[NS]{M(Oxidation (M))|F}D{I|L}W[{I|L}A]G;[WE]{[C(Carbamidomethyl (C))E]|[WC]}CV{I|L}RQV;{NN|[MP]|[D{I|L}]|[EV]}AT[HN][Q{I|L}]{I|L}[C(Carbamidomethyl (C))H];{NN|[MP]|[D{I|L}]|[EV]}ACK[EC]{I|L}W[{I|L}A]G;{[DA]|[EG]}{I|L}EW{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}W[Q{I|L}];[W{I|L}]E[Q{I|L}]{[{M(Oxidation (M))|F}C]|[YS]}RN{I|L} 2.4517;2.1927;2.1851;2.0617;1.983;1.8111;1.7239;1.7163;1.655;1.63 -;-;-;-;-;-;-;-;-;- 1080 1 1.004 71487.6 1.0 12279 5741 18005 HBL1_DMSO_200M_050219_1,18022 HBL1_DMSO_200M_050219_1,18022,IGEERSLCMIN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18023 86.218 702.0 223590.0 25 0 18244.0 -1 0 128 1066.5046868705456 2130.994820807892 2 1067.010913074017 MULTI CID FTMS 0 0 0 18005 94992.8515625 0.272903267364777 -6 0.6194305419921875 18 3 [NP]N{I|L}{I|L}T{I|L}[SG]R 10 -1 31.468 0.0 0.0 1.4767 0.0 0.0 0.0 1062.358115509617 1062.358115509617 -1.3611471820679029 0.0 -1.3611471820679029 0.0 0 0.5 0.0 1.110924374808178 0.6307196863200843 [NP]N{I|L}{I|L}T{I|L}[SG]R 1.4767 - 5872 1 1.004 103653.5 1.0 12280 5741 18005 HBL1_DMSO_200M_050219_1,18023 HBL1_DMSO_200M_050219_1,18023, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18024 86.23 679.0 120880.0 25 0 16889.0 19195 LEFRYKKRVYK 11 116 765.4486616622281 1528.882770391256 2 765.4491454958916 MULTI CID FTMS 0 0 0 18005 74379.2890625 0.5124005626178197 3 -0.3554534912109375 19 Unmodified _LEFRYKKRVYK_ ENSG00000162105|ENST00000601538|SHANK2 0.5059551277355931 0.8727608062196215 3 [{I|L}P]VAT{I|L} 6 10 33.365 0.0 0.0 2.1823 0.0 0.0 0.0 931.48668819815 931.48668819815 19.464872211779017 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}P]VAT{I|L} 2.1823 - 220 1 1.004 64616.6 1.0 12281 5741 18005 HBL1_DMSO_200M_050219_1,18024 HBL1_DMSO_200M_050219_1,18024,LEFRYKKRVYK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18025 86.243 687.0 146100.0 25 0 5837.2 -1 0 105 796.7056505359423 2387.0951222080266 3 797.0423461794853 MULTI CID FTMS 0 0 0 18005 83301.1953125 0.39128339066501 -5 0.4839553833007812 20 3 PPPPPP{[QN]|[E{I|L}]|[KN]} 8 -1 39.295 0.0 0.0 1.6461 0.0 0.0 1544.6650377101516 0.0 1544.6650377101516 0.0 11.537661879701773 0.0 0.0 0 0.0 0.0 0.2302046884880938 1.5669015600442575 PPPPPP{[QN]|[E{I|L}]|[KN]} 1.6461 - 4006 + 1 1.004 74927.0 1.0 12282 5741 18005 HBL1_DMSO_200M_050219_1,18025 HBL1_DMSO_200M_050219_1,18025, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18027 86.247 2.3 21337000.0 25 0 2727900.0 + 21050 LPAELINQI 9 65 505.79747336813 1009.58039380306 2 505.7980529665947 MULTI CID FTMS 0 0 0 18026 24672766.0 1.0 0 0.0 1 Unmodified _LPAELINQI_ ENSG00000160877|ENST00000292431|NACC1 34.10243960390752 0.1078313939113124 3 [{I|L}P]AE{I|L}{I|L}NQ{I|L} 9 0 + 52.853 0.0 0.0 5.2352 5.2352 81.617 0.0 0.0 0.0 5.85460729508501 10.330145895351848 5.85460729508501 5.85460729508501 0 0.3182503180159344 2.0 0.3807196863200844 0.0 + + [{I|L}P]AE{I|L}{I|L}NQ{I|L};[PA]E{I|L}{I|L}{I|L}NQ{I|L};[{I|L}P]AE{I|L}{I|L}GGQ{I|L};[PA]{I|L}E{I|L}{I|L}NQ{I|L};[PA]E{I|L}{I|L}{I|L}GGQ{I|L};[PA]{I|L}E{I|L}{I|L}GGQ{I|L};[VP][DV]{I|L}{I|L}NQ{I|L};[VP][DV]{I|L}{I|L}GGQ{I|L} 5.2352;4.6553;4.3231;3.7608;3.7432;2.8487;2.6856;1.7735 +;-;-;-;-;-;-;- + 162 1 1.014 42838.3 1.0 12283 5742 18026 HBL1_DMSO_200M_050219_1,18027 HBL1_DMSO_200M_050219_1,18027,LPAELINQI True True LPAELINQI 86.247486 505.798052966595 411601600.0 18026.0 ENSG00000160877|ENST00000292431|NACC1 3.761130650838216 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18028 86.249 5.7 10905000.0 25 0 2072000.0 + 25710 NIIELVHQV 9 78 532.8088799324801 1063.60320693176 2 532.8090087771416 MULTI CID FTMS 0 0 0 18026 9022559.0 1.0 0 0.0 2 Unmodified _NIIELVHQV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 43.77239144664712 0.0547478964384323 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VH{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 68.846 0.0 0.0 6.4729 6.4729 91.978 0.0 0.0 0.0 39.10393285465774 5.653404750378726 5.653404750378726 18.967137774837617 0 1.1549471895720984 2.0 0.3807196863200844 0.2396518287104437 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VH{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V{[QN]|[E{I|L}]|[KN]}H{[QV]|[N{I|L}]|[RA]|[KV]} 6.4729;4.6896 +;- + 328 + 1 1.014 54794.6 1.0 12284 5742 18026 HBL1_DMSO_200M_050219_1,18028 HBL1_DMSO_200M_050219_1,18028,NIIELVHQV True True NIIELVHQV 86.248665 532.809008777142 363298264.6875 18026.0 chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;;nc|ENSG00000165025|P43405-2|SYK;;ENSG00000165025|ENST00000375754|SYK 8.174189885457357 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18029 86.25 4.7 14765000.0 25 0 1057600.0 + 22255 LPRLTPPVL 9 83 503.326445046479 1004.638337159758 2 503.3271057009697 MULTI CID FTMS 0 0 0 18026 10594256.0 0.3675404602172564 -5 0.5221710205078125 3 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 52.268347100219714 0.0353964759249114 3 [{I|L}P][{I|L}T]RPPV{I|L} 9 2 + 76.717 0.0 0.0 7.6363 7.6363 97.024 0.0 0.0 0.0 18.748162098249 63.52954353761518 18.748162098249 76.7171311638593 0 0.7742275032520141 1.5228787452803376 1.1861818737241734 0.0 [{I|L}P][{I|L}T]RPPV{I|L} 7.6363 - 229 1 1.014 59705.5 1.0 12285 5742 18026 HBL1_DMSO_200M_050219_1,18029 HBL1_DMSO_200M_050219_1,18029,LPRLTPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18030 86.251 15.0 3138900.0 25 0 652510.0 + 28756 PWAPGLSL 8 75 420.7342859599903 839.4540189867805 2 420.7343322634697 MULTI CID FTMS 0 0 0 18026 3963591.0 1.0 0 0.0 4 Unmodified _PWAPGLSL_ ENSG00000225614|ENST00000565624|ZNF469 45.7499826716795 0.1592378023510922 3 [WP]G{I|L}[PA]S{I|L} 8 4 + 59.87 0.0 0.0 7.132 7.132 62.379 0.0 0.0 0.0 20.96910013008056 51.66554318582023 20.96910013008056 0.0 0 0.9247425010840048 1.3979400086720375 0.4247425010840047 0.0 [WP]G{I|L}[PA]S{I|L};[WP]G[PA]{I|L}S{I|L};[WP][QP]{I|L}S{I|L};[WP]G[PA]S{I|L}{I|L};[WP][QP]S{I|L}{I|L};[WP][VP]AAS{I|L};[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]}[PA]S{I|L};[QP][WP]{I|L}S{I|L};[WP][VP][QT]{I|L};{[TV]|[{I|L}S]}[PA][PG]W{I|L} 7.132;7.132;6.3685;6.3266;5.5631;4.5397;4.33;3.5664;3.5392;3.2603 -;-;-;-;-;-;-;-;-;- 127 1 1.014 41083.0 1.0 12286 5742 18026 HBL1_DMSO_200M_050219_1,18030 HBL1_DMSO_200M_050219_1,18030,PWAPGLSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18031 86.252 18.0 1943500.0 25 0 184380.0 + 13919 HVYELLNTI 9 72 551.3004712332556 1100.5863895333111 2 551.3007079958916 MULTI CID FTMS 0 0 0 18026 2408438.25 0.6621985335026471 2 -0.2044677734375 5 Unmodified _HVYELLNTI_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 48.345845343767074 0.0439967357579942 3 [HV]YE{I|L}{I|L}NT{I|L} 9 0 + 60.767 0.0 0.0 5.5213 5.5213 85.163 0.0 0.0 0.0 8.965912507003608 9.335295873671754 8.965912507003608 8.965912507003608 0 0.718765315847925 1.5228787452803376 0.4247425010840047 0.0 + + [HV]YE{I|L}{I|L}NT{I|L};[{I|L}T]N{[CP]|[EA]}{I|L}{I|L}NT{I|L};[HV]YE{I|L}{I|L}GGT{I|L};{[QS]|[NT]}{I|L}{[CP]|[EA]}{I|L}{I|L}NT{I|L};[{I|L}T]N{[CP]|[EA]}{I|L}{I|L}GGT{I|L};[{I|L}T]GG{[CP]|[EA]}{I|L}{I|L}NT{I|L};{[QS]|[NT]}{I|L}{[CP]|[EA]}{I|L}{I|L}GGT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T{[CP]|[EA]}{I|L}{I|L}NT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T{[CP]|[EA]}{I|L}{I|L}GGT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[WD]{I|L}{I|L}NT{I|L} 5.5213;4.7066;4.6846;4.4015;3.8739;3.5784;3.5688;3.4829;2.6502;2.5939 +;-;-;-;-;-;-;-;-;- + 147 1 1.014 32992.3 1.0 12287 5742 18026 HBL1_DMSO_200M_050219_1,18031 HBL1_DMSO_200M_050219_1,18031,HVYELLNTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18032 86.253 22.0 2360500.0 25 0 281310.0 + + 14807 HVLPELLVTA 10 85 546.27717468393 1090.5397964346598 2 546.2778808474541 MULTI CID FTMS 0 0 0 18026 1286049.125 1.0 0 0.0 6 Unmodified _ILEEVDTTAT_ ENSG00000129566|ENST00000262715|TEP1;nc|ENSG00000129566|Q99973-2|TEP1 10.823927491677226 0.6659270209832991 3 {I|L}{I|L}[WY]{I|L}{I|L} 6 -1 24.423 0.0 0.0 2.2396 0.0 0.0 0.0 286.0429387277723 286.0429387277723 4.300150061873108 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {I|L}{I|L}[WY]{I|L}{I|L} 2.2396 - 113 1 1.014 46741.5 1.0 12288 5742 18026 HBL1_DMSO_200M_050219_1,18032 HBL1_DMSO_200M_050219_1,18032,ILEEVDTTAT False False HVLPELLVTA 86.253379 546.277880847454 7686119.5 18026.0 ENSG00000129566|ENST00000262715|TEP1;;nc|ENSG00000129566|Q99973-2|TEP1 1.425130283460021 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18033 86.255 50.0 1118100.0 25 0 100610.0 + 10729 FYFDRDDVAL 10 59 630.7982582950626 1259.5819636569252 2 630.7988769412041 MULTI CID FTMS 0 0 0 18026 1188670.875 0.8666129227605108 -1 0.1509857177734375 7 Unmodified _FYFDRDDVAL_ ENSG00000087086|ENST00000331825|FTL 27.22323531849824 0.3570408936368626 3 {M(Oxidation (M))|F}VY{M(Oxidation (M))|F}A{I|L} 6 6 42.0 0.0 0.0 3.3344 0.0 0.0 501.1832447736344 0.0 501.1832447736344 0.0 19.08030623340529 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}VY{M(Oxidation (M))|F}A{I|L} 3.3344 - 78 1 1.014 48762.8 1.0 12289 5742 18026 HBL1_DMSO_200M_050219_1,18033 HBL1_DMSO_200M_050219_1,18033,FYFDRDDVAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18034 86.256 57.0 1144600.0 25 0 174170.0 14675 IIQSYIINI 9 95 538.8209420469761 1075.6273311607522 2 538.8213378787041 MULTI CID FTMS 0 0 0 18026 1189887.875 1.0 0 0.0 8 Unmodified _IIQSYIINI_ nc|ENSG00000290894|Q96TA0|PCDHB18P 26.020703789607367 0.2001090068861241 3 {I|L}{I|L}[YN]T{I|L}{I|L}QV 9 5 + 41.294 0.0 0.0 3.8391 3.8391 78.853 0.0 0.0 0.0 7.498774732165998 7.632192780232785 7.498774732165998 7.498774732165998 0 0.9876954943324544 2.0 0.3054621874040891 0.0 {I|L}{I|L}[YN]T{I|L}{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KT{I|L}{I|L}QV;[KT]D{I|L}{M(Oxidation (M))|F}{I|L}{I|L}QV;[KT]D{I|L}{I|L}{M(Oxidation (M))|F}{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}[KT]{M(Oxidation (M))|F}{I|L}{I|L}QV;[KT]D{I|L}{I|L}{I|L}{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}[KT]{I|L}{M(Oxidation (M))|F}{I|L}QV;[Q{I|L}][YV]T{I|L}{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}[KT]{I|L}{I|L}{M(Oxidation (M))|F}QV;{[QV]|[N{I|L}]|[RA]|[KV]}[Y{I|L}]T{I|L}{I|L}QV 3.8391;3.1419;3.0569;2.6133;2.5968;2.1656;2.1532;1.7947;1.7055;1.3987 -;-;-;-;-;-;-;-;-;- 337 1 1.014 57161.6 1.0 12290 5742 18026 HBL1_DMSO_200M_050219_1,18034 HBL1_DMSO_200M_050219_1,18034,IIQSYIINI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 18035 86.257 30.0 1397100.0 25 0 221360.0 + 3825 DAIRVFANI 9 77 509.78658941933287 1017.5586259054658 2 509.7862731814384 MULTI CID FTMS 0 0 0 18026 1133308.5 1.0 0 0.0 9 Unmodified _DAIRVFANI_ ENSG00000100129|ENST00000652021|EIF3L;ENST00000495197.1_1_10:38368986-38369799:-|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L 29.84058131909904 0.1515068451768857 3 {[DA]|[EG]}[R{I|L}]V{M(Oxidation (M))|F}AN{I|L} 9 0 + 59.587 0.0 0.0 5.8559 5.8559 87.3 0.0 0.0 0.0 13.930241919876297 14.973024840566469 13.930241919876297 9.208187539523747 0 0.8494850021680094 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}[R{I|L}]V{M(Oxidation (M))|F}AN{I|L};{[DA]|[EG]}[R{I|L}]V{M(Oxidation (M))|F}AGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}NV{M(Oxidation (M))|F}AN{I|L};[KA]QQV{M(Oxidation (M))|F}AN{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}NV{M(Oxidation (M))|F}AGG{I|L};[KA]QQV{M(Oxidation (M))|F}AGG{I|L} 5.8559;4.951;4.4869;3.9682;3.582;3.0633 +;-;-;-;-;- + 88 1 1.014 37807.8 1.0 12291 5742 18026 HBL1_DMSO_200M_050219_1,18035 HBL1_DMSO_200M_050219_1,18035,DAIRVFANI False True DAIRVFANI 86.257382 509.786273181438 9761543.0 18026.0 nc|ENSG00000100129|Q9Y262-2|EIF3L;;ENST00000495197.1_1_10:38368986-38369799:-|nuORF;;ENSG00000100129|ENST00000652021|EIF3L 6.219951629638672 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18036 86.259 56.0 931110.0 25 0 136090.0 + 20590 LLPDNFIAA 9 92 487.2700202963856 972.5254876595712 2 487.2713500857353 MULTI CID FTMS 0 0 0 18026 755945.0 1.0 0 0.0 10 Unmodified _LLPDNFIAA_ ENSG00000139684|ENST00000378720|ESD 21.74664581756881 0.2544899275067181 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DN]{I|L}{I|L}[RV] 8 5 + 29.415 0.0 0.0 3.0246 3.0246 72.656 0.0 0.0 0.0 3.429089686793816 5.484550065040281 3.429089686793816 3.429089686793816 0 0.0 1.0 0.0 1.2302046884880935 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DN]{I|L}{I|L}[RV];YY{M(Oxidation (M))|F}{I|L}{I|L}[RV];{NN|[MP]|[D{I|L}]|[EV]}[MN]{I|L}{I|L}[RV];{I|L}{I|L}YY{M(Oxidation (M))|F}[RV];{[SA]|[TG]}[WE]{I|L}{I|L}[RV];YY{I|L}{I|L}{M(Oxidation (M))|F}[RV];{[SA]|[TG]}{[QG]|[NA]}[SG]V{I|L}[RV] 3.0246;2.672;2.1774;1.6908;0.27517;0.25338;0.12166 -;-;-;-;-;-;- 154 1 1.014 47082.1 1.0 12292 5742 18026 HBL1_DMSO_200M_050219_1,18036 HBL1_DMSO_200M_050219_1,18036,LLPDNFIAA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18037 86.262 142.0 723770.0 25 0 92610.0 + + 29975 SQIDDLYSTIKV 12 117 691.3638410082001 1380.7131290832 2 691.3644286990166 MULTI CID FTMS 0 0 0 18026 694547.9375 1.0 0 0.0 11 Unmodified _QSYQLLHPWLP_ ENST00000513001.5_1_4:185678281-185679089:-|nuORF;ENSG00000151726|ENST00000281455|ACSL1;nc|ENSG00000151726|P33121-2|ACSL1;nc|ENSG00000151726|P33121-3|ACSL1 14.40537977576856 0.7354982482299568 3 {[QS]|[NT]}{I|L}DD{I|L}WT{I|L}V 10 -1 62.276 0.0 0.0 4.5104 0.0 0.0 0.0 207.1141298883422 207.1141298883422 45.83982442816546 0.0 0.0 0.0 0 1.0283773187068794 1.0 0.2887254899964357 0.0 {[QS]|[NT]}{I|L}DD{I|L}WT{I|L}V 4.5104 - 1677 + 1 1.014 82023.4 1.0 12293 5742 18026 HBL1_DMSO_200M_050219_1,18037 HBL1_DMSO_200M_050219_1,18037,QSYQLLHPWLP False False SQIDDLYSTIKV 86.261669 691.364428699017 5474702.0 18026.0 ENST00000513001.5_1_4:185678281-185679089:-|nuORF;;ENSG00000151726|ENST00000281455|ACSL1;;nc|ENSG00000151726|P33121-2|ACSL1;;nc|ENSG00000151726|P33121-3|ACSL1 5.176473220189412 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18038 86.263 72.0 1227800.0 25 0 199880.0 -1 0 93 480.2077297940765 479.2004533274765 1 480.2078735232353 MULTI CID FTMS 0 0 0 18026 680010.0625 0.6576126391278928 -2 0.226531982421875 12 3 {[DA]|[EG]}AG{M(Oxidation (M))|F} 5 -1 {[DA]|[EG]}AG + + 14.604 4.2453 1.3515 3.0476 3.0476 50.293 0.0 0.0 0.0 0.0 -1.7710814827263732 -1.7710814827263732 0.0 0 0.0 0.0 0.0 0.0 {[DA]|[EG]}AG{M(Oxidation (M))|F} 3.0476 - 31 + 1 1.014 70770.5 1.0 12294 5742 18026 HBL1_DMSO_200M_050219_1,18038 HBL1_DMSO_200M_050219_1,18038, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18039 86.265 97.0 654970.0 25 0 94950.0 + 38333 TQLGPPYHILV 11 78 619.3514307462522 1236.6883085593042 2 619.3513061404228 MULTI CID FTMS 0 0 0 18026 660041.625 0.8536407949254902 1 -0.0454940795898437 13 Unmodified _TQLGPPYHILV_ ENSG00000119616|ENST00000341162|FCF1 60.07390631473393 0.0688452368411198 3 [QT]{I|L}G[HA]G{I|L}{I|L} 9 5 65.977 0.0 0.0 5.3349 0.0 0.0 0.0 343.16168443282737 343.16168443282737 53.04486844203227 0.0 0.0 0.0 0 1.5 1.0969100130080565 1.024227503252014 0.2396518287104437 [QT]{I|L}G[HA]G{I|L}{I|L} 5.3349 - 773 1 1.014 54273.8 1.0 12295 5742 18026 HBL1_DMSO_200M_050219_1,18039 HBL1_DMSO_200M_050219_1,18039,TQLGPPYHILV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18040 86.267 65.0 980530.0 25 0 132760.0 8212 EPVHKDSI 8 83 462.7439258842263 923.4732988352524 2 462.7439453005791 MULTI CID FTMS 0 0 0 18026 633191.8125 0.3595355517944147 20 -1.9239959716796875 14 Unmodified _EPVHKDSI_ ENSG00000105877|ENST00000409508|DNAH11 19.438996006549623 0.6237395211498085 3 [{I|L}A]P{I|L} 4 7 38.06 0.0 0.0 4.1214 0.0 0.0 0.0 526.1903170221311 526.1903170221311 24.564856298445576 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.1214 - 62 + 1 1.014 52937.2 1.0 12296 5742 18026 HBL1_DMSO_200M_050219_1,18040 HBL1_DMSO_200M_050219_1,18040,EPVHKDSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18041 86.268 32.0 1199200.0 25 0 88548.0 + 12918 GYPEVALHF 9 74 516.7598526758622 1031.5051524185244 2 516.7616454958916 MULTI CID FTMS 0 0 0 18026 614063.875 0.2750080416929731 -5 0.5221710205078125 15 Unmodified _GYPEVALHF_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 17.11289562659939 0.3734572693229295 3 [YG]PEV[{I|L}A]{[{M(Oxidation (M))|F}H]|[RQ]} 9 0 + 46.188 0.0 0.0 4.4778 4.4778 83.977 0.0 0.0 0.0 16.34520906668314 2.420299789533402 2.420299789533402 11.249387366083 0 0.3054621874040891 2.0 0.0 0.0 + + [YG]PEV[{I|L}A]{[{M(Oxidation (M))|F}H]|[RQ]};[YG]PE[Y{I|L}][YK];[YG][YV]EV[R{M(Oxidation (M))|F}] 4.4778;3.3872;2.341 +;-;- + 86 + 1 1.014 37566.9 1.0 12297 5742 18026 HBL1_DMSO_200M_050219_1,18041 HBL1_DMSO_200M_050219_1,18041,GYPEVALHF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18042 86.27 67.0 788900.0 25 0 87597.0 + + 24592 MPFKCMQL 8 97 499.2368880876433 996.4592232420864 2 499.2375976443291 MULTI CID FTMS 0 0 0 18026 518888.78125 1.0 0 0.0 16 Carbamidomethyl (C) _MLKCC(Carbamidomethyl (C))VML_ ENST00000465280.1_1_3:40499395-40500228:+|nuORF;ENST00000481798.1_1_3:40499446-40503006:+|nuORF;ENSG00000188846|ENST00000396203|RPL14 40.44857923139169 0.2267865117615937 3 MP{M(Oxidation (M))|F} 3 -1 39.654 0.0 0.0 3.9794 0.0 0.0 0.0 618.2755831354124 618.2755831354124 1.0159677630583983 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.0 0.0 MP{M(Oxidation (M))|F} 3.9794 - 431 + 1 1.014 46399.2 1.0 12298 5742 18026 HBL1_DMSO_200M_050219_1,18042 HBL1_DMSO_200M_050219_1,18042,MLKCCVML False False MPFKCMQL 86.269838 499.237597644329 5882157.5 18026.0 ENST00000465280.1_1_3:40499395-40500228:+|nuORF;;ENST00000481798.1_1_3:40499446-40503006:+|nuORF;;ENSG00000188846|ENST00000396203|RPL14 3.785558223724365 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18043 86.274 204.0 753630.0 25 0 129630.0 + 108 AAIPIQINV 9 120 469.78713853805306 937.559724142906 2 469.7871887087822 MULTI CID FTMS 0 0 0 18026 444468.53125 0.5964608962929159 -3 0.3228073120117187 17 Unmodified _AAIPIQINV_ ENSG00000204463|ENST00000676615|BAG6;ENST00000469182.1_1_6:31610750-31613330:-|nuORF;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 36.04419817259434 0.0971720506436186 3 [{I|L}P]Q{I|L}D 5 5 33.232 0.0 0.0 3.5445 0.0 0.0 0.0 368.22998716464366 368.22998716464366 7.060997120194799 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.0 [{I|L}P]Q{I|L}D 3.5445 - 606 1 1.014 119099.5 1.0 12299 5742 18026 HBL1_DMSO_200M_050219_1,18043 HBL1_DMSO_200M_050219_1,18043,AAIPIQINV True True AAIPIQINV 86.273713 469.787188708782 6538938.0 18026.0 nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000204463|P46379-5|BAG6;;ENST00000469182.1_1_6:31610750-31613330:-|nuORF;;nc|ENSG00000204463|P46379-4|BAG6;;nc|ENSG00000204463|P46379-2|BAG6;;ENSG00000204463|ENST00000676615|BAG6 2.533865769704183 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18044 86.277 168.0 478080.0 25 0 74564.0 + 16760 KFQAMDISL 9 116 526.7759744540232 1051.5373959748465 2 526.7758666872978 MULTI CID FTMS 0 0 0 18026 395450.0 1.0 0 0.0 18 Unmodified _KFQAMDISL_ ENSG00000093009|ENST00000263201|CDC45;nc|ENSG00000093009|O75419-2|CDC45;nc|ENSG00000093009|O75419-3|CDC45 65.23502041540118 0.0231836506122253 3 SCKAMD{I|L}S{I|L} 9 3 67.8 0.0 0.0 6.4477 0.0 0.0 85.0898686139664 0.0 85.0898686139664 0.0 37.38093728767447 0.0 0.0 0 0.9247425010840048 0.0 0.5891368308784531 1.3098943791441968 SCKAMD{I|L}S{I|L} 6.4477 - 669 1 1.014 68160.4 1.0 12300 5742 18026 HBL1_DMSO_200M_050219_1,18044 HBL1_DMSO_200M_050219_1,18044,KFQAMDISL True True KFQAMDISL 86.277007 526.775866687298 3132466.75 18026.0 ENSG00000093009|ENST00000263201|CDC45;;nc|ENSG00000093009|O75419-2|CDC45;;nc|ENSG00000093009|O75419-3|CDC45 4.909470717112224 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18045 86.285 456.0 85441.0 25 0 5095.7 -1 0 66 1044.5065639241448 3130.4978623726347 3 1045.173999011517 MULTI CID FTMS 0 0 0 18026 371396.4375 0.5188373266454738 1 -0.0454940795898437 19 3 [MN]MV 4 -1 38.94 0.0 0.0 1.2439 0.0 0.0 0.0 2652.2268164079896 2652.2268164079896 34.3360688456422 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [MN]MV 1.2439 - 22 + 1 1.014 35648.1 1.0 12301 5742 18026 HBL1_DMSO_200M_050219_1,18045 HBL1_DMSO_200M_050219_1,18045, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18046 86.289 182.0 520460.0 25 0 41431.0 -1 SQCESEDLGI 10 130 569.2386768171845 1136.4628007011688 2 569.2395507693291 MULTI CID FTMS 0 0 0 18026 342330.28125 0.5762536390099978 -1 0.1509857177734375 20 Carbamidomethyl (C) _SQC(Carbamidomethyl (C))ESEDLGI_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 26.88365393820708 0.3646707531412818 3 {[QS]|[NT]}{[C(Carbamidomethyl (C))G]|[NC]}GDEG 8 -1 33.763 0.0 0.0 2.9709 0.0 0.0 0.0 343.1609567893126 343.1609567893126 6.596465735123985 0.0 0.0 0.0 0 0.4247425010840047 0.721246399047171 0.2059771852360797 0.7134679910804405 {[QS]|[NT]}{[C(Carbamidomethyl (C))G]|[NC]}GDEG 2.9709 - 427 1 1.014 75359.7 1.0 12302 5742 18026 HBL1_DMSO_200M_050219_1,18046 HBL1_DMSO_200M_050219_1,18046,SQCESEDLGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18048 86.293 8.0 5738100.0 25 0 841970.0 + 14002 IAAWELSL 8 67 451.75254133747273 901.4905297417456 2 451.7528564333916 MULTI CID FTMS 0 0 0 18047 5799063.0 0.2485482650285203 12 -1.1580123901367188 1 Unmodified _IAAWELSL_ REV__ENST00000343827.7_2_15:57511726-57511765:+|nuORF 34.18733598223924 0.3315367612694167 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 -1 57.708 0.0 0.0 6.4014 0.0 0.0 0.0 199.1087373728685 199.1087373728685 38.25720713938118 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 6.4014 - 202 1 1.014 39788.8 1.0 12303 5743 18047 HBL1_DMSO_200M_050219_1,18048 HBL1_DMSO_200M_050219_1,18048,IAAWELSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18049 86.294 15.0 3412700.0 25 0 402420.0 + 22288 LPRVTPFYAV 10 78 581.8343685029253 1161.6541840726504 2 581.8343994021416 MULTI CID FTMS 0 0 0 18047 3339086.5 0.906491166487355 -1 0.0454940795898437 2 Unmodified _LPRVTPFYAV_ ENSG00000115758|ENST00000234111|ODC1 14.40537977576856 0.6058337302021266 3 M{I|L}YAV 5 7 47.206 0.0 0.0 4.0637 0.0 0.0 566.3539551802497 0.0 566.3539551802497 0.0 26.12395659563255 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 M{I|L}YAV 4.0637 - 69 1 1.014 48452.1 1.0 12304 5743 18047 HBL1_DMSO_200M_050219_1,18049 HBL1_DMSO_200M_050219_1,18049,LPRVTPFYAV False True LPRVTPFYAV 86.294158 581.834399402142 124727072.0 18047.0 ENSG00000115758|ENST00000234111|ODC1 7.819751262664795 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18050 86.295 48.0 1252600.0 25 0 118390.0 + 44332 YLPPGFLSA 9 75 482.7602208482151 963.50588876323 2 482.7609130740166 MULTI CID FTMS 0 0 0 18047 1103513.25 0.8118654158865845 1 -0.1589736938476562 3 Unmodified _YLPPGFLSA_ ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-4|SREBF1 30.22481116460888 0.1466181017706357 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{I|L}S 6 5 33.394 0.0 0.0 3.4659 0.0 0.0 0.0 362.1708918117808 362.1708918117808 1.6997844058917622 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{I|L}S 3.4659 - 233 1 1.014 51659.9 1.0 12305 5743 18047 HBL1_DMSO_200M_050219_1,18050 HBL1_DMSO_200M_050219_1,18050,YLPPGFLSA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18051 86.297 58.0 1245600.0 25 0 105650.0 + 10749 FYILTSKEL 9 104 557.3130436855885 1112.6115344379768 2 557.3150512576103 MULTI CID FTMS 0 0 0 18047 608342.75 0.3701068043260151 2 -0.217132568359375 4 Unmodified _FYILTSKEL_ ENSG00000081320|ENST00000263955|STK17B 39.94969957227396 0.0757326808254658 3 RST{I|L}{I|L}[YE] 7 7 45.974 0.0 0.0 4.1321 0.0 0.0 232.12184340644689 0.0 232.12184340644689 0.0 15.323708229389863 0.0 0.0 0 0.7742275032520141 0.0 0.8494850021680094 0.0 RST{I|L}{I|L}[YE] 4.1321 - 353 1 1.014 58797.4 1.0 12306 5743 18047 HBL1_DMSO_200M_050219_1,18051 HBL1_DMSO_200M_050219_1,18051,FYILTSKEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18052 86.299 88.0 1054200.0 25 0 223580.0 + 15426 IPPPVIMV 8 91 433.2642702046081 864.5139874760163 2 433.2646057009697 MULTI CID FTMS 0 0 0 18047 522258.15625 0.4628705870388067 -3 0.2720260620117187 5 Unmodified _IPPPVIMV_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 32.45364647766026 0.3613649037604678 3 [{I|L}P]VPP{I|L}MV 8 2 + 33.849 0.0 0.0 3.9154 3.9154 76.435 0.0 0.0 0.0 10.38872836444014 8.26606256887672 8.26606256887672 4.771212547196626 0 0.5924778212679485 1.3979400086720375 0.0 0.0 [{I|L}P]VPP{I|L}MV;[{I|L}P]VP{I|L}PMV;[{I|L}P]VPPM{I|L}V;[{M(Oxidation (M))|F}T]{I|L}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]PP{I|L}{I|L}MV;[{I|L}P]VPMP{I|L}V;[{M(Oxidation (M))|F}T]{I|L}P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]P{I|L}P{I|L}MV;{[HG]|PP}VP{I|L}{I|L}MV;[VP]{I|L}PP{I|L}MV 3.9154;3.3635;2.9592;2.7137;2.6916;2.4073;2.3655;2.3434;2.2313;2.2313 -;-;-;-;-;-;-;-;-;- 160 1 1.014 78825.1 1.0 12307 5743 18047 HBL1_DMSO_200M_050219_1,18052 HBL1_DMSO_200M_050219_1,18052,IPPPVIMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18053 86.3 57.0 1021600.0 25 0 154300.0 + 4651 DAYVLPKLY 9 90 541.2999781941046 1080.585403455009 2 541.3017455935478 MULTI CID FTMS 0 0 0 18047 522289.8125 0.0018450069164911 34 -3.396697998046875 6 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 30.63653989081413 0.1413794767160703 3 {[DA]|[EG]}YV{I|L}PKY{I|L} 9 2 {[DA]|[EG]}Y + + 34.078 18.416 5.275 3.1537 3.1537 50.486 0.0 0.0 0.0 0.0 15.661837734644587 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {[DA]|[EG]}YV{I|L}PKY{I|L} 3.1537 - 137 + 1 1.014 51944.5 1.0 12308 5743 18047 HBL1_DMSO_200M_050219_1,18053 HBL1_DMSO_200M_050219_1,18053,DAYVLPKLY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18054 86.308 457.0 435310.0 25 0 38323.0 + 35772 SVIPEELISQA 11 176 593.3223363502789 0 593.3223144412041 PEAK CID FTMS 0 0 0 18047 358849.21875 0.7483535722862495 1 -0.1589736938476562 7 Unmodified _SVIPEELISQA_ ENSG00000104517|ENST00000520539|UBR5;ENST00000518145.1_1_8:103358389-103359193:-|nuORF;nc|ENSG00000104517|O95071-2|UBR5 55.50274090549119 0.0267677033215066 3 {I|L}VS{I|L}{I|L}E 6 8 41.573 0.0 0.0 3.5094 0.0 0.0 304.14105834333265 223.0727938287719 527.2138521721046 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.360924374808178 0.0 {I|L}VS{I|L}{I|L}E 3.5094 - 1024 + 1 1.014 149728.2 1.0 12309 5743 18047 HBL1_DMSO_200M_050219_1,18054 HBL1_DMSO_200M_050219_1,18054,SVIPEELISQA True True SVIPEELISQA 86.30839 593.322314441204 5499617.5 18047.0 ENST00000518145.1_1_8:103358389-103359193:-|nuORF;;nc|ENSG00000104517|O95071-2|UBR5;;ENSG00000104517|ENST00000520539|UBR5 6.059376080830892 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18055 86.319 616.0 253720.0 25 0 47748.0 + 30563 REPHLLFLVK 10 136 417.92220515469927 1250.7447860642978 3 417.9221374392509 MULTI CID FTMS 0 0 0 18047 325220.03125 0.2171237506618837 -2 0.1964797973632812 8 Unmodified _REPHLLFLVK_ REV__ENSG00000197261|ENST00000529246|C6orf141;REV__ENST00000424426.1_1_6:49518739-49519689:+|nuORF 3.2813086475875832 0.7114585191678878 3 {I|L} 1 -1 10.278 0.0 0.0 0.82172 0.0 0.0 1119.6496913150777 0.0 1119.6496913150777 0.0 4.793036574208873 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.82172 + + 18 + 1 1.014 128173.5 1.0 12310 5743 18047 HBL1_DMSO_200M_050219_1,18055 HBL1_DMSO_200M_050219_1,18055,REPHLLFLVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18056 86.324 236.0 333560.0 25 0 46241.0 + 25297 NAFDGPITI 9 120 474.24548810792027 0 474.2457458376884 PEAK CID FTMS 0 0 0 18047 301933.5 1.0 0 0.0 9 Unmodified _NAFDGPITI_ ENSG00000026508|ENST00000428726|CD44;ENST00000525209.5_1_11:35208413-35222108:+|nuORF;ENST00000531118.5_1_11:35198231-35211698:+|nuORF;nc|ENSG00000026508|P16070-10|CD44;nc|ENSG00000026508|P16070-11|CD44;nc|ENSG00000026508|P16070-12|CD44;nc|ENSG00000026508|P16070-13|CD44;nc|ENSG00000026508|P16070-14|CD44;nc|ENSG00000026508|P16070-15|CD44;nc|ENSG00000026508|P16070-16|CD44;nc|ENSG00000026508|P16070-17|CD44;nc|ENSG00000026508|P16070-18|CD44;nc|ENSG00000026508|P16070-3|CD44;nc|ENSG00000026508|P16070-4|CD44;nc|ENSG00000026508|P16070-5|CD44;nc|ENSG00000026508|P16070-6|CD44;nc|ENSG00000026508|P16070-7|CD44;nc|ENSG00000026508|P16070-8|CD44;nc|ENSG00000026508|P16070-9|CD44 30.63653989081413 0.1077493867305487 3 T 1 8 8.9794 0.0 0.0 0.94872 0.0 0.0 714.333660076389 128.07207666568596 842.405736742075 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + T 0.94872 + + 98 + 1 1.014 64743.9 1.0 12311 5743 18047 HBL1_DMSO_200M_050219_1,18056 HBL1_DMSO_200M_050219_1,18056,NAFDGPITI True True NAFDGPITI 86.323557 474.245745837688 2082481.875 18047.0 nc|ENSG00000026508|P16070-12|CD44;;nc|ENSG00000026508|P16070-6|CD44;;ENSG00000026508|ENST00000428726|CD44;;nc|ENSG00000026508|P16070-14|CD44;;nc|ENSG00000026508|P16070-5|CD44;;nc|ENSG00000026508|P16070-15|CD44;;nc|ENSG00000026508|P16070-10|CD44;;nc|ENSG00000026508|P16070-13|CD44;;nc|ENSG00000026508|P16070-7|CD44;;nc|ENSG00000026508|P16070-11|CD44;;nc|ENSG00000026508|P16070-4|CD44;;nc|ENSG00000026508|P16070-16|CD44;;ENST00000531118.5_1_11:35198231-35211698:+|nuORF;;nc|ENSG00000026508|P16070-18|CD44;;nc|ENSG00000026508|P16070-3|CD44;;nc|ENSG00000026508|P16070-17|CD44;;nc|ENSG00000026508|P16070-8|CD44;;nc|ENSG00000026508|P16070-9|CD44;;ENST00000525209.5_1_11:35208413-35222108:+|nuORF 4.097682952880859 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18057 86.328 234.0 656820.0 25 0 64727.0 + 21453 LPHPIIVSI 9 175 494.7773979104296 987.5402428876592 2 494.7767822146416 MULTI CID FTMS 0 0 0 18047 258363.984375 0.6415116468270395 -2 0.1964797973632812 10 Unmodified _LPHLPPDSL_ ENSG00000204634|ENST00000409318|TBC1D8;nc|ENSG00000204634|O95759|TBC1D8;nc|ENSG00000204634|O95759-2|TBC1D8 24.67388899826682 0.2172451872415813 3 {[TV]|[{I|L}S]}ERS 5 7 23.901 0.0 0.0 2.4202 0.0 0.0 0.0 412.2223467297093 412.2223467297093 7.447274948966935 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}ERS 2.4202 - 1726 1 1.014 117304.4 1.0 12312 5743 18047 HBL1_DMSO_200M_050219_1,18057 HBL1_DMSO_200M_050219_1,18057,LPHLPPDSL False False LPHPIIVSI 86.327944 494.776782214642 8880624.0 18047.0 ENSG00000204634|ENST00000409318|TBC1D8;;nc|ENSG00000204634|O95759|TBC1D8;;nc|ENSG00000204634|O95759-2|TBC1D8 2.384758313496908 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18058 86.337 541.0 359440.0 25 0 46354.0 19539 LFPPIQASCLS 11 168 588.3111369747654 1174.6077210163307 2 588.3151733279228 MULTI CID FTMS 0 0 0 18047 256904.625 0.2998569387757633 7 -0.6972579956054688 11 Unmodified _LFPPIQASCLS_ ENSG00000277481|ENST00000620267|PKD1L3 19.361941925380144 0.6323962752489956 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}T[C(Carbamidomethyl (C))Q]PS{I|L} 10 6 + 42.887 0.0 0.0 3.6512 3.6512 72.543 0.0 0.0 0.0 4.013198261392816 2.730012720637376 2.730012720637376 2.653631197717985 0 0.3807196863200844 1.2218487496163564 0.6022338482433752 0.3494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}T[C(Carbamidomethyl (C))Q]PS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPD{I|L}HHS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}T[C(Carbamidomethyl (C))Q]PTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PT[C(Carbamidomethyl (C))Q]PS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}YSPP{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPD{I|L}P{M(Oxidation (M))|F}MV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPD{I|L}HHTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PT[C(Carbamidomethyl (C))Q]PTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPD{I|L}P{[ET]|[MV]}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[QT]{[WS]|[C(Carbamidomethyl (C)){I|L}]}PS{I|L} 3.6512;3.4253;3.4188;3.3949;3.3095;3.216;3.1929;3.1625;3.0432;3.0126 -;-;-;-;-;-;-;-;-;- 1601 + 1 1.014 151701.9 1.0 12313 5743 18047 HBL1_DMSO_200M_050219_1,18058 HBL1_DMSO_200M_050219_1,18058,LFPPIQASCLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18059 86.351 800.0 312100.0 25 0 15546.0 20680 LLRKFIKL 8 251 344.2430668247838 0 344.2430602908134 PEAK CID FTMS 0 0 0 18047 213773.546875 0.6879662117069297 2 -0.217132568359375 12 Unmodified _LLRKFIKL_ ENSG00000079337|ENST00000449771|RAPGEF3;ENST00000488250.5_1_12:48131352-48135452:-|nuORF;nc|ENSG00000079337|O95398-3|RAPGEF3 3.5964929083625545 0.5870767149301087 3 S 1 8 5.4846 0.0 0.0 0.79895 0.0 0.0 514.350027226913 82.06696497134999 596.416992198263 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.79895 - 12 + 1 1.014 195365.8 0.9800000190734864 12314 5743 18047 HBL1_DMSO_200M_050219_1,18059 HBL1_DMSO_200M_050219_1,18059,LLRKFIKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18060 86.361 553.0 308290.0 25 0 31450.0 -1 0 141 613.3875132578864 612.3802367912864 1 613.3884765505791 MULTI CID FTMS 0 0 0 18047 199439.796875 1.0 0 0.0 13 3 {[TV]|[{I|L}S]}VCP 5 -1 21.366 0.0 0.0 3.4891 0.0 0.0 0.0 110.11371629823552 110.11371629823552 8.892023496595773 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.742147883937094 0.0 {[TV]|[{I|L}S]}VCP 3.4891 - 254 1 1.014 126001.2 1.0 12315 5743 18047 HBL1_DMSO_200M_050219_1,18060 HBL1_DMSO_200M_050219_1,18060, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18061 86.373 627.0 495610.0 25 0 39161.0 + 35690 SVFNIKLVQA 10 233 559.8327688888409 1117.6509848444816 2 559.8333618044853 MULTI CID FTMS 0 0 0 18047 174151.625 0.6415663614588545 -1 0.0454940795898437 14 Unmodified _SVFNIKLVQA_ ENSG00000137807|ENST00000679126|KIF23;nc|ENSG00000137807|Q02241-2|KIF23;nc|ENSG00000137807|Q02241-3|KIF23;nc|ENSG00000137807|Q02241|KIF23 70.33199760932243 0.018925923965799 3 [VS]{M(Oxidation (M))|F}N{I|L} 5 5 48.148 0.0 0.0 4.308 0.0 0.0 0.0 554.3310640924436 554.3310640924436 -0.2817427859786292 0.0 -0.2817427859786292 0.0 0 1.079689690656103 2.0 0.0 0.566901560044258 + [VS]{M(Oxidation (M))|F}N{I|L} 4.308 + + 7414 + 1 1.014 232896.3 1.0 12316 5743 18047 HBL1_DMSO_200M_050219_1,18061 HBL1_DMSO_200M_050219_1,18061,SVFNIKLVQA True True SVFNIKLVQA 86.373117 559.833361804485 2285296.75 18047.0 nc|ENSG00000137807|Q02241|KIF23;;nc|ENSG00000137807|Q02241-3|KIF23;;nc|ENSG00000137807|Q02241-2|KIF23;;ENSG00000137807|ENST00000679126|KIF23 5.913536230723064 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18062 86.385 679.0 351350.0 25 0 63919.0 + 16769 KGAARGGG 8 150 673.376837342885 672.3695608762849 1 673.3786498904228 MULTI CID FTMS 0 0 0 18047 158313.328125 0.4424647709138841 -1 0.0454940795898437 15 Unmodified _KGAARGGG_ REV__ENST00000485324.1_1_X:152959425-152959824:+|nuORF 0.0 0.8243325171867699 3 {[QN]|[E{I|L}]|[KN]}DA{I|L}{I|L} 6 -1 + 66.352 0.0 0.0 9.8684 9.8684 84.063 0.0 0.0 0.0 0.6693476257706124 16.197887582883936 0.6693476257706124 0.6693476257706124 0 1.0189301784845295 1.0969100130080565 1.2797966019298022 0.0 {[QN]|[E{I|L}]|[KN]}DA{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}A{I|L}{I|L};[{I|L}A]DE{I|L}{I|L};[{I|L}A]ED{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}EA{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}D{I|L}A{I|L};{[QN]|[E{I|L}]|[KN]}AD{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{I|L}{I|L}{I|L} 9.8684;9.7689;9.7683;9.2293;8.8643;8.2456;7.7545;7.7066;7.655;7.4365 -;-;-;-;-;-;-;-;-;- 590 1 1.014 173581.7 1.0 12317 5743 18047 HBL1_DMSO_200M_050219_1,18062 HBL1_DMSO_200M_050219_1,18062,KGAARGGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18063 86.396 658.0 180450.0 25 0 12169.0 + -1 YWCQYFVYFWL 11 132 837.8732986981495 1673.7320444630989 2 837.8723022341728 MULTI CID FTMS 0 0 0 18047 138656.84375 0.90967034688286 1 -0.1589736938476562 16 Carbamidomethyl (C) _YWC(Carbamidomethyl (C))QYFVYFWL_ REV__L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|122|1|anti-sense 0.3506318815782774 0.8734936314171269 3 QQDA{M(Oxidation (M))|F}YQ[{I|L}V] 9 -1 46.648 0.0 0.0 2.7871 0.0 0.0 563.1983515438916 0.0 563.1983515438916 0.0 29.4812969097282 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 QQDA{M(Oxidation (M))|F}YQ[{I|L}V] 2.7871 - 1512 1 1.014 83856.1 1.0 12318 5743 18047 HBL1_DMSO_200M_050219_1,18063 HBL1_DMSO_200M_050219_1,18063,YWCQYFVYFWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18064 86.411 758.0 204730.0 25 0 73500.0 -1 0 100 1063.5082201649834 3187.50283109515 3 1064.176440417767 MULTI CID FTMS 0 0 0 18047 113820.4140625 0.8401141733114378 1 -0.1589736938476562 17 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHQV 9 -1 35.332 0.0 0.0 1.1085 0.0 0.0 0.0 2138.9020335977643 2138.9020335977643 15.779390146791728 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6694451763165201 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHQV 1.1085 - 2076 1 1.014 104990.0 1.0 12319 5743 18047 HBL1_DMSO_200M_050219_1,18064 HBL1_DMSO_200M_050219_1,18064, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18065 86.422 672.0 183640.0 25 0 65747.0 + + 28059 GVVSYPFDTV 10 72 1080.5261146580262 1079.5188381914263 1 1083.535449206829 MULTI CID FTMS 0 0 0 18047 115369.75 0.4452982261862108 -4 0.3683013916015625 18 Unmodified _PPFGYRICQ_ ENSG00000169100|ENST00000381401|SLC25A6 15.847184025352805 0.4077185912009129 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DTVVY{M(Oxidation (M))|F} 8 -1 37.692 0.0 0.0 3.4916 0.0 0.0 0.0 108.05079554910132 108.05079554910132 11.181810190170404 0.0 0.0 0.0 0 0.0 0.0 0.9802046884880936 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DTVVY{M(Oxidation (M))|F} 3.4916 - 914 1 1.014 82219.1 1.0 12320 5743 18047 HBL1_DMSO_200M_050219_1,18065 HBL1_DMSO_200M_050219_1,18065,PPFGYRICQ False False GVVSYPFDTV 86.422479 1083.53544920683 4192237.25 18047.0 ENSG00000169100|ENST00000381401|SLC25A6 1.949050510923068 1.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18066 86.434 691.0 171280.0 25 0 17868.0 -1 0 143 657.6730837853221 1969.997421956166 3 657.6767455935478 MULTI CID FTMS 0 0 0 18047 109162.1171875 0.5475216338183099 -10 0.9407577514648438 19 3 [{I|L}T]T{I|L}S{I|L}P 7 -1 50.679 0.0 0.0 2.5725 0.0 0.0 0.0 1241.5306019192883 1241.5306019192883 22.060793020973023 0.0 0.0 0.0 0 0.5 2.0 0.3494850021680094 0.0 [{I|L}T]T{I|L}S{I|L}P 2.5725 - 970 1 1.014 92438.2 1.0 12321 5743 18047 HBL1_DMSO_200M_050219_1,18066 HBL1_DMSO_200M_050219_1,18066, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18067 86.448 687.0 61265.0 25 0 5001.2 -1 0 73 1086.295214831829 0 1086.295214831829 PEAK CID FTMS 0 0 0 -1 0 20 3 TV{I|L}VVTN 7 -1 50.878 0.0 0.0 2.344 0.0 0.0 1202.0285267322145 239.1037996881469 1441.132326420361 0.0 0.0 0.0 0.0 0 0.0 0.0 2.341129063296272 0.0 TV{I|L}VVTN 2.344 - 406 + 1 1.014 37034.3 1.0 12322 5743 18047 HBL1_DMSO_200M_050219_1,18067 HBL1_DMSO_200M_050219_1,18067, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18069 86.452 25.0 1564900.0 25 0 144760.0 + 22283 LPRTIFPTSTI 11 73 623.3642391962327 1244.7139254592653 2 623.3642455935478 MULTI CID FTMS 0 0 0 18068 1730418.25 0.4702905618443979 2 -0.1915283203125 1 Unmodified _LPRTIFPTSTI_ ENSG00000139218|ENST00000369367|SCAF11;ENST00000546534.1_1_12:46325244-46326951:-|nuORF 37.07464296494664 0.257459615863268 3 {M(Oxidation (M))|F}[TP]ST{I|L} 6 5 34.398 0.0 0.0 2.7635 0.0 0.0 580.3698478450622 0.0 580.3698478450622 0.0 10.21652514092061 0.0 0.0 0 1.5924778212679485 0.0 0.8807196863200843 0.0 + {M(Oxidation (M))|F}[TP]ST{I|L} 2.7635 + + 190 1 1.03 39451.3 1.0 12323 5744 18068 HBL1_DMSO_200M_050219_1,18069 HBL1_DMSO_200M_050219_1,18069,LPRTIFPTSTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18070 86.453 46.0 1353400.0 25 0 169590.0 + 15577 IPYLVVKV 8 79 465.8047698798843 929.5949868265686 2 465.8050414919853 MULTI CID FTMS 0 0 0 18068 965568.4375 0.3674914482466087 2 -0.1915283203125 2 Unmodified _IPYLVVKV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 53.57557251787612 0.1224291679108181 3 {I|L}PY{I|L}VVKV 8 0 + 73.128 0.0 0.0 7.8667 7.8667 96.158 0.0 0.0 0.0 45.84830150985134 11.893426046896494 11.893426046896494 23.69911285071794 0 1.1505149978319906 1.6989700043360187 0.0 0.0 + + {I|L}PY{I|L}VVKV;{I|L}PY{I|L}[{I|L}A][K{I|L}] 7.8667;5.3173 +;- + 164 + 1 1.03 55360.1 1.0 12324 5744 18068 HBL1_DMSO_200M_050219_1,18070 HBL1_DMSO_200M_050219_1,18070,IPYLVVKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18071 86.454 22.0 2110100.0 25 0 466070.0 + 17769 KQFEPNDFYL 10 56 650.8136907470873 1299.6128285609743 2 650.8141967654228 MULTI CID FTMS 0 0 0 18068 2383747.5 1.0 0 0.0 3 Unmodified _KQFEPNDFYL_ ENSG00000101126|ENST00000621696|ADNP 31.26834338654808 0.266153677697784 3 EYY{M(Oxidation (M))|F}Y{I|L} 6 6 30.15 0.0 0.0 2.3199 0.0 0.0 403.2225514142594 0.0 403.2225514142594 0.0 13.952424927286842 0.0 0.0 0 1.242992819099939 0.0 0.805462187404089 0.0 EYY{M(Oxidation (M))|F}Y{I|L} 2.3199 - 55 1 1.03 42009.5 1.0 12325 5744 18068 HBL1_DMSO_200M_050219_1,18071 HBL1_DMSO_200M_050219_1,18071,KQFEPNDFYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18072 86.456 62.0 1184300.0 25 0 76171.0 -1 0 76 1030.1650534537205 3087.4733309613616 3 1030.166674792767 MULTI CID FTMS 0 0 0 18068 2136798.75 0.8205054878152387 -1 0.1589736938476562 4 3 [NP]{I|L}NMNPQD 9 -1 29.843 0.0 0.0 0.96658 0.0 0.0 0.0 2060.9771512231214 2060.9771512231214 2.3957751657678763 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}NMNPQD 0.96658 - 1113 1 1.03 58874.8 1.0 12326 5744 18068 HBL1_DMSO_200M_050219_1,18072 HBL1_DMSO_200M_050219_1,18072, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18073 86.457 38.0 1359200.0 25 0 154450.0 + 36171 SVVKVLTEL 9 91 494.3081368616121 0 494.3080932497978 PEAK CID FTMS 0 0 0 18068 1311009.625 0.8880663572400205 -1 0.1589736938476562 5 Unmodified _SVVKVLTEL_ ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-2|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428|TCOF1 21.53697664764585 0.1871382778112851 3 VET 3 7 11.995 0.0 0.0 1.2158 0.0 0.0 317.1955451081868 337.22568689517817 654.4212320033649 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 VET 1.2158 - 177 + 1 1.03 45736.8 1.0 12327 5744 18068 HBL1_DMSO_200M_050219_1,18073 HBL1_DMSO_200M_050219_1,18073,SVVKVLTEL False True SVVKVLTEL 86.457147 494.308093249798 7260728.5 18068.0 nc|ENSG00000070814|Q13428-7|TCOF1;;nc|ENSG00000070814|Q13428-4|TCOF1;;ENSG00000070814|ENST00000643257|TCOF1;;nc|ENSG00000070814|Q13428-2|TCOF1;;nc|ENSG00000070814|Q13428|TCOF1;;nc|ENSG00000070814|Q13428-6|TCOF1;;nc|ENSG00000070814|Q13428-8|TCOF1 0.1656447649002075 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18074 86.459 60.0 1419300.0 25 0 151160.0 + 32936 SELFQESL 8 100 476.73468053466337 951.4548081361268 2 476.7348205447197 MULTI CID FTMS 0 0 0 18068 1194693.25 0.815170951379029 -1 0.1589736938476562 6 Unmodified _SELFQESL_ REV__ENSG00000163840|ENST00000296161|DTX3L 32.116972079565 0.368454113111938 3 {[DA]|[EG]}VYG 5 -1 27.157 0.0 0.0 2.8543 0.0 0.0 0.0 443.21427403872366 443.21427403872366 5.945735952256026 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2887254899964357 0.0 {[DA]|[EG]}VYG 2.8543 - 329 1 1.03 69653.0 1.0 12328 5744 18068 HBL1_DMSO_200M_050219_1,18074 HBL1_DMSO_200M_050219_1,18074,SELFQESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18075 86.46 64.0 843310.0 25 0 187820.0 -1 VVLIKNVCLPP 11 60 626.3801458917122 1250.7457388502244 2 626.3802978396416 MULTI CID FTMS 0 0 0 18068 910345.6875 0.8580119965320261 -1 0.1589736938476562 7 Carbamidomethyl (C) _VVLIKNVC(Carbamidomethyl (C))LPP_ ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4 1.4819007175156935 0.86815623132643 3 {I|L} 1 -1 10.181 0.0 0.0 0.814 0.0 0.0 1119.6507356537384 0.0 1119.6507356537384 0.0 5.576967093510348 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.814 + + 5 + 1 1.03 48773.7 1.0 12329 5744 18068 HBL1_DMSO_200M_050219_1,18075 HBL1_DMSO_200M_050219_1,18075,VVLIKNVCLPP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18076 86.461 35.0 1245700.0 25 0 77638.0 -1 QLLFLCQGV 9 88 539.2902976286888 1076.5660423241775 2 539.2910034060478 MULTI CID FTMS 0 0 0 18068 919810.875 0.8759194283641032 -1 0.1589736938476562 8 Carbamidomethyl (C) _QLLFLC(Carbamidomethyl (C))QGV_ ENST00000481629.1_2_3:52028657-52028771:-|nuORF 11.640296217721598 0.521594087909532 3 [Q{I|L}][{M(Oxidation (M))|F}V]W{M(Oxidation (M))|F} 6 -1 24.384 0.0 0.0 2.265 0.0 0.0 0.0 253.1307161920532 253.1307161920532 8.899699876253777 0.0 0.0 0.0 0 0.25 1.6989700043360187 0.0 0.0 [Q{I|L}][{M(Oxidation (M))|F}V]W{M(Oxidation (M))|F} 2.265 - 87 + 1 1.03 39984.7 1.0 12330 5744 18068 HBL1_DMSO_200M_050219_1,18076 HBL1_DMSO_200M_050219_1,18076,QLLFLCQGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18077 86.464 116.0 811090.0 25 0 133540.0 + 21541 LPIVTPAL 8 98 412.2680075726272 822.5214622120543 2 412.2681457400322 MULTI CID FTMS 0 0 0 18068 813466.875 0.6866581158000895 1 -0.0581588745117187 9 Unmodified _LPIVTPAL_ ENSG00000182481|ENST00000330459|KPNA2 48.847882008758354 0.1446664477986014 3 [{I|L}P]VT{I|L} 5 3 49.626 0.0 0.0 6.0334 0.0 0.0 0.0 296.1609175556068 296.1609175556068 32.71505167644483 0.0 0.0 0.0 0 0.6694451763165201 1.6989700043360187 0.8494850021680094 0.0 [{I|L}P]VT{I|L} 6.0334 - 157 1 1.03 79041.5 1.0 12331 5744 18068 HBL1_DMSO_200M_050219_1,18077 HBL1_DMSO_200M_050219_1,18077,LPIVTPAL False True LPIVTPAL 86.463803 412.268145740032 41241330.0 18068.0 ENSG00000182481|ENST00000330459|KPNA2 2.850053588549296 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18078 86.468 195.0 741830.0 25 0 107040.0 + 20952 LNHTNENV 8 107 470.7263124699047 939.4380720066094 2 470.7264282107353 MULTI CID FTMS 0 0 0 18068 790961.625 0.1624565828608821 22 -2.2132720947265625 10 Unmodified _LNHTNENV_ REV__ENSG00000196704|ENST00000359904|AMZ2;REV__ENST00000578175.5_1_17:66246915-66252971:+|nuORF;REV__ENST00000585050.5_1_17:66245218-66252971:+|nuORF 24.67388899826682 0.525179942228231 3 {I|L}A{I|L} 3 -1 46.075 0.0 0.0 4.9045 0.0 0.0 0.0 639.2107291918144 639.2107291918144 17.033773764119488 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {I|L}A{I|L} 4.9045 - 274 + 1 1.03 114654.5 1.0 12332 5744 18068 HBL1_DMSO_200M_050219_1,18078 HBL1_DMSO_200M_050219_1,18078,LNHTNENV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18079 86.469 82.0 1005400.0 25 0 82240.0 + 29468 QLIKELPEL 9 123 541.8263651894675 1081.638177445735 2 541.8268310427666 MULTI CID FTMS 0 0 0 18068 604360.375 0.984544416754806 -1 0.1589736938476562 11 Unmodified _QLIKELPEL_ ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 13.90604991867851 0.4602628045680013 3 [Q{I|L}]{I|L}[{M(Oxidation (M))|F}E]{I|L}{I|L}P 8 4 24.988 0.0 0.0 2.3102 0.0 0.0 0.0 125.07232080631094 125.07232080631094 3.2715993108250565 0.0 0.0 0.0 0 0.2302046884880938 1.3979400086720375 0.0 0.0 [Q{I|L}]{I|L}[{M(Oxidation (M))|F}E]{I|L}{I|L}P 2.3102 - 423 + 1 1.03 68426.7 1.0 12333 5744 18068 HBL1_DMSO_200M_050219_1,18079 HBL1_DMSO_200M_050219_1,18079,QLIKELPEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18080 86.472 138.0 683130.0 25 0 70695.0 + 1718 ALPPVLTTV 9 91 455.784122799429 909.553692665658 2 455.7844421267509 MULTI CID FTMS 0 0 0 18068 544785.5625 0.449280723568957 -1 0.1589736938476562 12 Unmodified _ALPPVLTTV_ ENSG00000155506|ENST00000518297|LARP1 46.92087301778293 0.0471210510596396 3 [VP]P{I|L}TTV[{I|L}A] 9 5 + 34.631 0.0 0.0 3.8075 3.8075 74.046 0.0 0.0 0.0 2.006594505464186 8.192219776465357 2.006594505464186 3.010299956639816 0 0.0 0.0 1.5 0.0 [VP]P{I|L}TTV[{I|L}A];[VP]{I|L}PTTV[{I|L}A];{[HG]|PP}V{I|L}TTV[{I|L}A];[{I|L}A]PVVEV[{I|L}A];[VG]{I|L}[{I|L}P]EV[{I|L}A];[VP]{I|L}{[VA]|[{I|L}G]}EV[{I|L}A] 3.8075;3.4765;3.4436;3.1439;0.63347;0.59808 -;-;-;-;-;- 483 1 1.03 76833.4 1.0 12334 5744 18068 HBL1_DMSO_200M_050219_1,18080 HBL1_DMSO_200M_050219_1,18080,ALPPVLTTV True True ALPPVLTTV 86.472191 455.784442126751 10789970.0 18068.0 ENSG00000155506|ENST00000518297|LARP1 0.7129343350728353 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18081 86.481 502.0 499560.0 25 0 69685.0 -1 ALLETYCA 8 191 314.15321840409246 939.4378258124774 3 314.1530334353447 MULTI CID FTMS 0 0 0 18068 534006.375 0.1396812128265058 22 -2.2132720947265625 13 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 30.63653989081413 0.3996269429323407 3 A{I|L}{I|L}E 4 -1 61.832 0.0 0.0 6.5818 0.0 0.0 0.0 510.16657434635 510.16657434635 38.16011607352703 0.0 0.0 0.0 0 0.3252574989159953 2.0 1.086696871556164 0.0 A{I|L}{I|L}E 6.5818 + + 278 + 1 1.03 201903.3 1.0 12335 5744 18068 HBL1_DMSO_200M_050219_1,18081 HBL1_DMSO_200M_050219_1,18081,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18082 86.483 70.0 985960.0 25 0 93025.0 + 30024 QTPEFFQDV 9 99 555.7584846907921 1109.502416448384 2 555.7589599490166 MULTI CID FTMS 0 0 0 18068 520451.78125 0.2029898559048024 -3 0.3554534912109375 14 Unmodified _QTPEFFQDV_ ENSG00000169710|ENST00000306749|FASN 41.8396318013385 0.0653578398400075 3 {[QN]|[E{I|L}]|[KN]}M{M(Oxidation (M))|F}QT 6 6 33.351 0.0 0.0 3.006 0.0 0.0 0.0 357.1369739037154 357.1369739037154 10.058057693759626 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.5 0.0 {[QN]|[E{I|L}]|[KN]}M{M(Oxidation (M))|F}QT 3.006 - 643 1 1.03 58215.2 1.0 12336 5744 18068 HBL1_DMSO_200M_050219_1,18082 HBL1_DMSO_200M_050219_1,18082,QTPEFFQDV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18083 86.485 78.0 874320.0 25 0 111620.0 + 29311 QILDGIHYL 9 107 536.2959090846191 1070.577265236038 2 536.2957641482353 MULTI CID FTMS 0 0 0 18068 478904.15625 1.0 0 0.0 15 Unmodified _QILDGIHYL_ ENSG00000132964|ENST00000381527|CDK8;ENSG00000155111|ENST00000368911|CDK19;nc|ENSG00000132964|P49336-2|CDK8;nc|ENSG00000155111|Q9BWU1-2|CDK19 50.855029805455786 0.0384952370514206 3 [Q{I|L}]{I|L}DG{I|L}HY{I|L} 9 0 + 58.196 0.0 0.0 5.436 5.436 81.078 0.0 0.0 0.0 35.17581420512853 12.98332479720628 12.98332479720628 4.701140738196017 0 0.5074908058443608 2.0 0.4247425010840047 0.0 + + [Q{I|L}]{I|L}DG{I|L}HY{I|L};[Q{I|L}]AA[KQ]HY{I|L};[Q{I|L}]{I|L}{[RE]|[WV]}HY{I|L};[Q{I|L}]AH{I|L}[DV]Y{I|L};[Q{I|L}]{I|L}DG{I|L}[WQ]V;[Q{I|L}]AA[KQ][WQ]V;[Q{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[K{I|L}]Y{I|L};[Q{I|L}]{I|L}[HA][DV]Y{I|L};[Q{I|L}]{I|L}{[RE]|[WV]}[WQ]V;[Q{I|L}]AH{I|L}[YE]VV 5.436;4.9969;4.6265;4.0455;3.7505;3.3113;3.0407;2.972;2.941;2.5583 +;-;-;-;-;-;-;-;-;- + 344 + 1 1.03 58779.9 1.0 12337 5744 18068 HBL1_DMSO_200M_050219_1,18083 HBL1_DMSO_200M_050219_1,18083,QILDGIHYL True True QILDGIHYL 86.484524 536.295764148235 6846245.0 18068.0 ENSG00000132964|ENST00000381527|CDK8;;nc|ENSG00000155111|Q9BWU1-2|CDK19;;nc|ENSG00000132964|P49336-2|CDK8;;ENSG00000155111|ENST00000368911|CDK19 4.640620470046997 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18084 86.486 53.0 984920.0 25 0 174690.0 + 35051 LVDPLNMHV 9 91 519.7578584959058 1037.5011640586115 2 519.7595092654228 MULTI CID FTMS 0 0 0 18068 445539.71875 0.2595774937245234 2 -0.1915283203125 16 Unmodified _SQTDFSQLL_ ENSG00000138138|ENST00000680024|ATAD1;nc|ENSG00000138138|Q8NBU5-2|ATAD1 25.399314129420983 0.2080152500878129 3 [{I|L}V]D 3 8 21.963 0.0 0.0 2.1169 0.0 0.0 0.0 707.303235587759 707.303235587759 6.478174818886373 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]D 2.1169 - 121 1 1.03 43329.0 1.0 12338 5744 18068 HBL1_DMSO_200M_050219_1,18084 HBL1_DMSO_200M_050219_1,18084,SQTDFSQLL False True LVDPLNMHV 86.485911 519.759509265423 3994688.75 18068.0 ENSG00000138138|ENST00000680024|ATAD1;;nc|ENSG00000138138|Q8NBU5-2|ATAD1 5.23087477684021 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18085 86.495 505.0 809270.0 25 0 69332.0 + 16494 KALGLVIRL 9 211 491.8421835434849 981.6698141537696 2 491.8425170779228 MULTI CID FTMS 0 0 0 18068 432157.625 0.786172012228975 -1 0.1589736938476562 17 Unmodified _KALGLVIRL_ ENSG00000089154|ENST00000300648|GCN1 81.89019881105858 0.0170587746866453 3 KA{I|L}G{I|L}V{I|L}R{I|L} 9 0 + 80.733 0.0 0.0 8.2241 8.2241 85.982 0.0 0.0 0.0 20.096373105057552 5.268090389087689 5.268090389087689 2.887254899964347 0 1.8516784832448856 0.4814860601221125 0.0 0.5242275032520141 + + KA{I|L}G{I|L}V{I|L}R{I|L};KA{I|L}{I|L}GV{I|L}R{I|L};KA{I|L}G{I|L}V{I|L}{I|L}R;KA{I|L}{I|L}GV{I|L}{I|L}R;K{I|L}AG{I|L}V{I|L}R{I|L};K{I|L}A{I|L}GV{I|L}R{I|L};{I|L}KAG{I|L}V{I|L}R{I|L};K{I|L}AG{I|L}V{I|L}{I|L}R;{I|L}KA{I|L}GV{I|L}R{I|L};K{I|L}A{I|L}GV{I|L}{I|L}R 8.2241;7.9299;7.6874;7.3933;6.5602;6.2661;6.1769;6.0236;5.8828;5.7294 +;-;-;-;-;-;-;-;-;- + 2411 + 1 1.03 305632.6 1.0 12339 5744 18068 HBL1_DMSO_200M_050219_1,18085 HBL1_DMSO_200M_050219_1,18085,KALGLVIRL True True KALGLVIRL 86.494814 491.842517077923 4530795.5 18068.0 ENSG00000089154|ENST00000300648|GCN1 4.295183897018433 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18086 86.499 196.0 566810.0 25 0 67296.0 -1 0 104 608.3141763400699 607.3068998734699 1 608.3150512576103 MULTI CID FTMS 0 0 0 18068 389568.09375 0.1020458900310471 4 -0.3168792724609375 18 3 [MT]{I|L}M{I|L} 5 -1 + 59.654 0.0 0.0 9.8226 9.8226 91.962 0.0 0.0 0.0 6.453650195120844 14.286662482156345 6.453650195120844 6.453650195120844 0 1.0994850021680094 1.2218487496163564 1.325257498915995 0.0 [MT]{I|L}M{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TM{I|L};[MT]{I|L}{I|L}M;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}M;[{I|L}T]MM{I|L};[{I|L}T]M{I|L}M;[{I|L}P]CY{I|L};[VP]MVY;[YV][VP]M;[VP][YV]M 9.8226;8.76;7.4702;6.4075;6.3628;4.0104;3.1733;1.9794;1.6357;0.61832 -;-;-;-;-;-;-;-;-;- 145 1 1.03 84162.1 1.0 12340 5744 18068 HBL1_DMSO_200M_050219_1,18086 HBL1_DMSO_200M_050219_1,18086, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18087 86.502 155.0 479980.0 25 0 74113.0 21419 LPGRLRALYLP 11 84 423.5975773687712 1267.7709027065137 3 423.5977661013603 MULTI CID FTMS 0 0 0 18068 384428.625 0.9688273280193348 -2 0.2044677734375 19 Unmodified _LPGRLRALYLP_ ENST00000333145.9_1_2:113993130-114016997:+|nuORF;ENST00000436293.6_1_2:113994150-114008465:+|nuORF 2.6312355333042263 0.8627335947654684 3 [{I|L}P][DP]V{I|L}PA 8 8 30.463 0.0 0.0 2.4029 0.0 0.0 0.0 462.2945234925231 462.2945234925231 19.493559221610965 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3807196863200844 0.0 [{I|L}P][DP]V{I|L}PA 2.4029 - 63 1 1.03 63101.8 1.0 12341 5744 18068 HBL1_DMSO_200M_050219_1,18087 HBL1_DMSO_200M_050219_1,18087,LPGRLRALYLP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18088 86.506 219.0 321000.0 25 0 21921.0 + 10693 FVVEHDFIMA 10 106 604.2942771913656 1206.5740014495311 2 604.2951537966728 MULTI CID FTMS 0 0 0 18068 363404.96875 0.1050915019543527 4 -0.3168792724609375 20 Unmodified _FVVEHDFIMA_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000510321.1_1_4:146044588-146044753:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 19.256988751693697 0.5244284437930726 3 V{M(Oxidation (M))|F}D{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}{[DS]|[MA]|[CV]|TT} 9 5 44.218 0.0 0.0 3.6648 0.0 0.0 119.074022361525 0.0 119.074022361525 0.0 17.007499097191285 0.0 0.0 0 0.5 0.0 0.0 0.0 V{M(Oxidation (M))|F}D{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}{[DS]|[MA]|[CV]|TT} 3.6648 - 2543 1 1.03 55310.5 1.0 12342 5744 18068 HBL1_DMSO_200M_050219_1,18088 HBL1_DMSO_200M_050219_1,18088,FVVEHDFIMA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18090 86.51 2.3 28346000.0 25 0 2170900.0 + 22256 LPRLTPPVL 9 76 503.326445046479 1004.638337159758 2 503.3271362185478 MULTI CID FTMS 0 0 0 18089 24185212.0 0.8390437184953727 -2 0.217132568359375 1 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 58.6788170122104 0.0268135626297836 3 [{I|L}P]RT{I|L}PPV{I|L} 9 2 + 81.085 0.0 0.0 8.071 8.071 95.328 0.0 0.0 0.0 15.686362358410122 47.71993202330784 15.686362358410122 14.195925227640984 0 1.305462187404089 1.154901959985743 1.5669015600442575 0.0 [{I|L}P]RT{I|L}PPV{I|L};[{I|L}P][{I|L}T]RPPV{I|L};[{I|L}P]RT{[HG]|PP}{I|L}V{I|L};[VP]PR{I|L}P[{I|L}T]{I|L};[{I|L}P]R[VP]P[{I|L}T]{I|L};{[HG]|PP}VR{I|L}P[{I|L}T]{I|L} 8.071;6.658;4.2704;2.5012;2.0263;1.5514 -;-;-;-;-;- 344 1 1.03 55252.3 1.0 12343 5745 18089 HBL1_DMSO_200M_050219_1,18090 HBL1_DMSO_200M_050219_1,18090,LPRLTPPVL True True LPRLTPPVL 86.510113 503.327136218548 1244708640.0 18089.0 nc|ENSG00000156261|P50990-2|CCT8;;nc|ENSG00000156261|P50990-3|CCT8;;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;;ENSG00000156261|ENST00000286788|CCT8 6.078966935475667 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18091 86.511 6.0 8123900.0 25 0 1062000.0 + 21051 LPAELINQI 9 71 505.79747336813 1009.58039380306 2 505.7978698611259 MULTI CID FTMS 0 0 0 18089 8175972.0 0.3313763847960946 3 -0.2587203979492187 2 Unmodified _LPAELINQI_ ENSG00000160877|ENST00000292431|NACC1 42.09456458481378 0.0639583784996157 3 [PA]E{I|L}{I|L}{I|L}N[Q{I|L}] 9 2 + 50.265 0.0 0.0 4.9788 4.9788 79.708 0.0 0.0 0.0 6.642078980768069 7.147642715192504 6.642078980768069 4.771212547196626 0 0.0 0.8860566476931632 0.7302046884880937 0.0 [PA]E{I|L}{I|L}{I|L}N[Q{I|L}];[PA]E{I|L}{I|L}N{I|L}[Q{I|L}];[{I|L}P]AE{I|L}{I|L}N[Q{I|L}];[PA]E{I|L}{I|L}{I|L}GG[Q{I|L}];[PA]{I|L}E{I|L}{I|L}N[Q{I|L}];[VP]DV{I|L}{I|L}N[Q{I|L}];[{I|L}P]AE{I|L}N{I|L}[Q{I|L}];[PA]E{I|L}{I|L}GG{I|L}[Q{I|L}];[PA]{I|L}E{I|L}N{I|L}[Q{I|L}];[VP]DV{I|L}N{I|L}[Q{I|L}] 4.9788;4.5062;4.3209;4.0668;3.9883;3.9508;3.8483;3.5942;3.5157;3.4782 -;-;+;-;-;-;-;-;-;- + 199 1 1.03 40578.6 1.0 12344 5745 18089 HBL1_DMSO_200M_050219_1,18091 HBL1_DMSO_200M_050219_1,18091,LPAELINQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18092 86.512 19.0 2684000.0 25 0 341930.0 + 25711 NIIELVHQV 9 99 532.8088799324801 1063.60320693176 2 532.8085815310478 MULTI CID FTMS 0 0 0 18089 1877949.0 0.2081392873130561 3 -0.2587203979492187 3 Unmodified _NIIELVHQV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 27.628801355627647 0.1796483985696185 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VW 7 3 55.811 0.0 0.0 5.2474 0.0 0.0 0.0 193.09896265201408 193.09896265201408 33.671437198779074 0.0 0.0 0.0 0 1.1382104921644451 2.0 0.3494850021680094 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VW 5.2474 - 337 + 1 1.03 43974.3 1.0 12345 5745 18089 HBL1_DMSO_200M_050219_1,18092 HBL1_DMSO_200M_050219_1,18092,NIIELVHQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18093 86.514 86.0 1121700.0 25 0 206980.0 -1 0 93 1010.8115071988376 3029.412692196712 3 1011.481311023235 MULTI CID FTMS 0 0 0 18089 1462319.125 1.0 0 0.0 4 3 [NP]{I|L}{[TV]|[{I|L}S]}{I|L}NQN 9 -1 34.147 0.0 0.0 1.1272 0.0 0.0 0.0 2032.831917620793 2032.831917620793 2.2037746486128 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.8494850021680094 [NP]{I|L}{[TV]|[{I|L}S]}{I|L}NQN 1.1272 - 1020 1 1.03 71459.1 1.0 12346 5745 18089 HBL1_DMSO_200M_050219_1,18093 HBL1_DMSO_200M_050219_1,18093, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18094 86.516 26.0 1634800.0 25 0 199420.0 + 42559 VTPPGFQLV 9 69 479.27393325796805 956.533313582736 2 479.2742187380791 MULTI CID FTMS 0 0 0 18089 1428103.875 0.4100391633569945 -2 0.217132568359375 5 Unmodified _VTPPGFQLV_ ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6 20.453626601364224 0.2830276176381075 3 {[TV]|[{I|L}S]}YY{I|L}S 6 6 37.408 0.0 0.0 3.9108 0.0 0.0 0.0 227.14150385056732 227.14150385056732 21.2101498947667 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[TV]|[{I|L}S]}YY{I|L}S 3.9108 - 75 1 1.03 41757.8 1.0 12347 5745 18089 HBL1_DMSO_200M_050219_1,18094 HBL1_DMSO_200M_050219_1,18094,VTPPGFQLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18095 86.518 111.0 727160.0 25 0 78241.0 + 39540 VAWLVAHV 8 99 447.763616461708 893.5126799902159 2 447.7640258669853 MULTI CID FTMS 0 0 0 18089 529448.6875 0.3278920251268905 -2 0.217132568359375 6 Unmodified _VAWLVAHV_ ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24 52.33426049586781 0.1282678332820461 3 {[VA]|[{I|L}G]}W{I|L}VAHV 8 0 + 62.273 0.0 0.0 6.9695 6.9695 94.668 0.0 0.0 0.0 24.026936619674508 10.529324278304912 10.529324278304912 41.85000872122252 0 1.066901560044258 1.6989700043360187 0.0 0.0 + + {[VA]|[{I|L}G]}W{I|L}VAHV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}H[R{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VH[R{I|L}] 6.9695;2.2857;1.6512 +;-;- + 157 + 1 1.03 66791.5 1.0 12348 5745 18089 HBL1_DMSO_200M_050219_1,18095 HBL1_DMSO_200M_050219_1,18095,VAWLVAHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18096 86.522 191.0 275490.0 25 0 18403.0 + 30156 QVPGEGDFAVL 11 102 566.2880031860979 1130.5614534389956 2 566.2880737185478 MULTI CID FTMS 0 0 0 18089 370967.40625 0.8581734394249965 -2 0.217132568359375 7 Unmodified _QVPGEGDFAVL_ ENSG00000116213|ENST00000270708|WRAP73 24.99096001346401 0.505407273373304 3 [EP]GGD{M(Oxidation (M))|F}AVGAV{I|L} 12 6 + 59.949 0.0 0.0 5.3026 5.3026 79.41 0.0 0.0 0.0 3.22979103330524 45.34527896307068 3.22979103330524 3.6015144778263704 0 0.6989700043360187 0.0 0.9417509724019616 0.0 [EP]GGD{M(Oxidation (M))|F}AVGAV{I|L};[EP]GGD{M(Oxidation (M))|F}ARAV{I|L};[EP]GGD{M(Oxidation (M))|F}AVQV{I|L};[EP]GGD{M(Oxidation (M))|F}AQVV{I|L};[EP]ND{M(Oxidation (M))|F}AVGAV{I|L};[EP]ND{M(Oxidation (M))|F}ARAV{I|L};[EP]ND{M(Oxidation (M))|F}AVQV{I|L};[EP]ND{M(Oxidation (M))|F}AQVV{I|L};[EP]GGD{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}AV{I|L};[EP]GGD{M(Oxidation (M))|F}A[AG]VV{I|L} 5.3026;4.9841;4.7178;4.7178;4.7178;4.4024;4.1362;4.1362;3.9286;3.9104 -;-;-;-;-;-;-;-;-;- 458 1 1.03 48078.7 1.0 12349 5745 18089 HBL1_DMSO_200M_050219_1,18096 HBL1_DMSO_200M_050219_1,18096,QVPGEGDFAVL False True QVPGEGDFAVL 86.521615 566.288073718548 5258906.0 18089.0 ENSG00000116213|ENST00000270708|WRAP73 0.6702330907185873 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18097 86.524 89.0 505140.0 25 0 62385.0 + 33285 SFQESVMDL 9 88 528.2399584775533 1054.4653640219065 2 528.2399169802666 MULTI CID FTMS 0 0 0 18089 359359.625 1.0 0 0.0 8 Unmodified _SFQESVMDL_ ENST00000420015.6_1_16:14722075-14723468:-|nuORF 24.020572477871973 0.2255576514309169 3 {I|L}KD{I|L} 4 7 24.826 0.0 0.0 2.3543 0.0 0.0 567.1647791603815 0.0 567.1647791603815 0.0 6.567492517065112 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {I|L}KD{I|L} 2.3543 - 250 + 1 1.03 42577.2 1.0 12350 5745 18089 HBL1_DMSO_200M_050219_1,18097 HBL1_DMSO_200M_050219_1,18097,SFQESVMDL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18098 86.532 482.0 255770.0 25 0 48883.0 -1 ICLLLLPRALS 11 138 634.8936519159671 1267.772750898734 2 634.8936035037041 MULTI CID FTMS 0 0 0 18089 319762.59375 0.8189555942180426 -1 0.0581588745117187 9 Carbamidomethyl (C) _IC(Carbamidomethyl (C))LLLLPRALS_ ENST00000409117.7_1_2:179316324-179318191:+|nuORF 3.2813086475875832 0.8596665074481906 3 V 1 -1 10.969 0.0 0.0 0.86523 0.0 0.0 1150.6934032198262 0.0 1150.6934032198262 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.86523 - 397 + 1 1.03 100662.9 1.0 12351 5745 18089 HBL1_DMSO_200M_050219_1,18098 HBL1_DMSO_200M_050219_1,18098,ICLLLLPRALS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18099 86.542 547.0 218740.0 25 0 31609.0 -1 0 100 1025.4899675002 3073.4480731008 3 1025.490893542767 MULTI CID FTMS 0 0 0 18089 230251.4375 0.7911246419399527 2 -0.1818313598632812 10 3 [EP]S{M(Oxidation (M))|F}TAQ{M(Oxidation (M))|F}V 9 -1 40.389 0.0 0.0 1.3141 0.0 0.0 0.0 2063.940479677225 2063.940479677225 25.612971861862302 0.0 0.0 0.0 0 0.0 0.0 1.4361818737241734 0.3252574989159953 [EP]S{M(Oxidation (M))|F}TAQ{M(Oxidation (M))|F}V 1.3141 - 4359 1 1.03 83853.0 1.0 12352 5745 18089 HBL1_DMSO_200M_050219_1,18099 HBL1_DMSO_200M_050219_1,18099, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18100 86.548 316.0 320100.0 25 0 54375.0 + 24434 MGVIVHII 8 107 441.2669222027252 880.5192914722504 2 441.2671386599541 MULTI CID FTMS 0 0 0 18089 230626.53125 0.5614548583400979 3 -0.2587203979492187 11 Unmodified _MGVIVHII_ ENSG00000277791|ENST00000619426|PSMB3 32.45364647766026 0.3613649037604678 3 [H{I|L}]VVG{I|L}M{I|L} 8 5 + 41.604 0.0 0.0 4.7249 4.7249 80.983 0.0 0.0 0.0 6.91377081630435 6.91377081630435 6.91377081630435 6.91377081630435 0 0.242992819099939 1.2218487496163564 0.0 0.0 [H{I|L}]VVG{I|L}M{I|L};{[WT]|[RM]}{I|L}VH{I|L}{I|L};[{I|L}V]HVG{I|L}M{I|L};[H{I|L}]V{I|L}[VG]M{I|L};[HV]{I|L}VG{I|L}M{I|L};[{I|L}V]GVH{I|L}M{I|L};[{I|L}V]H{I|L}[VG]M{I|L};[HV]{I|L}{I|L}[VG]M{I|L} 4.7249;3.9397;3.1574;3.1032;2.7954;2.4736;1.5357;1.1737 -;-;-;-;-;-;-;- 243 1 1.03 85169.5 1.0 12353 5745 18089 HBL1_DMSO_200M_050219_1,18100 HBL1_DMSO_200M_050219_1,18100,MGVIVHII False True MGVIVHII 86.54753 441.267138659954 8309019.5 18089.0 ENSG00000277791|ENST00000619426|PSMB3 2.2236731201410294 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18101 86.558 580.0 258240.0 25 0 10308.0 -1 0 127 1066.5046868705456 2130.994820807892 2 1066.505053699017 MULTI CID FTMS 0 0 0 18089 203769.015625 0.7068322949721814 1 -0.1333694458007812 12 3 {[TV]|[{I|L}S]}AADTA{I|L}YC(Carbamidomethyl (C)) 10 -1 48.647 0.0 0.0 2.2828 0.0 0.0 0.0 1062.490523282754 1062.490523282754 5.141777756782133 0.0 0.0 0.0 0 0.8807196863200843 1.154901959985743 2.4916440611282624 0.0 {[TV]|[{I|L}S]}AADTA{I|L}YC(Carbamidomethyl (C)) 2.2828 - 15536 1 1.03 97547.8 1.0 12354 5745 18089 HBL1_DMSO_200M_050219_1,18101 HBL1_DMSO_200M_050219_1,18101, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18102 86.563 307.0 326040.0 25 0 41299.0 + 14030 IAGSVLPSSL 10 135 472.2768233005065 942.5390936678132 2 472.2765380740166 MULTI CID FTMS 0 0 0 18089 181854.015625 0.0156279473627808 14 -1.3405303955078125 13 Unmodified _IAGSVLPSSL_ REV__ENST00000495160.2_3_3:57234031-57260394:-|nuORF 16.942295170755138 0.5632667538960775 3 TV 2 -1 15.771 0.0 0.0 1.6732 0.0 0.0 724.4120470142959 0.0 724.4120470142959 0.0 3.0064848758090434 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 TV 1.6732 - 151 + 1 1.03 79352.0 1.0 12355 5745 18089 HBL1_DMSO_200M_050219_1,18102 HBL1_DMSO_200M_050219_1,18102,IAGSVLPSSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18103 86.574 638.0 337720.0 25 0 16147.0 + 10503 FVADEELVHL 10 211 586.3030855262006 1170.591618119201 2 586.3027221560478 MULTI CID FTMS 0 0 0 18089 179478.625 0.1906240814502538 6 -0.5494384765625 14 Unmodified _FVADEELVHL_ ENSG00000149823|ENST00000279281|VPS51;ENST00000530673.1_2_11:64878667-64879056:+|nuORF;ENST00000533827.5_1_11:64876997-64879056:+|nuORF;nc|ENSG00000149823|Q9UID3-2|VPS51 21.74664581756881 0.480091245866545 3 VYA{I|L}NTH{I|L} 8 7 55.401 0.0 0.0 4.7328 0.0 0.0 241.1168999568948 0.0 241.1168999568948 0.0 26.65741663087512 0.0 0.0 0 1.274227503252014 0.0 1.885151878060192 0.0 VYA{I|L}NTH{I|L} 4.7328 - 7256 + 1 1.03 162892.6 1.0 12356 5745 18089 HBL1_DMSO_200M_050219_1,18103 HBL1_DMSO_200M_050219_1,18103,FVADEELVHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18104 86.586 614.0 130340.0 25 0 5344.7 -1 0 100 796.7056505359423 2387.0951222080266 3 797.0411254763603 MULTI CID FTMS 0 0 0 18089 167111.765625 0.7849594237929798 -1 0.0581588745117187 15 3 [YK]YPPPP 7 -1 32.47 0.0 0.0 1.3603 0.0 0.0 0.0 1541.6418535685204 1541.6418535685204 2.829241303624741 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.6307196863200843 [YK]YPPPP 1.3603 - 2510 1 1.03 65601.6 1.0 12357 5745 18089 HBL1_DMSO_200M_050219_1,18104 HBL1_DMSO_200M_050219_1,18104, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18105 86.592 324.0 378800.0 25 0 40093.0 + -1 VSIVCDTVPK 10 166 559.3008314057488 1116.5871098782975 2 559.3002807497978 MULTI CID FTMS 0 0 0 18089 167311.859375 1.0 0 0.0 16 Carbamidomethyl (C) _VSIVC(Carbamidomethyl (C))DTVPK_ REV__ENSG00000120694|ENST00000320027|HSPH1;REV__nc|ENSG00000120694|Q92598-2|HSPH1;REV__nc|ENSG00000120694|Q92598-4|HSPH1 10.073929032068715 0.6785112666868882 3 {[TV]|[{I|L}S]}{I|L}[MD]{[QV]|[N{I|L}]|[RA]|[KV]}S[KP] 10 -1 + 24.882 0.0 0.0 2.2284 2.2284 74.323 0.0 0.0 0.0 10.277481849775356 2.2480965660138708 2.2480965660138708 6.020599913279618 0 0.0 1.5228787452803376 0.5269763493273799 0.0 {[TV]|[{I|L}S]}{I|L}[MD]{[QV]|[N{I|L}]|[RA]|[KV]}S[KP];{[TV]|[{I|L}S]}{I|L}[MN]{NN|[MP]|[D{I|L}]|[EV]}S[KP];{[TV]|[{I|L}S]}{I|L}[MD][WK][KP];{[TV]|[{I|L}S]}W[TA]{NN|[MP]|[D{I|L}]|[EV]}S[KP];{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V][WQ][KP];[{I|L}T]V[MD]{[QV]|[N{I|L}]|[RA]|[KV]}S[KP];{[QD]|[EN]|[WG]|[KD]|[RS]}S{[QV]|[N{I|L}]|[RA]|[KV]}[MD]VPV;[{I|L}P][WY]{[QV]|[N{I|L}]|[RA]|[KV]}S[KP];[{I|L}T]V[MN]{NN|[MP]|[D{I|L}]|[EV]}S[KP];[VP]MK[RD]{M(Oxidation (M))|F}[KP] 2.2284;1.6892;1.6434;1.5315;1.4447;1.0756;0.61138;0.55868;0.53645;0.53172 -;-;-;-;-;-;-;-;-;- 557 1 1.03 96192.3 1.0 12358 5745 18089 HBL1_DMSO_200M_050219_1,18105 HBL1_DMSO_200M_050219_1,18105,VSIVCDTVPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18106 86.605 716.0 182260.0 25 0 14007.0 + 17941 KQYEEFYVGL 10 173 638.3167709953767 1274.618989057553 2 638.3200561404228 MULTI CID FTMS 0 0 0 18089 167473.40625 0.0775183730359858 5 -0.4801254272460937 17 Unmodified _KQYEEFYVGL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 45.739877483867886 0.1051543674217965 3 [QP]GE{I|L}NGEYVG{I|L} 12 6 + 76.588 0.0 0.0 6.0087 6.0087 78.493 0.0 0.0 0.0 1.704991310895707 14.189324688249194 1.704991310895707 1.704991310895707 0 1.1861818737241734 0.0 1.3494850021680094 0.3252574989159953 [QP]GE{I|L}NGEYVG{I|L};[Y{M(Oxidation (M))|F}]T{I|L}NGEYVG{I|L};{[QN]|[E{I|L}]|[KN]}[PA]NNGEYVG{I|L};{NN|[MP]|[D{I|L}]|[EV]}P[QA]NGEYVG{I|L};[YQ]KEE{M(Oxidation (M))|F}YVG{I|L};[VP][DV]NNGEYVG{I|L};[DP][QA]{I|L}NGEYVG{I|L};{[DA]|[EG]}[QP]{I|L}NGEYVG{I|L};[YQ]KE{M(Oxidation (M))|F}EYVG{I|L};[VP]E[QA]NGEYVG{I|L} 6.0087;5.875;5.8706;5.5487;5.4068;5.3855;5.3417;5.3299;5.3268;5.2998 -;-;-;-;-;-;-;-;-;- 5081 1 1.03 108151.0 1.0 12359 5745 18089 HBL1_DMSO_200M_050219_1,18106 HBL1_DMSO_200M_050219_1,18106,KQYEEFYVGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18107 86.619 800.0 346080.0 25 0 15534.0 + 30917 RIVELFRNL 9 215 387.2364205050766 1158.6874321154298 3 387.2368041872978 MULTI CID FTMS 0 0 0 18089 149481.953125 1.0 0 0.0 18 Unmodified _RIVELFRNL_ ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3 29.28111348798908 0.1586252267974456 3 [R{I|L}]VE{I|L}{M(Oxidation (M))|F}RN{I|L} 9 0 + 44.955 0.0 0.0 3.8798 3.8798 77.927 0.0 0.0 0.0 6.453743353361141 16.478174818886373 6.453743353361141 6.453743353361141 0 1.5001738569154126 0.8860566476931632 0.0 0.0 + + [R{I|L}]VE{I|L}{M(Oxidation (M))|F}RN{I|L};[{I|L}P][RP]T{I|L}[HV]N{I|L};[{I|L}P][RP]{I|L}T[HV]N{I|L};[R{I|L}][TP]{I|L}P[HV]N{I|L};[R{I|L}]VE{I|L}{M(Oxidation (M))|F}RGG{I|L};[R{I|L}][TP]P{I|L}[HV]N{I|L};[R{I|L}]VE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]{I|L};[TP][R{I|L}]{I|L}P[HV]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}{M(Oxidation (M))|F}RN{I|L};[TP][R{I|L}]P{I|L}[HV]N{I|L} 3.8798;3.3228;3.1708;3.106;3.0851;2.8693;2.7199;2.3892;2.3609;2.1525 +;-;-;-;-;-;-;-;-;- + 893 1 1.03 225813.3 0.75 12360 5745 18089 HBL1_DMSO_200M_050219_1,18107 HBL1_DMSO_200M_050219_1,18107,RIVELFRNL False True RIVELFRNL 86.618528 387.236804187298 1580150.25 18089.0 ENSG00000168610|ENST00000264657|STAT3;;nc|ENSG00000168610|P40763-2|STAT3;;nc|ENSG00000168610|P40763-3|STAT3 3.0095744132995605 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18108 86.634 800.0 373280.0 25 0 36368.0 + 31987 RVFPLRVAELL 11 223 438.2743433902932 1311.8012007710795 3 438.2751037478447 MULTI CID FTMS 0 0 0 18089 128302.3515625 0.1835857285281162 -8 0.7847976684570312 19 Unmodified _RVFPLRVAELL_ REV__ENSG00000162413|ENST00000377658|KLHL21;REV__nc|ENSG00000162413|Q9UJP4-2|KLHL21 15.248480904072842 0.7179608125786238 3 [VG]V{[QV]|[N{I|L}]|[RA]|[KV]}PV{I|L}{M(Oxidation (M))|F} 9 -1 39.459 0.0 0.0 3.008 0.0 0.0 0.0 370.2194896940251 370.2194896940251 12.569298837030168 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.805462187404089 [VG]V{[QV]|[N{I|L}]|[RA]|[KV]}PV{I|L}{M(Oxidation (M))|F} 3.008 - 1956 + 1 1.03 232665.2 0.7400000095367432 12361 5745 18089 HBL1_DMSO_200M_050219_1,18108 HBL1_DMSO_200M_050219_1,18108,RVFPLRVAELL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18109 86.639 308.0 407290.0 25 0 46727.0 -1 SIPRSMKVI 9 181 523.8033719294538 1045.5921909257074 2 523.8044311404228 MULTI CID FTMS 0 0 0 18089 122834.2734375 0.0453688648621446 -9 0.8975677490234375 20 Oxidation (M) _SIPRSM(Oxidation (M))KVI_ ENSG00000111877|ENST00000619706|MCM9;ENST00000436788.2_1_6:119243146-119245209:-|nuORF;nc|ENSG00000111877|Q9NXL9-2|MCM9;nc|ENSG00000111877|Q9NXL9-3|MCM9 19.256988751693697 0.3154191944385105 3 {I|L}C(Carbamidomethyl (C))Y 3 -1 27.211 0.0 0.0 2.6024 0.0 0.0 0.0 606.3748873346311 606.3748873346311 2.149188659133401 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 {I|L}C(Carbamidomethyl (C))Y 2.6024 - 590 + 1 1.03 105462.1 1.0 12362 5745 18089 HBL1_DMSO_200M_050219_1,18109 HBL1_DMSO_200M_050219_1,18109,SIPRSMKVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18111 86.643 9.5 3033200.0 25 0 358550.0 18690 LAIWEASL 8 62 451.75254133747273 901.4905297417456 2 451.7529479861259 MULTI CID FTMS 0 0 0 18110 5577977.5 0.2390725243014472 15 -1.4855728149414062 1 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 14.581692164780916 0.6954967302934248 3 [{I|L}A]{[WT]|[RM]}D 5 5 30.954 0.0 0.0 3.4337 0.0 0.0 0.0 312.192042763483 312.192042763483 14.756499699645858 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A]{[WT]|[RM]}D 3.4337 - 32 1 1.048 25846.8 1.0 12363 5746 18110 HBL1_DMSO_200M_050219_1,18111 HBL1_DMSO_200M_050219_1,18111,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18112 86.645 16.0 3650800.0 25 0 361860.0 + 20835 LLYWLVWAV 9 98 581.8343685029253 1161.6541840726504 2 581.8348266482353 MULTI CID FTMS 0 0 0 18110 1878760.5 0.5100436293565219 2 -0.1253509521484375 2 Unmodified _LLYWLVWAV_ REV__ENSG00000164363|ENST00000324642|SLC6A18 28.17323086031832 0.1727213568982648 3 P{M(Oxidation (M))|F}YAV 5 -1 43.443 0.0 0.0 3.7398 0.0 0.0 566.3529473983886 0.0 566.3529473983886 0.0 32.98577533287428 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 P{M(Oxidation (M))|F}YAV 3.7398 - 65 1 1.048 50336.4 1.0 12364 5746 18110 HBL1_DMSO_200M_050219_1,18112 HBL1_DMSO_200M_050219_1,18112,LLYWLVWAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18113 86.646 14.0 4738200.0 25 0 398020.0 + 29588 QLVDIIEKV 9 91 528.8186749961957 1055.6227970591913 2 528.8193237185478 MULTI CID FTMS 0 0 0 18110 3487534.25 0.2202976190024996 -3 0.3505020141601562 3 Unmodified _QLVDIIEKV_ ENSG00000131467|ENST00000590720|PSME3;ENST00000593111.1_1_17:40986588-40991030:+|nuORF;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3 49.52724829834842 0.0414064571532091 3 Q{I|L}VD{I|L}{I|L}EKV 9 0 + 87.423 0.0 0.0 8.2817 8.2817 89.319 0.0 0.0 0.0 13.46787486224656 5.0 5.0 5.0 0 1.260001290417896 1.5228787452803376 0.7742275032520141 0.1989700043360188 + + Q{I|L}VD{I|L}{I|L}EKV;Q{I|L}VD{I|L}{I|L}EVK;{NN|[MP]|[D{I|L}]|[EV]}K{[HG]|PP}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{[HG]|PP}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RH]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[TV]|[{I|L}S]}G[RH]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[SA]|[TG]}V[RH]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V 8.2817;7.808;2.3978;2.0668;1.7383;1.448;1.1195 +;-;-;-;-;-;- + 240 + 1 1.048 62059.7 1.0 12365 5746 18110 HBL1_DMSO_200M_050219_1,18113 HBL1_DMSO_200M_050219_1,18113,QLVDIIEKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18114 86.647 17.0 4001600.0 25 0 676900.0 + 11562 GIYTGFIKV 9 92 499.28969435876377 996.5648357843276 2 499.2901489138603 MULTI CID FTMS 0 0 0 18110 2650134.25 0.4384667495244118 -2 0.1915283203125 4 Unmodified _GIYTGFIKV_ ENSG00000153179|ENST00000542104|RASSF3 37.97399986684836 0.0865783450051559 3 {[VA]|[{I|L}G]}YT 4 5 47.747 0.0 0.0 4.7912 0.0 0.0 0.0 559.326943106668 559.326943106668 18.948565749036064 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.4247425010840047 0.0 + {[VA]|[{I|L}G]}YT 4.7912 + + 165 + 1 1.048 59560.2 1.0 12366 5746 18110 HBL1_DMSO_200M_050219_1,18114 HBL1_DMSO_200M_050219_1,18114,GIYTGFIKV True True GIYTGFIKV 86.647017 499.29014891386 160240416.0 18110.0 ENSG00000153179|ENST00000542104|RASSF3 6.332754770914714 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18115 86.648 24.0 2588800.0 25 0 236050.0 + 12919 GYPEVALHF 9 71 516.7598526758622 1031.5051524185244 2 516.7613403201103 MULTI CID FTMS 0 0 0 18110 2096169.75 0.9387680361485996 -1 0.1333694458007812 5 Unmodified _GYPEVALHF_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 29.081581746732265 0.1611639662936252 3 [YG]PEVA{I|L}H{M(Oxidation (M))|F} 9 0 + 66.124 0.0 0.0 6.4104 6.4104 91.145 0.0 0.0 0.0 12.021307353014947 10.747534640495182 10.747534640495182 14.279032320494808 0 0.3494850021680094 2.0 0.4247425010840047 0.0 + + [YG]PEVA{I|L}H{M(Oxidation (M))|F};[YG]PEVA{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};[YG]P[W{I|L}]{I|L}H{M(Oxidation (M))|F};[YG]PEV[PG][WK];[YG]PE[Y{I|L}][YK];[YG]PE[RP][WK];[YG]PEV[PG][NS]{I|L};[YG]PE[RP][NS]{I|L};[YG]P{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VR{M(Oxidation (M))|F};[YG]P[W{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L} 6.4104;5.0262;4.3072;4.1778;4.1335;4.0123;3.8416;3.6709;3.4589;2.9229 +;-;-;-;-;-;-;-;-;- + 147 + 1 1.048 56377.8 1.0 12367 5746 18110 HBL1_DMSO_200M_050219_1,18115 HBL1_DMSO_200M_050219_1,18115,GYPEVALHF False True GYPEVALHF 86.648194 516.76134032011 57827588.0 18110.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 7.876146634419759 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18116 86.65 50.0 964880.0 25 0 248010.0 + 31229 RLRRFMFLI 9 50 417.92220515469927 1250.7447860642978 3 417.9221374392509 MULTI CID FTMS 0 0 0 18110 1269800.625 0.8477456730851479 1 -0.0484619140625 6 Unmodified _RLRRFMFLI_ REV__ENSG00000130653|ENST00000406427|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29-2|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29-3|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29-4|PNPLA7;REV__nc|ENSG00000130653|Q6ZV29|PNPLA7 0.6014990680409731 0.8936861360942873 3 P 1 -1 0.48455 0.0 0.0 0.038741 0.0 0.0 1030.6134059146868 120.05079065494374 1150.6641965696306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.038741 - 1 + 1 1.048 44557.3 1.0 12368 5746 18110 HBL1_DMSO_200M_050219_1,18116 HBL1_DMSO_200M_050219_1,18116,RLRRFMFLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18117 86.651 51.0 1145600.0 25 0 254370.0 + 28754 PWAGPLSL 8 87 420.7342859599903 839.4540189867805 2 420.7342712283134 MULTI CID FTMS 0 0 0 18110 1245940.75 0.3143464474513137 4 -0.3467559814453125 7 Unmodified _PWAGPLSL_ ENST00000368347.8_1_1:155293744-155293912:+|nuORF 56.04830969593885 0.114297258605095 3 [WP]GAP{I|L}S{I|L} 8 2 + 70.839 0.0 0.0 8.4387 8.4387 90.783 0.0 0.0 0.0 22.21848749616356 52.422750325201406 22.21848749616356 6.409780573583319 0 0.9247425010840048 1.5228787452803376 0.4247425010840047 0.0 [WP]GAP{I|L}S{I|L};[WP]QP{I|L}S{I|L};[WP]G{I|L}[PA]S{I|L};[WP]{I|L}G[PA]S{I|L};[WP]{I|L}[QP]S{I|L};[{I|L}P]WG[PA]S{I|L};[QP]WP{I|L}S{I|L};[{I|L}P]W[QP]S{I|L};[WP][VP]AAS{I|L};[WP][VP][QT]{I|L} 8.4387;7.6751;7.2809;6.5636;5.8001;5.3724;4.8543;4.6088;4.33;3.3294 -;-;-;-;-;-;-;-;-;- 220 1 1.048 50720.0 1.0 12369 5746 18110 HBL1_DMSO_200M_050219_1,18117 HBL1_DMSO_200M_050219_1,18117,PWAGPLSL True True PWAGPLSL 86.650846 420.734271228313 49888176.0 18110.0 ENST00000368347.8_1_1:155293744-155293912:+|nuORF 1.595633625984192 2.0 True 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18118 86.652 68.0 1230000.0 25 0 146510.0 + 15427 IPPPVIMV 8 85 433.2642702046081 864.5139874760163 2 433.2643615603447 MULTI CID FTMS 0 0 0 18110 1128302.75 1.0 0 0.0 8 Unmodified _IPPPVIMV_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 32.45364647766026 0.3613649037604678 3 [{I|L}P]VPP{I|L}MV 8 2 + 43.294 0.0 0.0 5.0079 5.0079 75.014 0.0 0.0 0.0 1.663314217665253 9.419628234359578 1.663314217665253 1.663314217665253 0 0.7429928190999391 1.5228787452803376 0.0 0.0 [{I|L}P]VPP{I|L}MV;[VP]PP{I|L}{I|L}MV;[{I|L}P]PVP{I|L}MV;[{I|L}P]VP{I|L}PMV;[VP]P{I|L}P{I|L}MV;[VP]{I|L}PP{I|L}MV;[{I|L}P]VPPM{I|L}V;[{I|L}P]PV{I|L}PMV;[VP]PP{I|L}M{I|L}V;[{M(Oxidation (M))|F}T]{I|L}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.0079;4.8155;4.5475;4.3114;4.2636;4.2636;3.8776;3.8511;3.6852;3.5842 -;-;-;-;-;-;-;-;-;- 228 1 1.048 73873.2 1.0 12370 5746 18110 HBL1_DMSO_200M_050219_1,18118 HBL1_DMSO_200M_050219_1,18118,IPPPVIMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18119 86.654 50.0 1000700.0 25 0 66769.0 + 8266 EQIKFFEEV 9 77 584.7979789810836 1167.581405028967 2 584.7988159060478 MULTI CID FTMS 0 0 0 18110 1056069.875 0.5503994562037927 -2 0.1915283203125 9 Unmodified _EQIKFFEEV_ ENSG00000143155|ENST00000367833|TIPRL;nc|ENSG00000143155|O75663-2|TIPRL 24.020572477871973 0.2255576514309169 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[MG]|[TS]}S[Y{I|L}]EV 10 5 + 21.555 0.0 0.0 1.8461 1.8461 67.408 0.0 0.0 0.0 1.1558175359571088 1.2478503142274953 1.1558175359571088 1.2478503142274953 0 0.3807196863200844 0.0 0.8252574989159953 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[MG]|[TS]}S[Y{I|L}]EV;[NP]{I|L}[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}E[{M(Oxidation (M))|F}V];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[Y{I|L}]EV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[{M(Oxidation (M))|F}V]K[YN]Q;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}V]{I|L}K[YN]Q;[AG][VP][R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}E[{M(Oxidation (M))|F}V];[NP]{I|L}{[RE]|[WV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}V] 1.8461;1.7393;1.2659;1.1577;1.0068;0.63322;0.4119 -;-;-;-;-;-;- 261 + 1 1.048 45760.4 1.0 12371 5746 18110 HBL1_DMSO_200M_050219_1,18119 HBL1_DMSO_200M_050219_1,18119,EQIKFFEEV False True EQIKFFEEV 86.653794 584.798815906048 18757480.0 18110.0 ENSG00000143155|ENST00000367833|TIPRL;;nc|ENSG00000143155|O75663-2|TIPRL 5.740922292073567 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18120 86.655 52.0 1100400.0 25 0 89900.0 + 44333 YLPPGFLSA 9 82 482.7602208482151 963.50588876323 2 482.7608215212822 MULTI CID FTMS 0 0 0 18110 1004936.8125 0.739341773395155 4 -0.3467559814453125 10 Unmodified _YLPPGFLSA_ ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-4|SREBF1 44.40701690623563 0.0526327925666318 3 {I|L}Y{I|L}P[WP] 6 6 31.788 0.0 0.0 3.2992 0.0 0.0 176.07688593295512 0.0 176.07688593295512 0.0 0.9739363795235612 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.0 {I|L}Y{I|L}P[WP] 3.2992 - 212 + 1 1.048 47854.7 1.0 12372 5746 18110 HBL1_DMSO_200M_050219_1,18120 HBL1_DMSO_200M_050219_1,18120,YLPPGFLSA True True YLPPGFLSA 86.65515 482.760821521282 80260800.0 18110.0 ENST00000395756.5_1_17:17715938-17721122:-|nuORF;;ENSG00000072310|ENST00000261646|SREBF1;;nc|ENSG00000072310|P36956-4|SREBF1 7.126214186350505 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18121 86.656 49.0 1480200.0 25 0 258670.0 + 12560 GVIDACIKL 9 99 466.2678297942588 930.5211066553176 2 466.2679931521416 MULTI CID FTMS 0 0 0 18110 850108.4375 1.0 0 0.0 11 Unmodified _GVIDACIKL_ ENSG00000185009|ENST00000355264|AP3M1 43.85829265575387 0.0542763391141878 3 [VG]{I|L}DAC{I|L}K{I|L} 9 0 + 75.851 0.0 0.0 8.1515 8.1515 95.807 0.0 0.0 0.0 17.14210597324417 12.98332479720628 12.98332479720628 16.197887582883936 0 0.6989700043360187 2.0 0.4247425010840047 0.0 + + [VG]{I|L}DAC{I|L}K{I|L};[VG]{I|L}D{[WT]|[RM]}K{I|L};[VG]{I|L}D[WK]T{I|L};[VG]{I|L}DA{[ET]|[MV]}KV;[VG]{I|L}W{[ET]|[MV]}KV;[VG][DC][{I|L}A]{I|L}K{I|L} 8.1515;6.4108;5.7637;5.312;4.6158;3.3702 +;-;-;-;-;- + 250 + 1 1.048 59533.8 1.0 12373 5746 18110 HBL1_DMSO_200M_050219_1,18121 HBL1_DMSO_200M_050219_1,18121,GVIDACIKL True True GVIDACIKL 86.656454 466.267993152142 7907926.5 18110.0 ENSG00000185009|ENST00000355264|AP3M1 6.380366961161296 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18122 86.658 84.0 1484000.0 25 0 139440.0 + 2907 AVFPHLTVV 9 139 491.7899853969666 981.5654178607332 2 491.7901489138603 MULTI CID FTMS 0 0 0 18110 701743.9375 0.7250184339531106 -1 0.1333694458007812 12 Unmodified _AVFPHLTVV_ ENSG00000134825|ENST00000537328|TMEM258 63.562846038646086 0.0241094678104353 3 [H{I|L}]M{I|L}TVAVV 9 7 + 51.947 0.0 0.0 5.2922 5.2922 74.905 0.0 0.0 0.0 5.924325916815931 6.395067726032551 5.924325916815931 0.9509804001425692 0 0.5994850021680094 1.154901959985743 1.1549471895720984 0.0 [H{I|L}]M{I|L}TVAVV;[H{I|L}]TP{M(Oxidation (M))|F}VAVV;[H{I|L}]PT{M(Oxidation (M))|F}VAVV;[H{I|L}]P{M(Oxidation (M))|F}TVAVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}TVAVV;[H{I|L}]TPV{M(Oxidation (M))|F}AVV;[H{I|L}]M{I|L}TVVAV;[H{I|L}]TP{M(Oxidation (M))|F}VVAV;[H{I|L}]PTV{M(Oxidation (M))|F}AVV;[H{I|L}]PT{M(Oxidation (M))|F}VVAV 5.2922;5.1953;4.9913;4.8061;4.6887;4.5053;4.4475;4.3506;4.3012;4.1465 -;-;-;-;-;-;-;-;-;- 986 1 1.048 98892.0 1.0 12374 5746 18110 HBL1_DMSO_200M_050219_1,18122 HBL1_DMSO_200M_050219_1,18122,AVFPHLTVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18123 86.665 375.0 733460.0 25 0 23056.0 -1 0 170 1002.9755283706954 2003.9365038081908 2 1002.976367175579 MULTI CID FTMS 0 0 0 18110 625318.75 0.984895079452331 -1 0.1333694458007812 13 3 NMPN{I|L}NEEQHAA[QA]QS 16 -1 114.04 0.0 0.0 5.6907 0.0 0.0 0.0 238.11985193424064 238.11985193424064 7.259547341144241 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 1.958170666312956 1.3001648626366045 NMPN{I|L}NEEQHAA[QA]QS 5.6907 - 185013 + 1 1.048 176655.2 1.0 12375 5746 18110 HBL1_DMSO_200M_050219_1,18123 HBL1_DMSO_200M_050219_1,18123, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18124 86.666 46.0 991800.0 25 0 140360.0 + 5229 DIYSKFDVI 9 81 550.2893075595085 0 550.2894775271416 PEAK CID FTMS 0 0 0 18110 519372.125 0.801949665268603 -1 0.1333694458007812 14 Unmodified _DIYSKFDVI_ ENSG00000106617|ENST00000287878|PRKAG2;ENSG00000181929|ENST00000548065|PRKAG1;ENST00000546531.5_1_12:49396684-49399341:-|nuORF;nc|ENSG00000106617|Q9UGJ0-2|PRKAG2;nc|ENSG00000106617|Q9UGJ0-3|PRKAG2;nc|ENSG00000181929|P54619-2|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1 16.149105407346934 0.2417352846137613 3 EY 2 8 14.464 0.0 0.0 1.3166 0.0 0.0 230.17094802741696 573.2664278619749 803.4373758893919 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 EY 1.3166 - 40 + 1 1.048 44730.9 1.0 12376 5746 18110 HBL1_DMSO_200M_050219_1,18124 HBL1_DMSO_200M_050219_1,18124,DIYSKFDVI False True DIYSKFDVI 86.666373 550.289477527142 6413611.0 18110.0 nc|ENSG00000106617|Q9UGJ0-3|PRKAG2;;ENST00000546531.5_1_12:49396684-49399341:-|nuORF;;ENSG00000181929|ENST00000548065|PRKAG1;;nc|ENSG00000181929|P54619-3|PRKAG1;;ENSG00000106617|ENST00000287878|PRKAG2;;nc|ENSG00000106617|Q9UGJ0-2|PRKAG2;;nc|ENSG00000181929|P54619-2|PRKAG1 3.245759884516398 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18125 86.668 72.0 643980.0 25 0 169260.0 20467 LLKWGRWVRLS 11 77 471.952420540289 1412.835432221067 3 472.2887451052666 MULTI CID FTMS 0 0 0 18110 536601.25 0.3599596169987615 -3 0.3505020141601562 15 Unmodified _LLKWGRWVRLS_ ENST00000439374.6_1_1:151025289-151025496:-|nuORF 6.2057823575117 0.8458686499021061 3 TV 2 10 13.928 0.0 0.0 0.98581 0.0 0.0 1194.7083855675498 0.0 1194.7083855675498 0.0 2.138728941490829 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TV 0.98581 - 21 + 1 1.048 51393.6 1.0 12377 5746 18110 HBL1_DMSO_200M_050219_1,18125 HBL1_DMSO_200M_050219_1,18125,LLKWGRWVRLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18126 86.671 122.0 1197600.0 25 0 195350.0 1899 ALYSDRSI 8 106 462.7439258842263 923.4732988352524 2 462.7444335818291 MULTI CID FTMS 0 0 0 18110 436232.46875 0.2476991620334178 24 -2.403472900390625 16 Unmodified _ALYSDRSI_ ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5 26.34127834903884 0.4900704351052977 3 [{I|L}A]P{I|L}{M(Oxidation (M))|F} 5 6 41.259 0.0 0.0 4.4678 0.0 0.0 0.0 379.16034876041255 379.16034876041255 28.16000528977051 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L}{M(Oxidation (M))|F} 4.4678 - 59 + 1 1.048 115990.2 1.0 12378 5746 18110 HBL1_DMSO_200M_050219_1,18126 HBL1_DMSO_200M_050219_1,18126,ALYSDRSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18127 86.673 91.0 635150.0 25 0 74528.0 + 18112 KTLEEFQDVYL 11 85 692.8525065281541 1383.690460123108 2 692.8531371951103 MULTI CID FTMS 0 0 0 18110 351784.9375 1.0 0 0.0 17 Unmodified _KTLEEFQDVYL_ ENSG00000050748|ENST00000452135|MAPK9;ENSG00000109339|ENST00000641462|MAPK10;ENST00000397072.7_1_5:179665329-179706839:-|nuORF;ENST00000523135.1_1_5:179680521-179691830:-|nuORF;nc|ENSG00000050748|P45984-2|MAPK9;nc|ENSG00000050748|P45984-3|MAPK9;nc|ENSG00000050748|P45984-4|MAPK9;nc|ENSG00000050748|P45984-5|MAPK9;nc|ENSG00000109339|P53779-2|MAPK10;nc|ENSG00000109339|P53779-3|MAPK10 14.95716135407024 0.7240205813188479 3 [YG]{I|L}VT[DV]QDVY{I|L} 12 6 + 59.452 0.0 0.0 4.2966 4.2966 53.382 0.0 0.0 0.0 15.801733156004031 9.269608018250594 9.269608018250594 0.0 0 0.5629529932484498 1.3979400086720375 0.0 0.0 [YG]{I|L}VT[DV]QDVY{I|L};[YG]{I|L}V[PA]{M(Oxidation (M))|F}QDVY{I|L};[YG]{I|L}P{[VA]|[{I|L}G]}{M(Oxidation (M))|F}QDVY{I|L};[YG]{I|L}E{I|L}[TA]QDVY{I|L};[YG]{I|L}VT[DV][AG]DVY{I|L};[YG]{I|L}V[PA]{M(Oxidation (M))|F}[AG]DVY{I|L};[YG]E{I|L}{I|L}[TA]QDVY{I|L};[YG]{I|L}P{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[AG]DVY{I|L};[YG]{I|L}E{I|L}[TA][AG]DVY{I|L};[{I|L}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{M(Oxidation (M))|F}QDVY{I|L} 4.2966;4.2966;3.9034;3.7762;3.6391;3.6391;3.271;3.2459;3.1186;2.731 -;-;-;-;-;-;-;-;-;- 817 1 1.048 48861.3 1.0 12379 5746 18110 HBL1_DMSO_200M_050219_1,18127 HBL1_DMSO_200M_050219_1,18127,KTLEEFQDVYL False True KTLEEFQDVYL 86.672573 692.85313719511 2099325.75 18110.0 nc|ENSG00000050748|P45984-5|MAPK9;;ENST00000523135.1_1_5:179680521-179691830:-|nuORF;;nc|ENSG00000050748|P45984-3|MAPK9;;ENSG00000050748|ENST00000452135|MAPK9;;nc|ENSG00000109339|P53779-3|MAPK10;;nc|ENSG00000050748|P45984-2|MAPK9;;nc|ENSG00000109339|P53779-2|MAPK10;;ENSG00000109339|ENST00000641462|MAPK10;;nc|ENSG00000050748|P45984-4|MAPK9;;ENST00000397072.7_1_5:179665329-179706839:-|nuORF 5.304325262705485 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18128 86.674 79.0 279640.0 25 0 22577.0 + -1 MVPTIEWTV 9 50 546.27717468393 1090.5397964346598 2 546.2779418826103 MULTI CID FTMS 0 0 0 18110 279812.15625 0.2175750139015879 4 -0.3467559814453125 18 Oxidation (M) _M(Oxidation (M))VPTIEWTV_ REV__ENST00000378993.5_1_X:29938112-29959773:+|nuORF 4.3292370932331545 0.7635526921153418 3 V 1 -1 12.474 0.0 0.0 1.1439 0.0 0.0 973.4602961678614 0.0 973.4602961678614 0.0 5.307262395435969 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1439 + + 12 + 1 1.048 23132.4 1.0 12380 5746 18110 HBL1_DMSO_200M_050219_1,18128 HBL1_DMSO_200M_050219_1,18128,MVPTIEWTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18129 86.685 584.0 318740.0 25 0 42211.0 + 9286 FIDEQNYIL 9 188 577.7895671743997 1153.5645814155994 2 577.7897827029228 MULTI CID FTMS 0 0 0 18110 276181.75 0.3426492338656461 -4 0.39599609375 19 Unmodified _FIDEQNYIL_ ENSG00000157212|ENST00000404141|PAXIP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;nc|ENSG00000157212|Q6ZW49-2|PAXIP1 40.23920728925047 0.0741434193262949 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EQNY{I|L}{I|L} 9 2 + 43.647 0.0 0.0 3.7837 3.7837 79.555 0.0 0.0 0.0 8.750612633917001 9.371196280815496 8.750612633917001 8.750612633917001 0 0.5994850021680094 1.3979400086720375 0.2396518287104437 0.6382104921644451 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EQNY{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DEQNY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E[AG]NY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EQGGY{I|L}{I|L};[DN]SV{I|L}TSP[QP]P;[DN]SV{I|L}TSP[PG]AP;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}G[WQ]Y{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}G{[CP]|[EA]}NY{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}{I|L}NY{I|L}{I|L};[VS][PG]PST{I|L}S[Y{M(Oxidation (M))|F}] 3.7837;3.0251;2.9855;2.9855;2.9159;2.8831;2.6115;2.5719;2.4286;2.4257 -;+;-;-;-;-;-;-;-;- + 4524 1 1.048 144075.6 1.0 12381 5746 18110 HBL1_DMSO_200M_050219_1,18129 HBL1_DMSO_200M_050219_1,18129,FIDEQNYIL True True FIDEQNYIL 86.684611 577.789782702923 13038346.0 18110.0 nc|ENSG00000157212|Q6ZW49-1|PAXIP1;;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;;ENSG00000157212|ENST00000404141|PAXIP1;;nc|ENSG00000157212|Q6ZW49-2|PAXIP1;;ENST00000457196.5_1_7:154735861-154782774:-|nuORF 2.938525279362997 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18130 86.688 154.0 447410.0 25 0 43294.0 + 34140 SLLVSGNANV 10 113 487.2700202963856 972.5254876595712 2 487.7695495486259 MULTI CID FTMS 0 0 0 18110 272386.9375 0.4376300129937682 1 -0.0484619140625 20 Unmodified _SLLVSGNANV_ REV__ENSG00000129354|ENST00000250244|AP1M2;REV__nc|ENSG00000129354|Q9Y6Q5-2|AP1M2 20.453626601364224 0.5043500229302764 3 [VS]WVAD 6 -1 40.635 0.0 0.0 4.1783 0.0 0.0 0.0 312.1892809547461 312.1892809547461 16.00125491550763 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VS]WVAD 4.1783 - 420 1 1.048 56768.5 1.0 12382 5746 18110 HBL1_DMSO_200M_050219_1,18130 HBL1_DMSO_200M_050219_1,18130,SLLVSGNANV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18132 86.693 173.0 264530.0 25 0 92240.0 + -1 RVERIKLQLCV 11 62 707.4241354494376 1412.833717965675 2 707.4252197146416 MULTI CID FTMS 0 0 0 18131 389378.78125 0.4368891675539942 -2 0.1818313598632812 1 Carbamidomethyl (C) _RVERIKLQLC(Carbamidomethyl (C))V_ REV__ENSG00000079432|ENST00000681038|CIC;REV__nc|ENSG00000079432|Q96RK0-2|CIC 1.1933415558491238 0.8695176722560516 3 {I|L} 1 -1 9.6041 0.0 0.0 0.67978 0.0 0.0 1281.7384095934078 0.0 1281.7384095934078 0.0 2.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.67978 + + 8 + 1 1.048 48313.7 1.0 12383 5747 18131 HBL1_DMSO_200M_050219_1,18132 HBL1_DMSO_200M_050219_1,18132,RVERIKLQLCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18133 86.697 217.0 376900.0 25 0 38431.0 + -1 RIFGESIMIGV 11 118 619.3324130852416 0 619.3331786990166 PEAK CID FTMS 0 0 0 18131 250490.75 1.0 0 0.0 2 Oxidation (M) _RIFGESIM(Oxidation (M))IGV_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35;nc|ENSG00000163002|Q8NFH5-3|NUP35 24.881564428377168 0.2917536905067428 3 {I|L}{M(Oxidation (M))|F}{I|L}SW 5 -1 38.245 0.0 0.0 3.0927 0.0 0.0 174.1049373991955 413.2279146783813 587.3328520775768 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.805462187404089 0.0 {I|L}{M(Oxidation (M))|F}{I|L}SW 3.0927 - 296 + 1 1.048 62426.1 1.0 12384 5747 18131 HBL1_DMSO_200M_050219_1,18133 HBL1_DMSO_200M_050219_1,18133,RIFGESIMIGV False False RIFGESIMIGV 86.697187 619.333178699017 2184302.25 18131.0 ENSG00000163002|ENST00000295119|NUP35;;nc|ENSG00000163002|Q8NFH5-2|NUP35;;nc|ENSG00000163002|Q8NFH5-3|NUP35 7.780713240305583 2.0 True 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18134 86.698 14.0 3142900.0 25 0 417280.0 -1 LIDIAADWMT 10 79 582.7853227646449 1163.5560925960897 2 582.7861816287041 MULTI CID FTMS 0 0 0 18131 2487482.75 0.2945889700387616 -2 0.1818313598632812 3 Oxidation (M) _LIDIAADWM(Oxidation (M))T_ ENSG00000109572|ENST00000513761|CLCN3;nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3 10.073929032068715 0.6785112666868882 3 {I|L}{I|L}DEQ{I|L} 6 -1 40.596 0.0 0.0 3.4889 0.0 0.0 0.0 449.15793520767096 449.15793520767096 26.616225017174383 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 {I|L}{I|L}DEQ{I|L} 3.4889 - 87 1 1.048 37545.5 1.0 12385 5747 18131 HBL1_DMSO_200M_050219_1,18134 HBL1_DMSO_200M_050219_1,18134,LIDIAADWMT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18135 86.7 19.0 2627200.0 25 0 393590.0 + 45750 YYISPRLTF 9 52 580.3107839781225 1158.6070150230448 2 580.3118774294853 MULTI CID FTMS 0 0 0 18131 1882411.125 0.4573259236962134 -2 0.1818313598632812 4 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 17.11289562659939 0.3734572693229295 3 YY{I|L}S 4 5 56.186 0.0 0.0 4.8494 0.0 0.0 0.0 629.3428911658527 629.3428911658527 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YY{I|L}S 4.8494 + + 16 + 1 1.048 40661.3 1.0 12386 5747 18131 HBL1_DMSO_200M_050219_1,18135 HBL1_DMSO_200M_050219_1,18135,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18136 86.701 76.0 744340.0 25 0 89688.0 + 15715 IQYIPTELDQV 11 77 659.8480286687201 1317.68150440424 2 659.8488036990166 MULTI CID FTMS 0 0 0 18131 673990.3125 0.1239406621873303 -3 0.239990234375 5 Unmodified _IQYIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 40.23920728925047 0.2087110615831976 3 [TP]E{I|L}DQV 7 4 37.493 0.0 0.0 2.8453 0.0 0.0 0.0 532.2737034611338 532.2737034611338 13.240052648247804 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.6861818737241735 0.0 + [TP]E{I|L}DQV 2.8453 + + 427 1 1.048 51458.5 1.0 12387 5747 18131 HBL1_DMSO_200M_050219_1,18136 HBL1_DMSO_200M_050219_1,18136,IQYIPTELDQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18137 86.703 65.0 705240.0 25 0 105960.0 + 17156 KLIGDPNLEFV 11 70 622.8482798417656 1243.682006750331 2 622.8485595583916 MULTI CID FTMS 0 0 0 18131 581585.0625 0.9503685816352814 -1 0.0484619140625 6 Unmodified _KLIGDPNLEFV_ ENSG00000132341|ENST00000543796|RAN;ENST00000444720.1_1_13:21321226-21321529:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 17.44264345198275 0.6723198055858692 3 [NP]{I|L}E[RK]{I|L}E{M(Oxidation (M))|F}V 10 6 + 33.645 0.0 0.0 2.7053 2.7053 74.162 0.0 0.0 0.0 5.0404627391503 9.259687322722812 5.0404627391503 5.0404627391503 0 0.6989700043360187 0.0 0.0 0.0 [NP]{I|L}E[RK]{I|L}E{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[RK][NP]{I|L}E{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[NP][RK]{I|L}E{M(Oxidation (M))|F}V;[NP]{I|L}[TP][KS]{I|L}E{M(Oxidation (M))|F}V;[NP]{I|L}KK{M(Oxidation (M))|F}[HD]{M(Oxidation (M))|F}V;[NP]{I|L}KK{M(Oxidation (M))|F}[TP]S{[NV]|[RG]};[NP]{I|L}VV{[QS]|[NT]}{I|L}E{M(Oxidation (M))|F}V;{[MG]|[TS]}[HK][RK]{I|L}E{M(Oxidation (M))|F}V;[NP]{I|L}[{I|L}A][QT]{I|L}E{M(Oxidation (M))|F}V;[NP]{I|L}E{[RE]|[WV]}[K{I|L}]{M(Oxidation (M))|F}V 2.7053;2.3;2.0385;1.7264;1.6817;1.6063;1.4843;1.4397;1.4064;1.1976 -;-;-;-;-;-;-;-;-;- 160 1 1.048 39818.5 1.0 12388 5747 18131 HBL1_DMSO_200M_050219_1,18137 HBL1_DMSO_200M_050219_1,18137,KLIGDPNLEFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18138 86.707 193.0 337100.0 25 0 33968.0 + 23626 TVLTQEAIITV 11 96 594.3478024269767 1186.6810519207534 2 594.3483764529228 MULTI CID FTMS 0 0 0 18131 328061.96875 0.8556358685614682 1 -0.0768890380859375 7 Unmodified _LTQEAILSLTV_ nc|ENSG00000141391|Q96N28-2|PRELID3A;ENSG00000141391|ENST00000440960|PRELID3A;ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 57.72198328787511 0.0783903820882629 3 {[TV]|[{I|L}S]}[DN]{I|L}{I|L}S{I|L} 8 6 49.391 0.0 0.0 4.1621 0.0 0.0 0.0 328.18401757920964 328.18401757920964 20.536049848239344 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 1.6237125054200234 0.0 {[TV]|[{I|L}S]}[DN]{I|L}{I|L}S{I|L} 4.1621 - 1194 1 1.048 55936.5 1.0 12389 5747 18131 HBL1_DMSO_200M_050219_1,18138 HBL1_DMSO_200M_050219_1,18138,LTQEAILSLTV True True TVLTQEAIITV 86.70661 594.348376452923 4622815.5 18131.0 nc|ENSG00000141391|Q96N28-2|PRELID3A;;ENSG00000141391|ENST00000440960|PRELID3A;;ENSG00000101166|ENST00000355937|PRELID3B;;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 6.325025717417399 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18139 86.709 106.0 536070.0 25 0 56882.0 + 14251 IECFFHYI 8 100 536.2531675741451 1070.49178221509 2 536.2531616091728 MULTI CID FTMS 0 0 0 18131 323318.15625 0.5354728236510679 -2 0.1818313598632812 8 Unmodified _IECFFHYI_ REV__ENSG00000180658|ENST00000315453|OR2A4;REV__ENSG00000243896|ENST00000641841|OR2A7 15.768221252438446 0.6779680726941459 3 {I|L}D{[VA]|[{I|L}G]}HY{I|L} 7 -1 28.231 0.0 0.0 2.6372 0.0 0.0 241.0603379785651 0.0 241.0603379785651 0.0 17.953870608532494 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}D{[VA]|[{I|L}G]}HY{I|L} 2.6372 - 141 + 1 1.048 50977.4 1.0 12390 5747 18131 HBL1_DMSO_200M_050219_1,18139 HBL1_DMSO_200M_050219_1,18139,IECFFHYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18140 86.711 91.0 492750.0 25 0 55317.0 + -1 VQLDPQTVGVIV 12 77 634.3661643435296 1266.717775753859 2 634.3664428591728 MULTI CID FTMS 0 0 0 18131 286995.5625 0.864701010691425 1 -0.0768890380859375 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MKVHMLVGVLV_ ENSG00000196235|ENST00000432763|SUPT5H;nc|ENSG00000196235|O00267-2|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 8.155526934196011 0.8366696279279818 3 [VG]T[HK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VGVV{I|L} 12 -1 + 31.031 0.0 0.0 2.4497 2.4497 72.534 0.0 0.0 0.0 4.02397020076323 8.244171855527966 4.02397020076323 4.02397020076323 0 0.5796896906561032 1.2218487496163564 0.9247425010840048 0.0 [VG]T[HK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VGVV{I|L};{[SA]|[TG]}V[HK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VGVV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VGVV{I|L};[VG]T[HK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VRV{I|L};[VG]T[HK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RVV{I|L};{[SA]|[TG]}V[HK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VRV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VRV{I|L};{[SA]|[TG]}V[HK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RVV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HK]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RVV{I|L} 2.4497;2.1321;2.0528;1.9278;1.7707;1.6101;1.5337;1.453;1.3766 -;-;-;-;-;-;-;-;- 158 1 1.048 42617.4 1.0 12391 5747 18131 HBL1_DMSO_200M_050219_1,18140 HBL1_DMSO_200M_050219_1,18140,MKVHMLVGVLV False False VQLDPQTVGVIV 86.710895 634.366442859173 3652919.25 18131.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 5.792654355367024 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18141 86.713 100.0 580850.0 25 0 89651.0 + 15647 IQKYLYQLL 9 72 591.3486766957286 1180.6828004582571 2 591.3500854372978 MULTI CID FTMS 0 0 0 18131 275186.53125 0.7966740595553501 -1 0.0484619140625 10 Unmodified _IQKYLYQLL_ REV__ENSG00000155304|ENST00000285667|HSPA13 12.531546534597751 0.4974689918368763 3 [Q{I|L}]A{M(Oxidation (M))|F} 4 -1 19.007 0.0 0.0 1.6098 0.0 0.0 0.0 718.4117182651509 718.4117182651509 -0.378807668912362 0.0 -0.378807668912362 0.0 0 0.0 0.9208187539523752 0.0 0.2887254899964357 [Q{I|L}]A{M(Oxidation (M))|F} 1.6098 - 82 1 1.048 49857.6 1.0 12392 5747 18131 HBL1_DMSO_200M_050219_1,18141 HBL1_DMSO_200M_050219_1,18141,IQKYLYQLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18142 86.723 554.0 128940.0 25 0 8891.3 + + -1 ALWDIETGQQTV 12 124 680.8403100443074 1359.6660671554148 2 680.8412353396416 MULTI CID FTMS 0 0 0 18131 280302.4375 1.0 0 0.0 11 Oxidation (M) _LAPM(Oxidation (M))DRFTHRT_ ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000172354|P62879-2|GNB2 13.042465956692816 0.7638483625850725 3 [AG]TGQA{I|L}ET 9 -1 45.16 0.0 0.0 3.3214 0.0 0.0 0.0 528.2358663099648 528.2358663099648 12.551179107092167 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.535666875892183 0.4247425010840047 [AG]TGQA{I|L}ET 3.3214 - 4244 1 1.048 56484.0 1.0 12393 5747 18131 HBL1_DMSO_200M_050219_1,18142 HBL1_DMSO_200M_050219_1,18142,LAPMDRFTHRT False False ALWDIETGQQTV 86.722787 680.841235339642 2497156.0 18131.0 ENSG00000172354|ENST00000303210|GNB2;;nc|ENSG00000172354|P62879-2|GNB2 6.802915891011556 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18143 86.728 264.0 406600.0 25 0 46651.0 + -1 LTQTDYIDM 9 138 558.2504992770091 1114.486445620818 2 558.7596923708916 MULTI CID FTMS 0 0 0 18131 278874.375 0.7847846414733582 4 -0.3676071166992187 12 Oxidation (M) _LTQTDYIDM(Oxidation (M))_ REV__ENSG00000125844|ENST00000377813|RRBP1;REV__nc|ENSG00000125844|Q9P2E9-3|RRBP1 12.531546534597751 0.4974689918368763 3 {I|L} 1 -1 15.485 0.0 0.0 1.3894 0.0 0.0 983.3914424243322 0.0 983.3914424243322 0.0 0.1324252614996588 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3894 + + 194 + 1 1.048 84296.6 1.0 12394 5747 18131 HBL1_DMSO_200M_050219_1,18143 HBL1_DMSO_200M_050219_1,18143,LTQTDYIDM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18144 86.739 661.0 134740.0 25 0 34981.0 18469 KYILRWRPVSI 11 128 715.9370092271929 1429.8594655211857 2 715.9360229372978 MULTI CID FTMS 0 0 0 18131 156304.46875 0.6019040616471923 -2 0.1818313598632812 13 Unmodified _KYILRWRPVSI_ nc|ENSG00000115414|P02751-16|FN1;nc|ENSG00000115414|P02751-2|FN1 2.9952420565917617 0.861016188266951 3 {[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))S]{I|L}{I|L} 6 9 11.851 0.0 0.0 0.82881 0.0 0.0 0.0 711.4796186796419 711.4796186796419 0.8817399073185435 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.0 0.5451140161145328 {[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))S]{I|L}{I|L} 0.82881 - 385 1 1.048 74140.2 1.0 12395 5747 18131 HBL1_DMSO_200M_050219_1,18144 HBL1_DMSO_200M_050219_1,18144,KYILRWRPVSI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 18145 86.752 722.0 214210.0 25 0 19266.0 -1 SQCESEDLGI 10 197 569.2386768171845 1136.4628007011688 2 569.2403442263603 MULTI CID FTMS 0 0 0 18131 148341.96875 0.2497079691517791 4 -0.3676071166992187 14 Carbamidomethyl (C) _SQC(Carbamidomethyl (C))ESEDLGI_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 14.838274106304384 0.5985701837916485 3 GP{I|L}G{I|L} 5 -1 22.167 0.0 0.0 1.9505 0.0 0.0 681.1932827341751 0.0 681.1932827341751 0.0 9.414697248863725 0.0 0.0 0 0.0 0.0 0.0 0.0 GP{I|L}G{I|L} 1.9505 - 901 + 1 1.048 118482.9 1.0 12396 5747 18131 HBL1_DMSO_200M_050219_1,18145 HBL1_DMSO_200M_050219_1,18145,SQCESEDLGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18146 86.764 737.0 339230.0 25 0 33526.0 + 31506 RQFSTPFQL 9 184 562.2985918194016 1122.5826307056032 2 562.2993652224541 MULTI CID FTMS 0 0 0 18131 162935.671875 0.2918678622001016 -3 0.239990234375 15 Unmodified _RQFSTPFQL_ ENSG00000143442|ENST00000271715|POGZ;nc|ENSG00000143442|Q7Z3K3-2|POGZ;nc|ENSG00000143442|Q7Z3K3-3|POGZ;nc|ENSG00000143442|Q7Z3K3-5|POGZ;nc|ENSG00000143442|Q7Z3K3-6|POGZ;nc|ENSG00000143442|Q7Z3K3-7|POGZ 45.69961567697781 0.0497987121815769 3 {[VA]|[{I|L}G]}A[YN]T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L} 10 5 + 41.131 0.0 0.0 3.6639 3.6639 68.483 0.0 0.0 0.0 0.142805910463089 14.979750410500898 0.142805910463089 0.1519536340204297 0 0.8494850021680094 1.154901959985743 0.3807196863200844 0.3054621874040891 {[VA]|[{I|L}G]}A[YN]T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}KV{[CT]|[{M(Oxidation (M))|F}G]}DQ{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}K[R{M(Oxidation (M))|F}]DQ{I|L};{[TV]|[{I|L}S]}[KC]ST{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[NS]T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L};[Q{I|L}][YN]T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L};{[VA]|[{I|L}G]}AM[QT][YV]Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TSGEKV;[YV]QQT{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L};{[SA]|[TG]}TD[R{M(Oxidation (M))|F}]KW{I|L} 3.6639;3.6504;3.648;3.4652;3.3958;3.2615;3.2072;3.1508;3.1228;2.9714 -;-;-;-;-;-;-;-;-;- 4488 1 1.048 192147.2 1.0 12397 5747 18131 HBL1_DMSO_200M_050219_1,18146 HBL1_DMSO_200M_050219_1,18146,RQFSTPFQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18148 86.769 24.0 2036200.0 25 0 223880.0 + 30025 QTPEFFQDV 9 84 555.7584846907921 1109.502416448384 2 555.7587158083916 MULTI CID FTMS 0 0 0 18147 2523611.0 0.9842745316759818 1 -0.0961837768554687 1 Unmodified _QTPEFFQDV_ ENSG00000169710|ENST00000306749|FASN 58.6788170122104 0.0268135626297836 3 [EP]TQ{M(Oxidation (M))|F}E 6 6 42.33 0.0 0.0 3.8152 0.0 0.0 0.0 375.15180544668414 375.15180544668414 12.631740484369232 0.0 0.0 0.0 0 0.0 1.0 1.066901560044258 0.8807196863200843 [EP]TQ{M(Oxidation (M))|F}E 3.8152 - 558 1 1.061 48077.0 1.0 12398 5748 18147 HBL1_DMSO_200M_050219_1,18148 HBL1_DMSO_200M_050219_1,18148,QTPEFFQDV True True QTPEFFQDV 86.768839 555.758715808392 83897526.0 18147.0 ENSG00000169710|ENST00000306749|FASN 7.203310966491699 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18149 86.772 151.0 775670.0 25 0 40170.0 -1 0 122 1030.1650534537205 3087.4733309613616 3 1030.166064441204 MULTI CID FTMS 0 0 0 18147 1181523.75 0.4536911680891989 3 -0.2907180786132812 2 3 [MN]P{[QV]|[N{I|L}]|[RA]|[KV]}NNEDTPTQ 13 -1 55.007 0.0 0.0 1.7816 0.0 0.0 0.0 1615.747625475597 1615.747625475597 20.926940337272995 0.0 0.0 0.0 0 0.0 2.0 0.5 0.2887254899964357 [MN]P{[QV]|[N{I|L}]|[RA]|[KV]}NNEDTPTQ 1.7816 - 18628 1 1.061 80007.8 1.0 12399 5748 18147 HBL1_DMSO_200M_050219_1,18149 HBL1_DMSO_200M_050219_1,18149, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18150 86.773 41.0 1956000.0 25 0 298060.0 + 42060 NIIPRFVQV 9 82 543.3267709483335 1084.638988963467 2 543.3272582888603 MULTI CID FTMS 0 0 0 18147 1307656.375 0.8125237184281798 1 -0.0961837768554687 3 Unmodified _VQVLRRDSL_ ENSG00000171943|ENST00000367123|SRGAP2C;nc|ENSG00000196369|P0DMP2|SRGAP2B;ENSG00000196369|ENST00000641863|SRGAP2B;ENSG00000266028|ENST00000573034|SRGAP2 43.85829265575387 0.0542763391141878 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[WT]|[RM]}{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]} 9 5 + 47.342 0.0 0.0 4.3648 4.3648 85.993 0.0 0.0 0.0 3.4016622314967293 35.123337350737245 3.4016622314967293 33.45098040014257 0 1.1989700043360187 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[WT]|[RM]}{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}V]Q{[WT]|[RM]}{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}V]{[WT]|[RM]}Q{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}V][AG]{[WT]|[RM]}{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]} 4.3648;1.2807;0.56688;0.43172 -;-;-;- 138 1 1.061 66610.5 1.0 12400 5748 18147 HBL1_DMSO_200M_050219_1,18150 HBL1_DMSO_200M_050219_1,18150,VQVLRRDSL True False NIIPRFVQV 86.773064 543.32725828886 14334908.0 18147.0 ENSG00000171943|ENST00000367123|SRGAP2C;;nc|ENSG00000196369|P0DMP2|SRGAP2B;;ENSG00000196369|ENST00000641863|SRGAP2B;;ENSG00000266028|ENST00000573034|SRGAP2 5.419366359710693 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18151 86.776 141.0 600050.0 25 0 59012.0 + 1719 ALPPVLTTV 9 93 455.784122799429 909.553692665658 2 455.7843505740166 MULTI CID FTMS 0 0 0 18147 764905.125 0.6308117389245305 3 -0.2907180786132812 4 Unmodified _ALPPVLTTV_ ENSG00000155506|ENST00000518297|LARP1 46.92087301778293 0.0471210510596396 3 [VP]P{I|L}TTV[{I|L}A] 9 5 + 42.01 0.0 0.0 4.6188 4.6188 80.71 0.0 0.0 0.0 9.38547520912806 12.076250458449138 9.38547520912806 6.98970004336018 0 0.0 0.7958800173440752 1.5 0.0 [VP]P{I|L}TTV[{I|L}A];[VP]{I|L}PTTV[{I|L}A];{[HG]|PP}V{I|L}TTV[{I|L}A];[{I|L}P]VPTTV[{I|L}A];[VP]P{I|L}S[{I|L}T][{I|L}A];[VP]PVT[{I|L}T][{I|L}A];[VP]{I|L}PS[{I|L}T][{I|L}A];{[HG]|PP}V{I|L}S[{I|L}T][{I|L}A] 4.6188;3.8503;3.3307;2.6153;1.5952;1.0706;0.82668;0.30712 -;-;-;-;-;-;-;- 441 1 1.061 66652.2 1.0 12401 5748 18147 HBL1_DMSO_200M_050219_1,18151 HBL1_DMSO_200M_050219_1,18151,ALPPVLTTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18152 86.782 360.0 1023900.0 25 0 73303.0 + 4419 DAVTAFESI 9 224 476.73468053466337 951.4548081361268 2 476.7351867556572 MULTI CID FTMS 0 0 0 18147 711683.9375 0.4856008623243233 3 -0.2907180786132812 5 Unmodified _DAVTAFESI_ ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1 57.47134341890925 0.0274820932774257 3 {[DA]|[EG]}VTA{M(Oxidation (M))|F} 6 3 30.06 0.0 0.0 3.1593 0.0 0.0 0.0 344.1442361969268 344.1442361969268 8.333267986193675 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.274227503252014 0.0 + {[DA]|[EG]}VTA{M(Oxidation (M))|F} 3.1593 + + 1334 1 1.061 275119.7 1.0 12402 5748 18147 HBL1_DMSO_200M_050219_1,18152 HBL1_DMSO_200M_050219_1,18152,DAVTAFESI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18153 86.785 146.0 591670.0 25 0 119130.0 + 19003 LDIQRRQILP 10 89 626.3801458917122 1250.7457388502244 2 626.3801757693291 MULTI CID FTMS 0 0 0 18147 577908.5 0.544685862421717 3 -0.2907180786132812 6 Unmodified _LDIQRRQILP_ REV__ENST00000554558.5_1_14:55966046-56046785:-|nuORF 6.2057823575117 0.6979311171683138 3 {I|L} 1 -1 9.6041 0.0 0.0 0.76787 0.0 0.0 1119.6505983246368 0.0 1119.6505983246368 0.0 0.8316571088326263 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.76787 + + 49 + 1 1.061 67314.4 1.0 12403 5748 18147 HBL1_DMSO_200M_050219_1,18153 HBL1_DMSO_200M_050219_1,18153,LDIQRRQILP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18154 86.793 409.0 1065800.0 25 0 601840.0 22260 LPRLTPPVL 9 83 1005.645831049666 1004.638554583066 1 1005.647509753704 MULTI CID FTMS 0 0 0 18147 509984.25 0.946034047147341 3 -0.2907180786132812 7 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 38.17557092003332 0.0854718145212029 3 {I|L}PR{I|L}TT 6 4 48.382 0.0 0.0 4.8159 0.0 0.0 0.0 320.1980074518188 320.1980074518188 33.68948444925195 0.0 0.0 0.0 0 1.4291746928241125 1.2218487496163564 0.4247425010840047 0.0 {I|L}PR{I|L}TT 4.8159 - 640 + 1 1.061 282973.8 1.0 12404 5748 18147 HBL1_DMSO_200M_050219_1,18154 HBL1_DMSO_200M_050219_1,18154,LPRLTPPVL True True IPLPLEPQV 86.792656 1005.6475097537 3501535.0 18147.0 ENSG00000078142|ENST00000262039|PIK3C3 4.943573156992595 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18155 86.795 85.0 1002900.0 25 0 70239.0 + 36590 TALYIWYL 8 100 521.7861965596289 1041.5578401860578 2 521.7872192263603 MULTI CID FTMS 0 0 0 18147 508554.34375 0.5460866395750912 -1 0.0768890380859375 8 Unmodified _TALYIWYL_ REV__ENST00000549850.1_1_14:31917543-31917612:-|nuORF 15.768221252438446 0.6779680726941459 3 [TA]{I|L}{M(Oxidation (M))|F}W{I|L} 6 -1 39.486 0.0 0.0 3.7911 0.0 0.0 0.0 307.1525972955688 307.1525972955688 24.882287586051103 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [TA]{I|L}{M(Oxidation (M))|F}W{I|L} 3.7911 - 218 + 1 1.061 72898.7 1.0 12405 5748 18147 HBL1_DMSO_200M_050219_1,18155 HBL1_DMSO_200M_050219_1,18155,TALYIWYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18156 86.798 165.0 385240.0 25 0 70225.0 + 17770 KQFEPNDFYL 10 88 650.8136907470873 1299.6128285609743 2 650.8129150271416 MULTI CID FTMS 0 0 0 18147 488967.90625 0.2051257132938786 4 -0.4059524536132812 9 Unmodified _KQFEPNDFYL_ ENSG00000101126|ENST00000621696|ADNP 51.41523569358685 0.0718446036348414 3 [KQ]{M(Oxidation (M))|F}E[NP]D{M(Oxidation (M))|F}Y{I|L} 10 0 + 55.894 0.0 0.0 4.3009 4.3009 76.002 0.0 0.0 0.0 9.49401151747452 40.18114684785509 9.49401151747452 3.521825181113627 0 1.0 0.0 0.3252574989159953 1.1549471895720984 + + [KQ]{M(Oxidation (M))|F}E[NP]D{M(Oxidation (M))|F}Y{I|L};[KQ]{M(Oxidation (M))|F}EYY{M(Oxidation (M))|F}Y{I|L};[YT][H{I|L}][QT]D{M(Oxidation (M))|F}Y{I|L};{[HG]|PP}[HN]Y[H{I|L}]{M(Oxidation (M))|F}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}D{[{M(Oxidation (M))|F}C]|[YS]}[KA]Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}[KC][W{M(Oxidation (M))|F}]Y{I|L};[KQ]{M(Oxidation (M))|F}E[NP][MN][RH] 4.3009;4.0299;3.4236;1.8641;1.859;1.6273;1.1027 +;-;-;-;-;-;- + 227 1 1.061 52811.5 1.0 12406 5748 18147 HBL1_DMSO_200M_050219_1,18156 HBL1_DMSO_200M_050219_1,18156,KQFEPNDFYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18157 86.802 209.0 790170.0 25 0 144570.0 + 13206 HGLTVPLI 8 110 425.2631560955295 848.511759257859 2 425.2634765505791 MULTI CID FTMS 0 0 0 18147 453623.03125 0.1179885894882472 -3 0.2587203979492187 10 Unmodified _HGLTVPLI_ ENSG00000113732|ENST00000519374|ATP6V0E1 70.86452775946826 0.1107857762478427 3 {[HG]|PP}{I|L}TVP{I|L}{I|L} 8 0 + 61.124 0.0 0.0 7.2037 7.2037 85.419 0.0 0.0 0.0 3.679767852945943 16.40978057358332 3.679767852945943 3.679767852945943 0 1.1549471895720984 0.0 1.274227503252014 0.0 + + {[HG]|PP}{I|L}TVP{I|L}{I|L};[HV]ATVP{I|L}{I|L};{[HG]|PP}{I|L}S{I|L}P{I|L}{I|L};[HV]AS{I|L}P{I|L}{I|L};[{I|L}P]H{[VA]|[{I|L}G]}S{I|L}{I|L};[VP]GH[{I|L}T]{I|L}{I|L};{[HG]|PP}{I|L}[{I|L}P]S{I|L}{I|L};[HV]A[{I|L}P]S{I|L}{I|L};{[HG]|PP}[VP][{I|L}T]{I|L}{I|L};[HV][PG][{I|L}T]{I|L}{I|L} 7.2037;6.7701;6.4811;6.0475;5.4437;4.6356;3.5441;3.1104;2.8136;2.38 +;-;-;-;-;-;-;-;-;- + 418 1 1.061 131303.2 1.0 12407 5748 18147 HBL1_DMSO_200M_050219_1,18157 HBL1_DMSO_200M_050219_1,18157,HGLTVPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18158 86.811 497.0 272550.0 25 0 16034.0 + 245 AAYHPDFPTVL 11 136 615.8112986770915 1229.6080444209829 2 615.8114501833916 MULTI CID FTMS 0 0 0 18147 314603.625 1.0 0 0.0 11 Unmodified _AAYHPDFPTVL_ ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6 49.93300154707207 0.1180010809391383 3 [TP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{M(Oxidation (M))|F}[TP]V{I|L} 11 4 + 57.624 0.0 0.0 4.6864 4.6864 71.749 0.0 0.0 0.0 0.339322000954283 16.575773191777934 0.339322000954283 0.339322000954283 0 1.2302046884880935 1.0 1.6861818737241734 0.0 [TP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{M(Oxidation (M))|F}[TP]V{I|L};{[QN]|[E{I|L}]|[KN]}{[CP]|[EA]}PD{M(Oxidation (M))|F}[TP]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DV]PD{M(Oxidation (M))|F}[TP]V{I|L};[{I|L}P][EC]PD{M(Oxidation (M))|F}[TP]V{I|L};AA{[WN]|[YH]}PD{M(Oxidation (M))|F}[TP]V{I|L};[TP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PHP[EP]V{I|L};{[QN]|[E{I|L}]|[KN]}{[CP]|[EA]}PHP[EP]V{I|L};[VP]MDPD{M(Oxidation (M))|F}[TP]V{I|L};[TP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PH[WH]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DV]PHP[EP]V{I|L} 4.6864;4.6588;4.3912;4.1047;3.9615;3.8835;3.8559;3.7039;3.5935;3.5883 -;-;-;-;+;-;-;-;-;- + 1620 1 1.061 101624.8 1.0 12408 5748 18147 HBL1_DMSO_200M_050219_1,18158 HBL1_DMSO_200M_050219_1,18158,AAYHPDFPTVL True True AAYHPDFPTVL 86.810572 615.811450183392 2873678.5 18147.0 nc|ENSG00000163029|Q96SB8-2|SMC6;;ENSG00000163029|ENST00000448223|SMC6 7.693569183349609 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18159 86.82 510.0 405500.0 25 0 40400.0 + 34833 SQFQQEFPSL 10 168 605.7908993268463 1209.5672457204926 2 605.7908813357353 MULTI CID FTMS 0 0 0 18147 309261.90625 0.0866677987226625 -3 0.2587203979492187 12 Unmodified _SQFQQEFPSL_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 137.42381684818497 0.0001758737001145 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EQSQ{M(Oxidation (M))|F} 7 7 80.27 0.0 0.0 6.6363 0.0 0.0 0.0 312.1574340291192 312.1574340291192 16.55046652675661 0.0 0.0 0.0 0 1.0 0.5528419686577808 1.7614393726401687 1.9916440611282624 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EQSQ{M(Oxidation (M))|F} 6.6363 - 15752 1 1.061 147298.4 1.0 12409 5748 18147 HBL1_DMSO_200M_050219_1,18159 HBL1_DMSO_200M_050219_1,18159,SQFQQEFPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18160 86.83 571.0 282810.0 25 0 13091.0 + 10730 FYFDRDDVAL 10 166 630.7982582950626 1259.5819636569252 2 630.7984496951103 MULTI CID FTMS 0 0 0 18147 215750.875 0.1572954299665899 5 -0.4920272827148437 13 Unmodified _FYFDRDDVAL_ ENSG00000087086|ENST00000331825|FTL 37.07464296494664 0.1884581770199685 3 {NN|[MP]|[D{I|L}]|[EV]}TG{M(Oxidation (M))|F}DY{M(Oxidation (M))|F}VA{I|L} 11 7 + 55.865 0.0 0.0 4.4352 4.4352 77.521 0.0 0.0 0.0 6.609926217009452 7.540340280231135 6.609926217009452 4.485718406190244 0 0.805462187404089 1.5228787452803376 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}TG{M(Oxidation (M))|F}DY{M(Oxidation (M))|F}VA{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DYY{I|L};{[TV]|[{I|L}S]}AD{M(Oxidation (M))|F}DY{M(Oxidation (M))|F}VA{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{M(Oxidation (M))|F}YE;{NN|[MP]|[D{I|L}]|[EV]}TG{M(Oxidation (M))|F}DYV{M(Oxidation (M))|F}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}TG{M(Oxidation (M))|F}DVY{M(Oxidation (M))|F}A{I|L};{[TV]|[{I|L}S]}EG{M(Oxidation (M))|F}DY{M(Oxidation (M))|F}VA{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DY{M(Oxidation (M))|F}E;{NN|[MP]|[D{I|L}]|[EV]}V[R{M(Oxidation (M))|F}]GDYY{I|L};[{I|L}A]SD{M(Oxidation (M))|F}DY{M(Oxidation (M))|F}VA{I|L} 4.4352;4.0791;3.9104;3.8365;3.7147;3.7147;3.7014;3.5378;3.5241;3.4086 -;-;-;-;-;-;-;-;-;- 3038 1 1.061 122532.7 1.0 12410 5748 18147 HBL1_DMSO_200M_050219_1,18160 HBL1_DMSO_200M_050219_1,18160,FYFDRDDVAL False True FYFDRDDVAL 86.829595 630.79844969511 25000864.0 18147.0 ENSG00000087086|ENST00000331825|FTL 5.793742497762044 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18161 86.832 105.0 585930.0 25 0 54230.0 + 39903 VFPPSFREL 9 83 546.2988014453283 0 546.2973510622978 PEAK CID FTMS 0 0 0 18147 156583.46875 0.5735482901335318 27 -2.738975524902344 14 Unmodified _VFPPSFREL_ ENSG00000101052|ENST00000373030|IFT52 13.90604991867851 0.2674652324371145 3 PP[EP]V{I|L} 6 6 16.273 0.0 0.0 1.4921 0.0 0.0 246.13828610560967 209.0574129693969 455.1956990750066 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 PP[EP]V{I|L} 1.4921 - 61 + 1 1.061 58696.0 1.0 12411 5748 18147 HBL1_DMSO_200M_050219_1,18161 HBL1_DMSO_200M_050219_1,18161,VFPPSFREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18162 86.847 800.0 206630.0 25 0 14325.0 + 23078 LSLQQPRVEL 10 208 394.8981210581048 0 394.8954955935478 PEAK CID FTMS 0 0 0 18147 147448.46875 1.0 0 0.0 15 Unmodified _LSLQQPRVEL_ REV__ENST00000513671.5_1_5:42566025-42629199:+|nuORF 20.580933911654288 0.2935917702031351 3 {I|L}K 2 -1 9.2525 0.0 0.0 1.1745 0.0 0.0 93.41550121422684 450.16318689517817 543.578688109405 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {I|L}K 1.1745 - 55 + 1 1.061 129284.9 0.7900000214576721 12412 5748 18147 HBL1_DMSO_200M_050219_1,18162 HBL1_DMSO_200M_050219_1,18162,LSLQQPRVEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18163 86.861 800.0 252770.0 25 0 32233.0 + 21711 LPLSIAPL 8 200 412.2680075726272 822.5214622120543 2 412.2677795290947 MULTI CID FTMS 0 0 0 18147 131618.78125 0.1111011488169437 5 -0.4920272827148437 16 Unmodified _LPLSIAPL_ REV__ENST00000275767.3_1_7:134832846-134832921:+|nuORF 56.04830969593885 0.114297258605095 3 [{I|L}P]VT{I|L} 5 -1 44.926 0.0 0.0 5.462 0.0 0.0 0.0 296.16134554560705 296.16134554560705 29.441811241770125 0.0 0.0 0.0 0 0.7887254899964358 1.6989700043360187 0.6861818737241735 0.0 [{I|L}P]VT{I|L} 5.462 - 298 1 1.061 156281.5 0.699999988079071 12413 5748 18147 HBL1_DMSO_200M_050219_1,18163 HBL1_DMSO_200M_050219_1,18163,LPLSIAPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18165 86.865 3.0 18785000.0 25 0 1392200.0 + 22257 LPRLTPPVL 9 70 503.326445046479 1004.638337159758 2 503.3269836306572 MULTI CID FTMS 0 0 0 18164 15753961.0 0.5465431528353393 2 -0.1945343017578125 1 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 58.6788170122104 0.0268135626297836 3 [{I|L}P]RT{I|L}PPV{I|L} 9 2 + 78.146 0.0 0.0 7.7785 7.7785 91.605 0.0 0.0 0.0 21.12704280191288 61.948369152330685 21.12704280191288 8.699112850717938 0 1.274227503252014 1.3979400086720375 1.1861818737241734 0.0 [{I|L}P]RT{I|L}PPV{I|L};[{I|L}P][{I|L}T]RPPV{I|L};[{I|L}P]RTP{I|L}PV{I|L};[{I|L}P]RTPP{I|L}V{I|L};[{I|L}P]RTPPV{I|L}{I|L};[{I|L}P]R[VP]PT{I|L}{I|L} 7.7785;6.9127;6.0835;5.057;4.0788;3.7106 -;-;-;-;-;- 350 1 1.073 51343.9 1.0 12414 5749 18164 HBL1_DMSO_200M_050219_1,18165 HBL1_DMSO_200M_050219_1,18165,LPRLTPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18166 86.866 16.0 3598100.0 25 0 459580.0 + 42560 VTPPGFQLV 9 84 479.27393325796805 956.533313582736 2 479.2741577029228 MULTI CID FTMS 0 0 0 18164 3241692.25 0.9307591704776048 2 -0.1945343017578125 2 Unmodified _VTPPGFQLV_ ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6 39.957323273325 0.0756908302845263 3 {[TV]|[{I|L}S]}YY{I|L}S 6 6 41.215 0.0 0.0 4.3088 0.0 0.0 0.0 227.13936762009865 227.13936762009865 25.017346757967545 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}YY{I|L}S 4.3088 - 154 1 1.073 48158.6 1.0 12415 5749 18164 HBL1_DMSO_200M_050219_1,18166 HBL1_DMSO_200M_050219_1,18166,VTPPGFQLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18167 86.867 27.0 2185800.0 25 0 311910.0 + 21052 LPAELINQI 9 88 505.79747336813 1009.58039380306 2 505.7976867556572 MULTI CID FTMS 0 0 0 18164 1242276.75 0.0503501208579532 7 -0.6978912353515625 3 Unmodified _LPAELINQI_ ENSG00000160877|ENST00000292431|NACC1 39.957323273325 0.0756908302845263 3 [{I|L}P]{[CP]|[EA]}{I|L}{I|L}N[Q{I|L}] 9 0 + 27.301 0.0 0.0 2.7042 2.7042 70.915 0.0 0.0 0.0 2.9563496377727496 4.762036441594194 2.9563496377727496 2.9563496377727496 0 0.0 1.5228787452803376 0.3252574989159953 0.0 + + [{I|L}P]{[CP]|[EA]}{I|L}{I|L}N[Q{I|L}];[PA]E{I|L}{I|L}{I|L}N[Q{I|L}];[{I|L}P]{[CP]|[EA]}{I|L}{I|L}GG[Q{I|L}];[VP][DV]{I|L}{I|L}N[Q{I|L}];[PA]E{I|L}{I|L}{I|L}GG[Q{I|L}];{I|L}{I|L}E[PA]{I|L}N[Q{I|L}];[VP][DV]{I|L}{I|L}GG[Q{I|L}] 2.7042;2.4114;1.7921;1.5446;1.4993;0.8523;0.63256 +;-;-;-;-;-;- + 196 1 1.073 52349.5 1.0 12416 5749 18164 HBL1_DMSO_200M_050219_1,18167 HBL1_DMSO_200M_050219_1,18167,LPAELINQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18168 86.869 94.0 909260.0 25 0 104010.0 + 39541 VAWLVAHV 8 100 447.763616461708 893.5126799902159 2 447.7638732790947 MULTI CID FTMS 0 0 0 18164 644111.125 0.3989034370455582 2 -0.1945343017578125 4 Unmodified _VAWLVAHV_ ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24 64.08090720244739 0.1161809961245979 3 VAW{I|L}VAHV 8 0 + 79.653 0.0 0.0 8.9146 8.9146 95.492 0.0 0.0 0.0 54.73734592459908 9.305785912415317 9.305785912415317 10.41392685158226 0 1.221097372081425 1.6989700043360187 0.0 0.0 + + VAW{I|L}VAHV;VAW{I|L}{I|L}GHV;VAEG{I|L}{I|L}[RH];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}H[R{I|L}];{[VA]|[{I|L}G]}H{I|L}{[DA]|[EG]}[R{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VH[R{I|L}];[HA]V{I|L}{[DA]|[EG]}[R{I|L}];[HV]A{I|L}{[DA]|[EG]}[R{I|L}] 8.9146;7.7491;6.5327;3.2215;2.836;2.3762;1.2414;0.047338 +;-;-;-;-;-;-;- + 223 + 1 1.073 70168.0 1.0 12417 5749 18164 HBL1_DMSO_200M_050219_1,18168 HBL1_DMSO_200M_050219_1,18168,VAWLVAHV True True VAWLVAHV 86.86942 447.763873279095 23117490.0 18164.0 nc|ENSG00000008838|O75448-2|MED24;;ENSG00000008838|ENST00000394128|MED24 11.252602577209473 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18169 86.871 51.0 1026200.0 25 0 120650.0 + + 42674 SLFPGKLEV 9 75 495.28712988099016 988.5597068287803 2 495.2881652712822 MULTI CID FTMS 0 0 0 18164 656474.1875 0.5910964121558152 -2 0.1730728149414062 5 Unmodified _VTVRSVESI_ nc|ENSG00000177731|Q13045-3|FLII;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENSG00000177731|ENST00000327031|FLII;nc|ENSG00000177731|Q13045-2|FLII 29.081581746732265 0.1611639662936252 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}P 7 -1 48.738 0.0 0.0 4.9302 0.0 0.0 0.0 182.0937441461547 182.0937441461547 36.26369201519022 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}P 4.9302 - 102 + 1 1.073 46197.5 1.0 12418 5749 18164 HBL1_DMSO_200M_050219_1,18169 HBL1_DMSO_200M_050219_1,18169,VTVRSVESI False False SLFPGKLEV 86.870767 495.288165271282 17554648.0 18164.0 nc|ENSG00000177731|Q13045-3|FLII;;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;nc|ENSG00000177731|Q13045-2|FLII 3.5623389879862466 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18170 86.874 175.0 617160.0 25 0 85340.0 + 36267 SYFEKGPLTF 10 129 594.8004201189841 1187.586287304768 2 594.8007690310478 MULTI CID FTMS 0 0 0 18164 429114.25 0.3505594079819261 -1 0.0961837768554687 6 Unmodified _SYFEKGPLTF_ ENSG00000172687|ENST00000683779|ZNF738;ENSG00000197020|ENST00000358296|ZNF100;nc|ENSG00000172687|Q8NE65-2|ZNF738 70.33199760932243 0.018925923965799 3 {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}EKG[{I|L}P]T{M(Oxidation (M))|F} 10 0 + 60.5 0.0 0.0 5.0944 5.0944 86.566 0.0 0.0 0.0 7.269987279362624 13.483492301524436 7.269987279362624 13.483492301524436 0 1.1861818737241734 0.0 1.8283409326844269 0.0 + + {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}EKG[{I|L}P]T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[Y{I|L}]GKE{M(Oxidation (M))|F}[MT];[{I|L}T][YV]GKE{M(Oxidation (M))|F}[MT];{[TV]|[{I|L}S]}[Y{I|L}]GKEMT{M(Oxidation (M))|F};[{I|L}T][YV]GKEMT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{I|L}GKEMT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{I|L}GKE{M(Oxidation (M))|F}[MT];[{I|L}T][YR]KEE{[{M(Oxidation (M))|F}C]|[YS]};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}EK[YR]PV;{[TV]|[{I|L}S]}[PA]K{M(Oxidation (M))|F}{M(Oxidation (M))|F}E{[{M(Oxidation (M))|F}C]|[YS]} 5.0944;3.959;3.8004;3.69;3.5314;3.4484;2.9758;2.9679;2.9439;2.7415 +;-;-;-;-;-;-;-;-;- + 1946 + 1 1.073 85189.8 1.0 12419 5749 18164 HBL1_DMSO_200M_050219_1,18170 HBL1_DMSO_200M_050219_1,18170,SYFEKGPLTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18171 86.876 80.0 630250.0 25 0 66697.0 39982 VGAVELLLNH 10 96 532.8088799324801 1063.60320693176 2 532.8086425662041 MULTI CID FTMS 0 0 0 18164 340944.15625 0.037787966390688 7 -0.6978912353515625 7 Unmodified _VGAVELLLNH_ ENSG00000133107|ENST00000379705|TRPC4;nc|ENSG00000133107|Q9UBN4-2|TRPC4;nc|ENSG00000133107|Q9UBN4-3|TRPC4;nc|ENSG00000133107|Q9UBN4-4|TRPC4;nc|ENSG00000133107|Q9UBN4-5|TRPC4;nc|ENSG00000133107|Q9UBN4-6|TRPC4;nc|ENSG00000133107|Q9UBN4-7|TRPC4 13.90604991867851 0.6142120002215601 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}HN{I|L} 9 6 + 39.771 0.0 0.0 3.7393 3.7393 74.879 0.0 0.0 0.0 27.552326482129573 3.8409513195288696 3.8409513195288696 3.881801713828814 0 0.4247425010840047 2.0 0.0 0.5 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}HN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}HQV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}HGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}H[AG]V 3.7393;3.3743;2.4034;2.0384 -;-;-;- 125 + 1 1.073 43666.4 1.0 12420 5749 18164 HBL1_DMSO_200M_050219_1,18171 HBL1_DMSO_200M_050219_1,18171,VGAVELLLNH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18172 86.885 524.0 326150.0 25 0 18844.0 -1 PMYFFLCNL 9 170 602.781301781454 1203.548050629708 2 602.7822143435478 MULTI CID FTMS 0 0 0 18164 317046.875 0.512788294628528 -1 0.0961837768554687 8 Carbamidomethyl (C) _PMYFFLC(Carbamidomethyl (C))NL_ ENSG00000166368|ENST00000299459|OR2D2;ENSG00000172459|ENST00000624596|OR5AR1;ENSG00000186943|ENST00000335040|OR13C8;ENSG00000221931|ENST00000327930|OR6X1;ENSG00000255804|ENST00000540461|OR6J1 23.1484247019978 0.2366544122328345 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHYP{I|L}M{M(Oxidation (M))|F} 9 -1 + 65.894 0.0 0.0 5.475 5.475 75.858 0.0 0.0 0.0 4.506506310624154 4.506506310624154 4.506506310624154 1.134993639681312 0 0.3807196863200844 2.0 1.0994850021680094 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHYP{I|L}M{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MA[KG]{M(Oxidation (M))|F}{I|L}M{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHYPM{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MA[KG]{M(Oxidation (M))|F}M{I|L}{M(Oxidation (M))|F};MPYAY{[WN]|[YH]}{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[KG]A{M(Oxidation (M))|F}{I|L}M{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HH{M(Oxidation (M))|F}{I|L}{I|L}M{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HH{I|L}{M(Oxidation (M))|F}{I|L}M{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHY{I|L}PM{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[KQ]{M(Oxidation (M))|F}{I|L}M{M(Oxidation (M))|F} 5.475;5.3807;5.2911;5.1968;5.1006;5.0644;5.0075;4.9547;4.9345;4.9181 -;-;-;-;-;-;-;-;-;- 5497 1 1.073 127316.6 1.0 12421 5749 18164 HBL1_DMSO_200M_050219_1,18172 HBL1_DMSO_200M_050219_1,18172,PMYFFLCNL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18173 86.895 556.0 259200.0 25 0 50990.0 -1 0 133 1010.8115071988376 3029.412692196712 3 1011.47960203886 MULTI CID FTMS 0 0 0 18164 285737.84375 0.1954004696136351 4 -0.395843505859375 9 3 [MN][YG]H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y 8 -1 35.463 0.0 0.0 1.1706 0.0 0.0 0.0 2016.9959419314605 2016.9959419314605 4.325899953472639 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 [MN][YG]H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y 1.1706 - 2937 + 1 1.073 96914.3 1.0 12422 5749 18164 HBL1_DMSO_200M_050219_1,18173 HBL1_DMSO_200M_050219_1,18173, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18174 86.905 578.0 392460.0 25 0 16175.0 -1 0 134 1066.5046868705456 2130.994820807892 2 1067.007495105267 MULTI CID FTMS 0 0 0 18164 248758.046875 0.7146525518375673 2 -0.1945343017578125 10 3 [{I|L}T]AGDREYC(Carbamidomethyl (C)) 9 -1 34.629 0.0 0.0 1.625 0.0 0.0 0.0 1062.4896687905664 1062.4896687905664 1.1596979093086404 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.372363747448347 0.0 [{I|L}T]AGDREYC(Carbamidomethyl (C)) 1.625 - 19301 1 1.073 140079.1 1.0 12423 5749 18164 HBL1_DMSO_200M_050219_1,18174 HBL1_DMSO_200M_050219_1,18174, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18175 86.916 637.0 355910.0 25 0 38278.0 -1 0 169 1023.8282673808724 3068.4629727428173 3 1023.832446277142 MULTI CID FTMS 0 0 0 18164 192869.71875 0.8640514581092616 -1 0.0961837768554687 11 3 [MN]MVNAS 7 -1 81.955 0.0 0.0 2.6709 0.0 0.0 0.0 2318.0830470239634 2318.0830470239634 60.563494771827685 0.0 0.0 0.0 0 0.3054621874040891 2.0 1.6549471895720984 0.7614393726401688 [MN]MVNAS 2.6709 - 12422 + 1 1.073 144124.9 1.0 12424 5749 18164 HBL1_DMSO_200M_050219_1,18175 HBL1_DMSO_200M_050219_1,18175, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18176 86.928 661.0 217800.0 25 0 6782.0 -1 0 132 796.7056505359423 2387.0951222080266 3 797.3727905154228 MULTI CID FTMS 0 0 0 18164 188196.65625 1.0 0 0.0 12 3 {[HG]|PP}YPMR{I|L}{I|L}{I|L} 9 -1 28.836 0.0 0.0 1.208 0.0 0.0 0.0 1303.4712786841008 1303.4712786841008 4.23451813625956 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {[HG]|PP}YPMR{I|L}{I|L}{I|L} 1.208 - 7976 1 1.073 107025.9 1.0 12425 5749 18164 HBL1_DMSO_200M_050219_1,18176 HBL1_DMSO_200M_050219_1,18176, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18177 86.942 800.0 242190.0 25 0 12540.0 21739 LPMAQEIFRL 10 171 406.561890598792 1216.663842396576 3 406.5617248415947 MULTI CID FTMS 0 0 0 18164 143024.625 1.0 0 0.0 13 Unmodified _LPMAQEIFRL_ ENSG00000115459|ENST00000409013|ELMOD3;ENST00000410106.5_1_2:85598540-85618082:+|nuORF;ENST00000490508.5_1_2:85582731-85618082:+|nuORF;nc|ENSG00000115459|Q96FG2-2|ELMOD3;nc|ENSG00000115459|Q96FG2-6|ELMOD3 10.150570793230772 0.6772252923741907 3 CP{I|L}VER{I|L} 7 6 37.266 0.0 0.0 3.063 0.0 0.0 388.2116728390072 0.0 388.2116728390072 0.0 11.323718098120416 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.2396518287104437 CP{I|L}VER{I|L} 3.063 - 603 + 1 1.073 153633.9 0.75 12426 5749 18164 HBL1_DMSO_200M_050219_1,18177 HBL1_DMSO_200M_050219_1,18177,LPMAQEIFRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18178 86.957 800.0 219600.0 25 0 22373.0 + 42788 VVISSDGQFAL 11 209 568.3032507927411 1134.591948652282 2 568.3038207888603 MULTI CID FTMS 0 0 0 18164 117215.859375 0.0173654475645921 23 -2.33538818359375 14 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 27.628801355627647 0.4434699450731472 3 VV{I|L}S[{M(Oxidation (M))|F}E][SG]NA{I|L} 11 4 + 28.677 0.0 0.0 2.5275 2.5275 66.333 0.0 0.0 0.0 9.424038817067778 -5.804074772359019 -5.804074772359019 0.2165251409206092 0 0.6237125054200234 1.3979400086720375 0.0 0.0 VV{I|L}S[{M(Oxidation (M))|F}E][SG]NA{I|L};VV{I|L}S[{M(Oxidation (M))|F}E][SG]V[QA];VV{I|L}[HA]{[YC]|[HE]}{M(Oxidation (M))|F}A{I|L};VV{[YD]|[{M(Oxidation (M))|F}M]}[Q{I|L}]TNA{I|L};VV{[YD]|[{M(Oxidation (M))|F}M]}[Q{I|L}]TV[QA];[{I|L}V]VS[{M(Oxidation (M))|F}E][SG]NA{I|L};[{I|L}V]VS[{M(Oxidation (M))|F}E][SG]V[QA];[DV]S{[QG]|[NA]}TVV{M(Oxidation (M))|F}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}[MD]{I|L}VV{M(Oxidation (M))|F}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}{I|L}[DC]{M(Oxidation (M))|F}A{I|L} 2.5275;2.5084;1.9455;1.0214;1.0024;0.80241;0.78333;0.74208;0.47976;0.4584 -;-;-;-;-;-;-;-;-;- 1762 1 1.073 134754.9 0.9300000071525574 12427 5749 18164 HBL1_DMSO_200M_050219_1,18178 HBL1_DMSO_200M_050219_1,18178,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18179 86.971 800.0 184100.0 25 0 17204.0 -1 0 144 675.0052690318989 2021.9939776958968 3 675.0062744021416 MULTI CID FTMS 0 0 0 18164 98459.375 0.8016533798816603 -1 0.0961837768554687 15 3 [QA][QA]Y{I|L}W 7 -1 25.233 0.0 0.0 1.2479 0.0 0.0 0.0 1158.5466337649991 1158.5466337649991 4.356281995293401 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 [QA][QA]Y{I|L}W 1.2479 - 1896 1 1.073 115229.3 0.949999988079071 12428 5749 18164 HBL1_DMSO_200M_050219_1,18179 HBL1_DMSO_200M_050219_1,18179, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18180 86.986 800.0 209250.0 25 0 11961.0 -1 0 180 620.3648562662661 619.357579799666 1 620.2759887576103 MULTI CID FTMS 0 0 0 -1 0 16 3 [{I|L}V]E{M(Oxidation (M))|F}{I|L} 5 -1 + 46.911 0.0 0.0 7.5742 7.5742 94.935 0.0 0.0 0.0 17.61551988564182 12.129843661361406 12.129843661361406 17.61551988564182 0 0.8494850021680094 1.3979400086720375 0.0 0.0 [{I|L}V]E{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}V{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{I|L};[{M(Oxidation (M))|F}E]{I|L}V{I|L} 7.5742;4.73;4.6945;3.2384;2.8889 -;-;-;-;- 433 1 1.073 120972.0 0.9100000262260436 12429 5749 18164 HBL1_DMSO_200M_050219_1,18180 HBL1_DMSO_200M_050219_1,18180, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18182 86.99 4.8 12520000.0 25 0 930500.0 + 29589 QLVDIIEKV 9 84 528.8186749961957 1055.6227970591913 2 528.8192016482353 MULTI CID FTMS 0 0 0 18181 11074142.0 0.6995220520330602 1 -0.0693130493164062 1 Unmodified _QLVDIIEKV_ ENSG00000131467|ENST00000590720|PSME3;ENST00000593111.1_1_17:40986588-40991030:+|nuORF;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3 57.72198328787511 0.0273433238377839 3 [Q{I|L}]VD{I|L}{I|L}EKV 9 0 + 71.195 0.0 0.0 6.7443 6.7443 94.517 0.0 0.0 0.0 48.74279020542129 11.478174818886371 11.478174818886371 62.34373489186523 0 0.4802046884880938 1.5228787452803376 0.4247425010840047 0.2302046884880938 + + [Q{I|L}]VD{I|L}{I|L}EKV;[Q{I|L}]V[R{M(Oxidation (M))|F}][{I|L}A][{I|L}P] 6.7443;0.83845 +;- + 201 + 1 1.08 53225.1 1.0 12430 5750 18181 HBL1_DMSO_200M_050219_1,18182 HBL1_DMSO_200M_050219_1,18182,QLVDIIEKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18183 86.991 6.2 7379600.0 25 0 1107900.0 -1 LIDIAADWMT 10 68 582.7853227646449 1163.5560925960897 2 582.7859985232353 MULTI CID FTMS 0 0 0 18181 7984216.0 0.94555910709612 1 -0.0693130493164062 2 Oxidation (M) _LIDIAADWM(Oxidation (M))T_ ENSG00000109572|ENST00000513761|CLCN3;nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3 13.90604991867851 0.6142120002215601 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}{I|L}{I|L} 6 -1 37.95 0.0 0.0 3.2616 0.0 0.0 0.0 449.15174278072953 449.15174278072953 11.267959391884546 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.7059771852360797 0.4247425010840047 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}{I|L}{I|L} 3.2616 - 65 1 1.08 41080.1 1.0 12431 5750 18181 HBL1_DMSO_200M_050219_1,18183 HBL1_DMSO_200M_050219_1,18183,LIDIAADWMT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18184 86.993 8.9 5056400.0 25 0 634140.0 + 15716 IQYIPTELDQV 11 64 659.8480286687201 1317.68150440424 2 659.8487426638603 MULTI CID FTMS 0 0 0 18181 5438008.0 1.0 0 0.0 3 Unmodified _IQYIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 47.594388314883695 0.1309523012099263 3 [TP]E{I|L}DQV 7 4 35.115 0.0 0.0 2.6649 0.0 0.0 0.0 532.2768162541025 532.2768162541025 7.610374546349149 0.0 0.0 0.0 0 0.0 0.0 1.4436726795685342 0.0 + [TP]E{I|L}DQV 2.6649 + + 250 1 1.08 40015.4 1.0 12432 5750 18181 HBL1_DMSO_200M_050219_1,18184 HBL1_DMSO_200M_050219_1,18184,IQYIPTELDQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18185 86.994 16.0 3668400.0 25 0 600170.0 + 45751 YYISPRLTF 9 55 580.3107839781225 1158.6070150230448 2 580.3116943240166 MULTI CID FTMS 0 0 0 18181 2874537.0 0.6983598169735329 1 -0.0693130493164062 4 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 17.11289562659939 0.3734572693229295 3 YY{I|L}S 4 5 56.186 0.0 0.0 4.8494 0.0 0.0 0.0 629.342696110005 629.342696110005 44.59183145787911 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YY{I|L}S 4.8494 + + 33 + 1 1.08 50722.2 1.0 12433 5750 18181 HBL1_DMSO_200M_050219_1,18185 HBL1_DMSO_200M_050219_1,18185,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18186 86.995 18.0 3135500.0 25 0 540130.0 + 11563 GIYTGFIKV 9 79 499.28969435876377 996.5648357843276 2 499.2899658083916 MULTI CID FTMS 0 0 0 18181 2751207.25 0.4551893550960657 2 -0.1845474243164062 5 Unmodified _GIYTGFIKV_ ENSG00000153179|ENST00000542104|RASSF3 29.081581746732265 0.1611639662936252 3 {[VA]|[{I|L}G]}YTG{M(Oxidation (M))|F}{I|L}KV 9 0 + 65.283 0.0 0.0 6.5508 6.5508 60.786 0.0 0.0 0.0 27.147642715192504 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.2614393726401688 + + {[VA]|[{I|L}G]}YTG{M(Oxidation (M))|F}{I|L}KV;{[VA]|[{I|L}G]}YTG{M(Oxidation (M))|F}{I|L}VK 6.5508;6.5508 +;- + 102 + 1 1.08 50632.3 1.0 12434 5750 18181 HBL1_DMSO_200M_050219_1,18186 HBL1_DMSO_200M_050219_1,18186,GIYTGFIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18187 86.996 20.0 2307600.0 25 0 322820.0 + 14003 IAAWELSL 8 64 451.75254133747273 901.4905297417456 2 451.7528259158134 MULTI CID FTMS 0 0 0 18181 2744239.75 0.1176183167323411 19 -1.9142608642578125 6 Unmodified _IAAWELSL_ REV__ENST00000343827.7_2_15:57511726-57511765:+|nuORF 34.18733598223924 0.3315367612694167 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 -1 54.697 0.0 0.0 6.0674 0.0 0.0 0.0 199.1076204405776 199.1076204405776 35.75720713938118 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 6.0674 - 188 1 1.08 42998.2 1.0 12435 5750 18181 HBL1_DMSO_200M_050219_1,18187 HBL1_DMSO_200M_050219_1,18187,IAAWELSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18188 86.997 23.0 1011800.0 25 0 295050.0 7611 EIRDKATRRRL 11 38 471.952420540289 1412.835432221067 3 471.9522277712822 MULTI CID FTMS 0 0 0 18181 1606112.875 0.7849026210044435 1 -0.0693130493164062 7 Unmodified _EIRDKATRRRL_ ENSG00000141101|ENST00000268802|NOB1;ENST00000563055.1_1_16:69783239-69788596:-|nuORF 1.3295316138638542 0.8688751186870782 3 {I|L} 1 10 12.218 0.0 0.0 0.86482 0.0 0.0 1281.7406121300498 0.0 1281.7406121300498 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.86482 + + 4 + 1 1.08 32273.8 1.0 12436 5750 18181 HBL1_DMSO_200M_050219_1,18188 HBL1_DMSO_200M_050219_1,18188,EIRDKATRRRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18189 86.998 31.0 1303100.0 25 0 162740.0 + 13263 HILDFSPSL 9 65 514.7737993542977 1027.5330457753953 2 514.7758056521416 MULTI CID FTMS 0 0 0 18181 1024846.5 1.0 0 0.0 8 Unmodified _HILDFSPSL_ ENSG00000124702|ENST00000326974|KLHDC3 34.10243960390752 0.1078313939113124 3 [H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}S 6 3 37.152 0.0 0.0 3.6157 0.0 0.0 0.0 312.1554260144705 312.1554260144705 22.548181095651856 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.4247425010840047 0.0 + [H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}S 3.6157 + + 74 1 1.08 42192.6 1.0 12437 5750 18181 HBL1_DMSO_200M_050219_1,18189 HBL1_DMSO_200M_050219_1,18189,HILDFSPSL True True HILDFSPSL 86.998488 514.775805652142 8423640.0 18181.0 ENSG00000124702|ENST00000326974|KLHDC3 6.903644879659017 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18190 87.0 60.0 494060.0 25 0 70298.0 36217 SVYIYYFLS 9 57 577.7895671743997 1153.5645814155994 2 577.7898437380791 MULTI CID FTMS 0 0 0 18181 806018.875 1.0 0 0.0 9 Unmodified _SVYIYYFLS_ ENST00000359326.8_2_1:169798532-169798586:+|nuORF 11.640296217721598 0.521594087909532 3 VS{I|L} 3 7 23.104 0.0 0.0 2.0028 0.0 0.0 836.3704113489963 0.0 836.3704113489963 0.0 14.943415770716156 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 VS{I|L} 2.0028 - 60 + 1 1.08 30267.0 1.0 12438 5750 18181 HBL1_DMSO_200M_050219_1,18190 HBL1_DMSO_200M_050219_1,18190,SVYIYYFLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18191 87.002 78.0 762440.0 25 0 90564.0 + 15428 IPPPVIMV 8 72 433.2642702046081 864.5139874760163 2 433.2645446658134 MULTI CID FTMS 0 0 0 18181 743170.375 0.6586622030301708 4 -0.4046783447265625 10 Unmodified _IPPPVIMV_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 32.45364647766026 0.3613649037604678 3 [{I|L}P]VPP{I|L}MV 8 2 + 44.022 0.0 0.0 5.0921 5.0921 77.613 0.0 0.0 0.0 3.869446243705745 9.419628234359578 3.869446243705745 3.0102999566398125 0 0.6677353201839438 1.3979400086720375 0.0 0.0 [{I|L}P]VPP{I|L}MV;[{I|L}P]VP{I|L}PMV;[VP]PP{I|L}{I|L}MV;[{I|L}P]PVP{I|L}MV;[VP]{I|L}PP{I|L}MV;[VP]P{I|L}P{I|L}MV;[{I|L}P]PV{I|L}PMV;[VP]P{I|L}{I|L}PMV;[VP]{I|L}P{I|L}PMV;{[HG]|PP}VP{I|L}{I|L}MV 5.0921;4.7439;4.6445;4.6318;4.2963;4.2963;4.2836;3.9481;3.9481;3.7112 -;-;-;-;-;-;-;-;-;- 141 1 1.08 52911.6 1.0 12439 5750 18181 HBL1_DMSO_200M_050219_1,18191 HBL1_DMSO_200M_050219_1,18191,IPPPVIMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18192 87.003 46.0 990450.0 25 0 116850.0 -1 ATMLVLAVTV 10 72 517.3004782879307 1032.5864036426613 2 517.3057739138603 MULTI CID FTMS 0 0 0 18181 714719.0625 0.1739039924464369 -9 0.89373779296875 11 Oxidation (M) _ATM(Oxidation (M))LVLAVTV_ ENSG00000174125|ENST00000308979|TLR1;ENSG00000174130|ENST00000508254|TLR6 10.073929032068715 0.6785112666868882 3 [TA]YP 4 -1 31.427 0.0 0.0 3.0435 0.0 0.0 0.0 597.3725009201277 597.3725009201277 13.266062568876716 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [TA]YP 3.0435 - 49 + 1 1.08 40045.3 1.0 12440 5750 18181 HBL1_DMSO_200M_050219_1,18192 HBL1_DMSO_200M_050219_1,18192,ATMLVLAVTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18193 87.006 169.0 278650.0 25 0 102110.0 31719 RRRQRQRKMV 10 59 707.4241354494376 1412.833717965675 2 707.4250366091728 MULTI CID FTMS 0 0 0 18181 621366.875 0.6971834877414157 1 -0.0693130493164062 12 Unmodified _RRRQRQRKMV_ ENST00000558733.5_1_15:58947546-59041769:-|nuORF;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF 0.4583401331227399 0.7245164002484112 3 R 1 9 0.48455 0.0 0.0 0.034296 0.0 0.0 1130.6653657701656 123.04546533756093 1253.7108311077266 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.034296 + + 4 + 1 1.08 49206.9 1.0 12441 5750 18181 HBL1_DMSO_200M_050219_1,18193 HBL1_DMSO_200M_050219_1,18193,RRRQRQRKMV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18194 87.008 90.0 553460.0 25 0 70736.0 + 26362 TAYDNFVEL 9 84 536.2531675741451 1070.49178221509 2 536.2531616091728 MULTI CID FTMS 0 0 0 18181 596430.3125 0.9877955115471924 1 -0.0693130493164062 13 Unmodified _NSSYPYVEI_ ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 21.74664581756881 0.2544899275067181 3 [{I|L}T][C(Carbamidomethyl (C))C]S{M(Oxidation (M))|F}VE{I|L} 9 6 [{I|L}T][C(Carbamidomethyl (C))C]S{M(Oxidation (M))|F}V + + 19.068 12.515 1.5444 1.7812 1.7812 48.69 0.0 0.0 0.0 0.0 4.859856381998782 0.0 0.0 0 0.0 0.0 0.5 0.0 [{I|L}T][C(Carbamidomethyl (C))C]S{M(Oxidation (M))|F}VE{I|L} 1.7812 - 86 + 1 1.08 44771.7 1.0 12442 5750 18181 HBL1_DMSO_200M_050219_1,18194 HBL1_DMSO_200M_050219_1,18194,NSSYPYVEI False False TAYDNFVEL 87.008338 536.253161609173 6021244.5 18181.0 ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 2.5678488512833915 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18195 87.01 76.0 745670.0 25 0 92431.0 + 35100 SQVQQLISL 9 89 508.2930406295977 1014.5715283259956 2 508.2926818728447 MULTI CID FTMS 0 0 0 18181 478006.6875 0.2585320641191113 -3 0.2982940673828125 14 Unmodified _SQVQQLISL_ ENSG00000021776|ENST00000156471|AQR 24.99096001346401 0.2132109383330889 3 {[TV]|[{I|L}S]}AHVK[YN]V 9 8 K[YN]V + + 38.358 -3.6248 -0.71883 3.7807 3.7807 51.972 0.0 0.0 0.0 12.704109812304822 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.4634679910804405 0.0 {[TV]|[{I|L}S]}AHVK[YN]V 3.7807 - 688 1 1.08 47780.6 1.0 12443 5750 18181 HBL1_DMSO_200M_050219_1,18195 HBL1_DMSO_200M_050219_1,18195,SQVQQLISL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18196 87.015 278.0 448710.0 25 0 70106.0 12622 GVKLKKVQERQ 11 115 438.2743433902932 1311.8012007710795 3 438.2746765017509 MULTI CID FTMS 0 0 0 18181 438993.8125 0.6281490394031355 -3 0.2982940673828125 15 Unmodified _GVKLKKVQERQ_ ENSG00000134278|ENST00000409402|SPIRE1;nc|ENSG00000134278|Q08AE8-2|SPIRE1;nc|ENSG00000134278|Q08AE8-3|SPIRE1;nc|ENSG00000134278|Q08AE8-4|SPIRE1;nc|ENSG00000134278|Q08AE8-5|SPIRE1 12.240655878213236 0.7805268987462184 3 [VG]{M(Oxidation (M))|F}[KC]{I|L}{I|L} 7 8 43.517 0.0 0.0 3.3173 0.0 0.0 0.0 548.3288668268186 548.3288668268186 15.563025007672875 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.7614393726401688 [VG]{M(Oxidation (M))|F}[KC]{I|L}{I|L} 3.3173 - 369 + 1 1.08 101508.8 1.0 12444 5750 18181 HBL1_DMSO_200M_050219_1,18196 HBL1_DMSO_200M_050219_1,18196,GVKLKKVQERQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18197 87.018 117.0 223850.0 25 0 23252.0 42723 VVCPLYISA 9 65 482.7602208482151 963.50588876323 2 482.7608825564384 MULTI CID FTMS 0 0 0 18181 441417.28125 0.3247549810766265 8 -0.7950515747070312 16 Unmodified _VVCPLYISA_ ENSG00000065802|ENST00000264607|ASB1 8.593279151180031 0.6146971463335029 3 A 1 8 10.596 0.0 0.0 1.0997 0.0 0.0 874.4576003494591 0.0 874.4576003494591 0.0 -2.0801303631742663 -2.0801303631742663 0.0 0 0.0 0.0 0.0 0.0 + A 1.0997 + + 12 + 1 1.08 27357.5 1.0 12445 5750 18181 HBL1_DMSO_200M_050219_1,18197 HBL1_DMSO_200M_050219_1,18197,VVCPLYISA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18198 87.028 621.0 483840.0 25 0 53418.0 + 34820 SQFPGAITL 9 215 467.2553476162436 932.4961422992872 2 467.2550842165947 MULTI CID FTMS 0 0 0 18181 350811.4375 0.672029791136148 -6 0.5382843017578125 17 Unmodified _SQFPGAITL_ ENST00000263083.10_1_17:1944800-1946395:+|nuORF;ENST00000571710.5_1_17:1945525-1946395:+|nuORF;nc|ENSG00000262664|Q8WZ82|OVCA2 60.07390631473393 0.0260411565414776 3 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L} 8 2 + 46.273 0.0 0.0 4.9623 4.9623 77.547 0.0 0.0 0.0 9.921745591758947 10.172203223519531 9.921745591758947 3.064250275506872 0 1.1989700043360187 0.6020599913279624 0.8778623208748889 0.7600012904178959 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}[PG]A{I|L}T{I|L};{[QS]|[NT]}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[QP]{I|L}T{I|L};[QP]{M(Oxidation (M))|F}{[QS]|[NT]}{I|L}T{I|L};[QP]{I|L}T{M(Oxidation (M))|F}NT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[PG]A{I|L}T{I|L};{[SA]|[TG]}G{M(Oxidation (M))|F}[QP]{I|L}T{I|L};[QP]S{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T{I|L};[QP]{M(Oxidation (M))|F}[SG]A{I|L}T{I|L} 4.9623;4.6337;4.1439;3.8983;3.6921;3.6365;3.5697;3.527;3.4028;3.3635 -;+;-;-;-;-;-;-;-;- + 1719 1 1.08 228555.3 1.0 12446 5750 18181 HBL1_DMSO_200M_050219_1,18198 HBL1_DMSO_200M_050219_1,18198,SQFPGAITL True True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 18199 87.04 689.0 482900.0 25 0 97068.0 -1 0 159 399.7233862909069 797.4322196486138 2 399.7233459353447 MULTI CID FTMS 0 0 0 18181 326387.46875 0.3375336963330129 -3 0.2982940673828125 18 3 {[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}{I|L}K 6 -1 + 57.757 0.0 0.0 7.2429 7.2429 81.038 0.0 0.0 0.0 20.705911455403893 0.9691001300805624 0.9691001300805624 0.9691001300805624 0 0.8494850021680094 2.0 0.0 0.2887254899964357 {[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}{I|L}K;{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}K{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{M(Oxidation (M))|F}{I|L}K;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{M(Oxidation (M))|F}K{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}[K{I|L}]{M(Oxidation (M))|F};[K{I|L}]{M(Oxidation (M))|F}{I|L}{[YD]|[{M(Oxidation (M))|F}M]} 7.2429;7.1214;5.4834;5.3619;2.6622;0.71308 -;-;-;-;-;- 101 + 1 1.08 256722.1 1.0 12447 5750 18181 HBL1_DMSO_200M_050219_1,18199 HBL1_DMSO_200M_050219_1,18199, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18200 87.05 543.0 195650.0 25 0 27459.0 + 17157 KLIGDPNLEFV 11 126 622.8482798417656 1243.682006750331 2 622.8477661013603 MULTI CID FTMS 0 0 0 18181 306931.375 0.5015567873497725 2 -0.1845474243164062 19 Unmodified _KLIGDPNLEFV_ ENSG00000132341|ENST00000543796|RAN;ENST00000444720.1_1_13:21321226-21321529:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 40.72490554402381 0.2012291192650359 3 [{I|L}T]S[KP][NP]{I|L}E{M(Oxidation (M))|F}V 11 4 + 60.837 0.0 0.0 4.8917 4.8917 76.927 0.0 0.0 0.0 3.833498159257786 16.575773191777927 3.833498159257786 3.0102999566398125 0 1.1989700043360187 1.3010299956639813 1.0629529932484498 0.6747425010840047 [{I|L}T]S[KP][NP]{I|L}E{M(Oxidation (M))|F}V;[{I|L}T]S[KP][NP]E{I|L}{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[RK][NP]{I|L}E{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}T[KP][NP]{I|L}E{M(Oxidation (M))|F}V;[NP]{I|L}E[RK]{I|L}E{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[RK][NP]E{I|L}{M(Oxidation (M))|F}V;[{I|L}T]S[KP][PA]RE{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}T[KP][NP]E{I|L}{M(Oxidation (M))|F}V;[NP]{I|L}E[RK]E{I|L}{M(Oxidation (M))|F}V;[{I|L}P]NE[RK]{I|L}E{M(Oxidation (M))|F}V 4.8917;4.6496;4.5834;4.4164;4.3414;4.3414;4.1927;4.1744;4.0994;4.0873 -;-;-;-;-;-;-;-;-;- 1933 1 1.08 84341.4 1.0 12448 5750 18181 HBL1_DMSO_200M_050219_1,18200 HBL1_DMSO_200M_050219_1,18200,KLIGDPNLEFV False True KLIGDPNLEFV 87.05 622.84776610136 12223531.0 18181.0 ENST00000455094.1_1_6:30454046-30454364:+|nuORF;;ENST00000444720.1_1_13:21321226-21321529:-|nuORF;;ENSG00000132341|ENST00000543796|RAN 5.751274903615316 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18201 87.055 278.0 315760.0 25 0 34256.0 + 2908 AVFPHLTVV 9 129 491.7899853969666 981.5654178607332 2 491.7902709841728 MULTI CID FTMS 0 0 0 18181 269982.0 0.2789363988421043 3 -0.2706222534179687 20 Unmodified _AVFPHLTVV_ ENSG00000134825|ENST00000537328|TMEM258 44.40701690623563 0.0526327925666318 3 [H{I|L}]P{M(Oxidation (M))|F}TVAVV 9 7 + 61.678 0.0 0.0 6.2836 6.2836 82.591 0.0 0.0 0.0 15.228787452803374 5.642492736872597 5.642492736872597 3.534087492996392 0 0.3054621874040891 1.2218487496163564 1.2302046884880935 0.0 [H{I|L}]P{M(Oxidation (M))|F}TVAVV;[H{I|L}]PT{M(Oxidation (M))|F}VAVV;[H{I|L}]TP{M(Oxidation (M))|F}VAVV;[H{I|L}]PTV{M(Oxidation (M))|F}AVV;[H{I|L}]M{I|L}TVAVV;[H{I|L}]TPV{M(Oxidation (M))|F}AVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}TVAVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}T{M(Oxidation (M))|F}VAVV;[{I|L}P]H{M(Oxidation (M))|F}TVAVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{I|L}TVAVV 6.2836;5.9236;5.7487;5.4954;5.4909;5.3205;4.7321;4.3721;4.2766;4.23 -;-;-;-;-;-;-;-;-;- 710 1 1.08 70667.5 1.0 12449 5750 18181 HBL1_DMSO_200M_050219_1,18201 HBL1_DMSO_200M_050219_1,18201,AVFPHLTVV True True AVFPHLTVV 87.055112 491.790270984173 16625683.0 18181.0 ENSG00000134825|ENST00000537328|TMEM258 4.633862574895223 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18203 87.06 96.0 683330.0 25 0 75443.0 + 30026 QTPEFFQDV 9 97 555.7584846907921 1109.502416448384 2 555.7591430544853 MULTI CID FTMS 0 0 0 18202 459355.5 0.1791607025152792 4 -0.3914413452148437 1 Unmodified _QTPEFFQDV_ ENSG00000169710|ENST00000306749|FASN 53.832793166522166 0.0319663582346103 3 [EP]TQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}T 7 7 45.767 0.0 0.0 4.125 0.0 0.0 0.0 256.0736194115279 256.0736194115279 15.558801728398564 0.0 0.0 0.0 0 0.2742275032520141 1.2218487496163564 1.7302046884880935 0.5 [EP]TQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}T 4.125 - 875 1 1.08 55223.4 1.0 12450 5751 18202 HBL1_DMSO_200M_050219_1,18203 HBL1_DMSO_200M_050219_1,18203,QTPEFFQDV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18204 87.061 39.0 1442600.0 25 0 96041.0 + + 36591 MVLDNIPKL 9 82 521.7861965596289 1041.5578401860578 2 521.7870361208916 MULTI CID FTMS 0 0 0 18202 713853.0 0.7665367343951579 2 -0.2013092041015625 2 Unmodified _TALYIWYL_ ENSG00000164961|ENST00000318410|WASHC5 15.768221252438446 0.6779680726941459 3 [TA]{I|L}{M(Oxidation (M))|F} 4 -1 33.232 0.0 0.0 3.1906 0.0 0.0 0.0 606.3120821588499 606.3120821588499 19.12917210618758 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 [TA]{I|L}{M(Oxidation (M))|F} 3.1906 - 53 + 1 1.08 50590.0 1.0 12451 5751 18202 HBL1_DMSO_200M_050219_1,18204 HBL1_DMSO_200M_050219_1,18204,TALYIWYL False False MVLDNIPKL 87.060735 521.787036120892 2384868.25 18202.0 ENSG00000164961|ENST00000318410|WASHC5 2.757417678833008 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18205 87.062 23.0 2303600.0 25 0 162710.0 -1 0 80 494.3085186139824 493.3012421473824 1 494.3080627322197 MULTI CID FTMS 0 0 0 18202 1246730.25 0.0369598236572706 -3 0.2907180786132812 3 3 [VS]{I|L}K 4 -1 24.437 0.0 0.0 4.9538 0.0 0.0 0.0 62.9986963312293 62.9986963312293 6.249387366082999 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]{I|L}K 4.9538 - 100 1 1.08 46169.1 1.0 12452 5751 18202 HBL1_DMSO_200M_050219_1,18205 HBL1_DMSO_200M_050219_1,18205, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18206 87.063 31.0 2255100.0 25 0 202560.0 + 12920 NMIVDLDNV 9 95 516.7598526758622 1031.5051524185244 2 516.7560302615166 MULTI CID FTMS 0 0 0 18202 1191313.75 0.5335289613469155 4 -0.3914413452148437 4 Unmodified _GYPEVALHF_ ENST00000409258.2_1_2:86386442-86398424:-|nuORF;nc|ENSG00000132305|Q16891-3|IMMT;ENST00000490238.5_1_2:86385703-86389088:-|nuORF;nc|ENSG00000132305|Q16891-4|IMMT;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENSG00000132305|ENST00000410111|IMMT;nc|ENSG00000132305|Q16891-2|IMMT 12.240655878213236 0.5053430591993562 3 [MN]{I|L}VKEP{[DS]|[MA]|[CV]|TT} 9 9 + 47.772 0.0 0.0 4.6312 4.6312 74.049 0.0 0.0 0.0 8.720291597552809 7.147642715192504 7.147642715192504 1.7609125905568137 0 0.0 1.3979400086720375 0.0 0.5709991640913001 [MN]{I|L}VKEP{[DS]|[MA]|[CV]|TT};[MN]{I|L}KVEP{[DS]|[MA]|[CV]|TT};[TA]WVKEP{[DS]|[MA]|[CV]|TT};[MN]{I|L}D[K{I|L}]P{[DS]|[MA]|[CV]|TT};[TA]WKVEP{[DS]|[MA]|[CV]|TT};[TA]WD[K{I|L}]P{[DS]|[MA]|[CV]|TT};[YG]PEV[{I|L}A]{[{M(Oxidation (M))|F}H]|[RQ]};{NN|[MP]|[D{I|L}]|[EV]}VD{I|L}QQ{[DS]|[MA]|[CV]|TT};{NN|[MP]|[D{I|L}]|[EV]}DDKKP{[DS]|[MA]|[CV]|TT};[YG]QQ{I|L}[NP]NV 4.6312;4.4605;3.7858;3.689;3.6151;2.8436;1.9952;1.4116;1.2408;1.2349 -;-;-;-;-;-;+;-;-;- + 272 1 1.08 62633.8 1.0 12453 5751 18202 HBL1_DMSO_200M_050219_1,18206 HBL1_DMSO_200M_050219_1,18206,GYPEVALHF False True NMIVDLDNV 87.063091 516.756030261517 12806505.0 18202.0 ENST00000409258.2_1_2:86386442-86398424:-|nuORF;;nc|ENSG00000132305|Q16891-3|IMMT;;ENST00000490238.5_1_2:86385703-86389088:-|nuORF;;nc|ENSG00000132305|Q16891-4|IMMT;;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;;ENSG00000132305|ENST00000410111|IMMT;;nc|ENSG00000132305|Q16891-2|IMMT 5.328267256418864 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18207 87.065 76.0 1771400.0 25 0 424770.0 + 10988 GARNKGGG 8 82 716.3822837030906 715.3750072364905 1 716.3837158083916 MULTI CID FTMS 0 0 0 18202 1046357.375 0.1773705482547978 -2 0.1945343017578125 5 Unmodified _GARNKGGG_ REV__ENST00000374941.8_2_X:55744554-55744722:+|nuORF 0.7936320650641473 0.8195151834710337 3 DD{I|L}{I|L}Q{I|L} 6 -1 + 64.522 0.0 0.0 9.0193 9.0193 88.484 0.0 0.0 0.0 3.606156856482258 16.197887582883936 3.606156856482258 3.606156856482258 0 1.089136830878453 0.7695510786217261 0.9291746928241126 0.4247425010840047 DD{I|L}{I|L}Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}Q{I|L};DD{I|L}Q{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}DQ{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}[AG]{I|L};DD{I|L}{I|L}[AG]{I|L};DDQ{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[AG]{I|L}{I|L};[Q{I|L}]DD{I|L}{I|L};{I|L}{I|L}DDQ{I|L} 9.0193;8.5152;8.3979;7.8938;7.1984;7.1088;6.7656;6.577;6.2361;6.1641 -;-;-;-;-;-;-;-;-;- 215 1 1.08 106860.0 1.0 12454 5751 18202 HBL1_DMSO_200M_050219_1,18207 HBL1_DMSO_200M_050219_1,18207,GARNKGGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18208 87.067 87.0 775900.0 25 0 77972.0 + 31507 RQFSTPFQL 9 90 562.2985918194016 1122.5826307056032 2 562.2991210818291 MULTI CID FTMS 0 0 0 18202 555185.5625 0.994507963704531 1 -0.115234375 6 Unmodified _RQFSTPFQL_ ENSG00000143442|ENST00000271715|POGZ;nc|ENSG00000143442|Q7Z3K3-2|POGZ;nc|ENSG00000143442|Q7Z3K3-3|POGZ;nc|ENSG00000143442|Q7Z3K3-5|POGZ;nc|ENSG00000143442|Q7Z3K3-6|POGZ;nc|ENSG00000143442|Q7Z3K3-7|POGZ 38.17557092003332 0.0854718145212029 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RST{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L} 9 2 + 38.364 0.0 0.0 3.4174 3.4174 67.919 0.0 0.0 0.0 0.1548564655519868 7.741049764686146 0.1548564655519868 0.1548564655519868 0 0.8252574989159953 0.0 0.4247425010840047 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RST{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[QT][YV]Q{I|L};[YV]QQT{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TS[TA]Q{I|L};[Q{I|L}][YN]T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L};{[TV]|[{I|L}S]}[KC]ST{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RST{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[AG]{I|L};[Q{I|L}]M[QT][YV]Q{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[QT][YV]Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TS{[DA]|[EG]}KV 3.4174;3.4037;2.8356;2.6619;2.6379;2.6379;2.5972;2.3152;1.6926;1.3996 -;-;-;-;-;-;-;-;-;- 419 1 1.08 59533.6 1.0 12455 5751 18202 HBL1_DMSO_200M_050219_1,18208 HBL1_DMSO_200M_050219_1,18208,RQFSTPFQL True True RQFSTPFQL 87.066808 562.299121081829 11198810.0 18202.0 nc|ENSG00000143442|Q7Z3K3-6|POGZ;;nc|ENSG00000143442|Q7Z3K3-3|POGZ;;nc|ENSG00000143442|Q7Z3K3-5|POGZ;;nc|ENSG00000143442|Q7Z3K3-2|POGZ;;nc|ENSG00000143442|Q7Z3K3-7|POGZ;;ENSG00000143442|ENST00000271715|POGZ 5.329981803894043 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18209 87.071 241.0 281000.0 25 0 24603.0 + 8049 ENNTEEESPSL 11 104 624.7645521423699 1247.5145513515397 2 624.7643310427666 MULTI CID FTMS 0 0 0 18202 394978.15625 1.0 0 0.0 7 Unmodified _ENNTEEESPSL_ REV__ENSG00000188050|ENST00000340112|RNF133 15.248480904072842 0.7179608125786238 3 {I|L}S 2 -1 39.481 0.0 0.0 3.1648 0.0 0.0 0.0 1044.3748018885217 1044.3748018885217 19.646545856631224 0.0 0.0 0.0 0 0.3807196863200844 1.0457574905606752 0.4247425010840047 0.0 {I|L}S 3.1648 - 197 + 1 1.08 56805.0 1.0 12456 5751 18202 HBL1_DMSO_200M_050219_1,18209 HBL1_DMSO_200M_050219_1,18209,ENNTEEESPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18210 87.073 62.0 852190.0 25 0 125920.0 + 38948 TVMVDTEGSL 10 95 526.2531113005055 1050.4916696678108 2 526.2509033083916 MULTI CID FTMS 0 0 0 18202 353447.625 0.7252972190554169 1 -0.115234375 8 Unmodified _TVMVDTEGSL_ REV__ENSG00000197410|ENST00000357232|DCHS2 10.073929032068715 0.6785112666868882 3 RVEDCV 6 -1 20.355 0.0 0.0 1.9376 0.0 0.0 331.1581258219108 0.0 331.1581258219108 0.0 5.750481569446755 0.0 0.0 0 0.0 0.0 0.0 0.0 RVEDCV 1.9376 - 123 + 1 1.08 46023.2 1.0 12457 5751 18202 HBL1_DMSO_200M_050219_1,18210 HBL1_DMSO_200M_050219_1,18210,TVMVDTEGSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18211 87.076 132.0 514450.0 25 0 52397.0 + + 26250 NQLDGIHLL 9 108 511.7837673353448 1021.5529817374896 2 511.7853881716728 MULTI CID FTMS 0 0 0 18202 316464.5 0.0859671420630557 -8 0.766571044921875 9 Unmodified _NQLDVALHL_ ENSG00000165819|ENST00000298717|METTL3 36.04419817259434 0.0971720506436186 3 {[QN]|[E{I|L}]|[KN]}{I|L}D{[VA]|[{I|L}G]}H{I|L}{I|L} 9 -1 + 29.527 0.0 0.0 2.8904 2.8904 77.511 0.0 0.0 0.0 4.829213625829453 0.3580856082708123 0.3580856082708123 8.634228874477067 0 0.8252574989159953 0.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}D{[VA]|[{I|L}G]}H{I|L}{I|L};[VP]N[K{I|L}]D{I|L}[HS];GG[VP][K{I|L}]D{I|L}[HS];[VP][KG]{[VA]|[{I|L}G]}D{I|L}[HS];[VP]GG[K{I|L}]D{I|L}[HS] 2.8904;2.0452;1.8699;1.7595;0.82541 -;-;-;-;- 320 + 1 1.08 54953.8 1.0 12458 5751 18202 HBL1_DMSO_200M_050219_1,18211 HBL1_DMSO_200M_050219_1,18211,NQLDVALHL False False NQLDGIHLL 87.075562 511.785388171673 35408456.0 18202.0 ENSG00000165819|ENST00000298717|METTL3 5.316770871480306 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18212 87.08 248.0 491840.0 25 0 38145.0 + 30268 QYMERLQLL 9 132 597.3206915339773 1192.6268301347543 2 597.3205444216728 MULTI CID FTMS 0 0 0 18202 284633.25 1.0 0 0.0 10 Unmodified _QYMERLQLL_ ENSG00000173171|ENST00000368376|MTX1;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;ENST00000495492.1_1_1:155182265-155182385:+|nuORF;ENST00000495589.5_1_1:155181271-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;nc|ENSG00000173171|Q13505-3|MTX1 134.295615338601 0.0119261337544952 3 [AG]{I|L}REMYQ{I|L}{I|L} 10 6 + 53.99 0.0 0.0 4.527 4.527 80.507 0.0 0.0 0.0 7.020082085180952 7.90107887116293 7.020082085180952 7.020082085180952 0 1.055462187404089 1.154901959985743 1.1861818737241734 1.1307196863200843 [AG]{I|L}REMYQ{I|L}{I|L};[Q{I|L}]REMYQ{I|L}{I|L};[AG]{I|L}REMY[AG]{I|L}{I|L};[AG]{I|L}{I|L}[DG]MYQ{I|L}{I|L};[Q{I|L}]{I|L}[DG]MYQ{I|L}{I|L};[Q{I|L}]REMY[AG]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}CRRYQ{I|L}{I|L};[Q{I|L}]{I|L}[DG]MY[AG]{I|L}{I|L};[AG]{I|L}{I|L}[DG]MY[AG]{I|L}{I|L};[AG]{I|L}REM{I|L}[YQ]{I|L} 4.527;3.9383;3.7585;3.5071;3.271;3.1662;2.5802;2.5026;2.1498;1.8923 -;-;-;-;-;-;-;-;-;- 988 1 1.08 93371.1 1.0 12459 5751 18202 HBL1_DMSO_200M_050219_1,18212 HBL1_DMSO_200M_050219_1,18212,QYMERLQLL True True QYMERLQLL 87.080185 597.320544421673 2680218.75 18202.0 ENST00000495492.1_1_1:155182265-155182385:+|nuORF;;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;;nc|ENSG00000173171|Q13505-3|MTX1;;ENSG00000173171|ENST00000368376|MTX1;;ENST00000495589.5_1_1:155181271-155183486:+|nuORF;;nc|ENSG00000173171|Q13505-2|MTX1 5.631521383921306 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18213 87.083 160.0 565380.0 25 0 54963.0 + 42061 VQVLRRDSL 9 117 543.3267709483335 1084.638988963467 2 543.3273803591728 MULTI CID FTMS 0 0 0 18202 276842.96875 0.1720187984320012 4 -0.3914413452148437 11 Unmodified _VQVLRRDSL_ ENST00000379066.5_1_2:37543393-37543606:-|nuORF 52.268347100219714 0.0353964759249114 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}G{I|L}D 9 6 59.561 0.0 0.0 5.4913 0.0 0.0 0.0 82.06687341861561 82.06687341861561 45.58168522831444 0.0 0.0 0.0 0 1.25 2.0 1.5044321917401078 0.7614393726401688 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}G{I|L}D 5.4913 - 702 + 1 1.08 75873.2 1.0 12460 5751 18202 HBL1_DMSO_200M_050219_1,18213 HBL1_DMSO_200M_050219_1,18213,VQVLRRDSL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18214 87.089 317.0 642750.0 25 0 79254.0 1900 ALYSDRSI 8 124 462.7439258842263 923.4732988352524 2 462.7441589236259 MULTI CID FTMS 0 0 0 18202 261441.0625 0.1484500506987455 29 -2.985870361328125 12 Unmodified _ALYSDRSI_ ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5 23.1484247019978 0.5573009939494978 3 [{I|L}A]NY{M(Oxidation (M))|F}PS{I|L} 8 4 [{I|L}A] + + 33.81 22.843 12.407 3.6612 3.6612 51.644 0.0 0.0 0.0 0.0 23.620389711443565 0.0 0.0 0 0.8807196863200843 0.0 0.2887254899964357 0.0 [{I|L}A]NY{M(Oxidation (M))|F}PS{I|L} 3.6612 - 538 + 1 1.08 158903.0 1.0 12461 5751 18202 HBL1_DMSO_200M_050219_1,18214 HBL1_DMSO_200M_050219_1,18214,ALYSDRSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18215 87.1 635.0 145430.0 25 0 5656.8 -1 LQYLCSPWMLS 11 141 678.8223524857718 1355.6301520383436 2 678.8227416872978 MULTI CID FTMS 0 0 0 18202 251383.078125 1.0 0 0.0 13 Oxidation (M) _LQYLCSPWM(Oxidation (M))LS_ ENST00000569658.1_1_16:69833295-69833346:+|nuORF 20.41453444215458 0.6105011870913812 3 VAAY{I|L} 5 -1 23.015 0.0 0.0 1.6978 0.0 0.0 0.0 835.3271254696002 835.3271254696002 8.510766930661385 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 VAAY{I|L} 1.6978 - 417 + 1 1.08 76371.8 1.0 12462 5751 18202 HBL1_DMSO_200M_050219_1,18215 HBL1_DMSO_200M_050219_1,18215,LQYLCSPWMLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18216 87.111 627.0 197090.0 25 0 15485.0 -1 0 141 1030.1650534537205 3087.4733309613616 3 1030.167773425579 MULTI CID FTMS 0 0 0 18202 212819.9375 0.081720342936014 6 -0.5905990600585938 14 3 [{M(Oxidation (M))|F}V]MV{I|L}[EP]V 8 -1 28.249 0.0 0.0 0.91496 0.0 0.0 0.0 2169.989463637 2169.989463637 5.573193899842437 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 [{M(Oxidation (M))|F}V]MV{I|L}[EP]V 0.91496 - 11694 + 1 1.08 85373.9 1.0 12463 5751 18202 HBL1_DMSO_200M_050219_1,18216 HBL1_DMSO_200M_050219_1,18216, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18217 87.118 403.0 546600.0 25 0 74207.0 22894 LSCWQKDL 8 180 496.74796322575565 991.4813735183112 2 496.7477599978447 MULTI CID FTMS 0 0 0 18202 166772.6875 0.975134172341385 -1 0.0693130493164062 15 Unmodified _LSCWQKDL_ ENST00000471816.1_1_1:160766002-160783471:+|nuORF 28.486842064014134 0.4448922141344407 3 {[TV]|[{I|L}S]}{I|L}D[YG]PD{I|L} 9 5 + 58.612 0.0 0.0 5.9116 5.9116 77.553 0.0 0.0 0.0 24.58744750429966 1.249387366082999 1.249387366082999 1.249387366082999 0 1.0356668758921828 2.0 1.7249073637206092 0.0 {[TV]|[{I|L}S]}{I|L}D[YG]PD{I|L};{[TV]|[{I|L}S]}{I|L}D[YG]PEV;{[TV]|[{I|L}S]}{I|L}D[WM]D{I|L};{[TV]|[{I|L}S]}{I|L}D[YG]VEP;{[TV]|[{I|L}S]}{I|L}D[WM]EV;{[TV]|[{I|L}S]}[DG][Y{I|L}]PD{I|L};{[TV]|[{I|L}S]}[DG][Y{I|L}]PEV;{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V]{[DS]|[MA]|[CV]|TT}PD{I|L};{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V]{[DS]|[MA]|[CV]|TT}PEV;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}[YG]PD{I|L} 5.9116;5.7856;4.698;4.576;4.5719;4.1295;4.0035;3.8855;3.7594;3.4317 -;-;-;-;-;-;-;-;-;- 1650 + 1 1.08 166484.8 1.0 12464 5751 18202 HBL1_DMSO_200M_050219_1,18217 HBL1_DMSO_200M_050219_1,18217,LSCWQKDL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18218 87.131 742.0 305200.0 25 0 22568.0 -1 0 147 643.4032918265171 642.3960153599171 1 643.4028198122978 MULTI CID FTMS 0 0 0 18202 162987.8125 0.1743220584161603 4 -0.3914413452148437 16 3 {NN|[MP]|[D{I|L}]|[EV]}AV{I|L}{I|L} 6 -1 + 50.169 0.0 0.0 7.8097 7.8097 81.999 0.0 0.0 0.0 2.218487496163561 6.333635724177064 2.218487496163561 0.7082530717588753 0 0.555462187404089 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}AV{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{I|L}{I|L}{I|L};{I|L}{I|L}DG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}V{I|L};{I|L}{I|L}DAV{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}{I|L}V;{I|L}{I|L}VDA{I|L};{I|L}{I|L}DA{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}VA{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GV{I|L}{I|L} 7.8097;7.6994;7.4643;7.3249;6.9796;6.8237;6.6065;6.4784;6.3242;6.3242 -;-;-;-;-;-;-;-;-;- 472 1 1.08 169629.5 1.0 12465 5751 18202 HBL1_DMSO_200M_050219_1,18218 HBL1_DMSO_200M_050219_1,18218, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18219 87.139 355.0 255560.0 25 0 28993.0 + 19289 LEKRVKKSL 9 132 550.8599715248948 0 551.3001586794853 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _LEKRVKKSL_ REV__ENSG00000167721|ENST00000301364|TSR1 12.531546534597751 0.2832320739326029 3 N{I|L}{I|L}{[CP]|[EA]}QD 7 -1 21.969 0.0 0.0 1.9977 0.0 0.0 231.2615557433458 82.06687341861561 313.3284291619614 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 N{I|L}{I|L}{[CP]|[EA]}QD 1.9977 - 335 + 1 1.08 76496.8 1.0 12466 5751 18202 HBL1_DMSO_200M_050219_1,18219 HBL1_DMSO_200M_050219_1,18219,LEKRVKKSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18220 87.153 800.0 308990.0 25 0 22647.0 41109 VNNCVCHFSPL 11 205 616.7815217157214 0 616.7814208865166 PEAK CID FTMS 0 0 0 18202 157751.453125 1.0 0 0.0 18 Unmodified _VNNCVCHFSPL_ ENSG00000170515|ENST00000303305|PA2G4;ENST00000418595.1_1_6:112938557-112938875:-|nuORF;ENST00000438325.2_1_9:92064608-92065217:+|nuORF;ENST00000473864.1_1_3:156528118-156528448:-|nuORF;ENST00000550166.1_1_12:56500490-56500880:+|nuORF;nc|ENSG00000170515|Q9UQ80-2|PA2G4 26.268140514670165 0.2743391275734092 3 SP{M(Oxidation (M))|F} 3 9 24.943 0.0 0.0 2.0254 0.0 0.0 131.09498793769689 766.2785069379489 897.3734948756457 0.0 0.0 0.0 0.0 0 1.5 0.0 0.6237125054200234 0.0 SP{M(Oxidation (M))|F} 2.0254 - 756 1 1.08 179068.5 0.8899999856948853 12467 5751 18202 HBL1_DMSO_200M_050219_1,18220 HBL1_DMSO_200M_050219_1,18220,VNNCVCHFSPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18221 87.167 800.0 233000.0 25 0 7738.7 -1 0 153 888.9126902427956 1775.8108275523912 2 889.4133788943291 MULTI CID FTMS 0 0 0 18202 165782.078125 1.0 0 0.0 19 3 [KT]EY{M(Oxidation (M))|F}AQEQA[CS]VC(Carbamidomethyl (C)){I|L} 15 -1 + 86.052 0.0 0.0 4.8458 4.8458 75.101 0.0 0.0 0.0 61.86555288494988 14.304461535987455 14.304461535987455 1.9255808323235613 0 0.2396518287104437 0.0 0.0 1.4604093769761874 [KT]EY{M(Oxidation (M))|F}AQEQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AQEAGA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AQEQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AEQAGA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AEQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AQEAGA[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AQEAQ[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AEQAGA[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AEQQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}A[AG]EQA[CS]VC(Carbamidomethyl (C)){I|L} 4.8458;4.7373;4.6763;4.6382;4.5994;4.5678;4.5067;4.4687;4.4299;4.3372 -;-;-;-;-;-;-;-;-;- 10697 + 1 1.08 122627.5 0.949999988079071 12468 5751 18202 HBL1_DMSO_200M_050219_1,18221 HBL1_DMSO_200M_050219_1,18221, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18222 87.17 119.0 646090.0 25 0 157570.0 -1 CLTCFLLMF 9 90 402.18993470148894 1203.5479747046668 3 402.1903259158134 MULTI CID FTMS 0 0 0 18202 144840.65625 1.0 0 0.0 20 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))LTC(Carbamidomethyl (C))FLLMF_ ENST00000566239.1_1_15:65822954-65844187:+|nuORF 5.296884461304476 0.7297726132274777 3 {M(Oxidation (M))|F} 1 -1 15.485 0.0 0.0 1.2866 0.0 0.0 1038.4687033197042 0.0 1038.4687033197042 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2866 + + 60 + 1 1.08 65390.5 1.0 12469 5751 18202 HBL1_DMSO_200M_050219_1,18222 HBL1_DMSO_200M_050219_1,18222,CLTCFLLMF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18224 87.175 12.0 6245400.0 25 0 461700.0 + 22258 LPRLTPPVL 9 79 503.326445046479 1004.638337159758 2 503.3264343142509 MULTI CID FTMS 0 0 0 18223 1393296.5 0.04833683807802 5 -0.4753646850585937 1 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 58.6788170122104 0.0268135626297836 3 [{I|L}P]RT{I|L}PPV{I|L} 9 2 + 80.416 0.0 0.0 8.0045 8.0045 90.733 0.0 0.0 0.0 20.50280141473493 64.93169394953696 20.50280141473493 6.938200260161125 0 0.805462187404089 1.6989700043360187 1.1549471895720984 0.0 [{I|L}P]RT{I|L}PPV{I|L};[{I|L}P][{I|L}T]RPPV{I|L};[{I|L}P]RTP{I|L}PV{I|L};[{I|L}P]RTPP{I|L}V{I|L};[VP][KQ]KPPV{I|L};[{I|L}P]R[VP]P[{I|L}T]{I|L};[{I|L}P]R[RH]AKK 8.0045;7.3139;6.684;5.4017;4.5879;2.3203;1.6755 -;-;-;-;-;-;- 382 1 1.096 62224.9 1.0 12470 5752 18223 HBL1_DMSO_200M_050219_1,18224 HBL1_DMSO_200M_050219_1,18224,LPRLTPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18225 87.176 16.0 3498600.0 25 0 687940.0 + 13207 HGLTVPLI 8 73 425.2631560955295 848.511759257859 2 425.2633544802666 MULTI CID FTMS 0 0 0 18223 1390145.75 0.3615807067238312 1 -0.0860748291015625 2 Unmodified _HGLTVPLI_ ENSG00000113732|ENST00000519374|ATP6V0E1 45.7499826716795 0.1592378023510922 3 {[HG]|PP}{I|L}TV 5 3 24.922 0.0 0.0 2.9371 0.0 0.0 0.0 338.20818741776395 338.20818741776395 9.436974992327125 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9247425010840048 0.0 + {[HG]|PP}{I|L}TV 2.9371 + + 48 1 1.096 49662.8 1.0 12471 5752 18223 HBL1_DMSO_200M_050219_1,18225 HBL1_DMSO_200M_050219_1,18225,HGLTVPLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18226 87.177 9.6 4119000.0 25 0 482990.0 + 34834 SQFQQEFPSL 10 70 605.7908993268463 1209.5672457204926 2 605.7908813357353 MULTI CID FTMS 0 0 0 18223 3130331.5 0.8772465502359628 1 -0.0860748291015625 3 Unmodified _SQFQQEFPSL_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 32.037481411007896 0.2488723560272515 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QSQE{M(Oxidation (M))|F}PS{I|L} 10 2 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QSQE + + 26.943 23.461 3.1393 2.2275 2.2275 49.054 0.0 0.0 0.0 0.0 1.77948461635836 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QSQE{M(Oxidation (M))|F}PS{I|L} 2.2275 - 382 + 1 1.096 34070.3 1.0 12472 5752 18223 HBL1_DMSO_200M_050219_1,18226 HBL1_DMSO_200M_050219_1,18226,SQFQQEFPSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18227 87.178 25.0 2549100.0 25 0 311320.0 + 42561 VTPPGFQLV 9 85 479.27393325796805 956.533313582736 2 479.2738525271416 MULTI CID FTMS 0 0 0 18223 1151987.5 0.3307602471828008 5 -0.4753646850585937 4 Unmodified _VTPPGFQLV_ ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6 46.020951573049366 0.0490941689151868 3 {M(Oxidation (M))|F}Q{I|L}S{I|L}V 6 7 41.317 0.0 0.0 4.3195 0.0 0.0 251.1275807111344 0.0 251.1275807111344 0.0 25.399765408488904 0.0 0.0 0 0.6989700043360187 0.0 0.3807196863200844 0.75 {M(Oxidation (M))|F}Q{I|L}S{I|L}V 4.3195 - 380 1 1.096 55636.9 1.0 12473 5752 18223 HBL1_DMSO_200M_050219_1,18227 HBL1_DMSO_200M_050219_1,18227,VTPPGFQLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18228 87.18 35.0 1987200.0 25 0 353390.0 + 36268 SYFEKGPLTF 10 85 594.8004201189841 1187.586287304768 2 594.8005248904228 MULTI CID FTMS 0 0 0 18223 838148.0 0.68471430785912 2 -0.2201309204101562 5 Unmodified _SYFEKGPLTF_ ENSG00000172687|ENST00000683779|ZNF738;ENSG00000197020|ENST00000358296|ZNF100;nc|ENSG00000172687|Q8NE65-2|ZNF738 103.82355648334676 0.0065995892596364 3 {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}EKG[{I|L}P]T{M(Oxidation (M))|F} 10 0 {[{M(Oxidation (M))|F}C]|[YS]} + + 76.301 3.7236 1.4889 6.4249 6.4249 60.406 0.0 0.0 0.0 0.0 37.93686536267198 0.0 0.0 0 2.3243923658886185 0.0 2.094187677400525 0.0 + + {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}EKG[{I|L}P]T{M(Oxidation (M))|F} 6.4249 + + 957 + 1 1.096 58910.9 1.0 12474 5752 18223 HBL1_DMSO_200M_050219_1,18228 HBL1_DMSO_200M_050219_1,18228,SYFEKGPLTF True True SYFEKGPLTF 87.179501 594.800524890423 32882980.0 18223.0 ENSG00000197020|ENST00000358296|ZNF100;;nc|ENSG00000172687|Q8NE65-2|ZNF738;;ENSG00000172687|ENST00000683779|ZNF738 11.768895467122396 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18229 87.181 31.0 1679700.0 25 0 189000.0 + 3357 AYPEYLITY 9 69 566.7818223994358 1131.5490918656717 2 566.7817260622978 MULTI CID FTMS 0 0 0 18223 734554.375 0.0686810406207296 -3 0.3097686767578125 6 Unmodified _AYPEYLITY_ ENSG00000107854|ENST00000371627|TNKS2;ENSG00000173273|ENST00000310430|TNKS 28.486842064014134 0.1687311288560894 3 [EP]Y{I|L}AY 6 4 33.231 0.0 0.0 2.9368 0.0 0.0 0.0 392.182245512409 392.182245512409 5.285923086544635 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [EP]Y{I|L}AY 2.9368 - 202 1 1.096 46625.3 1.0 12475 5752 18223 HBL1_DMSO_200M_050219_1,18229 HBL1_DMSO_200M_050219_1,18229,AYPEYLITY False True AYPEYLITY 87.18068 566.781726062298 184557152.0 18223.0 ENSG00000107854|ENST00000371627|TNKS2;;ENSG00000173273|ENST00000310430|TNKS 6.462781429290772 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18230 87.189 482.0 602550.0 25 0 154110.0 -1 0 92 1173.1676245175986 3516.481044152996 3 1173.835620105267 MULTI CID FTMS 0 0 0 18223 457603.3125 0.0229659180664683 -3 0.3097686767578125 7 3 GYW 3 -1 11.682 0.0 0.0 0.33222 0.0 0.0 1944.6741116352207 1162.627770670451 3107.301882305672 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYW 0.33222 - 160 + 1 1.096 231825.4 1.0 12476 5752 18223 HBL1_DMSO_200M_050219_1,18230 HBL1_DMSO_200M_050219_1,18230, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18231 87.191 52.0 1188500.0 25 0 157860.0 + 30845 RILEFDYEM 9 66 608.2893059088474 1214.564058884495 2 608.2895995974541 MULTI CID FTMS 0 0 0 18223 375560.0 0.5915823638957706 -1 0.115234375 8 Unmodified _RILEFDYEM_ ENSG00000136982|ENST00000313655|DSCC1 23.78978130925829 0.2284941198415988 3 E{M(Oxidation (M))|F}DYEM 6 3 51.657 0.0 0.0 4.2531 0.0 0.0 382.2696705548844 0.0 382.2696705548844 0.0 40.062893943202624 0.0 0.0 0 0.75 0.0 0.0 0.0 + E{M(Oxidation (M))|F}DYEM 4.2531 + + 68 1 1.096 53517.6 1.0 12477 5752 18223 HBL1_DMSO_200M_050219_1,18231 HBL1_DMSO_200M_050219_1,18231,RILEFDYEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18232 87.192 71.0 1820600.0 25 0 965050.0 + 42563 VTPPGFQLV 9 49 957.541361435577 956.5340849689768 1 957.5409423708916 MULTI CID FTMS 0 0 0 18223 339829.46875 0.2796303642943484 3 -0.2762069702148437 9 Unmodified _VTPPGFQLV_ ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6 39.94969957227396 0.0757326808254658 3 Q{I|L}S{I|L}V 5 7 45.943 0.0 0.0 4.8031 0.0 0.0 398.1952164666887 0.0 398.1952164666887 0.0 32.75576261223691 0.0 0.0 0 0.0 0.0 0.75 0.3494850021680094 Q{I|L}S{I|L}V 4.8031 - 64 1 1.096 95789.4 1.0 12478 5752 18223 HBL1_DMSO_200M_050219_1,18232 HBL1_DMSO_200M_050219_1,18232,VTPPGFQLV True True VTPPGFQLV 87.192343 957.540942370892 203032868.0 18223.0 ENSG00000196419|ENST00000360079|XRCC6;;nc|ENSG00000196419|P12956-2|XRCC6 7.851830800374349 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18233 87.194 32.0 865250.0 25 0 88278.0 44355 YLRAGSKDPL 10 53 560.3105897476634 1118.6066265621266 2 560.3106567263603 MULTI CID FTMS 0 0 0 18223 322132.875 0.4202369217297292 -1 0.115234375 10 Unmodified _YLRAGSKDPL_ ENSG00000255582|ENST00000542433|OR10G2 6.723162845929126 0.6955379296933136 3 AE{I|L} 3 8 16.198 0.0 0.0 1.448 0.0 0.0 451.2533073256016 351.16770349674067 802.4210108223423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AE{I|L} 1.448 - 30 + 1 1.096 25992.6 1.0 12479 5752 18223 HBL1_DMSO_200M_050219_1,18233 HBL1_DMSO_200M_050219_1,18233,YLRAGSKDPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18234 87.195 53.0 1356300.0 25 0 229600.0 + 30826 RIINGIIISV 10 69 549.3557167932314 1096.6968806532627 2 549.3560058474541 MULTI CID FTMS 0 0 0 18223 290257.84375 0.1527373516729846 -2 0.1845474243164062 11 Unmodified _RIINGIIISV_ chr12:110661448-110688625|40|10.35|0.61|4.09|-|ENST00000439744|HVCN1,HVCN1;ENSG00000122986|ENST00000242607|HVCN1;nc|ENSG00000122986|Q96D96-2|HVCN1;nc|ENSG00000122986|Q96D96-3|HVCN1;nc|ENSG00000122986|Q96D96-4|HVCN1 22.736283301280096 0.4578556481593033 3 {I|L}{I|L}{I|L}W 4 7 41.186 0.0 0.0 3.7554 0.0 0.0 553.3338217242615 0.0 553.3338217242615 0.0 22.24546265559709 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}{I|L}{I|L}W 3.7554 - 56 1 1.096 58311.6 1.0 12480 5752 18223 HBL1_DMSO_200M_050219_1,18234 HBL1_DMSO_200M_050219_1,18234,RIINGIIISV False True RIINGIIISV 87.194899 549.356005847454 29238408.0 18223.0 nc|ENSG00000122986|Q96D96-4|HVCN1;;ENSG00000122986|ENST00000242607|HVCN1;;HVCN1|p.R208Q|1|0.41|ENSG00000122986|chr12:110651237-110651237|C/T|missense_variant;;nc|ENSG00000122986|Q96D96-3|HVCN1;;nc|ENSG00000122986|Q96D96-2|HVCN1;;chr12:110661448-110688625|40|10.35|0.61|4.09|-|ENST00000439744|HVCN1,HVCN1 3.707914272944132 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18235 87.197 78.0 772400.0 25 0 93267.0 + 17417 KMWEEAISL 9 80 553.7799215451337 1105.5452901570673 2 553.7814819216728 MULTI CID FTMS 0 0 0 18223 288441.09375 0.3789830602841623 -3 0.3097686767578125 12 Unmodified _KMWEEAISL_ ENSG00000134516|ENST00000520908|DOCK2;ENST00000523351.5_1_5:169188379-169509859:+|nuORF 26.268140514670165 0.1969607489560049 3 [WE]EAMK{I|L}S{I|L} 9 4 + 36.832 0.0 0.0 3.3316 3.3316 76.228 0.0 0.0 0.0 0.7572071393811868 19.87720313996633 0.7572071393811868 6.039944911051624 0 0.8182503180159344 0.0 0.4247425010840047 0.0 [WE]EAMK{I|L}S{I|L};[Y{M(Oxidation (M))|F}][YT]EA{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}A{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}EA{I|L}S{I|L} 3.3316;2.7853;2.4716 -;-;- 108 1 1.096 51198.3 1.0 12481 5752 18223 HBL1_DMSO_200M_050219_1,18235 HBL1_DMSO_200M_050219_1,18235,KMWEEAISL False True KMWEEAISL 87.196688 553.781481921673 11336480.0 18223.0 ENST00000523351.5_1_5:169188379-169509859:+|nuORF;;ENSG00000134516|ENST00000520908|DOCK2 5.2531938552856445 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18236 87.207 583.0 335360.0 25 0 21659.0 + -1 MNWRYCRLWCL 11 144 837.38153616027 1672.74851938734 2 837.8821899294853 MULTI CID FTMS 0 0 0 18223 240857.5625 0.4638753488495263 -2 0.1845474243164062 13 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))NWRYC(Carbamidomethyl (C))RLWC(Carbamidomethyl (C))L_ REV__ENST00000584052.5_1_18:21043977-21044085:+|nuORF 1.4819007175156935 0.86815623132643 3 DEAQQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[SG][{I|L}V] 13 -1 76.319 0.0 0.0 4.5625 0.0 0.0 248.0910511701188 0.0 248.0910511701188 0.0 52.59051366533389 0.0 0.0 0 0.5 0.0 0.7059771852360797 1.5044321917401078 DEAQQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[SG][{I|L}V] 4.5625 - 1454 1 1.096 135621.4 1.0 12482 5752 18223 HBL1_DMSO_200M_050219_1,18236 HBL1_DMSO_200M_050219_1,18236,MNWRYCRLWCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18237 87.209 121.0 480660.0 25 0 41820.0 -1 CLTCFLLMF 9 90 602.781301781454 1203.548050629708 2 602.7816039919853 MULTI CID FTMS 0 0 0 18223 229862.6875 0.3717775030012684 2 -0.2201309204101562 14 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))LTC(Carbamidomethyl (C))FLLMF_ ENST00000566239.1_1_15:65822954-65844187:+|nuORF 16.942295170755138 0.3780752226737986 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHYP{I|L} 7 -1 53.18 0.0 0.0 4.4186 0.0 0.0 0.0 293.09354460187063 293.09354460187063 3.2263728016968685 0.0 0.0 0.0 0 0.0 2.0 1.048455006504028 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHYP{I|L} 4.4186 - 791 1 1.096 49461.9 1.0 12483 5752 18223 HBL1_DMSO_200M_050219_1,18237 HBL1_DMSO_200M_050219_1,18237,CLTCFLLMF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18238 87.221 670.0 138230.0 25 0 32668.0 -1 0 70 1178.4974286279248 3532.470456483975 3 1178.831713855267 MULTI CID FTMS 0 0 0 18223 195269.921875 0.6221341364762106 -1 0.115234375 15 3 Y 1 -1 6.9897 0.0 0.0 0.19787 0.0 0.0 1327.4962876380744 2038.9406226770768 3366.436910315151 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.19787 - 24 + 1 1.096 76368.9 1.0 12484 5752 18223 HBL1_DMSO_200M_050219_1,18238 HBL1_DMSO_200M_050219_1,18238, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18239 87.233 678.0 310150.0 25 0 43870.0 + 45535 YTYEFDFSKV 10 153 649.801355721556 1297.588158509912 2 650.3011962771416 MULTI CID FTMS 0 0 0 18223 184610.78125 0.6760246687904875 -2 0.1845474243164062 16 Unmodified _YTYEFDFSKV_ ENSG00000126814|ENST00000261249|TRMT5 80.6760300276096 0.0165137828474802 3 YTYE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}SKV 10 0 + 109.81 0.0 0.0 8.4622 8.4622 92.583 0.0 0.0 0.0 36.53212513775344 19.80327215271494 19.80327215271494 8.57840941039747 0 0.4247425010840047 2.0 1.3921590589602533 1.2530834337684311 + + YTYE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}SKV;YTY{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}SKV;YTYE{M(Oxidation (M))|F}D[KG]Y{I|L};YTYE{M(Oxidation (M))|F}D[KG]{I|L}Y;YTY{M(Oxidation (M))|F}ED[KG]Y{I|L};YTY{M(Oxidation (M))|F}ED[KG]{I|L}Y;YTY{M(Oxidation (M))|F}V{M(Oxidation (M))|F}KDC{I|L};YTY{M(Oxidation (M))|F}V{M(Oxidation (M))|F}DKC{I|L};YTY{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[EC]KV;YTY{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM}VKC{I|L} 8.4622;7.8011;6.9361;6.4629;6.275;5.8018;5.0464;4.9501;4.8001;4.7205 +;-;-;-;-;-;-;-;-;- + 1874 + 1 1.096 157561.5 1.0 12485 5752 18223 HBL1_DMSO_200M_050219_1,18239 HBL1_DMSO_200M_050219_1,18239,YTYEFDFSKV True True YTYEFDFSKV 87.232928 650.301196277142 3561797.0 18223.0 ENSG00000126814|ENST00000261249|TRMT5 9.244673093159994 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18240 87.244 618.0 326990.0 25 0 38105.0 -1 0 142 1034.1699036729167 3099.4878816189503 3 1034.508227527142 MULTI CID FTMS 0 0 0 18223 172645.953125 0.5968504618385625 -1 0.115234375 17 3 [MN]{I|L}{[ES]|[DT]|[{I|L}C]}{I|L}DDV 9 -1 61.41 0.0 0.0 1.9813 0.0 0.0 0.0 2080.0031153438126 2080.0031153438126 20.43588829147977 0.0 0.0 0.0 0 0.0 2.0 1.363982988912431 0.5796896906561032 [MN]{I|L}{[ES]|[DT]|[{I|L}C]}{I|L}DDV 1.9813 - 24165 1 1.096 132315.2 1.0 12486 5752 18223 HBL1_DMSO_200M_050219_1,18240 HBL1_DMSO_200M_050219_1,18240, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18241 87.247 89.0 592490.0 25 0 80955.0 + + 23014 SLLDPVPEV 9 86 484.773991919106 967.533430905012 2 484.7690307497978 MULTI CID FTMS 0 0 0 -1 0 18 Unmodified _LSIDAISLH_ ENSG00000089154|ENST00000300648|GCN1 26.88365393820708 0.1891292719743517 3 {[TV]|[{I|L}S]}VE 4 -1 27.223 0.0 0.0 2.8137 0.0 0.0 0.0 536.282917559562 536.282917559562 6.280994675737759 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}VE 2.8137 - 243 1 1.096 45569.0 1.0 12487 5752 18223 HBL1_DMSO_200M_050219_1,18241 HBL1_DMSO_200M_050219_1,18241,LSIDAISLH False False SLLDPVPEV 87.246907 484.769030749798 2067798.625 18223.0 ENSG00000089154|ENST00000300648|GCN1 4.2393561999003095 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18242 87.249 84.0 576180.0 25 0 85364.0 + 21053 LPAELINQI 9 89 505.79747336813 1009.58039380306 2 505.7969238162041 MULTI CID FTMS 0 0 0 18223 132560.5 0.0053727458040172 10 -0.9966964721679688 19 Unmodified _LPAELINQI_ ENSG00000160877|ENST00000292431|NACC1 28.486842064014134 0.1687311288560894 3 [VP]DV{I|L}{I|L} 6 6 21.859 0.0 0.0 2.1651 0.0 0.0 0.0 370.1720435435476 370.1720435435476 3.1251900763250617 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 [VP]DV{I|L}{I|L} 2.1651 - 133 1 1.096 41539.1 1.0 12488 5752 18223 HBL1_DMSO_200M_050219_1,18242 HBL1_DMSO_200M_050219_1,18242,LPAELINQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18243 87.256 423.0 497190.0 25 0 139530.0 + 31028 RLGPTGGF 8 123 402.7206534883488 803.4267540434977 2 402.7210265994072 MULTI CID FTMS 0 0 0 18223 120272.171875 0.5057866611138515 -2 0.1845474243164062 20 Unmodified _RLGPTGGF_ REV__ENST00000244745.3_2_6:21596641-21596935:+|nuORF 9.347437153973935 0.7675937258251505 3 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 1.5526 0.0 0.0 638.3476047288477 0.0 638.3476047288477 0.0 3.701813447471221 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.5526 + + 22 + 1 1.096 167378.7 1.0 12489 5752 18223 HBL1_DMSO_200M_050219_1,18243 HBL1_DMSO_200M_050219_1,18243,RLGPTGGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18245 87.261 40.0 1463800.0 25 0 234490.0 18691 LAIWEASL 8 72 451.75254133747273 901.4905297417456 2 451.7527648806572 MULTI CID FTMS 0 0 0 18244 1787309.5 0.0766042161111186 22 -2.2469482421875 1 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 34.18733598223924 0.3315367612694167 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 3 55.45 0.0 0.0 6.1509 0.0 0.0 0.0 199.108070577542 199.108070577542 35.043869621537524 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 6.1509 - 193 1 1.13 53128.7 1.0 12490 5753 18244 HBL1_DMSO_200M_050219_1,18245 HBL1_DMSO_200M_050219_1,18245,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18246 87.262 37.0 1630400.0 25 0 115810.0 + 29590 QLVDIIEKV 9 92 528.8186749961957 1055.6227970591913 2 528.8188354372978 MULTI CID FTMS 0 0 0 18244 2842441.25 0.1795489290261418 4 -0.3892898559570312 2 Unmodified _QLVDIIEKV_ ENSG00000131467|ENST00000590720|PSME3;ENST00000593111.1_1_17:40986588-40991030:+|nuORF;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3 61.60191391372663 0.0251951588191061 3 [Q{I|L}]VD{I|L}{I|L}EKV 9 0 + 76.973 0.0 0.0 7.2918 7.2918 95.791 0.0 0.0 0.0 51.16374547140625 11.271211393095244 11.271211393095244 53.31849679443676 0 1.079689690656103 1.5228787452803376 0.4247425010840047 0.25 + + [Q{I|L}]VD{I|L}{I|L}EKV;{NN|[MP]|[D{I|L}]|[EV]}K{[HG]|PP}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{[HG]|PP}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[TV]|[{I|L}S]}G[RH]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RH]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;[VS]A[RH]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V 7.2918;2.2409;2.0203;1.9487;1.6918;1.2502 +;-;-;-;-;- + 301 + 1 1.13 53267.4 1.0 12491 5753 18244 HBL1_DMSO_200M_050219_1,18246 HBL1_DMSO_200M_050219_1,18246,QLVDIIEKV True True QLVDIIEKV 87.262278 528.818835437298 403932912.0 18244.0 ENST00000593111.1_1_17:40986588-40991030:+|nuORF;;ENSG00000131467|ENST00000590720|PSME3;;nc|ENSG00000131467|P61289-2|PSME3;;nc|ENSG00000131467|P61289-3|PSME3 5.904599666595459 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18247 87.263 38.0 1397700.0 25 0 211680.0 + 29280 QIESLHAETH 10 76 582.7853227646449 1163.5560925960897 2 582.7860595583916 MULTI CID FTMS 0 0 0 18244 2077184.875 0.2459979884911137 4 -0.3892898559570312 3 Unmodified _QIESLHAETH_ REV__ENSG00000170959|ENST00000684477|DCDC1;REV__nc|ENSG00000170959|M0R2J8|DCDC1 16.149105407346934 0.5765757077271437 3 {I|L}{I|L}DEQ{I|L} 6 -1 43.862 0.0 0.0 3.7696 0.0 0.0 0.0 449.15354067642096 449.15354067642096 25.885540741363187 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {I|L}{I|L}DEQ{I|L} 3.7696 - 144 1 1.13 45652.9 1.0 12492 5753 18244 HBL1_DMSO_200M_050219_1,18247 HBL1_DMSO_200M_050219_1,18247,QIESLHAETH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18248 87.265 53.0 1050400.0 25 0 126280.0 + 15717 IQYIPTELDQV 11 74 659.8480286687201 1317.68150440424 2 659.8485595583916 MULTI CID FTMS 0 0 0 18244 1030364.0625 0.1894745396659953 3 -0.3020477294921875 4 Unmodified _IQYIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 47.594388314883695 0.1309523012099263 3 [TP]E{I|L}DQT 7 5 34.443 0.0 0.0 2.6139 0.0 0.0 0.0 530.2898167423838 530.2898167423838 4.548795813768606 0.0 0.0 0.0 0 0.0 0.0 1.3764613514953892 0.0 [TP]E{I|L}DQT 2.6139 - 615 1 1.13 48766.7 1.0 12493 5753 18244 HBL1_DMSO_200M_050219_1,18248 HBL1_DMSO_200M_050219_1,18248,IQYIPTELDQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18249 87.266 65.0 1149800.0 25 0 131390.0 + 2353 AQLNKLTQL 9 100 514.8087773478536 1027.6030017625071 2 514.8083373904228 MULTI CID FTMS 0 0 0 18244 1022259.0 0.1424935418480925 -3 0.2706222534179687 5 Unmodified _AQLNKLTQL_ nc|ENSG852|P61578|ERVK-16_rec 39.94969957227396 0.0757326808254658 3 {[QN]|[E{I|L}]|[KN]}GAA{I|L}{I|L}TQ{I|L} 10 5 + 61.735 0.0 0.0 6.0077 6.0077 81.112 0.0 0.0 0.0 11.399699876253775 43.097819236154784 11.399699876253775 3.0372751160733458 0 1.0387254899964358 0.744727494896694 0.5 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}GAA{I|L}{I|L}TQ{I|L};{[QN]|[E{I|L}]|[KN]}[QA]{I|L}{I|L}TQ{I|L};{[QN]|[E{I|L}]|[KN]}G[RV]{I|L}TQ{I|L};{[QN]|[E{I|L}]|[KN]}GAA{I|L}{I|L}T[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[QA]{I|L}{I|L}T[AG]{I|L};{[QN]|[E{I|L}]|[KN]}G[RV]{I|L}T[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}{I|L}{I|L}TQ{I|L};{[QG]|[NA]}[KQ]{I|L}{I|L}TQ{I|L};{[QN]|[E{I|L}]|[KN]}GAA{I|L}{I|L}G[TA]{I|L};{NN|[MP]|[D{I|L}]|[EV]}A[RV]{I|L}TQ{I|L} 6.0077;5.7121;5.372;5.1159;4.8161;4.476;4.1359;4.083;4.0554;3.7958 -;-;-;-;-;-;-;-;-;- 485 1 1.13 66260.4 1.0 12494 5753 18244 HBL1_DMSO_200M_050219_1,18249 HBL1_DMSO_200M_050219_1,18249,AQLNKLTQL True False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 18250 87.268 91.0 1415600.0 25 0 163860.0 + 20588 LLPDLIQKV 9 138 519.8317633624328 1037.6489737916654 2 519.8317748904228 MULTI CID FTMS 0 0 0 18244 764323.375 1.0 0 0.0 6 Unmodified _LLPDLIQKV_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS 41.8396318013385 0.0653578398400075 3 {I|L}{I|L}PD{I|L}{I|L}QKV 9 0 + 62.194 0.0 0.0 5.9937 5.9937 87.744 0.0 0.0 0.0 29.155791088227105 10.25077428462167 10.25077428462167 9.208187539523747 0 0.9247425010840048 2.0 0.0 0.4766445787094412 + + {I|L}{I|L}PD{I|L}{I|L}QKV;{I|L}{I|L}PD{I|L}{I|L}[AG]KV;{I|L}{I|L}V[EP]{I|L}QKV;{I|L}{I|L}PD{I|L}{I|L}[KA]GV;{I|L}{I|L}V[EP]{I|L}[AG]KV;{I|L}{I|L}VV[KQ]EP{I|L};{I|L}{I|L}V{I|L}{I|L}EEP{I|L};{I|L}{I|L}VV{[SA]|[TG]}{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L};{I|L}{I|L}V[EP]{I|L}[KA]GV 5.9937;5.1063;4.6052;4.1134;3.7178;3.6826;3.2991;3.2034;2.725 +;-;-;-;-;-;-;-;- + 1360 + 1 1.13 100991.2 1.0 12495 5753 18244 HBL1_DMSO_200M_050219_1,18250 HBL1_DMSO_200M_050219_1,18250,LLPDLIQKV True True LLPDLIQKV 87.268425 519.831774890423 9684032.0 18244.0 nc|ENSG00000141279|P55786-2|NPEPPS;;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;;ENSG00000141279|ENST00000322157|NPEPPS 5.674749374389648 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18251 87.273 216.0 468870.0 25 0 68397.0 + 17313 KLTDIQIEL 9 118 536.8163096388556 1071.6180663445111 2 536.8164550662041 MULTI CID FTMS 0 0 0 18244 697642.1875 1.0 0 0.0 7 Unmodified _KLTDIQIEL_ ENSG00000176049|ENST00000616793|JAKMIP2;ENSG00000188385|ENST00000684848|JAKMIP3;nc|ENSG00000176049|Q96AA8-2|JAKMIP2;nc|ENSG00000176049|Q96AA8|JAKMIP2;nc|ENSG00000188385|Q5VZ66|JAKMIP3 89.40071534611396 0.0152361884002446 3 {[QN]|[E{I|L}]|[KN]}SK{I|L}Q{I|L}E{I|L} 9 3 + 110.54 0.0 0.0 10.315 10.315 95.093 0.0 0.0 0.0 13.406206186877938 16.478174818886373 13.406206186877938 9.208187539523747 0 1.0387254899964358 1.3010299956639813 1.7218487496163564 1.2302046884880935 {[QN]|[E{I|L}]|[KN]}SK{I|L}Q{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}SK{I|L}[AG]{I|L}E{I|L};{[TV]|[{I|L}S]}EK{I|L}Q{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}TK{I|L}Q{I|L}E{I|L};[{I|L}T]DK{I|L}Q{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}SQ{I|L}K{I|L}E{I|L};{[TV]|[{I|L}S]}EK{I|L}[AG]{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}TK{I|L}[AG]{I|L}E{I|L};[{I|L}T]KD{I|L}Q{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NT{I|L}K{I|L}E{I|L} 10.315;9.4562;9.0645;8.9581;8.6015;8.3814;8.2052;8.0989;7.9493;7.8196 -;-;-;-;-;-;-;-;-;- 1367 1 1.13 82270.3 1.0 12496 5753 18244 HBL1_DMSO_200M_050219_1,18251 HBL1_DMSO_200M_050219_1,18251,KLTDIQIEL True True KLTDIQIEL 87.272523 536.816455066204 3215121.0 18244.0 nc|ENSG00000188385|Q5VZ66|JAKMIP3;;nc|ENSG00000176049|Q96AA8|JAKMIP2;;ENSG00000176049|ENST00000616793|JAKMIP2;;ENSG00000188385|ENST00000684848|JAKMIP3;;nc|ENSG00000176049|Q96AA8-2|JAKMIP2 2.843221386273702 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18252 87.275 116.0 793740.0 25 0 129580.0 45920 YYVGLFVWL 9 92 580.3107839781225 1158.6070150230448 2 580.3118163943291 MULTI CID FTMS 0 0 0 18244 515544.0 0.1252498101370074 4 -0.3892898559570312 8 Unmodified _YYVGLFVWL_ L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|182|2|anti-sense 14.581692164780916 0.4419739649577144 3 YY{I|L}S 4 6 56.186 0.0 0.0 4.8494 0.0 0.0 0.0 629.3429750142602 629.3429750142602 44.59183145787911 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YY{I|L}S 4.8494 - 54 + 1 1.13 74479.7 1.0 12497 5753 18244 HBL1_DMSO_200M_050219_1,18252 HBL1_DMSO_200M_050219_1,18252,YYVGLFVWL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 18253 87.277 99.0 830270.0 25 0 117340.0 + 11564 GIYTGFIKV 9 91 499.28969435876377 996.5648357843276 2 499.2892944216728 MULTI CID FTMS 0 0 0 18244 478958.21875 0.0792440055945523 5 -0.5244293212890625 9 Unmodified _GIYTGFIKV_ ENSG00000153179|ENST00000542104|RASSF3 43.85829265575387 0.0542763391141878 3 {[VA]|[{I|L}G]}YTG{M(Oxidation (M))|F}{I|L}KV 9 0 + 71.458 0.0 0.0 7.1704 7.1704 84.7 0.0 0.0 0.0 27.14764271519251 3.203351508593684 3.203351508593684 3.203351508593684 0 0.3494850021680094 2.0 0.7742275032520141 0.0 + + {[VA]|[{I|L}G]}YTG{M(Oxidation (M))|F}{I|L}KV;{[VA]|[{I|L}G]}YTG{M(Oxidation (M))|F}{I|L}VK 7.1704;6.849 +;- + 281 + 1 1.13 65393.2 1.0 12498 5753 18244 HBL1_DMSO_200M_050219_1,18253 HBL1_DMSO_200M_050219_1,18253,GIYTGFIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18254 87.282 293.0 496300.0 25 0 36854.0 + 31908 RTVELFYDV 9 136 571.2981548394536 1140.581756745707 2 571.2995483279228 MULTI CID FTMS 0 0 0 18244 306000.0625 1.0 0 0.0 10 Unmodified _RTVELFYDV_ ENSG00000197448|ENST00000358406|GSTK1;ENST00000473649.1_1_7:142960606-142961786:+|nuORF;ENST00000489654.1_1_7:142960606-142961286:+|nuORF;ENST00000494735.1_1_7:142960606-142960717:+|nuORF;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;nc|ENSG00000197448|Q9Y2Q3-4|GSTK1 55.50274090549119 0.0285720310785888 3 {[TV]|[{I|L}S]}RE{I|L}{M(Oxidation (M))|F}YDV 9 2 + 69.669 0.0 0.0 6.1082 6.1082 86.859 0.0 0.0 0.0 8.657142538257133 16.08726926040731 8.657142538257133 8.657142538257133 0 1.2302046884880935 0.8538719643217619 0.3807196863200844 1.0044321917401078 {[TV]|[{I|L}S]}RE{I|L}{M(Oxidation (M))|F}YDV;[{I|L}T][RD]{I|L}{M(Oxidation (M))|F}YDV;[VS]Q[RK]{M(Oxidation (M))|F}YDV;[VS][W{I|L}]{I|L}{M(Oxidation (M))|F}YDV;[VS][AG][RK]{M(Oxidation (M))|F}YDV;{[TV]|[{I|L}S]}N[RK]{M(Oxidation (M))|F}YDV;{[QS]|[NT]}V[RK]{M(Oxidation (M))|F}YDV;{[QV]|[N{I|L}]|[RA]|[KV]}S[RK]{M(Oxidation (M))|F}YDV;[AG]SV[RK]{M(Oxidation (M))|F}YDV;[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{M(Oxidation (M))|F}YDV 6.1082;5.3492;5.2836;5.2836;4.4762;4.3754;4.2928;4.0288;4.028;3.9076 -;-;-;-;-;-;-;-;-;- 501 1 1.13 110451.6 1.0 12499 5753 18244 HBL1_DMSO_200M_050219_1,18254 HBL1_DMSO_200M_050219_1,18254,RTVELFYDV True True RTVELFYDV 87.282457 571.299548327923 3708143.75 18244.0 ENST00000494735.1_1_7:142960606-142960717:+|nuORF;;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;;ENST00000489654.1_1_7:142960606-142961286:+|nuORF;;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;;nc|ENSG00000197448|Q9Y2Q3-4|GSTK1;;ENST00000473649.1_1_7:142960606-142961786:+|nuORF;;ENSG00000197448|ENST00000358406|GSTK1 6.610215346018474 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18255 87.292 563.0 315750.0 25 0 25725.0 + 44026 YIHVHFLEV 9 182 386.209181164453 1155.605714093559 3 386.2086669802666 MULTI CID FTMS 0 0 0 18244 185934.984375 1.0 0 0.0 11 Unmodified _YIHVHFLEV_ ENSG00000197429|ENST00000396478|IPP;nc|ENSG00000197429|Q9Y573-2|IPP 28.17323086031832 0.1727213568982648 3 VH{M(Oxidation (M))|F}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 6 3 21.26 0.0 0.0 1.8397 0.0 0.0 413.20723320675074 0.0 413.20723320675074 0.0 7.258332144519937 0.0 0.0 0 0.0 0.0 0.0 0.0 + VH{M(Oxidation (M))|F}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 1.8397 + + 657 1 1.13 145926.1 1.0 12500 5753 18244 HBL1_DMSO_200M_050219_1,18255 HBL1_DMSO_200M_050219_1,18255,YIHVHFLEV False True YIHVHFLEV 87.292319 386.208666980267 1426636.25 18244.0 ENSG00000197429|ENST00000396478|IPP;;nc|ENSG00000197429|Q9Y573-2|IPP 4.171408971150716 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18256 87.297 246.0 322540.0 25 0 37450.0 + 161 AALSKFIAV 9 113 460.2838245370672 918.5530961409344 2 460.2837097048759 MULTI CID FTMS 0 0 0 18244 177613.171875 0.2722388809068132 -1 0.0860748291015625 12 Unmodified _AALSKFIAV_ ENSG00000144730|ENST00000296318|IL17RD;ENST00000469841.5_1_3:57131519-57204269:-|nuORF;nc|ENSG00000144730|Q8NFM7-2|IL17RD;nc|ENSG00000144730|Q8NFM7-3|IL17RD;nc|ENSG00000144730|Q8NFM7-4|IL17RD 43.85829265575387 0.0542763391141878 3 AA{I|L}S 4 5 41.264 0.0 0.0 4.4923 0.0 0.0 0.0 573.3402804010374 573.3402804010374 -3.385788938004972 0.0 -3.385788938004972 0.0 0 0.958170666312956 1.6989700043360187 0.0 0.0 + AA{I|L}S 4.4923 + + 653 + 1 1.13 65964.6 1.0 12501 5753 18244 HBL1_DMSO_200M_050219_1,18256 HBL1_DMSO_200M_050219_1,18256,AALSKFIAV True True AALSKFIAV 87.296896 460.283709704876 9190608.0 18244.0 nc|ENSG00000144730|Q8NFM7-3|IL17RD;;nc|ENSG00000144730|Q8NFM7-2|IL17RD;;ENSG00000144730|ENST00000296318|IL17RD;;ENST00000469841.5_1_3:57131519-57204269:-|nuORF;;nc|ENSG00000144730|Q8NFM7-4|IL17RD 3.697782198588053 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18257 87.311 798.0 248340.0 25 0 25538.0 -1 0 136 881.9123615166084 0 881.9119750857353 PEAK CID FTMS 0 0 0 18244 154882.875 1.0 0 0.0 13 3 QY{M(Oxidation (M))|F}ANQEMQTC(Carbamidomethyl (C)) 11 -1 70.43 0.0 0.0 3.9976 0.0 0.0 230.16363797286664 128.07216821842033 358.235806191287 0.0 0.0 0.0 0.0 0 0.5 0.0 1.1307196863200843 1.0994850021680094 QY{M(Oxidation (M))|F}ANQEMQTC(Carbamidomethyl (C)) 3.9976 - 6333 + 1 1.13 138536.1 1.0 12502 5753 18244 HBL1_DMSO_200M_050219_1,18257 HBL1_DMSO_200M_050219_1,18257, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18258 87.324 788.0 110910.0 25 0 11401.0 -1 0 93 1059.802294909954 0 1059.802294909954 PEAK CID FTMS 0 0 0 -1 0 14 3 {I|L}EV{M(Oxidation (M))|F}QS{I|L} 7 -1 50.11 0.0 0.0 2.3664 0.0 0.0 1076.0400623767457 222.08870874576408 1298.1287711225098 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7059771852360797 2.089136830878453 {I|L}EV{M(Oxidation (M))|F}QS{I|L} 2.3664 - 1178 + 1 1.13 70397.6 1.0 12503 5753 18244 HBL1_DMSO_200M_050219_1,18258 HBL1_DMSO_200M_050219_1,18258, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18259 87.338 800.0 256220.0 25 0 21022.0 + 12866 GVVPQLVKL 9 182 476.8130743891318 951.6115958450636 2 476.8134033083916 MULTI CID FTMS 0 0 0 18244 141132.03125 0.002356313387307 27 -2.7845611572265625 15 Unmodified _GVVPQLVKL_ ENSG00000182481|ENST00000330459|KPNA2 42.09456458481378 0.0639583784996157 3 [VG]VPQ[{I|L}V]K{I|L} 9 0 + 42.022 0.0 0.0 4.4158 4.4158 74.337 0.0 0.0 0.0 17.584624654749618 2.429972288419407 2.429972288419407 2.340832060333682 0 0.6382104921644451 1.3979400086720375 0.0 0.4247425010840047 + + [VG]VPQ[{I|L}V]K{I|L};[VG]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}PK{I|L};[VG]VP[AG][{I|L}V]K{I|L};[VG][{I|L}T][KP]PK{I|L} 4.4158;4.1698;3.4482;1.4497 +;-;-;- + 507 + 1 1.13 156588.0 0.6700000166893005 12504 5753 18244 HBL1_DMSO_200M_050219_1,18259 HBL1_DMSO_200M_050219_1,18259,GVVPQLVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18260 87.353 753.0 122960.0 25 0 5571.3 -1 0 118 1066.5069532665127 0 1066.509814441204 PEAK CID FTMS 0 0 0 18244 134271.9375 1.0 0 0.0 16 3 YC(Carbamidomethyl (C))C(Carbamidomethyl (C))Y{I|L}VATA 9 -1 29.166 0.0 0.0 1.3687 0.0 0.0 742.3830949101756 284.09006677799067 1026.4731616881663 0.0 0.0 0.0 0.0 0 0.0 0.0 1.677825934852436 0.0 YC(Carbamidomethyl (C))C(Carbamidomethyl (C))Y{I|L}VATA 1.3687 - 2593 + 1 1.13 64159.4 1.0 12505 5753 18244 HBL1_DMSO_200M_050219_1,18260 HBL1_DMSO_200M_050219_1,18260, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18261 87.356 172.0 436650.0 25 0 46158.0 + 39865 VFIKGCPQSL 10 80 546.2975803472366 0 546.2979003787041 PEAK CID FTMS 0 0 0 18244 131167.84375 0.5607381959479192 -2 0.2013092041015625 17 Unmodified _VFIKGCPQSL_ REV__ENSG00000134452|ENST00000362091|FBH1;REV__nc|ENSG00000134452|Q8NFZ0-2|FBH1 18.1463463914782 0.3130158145628772 3 PP 2 -1 15.217 0.0 0.0 1.3953 0.0 0.0 246.13579116567843 647.3145235650999 893.4503147307782 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PP 1.3953 - 18 + 1 1.13 65791.7 1.0 12506 5753 18244 HBL1_DMSO_200M_050219_1,18261 HBL1_DMSO_200M_050219_1,18261,VFIKGCPQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18262 87.37 800.0 483070.0 25 0 50775.0 + + -1 MYLGYEYVTAIR 12 155 739.8712655564103 1477.7279781796203 2 739.8719360232353 MULTI CID FTMS 0 0 0 18244 109481.078125 0.1873097573812478 -2 0.2013092041015625 18 2 Oxidation (M) _M(Oxidation (M))FGLRFRKNM(Oxidation (M))F_ nc|ENSG00000091513|P02787|TF;ENSG00000091513|ENST00000402696|TF 19.256988751693697 0.6345794173041263 3 MY{I|L}GYEYVTA{I|L}R 12 -1 + 126.9 0.0 0.0 8.5874 8.5874 92.107 0.0 0.0 0.0 36.61181443446618 7.67541783907258 7.67541783907258 7.67541783907258 0 1.3494850021680094 2.0 0.805462187404089 1.0838395061109685 MY{I|L}GYEYVTA{I|L}R;MY{I|L}GYEYVTAR{I|L};MY{I|L}GYEYV[Q{I|L}]S{I|L};MY{I|L}[WY]YVTA{I|L}R;MY{I|L}[WY]YVTAR{I|L};MY{I|L}GYR{M(Oxidation (M))|F}{I|L}TCV{I|L};MY{I|L}GYR{M(Oxidation (M))|F}{I|L}T{I|L}{[DS]|[MA]|[CV]|TT};MY{I|L}GYR{M(Oxidation (M))|F}{I|L}T{M(Oxidation (M))|F}AP;MY{I|L}[WY]YV[Q{I|L}]S{I|L};MY{I|L}GYR{M(Oxidation (M))|F}{I|L}{[ES]|[DT]|[{I|L}C]}S{I|L} 8.5874;8.068;7.0641;6.5;5.9806;5.2883;5.2515;5.0305;4.9766;4.6955 -;-;-;-;-;-;-;-;-;- 2544 + 1 1.13 267496.2 0.9900000095367432 12507 5753 18244 HBL1_DMSO_200M_050219_1,18262 HBL1_DMSO_200M_050219_1,18262,MFGLRFRKNMF False False MYLGYEYVTAIR 87.369937 739.871936023235 9804459.0 18244.0 nc|ENSG00000091513|P02787|TF;;ENSG00000091513|ENST00000402696|TF 9.338913599650065 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18263 87.385 800.0 203810.0 25 0 9648.0 11490 GIISTLGFVYL 11 209 394.8981210581048 0 394.9014770388603 PEAK CID FTMS 0 0 0 18244 116100.703125 0.7873985000268102 5 -0.5244293212890625 19 Unmodified _GIISTLGFVYL_ ENSG00000140519|ENST00000268122|RHCG;ENST00000558184.1_1_15:90021028-90029524:-|nuORF 7.0370850670814 0.4761840153648598 3 G{I|L}{I|L}[SG]E 6 6 12.229 0.0 0.0 1.5523 0.0 0.0 146.4060035288507 82.0669420831664 228.4729456120171 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.0 G{I|L}{I|L}[SG]E 1.5523 - 89 + 1 1.13 127210.1 0.550000011920929 12508 5753 18244 HBL1_DMSO_200M_050219_1,18263 HBL1_DMSO_200M_050219_1,18263,GIISTLGFVYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18264 87.391 311.0 353320.0 25 0 39749.0 + 12476 GVALLHTGPSL 11 146 532.8088799324801 1063.60320693176 2 532.8090698122978 MULTI CID FTMS 0 0 0 18244 111622.8359375 0.0123715274056395 11 -1.1934661865234375 20 Unmodified _GVALLHTGPSL_ REV__ENSG00000161996|ENST00000293879|WDR90;REV__ENST00000547407.5_1_16:712941-717586:+|nuORF;REV__ENST00000549024.5_1_16:711101-717586:+|nuORF;REV__ENST00000553080.1_1_16:716564-717586:+|nuORF;REV__nc|ENSG00000161996|Q96KV7-7|WDR90 30.63653989081413 0.3728473165938781 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHN{I|L} 9 -1 + 54.759 0.0 0.0 5.1485 5.1485 83.492 0.0 0.0 0.0 25.6424927368726 8.45098040014257 8.45098040014257 8.45098040014257 0 0.8182503180159344 2.0 0.8494850021680094 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHQV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}AA[HA]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}AA[H{I|L}]A;{[QN]|[E{I|L}]|[KN]}{I|L}[HV]QVN{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[HV]N{I|L}N{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[HV][AG]VN{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[HK][TP]N{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[HV]GG{I|L}N{I|L};{I|L}{I|L}E[HV]QVN{I|L} 5.1485;4.3539;3.2556;2.3292;1.6069;1.4894;0.74111;0.74111;0.62365;0.48211 -;-;-;-;-;-;-;-;-;- 581 + 1 1.13 91146.1 1.0 12509 5753 18244 HBL1_DMSO_200M_050219_1,18264 HBL1_DMSO_200M_050219_1,18264,GVALLHTGPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18266 87.395 1.7 26908000.0 25 0 3065900.0 + -1 SVLKSLVEI 9 66 494.3085186139824 493.3012421473824 1 494.3088867068291 MULTI CID FTMS 0 0 0 18265 33732040.0 1.0 0 0.0 1 ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-3|IPO5;nc|ENSG00000065150|O00410-2|IPO5 3 [VS]{I|L}K 4 -1 31.427 0.0 0.0 6.3707 0.0 0.0 0.0 62.999123577323054 62.999123577323054 13.239087409443188 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]{I|L}K 6.3707 - 57 1 1.131 39455.7 1.0 12510 5754 18265 HBL1_DMSO_200M_050219_1,18266 HBL1_DMSO_200M_050219_1,18266, False False SVLKSLVEI 87.394918 494.308886706829 535180256.0 18265.0 ENSG00000065150|ENST00000651721|IPO5;;nc|ENSG00000065150|O00410-3|IPO5;;nc|ENSG00000065150|O00410-2|IPO5 3.418428579966227 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18267 87.396 20.0 3083700.0 25 0 471450.0 + 2296 AQIEAFVRL 9 67 523.8033719294538 1045.5921909257074 2 523.8036987185478 MULTI CID FTMS 0 0 0 18265 2707457.5 1.0 0 0.0 2 Unmodified _AQIEAFVRL_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000524795.5_1_15:66587446-66615029:+|nuORF;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;ENST00000565281.5_1_15:66585934-66615040:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 47.74868867922204 0.0453060283459952 3 [QA]{I|L}EA{M(Oxidation (M))|F}V[R{I|L}] 9 0 [QA] + + 48.474 17.715 8.8979 4.636 4.636 54.463 0.0 0.0 0.0 0.0 34.494332193581414 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.3252574989159953 + + [QA]{I|L}EA{M(Oxidation (M))|F}V[R{I|L}] 4.636 + + 55 + 1 1.131 53696.3 1.0 12511 5754 18265 HBL1_DMSO_200M_050219_1,18267 HBL1_DMSO_200M_050219_1,18267,AQIEAFVRL True True AQIEAFVRL 87.396097 523.803698718548 26610588.0 18265.0 ENST00000565281.5_1_15:66585934-66615040:+|nuORF;;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;;ENST00000524795.5_1_15:66587446-66615029:+|nuORF;;nc|ENSG00000166938|Q8TF46-2|DIS3L;;nc|ENSG00000166938|Q8TF46-3|DIS3L;;nc|ENSG00000166938|Q8TF46-4|DIS3L;;ENSG00000166938|ENST00000319212|DIS3L 5.632049719492595 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18268 87.397 13.0 3896900.0 25 0 449620.0 + 31517 RQIDQFLVV 9 51 559.3220898734072 1116.6296268136143 2 559.3223144412041 MULTI CID FTMS 0 0 0 18265 3865857.75 0.4296335533258095 -2 0.2201309204101562 3 Unmodified _RQIDQFLVV_ ENSG00000057935|ENST00000405094|MTA3;ENSG00000149480|ENST00000278823|MTA2;ENST00000531261.1_1_11:62365080-62365595:-|nuORF;nc|ENSG00000057935|Q9BTC8-2|MTA3;nc|ENSG00000149480|O94776-2|MTA2 15.248480904072842 0.4239247793462406 3 Q{M(Oxidation (M))|F}{I|L}VV 5 4 45.846 0.0 0.0 4.1058 0.0 0.0 512.2711659162125 0.0 512.2711659162125 0.0 35.38848016779836 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.0 + Q{M(Oxidation (M))|F}{I|L}VV 4.1058 + + 17 1 1.131 48950.6 1.0 12512 5754 18265 HBL1_DMSO_200M_050219_1,18268 HBL1_DMSO_200M_050219_1,18268,RQIDQFLVV False True RQIDQFLVV 87.397277 559.322314441204 81542456.0 18265.0 nc|ENSG00000057935|Q9BTC8-2|MTA3;;ENST00000531261.1_1_11:62365080-62365595:-|nuORF;;ENSG00000149480|ENST00000278823|MTA2;;nc|ENSG00000149480|O94776-2|MTA2;;ENSG00000057935|ENST00000405094|MTA3 6.885521252950032 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18269 87.398 26.0 1722000.0 25 0 139060.0 + 16499 KALQFLEEV 9 75 538.8036058687809 1075.5926588043617 2 538.8044921755791 MULTI CID FTMS 0 0 0 18265 1535864.125 0.6235637302681815 -2 0.2201309204101562 4 Unmodified _KALQFLEEV_ ENSG00000146731|ENST00000275603|CCT6A;nc|ENSG00000146731|P40227-2|CCT6A 40.23920728925047 0.0741434193262949 3 {[VA]|[{I|L}G]}A[KA]{M(Oxidation (M))|F}{I|L}EEV 10 4 + 72.955 0.0 0.0 6.7828 6.7828 85.963 0.0 0.0 0.0 13.214562785677655 16.53212513775344 13.214562785677655 5.0 0 0.805462187404089 1.5228787452803376 0.0 1.6307196863200843 {[VA]|[{I|L}G]}A[KA]{M(Oxidation (M))|F}{I|L}EEV;{[VA]|[{I|L}G]}A{M(Oxidation (M))|F}[KA]{I|L}EEV;{[QN]|[E{I|L}]|[KN]}VV{M(Oxidation (M))|F}{I|L}EEV;[Q{I|L}][KA]{M(Oxidation (M))|F}{I|L}EEV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}VV{I|L}EEV;[Q{I|L}]{M(Oxidation (M))|F}[KA]{I|L}EEV;{[VA]|[{I|L}G]}[RP]{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V 6.7828;6.318;5.5542;5.3194;4.9257;4.8545;2.6582 -;-;-;-;-;-;- 225 1 1.131 43832.9 1.0 12513 5754 18265 HBL1_DMSO_200M_050219_1,18269 HBL1_DMSO_200M_050219_1,18269,KALQFLEEV True True KALQFLEEV 87.398454 538.804492175579 21675216.0 18265.0 nc|ENSG00000146731|P40227-2|CCT6A;;ENSG00000146731|ENST00000275603|CCT6A 1.7802026271820068 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18270 87.4 41.0 1246800.0 25 0 165260.0 + 35101 SQVQQLISL 9 95 508.2930406295977 1014.5715283259956 2 508.2930175662041 MULTI CID FTMS 0 0 0 18265 1025462.25 0.5546258642432239 1 -0.0560760498046875 5 Unmodified _SQVQQLISL_ ENSG00000021776|ENST00000156471|AQR 38.17557092003332 0.0854718145212029 3 {I|L}QSHS{I|L} 6 6 49.488 0.0 0.0 4.8777 0.0 0.0 331.21088487072046 0.0 331.21088487072046 0.0 35.50820653692661 0.0 0.0 0 0.0 0.0 0.75 0.6861818737241735 {I|L}QSHS{I|L} 4.8777 - 464 + 1 1.131 45539.8 1.0 12514 5754 18265 HBL1_DMSO_200M_050219_1,18270 HBL1_DMSO_200M_050219_1,18270,SQVQQLISL True True SQVQQLISL 87.399633 508.293017566204 12999463.0 18265.0 ENSG00000021776|ENST00000156471|AQR 4.22293758392334 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18271 87.401 55.0 1215100.0 25 0 84569.0 + 15574 IPYLQIRSI 9 75 551.8350569936524 1101.6555610541047 2 551.8351928591728 MULTI CID FTMS 0 0 0 18265 772553.6875 0.7328316473052878 -1 0.1340560913085937 6 Unmodified _IPYLQIRSI_ ENSG00000163093|ENST00000295240|BBS5 36.506200033944 0.094635877243972 3 {I|L}PY{I|L}Q{I|L} 6 3 70.75 0.0 0.0 6.4222 0.0 0.0 0.0 371.2060946100219 371.2060946100219 44.56485629844558 0.0 0.0 0.0 0 1.1989700043360187 1.6989700043360187 0.0 0.0 + {I|L}PY{I|L}Q{I|L} 6.4222 + + 107 + 1 1.131 60847.5 1.0 12515 5754 18265 HBL1_DMSO_200M_050219_1,18271 HBL1_DMSO_200M_050219_1,18271,IPYLQIRSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18272 87.404 119.0 645540.0 25 0 134130.0 -1 0 76 399.7233862909069 797.4322196486138 2 399.7234680056572 MULTI CID FTMS 0 0 0 18265 626644.625 0.6480447223464818 1 -0.0560760498046875 7 3 {[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}K{I|L} 6 -1 + 52.101 0.0 0.0 6.5335 6.5335 60.741 0.0 0.0 0.0 26.478174818886377 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.2887254899964357 {[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}K{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}{I|L}K;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{M(Oxidation (M))|F}{I|L}K;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{M(Oxidation (M))|F}K{I|L} 6.5335;6.5335;5.4738;5.4738 -;-;-;- 55 + 1 1.131 68155.2 1.0 12516 5754 18265 HBL1_DMSO_200M_050219_1,18272 HBL1_DMSO_200M_050219_1,18272, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18273 87.405 87.0 506130.0 25 0 80315.0 + + 27863 GVLPFVRGV 9 77 471.952420540289 1412.835432221067 3 471.9521667361259 MULTI CID FTMS 0 0 0 18265 536432.25 0.2621528571062048 5 -0.4557266235351562 8 Unmodified _PLRRGMKRMRI_ ENST00000584444.5_1_17:18156710-18162004:-|nuORF;ENSG00000177731|ENST00000327031|FLII;ENST00000582626.1_1_17:18160183-18162004:-|nuORF;ENST00000478416.1_1_17:18157237-18162004:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII 3.5964929083625545 0.858179447565866 3 [VG]AV[H{I|L}]P{I|L} 8 -1 18.204 0.0 0.0 1.2885 0.0 0.0 0.0 623.3338812779608 623.3338812779608 5.105538296906151 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [VG]AV[H{I|L}]P{I|L} 1.2885 - 84 1 1.131 47643.7 1.0 12517 5754 18265 HBL1_DMSO_200M_050219_1,18273 HBL1_DMSO_200M_050219_1,18273,PLRRGMKRMRI False False GVLPFVRGV 87.405441 471.952166736126 6593375.0 18265.0 ENST00000584444.5_1_17:18156710-18162004:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;ENST00000582626.1_1_17:18160183-18162004:-|nuORF;;ENST00000478416.1_1_17:18157237-18162004:-|nuORF;;nc|ENSG00000177731|Q13045-2|FLII 5.641340096791585 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18274 87.408 128.0 635490.0 25 0 108950.0 + + 32011 GVFPLRGKILNV 12 92 438.2743433902932 1311.8012007710795 3 438.2749816775322 MULTI CID FTMS 0 0 0 18265 528608.375 0.7563770456940152 1 -0.0560760498046875 9 Unmodified _RVIDRLNLKVS_ nc|ENSG00000131747|P11388-4|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;ENSG00000077097|ENST00000264331|TOP2B 11.494710602746466 0.7960433852372589 3 [VG][KC]{I|L}{I|L}K 7 -1 42.385 0.0 0.0 3.2311 0.0 0.0 0.0 567.3059786432249 567.3059786432249 19.46563537303032 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3807196863200844 [VG][KC]{I|L}{I|L}K 3.2311 - 146 + 1 1.131 70805.4 1.0 12518 5754 18265 HBL1_DMSO_200M_050219_1,18274 HBL1_DMSO_200M_050219_1,18274,RVIDRLNLKVS False False GVFPLRGKILNV 87.408054 438.274981677532 33448156.5 18265.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;nc|ENSG00000131747|P11388-2|TOP2A;;ENSG00000077097|ENST00000264331|TOP2B 5.256107409795125 3.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18275 87.41 91.0 512050.0 25 0 67697.0 + 34821 SQFPGAITL 9 70 467.2553476162436 932.4961422992872 2 467.2559387087822 MULTI CID FTMS 0 0 0 18265 521099.15625 0.9982404212117812 -2 0.2201309204101562 10 Unmodified _SQFPGAITL_ ENST00000263083.10_1_17:1944800-1946395:+|nuORF;ENST00000571710.5_1_17:1945525-1946395:+|nuORF;nc|ENSG00000262664|Q8WZ82|OVCA2 24.020572477871973 0.2255576514309169 3 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L} 8 2 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L} + + 21.454 12.509 1.7861 2.3007 2.3007 49.122 0.0 0.0 0.0 0.0 4.340612801023408 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L} 2.3007 - 93 + 1 1.131 42499.4 1.0 12519 5754 18265 HBL1_DMSO_200M_050219_1,18275 HBL1_DMSO_200M_050219_1,18275,SQFPGAITL False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 18276 87.419 504.0 269080.0 25 0 45004.0 -1 0 92 1180.4903871981892 3538.4493321947675 3 1180.827441394329 MULTI CID FTMS 0 0 0 18265 484776.46875 1.0 0 0.0 11 3 GC(Carbamidomethyl (C)){M(Oxidation (M))|F}Y 4 -1 8.3919 0.0 0.0 0.23716 0.0 0.0 1255.4276476229545 1752.8111055963502 3008.2387532193047 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GC(Carbamidomethyl (C)){M(Oxidation (M))|F}Y 0.23716 - 88 + 1 1.131 102965.9 1.0 12520 5754 18265 HBL1_DMSO_200M_050219_1,18276 HBL1_DMSO_200M_050219_1,18276, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18277 87.42 58.0 823590.0 25 0 100600.0 + + 36662 TAYPSLRLI 9 77 517.3004782879307 1032.5864036426613 2 517.3053466677666 MULTI CID FTMS 0 0 0 18265 483563.125 0.1176595986445729 -5 0.5298995971679688 12 Unmodified _TAYIDPKLL_ ENSG00000113532|ENST00000231461|ST8SIA4 10.073929032068715 0.563993802247229 3 [TA]YPS 5 -1 37.447 0.0 0.0 3.6266 0.0 0.0 0.0 510.3418673151 510.3418673151 14.771212547196626 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [TA]YPS 3.6266 - 65 + 1 1.131 45817.2 1.0 12521 5754 18265 HBL1_DMSO_200M_050219_1,18277 HBL1_DMSO_200M_050219_1,18277,TAYIDPKLL False False TAYPSLRLI 87.420464 517.305346667767 21983398.0 18265.0 ENSG00000113532|ENST00000231461|ST8SIA4 3.984448035558065 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18278 87.423 107.0 444700.0 25 0 53153.0 1901 ALYSDRSI 8 80 462.7439258842263 923.4732988352524 2 462.7440673708916 MULTI CID FTMS 0 0 0 18265 418752.5625 0.2377738161669023 32 -3.3661880493164062 13 Unmodified _ALYSDRSI_ ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5 19.438996006549623 0.6237395211498085 3 [{I|L}A]P 3 6 34.705 0.0 0.0 3.7581 0.0 0.0 0.0 639.2770540649448 639.2770540649448 22.48651242028324 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P 3.7581 - 27 + 1 1.131 41727.4 1.0 12522 5754 18265 HBL1_DMSO_200M_050219_1,18278 HBL1_DMSO_200M_050219_1,18278,ALYSDRSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18279 87.427 201.0 279810.0 25 0 40170.0 + 42749 VVFDCKFIET 10 82 600.801877342729 1199.5892017522578 2 600.8028442263603 MULTI CID FTMS 0 0 0 18265 373630.96875 0.8213514298884433 -1 0.1340560913085937 14 Unmodified _VVFDCKFIET_ ENSG00000088320|ENST00000201979|REM1;ENSG00000164949|ENST00000297596|GEM;ENSG00000166592|ENST00000299759|RRAD;ENST00000567791.1_1_16:66955609-66957656:-|nuORF 23.78978130925829 0.4341852049148378 3 VV{M(Oxidation (M))|F}T{I|L}{M(Oxidation (M))|F}KC 8 6 58.158 0.0 0.0 4.8482 0.0 0.0 0.0 259.07282434635005 259.07282434635005 41.43634753457331 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VV{M(Oxidation (M))|F}T{I|L}{M(Oxidation (M))|F}KC 4.8482 - 227 + 1 1.131 46123.8 1.0 12523 5754 18265 HBL1_DMSO_200M_050219_1,18279 HBL1_DMSO_200M_050219_1,18279,VVFDCKFIET False True VVFDCKFIET 87.42657 600.80284422636 3453751.5 18265.0 ENSG00000088320|ENST00000201979|REM1;;ENSG00000164949|ENST00000297596|GEM;;ENST00000567791.1_1_16:66955609-66957656:-|nuORF;;ENSG00000166592|ENST00000299759|RRAD 3.0461436112721763 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18280 87.431 255.0 487930.0 25 0 59438.0 + 36376 SYQEMIANL 9 154 534.7557162512412 1067.4968795692823 2 534.7560302615166 MULTI CID FTMS 0 0 0 18265 376298.96875 0.5499976431739833 -1 0.1340560913085937 15 Unmodified _SYQEMIANL_ ENSG00000116649|ENST00000376957|SRM 66.45667989310934 0.0225072657982126 3 A{I|L}MESC(Carbamidomethyl (C)){I|L} 7 7 46.336 0.0 0.0 4.3406 0.0 0.0 245.13495437572607 0.0 245.13495437572607 0.0 24.15700843243158 0.0 0.0 0 0.805462187404089 0.0 1.1307196863200843 0.0 A{I|L}MESC(Carbamidomethyl (C)){I|L} 4.3406 - 952 + 1 1.131 98081.9 1.0 12524 5754 18265 HBL1_DMSO_200M_050219_1,18280 HBL1_DMSO_200M_050219_1,18280,SYQEMIANL True True SYQEMIANL 87.431314 534.756030261517 5372974.5 18265.0 ENSG00000116649|ENST00000376957|SRM 4.875365098317464 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18281 87.433 75.0 666460.0 25 0 69472.0 + -1 LYVCMRPSL 9 87 577.7895671743997 1153.5645814155994 2 577.7891113162041 MULTI CID FTMS 0 0 0 18265 355652.28125 0.441245598932159 4 -0.3903732299804687 16 Carbamidomethyl (C),Oxidation (M) _LYVC(Carbamidomethyl (C))M(Oxidation (M))RPSL_ REV__ENST00000474657.5_1_20:1350522-1350615:-|nuORF 13.50788311687929 0.4710407108020397 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YMC 5 -1 34.693 0.0 0.0 3.0074 0.0 0.0 0.0 519.2603243463499 519.2603243463499 20.39590623023813 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YMC 3.0074 - 128 + 1 1.131 44030.7 1.0 12525 5754 18265 HBL1_DMSO_200M_050219_1,18281 HBL1_DMSO_200M_050219_1,18281,LYVCMRPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18282 87.436 171.0 354980.0 25 0 68022.0 + 30373 RALLLGAL 8 69 413.7791092184141 825.5436655036283 2 413.7792236208916 MULTI CID FTMS 0 0 0 18265 363036.53125 0.5260776668991874 -1 0.1340560913085937 17 Unmodified _RALLLGAL_ ENST00000281187.9_1_11:134094584-134094950:+|nuORF;ENST00000525095.2_1_11:134094621-134094950:+|nuORF 30.22481116460888 0.4082965392918993 3 {I|L}{I|L}GA{I|L} 5 3 52.206 0.0 0.0 6.3239 0.0 0.0 340.2220936505875 0.0 340.2220936505875 0.0 32.28470012691339 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 + {I|L}{I|L}GA{I|L} 6.3239 + + 47 1 1.131 51823.6 1.0 12526 5754 18265 HBL1_DMSO_200M_050219_1,18282 HBL1_DMSO_200M_050219_1,18282,RALLLGAL False True RALLLGAL 87.436395 413.779223620892 5904512.5 18265.0 ENST00000281187.9_1_11:134094584-134094950:+|nuORF;;ENST00000525095.2_1_11:134094621-134094950:+|nuORF 1.7468136176466942 2.0 True 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18283 87.44 165.0 202750.0 25 0 33109.0 + 13002 HAPSIVFI 8 66 442.2554338195976 882.4963147059952 2 442.2550536990166 MULTI CID FTMS 0 0 0 18265 359627.0625 0.5168798851336711 -2 0.2201309204101562 18 Unmodified _HAPSIVFI_ ENSG00000100764|ENST00000261303|PSMC1;ENST00000555787.1_1_14:90734518-90735894:+|nuORF;nc|ENSG00000100764|P62191-2|PSMC1 28.17323086031832 0.4514957916281387 3 Y{M(Oxidation (M))|F}{I|L} 3 6 26.427 0.0 0.0 2.9945 0.0 0.0 441.261830918689 0.0 441.261830918689 0.0 19.436974992327123 0.0 0.0 0 0.5 0.0 0.0 0.0 Y{M(Oxidation (M))|F}{I|L} 2.9945 - 18 + 1 1.131 32988.9 1.0 12527 5754 18265 HBL1_DMSO_200M_050219_1,18283 HBL1_DMSO_200M_050219_1,18283,HAPSIVFI False True HAPSIVFI 87.439629 442.255053699017 12976066.0 18265.0 ENSG00000100764|ENST00000261303|PSMC1;;ENST00000555787.1_1_14:90734518-90735894:+|nuORF;;nc|ENSG00000100764|P62191-2|PSMC1 4.075744311014812 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18284 87.443 106.0 621940.0 25 0 101310.0 + 1967 AMVHELLGI 9 85 491.7729639053902 981.5313748775804 2 491.7732726931572 MULTI CID FTMS 0 0 0 18265 344119.40625 0.6814324522195894 -2 0.2201309204101562 19 Unmodified _AMVHELLGI_ ENSG00000136631|ENST00000644510|VPS45;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;nc|ENSG00000136631|Q9NRW7-2|VPS45 53.57557251787612 0.0325303259649373 3 {[VA]|[{I|L}G]}[HM]E{I|L}{I|L}G{I|L} 9 2 + 60.181 0.0 0.0 6.1314 6.1314 86.518 0.0 0.0 0.0 7.993405494535821 16.478174818886373 7.993405494535821 7.993405494535821 0 0.7059771852360797 1.6989700043360187 0.4247425010840047 0.0 {[VA]|[{I|L}G]}[HM]E{I|L}{I|L}G{I|L};{[DS]|[MA]|[CV]|TT}[HV]E{I|L}{I|L}G{I|L};{[YC]|[HE]}V{[DS]|[MA]|[CV]|TT}{I|L}{I|L}G{I|L};[H{I|L}]{[MG]|[TS]}E{I|L}{I|L}G{I|L};[H{I|L}]D{[DS]|[MA]|[CV]|TT}{I|L}{I|L}G{I|L};{[YC]|[HE]}V[{I|L}A]M{I|L}G{I|L};[HV]E{[DS]|[MA]|[CV]|TT}{I|L}{I|L}G{I|L};[HV]{[DS]|[MA]|[CV]|TT}E{I|L}{I|L}G{I|L};{[YC]|[HE]}{I|L}{I|L}GM{I|L}G{I|L};[H{I|L}]D[{I|L}A]M{I|L}G{I|L} 6.1314;5.317;5.1125;4.4004;4.4004;4.0664;4.0515;4.0515;3.7597;3.3543 -;+;-;-;-;-;-;-;-;- + 341 1 1.131 57855.6 1.0 12528 5754 18265 HBL1_DMSO_200M_050219_1,18284 HBL1_DMSO_200M_050219_1,18284,AMVHELLGI True True AMVHELLGI 87.443047 491.773272693157 4599857.0 18265.0 ENSG00000136631|ENST00000644510|VPS45;;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;;nc|ENSG00000136631|Q9NRW7-2|VPS45 5.033847649892171 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18285 87.447 188.0 383720.0 25 0 59793.0 + 39228 FIMDDPAGNSYL 12 100 671.8031819521548 1341.5918109711097 2 671.8040649294853 MULTI CID FTMS 0 0 0 18265 335042.03125 0.8809760088231169 -1 0.1340560913085937 20 Unmodified _TYYQECLFYL_ ENSG00000109917|ENST00000227322|ZPR1 19.256988751693697 0.5244284437930726 3 [QP]NSC(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}NSY{I|L} 11 8 + 49.345 0.0 0.0 3.6781 3.6781 72.917 0.0 0.0 0.0 2.746685615228337 25.523787536356576 2.746685615228337 2.930610659927062 0 0.6989700043360187 0.0 0.805462187404089 0.7302046884880937 [QP]NSC(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}NSY{I|L};[PA]GNSC(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}NSY{I|L};[DP]V[Y{M(Oxidation (M))|F}]PAGNSY{I|L};[QP]NS[YE]AGNSY{I|L};[PA]GNS[YE]AGNSY{I|L};[QP]NS[CG]{M(Oxidation (M))|F}{I|L}NSY{I|L};[QP]GGSC(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}NSY{I|L};[QP]NSC(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}GGSY{I|L};[NG][PA]SC(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}NSY{I|L};[DP]V[Y{M(Oxidation (M))|F}]PQNSY{I|L} 3.6781;3.4597;3.3671;3.3533;3.1371;2.9977;2.9977;2.9977;2.9163;2.8743 -;-;-;-;-;-;-;-;-;- 763 1 1.131 62553.8 1.0 12529 5754 18265 HBL1_DMSO_200M_050219_1,18285 HBL1_DMSO_200M_050219_1,18285,TYYQECLFYL False False FIMDDPAGNSYL 87.446683 671.804064929485 4140796.75 18265.0 ENSG00000109917|ENST00000227322|ZPR1 6.525749206542969 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18287 87.451 10.0 16129000.0 25 0 4714100.0 -1 0 44 1173.1676245175986 3516.481044152996 3 1173.503100574017 MULTI CID FTMS 0 0 0 18286 21528624.0 1.0 0 0.0 1 3 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYGYW 7 -1 18.716 0.0 0.0 0.53224 0.0 0.0 1311.4739361257168 1162.6281781975686 2474.1021143232856 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYGYW 0.53224 - 66 + 1 1.131 144877.0 1.0 12530 5755 18286 HBL1_DMSO_200M_050219_1,18287 HBL1_DMSO_200M_050219_1,18287, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18288 87.452 5.0 8920100.0 25 0 935550.0 + 3358 AYPEYLITY 9 62 566.7818223994358 1131.5490918656717 2 566.7821533083916 MULTI CID FTMS 0 0 0 18286 10695155.0 1.0 0 0.0 2 Unmodified _AYPEYLITY_ ENSG00000107854|ENST00000371627|TNKS2;ENSG00000173273|ENST00000310430|TNKS 16.942295170755138 0.3780752226737986 3 [EP]Y{I|L}{I|L}T 6 3 34.808 0.0 0.0 3.0761 0.0 0.0 0.0 412.150263090534 412.150263090534 5.142013448532943 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.3807196863200844 0.0 + [EP]Y{I|L}{I|L}T 3.0761 + + 154 1 1.131 40543.8 1.0 12531 5755 18286 HBL1_DMSO_200M_050219_1,18288 HBL1_DMSO_200M_050219_1,18288,AYPEYLITY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18289 87.453 35.0 2065300.0 25 0 120820.0 + 22259 LPRLTPPVL 9 94 503.326445046479 1004.638337159758 2 503.3261901736259 MULTI CID FTMS 0 0 0 18286 1394148.5 0.0483663960264125 8 -0.8832855224609375 3 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 52.268347100219714 0.0353964759249114 3 [{I|L}P][{I|L}T]RPPV{I|L} 9 2 + 64.204 0.0 0.0 6.3908 6.3908 93.149 0.0 0.0 0.0 12.05809428866324 48.04113429432413 12.05809428866324 48.95055578207431 0 0.75 1.3979400086720375 1.2302046884880935 0.0 [{I|L}P][{I|L}T]RPPV{I|L};[VP]P[R{I|L}]P[{I|L}T]{I|L};{[HG]|PP}V[R{I|L}]P[{I|L}T]{I|L} 6.3908;1.5183;0.35624 -;-;- 193 1 1.131 59303.2 1.0 12532 5755 18286 HBL1_DMSO_200M_050219_1,18289 HBL1_DMSO_200M_050219_1,18289,LPRLTPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18290 87.455 49.0 935530.0 25 0 112670.0 + 34835 SQFQQEFPSL 10 80 605.7908993268463 1209.5672457204926 2 605.7912475466728 MULTI CID FTMS 0 0 0 18286 1236124.375 0.3464124625878554 4 -0.3996505737304687 4 Unmodified _SQFQQEFPSL_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 57.24910588100465 0.0438022649904578 3 [PS][YG]Q{[QS]|[NT]}{M(Oxidation (M))|F} 8 7 47.809 0.0 0.0 3.9526 0.0 0.0 0.0 312.15236469926134 312.15236469926134 24.26477176880759 0.0 0.0 0.0 0 1.0 1.3979400086720375 0.6109243748081782 0.805462187404089 [PS][YG]Q{[QS]|[NT]}{M(Oxidation (M))|F} 3.9526 - 555 1 1.131 36727.6 1.0 12533 5755 18286 HBL1_DMSO_200M_050219_1,18290 HBL1_DMSO_200M_050219_1,18290,SQFQQEFPSL True True SQFQQEFPSL 87.454689 605.791247546673 192369424.0 18286.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 7.253775437672933 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18291 87.456 50.0 1332700.0 25 0 192420.0 + 42562 VTPPGFQLV 9 91 479.27393325796805 956.533313582736 2 479.2740661501884 MULTI CID FTMS 0 0 0 18286 1034469.0625 0.2970181905753841 8 -0.8832855224609375 5 Unmodified _VTPPGFQLV_ ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6 39.957323273325 0.0756908302845263 3 {[VA]|[{I|L}G]}C(Carbamidomethyl (C))VP{I|L}S{I|L}V 9 6 + 42.067 0.0 0.0 4.3978 4.3978 81.999 0.0 0.0 0.0 0.8513877161316685 25.868734474099213 0.8513877161316685 9.208187539523742 0 0.6989700043360187 1.0457574905606752 0.3807196863200844 0.0 {[VA]|[{I|L}G]}C(Carbamidomethyl (C))VP{I|L}S{I|L}V;{[VA]|[{I|L}G]}[CG]VP{I|L}S{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG]P{I|L}S{I|L}V;[AG]{M(Oxidation (M))|F}[PG]P{I|L}S{I|L}V;[Q{I|L}]V[RD]D{I|L}V;[Q{I|L}]VW{[CP]|[EA]}{I|L}V;{[VA]|[{I|L}G]}{I|L}[WE]Q{I|L}V;{[VA]|[{I|L}G]}AV[RD]D{I|L}V;[AG]{I|L}V[RD]D{I|L}V;{[VA]|[{I|L}G]}{I|L}G[RD]D{I|L}V 4.3978;3.4352;2.8884;2.5941;2.3985;2.0837;1.6355;1.624;1.5965;1.5541 -;-;-;-;-;-;-;-;-;- 352 1 1.131 57207.0 1.0 12534 5755 18286 HBL1_DMSO_200M_050219_1,18291 HBL1_DMSO_200M_050219_1,18291,VTPPGFQLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18292 87.459 126.0 611690.0 25 0 81908.0 + 8998 FAYDGKDYLTL 11 93 653.3218651427034 1304.6291773522066 2 653.3221313357353 MULTI CID FTMS 0 0 0 18286 677173.5 0.6642911915496735 2 -0.19915771484375 6 Unmodified _FAYDGKDYLTL_ ENSG00000204592|ENST00000376630|HLA-E 59.05245873256422 0.0729907235015292 3 DYAE 4 9 49.24 0.0 0.0 3.7743 0.0 0.0 808.4333363263687 0.0 808.4333363263687 0.0 -1.558415520056542 -1.558415520056542 0.0 0 1.2059771852360797 0.0 0.6747425010840047 0.0 DYAE 3.7743 - 1712 1 1.131 64712.2 1.0 12535 5755 18286 HBL1_DMSO_200M_050219_1,18292 HBL1_DMSO_200M_050219_1,18292,FAYDGKDYLTL True True FAYDGKDYLTL 87.458603 653.322131335735 9462371.0 18286.0 ENSG00000204592|ENST00000376630|HLA-E 5.768580277760823 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18293 87.46 48.0 1204000.0 25 0 140230.0 + 37336 TIYPRIYI 8 96 519.8025781307947 1037.5906033283893 2 519.8030273318291 MULTI CID FTMS 0 0 0 18286 597896.375 1.0 0 0.0 7 Unmodified _TIYPRIYI_ REV__ENSG00000055208|ENST00000637181|TAB2;REV__nc|ENSG00000055208|Q9NYJ8-2|TAB2 32.116972079565 0.368454113111938 3 {I|L}{I|L}[DP]QK 6 -1 18.389 0.0 0.0 1.7723 0.0 0.0 0.0 340.16675013918933 340.16675013918933 0.3862778287721404 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}[DP]QK 1.7723 - 228 1 1.131 47956.8 1.0 12536 5755 18286 HBL1_DMSO_200M_050219_1,18293 HBL1_DMSO_200M_050219_1,18293,TIYPRIYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18294 87.463 162.0 468050.0 25 0 84796.0 + 13208 HGLTVPLI 8 88 425.2631560955295 848.511759257859 2 425.2634765505791 MULTI CID FTMS 0 0 0 18286 541619.9375 0.1408768251652514 4 -0.3996505737304687 8 Unmodified _HGLTVPLI_ ENSG00000113732|ENST00000519374|ATP6V0E1 45.7499826716795 0.1592378023510922 3 {[HG]|PP}{I|L}TVP{I|L}{I|L} 8 0 {[HG]|PP}{I|L}TV + + 21.911 18.913 3.7284 2.5823 2.5823 49.492 0.0 0.0 0.0 0.0 2.998037644757048 0.0 0.0 0 0.5 0.0 0.0 0.0 + + {[HG]|PP}{I|L}TVP{I|L}{I|L} 2.5823 + + 64 + 1 1.131 63881.2 1.0 12537 5755 18286 HBL1_DMSO_200M_050219_1,18294 HBL1_DMSO_200M_050219_1,18294,HGLTVPLI False True HGLTVPLI 87.463095 425.263476550579 89806410.0 18286.0 ENSG00000113732|ENST00000519374|ATP6V0E1 5.6873931884765625 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18295 87.465 89.0 202160.0 25 0 20261.0 + 36269 SYFEKGPLTF 10 50 594.8004201189841 1187.586287304768 2 594.8007079958916 MULTI CID FTMS 0 0 0 18286 371320.21875 0.3033453120159008 5 -0.5843582153320312 9 Unmodified _SYFEKGPLTF_ ENSG00000172687|ENST00000683779|ZNF738;ENSG00000197020|ENST00000358296|ZNF100;nc|ENSG00000172687|Q8NE65-2|ZNF738 6.723162845929126 0.6955379296933136 3 {M(Oxidation (M))|F} 1 9 12.764 0.0 0.0 1.0748 0.0 0.0 1022.5068022967588 0.0 1022.5068022967588 0.0 8.160116073527028 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0748 + + 13 + 1 1.131 18212.6 1.0 12538 5755 18286 HBL1_DMSO_200M_050219_1,18295 HBL1_DMSO_200M_050219_1,18295,SYFEKGPLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18296 87.474 508.0 102500.0 25 0 37719.0 -1 0 66 1030.1650534537205 3087.4733309613616 3 1030.496997058392 MULTI CID FTMS 0 0 0 18286 382271.875 0.1395000473032279 10 -1.0939178466796875 10 3 [NP]{I|L}D 4 -1 11.682 0.0 0.0 0.37838 0.0 0.0 0.0 2645.24384422724 2645.24384422724 -14.271949634605576 0.0 -14.271949634605576 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}D 0.37838 - 65 1 1.131 41831.9 1.0 12539 5755 18286 HBL1_DMSO_200M_050219_1,18296 HBL1_DMSO_200M_050219_1,18296, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18297 87.483 491.0 246940.0 25 0 21961.0 -1 0 98 886.117486095463 3540.440838515452 4 886.6182128787041 MULTI CID FTMS 0 0 0 18286 363404.71875 1.0 0 0.0 11 3 {I|L}V 2 -1 9.464 0.0 0.0 0.26731 0.0 0.0 2900.0968378524126 425.1670321100219 3325.2638699624345 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 0.26731 - 93 + 1 1.131 100308.5 1.0 12540 5755 18286 HBL1_DMSO_200M_050219_1,18297 HBL1_DMSO_200M_050219_1,18297, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18298 87.487 197.0 394510.0 25 0 38630.0 + 30846 RILEFDYEM 9 102 608.2893059088474 1214.564058884495 2 608.2895995974541 MULTI CID FTMS 0 0 0 18286 339789.75 0.5352370421039325 2 -0.19915771484375 12 Unmodified _RILEFDYEM_ ENSG00000136982|ENST00000313655|DSCC1 19.361941925380144 0.3125782356748823 3 {[QN]|[E{I|L}]|[KN]}[R{I|L}]{M(Oxidation (M))|F}DYEM 9 2 + 50.556 0.0 0.0 4.1625 4.1625 85.688 0.0 0.0 0.0 3.657424843733637 28.645162531850872 3.657424843733637 42.98577533287428 0 0.4247425010840047 1.0969100130080565 0.0 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}[R{I|L}]{M(Oxidation (M))|F}DYEM;{[QN]|[E{I|L}]|[KN]}[R{I|L}]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}[C(Carbamidomethyl (C))Q];[{I|L}T][R{I|L}]{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}[C(Carbamidomethyl (C))Q] 4.1625;0.62332;0.1507 -;-;- 261 1 1.131 61096.5 1.0 12541 5755 18286 HBL1_DMSO_200M_050219_1,18298 HBL1_DMSO_200M_050219_1,18298,RILEFDYEM False True RILEFDYEM 87.486549 608.289599597454 13492851.0 18286.0 ENSG00000136982|ENST00000313655|DSCC1 7.850639661153157 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18299 87.496 509.0 235950.0 25 0 23001.0 -1 0 135 663.0046686346227 1985.992176504068 3 663.3392822146416 MULTI CID FTMS 0 0 0 18286 329352.78125 0.8961051571269951 -1 0.0560760498046875 13 3 [C(Carbamidomethyl (C))R]{I|L}EDAQ[WK]H{M(Oxidation (M))|F}VE[R{I|L}] 15 -1 + 79.068 0.0 0.0 3.9813 3.9813 78.515 0.0 0.0 0.0 7.61760834195475 6.952187470219258 6.952187470219258 6.690067809585756 0 0.9876954943324544 0.0 0.7302046884880937 0.3807196863200844 [C(Carbamidomethyl (C))R]{I|L}EDAQ[WK]H{M(Oxidation (M))|F}VE[R{I|L}];[C(Carbamidomethyl (C))R]{I|L}EWQ[WK]H{M(Oxidation (M))|F}VE[R{I|L}];[C(Carbamidomethyl (C))R]{I|L}EDAQ[WK]H{M(Oxidation (M))|F}VV{I|L}W;[C(Carbamidomethyl (C))R]{I|L}EDAQ[RP][TP]{M(Oxidation (M))|F}VE[R{I|L}];[C(Carbamidomethyl (C))R]KNDAQ[WK]H{M(Oxidation (M))|F}VE[R{I|L}];[C(Carbamidomethyl (C))R]{I|L}EDA[AG][WK]H{M(Oxidation (M))|F}VE[R{I|L}];[C(Carbamidomethyl (C))R]{I|L}EDAQ[RP][EC]{I|L}VE[R{I|L}];[C(Carbamidomethyl (C))R]{I|L}EWQ[WK]H{M(Oxidation (M))|F}VV{I|L}W;[C(Carbamidomethyl (C))R]{I|L}EWQ[RP][TP]{M(Oxidation (M))|F}VE[R{I|L}];[C(Carbamidomethyl (C))R]{I|L}EDAQ[RP][TP]{M(Oxidation (M))|F}VV{I|L}W 3.9813;3.6444;3.6312;3.6152;3.5272;3.5266;3.3099;3.2944;3.2774;3.2652 -;-;-;-;-;-;-;-;-;- 5410 + 1 1.131 95152.6 1.0 12542 5755 18286 HBL1_DMSO_200M_050219_1,18299 HBL1_DMSO_200M_050219_1,18299, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18300 87.502 374.0 416690.0 25 0 33613.0 + 1184 AIAPIIAAV 9 129 419.7734699949407 837.5323870566814 2 419.7738220095634 MULTI CID FTMS 0 0 0 18286 310198.25 0.2793911499291667 -2 0.1901321411132812 14 Unmodified _AIAPIIAAV_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 36.46614268402704 0.0948557732959553 3 [{I|L}P]{I|L}AA{I|L}Q{I|L} 8 6 + 45.926 0.0 0.0 5.4835 5.4835 79.009 0.0 0.0 0.0 3.979400086720375 7.3068831343239395 3.979400086720375 3.0102999566398125 0 0.4322333069283655 1.2218487496163564 0.0 0.0 [{I|L}P]{I|L}AA{I|L}Q{I|L};[{I|L}P]A{I|L}A{I|L}Q{I|L};[{I|L}A]P{I|L}A{I|L}Q{I|L};[{I|L}P]AA{I|L}{I|L}Q{I|L};[{I|L}A]PA{I|L}{I|L}Q{I|L};[{I|L}A]AP{I|L}{I|L}Q{I|L};[PA]{I|L}{I|L}A{I|L}Q{I|L};AA{I|L}P{I|L}{I|L}Q{I|L};[PA]{I|L}A{I|L}{I|L}Q{I|L};AAP{I|L}{I|L}{I|L}Q{I|L} 5.4835;5.1241;5.0084;4.5544;4.4387;4.2285;3.254;2.8359;2.6844;2.1622 -;-;-;-;-;-;-;-;-;- 485 1 1.131 126562.8 1.0 12543 5755 18286 HBL1_DMSO_200M_050219_1,18300 HBL1_DMSO_200M_050219_1,18300,AIAPIIAAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18301 87.505 135.0 592620.0 25 0 82968.0 + 18660 LAHPLPVL 8 92 430.2738263144236 858.5330996956471 2 430.2734863162041 MULTI CID FTMS 0 0 0 18286 276101.84375 0.3327254822212682 -2 0.1901321411132812 15 Unmodified _LAHPLPVL_ ENSG00000215906|ENST00000426928|LACTBL1;nc|ENSG00000215906|A8MY62|LACTBL1 24.20995872069341 0.5349487244130675 3 [{I|L}A]HP{I|L} 5 3 18.526 0.0 0.0 2.1579 0.0 0.0 0.0 324.1923962262265 324.1923962262265 4.546835677101448 0.0 0.0 0.0 0 0.2742275032520141 1.0 0.0 0.0 + [{I|L}A]HP{I|L} 2.1579 + + 31 1 1.131 66556.6 1.0 12544 5755 18286 HBL1_DMSO_200M_050219_1,18301 HBL1_DMSO_200M_050219_1,18301,LAHPLPVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18302 87.516 571.0 207580.0 25 0 17982.0 + 43904 YFYDPDVGNF 10 152 618.7638907301445 1235.5132285270888 2 618.7637206912041 MULTI CID FTMS 0 0 0 18286 261599.515625 0.6509570397263226 1 -0.1119155883789062 16 Unmodified _YFYDPDVGNF_ ENSG00000171720|ENST00000305264|HDAC3;ENST00000492506.1_1_5:141016042-141016357:-|nuORF;ENST00000495485.1_1_5:141009604-141016357:-|nuORF 56.17704186161178 0.0466144807663799 3 [Y{M(Oxidation (M))|F}]DYPDV 7 5 25.762 0.0 0.0 2.0851 0.0 0.0 0.0 333.1153152792951 333.1153152792951 6.799697766009555 0.0 0.0 0.0 0 0.6421590589602533 0.0 0.0 0.0 [Y{M(Oxidation (M))|F}]DYPDV 2.0851 - 2644 1 1.131 88501.3 1.0 12545 5755 18286 HBL1_DMSO_200M_050219_1,18302 HBL1_DMSO_200M_050219_1,18302,YFYDPDVGNF True True YFYDPDVGNF 87.516162 618.763720691204 3010888.5 18286.0 ENST00000492506.1_1_5:141016042-141016357:-|nuORF;;ENST00000495485.1_1_5:141009604-141016357:-|nuORF;;ENSG00000171720|ENST00000305264|HDAC3 7.234294573465983 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18303 87.527 634.0 291840.0 25 0 37126.0 + 9074 FFFDKTEEL 9 176 588.2853495869092 1174.5561462406183 2 588.2863036990166 MULTI CID FTMS 0 0 0 18286 254911.75 1.0 0 0.0 17 Unmodified _FFFDKTEEL_ ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4 36.12702656103203 0.0967173616627612 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GVTE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E 10 8 + 57.133 0.0 0.0 4.8642 4.8642 75.047 0.0 0.0 0.0 1.84669274066296 3.063025007672877 1.84669274066296 1.84669274066296 0 0.4247425010840047 1.3979400086720375 1.1184151806525389 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GVTE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E;[VG]S{M(Oxidation (M))|F}TE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}TE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ETVC(Carbamidomethyl (C)){I|L};[YQ]VTE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E;{[QV]|[N{I|L}]|[RA]|[KV]}YTE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ET{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;[VG]AYTE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ETVGC{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ET[Q{I|L}]M 4.8642;4.707;4.6654;4.6035;4.1717;4.1552;4.0624;4.054;3.9694;3.7768 -;-;-;-;-;-;-;-;-;- 3267 1 1.131 136571.0 1.0 12546 5755 18286 HBL1_DMSO_200M_050219_1,18303 HBL1_DMSO_200M_050219_1,18303,FFFDKTEEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18304 87.54 724.0 113340.0 25 0 21704.0 -1 0 74 1190.806115794776 3569.396517984528 3 1191.142871081829 MULTI CID FTMS 0 0 0 18286 235253.125 1.0 0 0.0 18 3 E 1 -1 7.8567 0.0 0.0 0.22011 0.0 0.0 3022.30986134566 415.0233579866268 3437.3332193322863 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 E 0.22011 - 46 + 1 1.131 67176.1 1.0 12547 5755 18286 HBL1_DMSO_200M_050219_1,18304 HBL1_DMSO_200M_050219_1,18304, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18305 87.544 229.0 510830.0 25 0 44619.0 + 42347 VTAVWGKNV 9 133 487.2770347421421 972.5395165510844 2 487.2772094607353 MULTI CID FTMS 0 0 0 18286 223222.953125 0.1113790910502169 -7 0.682159423828125 19 Unmodified _VTAVWGKNV_ ENSG00000177707|ENST00000485303|NECTIN3;nc|ENSG00000177707|Q9NQS3-2|NECTIN3;nc|ENSG00000177707|Q9NQS3-3|NECTIN3 36.12702656103203 0.0967173616627612 3 [{I|L}T]G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N 8 7 42.401 0.0 0.0 4.3598 0.0 0.0 0.0 114.05719168219676 114.05719168219676 24.52120824442108 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.5 0.0 [{I|L}T]G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N 4.3598 - 1366 1 1.131 89667.1 1.0 12548 5755 18286 HBL1_DMSO_200M_050219_1,18305 HBL1_DMSO_200M_050219_1,18305,VTAVWGKNV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18306 87.559 764.0 125490.0 25 0 21055.0 -1 0 76 1185.8171285817905 3554.4295563455707 3 1186.153857409954 MULTI CID FTMS 0 0 0 18286 212277.46875 0.9765154840047996 1 -0.1119155883789062 20 3 GC(Carbamidomethyl (C)) 2 -1 7.9588 0.0 0.0 0.22391 0.0 0.0 1255.423701013225 2078.9129122369745 3334.3366132502 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GC(Carbamidomethyl (C)) 0.22391 - 43 + 1 1.131 74072.2 1.0 12549 5755 18286 HBL1_DMSO_200M_050219_1,18306 HBL1_DMSO_200M_050219_1,18306, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18308 87.563 8.5 7398400.0 25 0 732680.0 + 37805 TLSPRTLQL 9 67 514.8087773478536 1027.6030017625071 2 514.8088867068291 MULTI CID FTMS 0 0 0 18307 7174072.5 1.0 0 0.0 1 Unmodified _TLSPRTLQL_ REV__ENST00000562941.1_1_16:29473130-29474884:+|nuORF 43.85829265575387 0.0542763391141878 3 {I|L}{I|L}TQ{I|L} 5 -1 50.191 0.0 0.0 4.8843 0.0 0.0 441.2340600883437 0.0 441.2340600883437 0.0 27.38728383729587 0.0 0.0 0 1.024227503252014 0.0 0.5 0.0 {I|L}{I|L}TQ{I|L} 4.8843 - 96 1 1.136 55517.8 1.0 12550 5756 18307 HBL1_DMSO_200M_050219_1,18308 HBL1_DMSO_200M_050219_1,18308,TLSPRTLQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18309 87.564 19.0 3089100.0 25 0 506840.0 18692 LAIWEASL 8 76 451.75254133747273 901.4905297417456 2 451.7528564333916 MULTI CID FTMS 0 0 0 18307 2953611.75 0.1265920159912647 25 -2.6024169921875 2 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 42.96799951952854 0.1846367511955703 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 3 50.679 0.0 0.0 5.6217 0.0 0.0 0.0 199.1070008284169 199.1070008284169 31.22826962470469 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 5.6217 - 229 1 1.136 52185.4 1.0 12551 5756 18307 HBL1_DMSO_200M_050219_1,18309 HBL1_DMSO_200M_050219_1,18309,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18310 87.565 18.0 3488400.0 25 0 423050.0 + 22561 LPWSNPLKV 9 79 527.3082810701694 1052.6020092071387 2 527.3085204958916 MULTI CID FTMS 0 0 0 18307 3017207.5 0.5476080909384353 -1 0.1119155883789062 3 Unmodified _LPWSNPLKV_ ENSG00000134077|ENST00000452837|THUMPD3 57.10758569107544 0.0276834916274374 3 {I|L}PWSNP{I|L}KV 9 0 + 73.421 0.0 0.0 6.9752 6.9752 90.723 0.0 0.0 0.0 34.25250945692483 9.331436695420976 9.331436695420976 9.208187539523747 0 1.579689690656103 2.0 0.0 0.0 + + {I|L}PWSNP{I|L}KV;{I|L}PWSGGP{I|L}KV 6.9752;6.1004 +;- + 427 + 1 1.136 56089.0 1.0 12552 5756 18307 HBL1_DMSO_200M_050219_1,18310 HBL1_DMSO_200M_050219_1,18310,LPWSNPLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18311 87.566 28.0 2046200.0 25 0 391150.0 + 2573 ASIDILHSI 9 77 484.773991919106 967.533430905012 2 484.7743713259697 MULTI CID FTMS 0 0 0 18307 1958792.75 1.0 0 0.0 4 Unmodified _ASIDILHSI_ ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11 71.13359017698441 0.0206607516130725 3 {[SA]|[TG]}{I|L}D{I|L}{I|L}HS{I|L} 9 0 + 73.915 0.0 0.0 7.6395 7.6395 80.586 0.0 0.0 0.0 24.13734275855269 0.1579426718323162 0.1579426718323162 0.1579426718323162 0 0.7059771852360797 1.6989700043360187 2.0356668758921828 0.0 + + {[SA]|[TG]}{I|L}D{I|L}{I|L}HS{I|L};{[SA]|[TG]}{I|L}D{I|L}{I|L}HTV;{[TV]|[{I|L}S]}H{I|L}[{M(Oxidation (M))|F}V][RP];[H{I|L}]S{I|L}[{M(Oxidation (M))|F}V][RP];[H{I|L}]{I|L}S[{M(Oxidation (M))|F}V][RP];[HS]{I|L}{I|L}[{M(Oxidation (M))|F}V][RP] 7.6395;7.6232;3.1121;2.7651;2.5831;1.1269 +;-;-;-;-;- + 355 + 1 1.136 54440.1 1.0 12553 5756 18307 HBL1_DMSO_200M_050219_1,18311 HBL1_DMSO_200M_050219_1,18311,ASIDILHSI True True ASIDILHSI 87.566446 484.77437132597 17556856.0 18307.0 ENSG00000108671|ENST00000261712|PSMD11;;nc|ENSG00000108671|O00231-2|PSMD11 1.764543096224467 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18312 87.568 26.0 2090300.0 25 0 352930.0 + 12437 GTVEQIVYL 9 84 511.2824319070769 0 511.2828857302666 PEAK CID FTMS 0 0 0 18307 1697165.375 0.2535871350763048 -3 0.3020477294921875 5 Unmodified _GTVEQIVYL_ ENSG00000182481|ENST00000330459|KPNA2 43.85829265575387 0.0484669621479465 3 V{I|L}CVY 5 6 17.263 0.0 0.0 1.6915 0.0 0.0 312.1679389100538 128.0721377008422 440.240076610896 0.0 0.0 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.0 V{I|L}CVY 1.6915 - 158 + 1 1.136 46676.4 1.0 12554 5756 18307 HBL1_DMSO_200M_050219_1,18312 HBL1_DMSO_200M_050219_1,18312,GTVEQIVYL True True GTVEQIVYL 87.567626 511.282885730267 132086312.0 18307.0 ENSG00000182481|ENST00000330459|KPNA2 2.1546409924825034 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18313 87.569 23.0 2972100.0 25 0 183650.0 + 24842 MPLLTPRYI 9 75 552.3177280993688 1102.6209032655374 2 552.3182250857353 MULTI CID FTMS 0 0 0 18307 1443988.375 0.5485635042397197 -3 0.3020477294921875 6 Unmodified _MPLLTPRYI_ ENSG00000117153|ENST00000367261|KLHL12;nc|ENSG00000117153|Q53G59-2|KLHL12 41.8396318013385 0.0653578398400075 3 MP{I|L}{I|L}T 5 4 66.74 0.0 0.0 6.0529 0.0 0.0 0.0 544.2892610832986 544.2892610832986 33.29689690656103 0.0 0.0 0.0 0 1.0994850021680094 1.3979400086720375 0.3807196863200844 0.0 + MP{I|L}{I|L}T 6.0529 + + 283 + 1 1.136 60258.3 1.0 12555 5756 18307 HBL1_DMSO_200M_050219_1,18313 HBL1_DMSO_200M_050219_1,18313,MPLLTPRYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18314 87.57 57.0 1637200.0 25 0 241780.0 + 22731 LQIPEKLEL 9 95 541.8261643904076 1081.637775847615 2 541.8263427615166 MULTI CID FTMS 0 0 0 18307 908920.8125 0.5629489341787077 -1 0.1119155883789062 7 Unmodified _LQIPEKLEL_ ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 32.78568957990786 0.1150597335874693 3 [Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}E 7 4 61.308 0.0 0.0 5.6681 0.0 0.0 0.0 222.12543665103752 222.12543665103752 42.09982639306755 0.0 0.0 0.0 0 0.9247425010840048 1.3010299956639813 1.1549471895720984 0.0 [Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}E 5.6681 - 343 + 1 1.136 75390.3 1.0 12556 5756 18307 HBL1_DMSO_200M_050219_1,18314 HBL1_DMSO_200M_050219_1,18314,LQIPEKLEL True True LQIPEKLEL 87.570255 541.826342761517 11739639.0 18307.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B;;nc|ENSG00000156970|O60566-2|BUB1B 3.1853369871775308 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18315 87.573 116.0 898630.0 25 0 159990.0 + 24514 MIPLIVLLSV 10 87 549.3557167932314 1096.6968806532627 2 549.3561889529228 MULTI CID FTMS 0 0 0 18307 561268.125 0.2953463923090336 2 -0.222381591796875 8 Unmodified _MIPLIVLLSV_ REV__ENSG00000180616|ENST00000357585|SSTR2;REV__nc|ENSG00000180616|P30874-2|SSTR2 34.10243960390752 0.2198439752719791 3 {I|L}{I|L}{I|L}SV 5 -1 49.24 0.0 0.0 4.4899 0.0 0.0 553.3343326051278 0.0 553.3343326051278 0.0 23.67127652447394 0.0 0.0 0 1.2302046884880935 0.0 0.5 0.0 {I|L}{I|L}{I|L}SV 4.4899 - 180 1 1.136 85379.8 1.0 12557 5756 18307 HBL1_DMSO_200M_050219_1,18315 HBL1_DMSO_200M_050219_1,18315,MIPLIVLLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18316 87.577 201.0 521390.0 25 0 68382.0 + 29281 QIESLHAETH 10 126 582.7853227646449 1163.5560925960897 2 582.7858154177666 MULTI CID FTMS 0 0 0 18307 508009.84375 0.0601628681203376 7 -0.7713699340820312 9 Unmodified _QIESLHAETH_ REV__ENSG00000170959|ENST00000684477|DCDC1;REV__nc|ENSG00000170959|M0R2J8|DCDC1 16.149105407346934 0.5765757077271437 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}{I|L}{I|L} 6 -1 52.981 0.0 0.0 4.5534 0.0 0.0 0.0 449.1515353967824 449.1515353967824 3.468123058888338 0.0 0.0 0.0 0 0.3807196863200844 0.744727494896694 0.958170666312956 0.9749073637206092 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}{I|L}{I|L} 4.5534 - 868 1 1.136 83731.0 1.0 12558 5756 18307 HBL1_DMSO_200M_050219_1,18316 HBL1_DMSO_200M_050219_1,18316,QIESLHAETH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18317 87.58 185.0 420530.0 25 0 47697.0 + 162 AALSKFIAV 9 108 460.2838245370672 918.5530961409344 2 460.2839843630791 MULTI CID FTMS 0 0 0 18307 351925.5 0.5394183509655353 2 -0.222381591796875 10 Unmodified _AALSKFIAV_ ENSG00000144730|ENST00000296318|IL17RD;ENST00000469841.5_1_3:57131519-57204269:-|nuORF;nc|ENSG00000144730|Q8NFM7-2|IL17RD;nc|ENSG00000144730|Q8NFM7-3|IL17RD;nc|ENSG00000144730|Q8NFM7-4|IL17RD 43.85829265575387 0.0542763391141878 3 [KS]{I|L}{M(Oxidation (M))|F}A{I|L}AAV 9 6 + 41.878 0.0 0.0 4.5591 4.5591 73.122 0.0 0.0 0.0 1.4579344798517295 2.963172653011654 1.4579344798517295 1.32068444291761 0 0.5994850021680094 0.0 1.0356668758921828 0.2215141619232908 [KS]{I|L}{M(Oxidation (M))|F}A{I|L}AAV;[KS]{I|L}{I|L}{M(Oxidation (M))|F}AAAV;{[TV]|[{I|L}S]}K{M(Oxidation (M))|F}A{I|L}AAV;{[TV]|[{I|L}S]}K{I|L}{M(Oxidation (M))|F}AAAV;AA{I|L}[YK]{I|L}AAV;[KS]{I|L}{M(Oxidation (M))|F}{I|L}AAAV;{[TV]|[{I|L}S]}K{M(Oxidation (M))|F}{I|L}AAAV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[K{I|L}]A{I|L}AAV;[{I|L}V][KT]{M(Oxidation (M))|F}AAAV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[K{I|L}]{I|L}AAAV 4.5591;4.4153;4.4004;4.2566;4.1972;3.7071;3.5484;2.6862;2.4562;1.8342 -;-;-;-;-;-;-;-;-;- 464 1 1.136 66722.0 1.0 12559 5756 18307 HBL1_DMSO_200M_050219_1,18317 HBL1_DMSO_200M_050219_1,18317,AALSKFIAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18318 87.583 121.0 738510.0 25 0 85550.0 + 38909 TVLEVREEL 9 101 544.3026284581586 1086.590703983117 2 544.3016235232353 MULTI CID FTMS 0 0 0 18307 348256.09375 0.6131137026534199 -1 0.1119155883789062 11 Unmodified _TVLEVREEL_ ENSG00000143515|ENST00000368489|ATP8B2;nc|ENSG00000143515|P98198-3|ATP8B2;nc|ENSG00000143515|P98198|ATP8B2 41.8396318013385 0.0653578398400075 3 {[QN]|[E{I|L}]|[KN]}[QT]{I|L}E{I|L}E{I|L} 9 6 + 58.746 0.0 0.0 5.4065 5.4065 74.165 0.0 0.0 0.0 0.3077146912995232 16.478174818886373 0.3077146912995232 0.3077146912995232 0 0.6861818737241735 1.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[QT]{I|L}E{I|L}E{I|L};{[TV]|[{I|L}S]}DR{I|L}E{I|L}E{I|L};{[TV]|[{I|L}S]}{I|L}V[DG]E{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[QT]{I|L}{I|L}EE{I|L};{[TV]|[{I|L}S]}DR{I|L}{I|L}EE{I|L};{[TV]|[{I|L}S]}{I|L}V[DG]{I|L}EE{I|L};{[TV]|[{I|L}S]}{I|L}[RD]E{I|L}E{I|L};[{I|L}T]VV[DG]E{I|L}E{I|L};{[TV]|[{I|L}S]}V{I|L}[DG]E{I|L}E{I|L};{[TV]|[{I|L}S]}{I|L}V[WD]{I|L}E{I|L} 5.4065;5.3781;5.1546;5.1294;5.1011;4.8776;4.8305;4.7586;4.6932;4.5535 -;-;-;-;-;-;-;-;-;- 1126 1 1.136 72707.9 1.0 12560 5756 18307 HBL1_DMSO_200M_050219_1,18318 HBL1_DMSO_200M_050219_1,18318,TVLEVREEL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18319 87.586 193.0 463030.0 25 0 40032.0 + -1 EPYLVLMCEYR 11 98 736.847031825712 1471.6795107182238 2 737.3458740115166 MULTI CID FTMS 0 0 0 18307 285192.90625 0.7542134036370975 1 -0.0872421264648437 12 Carbamidomethyl (C) _EPYLVLMC(Carbamidomethyl (C))EYR_ REV__ENSG00000153283|ENST00000352690|CD96;REV__nc|ENSG00000153283|P40200|CD96 8.745405648335112 0.8338865417133445 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}AY 6 -1 48.208 0.0 0.0 3.2757 0.0 0.0 0.0 732.31187090793 732.31187090793 24.33926250264676 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.6833245082789781 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}AY 3.2757 - 1726 1 1.136 66650.4 1.0 12561 5756 18307 HBL1_DMSO_200M_050219_1,18319 HBL1_DMSO_200M_050219_1,18319,EPYLVLMCEYR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18320 87.598 662.0 578470.0 25 0 38185.0 + + -1 RYYGESLPFGDNSF 14 145 826.3734399349188 1650.7323269366375 2 826.8759033083916 MULTI CID FTMS 0 0 0 18307 256188.03125 0.7394037430996718 -1 0.1119155883789062 13 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))REC(Carbamidomethyl (C))KLC(Carbamidomethyl (C))FRHW_ ENSG00000137509|ENST00000313010|PRCP;nc|ENSG00000137509|P42785-2|PRCP 0.0 0.8751479354844584 3 [{I|L}P]SP[C(Carbamidomethyl (C))N]S{I|L}P{M(Oxidation (M))|F}GDD 13 -1 62.834 0.0 0.0 3.8065 0.0 0.0 0.0 248.0792257005625 248.0792257005625 23.28471028462731 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.9634679910804403 0.0 [{I|L}P]SP[C(Carbamidomethyl (C))N]S{I|L}P{M(Oxidation (M))|F}GDD 3.8065 - 2795 1 1.136 257517.1 1.0 12562 5756 18307 HBL1_DMSO_200M_050219_1,18320 HBL1_DMSO_200M_050219_1,18320,CRECKLCFRHW False False RYYGESLPFGDNSF 87.597896 826.3749 3673911.0 18307.0 ENSG00000137509|ENST00000313010|PRCP;;nc|ENSG00000137509|P42785-2|PRCP 7.042472839355469 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18321 87.6 120.0 603620.0 25 0 81034.0 + 17345 KLYDGFQYL 9 120 573.7958639685511 1145.577175003902 2 573.7947875857353 MULTI CID FTMS 0 0 0 18307 297302.46875 0.9606248654534556 -1 0.1119155883789062 14 Unmodified _KLYDGFQYL_ ENSG00000143393|ENST00000368873|PI4KB;nc|ENSG00000143393|Q9UBF8-2|PI4KB;nc|ENSG00000143393|Q9UBF8-3|PI4KB 32.78568957990786 0.1150597335874693 3 {[TV]|[{I|L}S]}VNY{M(Oxidation (M))|F}QY{I|L} 9 4 + 60.133 0.0 0.0 5.2491 5.2491 74.966 0.0 0.0 0.0 1.0374943753836234 8.994672914934434 1.0374943753836234 1.0374943753836234 0 0.8494850021680094 0.8239087409443188 0.7302046884880937 0.4247425010840047 {[TV]|[{I|L}S]}VNY{M(Oxidation (M))|F}QY{I|L};[Y{I|L}]Q[TA]{M(Oxidation (M))|F}QY{I|L};{[TV]|[{I|L}S]}[YR]G{M(Oxidation (M))|F}QY{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[YR]WS{I|L};{[TV]|[{I|L}S]}V[YG]G{M(Oxidation (M))|F}QY{I|L};{[TV]|[{I|L}S]}VGGY{M(Oxidation (M))|F}QY{I|L};{[TV]|[{I|L}S]}VNY{M(Oxidation (M))|F}[AG]Y{I|L};[Y{I|L}][AG][TA]{M(Oxidation (M))|F}QY{I|L};[Y{I|L}]Q[TA]{M(Oxidation (M))|F}[AG]Y{I|L};[VS]{I|L}NY{M(Oxidation (M))|F}QY{I|L} 5.2491;5.1586;4.7081;4.464;4.4453;4.4453;4.4453;4.3548;4.3548;4.3256 -;-;-;-;-;-;-;-;-;- 1567 1 1.136 60616.5 1.0 12563 5756 18307 HBL1_DMSO_200M_050219_1,18321 HBL1_DMSO_200M_050219_1,18321,KLYDGFQYL True True KLYDGFQYL 87.600401 573.794787585735 3927625.5 18307.0 nc|ENSG00000143393|Q9UBF8-2|PI4KB;;ENSG00000143393|ENST00000368873|PI4KB;;nc|ENSG00000143393|Q9UBF8-3|PI4KB 4.888271967569987 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18322 87.612 673.0 337470.0 25 0 32644.0 + 15718 IQYIPTELDQV 11 160 659.8480286687201 1317.68150440424 2 659.8483154177666 MULTI CID FTMS 0 0 0 18307 243484.34375 0.0447745468101554 6 -0.6085739135742188 15 Unmodified _IQYIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 67.83816525789305 0.0386695545555003 3 [TP]E{I|L}DQV 7 4 51.642 0.0 0.0 3.9191 0.0 0.0 0.0 532.2750462345713 532.2750462345713 17.75398786251482 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.695629013946523 0.6139829889124311 + [TP]E{I|L}DQV 3.9191 + + 10073 1 1.136 166953.9 1.0 12564 5756 18307 HBL1_DMSO_200M_050219_1,18322 HBL1_DMSO_200M_050219_1,18322,IQYIPTELDQV True True IQYIPTELDQV 87.612126 659.848315417767 183233104.0 18307.0 ENSG00000149100|ENST00000531120|EIF3M 6.049070835113525 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18323 87.614 68.0 1065700.0 25 0 94847.0 + + 21736 IPYGMRFI 8 97 498.7708436967801 995.5271344603602 2 498.7708618044853 MULTI CID FTMS 0 0 0 18307 248764.25 0.5910622986298907 -2 0.1679916381835937 16 Unmodified _LPLWMHSL_ ENSG00000140575|ENST00000268182|IQGAP1 19.438996006549623 0.6237395211498085 3 {I|L}PY[{M(Oxidation (M))|F}V]MKV 8 -1 + 46.478 0.0 0.0 4.6687 4.6687 79.761 0.0 0.0 0.0 30.614208043450155 2.77366077466187 2.77366077466187 5.950980400142569 0 0.3807196863200844 1.3979400086720375 0.0 0.0 {I|L}PY[{M(Oxidation (M))|F}V]MKV;{I|L}PY{I|L}[YQ]S{I|L};{I|L}PY{I|L}[YQ]TV;{I|L}PY[RV][WY];[{I|L}P]{I|L}K[YT]{[{M(Oxidation (M))|F}D]|MM};{[CP]|[EA]}YKKMKV 4.6687;4.0709;4.0709;3.6153;2.3186;0.82165 -;-;-;-;-;- 274 + 1 1.136 59258.0 1.0 12565 5756 18307 HBL1_DMSO_200M_050219_1,18323 HBL1_DMSO_200M_050219_1,18323,LPLWMHSL False False IPYGMRFI 87.613734 498.770861804485 7536316.5 18307.0 ENSG00000140575|ENST00000268182|IQGAP1 1.6531377633412678 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18324 87.618 132.0 554070.0 25 0 48023.0 + 44410 YLYPDITRL 9 93 577.3168608832997 1152.6191688333993 2 577.3160278201103 MULTI CID FTMS 0 0 0 18307 241260.46875 1.0 0 0.0 17 Unmodified _YLYPDITRL_ ENSG00000131389|ENST00000622186|SLC6A6 23.78978130925829 0.2284941198415988 3 Y{I|L}YPD{I|L} 6 3 61.899 0.0 0.0 5.3703 0.0 0.0 0.0 385.2196749322876 385.2196749322876 46.44881394567784 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + Y{I|L}YPD{I|L} 5.3703 + + 97 + 1 1.136 59515.9 1.0 12566 5756 18307 HBL1_DMSO_200M_050219_1,18324 HBL1_DMSO_200M_050219_1,18324,YLYPDITRL False True YLYPDITRL 87.617598 577.31602782011 4756513.5 18307.0 ENSG00000131389|ENST00000622186|SLC6A6 3.8057898680369058 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18325 87.62 89.0 540530.0 25 0 81600.0 + 21054 LPAELINQI 9 90 505.79747336813 1009.58039380306 2 505.7981750369072 MULTI CID FTMS 0 0 0 18307 223934.375 0.0090761763395316 14 -1.4840469360351562 18 Unmodified _LPAELINQI_ ENSG00000160877|ENST00000292431|NACC1 16.942295170755138 0.3780752226737986 3 [{I|L}P]{[CP]|[EA]}{I|L}{I|L} 6 3 20.123 0.0 0.0 1.9932 0.0 0.0 0.0 370.17326424667255 370.17326424667255 3.262868911872154 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + [{I|L}P]{[CP]|[EA]}{I|L}{I|L} 1.9932 + + 89 1 1.136 43015.0 1.0 12567 5756 18307 HBL1_DMSO_200M_050219_1,18325 HBL1_DMSO_200M_050219_1,18325,LPAELINQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18326 87.633 746.0 236680.0 25 0 20709.0 + 36442 SYYPAENLIEY 11 179 681.3162193138011 1360.617885694402 2 681.3160888552666 MULTI CID FTMS 0 0 0 18307 195840.109375 0.5757783189294201 -3 0.3020477294921875 19 Unmodified _SYYPAENLIEY_ ENSG00000130024|ENST00000339209|PHF10;nc|ENSG00000130024|Q8WUB8-2|PHF10;nc|ENSG00000130024|Q8WUB8-3|PHF10 55.50274090549119 0.0873970505193986 3 [PA]EN{I|L}{I|L}E 7 4 48.66 0.0 0.0 3.5763 0.0 0.0 0.0 591.2098406106708 591.2098406106708 28.08681230323045 0.0 0.0 0.0 0 0.2887254899964357 0.6020599913279624 0.4698565171985375 1.6549471895720984 + [PA]EN{I|L}{I|L}E 3.5763 + + 5013 1 1.136 129856.7 1.0 12568 5756 18307 HBL1_DMSO_200M_050219_1,18326 HBL1_DMSO_200M_050219_1,18326,SYYPAENLIEY True True SYYPAENLIEY 87.632513 681.316088855267 10862749.0 18307.0 ENSG00000130024|ENST00000339209|PHF10;;nc|ENSG00000130024|Q8WUB8-2|PHF10;;nc|ENSG00000130024|Q8WUB8-3|PHF10 6.142255942026774 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18327 87.646 766.0 304760.0 25 0 16786.0 + 38658 TTINEIEDTF 10 230 591.7796762900282 1181.5447996468563 2 591.7791625857353 MULTI CID FTMS 0 0 0 18307 185584.171875 1.0 0 0.0 20 Unmodified _TTINEIEDTF_ ENSG00000128524|ENST00000249289|ATP6V1F;nc|ENSG00000128524|Q16864-2|ATP6V1F 24.99096001346401 0.4071966087057876 3 {[QN]|[E{I|L}]|[KN]}NE 4 7 20.679 0.0 0.0 1.7502 0.0 0.0 0.0 693.3073173072656 693.3073173072656 3.740984232451016 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}NE 1.7502 - 2212 1 1.136 174237.7 1.0 12569 5756 18307 HBL1_DMSO_200M_050219_1,18327 HBL1_DMSO_200M_050219_1,18327,TTINEIEDTF False True TTINEIEDTF 87.645782 591.779162585735 1593884.125 18307.0 nc|ENSG00000128524|Q16864-2|ATP6V1F;;ENSG00000128524|ENST00000249289|ATP6V1F 2.066327730814616 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18329 87.656 457.0 369100.0 25 0 40666.0 + -1 MFGLRFRKNMF 11 100 739.8712655564103 1477.7279781796203 2 739.8738891482353 MULTI CID FTMS 0 0 0 18328 234873.25 0.4018415988068274 2 -0.2004928588867187 1 2 Oxidation (M) _M(Oxidation (M))FGLRFRKNM(Oxidation (M))F_ REV__ENSG00000163394|ENST00000295589|CCKAR 13.90604991867851 0.7458848613461305 3 MY{I|L}GYEYVTA{I|L}R 12 -1 + 122.09 0.0 0.0 8.2621 8.2621 91.454 0.0 0.0 0.0 36.61181443446618 7.269987279362624 7.269987279362624 7.269987279362624 0 1.3494850021680094 2.0 0.805462187404089 0.5451140161145328 MY{I|L}GYEYVTA{I|L}R;MY{I|L}GYEYVTAR{I|L};MY{I|L}[WY]YVTA{I|L}R;MY{I|L}[WY]YVTAR{I|L};MY{I|L}[HT][C(Carbamidomethyl (C))N]VTA{I|L}R;MY{I|L}[HT][C(Carbamidomethyl (C))N]VTAR{I|L} 8.2621;7.7702;6.1747;5.6827;5.3532;4.8612 -;-;-;-;-;- 470 + 1 1.136 121942.9 1.0 12570 5757 18328 HBL1_DMSO_200M_050219_1,18329 HBL1_DMSO_200M_050219_1,18329,MFGLRFRKNMF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18330 87.657 30.0 2262200.0 25 0 303560.0 + 32201 RVVDLITNL 9 93 521.8159296941199 1041.6173064550396 2 521.8158447146416 MULTI CID FTMS 0 0 0 18328 1717313.0 0.6012947539591955 -2 0.19915771484375 2 Unmodified _RVVDLITNL_ ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 40.23920728925047 0.0741434193262949 3 D{I|L}{I|L}TN{I|L} 6 3 54.201 0.0 0.0 5.2035 0.0 0.0 354.23863417793126 0.0 354.23863417793126 0.0 40.70615965204567 0.0 0.0 0 1.2302046884880935 0.0 0.4247425010840047 0.0 + D{I|L}{I|L}TN{I|L} 5.2035 + + 518 1 1.136 59051.0 1.0 12571 5757 18328 HBL1_DMSO_200M_050219_1,18330 HBL1_DMSO_200M_050219_1,18330,RVVDLITNL True True RVVDLITNL 87.657213 521.815844714642 54728184.0 18328.0 ENSG00000086758|ENST00000262854|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 5.260924339294434 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18331 87.66 131.0 589770.0 25 0 73650.0 + 15429 IPPPVIMV 8 87 433.2642702046081 864.5139874760163 2 433.2647582888603 MULTI CID FTMS 0 0 0 18328 443690.59375 0.3932371819088449 11 -1.1675262451171875 3 Unmodified _IPPPVIMV_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 64.08090720244739 0.1161809961245979 3 [{I|L}P]VPP{I|L}MV 8 2 + 57.662 0.0 0.0 6.6698 6.6698 79.484 0.0 0.0 0.0 14.776296993281406 16.40978057358332 14.776296993281406 0.9691001300805624 0 1.110924374808178 1.3979400086720375 0.0 0.0 [{I|L}P]VPP{I|L}MV;[{I|L}P]PVP{I|L}MV;[{I|L}P]VP{I|L}PMV;[{I|L}P]PV{I|L}PMV;[{I|L}P]VPPM{I|L}V;[{I|L}P]PVPM{I|L}V;[VP]PP{I|L}{I|L}MV;{[HG]|PP}VP{I|L}{I|L}MV;[VP]P{I|L}P{I|L}MV;[VP]{I|L}PP{I|L}MV 6.6698;6.5577;5.9734;5.8613;5.6776;5.5655;4.9606;4.8161;4.4087;4.4087 -;-;-;-;-;-;-;-;-;- 226 1 1.136 71632.7 1.0 12572 5757 18328 HBL1_DMSO_200M_050219_1,18331 HBL1_DMSO_200M_050219_1,18331,IPPPVIMV True True IPPPVIMV 87.659879 433.26475828886 62127192.0 18328.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2 5.848428726196289 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18332 87.663 139.0 606030.0 25 0 44527.0 + -1 SVCVCVCLCL 10 130 578.2561518468154 1154.4977507604308 2 578.2559081912041 MULTI CID FTMS 0 0 0 18328 266856.0 0.5898835097445471 -1 0.0872421264648437 4 2 Carbamidomethyl (C) _SVC(Carbamidomethyl (C))VC(Carbamidomethyl (C))VCLCL_ REV__ENST00000519868.1_1_5:169507112-169507319:+|nuORF 11.640296217721598 0.652229146672156 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[HA]E{M(Oxidation (M))|F}E 8 -1 27.378 0.0 0.0 2.3715 0.0 0.0 0.0 207.11483179263908 207.11483179263908 12.769542486015464 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[HA]E{M(Oxidation (M))|F}E 2.3715 - 320 + 1 1.136 71177.0 1.0 12573 5757 18328 HBL1_DMSO_200M_050219_1,18332 HBL1_DMSO_200M_050219_1,18332,SVCVCVCLCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18333 87.675 680.0 246540.0 25 0 18086.0 4662 DAYVLPKLYV 10 179 590.8353801984233 1179.6562074636463 2 590.8350097537041 MULTI CID FTMS 0 0 0 18328 211082.59375 1.0 0 0.0 5 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 21.53697664764585 0.484802182336468 3 [{I|L}V]WY 4 7 35.49 0.0 0.0 3.0085 0.0 0.0 0.0 615.3511446588499 615.3511446588499 -2.8174312876055296 0.0 -2.8174312876055296 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [{I|L}V]WY 3.0085 - 2975 + 1 1.136 124759.9 1.0 12574 5757 18328 HBL1_DMSO_200M_050219_1,18333 HBL1_DMSO_200M_050219_1,18333,DAYVLPKLYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18334 87.686 638.0 240880.0 25 0 12108.0 + 28885 QAMGSFLSV 9 132 939.4616222840904 938.4543458174904 1 939.4626953005792 MULTI CID FTMS 0 0 0 18328 219507.0 1.0 0 0.0 6 Unmodified _QAMGSFLSV_ ENSG00000002549|ENST00000226299|LAP3;ENST00000503467.1_1_4:17587853-17609209:+|nuORF;nc|ENSG00000002549|P28838-2|LAP3 122.17920374332846 0.0007092405233684 3 [QA]MGS{M(Oxidation (M))|F}{I|L}SV 9 0 + 89.587 0.0 0.0 9.5463 9.5463 96.76 0.0 0.0 0.0 13.562953441510146 14.973024840566469 13.562953441510146 13.562953441510146 0 1.1705363776671327 0.619788758288394 1.4049471895720984 2.4604093769761874 + + [QA]MGS{M(Oxidation (M))|F}{I|L}SV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}NS{M(Oxidation (M))|F}{I|L}SV;{[QV]|[N{I|L}]|[RA]|[KV]}CGS{M(Oxidation (M))|F}{I|L}SV;{[QV]|[N{I|L}]|[RA]|[KV]}C(Carbamidomethyl (C))S{M(Oxidation (M))|F}{I|L}SV;[VS][C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}{I|L}SV;[QA]MYQ{I|L}SV;[VS]G{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}{I|L}SV;{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))N]{M(Oxidation (M))|F}{I|L}SV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}GGS{M(Oxidation (M))|F}{I|L}SV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}GYQ{I|L}SV 9.5463;8.101;7.651;6.8288;6.651;6.5517;6.4679;6.4422;6.3014;6.0198 +;-;-;-;-;-;-;-;-;- + 3274 1 1.136 101311.5 1.0 12575 5757 18328 HBL1_DMSO_200M_050219_1,18334 HBL1_DMSO_200M_050219_1,18334,QAMGSFLSV True True QAMGSFLSV 87.685675 939.462695300579 1076511.375 18328.0 ENSG00000002549|ENST00000226299|LAP3;;nc|ENSG00000002549|P28838-2|LAP3;;ENST00000503467.1_1_4:17587853-17609209:+|nuORF 6.298923015594482 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18335 87.689 155.0 475580.0 25 0 38208.0 -1 ITQMCFFL 8 98 530.2555770264377 1058.4966011196752 2 530.2552978396416 MULTI CID FTMS 0 0 0 18328 210531.5 0.2888744740063879 -1 0.0872421264648437 7 Carbamidomethyl (C) _ITQMC(Carbamidomethyl (C))FFL_ ENSG00000127515|ENST00000641129|OR7A10 16.942295170755138 0.6606234159769251 3 {I|L}Y 2 -1 20.969 0.0 0.0 1.981 0.0 0.0 0.0 779.326901345369 779.326901345369 3.2048902867916595 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y 1.981 - 47 + 1 1.136 64738.3 1.0 12576 5757 18328 HBL1_DMSO_200M_050219_1,18335 HBL1_DMSO_200M_050219_1,18335,ITQMCFFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18336 87.7 667.0 259240.0 25 0 44490.0 + 43685 YAWPTAEI 8 133 950.4613670738546 949.4540906072546 1 950.4608032107352 MULTI CID FTMS 0 0 0 18328 200685.234375 0.8831787615526574 1 -0.1351394653320312 8 Unmodified _YAWPTAEI_ ENSG00000114054|ENST00000251654|PCCB;ENST00000473073.1_1_3:136045962-136048865:+|nuORF;nc|ENSG00000114054|P05166-2|PCCB 106.8454739257335 0.061725950463852 3 [TP]AEYAGE{I|L} 9 6 + 76.537 0.0 0.0 8.0611 8.0611 94.038 0.0 0.0 0.0 19.61813275393608 16.478174818886387 16.478174818886387 9.462724883926668 0 0.2742275032520141 0.958607314841775 2.163529196767072 0.0 [TP]AEYAGE{I|L};[TP]AEYAW{I|L};[TP]AT{M(Oxidation (M))|F}TAE{I|L};[TP]AYEAGE{I|L};[TP]AWYAE{I|L};[TP]AEWS{M(Oxidation (M))|F}{I|L};[TP]AYWAE{I|L};[TP]AW{M(Oxidation (M))|F}{I|L}C{I|L};[TP]AE{I|L}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L};[EP][TA]YAGE{I|L} 8.0611;7.0645;6.7373;6.7344;6.6057;6.4212;6.4202;6.2387;6.2357;5.9949 -;-;-;-;-;-;-;-;-;- 7339 1 1.136 116228.8 1.0 12577 5757 18328 HBL1_DMSO_200M_050219_1,18336 HBL1_DMSO_200M_050219_1,18336,YAWPTAEI True True YAWPTAEI 87.700398 950.460803210735 2057221.875 18328.0 nc|ENSG00000114054|P05166-2|PCCB;;ENSG00000114054|ENST00000251654|PCCB;;ENST00000473073.1_1_3:136045962-136048865:+|nuORF 5.664549986521403 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18337 87.713 709.0 96880.0 25 0 5632.6 -1 0 91 796.7056505359423 2387.0951222080266 3 797.0399658083916 MULTI CID FTMS 0 0 0 18328 164724.703125 0.7737468847024496 11 -1.1675262451171875 9 3 {[HG]|PP}APPPPP 8 -1 21.579 0.0 0.0 0.904 0.0 0.0 0.0 1633.6644658581406 1633.6644658581406 -3.786947273701742 0.0 -3.786947273701742 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}APPPPP 0.904 - 1388 1 1.136 54671.9 1.0 12578 5757 18328 HBL1_DMSO_200M_050219_1,18337 HBL1_DMSO_200M_050219_1,18337, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18338 87.719 267.0 285050.0 25 0 25473.0 + 45070 YPYHLSDIMV 10 104 619.2995229229734 1236.5844929127468 2 619.3002807497978 MULTI CID FTMS 0 0 0 18328 171130.125 0.2812983306502235 -3 0.2552337646484375 10 Unmodified _YPYHLSDIMV_ ENSG00000176853|ENST00000334705|FAM91A1;ENST00000454544.2_1_1:147907560-147907839:+|nuORF 42.09456458481378 0.1354489350322421 3 [{I|L}T][WC(Carbamidomethyl (C))]{I|L}{[DS]|[MA]|[CV]|TT}{I|L}MV 10 4 + 50.207 0.0 0.0 4.0601 4.0601 69.747 0.0 0.0 0.0 0.2802872360024366 14.08748409920328 0.2802872360024366 0.2802872360024366 0 0.5 2.0 0.7302046884880937 0.0 [{I|L}T][WC(Carbamidomethyl (C))]{I|L}{[DS]|[MA]|[CV]|TT}{I|L}MV;{[TV]|[{I|L}S]}[HD]YPY{I|L}MV;[H{I|L}]{M(Oxidation (M))|F}Y{I|L}{[DS]|[MA]|[CV]|TT}{I|L}MV;{[TV]|[{I|L}S]}[HD]YP{I|L}YMV;[H{I|L}]{M(Oxidation (M))|F}{I|L}Y{[DS]|[MA]|[CV]|TT}{I|L}MV;{[TV]|[{I|L}S]}[HD]Y{I|L}{M(Oxidation (M))|F}{I|L}MV;[{I|L}T][WC(Carbamidomethyl (C))][HK]YMV;{[TV]|[{I|L}S]}[HD]Y{I|L}PYMV;[{M(Oxidation (M))|F}T]YVY{[DS]|[MA]|[CV]|TT}{I|L}MV;[{M(Oxidation (M))|F}T]{I|L}{[DS]|[MA]|[CV]|TT}YVYMV 4.0601;4.0375;3.9364;3.794;3.693;3.5506;3.5319;3.3072;3.0034;2.9209 -;-;-;-;-;-;-;-;-;- 1676 1 1.136 57188.1 1.0 12579 5757 18328 HBL1_DMSO_200M_050219_1,18338 HBL1_DMSO_200M_050219_1,18338,YPYHLSDIMV False True YPYHLSDIMV 87.718844 619.300280749798 15197540.0 18328.0 ENST00000454544.2_1_1:147907560-147907839:+|nuORF;;ENSG00000176853|ENST00000334705|FAM91A1 5.732147057851155 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18339 87.731 670.0 531440.0 25 0 24943.0 -1 0 198 973.9729449418528 1945.9313369505053 2 973.9758178591728 MULTI CID FTMS 0 0 0 18328 145429.265625 0.1326942955216247 -3 0.2552337646484375 11 3 [MN]PN{I|L}NEA{M(Oxidation (M))|F}MPV{I|L}{M(Oxidation (M))|F}S 15 -1 90.062 0.0 0.0 4.6282 0.0 0.0 0.0 238.1200350397094 238.1200350397094 0.8924229536520585 0.0 0.0 0.0 0 1.5189301784845295 1.6989700043360187 1.3895840698003 0.7302046884880937 [MN]PN{I|L}NEA{M(Oxidation (M))|F}MPV{I|L}{M(Oxidation (M))|F}S 4.6282 - 354964 + 1 1.136 226738.7 1.0 12580 5757 18328 HBL1_DMSO_200M_050219_1,18339 HBL1_DMSO_200M_050219_1,18339, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18340 87.742 666.0 258690.0 25 0 18870.0 -1 0 102 889.6149382007278 3554.430646936511 4 890.1142455935478 MULTI CID FTMS 0 0 0 18328 107003.4453125 0.6038015436648727 1 -0.1351394653320312 12 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VTGYV 8 -1 44.93 0.0 0.0 1.2641 0.0 0.0 0.0 2661.961185472951 2661.961185472951 23.56865597838884 0.0 0.0 0.0 0 0.0 0.0 2.048455006504028 0.8149093276264391 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VTGYV 1.2641 - 3214 1 1.136 121944.5 1.0 12581 5757 18328 HBL1_DMSO_200M_050219_1,18340 HBL1_DMSO_200M_050219_1,18340, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18341 87.748 315.0 324970.0 25 0 29924.0 + 27704 PLLAKKPSV 9 138 476.81188369741983 0 476.8119384646416 PEAK CID FTMS 0 0 0 -1 0 13 Unmodified _PLLAKKPSV_ REV__ENSG00000198399|ENST00000355123|ITSN2;REV__nc|ENSG00000198399|Q9NZM3-2|ITSN2;REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2;REV__nc|ENSG00000198399|Q9NZM3-4|ITSN2 19.438996006549623 0.2061572778002301 3 {I|L}NV{I|L} 4 -1 15.918 0.0 0.0 1.6727 0.0 0.0 302.19168624073967 207.11440454654533 509.306090787285 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}NV{I|L} 1.6727 - 315 + 1 1.136 80898.0 1.0 12582 5757 18328 HBL1_DMSO_200M_050219_1,18341 HBL1_DMSO_200M_050219_1,18341,PLLAKKPSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18342 87.762 737.0 279610.0 25 0 23142.0 + 24509 MIPDNELHLI 10 168 597.8153318036752 1193.6161106741504 2 597.8148681521416 MULTI CID FTMS 0 0 0 18328 143853.4375 0.7230910397963104 3 -0.3852005004882812 14 Unmodified _MIPDNELHLI_ ENSG00000150627|ENST00000508596|WDR17;nc|ENSG00000150627|Q8IZU2|WDR17 29.081581746732265 0.3152867722954398 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P 3 7 27.007 0.0 0.0 2.2626 0.0 0.0 0.0 849.4131563775999 849.4131563775999 1.62331468813235 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P 2.2626 + + 1438 + 1 1.136 157809.9 1.0 12583 5757 18328 HBL1_DMSO_200M_050219_1,18342 HBL1_DMSO_200M_050219_1,18342,MIPDNELHLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18343 87.767 292.0 198210.0 25 0 43673.0 + 41611 VPPLVLVYPIW 11 78 648.3932180704345 1294.771883207669 2 648.8952514529228 MULTI CID FTMS 0 0 0 18328 123932.8515625 0.3677585545786312 -2 0.19915771484375 15 Unmodified _VPPLVLVYPIW_ REV__ENST00000466602.1_1_2:219677084-219677513:+|nuORF 1.4819007175156935 0.86815623132643 3 {I|L} 1 -1 10.837 0.0 0.0 0.83702 0.0 0.0 1163.6769410463392 0.0 1163.6769410463392 0.0 8.84775539310863 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.83702 + + 12 + 1 1.136 62584.0 1.0 12584 5757 18328 HBL1_DMSO_200M_050219_1,18343 HBL1_DMSO_200M_050219_1,18343,VPPLVLVYPIW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18344 87.781 800.0 435040.0 25 0 26355.0 + 38926 TVLRVDQIIMA 11 176 629.8625891304102 1257.7106253276204 2 629.8630248904228 MULTI CID FTMS 0 0 0 18328 109419.109375 0.2629895050151785 -2 0.19915771484375 16 Unmodified _TVLRVDQIIMA_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 34.221707139014875 0.3014076866608453 3 {NN|[MP]|[D{I|L}]|[EV]}VA[{I|L}V]NS{I|L}{I|L}CV 12 8 + 54.255 0.0 0.0 4.3138 4.3138 53.43 0.0 0.0 0.0 5.052268430629688 8.517033029090634 5.052268430629688 0.0 0 0.9322333069283656 1.5228787452803376 0.4698565171985375 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}VA[{I|L}V]NS{I|L}{I|L}CV;{NN|[MP]|[D{I|L}]|[EV]}VV[{I|L}A]NS{I|L}{I|L}CV;{NN|[MP]|[D{I|L}]|[EV]}VQ{I|L}RS{I|L}{I|L}CV;{NN|[MP]|[D{I|L}]|[EV]}VAG{I|L}RS{I|L}{I|L}CV;{[TV]|[{I|L}S]}{I|L}K{[QN]|[E{I|L}]|[KN]}Q{I|L}{I|L}CV;{[TV]|[{I|L}S]}{I|L}R[DV]Q{I|L}{I|L}CV;{NN|[MP]|[D{I|L}]|[EV]}VVWAK{I|L}{I|L}CV;{NN|[MP]|[D{I|L}]|[EV]}VA[{I|L}V]GGS{I|L}{I|L}CV;{NN|[MP]|[D{I|L}]|[EV]}VV[{I|L}A]GGS{I|L}{I|L}CV;{NN|[MP]|[D{I|L}]|[EV]}VQ{I|L}[VG]S{I|L}{I|L}CV 4.3138;4.3138;4.2883;4.0552;3.9121;3.8253;3.6041;3.5904;3.5904;3.5625 -;-;-;-;-;-;-;-;-;- 4290 1 1.136 264896.3 0.8600000143051147 12585 5757 18328 HBL1_DMSO_200M_050219_1,18344 HBL1_DMSO_200M_050219_1,18344,TVLRVDQIIMA False True TVLRVDQIIMA 87.781056 629.863024890423 4123243.0 18328.0 nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 4.793292840321858 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18346 87.785 29.0 2540300.0 25 0 703660.0 -1 0 41 1173.1676245175986 3516.481044152996 3 1173.503100574017 MULTI CID FTMS 0 0 0 18345 3231189.0 0.1500880409263499 3 -0.3437652587890625 1 3 YC 2 -1 7.9588 0.0 0.0 0.22633 0.0 0.0 2001.6970858658 1245.6559542291627 3247.353040094962 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YC 0.22633 - 38 + 1 1.147 73221.9 1.0 12586 5758 18345 HBL1_DMSO_200M_050219_1,18346 HBL1_DMSO_200M_050219_1,18346, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18347 87.787 7.5 3436300.0 25 0 298810.0 -1 0 61 494.3085186139824 493.3012421473824 1 494.3082153201103 MULTI CID FTMS 0 0 0 18345 2893169.0 0.0857691678297547 4 -0.3861923217773437 2 3 [VS]{I|L}K 4 -1 28.416 0.0 0.0 5.7605 0.0 0.0 0.0 62.99750614568243 62.99750614568243 12.931825014007217 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VS]{I|L}K 5.7605 - 31 1 1.147 24672.6 1.0 12587 5758 18345 HBL1_DMSO_200M_050219_1,18347 HBL1_DMSO_200M_050219_1,18347, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18348 87.788 8.2 4356100.0 25 0 503220.0 + 17916 KQVEEIFNL 9 68 560.3056738747159 1118.5967948162315 2 560.3054687380791 MULTI CID FTMS 0 0 0 18345 3779201.0 0.8142386148122573 -1 0.1351394653320312 3 Unmodified _KQVEEIFNL_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 32.78568957990786 0.1150597335874693 3 {NN|[MP]|[D{I|L}]|[EV]}[KQ]E{I|L}{M(Oxidation (M))|F}N{I|L} 9 4 + 42.425 0.0 0.0 3.7927 3.7927 79.14 0.0 0.0 0.0 3.9203653217685286 27.821290465856308 3.9203653217685286 8.066884185923655 0 0.6989700043360187 0.0 0.8494850021680094 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}[KQ]E{I|L}{M(Oxidation (M))|F}N{I|L};[KA][VG]EE{I|L}{M(Oxidation (M))|F}N{I|L} 3.7927;3.0716 -;- 84 1 1.147 32429.0 1.0 12588 5758 18345 HBL1_DMSO_200M_050219_1,18348 HBL1_DMSO_200M_050219_1,18348,KQVEEIFNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18349 87.789 11.0 3468500.0 25 0 272100.0 + 17328 KLVGEFLEV 9 65 517.3004782879307 1032.5864036426613 2 517.3001586794853 MULTI CID FTMS 0 0 0 18345 3256580.0 0.7923844394750804 -1 0.1351394653320312 4 Unmodified _KLVGEFLEV_ ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1 16.149105407346934 0.3995459350917656 3 {[QN]|[E{I|L}]|[KN]}RK{M(Oxidation (M))|F}{I|L}EV 8 4 + 44.162 0.0 0.0 4.2768 4.2768 77.058 0.0 0.0 0.0 4.490925311194182 10.389180660303694 4.490925311194182 4.490925311194182 0 0.0 0.0 0.3807196863200844 0.0 {[QN]|[E{I|L}]|[KN]}RK{M(Oxidation (M))|F}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}K{M(Oxidation (M))|F}{I|L}EV;{[QN]|[E{I|L}]|[KN]}R{M(Oxidation (M))|F}K{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DG]{I|L}K{I|L}EV;{[QN]|[E{I|L}]|[KN]}[VG]K{M(Oxidation (M))|F}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}K{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[DA]|[EG]}VK{I|L}EV;{[QN]|[E{I|L}]|[KN]}[VG]{M(Oxidation (M))|F}K{I|L}EV;{[QN]|[E{I|L}]|[KN]}RKE{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}KE{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V 4.2768;3.8419;3.8147;3.5008;3.3798;3.3798;3.2093;2.9178;1.9217;1.4868 -;-;-;-;-;-;-;-;-;- 139 1 1.147 36082.6 1.0 12589 5758 18345 HBL1_DMSO_200M_050219_1,18349 HBL1_DMSO_200M_050219_1,18349,KLVGEFLEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18350 87.79 31.0 2055800.0 25 0 173320.0 + 44843 YPPAPFMHI 9 85 536.767818970596 1071.5210850079918 2 536.7682372927666 MULTI CID FTMS 0 0 0 18345 1576253.125 0.2492731557104512 -3 0.3342971801757812 5 Unmodified _YPPAPFMHI_ ENSG00000143569|ENST00000428931|UBAP2L;ENST00000484819.1_1_1:154238957-154241481:+|nuORF;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 36.46614268402704 0.0948557732959553 3 YPPA{I|L}MMH{I|L} 9 2 + 71.609 0.0 0.0 6.6829 6.6829 92.493 0.0 0.0 0.0 50.67455234239091 7.420299789533402 7.420299789533402 17.448500216800937 0 0.3807196863200844 2.0 0.0 0.0 YPPA{I|L}MMH{I|L};YPPA[KC][SG]H{I|L};YP{I|L}[PA]MMH{I|L};YP{I|L}[DV]{[ES]|[DT]|[{I|L}C]}H{I|L};YP{I|L}{[QC]|[C(Carbamidomethyl (C))A]}[QA]H{I|L};[PA][KC]M{I|L}AP{[QN]|[E{I|L}]|[KN]};YP{I|L}[C(Carbamidomethyl (C))H][RN]{I|L};[PA]P{M(Oxidation (M))|F}[KC]AP{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]QAP{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MH[VS]{I|L}{[QN]|[E{I|L}]|[KN]} 6.6829;5.0545;4.8426;4.2568;3.745;3.2405;2.9761;2.6786;2.5314;2.1988 -;-;-;-;-;-;-;-;-;- 322 + 1 1.147 59282.7 1.0 12590 5758 18345 HBL1_DMSO_200M_050219_1,18350 HBL1_DMSO_200M_050219_1,18350,YPPAPFMHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18351 87.791 20.0 2541000.0 25 0 182490.0 + 13942 HYITPMMEL 9 78 567.7698787119199 1133.5252044906397 2 567.7682983279228 MULTI CID FTMS 0 0 0 18345 1623503.5 0.5744642097803604 -2 0.222381591796875 6 Unmodified _HYITPMMEL_ ENSG00000099901|ENST00000430524|RANBP1;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1 60.38955033654506 0.025866396858536 3 {[WN]|[YH]}{I|L}T{NN|[MP]|[D{I|L}]|[EV]}ME{I|L} 9 0 + 66.806 0.0 0.0 5.8936 5.8936 90.879 0.0 0.0 0.0 21.12704280191288 41.93550152785134 21.12704280191288 26.80523450795789 0 0.2887254899964357 1.3979400086720375 0.805462187404089 0.0 + + {[WN]|[YH]}{I|L}T{NN|[MP]|[D{I|L}]|[EV]}ME{I|L};{[WN]|[YH]}[VP][{M(Oxidation (M))|F}V]ME{I|L};{[WN]|[YH]}[VP]{[ET]|[MV]}{M(Oxidation (M))|F}E{I|L};{[WN]|[YH]}[VP]PM{[YD]|[{M(Oxidation (M))|F}M]}{I|L};{[WN]|[YH]}[RH]M{[YD]|[{M(Oxidation (M))|F}M]}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[RD]{NN|[MP]|[D{I|L}]|[EV]}ME{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}P{[CA]|SS}{NN|[MP]|[D{I|L}]|[EV]}ME{I|L};[VP]{[WN]|[YH]}[{M(Oxidation (M))|F}V]ME{I|L};[VP]{[WN]|[YH]}{[ET]|[MV]}{M(Oxidation (M))|F}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[RD][DP]{M(Oxidation (M))|F}E{I|L} 5.8936;3.5288;3.2633;2.8532;2.5473;2.353;2.2428;2.03;1.7644;1.7516 +;-;-;-;-;-;-;-;-;- + 227 1 1.147 46356.2 1.0 12591 5758 18345 HBL1_DMSO_200M_050219_1,18351 HBL1_DMSO_200M_050219_1,18351,HYITPMMEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18352 87.792 16.0 3039500.0 25 0 500690.0 11485 GIIPRVIQL 9 55 504.83188664626135 1007.6492203593228 2 504.8321411013603 MULTI CID FTMS 0 0 0 18345 1496065.5 0.027813885288363 -4 0.3903732299804687 7 Unmodified _GIIPRVIQL_ ENSG00000226650|ENST00000435029|KIF4B 50.855029805455786 0.0384952370514206 3 {[VA]|[{I|L}G]}{I|L} 3 6 35.062 0.0 0.0 3.4796 0.0 0.0 0.0 721.4363962228571 721.4363962228571 10.72559982972642 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {[VA]|[{I|L}G]}{I|L} 3.4796 + + 57 1 1.147 44074.1 1.0 12592 5758 18345 HBL1_DMSO_200M_050219_1,18352 HBL1_DMSO_200M_050219_1,18352,GIIPRVIQL True True AVIPRLVQL 87.792397 504.83214110136 1592643328.0 18345.0 ENSG00000173801|ENST00000393931|JUP;;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 4.151485125223796 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18353 87.794 36.0 2312300.0 25 0 137510.0 -1 0 91 966.9643222406994 1931.9140915481987 2 967.4664794802666 MULTI CID FTMS 0 0 0 18345 1173304.875 0.4005067585874728 -2 0.222381591796875 8 3 {[TV]|[{I|L}S]}EVPV[EP][DP]WN{I|L}DP[EP] 17 -1 + 64.374 0.0 0.0 3.3321 3.3321 75.162 0.0 0.0 0.0 4.841034555602505 5.8549088989476985 4.841034555602505 4.841034555602505 0 0.6307196863200843 0.958607314841775 1.066901560044258 0.3494850021680094 {[TV]|[{I|L}S]}EVPV[EP][DP]WN{I|L}DP[EP];[NP]{I|L}NWERN[QP]N{I|L}DP[EP];[NP]{I|L}NWERN{[CT]|[{M(Oxidation (M))|F}G]}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NWERN{[CT]|[{M(Oxidation (M))|F}G]}{I|L}KSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[EP]VVTV[EP][DP]WN{I|L}DP[EP];[NP]{I|L}NM{[TV]|[{I|L}S]}[RH]WN{I|L}D[WH];{[QV]|[N{I|L}]|[RA]|[KV]}PNWERN[QP]N{I|L}DP[EP];[MN]PN{I|L}{[TV]|[{I|L}S]}[RH]WN{I|L}D[WH];{[QV]|[N{I|L}]|[RA]|[KV]}PNWERN{[CT]|[{M(Oxidation (M))|F}G]}{I|L}KSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QV]|[N{I|L}]|[RA]|[KV]}PNWERN{[CT]|[{M(Oxidation (M))|F}G]}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.3321;3.0815;2.5329;2.5329;2.2952;2.1143;2.0012;1.5465;1.4526;1.4526 -;-;-;-;-;-;-;-;-;- 968 1 1.147 59308.6 1.0 12593 5758 18345 HBL1_DMSO_200M_050219_1,18353 HBL1_DMSO_200M_050219_1,18353, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18354 87.795 78.0 1089800.0 25 0 190350.0 + 18661 HALPIPVI 8 80 430.2738263144236 858.5330996956471 2 430.2734863162041 MULTI CID FTMS 0 0 0 18345 678656.9375 0.817837554887739 1 -0.0653533935546875 9 Unmodified _LAHPLPVL_ ENSG00000136628|ENST00000366923|EPRS1 32.45364647766026 0.3613649037604678 3 [{I|L}A]HP{I|L} 5 3 26.269 0.0 0.0 3.0597 0.0 0.0 0.0 324.1929777917929 324.1929777917929 12.289110709621587 0.0 0.0 0.0 0 0.3494850021680094 1.0969100130080565 0.0 0.0 + [{I|L}A]HP{I|L} 3.0597 + + 48 1 1.147 74108.5 1.0 12594 5758 18345 HBL1_DMSO_200M_050219_1,18354 HBL1_DMSO_200M_050219_1,18354,LAHPLPVL False True HALPIPVI 87.795393 430.273486316204 20029070.0 18345.0 ENSG00000136628|ENST00000366923|EPRS1 5.382640679677327 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18355 87.797 76.0 929230.0 25 0 79256.0 + 1185 AIAPIIAAV 9 90 419.7734699949407 837.5323870566814 2 419.7734252810478 MULTI CID FTMS 0 0 0 18345 615430.75 0.5543097194915494 1 -0.0653533935546875 10 Unmodified _AIAPIIAAV_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 36.46614268402704 0.0948557732959553 3 [{I|L}A]P{I|L}A{I|L}Q{I|L} 8 5 + 41.686 0.0 0.0 4.9773 4.9773 73.089 0.0 0.0 0.0 0.5115252244738144 5.310996543144107 0.5115252244738144 0.5115252244738144 0 0.1331596456423734 1.6989700043360187 0.0 0.0 [{I|L}A]P{I|L}A{I|L}Q{I|L};[{I|L}P]{I|L}AA{I|L}Q{I|L};[{I|L}P]A{I|L}A{I|L}Q{I|L};[{I|L}A]PA{I|L}{I|L}Q{I|L};[{I|L}A]AP{I|L}{I|L}Q{I|L};[{I|L}P]AA{I|L}{I|L}Q{I|L};AA{I|L}P{I|L}{I|L}Q{I|L};[PA]{I|L}{I|L}A{I|L}Q{I|L};[PA]{I|L}A{I|L}{I|L}Q{I|L} 4.9773;4.9162;4.5568;4.4076;4.1973;3.9871;2.9088;2.1984;1.6288 -;-;-;-;-;-;-;-;- 241 1 1.147 59108.2 1.0 12595 5758 18345 HBL1_DMSO_200M_050219_1,18355 HBL1_DMSO_200M_050219_1,18355,AIAPIIAAV True True AIAPIIAAV 87.797139 419.773425281048 21621280.0 18345.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2 3.0391461849212646 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18356 87.799 71.0 997460.0 25 0 94951.0 + 18489 KYNIMLVRL 9 88 575.3441928266012 1148.6738327200023 2 575.3445922732353 MULTI CID FTMS 0 0 0 18345 522692.4375 0.2107154562446672 -2 0.222381591796875 11 Unmodified _KYNIMLVRL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 21.59015148037692 0.2564810811560323 3 KYN{I|L}M{I|L}VR{I|L} 9 0 + 55.882 0.0 0.0 4.8649 4.8649 76.86 0.0 0.0 0.0 25.43676037204408 1.8484302661188248 1.8484302661188248 3.0102999566398125 0 0.7887254899964358 0.0 0.0 0.3494850021680094 + + KYN{I|L}M{I|L}VR{I|L};KY{I|L}NM{I|L}VR{I|L};KYN{I|L}M{I|L}[R{I|L}]V;KYN{I|L}{I|L}MVR{I|L};KY{I|L}NM{I|L}[R{I|L}]V;K{I|L}YNM{I|L}VR{I|L};KY{I|L}N{I|L}MVR{I|L};KYGG{I|L}M{I|L}VR{I|L};KYN{I|L}{I|L}M[R{I|L}]V;KY{I|L}GGM{I|L}VR{I|L} 4.8649;4.6029;4.56;4.3408;4.2979;4.0894;4.0787;4.0633;4.0358;3.8012 +;-;-;-;-;-;-;-;-;- + 399 + 1 1.147 58201.1 1.0 12596 5758 18345 HBL1_DMSO_200M_050219_1,18356 HBL1_DMSO_200M_050219_1,18356,KYNIMLVRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18357 87.8 63.0 783540.0 25 0 67500.0 + 14605 IIERQLKRKE 10 83 438.2743433902932 1311.8012007710795 3 438.2740356326103 MULTI CID FTMS 0 0 0 18345 417561.78125 0.597482297734321 5 -0.5489883422851562 12 Unmodified _IIERQLKRKE_ REV__ENST00000489603.5_1_2:238678415-238722246:+|nuORF 9.38312468134398 0.6832340498775793 3 [VG]{M(Oxidation (M))|F} 3 -1 27.447 0.0 0.0 2.0923 0.0 0.0 0.0 1005.6228416131434 1005.6228416131434 14.21916357811594 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VG]{M(Oxidation (M))|F} 2.0923 - 67 + 1 1.147 46502.8 1.0 12597 5758 18345 HBL1_DMSO_200M_050219_1,18357 HBL1_DMSO_200M_050219_1,18357,IIERQLKRKE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18358 87.802 87.0 736010.0 25 0 138110.0 + 11472 GIIADIKMV 9 88 480.2835022219204 958.5524515106408 2 480.2836486697197 MULTI CID FTMS 0 0 0 18345 426834.84375 0.471020902467154 1 -0.0653533935546875 13 Unmodified _GIIADIKMV_ ENSG00000131370|ENST00000383791|SH3BP5;nc|ENSG00000131370|O60239-2|SH3BP5 41.8396318013385 0.0653578398400075 3 {[VA]|[{I|L}G]}{I|L}AD{I|L}KMV 9 0 + 72.061 0.0 0.0 7.5177 7.5177 89.245 0.0 0.0 0.0 24.168497772343898 10.880952688561967 10.880952688561967 6.478174818886373 0 1.066901560044258 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}{I|L}AD{I|L}KMV;{[VA]|[{I|L}G]}{I|L}W{I|L}KMV;{[VA]|[{I|L}G]}EKM{I|L}[R{I|L}];{[VA]|[{I|L}G]}{I|L}TCA{I|L}[R{I|L}];{[VA]|[{I|L}G]}{I|L}[SG]M{I|L}[R{I|L}];{[VA]|[{I|L}G]}{I|L}A[YG]PG{I|L}V;[{I|L}A]DKM{I|L}[R{I|L}];[{I|L}A]VTCA{I|L}[R{I|L}];{[VA]|[{I|L}G]}{I|L}A[YG]PGV{I|L};{[VA]|[{I|L}G]}{I|L}[YQ]PG{I|L}V 7.5177;6.8419;5.6191;5.507;4.6767;4.5004;4.1553;4.0432;3.9782;3.8189 +;-;-;-;-;-;-;-;-;- + 489 + 1 1.147 54470.9 1.0 12598 5758 18345 HBL1_DMSO_200M_050219_1,18358 HBL1_DMSO_200M_050219_1,18358,GIIADIKMV True True GIIADIKMV 87.802287 480.28364866972 6104660.0 18345.0 ENSG00000131370|ENST00000383791|SH3BP5;;nc|ENSG00000131370|O60239-2|SH3BP5 6.730556964874268 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18359 87.807 238.0 442610.0 25 0 78501.0 + 30275 QYPDFNNYL 9 136 587.2639125451897 1172.5132721571792 2 587.2640258669853 MULTI CID FTMS 0 0 0 18345 357212.46875 0.7491234459314529 1 -0.0653533935546875 14 Unmodified _QYPDFNNYL_ ENSG00000083312|ENST00000337273|TNPO1;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000083312|Q92973-3|TNPO1 88.90359156742426 0.0153595091083554 3 [DP]YQ{M(Oxidation (M))|F}NNY{I|L} 9 4 + 62.744 0.0 0.0 5.3512 5.3512 74.44 0.0 0.0 0.0 0.5115252244738144 8.877969164706784 0.5115252244738144 0.5115252244738144 0 0.5682503180159344 0.9208187539523752 1.6989700043360187 1.5 [DP]YQ{M(Oxidation (M))|F}NNY{I|L};[{M(Oxidation (M))|F}V]EQ{M(Oxidation (M))|F}NNY{I|L};[DP]{M(Oxidation (M))|F}NNYQY{I|L};[YQ][DP]{M(Oxidation (M))|F}NNY{I|L};[DP]YQ{M(Oxidation (M))|F}NGGY{I|L};[DP]YQ{M(Oxidation (M))|F}GGNY{I|L};[{M(Oxidation (M))|F}V]EQ{M(Oxidation (M))|F}GGNY{I|L};[{M(Oxidation (M))|F}V]EQ{M(Oxidation (M))|F}NGGY{I|L};[DP]{M(Oxidation (M))|F}N{I|L}C(Carbamidomethyl (C))D[RH];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}NNY{I|L} 5.3512;5.3076;5.0922;4.779;4.5659;4.5659;4.5223;4.5223;4.4668;4.3244 -;-;-;+;-;-;-;-;-;- + 3620 1 1.147 83406.7 1.0 12599 5758 18345 HBL1_DMSO_200M_050219_1,18359 HBL1_DMSO_200M_050219_1,18359,QYPDFNNYL True True QYPDFNNYL 87.806743 587.264025866985 5749647.5 18345.0 nc|ENSG00000083312|Q92973-2|TNPO1;;ENSG00000083312|ENST00000337273|TNPO1;;nc|ENSG00000083312|Q92973-3|TNPO1 7.691172440846761 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18360 87.81 140.0 748870.0 25 0 47678.0 + 38273 TPYWMAPEV 9 119 547.2535337764875 1092.492514619775 2 547.2553588747978 MULTI CID FTMS 0 0 0 18345 311863.34375 0.1835911603917474 -2 0.222381591796875 15 Unmodified _TPYWMAPEV_ ENSG00000011566|ENST00000263881|MAP4K3;ENSG00000012983|ENST00000682126|MAP4K5;ENSG00000065613|ENST00000369755|SLK;ENSG00000071054|ENST00000324219|MAP4K4;ENSG00000072786|ENST00000176763|STK10;ENSG00000077264|ENST00000372007|PAK3;ENSG00000101349|ENST00000353224|PAK5;ENSG00000104814|ENST00000396857|MAP4K1;ENSG00000123572|ENST00000243300|NRK;ENSG00000135090|ENST00000392533|TAOK3;ENSG00000137843|ENST00000560346|PAK6;ENSG00000141503|ENST00000355280|MINK1;ENSG00000149269|ENST00000356341|PAK1;ENSG00000149930|ENST00000308893|TAOK2;ENSG00000154310|ENST00000436636|TNIK;ENSG00000160551|ENST00000261716|TAOK1;ENSG00000168067|ENST00000294066|MAP4K2;ENSG00000176601|ENST00000392915|MAP3K19;ENSG00000180370|ENST00000327134|PAK2;ENST00000476609.1_1_2:102441885-102476398:+|nuORF;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;ENST00000577583.1_1_17:27807410-27838022:+|nuORF;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;nc|ENSG00000011566|Q8IVH8-3|MAP4K3;nc|ENSG00000065613|Q9H2G2-2|SLK;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000077264|O75914-3|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000104814|Q92918|MAP4K1;nc|ENSG00000137843|Q9NQU5-2|PAK6;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1;nc|ENSG00000149269|Q13153-2|PAK1;nc|ENSG00000149930|Q9UL54-2|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;nc|ENSG00000160551|Q7L7X3-2|TAOK1;nc|ENSG00000160551|Q7L7X3-3|TAOK1;nc|ENSG00000168067|Q12851-2|MAP4K2;nc|ENSG00000176601|Q56UN5-3|MAP3K19;nc|ENSG00000176601|Q56UN5-4|MAP3K19;nc|ENSG00000176601|Q56UN5-5|MAP3K19;nc|ENSG00000176601|Q56UN5-7|MAP3K19 71.13359017698441 0.0206607516130725 3 AMTCPEV 7 6 60.169 0.0 0.0 5.5075 0.0 0.0 343.17044327001696 0.0 343.17044327001696 0.0 30.894965043607403 0.0 0.0 0 0.2742275032520141 0.0 1.841129063296272 0.0 AMTCPEV 5.5075 - 1839 + 1 1.147 97139.4 1.0 12600 5758 18345 HBL1_DMSO_200M_050219_1,18360 HBL1_DMSO_200M_050219_1,18360,TPYWMAPEV True True TPYWMAPEV 87.809572 547.255358874798 29773136.0 18345.0 nc|ENSG00000176601|Q56UN5-7|MAP3K19;;nc|ENSG00000071054|O95819|MAP4K4;;nc|ENSG00000011566|Q8IVH8-3|MAP4K3;;nc|ENSG00000077264|O75914-4|PAK3;;nc|ENSG00000149930|Q9UL54-4|TAOK2;;nc|ENSG00000141503|Q8N4C8-4|MINK1;;ENSG00000154310|ENST00000436636|TNIK;;nc|ENSG00000176601|Q56UN5-4|MAP3K19;;ENSG00000071054|ENST00000324219|MAP4K4;;ENSG00000065613|ENST00000369755|SLK;;nc|ENSG00000154310|Q9UKE5-4|TNIK;;ENSG00000149269|ENST00000356341|PAK1;;ENSG00000012983|ENST00000682126|MAP4K5;;nc|ENSG00000154310|Q9UKE5-2|TNIK;;ENSG00000104814|ENST00000396857|MAP4K1;;ENSG00000176601|ENST00000392915|MAP3K19;;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;;nc|ENSG00000071054|O95819-5|MAP4K4;;nc|ENSG00000154310|Q9UKE5-6|TNIK;;ENSG00000123572|ENST00000243300|NRK;;nc|ENSG00000071054|O95819-4|MAP4K4;;nc|ENSG00000149930|Q9UL54-2|TAOK2;;nc|ENSG00000141503|Q8N4C8-2|MINK1;;ENST00000476609.1_1_2:102441885-102476398:+|nuORF;;nc|ENSG00000160551|Q7L7X3-2|TAOK1;;nc|ENSG00000154310|Q9UKE5-7|TNIK;;nc|ENSG00000176601|Q56UN5-5|MAP3K19;;nc|ENSG00000104814|Q92918|MAP4K1;;nc|ENSG00000149269|Q13153-2|PAK1;;ENSG00000160551|ENST00000261716|TAOK1;;nc|ENSG00000168067|Q12851-2|MAP4K2;;nc|ENSG00000141503|Q8N4C8-5|MINK1;;nc|ENSG00000141503|Q8N4C8-3|MINK1;;nc|ENSG00000176601|Q56UN5-3|MAP3K19;;nc|ENSG00000154310|Q9UKE5-8|TNIK;;ENSG00000077264|ENST00000372007|PAK3;;nc|ENSG00000160551|Q7L7X3-3|TAOK1;;ENSG00000137843|ENST00000560346|PAK6;;ENSG00000168067|ENST00000294066|MAP4K2;;ENSG00000011566|ENST00000263881|MAP4K3;;ENSG00000072786|ENST00000176763|STK10;;nc|ENSG00000071054|O95819-2|MAP4K4;;ENSG00000180370|ENST00000327134|PAK2;;ENST00000577583.1_1_17:27807410-27838022:+|nuORF;;nc|ENSG00000154310|Q9UKE5-3|TNIK;;nc|ENSG00000071054|O95819-6|MAP4K4;;nc|ENSG00000065613|Q9H2G2-2|SLK;;nc|ENSG00000077264|O75914-3|PAK3;;nc|ENSG00000154310|Q9UKE5-5|TNIK;;nc|ENSG00000071054|O95819-3|MAP4K4;;ENSG00000135090|ENST00000392533|TAOK3;;ENSG00000141503|ENST00000355280|MINK1;;ENSG00000149930|ENST00000308893|TAOK2;;nc|ENSG00000137843|Q9NQU5-2|PAK6;;nc|ENSG00000077264|O75914|PAK3;;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;;ENSG00000101349|ENST00000353224|PAK5 6.339838822682698 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18361 87.82 591.0 306610.0 25 0 45834.0 + 40890 VLRLSDKRINV 11 211 656.9083365164169 1311.8021200996336 2 656.9073974490166 MULTI CID FTMS 0 0 0 18345 281937.625 1.0 0 0.0 16 Unmodified _VLRLSDKRINV_ REV__ENSG00000102858|ENST00000262370|MGRN1;REV__nc|ENSG00000102858|O60291-3|MGRN1;REV__nc|ENSG00000102858|O60291-4|MGRN1;REV__nc|ENSG00000102858|O60291|MGRN1 12.872603262515298 0.7673816944342327 3 VG{M(Oxidation (M))|F} 3 -1 37.044 0.0 0.0 2.8239 0.0 0.0 0.0 1005.6209492244468 1005.6209492244468 18.54400818852417 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 0.0 0.0 VG{M(Oxidation (M))|F} 2.8239 - 692 + 1 1.147 149221.3 1.0 12601 5758 18345 HBL1_DMSO_200M_050219_1,18361 HBL1_DMSO_200M_050219_1,18361,VLRLSDKRINV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18362 87.825 300.0 356290.0 25 0 50291.0 + 13003 HAPSIVFI 8 114 442.2554338195976 882.4963147059952 2 442.2555419802666 MULTI CID FTMS 0 0 0 18345 275623.0 0.3961436705842955 2 -0.25006103515625 17 Unmodified _HAPSIVFI_ ENSG00000100764|ENST00000261303|PSMC1;ENST00000555787.1_1_14:90734518-90735894:+|nuORF;nc|ENSG00000100764|P62191-2|PSMC1 42.96799951952854 0.1846367511955703 3 [HA][PS]{I|L}V{M(Oxidation (M))|F}{I|L} 8 0 + 41.604 0.0 0.0 4.7143 4.7143 77.563 0.0 0.0 0.0 17.486512420283233 19.261805833062773 17.486512420283233 3.711375162600703 0 0.7742275032520141 1.3979400086720375 0.6237125054200234 0.0 + + [HA][PS]{I|L}V{M(Oxidation (M))|F}{I|L};[HA]V[TP]V{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}P[HA]V{M(Oxidation (M))|F}{I|L};[PS]{I|L}[HA]V{M(Oxidation (M))|F}{I|L};[PS][HA]{I|L}V{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}PVAH{M(Oxidation (M))|F}{I|L};[VP]T[HA]V{M(Oxidation (M))|F}{I|L};[PS]{I|L}VAH{M(Oxidation (M))|F}{I|L};[HV]A[TP]V{M(Oxidation (M))|F}{I|L};[VP]TVAH{M(Oxidation (M))|F}{I|L} 4.7143;4.2938;2.2789;2.0275;1.9971;1.7614;1.5967;1.51;1.2873;1.0792 +;-;-;-;-;-;-;-;-;- + 333 1 1.147 90164.4 1.0 12602 5758 18345 HBL1_DMSO_200M_050219_1,18362 HBL1_DMSO_200M_050219_1,18362,HAPSIVFI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18363 87.828 120.0 950530.0 25 0 122170.0 + 5579 DMYLVPKL 8 99 489.7699285117599 977.5253040903198 2 489.7703124880791 MULTI CID FTMS 0 0 0 18345 255786.9375 0.0721371045837673 -4 0.3903732299804687 18 Unmodified _DMYLVPKL_ ENSG00000186141|ENST00000334163|POLR3C 48.345845343767074 0.1470278396477103 3 [MD]Y{I|L}VPK{I|L} 8 0 + 68.651 0.0 0.0 7.023 7.023 92.569 0.0 0.0 0.0 43.24539712336197 11.938200260161125 11.938200260161125 12.730012720637376 0 1.1307196863200843 2.0 0.0 0.0 + + [MD]Y{I|L}VPK{I|L};[MD]Y{I|L}V{I|L}[KP] 7.023;5.7207 +;- + 120 + 1 1.147 91724.8 1.0 12603 5758 18345 HBL1_DMSO_200M_050219_1,18363 HBL1_DMSO_200M_050219_1,18363,DMYLVPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18364 87.839 655.0 264330.0 25 0 18266.0 + 34836 SQFQQEFPSL 10 200 605.7908993268463 1209.5672457204926 2 605.7905151247978 MULTI CID FTMS 0 0 0 18345 246664.40625 0.0691254263162909 7 -0.7596206665039062 19 Unmodified _SQFQQEFPSL_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 103.41943736471065 0.0068563894390004 3 {[QS]|[NT]}{M(Oxidation (M))|F}QQE{M(Oxidation (M))|F}A{I|L}{I|L} 10 2 + 69.002 0.0 0.0 5.7047 5.7047 83.873 0.0 0.0 0.0 6.48022099218155 5.764837301042718 5.764837301042718 6.48022099218155 0 1.0 0.1739251972991735 1.0614894033036408 1.5713337517843655 {[QS]|[NT]}{M(Oxidation (M))|F}QQE{M(Oxidation (M))|F}A{I|L}{I|L};[PS][YG]Q{[QS]|[NT]}{M(Oxidation (M))|F}A{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQQE{M(Oxidation (M))|F}A{I|L}{I|L};[PS][NS]{M(Oxidation (M))|F}{[QS]|[NT]}{M(Oxidation (M))|F}A{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SQQE{M(Oxidation (M))|F}A{I|L}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}Q[AG]E{M(Oxidation (M))|F}A{I|L}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}[AG]QE{M(Oxidation (M))|F}A{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}Q{[QS]|[NT]}{M(Oxidation (M))|F}A{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QSQE{M(Oxidation (M))|F}A{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GAQQE{M(Oxidation (M))|F}A{I|L}{I|L} 5.7047;5.1689;5.1013;5.0114;4.9732;4.947;4.947;4.8324;4.795;4.7839 -;-;-;-;-;-;-;-;-;- 10122 1 1.147 121638.7 1.0 12604 5758 18345 HBL1_DMSO_200M_050219_1,18364 HBL1_DMSO_200M_050219_1,18364,SQFQQEFPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18365 87.846 364.0 333250.0 25 0 40490.0 + 18491 KYNIMLVRL 9 103 383.8984755830074 1148.6735973492223 3 383.8983642458916 MULTI CID FTMS 0 0 0 18345 231585.359375 0.2588040751087743 -4 0.3903732299804687 20 Unmodified _KYNIMLVRL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 47.594388314883695 0.0456443387682827 3 [YN]K{I|L}M{I|L}V{I|L}R 9 4 [YN]K{I|L} + + 40.152 19.481 3.7588 3.4955 3.4955 51.229 0.0 0.0 0.0 0.0 20.67024086827658 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.75 [YN]K{I|L}M{I|L}V{I|L}R 3.4955 - 229 + 1 1.147 104269.3 1.0 12605 5758 18345 HBL1_DMSO_200M_050219_1,18365 HBL1_DMSO_200M_050219_1,18365,KYNIMLVRL True True KYNIMLVRL 87.845847 383.898364245892 67172878.0 18345.0 nc|ENSG00000156261|P50990-2|CCT8;;nc|ENSG00000156261|P50990-3|CCT8;;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;;ENSG00000156261|ENST00000286788|CCT8 6.197367986043294 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18367 87.851 24.0 5396400.0 25 0 638050.0 + 22562 LPWSNPLKV 9 122 527.3082810701694 1052.6020092071387 2 527.3084594607353 MULTI CID FTMS 0 0 0 18366 4548544.5 0.8255381077348906 2 -0.278411865234375 1 Unmodified _LPWSNPLKV_ ENSG00000134077|ENST00000452837|THUMPD3 114.4966697963812 0.0036609773476835 3 {I|L}PWSNP{I|L}KV 9 0 + 107.49 0.0 0.0 10.212 10.212 89.288 0.0 0.0 0.0 32.81427260186008 3.802112417116064 3.802112417116064 3.802112417116064 0 2.4361818737241734 2.0 0.7302046884880937 0.3252574989159953 + + {I|L}PWSNP{I|L}KV;{I|L}PWSNP{I|L}VK;{I|L}PWSGGP{I|L}KV;{I|L}PWSGGP{I|L}VK;[{I|L}P]WSNPKV{I|L};[WP]SN{I|L}PKV{I|L};[{I|L}P]NSWPKV{I|L};[WP]{I|L}SNPKV{I|L};[{I|L}P]C(Carbamidomethyl (C))N{I|L}PKV{I|L};{I|L}PV[C(Carbamidomethyl (C))Q]P{I|L}KV 10.212;9.8506;9.337;8.9758;8.3452;7.6587;7.6191;7.4655;7.1928;7.1429 +;-;-;-;-;-;-;-;-;- + 2479 + 1 1.147 107823.8 1.0 12606 5759 18366 HBL1_DMSO_200M_050219_1,18367 HBL1_DMSO_200M_050219_1,18367,LPWSNPLKV True True LPWSNPLKV 87.850647 527.308459460735 182021004.0 18366.0 ENSG00000134077|ENST00000452837|THUMPD3 7.250129222869873 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18368 87.852 16.0 7729300.0 25 0 1427700.0 + 12438 GTVEQIVYL 9 120 511.2824319070769 0 511.2823669314384 PEAK CID FTMS 0 0 0 18366 6692632.0 1.0 0 0.0 2 Unmodified _GTVEQIVYL_ ENSG00000182481|ENST00000330459|KPNA2 52.268347100219714 0.0254642048063414 3 V{[SA]|[TG]}{I|L}D 5 7 24.323 0.0 0.0 2.3833 0.0 0.0 294.15945502333506 238.12056909732652 532.2800241206617 0.0 0.0 0.0 0.0 0 0.5 0.0 1.25 0.0 V{[SA]|[TG]}{I|L}D 2.3833 - 958 + 1 1.147 96007.7 1.0 12607 5759 18366 HBL1_DMSO_200M_050219_1,18368 HBL1_DMSO_200M_050219_1,18368,GTVEQIVYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18369 87.853 29.0 5445600.0 25 0 436590.0 + 34001 SLIRNLEQL 9 112 543.3207946817142 1084.6270364302284 2 543.3201171755791 MULTI CID FTMS 0 0 0 18366 4439014.5 1.0 0 0.0 3 Unmodified _SLIRNLEQL_ ENSG00000076944|ENST00000221283|STXBP2;ENST00000593854.5_1_19:7709481-7711320:+|nuORF;ENST00000601061.1_1_19:7710099-7712134:+|nuORF;nc|ENSG00000076944|Q15833-2|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2 93.16586880292088 0.0136995152735431 3 {[TV]|[{I|L}S]}{I|L}RN{I|L}EQ{I|L} 9 0 + 91.785 0.0 0.0 8.4623 8.4623 92.512 0.0 0.0 0.0 20.737862141609185 60.63449780168415 20.737862141609185 8.495302317543633 0 1.555462187404089 2.0 0.5021934810768762 0.9604093769761874 + + {[TV]|[{I|L}S]}{I|L}RN{I|L}EQ{I|L};{[TV]|[{I|L}S]}{I|L}RNE{I|L}Q{I|L};{[TV]|[{I|L}S]}{I|L}RGG{I|L}EQ{I|L};{[TV]|[{I|L}S]}{I|L}[VG]N{I|L}EQ{I|L};{[TV]|[{I|L}S]}{I|L}RN{I|L}E[AG]{I|L};{[TV]|[{I|L}S]}{I|L}RQVEQ{I|L};{[TV]|[{I|L}S]}{I|L}RNE{I|L}[AG]{I|L};{[TV]|[{I|L}S]}{I|L}RGGE{I|L}Q{I|L};{[TV]|[{I|L}S]}{I|L}[VG]NE{I|L}Q{I|L};{[TV]|[{I|L}S]}{I|L}[VG]N{I|L}E[AG]{I|L} 8.4623;7.6791;7.6133;7.6133;7.6133;7.4957;6.8301;6.8301;6.8301;6.7684 +;-;-;-;-;-;-;-;-;- + 3709 1 1.147 123813.8 1.0 12608 5759 18366 HBL1_DMSO_200M_050219_1,18369 HBL1_DMSO_200M_050219_1,18369,SLIRNLEQL True True SLIRNLEQL 87.853003 543.320117175579 72836672.0 18366.0 ENST00000593854.5_1_19:7709481-7711320:+|nuORF;;nc|ENSG00000076944|Q15833-2|STXBP2;;ENSG00000076944|ENST00000221283|STXBP2;;nc|ENSG00000076944|Q15833-3|STXBP2;;ENST00000601061.1_1_19:7710099-7712134:+|nuORF 5.614562193552653 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18370 87.854 51.0 3361400.0 25 0 307830.0 + 24843 MPLLTPRYI 9 102 552.3177280993688 1102.6209032655374 2 552.3182250857353 MULTI CID FTMS 0 0 0 18366 2632308.5 1.0 0 0.0 4 Unmodified _MPLLTPRYI_ ENSG00000117153|ENST00000367261|KLHL12;nc|ENSG00000117153|Q53G59-2|KLHL12 115.6920309560759 0.0032017028976397 3 MP{I|L}{I|L}TPRY{I|L} 9 0 + 98.556 0.0 0.0 8.9383 8.9383 95.572 0.0 0.0 0.0 59.694155139232194 13.156945555393976 13.156945555393976 10.562921620997912 0 1.4731975075880328 1.5228787452803376 1.579689690656103 0.805462187404089 + + MP{I|L}{I|L}TPRY{I|L};MP{I|L}{I|L}T[YR]P{I|L};MP{I|L}{I|L}PTRY{I|L};MP{I|L}{I|L}PP{I|L}[HV]S;MP{I|L}{I|L}TP[HV][VP];M{I|L}P{I|L}TPRY{I|L};MP{I|L}{I|L}P[HV]SP{I|L};MP{I|L}{I|L}P[HV]T[VP];MP{I|L}{I|L}{I|L}{[HG]|PP}[HV]S;MP{I|L}{I|L}PT[HV][VP] 8.9383;7.9803;7.7584;6.9508;6.7774;6.5381;6.2811;6.0353;6.0254;5.9827 +;-;-;-;-;-;-;-;-;- + 1086 + 1 1.147 137790.6 1.0 12609 5759 18366 HBL1_DMSO_200M_050219_1,18370 HBL1_DMSO_200M_050219_1,18370,MPLLTPRYI True True MPLLTPRYI 87.854357 552.318225085735 142122432.0 18366.0 nc|ENSG00000117153|Q53G59-2|KLHL12;;ENSG00000117153|ENST00000367261|KLHL12 5.557422955830892 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18371 87.856 43.0 3646300.0 25 0 324700.0 38440 TRSPLLTQL 9 139 514.8087773478536 1027.6030017625071 2 514.8109008669853 MULTI CID FTMS 0 0 0 18366 2498016.5 0.3482006210558926 3 -0.3208389282226562 5 Unmodified _TRSPLLTQL_ ENSG00000119411|ENST00000374183|BSPRY 41.95555342248728 0.0647214845423414 3 {[VA]|[{I|L}G]}[RD]{I|L}{I|L}TQ{I|L} 9 4 + 66.506 0.0 0.0 6.4719 6.4719 89.221 0.0 0.0 0.0 14.981427974198454 14.09256854528806 14.09256854528806 9.208187539523747 0 1.086696871556164 2.0 0.3252574989159953 0.3054621874040891 {[VA]|[{I|L}G]}[RD]{I|L}{I|L}TQ{I|L};{[VA]|[{I|L}G]}[RD]{I|L}{I|L}T[AG]{I|L};{[VA]|[{I|L}G]}E[RV]{I|L}TQ{I|L};{[VA]|[{I|L}G]}E[R{I|L}]VTQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}{I|L}{I|L}TQ{I|L};{[VA]|[{I|L}G]}[RD]{I|L}{I|L}{I|L}[QT];{[VA]|[{I|L}G]}[RD]{I|L}{I|L}G[TA]{I|L};{[VA]|[{I|L}G]}E[RV]{I|L}T[AG]{I|L};{[QN]|[E{I|L}]|[KN]}T[KP]VTQ{I|L};{[VA]|[{I|L}G]}E[R{I|L}]{I|L}SQ{I|L} 6.4719;5.5758;5.4174;5.1245;5.014;4.7714;4.5847;4.5213;4.4565;4.4058 -;-;-;-;-;-;-;-;-;- 2174 1 1.147 119361.0 1.0 12610 5759 18366 HBL1_DMSO_200M_050219_1,18371 HBL1_DMSO_200M_050219_1,18371,TRSPLLTQL True True GLLERVIDL 87.855566 514.810900866985 23843524.0 18366.0 nc|ENSG00000130638|Q9UBB4-2|ATXN10;;ENSG00000130638|ENST00000252934|ATXN10;;ENST00000483549.5_1_22:46114317-46136469:+|nuORF 2.986312468846639 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18372 87.858 92.0 1952100.0 25 0 337990.0 + 18693 LAIWEASL 8 106 451.75254133747273 901.4905297417456 2 451.7529479861259 MULTI CID FTMS 0 0 0 18366 2157112.75 0.0924540104984892 28 -2.9603347778320312 6 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 59.79521254764295 0.1151759508933577 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 3 57.708 0.0 0.0 6.4014 0.0 0.0 0.0 199.1070400881892 199.1070400881892 28.904039732413214 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 6.4014 - 1259 1 1.147 142677.0 1.0 12611 5759 18366 HBL1_DMSO_200M_050219_1,18372 HBL1_DMSO_200M_050219_1,18372,LAIWEASL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18373 87.867 561.0 430090.0 25 0 44555.0 + 34822 SQFPGAITL 9 180 467.2553476162436 932.4961422992872 2 467.2555724978447 MULTI CID FTMS 0 0 0 18366 419738.0 0.8040685403020946 3 -0.3208389282226562 7 Unmodified _SQFPGAITL_ ENST00000263083.10_1_17:1944800-1946395:+|nuORF;ENST00000571710.5_1_17:1945525-1946395:+|nuORF;nc|ENSG00000262664|Q8WZ82|OVCA2 75.76082778847304 0.0188720312721366 3 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}[{I|L}T] 8 2 + 42.216 0.0 0.0 4.5272 4.5272 70.828 0.0 0.0 0.0 12.534321326171334 4.6040937697618745 4.6040937697618745 0.0527250510330645 0 1.1989700043360187 0.721246399047171 0.8145152305677003 0.5994850021680094 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}[{I|L}T];{[QS]|[NT]}{M(Oxidation (M))|F}[PG]A{I|L}[{I|L}T];{[QS]|[NT]}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[{I|L}T];[QP]{I|L}T{M(Oxidation (M))|F}N[{I|L}T];{[SA]|[TG]}G{M(Oxidation (M))|F}[QP]{I|L}[{I|L}T];{[SA]|[TG]}G{M(Oxidation (M))|F}[PG]A{I|L}[{I|L}T];[QP]{I|L}{M(Oxidation (M))|F}TN[{I|L}T];[QP]{I|L}TN{M(Oxidation (M))|F}[{I|L}T];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{[QS]|[NT]}{I|L}[{I|L}T];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[SG]A{I|L}[{I|L}T] 4.5272;4.5216;3.6087;3.183;3.1025;2.7538;2.7003;2.6067;2.5772;2.5715 -;+;-;-;-;-;-;-;-;- + 1596 1 1.147 183922.1 1.0 12612 5759 18366 HBL1_DMSO_200M_050219_1,18373 HBL1_DMSO_200M_050219_1,18373,SQFPGAITL True True SQFPGAITL 87.867422 467.255572497845 23292912.0 18366.0 ENST00000571710.5_1_17:1945525-1946395:+|nuORF;;ENST00000263083.10_1_17:1944800-1946395:+|nuORF;;nc|ENSG00000262664|Q8WZ82|OVCA2 6.3185224533081055 2.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 18374 87.878 599.0 505520.0 25 0 42857.0 + 3376 AYQFFREAL 9 201 572.7935500098347 1143.5725470864693 2 572.7935668826103 MULTI CID FTMS 0 0 0 18366 340464.53125 1.0 0 0.0 8 Unmodified _AYQFFREAL_ ENSG00000110583|ENST00000377793|NAA40;ENST00000338447.10_1_11:63714317-63721948:+|nuORF;ENST00000534965.5_1_11:63706554-63721948:+|nuORF;ENST00000544138.5_1_11:63714317-63721948:+|nuORF;ENST00000544194.5_1_11:63720210-63721948:+|nuORF;nc|ENSG00000110583|Q86UY6-3|NAA40;nc|ENSG00000110583|Q86UY6-4|NAA40 83.42873516780209 0.0166860047644719 3 AYQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}REA{I|L} 9 0 + 92.445 0.0 0.0 8.0839 8.0839 93.298 0.0 0.0 0.0 21.6195437047216 19.28005711472842 19.28005711472842 9.208187539523747 0 2.172167511924052 2.0 0.6549471895720985 0.6549471895720985 + + AYQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}REA{I|L};AY[AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}REA{I|L};AYQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}WG{I|L};AY[VS]T{I|L}{M(Oxidation (M))|F}AC(Carbamidomethyl (C)){I|L};AY[VS]T{I|L}{M(Oxidation (M))|F}AGC{I|L};AYQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}WAV;AYQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}KPM;AY{I|L}{[CA]|SS}{I|L}{M(Oxidation (M))|F}AC(Carbamidomethyl (C)){I|L};AYQ{M(Oxidation (M))|F}[{I|L}A][{M(Oxidation (M))|F}T]A{I|L};AY{I|L}{[CA]|SS}{I|L}{M(Oxidation (M))|F}AGC{I|L} 8.0839;7.2787;7.0937;6.5571;6.4974;6.3979;6.333;6.3284;6.2999;6.2688 +;-;-;-;-;-;-;-;-;- + 11362 + 1 1.147 222842.4 1.0 12613 5759 18366 HBL1_DMSO_200M_050219_1,18374 HBL1_DMSO_200M_050219_1,18374,AYQFFREAL True True AYQFFREAL 87.877895 572.79356688261 3042981.5 18366.0 ENST00000544194.5_1_11:63720210-63721948:+|nuORF;;ENSG00000110583|ENST00000377793|NAA40;;ENST00000544138.5_1_11:63714317-63721948:+|nuORF;;nc|ENSG00000110583|Q86UY6-4|NAA40;;nc|ENSG00000110583|Q86UY6-3|NAA40;;ENST00000534965.5_1_11:63706554-63721948:+|nuORF;;ENST00000338447.10_1_11:63714317-63721948:+|nuORF 7.290253798166911 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18375 87.891 752.0 389500.0 25 0 42749.0 1902 ALYSDRSI 8 200 462.7439258842263 923.4732988352524 2 462.7440063357353 MULTI CID FTMS 0 0 0 18366 261768.65625 0.148636063210824 37 -3.9190750122070312 9 Unmodified _ALYSDRSI_ ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5 19.438996006549623 0.6237395211498085 3 [{I|L}A]P{I|L} 4 5 38.06 0.0 0.0 4.1214 0.0 0.0 0.0 526.1916597955686 526.1916597955686 18.138181262758263 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.1214 - 574 + 1 1.147 221535.6 1.0 12614 5759 18366 HBL1_DMSO_200M_050219_1,18375 HBL1_DMSO_200M_050219_1,18375,ALYSDRSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18376 87.903 687.0 373820.0 25 0 45943.0 -1 0 194 644.9786223670937 1931.914037701481 3 644.9799072146416 MULTI CID FTMS 0 0 0 18366 259830.0625 0.5977872152209891 -2 0.2004928588867187 10 3 [NP]{I|L}NADTSPNG{M(Oxidation (M))|F}{I|L}Q 14 -1 53.981 0.0 0.0 2.7942 0.0 0.0 0.0 460.1868517208506 460.1868517208506 -4.171830999738361 0.0 -4.171830999738361 0.0 0 0.5891368308784531 0.9208187539523752 0.0 1.236346736360778 [NP]{I|L}NADTSPNG{M(Oxidation (M))|F}{I|L}Q 2.7942 - 160100 1 1.147 195690.9 1.0 12615 5759 18366 HBL1_DMSO_200M_050219_1,18376 HBL1_DMSO_200M_050219_1,18376, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18377 87.916 772.0 289590.0 25 0 32079.0 -1 LSLMSCTI 8 196 470.7263124699047 939.4380720066094 2 470.7265807986259 MULTI CID FTMS 0 0 0 18366 251102.84375 0.0515743225118854 37 -3.9190750122070312 11 Carbamidomethyl (C),Oxidation (M) _LSLM(Oxidation (M))SC(Carbamidomethyl (C))TI_ ENST00000304056.8_1_7:32919423-32919537:-|nuORF 30.22481116460888 0.4082965392918993 3 {I|L}S[DC]T{I|L}G 7 -1 44.848 0.0 0.0 4.774 0.0 0.0 0.0 247.12094286372337 247.12094286372337 26.353575364612503 0.0 0.0 0.0 0 0.3494850021680094 0.8239087409443188 1.0138793319624575 0.0 {I|L}S[DC]T{I|L}G 4.774 - 843 + 1 1.147 174110.2 1.0 12616 5759 18366 HBL1_DMSO_200M_050219_1,18377 HBL1_DMSO_200M_050219_1,18377,LSLMSCTI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18378 87.929 719.0 369440.0 25 0 34901.0 + 29420 QLESHDVHLS 10 219 582.7853227646449 1163.5560925960897 2 582.7856933474541 MULTI CID FTMS 0 0 0 18366 229615.125 0.0271929858323928 10 -1.0538558959960938 12 Unmodified _QLESHDVHLS_ REV__ENSG00000184163|ENST00000330388|C1QTNF12 17.11289562659939 0.5604042439455784 3 {I|L}{I|L}DQE{I|L} 6 -1 49.416 0.0 0.0 4.247 0.0 0.0 0.0 449.1532394528765 449.1532394528765 22.39390533523615 0.0 0.0 0.0 0 0.6307196863200843 2.0 0.5484550065040282 0.0 {I|L}{I|L}DQE{I|L} 4.247 - 2052 1 1.147 200133.6 1.0 12617 5759 18366 HBL1_DMSO_200M_050219_1,18378 HBL1_DMSO_200M_050219_1,18378,QLESHDVHLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18379 87.938 413.0 278510.0 25 0 29614.0 + 32174 RVTDEILHLV 10 133 597.8458385717522 1193.6771242103043 2 597.8467285037041 MULTI CID FTMS 0 0 0 18366 214532.265625 1.0 0 0.0 13 Unmodified _RVTDEILHLV_ ENSG00000090060|ENST00000216277|PAPOLA;ENSG00000115421|ENST00000238714|PAPOLG;ENSG00000218823|ENST00000404991|PAPOLB;nc|ENSG00000090060|P51003-2|PAPOLA;nc|ENSG00000115421|Q9BWT3-2|PAPOLG 21.59015148037692 0.4836074274810599 3 {[TV]|[{I|L}S]}[RD]E{I|L}{I|L}H{I|L}V 10 2 + 55.313 0.0 0.0 4.6339 4.6339 77.824 0.0 0.0 0.0 4.2469727149764935 16.53212513775344 4.2469727149764935 4.2469727149764935 0 0.8252574989159953 0.8239087409443188 0.1989700043360188 0.2887254899964357 {[TV]|[{I|L}S]}[RD]E{I|L}{I|L}H{I|L}V;[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{I|L}{I|L}H{I|L}V;[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L}{I|L}H{I|L}V;[{M(Oxidation (M))|F}V][KP]E{I|L}{I|L}H{I|L}V;{[TV]|[{I|L}S]}[RD]E{I|L}VH{I|L}{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{I|L}VH{I|L}{I|L};[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L}VH{I|L}{I|L};[{M(Oxidation (M))|F}V][KP]E{I|L}VH{I|L}{I|L} 4.6339;4.2781;3.833;3.833;1.0409;0.68511;0.24007;0.24007 -;-;-;-;-;-;-;- 296 1 1.147 94003.1 1.0 12618 5759 18366 HBL1_DMSO_200M_050219_1,18379 HBL1_DMSO_200M_050219_1,18379,RVTDEILHLV False True RVTDEILHLV 87.93759 597.846728503704 4324696.5 18366.0 nc|ENSG00000090060|P51003-2|PAPOLA;;ENSG00000115421|ENST00000238714|PAPOLG;;ENSG00000218823|ENST00000404991|PAPOLB;;ENSG00000090060|ENST00000216277|PAPOLA;;nc|ENSG00000115421|Q9BWT3-2|PAPOLG 6.952077388763428 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18380 87.947 514.0 319470.0 25 0 33812.0 2026 APGESLPLL 9 150 448.7585182171038 895.5024835010076 2 448.7581664919853 MULTI CID FTMS 0 0 0 18366 206851.265625 0.967736820821536 -1 0.0653533935546875 14 Unmodified _APGESLPLL_ ENST00000579520.5_1_17:79976760-79977069:-|nuORF 36.04419817259434 0.0971720506436186 3 [WP]RDP{I|L}{I|L} 7 5 + 34.397 0.0 0.0 3.8411 3.8411 77.296 0.0 0.0 0.0 5.861331293925996 8.455160254500239 5.861331293925996 5.861331293925996 0 0.8296896906561032 1.6989700043360187 0.5 0.0 [WP]RDP{I|L}{I|L};[PA]ADS{I|L}P{I|L}{I|L};[DP]AAS{I|L}P{I|L}{I|L};[PA]ASD{I|L}P{I|L}{I|L};[PA]DAS{I|L}P{I|L}{I|L};[QT]PD{I|L}P{I|L}{I|L};{[DA]|[EG]}PAS{I|L}P{I|L}{I|L};[{I|L}P][QT]DP{I|L}{I|L};[PA]AS{I|L}DP{I|L}{I|L};[DP][QT]{I|L}P{I|L}{I|L} 3.8411;3.1866;3.0986;3.0549;2.99;2.665;2.5969;2.3412;2.1391;2.0192 -;-;-;-;-;-;-;-;-;- 311 1 1.147 126926.2 1.0 12619 5759 18366 HBL1_DMSO_200M_050219_1,18380 HBL1_DMSO_200M_050219_1,18380,APGESLPLL True True DPAASLPII 87.946649 448.758166491985 3204395.0 18366.0 nc|ENSG00000164118|Q9C0F1-2|CEP44;;ENSG00000164118|ENST00000503780|CEP44 2.038813538228472 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18381 87.96 800.0 127870.0 25 0 7322.9 + + -1 SAIHLIDPNTLQV 13 136 710.8939035179787 1419.7732541027574 2 710.8946411013603 MULTI CID FTMS 0 0 0 18366 188709.046875 1.0 0 0.0 15 Carbamidomethyl (C) _QLFAWC(Carbamidomethyl (C))KKLVQ_ ENSG00000169251|ENST00000351193|NMD3;ENST00000439704.1_1_7:63369621-63370485:-|nuORF 20.41453444215458 0.6105011870913812 3 {[TV]|[{I|L}S]}[HA]{I|L}{I|L}DPNT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 13 -1 + 71.899 0.0 0.0 5.0641 5.0641 80.719 0.0 0.0 0.0 3.203591620858788 56.11497275686428 3.203591620858788 5.469744059249209 0 0.7614393726401688 0.958607314841775 1.5994850021680094 0.0 {[TV]|[{I|L}S]}[HA]{I|L}{I|L}DPNT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[VA]|[{I|L}G]}[HT]{I|L}{I|L}DPNT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}[HA]{I|L}{I|L}DPGGT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[VA]|[{I|L}G]}[HT]{I|L}{I|L}DPGGT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[PG]KPAA{I|L}DPNT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}[HA]{I|L}{I|L}YYT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[PG]KP[RV]DPNT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[KP]GPAA{I|L}DPNT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[PG]KPAA{I|L}DPGGT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}H[RP]TQT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 5.0641;4.6789;4.4251;4.0399;3.6104;3.2585;3.1408;3.0677;2.973;2.966 -;-;-;-;-;-;-;-;-;- 1518 1 1.147 78097.1 0.7699999809265137 12620 5759 18366 HBL1_DMSO_200M_050219_1,18381 HBL1_DMSO_200M_050219_1,18381,QLFAWCKKLVQ False False SAIHLIDPNTLQV 87.96048 710.89464110136 2119794.0 18366.0 ENSG00000169251|ENST00000351193|NMD3;;ENST00000439704.1_1_7:63369621-63370485:-|nuORF 7.477979977925618 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18382 87.976 800.0 221040.0 25 0 21156.0 + + -1 YPFSSEQKWMAV 12 163 736.847031825712 1471.6795107182238 2 737.3492919802666 MULTI CID FTMS 0 0 0 18366 191233.921875 0.5057320289088171 4 -0.4836349487304687 16 Oxidation (M) _HLLEQWNKEM(Oxidation (M))E_ nc|ENSG00000017260|P98194-7|ATP2C1;nc|ENSG00000017260|P98194-4|ATP2C1;ENSG00000017260|ENST00000510168|ATP2C1;nc|ENSG00000017260|P98194-2|ATP2C1;nc|ENSG00000017260|P98194-9|ATP2C1;nc|ENSG00000017260|P98194-3|ATP2C1;nc|ENSG00000017260|P98194-6|ATP2C1;nc|ENSG00000017260|P98194-5|ATP2C1;nc|ENSG00000017260|P98194-8|ATP2C1 6.2057823575117 0.8458686499021061 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}A[KC]HPDR[SG] 13 -1 + 45.17 0.0 0.0 3.0693 3.0693 68.082 0.0 0.0 0.0 3.155980316589364 6.642078980768069 3.155980316589364 0.6214790674884441 0 0.0 1.0457574905606752 0.1237125054200235 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}A[KC]HPDR[SG];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}AYC[WK]R[SG];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}AYC[KA]DR[SG];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}AYC[QA]DR[SG];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}A[KC]HPDR[SG];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}AYC[WK]R[SG];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}AYC[QA]DR[SG];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}AYC[KA]DR[SG];{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}A[KC]HPDR[SG];{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}AYC[WK]R[SG] 3.0693;3.027;3.0034;3.0034;2.8548;2.8126;2.789;2.789;2.745;2.7028 -;-;-;-;-;-;-;-;-;- 5793 1 1.147 130225.8 0.7599999904632568 12621 5759 18366 HBL1_DMSO_200M_050219_1,18382 HBL1_DMSO_200M_050219_1,18382,HLLEQWNKEME False False YPFSSEQKWMAV 87.975502 736.8483 3477948.5 18366.0 nc|ENSG00000017260|P98194-7|ATP2C1;;nc|ENSG00000017260|P98194-4|ATP2C1;;ENSG00000017260|ENST00000510168|ATP2C1;;nc|ENSG00000017260|P98194-2|ATP2C1;;nc|ENSG00000017260|P98194-9|ATP2C1;;nc|ENSG00000017260|P98194-3|ATP2C1;;nc|ENSG00000017260|P98194-6|ATP2C1;;nc|ENSG00000017260|P98194-5|ATP2C1;;nc|ENSG00000017260|P98194-8|ATP2C1 -0.546146348118782 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18383 87.989 772.0 374380.0 25 0 56402.0 + 36262 SYFEIPTKEF 10 190 630.811612690942 1259.6086724486838 2 631.3137084841728 MULTI CID FTMS 0 0 0 18366 177260.546875 0.9820236481877616 -1 0.0653533935546875 17 Unmodified _SYFEIPTKEF_ ENSG00000143702|ENST00000366542|CEP170;ENST00000502249.6_1_4:119401524-119435218:+|nuORF;nc|ENSG00000143702|Q5SW79-2|CEP170;nc|ENSG00000143702|Q5SW79-3|CEP170 49.52724829834842 0.0829255630816734 3 [TP]KE{I|L}{M(Oxidation (M))|F}E{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F} 10 7 + 44.273 0.0 0.0 3.5148 3.5148 70.597 0.0 0.0 0.0 7.734135917829754 3.8464343345171415 3.8464343345171415 1.6378675338813622 0 0.3054621874040891 0.9208187539523752 0.9436726795685342 0.0 [TP]KE{I|L}{M(Oxidation (M))|F}E{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F};[TP]KE{M(Oxidation (M))|F}{I|L}E{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F};[KT]PE{I|L}{M(Oxidation (M))|F}E{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F};[KT]PE{M(Oxidation (M))|F}{I|L}E{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T][R{I|L}]{I|L}CE{M(Oxidation (M))|F}[MT];[VG]AVE{I|L}{M(Oxidation (M))|F}E{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F};[TP]K{I|L}E{M(Oxidation (M))|F}E{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F};[VG]AVE{M(Oxidation (M))|F}{I|L}E{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F};[TP]KE{I|L}{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[MT];[TP]KE{M(Oxidation (M))|F}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[MT] 3.5148;3.3848;2.9008;2.7707;2.6329;2.5399;2.4434;2.4099;2.3249;2.1949 -;-;-;-;-;-;-;-;-;- 3283 1 1.147 218365.8 1.0 12622 5759 18366 HBL1_DMSO_200M_050219_1,18383 HBL1_DMSO_200M_050219_1,18383,SYFEIPTKEF True True SYFEIPTKEF 87.988869 631.313708484173 2684047.5 18366.0 nc|ENSG00000143702|Q5SW79-3|CEP170;;ENSG00000143702|ENST00000366542|CEP170;;ENST00000502249.6_1_4:119401524-119435218:+|nuORF;;nc|ENSG00000143702|Q5SW79-2|CEP170 7.465188026428223 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18384 88.003 800.0 154250.0 25 0 15090.0 -1 0 132 1030.1650534537205 3087.4733309613616 3 1030.496142566204 MULTI CID FTMS 0 0 0 18366 139130.90625 0.0507721579130454 14 -1.4813995361328125 18 3 [NP]{I|L}N[{M(Oxidation (M))|F}T]K{[QS]|[NT]}A 10 -1 21.119 0.0 0.0 0.68404 0.0 0.0 0.0 1983.9078762096617 1983.9078762096617 -1.8635573063958617 0.0 -1.8635573063958617 0.0 0 0.5 0.0 0.25 0.5994850021680094 [NP]{I|L}N[{M(Oxidation (M))|F}T]K{[QS]|[NT]}A 0.68404 - 4753 1 1.147 81798.2 0.949999988079071 12623 5759 18366 HBL1_DMSO_200M_050219_1,18384 HBL1_DMSO_200M_050219_1,18384, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18385 88.018 800.0 211060.0 25 0 41212.0 -1 EPLSRMLCFCI 11 154 713.3355370115962 1424.6565210899923 2 713.3365966677666 MULTI CID FTMS 0 0 0 18366 124207.9921875 1.0 0 0.0 19 2 Carbamidomethyl (C) _EPLSRMLC(Carbamidomethyl (C))FC(Carbamidomethyl (C))I_ ENST00000254101.3_1_1:146630991-146631057:-|nuORF 17.11289562659939 0.6791789249425932 3 [EP]{I|L}[EC]NA{M(Oxidation (M))|F}YQV{I|L} 12 -1 + 65.767 0.0 0.0 4.6164 4.6164 71.333 0.0 0.0 0.0 0.2287874528033739 9.877203139966312 0.2287874528033739 0.2287874528033739 0 1.1237125054200234 1.2218487496163564 0.3054621874040891 1.079689690656103 [EP]{I|L}[EC]NA{M(Oxidation (M))|F}YQV{I|L};{[QN]|[E{I|L}]|[KN]}P[EC]NA{M(Oxidation (M))|F}YQV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AQQNA{M(Oxidation (M))|F}YQV{I|L};[EP]{I|L}[EC]NA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QN]|[E{I|L}]|[KN]}P[EC]GGA{M(Oxidation (M))|F}YQV{I|L};{[QN]|[E{I|L}]|[KN]}P[EC]NA{M(Oxidation (M))|F}Y[AG]V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}G{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}YQV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GG{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}YQV{I|L};[Y{M(Oxidation (M))|F}]N{M(Oxidation (M))|F}NA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}G{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}YQV{I|L} 4.6164;4.6003;4.097;3.9777;3.9617;3.9617;3.7933;3.7933;3.6192;3.5999 -;-;-;-;-;-;-;-;-;- 3215 1 1.147 124571.8 0.9399999976158142 12624 5759 18366 HBL1_DMSO_200M_050219_1,18385 HBL1_DMSO_200M_050219_1,18385,EPLSRMLCFCI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18386 88.031 768.0 254220.0 25 0 39430.0 -1 0 137 957.9247452119891 1913.8349374907784 2 957.9242431521416 MULTI CID FTMS 0 0 0 18366 117480.703125 0.726312760300797 -1 0.0653533935546875 20 3 [YQ]YDPEQ{I|L}D{I|L}A{[QD]|[EN]|[WG]|[KD]|[RS]}[WM] 15 -1 + 41.48 0.0 0.0 2.1674 2.1674 69.207 0.0 0.0 0.0 2.085725843182089 5.131189079911806 2.085725843182089 2.085725843182089 0 0.3182503180159344 0.0 0.0 1.0629529932484498 [YQ]YDPEQ{I|L}D{I|L}A{[QD]|[EN]|[WG]|[KD]|[RS]}[WM];[PG]Q{M(Oxidation (M))|F}{I|L}P{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}D{I|L}A{[QD]|[EN]|[WG]|[KD]|[RS]}[WM];{NN|[MP]|[D{I|L}]|[EV]}KWP{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}D{I|L}A{[QD]|[EN]|[WG]|[KD]|[RS]}[WM];[YQ]YDPEQ{I|L}D{I|L}[WQ][WM];[PG]Q{M(Oxidation (M))|F}{I|L}P{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}D{I|L}[WQ][WM];[PG]Q{M(Oxidation (M))|F}P{I|L}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}D{I|L}A{[QD]|[EN]|[WG]|[KD]|[RS]}[WM];{NN|[MP]|[D{I|L}]|[EV]}KWP{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}D{I|L}[WQ][WM];[YQ]YDS[WP]PD{I|L}A{[QD]|[EN]|[WG]|[KD]|[RS]}[WM];[PG]Q{M(Oxidation (M))|F}P{I|L}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}D{I|L}[WQ][WM];[EP]Q{I|L}D{I|L}D[EP]D{I|L}A{[QD]|[EN]|[WG]|[KD]|[RS]}[WM] 2.1674;2.0584;1.9724;1.8178;1.7078;1.6658;1.6228;1.428;1.3152;1.2455 -;-;-;-;-;-;-;-;-;- 15334 1 1.147 132159.6 1.0 12625 5759 18366 HBL1_DMSO_200M_050219_1,18386 HBL1_DMSO_200M_050219_1,18386, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18388 88.035 28.0 1856300.0 25 0 285320.0 + 32202 RVVDLITNL 9 65 521.8159296941199 1041.6173064550396 2 521.8165771365166 MULTI CID FTMS 0 0 0 18387 1312370.0 0.4595092427841806 1 -0.0937042236328125 1 Unmodified _RVVDLITNL_ ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 40.23920728925047 0.0741434193262949 3 D{I|L}{I|L}TN{I|L} 6 3 50.438 0.0 0.0 4.8423 0.0 0.0 354.2388172834 0.0 354.2388172834 0.0 30.147678599754 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.0 + D{I|L}{I|L}TN{I|L} 4.8423 + + 154 1 1.153 47020.8 1.0 12626 5760 18387 HBL1_DMSO_200M_050219_1,18388 HBL1_DMSO_200M_050219_1,18388,RVVDLITNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18389 88.037 47.0 873160.0 25 0 148180.0 30927 RKFGRFLKMI 10 58 432.59754038684 1294.7707917607202 3 432.5975524783134 MULTI CID FTMS 0 0 0 18387 968343.0 0.7452138604546464 1 -0.0937042236328125 2 Unmodified _RKFGRFLKMI_ ENST00000395603.7_1_X:76907692-76907743:-|nuORF 1.4819007175156935 0.719781833666733 3 V 1 10 11.594 0.0 0.0 0.89543 0.0 0.0 1177.6912914939217 0.0 1177.6912914939217 0.0 2.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.89543 - 8 + 1 1.153 45989.2 1.0 12627 5760 18387 HBL1_DMSO_200M_050219_1,18389 HBL1_DMSO_200M_050219_1,18389,RKFGRFLKMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18390 88.038 12.0 6131500.0 25 0 1054300.0 + 45752 YYISPRLTF 9 47 580.3108966406983 1158.6072403481965 2 580.3112670779228 MULTI CID FTMS 0 0 0 18387 4359893.5 0.1232550085161114 -3 0.3852005004882812 3 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 12.240655878213236 0.5053430591993562 3 YY{I|L}S 4 5 56.186 0.0 0.0 4.8494 0.0 0.0 0.0 629.3418880988473 629.3418880988473 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YY{I|L}S 4.8494 + + 16 + 1 1.153 62868.0 1.0 12628 5760 18387 HBL1_DMSO_200M_050219_1,18390 HBL1_DMSO_200M_050219_1,18390,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18391 88.039 14.0 4428100.0 25 0 621420.0 + 25589 NFIEKVEAL 9 79 531.7952446517659 1061.5759363703316 2 531.7955200076103 MULTI CID FTMS 0 0 0 18387 4290437.0 0.204707770535752 -2 0.25006103515625 4 Unmodified _NFIEKVEAL_ ENSG00000092201|ENST00000216297|SUPT16H 29.081581746732265 0.1611639662936252 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SR 9 7 + 41.193 0.0 0.0 3.8804 3.8804 76.498 0.0 0.0 0.0 5.687036221786698 9.137342758552691 5.687036221786698 4.815534464597697 0 1.1237125054200234 0.0 1.4604093769761874 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SR;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SR 3.8804;3.4268;3.3447 -;-;- 361 1 1.153 51018.2 1.0 12629 5760 18387 HBL1_DMSO_200M_050219_1,18391 HBL1_DMSO_200M_050219_1,18391,NFIEKVEAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18392 88.04 19.0 2017000.0 25 0 463800.0 + 17029 KKKKIWDIWNV 11 53 486.6275399362145 1456.8607904088435 3 486.6277038455009 MULTI CID FTMS 0 0 0 18387 2272667.25 0.967274376712556 -1 0.1847076416015625 5 Unmodified _KKKKIWDIWNV_ REV__ENSG00000121314|ENST00000240615|TAS2R8 1.3296431237094175 0.8688745925763601 3 V 1 -1 11.783 0.0 0.0 0.80878 0.0 0.0 1339.7813282890177 0.0 1339.7813282890177 0.0 0.8136364874884983 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.80878 + + 38 + 1 1.153 42727.2 1.0 12630 5760 18387 HBL1_DMSO_200M_050219_1,18392 HBL1_DMSO_200M_050219_1,18392,KKKKIWDIWNV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18393 88.041 35.0 1594500.0 25 0 272120.0 + 13704 HQLENLSNFI 10 67 607.8118489992056 1213.6091450652111 2 607.8122436404228 MULTI CID FTMS 0 0 0 18387 1652068.0 0.2625659119399397 -2 0.25006103515625 6 Unmodified _HQLENLSNFI_ ENSG00000064666|ENST00000263097|CNN2;ENST00000443067.1_1_1:166765603-166766044:+|nuORF;nc|ENSG00000064666|Q99439-2|CNN2 71.70789743142352 0.0188816056000227 3 [HQ]{I|L}EN{I|L}SN{M(Oxidation (M))|F}{I|L} 10 0 + 87.542 0.0 0.0 7.2134 7.2134 90.683 0.0 0.0 0.0 9.017412290202673 78.07827834592722 9.017412290202673 9.164539485499247 0 1.2302046884880935 0.0 0.8807196863200843 1.1307196863200843 + + [HQ]{I|L}EN{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EGG{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EN{I|L}SGG{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EGG{I|L}SGG{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{M(Oxidation (M))|F}V]N{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}E[KA]DN{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{M(Oxidation (M))|F}V]N{I|L}SGG{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{M(Oxidation (M))|F}V]GG{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}E[KA]DGG{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{M(Oxidation (M))|F}V][KA]DN{M(Oxidation (M))|F}{I|L} 7.2134;6.4582;6.4582;5.7061;5.5033;5.2926;4.7481;4.7481;4.5375;3.5825 +;-;-;-;-;-;-;-;-;- + 508 1 1.153 48264.9 1.0 12631 5760 18387 HBL1_DMSO_200M_050219_1,18393 HBL1_DMSO_200M_050219_1,18393,HQLENLSNFI True True HQLENLSNFI 88.041379 607.812243640423 99083296.0 18387.0 ENSG00000064666|ENST00000263097|CNN2;;nc|ENSG00000064666|Q99439-2|CNN2;;ENST00000443067.1_1_1:166765603-166766044:+|nuORF 8.201387723286947 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18394 88.043 53.0 789630.0 25 0 34860.0 -1 0 65 973.9729449418528 1945.9313369505053 2 974.475634753704 MULTI CID FTMS 0 0 0 18387 1317540.5 1.0 0 0.0 7 3 [NP]{I|L}NM 5 -1 17.051 0.0 0.0 0.87626 0.0 0.0 0.0 1373.641394894118 1373.641394894118 4.375306316958499 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [NP]{I|L}NM 0.87626 - 124 1 1.153 37180.0 1.0 12632 5760 18387 HBL1_DMSO_200M_050219_1,18394 HBL1_DMSO_200M_050219_1,18394, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18395 88.044 65.0 1265500.0 25 0 119950.0 + 42918 VVQPLLVSV 9 99 477.3049644896983 952.5953760461964 2 477.3048889040947 MULTI CID FTMS 0 0 0 18387 947998.3125 1.0 0 0.0 8 Unmodified _VVQPLLVSV_ ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4 48.345845343767074 0.0439967357579942 3 [{I|L}P]{I|L}VVQ 6 5 39.43 0.0 0.0 4.1392 0.0 0.0 0.0 300.15530992304394 300.15530992304394 15.885540741363188 0.0 0.0 0.0 0 0.3054621874040891 1.0969100130080565 0.0 0.0 [{I|L}P]{I|L}VVQ 4.1392 - 311 1 1.153 71360.7 1.0 12633 5760 18387 HBL1_DMSO_200M_050219_1,18395 HBL1_DMSO_200M_050219_1,18395,VVQPLLVSV True True VVQPLLVSV 88.044346 477.304888904095 10538788.0 18387.0 ENSG00000115484|ENST00000394440|CCT4;;nc|ENSG00000115484|P50991-2|CCT4 2.189751386642456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18396 88.046 37.0 1172900.0 25 0 163920.0 + 22617 LPYLPHYI 8 78 508.2825944458267 1014.5506359584534 2 508.2830993533134 MULTI CID FTMS 0 0 0 18387 660765.4375 1.0 0 0.0 9 Unmodified _LPYLPHYI_ ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A 64.08090720244739 0.1161809961245979 3 {I|L}PY{I|L}PHY{I|L} 8 0 + 78.018 0.0 0.0 7.6899 7.6899 95.775 0.0 0.0 0.0 62.94554654357964 14.024174299985006 14.024174299985006 23.273589343863307 0 0.6694451763165201 1.6989700043360187 0.0 0.0 + + {I|L}PY{I|L}PHY{I|L};{I|L}PY{I|L}P[WQ]V;{I|L}PY[KQ][HM]V 7.6899;5.3959;3.8445 +;-;- + 129 + 1 1.153 46538.8 1.0 12634 5760 18387 HBL1_DMSO_200M_050219_1,18396 HBL1_DMSO_200M_050219_1,18396,LPYLPHYI True True LPYLPHYI 88.045525 508.283099353313 9946007.0 18387.0 nc|ENSG00000148396|O15027-2|SEC16A;;nc|ENSG00000148396|O15027-4|SEC16A;;nc|ENSG00000148396|O15027-3|SEC16A;;nc|ENSG00000148396|O15027-5|SEC16A;;ENSG00000148396|ENST00000684901|SEC16A 6.520473003387451 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18397 88.049 154.0 550660.0 25 0 54457.0 + 45071 YPYHLSDIMV 10 98 619.2995229229734 1236.5844929127468 2 619.2996093630791 MULTI CID FTMS 0 0 0 18387 608358.125 1.0 0 0.0 10 Unmodified _YPYHLSDIMV_ ENSG00000176853|ENST00000334705|FAM91A1;ENST00000454544.2_1_1:147907560-147907839:+|nuORF 42.09456458481378 0.1354489350322421 3 {NN|[MP]|[D{I|L}]|[EV]}Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PY{I|L}MV 10 6 + 68.677 0.0 0.0 5.5538 5.5538 83.796 0.0 0.0 0.0 6.989700043360188 16.53212513775344 6.989700043360188 6.817496819840656 0 0.8494850021680094 1.6989700043360187 1.079689690656103 0.0 {NN|[MP]|[D{I|L}]|[EV]}Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PY{I|L}MV;{NN|[MP]|[D{I|L}]|[EV]}Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}P{I|L}YMV;{[TV]|[{I|L}S]}[HD]YPY{I|L}MV;{NN|[MP]|[D{I|L}]|[EV]}Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{M(Oxidation (M))|F}{I|L}MV;{[TV]|[{I|L}S]}[HD]{I|L}{M(Oxidation (M))|F}Y{I|L}MV;{NN|[MP]|[D{I|L}]|[EV]}[AG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PY{I|L}MV;[H{I|L}]{M(Oxidation (M))|F}{I|L}{[DS]|[MA]|[CV]|TT}Y{I|L}MV;{NN|[MP]|[D{I|L}]|[EV]}Q{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[DS]|[MA]|[CV]|TT}{I|L}MV;[H{I|L}]{M(Oxidation (M))|F}Y{I|L}{[DS]|[MA]|[CV]|TT}{I|L}MV;{[TV]|[{I|L}S]}[HD]YP{I|L}YMV 5.5538;5.0025;4.9885;4.8853;4.8461;4.8127;4.7451;4.53;4.4625;4.4372 -;-;-;-;-;-;-;-;-;- 2129 1 1.153 68277.7 1.0 12635 5760 18387 HBL1_DMSO_200M_050219_1,18397 HBL1_DMSO_200M_050219_1,18397,YPYHLSDIMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18398 88.052 173.0 607010.0 25 0 193010.0 -1 0 73 426.2387692975909 425.2314928309909 1 426.2384521365166 MULTI CID FTMS 0 0 0 18387 558893.9375 0.2893034842127242 -10 1.0451126098632812 11 3 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 -1 + 35.674 0.0 0.0 8.3893 8.3893 95.804 0.0 0.0 0.0 18.22682509756042 12.84318117920506 12.84318117920506 14.419628234359578 0 0.4247425010840047 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F} 8.3893;4.9983 -;- 18 + 1 1.153 93240.8 1.0 12636 5760 18387 HBL1_DMSO_200M_050219_1,18398 HBL1_DMSO_200M_050219_1,18398, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18399 88.055 144.0 354760.0 25 0 127430.0 37023 TFRLLQKPLRW 11 63 729.4376166995928 1456.8606804659855 2 729.4380370974541 MULTI CID FTMS 0 0 0 18387 505644.875 0.7555688088799847 -1 0.1847076416015625 12 Unmodified _TFRLLQKPLRW_ ENSG00000011028|ENST00000303375|MRC2 0.3070304955306653 0.8736993455979228 3 R 1 10 0.3786 0.0 0.0 0.025988 0.0 0.0 1174.6923587880542 123.04589258365468 1297.7382513717089 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.025988 + + 8 + 1 1.153 52938.1 1.0 12637 5760 18387 HBL1_DMSO_200M_050219_1,18399 HBL1_DMSO_200M_050219_1,18399,TFRLLQKPLRW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18400 88.063 467.0 218030.0 25 0 52982.0 15622 IQEIKLKNPGR 11 108 648.3932180704345 1294.771883207669 2 648.3940307497978 MULTI CID FTMS 0 0 0 18387 413343.625 0.7552013962351711 1 -0.0937042236328125 13 Unmodified _IQEIKLKNPGR_ ENSG00000129204|ENST00000574788|USP6;ENST00000357482.5_1_17:5035679-5037292:+|nuORF;nc|ENSG00000129204|P35125-3|USP6 4.5288652416199255 0.8537804541365391 3 V 1 11 10.379 0.0 0.0 0.80158 0.0 0.0 1177.692436346632 0.0 1177.692436346632 0.0 0.1010169304414354 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.80158 - 64 + 1 1.153 98469.4 1.0 12638 5760 18387 HBL1_DMSO_200M_050219_1,18400 HBL1_DMSO_200M_050219_1,18400,IQEIKLKNPGR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18401 88.065 64.0 762750.0 25 0 116530.0 + 12603 GVIPRVIQL 9 72 497.82430771292536 0 497.8248474001884 PEAK CID FTMS 0 0 0 18387 376922.59375 0.4451427513596729 1 -0.0937042236328125 14 Unmodified _GVIPRVIQL_ ENSG00000090889|ENST00000374403|KIF4A;nc|ENSG00000090889|O95239-2|KIF4A 8.593279151180031 0.3284076903191179 3 PYG 3 8 10.177 0.0 0.0 1.0242 0.0 0.0 111.19382919362576 562.2799776666624 673.4738068602882 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PYG 1.0242 - 30 + 1 1.153 46554.9 1.0 12639 5760 18387 HBL1_DMSO_200M_050219_1,18401 HBL1_DMSO_200M_050219_1,18401,GVIPRVIQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18402 88.074 518.0 242780.0 25 0 22224.0 + 36443 SYYPAENLIEY 11 150 681.3162193138011 1360.617885694402 2 681.3174316287041 MULTI CID FTMS 0 0 0 18387 333768.34375 0.9812932421736288 1 -0.0937042236328125 15 Unmodified _SYYPAENLIEY_ ENSG00000130024|ENST00000339209|PHF10;nc|ENSG00000130024|Q8WUB8-2|PHF10;nc|ENSG00000130024|Q8WUB8-3|PHF10 47.594388314883695 0.1309523012099263 3 [PA]EN{I|L}{I|L}E 7 4 35.807 0.0 0.0 2.6317 0.0 0.0 0.0 591.2071550637958 591.2071550637958 14.353607870443923 0.0 0.0 0.0 0 0.0 0.585026652029182 0.0 1.4049471895720984 + [PA]EN{I|L}{I|L}E 2.6317 + + 1767 1 1.153 95173.5 1.0 12640 5760 18387 HBL1_DMSO_200M_050219_1,18402 HBL1_DMSO_200M_050219_1,18402,SYYPAENLIEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18403 88.083 521.0 356520.0 25 0 25240.0 + 26289 NQVDDIRSFL 10 153 603.8090047195114 1205.6034565058228 2 603.8082763552666 MULTI CID FTMS 0 0 0 18387 333394.6875 0.5430591236740555 -2 0.25006103515625 16 Unmodified _NQVDDIRSFL_ ENSG00000116675|ENST00000371069|DNAJC6;nc|ENSG00000116675|O75061-3|DNAJC6;nc|ENSG00000116675|O75061-4|DNAJC6;nc|ENSG00000116675|O75061|DNAJC6 47.594388314883695 0.0942698883389255 3 {I|L}DDV[HS] 6 7 42.664 0.0 0.0 3.5388 0.0 0.0 521.2971160670884 0.0 521.2971160670884 0.0 17.74227503252014 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 {I|L}DDV[HS] 3.5388 - 1194 1 1.153 133842.9 1.0 12641 5760 18387 HBL1_DMSO_200M_050219_1,18403 HBL1_DMSO_200M_050219_1,18403,NQVDDIRSFL True True NQVDDIRSFL 88.083016 603.808276355267 4663141.5 18387.0 ENSG00000116675|ENST00000371069|DNAJC6;;nc|ENSG00000116675|O75061|DNAJC6;;nc|ENSG00000116675|O75061-4|DNAJC6;;nc|ENSG00000116675|O75061-3|DNAJC6 6.5033698081970215 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18404 88.092 535.0 488760.0 25 0 28211.0 + 30843 RILDIDNVDL 10 190 593.3270070317885 1184.639461130377 2 593.3276855349541 MULTI CID FTMS 0 0 0 18387 315019.53125 0.4188359542057871 -2 0.25006103515625 17 Unmodified _RILDIDNVDL_ ENSG00000104980|ENST00000270538|TIMM44;ENST00000598968.5_1_19:7992074-7996707:-|nuORF 59.36838082759317 0.0382430275470746 3 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}DNVD{I|L} 10 2 + 80.882 0.0 0.0 6.8276 6.8276 89.856 0.0 0.0 0.0 12.149729870589084 16.53212513775344 12.149729870589084 9.164539485499262 0 0.5 1.6989700043360187 0.3851518780601923 1.7416440611282626 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}DNVD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}DGGVD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}DRGD{I|L};{I|L}{I|L}RD{I|L}DNVD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}D[VG]GD{I|L};{I|L}{I|L}RD{I|L}DGGVD{I|L};{[QN]|[E{I|L}]|[KN]}[RV]{I|L}DNVD{I|L};[Q{I|L}][KQ]{I|L}DNVD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}][RD]AVD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]W{I|L}AVD{I|L} 6.8276;6.054;5.963;5.802;5.1894;5.0284;4.7501;4.5935;4.3861;4.385 -;-;-;-;-;-;-;-;-;- 1470 1 1.153 195407.3 1.0 12642 5760 18387 HBL1_DMSO_200M_050219_1,18404 HBL1_DMSO_200M_050219_1,18404,RILDIDNVDL True True RILDIDNVDL 88.092427 593.327685534954 4899560.5 18387.0 ENSG00000104980|ENST00000270538|TIMM44;;ENST00000598968.5_1_19:7992074-7996707:-|nuORF 6.177216370900472 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18405 88.102 548.0 310860.0 25 0 15933.0 -1 0 123 880.8978054364103 1759.7810579396205 2 881.3994018435478 MULTI CID FTMS 0 0 0 18387 317092.875 0.8921552197862584 -1 0.1847076416015625 18 3 [KT]EY{M(Oxidation (M))|F}ANQQAED 12 -1 91.429 0.0 0.0 5.1955 0.0 0.0 0.0 332.10029016666255 332.10029016666255 53.09606168438341 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.6861818737241735 2.0356668758921828 [KT]EY{M(Oxidation (M))|F}ANQQAED 5.1955 - 3820 + 1 1.153 122689.1 1.0 12643 5760 18387 HBL1_DMSO_200M_050219_1,18405 HBL1_DMSO_200M_050219_1,18405, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18406 88.113 549.0 422690.0 25 0 52708.0 + 42812 VVLDDKDYFL 10 166 613.819148261292 1225.6237435893838 2 613.8197509646416 MULTI CID FTMS 0 0 0 18387 287515.3125 0.4517355146937808 -2 0.25006103515625 19 Unmodified _VVLDDKDYFL_ ENSG00000115541|ENST00000233893|HSPE1;ENST00000465573.1_1_2:198365552-198367980:+|nuORF;ENST00000550617.1_1_12:102267096-102267252:-|nuORF 67.08073823543168 0.0190306485248484 3 VV{I|L}DNV{I|L}DD[QP] 11 6 + 90.144 0.0 0.0 7.3549 7.3549 85.631 0.0 0.0 0.0 41.77565206723632 1.077735547020879 1.077735547020879 3.520599913279625 0 0.6861818737241735 2.0 1.9361818737241727 0.0 VV{I|L}DNV{I|L}DD[QP];VV{I|L}DNVD{I|L}D[QP];VV{I|L}DNV{I|L}DDG[PA];VV{I|L}DNV{I|L}DDA[PG];VV{I|L}DGGV{I|L}DD[QP];VV{I|L}DNVD{I|L}DG[PA];VV{I|L}DNVD{I|L}DA[PG];VV{I|L}DGGVD{I|L}D[QP];VV{I|L}DDAAA{I|L}D[QP];VV{I|L}DWAA{I|L}D[QP] 7.3549;7.0677;6.6346;6.6346;6.6101;6.3473;6.3473;6.3229;6.1516;6.1034 -;-;-;-;-;-;-;-;-;- 11053 + 1 1.153 171309.2 1.0 12644 5760 18387 HBL1_DMSO_200M_050219_1,18406 HBL1_DMSO_200M_050219_1,18406,VVLDDKDYFL True True VVLDDKDYFL 88.112883 613.819750964642 5665349.0 18387.0 ENSG00000115541|ENST00000233893|HSPE1;;ENST00000465573.1_1_2:198365552-198367980:+|nuORF;;ENST00000550617.1_1_12:102267096-102267252:-|nuORF 4.557541529337565 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18407 88.125 685.0 209730.0 25 0 53463.0 -1 IEMRKKLEKKR 11 144 737.9499891024806 1473.885425271761 2 737.9521362185478 MULTI CID FTMS 0 0 0 18387 204004.21875 0.9222122691532731 -2 0.25006103515625 20 Oxidation (M) _IEM(Oxidation (M))RKKLEKKR_ ENSG00000154479|ENST00000447353|CFAP210 1.3295316138638542 0.8688751186870782 3 YY{I|L}{I|L} 4 -1 18.672 0.0 0.0 1.2669 0.0 0.0 0.0 918.5684446411548 918.5684446411548 5.818787619909781 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 YY{I|L}{I|L} 1.2669 - 183 1 1.153 115111.9 1.0 12645 5760 18387 HBL1_DMSO_200M_050219_1,18407 HBL1_DMSO_200M_050219_1,18407,IEMRKKLEKKR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18409 88.129 1.4 32281000.0 25 0 5082600.0 + 14499 IGLLSKKHL 9 55 504.83188664626135 1007.6492203593228 2 504.8325073122978 MULTI CID FTMS 0 0 0 18408 42201580.0 0.7845845687288941 -1 0.0937042236328125 1 Unmodified _IGLLSKKHL_ REV__ENST00000459708.1_1_1:85121010-85121631:-|nuORF 52.268347100219714 0.0353964759249114 3 {[VA]|[{I|L}G]}{I|L} 3 -1 34.437 0.0 0.0 3.4176 0.0 0.0 0.0 721.4365793283258 721.4365793283258 11.045124537045156 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L} 3.4176 + + 45 1 1.153 39494.2 1.0 12646 5761 18408 HBL1_DMSO_200M_050219_1,18409 HBL1_DMSO_200M_050219_1,18409,IGLLSKKHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18410 88.13 7.9 6197100.0 25 0 531300.0 + 44844 YPPAPFMHI 9 74 536.767818970596 1071.5210850079918 2 536.7682372927666 MULTI CID FTMS 0 0 0 18408 6323397.0 1.0 0 0.0 2 Unmodified _YPPAPFMHI_ ENSG00000143569|ENST00000428931|UBAP2L;ENST00000484819.1_1_1:154238957-154241481:+|nuORF;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 36.46614268402704 0.0948557732959553 3 YPPA{I|L}MM[H{I|L}] 9 2 + 66.38 0.0 0.0 6.195 6.195 89.626 0.0 0.0 0.0 51.76599703664159 5.253312076568903 5.253312076568903 11.00833760139686 0 0.3807196863200844 2.0 0.0 0.0 YPPA{I|L}MM[H{I|L}];YPPA{I|L}[YV]{[{M(Oxidation (M))|F}C]|[YS]};YPPA[KC][SG][H{I|L}];[PA][KC]M{I|L}AP{[QN]|[E{I|L}]|[KN]};[PA]P{M(Oxidation (M))|F}[KC]AP{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]QAP{[QN]|[E{I|L}]|[KN]};Y[HK]{I|L}[YV]{[{M(Oxidation (M))|F}C]|[YS]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PA][KC]AP{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MH{I|L}[VS]{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD][AG]AP{[QN]|[E{I|L}]|[KN]} 6.195;5.1676;4.5903;2.7429;2.4881;1.2089;1.1532;0.69298;0.5477;0.34956 -;-;-;-;-;-;-;-;-;- 232 + 1 1.153 48939.0 1.0 12647 5761 18408 HBL1_DMSO_200M_050219_1,18410 HBL1_DMSO_200M_050219_1,18410,YPPAPFMHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18411 88.131 18.0 4256500.0 25 0 578520.0 + 5580 DMYLVPKL 8 76 489.7699285117599 977.5253040903198 2 489.7703430056572 MULTI CID FTMS 0 0 0 18408 3263620.75 0.920407248569928 -1 0.0937042236328125 3 Unmodified _DMYLVPKL_ ENSG00000186141|ENST00000334163|POLR3C 39.957323273325 0.2350051964751539 3 [MD]Y{I|L}VPK{I|L} 8 0 + 63.37 0.0 0.0 6.4827 6.4827 85.137 0.0 0.0 0.0 19.943041170917432 5.13333427374107 5.13333427374107 5.13333427374107 0 1.1861818737241734 2.0 0.0 0.0 + + [MD]Y{I|L}VPK{I|L};[MD]Y{I|L}V{I|L}[KP] 6.4827;5.9576 +;- + 56 + 1 1.153 62704.2 1.0 12648 5761 18408 HBL1_DMSO_200M_050219_1,18411 HBL1_DMSO_200M_050219_1,18411,DMYLVPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18412 88.133 38.0 1306800.0 25 0 68592.0 -1 0 66 966.9643222406994 1931.9140915481987 2 967.4674560427666 MULTI CID FTMS 0 0 0 18408 2614279.75 0.8923824753675969 1 -0.0424270629882812 4 3 [NP]{I|L}NW[PG]RQDAN{NN|[MP]|[D{I|L}]|[EV]}[WH] 16 -1 + 57.807 0.0 0.0 2.9922 2.9922 73.016 0.0 0.0 0.0 18.62826806974688 31.86480976361331 18.62826806974688 3.6991128507179374 0 0.0 1.0969100130080565 0.0 0.3807196863200844 [NP]{I|L}NW[PG]RQDAN{NN|[MP]|[D{I|L}]|[EV]}[WH];[NP]{I|L}NW[PG]RQWN{NN|[MP]|[D{I|L}]|[EV]}[WH];[NP]{I|L}NW[PG]RQD[W{I|L}]N[WH];[NP]{I|L}NW[PG]RQW[WR][YC(Carbamidomethyl (C))];[NP]{I|L}NW[PG]RQDY[H{I|L}][WH] 2.9922;2.8007;2.6449;2.4544;2.3979 -;-;-;-;- 582 1 1.153 42125.1 1.0 12649 5761 18408 HBL1_DMSO_200M_050219_1,18412 HBL1_DMSO_200M_050219_1,18412, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18413 88.134 27.0 1229600.0 25 0 90875.0 + 13943 HYITPMMEL 9 55 567.7698787119199 1133.5252044906397 2 567.7697631716728 MULTI CID FTMS 0 0 0 18408 1804882.75 0.6386438604690127 1 -0.0424270629882812 5 Unmodified _HYITPMMEL_ ENSG00000099901|ENST00000430524|RANBP1;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1 44.40701690623563 0.0526327925666318 3 {[WN]|[YH]}{I|L}T{NN|[MP]|[D{I|L}]|[EV]}ME{I|L} 9 0 + 47.188 0.0 0.0 4.1629 4.1629 84.333 0.0 0.0 0.0 21.12704280191288 33.69309543086095 21.12704280191288 17.730012720637376 0 0.5074908058443608 1.3979400086720375 0.5 0.0 + + {[WN]|[YH]}{I|L}T{NN|[MP]|[D{I|L}]|[EV]}ME{I|L};{[WN]|[YH]}[VP][{M(Oxidation (M))|F}V]ME{I|L};[VP]{[WN]|[YH]}[{M(Oxidation (M))|F}V]ME{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[YG][YV]E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[RD]{NN|[MP]|[D{I|L}]|[EV]}ME{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[HA][YQ]ME{I|L} 4.1629;2.5988;1.1;0.76871;0.65885;0.0624 +;-;-;-;-;- + 56 1 1.153 33599.7 1.0 12650 5761 18408 HBL1_DMSO_200M_050219_1,18413 HBL1_DMSO_200M_050219_1,18413,HYITPMMEL True True HYITPMMEL 88.133803 567.769763171673 65703784.0 18408.0 nc|ENSG00000099901|P43487|RANBP1;;ENSG00000099901|ENST00000430524|RANBP1;;nc|ENSG00000099901|P43487-2|RANBP1 7.788976351420085 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18414 88.135 35.0 1319600.0 25 0 221980.0 1671 ALPAYPASL 9 62 451.75254133747273 901.4905297417456 2 451.7528259158134 MULTI CID FTMS 0 0 0 18408 1823006.125 0.0781341760738098 30 -3.069488525390625 6 Unmodified _ALPAYPASL_ ENSG00000132692|ENST00000329117|BCAN;nc|ENSG00000132692|Q96GW7-2|BCAN 30.22481116460888 0.1466181017706357 3 [{I|L}A]{M(Oxidation (M))|F}PAS 6 4 49.882 0.0 0.0 5.5333 0.0 0.0 0.0 312.1914490331258 312.1914490331258 30.431825014007217 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS 5.5333 - 211 1 1.153 43416.6 1.0 12651 5761 18408 HBL1_DMSO_200M_050219_1,18414 HBL1_DMSO_200M_050219_1,18414,ALPAYPASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18415 88.136 34.0 1733700.0 25 0 183320.0 + 18490 KYNIMLVRL 9 66 575.3441928266012 1148.6738327200023 2 575.3451415896416 MULTI CID FTMS 0 0 0 18408 1744034.75 0.7030809165912301 1 -0.0424270629882812 7 Unmodified _KYNIMLVRL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 33.4449034751529 0.1114409586740657 3 KYN{I|L}M{I|L}V[R{I|L}] 9 0 + 70.09 0.0 0.0 6.1019 6.1019 80.985 0.0 0.0 0.0 43.89252201045579 5.999161495794425 5.999161495794425 3.0102999566398125 0 0.75 1.0969100130080565 0.0 0.6549471895720985 + + KYN{I|L}M{I|L}V[R{I|L}];KY{I|L}NM{I|L}V[R{I|L}];KYN{I|L}{I|L}MV[R{I|L}];KY{I|L}N{I|L}MV[R{I|L}];KYGG{I|L}M{I|L}V[R{I|L}];KY{I|L}GGM{I|L}V[R{I|L}];KYGG{I|L}{I|L}MV[R{I|L}];KY{I|L}GG{I|L}MV[R{I|L}];K{I|L}YNM{I|L}V[R{I|L}];K{I|L}YN{I|L}MV[R{I|L}] 6.1019;5.8398;5.6865;5.4244;5.3002;5.0382;4.8849;4.6228;4.3396;3.9243 +;-;-;-;-;-;-;-;-;- + 300 + 1 1.153 51687.7 1.0 12652 5761 18408 HBL1_DMSO_200M_050219_1,18415 HBL1_DMSO_200M_050219_1,18415,KYNIMLVRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18416 88.137 25.0 1411500.0 25 0 189860.0 + 43084 VYLVNEVSV 9 63 511.2824319070769 0 511.2822448611259 PEAK CID FTMS 0 0 0 18408 1587508.625 0.2372024376956629 2 -0.2052230834960937 8 Unmodified _VYLVNEVSV_ REV__ENSG00000179542|ENST00000356928|SLITRK4 13.50788311687929 0.2720325786695375 3 {I|L}[Y{M(Oxidation (M))|F}]S 4 -1 5.534 0.0 0.0 0.54225 0.0 0.0 393.2267768006788 114.05652033023672 507.2832971309155 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 {I|L}[Y{M(Oxidation (M))|F}]S 0.54225 - 23 + 1 1.153 34427.1 1.0 12653 5761 18408 HBL1_DMSO_200M_050219_1,18416 HBL1_DMSO_200M_050219_1,18416,VYLVNEVSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18417 88.139 27.0 2000100.0 25 0 126950.0 + 38274 TPYWMAPEV 9 96 547.2535337764875 1092.492514619775 2 547.2551757693291 MULTI CID FTMS 0 0 0 18408 1444758.25 0.8505162562987183 1 -0.0424270629882812 9 Unmodified _TPYWMAPEV_ ENSG00000011566|ENST00000263881|MAP4K3;ENSG00000012983|ENST00000682126|MAP4K5;ENSG00000065613|ENST00000369755|SLK;ENSG00000071054|ENST00000324219|MAP4K4;ENSG00000072786|ENST00000176763|STK10;ENSG00000077264|ENST00000372007|PAK3;ENSG00000101349|ENST00000353224|PAK5;ENSG00000104814|ENST00000396857|MAP4K1;ENSG00000123572|ENST00000243300|NRK;ENSG00000135090|ENST00000392533|TAOK3;ENSG00000137843|ENST00000560346|PAK6;ENSG00000141503|ENST00000355280|MINK1;ENSG00000149269|ENST00000356341|PAK1;ENSG00000149930|ENST00000308893|TAOK2;ENSG00000154310|ENST00000436636|TNIK;ENSG00000160551|ENST00000261716|TAOK1;ENSG00000168067|ENST00000294066|MAP4K2;ENSG00000176601|ENST00000392915|MAP3K19;ENSG00000180370|ENST00000327134|PAK2;ENST00000476609.1_1_2:102441885-102476398:+|nuORF;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;ENST00000577583.1_1_17:27807410-27838022:+|nuORF;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;nc|ENSG00000011566|Q8IVH8-3|MAP4K3;nc|ENSG00000065613|Q9H2G2-2|SLK;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000077264|O75914-3|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000104814|Q92918|MAP4K1;nc|ENSG00000137843|Q9NQU5-2|PAK6;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1;nc|ENSG00000149269|Q13153-2|PAK1;nc|ENSG00000149930|Q9UL54-2|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;nc|ENSG00000160551|Q7L7X3-2|TAOK1;nc|ENSG00000160551|Q7L7X3-3|TAOK1;nc|ENSG00000168067|Q12851-2|MAP4K2;nc|ENSG00000176601|Q56UN5-3|MAP3K19;nc|ENSG00000176601|Q56UN5-4|MAP3K19;nc|ENSG00000176601|Q56UN5-5|MAP3K19;nc|ENSG00000176601|Q56UN5-7|MAP3K19 39.957323273325 0.0756908302845263 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WTMA 6 5 40.824 0.0 0.0 3.7368 0.0 0.0 0.0 340.1479171342202 340.1479171342202 16.64320017660792 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.7742275032520141 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WTMA 3.7368 - 672 1 1.153 52398.8 1.0 12654 5761 18408 HBL1_DMSO_200M_050219_1,18417 HBL1_DMSO_200M_050219_1,18417,TPYWMAPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18418 88.14 45.0 1675800.0 25 0 169250.0 + 3046 AVLERLVDI 9 104 514.3112368325764 0 514.3109619021416 PEAK CID FTMS 0 0 0 18408 1045142.25 0.467133006064416 2 -0.2052230834960937 10 Unmodified _AVLERLVDI_ ENSG00000160714|ENST00000292211|UBE2Q1;ENST00000497453.1_1_1:154524878-154531400:-|nuORF 45.739877483867886 0.0433205460926695 3 D{I|L}{I|L}{I|L} 4 6 19.897 0.0 0.0 1.9381 0.0 0.0 131.09502298679234 438.2114351861938 569.3064581729861 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 D{I|L}{I|L}{I|L} 1.9381 - 309 + 1 1.153 61624.3 1.0 12655 5761 18408 HBL1_DMSO_200M_050219_1,18418 HBL1_DMSO_200M_050219_1,18418,AVLERLVDI True True AVLERLVDI 88.139772 514.310961902142 23843524.0 18408.0 ENST00000497453.1_1_1:154524878-154531400:-|nuORF;;ENSG00000160714|ENST00000292211|UBE2Q1 3.02827795346578 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18419 88.142 74.0 784910.0 25 0 78898.0 + 34002 SLIRNLEQL 9 83 543.3207946817142 1084.6270364302284 2 543.3196899294853 MULTI CID FTMS 0 0 0 18408 921043.6875 0.2074883259561328 2 -0.2052230834960937 11 Unmodified _SLIRNLEQL_ ENSG00000076944|ENST00000221283|STXBP2;ENST00000593854.5_1_19:7709481-7711320:+|nuORF;ENST00000601061.1_1_19:7710099-7712134:+|nuORF;nc|ENSG00000076944|Q15833-2|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2 65.47368725323818 0.0230515101691092 3 {[TV]|[{I|L}S]}{I|L}RN{I|L}EQ{I|L} 9 0 + 85.187 0.0 0.0 7.8541 7.8541 92.892 0.0 0.0 0.0 20.737862141609185 74.53347055630384 20.737862141609185 9.208187539523747 0 1.610924374808178 2.0 0.3494850021680094 0.0 + + {[TV]|[{I|L}S]}{I|L}RN{I|L}EQ{I|L};{[TV]|[{I|L}S]}{I|L}RGG{I|L}EQ{I|L};{[TV]|[{I|L}S]}{I|L}[VG]N{I|L}EQ{I|L};{[TV]|[{I|L}S]}{I|L}RN{I|L}E[AG]{I|L};{[TV]|[{I|L}S]}{I|L}[VG]GG{I|L}EQ{I|L};{[TV]|[{I|L}S]}{I|L}[VG]N{I|L}E[AG]{I|L};{[TV]|[{I|L}S]}{I|L}RGG{I|L}E[AG]{I|L};{[TV]|[{I|L}S]}{I|L}RD[Q{I|L}]Q{I|L};{[TV]|[{I|L}S]}{I|L}RD[Q{I|L}][AG]{I|L};{[TV]|[{I|L}S]}{I|L}[VG]D[Q{I|L}]Q{I|L} 7.8541;7.0051;7.0051;7.0051;6.1602;6.1602;6.1602;6.1253;5.2763;5.2763 +;-;-;-;-;-;-;-;-;- + 806 1 1.153 50364.6 1.0 12656 5761 18408 HBL1_DMSO_200M_050219_1,18419 HBL1_DMSO_200M_050219_1,18419,SLIRNLEQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18420 88.143 60.0 977670.0 25 0 124240.0 23467 LTGVLGVGLGV 11 97 492.8081054456107 983.6016579580214 2 492.8084899783134 MULTI CID FTMS 0 0 0 18408 907839.5 1.0 0 0.0 12 Unmodified _LTGVLGVGLGV_ ENSG00000169682|ENST00000311008|SPNS1;ENST00000569969.5_2_16:28993554-28995617:+|nuORF;nc|ENSG00000169682|Q9H2V7-2|SPNS1;nc|ENSG00000169682|Q9H2V7-3|SPNS1;nc|ENSG00000169682|Q9H2V7-4|SPNS1 27.628801355627647 0.4434699450731472 3 {[VA]|[{I|L}G]}TVG 5 7 18.552 0.0 0.0 1.8861 0.0 0.0 0.0 553.3348177082745 553.3348177082745 -0.6215034047670152 0.0 -0.6215034047670152 0.0 0 0.0 0.8860566476931632 0.75 0.0 {[VA]|[{I|L}G]}TVG 1.8861 - 291 1 1.153 50910.0 1.0 12657 5761 18408 HBL1_DMSO_200M_050219_1,18420 HBL1_DMSO_200M_050219_1,18420,LTGVLGVGLGV False True ATVVIGGVVAV 88.142989 492.808489978313 14886501.0 18408.0 nc|ENSG00000165949|P40305-1|IFI27 2.0235844453175864 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18421 88.144 49.0 1001200.0 25 0 80815.0 + 14389 KLVGEFLEV 9 77 517.3004782879307 1032.5864036426613 2 517.2998535037041 MULTI CID FTMS 0 0 0 18408 868682.3125 0.2113660181147796 2 -0.2052230834960937 13 Unmodified _IFGLDLKEV_ nc|ENSG00000065427|Q15046-2|KARS1;ENSG00000065427|ENST00000302445|KARS1 25.399314129420983 0.2080152500878129 3 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{I|L}K{I|L}EV 9 4 + 54.149 0.0 0.0 5.244 5.244 83.808 0.0 0.0 0.0 7.901503977643031 41.930310427849264 7.901503977643031 8.413029202116846 0 0.6861818737241735 0.0 0.2215141619232908 0.0 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{I|L}K{I|L}EV;{[QN]|[E{I|L}]|[KN]}[RK]{M(Oxidation (M))|F}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}G[K{I|L}]{M(Oxidation (M))|F}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]K{I|L}EV;[TP]S{M(Oxidation (M))|F}{I|L}K{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DG]{I|L}K{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[RE]|[WV]}K{I|L}EV;[TP]S[K{I|L}]{M(Oxidation (M))|F}{I|L}EV;[{I|L}T][R{M(Oxidation (M))|F}]R{I|L}EV;HH{I|L}K[R{M(Oxidation (M))|F}]PV 5.244;4.4292;4.1817;3.9672;3.8379;3.7966;3.1693;2.7756;2.5862;2.2525 -;-;-;-;-;-;-;-;-;- 250 1 1.153 44056.9 1.0 12658 5761 18408 HBL1_DMSO_200M_050219_1,18421 HBL1_DMSO_200M_050219_1,18421,IFGLDLKEV False False KLVGEFLEV 88.144299 517.299853503704 118400376.0 18408.0 nc|ENSG00000065427|Q15046-2|KARS1;;ENSG00000065427|ENST00000302445|KARS1 3.6766915321350098 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18422 88.146 79.0 531620.0 25 0 72359.0 + 45839 YYPQQAIVF 9 71 564.7896305996712 1127.5647082661424 2 564.7908813357353 MULTI CID FTMS 0 0 0 18408 720634.875 1.0 0 0.0 14 Unmodified _YYPQQAIVF_ ENSG00000184831|ENST00000379226|APOO;nc|ENSG00000184831|Q9BUR5-2|APOO 30.22481116460888 0.1466181017706357 3 {M(Oxidation (M))|F}SA{I|L}YYV{M(Oxidation (M))|F} 8 7 37.083 0.0 0.0 3.2888 0.0 0.0 119.07400710273592 0.0 119.07400710273592 0.0 20.093728280886936 0.0 0.0 0 0.7429928190999391 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}SA{I|L}YYV{M(Oxidation (M))|F} 3.2888 - 156 1 1.153 38999.2 1.0 12659 5761 18408 HBL1_DMSO_200M_050219_1,18422 HBL1_DMSO_200M_050219_1,18422,YYPQQAIVF False True YYPQQAIVF 88.14612 564.790881335735 12454517.0 18408.0 nc|ENSG00000184831|Q9BUR5-2|APOO;;ENSG00000184831|ENST00000379226|APOO 5.364514032999675 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18423 88.148 88.0 785090.0 25 0 79164.0 + + 29161 KTFNLIPAV 9 92 501.8028700175748 1001.5911871019496 2 501.8030578494072 MULTI CID FTMS 0 0 0 18408 622016.125 0.7119673733956737 -2 0.278411865234375 15 Unmodified _QFSKLLPAV_ chr19:10258685-10259838|11|29.64|0.48|5.95|+|2|MRPL4,None|1;ENST00000590702.1_1_19:10369168-10369411:+|nuORF;ENSG00000105364|ENST00000253099|MRPL4;nc|ENSG00000105364|Q9BYD3-2|MRPL4 37.07464296494664 0.0915153923251136 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}TK{I|L}PAV 9 -1 + 51.404 0.0 0.0 5.1323 5.1323 77.035 0.0 0.0 0.0 1.4635903806083306 33.77976940790376 1.4635903806083306 2.6884531229258 0 1.0994850021680094 0.0 0.3252574989159953 0.8494850021680094 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}TK{I|L}PAV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}TK{I|L}PAV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}TK{I|L}{I|L}PAV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T{I|L}K{I|L}PAV;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{I|L}PAV;{[NV]|[RG]}[YV]K{I|L}PAV;[KG][YV]R{I|L}PAV;[{I|L}P][HQ]K{I|L}PAV;[{I|L}A][YQ]K{I|L}PAV;{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L}[KG]V 5.1323;4.8638;4.8559;4.8317;4.7507;4.0306;3.2132;3.0023;2.7808;1.9823 -;-;-;-;-;-;-;-;-;- 387 1 1.153 55184.3 1.0 12660 5761 18408 HBL1_DMSO_200M_050219_1,18423 HBL1_DMSO_200M_050219_1,18423,QFSKLLPAV False False KTFNLIPAV 88.148062 501.803057849407 15774502.0 18408.0 chr19:10258685-10259838|11|29.64|0.48|5.95|+|2|MRPL4,None|1;;ENST00000590702.1_1_19:10369168-10369411:+|nuORF;;ENSG00000105364|ENST00000253099|MRPL4;;nc|ENSG00000105364|Q9BYD3-2|MRPL4 3.735198418299357 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18424 88.15 73.0 800410.0 25 0 72247.0 + 36835 TELGLELASL 10 104 523.2939324251546 0 523.2938720583916 PEAK CID FTMS 0 0 0 18408 631824.875 1.0 0 0.0 16 Unmodified _TELGLELASL_ REV__ENSG00000139697|ENST00000602398|SBNO1;REV__nc|ENSG00000139697|A3KN83-2|SBNO1;REV__nc|ENSG00000139697|A3KN83-3|SBNO1;REV__nc|ENSG00000139697|A3KN83-4|SBNO1 25.399314129420983 0.2547831343944559 3 {I|L}E 2 -1 10.969 0.0 0.0 1.0501 0.0 0.0 198.0763257426863 601.3479708307249 799.4242965734111 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E 1.0501 + + 100 + 1 1.153 51579.9 1.0 12661 5761 18408 HBL1_DMSO_200M_050219_1,18424 HBL1_DMSO_200M_050219_1,18424,TELGLELASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18425 88.152 106.0 973110.0 25 0 85138.0 + 22563 LPWSNPLKV 9 123 527.3082810701694 1052.6020092071387 2 527.3087646365166 MULTI CID FTMS 0 0 0 18408 597489.6875 0.1084413939469782 4 -0.4158554077148437 17 Unmodified _LPWSNPLKV_ ENSG00000134077|ENST00000452837|THUMPD3 59.05245873256422 0.0266066919017776 3 {I|L}PW[NS]P{I|L}KV 9 0 + 58.777 0.0 0.0 5.584 5.584 80.549 0.0 0.0 0.0 15.696017389004858 3.735806628125928 3.735806628125928 3.735806628125928 0 1.548455006504028 1.5228787452803376 0.0 0.2614393726401688 + + {I|L}PW[NS]P{I|L}KV;{I|L}PW[NS]P{I|L}VK;{I|L}P{M(Oxidation (M))|F}[TP][HK]T{I|L};{I|L}[{I|L}T]K{I|L}[NS]QH;YY{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV];[{I|L}P][DN]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV];{NN|[MP]|[D{I|L}]|[EV]}[NP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV];[{I|L}P][NS][RK]{I|L}[EP];{I|L}M{I|L}[TP][HK]T{I|L} 5.584;5.2291;2.6865;2.6837;1.6543;0.84209;0.58575;0.40638;0.16842 +;-;-;-;-;-;-;-;- + 796 + 1 1.153 88544.6 1.0 12662 5761 18408 HBL1_DMSO_200M_050219_1,18425 HBL1_DMSO_200M_050219_1,18425,LPWSNPLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18426 88.154 64.0 646680.0 25 0 48499.0 + 24782 MPIIWLFAL 9 57 552.3177280993688 1102.6209032655374 2 552.3180419802666 MULTI CID FTMS 0 0 0 18408 590877.9375 0.224471386047646 2 -0.2052230834960937 18 Unmodified _MPIIWLFAL_ REV__nc|ENSG00000138347|Q86TC9-2|MYPN 28.17323086031832 0.1727213568982648 3 MP{I|L}{I|L}T 5 -1 60.191 0.0 0.0 5.4589 0.0 0.0 0.0 544.2898885063892 544.2898885063892 32.74350030035414 0.0 0.0 0.0 0 0.8252574989159953 1.3979400086720375 0.0 0.0 MP{I|L}{I|L}T 5.4589 - 91 + 1 1.153 41850.7 1.0 12663 5761 18408 HBL1_DMSO_200M_050219_1,18426 HBL1_DMSO_200M_050219_1,18426,MPIIWLFAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18427 88.158 221.0 737290.0 25 0 92981.0 + 9180 FGGVLILIHR 10 107 375.5692990116058 1123.6860676350177 3 375.5692016482353 MULTI CID FTMS 0 0 0 18408 420601.78125 0.0117520461005166 -9 0.9542694091796876 19 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 54.773552608820026 0.052133998764723 3 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 99.476 0.0 0.0 8.8527 8.8527 94.321 0.0 0.0 0.0 84.15411219011405 25.49907306015541 25.49907306015541 9.208187539523747 0 1.1549471895720984 2.0 0.0 1.9333245082789776 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 8.8527;8.0332 -;- 189 + 1 1.153 134366.1 1.0 12664 5761 18408 HBL1_DMSO_200M_050219_1,18427 HBL1_DMSO_200M_050219_1,18427,FGGVLILIHR True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18428 88.167 541.0 580700.0 25 0 45273.0 + 25264 MVTSMMIQV 9 233 520.2529468214284 1038.4913407096567 2 520.2540161013603 MULTI CID FTMS 0 0 0 18408 418605.3125 1.0 0 0.0 20 Unmodified _MVTSMMIQV_ ENSG00000167515|ENST00000696289|TRAPPC2L;ENST00000563514.1_1_16:88926246-88927364:+|nuORF;ENST00000565205.5_1_16:88925858-88927364:+|nuORF;ENST00000565504.5_1_16:88927163-88927364:+|nuORF;nc|ENSG00000167515|Q9UL33|TRAPPC2L 42.09456458481378 0.0639583784996157 3 {I|L}MVM[WD] 6 7 17.819 0.0 0.0 1.7158 0.0 0.0 245.1222133676629 0.0 245.1222133676629 0.0 4.324098827821235 0.0 0.0 0 0.0 0.0 1.4876954943324543 0.0 {I|L}MVM[WD] 1.7158 - 1187 + 1 1.153 233854.1 1.0 12665 5761 18408 HBL1_DMSO_200M_050219_1,18428 HBL1_DMSO_200M_050219_1,18428,MVTSMMIQV True True MVTSMMIQV 88.167283 520.25401610136 2643785.25 18408.0 ENST00000565504.5_1_16:88927163-88927364:+|nuORF;;ENSG00000167515|ENST00000696289|TRAPPC2L;;ENST00000565205.5_1_16:88925858-88927364:+|nuORF;;ENST00000563514.1_1_16:88926246-88927364:+|nuORF;;nc|ENSG00000167515|Q9UL33|TRAPPC2L 6.185004711151123 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18430 88.172 162.0 285080.0 25 0 19477.0 + -1 RVVDTFQDYF 10 74 644.9786223670937 1931.914037701481 3 644.9795410037041 MULTI CID FTMS 0 0 0 18429 349598.625 0.8043164307972903 1 -0.1627960205078125 1 ENSG00000070718|ENST00000396926|AP3M2;nc|ENSG00000070718|P53677-2|AP3M2 3 {[TV]|[{I|L}S]}A[W{I|L}]{M(Oxidation (M))|F}QDYS 10 -1 29.006 0.0 0.0 1.5014 0.0 0.0 0.0 718.3502919341562 718.3502919341562 15.511613419313832 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[TV]|[{I|L}S]}A[W{I|L}]{M(Oxidation (M))|F}QDYS 1.5014 - 474 1 1.153 45229.4 1.0 12666 5762 18429 HBL1_DMSO_200M_050219_1,18430 HBL1_DMSO_200M_050219_1,18430, False False RVVDTFQDYF 88.172447 644.979541003704 6719754.0 18429.0 ENSG00000070718|ENST00000396926|AP3M2;;nc|ENSG00000070718|P53677-2|AP3M2 3.5572780768076577 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18431 88.181 510.0 244120.0 25 0 54044.0 -1 0 61 1173.1676245175986 3516.481044152996 3 1173.836718738079 MULTI CID FTMS 0 0 0 18429 624798.9375 0.03135703089265 7 -0.7330169677734375 2 3 {M(Oxidation (M))|F}Y 2 -1 10.969 0.0 0.0 0.31193 0.0 0.0 1310.4470608539712 1892.8826369074325 3203.329697761404 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.31193 - 31 + 1 1.153 104996.8 1.0 12667 5762 18429 HBL1_DMSO_200M_050219_1,18431 HBL1_DMSO_200M_050219_1,18431, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18432 88.184 151.0 663380.0 25 0 82692.0 + 18492 KYNIMLVRL 9 86 383.8984755830074 1148.6735973492223 3 383.8984557986259 MULTI CID FTMS 0 0 0 18429 894828.875 1.0 0 0.0 3 Unmodified _KYNIMLVRL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 34.93206674587334 0.1032771302489716 3 [YN]K{I|L}M{I|L}{I|L}VR 9 4 [YN]K{I|L} + + 40.617 24.253 4.6794 3.536 3.536 51.335 0.0 0.0 0.0 0.0 12.665441213737196 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.2614393726401688 [YN]K{I|L}M{I|L}{I|L}VR 3.536 - 245 + 1 1.153 84964.1 1.0 12668 5762 18429 HBL1_DMSO_200M_050219_1,18432 HBL1_DMSO_200M_050219_1,18432,KYNIMLVRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18433 88.186 29.0 1501800.0 25 0 208010.0 + 35964 SVPVTQHEPV 10 73 546.7872492726259 1091.5599456120517 2 546.7873412966728 MULTI CID FTMS 0 0 0 18429 825184.8125 0.6269491377011391 -1 0.0424270629882812 4 Unmodified _SVPVTQHEPV_ REV__nc|ENSG00000211821|A0JD36|TRDV2 13.90604991867851 0.6142120002215601 3 [VS]ND{I|L}{M(Oxidation (M))|F}E[R{I|L}] 9 -1 + 74.186 0.0 0.0 6.7964 6.7964 89.29 0.0 0.0 0.0 59.58220305641312 7.147642715192504 7.147642715192504 9.018637558036673 0 0.4247425010840047 2.0 0.4247425010840047 0.3807196863200844 [VS]ND{I|L}{M(Oxidation (M))|F}E[R{I|L}];[VS]ND{I|L}{M(Oxidation (M))|F}[W{I|L}]V;[VS]GGD{I|L}{M(Oxidation (M))|F}E[R{I|L}];[VS]GGD{I|L}{M(Oxidation (M))|F}[W{I|L}]V;[VS]{[SA]|[TG]}[PS]{M(Oxidation (M))|F}E[R{I|L}] 6.7964;5.9701;5.9528;4.7778;4.0737 -;-;-;-;- 139 + 1 1.153 39676.6 1.0 12669 5762 18429 HBL1_DMSO_200M_050219_1,18433 HBL1_DMSO_200M_050219_1,18433,SVPVTQHEPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18434 88.187 63.0 690170.0 25 0 93045.0 + 17917 KQVEEIFNL 9 75 560.3056738747159 1118.5967948162315 2 560.3056518435478 MULTI CID FTMS 0 0 0 18429 643519.125 0.1386478572971365 3 -0.3734283447265625 5 Unmodified _KQVEEIFNL_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 32.78568957990786 0.1150597335874693 3 {NN|[MP]|[D{I|L}]|[EV]}[KQ]E{I|L}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]} 9 4 + 44.089 0.0 0.0 3.9415 3.9415 73.132 0.0 0.0 0.0 2.495367849778773 0.7378621416091846 0.7378621416091846 2.495367849778773 0 0.0 1.0969100130080565 0.8494850021680094 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}[KQ]E{I|L}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}[KQ]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}KD[KQ]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]};[KA][VG]EE{I|L}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV][KQ]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]};[{M(Oxidation (M))|F}V][HS][KQ]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]} 3.9415;3.7184;2.5812;2.3581;2.072;1.6198;0.31393 -;-;-;-;-;-;- 149 1 1.153 40008.5 1.0 12670 5762 18429 HBL1_DMSO_200M_050219_1,18434 HBL1_DMSO_200M_050219_1,18434,KQVEEIFNL True True KQVEEIFNL 88.187197 560.305651843548 94427344.0 18429.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 4.293234586715698 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18435 88.191 206.0 546480.0 25 0 74643.0 + 43958 YGYEHILTL 9 121 554.7868325523943 1107.5591121715886 2 554.7865478396416 MULTI CID FTMS 0 0 0 18429 455251.15625 0.5472025617188307 -1 0.0424270629882812 6 Unmodified _YGYEHILTL_ ENSG00000139719|ENST00000267199|VPS33A 48.345845343767074 0.0439967357579942 3 {[YC]|[HE]}YG{I|L}{I|L}T{I|L}Y 9 4 + 53.739 0.0 0.0 4.852 4.852 79.286 0.0 0.0 0.0 3.00907468880581 -2.669379460667109 -2.669379460667109 4.771212547196626 0 0.3494850021680094 0.0 0.6421590589602533 0.0 {[YC]|[HE]}YG{I|L}{I|L}T{I|L}Y;{[YC]|[HE]}Y{I|L}G{I|L}T{I|L}Y;[H{I|L}]EYG{I|L}T{I|L}Y;{[YC]|[HE]}YGY{I|L}{I|L}T{I|L};{[YC]|[HE]}Y{I|L}{I|L}GT{I|L}Y;[H{I|L}]EY{I|L}GT{I|L}Y;{[YC]|[HE]}YG{I|L}Y{I|L}T{I|L};{[YC]|[HE]}{I|L}YG{I|L}T{I|L}Y;{[YC]|[HE]}YGY{I|L}T{I|L}{I|L};{[YC]|[HE]}{I|L}Y{I|L}GT{I|L}Y 4.852;4.4212;4.3481;4.2749;4.1494;4.0763;4.0031;3.9904;3.7516;3.7186 -;-;-;-;-;-;-;-;-;- 1223 1 1.153 89390.0 1.0 12671 5762 18429 HBL1_DMSO_200M_050219_1,18435 HBL1_DMSO_200M_050219_1,18435,YGYEHILTL True True YGYEHILTL 88.191128 554.786547839642 6938399.0 18429.0 ENSG00000139719|ENST00000267199|VPS33A 4.925385157267253 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18436 88.199 438.0 447160.0 25 0 186820.0 + 10985 GARGPAGK 8 97 713.4081835722365 712.4009071056364 1 713.4078857302666 MULTI CID FTMS 0 0 0 18429 427245.40625 0.8043720964602659 -1 0.0424270629882812 7 Unmodified _GARGPAGK_ REV__ENSG00000134871|ENST00000360467|COL4A2 0.7936320650641473 0.8195151834710337 3 {[QN]|[E{I|L}]|[KN]}{I|L}PE{I|L} 6 -1 + 61.929 0.0 0.0 8.6929 8.6929 91.206 0.0 0.0 0.0 9.005149978319906 12.587418566968154 9.005149978319906 6.49166239860314 0 1.7059771852360797 1.3010299956639813 0.5994850021680094 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}PE{I|L};{[QN]|[E{I|L}]|[KN]}P{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}PE{I|L}{I|L};[EP]{I|L}{I|L}E{I|L};[EP]{I|L}E{I|L}{I|L};[{I|L}P]E{I|L}E{I|L};[{I|L}P]EE{I|L}{I|L} 8.6929;7.7817;7.4945;7.4289;7.1416;4.7524;4.4652 -;-;-;-;-;-;- 107 1 1.153 143504.4 1.0 12672 5762 18429 HBL1_DMSO_200M_050219_1,18436 HBL1_DMSO_200M_050219_1,18436,GARGPAGK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18437 88.201 85.0 1042300.0 25 0 112100.0 + 44700 YPFTLRVV 8 115 497.7900750887261 993.565597244252 2 497.7905761599541 MULTI CID FTMS 0 0 0 18429 389589.6875 1.0 0 0.0 8 Unmodified _YPFTLRVV_ ENSG00000129204|ENST00000574788|USP6;ENSG00000170832|ENST00000300896|USP32;ENST00000575709.5_1_17:5042349-5076270:+|nuORF;nc|ENSG00000129204|P35125-2|USP6 20.453626601364224 0.6087503291685402 3 YP{M(Oxidation (M))|F}T 4 4 58.175 0.0 0.0 5.8552 0.0 0.0 0.0 482.31003748111567 482.31003748111567 35.09073725451536 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.4247425010840047 0.0 + YP{M(Oxidation (M))|F}T 5.8552 + + 324 + 1 1.153 74422.5 1.0 12673 5762 18429 HBL1_DMSO_200M_050219_1,18437 HBL1_DMSO_200M_050219_1,18437,YPFTLRVV False True YPFTLRVV 88.200834 497.790576159954 3182781.0 18429.0 ENSG00000170832|ENST00000300896|USP32;;nc|ENSG00000129204|P35125-2|USP6;;ENSG00000129204|ENST00000574788|USP6;;ENST00000575709.5_1_17:5042349-5076270:+|nuORF -0.348531166712443 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18438 88.204 186.0 478970.0 25 0 39858.0 + 24079 LYFLQKVAY 9 111 572.8236473329758 1143.6327417327516 2 572.8239623904228 MULTI CID FTMS 0 0 0 18429 287809.0625 1.0 0 0.0 9 Unmodified _LYFLQKVAY_ ENST00000044462.11_1_15:78832812-78834893:+|nuORF;ENST00000559082.5_1_15:78832772-78834893:+|nuORF 44.40701690623563 0.0526327925666318 3 [Y{I|L}]{M(Oxidation (M))|F}{I|L}Q 5 4 47.945 0.0 0.0 4.1924 0.0 0.0 0.0 476.2510470026001 476.2510470026001 20.24990519418168 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.3252574989159953 + [Y{I|L}]{M(Oxidation (M))|F}{I|L}Q 4.1924 + + 879 + 1 1.153 70134.4 1.0 12674 5762 18429 HBL1_DMSO_200M_050219_1,18438 HBL1_DMSO_200M_050219_1,18438,LYFLQKVAY True True LYFLQKVAY 88.204439 572.823962390423 2821857.75 18429.0 ENST00000044462.11_1_15:78832812-78834893:+|nuORF;;ENST00000559082.5_1_15:78832772-78834893:+|nuORF 6.21467399597168 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18439 88.214 565.0 390700.0 25 0 30671.0 + -1 VEKIYRCDD 9 175 599.2841710467626 1196.553789160325 2 599.2851440310478 MULTI CID FTMS 0 0 0 18429 287713.0625 1.0 0 0.0 10 Carbamidomethyl (C) _VEKIYRC(Carbamidomethyl (C))DD_ REV__ENSG00000270379|ENST00000604834|HEATR9;REV__nc|ENSG00000270379|A2RTY3-2|HEATR9;REV__nc|ENSG00000270379|A2RTY3-4|HEATR9 14.838274106304384 0.4350285940865338 3 [VG]VT{I|L}ECD{M(Oxidation (M))|F}SQ 11 -1 + 49.15 0.0 0.0 4.1076 4.1076 71.173 0.0 0.0 0.0 2.958494831601989 7.5363090677130415 2.958494831601989 0.9813624419633272 0 0.1171302707394362 1.3979400086720375 1.1989700043360187 0.0 [VG]VT{I|L}ECD{M(Oxidation (M))|F}SQ;[VG]V{I|L}TECD{M(Oxidation (M))|F}SQ;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}ECD{M(Oxidation (M))|F}SQ;[{I|L}V]KEECD{M(Oxidation (M))|F}SQ;[VG]VT{I|L}EC[WY]Q;[{I|L}V][SG]{I|L}ECD{M(Oxidation (M))|F}SQ;{[TV]|[{I|L}S]}[VG]{I|L}ECD{M(Oxidation (M))|F}SQ;[VG]V{I|L}TEC[WY]Q;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}EC{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DQ;[VG]VT{I|L}EC{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DQ 4.1076;4.0256;3.8604;3.0853;2.9805;2.9473;2.9473;2.8984;2.8877;2.8797 -;-;-;-;-;-;-;-;-;- 7346 1 1.153 164784.1 1.0 12675 5762 18429 HBL1_DMSO_200M_050219_1,18439 HBL1_DMSO_200M_050219_1,18439,VEKIYRCDD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18440 88.227 728.0 348380.0 25 0 24214.0 + 42103 VRKVLEKRIGD 11 203 438.2743433902932 1311.8012007710795 3 438.2745544314384 MULTI CID FTMS 0 0 0 18429 256716.546875 0.3673314924419835 9 -0.920745849609375 11 Unmodified _VRKVLEKRIGD_ REV__ENSG00000164961|ENST00000318410|WASHC5 20.41453444215458 0.6105011870913812 3 [RP]{I|L}VQA{I|L}P{M(Oxidation (M))|F} 9 -1 30.435 0.0 0.0 2.3201 0.0 0.0 0.0 287.1698070795946 287.1698070795946 16.647986816278674 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 1.0948098775014483 [RP]{I|L}VQA{I|L}P{M(Oxidation (M))|F} 2.3201 - 1458 1 1.153 212881.4 1.0 12676 5762 18429 HBL1_DMSO_200M_050219_1,18440 HBL1_DMSO_200M_050219_1,18440,VRKVLEKRIGD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18441 88.237 592.0 394420.0 25 0 27929.0 + 22440 LPTPEARVRT 10 188 570.3313062971336 1138.648059661067 2 570.3306152224541 MULTI CID FTMS 0 0 0 18429 262424.21875 0.1559727433959157 -5 0.521331787109375 12 Unmodified _LPTPEARVRT_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 15.847184025352805 0.5816416552707754 3 [{I|L}P]T{I|L}P{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]} 11 -1 + 42.484 0.0 0.0 3.7311 3.7311 71.034 0.0 0.0 0.0 1.5217244496362028 5.879330136038277 1.5217244496362028 1.5217244496362028 0 0.5 0.8860566476931632 1.4634679910804405 0.0 [{I|L}P]T{I|L}P{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]};[TP]{I|L}{I|L}P{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]};[{I|L}P]T{I|L}{[MG]|[TS]}{I|L}P{I|L}{[QG]|[NA]};[TP]{I|L}{I|L}{[MG]|[TS]}{I|L}P{I|L}{[QG]|[NA]};[{I|L}P]{I|L}TP{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]};[{I|L}T]P{I|L}P{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]};[{I|L}P]{I|L}T{[MG]|[TS]}{I|L}P{I|L}{[QG]|[NA]};[{I|L}P]T{I|L}PCVV{I|L}{[QG]|[NA]};[{I|L}T]P{I|L}{[MG]|[TS]}{I|L}P{I|L}{[QG]|[NA]};[{I|L}P]TP{I|L}{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]} 3.7311;3.5974;3.5472;3.4136;3.2034;3.0827;3.0196;2.9167;2.8989;2.798 -;-;-;-;-;-;-;-;-;- 2275 1 1.153 176874.5 1.0 12677 5762 18429 HBL1_DMSO_200M_050219_1,18441 HBL1_DMSO_200M_050219_1,18441,LPTPEARVRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18442 88.248 528.0 172200.0 25 0 5733.2 -1 0 121 927.4467631199274 1852.8789733066544 2 927.9488403201104 MULTI CID FTMS 0 0 0 18429 255853.96875 1.0 0 0.0 13 3 [TA]{I|L}D{I|L}{I|L}A 7 -1 49.033 0.0 0.0 2.6463 0.0 0.0 0.0 1152.4510917971422 1152.4510917971422 7.787494952434308 0.0 0.0 0.0 0 0.5 1.0969100130080565 1.2614393726401687 0.0 [TA]{I|L}D{I|L}{I|L}A 2.6463 - 6749 1 1.153 64343.9 1.0 12678 5762 18429 HBL1_DMSO_200M_050219_1,18442 HBL1_DMSO_200M_050219_1,18442, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18443 88.261 754.0 434590.0 25 0 46515.0 + 34823 SQFPGAITL 9 226 467.2553476162436 932.4961422992872 2 467.2550536990166 MULTI CID FTMS 0 0 0 18429 222493.203125 0.426217747890008 6 -0.6461944580078125 14 Unmodified _SQFPGAITL_ ENST00000263083.10_1_17:1944800-1946395:+|nuORF;ENST00000571710.5_1_17:1945525-1946395:+|nuORF;nc|ENSG00000262664|Q8WZ82|OVCA2 60.07390631473393 0.0260411565414776 3 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L} 8 2 + 39.466 0.0 0.0 4.2323 4.2323 70.638 0.0 0.0 0.0 0.4852113940402347 7.786596949921218 0.4852113940402347 0.4852113940402347 0 1.1435078169319297 0.6777807052660807 1.1397727294836957 0.2742275032520141 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L};[{I|L}T]QP{M(Oxidation (M))|F}NT{I|L};{[VA]|[{I|L}G]}MA{I|L}TNT{I|L};[{I|L}T]QPN{M(Oxidation (M))|F}T{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}[PG]A{I|L}T{I|L};{[VA]|[{I|L}G]}APT{M(Oxidation (M))|F}NT{I|L};[QP]{I|L}T{M(Oxidation (M))|F}NT{I|L};{[VA]|[{I|L}G]}AM{I|L}TNT{I|L};{[VA]|[{I|L}G]}AP{M(Oxidation (M))|F}TNT{I|L};[QP]{I|L}{M(Oxidation (M))|F}TNT{I|L} 4.2323;4.1803;3.9301;3.9181;3.8546;3.5889;3.5771;3.5034;3.5034;3.4916 -;-;-;-;+;-;-;-;-;- + 3300 1 1.153 249376.0 1.0 12679 5762 18429 HBL1_DMSO_200M_050219_1,18443 HBL1_DMSO_200M_050219_1,18443,SQFPGAITL True True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 18444 88.274 739.0 319480.0 25 0 23402.0 + 12369 GTFDNIYLHV 10 210 589.7953098073901 1177.5760666815802 2 589.7925903201103 MULTI CID FTMS 0 0 0 18429 218335.09375 0.2328676972401267 -3 0.3208389282226562 15 Unmodified _GTFDNIYLHV_ ENSG00000121579|ENST00000240922|NAA50 25.399314129420983 0.3980215340001851 3 {I|L}{I|L}DEQ{I|L}{I|L} 7 8 49.564 0.0 0.0 4.209 0.0 0.0 0.0 350.0913004064427 350.0913004064427 24.540474330738896 0.0 0.0 0.0 0 0.5283773187068795 2.0 0.6237125054200234 0.6139829889124311 {I|L}{I|L}DEQ{I|L}{I|L} 4.209 - 4819 1 1.153 172975.6 1.0 12680 5762 18429 HBL1_DMSO_200M_050219_1,18444 HBL1_DMSO_200M_050219_1,18444,GTFDNIYLHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18445 88.288 730.0 327580.0 25 0 30775.0 + 31726 RRRRSRQRQRY 11 239 539.985249298134 1616.933918494602 3 540.3185302615166 MULTI CID FTMS 0 0 0 18429 209233.421875 1.0 0 0.0 16 Unmodified _RRRRSRQRQRY_ REV__ENSG00000175646|ENST00000312511|PRM1 0.0 0.8751479354844584 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AN{I|L} 7 -1 26.238 0.0 0.0 1.6227 0.0 0.0 0.0 793.5352728249333 793.5352728249333 3.789121230682863 0.0 0.0 0.0 0 0.0 0.5686362358410126 0.0 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AN{I|L} 1.6227 - 1789 1 1.153 186756.5 1.0 12681 5762 18429 HBL1_DMSO_200M_050219_1,18445 HBL1_DMSO_200M_050219_1,18445,RRRRSRQRQRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18446 88.294 378.0 262390.0 25 0 36121.0 + + 30633 TLMTLNTHSLLA 12 138 657.8592956215195 1313.704038309839 2 657.8614379763603 MULTI CID FTMS 0 0 0 18429 193150.3125 0.9098868553816176 -1 0.0424270629882812 17 Unmodified _RFMLRAHAEAL_ ENSG00000212907|ENST00000361335|MT-ND4L 18.373094154950223 0.6529654022026722 3 [{I|L}T]MT[HN]S{I|L}{I|L}TA{I|L} 12 -1 + 67.453 0.0 0.0 5.1346 5.1346 78.602 0.0 0.0 0.0 10.598430490121842 3.4948500216800937 3.4948500216800937 3.4948500216800937 0 1.7797966019298022 2.0 1.834121882396211 0.3054621874040891 [{I|L}T]MT[HN]S{I|L}{I|L}TA{I|L};[{I|L}T]MT[HN]S{I|L}{I|L}AT{I|L};[{I|L}T]MT[HN]S{I|L}T{I|L}A{I|L};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}[HN]S{I|L}{I|L}TA{I|L};[{I|L}T]M{[QD]|[EN]|[WG]|[KD]|[RS]}VVD{I|L}PA{I|L};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}[HN]S{I|L}{I|L}AT{I|L};[{I|L}T]M{[QD]|[EN]|[WG]|[KD]|[RS]}RRNPA{I|L};[{I|L}T][QA][HC]M{I|L}{I|L}TA{I|L};{[TV]|[{I|L}S]}VN[HC]M{I|L}{I|L}TA{I|L};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}[HN]S{I|L}T{I|L}A{I|L} 5.1346;4.8686;4.7345;4.3278;4.2697;4.0618;4.017;4.0084;3.9589;3.9278 -;-;-;-;-;-;-;-;-;- 4983 1 1.153 79640.2 1.0 12682 5762 18429 HBL1_DMSO_200M_050219_1,18446 HBL1_DMSO_200M_050219_1,18446,RFMLRAHAEAL False False TLMTLNTHSLLA 88.29435 657.86143797636 1101681.875 18429.0 ENSG00000212907|ENST00000361335|MT-ND4L 4.9063131014506025 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18447 88.308 800.0 210970.0 25 0 6769.7 -1 0 150 958.960122720601 1915.905692508002 2 959.9537231326104 MULTI CID FTMS 0 0 0 18429 178127.15625 0.2804703203995108 -5 0.521331787109375 18 3 EY{M(Oxidation (M))|F}ADQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 13 -1 53.423 0.0 0.0 2.7884 0.0 0.0 228.1710231875305 0.0 228.1710231875305 0.0 38.59829986227332 0.0 0.0 0 0.0 0.0 0.0 1.1989700043360187 EY{M(Oxidation (M))|F}ADQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 2.7884 - 13212 + 1 1.153 112133.6 0.7300000190734863 12683 5762 18429 HBL1_DMSO_200M_050219_1,18447 HBL1_DMSO_200M_050219_1,18447, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18448 88.318 458.0 197320.0 25 0 19606.0 -1 EQYHFCYDIV 10 144 687.2968398605238 1372.5791267878476 2 687.2963134646416 MULTI CID FTMS 0 0 0 18429 148545.65625 0.4624144037504757 -1 0.0424270629882812 19 Carbamidomethyl (C) _EQYHFC(Carbamidomethyl (C))YDIV_ ENSG00000204179|ENST00000374339|PTPN20;ENST00000504747.1_10:48738623-48827915:-|nuORF;nc|ENSG00000204179|Q4JDL3-10|PTPN20;nc|ENSG00000204179|Q4JDL3-11|PTPN20;nc|ENSG00000204179|Q4JDL3-2|PTPN20;nc|ENSG00000204179|Q4JDL3-3|PTPN20;nc|ENSG00000204179|Q4JDL3-4|PTPN20;nc|ENSG00000204179|Q4JDL3-5|PTPN20;nc|ENSG00000204179|Q4JDL3-6|PTPN20 17.11289562659939 0.5604042439455784 3 YQEV[{I|L}V] 6 -1 34.046 0.0 0.0 2.4805 0.0 0.0 623.1872425763687 0.0 623.1872425763687 0.0 4.353415603609747 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.8807196863200843 YQEV[{I|L}V] 2.4805 - 733 1 1.153 74041.6 1.0 12684 5762 18429 HBL1_DMSO_200M_050219_1,18448 HBL1_DMSO_200M_050219_1,18448,EQYHFCYDIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18449 88.33 720.0 82108.0 25 0 5440.5 -1 0 104 778.6924297698931 2333.055459909879 3 779.0264160037041 MULTI CID FTMS 0 0 0 18429 147341.8125 1.0 0 0.0 20 3 ET{I|L}ED{I|L}[K{I|L}] 8 -1 23.018 0.0 0.0 0.98661 0.0 0.0 1373.5367353999166 0.0 1373.5367353999166 0.0 3.096602175086982 0.0 0.0 0 0.0 0.0 0.0 0.1694451763165201 ET{I|L}ED{I|L}[K{I|L}] 0.98661 - 249 + 1 1.153 55600.2 1.0 12685 5762 18429 HBL1_DMSO_200M_050219_1,18449 HBL1_DMSO_200M_050219_1,18449, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18451 88.334 1.4 43594000.0 25 0 7006500.0 + 45753 YYISPRLTF 9 44 580.3108966406983 1158.6072403481965 2 580.3116332888603 MULTI CID FTMS 0 0 0 18450 35372952.0 1.0 0 0.0 1 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 17.11289562659939 0.3734572693229295 3 YY{I|L}S 4 5 56.186 0.0 0.0 4.8494 0.0 0.0 0.0 629.3421580656623 629.3421580656623 44.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YY{I|L}S 4.8494 + + 21 + 1 1.162 54107.4 1.0 12686 5763 18450 HBL1_DMSO_200M_050219_1,18451 HBL1_DMSO_200M_050219_1,18451,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18452 88.335 3.4 16496000.0 25 0 2387800.0 + 25590 NFIEKVEAL 9 71 531.7952446517659 1061.5759363703316 2 531.7956420779228 MULTI CID FTMS 0 0 0 18450 13174918.0 0.628609181482294 1 -0.1200485229492187 2 Unmodified _NFIEKVEAL_ ENSG00000092201|ENST00000216297|SUPT16H 56.17704186161178 0.0281986971544335 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}A{M(Oxidation (M))|F}{I|L}SR 9 7 + 52.928 0.0 0.0 4.9858 4.9858 80.049 0.0 0.0 0.0 13.74561638267224 3.583041560618696 3.583041560618696 5.013487579716767 0 1.1237125054200234 0.0 1.9049471895720984 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}A{M(Oxidation (M))|F}{I|L}SR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VA{M(Oxidation (M))|F}{I|L}SR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VA{I|L}{M(Oxidation (M))|F}{I|L}SR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}G{I|L}{M(Oxidation (M))|F}{I|L}SR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}EA{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}AE{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VEA{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEA{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAE{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VE{I|L}A{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 4.9858;4.5135;4.1362;3.664;3.368;2.9186;2.8957;2.7274;2.6818;2.5641 -;-;-;-;-;-;-;-;-;- 503 1 1.162 51370.9 1.0 12687 5763 18450 HBL1_DMSO_200M_050219_1,18452 HBL1_DMSO_200M_050219_1,18452,NFIEKVEAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18453 88.337 12.0 4777100.0 25 0 767940.0 + 13705 HQLENLSNFI 10 77 607.8118489992056 1213.6091450652111 2 607.8121215701103 MULTI CID FTMS 0 0 0 18450 3968258.5 0.6306819161595754 1 -0.1200485229492187 3 Unmodified _HQLENLSNFI_ ENSG00000064666|ENST00000263097|CNN2;ENST00000443067.1_1_1:166765603-166766044:+|nuORF;nc|ENSG00000064666|Q99439-2|CNN2 71.70789743142352 0.0188816056000227 3 [HQ]{I|L}EN{I|L}SN{M(Oxidation (M))|F}{I|L} 10 0 + 91.257 0.0 0.0 7.5195 7.5195 91.526 0.0 0.0 0.0 8.652092201007065 80.46006953869475 8.652092201007065 9.164539485499247 0 1.2134679910804405 0.0 1.3494850021680094 1.0501648626366045 + + [HQ]{I|L}EN{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EN{I|L}SGG{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EGG{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EGG{I|L}SGG{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{M(Oxidation (M))|F}V]N{I|L}SN{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{M(Oxidation (M))|F}V]GG{I|L}SN{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{M(Oxidation (M))|F}V]N{I|L}SGG{M(Oxidation (M))|F}{I|L};[HQ]{I|L}E[KA]DN{M(Oxidation (M))|F}{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}[YE]{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}E[KA]DGG{M(Oxidation (M))|F}{I|L} 7.5195;6.7643;6.7643;6.0121;5.9846;5.2294;5.2294;4.9608;4.4969;4.2056 +;-;-;-;-;-;-;-;-;- + 490 1 1.162 47726.4 1.0 12688 5763 18450 HBL1_DMSO_200M_050219_1,18453 HBL1_DMSO_200M_050219_1,18453,HQLENLSNFI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18454 88.338 21.0 2470900.0 25 0 690750.0 + -1 VAAYSFCSL 9 72 509.2405049319326 1016.4664569306652 2 509.2411071658134 MULTI CID FTMS 0 0 0 18450 2277612.0 1.0 0 0.0 4 Carbamidomethyl (C) _VAAYSFC(Carbamidomethyl (C))SL_ REV__ENSG00000189181|ENST00000342623|OR14I1 7.910154910731844 0.6385446671287552 3 [Q{I|L}][DP]{I|L}P 6 -1 14.538 0.0 0.0 1.4302 0.0 0.0 0.0 350.0842379205688 350.0842379205688 1.0430311173319513 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [Q{I|L}][DP]{I|L}P 1.4302 - 42 + 1 1.162 44884.9 1.0 12689 5763 18450 HBL1_DMSO_200M_050219_1,18454 HBL1_DMSO_200M_050219_1,18454,VAAYSFCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18455 88.339 17.0 3041800.0 25 0 239540.0 + 29605 QLVRDLLEV 9 75 542.8220182635556 0 542.8219482302666 PEAK CID FTMS 0 0 0 18450 2269118.0 0.5107487437055854 -1 0.1627960205078125 5 Unmodified _QLVRDLLEV_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 99.79894945604345 0.0288293043136998 3 Q{I|L}{I|L} 3 6 16.198 0.0 0.0 1.4948 0.0 0.0 135.08834802530708 591.2888878379114 726.3772358632184 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L}{I|L} 1.4948 - 38 + 1 1.162 47749.6 1.0 12690 5763 18450 HBL1_DMSO_200M_050219_1,18455 HBL1_DMSO_200M_050219_1,18455,QLVRDLLEV True True QLVRDLLEV 88.338996 542.821948230267 122924652.0 18450.0 ENSG00000109320|ENST00000226574|NFKB1;;nc|ENSG00000109320|P19838|NFKB1;;nc|ENSG00000109320|P19838-3|NFKB1 5.6515577634175616 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18456 88.34 18.0 2195700.0 25 0 211330.0 + 16826 KIADFGWSV 9 69 511.76786363799 1021.52117434278 2 511.7678710818291 MULTI CID FTMS 0 0 0 18450 2109830.5 1.0 0 0.0 6 Unmodified _KIADFGWSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;ENSG00000087586|ENST00000395915|AURKA;ENSG00000105146|ENST00000302804|AURKC;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000105146|Q9UQB9-2|AURKC;nc|ENSG00000105146|Q9UQB9-3|AURKC;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 20.41453444215458 0.284085796332423 3 D{M(Oxidation (M))|F}GWW 5 5 35.177 0.0 0.0 3.4436 0.0 0.0 312.21650893379064 0.0 312.21650893379064 0.0 19.69273760456403 0.0 0.0 0 0.5 0.0 0.0 0.0 D{M(Oxidation (M))|F}GWW 3.4436 - 66 1 1.162 37801.5 1.0 12691 5763 18450 HBL1_DMSO_200M_050219_1,18456 HBL1_DMSO_200M_050219_1,18456,KIADFGWSV False True KIADFGWSV 88.340175 511.767871081829 30661526.0 18450.0 nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;ENSG00000105146|ENST00000302804|AURKC;;nc|ENSG00000105146|Q9UQB9-2|AURKC;;nc|ENSG00000178999|Q96GD4-2|AURKB;;nc|ENSG00000105146|Q9UQB9-3|AURKC;;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;;ENSG00000087586|ENST00000395915|AURKA 5.695429801940918 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18457 88.341 21.0 1773100.0 25 0 263150.0 + 31910 RTVKWSLRWLL 11 64 486.6275399362145 1456.8607904088435 3 486.6275817751884 MULTI CID FTMS 0 0 0 18450 1433696.125 0.6101982266451818 2 -0.21063232421875 7 Unmodified _RTVKWSLRWLL_ REV__ENST00000415368.5_1_2:262747-263276:-|nuORF;REV__ENST00000465733.5_1_2:260594-263276:-|nuORF 1.4819007175156935 0.86815623132643 3 NV 2 -1 13.385 0.0 0.0 0.91876 0.0 0.0 1225.7387181205606 0.0 1225.7387181205606 0.0 0.7090260437293221 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 NV 0.91876 - 65 + 1 1.162 40240.9 1.0 12692 5763 18450 HBL1_DMSO_200M_050219_1,18457 HBL1_DMSO_200M_050219_1,18457,RTVKWSLRWLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18458 88.343 35.0 1373200.0 25 0 171030.0 + 3939 DALLEQAMI 9 81 502.25985733414495 1002.50516173509 2 502.2604858279228 MULTI CID FTMS 0 0 0 18450 745973.8125 0.6442426617396781 -2 0.2052230834960937 8 Unmodified _DALLEQAMI_ ENSG00000008838|ENST00000394128|MED24;ENST00000581054.1_1_17:38192365-38210656:-|nuORF;nc|ENSG00000008838|O75448-2|MED24 24.020572477871973 0.2255576514309169 3 {[DA]|[EG]}{I|L}A{I|L}{[DA]|[EG]}AM{I|L} 10 2 + 30.952 0.0 0.0 3.0874 3.0874 69.889 0.0 0.0 0.0 6.989700043360188 6.215234340851481 6.215234340851481 1.76091259055681 0 0.6549471895720985 1.154901959985743 0.0 0.0 {[DA]|[EG]}{I|L}A{I|L}{[DA]|[EG]}AM{I|L};{[DA]|[EG]}{I|L}A{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}M{I|L};{[DA]|[EG]}{I|L}{[QN]|[E{I|L}]|[KN]}QAM{I|L};{[DA]|[EG]}A{I|L}{I|L}{[DA]|[EG]}AM{I|L};{[DA]|[EG]}A{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}M{I|L};{[QN]|[E{I|L}]|[KN]}GA{I|L}{[DA]|[EG]}AM{I|L};{[QN]|[E{I|L}]|[KN]}GA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}M{I|L};{[QN]|[E{I|L}]|[KN]}Q{I|L}{[DA]|[EG]}AM{I|L};{[QN]|[E{I|L}]|[KN]}G{[QN]|[E{I|L}]|[KN]}QAM{I|L};{[QN]|[E{I|L}]|[KN]}Q{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}M{I|L} 3.0874;2.9118;2.7361;2.6905;2.5149;2.3902;2.2146;2.0389;2.0389;1.8687 -;-;+;-;-;-;-;-;-;- + 256 1 1.162 43003.8 1.0 12693 5763 18450 HBL1_DMSO_200M_050219_1,18458 HBL1_DMSO_200M_050219_1,18458,DALLEQAMI False True DALLEQAMI 88.342531 502.260485827923 10415431.0 18450.0 nc|ENSG00000008838|O75448-2|MED24;;ENSG00000008838|ENST00000394128|MED24;;ENST00000581054.1_1_17:38192365-38210656:-|nuORF 3.490278879801432 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18459 88.344 44.0 362130.0 25 0 30820.0 + 29577 QLRKQFQW 8 43 567.3143754100957 1132.6141978869914 2 567.3138305544853 MULTI CID FTMS 0 0 0 18450 691050.9375 1.0 0 0.0 9 Unmodified _QLRKQFQW_ REV__ENSG00000130396|ENST00000683244|AFDN;REV__nc|ENSG00000130396|P55196-1|AFDN;REV__nc|ENSG00000130396|P55196-2|AFDN;REV__nc|ENSG00000130396|P55196-3|AFDN;REV__nc|ENSG00000130396|P55196-5|AFDN;REV__nc|ENSG00000130396|P55196-6|AFDN;REV__nc|ENSG00000130396|P55196|AFDN 2.302733041254933 0.8103549651115762 3 {I|L} 1 -1 10.969 0.0 0.0 0.96848 0.0 0.0 1001.5194540899196 0.0 1001.5194540899196 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.96848 + + 4 + 1 1.162 23174.5 1.0 12694 5763 18450 HBL1_DMSO_200M_050219_1,18459 HBL1_DMSO_200M_050219_1,18459,QLRKQFQW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18460 88.352 437.0 208540.0 25 0 66227.0 20828 LLYKRRYIFSV 11 97 729.4376166995928 1456.8606804659855 2 729.4373046755791 MULTI CID FTMS 0 0 0 18450 456910.0 0.6827458588705241 2 -0.21063232421875 10 Unmodified _LLYKRRYIFSV_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 0.4545168274142398 0.8730034954726786 3 YY{M(Oxidation (M))|F} 3 8 16.4 0.0 0.0 1.1257 0.0 0.0 0.0 980.636168097098 980.636168097098 4.146329101632009 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 YY{M(Oxidation (M))|F} 1.1257 - 78 1 1.162 80550.9 1.0 12695 5763 18450 HBL1_DMSO_200M_050219_1,18460 HBL1_DMSO_200M_050219_1,18460,LLYKRRYIFSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18461 88.354 119.0 803990.0 25 0 89674.0 + 2340 AQLELISRL 9 131 521.8165366196679 1041.6185203061357 2 521.8154174685478 MULTI CID FTMS 0 0 0 18450 316370.21875 0.0874829576751676 -4 0.4836349487304687 11 Unmodified _AQLELISRL_ ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12 40.23920728925047 0.0741434193262949 3 [QA]{I|L}E{I|L}{I|L}RS{I|L} 9 2 + 59.781 0.0 0.0 5.7393 5.7393 82.512 0.0 0.0 0.0 4.823777596427931 9.51544993495972 4.823777596427931 4.823777596427931 0 1.2302046884880935 0.4436974992327127 0.8639829889124311 0.0 [QA]{I|L}E{I|L}{I|L}RS{I|L};{[VA]|[{I|L}G]}[W{I|L}]{I|L}{I|L}TN{I|L};[QA]{I|L}E{I|L}{I|L}RTV;[QA]{I|L}E{I|L}TRV{I|L};{[VA]|[{I|L}G]}[W{I|L}]{I|L}{I|L}TGG{I|L};[QA]{I|L}E{I|L}TR{I|L}V;{[QN]|[E{I|L}]|[KN]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TN{I|L};[{I|L}V]WA{I|L}{I|L}TN{I|L};[{I|L}A]{[RE]|[WV]}{I|L}{I|L}TN{I|L};{[VA]|[{I|L}G]}[W{I|L}]{I|L}{I|L}GAS{I|L} 5.7393;5.2762;4.8257;4.7365;4.3921;3.823;3.5433;3.5346;3.4702;3.2635 -;-;-;-;-;-;-;-;-;- 1079 + 1 1.162 81018.5 1.0 12696 5763 18450 HBL1_DMSO_200M_050219_1,18461 HBL1_DMSO_200M_050219_1,18461,AQLELISRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18462 88.358 186.0 716270.0 25 0 51674.0 -1 0 119 973.9729449418528 1945.9313369505053 2 973.9772827029228 MULTI CID FTMS 0 0 0 18450 291545.875 0.2660157453804145 3 -0.3309478759765625 12 3 [MN][NP]{I|L}NEA[HT]ED{I|L}{I|L}T 15 -1 67.027 0.0 0.0 3.4445 0.0 0.0 0.0 250.1193483942016 250.1193483942016 30.999934467764863 0.0 0.0 0.0 0 0.2614393726401688 1.5228787452803376 1.8539171939081167 0.0 [MN][NP]{I|L}NEA[HT]ED{I|L}{I|L}T 3.4445 - 27099 + 1 1.162 89831.6 1.0 12697 5763 18450 HBL1_DMSO_200M_050219_1,18462 HBL1_DMSO_200M_050219_1,18462, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18463 88.361 167.0 436070.0 25 0 65521.0 30928 RKFGRFLKMI 10 90 432.59754038684 1294.7707917607202 3 432.5979492068291 MULTI CID FTMS 0 0 0 18450 241079.4375 0.1855290308244182 4 -0.4086227416992187 13 Unmodified _RKFGRFLKMI_ ENST00000395603.7_1_X:76907692-76907743:-|nuORF 3.2813086475875832 0.7114585191678878 3 M{I|L}{I|L} 3 8 16.198 0.0 0.0 1.251 0.0 0.0 547.331962270289 387.20408044986567 934.5360427201548 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L}{I|L} 1.251 - 47 + 1 1.162 72682.7 1.0 12698 5763 18450 HBL1_DMSO_200M_050219_1,18463 HBL1_DMSO_200M_050219_1,18463,RKFGRFLKMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18464 88.372 608.0 102180.0 25 0 13566.0 -1 0 76 1074.030200183392 0 1074.030200183392 PEAK CID FTMS 0 0 0 -1 0 14 3 YPW 3 -1 8.4164 0.0 0.0 0.39218 0.0 0.0 1073.5316243569373 623.2863863580686 1696.818010715006 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YPW 0.39218 - 134 + 1 1.162 48192.3 1.0 12699 5763 18450 HBL1_DMSO_200M_050219_1,18464 HBL1_DMSO_200M_050219_1,18464, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18465 88.385 800.0 319340.0 25 0 34887.0 + 24794 MPILISKI 8 171 457.7908157744597 913.5670786157194 2 457.7905151247978 MULTI CID FTMS 0 0 0 18450 177427.03125 0.9609988003732172 -2 0.2052230834960937 15 Unmodified _MPILISKI_ ENSG00000101400|ENST00000217381|SNTA1;ENSG00000168807|ENST00000336278|SNTB2;ENSG00000172164|ENST00000517992|SNTB1;ENST00000519177.5_1_8:121583594-121823792:-|nuORF;nc|ENSG00000101400|Q13424-2|SNTA1;nc|ENSG00000168807|Q13425-2|SNTB2;nc|ENSG00000172164|Q13884-2|SNTB1 68.08070601005525 0.1147890174299629 3 MP{I|L}{I|L}{I|L}SK{I|L} 8 0 + 81.227 0.0 0.0 8.8912 8.8912 89.607 0.0 0.0 0.0 26.77871164438791 10.086001717619183 10.086001717619183 4.762258009107228 0 1.2288559305164175 1.3979400086720375 0.6307196863200843 0.1307196863200844 + + MP{I|L}{I|L}{I|L}SK{I|L};M{I|L}P{I|L}{I|L}SK{I|L};MP{I|L}{I|L}{I|L}S{I|L}K;MP{I|L}{I|L}{I|L}[KT]V;M{I|L}P{I|L}{I|L}S{I|L}K;M{I|L}P{I|L}{I|L}[KT]V;MP{I|L}{I|L}{I|L}[K{I|L}]S;MP{I|L}{I|L}[KT]V{I|L};MP{I|L}{I|L}[KT]{I|L}V;M{I|L}P{I|L}{I|L}[K{I|L}]S 8.8912;8.3699;7.7871;7.4607;7.2658;6.9394;6.6486;6.3313;6.2446;6.1273 +;-;-;-;-;-;-;-;-;- + 1801 + 1 1.162 196758.2 0.9100000262260436 12700 5763 18450 HBL1_DMSO_200M_050219_1,18465 HBL1_DMSO_200M_050219_1,18465,MPILISKI True True MPILISKI 88.385425 457.790515124798 2614154.0 18450.0 ENSG00000172164|ENST00000517992|SNTB1;;ENST00000519177.5_1_8:121583594-121823792:-|nuORF;;nc|ENSG00000101400|Q13424-2|SNTA1;;nc|ENSG00000168807|Q13425-2|SNTB2;;ENSG00000101400|ENST00000217381|SNTA1;;nc|ENSG00000172164|Q13884-2|SNTB1;;ENSG00000168807|ENST00000336278|SNTB2 1.5410053332646687 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18466 88.399 800.0 574290.0 25 0 45392.0 + 21078 LPAGILPMV 9 224 463.7723322433504 925.5301115535008 2 463.7713806033134 MULTI CID FTMS 0 0 0 18450 157732.828125 0.419804599939135 -2 0.2052230834960937 16 Oxidation (M) _LPAGILPM(Oxidation (M))V_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 79.93452657146344 0.0175326119056068 3 [{I|L}A]PG{I|L}{I|L}P{M(Oxidation (M))|F}V 9 2 + 62.085 0.0 0.0 6.7081 6.7081 79.918 0.0 0.0 0.0 3.2559818715471778 10.044321917401078 3.2559818715471778 1.193701139312246 0 1.370371515030528 2.0 0.0 0.0 [{I|L}A]PG{I|L}{I|L}P{M(Oxidation (M))|F}V;[{I|L}A]GP{I|L}{I|L}P{M(Oxidation (M))|F}V;[{I|L}P]Q{I|L}{I|L}P{M(Oxidation (M))|F}V;[{I|L}P]AG{I|L}{I|L}P{M(Oxidation (M))|F}V;[{I|L}A]PG{I|L}P{I|L}{M(Oxidation (M))|F}V;[{I|L}A]GP{I|L}P{I|L}{M(Oxidation (M))|F}V;[{I|L}P]Q{I|L}P{I|L}{M(Oxidation (M))|F}V;[{I|L}P]AG{I|L}P{I|L}{M(Oxidation (M))|F}V;[PA]{I|L}G{I|L}{I|L}P{M(Oxidation (M))|F}V;[PA]G{I|L}{I|L}{I|L}P{M(Oxidation (M))|F}V 6.7081;6.5791;6.3563;6.1431;5.4127;5.2837;5.0609;4.8477;4.8421;4.8421 -;-;-;+;-;-;-;-;-;- + 1834 1 1.162 345471.6 0.9100000262260436 12701 5763 18450 HBL1_DMSO_200M_050219_1,18466 HBL1_DMSO_200M_050219_1,18466,LPAGILPMV True False LPAGILPMV 88.399239 463.771380603313 5175964.5 18450.0 nc|ENSG00000124214|O95793-2|STAU1;;nc|ENSG00000124214|O95793-3|STAU1;;ENSG00000124214|ENST00000371856|STAU1 5.223138173421224 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18467 88.411 669.0 77689.0 25 0 9867.3 + 15212 IPFHISRLLSL 11 106 648.3932180704345 1294.771883207669 2 648.8964721560478 MULTI CID FTMS 0 0 0 18450 145894.328125 0.4329270774941591 4 -0.4086227416992187 17 Unmodified _IPFHISRLLSL_ REV__ENSG00000249437|ENST00000517649|NAIP;REV__ENST00000315147.8_1_5:70265933-70281744:-|nuORF;REV__ENST00000511830.2_1_5:69390488-69422514:-|nuORF;REV__nc|ENSG00000249437|Q13075-2|NAIP 6.2057823575117 0.8458686499021061 3 {I|L} 1 -1 12.474 0.0 0.0 0.96343 0.0 0.0 1163.6770783754407 0.0 1163.6770783754407 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.96343 + + 45 + 1 1.162 51206.4 1.0 12702 5763 18450 HBL1_DMSO_200M_050219_1,18467 HBL1_DMSO_200M_050219_1,18467,IPFHISRLLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18468 88.424 654.0 116780.0 25 0 4089.2 -1 0 86 1076.529969121931 3226.568077965993 3 1076.867114245892 MULTI CID FTMS 0 0 0 18450 108026.28125 0.58439419903333 -2 0.2052230834960937 18 3 VM{[QV]|[N{I|L}]|[RA]|[KV]} 4 -1 16.198 0.0 0.0 0.50202 0.0 0.0 2751.318534630813 0.0 2751.318534630813 0.0 1.9280313679915635 0.0 0.0 0 0.0 0.0 0.0 0.0 VM{[QV]|[N{I|L}]|[RA]|[KV]} 0.50202 - 199 1 1.162 57641.6 1.0 12703 5763 18450 HBL1_DMSO_200M_050219_1,18468 HBL1_DMSO_200M_050219_1,18468, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18469 88.438 800.0 215230.0 25 0 31049.0 + 11833 GLPMQSIVL 9 191 479.27393325796805 956.533313582736 2 479.2739440798759 MULTI CID FTMS 0 0 0 18450 112373.34375 0.0322647901609243 16 -1.5714035034179688 19 Unmodified _GLPMQSIVL_ REV__ENST00000334529.9_1_3:112218294-112218402:-|nuORF 30.22481116460888 0.1466181017706357 3 {[VA]|[{I|L}G]}C(Carbamidomethyl (C))VP{I|L}S[{I|L}V] 9 -1 + 27.238 0.0 0.0 2.8475 2.8475 76.507 0.0 0.0 0.0 1.0912122129838089 -0.0273992222153793 -0.0273992222153793 7.269987279362621 0 0.25 1.2218487496163564 0.0 0.0 {[VA]|[{I|L}G]}C(Carbamidomethyl (C))VP{I|L}S[{I|L}V];{[VA]|[{I|L}G]}GCVP{I|L}S[{I|L}V];[{I|L}V]{[C(Carbamidomethyl (C))G]|[NC]}P{I|L}S[{I|L}V];[{I|L}A][MN]P{I|L}S[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}CVP{I|L}S[{I|L}V];[VG]ACVP{I|L}S[{I|L}V];[VG]C(Carbamidomethyl (C)){I|L}P{I|L}S[{I|L}V];[VS]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}S[{I|L}V];[PA]N{M(Oxidation (M))|F}P{I|L}S[{I|L}V];{[TV]|[{I|L}S]}Q[NG]V{I|L}N{I|L} 2.8475;2.0875;1.9175;1.9175;1.9149;1.8123;1.7588;1.4874;1.2653;1.2401 -;-;-;-;-;-;-;-;-;- 1084 1 1.162 135061.5 0.8399999737739563 12704 5763 18450 HBL1_DMSO_200M_050219_1,18469 HBL1_DMSO_200M_050219_1,18469,GLPMQSIVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18470 88.45 717.0 247330.0 25 0 20215.0 + 128 AALEEADKMFL 11 175 619.3099869338249 1236.6054209344495 2 619.2980224490166 MULTI CID FTMS 0 0 0 -1 0 20 Unmodified _AALEEADKMFL_ ENSG00000255302|ENST00000530028|EID1;nc|ENSG00000255302|Q9Y6B2-2|EID1 89.60864043982822 0.000670653681945 3 {[QN]|[E{I|L}]|[KN]}AACSE{I|L}AA{M(Oxidation (M))|F}{I|L} 12 8 + 86.175 0.0 0.0 6.9687 6.9687 88.394 0.0 0.0 0.0 7.003922491910117 8.896088894644805 7.003922491910117 7.003922491910117 0 0.8494850021680094 1.6989700043360187 1.2131582230515534 0.0 {[QN]|[E{I|L}]|[KN]}AACSE{I|L}AA{M(Oxidation (M))|F}{I|L};AA{I|L}ECSE{I|L}AA{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}AACS{M(Oxidation (M))|F}[PG]{I|L}MV;[{I|L}A]AECSE{I|L}AA{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}AACPDKM{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}AACSV{[DS]|[MA]|[CV]|TT}{I|L}MV;{[QN]|[E{I|L}]|[KN]}AAEADKM{M(Oxidation (M))|F}{I|L};AATAEME{I|L}AA{M(Oxidation (M))|F}{I|L};[{I|L}T]C(Carbamidomethyl (C))AEE{I|L}AA{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[NS]ME{I|L}AA{M(Oxidation (M))|F}{I|L} 6.9687;6.4023;6.2493;5.8859;5.8146;5.7268;5.7181;5.6749;5.6407;5.5922 -;-;-;-;-;-;-;-;-;- 59733 1 1.162 131680.3 1.0 12705 5763 18450 HBL1_DMSO_200M_050219_1,18470 HBL1_DMSO_200M_050219_1,18470,AALEEADKMFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18472 88.454 5.2 8834100.0 25 0 1464200.0 + 11486 GIIPRVIQL 9 67 504.83188664626135 1007.6492203593228 2 504.8322326540947 MULTI CID FTMS 0 0 0 18471 6864465.0 0.1276197078777521 2 -0.2108993530273437 1 Unmodified _GIIPRVIQL_ ENSG00000226650|ENST00000435029|KIF4B 50.855029805455786 0.0384952370514206 3 {[VA]|[{I|L}G]}{I|L} 3 6 33.952 0.0 0.0 3.3695 0.0 0.0 0.0 721.4374338205133 721.4374338205133 9.488474775526186 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 + {[VA]|[{I|L}G]}{I|L} 3.3695 + + 35 1 1.169 41358.4 1.0 12706 5764 18471 HBL1_DMSO_200M_050219_1,18472 HBL1_DMSO_200M_050219_1,18472,GIIPRVIQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18473 88.456 14.0 2854800.0 25 0 162610.0 + 44845 YPPAPFMHI 9 86 536.767818970596 1071.5210850079918 2 536.7678710818291 MULTI CID FTMS 0 0 0 18471 1822618.0 0.2882339982765592 3 -0.28857421875 2 Unmodified _YPPAPFMHI_ ENSG00000143569|ENST00000428931|UBAP2L;ENST00000484819.1_1_1:154238957-154241481:+|nuORF;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 36.46614268402704 0.0948557732959553 3 YPPA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M[H{I|L}] 9 0 + 59.601 0.0 0.0 5.5623 5.5623 90.36 0.0 0.0 0.0 50.14690562778355 5.642492736872597 5.642492736872597 44.24268947394387 0 0.3494850021680094 2.0 0.3252574989159953 0.0 + + YPPA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M[H{I|L}];[PA][KC]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AP{[QN]|[E{I|L}]|[KN]} 5.5623;1.4333 +;- + 117 + 1 1.169 39455.8 1.0 12707 5764 18471 HBL1_DMSO_200M_050219_1,18473 HBL1_DMSO_200M_050219_1,18473,YPPAPFMHI True True YPPAPFMHI 88.455512 536.767871081829 236647728.0 18471.0 nc|ENSG00000143569|Q14157-5|UBAP2L;;ENSG00000143569|ENST00000428931|UBAP2L;;ENST00000484819.1_1_1:154238957-154241481:+|nuORF;;nc|ENSG00000143569|Q14157-3|UBAP2L 7.842876116434733 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18474 88.457 43.0 708710.0 25 0 61754.0 + 30055 QVADILFQTA 10 66 553.2978643459693 1104.5811757587385 2 553.2985717654228 MULTI CID FTMS 0 0 0 18471 861426.1875 0.7152825234406917 -1 0.1200485229492187 3 Unmodified _QVADILFQTA_ ENSG00000114491|ENST00000232607|UMPS 12.240655878213236 0.6421556946785427 3 A 1 9 10.837 0.0 0.0 0.98114 0.0 0.0 1015.5328263098112 0.0 1015.5328263098112 0.0 0.1241179186251617 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.98114 + + 28 + 1 1.169 30309.9 1.0 12708 5764 18471 HBL1_DMSO_200M_050219_1,18474 HBL1_DMSO_200M_050219_1,18474,QVADILFQTA False True QVADILFQTA 88.456726 553.298571765423 14011273.0 18471.0 ENSG00000114491|ENST00000232607|UMPS 5.274871190388997 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18475 88.458 12.0 1199700.0 25 0 113210.0 + 18694 LAIWEASL 8 38 451.75254133747273 901.4905297417456 2 451.7528564333916 MULTI CID FTMS 0 0 0 18471 848913.75 0.0363845055177629 33 -3.4459381103515625 4 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 10.183394434864962 0.7604730176254005 3 {I|L} 1 7 13.099 0.0 0.0 1.453 0.0 0.0 770.3956638743612 0.0 770.3956638743612 0.0 6.109243748081781 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.453 + + 7 + 1 1.169 19296.0 1.0 12709 5764 18471 HBL1_DMSO_200M_050219_1,18475 HBL1_DMSO_200M_050219_1,18475,LAIWEASL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18476 88.459 33.0 961990.0 25 0 142350.0 42212 VSGGELFDRI 10 47 546.7872492726259 1091.5599456120517 2 546.7877685427666 MULTI CID FTMS 0 0 0 18471 779063.375 0.5919075384955527 1 -0.0905838012695312 5 Unmodified _VSGGELFDRI_ ENSG00000008118|ENST00000361322|CAMK1G;ENSG00000134072|ENST00000256460|CAMK1;ENSG00000183049|ENST00000619168|CAMK1D;ENST00000397277.6_1_3:9799496-9807558:-|nuORF;nc|ENSG00000008118|Q96NX5-2|CAMK1G;nc|ENSG00000183049|Q8IU85-2|CAMK1D 12.240655878213236 0.6421556946785427 3 [VS]ND{I|L}{M(Oxidation (M))|F}ER{I|L} 9 4 + 70.556 0.0 0.0 6.4638 6.4638 89.205 0.0 0.0 0.0 58.773651015009406 11.082268588648247 11.082268588648247 9.208187539523747 0 0.8494850021680094 2.0 0.0 0.0 [VS]ND{I|L}{M(Oxidation (M))|F}ER{I|L};[VS]GGD{I|L}{M(Oxidation (M))|F}ER{I|L};[VS]ND{I|L}{M(Oxidation (M))|F}[W{I|L}]V;[VS]GGD{I|L}{M(Oxidation (M))|F}[W{I|L}]V;[VS]{[SA]|[TG]}[PS]{M(Oxidation (M))|F}ER{I|L} 6.4638;5.6202;5.0564;4.2128;3.5133 -;-;-;-;- 63 + 1 1.169 32321.1 1.0 12710 5764 18471 HBL1_DMSO_200M_050219_1,18476 HBL1_DMSO_200M_050219_1,18476,VSGGELFDRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18477 88.462 129.0 554760.0 25 0 25934.0 -1 0 89 966.9643222406994 1931.9140915481987 2 967.4651367068292 MULTI CID FTMS 0 0 0 18471 720303.5625 0.2458750927936647 4 -0.3633499145507812 6 3 [NP]{I|L}NW[PG]RQDAD{I|L}NP[EP] 17 -1 + 80.107 0.0 0.0 4.1465 4.1465 79.032 0.0 0.0 0.0 9.1491609813381 58.935626866789065 9.1491609813381 6.726410656136693 0 0.3807196863200844 0.744727494896694 0.3807196863200844 0.3807196863200844 [NP]{I|L}NW[PG]RQDAD{I|L}NP[EP];[NP]{I|L}NW[PG]RQWD{I|L}NP[EP];[NP]{I|L}NW[PG]RQDW{I|L}NP[EP];[NP]{I|L}NAD[PG]RQWD{I|L}NP[EP];[NP]{I|L}NAD[PG]RQDW{I|L}NP[EP];[NP]{I|L}NW[PG][VG]QDAD{I|L}NP[EP];[NP]{I|L}NW[PG]R[AG]DAD{I|L}NP[EP];[NP]{I|L}NW[PG]RQDAD{I|L}GGP[EP];[NP]{I|L}GGW[PG]RQDAD{I|L}NP[EP];[MN][{I|L}P]{I|L}DADQR[PG]DYQ{[TV]|[{I|L}S]} 4.1465;3.7983;3.7983;3.7847;3.7847;3.6807;3.6807;3.6807;3.6807;3.6631 -;-;-;-;-;-;-;-;-;- 3965 1 1.169 53638.5 1.0 12711 5764 18471 HBL1_DMSO_200M_050219_1,18477 HBL1_DMSO_200M_050219_1,18477, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18478 88.463 72.0 346330.0 25 0 35395.0 + -1 VGYDKDFLTI 10 46 585.80501125263 1169.59546957206 2 585.8052856326103 MULTI CID FTMS 0 0 0 18471 645648.625 0.490705065601019 -1 0.1200485229492187 7 Oxidation (M) _GVSSLVFTM(Oxidation (M))TL_ ENSG00000123066|ENST00000281928|MED13L 24.020572477871973 0.5281922720044371 3 T{I|L} 2 -1 27.206 0.0 0.0 2.3261 0.0 0.0 937.452813177332 0.0 937.452813177332 0.0 9.08993463487128 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 T{I|L} 2.3261 + + 29 + 1 1.169 26732.9 1.0 12712 5764 18471 HBL1_DMSO_200M_050219_1,18478 HBL1_DMSO_200M_050219_1,18478,GVSSLVFTMTL False False VGYDKDFLTI 88.46346 585.80528563261 24909082.0 18471.0 ENSG00000123066|ENST00000281928|MED13L 2.8061155875523887 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18479 88.467 177.0 715780.0 25 0 319450.0 26859 PCEDGGGG 8 70 346.1223262006547 690.2300994681094 2 346.1224243044853 MULTI CID FTMS 0 0 0 18471 610141.375 0.5261548308901188 -2 0.2828445434570312 8 Unmodified _PCEDGGGG_ ENSG00000229544|ENST00000451024|NKX1-2 0.0 0.8243325171867699 3 V 1 8 6.9897 0.0 0.0 1.0127 0.0 0.0 59.047196597108446 529.0913301674484 588.1385267645569 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0127 - 2 + 1 1.169 103584.8 1.0 12713 5764 18471 HBL1_DMSO_200M_050219_1,18479 HBL1_DMSO_200M_050219_1,18479,PCEDGGGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18480 88.468 38.0 840360.0 25 0 91898.0 + 5581 DMYLVPKL 8 53 489.7699285117599 977.5253040903198 2 489.7704040408134 MULTI CID FTMS 0 0 0 18471 598708.0625 0.1688478174133001 2 -0.2108993530273437 9 Unmodified _DMYLVPKL_ ENSG00000186141|ENST00000334163|POLR3C 28.486842064014134 0.4448922141344407 3 [MD]Y{I|L}VPK{I|L} 8 0 + 44.914 0.0 0.0 4.5947 4.5947 80.925 0.0 0.0 0.0 13.23268251561565 7.289332277134619 7.289332277134619 7.289332277134619 0 0.6989700043360187 2.0 0.0 0.0 + + [MD]Y{I|L}VPK{I|L};[MD]Y{I|L}V{I|L}[KP] 4.5947;3.849 +;- + 29 + 1 1.169 31817.5 1.0 12714 5764 18471 HBL1_DMSO_200M_050219_1,18480 HBL1_DMSO_200M_050219_1,18480,DMYLVPKL False True DMYLVPKL 88.468066 489.770404040813 96331392.0 18471.0 ENSG00000186141|ENST00000334163|POLR3C 7.725100199381511 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18481 88.47 100.0 531120.0 25 0 84342.0 + 16269 IVTWFLVL 8 84 495.802801249765 989.59104956633 2 495.8030883669853 MULTI CID FTMS 0 0 0 18471 448043.3125 0.4809486788540841 -3 0.3252716064453125 10 Unmodified _IVTWFLVL_ ENSG00000163812|ENST00000424952|ZDHHC3;nc|ENSG00000163812|Q9NYG2-2|ZDHHC3 20.453626601364224 0.6087503291685402 3 [H{I|L}]EAP{I|L}VV{I|L} 9 5 + 57.33 0.0 0.0 5.7933 5.7933 77.125 0.0 0.0 0.0 3.4678748622465605 16.463461971335605 3.4678748622465605 1.249387366082999 0 0.9247425010840048 0.0 0.0 0.0 [H{I|L}]EAP{I|L}VV{I|L};[H{I|L}]PEA{I|L}VV{I|L};[H{I|L}]EAPV{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EA{I|L}VV{I|L};[H{I|L}]PEAV{I|L}V{I|L};[H{I|L}]EPA{I|L}VV{I|L};[H{I|L}]EAVP{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EAV{I|L}V{I|L};[H{I|L}]EPAV{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}W{I|L}V{I|L} 5.7933;5.667;5.4891;5.4428;5.3628;5.1849;5.1849;5.1386;4.8807;4.484 -;-;-;-;-;-;-;-;-;- 545 1 1.169 46441.4 1.0 12715 5764 18471 HBL1_DMSO_200M_050219_1,18481 HBL1_DMSO_200M_050219_1,18481,IVTWFLVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18482 88.472 75.0 423990.0 25 0 47914.0 + 4885 DGHFVPNITF 10 46 573.7826501391392 1145.5507473450782 2 573.7827636599541 MULTI CID FTMS 0 0 0 18471 439195.15625 0.3017604130219437 -3 0.3252716064453125 11 Unmodified _DGHFVPNITF_ ENSG00000197713|ENST00000359429|RPE;ENSG00000235376|ENST00000441178|RPEL1;nc|ENSG00000197713|Q96AT9-4|RPE 15.248480904072842 0.5916873121453583 3 {M(Oxidation (M))|F}V[NP]{I|L}T{M(Oxidation (M))|F} 7 3 25.233 0.0 0.0 2.2027 0.0 0.0 309.1073170392594 0.0 309.1073170392594 0.0 10.629325833262726 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + {M(Oxidation (M))|F}V[NP]{I|L}T{M(Oxidation (M))|F} 2.2027 + + 52 1 1.169 31135.6 1.0 12716 5764 18471 HBL1_DMSO_200M_050219_1,18482 HBL1_DMSO_200M_050219_1,18482,DGHFVPNITF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18483 88.48 474.0 247600.0 25 0 52938.0 -1 0 77 1156.5001186804016 3466.4785266414046 3 1156.836962878704 MULTI CID FTMS 0 0 0 18471 278923.15625 1.0 0 0.0 12 3 {I|L}VT 3 -1 17.435 0.0 0.0 0.50296 0.0 0.0 2327.90841052988 822.3476656549436 3150.2560761848235 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 {I|L}VT 0.50296 - 126 + 1 1.169 94244.6 1.0 12717 5764 18471 HBL1_DMSO_200M_050219_1,18483 HBL1_DMSO_200M_050219_1,18483, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18484 88.49 552.0 481800.0 25 0 58354.0 + + 20556 LPRLESLDI 9 211 527.3082810701694 1052.6020092071387 2 528.3093749880791 MULTI CID FTMS 0 0 0 18471 280859.03125 0.2305667935181085 7 -0.6379013061523438 13 Unmodified _LLMGSGHLIL_ ENSG00000162378|ENST00000294353|ZYG11B;ENSG00000203995|ENST00000371528|ZYG11A 36.04419817259434 0.1993394420055842 3 {I|L}{I|L}G{I|L}[DP]S{I|L}D 9 -1 46.132 0.0 0.0 4.3826 0.0 0.0 0.0 126.0711867478084 126.0711867478084 11.664981970643652 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.4247425010840047 0.0 {I|L}{I|L}G{I|L}[DP]S{I|L}D 4.3826 - 3032 1 1.169 206454.6 1.0 12718 5764 18471 HBL1_DMSO_200M_050219_1,18484 HBL1_DMSO_200M_050219_1,18484,LLMGSGHLIL False False LPRLESLDI 88.490097 528.309374988079 2719381.25 18471.0 ENSG00000162378|ENST00000294353|ZYG11B;;ENSG00000203995|ENST00000371528|ZYG11A 2.293293078740438 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18485 88.492 97.0 438900.0 25 0 58523.0 + + 35595 STVEVIFHV 9 79 515.7785877113145 1029.5426224894288 2 515.7820312380791 MULTI CID FTMS 0 0 0 18471 275752.90625 0.5868851181163687 -4 0.418975830078125 14 Unmodified _STVEPQTRL_ ENSG00000188559|ENST00000202677|RALGAPA2;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;ENSG00000174373|ENST00000680220|RALGAPA1;nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2 14.838274106304384 0.4350285940865338 3 {[WT]|[RM]}EV{I|L}{M(Oxidation (M))|F}HV 8 -1 + 31.833 0.0 0.0 3.0919 3.0919 77.016 0.0 0.0 0.0 -0.5090746888058177 10.133418048066789 -0.5090746888058177 7.303272152714939 0 0.0 0.0 0.5 0.0 {[WT]|[RM]}EV{I|L}{M(Oxidation (M))|F}HV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}VWT;{[QN]|[E{I|L}]|[KN]}V{[{M(Oxidation (M))|F}H]|[RQ]}VWT 3.0919;2.3826;0.73234 -;-;- 103 + 1 1.169 39299.2 1.0 12719 5764 18471 HBL1_DMSO_200M_050219_1,18485 HBL1_DMSO_200M_050219_1,18485,STVEPQTRL False False STVEVIFHV 88.492222 515.782031238079 3203183.75 18471.0 ENSG00000188559|ENST00000202677|RALGAPA2;;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;;nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;;nc|ENSG00000174373|Q6GYQ0|RALGAPA1;;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;;ENSG00000174373|ENST00000680220|RALGAPA1;;nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2;;nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2 6.420559883117676 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18486 88.495 121.0 246440.0 25 0 27312.0 + 45840 YYPQQAIVF 9 54 564.7896305996712 1127.5647082661424 2 564.7906371951103 MULTI CID FTMS 0 0 0 18471 248504.4375 0.3448409813638287 3 -0.28857421875 15 Unmodified _YYPQQAIVF_ ENSG00000184831|ENST00000379226|APOO;nc|ENSG00000184831|Q9BUR5-2|APOO 8.593279151180031 0.6146971463335029 3 {I|L}AS{M(Oxidation (M))|F} 4 7 18.047 0.0 0.0 1.6006 0.0 0.0 590.2729124671174 116.0510271661742 706.3239396332916 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AS{M(Oxidation (M))|F} 1.6006 - 48 + 1 1.169 30023.0 1.0 12720 5764 18471 HBL1_DMSO_200M_050219_1,18486 HBL1_DMSO_200M_050219_1,18486,YYPQQAIVF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18487 88.504 505.0 113270.0 25 0 23487.0 -1 0 46 1173.1676245175986 3516.481044152996 3 1174.173876941204 MULTI CID FTMS 0 0 0 18471 248756.046875 0.0182887637651307 9 -0.877716064453125 16 3 E 1 -1 5.4846 0.0 0.0 0.15597 0.0 0.0 2860.2545094995 524.1632784479124 3384.417787947412 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15597 - 1 + 1 1.169 51648.0 1.0 12721 5764 18471 HBL1_DMSO_200M_050219_1,18487 HBL1_DMSO_200M_050219_1,18487, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18488 88.507 108.0 744220.0 25 0 176020.0 + 33431 SIAGIFKEV 9 84 482.2788856750527 962.5432184169052 2 482.2791320681572 MULTI CID FTMS 0 0 0 18471 203522.25 0.2261063452974674 -2 0.2828445434570312 17 Unmodified _SIAGIFKEV_ ENSG00000080189|ENST00000372230|SLC35C2;ENST00000480329.5_1_20:44979343-44983832:-|nuORF;ENST00000493599.1_1_20:44979343-44980935:-|nuORF;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2 43.77239144664712 0.0547478964384323 3 {[TV]|[{I|L}S]}AG{I|L}{M(Oxidation (M))|F}KEV 9 0 + 53.193 0.0 0.0 5.5263 5.5263 79.183 0.0 0.0 0.0 10.159360206500487 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 1.1237125054200234 2.0 0.3252574989159953 0.0 + + {[TV]|[{I|L}S]}AG{I|L}{M(Oxidation (M))|F}KEV;{[TV]|[{I|L}S]}AG{I|L}{M(Oxidation (M))|F}KD{I|L};{[TV]|[{I|L}S]}Q{I|L}{M(Oxidation (M))|F}KEV;{[TV]|[{I|L}S]}Q{I|L}{M(Oxidation (M))|F}KD{I|L};{[TV]|[{I|L}S]}AG{I|L}[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}AG{I|L}{M(Oxidation (M))|F}VV{[SA]|[TG]};{[TV]|[{I|L}S]}Q{I|L}[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V]K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V][Q{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}Q{I|L}{M(Oxidation (M))|F}VV{[SA]|[TG]} 5.5263;5.2136;4.7248;4.412;4.0134;3.3403;3.2118;2.6857;2.6142;2.5332 +;-;-;-;-;-;-;-;-;- + 362 + 1 1.169 66525.0 1.0 12722 5764 18471 HBL1_DMSO_200M_050219_1,18488 HBL1_DMSO_200M_050219_1,18488,SIAGIFKEV True True SIAGIFKEV 88.507145 482.279132068157 15476773.0 18471.0 nc|ENSG00000080189|Q9NQQ7-3|SLC35C2;;ENSG00000080189|ENST00000372230|SLC35C2;;ENST00000493599.1_1_20:44979343-44980935:-|nuORF;;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;;ENST00000480329.5_1_20:44979343-44983832:-|nuORF 5.128117720286052 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18489 88.513 333.0 351380.0 25 0 30880.0 + 29482 QLKDIFSEV 9 159 539.7916365735447 1077.5687202138893 2 539.7936279177666 MULTI CID FTMS 0 0 0 18471 189703.265625 0.8173884468580759 -1 0.1200485229492187 18 Unmodified _QLKDIFSEV_ ENSG00000101811|ENST00000372972|CSTF2;ENSG00000177613|ENST00000331173|CSTF2T;nc|ENSG00000101811|P33240-2|CSTF2 71.92227651296345 0.0203558744033348 3 [{M(Oxidation (M))|F}V]SRRWEV 8 7 + 31.155 0.0 0.0 2.8913 2.8913 66.819 0.0 0.0 0.0 0.1338427961678299 4.771212547196626 0.1338427961678299 0.1338427961678299 0 0.2887254899964357 0.8860566476931632 1.5 0.3807196863200844 [{M(Oxidation (M))|F}V]SRRWEV;{NN|[MP]|[D{I|L}]|[EV]}K[Q{I|L}]{M(Oxidation (M))|F}S{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}K[Q{I|L}]ES[{M(Oxidation (M))|F}V];[{M(Oxidation (M))|F}V]SRRWD{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{M(Oxidation (M))|F}[Q{I|L}]S{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}SR[RV]S[{M(Oxidation (M))|F}V];[Q{I|L}]AA[{I|L}T]{M(Oxidation (M))|F}S{NN|[MP]|[D{I|L}]|[EV]};[Q{I|L}]AA[{I|L}T]ES[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}SKK{I|L}E[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}KD[RV]S[{M(Oxidation (M))|F}V] 2.8913;2.8788;2.8784;2.4485;2.1722;2.1717;1.9336;1.9332;1.845;1.729 -;-;-;-;-;-;-;-;-;- 1890 + 1 1.169 94264.4 1.0 12723 5764 18471 HBL1_DMSO_200M_050219_1,18489 HBL1_DMSO_200M_050219_1,18489,QLKDIFSEV True True QLKDIFSEV 88.513197 539.793627917767 2126467.75 18471.0 ENSG00000177613|ENST00000331173|CSTF2T;;ENSG00000101811|ENST00000372972|CSTF2;;nc|ENSG00000101811|P33240-2|CSTF2 5.901981830596924 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18490 88.527 798.0 198340.0 25 0 9597.3 -1 0 145 880.8978054364103 1759.7810579396205 2 881.3986694216728 MULTI CID FTMS 0 0 0 18471 186855.828125 0.5257273674446413 3 -0.28857421875 19 3 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 12 -1 58.702 0.0 0.0 3.3358 0.0 0.0 335.1239186017594 0.0 335.1239186017594 0.0 38.222594160714 0.0 0.0 0 0.6435078169319297 0.0 0.0 0.75 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 3.3358 - 2964 1 1.169 107623.7 1.0 12724 5764 18471 HBL1_DMSO_200M_050219_1,18490 HBL1_DMSO_200M_050219_1,18490, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18491 88.54 778.0 263160.0 25 0 29570.0 24667 MLTLPTFPVV 10 207 559.3220898734072 1116.6296268136143 2 559.3225585818291 MULTI CID FTMS 0 0 0 18471 185118.5625 0.020573220986582 8 -0.7460784912109375 20 Unmodified _MLTLPTFPVV_ ENSG00000157152|ENST00000621198|SYN2;nc|ENSG00000157152|Q92777-2|SYN2 26.88365393820708 0.3646707531412818 3 {NN|[MP]|[D{I|L}]|[EV]}QRQ{M(Oxidation (M))|F}{I|L}VV 9 6 + 57.09 0.0 0.0 5.1127 5.1127 83.58 0.0 0.0 0.0 8.990250088306908 16.478174818886373 8.990250088306908 8.750612633917001 0 0.6549471895720985 1.154901959985743 0.0731074559755159 0.2396518287104437 {NN|[MP]|[D{I|L}]|[EV]}QRQ{M(Oxidation (M))|F}{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[HK]{M(Oxidation (M))|F}{I|L}VV;{[QN]|[E{I|L}]|[KN]}NRQ{M(Oxidation (M))|F}{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}[AG]RQ{M(Oxidation (M))|F}{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}QR[AG]{M(Oxidation (M))|F}{I|L}VV;{[QV]|[N{I|L}]|[RA]|[KV]}ERQ{M(Oxidation (M))|F}{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}QK[R{M(Oxidation (M))|F}]{I|L}VV;{[QN]|[E{I|L}]|[KN]}Q[RN]{M(Oxidation (M))|F}{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}AA[RN]{M(Oxidation (M))|F}{I|L}VV;{[QV]|[N{I|L}]|[RA]|[KV]}A[DV]Q{M(Oxidation (M))|F}{I|L}VV 5.1127;4.329;4.3076;4.288;4.288;4.2202;3.7031;3.6816;3.6621;3.5942 -;-;-;-;-;-;-;-;-;- 5738 1 1.169 155987.8 1.0 12725 5764 18471 HBL1_DMSO_200M_050219_1,18491 HBL1_DMSO_200M_050219_1,18491,MLTLPTFPVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18493 88.545 7.7 7644400.0 25 0 2295100.0 + 16419 DARTFYII 8 56 499.769056133804 997.523559334408 2 499.7692443728447 MULTI CID FTMS 0 0 0 18492 8173589.5 1.0 0 0.0 1 Unmodified _IYWGAYLL_ ENSG00000181029|ENST00000596148|TRAPPC5 24.20995872069341 0.5349487244130675 3 Y{I|L}{I|L} 3 5 32.435 0.0 0.0 3.2516 0.0 0.0 590.2817262406218 0.0 590.2817262406218 0.0 21.46591250700361 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + Y{I|L}{I|L} 3.2516 + + 44 1 1.188 49067.8 1.0 12726 5765 18492 HBL1_DMSO_200M_050219_1,18493 HBL1_DMSO_200M_050219_1,18493,IYWGAYLL False False DARTFYII 88.544909 499.769244372845 77208296.0 18492.0 ENSG00000181029|ENST00000596148|TRAPPC5 1.7912968794504802 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18494 88.546 55.0 1248600.0 25 0 121390.0 + 23602 LTPLPPRQFA 10 86 570.3313062971336 1138.648059661067 2 570.3318359255791 MULTI CID FTMS 0 0 0 18492 1092649.375 0.6494199407370161 -2 0.21063232421875 2 Unmodified _LTPLPPRQFA_ REV__ENST00000280562.9_1_12:123476423-123479403:-|nuORF 14.838274106304384 0.5985701837916485 3 [{I|L}P]T{I|L}P{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]} 11 -1 + 53.388 0.0 0.0 4.6887 4.6887 79.506 0.0 0.0 0.0 5.566370884603529 7.367585652254192 5.566370884603529 5.496812376923046 0 0.5 0.7695510786217261 1.524227503252014 0.0 [{I|L}P]T{I|L}P{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]};[{I|L}P]{I|L}TP{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]};[TP]{I|L}{I|L}P{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]};[{I|L}P]TP{I|L}{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]};[TP]{I|L}P{I|L}{I|L}{[MG]|[TS]}{I|L}{[QG]|[NA]};[{I|L}P]T{I|L}{[MG]|[TS]}[{I|L}P]{I|L}{[QG]|[NA]};[{I|L}P]{I|L}T{[MG]|[TS]}[{I|L}P]{I|L}{[QG]|[NA]};[TP]{I|L}{I|L}{[MG]|[TS]}[{I|L}P]{I|L}{[QG]|[NA]};[{I|L}P][VP]P[YR]{I|L}{[QG]|[NA]};[{I|L}P][VP]P{I|L}[YR]{[QG]|[NA]} 4.6887;4.2059;4.1998;3.8743;3.3854;2.8907;2.408;2.4019;1.1953;0.66659 -;-;-;-;-;-;-;-;-;- 255 1 1.188 59781.6 1.0 12727 5765 18492 HBL1_DMSO_200M_050219_1,18494 HBL1_DMSO_200M_050219_1,18494,LTPLPPRQFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18495 88.548 13.0 6316000.0 25 0 548760.0 + 15082 IMLEALERV 9 84 537.3040469435826 1072.5935409539652 2 537.3057739138603 MULTI CID FTMS 0 0 0 18492 2401905.0 0.416751252125047 -2 0.21063232421875 3 Unmodified _IMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 34.93206674587334 0.1032771302489716 3 {I|L}M{I|L}EA{I|L}E[RV] 9 0 + 80.143 0.0 0.0 7.4719 7.4719 87.514 0.0 0.0 0.0 45.72605212558997 4.137342758552691 4.137342758552691 4.771212547196626 0 0.805462187404089 2.0 0.3494850021680094 0.0 + + {I|L}M{I|L}EA{I|L}E[RV];M{I|L}{I|L}EA{I|L}E[RV];{I|L}M{I|L}EA{I|L}[RD]{I|L};M{I|L}{I|L}EA{I|L}[RD]{I|L};{I|L}MV[DV]{I|L}E[RV];{I|L}MQ[KG]{I|L}E[RV];M{I|L}V[DV]{I|L}E[RV];{I|L}MV[DV]{I|L}[RD]{I|L};M{I|L}Q[KG]{I|L}E[RV];{I|L}MQ[KG]{I|L}[RD]{I|L} 7.4719;7.0271;6.9647;6.5198;5.1594;4.8788;4.7146;4.6522;4.434;4.3715 +;-;-;-;-;-;-;-;-;- + 607 + 1 1.188 70940.9 1.0 12728 5765 18492 HBL1_DMSO_200M_050219_1,18495 HBL1_DMSO_200M_050219_1,18495,IMLEALERV True True IMLEALERV 88.547509 537.30577391386 233330912.0 18492.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 4.580580711364746 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18496 88.549 38.0 1410900.0 25 0 178900.0 + 129 AALEEADKMFL 11 76 619.3099869338249 1236.6054209344495 2 619.3107177615166 MULTI CID FTMS 0 0 0 18492 1221787.75 0.1697530289576451 -3 0.3734283447265625 4 Unmodified _AALEEADKMFL_ ENSG00000255302|ENST00000530028|EID1;nc|ENSG00000255302|Q9Y6B2-2|EID1 79.42699986076722 0.0080827643292781 3 AATAMEE{I|L}AA{M(Oxidation (M))|F}{I|L} 12 7 + 69.233 0.0 0.0 5.5987 5.5987 77.186 0.0 0.0 0.0 5.424299842973589 13.5676646604105 5.424299842973589 1.7445319900276388 0 0.3807196863200844 1.2218487496163564 1.7447026752325154 0.0 AATAMEE{I|L}AA{M(Oxidation (M))|F}{I|L};AA{I|L}EEADKM{M(Oxidation (M))|F}{I|L};AATAEME{I|L}AA{M(Oxidation (M))|F}{I|L};AA{I|L}E[CS]E{I|L}AA{M(Oxidation (M))|F}{I|L};[{I|L}A]AEEADKM{M(Oxidation (M))|F}{I|L};AA{I|L}EGMM[RV]{M(Oxidation (M))|F}{I|L};AATAME[RP]M{M(Oxidation (M))|F}{I|L};[{I|L}A]AE[CS]E{I|L}AA{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}AAEADKM{M(Oxidation (M))|F}{I|L};AA{I|L}[CS]EE{I|L}AA{M(Oxidation (M))|F}{I|L} 5.5987;5.4576;5.3552;5.3074;5.16;5.1369;5.0444;5.0098;4.9574;4.9031 -;+;-;-;-;-;-;-;-;- + 2925 1 1.188 46101.1 1.0 12729 5765 18492 HBL1_DMSO_200M_050219_1,18496 HBL1_DMSO_200M_050219_1,18496,AALEEADKMFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18497 88.55 66.0 1142600.0 25 0 166390.0 + 12370 GTFDNIYLHV 10 108 589.7953098073901 1177.5760666815802 2 589.7958862185478 MULTI CID FTMS 0 0 0 18492 937592.875 1.0 0 0.0 5 Unmodified _GTFDNIYLHV_ ENSG00000121579|ENST00000240922|NAA50 36.12702656103203 0.1984647928738587 3 {[SA]|[TG]}{M(Oxidation (M))|F}DN{I|L}Y{I|L}VH 10 2 + 73.658 0.0 0.0 6.255 6.255 77.614 0.0 0.0 0.0 22.498774732166005 0.6366907986937917 0.6366907986937917 0.6366907986937917 0 0.3252574989159953 1.5228787452803376 0.3807196863200844 0.0 {[SA]|[TG]}{M(Oxidation (M))|F}DN{I|L}Y{I|L}VH;{[SA]|[TG]}{M(Oxidation (M))|F}DN{I|L}Y{I|L}HV;{[SA]|[TG]}{M(Oxidation (M))|F}DGG{I|L}Y{I|L}VH;{[SA]|[TG]}{M(Oxidation (M))|F}DGG{I|L}Y{I|L}HV;{[SA]|[TG]}{M(Oxidation (M))|F}DN{I|L}Y[HV]{I|L};{[SA]|[TG]}{M(Oxidation (M))|F}DGG{I|L}Y[HV]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[R{M(Oxidation (M))|F}]{I|L}ND{[WT]|[RM]};[KA][PA]Y{I|L}ND{[WT]|[RM]};{[SA]|[TG]}{M(Oxidation (M))|F}[RN]P[RD]C{I|L};{[SA]|[TG]}[PS]YP[RN]{[WT]|[RM]} 6.255;6.201;5.4768;5.4227;4.8479;4.0696;2.6078;2.3805;2.1508;1.9018 -;+;-;-;-;-;-;-;-;- + 791 + 1 1.188 60640.5 1.0 12730 5765 18492 HBL1_DMSO_200M_050219_1,18497 HBL1_DMSO_200M_050219_1,18497,GTFDNIYLHV False True GTFDNIYLHV 88.550288 589.795886218548 22782720.0 18492.0 ENSG00000121579|ENST00000240922|NAA50 9.082801342010498 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18498 88.553 155.0 1029300.0 25 0 135900.0 + 9439 FLASESLIKQI 11 124 624.8635046543417 1247.7124563754833 2 624.8638793826103 MULTI CID FTMS 0 0 0 18492 660183.0625 0.4934716296520747 -2 0.21063232421875 6 Unmodified _FLASESLIKQI_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 147.24064527209634 0.0010718819277248 3 {M(Oxidation (M))|F}{I|L}ASES{I|L}{I|L}KQ{I|L} 11 0 + 102.35 0.0 0.0 8.2033 8.2033 95.22 0.0 0.0 0.0 37.958447904804814 18.02433894081399 18.02433894081399 12.935695106011837 0 2.4361818737241734 0.0 0.7059771852360797 1.7803695511246984 + + {M(Oxidation (M))|F}{I|L}ASES{I|L}{I|L}KQ{I|L};{M(Oxidation (M))|F}{I|L}ASES{I|L}{I|L}K[AG]{I|L};{[TV]|[{I|L}S]}ESA{I|L}KGA{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SSA{I|L}KGA{I|L}{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}{I|L}{[WT]|[RM]}S{I|L}{I|L}KQ{I|L};{[TV]|[{I|L}S]}ES{I|L}AKGA{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SS{I|L}AKGA{I|L}{M(Oxidation (M))|F}{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}SA{I|L}KGA{I|L}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}ESA{I|L}KQ{I|L}{M(Oxidation (M))|F}{I|L};{[ES]|[DT]|[{I|L}C]}S{I|L}A{I|L}KGA{I|L}{M(Oxidation (M))|F}{I|L} 8.2033;7.1665;6.2106;5.9527;5.9307;5.8487;5.5908;5.4574;5.4359;5.3114 +;-;-;-;-;-;-;-;-;- + 5481 + 1 1.188 125247.3 1.0 12731 5765 18492 HBL1_DMSO_200M_050219_1,18498 HBL1_DMSO_200M_050219_1,18498,FLASESLIKQI True True FLASESLIKQI 88.553368 624.86387938261 20720462.0 18492.0 ENST00000478340.2_1_6:35437033-35438524:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;;ENSG00000198755|ENST00000322203|RPL10A 5.010214328765869 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18499 88.556 121.0 726350.0 25 0 50189.0 + -1 ISRELFCGEM 10 97 600.7729621778176 1199.531371422435 2 600.7739135622978 MULTI CID FTMS 0 0 0 18492 409070.15625 0.6534563951567058 1 -0.1203155517578125 7 Oxidation (M) _ISRELFCGEM(Oxidation (M))_ REV__ENST00000607670.1_1_1:6454018-6454348:+|nuORF 8.745405648335112 0.6861838735306406 3 D{I|L}{M(Oxidation (M))|F}D[RP]V 7 -1 41.986 0.0 0.0 3.5002 0.0 0.0 339.0916876715113 0.0 339.0916876715113 0.0 29.282891498745585 0.0 0.0 0 0.9247425010840048 0.0 0.3252574989159953 0.7302046884880937 D{I|L}{M(Oxidation (M))|F}D[RP]V 3.5002 - 231 + 1 1.188 67445.5 1.0 12732 5765 18492 HBL1_DMSO_200M_050219_1,18499 HBL1_DMSO_200M_050219_1,18499,ISRELFCGEM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18500 88.559 182.0 562590.0 25 0 35110.0 + 18217 KVFEHFLENL 10 122 638.3406295366243 1274.6667061400483 2 638.3411743044853 MULTI CID FTMS 0 0 0 18492 365423.40625 0.7557923043492761 -1 0.0905838012695312 8 Unmodified _KVFEHFLENL_ ENSG00000198056|ENST00000338193|PRIM1 39.21299971606389 0.1658776112144286 3 [{I|L}P]{I|L}[WM]{M(Oxidation (M))|F}{I|L}ED 9 7 44.359 0.0 0.0 3.48 0.0 0.0 0.0 127.08440743077485 127.08440743077485 9.542425094393243 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.4247425010840047 0.0 [{I|L}P]{I|L}[WM]{M(Oxidation (M))|F}{I|L}ED 3.48 - 1620 1 1.188 85647.9 1.0 12733 5765 18492 HBL1_DMSO_200M_050219_1,18500 HBL1_DMSO_200M_050219_1,18500,KVFEHFLENL False True KVFEHFLENL 88.559432 638.341174304485 11466129.125 18492.0 ENSG00000198056|ENST00000338193|PRIM1 6.5852382977803545 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18501 88.566 349.0 477820.0 25 0 50530.0 + 34824 SQFPGAITL 9 159 467.2553476162436 932.4961422992872 2 467.2554199099541 MULTI CID FTMS 0 0 0 18492 275769.6875 0.5282765203238444 9 -0.8374252319335938 9 Unmodified _SQFPGAITL_ ENST00000263083.10_1_17:1944800-1946395:+|nuORF;ENST00000571710.5_1_17:1945525-1946395:+|nuORF;nc|ENSG00000262664|Q8WZ82|OVCA2 39.94969957227396 0.0757326808254658 3 {[VA]|[{I|L}G]}APGAS{M(Oxidation (M))|F}T{I|L} 10 5 + 40.599 0.0 0.0 4.3538 4.3538 73.089 0.0 0.0 0.0 8.113196136362987 8.947340481202062 8.113196136362987 1.7609125905568064 0 0.8182503180159344 1.5228787452803376 0.6307196863200843 0.0 {[VA]|[{I|L}G]}APGAS{M(Oxidation (M))|F}T{I|L};{[VA]|[{I|L}G]}APQS{M(Oxidation (M))|F}T{I|L};{[VA]|[{I|L}G]}APTN{M(Oxidation (M))|F}T{I|L};[{I|L}P]QGAS{M(Oxidation (M))|F}T{I|L};[QP]{I|L}GAS{M(Oxidation (M))|F}T{I|L};{[VA]|[{I|L}G]}MA{[QS]|[NT]}{I|L}T{I|L};[{I|L}P]QQS{M(Oxidation (M))|F}T{I|L};[{I|L}P]QTN{M(Oxidation (M))|F}T{I|L};[QP]{I|L}QS{M(Oxidation (M))|F}T{I|L};[QP]{I|L}TN{M(Oxidation (M))|F}T{I|L} 4.3538;4.165;4.1362;3.4838;3.4381;3.3621;3.3007;3.272;3.2551;3.2263 -;-;-;-;-;-;-;-;-;- 1816 1 1.188 128791.9 1.0 12734 5765 18492 HBL1_DMSO_200M_050219_1,18501 HBL1_DMSO_200M_050219_1,18501,SQFPGAITL True True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 18502 88.568 126.0 325570.0 25 0 35069.0 -1 PFCEMGVLGS 10 71 556.7394166058754 1111.4642802785506 2 557.2409545779228 MULTI CID FTMS 0 0 0 18492 277195.9375 0.714860498051601 -2 0.21063232421875 10 Carbamidomethyl (C),Oxidation (M) _PFC(Carbamidomethyl (C))EM(Oxidation (M))GVLGS_ ENST00000407418.7_1_22:39259026-39259239:-|nuORF 7.289230182591677 0.6929195370588109 3 Y{I|L} 2 -1 14.949 0.0 0.0 1.3449 0.0 0.0 817.3060904365569 0.0 817.3060904365569 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 1.3449 - 46 + 1 1.188 36581.3 1.0 12735 5765 18492 HBL1_DMSO_200M_050219_1,18502 HBL1_DMSO_200M_050219_1,18502,PFCEMGVLGS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18503 88.575 353.0 290390.0 25 0 43854.0 + 21460 LPHLVVSI 8 117 439.2787278575557 876.5429027819115 2 439.2792541384697 MULTI CID FTMS 0 0 0 18492 273560.15625 0.1094732159739723 -5 0.5095596313476562 11 Unmodified _LPHLVVSI_ ENSG00000119285|ENST00000366582|HEATR1 38.99230528602208 0.2511498934509823 3 [H{I|L}]P{I|L}VVS{I|L} 8 2 + 48.026 0.0 0.0 5.479 5.479 78.984 0.0 0.0 0.0 8.965912507003608 10.172203223519531 8.965912507003608 3.0102999566398125 0 0.8182503180159344 1.2218487496163564 0.0 0.0 [H{I|L}]P{I|L}VVS{I|L};[H{I|L}]VP{I|L}VS{I|L};[H{I|L}]PV{I|L}VS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}VVS{I|L};[{I|L}P]H{I|L}VVS{I|L};[H{I|L}]PVV{I|L}S{I|L};[H{I|L}]VPV{I|L}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}VS{I|L};[{I|L}P]HV{I|L}VS{I|L};[H{I|L}]VVP{I|L}S{I|L} 5.479;5.1355;5.1355;4.4561;4.4521;4.4487;4.4487;4.1127;4.1087;3.828 -;-;-;-;+;-;-;-;-;- + 295 1 1.188 87691.2 1.0 12736 5765 18492 HBL1_DMSO_200M_050219_1,18503 HBL1_DMSO_200M_050219_1,18503,LPHLVVSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18504 88.577 110.0 644490.0 25 0 75224.0 + 953 AFLGVKERL 9 97 516.813882538832 1031.613212144464 2 516.8140136599541 MULTI CID FTMS 0 0 0 18492 228593.703125 1.0 0 0.0 12 Unmodified _AFLGVKERL_ REV__ENSG00000116584|ENST00000361247|ARHGEF2;REV__nc|ENSG00000116584|Q92974-2|ARHGEF2;REV__nc|ENSG00000116584|Q92974-3|ARHGEF2 32.30548876998284 0.1201446275138228 3 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DVK{I|L}N{I|L} 9 -1 + 43.031 0.0 0.0 4.1712 4.1712 77.447 0.0 0.0 0.0 3.1234684152074976 25.59562510389476 3.1234684152074976 4.987737688117228 0 1.0 0.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DVK{I|L}N{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}VRS{I|L}N{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}DVK{I|L}GG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ADVK{I|L}N{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}VRS{I|L}GG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVRS{I|L}N{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ADVK{I|L}GG{I|L};{[QN]|[E{I|L}]|[KN]}[RK]{M(Oxidation (M))|F}{I|L}N{I|L};{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]K{I|L}N{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[{I|L}A]{[SA]|[TG]}{I|L}N{I|L} 4.1712;3.6877;3.2786;3.1395;2.7951;2.6561;2.2469;2.1114;1.9903;1.8739 -;-;-;-;-;-;-;-;-;- 546 1 1.188 60189.6 1.0 12737 5765 18492 HBL1_DMSO_200M_050219_1,18504 HBL1_DMSO_200M_050219_1,18504,AFLGVKERL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18505 88.579 94.0 618220.0 25 0 54199.0 + -1 LVNCAQDCF 9 85 563.7341869976059 1125.4538210620117 2 563.7345458865166 MULTI CID FTMS 0 0 0 18492 213716.765625 1.0 0 0.0 13 2 Carbamidomethyl (C) _LVNC(Carbamidomethyl (C))AQDC(Carbamidomethyl (C))F_ REV__ENSG00000111670|ENST00000299314|GNPTAB 12.531546534597751 0.4974689918368763 3 {I|L}Y 2 -1 30.177 0.0 0.0 2.6813 0.0 0.0 0.0 846.2849321700243 846.2849321700243 11.989700043360193 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 {I|L}Y 2.6813 - 97 + 1 1.188 49716.3 1.0 12738 5765 18492 HBL1_DMSO_200M_050219_1,18505 HBL1_DMSO_200M_050219_1,18505,LVNCAQDCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18506 88.584 264.0 549610.0 25 0 48157.0 + 42764 VVHEDLRLLL 10 129 402.91158033212383 1205.7129115965715 3 402.9117309451103 MULTI CID FTMS 0 0 0 18492 203916.5625 1.0 0 0.0 14 Unmodified _VVHEDLRLLL_ ENSG00000101361|ENST00000329276|NOP56 33.82136114134338 0.222812100547209 3 VVS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AVV{I|L}{I|L}{I|L} 11 6 + 46.541 0.0 0.0 3.8601 3.8601 69.895 0.0 0.0 0.0 0.6092167556056793 3.670342632067978 0.6092167556056793 0.6092167556056793 0 1.3480469199457366 1.0969100130080565 0.0 0.0 VVS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AVV{I|L}{I|L}{I|L};[{I|L}A]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AVV{I|L}{I|L}{I|L};VVSV{[YC]|[HE]}VV{I|L}{I|L}{I|L};[{I|L}A]TV{[YC]|[HE]}VV{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}A{I|L}{[YC]|[HE]}VV{I|L}{I|L}{I|L};VVS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A{I|L}VV{I|L}{I|L};[{I|L}A]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A{I|L}VV{I|L}{I|L};VVSV{[YC]|[HE]}{I|L}VV{I|L}{I|L};[{I|L}A]S{I|L}{[YC]|[HE]}VV{I|L}{I|L}{I|L};[{I|L}A]TV{[YC]|[HE]}{I|L}VV{I|L}{I|L} 3.8601;3.8095;3.7575;3.7069;3.6837;3.6104;3.5599;3.5078;3.4573;3.4573 -;-;-;-;-;-;-;-;-;- 1344 1 1.188 114436.4 1.0 12739 5765 18492 HBL1_DMSO_200M_050219_1,18506 HBL1_DMSO_200M_050219_1,18506,VVHEDLRLLL False True VVHEDLRLLL 88.583953 402.91173094511 1899318.375 18492.0 ENSG00000101361|ENST00000329276|NOP56 4.102859814961751 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18507 88.598 800.0 382520.0 25 0 28851.0 + 29801 QQFEGYGLEI 10 221 592.2854766901747 1182.5564004471494 2 592.2843505740166 MULTI CID FTMS 0 0 0 18492 193371.5625 0.9188864140124652 -2 0.21063232421875 15 Unmodified _QQFEGYGLEI_ ENSG00000198498|ENST00000358572|TMA16 41.8396318013385 0.1381409678234242 3 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}NVV 9 9 45.586 0.0 0.0 3.8549 0.0 0.0 0.0 127.92978846888684 127.92978846888684 27.503797166331186 0.0 0.0 0.0 0 0.0 1.154901959985743 0.4538271422956003 0.0 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}NVV 3.8549 - 2726 1 1.188 224593.5 1.0 12740 5765 18492 HBL1_DMSO_200M_050219_1,18507 HBL1_DMSO_200M_050219_1,18507,QQFEGYGLEI False True QQFEGYGLEI 88.597786 592.284350574017 2034864.125 18492.0 ENSG00000198498|ENST00000358572|TMA16 1.889594132701556 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18508 88.611 772.0 178400.0 25 0 15521.0 -1 0 140 981.949730622343 1961.884908311486 2 981.950732409954 MULTI CID FTMS 0 0 0 18492 188365.21875 1.0 0 0.0 16 3 [YQ]{I|L}ENY 6 -1 40.693 0.0 0.0 2.0742 0.0 0.0 0.0 1148.5068314894736 1148.5068314894736 13.245397123361968 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.25 1.1989700043360187 [YQ]{I|L}ENY 2.0742 - 4256 1 1.188 93800.3 1.0 12741 5765 18492 HBL1_DMSO_200M_050219_1,18508 HBL1_DMSO_200M_050219_1,18508, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18509 88.625 800.0 210720.0 25 0 22443.0 + 10478 FTPDVKVWEV 10 163 610.3207465308926 0 610.3216430544853 PEAK CID FTMS 0 0 0 18492 172928.875 1.0 0 0.0 17 Unmodified _FTPDVKVWEV_ ENSG00000106638|ENST00000305632|TBL2;ENST00000488915.1_1_7:72984839-72985682:-|nuORF 14.40537977576856 0.3413947114044073 3 VN{I|L}G 4 9 16.152 0.0 0.0 1.3254 0.0 0.0 609.3092654233102 223.0729464166625 832.3822118399727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6203715150305281 VN{I|L}G 1.3254 - 376 + 1 1.188 125939.1 0.959999978542328 12742 5765 18492 HBL1_DMSO_200M_050219_1,18509 HBL1_DMSO_200M_050219_1,18509,FTPDVKVWEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18510 88.633 363.0 262140.0 25 0 34938.0 + 39549 VAYEIMQTL 9 167 534.2765373539366 1066.5385217746732 2 534.2761718630791 MULTI CID FTMS 0 0 0 18492 158410.8125 1.0 0 0.0 18 Unmodified _VAYEIMQTL_ ENSG00000033170|ENST00000673929|FUT8;nc|ENSG00000033170|Q9BYC5-3|FUT8;nc|ENSG00000033170|Q9BYC5-4|FUT8 32.30548876998284 0.1201446275138228 3 {[QN]|[E{I|L}]|[KN]}YG{I|L}M[WR] 8 6 + 25.347 0.0 0.0 2.3766 2.3766 70.91 0.0 0.0 0.0 5.756017836617236 3.979400086720375 3.979400086720375 3.0102999566398125 0 0.2396518287104437 0.958607314841775 0.0 0.0 {[QN]|[E{I|L}]|[KN]}YG{I|L}M[WR];{[QN]|[E{I|L}]|[KN]}YAVM[WR];{NN|[MP]|[D{I|L}]|[EV]}PH{I|L}M[WR];[WY]{I|L}WWT{I|L};[YE]{I|L}G{I|L}M[WR];[YE]{I|L}AVM[WR];{[VA]|[{I|L}G]}[YE]{I|L}M[WR];[WY]{I|L}{[DA]|[EG]}WT{I|L};[VP]EH{I|L}M[WR];[{I|L}T]{M(Oxidation (M))|F}DVM[WR] 2.3766;2.0944;1.8369;1.7402;1.6858;1.4036;1.2218;0.86535;0.83907;0.79017 -;-;-;-;-;-;-;-;-;- 1150 1 1.188 76638.1 1.0 12743 5765 18492 HBL1_DMSO_200M_050219_1,18510 HBL1_DMSO_200M_050219_1,18510,VAYEIMQTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18511 88.647 800.0 156050.0 25 0 10530.0 + -1 INEAMQWIQMI 11 143 696.8368007342594 1391.6590485353188 2 696.8384887576103 MULTI CID FTMS 0 0 0 18492 124895.59375 1.0 0 0.0 19 Oxidation (M) _INEAM(Oxidation (M))QWIQMI_ REV__ENSG00000102054|ENST00000380087|RBBP7;REV__nc|ENSG00000102054|Q16576-2|RBBP7 8.745405648335112 0.8338865417133445 3 {I|L}{I|L}{[CA]|SS}[EP]D{I|L}{I|L}{I|L}N 11 -1 42.535 0.0 0.0 3.0564 0.0 0.0 0.0 193.9988583040856 193.9988583040856 24.53334809738468 0.0 0.0 0.0 0 1.3494850021680094 1.3010299956639813 0.0 0.0 {I|L}{I|L}{[CA]|SS}[EP]D{I|L}{I|L}{I|L}N 3.0564 - 851 1 1.188 96581.0 0.7900000214576721 12744 5765 18492 HBL1_DMSO_200M_050219_1,18511 HBL1_DMSO_200M_050219_1,18511,INEAMQWIQMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18512 88.661 800.0 147580.0 25 0 5902.2 -1 0 121 1066.9989350293215 0 1066.997485339642 PEAK CID FTMS 0 0 0 18492 125179.6015625 0.8407317745303065 1 -0.1203155517578125 20 3 Y[C(Carbamidomethyl (C))M]TQM{I|L}G{I|L} 9 -1 38.867 0.0 0.0 1.823 0.0 0.0 742.3662039436057 289.08222376041255 1031.4484277040185 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.3807196863200844 0.2614393726401688 Y[C(Carbamidomethyl (C))M]TQM{I|L}G{I|L} 1.823 - 9882 + 1 1.188 78065.2 0.8100000023841858 12745 5765 18492 HBL1_DMSO_200M_050219_1,18512 HBL1_DMSO_200M_050219_1,18512, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18514 88.665 10.0 4373000.0 25 0 712510.0 45754 YYISPRLTF 9 42 580.3108966406983 1158.6072403481965 2 580.3116332888603 MULTI CID FTMS 0 0 0 18513 4295292.5 0.1214287261068852 3 -0.2392730712890625 1 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 29.081581746732265 0.1611639662936252 3 YY{I|L}S 4 5 65.433 0.0 0.0 5.6476 0.0 0.0 0.0 629.3417005273634 629.3417005273634 58.44335023848103 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + YY{I|L}S 5.6476 + + 17 + 1 1.197 39662.0 1.0 12746 5766 18513 HBL1_DMSO_200M_050219_1,18514 HBL1_DMSO_200M_050219_1,18514,YYISPRLTF False True YYISPRITF 88.665225 580.31163328886 1422084096.0 18513.0 nc|ENSG00000254087|P07948-2|LYN;;ENSG00000136573|ENST00000259089|BLK;;ENSG00000254087|ENST00000519728|LYN 1.7153769731521606 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18515 88.666 27.0 2514800.0 25 0 190550.0 + 29606 QLVRDLLEV 9 83 542.8220182635556 0 542.8219482302666 PEAK CID FTMS 0 0 0 18513 1844716.25 0.4152214680685529 2 -0.1524505615234375 2 Unmodified _QLVRDLLEV_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 103.35351024395868 0.0202588131840038 3 E{I|L}{I|L} 3 7 22.677 0.0 0.0 2.0927 0.0 0.0 117.08021874117726 608.3151949518186 725.3954136929959 0.0 0.0 0.0 0.0 0 0.75 0.0 0.5 0.0 E{I|L}{I|L} 2.0927 - 79 + 1 1.197 57673.1 1.0 12747 5766 18513 HBL1_DMSO_200M_050219_1,18515 HBL1_DMSO_200M_050219_1,18515,QLVRDLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18516 88.668 13.0 5046700.0 25 0 680700.0 + 21490 LPHVPLGVI 9 76 472.7997844401322 943.5850159470646 2 472.8004028201103 MULTI CID FTMS 0 0 0 18513 5275573.5 0.7789089800952439 -1 0.1203155517578125 3 Unmodified _LPHVPLGVI_ ENSG00000115307|ENST00000377526|AUP1;ENST00000462297.1_1_2:74754523-74754670:-|nuORF;ENST00000463900.5_1_2:74753929-74756164:-|nuORF;ENST00000466894.5_1_2:74754206-74756164:-|nuORF;ENST00000486234.1_1_2:74754275-74754965:-|nuORF;nc|ENSG00000115307|Q9Y679-3|AUP1 36.46614268402704 0.0948557732959553 3 [HV]P{I|L}GP{I|L}V{I|L} 9 4 + 79.659 0.0 0.0 8.4421 8.4421 90.406 0.0 0.0 0.0 16.989700043360187 16.478174818886373 16.478174818886373 6.020599913279625 0 0.805462187404089 1.3979400086720375 0.0 0.0 [HV]P{I|L}GP{I|L}V{I|L};[HV]P{I|L}PG{I|L}V{I|L};[HV]P{I|L}GPV{I|L}{I|L};[HV]P{I|L}GVP{I|L}{I|L};[HV]P{I|L}PAVV{I|L};[HV]P{I|L}PGV{I|L}{I|L};[HV]P{I|L}VGP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}GP{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VGP{I|L}V{I|L};[HV]P{I|L}V[PA]V{I|L} 8.4421;7.8041;7.533;7.52;7.2984;6.8949;6.7792;6.6416;6.3225;6.0332 -;-;-;-;-;-;-;-;-;- 626 1 1.197 55119.9 1.0 12748 5766 18513 HBL1_DMSO_200M_050219_1,18516 HBL1_DMSO_200M_050219_1,18516,LPHVPLGVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18517 88.669 13.0 3575200.0 25 0 400220.0 3307 AYLAWLIYSI 10 41 606.8348020248462 1211.6550511164924 2 606.8354369997978 MULTI CID FTMS 0 0 0 18513 4801472.0 0.4246845826258901 -2 0.2108993530273437 4 Unmodified _AYLAWLIYSI_ ENSG00000183307|ENST00000331437|TMEM121B 16.942295170755138 0.5632667538960775 3 {I|L}{I|L}YTV 5 7 29.208 0.0 0.0 2.4106 0.0 0.0 604.2978556157209 0.0 604.2978556157209 0.0 -1.2937092834840769 -1.2937092834840769 0.0 0 0.6989700043360187 0.0 0.0 0.0 {I|L}{I|L}YTV 2.4106 - 30 1 1.197 41761.3 1.0 12749 5766 18513 HBL1_DMSO_200M_050219_1,18517 HBL1_DMSO_200M_050219_1,18517,AYLAWLIYSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18518 88.67 18.0 4429900.0 25 0 529930.0 2341 AQLELISRL 9 78 521.8165366196679 1041.6185203061357 2 521.8166992068291 MULTI CID FTMS 0 0 0 18513 3523449.75 0.9743072738253118 -1 0.1203155517578125 5 Unmodified _AQLELISRL_ ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12 45.739877483867886 0.0497104363764649 3 [QA]{I|L}E{I|L}{I|L}SR{I|L} 9 0 + 68.19 0.0 0.0 6.5465 6.5465 86.952 0.0 0.0 0.0 43.21144659339927 8.197859905088642 8.197859905088642 6.817496819840656 0 1.3807196863200843 0.958607314841775 0.4247425010840047 0.0 + + [QA]{I|L}E{I|L}{I|L}SR{I|L};[QA]{I|L}{I|L}E{I|L}SR{I|L};[QA]{I|L}E{I|L}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]{I|L}{I|L}E{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 6.5465;5.892;5.7586;5.1041 +;-;-;- + 98 + 1 1.197 66889.3 1.0 12750 5766 18513 HBL1_DMSO_200M_050219_1,18518 HBL1_DMSO_200M_050219_1,18518,AQLELISRL True True AQLELISRI 88.66994 521.816699206829 105703128.0 18513.0 nc|ENSG00000065883|Q14004-2|CDK13;;ENSG00000065883|ENST00000181839|CDK13 2.748838186264038 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18519 88.671 48.0 1392500.0 25 0 171120.0 + 25591 NFIEKVEAL 9 98 531.7952446517659 1061.5759363703316 2 531.7956420779228 MULTI CID FTMS 0 0 0 18513 1146624.625 0.0547084063057312 4 -0.3817291259765625 6 Unmodified _NFIEKVEAL_ ENSG00000092201|ENST00000216297|SUPT16H 43.77239144664712 0.0547478964384323 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SR 9 7 + 38.64 0.0 0.0 3.6399 3.6399 69.168 0.0 0.0 0.0 0.5372751160733458 7.2919220901313935 0.5372751160733458 0.5372751160733458 0 1.1069758080123702 0.0 1.4436726795685342 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SR;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[DG]A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[TA]A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}E{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[TA]A{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[DG]A{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}E{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V{[MS]|[{M(Oxidation (M))|F}A]}[TA]A{I|L} 3.6399;3.5893;3.202;2.8177;2.8177;2.814;2.7671;2.7671;2.7634;2.3798 -;-;-;-;-;-;-;-;-;- 986 1 1.197 57273.0 1.0 12751 5766 18513 HBL1_DMSO_200M_050219_1,18519 HBL1_DMSO_200M_050219_1,18519,NFIEKVEAL True True NFIEKVEAL 88.671233 531.795642077923 462029088.0 18513.0 ENSG00000092201|ENST00000216297|SUPT16H 7.097520351409912 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18520 88.674 114.0 1297400.0 25 0 92587.0 -1 0 107 958.960122720601 1915.905692508002 2 959.4620849490166 MULTI CID FTMS 0 0 0 18513 854776.875 0.8955229451223298 -1 0.1203155517578125 7 3 {[QV]|[N{I|L}]|[RA]|[KV]}[DG]V{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 102.11 0.0 0.0 5.3294 5.3294 81.463 0.0 0.0 0.0 18.92544976785331 62.79885926180398 18.92544976785331 5.206604445392827 0 0.9929928190999392 1.3010299956639813 1.110924374808178 2.298455006504028 {[QV]|[N{I|L}]|[RA]|[KV]}[DG]V{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[DG]V[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[DG]{I|L}V[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[DG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[DG]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}V[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RD][YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[DG][Y{M(Oxidation (M))|F}]PQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[R{M(Oxidation (M))|F}]VVCCQNA{M(Oxidation (M))|F}YQV{I|L} 5.3294;5.0576;5.0323;5.0287;5.0034;4.8645;4.8356;4.8058;4.5798;4.4592 -;-;-;-;-;-;-;-;-;- 5425 1 1.197 101421.6 1.0 12752 5766 18513 HBL1_DMSO_200M_050219_1,18520 HBL1_DMSO_200M_050219_1,18520, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18521 88.675 56.0 1420800.0 25 0 213390.0 + 26512 NVGDWLRGV 9 90 508.2690081828018 1014.5234634324036 2 508.2697021365166 MULTI CID FTMS 0 0 0 18513 742580.3125 0.0280288708987533 -5 0.5361709594726562 8 Unmodified _NVGDWLRGV_ ENSG00000214736|ENST00000398881|TOMM6 17.11289562659939 0.3734572693229295 3 {[NV]|[RG]}GDW{I|L} 6 3 26.643 0.0 0.0 2.6262 0.0 0.0 0.0 327.1791170709594 327.1791170709594 13.226825097560418 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {[NV]|[RG]}GDW{I|L} 2.6262 + + 125 + 1 1.197 67914.5 1.0 12753 5766 18513 HBL1_DMSO_200M_050219_1,18521 HBL1_DMSO_200M_050219_1,18521,NVGDWLRGV False True NVGDWLRGV 88.675088 508.269702136517 264896368.0 18513.0 ENSG00000214736|ENST00000398881|TOMM6 6.550957520802816 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18522 88.677 91.0 1066700.0 25 0 152760.0 + 9181 FGGVLILIHR 10 93 375.5692990116058 1123.6860676350177 3 375.5692626833916 MULTI CID FTMS 0 0 0 18513 625226.6875 0.0174694763130494 -4 0.493743896484375 9 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 54.773552608820026 0.052133998764723 3 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 96.439 0.0 0.0 8.5824 8.5824 93.951 0.0 0.0 0.0 84.23385649800063 25.644052927599603 25.644052927599603 9.208187539523747 0 1.0356668758921828 2.0 0.0 1.4478224950233995 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 8.5824;7.7629 -;- 154 + 1 1.197 82473.7 1.0 12754 5766 18513 HBL1_DMSO_200M_050219_1,18522 HBL1_DMSO_200M_050219_1,18522,FGGVLILIHR True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18523 88.679 102.0 893310.0 25 0 67257.0 + 1639 ALMPVLNQV 9 126 492.78096866742857 983.5473844016572 2 492.7814208865166 MULTI CID FTMS 0 0 0 18513 551869.1875 0.2519878713507034 -2 0.2108993530273437 10 Unmodified _ALMPVLNQV_ ENSG00000223496|ENST00000435634|EXOSC6 40.44857923139169 0.0729940656229577 3 [{I|L}A]QKM{M(Oxidation (M))|F} 6 7 34.001 0.0 0.0 3.457 0.0 0.0 0.0 262.1606053726321 262.1606053726321 -2.3737962575791016 0.0 -2.3737962575791016 0.0 0 0.0 1.6989700043360187 0.0 0.8807196863200843 [{I|L}A]QKM{M(Oxidation (M))|F} 3.457 - 1622 1 1.197 72857.8 1.0 12755 5766 18513 HBL1_DMSO_200M_050219_1,18523 HBL1_DMSO_200M_050219_1,18523,ALMPVLNQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18524 88.682 138.0 956730.0 25 0 229960.0 40915 VLSLCMSL 8 127 433.2294435825984 864.4443342319969 2 433.2298461794853 MULTI CID FTMS 0 0 0 18513 523120.15625 0.8019473896562392 -1 0.1203155517578125 11 Unmodified _VLSLCMSL_ ENSG00000162009|ENST00000689027|SSTR5 40.44857923139169 0.2267865117615937 3 {[TV]|[{I|L}S]}V{I|L} 4 5 33.377 0.0 0.0 3.8611 0.0 0.0 0.0 449.1521949099844 449.1521949099844 17.290689164725286 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.5356668758921829 0.0 {[TV]|[{I|L}S]}V{I|L} 3.8611 - 326 1 1.197 107318.0 1.0 12756 5766 18513 HBL1_DMSO_200M_050219_1,18524 HBL1_DMSO_200M_050219_1,18524,VLSLCMSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18525 88.684 85.0 1144700.0 25 0 167680.0 + 14832 ILFSEGLIKA 10 122 545.8291365381111 1089.6437201430222 2 545.8298217654228 MULTI CID FTMS 0 0 0 18513 519270.71875 0.579253263015109 -1 0.1203155517578125 12 Unmodified _ILFSEGLIKA_ ENSG00000039123|ENST00000230640|MTREX 55.50274090549119 0.048383292844968 3 {I|L}{I|L}{M(Oxidation (M))|F}SEG{I|L}{I|L}[KA] 10 0 + 62.177 0.0 0.0 5.7062 5.7062 85.765 0.0 0.0 0.0 23.838031200885155 5.902887499330731 5.902887499330731 8.992114694466693 0 1.079689690656103 2.0 0.3494850021680094 0.2302046884880938 + + {I|L}{I|L}{M(Oxidation (M))|F}SEG{I|L}{I|L}[KA];{I|L}{I|L}{M(Oxidation (M))|F}SEG{I|L}[KA]{I|L} 5.7062;4.881 +;- + 932 + 1 1.197 75840.4 1.0 12757 5766 18513 HBL1_DMSO_200M_050219_1,18525 HBL1_DMSO_200M_050219_1,18525,ILFSEGLIKA True True ILFSEGLIKA 88.683952 545.829821765423 5884211.0 18513.0 ENSG00000039123|ENST00000230640|MTREX 5.146407763163249 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18526 88.686 70.0 1491900.0 25 0 164050.0 + 14695 IIVDEAICSM 10 127 547.266353952815 1092.51815497243 2 547.2690307497978 MULTI CID FTMS 0 0 0 18513 348695.5 0.0618215191305232 -3 0.3309478759765625 13 Unmodified _IIVDEAICSM_ REV__ENSG00000181789|ENST00000314797|COPG1 19.256988751693697 0.5244284437930726 3 {I|L}{I|L}TPDPV 7 -1 43.426 0.0 0.0 3.9748 0.0 0.0 339.08677177106125 0.0 339.08677177106125 0.0 28.988868486384604 0.0 0.0 0 0.7887254899964358 0.0 0.8494850021680094 0.0 {I|L}{I|L}TPDPV 3.9748 - 1575 + 1 1.197 89104.6 1.0 12758 5766 18513 HBL1_DMSO_200M_050219_1,18526 HBL1_DMSO_200M_050219_1,18526,IIVDEAICSM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18527 88.691 273.0 505240.0 25 0 44423.0 + 22099 LPPPVFQM 8 133 464.7509811866896 927.4874094401792 2 464.7518798708916 MULTI CID FTMS 0 0 0 18513 301862.5625 0.6038731116544248 -2 0.2108993530273437 14 Unmodified _LPPPVFQM_ ENSG00000173726|ENST00000366607|TOMM20;ENST00000534518.1_1_11:77024925-77025045:+|nuORF 38.99230528602208 0.2511498934509823 3 [{I|L}P]PVP{M(Oxidation (M))|F}VC(Carbamidomethyl (C)) 8 4 + 53.141 0.0 0.0 5.7295 5.7295 76.678 0.0 0.0 0.0 8.100933824480222 9.262137858390815 8.100933824480222 1.0914446942506757 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [{I|L}P]PVP{M(Oxidation (M))|F}VC(Carbamidomethyl (C));[{I|L}P]PPV{M(Oxidation (M))|F}VC(Carbamidomethyl (C));[{I|L}P]PV{M(Oxidation (M))|F}PVC(Carbamidomethyl (C));[{I|L}P]PVM{I|L}VC(Carbamidomethyl (C));[VP]PP{I|L}{M(Oxidation (M))|F}VC(Carbamidomethyl (C));[{I|L}P]Q[KS]PVC(Carbamidomethyl (C));[{I|L}P]Q[QA]{I|L}VC(Carbamidomethyl (C));[{I|L}P]Q{I|L}[QA]VC(Carbamidomethyl (C));[{I|L}P]{[ET]|[MV]}P{I|L}VC(Carbamidomethyl (C));[{I|L}P]{[ET]|[MV]}{I|L}PVC(Carbamidomethyl (C)) 5.7295;5.6119;5.0804;5.0804;4.8561;4.8089;4.8089;4.7044;4.619;4.619 -;-;-;-;-;-;-;-;-;- 1229 1 1.197 108267.5 1.0 12759 5766 18513 HBL1_DMSO_200M_050219_1,18527 HBL1_DMSO_200M_050219_1,18527,LPPPVFQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18528 88.693 116.0 544370.0 25 0 70750.0 -1 TLCLSSRSV 9 103 511.76786363799 1021.52117434278 2 511.7680541872978 MULTI CID FTMS 0 0 0 18513 309883.21875 0.1468758835129172 3 -0.2392730712890625 15 Carbamidomethyl (C) _TLC(Carbamidomethyl (C))LSSRSV_ ENST00000473996.1_1_3:48454981-48455344:-|nuORF 15.847184025352805 0.4077185912009129 3 [WK]{M(Oxidation (M))|F}{[VA]|[{I|L}G]}WSV 8 -1 [WK]{M(Oxidation (M))|F}{[VA]|[{I|L}G]}W + + 21.643 2.5089 0.30694 2.1187 2.1187 48.941 0.0 0.0 0.0 0.0 4.131557819962577 0.0 0.0 0 0.3807196863200844 0.0 0.2887254899964357 0.0 [WK]{M(Oxidation (M))|F}{[VA]|[{I|L}G]}WSV 2.1187 - 163 + 1 1.197 52814.6 1.0 12760 5766 18513 HBL1_DMSO_200M_050219_1,18528 HBL1_DMSO_200M_050219_1,18528,TLCLSSRSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18529 88.701 445.0 647510.0 25 0 72676.0 + 2851 AVASSTIGIV 10 167 459.2683719921142 916.5221910510284 2 459.2687255740166 MULTI CID FTMS 0 0 0 18513 266218.84375 0.1027148815303202 -2 0.2108993530273437 16 Unmodified _AVASSTIGIV_ ENSG00000158158|ENST00000377075|CNNM4 50.855029805455786 0.0751325592344988 3 {[TV]|[{I|L}S]}Q{[MG]|[TS]}{I|L}{I|L}R 8 5 + 35.601 0.0 0.0 3.8843 3.8843 74.416 0.0 0.0 0.0 12.540462739150293 9.191337174839768 9.191337174839768 3.227277393423975 0 0.7742275032520141 1.5228787452803376 1.278659694992122 0.0 {[TV]|[{I|L}S]}Q{[MG]|[TS]}{I|L}{I|L}R;{[TV]|[{I|L}S]}Q{I|L}{[MG]|[TS]}{I|L}R;{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))R]{I|L}{I|L}R;{[TV]|[{I|L}S]}[AG]{[MG]|[TS]}{I|L}{I|L}R;{[TV]|[{I|L}S]}[AG]{I|L}{[MG]|[TS]}{I|L}R;{[VA]|[{I|L}G]}AS{[MG]|[TS]}{I|L}{I|L}R;[AG]S{I|L}{[MG]|[TS]}{I|L}{I|L}R;[{I|L}T]N{[MG]|[TS]}{I|L}{I|L}R;[AG]{I|L}S{[MG]|[TS]}{I|L}{I|L}R;[VG][TA]{[MG]|[TS]}{I|L}{I|L}R 3.8843;3.5322;2.8858;2.8738;2.5216;2.5161;2.3968;2.2541;2.1721;2.1683 -;-;-;-;-;-;-;-;-;- 1522 1 1.197 220340.0 1.0 12761 5766 18513 HBL1_DMSO_200M_050219_1,18529 HBL1_DMSO_200M_050219_1,18529,AVASSTIGIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18530 88.704 159.0 713710.0 25 0 81826.0 + 21359 LPFMATENI 9 154 518.2618671397895 1034.509181346379 2 518.2627441287041 MULTI CID FTMS 0 0 0 18513 252880.375 0.4668550893450033 -2 0.2108993530273437 17 Unmodified _LPFMATENI_ ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL 67.03532852164291 0.0222449892513529 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MA{I|L}TEAR 9 4 + 47.589 0.0 0.0 4.6001 4.6001 75.997 0.0 0.0 0.0 9.770760251333066 5.004311474114331 5.004311474114331 3.0102999566398125 0 0.3737125054200235 0.6777807052660807 0.7742275032520141 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MA{I|L}TEAR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}ATEAR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}MATEAR;{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}TEAR;[KG][CS]A{I|L}TEAR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AM{I|L}TEAR;[{I|L}P]{M(Oxidation (M))|F}MATEAR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MA{I|L}Y{M(Oxidation (M))|F}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATEAR;[KG][CS]{I|L}ATEAR 4.6001;4.3091;3.8479;3.6556;3.6249;3.5569;3.488;3.3768;3.3647;3.3339 -;-;-;-;-;-;-;-;-;- 2513 1 1.197 90326.1 1.0 12762 5766 18513 HBL1_DMSO_200M_050219_1,18530 HBL1_DMSO_200M_050219_1,18530,LPFMATENI True True LPFMATENI 88.704156 518.262744128704 3605724.5 18513.0 nc|ENSG00000239900|P30566-2|ADSL;;ENSG00000239900|ENST00000623063|ADSL 3.777712980906169 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18531 88.718 783.0 353580.0 25 0 22453.0 + -1 GLGAVILV 8 151 740.6951618399588 2219.0636561200763 3 741.0306274294853 MULTI CID FTMS 0 0 0 18513 210467.671875 0.6824784440587236 -1 0.1203155517578125 18 ENSG00000072832|ENST00000324989|CRMP1;ENST00000511535.1_1_4:5823489-5889136:-|nuORF;nc|ENSG00000072832|Q14194|CRMP1;ENST00000506216.5_1_4:5749932-5890196:-|nuORF 3 {I|L}{I|L}GNSAAD{I|L}{I|L}{I|L}N 12 -1 45.901 0.0 0.0 2.0685 0.0 0.0 0.0 1021.3902912121262 1021.3902912121262 11.798155750753764 0.0 0.0 0.0 0 1.0 1.154901959985743 0.0 0.5994850021680094 {I|L}{I|L}GNSAAD{I|L}{I|L}{I|L}N 2.0685 - 4276 1 1.197 203632.7 1.0 12763 5766 18513 HBL1_DMSO_200M_050219_1,18531 HBL1_DMSO_200M_050219_1,18531, False False GLGAVILV 88.717706 740.6966 1164065.625 18513.0 ENSG00000072832|ENST00000324989|CRMP1;;ENST00000511535.1_1_4:5823489-5889136:-|nuORF;;nc|ENSG00000072832|Q14194|CRMP1;;ENST00000506216.5_1_4:5749932-5890196:-|nuORF 2.574196497599284 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18532 88.724 322.0 311140.0 25 0 60905.0 + 9643 FLNLTFFGGFI 11 77 425.8957789026927 0 425.8957397341728 PEAK CID FTMS 0 0 0 18513 191625.265625 1.0 0 0.0 19 Unmodified _FLNLTFFGGFI_ REV__ENSG00000185313|ENST00000449082|SCN10A 13.90604991867851 0.4141907700618076 3 KV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5 -1 23.672 0.0 0.0 2.7857 0.0 0.0 62.37639519032968 116.05101953677968 178.42741472710935 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 KV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.7857 - 105 + 1 1.197 93250.5 1.0 12764 5766 18513 HBL1_DMSO_200M_050219_1,18532 HBL1_DMSO_200M_050219_1,18532,FLNLTFFGGFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18533 88.739 800.0 563260.0 25 0 49191.0 -1 0 153 943.478989660451 1884.943426387702 2 943.9803344607352 MULTI CID FTMS 0 0 0 18513 186789.453125 0.5008494459224501 -6 0.6298751831054688 20 3 [NP]N{I|L}{I|L}T 6 -1 37.515 0.0 0.0 1.9902 0.0 0.0 0.0 1229.563439002137 1229.563439002137 -1.5519807755951265 0.0 -1.5519807755951265 0.0 0 0.4247425010840047 0.6989700043360187 0.4247425010840047 0.6139829889124311 [NP]N{I|L}{I|L}T 1.9902 - 7817 1 1.197 286698.7 0.9900000095367432 12765 5766 18513 HBL1_DMSO_200M_050219_1,18533 HBL1_DMSO_200M_050219_1,18533, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18535 88.743 35.0 2102000.0 25 0 356470.0 + 11487 GIIPRVIQL 9 78 504.83188664626135 1007.6492203593228 2 504.8320495486259 MULTI CID FTMS 0 0 0 18534 1915037.75 0.0356031472561762 5 -0.4575042724609375 1 Unmodified _GIIPRVIQL_ ENSG00000226650|ENST00000435029|KIF4B 74.42276476219924 0.019389277360085 3 {[VA]|[{I|L}G]}{I|L}PRG{I|L}{I|L}G{I|L} 10 3 + 46.234 0.0 0.0 4.5883 4.5883 75.523 0.0 0.0 0.0 22.00700270390772 33.046218740408904 22.00700270390772 2.9363689693884254 0 1.7359856381998782 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}{I|L}PRG{I|L}{I|L}G{I|L};{[VA]|[{I|L}G]}{I|L}PR[{I|L}V]Q{I|L};[RP][{I|L}V]AG{I|L}{I|L}G{I|L};[RP][{I|L}V]Q{I|L}{I|L}G{I|L};[RP][{I|L}V]{I|L}{[VA]|[{I|L}G]}Q{I|L};[RP][{I|L}V]A[{I|L}V]Q{I|L};[RP][{I|L}V]{I|L}Q{I|L}G{I|L} 4.5883;4.2969;1.2459;1.1952;1.0785;0.95451;0.72166 -;+;-;-;-;-;- + 121 1 1.21 58656.9 1.0 12766 5767 18534 HBL1_DMSO_200M_050219_1,18535 HBL1_DMSO_200M_050219_1,18535,GIIPRVIQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18536 88.745 62.0 1587800.0 25 0 704170.0 26860 PCEDGGGG 8 60 346.1223262006547 690.2300994681094 2 346.1224548220634 MULTI CID FTMS 0 0 0 18534 1116031.5 0.9624086961002204 1 -0.0747756958007812 2 Unmodified _PCEDGGGG_ ENSG00000229544|ENST00000451024|NKX1-2 0.0 0.8243325171867699 3 V 1 8 6.9897 0.0 0.0 1.0127 0.0 0.0 59.04721105885114 529.0918034239039 588.1390144827551 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0127 - 1 + 1 1.21 83942.0 1.0 12767 5767 18534 HBL1_DMSO_200M_050219_1,18536 HBL1_DMSO_200M_050219_1,18536,PCEDGGGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18537 88.746 29.0 1818900.0 25 0 244430.0 + 26588 NVPEGLLATV 10 79 506.787590934558 1011.560628935916 2 506.7875549197197 MULTI CID FTMS 0 0 0 18534 2249033.0 1.0 0 0.0 3 Unmodified _NVPEGLLATV_ ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000075673|ENST00000381946|ATP12A;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENST00000485672.2_1_19:42488766-42489464:-|nuORF;nc|ENSG00000075673|P54707-2|ATP12A;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-2|ATP1A1;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1 22.736283301280096 0.4578556481593033 3 [PA]D{I|L}{I|L}A{[TV]|[{I|L}S]}NV 10 6 + 39.838 0.0 0.0 3.9383 3.9383 76.496 0.0 0.0 0.0 10.0 7.442190502882156 7.442190502882156 4.771212547196626 0 0.3182503180159344 1.0969100130080565 0.0 0.0 [PA]D{I|L}{I|L}A{[TV]|[{I|L}S]}NV;[PA]D{I|L}A{I|L}{[TV]|[{I|L}S]}NV;[EP]G{I|L}{I|L}A{[TV]|[{I|L}S]}NV;[EP]G{I|L}A{I|L}{[TV]|[{I|L}S]}NV;{[TV]|[{I|L}S]}AP{I|L}A{NN|[MP]|[D{I|L}]|[EV]}NV;{[TV]|[{I|L}S]}A{I|L}PA{NN|[MP]|[D{I|L}]|[EV]}NV;[PA]{[TV]|[{I|L}S]}{I|L}A{NN|[MP]|[D{I|L}]|[EV]}NV;[KC][W{I|L}]{I|L}P[PG]V;{[QN]|[E{I|L}]|[KN]}[PG]{I|L}A{[TV]|[{I|L}S]}NV;[TA]VP{I|L}A{NN|[MP]|[D{I|L}]|[EV]}NV 3.9383;3.4666;2.9497;2.478;1.9951;1.6017;1.3154;1.0966;0.95934;0.93951 -;-;-;-;-;-;-;-;-;- 301 1 1.21 48558.5 1.0 12768 5767 18534 HBL1_DMSO_200M_050219_1,18537 HBL1_DMSO_200M_050219_1,18537,NVPEGLLATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18538 88.747 50.0 1219800.0 25 0 198440.0 18695 LAIWEASL 8 62 451.75254133747273 901.4905297417456 2 451.7527343630791 MULTI CID FTMS 0 0 0 18534 1554638.75 0.0666319307202918 36 -3.833206176757813 4 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 42.96799951952854 0.1846367511955703 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 3 52.44 0.0 0.0 5.817 0.0 0.0 0.0 199.10767974450792 199.10767974450792 32.98918221526151 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 5.817 - 240 1 1.21 55499.9 1.0 12769 5767 18534 HBL1_DMSO_200M_050219_1,18538 HBL1_DMSO_200M_050219_1,18538,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18539 88.749 58.0 1593200.0 25 0 139010.0 + 9187 FGGVLILIHR 10 95 562.8502122288387 1123.6858715244773 2 562.8506347537041 MULTI CID FTMS 0 0 0 18534 1036327.125 0.1154701460715383 -4 0.4086227416992187 5 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 30.63653989081413 0.2803493085145199 3 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 106.69 0.0 0.0 9.4949 9.4949 93.323 0.0 0.0 0.0 91.98895692202362 14.09256854528806 14.09256854528806 8.26606256887672 0 1.0356668758921828 2.0 0.0 0.7742275032520141 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}VN{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;{I|L}VGG{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}[RH]{I|L};{I|L}VN{M(Oxidation (M))|F}{I|L}{I|L}[RH]{I|L};{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}[RH]{I|L};{I|L}VGG{M(Oxidation (M))|F}{I|L}{I|L}[RH]{I|L} 9.4949;8.7593;8.6754;7.9398;7.4016;6.666;6.5821;5.8465 -;-;-;-;-;-;-;- 548 + 1 1.21 77551.5 1.0 12770 5767 18534 HBL1_DMSO_200M_050219_1,18539 HBL1_DMSO_200M_050219_1,18539,FGGVLILIHR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18540 88.75 41.0 1621300.0 25 0 308690.0 + 8889 FAFESDLHSL 10 81 583.2801529681332 1164.5457530030662 2 583.2801391482353 MULTI CID FTMS 0 0 0 18534 994219.5 0.5985434944664259 -1 0.0776748657226562 6 Unmodified _FAFESDLHSL_ ENSG00000117399|ENST00000310955|CDC20;ENST00000488829.1_1_9:89626569-89628063:+|nuORF 96.28474662873226 0.0088832290995439 3 [H{I|L}]SDS{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AE 10 9 + 70.324 0.0 0.0 6.0387 6.0387 84.111 0.0 0.0 0.0 1.201398537265305 45.002642802502166 1.201398537265305 5.568109453757643 0 0.805462187404089 0.8860566476931632 0.8494850021680094 0.0 [H{I|L}]SDS{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AE;[H{I|L}]DSS{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AE;[H{I|L}]SDTV{M(Oxidation (M))|F}{M(Oxidation (M))|F}AE;[HS]{I|L}DS{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AE;[H{I|L}]SDT{M(Oxidation (M))|F}V{M(Oxidation (M))|F}AE;[H{I|L}]S{I|L}[YG]E{M(Oxidation (M))|F}AE;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}SS{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AE;[H{I|L}]DSTV{M(Oxidation (M))|F}{M(Oxidation (M))|F}AE;[H{I|L}]DST{M(Oxidation (M))|F}V{M(Oxidation (M))|F}AE;[HS]{I|L}DTV{M(Oxidation (M))|F}{M(Oxidation (M))|F}AE 6.0387;5.5606;5.3705;5.2281;5.18;5.1653;4.9022;4.8924;4.7019;4.5599 -;-;-;-;-;-;-;-;-;- 1102 1 1.21 53646.0 1.0 12771 5767 18534 HBL1_DMSO_200M_050219_1,18540 HBL1_DMSO_200M_050219_1,18540,FAFESDLHSL True True FAFESDLHSL 88.749696 583.280139148235 44477220.0 18534.0 ENST00000488829.1_1_9:89626569-89628063:+|nuORF;;ENSG00000117399|ENST00000310955|CDC20 7.314921061197917 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18541 88.751 71.0 1042000.0 25 0 169770.0 19876 LHPLDLAVL 9 78 495.802801249765 989.59104956633 2 495.8030883669853 MULTI CID FTMS 0 0 0 18534 931582.375 1.0 0 0.0 7 Unmodified _LHPLDLAVL_ ENST00000538185.1_1_11:61256765-61256957:+|nuORF 27.628801355627647 0.1796483985696185 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EA{I|L}VV{I|L} 9 4 + 64.391 0.0 0.0 6.5068 6.5068 80.259 0.0 0.0 0.0 6.064921830680703 16.478174818886373 6.064921830680703 1.7609125905568137 0 0.9247425010840048 0.0 0.6549471895720984 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EA{I|L}VV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}E{I|L}AVV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EAV{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}EAVV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}E{I|L}G{I|L}V{I|L};[H{I|L}]PEA{I|L}VV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}EG{I|L}V{I|L};[H{I|L}]EAVP{I|L}V{I|L};[H{I|L}]EAP{I|L}VV{I|L};[H{I|L}]PE{I|L}AVV{I|L} 6.5068;6.3288;6.2026;6.1509;6.0246;5.8939;5.8467;5.8449;5.8449;5.716 -;-;-;-;-;-;-;-;-;- 902 1 1.21 60273.2 1.0 12772 5767 18534 HBL1_DMSO_200M_050219_1,18541 HBL1_DMSO_200M_050219_1,18541,LHPLDLAVL False True LPHLEAVVI 88.751364 495.803088366985 22239592.0 18534.0 nc|ENSG00000137074|Q7Z2E3-12|APTX;;nc|ENSG00000137074|Q7Z2E3-9|APTX;;nc|ENSG00000137074|Q7Z2E3|APTX;;nc|ENSG00000137074|Q7Z2E3-13|APTX;;nc|ENSG00000137074|Q7Z2E3-11|APTX;;nc|ENSG00000137074|Q7Z2E3-8|APTX;;ENSG00000137074|ENST00000379817|APTX;;nc|ENSG00000137074|Q7Z2E3-5|APTX;;nc|ENSG00000137074|Q7Z2E3-10|APTX;;nc|ENSG00000137074|Q7Z2E3-3|APTX 4.734354416529338 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18542 88.753 48.0 1082700.0 25 0 128930.0 + 10195 FQDQQILTL 9 83 553.2978643459693 1104.5811757587385 2 553.2982665896416 MULTI CID FTMS 0 0 0 18534 908589.0625 0.7544440682511899 2 -0.1615982055664062 8 Unmodified _FQDQQILTL_ ENST00000524634.5_1_2:228190068-228197215:+|nuORF 22.736283301280096 0.2418982879461534 3 {I|L}ND{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 5 7 17.703 0.0 0.0 1.6027 0.0 0.0 485.332811424025 0.0 485.332811424025 0.0 0.5115252244738109 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}ND{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 1.6027 - 202 1 1.21 47721.6 1.0 12773 5767 18534 HBL1_DMSO_200M_050219_1,18542 HBL1_DMSO_200M_050219_1,18542,FQDQQILTL False True FQDQQILTL 88.752656 553.298266589642 14011273.0 18534.0 ENST00000524634.5_1_2:228190068-228197215:+|nuORF 1.2231414516766863 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18543 88.754 51.0 660280.0 25 0 69137.0 + 40314 VGYDKDFLTI 10 63 585.80501125263 1169.59546957206 2 585.8058349490166 MULTI CID FTMS 0 0 0 18534 855117.875 0.6499056246708169 2 -0.1615982055664062 9 Unmodified _VGYDKDFLTI_ ENSG00000123066|ENST00000281928|MED13L 29.84058131909904 0.2982332456971691 3 [VG]{[YD]|[{M(Oxidation (M))|F}M]}K{[{M(Oxidation (M))|F}D]|MM}{I|L}T{I|L} 10 0 [VG]{[YD]|[{M(Oxidation (M))|F}M]}K{[{M(Oxidation (M))|F}D]|MM}{I|L} + + 27.206 11.092 1.1833 2.3261 2.3261 49.17 0.0 0.0 0.0 0.0 8.843800424100365 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 + + [VG]{[YD]|[{M(Oxidation (M))|F}M]}K{[{M(Oxidation (M))|F}D]|MM}{I|L}T{I|L} 2.3261 + + 69 + 1 1.21 33475.3 1.0 12774 5767 18534 HBL1_DMSO_200M_050219_1,18543 HBL1_DMSO_200M_050219_1,18543,VGYDKDFLTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18544 88.755 37.0 1399800.0 25 0 236210.0 + -1 VAAYSFCSL 9 89 509.2405049319326 1016.4664569306652 2 509.2405883669853 MULTI CID FTMS 0 0 0 18534 651929.0 0.2862335639257257 4 -0.3493270874023437 10 Carbamidomethyl (C) _VAAYSFC(Carbamidomethyl (C))SL_ REV__ENSG00000189181|ENST00000342623|OR14I1 7.289230182591677 0.6602208344931196 3 S{I|L} 2 -1 15.573 0.0 0.0 1.5321 0.0 0.0 798.3392424304684 0.0 798.3392424304684 0.0 3.938841556812589 0.0 0.0 0 0.0 0.0 0.0 0.0 S{I|L} 1.5321 + + 72 + 1 1.21 44110.5 1.0 12775 5767 18534 HBL1_DMSO_200M_050219_1,18544 HBL1_DMSO_200M_050219_1,18544,VAAYSFCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18545 88.757 59.0 894500.0 25 0 89657.0 + 8899 FAFRYVTTI 9 85 559.305377078076 1116.596201222952 2 559.3051635622978 MULTI CID FTMS 0 0 0 18534 514065.8125 0.0639950708318555 -4 0.4086227416992187 11 Unmodified _FAFRYVTTI_ ENSG00000187325|ENST00000341864|TAF9B;ENSG00000273841|ENST00000217893|TAF9;ENST00000480681.1_1_X:77393446-77395117:-|nuORF;ENST00000587506.1_1_19:30528395-30528668:+|nuORF 60.07390631473393 0.0260411565414776 3 [PS]{I|L}R{[QC]|[C(Carbamidomethyl (C))A]}VTT{I|L} 10 5 + 45.265 0.0 0.0 4.0539 4.0539 82.594 0.0 0.0 0.0 0.0436480540244943 28.93465250258449 0.0436480540244943 10.791812460476253 0 0.8807196863200843 0.0 0.9247425010840048 0.0 [PS]{I|L}R{[QC]|[C(Carbamidomethyl (C))A]}VTT{I|L};[PS]{I|L}[YV]PMPT{I|L};{M(Oxidation (M))|F}[DV]VP[WK]N{I|L};[PS]{I|L}[YV]PM{I|L}[TP] 4.0539;3.0874;1.2355;0.40128 -;-;-;- 390 1 1.21 47378.2 1.0 12776 5767 18534 HBL1_DMSO_200M_050219_1,18545 HBL1_DMSO_200M_050219_1,18545,FAFRYVTTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18546 88.758 73.0 1017500.0 25 0 93345.0 + + -1 LPFFPNQHI 9 102 556.7989914132557 1111.5834298933114 2 556.8000976443291 MULTI CID FTMS 0 0 0 18534 440502.71875 0.969374661613241 -1 0.0776748657226562 12 Oxidation (M) _IMLFLIM(Oxidation (M))CL_ ENSG00000162437|ENST00000294428|RAVER2;nc|ENSG00000162437|Q9HCJ3-2|RAVER2 36.46614268402704 0.0948557732959553 3 {I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[CP]|[EA]}Y{I|L} 9 -1 + 68.738 0.0 0.0 6.1838 6.1838 92.828 0.0 0.0 0.0 42.796313546227225 12.474294205820478 12.474294205820478 68.73843851687425 0 0.7302046884880937 1.5228787452803376 0.3054621874040891 0.0 {I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[CP]|[EA]}Y{I|L} 6.1838 - 337 + 1 1.21 63457.6 1.0 12777 5767 18534 HBL1_DMSO_200M_050219_1,18546 HBL1_DMSO_200M_050219_1,18546,IMLFLIMCL False False LPFFPNQHI 88.758368 556.800097644329 10173157.0 18534.0 ENSG00000162437|ENST00000294428|RAVER2;;nc|ENSG00000162437|Q9HCJ3-2|RAVER2 5.057943662007649 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18547 88.76 99.0 586640.0 25 0 57765.0 + 3717 DAFQLAVNV 9 106 488.7590642674788 975.5035756017576 2 488.7588989138603 MULTI CID FTMS 0 0 0 18534 379917.4375 0.9529414272991455 1 -0.0747756958007812 13 Unmodified _DAFQLAVNV_ ENSG00000048028|ENST00000696973|USP28;ENST00000540438.5_1_11:113691037-113702685:-|nuORF;nc|ENSG00000048028|Q96RU2-2|USP28;nc|ENSG00000048028|Q96RU2-3|USP28;nc|ENSG00000048028|Q96RU2|USP28 34.40172386719151 0.1061884637610825 3 {[DA]|[EG]}{M(Oxidation (M))|F}Q{I|L}A 6 3 32.44 0.0 0.0 3.3255 0.0 0.0 0.0 327.1676130375577 327.1676130375577 15.189549981487076 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3054621874040891 0.0 + {[DA]|[EG]}{M(Oxidation (M))|F}Q{I|L}A 3.3255 + + 353 1 1.21 54075.6 1.0 12778 5767 18534 HBL1_DMSO_200M_050219_1,18547 HBL1_DMSO_200M_050219_1,18547,DAFQLAVNV True True DAFQLAVNV 88.760498 488.75889891386 5379633.5 18534.0 nc|ENSG00000048028|Q96RU2-2|USP28;;nc|ENSG00000048028|Q96RU2-3|USP28;;ENSG00000048028|ENST00000696973|USP28;;nc|ENSG00000048028|Q96RU2|USP28;;ENST00000540438.5_1_11:113691037-113702685:-|nuORF 5.194027264912923 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18548 88.771 614.0 613290.0 25 0 60658.0 + 23922 LVPEEMVTL 9 122 1030.5481333417265 1029.5408568751266 1 1030.549365222454 MULTI CID FTMS 0 0 0 18534 324360.625 0.7069850356375755 -1 0.0776748657226562 14 Unmodified _LVPEEMVTL_ ENST00000477624.1_1_3:48485261-48485342:+|nuORF 96.28474662873226 0.0124266067997264 3 [EP]EMV{I|L}VT{I|L} 9 4 + 90.856 0.0 0.0 8.825 8.825 88.532 0.0 0.0 0.0 21.12704280191288 38.19733629824562 21.12704280191288 3.803585881591843 0 0.9163865622122672 1.3979400086720375 1.309894379144197 0.0 [EP]EMV{I|L}VT{I|L};[EP]EMV{I|L}TV{I|L};[EP]EM{I|L}VVT{I|L};[EP]EMVT{I|L}V{I|L};[EP]EM{I|L}VTV{I|L};[EP]EMVV{I|L}T{I|L};[EP]EMV{I|L}T{I|L}V;[EP]E{I|L}MVVT{I|L};[EP]E{I|L}VMVT{I|L};[EP]EM{I|L}S{I|L}V{I|L} 8.825;8.4555;8.0648;7.9823;7.6954;7.5954;7.4817;7.3859;7.2646;7.2221 -;-;-;-;-;-;-;-;-;- 10215 1 1.21 236819.5 1.0 12779 5767 18534 HBL1_DMSO_200M_050219_1,18548 HBL1_DMSO_200M_050219_1,18548,LVPEEMVTL True True LVPEEMVTL 88.77126 1030.54936522245 6172495.5 18534.0 ENST00000477624.1_1_3:48485261-48485342:+|nuORF 5.549019495646159 1.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18549 88.777 309.0 330510.0 25 0 14644.0 -1 0 117 966.9643222406994 1931.9140915481987 2 967.4617797732352 MULTI CID FTMS 0 0 0 18534 333868.90625 0.1139659062912632 7 -0.639434814453125 15 3 {NN|[MP]|[D{I|L}]|[EV]}TVPV[Y{M(Oxidation (M))|F}]QDAD{I|L}NP[EP] 17 -1 + 71.783 0.0 0.0 3.7157 3.7157 76.549 0.0 0.0 0.0 5.418465843563169 7.695510786217255 5.418465843563169 5.418465843563169 0 0.0 1.154901959985743 0.9476212463643424 0.7302046884880937 {NN|[MP]|[D{I|L}]|[EV]}TVPV[Y{M(Oxidation (M))|F}]QDAD{I|L}NP[EP];[NP]{I|L}NW[PG]RQDAD{I|L}NP[EP];{NN|[MP]|[D{I|L}]|[EV]}TVPV[Y{M(Oxidation (M))|F}]QWD{I|L}NP[EP];{NN|[MP]|[D{I|L}]|[EV]}TVPV[Y{M(Oxidation (M))|F}]QDW{I|L}NP[EP];{[TV]|[{I|L}S]}EVPV[Y{M(Oxidation (M))|F}]QDAD{I|L}NP[EP];{NN|[MP]|[D{I|L}]|[EV]}TVPV[Y{M(Oxidation (M))|F}][AG]DAD{I|L}NP[EP];{NN|[MP]|[D{I|L}]|[EV]}TVPV[Y{M(Oxidation (M))|F}]QDAD{I|L}GGP[EP];[NP][WK]V[Y{M(Oxidation (M))|F}]QDAD{I|L}NP[EP];[NP]{I|L}NW[PG]RQDW{I|L}NP[EP];[NP]{I|L}NW[PG]RQWD{I|L}NP[EP] 3.7157;3.4352;3.3675;3.3675;3.3037;3.2499;3.2499;3.169;3.087;3.087 -;-;-;-;-;-;-;-;-;- 5607 1 1.21 72560.4 1.0 12780 5767 18534 HBL1_DMSO_200M_050219_1,18549 HBL1_DMSO_200M_050219_1,18549, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18550 88.781 205.0 364290.0 25 0 19072.0 + 1686 ALPELYFQKV 10 93 604.3402626910758 1206.6659724489516 2 604.3406249880791 MULTI CID FTMS 0 0 0 18534 311079.875 0.922537669110875 -1 0.0776748657226562 16 Unmodified _ALPELYFQKV_ ENSG00000065308|ENST00000182527|TRAM2 27.088373467376528 0.3600710273140457 3 [{I|L}A]PE{I|L}Y{M(Oxidation (M))|F}QKV 10 0 + 71.509 0.0 0.0 5.9261 5.9261 86.896 0.0 0.0 0.0 28.700078447901618 8.52619766068453 8.52619766068453 9.164539485499247 0 0.3252574989159953 2.0 0.0 0.9204841662593096 + + [{I|L}A]PE{I|L}Y{M(Oxidation (M))|F}QKV;[{I|L}A]PE{I|L}Y{M(Oxidation (M))|F}[AG]KV;[{I|L}A]V[YR]{[QC]|[C(Carbamidomethyl (C))A]}QKV;[{I|L}A]V[YR][{M(Oxidation (M))|F}T]QP{I|L};[TP][{I|L}V]{I|L}Y{M(Oxidation (M))|F}QKV;[{I|L}A]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Y{M(Oxidation (M))|F}]QP{I|L};[TP][{I|L}V]{I|L}Y{M(Oxidation (M))|F}[AG]KV 5.9261;5.1666;3.2972;2.8967;2.4452;2.4178;1.6857 +;-;-;-;-;-;- + 260 + 1 1.21 61032.5 1.0 12781 5767 18534 HBL1_DMSO_200M_050219_1,18550 HBL1_DMSO_200M_050219_1,18550,ALPELYFQKV False True ALPELYFQKV 88.780862 604.340624988079 2587057.0 18534.0 ENSG00000065308|ENST00000182527|TRAM2 7.597232977549235 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18551 88.793 673.0 368000.0 25 0 26612.0 + 16782 KGIDYDFPSL 10 213 577.7916845091363 1153.5688160850725 2 577.7909423708916 MULTI CID FTMS 0 0 0 18534 286786.5 0.2698239816646538 -10 1.0927505493164062 17 Unmodified _KGIDYDFPSL_ ENSG00000155438|ENST00000285814|NIFK;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 80.89551112106177 0.0163339094631175 3 [PS]TKYD{M(Oxidation (M))|F}PS{I|L} 10 4 + 86.96 0.0 0.0 7.5384 7.5384 90.635 0.0 0.0 0.0 8.010299956639813 20.581269768153504 8.010299956639813 8.010299956639813 0 1.1989700043360187 1.2218487496163564 2.028659694992122 0.25 [PS]TKYD{M(Oxidation (M))|F}PS{I|L};[VG]EKYD{M(Oxidation (M))|F}PS{I|L};{NN|[MP]|[D{I|L}]|[EV]}GKYD{M(Oxidation (M))|F}PS{I|L};[PS]TYKD{M(Oxidation (M))|F}PS{I|L};[PS]TKY{M(Oxidation (M))|F}DPS{I|L};{[VA]|[{I|L}G]}KDYD{M(Oxidation (M))|F}PS{I|L};[PS]TKYDETT{I|L};[{I|L}T]T{M(Oxidation (M))|F}ND{M(Oxidation (M))|F}PS{I|L};[PS]TK{M(Oxidation (M))|F}YDPS{I|L};[PS]TKYDT{[ET]|[MV]}{I|L} 7.5384;6.844;6.7484;6.2568;6.181;6.1038;6.0565;5.9539;5.899;5.8931 -;-;-;-;-;-;-;-;-;- 6003 1 1.21 195676.6 1.0 12782 5767 18534 HBL1_DMSO_200M_050219_1,18551 HBL1_DMSO_200M_050219_1,18551,KGIDYDFPSL True True KGIDYDFPSL 88.792579 577.790942370892 19141248.0 18534.0 ENSG00000155438|ENST00000285814|NIFK;;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 5.64730183283488 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18552 88.796 150.0 673130.0 25 0 63344.0 + 31400 RPELSGTMH 9 125 514.2534499799457 1026.4923470266913 2 514.2542602419853 MULTI CID FTMS 0 0 0 18534 265095.75 1.0 0 0.0 18 Unmodified _RPELSGTMH_ REV__ENST00000262585.6_3_8:142204575-142204977:+|nuORF 21.53697664764585 0.2571576504437394 3 [EP]R{I|L}SM{I|L} 7 -1 47.827 0.0 0.0 4.6593 0.0 0.0 0.0 197.03040789999127 197.03040789999127 16.233514072591234 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.3054621874040891 0.5994850021680094 [EP]R{I|L}SM{I|L} 4.6593 - 1201 1 1.21 84740.4 1.0 12783 5767 18534 HBL1_DMSO_200M_050219_1,18552 HBL1_DMSO_200M_050219_1,18552,RPELSGTMH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18553 88.809 800.0 543450.0 25 0 116950.0 + 2073 APNNNPAP 8 216 397.6927891020698 793.3710252709396 2 397.6929199099541 MULTI CID FTMS 0 0 0 18534 261487.75 0.1364924062428757 -3 0.28857421875 19 Unmodified _APNNNPAP_ REV__ENSG00000160460|ENST00000598249|SPTBN4;REV__nc|ENSG00000160460|Q9H254-2|SPTBN4;REV__nc|ENSG00000160460|Q9H254-4|SPTBN4 5.760428011301431 0.7893668129297577 3 [DV]{I|L}{I|L}[MT]C 7 -1 + 46.124 0.0 0.0 5.8136 5.8136 88.658 0.0 0.0 0.0 28.58787781006169 7.122213499699868 7.122213499699868 12.028937514676484 0 0.6694451763165201 2.0 0.8494850021680094 0.0 [DV]{I|L}{I|L}[MT]C;[DV]{I|L}[MT]C{I|L};[DV]{I|L}[MT]{I|L}C;[R{M(Oxidation (M))|F}]QD[QT] 5.8136;4.2975;3.7606;0.35965 -;-;-;- 152 + 1 1.21 335083.2 0.8799999952316284 12784 5767 18534 HBL1_DMSO_200M_050219_1,18553 HBL1_DMSO_200M_050219_1,18553,APNNNPAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18554 88.813 141.0 668560.0 25 0 117170.0 + 38845 TVIDYFHQL 9 115 568.2937342341386 1134.572915535077 2 568.2938110232353 MULTI CID FTMS 0 0 0 18534 253369.015625 0.5984151587719712 -1 0.0776748657226562 20 Unmodified _TVIDYFHQL_ ENSG00000165490|ENST00000533655|DDIAS 68.08070601005525 0.0218408846571049 3 {[TV]|[{I|L}S]}{I|L}DY{M(Oxidation (M))|F}HQ{I|L} 9 0 + 75.9 0.0 0.0 6.6897 6.6897 92.274 0.0 0.0 0.0 50.82773124424534 20.00939592019911 20.00939592019911 15.783409326844264 0 0.4247425010840047 2.0 0.3807196863200844 1.055462187404089 + + {[TV]|[{I|L}S]}{I|L}DY{M(Oxidation (M))|F}HQ{I|L};{[TV]|[{I|L}S]}{I|L}DY{M(Oxidation (M))|F}HGA{I|L};{[TV]|[{I|L}S]}{I|L}DY{M(Oxidation (M))|F}HAAV;{[TV]|[{I|L}S]}{I|L}{[CA]|SS}[HN]HQ{I|L};{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V]Q[NS]D{I|L};{[TV]|[{I|L}S]}{I|L}{[CA]|SS}[HN]HGA{I|L};{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V]Q[NS]EV;{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V]Q[DN]S{I|L};{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V]Q[DN]TV;{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))S]D{I|L}E{I|L}[KA] 6.6897;5.2986;4.9075;4.4908;3.7305;3.7257;3.6902;3.5852;3.5449;3.5054 +;-;-;-;-;-;-;-;-;- + 765 + 1 1.21 75778.8 1.0 12785 5767 18534 HBL1_DMSO_200M_050219_1,18554 HBL1_DMSO_200M_050219_1,18554,TVIDYFHQL True True TVIDYFHQL 88.813416 568.293811023235 3483290.0 18534.0 ENSG00000165490|ENST00000533655|DDIAS 7.122557322184245 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18556 88.818 6.7 6822200.0 25 0 723270.0 + 130 AALEEADKMFL 11 75 619.3099869338249 1236.6054209344495 2 619.3106567263603 MULTI CID FTMS 0 0 0 18555 7197443.0 1.0 0 0.0 1 Unmodified _AALEEADKMFL_ ENSG00000255302|ENST00000530028|EID1;nc|ENSG00000255302|Q9Y6B2-2|EID1 67.08073823543168 0.0408645806987127 3 AA{I|L}EEADKM{M(Oxidation (M))|F}{I|L} 11 0 + 58.598 0.0 0.0 4.7386 4.7386 73.28 0.0 0.0 0.0 1.0840452609396678 3.5899978589036508 1.0840452609396678 1.0840452609396678 0 2.571333751784365 1.0969100130080565 0.4247425010840047 0.0 + + AA{I|L}EEADKM{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}AAEWKM{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}AAEADKM{M(Oxidation (M))|F}{I|L};AATAMEE{I|L}AA{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}EAAWKM{M(Oxidation (M))|F}{I|L};AA{I|L}E[CS]E{I|L}AA{M(Oxidation (M))|F}{I|L};AATAME[RP]M{M(Oxidation (M))|F}{I|L};AA{I|L}[CS]EE{I|L}AA{M(Oxidation (M))|F}{I|L};[{I|L}A]AEEADKM{M(Oxidation (M))|F}{I|L};AA{I|L}E[CS][RP]M{M(Oxidation (M))|F}{I|L} 4.7386;4.651;4.1316;3.921;3.8608;3.8324;3.7504;3.7359;3.6722;3.6618 +;-;-;-;-;-;-;-;-;- + 1357 1 1.218 38385.4 1.0 12786 5768 18555 HBL1_DMSO_200M_050219_1,18556 HBL1_DMSO_200M_050219_1,18556,AALEEADKMFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18557 88.819 4.3 13845000.0 25 0 1014800.0 + 20852 LMELALRLD 9 68 537.3040469435826 1072.5935409539652 2 537.3019897341728 MULTI CID FTMS 0 0 0 18555 4178497.0 0.7250053006887252 1 -0.086822509765625 2 Unmodified _LMELALRLD_ REV__ENSG00000166387|ENST00000299492|PPFIBP2 19.361941925380144 0.3125782356748823 3 {I|L}M{I|L}EA{I|L}RD{I|L} 9 -1 + 75.398 0.0 0.0 7.0295 7.0295 86.307 0.0 0.0 0.0 4.771212547196626 6.320232147054057 4.771212547196626 4.771212547196626 0 0.3494850021680094 2.0 0.0 0.0 {I|L}M{I|L}EA{I|L}RD{I|L};M{I|L}{I|L}EA{I|L}RD{I|L};{I|L}M{I|L}EA{I|L}E[RV];M{I|L}{I|L}EA{I|L}E[RV];{I|L}MV[DV]{I|L}RD{I|L};M{I|L}V[DV]{I|L}RD{I|L};{I|L}MV[DV]{I|L}E[RV];M{I|L}V[DV]{I|L}E[RV];{I|L}[{M(Oxidation (M))|F}V]PT{I|L}RD{I|L};[{M(Oxidation (M))|F}V]{I|L}PT{I|L}RD{I|L} 7.0295;6.5847;6.4403;5.9955;5.3979;4.953;4.8086;4.3638;3.5332;3.2526 -;-;-;-;-;-;-;-;-;- 252 + 1 1.218 51480.3 1.0 12787 5768 18555 HBL1_DMSO_200M_050219_1,18557 HBL1_DMSO_200M_050219_1,18557,LMELALRLD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18558 88.82 15.0 3279500.0 25 0 899060.0 16420 IYWGAYLL 8 54 499.769056133804 997.523559334408 2 499.7690002322197 MULTI CID FTMS 0 0 0 18555 3678328.25 0.450026056483507 3 -0.2745513916015625 3 Unmodified _IYWGAYLL_ ENST00000298229.6_1_11:71949456-71949768:+|nuORF 24.20995872069341 0.5349487244130675 3 Y{I|L}{I|L} 3 5 35.445 0.0 0.0 3.5533 0.0 0.0 590.281579107716 0.0 590.281579107716 0.0 24.47621246364342 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + Y{I|L}{I|L} 3.5533 + + 48 1 1.218 42444.5 1.0 12788 5768 18555 HBL1_DMSO_200M_050219_1,18558 HBL1_DMSO_200M_050219_1,18558,IYWGAYLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18559 88.821 34.0 1116700.0 25 0 102160.0 + 23603 LTPLPPRQFA 10 63 570.3313062971336 1138.648059661067 2 570.3312866091728 MULTI CID FTMS 0 0 0 18555 1370061.625 0.8143008724217318 1 -0.086822509765625 4 Unmodified _LTPLPPRQFA_ REV__ENST00000280562.9_1_12:123476423-123479403:-|nuORF 10.073929032068715 0.6785112666868882 3 {I|L}P{I|L} 3 -1 13.188 0.0 0.0 1.1582 0.0 0.0 504.2427995065733 308.1622408502563 812.4050403568295 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}P{I|L} 1.1582 - 26 + 1 1.218 37875.3 1.0 12789 5768 18555 HBL1_DMSO_200M_050219_1,18559 HBL1_DMSO_200M_050219_1,18559,LTPLPPRQFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18560 88.823 47.0 986820.0 25 0 82915.0 + 4886 DGHFVPNITF 10 73 573.7826501391392 1145.5507473450782 2 573.7827636599541 MULTI CID FTMS 0 0 0 18555 1316260.5 0.9043708849520584 1 -0.086822509765625 5 Unmodified _DGHFVPNITF_ ENSG00000197713|ENST00000359429|RPE;ENSG00000235376|ENST00000441178|RPEL1;nc|ENSG00000197713|Q96AT9-4|RPE 20.41453444215458 0.5050059513928961 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R{I|L}[C(Carbamidomethyl (C))R]T{M(Oxidation (M))|F} 8 7 + 33.109 0.0 0.0 2.8902 2.8902 80.115 0.0 0.0 0.0 13.723637474483464 7.435464932947724 7.435464932947724 11.505149978319906 0 0.5 0.0 0.3494850021680094 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R{I|L}[C(Carbamidomethyl (C))R]T{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R{I|L}W[KC]{M(Oxidation (M))|F};[NP][MN]V[NP]{I|L}T{M(Oxidation (M))|F};[NP]{[QG]|[NA]}W[PS]{I|L}T{M(Oxidation (M))|F};[NP]{[QG]|[NA]}W{I|L}[PS]T{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R[YQ]RMV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R[PA]H[QP]{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]R[YQ][PS]T{M(Oxidation (M))|F};[NP]{[QG]|[NA]}W{I|L}[VG][{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R[PA]HAAMV 2.8902;1.8859;1.7762;1.0969;1.0969;0.73168;0.62093;0.35918;0.11983;0.095364 -;-;-;-;-;-;-;-;-;- 246 + 1 1.218 41872.3 1.0 12790 5768 18555 HBL1_DMSO_200M_050219_1,18560 HBL1_DMSO_200M_050219_1,18560,DGHFVPNITF False True DGHFVPNITF 88.822499 573.782763659954 33545350.0 18555.0 nc|ENSG00000197713|Q96AT9-4|RPE;;ENSG00000197713|ENST00000359429|RPE;;ENSG00000235376|ENST00000441178|RPEL1 10.679168701171877 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18561 88.824 80.0 631560.0 25 0 94704.0 + 9440 FLASESLIKQI 11 68 624.8635046543417 1247.7124563754833 2 624.8633911013603 MULTI CID FTMS 0 0 0 18555 714253.0 0.5338876622480501 1 -0.086822509765625 6 Unmodified _FLASESLIKQI_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 61.60191391372663 0.0626439052904852 3 K{I|L}{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}AE{I|L} 9 6 46.092 0.0 0.0 3.6942 0.0 0.0 259.1533375470719 0.0 259.1533375470719 0.0 16.721675119240516 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.805462187404089 K{I|L}{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}AE{I|L} 3.6942 - 262 1 1.218 46906.1 1.0 12791 5768 18555 HBL1_DMSO_200M_050219_1,18561 HBL1_DMSO_200M_050219_1,18561,FLASESLIKQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18562 88.826 71.0 644490.0 25 0 130830.0 + 33432 SIAGIFKEV 9 68 482.2788856750527 962.5432184169052 2 482.2793762087822 MULTI CID FTMS 0 0 0 18555 539069.9375 0.5988884921813669 2 -0.229278564453125 7 Unmodified _SIAGIFKEV_ ENSG00000080189|ENST00000372230|SLC35C2;ENST00000480329.5_1_20:44979343-44983832:-|nuORF;ENST00000493599.1_1_20:44979343-44980935:-|nuORF;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2 26.268140514670165 0.1969607489560049 3 {[TV]|[{I|L}S]}A 3 6 37.007 0.0 0.0 3.8447 0.0 0.0 0.0 688.3639620416624 688.3639620416624 16.372184226116673 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + {[TV]|[{I|L}S]}A 3.8447 + + 215 + 1 1.218 42509.7 1.0 12792 5768 18555 HBL1_DMSO_200M_050219_1,18562 HBL1_DMSO_200M_050219_1,18562,SIAGIFKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18563 88.829 140.0 773100.0 25 0 122000.0 + 12717 GVLSVLLALA 10 133 478.3132302034176 954.6119074736353 2 478.3133422732353 MULTI CID FTMS 0 0 0 18555 536240.6875 1.0 0 0.0 8 Unmodified _GVLSVLLALA_ REV__ENSG00000104723|ENST00000503731|TUSC3;REV__nc|ENSG00000104723|Q13454-2|TUSC3 37.97399986684836 0.1789611706409123 3 [VG]S{I|L}V{I|L}R 7 -1 49.332 0.0 0.0 5.1678 0.0 0.0 0.0 227.14252205787264 227.14252205787264 6.407854813243986 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.91944517631652 0.0 [VG]S{I|L}V{I|L}R 5.1678 - 1840 1 1.218 84696.1 1.0 12793 5768 18555 HBL1_DMSO_200M_050219_1,18563 HBL1_DMSO_200M_050219_1,18563,GVLSVLLALA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18564 88.831 93.0 555070.0 25 0 105070.0 + 16031 ITINDIVHV 9 83 512.2949237912161 1022.5752946492322 2 512.2954589724541 MULTI CID FTMS 0 0 0 18555 514089.125 1.0 0 0.0 9 Unmodified _ITINDIVHV_ ENSG00000132153|ENST00000445061|DHX30;ENST00000474183.1_1_3:47889269-47889497:+|nuORF;nc|ENSG00000132153|Q7L2E3-2|DHX30;nc|ENSG00000132153|Q7L2E3-3|DHX30 43.85829265575387 0.0542763391141878 3 {I|L}T{I|L}ND{I|L}VHV 9 0 + 89.391 0.0 0.0 8.7417 8.7417 94.163 0.0 0.0 0.0 48.244171855527966 12.587418566968154 12.587418566968154 9.208187539523747 0 0.3807196863200844 2.0 0.0 0.0 + + {I|L}T{I|L}ND{I|L}VHV;{I|L}T{I|L}GGD{I|L}VHV;{I|L}[SG][{I|L}A]D{I|L}VHV 8.7417;7.8412;3.385 +;-;- + 166 + 1 1.218 44653.1 1.0 12794 5768 18555 HBL1_DMSO_200M_050219_1,18564 HBL1_DMSO_200M_050219_1,18564,ITINDIVHV True True ITINDIVHV 88.830872 512.295458972454 4850626.0 18555.0 nc|ENSG00000132153|Q7L2E3-3|DHX30;;nc|ENSG00000132153|Q7L2E3-2|DHX30;;ENST00000474183.1_1_3:47889269-47889497:+|nuORF;;ENSG00000132153|ENST00000445061|DHX30 8.034250259399414 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18565 88.833 107.0 398110.0 25 0 48182.0 + 16097 ITSDQPRTL 9 84 515.7785877113145 1029.5426224894288 2 515.7779418826103 MULTI CID FTMS 0 0 0 18555 469858.40625 1.0 0 0.0 10 Unmodified _ITSDQPRTL_ REV__ENSG00000178386|ENST00000434772|ZNF223 15.847184025352805 0.4077185912009129 3 [EP]EMV 5 -1 25.406 0.0 0.0 2.4677 0.0 0.0 0.0 441.2720896127289 441.2720896127289 5.050756661862504 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 [EP]EMV 2.4677 - 67 1 1.218 40436.0 1.0 12795 5768 18555 HBL1_DMSO_200M_050219_1,18565 HBL1_DMSO_200M_050219_1,18565,ITSDQPRTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18566 88.836 114.0 340960.0 25 0 65157.0 + 38314 TQINVGNLEL 10 67 550.8002401698453 1099.5859274064906 2 550.8007690310478 MULTI CID FTMS 0 0 0 18555 415882.03125 1.0 0 0.0 11 Unmodified _TQINVGNLEL_ ENSG00000100201|ENST00000403230|DDX17;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 15.248480904072842 0.5916873121453583 3 {[QV]|[N{I|L}]|[RA]|[KV]}QTV[WP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 7 + 23.689 0.0 0.0 2.1543 2.1543 71.276 0.0 0.0 0.0 3.3231982026179843 3.925449767853312 3.3231982026179843 3.3231982026179843 0 0.0 0.958607314841775 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}QTV[WP]{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]NTV[WP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}[AG]TV[WP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}[HN]PY{I|L}[KS];{[QN]|[E{I|L}]|[KN]}[DV]V[WP]{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]GGTV[WP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}{[YC]|[HE]}PY{I|L}[KS];[QT]{[QV]|[N{I|L}]|[RA]|[KV]}V[WP]{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}][HD]PY{I|L}[KS];[Q{I|L}][WY]Y{I|L}[KS] 2.1543;1.8521;1.3169;1.2581;1.2419;1.0147;1.0128;0.88173;0.71053;0.55529 -;-;-;-;-;-;-;-;-;- 215 1 1.218 34798.1 1.0 12796 5768 18555 HBL1_DMSO_200M_050219_1,18566 HBL1_DMSO_200M_050219_1,18566,TQINVGNLEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18567 88.844 487.0 246930.0 25 0 38140.0 + -1 KIPVEADFLYA 11 119 633.3426183563192 1264.6706837794384 2 633.8446533083916 MULTI CID FTMS 0 0 0 18555 381588.125 1.0 0 0.0 12 Oxidation (M) _RPSQM(Oxidation (M))RKLFS_ ENSG00000164305|ENST00000308394|CASP3 12.240655878213236 0.6421556946785427 3 [VP]EAD{M(Oxidation (M))|F}{I|L}KP 9 -1 27.679 0.0 0.0 2.1887 0.0 0.0 0.0 265.1121870355509 265.1121870355509 9.4918343234356 0.0 0.0 0.0 0 0.0 0.638272163982407 0.0 0.3494850021680094 [VP]EAD{M(Oxidation (M))|F}{I|L}KP 2.1887 - 562 1 1.218 95862.0 1.0 12797 5768 18555 HBL1_DMSO_200M_050219_1,18567 HBL1_DMSO_200M_050219_1,18567,RPSQMRKLFS False False KIPVEADFLYA 88.844172 633.3437 3550294.25 18555.0 ENSG00000164305|ENST00000308394|CASP3 2.2888338565826416 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18568 88.848 230.0 456450.0 25 0 98187.0 + 30691 RFQDLIREL 9 92 595.3378339754025 1188.661115017605 2 595.3382446169853 MULTI CID FTMS 0 0 0 18555 329905.0625 0.7018174524818945 -2 0.1524505615234375 13 Unmodified _RFQDLIREL_ ENSG00000198265|ENST00000358691|HELZ 33.4449034751529 0.1114409586740657 3 {I|L}{M(Oxidation (M))|F}R{I|L}{I|L}{M(Oxidation (M))|F}{I|L} 7 5 56.05 0.0 0.0 4.7154 0.0 0.0 0.0 283.10447107486567 283.10447107486567 37.07193898433481 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.8494850021680094 {I|L}{M(Oxidation (M))|F}R{I|L}{I|L}{M(Oxidation (M))|F}{I|L} 4.7154 - 99 + 1 1.218 83614.6 1.0 12798 5768 18555 HBL1_DMSO_200M_050219_1,18568 HBL1_DMSO_200M_050219_1,18568,RFQDLIREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18569 88.853 245.0 421430.0 25 0 68615.0 + 27369 PIAPAQFL 8 101 428.7495304802188 855.4845080272376 2 428.7498962283134 MULTI CID FTMS 0 0 0 18555 318951.34375 1.0 0 0.0 14 Unmodified _PIAPAQFL_ REV__ENSG00000144331|ENST00000410066|ZNF385B;REV__nc|ENSG00000144331|Q569K4-2|ZNF385B;REV__nc|ENSG00000144331|Q569K4-3|ZNF385B;REV__nc|ENSG00000144331|Q569K4|ZNF385B 24.20995872069341 0.5349487244130675 3 [{I|L}P]AP{M(Oxidation (M))|F} 5 -1 15.686 0.0 0.0 1.8336 0.0 0.0 0.0 327.16629725605065 327.16629725605065 2.191512336730028 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}P]AP{M(Oxidation (M))|F} 1.8336 - 127 1 1.218 87069.4 1.0 12799 5768 18555 HBL1_DMSO_200M_050219_1,18569 HBL1_DMSO_200M_050219_1,18569,PIAPAQFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18570 88.864 601.0 190920.0 25 0 10836.0 + 18218 KVFEHFLENL 10 158 638.3406295366243 1274.6667061400483 2 638.3404418826103 MULTI CID FTMS 0 0 0 18555 241390.046875 0.4992584948152483 2 -0.229278564453125 15 Unmodified _KVFEHFLENL_ ENSG00000198056|ENST00000338193|PRIM1 34.221707139014875 0.2185845369562963 3 {NN|[MP]|[D{I|L}]|[EV]}Q{[CT]|[{M(Oxidation (M))|F}G]}VK{I|L}EN{I|L} 11 5 + 49.07 0.0 0.0 3.8496 3.8496 74.829 0.0 0.0 0.0 6.4213946513320295 8.551985655421362 6.4213946513320295 3.5654732351381284 0 0.6747425010840047 0.721246399047171 0.0 0.8391368308784531 {NN|[MP]|[D{I|L}]|[EV]}Q{[CT]|[{M(Oxidation (M))|F}G]}VK{I|L}EN{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q[R{M(Oxidation (M))|F}]K{I|L}EN{I|L};{[QN]|[E{I|L}]|[KN]}N{[CT]|[{M(Oxidation (M))|F}G]}VK{I|L}EN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}E{[CT]|[{M(Oxidation (M))|F}G]}VK{I|L}EN{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}EVK{M(Oxidation (M))|F}{I|L}EN{I|L};[VS]{I|L}CRQT{I|L}EN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]{[CT]|[{M(Oxidation (M))|F}G]}VK{I|L}EN{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{[CT]|[{M(Oxidation (M))|F}G]}VK{I|L}EGG{I|L};{[QN]|[E{I|L}]|[KN]}N[R{M(Oxidation (M))|F}]K{I|L}EN{I|L};{I|L}{I|L}VC{[QC]|[C(Carbamidomethyl (C))A]}K{I|L}EN{I|L} 3.8496;3.5699;3.3458;3.3078;3.2549;3.1863;3.1335;3.1335;3.0661;3.0547 -;-;-;-;-;-;-;-;-;- 5836 1 1.218 91910.1 1.0 12800 5768 18555 HBL1_DMSO_200M_050219_1,18570 HBL1_DMSO_200M_050219_1,18570,KVFEHFLENL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18571 88.875 654.0 213390.0 25 0 9744.5 + -1 ALHDKEVKML 10 169 600.3288980106817 1198.6432430881632 2 600.3309814333916 MULTI CID FTMS 0 0 0 18555 197677.765625 0.6780021104203209 -2 0.1524505615234375 16 Oxidation (M) _ALHDKEVKM(Oxidation (M))L_ REV__ENSG00000022976|ENST00000442396|ZNF839;REV__nc|ENSG00000022976|A8K0R7-2|ZNF839;REV__nc|ENSG00000022976|A8K0R7|ZNF839 17.11289562659939 0.5604042439455784 3 {NN|[MP]|[D{I|L}]|[EV]}KE{M(Oxidation (M))|F}{I|L}D 7 -1 29.965 0.0 0.0 2.4999 0.0 0.0 0.0 335.1807349846381 335.1807349846381 11.371731930253116 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}KE{M(Oxidation (M))|F}{I|L}D 2.4999 - 4559 1 1.218 102469.6 1.0 12801 5768 18555 HBL1_DMSO_200M_050219_1,18571 HBL1_DMSO_200M_050219_1,18571,ALHDKEVKML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18572 88.88 245.0 360860.0 25 0 23820.0 + -1 MPPEPIII 8 101 909.426568190095 1816.83858344699 2 909.4239379763604 MULTI CID FTMS 0 0 0 18555 186341.78125 1.0 0 0.0 17 nc|ENSG00000066117|Q96GM5-2|SMARCD1;ENSG00000066117|ENST00000394963|SMARCD1 3 QY{M(Oxidation (M))|F}ANQQAE{[ES]|[DT]|[{I|L}C]}C(Carbamidomethyl (C)){I|L} 13 -1 63.718 0.0 0.0 3.5071 0.0 0.0 230.17154350734 0.0 230.17154350734 0.0 54.25437928745655 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 QY{M(Oxidation (M))|F}ANQQAE{[ES]|[DT]|[{I|L}C]}C(Carbamidomethyl (C)){I|L} 3.5071 - 1875 + 1 1.218 63567.2 1.0 12802 5768 18555 HBL1_DMSO_200M_050219_1,18572 HBL1_DMSO_200M_050219_1,18572, False False MPPEPIII 88.879593 909.42393797636 3504304.75 18555.0 nc|ENSG00000066117|Q96GM5-2|SMARCD1;;ENSG00000066117|ENST00000394963|SMARCD1 3.969489733378092 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18573 88.893 708.0 113100.0 25 0 25717.0 -1 0 60 1174.1704302158605 0 1174.172656238079 PEAK CID FTMS 0 0 0 18555 180362.6875 1.0 0 0.0 18 3 E 1 -1 5.4846 0.0 0.0 0.23375 0.0 0.0 1690.0974503049506 524.1630953424436 2214.2605456473943 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.23375 - 8 + 1 1.218 70495.6 1.0 12803 5768 18555 HBL1_DMSO_200M_050219_1,18573 HBL1_DMSO_200M_050219_1,18573, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18574 88.897 187.0 329310.0 25 0 41093.0 + 12371 GTFDNIYLHV 10 100 589.7953098073901 1177.5760666815802 2 589.7955810427666 MULTI CID FTMS 0 0 0 18555 175416.625 0.1870925320331599 3 -0.2745513916015625 19 Unmodified _GTFDNIYLHV_ ENSG00000121579|ENST00000240922|NAA50 14.838274106304384 0.5985701837916485 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y 3 8 25.686 0.0 0.0 2.1813 0.0 0.0 0.0 777.3887984033851 777.3887984033851 3.448751431987596 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y 2.1813 - 266 1 1.218 52882.2 1.0 12804 5768 18555 HBL1_DMSO_200M_050219_1,18574 HBL1_DMSO_200M_050219_1,18574,GTFDNIYLHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18575 88.9 179.0 1143700.0 25 0 159060.0 2915 AVGFLLRH 8 121 456.7743592620088 911.5341655908176 2 456.7760192751884 MULTI CID FTMS 0 0 0 18555 143877.171875 0.4979027084243996 -1 0.0747756958007812 20 Unmodified _AVGFLLRH_ ENST00000396437.3_1_22:42341142-42343146:-|nuORF;nc|ENSG00000100162|Q9NSP4-2|CENPM 42.96799951952854 0.1846367511955703 3 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 7 6 + 89.473 0.0 0.0 9.8157 9.8157 95.643 0.0 0.0 0.0 67.7394811203016 29.009533931899355 29.009533931899355 9.33053210369387 0 1.25 0.0 0.0 1.6496498648046138 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}{[HG]|PP}V;{M(Oxidation (M))|F}N{I|L}{I|L}[RH]{I|L};{M(Oxidation (M))|F}GG{I|L}{I|L}[RH]{I|L};{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}{[HG]|PP}V 9.8157;8.7921;6.1098;5.7648;4.7412;4.676 -;-;-;-;-;- 241 + 1 1.218 159347.2 1.0 12805 5768 18555 HBL1_DMSO_200M_050219_1,18575 HBL1_DMSO_200M_050219_1,18575,AVGFLLRH False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 18577 88.905 58.0 1277300.0 25 0 184250.0 + 21461 LPHLVVSI 8 90 439.2787278575557 876.5429027819115 2 439.2787353396416 MULTI CID FTMS 0 0 0 18576 1464058.25 0.5858863629769767 -1 0.086822509765625 1 Unmodified _LPHLVVSI_ ENSG00000119285|ENST00000366582|HEATR1 38.99230528602208 0.2511498934509823 3 [H{I|L}]P{I|L}VVS{I|L} 8 2 + 54.558 0.0 0.0 6.2242 6.2242 81.429 0.0 0.0 0.0 12.245462655597096 10.172203223519531 10.172203223519531 3.0102999566398125 0 0.8182503180159344 1.3979400086720375 0.0 0.0 [H{I|L}]P{I|L}VVS{I|L};[H{I|L}]PV{I|L}VS{I|L};[H{I|L}]VP{I|L}VS{I|L};[H{I|L}]PVV{I|L}S{I|L};[H{I|L}]VPV{I|L}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}VVS{I|L};[{I|L}P]H{I|L}VVS{I|L};[H{I|L}]VVP{I|L}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}VS{I|L};[{I|L}P]HV{I|L}VS{I|L} 6.2242;5.8808;5.5373;5.3364;4.993;4.8272;4.7589;4.539;4.4837;4.4154 -;-;-;-;-;-;+;-;-;- + 237 1 1.218 63891.7 1.0 12806 5769 18576 HBL1_DMSO_200M_050219_1,18577 HBL1_DMSO_200M_050219_1,18577,LPHLVVSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18578 88.915 592.0 345370.0 25 0 23622.0 + 12700 GVLQDKDLFSV 11 184 610.8283134165683 1219.6420738999366 2 610.8291503787041 MULTI CID FTMS 0 0 0 18576 291956.6875 1.0 0 0.0 2 Unmodified _GVLQDKDLFSV_ ENSG00000138629|ENST00000395081|UBL7 125.18120922955336 0.0506983849239639 3 [VG]{I|L}QSDR{I|L}{M(Oxidation (M))|F}SV 11 3 + 83.591 0.0 0.0 6.8537 6.8537 85.211 0.0 0.0 0.0 5.016742152550947 5.016742152550947 5.016742152550947 4.2737263068969895 0 2.473197507588033 1.5228787452803376 1.2728787452803376 0.4896518287104437 [VG]{I|L}QSDR{I|L}{M(Oxidation (M))|F}SV;[VG]{[CP]|[EA]}RSR{I|L}{M(Oxidation (M))|F}SV;R{I|L}QDDK{I|L}{M(Oxidation (M))|F}SV;[VG]{I|L}QSRD{I|L}{M(Oxidation (M))|F}SV;[VG]SDQ{I|L}R{I|L}{M(Oxidation (M))|F}SV;[VG]SQD{I|L}R{I|L}{M(Oxidation (M))|F}SV;[Q{I|L}]DRSR{I|L}{M(Oxidation (M))|F}SV;[VG]{I|L}QSD{I|L}R{M(Oxidation (M))|F}SV;{NN|[MP]|[D{I|L}]|[EV]}QRSR{I|L}{M(Oxidation (M))|F}SV;[VG]SQ{I|L}DR{I|L}{M(Oxidation (M))|F}SV 6.8537;6.5033;6.4424;6.4019;6.3108;6.2313;6.2068;6.1961;6.1685;6.1599 -;-;-;-;-;-;-;-;-;- 37541 1 1.218 149023.9 1.0 12807 5769 18576 HBL1_DMSO_200M_050219_1,18578 HBL1_DMSO_200M_050219_1,18578,GVLQDKDLFSV True True GVLQDKDLFSV 88.914865 610.829150378704 3528935.0 18576.0 ENSG00000138629|ENST00000395081|UBL7 6.898321946461995 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18579 88.916 8.9 5173000.0 25 0 400130.0 10615 FVLYKYKL 8 61 537.3216340055664 1072.6287150779326 2 537.3212768435478 MULTI CID FTMS 0 0 0 18576 2187055.5 0.7182580959007864 1 -0.1424560546875 3 Unmodified _FVLYKYKL_ ENSG00000189221|ENST00000338702|MAOA;nc|ENSG00000189221|P21397-2|MAOA 20.871210003555333 0.6025813472596342 3 V{M(Oxidation (M))|F}{I|L} 3 6 27.435 0.0 0.0 2.5577 0.0 0.0 0.0 710.3844913804182 710.3844913804182 12.74227503252014 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{M(Oxidation (M))|F}{I|L} 2.5577 - 63 + 1 1.218 40623.4 1.0 12808 5769 18576 HBL1_DMSO_200M_050219_1,18579 HBL1_DMSO_200M_050219_1,18579,FVLYKYKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18580 88.918 96.0 1024300.0 25 0 135070.0 + 27067 SLLMSIHNI 9 117 513.7835842815323 1025.5526156298645 2 514.2834960818291 MULTI CID FTMS 0 0 0 18576 539089.375 0.6169145311640386 -1 0.086822509765625 4 Unmodified _PERVTPQSL_ nc|ENSG00000143398|Q99755-2|PIP5K1A;nc|ENSG00000143398|Q99755-3|PIP5K1A;nc|ENSG00000143398|Q99755-4|PIP5K1A;ENSG00000143398|ENST00000368888|PIP5K1A;nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000480546.1_1_10:95718567-95721153:-|nuORF 26.88365393820708 0.1891292719743517 3 [EP]R{I|L}SM{I|L} 7 5 53.421 0.0 0.0 5.209 0.0 0.0 0.0 196.0948645771928 196.0948645771928 1.8435673875470824 0.0 0.0 0.0 0 0.0 1.154901959985743 1.048455006504028 0.9916440611282626 [EP]R{I|L}SM{I|L} 5.209 - 1468 1 1.218 79088.6 1.0 12809 5769 18576 HBL1_DMSO_200M_050219_1,18580 HBL1_DMSO_200M_050219_1,18580,PERVTPQSL False False SLLMSIHNI 88.91814 514.283496081829 21479738.0 18576.0 nc|ENSG00000143398|Q99755-2|PIP5K1A;;nc|ENSG00000143398|Q99755-3|PIP5K1A;;nc|ENSG00000143398|Q99755-4|PIP5K1A;;ENSG00000143398|ENST00000368888|PIP5K1A;;nc|ENSG00000180764|A2A3N6|PIPSL;;ENST00000480546.1_1_10:95718567-95721153:-|nuORF 5.735988775889079 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18581 88.922 211.0 566150.0 25 0 86724.0 -1 MLEPHSCQYI 10 122 647.285216516121 1292.5558800990418 2 647.2857543826103 MULTI CID FTMS 0 0 0 18576 322849.09375 0.1722185833894883 -2 0.1615982055664062 5 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LEPHSC(Carbamidomethyl (C))QYI_ ENSG00000068912|ENST00000185150|ERLEC1;nc|ENSG00000068912|Q96DZ1-2|ERLEC1;nc|ENSG00000068912|Q96DZ1-3|ERLEC1 26.88365393820708 0.3646707531412818 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))C]S{M(Oxidation (M))|F}QY{I|L} 10 -1 + 48.178 0.0 0.0 3.7273 3.7273 71.012 0.0 0.0 0.0 2.04119982655925 10.012262311882765 2.04119982655925 1.5186375580366729 0 0.7742275032520141 1.5228787452803376 0.3494850021680094 0.3807196863200844 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))C]S{M(Oxidation (M))|F}QY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))C]AQYY{I|L};[{I|L}P]Y[C(Carbamidomethyl (C))C]S{M(Oxidation (M))|F}QY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))C]AYQY{I|L};[{I|L}P]Y[C(Carbamidomethyl (C))C]AQYY{I|L};[{I|L}P]Y[C(Carbamidomethyl (C))C]AYQY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))C]S{M(Oxidation (M))|F}[AG]Y{I|L};[{I|L}P]Y[C(Carbamidomethyl (C))C]S{M(Oxidation (M))|F}[AG]Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))C]AY[AG]Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))C]S{[MG]|[TS]}SY{I|L} 3.7273;3.6098;3.5694;3.4944;3.1815;3.0661;2.7238;2.5658;2.4909;2.4159 -;-;-;-;-;-;-;-;-;- 712 1 1.218 96758.3 1.0 12810 5769 18576 HBL1_DMSO_200M_050219_1,18581 HBL1_DMSO_200M_050219_1,18581,MLEPHSCQYI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18582 88.932 557.0 507280.0 25 0 57898.0 + 45489 YTMGDIIMSF 10 203 589.2668806262473 1176.5192083192944 2 589.2666503787041 MULTI CID FTMS 0 0 0 18576 303019.96875 0.5724184395848493 -1 0.086822509765625 6 Unmodified _YTMGDIIMSF_ REV__ENSG00000055955|ENST00000266041|ITIH4;REV__ENST00000468472.1_1_3:52853923-52864679:-|nuORF;REV__nc|ENSG00000055955|Q14624-2|ITIH4;REV__nc|ENSG00000055955|Q14624-3|ITIH4;REV__nc|ENSG00000055955|Q14624-4|ITIH4 30.63653989081413 0.2803493085145199 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVVE{I|L}V 8 -1 61.123 0.0 0.0 5.1952 0.0 0.0 0.0 237.00090967349848 237.00090967349848 22.54251932316088 0.0 0.0 0.0 0 1.8945990182825423 2.0 0.6549471895720985 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVVE{I|L}V 5.1952 - 10925 + 1 1.218 207203.5 1.0 12811 5769 18576 HBL1_DMSO_200M_050219_1,18582 HBL1_DMSO_200M_050219_1,18582,YTMGDIIMSF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18583 88.945 774.0 377370.0 25 0 30022.0 + 42158 VSAVSQDMTL 10 237 525.7629285842823 0 525.7609741091728 PEAK CID FTMS 0 0 0 18576 159075.140625 0.9370771407243638 4 -0.4275436401367187 7 Unmodified _VSAVSQDMTL_ REV__ENST00000418303.1_1_7:43958366-43959461:+|nuORF 45.69961567697781 0.0726109246736577 3 NV 2 -1 15.486 0.0 0.0 1.4756 0.0 0.0 99.07258120081585 734.3060115185378 833.3785927193537 0.0 0.0 0.0 0.0 0 0.2215141619232908 0.0 0.0 0.3807196863200844 NV 1.4756 - 1394 + 1 1.218 230783.0 1.0 12812 5769 18576 HBL1_DMSO_200M_050219_1,18583 HBL1_DMSO_200M_050219_1,18583,VSAVSQDMTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18584 88.958 722.0 333600.0 25 0 6815.4 + -1 MILDCITV 8 148 964.482611054142 963.475334587542 1 966.4871703982352 MULTI CID FTMS 0 0 0 18576 142185.03125 0.3333144085603073 -2 0.1615982055664062 8 Carbamidomethyl (C) _MILDC(Carbamidomethyl (C))ITV_ REV__ENSG00000153551|ENST00000334983|CMTM7;REV__nc|ENSG00000153551|Q96FZ5-2|CMTM7 19.438996006549623 0.6237395211498085 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[KS]{I|L}EP 8 -1 + 38.488 0.0 0.0 3.9947 3.9947 71.124 0.0 0.0 0.0 1.1708242286103785 14.904630595263413 1.1708242286103785 1.1708242286103785 0 0.0 0.8860566476931632 1.325257498915995 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[KS]{I|L}EP;[{I|L}T]GG{[YD]|[{M(Oxidation (M))|F}M]}{I|L}EP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QTMVEP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EP;[{I|L}T]N{[YD]|[{M(Oxidation (M))|F}M]}{I|L}EP;{NN|[MP]|[D{I|L}]|[EV]}K{[{M(Oxidation (M))|F}C]|[YS]}{I|L}EP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]NVEP;[{I|L}T]G{[YD]|[{M(Oxidation (M))|F}M]}G{I|L}EP;{NN|[MP]|[D{I|L}]|[EV]}KEC{I|L}{M(Oxidation (M))|F}P;[{I|L}T]AA{[{M(Oxidation (M))|F}C]|[YS]}{I|L}EP 3.9947;3.8732;3.7888;3.6823;3.5662;3.564;3.5055;3.4913;3.433;3.2893 -;-;-;-;-;-;-;-;-;- 6059 1 1.218 156374.2 1.0 12813 5769 18576 HBL1_DMSO_200M_050219_1,18584 HBL1_DMSO_200M_050219_1,18584,MILDCITV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18585 88.971 784.0 114930.0 25 0 5987.3 -1 0 114 674.4818438068164 4040.8474040412975 6 674.8195678591728 MULTI CID FTMS 0 0 0 18576 104683.9765625 0.4390606551254488 -8 0.7754440307617188 9 3 {NN|[MP]|[D{I|L}]|[EV]}VG{I|L}{I|L} 6 -1 31.532 0.0 0.0 0.78034 0.0 0.0 0.0 3427.456570871629 3427.456570871629 -0.1759742069302916 0.0 -0.1759742069302916 0.0 0 0.0 1.154901959985743 0.5 0.0 {NN|[MP]|[D{I|L}]|[EV]}VG{I|L}{I|L} 0.78034 - 1453 1 1.218 72202.5 1.0 12814 5769 18576 HBL1_DMSO_200M_050219_1,18585 HBL1_DMSO_200M_050219_1,18585, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18586 88.985 760.0 185670.0 25 0 86428.0 -1 0 97 924.479962663788 0 924.4771606326104 PEAK CID FTMS 0 0 0 18576 93683.890625 0.4199924235939483 4 -0.4275436401367187 10 3 {I|L}AE 3 -1 14.169 0.0 0.0 0.76716 0.0 0.0 923.4727510171072 607.3048189752561 1530.7775699923634 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}AE 0.76716 - 262 + 1 1.218 97715.2 1.0 12815 5769 18576 HBL1_DMSO_200M_050219_1,18586 HBL1_DMSO_200M_050219_1,18586, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18587 89.0 799.0 160320.0 25 0 10328.0 + + 14614 RLLEGYEIYV 10 161 627.8407911295536 1253.6670293259072 2 627.8391601443291 MULTI CID FTMS 0 0 0 18576 86349.421875 0.3738629589329789 2 -0.1877288818359375 11 Unmodified _IIGTIEFWYL_ nc|ENSG00000137337|Q14676-4|MDC1;nc|ENSG00000137337|Q14676-3|MDC1;ENSG00000137337|ENST00000376406|MDC1;nc|ENSG00000137337|Q14676-2|MDC1 23.1484247019978 0.4485954791219598 3 {I|L}{I|L}AVDGYE{I|L}YV 11 -1 + 78.212 0.0 0.0 6.2386 6.2386 83.939 0.0 0.0 0.0 9.542425094393252 16.57577319177794 9.542425094393252 4.771212547196626 0 0.7302046884880937 1.2218487496163564 0.0 0.0 {I|L}{I|L}AVDGYE{I|L}YV;{I|L}{I|L}G{I|L}DGYE{I|L}YV;{[VA]|[{I|L}G]}{I|L}{I|L}DGYE{I|L}YV;{I|L}{I|L}AVDP[HD]{I|L}YV;[{I|L}A]{I|L}VDGYE{I|L}YV;{I|L}{I|L}G{I|L}DP[HD]{I|L}YV;{I|L}{I|L}AVD[WY]{I|L}YV;[{I|L}A]V{I|L}DGYE{I|L}YV;{I|L}{I|L}AV{[ET]|[MV]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}YV;[{I|L}V]A{I|L}DGYE{I|L}YV 6.2386;5.8581;5.4775;5.358;5.2374;4.9774;4.9353;4.8568;4.8467;4.832 -;-;-;-;-;-;-;-;-;- 1859 1 1.218 107148.4 1.0 12816 5769 18576 HBL1_DMSO_200M_050219_1,18587 HBL1_DMSO_200M_050219_1,18587,IIGTIEFWYL False False RLLEGYEIYV 88.999921 627.839160144329 2022597.875 18576.0 nc|ENSG00000137337|Q14676-4|MDC1;;nc|ENSG00000137337|Q14676-3|MDC1;;ENSG00000137337|ENST00000376406|MDC1;;nc|ENSG00000137337|Q14676-2|MDC1 4.91642967859904 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18588 89.014 800.0 54217.0 25 0 3572.0 -1 0 88 834.5283691287041 0 834.5283691287041 PEAK CID FTMS 0 0 0 -1 0 12 3 G{I|L}{M(Oxidation (M))|F}S 4 -1 9.6412 0.0 0.0 0.57834 0.0 0.0 1024.7458729236205 235.07648645572505 1259.8223593793457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L}{M(Oxidation (M))|F}S 0.57834 - 191 + 1 1.218 34499.1 0.959999978542328 12817 5769 18576 HBL1_DMSO_200M_050219_1,18588 HBL1_DMSO_200M_050219_1,18588, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18589 89.029 800.0 167720.0 25 0 13569.0 + -1 KLFDDMMYEL 10 169 660.7965460125606 1319.5785390919211 2 660.7957641482353 MULTI CID FTMS 0 0 0 18576 77316.46875 0.499796930042829 -1 0.086822509765625 13 Oxidation (M) _KLFDDMM(Oxidation (M))YEL_ ENSG00000000460|ENST00000359326|C1orf112 30.7034409873982 0.2788461460996952 3 [Q{I|L}]YVDM{M(Oxidation (M))|F}YE{I|L} 10 -1 + 67.568 0.0 0.0 5.1204 5.1204 85.749 0.0 0.0 0.0 9.493018730907394 46.141303353600094 9.493018730907394 10.135364513755183 0 0.0 1.0 1.110924374808178 0.2302046884880938 [Q{I|L}]YVDM{M(Oxidation (M))|F}YE{I|L};{[VA]|[{I|L}G]}AYVDM{M(Oxidation (M))|F}YE{I|L};[AG]{I|L}YVDM{M(Oxidation (M))|F}YE{I|L};{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]DM{M(Oxidation (M))|F}YE{I|L};[K{I|L}]{M(Oxidation (M))|F}DDM{M(Oxidation (M))|F}YE{I|L};[AG]Y{I|L}VDM{M(Oxidation (M))|F}YE{I|L};[YQ]{I|L}VDM{M(Oxidation (M))|F}YE{I|L};{[VA]|[{I|L}G]}G[Y{I|L}]DM{M(Oxidation (M))|F}YE{I|L};[AG]V[Y{I|L}]DM{M(Oxidation (M))|F}YE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[Y{I|L}]DM{M(Oxidation (M))|F}YE{I|L} 5.1204;4.3523;4.2613;4.2108;4.1882;4.1066;4.0335;3.8573;3.7662;3.7645 -;-;-;-;+;-;-;-;-;- + 1641 1 1.218 102348.9 0.9800000190734864 12818 5769 18576 HBL1_DMSO_200M_050219_1,18589 HBL1_DMSO_200M_050219_1,18589,KLFDDMMYEL False False KLFDDMMYEL 89.028777 660.795764148235 1504258.125 18576.0 ENSG00000000460|ENST00000359326|C1orf112 5.413793245951335 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18590 89.043 800.0 54328.0 25 0 6564.8 -1 0 59 1112.866381824017 0 1112.866381824017 PEAK CID FTMS 0 0 0 -1 0 14 3 S{M(Oxidation (M))|F}EH 4 -1 15.745 0.0 0.0 0.70807 0.0 0.0 1450.434990417274 270.06174646549067 1720.4967368827645 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 S{M(Oxidation (M))|F}EH 0.70807 - 70 + 1 1.218 40949.6 0.9700000286102296 12819 5769 18576 HBL1_DMSO_200M_050219_1,18590 HBL1_DMSO_200M_050219_1,18590, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18592 89.047 1.6 48864000.0 25 0 7080200.0 + 9182 FGGVLILIHR 10 81 375.5692990116058 1123.6860676350177 3 375.5695373415947 MULTI CID FTMS 0 0 0 18591 35789664.0 1.0 0 0.0 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 46.020951573049366 0.1035046897853725 3 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 96.838 0.0 0.0 8.6179 8.6179 94.002 0.0 0.0 0.0 81.820691945434 24.40975163625181 24.40975163625181 9.208187539523747 0 0.6989700043360187 2.0 0.0 1.8243923658886183 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 8.6179;7.7984 -;- 143 + 1 1.217 72474.9 1.0 12820 5770 18591 HBL1_DMSO_200M_050219_1,18592 HBL1_DMSO_200M_050219_1,18592,FGGVLILIHR True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18593 89.048 7.2 4041400.0 25 0 357070.0 9188 FGGVLILIHR 10 46 562.8502122288387 1123.6858715244773 2 562.8504516482353 MULTI CID FTMS 0 0 0 18591 8693883.0 0.9686940693932566 -1 0.1424560546875 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 18.1463463914782 0.5430639438673815 3 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 78.338 0.0 0.0 6.9715 6.9715 90.714 0.0 0.0 0.0 64.35850004969453 11.082268588648247 11.082268588648247 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 6.9715;6.152 -;- 63 + 1 1.217 29616.1 1.0 12821 5770 18591 HBL1_DMSO_200M_050219_1,18593 HBL1_DMSO_200M_050219_1,18593,FGGVLILIHR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18594 89.049 3.5 6097600.0 25 0 338100.0 + 25069 MPVIPMNTI 9 57 508.2690081828018 1014.5234634324036 2 508.2693359255791 MULTI CID FTMS 0 0 0 18591 13767231.0 0.519647415689216 -1 0.1424560546875 3 Unmodified _MPVIPMNTI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 26.34127834903884 0.1960301806784604 3 T{I|L} 2 7 14.693 0.0 0.0 1.4482 0.0 0.0 782.3808680728318 0.0 782.3808680728318 0.0 3.0102999566398108 0.0 0.0 0 0.0 0.0 0.0 0.0 + T{I|L} 1.4482 + + 35 + 1 1.217 26670.1 1.0 12822 5770 18591 HBL1_DMSO_200M_050219_1,18594 HBL1_DMSO_200M_050219_1,18594,MPVIPMNTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18595 89.05 7.8 6171500.0 25 0 614510.0 + 8900 FAFRYVTTI 9 65 559.305377078076 1116.596201222952 2 559.3056518435478 MULTI CID FTMS 0 0 0 18591 6817212.0 0.8486616970191452 -1 0.1424560546875 4 Unmodified _FAFRYVTTI_ ENSG00000187325|ENST00000341864|TAF9B;ENSG00000273841|ENST00000217893|TAF9;ENST00000480681.1_1_X:77393446-77395117:-|nuORF;ENST00000587506.1_1_19:30528395-30528668:+|nuORF 60.07390631473393 0.0260411565414776 3 YVTT{I|L} 5 4 47.792 0.0 0.0 4.2801 0.0 0.0 521.2756144112423 0.0 521.2756144112423 0.0 28.15044357464103 0.0 0.0 0 0.8807196863200843 0.0 0.8807196863200843 0.0 + YVTT{I|L} 4.2801 + + 99 1 1.217 43353.8 1.0 12823 5770 18591 HBL1_DMSO_200M_050219_1,18595 HBL1_DMSO_200M_050219_1,18595,FAFRYVTTI True True FAFRYVTTI 89.050496 559.305651843548 281841248.0 18591.0 ENSG00000187325|ENST00000341864|TAF9B;;ENST00000480681.1_1_X:77393446-77395117:-|nuORF;;ENST00000587506.1_1_19:30528395-30528668:+|nuORF;;ENSG00000273841|ENST00000217893|TAF9 8.739302317301432 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18596 89.052 12.0 4224900.0 25 0 367220.0 36723 TDPILLTSMC 10 78 547.266353952815 1092.51815497243 2 547.2670165896416 MULTI CID FTMS 0 0 0 18591 5609037.0 0.994446983684369 1 -0.0452728271484375 5 Unmodified _TDPILLTSMC_ ENSG00000163833|ENST00000338040|FBXO40 22.736283301280096 0.4578556481593033 3 [TP]DT{I|L}{I|L}{I|L} 7 6 54.39 0.0 0.0 4.9784 0.0 0.0 0.0 336.06439455666754 336.06439455666754 38.905557294309006 0.0 0.0 0.0 0 0.5 1.0457574905606752 1.6237125054200234 0.0 [TP]DT{I|L}{I|L}{I|L} 4.9784 - 226 1 1.217 46891.3 1.0 12824 5770 18591 HBL1_DMSO_200M_050219_1,18596 HBL1_DMSO_200M_050219_1,18596,TDPILLTSMC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18597 89.053 28.0 1871800.0 25 0 241220.0 + 22726 LQIEDFEARI 10 47 617.3264456663845 1232.638338399569 2 617.3268310427666 MULTI CID FTMS 0 0 0 18591 2246805.75 0.5511790842939017 2 -0.1534500122070312 6 Unmodified _LQIEDFEARI_ ENSG00000186010|ENST00000507754|NDUFA13;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13 37.07464296494664 0.1884581770199685 3 [Q{I|L}]{I|L}ED{M(Oxidation (M))|F}EA[R{I|L}] 10 0 + 71.119 0.0 0.0 5.7697 5.7697 91.544 0.0 0.0 0.0 63.460696996448576 4.884381005764311 4.884381005764311 71.11941264025134 0 0.9247425010840048 1.3979400086720375 0.4247425010840047 0.0 + + [Q{I|L}]{I|L}ED{M(Oxidation (M))|F}EA[R{I|L}] 5.7697 + + 81 + 1 1.217 45376.6 1.0 12825 5770 18591 HBL1_DMSO_200M_050219_1,18597 HBL1_DMSO_200M_050219_1,18597,LQIEDFEARI False True LQIEDFEARI 89.052854 617.326831042767 38204420.0 18591.0 ENST00000586674.1_1_19:19627047-19643527:+|nuORF;;nc|ENSG00000186010|Q9P0J0-2|NDUFA13;;ENSG00000186010|ENST00000507754|NDUFA13 3.842110395431519 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18598 89.054 25.0 2068900.0 25 0 220500.0 + 3308 RVFSDIIYTV 10 49 606.8348020248462 1211.6550511164924 2 606.8347656130791 MULTI CID FTMS 0 0 0 18591 2137058.75 0.1890203469458442 2 -0.1534500122070312 7 Unmodified _AYLAWLIYSI_ ENSG00000125676|ENST00000245838|THOC2 28.486842064014134 0.328649637529545 3 YTV 3 9 37.167 0.0 0.0 3.0675 0.0 0.0 830.4655197217643 0.0 830.4655197217643 0.0 6.665090889956673 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.0 YTV 3.0675 - 40 + 1 1.217 43939.0 1.0 12826 5770 18591 HBL1_DMSO_200M_050219_1,18598 HBL1_DMSO_200M_050219_1,18598,AYLAWLIYSI False False RVFSDIIYTV 89.054031 606.834765613079 228948048.0 18591.0 ENSG00000125676|ENST00000245838|THOC2 5.941836992899577 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18599 89.055 33.0 1894700.0 25 0 153030.0 + 1640 ALMPVLNQV 9 91 492.78096866742857 983.5473844016572 2 492.7809936404228 MULTI CID FTMS 0 0 0 18591 1987419.0 0.907471362118661 2 -0.1534500122070312 8 Unmodified _ALMPVLNQV_ ENSG00000223496|ENST00000435634|EXOSC6 67.03532852164291 0.0222449892513529 3 [{I|L}A][KQ]MP 6 7 33.574 0.0 0.0 3.4135 0.0 0.0 0.0 312.1382475665625 312.1382475665625 -0.4157035238736739 0.0 -0.4157035238736739 0.0 0 0.2614393726401688 1.6989700043360187 0.0 1.305462187404089 [{I|L}A][KQ]MP 3.4135 - 568 1 1.217 53221.3 1.0 12827 5770 18591 HBL1_DMSO_200M_050219_1,18599 HBL1_DMSO_200M_050219_1,18599,ALMPVLNQV True True ALMPVLNQV 89.05521 492.780993640423 74901828.0 18591.0 ENSG00000223496|ENST00000435634|EXOSC6 7.140409787495931 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18600 89.056 33.0 1690500.0 25 0 236440.0 + 21491 LPHVPLGVI 9 81 472.7997844401322 943.5850159470646 2 472.7997619509697 MULTI CID FTMS 0 0 0 18591 1856123.5 0.2740462742706199 3 -0.2850875854492187 9 Unmodified _LPHVPLGVI_ ENSG00000115307|ENST00000377526|AUP1;ENST00000462297.1_1_2:74754523-74754670:-|nuORF;ENST00000463900.5_1_2:74753929-74756164:-|nuORF;ENST00000466894.5_1_2:74754206-74756164:-|nuORF;ENST00000486234.1_1_2:74754275-74754965:-|nuORF;nc|ENSG00000115307|Q9Y679-3|AUP1 45.7499826716795 0.0496882803020414 3 [HV]P{I|L}GP{I|L}V{I|L} 9 4 + 79.104 0.0 0.0 8.3833 8.3833 90.3 0.0 0.0 0.0 12.430380486862944 16.478174818886373 12.430380486862944 6.020599913279625 0 0.75 1.3979400086720375 0.0 0.0 [HV]P{I|L}GP{I|L}V{I|L};[HV]P{I|L}PG{I|L}V{I|L};[HV]P{I|L}GPV{I|L}{I|L};[HV]P{I|L}GVP{I|L}{I|L};[HV]P{I|L}PGV{I|L}{I|L};[{I|L}P]HVGP{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VGP{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}GP{I|L}V{I|L};[{I|L}P]HVPG{I|L}V{I|L};[{I|L}P]HVGPV{I|L}{I|L} 8.3833;7.7453;7.7196;7.4006;7.0816;7.066;6.6085;6.5828;6.4279;6.4023 -;-;-;-;-;-;-;-;-;- 596 1 1.217 49529.6 1.0 12828 5770 18591 HBL1_DMSO_200M_050219_1,18600 HBL1_DMSO_200M_050219_1,18600,LPHVPLGVI True True LPHVPLGVI 89.05639 472.79976195097 155788352.0 18591.0 ENST00000466894.5_1_2:74754206-74756164:-|nuORF;;ENST00000486234.1_1_2:74754275-74754965:-|nuORF;;ENST00000463900.5_1_2:74753929-74756164:-|nuORF;;nc|ENSG00000115307|Q9Y679-3|AUP1;;ENST00000462297.1_1_2:74754523-74754670:-|nuORF;;ENSG00000115307|ENST00000377526|AUP1 4.253306229909261 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18601 89.058 69.0 979530.0 25 0 108980.0 + + 39028 SLQSTILGV 9 92 459.2683719921142 916.5221910510284 2 459.2683593630791 MULTI CID FTMS 0 0 0 18591 1555265.75 0.6000662275035318 2 -0.1534500122070312 10 Unmodified _TVTINTLGV_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 24.67388899826682 0.2172451872415813 3 {[TV]|[{I|L}S]}[NP]S{I|L} 6 -1 28.663 0.0 0.0 3.1273 0.0 0.0 0.0 302.17176315479725 302.17176315479725 8.485221620214105 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.0 0.3054621874040891 {[TV]|[{I|L}S]}[NP]S{I|L} 3.1273 - 326 1 1.217 55246.0 1.0 12829 5770 18591 HBL1_DMSO_200M_050219_1,18601 HBL1_DMSO_200M_050219_1,18601,TVTINTLGV False False SLQSTILGV 89.058019 459.268359363079 18241064.0 18591.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 2.3436075846354165 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18602 89.059 39.0 1620900.0 25 0 223270.0 + 45755 YYISPRLTF 9 64 580.3108966406983 1158.6072403481965 2 580.3104736208916 MULTI CID FTMS 0 0 0 18591 1079354.375 0.0305135510036029 7 -0.6427230834960938 11 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 17.11289562659939 0.3734572693229295 3 YY{I|L}S 4 5 59.993 0.0 0.0 5.178 0.0 0.0 0.0 629.3411790955832 629.3411790955832 46.59446767649864 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + YY{I|L}S 5.178 + + 64 + 1 1.217 55184.1 1.0 12830 5770 18591 HBL1_DMSO_200M_050219_1,18602 HBL1_DMSO_200M_050219_1,18602,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18603 89.061 89.0 845600.0 25 0 67645.0 + 2342 AQLELISRL 9 106 521.8165366196679 1041.6185203061357 2 521.8160888552666 MULTI CID FTMS 0 0 0 18591 1025489.1875 0.2835691284118523 3 -0.2850875854492187 12 Unmodified _AQLELISRL_ ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12 40.23920728925047 0.0741434193262949 3 [QA]{I|L}E{I|L}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 9 2 + 60.396 0.0 0.0 5.7983 5.7983 85.865 0.0 0.0 0.0 43.11629054940951 4.762036441594191 4.762036441594191 8.57840941039747 0 1.3807196863200843 0.8239087409443188 0.4247425010840047 0.0 [QA]{I|L}E{I|L}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[QA]{I|L}{I|L}E{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 5.7983;4.9748 -;- 262 + 1 1.217 62830.9 1.0 12831 5770 18591 HBL1_DMSO_200M_050219_1,18603 HBL1_DMSO_200M_050219_1,18603,AQLELISRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18604 89.062 34.0 1578500.0 25 0 154970.0 + 16423 IYYFKANVF 9 78 582.8077847903214 1163.6010166474427 2 582.8080932497978 MULTI CID FTMS 0 0 0 18591 977090.0 0.8163682208436079 2 -0.1534500122070312 13 Unmodified _IYYFKANVF_ ENSG00000111229|ENST00000228825|ARPC3 23.1484247019978 0.2366544122328345 3 [Y{I|L}]Y{M(Oxidation (M))|F} 4 5 41.242 0.0 0.0 3.5444 0.0 0.0 0.0 574.2998751275999 574.2998751275999 25.04432191740108 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + [Y{I|L}]Y{M(Oxidation (M))|F} 3.5444 + + 123 + 1 1.217 47129.4 1.0 12832 5770 18591 HBL1_DMSO_200M_050219_1,18604 HBL1_DMSO_200M_050219_1,18604,IYYFKANVF False True IYYFKANVF 89.06236 582.808093249798 13641299.0 18591.0 ENSG00000111229|ENST00000228825|ARPC3 4.513816754023234 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18605 89.064 80.0 1330100.0 25 0 213060.0 18696 LAIWEASL 8 105 451.75254133747273 901.4905297417456 2 451.7523986697197 MULTI CID FTMS 0 0 0 18591 896128.5 0.0384081331617901 39 -4.156166076660156 14 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 42.96799951952854 0.1846367511955703 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 3 52.44 0.0 0.0 5.817 0.0 0.0 0.0 199.1094145894747 199.1094145894747 33.18713533038057 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 5.817 - 541 1 1.217 88559.0 1.0 12833 5770 18591 HBL1_DMSO_200M_050219_1,18605 HBL1_DMSO_200M_050219_1,18605,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18606 89.066 83.0 599180.0 25 0 60224.0 + 16783 KGIDYDFPSL 10 73 577.7916845091363 1153.5688160850725 2 577.7898437380791 MULTI CID FTMS 0 0 0 18591 740751.375 0.6969382639213042 -7 0.712677001953125 15 Unmodified _KGIDYDFPSL_ ENSG00000155438|ENST00000285814|NIFK;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 53.4695610476455 0.0597873748650233 3 [PS]TKYD{M(Oxidation (M))|F}PS{I|L} 10 4 + 82.556 0.0 0.0 7.1566 7.1566 92.757 0.0 0.0 0.0 12.21514161923291 18.851971076465475 12.21514161923291 12.21514161923291 0 0.8182503180159344 1.2218487496163564 2.27697634932738 0.0 [PS]TKYD{M(Oxidation (M))|F}PS{I|L};[VG]EKYD{M(Oxidation (M))|F}PS{I|L};[PS]TKYDE{[DS]|[MA]|[CV]|TT}{I|L};[PS]TK{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}PS{I|L};[VG]EKYDE{[DS]|[MA]|[CV]|TT}{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}YD{M(Oxidation (M))|F}PS{I|L};[VG]EK{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}PS{I|L};[PS]TK{M(Oxidation (M))|F}[HN][NP]{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}YDE{[DS]|[MA]|[CV]|TT}{I|L};[PS]TK[WD]P[NP]{I|L} 7.1566;6.0977;5.7036;4.881;4.6447;4.5409;3.8221;3.2357;3.0879;3.0831 -;-;-;-;-;-;-;-;-;- 325 1 1.217 44868.0 1.0 12834 5770 18591 HBL1_DMSO_200M_050219_1,18606 HBL1_DMSO_200M_050219_1,18606,KGIDYDFPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18607 89.068 64.0 944950.0 25 0 170780.0 + 9556 FLHYIKLIRH 10 76 447.2727979870097 1338.7965645612292 3 447.2726318240166 MULTI CID FTMS 0 0 0 18591 664313.75 0.5530249455456939 -1 0.1424560546875 16 Unmodified _FLHYIKLIRH_ REV__ENSG00000149311|ENST00000675843|ATM;REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF;REV__ENST00000533733.5_1_11:108158320-108160529:+|nuORF 3.2813086475875832 0.7114585191678878 3 R 1 -1 10.485 0.0 0.0 0.78313 0.0 0.0 1164.6847461791965 0.0 1164.6847461791965 0.0 5.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.78313 + + 12 + 1 1.217 59898.3 1.0 12835 5770 18591 HBL1_DMSO_200M_050219_1,18607 HBL1_DMSO_200M_050219_1,18607,FLHYIKLIRH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18608 89.069 66.0 1221800.0 25 0 169220.0 + 15389 IPPDLFARM 9 86 530.2858108637367 1058.5570687942734 2 530.2865478396416 MULTI CID FTMS 0 0 0 18591 572329.125 0.6638061321958659 -1 0.1424560546875 17 Unmodified _IPPDLFARM_ ENSG00000187735|ENST00000521604|TCEA1;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;nc|ENSG00000187735|P23193-2|TCEA1 29.081581746732265 0.1611639662936252 3 {I|L}PPD{I|L}[{I|L}T][YQ] 9 4 + 66.859 0.0 0.0 6.316 6.316 90.044 0.0 0.0 0.0 42.37765543582988 3.9904371307691378 3.9904371307691378 11.048027368576712 0 0.4247425010840047 2.0 0.3494850021680094 0.3252574989159953 {I|L}PPD{I|L}[{I|L}T][YQ];{I|L}PPDTQ[Y{I|L}]{I|L};{I|L}PE[VP]T{I|L}[YQ];{I|L}M[YK]T{I|L}[YQ];{I|L}{I|L}[R{M(Oxidation (M))|F}]{[MG]|[TS]}P[EP] 6.316;5.2723;4.3567;3.0878;0.65524 -;-;-;-;- 456 + 1 1.217 73808.6 1.0 12836 5770 18591 HBL1_DMSO_200M_050219_1,18608 HBL1_DMSO_200M_050219_1,18608,IPPDLFARM False True IPPDLFARM 89.069183 530.286547839642 18297766.0 18591.0 nc|ENSG00000187735|P23193-2|TCEA1;;ENSG00000187735|ENST00000521604|TCEA1;;ENST00000521086.6_1_8:54891227-54912595:-|nuORF 0.2286011775334676 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18609 89.077 462.0 481090.0 25 0 61116.0 -1 RLLDLDIPMSV 11 142 644.3525519342716 1286.690550935343 2 644.3518554568291 MULTI CID FTMS 0 0 0 18591 497209.09375 0.5968449766441558 -2 0.229278564453125 18 Oxidation (M) _RLLDLDIPM(Oxidation (M))SV_ ENSG00000153560|ENST00000283629|UBP1;nc|ENSG00000153560|Q9NZI7-4|UBP1 69.33821966488729 0.0343223916712224 3 {NN|[MP]|[D{I|L}]|[EV]}GV{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W 11 -1 + 57.914 0.0 0.0 4.501 4.501 74.307 0.0 0.0 0.0 2.1645453840626985 7.30616517352734 2.1645453840626985 2.1645453840626985 0 1.4731975075880328 0.9208187539523752 1.385151878060192 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}GV{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;[VS][TP]{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;{[QN]|[E{I|L}]|[KN]}AA{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;[TP]SV{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;{I|L}{I|L}RD{I|L}D{I|L}P{M(Oxidation (M))|F}W;{[TV]|[{I|L}S]}[PS]{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;{[QN]|[E{I|L}]|[KN]}[RV]{I|L}D{I|L}P{M(Oxidation (M))|F}W;{[TV]|[{I|L}S]}{I|L}[PS]{I|L}D{I|L}P{M(Oxidation (M))|F}W;{[QN]|[E{I|L}]|[KN]}GVV{I|L}D{I|L}P{M(Oxidation (M))|F}W;{NN|[MP]|[D{I|L}]|[EV]}GV{I|L}{I|L}D{I|L}PT[MT] 4.501;4.3328;4.1032;4.0987;3.8325;3.8119;3.5545;3.4442;3.4088;3.3822 -;-;-;-;-;-;-;-;-;- 2369 1 1.217 166555.5 1.0 12837 5770 18591 HBL1_DMSO_200M_050219_1,18609 HBL1_DMSO_200M_050219_1,18609,RLLDLDIPMSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18610 89.086 506.0 293800.0 25 0 14960.0 -1 0 107 943.478989660451 1884.943426387702 2 943.480029284954 MULTI CID FTMS 0 0 0 18591 435851.65625 1.0 0 0.0 19 3 [NP]N{I|L}[YC(Carbamidomethyl (C))]SG{I|L}T{I|L} 11 -1 51.238 0.0 0.0 2.7183 0.0 0.0 0.0 649.3337089879439 649.3337089879439 2.5053876539004136 0.0 0.0 0.0 0 0.6694451763165201 0.0 0.3252574989159953 1.1861818737241734 [NP]N{I|L}[YC(Carbamidomethyl (C))]SG{I|L}T{I|L} 2.7183 - 7395 1 1.217 98678.5 1.0 12838 5770 18591 HBL1_DMSO_200M_050219_1,18610 HBL1_DMSO_200M_050219_1,18610, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18611 89.088 70.0 684450.0 25 0 102740.0 -1 FMRRMICL 8 74 551.2732725902919 1100.5319922473836 2 551.2735473513603 MULTI CID FTMS 0 0 0 18591 380976.96875 0.8150950801170834 -1 0.1424560546875 20 2 Oxidation (M) _FM(Oxidation (M))RRM(Oxidation (M))ICL_ ENSG00000224960|ENST00000412172|PPP4R3C;nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C 19.438996006549623 0.6237395211498085 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}C{I|L} 9 -1 + 46.616 0.0 0.0 4.2358 4.2358 78.276 0.0 0.0 0.0 3.440899702813028 36.15865011156764 3.440899702813028 5.752574989159953 0 0.4247425010840047 0.0 0.3494850021680094 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}Y{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}C{I|L};[Q{I|L}][WY]Y{I|L}C{I|L};{[QN]|[E{I|L}]|[KN]}[HQ][{M(Oxidation (M))|F}V]{I|L}C{I|L};[Q{I|L}]{[YC]|[HE]}[{M(Oxidation (M))|F}V]{I|L}C{I|L} 4.2358;3.7131;3.6912;3.1647;2.1425 -;-;-;-;- 82 1 1.217 39588.0 1.0 12839 5770 18591 HBL1_DMSO_200M_050219_1,18611 HBL1_DMSO_200M_050219_1,18611,FMRRMICL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18613 89.092 44.0 1315400.0 25 0 319900.0 + 27248 PGSTHQAP 8 62 397.6927891020698 793.3710252709396 2 397.6925842165947 MULTI CID FTMS 0 0 0 18612 1113080.875 0.5810103416763331 1 -0.1081771850585937 1 Unmodified _PGSTHQAP_ REV__ENST00000341049.6_1_7:116164903-116165062:+|nuORF 2.889219685676258 0.8067950007271085 3 [DV]{I|L} 3 -1 28.952 0.0 0.0 3.6493 0.0 0.0 0.0 463.16689864423967 463.16689864423967 16.73393743112328 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [DV]{I|L} 3.6493 - 36 1 1.217 50873.7 1.0 12840 5771 18612 HBL1_DMSO_200M_050219_1,18613 HBL1_DMSO_200M_050219_1,18613,PGSTHQAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18614 89.093 17.0 2897300.0 25 0 214840.0 + 15083 IMLEALERV 9 68 537.3040469435826 1072.5935409539652 2 537.3046752810478 MULTI CID FTMS 0 0 0 18612 852087.875 0.1478446020249845 4 -0.4155807495117187 2 Unmodified _IMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 17.44264345198275 0.3645313841742926 3 {I|L}M{I|L}EA{I|L}RD{I|L} 9 3 + 70.5 0.0 0.0 6.5728 6.5728 82.996 0.0 0.0 0.0 36.47817481888637 3.182503180159344 3.182503180159344 3.182503180159344 0 0.6677353201839438 2.0 0.0 0.0 {I|L}M{I|L}EA{I|L}RD{I|L};{I|L}M{I|L}EA{I|L}E[RV];[{M(Oxidation (M))|F}V][VG]{I|L}AE{I|L}[EP];{I|L}[{M(Oxidation (M))|F}V][TP]{I|L}E[RV];[{M(Oxidation (M))|F}V]{I|L}[TP]{I|L}E[RV];[{M(Oxidation (M))|F}V]{I|L}[TP]{I|L}[RD]{I|L};{I|L}TY[RH]E[RV] 6.5728;6.2761;2.3661;1.7863;1.5056;1.5056;0.74938 -;+;-;-;-;-;- + 159 + 1 1.217 49646.5 1.0 12841 5771 18612 HBL1_DMSO_200M_050219_1,18614 HBL1_DMSO_200M_050219_1,18614,IMLEALERV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18615 89.095 18.0 1341300.0 25 0 362750.0 + -1 RWLITWFVLLL 11 47 501.3027521985453 1500.8864271958355 3 501.3029052615166 MULTI CID FTMS 0 0 0 18612 2647617.0 1.0 0 0.0 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RWLITWFVLLL_ REV__ENST00000555259.5_1_14:31112578-31185169:+|nuORF 0.3506318815782774 0.8734936314171269 3 {[QN]|[E{I|L}]|[KN]}Q 3 -1 20.915 0.0 0.0 1.3935 0.0 0.0 0.0 1127.677692414839 1127.677692414839 8.150939967924593 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[QN]|[E{I|L}]|[KN]}Q 1.3935 - 15 1 1.217 33646.3 1.0 12842 5771 18612 HBL1_DMSO_200M_050219_1,18615 HBL1_DMSO_200M_050219_1,18615,RWLITWFVLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18616 89.096 36.0 1152600.0 25 0 150070.0 + 131 AALEEADKMFL 11 63 619.3099869338249 1236.6054209344495 2 619.3102294802666 MULTI CID FTMS 0 0 0 18612 1668482.375 0.2318159900675837 3 -0.2901077270507812 4 Unmodified _AALEEADKMFL_ ENSG00000255302|ENST00000530028|EID1;nc|ENSG00000255302|Q9Y6B2-2|EID1 57.24910588100465 0.0803095280301687 3 AATAME{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 9 7 40.377 0.0 0.0 3.2651 0.0 0.0 0.0 252.1373140919885 252.1373140919885 16.190257421222398 0.0 0.0 0.0 0 0.4247425010840047 1.154901959985743 1.305462187404089 0.0 AATAME{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 3.2651 - 869 1 1.217 36780.1 1.0 12843 5771 18612 HBL1_DMSO_200M_050219_1,18616 HBL1_DMSO_200M_050219_1,18616,AALEEADKMFL True True AALEEADKMFL 89.095766 619.310229480267 301750520.0 18612.0 ENSG00000255302|ENST00000530028|EID1;;nc|ENSG00000255302|Q9Y6B2-2|EID1 7.960880438486735 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18617 89.097 60.0 945840.0 25 0 98086.0 + 10771 FYPELKLAY 9 60 572.3081912761447 1142.6018296190894 2 572.3079101443291 MULTI CID FTMS 0 0 0 18612 939309.9375 1.0 0 0.0 5 Unmodified _FYPELKLAY_ ENSG00000157349|ENST00000288071|DDX19B;ENSG00000168872|ENST00000302243|DDX19A;ENST00000562140.2_1_16:70398455-70404584:+|nuORF;ENST00000566574.5_1_16:70398922-70399087:+|nuORF;ENST00000567012.5_1_16:70398922-70400166:+|nuORF;ENST00000569319.5_1_16:70395351-70399888:+|nuORF;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;nc|ENSG00000168872|Q9NUU7-2|DDX19A;nc|ENSG00000260537|Q9UMR2-2|DDX19B;nc|ENSG00000260537|Q9UMR2-3|DDX19B;nc|ENSG00000260537|Q9UMR2-4|DDX19B 25.399314129420983 0.2080152500878129 3 [EP]{I|L}K{I|L}A 6 3 46.643 0.0 0.0 4.0822 0.0 0.0 0.0 488.1828619430731 488.1828619430731 13.30530004019301 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.4247425010840047 0.0 + [EP]{I|L}K{I|L}A 4.0822 + + 97 1 1.217 51269.3 1.0 12844 5771 18612 HBL1_DMSO_200M_050219_1,18617 HBL1_DMSO_200M_050219_1,18617,FYPELKLAY False True FYPELKLAY 89.097264 572.307910144329 18301408.0 18612.0 ENST00000566574.5_1_16:70398922-70399087:+|nuORF;;nc|ENSG00000168872|Q9NUU7-2|DDX19A;;ENST00000567012.5_1_16:70398922-70400166:+|nuORF;;ENST00000569319.5_1_16:70395351-70399888:+|nuORF;;ENSG00000168872|ENST00000302243|DDX19A;;nc|ENSG00000260537|Q9UMR2-4|DDX19B;;nc|ENSG00000260537|Q9UMR2-2|DDX19B;;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;;nc|ENSG00000260537|Q9UMR2-3|DDX19B;;ENST00000562140.2_1_16:70398455-70404584:+|nuORF;;ENSG00000157349|ENST00000288071|DDX19B 6.90594498316447 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18618 89.098 44.0 871040.0 25 0 67386.0 + 29444 SVVPQQLLTV 10 76 542.3242772042239 0 542.3243286013603 PEAK CID FTMS 0 0 0 18612 658688.8125 1.0 0 0.0 6 Unmodified _QLGVVLDLQV_ nc|ENSG00000072310|P36956-5|SREBF1;ENSG00000072310|ENST00000261646|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1 24.020572477871973 0.2658879206942018 3 Q{I|L}Q{I|L}{I|L}Q 6 5 25.126 0.0 0.0 2.3208 0.0 0.0 134.09225593567436 222.08880029849848 356.18105623417284 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L}Q{I|L}{I|L}Q 2.3208 - 200 + 1 1.217 37922.5 1.0 12845 5771 18612 HBL1_DMSO_200M_050219_1,18618 HBL1_DMSO_200M_050219_1,18618,QLGVVLDLQV False False SVVPQQLLTV 89.098498 542.32432860136 5843867.0 18612.0 nc|ENSG00000072310|P36956-5|SREBF1;;ENSG00000072310|ENST00000261646|SREBF1;;nc|ENSG00000072310|P36956-3|SREBF1;;nc|ENSG00000072310|P36956-6|SREBF1;;nc|ENSG00000072310|P36956-2|SREBF1;;nc|ENSG00000072310|P36956-4|SREBF1 2.5644478003184 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18619 89.102 171.0 307950.0 25 0 121540.0 + -1 RQILQRLTLRY 11 57 751.4502457048825 1500.885938476565 2 751.4502441287041 MULTI CID FTMS 0 0 0 18612 591098.5625 1.0 0 0.0 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RQILQRLTLRY_ REV__ENST00000531452.5_2_11:117109819-117110547:+|nuORF 0.3070304955306653 0.8736993455979228 3 [DV]{I|L}E 4 -1 11.427 0.0 0.0 0.76133 0.0 0.0 0.0 1041.6430545256462 1041.6430545256462 1.0480714659967203 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 [DV]{I|L}E 0.76133 - 13 1 1.217 55956.4 1.0 12846 5771 18612 HBL1_DMSO_200M_050219_1,18619 HBL1_DMSO_200M_050219_1,18619,RQILQRLTLRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18620 89.104 82.0 529200.0 25 0 61550.0 -1 ITTCGRCVS 9 59 527.2430461162483 1052.4715392992964 2 527.2429077029228 MULTI CID FTMS 0 0 0 18612 492092.71875 0.751873456572019 -1 0.0452728271484375 8 2 Carbamidomethyl (C) _ITTC(Carbamidomethyl (C))GRC(Carbamidomethyl (C))VS_ ENSG00000150625|ENST00000393658|GPM6A;nc|ENSG00000150625|P51674-2|GPM6A;nc|ENSG00000150625|P51674-3|GPM6A 10.073929032068715 0.563993802247229 3 {I|L}T 2 -1 24.464 0.0 0.0 2.3244 0.0 0.0 0.0 835.3176473107472 835.3176473107472 9.547509540478032 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}T 2.3244 + + 15 + 1 1.217 39049.9 1.0 12847 5771 18612 HBL1_DMSO_200M_050219_1,18620 HBL1_DMSO_200M_050219_1,18620,ITTCGRCVS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18621 89.106 131.0 608480.0 25 0 61882.0 + 22100 LPPPVFQM 8 109 464.7509811866896 927.4874094401792 2 464.7517883181572 MULTI CID FTMS 0 0 0 18612 451527.0625 0.903275483948285 3 -0.2901077270507812 9 Unmodified _LPPPVFQM_ ENSG00000173726|ENST00000366607|TOMM20;ENST00000534518.1_1_11:77024925-77025045:+|nuORF 56.04830969593885 0.114297258605095 3 [{I|L}P]PPV{M(Oxidation (M))|F}QM 8 0 + 41.859 0.0 0.0 4.5132 4.5132 76.329 0.0 0.0 0.0 8.064250275506879 10.172203223519531 8.064250275506879 3.309932190414244 0 1.0924778212679485 1.6989700043360187 0.0 0.0 + + [{I|L}P]PPV{M(Oxidation (M))|F}QM;[{I|L}P]{[ET]|[MV]}{I|L}PQM;[{I|L}P]{[ET]|[MV]}P{I|L}QM;[VP]PP{I|L}{M(Oxidation (M))|F}QM;[YN]{M(Oxidation (M))|F}{I|L}K{I|L}M;[VP]P{M(Oxidation (M))|F}{I|L}PQM;[VP]PP{M(Oxidation (M))|F}{I|L}QM;[VP]P{M(Oxidation (M))|F}P{I|L}QM;[{I|L}P]P{[ET]|[MV]}{I|L}QM;[{I|L}P]{[ET]|[MV]}PQ{I|L}M 4.5132;4.1563;4.1563;3.6437;3.3594;3.3192;3.3192;3.3192;3.2452;3.2115 +;-;-;-;-;-;-;-;-;- + 354 1 1.217 66098.2 1.0 12848 5771 18612 HBL1_DMSO_200M_050219_1,18621 HBL1_DMSO_200M_050219_1,18621,LPPPVFQM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18622 89.11 206.0 540740.0 25 0 60958.0 + 20742 LLSPVVPQI 9 136 483.30494103583993 964.59532913848 2 483.3049499392509 MULTI CID FTMS 0 0 0 18612 335000.8125 1.0 0 0.0 10 Unmodified _LLSPVVPQI_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 67.34385681178166 0.0221257235307089 3 {[TV]|[{I|L}S]}R{I|L}{I|L}VS 7 7 54.658 0.0 0.0 5.6664 0.0 0.0 0.0 193.0987337701781 193.0987337701781 26.24777462427845 0.0 0.0 0.0 0 0.5 1.3979400086720375 1.110924374808178 0.0 {[TV]|[{I|L}S]}R{I|L}{I|L}VS 5.6664 - 1260 + 1 1.217 89708.2 1.0 12849 5771 18612 HBL1_DMSO_200M_050219_1,18622 HBL1_DMSO_200M_050219_1,18622,LLSPVVPQI True True LLSPVVPQI 89.110316 483.304949939251 3516249.5 18612.0 nc|ENSG00000102900|Q8N1F7-2|NUP93;;ENSG00000102900|ENST00000308159|NUP93 5.043041547139485 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18623 89.12 539.0 256040.0 25 0 53296.0 19319 LELRVRVLDIN 11 132 670.4055020229365 1338.796451112673 2 670.4055053591728 MULTI CID FTMS 0 0 0 18612 304600.6875 0.993741923545703 1 -0.1081771850585937 11 Unmodified _LELRVRVLDIN_ ENSG00000134760|ENST00000257192|DSG1 5.296884461304476 0.8501568894076437 3 [{I|L}T]T{I|L}C(Carbamidomethyl (C)) 5 9 15.393 0.0 0.0 1.1498 0.0 0.0 0.0 747.4780056383166 747.4780056383166 4.908433843706582 0.0 0.0 0.0 0 0.0 0.744727494896694 0.2887254899964357 0.0 [{I|L}T]T{I|L}C(Carbamidomethyl (C)) 1.1498 - 288 1 1.217 119646.6 1.0 12850 5771 18612 HBL1_DMSO_200M_050219_1,18623 HBL1_DMSO_200M_050219_1,18623,LELRVRVLDIN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18624 89.126 320.0 414850.0 25 0 97854.0 + 15194 IPEPPMLL 8 124 455.259313833082 908.504074732964 2 455.2601501345634 MULTI CID FTMS 0 0 0 18612 296942.28125 0.6099721196774017 -3 0.2745513916015625 12 Unmodified _IPEPPMLL_ REV__ENSG00000066117|ENST00000394963|SMARCD1;REV__nc|ENSG00000066117|Q96GM5-2|SMARCD1 40.44857923139169 0.2267865117615937 3 [{I|L}P][EP]PM{I|L}{I|L} 8 -1 + 45.087 0.0 0.0 4.9627 4.9627 55.506 0.0 0.0 0.0 0.0 16.40978057358332 0.0 0.0 0 0.5 1.3979400086720375 0.2742275032520141 0.0 [{I|L}P][EP]PM{I|L}{I|L};[EP]P{I|L}PM{I|L}{I|L};[EP]PMP{I|L}{I|L}{I|L};{[HG]|PP}E{I|L}PM{I|L}{I|L};{[HG]|PP}EMP{I|L}{I|L}{I|L};[EP]P{I|L}P{I|L}M{I|L};[{I|L}P][EP]P{I|L}M{I|L};{[HG]|PP}E{I|L}P{I|L}M{I|L};{NN|[MP]|[D{I|L}]|[EV]}[EP]P{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[YK]M{I|L}{I|L} 4.9627;4.9627;4.6609;4.4117;4.1099;3.8872;3.8872;3.3362;2.8546;2.4805 +;-;-;-;-;-;-;-;-;- + 310 1 1.217 105716.4 1.0 12851 5771 18612 HBL1_DMSO_200M_050219_1,18624 HBL1_DMSO_200M_050219_1,18624,IPEPPMLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18625 89.135 554.0 520790.0 25 0 151820.0 + 24233 MALPEEYRDYF 11 150 717.3229847934894 1432.6314166537786 2 717.3238403201103 MULTI CID FTMS 0 0 0 18612 296640.40625 1.0 0 0.0 13 Unmodified _MALPEEYRDYF_ ENSG00000134014|ENST00000256398|ELP3;nc|ENSG00000134014|Q9H9T3-2|ELP3;nc|ENSG00000134014|Q9H9T3-4|ELP3;nc|ENSG00000134014|Q9H9T3-5|ELP3 63.22749603027936 0.0560465731344335 3 MA{I|L}PEEC(Carbamidomethyl (C)){I|L}SAPC{I|L} 13 7 + 99.719 0.0 0.0 6.9606 6.9606 81.022 0.0 0.0 0.0 15.869611518063806 1.4151613584964196 1.4151613584964196 1.4151613584964196 0 1.0 1.6989700043360187 1.7856668758921828 0.0 MA{I|L}PEEC(Carbamidomethyl (C)){I|L}SAPC{I|L};MA{I|L}PEEC(Carbamidomethyl (C)){I|L}SP{[WT]|[RM]};MA{I|L}PEEC(Carbamidomethyl (C)){I|L}SPAC{I|L};MA{I|L}PEEC(Carbamidomethyl (C)){I|L}S{[WT]|[RM]}P;MA{I|L}PEEC(Carbamidomethyl (C)){I|L}SA{[ES]|[DT]|[{I|L}C]}P;MA{I|L}PEEY[NG]PPC{I|L};MA{I|L}PEE[CG]{I|L}SAPC{I|L};MA{I|L}PEE[CG]{I|L}SP{[WT]|[RM]};MA{I|L}PEE[CG]{I|L}SPAC{I|L};MA{I|L}PEEYHMPC{I|L} 6.9606;6.8618;6.7909;6.4883;6.4404;6.4158;6.3273;6.2267;6.1576;6.1547 -;-;-;-;-;-;-;-;-;- 10406 + 1 1.217 203487.6 1.0 12852 5771 18612 HBL1_DMSO_200M_050219_1,18625 HBL1_DMSO_200M_050219_1,18625,MALPEEYRDYF True True MALPEEYRDYF 89.135362 717.32384032011 3086705.75 18612.0 nc|ENSG00000134014|Q9H9T3-5|ELP3;;nc|ENSG00000134014|Q9H9T3-2|ELP3;;ENSG00000134014|ENST00000256398|ELP3;;nc|ENSG00000134014|Q9H9T3-4|ELP3 6.979601224263509 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18626 89.145 577.0 396250.0 25 0 26565.0 + 24026 LVYPEELKPVL 11 148 650.3814124039818 1298.7482718747635 2 650.3795654177666 MULTI CID FTMS 0 0 0 18612 258085.625 0.4084208052616581 -3 0.2745513916015625 14 Unmodified _LVYPEELKPVL_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 38.61474834105838 0.2337350513322792 3 [{I|L}V]YPEE{I|L}KPV{I|L} 11 0 + 64.206 0.0 0.0 4.9437 4.9437 81.479 0.0 0.0 0.0 19.43851908737721 6.690067809585756 6.690067809585756 6.690067809585756 0 1.0 1.6989700043360187 0.3252574989159953 0.0 + + [{I|L}V]YPEE{I|L}KPV{I|L};[{I|L}V]YPEE{I|L}KP{I|L}V;[{I|L}V]YPEE{I|L}K{I|L}PV 4.9437;4.4286;4.4137 +;-;- + 3775 + 1 1.217 171489.2 1.0 12853 5771 18612 HBL1_DMSO_200M_050219_1,18626 HBL1_DMSO_200M_050219_1,18626,LVYPEELKPVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18627 89.147 63.0 411160.0 25 0 51812.0 + 10271 FQVSTLDAAL 10 62 532.7835118569374 1063.5524707806746 2 532.7833129763603 MULTI CID FTMS 0 0 0 18612 256762.453125 0.7151221858769696 1 -0.1081771850585937 15 Unmodified _FQVSTLDAAL_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 9.38312468134398 0.6832340498775793 3 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F} 3 8 15.986 0.0 0.0 1.5031 0.0 0.0 0.0 686.3333295055371 686.3333295055371 0.4128006923421186 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F} 1.5031 - 32 1 1.217 29309.4 1.0 12854 5771 18612 HBL1_DMSO_200M_050219_1,18627 HBL1_DMSO_200M_050219_1,18627,FQVSTLDAAL False True FQVSTLDAAL 89.147016 532.78331297636 1680508.625 18612.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 2.3045427799224854 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18628 89.151 230.0 908160.0 25 0 76112.0 + 15865 KQVDEFLASI 10 144 575.3113374580169 1148.6081219828336 2 575.3116332888603 MULTI CID FTMS 0 0 0 18612 229037.015625 0.4780826257836404 3 -0.2901077270507812 16 Unmodified _ISNYPLSAALT_ ENST00000510672.1_1_5:102520366-102526739:+|nuORF;ENSG00000145725|ENST00000358359|PPIP5K2;nc|ENSG00000145725|O43314-2|PPIP5K2 32.78568957990786 0.3235288296534633 3 {[QS]|[NT]}MPR{M(Oxidation (M))|F}{I|L}A{[TV]|[{I|L}S]} 10 7 + 52.025 0.0 0.0 4.5294 4.5294 76.334 0.0 0.0 0.0 3.2415690999338693 5.764837301042718 3.2415690999338693 3.2415690999338693 0 0.3054621874040891 1.3010299956639813 0.6462566630072955 0.4090970050269639 {[QS]|[NT]}MPR{M(Oxidation (M))|F}{I|L}A{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}NTR{M(Oxidation (M))|F}{I|L}A{[TV]|[{I|L}S]};{[QS]|[NT]}MP{I|L}[R{M(Oxidation (M))|F}]A{[TV]|[{I|L}S]};{[QS]|[NT]}{I|L}MP[R{M(Oxidation (M))|F}]A{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}NT{I|L}[R{M(Oxidation (M))|F}]A{[TV]|[{I|L}S]};{[QS]|[NT]}{I|L}M{[WT]|[RM]}{I|L}A{[TV]|[{I|L}S]};{[QS]|[NT]}[YV]P[TA]{I|L}A{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}GGTR{M(Oxidation (M))|F}{I|L}A{[TV]|[{I|L}S]};{[QS]|[NT]}{I|L}[RD]{M(Oxidation (M))|F}{I|L}A{[TV]|[{I|L}S]};{[QS]|[NT]}M{I|L}P[R{M(Oxidation (M))|F}]A{[TV]|[{I|L}S]} 4.5294;4.2471;4.0929;4.0722;3.8107;3.7469;3.6932;3.4493;3.3533;3.2567 -;-;-;-;-;-;-;-;-;- 1501 1 1.217 162837.4 1.0 12855 5771 18612 HBL1_DMSO_200M_050219_1,18628 HBL1_DMSO_200M_050219_1,18628,ISNYPLSAALT False False KQVDEFLASI 89.15136 575.31163328886 4743110.0 18612.0 ENST00000510672.1_1_5:102520366-102526739:+|nuORF;;ENSG00000145725|ENST00000358359|PPIP5K2;;nc|ENSG00000145725|O43314-2|PPIP5K2 0.4660579661528269 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18629 89.166 800.0 411650.0 25 0 71682.0 + 3193 AVVSVGIVIV 10 241 478.3132302034176 954.6119074736353 2 478.3128539919853 MULTI CID FTMS 0 0 0 18612 202847.578125 0.3782771111060087 3 -0.2901077270507812 17 Unmodified _AVVSVGIVIV_ ENST00000396953.6_2_3:12882746-12883025:-|nuORF 46.020951573049366 0.1035046897853725 3 [VG]S{I|L}V{I|L}GV{I|L}V 10 5 + 50.844 0.0 0.0 5.3261 5.3261 86.447 0.0 0.0 0.0 12.449273188771386 6.580758529268849 6.580758529268849 9.827796776480469 0 0.9929928190999392 1.6989700043360187 0.9802046884880938 0.0 [VG]S{I|L}V{I|L}GV{I|L}V;[VG]SV{I|L}{I|L}GV{I|L}V;{[VA]|[{I|L}G]}VSV{I|L}GV{I|L}V;[VG]S{I|L}V[VG]{I|L}{I|L}V;[{I|L}A][TA]V{I|L}GV{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}KV{I|L}GV{I|L}V;[VG]{I|L}VS{I|L}GV{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V{I|L}GV{I|L}V;{[TV]|[{I|L}S]}[VG]V{I|L}GV{I|L}V;[{I|L}A]GT{I|L}{I|L}GV{I|L}V 5.3261;4.2966;4.022;3.8617;3.8597;3.6108;3.5997;3.3859;3.1083;2.9796 -;-;-;-;-;-;-;-;-;- 2715 1 1.217 243151.0 1.0 12856 5771 18612 HBL1_DMSO_200M_050219_1,18629 HBL1_DMSO_200M_050219_1,18629,AVVSVGIVIV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18630 89.171 247.0 682480.0 25 0 62523.0 + 10027 FPMGDRLYI 9 140 556.283367930682 1110.5521829281638 2 556.2844726443291 MULTI CID FTMS 0 0 0 18612 164963.484375 0.907679247656212 -2 0.1877288818359375 18 Unmodified _FPMGDRLYI_ ENSG00000277791|ENST00000619426|PSMB3 27.628801355627647 0.1796483985696185 3 {I|L}{I|L}{I|L}V[C(Carbamidomethyl (C))H]MPE 9 9 + 57.157 0.0 0.0 5.1468 5.1468 80.271 0.0 0.0 0.0 9.030899869919438 16.478174818886373 9.030899869919438 4.771212547196626 0 0.3054621874040891 1.5228787452803376 0.0 0.0 {I|L}{I|L}{I|L}V[C(Carbamidomethyl (C))H]MPE;{I|L}{I|L}V{I|L}[C(Carbamidomethyl (C))H]MPE;[{I|L}V]{I|L}{I|L}[C(Carbamidomethyl (C))H]MPE;{NN|[MP]|[D{I|L}]|[EV]}K[PG]PKMPE;{M(Oxidation (M))|F}PMKPA[NG]H{I|L};{M(Oxidation (M))|F}PMGD[R{I|L}]Y{I|L};{[VA]|[{I|L}G]}W[PG]PKMPE;{M(Oxidation (M))|F}PMKPA[HN]G{I|L};[{I|L}P]{[WN]|[YH]}PKMPE;{[QD]|[EN]|[WG]|[KD]|[RS]}PVAPKMPE 5.1468;4.7171;4.3336;3.2987;3.2794;3.2333;3.1862;3.0284;2.9432;2.8455 -;-;-;-;-;+;-;-;-;- + 789 1 1.217 135528.5 1.0 12857 5771 18612 HBL1_DMSO_200M_050219_1,18630 HBL1_DMSO_200M_050219_1,18630,FPMGDRLYI False True FPMGDRLYI 89.170958 556.284472644329 2919473.75 18612.0 ENSG00000277791|ENST00000619426|PSMB3 4.099269072214763 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18631 89.183 720.0 93954.0 25 0 7789.0 -1 0 102 739.375552085741 2215.1048268574227 3 739.3769409060478 MULTI CID FTMS 0 0 0 18612 143840.953125 1.0 0 0.0 19 3 [MN]P 3 -1 30.7 0.0 0.0 1.3859 0.0 0.0 0.0 1869.9429637072249 1869.9429637072249 23.7101498947667 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 [MN]P 1.3859 - 181 + 1 1.217 57678.1 1.0 12858 5771 18612 HBL1_DMSO_200M_050219_1,18631 HBL1_DMSO_200M_050219_1,18631, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18632 89.196 719.0 224040.0 25 0 19861.0 + 39678 VEEKLYDFK 9 172 585.80501125263 1169.59546957206 2 585.8062621951103 MULTI CID FTMS 0 0 0 18612 149431.59375 0.1135708141776939 6 -0.5974502563476562 20 Unmodified _VEEKLYDFK_ REV__ENSG00000101247|ENST00000378106|NDUFAF5;REV__ENST00000481249.5_1_20:13765843-13779121:+|nuORF;REV__ENST00000485738.5_1_20:13765717-13782219:+|nuORF;REV__nc|ENSG00000101247|Q5TEU4-2|NDUFAF5 22.736283301280096 0.2418982879461534 3 {[QN]|[E{I|L}]|[KN]}D{I|L}K{I|L}QAC(Carbamidomethyl (C)) 9 -1 53.805 0.0 0.0 4.6003 0.0 0.0 0.0 96.04393083598498 96.04393083598498 20.338593126403843 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.537860356969059 0.0 {[QN]|[E{I|L}]|[KN]}D{I|L}K{I|L}QAC(Carbamidomethyl (C)) 4.6003 - 7433 1 1.217 122398.9 1.0 12859 5771 18612 HBL1_DMSO_200M_050219_1,18632 HBL1_DMSO_200M_050219_1,18632,VEEKLYDFK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18634 89.2 29.0 1084400.0 25 0 231940.0 -1 MLEPHSCQYI 10 60 647.285216516121 1292.5558800990418 2 647.2857543826103 MULTI CID FTMS 0 0 0 18633 1346609.625 0.718326941241879 1 -0.1316375732421875 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LEPHSC(Carbamidomethyl (C))QYI_ ENSG00000068912|ENST00000185150|ERLEC1;nc|ENSG00000068912|Q96DZ1-2|ERLEC1;nc|ENSG00000068912|Q96DZ1-3|ERLEC1 20.453626601364224 0.5043500229302764 3 QY{M(Oxidation (M))|F}Q[Y{I|L}] 6 -1 29.882 0.0 0.0 2.3119 0.0 0.0 432.15059096504064 0.0 432.15059096504064 0.0 15.902887499330731 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 QY{M(Oxidation (M))|F}Q[Y{I|L}] 2.3119 - 157 1 1.217 31108.6 1.0 12860 5772 18633 HBL1_DMSO_200M_050219_1,18634 HBL1_DMSO_200M_050219_1,18634,MLEPHSCQYI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18635 89.202 91.0 594390.0 25 0 89548.0 + 21462 LPHLVVSI 8 74 439.2787278575557 876.5429027819115 2 439.2788268923759 MULTI CID FTMS 0 0 0 18633 1504150.0 0.6019302666897437 2 -0.1819305419921875 2 Unmodified _LPHLVVSI_ ENSG00000119285|ENST00000366582|HEATR1 38.99230528602208 0.2511498934509823 3 [H{I|L}]P{I|L}VVS{I|L} 8 2 + 50.578 0.0 0.0 5.7702 5.7702 79.965 0.0 0.0 0.0 11.883957647232265 8.667053245199625 8.667053245199625 3.0102999566398125 0 0.8182503180159344 1.3010299956639813 0.0 0.0 [H{I|L}]P{I|L}VVS{I|L};[H{I|L}]PV{I|L}VS{I|L};[H{I|L}]VP{I|L}VS{I|L};[H{I|L}]PVV{I|L}S{I|L};[H{I|L}]VPV{I|L}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}VVS{I|L};[{I|L}P]H{I|L}VVS{I|L};[H{I|L}]VVP{I|L}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}VS{I|L};[{I|L}P]HV{I|L}VS{I|L} 5.7702;5.4268;5.0833;4.8824;4.539;4.4144;4.2761;4.1956;4.071;3.9327 -;-;-;-;-;-;+;-;-;- + 188 1 1.217 48885.9 1.0 12861 5772 18633 HBL1_DMSO_200M_050219_1,18635 HBL1_DMSO_200M_050219_1,18635,LPHLVVSI False True LPHLVVSI 89.20241 439.278826892376 66623508.0 18633.0 ENSG00000119285|ENST00000366582|HEATR1 2.568357308705648 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18636 89.204 18.0 4067500.0 25 0 532520.0 + 29736 QPMNKFLLV 9 104 545.3093551188538 1088.6041573045077 2 545.3098632693291 MULTI CID FTMS 0 0 0 18633 2482723.75 0.592385460842406 1 -0.1316375732421875 3 Unmodified _QPMNKFLLV_ chr19:38596483-38597034|48|26.69|0.32|6.37|-|0|None,MAP4K1|1;ENSG00000104814|ENST00000396857|MAP4K1;ENST00000588938.1_1_19:39086232-39087718:-|nuORF;nc|ENSG00000104814|Q92918|MAP4K1 23.1484247019978 0.2366544122328345 3 {I|L}{M(Oxidation (M))|F}KNM 5 7 22.964 0.0 0.0 2.1095 0.0 0.0 247.18756030196732 205.06215845279533 452.24971875476274 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 {I|L}{M(Oxidation (M))|F}KNM 2.1095 - 345 + 1 1.217 59203.8 1.0 12862 5772 18633 HBL1_DMSO_200M_050219_1,18636 HBL1_DMSO_200M_050219_1,18636,QPMNKFLLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18637 89.209 306.0 334670.0 25 0 12436.0 -1 0 110 628.9214384110145 3139.570809722072 5 629.1218749880791 MULTI CID FTMS 0 0 0 18633 884978.0 1.0 0 0.0 4 3 {M(Oxidation (M))|F}EEA{I|L}SA{I|L}SD[H{I|L}]A[HK] 15 -1 67.406 0.0 0.0 2.147 0.0 0.0 1472.7720945204658 0.0 1472.7720945204658 0.0 39.96408121623091 0.0 0.0 0 0.9247425010840048 0.0 1.610924374808178 0.4247425010840047 {M(Oxidation (M))|F}EEA{I|L}SA{I|L}SD[H{I|L}]A[HK] 2.147 - 2645 + 1 1.217 83685.1 1.0 12863 5772 18633 HBL1_DMSO_200M_050219_1,18637 HBL1_DMSO_200M_050219_1,18637, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18638 89.213 212.0 559850.0 25 0 92553.0 + 3001 AVIPRLVQL 9 110 504.83188664626135 1007.6492203593228 2 504.8319579958916 MULTI CID FTMS 0 0 0 18633 612105.1875 0.0113798650323378 10 -1.06219482421875 5 Unmodified _AVIPRLVQL_ ENSG00000173801|ENST00000393931|JUP;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 64.23631603340823 0.0237365939569086 3 {[VA]|[{I|L}G]}{I|L}PVVAVQ 9 4 37.679 0.0 0.0 3.7393 0.0 0.0 0.0 128.07491550996647 128.07491550996647 22.98606762693608 0.0 0.0 0.0 0 1.837180496500464 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}PVVAVQ 3.7393 - 283 1 1.217 93272.7 1.0 12864 5772 18633 HBL1_DMSO_200M_050219_1,18638 HBL1_DMSO_200M_050219_1,18638,AVIPRLVQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18639 89.215 48.0 2020500.0 25 0 153560.0 -1 MPVMNLAVF 9 106 519.2603968381255 1036.506240743051 2 519.2600585818291 MULTI CID FTMS 0 0 0 18633 612780.375 0.8075432529827542 1 -0.1316375732421875 6 Oxidation (M) _MPVM(Oxidation (M))NLAVF_ ENST00000540918.2_1_18:21710325-21710370:+|nuORF 16.942295170755138 0.3780752226737986 3 MPV{I|L}{I|L} 5 -1 56.462 0.0 0.0 5.4473 0.0 0.0 0.0 480.1542147272094 480.1542147272094 31.400428750804217 0.0 0.0 0.0 0 0.75 1.5228787452803376 0.0 0.0 MPV{I|L}{I|L} 5.4473 - 184 + 1 1.217 81230.8 1.0 12865 5772 18633 HBL1_DMSO_200M_050219_1,18639 HBL1_DMSO_200M_050219_1,18639,MPVMNLAVF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18640 89.223 483.0 282690.0 25 0 25545.0 + 2290 AQIDELKLQL 10 174 585.8401934511965 1169.6658339691928 2 585.8402587771416 MULTI CID FTMS 0 0 0 18633 432406.25 1.0 0 0.0 7 Unmodified _AQIDELKLQL_ ENSG00000133026|ENST00000360416|MYH10;ENST00000465458.1_1_17:8409499-8413222:-|nuORF;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580|MYH10 100.0907132914201 0.0086105052902417 3 [QA]{I|L}DE{I|L}K{I|L}Q{I|L} 10 0 + 84.062 0.0 0.0 7.1868 7.1868 93.146 0.0 0.0 0.0 19.30366586357336 10.52887198244136 10.52887198244136 13.397925512165102 0 1.6237125054200234 0.8538719643217619 1.0387254899964358 1.2346368802282015 + + [QA]{I|L}DE{I|L}K{I|L}Q{I|L};[QA]{I|L}DE{I|L}K{I|L}AG{I|L};[QA]{I|L}DE{I|L}KQ{I|L}{I|L};[QA]{I|L}DE{I|L}K{I|L}AAV;{[QN]|[E{I|L}]|[KN]}DK{I|L}{I|L}QA[Q{I|L}];{[QN]|[E{I|L}]|[KN]}D{I|L}K{I|L}QA[Q{I|L}];[QA]{I|L}DE{I|L}K[AG]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}DK{I|L}{I|L}Q{I|L}[QA];{[QN]|[E{I|L}]|[KN]}D{I|L}K{I|L}Q{I|L}[QA];{NN|[MP]|[D{I|L}]|[EV]}EK{I|L}{I|L}QA[Q{I|L}] 7.1868;6.0414;6.022;5.4084;5.0494;5.0031;4.9773;4.7092;4.6629;4.5048 +;-;-;-;-;-;-;-;-;- + 5590 + 1 1.217 105289.8 1.0 12866 5772 18633 HBL1_DMSO_200M_050219_1,18640 HBL1_DMSO_200M_050219_1,18640,AQIDELKLQL True True AQIDELKLQL 89.223049 585.840258777142 5928692.5 18633.0 nc|ENSG00000133026|P35580-3|MYH10;;nc|ENSG00000133026|P35580-5|MYH10;;nc|ENSG00000133026|P35580-2|MYH10;;nc|ENSG00000133026|P35580|MYH10;;ENSG00000133026|ENST00000360416|MYH10;;ENST00000465458.1_1_17:8409499-8413222:-|nuORF 4.970126787821452 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18641 89.232 483.0 291240.0 25 0 38637.0 -1 FSFMSLDCLV 10 148 589.2668806262473 1176.5192083192944 2 589.2667724490166 MULTI CID FTMS 0 0 0 18633 429225.78125 0.8108269331102056 2 -0.1819305419921875 8 Oxidation (M) _FSFM(Oxidation (M))SLDCLV_ ENSG00000169896|ENST00000544665|ITGAM;nc|ENSG00000169896|P11215-2|ITGAM 14.838274106304384 0.5985701837916485 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YV[YR]M[DP] 9 -1 + 47.668 0.0 0.0 4.0516 4.0516 75.7 0.0 0.0 0.0 0.7673754207020096 24.99481148192107 0.7673754207020096 3.8772686722014527 0 0.9247425010840048 2.0 0.1307196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YV[YR]M[DP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVVE[CS]M{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVVE{[MS]|[{M(Oxidation (M))|F}A]}C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VY[YR]M[DP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[MS]|[{M(Oxidation (M))|F}A]}EVVYDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVVE{[MS]|[{M(Oxidation (M))|F}A]}{I|L}C;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVVE[CS]P{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVVE[MT]CV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VY[WP]YC{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[WP]YVDT 4.0516;3.722;3.6992;3.5399;3.5166;3.4645;3.2776;3.2002;3.1029;2.9202 -;-;-;-;-;-;-;-;-;- 1637 1 1.217 109359.2 1.0 12867 5772 18633 HBL1_DMSO_200M_050219_1,18641 HBL1_DMSO_200M_050219_1,18641,FSFMSLDCLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18642 89.241 508.0 164890.0 25 0 12547.0 -1 0 101 785.8999760278122 3139.5707982448484 4 786.4025756716728 MULTI CID FTMS 0 0 0 18633 409886.90625 1.0 0 0.0 9 3 {M(Oxidation (M))|F}EEA{I|L}SA{I|L}SD{I|L}HA[HK] 15 -1 77.133 0.0 0.0 2.4568 0.0 0.0 1472.77240046175 0.0 1472.77240046175 0.0 72.5287409179711 0.0 0.0 0 0.5 0.0 0.6549471895720985 0.0 {M(Oxidation (M))|F}EEA{I|L}SA{I|L}SD{I|L}HA[HK] 2.4568 - 850 + 1 1.217 64723.8 1.0 12868 5772 18633 HBL1_DMSO_200M_050219_1,18642 HBL1_DMSO_200M_050219_1,18642, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18643 89.243 122.0 525200.0 25 0 89666.0 + 20260 LLDPSVFHV 9 96 513.7835842815323 1025.5526156298645 2 514.2841674685478 MULTI CID FTMS 0 0 0 18633 387339.71875 0.4432576713163134 2 -0.1819305419921875 10 Unmodified _LLDPSVFHV_ ENSG00000184967|ENST00000330579|NOC4L;ENST00000538784.2_1_12:132635515-132636943:+|nuORF 28.486842064014134 0.1687311288560894 3 {I|L}{I|L}DP[VS]{M(Oxidation (M))|F}HV 9 0 + 51.508 0.0 0.0 5.0224 5.0224 86.334 0.0 0.0 0.0 29.367682419613587 8.26397541348014 8.26397541348014 13.46787486224656 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}{I|L}DP[VS]{M(Oxidation (M))|F}HV;{I|L}{I|L}DM[W{I|L}]HV;{I|L}{I|L}DP[H{I|L}][YR];{I|L}{I|L}DP{[QC]|[C(Carbamidomethyl (C))A]}[KP]{I|L};{I|L}{I|L}DPHH[VP]V;{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[QA]QHV;{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}M[YR];[KA]AAP[VS]{M(Oxidation (M))|F}HV;{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[RE]|[WV]}HV;[QA]{I|L}M{[TV]|[{I|L}S]}QHV 5.0224;3.7092;3.6948;3.2742;2.6636;2.0212;1.9349;1.8809;1.683;1.484 +;-;-;-;-;-;-;-;-;- + 535 + 1 1.217 55170.1 1.0 12869 5772 18633 HBL1_DMSO_200M_050219_1,18643 HBL1_DMSO_200M_050219_1,18643,LLDPSVFHV False True LLDPSVFHV 89.243109 514.284167468548 6118792.5 18633.0 ENSG00000184967|ENST00000330579|NOC4L;;ENST00000538784.2_1_12:132635515-132636943:+|nuORF 7.479862213134766 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18644 89.248 243.0 449870.0 25 0 56825.0 + 8890 FAFESDLHSL 10 124 583.2801529681332 1164.5457530030662 2 583.2803832888603 MULTI CID FTMS 0 0 0 18633 346326.59375 0.2084967450847415 4 -0.4063491821289062 11 Unmodified _FAFESDLHSL_ ENSG00000117399|ENST00000310955|CDC20;ENST00000488829.1_1_9:89626569-89628063:+|nuORF 78.14939416004806 0.0185844602684931 3 A{M(Oxidation (M))|F}DS{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AE 9 7 61.469 0.0 0.0 5.2784 0.0 0.0 119.07378585029451 0.0 119.07378585029451 0.0 29.11396433394203 0.0 0.0 0 0.6861818737241735 0.0 0.805462187404089 0.0 A{M(Oxidation (M))|F}DS{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AE 5.2784 - 3159 1 1.217 83914.2 1.0 12870 5772 18633 HBL1_DMSO_200M_050219_1,18644 HBL1_DMSO_200M_050219_1,18644,FAFESDLHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18645 89.258 607.0 124440.0 25 0 17981.0 -1 0 87 1023.512473779443 3067.515591938529 3 1024.182543933392 MULTI CID FTMS 0 0 0 18633 262583.34375 1.0 0 0.0 12 3 {I|L}VM[HA] 5 -1 22.218 0.0 0.0 0.72432 0.0 0.0 2498.1831397648293 0.0 2498.1831397648293 0.0 4.338162265355404 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VM[HA] 0.72432 - 455 1 1.217 56923.6 1.0 12871 5772 18633 HBL1_DMSO_200M_050219_1,18645 HBL1_DMSO_200M_050219_1,18645, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18646 89.27 622.0 112820.0 25 0 34791.0 + 16921 KIKRLYLKYFF 11 84 759.9633498689514 1517.9121468047026 2 759.9634277224541 MULTI CID FTMS 0 0 0 18633 252997.0 1.0 0 0.0 13 Unmodified _KIKRLYLKYFF_ ENST00000274140.9_1_5:10437274-10437493:+|nuORF 0.0 0.8751479354844584 3 G 1 11 1.9897 0.0 0.0 0.13108 0.0 0.0 1235.7444049607557 222.1247957818969 1457.8692007426523 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.13108 - 32 + 1 1.217 63811.1 1.0 12872 5772 18633 HBL1_DMSO_200M_050219_1,18646 HBL1_DMSO_200M_050219_1,18646,KIKRLYLKYFF False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18647 89.276 338.0 391870.0 25 0 39868.0 + 32495 SALELHVPI 9 144 489.78551948036784 977.5564860275356 2 489.7854186892509 MULTI CID FTMS 0 0 0 18633 255381.390625 1.0 0 0.0 14 Unmodified _SALELHVPI_ REV__ENSG00000159322|ENST00000456471|ADPGK;REV__ENST00000562621.1_1_15:73044684-73048205:-|nuORF;REV__ENST00000567941.5_1_15:73044684-73075795:-|nuORF;REV__ENST00000569534.5_1_15:73044684-73076051:-|nuORF;REV__nc|ENSG00000159322|Q9BRR6-2|ADPGK;REV__nc|ENSG00000159322|Q9BRR6-3|ADPGK;REV__nc|ENSG00000159322|Q9BRR6-4|ADPGK;REV__nc|ENSG00000159322|Q9BRR6-5|ADPGK 24.67388899826682 0.2172451872415813 3 {[QN]|[E{I|L}]|[KN]}H{I|L}AS{I|L}PV 9 -1 + 44.92 0.0 0.0 4.5951 4.5951 76.472 0.0 0.0 0.0 7.879525069454253 7.879525069454253 7.879525069454253 3.187587626244131 0 1.0397644799392252 2.0 0.3252574989159953 0.0 {[QN]|[E{I|L}]|[KN]}H{I|L}AS{I|L}PV;{[QN]|[E{I|L}]|[KN]}H{[SA]|[TG]}{I|L}{I|L}PV;[{I|L}T]{I|L}SA{I|L}{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}HEPK{I|L};[{I|L}T]{I|L}{I|L}{[SA]|[TG]}{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}H{I|L}{I|L}{[SA]|[TG]}PV;[{I|L}T]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PK{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}K{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}[YN]T{I|L};[{I|L}T]{I|L}SA{M(Oxidation (M))|F}T{I|L}{I|L} 4.5951;4.269;3.7891;3.6053;3.463;3.3204;3.1069;2.7917;2.7683;2.6251 -;-;-;-;-;-;-;-;-;- 532 1 1.217 100558.9 1.0 12873 5772 18633 HBL1_DMSO_200M_050219_1,18647 HBL1_DMSO_200M_050219_1,18647,SALELHVPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18648 89.289 728.0 230460.0 25 0 34707.0 + 30692 RFQDLIREL 9 178 595.3378339754025 1188.661115017605 2 595.3375732302666 MULTI CID FTMS 0 0 0 18633 214174.75 0.4556207058233508 2 -0.1819305419921875 15 Unmodified _RFQDLIREL_ ENSG00000198265|ENST00000358691|HELZ 40.72490554402381 0.0714771638475563 3 {I|L}{M(Oxidation (M))|F}R{I|L}{I|L}DYH{I|L} 9 6 + 68.444 0.0 0.0 5.758 5.758 89.528 0.0 0.0 0.0 56.22515503637926 10.602802969692746 10.602802969692746 17.26280941356464 0 1.5317183090963749 0.0 0.0 0.805462187404089 {I|L}{M(Oxidation (M))|F}R{I|L}{I|L}DYH{I|L};{I|L}{M(Oxidation (M))|F}[VG]{I|L}{I|L}DYH{I|L};{I|L}{M(Oxidation (M))|F}R{I|L}{I|L}{M(Oxidation (M))|F}{[NV]|[RG]}AP;{I|L}{M(Oxidation (M))|F}R{I|L}{I|L}{M(Oxidation (M))|F}{[QG]|[NA]}PV;{I|L}{M(Oxidation (M))|F}R{I|L}{I|L}{M(Oxidation (M))|F}{[QG]|[NA]}VP;[VG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}DYH{I|L};{I|L}{M(Oxidation (M))|F}R{I|L}{I|L}[PS][SG]S{I|L};{I|L}{M(Oxidation (M))|F}R{I|L}{I|L}[PS][SG]TV;{I|L}{M(Oxidation (M))|F}[VG]{I|L}{I|L}{M(Oxidation (M))|F}{[NV]|[RG]}AP;{I|L}{M(Oxidation (M))|F}[VG]{I|L}{I|L}{M(Oxidation (M))|F}{[QG]|[NA]}PV 5.758;4.3058;4.182;4.1629;3.9672;3.8028;3.7766;3.4183;3.411;3.3919 -;-;-;-;-;-;-;-;-;- 692 + 1 1.217 126627.9 1.0 12874 5772 18633 HBL1_DMSO_200M_050219_1,18648 HBL1_DMSO_200M_050219_1,18648,RFQDLIREL True True RFQDLIREL 89.289134 595.337573230267 11622089.0 18633.0 ENSG00000198265|ENST00000358691|HELZ 5.912613232930501 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18649 89.295 315.0 395880.0 25 0 24861.0 + -1 GVILSSMHNII 11 158 600.3288980106817 1198.6432430881632 2 600.8281127810478 MULTI CID FTMS 0 0 0 18633 196212.78125 0.8477359098772204 2 -0.1819305419921875 16 Oxidation (M) _GVILSSM(Oxidation (M))HNII_ REV__ENSG00000197057|ENST00000639862|DTHD1;REV__nc|ENSG00000197057|Q6ZMT9-2|DTHD1;REV__nc|ENSG00000197057|Q6ZMT9|DTHD1 19.256988751693697 0.6345794173041263 3 [VG]{I|L}{I|L}VME{I|L}YY 10 -1 + 25.318 0.0 0.0 2.1122 2.1122 75.848 0.0 0.0 0.0 8.16083403432362 2.2969624387961503 2.2969624387961503 7.780769382499884 0 0.0 1.154901959985743 0.0 0.0 [VG]{I|L}{I|L}VME{I|L}YY;[VG]{I|L}SE[KQ]{I|L}YY;[VG]{I|L}{I|L}C[KQ]{I|L}YY;VVA{I|L}VME{I|L}YY;[VG]{I|L}SE{M(Oxidation (M))|F}[HA]Q[{I|L}V];[VG]{I|L}{I|L}C{M(Oxidation (M))|F}[HA]Q[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}KE[KQ]{I|L}YY;{NN|[MP]|[D{I|L}]|[EV]}KE{M(Oxidation (M))|F}[HA]Q[{I|L}V];VVASE[KQ]{I|L}YY;VVA{I|L}C[KQ]{I|L}YY 2.1122;1.4631;1.4482;1.4313;1.2582;1.2434;1.1013;0.89279;0.78221;0.76736 -;-;-;-;-;-;-;-;-;- 3495 1 1.217 89518.6 1.0 12875 5772 18633 HBL1_DMSO_200M_050219_1,18649 HBL1_DMSO_200M_050219_1,18649,GVILSSMHNII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18650 89.302 313.0 393210.0 25 0 45333.0 + 28586 PTVPELTL 8 125 435.2525437444794 868.4905345557588 2 435.2519409060478 MULTI CID FTMS 0 0 0 18633 173950.375 0.4444990999279958 -5 0.4575042724609375 17 Unmodified _PTVPELTL_ REV__ENSG00000170085|ENST00000429602|SIMC1;REV__nc|ENSG00000170085|Q8NDZ2|SIMC1 46.92087301778293 0.1537303740847981 3 [{I|L}P]S[{I|L}T]PE{I|L} 8 -1 + 28.95 0.0 0.0 3.3334 3.3334 75.351 0.0 0.0 0.0 7.737642882298914 5.039237471316291 5.039237471316291 5.039237471316291 0 0.2742275032520141 1.3979400086720375 0.7614393726401688 0.0 [{I|L}P]S[{I|L}T]PE{I|L};[{I|L}P]SP{[QN]|[E{I|L}]|[KN]}T{I|L};[{I|L}P]SP[{I|L}T]E{I|L};[{I|L}T]S{I|L}PPE{I|L};{[TV]|[{I|L}S]}P[{I|L}T]PE{I|L};[TP]V[{I|L}T]PE{I|L};{[TV]|[{I|L}S]}T{I|L}PPE{I|L};{[TV]|[{I|L}S]}PP{[QN]|[E{I|L}]|[KN]}T{I|L};{[TV]|[{I|L}S]}PP[{I|L}T]E{I|L};[{I|L}P]PS{[QN]|[E{I|L}]|[KN]}T{I|L} 3.3334;2.7532;2.6614;2.4425;2.1576;1.9234;1.7838;1.5774;1.4856;1.4188 -;-;-;-;-;-;-;-;-;- 283 1 1.217 97577.5 1.0 12876 5772 18633 HBL1_DMSO_200M_050219_1,18650 HBL1_DMSO_200M_050219_1,18650,PTVPELTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18651 89.316 800.0 58583.0 25 0 10540.0 -1 0 48 1173.5014551419342 0 1173.841357409954 PEAK CID FTMS 0 0 0 18633 103244.0234375 1.0 0 0.0 18 3 HP 2 -1 10.969 0.0 0.0 0.46777 0.0 0.0 1171.445218778206 936.415658819006 2107.860877597212 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HP 0.46777 - 9 + 1 1.217 45171.1 0.6700000166893005 12877 5772 18633 HBL1_DMSO_200M_050219_1,18651 HBL1_DMSO_200M_050219_1,18651, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18652 89.319 178.0 453430.0 25 0 68248.0 + 42081 VQWENSFVSV 10 114 597.7928734328476 1193.5711939324951 2 597.7932006716728 MULTI CID FTMS 0 0 0 18633 151956.640625 0.213918511976344 -1 0.1081771850585937 19 Unmodified _VQWENSFVSV_ ENSG00000174231|ENST00000304992|PRPF8 55.50274090549119 0.048383292844968 3 [WE]QVNS{M(Oxidation (M))|F} 7 7 48.039 0.0 0.0 4.0248 0.0 0.0 0.0 300.15844914173266 300.15844914173266 16.74382550323958 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.2856668758921828 0.8494850021680094 [WE]QVNS{M(Oxidation (M))|F} 4.0248 - 1628 1 1.217 67020.3 1.0 12878 5772 18633 HBL1_DMSO_200M_050219_1,18652 HBL1_DMSO_200M_050219_1,18652,VQWENSFVSV True True VQWENSFVSV 89.319069 597.793200671673 4481454.5 18633.0 ENSG00000174231|ENST00000304992|PRPF8 6.399235089619954 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18653 89.328 486.0 196820.0 25 0 14782.0 -1 PFTLTSPCM 9 116 351.8306408553259 1052.4700931661778 3 351.8307983279228 MULTI CID FTMS 0 0 0 18633 138397.75 1.0 0 0.0 20 Carbamidomethyl (C) _PFTLTSPC(Carbamidomethyl (C))M_ ENST00000382496.9_1_5:9041648-9041792:-|nuORF 4.897010918128616 0.7437319958283661 3 M{I|L}TD 4 -1 35.745 0.0 0.0 3.3963 0.0 0.0 0.0 589.2457979791624 589.2457979791624 24.151603310239903 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 M{I|L}TD 3.3963 - 47 + 1 1.217 79437.9 1.0 12879 5772 18633 HBL1_DMSO_200M_050219_1,18653 HBL1_DMSO_200M_050219_1,18653,PFTLTSPCM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18655 89.332 4.7 13383000.0 25 0 1895000.0 + 9183 FGGVLILIHR 10 76 375.5692990116058 1123.6860676350177 3 375.5695068240166 MULTI CID FTMS 0 0 0 18654 9726152.0 0.2717586842949964 3 -0.2747116088867187 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 46.020951573049366 0.1035046897853725 3 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 [{I|L}V]{M(Oxidation (M))|F} + + 58.053 21.461 5.9743 5.1663 5.1663 56.197 0.0 0.0 0.0 0.0 35.076833818782944 0.0 0.0 0 0.3494850021680094 0.0 0.0 1.341129063296272 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 5.1663 - 116 + 1 1.225 57698.1 1.0 12880 5773 18654 HBL1_DMSO_200M_050219_1,18655 HBL1_DMSO_200M_050219_1,18655,FGGVLILIHR True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18656 89.333 2.5 22434000.0 25 0 1513000.0 + 25070 MPVIPMNTI 9 85 508.2690081828018 1014.5234634324036 2 508.2696105837822 MULTI CID FTMS 0 0 0 18654 23927858.0 0.9031627037186004 2 -0.1757659912109375 2 Unmodified _MPVIPMNTI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 74.39630413441286 0.0193995060682538 3 [VP]M{I|L}PMNT{I|L} 9 2 + 58.65 0.0 0.0 5.781 5.781 82.468 0.0 0.0 0.0 10.255310316373354 9.889917747712644 9.889917747712644 4.771212547196626 0 1.1237125054200234 1.154901959985743 0.0 0.0 [VP]M{I|L}PMNT{I|L};[VP]{I|L}MPMNT{I|L};[VP]M{I|L}PMGGT{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}PMNT{I|L};[VP]MP{I|L}MNT{I|L};[VP]{I|L}MPMGGT{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}PMGGT{I|L};[VP]MP{I|L}MGGT{I|L};{NN|[MP]|[D{I|L}]|[EV]}VP{I|L}MNT{I|L};{NN|[MP]|[D{I|L}]|[EV]}VP{I|L}MGGT{I|L} 5.781;5.3107;4.8734;4.7702;4.5464;4.4031;3.8625;3.6387;3.5355;2.6279 -;-;-;+;-;-;-;-;-;- + 280 1 1.225 46231.6 1.0 12881 5773 18654 HBL1_DMSO_200M_050219_1,18656 HBL1_DMSO_200M_050219_1,18656,MPVIPMNTI True True MPVIPMNTI 89.333223 508.269610583782 795354384.0 18654.0 nc|ENSG00000147162|O15294-3|OGT;;ENSG00000147162|ENST00000373719|OGT;;nc|ENSG00000147162|O15294-4|OGT;;nc|ENSG00000147162|O15294-2|OGT 7.176078637440999 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18657 89.334 15.0 3174600.0 25 0 286170.0 + 17280 KLQEFLQTL 9 78 560.325224747011 1118.635896560822 2 560.3254272341728 MULTI CID FTMS 0 0 0 18654 3076883.0 1.0 0 0.0 3 Unmodified _KLQEFLQTL_ ENSG00000140525|ENST00000310775|FANCI;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-4|FANCI 45.69961567697781 0.0497987121815769 3 [{I|L}T]QR{M(Oxidation (M))|F}{I|L}QT{I|L} 9 2 + 73.056 0.0 0.0 6.5308 6.5308 89.42 0.0 0.0 0.0 12.21848749616356 10.330145895351848 10.330145895351848 9.208187539523747 0 0.8182503180159344 1.3979400086720375 1.0994850021680094 0.8807196863200843 [{I|L}T]QR{M(Oxidation (M))|F}{I|L}QT{I|L};[{I|L}T]QR{M(Oxidation (M))|F}{I|L}[AG]T{I|L};[{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}QT{I|L};[Q{I|L}]TR{M(Oxidation (M))|F}{I|L}QT{I|L};[{I|L}T][AG]R{M(Oxidation (M))|F}{I|L}QT{I|L};[QT]{I|L}R{M(Oxidation (M))|F}{I|L}QT{I|L};[{I|L}T][CS]{I|L}K{I|L}QT{I|L};[{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}[AG]T{I|L};[Q{I|L}]TR{M(Oxidation (M))|F}{I|L}[AG]T{I|L};[Q{I|L}]T[VG]{M(Oxidation (M))|F}{I|L}QT{I|L} 6.5308;5.7077;5.7077;5.4386;5.2607;5.1058;4.9266;4.8884;4.6154;4.6154 -;-;-;-;-;-;-;-;-;- 358 1 1.225 41594.7 1.0 12882 5773 18654 HBL1_DMSO_200M_050219_1,18657 HBL1_DMSO_200M_050219_1,18657,KLQEFLQTL True True KLQEFLQTL 89.334402 560.325427234173 56551396.0 18654.0 nc|ENSG00000140525|Q9NVI1-1|FANCI;;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;;ENSG00000140525|ENST00000310775|FANCI;;nc|ENSG00000140525|Q9NVI1-4|FANCI;;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;;nc|ENSG00000140525|Q9NVI1-2|FANCI 5.43297290802002 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18658 89.336 23.0 3237500.0 25 0 352650.0 9189 FGGVLILIHR 10 73 562.8502122288387 1123.6858715244773 2 562.8506957888603 MULTI CID FTMS 0 0 0 18654 2554929.0 0.2846765444187417 2 -0.1757659912109375 4 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 3 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 112.0 0.0 0.0 9.9676 9.9676 94.99 0.0 0.0 0.0 98.49275660196687 17.587418566968154 17.587418566968154 9.208187539523747 0 1.566901560044258 2.0 0.0 0.7742275032520141 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 9.9676;9.1482 -;- 130 + 1 1.225 61345.0 1.0 12883 5773 18654 HBL1_DMSO_200M_050219_1,18658 HBL1_DMSO_200M_050219_1,18658,FGGVLILIHR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18659 89.337 22.0 2881100.0 25 0 217830.0 + 29867 QQVQRLPFL 9 93 564.8299374651045 1127.645321997009 2 564.8299438357353 MULTI CID FTMS 0 0 0 18654 2266394.25 0.4636668893558166 -4 0.4275436401367187 5 Unmodified _QQVQRLPFL_ ENSG00000132963|ENST00000380842|POMP 104.79918948944588 0.0084531067040494 3 QQVQR{I|L}P{M(Oxidation (M))|F}{I|L} 9 0 + 52.687 0.0 0.0 4.6723 4.6723 77.499 0.0 0.0 0.0 27.906075122407685 12.263261709428193 12.263261709428193 3.802112417116064 0 1.7104093769761874 0.0 0.0 0.0 + + QQVQR{I|L}P{M(Oxidation (M))|F}{I|L};QQVQR{I|L}{I|L}M{I|L};QQV[AG]R{I|L}P{M(Oxidation (M))|F}{I|L};[YV]{I|L}{I|L}RQ[HS]{I|L};QQV[AG]R{I|L}{I|L}M{I|L};[YV]{I|L}{I|L}RQV[HT];[YV]{I|L}{I|L}R[AG][HS]{I|L};[YV]{I|L}{I|L}R[AG]V[HT];[AG]R[HT]V{I|L}[YV]{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[HT]V{I|L}[YV]{I|L} 4.6723;4.3352;3.8558;3.5716;3.5186;3.1356;2.755;2.319;1.7298;0.9726 +;-;-;-;-;-;-;-;-;- + 527 + 1 1.225 54312.3 1.0 12884 5773 18654 HBL1_DMSO_200M_050219_1,18659 HBL1_DMSO_200M_050219_1,18659,QQVQRLPFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18660 89.338 22.0 2983900.0 25 0 319880.0 10022 FPLTAAQKIA 10 81 530.3135998751043 1058.6126468170085 2 530.3140746951103 MULTI CID FTMS 0 0 0 18654 1633896.625 0.8268876048715061 -1 0.1316375732421875 6 Unmodified _FPLTAAQKIA_ ENST00000497389.6_1_10:46918355-46938364:+|nuORF 26.268140514670165 0.3785003716575977 3 AT{I|L}PE 5 9 46.81 0.0 0.0 4.4219 0.0 0.0 529.3192005841812 0.0 529.3192005841812 0.0 24.872118693881543 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 AT{I|L}PE 4.4219 - 54 1 1.225 55662.7 1.0 12885 5773 18654 HBL1_DMSO_200M_050219_1,18660 HBL1_DMSO_200M_050219_1,18660,FPLTAAQKIA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18661 89.339 41.0 1223700.0 25 0 88766.0 + 6294 DVDQQTFNHQL 11 79 672.8106228912221 1343.6066928492442 2 672.8108398318291 MULTI CID FTMS 0 0 0 18654 1187761.75 0.6945585218607611 -1 0.1316375732421875 7 Unmodified _DVDQQTFNHQL_ REV__ENSG00000164946|ENST00000380880|FREM1;REV__nc|ENSG00000164946|Q5H8C1-2|FREM1 12.240655878213236 0.7805268987462184 3 [DV]EPVAGA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WQ] 12 -1 + 35.371 0.0 0.0 2.6326 2.6326 68.092 0.0 0.0 0.0 6.320232147054057 4.71726222832956 4.71726222832956 1.0914446942506828 0 0.0 1.3979400086720375 0.0 0.0 [DV]EPVAGA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WQ];[DV]PEVAGA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WQ];[DV]EPVQA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WQ];[DV]EPAVGA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WQ];[DV]PEVQA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WQ];[DV]PEAVGA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WQ];[DP]{I|L}DVAGA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WQ];[DV]EPVAQ{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WQ];[VP]EDVAGA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WQ];[DV]PEVAQ{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WQ] 2.6326;2.5513;2.3645;2.3364;2.2833;2.2552;2.1622;2.1405;2.0692;2.0592 -;-;-;-;-;-;-;-;-;- 916 1 1.225 42201.6 1.0 12886 5773 18654 HBL1_DMSO_200M_050219_1,18661 HBL1_DMSO_200M_050219_1,18661,DVDQQTFNHQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18662 89.341 65.0 1010200.0 25 0 166550.0 + 33241 SFPAPSLAL 9 81 451.75254133747273 901.4905297417456 2 451.7526428103447 MULTI CID FTMS 0 0 0 18654 1099803.375 0.0471376532258334 42 -4.478492736816406 8 Unmodified _SFPAPSLAL_ REV__ENST00000380191.8_1_10:5855216-5855492:-|nuORF 34.10243960390752 0.1078313939113124 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 -1 50.718 0.0 0.0 5.626 0.0 0.0 0.0 199.1096896820944 199.1096896820944 31.777807052660805 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 5.626 - 270 1 1.225 59576.1 1.0 12887 5773 18654 HBL1_DMSO_200M_050219_1,18662 HBL1_DMSO_200M_050219_1,18662,SFPAPSLAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18663 89.342 39.0 1061000.0 25 0 127400.0 + 14696 IIVDEAICSM 10 76 547.266353952815 1092.51815497243 2 547.2673217654228 MULTI CID FTMS 0 0 0 18654 855351.125 0.151648374979035 4 -0.357635498046875 9 Unmodified _IIVDEAICSM_ REV__ENSG00000181789|ENST00000314797|COPG1 19.256988751693697 0.5244284437930726 3 [TP]D{I|L}T{I|L}{I|L} 7 -1 49.191 0.0 0.0 4.5025 0.0 0.0 0.0 336.06817873635504 336.06817873635504 33.70637891135594 0.0 0.0 0.0 0 0.8494850021680094 1.0457574905606752 0.805462187404089 0.0 [TP]D{I|L}T{I|L}{I|L} 4.5025 - 195 1 1.225 43070.4 1.0 12888 5773 18654 HBL1_DMSO_200M_050219_1,18663 HBL1_DMSO_200M_050219_1,18663,IIVDEAICSM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18664 89.343 67.0 799940.0 25 0 136180.0 + 27725 PLLRNWRKRT 10 73 447.2727979870097 1338.7965645612292 3 447.2728454470634 MULTI CID FTMS 0 0 0 18654 806950.6875 0.671766706639367 2 -0.1757659912109375 10 Unmodified _PLLRNWRKRT_ REV__ENST00000476966.5_1_1:156383609-156383882:-|nuORF 1.844237919475145 0.7181058121064529 3 {I|L} 1 -1 9.3323 0.0 0.0 0.69707 0.0 0.0 1207.7013477416965 0.0 1207.7013477416965 0.0 9.054718818899754 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.69707 + + 9 + 1 1.225 56717.4 1.0 12889 5773 18654 HBL1_DMSO_200M_050219_1,18664 HBL1_DMSO_200M_050219_1,18664,PLLRNWRKRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18665 89.345 84.0 655510.0 25 0 62792.0 3309 AYLAWLIYSI 10 60 606.8348020248462 1211.6550511164924 2 606.8350707888603 MULTI CID FTMS 0 0 0 18654 738561.5625 0.0653249063857579 5 -0.463104248046875 11 Unmodified _AYLAWLIYSI_ ENSG00000183307|ENST00000331437|TMEM121B 36.04419817259434 0.1993394420055842 3 YTV 3 9 37.039 0.0 0.0 3.0569 0.0 0.0 830.4646652295768 0.0 830.4646652295768 0.0 9.714876514554565 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.0 YTV 3.0569 - 139 + 1 1.225 45507.7 1.0 12890 5773 18654 HBL1_DMSO_200M_050219_1,18665 HBL1_DMSO_200M_050219_1,18665,AYLAWLIYSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18666 89.347 93.0 907270.0 25 0 99453.0 + 32490 SALEELVNV 9 112 487.263861697136 972.513170461072 2 487.2637206912041 MULTI CID FTMS 0 0 0 18654 558436.125 0.6248138053771881 -1 0.1316375732421875 12 Unmodified _SALEELVNV_ ENSG00000162408|ENST00000377705|NOL9 74.42276476219924 0.019389277360085 3 {[SA]|[TG]}{I|L}EE{I|L} 6 3 41.697 0.0 0.0 4.2876 0.0 0.0 0.0 327.1687850453096 327.1687850453096 19.033642699649235 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 1.5629529932484498 0.0 + {[SA]|[TG]}{I|L}EE{I|L} 4.2876 + + 510 1 1.225 70326.8 1.0 12891 5773 18654 HBL1_DMSO_200M_050219_1,18666 HBL1_DMSO_200M_050219_1,18666,SALEELVNV True True SALEELVNV 89.34739 487.263720691204 8524911.0 18654.0 ENSG00000162408|ENST00000377705|NOL9 3.3440540631612143 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18667 89.349 97.0 837410.0 25 0 122080.0 + 45756 YYISPRLTF 9 76 580.3108966406983 1158.6072403481965 2 580.3110839724541 MULTI CID FTMS 0 0 0 18654 560849.9375 0.01585533312289 10 -1.086517333984375 13 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 31.26834338654808 0.1333407332142048 3 YY{I|L}SP 5 4 61.788 0.0 0.0 5.3329 0.0 0.0 0.0 532.2933443658811 532.2933443658811 49.111869445640046 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + YY{I|L}SP 5.3329 + + 76 + 1 1.225 64938.7 1.0 12892 5773 18654 HBL1_DMSO_200M_050219_1,18667 HBL1_DMSO_200M_050219_1,18667,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18668 89.351 55.0 1619800.0 25 0 150700.0 + 41323 VPIGCSGCFL 10 121 498.2380715387701 994.4615901443402 2 498.2380859255791 MULTI CID FTMS 0 0 0 18654 529318.125 0.2016877770170873 -4 0.4275436401367187 14 Unmodified _VPIGCSGCFL_ REV__ENSG00000104147|ENST00000220514|OIP5 21.74664581756881 0.480091245866545 3 {[TV]|[{I|L}S]}QMP{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 8 -1 + 36.163 0.0 0.0 3.6365 3.6365 68.232 0.0 0.0 0.0 11.54901959985743 0.0392374713162979 0.0392374713162979 0.0392374713162979 0 0.0 1.5228787452803376 0.0 0.0 {[TV]|[{I|L}S]}QMP{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[TV]|[{I|L}S]}QMPC(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}[AG]MP{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[TV]|[{I|L}S]}QMP[CG]{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}[AG]MPC(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NT{I|L}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{NN|[MP]|[D{I|L}]|[EV]}NT{I|L}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L};[{I|L}T]NMP{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[{I|L}T]NMPC(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L};[VP]M[QT]{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 3.6365;3.6325;2.7051;2.7012;2.7012;2.4751;2.4712;2.1338;2.1299;2.0235 -;-;-;-;-;-;-;-;-;- 487 1 1.225 68493.9 1.0 12893 5773 18654 HBL1_DMSO_200M_050219_1,18668 HBL1_DMSO_200M_050219_1,18668,VPIGCSGCFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18669 89.354 141.0 822740.0 25 0 74844.0 39579 VCSILRIH 8 126 470.771936573161 939.529320213122 2 470.7721130251884 MULTI CID FTMS 0 0 0 18654 467696.46875 1.0 0 0.0 15 Unmodified _VCSILRIH_ ENSG00000236981|ENST00000375024|OR10G9 39.957323273325 0.2350051964751539 3 {[DS]|[MA]|[CV]|TT}S{I|L}{I|L}{I|L}HR 8 2 + 68.938 0.0 0.0 7.3375 7.3375 94.987 0.0 0.0 0.0 56.4638190872904 18.711827458464256 18.711827458464256 24.574484699911565 0 1.531234684152075 1.2218487496163564 0.0 0.2302046884880938 {[DS]|[MA]|[CV]|TT}S{I|L}{I|L}{I|L}HR;{[DS]|[MA]|[CV]|TT}S{I|L}{I|L}[RH]{I|L} 7.3375;4.7219 -;- 272 + 1 1.225 91785.7 1.0 12894 5773 18654 HBL1_DMSO_200M_050219_1,18669 HBL1_DMSO_200M_050219_1,18669,VCSILRIH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18670 89.356 92.0 553400.0 25 0 34292.0 + 45527 YTVEDLATQL 10 83 576.7920728341842 1151.5695927351685 2 576.7928954958916 MULTI CID FTMS 0 0 0 18654 468428.8125 0.1084239240819976 -4 0.4275436401367187 16 Unmodified _YTVEDLATQL_ ENSG00000124571|ENST00000265351|XPO5 65.23502041540118 0.0228537820337083 3 [YT][RH]YA[WR] 8 7 + 30.626 0.0 0.0 2.6595 2.6595 75.024 0.0 0.0 0.0 1.9956188252510465 6.975439491672972 1.9956188252510465 6.090671722280231 0 0.3494850021680094 1.3979400086720375 1.2059771852360797 0.0 [YT][RH]YA[WR];{NN|[MP]|[D{I|L}]|[EV]}{[ES]|[DT]|[{I|L}C]}Y{I|L}A[WR];{NN|[MP]|[D{I|L}]|[EV]}{[ES]|[DT]|[{I|L}C]}{I|L}YA[WR];[AG][C(Carbamidomethyl (C))R]Y{I|L}A[WR];[AG]S[QT]Y{I|L}A[WR];{[QN]|[E{I|L}]|[KN]}T[DV]YA[WR];[AG]S[QT]{I|L}YA[WR];[AG]T[HA][WP]A[WR];[{M(Oxidation (M))|F}V]V{[{M(Oxidation (M))|F}D]|MM}{I|L}A[WR];[AG]{I|L}[C(Carbamidomethyl (C))R]YA[WR] 2.6595;2.1306;2.0469;1.9822;1.8936;1.8786;1.8099;1.6909;1.6168;1.5679 -;-;-;-;-;-;-;-;-;- 540 1 1.225 46762.2 1.0 12895 5773 18654 HBL1_DMSO_200M_050219_1,18670 HBL1_DMSO_200M_050219_1,18670,YTVEDLATQL True True YTVEDLATQL 89.355773 576.792895495892 62662032.0 18654.0 ENSG00000124571|ENST00000265351|XPO5 6.027713457743327 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18671 89.358 76.0 614670.0 25 0 43349.0 + 45087 YPYPGELTMM 10 90 601.2682603336435 1200.521967734087 2 601.2667724490166 MULTI CID FTMS 0 0 0 18654 441404.125 0.9692639933059048 -1 0.1316375732421875 17 Unmodified _YPYPGELTMM_ ENSG00000057657|ENST00000369096|PRDM1;ENST00000481163.1_1_6:106546960-106547465:+|nuORF;nc|ENSG00000057657|O75626-2|PRDM1;nc|ENSG00000057657|O75626-3|PRDM1;PRDM1|p.G287Vfs*25|1|0.38|ENSG00000057657|chr6:106105016-106105017|-/GT|frameshift_variant 28.486842064014134 0.328649637529545 3 [YT][KS]{[ET]|[MV]}D{I|L}T[SG] 11 7 + 29.793 0.0 0.0 2.4817 2.4817 75.619 0.0 0.0 0.0 6.93961981649775 0.3829700549787809 0.3829700549787809 6.93961981649775 0 0.0 1.6989700043360187 0.2302046884880938 0.0 [YT][KS]{[ET]|[MV]}D{I|L}T[SG];[MT]K[WY]D{I|L}T[SG];{[CT]|[{M(Oxidation (M))|F}G]}R[WY]D{I|L}T[SG];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[WP][{I|L}T]MM;[MT]K[WY][NP]MM;{[CT]|[{M(Oxidation (M))|F}G]}[VG][WY]D{I|L}T[SG];{[CP]|[EA]}[VP]Y{M(Oxidation (M))|F}[{I|L}T]MM;[MT]K[WC(Carbamidomethyl (C))][{I|L}T]MM;{[CT]|[{M(Oxidation (M))|F}G]}R[WY][NP]MM 2.4817;1.9036;1.2173;0.77771;0.69699;0.45395;0.43147;0.29956;0.010697 -;-;-;-;-;-;-;-;- 192 1 1.225 38981.2 1.0 12896 5773 18654 HBL1_DMSO_200M_050219_1,18671 HBL1_DMSO_200M_050219_1,18671,YPYPGELTMM False True YPYPGELTMM 89.357535 601.266772449017 5911002.0 18654.0 nc|ENSG00000057657|O75626-2|PRDM1;;PRDM1|p.G287Vfs*25|1|0.38|ENSG00000057657|chr6:106105016-106105017|-/GT|frameshift_variant;;ENSG00000057657|ENST00000369096|PRDM1;;nc|ENSG00000057657|O75626-3|PRDM1;;ENST00000481163.1_1_6:106546960-106547465:+|nuORF 6.165512243906657 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18672 89.36 114.0 577160.0 25 0 54182.0 + 1641 ALMPVLNQV 9 97 492.78096866742857 983.5473844016572 2 492.7815429568291 MULTI CID FTMS 0 0 0 18654 385140.0 0.1758579949202363 5 -0.463104248046875 18 Unmodified _ALMPVLNQV_ ENSG00000223496|ENST00000435634|EXOSC6 32.116972079565 0.1225432171549407 3 [{I|L}A]M 3 6 26.923 0.0 0.0 2.7374 0.0 0.0 0.0 665.3628195425352 665.3628195425352 0.3127991373843031 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}A]M 2.7374 + + 391 1 1.225 55375.9 1.0 12897 5773 18654 HBL1_DMSO_200M_050219_1,18672 HBL1_DMSO_200M_050219_1,18672,ALMPVLNQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18673 89.364 238.0 456060.0 25 0 50816.0 + -1 MALKLDPIE 9 147 523.2816961658973 1044.5488393985945 2 523.2835571169853 MULTI CID FTMS 0 0 0 18654 297143.9375 0.5100921315310082 3 -0.2747116088867187 19 Oxidation (M) _M(Oxidation (M))ALKLDPIE_ REV__ENSG00000104885|ENST00000398665|DOT1L;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L 37.97399986684836 0.0865783450051559 3 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}P{M(Oxidation (M))|F}{I|L}[QP]{I|L} 9 -1 + 50.164 0.0 0.0 4.8025 4.8025 82.824 0.0 0.0 0.0 16.971420311620435 16.56681865368853 16.56681865368853 9.09617952689706 0 1.113982988912431 1.6989700043360187 0.0 0.3494850021680094 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}P{M(Oxidation (M))|F}{I|L}[QP]{I|L};W{I|L}E{M(Oxidation (M))|F}{I|L}[QP]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}P{M(Oxidation (M))|F}{I|L}[PA]G{I|L};W{I|L}[K{I|L}]{M(Oxidation (M))|F}[EP]{I|L};W{I|L}E{M(Oxidation (M))|F}{I|L}[PA]G{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}P{M(Oxidation (M))|F}{I|L}AAPV;[VS]{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}PPC{I|L};[VS]{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}P{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}P{M(Oxidation (M))|F}{I|L}[PA]AV;[K{I|L}]D{I|L}{M(Oxidation (M))|F}PPC{I|L} 4.8025;3.9316;3.8477;3.072;2.9717;2.9228;2.8018;2.61;2.5908;2.5751 -;-;-;-;-;-;-;-;-;- 1259 + 1 1.225 90769.0 1.0 12898 5773 18654 HBL1_DMSO_200M_050219_1,18673 HBL1_DMSO_200M_050219_1,18673,MALKLDPIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18674 89.378 784.0 329570.0 25 0 32046.0 + 16424 IYYFKANVF 9 203 582.8077847903214 1163.6010166474427 2 582.8081542849541 MULTI CID FTMS 0 0 0 18654 198148.40625 0.165554925209867 5 -0.463104248046875 20 Unmodified _IYYFKANVF_ ENSG00000111229|ENST00000228825|ARPC3 64.23631603340823 0.0237365939569086 3 {I|L}YYQQ{I|L}HS{I|L} 9 6 + 71.794 0.0 0.0 6.1699 6.1699 76.903 0.0 0.0 0.0 13.372505457509972 0.7918124604762511 0.7918124604762511 0.4575749056067479 0 0.75 2.0 0.8252574989159953 0.6989700043360187 {I|L}YYQQ{I|L}HS{I|L};{I|L}YYAAN{I|L}HS{I|L};{I|L}YYQQ{I|L}HTV;{I|L}YYAAN{I|L}HTV;{I|L}YY[KS][PG]HS{I|L};{I|L}YY[KS][PG]HTV;{I|L}YY[KS]AT[YR];[Y{I|L}]YNV{M(Oxidation (M))|F}{M(Oxidation (M))|F}AK;[Y{I|L}]YN{M(Oxidation (M))|F}V{M(Oxidation (M))|F}AK;{I|L}YYAAGG{I|L}HS{I|L} 6.1699;6.1306;6.1019;6.0626;6.061;5.9929;5.5226;5.0207;4.8951;4.7423 -;-;-;-;-;-;-;-;-;- 19696 + 1 1.225 193069.5 1.0 12899 5773 18654 HBL1_DMSO_200M_050219_1,18674 HBL1_DMSO_200M_050219_1,18674,IYYFKANVF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18676 89.382 27.0 2285000.0 25 0 214680.0 + 1260 AILMELERV 9 75 537.3040469435826 1072.5935409539652 2 537.3032714724541 MULTI CID FTMS 0 0 0 18675 1276271.5 0.2214441227594396 7 -0.782989501953125 1 Unmodified _AILMELERV_ ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR 24.99096001346401 0.2132109383330889 3 {I|L}A{I|L}ME{I|L}ERV 9 2 + 84.039 0.0 0.0 7.8351 7.8351 85.253 0.0 0.0 0.0 36.47817481888636 2.7805734442293613 2.7805734442293613 2.7805734442293613 0 1.0451140161145327 2.0 0.0 0.0 {I|L}A{I|L}ME{I|L}ERV;{I|L}A{I|L}ME{I|L}RD{I|L};{I|L}M{I|L}AE{I|L}ERV;{I|L}M{I|L}EA{I|L}ERV;{I|L}M{I|L}AE{I|L}RD{I|L};{I|L}M{I|L}EA{I|L}RD{I|L};[{M(Oxidation (M))|F}V][VG]{I|L}EA{I|L}[EP];[{M(Oxidation (M))|F}V][VG]{I|L}AE{I|L}[EP];{I|L}[{M(Oxidation (M))|F}V][TP]{I|L}ERV;[{M(Oxidation (M))|F}V]{I|L}[TP]{I|L}ERV 7.8351;7.5759;7.1293;7.1293;6.8701;6.8701;2.717;2.717;2.2143;1.7804 -;-;-;-;-;-;-;-;-;- 282 + 1 1.225 52952.7 1.0 12900 5774 18675 HBL1_DMSO_200M_050219_1,18676 HBL1_DMSO_200M_050219_1,18676,AILMELERV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18677 89.384 99.0 489120.0 25 0 56137.0 + 132 AALEEADKMFL 11 87 619.3099869338249 1236.6054209344495 2 619.3110229372978 MULTI CID FTMS 0 0 0 18675 477318.125 0.0663177360348668 6 -0.6630859375 2 Unmodified _AALEEADKMFL_ ENSG00000255302|ENST00000530028|EID1;nc|ENSG00000255302|Q9Y6B2-2|EID1 63.22749603027936 0.0560465731344335 3 [RV]EEAD 6 7 33.377 0.0 0.0 2.6991 0.0 0.0 0.0 534.2777193658811 534.2777193658811 6.377942535578022 0.0 0.0 0.0 0 0.6505149978319906 0.0 0.6861818737241735 0.0 [RV]EEAD 2.6991 - 524 + 1 1.225 40665.3 1.0 12901 5774 18675 HBL1_DMSO_200M_050219_1,18677 HBL1_DMSO_200M_050219_1,18677,AALEEADKMFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18678 89.386 73.0 1038300.0 25 0 76121.0 + 24243 MAPLALHL 8 77 433.2510418859958 864.4875308387916 2 433.2508727908134 MULTI CID FTMS 0 0 0 18675 675898.1875 0.6374541259798149 -1 0.05029296875 3 Unmodified _MAPLALHL_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1 41.81723621529253 0.2038889569391319 3 {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L} 8 0 + 64.227 0.0 0.0 7.4295 7.4295 96.432 0.0 0.0 0.0 24.841835760654646 11.202817147792189 11.202817147792189 64.2273109697827 0 0.3494850021680094 2.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L} 7.4295 + + 80 + 1 1.225 67182.0 1.0 12902 5774 18675 HBL1_DMSO_200M_050219_1,18678 HBL1_DMSO_200M_050219_1,18678,MAPLALHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18679 89.388 79.0 1203900.0 25 0 198280.0 + 26950 PEALPVLL 8 75 426.2648951914162 850.5152374496324 2 426.2651244997978 MULTI CID FTMS 0 0 0 18675 607446.0 1.0 0 0.0 4 Unmodified _PEALPVLL_ REV__ENSG00000197324|ENST00000359591|LRP10 23.1484247019978 0.5573009939494978 3 [VP][DV]PV{I|L}{I|L} 8 -1 + 27.879 0.0 0.0 3.2779 3.2779 73.583 0.0 0.0 0.0 3.707859921155155 8.023787536356576 3.707859921155155 3.707859921155155 0 0.5994850021680094 1.3979400086720375 0.0 0.0 [VP][DV]PV{I|L}{I|L};[EP]PA{I|L}V{I|L}{I|L};[EP]AP{I|L}V{I|L}{I|L};{[HG]|PP}EA{I|L}V{I|L}{I|L};[EP]A{I|L}PV{I|L}{I|L};[EP]PAV{I|L}{I|L}{I|L};[EP]APV{I|L}{I|L}{I|L};[VP][DV]P{I|L}V{I|L};{[HG]|PP}EAV{I|L}{I|L}{I|L};[EP]PA{I|L}{I|L}V{I|L} 3.2779;2.842;2.842;2.684;2.6349;2.488;2.488;2.3345;2.33;1.8985 -;-;-;-;+;-;-;-;-;- + 131 1 1.225 79104.8 1.0 12903 5774 18675 HBL1_DMSO_200M_050219_1,18679 HBL1_DMSO_200M_050219_1,18679,PEALPVLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18680 89.39 107.0 481630.0 25 0 46855.0 + 41892 VQDELHSVLGL 11 96 605.3276843104711 1208.640815687742 2 605.3269531130791 MULTI CID FTMS 0 0 0 18675 594789.1875 1.0 0 0.0 5 Unmodified _VQDELHSVLGL_ ENSG00000204560|ENST00000376442|DHX16 71.70789743142352 0.0274550572689813 3 SV{I|L}GG{I|L}G{I|L} 8 7 50.315 0.0 0.0 4.163 0.0 0.0 494.21287734199376 0.0 494.21287734199376 0.0 12.066533862143132 0.0 0.0 0 1.3182503180159344 0.0 1.305462187404089 0.0 SV{I|L}GG{I|L}G{I|L} 4.163 - 694 1 1.225 42840.4 1.0 12904 5774 18675 HBL1_DMSO_200M_050219_1,18680 HBL1_DMSO_200M_050219_1,18680,VQDELHSVLGL True True VQDELHSVLGL 89.390258 605.326953113079 5590657.5 18675.0 ENSG00000204560|ENST00000376442|DHX16 7.367702802022298 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18681 89.393 125.0 566320.0 25 0 63624.0 + 22101 LPPPVFQM 8 88 464.7509811866896 927.4874094401792 2 464.7513610720634 MULTI CID FTMS 0 0 0 18675 466026.09375 0.9322806545279002 6 -0.6630859375 6 Unmodified _LPPPVFQM_ ENSG00000173726|ENST00000366607|TOMM20;ENST00000534518.1_1_11:77024925-77025045:+|nuORF 56.04830969593885 0.114297258605095 3 [{I|L}P]PPV{M(Oxidation (M))|F}QM 8 0 + 42.828 0.0 0.0 4.6177 4.6177 79.291 0.0 0.0 0.0 5.511525224473814 5.357121054785381 5.357121054785381 5.511525224473814 0 1.0924778212679485 1.6989700043360187 0.0 0.0 + + [{I|L}P]PPV{M(Oxidation (M))|F}QM;[VP]PP{I|L}{M(Oxidation (M))|F}QM;[{I|L}P]{[ET]|[MV]}P{I|L}QM;[VP]PP{M(Oxidation (M))|F}{I|L}QM;[{I|L}P]{[ET]|[MV]}{I|L}PQM;[{I|L}P][YN]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]P{M(Oxidation (M))|F}P{I|L}QM;[{I|L}P]P{[ET]|[MV]}{I|L}QM;{[HG]|PP}VP{I|L}{M(Oxidation (M))|F}QM;[YN]{M(Oxidation (M))|F}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.6177;4.0234;3.8318;3.6989;3.4027;3.3944;3.3743;3.2452;3.158;3.0974 +;-;-;-;-;-;-;-;-;- + 331 1 1.225 60000.2 1.0 12905 5774 18675 HBL1_DMSO_200M_050219_1,18681 HBL1_DMSO_200M_050219_1,18681,LPPPVFQM True True LPPPVFQM 89.392829 464.751361072063 14171746.5 18675.0 ENST00000534518.1_1_11:77024925-77025045:+|nuORF;;ENSG00000173726|ENST00000366607|TOMM20 5.92246945699056 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18682 89.402 510.0 222520.0 25 0 84685.0 + 20105 LKEMKRWKARR 11 94 751.4502457048825 1500.885938476565 2 751.4512817263603 MULTI CID FTMS 0 0 0 18675 382424.6875 0.6469727922913026 3 -0.307342529296875 7 Unmodified _LKEMKRWKARR_ REV__ENSG00000106410|ENST00000467773|NOBOX;REV__nc|ENSG00000106410|O60393-2|NOBOX 1.1933415558491238 0.8695176722560516 3 [DV]{I|L}E 4 -1 20.635 0.0 0.0 1.3748 0.0 0.0 0.0 1041.641315023693 1041.641315023693 0.2074774445909035 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 [DV]{I|L}E 1.3748 - 49 1 1.225 96418.7 1.0 12906 5774 18675 HBL1_DMSO_200M_050219_1,18682 HBL1_DMSO_200M_050219_1,18682,LKEMKRWKARR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18683 89.405 188.0 588600.0 25 0 65744.0 + -1 IFHCGGYSL 9 111 527.2430461162483 1052.4715392992964 2 527.2433349490166 MULTI CID FTMS 0 0 0 18675 353918.5625 0.5407557616536571 2 -0.2244186401367187 8 Carbamidomethyl (C) _IFHC(Carbamidomethyl (C))GGYSL_ REV__ENSG00000136197|ENST00000350427|C7orf25;REV__nc|nan|Q9BPX7-2|C7orf25 16.942295170755138 0.3780752226737986 3 {I|L}TD 3 -1 26.198 0.0 0.0 2.4892 0.0 0.0 0.0 720.2906920941623 720.2906920941623 2.8971314980721274 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}TD 2.4892 - 144 + 1 1.225 91330.1 1.0 12907 5774 18675 HBL1_DMSO_200M_050219_1,18683 HBL1_DMSO_200M_050219_1,18683,IFHCGGYSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18684 89.415 568.0 554640.0 25 0 18927.0 -1 0 146 943.478989660451 1884.943426387702 2 943.9811889529228 MULTI CID FTMS 0 0 0 18675 311757.5625 0.8359337201751262 2 -0.2244186401367187 9 3 [NP]N{I|L}{I|L}TR[YC(Carbamidomethyl (C))]NNP 12 -1 65.757 0.0 0.0 3.4885 0.0 0.0 0.0 425.2403849394013 425.2403849394013 17.95350686812708 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.6861818737241735 1.4386218330464624 [NP]N{I|L}{I|L}TR[YC(Carbamidomethyl (C))]NNP 3.4885 - 18142 1 1.225 200302.3 1.0 12908 5774 18675 HBL1_DMSO_200M_050219_1,18684 HBL1_DMSO_200M_050219_1,18684, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18685 89.42 237.0 514230.0 25 0 76643.0 + -1 RILDIDIPMSV 11 96 644.3525519342716 1286.690550935343 2 644.3530761599541 MULTI CID FTMS 0 0 0 18675 310777.375 0.3730541485564031 2 -0.2244186401367187 10 Oxidation (M) _RLLDLDIPM(Oxidation (M))SV_ nc|ENSG00000135457|Q12800-2|TFCP2;ENSG00000135457|ENST00000257915|TFCP2;nc|ENSG00000135457|Q12800-4|TFCP2;nc|ENSG00000135457|Q12800-3|TFCP2 55.23464941255904 0.0886405999673349 3 [VS][TP]{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W 11 -1 + 53.836 0.0 0.0 4.1841 4.1841 73.198 0.0 0.0 0.0 2.04119982655925 7.30616517352734 2.04119982655925 2.04119982655925 0 1.1677353201839438 1.3979400086720375 0.6989700043360187 0.0 [VS][TP]{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;[TP]SV{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;{[TV]|[{I|L}S]}[PS]{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}P{I|L}D{I|L}{I|L}[TP]AP;{[TV]|[{I|L}S]}{I|L}[PS]{I|L}D{I|L}P{M(Oxidation (M))|F}W;[{I|L}T]V[PS]{I|L}D{I|L}P{M(Oxidation (M))|F}W;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}P{I|L}D{I|L}[PS]VPV;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}P{I|L}D{I|L}[PS]VVP;[TP]SV{I|L}{I|L}{[TV]|[{I|L}S]}[HA]{[{M(Oxidation (M))|F}C]|[YS]} 4.1841;4.0255;3.2536;2.8021;2.631;2.0522;1.6848;1.5323;0.67957 -;-;-;-;-;-;-;-;- 269 1 1.225 96549.1 1.0 12909 5774 18675 HBL1_DMSO_200M_050219_1,18685 HBL1_DMSO_200M_050219_1,18685,RLLDLDIPMSV False False RILDIDIPMSV 89.419906 644.353076159954 12101315.0 18675.0 nc|ENSG00000135457|Q12800-2|TFCP2;;ENSG00000135457|ENST00000257915|TFCP2;;nc|ENSG00000135457|Q12800-4|TFCP2;;nc|ENSG00000135457|Q12800-3|TFCP2 7.321110725402832 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18686 89.43 596.0 554860.0 25 0 20531.0 + 7877 ELLSSLPSI 9 138 958.544888213976 957.537611747376 1 958.5499145388604 MULTI CID FTMS 0 0 0 18675 300962.4375 0.2227454752416368 4 -0.412811279296875 11 Unmodified _ELLSSLPSI_ REV__ENST00000297109.10_1_5:153839035-153839215:+|nuORF 88.90359156742426 0.0153595091083554 3 {[QN]|[E{I|L}]|[KN]}{I|L}SS{I|L}PTV 9 -1 + 58.994 0.0 0.0 6.1611 6.1611 85.205 0.0 0.0 0.0 6.388128427336298 13.467874862246552 6.388128427336298 6.388128427336298 0 0.9604093769761876 1.0457574905606752 2.611407999752478 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}SS{I|L}PTV;{I|L}{I|L}ESS{I|L}PTV;{[TV]|[{I|L}S]}{I|L}ES{I|L}PTV;{[TV]|[{I|L}S]}{I|L}SE{I|L}PTV;{[TV]|[{I|L}S]}{I|L}S{I|L}EPTV;{I|L}{I|L}SES{I|L}PTV;{I|L}{I|L}SSE{I|L}PTV;{I|L}{I|L}SS{I|L}EPTV;{[QN]|[E{I|L}]|[KN]}{[CA]|SS}{I|L}{I|L}PTV;[{I|L}T]VES{I|L}PTV 6.1611;5.4939;5.3194;5.2155;5.1783;5.1542;5.0503;5.0131;4.7346;4.6981 -;-;-;-;-;-;-;-;-;- 4153 1 1.225 212662.0 1.0 12910 5774 18675 HBL1_DMSO_200M_050219_1,18686 HBL1_DMSO_200M_050219_1,18686,ELLSSLPSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18687 89.442 674.0 255350.0 25 0 17289.0 + 10772 FYPELKLAY 9 186 572.3081912761447 1142.6018296190894 2 572.3074828982353 MULTI CID FTMS 0 0 0 18675 255229.265625 0.2717199674308779 3 -0.307342529296875 12 Unmodified _FYPELKLAY_ ENSG00000157349|ENST00000288071|DDX19B;ENSG00000168872|ENST00000302243|DDX19A;ENST00000562140.2_1_16:70398455-70404584:+|nuORF;ENST00000566574.5_1_16:70398922-70399087:+|nuORF;ENST00000567012.5_1_16:70398922-70400166:+|nuORF;ENST00000569319.5_1_16:70395351-70399888:+|nuORF;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;nc|ENSG00000168872|Q9NUU7-2|DDX19A;nc|ENSG00000260537|Q9UMR2-2|DDX19B;nc|ENSG00000260537|Q9UMR2-3|DDX19B;nc|ENSG00000260537|Q9UMR2-4|DDX19B 39.957323273325 0.0756908302845263 3 [EP]{I|L}K{I|L}AY{M(Oxidation (M))|F}Y 9 4 + 52.285 0.0 0.0 4.5759 4.5759 78.395 0.0 0.0 0.0 18.10232517995084 5.66442754764136 5.66442754764136 4.771212547196626 0 0.2742275032520141 1.3010299956639813 0.6109243748081782 0.0 [EP]{I|L}K{I|L}AY{M(Oxidation (M))|F}Y;[EP]{I|L}K{I|L}HP{M(Oxidation (M))|F}Y;[EP]{I|L}KA{I|L}Y{M(Oxidation (M))|F}Y;[{I|L}P]EK{I|L}AY{M(Oxidation (M))|F}Y;[Y{M(Oxidation (M))|F}]PE{I|L}[K{I|L}]AY;[{I|L}P]EK{I|L}HP{M(Oxidation (M))|F}Y;[Y{M(Oxidation (M))|F}]PE{I|L}[K{I|L}]S{M(Oxidation (M))|F};[TP][R{I|L}]{I|L}AY{M(Oxidation (M))|F}Y;[Y{M(Oxidation (M))|F}]PE{I|L}[HK]P{I|L};[K{I|L}]{I|L}EPAY{M(Oxidation (M))|F}Y 4.5759;4.1584;3.4076;2.9916;2.7192;2.5741;2.2481;2.0149;1.9981;1.9245 -;-;-;-;+;-;-;-;-;- + 1681 1 1.225 133537.0 1.0 12911 5774 18675 HBL1_DMSO_200M_050219_1,18687 HBL1_DMSO_200M_050219_1,18687,FYPELKLAY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18688 89.453 628.0 371810.0 25 0 39514.0 + 20513 LLLPDQPPYHL 11 157 653.3645018065488 1304.7144506798977 2 653.3633300662041 MULTI CID FTMS 0 0 0 18675 244572.34375 0.959810797584038 -3 0.2901077270507812 13 Unmodified _LLLPDQPPYHL_ ENSG00000156587|ENST00000287156|UBE2L6 53.832793166522166 0.0964040679835549 3 {I|L}{I|L}{I|L}PDQPPYH{I|L} 11 0 + 76.261 0.0 0.0 5.845 5.845 85.768 0.0 0.0 0.0 24.35728569561437 8.19615684751274 8.19615684751274 8.19615684751274 0 0.9247425010840048 1.6989700043360187 0.4247425010840047 0.5 + + {I|L}{I|L}{I|L}PDQPPYH{I|L};{I|L}{I|L}{I|L}PDQPW{I|L}PN;{I|L}{I|L}{I|L}PDQPW[NP]{I|L};{I|L}{I|L}{I|L}PDQPW[QP]V;{I|L}{I|L}{I|L}PDQPP[WQ]V;{I|L}{I|L}{I|L}PDQK[DN]H{I|L};{I|L}{I|L}{I|L}PD[AG]PPYH{I|L};{I|L}{I|L}{I|L}PDQ{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L};{I|L}{I|L}{I|L}PDQPP[W{I|L}]N;{I|L}{I|L}{I|L}PDQ{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TV 5.845;5.2168;5.0336;4.978;4.9487;4.7685;4.7621;4.6198;4.5916;4.5642 +;-;-;-;-;-;-;-;-;- + 2658 + 1 1.225 172119.0 1.0 12912 5774 18675 HBL1_DMSO_200M_050219_1,18688 HBL1_DMSO_200M_050219_1,18688,LLLPDQPPYHL True True LLLPDQPPYHL 89.453073 653.363330066204 4923667.0 18675.0 ENSG00000156587|ENST00000287156|UBE2L6 7.072672526041667 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18689 89.458 205.0 303490.0 25 0 46271.0 5336 DLGQGHPA 8 94 397.6927891020698 793.3710252709396 2 397.6927368044853 MULTI CID FTMS 0 0 0 18675 245241.578125 0.1280121654229746 4 -0.412811279296875 14 Unmodified _DLGQGHPA_ ENSG00000204308|ENST00000375094|RNF5 2.889219685676258 0.8067950007271085 3 [DV]{I|L} 3 7 20.942 0.0 0.0 2.6396 0.0 0.0 0.0 463.166746056349 463.166746056349 10.346192932050986 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [DV]{I|L} 2.6396 - 42 1 1.225 54136.8 1.0 12913 5774 18675 HBL1_DMSO_200M_050219_1,18689 HBL1_DMSO_200M_050219_1,18689,DLGQGHPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18690 89.464 326.0 417710.0 25 0 38816.0 + 20743 LLSPVVPQI 9 139 483.30494103583993 964.59532913848 2 483.3049194216728 MULTI CID FTMS 0 0 0 18675 240511.125 0.7179419154393842 3 -0.307342529296875 15 Unmodified _LLSPVVPQI_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 77.98433622928108 0.0180125044636492 3 [VP]SV{I|L}{I|L} 6 6 39.037 0.0 0.0 4.047 0.0 0.0 0.0 353.18398260601674 353.18398260601674 11.328927574747835 0.0 0.0 0.0 0 0.5 1.154901959985743 0.9634679910804403 0.0 [VP]SV{I|L}{I|L} 4.047 - 1175 1 1.225 101974.3 1.0 12914 5774 18675 HBL1_DMSO_200M_050219_1,18690 HBL1_DMSO_200M_050219_1,18690,LLSPVVPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18691 89.468 231.0 410650.0 25 0 46141.0 + 29607 QLVRDLLEV 9 144 542.8220182635556 0 542.8227416872978 PEAK CID FTMS 0 0 0 18675 237887.125 0.0535452762868584 10 -1.1127700805664062 16 Unmodified _QLVRDLLEV_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 99.79894945604345 0.0288293043136998 3 Q{I|L}{I|L}Q{I|L}Q 6 6 25.939 0.0 0.0 2.3938 0.0 0.0 135.09007068527984 222.0884798639281 357.178550549208 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L}{I|L}Q{I|L}Q 2.3938 - 454 + 1 1.225 76720.7 1.0 12915 5774 18675 HBL1_DMSO_200M_050219_1,18691 HBL1_DMSO_200M_050219_1,18691,QLVRDLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18692 89.471 121.0 319730.0 25 0 36839.0 + 39043 TVVDTKVGV 9 74 459.2683719921142 916.5221910510284 2 459.2688781619072 MULTI CID FTMS 0 0 0 18675 228332.40625 0.0880972050180114 6 -0.6630859375 17 Unmodified _TVVDTKVGV_ REV__ENSG00000101638|ENST00000315087|ST8SIA5;REV__nc|ENSG00000101638|O15466-2|ST8SIA5 8.593279151180031 0.6146971463335029 3 V 1 -1 13.979 0.0 0.0 1.5253 0.0 0.0 799.4428204839371 0.0 799.4428204839371 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.5253 + + 65 + 1 1.225 34812.0 1.0 12916 5774 18675 HBL1_DMSO_200M_050219_1,18692 HBL1_DMSO_200M_050219_1,18692,TVVDTKVGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18693 89.474 172.0 519680.0 25 0 81699.0 + + 23229 RQWADTFIV 9 93 568.2984955485404 1134.5824381638806 2 568.2983886599541 MULTI CID FTMS 0 0 0 18675 224989.34375 0.5360862716844137 -3 0.2901077270507812 18 Unmodified _LSSWFHFVL_ ENSG00000105875|ENST00000354475|WDR91;nc|ENSG00000105875|A4D1P6-3|WDR91;nc|ENSG00000105875|A4D1P6-2|WDR91;ENST00000466182.5_1_7:134882699-134896254:-|nuORF 30.22481116460888 0.1466181017706357 3 {NN|[MP]|[D{I|L}]|[EV]}[KG]QDT{M(Oxidation (M))|F}{I|L}V 10 -1 + 58.624 0.0 0.0 5.1671 5.1671 84.314 0.0 0.0 0.0 7.447274948966935 44.020403316574246 7.447274948966935 9.164539485499256 0 0.75 1.3979400086720375 0.7302046884880937 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KG]QDT{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[KG][AG]DT{M(Oxidation (M))|F}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}W[{I|L}T]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}W[{I|L}T]{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V 5.1671;4.3593;1.959;0.89493 -;-;-;- 326 1 1.225 73676.7 1.0 12917 5774 18675 HBL1_DMSO_200M_050219_1,18693 HBL1_DMSO_200M_050219_1,18693,LSSWFHFVL False False RQWADTFIV 89.474274 568.298388659954 9009655.0 18675.0 ENSG00000105875|ENST00000354475|WDR91;;nc|ENSG00000105875|A4D1P6-3|WDR91;;nc|ENSG00000105875|A4D1P6-2|WDR91;;ENST00000466182.5_1_7:134882699-134896254:-|nuORF 5.513485113779704 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18694 89.488 800.0 138640.0 25 0 19960.0 + 22973 LSGCKSSV 8 127 780.3933195390135 779.3860430724135 1 780.3943969607353 MULTI CID FTMS 0 0 0 18675 208847.75 0.8010049105107199 1 -0.1254730224609375 19 Unmodified _LSGCKSSV_ REV__ENST00000379568.3_1_6:10707667-10709213:+|nuORF 11.640296217721598 0.738950129755968 3 [W{M(Oxidation (M))|F}]VTEV 6 -1 + 53.689 0.0 0.0 6.8887 6.8887 82.322 0.0 0.0 0.0 2.309224750678922 7.872249758351799 2.309224750678922 2.309224750678922 0 1.1549471895720984 0.0 0.8494850021680094 0.0 [W{M(Oxidation (M))|F}]VTEV;{[RE]|[WV]}{M(Oxidation (M))|F}TEV;{[TV]|[{I|L}S]}W{M(Oxidation (M))|F}EV;{M(Oxidation (M))|F}WVTD{I|L};{NN|[MP]|[D{I|L}]|[EV]}TVS{M(Oxidation (M))|F}V;[W{M(Oxidation (M))|F}]{I|L}SEV;{[ET]|[MV]}R{M(Oxidation (M))|F}EV;{[RE]|[WV]}T{M(Oxidation (M))|F}EV;{[ET]|[MV]}{M(Oxidation (M))|F}REV;{M(Oxidation (M))|F}W{I|L}SD{I|L} 6.8887;6.5924;6.3189;5.8786;5.5007;5.469;5.4435;5.4369;5.1121;4.7593 -;-;-;-;-;-;-;-;-;- 561 1 1.225 80745.4 0.959999978542328 12918 5774 18675 HBL1_DMSO_200M_050219_1,18694 HBL1_DMSO_200M_050219_1,18694,LSGCKSSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18695 89.503 800.0 123160.0 25 0 15990.0 + 19355 LEPLRRDKLSL 11 138 670.4055020229365 1338.796451112673 2 670.4059326052666 MULTI CID FTMS 0 0 0 18675 184454.15625 0.6017708940262148 4 -0.412811279296875 20 Unmodified _LEPLRRDKLSL_ REV__ENSG00000011114|ENST00000334746|BTBD7;REV__nc|ENSG00000011114|Q9P203-5|BTBD7 9.38312468134398 0.8308777417566128 3 [{I|L}T]T{I|L}S 5 -1 17.906 0.0 0.0 1.3375 0.0 0.0 0.0 820.4664089586291 820.4664089586291 6.312281309285623 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.25 0.0 [{I|L}T]T{I|L}S 1.3375 - 215 1 1.225 80310.1 0.9700000286102296 12919 5774 18675 HBL1_DMSO_200M_050219_1,18695 HBL1_DMSO_200M_050219_1,18695,LEPLRRDKLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18697 89.508 53.0 890140.0 25 0 140850.0 -1 LLEKNAMRV 9 95 545.3093551188538 1088.6041573045077 2 545.3096801638603 MULTI CID FTMS 0 0 0 18696 480384.09375 0.1146211102856108 4 -0.3978729248046875 1 Oxidation (M) _LLEKNAM(Oxidation (M))RV_ ENSG00000096433|ENST00000605930|ITPR3;ENSG00000123104|ENST00000381340|ITPR2;ENSG00000150995|ENST00000649015|ITPR1;ENST00000467056.5_1_3:4536161-4687445:+|nuORF;nc|ENSG00000123104|Q14571-2|ITPR2;nc|ENSG00000150995|Q14643-2|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1 12.531546534597751 0.4974689918368763 3 Y{I|L} 2 -1 20.969 0.0 0.0 1.9262 0.0 0.0 0.0 809.4135350537395 809.4135350537395 0.2068085446146028 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 1.9262 - 142 + 1 1.246 40487.4 1.0 12920 5775 18696 HBL1_DMSO_200M_050219_1,18697 HBL1_DMSO_200M_050219_1,18697,LLEKNAMRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18698 89.512 205.0 249570.0 25 0 45779.0 -1 MLEPHSCQYI 10 77 647.285216516121 1292.5558800990418 2 647.2857543826103 MULTI CID FTMS 0 0 0 18696 301477.53125 0.1608182719442284 4 -0.3978729248046875 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LEPHSC(Carbamidomethyl (C))QYI_ ENSG00000068912|ENST00000185150|ERLEC1;nc|ENSG00000068912|Q96DZ1-2|ERLEC1;nc|ENSG00000068912|Q96DZ1-3|ERLEC1 20.453626601364224 0.5043500229302764 3 QY{M(Oxidation (M))|F}QY{I|L} 6 -1 41.203 0.0 0.0 3.1877 0.0 0.0 432.1502857892594 0.0 432.1502857892594 0.0 19.77629699328141 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.805462187404089 QY{M(Oxidation (M))|F}QY{I|L} 3.1877 - 68 1 1.246 48308.9 1.0 12921 5775 18696 HBL1_DMSO_200M_050219_1,18698 HBL1_DMSO_200M_050219_1,18698,MLEPHSCQYI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18699 89.514 100.0 706300.0 25 0 77569.0 + 30868 RIMPEDIIINC 11 61 658.8385216493598 1315.6624903655195 2 658.8392822146416 MULTI CID FTMS 0 0 0 18696 525630.625 0.2795976921502109 -2 0.1757659912109375 3 Unmodified _RIMPEDIIINC_ ENSG00000198900|ENST00000361337|TOP1 23.80106514851385 0.5333463718001408 3 {I|L}{I|L}{[CA]|SS}[EP]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]} 12 3 + 40.301 0.0 0.0 3.0631 3.0631 77.552 0.0 0.0 0.0 1.8842499412940583 27.78327826237401 1.8842499412940583 8.226825097560422 0 1.0 1.2218487496163564 0.0 0.0 {I|L}{I|L}{[CA]|SS}[EP]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}[EP]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]};[VP][KC][QA]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]} 3.0631;2.4378;1.8005 -;-;- 51 1 1.246 64635.1 1.0 12922 5775 18696 HBL1_DMSO_200M_050219_1,18699 HBL1_DMSO_200M_050219_1,18699,RIMPEDIIINC False True RIMPEDIIINC 89.514447 658.839282214642 24074316.0 18696.0 ENSG00000198900|ENST00000361337|TOP1 7.33882999420166 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18700 89.517 105.0 1300300.0 25 0 239530.0 + 30638 RFPDFVRDF 9 86 599.8038732626476 1197.593193592095 2 599.8042480349541 MULTI CID FTMS 0 0 0 18696 510085.65625 0.1444281354967111 -2 0.1757659912109375 4 Unmodified _RFPDFVRDF_ ENSG00000213339|ENST00000250237|QTRT1;ENST00000587500.5_1_19:10823370-10823943:+|nuORF 70.92866715596459 0.0207399673367505 3 {M(Oxidation (M))|F}RPD{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F} 9 2 + 66.124 0.0 0.0 5.5214 5.5214 80.716 0.0 0.0 0.0 45.15539695625556 9.501962355242952 9.501962355242952 4.018637558036673 0 2.504432191740108 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}RPD{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};R{M(Oxidation (M))|F}PD{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]PD{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{M(Oxidation (M))|F}RPD{I|L}A[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F};{M(Oxidation (M))|F}D[RP]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};R{M(Oxidation (M))|F}PD{I|L}A[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F};{M(Oxidation (M))|F}[VG]PD{I|L}A[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F};{M(Oxidation (M))|F}R{M(Oxidation (M))|F}[DP]VRD{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]PD{M(Oxidation (M))|F}VV[TA]{M(Oxidation (M))|F};{M(Oxidation (M))|F}RPD{I|L}A[YT]C{I|L} 5.5214;5.1859;5.0447;4.6246;4.3542;4.2891;3.8557;3.6853;3.5272;3.4777 -;+;+;-;-;-;-;-;-;- + 373 + 1 1.246 102252.8 1.0 12923 5775 18696 HBL1_DMSO_200M_050219_1,18700 HBL1_DMSO_200M_050219_1,18700,RFPDFVRDF True True RFPDFVRDF 89.516703 599.804248034954 56218845.0 18696.0 ENST00000587500.5_1_19:10823370-10823943:+|nuORF;;ENSG00000213339|ENST00000250237|QTRT1 9.93760871887207 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18701 89.52 153.0 586430.0 25 0 22727.0 -1 0 100 628.9214384110145 3139.570809722072 5 629.1227294802666 MULTI CID FTMS 0 0 0 18696 412248.625 0.4658292353030245 3 -0.2873382568359375 5 3 {M(Oxidation (M))|F}EEA{I|L}SA{I|L}SD 10 -1 65.904 0.0 0.0 2.0991 0.0 0.0 1472.7745482063265 601.3190145373054 2074.093562743632 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.5994850021680094 0.0 {M(Oxidation (M))|F}EEA{I|L}SA{I|L}SD 2.0991 - 1464 + 1 1.246 73539.1 1.0 12924 5775 18696 HBL1_DMSO_200M_050219_1,18701 HBL1_DMSO_200M_050219_1,18701, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18702 89.521 61.0 766020.0 25 0 48934.0 19173 LEEHDVLSV 9 92 520.7683622230878 0 520.7682983279228 PEAK CID FTMS 0 0 0 18696 301147.9375 1.0 0 0.0 6 Unmodified _LEEHDVLSV_ ENSG00000172497|ENST00000307624|ACOT12 11.640296217721598 0.2934555500198502 3 AA 2 9 10.969 0.0 0.0 1.0552 0.0 0.0 265.08499666661925 629.3396090143186 894.4246056809379 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AA 1.0552 - 39 + 1 1.246 41214.6 1.0 12925 5775 18696 HBL1_DMSO_200M_050219_1,18702 HBL1_DMSO_200M_050219_1,18702,LEEHDVLSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18703 89.529 410.0 815810.0 25 0 70093.0 + 27810 FPPLPRPLV 9 217 517.3185843076021 1032.6226156820042 2 518.3214599490166 MULTI CID FTMS 0 0 0 18696 289176.53125 0.1792146398079049 -2 0.1757659912109375 7 Unmodified _PLPSLSPLPL_ ENST00000549393.1_17:6916754-6917028:+|nuORF 15.847184025352805 0.5816416552707754 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P 3 8 29.239 0.0 0.0 2.8315 0.0 0.0 0.0 688.4256912037416 688.4256912037416 10.760978122791933 0.0 0.0 0.0 0 0.6307196863200843 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P 2.8315 - 1736 1 1.246 265813.3 1.0 12926 5775 18696 HBL1_DMSO_200M_050219_1,18703 HBL1_DMSO_200M_050219_1,18703,PLPSLSPLPL False False FPPLPRPLV 89.528599 518.321459949017 35428324.0 18696.0 ENST00000549393.1_17:6916754-6917028:+|nuORF 5.546363989512126 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18704 89.535 344.0 573870.0 25 0 70557.0 + 2961 AVIDRFLRL 9 105 368.229380821354 1101.666313064262 3 368.2292968630791 MULTI CID FTMS 0 0 0 18696 271366.0625 0.5546290569283779 -2 0.1757659912109375 8 Unmodified _AVIDRFLRL_ ENSG00000132313|ENST00000337109|MRPL35;nc|ENSG00000132313|Q9NZE8-2|MRPL35 37.07464296494664 0.0915153923251136 3 AV{I|L}D{I|L}R{M(Oxidation (M))|F}{I|L}R 9 2 + 91.826 0.0 0.0 8.3352 8.3352 82.771 0.0 0.0 0.0 36.47817481888637 0.6694678963061307 0.6694678963061307 0.6694678963061307 0 0.4247425010840047 2.0 0.0 1.579689690656103 AV{I|L}D{I|L}R{M(Oxidation (M))|F}{I|L}R;AV{I|L}D{I|L}R{M(Oxidation (M))|F}R{I|L};AV{I|L}DR{I|L}{M(Oxidation (M))|F}{I|L}R;AV{I|L}{I|L}DR{M(Oxidation (M))|F}{I|L}R;AV{I|L}DR{I|L}{M(Oxidation (M))|F}R{I|L};AV{I|L}{I|L}DR{M(Oxidation (M))|F}R{I|L};AV{I|L}DR{M(Oxidation (M))|F}{I|L}{I|L}R;AV{I|L}DR{M(Oxidation (M))|F}{I|L}R{I|L};A{I|L}VD{I|L}R{M(Oxidation (M))|F}{I|L}R;A{I|L}VD{I|L}R{M(Oxidation (M))|F}R{I|L} 8.3352;8.2744;8.0619;8.0219;8.0011;7.9612;7.4274;7.3667;5.5153;5.4546 -;-;-;-;-;-;-;+;-;- + 324 + 1 1.246 168327.1 1.0 12927 5775 18696 HBL1_DMSO_200M_050219_1,18704 HBL1_DMSO_200M_050219_1,18704,AVIDRFLRL True True AVIDRFLRL 89.534808 368.229296863079 3212105.25 18696.0 ENSG00000132313|ENST00000337109|MRPL35;;nc|ENSG00000132313|Q9NZE8-2|MRPL35 3.943930149078369 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18705 89.54 284.0 428550.0 25 0 33686.0 + 24027 LVYPEELKPVL 11 106 650.3814124039818 1298.7482718747635 2 650.3818847537041 MULTI CID FTMS 0 0 0 18696 267586.0 0.4234551598786102 1 -0.0989456176757812 9 Unmodified _LVYPEELKPVL_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 40.23920728925047 0.2087110615831976 3 [{I|L}V]YPEE{I|L}K[VP]{I|L} 11 0 + 62.458 0.0 0.0 4.8091 4.8091 81.76 0.0 0.0 0.0 22.10341990638529 6.320010579541027 6.320010579541027 7.596678446896306 0 0.8252574989159953 1.5228787452803376 0.3807196863200844 0.0 + + [{I|L}V]YPEE{I|L}K[VP]{I|L};[{I|L}V]YPEE{I|L}K{I|L}[VP];[{I|L}V]YP[RP][{M(Oxidation (M))|F}V]{I|L}[VP] 4.8091;4.2242;1.6427 +;-;- + 1285 + 1 1.246 94096.7 1.0 12928 5775 18696 HBL1_DMSO_200M_050219_1,18705 HBL1_DMSO_200M_050219_1,18705,LVYPEELKPVL False True LVYPEELKPVL 89.540045 650.381884753704 13128556.0 18696.0 ENSG00000080345|ENST00000444746|RIF1;;nc|ENSG00000080345|Q5UIP0-2|RIF1 6.448399543762207 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18706 89.554 790.0 350190.0 25 0 14089.0 -1 0 149 785.8999760278122 3139.5707982448484 4 786.1513549685478 MULTI CID FTMS 0 0 0 18696 219328.5625 0.5535349268524593 3 -0.2873382568359375 10 3 TA[NP]{M(Oxidation (M))|F}DDV{I|L}SA{I|L}SD{I|L}HA[HK] 19 -1 130.29 0.0 0.0 4.1499 0.0 0.0 1089.5525623275914 0.0 1089.5525623275914 0.0 100.63814679487832 0.0 0.0 0 1.75 0.0 2.177825934852436 0.0 TA[NP]{M(Oxidation (M))|F}DDV{I|L}SA{I|L}SD{I|L}HA[HK] 4.1499 - 19002 + 1 1.246 194936.4 1.0 12929 5775 18696 HBL1_DMSO_200M_050219_1,18706 HBL1_DMSO_200M_050219_1,18706, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18707 89.557 152.0 903800.0 25 0 60740.0 + 45074 YPYHYAPFL 9 132 585.7852433698017 1169.5559338064031 2 585.7846557497978 MULTI CID FTMS 0 0 0 18696 217921.9375 0.138358204536997 -2 0.1757659912109375 11 Unmodified _YPYHYAPFL_ ENSG00000114127|ENST00000392981|XRN1;ENST00000472697.5_1_3:142095319-142144369:-|nuORF;nc|ENSG00000114127|Q8IZH2|XRN1 67.41302359171755 0.0220989861905124 3 {[WN]|[YH]}YPAYP{M(Oxidation (M))|F}{I|L} 9 4 + 61.336 0.0 0.0 5.2444 5.2444 75.923 0.0 0.0 0.0 3.1972160277101125 15.819035816551562 3.1972160277101125 1.7165906731557357 0 1.274227503252014 0.0 0.0 0.0 {[WN]|[YH]}YPAYP{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}YPYAP{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WN]|[YH]}AYP{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WN]|[YH]}YAP{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}YAPYP{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}AYPYP{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}YPAPY{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}YPPAY{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HYPYP{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}YAPPY{M(Oxidation (M))|F}{I|L} 5.2444;5.0976;4.971;4.8242;4.7296;4.579;4.5595;4.3021;4.2926;4.0447 -;-;-;+;-;-;-;-;-;- + 2889 1 1.246 110035.4 1.0 12930 5775 18696 HBL1_DMSO_200M_050219_1,18707 HBL1_DMSO_200M_050219_1,18707,YPYHYAPFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18708 89.562 278.0 382970.0 25 0 96420.0 + 24913 MPPEPIII 8 119 455.259313833082 908.504074732964 2 455.2604247927666 MULTI CID FTMS 0 0 0 18696 221386.578125 0.4547673027854902 1 -0.0989456176757812 12 Unmodified _MPPEPIII_ ENSG00000066117|ENST00000394963|SMARCD1;nc|ENSG00000066117|Q96GM5-2|SMARCD1 26.34127834903884 0.4900704351052977 3 [EP]PMP{I|L}{I|L}{I|L} 8 2 + 34.87 0.0 0.0 3.8381 3.8381 74.402 0.0 0.0 0.0 3.309932190414244 10.172203223519531 3.309932190414244 3.309932190414244 0 0.8182503180159344 0.0 0.2742275032520141 0.0 [EP]PMP{I|L}{I|L}{I|L};{[HG]|PP}EMP{I|L}{I|L}{I|L};[EP]P{I|L}PM{I|L}{I|L};[EP]PM{I|L}P{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[EP]P{I|L}{I|L}{I|L};[{I|L}P][EP]PM{I|L}{I|L};{[HG]|PP}E{I|L}PM{I|L}{I|L};{[HG]|PP}EM{I|L}P{I|L}{I|L};[EP]P{I|L}MP{I|L}{I|L};[{I|L}P][EP]MP{I|L}{I|L} 3.8381;3.4738;3.0688;2.9816;2.8715;2.8406;2.7044;2.6173;2.5436;2.3154 -;-;-;-;+;-;-;-;-;- + 422 1 1.246 87679.8 1.0 12931 5775 18696 HBL1_DMSO_200M_050219_1,18708 HBL1_DMSO_200M_050219_1,18708,MPPEPIII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18709 89.566 242.0 210060.0 25 0 11181.0 + -1 FTIETEGKTFQL 12 88 707.3663971163635 1412.7182412995269 2 707.3693115115166 MULTI CID FTMS 0 0 0 18696 188671.6875 1.0 0 0.0 13 2 Carbamidomethyl (C) _TLFIFLVC(Carbamidomethyl (C))C(Carbamidomethyl (C))QI_ nc|ENSG00000106105|P41250-2|GARS1;ENSG00000106105|ENST00000389266|GARS1 22.736283301280096 0.5583477779825423 3 ETE{I|L}ET 6 -1 41.643 0.0 0.0 2.9477 0.0 0.0 692.3857505468314 0.0 692.3857505468314 0.0 19.87324485312168 0.0 0.0 0 1.1989700043360187 0.0 0.4247425010840047 0.0 ETE{I|L}ET 2.9477 - 254 1 1.246 44087.1 1.0 12932 5775 18696 HBL1_DMSO_200M_050219_1,18709 HBL1_DMSO_200M_050219_1,18709,TLFIFLVCCQI False False FTIETEGKTFQL 89.566407 707.369311511517 2017949.375 18696.0 nc|ENSG00000106105|P41250-2|GARS1;;ENSG00000106105|ENST00000389266|GARS1 9.648719787597656 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18710 89.581 800.0 260390.0 25 0 26691.0 + -1 VYEMVMYLN 9 228 589.2668806262473 1176.5192083192944 2 589.2693969607353 MULTI CID FTMS 0 0 0 18696 166136.609375 0.313839576608283 5 -0.5376129150390625 14 Oxidation (M) _VYEMVM(Oxidation (M))YLN_ REV__ENSG00000072062|ENST00000308677|PRKACA;REV__ENSG00000142875|ENST00000370685|PRKACB;REV__ENST00000536649.5_1_19:14208073-14223129:-|nuORF;REV__nc|ENSG00000072062|P17612-2|PRKACA;REV__nc|ENSG00000142875|P22694-10|PRKACB;REV__nc|ENSG00000142875|P22694-3|PRKACB;REV__nc|ENSG00000142875|P22694-4|PRKACB;REV__nc|ENSG00000142875|P22694-5|PRKACB;REV__nc|ENSG00000142875|P22694-6|PRKACB;REV__nc|ENSG00000142875|P22694-7|PRKACB;REV__nc|ENSG00000142875|P22694-8|PRKACB;REV__nc|ENSG00000142875|P22694-9|PRKACB;REV__nc|ENSG00000142875|P22694|PRKACB 15.847184025352805 0.4077185912009129 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YNQN{I|L} 7 -1 36.911 0.0 0.0 3.1373 0.0 0.0 0.0 307.0703917511882 307.0703917511882 11.883539791053494 0.0 0.0 0.0 0 0.218765315847925 2.0 0.3252574989159953 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YNQN{I|L} 3.1373 - 4960 1 1.246 154461.4 0.8399999737739563 12933 5775 18696 HBL1_DMSO_200M_050219_1,18710 HBL1_DMSO_200M_050219_1,18710,VYEMVMYLN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18711 89.591 524.0 402960.0 25 0 47517.0 + 42194 KIISLDLPVA 10 200 534.8370944875039 0 534.8369018435478 PEAK CID FTMS 0 0 0 18696 117695.203125 0.8568033204301799 -2 0.1757659912109375 15 Unmodified _VSELLKPLGL_ nc|ENSG00000127481|Q5T4S7-2|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 34.221707139014875 0.1722795930079917 3 {I|L}K{I|L}{I|L}DD 6 7 31.717 0.0 0.0 2.9707 0.0 0.0 285.1689589122854 82.06685053043202 367.2358094427174 0.0 0.0 0.0 0.0 0 0.5 0.0 1.113364334130467 0.0 {I|L}K{I|L}{I|L}DD 2.9707 - 831 + 1 1.246 170777.6 1.0 12934 5775 18696 HBL1_DMSO_200M_050219_1,18711 HBL1_DMSO_200M_050219_1,18711,VSELLKPLGL False False KIISLDLPVA 89.590647 534.836901843548 1266109.0 18696.0 nc|ENSG00000127481|Q5T4S7-2|UBR4;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4 3.9550041357676182 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18712 89.594 147.0 605190.0 25 0 86585.0 + 30641 RFPDFVRDF 9 80 400.2051320102505 1197.5935666309515 3 400.5394164919853 MULTI CID FTMS 0 0 0 18696 117904.1171875 0.1863164763830582 -2 0.1757659912109375 16 Unmodified _RFPDFVRDF_ ENSG00000213339|ENST00000250237|QTRT1;ENST00000587500.5_1_19:10823370-10823943:+|nuORF 41.95555342248728 0.0647214845423414 3 [R{M(Oxidation (M))|F}]PD{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[RD] 9 2 [R{M(Oxidation (M))|F}]P + + 36.782 7.8039 1.9499 3.0713 3.0713 50.348 0.0 0.0 0.0 0.0 24.792293452872308 0.0 0.0 0 0.9247425010840048 0.0 0.25 0.5649093276264391 [R{M(Oxidation (M))|F}]PD{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[RD] 3.0713 - 117 + 1 1.246 75709.7 1.0 12935 5775 18696 HBL1_DMSO_200M_050219_1,18712 HBL1_DMSO_200M_050219_1,18712,RFPDFVRDF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18713 89.602 474.0 406230.0 25 0 78815.0 + 111 AAITILRI 8 134 435.7919453094505 869.569337685701 2 435.7921020388603 MULTI CID FTMS 0 0 0 18696 113144.234375 0.8760026953069239 -2 0.1757659912109375 17 Unmodified _AAITILRI_ ENSG00000120438|ENST00000321394|TCP1;ENST00000414406.2_1_12:20095430-20095949:+|nuORF 57.47134341890925 0.1146309765603773 3 AA{I|L}T{I|L}{I|L}R{I|L} 8 0 + 67.126 0.0 0.0 7.7195 7.7195 85.089 0.0 0.0 0.0 41.271605344752665 14.90463059526342 14.90463059526342 2.865320089195606 0 0.819341519366547 1.3010299956639813 0.3807196863200844 0.0 + + AA{I|L}T{I|L}{I|L}R{I|L};AA{I|L}{I|L}T{I|L}R{I|L};AA{I|L}{I|L}[R{I|L}]T{I|L};AA{I|L}[KQ]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 7.7195;7.39;6.3001;1.3191 +;-;-;- + 386 + 1 1.246 152975.5 1.0 12936 5775 18696 HBL1_DMSO_200M_050219_1,18713 HBL1_DMSO_200M_050219_1,18713,AAITILRI True True AAITILRI 89.601964 435.79210203886 1063809.875 18696.0 ENST00000414406.2_1_12:20095430-20095949:+|nuORF;;ENSG00000120438|ENST00000321394|TCP1 1.6874548594156902 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18715 89.607 32.0 4092100.0 25 0 304830.0 + 25071 MPVIPMNTI 9 116 508.2690081828018 1014.5234634324036 2 508.2697021365166 MULTI CID FTMS 0 0 0 18714 1179374.5 0.0445157716213784 5 -0.5585708618164062 1 Unmodified _MPVIPMNTI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 74.39630413441286 0.0193995060682538 3 [VP]M{I|L}PMNT{I|L} 9 2 + 62.33 0.0 0.0 6.1437 6.1437 81.149 0.0 0.0 0.0 14.247425010840049 9.889917747712644 9.889917747712644 3.0102999566398125 0 1.1237125054200234 1.5228787452803376 0.0 0.0 [VP]M{I|L}PMNT{I|L};[VP]{I|L}MPMNT{I|L};[VP]M{I|L}PNMT{I|L};[VP]M{I|L}PMGGT{I|L};[VP]{I|L}MPNMT{I|L};[VP]MP{I|L}MNT{I|L};[VP]{I|L}MPMGGT{I|L};[VP]{I|L}PMMNT{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}PMNT{I|L};[VP]M{I|L}PN[{I|L}T]M 6.1437;5.847;5.4548;5.2361;5.158;4.9662;4.9394;4.8136;4.7394;4.6916 -;-;-;-;-;-;-;-;+;- + 936 1 1.246 107229.2 1.0 12937 5776 18714 HBL1_DMSO_200M_050219_1,18715 HBL1_DMSO_200M_050219_1,18715,MPVIPMNTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18716 89.608 44.0 4906400.0 25 0 722040.0 + 9184 FGGVLILIHR 10 110 375.5692990116058 1123.6860676350177 3 375.5692626833916 MULTI CID FTMS 0 0 0 18714 690667.875 0.0192979703581458 6 -0.6558456420898438 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 64.23631603340823 0.0254735623525308 3 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 108.0 0.0 0.0 9.6112 9.6112 94.855 0.0 0.0 0.0 27.147642715192504 11.989700043360187 11.989700043360187 9.208187539523747 0 1.0994850021680094 2.0 0.0 2.2390690719683093 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}RH;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}RH 9.6112;8.7917;8.5442;7.7247 -;-;-;- 328 + 1 1.246 176154.4 1.0 12938 5776 18714 HBL1_DMSO_200M_050219_1,18716 HBL1_DMSO_200M_050219_1,18716,FGGVLILIHR True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18717 89.609 36.0 6596400.0 25 0 1109800.0 + 26517 NVIDNLIVA 9 108 485.78227411203727 969.5499952908746 2 485.7821533083916 MULTI CID FTMS 0 0 0 18714 1768613.125 0.0146691661044882 -4 0.4063491821289062 3 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 56.17704186161178 0.0281986971544335 3 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN{I|L}VA 9 4 + 70.138 0.0 0.0 7.2341 7.2341 84.944 0.0 0.0 0.0 7.526202187463078 8.384767769392731 7.526202187463078 3.2610222202119417 0 0.7742275032520141 1.0 0.8684151806525389 1.5629529932484498 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}DVN{I|L}{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}NV{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}VEVN{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}DNV{I|L}{I|L}VA;[{I|L}V]NEVN{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DVN{I|L}VA;{[NV]|[RG]}E{I|L}VN{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VGG{I|L}VA;[{I|L}V]QDVN{I|L}VA 7.2341;6.8977;6.7548;6.6085;6.574;6.4578;6.4269;6.3315;6.2843;6.2762 -;-;-;-;-;-;-;-;-;- 3730 1 1.246 184720.3 1.0 12939 5776 18714 HBL1_DMSO_200M_050219_1,18717 HBL1_DMSO_200M_050219_1,18717,NVIDNLIVA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18718 89.61 38.0 5904800.0 25 0 474020.0 + 29868 QQVQRLPFL 9 125 564.8299374651045 1127.645321997009 2 564.8300048708916 MULTI CID FTMS 0 0 0 18714 1425730.5 0.2916809491529168 -1 0.0989456176757812 4 Unmodified _QQVQRLPFL_ ENSG00000132963|ENST00000380842|POMP 147.8311659463005 0.0308244065875608 3 [AG]QVQR{I|L}P{M(Oxidation (M))|F}{I|L} 10 2 + 84.013 0.0 0.0 7.4503 7.4503 91.346 0.0 0.0 0.0 38.853969316269925 15.026975159433531 15.026975159433531 9.164539485499247 0 2.5114393726401687 1.2218487496163564 0.0 0.535666875892183 [AG]QVQR{I|L}P{M(Oxidation (M))|F}{I|L};[AG][AG]VQR{I|L}P{M(Oxidation (M))|F}{I|L};[AG]QV[AG]R{I|L}P{M(Oxidation (M))|F}{I|L};[AG][AG]V[AG]R{I|L}P{M(Oxidation (M))|F}{I|L};[AG]RVQQ{I|L}P{M(Oxidation (M))|F}{I|L};[AG]VRQQ{I|L}P{M(Oxidation (M))|F}{I|L};[AG]QV[HK][KT]{M(Oxidation (M))|F}{I|L};[AG]RV{I|L}QQP{M(Oxidation (M))|F}{I|L};[AG]VR{I|L}QQP{M(Oxidation (M))|F}{I|L};[AG]R{I|L}VQQP{M(Oxidation (M))|F}{I|L} 7.4503;6.6376;6.6376;5.8281;5.1082;4.9974;4.8661;4.4884;4.3776;4.1621 -;-;-;-;-;-;-;-;-;- 1962 + 1 1.246 179149.1 1.0 12940 5776 18714 HBL1_DMSO_200M_050219_1,18718 HBL1_DMSO_200M_050219_1,18718,QQVQRLPFL True True QQVQRLPFL 89.610432 564.830004870892 169759380.0 18714.0 ENSG00000132963|ENST00000380842|POMP 8.18483304977417 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18719 89.612 65.0 2514900.0 25 0 225710.0 + 34915 SQIISLQTL 9 143 501.7951633006509 1001.575773668102 2 501.7950927615166 MULTI CID FTMS 0 0 0 18714 654654.125 0.3153389782339683 2 -0.1883926391601562 5 Unmodified _SQIISLQTL_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF 75.76082778847304 0.0188720312721366 3 {[QS]|[NT]}{I|L}{I|L}T{I|L}{I|L}{[QS]|[NT]} 9 3 + 63.597 0.0 0.0 6.3497 6.3497 86.289 0.0 0.0 0.0 6.756758919119569 7.147642715192504 6.756758919119569 6.756758919119569 0 0.0 0.744727494896694 1.0920376344600455 0.8116042352767734 {[QS]|[NT]}{I|L}{I|L}T{I|L}{I|L}{[QS]|[NT]};[{I|L}T]N{I|L}T{I|L}{I|L}{[QS]|[NT]};[{I|L}T]QVT{I|L}{I|L}{[QS]|[NT]};{[TV]|[{I|L}S]}Q{I|L}T{I|L}{I|L}{[QS]|[NT]};[AG]S{I|L}{I|L}T{I|L}{I|L}{[QS]|[NT]};{[QS]|[NT]}{I|L}T{I|L}{I|L}{I|L}{[QS]|[NT]};[{I|L}T]Q{I|L}S{I|L}{I|L}{[QS]|[NT]};[{I|L}T]VQT{I|L}{I|L}{[QS]|[NT]};[Q{I|L}]S{I|L}T{I|L}{I|L}{[QS]|[NT]};{[TV]|[{I|L}S]}{I|L}QT{I|L}{I|L}{[QS]|[NT]} 6.3497;5.6751;5.5543;5.5223;5.223;5.143;5.1218;4.6736;4.6098;4.5208 -;-;-;-;-;-;-;-;-;- 1592 1 1.246 128460.1 1.0 12941 5776 18714 HBL1_DMSO_200M_050219_1,18719 HBL1_DMSO_200M_050219_1,18719,SQIISLQTL True True SQIISLQTL 89.612003 501.795092761517 18017388.0 18714.0 ENSG00000171490|ENST00000571133|RSL1D1;;ENST00000396503.7_1_16:11931646-11945380:-|nuORF 4.939850012461345 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18720 89.614 96.0 2961700.0 25 0 375140.0 + 9994 FPITALREI 9 129 530.3135998751043 1058.6126468170085 2 530.3137695193291 MULTI CID FTMS 0 0 0 18714 526117.4375 0.2662591874657365 2 -0.1883926391601562 6 Unmodified _FPITALREI_ ENSG00000136807|ENST00000373264|CDK9;nc|ENSG00000136807|P50750-2|CDK9 83.42873516780209 0.0166860047644719 3 {M(Oxidation (M))|F}P{I|L}TA{I|L}RE{I|L} 9 0 + 78.154 0.0 0.0 7.3827 7.3827 90.308 0.0 0.0 0.0 35.554992057176406 6.677749567895376 6.677749567895376 8.139029924677757 0 1.805945812348389 0.0 1.110924374808178 0.25 + + {M(Oxidation (M))|F}P{I|L}TA{I|L}RE{I|L};{M(Oxidation (M))|F}P{I|L}TA{I|L}[W{I|L}]V;[{I|L}T]AR{M(Oxidation (M))|F}{I|L}{I|L}PE;{M(Oxidation (M))|F}P{I|L}TA{I|L}[KG]NV;[{I|L}T]AR{I|L}{M(Oxidation (M))|F}{I|L}PE;{M(Oxidation (M))|F}{I|L}PTA{I|L}RE{I|L};{I|L}{I|L}[R{M(Oxidation (M))|F}]AT{I|L}PE;{M(Oxidation (M))|F}P{I|L}TA{I|L}[KG]GGV;{M(Oxidation (M))|F}{I|L}PTA{I|L}[W{I|L}]V;{M(Oxidation (M))|F}P{I|L}T[{I|L}P]PK{M(Oxidation (M))|F} 7.3827;6.6138;6.5394;6.4692;6.1917;6.1042;5.561;5.4155;5.3354;5.2896 +;-;-;-;-;-;-;-;-;- + 3593 + 1 1.246 230711.3 1.0 12942 5776 18714 HBL1_DMSO_200M_050219_1,18720 HBL1_DMSO_200M_050219_1,18720,FPITALREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18721 89.623 481.0 905690.0 25 0 67105.0 + 17281 KLQEFLQTL 9 238 560.325224747011 1118.635896560822 2 560.3251220583916 MULTI CID FTMS 0 0 0 18714 163175.203125 0.0530326317656537 3 -0.2989273071289062 7 Unmodified _KLQEFLQTL_ ENSG00000140525|ENST00000310775|FANCI;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-4|FANCI 85.64151623876279 0.0161498729896241 3 [{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}QT{I|L} 10 3 + 70.212 0.0 0.0 6.2766 6.2766 77.595 0.0 0.0 0.0 7.722477738884592 1.6722687557546578 1.6722687557546578 0.5765125873896295 0 1.004432191740108 1.2218487496163564 1.7728787452803374 1.055462187404089 [{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}QT{I|L};[{I|L}T]Q{M(Oxidation (M))|F}R{I|L}QT{I|L};[AG]{I|L}KE{M(Oxidation (M))|F}{I|L}QT{I|L};[{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}[AG]T{I|L};{[TV]|[{I|L}S]}AA{M(Oxidation (M))|F}R{I|L}QT{I|L};[{I|L}T]Q{M(Oxidation (M))|F}R{I|L}[AG]T{I|L};[{I|L}T]Q{M(Oxidation (M))|F}[VG]{I|L}QT{I|L};{[TV]|[{I|L}S]}Q{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}QT{I|L};[AG]{I|L}T{M(Oxidation (M))|F}R{I|L}QT{I|L};{[TV]|[{I|L}S]}P[YG]K{I|L}QT{I|L} 6.2766;6.225;5.5862;5.4573;5.4441;5.4019;5.4019;5.2903;5.2891;5.2736 -;-;-;-;-;-;-;-;-;- 25510 1 1.246 322029.4 1.0 12943 5776 18714 HBL1_DMSO_200M_050219_1,18721 HBL1_DMSO_200M_050219_1,18721,KLQEFLQTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18722 89.636 800.0 535020.0 25 0 73801.0 + 28587 PTVPELTL 8 220 435.2525437444794 868.4905345557588 2 435.2523376345634 MULTI CID FTMS 0 0 0 18714 148377.65625 0.3791525867797098 -1 0.0989456176757812 8 Unmodified _PTVPELTL_ REV__ENSG00000170085|ENST00000429602|SIMC1;REV__nc|ENSG00000170085|Q8NDZ2|SIMC1 63.562846038646086 0.116059504757595 3 [{I|L}P]SPE{I|L}T{I|L} 8 -1 + 34.779 0.0 0.0 4.0046 4.0046 72.453 0.0 0.0 0.0 0.2672818027831098 0.8294088079428974 0.2672818027831098 1.8709223633790515 0 0.7429928190999391 1.5228787452803376 1.3807196863200843 0.0 [{I|L}P]SPE{I|L}T{I|L};[{I|L}P]S{I|L}PET{I|L};[{I|L}P]SP{I|L}ET{I|L};[{I|L}P]S{I|L}TPE{I|L};[{I|L}P]S{I|L}T{I|L}[EP];[{I|L}P]PSE{I|L}T{I|L};[{I|L}P]S{I|L}PTE{I|L};[{I|L}P]SP{I|L}TE{I|L};{[TV]|[{I|L}S]}PPE{I|L}T{I|L};[{I|L}P]PS{I|L}ET{I|L} 4.0046;3.7891;3.633;3.598;3.3573;3.1689;3.1464;2.9903;2.9186;2.7973 -;-;-;-;-;-;-;-;-;- 1174 1 1.246 325472.1 0.5600000023841858 12944 5776 18714 HBL1_DMSO_200M_050219_1,18722 HBL1_DMSO_200M_050219_1,18722,PTVPELTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18723 89.65 800.0 982060.0 25 0 112790.0 + 18301 KVLDILQHI 9 259 539.8346588658509 1077.6547647985017 2 539.8343994021416 MULTI CID FTMS 0 0 0 18714 130738.78125 0.0961966459439839 -1 0.0989456176757812 9 Unmodified _KVLDILQHI_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 240.95378622507505 7.861659767574229e-62 3 KV{I|L}D{I|L}{I|L}QH{I|L} 9 0 + 127.75 0.0 0.0 11.855 11.855 92.11 0.0 0.0 0.0 25.68636235841012 6.210371462279738 6.210371462279738 6.210371462279738 0 3.4361818737241734 0.9208187539523752 1.0044321917401078 1.3996498648046138 + + KV{I|L}D{I|L}{I|L}QH{I|L};KV{I|L}D{I|L}{I|L}Q{I|L}H;KV{I|L}{I|L}D{I|L}QH{I|L};KV{I|L}{I|L}D{I|L}Q{I|L}H;KV{I|L}D{I|L}{I|L}[AG]H{I|L};K{I|L}VD{I|L}{I|L}QH{I|L};KV{I|L}D{I|L}{I|L}[AG]{I|L}H;K{I|L}VD{I|L}{I|L}Q{I|L}H;KV{I|L}{I|L}D{I|L}[AG]H{I|L};{I|L}KVD{I|L}{I|L}QH{I|L} 11.855;11.278;10.587;10.011;9.7015;9.5031;9.1252;8.9268;8.6764;8.4681 +;-;-;-;-;-;-;-;-;- + 14965 + 1 1.246 577742.8 0.5799999833106995 12945 5776 18714 HBL1_DMSO_200M_050219_1,18723 HBL1_DMSO_200M_050219_1,18723,KVLDILQHI True True KVLDILQHI 89.650259 539.834399402142 10527569.0 18714.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 6.877266724904378 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18724 89.658 409.0 572400.0 25 0 26894.0 + 6295 DVDQQTFNHQL 11 161 672.8106228912221 1343.6066928492442 2 672.8109619021416 MULTI CID FTMS 0 0 0 18714 130410.03125 0.0762588949684696 2 -0.1883926391601562 10 Unmodified _DVDQQTFNHQL_ REV__ENSG00000164946|ENST00000380880|FREM1;REV__nc|ENSG00000164946|Q5H8C1-2|FREM1 17.11289562659939 0.6791789249425932 3 {NN|[MP]|[D{I|L}]|[EV]}PDVAGA[WC(Carbamidomethyl (C))]Q{I|L} 12 -1 + 51.605 0.0 0.0 3.8408 3.8408 74.216 0.0 0.0 0.0 9.055075120612663 3.089896095112259 3.089896095112259 3.089896095112259 0 0.6237125054200234 1.3010299956639813 0.7600012904178959 0.2396518287104437 {NN|[MP]|[D{I|L}]|[EV]}PDVAGA[WC(Carbamidomethyl (C))]Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}PDVAGA[QP]{M(Oxidation (M))|F}{[QS]|[NT]};{NN|[MP]|[D{I|L}]|[EV]}PDAVGA[WC(Carbamidomethyl (C))]Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}PDVQA[WC(Carbamidomethyl (C))]Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}PDVAGAWW{[QS]|[NT]};{NN|[MP]|[D{I|L}]|[EV]}PDAVGA[QP]{M(Oxidation (M))|F}{[QS]|[NT]};{NN|[MP]|[D{I|L}]|[EV]}PDVAQ[WC(Carbamidomethyl (C))]Q{I|L};[DV]PEVAGA[QP]{M(Oxidation (M))|F}{[QS]|[NT]};{NN|[MP]|[D{I|L}]|[EV]}PDVAGA[QP]C{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{NN|[MP]|[D{I|L}]|[EV]}PDVQA[QP]{M(Oxidation (M))|F}{[QS]|[NT]} 3.8408;3.6108;3.5446;3.3487;3.3405;3.3146;3.1703;3.1669;3.1627;3.1165 -;-;-;-;-;-;-;-;-;- 6902 1 1.246 171255.3 1.0 12946 5776 18714 HBL1_DMSO_200M_050219_1,18724 HBL1_DMSO_200M_050219_1,18724,DVDQQTFNHQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18725 89.671 800.0 511460.0 25 0 72273.0 + 45757 YYISPRLTF 9 203 580.3108966406983 1158.6072403481965 2 580.3107177615166 MULTI CID FTMS 0 0 0 18714 127218.9921875 0.0035965048149642 13 -1.4187545776367188 11 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 72.96794272382148 0.0199516581995792 3 YY{I|L}S{M(Oxidation (M))|F}[RP]T{I|L} 9 3 + 80.395 0.0 0.0 6.939 6.939 83.22 0.0 0.0 0.0 27.947186190920675 2.950805996590504 2.950805996590504 2.950805996590504 0 0.7742275032520141 2.0 1.4987048718740548 0.3807196863200844 YY{I|L}S{M(Oxidation (M))|F}[RP]T{I|L};YY{I|L}SPV[YR]V;YY{I|L}S[R{I|L}]MT{I|L};YY{I|L}S[R{I|L}][TP]{M(Oxidation (M))|F};YY{I|L}SPV{I|L}H[PA];YY{I|L}{M(Oxidation (M))|F}S[RP]T{I|L};YY{M(Oxidation (M))|F}{I|L}S[RP]T{I|L};YY{I|L}{M(Oxidation (M))|F}[KQ]{[QG]|[NA]}{I|L};YY{I|L}{M(Oxidation (M))|F}[KQ]{I|L}{[QG]|[NA]};YY{I|L}{M(Oxidation (M))|F}[KQ][QA]V 6.939;6.6843;6.4694;6.3516;5.8593;5.7319;5.1495;3.9368;3.6723;3.5076 -;-;-;-;-;-;-;-;-;- 3332 + 1 1.246 299454.7 0.5799999833106995 12947 5776 18714 HBL1_DMSO_200M_050219_1,18725 HBL1_DMSO_200M_050219_1,18725,YYISPRLTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18726 89.685 800.0 607230.0 25 0 89993.0 + 18697 LAIWEASL 8 196 451.75254133747273 901.4905297417456 2 451.7528564333916 MULTI CID FTMS 0 0 0 18714 111803.0625 0.004791887449619 45 -4.82879638671875 12 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 70.71552829651908 0.111000043122623 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPAS{I|L}A{I|L} 9 6 + 65.134 0.0 0.0 7.2251 7.2251 81.831 0.0 0.0 0.0 1.8455074845850703 3.3573403140956515 1.8455074845850703 1.479400086720375 0 0.3807196863200844 0.8239087409443188 1.579689690656103 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPAS{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPASA{I|L}{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PASA{I|L}{I|L};[PS]P{M(Oxidation (M))|F}ASA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAPS{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAPSA{I|L}{I|L};[PS]{M(Oxidation (M))|F}APS{I|L}A{I|L};[PS]{M(Oxidation (M))|F}APSA{I|L}{I|L} 7.2251;7.061;7.0204;7.0204;6.8563;6.8563;6.8077;6.6436;6.603;6.4389 -;-;-;-;-;-;-;-;-;- 3198 1 1.246 371176.5 0.4900000095367431 12948 5776 18714 HBL1_DMSO_200M_050219_1,18726 HBL1_DMSO_200M_050219_1,18726,LAIWEASL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18728 89.69 16.0 2661200.0 25 0 123820.0 + 45528 YTVEDLATQL 10 83 576.7920728341842 1151.5695927351685 2 576.7922241091728 MULTI CID FTMS 0 0 0 18727 4320345.5 1.0 0 0.0 1 Unmodified _YTVEDLATQL_ ENSG00000124571|ENST00000265351|XPO5 43.85829265575387 0.1168243637355526 3 {NN|[MP]|[D{I|L}]|[EV]}DTY{I|L} 6 5 29.429 0.0 0.0 2.5556 0.0 0.0 0.0 428.2131223584683 428.2131223584683 13.74298247225546 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.8494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}DTY{I|L} 2.5556 - 207 1 1.261 39828.9 1.0 12949 5777 18727 HBL1_DMSO_200M_050219_1,18728 HBL1_DMSO_200M_050219_1,18728,YTVEDLATQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18729 89.691 24.0 3529800.0 25 0 394150.0 + 29242 QGWECLFI 8 105 498.2380715387701 994.4615901443402 2 498.2381774783134 MULTI CID FTMS 0 0 0 18727 2624443.25 1.0 0 0.0 2 Unmodified _QGWECLFI_ ENST00000367660.3_1_6:139364265-139364322:+|nuORF 23.1484247019978 0.5573009939494978 3 {[QG]|[NA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SAN{M(Oxidation (M))|F}{I|L} 9 5 + 27.731 0.0 0.0 2.7885 2.7885 78.903 0.0 0.0 0.0 5.430599746173218 9.314178132293453 5.430599746173218 9.208187539523752 0 0.7429928190999391 1.6989700043360187 0.0 0.0 {[QG]|[NA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SAN{M(Oxidation (M))|F}{I|L};{[QG]|[NA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SAGG{M(Oxidation (M))|F}{I|L};GGA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SAN{M(Oxidation (M))|F}{I|L};GGA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SAGG{M(Oxidation (M))|F}{I|L};{[QG]|[NA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]};[VP]M{[CT]|[{M(Oxidation (M))|F}G]}AN{M(Oxidation (M))|F}{I|L} 2.7885;1.8626;1.2514;0.3298;0.23549;0.074498 -;-;-;-;-;- 357 1 1.261 68423.8 1.0 12950 5777 18727 HBL1_DMSO_200M_050219_1,18729 HBL1_DMSO_200M_050219_1,18729,QGWECLFI False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18730 89.692 65.0 1164900.0 25 0 92571.0 + 24244 MAPLALHL 8 76 433.2510418859958 864.4875308387916 2 433.2513000369072 MULTI CID FTMS 0 0 0 18727 893067.75 0.8422714138688377 2 -0.21600341796875 3 Unmodified _MAPLALHL_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1 32.45364647766026 0.3613649037604678 3 {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L} 8 0 + 60.597 0.0 0.0 7.0096 7.0096 95.186 0.0 0.0 0.0 15.982587709797327 11.013874343345194 11.013874343345194 60.59685037172876 0 0.3252574989159953 2.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L} 7.0096 + + 92 + 1 1.261 62497.6 1.0 12951 5777 18727 HBL1_DMSO_200M_050219_1,18730 HBL1_DMSO_200M_050219_1,18730,MAPLALHL False True MAPLALHL 89.692433 433.251300036907 16933594.0 18727.0 ENSG00000104951|ENST00000391826|IL4I1;;chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1 7.894974708557129 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18731 89.694 90.0 3175900.0 25 0 757590.0 + 30208 QVVVDPKP 8 105 441.2579069695686 880.5012610059372 2 441.2583801150322 MULTI CID FTMS 0 0 0 18727 667739.75 0.2387039081461126 -3 0.307342529296875 4 Unmodified _QVVVDPKP_ REV__ENSG00000067177|ENST00000373542|PHKA1;REV__nc|ENSG00000067177|P46020-2|PHKA1;REV__nc|ENSG00000067177|P46020-3|PHKA1 26.88365393820708 0.4786498634179528 3 [{I|L}V]{I|L}NVES 7 -1 46.472 0.0 0.0 5.2779 0.0 0.0 0.0 123.05692468814686 123.05692468814686 10.410811344623063 0.0 0.0 0.0 0 0.2302046884880938 0.8860566476931632 0.2614393726401688 0.8494850021680094 [{I|L}V]{I|L}NVES 5.2779 - 1919 + 1 1.261 222550.2 1.0 12952 5777 18727 HBL1_DMSO_200M_050219_1,18731 HBL1_DMSO_200M_050219_1,18731,QVVVDPKP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18732 89.696 91.0 755890.0 25 0 121700.0 29528 QLLYVYHL 8 96 524.7943569755977 1047.5741610179953 2 524.7939941287041 MULTI CID FTMS 0 0 0 18727 556360.75 0.1977317003087199 -2 0.1818695068359375 5 Unmodified _QLLYVYHL_ ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23 28.17323086031832 0.4514957916281387 3 [Q{I|L}]{I|L} 3 5 30.427 0.0 0.0 2.9046 0.0 0.0 0.0 690.3244716471546 690.3244716471546 13.260397417655655 0.0 0.0 0.0 0 0.9247425010840048 0.8860566476931632 0.0 0.4247425010840047 + [Q{I|L}]{I|L} 2.9046 + + 201 1 1.261 57326.4 1.0 12953 5777 18727 HBL1_DMSO_200M_050219_1,18732 HBL1_DMSO_200M_050219_1,18732,QLLYVYHL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18733 89.699 144.0 376910.0 25 0 22408.0 + 9364 FIPLPSAVVQA 11 83 571.3346470228514 1140.6547411125027 2 571.3347656130791 MULTI CID FTMS 0 0 0 18727 501440.71875 1.0 0 0.0 6 Unmodified _FIPLPSAVVQA_ nc|ENSG00000100445|Q9NRG7-3|SDR39U1;ENSG00000100445|ENST00000399395|SDR39U1 20.41453444215458 0.6105011870913812 3 [{I|L}P][PS]AVV 7 4 14.982 0.0 0.0 1.3135 0.0 0.0 0.0 474.2347357157061 474.2347357157061 2.2792515798050754 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 + [{I|L}P][PS]AVV 1.3135 + + 169 1 1.261 49468.8 1.0 12954 5777 18727 HBL1_DMSO_200M_050219_1,18733 HBL1_DMSO_200M_050219_1,18733,FIPLPSAVVQA False False FIPLPSAVVQA 89.699342 571.334765613079 3021557.75 18727.0 nc|ENSG00000100445|Q9NRG7-3|SDR39U1;;ENSG00000100445|ENST00000399395|SDR39U1 4.110764344533284 2.0 True 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18734 89.703 201.0 491340.0 25 0 16987.0 -1 0 114 957.96068329226 1913.90681365132 2 957.9615356326104 MULTI CID FTMS 0 0 0 18727 479419.71875 1.0 0 0.0 7 3 [MN]PN{I|L}NAD{I|L}[DV][HA]YQS{I|L} 17 -1 + 83.576 0.0 0.0 4.3668 4.3668 72.971 0.0 0.0 0.0 38.38863515440971 13.772694928780725 13.772694928780725 1.6749108729376303 0 1.555462187404089 1.6989700043360187 0.805462187404089 0.7302046884880937 [MN]PN{I|L}NAD{I|L}[DV][HA]YQS{I|L};[MN]PN{I|L}NAD[RK][HN]YQS{I|L};[MN]P{I|L}NNAD{I|L}[DV][HA]YQS{I|L};[MN]PN{I|L}NAD[C(Carbamidomethyl (C))K]N{I|L}[DV]PS{I|L};[MN]P{I|L}NNAD[RK][HN]YQS{I|L};[MN]PN{I|L}NW{I|L}[DV][HA]YQS{I|L};[MN]P{I|L}NNAD[C(Carbamidomethyl (C))K]N{I|L}[DV]PS{I|L};[MN]P{I|L}NNW{I|L}[DV][HA]YQS{I|L};[MN]PN{I|L}NW[C(Carbamidomethyl (C))K]N{I|L}[DV]PS{I|L};[MN]PN{I|L}NAD[C(Carbamidomethyl (C))K]NEVVPS{I|L} 4.3668;4.2792;4.2747;4.2375;4.1872;4.1726;4.1454;4.0806;4.0433;4.0015 -;-;-;-;-;-;-;-;-;- 4717 + 1 1.261 68918.9 1.0 12955 5777 18727 HBL1_DMSO_200M_050219_1,18734 HBL1_DMSO_200M_050219_1,18734, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18735 89.706 156.0 359280.0 25 0 27841.0 + 41889 VQCETLEDLKI 11 90 645.8344303325755 1289.654307731951 2 645.8341552615166 MULTI CID FTMS 0 0 0 18727 440539.625 1.0 0 0.0 8 Unmodified _VQCETLEDLKL_ ENSG00000147614|ENST00000285393|ATP6V0D2 44.391923383255 0.1486875248750151 3 {[QV]|[N{I|L}]|[RA]|[KV]}CET{I|L}ED{I|L}K{I|L} 11 0 {[QV]|[N{I|L}]|[RA]|[KV]} + + 56.085 19.934 8.7765 4.3489 4.3489 53.572 0.0 0.0 0.0 0.0 32.04509544465793 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.4247425010840047 + + {[QV]|[N{I|L}]|[RA]|[KV]}CET{I|L}ED{I|L}K{I|L} 4.3489 + + 411 + 1 1.261 50459.9 1.0 12956 5777 18727 HBL1_DMSO_200M_050219_1,18735 HBL1_DMSO_200M_050219_1,18735,VQCETLEDLKL False True VQCETLEDLKI 89.706319 645.834155261517 3484572.25 18727.0 ENSG00000147614|ENST00000285393|ATP6V0D2 6.062684694925944 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18736 89.709 120.0 559680.0 25 0 119280.0 + 41556 VPPEAILL 8 88 426.2648951914162 850.5152374496324 2 426.2652465701103 MULTI CID FTMS 0 0 0 18727 407624.65625 0.6710467370762174 3 -0.355743408203125 9 Unmodified _VPPEAILL_ ENSG00000182973|ENST00000328834|CNOT10;nc|ENSG00000182973|Q9H9A5-2|CNOT10;nc|ENSG00000182973|Q9H9A5-3|CNOT10;nc|ENSG00000182973|Q9H9A5-4|CNOT10;nc|ENSG00000182973|Q9H9A5-5|CNOT10;nc|ENSG00000182973|Q9H9A5-6|CNOT10 26.34127834903884 0.4900704351052977 3 {[HG]|PP}EA{I|L}V{I|L}{I|L} 8 2 + 27.612 0.0 0.0 3.2465 3.2465 72.323 0.0 0.0 0.0 2.4742501084004687 11.158650111567638 2.4742501084004687 3.0102999566398125 0 0.4247425010840047 0.0 0.0 0.0 {[HG]|PP}EA{I|L}V{I|L}{I|L};{[HG]|PP}EAV{I|L}{I|L}{I|L};[VP][DV]PV{I|L}{I|L};{[HG]|PP}EVA{I|L}{I|L}{I|L};{[HG]|PP}EA{I|L}{I|L}[{I|L}V];[VP][EP]A{I|L}{I|L}{I|L};[{I|L}P]{[CP]|[EA]}PV{I|L}{I|L};[VP][DV]P{I|L}[{I|L}V];[{I|L}P][DP]A{I|L}{I|L}{I|L};[{I|L}P]{[CP]|[EA]}P{I|L}[{I|L}V] 3.2465;2.8926;2.8654;2.5387;2.3932;2.3646;2.1326;2.0121;1.6318;1.2793 -;-;-;-;-;+;-;-;-;- + 142 1 1.261 60710.1 1.0 12957 5777 18727 HBL1_DMSO_200M_050219_1,18736 HBL1_DMSO_200M_050219_1,18736,VPPEAILL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18737 89.711 99.0 565810.0 25 0 68194.0 + 35788 SVIQDFVKM 9 97 533.7842577940803 1065.5539626549603 2 533.7847167849541 MULTI CID FTMS 0 0 0 18727 411120.46875 1.0 0 0.0 10 Unmodified _SVIQDFVKM_ ENSG00000163320|ENST00000482016|CGGBP1 34.40172386719151 0.1061884637610825 3 [VS]{I|L}QY[TP]KM 9 3 + 60.267 0.0 0.0 5.656 5.656 86.579 0.0 0.0 0.0 39.33272030746111 11.706962271689749 11.706962271689749 9.208187539523747 0 0.4247425010840047 2.0 0.3494850021680094 0.6203715150305281 [VS]{I|L}QY[TP]KM;[VS]{I|L}[AG]Y[TP]KM;[VS]{I|L}QY{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L};[VS]{I|L}Q[KP][YT]M;[VS]{I|L}[AG]Y{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L};TVVQY[TP]KM;[VS][WP][YR]KM;T[KS]{M(Oxidation (M))|F}{I|L}[DP]KM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KS]YQ{I|L}[PA];T[KS]{[C(Carbamidomethyl (C))G]|[NC]}RVKM 5.656;4.7918;4.519;3.8629;3.6548;3.0979;3.0028;2.0705;1.9951;1.9648 -;-;-;-;-;-;-;-;-;- 399 + 1 1.261 47676.8 1.0 12958 5777 18727 HBL1_DMSO_200M_050219_1,18737 HBL1_DMSO_200M_050219_1,18737,SVIQDFVKM True True SVIQDFVKM 89.710946 533.784716784954 3107675.75 18727.0 ENSG00000163320|ENST00000482016|CGGBP1 6.343235015869141 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18738 89.715 185.0 245220.0 25 0 25150.0 + 22102 LPPPVFQM 8 76 464.7509811866896 927.4874094401792 2 464.7516052126884 MULTI CID FTMS 0 0 0 18727 341515.625 0.6831986763756293 9 -1.0714263916015625 11 Unmodified _LPPPVFQM_ ENSG00000173726|ENST00000366607|TOMM20;ENST00000534518.1_1_11:77024925-77025045:+|nuORF 32.45364647766026 0.3613649037604678 3 [{I|L}P]PPV{M(Oxidation (M))|F}QM 8 0 + 35.578 0.0 0.0 3.836 3.836 76.258 0.0 0.0 0.0 7.7815125038364386 8.667053245199625 7.7815125038364386 4.771212547196626 0 0.3182503180159344 1.6989700043360187 0.0 0.0 + + [{I|L}P]PPV{M(Oxidation (M))|F}QM;[{I|L}P]{[ET]|[MV]}{I|L}PQM;[{I|L}P]{[ET]|[MV]}P{I|L}QM;[VP]PP{I|L}{M(Oxidation (M))|F}QM;[YN]{M(Oxidation (M))|F}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]P{M(Oxidation (M))|F}{I|L}PQM;[VP]P{M(Oxidation (M))|F}P{I|L}QM;[VP]PP{M(Oxidation (M))|F}{I|L}QM;[{I|L}P]P{[ET]|[MV]}{I|L}QM;[YN]{M(Oxidation (M))|F}{I|L}[K{I|L}]M 3.836;3.3216;3.3216;2.997;2.8018;2.6724;2.6724;2.6724;2.5679;2.4772 +;-;-;-;-;-;-;-;-;- + 126 1 1.261 40466.4 1.0 12959 5777 18727 HBL1_DMSO_200M_050219_1,18738 HBL1_DMSO_200M_050219_1,18738,LPPPVFQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18739 89.717 102.0 449580.0 25 0 40305.0 + 27231 PGMPPGIPPLM 11 87 553.7913493282846 0 553.7910644412041 PEAK CID FTMS 0 0 0 18727 335754.65625 0.553383856207898 -7 0.6427230834960938 12 Unmodified _PGMPPGIPPLM_ ENSG00000010244|ENST00000394670|ZNF207;ENST00000577324.1_1_17:30677304-30687987:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207 15.847184025352805 0.3962645171176329 3 PP{I|L} 3 8 13.416 0.0 0.0 1.2135 0.0 0.0 649.3273643944443 146.02852808170158 795.3558924761459 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + PP{I|L} 1.2135 + + 43 + 1 1.261 43136.7 1.0 12960 5777 18727 HBL1_DMSO_200M_050219_1,18739 HBL1_DMSO_200M_050219_1,18739,PGMPPGIPPLM False True PGMPPGIPPLM 89.71671 553.791064441204 41228032.0 18727.0 ENSG00000010244|ENST00000394670|ZNF207;;nc|ENSG00000010244|O43670-3|ZNF207;;nc|ENSG00000010244|O43670-2|ZNF207;;ENST00000577324.1_1_17:30677304-30687987:+|nuORF;;nc|ENSG00000010244|O43670|ZNF207 2.5974583625793457 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18740 89.72 174.0 2319500.0 25 0 187830.0 + 35427 STLHLVLRL 9 153 351.2258024463099 1050.6555779391297 3 351.2259094119072 MULTI CID FTMS 0 0 0 18727 311602.0625 0.0077391311750208 -3 0.307342529296875 13 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 71.92227651296345 0.0203558744033348 3 ST{I|L}H{I|L}V{I|L}{I|L}R 9 2 + 94.414 0.0 0.0 8.9862 8.9862 86.63 0.0 0.0 0.0 31.706962271689747 2.582780152430317 2.582780152430317 2.582780152430317 0 1.1382104921644451 1.5228787452803376 0.0 0.9489700043360187 ST{I|L}H{I|L}V{I|L}{I|L}R;ST{I|L}H{I|L}V{I|L}R{I|L};ST{I|L}{I|L}HV{I|L}{I|L}R;ST{I|L}H{I|L}{I|L}V{I|L}R;ST{I|L}{I|L}HV{I|L}R{I|L};ST{I|L}H{I|L}{I|L}VR{I|L};ST{I|L}{I|L}H{I|L}V{I|L}R;ST{I|L}{I|L}H{I|L}VR{I|L};S{I|L}TH{I|L}V{I|L}{I|L}R;S{I|L}TH{I|L}V{I|L}R{I|L} 8.9862;8.7404;8.367;8.1522;8.1212;7.9063;7.533;7.2872;7.1174;6.8716 -;+;-;-;-;-;-;-;-;- + 821 + 1 1.261 322967.4 1.0 12961 5777 18727 HBL1_DMSO_200M_050219_1,18740 HBL1_DMSO_200M_050219_1,18740,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18741 89.726 307.0 435260.0 25 0 19128.0 -1 0 108 943.9720991859338 1885.929645438668 2 943.9808227419852 MULTI CID FTMS 0 0 0 -1 0 14 3 [{I|L}T]SPN{I|L}VT 8 -1 43.926 0.0 0.0 2.3291 0.0 0.0 0.0 1057.4520813119675 1057.4520813119675 2.1551776969452874 0.0 0.0 0.0 0 0.0 2.0 1.0044321917401078 0.3807196863200844 [{I|L}T]SPN{I|L}VT 2.3291 - 4320 1 1.261 90716.2 1.0 12962 5777 18727 HBL1_DMSO_200M_050219_1,18741 HBL1_DMSO_200M_050219_1,18741, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18742 89.73 233.0 280570.0 25 0 26352.0 + 30109 QVIQDLVVSV 10 113 550.3219413144207 1098.6293296956412 2 550.3214599490166 MULTI CID FTMS 0 0 0 18727 239014.078125 1.0 0 0.0 15 Unmodified _QVIQDLVVSV_ ENSG00000197563|ENST00000640252|PIGN 88.95385435242217 0.009729780394035 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DQ{I|L}V 7 5 61.444 0.0 0.0 5.5928 0.0 0.0 0.0 300.15935996214563 300.15935996214563 36.33351562754905 0.0 0.0 0.0 0 0.3252574989159953 1.154901959985743 1.079689690656103 1.110924374808178 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DQ{I|L}V 5.5928 - 1743 1 1.261 57299.8 1.0 12963 5777 18727 HBL1_DMSO_200M_050219_1,18742 HBL1_DMSO_200M_050219_1,18742,QVIQDLVVSV True True QVIQDLVVSV 89.730112 550.321459949017 1538781.5 18727.0 ENSG00000197563|ENST00000640252|PIGN 4.6430355707804365 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18743 89.744 800.0 310450.0 25 0 9058.7 + + 9043 STIEEFSYI 9 132 1088.5147386109336 1087.5074621443337 1 1088.519946277142 MULTI CID FTMS 0 0 0 18727 218164.40625 0.0222380337157907 10 -1.1212997436523438 16 Unmodified _FEESTLSYL_ ENSG00000153391|ENST00000334598|INO80C;nc|ENSG00000153391|Q6PI98-4|INO80C 92.8221339359638 0.0138398038803217 3 {[QN]|[E{I|L}]|[KN]}TSE{M(Oxidation (M))|F}SY{I|L} 9 -1 + 75.127 0.0 0.0 6.9081 6.9081 81.785 0.0 0.0 0.0 10.412800692342104 7.041199826559236 7.041199826559236 1.9056883587792584 0 0.8818108876706969 1.3010299956639813 2.4916440611282624 0.0 {[QN]|[E{I|L}]|[KN]}TSE{M(Oxidation (M))|F}SY{I|L};{[QN]|[E{I|L}]|[KN]}ETS{M(Oxidation (M))|F}SY{I|L};{[QN]|[E{I|L}]|[KN]}TSE{M(Oxidation (M))|F}S{I|L}Y;{[QN]|[E{I|L}]|[KN]}TES{M(Oxidation (M))|F}SY{I|L};{[QN]|[E{I|L}]|[KN]}ETS{M(Oxidation (M))|F}S{I|L}Y;{[MG]|[TS]}{I|L}EE{M(Oxidation (M))|F}SY{I|L};{[QN]|[E{I|L}]|[KN]}TSES{M(Oxidation (M))|F}Y{I|L};EE{I|L}TS{M(Oxidation (M))|F}SY{I|L};[{I|L}T]SEE{M(Oxidation (M))|F}SY{I|L};{[QN]|[E{I|L}]|[KN]}ETSS{M(Oxidation (M))|F}Y{I|L} 6.9081;6.7329;6.2607;6.1962;6.0855;5.9507;5.9487;5.9022;5.8615;5.7735 -;-;-;-;-;-;-;-;-;- 20026 1 1.261 153124.0 0.9200000166893004 12964 5777 18727 HBL1_DMSO_200M_050219_1,18743 HBL1_DMSO_200M_050219_1,18743,FEESTLSYL False False STIEEFSYI 89.743977 1088.51994627714 87797792.0 18727.0 ENSG00000153391|ENST00000334598|INO80C;;nc|ENSG00000153391|Q6PI98-4|INO80C 2.700159708658854 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18744 89.749 272.0 482680.0 25 0 64494.0 -1 LGVTLVCMS 9 142 490.2501973879564 978.4858418427128 2 490.2506591677666 MULTI CID FTMS 0 0 0 18727 201037.4375 1.0 0 0.0 17 Carbamidomethyl (C) _LGVTLVC(Carbamidomethyl (C))MS_ ENST00000481244.5_1_10:28491134-28569058:-|nuORF 30.22481116460888 0.1466181017706357 3 {[TV]|[{I|L}S]}{I|L}G{I|L}V 6 -1 35.34 0.0 0.0 3.6117 0.0 0.0 0.0 393.0905924077619 393.0905924077619 14.986098727687349 0.0 0.0 0.0 0 0.868415180652539 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}G{I|L}V 3.6117 - 719 + 1 1.261 102113.2 1.0 12965 5777 18727 HBL1_DMSO_200M_050219_1,18744 HBL1_DMSO_200M_050219_1,18744,LGVTLVCMS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18745 89.764 800.0 172970.0 25 0 3547.9 -1 0 134 1193.5502076194125 3577.628793458438 3 1194.550952136517 MULTI CID FTMS 0 0 0 18727 196655.765625 0.8941143248677846 -2 0.1818695068359375 18 3 [YQ]{M(Oxidation (M))|F}{I|L}PPP{M(Oxidation (M))|F}C{M(Oxidation (M))|F}YEV{I|L} 14 -1 65.185 0.0 0.0 1.822 0.0 0.0 0.0 1830.8134409437323 1830.8134409437323 37.61252187420151 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.6382104921644451 [YQ]{M(Oxidation (M))|F}{I|L}PPP{M(Oxidation (M))|F}C{M(Oxidation (M))|F}YEV{I|L} 1.822 - 21350 1 1.261 87129.4 0.800000011920929 12966 5777 18727 HBL1_DMSO_200M_050219_1,18745 HBL1_DMSO_200M_050219_1,18745, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18746 89.778 800.0 277760.0 25 0 24514.0 + -1 PPIPPPLPL 9 163 470.771936573161 939.529320213122 2 470.7721435427666 MULTI CID FTMS 0 0 0 18727 203757.609375 0.435662065013186 4 -0.47564697265625 19 Oxidation (M) _M(Oxidation (M))AALLLRH_ ENSG00000122574|ENST00000242140|WIPF3 49.66892048692302 0.1408045912742846 3 {I|L}{I|L}{I|L}HR 5 -1 54.836 0.0 0.0 5.8366 0.0 0.0 289.10473106426576 0.0 289.10473106426576 0.0 19.01749135888181 0.0 0.0 0 1.1861818737241734 0.0 0.0 0.8026048219588936 {I|L}{I|L}{I|L}HR 5.8366 - 568 + 1 1.261 170320.2 0.8500000238418579 12967 5777 18727 HBL1_DMSO_200M_050219_1,18746 HBL1_DMSO_200M_050219_1,18746,MAALLLRH False False PPIPPPLPL 89.777852 470.772143542767 881233.5625 18727.0 ENSG00000122574|ENST00000242140|WIPF3 -0.2519260744253794 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18747 89.79 723.0 216160.0 25 0 6145.1 -1 0 150 967.4591093913996 1932.9036658495988 2 967.4589111208916 MULTI CID FTMS 0 0 0 18727 205944.5 1.0 0 0.0 20 3 [MN]PN{I|L}DADQ 9 -1 59.932 0.0 0.0 3.1006 0.0 0.0 0.0 931.4628553595488 931.4628553595488 9.454481752096427 0.0 0.0 0.0 0 0.8851518780601924 1.5228787452803376 0.4247425010840047 0.3494850021680094 [MN]PN{I|L}DADQ 3.1006 - 26746 + 1 1.261 109143.9 1.0 12968 5777 18727 HBL1_DMSO_200M_050219_1,18747 HBL1_DMSO_200M_050219_1,18747, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18749 89.795 29.0 6249100.0 25 0 606310.0 + 22379 LPSSLYLKI 9 119 517.3185843076021 1032.6226156820042 2 517.3185912966728 MULTI CID FTMS 0 0 0 18748 2801768.5 0.7079970732692217 1 -0.11053466796875 1 Unmodified _LPSSLYLKI_ ENSG00000111371|ENST00000398637|SLC38A1;ENST00000548979.1_1_12:46591442-46591783:-|nuORF 125.52916310638032 0.0024920486013546 3 {I|L}PSS{I|L}Y{I|L}K{I|L} 9 0 + 121.08 0.0 0.0 11.725 11.725 96.798 0.0 0.0 0.0 36.47817481888637 12.028937514676484 12.028937514676484 12.028937514676484 0 2.4940840204505514 2.0 1.174742501084005 0.5796896906561032 + + {I|L}PSS{I|L}Y{I|L}K{I|L};{I|L}PSS{I|L}Y{I|L}{I|L}K;{I|L}P{[WT]|[RM]}Y{I|L}K{I|L};{I|L}P{I|L}{[CA]|SS}Y{I|L}K{I|L};[{I|L}P]SSY{I|L}{I|L}K{I|L};[{I|L}P]SSY{I|L}K{I|L}{I|L};[VG]D{I|L}Y{I|L}{I|L}K{I|L};{I|L}P{[WT]|[RM]}Y{I|L}{I|L}K;{I|L}P{I|L}{[CA]|SS}Y{I|L}{I|L}K;[VG]D{I|L}Y{I|L}K{I|L}{I|L} 11.725;10.56;9.1859;9.1363;8.6942;8.5015;8.1346;8.021;7.9714;7.9419 +;-;-;-;-;-;-;-;-;- + 1816 + 1 1.294 153223.1 1.0 12969 5778 18748 HBL1_DMSO_200M_050219_1,18749 HBL1_DMSO_200M_050219_1,18749,LPSSLYLKI True True LPSSLYLKI 89.795227 517.318591296673 38048464.0 18748.0 ENSG00000111371|ENST00000398637|SLC38A1;;ENST00000548979.1_1_12:46591442-46591783:-|nuORF 4.978211720784505 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18750 89.796 45.0 4196200.0 25 0 816230.0 + 30639 RFPDFVRDF 9 88 599.8038732626476 1197.593193592095 2 599.8042480349541 MULTI CID FTMS 0 0 0 18748 1779887.125 0.5039659039782137 1 -0.11053466796875 2 Unmodified _RFPDFVRDF_ ENSG00000213339|ENST00000250237|QTRT1;ENST00000587500.5_1_19:10823370-10823943:+|nuORF 88.36371040165146 0.0154903161960565 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DR{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F} 9 2 + 82.718 0.0 0.0 6.907 6.907 89.822 0.0 0.0 0.0 9.152953608616542 13.171591166653217 9.152953608616542 9.152953608616542 0 1.305462187404089 1.6989700043360187 0.0 1.4291746928241125 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DR{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{M(Oxidation (M))|F}RPD{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DR{M(Oxidation (M))|F}V[VG]D{M(Oxidation (M))|F};{M(Oxidation (M))|F}RDP{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{M(Oxidation (M))|F}DRP{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};R{M(Oxidation (M))|F}PD{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}PR{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};R{M(Oxidation (M))|F}DP{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]PD{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[VG]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F} 6.907;6.1427;6.1381;5.9729;5.8849;5.8072;5.6791;5.6373;5.6034;5.5284 -;-;-;-;-;+;-;-;+;- + 1339 1 1.294 139887.1 1.0 12970 5778 18748 HBL1_DMSO_200M_050219_1,18750 HBL1_DMSO_200M_050219_1,18750,RFPDFVRDF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18751 89.798 36.0 8347700.0 25 0 686830.0 + 29722 QPLPVILHV 9 134 508.318790644387 1014.623028355574 2 508.3186218142509 MULTI CID FTMS 0 0 0 18748 2781463.75 0.1471380444218269 -2 0.1883926391601562 3 Unmodified _QPLPVILHV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 46.92087301778293 0.0471210510596396 3 [QP]{I|L}PV{I|L}{I|L}HV 9 0 + 54.107 0.0 0.0 5.3327 5.3327 78.94 0.0 0.0 0.0 3.346853965241067 3.107991487771677 3.107991487771677 3.107991487771677 0 0.8556270500406937 0.5086383061657274 0.0 0.0 + + [QP]{I|L}PV{I|L}{I|L}HV;[QP]{I|L}PV{I|L}{I|L}VH;[VP]{I|L}{I|L}H{I|L}QPV;[QP]{I|L}VP{I|L}{I|L}HV;[VP]{I|L}{I|L}HV{I|L}[QP];[VP]{I|L}{I|L}H{I|L}V[QP];[QP]{I|L}VP{I|L}{I|L}VH;[VP]{I|L}{I|L}{I|L}HQPV;[QP]{I|L}PV{I|L}[HV]{I|L};[{I|L}P]V{I|L}H{I|L}QPV 5.3327;5.0264;5.0029;4.7394;4.6999;4.5263;4.433;3.9765;3.7718;3.6042 +;-;-;-;-;-;-;-;-;- + 924 + 1 1.294 233541.7 1.0 12971 5778 18748 HBL1_DMSO_200M_050219_1,18751 HBL1_DMSO_200M_050219_1,18751,QPLPVILHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18752 89.799 60.0 5995600.0 25 0 490430.0 + 35436 STLHLVLRL 9 134 526.3348604530025 1050.655167972805 2 526.3349487185478 MULTI CID FTMS 0 0 0 18748 1738708.375 0.0607827266929238 -2 0.1883926391601562 4 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 147.05914393524117 0.0331831824667063 3 ST{I|L}H{I|L}V{I|L}R{I|L} 9 0 + 103.15 0.0 0.0 9.8172 9.8172 91.837 0.0 0.0 0.0 17.78659694992122 6.288624837399297 6.288624837399297 6.288624837399297 0 2.6861818737241734 1.6989700043360187 0.0 1.024227503252014 + + ST{I|L}H{I|L}V{I|L}R{I|L};ST{I|L}H{I|L}V{I|L}{I|L}R;ST{I|L}H{I|L}{I|L}VR{I|L};ST{I|L}{I|L}HV{I|L}R{I|L};ST{I|L}H{I|L}{I|L}V{I|L}R;ST{I|L}{I|L}HV{I|L}{I|L}R;ST{I|L}{I|L}H{I|L}VR{I|L};{I|L}TSH{I|L}V{I|L}R{I|L};[H{I|L}]TS{I|L}V{I|L}R{I|L};ST{I|L}{I|L}H{I|L}V{I|L}R 9.8172;9.2187;9.1938;9.0548;8.5953;8.4563;8.4314;8.1243;8.0556;7.8329 +;-;-;-;-;-;-;-;-;- + 983 + 1 1.294 269192.8 1.0 12972 5778 18748 HBL1_DMSO_200M_050219_1,18752 HBL1_DMSO_200M_050219_1,18752,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18753 89.802 134.0 1630100.0 25 0 111840.0 + 19670 LGLFPMDSL 9 142 504.7562471835764 1007.4979414339527 2 504.7561523318291 MULTI CID FTMS 0 0 0 18748 1577609.0 0.9589944961166446 -1 0.10546875 5 Oxidation (M) _LGLFPM(Oxidation (M))DSL_ ENSG00000182606|ENST00000327628|TRAK1;nc|ENSG00000182606|Q9UPV9-2|TRAK1;nc|ENSG00000182606|Q9UPV9-3|TRAK1 46.92087301778293 0.0471210510596396 3 AVRDR 5 8 63.325 0.0 0.0 6.2854 0.0 0.0 0.0 407.1617525690063 407.1617525690063 41.44438589467839 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.6382104921644451 0.805462187404089 AVRDR 6.2854 - 2243 + 1 1.294 167831.7 1.0 12973 5778 18748 HBL1_DMSO_200M_050219_1,18753 HBL1_DMSO_200M_050219_1,18753,LGLFPMDSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18754 89.805 188.0 1413000.0 25 0 149690.0 + 30869 RIMPEDIIINC 11 110 658.8385216493598 1315.6624903655195 2 658.8391601443291 MULTI CID FTMS 0 0 0 18748 721039.25 0.3835410279789519 1 -0.11053466796875 6 Unmodified _RIMPEDIIINC_ ENSG00000198900|ENST00000361337|TOP1 61.08992128646608 0.0647217981198246 3 [R{I|L}]M[EP]D{I|L}{I|L}{I|L}NC 11 0 + 62.664 0.0 0.0 4.763 4.763 79.59 0.0 0.0 0.0 5.305304920019253 8.517805440806399 5.305304920019253 5.305304920019253 0 1.3452266673433142 0.0 0.6549471895720984 1.1861818737241734 + + [R{I|L}]M[EP]D{I|L}{I|L}{I|L}NC;{NN|[MP]|[D{I|L}]|[EV]}[EP]{I|L}{[CA]|SS}{I|L}{I|L}{I|L}NC;{NN|[MP]|[D{I|L}]|[EV]}[TP]{[TV]|[{I|L}S]}D{I|L}{I|L}{I|L}NC;{NN|[MP]|[D{I|L}]|[EV]}[EP]{[WT]|[RM]}{I|L}{I|L}{I|L}NC;{I|L}{I|L}{[CA]|SS}[EP]D{I|L}{I|L}{I|L}NC;[{I|L}T][HC]{[WT]|[RM]}{I|L}{I|L}{I|L}NC;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[EP]{[CA]|SS}{I|L}{I|L}{I|L}NC;[VS][HM]{[WT]|[RM]}{I|L}{I|L}{I|L}NC;{NN|[MP]|[D{I|L}]|[EV]}[EP]{I|L}{[WT]|[RM]}{I|L}{I|L}NC;{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}[EP]D{I|L}{I|L}{I|L}NC 4.763;4.3597;4.2259;4.086;4.0522;3.8333;3.7174;3.542;3.5343;3.5068 +;-;-;-;-;-;-;-;-;- + 324 1 1.294 210675.6 1.0 12974 5778 18748 HBL1_DMSO_200M_050219_1,18754 HBL1_DMSO_200M_050219_1,18754,RIMPEDIIINC True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18755 89.814 478.0 517570.0 25 0 51526.0 -1 NVLMSTNLT 9 182 336.8396360367444 1007.4970787104332 3 336.8392211794853 MULTI CID FTMS 0 0 0 18748 547586.4375 1.0 0 0.0 7 Oxidation (M) _NVLM(Oxidation (M))STNLT_ ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1 22.65808497894818 0.2428932432760099 3 NV{I|L}DQ 5 -1 71.866 0.0 0.0 7.1331 0.0 0.0 0.0 435.1937349908813 435.1937349908813 50.170852925142896 0.0 0.0 0.0 0 0.1643943297944484 1.6989700043360187 1.274227503252014 0.7302046884880937 NV{I|L}DQ 7.1331 - 973 + 1 1.294 196678.3 1.0 12975 5778 18748 HBL1_DMSO_200M_050219_1,18755 HBL1_DMSO_200M_050219_1,18755,NVLMSTNLT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18756 89.817 124.0 844810.0 25 0 129600.0 + -1 GSAQPCHPGL 10 143 512.2390645723777 1022.4635762115556 2 512.2388183474541 MULTI CID FTMS 0 0 0 18748 445896.34375 0.7658189211551268 -1 0.10546875 8 Carbamidomethyl (C) _GSAQPC(Carbamidomethyl (C))HPGL_ REV__ENST00000447416.5_3_22:25003962-25007052:+|nuORF 10.823927491677226 0.6659270209832991 3 {I|L}{I|L}[DC]CDKT{I|L} 9 -1 {I|L}{I|L}[DC]CDKT + + 13.979 2.8725 0.32225 1.3672 1.3672 48.481 0.0 0.0 0.0 0.0 -3.812281309285627 -3.812281309285627 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}[DC]CDKT{I|L} 1.3672 - 248 + 1 1.294 84571.6 1.0 12976 5778 18748 HBL1_DMSO_200M_050219_1,18756 HBL1_DMSO_200M_050219_1,18756,GSAQPCHPGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18757 89.83 800.0 441130.0 25 0 33737.0 + 8901 FAFRYVTTI 9 250 559.305377078076 1116.596201222952 2 559.3064453005791 MULTI CID FTMS 0 0 0 18748 187029.640625 0.0232829626254388 7 -0.8069839477539062 9 Unmodified _FAFRYVTTI_ ENSG00000187325|ENST00000341864|TAF9B;ENSG00000273841|ENST00000217893|TAF9;ENST00000480681.1_1_X:77393446-77395117:-|nuORF;ENST00000587506.1_1_19:30528395-30528668:+|nuORF 89.40071534611396 0.0152361884002446 3 [{I|L}T]QE{[NV]|[RG]}VTT{I|L} 10 5 + 76.08 0.0 0.0 6.8136 6.8136 82.303 0.0 0.0 0.0 13.945608525920363 15.026975159433531 13.945608525920363 2.442864366258746 0 1.1989700043360187 1.5228787452803376 1.424742501084005 0.6989700043360187 [{I|L}T]QE{[NV]|[RG]}VTT{I|L};[{I|L}T]GAE{[NV]|[RG]}VTT{I|L};[{I|L}T]QE[KG]VET{I|L};[{I|L}T]QES[KP]TT{I|L};[{I|L}T]GAE[KG]VET{I|L};[{I|L}T]GAES[KP]TT{I|L};[{I|L}T]QE{I|L}AQTT{I|L};[{I|L}T]GAE{I|L}AQTT{I|L};[{I|L}T]QES[KT]PT{I|L};{I|L}{M(Oxidation (M))|F}T[RK]EPN{I|L} 6.8136;6.5948;6.3264;6.1407;6.1076;5.9219;5.9094;5.6906;5.6255;5.5646 -;-;-;-;-;-;-;-;-;- 33827 1 1.294 260847.9 0.9100000262260436 12977 5778 18748 HBL1_DMSO_200M_050219_1,18757 HBL1_DMSO_200M_050219_1,18757,FAFRYVTTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18758 89.844 800.0 385680.0 25 0 22704.0 + 32331 RYLYMVMEY 9 202 634.2950944773479 1266.5756360214957 2 634.2964355349541 MULTI CID FTMS 0 0 0 18748 167372.734375 1.0 0 0.0 10 Unmodified _RYLYMVMEY_ ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2;ENST00000582445.1_1_18:18625251-18629157:-|nuORF 58.6788170122104 0.0268135626297836 3 {[QN]|[E{I|L}]|[KN]}[RN]VDVMEY 10 6 + 59.152 0.0 0.0 4.6702 4.6702 73.216 0.0 0.0 0.0 1.2371250542002343 12.46970615301926 1.2371250542002343 1.2371250542002343 0 1.424742501084005 0.744727494896694 0.0 0.7614393726401688 {[QN]|[E{I|L}]|[KN]}[RN]VDVMEY;{NN|[MP]|[D{I|L}]|[EV]}N[RP]MVMEY;{[TV]|[{I|L}S]}[HT][C(Carbamidomethyl (C))K]VMEY;{NN|[MP]|[D{I|L}]|[EV]}N[R{I|L}]DVMEY;{[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}VDVMEY;[QP]KG{[QG]|[NA]}MVMEY;[NP]N{I|L}[C(Carbamidomethyl (C))K]VMEY;[{I|L}T][HS][C(Carbamidomethyl (C))K]VMEY;{[QV]|[N{I|L}]|[RA]|[KV]}D[RP]MVMEY;YY[R{I|L}]MVMEY 4.6702;4.5726;4.487;4.3349;4.2957;4.2798;4.2715;4.2135;4.198;4.0419 -;-;-;-;-;-;-;-;-;- 3446 1 1.294 229713.2 0.8500000238418579 12978 5778 18748 HBL1_DMSO_200M_050219_1,18758 HBL1_DMSO_200M_050219_1,18758,RYLYMVMEY True True RYLYMVMEY 89.844191 634.296435534954 1675380.125 18748.0 ENSG00000134318|ENST00000315872|ROCK2;;ENST00000582445.1_1_18:18625251-18629157:-|nuORF;;ENSG00000067900|ENST00000399799|ROCK1 7.924548149108887 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18759 89.858 800.0 361890.0 25 0 39522.0 + 5136 DIIEETGFVL 10 220 568.2984955485404 1134.5824381638806 2 568.2988159060478 MULTI CID FTMS 0 0 0 18748 153269.09375 0.3651971051757262 1 -0.11053466796875 11 Unmodified _DIIEETGFVL_ ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF 37.97399986684836 0.1789611706409123 3 {NN|[MP]|[D{I|L}]|[EV]}N{I|L}[NS]T{M(Oxidation (M))|F}{I|L}V 10 6 + 72.477 0.0 0.0 6.388 6.388 87.309 0.0 0.0 0.0 7.883743026949233 10.1414679944291 7.883743026949233 7.883743026949233 0 0.6747425010840047 0.958607314841775 1.329689690656103 0.5891368308784531 {NN|[MP]|[D{I|L}]|[EV]}N{I|L}[NS]T{M(Oxidation (M))|F}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}D[WQ]T{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}NKADT{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}N[NS]T{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}GG{I|L}[NS]T{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[KA]NDT{M(Oxidation (M))|F}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S{I|L}C{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}EADT{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}GGKADT{M(Oxidation (M))|F}{I|L}V;{I|L}{I|L}DEADT{M(Oxidation (M))|F}{I|L}V 6.388;5.6931;5.6219;5.5972;5.5802;5.0114;4.9315;4.8311;4.8141;4.8117 -;-;-;-;-;-;-;-;-;- 5427 1 1.294 215851.8 0.8399999737739563 12979 5778 18748 HBL1_DMSO_200M_050219_1,18759 HBL1_DMSO_200M_050219_1,18759,DIIEETGFVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18760 89.872 800.0 269170.0 25 0 18358.0 -1 0 121 628.9214384110145 3139.570809722072 5 629.1221191287041 MULTI CID FTMS 0 0 0 18748 156812.421875 0.1771935820720967 6 -0.6999588012695312 12 3 ANP{M(Oxidation (M))|F}D[DV]{I|L}SA{I|L}SD 13 -1 77.142 0.0 0.0 2.4571 0.0 0.0 1190.6323815573276 601.3221995804769 1791.9545811378043 0.0 0.0 0.0 0.0 0 1.1677353201839438 0.0 1.579689690656103 0.3807196863200844 ANP{M(Oxidation (M))|F}D[DV]{I|L}SA{I|L}SD 2.4571 - 16260 + 1 1.294 164218.3 0.8299999833106995 12980 5778 18748 HBL1_DMSO_200M_050219_1,18760 HBL1_DMSO_200M_050219_1,18760, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18761 89.876 122.0 1425900.0 25 0 118370.0 -1 0 97 983.0392835658208 0 982.5597411990166 PEAK CID FTMS 0 0 0 18748 35436.45703125 0.0786798209461006 -1 0.10546875 13 3 AVHNV{I|L}D 7 -1 42.185 0.0 0.0 2.1478 0.0 0.0 988.5717629547836 224.10433374576408 1212.6760967005478 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5484550065040282 1.0114393726401687 AVHNV{I|L}D 2.1478 - 9249 + 1 1.294 118732.1 1.0 12981 5778 18748 HBL1_DMSO_200M_050219_1,18761 HBL1_DMSO_200M_050219_1,18761, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18762 89.885 516.0 193770.0 25 0 15029.0 + 39609 VDLTQQYK 8 143 332.1769714376922 993.5090849132766 3 332.1764709353447 MULTI CID FTMS 0 0 0 18748 131668.625 0.4657139935946856 -2 0.1883926391601562 14 Unmodified _VDLTQQYK_ REV__ENSG00000136367|ENST00000419474|ZFHX2;REV__nc|ENSG00000136367|Q9C0A1-2|ZFHX2 6.723162845929126 0.7835230281555235 3 A 1 -1 14.604 0.0 0.0 1.47 0.0 0.0 904.4606973173768 0.0 904.4606973173768 0.0 -9.256368635175608 -9.256368635175608 0.0 0 0.0 0.0 0.0 0.0 A 1.47 - 300 + 1 1.294 80931.2 1.0 12982 5778 18748 HBL1_DMSO_200M_050219_1,18762 HBL1_DMSO_200M_050219_1,18762,VDLTQQYK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18763 89.89 301.0 517010.0 25 0 47493.0 -1 0 105 608.9637622088569 1823.8694572267705 3 608.9640380740166 MULTI CID FTMS 0 0 0 18748 125018.4296875 0.1950648719378232 -2 0.1883926391601562 15 3 [H{I|L}]QEGCMS{I|L}Y 10 -1 62.561 0.0 0.0 3.4301 0.0 0.0 0.0 659.3479721691587 659.3479721691587 31.92593794827836 0.0 0.0 0.0 0 1.424742501084005 1.5228787452803376 0.0 0.0 [H{I|L}]QEGCMS{I|L}Y 3.4301 - 1446 1 1.294 120490.3 1.0 12983 5778 18748 HBL1_DMSO_200M_050219_1,18763 HBL1_DMSO_200M_050219_1,18763, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18764 89.893 140.0 1669600.0 25 0 373550.0 -1 0 94 989.531828592994 1977.049104252788 2 989.5330078005792 MULTI CID FTMS 0 0 0 18748 132786.90625 0.213160197838751 -1 0.10546875 16 3 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN{I|L}V 8 -1 61.859 0.0 0.0 3.1289 0.0 0.0 0.0 1093.5238902331312 1093.5238902331312 18.9185043833222 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5044321917401079 1.960409376976188 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN{I|L}V 3.1289 - 10433 1 1.294 154912.0 1.0 12984 5778 18748 HBL1_DMSO_200M_050219_1,18764 HBL1_DMSO_200M_050219_1,18764, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18765 89.896 150.0 488270.0 25 0 57415.0 40236 VGSISPRDFI 10 109 545.796794412356 1089.579035891512 2 546.2958862185478 MULTI CID FTMS 0 0 0 18748 128460.0625 0.451984777275514 -3 0.2873382568359375 17 Unmodified _VGSISPRDFI_ ENSG00000174448|ENST00000307844|STARD6 13.90604991867851 0.6142120002215601 3 [QA][{I|L}P]GPSPVPQ 11 9 + 40.75 0.0 0.0 3.74 3.74 69.866 0.0 0.0 0.0 7.028715947163455 26.77040761934979 7.028715947163455 0.7968969065610239 0 0.0 0.0 0.3807196863200844 0.2742275032520141 [QA][{I|L}P]GPSPVPQ;[QA][{I|L}P]GPSPPVQ;[{M(Oxidation (M))|F}V][Y{I|L}]QPPVQ;[{M(Oxidation (M))|F}V][Y{I|L}]QPVPQ;[QA][{I|L}P]GPS[RH]Q;[KG][WR]RYPQ;[{M(Oxidation (M))|F}V][Y{I|L}][AG]PPVQ;{[VA]|[{I|L}G]}[RH]{[{M(Oxidation (M))|F}H]|[RQ]}PVQ;[KG][WR][YG]PVQ;[{M(Oxidation (M))|F}V][Y{I|L}][AG]PVPQ 3.74;3.6668;2.1394;1.8632;1.6187;1.3688;1.2943;1.2702;1.0713;1.018 -;-;-;-;-;-;-;-;-;- 274 1 1.294 64096.9 1.0 12985 5778 18748 HBL1_DMSO_200M_050219_1,18765 HBL1_DMSO_200M_050219_1,18765,VGSISPRDFI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18766 89.901 260.0 802360.0 25 0 144100.0 + 19675 LGLLNFYL 8 144 476.7776029840253 0 476.7779418826103 PEAK CID FTMS 0 0 0 18748 93010.3671875 0.3122936112016969 -2 0.1883926391601562 18 Unmodified _LGLLNFYL_ REV__ENSG00000148942|ENST00000396005|SLC5A12;REV__nc|ENSG00000148942|Q1EHB4-2|SLC5A12 42.96799951952854 0.1251824406268783 3 {I|L}{I|L}NVEG 6 -1 42.291 0.0 0.0 4.4445 0.0 0.0 170.10255596629435 153.0670565240844 323.1696124903788 0.0 0.0 0.0 0.0 0 0.4674165578762485 0.0 0.2887254899964357 1.3494850021680094 {I|L}{I|L}NVEG 4.4445 - 1691 + 1 1.294 159234.2 1.0 12986 5778 18748 HBL1_DMSO_200M_050219_1,18766 HBL1_DMSO_200M_050219_1,18766,LGLLNFYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18768 89.906 1.4 90927000.0 25 0 16372000.0 + 26518 NVIDNLIVA 9 100 485.78227411203727 969.5499952908746 2 485.7831603884697 MULTI CID FTMS 0 0 0 18767 87996192.0 0.7298547877792337 -1 0.11053466796875 1 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 39.94969957227396 0.0757326808254658 3 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN{I|L}VA 9 4 + 57.889 0.0 0.0 5.9707 5.9707 78.036 0.0 0.0 0.0 7.95880017344075 8.072420927871988 7.95880017344075 1.4215905896025305 0 0.7429928190999391 0.9208187539523752 0.5866968715561641 0.7302046884880937 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}DVN{I|L}{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}NV{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}VEVN{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}VDN{I|L}{I|L}VA;{[NV]|[RG]}E{I|L}VN{I|L}VA;[{I|L}V]NEVN{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DVN{I|L}VA;{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VGG{I|L}VA;{[NV]|[RG]}EVN{I|L}{I|L}VA 5.9707;5.8241;5.5912;5.3248;5.1782;5.1499;5.1432;5.1432;5.021;5.0032 -;-;-;-;-;-;-;-;-;- 1621 1 1.294 103106.6 1.0 12987 5779 18767 HBL1_DMSO_200M_050219_1,18768 HBL1_DMSO_200M_050219_1,18768,NVIDNLIVA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18769 89.908 91.0 2101900.0 25 0 153870.0 + 29869 QQVQRLPFL 9 138 564.8299374651045 1127.645321997009 2 564.8301269412041 MULTI CID FTMS 0 0 0 18767 1498805.375 0.3066308635296036 2 -0.2596435546875 2 Unmodified _QQVQRLPFL_ ENSG00000132963|ENST00000380842|POMP 133.70201269244603 0.0112873236905593 3 QQVQR{I|L}P{M(Oxidation (M))|F}{I|L} 9 0 + 75.699 0.0 0.0 6.713 6.713 90.012 0.0 0.0 0.0 40.67675468141714 14.973024840566474 14.973024840566474 9.208187539523747 0 2.115356566548286 0.6989700043360187 0.0 0.5774509799928715 + + QQVQR{I|L}P{M(Oxidation (M))|F}{I|L};QQV[AG]R{I|L}P{M(Oxidation (M))|F}{I|L};[AG][AG]VQR{I|L}P{M(Oxidation (M))|F}{I|L};[AG][AG]V[AG]R{I|L}P{M(Oxidation (M))|F}{I|L};[AG]R[{I|L}V]QQP{M(Oxidation (M))|F}{I|L};[HT]VQR{I|L}[YV]{I|L};[AG]V[R{I|L}]QQP{M(Oxidation (M))|F}{I|L};[AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HV]{I|L}P{M(Oxidation (M))|F}{I|L};[AG][HK][{M(Oxidation (M))|F}V]{I|L}P{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}HQR{I|L}[YV]{I|L} 6.713;5.8964;5.8144;5.0048;3.3378;3.0127;2.9691;2.9481;2.8373;2.7793 +;-;-;-;-;-;-;-;-;- + 1418 + 1 1.294 146639.5 1.0 12988 5779 18767 HBL1_DMSO_200M_050219_1,18769 HBL1_DMSO_200M_050219_1,18769,QQVQRLPFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18770 89.91 83.0 2340500.0 25 0 237900.0 + 16873 KIFEDIPTL 9 162 538.3049197819405 1074.595286630681 2 538.3056518435478 MULTI CID FTMS 0 0 0 18767 1788395.25 0.2199667257009859 -2 0.21600341796875 3 Unmodified _KIFEDIPTL_ ENSG00000163565|ENST00000295809|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16 92.65332237495696 0.0139087009896299 3 MVV{I|L}R{M(Oxidation (M))|F}PT{I|L} 9 6 + 80.704 0.0 0.0 7.5102 7.5102 80.285 0.0 0.0 0.0 24.664478833090364 14.973024840566469 14.973024840566469 0.1536311977179849 0 0.7614393726401688 0.0 1.4731975075880328 0.3054621874040891 MVV{I|L}R{M(Oxidation (M))|F}PT{I|L};MVV{I|L}DERT{I|L};{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}K{I|L}PT{I|L};{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}R{I|L}PT{I|L};MVV{I|L}[VG]{M(Oxidation (M))|F}PT{I|L};[K{I|L}]{M(Oxidation (M))|F}ED{I|L}PT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L}K{I|L}PT{I|L};MVVR{I|L}{M(Oxidation (M))|F}PT{I|L};MVVEVERT{I|L};MVVED{I|L}RT{I|L} 7.5102;7.4959;6.5913;6.4807;6.369;6.1089;6.0113;5.9903;5.8473;5.7309 -;-;-;-;-;+;-;-;-;- + 5314 + 1 1.294 160450.6 1.0 12989 5779 18767 HBL1_DMSO_200M_050219_1,18770 HBL1_DMSO_200M_050219_1,18770,KIFEDIPTL True True KIFEDIPTL 89.909576 538.305651843548 75391048.0 18767.0 ENST00000493884.5_1_1:158984458-159022017:+|nuORF;;nc|ENSG00000163565|Q16666-2|IFI16;;nc|ENSG00000163565|Q16666-6|IFI16;;nc|ENSG00000163565|Q16666-3|IFI16;;ENSG00000163565|ENST00000295809|IFI16 4.362339735031128 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18771 89.911 24.0 3121500.0 25 0 348230.0 + 26825 PAPSPCPRGL 10 106 497.7607494254192 993.5069459176384 2 497.7608520388603 MULTI CID FTMS 0 0 0 18767 1480145.75 1.0 0 0.0 4 Unmodified _PAPSPCPRGL_ REV__ENST00000592634.5_1_19:5895457-5895973:-|nuORF 15.847184025352805 0.5816416552707754 3 {M(Oxidation (M))|F}{I|L} 2 -1 16.198 0.0 0.0 1.6304 0.0 0.0 715.3431408412697 0.0 715.3431408412697 0.0 0.1365326363922214 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L} 1.6304 - 599 + 1 1.294 64029.8 1.0 12990 5779 18767 HBL1_DMSO_200M_050219_1,18771 HBL1_DMSO_200M_050219_1,18771,PAPSPCPRGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18772 89.913 80.0 2498100.0 25 0 359830.0 + 36343 SYPDNFLHI 9 126 553.2694585235851 1104.52436411397 2 553.2698242068291 MULTI CID FTMS 0 0 0 18767 1247089.25 0.2718953576481666 -1 0.11053466796875 5 Unmodified _SYPDNFLHI_ ENSG00000057663|ENST00000369076|ATG5;nc|ENSG00000057663|Q9H1Y0-2|ATG5 39.957323273325 0.0756908302845263 3 [DP]N{M(Oxidation (M))|F}{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 9 4 + 52.387 0.0 0.0 4.743 4.743 85.636 0.0 0.0 0.0 14.672295748230752 4.137342758552691 4.137342758552691 14.672295748230752 0 0.0 1.0969100130080565 0.555462187404089 1.0 [DP]N{M(Oxidation (M))|F}{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[{M(Oxidation (M))|F}C]|[YS]}PDN{M(Oxidation (M))|F}{I|L}H{I|L};{[{M(Oxidation (M))|F}C]|[YS]}PDN{M(Oxidation (M))|F}{I|L}{I|L}H;[DN]P{M(Oxidation (M))|F}{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[DP]GG{M(Oxidation (M))|F}{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{NN|[MP]|[D{I|L}]|[EV]}[MN]{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HM]{I|L}H{I|L}[HN]{[CT]|[{M(Oxidation (M))|F}G]};{[QN]|[E{I|L}]|[KN]}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DP{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[TV]|[{I|L}S]}{I|L}[MN][QA]P[MT] 4.743;3.4146;3.2077;3.1673;3.0039;2.9737;2.9576;2.9422;2.8142;2.6389 -;+;-;-;-;-;-;-;-;- + 1268 1 1.294 157920.6 1.0 12991 5779 18767 HBL1_DMSO_200M_050219_1,18772 HBL1_DMSO_200M_050219_1,18772,SYPDNFLHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18773 89.915 111.0 1560400.0 25 0 214030.0 + 9185 FGGVLILIHR 10 114 375.5692990116058 1123.6860676350177 3 375.5692932009697 MULTI CID FTMS 0 0 0 18767 980593.875 0.0273988008102003 9 -1.0223464965820312 6 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 64.23631603340823 0.0254735623525308 3 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 107.08 0.0 0.0 9.5293 9.5293 91.586 0.0 0.0 0.0 79.187522094009 29.21179852113275 29.21179852113275 6.1928031367991565 0 1.048455006504028 2.0 0.0 2.198104871308642 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}QV{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}[AG]V{I|L}{I|L}HR 9.5293;8.9782;8.7099;8.1588 -;-;-;- 368 + 1 1.294 144346.3 1.0 12992 5779 18767 HBL1_DMSO_200M_050219_1,18773 HBL1_DMSO_200M_050219_1,18773,FGGVLILIHR True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18774 89.922 375.0 569350.0 25 0 50774.0 23980 LVTRYLRI 8 162 345.2222822525596 1032.6450173578787 3 345.2219116091728 MULTI CID FTMS 0 0 0 18767 698356.8125 0.8337606959419257 -1 0.11053466796875 7 Unmodified _LVTRYLRI_ ENST00000494087.5_1_13:45780977-45781184:+|nuORF 15.847184025352805 0.6768015514314958 3 {I|L}[{M(Oxidation (M))|F}T]{I|L}V{I|L}{I|L}R 8 5 48.18 0.0 0.0 4.6657 0.0 0.0 59.03377690762631 0.0 59.03377690762631 0.0 30.43350257770477 0.0 0.0 0 0.3494850021680094 0.0 0.8494850021680094 0.5044321917401079 {I|L}[{M(Oxidation (M))|F}T]{I|L}V{I|L}{I|L}R 4.6657 - 449 + 1 1.294 174478.4 1.0 12993 5779 18767 HBL1_DMSO_200M_050219_1,18774 HBL1_DMSO_200M_050219_1,18774,LVTRYLRI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18775 89.924 103.0 294180.0 25 0 18687.0 + 45075 YPYHYAPFL 9 54 585.7852433698017 1169.5559338064031 2 585.7861816287041 MULTI CID FTMS 0 0 0 18767 683082.0 0.4336874027266806 2 -0.2596435546875 8 Unmodified _YPYHYAPFL_ ENSG00000114127|ENST00000392981|XRN1;ENST00000472697.5_1_3:142095319-142144369:-|nuORF;nc|ENSG00000114127|Q8IZH2|XRN1 28.17323086031832 0.1727213568982648 3 {[WN]|[YH]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AYP{M(Oxidation (M))|F}{I|L} 9 3 {[WN]|[YH]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AY + + 26.427 12.676 1.5958 2.2595 2.2595 49.083 0.0 0.0 0.0 0.0 13.750612633917 0.0 0.0 0 0.5 0.0 0.0 0.0 {[WN]|[YH]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AYP{M(Oxidation (M))|F}{I|L} 2.2595 - 31 + 1 1.294 30707.4 1.0 12994 5779 18767 HBL1_DMSO_200M_050219_1,18775 HBL1_DMSO_200M_050219_1,18775,YPYHYAPFL False True YPYHYAPFL 89.92387 585.786181628704 28179630.0 18767.0 nc|ENSG00000114127|Q8IZH2|XRN1;;ENSG00000114127|ENST00000392981|XRN1;;ENST00000472697.5_1_3:142095319-142144369:-|nuORF 8.294378439585367 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18776 89.932 469.0 1025800.0 25 0 138010.0 -1 0 122 1011.1094599705854 2020.2043670079704 2 1011.611010730267 MULTI CID FTMS 0 0 0 18767 625879.4375 1.0 0 0.0 9 3 [EP]G{I|L}{I|L}NVATV 10 -1 61.166 0.0 0.0 3.0277 0.0 0.0 0.0 1023.6356163578332 1023.6356163578332 16.191806025692195 0.0 0.0 0.0 0 0.0 0.0 1.680265894174725 1.292674056792244 [EP]G{I|L}{I|L}NVATV 3.0277 - 26774 1 1.294 305234.8 1.0 12995 5779 18767 HBL1_DMSO_200M_050219_1,18776 HBL1_DMSO_200M_050219_1,18776, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18777 89.937 248.0 1845000.0 25 0 176520.0 + 18145 KTPDFILQV 9 205 530.8060859879108 1059.5976190426215 2 530.8075439333916 MULTI CID FTMS 0 0 0 18767 573573.0 0.4326938772084688 -1 0.11053466796875 10 Unmodified _KTPDFILQV_ ENSG00000186073|ENST00000566621|CDIN1;ENST00000566677.1_1_15:37001404-37100651:+|nuORF;ENST00000570265.5_1_15:36871929-37039277:+|nuORF;nc|ENSG00000186073|Q9Y2V0-2|CDIN1 51.629811660486645 0.0367964933207742 3 {NN|[MP]|[D{I|L}]|[EV]}MTK{I|L}{M(Oxidation (M))|F} 7 7 39.85 0.0 0.0 3.7608 0.0 0.0 0.0 208.1509997401403 208.1509997401403 18.41272493393312 0.0 0.0 0.0 0 0.6237125054200234 0.5228787452803376 0.8585380453316205 0.0 {NN|[MP]|[D{I|L}]|[EV]}MTK{I|L}{M(Oxidation (M))|F} 3.7608 - 4062 1 1.294 354905.5 1.0 12996 5779 18767 HBL1_DMSO_200M_050219_1,18777 HBL1_DMSO_200M_050219_1,18777,KTPDFILQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18778 89.948 652.0 592130.0 25 0 89358.0 + 30642 RFPDFVRDF 9 184 400.2051320102505 1197.5935666309515 3 400.2049743533134 MULTI CID FTMS 0 0 0 18767 320184.1875 0.3123738456666994 2 -0.2596435546875 11 Unmodified _RFPDFVRDF_ ENSG00000213339|ENST00000250237|QTRT1;ENST00000587500.5_1_19:10823370-10823943:+|nuORF 57.72198328787511 0.0273433238377839 3 [R{M(Oxidation (M))|F}]PD{M(Oxidation (M))|F}V{M(Oxidation (M))|F}DR 9 2 [R{M(Oxidation (M))|F}]P + + 40.811 7.5023 1.8745 3.4077 3.4077 51.059 0.0 0.0 0.0 0.0 27.71185615499676 0.0 0.0 0 0.9247425010840048 0.0 0.6643943297944485 0.5356668758921829 [R{M(Oxidation (M))|F}]PD{M(Oxidation (M))|F}V{M(Oxidation (M))|F}DR 3.4077 - 331 + 1 1.294 295166.2 1.0 12997 5779 18767 HBL1_DMSO_200M_050219_1,18778 HBL1_DMSO_200M_050219_1,18778,RFPDFVRDF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18779 89.96 683.0 390490.0 25 0 45918.0 27885 PLSLPELT 8 188 435.2525437444794 868.4905345557588 2 435.2526122927666 MULTI CID FTMS 0 0 0 18767 300507.6875 0.7678936973558893 2 -0.2596435546875 12 Unmodified _PLSLPELT_ ENSG00000082516|ENST00000285873|GEMIN5;REV__ENSG00000114473|ENST00000265239|IQCG;REV__ENST00000463651.1_1_3:197670645-197672498:-|nuORF;REV__ENST00000480302.5_1_3:197665562-197672498:-|nuORF 67.03532852164291 0.116292309877964 3 [{I|L}P]S{I|L}PET{I|L} 8 2 + 34.611 0.0 0.0 3.9852 3.9852 69.181 0.0 0.0 0.0 0.0380486433302138 0.0380486433302138 0.0380486433302138 0.0380486433302138 0 0.7429928190999391 1.3979400086720375 1.2803695511246982 0.0 [{I|L}P]S{I|L}PET{I|L};[H{I|L}]{I|L}C(Carbamidomethyl (C)){I|L}T{I|L};[{I|L}P]S{I|L}TP{[QN]|[E{I|L}]|[KN]};[{I|L}P]S{I|L}T{I|L}EP;[{I|L}P]S[EP]{I|L}T{I|L};[{I|L}P]S{I|L}PT{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}P{I|L}PET{I|L};[TP]V{I|L}PET{I|L};[{I|L}T]S{I|L}PP{[QN]|[E{I|L}]|[KN]};[{I|L}T]S{I|L}P{I|L}EP 3.9852;3.9808;3.368;3.2733;3.2178;3.0279;2.789;2.6547;2.5535;2.4588 -;-;-;-;-;-;-;-;-;- 606 1 1.294 204982.5 1.0 12998 5779 18767 HBL1_DMSO_200M_050219_1,18779 HBL1_DMSO_200M_050219_1,18779,PLSLPELT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18780 89.974 800.0 334080.0 25 0 18130.0 -1 0 125 997.5169555544852 0 997.5169555544852 PEAK CID FTMS 0 0 0 -1 0 13 3 V{I|L}NV{I|L}D 6 -1 24.162 0.0 0.0 1.2123 0.0 0.0 1112.5126262551537 224.1048830621704 1336.6175093173238 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.2302046884880935 V{I|L}NV{I|L}D 1.2123 - 3109 + 1 1.294 170438.2 0.9399999976158142 12999 5779 18767 HBL1_DMSO_200M_050219_1,18780 HBL1_DMSO_200M_050219_1,18780, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18781 89.987 770.0 550630.0 25 0 54057.0 + 33184 SFFDATDRVSF 11 212 646.3020258163207 1290.5894986994413 2 646.3029662966728 MULTI CID FTMS 0 0 0 18767 214221.828125 0.419851705975981 -1 0.11053466796875 14 Unmodified _SFFDATDRVSF_ nc|ENSG00000005889|P17010-3|ZFX 68.4839486629058 0.0367980720036246 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]{I|L}[HA]ADES{M(Oxidation (M))|F} 12 7 + 95.606 0.0 0.0 7.4079 7.4079 83.899 0.0 0.0 0.0 8.946719818784658 16.611814434466197 8.946719818784658 2.4344612326267594 0 2.118415180652539 2.0 2.059894379144197 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]{I|L}[HA]ADES{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[Q{I|L}]TADES{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]{M(Oxidation (M))|F}ADES{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]{I|L}[HA]ADTD{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[Q{I|L}]TADTD{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]{M(Oxidation (M))|F}ADTD{M(Oxidation (M))|F};[{I|L}T]HRDTADES{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[WR]ADES{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]{I|L}[HA]WES{M(Oxidation (M))|F};[{I|L}T]HRDTADTD{M(Oxidation (M))|F} 7.4079;7.2193;7.149;7.0007;6.812;6.7418;6.7147;6.7097;6.3145;6.3074 -;-;-;-;-;-;-;-;-;- 13682 1 1.294 307416.5 1.0 13000 5779 18767 HBL1_DMSO_200M_050219_1,18781 HBL1_DMSO_200M_050219_1,18781,SFFDATDRVSF True True SFFDATDRVSF 89.987261 646.302966296673 3474727.75 18767.0 nc|ENSG00000005889|P17010-3|ZFX 6.849523385365804 2.0 True 11.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 18782 89.992 170.0 1484900.0 25 0 127170.0 -1 0 143 432.2949319238811 862.5753109145622 2 432.2945434451103 MULTI CID FTMS 0 0 0 18767 200764.265625 0.5393376189046231 -1 0.11053466796875 15 3 {I|L}H{I|L}V{I|L}R{I|L} 7 -1 + 71.868 0.0 0.0 8.3317 8.3317 91.708 0.0 0.0 0.0 61.48891258380463 12.825222123572216 12.825222123572216 7.605742396127937 0 1.25 1.6989700043360187 0.0 0.9436726795685342 {I|L}H{I|L}V{I|L}R{I|L};{I|L}H{I|L}{I|L}VR{I|L};{I|L}H{I|L}{I|L}[R{I|L}]V;{I|L}{I|L}HV{I|L}R{I|L};{I|L}{I|L}H{I|L}VR{I|L};{I|L}{I|L}H{I|L}[R{I|L}]V 8.3317;7.45;6.1812;5.0283;4.1465;2.8778 -;-;-;-;-;- 163 + 1 1.294 194159.7 1.0 13001 5779 18767 HBL1_DMSO_200M_050219_1,18782 HBL1_DMSO_200M_050219_1,18782, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18783 89.999 407.0 471680.0 25 0 56029.0 + + 11479 SILEKFIRV 9 158 368.229380821354 1101.666313064262 3 368.8977538943291 MULTI CID FTMS 0 0 0 18767 198027.0 0.7389490233174497 -1 0.11053466796875 16 Unmodified _GIIERLFRV_ ENSG00000184445|ENST00000333479|KNTC1 17.11289562659939 0.3734572693229295 3 [TP]{I|L}EKV 6 -1 44.509 0.0 0.0 4.0401 0.0 0.0 0.0 431.2427883341816 431.2427883341816 23.833591317498097 0.0 0.0 0.0 0 0.0 0.585026652029182 0.4247425010840047 0.75 [TP]{I|L}EKV 4.0401 - 898 + 1 1.294 153835.2 1.0 13002 5779 18767 HBL1_DMSO_200M_050219_1,18783 HBL1_DMSO_200M_050219_1,18783,GIIERLFRV False False SILEKFIRV 89.9993 368.897753894329 2683626.5 18767.0 ENSG00000184445|ENST00000333479|KNTC1 2.393802722295125 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18784 90.002 135.0 647490.0 25 0 61099.0 + + 14642 AQYLINVRL 9 114 544.8211903903407 1087.6278278474813 2 545.3287841677666 MULTI CID FTMS 0 0 0 18767 161253.421875 0.3864403577163537 -6 0.573638916015625 17 Unmodified _IIKKMLEDV_ nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2 15.847184025352805 0.4077185912009129 3 [TP]Y{I|L}{I|L}[RN]V{I|L} 9 -1 + 27.113 0.0 0.0 2.4929 2.4929 68.878 0.0 0.0 0.0 1.434305197348852 2.04119982655925 1.434305197348852 1.76091259055681 0 0.0 0.0 0.0 0.0 [TP]Y{I|L}{I|L}[RN]V{I|L};[TP]Y{I|L}{I|L}{[NV]|[RG]}R{I|L};[TP]Y{I|L}{I|L}[RN]{I|L}V;[TP]Y{I|L}{I|L}{I|L}[RN]V;SHH{I|L}{I|L}[RN]V{I|L};SHH{I|L}{I|L}{[NV]|[RG]}R{I|L};SHH{I|L}{I|L}[RN]{I|L}V;SHH{I|L}{I|L}{I|L}[RN]V;[TP]{I|L}Y{I|L}[RN]V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KK{I|L}Y[RH] 2.4929;2.331;2.3052;2.3052;2.2161;2.0542;2.0284;2.0284;1.9393;1.869 -;-;-;-;-;-;-;-;-;- 418 + 1 1.294 75072.0 1.0 13003 5779 18767 HBL1_DMSO_200M_050219_1,18784 HBL1_DMSO_200M_050219_1,18784,IIKKMLEDV False False AQYLINVRL 90.002048 545.328784167767 3570917.5 18767.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;;nc|ENSG00000197111|Q15366-7|PCBP2 4.495606740315755 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18785 90.016 800.0 700620.0 25 0 82762.0 + 37523 TLHLVLRL 8 203 482.8195218178524 0 482.8208801150322 PEAK CID FTMS 0 0 0 18767 163249.484375 0.6246877522966525 -1 0.11053466796875 18 Unmodified _TLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 115.6920309560759 1.5602867432726783e-06 3 TH{I|L}V{I|L}R 6 2 61.948 0.0 0.0 6.4287 0.0 0.0 113.083395939641 128.07233606510002 241.15573200474105 0.0 0.0 0.0 0.0 0 2.4049471895720984 0.0 0.3807196863200844 1.1976212463643423 TH{I|L}V{I|L}R 6.4287 - 459 + 1 1.294 419487.8 0.699999988079071 13004 5779 18767 HBL1_DMSO_200M_050219_1,18785 HBL1_DMSO_200M_050219_1,18785,TLHLVLRL True True TLHLVLRL 90.015865 482.820880115032 1691008.75 18767.0 ENSG00000143947|ENST00000272317|RPS27A;;chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC 4.26011308034261 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18786 90.031 800.0 165030.0 25 0 5325.3 + -1 GVDIILGV 8 113 786.1511108279228 0 786.1511108279228 PEAK CID FTMS 0 0 0 -1 0 19 nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-2|EPB41;ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 3 {I|L}SA{I|L}HNGE 8 -1 36.552 0.0 0.0 2.3278 0.0 0.0 379.6428763121936 366.22382532291255 745.8667016351061 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3494850021680094 {I|L}SA{I|L}HNGE 2.3278 - 1248 + 1 1.294 95694.2 0.7099999785423279 13005 5779 18767 HBL1_DMSO_200M_050219_1,18786 HBL1_DMSO_200M_050219_1,18786, False False GVDIILGV 90.030871 786.151110827923 309774.375 18767.0 nc|ENSG00000159023|P11171-5|EPB41;;nc|ENSG00000159023|P11171-2|EPB41;;ENSG00000159023|ENST00000343067|EPB41;;nc|ENSG00000159023|P11171-3|EPB41;;nc|ENSG00000159023|P11171-4|EPB41;;nc|ENSG00000159023|P11171-6|EPB41;;nc|ENSG00000159023|P11171-7|EPB41 0.4044609144330024 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18787 90.041 594.0 374250.0 25 0 55139.0 -1 0 148 923.4571821270748 1844.8998113209493 2 923.9611694216728 MULTI CID FTMS 0 0 0 18767 143207.0 0.8514062686515864 -2 0.21600341796875 20 3 [NP]{I|L}QVG{I|L}AM[YG]P 12 -1 51.428 0.0 0.0 2.7876 0.0 0.0 0.0 601.319970001745 601.319970001745 25.73116642230864 0.0 0.0 0.0 0 0.4247425010840047 0.5228787452803376 0.0 1.5911290632962718 [NP]{I|L}QVG{I|L}AM[YG]P 2.7876 - 29294 1 1.294 145048.9 1.0 13006 5779 18767 HBL1_DMSO_200M_050219_1,18787 HBL1_DMSO_200M_050219_1,18787, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18789 90.045 1.3 44894000.0 25 0 3513200.0 + 35428 STLHLVLRL 9 70 351.2258024463099 1050.6555779391297 3 351.2261840701103 MULTI CID FTMS 0 0 0 18788 40263184.0 1.0 0 0.0 1 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 24.020572477871973 0.2255576514309169 3 [H{I|L}]TS 4 7 35.662 0.0 0.0 3.3942 0.0 0.0 0.0 609.4093675721953 609.4093675721953 7.245462655597095 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3494850021680094 0.0 [H{I|L}]TS 3.3942 - 94 1 1.294 49739.5 1.0 13007 5780 18788 HBL1_DMSO_200M_050219_1,18789 HBL1_DMSO_200M_050219_1,18789,STLHLVLRL False True STLHLVLRL 90.045425 351.22618407011 2679845136.0 18788.0 ENSG00000143947|ENST00000272317|RPS27A;;chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC 5.2965019543965655 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18790 90.047 23.0 7840500.0 25 0 2072400.0 + 30209 QVVVDPKP 8 96 441.2579069695686 880.5012610059372 2 441.2582580447197 MULTI CID FTMS 0 0 0 18788 2797355.75 1.0 0 0.0 2 Unmodified _QVVVDPKP_ REV__ENSG00000067177|ENST00000373542|PHKA1;REV__nc|ENSG00000067177|P46020-2|PHKA1;REV__nc|ENSG00000067177|P46020-3|PHKA1 42.09456458481378 0.1992492688217789 3 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN 6 -1 54.146 0.0 0.0 6.1494 0.0 0.0 0.0 209.12717657987187 209.12717657987187 27.54174635119044 0.0 0.0 0.0 0 0.6549471895720985 1.0969100130080565 0.8149093276264391 0.9604093769761876 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN 6.1494 - 1603 1 1.294 142758.1 1.0 13008 5780 18788 HBL1_DMSO_200M_050219_1,18790 HBL1_DMSO_200M_050219_1,18790,QVVVDPKP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18791 90.048 22.0 3300600.0 25 0 290070.0 + 12756 GVPELLQKI 9 95 498.8082980029684 995.6020430727368 2 498.8080627322197 MULTI CID FTMS 0 0 0 18788 2081680.625 1.0 0 0.0 3 Unmodified _GVPELLQKI_ ENSG00000076513|ENST00000261739|ANKRD13A 36.12702656103203 0.0967173616627612 3 [VG]PE{I|L}{I|L}QK{I|L} 9 0 + 58.501 0.0 0.0 5.8759 5.8759 82.816 0.0 0.0 0.0 2.6373497057826825 13.46787486224656 2.6373497057826825 4.771212547196626 0 0.2887254899964357 2.0 0.0 0.3252574989159953 + + [VG]PE{I|L}{I|L}QK{I|L};[VG]P{I|L}E{I|L}QK{I|L};[VG]PE{I|L}{I|L}[AG]K{I|L};[VG]P{I|L}E{I|L}[AG]K{I|L} 5.8759;5.3967;4.9511;4.4718 +;-;-;- + 268 + 1 1.294 60247.8 1.0 13009 5780 18788 HBL1_DMSO_200M_050219_1,18791 HBL1_DMSO_200M_050219_1,18791,GVPELLQKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18792 90.049 49.0 1858400.0 25 0 326170.0 + 4945 DGLVVLKI 8 94 428.7789292609092 855.5433055886184 2 428.7788268923759 MULTI CID FTMS 0 0 0 18788 1228738.375 0.254871963870585 -2 0.250274658203125 4 Unmodified _DGLVVLKI_ ENSG00000147677|ENST00000521861|EIF3H;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 39.957323273325 0.2350051964751539 3 [DG]{I|L}VV{I|L}K{I|L} 8 0 [DG]{I|L} + + 40.756 15.017 5.2666 4.7637 4.7637 54.859 0.0 0.0 0.0 0.0 25.5169004960316 0.0 0.0 0 1.1861818737241734 0.0 0.0 0.2396518287104437 + + [DG]{I|L}VV{I|L}K{I|L} 4.7637 + + 154 + 1 1.294 74609.0 1.0 13010 5780 18788 HBL1_DMSO_200M_050219_1,18792 HBL1_DMSO_200M_050219_1,18792,DGLVVLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18793 90.05 31.0 1641800.0 25 0 137230.0 + 33586 SIPDFPMHLA 10 76 564.2809876429643 1126.5474223527283 2 564.2814208865166 MULTI CID FTMS 0 0 0 18788 1041607.8125 0.6687636937103234 -1 0.139739990234375 5 Unmodified _SIPDFPMHLA_ ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1 26.88365393820708 0.3646707531412818 3 {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}HA{I|L} 10 2 + 38.126 0.0 0.0 3.3844 3.3844 82.724 0.0 0.0 0.0 11.427127331550864 0.6348625752110593 0.6348625752110593 21.48062535455437 0 0.3054621874040891 2.0 0.0 0.0 {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}HA{I|L};{[TV]|[{I|L}S]}P[WY]{[YD]|[{M(Oxidation (M))|F}M]}A{I|L} 3.3844;1.4776 -;- 158 + 1 1.294 47002.8 1.0 13011 5780 18788 HBL1_DMSO_200M_050219_1,18793 HBL1_DMSO_200M_050219_1,18793,SIPDFPMHLA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18794 90.052 68.0 757940.0 25 0 121190.0 18698 LAIWEASL 8 75 451.75254133747273 901.4905297417456 2 451.7529174685478 MULTI CID FTMS 0 0 0 18788 948721.125 0.040662256922309 49 -5.402114868164063 6 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 20.871210003555333 0.6025813472596342 3 [{I|L}A][WE]S 5 3 34.207 0.0 0.0 3.7945 0.0 0.0 0.0 312.1914788120276 312.1914788120276 15.394680962404124 0.0 0.0 0.0 0 0.5 2.0 0.75 0.0 [{I|L}A][WE]S 3.7945 - 76 1 1.294 46756.1 1.0 13012 5780 18788 HBL1_DMSO_200M_050219_1,18794 HBL1_DMSO_200M_050219_1,18794,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18795 90.055 136.0 1037400.0 25 0 159790.0 + + 30393 RIINGIIISV 10 103 549.8476780522376 1097.680803171275 2 549.8478271365166 MULTI CID FTMS 0 0 0 18788 723892.0625 1.0 0 0.0 7 Unmodified _RARQRLLSV_ nc|ENSG00000122986|Q96D96-4|HVCN1;ENSG00000122986|ENST00000242607|HVCN1;HVCN1|p.R208Q|1|0.41|ENSG00000122986|chr12:110651237-110651237|C/T|missense_variant;nc|ENSG00000122986|Q96D96-3|HVCN1;nc|ENSG00000122986|Q96D96-2|HVCN1;chr12:110661448-110688625|40|10.35|0.61|4.09|-|ENST00000439744|HVCN1,HVCN1 24.99096001346401 0.2132109383330889 3 {I|L}{I|L}RDG{I|L}{I|L}{I|L}SV 10 -1 + 59.138 0.0 0.0 5.3875 5.3875 88.048 0.0 0.0 0.0 5.060839930815519 26.845217672234227 5.060839930815519 15.752574989159951 0 1.1549471895720984 0.958607314841775 0.0 0.0 {I|L}{I|L}RDG{I|L}{I|L}{I|L}SV;{I|L}{I|L}R{[RE]|[WV]}{I|L}{I|L}W;{[CP]|[EA]}{I|L}[K{I|L}]{I|L}{I|L}{I|L}W;[{I|L}P]C[K{I|L}]{I|L}{I|L}{I|L}SV 5.3875;3.9525;3.5466;2.7884 -;-;-;- 510 1 1.294 112356.6 1.0 13013 5780 18788 HBL1_DMSO_200M_050219_1,18795 HBL1_DMSO_200M_050219_1,18795,RARQRLLSV False False RIINGIIISV 90.054635 549.847827136517 0.0 18788.0 nc|ENSG00000122986|Q96D96-4|HVCN1;;ENSG00000122986|ENST00000242607|HVCN1;;HVCN1|p.R208Q|1|0.41|ENSG00000122986|chr12:110651237-110651237|C/T|missense_variant;;nc|ENSG00000122986|Q96D96-3|HVCN1;;nc|ENSG00000122986|Q96D96-2|HVCN1;;chr12:110661448-110688625|40|10.35|0.61|4.09|-|ENST00000439744|HVCN1,HVCN1 5.733334859212239 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18796 90.057 117.0 534100.0 25 0 33536.0 + 45529 YTVEDLATQL 10 113 576.7920728341842 1151.5695927351685 2 576.7920410037041 MULTI CID FTMS 0 0 0 18788 691441.75 0.1600431608999789 3 -0.373138427734375 8 Unmodified _YTVEDLATQL_ ENSG00000124571|ENST00000265351|XPO5 52.268347100219714 0.0668375294751462 3 {NN|[MP]|[D{I|L}]|[EV]}DTY{I|L} 6 5 22.489 0.0 0.0 1.9529 0.0 0.0 0.0 428.2151429102991 428.2151429102991 6.210149894766708 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.6861818737241735 0.0 {NN|[MP]|[D{I|L}]|[EV]}DTY{I|L} 1.9529 - 1014 1 1.294 53340.9 1.0 13014 5780 18788 HBL1_DMSO_200M_050219_1,18796 HBL1_DMSO_200M_050219_1,18796,YTVEDLATQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18797 90.065 438.0 173430.0 25 0 7472.4 -1 0 89 1193.5502076194125 3577.628793458438 3 1194.219287097454 MULTI CID FTMS 0 0 0 18788 408681.71875 1.0 0 0.0 9 3 {I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 15 -1 35.249 0.0 0.0 0.98527 0.0 0.0 1834.8190622532725 0.0 1834.8190622532725 0.0 14.638787285696964 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 0.98527 - 6681 + 1 1.294 55987.6 1.0 13015 5780 18788 HBL1_DMSO_200M_050219_1,18797 HBL1_DMSO_200M_050219_1,18797, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18798 90.07 248.0 414110.0 25 0 35530.0 + 9999 FPKLELSV 8 139 466.77428524042034 931.5340175476408 2 466.7765685915947 MULTI CID FTMS 0 0 0 18788 353709.59375 0.6331285200820879 -8 0.8450164794921875 10 Unmodified _FPKLELSV_ ENSG00000144028|ENST00000323853|SNRNP200 53.832793166522166 0.1212192986213991 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}E{I|L}SV 8 0 + 53.37 0.0 0.0 5.7293 5.7293 82.301 0.0 0.0 0.0 19.5205343810445 5.133418048066787 5.133418048066787 4.771212547196626 0 0.6549471895720984 1.5228787452803376 0.4247425010840047 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}E{I|L}SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}ES{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}SE{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}[{I|L}T]DV;[KP]{M(Oxidation (M))|F}{I|L}E{I|L}SV;[KP]{I|L}{M(Oxidation (M))|F}E{I|L}SV;[VS]VVVM{I|L}SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}S[{I|L}V]E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}[W{I|L}]E;[KP]{I|L}{M(Oxidation (M))|F}ES{I|L}V 5.7293;5.2171;4.6042;3.7164;3.6337;3.6337;3.4286;3.2406;3.1653;3.1215 +;-;-;-;-;-;-;-;-;- + 1107 1 1.294 83957.8 1.0 13016 5780 18788 HBL1_DMSO_200M_050219_1,18798 HBL1_DMSO_200M_050219_1,18798,FPKLELSV True True FPKLELSV 90.06955 466.776568591595 4678683.0 18788.0 ENSG00000144028|ENST00000323853|SNRNP200 4.435788631439209 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18799 90.073 148.0 558020.0 25 0 75987.0 + 45758 YYISPRLTF 9 91 580.3108966406983 1158.6072403481965 2 580.3116943240166 MULTI CID FTMS 0 0 0 18788 351546.5 0.0099382856143869 17 -1.8548431396484373 11 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 17.11289562659939 0.3734572693229295 3 YY{I|L}S 4 5 60.433 0.0 0.0 5.216 0.0 0.0 0.0 629.3430702400833 629.3430702400833 48.83925646871916 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + YY{I|L}S 5.216 + + 92 + 1 1.294 65281.6 1.0 13017 5780 18788 HBL1_DMSO_200M_050219_1,18799 HBL1_DMSO_200M_050219_1,18799,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18800 90.082 566.0 379330.0 25 0 31446.0 + -1 LPSKFFLPCSM 11 159 448.2209794477327 1341.641108943398 3 448.2208740115166 MULTI CID FTMS 0 0 0 18788 324510.1875 0.5390184358865381 -1 0.139739990234375 12 Carbamidomethyl (C),Oxidation (M) _LPSKFFLPC(Carbamidomethyl (C))SM(Oxidation (M))_ REV__ENST00000444717.1_1_20:33867537-33867791:-|nuORF 7.846045518447754 0.8381297814158264 3 {I|L}SP[R{I|L}]T{M(Oxidation (M))|F} 7 -1 34.871 0.0 0.0 2.5991 0.0 0.0 509.1592741362383 0.0 509.1592741362383 0.0 23.61212875070397 0.0 0.0 0 0.6861818737241735 0.0 0.8352587893338912 0.7753187046026268 {I|L}SP[R{I|L}]T{M(Oxidation (M))|F} 2.5991 - 158 + 1 1.294 173744.3 1.0 13018 5780 18788 HBL1_DMSO_200M_050219_1,18800 HBL1_DMSO_200M_050219_1,18800,LPSKFFLPCSM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18801 90.092 537.0 378810.0 25 0 34109.0 + 34015 SLITPLQAV 9 172 471.2869254398679 940.5592979465358 2 471.2867614626884 MULTI CID FTMS 0 0 0 18788 319495.59375 0.6582359073025728 -1 0.139739990234375 13 Unmodified _SLITPLQAV_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 88.90359156742426 0.0153595091083554 3 {[TV]|[{I|L}S]}{I|L}TP{I|L} 6 3 60.161 0.0 0.0 6.3963 0.0 0.0 0.0 313.1487162581463 313.1487162581463 34.65389041719169 0.0 0.0 0.0 0 1.2059771852360797 2.0 1.1725924581435252 0.0 + {[TV]|[{I|L}S]}{I|L}TP{I|L} 6.3963 + + 1193 1 1.294 155236.8 1.0 13019 5780 18788 HBL1_DMSO_200M_050219_1,18801 HBL1_DMSO_200M_050219_1,18801,SLITPLQAV True True SLITPLQAV 90.091858 471.286761462688 9096242.0 18788.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 4.808277606964111 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18802 90.102 600.0 347540.0 25 0 52044.0 + 26951 PEALPVLL 8 162 426.2648951914162 850.5152374496324 2 426.2641174197197 MULTI CID FTMS 0 0 0 18788 300989.0 0.4954991884052245 6 -0.7156829833984375 14 Unmodified _PEALPVLL_ REV__ENSG00000197324|ENST00000359591|LRP10 23.1484247019978 0.5573009939494978 3 {[HG]|PP}EA{I|L}V{I|L}{I|L} 8 -1 + 26.839 0.0 0.0 3.1557 3.1557 71.678 0.0 0.0 0.0 2.884319767967476 6.817496819840656 2.884319767967476 2.884319767967476 0 0.6549471895720985 0.5376020021010439 0.0 0.0 {[HG]|PP}EA{I|L}V{I|L}{I|L};[{I|L}T]H[VG]V{I|L}{I|L};[EP]PA{I|L}V{I|L}{I|L};{[HG]|PP}EAV{I|L}{I|L}{I|L};{[HG]|PP}EA{I|L}{I|L}V{I|L};[{I|L}T]HAA{I|L}{I|L}{I|L};[VP][DV]PV{I|L}{I|L};[EP]PAV{I|L}{I|L}{I|L};[EP]AP{I|L}V{I|L}{I|L};[{I|L}T]H[VG]{I|L}V{I|L} 3.1557;2.8165;2.6488;2.5947;2.3541;2.2556;2.1882;2.0879;2.0879;2.015 -;-;-;-;-;-;-;-;-;- 204 1 1.294 162266.7 1.0 13020 5780 18788 HBL1_DMSO_200M_050219_1,18802 HBL1_DMSO_200M_050219_1,18802,PEALPVLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18803 90.11 431.0 277250.0 25 0 12032.0 + 18937 LDAFYLCL 8 139 957.4727529347372 956.465476468137 1 958.4623901247978 MULTI CID FTMS 0 0 0 -1 0 15 Unmodified _LDAFYLCL_ ENST00000254337.10_1_19:14071850-14072045:+|nuORF 24.67388899826682 0.525179942228231 3 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}[RH]QA 8 4 + 26.526 0.0 0.0 2.7733 2.7733 68.672 0.0 0.0 0.0 7.322109374746979 4.518795811890374 4.518795811890374 1.3033376849500655 0 0.4247425010840047 0.6575773191777937 0.6139829889124311 0.0 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}[RH]QA;{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}V{[HG]|PP}QA;{NN|[MP]|[D{I|L}]|[EV]}AV{M(Oxidation (M))|F}{[HG]|PP}QA;{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}YV{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}VY{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}AV[DP]V[QT];[TP]T{M(Oxidation (M))|F}[RH]QA;{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F}[RH]QA;{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}[PG]{I|L}[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[PG]MPS{I|L} 2.7733;2.637;2.3352;2.3009;2.1448;2.0111;2.0078;2.0078;1.989;1.9655 -;-;-;-;-;-;-;-;-;- 3706 1 1.294 80608.0 1.0 13021 5780 18788 HBL1_DMSO_200M_050219_1,18803 HBL1_DMSO_200M_050219_1,18803,LDAFYLCL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18804 90.122 602.0 268640.0 25 0 63709.0 + 24914 MPPEPIII 8 163 455.259313833082 908.504074732964 2 455.2594787478447 MULTI CID FTMS 0 0 0 18788 272918.78125 0.5606235891973892 6 -0.7156829833984375 16 Unmodified _MPPEPIII_ ENSG00000066117|ENST00000394963|SMARCD1;nc|ENSG00000066117|Q96GM5-2|SMARCD1 38.15118350030904 0.2652218139009398 3 [EP]PMP{I|L}{I|L}{I|L} 8 2 + 50.04 0.0 0.0 5.5079 5.5079 77.061 0.0 0.0 0.0 4.404923593575006 16.40978057358332 4.404923593575006 1.7609125905568137 0 0.5 0.4685210829577448 0.0 0.0 [EP]PMP{I|L}{I|L}{I|L};[EP]P{I|L}PM{I|L}{I|L};[{I|L}P][EP]PM{I|L}{I|L};[EP]PP{I|L}M{I|L}{I|L};{[HG]|PP}EMP{I|L}{I|L}{I|L};[EP]PPM{I|L}{I|L}{I|L};{[HG]|PP}E{I|L}PM{I|L}{I|L};[EP]P{I|L}P{I|L}M{I|L};{NN|[MP]|[D{I|L}]|[EV]}PEP{I|L}{I|L}{I|L};[{I|L}P][EP]P{I|L}M{I|L} 5.5079;5.3141;5.0231;4.693;4.5542;4.3617;4.3604;4.2386;3.9692;3.9475 -;-;-;-;-;-;-;-;+;- + 583 1 1.294 127603.4 1.0 13022 5780 18788 HBL1_DMSO_200M_050219_1,18804 HBL1_DMSO_200M_050219_1,18804,MPPEPIII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18805 90.131 523.0 396820.0 25 0 16758.0 -1 LCYSSHSECVT 11 180 671.7756936121982 1341.5368342911963 2 671.7764770388603 MULTI CID FTMS 0 0 0 18788 246206.515625 0.2932495104510922 -4 0.4386672973632812 17 2 Carbamidomethyl (C) _LC(Carbamidomethyl (C))YSSHSEC(Carbamidomethyl (C))VT_ ENST00000367450.7_1_1:192998689-192998773:-|nuORF 13.042465956692816 0.7638483625850725 3 [EP]GDWSETV 9 -1 55.169 0.0 0.0 4.1124 0.0 0.0 0.0 338.08251805557194 338.08251805557194 30.24735947860492 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.055462187404089 0.0 [EP]GDWSETV 4.1124 - 1651 1 1.294 150876.8 1.0 13023 5780 18788 HBL1_DMSO_200M_050219_1,18805 HBL1_DMSO_200M_050219_1,18805,LCYSSHSECVT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18806 90.141 551.0 424880.0 25 0 59007.0 + 29702 QPIDNLLAV 9 185 491.7824032388236 0 491.7823669314384 PEAK CID FTMS 0 0 0 18788 237071.921875 1.0 0 0.0 18 Unmodified _QPIDNLLAV_ REV__ENSG00000115524|ENST00000335508|SF3B1;REV__nc|ENSG00000115524|O75533-2|SF3B1 36.12702656103203 0.0807574182900477 3 {I|L}GGDQ 5 -1 18.447 0.0 0.0 1.8794 0.0 0.0 301.19858989241715 207.1144198053344 508.3130096977516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6307196863200843 {I|L}GGDQ 1.8794 - 1053 + 1 1.294 177935.1 1.0 13024 5780 18788 HBL1_DMSO_200M_050219_1,18806 HBL1_DMSO_200M_050219_1,18806,QPIDNLLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18807 90.15 542.0 289110.0 25 0 31336.0 + 37738 TLQVTSQIL 9 184 501.7951633006509 1001.575773668102 2 501.7942382693291 MULTI CID FTMS 0 0 0 18788 246025.71875 0.1185076146429271 6 -0.7156829833984375 19 Unmodified _TLQVTSQIL_ ENSG00000167674|ENST00000616600|HDGFL2;nc|ENSG00000167674|Q7Z4V5-2|HDGFL2;nc|ENSG00000167674|Q7Z4V5-3|HDGFL2;nc|ENSG00000167674|Q7Z4V5-4|HDGFL2 37.97399986684836 0.0865783450051559 3 [{I|L}T]QVT 5 4 27.457 0.0 0.0 2.7414 0.0 0.0 0.0 456.2431680374957 456.2431680374957 7.954527003617816 0.0 0.0 0.0 0 0.0 1.0 0.5941876774005248 0.6989700043360187 + [{I|L}T]QVT 2.7414 + + 1506 1 1.294 119616.4 1.0 13025 5780 18788 HBL1_DMSO_200M_050219_1,18807 HBL1_DMSO_200M_050219_1,18807,TLQVTSQIL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18808 90.161 556.0 414520.0 25 0 45628.0 + 15209 IPFDPKFI 8 192 488.7788700666022 975.5431872000044 2 488.7763854861259 MULTI CID FTMS 0 0 0 18788 245087.71875 0.8015191322818114 -1 0.139739990234375 20 Unmodified _IPFDPKFI_ ENSG00000006712|ENST00000221265|PAF1;ENST00000416728.3_1_19:39880170-39881561:-|nuORF;ENST00000595797.5_1_19:39880250-39881561:-|nuORF;ENST00000597365.1_1_19:39880707-39881561:-|nuORF;nc|ENSG00000006712|Q8N7H5-2|PAF1;nc|ENSG00000006712|Q8N7H5-3|PAF1 37.97399986684836 0.2681860861828418 3 {I|L}P{M(Oxidation (M))|F}DPK{M(Oxidation (M))|F}{I|L} 8 0 + 70.827 0.0 0.0 7.2602 7.2602 89.81 0.0 0.0 0.0 31.638568026386693 7.92391689498254 7.92391689498254 7.92391689498254 0 0.7742275032520141 1.5228787452803376 0.0 0.0 + + {I|L}P{M(Oxidation (M))|F}DPK{M(Oxidation (M))|F}{I|L};{I|L}P{M(Oxidation (M))|F}DPK{I|L}{M(Oxidation (M))|F};{I|L}{I|L}MDPK{M(Oxidation (M))|F}{I|L};{I|L}P{M(Oxidation (M))|F}D{M(Oxidation (M))|F}[KP]{I|L};{I|L}{I|L}MDPK{I|L}{M(Oxidation (M))|F};{I|L}P{M(Oxidation (M))|F}D{I|L}[KP]{M(Oxidation (M))|F};{I|L}{I|L}MD{M(Oxidation (M))|F}[KP]{I|L};{I|L}P{M(Oxidation (M))|F}[VP]HPG{I|L};{I|L}P{M(Oxidation (M))|F}[VP][SG]{M(Oxidation (M))|F}{I|L};{I|L}P{M(Oxidation (M))|F}[VP]HPAV 7.2602;6.448;6.0781;5.4663;5.2658;4.7352;4.2841;3.9715;3.9534;3.8904 +;-;-;-;-;-;-;-;-;- + 1984 + 1 1.294 175890.5 1.0 13026 5780 18788 HBL1_DMSO_200M_050219_1,18808 HBL1_DMSO_200M_050219_1,18808,IPFDPKFI False True IPFDPKFI 90.161056 488.776385486126 1286840.25 18788.0 ENSG00000006712|ENST00000221265|PAF1;;ENST00000595797.5_1_19:39880250-39881561:-|nuORF;;ENST00000597365.1_1_19:39880707-39881561:-|nuORF;;nc|ENSG00000006712|Q8N7H5-2|PAF1;;nc|ENSG00000006712|Q8N7H5-3|PAF1;;ENST00000416728.3_1_19:39880170-39881561:-|nuORF 4.004559675852458 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18810 90.165 3.9 15842000.0 25 0 1441500.0 + 35437 STLHLVLRL 9 64 526.3348604530025 1050.655167972805 2 526.3351318240166 MULTI CID FTMS 0 0 0 18809 10986182.0 0.3840610119018487 1 -0.0972747802734375 1 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 47.74868867922204 0.0453060283459952 3 {[MG]|[TS]}{I|L}H{I|L}V{I|L}R{I|L} 9 0 + 58.554 0.0 0.0 5.573 5.573 82.092 0.0 0.0 0.0 47.29444335234815 9.965377210613669 9.965377210613669 5.0 0 1.924742501084005 0.0 0.0 0.2887254899964357 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}R{I|L};{I|L}{[MG]|[TS]}H{I|L}V{I|L}R{I|L};{[MG]|[TS]}{I|L}H{I|L}{I|L}VR{I|L};{[MG]|[TS]}{I|L}{I|L}HV{I|L}R{I|L};{I|L}{[MG]|[TS]}H{I|L}{I|L}VR{I|L};{I|L}{[MG]|[TS]}{I|L}HV{I|L}R{I|L};{[MG]|[TS]}{I|L}{I|L}H{I|L}VR{I|L};{I|L}{[MG]|[TS]}{I|L}H{I|L}VR{I|L} 5.573;5.0972;5.0012;4.643;4.5253;4.1671;4.0712;3.5953 +;-;-;-;-;-;-;- + 127 + 1 1.301 52940.7 1.0 13027 5781 18809 HBL1_DMSO_200M_050219_1,18810 HBL1_DMSO_200M_050219_1,18810,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18811 90.167 3.5 19757000.0 25 0 1633500.0 + 29723 QPLPVILHV 9 80 508.318790644387 1014.623028355574 2 508.3188964724541 MULTI CID FTMS 0 0 0 18809 13404583.0 0.7090957517997732 1 -0.0972747802734375 2 Unmodified _QPLPVILHV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 40.44857923139169 0.0729940656229577 3 [QP]{I|L}PV{I|L}{I|L}HV 9 0 + 45.913 0.0 0.0 4.5251 4.5251 72.749 0.0 0.0 0.0 5.642492736872597 1.2371250542002343 1.2371250542002343 1.2371250542002343 0 0.6861818737241735 0.0 0.0 0.0 + + [QP]{I|L}PV{I|L}{I|L}HV;[QP]{I|L}PV{I|L}{I|L}VH 4.5251;4.4032 +;- + 150 + 1 1.301 60440.3 1.0 13028 5781 18809 HBL1_DMSO_200M_050219_1,18811 HBL1_DMSO_200M_050219_1,18811,QPLPVILHV True True QPLPVILHV 90.166506 508.318896472454 364809184.0 18809.0 nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;;ENSG00000171681|ENST00000261168|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;;ENST00000537653.5_1_12:14576849-14628955:+|nuORF 7.225433667500813 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18812 90.168 20.0 1629000.0 25 0 508290.0 43422 WRMKRKTILWK 11 47 515.9782255317241 1544.9128471953725 3 515.9782592654228 MULTI CID FTMS 0 0 0 18809 2444519.75 0.9965506255450002 -1 0.119903564453125 3 Unmodified _WRMKRKTILWK_ ENST00000346991.9_1_15:40939257-40942558:+|nuORF 0.0 0.8751479354844584 3 {I|L} 1 10 11.109 0.0 0.0 0.71909 0.0 0.0 1413.8176761522066 0.0 1413.8176761522066 0.0 11.10924374808178 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.71909 + + 10 + 1 1.301 42412.9 1.0 13029 5781 18809 HBL1_DMSO_200M_050219_1,18812 HBL1_DMSO_200M_050219_1,18812,WRMKRKTILWK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18813 90.169 29.0 2617200.0 25 0 547440.0 + 12525 GVGIHATK 8 66 391.73128601197607 781.4480190907522 2 391.7316467165947 MULTI CID FTMS 0 0 0 18809 1798797.25 1.0 0 0.0 4 Unmodified _GVGIHATK_ REV__ENSG00000081923|ENST00000648908|ATP8B1;REV__ENSG00000143515|ENST00000368489|ATP8B2;REV__nc|ENSG00000143515|P98198-3|ATP8B2;REV__nc|ENSG00000143515|P98198|ATP8B2 2.889219685676258 0.8067950007271085 3 {[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}{I|L}{M(Oxidation (M))|F} 6 -1 + 44.575 0.0 0.0 5.7041 5.7041 90.804 0.0 0.0 0.0 10.162326625411763 36.61597682053261 10.162326625411763 44.57477699397336 0 0.8494850021680094 0.0 0.0 0.6694451763165201 {[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}{I|L}{M(Oxidation (M))|F} 5.7041 - 33 1 1.301 66477.9 1.0 13030 5781 18809 HBL1_DMSO_200M_050219_1,18813 HBL1_DMSO_200M_050219_1,18813,GVGIHATK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18814 90.17 24.0 640330.0 25 0 95099.0 -1 AKVMEAVLL 9 43 495.2900240193716 988.5654951055432 2 495.2886535525322 MULTI CID FTMS 0 0 0 18809 1775609.875 0.8652241552663302 -1 0.119903564453125 5 Oxidation (M) _AKVM(Oxidation (M))EAVLL_ ENST00000544552.5_1_11:73630047-73635695:+|nuORF 7.289230182591677 0.6602208344931196 3 {I|L} 1 -1 13.979 0.0 0.0 1.4141 0.0 0.0 857.4704766502682 0.0 857.4704766502682 0.0 13.979400086720377 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4141 + + 7 + 1 1.301 18010.8 1.0 13031 5781 18809 HBL1_DMSO_200M_050219_1,18814 HBL1_DMSO_200M_050219_1,18814,AKVMEAVLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18815 90.171 41.0 450600.0 25 0 41944.0 + 24665 MLTKTKRR 8 40 517.3185843076021 1032.6226156820042 2 518.3219482302666 MULTI CID FTMS 0 0 0 18809 1270727.75 0.7875224694955585 4 -0.4368057250976562 6 Unmodified _MLTKTKRR_ REV__ENSG00000181449|ENST00000325404|SOX2 2.889219685676258 0.8067950007271085 3 H 1 -1 4.6041 0.0 0.0 0.44586 0.0 0.0 510.3045137306354 382.2337435358032 892.5382572664386 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.44586 - 4 + 1 1.301 21563.0 1.0 13032 5781 18809 HBL1_DMSO_200M_050219_1,18815 HBL1_DMSO_200M_050219_1,18815,MLTKTKRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18816 90.172 41.0 423070.0 25 0 37123.0 4184 DAPIVAHLW 9 46 511.27712008281816 1020.5396872324364 2 511.2770873904228 MULTI CID FTMS 0 0 0 18809 1005953.0 0.1146656985359492 -3 0.37017822265625 7 Unmodified _DAPIVAHLW_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 9.347437153973935 0.588369872918737 3 {[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P[HT]P 9 6 21.373 0.0 0.0 2.0943 0.0 0.0 0.0 82.06692682437733 82.06692682437733 7.877874695140154 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[DA]|[EG]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P[HT]P 2.0943 - 16 + 1 1.301 18813.3 1.0 13033 5781 18809 HBL1_DMSO_200M_050219_1,18816 HBL1_DMSO_200M_050219_1,18816,DAPIVAHLW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18817 90.174 60.0 141480.0 25 0 17479.0 + 31341 RMRLYKKRLLW 11 26 521.6538284131401 1561.9396558396202 3 521.6537963747978 MULTI CID FTMS 0 0 0 18809 823796.8125 1.0 0 0.0 8 Unmodified _RMRLYKKRLLW_ REV__ENSG00000197535|ENST00000399233|MYO5A;REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A;REV__nc|ENSG00000197535|Q9Y4I1|MYO5A 0.0 0.8751479354844584 3 V 1 -1 12.218 0.0 0.0 0.78226 0.0 0.0 1444.8600106143256 0.0 1444.8600106143256 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.78226 - 3 + 1 1.301 16332.3 1.0 13034 5781 18809 HBL1_DMSO_200M_050219_1,18817 HBL1_DMSO_200M_050219_1,18817,RMRLYKKRLLW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18818 90.176 83.0 553470.0 25 0 139650.0 + 30939 RKKRHVDFVAK 11 54 461.9489857904729 1382.8251279716187 3 461.9484130740166 MULTI CID FTMS 0 0 0 18809 616432.3125 0.6594817124175507 -2 0.2596435546875 9 Unmodified _RKKRHVDFVAK_ REV__ENST00000447263.1_1_1:39980824-39982159:+|nuORF 0.3070304955306653 0.8736993455979228 3 {I|L} 1 -1 11.42 0.0 0.0 0.82584 0.0 0.0 1251.7298806345077 0.0 1251.7298806345077 0.0 8.321039490384035 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.82584 - 3 + 1 1.301 53905.7 1.0 13035 5781 18809 HBL1_DMSO_200M_050219_1,18818 HBL1_DMSO_200M_050219_1,18818,RKKRHVDFVAK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18819 90.179 176.0 532750.0 25 0 16944.0 -1 0 92 976.1135893430628 2925.318938629388 3 976.7820922732352 MULTI CID FTMS 0 0 0 18809 511369.59375 1.0 0 0.0 10 3 {[QN]|[E{I|L}]|[KN]}SVV{I|L}TVV 9 -1 28.105 0.0 0.0 0.96075 0.0 0.0 0.0 1982.7487841706568 1982.7487841706568 2.338942739842249 0.0 0.0 0.0 0 0.0 1.154901959985743 1.5743923658886183 0.0 {[QN]|[E{I|L}]|[KN]}SVV{I|L}TVV 0.96075 - 2024 1 1.301 71294.1 1.0 13036 5781 18809 HBL1_DMSO_200M_050219_1,18819 HBL1_DMSO_200M_050219_1,18819, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18820 90.181 62.0 1053900.0 25 0 93632.0 + 2826 AVADELFML 9 96 504.7562471835764 1007.4979414339527 2 504.7566711306572 MULTI CID FTMS 0 0 0 18809 487382.53125 0.2962693322440152 2 -0.25323486328125 11 Unmodified _AVADELFML_ ENSG00000132671|ENST00000255008|SSTR4 32.116972079565 0.1225432171549407 3 AVRDNW{M(Oxidation (M))|F} 7 5 54.06 0.0 0.0 5.3658 0.0 0.0 0.0 116.05101190738516 116.05101190738516 38.57586369482071 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.3807196863200844 0.4247425010840047 AVRDNW{M(Oxidation (M))|F} 5.3658 - 321 + 1 1.301 53082.9 1.0 13037 5781 18809 HBL1_DMSO_200M_050219_1,18820 HBL1_DMSO_200M_050219_1,18820,AVADELFML True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18821 90.189 441.0 267640.0 25 0 111570.0 + 31662 RRGRRRWHPLR 11 90 773.4643479606364 1544.9141429880726 2 773.4638549685478 MULTI CID FTMS 0 0 0 18809 432613.53125 1.0 0 0.0 12 Unmodified _RRGRRRWHPLR_ REV__ENST00000250894.8_2_16:1818305-1818896:+|nuORF 0.0 0.8751479354844584 3 {I|L} 1 -1 9.8329 0.0 0.0 0.63647 0.0 0.0 1413.819002462485 0.0 1413.819002462485 0.0 5.8534811358448735 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.63647 + + 19 + 1 1.301 100556.1 1.0 13038 5781 18809 HBL1_DMSO_200M_050219_1,18821 HBL1_DMSO_200M_050219_1,18821,RRGRRRWHPLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18822 90.196 442.0 485590.0 25 0 54490.0 + -1 VAECSPPCLSV 11 173 581.2694658896157 1160.5243788460314 2 581.2698242068291 MULTI CID FTMS 0 0 0 18809 422835.25 1.0 0 0.0 13 Carbamidomethyl (C) _VAEC(Carbamidomethyl (C))SPPCLSV_ REV__nc|ENSG00000197558|A2VEC9|SSPOP 13.90604991867851 0.7458848613461305 3 [TP]{M(Oxidation (M))|F}{I|L}YV{I|L}Y 8 -1 41.729 0.0 0.0 3.5957 0.0 0.0 0.0 160.95452956308137 160.95452956308137 11.355252928310058 0.0 0.0 0.0 0 0.242992819099939 1.0457574905606752 0.9456290139465234 0.0 [TP]{M(Oxidation (M))|F}{I|L}YV{I|L}Y 3.5957 - 1243 1 1.301 160657.3 1.0 13039 5781 18809 HBL1_DMSO_200M_050219_1,18822 HBL1_DMSO_200M_050219_1,18822,VAECSPPCLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18823 90.204 453.0 449990.0 25 0 33130.0 + 15663 IQLTQMSLQL 10 198 587.8269945068423 1173.6394360804843 2 587.8270141482353 MULTI CID FTMS 0 0 0 18809 410885.5 1.0 0 0.0 14 Unmodified _IQLTQMSLQL_ ENSG00000188352|ENST00000338382|FOCAD 103.41943736471065 0.0068563894390004 3 [Q{I|L}]{I|L}T[WC(Carbamidomethyl (C))]{I|L}Q{I|L} 9 3 + 71.825 0.0 0.0 6.1199 6.1199 78.132 0.0 0.0 0.0 17.911036402393336 16.478174818886373 16.478174818886373 1.249387366082999 0 1.4896518287104437 2.0 0.5501648626366046 1.7658715643802767 [Q{I|L}]{I|L}T[WC(Carbamidomethyl (C))]{I|L}Q{I|L};[Q{I|L}]{I|L}T{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}Q{I|L};[Q{I|L}]{I|L}T[MT]N{I|L}Q{I|L};[Q{I|L}]{I|L}T[Q{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L};[Q{I|L}]{I|L}T[WC(Carbamidomethyl (C))]{I|L}[AG]{I|L};[Q{I|L}]T{I|L}[WC(Carbamidomethyl (C))]{I|L}Q{I|L};[Q{I|L}]{I|L}[WR]{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L};[Q{I|L}]{I|L}T{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}[AG]{I|L};[Q{I|L}]{I|L}T{[MS]|[{M(Oxidation (M))|F}A]}[AG]{I|L}Q{I|L};[Q{I|L}]{I|L}[W{M(Oxidation (M))|F}]N{I|L}Q{I|L} 6.1199;6.0134;5.8244;5.6098;5.3353;5.2896;5.237;5.2326;5.2326;5.2056 -;-;-;-;-;-;-;-;-;- 4692 1 1.301 148404.2 1.0 13040 5781 18809 HBL1_DMSO_200M_050219_1,18823 HBL1_DMSO_200M_050219_1,18823,IQLTQMSLQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18824 90.208 152.0 392430.0 25 0 38697.0 -1 0 66 608.9637622088569 1823.8694572267705 3 608.9644042849541 MULTI CID FTMS 0 0 0 18809 370774.0625 0.578514665399452 1 -0.0972747802734375 15 3 [H{I|L}]Q[KG]VY{I|L} 8 -1 39.914 0.0 0.0 2.1884 0.0 0.0 0.0 882.3238586893253 882.3238586893253 26.268732363855 0.0 0.0 0.0 0 1.5 1.3979400086720375 0.0 0.0 [H{I|L}]Q[KG]VY{I|L} 2.1884 - 154 1 1.301 50554.4 1.0 13041 5781 18809 HBL1_DMSO_200M_050219_1,18824 HBL1_DMSO_200M_050219_1,18824, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18825 90.218 571.0 361840.0 25 0 52026.0 + 33979 SILGKFAVV 9 187 467.2910441897651 1398.8513031694954 3 467.6240417361259 MULTI CID FTMS 0 0 0 18809 335371.125 1.0 0 0.0 16 Unmodified _SLIIMLRIWRV_ ENSG00000165819|ENST00000298717|METTL3;ENST00000537163.5_1_14:21967572-21971372:-|nuORF;nc|ENSG00000165819|Q86U44-2|METTL3 4.406150317652783 0.8543594311449257 3 V 1 10 13.495 0.0 0.0 0.96471 0.0 0.0 1281.7718257908805 0.0 1281.7718257908805 0.0 1.9268061001575632 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.96471 + + 989 + 1 1.301 168613.9 1.0 13042 5781 18809 HBL1_DMSO_200M_050219_1,18825 HBL1_DMSO_200M_050219_1,18825,SLIIMLRIWRV False False SILGKFAVV 90.217545 467.624041736126 0.0 18809.0 ENSG00000165819|ENST00000298717|METTL3;;ENST00000537163.5_1_14:21967572-21971372:-|nuORF;;nc|ENSG00000165819|Q86U44-2|METTL3 -0.0888883372147878 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18826 90.227 510.0 488500.0 25 0 16462.0 -1 0 138 943.9720991859338 1885.929645438668 2 943.9745971560478 MULTI CID FTMS 0 0 0 18809 285756.4375 0.7330500818089191 -7 0.782989501953125 17 3 [{I|L}T][{I|L}T][QP]T{I|L}{I|L}G 10 -1 43.403 0.0 0.0 2.3014 0.0 0.0 0.0 845.3269381516645 845.3269381516645 0.0025457155767583 0.0 0.0 0.0 0 0.25 2.0 0.0 0.4247425010840047 [{I|L}T][{I|L}T][QP]T{I|L}{I|L}G 2.3014 - 11379 + 1 1.301 158671.8 1.0 13043 5781 18809 HBL1_DMSO_200M_050219_1,18826 HBL1_DMSO_200M_050219_1,18826, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18827 90.238 559.0 502090.0 25 0 76980.0 + 29441 QILDIPFHQV 10 152 605.3276843104711 1208.640815687742 2 605.3331176638603 MULTI CID FTMS 0 0 0 18809 257260.890625 0.4325244910828175 7 -0.7627029418945312 18 Unmodified _QLGLRMQHNL_ ENSG00000100416|ENST00000645190|TRMU;ENST00000496831.5_1_22:46731930-46742367:+|nuORF;ENST00000486620.5_1_22:46727586-46742367:+|nuORF;nc|ENSG00000100416|O75648-5|TRMU;nc|ENSG00000100416|O75648-2|TRMU 19.256988751693697 0.5244284437930726 3 [Q{I|L}]{I|L}D{I|L}P{M(Oxidation (M))|F}HN{I|L} 10 4 + 59.709 0.0 0.0 4.9402 4.9402 81.894 0.0 0.0 0.0 24.25968732272281 7.112044607530308 7.112044607530308 7.112044607530308 0 0.0 1.6989700043360187 0.0 1.285666875892183 [Q{I|L}]{I|L}D{I|L}P{M(Oxidation (M))|F}HN{I|L};[Q{I|L}]{I|L}D{I|L}P{M(Oxidation (M))|F}HQV;[Q{I|L}]{I|L}D{I|L}P{M(Oxidation (M))|F}HGG{I|L};[Q{I|L}]{I|L}RRC(Carbamidomethyl (C))HN{I|L};[Q{I|L}]{I|L}D{I|L}[YG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};[Q{I|L}]{I|L}D{I|L}P[DV]PS{I|L};[Q{I|L}]{I|L}D{I|L}P{M(Oxidation (M))|F}HGAV;[Q{I|L}]{I|L}D[KP][YG]Y{I|L};[Q{I|L}]{I|L}RRC(Carbamidomethyl (C))HQV;[Q{I|L}]{I|L}D[KP]YYG{I|L} 4.9402;4.3517;3.4474;3.1371;3.0411;2.8815;2.859;2.6195;2.5486;2.5393 -;-;-;-;-;-;-;-;-;- 1861 + 1 1.301 201793.5 1.0 13044 5781 18809 HBL1_DMSO_200M_050219_1,18827 HBL1_DMSO_200M_050219_1,18827,QLGLRMQHNL False False QILDIPFHQV 90.237545 605.33311766386 2397674.75 18809.0 ENSG00000100416|ENST00000645190|TRMU;;ENST00000496831.5_1_22:46731930-46742367:+|nuORF;;ENST00000486620.5_1_22:46727586-46742367:+|nuORF;;nc|ENSG00000100416|O75648-5|TRMU;;nc|ENSG00000100416|O75648-2|TRMU 7.312840938568115 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18828 90.248 576.0 422430.0 25 0 110500.0 + -1 VWPPPVSAL 9 154 964.9696109753072 1927.9246690174143 2 965.4708740115166 MULTI CID FTMS 0 0 0 18809 259316.765625 0.8978455631491636 -1 0.119903564453125 19 ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF 3 [NP]YKME{I|L}A{[HG]|PP}SM{I|L}DP[EP] 17 -1 + 64.264 0.0 0.0 3.3333 3.3333 71.082 0.0 0.0 0.0 2.090900683231581 3.416478465722456 2.090900683231581 2.090900683231581 0 0.6886218330464626 1.0 1.066901560044258 0.3252574989159953 [NP]YKME{I|L}A{[HG]|PP}SM{I|L}DP[EP];[MN]P[YK]E{I|L}A{[HG]|PP}SM{I|L}DP[EP];[MN][RV]D{M(Oxidation (M))|F}{I|L}HQSM{I|L}DP[EP];[NP]{I|L}[RH]A{NN|[MP]|[D{I|L}]|[EV]}QAEN{I|L}DP[EP];[NP]{I|L}N[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}QAEN{I|L}DP[EP];[NP]M[YK]E{I|L}A{[HG]|PP}SM{I|L}DP[EP];{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}QME{I|L}HQSM{I|L}DP[EP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EME{I|L}HQSM{I|L}DP[EP];[NP]{I|L}N[K{I|L}]W{M(Oxidation (M))|F}QSM{I|L}DP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NEAQ{NN|[MP]|[D{I|L}]|[EV]}ARDQ{[TV]|[{I|L}S]} 3.3333;3.2249;3.0874;3.0519;3.0519;3.0372;2.9705;2.9674;2.9279;2.9192 -;-;-;-;-;-;-;-;-;- 35640 1 1.301 159715.0 1.0 13045 5781 18809 HBL1_DMSO_200M_050219_1,18828 HBL1_DMSO_200M_050219_1,18828, False False VWPPPVSAL 90.247674 964.9699 2096111.375 18809.0 ENSG00000117298|ENST00000374893|ECE1;;ENST00000526194.5_1_1:21560049-21616919:-|nuORF 3.6290446122487383 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18829 90.258 605.0 225850.0 25 0 21567.0 -1 0 110 1092.5271588897317 2183.039764846264 2 1092.521289050579 MULTI CID FTMS 0 0 0 18809 248985.1875 1.0 0 0.0 20 3 {[HG]|PP}{M(Oxidation (M))|F}GMMARGMQHPPPPPP{[QN]|[E{I|L}]|[KN]} 20 -1 {[HG]|PP}{M(Oxidation (M))|F}GMMARGM + + 71.425 15.347 1.427 3.2718 3.2718 50.698 0.0 0.0 0.0 0.0 56.01850649356642 0.0 0.0 0 1.8807196863200843 0.0 0.3054621874040891 1.8494850021680087 {[HG]|PP}{M(Oxidation (M))|F}GMMARGMQHPPPPPP{[QN]|[E{I|L}]|[KN]} 3.2718 - 8536 + 1 1.301 90177.9 1.0 13046 5781 18809 HBL1_DMSO_200M_050219_1,18829 HBL1_DMSO_200M_050219_1,18829, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18831 90.263 1.4 25897000.0 25 0 3908000.0 + 26519 NVIDNLIVA 9 61 485.78227411203727 969.5499952908746 2 485.7827026247978 MULTI CID FTMS 0 0 0 18830 38581296.0 0.3199995700305736 2 -0.2325057983398437 1 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 32.30548876998284 0.1201446275138228 3 {[NV]|[RG]}E{I|L} 4 6 19.169 0.0 0.0 1.9771 0.0 0.0 0.0 511.2893806270652 511.2893806270652 7.179250024847264 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.4247425010840047 {[NV]|[RG]}E{I|L} 1.9771 - 57 1 1.301 36057.8 1.0 13047 5782 18830 HBL1_DMSO_200M_050219_1,18831 HBL1_DMSO_200M_050219_1,18831,NVIDNLIVA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18832 90.264 7.3 5875900.0 25 0 623210.0 + 16874 KIFEDIPTL 9 73 538.3049197819405 1074.595286630681 2 538.3055908083916 MULTI CID FTMS 0 0 0 18830 6288518.0 0.773467002874064 1 -0.1559600830078125 2 Unmodified _KIFEDIPTL_ ENSG00000163565|ENST00000295809|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16 32.30548876998284 0.1201446275138228 3 {I|L}R{M(Oxidation (M))|F}PT{I|L} 6 5 45.711 0.0 0.0 4.2538 0.0 0.0 329.1936227269778 0.0 329.1936227269778 0.0 21.274269105803327 0.0 0.0 0 0.0 0.0 1.5356668758921828 0.0 {I|L}R{M(Oxidation (M))|F}PT{I|L} 4.2538 - 167 + 1 1.301 42459.0 1.0 13048 5782 18830 HBL1_DMSO_200M_050219_1,18832 HBL1_DMSO_200M_050219_1,18832,KIFEDIPTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18833 90.265 21.0 2275300.0 25 0 295550.0 + 36344 SYPDNFLHI 9 84 553.2694585235851 1104.52436411397 2 553.2696411013603 MULTI CID FTMS 0 0 0 18830 1914943.375 0.4175035698700893 2 -0.2325057983398437 3 Unmodified _SYPDNFLHI_ ENSG00000057663|ENST00000369076|ATG5;nc|ENSG00000057663|Q9H1Y0-2|ATG5 19.256988751693697 0.3154191944385105 3 [DP]N{M(Oxidation (M))|F}{I|L}H 6 3 23.231 0.0 0.0 2.1033 0.0 0.0 0.0 378.167128972051 378.167128972051 5.6512431757402375 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 + [DP]N{M(Oxidation (M))|F}{I|L}H 2.1033 + + 113 1 1.301 41588.3 1.0 13049 5782 18830 HBL1_DMSO_200M_050219_1,18833 HBL1_DMSO_200M_050219_1,18833,SYPDNFLHI False True SYPDNFLHI 90.264959 553.26964110136 67035044.0 18830.0 nc|ENSG00000057663|Q9H1Y0-2|ATG5;;ENSG00000057663|ENST00000369076|ATG5 7.29970916112264 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18834 90.267 117.0 896630.0 25 0 118670.0 + 9186 FGGVLILIHR 10 95 375.5692990116058 1123.6860676350177 3 375.5692016482353 MULTI CID FTMS 0 0 0 18830 483249.59375 0.0135024903768305 12 -1.278778076171875 4 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 3 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 89.165 0.0 0.0 7.9351 7.9351 93.063 0.0 0.0 0.0 70.78824557628727 22.53444531929331 22.53444531929331 9.208187539523747 0 0.6747425010840047 2.0 0.0 1.0813995467886794 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 7.9351;7.1156 -;- 145 + 1 1.301 90308.1 1.0 13050 5782 18830 HBL1_DMSO_200M_050219_1,18834 HBL1_DMSO_200M_050219_1,18834,FGGVLILIHR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18835 90.269 40.0 950700.0 25 0 100410.0 + 27109 PFISKELNI 9 84 530.8060859879108 1059.5976190426215 2 530.8056518435478 MULTI CID FTMS 0 0 0 18830 481829.46875 0.3634840918012777 2 -0.2325057983398437 5 Unmodified _PFISKELNI_ ENSG00000166200|ENST00000388901|COPS2;nc|ENSG00000166200|P61201-2|COPS2 21.74664581756881 0.2544899275067181 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[{I|L}T]K{M(Oxidation (M))|F} 7 6 18.522 0.0 0.0 1.748 0.0 0.0 0.0 208.1529528651403 208.1529528651403 5.0270633542735546 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3494850021680094 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[{I|L}T]K{M(Oxidation (M))|F} 1.748 - 202 1 1.301 41431.8 1.0 13051 5782 18830 HBL1_DMSO_200M_050219_1,18835 HBL1_DMSO_200M_050219_1,18835,PFISKELNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18836 90.277 488.0 386530.0 25 0 39306.0 + 18403 KVVDVVRNLVF 11 147 644.392792354282 1286.771031775364 2 644.3923828005791 MULTI CID FTMS 0 0 0 18830 379123.5625 0.7922860615442466 -2 0.2171783447265625 6 Unmodified _KVVDVVRNLVF_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 80.89551112106177 0.0069906411478691 3 KVVDVRNV{I|L}V{M(Oxidation (M))|F} 11 2 + 86.494 0.0 0.0 6.7218 6.7218 86.379 0.0 0.0 0.0 21.671043487920656 9.298924794039124 9.298924794039124 5.735228231192394 0 3.159379381312206 1.0457574905606752 0.0 0.3252574989159953 KVVDVRNV{I|L}V{M(Oxidation (M))|F};KVVDVRQVVV{M(Oxidation (M))|F};KVVDVRGGV{I|L}V{M(Oxidation (M))|F};KVVDVRNV{I|L}{M(Oxidation (M))|F}V;KVVDV[VG]{I|L}RGV{M(Oxidation (M))|F};KVVDVR[AG]VVV{M(Oxidation (M))|F};KVVDVRQVV{M(Oxidation (M))|F}V;KVVDVRGGV{I|L}{M(Oxidation (M))|F}V;KVVDVR{I|L}[YK]AP;KVVDV[VG]{I|L}RG{M(Oxidation (M))|F}V 6.7218;6.2761;6.0124;5.9991;5.6293;5.5667;5.5534;5.2897;4.9917;4.9066 -;-;-;-;-;-;-;-;-;- 6503 + 1 1.301 146524.6 1.0 13052 5782 18830 HBL1_DMSO_200M_050219_1,18836 HBL1_DMSO_200M_050219_1,18836,KVVDVVRNLVF True True KVVDVVRNLVF 90.277195 644.392382800579 11071785.0 18830.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1 7.065437952677409 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18837 90.28 112.0 690600.0 25 0 84762.0 + 35412 STIRLLTSL 9 111 502.3119414277781 1002.609329922356 2 502.3127929568291 MULTI CID FTMS 0 0 0 18830 377995.9375 0.0345985814337623 -3 0.3569183349609375 7 Unmodified _STIRLLTSL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 80.6760300276096 0.0173529540220427 3 {[TV]|[{I|L}S]}TR{I|L}{I|L}TS{I|L} 9 2 + 80.46 0.0 0.0 8.0251 8.0251 82.161 0.0 0.0 0.0 0.5740919023555335 16.478174818886373 0.5740919023555335 0.5740919023555335 0 1.6237125054200234 1.2218487496163564 1.1861818737241734 0.0 {[TV]|[{I|L}S]}TR{I|L}{I|L}TS{I|L};{[MG]|[TS]}{I|L}R{I|L}{I|L}TS{I|L};[{I|L}T]SR{I|L}{I|L}TS{I|L};{I|L}{I|L}[KC]{I|L}{I|L}TS{I|L};{[TV]|[{I|L}S]}T[K{I|L}]{I|L}ES{I|L};{[MG]|[TS]}{I|L}[K{I|L}]{I|L}ES{I|L};[{I|L}T]S[K{I|L}]{I|L}ES{I|L};{[TV]|[{I|L}S]}T[K{I|L}]{I|L}TD{I|L};{[MG]|[TS]}{I|L}[K{I|L}]{I|L}TD{I|L};{I|L}{I|L}[KC]{I|L}{I|L}GM{I|L} 8.0251;7.9678;6.6977;5.2544;5.2058;5.1486;3.8784;3.683;3.6257;3.4765 -;+;-;-;-;-;-;-;-;- + 428 1 1.301 67305.8 1.0 13053 5782 18830 HBL1_DMSO_200M_050219_1,18837 HBL1_DMSO_200M_050219_1,18837,STIRLLTSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18838 90.284 225.0 517790.0 25 0 69905.0 + 11680 GLEQPLIQI 9 136 505.7980705194621 0 505.7983276247978 PEAK CID FTMS 0 0 0 18830 356969.6875 0.3004862376980631 -2 0.2171783447265625 8 Unmodified _GLEQPLIQI_ REV__ENSG00000117425|ENST00000372192|PTCH2;REV__nc|ENSG00000117425|Q9Y6C5-2|PTCH2 30.63653989081413 0.1077493867305487 3 {I|L}VV{I|L} 4 -1 20.477 0.0 0.0 2.0283 0.0 0.0 259.15508771685535 323.1001375787719 582.2552252956273 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {I|L}VV{I|L} 2.0283 - 252 + 1 1.301 90410.3 1.0 13054 5782 18830 HBL1_DMSO_200M_050219_1,18838 HBL1_DMSO_200M_050219_1,18838,GLEQPLIQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18839 90.296 692.0 318030.0 25 0 22393.0 + 39200 TYRLLRVL 8 201 345.2222822525596 1032.6450173578787 3 345.2217590212822 MULTI CID FTMS 0 0 0 18830 316430.65625 0.3777831610576008 2 -0.2325057983398437 9 Unmodified _TYRLLRVL_ ENST00000382247.5_1_4:17805583-17805688:-|nuORF 16.149105407346934 0.6723412507259107 3 {I|L}H{I|L}V{I|L}{I|L}R 7 6 50.469 0.0 0.0 4.8873 0.0 0.0 170.06549160059632 0.0 170.06549160059632 0.0 37.89485898245216 0.0 0.0 0 0.7521934810768762 0.0 0.0 0.5994850021680094 {I|L}H{I|L}V{I|L}{I|L}R 4.8873 - 354 + 1 1.301 179033.5 1.0 13055 5782 18830 HBL1_DMSO_200M_050219_1,18839 HBL1_DMSO_200M_050219_1,18839,TYRLLRVL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18840 90.306 555.0 413360.0 25 0 30665.0 + + -1 KVIDYVPGIFQE 12 153 704.3797924583661 1406.745031983532 2 704.3801147341728 MULTI CID FTMS 0 0 0 18830 308962.34375 0.4215125053718698 -2 0.2171783447265625 10 Oxidation (M) _WTARSRKVKM(Oxidation (M))E_ ENSG00000163659|ENST00000295924|TIPARP 22.65808497894818 0.560183898709508 3 {NN|[MP]|[D{I|L}]|[EV]}YVKVPG{I|L}{M(Oxidation (M))|F}QE 12 -1 + 81.465 0.0 0.0 5.7911 5.7911 75.156 0.0 0.0 0.0 4.251488288312601 4.251488288312601 4.251488288312601 0.1230450566754512 0 1.9564608101803795 1.0969100130080565 1.392159058960253 0.0 {NN|[MP]|[D{I|L}]|[EV]}YVKVPG{I|L}{M(Oxidation (M))|F}QE;{NN|[MP]|[D{I|L}]|[EV]}YVKVPAV{M(Oxidation (M))|F}QE;{NN|[MP]|[D{I|L}]|[EV]}VYKVPG{I|L}{M(Oxidation (M))|F}QE;{NN|[MP]|[D{I|L}]|[EV]}VYKVPAV{M(Oxidation (M))|F}QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}GPVKV{I|L}ME;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}VAPVKV{I|L}ME;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}GPVK[KS]QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}VAPVK[KS]QE;[AG]{M(Oxidation (M))|F}[KS]KVPG{I|L}{M(Oxidation (M))|F}QE;[AG]{M(Oxidation (M))|F}[KS]KVPAV{M(Oxidation (M))|F}QE 5.7911;5.7823;5.5082;5.4994;5.4888;5.4801;5.4612;5.4525;5.4471;5.4384 -;-;-;-;-;-;-;-;-;- 6425 1 1.301 168128.7 1.0 13056 5782 18830 HBL1_DMSO_200M_050219_1,18840 HBL1_DMSO_200M_050219_1,18840,WTARSRKVKME False False KVIDYVPGIFQE 90.305536 704.380114734173 16561223.0 18830.0 ENSG00000163659|ENST00000295924|TIPARP 9.177296161651611 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18841 90.309 164.0 393260.0 25 0 50880.0 + 30640 RFPDFVRDF 9 87 599.8038732626476 1197.593193592095 2 599.8042480349541 MULTI CID FTMS 0 0 0 18830 280679.28125 0.0794728978687969 5 -0.5483779907226562 11 Unmodified _RFPDFVRDF_ ENSG00000213339|ENST00000250237|QTRT1;ENST00000587500.5_1_19:10823370-10823943:+|nuORF 32.89776655970281 0.1144444835665315 3 [R{M(Oxidation (M))|F}][DP]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F} 9 0 + 43.879 0.0 0.0 3.6639 3.6639 68.428 0.0 0.0 0.0 0.1020323059250571 6.287657576926222 0.1020323059250571 0.1020323059250571 0 1.25 0.0 0.0 0.6307196863200843 + + [R{M(Oxidation (M))|F}][DP]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]{M(Oxidation (M))|F}[RP]DE;{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]{M(Oxidation (M))|F}[DP]RE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]{M(Oxidation (M))|F}V[VG]D{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[RH]{M(Oxidation (M))|F}[RP]DE;[Y{I|L}][MT][PG]VRD{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[RH]{M(Oxidation (M))|F}[DP]RE;{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}V[VG]D{M(Oxidation (M))|F} 3.6639;3.6554;3.1389;3.0579;2.9243;2.8865;2.5414;2.3853;2.3268;2.289 +;-;-;-;-;-;-;-;-;- + 237 1 1.301 52197.4 1.0 13057 5782 18830 HBL1_DMSO_200M_050219_1,18841 HBL1_DMSO_200M_050219_1,18841,RFPDFVRDF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18842 90.32 614.0 316170.0 25 0 33179.0 + 10214 FQITPDKIQF 10 167 618.8352756050914 1235.6559982769827 2 618.8348876833916 MULTI CID FTMS 0 0 0 18830 234367.28125 1.0 0 0.0 12 Unmodified _FQITPDKIQF_ ENSG00000141076|ENST00000314423|UTP4;ENST00000569800.5_1_16:69167425-69171817:+|nuORF;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 100.0907132914201 0.0086105052902417 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T[DP]K{I|L}Q{M(Oxidation (M))|F} 10 0 + 60.463 0.0 0.0 4.8932 4.8932 76.408 0.0 0.0 0.0 6.32023214705405 2.825382125373956 2.825382125373956 2.825382125373956 0 1.9489700043360187 0.8860566476931632 1.1549471895720984 1.110924374808178 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T[DP]K{I|L}Q{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T[NP]{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};AATP{I|L}T{I|L}Q{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};AATP{I|L}TQ{I|L}{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}TH[PA]TP[QP];[{I|L}P]DKT{I|L}Q{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};AATP{I|L}QT{I|L}{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QT{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}T{I|L}Q{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 4.8932;4.6645;4.5791;4.5614;4.4761;4.4035;4.3879;4.3832;4.3178;4.308 +;-;-;-;-;-;-;-;-;- + 10237 + 1 1.301 141888.3 1.0 13058 5782 18830 HBL1_DMSO_200M_050219_1,18842 HBL1_DMSO_200M_050219_1,18842,FQITPDKIQF True True FQITPDKIQF 90.319503 618.834887683392 2763230.75 18830.0 nc|ENSG00000141076|Q969X6-3|UTP4;;ENST00000569800.5_1_16:69167425-69171817:+|nuORF;;ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 5.861798127492269 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18843 90.326 290.0 245710.0 25 0 28414.0 27886 PLSLPELT 8 99 435.2525437444794 868.4905345557588 2 435.2523376345634 MULTI CID FTMS 0 0 0 18830 204181.0 0.5217480601717479 5 -0.5483779907226562 13 Unmodified _PLSLPELT_ ENSG00000082516|ENST00000285873|GEMIN5;REV__ENSG00000114473|ENST00000265239|IQCG;REV__ENST00000463651.1_1_3:197670645-197672498:-|nuORF;REV__ENST00000480302.5_1_3:197665562-197672498:-|nuORF 40.44857923139169 0.2267865117615937 3 [{I|L}P]S{I|L}[EP][{I|L}T] 8 0 + 24.554 0.0 0.0 2.8272 2.8272 77.305 0.0 0.0 0.0 2.999321256797181 2.1741655787624765 2.1741655787624765 8.57840941039746 0 0.3807196863200844 1.5228787452803376 0.6643943297944485 0.0 + + [{I|L}P]S{I|L}[EP][{I|L}T];[{I|L}P]S{I|L}[{I|L}T][EP];[TP]V{I|L}[EP][{I|L}T];[VP]T{I|L}[EP][{I|L}T];[{I|L}T][VP][EP][{I|L}T];[TP]V{I|L}[{I|L}T][EP] 2.8272;1.8395;1.3571;0.83868;0.66368;0.36931 +;-;-;-;-;- + 159 1 1.301 62014.3 1.0 13059 5782 18830 HBL1_DMSO_200M_050219_1,18843 HBL1_DMSO_200M_050219_1,18843,PLSLPELT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18844 90.34 800.0 299860.0 25 0 13657.0 + 41224 VPFPKNFMSV 10 231 583.3065600451735 1164.5985671571468 2 583.3072997927666 MULTI CID FTMS 0 0 0 18830 201464.234375 0.6847642539736761 1 -0.1559600830078125 14 Unmodified _VPFPKNFMSV_ ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B 63.960520009940105 0.0261970246776379 3 VP{M(Oxidation (M))|F}P[HT][RN]M 9 5 52.721 0.0 0.0 4.527 0.0 0.0 0.0 82.06693445377186 82.06693445377186 21.803601041680345 0.0 0.0 0.0 0 0.9436726795685342 1.154901959985743 0.5994850021680094 0.2887254899964357 VP{M(Oxidation (M))|F}P[HT][RN]M 4.527 - 10368 + 1 1.301 178552.3 0.949999988079071 13060 5782 18830 HBL1_DMSO_200M_050219_1,18844 HBL1_DMSO_200M_050219_1,18844,VPFPKNFMSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18845 90.354 800.0 182530.0 25 0 12658.0 + 30870 RIMPEDIIINC 11 163 658.8385216493598 1315.6624903655195 2 658.8392211794853 MULTI CID FTMS 0 0 0 18830 170340.796875 0.0906090540011397 5 -0.5483779907226562 15 Unmodified _RIMPEDIIINC_ ENSG00000198900|ENST00000361337|TOP1 29.43715596616401 0.4010092210691691 3 {[QN]|[E{I|L}]|[KN]}AV[DV]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]} 12 5 + 43.738 0.0 0.0 3.3244 3.3244 50.824 0.0 0.0 0.0 2.979848306981985 7.447274948966935 2.979848306981985 0.0 0 0.8494850021680094 1.0 0.3054621874040891 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}AV[DV]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{[QN]|[E{I|L}]|[KN]}AN[QA]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]};[{I|L}T][VS][EP]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{[QN]|[E{I|L}]|[KN]}AN[WQ]{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{[QN]|[E{I|L}]|[KN]}T[WP]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}A[DV]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{[QN]|[E{I|L}]|[KN]}VA[DV]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{[QV]|[N{I|L}]|[RA]|[KV]}[PA][KC]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{[QN]|[E{I|L}]|[KN]}AGG[QA]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}[EP]D{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]} 3.3244;3.3244;3.098;3.0507;3.0159;2.9487;2.8982;2.6888;2.6329;2.5586 -;-;-;-;-;-;-;-;-;- 871 1 1.301 115746.3 0.8999999761581421 13061 5782 18830 HBL1_DMSO_200M_050219_1,18845 HBL1_DMSO_200M_050219_1,18845,RIMPEDIIINC False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18846 90.367 800.0 476040.0 25 0 34906.0 -1 0 226 557.3019930013577 1668.8841496042728 3 557.3033935427666 MULTI CID FTMS 0 0 0 18830 176528.125 0.1506183755004703 -3 0.3569183349609375 16 3 V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K 16 -1 + 147.12 0.0 0.0 8.8157 8.8157 88.596 0.0 0.0 0.0 36.70941280735775 3.856355030044938 3.856355030044938 3.856355030044938 0 0.9247425010840048 2.0 1.2104093769761877 1.4551120522087029 V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DNK{I|L};V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;V{I|L}K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;V{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGGK{I|L};V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}D[KQ]V;V{I|L}K{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DNK{I|L};V{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DNK{I|L};V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}[RN]S{I|L} 8.8157;8.5846;8.2756;8.114;8.114;8.0445;7.992;7.883;7.883;7.6987 -;-;-;-;-;-;-;-;-;- 78821 + 1 1.301 278450.5 0.8999999761581421 13062 5782 18830 HBL1_DMSO_200M_050219_1,18846 HBL1_DMSO_200M_050219_1,18846, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18847 90.382 800.0 239360.0 25 0 19840.0 + 38887 TVLAIDAIHQL 11 182 597.348358881584 1192.682164829968 2 597.3491088747978 MULTI CID FTMS 0 0 0 18830 167044.453125 1.0 0 0.0 17 Unmodified _TVLAIDAIHQL_ ENSG00000211455|ENST00000389032|STK38L;nc|ENSG00000211455|Q9Y2H1-2|STK38L 87.25819977447905 0.0022587470437062 3 {[TV]|[{I|L}S]}{I|L}A{I|L}DA{I|L}HQ{I|L} 11 0 + 102.46 0.0 0.0 8.591 8.591 96.164 0.0 0.0 0.0 61.95871661762796 11.489375793422012 11.489375793422012 15.07062321345802 0 1.274227503252014 2.0 0.8494850021680094 1.3996498648046138 + + {[TV]|[{I|L}S]}{I|L}A{I|L}DA{I|L}HQ{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L}W{I|L}HQ{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L}VEAHQ{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L}DP[HK]S{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L}DP[HK]TV;{[TV]|[{I|L}S]}{I|L}A{I|L}DP[HK]{I|L}S;{[TV]|[{I|L}S]}{I|L}A{I|L}DA[YK]TV;{[TV]|[{I|L}S]}{I|L}A{I|L}DA[YK]S{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L}DA{I|L}HAG{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L}DA{I|L}HAAV 8.591;7.3274;7.0215;7.0031;7.0031;6.8827;6.7507;6.7507;6.6772;6.6772 +;-;-;-;-;-;-;-;-;- + 8548 + 1 1.301 142672.8 0.9200000166893004 13063 5782 18830 HBL1_DMSO_200M_050219_1,18847 HBL1_DMSO_200M_050219_1,18847,TVLAIDAIHQL True True TVLAIDAIHQL 90.3825 597.349108874798 1895478.0 18830.0 nc|ENSG00000211455|Q9Y2H1-2|STK38L;;ENSG00000211455|ENST00000389032|STK38L 5.974732557932536 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18848 90.396 800.0 172360.0 25 0 34820.0 -1 0 146 319.6661809789778 637.3178090247557 2 319.6656371951103 MULTI CID FTMS 0 0 0 18830 161036.3125 0.8785439644324483 1 -0.1559600830078125 18 3 VC(Carbamidomethyl (C)) 2 -1 10.943 0.0 0.0 1.7171 0.0 0.0 59.048004425929385 316.1565340631469 375.2045384890763 0.0 0.0 0.0 0.0 0 0.75 0.0 0.0 0.0 VC(Carbamidomethyl (C)) 1.7171 - 36 + 1 1.301 111921.9 0.5899999737739563 13064 5782 18830 HBL1_DMSO_200M_050219_1,18848 HBL1_DMSO_200M_050219_1,18848, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18849 90.41 800.0 141630.0 25 0 18782.0 + + -1 SWPTYPQLY 9 80 1154.5543524333962 1153.5470759667962 1 1155.166308581829 MULTI CID FTMS 0 0 0 18830 43536.08984375 0.6153888075075272 -1 0.0972747802734375 19 Carbamidomethyl (C),Oxidation (M) _IC(Carbamidomethyl (C))PTYIQIM(Oxidation (M))_ ENSG00000108010|ENST00000331244|GLRX3 39.957323273325 0.0756908302845263 3 C(Carbamidomethyl (C)){I|L}[TP]Y 5 -1 21.616 0.0 0.0 1.8739 0.0 0.0 0.0 516.2469014090442 516.2469014090442 9.502939426435171 0.0 0.0 0.0 0 1.0189301784845295 0.0 0.0 0.0 C(Carbamidomethyl (C)){I|L}[TP]Y 1.8739 - 244 + 1 1.301 81217.6 0.7400000095367432 13065 5782 18830 HBL1_DMSO_200M_050219_1,18849 HBL1_DMSO_200M_050219_1,18849,ICPTYIQIM False False SWPTYPQLY 90.410179 1155.16630858183 1057899.75 18830.0 ENSG00000108010|ENST00000331244|GLRX3 7.347014586130778 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18850 90.414 143.0 237390.0 25 0 28997.0 + 8902 FAFRYVTTI 9 71 559.305377078076 1116.596201222952 2 559.3062011599541 MULTI CID FTMS 0 0 0 18830 142429.515625 0.0177307782765047 11 -1.1982803344726562 20 Unmodified _FAFRYVTTI_ ENSG00000187325|ENST00000341864|TAF9B;ENSG00000273841|ENST00000217893|TAF9;ENST00000480681.1_1_X:77393446-77395117:-|nuORF;ENST00000587506.1_1_19:30528395-30528668:+|nuORF 41.8396318013385 0.0653578398400075 3 ET{I|L} 3 7 41.242 0.0 0.0 3.6936 0.0 0.0 755.4093495099625 0.0 755.4093495099625 0.0 30.64627746168897 0.0 0.0 0 0.8807196863200843 0.0 0.9247425010840048 0.0 ET{I|L} 3.6936 - 81 1 1.301 34915.2 1.0 13066 5782 18830 HBL1_DMSO_200M_050219_1,18850 HBL1_DMSO_200M_050219_1,18850,FAFRYVTTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18852 90.419 5.7 7510700.0 25 0 571710.0 + 35429 STLHLVLRL 9 57 351.2258024463099 1050.6555779391297 3 351.2257568240166 MULTI CID FTMS 0 0 0 18851 6094537.5 0.1513674998976732 3 -0.3425445556640625 1 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 24.020572477871973 0.2255576514309169 3 {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}] 9 0 + 41.761 0.0 0.0 3.9748 3.9748 74.122 0.0 0.0 0.0 10.066504924811625 5.642492736872597 5.642492736872597 3.0102999566398125 0 0.2887254899964357 0.0 0.0 0.0 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}];{[MG]|[TS]}{I|L}{I|L}HV{I|L}[R{I|L}];{[MG]|[TS]}{I|L}H{I|L}{I|L}V[R{I|L}];{[MG]|[TS]}{I|L}{I|L}H{I|L}V[R{I|L}] 3.9748;3.6883;3.5207;3.2341 +;-;-;- + 80 + 1 1.31 44468.9 1.0 13067 5783 18851 HBL1_DMSO_200M_050219_1,18852 HBL1_DMSO_200M_050219_1,18852,STLHLVLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18853 90.42 10.0 5641600.0 25 0 1119300.0 + 4946 DGLVVLKI 8 69 428.7789292609092 855.5433055886184 2 428.7788879275322 MULTI CID FTMS 0 0 0 18851 4768605.5 0.9891315136219074 1 -0.0765457153320312 2 Unmodified _DGLVVLKI_ ENSG00000147677|ENST00000521861|EIF3H;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 26.88365393820708 0.4786498634179528 3 [DG]{I|L}VV{I|L}K{I|L} 8 0 [DG]{I|L} + + 38.669 15.406 5.4031 4.5198 4.5198 54.077 0.0 0.0 0.0 0.0 23.262716691946068 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.2215141619232908 + + [DG]{I|L}VV{I|L}K{I|L} 4.5198 + + 91 + 1 1.31 48436.6 1.0 13068 5783 18851 HBL1_DMSO_200M_050219_1,18853 HBL1_DMSO_200M_050219_1,18853,DGLVVLKI False True DGLVVLKI 90.419744 428.778887927532 158703684.0 18851.0 ENSG00000147677|ENST00000521861|EIF3H;;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 2.3363298972447715 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18854 90.421 4.7 8164800.0 25 0 1424700.0 + 4437 DAWKELTIV 9 77 537.7962342907024 1073.577915648205 2 537.7955200076103 MULTI CID FTMS 0 0 0 18851 6906151.5 0.9589575585192888 -1 0.1559600830078125 3 Unmodified _DAWKELTIV_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 36.506200033944 0.094635877243972 3 {[DA]|[EG]}WKE{I|L}T{I|L}V 9 0 + 49.843 0.0 0.0 4.6427 4.6427 86.259 0.0 0.0 0.0 17.632192780232785 27.147642715192504 17.632192780232785 22.04628427264403 0 1.1989700043360187 1.3979400086720375 0.5 0.0 + + {[DA]|[EG]}WKE{I|L}T{I|L}V;[TP]{I|L}AAWCT{I|L}V;{[QN]|[E{I|L}]|[KN]}[KT][PA]CT{I|L}V;[{I|L}T]PAAWCT{I|L}V;[TP][RV]WCT{I|L}V;{[SA]|[TG]}R[WE]{I|L}T{I|L}V;[WK][WE]{I|L}T{I|L}V;{[SA]|[TG]}R{[DA]|[EG]}E{I|L}T{I|L}V;[WK]{[DA]|[EG]}E{I|L}T{I|L}V;{[QN]|[E{I|L}]|[KN]}[KT]WW{I|L}V 4.6427;2.5892;2.5628;2.4251;2.2611;2.0971;2.0545;2.0545;2.0068;1.9118 +;-;-;-;-;-;-;-;-;- + 328 1 1.31 37146.6 1.0 13069 5783 18851 HBL1_DMSO_200M_050219_1,18854 HBL1_DMSO_200M_050219_1,18854,DAWKELTIV True True DAWKELTIV 90.420921 537.79552000761 125479672.0 18851.0 ENST00000420783.7_1_3:49044839-49051550:+|nuORF;;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;;ENST00000489684.2_1_3:49044864-49050780:+|nuORF;;ENSG00000178252|ENST00000608424|WDR6 8.147647698720297 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18855 90.422 28.0 1397300.0 25 0 165960.0 + 33587 SIPDFPMHLA 10 61 564.2809876429643 1126.5474223527283 2 564.2813598513603 MULTI CID FTMS 0 0 0 18851 1458017.25 0.9361191322702064 2 -0.1835708618164062 4 Unmodified _SIPDFPMHLA_ ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1 20.453626601364224 0.5043500229302764 3 {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F} 5 5 42.461 0.0 0.0 3.7691 0.0 0.0 0.0 564.2630443406447 564.2630443406447 17.56621263074983 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F} 3.7691 + + 71 + 1 1.31 37156.4 1.0 13070 5783 18851 HBL1_DMSO_200M_050219_1,18855 HBL1_DMSO_200M_050219_1,18855,SIPDFPMHLA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18856 90.423 33.0 1986900.0 25 0 181790.0 + 12757 GVPELLQKI 9 98 498.8082980029684 995.6020430727368 2 498.8084594607353 MULTI CID FTMS 0 0 0 18851 1179194.25 0.5664626147923147 3 -0.3425445556640625 5 Unmodified _GVPELLQKI_ ENSG00000076513|ENST00000261739|ANKRD13A 36.12702656103203 0.0967173616627612 3 [VG]PE{I|L}{I|L}QK{I|L} 9 0 + 61.297 0.0 0.0 6.1567 6.1567 88.21 0.0 0.0 0.0 8.443350238481031 13.46787486224656 8.443350238481031 9.208187539523747 0 0.3252574989159953 2.0 0.0 0.3252574989159953 + + [VG]PE{I|L}{I|L}QK{I|L};[VG]PE{I|L}{I|L}[AG]K{I|L};[VG]{I|L}[EP]{I|L}QK{I|L};[VG]{I|L}[EP]{I|L}[AG]K{I|L} 6.1567;5.2319;5.135;4.2101 +;-;-;- + 200 + 1 1.31 54984.5 1.0 13071 5783 18851 HBL1_DMSO_200M_050219_1,18856 HBL1_DMSO_200M_050219_1,18856,GVPELLQKI True True GVPELLQKI 90.423279 498.808459460735 63728836.0 18851.0 ENSG00000076513|ENST00000261739|ANKRD13A 4.800291856129964 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18857 90.424 41.0 1201600.0 25 0 118530.0 + 2769 ATPEGIFLRV 10 69 551.8165899220273 1101.6186269108546 2 551.8168212771416 MULTI CID FTMS 0 0 0 18851 818311.25 0.6798205100806014 -1 0.1559600830078125 6 Unmodified _ATPEGIFLRV_ ENSG00000107862|ENST00000369983|GBF1;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1 23.78978130925829 0.4341852049148378 3 [TA]PEG{I|L}{M(Oxidation (M))|F}{I|L}[RV] 10 0 + 64.13 0.0 0.0 5.8214 5.8214 80.129 0.0 0.0 0.0 36.68243764792422 4.884381005764311 4.884381005764311 3.0102999566398125 0 0.3494850021680094 2.0 0.0 0.0 + + [TA]PEG{I|L}{M(Oxidation (M))|F}{I|L}[RV];[TA]PEVA{M(Oxidation (M))|F}{I|L}[RV];[TA]VPEA{M(Oxidation (M))|F}{I|L}[RV] 5.8214;5.5481;4.2033 +;-;- + 80 + 1 1.31 46745.0 1.0 13072 5783 18851 HBL1_DMSO_200M_050219_1,18857 HBL1_DMSO_200M_050219_1,18857,ATPEGIFLRV False True ATPEGIFLRV 90.42446 551.816821277142 9277005.0 18851.0 ENSG00000107862|ENST00000369983|GBF1;;nc|ENSG00000107862|Q92538-1|GBF1;;nc|ENSG00000107862|Q92538-3|GBF1;;nc|ENSG00000107862|Q92538-2|GBF1 6.7542298634847 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18858 90.426 90.0 645240.0 25 0 55304.0 11673 GLEDTESYDQW 11 84 671.7756936121982 1341.5368342911963 2 671.7759277224541 MULTI CID FTMS 0 0 0 18851 722743.875 0.8608394744844615 -1 0.1559600830078125 7 Unmodified _GLEDTESYDQW_ ENSG00000198879|ENST00000397167|SFMBT2 8.745405648335112 0.8338865417133445 3 [EP]GDWSE 7 9 39.525 0.0 0.0 2.9463 0.0 0.0 0.0 538.1980386471153 538.1980386471153 20.139691322137665 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.6549471895720984 0.0 [EP]GDWSE 2.9463 - 330 1 1.31 48694.1 1.0 13073 5783 18851 HBL1_DMSO_200M_050219_1,18858 HBL1_DMSO_200M_050219_1,18858,GLEDTESYDQW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18859 90.429 107.0 682400.0 25 0 166660.0 + 14107 IASVRELL 8 88 450.7792559749908 899.5439590167816 2 450.7794982790947 MULTI CID FTMS 0 0 0 18851 465476.8125 0.7632825778427134 -1 0.1559600830078125 8 Unmodified _IASVRELL_ REV__ENSG00000188986|ENST00000343053|NELFB;REV__nc|ENSG00000188986|Q8WX92|NELFB 38.15118350030904 0.2652218139009398 3 [{I|L}A]{[WT]|[RM]}A{I|L}{I|L}{I|L} 8 -1 + 56.872 0.0 0.0 6.3223 6.3223 80.921 0.0 0.0 0.0 9.1204482964487 16.40978057358332 9.1204482964487 2.552725051033065 0 0.9247425010840048 1.6989700043360187 0.6989700043360187 0.0 [{I|L}A]{[WT]|[RM]}A{I|L}{I|L}{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AA{I|L}{I|L}{I|L};[{I|L}A][MN]{I|L}{I|L}{I|L}{I|L};[{I|L}A][VS]{[RE]|[WV]}{I|L}{I|L};{I|L}{I|L}[WK]D{I|L}{I|L};{[TV]|[{I|L}S]}[RD]A{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}G{[RE]|[WV]}{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}G{I|L}{[RE]|[WV]}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[DG]{I|L}{I|L}{I|L};{I|L}{I|L}[MN]A{I|L}{I|L}{I|L} 6.3223;6.0385;5.7919;5.3495;5.3084;4.9689;4.8064;4.8064;4.8016;4.8016 -;-;-;+;-;-;-;-;-;- + 460 1 1.31 62031.3 1.0 13074 5783 18851 HBL1_DMSO_200M_050219_1,18859 HBL1_DMSO_200M_050219_1,18859,IASVRELL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18860 90.431 111.0 566680.0 25 0 58464.0 + 20805 LLVVYPWTQR 10 59 637.866693470314 1273.718834007428 2 637.8657714724541 MULTI CID FTMS 0 0 0 18851 421033.375 0.6794517734897845 -1 0.1559600830078125 9 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 41.95555342248728 0.1369168616057562 3 {I|L}{I|L}VVYP{NN|[MP]|[D{I|L}]|[EV]}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 11 5 + 65.974 0.0 0.0 5.1796 5.1796 88.687 0.0 0.0 0.0 43.12016064141415 2.7634918824923176 2.7634918824923176 35.01471284755077 0 1.424742501084005 1.6989700043360187 0.0 0.8494850021680094 {I|L}{I|L}VVYP{NN|[MP]|[D{I|L}]|[EV]}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{I|L}{I|L}V{[{M(Oxidation (M))|F}D]|MM}[TP]{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.1796;2.4306 -;- 195 + 1 1.31 51647.0 1.0 13075 5783 18851 HBL1_DMSO_200M_050219_1,18860 HBL1_DMSO_200M_050219_1,18860,LLVVYPWTQR False True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 18861 90.433 72.0 1785800.0 25 0 439850.0 + 41789 VPVPAVVSL 9 104 440.7789055530888 879.5432581729776 2 440.7788879275322 MULTI CID FTMS 0 0 0 18851 387487.96875 0.7324937709513015 -1 0.1559600830078125 10 Unmodified _VPVPAVVSL_ ENSG00000165684|ENST00000684778|SNAPC4 26.34127834903884 0.1960301806784604 3 {[QV]|[N{I|L}]|[RA]|[KV]}DVN{I|L} 6 6 38.862 0.0 0.0 4.4184 0.0 0.0 0.0 208.1696114442516 208.1696114442516 16.003253155312073 0.0 0.0 0.0 0 0.0 1.0 0.2742275032520141 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}DVN{I|L} 4.4184 - 1432 1 1.31 104925.8 1.0 13076 5783 18851 HBL1_DMSO_200M_050219_1,18861 HBL1_DMSO_200M_050219_1,18861,VPVPAVVSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18862 90.435 118.0 576810.0 25 0 100250.0 14062 IALYEHTI 8 98 480.2637016127318 958.5128502922636 2 480.2639037966728 MULTI CID FTMS 0 0 0 18851 371328.25 0.7622925852773044 -1 0.1559600830078125 11 Unmodified _IALYEHTI_ ENSG00000013503|ENST00000228347|POLR3B;nc|ENSG00000013503|Q9NW08-2|POLR3B 15.768221252438446 0.6779680726941459 3 [QP]E{M(Oxidation (M))|F}AA 6 7 25.406 0.0 0.0 2.6506 0.0 0.0 0.0 312.1942217124386 312.1942217124386 3.521825181113627 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [QP]E{M(Oxidation (M))|F}AA 2.6506 - 262 1 1.31 54780.1 1.0 13077 5783 18851 HBL1_DMSO_200M_050219_1,18862 HBL1_DMSO_200M_050219_1,18862,IALYEHTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18863 90.437 74.0 656130.0 25 0 76838.0 + 33883 SLFPGKLEVV 10 71 544.8211903903407 1087.6278278474813 2 544.8214599490166 MULTI CID FTMS 0 0 0 18851 388316.53125 0.5649758698792148 -4 0.51287841796875 12 Unmodified _SLFPGKLEVV_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 17.11289562659939 0.5604042439455784 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F} 3 7 28.557 0.0 0.0 2.6256 0.0 0.0 0.0 737.4206799805469 737.4206799805469 1.816271552006654 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[TV]|[{I|L}S]}{M(Oxidation (M))|F} 2.6256 + + 56 1 1.31 43826.2 1.0 13078 5783 18851 HBL1_DMSO_200M_050219_1,18863 HBL1_DMSO_200M_050219_1,18863,SLFPGKLEVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18864 90.447 556.0 508710.0 25 0 67234.0 + + 27405 SFVWHALDY 9 209 569.2686675483949 1136.5227821635897 2 569.2719604372978 MULTI CID FTMS 0 0 0 18851 344715.6875 0.418706456950475 -2 0.25323486328125 13 Unmodified _PILDDSSLDY_ ENSG00000153201|ENST00000283195|RANBP2 30.63653989081413 0.2803493085145199 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VWHA{I|L}DY 9 -1 + 65.263 0.0 0.0 5.7423 5.7423 84.24 0.0 0.0 0.0 6.668950068207451 13.470573594556342 6.668950068207451 6.668950068207451 0 1.5 2.0 0.3252574989159953 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VWHA{I|L}DY;[WH]VAEVYAY;[WH]VA{I|L}DYAY;[WH]VAEV{M(Oxidation (M))|F}SY;[WH]VA{M(Oxidation (M))|F}S{I|L}DY;[WH]VAYA{I|L}DY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VWHEVAY;[WH]VA{I|L}D{M(Oxidation (M))|F}SY;[WH]AVEVYAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VA{[MS]|[{M(Oxidation (M))|F}A]}VYAY 5.7423;5.1555;5.0006;4.9417;4.912;4.8907;4.8411;4.7867;4.7357;4.6258 -;-;-;-;-;-;-;-;-;- 5920 1 1.31 213898.9 1.0 13079 5783 18851 HBL1_DMSO_200M_050219_1,18864 HBL1_DMSO_200M_050219_1,18864,PILDDSSLDY False False SFVWHALDY 90.446754 569.271960437298 16256958.0 18851.0 ENSG00000153201|ENST00000283195|RANBP2 7.988272984822591 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18865 90.449 83.0 393710.0 25 0 28830.0 + 44248 YLKDFFSNV 9 77 566.7854162894092 1131.5562796456184 2 566.7870361208916 MULTI CID FTMS 0 0 0 18851 303036.90625 1.0 0 0.0 14 Unmodified _YLKDFFSNV_ ENSG00000107201|ENST00000379883|RIGI;nc|ENSG00000107201|O95786-2|RIGI 29.081581746732265 0.1611639662936252 3 [Y{I|L}][W{M(Oxidation (M))|F}][YK]NV 8 4 + 33.974 0.0 0.0 3.0024 3.0024 82.372 0.0 0.0 0.0 10.92277997287504 2.687872417789528 2.687872417789528 27.25772496747986 0 0.8494850021680094 2.0 0.0 0.3807196863200844 [Y{I|L}][W{M(Oxidation (M))|F}][YK]NV;[W{I|L}][Y{M(Oxidation (M))|F}][YK]NV 3.0024;0.59358 -;- 114 + 1 1.31 34790.6 1.0 13080 5783 18851 HBL1_DMSO_200M_050219_1,18865 HBL1_DMSO_200M_050219_1,18865,YLKDFFSNV False True YLKDFFSNV 90.448631 566.787036120892 4120285.25 18851.0 nc|ENSG00000107201|O95786-2|RIGI;;ENSG00000107201|ENST00000379883|RIGI 5.570076624552409 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18866 90.451 106.0 453460.0 25 0 56861.0 + -1 YYKKMLNAL 9 72 580.3108966406983 1158.6072403481965 2 580.3110229372978 MULTI CID FTMS 0 0 0 18851 282218.96875 0.007978383278557 20 -2.1575469970703125 15 Oxidation (M) _YYKKM(Oxidation (M))LNAL_ REV__ENSG00000158077|ENST00000299481|NLRP14 18.13498045792455 0.3457906370836843 3 YY{I|L}S 4 -1 56.186 0.0 0.0 4.8494 0.0 0.0 0.0 629.3452059737338 629.3452059737338 42.88486918618936 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YY{I|L}S 4.8494 - 63 + 1 1.31 45322.8 1.0 13081 5783 18851 HBL1_DMSO_200M_050219_1,18866 HBL1_DMSO_200M_050219_1,18866,YYKKMLNAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18867 90.453 119.0 472390.0 25 0 64376.0 + 15611 IQAESIPLI 9 99 492.2926499464516 982.5707469597032 2 492.2931396365166 MULTI CID FTMS 0 0 0 18851 294723.15625 1.0 0 0.0 16 Unmodified _IQAESIPLI_ ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1 36.12702656103203 0.0967173616627612 3 [{I|L}P]VNA{M(Oxidation (M))|F} 6 8 30.864 0.0 0.0 3.1411 0.0 0.0 0.0 338.20860682771803 338.20860682771803 10.686362358410122 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [{I|L}P]VNA{M(Oxidation (M))|F} 3.1411 - 351 1 1.31 47902.3 1.0 13082 5783 18851 HBL1_DMSO_200M_050219_1,18867 HBL1_DMSO_200M_050219_1,18867,IQAESIPLI True True IQAESIPLI 90.453352 492.293139636517 5298887.0 18851.0 nc|ENSG00000079785|Q92499-2|DDX1;;ENSG00000079785|ENST00000233084|DDX1 1.4138551354408264 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18868 90.465 678.0 250750.0 25 0 19114.0 + 28611 PVEFRRWTKRM 11 131 753.4099082233099 1504.8052635134195 2 753.4106933474541 MULTI CID FTMS 0 0 0 18851 212249.4375 1.0 0 0.0 17 Unmodified _PVEFRRWTKRM_ REV__ENSG00000204618|ENST00000244360|RNF39;REV__nc|ENSG00000204618|Q9H2S5-2|RNF39;REV__nc|ENSG00000204618|Q9H2S5|RNF39 11.494710602746466 0.7960433852372589 3 [VP]EYG{M(Oxidation (M))|F}QNA{I|L}{I|L}VR 13 -1 + 139.9 0.0 0.0 9.2967 9.2967 93.783 0.0 0.0 0.0 113.95896413234816 14.903374789542568 14.903374789542568 9.072459467631006 0 3.504432191740108 1.5228787452803376 0.0 1.9440611365856897 [VP]EYG{M(Oxidation (M))|F}QNA{I|L}{I|L}VR;[VP]EYG{M(Oxidation (M))|F}[AG]NA{I|L}{I|L}VR;[VP]EYG{M(Oxidation (M))|F}QGGA{I|L}{I|L}VR;[VP]EYG{M(Oxidation (M))|F}[AG]GGA{I|L}{I|L}VR;[VP]EYG{M(Oxidation (M))|F}QNA{I|L}[RV]{I|L};[VP]EYG{M(Oxidation (M))|F}[AG]NA{I|L}[RV]{I|L};[VP]EYG{M(Oxidation (M))|F}QGGA{I|L}[RV]{I|L};[VP][WY]{M(Oxidation (M))|F}QNA{I|L}{I|L}VR;[VP][WY]{M(Oxidation (M))|F}QGGA{I|L}{I|L}VR;[VP][WY]{M(Oxidation (M))|F}[AG]NA{I|L}{I|L}VR 9.2967;8.6938;8.6938;8.0924;7.8261;7.2232;7.2232;6.6096;6.0049;6.0049 -;-;-;-;-;-;-;-;-;- 3376 + 1 1.31 124080.0 1.0 13083 5783 18851 HBL1_DMSO_200M_050219_1,18868 HBL1_DMSO_200M_050219_1,18868,PVEFRRWTKRM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18869 90.469 208.0 384870.0 25 0 45591.0 + 34016 SLITPLQAV 9 126 471.2869254398679 940.5592979465358 2 471.2871276736259 MULTI CID FTMS 0 0 0 18851 208963.78125 0.4305144322337624 2 -0.1835708618164062 18 Unmodified _SLITPLQAV_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 39.957323273325 0.0756908302845263 3 {[TV]|[{I|L}S]}{I|L}TP 5 4 35.942 0.0 0.0 3.8214 0.0 0.0 0.0 426.2353593081171 426.2353593081171 16.690067809585756 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[TV]|[{I|L}S]}{I|L}TP 3.8214 + + 413 1 1.31 66983.2 1.0 13084 5783 18851 HBL1_DMSO_200M_050219_1,18869 HBL1_DMSO_200M_050219_1,18869,SLITPLQAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18870 90.477 436.0 250590.0 25 0 51071.0 + 24915 MPPEPIII 8 126 455.259313833082 908.504074732964 2 455.2596923708916 MULTI CID FTMS 0 0 0 18851 192372.96875 0.3951682024638317 9 -0.9118499755859376 19 Unmodified _MPPEPIII_ ENSG00000066117|ENST00000394963|SMARCD1;nc|ENSG00000066117|Q96GM5-2|SMARCD1 34.18733598223924 0.3315367612694167 3 [H{I|L}]WPM 5 7 34.705 0.0 0.0 3.82 0.0 0.0 0.0 241.154054030212 241.154054030212 16.746199743006045 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 [H{I|L}]WPM 3.82 - 281 1 1.31 88084.0 1.0 13085 5783 18851 HBL1_DMSO_200M_050219_1,18870 HBL1_DMSO_200M_050219_1,18870,MPPEPIII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18871 90.491 800.0 278680.0 25 0 66337.0 41557 VPPEAILL 8 165 426.2648951914162 850.5152374496324 2 426.2628967165947 MULTI CID FTMS 0 0 0 18851 182436.015625 0.3003328948169878 9 -0.9118499755859376 20 Unmodified _VPPEAILL_ ENSG00000182973|ENST00000328834|CNOT10;nc|ENSG00000182973|Q9H9A5-2|CNOT10;nc|ENSG00000182973|Q9H9A5-3|CNOT10;nc|ENSG00000182973|Q9H9A5-4|CNOT10;nc|ENSG00000182973|Q9H9A5-5|CNOT10;nc|ENSG00000182973|Q9H9A5-6|CNOT10 28.17323086031832 0.4514957916281387 3 {I|L}V{I|L}{I|L} 4 6 18.672 0.0 0.0 2.1954 0.0 0.0 394.1862049787125 0.0 394.1862049787125 0.0 4.69273760456403 0.0 0.0 0 0.5484550065040281 0.0 0.0 0.0 {I|L}V{I|L}{I|L} 2.1954 - 148 1 1.31 175697.1 0.800000011920929 13086 5783 18851 HBL1_DMSO_200M_050219_1,18871 HBL1_DMSO_200M_050219_1,18871,VPPEAILL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18873 90.495 5.9 10830000.0 25 0 846820.0 + 4185 DAPIVAHLW 9 74 511.27712008281816 1020.5396872324364 2 511.2771484255791 MULTI CID FTMS 0 0 0 18872 8772920.0 1.0 0 0.0 1 Unmodified _DAPIVAHLW_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 49.66892048692302 0.0410958345688192 3 {[DA]|[EG]}P{I|L}VAH{I|L}W 9 0 + 60.829 0.0 0.0 5.9605 5.9605 90.373 0.0 0.0 0.0 25.42342188037523 6.935749724493121 6.935749724493121 18.61555346200056 0 0.6549471895720984 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}P{I|L}VAH{I|L}W;[{I|L}P]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AV{I|L}[HQ];[{I|L}P][WE]V{I|L}[HQ];[{I|L}P]VWE{I|L}[HQ];WP{I|L}[R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}];[H{I|L}]G[KS][KS][HQ] 5.9605;4.1364;3.7966;3.7048;3.1881;0.98321 +;-;-;-;-;- + 276 + 1 1.31 59163.9 1.0 13087 5784 18872 HBL1_DMSO_200M_050219_1,18873 HBL1_DMSO_200M_050219_1,18873,DAPIVAHLW True True DAPIVAHLW 90.495108 511.277148425579 174798592.0 18872.0 nc|ENSG00000110090|P50416-2|CPT1A;;ENSG00000110090|ENST00000265641|CPT1A 7.150992552439372 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18874 90.496 16.0 3784900.0 25 0 298240.0 + 29724 QPLPVILHV 9 78 508.318790644387 1014.623028355574 2 508.3190795779228 MULTI CID FTMS 0 0 0 18872 2809831.5 0.1486386842412915 4 -0.43292236328125 2 Unmodified _QPLPVILHV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 20.871210003555333 0.2717241269066626 3 [QP]{I|L}PV{I|L}{I|L}VH 9 2 + 40.465 0.0 0.0 3.9881 3.9881 83.255 0.0 0.0 0.0 2.2845717176406666 9.037854146535942 2.2845717176406666 14.143304248602067 0 0.0 0.0 0.0 0.0 [QP]{I|L}PV{I|L}{I|L}VH;[QP]{I|L}PV{I|L}[HV]{I|L} 3.9881;2.5942 -;- 121 + 1 1.31 52353.7 1.0 13088 5784 18872 HBL1_DMSO_200M_050219_1,18874 HBL1_DMSO_200M_050219_1,18874,QPLPVILHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18875 90.497 21.0 3805100.0 25 0 302470.0 + 35438 STLHLVLRL 9 82 526.3348604530025 1050.655167972805 2 526.3350097537041 MULTI CID FTMS 0 0 0 18872 2358222.75 0.082440052026715 4 -0.43292236328125 3 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 69.10491478415734 0.0214449631113747 3 {[MG]|[TS]}{I|L}H{I|L}V{I|L}R{I|L} 9 0 + 63.879 0.0 0.0 6.0799 6.0799 77.182 0.0 0.0 0.0 0.7525749891599531 14.789784572998173 0.7525749891599531 0.7525749891599531 0 2.305462187404089 0.0 0.0 0.2742275032520141 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}R{I|L};{I|L}{[MG]|[TS]}H{I|L}V{I|L}R{I|L};[H{I|L}]TS{I|L}V{I|L}R{I|L};{[MG]|[TS]}{I|L}H{I|L}{I|L}VR{I|L};{I|L}{[MG]|[TS]}H{I|L}{I|L}VR{I|L};{[MG]|[TS]}{I|L}{I|L}HV{I|L}R{I|L};{I|L}{[MG]|[TS]}{I|L}HV{I|L}R{I|L};{[MG]|[TS]}{I|L}{I|L}H{I|L}VR{I|L};{I|L}{[MG]|[TS]}{I|L}H{I|L}VR{I|L};[H{I|L}]{I|L}{[MG]|[TS]}V{I|L}R{I|L} 6.0799;6.0083;5.9354;5.55;5.4783;5.3175;5.2459;4.7875;4.7159;3.73 +;-;-;-;-;-;-;-;-;- + 225 + 1 1.31 67684.1 1.0 13089 5784 18872 HBL1_DMSO_200M_050219_1,18875 HBL1_DMSO_200M_050219_1,18875,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18876 90.499 27.0 1951000.0 25 0 505680.0 + 4040 DALSKMVII 9 76 495.2900240193716 988.5654951055432 2 495.7926208376884 MULTI CID FTMS 0 0 0 18872 1494350.75 0.7445251446818618 1 -0.107025146484375 4 Unmodified _DALSKMVII_ ENSG00000100104|ENST00000215917|SRRD 29.081581746732265 0.1611639662936252 3 {I|L}{I|L}P[C(Carbamidomethyl (C))M]{I|L}{I|L} 7 5 26.726 0.0 0.0 2.7035 0.0 0.0 130.0838189354244 0.0 130.0838189354244 0.0 10.097819940404587 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {I|L}{I|L}P[C(Carbamidomethyl (C))M]{I|L}{I|L} 2.7035 - 193 + 1 1.31 48796.4 1.0 13090 5784 18872 HBL1_DMSO_200M_050219_1,18876 HBL1_DMSO_200M_050219_1,18876,DALSKMVII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18877 90.5 31.0 850950.0 25 0 300110.0 43423 WRMKRKTILWK 11 41 515.9782255317241 1544.9128471953725 3 515.9783203005791 MULTI CID FTMS 0 0 0 18872 1484597.0 0.6052215651079238 2 -0.2659988403320312 5 Unmodified _WRMKRKTILWK_ ENST00000346991.9_1_15:40939257-40942558:+|nuORF 0.0 0.8751479354844584 3 {I|L} 1 10 11.594 0.0 0.0 0.75045 0.0 0.0 1413.8178897752534 0.0 1413.8178897752534 0.0 11.10924374808178 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.75045 + + 5 + 1 1.31 30499.1 1.0 13091 5784 18872 HBL1_DMSO_200M_050219_1,18877 HBL1_DMSO_200M_050219_1,18877,WRMKRKTILWK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18878 90.501 28.0 2120000.0 25 0 311770.0 + 10216 FQIVNPHLL 9 79 540.8137926044848 1079.6130322757697 2 540.8139526247978 MULTI CID FTMS 0 0 0 18872 1472976.125 0.4880896976280047 -2 0.2325057983398437 6 Unmodified _FQIVNPHLL_ ENSG00000167325|ENST00000300738|RRM1 34.10243960390752 0.1078313939113124 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VNP{I|L}H{I|L} 9 2 + 49.646 0.0 0.0 4.5985 4.5985 75.985 0.0 0.0 0.0 17.24987323830529 5.572972332329407 5.572972332329407 3.0102999566398125 0 0.9247425010840048 1.0 0.0 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VNP{I|L}H{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VNPH{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VGGP{I|L}H{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VGGPH{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[TA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L};[H{I|L}][WR]V{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.5985;4.3196;3.7456;3.4667;1.9614;1.473 -;+;-;-;-;- + 231 + 1 1.31 49755.7 1.0 13092 5784 18872 HBL1_DMSO_200M_050219_1,18878 HBL1_DMSO_200M_050219_1,18878,FQIVNPHLL True True FQIVNPHLL 90.501001 540.813952624798 67525912.0 18872.0 ENSG00000167325|ENST00000300738|RRM1 6.643015702565511 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18879 90.502 41.0 1521400.0 25 0 196400.0 + 2412 AQQELKLLL 9 99 528.3265052661409 1054.6384575990817 2 528.3267700076103 MULTI CID FTMS 0 0 0 18872 1462403.75 0.57515550131149 -1 0.0765457153320312 7 Unmodified _AQQELKLLL_ ENSG00000119041|ENST00000263956|GTF3C3 67.83816525789305 0.0219346420158844 3 [QA]QE{I|L}K{I|L}{I|L}{I|L} 9 0 + 65.945 0.0 0.0 6.2529 6.2529 76.861 0.0 0.0 0.0 6.77440017027358 6.77440017027358 6.77440017027358 0.2680249241196719 0 2.309894379144197 0.7958800173440752 0.3807196863200844 0.4247425010840047 + + [QA]QE{I|L}K{I|L}{I|L}{I|L};[QA]GAE{I|L}K{I|L}{I|L}{I|L};[QA][AG]E{I|L}K{I|L}{I|L}{I|L};QQAE{I|L}K{I|L}{I|L}{I|L};{I|L}{I|L}KEQ{I|L}{I|L}[QA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}K{I|L}{I|L}{I|L}[QA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[QA]K{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QA]{I|L}K{I|L}{I|L}{I|L};{I|L}{I|L}KEQ[QA]{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}K{I|L}[QA]{I|L}{I|L} 6.2529;6.2275;4.7374;4.0897;3.1106;3.1064;2.8868;2.8556;2.8263;2.8221 +;-;-;-;-;-;-;-;-;- + 597 1 1.31 53396.9 1.0 13093 5784 18872 HBL1_DMSO_200M_050219_1,18879 HBL1_DMSO_200M_050219_1,18879,AQQELKLLL True True AQQELKLLL 90.502181 528.3272 59054460.0 18872.0 ENSG00000119041|ENST00000263956|GTF3C3 5.133595943450928 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18880 90.503 46.0 1470600.0 25 0 160640.0 + 6563 EALRLFQV 8 80 488.2845902080732 974.5546274829464 2 488.2845947146416 MULTI CID FTMS 0 0 0 18872 1297286.625 1.0 0 0.0 8 Unmodified _EALRLFQV_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 78.14939416004806 0.0999748067387998 3 {[CP]|[EA]}[R{I|L}]{I|L}{M(Oxidation (M))|F}QV 8 0 + 45.377 0.0 0.0 4.6562 4.6562 83.847 0.0 0.0 0.0 19.79364375124896 25.82416436005636 19.79364375124896 9.262137858390815 0 1.0189301784845295 0.0 2.2614393726401687 0.0 + + {[CP]|[EA]}[R{I|L}]{I|L}{M(Oxidation (M))|F}QV;{[CP]|[EA]}[R{I|L}]{I|L}{M(Oxidation (M))|F}[AG]V;{[CP]|[EA]}[R{I|L}]{I|L}T{[CA]|SS}V;{[QV]|[N{I|L}]|[RA]|[KV]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}]EV 4.6562;3.7058;2.7157;1.224 +;-;-;- + 106 1 1.31 55298.0 1.0 13094 5784 18872 HBL1_DMSO_200M_050219_1,18880 HBL1_DMSO_200M_050219_1,18880,EALRLFQV True True EALRLFQV 90.503422 488.284594714642 11360458.0 18872.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 4.980739116668701 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18881 90.505 60.0 1246200.0 25 0 202130.0 21297 LPELRRHL 8 72 517.3185843076021 1032.6226156820042 2 518.3221313357353 MULTI CID FTMS 0 0 0 18872 936324.5625 0.5802790028858253 7 -0.7034378051757812 9 Unmodified _LPELRRHL_ ENSG00000175213|ENST00000311764|ZNF408 10.183394434864962 0.7604730176254005 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P 3 7 30.19 0.0 0.0 2.9236 0.0 0.0 0.0 688.4258132740541 688.4258132740541 9.29892479403911 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P 2.9236 - 47 1 1.31 70512.9 1.0 13095 5784 18872 HBL1_DMSO_200M_050219_1,18881 HBL1_DMSO_200M_050219_1,18881,LPELRRHL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18882 90.507 72.0 648120.0 25 0 145740.0 + 40596 VKWRRREQLL 10 67 461.9489857904729 1382.8251279716187 3 461.9483825564384 MULTI CID FTMS 0 0 0 18872 686379.6875 0.7343139587302594 1 -0.107025146484375 10 Unmodified _VKWRRREQLL_ REV__ENSG00000099139|ENST00000674117|PCSK5 0.4583401331227399 0.7245164002484112 3 {I|L} 1 -1 11.42 0.0 0.0 0.82584 0.0 0.0 1251.729972187242 0.0 1251.729972187242 0.0 1.1423966425768484 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.82584 + + 14 + 1 1.31 48949.3 1.0 13096 5784 18872 HBL1_DMSO_200M_050219_1,18882 HBL1_DMSO_200M_050219_1,18882,VKWRRREQLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18883 90.509 95.0 716460.0 25 0 99789.0 + 21387 LPFVIPFVI 9 112 522.8265783272199 1043.6386037212396 2 522.8264037966728 MULTI CID FTMS 0 0 0 18872 503888.625 1.0 0 0.0 11 Unmodified _LPFVIPFVI_ REV__ENSG00000155886|ENST00000341998|SLC24A2;REV__nc|ENSG00000155886|Q9UI40-2|SLC24A2 56.04830969593885 0.0282699710924866 3 [{I|L}P]{M(Oxidation (M))|F}KNTV{I|L}{I|L} 9 -1 + 63.585 0.0 0.0 6.0926 6.0926 79.58 0.0 0.0 0.0 11.149794682072098 26.07795711453392 11.149794682072098 2.161903266879719 0 0.8494850021680094 2.0 0.75 0.0 [{I|L}P]{M(Oxidation (M))|F}KNTV{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}KNT{I|L}V{I|L};[{I|L}P]{M(Oxidation (M))|F}KGGTV{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}KGGT{I|L}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KNTV{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KNT{I|L}V{I|L};[{I|L}P]{M(Oxidation (M))|F}VV{M(Oxidation (M))|F}P{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KGGTV{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KGGT{I|L}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VV{M(Oxidation (M))|F}P{I|L}{I|L} 6.0926;5.8855;5.2103;5.0031;4.7482;4.541;4.2183;3.8659;3.6587;3.5736 -;-;-;-;-;-;-;-;-;- 634 1 1.31 60669.9 1.0 13097 5784 18872 HBL1_DMSO_200M_050219_1,18883 HBL1_DMSO_200M_050219_1,18883,LPFVIPFVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18884 90.519 609.0 459290.0 25 0 16996.0 -1 0 146 943.9720991859338 1885.929645438668 2 943.9720947146416 MULTI CID FTMS 0 0 0 18872 301071.71875 0.7723383241717499 -4 0.4496841430664062 12 3 [{I|L}T]T{I|L}PND[YC(Carbamidomethyl (C))]RT{I|L}{I|L}N 14 -1 71.468 0.0 0.0 3.7895 0.0 0.0 0.0 208.0731447809204 208.0731447809204 31.765092444914487 0.0 0.0 0.0 0 0.6435078169319297 2.0 0.6747425010840047 1.6549471895720984 [{I|L}T]T{I|L}PND[YC(Carbamidomethyl (C))]RT{I|L}{I|L}N 3.7895 - 14327 + 1 1.31 180905.4 1.0 13098 5784 18872 HBL1_DMSO_200M_050219_1,18884 HBL1_DMSO_200M_050219_1,18884, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18885 90.522 157.0 506140.0 25 0 102270.0 + 21413 LPGPILQSI 9 98 469.289747928835 936.56494292447 2 469.2895690798759 MULTI CID FTMS 0 0 0 18872 288940.75 1.0 0 0.0 13 Unmodified _LPGPILQSI_ ENSG00000132128|ENST00000617190|LRRC41;ENST00000469150.1_1_1:46763228-46764055:-|nuORF;nc|ENSG00000132128|Q15345-3|LRRC41 49.66892048692302 0.0410958345688192 3 [{I|L}P]GP{I|L}{I|L}QS{I|L} 9 0 + 48.605 0.0 0.0 5.1898 5.1898 80.438 0.0 0.0 0.0 12.405492482825991 10.330145895351848 10.330145895351848 4.771212547196626 0 0.8182503180159344 1.3979400086720375 0.0 0.0 + + [{I|L}P]GP{I|L}{I|L}QS{I|L};[{I|L}P]GP{I|L}Q{I|L}S{I|L};[{I|L}P]GP{I|L}{I|L}[AG]S{I|L};[VP]AP{I|L}{I|L}QS{I|L};[{I|L}P]GP{I|L}[AG]{I|L}S{I|L};[PG]P{I|L}{I|L}{I|L}QS{I|L};[VP]AP{I|L}Q{I|L}S{I|L};[PG]{I|L}P{I|L}{I|L}QS{I|L};[PG]P{I|L}{I|L}Q{I|L}S{I|L};[VP]AP{I|L}{I|L}[AG]S{I|L} 5.1898;4.6803;4.2066;3.8652;3.6971;3.591;3.3557;3.3315;3.0816;2.882 +;-;-;-;-;-;-;-;-;- + 295 1 1.31 64123.2 1.0 13099 5784 18872 HBL1_DMSO_200M_050219_1,18885 HBL1_DMSO_200M_050219_1,18885,LPGPILQSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18886 90.534 672.0 136410.0 25 0 47645.0 + 31663 RRGRRRWHPLR 11 98 773.4643479606364 1544.9141429880726 2 773.4637328982353 MULTI CID FTMS 0 0 0 18872 240164.921875 0.5551488904682752 3 -0.3158721923828125 14 Unmodified _RRGRRRWHPLR_ REV__ENST00000250894.8_2_16:1818305-1818896:+|nuORF 0.0 0.8751479354844584 3 {I|L} 1 -1 10.0 0.0 0.0 0.64729 0.0 0.0 1413.8192008267429 0.0 1413.8192008267429 0.0 6.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.64729 + + 47 + 1 1.31 79404.4 1.0 13100 5784 18872 HBL1_DMSO_200M_050219_1,18886 HBL1_DMSO_200M_050219_1,18886,RRGRRRWHPLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18887 90.548 800.0 453470.0 25 0 136930.0 + 31034 RLGYGAPA 8 176 402.72073205966433 803.4269111861287 2 402.7211181521416 MULTI CID FTMS 0 0 0 18872 234474.90625 1.0 0 0.0 15 Unmodified _RLGYGAPA_ REV__ENST00000367999.8_1_1:161136243-161136698:+|nuORF 10.183394434864962 0.7604730176254005 3 R{I|L} 2 -1 25.242 0.0 0.0 3.1418 0.0 0.0 0.0 531.2208130761612 531.2208130761612 14.404819596051324 0.0 0.0 0.0 0 0.8252574989159953 0.6020599913279624 0.0 0.0 R{I|L} 3.1418 + + 58 + 1 1.31 282489.6 0.8999999761581421 13101 5784 18872 HBL1_DMSO_200M_050219_1,18887 HBL1_DMSO_200M_050219_1,18887,RLGYGAPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18888 90.554 336.0 509610.0 25 0 69221.0 + 45798 YYLTHGLYL 9 147 571.8000100132143 1141.5854670932283 2 571.8000976443291 MULTI CID FTMS 0 0 0 18872 224528.1875 0.8720553015616861 -1 0.0765457153320312 16 Unmodified _YYLTHGLYL_ ENSG00000101464|ENST00000217446|PIGU;nc|ENSG00000101464|Q9H490-2|PIGU 67.34385681178166 0.0221257235307089 3 [{I|L}T]HG{I|L}YYY{I|L} 9 4 + 55.905 0.0 0.0 4.8971 4.8971 73.483 0.0 0.0 0.0 3.754924108031332 3.754924108031332 3.754924108031332 0.8978030532459513 0 0.3807196863200844 1.3979400086720375 1.3838031200885157 0.0 [{I|L}T]HG{I|L}YYY{I|L};[{I|L}T]HGYY{I|L}Y{I|L};[{I|L}T]HGY{I|L}YY{I|L};YY{I|L}C(Carbamidomethyl (C))[KS]VP{I|L};[{I|L}T]{I|L}DEY{I|L}Y{I|L};YY{I|L}THHVP{I|L};[{I|L}T]{I|L}DE{I|L}YY{I|L};YY{I|L}[VP][DP]Y{I|L};[{I|L}T]HYGY{I|L}Y{I|L};YY{I|L}C(Carbamidomethyl (C))[KS]{I|L}PV 4.8971;4.8185;4.6681;4.5682;4.1314;4.0408;3.981;3.9687;3.9023;3.8512 -;-;-;-;-;-;-;-;-;- 2943 1 1.31 131610.3 1.0 13102 5784 18872 HBL1_DMSO_200M_050219_1,18888 HBL1_DMSO_200M_050219_1,18888,YYLTHGLYL True True YYLTHGLYL 90.554086 571.800097644329 1659892.375 18872.0 ENSG00000101464|ENST00000217446|PIGU;;nc|ENSG00000101464|Q9H490-2|PIGU 4.060238440831502 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18889 90.567 719.0 422380.0 25 0 16314.0 + 28295 PRPWHWHWRRR 11 174 835.4490931096985 1668.883633286197 2 835.4499999880791 MULTI CID FTMS 0 0 0 18872 200372.625 1.0 0 0.0 17 Unmodified _PRPWHWHWRRR_ REV__ENST00000321582.9_1_9:124855435-124855555:-|nuORF 0.0833504608790944 0.8747546825782322 3 V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K 16 -1 + 196.03 0.0 0.0 11.746 11.746 94.285 0.0 0.0 0.0 36.70941280735778 11.813285372954 11.813285372954 9.013902021140469 0 5.05902924611682 2.0 1.424742501084005 1.3441876774005248 V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;V{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DNK{I|L};V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}{I|L}[DN]K;V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}D[KQ]V;V{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGGK{I|L};V{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DNK{I|L};V{I|L}GA{M(Oxidation (M))|F}SDG{I|L}AH{I|L}[RN]TV 11.746;11.206;11.045;11.038;10.679;10.627;10.504;10.498;10.337;10.095 -;-;-;-;-;-;-;-;-;- 622068 + 1 1.31 203714.2 1.0 13103 5784 18872 HBL1_DMSO_200M_050219_1,18889 HBL1_DMSO_200M_050219_1,18889,PRPWHWHWRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18890 90.57 77.0 576850.0 25 0 55533.0 + 17366 KMAEMLVEL 9 71 532.2798600894384 1062.5451672456768 2 532.2796508669853 MULTI CID FTMS 0 0 0 18872 194830.6875 0.1941389703486477 -3 0.3297805786132812 18 Unmodified _KMAEMLVEL_ ENSG00000178988|ENST00000320848|MRFAP1L1;ENSG00000179010|ENST00000382581|MRFAP1 19.361941925380144 0.3125782356748823 3 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L} 9 3 + 71.565 0.0 0.0 6.7352 6.7352 93.663 0.0 0.0 0.0 19.366130211356065 61.107150328368576 19.366130211356065 31.365006360318688 0 0.7742275032520141 1.5228787452803376 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L};[QA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}K[W{M(Oxidation (M))|F}]VE{I|L};{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))N][KT]VE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[ES]|[DT]|[{I|L}C]}M{I|L}VE{I|L};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}[W{M(Oxidation (M))|F}]VE{I|L};[{I|L}V][C(Carbamidomethyl (C))S]M{I|L}VE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QC]|[C(Carbamidomethyl (C))A]}[KT]VE{I|L};[{I|L}V]{[SA]|[TG]}[W{M(Oxidation (M))|F}]VE{I|L} 6.7352;3.7833;3.7775;3.7725;3.7294;3.4892;3.3086;2.5313;1.8272 -;-;-;-;-;-;-;-;- 120 1 1.31 42428.1 1.0 13104 5784 18872 HBL1_DMSO_200M_050219_1,18890 HBL1_DMSO_200M_050219_1,18890,KMAEMLVEL False True KMAEMLVEL 90.569837 532.279650866985 18399286.0 18872.0 ENSG00000179010|ENST00000382581|MRFAP1;;ENSG00000178988|ENST00000320848|MRFAP1L1 3.934242566426595 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18891 90.584 800.0 215990.0 25 0 64747.0 -1 0 105 976.5823086054796 0 976.7789184451104 PEAK CID FTMS 0 0 0 -1 0 19 3 V{M(Oxidation (M))|F}{I|L}[{I|L}A]{I|L}T 7 -1 27.95 0.0 0.0 1.4325 0.0 0.0 993.5947797092028 197.0937899225219 1190.6885696317247 0.0 0.0 0.0 0.0 0 0.0 0.0 1.9489700043360187 0.0 V{M(Oxidation (M))|F}{I|L}[{I|L}A]{I|L}T 1.4325 - 1478 + 1 1.31 115928.8 0.8799999952316284 13105 5784 18872 HBL1_DMSO_200M_050219_1,18891 HBL1_DMSO_200M_050219_1,18891, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18892 90.598 800.0 56038.0 25 0 3801.1 -1 0 67 1164.5395707415664 3490.5968828249 3 1165.202807605267 MULTI CID FTMS 0 0 0 18872 164647.40625 0.1323624108144968 -10 1.1127700805664062 20 3 VQY{M(Oxidation (M))|F}WQAGAE 10 -1 44.334 0.0 0.0 1.2701 0.0 0.0 1859.899081960012 448.1580294244751 2308.0571113844867 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VQY{M(Oxidation (M))|F}WQAGAE 1.2701 - 1250 + 1 1.31 36999.6 0.75 13106 5784 18872 HBL1_DMSO_200M_050219_1,18892 HBL1_DMSO_200M_050219_1,18892, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18894 90.602 5.7 4901400.0 25 0 464820.0 + 35413 STIRLLTSL 9 56 502.3119414277781 1002.609329922356 2 502.3114196658134 MULTI CID FTMS 0 0 0 18893 10925186.0 1.0 0 0.0 1 Unmodified _STIRLLTSL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 57.24910588100465 0.0276051374632116 3 {[MG]|[TS]}{I|L}R{I|L}{I|L}TS{I|L} 9 0 + 61.661 0.0 0.0 6.15 6.15 92.599 0.0 0.0 0.0 4.232712163289278 46.17599686953518 4.232712163289278 61.66054693457546 0 1.5044321917401078 0.0 0.7742275032520141 0.0 + + {[MG]|[TS]}{I|L}R{I|L}{I|L}TS{I|L} 6.15 + + 86 1 1.337 30511.8 1.0 13107 5785 18893 HBL1_DMSO_200M_050219_1,18894 HBL1_DMSO_200M_050219_1,18894,STIRLLTSL True True STIRLLTSL 90.602136 502.311419665813 221946976.0 18893.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 5.3004434903462725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18895 90.603 15.0 1142200.0 25 0 105880.0 + 26520 GKPSDALILG 10 43 485.78227411203727 969.5499952908746 2 485.7825500369072 MULTI CID FTMS 0 0 0 18893 2300165.0 0.019077944167541 5 -0.5302886962890625 2 Unmodified _NVIDNLIVA_ ENSG00000099810|ENST00000644715|MTAP;nc|ENSG00000099810|Q13126-6|MTAP;nc|ENSG00000099810|Q13126-3|MTAP;nc|ENSG00000099810|Q13126-7|MTAP;nc|ENSG00000099810|Q13126-4|MTAP;nc|ENSG00000099810|Q13126-2|MTAP;nc|ENSG00000099810|Q13126-5|MTAP 6.723162845929126 0.6799819581413107 3 {I|L} 1 8 6.9897 0.0 0.0 0.72092 0.0 0.0 514.3117273238809 339.1315096490844 853.4432369729652 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.72092 + + 7 + 1 1.337 19763.7 1.0 13108 5785 18893 HBL1_DMSO_200M_050219_1,18895 HBL1_DMSO_200M_050219_1,18895,NVIDNLIVA False False GKPSDALILG 90.603315 485.782550036907 1057650112.0 18893.0 ENSG00000099810|ENST00000644715|MTAP;;nc|ENSG00000099810|Q13126-6|MTAP;;nc|ENSG00000099810|Q13126-3|MTAP;;nc|ENSG00000099810|Q13126-7|MTAP;;nc|ENSG00000099810|Q13126-4|MTAP;;nc|ENSG00000099810|Q13126-2|MTAP;;nc|ENSG00000099810|Q13126-5|MTAP -0.4259588917096455 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18896 90.605 84.0 1056300.0 25 0 176280.0 + 21784 LPNDVVLQI 9 93 505.7980705194621 0 505.7979308962822 PEAK CID FTMS 0 0 0 18893 717149.3125 0.603674503261226 1 -0.1589736938476562 3 Unmodified _LPNDVVLQI_ ENSG00000135597|ENST00000450536|REPS1;nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1 65.23502041540118 0.0134875362242201 3 {I|L}VVDQ{I|L} 6 4 36.49 0.0 0.0 3.6143 0.0 0.0 259.15572612914053 80.01490961246327 339.1706357416038 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.0 0.6307196863200843 {I|L}VVDQ{I|L} 3.6143 - 174 + 1 1.337 71564.9 1.0 13109 5785 18893 HBL1_DMSO_200M_050219_1,18896 HBL1_DMSO_200M_050219_1,18896,LPNDVVLQI True True LPNDVVLQI 90.605199 505.797930896282 23048572.0 18893.0 nc|ENSG00000135597|Q96D71-3|REPS1;;nc|ENSG00000135597|Q96D71-2|REPS1;;ENSG00000135597|ENST00000450536|REPS1;;nc|ENSG00000135597|Q96D71-4|REPS1 2.2432158390680947 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18897 90.607 80.0 1009100.0 25 0 101850.0 + 34940 SQITSLVTL 9 109 481.2819446808776 960.5493364285552 2 481.2825805544853 MULTI CID FTMS 0 0 0 18893 724241.375 0.1019547280422903 -3 0.3395309448242187 4 Unmodified _SQITSLVTL_ ENSG00000164815|ENST00000297431|ORC5;ENST00000477223.1_1_7:103767297-103805736:-|nuORF 53.832793166522166 0.0319663582346103 3 [{I|L}T]NTS{I|L} 6 6 32.942 0.0 0.0 3.4295 0.0 0.0 0.0 328.1879222041991 328.1879222041991 5.651864780745541 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.610924374808178 0.0 [{I|L}T]NTS{I|L} 3.4295 - 905 1 1.337 69141.2 1.0 13110 5785 18893 HBL1_DMSO_200M_050219_1,18897 HBL1_DMSO_200M_050219_1,18897,SQITSLVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18898 90.611 188.0 845580.0 25 0 101800.0 + 32125 RVPDFILEKI 10 81 615.3666481148396 1228.718743296479 2 615.3667480349541 MULTI CID FTMS 0 0 0 18893 581461.9375 0.5086397326558024 -2 0.1835708618164062 5 Unmodified _RVPDFILEKI_ ENSG00000198826|ENST00000361627|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A 59.012897905743536 0.0391755228671419 3 [RV][DP]{M(Oxidation (M))|F}{I|L}{I|L}EK{I|L} 10 0 + 71.74 0.0 0.0 5.8386 5.8386 82.129 0.0 0.0 0.0 4.363912156954939 9.32589995347265 4.363912156954939 4.363912156954939 0 2.024227503252014 0.958607314841775 0.0 0.3494850021680094 + + [RV][DP]{M(Oxidation (M))|F}{I|L}{I|L}EK{I|L};{[TV]|[{I|L}S]}G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};{I|L}R{M(Oxidation (M))|F}{I|L}[TP]{I|L}EK{I|L};[RV][DP]{I|L}{M(Oxidation (M))|F}{I|L}EK{I|L};{I|L}R{M(Oxidation (M))|F}{I|L}[TP]{I|L}E{I|L}K;[RV][DP]{I|L}{M(Oxidation (M))|F}{I|L}E{I|L}K;{[TV]|[{I|L}S]}G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}TR{I|L};{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}[EP]EK{I|L};{[QN]|[E{I|L}]|[KN]}[QP]{M(Oxidation (M))|F}{I|L}{I|L}EK{I|L} 5.8386;5.4834;5.3199;5.1356;5.0796;4.9976;4.9416;4.8927;4.8091;4.6748 +;-;-;-;-;-;-;-;-;- + 698 1 1.337 122593.2 1.0 13111 5785 18893 HBL1_DMSO_200M_050219_1,18898 HBL1_DMSO_200M_050219_1,18898,RVPDFILEKI True True RVPDFILEKI 90.610649 615.366748034954 21292451.5 18893.0 nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A;;nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A;;ENSG00000198826|ENST00000361627|ARHGAP11A 6.833824475606282 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18899 90.612 38.0 1346500.0 25 0 116360.0 + + 10380 RVIGPFYEI 9 72 547.764568647829 1093.514584362458 2 547.7650024294853 MULTI CID FTMS 0 0 0 18893 523313.9375 0.8225353233400756 1 -0.1589736938476562 6 Unmodified _FSRNASDLGQ_ nc|ENSG00000107897|Q5T8D3-4|ACBD5;nc|ENSG00000107897|Q5T8D3-2|ACBD5;nc|ENSG00000107897|Q5T8D3|ACBD5;ENSG00000107897|ENST00000396271|ACBD5;ENST00000476758.1_1_10:27509331-27520733:-|nuORF 9.38312468134398 0.6832340498775793 3 {I|L} 1 -1 13.979 0.0 0.0 1.2784 0.0 0.0 962.4196116835502 0.0 962.4196116835502 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2784 + + 56 + 1 1.337 46303.2 1.0 13112 5785 18893 HBL1_DMSO_200M_050219_1,18899 HBL1_DMSO_200M_050219_1,18899,FSRNASDLGQ False False RVIGPFYEI 90.611828 547.3057 18346822.0 18893.0 nc|ENSG00000107897|Q5T8D3-4|ACBD5;;nc|ENSG00000107897|Q5T8D3-2|ACBD5;;nc|ENSG00000107897|Q5T8D3|ACBD5;;ENSG00000107897|ENST00000396271|ACBD5;;ENST00000476758.1_1_10:27509331-27520733:-|nuORF 5.940751552581787 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18900 90.614 123.0 680470.0 25 0 53427.0 + 38723 TTYEGIFKTL 10 103 586.8136899320438 1171.6128269308874 2 586.8136474490166 MULTI CID FTMS 0 0 0 18893 397656.6875 0.235273259837684 -2 0.1835708618164062 7 Unmodified _TTYEGIFKTL_ ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000432006.1_1_7:16625648-16626215:-|nuORF;ENST00000561539.1_1_16:28836974-28837213:+|nuORF;ENST00000562867.5_1_16:28834808-28837752:+|nuORF;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ENST00000566080.1_1_16:28837054-28837213:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 51.41523569358685 0.0718446036348414 3 {[DS]|[MA]|[CV]|TT}YEG{I|L}{M(Oxidation (M))|F}KT{I|L} 10 0 + 56.38 0.0 0.0 4.8122 4.8122 80.895 0.0 0.0 0.0 9.27948461635836 14.960762528683702 9.27948461635836 6.53212513775344 0 0.4247425010840047 0.0 0.9559771852360796 0.0 + + {[DS]|[MA]|[CV]|TT}YEG{I|L}{M(Oxidation (M))|F}KT{I|L};{[DS]|[MA]|[CV]|TT}YW{I|L}{M(Oxidation (M))|F}KT{I|L};{[DS]|[MA]|[CV]|TT}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WKT{I|L};{[DS]|[MA]|[CV]|TT}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KWT{I|L};{[DS]|[MA]|[CV]|TT}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TKW{I|L};{[DS]|[MA]|[CV]|TT}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{[NV]|[RG]}T{I|L};{[DS]|[MA]|[CV]|TT}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DS]|[MA]|[CV]|TT}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KTW{I|L};{[DS]|[MA]|[CV]|TT}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{[DS]|[MA]|[CV]|TT}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.8122;4.2547;2.5269;1.7561;1.6816;1.4841;1.3622;1.1678;1.0632;1.0225 +;-;-;-;-;-;-;-;-;- + 602 + 1 1.337 65857.5 1.0 13113 5785 18893 HBL1_DMSO_200M_050219_1,18900 HBL1_DMSO_200M_050219_1,18900,TTYEGIFKTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18901 90.618 204.0 433490.0 25 0 38148.0 + -1 WLSRMVLPFSR 11 86 704.3797924583661 1406.745031983532 2 704.3802368044853 MULTI CID FTMS 0 0 0 18893 384492.5 0.5245571191770636 1 -0.1589736938476562 8 Oxidation (M) _WLSRM(Oxidation (M))VLPFSR_ REV__ENST00000489226.5_1_9:130492547-130493681:+|nuORF 13.614867670302877 0.751941774060705 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}[PG]VKV{I|L}ME 12 -1 + 59.331 0.0 0.0 4.2176 4.2176 70.056 0.0 0.0 0.0 7.428577892622748 7.428577892622748 7.428577892622748 0.2114406948358294 0 1.7302046884880935 0.0 0.9456290139465234 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}[PG]VKV{I|L}ME;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}[PG]VK[KS]QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}[PG]VK{I|L}VME;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}V[PA]VKV{I|L}ME;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}V[PA]VK[KS]QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}V[PA]VK{I|L}VME;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[PA]{M(Oxidation (M))|F}VKV{I|L}ME;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[PA]{M(Oxidation (M))|F}VK[KS]QE;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}VKV[PG]{I|L}{M(Oxidation (M))|F}QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[PA]{M(Oxidation (M))|F}VK{I|L}VME 4.2176;4.2026;4.0725;4.0036;3.9886;3.8585;3.7493;3.7342;3.6896;3.6042 -;-;-;-;-;-;-;-;-;- 530 + 1 1.337 68863.9 1.0 13114 5785 18893 HBL1_DMSO_200M_050219_1,18901 HBL1_DMSO_200M_050219_1,18901,WLSRMVLPFSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18902 90.63 655.0 496270.0 25 0 27628.0 + 43236 WAYPRQVFI 9 225 590.3195556561316 1178.624558379063 2 590.3193237185478 MULTI CID FTMS 0 0 0 18893 320825.8125 0.5061742212310617 -2 0.1835708618164062 9 Unmodified _WAYPRQVFI_ ENSG00000005700|ENST00000306270|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;ENST00000505222.5_1_6:82901346-82950269:-|nuORF;nc|ENSG00000005700|Q9P2D0-2|IBTK 92.65332237495696 0.0139087009896299 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPRQV{M(Oxidation (M))|F}{I|L} 9 0 + 80.6 0.0 0.0 6.8385 6.8385 90.379 0.0 0.0 0.0 21.222412206649462 54.863263264386006 21.222412206649462 9.208187539523747 0 1.9291746928241125 1.6989700043360187 0.0 1.6906140654642812 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPRQV{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPR[AG]V{M(Oxidation (M))|F}{I|L};[{I|L}T]{[DS]|[MA]|[CV]|TT}QVASV{M(Oxidation (M))|F}{I|L};[RP]YQVAW{M(Oxidation (M))|F}{I|L};WA{I|L}A[KS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L};[RP]{[QV]|[N{I|L}]|[RA]|[KV]}YASV{M(Oxidation (M))|F}{I|L};WA{I|L}A[WR]TY{I|L};[RP]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}SSV{M(Oxidation (M))|F}{I|L};[RP]YARASV{M(Oxidation (M))|F}{I|L};[RP]YAGVAW{M(Oxidation (M))|F}{I|L} 6.8385;6.0572;4.2156;4.1277;4.0873;4.0071;3.9974;3.955;3.866;3.7984 +;-;-;-;-;-;-;-;-;- + 8502 1 1.337 235628.7 1.0 13115 5785 18893 HBL1_DMSO_200M_050219_1,18902 HBL1_DMSO_200M_050219_1,18902,WAYPRQVFI True True WAYPRQVFI 90.629674 590.319323718548 5856813.5 18893.0 nc|ENSG00000005700|Q9P2D0-2|IBTK;;ENSG00000005700|ENST00000306270|IBTK;;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;;ENST00000505222.5_1_6:82901346-82950269:-|nuORF 7.145432313283284 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18903 90.642 684.0 353410.0 25 0 26984.0 -1 HLFMTYLML 9 204 592.7931609421447 1183.571768951089 2 592.7938720583916 MULTI CID FTMS 0 0 0 18893 293835.15625 0.4308107267540049 -2 0.1835708618164062 10 Oxidation (M) _HLFMTYLM(Oxidation (M))L_ ENST00000342607.10_1_12:122213795-122213957:+|nuORF 30.22481116460888 0.1466181017706357 3 {[QN]|[E{I|L}]|[KN]}AR{I|L}ESTCY 10 -1 + 44.191 0.0 0.0 3.7337 3.7337 77.143 0.0 0.0 0.0 8.762626749157988 15.747782837136969 8.762626749157988 6.020599913279625 0 0.3812033112643843 1.3979400086720375 1.8494850021680087 0.0 {[QN]|[E{I|L}]|[KN]}AR{I|L}ESTCY;{[QN]|[E{I|L}]|[KN]}AR{I|L}TDTCY;{[QN]|[E{I|L}]|[KN]}AR{I|L}SETCY;{[QN]|[E{I|L}]|[KN]}AR{I|L}ESG{M(Oxidation (M))|F}Y;{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ESTCY;{[CP]|[EA]}{I|L}R{I|L}ESG{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AR{I|L}{M(Oxidation (M))|F}CT[MT];{[QN]|[E{I|L}]|[KN]}AR{I|L}TDG{M(Oxidation (M))|F}Y;{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}TDTCY;{[CP]|[EA]}{I|L}R{I|L}{M(Oxidation (M))|F}CT[MT] 3.7337;3.225;3.0762;2.975;2.8621;2.8121;2.4841;2.4664;2.3534;2.3212 -;-;-;-;-;-;-;-;-;- 1361 1 1.337 176226.5 1.0 13116 5785 18893 HBL1_DMSO_200M_050219_1,18903 HBL1_DMSO_200M_050219_1,18903,HLFMTYLML False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18904 90.651 526.0 487090.0 25 0 48797.0 + 45039 YPWGVVQV 8 178 474.25284917439313 946.4911454155864 2 474.2529479861259 MULTI CID FTMS 0 0 0 18893 173096.296875 0.6415535374282896 -2 0.1835708618164062 11 Unmodified _YPWGVVQV_ ENSG00000138758|ENST00000264893|SEPTIN11;ENSG00000164402|ENST00000378719|SEPTIN8;ENSG00000186522|ENST00000397712|SEPTIN10;ENST00000468616.5_1_2:110303765-110325397:-|nuORF;ENST00000483047.5_1_2:110321941-110325397:-|nuORF;ENST00000506047.1_1_4:77936059-77941836:+|nuORF;ENST00000517342.1_1_8:57389817-57390279:-|nuORF;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;nc|ENSG00000164402|Q92599-2|SEPTIN8;nc|ENSG00000164402|Q92599-3|SEPTIN8;nc|ENSG00000164402|Q92599-4|SEPTIN8;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;nc|ENSG00000186522|Q9P0V9-3|SEPTIN10 48.847882008758354 0.1446664477986014 3 [WP]GVYVQV 8 2 + 46.921 0.0 0.0 4.9574 4.9574 77.153 0.0 0.0 0.0 13.401685679627208 9.419628234359578 9.419628234359578 3.0102999566398125 0 0.5317183090963749 1.3979400086720375 0.0 0.0 [WP]GVYVQV;[WP]GVVYQV;[WP]GYVVQV;[WP]YGVVQV;{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}GVVQV;{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}RVQV;[WP]RKSHH;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WGVVQV;[WP]KRSHH;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[NV]|[RG]}EVQV 4.9574;4.6393;4.3213;4.0032;3.5414;3.4931;3.399;3.1811;3.081;2.9224 -;-;-;-;-;-;-;+;-;- + 869 1 1.337 195556.9 1.0 13117 5785 18893 HBL1_DMSO_200M_050219_1,18904 HBL1_DMSO_200M_050219_1,18904,YPWGVVQV False True YPWGVVQV 90.650826 474.252947986126 4250907.5 18893.0 ENST00000483047.5_1_2:110321941-110325397:-|nuORF;;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;;ENSG00000138758|ENST00000264893|SEPTIN11;;nc|ENSG00000164402|Q92599-2|SEPTIN8;;ENST00000517342.1_1_8:57389817-57390279:-|nuORF;;nc|ENSG00000164402|Q92599-4|SEPTIN8;;ENSG00000186522|ENST00000397712|SEPTIN10;;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;;ENST00000468616.5_1_2:110303765-110325397:-|nuORF;;ENSG00000164402|ENST00000378719|SEPTIN8;;nc|ENSG00000186522|Q9P0V9-3|SEPTIN10;;ENST00000506047.1_1_4:77936059-77941836:+|nuORF;;nc|ENSG00000164402|Q92599-3|SEPTIN8 4.490858713785808 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18905 90.659 476.0 580870.0 25 0 61518.0 + 17191 KLLDIRSYL 9 165 560.8408216817885 1119.667090430377 2 560.8407470583916 MULTI CID FTMS 0 0 0 18893 164454.3125 0.2473025769000901 -1 0.107025146484375 12 Unmodified _KLLDIRSYL_ ENSG00000103035|ENST00000219313|PSMD7 71.70789743142352 0.0204387454931768 3 K{I|L}{I|L}D{I|L}RYS{I|L} 9 2 + 81.547 0.0 0.0 7.2831 7.2831 81.997 0.0 0.0 0.0 3.648481219398093 1.491662398603154 1.491662398603154 1.491662398603154 0 2.3494850021680094 1.0 1.110924374808178 0.0 K{I|L}{I|L}D{I|L}RYS{I|L};K{I|L}{I|L}D{I|L}RYTV;{I|L}K{I|L}D{I|L}RYS{I|L};{I|L}K{I|L}D{I|L}RYTV;[K{I|L}]{I|L}D{[YD]|[{M(Oxidation (M))|F}M]}{I|L}K{I|L};{I|L}{I|L}KD{[YD]|[{M(Oxidation (M))|F}M]}{I|L}K{I|L};{I|L}{I|L}DK{[YD]|[{M(Oxidation (M))|F}M]}{I|L}K{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{[YD]|[{M(Oxidation (M))|F}M]}{I|L}K{I|L};{[TV]|[{I|L}S]}[R{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}K{I|L} 7.2831;7.1499;6.9573;6.8241;4.761;3.2704;2.3977;2.3481;1.9337 -;-;-;-;-;-;-;-;- 857 + 1 1.337 207844.5 1.0 13118 5785 18893 HBL1_DMSO_200M_050219_1,18905 HBL1_DMSO_200M_050219_1,18905,KLLDIRSYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18906 90.673 800.0 180660.0 25 0 14794.0 + 18404 KVVDVVRNLVF 11 163 644.392792354282 1286.771031775364 2 644.3932372927666 MULTI CID FTMS 0 0 0 18893 153187.59375 0.3201288638704104 1 -0.1589736938476562 13 Unmodified _KVVDVVRNLVF_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 68.75988807550267 0.0359983986270074 3 KVVDVRM[K{I|L}]S{I|L} 11 5 + 85.556 0.0 0.0 6.6489 6.6489 81.743 0.0 0.0 0.0 28.12479279163536 3.424226808222059 3.424226808222059 2.4190854354532405 0 1.8441876774005248 1.154901959985743 0.6109243748081782 0.3494850021680094 KVVDVRM[K{I|L}]S{I|L};KVVDVVGM[K{I|L}]S{I|L};KVVDVRM[K{I|L}]TV;KVVDVVGM[K{I|L}]TV;KVVDVVKRMT{I|L};KVVDVVKR[TP]{M(Oxidation (M))|F};KVVDVR[YK]{I|L}AP;KVVDVR[YK][PA]{I|L};KVVDV[HA]PKVPV;KVVDV[HA]PKVVP 6.6489;6.4609;6.3828;6.1948;5.652;5.3523;5.2601;5.2464;4.8899;4.8605 -;-;-;-;-;-;-;-;-;- 2424 + 1 1.337 111193.7 0.8899999856948853 13119 5785 18893 HBL1_DMSO_200M_050219_1,18906 HBL1_DMSO_200M_050219_1,18906,KVVDVVRNLVF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18907 90.68 314.0 207380.0 25 0 12418.0 + 41225 VPFPKNFMSV 10 108 583.3065600451735 1164.5985671571468 2 583.3078491091728 MULTI CID FTMS 0 0 0 18893 151546.3125 0.5150963789848819 4 -0.4233779907226562 14 Unmodified _VPFPKNFMSV_ ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B 38.17557092003332 0.1768326257063233 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VHH{M(Oxidation (M))|F}PVW 9 7 + 48.299 0.0 0.0 4.1472 4.1472 72.199 0.0 0.0 0.0 1.5321251377534395 5.899028321079953 1.5321251377534395 1.5321251377534395 0 0.9247425010840048 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VHH{M(Oxidation (M))|F}PVW;[VP]{M(Oxidation (M))|F}HH{M(Oxidation (M))|F}PVW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VHH{I|L}MVW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VHH{I|L}VMW;[VP]{M(Oxidation (M))|F}HH{I|L}MVW;[VP]{M(Oxidation (M))|F}HH{I|L}VMW;[VP]{M(Oxidation (M))|F}[HT]N[HK]SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VHHS[KQ]W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KP]N{M(Oxidation (M))|F}MVW;[VP]{M(Oxidation (M))|F}HHS[KQ]W 4.1472;4.0157;3.996;3.8888;3.8645;3.7572;3.6407;3.2054;3.1778;3.0738 -;-;-;-;-;-;-;-;-;- 942 1 1.337 56687.7 1.0 13120 5785 18893 HBL1_DMSO_200M_050219_1,18907 HBL1_DMSO_200M_050219_1,18907,VPFPKNFMSV False True VPFPKNFMSV 90.680294 583.307849109173 8637537.0 18893.0 ENSG00000173542|ENST00000309395|MOB1B;;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;;nc|ENSG00000173542|Q7L9L4-2|MOB1B;;ENSG00000114978|ENST00000396049|MOB1A 7.640494187672933 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18908 90.694 800.0 310330.0 25 0 52331.0 -1 0 142 1052.5186730649607 3154.534189795082 3 1052.852587878704 MULTI CID FTMS 0 0 0 18893 132530.5625 0.2417979828664059 -3 0.3395309448242187 15 3 [MN]MVN 5 -1 43.015 0.0 0.0 1.3636 0.0 0.0 0.0 2562.232275218419 2562.232275218419 0.7067355098630799 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [MN]MVN 1.3636 - 21505 + 1 1.337 154498.7 0.7099999785423279 13121 5785 18893 HBL1_DMSO_200M_050219_1,18908 HBL1_DMSO_200M_050219_1,18908, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18909 90.708 800.0 318380.0 25 0 37747.0 + + 29334 RALGLAISL 9 184 457.2941973344549 912.5738417357098 2 457.2947875857353 MULTI CID FTMS 0 0 0 18893 128428.28125 0.4586080436474432 -2 0.1835708618164062 16 Unmodified _QIRLAISL_ ENSG00000183751|ENST00000568546|TBL3 39.957323273325 0.2350051964751539 3 EP[KG]A{I|L}S{I|L} 8 -1 46.452 0.0 0.0 5.0902 0.0 0.0 99.10546309638828 0.0 99.10546309638828 0.0 19.573741578575003 0.0 0.0 0 0.7302046884880938 0.0 1.274227503252014 0.3807196863200844 EP[KG]A{I|L}S{I|L} 5.0902 - 420 1 1.337 196413.5 0.550000011920929 13122 5785 18893 HBL1_DMSO_200M_050219_1,18909 HBL1_DMSO_200M_050219_1,18909,QIRLAISL False False RALGLAISL 90.707978 457.294787585735 2364071.25 18893.0 ENSG00000183751|ENST00000568546|TBL3 2.931543509165446 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18910 90.714 257.0 316430.0 25 0 58616.0 + 2647 ATCKKMASMTI 11 111 395.5316324752305 1183.5730680258914 3 395.5316650271416 MULTI CID FTMS 0 0 0 18893 120193.984375 0.4682434313257799 -2 0.1835708618164062 17 Unmodified _ATCKKMASMTI_ ENSG00000120800|ENST00000261637|UTP20 8.155526934196011 0.8366696279279818 3 S{M(Oxidation (M))|F}{I|L}R 4 9 20.918 0.0 0.0 1.7673 0.0 0.0 385.1349709573352 292.13047205142817 677.2654430087633 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 S{M(Oxidation (M))|F}{I|L}R 1.7673 - 244 + 1 1.337 70110.2 1.0 13123 5785 18893 HBL1_DMSO_200M_050219_1,18910 HBL1_DMSO_200M_050219_1,18910,ATCKKMASMTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18911 90.728 800.0 247840.0 25 0 26483.0 + 32127 RVPDFILEKI 10 133 410.5801325430607 1228.718568229382 3 410.9138671755791 MULTI CID FTMS 0 0 0 18893 118591.0390625 1.0 0 0.0 18 Unmodified _RVPDFILEKI_ ENSG00000198826|ENST00000361627|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A 43.9818466556824 0.1155196613165264 3 [RV][DP]{M(Oxidation (M))|F}{I|L}{I|L}E{I|L}K 10 2 [RV][DP]{M(Oxidation (M))|F} + + 41.076 17.803 2.898 3.343 3.343 50.888 0.0 0.0 0.0 0.0 21.690840781556204 0.0 0.0 0 1.0 0.0 0.7302046884880937 0.3252574989159953 [RV][DP]{M(Oxidation (M))|F}{I|L}{I|L}E{I|L}K 3.343 - 265 + 1 1.337 157735.4 0.5 13124 5785 18893 HBL1_DMSO_200M_050219_1,18911 HBL1_DMSO_200M_050219_1,18911,RVPDFILEKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18912 90.742 800.0 490450.0 25 0 27048.0 -1 0 193 868.073736619802 2601.199380459606 3 868.4064819216728 MULTI CID FTMS 0 0 0 18893 114468.203125 0.1474792126996192 -3 0.3395309448242187 19 3 [YQ]{I|L}ENYG{[{M(Oxidation (M))|F}D]|MM}E{I|L}{I|L}YAVE{I|L} 17 -1 83.644 0.0 0.0 3.2156 0.0 0.0 0.0 538.2466186127627 538.2466186127627 10.920242464064458 0.0 0.0 0.0 0 1.8935078169319297 1.0969100130080565 0.0 2.6560383909227108 [YQ]{I|L}ENYG{[{M(Oxidation (M))|F}D]|MM}E{I|L}{I|L}YAVE{I|L} 3.2156 - 43471 1 1.337 258048.2 0.6800000071525574 13125 5785 18893 HBL1_DMSO_200M_050219_1,18912 HBL1_DMSO_200M_050219_1,18912, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18913 90.757 800.0 335100.0 25 0 51469.0 + -1 AYEFMSQAF 9 135 1092.5271588897317 2183.039764846264 2 1093.028124988079 MULTI CID FTMS 0 0 0 18893 117485.3671875 0.648617345653192 -3 0.3395309448242187 20 ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENSG00000069329|ENST00000299138|VPS35 3 {[QS]|[NT]}AAPPPPP 9 -1 57.601 0.0 0.0 2.6386 0.0 0.0 0.0 1337.5866950999412 1337.5866950999412 -11.842211296041832 0.0 -11.842211296041832 0.0 0 0.5 0.0 0.5189301784845296 0.8818108876706969 {[QS]|[NT]}AAPPPPP 2.6386 - 23261 1 1.337 168536.7 0.6499999761581421 13126 5785 18893 HBL1_DMSO_200M_050219_1,18913 HBL1_DMSO_200M_050219_1,18913, False False AYEFMSQAF 90.756621 1092.5271 1407196.375 18893.0 ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 6.412378629048665 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18915 90.761 21.0 1615400.0 25 0 319660.0 + 4438 DAWKELTIV 9 70 537.7962342907024 1073.577915648205 2 537.7955200076103 MULTI CID FTMS 0 0 0 18914 1424021.25 0.1977332731811032 2 -0.1669235229492187 1 Unmodified _DAWKELTIV_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 32.78568957990786 0.1150597335874693 3 [WK][WE]{I|L}T[{I|L}V] 8 3 + 23.645 0.0 0.0 2.2025 2.2025 66.525 0.0 0.0 0.0 0.4575749056067479 2.9453125937239832 0.4575749056067479 0.5115252244738109 0 0.5 0.0 0.5 0.0 [WK][WE]{I|L}T[{I|L}V];{[SA]|[TG]}R[WE]{I|L}T[{I|L}V];{[DA]|[EG]}W[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{I|L}V];[R{M(Oxidation (M))|F}]{I|L}WAA[TP]{I|L};[R{M(Oxidation (M))|F}]W{I|L}AA[TP]{I|L} 2.2025;2.1548;2.021;0.80437;0.44974 -;-;-;-;- 89 1 1.347 31079.2 1.0 13127 5786 18914 HBL1_DMSO_200M_050219_1,18915 HBL1_DMSO_200M_050219_1,18915,DAWKELTIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18916 90.762 36.0 1691700.0 25 0 131500.0 + 35430 STLHLVLRL 9 82 351.2258024463099 1050.6555779391297 3 351.2255737185478 MULTI CID FTMS 0 0 0 18914 1377991.375 0.0342246001955533 6 -0.569305419921875 2 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 37.97399986684836 0.0865783450051559 3 {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}] 9 0 + 47.756 0.0 0.0 4.5454 4.5454 75.827 0.0 0.0 0.0 15.716948499452656 11.637342758552691 11.637342758552691 3.0102999566398125 0 0.2887254899964357 0.0 0.0 0.5994850021680094 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}];{[MG]|[TS]}{I|L}{I|L}HV{I|L}[R{I|L}];{[MG]|[TS]}{I|L}H{I|L}{I|L}V[R{I|L}];{[MG]|[TS]}{I|L}{I|L}H{I|L}V[R{I|L}] 4.5454;4.2588;3.9978;3.7113 +;-;-;- + 122 + 1 1.347 55823.8 1.0 13128 5786 18914 HBL1_DMSO_200M_050219_1,18916 HBL1_DMSO_200M_050219_1,18916,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18917 90.763 23.0 2498000.0 25 0 348350.0 + 10173 FQAEIAQLM 9 83 525.768243370788 1049.521933808376 2 525.7684203982353 MULTI CID FTMS 0 0 0 18914 1588802.25 0.6481565168490165 -1 0.1589736938476562 3 Unmodified _FQAEIAQLM_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P 26.268140514670165 0.1969607489560049 3 [AG]A{M(Oxidation (M))|F}E{I|L}AQ{I|L}M 10 3 + 46.067 0.0 0.0 4.3894 4.3894 75.335 0.0 0.0 0.0 7.047057244614472 9.699915470362017 7.047057244614472 3.0102999566398125 0 0.8935078169319297 1.3979400086720375 0.0 0.0 [AG]A{M(Oxidation (M))|F}E{I|L}AQ{I|L}M;[AG]A{M(Oxidation (M))|F}EA{I|L}Q{I|L}M;[AG]{M(Oxidation (M))|F}AE{I|L}AQ{I|L}M;[AG]{M(Oxidation (M))|F}AEA{I|L}Q{I|L}M;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AE{I|L}AQ{I|L}M;[QA]{M(Oxidation (M))|F}E{I|L}AQ{I|L}M;[AG]A{M(Oxidation (M))|F}E{I|L}A[AG]{I|L}M;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AEA{I|L}Q{I|L}M;[QA]{M(Oxidation (M))|F}EA{I|L}Q{I|L}M;[AG]A{M(Oxidation (M))|F}EA{I|L}[AG]{I|L}M 4.3894;4.1025;4.1025;3.8157;3.7179;3.6948;3.5162;3.4311;3.408;3.2293 -;-;-;-;+;-;-;-;-;- + 407 1 1.347 52153.8 1.0 13129 5786 18914 HBL1_DMSO_200M_050219_1,18917 HBL1_DMSO_200M_050219_1,18917,FQAEIAQLM False True FQAEIAQLM 90.763466 525.768420398235 17041860.0 18914.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENSG00000080824|ENST00000216281|HSP90AA1;;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;;nc|ENSG00000205940|Q58FF8|HSP90AB2P 4.604754845301311 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18918 90.765 50.0 806880.0 25 0 87971.0 + 17932 KQVSDLISVL 10 69 551.330261306733 1100.6459696802658 2 551.3298828005791 MULTI CID FTMS 0 0 0 18914 732941.125 0.3503623888985954 -2 0.2659988403320312 4 Unmodified _KQVSDLISVL_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62496043-62497015:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5 19.361941925380144 0.5226674314761524 3 VM{I|L}{I|L}SV{I|L} 7 4 36.19 0.0 0.0 3.2881 0.0 0.0 327.1642933576188 0.0 327.1642933576188 0.0 12.88950133641059 0.0 0.0 0 0.6989700043360187 0.0 0.5 0.0 VM{I|L}{I|L}SV{I|L} 3.2881 - 132 1 1.347 40366.8 1.0 13130 5786 18914 HBL1_DMSO_200M_050219_1,18918 HBL1_DMSO_200M_050219_1,18918,KQVSDLISVL False True KQVSDLISVL 90.764802 551.329882800579 30013866.0 18914.0 ENST00000581230.5_1_17:62496043-62497015:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5 4.187106450398763 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18919 90.766 58.0 224080.0 25 0 26582.0 -1 0 38 557.3019930013577 1668.8841496042728 3 557.3021728396416 MULTI CID FTMS 0 0 0 18914 610999.3125 0.5213204631310405 1 -0.0498733520507812 5 3 D 1 -1 5.4846 0.0 0.0 0.32864 0.0 0.0 574.3145217739979 976.5192965143186 1550.8338182883165 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.32864 - 4 + 1 1.347 18126.8 1.0 13131 5786 18914 HBL1_DMSO_200M_050219_1,18919 HBL1_DMSO_200M_050219_1,18919, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18920 90.769 120.0 1011700.0 25 0 159460.0 + 4947 DGLVVLKI 8 96 428.7789292609092 855.5433055886184 2 428.7787963747978 MULTI CID FTMS 0 0 0 18914 553798.125 0.1148719846131587 4 -0.3713150024414062 6 Unmodified _DGLVVLKI_ ENSG00000147677|ENST00000521861|EIF3H;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 39.957323273325 0.2350051964751539 3 [DG]{I|L}VV{I|L}K{I|L} 8 0 [DG]{I|L} + + 43.22 13.468 4.7234 5.0517 5.0517 55.814 0.0 0.0 0.0 0.0 29.75177236951588 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.2742275032520141 + + [DG]{I|L}VV{I|L}K{I|L} 5.0517 + + 133 + 1 1.347 96425.6 1.0 13132 5786 18914 HBL1_DMSO_200M_050219_1,18920 HBL1_DMSO_200M_050219_1,18920,DGLVVLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18921 90.77 73.0 1037100.0 25 0 113930.0 + 33884 SLFPGKLEVV 10 93 544.8211903903407 1087.6278278474813 2 544.8207275271416 MULTI CID FTMS 0 0 0 18914 544794.8125 0.7926418226570704 -1 0.1589736938476562 7 Unmodified _SLFPGKLEVV_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 18.373094154950223 0.5392593366289069 3 [KG]P{I|L}EV{M(Oxidation (M))|F}TVV 10 8 + 41.489 0.0 0.0 3.8146 3.8146 77.14 0.0 0.0 0.0 1.7963790784623512 3.102306576409184 1.7963790784623512 5.752574989159953 0 0.4802046884880938 0.0 0.2742275032520141 0.0 [KG]P{I|L}EV{M(Oxidation (M))|F}TVV;[KG]P{I|L}E{M(Oxidation (M))|F}VTVV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[R{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[R{I|L}]PMVV 3.8146;3.2857;3.0269;0.44347 -;-;-;- 270 1 1.347 63571.2 1.0 13133 5786 18914 HBL1_DMSO_200M_050219_1,18921 HBL1_DMSO_200M_050219_1,18921,SLFPGKLEVV False True SLFPGKLEVV 90.770446 544.820727527142 23744272.0 18914.0 nc|ENSG00000177731|Q13045-3|FLII;;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;nc|ENSG00000177731|Q13045-2|FLII 5.7345021565755205 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18922 90.772 65.0 862180.0 25 0 99266.0 + 10366 FSMKDLFSY 9 95 569.2686675483949 1136.5227821635897 2 569.2700073122978 MULTI CID FTMS 0 0 0 18914 561949.5 0.6825679615468355 1 -0.0498733520507812 8 Unmodified _FSMKDLFSY_ REV__ENSG00000095319|ENST00000372577|NUP188;REV__nc|ENSG00000095319|Q5SRE5-2|NUP188 10.073929032068715 0.563993802247229 3 [WH]VA{I|L}DAYY 9 -1 + 29.843 0.0 0.0 2.6258 2.6258 69.174 0.0 0.0 0.0 2.2430121199290944 11.884249941294062 2.2430121199290944 1.7609125905568137 0 0.0 0.0 0.0 0.0 [WH]VA{I|L}DAYY;[WH]VAEVAYY;[WH]AV{I|L}DAYY;[WH]AVEVAYY;[HA]WV{I|L}DAYY;[HA]WVEVAYY;[WH]A{I|L}VDAYY;[WH]A{I|L}DVAYY;[HA]W{I|L}VDAYY;[HA]W{I|L}DVAYY 2.6258;2.4709;2.206;2.0511;1.8559;1.7009;1.6763;1.5213;1.3261;1.1712 -;-;-;-;-;-;-;-;-;- 647 1 1.347 50633.7 1.0 13134 5786 18914 HBL1_DMSO_200M_050219_1,18922 HBL1_DMSO_200M_050219_1,18922,FSMKDLFSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18923 90.774 105.0 1036700.0 25 0 97366.0 + 22620 LPYLVPKL 8 104 471.8050769862165 941.595601039233 2 471.8049194216728 MULTI CID FTMS 0 0 0 18914 528743.4375 0.2252258356301684 -4 0.498504638671875 9 Unmodified _LPYLVPKL_ ENSG00000089154|ENST00000300648|GCN1 74.39630413441286 0.1057069479668299 3 {I|L}PY{I|L}VPK{I|L} 8 0 + 82.389 0.0 0.0 8.7499 8.7499 96.052 0.0 0.0 0.0 65.19708496323986 14.024174299985006 14.024174299985006 13.336382574519106 0 1.4802046884880935 1.5228787452803376 0.0 0.3252574989159953 + + {I|L}PY{I|L}VPK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}VPK{I|L};{I|L}PY{I|L}V{I|L}KP;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}V{I|L}KP;{I|L}PY{I|L}[K{I|L}]VP;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[K{I|L}]VP;{I|L}{I|L}SA{I|L}{[QG]|[NA]}K{I|L};{I|L}{I|L}SAV[QA]K{I|L};{I|L}{I|L}SAV[KS]KP 8.7499;7.3335;7.1289;5.7125;4.5204;3.1041;2.8907;2.571;0.94999 +;-;-;-;-;-;-;-;- + 394 + 1 1.347 86843.7 1.0 13135 5786 18914 HBL1_DMSO_200M_050219_1,18923 HBL1_DMSO_200M_050219_1,18923,LPYLVPKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18924 90.776 75.0 643680.0 25 0 45271.0 + 44344 YLQDVIMQV 9 82 554.7898505855685 1107.565148237937 2 554.7897216677666 MULTI CID FTMS 0 0 0 18914 528352.125 0.7931473381408362 -1 0.1589736938476562 10 Unmodified _YLQDVIMQV_ ENSG00000198546|ENST00000361518|ZNF511;ENST00000482153.1_1_10:135122453-135123793:+|nuORF;nc|ENSG00000198546|Q8NB15-1|ZNF511 49.93300154707207 0.0405168250806675 3 [Y{I|L}]QDV{I|L} 6 3 35.481 0.0 0.0 3.2035 0.0 0.0 0.0 373.1559133621203 373.1559133621203 16.980844613864647 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 0.3252574989159953 0.0 + [Y{I|L}]QDV{I|L} 3.2035 + + 548 1 1.347 44226.6 1.0 13136 5786 18914 HBL1_DMSO_200M_050219_1,18924 HBL1_DMSO_200M_050219_1,18924,YLQDVIMQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18925 90.778 97.0 553590.0 25 0 50066.0 11674 GLEDTESYDQW 11 76 671.7756936121982 1341.5368342911963 2 671.7762939333916 MULTI CID FTMS 0 0 0 18914 488590.25 0.5819458159340772 2 -0.1669235229492187 11 Unmodified _GLEDTESYDQW_ ENSG00000198879|ENST00000397167|SFMBT2 8.745405648335112 0.8338865417133445 3 [EP]GDDASE 8 9 39.848 0.0 0.0 2.9703 0.0 0.0 0.0 538.1999946776842 538.1999946776842 13.38726240248075 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3807196863200844 0.0 [EP]GDDASE 2.9703 - 317 1 1.347 47148.0 1.0 13137 5786 18914 HBL1_DMSO_200M_050219_1,18925 HBL1_DMSO_200M_050219_1,18925,GLEDTESYDQW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18926 90.78 102.0 966670.0 25 0 112450.0 + 17192 KLLDIRSYL 9 109 374.229160159078 1119.665651077434 3 374.2288390994072 MULTI CID FTMS 0 0 0 18914 454306.15625 1.0 0 0.0 12 Unmodified _KLLDIRSYL_ ENSG00000103035|ENST00000219313|PSMD7 38.17557092003332 0.0854718145212029 3 K{I|L}{I|L}D{I|L}R{[CT]|[{M(Oxidation (M))|F}G]} 8 3 30.922 0.0 0.0 2.7617 0.0 0.0 159.0903461558941 0.0 159.0903461558941 0.0 0.6432073646369041 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 K{I|L}{I|L}D{I|L}R{[CT]|[{M(Oxidation (M))|F}G]} 2.7617 - 334 + 1 1.347 84641.4 1.0 13138 5786 18914 HBL1_DMSO_200M_050219_1,18926 HBL1_DMSO_200M_050219_1,18926,KLLDIRSYL True True KLLDIRSYL 90.780306 374.228839099407 3999840.5 18914.0 ENSG00000103035|ENST00000219313|PSMD7 2.196819563706716 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18927 90.783 124.0 438640.0 25 0 40660.0 + 33588 SIPDFPMHLA 10 78 564.2809876429643 1126.5474223527283 2 564.2805663943291 MULTI CID FTMS 0 0 0 18914 382281.125 0.2454433752538101 5 -0.43743896484375 13 Unmodified _SIPDFPMHLA_ ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1 34.10243960390752 0.2198439752719791 3 {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}PMHA{I|L} 10 2 + 60.56 0.0 0.0 5.3757 5.3757 89.246 0.0 0.0 0.0 14.334111370225486 9.101523083377463 9.101523083377463 30.51152522447381 0 0.3807196863200844 2.0 0.0 0.0 {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}PMHA{I|L};{[TV]|[{I|L}S]}[VS]D{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E]A{I|L};{[TV]|[{I|L}S]}P{[YC]|[HE]}[HS]HA{I|L};{[TV]|[{I|L}S]}P[WY]{[YD]|[{M(Oxidation (M))|F}M]}A{I|L} 5.3757;2.6673;2.6219;2.2687 -;-;-;- 220 + 1 1.347 47268.2 1.0 13139 5786 18914 HBL1_DMSO_200M_050219_1,18927 HBL1_DMSO_200M_050219_1,18927,SIPDFPMHLA False True SIPDFPMHLA 90.782875 564.280566394329 74254542.0 18914.0 nc|ENSG00000148840|Q5VV67-2|PPRC1;;ENSG00000148840|ENST00000278070|PPRC1 7.194506486256917 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18928 90.786 169.0 52763.0 25 0 5223.6 -1 0 24 651.3066165413575 2601.1973602990297 4 651.5580932497978 MULTI CID FTMS 0 0 0 18914 368532.15625 0.6016477649501168 -2 0.2659988403320312 14 3 Y{I|L} 2 -1 10.969 0.0 0.0 0.42169 0.0 0.0 1775.7566997539109 546.2669161432249 2322.023615897136 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 0.42169 - 10 + 1 1.347 16997.2 1.0 13140 5786 18914 HBL1_DMSO_200M_050219_1,18928 HBL1_DMSO_200M_050219_1,18928, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18929 90.79 212.0 345810.0 25 0 69307.0 + 41539 VPPAALISI 9 88 440.7789055530888 879.5432581729776 2 440.7787963747978 MULTI CID FTMS 0 0 0 18914 353963.34375 0.6691199865595034 2 -0.1669235229492187 15 Unmodified _VPPAALISI_ ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1XR1-TP73|1|fusion;TBL1XR1-TP73|2|fusion;TBL1XR1-TP73|3|fusion;TBL1XR1-TP73|4|fusion;TBL1XR1-TP73|5|fusion;TBL1XR1-TP73|6|fusion 42.96799951952854 0.0591636306142405 3 A{I|L}V{I|L}S{I|L} 6 5 35.094 0.0 0.0 3.99 0.0 0.0 265.14363295722814 0.0 265.14363295722814 0.0 5.563025007672877 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 A{I|L}V{I|L}S{I|L} 3.99 - 472 1 1.347 62932.1 1.0 13141 5786 18914 HBL1_DMSO_200M_050219_1,18929 HBL1_DMSO_200M_050219_1,18929,VPPAALISI True True VPPAALISI 90.790218 440.778796374798 11220997.0 18914.0 ENSG00000177565|ENST00000457928|TBL1XR1;;TBL1XR1-TP73|1|fusion;;TBL1XR1-TP73|2|fusion;;nc|ENSG00000101849|O60907-2|TBL1X;;TBL1XR1-TP73|5|fusion;;TBL1XR1-TP73|4|fusion;;TBL1XR1-TP73|3|fusion;;TBL1XR1-TP73|6|fusion;;ENSG00000101849|ENST00000645353|TBL1X -0.2968904804438352 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18930 90.792 94.0 721750.0 25 0 71693.0 + 37334 TIYKDFVYI 9 90 581.3132467102698 0 581.3136474490166 PEAK CID FTMS 0 0 0 18914 308364.6875 0.9661879692062816 1 -0.0498733520507812 16 Unmodified _TIYKDFVYI_ ENSG00000135686|ENST00000564996|KLHL36;ENST00000325279.4_1_16:84693236-84695736:+|nuORF;nc|ENSG00000135686|Q8N4N3-2|KLHL36 18.1463463914782 0.2188250594445807 3 AMPD{I|L}R{M(Oxidation (M))|F}E 8 8 37.121 0.0 0.0 3.1984 0.0 0.0 116.1068450840374 82.06689630679921 198.1737413908366 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.4247425010840047 AMPD{I|L}R{M(Oxidation (M))|F}E 3.1984 - 452 + 1 1.347 58584.3 1.0 13142 5786 18914 HBL1_DMSO_200M_050219_1,18930 HBL1_DMSO_200M_050219_1,18930,TIYKDFVYI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18931 90.796 187.0 487470.0 25 0 48519.0 + 20806 LLVVYPWTQR 10 71 637.866693470314 1273.718834007428 2 637.8666869997978 MULTI CID FTMS 0 0 0 18914 284979.15625 0.4598913165059299 2 -0.1669235229492187 17 Unmodified _LLVVYPWTQR_ CON__P02070;CON__Q3SX09;ENSG00000196565|ENST00000336906|HBG2;ENSG00000213931|ENST00000396895|HBE1;ENSG00000213934|ENST00000330597|HBG1;ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 59.36838082759317 0.0382430275470746 3 {I|L}{I|L}VVYPWTQR 10 0 + 80.263 0.0 0.0 6.3015 6.3015 88.212 0.0 0.0 0.0 24.209937582686425 10.13293912307448 10.13293912307448 9.164539485499262 0 1.424742501084005 1.6989700043360187 0.0 1.1382104921644451 + + {I|L}{I|L}VVYPWTQR;{I|L}{I|L}VVYPWT[AG]R;{I|L}{I|L}VVYP{NN|[MP]|[D{I|L}]|[EV]}VM{I|L};{I|L}{I|L}VVYP{[CP]|[EA]}[KS]R 6.3015;5.582;5.5059;5.0193 +;-;-;- + 210 + 1 1.347 74712.3 1.0 13143 5786 18914 HBL1_DMSO_200M_050219_1,18931 HBL1_DMSO_200M_050219_1,18931,LLVVYPWTQR True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 18932 90.8 214.0 482410.0 25 0 47569.0 + 3070 AVMEKHGTL 9 148 493.2609535902497 984.5073542472994 2 493.2606994509697 MULTI CID FTMS 0 0 0 18914 267972.59375 1.0 0 0.0 18 Unmodified _AVMEKHGTL_ REV__ENST00000467063.1_1_1:59002380-59012400:-|nuORF 26.88365393820708 0.1891292719743517 3 AV[WY]T{I|L} 6 -1 29.5 0.0 0.0 2.9964 0.0 0.0 233.1176580576494 0.0 233.1176580576494 0.0 16.827021149312493 0.0 0.0 0 0.3252574989159953 0.0 0.6237125054200234 0.0 AV[WY]T{I|L} 2.9964 - 1569 + 1 1.347 83283.3 1.0 13144 5786 18914 HBL1_DMSO_200M_050219_1,18932 HBL1_DMSO_200M_050219_1,18932,AVMEKHGTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18933 90.803 141.0 702780.0 25 0 58227.0 + 41137 VPAFVRMI 8 109 466.77428524042034 931.5340175476408 2 466.7730590701103 MULTI CID FTMS 0 0 0 18914 265442.3125 0.4751329945522353 -2 0.2659988403320312 19 Unmodified _VPAFVRMI_ ENSG00000180957|ENST00000335272|PITPNB;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;nc|ENSG00000180957|P48739-2|PITPNB;nc|ENSG00000180957|P48739-3|PITPNB 30.22481116460888 0.4082965392918993 3 VPA{M(Oxidation (M))|F}V[{I|L}T]SV 9 4 + 63.764 0.0 0.0 6.8451 6.8451 83.363 0.0 0.0 0.0 36.31691345950685 8.282184059010262 8.282184059010262 3.0102999566398125 0 0.7302046884880937 1.154901959985743 0.2059771852360797 0.0 VPA{M(Oxidation (M))|F}V[{I|L}T]SV;VPA{M(Oxidation (M))|F}T[{I|L}V]SV;VPA{M(Oxidation (M))|F}V{[WT]|[RM]}{I|L};VP[YR][{I|L}V]SV;V{I|L}CVV[{I|L}T]SV;V{I|L}CVT[{I|L}V]SV;V{I|L}CVV{[WT]|[RM]}{I|L};V{I|L}HH[WK]{I|L} 6.8451;6.5219;5.8984;3.6808;3.231;2.9078;2.2843;0.66163 -;-;+;-;-;-;-;- + 450 + 1 1.347 80711.5 1.0 13145 5786 18914 HBL1_DMSO_200M_050219_1,18933 HBL1_DMSO_200M_050219_1,18933,VPAFVRMI False True VPAFVRMI 90.802766 466.77305907011 7850577.0 18914.0 ENSG00000180957|ENST00000335272|PITPNB;;nc|ENSG00000180957|P48739-2|PITPNB;;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;;nc|ENSG00000180957|P48739-3|PITPNB 2.0462576001882558 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18934 90.807 201.0 507300.0 25 0 63365.0 12771 GVPPGLFNV 9 129 450.252815398452 898.4910778637039 2 450.2527038455009 MULTI CID FTMS 0 0 0 18914 241048.609375 0.6772914210312071 -2 0.2659988403320312 20 Unmodified _GVPPGLFNV_ ENSG00000143149|ENST00000354775|ALDH9A1;ENST00000491436.1_1_1:165638124-165649867:-|nuORF;nc|ENSG00000143149|P49189-2|ALDH9A1;nc|ENSG00000143149|P49189|ALDH9A1 23.1484247019978 0.2366544122328345 3 [VG]S{I|L}Q[WP]{I|L} 8 7 + 35.908 0.0 0.0 3.9965 3.9965 79.178 0.0 0.0 0.0 12.442190502882156 2.05136871872881 2.05136871872881 7.311675286346919 0 0.3054621874040891 1.6989700043360187 0.0 0.0 [VG]S{I|L}Q[WP]{I|L};[VG]S{I|L}{I|L}[PA]{[QD]|[EN]|[WG]|[KD]|[RS]};[VG]S{I|L}[AG][WP]{I|L};[VG]S{I|L}{I|L}[WQ]P;[VG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L}QP;[VG]S{I|L}Q[W{I|L}]P;[PA]{M(Oxidation (M))|F}N{I|L}{I|L}QP;R[KC]P[WP]{I|L};[PA]{M(Oxidation (M))|F}VQ{I|L}QP;[PA]V{M(Oxidation (M))|F}K{I|L}QP 3.9965;3.1827;2.9656;2.7642;2.6136;2.5173;2.0742;1.9232;1.8273;1.6001 -;-;-;-;-;-;-;-;-;- 438 + 1 1.347 84398.2 1.0 13146 5786 18914 HBL1_DMSO_200M_050219_1,18934 HBL1_DMSO_200M_050219_1,18934,GVPPGLFNV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18936 90.811 17.0 3659500.0 25 0 543760.0 + 10217 FQIVNPHLL 9 80 540.8137926044848 1079.6130322757697 2 540.8140746951103 MULTI CID FTMS 0 0 0 18935 2913391.5 0.9653899694450234 1 -0.1170501708984375 1 Unmodified _FQIVNPHLL_ ENSG00000167325|ENST00000300738|RRM1 34.10243960390752 0.1078313939113124 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VNPH{I|L}{I|L} 9 0 + 47.33 0.0 0.0 4.3839 4.3839 82.344 0.0 0.0 0.0 27.94408732588997 1.267186419914097 1.267186419914097 9.208187539523747 0 0.9247425010840048 1.0969100130080565 0.0 0.0 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VNPH{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VGGPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[KC]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[KC]{I|L}C{I|L}{I|L};[H{I|L}][WR]V{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]P{I|L}[KC]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.3839;3.531;2.3931;2.2052;1.8416;1.7209 +;-;-;-;-;- + 203 + 1 1.347 51561.4 1.0 13147 5787 18935 HBL1_DMSO_200M_050219_1,18936 HBL1_DMSO_200M_050219_1,18936,FQIVNPHLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18937 90.812 11.0 5047300.0 25 0 286520.0 + 4186 DAPIVAHLW 9 92 511.27712008281816 1020.5396872324364 2 511.2773010134697 MULTI CID FTMS 0 0 0 18935 2903575.25 0.3309702185817265 3 -0.321441650390625 2 Unmodified _DAPIVAHLW_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 49.66892048692302 0.0410958345688192 3 {[DA]|[EG]}P{I|L}VAW[H{I|L}] 9 2 + 46.99 0.0 0.0 4.6044 4.6044 73.09 0.0 0.0 0.0 8.484769324350552 1.249387366082999 1.249387366082999 1.249387366082999 0 0.6109243748081782 1.5228787452803376 0.0 0.0 {[DA]|[EG]}P{I|L}VAW[H{I|L}];{[DA]|[EG]}P{I|L}VAH{I|L}W;{[DA]|[EG]}P{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[H{I|L}];{[DA]|[EG]}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V[H{I|L}];{[DA]|[EG]}P{I|L}[NG][KG][H{I|L}];{[DA]|[EG]}W[PA]{I|L}V[H{I|L}];[{I|L}P]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AV{I|L}[HQ];[{I|L}P][WE]V{I|L}[HQ];WP{I|L}[R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}];W{[DA]|[EG]}[PA]{I|L}V[H{I|L}] 4.6044;4.482;4.3577;3.5296;3.1604;3.0577;2.9353;2.768;2.6774;1.5655 -;+;-;-;-;-;-;-;-;- + 578 + 1 1.347 51096.2 1.0 13148 5787 18935 HBL1_DMSO_200M_050219_1,18937 HBL1_DMSO_200M_050219_1,18937,DAPIVAHLW True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18938 90.813 24.0 2266400.0 25 0 257140.0 + 2413 AQQELKLLL 9 86 528.3265052661409 1054.6384575990817 2 528.3268920779228 MULTI CID FTMS 0 0 0 18935 2271723.0 0.8934563939034224 2 -0.2145309448242187 3 Unmodified _AQQELKLLL_ ENSG00000119041|ENST00000263956|GTF3C3 63.22749603027936 0.0242951379232427 3 [QA]QE{I|L}K{I|L}{I|L}{I|L} 9 0 + 70.17 0.0 0.0 6.6534 6.6534 89.419 0.0 0.0 0.0 11.174231110997605 11.174231110997605 11.174231110997605 9.208187539523742 0 1.8979400086720373 0.8860566476931632 0.0 0.4247425010840047 + + [QA]QE{I|L}K{I|L}{I|L}{I|L};[QA][AG]E{I|L}K{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}K{I|L}{I|L}[QA]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}K{I|L}[QA]{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}K{I|L}{I|L}{I|L}[QA];{I|L}{I|L}KEQ{I|L}[QA]{I|L};{I|L}{I|L}KEQ[QA]{I|L}{I|L};{I|L}{I|L}KEQ{I|L}{I|L}[QA];[K{I|L}]{I|L}EQ{I|L}[QA]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QA]{I|L}K{I|L}{I|L}{I|L} 6.6534;5.7803;5.3997;4.9673;4.9473;4.8257;4.3933;4.3733;4.0795;3.9677 +;-;-;-;-;-;-;-;-;- + 405 1 1.347 43485.7 1.0 13149 5787 18935 HBL1_DMSO_200M_050219_1,18938 HBL1_DMSO_200M_050219_1,18938,AQQELKLLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18939 90.815 38.0 1713200.0 25 0 112760.0 + 18281 KVIGFLEEV 9 85 517.29978478315 1032.5850166331 2 517.2997924685478 MULTI CID FTMS 0 0 0 18935 1091202.25 1.0 0 0.0 4 Unmodified _KVIGFLEEV_ ENSG00000058335|ENST00000558480|RASGRF1;ENST00000560334.5_1_15:79271198-79356973:-|nuORF;nc|ENSG00000058335|Q13972-2|RASGRF1;nc|ENSG00000058335|Q13972|RASGRF1 21.53697664764585 0.2571576504437394 3 {I|L}EEV 4 5 31.67 0.0 0.0 3.0671 0.0 0.0 544.3388539044937 0.0 544.3388539044937 0.0 14.680475292681264 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 + {I|L}EEV 3.0671 + + 68 1 1.347 58142.6 1.0 13150 5787 18935 HBL1_DMSO_200M_050219_1,18939 HBL1_DMSO_200M_050219_1,18939,KVIGFLEEV False True KVIGFLEEV 90.814516 517.299792468548 10848672.0 18935.0 ENST00000560334.5_1_15:79271198-79356973:-|nuORF;;nc|ENSG00000058335|Q13972|RASGRF1;;ENSG00000058335|ENST00000558480|RASGRF1;;nc|ENSG00000058335|Q13972-2|RASGRF1 4.385660966237386 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18940 90.816 63.0 1032900.0 25 0 127130.0 + 22388 LPSSVLHII 9 93 489.8031366181117 977.5917203030232 2 489.8031799197197 MULTI CID FTMS 0 0 0 18935 749779.25 0.3016367302968949 -3 0.3158721923828125 5 Unmodified _LPSSVLHII_ ENSG00000000460|ENST00000359326|C1orf112 57.47134341890925 0.0274820932774257 3 {I|L}PS[VS]{I|L}H{I|L}{I|L} 9 0 + 67.031 0.0 0.0 6.8568 6.8568 85.002 0.0 0.0 0.0 34.22785642388658 9.362915595803017 9.362915595803017 4.119996000585154 0 1.610924374808178 2.0 0.0 0.0 + + {I|L}PS[VS]{I|L}H{I|L}{I|L};{I|L}PS{I|L}[VS]H{I|L}{I|L};{I|L}PS[VS]{I|L}{I|L}H{I|L};{I|L}PS{I|L}[VS]{I|L}H{I|L};{I|L}PS[KP]NP{I|L}{I|L};{I|L}PS[KP]{[VA]|[{I|L}G]}APV;{I|L}PS[KP][Q{I|L}]PV;{I|L}TVP[VS]H{I|L}{I|L};{I|L}TVP[VS]{I|L}H{I|L} 6.8568;6.4353;5.8105;5.389;4.8253;3.3056;3.2532;2.2977;1.2514 +;-;-;-;-;-;-;-;- + 821 + 1 1.347 58628.7 1.0 13151 5787 18935 HBL1_DMSO_200M_050219_1,18940 HBL1_DMSO_200M_050219_1,18940,LPSSVLHII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18941 90.818 71.0 787990.0 25 0 81356.0 + 36592 TAMDVVYAL 9 89 491.7490742838694 981.4835956345388 2 491.7494384646416 MULTI CID FTMS 0 0 0 18935 501642.6875 0.9206435743844832 -1 0.0498733520507812 6 Unmodified _TAMDVVYAL_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 44.40701690623563 0.0526327925666318 3 [TA][MD]VV 6 3 29.855 0.0 0.0 3.0419 0.0 0.0 0.0 362.1685070937763 362.1685070937763 10.647124887093824 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.274227503252014 0.0 + [TA][MD]VV 3.0419 + + 213 1 1.347 50044.1 1.0 13152 5787 18935 HBL1_DMSO_200M_050219_1,18941 HBL1_DMSO_200M_050219_1,18941,TAMDVVYAL True True TAMDVVYAL 90.817714 491.749438464642 3203609.0 18935.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 4.265702247619629 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18942 90.819 76.0 714120.0 25 0 168460.0 + + 37197 IPMHGPLLI 9 94 495.2900240193716 988.5654951055432 2 495.7930786013603 MULTI CID FTMS 0 0 0 18935 491548.84375 0.2449026602430324 4 -0.3875656127929687 7 Unmodified _TIGSIICGII_ ENST00000398258.7_1_3:107774387-107777202:-|nuORF;nc|ENSG00000196776|Q08722-4|CD47;nc|ENSG00000196776|Q08722-3|CD47;ENSG00000196776|ENST00000361309|CD47;nc|ENSG00000196776|Q08722-2|CD47 11.640296217721598 0.652229146672156 3 {I|L}{I|L}P[C(Carbamidomethyl (C))M]{I|L}{I|L} 7 -1 28.716 0.0 0.0 2.9048 0.0 0.0 130.0923638572994 0.0 130.0923638572994 0.0 16.726307269461742 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}P[C(Carbamidomethyl (C))M]{I|L}{I|L} 2.9048 - 185 + 1 1.347 47257.9 1.0 13153 5787 18935 HBL1_DMSO_200M_050219_1,18942 HBL1_DMSO_200M_050219_1,18942,TIGSIICGII False False IPMHGPLLI 90.819462 495.79307860136 52698344.0 18935.0 ENST00000398258.7_1_3:107774387-107777202:-|nuORF;;nc|ENSG00000196776|Q08722-4|CD47;;nc|ENSG00000196776|Q08722-3|CD47;;ENSG00000196776|ENST00000361309|CD47;;nc|ENSG00000196776|Q08722-2|CD47 2.449365292986234 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18943 90.821 58.0 778200.0 25 0 111370.0 + 32042 RVLDFDPMAV 10 72 581.7991914244351 1161.58382991567 2 581.7975341677666 MULTI CID FTMS 0 0 0 18935 485693.6875 0.5000895143034977 -1 0.0498733520507812 8 Unmodified _RVLDFDPMAV_ ENSG00000140451|ENST00000559239|PIF1;nc|ENSG00000140451|Q9H611-3|PIF1;nc|ENSG00000140451|Q9H611-4|PIF1 20.871137199558856 0.4973446006067743 3 {M(Oxidation (M))|F}DPMAV 6 4 45.094 0.0 0.0 3.8821 0.0 0.0 483.2818417506159 0.0 483.2818417506159 0.0 31.11432819416656 0.0 0.0 0 1.242992819099939 0.0 0.4247425010840047 0.0 + {M(Oxidation (M))|F}DPMAV 3.8821 + + 106 1 1.347 43245.3 1.0 13154 5787 18935 HBL1_DMSO_200M_050219_1,18943 HBL1_DMSO_200M_050219_1,18943,RVLDFDPMAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18944 90.826 274.0 318520.0 25 0 16285.0 -1 0 90 943.9720991859338 1885.929645438668 2 944.4728271365166 MULTI CID FTMS 0 0 0 18935 294254.71875 0.8723336626457449 -1 0.0498733520507812 9 3 [NP]D{I|L}{I|L}T 6 -1 43.161 0.0 0.0 2.2886 0.0 0.0 0.0 1229.55718385103 1229.55718385103 13.913694763007951 0.0 0.0 0.0 0 0.0 0.958607314841775 1.2059771852360797 0.0 [NP]D{I|L}{I|L}T 2.2886 - 453 1 1.347 61524.2 1.0 13155 5787 18935 HBL1_DMSO_200M_050219_1,18944 HBL1_DMSO_200M_050219_1,18944, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18945 90.838 671.0 159080.0 25 0 6023.8 -1 0 125 1058.5121713488882 3172.5146846468647 3 1058.844165027142 MULTI CID FTMS 0 0 0 18935 279364.03125 1.0 0 0.0 10 3 [MN]M{I|L}M 5 -1 42.218 0.0 0.0 1.3308 0.0 0.0 0.0 2549.1576136919803 2549.1576136919803 13.389311724773949 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MN]M{I|L}M 1.3308 - 3606 + 1 1.347 71723.3 1.0 13156 5787 18935 HBL1_DMSO_200M_050219_1,18945 HBL1_DMSO_200M_050219_1,18945, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18946 90.84 112.0 580240.0 25 0 151060.0 + 11534 GIPHSFALI 9 85 477.77346107124447 953.532369209289 2 477.7736694216728 MULTI CID FTMS 0 0 0 18935 300269.4375 0.7429491858900443 -1 0.0498733520507812 11 Unmodified _GIPHSFALI_ ENSG00000007923|ENST00000377577|DNAJC11;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;nc|ENSG00000007923|Q9NVH1-3|DNAJC11 28.486842064014134 0.1687311288560894 3 [{I|L}A]T[HC]A{I|L}{I|L}{I|L} 9 5 + 44.267 0.0 0.0 4.6424 4.6424 85.877 0.0 0.0 0.0 9.854087158783573 18.40288749933073 9.854087158783573 18.53743336992704 0 0.8494850021680094 1.3979400086720375 0.3252574989159953 0.0 [{I|L}A]T[HC]A{I|L}{I|L}{I|L};[VS]V[HC]A{I|L}{I|L}{I|L};[{I|L}A]T[HC]VVV{I|L};[VS]V[HC]VVV{I|L} 4.6424;2.6983;2.5208;0.57671 -;-;-;- 367 1 1.347 55501.9 1.0 13157 5787 18935 HBL1_DMSO_200M_050219_1,18946 HBL1_DMSO_200M_050219_1,18946,GIPHSFALI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18947 90.845 278.0 301750.0 25 0 25324.0 -1 0 97 1062.9857988602455 2123.957044787291 2 1063.488696277142 MULTI CID FTMS 0 0 0 18935 267326.3125 0.5972923957588706 -1 0.0498733520507812 12 3 {[TV]|[{I|L}S]}AADTA{I|L}Y 9 -1 81.978 0.0 0.0 3.8597 0.0 0.0 0.0 1215.4827765590287 1215.4827765590287 40.04863339151541 0.0 0.0 0.0 0 1.424742501084005 1.5228787452803376 2.416386562212267 0.0 {[TV]|[{I|L}S]}AADTA{I|L}Y 3.8597 - 4335 1 1.347 59540.4 1.0 13158 5787 18935 HBL1_DMSO_200M_050219_1,18947 HBL1_DMSO_200M_050219_1,18947, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18948 90.85 236.0 218820.0 25 0 33517.0 + -1 NPYYSDMELIA 11 101 666.2934485303851 1330.5723441275702 2 666.7951537966728 MULTI CID FTMS 0 0 0 18935 211140.59375 0.4015476748564615 -5 0.5483779907226562 13 Oxidation (M) _NPYYSDM(Oxidation (M))ELIA_ REV__ENSG00000126822|ENST00000247226|PLEKHG3;REV__ENST00000490180.2_1_14:65198440-65203695:+|nuORF;REV__nc|ENSG00000126822|A1L390-3|PLEKHG3 8.155526934196011 0.8366696279279818 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYP 5 -1 31.471 0.0 0.0 2.3652 0.0 0.0 0.0 693.2747387732043 693.2747387732043 17.49114457050446 0.0 0.0 0.0 0 0.5 1.154901959985743 0.0 0.3494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYP 2.3652 - 355 1 1.347 42444.2 1.0 13159 5787 18935 HBL1_DMSO_200M_050219_1,18948 HBL1_DMSO_200M_050219_1,18948,NPYYSDMELIA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18949 90.858 474.0 226100.0 25 0 37519.0 + 21414 LPGPILQSI 9 142 469.289747928835 936.56494292447 2 469.2896606326103 MULTI CID FTMS 0 0 0 18935 205030.375 0.7095931432309219 3 -0.321441650390625 14 Unmodified _LPGPILQSI_ ENSG00000132128|ENST00000617190|LRRC41;ENST00000469150.1_1_1:46763228-46764055:-|nuORF;nc|ENSG00000132128|Q15345-3|LRRC41 49.66892048692302 0.0410958345688192 3 [{I|L}P]GP{I|L}{I|L}QS{I|L} 9 0 + 52.073 0.0 0.0 5.56 5.56 79.286 0.0 0.0 0.0 17.14808585021855 10.330145895351848 10.330145895351848 3.0102999566398125 0 0.8182503180159344 1.5228787452803376 0.0 0.0 + + [{I|L}P]GP{I|L}{I|L}QS{I|L};[{I|L}P]GP{I|L}Q{I|L}S{I|L};[{I|L}P]G{I|L}P{I|L}QS{I|L};[{I|L}P]GP{I|L}{I|L}[AG]S{I|L};[{I|L}P]{I|L}GP{I|L}QS{I|L};[{I|L}P]G{I|L}PQ{I|L}S{I|L};[{I|L}P]GP{I|L}[AG]{I|L}S{I|L};[{I|L}P]{I|L}GPQ{I|L}S{I|L};[{I|L}P]G{I|L}P{I|L}[AG]S{I|L};{[VA]|[{I|L}G]}PP{I|L}{I|L}QS{I|L} 5.56;5.2386;4.7292;4.5768;4.4923;4.4078;4.2554;4.1709;3.746;3.7291 +;-;-;-;-;-;-;-;-;- + 349 1 1.347 86477.7 1.0 13160 5787 18935 HBL1_DMSO_200M_050219_1,18949 HBL1_DMSO_200M_050219_1,18949,LPGPILQSI True True LPGPILQSI 90.858029 469.28966063261 7796427.0 18935.0 ENSG00000132128|ENST00000617190|LRRC41;;ENST00000469150.1_1_1:46763228-46764055:-|nuORF;;nc|ENSG00000132128|Q15345-3|LRRC41 3.7714572747548414 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18950 90.861 161.0 360840.0 25 0 31916.0 + -1 TIITKPYCF 9 98 571.8000100132143 1141.5854670932283 2 571.8011962771416 MULTI CID FTMS 0 0 0 18935 206709.15625 0.8028471507131167 2 -0.2145309448242187 15 Carbamidomethyl (C) _TIITKPYC(Carbamidomethyl (C))F_ REV__ENSG00000119913|ENST00000646139|TECTB 18.13498045792455 0.3457906370836843 3 [{I|L}T]{I|L}[WM]{I|L}P 7 -1 21.541 0.0 0.0 1.8869 0.0 0.0 0.0 284.0964716398641 284.0964716398641 8.04576644454535 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.555462187404089 0.0 [{I|L}T]{I|L}[WM]{I|L}P 1.8869 - 249 1 1.347 51906.9 1.0 13161 5787 18935 HBL1_DMSO_200M_050219_1,18950 HBL1_DMSO_200M_050219_1,18950,TIITKPYCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18951 90.875 800.0 193160.0 25 0 29628.0 -1 0 152 381.7417499825741 761.4689470319481 2 381.7413513064384 MULTI CID FTMS 0 0 0 18935 165580.984375 1.0 0 0.0 16 3 {[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}K{I|L} 6 -1 + 48.542 0.0 0.0 6.3747 6.3747 78.268 0.0 0.0 0.0 21.706962271689747 0.7918124604762511 0.7918124604762511 0.7918124604762511 0 0.25 1.5228787452803376 0.0 0.2396518287104437 {[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}K{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}{I|L}K;{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}{M(Oxidation (M))|F}K 6.3747;6.2708;4.8462 -;-;- 107 + 1 1.347 124070.9 0.6200000047683716 13162 5787 18935 HBL1_DMSO_200M_050219_1,18951 HBL1_DMSO_200M_050219_1,18951, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18952 90.882 324.0 349550.0 25 0 35067.0 -1 0 145 577.3215906023308 576.3143141357308 1 577.3233520388603 MULTI CID FTMS 0 0 0 18935 170033.515625 1.0 0 0.0 17 3 {I|L} 1 -1 9.9148 0.0 0.0 1.7204 0.0 0.0 445.219356715612 0.0 445.219356715612 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.7204 - 36 + 1 1.347 89715.0 1.0 13163 5787 18935 HBL1_DMSO_200M_050219_1,18952 HBL1_DMSO_200M_050219_1,18952, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18953 90.896 800.0 457900.0 25 0 13226.0 -1 0 127 728.6869493335487 2183.039018600846 3 729.3563720583916 MULTI CID FTMS 0 0 0 18935 154478.0625 0.9636034999914718 7 -0.7304000854492188 18 3 {[TV]|[{I|L}S]}NPS{I|L}V 7 -1 53.122 0.0 0.0 2.4334 0.0 0.0 0.0 1469.6213373731248 1469.6213373731248 13.273190340732931 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.5506831147923208 0.8441876774005248 {[TV]|[{I|L}S]}NPS{I|L}V 2.4334 - 21380 1 1.347 256982.8 0.8700000047683716 13164 5787 18935 HBL1_DMSO_200M_050219_1,18953 HBL1_DMSO_200M_050219_1,18953, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18954 90.91 800.0 108790.0 25 0 28878.0 -1 0 91 1109.503135473234 2216.991718013268 2 1110.504565417767 MULTI CID FTMS 0 0 0 18935 138533.5 1.0 0 0.0 19 3 {[QV]|[N{I|L}]|[RA]|[KV]}VMEVE[Y{M(Oxidation (M))|F}]ANQQA[YG]M[NP] 19 -1 {[QV]|[N{I|L}]|[RA]|[KV]}VME + + 38.624 20.635 3.5196 1.7422 1.7422 48.671 0.0 0.0 0.0 0.0 17.989182215261504 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 {[QV]|[N{I|L}]|[RA]|[KV]}VMEVE[Y{M(Oxidation (M))|F}]ANQQA[YG]M[NP] 1.7422 - 3324 + 1 1.347 62250.7 0.8299999833106995 13165 5787 18935 HBL1_DMSO_200M_050219_1,18954 HBL1_DMSO_200M_050219_1,18954, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18955 90.924 800.0 97296.0 25 0 2895.9 + 28296 PRPWHWHWRRR 11 122 835.4490931096985 1668.883633286197 2 835.4499389529228 MULTI CID FTMS 0 0 0 18935 121282.28125 0.6052836870805082 3 -0.321441650390625 20 Unmodified _PRPWHWHWRRR_ REV__ENST00000321582.9_1_9:124855435-124855555:-|nuORF 0.0833504608790944 0.8747546825782322 3 V{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}D 12 -1 105.78 0.0 0.0 6.3381 0.0 0.0 0.0 370.2099703424438 370.2099703424438 92.67641951772512 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.4247425010840047 0.0 V{I|L}Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}D 6.3381 - 3118 + 1 1.347 56334.0 0.8399999737739563 13166 5787 18935 HBL1_DMSO_200M_050219_1,18955 HBL1_DMSO_200M_050219_1,18955,PRPWHWHWRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18957 90.928 10.0 4425700.0 25 0 490220.0 33428 SIAASSIVTL 10 72 481.2819446808776 960.5493364285552 2 481.2821838259697 MULTI CID FTMS 0 0 0 18956 7103558.5 1.0 0 0.0 1 Unmodified _SIAASSIVTL_ ENSG00000205678|ENST00000381210|TECRL 46.020951573049366 0.1035046897853725 3 [{I|L}T]SQS{I|L} 6 7 41.578 0.0 0.0 4.3286 0.0 0.0 0.0 328.1884104854491 328.1884104854491 18.474184576165342 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.75 0.0 [{I|L}T]SQS{I|L} 4.3286 - 458 1 1.356 40725.4 1.0 13167 5788 18956 HBL1_DMSO_200M_050219_1,18957 HBL1_DMSO_200M_050219_1,18957,SIAASSIVTL True True SQITSLVTL 90.92803 481.28218382597 101078912.0 18956.0 ENST00000477223.1_1_7:103767297-103805736:-|nuORF;;ENSG00000164815|ENST00000297431|ORC5 4.351084550221761 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18958 90.929 13.0 3943300.0 25 0 272050.0 + 35414 STIRLLTSL 9 86 502.3119414277781 1002.609329922356 2 502.3115112185478 MULTI CID FTMS 0 0 0 18956 4282785.0 0.3920102595964956 3 -0.2705154418945312 2 Unmodified _STIRLLTSL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 67.83816525789305 0.0219346420158844 3 {[MG]|[TS]}[R{I|L}]{I|L}{I|L}TS{I|L} 9 0 + 61.239 0.0 0.0 6.108 6.108 82.628 0.0 0.0 0.0 4.144068328487123 14.973024840566469 4.144068328487123 4.144068328487123 0 2.004432191740108 0.0 1.4361818737241734 0.0 + + {[MG]|[TS]}[R{I|L}]{I|L}{I|L}TS{I|L};{[TV]|[{I|L}S]}G{[TV]|[{I|L}S]}{I|L}{I|L}TS{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[TV]|[{I|L}S]}{I|L}{I|L}TS{I|L};[HV]T[KG]{I|L}VH{I|L} 6.108;5.6946;4.9732;4.049 +;-;-;- + 224 1 1.356 46422.8 1.0 13168 5788 18956 HBL1_DMSO_200M_050219_1,18958 HBL1_DMSO_200M_050219_1,18958,STIRLLTSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18959 90.93 13.0 4143100.0 25 0 325990.0 + 22305 LPSELIVHI 9 82 510.8081106318465 1019.601668330493 2 510.8083373904228 MULTI CID FTMS 0 0 0 18956 3739994.25 1.0 0 0.0 3 Unmodified _LPSELIVHI_ ENSG00000165355|ENST00000298097|FBXO33 50.855029805455786 0.0384952370514206 3 {I|L}PSE{I|L}{I|L}VH{I|L} 9 0 + 93.141 0.0 0.0 9.135 9.135 98.742 0.0 0.0 0.0 64.67010230128993 10.74753464049519 10.74753464049519 52.730012720637376 0 1.424742501084005 2.0 0.0 0.0 + + {I|L}PSE{I|L}{I|L}VH{I|L};{I|L}P[RK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H{I|L};{I|L}P[RK][HA]{I|L}W;{I|L}P[RK][HA]W{I|L};{I|L}P[KG][R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}];{I|L}[Y{I|L}]{I|L}{[TV]|[{I|L}S]}{I|L}W;{I|L}[Y{I|L}]{I|L}{[TV]|[{I|L}S]}W{I|L} 9.135;3.9634;3.6681;3.3729;2.9532;0.89972;0.60448 +;-;-;-;-;-;- + 349 + 1 1.356 51597.0 1.0 13169 5788 18956 HBL1_DMSO_200M_050219_1,18959 HBL1_DMSO_200M_050219_1,18959,LPSELIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18960 90.932 27.0 1953300.0 25 0 286380.0 + 44974 YPRLSIPNL 9 79 536.8111891018779 1071.6078252705556 2 536.8105346560478 MULTI CID FTMS 0 0 0 18956 1985007.125 0.7995964268037054 -4 0.43292236328125 4 Unmodified _YPRLSIPNL_ ENSG00000242265|ENST00000612748|PEG10;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 36.12702656103203 0.0967173616627612 3 E{I|L}[YK]{I|L}PN{I|L} 8 5 31.41 0.0 0.0 2.9312 0.0 0.0 83.03775984931796 0.0 83.03775984931796 0.0 16.730011566535996 0.0 0.0 0 1.0440228147639203 0.0 0.9802046884880936 0.0 E{I|L}[YK]{I|L}PN{I|L} 2.9312 - 108 1 1.356 48538.1 1.0 13170 5788 18956 HBL1_DMSO_200M_050219_1,18960 HBL1_DMSO_200M_050219_1,18960,YPRLSIPNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18961 90.933 35.0 1676400.0 25 0 239090.0 + 26521 NVIDNLIVA 9 85 485.78227411203727 969.5499952908746 2 485.7820922732353 MULTI CID FTMS 0 0 0 18956 1802094.875 0.0149468692071489 8 -0.8416900634765625 5 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 32.30548876998284 0.1201446275138228 3 [{I|L}V]N[DN]{I|L} 6 5 19.727 0.0 0.0 2.0347 0.0 0.0 0.0 298.1755314032273 298.1755314032273 5.5702910683108815 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.805462187404089 [{I|L}V]N[DN]{I|L} 2.0347 - 326 1 1.356 50338.7 1.0 13171 5788 18956 HBL1_DMSO_200M_050219_1,18961 HBL1_DMSO_200M_050219_1,18961,NVIDNLIVA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18962 90.934 31.0 1809000.0 25 0 183830.0 + 20273 LLDRFLATV 9 90 524.3151118143463 1046.6156706954926 2 524.3140746951103 MULTI CID FTMS 0 0 0 18956 1402345.875 1.0 0 0.0 6 Unmodified _LLDRFLATV_ ENSG00000118816|ENST00000237654|CCNI;nc|ENSG00000118816|Q14094-2|CCNI 61.60191391372663 0.0251951588191061 3 {I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}ATV 9 0 + 56.247 0.0 0.0 5.3741 5.3741 80.882 0.0 0.0 0.0 7.864850325040784 4.701140738196017 4.701140738196017 4.701140738196017 0 0.8807196863200843 1.6989700043360187 0.5 0.0 + + {I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}ATV;{I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}AS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}{I|L}ATV;[VS]{[QN]|[E{I|L}]|[KN]}Q{I|L}{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}{I|L}AS{I|L};{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}Q{I|L}{M(Oxidation (M))|F}{I|L}V;[VS]{[QN]|[E{I|L}]|[KN]}Q{I|L}{M(Oxidation (M))|F}V{I|L};{[TV]|[{I|L}S]}A{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}{I|L}V;[TA][KQ]Q{I|L}{M(Oxidation (M))|F}{I|L}V 5.3741;4.925;4.6227;4.2479;4.1735;4.1168;4.0528;3.7987;3.7829;3.7727 +;-;-;-;-;-;-;-;-;- + 566 1 1.356 52911.1 1.0 13172 5788 18956 HBL1_DMSO_200M_050219_1,18962 HBL1_DMSO_200M_050219_1,18962,LLDRFLATV True True LLDRFLATV 90.933924 524.31407469511 9214334.0 18956.0 ENSG00000118816|ENST00000237654|CCNI;;nc|ENSG00000118816|Q14094-2|CCNI 6.007280031840007 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18963 90.935 45.0 1924400.0 25 0 146390.0 + 33650 FLQPELVKL 9 107 542.8339757946347 1083.6533986560694 2 543.8319579958916 MULTI CID FTMS 0 0 0 18956 1052434.0 1.0 0 0.0 7 Unmodified _SISPVLEVKL_ nc|ENSG00000068878|Q14997-2|PSME4;ENSG00000068878|ENST00000404125|PSME4 13.042465956692816 0.6287021003332052 3 [EP]{I|L}VKGV 7 7 26.641 0.0 0.0 2.4584 0.0 0.0 0.0 358.1962813067132 358.1962813067132 1.836359671115212 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.2396518287104437 0.0 [EP]{I|L}VKGV 2.4584 - 617 1 1.356 68363.9 1.0 13173 5788 18956 HBL1_DMSO_200M_050219_1,18963 HBL1_DMSO_200M_050219_1,18963,SISPVLEVKL False False FLQPELVKL 90.935163 543.831957995892 9262754.0 18956.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4 4.73648198445638 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18964 90.936 28.0 1671300.0 25 0 214090.0 + 15496 KVFSAFITV 9 81 506.29836763944536 1010.5821823456909 2 506.2967101931572 MULTI CID FTMS 0 0 0 18956 1132933.0 1.0 0 0.0 8 Unmodified _IPSWVPLTV_ ENST00000477069.5_1_9:131747266-131765892:+|nuORF;ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188 23.1484247019978 0.2366544122328345 3 [VP]H[KA]{M(Oxidation (M))|F}{I|L}TV 9 5 + 35.512 0.0 0.0 3.514 3.514 71.472 0.0 0.0 0.0 0.4139534807110081 18.856603226686705 0.4139534807110081 2.07947003740248 0 0.7429928190999391 1.0969100130080565 0.0 0.0 [VP]H[KA]{M(Oxidation (M))|F}{I|L}TV;{[TV]|[{I|L}S]}[HD]VK{I|L}TV;{[TV]|[{I|L}S]}[HD]V{I|L}KTV;[VP][PG]KWKTV;{[TV]|[{I|L}S]}[HS][RV]{I|L}TV 3.514;3.3083;2.6645;1.8737;1.4528 -;-;-;-;- 178 1 1.356 45125.0 1.0 13174 5788 18956 HBL1_DMSO_200M_050219_1,18964 HBL1_DMSO_200M_050219_1,18964,IPSWVPLTV False False KVFSAFITV 90.936343 506.296710193157 7508350.0 18956.0 ENST00000477069.5_1_9:131747266-131765892:+|nuORF;;ENSG00000095319|ENST00000372577|NUP188;;nc|ENSG00000095319|Q5SRE5-2|NUP188 4.067473252614339 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18965 90.938 62.0 808170.0 25 0 63719.0 + 38724 TTYEGIFKTL 10 84 586.8136899320438 1171.6128269308874 2 586.8135864138603 MULTI CID FTMS 0 0 0 18956 1017986.875 0.60229111714166 1 -0.0974807739257812 9 Unmodified _TTYEGIFKTL_ ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000432006.1_1_7:16625648-16626215:-|nuORF;ENST00000561539.1_1_16:28836974-28837213:+|nuORF;ENST00000562867.5_1_16:28834808-28837752:+|nuORF;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ENST00000566080.1_1_16:28837054-28837213:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 55.50274090549119 0.048383292844968 3 {[DS]|[MA]|[CV]|TT}YE{[VA]|[{I|L}G]}{M(Oxidation (M))|F}KT{I|L} 10 0 + 50.807 0.0 0.0 4.3365 4.3365 81.772 0.0 0.0 0.0 23.63689277089189 19.916440611282624 19.916440611282624 9.19801864735419 0 0.4247425010840047 0.0 1.416386562212267 0.0 + + {[DS]|[MA]|[CV]|TT}YE{[VA]|[{I|L}G]}{M(Oxidation (M))|F}KT{I|L};{[DS]|[MA]|[CV]|TT}Y{M(Oxidation (M))|F}{I|L}WKT{I|L};{[DS]|[MA]|[CV]|TT}Y[W{I|L}]{M(Oxidation (M))|F}KT{I|L};{[DS]|[MA]|[CV]|TT}Y{M(Oxidation (M))|F}{I|L}[KT]W{I|L} 4.3365;3.5514;3.454;1.9288 +;-;-;- + 265 + 1 1.356 44068.5 1.0 13175 5788 18956 HBL1_DMSO_200M_050219_1,18965 HBL1_DMSO_200M_050219_1,18965,TTYEGIFKTL True True TTYEGIFKTL 90.937874 586.81358641386 24951042.0 18956.0 ENST00000563314.5_1_16:28834580-28846939:+|nuORF;;ENST00000561539.1_1_16:28836974-28837213:+|nuORF;;ENST00000562867.5_1_16:28834808-28837752:+|nuORF;;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;;ENST00000566080.1_1_16:28837054-28837213:+|nuORF;;ENST00000432006.1_1_7:16625648-16626215:-|nuORF;;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;;ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;;ENSG00000168488|ENST00000336783|ATXN2L;;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;;nc|ENSG00000168488|Q8WWM7-5|ATXN2L 8.97850259145101 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18966 90.94 69.0 1927000.0 25 0 278720.0 + 26356 NSNHMDPFA 9 146 516.7132182130775 1031.411883492955 2 516.7137328982353 MULTI CID FTMS 0 0 0 18956 973975.625 1.0 0 0.0 10 Unmodified _NSNHMDPFA_ REV__ENSG00000110693|ENST00000683767|SOX6;REV__ENSG00000134532|ENST00000451604|SOX5;REV__nc|ENSG00000110693|P35712-2|SOX6;REV__nc|ENSG00000110693|P35712-3|SOX6;REV__nc|ENSG00000110693|P35712-4|SOX6;REV__nc|ENSG00000134532|P35711-2|SOX5;REV__nc|ENSG00000134532|P35711-3|SOX5;REV__nc|ENSG00000134532|P35711-4|SOX5;REV__nc|ENSG00000134532|P35711-5|SOX5 13.90604991867851 0.4602628045680013 3 [DG]Y{I|L}M 5 -1 31.375 0.0 0.0 3.0419 0.0 0.0 0.0 449.1574028623488 449.1574028623488 6.937747964297572 0.0 0.0 0.0 0 1.305462187404089 1.154901959985743 0.2614393726401688 0.0 [DG]Y{I|L}M 3.0419 - 314 1 1.356 106903.8 1.0 13176 5788 18956 HBL1_DMSO_200M_050219_1,18966 HBL1_DMSO_200M_050219_1,18966,NSNHMDPFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18967 90.941 68.0 780850.0 25 0 85217.0 23900 LVMFSPQEL 9 81 532.2798600894384 1062.5451672456768 2 532.2803222537041 MULTI CID FTMS 0 0 0 18956 731995.0625 0.7293962237547618 1 -0.0974807739257812 11 Unmodified _LVMFSPQEL_ ENST00000542112.5_1_11:62621512-62623345:-|nuORF 20.453626601364224 0.2830276176381075 3 {NN|[MP]|[D{I|L}]|[EV]}CMK{I|L}VE{I|L} 9 6 + 71.565 0.0 0.0 6.7352 6.7352 80.979 0.0 0.0 0.0 19.366130211356065 55.8783628755652 19.366130211356065 1.7609125905568137 0 0.7742275032520141 1.5228787452803376 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}CMK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}C{I|L}MKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}CM{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}C{I|L}V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{I|L};{[TV]|[{I|L}S]}V[C(Carbamidomethyl (C))M]{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}{[DS]|[MA]|[CV]|TT}MKVE{I|L};[VP]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S]{I|L}VE{I|L};[VP]{M(Oxidation (M))|F}[EC]KVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[NS]MKVE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]MKVE{I|L} 6.7352;6.5695;6.2862;4.8793;4.6746;4.2215;3.9382;3.4892;3.4892;3.2414 -;-;-;-;-;-;-;-;-;- 265 1 1.356 45568.5 1.0 13177 5788 18956 HBL1_DMSO_200M_050219_1,18967 HBL1_DMSO_200M_050219_1,18967,LVMFSPQEL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18968 90.943 60.0 764860.0 25 0 52444.0 + 26013 NLYEEWTQV 9 84 591.2777453301125 1180.5409377270248 2 591.2779418826103 MULTI CID FTMS 0 0 0 18956 685059.625 1.0 0 0.0 12 Unmodified _NLYEEWTQV_ ENSG00000140750|ENST00000289968|ARHGAP17;ENST00000575656.5_1_16:24960717-24971282:-|nuORF;ENST00000576387.1_1_16:24960717-24966004:-|nuORF;nc|ENSG00000140750|Q68EM7-2|ARHGAP17;nc|ENSG00000140750|Q68EM7-3|ARHGAP17;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;nc|ENSG00000140750|Q68EM7-6|ARHGAP17 20.453626601364224 0.2830276176381075 3 {[QV]|[N{I|L}]|[RA]|[KV]}YEEG 6 4 26.655 0.0 0.0 2.2579 0.0 0.0 0.0 472.2188301432936 472.2188301432936 5.740312677277185 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}YEEG 2.2579 - 90 1 1.356 37691.6 1.0 13178 5788 18956 HBL1_DMSO_200M_050219_1,18968 HBL1_DMSO_200M_050219_1,18968,NLYEEWTQV False True NLYEEWTQV 90.942661 591.27794188261 7849567.5 18956.0 nc|ENSG00000140750|Q68EM7-2|ARHGAP17;;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;;nc|ENSG00000140750|Q68EM7-3|ARHGAP17;;ENSG00000140750|ENST00000289968|ARHGAP17;;ENST00000576387.1_1_16:24960717-24966004:-|nuORF;;ENST00000575656.5_1_16:24960717-24971282:-|nuORF;;nc|ENSG00000140750|Q68EM7-6|ARHGAP17 6.046784400939941 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18969 90.946 183.0 660220.0 25 0 80859.0 + 32126 RVPDFILEKI 10 79 615.3666481148396 1228.718743296479 2 615.3664428591728 MULTI CID FTMS 0 0 0 18956 473447.71875 0.4141531982761976 1 -0.0974807739257812 13 Unmodified _RVPDFILEKI_ ENSG00000198826|ENST00000361627|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A 66.68293810318366 0.0190556348240626 3 [RV][DP]{M(Oxidation (M))|F}{I|L}{I|L}EK{I|L} 10 0 + 75.961 0.0 0.0 6.1821 6.1821 80.578 0.0 0.0 0.0 2.693320964897836 14.043162181802202 2.693320964897836 2.693320964897836 0 2.3737125054200234 1.0 0.0 0.3807196863200844 + + [RV][DP]{M(Oxidation (M))|F}{I|L}{I|L}EK{I|L};{[QN]|[E{I|L}]|[KN]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}[EP]EK{I|L};{I|L}[R{M(Oxidation (M))|F}][TP]{I|L}{I|L}EK{I|L};[{I|L}T]VG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}[EP]E{I|L}K;[VS]A{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[EP]{I|L}{I|L}EK{I|L};{[QN]|[E{I|L}]|[KN]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}TR{I|L} 6.1821;5.9629;5.6137;5.3267;5.2021;5.1444;5.1071;5.0624;5.0402;5.0011 +;-;-;-;-;-;-;-;-;- + 1007 1 1.356 95968.4 1.0 13179 5788 18956 HBL1_DMSO_200M_050219_1,18969 HBL1_DMSO_200M_050219_1,18969,RVPDFILEKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18970 90.949 118.0 591680.0 25 0 57462.0 + 17199 KLLDLYRSL 9 85 560.8408216817885 1119.667090430377 2 560.8406860232353 MULTI CID FTMS 0 0 0 18956 350957.15625 0.5277612231795537 2 -0.2043914794921875 14 Unmodified _KLLDLYRSL_ REV__ENSG00000138792|ENST00000265162|ENPEP 17.44264345198275 0.3645313841742926 3 K{I|L}{I|L}DVAV 7 -1 56.006 0.0 0.0 5.002 0.0 0.0 0.0 378.2023714654906 378.2023714654906 38.002669794978274 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.0 K{I|L}{I|L}DVAV 5.002 - 121 + 1 1.356 60531.5 1.0 13180 5788 18956 HBL1_DMSO_200M_050219_1,18970 HBL1_DMSO_200M_050219_1,18970,KLLDLYRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18971 90.951 95.0 656620.0 25 0 40392.0 + 34955 SQLCISSHYI 10 97 575.7841615878182 1149.5537702424365 2 575.7878295779228 MULTI CID FTMS 0 0 0 18956 261395.1875 1.0 0 0.0 15 Unmodified _SQLCISSHYI_ REV__ENST00000392825.7_1_2:154800910-154800988:+|nuORF 13.042465956692816 0.6287021003332052 3 [QA]{M(Oxidation (M))|F}VDASHY{I|L} 10 -1 + 42.108 0.0 0.0 3.663 3.663 74.225 0.0 0.0 0.0 25.43350257770477 7.95880017344075 7.95880017344075 3.52182518111362 0 0.805462187404089 0.0 0.0 0.0 [QA]{M(Oxidation (M))|F}VDASHY{I|L};[QA]{M(Oxidation (M))|F}VWSHY{I|L};[QA]V{M(Oxidation (M))|F}DASHY{I|L};[QA]V{M(Oxidation (M))|F}WSHY{I|L};[QA]{M(Oxidation (M))|F}[TA]AEW{[QV]|[N{I|L}]|[RA]|[KV]};[QA]{M(Oxidation (M))|F}WWW{[QV]|[N{I|L}]|[RA]|[KV]};[QA]{M(Oxidation (M))|F}[PS]TSW{[QV]|[N{I|L}]|[RA]|[KV]};[QA][YR]AEW{[QV]|[N{I|L}]|[RA]|[KV]};[QA]{M(Oxidation (M))|F}[TA]AE{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]};[QA]{M(Oxidation (M))|F}[TA]AD{[CP]|[EA]}{[QV]|[N{I|L}]|[RA]|[KV]} 3.663;3.3566;3.0317;2.7253;2.4317;1.8199;1.7976;1.6904;1.6345;1.522 -;-;-;-;-;-;-;-;-;- 548 + 1 1.356 51826.2 1.0 13181 5788 18956 HBL1_DMSO_200M_050219_1,18971 HBL1_DMSO_200M_050219_1,18971,SQLCISSHYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18972 90.964 773.0 280000.0 25 0 36025.0 + 44440 YMIGSEVGNYL 11 188 623.2945506494267 1244.5745483656533 2 623.2959472537041 MULTI CID FTMS 0 0 0 18956 211644.734375 0.3251605006198214 -3 0.325897216796875 16 Unmodified _YMIGSEVGNYL_ ENSG00000099956|ENST00000644036|SMARCB1;nc|ENSG00000099956|Q12824-2|SMARCB1 74.92900055777586 0.0181202892152222 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NGVYD{I|L} 8 6 62.107 0.0 0.0 4.9902 0.0 0.0 0.0 286.0840673587581 286.0840673587581 36.95972462217041 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.372363747448347 0.3252574989159953 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NGVYD{I|L} 4.9902 - 8710 + 1 1.356 155405.3 1.0 13182 5788 18956 HBL1_DMSO_200M_050219_1,18972 HBL1_DMSO_200M_050219_1,18972,YMIGSEVGNYL True True YMIGSEVGNYL 90.964147 623.295947253704 12143659.0 18956.0 nc|ENSG00000099956|Q12824-2|SMARCB1;;ENSG00000099956|ENST00000644036|SMARCB1 4.881782213846843 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18973 90.978 800.0 239550.0 25 0 11608.0 -1 0 146 1164.5395707415664 3490.5968828249 3 1164.545092761517 MULTI CID FTMS 0 0 0 18956 207308.09375 0.2853581979638223 -6 0.6654281616210938 17 3 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQAQS 14 -1 90.34 0.0 0.0 2.5881 0.0 0.0 1485.7292813618117 362.109805055148 1847.83908641696 0.0 0.0 0.0 0.0 0 1.7302046884880935 0.0 0.2887254899964357 0.7302046884880937 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQAQS 2.5881 - 147254 + 1 1.356 120448.0 0.9900000095367432 13183 5788 18956 HBL1_DMSO_200M_050219_1,18973 HBL1_DMSO_200M_050219_1,18973, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18974 90.992 800.0 361290.0 25 0 23639.0 + 14050 ALLEDLGKASGL 12 204 593.8390585694056 1185.663564205611 2 594.3443481326103 MULTI CID FTMS 0 0 0 18956 174217.28125 0.7259883829159364 -2 0.1669235229492187 18 Unmodified _IALEEVLTWL_ ENST00000448973.6_1_16:684599-685202:-|nuORF;ENST00000456420.6_2_16:684599-686105:-|nuORF;ENSG00000130731|ENST00000301686|METTL26;nc|ENSG00000130731|Q96S19-3|METTL26;nc|ENSG00000130731|Q96S19-5|METTL26 34.10243960390752 0.2198439752719791 3 [{I|L}A]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}DEP 9 6 44.746 0.0 0.0 3.7739 0.0 0.0 0.0 197.137416094536 197.137416094536 8.775385454324308 0.0 0.0 0.0 0 0.25 1.6989700043360187 0.6549471895720984 0.0 [{I|L}A]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}DEP 3.7739 - 4760 1 1.356 211246.5 0.8600000143051147 13184 5788 18956 HBL1_DMSO_200M_050219_1,18974 HBL1_DMSO_200M_050219_1,18974,IALEEVLTWL False False ALLEDLGKASGL 90.991847 594.34434813261 3109026.75 18956.0 ENST00000448973.6_1_16:684599-685202:-|nuORF;;ENST00000456420.6_2_16:684599-686105:-|nuORF;;ENSG00000130731|ENST00000301686|METTL26;;nc|ENSG00000130731|Q96S19-3|METTL26;;nc|ENSG00000130731|Q96S19-5|METTL26 5.58878231048584 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18975 91.006 800.0 210630.0 25 0 11317.0 + 25540 NERYHQRKEWW 11 138 816.3962345248615 0 816.3964721560478 PEAK CID FTMS 0 0 0 18956 146767.84375 0.8620811276471103 -1 0.1170501708984375 19 Unmodified _NERYHQRKEWW_ REV__ENST00000411999.1_1_2:197893450-197893558:-|nuORF 0.9622753412299312 0.4761840153648598 3 {I|L}SA{M(Oxidation (M))|F}{I|L} 5 -1 21.331 0.0 0.0 1.308 0.0 0.0 832.3519040089042 264.0997713678344 1096.4516753767386 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {I|L}SA{M(Oxidation (M))|F}{I|L} 1.308 - 1360 + 1 1.356 120126.5 0.8999999761581421 13185 5788 18956 HBL1_DMSO_200M_050219_1,18975 HBL1_DMSO_200M_050219_1,18975,NERYHQRKEWW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18976 91.021 800.0 103600.0 25 0 14309.0 -1 0 98 1105.4718609999732 2208.9291690667465 2 1105.470507800579 MULTI CID FTMS 0 0 0 18956 137687.03125 1.0 0 0.0 20 3 N{I|L}V 3 -1 16.198 0.0 0.0 0.73329 0.0 0.0 876.184126197409 1003.465884075272 1879.650010272681 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N{I|L}V 0.73329 - 339 + 1 1.356 66122.7 0.9900000095367432 13186 5788 18956 HBL1_DMSO_200M_050219_1,18976 HBL1_DMSO_200M_050219_1,18976, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18978 91.031 421.0 471220.0 25 0 33830.0 -1 0 151 1052.5186730649607 3154.534189795082 3 1053.188159167767 MULTI CID FTMS 0 0 0 18977 549079.5625 0.8837353290411051 1 -0.1069107055664062 1 3 MN[EP]{I|L}VNM{I|L} 9 -1 64.759 0.0 0.0 2.0529 0.0 0.0 2095.031503869842 0.0 2095.031503869842 0.0 35.501896823007826 0.0 0.0 0 0.5 0.0 0.0 1.9916440611282624 MN[EP]{I|L}VNM{I|L} 2.0529 - 4942 1 1.356 126571.6 1.0 13187 5789 18977 HBL1_DMSO_200M_050219_1,18978 HBL1_DMSO_200M_050219_1,18978, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18979 91.036 276.0 313530.0 25 0 28033.0 + 28788 PYKEIIEEL 9 120 567.3082365767435 1132.601920220287 2 567.3105956912041 MULTI CID FTMS 0 0 0 18977 312877.625 0.6524400054452087 -5 0.5304031372070312 2 Unmodified _PYKEIIEEL_ REV__ENSG00000186377|ENST00000371901|CYP4X1;REV__nc|ENSG00000186377|Q8N118-2|CYP4X1;REV__nc|ENSG00000186377|Q8N118-3|CYP4X1 31.26834338654808 0.1333407332142048 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}K{I|L}KNE{I|L} 9 -1 + 66.578 0.0 0.0 5.8783 5.8783 80.877 0.0 0.0 0.0 3.221740651475642 12.047509540478032 3.221740651475642 3.221740651475642 0 1.524227503252014 0.0 0.2742275032520141 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}K{I|L}KNE{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}KK{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}KKNE{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}KKKNE{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}KK{I|L}KNE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}K{I|L}KGGE{I|L};[EP]YK{I|L}KNE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}K{I|L}{I|L}EE{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}K{I|L}QEE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}KKGGE{I|L} 5.8783;5.5939;5.4571;5.4182;5.3715;5.0653;4.9099;4.8625;4.8146;4.6441 -;-;-;-;-;-;-;-;-;- 867 1 1.356 69414.4 1.0 13188 5789 18977 HBL1_DMSO_200M_050219_1,18979 HBL1_DMSO_200M_050219_1,18979,PYKEIIEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18980 91.047 659.0 379560.0 25 0 31337.0 + 14652 IIMLEALERV 10 161 601.8441916791113 1201.6738304250223 2 601.8447143435478 MULTI CID FTMS 0 0 0 18977 302872.46875 0.4605871975078279 -2 0.2145309448242187 3 Oxidation (M) _IIM(Oxidation (M))LEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 71.70789743142352 0.0188816056000227 3 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}ERV 10 0 + 108.44 0.0 0.0 9.0238 9.0238 91.368 0.0 0.0 0.0 35.02697515943353 13.267066269197684 13.267066269197684 6.276362525516532 0 1.5 2.0 1.0 0.5994850021680094 + + {I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}ERV;{I|L}{I|L}YPEA{I|L}ERV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}[RD]{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EV[DV]RV;{I|L}{I|L}YPEA{I|L}[RD]{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}VE[DV]RV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}V[DV]ERV;{I|L}{I|L}YPEV[DV]RV;{I|L}{I|L}{M(Oxidation (M))|F}V[DV]{I|L}ERV;{I|L}{I|L}YPVE[DV]RV 9.0238;8.5015;7.9198;7.5521;7.3975;7.3015;7.2554;7.0298;6.9836;6.7792 +;-;-;-;-;-;-;-;-;- + 7264 + 1 1.356 180378.0 1.0 13189 5789 18977 HBL1_DMSO_200M_050219_1,18980 HBL1_DMSO_200M_050219_1,18980,IIMLEALERV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18981 91.06 730.0 164850.0 25 0 5909.6 -1 0 131 1159.287336445986 4633.1202399175445 4 1160.036059558392 MULTI CID FTMS 0 0 0 18977 224090.453125 0.884363487250321 -1 0.0974807739257812 4 3 VQY{M(Oxidation (M))|F}ANQQAE 10 -1 58.098 0.0 0.0 1.254 0.0 0.0 3003.4063915516203 448.1600741022094 3451.5664656538297 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.174742501084005 VQY{M(Oxidation (M))|F}ANQQAE 1.254 - 4295 + 1 1.356 74920.3 1.0 13190 5789 18977 HBL1_DMSO_200M_050219_1,18981 HBL1_DMSO_200M_050219_1,18981, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18982 91.069 512.0 497720.0 25 0 36113.0 -1 PWRLGRLLLLM 11 172 461.9489857904729 1382.8251279716187 3 462.2887451052666 MULTI CID FTMS 0 0 0 18977 219399.96875 0.3588133175936813 6 -0.635406494140625 5 Oxidation (M) _PWRLGRLLLLM(Oxidation (M))_ ENSG00000108582|ENST00000225719|CPD 3.072263186857199 0.860652797555031 3 [WP]A{I|L}{I|L} 5 -1 27.905 0.0 0.0 2.018 0.0 0.0 0.0 799.4656226455596 799.4656226455596 4.73252255165264 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [WP]A{I|L}{I|L} 2.018 - 430 1 1.356 196591.2 1.0 13191 5789 18977 HBL1_DMSO_200M_050219_1,18982 HBL1_DMSO_200M_050219_1,18982,PWRLGRLLLLM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18983 91.076 387.0 426750.0 25 0 83498.0 + 18777 LAPEDEDTV 9 180 494.725215054231 987.435877175262 2 494.7253600955009 MULTI CID FTMS 0 0 0 18977 200581.6875 1.0 0 0.0 6 Unmodified _LAPEDEDTV_ REV__ENSG00000172530|ENST00000682872|BANP;REV__ENST00000485772.5_1_16:88008779-88037477:+|nuORF;REV__nc|ENSG00000172530|Q8N9N5-2|BANP;REV__nc|ENSG00000172530|Q8N9N5-4|BANP;REV__nc|ENSG00000172530|Q8N9N5-5|BANP;REV__nc|ENSG00000172530|Q8N9N5-6|BANP;REV__nc|ENSG00000172530|Q8N9N5-7|BANP;REV__nc|ENSG00000172530|Q8N9N5|BANP 18.13498045792455 0.3457906370836843 3 [{I|L}A]PNYS 6 -1 20.239 0.0 0.0 2.0496 0.0 0.0 0.0 339.09637457199955 339.09637457199955 1.6554624884906843 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3494850021680094 0.0 [{I|L}A]PNYS 2.0496 - 1784 1 1.356 126100.4 1.0 13192 5789 18977 HBL1_DMSO_200M_050219_1,18983 HBL1_DMSO_200M_050219_1,18983,LAPEDEDTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18984 91.089 770.0 368510.0 25 0 18036.0 -1 0 177 849.0661192256906 2544.176528277272 3 849.3983642458916 MULTI CID FTMS 0 0 0 18977 218747.15625 0.4773189410255235 -2 0.2145309448242187 7 3 [YQ]{I|L}HQN{I|L}GY{I|L}V{I|L} 12 -1 77.438 0.0 0.0 3.0437 0.0 0.0 0.0 1099.3539522760375 1099.3539522760375 21.613138810894057 0.0 0.0 0.0 0 0.9247425010840048 1.154901959985743 0.0 0.8494850021680094 [YQ]{I|L}HQN{I|L}GY{I|L}V{I|L} 3.0437 - 13779 + 1 1.356 195501.3 1.0 13193 5789 18977 HBL1_DMSO_200M_050219_1,18984 HBL1_DMSO_200M_050219_1,18984, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18985 91.097 361.0 386020.0 25 0 46320.0 + 15042 ILVSQLEQL 9 171 521.8125157996582 1041.6104786661165 2 521.8120605349541 MULTI CID FTMS 0 0 0 18977 180712.78125 0.4738573764281642 5 -0.515869140625 8 Unmodified _ILVSQLEQL_ ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2 20.453626601364224 0.2830276176381075 3 {[VA]|[{I|L}G]}AS{I|L}V{I|L}K 8 6 23.37 0.0 0.0 2.2436 0.0 0.0 0.0 257.0689496956663 257.0689496956663 -2.2134030500787816 0.0 -2.2134030500787816 0.0 0 0.0 1.2218487496163564 0.3807196863200844 0.0 {[VA]|[{I|L}G]}AS{I|L}V{I|L}K 2.2436 - 1825 1 1.356 112277.8 1.0 13194 5789 18977 HBL1_DMSO_200M_050219_1,18985 HBL1_DMSO_200M_050219_1,18985,ILVSQLEQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18986 91.1 162.0 354630.0 25 0 34649.0 28507 PTLALNSKSRG 11 99 572.325750660838 1142.636948388476 2 572.8274413943291 MULTI CID FTMS 0 0 0 18977 145913.84375 0.2676382114054144 -3 0.264404296875 9 Unmodified _PTLALNSKSRG_ ENST00000485887.1_1_2:25043436-25046221:-|nuORF 17.11289562659939 0.6791789249425932 3 [VP]SV{I|L}SN{I|L} 8 8 54.378 0.0 0.0 4.759 0.0 0.0 0.0 330.1488505578473 330.1488505578473 39.685559738766045 0.0 0.0 0.0 0 0.0 0.7958800173440752 1.6989700043360187 0.3054621874040891 [VP]SV{I|L}SN{I|L} 4.759 - 801 1 1.356 48373.1 1.0 13195 5789 18977 HBL1_DMSO_200M_050219_1,18986 HBL1_DMSO_200M_050219_1,18986,PTLALNSKSRG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 18987 91.114 800.0 98875.0 25 0 20048.0 -1 0 120 740.0047532962235 2216.9924304888705 3 740.3387328982353 MULTI CID FTMS 0 0 0 18977 131529.75 0.8362366181243887 -1 0.0974807739257812 10 3 [QT]M[YG]AQQNA{M(Oxidation (M))|F}YQV 14 -1 67.845 0.0 0.0 3.0602 0.0 0.0 0.0 584.2551383923281 584.2551383923281 44.318926186896434 0.0 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.3807196863200844 [QT]M[YG]AQQNA{M(Oxidation (M))|F}YQV 3.0602 - 4389 1 1.356 65276.8 0.7599999904632568 13196 5789 18977 HBL1_DMSO_200M_050219_1,18987 HBL1_DMSO_200M_050219_1,18987, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18988 91.128 800.0 158440.0 25 0 16085.0 -1 0 132 1092.5271588897317 2183.039764846264 2 1093.536303699017 MULTI CID FTMS 0 0 0 18977 123288.765625 0.8397962303855941 -7 0.762908935546875 11 3 {[QS]|[NT]}AAPPPPP{I|L}M 11 -1 65.681 0.0 0.0 3.0087 0.0 0.0 0.0 1093.4830028427011 1093.4830028427011 44.54465406254822 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.2742275032520141 1.0 {[QS]|[NT]}AAPPPPP{I|L}M 3.0087 - 3900 1 1.356 82956.0 0.7099999785423279 13197 5789 18977 HBL1_DMSO_200M_050219_1,18988 HBL1_DMSO_200M_050219_1,18988, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 18990 91.132 26.0 3467100.0 25 0 325250.0 + 22621 LPYLVPKL 8 80 471.8050769862165 941.595601039233 2 471.8049804568291 MULTI CID FTMS 0 0 0 18989 2347614.5 1.0 0 0.0 1 Unmodified _LPYLVPKL_ ENSG00000089154|ENST00000300648|GCN1 63.562846038646086 0.116059504757595 3 {I|L}PY{I|L}VPK{I|L} 8 0 + 77.358 0.0 0.0 8.2156 8.2156 94.948 0.0 0.0 0.0 31.638568026386693 11.760912590556812 11.760912590556812 11.760912590556812 0 1.524227503252014 1.5228787452803376 0.0 0.0 + + {I|L}PY{I|L}VPK{I|L};{I|L}PY{I|L}V{I|L}[KP];{I|L}{I|L}{M(Oxidation (M))|F}{I|L}VPK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}V{I|L}[KP];{I|L}{I|L}{[SA]|[TG]}{I|L}{[QG]|[NA]}K{I|L};{I|L}{I|L}{[SA]|[TG]}V[QA]K{I|L};{I|L}{I|L}{[SA]|[TG]}V[KS][KP] 8.2156;6.9666;6.5725;5.3235;1.7145;1.4789;0.22988 +;-;-;-;-;-;- + 251 + 1 1.384 73994.9 1.0 13198 5790 18989 HBL1_DMSO_200M_050219_1,18990 HBL1_DMSO_200M_050219_1,18990,LPYLVPKL True True LPYLVPKL 91.132418 471.804980456829 93251874.0 18989.0 ENSG00000089154|ENST00000300648|GCN1 5.391251722971599 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18991 91.134 26.0 3214700.0 25 0 395400.0 + 22389 LPSSVLHII 9 82 489.8031366181117 977.5917203030232 2 489.8029968142509 MULTI CID FTMS 0 0 0 18989 2485702.75 1.0 0 0.0 2 Unmodified _LPSSVLHII_ ENSG00000000460|ENST00000359326|C1orf112 92.8221339359638 0.0138398038803217 3 {I|L}PSSV{I|L}H{I|L}{I|L} 9 0 + 90.479 0.0 0.0 9.2553 9.2553 96.94 0.0 0.0 0.0 52.18580793540782 11.082268588648247 11.082268588648247 15.67532531436136 0 2.524227503252014 2.0 0.4247425010840047 0.0 + + {I|L}PSSV{I|L}H{I|L}{I|L};[{I|L}P]SSV{I|L}H{I|L}{I|L};[{I|L}P]SSVH{I|L}{I|L}{I|L};[PS]{I|L}SV{I|L}H{I|L}{I|L};[PS]{I|L}SVH{I|L}{I|L}{I|L};[H{I|L}]VSSP{I|L}{I|L}{I|L};{I|L}PS[KP]NP{I|L}{I|L};[PS]SV{I|L}{I|L}H{I|L}{I|L};[PS]SV{I|L}H{I|L}{I|L}{I|L};[H{I|L}]VSS{I|L}P{I|L}{I|L} 9.2553;7.6518;7.5429;6.3222;6.2133;6.1944;6.1625;6.0913;5.9824;5.8865 +;+;-;-;-;-;-;-;-;- + 911 + 1 1.384 68727.1 1.0 13199 5790 18989 HBL1_DMSO_200M_050219_1,18991 HBL1_DMSO_200M_050219_1,18991,LPSSVLHII True True LPSSVLHII 91.133598 489.802996814251 58003632.0 18989.0 ENSG00000000460|ENST00000359326|C1orf112 4.550868352254232 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18992 91.135 28.0 2892200.0 25 0 318130.0 + 29502 QLLEKVIEL 9 120 542.8339757946347 1083.6533986560694 2 542.8347045779228 MULTI CID FTMS 0 0 0 18989 1729377.625 0.5265526371436327 -2 0.2043914794921875 3 Unmodified _QLLEKVIEL_ ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;nc|ENSG00000093144|Q9NTX5-4|ECHDC1;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1 49.93300154707207 0.0405168250806675 3 [Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}E 6 4 42.787 0.0 0.0 3.9484 0.0 0.0 0.0 337.2247408502563 337.2247408502563 18.37995990199484 0.0 0.0 0.0 0 0.5866968715561641 1.5228787452803376 0.75 0.0 [Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}E 3.9484 - 511 + 1 1.384 66881.8 1.0 13200 5790 18989 HBL1_DMSO_200M_050219_1,18992 HBL1_DMSO_200M_050219_1,18992,QLLEKVIEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18993 91.136 28.0 2334000.0 25 0 531860.0 + 30987 RLDEAFDFV 9 58 556.2744132198225 1110.5342735064448 2 556.2746459841728 MULTI CID FTMS 0 0 0 18989 1632472.5 0.8985326288425302 1 -0.0661239624023437 4 Unmodified _RLDEAFDFV_ ENSG00000158050|ENST00000288943|DUSP2;ENST00000488952.1_1_2:96809564-96810280:-|nuORF 23.78978130925829 0.2284941198415988 3 A{[HG]|PP}EA{M(Oxidation (M))|F}D{M(Oxidation (M))|F}V 9 3 53.862 0.0 0.0 4.8501 0.0 0.0 119.0739765851578 0.0 119.0739765851578 0.0 36.41441272380455 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 A{[HG]|PP}EA{M(Oxidation (M))|F}D{M(Oxidation (M))|F}V 4.8501 - 70 1 1.384 56409.0 1.0 13201 5790 18989 HBL1_DMSO_200M_050219_1,18993 HBL1_DMSO_200M_050219_1,18993,RLDEAFDFV False True RLDEAFDFV 91.135956 556.274645984173 37593776.0 18989.0 ENST00000488952.1_1_2:96809564-96810280:-|nuORF;;ENSG00000158050|ENST00000288943|DUSP2 7.741114616394043 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18994 91.137 45.0 1578100.0 25 0 344520.0 + 37 AAAPQLLIV 9 88 448.2842274182863 894.5539019033725 2 448.2843810915947 MULTI CID FTMS 0 0 0 18989 1296007.875 0.3386330543176791 -2 0.2043914794921875 5 Unmodified _AAAPQLLIV_ ENSG00000130303|ENST00000252593|BST2;nc|ENSG00000130303|Q10589-2|BST2 46.92087301778293 0.0471210510596396 3 [QP]{I|L}{I|L}AAA{I|L}V 9 6 + 55.961 0.0 0.0 6.2558 6.2558 80.929 0.0 0.0 0.0 11.875950879656225 10.330145895351848 10.330145895351848 2.768024924119672 0 0.7429928190999391 0.8860566476931632 0.0 0.3807196863200844 [QP]{I|L}{I|L}AAA{I|L}V;[QP]{I|L}AAA{I|L}{I|L}V;[QP]{I|L}A{I|L}AA{I|L}V;[QP]AAA{I|L}{I|L}{I|L}V;[QP]A{I|L}AA{I|L}{I|L}V;[QP]{I|L}AA{I|L}A{I|L}V;[QP]AA{I|L}A{I|L}{I|L}V;[QP]A{I|L}{I|L}AA{I|L}V;AA[VP]{I|L}AAA{I|L}V;[QP]{I|L}{[NV]|[RG]}{I|L}{I|L}V 6.2558;5.9464;5.5828;5.5527;5.413;5.2462;5.2161;5.0494;4.9282;4.8087 -;-;-;-;-;-;-;-;-;- 564 1 1.384 60307.8 1.0 13202 5790 18989 HBL1_DMSO_200M_050219_1,18994 HBL1_DMSO_200M_050219_1,18994,AAAPQLLIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18995 91.139 93.0 816090.0 25 0 59445.0 + 35431 STLHLVLRL 9 77 351.2258024463099 1050.6555779391297 3 351.2256347537041 MULTI CID FTMS 0 0 0 18989 772029.625 0.0191745795613183 10 -1.0864639282226562 6 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 36.12702656103203 0.0967173616627612 3 {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}] 9 0 + 47.923 0.0 0.0 4.5613 4.5613 79.6 0.0 0.0 0.0 23.486446888048107 8.89506772603255 8.89506772603255 6.064921830680703 0 0.5796896906561032 0.0 0.0 0.3252574989159953 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}];{[MG]|[TS]}{I|L}{I|L}HV{I|L}[R{I|L}];{[MG]|[TS]}{I|L}H{I|L}{I|L}V[R{I|L}];{[MG]|[TS]}{I|L}{I|L}H{I|L}V[R{I|L}] 4.5613;3.984;3.8207;3.2434 +;-;-;- + 109 + 1 1.384 66380.5 1.0 13203 5790 18989 HBL1_DMSO_200M_050219_1,18995 HBL1_DMSO_200M_050219_1,18995,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18996 91.141 89.0 694720.0 25 0 94488.0 + 17933 KQVSDLISVL 10 102 551.330261306733 1100.6459696802658 2 551.3296996951103 MULTI CID FTMS 0 0 0 18989 587804.9375 0.2809840177939116 2 -0.1979904174804687 7 Unmodified _KQVSDLISVL_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62496043-62497015:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5 51.41523569358685 0.0718446036348414 3 [VS]E{I|L}E{I|L}{I|L}SV{I|L} 10 5 + 94.162 0.0 0.0 8.5551 8.5551 96.25 0.0 0.0 0.0 24.726890629795548 15.026975159433531 15.026975159433531 15.740312677277188 0 0.75 2.0 1.6307196863200843 0.0 [VS]E{I|L}E{I|L}{I|L}SV{I|L};[VS]D[KQ]{I|L}{I|L}SV{I|L};[VS][KQ]D{I|L}{I|L}SV{I|L};[VS]EV[KQ]{I|L}SV{I|L};{[TV]|[{I|L}S]}D{I|L}E{I|L}{I|L}SV{I|L};[VS]D{I|L}[KQ]{I|L}SV{I|L};[TA]E[KQ]{I|L}{I|L}SV{I|L};{[TV]|[{I|L}S]}DV[KQ]{I|L}SV{I|L};[TA]E{I|L}[KQ]{I|L}SV{I|L} 8.5551;7.125;6.8515;6.6656;6.3086;6.2321;5.2044;4.419;4.3115 -;-;-;-;-;-;-;-;- 323 1 1.384 55889.4 1.0 13204 5790 18989 HBL1_DMSO_200M_050219_1,18996 HBL1_DMSO_200M_050219_1,18996,KQVSDLISVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18997 91.143 76.0 862380.0 25 0 80068.0 + 7485 EGVLFALSV 9 98 467.7658256276733 933.5170983221466 2 467.7655517458916 MULTI CID FTMS 0 0 0 18989 555454.75 0.6162270202198975 2 -0.1979904174804687 8 Unmodified _EGVLFALSV_ REV__ENST00000407071.6_2_1:245318369-245318450:+|nuORF 23.1484247019978 0.2366544122328345 3 V[HV]A{M(Oxidation (M))|F}{I|L}S 7 -1 25.168 0.0 0.0 2.6961 0.0 0.0 0.0 177.0676210992797 177.0676210992797 1.0387196432176182 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 V[HV]A{M(Oxidation (M))|F}{I|L}S 2.6961 - 418 + 1 1.384 54666.6 1.0 13205 5790 18989 HBL1_DMSO_200M_050219_1,18997 HBL1_DMSO_200M_050219_1,18997,EGVLFALSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 18998 91.145 64.0 999360.0 25 0 157180.0 + -1 YPYVGILHV 9 78 530.6537418499129 1588.9393961499386 3 530.6538574099541 MULTI CID FTMS 0 0 0 18989 548654.3125 0.1915960860438285 -2 0.2043914794921875 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LRRRPRVYYRI_ ENSG00000161904|ENST00000293760|LEMD2;nc|ENSG00000161904|Q8NC56-2|LEMD2 0.0948413911109767 0.8747004676205551 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YV 4 -1 27.167 0.0 0.0 1.7098 0.0 0.0 0.0 1063.6565952068322 1063.6565952068322 4.771212547196626 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YV 1.7098 - 121 1 1.384 60410.7 1.0 13206 5790 18989 HBL1_DMSO_200M_050219_1,18998 HBL1_DMSO_200M_050219_1,18998,LRRRPRVYYRI False False YPYVGILHV 91.144506 530.653857409954 17498980.0 18989.0 ENSG00000161904|ENST00000293760|LEMD2;;nc|ENSG00000161904|Q8NC56-2|LEMD2 8.209252516428629 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 18999 91.147 134.0 434500.0 25 0 72088.0 + 32043 RVLDFDPMAV 10 73 581.7991914244351 1161.58382991567 2 581.7991821169853 MULTI CID FTMS 0 0 0 18989 422954.65625 0.4354909154887159 2 -0.1979904174804687 10 Unmodified _RVLDFDPMAV_ ENSG00000140451|ENST00000559239|PIF1;nc|ENSG00000140451|Q9H611-3|PIF1;nc|ENSG00000140451|Q9H611-4|PIF1 19.143941131932102 0.5263252730532664 3 {M(Oxidation (M))|F}DPMAV 6 4 55.394 0.0 0.0 4.7688 0.0 0.0 483.2819386212906 0.0 483.2819386212906 0.0 40.789719040763046 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 + {M(Oxidation (M))|F}DPMAV 4.7688 + + 69 1 1.384 51297.8 1.0 13207 5790 18989 HBL1_DMSO_200M_050219_1,18999 HBL1_DMSO_200M_050219_1,18999,RVLDFDPMAV False True RVLDFDPMAV 91.147233 581.799182116985 24374856.0 18989.0 nc|ENSG00000140451|Q9H611-3|PIF1;;ENSG00000140451|ENST00000559239|PIF1;;nc|ENSG00000140451|Q9H611-4|PIF1 7.286366462707519 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19000 91.15 115.0 571030.0 25 0 97628.0 + -1 MLCEPAYWFV 10 93 666.2934485303851 1330.5723441275702 2 666.2941161990166 MULTI CID FTMS 0 0 0 18989 409078.0625 0.5488582672939541 -2 0.2043914794921875 11 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LC(Carbamidomethyl (C))EPAYWFV_ REV__ENSG00000162434|ENST00000342505|JAK1 11.640296217721598 0.652229146672156 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L} 7 -1 56.629 0.0 0.0 4.256 0.0 0.0 0.0 483.1364129309981 483.1364129309981 36.68076008422666 0.0 0.0 0.0 0 0.8252574989159953 1.2218487496163564 0.0 1.1421590589602533 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L} 4.256 - 212 1 1.384 53217.7 1.0 13208 5790 18989 HBL1_DMSO_200M_050219_1,19000 HBL1_DMSO_200M_050219_1,19000,MLCEPAYWFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19001 91.154 212.0 637450.0 25 0 36238.0 -1 0 122 782.3614610059393 2344.062553618018 3 782.6951782107353 MULTI CID FTMS 0 0 0 18989 372818.9375 0.4166731919891439 -2 0.2043914794921875 12 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 69.542 0.0 0.0 2.9667 0.0 0.0 0.0 1303.446569589893 1303.446569589893 21.29406212087669 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.5451140161145328 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.9667 - 5751 1 1.384 103719.7 1.0 13209 5790 18989 HBL1_DMSO_200M_050219_1,19001 HBL1_DMSO_200M_050219_1,19001, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19002 91.156 129.0 589500.0 25 0 26479.0 + 34373 SLTLCLHYLLL 11 102 644.8718620070698 1287.7291710809395 2 644.8711425662041 MULTI CID FTMS 0 0 0 18989 329196.96875 0.1141088736757728 -2 0.2043914794921875 13 Unmodified _SLTLCLHYLLL_ REV__ENST00000360105.8_1_19:13209449-13209578:+|nuORF 49.93300154707207 0.1180010809391383 3 {[DS]|[MA]|[CV]|TT}VED{I|L}GSK{I|L}{I|L}{I|L} 12 -1 + 100.85 0.0 0.0 7.8314 7.8314 89.01 0.0 0.0 0.0 5.484550065040281 16.611814434466197 5.484550065040281 5.484550065040281 0 3.723197507588033 0.0 2.979339555460717 0.0 {[DS]|[MA]|[CV]|TT}VED{I|L}GSK{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}TED{I|L}GSK{I|L}{I|L}{I|L};[VG]HHD{I|L}GSK{I|L}{I|L}{I|L};{[DS]|[MA]|[CV]|TT}VEWWK{I|L}{I|L}{I|L};[VG][KT]{I|L}DE{[MG]|[TS]}{I|L}{I|L}{I|L};[VG][KT]{I|L}DEV{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[TV]|[{I|L}S]}TEWWK{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WM]{I|L}GSK{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[KG]{I|L}DE{[MG]|[TS]}{I|L}{I|L}{I|L};[VG][KT]{I|L}DE{I|L}{[MG]|[TS]}{I|L}{I|L} 7.8314;7.4055;6.2936;6.2003;6.161;5.9029;5.7744;5.5901;5.5826;5.3978 -;-;-;-;-;-;-;-;-;- 3570 1 1.384 63125.7 1.0 13210 5790 18989 HBL1_DMSO_200M_050219_1,19002 HBL1_DMSO_200M_050219_1,19002,SLTLCLHYLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19003 91.16 178.0 348540.0 25 0 49848.0 18699 LAIWEASL 8 91 451.75254133747273 901.4905297417456 2 451.7527343630791 MULTI CID FTMS 0 0 0 18989 305390.5 0.0130890592033906 59 -6.5698089599609375 14 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 20.871210003555333 0.6025813472596342 3 [{I|L}A][WE]S 5 3 30.954 0.0 0.0 3.4337 0.0 0.0 0.0 312.19222586895177 312.19222586895177 11.8692447996815 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A][WE]S 3.4337 - 156 1 1.384 52835.8 1.0 13211 5790 18989 HBL1_DMSO_200M_050219_1,19003 HBL1_DMSO_200M_050219_1,19003,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19004 91.162 115.0 533390.0 25 0 42948.0 + 27232 PGMPPGIPPLM 11 92 553.7913493282846 0 553.7911254763603 PEAK CID FTMS 0 0 0 18989 303040.28125 0.4994647022842322 6 -0.637298583984375 15 Unmodified _PGMPPGIPPLM_ ENSG00000010244|ENST00000394670|ZNF207;ENST00000577324.1_1_17:30677304-30687987:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207 28.486842064014134 0.2464735685584453 3 PPP{I|L} 4 7 23.136 0.0 0.0 2.0927 0.0 0.0 552.2656077368441 146.0282381647094 698.2938459015535 0.0 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 PPP{I|L} 2.0927 - 118 + 1 1.384 54664.3 1.0 13212 5790 18989 HBL1_DMSO_200M_050219_1,19004 HBL1_DMSO_200M_050219_1,19004,PGMPPGIPPLM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19005 91.167 263.0 487760.0 25 0 154440.0 -1 0 97 651.3066165413575 2601.1973602990297 4 651.5586425662041 MULTI CID FTMS 0 0 0 18989 288038.96875 0.4702384821188152 2 -0.1979904174804687 16 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 39.105 0.0 0.0 1.5034 0.0 0.0 0.0 1659.6500212156334 1659.6500212156334 21.033219341117185 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.5034 - 512 1 1.384 101909.6 1.0 13213 5790 18989 HBL1_DMSO_200M_050219_1,19005 HBL1_DMSO_200M_050219_1,19005, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19006 91.179 673.0 337460.0 25 0 13028.0 -1 0 131 943.9720991859338 1885.929645438668 2 944.4742919802666 MULTI CID FTMS 0 0 0 18989 264771.28125 0.7849284542228573 2 -0.1979904174804687 17 3 [NP]D{I|L}{I|L}TR[YC(Carbamidomethyl (C))]NDP 12 -1 59.614 0.0 0.0 3.161 0.0 0.0 0.0 424.24033750185407 424.24033750185407 28.48692232278317 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.2059771852360797 0.2396518287104437 [NP]D{I|L}{I|L}TR[YC(Carbamidomethyl (C))]NDP 3.161 - 5345 1 1.384 147536.0 1.0 13214 5790 18989 HBL1_DMSO_200M_050219_1,19006 HBL1_DMSO_200M_050219_1,19006, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19007 91.181 81.0 849950.0 25 0 182420.0 13645 HPSPPPPLL 9 94 477.77346107124447 953.532369209289 2 477.7722961306572 MULTI CID FTMS 0 0 0 18989 277145.15625 0.6857333530966055 2 -0.1979904174804687 18 Unmodified _HPSPPPPLL_ ENST00000505761.2_1_11:60784901-60785045:+|nuORF 23.1484247019978 0.2366544122328345 3 [{I|L}A]T[HC]A{I|L}{I|L}{I|L} 9 7 + 35.837 0.0 0.0 3.7583 3.7583 73.985 0.0 0.0 0.0 8.185137090576127 4.744937880268434 4.744937880268434 3.133345013315271 0 0.3494850021680094 1.6989700043360187 0.0 0.0 [{I|L}A]T[HC]A{I|L}{I|L}{I|L};[{I|L}A]G[HV][MT]{I|L}{I|L};[{I|L}A]G[HV]{M(Oxidation (M))|F}VV{I|L};{[VA]|[{I|L}G]}A[HV][MT]{I|L}{I|L};[{I|L}A]T[HC]VVV{I|L};{[VA]|[{I|L}G]}{[NV]|[RG]}YY{I|L}{I|L};{[VA]|[{I|L}G]}A[HV]{M(Oxidation (M))|F}VV{I|L};[Q{I|L}][HV][MT]{I|L}{I|L};[Q{I|L}][HV]{M(Oxidation (M))|F}VV{I|L} 3.7583;3.4297;3.0632;2.5772;2.2414;2.2264;2.2107;1.4689;1.1024 -;-;-;-;-;-;-;-;- 329 1 1.384 58329.9 1.0 13215 5790 18989 HBL1_DMSO_200M_050219_1,19007 HBL1_DMSO_200M_050219_1,19007,HPSPPPPLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19008 91.187 322.0 473260.0 25 0 48485.0 + 1711 ALPLSVAPLI 10 151 497.3206636023255 992.6267742714508 2 497.3205444216728 MULTI CID FTMS 0 0 0 18989 224442.984375 0.6612120156466449 2 -0.1979904174804687 19 Unmodified _ALPLSVAPLI_ ENSG00000204687|ENST00000377127|MAS1L 32.30548876998284 0.2428506522065767 3 [{I|L}A]TGP[{I|L}V]P{I|L}{I|L} 10 4 + 45.053 0.0 0.0 4.5388 4.5388 72.218 0.0 0.0 0.0 0.8163370842417805 11.575221787320515 0.8163370842417805 0.8163370842417805 0 1.492992819099939 1.6989700043360187 0.0 0.0 [{I|L}A]TGP[{I|L}V]P{I|L}{I|L};[{I|L}P]KE{I|L}AP{I|L}{I|L};[{I|L}P]KEP{I|L}A{I|L}{I|L};[KP]E{I|L}{I|L}AP{I|L}{I|L};[{I|L}P][SG]{I|L}{I|L}AP{I|L}{I|L};[{I|L}P]KE{I|L}PA{I|L}{I|L};[KP]{I|L}E{I|L}AP{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}A{I|L}{I|L};[KP]E{I|L}P{I|L}A{I|L}{I|L};[KP]{I|L}EP{I|L}A{I|L}{I|L} 4.5388;4.4566;3.904;3.5301;3.4531;3.2975;3.2539;3.2526;2.9776;2.7013 -;-;-;-;-;-;-;-;-;- 1913 1 1.384 118030.1 1.0 13216 5790 18989 HBL1_DMSO_200M_050219_1,19008 HBL1_DMSO_200M_050219_1,19008,ALPLSVAPLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19009 91.194 425.0 354980.0 25 0 65863.0 + 41540 VPPAALISI 9 143 440.7789055530888 879.5432581729776 2 440.7789794802666 MULTI CID FTMS 0 0 0 18989 199302.328125 0.3767541850617907 6 -0.637298583984375 20 Unmodified _VPPAALISI_ ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1XR1-TP73|1|fusion;TBL1XR1-TP73|2|fusion;TBL1XR1-TP73|3|fusion;TBL1XR1-TP73|4|fusion;TBL1XR1-TP73|5|fusion;TBL1XR1-TP73|6|fusion 34.18733598223924 0.1073653526364521 3 [PA]PA{I|L}V{I|L}S{I|L} 9 3 + 33.168 0.0 0.0 3.7711 3.7711 73.267 0.0 0.0 0.0 4.09521066247104 7.140520390638528 4.09521066247104 3.010299956639805 0 0.8182503180159344 0.4436974992327127 0.0 0.0 [PA]PA{I|L}V{I|L}S{I|L};[PA]PA{I|L}{I|L}VS{I|L};[{I|L}P]AAPV{I|L}S{I|L};[PA]AP{I|L}V{I|L}S{I|L};[VP][VG]PV{I|L}S{I|L};[PA]PAV{I|L}{I|L}S{I|L};[{I|L}P]AAP{I|L}VS{I|L};[PA]AP{I|L}{I|L}VS{I|L};[PA]{I|L}APV{I|L}S{I|L};[VP][VG]P{I|L}VS{I|L} 3.7711;3.4288;3.285;3.2286;3.1041;2.9764;2.9427;2.8864;2.8864;2.7619 -;-;-;-;-;-;-;-;-;- 745 1 1.384 122299.8 1.0 13217 5790 18989 HBL1_DMSO_200M_050219_1,19009 HBL1_DMSO_200M_050219_1,19009,VPPAALISI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19011 91.199 7.3 7309400.0 25 0 1227300.0 + 35754 SVIEQIVYV 9 80 525.2979427186651 1048.5813325041302 2 525.2980834841728 MULTI CID FTMS 0 0 0 19010 8535454.0 1.0 0 0.0 1 Unmodified _SVIEQIVYV_ ENSG00000077150|ENST00000661543|NFKB2;nc|ENSG00000077150|Q00653-4|NFKB2 54.773552608820026 0.0299037012502309 3 [VS]{I|L}EQ{I|L} 6 3 52.981 0.0 0.0 5.0527 0.0 0.0 0.0 376.1872320566754 376.1872320566754 27.4922707297446 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.5356668758921828 0.0 + [VS]{I|L}EQ{I|L} 5.0527 + + 249 1 1.399 51069.9 1.0 13218 5791 19010 HBL1_DMSO_200M_050219_1,19011 HBL1_DMSO_200M_050219_1,19011,SVIEQIVYV True True SVIEQIVYV 91.198545 525.298083484173 73344904.0 19010.0 nc|ENSG00000077150|Q00653-4|NFKB2;;ENSG00000077150|ENST00000661543|NFKB2 5.503822644551595 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19012 91.2 23.0 3636800.0 25 0 225360.0 + 35415 QVVPVLVHL 9 107 502.3119414277781 1002.609329922356 2 502.3177673220634 MULTI CID FTMS 0 0 0 19010 2029305.25 0.1857456019513077 6 -0.70172119140625 2 Unmodified _STIRLLTSL_ ENSG00000039123|ENST00000230640|MTREX 51.41523569358685 0.0372669606867193 3 VPV{I|L}VH{I|L} 7 7 44.685 0.0 0.0 4.4569 0.0 0.0 227.1141746127734 0.0 227.1141746127734 0.0 14.69351057653448 0.0 0.0 0 0.5 0.0 0.0 0.0 VPV{I|L}VH{I|L} 4.4569 - 285 + 1 1.399 68721.4 1.0 13219 5791 19010 HBL1_DMSO_200M_050219_1,19012 HBL1_DMSO_200M_050219_1,19012,STIRLLTSL True False QVVPVLVHL 91.199724 502.317767322063 51412368.0 19010.0 ENSG00000039123|ENST00000230640|MTREX 6.708096186319987 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19013 91.201 20.0 2997200.0 25 0 247970.0 + 44975 YPRLSIPNL 9 88 536.8111891018779 1071.6078252705556 2 536.8110839724541 MULTI CID FTMS 0 0 0 19010 2022987.375 0.8148955518328467 -1 0.0661239624023437 3 Unmodified _YPRLSIPNL_ ENSG00000242265|ENST00000612748|PEG10;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 36.12702656103203 0.0967173616627612 3 [DP]{I|L}[YK]{I|L}PN{I|L} 9 4 [DP]{I|L}[YK]{I|L} + + 29.358 16.8 2.3033 2.7396 2.7396 49.72 0.0 0.0 0.0 0.0 11.24196130364323 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.7134679910804405 [DP]{I|L}[YK]{I|L}PN{I|L} 2.7396 - 208 + 1 1.399 51155.7 1.0 13220 5791 19010 HBL1_DMSO_200M_050219_1,19013 HBL1_DMSO_200M_050219_1,19013,YPRLSIPNL True True YPRLSIPNL 91.200903 536.811083972454 88777984.0 19010.0 nc|ENSG00000242265|Q86TG7|PEG10;;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;;nc|ENSG00000242265|Q86TG7-4|PEG10;;ENSG00000242265|ENST00000612748|PEG10 3.5927887757619223 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19014 91.202 44.0 1302400.0 25 0 134840.0 + 34941 SQITSLVTL 9 91 481.2819446808776 960.5493364285552 2 481.2821533083916 MULTI CID FTMS 0 0 0 19010 1575110.0 0.2217353457425598 3 -0.34283447265625 4 Unmodified _SQITSLVTL_ ENSG00000164815|ENST00000297431|ORC5;ENST00000477223.1_1_7:103767297-103805736:-|nuORF 53.832793166522166 0.0319663582346103 3 [{I|L}T]SQS{I|L} 6 5 35.729 0.0 0.0 3.7196 0.0 0.0 0.0 328.18615218466783 328.18615218466783 11.057743964882718 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.7302046884880935 0.0 [{I|L}T]SQS{I|L} 3.7196 - 533 1 1.399 50022.8 1.0 13221 5791 19010 HBL1_DMSO_200M_050219_1,19014 HBL1_DMSO_200M_050219_1,19014,SQITSLVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19015 91.203 43.0 1603400.0 25 0 232320.0 + 26522 NVIDNLIVA 9 96 485.78227411203727 969.5499952908746 2 485.7821227908134 MULTI CID FTMS 0 0 0 19010 1511759.25 0.0125387781164671 11 -1.217010498046875 5 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 36.12702656103203 0.0967173616627612 3 {[QV]|[N{I|L}]|[RA]|[KV]}DVN{I|L} 6 5 29.587 0.0 0.0 3.0517 0.0 0.0 0.0 298.1780236197058 298.1780236197058 17.17925002484727 0.0 0.0 0.0 0 0.0 1.0 0.0 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}DVN{I|L} 3.0517 - 501 1 1.399 56065.5 1.0 13222 5791 19010 HBL1_DMSO_200M_050219_1,19015 HBL1_DMSO_200M_050219_1,19015,NVIDNLIVA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19016 91.205 48.0 1393000.0 25 0 105540.0 + 22306 LPSELIVHI 9 99 510.8081106318465 1019.601668330493 2 510.8083984255791 MULTI CID FTMS 0 0 0 19010 833892.75 0.2229663187316397 3 -0.34283447265625 6 Unmodified _LPSELIVHI_ ENSG00000165355|ENST00000298097|FBXO33 60.38955033654506 0.025866396858536 3 {I|L}PSE{I|L}{I|L}VH{I|L} 9 0 + 83.274 0.0 0.0 8.1673 8.1673 97.172 0.0 0.0 0.0 56.89896278884483 11.962724883926654 11.962724883926654 35.36220550087016 0 1.274227503252014 2.0 0.0 0.0 + + {I|L}PSE{I|L}{I|L}VH{I|L};{I|L}P[RK]AWH{I|L};{I|L}P[RK]AH{I|L}W;{I|L}P[RK]AHW{I|L};{I|L}P[KG][R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}];{I|L}[Y{I|L}]{I|L}{[TV]|[{I|L}S]}{I|L}W;{I|L}[Y{I|L}]{I|L}{[TV]|[{I|L}S]}W{I|L};[KG]P{I|L}[R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}] 8.1673;4.6991;4.2311;4.1086;3.5437;1.1381;1.0156;0.99287 +;-;-;-;-;-;-;- + 942 + 1 1.399 58736.8 1.0 13223 5791 19010 HBL1_DMSO_200M_050219_1,19016 HBL1_DMSO_200M_050219_1,19016,LPSELIVHI True True LPSELIVHI 91.204585 510.808398425579 61512560.0 19010.0 ENSG00000165355|ENST00000298097|FBXO33 4.487870216369629 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19017 91.209 258.0 544470.0 25 0 67201.0 -1 0 88 613.353654546087 612.346378079487 1 613.3522216677666 MULTI CID FTMS 0 0 0 19010 335607.1875 0.996644359765392 -1 0.0661239624023437 7 3 [{I|L}V]{I|L} 3 -1 13.468 0.0 0.0 2.1994 0.0 0.0 0.0 284.0870146363808 284.0870146363808 -0.5551732784983106 0.0 -0.5551732784983106 0.0 0 0.0 1.0 0.0 0.0 [{I|L}V]{I|L} 2.1994 - 62 1 1.399 106583.9 1.0 13224 5791 19010 HBL1_DMSO_200M_050219_1,19017 HBL1_DMSO_200M_050219_1,19017, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19018 91.214 226.0 409700.0 25 0 45721.0 + 45108 YPYPYPHTLYL 11 106 713.8559261893067 1425.6972994454134 2 713.8557006716728 MULTI CID FTMS 0 0 0 19010 303381.71875 0.4418634299021131 -1 0.0661239624023437 8 Unmodified _YPYPYPHTLYL_ ENSG00000116221|ENST00000360840|MRPL37 88.90359156742426 0.0010350788511892 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAYT{I|L}{M(Oxidation (M))|F}{I|L}Y{I|L} 11 4 + 77.203 0.0 0.0 5.4151 5.4151 73.785 0.0 0.0 0.0 12.966751011209196 8.604710706454426 8.604710706454426 0.0316073096547597 0 1.4731975075880328 2.0 1.274227503252014 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAYT{I|L}{M(Oxidation (M))|F}{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YA[{I|L}T]Y{M(Oxidation (M))|F}{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAYPYT{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYAYT{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAYT{I|L}{I|L}{M(Oxidation (M))|F}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YA[{I|L}T]Y{I|L}{M(Oxidation (M))|F}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPHT{I|L}{M(Oxidation (M))|F}{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAYT{I|L}YPY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YA[{I|L}T]YYPY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPHPYT{I|L}Y{I|L} 5.4151;5.4129;5.2877;5.1481;4.9616;4.9594;4.9248;4.906;4.9038;4.7974 -;-;-;-;-;-;-;-;-;- 2805 1 1.399 71950.0 1.0 13225 5791 19010 HBL1_DMSO_200M_050219_1,19018 HBL1_DMSO_200M_050219_1,19018,YPYPYPHTLYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19019 91.217 185.0 735270.0 25 0 82056.0 + 137 AALEELVKL 9 138 493.2998136810956 984.5850744289912 2 493.2996398806572 MULTI CID FTMS 0 0 0 19010 250751.25 0.679850711492758 -1 0.0661239624023437 9 Unmodified _AALEELVKL_ ENSG00000170445|ENST00000504156|HARS1;ENST00000506579.5_1_5:140058520-140070889:-|nuORF;ENST00000518126.5_1_5:140059363-140070889:-|nuORF;nc|ENSG00000170445|P12081-2|HARS1;nc|ENSG00000170445|P12081-3|HARS1;nc|ENSG00000170445|P12081-4|HARS1 53.832793166522166 0.0319663582346103 3 AA{I|L}EE{I|L}VK{I|L} 9 0 + 69.227 0.0 0.0 7.0311 7.0311 88.966 0.0 0.0 0.0 22.37643016799587 9.444826721501684 9.444826721501684 7.619025876622906 0 1.166386562212267 1.5228787452803376 0.4247425010840047 0.1923877696554315 + + AA{I|L}EE{I|L}VK{I|L};AA{I|L}A{[NV]|[RG]}SVK{I|L};AA{I|L}EE{I|L}V{I|L}K;AA{I|L}A{[NV]|[RG]}SV{I|L}K;AAA{I|L}{[NV]|[RG]}SVK{I|L};AA{I|L}EE{I|L}[K{I|L}]V;AAAVVQSVK{I|L};AAA{I|L}{[NV]|[RG]}SV{I|L}K;AA{I|L}A{[NV]|[RG]}{I|L}KSV;AA{I|L}A{[NV]|[RG]}S[K{I|L}]V 7.0311;6.2573;6.0718;5.298;5.2662;4.9313;4.5563;4.307;4.274;4.1575 +;-;-;-;-;-;-;-;-;- + 1451 + 1 1.399 106802.0 1.0 13226 5791 19010 HBL1_DMSO_200M_050219_1,19019 HBL1_DMSO_200M_050219_1,19019,AALEELVKL True True AALEELVKL 91.217228 493.299639880657 2912301.0 19010.0 nc|ENSG00000170445|P12081-3|HARS1;;nc|ENSG00000170445|P12081-2|HARS1;;ENST00000506579.5_1_5:140058520-140070889:-|nuORF;;nc|ENSG00000170445|P12081-4|HARS1;;ENST00000518126.5_1_5:140059363-140070889:-|nuORF;;ENSG00000170445|ENST00000504156|HARS1 5.005504290262858 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19020 91.222 284.0 314800.0 25 0 18660.0 -1 0 105 637.051678770802 2544.177609216808 4 637.3029052615166 MULTI CID FTMS 0 0 0 19010 224047.859375 1.0 0 0.0 10 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 45.895 0.0 0.0 1.8039 0.0 0.0 0.0 1602.6328145410223 1602.6328145410223 6.391336957054499 0.0 0.0 0.0 0 0.4247425010840047 1.154901959985743 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.8039 - 1393 1 1.399 76597.1 1.0 13227 5791 19010 HBL1_DMSO_200M_050219_1,19020 HBL1_DMSO_200M_050219_1,19020, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19021 91.236 753.0 101310.0 25 0 20451.0 -1 0 94 1109.503135473234 2216.991718013268 2 1110.002001941204 MULTI CID FTMS 0 0 0 19010 212244.984375 1.0 0 0.0 11 3 VQY{M(Oxidation (M))|F}ANQQA[YG]M[NP] 14 -1 68.651 0.0 0.0 3.0966 0.0 0.0 587.2730000241542 0.0 587.2730000241542 0.0 55.48918221526151 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.3494850021680094 VQY{M(Oxidation (M))|F}ANQQA[YG]M[NP] 3.0966 - 6062 + 1 1.399 57948.4 1.0 13228 5791 19010 HBL1_DMSO_200M_050219_1,19021 HBL1_DMSO_200M_050219_1,19021, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19022 91.239 179.0 469740.0 25 0 58414.0 + 1624 ALLVLSFMLL 10 105 560.3474866065243 0 560.3477050662041 PEAK CID FTMS 0 0 0 19010 194123.3125 0.4696031380527297 -1 0.0661239624023437 12 Unmodified _ALLVLSFMLL_ REV__ENST00000492822.1_1_7:10979220-10979736:-|nuORF 18.13498045792455 0.3131020363041972 3 {M(Oxidation (M))|F}S[KQ]M{I|L}T 7 -1 18.231 0.0 0.0 1.6297 0.0 0.0 200.17475729332347 80.0512941949828 280.22605148830627 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}S[KQ]M{I|L}T 1.6297 - 469 + 1 1.399 68116.7 1.0 13229 5791 19010 HBL1_DMSO_200M_050219_1,19022 HBL1_DMSO_200M_050219_1,19022,ALLVLSFMLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19023 91.253 800.0 136750.0 25 0 49633.0 -1 LRRRPRVYYRI 11 115 795.4769442392586 1588.9393355453171 2 795.4790527224541 MULTI CID FTMS 0 0 0 19010 177119.984375 0.4457728128612716 -1 0.0661239624023437 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LRRRPRVYYRI_ ENST00000254190.3_1_15:101718013-101718115:-|nuORF 0.0 0.8751479354844584 3 {M(Oxidation (M))|F} 1 -1 9.8329 0.0 0.0 0.61883 0.0 0.0 1423.859942090042 0.0 1423.859942090042 0.0 0.3689310708045923 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.61883 - 70 + 1 1.399 86400.8 0.9700000286102296 13230 5791 19010 HBL1_DMSO_200M_050219_1,19023 HBL1_DMSO_200M_050219_1,19023,LRRRPRVYYRI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19024 91.267 800.0 201780.0 25 0 8565.2 -1 GLCSWCQCCLL 11 179 671.7756936121982 1341.5368342911963 2 671.7770873904228 MULTI CID FTMS 0 0 0 19010 154573.96875 0.1841086152791368 7 -0.8057479858398438 14 2 Carbamidomethyl (C) _GLC(Carbamidomethyl (C))SWC(Carbamidomethyl (C))QCCLL_ ENST00000582176.1_1_3:127800095-127800410:-|nuORF 9.38312468134398 0.8308777417566128 3 [EP]GDWSETV 9 -1 52.494 0.0 0.0 3.913 0.0 0.0 0.0 338.08284054815823 338.08284054815823 7.710324346314849 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.5941876774005248 0.0 [EP]GDWSETV 3.913 - 1820 1 1.399 121206.3 0.9300000071525574 13231 5791 19010 HBL1_DMSO_200M_050219_1,19024 HBL1_DMSO_200M_050219_1,19024,GLCSWCQCCLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19025 91.282 800.0 193550.0 25 0 15466.0 + 8760 RILDPAYPDITL 12 166 693.8850922093197 1385.7556314854394 2 693.8871948122978 MULTI CID FTMS 0 0 0 19010 158335.1875 1.0 0 0.0 15 Unmodified _EVRRSRPSWLT_ nc|ENSG00000130939|O95155-4|UBE4B;ENSG00000130939|ENST00000343090|UBE4B;nc|ENSG00000130939|O95155-3|UBE4B;nc|ENSG00000130939|O95155-2|UBE4B 13.614867670302877 0.751941774060705 3 [DP]{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}Y[DP]{I|L}T{I|L} 12 9 + 41.192 0.0 0.0 2.9725 2.9725 74.731 0.0 0.0 0.0 5.132960238847922 9.124628150806371 5.132960238847922 5.132960238847922 0 1.0924778212679485 0.8538719643217619 0.0 0.2396518287104437 [DP]{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}Y[DP]{I|L}T{I|L};{[TV]|[{I|L}S]}PTV[PA]Y[DP]{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}RV[PA]Y[DP]{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}P{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}Y[DP]{I|L}T{I|L};[{I|L}P]STV[PA]Y[DP]{I|L}T{I|L};[VP]TTV[PA]Y[DP]{I|L}T{I|L};{[TV]|[{I|L}S]}PTV{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[DP]{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}RV{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[DP]{I|L}T{I|L};[{I|L}P]D{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}Y[DP]{I|L}T{I|L};[{I|L}P]STV{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[DP]{I|L}T{I|L} 2.9725;2.6021;2.5997;2.4681;2.4372;2.3184;2.3149;2.3125;2.221;2.15 -;-;-;-;-;-;-;-;-;- 2070 1 1.399 114864.5 0.9300000071525574 13232 5791 19010 HBL1_DMSO_200M_050219_1,19025 HBL1_DMSO_200M_050219_1,19025,EVRRSRPSWLT False False RILDPAYPDITL 91.281718 693.887194812298 1489333.625 19010.0 nc|ENSG00000130939|O95155-4|UBE4B;;ENSG00000130939|ENST00000343090|UBE4B;;nc|ENSG00000130939|O95155-3|UBE4B;;nc|ENSG00000130939|O95155-2|UBE4B 6.222174644470215 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19026 91.288 348.0 229090.0 25 0 5338.4 + -1 AGPPAQQRPPPQGGP 15 126 728.3602505165917 1454.7059480999833 2 728.3610717654228 MULTI CID FTMS 0 0 0 19010 155144.21875 1.0 0 0.0 16 Oxidation (M) _RDVMRM(Oxidation (M))NYELL_ ENSG00000008056|ENST00000295987|SYN1;nc|ENSG00000008056|P17600-2|SYN1 13.614867670302877 0.751941774060705 3 {[TV]|[{I|L}S]}{[RE]|[WV]}APG{M(Oxidation (M))|F}SHE{I|L}{I|L} 13 -1 + 54.18 0.0 0.0 3.7244 3.7244 82.914 0.0 0.0 0.0 14.259780480963109 32.78646854064849 14.259780480963109 16.342446746993637 0 0.6549471895720984 2.0 0.4247425010840047 0.3252574989159953 {[TV]|[{I|L}S]}{[RE]|[WV]}APG{M(Oxidation (M))|F}SHE{I|L}{I|L};[TA]{[QG]|[NA]}KAPG{M(Oxidation (M))|F}SHE{I|L}{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}AP[C(Carbamidomethyl (C))M]HE{I|L}{I|L};[YK]PPAPG{M(Oxidation (M))|F}SHE{I|L}{I|L};[Q{I|L}]{M(Oxidation (M))|F}PAPG{M(Oxidation (M))|F}SHE{I|L}{I|L};{[TV]|[{I|L}S]}[DN]{I|L}WESHE{I|L}{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}GWESHE{I|L}{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}[QP]{M(Oxidation (M))|F}SHE{I|L}{I|L};{[QS]|[NT]}AAKAPG{M(Oxidation (M))|F}SHE{I|L}{I|L};[TA]{[QG]|[NA]}P[KA]G{M(Oxidation (M))|F}SHE{I|L}{I|L} 3.7244;2.601;2.5967;2.5188;2.4837;2.4594;2.405;2.3928;2.3481;2.2609 -;-;-;-;-;-;-;-;-;- 7495 1 1.399 68227.4 1.0 13233 5791 19010 HBL1_DMSO_200M_050219_1,19026 HBL1_DMSO_200M_050219_1,19026,RDVMRMNYELL False False AGPPAQQRPPPQGGP 91.288024 728.361071765423 109816.546875 19010.0 ENSG00000008056|ENST00000295987|SYN1;;nc|ENSG00000008056|P17600-2|SYN1 -0.0991628170013427 2.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19027 91.295 361.0 613860.0 25 0 106530.0 + 44402 YLYDRLLRI 9 105 408.9081671885063 1223.702672165719 3 408.9076721072197 MULTI CID FTMS 0 0 0 19010 141182.28125 0.2478165229848173 -2 0.17303466796875 17 Unmodified _YLYDRLLRI_ ENSG00000101003|ENST00000262460|GINS1 59.36838082759317 0.0264317782606298 3 Y{I|L}YD{I|L}R{I|L}{I|L}R 9 2 + 96.112 0.0 0.0 7.8542 7.8542 85.266 0.0 0.0 0.0 36.47817481888637 4.393326938302636 4.393326938302636 2.755762612236907 0 0.3807196863200844 2.0 0.0 1.9731975075880328 Y{I|L}YD{I|L}R{I|L}{I|L}R;Y{I|L}{I|L}YDR{I|L}{I|L}R;Y{I|L}YDR{I|L}{I|L}{I|L}R;Y{I|L}YD{I|L}R{I|L}R{I|L};Y{I|L}Y{I|L}DR{I|L}{I|L}R;Y{I|L}{I|L}YDR{I|L}R{I|L};Y{I|L}YDR{I|L}{I|L}R{I|L};Y{I|L}Y{I|L}DR{I|L}R{I|L};Y[RH][NP]R{I|L}{I|L}R;Y[RH][NP]R{I|L}R{I|L} 7.8542;7.629;7.6082;7.4952;7.4445;7.27;7.2492;7.0855;2.3563;1.9973 -;-;-;-;-;-;+;-;-;- + 457 + 1 1.399 175334.5 1.0 13234 5791 19010 HBL1_DMSO_200M_050219_1,19027 HBL1_DMSO_200M_050219_1,19027,YLYDRLLRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19028 91.304 519.0 314730.0 25 0 26142.0 + 5337 DLGQIREIF 9 174 545.796794412356 1089.579035891512 2 546.2961913943291 MULTI CID FTMS 0 0 0 19010 132318.921875 0.465562115330654 10 -1.0992355346679688 18 Unmodified _DLGQIREIF_ REV__ENSG00000115355|ENST00000436346|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-2|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-3|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-4|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A 16.942295170755138 0.3780752226737986 3 QEY 3 -1 23.188 0.0 0.0 2.1281 0.0 0.0 0.0 666.3734835260374 666.3734835260374 0.5360498482393439 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QEY 2.1281 - 448 + 1 1.399 132501.8 1.0 13235 5791 19010 HBL1_DMSO_200M_050219_1,19028 HBL1_DMSO_200M_050219_1,19028,DLGQIREIF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19029 91.319 800.0 43351.0 25 0 2876.5 -1 0 80 1063.986743152142 0 1063.986743152142 PEAK CID FTMS 0 0 0 -1 0 19 3 EV 2 -1 7.9588 0.0 0.0 0.37436 0.0 0.0 1194.504723021278 700.3205660455686 1894.8252890668464 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EV 0.37436 - 129 + 1 1.399 29215.7 0.8399999737739563 13236 5791 19010 HBL1_DMSO_200M_050219_1,19029 HBL1_DMSO_200M_050219_1,19029, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19030 91.326 404.0 289830.0 25 0 28063.0 -1 0 133 919.9372074737536 1837.8598620143075 2 919.9388305544852 MULTI CID FTMS 0 0 0 19010 111657.765625 0.6261920138380773 -1 0.0661239624023437 20 3 [{I|L}T]QQ{I|L}MS 7 -1 32.338 0.0 0.0 1.7595 0.0 0.0 0.0 1033.4288163898668 1033.4288163898668 5.970548987096038 0.0 0.0 0.0 0 0.0 1.0 1.9361818737241727 0.0 [{I|L}T]QQ{I|L}MS 1.7595 - 13423 1 1.399 78856.5 1.0 13237 5791 19010 HBL1_DMSO_200M_050219_1,19030 HBL1_DMSO_200M_050219_1,19030, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19032 91.331 62.0 881070.0 25 0 115240.0 + 14016 IAFHTIPVI 9 86 505.80570295180434 0 505.8053466677666 PEAK CID FTMS 0 0 0 19031 499507.5625 0.4392425993798814 1 -0.1304702758789062 1 Unmodified _IAFHTIPVI_ ENSG00000042445|ENST00000295802|RETSAT;nc|ENSG00000042445|Q6NUM9-2|RETSAT 40.44857923139169 0.0595120860820594 3 {I|L}THYV 5 6 22.167 0.0 0.0 2.1956 0.0 0.0 327.2150232900362 66.03567682437733 393.2507001144135 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9247425010840048 0.0 {I|L}THYV 2.1956 - 107 + 1 1.419 49572.1 1.0 13238 5792 19031 HBL1_DMSO_200M_050219_1,19032 HBL1_DMSO_200M_050219_1,19032,IAFHTIPVI True True IAFHTIPVI 91.331015 505.805346667767 5787303.0 19031.0 ENSG00000042445|ENST00000295802|RETSAT;;nc|ENSG00000042445|Q6NUM9-2|RETSAT 3.46317195892334 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19033 91.333 59.0 1001800.0 25 0 112600.0 -1 PFFCDMTV 8 103 516.7132182130775 1031.411883492955 2 516.7141601443291 MULTI CID FTMS 0 0 0 19031 436893.71875 0.4485674051134493 4 -0.4393081665039062 2 Carbamidomethyl (C),Oxidation (M) _PFFC(Carbamidomethyl (C))DM(Oxidation (M))TV_ ENSG00000180042|ENST00000572493|OR1R1P 10.183394434864962 0.7604730176254005 3 {I|L} 1 -1 13.495 0.0 0.0 1.3084 0.0 0.0 900.3169108140472 0.0 900.3169108140472 0.0 -9.5205343810445 -9.5205343810445 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3084 - 107 + 1 1.419 50493.6 1.0 13239 5792 19031 HBL1_DMSO_200M_050219_1,19033 HBL1_DMSO_200M_050219_1,19033,PFFCDMTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19034 91.334 42.0 1408200.0 25 0 187140.0 + 33381 SGLLKVWQV 9 97 515.3082875164796 1028.602022099759 2 515.3084594607353 MULTI CID FTMS 0 0 0 19031 1151224.875 1.0 0 0.0 3 Unmodified _SGLLKVWQV_ ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF 57.72198328787511 0.0273433238377839 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KVWQV 8 3 + 58.263 0.0 0.0 5.6643 5.6643 80.62 0.0 0.0 0.0 3.6000785562331927 8.979400086720375 3.6000785562331927 3.6000785562331927 0 1.9291746928241125 0.958607314841775 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KVWQV;[SG]{I|L}{I|L}KVWQV;{[VA]|[{I|L}G]}S{I|L}KVWQV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KV{[DA]|[EG]}QV;{I|L}{I|L}[SG]KVWQV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KVAA[RD];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}RD{I|L}[KQ];[K{I|L}]EKVWQV;[SG]{I|L}{I|L}KVAA[RD];[SG]{I|L}{I|L}RD{I|L}[KQ] 5.6643;5.3143;4.8007;4.7639;3.8059;3.6881;3.6386;3.4978;3.3434;3.2886 -;+;-;-;-;-;-;-;-;- + 730 1 1.419 50860.5 1.0 13240 5792 19031 HBL1_DMSO_200M_050219_1,19034 HBL1_DMSO_200M_050219_1,19034,SGLLKVWQV True True SGLLKVWQV 91.333703 515.308459460735 9678287.0 19031.0 ENST00000489767.5_1_2:219130391-219134818:-|nuORF;;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;;ENSG00000127837|ENST00000248450|AAMP 9.790901184082031 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19035 91.335 49.0 1325800.0 25 0 136680.0 + 21290 LPEEYLSAI 9 83 517.7744517283699 0 517.7739135622978 PEAK CID FTMS 0 0 0 19031 966058.75 1.0 0 0.0 4 Unmodified _LPEEYLSAI_ ENSG00000066777|ENST00000262215|ARFGEF1 18.13498045792455 0.2189554373504223 3 Y{I|L}E 3 7 12.307 0.0 0.0 1.1908 0.0 0.0 402.24823099404585 223.07229028873283 625.3205212827787 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}E 1.1908 - 41 + 1 1.419 56652.8 1.0 13241 5792 19031 HBL1_DMSO_200M_050219_1,19035 HBL1_DMSO_200M_050219_1,19035,LPEEYLSAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19036 91.336 46.0 1068800.0 25 0 123560.0 + -1 QPMFMKLL 8 83 512.2732094142922 1022.5318658953844 2 512.2741577029228 MULTI CID FTMS 0 0 0 19031 877282.5625 1.0 0 0.0 5 Oxidation (M) _QPM(Oxidation (M))FMKLL_ REV__ENST00000346329.7_1_11:70281328-70281493:+|nuORF 18.13498045792455 0.6430038125133779 3 {I|L}{I|L}MK{I|L}{I|L} 6 -1 38.765 0.0 0.0 3.7911 0.0 0.0 293.0546452916719 0.0 293.0546452916719 0.0 11.396613669973444 0.0 0.0 0 1.6861818737241734 0.0 0.0 0.0 {I|L}{I|L}MK{I|L}{I|L} 3.7911 - 140 + 1 1.419 44022.4 1.0 13242 5792 19031 HBL1_DMSO_200M_050219_1,19036 HBL1_DMSO_200M_050219_1,19036,QPMFMKLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19037 91.344 444.0 535430.0 25 0 22103.0 -1 0 160 1164.5395707415664 3490.5968828249 3 1164.876269519329 MULTI CID FTMS 0 0 0 19031 679966.875 0.543670132066307 -2 0.1979904174804687 6 3 {I|L}VQY{M(Oxidation (M))|F}ANQQAED 12 -1 83.376 0.0 0.0 2.3886 0.0 0.0 1747.8070245529093 333.1307772272094 2080.9378017801187 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 1.4802046884880935 {I|L}VQY{M(Oxidation (M))|F}ANQQAED 2.3886 - 574710 + 1 1.419 142204.9 1.0 13243 5792 19031 HBL1_DMSO_200M_050219_1,19037 HBL1_DMSO_200M_050219_1,19037, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19038 91.346 106.0 514180.0 25 0 107550.0 + 30605 RFAWLWLLPLL 11 74 476.62409106967095 1426.850443809213 3 476.6239501833916 MULTI CID FTMS 0 0 0 19031 577290.375 0.7140800380115112 -2 0.1979904174804687 7 Unmodified _RFAWLWLLPLL_ REV__ENST00000265563.12_1_3:48788858-48788939:-|nuORF 1.4551175022131473 0.8682825962816412 3 [{I|L}P]Q 3 -1 15.062 0.0 0.0 1.0556 0.0 0.0 0.0 1085.6323096141537 1085.6323096141537 1.5668186536885305 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [{I|L}P]Q 1.0556 - 58 1 1.419 57496.5 1.0 13244 5792 19031 HBL1_DMSO_200M_050219_1,19038 HBL1_DMSO_200M_050219_1,19038,RFAWLWLLPLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19039 91.348 82.0 549150.0 25 0 69646.0 + -1 NMLPQIFRV 9 78 567.3082365767435 1132.601920220287 2 567.3107177615166 MULTI CID FTMS 0 0 0 19031 456238.8125 0.9513893916569316 -2 0.1979904174804687 8 Oxidation (M) _NM(Oxidation (M))LPQIFRV_ ENST00000544258.1_3_12:4598975-4611546:-|nuORF;ENSG00000047621|ENST00000261250|C12orf4 25.399314129420983 0.2080152500878129 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}K 4 -1 28.94 0.0 0.0 2.5552 0.0 0.0 0.0 627.3172701471311 627.3172701471311 15.445312593723983 0.0 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}K 2.5552 - 75 + 1 1.419 41077.8 1.0 13245 5792 19031 HBL1_DMSO_200M_050219_1,19039 HBL1_DMSO_200M_050219_1,19039,NMLPQIFRV False False NMLPQIFRV 91.348326 567.310717761517 8604510.0 19031.0 ENST00000544258.1_3_12:4598975-4611546:-|nuORF;;ENSG00000047621|ENST00000261250|C12orf4 5.305448055267334 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19040 91.35 91.0 752570.0 25 0 96829.0 + 37634 TLLNVIKSV 9 97 493.8166025251902 985.6186521171804 2 493.8179504275322 MULTI CID FTMS 0 0 0 19031 381622.75 1.0 0 0.0 9 Unmodified _TLLNVIKSV_ ENSG00000123104|ENST00000381340|ITPR2;ENSG00000150995|ENST00000649015|ITPR1;ENST00000493491.5_1_3:4841632-4887906:+|nuORF;ENST00000538984.1_1_12:26564247-26572125:-|nuORF;nc|ENSG00000150995|Q14643-2|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1 23.78978130925829 0.2284941198415988 3 [{I|L}T]{I|L}GGV{I|L}KSV 10 2 + 52.727 0.0 0.0 5.3496 5.3496 76.524 0.0 0.0 0.0 20.791812460476248 7.667217886028617 7.667217886028617 1.7609125905568137 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]{I|L}GGV{I|L}KSV;[{I|L}T]{I|L}GR{I|L}KSV;[{I|L}T]{I|L}NV{I|L}KSV;[{I|L}T]{I|L}GGV[VS]K{I|L};[{I|L}T]{I|L}GR[VS]K{I|L};[{I|L}T]{I|L}NV[VS]K{I|L};[{I|L}T]{[NV]|[RG]}[W{I|L}]K{I|L} 5.3496;5.171;4.9923;4.5717;4.393;4.2144;2.1433 -;-;+;-;-;-;- + 315 + 1 1.419 54640.7 1.0 13246 5792 19031 HBL1_DMSO_200M_050219_1,19040 HBL1_DMSO_200M_050219_1,19040,TLLNVIKSV False True TLLNVIKSV 91.350321 493.817950427532 2684319.25 19031.0 nc|ENSG00000150995|Q14643-3|ITPR1;;nc|ENSG00000150995|Q14643-4|ITPR1;;nc|ENSG00000150995|Q14643-2|ITPR1;;nc|ENSG00000150995|Q14643-6|ITPR1;;nc|ENSG00000150995|Q14643-7|ITPR1;;ENST00000538984.1_1_12:26564247-26572125:-|nuORF;;nc|ENSG00000150995|Q14643-5|ITPR1;;nc|ENSG00000150995|Q14643-8|ITPR1;;ENSG00000150995|ENST00000649015|ITPR1;;ENSG00000123104|ENST00000381340|ITPR2;;ENST00000493491.5_1_3:4841632-4887906:+|nuORF 4.994224309921265 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19041 91.353 108.0 625340.0 25 0 51198.0 + 24204 MAFSLFHRI 9 94 374.5352278915892 1120.5838542749675 3 374.5352661013603 MULTI CID FTMS 0 0 0 19031 341706.3125 1.0 0 0.0 10 Unmodified _MAFSLFHRI_ ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-2|DNA2;nc|ENSG00000138346|P51530-3|DNA2;nc|ENSG00000138346|P51530-4|DNA2 23.78978130925829 0.2284941198415988 3 [WY]S{I|L}{M(Oxidation (M))|F}H{I|L}R 8 5 + 36.204 0.0 0.0 3.2308 3.2308 71.544 0.0 0.0 0.0 6.989700043360188 3.203351508593677 3.203351508593677 2.632414347745815 0 0.0 0.0 0.0 0.3252574989159953 [WY]S{I|L}{M(Oxidation (M))|F}H{I|L}R;[WY]S{I|L}{M(Oxidation (M))|F}{I|L}HR;[WY]S{I|L}{M(Oxidation (M))|F}HR{I|L};[WY]S{M(Oxidation (M))|F}{I|L}H{I|L}R;[WY]S{M(Oxidation (M))|F}{I|L}{I|L}HR;[WY]S{M(Oxidation (M))|F}{I|L}HR{I|L} 3.2308;2.9959;2.9449;2.6719;2.437;2.386 -;-;-;-;-;- 106 + 1 1.419 64192.9 1.0 13247 5792 19031 HBL1_DMSO_200M_050219_1,19041 HBL1_DMSO_200M_050219_1,19041,MAFSLFHRI False True MAFSLFHRI 91.352594 374.53526610136 2940811.25 19031.0 nc|ENSG00000138346|P51530-3|DNA2;;ENSG00000138346|ENST00000358410|DNA2;;nc|ENSG00000138346|P51530-4|DNA2;;nc|ENSG00000138346|P51530-2|DNA2 6.819492340087891 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19042 91.358 286.0 263230.0 25 0 41900.0 + 44441 YMIGSEVGNYL 11 107 623.2945506494267 1244.5745483656533 2 623.2950317263603 MULTI CID FTMS 0 0 0 19031 305188.21875 0.4688760827670441 1 -0.1304702758789062 11 Unmodified _YMIGSEVGNYL_ ENSG00000099956|ENST00000644036|SMARCB1;nc|ENSG00000099956|Q12824-2|SMARCB1 22.736283301280096 0.5583477779825423 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NR{M(Oxidation (M))|F}M{I|L} 7 8 40.922 0.0 0.0 3.288 0.0 0.0 0.0 286.0831215364772 286.0831215364772 26.94283241038235 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NR{M(Oxidation (M))|F}M{I|L} 3.288 - 805 + 1 1.419 60755.1 1.0 13248 5792 19031 HBL1_DMSO_200M_050219_1,19042 HBL1_DMSO_200M_050219_1,19042,YMIGSEVGNYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19043 91.37 701.0 219080.0 25 0 21067.0 + 14653 IIMLEALERV 10 143 601.8441916791113 1201.6738304250223 2 601.8444091677666 MULTI CID FTMS 0 0 0 19031 269511.40625 0.4098540346483084 1 -0.1304702758789062 12 Oxidation (M) _IIM(Oxidation (M))LEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 57.24910588100465 0.0438022649904578 3 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}ERV 10 0 + 97.108 0.0 0.0 8.0811 8.0811 94.591 0.0 0.0 0.0 65.68163502828014 10.969100130080562 10.969100130080562 11.102739745660386 0 1.1989700043360187 2.0 0.805462187404089 0.0 + + {I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}ERV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}[RD]{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EAVVW{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EAV[W{I|L}]V;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EV[DV]RV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}VE[DV]RV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}V[DV]ERV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EVAVW{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EVA[W{I|L}]V;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}VEAVW{I|L} 8.0811;7.1571;7.0675;6.9178;6.8269;6.5661;6.5105;6.4858;6.3361;6.2251 +;-;-;-;-;-;-;-;-;- + 4432 + 1 1.419 112888.9 1.0 13249 5792 19031 HBL1_DMSO_200M_050219_1,19043 HBL1_DMSO_200M_050219_1,19043,IIMLEALERV True False IIMLEALERV 91.370069 601.844409167767 10592958.0 19031.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 6.896916548411052 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19044 91.373 137.0 379370.0 25 0 66244.0 -1 PLALKMSTI 9 99 495.2900240193716 988.5654951055432 2 495.2877380251884 MULTI CID FTMS 0 0 0 19031 164963.984375 0.0803841125462469 10 -1.08514404296875 13 Oxidation (M) _PLALKM(Oxidation (M))STI_ ENSG00000147082|ENST00000376042|CCNB3 9.347437153973935 0.588369872918737 3 [{I|L}T]{[{M(Oxidation (M))|F}D]|MM}R{I|L}[KP] 8 -1 + 24.181 0.0 0.0 2.4461 2.4461 70.584 0.0 0.0 0.0 2.4549051106284736 6.487803220352358 2.4549051106284736 2.966430335102288 0 0.0 2.0 0.1505149978319906 0.0 [{I|L}T]{[{M(Oxidation (M))|F}D]|MM}R{I|L}[KP];[{I|L}P]{[YC]|[HE]}R{I|L}[KP];{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}T]R{I|L}[KP];[{I|L}T]{[{M(Oxidation (M))|F}D]|MM}[VG]{I|L}[KP];[{I|L}P]{[YC]|[HE]}[VG]{I|L}[KP];{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}E]R{I|L}[KP];[{I|L}A][YE]R{I|L}[KP];{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}T][VG]{I|L}[KP];{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}E][VG]{I|L}[KP] 2.4461;2.146;1.537;1.5092;1.2091;1.0926;0.61184;0.60007;0.15565 -;-;-;-;-;-;-;-;- 185 1 1.419 45319.3 1.0 13250 5792 19031 HBL1_DMSO_200M_050219_1,19044 HBL1_DMSO_200M_050219_1,19044,PLALKMSTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19045 91.375 111.0 367000.0 25 0 49329.0 41199 VPEKRVKEL 9 85 549.3375506791191 1096.660548425038 2 549.3379394412041 MULTI CID FTMS 0 0 0 19031 144884.40625 0.5004627036465451 1 -0.1304702758789062 14 Unmodified _VPEKRVKEL_ ENST00000441788.6_1_19:3537705-3537831:+|nuORF 13.90604991867851 0.4602628045680013 3 V{I|L}E{I|L} 4 6 37.933 0.0 0.0 3.459 0.0 0.0 624.371014190128 0.0 624.371014190128 0.0 7.258950235313861 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.0 V{I|L}E{I|L} 3.459 - 59 1 1.419 36948.1 1.0 13251 5792 19031 HBL1_DMSO_200M_050219_1,19045 HBL1_DMSO_200M_050219_1,19045,VPEKRVKEL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19046 91.389 800.0 157730.0 25 0 13309.0 + + 9141 AQFGYYFRV 9 162 575.7841615878182 1149.5537702424365 2 575.7889282107353 MULTI CID FTMS 0 0 0 19031 153829.421875 0.5884937031405753 4 -0.4393081665039062 15 Unmodified _FFRHHMYI_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 20.871210003555333 0.6025813472596342 3 [QA]{M(Oxidation (M))|F}GYY 6 -1 29.021 0.0 0.0 2.5246 0.0 0.0 0.0 417.22577844791255 417.22577844791255 2.823294969977379 0.0 0.0 0.0 0 0.0 0.5376020021010439 0.0 0.0 [QA]{M(Oxidation (M))|F}GYY 2.5246 - 433 + 1 1.419 100322.6 0.8399999737739563 13252 5792 19031 HBL1_DMSO_200M_050219_1,19046 HBL1_DMSO_200M_050219_1,19046,FFRHHMYI False False AQFGYYFRV 91.389023 575.788928210735 6625113.5 19031.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 6.428742090861003 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19047 91.404 800.0 53457.0 25 0 7730.9 -1 0 75 1159.7792290378802 2317.543905142561 2 1160.290454089642 MULTI CID FTMS 0 0 0 -1 0 16 3 W{M(Oxidation (M))|F} 2 -1 7.4743 0.0 0.0 0.32251 0.0 0.0 814.8449074496556 1166.5137423151002 1981.358649764756 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W{M(Oxidation (M))|F} 0.32251 - 124 + 1 1.419 34612.9 0.8799999952316284 13253 5792 19031 HBL1_DMSO_200M_050219_1,19047 HBL1_DMSO_200M_050219_1,19047, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19048 91.418 800.0 210880.0 25 0 23539.0 + 30791 RIFGETIDIAV 11 144 617.3463382228346 1232.678123512469 2 617.8469726443291 MULTI CID FTMS 0 0 0 19031 134730.09375 0.7255151064314755 -1 0.131866455078125 17 Unmodified _RIFGETIDIAV_ ENSG00000092094|ENST00000206542|OSGEP;ENST00000555656.5_1_14:20917248-20917425:-|nuORF;ENST00000555785.2_1_14:20917121-20917425:-|nuORF 51.41523569358685 0.1097924807909074 3 D{I|L}TWW{I|L}V 7 7 33.66 0.0 0.0 2.7306 0.0 0.0 301.20157429547527 0.0 301.20157429547527 0.0 14.7195527621958 0.0 0.0 0 0.2614393726401688 0.0 1.0189301784845295 0.0 D{I|L}TWW{I|L}V 2.7306 - 1782 + 1 1.419 124896.6 0.75 13254 5792 19031 HBL1_DMSO_200M_050219_1,19048 HBL1_DMSO_200M_050219_1,19048,RIFGETIDIAV True True RIFGETIDIAV 91.417894 617.346 2169261.75 19031.0 ENSG00000092094|ENST00000206542|OSGEP;;ENST00000555656.5_1_14:20917248-20917425:-|nuORF;;ENST00000555785.2_1_14:20917121-20917425:-|nuORF 5.709237893422444 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19049 91.432 800.0 122680.0 25 0 5614.7 + -1 SVLEALSGV 9 116 873.6573237744426 3490.60018923137 4 874.1617309451103 MULTI CID FTMS 0 0 0 19031 126396.4765625 0.7003004685796592 -2 0.1979904174804687 18 ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1;ENSG00000183486|ENST00000330714|MX2;nc|ENSG00000183486|P20592-2|MX2 3 {[QN]|[E{I|L}]|[KN]}ASV{I|L}SYDD{M(Oxidation (M))|F}Y 12 -1 66.557 0.0 0.0 1.9067 0.0 0.0 0.0 2084.979436628108 2084.979436628108 37.19689999063044 0.0 0.0 0.0 0 0.0 0.0 1.5629529932484498 0.6549471895720984 {[QN]|[E{I|L}]|[KN]}ASV{I|L}SYDD{M(Oxidation (M))|F}Y 1.9067 - 7583 1 1.419 70816.1 0.8399999737739563 13255 5792 19031 HBL1_DMSO_200M_050219_1,19049 HBL1_DMSO_200M_050219_1,19049, False False SVLEALSGV 91.431756 874.16173094511 0.0 19031.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1;;ENSG00000183486|ENST00000330714|MX2;;nc|ENSG00000183486|P20592-2|MX2 7.270792643229167 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19050 91.447 800.0 148950.0 25 0 8455.8 -1 0 135 862.4184443199013 2584.2335035599035 3 862.7537719607353 MULTI CID FTMS 0 0 0 19031 127634.734375 0.6808724605094084 -1 0.131866455078125 19 3 {M(Oxidation (M))|F}VY[RD]VHVY{[VA]|[{I|L}G]}V{M(Oxidation (M))|F}GY 15 -1 74.575 0.0 0.0 2.8858 0.0 0.0 751.3845082013687 0.0 751.3845082013687 0.0 50.47228775315752 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.0 {M(Oxidation (M))|F}VY[RD]VHVY{[VA]|[{I|L}G]}V{M(Oxidation (M))|F}GY 2.8858 - 7793 1 1.419 82707.0 0.8399999737739563 13256 5792 19031 HBL1_DMSO_200M_050219_1,19050 HBL1_DMSO_200M_050219_1,19050, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19051 91.456 538.0 294680.0 25 0 26724.0 + 24841 MPLDDTKLII 10 173 579.825987529373 0 579.8259155154228 PEAK CID FTMS 0 0 0 19031 121963.4921875 1.0 0 0.0 20 Unmodified _MPLDDTKLII_ ENSG00000169180|ENST00000304658|XPO6;nc|ENSG00000169180|Q96QU8-2|XPO6 41.95555342248728 0.0932794664696581 3 PP{I|L}S[Q{I|L}]{M(Oxidation (M))|F} 7 7 26.088 0.0 0.0 2.2536 0.0 0.0 131.03923148114387 241.1561220758422 372.1953535569861 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.0 PP{I|L}S[Q{I|L}]{M(Oxidation (M))|F} 2.2536 - 904 + 1 1.419 121448.2 1.0 13257 5792 19031 HBL1_DMSO_200M_050219_1,19051 HBL1_DMSO_200M_050219_1,19051,MPLDDTKLII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19053 91.461 30.0 1825300.0 25 0 359430.0 + 38 AAAPQLLIV 9 78 448.2842274182863 894.5539019033725 2 448.2844116091728 MULTI CID FTMS 0 0 0 19052 1516159.375 0.3961562964952149 1 -0.0804977416992187 1 Unmodified _AAAPQLLIV_ ENSG00000130303|ENST00000252593|BST2;nc|ENSG00000130303|Q10589-2|BST2 24.67388899826682 0.2172451872415813 3 [QP]{I|L}{I|L}A 5 5 30.299 0.0 0.0 3.3871 0.0 0.0 0.0 369.2155794266387 369.2155794266387 14.101523083377469 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [QP]{I|L}{I|L}A 3.3871 - 171 1 1.441 47385.1 1.0 13258 5793 19052 HBL1_DMSO_200M_050219_1,19053 HBL1_DMSO_200M_050219_1,19053,AAAPQLLIV False True AAAPQLLIV 91.460954 448.284411609173 26299138.0 19052.0 ENSG00000130303|ENST00000252593|BST2;;nc|ENSG00000130303|Q10589-2|BST2 1.4258211553096771 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19054 91.462 35.0 1870600.0 25 0 198920.0 + 29503 QLLEKVIEL 9 104 542.8339757946347 1083.6533986560694 2 542.8347045779228 MULTI CID FTMS 0 0 0 19052 1027782.75 0.3129343814791376 1 -0.0804977416992187 2 Unmodified _QLLEKVIEL_ ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;nc|ENSG00000093144|Q9NTX5-4|ECHDC1;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1 49.93300154707207 0.0405168250806675 3 [Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}[QP]{I|L} 9 5 + 46.243 0.0 0.0 4.2673 4.2673 77.701 0.0 0.0 0.0 20.040203628754668 2.715299873086608 2.715299873086608 4.948704316022713 0 0.5941876774005248 1.5228787452803376 0.0 0.0 [Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}[QP]{I|L};[Q{I|L}]{I|L}P{[QN]|[E{I|L}]|[KN]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{[VA]|[{I|L}G]}[PA];[Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}V[{I|L}A][PA];[Q{I|L}]{I|L}PAAV{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}AA[VP];[Q{I|L}]{I|L}P[Q{I|L}]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}[RV][VP];[Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}V[VG][VP];{[QN]|[E{I|L}]|[KN]}KP[KP]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.2673;3.8106;3.255;3.0503;2.9155;2.6995;2.5905;2.537;2.4947;1.8261 -;-;-;-;-;-;-;-;-;- 585 + 1 1.441 51635.4 1.0 13259 5793 19052 HBL1_DMSO_200M_050219_1,19054 HBL1_DMSO_200M_050219_1,19054,QLLEKVIEL True True QLLEKVIEL 91.462131 542.834704577923 53066320.0 19052.0 nc|ENSG00000093144|Q9NTX5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;;ENSG00000093144|ENST00000454859|ECHDC1;;nc|ENSG00000093144|Q9NTX5-4|ECHDC1 3.970839500427246 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19055 91.463 29.0 3022100.0 25 0 387010.0 + 21926 LPPIKVLVV 9 91 489.3417899938436 976.6690270544872 2 489.3417236208916 MULTI CID FTMS 0 0 0 19052 1935057.0 0.7142246945602873 -1 0.1304702758789062 3 Unmodified _LPPIKVLVV_ ENSG00000056736|ENST00000288167|IL17RB;ENST00000475124.1_1_3:53892553-53899332:+|nuORF 34.10243960390752 0.1078313939113124 3 [{I|L}P]KV{I|L}P{I|L}VV 9 4 + 53.918 0.0 0.0 5.5206 5.5206 83.834 0.0 0.0 0.0 9.978109286651248 22.856668758921824 9.978109286651248 6.989700043360188 0 0.805462187404089 2.0 0.0 0.0 [{I|L}P]KV{I|L}P{I|L}VV;[{I|L}P]KVP{I|L}{I|L}VV;[{I|L}P]KPV{I|L}{I|L}VV;[{I|L}P]PKV{I|L}{I|L}VV;[{I|L}V]KP{I|L}P{I|L}VV;[{I|L}V]KPP{I|L}{I|L}VV 5.5206;4.805;4.1885;3.1222;1.8338;1.1181 -;-;-;-;-;- 666 1 1.441 74060.4 1.0 13260 5793 19052 HBL1_DMSO_200M_050219_1,19055 HBL1_DMSO_200M_050219_1,19055,LPPIKVLVV True True LPPIKVLVV 91.46331 489.341723620892 64905240.0 19052.0 ENST00000475124.1_1_3:53892553-53899332:+|nuORF;;ENSG00000056736|ENST00000288167|IL17RB 4.646178722381592 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19056 91.464 24.0 1457200.0 25 0 422600.0 -1 LRRRPRVYYRI 11 55 530.6537418499129 1588.9393961499386 3 530.6539184451103 MULTI CID FTMS 0 0 0 19052 1768978.5 0.6177466378625847 1 -0.0804977416992187 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LRRRPRVYYRI_ ENST00000254190.3_1_15:101718013-101718115:-|nuORF 0.0948413911109767 0.8747004676205551 3 PYV 3 -1 16.198 0.0 0.0 1.0194 0.0 0.0 692.4294809168842 534.3046969049436 1226.734177821828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PYV 1.0194 - 11 + 1 1.441 38747.8 1.0 13261 5793 19052 HBL1_DMSO_200M_050219_1,19056 HBL1_DMSO_200M_050219_1,19056,LRRRPRVYYRI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19057 91.466 35.0 1490700.0 25 0 65659.0 + + 34374 TTVEDLGSKILL 12 82 644.8718620070698 1287.7291710809395 2 644.8721191287041 MULTI CID FTMS 0 0 0 19052 1531090.875 0.5307189063887866 1 -0.0804977416992187 5 Unmodified _SLTLCLHYLLL_ ENSG00000172270|ENST00000333511|BSG;chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;ENST00000576925.3_1_19:572634-579657:+|nuORF;nc|ENSG00000172270|P35613-2|BSG 41.8396318013385 0.1840573104808743 3 [PS]V{M(Oxidation (M))|F}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}{I|L}{I|L} 11 -1 + 70.067 0.0 0.0 5.4412 5.4412 77.096 0.0 0.0 0.0 1.8830355872139108 4.823263734853114 1.8830355872139108 1.8830355872139108 0 1.9489700043360187 1.0 1.0356668758921828 0.0 [PS]V{M(Oxidation (M))|F}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}TTD{I|L}[SG]K{I|L}{I|L}{I|L};[VG][KT]{I|L}DE{[MG]|[TS]}{I|L}{I|L}{I|L};[VG][KT]{I|L}DEV{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[VG][KT]{I|L}DE{I|L}{[MG]|[TS]}{I|L}{I|L};{[DS]|[MA]|[CV]|TT}VED{I|L}[SG]K{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}ETD{I|L}[SG]K{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WM]{I|L}[SG]K{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[KG]{I|L}DE{[MG]|[TS]}{I|L}{I|L}{I|L};[KS]G{I|L}{I|L}DE{[MG]|[TS]}{I|L}{I|L}{I|L} 5.4412;5.2949;5.1913;5.1818;5.0734;5.0666;4.9727;4.9434;4.7938;4.7925 -;-;-;-;-;-;-;-;-;- 1315 1 1.441 46607.1 1.0 13262 5793 19052 HBL1_DMSO_200M_050219_1,19057 HBL1_DMSO_200M_050219_1,19057,SLTLCLHYLLL False False TTVEDLGSKILL 91.465668 644.872119128704 60798732.0 19052.0 ENSG00000172270|ENST00000333511|BSG;;chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;;ENST00000576925.3_1_19:572634-579657:+|nuORF;;nc|ENSG00000172270|P35613-2|BSG 7.162163416544597 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19058 91.467 74.0 761880.0 25 0 128620.0 + -1 MLCEPAYWFV 10 86 666.2934485303851 1330.5723441275702 2 666.2940551638603 MULTI CID FTMS 0 0 0 19052 599499.375 0.8043457187497275 1 -0.0804977416992187 6 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LC(Carbamidomethyl (C))EPAYWFV_ REV__ENSG00000162434|ENST00000342505|JAK1 11.640296217721598 0.652229146672156 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L}C 8 -1 60.015 0.0 0.0 4.5105 0.0 0.0 0.0 380.1284714071202 380.1284714071202 41.827665712010216 0.0 0.0 0.0 0 0.805462187404089 1.3010299956639813 0.0 1.274227503252014 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L}C 4.5105 - 183 1 1.441 44328.0 1.0 13263 5793 19052 HBL1_DMSO_200M_050219_1,19058 HBL1_DMSO_200M_050219_1,19058,MLCEPAYWFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19059 91.471 170.0 734700.0 25 0 44559.0 -1 0 121 782.3614610059393 2344.062553618018 3 782.6962158083916 MULTI CID FTMS 0 0 0 19052 493401.5625 0.5514398097851617 1 -0.0804977416992187 7 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 64.949 0.0 0.0 2.7708 0.0 0.0 0.0 1303.4487523381663 1303.4487523381663 30.418541533512222 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.2887254899964357 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.7708 - 5221 1 1.441 97695.5 1.0 13264 5793 19052 HBL1_DMSO_200M_050219_1,19059 HBL1_DMSO_200M_050219_1,19059, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19060 91.474 179.0 458410.0 25 0 34095.0 + 35432 STLHLVLRL 9 102 351.2258024463099 1050.6555779391297 3 351.2256652712822 MULTI CID FTMS 0 0 0 19052 467637.125 0.0116145092996122 13 -1.4339141845703125 8 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 30.63653989081413 0.1413794767160703 3 {[MG]|[TS]}{I|L}H{I|L}V{I|L}R{I|L} 9 0 + 45.672 0.0 0.0 4.347 4.347 75.222 0.0 0.0 0.0 21.23503163448703 9.385927504991614 9.385927504991614 3.0102999566398125 0 0.3054621874040891 0.0 0.0 0.3054621874040891 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}R{I|L};{[MG]|[TS]}{I|L}{I|L}HV{I|L}R{I|L};{[MG]|[TS]}{I|L}H{I|L}{I|L}VR{I|L};{[MG]|[TS]}{I|L}{I|L}H{I|L}VR{I|L};{[MG]|[TS]}{I|L}H{I|L}{I|L}{I|L}{I|L}AA;{[MG]|[TS]}{I|L}{I|L}H{I|L}{I|L}{I|L}AA;{[MG]|[TS]}{I|L}H{I|L}{I|L}{I|L}AA{I|L};{[MG]|[TS]}{I|L}{I|L}H{I|L}{I|L}AA{I|L} 4.347;4.0605;3.774;3.4875;1.8006;1.5141;0.94107;0.65455 +;-;-;-;-;-;-;- + 135 + 1 1.441 70807.8 1.0 13265 5793 19052 HBL1_DMSO_200M_050219_1,19060 HBL1_DMSO_200M_050219_1,19060,STLHLVLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19061 91.476 81.0 210660.0 25 0 13688.0 27075 PEVIQVYI 8 44 480.7738979325904 0 480.7739440798759 PEAK CID FTMS 0 0 0 19052 449780.34375 0.6093490582652844 -1 0.1304702758789062 9 Unmodified _PEVIQVYI_ ENST00000467707.1_1_9:128116999-128121864:+|nuORF 5.230669730166228 0.5807325378471833 3 AV 2 7 8.5835 0.0 0.0 0.89455 0.0 0.0 563.3321453751433 223.0721377008422 786.4042830759855 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AV 0.89455 - 5 + 1 1.441 18997.0 1.0 13266 5793 19052 HBL1_DMSO_200M_050219_1,19061 HBL1_DMSO_200M_050219_1,19061,PEVIQVYI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19062 91.479 142.0 169800.0 25 0 13498.0 + 22622 LPYLVPKL 8 52 471.8050769862165 941.595601039233 2 471.8050414919853 MULTI CID FTMS 0 0 0 19052 442015.625 0.1882828824749549 3 -0.308837890625 10 Unmodified _LPYLVPKL_ ENSG00000089154|ENST00000300648|GCN1 38.15118350030904 0.2652218139009398 3 {I|L}{M(Oxidation (M))|F}{I|L}{I|L}VPK{I|L} 8 2 + 39.105 0.0 0.0 4.1531 4.1531 85.581 0.0 0.0 0.0 27.11548792976544 9.719712763997563 9.719712763997563 39.10518797312562 0 0.6989700043360187 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}{I|L}{I|L}VPK{I|L} 4.1531 - 30 + 1 1.441 27910.2 1.0 13267 5793 19052 HBL1_DMSO_200M_050219_1,19062 HBL1_DMSO_200M_050219_1,19062,LPYLVPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19063 91.481 101.0 1200100.0 25 0 204000.0 + 14966 ILPKILQDV 9 118 519.831532010673 1037.6485110881458 2 519.8319579958916 MULTI CID FTMS 0 0 0 19052 460283.6875 0.7763073454550974 -1 0.1304702758789062 11 Unmodified _ILPKILQDV_ ENSG00000120333|ENST00000476371|MRPS14 96.36657018975838 0.0123932121270252 3 {I|L}{I|L}PK{I|L}{I|L}QDV 9 0 + 92.865 0.0 0.0 8.9496 8.9496 94.411 0.0 0.0 0.0 36.47817481888638 13.452266673433144 13.452266673433144 9.208187539523747 0 1.579689690656103 2.0 1.0771412119639845 0.8494850021680094 + + {I|L}{I|L}PK{I|L}{I|L}QDV;{I|L}{I|L}PK{I|L}{I|L}[AG]DV;{I|L}{I|L}PK{I|L}{I|L}DN{I|L};{I|L}{I|L}PK{I|L}{I|L}{[CA]|SS}[PA] 8.9496;8.0622;7.6531;6.5456 +;-;-;- + 863 + 1 1.441 99206.0 1.0 13268 5793 19052 HBL1_DMSO_200M_050219_1,19063 HBL1_DMSO_200M_050219_1,19063,ILPKILQDV True True ILPKILQDV 91.481071 519.8327 4471660.0 19052.0 ENSG00000120333|ENST00000476371|MRPS14 3.2126349608103437 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19064 91.483 104.0 585360.0 25 0 89649.0 + 33759 SLAQYLINA 9 101 496.77459064344686 0 496.7745849490166 PEAK CID FTMS 0 0 0 19052 357859.21875 0.688051541010209 -1 0.1304702758789062 12 Unmodified _SLAQYLINA_ ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3 41.8396318013385 0.053988301646488 3 {I|L}YQAD 5 7 23.805 0.0 0.0 2.4008 0.0 0.0 316.1761821640437 82.06682764224843 398.24300980629215 0.0 0.0 0.0 0.0 0 0.0 0.0 1.5044321917401078 0.0 {I|L}YQAD 2.4008 - 305 + 1 1.441 56173.4 1.0 13269 5793 19052 HBL1_DMSO_200M_050219_1,19064 HBL1_DMSO_200M_050219_1,19064,SLAQYLINA True True SLAQYLINA 91.483289 496.774584949017 4374792.5 19052.0 nc|ENSG00000183570|P57721-5|PCBP3;;ENSG00000183570|ENST00000681687|PCBP3;;nc|ENSG00000183570|P57721-3|PCBP3;;nc|ENSG00000183570|P57721-2|PCBP3;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000183570|P57721-4|PCBP3 3.580716133117676 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19065 91.486 119.0 593410.0 25 0 45867.0 + 30806 RIIDSLFNTV 10 90 589.3332550780821 1176.651957222964 2 589.3329955935478 MULTI CID FTMS 0 0 0 19052 343456.03125 0.5390754672781679 -1 0.1304702758789062 13 Unmodified _RIIDSLFNTV_ ENSG00000109814|ENST00000316423|UGDH;nc|ENSG00000109814|O60701-2|UGDH;nc|ENSG00000109814|O60701-3|UGDH 33.4449034751529 0.2267874087365337 3 {[TV]|[{I|L}S]}D[R{I|L}]{I|L}{M(Oxidation (M))|F}N{[TV]|[{I|L}S]} 10 4 + 55.563 0.0 0.0 4.7221 4.7221 54.724 0.0 0.0 0.0 0.0 7.269987279362624 0.0 0.0 0 0.8807196863200843 1.154901959985743 1.031234684152075 0.0 {[TV]|[{I|L}S]}D[R{I|L}]{I|L}{M(Oxidation (M))|F}N{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]{I|L}{M(Oxidation (M))|F}N{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}N{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]{I|L}{M(Oxidation (M))|F}GG{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}D[R{I|L}]{I|L}{M(Oxidation (M))|F}GG{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}GG{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}[RV]S{I|L}{M(Oxidation (M))|F}N{[TV]|[{I|L}S]};{[QS]|[NT]}{M(Oxidation (M))|F}{I|L}{I|L}[KQ]N{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}[RV]S{I|L}{M(Oxidation (M))|F}GG{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}V][WR]{I|L}{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]} 4.7221;4.7221;4.378;3.9433;3.9433;3.5991;2.9521;2.275;2.1732;1.2613 -;-;-;-;-;-;-;-;-;- 172 1 1.441 55427.4 1.0 13270 5793 19052 HBL1_DMSO_200M_050219_1,19065 HBL1_DMSO_200M_050219_1,19065,RIIDSLFNTV False True RIIDSLFNTV 91.485766 589.332995593548 4112940.0 19052.0 nc|ENSG00000109814|O60701-3|UGDH;;nc|ENSG00000109814|O60701-2|UGDH;;ENSG00000109814|ENST00000316423|UGDH 6.850222905476888 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19066 91.489 146.0 395070.0 25 0 42757.0 + 35947 SVPIVTTDRR 10 83 572.325750660838 1142.636948388476 2 572.8267700076103 MULTI CID FTMS 0 0 0 19052 272280.4375 0.4994224497165556 1 -0.0804977416992187 14 Unmodified _SVPIVTTDRR_ REV__ENSG00000127241|ENST00000296280|MASP1;REV__nc|ENSG00000127241|P48740-4|MASP1 14.838274106304384 0.5985701837916485 3 [VP]S{I|L}VSN{I|L} 8 -1 48.507 0.0 0.0 4.2452 0.0 0.0 0.0 330.1485440095116 330.1485440095116 34.29870120485763 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.9291746928241125 0.0 [VP]S{I|L}VSN{I|L} 4.2452 - 553 1 1.441 49017.5 1.0 13271 5793 19052 HBL1_DMSO_200M_050219_1,19066 HBL1_DMSO_200M_050219_1,19066,SVPIVTTDRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19067 91.493 247.0 443870.0 25 0 60996.0 + 3738 DAFTFRHFL 9 123 385.1978412125342 1152.5716942378026 3 385.1974059939384 MULTI CID FTMS 0 0 0 19052 261413.078125 0.7592491190580438 -1 0.1304702758789062 15 Unmodified _DAFTFRHFL_ ENSG00000167487|ENST00000300976|KLHL26 17.44264345198275 0.3645313841742926 3 {[DA]|[EG]}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}RH{M(Oxidation (M))|F}{I|L} 9 0 + 52.349 0.0 0.0 4.5419 4.5419 74.812 0.0 0.0 0.0 16.98970004336018 2.430380486862944 2.430380486862944 2.430380486862944 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}RH{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}RH{I|L}{M(Oxidation (M))|F};W{M(Oxidation (M))|F}T{M(Oxidation (M))|F}[VG]H{M(Oxidation (M))|F}{I|L};W{M(Oxidation (M))|F}T{M(Oxidation (M))|F}[VG]H{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}T[{M(Oxidation (M))|F}V]{NN|[MP]|[D{I|L}]|[EV]}{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}T[{M(Oxidation (M))|F}V]{NN|[MP]|[D{I|L}]|[EV]}{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}T{I|L}[{M(Oxidation (M))|F}V]{NN|[MP]|[D{I|L}]|[EV]}{I|L};W{M(Oxidation (M))|F}{I|L}[YQ]H{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}T[WK]R{[ET]|[MV]};W{M(Oxidation (M))|F}{I|L}[YQ]H{I|L}{M(Oxidation (M))|F} 4.5419;4.3311;3.0679;2.857;2.83;2.7608;2.5882;2.5058;2.4796;2.2949 +;-;-;-;-;-;-;-;-;- + 456 + 1 1.441 91481.0 1.0 13272 5793 19052 HBL1_DMSO_200M_050219_1,19067 HBL1_DMSO_200M_050219_1,19067,DAFTFRHFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19068 91.499 341.0 232830.0 25 0 37010.0 18700 LAIWEASL 8 98 451.75254133747273 901.4905297417456 2 451.7525817751884 MULTI CID FTMS 0 0 0 19052 214298.71875 0.0091848587854878 62 -6.878456115722656 16 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 42.96799951952854 0.1846367511955703 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 3 52.44 0.0 0.0 5.817 0.0 0.0 0.0 199.10824274357552 199.10824274357552 32.19396287239803 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 5.817 - 238 1 1.441 67269.0 1.0 13273 5793 19052 HBL1_DMSO_200M_050219_1,19068 HBL1_DMSO_200M_050219_1,19068,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19069 91.505 308.0 369830.0 25 0 47131.0 + 16198 IVIPTDLERL 10 100 584.8500800300353 1167.6856071268703 2 584.8501464724541 MULTI CID FTMS 0 0 0 19052 201663.0625 0.8008891020770226 -1 0.1304702758789062 17 Unmodified _IVIPTDLERL_ ENSG00000136874|ENST00000259400|STX17;ENST00000533696.5_1_9:102677473-102691149:+|nuORF 49.52724829834842 0.0829255630816734 3 {I|L}V{I|L}PTD{I|L}ER{I|L} 10 0 + 104.19 0.0 0.0 8.9227 8.9227 97.419 0.0 0.0 0.0 92.768764080017 11.53212513775344 11.53212513775344 21.58870936703728 0 0.9247425010840048 1.6989700043360187 0.4247425010840047 0.3807196863200844 + + {I|L}V{I|L}PTD{I|L}ER{I|L};{I|L}V{I|L}PTD{I|L}[W{I|L}]V;{I|L}V{I|L}{I|L}[{I|L}P][WE]SV;{I|L}V{I|L}P{I|L}{I|L}[WE]SV 8.9227;7.0738;4.2091;4.1676 +;-;-;- + 308 + 1 1.441 88778.7 1.0 13274 5793 19052 HBL1_DMSO_200M_050219_1,19069 HBL1_DMSO_200M_050219_1,19069,IVIPTDLERL True True IVIPTDLERL 91.505081 584.850146472454 2807824.25 19052.0 ENSG00000136874|ENST00000259400|STX17;;ENST00000533696.5_1_9:102677473-102691149:+|nuORF 4.991831223169963 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19070 91.508 139.0 455450.0 25 0 82625.0 + 10029 FPMMRSPFV 9 76 556.2744132198225 1110.5342735064448 2 556.2751342654228 MULTI CID FTMS 0 0 0 19052 185201.40625 0.1019370962899196 4 -0.4393844604492187 18 Unmodified _FPMMRSPFV_ REV__ENST00000169298.7_1_3:186793899-186793989:+|nuORF 19.256988751693697 0.3154191944385105 3 [{I|L}V][WD]A{M(Oxidation (M))|F}D{M(Oxidation (M))|F}V 9 -1 + 54.359 0.0 0.0 4.8948 4.8948 85.697 0.0 0.0 0.0 3.2121122500096533 21.25946806341253 3.2121122500096533 12.762064119389493 0 0.8494850021680094 1.0969100130080565 0.0 0.0 [{I|L}V][WD]A{M(Oxidation (M))|F}D{M(Oxidation (M))|F}V;[KG][QA]EA{M(Oxidation (M))|F}D{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[RD]A{M(Oxidation (M))|F}D{M(Oxidation (M))|F}V;[{I|L}V]{[DS]|[MA]|[CV]|TT}[WM]D{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{M(Oxidation (M))|F}YY{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{M(Oxidation (M))|F}[KP]PC{I|L};{[QN]|[E{I|L}]|[KN]}[RD][W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{M(Oxidation (M))|F}YYV{I|L};[{I|L}V]{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}Y[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[KP]{M(Oxidation (M))|F}Y[EP] 4.8948;3.7456;3.7233;3.4774;2.0785;2.0278;1.7226;1.3572;1.1113;1.0653 -;-;-;-;-;-;-;-;-;- 264 1 1.441 53288.1 1.0 13275 5793 19052 HBL1_DMSO_200M_050219_1,19070 HBL1_DMSO_200M_050219_1,19070,FPMMRSPFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19071 91.522 800.0 136530.0 25 0 7352.5 -1 0 132 1088.5118447264394 2175.009136519679 2 1088.512866199017 MULTI CID FTMS 0 0 0 19052 156099.8125 1.0 0 0.0 19 3 ADAMS{I|L}DG{[CT]|[{M(Oxidation (M))|F}G]}VY{I|L}A[KG] 16 -1 70.889 0.0 0.0 3.2592 0.0 0.0 561.2227118144041 0.0 561.2227118144041 0.0 33.857828494520696 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 ADAMS{I|L}DG{[CT]|[{M(Oxidation (M))|F}G]}VY{I|L}A[KG] 3.2592 - 8137 + 1 1.441 74901.8 0.8199999928474426 13276 5793 19052 HBL1_DMSO_200M_050219_1,19071 HBL1_DMSO_200M_050219_1,19071, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19072 91.537 800.0 159000.0 25 0 17351.0 -1 0 145 668.6757406548495 2003.0053925647485 3 669.0106689333916 MULTI CID FTMS 0 0 0 19052 168640.875 1.0 0 0.0 20 3 P{I|L}VE[R{I|L}] 6 -1 25.406 0.0 0.0 1.2684 0.0 0.0 1277.561669821156 0.0 1277.561669821156 0.0 -4.527125341097946 -4.527125341097946 0.0 0 0.0 0.0 0.0 0.0 P{I|L}VE[R{I|L}] 1.2684 - 894 + 1 1.441 102437.9 0.7699999809265137 13277 5793 19052 HBL1_DMSO_200M_050219_1,19072 HBL1_DMSO_200M_050219_1,19072, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19074 91.541 18.0 2933700.0 25 0 381840.0 + 21683 LPLPHFDTI 9 81 526.7925889054437 1051.5706248776874 2 526.7928954958916 MULTI CID FTMS 0 0 0 19073 2516837.25 0.3968256702424017 2 -0.2283401489257812 1 Unmodified _LPLPHFDTI_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 49.55428908609986 0.0413471690215031 3 [{I|L}P]HP{M(Oxidation (M))|F}DT{I|L}{I|L} 9 3 + 65.077 0.0 0.0 6.1885 6.1885 80.32 0.0 0.0 0.0 3.8912967426217904 22.10795294801265 3.8912967426217904 2.442190502882156 0 0.8807196863200843 2.0 0.5 0.0 [{I|L}P]HP{M(Oxidation (M))|F}DT{I|L}{I|L};[{I|L}P]HP{M(Oxidation (M))|F}D{I|L}T{I|L};[{I|L}P]{I|L}[HM]DT{I|L}{I|L};[{I|L}P]{I|L}[HM]D{I|L}T{I|L};[{I|L}P]H{[{M(Oxidation (M))|F}D]|MM}TP{I|L}{I|L};[{I|L}P]H{[{M(Oxidation (M))|F}D]|MM}PT{I|L}{I|L};[{I|L}P]H{[{M(Oxidation (M))|F}D]|MM}P{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}DT{I|L}P{I|L}{I|L};{[{M(Oxidation (M))|F}D]|MM}HPT{I|L}P{I|L}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}DPT{I|L}P{I|L}{I|L} 6.1885;5.9563;5.9072;5.6749;4.8566;4.6917;4.4595;4.4298;4.2623;4.2623 -;-;-;-;-;-;-;-;-;- 415 1 1.441 47020.8 1.0 13278 5794 19073 HBL1_DMSO_200M_050219_1,19074 HBL1_DMSO_200M_050219_1,19074,LPLPHFDTI True True LPLPHFDTI 91.541385 526.792895495892 70470584.0 19073.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 5.854929288228353 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19075 91.543 25.0 2612900.0 25 0 197630.0 + 44976 YPRLSIPNL 9 79 536.8111891018779 1071.6078252705556 2 536.8118774294853 MULTI CID FTMS 0 0 0 19073 1502155.125 0.6050949920166525 2 -0.2283401489257812 2 Unmodified _YPRLSIPNL_ ENSG00000242265|ENST00000612748|PEG10;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 36.12702656103203 0.0967173616627612 3 VDPN{I|L} 5 6 27.875 0.0 0.0 2.6013 0.0 0.0 515.3065663068375 0.0 515.3065663068375 0.0 12.051949423865087 0.0 0.0 0 0.9929928190999392 0.0 0.3252574989159953 0.0 VDPN{I|L} 2.6013 - 153 1 1.441 60344.2 1.0 13279 5794 19073 HBL1_DMSO_200M_050219_1,19075 HBL1_DMSO_200M_050219_1,19075,YPRLSIPNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19076 91.544 48.0 1032600.0 25 0 168260.0 + 26523 NVIDNLIVA 9 70 485.78227411203727 969.5499952908746 2 485.7822143435478 MULTI CID FTMS 0 0 0 19073 941256.1875 0.007806932542873 14 -1.5840988159179688 3 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 36.12702656103203 0.0967173616627612 3 {[NV]|[RG]}EVN{I|L} 6 5 28.689 0.0 0.0 2.9591 0.0 0.0 0.0 298.1777404096468 298.1777404096468 13.767959391884546 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 {[NV]|[RG]}EVN{I|L} 2.9591 - 420 1 1.441 43254.4 1.0 13280 5794 19073 HBL1_DMSO_200M_050219_1,19076 HBL1_DMSO_200M_050219_1,19076,NVIDNLIVA True True NVIDNLIVA 91.543841 485.782214343548 4231683840.0 19073.0 ENSG00000143621|ENST00000361891|ILF2 5.460630098978679 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19077 91.546 76.0 688180.0 25 0 83249.0 + 45109 YPYPYPHTLYL 11 73 713.8559261893067 1425.6972994454134 2 714.3581420779228 MULTI CID FTMS 0 0 0 19073 609053.125 1.0 0 0.0 4 Unmodified _YPYPYPHTLYL_ ENSG00000116221|ENST00000360840|MRPL37 36.12702656103203 0.2720571796884491 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}YE{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 11 6 + 73.04 0.0 0.0 5.1231 5.1231 88.059 0.0 0.0 0.0 25.86243567393427 54.80259828933835 25.86243567393427 25.10335668235292 0 0.4247425010840047 2.0 1.1861818737241734 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}YE{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[PG]{I|L}Y{M(Oxidation (M))|F}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YA[VP]Y{M(Oxidation (M))|F}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}{M(Oxidation (M))|F}{I|L}YE{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}YPYE{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}Y{I|L}{M(Oxidation (M))|F}E{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}YE{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}{[QN]|[E{I|L}]|[KN]}Y{M(Oxidation (M))|F}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP]{M(Oxidation (M))|F}{I|L}Y{M(Oxidation (M))|F}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VP]Y{M(Oxidation (M))|F}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 5.1231;3.3623;3.2747;3.2312;3.1753;2.6662;2.1948;1.3828;1.2034;0.34637 -;-;-;-;-;-;-;-;-;- 332 1 1.441 41899.7 1.0 13281 5794 19073 HBL1_DMSO_200M_050219_1,19077 HBL1_DMSO_200M_050219_1,19077,YPYPYPHTLYL False True YPYPYPHTLYL 91.545601 713.8571 36461664.0 19073.0 ENSG00000116221|ENST00000360840|MRPL37 7.185978253682454 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19078 91.548 104.0 618490.0 25 0 91570.0 + 39594 DALDVANKIGII 12 92 621.3578322744459 1240.7011116156916 2 621.3590576052666 MULTI CID FTMS 0 0 0 19073 461483.8125 0.004068416293088 -4 0.4089584350585937 5 Unmodified _VDDALNKQLLL_ ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF 31.26834338654808 0.3580123756476716 3 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L} 12 7 + 85.962 0.0 0.0 6.9285 6.9285 84.632 0.0 0.0 0.0 7.644583501388283 7.447274948966935 7.447274948966935 3.6227313277985473 0 2.2134679910804405 1.6989700043360187 0.3807196863200844 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVAN[K{I|L}]G{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}VDA{I|L}{I|L}EG{I|L}{I|L};{[VA]|[{I|L}G]}EDVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}VEVA{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVAN[K{I|L}]G{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}DVAGG[K{I|L}]G{I|L}{I|L} 6.9285;6.6365;6.3314;6.3124;5.8583;5.7748;5.7564;5.7387;5.7152;5.657 -;-;-;-;-;-;-;-;-;- 4511 1 1.441 54025.5 1.0 13282 5794 19073 HBL1_DMSO_200M_050219_1,19078 HBL1_DMSO_200M_050219_1,19078,VDDALNKQLLL False True DALDVANKIGII 91.547837 621.359057605267 5544735360.0 19073.0 ENST00000471152.1_2_3:161146917-161147007:-|nuORF;;ENSG00000198242|ENST00000422514|RPL23A;;ENST00000467573.1_1_21:40499576-40499963:+|nuORF 5.241628964742024 2.0 False 12.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19079 91.55 73.0 877470.0 25 0 128590.0 310 ADVLLVGSEAF 11 85 560.7967231285738 0 560.7967407107353 PEAK CID FTMS 0 0 0 19073 466332.09375 1.0 0 0.0 6 Unmodified _ADVLLVGSEAF_ ENSG00000167930|ENST00000399932|FAM234A;nc|ENSG00000167930|Q9H0X4-2|FAM234A 10.799506525563784 0.4428795054024277 3 {I|L}V{I|L} 3 9 26.198 0.0 0.0 2.34 0.0 0.0 285.1346676008207 506.1859835260376 791.3206511268583 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}V{I|L} 2.34 - 70 + 1 1.441 54596.2 1.0 13283 5794 19073 HBL1_DMSO_200M_050219_1,19079 HBL1_DMSO_200M_050219_1,19079,ADVLLVGSEAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19080 91.552 108.0 446350.0 25 0 41335.0 + 10155 FPYAFKEVI 9 89 557.3024624752268 1112.5903720172537 2 557.3028442263603 MULTI CID FTMS 0 0 0 19073 332952.96875 0.1524101339819384 -3 0.34283447265625 7 Unmodified _FPYAFKEVI_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 32.78568957990786 0.1150597335874693 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F} 4 6 37.536 0.0 0.0 3.3737 0.0 0.0 0.0 631.3435818163347 631.3435818163347 15.409393809954892 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F} 3.3737 - 407 1 1.441 44270.9 1.0 13284 5794 19073 HBL1_DMSO_200M_050219_1,19080 HBL1_DMSO_200M_050219_1,19080,FPYAFKEVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19081 91.557 263.0 319320.0 25 0 76718.0 + 45937 YYYDPLAGTYY 11 99 694.8058883519897 1387.5972237707792 2 695.3075439333916 MULTI CID FTMS 0 0 0 19073 306703.375 0.2929811627699263 -2 0.210968017578125 8 Unmodified _YYYDPLAGTYY_ ENSG00000004534|ENST00000266022|RBM6;ENST00000434592.5_1_3:50097096-50127827:+|nuORF;ENST00000441115.5_1_3:50012785-50103056:+|nuORF;nc|ENSG00000004534|P78332-2|RBM6 27.628801355627647 0.4434699450731472 3 YYDYP{I|L}A 7 6 37.897 0.0 0.0 2.7311 0.0 0.0 0.0 499.1829902138471 499.1829902138471 9.190388485692644 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 YYDYP{I|L}A 2.7311 - 1052 1 1.441 66217.8 1.0 13285 5794 19073 HBL1_DMSO_200M_050219_1,19081 HBL1_DMSO_200M_050219_1,19081,YYYDPLAGTYY False True YYYDPLAGTYY 91.556726 694.8065 19402634.0 19073.0 nc|ENSG00000004534|P78332-2|RBM6;;ENSG00000004534|ENST00000266022|RBM6;;ENST00000434592.5_1_3:50097096-50127827:+|nuORF;;ENST00000441115.5_1_3:50012785-50103056:+|nuORF 6.932086149851481 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19082 91.559 132.0 611670.0 25 0 42416.0 + 35416 STIRLLTSL 9 122 502.3119414277781 1002.609329922356 2 502.3132202029228 MULTI CID FTMS 0 0 0 19073 327281.3125 0.0299565895262561 9 -1.03472900390625 9 Unmodified _STIRLLTSL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 49.52724829834842 0.0414064571532091 3 {I|L}{I|L}TS{I|L} 5 4 41.37 0.0 0.0 4.1262 0.0 0.0 457.2654591291032 0.0 457.2654591291032 0.0 19.81090231437648 0.0 0.0 0 1.305462187404089 0.0 0.4247425010840047 0.0 + {I|L}{I|L}TS{I|L} 4.1262 + + 184 1 1.441 65972.8 1.0 13286 5794 19073 HBL1_DMSO_200M_050219_1,19082 HBL1_DMSO_200M_050219_1,19082,STIRLLTSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19083 91.561 71.0 424940.0 25 0 43921.0 + -1 ALPWMMVTV 9 69 540.2665068960231 1078.518460858846 2 540.2659789919853 MULTI CID FTMS 0 0 0 19073 254595.9375 0.1082200461919091 -2 0.210968017578125 10 2 Oxidation (M) _ALPWM(Oxidation (M))M(Oxidation (M))VTV_ REV__ENSG00000141699|ENST00000309428|RETREG3;REV__nc|ENSG00000141699|Q86VR2-2|RETREG3 13.50788311687929 0.4710407108020397 3 TV 2 -1 14.481 0.0 0.0 1.3427 0.0 0.0 860.3921161096258 0.0 860.3921161096258 0.0 3.222237044759206 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 TV 1.3427 + + 32 + 1 1.441 31283.6 1.0 13287 5794 19073 HBL1_DMSO_200M_050219_1,19083 HBL1_DMSO_200M_050219_1,19083,ALPWMMVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19084 91.568 408.0 289440.0 25 0 68217.0 36706 TDFKALLI 8 123 460.7764618908724 919.5383708485448 2 460.7768737673759 MULTI CID FTMS 0 0 0 19073 199416.296875 0.6334253562056428 -2 0.210968017578125 11 Unmodified _TDFKALLI_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 38.15118350030904 0.2652218139009398 3 {I|L}{I|L}AY{[QS]|[NT]}V 7 8 25.411 0.0 0.0 2.7634 0.0 0.0 0.0 142.0732356987468 142.0732356987468 8.355158699542429 0.0 0.0 0.0 0 0.7742275032520141 1.3979400086720375 0.8494850021680094 0.0 {I|L}{I|L}AY{[QS]|[NT]}V 2.7634 - 933 1 1.441 93329.2 1.0 13288 5794 19073 HBL1_DMSO_200M_050219_1,19084 HBL1_DMSO_200M_050219_1,19084,TDFKALLI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19085 91.575 365.0 263660.0 25 0 33911.0 + 29338 QIRSKGHFLQ 10 99 607.3457089707479 1212.6768650082956 2 607.3456298708916 MULTI CID FTMS 0 0 0 19073 184536.109375 1.0 0 0.0 12 Unmodified _QIRSKGHFLQ_ REV__ENSG00000099937|ENST00000215727|SERPIND1 13.90604991867851 0.6142120002215601 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}Q 4 -1 39.055 0.0 0.0 3.2205 0.0 0.0 0.0 734.4110013210487 734.4110013210487 21.962080321228928 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5866968715561641 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}Q 3.2205 - 232 1 1.441 72552.7 1.0 13289 5794 19073 HBL1_DMSO_200M_050219_1,19085 HBL1_DMSO_200M_050219_1,19085,QIRSKGHFLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19086 91.589 800.0 112890.0 25 0 34139.0 -1 LRRRPRVYYRI 11 109 795.4769442392586 1588.9393355453171 2 795.4763671755791 MULTI CID FTMS 0 0 0 19073 176489.9375 0.4441871207176422 2 -0.2283401489257812 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LRRRPRVYYRI_ ENST00000254190.3_1_15:101718013-101718115:-|nuORF 0.0 0.8751479354844584 3 {I|L} 1 -1 9.2694 0.0 0.0 0.58337 0.0 0.0 1457.8441950197296 0.0 1457.8441950197296 0.0 3.784809756568528 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.58337 + + 36 + 1 1.441 73160.6 0.8799999952316284 13290 5794 19073 HBL1_DMSO_200M_050219_1,19086 HBL1_DMSO_200M_050219_1,19086,LRRRPRVYYRI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19087 91.603 800.0 200800.0 25 0 17524.0 13739 HRGATDLPGQ 10 118 1051.5256665149648 1050.5183900483648 1 1053.530200183392 MULTI CID FTMS 0 0 0 19073 200703.953125 0.4997659338690034 6 -0.6775054931640625 14 Unmodified _HRGATDLPGQ_ ENST00000275569.8_1_7:76239477-76254863:-|nuORF 18.373094154950223 0.5392593366289069 3 [MN][HK]T{M(Oxidation (M))|F}Y 7 9 32.484 0.0 0.0 3.0922 0.0 0.0 0.0 126.06372534370998 126.06372534370998 5.034197122651527 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.7742275032520141 0.0 [MN][HK]T{M(Oxidation (M))|F}Y 3.0922 - 6212 1 1.441 104780.7 0.9200000166893004 13291 5794 19073 HBL1_DMSO_200M_050219_1,19087 HBL1_DMSO_200M_050219_1,19087,HRGATDLPGQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19088 91.605 133.0 399190.0 25 0 33324.0 + 33636 SISAHGPPRAN 11 102 553.7913493282846 0 553.7905761599541 PEAK CID FTMS 0 0 0 19073 173220.578125 0.2854985618605966 10 -1.086761474609375 15 Unmodified _SISAHGPPRAN_ REV__ENST00000382159.7_1_19:2511592-2511901:-|nuORF 24.99096001346401 0.2903797476557471 3 PPR 3 -1 20.445 0.0 0.0 1.8493 0.0 0.0 552.2610911352816 200.06794153385 752.3290326691316 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 PPR 1.8493 + + 42 + 1 1.441 45673.5 1.0 13292 5794 19073 HBL1_DMSO_200M_050219_1,19088 HBL1_DMSO_200M_050219_1,19088,SISAHGPPRAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19089 91.608 130.0 565330.0 25 0 64228.0 44703 YPGMNKREV 9 112 547.2755142151176 1092.536475497035 2 547.2765991091728 MULTI CID FTMS 0 0 0 19073 157113.78125 1.0 0 0.0 16 Unmodified _YPGMNKREV_ ENSG00000000938|ENST00000374005|FGR 7.910154910731844 0.6385446671287552 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L}[KT]W[DN] 9 5 + 26.321 0.0 0.0 2.4092 2.4092 73.994 0.0 0.0 0.0 4.525618827129282 0.0794677291997238 0.0794677291997238 5.28273777167043 0 0.0 1.0969100130080565 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L}[KT]W[DN];[{I|L}V]N[VP]HW[DN];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L}[KT]{[DA]|[EG]}[DN];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[KT][W{I|L}][DN];[{I|L}V]GG[VP]HW[DN];[{I|L}V]N[VP]H{[DA]|[EG]}[DN];[{I|L}V]N[YG][W{I|L}][DN];[VS]M{I|L}[KT]W[DN];{[MS]|[{M(Oxidation (M))|F}A]}V{I|L}[KT]W[DN];{[TV]|[{I|L}S]}{[ET]|[MV]}[KT]W[DN] 2.4092;1.9257;1.5664;1.1296;1.0828;1.0828;1.0828;0.45199;0.41741;0.21346 -;-;-;-;-;-;-;-;-;- 223 1 1.441 61457.8 1.0 13293 5794 19073 HBL1_DMSO_200M_050219_1,19089 HBL1_DMSO_200M_050219_1,19089,YPGMNKREV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19090 91.615 294.0 411680.0 25 0 44196.0 + 29725 QPLPVILHV 9 148 508.318790644387 1014.623028355574 2 508.3202392458916 MULTI CID FTMS 0 0 0 19073 154974.71875 0.0081980852893364 14 -1.5840988159179688 17 Unmodified _QPLPVILHV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 49.66892048692302 0.0410958345688192 3 [QP]{I|L}PV{I|L}{I|L}HV 9 0 + 48.594 0.0 0.0 4.7893 4.7893 73.827 0.0 0.0 0.0 1.3021124171160636 7.469617958179242 1.3021124171160636 1.3021124171160636 0 0.6989700043360187 0.0 0.0 0.0 + + [QP]{I|L}PV{I|L}{I|L}HV;[VP]{I|L}{I|L}H{I|L}QPV;[QP]{I|L}VP{I|L}{I|L}HV;[QP]{I|L}PV{I|L}{I|L}VH;[QP]{I|L}PV{I|L}HV{I|L};[QP]{I|L}PV{I|L}H{I|L}V;[VP]{I|L}{I|L}H{I|L}[AG]PV;[QP]{I|L}VP{I|L}{I|L}VH;[{I|L}P]V{I|L}H{I|L}QPV;[QP]{I|L}VP{I|L}HV{I|L} 4.7893;4.661;4.1004;4.0531;3.9005;3.8037;3.7534;3.3642;3.2405;3.2116 +;-;-;-;-;-;-;-;-;- + 611 + 1 1.441 100422.0 1.0 13294 5794 19073 HBL1_DMSO_200M_050219_1,19090 HBL1_DMSO_200M_050219_1,19090,QPLPVILHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19091 91.629 800.0 154490.0 25 0 12861.0 -1 0 115 1092.5271588897317 2183.039764846264 2 1092.529223620892 MULTI CID FTMS 0 0 0 19073 113888.2578125 0.4574097718664489 13 -1.4372482299804688 18 3 PPPPPP{[QN]|[E{I|L}]|[KN]} 8 -1 54.959 0.0 0.0 2.5175 0.0 0.0 1340.6104088413415 0.0 1340.6104088413415 0.0 15.04524397741944 0.0 0.0 0 1.0 0.0 0.0 1.4604093769761874 PPPPPP{[QN]|[E{I|L}]|[KN]} 2.5175 - 3601 + 1 1.441 80382.1 0.5699999928474426 13295 5794 19073 HBL1_DMSO_200M_050219_1,19091 HBL1_DMSO_200M_050219_1,19091, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19092 91.643 800.0 109740.0 25 0 8297.9 -1 0 129 739.347203593971 2215.019781382113 3 739.6828491091728 MULTI CID FTMS 0 0 0 19073 104990.7421875 1.0 0 0.0 19 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 53.132 0.0 0.0 2.3987 0.0 0.0 0.0 1174.4097709663504 1174.4097709663504 26.96063146421345 0.0 0.0 0.0 0 1.424742501084005 1.3979400086720375 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.3987 - 745 1 1.441 71300.7 0.6000000238418579 13296 5794 19073 HBL1_DMSO_200M_050219_1,19092 HBL1_DMSO_200M_050219_1,19092, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19093 91.656 800.0 154270.0 25 0 17835.0 -1 0 113 953.5671317317748 0 953.4532958865166 PEAK CID FTMS 0 0 0 19073 78518.171875 0.6050935058895663 2 -0.2283401489257812 20 3 M{I|L}P{I|L}QE 6 -1 34.02 0.0 0.0 1.7857 0.0 0.0 952.6103854344492 238.11951624088127 1190.729901675331 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6139829889124311 0.3494850021680094 M{I|L}P{I|L}QE 1.7857 - 1486 + 1 1.441 89166.5 0.5799999833106995 13297 5794 19073 HBL1_DMSO_200M_050219_1,19093 HBL1_DMSO_200M_050219_1,19093, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19095 91.665 288.0 524740.0 25 0 22004.0 -1 0 128 1164.5395707415664 3490.5968828249 3 1164.874316394329 MULTI CID FTMS 0 0 0 19094 575344.6875 0.4600190593648744 1 -0.1088027954101562 1 3 {I|L}VQY{M(Oxidation (M))|F}ANQQAED 12 -1 84.639 0.0 0.0 2.4248 0.0 0.0 1747.8065822129713 333.1317537897094 2080.938336002681 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 1.5356668758921828 {I|L}VQY{M(Oxidation (M))|F}ANQQAED 2.4248 - 32264 + 1 1.458 92479.8 1.0 13298 5795 19094 HBL1_DMSO_200M_050219_1,19095 HBL1_DMSO_200M_050219_1,19095, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19096 91.667 50.0 1011100.0 25 0 186480.0 + 10181 FQDEINWRL 9 50 610.8075564442081 1219.600559955216 2 610.8070556521416 MULTI CID FTMS 0 0 0 19094 751676.625 0.2204858701106592 -1 0.119537353515625 2 Unmodified _FQDEINWRL_ ENSG00000102226|ENST00000377107|USP11;ENST00000469080.5_1_X:47092634-47106681:+|nuORF;nc|ENSG00000102226|P51784|USP11 61.60191391372663 0.0251951588191061 3 {M(Oxidation (M))|F}QDE{I|L}NWR{I|L} 9 0 + 74.202 0.0 0.0 6.0841 6.0841 86.022 0.0 0.0 0.0 7.5719416395323265 7.5719416395323265 7.5719416395323265 7.5719416395323265 0 1.424742501084005 0.0 0.4247425010840047 0.8252574989159953 + + {M(Oxidation (M))|F}QDE{I|L}NWR{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VVN{I|L}EDQE;{M(Oxidation (M))|F}[AG]DE{I|L}NWR{I|L};{M(Oxidation (M))|F}QDE{I|L}GGWR{I|L};{M(Oxidation (M))|F}QDE{I|L}RR{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DERR{I|L}QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VVN{I|L}ED[AG]E;{M(Oxidation (M))|F}QDE{I|L}GGVV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}[AG]DE{I|L}GGWR{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RR{I|L}ED[AG]E 6.0841;5.4632;5.3291;5.3291;5.1745;4.8241;4.7118;4.7118;4.5776;4.4195 +;-;-;-;-;-;-;-;-;- + 134 + 1 1.458 44312.7 1.0 13299 5795 19094 HBL1_DMSO_200M_050219_1,19096 HBL1_DMSO_200M_050219_1,19096,FQDEINWRL True True FQDEINWRL 91.666669 610.807055652142 58887440.0 19094.0 nc|ENSG00000102226|P51784|USP11;;ENST00000469080.5_1_X:47092634-47106681:+|nuORF;;ENSG00000102226|ENST00000377107|USP11 7.484045664469401 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19097 91.668 54.0 1239300.0 25 0 161130.0 + 25757 NIVDKFVIV 9 111 523.8159982991647 0 523.8158447146416 PEAK CID FTMS 0 0 0 19094 553109.0625 0.4892164737476664 1 -0.1088027954101562 3 Unmodified _NIVDKFVIV_ ENSG00000101224|ENST00000245960|CDC25B;nc|ENSG00000101224|P30305-2|CDC25B;nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B 26.268140514670165 0.1442484609216422 3 N{I|L}VYV 5 5 25.165 0.0 0.0 2.4067 0.0 0.0 230.16465264311404 224.1043490045532 454.2690016476672 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 N{I|L}VYV 2.4067 - 540 + 1 1.458 57806.3 1.0 13300 5795 19094 HBL1_DMSO_200M_050219_1,19097 HBL1_DMSO_200M_050219_1,19097,NIVDKFVIV False True NIVDKFVIV 91.668067 523.815844714642 9271865.0 19094.0 nc|ENSG00000101224|P30305-3|CDC25B;;nc|ENSG00000101224|P30305-2|CDC25B;;nc|ENSG00000101224|P30305-4|CDC25B;;ENSG00000101224|ENST00000245960|CDC25B 1.032677412033081 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19098 91.67 73.0 1532300.0 25 0 262920.0 + 15705 IQTAVRLLL 9 123 513.8371812888996 1025.6598096445991 2 513.8379394412041 MULTI CID FTMS 0 0 0 19094 507351.34375 0.4864263172383311 -1 0.119537353515625 4 Unmodified _IQTAVRLLL_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BJ|p.P104Rfs*?|1|0.23|ENSG00000124635|chr6:27132410-27132440|TCGGACACGGCGTGCTTGGCCAACTCCCCAG/-|frameshift_variant;HIST1H2BJ|p.P104T|1|0.48|ENSG00000124635|chr6:27132441-27132441|G/T|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18 96.36657018975838 0.0123932121270252 3 {I|L}QTAVR{I|L}{I|L}{I|L} 9 0 + 75.377 0.0 0.0 7.3491 7.3491 94.585 0.0 0.0 0.0 50.51919948355536 12.866385355227834 12.866385355227834 19.665762445130497 0 1.8182503180159344 1.0457574905606752 0.8807196863200843 0.3807196863200844 + + {I|L}QTAVR{I|L}{I|L}{I|L};{I|L}[AG]TAVR{I|L}{I|L}{I|L};{I|L}ATGAVR{I|L}{I|L}{I|L};{I|L}QTAKK[KP]{I|L};{I|L}ATQVR{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}Q{I|L}{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}{I|L}Q{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}[AG]{I|L}{I|L} 7.3491;5.4317;5.255;5.1256;4.3744;3.6043;3.3065;3.2554;2.7065;2.4087 +;-;-;-;-;-;-;-;-;- + 1396 + 1 1.458 91504.7 1.0 13301 5795 19094 HBL1_DMSO_200M_050219_1,19098 HBL1_DMSO_200M_050219_1,19098,IQTAVRLLL True True IQTAVRLLL 91.669788 513.837939441204 10552762.0 19094.0 HIST1H2BJ|p.P104Rfs*?|1|0.23|ENSG00000124635|chr6:27132410-27132440|TCGGACACGGCGTGCTTGGCCAACTCCCCAG/-|frameshift_variant;;ENSG00000277224|ENST00000356530|H2BC7;;ENSG00000274641|ENST00000616182|H2BC17;;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;;ENSG00000273802|ENST00000541790|H2BC8;;ENSG00000274290|ENST00000614097|H2BC6;;nc|ENSG00000203814|Q5QNW6-2|H2BC18;;ENSG00000203814|ENST00000369167|H2BC18;;ENSG00000233822|ENST00000612898|H2BC15;;ENSG00000146047|ENST00000274764|H2BC1;;HIST1H2BJ|p.P104T|1|0.48|ENSG00000124635|chr6:27132441-27132441|G/T|missense_variant;;ENSG00000276410|ENST00000615966|H2BC3;;ENSG00000124635|ENST00000339812|H2BC11;;ENSG00000234289|ENST00000599962|H2BC12L;;ENSG00000275713|ENST00000619466|H2BC9;;ENSG00000158373|ENST00000377777|H2BC5;;ENSG00000273703|ENST00000621112|H2BC14;;ENSG00000278588|ENST00000377733|H2BC10;;ENSG00000180596|ENST00000396984|H2BC4;;ENSG00000197903|ENST00000356950|H2BC12;;ENSG00000185130|ENST00000377401|H2BC13;;ENSG00000184678|ENST00000369155|H2BC21 3.1008463700612388 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19099 91.673 135.0 701590.0 25 0 118270.0 21423 LPGSPLIL 8 83 809.5134060345256 808.5061295679255 1 811.5200683474541 MULTI CID FTMS 0 0 0 19094 400082.53125 0.1470057590486574 -9 0.899810791015625 5 Unmodified _LPGSPLIL_ ENSG00000114982|ENST00000431828|KANSL3;ENST00000447759.5_3_2:97261350-97293793:-|nuORF;ENST00000487070.5_1_2:97267510-97285240:-|nuORF;ENST00000597150.5_1_2:97261350-97297069:-|nuORF;nc|ENSG00000114982|Q9P2N6-2|KANSL3;nc|ENSG00000114982|Q9P2N6-4|KANSL3;nc|ENSG00000114982|Q9P2N6-5|KANSL3;nc|ENSG00000114982|Q9P2N6-6|KANSL3;nc|ENSG00000114982|Q9P2N6-8|KANSL3;nc|ENSG00000114982|Q9P2N6|KANSL3 36.04419817259434 0.3004715606373109 3 [{I|L}P][SG]{I|L}V{I|L} 7 2 39.631 0.0 0.0 4.9017 0.0 0.0 0.0 126.06544732566978 126.06544732566978 24.760883653225303 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.8556270500406937 0.0 [{I|L}P][SG]{I|L}V{I|L} 4.9017 - 365 1 1.458 68767.3 1.0 13302 5795 19094 HBL1_DMSO_200M_050219_1,19099 HBL1_DMSO_200M_050219_1,19099,LPGSPLIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19100 91.674 75.0 913400.0 25 0 82739.0 + 18639 LAGLFIEEEL 10 108 567.3082365767435 1132.601920220287 2 567.3097411990166 MULTI CID FTMS 0 0 0 19094 369896.125 0.7713400081235007 1 -0.1088027954101562 6 Unmodified _LAGLFIEEEL_ REV__ENST00000394609.6_1_2:55199503-55199656:-|nuORF 19.256988751693697 0.5244284437930726 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}KKNE{I|L} 9 -1 + 47.435 0.0 0.0 4.1882 4.1882 75.819 0.0 0.0 0.0 7.212463990471711 16.478174818886373 7.212463990471711 3.645905653187434 0 1.089136830878453 0.721246399047171 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}KKNE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}KKDQ{I|L};[EP]Y{I|L}KKNE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}[K{I|L}]EE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}KKGGE{I|L};[EP]Y{I|L}KKDQ{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}KKD[AG]{I|L};[EP]Y{I|L}[K{I|L}]EE{I|L};[EP]Y{I|L}KKGGE{I|L};{[QN]|[E{I|L}]|[KN]}[YK]PKNE{I|L} 4.1882;3.8663;3.5514;3.5474;3.3752;3.2295;3.0533;2.9106;2.7384;2.7044 -;-;-;-;-;-;-;-;-;- 430 1 1.458 56898.7 1.0 13303 5795 19094 HBL1_DMSO_200M_050219_1,19100 HBL1_DMSO_200M_050219_1,19100,LAGLFIEEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19101 91.676 56.0 726630.0 25 0 60063.0 + 20482 LLLDVPTAAV 10 81 506.3079342698748 1010.6013156065496 2 506.3088867068291 MULTI CID FTMS 0 0 0 19094 361283.59375 0.030623318681844 -2 0.2000350952148437 7 Unmodified _LLLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 20.453626601364224 0.5043500229302764 3 {I|L}{I|L}DV{I|L}E 6 6 37.229 0.0 0.0 3.6838 0.0 0.0 0.0 325.1922939603183 325.1922939603183 12.374569229549545 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {I|L}{I|L}DV{I|L}E 3.6838 - 177 1 1.458 39053.9 1.0 13304 5795 19094 HBL1_DMSO_200M_050219_1,19101 HBL1_DMSO_200M_050219_1,19101,LLLDVPTAAV False True LLLDVPTAAV 91.675711 506.308886706829 115417248.0 19094.0 ENSG00000216490|ENST00000407280|IFI30 3.152057528495789 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19102 91.677 73.0 792760.0 25 0 121930.0 + + 43268 RAADVLVYL 9 73 510.2979978067708 1018.5814426803416 2 510.2982055544853 MULTI CID FTMS 0 0 0 19094 347298.3125 0.2355846770518093 -2 0.2000350952148437 8 Unmodified _WGGVLIVYI_ nc|ENSG00000227942|Q9BZ68|FRMD8P1;ENSG00000126391|ENST00000317568|FRMD8;nc|ENSG00000126391|Q9BZ67-3|FRMD8 20.871210003555333 0.2717241269066626 3 [YV][H{I|L}]{I|L}VY{I|L} 8 -1 + 49.614 0.0 0.0 4.8709 4.8709 88.062 0.0 0.0 0.0 7.186427890645248 33.16061246681059 7.186427890645248 49.61426266193144 0 0.5 1.6989700043360187 0.0 0.0 [YV][H{I|L}]{I|L}VY{I|L} 4.8709 - 108 1 1.458 49188.1 1.0 13305 5795 19094 HBL1_DMSO_200M_050219_1,19102 HBL1_DMSO_200M_050219_1,19102,WGGVLIVYI False False RAADVLVYL 91.6774 510.298205554485 28505542.0 19094.0 nc|ENSG00000227942|Q9BZ68|FRMD8P1;;ENSG00000126391|ENST00000317568|FRMD8;;nc|ENSG00000126391|Q9BZ67-3|FRMD8 5.232694307963054 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19103 91.68 103.0 392240.0 25 0 54753.0 22560 LPWRRNKFVLV 11 71 476.62409106967095 1426.850443809213 3 476.6239501833916 MULTI CID FTMS 0 0 0 19094 293321.25 0.3628240802552511 1 -0.1088027954101562 9 Unmodified _LPWRRNKFVLV_ ENSG00000183114|ENST00000332947|FAM43B 1.4551175022131473 0.8682825962816412 3 [{I|L}P]Q 3 9 13.512 0.0 0.0 0.94696 0.0 0.0 0.0 1085.6327978954037 1085.6327978954037 1.037494375383618 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [{I|L}P]Q 0.94696 - 33 1 1.458 39161.4 1.0 13306 5795 19094 HBL1_DMSO_200M_050219_1,19103 HBL1_DMSO_200M_050219_1,19103,LPWRRNKFVLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19104 91.681 82.0 507470.0 25 0 91747.0 + 3739 DAFTFRHFL 9 69 577.293256846978 1152.571960760756 2 577.2928344607353 MULTI CID FTMS 0 0 0 19094 271052.90625 0.4757425252192502 1 -0.1088027954101562 10 Unmodified _DAFTFRHFL_ ENSG00000167487|ENST00000300976|KLHL26 46.0223103267499 0.0490911897871712 3 DA{M(Oxidation (M))|F}T[R{M(Oxidation (M))|F}]H{M(Oxidation (M))|F}{I|L} 9 0 + 75.16 0.0 0.0 6.5211 6.5211 84.808 0.0 0.0 0.0 64.7814255367862 9.665762445130497 9.665762445130497 4.771212547196626 0 1.7302046884880935 1.5228787452803376 0.0 0.4247425010840047 + + DA{M(Oxidation (M))|F}T[R{M(Oxidation (M))|F}]H{M(Oxidation (M))|F}{I|L};DA{M(Oxidation (M))|F}{I|L}[YQ]H{M(Oxidation (M))|F}{I|L};W{M(Oxidation (M))|F}{I|L}[WP][YE]{I|L};D[YR][R{M(Oxidation (M))|F}]H{M(Oxidation (M))|F}{I|L} 6.5211;6.1071;2.2096;2.2047 +;-;-;- + 82 + 1 1.458 40233.8 1.0 13307 5795 19094 HBL1_DMSO_200M_050219_1,19104 HBL1_DMSO_200M_050219_1,19104,DAFTFRHFL True True DAFTFRHFL 91.681461 577.292834460735 13147412.5 19094.0 ENSG00000167487|ENST00000300976|KLHL26 7.1293625831604 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19105 91.683 76.0 606030.0 25 0 75986.0 + 9520 FLFEDFSKA 9 71 552.2742039487047 1102.5338549642092 2 552.2742187380791 MULTI CID FTMS 0 0 0 19094 268532.34375 0.5846491343853392 -1 0.119537353515625 11 Unmodified _FLFEDFSKA_ ENSG00000109084|ENST00000226230|TMEM97 24.99096001346401 0.2132109383330889 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}S[KA] 9 0 + 31.379 0.0 0.0 2.8461 2.8461 81.17 0.0 0.0 0.0 19.160546934575468 6.197114610913491 6.197114610913491 17.220165059861117 0 0.4247425010840047 0.0 0.0 0.2059771852360797 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}S[KA];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}ED[KT]{[CT]|[{M(Oxidation (M))|F}G]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}[KG]{[{M(Oxidation (M))|F}D]|MM}MV 2.8461;1.2842;0.046683 +;-;- + 67 + 1 1.458 44018.2 1.0 13308 5795 19094 HBL1_DMSO_200M_050219_1,19105 HBL1_DMSO_200M_050219_1,19105,FLFEDFSKA False True FLFEDFSKA 91.683228 552.274218738079 3667546.0 19094.0 ENSG00000109084|ENST00000226230|TMEM97 6.685062885284424 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19106 91.685 62.0 1138000.0 25 0 115260.0 + 34251 SLQEKLWAI 9 114 544.3100887897485 1086.605624646297 2 544.3109619021416 MULTI CID FTMS 0 0 0 19094 259082.8125 0.7534944770185843 1 -0.1088027954101562 12 Unmodified _SLQEKLWAI_ ENSG00000101417|ENST00000409299|PXMP4;ENST00000217398.3_1_20:32295514-32298573:-|nuORF 39.94969957227396 0.0757326808254658 3 {[TV]|[{I|L}S]}QE 4 5 37.312 0.0 0.0 3.4338 0.0 0.0 0.0 626.3677462213499 626.3677462213499 9.720580915876766 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.3054621874040891 0.5 + {[TV]|[{I|L}S]}QE 3.4338 + + 1048 + 1 1.458 57795.6 1.0 13309 5795 19094 HBL1_DMSO_200M_050219_1,19106 HBL1_DMSO_200M_050219_1,19106,SLQEKLWAI True True SLQEKLWAI 91.684757 544.310961902142 4168370.75 19094.0 ENST00000217398.3_1_20:32295514-32298573:-|nuORF;;ENSG00000101417|ENST00000409299|PXMP4 2.037514845530192 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19107 91.689 214.0 373570.0 25 0 65299.0 + 20550 LLLWLLAASV 10 88 549.8477718149214 1097.6809906966428 2 549.8484985232353 MULTI CID FTMS 0 0 0 19094 223922.625 0.6534044533118982 1 -0.1088027954101562 13 Unmodified _LLLWLLAASV_ REV__ENSG00000172156|ENST00000305869|CCL11 16.942295170755138 0.5632667538960775 3 G{I|L}{I|L}{I|L}W 5 -1 43.756 0.0 0.0 3.9862 0.0 0.0 497.2960325864384 0.0 497.2960325864384 0.0 25.127881306118454 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 G{I|L}{I|L}{I|L}W 3.9862 - 133 1 1.458 66972.6 1.0 13310 5795 19094 HBL1_DMSO_200M_050219_1,19107 HBL1_DMSO_200M_050219_1,19107,LLLWLLAASV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19108 91.691 99.0 528630.0 25 0 60361.0 + 33729 SLADLMPRV 9 94 501.2757849312601 0 501.2764160037041 PEAK CID FTMS 0 0 0 19094 133373.96875 0.3989878456406174 -1 0.119537353515625 14 Unmodified _SLADLMPRV_ ENSG00000039123|ENST00000230640|MTREX;ENST00000503165.5_1_5:54603841-54625205:+|nuORF;ENST00000504388.5_1_5:54603829-54620403:+|nuORF 22.736283301280096 0.1762661025464585 3 AD{I|L}YR 5 5 26.476 0.0 0.0 2.6461 0.0 0.0 200.1156120231984 179.08258997135002 379.1982019945484 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 AD{I|L}YR 2.6461 - 58 + 1 1.458 44381.7 1.0 13311 5795 19094 HBL1_DMSO_200M_050219_1,19108 HBL1_DMSO_200M_050219_1,19108,SLADLMPRV False True SLADLMPRV 91.690955 501.276416003704 5327730.5 19094.0 ENSG00000039123|ENST00000230640|MTREX;;ENST00000503165.5_1_5:54603841-54625205:+|nuORF;;ENST00000504388.5_1_5:54603829-54620403:+|nuORF 4.859103441238403 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19109 91.705 800.0 177370.0 25 0 9537.8 -1 0 139 753.8759296179318 3011.474612605327 4 754.1276122927666 MULTI CID FTMS 0 0 0 19094 126079.4296875 0.0634961769543415 -3 0.33050537109375 15 3 {NN|[MP]|[D{I|L}]|[EV]}GPGEGQ[C(Carbamidomethyl (C))R][NP]A{I|L}WVA{I|L}SA{I|L}SD{I|L}HA[HK] 28 -1 {NN|[MP]|[D{I|L}]|[EV]}GPGEGQ[C(Carbamidomethyl (C))R][NP]A{I|L}WV + + 64.11 21.667 1.2383 2.1289 2.1289 48.954 0.0 0.0 0.0 0.0 41.331682236865234 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}GPGEGQ[C(Carbamidomethyl (C))R][NP]A{I|L}WVA{I|L}SA{I|L}SD{I|L}HA[HK] 2.1289 - 7239 + 1 1.458 108648.5 0.8500000238418579 13312 5795 19094 HBL1_DMSO_200M_050219_1,19109 HBL1_DMSO_200M_050219_1,19109, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19110 91.719 800.0 118960.0 25 0 5401.4 -1 0 132 919.9372074737536 1837.8598620143075 2 920.4382202029228 MULTI CID FTMS 0 0 0 19094 106257.1328125 0.4493029070853748 3 -0.3433761596679687 16 3 {I|L}{I|L}{I|L}A{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{I|L} 8 -1 38.215 0.0 0.0 2.0793 0.0 0.0 936.3386960980948 0.0 936.3386960980948 0.0 5.731979151482264 0.0 0.0 0 0.0 0.0 1.4225924581435252 0.0 {I|L}{I|L}{I|L}A{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{I|L} 2.0793 - 3884 + 1 1.458 66807.4 0.8999999761581421 13313 5795 19094 HBL1_DMSO_200M_050219_1,19110 HBL1_DMSO_200M_050219_1,19110, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19111 91.732 800.0 173760.0 25 0 20046.0 -1 0 138 657.0253841958055 1968.0543231876163 3 657.0276977419853 MULTI CID FTMS 0 0 0 19094 98976.9765625 1.0 0 0.0 17 3 {[VA]|[{I|L}G]}GKG{I|L}M[WP]G{I|L}{I|L} 12 -1 55.324 0.0 0.0 2.8111 0.0 0.0 0.0 742.3317639437288 742.3317639437288 28.68088537734945 0.0 0.0 0.0 0 0.5 2.0 0.0 0.9456290139465237 {[VA]|[{I|L}G]}GKG{I|L}M[WP]G{I|L}{I|L} 2.8111 - 2734 1 1.458 110354.8 0.7400000095367432 13314 5795 19094 HBL1_DMSO_200M_050219_1,19111 HBL1_DMSO_200M_050219_1,19111, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19112 91.738 191.0 1174400.0 25 0 223410.0 19618 LGDLDAMIFN 10 164 554.7724282605986 1107.5303035879972 2 554.7719604372978 MULTI CID FTMS 0 0 0 19094 84389.1484375 0.6803678384079844 1 -0.1088027954101562 18 Unmodified _LGDLDAMIFN_ ENSG00000081913|ENST00000262719|PHLPP1;nc|ENSG00000081913|O60346-2|PHLPP1 25.399314129420983 0.3980215340001851 3 {[DA]|[EG]}{I|L}DVA{I|L}KNG 10 6 80.033 0.0 0.0 7.2262 0.0 0.0 0.0 107.9830373128597 107.9830373128597 18.585919301523475 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.7432645930102426 0.3494850021680094 {[DA]|[EG]}{I|L}DVA{I|L}KNG 7.2262 - 166262 1 1.458 171221.0 1.0 13315 5795 19094 HBL1_DMSO_200M_050219_1,19112 HBL1_DMSO_200M_050219_1,19112,LGDLDAMIFN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19113 91.751 800.0 192300.0 25 0 7120.6 -1 0 138 943.9720991859338 1885.929645438668 2 944.475146472454 MULTI CID FTMS 0 0 0 19094 92286.1640625 0.2735872099185044 7 -0.754638671875 19 3 [NP]D{I|L}{I|L}TR 7 -1 40.452 0.0 0.0 2.1449 0.0 0.0 0.0 1073.4806457650925 1073.4806457650925 3.694444260648801 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.9896518287104438 0.2887254899964357 [NP]D{I|L}{I|L}TR 2.1449 - 7112 1 1.458 103305.4 0.6600000262260437 13316 5795 19094 HBL1_DMSO_200M_050219_1,19113 HBL1_DMSO_200M_050219_1,19113, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19114 91.765 800.0 173750.0 25 0 23761.0 + 44403 YLYDRLLRI 9 107 408.9081671885063 1223.702672165719 3 408.9080993533134 MULTI CID FTMS 0 0 0 19094 82954.8125 0.145610150343193 2 -0.239349365234375 20 Unmodified _YLYDRLLRI_ ENSG00000101003|ENST00000262460|GINS1 43.9818466556824 0.0535980856389242 3 Y{I|L}YDR{I|L}{I|L}R{I|L} 9 0 + 71.6 0.0 0.0 5.8511 5.8511 77.1 0.0 0.0 0.0 36.478174818886366 1.0914446942506686 1.0914446942506686 1.0914446942506686 0 0.3494850021680094 2.0 0.0 1.1307196863200843 + + Y{I|L}YDR{I|L}{I|L}R{I|L};Y{I|L}YDR{I|L}{I|L}{I|L}R 5.8511;5.7619 +;- + 69 + 1 1.458 111683.2 0.4199999868869781 13317 5795 19094 HBL1_DMSO_200M_050219_1,19114 HBL1_DMSO_200M_050219_1,19114,YLYDRLLRI True True YLYDRLLRI 91.765273 408.908099353313 10803768.0 19094.0 ENSG00000101003|ENST00000262460|GINS1 3.819980223973592 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19116 91.77 53.0 1715800.0 25 0 218710.0 + 21927 LPPIKVLVV 9 94 489.3417899938436 976.6690270544872 2 489.3416931033134 MULTI CID FTMS 0 0 0 19115 2081448.625 0.7682574768771953 2 -0.2345733642578125 1 Unmodified _LPPIKVLVV_ ENSG00000056736|ENST00000288167|IL17RB;ENST00000475124.1_1_3:53892553-53899332:+|nuORF 36.04419817259434 0.0971720506436186 3 [{I|L}P]KV{I|L}VP 7 3 53.588 0.0 0.0 5.4868 0.0 0.0 0.0 227.1396166841578 227.1396166841578 39.6087259199831 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}P]KV{I|L}VP 5.4868 - 357 1 1.479 72691.5 1.0 13318 5796 19115 HBL1_DMSO_200M_050219_1,19116 HBL1_DMSO_200M_050219_1,19116,LPPIKVLVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19117 91.772 100.0 894050.0 25 0 77756.0 + 3119 AVPEVAVYL 9 101 480.7738979325904 0 480.7736694216728 PEAK CID FTMS 0 0 0 19115 482416.90625 0.6535641043444097 2 -0.2345733642578125 2 Unmodified _AVPEVAVYL_ ENSG00000119383|ENST00000393370|PTPA;nc|ENSG00000119383|Q15257-3|PTPA;nc|ENSG00000119383|Q15257-4|PTPA;nc|ENSG00000119383|Q15257|PTPA 23.1484247019978 0.1725298825155634 3 AVAV 4 5 21.938 0.0 0.0 2.2863 0.0 0.0 393.226127308737 223.07283960513908 616.2989669138761 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AVAV 2.2863 - 229 + 1 1.479 70232.5 1.0 13319 5796 19115 HBL1_DMSO_200M_050219_1,19117 HBL1_DMSO_200M_050219_1,19117,AVPEVAVYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19118 91.774 47.0 1286400.0 25 0 174910.0 + 41570 VPPENIIYI 9 72 529.3002944283521 1056.586035923504 2 529.3004638552666 MULTI CID FTMS 0 0 0 19115 1220103.125 0.5380700331568656 -3 0.308837890625 3 Unmodified _VPPENIIYI_ ENSG00000155096|ENST00000337198|AZIN1;ENST00000522311.1_1_8:103848756-103855898:-|nuORF 25.399314129420983 0.2080152500878129 3 N{I|L}V{I|L}Y{I|L} 6 5 44.13 0.0 0.0 4.1766 0.0 0.0 323.14851576972814 0.0 323.14851576972814 0.0 29.52561882712928 0.0 0.0 0 0.7742275032520141 0.0 0.0 1.0356668758921828 N{I|L}V{I|L}Y{I|L} 4.1766 - 131 1 1.479 53133.6 1.0 13320 5796 19115 HBL1_DMSO_200M_050219_1,19118 HBL1_DMSO_200M_050219_1,19118,VPPENIIYI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19119 91.777 195.0 447840.0 25 0 59309.0 + 25789 NKIGLWVNLRK 11 116 670.910313018705 1339.80607310421 2 670.9109985232353 MULTI CID FTMS 0 0 0 19115 518690.9375 0.5559163469002192 -2 0.2283401489257812 4 Unmodified _NKIGLWVNLRK_ REV__ENSG00000117461|ENST00000262741|PIK3R3;REV__nc|ENSG00000117461|Q92569-2|PIK3R3;REV__nc|ENSG00000117461|Q92569-3|PIK3R3 8.155526934196011 0.8366696279279818 3 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}N 12 -1 80.5 0.0 0.0 6.0083 0.0 0.0 0.0 113.11159003219736 113.11159003219736 46.00350135195386 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.6505149978319906 0.9916440611282626 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}N 6.0083 - 15847 1 1.479 73352.4 1.0 13321 5796 19115 HBL1_DMSO_200M_050219_1,19119 HBL1_DMSO_200M_050219_1,19119,NKIGLWVNLRK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19120 91.783 289.0 660180.0 25 0 141520.0 -1 0 104 357.7418858691498 713.4692188050997 2 357.7415954470634 MULTI CID FTMS 0 0 0 19115 494508.34375 0.5830890448614302 -1 0.1088027954101562 5 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}{I|L}K 6 -1 + 55.666 0.0 0.0 7.8021 7.8021 81.45 0.0 0.0 0.0 22.47933455448525 0.4575749056067479 0.4575749056067479 0.4575749056067479 0 0.7059771852360797 2.0 0.0 0.2742275032520141 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}{I|L}K;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}K{I|L};{I|L}{I|L}K{I|L}D{I|L};[K{I|L}]{I|L}{I|L}D{I|L} 7.8021;7.738;2.5356;1.2698 -;-;-;- 56 + 1 1.479 153830.5 1.0 13322 5796 19115 HBL1_DMSO_200M_050219_1,19120 HBL1_DMSO_200M_050219_1,19120, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19121 91.793 611.0 209200.0 25 0 46186.0 + 27640 PLGSPLLL 8 158 405.2603300278034 808.5061071224068 2 405.2599365115166 MULTI CID FTMS 0 0 0 19115 469299.46875 1.0 0 0.0 6 Unmodified _PLGSPLLL_ ENST00000537708.1_1_12:6669555-6669804:-|nuORF 59.79521254764295 0.1151759508933577 3 [{I|L}P][SG]P{I|L}{I|L}{I|L} 8 0 + 60.6 0.0 0.0 7.4954 7.4954 89.604 0.0 0.0 0.0 15.805592334254811 36.66992713939967 15.805592334254811 6.817496819840656 0 0.8494850021680094 2.0 1.0501648626366045 0.0 + + [{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L};[VS][PA]P{I|L}{I|L}{I|L};[VS][PA]{I|L}P{I|L}{I|L} 7.4954;6.6521;3.8414;2.9982 +;-;-;- + 137 1 1.479 102049.5 1.0 13323 5796 19115 HBL1_DMSO_200M_050219_1,19121 HBL1_DMSO_200M_050219_1,19121,PLGSPLLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19122 91.798 274.0 351450.0 25 0 44827.0 + 22613 LPYKIAYYI 9 149 572.325750660838 1142.636948388476 2 572.8275634646416 MULTI CID FTMS 0 0 0 19115 466216.25 0.8551435564395481 4 -0.4491653442382812 7 Unmodified _LPYKIAYYI_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 29.84058131909904 0.1515068451768857 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}AY{I|L}Y{I|L} 9 2 + 52.295 0.0 0.0 4.5767 4.5767 75.923 0.0 0.0 0.0 4.27948461635836 14.973024840566469 4.27948461635836 3.0102999566398125 0 0.8807196863200843 1.0457574905606752 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}AY{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}A{I|L}YY{I|L};[{I|L}P]YKAY{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KY{I|L}A{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}AYY{I|L}{I|L};[{I|L}P]YKA{I|L}YY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}YA{I|L}Y{I|L};[{I|L}P]YKAYY{I|L}{I|L};[{I|L}P]YKYA{I|L}Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}KPY{I|L}Y{I|L} 4.5767;4.3133;4.2022;4.0498;3.945;3.9388;3.8957;3.5705;3.5212;3.4847 -;-;-;-;-;-;-;-;-;- 4077 1 1.479 78151.0 1.0 13324 5796 19115 HBL1_DMSO_200M_050219_1,19122 HBL1_DMSO_200M_050219_1,19122,LPYKIAYYI False True LPYKIAYYI 91.798358 572.827563464642 3632583.25 19115.0 ENSG00000197969|ENST00000360280|VPS13A;;nc|ENSG00000197969|Q96RL7-2|VPS13A;;nc|ENSG00000197969|Q96RL7-4|VPS13A;;nc|ENSG00000197969|Q96RL7-3|VPS13A 4.226225694020589 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19123 91.8 94.0 934540.0 25 0 69722.0 + 26295 NQVPKLLYL 9 131 544.3292460890909 1086.6439392449818 2 544.3297607302666 MULTI CID FTMS 0 0 0 19115 400723.03125 0.439417715893901 -2 0.2283401489257812 8 Unmodified _NQVPKLLYL_ ENSG00000147231|ENST00000372548|RADX;nc|ENSG00000147231|Q6NSI4-2|RADX;nc|ENSG00000147231|Q6NSI4-3|RADX;nc|ENSG00000147231|Q6NSI4-4|RADX 34.10243960390752 0.1078313939113124 3 GGQV 4 8 28.773 0.0 0.0 2.6478 0.0 0.0 0.0 742.4510125694536 742.4510125694536 0.3130506012684293 0.0 0.0 0.0 0 1.0 1.0 0.0 0.7302046884880937 GGQV 2.6478 - 499 1 1.479 71843.8 1.0 13325 5796 19115 HBL1_DMSO_200M_050219_1,19123 HBL1_DMSO_200M_050219_1,19123,NQVPKLLYL True True NQVPKLLYL 91.800421 544.329760730267 10185475.0 19115.0 nc|ENSG00000147231|Q6NSI4-4|RADX;;ENSG00000147231|ENST00000372548|RADX;;nc|ENSG00000147231|Q6NSI4-3|RADX;;nc|ENSG00000147231|Q6NSI4-2|RADX 2.741570154825846 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19124 91.803 112.0 1108300.0 25 0 158970.0 14906 ILLHFLFM 8 134 517.2989911011326 1032.5834292690652 2 517.2991821169853 MULTI CID FTMS 0 0 0 19115 388310.75 0.5500439559077537 -4 0.4393081665039062 9 Unmodified _ILLHFLFM_ ENST00000316423.10_1_4:39515794-39523020:-|nuORF 24.20995872069341 0.5349487244130675 3 {I|L}{I|L}{I|L}DV[YQ]AV 9 6 + 63.38 0.0 0.0 6.138 6.138 77.508 0.0 0.0 0.0 34.97302484056647 0.796896906561031 0.796896906561031 0.796896906561031 0 1.1861818737241734 2.0 0.0 0.0 {I|L}{I|L}{I|L}DV[YQ]AV;{I|L}{I|L}{I|L}DV[YQ]G{I|L};{I|L}{I|L}{I|L}DV[YN]A{I|L};{I|L}{I|L}{I|L}DVG[YQ]{I|L};{I|L}{I|L}{I|L}DVG[YG]A{I|L};{I|L}{I|L}VEV[YQ]AV;{I|L}{I|L}VEV[YQ]G{I|L};{I|L}{I|L}VEV[YN]A{I|L};{I|L}{I|L}VEVG[YQ]{I|L};{I|L}{I|L}VEVG[YG]A{I|L} 6.138;6.0608;6.0393;6.0091;5.7973;5.5549;5.4777;5.4563;5.4261;5.2143 -;-;-;-;-;-;-;-;-;- 546 + 1 1.479 103200.1 1.0 13326 5796 19115 HBL1_DMSO_200M_050219_1,19124 HBL1_DMSO_200M_050219_1,19124,ILLHFLFM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19125 91.815 673.0 350620.0 25 0 13681.0 + 11162 GELDVYKVETI 11 195 633.3363556672576 0 633.3361694216728 PEAK CID FTMS 0 0 0 19115 355044.03125 1.0 0 0.0 10 Unmodified _GELDVYKVETI_ ENSG00000164116|ENST00000506455|GUCY1A1;nc|ENSG00000164116|Q02108-2|GUCY1A1 51.41523569358685 0.0428670251994379 3 {I|L}G{I|L}KD 5 9 33.763 0.0 0.0 2.6697 0.0 0.0 131.08993926159798 604.228920747572 735.3188600091701 0.0 0.0 0.0 0.0 0 0.9291746928241128 0.0 1.2521934810768762 0.2396518287104437 {I|L}G{I|L}KD 2.6697 - 3387 + 1 1.479 182581.5 1.0 13327 5796 19115 HBL1_DMSO_200M_050219_1,19125 HBL1_DMSO_200M_050219_1,19125,GELDVYKVETI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19126 91.818 189.0 827340.0 25 0 120480.0 37322 TIVAVTKVI 9 133 472.3129352207808 942.6113175083616 2 472.3120605349541 MULTI CID FTMS 0 0 0 19115 350260.03125 0.4088409617730058 -1 0.1088027954101562 11 Unmodified _TIVAVTKVI_ ENST00000563894.1_1_15:75090907-75091078:+|nuORF 34.40172386719151 0.1061884637610825 3 {I|L}T{I|L}G{I|L}S{I|L}KV 9 6 + 78.013 0.0 0.0 8.2762 8.2762 87.971 0.0 0.0 0.0 36.47817481888637 7.028116697275095 7.028116697275095 3.974315640635595 0 0.4247425010840047 2.0 0.0 0.1861818737241735 {I|L}T{I|L}G{I|L}S{I|L}KV;{I|L}TVA{I|L}S{I|L}KV;{I|L}T{I|L}VAS{I|L}KV;{I|L}T{I|L}G{I|L}SKV{I|L};{I|L}TV{I|L}AS{I|L}KV;{I|L}TVA{I|L}SKV{I|L};{I|L}T{I|L}G{I|L}SK{I|L}V;{I|L}T{I|L}VASKV{I|L};{I|L}TVA{I|L}SK{I|L}V;{I|L}TV{I|L}ASKV{I|L} 8.2762;7.8546;7.6375;7.5306;7.2159;7.109;6.9535;6.8919;6.5318;6.4703 -;-;-;-;-;-;-;-;-;- 2312 + 1 1.479 125882.3 1.0 13328 5796 19115 HBL1_DMSO_200M_050219_1,19126 HBL1_DMSO_200M_050219_1,19126,TIVAVTKVI True True TLIGLSIKV 91.818141 472.312060534954 6205368.0 19115.0 ENSG00000166595|ENST00000422424|CIAO2B;;ENST00000569299.1_1_16:66967504-66968009:-|nuORF;;ENST00000562362.5_1_16:66966108-66968009:-|nuORF 4.138053735097249 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19127 91.823 291.0 408090.0 25 0 60644.0 + 39 GLVGALMHV 9 130 448.2842274182863 894.5539019033725 2 448.2840453982353 MULTI CID FTMS 0 0 0 19115 335917.84375 0.0877717548042456 4 -0.4491653442382812 12 Unmodified _AAAPQLLIV_ ENSG00000015285|ENST00000376701|WAS;ENST00000470107.1_1_X:48547419-48547927:+|nuORF 38.15118350030904 0.0856056900103839 3 {[VA]|[{I|L}G]}AP{I|L}AAA{I|L}V 10 5 + 47.362 0.0 0.0 5.2944 5.2944 83.62 0.0 0.0 0.0 9.030899869919438 8.507112333562858 8.507112333562858 7.7815125038364386 0 0.6549471895720985 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}AP{I|L}AAA{I|L}V;{[VA]|[{I|L}G]}APA{I|L}AA{I|L}V;AAVP{I|L}AAA{I|L}V;{[VA]|[{I|L}G]}AP{[NV]|[RG]}{I|L}{I|L}V;[QP]{I|L}{I|L}AAA{I|L}V;{[VA]|[{I|L}G]}AP{I|L}{[NV]|[RG]}{I|L}V;{[VA]|[{I|L}G]}APAAA{I|L}{I|L}V;AAVPA{I|L}AA{I|L}V;{I|L}{I|L}[QP]AAA{I|L}V;[PA]G{I|L}{I|L}AAA{I|L}V 5.2944;4.4246;4.2849;3.9973;3.8714;3.6745;3.5349;3.415;3.2297;3.2261 -;-;-;-;-;-;-;-;-;- 803 1 1.479 96131.2 1.0 13329 5796 19115 HBL1_DMSO_200M_050219_1,19127 HBL1_DMSO_200M_050219_1,19127,AAAPQLLIV True True GLVGALMHV 91.823473 448.284045398235 3051549.5 19115.0 ENSG00000015285|ENST00000376701|WAS;;ENST00000470107.1_1_X:48547419-48547927:+|nuORF 5.377640247344971 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19128 91.837 800.0 163290.0 25 0 10846.0 + 11161 GELDVYKVETI 11 164 422.5607294394596 1264.6603589185788 3 422.5607787966728 MULTI CID FTMS 0 0 0 19115 312655.34375 1.0 0 0.0 13 Unmodified _GELDVYKVETI_ ENSG00000164116|ENST00000506455|GUCY1A1;nc|ENSG00000164116|Q02108-2|GUCY1A1 29.84058131909904 0.3915366693542702 3 {[DA]|[EG]}{I|L}[HV]K[NG]{I|L} 9 5 32.743 0.0 0.0 2.5891 0.0 0.0 0.0 314.1346380535976 314.1346380535976 16.03122110131274 0.0 0.0 0.0 0 0.5 2.0 0.0 1.2302046884880935 {[DA]|[EG]}{I|L}[HV]K[NG]{I|L} 2.5891 - 1353 1 1.479 116233.8 0.949999988079071 13330 5796 19115 HBL1_DMSO_200M_050219_1,19128 HBL1_DMSO_200M_050219_1,19128,GELDVYKVETI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19129 91.852 784.0 130450.0 25 0 4150.5 + 16325 IYHHQFYSSI 10 170 647.8154144746903 1293.6162760161806 2 648.3178588747978 MULTI CID FTMS 0 0 0 19115 260215.40625 1.0 0 0.0 14 Unmodified _IYHHQFYSSI_ REV__ENST00000527597.1_1_11:9492659-9494227:+|nuORF 16.942295170755138 0.5632667538960775 3 [Y{I|L}]EP[KS]YD 8 -1 14.393 0.0 0.0 1.1126 0.0 0.0 0.0 295.11802097151184 295.11802097151184 -0.1762948830371709 0.0 -0.1762948830371709 0.0 0 0.0 1.5228787452803376 0.0 0.0 [Y{I|L}]EP[KS]YD 1.1126 - 932 1 1.479 83958.7 1.0 13331 5796 19115 HBL1_DMSO_200M_050219_1,19129 HBL1_DMSO_200M_050219_1,19129,IYHHQFYSSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19130 91.855 169.0 348570.0 25 0 14859.0 -1 0 92 603.302730036118 3011.4772678475897 5 603.5049316287041 MULTI CID FTMS 0 0 0 19115 262847.75 0.1562577537852219 -2 0.2283401489257812 15 3 {I|L}SA{I|L}SD[H{I|L}]A[HK] 11 -1 38.677 0.0 0.0 1.2843 0.0 0.0 1820.8385055363328 0.0 1820.8385055363328 0.0 21.99411062606839 0.0 0.0 0 0.0 0.0 0.6237125054200234 0.0 {I|L}SA{I|L}SD[H{I|L}]A[HK] 1.2843 - 1971 + 1 1.479 54171.3 1.0 13332 5796 19115 HBL1_DMSO_200M_050219_1,19130 HBL1_DMSO_200M_050219_1,19130, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19131 91.857 85.0 953880.0 25 0 257540.0 + 20019 LIMQRTLL 8 85 494.3029717715175 986.591390609835 2 494.3008300662041 MULTI CID FTMS 0 0 0 19115 254590.703125 0.0471415115655534 -3 0.308837890625 16 Unmodified _LIMQRTLL_ REV__ENST00000380752.9_1_13:30084114-30084255:-|nuORF 24.67388899826682 0.525179942228231 3 {I|L}{I|L}MA[NS]{I|L}{I|L} 8 -1 40.851 0.0 0.0 4.1407 0.0 0.0 0.0 128.07205242370097 128.07205242370097 25.366837651091387 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {I|L}{I|L}MA[NS]{I|L}{I|L} 4.1407 - 228 1 1.479 65965.4 1.0 13333 5796 19115 HBL1_DMSO_200M_050219_1,19131 HBL1_DMSO_200M_050219_1,19131,LIMQRTLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19132 91.871 800.0 182080.0 25 0 27020.0 18701 LAIWEASL 8 158 451.75254133747273 901.4905297417456 2 451.7532836794853 MULTI CID FTMS 0 0 0 19115 216817.125 0.0092927978618652 65 -7.267250061035156 17 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 42.96799951952854 0.1846367511955703 3 [{I|L}A]{M(Oxidation (M))|F}APS{I|L} 7 4 50.679 0.0 0.0 5.6217 0.0 0.0 0.0 199.10823318454013 199.10823318454013 31.22826962470469 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}APS{I|L} 5.6217 - 761 1 1.479 115934.2 0.7799999713897705 13334 5796 19115 HBL1_DMSO_200M_050219_1,19132 HBL1_DMSO_200M_050219_1,19132,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19133 91.879 362.0 197570.0 25 0 8425.6 + 34375 SLTLCLHYLLL 11 130 644.8718620070698 1287.7291710809395 2 645.3735839724541 MULTI CID FTMS 0 0 0 19115 214043.015625 0.1052967470950825 4 -0.4491653442382812 18 Unmodified _SLTLCLHYLLL_ REV__ENST00000360105.8_1_19:13209449-13209578:+|nuORF 36.12702656103203 0.2720571796884491 3 [PS]V{I|L}V{M(Oxidation (M))|F}TR[SG]{I|L}{I|L} 12 -1 + 36.92 0.0 0.0 2.8671 2.8671 69.828 0.0 0.0 0.0 1.858473866774105 2.548181095651856 1.858473866774105 1.858473866774105 0 0.961758134947864 0.6989700043360187 0.5752574989159953 0.0 [PS]V{I|L}V{M(Oxidation (M))|F}TR[SG]{I|L}{I|L};[{I|L}T]S{I|L}[KC]PV{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[TV]|[{I|L}S]}T{I|L}[KC]PV{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[{I|L}T]VKGQ{[QS]|[NT]}{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[{I|L}T]S{I|L}[KC]P{I|L}{[MG]|[TS]}{I|L}{I|L};{[DS]|[MA]|[CV]|TT}V{I|L}[KC]PV{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}KGQ{[QS]|[NT]}{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[{I|L}T]VKG{M(Oxidation (M))|F}PV{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[{I|L}T]VKGQ{[WS]|[C(Carbamidomethyl (C)){I|L}]}[SG]{I|L}{I|L};{[TV]|[{I|L}S]}T{I|L}[KC]P{I|L}{[MG]|[TS]}{I|L}{I|L} 2.8671;2.7228;2.502;2.3469;2.18;2.14;2.1261;2.0404;1.9764;1.9592 -;-;-;-;-;-;-;-;-;- 2258 1 1.479 60818.6 1.0 13335 5796 19115 HBL1_DMSO_200M_050219_1,19133 HBL1_DMSO_200M_050219_1,19133,SLTLCLHYLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19134 91.882 181.0 539530.0 25 0 29279.0 + 35433 STLHLVLRL 9 129 351.2258024463099 1050.6555779391297 3 351.2269470095634 MULTI CID FTMS 0 0 0 19115 205924.828125 0.0051144695393439 16 -1.7462081909179688 19 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 24.020572477871973 0.2255576514309169 3 {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}] 9 0 + 41.488 0.0 0.0 3.9488 3.9488 73.724 0.0 0.0 0.0 18.55651869704872 5.642492736872597 5.642492736872597 3.010299956639805 0 0.2614393726401688 0.0 0.0 0.0 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}];{[MG]|[TS]}{I|L}{I|L}HV{I|L}[R{I|L}];{[MG]|[TS]}{I|L}H{I|L}{I|L}V[R{I|L}];{[MG]|[TS]}{I|L}{I|L}H{I|L}V[R{I|L}] 3.9488;3.6623;2.997;2.7105 +;-;-;- + 130 + 1 1.479 84115.2 1.0 13336 5796 19115 HBL1_DMSO_200M_050219_1,19134 HBL1_DMSO_200M_050219_1,19134,STLHLVLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19135 91.896 800.0 365610.0 25 0 47751.0 33760 SLAQYLINA 9 226 496.77459064344686 0 496.7748596072197 PEAK CID FTMS 0 0 0 19115 192896.421875 0.3708795899964478 2 -0.2345733642578125 20 Unmodified _SLAQYLINA_ ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3 34.40172386719151 0.0892392376003579 3 {I|L}G{I|L}D{I|L} 5 7 16.154 0.0 0.0 1.6292 0.0 0.0 187.0574077499812 290.1537277430569 477.2111354930381 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 {I|L}G{I|L}D{I|L} 1.6292 - 1042 + 1 1.479 219988.2 0.959999978542328 13337 5796 19115 HBL1_DMSO_200M_050219_1,19135 HBL1_DMSO_200M_050219_1,19135,SLAQYLINA True True KVPPVLQVL 91.896062 496.77485960722 1634988.125 19115.0 ENST00000507900.5_1_5:176938794-176942272:-|nuORF;;ENSG00000183258|ENST00000330503|DDX41;;ENST00000503078.5_1_5:176938794-176943460:-|nuORF;;ENST00000505081.5_1_5:176938794-176940626:-|nuORF 3.0035775899887085 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19137 91.9 0.51 85004000.0 25 0 12188000.0 + 858 AEVDVNQKLLL 11 71 621.3578322744459 1240.7011116156916 2 621.3608886599541 MULTI CID FTMS 0 0 0 19136 111951392.0 0.986957407626696 -1 0.1305465698242187 1 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 28.49450938151212 0.4231428536161201 3 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L} 12 -1 + 85.606 0.0 0.0 6.8998 6.8998 88.529 0.0 0.0 0.0 12.71066772286538 7.447274948966935 7.447274948966935 7.408711341027228 0 2.274227503252014 1.5228787452803376 0.7614393726401688 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{[VA]|[{I|L}G]}EDVA{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}G{I|L}EG{I|L}{I|L};{[VA]|[{I|L}G]}EDVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}AVDEG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}G{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}DG{I|L}EG{I|L}{I|L} 6.8998;6.3027;5.8753;5.4297;5.4123;5.2782;5.0457;4.8326;4.8151;4.7024 -;-;-;-;-;-;-;-;-;- 977 1 1.459 38321.6 1.0 13338 5797 19136 HBL1_DMSO_200M_050219_1,19137 HBL1_DMSO_200M_050219_1,19137,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19138 91.901 25.0 1521900.0 25 0 158910.0 + 1370 ALADDDFLTV 10 78 540.2665068960231 1078.518460858846 2 540.2667724490166 MULTI CID FTMS 0 0 0 19136 1672989.125 0.7111305944780116 1 -0.1040267944335937 2 Unmodified _ALADDDFLTV_ ENSG00000104738|ENST00000649973|MCM4 22.65808497894818 0.4596126414678359 3 [{I|L}A]A 3 7 21.796 0.0 0.0 2.0209 0.0 0.0 0.0 820.3364899938648 820.3364899938648 1.7731749024395782 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [{I|L}A]A 2.0209 + + 164 1 1.459 35021.8 1.0 13339 5797 19136 HBL1_DMSO_200M_050219_1,19138 HBL1_DMSO_200M_050219_1,19138,ALADDDFLTV False True ALADDDFLTV 91.901447 540.266772449017 14604263.0 19136.0 ENSG00000104738|ENST00000649973|MCM4 5.572725931803386 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19139 91.903 18.0 3600000.0 25 0 625690.0 + 3914 DALGKLISI 9 72 465.2871294596233 928.5597059860468 2 465.2870971560478 MULTI CID FTMS 0 0 0 19136 3691939.25 0.113574570161476 -2 0.239349365234375 3 Unmodified _DALGKLISI_ ENSG00000089154|ENST00000300648|GCN1 55.50274090549119 0.0285720310785888 3 {[DA]|[EG]}{I|L}GK{I|L}{I|L}S{I|L} 9 0 + 61.098 0.0 0.0 6.5798 6.5798 93.317 0.0 0.0 0.0 22.58532514725495 32.452359395051715 22.58532514725495 35.21652514092061 0 1.6989700043360187 2.0 0.3807196863200844 0.0 + + {[DA]|[EG]}{I|L}GK{I|L}{I|L}S{I|L};{[SA]|[TG]}[TP]K{I|L}{I|L}S{I|L};[KG]{I|L}{I|L}{[DA]|[EG]}{I|L}S{I|L};[KG]{I|L}{I|L}{I|L}{[DA]|[EG]}S{I|L};[KG]{I|L}{[DA]|[EG]}{I|L}{I|L}S{I|L};{I|L}{I|L}KG{[DA]|[EG]}{I|L}S{I|L};{I|L}{I|L}KG{I|L}{[DA]|[EG]}S{I|L} 6.5798;2.7872;2.6815;2.5957;2.1677;1.4557;1.3698 +;-;-;-;-;-;- + 196 1 1.459 56941.8 1.0 13340 5797 19136 HBL1_DMSO_200M_050219_1,19139 HBL1_DMSO_200M_050219_1,19139,DALGKLISI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19140 91.904 26.0 2415500.0 25 0 251350.0 + 10156 FPYAFKEVI 9 93 557.3024624752268 1112.5903720172537 2 557.3027831912041 MULTI CID FTMS 0 0 0 19136 2184585.5 1.0 0 0.0 4 Unmodified _FPYAFKEVI_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 63.960520009940105 0.0238892913700936 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F}KE{M(Oxidation (M))|F}V{I|L} 9 3 + 65.038 0.0 0.0 5.8456 5.8456 77.701 0.0 0.0 0.0 2.809896305852746 2.809896305852746 2.809896305852746 1.4659125070036083 0 1.1237125054200234 2.0 0.7302046884880937 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F}KE{M(Oxidation (M))|F}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F}KEV{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}PYA{M(Oxidation (M))|F}EKV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YAKE{M(Oxidation (M))|F}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YAKEV{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{M(Oxidation (M))|F}KE{M(Oxidation (M))|F}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{M(Oxidation (M))|F}KEV{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}AKE{M(Oxidation (M))|F}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}AKEV{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}EQV{I|L} 5.8456;5.7139;5.5931;5.528;5.3962;5.081;4.9492;4.7633;4.6316;4.5365 -;-;-;-;-;-;-;-;-;- 1461 1 1.459 54983.2 1.0 13341 5797 19136 HBL1_DMSO_200M_050219_1,19140 HBL1_DMSO_200M_050219_1,19140,FPYAFKEVI True True FPYAFKEVI 91.903805 557.302783191204 89158476.0 19136.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1;;ENST00000493342.1_1_X:24745055-24752029:+|nuORF 6.040903568267822 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19141 91.905 41.0 2109100.0 25 0 368170.0 + + 20064 IITDLLRSV 9 104 515.3191487292233 1028.6237445252466 2 515.3199951052666 MULTI CID FTMS 0 0 0 19136 1397926.125 0.8575342822889186 -1 0.1305465698242187 5 Unmodified _LITDLLVRS_ ENSG00000162613|ENST00000370768|FUBP1;nc|ENSG00000162613|Q96AE4-2|FUBP1 18.373094154950223 0.3393451798331396 3 {I|L}{I|L}TD{I|L}{I|L} 6 -1 63.889 0.0 0.0 6.2111 0.0 0.0 0.0 357.1901033990844 357.1901033990844 52.62960296723602 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}TD{I|L}{I|L} 6.2111 + + 283 + 1 1.459 70699.3 1.0 13342 5797 19136 HBL1_DMSO_200M_050219_1,19141 HBL1_DMSO_200M_050219_1,19141,LITDLLVRS False False IITDLLRSV 91.904991 515.319995105267 11985658.0 19136.0 ENSG00000162613|ENST00000370768|FUBP1;;nc|ENSG00000162613|Q96AE4-2|FUBP1 3.16827122370402 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19142 91.906 32.0 2299100.0 25 0 264990.0 + + 35695 SVFPGARLL 9 104 480.28773891455074 0 480.2875549197197 PEAK CID FTMS 0 0 0 19136 1100092.0 0.1523165443540182 -4 0.4393844604492187 6 Unmodified _SVFPRAVAL_ nc|ENSG00000142453|Q86X55-2|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1;ENSG00000142453|ENST00000327064|CARM1 26.88365393820708 0.1386685954232994 3 {M(Oxidation (M))|F}Q{I|L} 3 -1 23.742 0.0 0.0 2.4769 0.0 0.0 186.09855182172905 381.22626672916255 567.3248185508916 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.3807196863200844 {M(Oxidation (M))|F}Q{I|L} 2.4769 - 50 + 1 1.459 60026.7 1.0 13343 5797 19136 HBL1_DMSO_200M_050219_1,19142 HBL1_DMSO_200M_050219_1,19142,SVFPRAVAL False False SVFPGARLL 91.90617 480.28755491972 114503512.0 19136.0 nc|ENSG00000142453|Q86X55-2|CARM1;;nc|ENSG00000142453|Q86X55-1|CARM1;;ENSG00000142453|ENST00000327064|CARM1 0.3422019481658935 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19143 91.907 40.0 1577400.0 25 0 88948.0 + 27738 DMPLVRLEV 9 97 536.301860083721 0 536.2977172732353 PEAK CID FTMS 0 0 0 19136 865712.75 0.7216470181493803 -1 0.1305465698242187 7 Unmodified _PLMLQNRTV_ ENST00000461241.1_1_22:31523357-31529733:+|nuORF;nc|ENSG00000185133|Q15735-2|INPP5J;nc|ENSG00000185133|Q15735-3|INPP5J;ENSG00000185133|ENST00000331075|INPP5J 15.847184025352805 0.2451986057151378 3 P{I|L}V 3 6 9.6927 0.0 0.0 0.90536 0.0 0.0 246.07505255168056 512.2884615533811 758.3635141050618 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}V 0.90536 - 29 + 1 1.459 56822.6 1.0 13344 5797 19136 HBL1_DMSO_200M_050219_1,19143 HBL1_DMSO_200M_050219_1,19143,PLMLQNRTV False False DMPLVRLEV 91.907349 536.297717273235 22858748.0 19136.0 ENST00000461241.1_1_22:31523357-31529733:+|nuORF;;nc|ENSG00000185133|Q15735-2|INPP5J;;nc|ENSG00000185133|Q15735-3|INPP5J;;ENSG00000185133|ENST00000331075|INPP5J 2.881387035051981 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19144 91.909 80.0 771540.0 25 0 116240.0 + 26524 NVIDNLIVA 9 96 485.78227411203727 969.5499952908746 2 485.7826415896416 MULTI CID FTMS 0 0 0 19136 694181.5 0.0057576547330908 17 -1.841552734375 8 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 29.081581746732265 0.1611639662936252 3 {[VA]|[{I|L}G]}GDVN{I|L} 7 6 27.321 0.0 0.0 2.8179 0.0 0.0 0.0 298.1774985410952 298.1774985410952 13.890948518752388 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.8494850021680094 {[VA]|[{I|L}G]}GDVN{I|L} 2.8179 - 460 1 1.459 51097.6 1.0 13345 5797 19136 HBL1_DMSO_200M_050219_1,19144 HBL1_DMSO_200M_050219_1,19144,NVIDNLIVA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19145 91.911 80.0 729210.0 25 0 191740.0 + 45938 YYYDPLAGTYY 11 80 694.8058883519897 1387.5972237707792 2 694.8069946169853 MULTI CID FTMS 0 0 0 19136 688930.4375 0.4791965361512563 1 -0.1040267944335937 9 Unmodified _YYYDPLAGTYY_ ENSG00000004534|ENST00000266022|RBM6;ENST00000434592.5_1_3:50097096-50127827:+|nuORF;ENST00000441115.5_1_3:50012785-50103056:+|nuORF;nc|ENSG00000004534|P78332-2|RBM6 41.8396318013385 0.1840573104808743 3 YY[{I|L}P]YDAGTYY 11 4 + 63.9 0.0 0.0 4.6051 4.6051 72.945 0.0 0.0 0.0 1.1696980693702486 9.044938854093624 1.1696980693702486 1.1696980693702486 0 0.7429928190999391 2.0 0.5 0.0 YY[{I|L}P]YDAGTYY;[{I|L}P][NP]DYDAGTYY;YYDY[{I|L}P]AGTYY;YY[{I|L}P]DYAGTYY;YY[{I|L}P]YDQTYY;[{I|L}P][NP]YDDAGTYY;[{I|L}P][NP]DDYAGTYY;YYYD[{I|L}P]AGTYY;[{I|L}P][NP]DYDQTYY;[{I|L}P]YYYDAGTYY 4.6051;4.5208;4.3882;4.1712;4.1312;4.0869;4.0869;4.0443;4.0443;4.0443 -;-;-;-;-;-;-;+;-;- + 1506 1 1.459 47887.8 1.0 13346 5797 19136 HBL1_DMSO_200M_050219_1,19145 HBL1_DMSO_200M_050219_1,19145,YYYDPLAGTYY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19146 91.914 127.0 896790.0 25 0 202160.0 + 9083 FFFTARTSF 9 88 562.2835238849506 1122.552494836701 2 562.2832519412041 MULTI CID FTMS 0 0 0 19136 513294.84375 0.4619012301629572 -2 0.239349365234375 10 Unmodified _FFFTARTSF_ ENSG00000153179|ENST00000542104|RASSF3;ENST00000540088.1_1_12:65004304-65005331:+|nuORF;nc|ENSG00000153179|Q86WH2-2|RASSF3 26.020703789607367 0.2001090068861241 3 T{M(Oxidation (M))|F}{M(Oxidation (M))|F}E 4 7 43.175 0.0 0.0 3.8462 0.0 0.0 580.2982593808952 0.0 580.2982593808952 0.0 20.300084529637985 0.0 0.0 0 0.4247425010840047 0.0 0.8494850021680094 0.0 T{M(Oxidation (M))|F}{M(Oxidation (M))|F}E 3.8462 - 179 1 1.459 89391.6 1.0 13347 5797 19136 HBL1_DMSO_200M_050219_1,19146 HBL1_DMSO_200M_050219_1,19146,FFFTARTSF False True FFFTARTSF 91.913605 562.283251941204 20522770.0 19136.0 ENSG00000153179|ENST00000542104|RASSF3;;ENST00000540088.1_1_12:65004304-65005331:+|nuORF;;nc|ENSG00000153179|Q86WH2-2|RASSF3 -0.2955048084259033 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19147 91.915 64.0 875370.0 25 0 123530.0 + -1 RVFEPFTGL 9 94 533.2868228323229 1064.5590927314456 2 533.2901489138603 MULTI CID FTMS 0 0 0 19136 415678.875 0.0759770362953637 -4 0.4393844604492187 11 Oxidation (M) _PM(Oxidation (M))AFVTLTGL_ ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-3|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 30.63653989081413 0.2803493085145199 3 GT{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}TG{I|L} 9 -1 49.857 0.0 0.0 4.6833 0.0 0.0 131.0950642316422 0.0 131.0950642316422 0.0 32.00563815874496 0.0 0.0 0 0.0 0.0 0.6505149978319906 0.3252574989159953 GT{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}TG{I|L} 4.6833 - 500 1 1.459 49252.9 1.0 13348 5797 19136 HBL1_DMSO_200M_050219_1,19147 HBL1_DMSO_200M_050219_1,19147,PMAFVTLTGL False False RVFEPFTGL 91.915166 533.29014891386 2806890.25 19136.0 ENSG00000187240|ENST00000375735|DYNC2H1;;nc|ENSG00000187240|Q8NCM8-3|DYNC2H1;;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 5.882250626881917 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19148 91.924 512.0 326930.0 25 0 19632.0 + 2265 AQFPRFSPVL 10 176 581.3257497341102 1160.6369465350203 2 581.3256713747978 MULTI CID FTMS 0 0 0 19136 319890.15625 0.8826493297580659 -1 0.1305465698242187 12 Unmodified _AQFPRFSPVL_ ENSG00000094914|ENST00000209873|AAAS;nc|ENSG00000094914|Q9NRG9-2|AAAS 38.61474834105838 0.1721950110283317 3 [QA]{M(Oxidation (M))|F}[RV]TMPV{I|L} 10 3 + 47.774 0.0 0.0 4.1162 4.1162 73.1 0.0 0.0 0.0 7.774048429811522 11.685013214134855 7.774048429811522 2.130295957224959 0 1.6307196863200843 0.5228787452803376 0.3054621874040891 0.6861818737241735 [QA]{M(Oxidation (M))|F}[RV]TMPV{I|L};[QA]{M(Oxidation (M))|F}[RP]YAPV{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[RV]TMPV{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[RP]YAPV{I|L};[QA]{M(Oxidation (M))|F}[RV]{M(Oxidation (M))|F}HRT;[QA]RG{M(Oxidation (M))|F}HHPV{I|L};[QA]{M(Oxidation (M))|F}[RV]TQAQ{I|L};[QA]{M(Oxidation (M))|F}[RV][SG]RQ{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[RV]{M(Oxidation (M))|F}H[SG]{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{M(Oxidation (M))|F}HHPV{I|L} 4.1162;3.9326;3.4463;3.2628;3.1094;2.8135;2.7908;2.7755;2.7311;2.593 -;-;-;-;-;-;-;-;-;- 2604 1 1.459 127040.8 1.0 13349 5797 19136 HBL1_DMSO_200M_050219_1,19148 HBL1_DMSO_200M_050219_1,19148,AQFPRFSPVL False True AQFPRFSPVL 91.924203 581.325671374798 3580842.75 19136.0 nc|ENSG00000094914|Q9NRG9-2|AAAS;;ENSG00000094914|ENST00000209873|AAAS 6.820327281951904 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19149 91.929 233.0 254140.0 25 0 15579.0 + 3800 DAIHRYAPHSL 11 76 427.2235442155148 1278.6488032467446 3 427.2230407595634 MULTI CID FTMS 0 0 0 19136 335433.90625 0.6994949493303864 -3 0.35888671875 13 Unmodified _DAIHRYAPHSL_ REV__ENSG00000197959|ENST00000627582|DNM3;REV__nc|ENSG00000197959|Q9UQ16-2|DNM3;REV__nc|ENSG00000197959|Q9UQ16-4|DNM3;REV__nc|ENSG00000197959|Q9UQ16-5|DNM3;REV__nc|ENSG00000197959|Q9UQ16|DNM3 17.44264345198275 0.6723198055858692 3 DA{I|L}{I|L}D 5 -1 62.039 0.0 0.0 4.8519 0.0 0.0 0.0 748.3683120859445 748.3683120859445 35.14014361800122 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.805462187404089 0.0 DA{I|L}{I|L}D 4.8519 - 121 + 1 1.459 58961.4 1.0 13350 5797 19136 HBL1_DMSO_200M_050219_1,19149 HBL1_DMSO_200M_050219_1,19149,DAIHRYAPHSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19150 91.938 533.0 397660.0 25 0 24832.0 + 45110 YPYPYPHTLYL 11 170 713.8559261893067 1425.6972994454134 2 714.3560058474541 MULTI CID FTMS 0 0 0 19136 290371.75 0.4767593138940055 3 -0.3186187744140625 14 Unmodified _YPYPYPHTLYL_ ENSG00000116221|ENST00000360840|MRPL37 68.08070601005525 0.0379666706128858 3 {I|L}{I|L}DESKGE{M(Oxidation (M))|F}{I|L}Y{I|L} 12 9 + 52.804 0.0 0.0 3.7038 3.7038 69.049 0.0 0.0 0.0 0.4524904595219681 7.377203139966326 0.4524904595219681 0.4524904595219681 0 0.6886218330464625 1.3010299956639813 1.066901560044258 0.0 {I|L}{I|L}DESKGE{M(Oxidation (M))|F}{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{I|L}SKGE{M(Oxidation (M))|F}{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}ESKGE{M(Oxidation (M))|F}{I|L}Y{I|L};{I|L}{I|L}DE{I|L}[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{I|L}{I|L}[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}E{I|L}[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}Q{I|L}M{M(Oxidation (M))|F}GT{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}QM{M(Oxidation (M))|F}GT{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{I|L}THY{M(Oxidation (M))|F}{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{I|L}SR{M(Oxidation (M))|F}GT{I|L}Y{I|L} 3.7038;3.672;3.6161;3.4571;3.4254;3.3695;3.3393;3.2835;3.275;3.2686 -;-;-;-;-;-;-;-;-;- 18515 1 1.459 154718.1 1.0 13351 5797 19136 HBL1_DMSO_200M_050219_1,19150 HBL1_DMSO_200M_050219_1,19150,YPYPYPHTLYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19151 91.947 491.0 778260.0 25 0 204200.0 + 3917 DALGKLISI 9 95 929.5672276412196 928.5599511746194 1 929.5685912966728 MULTI CID FTMS 0 0 0 19136 294176.875 0.1103874210737784 -2 0.239349365234375 15 Unmodified _DALGKLISI_ ENSG00000089154|ENST00000300648|GCN1 67.08073823543168 0.0222274355215578 3 SK{I|L}{I|L}S{I|L} 6 4 66.019 0.0 0.0 7.1098 0.0 0.0 269.1371327130875 0.0 269.1371327130875 0.0 39.59183145787911 0.0 0.0 0 1.0 0.0 1.5356668758921828 0.0 SK{I|L}{I|L}S{I|L} 7.1098 - 965 1 1.459 258860.1 1.0 13352 5797 19136 HBL1_DMSO_200M_050219_1,19151 HBL1_DMSO_200M_050219_1,19151,DALGKLISI True True DALGKLISI 91.94667 929.568591296673 688681368.0 19136.0 ENSG00000089154|ENST00000300648|GCN1 6.49115800857544 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19152 91.956 545.0 241880.0 25 0 8889.2 25779 NKAVIWQKSRV 11 146 664.8947966591793 1327.7750403851585 2 664.8940307497978 MULTI CID FTMS 0 0 0 19136 271631.4375 0.787270396608405 -1 0.1305465698242187 16 Unmodified _NKAVIWQKSRV_ ENSG00000064933|ENST00000441310|PMS1;nc|ENSG00000064933|P54277-2|PMS1 12.240655878213236 0.7805268987462184 3 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}N 12 11 84.291 0.0 0.0 6.3483 0.0 0.0 0.0 101.06847235220847 101.06847235220847 49.98048734285414 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.6694451763165201 1.7231975075880328 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}N 6.3483 - 27779 1 1.459 110268.2 1.0 13353 5797 19136 HBL1_DMSO_200M_050219_1,19152 HBL1_DMSO_200M_050219_1,19152,NKAVIWQKSRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19153 91.966 551.0 268560.0 25 0 27034.0 18934 LDADDRFTLLT 11 141 640.3317702743777 1278.6489876155554 2 640.3300048708916 MULTI CID FTMS 0 0 0 19136 268434.71875 0.8280333349045886 -3 0.35888671875 17 Unmodified _LDADDRFTLLT_ ENSG00000133318|ENST00000377819|RTN3;nc|ENSG00000133318|O95197-2|RTN3;nc|ENSG00000133318|O95197-7|RTN3 32.037481411007896 0.3399527776090619 3 {I|L}DAD{I|L}{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]S{I|L} 11 6 + 67.792 0.0 0.0 5.3018 5.3018 78.363 0.0 0.0 0.0 34.87237560515248 3.912513592593953 3.912513592593953 3.0102999566398125 0 1.4978499570595205 1.0457574905606752 0.9916440611282626 0.0 {I|L}DAD{I|L}{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]S{I|L};{I|L}DADV[{I|L}T][W{M(Oxidation (M))|F}]S{I|L};{I|L}DAD{I|L}{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]TV;{I|L}DAD{I|L}{[TV]|[{I|L}S]}A[HD]P{I|L};D{I|L}AD{I|L}{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]S{I|L};{I|L}DAD{I|L}{[TV]|[{I|L}S]}A[YE]G{I|L};{I|L}DAD{I|L}[EP][VP]TP{I|L};{I|L}DAD{I|L}{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T]WV;{I|L}DADV[HM][PA]TP{I|L};{I|L}DA{I|L}D{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]S{I|L} 5.3018;5.0664;4.8664;4.8063;4.7687;4.7539;4.7381;4.7377;4.7085;4.6754 -;-;-;-;-;-;-;-;-;- 2588 + 1 1.459 117772.1 1.0 13354 5797 19136 HBL1_DMSO_200M_050219_1,19153 HBL1_DMSO_200M_050219_1,19153,LDADDRFTLLT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19154 91.977 563.0 355370.0 25 0 58524.0 + -1 LMLQFGLYLL 10 115 613.8475371281845 1225.680521323169 2 613.8464843630791 MULTI CID FTMS 0 0 0 19136 247062.078125 0.9263531035342552 -1 0.1305465698242187 18 Oxidation (M) _LM(Oxidation (M))LQFGLYLL_ REV__nc|ENSG00000140937|P55287-2|CDH11 15.847184025352805 0.5816416552707754 3 [{I|L}P]D[PA]D{I|L}PY{I|L}{I|L} 11 -1 + 30.679 0.0 0.0 2.503 2.503 67.012 0.0 0.0 0.0 1.4735426686651465 7.367585652254185 1.4735426686651465 0.5551732784983123 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}P]D[PA]D{I|L}PY{I|L}{I|L};[{I|L}P]D[WP]{I|L}PY{I|L}{I|L};[{I|L}P][WP]D{I|L}PY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}P[PA]D{I|L}PY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HK]D{I|L}PY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}P[WP]{I|L}PY{I|L}{I|L};{[TV]|[{I|L}S]}[RH]D{I|L}PY{I|L}{I|L};{[TV]|[{I|L}S]}VK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PY{I|L}{I|L};[{I|L}V]SK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PY{I|L}{I|L};{[TV]|[{I|L}S]}V{[HG]|PP}D{I|L}PY{I|L}{I|L} 2.503;2.4577;2.4577;2.3828;2.3375;2.3375;2.0128;1.8836;1.6754;1.6325 -;-;-;-;-;-;-;-;-;- 381 1 1.459 147602.1 1.0 13355 5797 19136 HBL1_DMSO_200M_050219_1,19154 HBL1_DMSO_200M_050219_1,19154,LMLQFGLYLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19155 91.987 562.0 202080.0 25 0 13947.0 + 10698 FVVREDLMGL 10 131 589.8146137162797 1177.6146744993594 2 589.8141357302666 MULTI CID FTMS 0 0 0 19136 211042.03125 1.0 0 0.0 19 Unmodified _FVVREDLMGL_ ENSG00000114416|ENST00000357559|FXR1;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1 33.4449034751529 0.2267874087365337 3 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]SHHMG{I|L} 10 5 + 46.228 0.0 0.0 3.9256 3.9256 52.333 0.0 0.0 0.0 1.5191889624940913 6.927357504614982 1.5191889624940913 0.0 0 1.174742501084005 1.2218487496163564 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]SHHMG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}][{M(Oxidation (M))|F}T]{I|L}MG{I|L};[{M(Oxidation (M))|F}V][WR][RN]MG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]S{I|L}[YE]G{I|L};{[QN]|[E{I|L}]|[KN]}[RV][{M(Oxidation (M))|F}T]{I|L}MG{I|L};{[QN]|[E{I|L}]|[KN]}[RV]SHHMG{I|L};{NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]HHMG{I|L};{[TV]|[{I|L}S]}D[R{I|L}]HHMG{I|L};[{M(Oxidation (M))|F}V]V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R{I|L}MG{I|L};{[QN]|[E{I|L}]|[KN]}[RV]S{I|L}[YE]G{I|L} 3.9256;3.9256;3.7966;3.6905;3.4257;3.4257;3.4143;3.3407;3.3373;3.1906 -;-;-;-;-;-;-;-;-;- 984 1 1.459 87385.7 1.0 13356 5797 19136 HBL1_DMSO_200M_050219_1,19155 HBL1_DMSO_200M_050219_1,19155,FVVREDLMGL False True FVVREDLMGL 91.986855 589.814135730267 1140333.25 19136.0 nc|ENSG00000114416|P51114-2|FXR1;;nc|ENSG00000114416|P51114-3|FXR1;;ENSG00000114416|ENST00000357559|FXR1 4.734678427378337 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19156 92.0 762.0 248530.0 25 0 46337.0 + 9128 FFPKKLLEL 9 159 378.902271396649 1133.6849847901472 3 378.9022399783134 MULTI CID FTMS 0 0 0 19136 234595.453125 0.8277967544912913 -1 0.1305465698242187 20 Unmodified _FFPKKLLEL_ ENSG00000131467|ENST00000590720|PSME3;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3 40.23920728925047 0.0741434193262949 3 {[QN]|[E{I|L}]|[KN]}{I|L}KKP{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 9 6 + 50.643 0.0 0.0 4.4671 4.4671 77.075 0.0 0.0 0.0 14.17655430792022 14.17655430792022 14.17655430792022 3.979400086720375 0 0.2887254899964357 1.5228787452803376 0.5138793319624578 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}KKP{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}KKP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}KK{I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F};[KP][K{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}E;{I|L}{I|L}EKKP{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}KK{I|L}M{I|L}{M(Oxidation (M))|F};[KP][K{I|L}]{I|L}E{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{I|L}{I|L}KKP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}E;[KP][K{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}KK{I|L}[YV]E 4.4671;4.1161;3.4134;3.2166;3.1558;3.0624;3.0509;3.0179;2.9511;2.9307 -;-;-;-;-;-;-;-;-;- 541 1 1.459 150179.6 1.0 13357 5797 19136 HBL1_DMSO_200M_050219_1,19156 HBL1_DMSO_200M_050219_1,19156,FFPKKLLEL True True FFPKKLLEL 92.000036 378.902239978313 3230255.5 19136.0 ENSG00000131467|ENST00000590720|PSME3;;nc|ENSG00000131467|P61289-2|PSME3;;nc|ENSG00000131467|P61289-3|PSME3 2.6445221503575644 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19158 92.004 6.9 8178800.0 25 0 528720.0 + 20483 LLLDVPTAAV 10 101 506.3079342698748 1010.6013156065496 2 506.3081848025322 MULTI CID FTMS 0 0 0 19157 10473137.0 0.8877297986897914 1 -0.1326217651367187 1 Unmodified _LLLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 7.289230182591677 0.6929195370588109 3 V 1 9 14.604 0.0 0.0 1.4451 0.0 0.0 893.5246229569386 0.0 893.5246229569386 0.0 5.223703006718594 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.4451 + + 165 + 1 1.436 48810.8 1.0 13358 5798 19157 HBL1_DMSO_200M_050219_1,19158 HBL1_DMSO_200M_050219_1,19158,LLLDVPTAAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19159 92.005 22.0 4525500.0 25 0 1575100.0 + 10182 FQDEINWRL 9 50 610.8075564442081 1219.600559955216 2 610.8074218630791 MULTI CID FTMS 0 0 0 19157 1912177.5 0.5608902896155977 2 -0.2145919799804687 2 Unmodified _FQDEINWRL_ ENSG00000102226|ENST00000377107|USP11;ENST00000469080.5_1_X:47092634-47106681:+|nuORF;nc|ENSG00000102226|P51784|USP11 24.99096001346401 0.2132109383330889 3 WN{I|L}ED{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7 7 32.056 0.0 0.0 2.6284 0.0 0.0 287.19624526191564 0.0 287.19624526191564 0.0 25.06630082558985 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 WN{I|L}ED{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.6284 - 158 1 1.436 77842.0 1.0 13359 5798 19157 HBL1_DMSO_200M_050219_1,19159 HBL1_DMSO_200M_050219_1,19159,FQDEINWRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19160 92.007 67.0 541380.0 25 0 40298.0 -1 0 67 753.8759296179318 3011.474612605327 4 754.1276733279228 MULTI CID FTMS 0 0 0 19157 1985622.375 1.0 0 0.0 3 3 A{I|L}S[{I|L}A]SD{I|L}HA[HK] 12 -1 37.317 0.0 0.0 1.2392 0.0 0.0 1749.8035443453643 0.0 1749.8035443453643 0.0 27.85335007137462 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 A{I|L}S[{I|L}A]SD{I|L}HA[HK] 1.2392 - 294 + 1 1.436 34889.5 1.0 13360 5798 19157 HBL1_DMSO_200M_050219_1,19160 HBL1_DMSO_200M_050219_1,19160, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19161 92.008 39.0 1971000.0 25 0 269380.0 + 14961 ILNRDLYL 8 84 510.2979978067708 1018.5814426803416 2 510.2979614138603 MULTI CID FTMS 0 0 0 19157 1004414.0625 0.6813294335841562 1 -0.1326217651367187 4 Unmodified _ILNRDLYL_ REV__ENSG00000099769|ENST00000215539|IGFALS;REV__nc|ENSG00000099769|P35858-2|IGFALS 23.1484247019978 0.5573009939494978 3 V{I|L}VY{I|L} 5 -1 46.766 0.0 0.0 4.5913 0.0 0.0 413.2030811994157 0.0 413.2030811994157 0.0 22.617712413948887 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 V{I|L}VY{I|L} 4.5913 - 352 1 1.436 61897.4 1.0 13361 5798 19157 HBL1_DMSO_200M_050219_1,19161 HBL1_DMSO_200M_050219_1,19161,ILNRDLYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19162 92.01 48.0 1206700.0 25 0 213850.0 + 19961 LIGEFLEKV 9 83 524.3084990697556 1046.6024452063111 2 524.3082763552666 MULTI CID FTMS 0 0 0 19157 662734.75 0.7314077681789604 -1 0.1040267944335937 5 Unmodified _LIGEFLEKV_ ENSG00000101654|ENST00000383314|RNMT;nc|ENSG00000101654|O43148-2|RNMT 21.53697664764585 0.2571576504437394 3 {I|L}{I|L}W 3 7 50.005 0.0 0.0 4.7778 0.0 0.0 0.0 631.346953779841 631.346953779841 32.02918571131826 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L}W 4.7778 - 131 + 1 1.436 49446.9 1.0 13362 5798 19157 HBL1_DMSO_200M_050219_1,19162 HBL1_DMSO_200M_050219_1,19162,LIGEFLEKV False True LIGEFLEKV 92.009578 524.308276355267 7758540.5 19157.0 ENSG00000101654|ENST00000383314|RNMT;;nc|ENSG00000101654|O43148-2|RNMT 4.113334019978841 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19163 92.017 399.0 105110.0 25 0 5138.7 -1 0 67 1164.5395707415664 3490.5968828249 3 1164.872851550579 MULTI CID FTMS 0 0 0 19157 579731.8125 0.4635268020444592 4 -0.4112625122070312 6 3 N{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}DDQ 8 -1 29.641 0.0 0.0 0.84917 0.0 0.0 1746.7999600727492 731.349382319769 2478.149342392518 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}DDQ 0.84917 - 453 + 1 1.436 31876.6 1.0 13363 5798 19157 HBL1_DMSO_200M_050219_1,19163 HBL1_DMSO_200M_050219_1,19163, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19164 92.025 462.0 423350.0 25 0 138220.0 -1 0 127 904.5105359128436 0 904.5069457888604 PEAK CID FTMS 0 0 0 19157 322786.375 0.2825726489338571 6 -0.6238479614257812 7 3 {I|L}AS{I|L}MVS 7 -1 27.325 0.0 0.0 1.5122 0.0 0.0 921.5137953590868 181.09827600650627 1102.6120713655932 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 {I|L}AS{I|L}MVS 1.5122 - 3990 + 1 1.436 128749.1 1.0 13364 5798 19157 HBL1_DMSO_200M_050219_1,19164 HBL1_DMSO_200M_050219_1,19164, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19165 92.029 233.0 518510.0 25 0 37848.0 + 16357 IYPEVVHMF 9 128 567.786142174349 1133.557731415498 2 567.7861816287041 MULTI CID FTMS 0 0 0 19157 314704.625 0.7241990269653454 -1 0.1040267944335937 8 Unmodified _IYPEVVHMF_ ENSG00000078304|ENST00000694906|PPP2R5C;ENST00000553730.5_1_14:102276279-102348623:+|nuORF;nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C 32.116972079565 0.1225432171549407 3 [Y{I|L}]PEVVHM{M(Oxidation (M))|F} 9 0 + 47.533 0.0 0.0 4.1932 4.1932 82.531 0.0 0.0 0.0 6.554556341805764 1.0873530347330274 1.0873530347330274 9.366130211356063 0 0.3252574989159953 2.0 0.0 0.0 + + [Y{I|L}]PEVVHM{M(Oxidation (M))|F};[Y{I|L}]PEVV[DN]SV;[Y{I|L}]{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VYSV;[Y{I|L}]P{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VYSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EVVHM{M(Oxidation (M))|F};[Y{I|L}]{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{M(Oxidation (M))|F}T]S{I|L};[Y{I|L}]{M(Oxidation (M))|F}[SG][KA]YSV;[Y{I|L}]P{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}T]S{I|L};[Y{I|L}]{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[VA]|[{I|L}G]}M{M(Oxidation (M))|F};[Y{I|L}]P{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[VA]|[{I|L}G]}M{M(Oxidation (M))|F} 4.1932;3.367;2.8109;2.6354;2.3189;1.9368;1.7663;1.7613;1.7018;1.5263 +;-;-;-;-;-;-;-;-;- + 813 + 1 1.436 97340.3 1.0 13365 5798 19157 HBL1_DMSO_200M_050219_1,19165 HBL1_DMSO_200M_050219_1,19165,IYPEVVHMF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19166 92.039 535.0 398260.0 25 0 29703.0 + 34080 SLLGDDALVQV 11 186 565.3082011185419 1128.6018493038837 2 565.3079101443291 MULTI CID FTMS 0 0 0 19157 328531.75 0.0782764990079382 -3 0.3433761596679687 9 Unmodified _SLLGDDALVQV_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 96.11092074494114 0.0004512120432046 3 {NN|[MP]|[D{I|L}]|[EV]}AGD{I|L}S{I|L}VN{I|L} 11 6 + 84.058 0.0 0.0 7.448 7.448 84.972 0.0 0.0 0.0 9.700218161554147 7.5397888757737235 7.5397888757737235 3.0102999566398125 0 0.7914478256039672 1.3979400086720375 2.1307196863200843 0.0916328861051033 {NN|[MP]|[D{I|L}]|[EV]}AGD{I|L}S{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AGDVT{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}QD{I|L}S{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AGD{I|L}VTVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}QDVT{I|L}VN{I|L};[AG]VED{I|L}S{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AGDV{I|L}TVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}GAD{I|L}S{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AGS{I|L}D{I|L}VN{I|L};[AG]VEDVT{I|L}VN{I|L} 7.448;7.1813;6.8653;6.7945;6.5986;6.5885;6.5278;6.5253;6.5157;6.3218 -;-;-;-;-;-;-;-;-;- 8667 1 1.436 165779.9 1.0 13366 5798 19157 HBL1_DMSO_200M_050219_1,19166 HBL1_DMSO_200M_050219_1,19166,SLLGDDALVQV True True SLLGDDALVQV 92.038769 565.307910144329 34550972.0 19157.0 ENST00000568291.2_1_16:70588380-70590279:+|nuORF;;ENSG00000189091|ENST00000302516|SF3B3 6.464975357055664 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19167 92.048 551.0 271370.0 25 0 27976.0 + 44014 YIFSGQIRL 9 138 548.8122689789396 1095.6099850246792 2 548.8112670779228 MULTI CID FTMS 0 0 0 19157 292692.0625 1.0 0 0.0 10 Unmodified _YIFSGQIRL_ ENSG00000261609|ENST00000648994|GAN 47.74868867922204 0.0453060283459952 3 Y{I|L}{M(Oxidation (M))|F}SGQ{I|L}R{I|L} 9 0 + 76.464 0.0 0.0 6.9791 6.9791 90.733 0.0 0.0 0.0 51.3840306819838 9.463728584247631 9.463728584247631 9.208187539523747 0 0.4247425010840047 2.0 0.3494850021680094 0.3252574989159953 + + Y{I|L}{M(Oxidation (M))|F}SGQ{I|L}R{I|L};Y{I|L}{M(Oxidation (M))|F}SG[AG]{I|L}R{I|L};Y{I|L}[YQ]Q{I|L}R{I|L};Y{I|L}{M(Oxidation (M))|F}{I|L}[WK]QV;Y{I|L}{M(Oxidation (M))|F}{I|L}[WK]N{I|L};Y{I|L}{I|L}{M(Oxidation (M))|F}[WK]QV;Y{I|L}[YQ][AG]{I|L}R{I|L};Y{I|L}{I|L}{[SA]|[TG]}[R{M(Oxidation (M))|F}]QV;Y{I|L}{I|L}{M(Oxidation (M))|F}[WK]N{I|L};Y{I|L}{I|L}{[SA]|[TG]}[R{M(Oxidation (M))|F}]N{I|L} 6.9791;6.1387;4.6322;4.3522;4.1119;3.9167;3.7868;3.7486;3.6764;3.5084 +;-;-;-;-;-;-;-;-;- + 695 + 1 1.436 120707.8 1.0 13367 5798 19157 HBL1_DMSO_200M_050219_1,19167 HBL1_DMSO_200M_050219_1,19167,YIFSGQIRL True True YIFSGQIRL 92.048448 548.811267077923 2386449.25 19157.0 ENSG00000261609|ENST00000648994|GAN 4.192878246307373 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19168 92.058 535.0 476120.0 25 0 29409.0 + 22797 TQLPERAIFQI 11 183 657.9033904543894 1313.7922279755787 2 657.9045287966728 MULTI CID FTMS 0 0 0 19157 260787.40625 1.0 0 0.0 11 Unmodified _LQTIKKELTQI_ ENST00000524792.5_1_11:108158320-108236232:+|nuORF;ENSG00000149311|ENST00000675843|ATM 20.41453444215458 0.6105011870913812 3 N{I|L}V{I|L}YE{I|L}{I|L}[{I|L}P] 10 7 39.034 0.0 0.0 2.9711 0.0 0.0 128.09553725410314 0.0 128.09553725410314 0.0 7.155042148503519 0.0 0.0 0 0.242992819099939 0.0 0.8252574989159953 1.674742501084005 N{I|L}V{I|L}YE{I|L}{I|L}[{I|L}P] 2.9711 - 26916 1 1.436 184929.8 1.0 13368 5798 19157 HBL1_DMSO_200M_050219_1,19168 HBL1_DMSO_200M_050219_1,19168,LQTIKKELTQI False False TQLPERAIFQI 92.057875 657.904528796673 2473694.0 19157.0 ENST00000524792.5_1_11:108158320-108236232:+|nuORF;;ENSG00000149311|ENST00000675843|ATM 5.7471052805582685 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19169 92.07 677.0 491900.0 25 0 59224.0 + 15546 IPWKVPGL 8 186 455.2814043667098 908.5482558002196 2 455.2816345095634 MULTI CID FTMS 0 0 0 19157 270318.9375 0.5465304294578067 -3 0.3433761596679687 12 Unmodified _IPWKVPGL_ ENSG00000174231|ENST00000304992|PRPF8 49.66892048692302 0.1408045912742846 3 {I|L}PWKVPG{I|L} 8 0 + 63.83 0.0 0.0 7.0255 7.0255 86.291 0.0 0.0 0.0 7.838096733120281 6.83011624767822 6.83011624767822 4.771212547196626 0 0.5796896906561032 1.5228787452803376 0.0 0.0 + + {I|L}PWKVPG{I|L};{I|L}PWKVGP{I|L};{I|L}{I|L}[TA]VK[HQ];WP{I|L}KVPG{I|L};{I|L}PWKVPAV;WP{I|L}KVGP{I|L};WP{I|L}KVPAV;{I|L}PEG[RK]P{I|L};{I|L}{I|L}{[SA]|[TG]}K{I|L}[HQ];{I|L}[TA]{I|L}VK[HQ] 7.0255;6.5003;6.2737;6.1628;5.7814;5.6376;4.9187;3.6637;3.5332;3.2097 +;-;-;-;-;-;-;-;-;- + 863 + 1 1.436 256394.7 1.0 13369 5798 19157 HBL1_DMSO_200M_050219_1,19169 HBL1_DMSO_200M_050219_1,19169,IPWKVPGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19170 92.083 703.0 287240.0 25 0 27904.0 + 31533 RQKRKVWVQSL 11 192 476.62409106967095 1426.850443809213 3 476.9596435427666 MULTI CID FTMS 0 0 0 19157 230183.75 0.4004004286952735 4 -0.4112625122070312 13 Unmodified _RQKRKVWVQSL_ ENSG00000115966|ENST00000264110|ATF2;nc|ENSG00000115966|P15336-2|ATF2;nc|ENSG00000115966|P15336-4|ATF2;nc|ENSG00000115966|P15336-5|ATF2 6.234356020891411 0.8457338374961867 3 S{I|L} 2 9 15.529 0.0 0.0 1.0883 0.0 0.0 1208.723198791438 0.0 1208.723198791438 0.0 3.5906717222802342 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + S{I|L} 1.0883 + + 2103 + 1 1.436 164050.5 1.0 13370 5798 19157 HBL1_DMSO_200M_050219_1,19170 HBL1_DMSO_200M_050219_1,19170,RQKRKVWVQSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19171 92.089 314.0 311750.0 25 0 81571.0 43826 YFENKVPHGLS 11 72 430.88824457631785 0 430.8881713747978 PEAK CID FTMS 0 0 0 19157 206181.65625 0.4272806687319798 123 -11.354148864746094 14 Unmodified _YFENKVPHGLS_ ENST00000474235.1_1_22:39496283-39496472:+|nuORF 5.731851221503515 0.47618401536486 3 K 1 10 1.5938 0.0 0.0 0.18538 0.0 0.0 337.4596423735357 391.1736239068969 728.6332662804326 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.18538 + + 2 + 1 1.436 80721.9 1.0 13371 5798 19157 HBL1_DMSO_200M_050219_1,19171 HBL1_DMSO_200M_050219_1,19171,YFENKVPHGLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19172 92.099 583.0 192480.0 25 0 8490.9 -1 0 133 782.3614610059393 2344.062553618018 3 782.6946288943291 MULTI CID FTMS 0 0 0 19157 176672.046875 0.1974537726015109 6 -0.6238479614257812 15 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 60.072 0.0 0.0 2.5627 0.0 0.0 0.0 1303.4520549210054 1303.4520549210054 15.72051538364164 0.0 0.0 0.0 0 1.5 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.5627 - 12224 1 1.436 89003.7 1.0 13372 5798 19157 HBL1_DMSO_200M_050219_1,19172 HBL1_DMSO_200M_050219_1,19172, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19173 92.11 566.0 126540.0 25 0 7946.7 -1 0 102 907.9623031692408 1813.9100534052816 2 908.4646484255792 MULTI CID FTMS 0 0 0 19157 184886.8125 1.0 0 0.0 16 3 [{I|L}T]GNV{I|L} 6 -1 54.859 0.0 0.0 3.0243 0.0 0.0 0.0 1213.538044149909 1213.538044149909 43.555124301252064 0.0 0.0 0.0 0 0.5 2.0 1.0941876774005248 0.8026048219588937 [{I|L}T]GNV{I|L} 3.0243 - 487 1 1.436 54369.5 1.0 13373 5798 19157 HBL1_DMSO_200M_050219_1,19173 HBL1_DMSO_200M_050219_1,19173, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19174 92.122 683.0 253600.0 25 0 17652.0 + 3740 DAFTFRHFL 9 204 577.293256846978 1152.571960760756 2 577.2934448122978 MULTI CID FTMS 0 0 0 19157 133139.3125 0.2336814373659013 4 -0.4112625122070312 17 Unmodified _DAFTFRHFL_ ENSG00000167487|ENST00000300976|KLHL26 30.7034409873982 0.1405282614900322 3 {[DA]|[EG]}{M(Oxidation (M))|F}T 4 5 27.791 0.0 0.0 2.4112 0.0 0.0 0.0 715.3713361774076 715.3713361774076 8.610016720052226 0.0 0.0 0.0 0 0.3054621874040891 1.154901959985743 0.0 0.0 + {[DA]|[EG]}{M(Oxidation (M))|F}T 2.4112 + + 360 + 1 1.436 130383.3 1.0 13374 5798 19157 HBL1_DMSO_200M_050219_1,19174 HBL1_DMSO_200M_050219_1,19174,DAFTFRHFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19175 92.133 618.0 53615.0 25 0 6997.3 -1 0 44 1054.587451159954 0 1054.587451159954 PEAK CID FTMS 0 0 0 -1 0 18 3 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.18885 0.0 0.0 1327.7840809314332 629.3250202125895 1957.1091011440224 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.18885 - 11 + 1 1.436 28895.9 1.0 13375 5798 19157 HBL1_DMSO_200M_050219_1,19175 HBL1_DMSO_200M_050219_1,19175, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19177 92.137 8.3 7092300.0 25 0 1844400.0 + + -1 RPYGVGLLI 9 62 494.3029717715175 986.591390609835 2 494.3029968142509 MULTI CID FTMS 0 0 0 19176 5400563.0 1.0 0 0.0 1 Carbamidomethyl (C) _LLRC(Carbamidomethyl (C))SLLL_ nc|ENSG00000129084|P25786-2|PSMA1;ENSG00000129084|ENST00000396394|PSMA1 26.88365393820708 0.4786498634179528 3 TP[KP]G{I|L}{I|L}{I|L} 8 -1 40.342 0.0 0.0 4.0891 0.0 0.0 149.05133254218907 0.0 149.05133254218907 0.0 17.120528278430207 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 TP[KP]G{I|L}{I|L}{I|L} 4.0891 - 117 1 1.422 49319.7 1.0 13376 5799 19176 HBL1_DMSO_200M_050219_1,19177 HBL1_DMSO_200M_050219_1,19177,LLRCSLLL False False RPYGVGLLI 92.136914 494.302996814251 97565176.0 19176.0 nc|ENSG00000129084|P25786-2|PSMA1;;ENSG00000129084|ENST00000396394|PSMA1 2.6924889087677 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19178 92.138 24.0 2644200.0 25 0 385060.0 + 41571 VPPENIIYI 9 84 529.3002944283521 1056.586035923504 2 529.3008300662041 MULTI CID FTMS 0 0 0 19176 2267554.5 1.0 0 0.0 2 Unmodified _VPPENIIYI_ ENSG00000155096|ENST00000337198|AZIN1;ENST00000522311.1_1_8:103848756-103855898:-|nuORF 25.399314129420983 0.2080152500878129 3 N{I|L}V{I|L}Y{I|L} 6 5 45.01 0.0 0.0 4.26 0.0 0.0 323.14912612129064 0.0 323.14912612129064 0.0 30.406075122407685 0.0 0.0 0 0.7742275032520141 0.0 0.0 1.0356668758921828 N{I|L}V{I|L}Y{I|L} 4.26 - 208 1 1.422 53878.1 1.0 13377 5799 19176 HBL1_DMSO_200M_050219_1,19178 HBL1_DMSO_200M_050219_1,19178,VPPENIIYI False True VPPENIIYI 92.138093 529.300830066204 128146568.0 19176.0 ENST00000522311.1_1_8:103848756-103855898:-|nuORF;;ENSG00000155096|ENST00000337198|AZIN1 2.850059906641642 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19179 92.139 2.9 20452000.0 25 0 3529200.0 + 4513 DAYLPLRL 8 66 480.7794978968272 959.5444428604544 2 480.7793762087822 MULTI CID FTMS 0 0 0 19176 16429097.0 0.3949958464252522 -2 0.2366485595703125 3 Unmodified _DAYLPLRL_ ENSG00000062822|ENST00000440232|POLD1 28.486842064014134 0.4448922141344407 3 {[DA]|[EG]}Y{I|L}{I|L} 5 3 46.51 0.0 0.0 4.8471 0.0 0.0 0.0 381.22626672916255 381.22626672916255 39.5205343810445 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 {[DA]|[EG]}Y{I|L}{I|L} 4.8471 - 48 + 1 1.422 50950.2 1.0 13378 5799 19176 HBL1_DMSO_200M_050219_1,19179 HBL1_DMSO_200M_050219_1,19179,DAYLPLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19180 92.14 11.0 4714600.0 25 0 701120.0 + 24786 MPIKINLI 8 75 471.2962775002167 940.5780020672336 2 471.2962829470634 MULTI CID FTMS 0 0 0 19176 4730972.0 0.1022798842144214 -4 0.4759979248046875 4 Unmodified _MPIKINLI_ ENSG00000134001|ENST00000256383|EIF2S1 46.92087301778293 0.1537303740847981 3 [{I|L}P]K{I|L}NM{I|L}{I|L} 8 2 + 46.159 0.0 0.0 4.9075 4.9075 76.995 0.0 0.0 0.0 4.643331241078172 -5.796896906561031 -5.796896906561031 3.0102999566398125 0 0.7742275032520141 2.0 0.0 0.0 [{I|L}P]K{I|L}NM{I|L}{I|L};[{I|L}P]K{I|L}MN{I|L}{I|L};MP{I|L}[R{I|L}]RR;[{I|L}P]K{I|L}GGM{I|L}{I|L};[{I|L}P]K{I|L}MGG{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KPM{I|L}{I|L};[{I|L}P]M[K{I|L}]N{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KNN{I|L}{I|L};[K{I|L}]P{I|L}NM{I|L}{I|L};[K{I|L}]P{I|L}MN{I|L}{I|L} 4.9075;4.5874;4.3913;3.9227;3.6027;3.0203;2.8054;2.7003;2.6969;2.3769 -;-;-;-;-;-;-;-;-;- 434 1 1.422 49069.2 1.0 13379 5799 19176 HBL1_DMSO_200M_050219_1,19180 HBL1_DMSO_200M_050219_1,19180,MPIKINLI False True MPIKINLI 92.14045 471.296282947063 1068777280.0 19176.0 ENSG00000134001|ENST00000256383|EIF2S1 1.902491927146912 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19181 92.142 48.0 1768700.0 25 0 197350.0 + 18359 KVPDVLPVL 9 85 490.313642983486 978.612733033772 2 490.3141967654228 MULTI CID FTMS 0 0 0 19176 1339435.875 1.0 0 0.0 5 Unmodified _KVPDVLPVL_ ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA 52.268347100219714 0.0353964759249114 3 [VP]{[TV]|[{I|L}S]}AA{I|L}PV{I|L} 10 4 + 55.463 0.0 0.0 5.6675 5.6675 82.748 0.0 0.0 0.0 5.440680443502757 6.307649159064397 5.440680443502757 5.440680443502757 0 1.555462187404089 1.3010299956639813 0.3252574989159953 0.0 [VP]{[TV]|[{I|L}S]}AA{I|L}PV{I|L};[{I|L}P][VS]AA{I|L}PV{I|L};[VP]{[TV]|[{I|L}S]}[RV]PV{I|L};[{I|L}P][VS][RV]PV{I|L} 5.6675;5.1115;5.0521;4.4962 -;-;-;- 141 1 1.422 67892.5 1.0 13380 5799 19176 HBL1_DMSO_200M_050219_1,19181 HBL1_DMSO_200M_050219_1,19181,KVPDVLPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19182 92.143 33.0 2044800.0 25 0 444840.0 20181 LLACFLILI 9 84 509.8220242588709 1017.6294955845418 2 509.8182861208916 MULTI CID FTMS 0 0 0 19176 1110216.0 1.0 0 0.0 6 Unmodified _LLACFLILI_ ENST00000561424.5_1_15:45009826-45011035:+|nuORF 28.17323086031832 0.1727213568982648 3 [HV]PV{I|L}D{I|L}{I|L}{I|L} 9 6 + 33.822 0.0 0.0 3.3237 3.3237 70.436 0.0 0.0 0.0 6.989700043360191 5.6424927368726046 5.6424927368726046 1.7609125905568137 0 0.0 1.0969100130080565 0.0 0.0 [HV]PV{I|L}D{I|L}{I|L}{I|L};[HV]PV{I|L}EV{I|L}{I|L};[HV]VP{I|L}D{I|L}{I|L}{I|L};[HV]VP{I|L}EV{I|L}{I|L};[HV]PVD{I|L}{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}D{I|L}{I|L}{I|L};[HV]PDV{I|L}{I|L}{I|L}{I|L};[HV]VPD{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}[YR]D{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}EV{I|L}{I|L} 3.3237;3.1506;3.0278;2.8548;2.8548;2.6368;2.559;2.559;2.5416;2.4637 -;-;-;-;-;-;-;-;-;- 725 1 1.422 57727.6 1.0 13381 5799 19176 HBL1_DMSO_200M_050219_1,19182 HBL1_DMSO_200M_050219_1,19182,LLACFLILI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19183 92.145 66.0 1366700.0 25 0 137730.0 20769 LLTSALSRL 9 83 487.3068353895159 972.599117845832 2 487.8056213259697 MULTI CID FTMS 0 0 0 19176 943726.3125 0.7960901922179018 -2 0.2366485595703125 7 Unmodified _LLTSALSRL_ ENST00000230538.11_1_6:112462098-112462671:-|nuORF 20.453626601364224 0.2830276176381075 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L}SR{I|L} 8 5 + 43.777 0.0 0.0 4.501 4.501 75.679 0.0 0.0 0.0 15.104803336520844 4.291260164497601 4.291260164497601 3.0102999566398125 0 0.0 0.0 0.7134679910804405 0.3054621874040891 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L}SR{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}{I|L}SR{I|L} 4.501;4.1915 -;- 125 + 1 1.422 74339.1 1.0 13382 5799 19176 HBL1_DMSO_200M_050219_1,19183 HBL1_DMSO_200M_050219_1,19183,LLTSALSRL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19184 92.146 53.0 1257900.0 25 0 110320.0 + 29284 QIFNGTFVKL 10 95 583.8322092769051 1165.6498656206102 2 583.8324462771416 MULTI CID FTMS 0 0 0 19176 857976.5 0.0486188744773611 -3 0.3671951293945312 8 Unmodified _QIFNGTFVKL_ ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF 47.594388314883695 0.0942698883389255 3 Q{I|L}{M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L} 10 0 + 77.522 0.0 0.0 6.6506 6.6506 89.151 0.0 0.0 0.0 46.24971463140392 11.53212513775344 11.53212513775344 9.164539485499247 0 0.3252574989159953 2.0 0.3494850021680094 0.5649093276264391 + + Q{I|L}{M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L};Q{I|L}{M(Oxidation (M))|F}GG{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L} 6.6506;5.8643 +;- + 427 + 1 1.422 57754.5 1.0 13383 5799 19176 HBL1_DMSO_200M_050219_1,19184 HBL1_DMSO_200M_050219_1,19184,QIFNGTFVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19185 92.148 76.0 522790.0 25 0 117880.0 -1 0 64 545.328950023606 1632.965020671018 3 545.6633788943291 MULTI CID FTMS 0 0 0 19176 654934.5625 0.32465153788052 -2 0.2366485595703125 9 3 {I|L} 1 -1 12.764 0.0 0.0 0.78166 0.0 0.0 1501.869834369063 0.0 1501.869834369063 0.0 1.7951097132083405 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.78166 - 37 + 1 1.422 39858.0 1.0 13384 5799 19176 HBL1_DMSO_200M_050219_1,19185 HBL1_DMSO_200M_050219_1,19185, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19186 92.149 77.0 1137500.0 25 0 135320.0 + 33964 SLIEKYFSV 9 115 543.297522355395 1084.58049177759 2 543.2979003787041 MULTI CID FTMS 0 0 0 19176 661382.4375 0.5302762697272881 -2 0.2366485595703125 10 Unmodified _SLIEKYFSV_ ENSG00000182481|ENST00000330459|KPNA2 32.78568957990786 0.1150597335874693 3 {[TV]|[{I|L}S]}{I|L}[HT]{I|L}YGD 9 6 49.689 0.0 0.0 4.5814 0.0 0.0 0.0 82.06701074771718 82.06701074771718 13.680993120779938 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.9802046884880936 0.0 {[TV]|[{I|L}S]}{I|L}[HT]{I|L}YGD 4.5814 - 1120 + 1 1.422 69088.6 1.0 13385 5799 19176 HBL1_DMSO_200M_050219_1,19186 HBL1_DMSO_200M_050219_1,19186,SLIEKYFSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19187 92.151 94.0 846580.0 25 0 143920.0 + 1504 ALHDILTEI 9 98 512.7882844882437 1023.5620160432874 2 512.7880737185478 MULTI CID FTMS 0 0 0 19176 568171.9375 1.0 0 0.0 11 Unmodified _ALHDILTEI_ ENSG00000111445|ENST00000454402|RFC5;nc|ENSG00000111445|P40937-2|RFC5 38.17557092003332 0.0854718145212029 3 {NN|[MP]|[D{I|L}]|[EV]}HA{I|L}{I|L}TE{I|L} 9 2 + 43.949 0.0 0.0 4.2938 4.2938 74.413 0.0 0.0 0.0 4.411329172721736 4.163617425480886 4.163617425480886 2.7422750325201406 0 0.6069758080123702 1.0 0.7134679910804405 0.0 {NN|[MP]|[D{I|L}]|[EV]}HA{I|L}{I|L}TE{I|L};{NN|[MP]|[D{I|L}]|[EV]}HA{I|L}T{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}HA{I|L}TE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HV]A{I|L}TE{I|L};{NN|[MP]|[D{I|L}]|[EV]}H{I|L}A{I|L}TE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}{I|L}D[R{M(Oxidation (M))|F}];[HD]{I|L}A{I|L}{I|L}TE{I|L};[H{I|L}]AD{I|L}{I|L}TE{I|L};{[QN]|[E{I|L}]|[KN]}[HV]AT{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}H{I|L}AT{I|L}E{I|L} 4.2938;4.0258;3.887;3.8628;3.8276;3.7553;3.7222;3.6448;3.5949;3.5597 -;-;-;-;-;-;-;-;-;- 901 1 1.422 66493.8 1.0 13386 5799 19176 HBL1_DMSO_200M_050219_1,19187 HBL1_DMSO_200M_050219_1,19187,ALHDILTEI True True ALHDILTEI 92.151479 512.788073718548 6116709.5 19176.0 ENSG00000111445|ENST00000454402|RFC5;;nc|ENSG00000111445|P40937-2|RFC5 4.024391412734985 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19188 92.158 379.0 534580.0 25 0 83644.0 + 16492 KALGDQILFV 10 154 552.3270017463456 0 552.3270751833916 PEAK CID FTMS 0 0 0 19176 538116.625 1.0 0 0.0 12 Unmodified _KALGDQILFV_ ENSG00000197265|ENST00000355904|GTF2E2;ENST00000522833.5_1_8:30442658-30469842:-|nuORF 72.96794272382148 0.0041322990683518 3 {M(Oxidation (M))|F}{I|L}{I|L}QKD 6 8 57.89 0.0 0.0 5.2501 0.0 0.0 117.08103115322838 238.12029443912343 355.20132559235185 0.0 0.0 0.0 0.0 0 1.1861818737241734 0.0 1.305462187404089 1.0044321917401078 {M(Oxidation (M))|F}{I|L}{I|L}QKD 5.2501 - 773 + 1 1.422 156868.8 1.0 13387 5799 19176 HBL1_DMSO_200M_050219_1,19188 HBL1_DMSO_200M_050219_1,19188,KALGDQILFV True True KALGDQILFV 92.158294 552.327075183392 4927561.0 19176.0 ENST00000522833.5_1_8:30442658-30469842:-|nuORF;;ENSG00000197265|ENST00000355904|GTF2E2 5.311982949574788 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19189 92.16 61.0 2115900.0 25 0 236460.0 + 39590 VDALELGPPVV 11 116 554.8165547673492 1107.6185566014983 2 554.8163940310478 MULTI CID FTMS 0 0 0 19176 461924.5 0.2437927581188473 -2 0.2366485595703125 13 Unmodified _VDALELGPPVV_ ENSG00000114779|ENST00000361143|ABHD14B;ENST00000487005.1_1_3:52003444-52008077:-|nuORF;nc|ENSG00000114779|Q96IU4-2|ABHD14B 19.361941925380144 0.6323962752489956 3 {I|L}{I|L}DVRDD{I|L}G 9 10 52.916 0.0 0.0 4.7775 0.0 0.0 0.0 108.07037479901706 108.07037479901706 10.24735947860492 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.3252574989159953 {I|L}{I|L}DVRDD{I|L}G 4.7775 - 19756 1 1.422 105165.5 1.0 13388 5799 19176 HBL1_DMSO_200M_050219_1,19189 HBL1_DMSO_200M_050219_1,19189,VDALELGPPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19190 92.165 285.0 634580.0 25 0 191240.0 19838 LHIYANYR 8 127 350.5233730630348 1048.5482897893044 3 350.5232421755791 MULTI CID FTMS 0 0 0 19176 368872.84375 0.7894898383690023 -1 0.1326217651367187 14 Unmodified _LHIYANYR_ ENSG00000140688|ENST00000327237|RUSF1;ENST00000541442.5_1_16:31504873-31505170:-|nuORF;ENST00000567673.5_1_16:31504873-31508265:-|nuORF 10.183394434864962 0.7604730176254005 3 T{I|L}H{I|L}V{I|L}[R{I|L}] 8 5 34.87 0.0 0.0 3.3256 0.0 0.0 84.91887500463379 0.0 84.91887500463379 0.0 -2.3978685854810777 -2.3978685854810777 0.0 0 0.0 0.0 0.0 0.0 T{I|L}H{I|L}V{I|L}[R{I|L}] 3.3256 - 324 + 1 1.422 146611.0 1.0 13389 5799 19176 HBL1_DMSO_200M_050219_1,19190 HBL1_DMSO_200M_050219_1,19190,LHIYANYR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19191 92.169 209.0 227970.0 25 0 25303.0 -1 NLLNCLIVRIL 11 87 670.910313018705 1339.80607310421 2 671.4112426638603 MULTI CID FTMS 0 0 0 19176 313280.78125 0.3711700103364986 1 -0.08197021484375 15 Carbamidomethyl (C) _NLLNC(Carbamidomethyl (C))LIVRIL_ ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7 8.745405648335112 0.8338865417133445 3 {[DA]|[EG]}{I|L}{I|L}{I|L}AV[MN]G{I|L}{I|L} 12 -1 29.135 0.0 0.0 2.1746 0.0 0.0 0.0 113.09718573532236 113.09718573532236 1.254471812167779 0.0 0.0 0.0 0 0.0 1.0 0.3807196863200844 0.0 {[DA]|[EG]}{I|L}{I|L}{I|L}AV[MN]G{I|L}{I|L} 2.1746 - 831 1 1.422 41278.2 1.0 13390 5799 19176 HBL1_DMSO_200M_050219_1,19191 HBL1_DMSO_200M_050219_1,19191,NLLNCLIVRIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19192 92.178 512.0 296000.0 25 0 23934.0 + 2468 AQYDNLWRL 9 162 589.801155723165 1177.58775851313 2 589.8009521365166 MULTI CID FTMS 0 0 0 19176 282234.0 0.7759164292693438 -1 0.1326217651367187 16 Unmodified _AQYDNLWRL_ ENSG00000100335|ENST00000325301|MIEF1 60.07390631473393 0.0260411565414776 3 [QA]YDN{I|L}WR{I|L} 9 0 [QA] + + 71.433 18.015 9.0485 6.066 6.066 59.232 0.0 0.0 0.0 0.0 38.367989884173866 0.0 0.0 0 1.274227503252014 0.0 0.0 1.5994850021680094 + + [QA]YDN{I|L}WR{I|L} 6.066 + + 4291 + 1 1.422 115493.5 1.0 13391 5799 19176 HBL1_DMSO_200M_050219_1,19192 HBL1_DMSO_200M_050219_1,19192,AQYDNLWRL True True AQYDNLWRL 92.178056 589.800952136517 3079667.5 19176.0 ENSG00000100335|ENST00000325301|MIEF1 7.309098084767659 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19193 92.19 692.0 458990.0 25 0 127960.0 + 27641 PLGSPLLL 8 168 405.2603300278034 808.5061071224068 2 405.2601501345634 MULTI CID FTMS 0 0 0 19176 263647.65625 0.5617898033258747 3 -0.2786407470703125 17 Unmodified _PLGSPLLL_ ENST00000537708.1_1_12:6669555-6669804:-|nuORF 70.86452775946826 0.1107857762478427 3 [{I|L}P][SG]P{I|L}{I|L}{I|L} 8 0 + 64.095 0.0 0.0 7.9276 7.9276 91.177 0.0 0.0 0.0 12.95294275538552 12.5190243216651 12.5190243216651 7.653631197717985 0 0.805462187404089 2.0 1.4436726795685342 0.0 + + [{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L};[{I|L}P][PG]S{I|L}{I|L}{I|L};[PG]PS{I|L}{I|L}{I|L}{I|L};[PG]SP{I|L}{I|L}{I|L}{I|L};{[HG]|PP}GS{I|L}{I|L}{I|L}{I|L};[PG]S{I|L}P{I|L}{I|L}{I|L};[{I|L}P][SG]{I|L}{I|L}P{I|L};[PG]S{I|L}{I|L}P{I|L}{I|L};[PG]P{I|L}S{I|L}{I|L}{I|L} 7.9276;6.981;6.5329;6.3255;6.2766;6.036;5.9342;5.1747;4.9876;4.5885 +;-;-;-;-;-;-;-;-;- + 337 1 1.422 246812.7 1.0 13392 5799 19176 HBL1_DMSO_200M_050219_1,19193 HBL1_DMSO_200M_050219_1,19193,PLGSPLLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19194 92.199 509.0 267520.0 25 0 45851.0 + + 35889 SVFAGKQGFITL 12 165 634.3570987526316 1266.699644572063 2 634.3582641482353 MULTI CID FTMS 0 0 0 19176 263701.28125 0.7232718601523489 2 -0.1608657836914062 18 Unmodified _SVLSPFFTRTL_ ENSG00000112159|ENST00000369393|MDN1 15.248480904072842 0.7179608125786238 3 [VS]{M(Oxidation (M))|F}AA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}WT{I|L} 11 -1 + 36.977 0.0 0.0 2.9192 2.9192 68.653 0.0 0.0 0.0 18.03689354675856 4.908588882108056 4.908588882108056 1.1798669615398083 0 1.5049158166844077 2.0 0.0 0.0 [VS]{M(Oxidation (M))|F}AA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}WT{I|L};[VS]{M(Oxidation (M))|F}[YR][VP]WT{I|L};[VS]VV{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{I|L}WT{I|L};[{I|L}T][YV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}WT{I|L};{[VA]|[{I|L}G]}YAA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}WT{I|L};{[VA]|[{I|L}G]}Y[YR][VP]WT{I|L};[{I|L}T]{[VA]|[{I|L}G]}{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{I|L}WT{I|L};{[QN]|[E{I|L}]|[KN]}[YV][KC]{I|L}WT{I|L};[Q{I|L}]PH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}WT{I|L};{[VA]|[{I|L}G]}APH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}WT{I|L} 2.9192;2.826;1.988;1.4562;1.1966;1.1034;1.0838;1.0108;0.95454;0.88945 -;-;-;-;-;-;-;-;-;- 1377 1 1.422 107424.4 1.0 13393 5799 19176 HBL1_DMSO_200M_050219_1,19194 HBL1_DMSO_200M_050219_1,19194,SVLSPFFTRTL False False SVFAGKQGFITL 92.199054 634.358264148235 4467500.5 19176.0 ENSG00000112159|ENST00000369393|MDN1 0.4189998110135396 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19195 92.204 259.0 514060.0 25 0 139530.0 + 25671 NGIKVLLI 8 120 435.2945814683795 868.574610003559 2 435.2952148318291 MULTI CID FTMS 0 0 0 19176 228954.75 0.0776343659981755 -4 0.4759979248046875 19 Unmodified _NGIKVLLI_ ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 81.86404211737425 0.0837039284849515 3 [NG]{I|L}KV{I|L}{I|L}{I|L} 8 0 + 77.204 0.0 0.0 8.8886 8.8886 95.267 0.0 0.0 0.0 19.195925227640984 54.60654430542988 19.195925227640984 9.78347485907939 0 1.2302046884880935 1.0969100130080565 0.0 1.579689690656103 + + [NG]{I|L}KV{I|L}{I|L}{I|L};[NG]{I|L}K{I|L}V{I|L}{I|L};[NG]{I|L}{I|L}KV{I|L}{I|L};{I|L}{I|L}VKGN{I|L}{I|L};{I|L}{I|L}VW{I|L}{I|L}{I|L};{I|L}{I|L}WV{I|L}{I|L}{I|L};[{I|L}V]K{I|L}GN{I|L}{I|L};[{I|L}V]KGN{I|L}{I|L}{I|L};{I|L}{I|L}VKGGG{I|L}{I|L};[KQ][VG]V{I|L}{I|L}{I|L} 8.8886;7.7622;6.7923;5.9794;5.4455;5.334;5.2172;5.1974;4.913;4.5624 +;-;-;-;-;-;-;-;-;- + 579 1 1.422 106148.1 1.0 13394 5799 19176 HBL1_DMSO_200M_050219_1,19195 HBL1_DMSO_200M_050219_1,19195,NGIKVLLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19196 92.215 550.0 238810.0 25 0 16137.0 25395 NDNYCKHSTI 10 165 597.7629282005522 1193.5113034679043 2 598.2654296755791 MULTI CID FTMS 0 0 0 19176 235455.5625 1.0 0 0.0 20 Unmodified _NDNYCKHSTI_ ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-2|DICER1;nc|ENSG00000100697|Q9UPY3-3|DICER1 18.1463463914782 0.5430639438673815 3 {[QN]|[E{I|L}]|[KN]}GGGV{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}T{I|L} 11 8 39.321 0.0 0.0 3.2945 0.0 0.0 0.0 112.96385432714727 112.96385432714727 16.13299932856198 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}GGGV{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}T{I|L} 3.2945 - 3404 1 1.422 101036.5 1.0 13395 5799 19176 HBL1_DMSO_200M_050219_1,19196 HBL1_DMSO_200M_050219_1,19196,NDNYCKHSTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19198 92.219 1.7 15512000.0 25 0 2186700.0 + 25786 NKIAVVQDELI 11 58 621.3578322744459 1240.7011116156916 2 621.3596069216728 MULTI CID FTMS 0 0 0 19197 28289048.0 0.2493947147911047 2 -0.1966705322265625 1 Unmodified _NKIAVVQDELI_ REV__ENSG00000091128|ENST00000388781|LAMB4 16.149105407346934 0.6992268271266642 3 {[DA]|[EG]}{I|L}D{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L} 11 -1 + 36.47 0.0 0.0 2.9395 2.9395 74.548 0.0 0.0 0.0 9.890046156985374 1.2930354201075005 1.2930354201075005 5.000000000000004 0 0.5 1.3979400086720375 0.0 0.0 {[DA]|[EG]}{I|L}D{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}AD{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}A{I|L}VD{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}ED{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}E{I|L}{I|L}D{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}VVVD{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}[KQ]VD{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}[K{I|L}]ND{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L} 2.9395;2.5365;2.1424;1.9896;1.9277;1.7394;1.5248;1.4967;1.2821;1.1402 -;-;-;-;-;-;-;-;-;- 223 1 1.422 28827.4 1.0 13396 5800 19197 HBL1_DMSO_200M_050219_1,19198 HBL1_DMSO_200M_050219_1,19198,NKIAVVQDELI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19199 92.22 3.2 14799000.0 25 0 2404700.0 + 3915 DALGKLISI 9 66 465.2871294596233 928.5597059860468 2 465.2872497439384 MULTI CID FTMS 0 0 0 19197 18566142.0 0.5711474253556386 1 -0.0788955688476562 2 Unmodified _DALGKLISI_ ENSG00000089154|ENST00000300648|GCN1 41.8396318013385 0.0653578398400075 3 {[DA]|[EG]}{I|L} 3 6 28.301 0.0 0.0 3.0478 0.0 0.0 0.0 626.3867988417685 626.3867988417685 8.915280875683745 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[DA]|[EG]}{I|L} 3.0478 + + 137 1 1.422 43853.6 1.0 13397 5800 19197 HBL1_DMSO_200M_050219_1,19199 HBL1_DMSO_200M_050219_1,19199,DALGKLISI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19200 92.221 5.8 9030100.0 25 0 1718100.0 + 36158 SVVESVFKL 9 64 504.2923429517529 1006.5701329703058 2 504.2925292849541 MULTI CID FTMS 0 0 0 19197 9625836.0 0.8525557401246084 1 -0.0788955688476562 3 Unmodified _SVVESVFKL_ ENSG00000242372|ENST00000374450|EIF6;nc|ENSG00000242372|P56537-2|EIF6 38.17557092003332 0.0854718145212029 3 [VS]VE[VS]{M(Oxidation (M))|F}K{I|L} 9 0 + 59.455 0.0 0.0 5.9067 5.9067 91.84 0.0 0.0 0.0 26.43440430594272 10.968878562567532 10.968878562567532 59.454873154752086 0 1.0994850021680094 2.0 0.0 0.0 + + [VS]VE[VS]{M(Oxidation (M))|F}K{I|L} 5.9067 + + 94 + 1 1.422 45292.1 1.0 13398 5800 19197 HBL1_DMSO_200M_050219_1,19200 HBL1_DMSO_200M_050219_1,19200,SVVESVFKL True True SVVESVFKL 92.221243 504.292529284954 167552864.0 19197.0 nc|ENSG00000242372|P56537-2|EIF6;;ENSG00000242372|ENST00000374450|EIF6 6.7307125727335615 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19201 92.222 14.0 3366800.0 25 0 326630.0 + 16876 KIFEMLEGV 9 81 533.2868228323229 1064.5590927314456 2 533.2866699099541 MULTI CID FTMS 0 0 0 19197 3870291.25 0.7074048657750015 -1 0.08197021484375 4 Unmodified _KIFEMLEGV_ chrX:135779641-135781561|13|36.23|0.53|6.09|-|ENST00000617203|CT45A5,CT45A5;chrX:135781735-135785220|13|147.77|0.31|8.87|-|ENST00000487941|CT45A5,CT45A5;chrX:135881315-135882536|15|139.0|1.0|7.12|-|ENST00000617981|CT45A10,CT45A10;chrX:135885350-135888848|10|46.0|0.05|9.87|-|ENST00000611668|CT45A10,CT45A10;ENSG00000228836|ENST00000698999|CT45A5;ENSG00000268940|ENST00000594565|CT45A1;ENSG00000269096|ENST00000598716|CT45A3;ENSG00000269586|ENST00000682849|CT45A10;ENSG00000270946|ENST00000620704|CT45A9;ENSG00000271449|ENST00000612907|CT45A2;ENSG00000273696|ENST00000610598|CT45A7;ENSG00000278085|ENST00000611660|CT45A8;ENSG00000278289|ENST00000620654|CT45A6 29.081581746732265 0.1611639662936252 3 [{M(Oxidation (M))|F}E]P{M(Oxidation (M))|F}K{I|L}ER 8 6 + 38.862 0.0 0.0 3.6505 3.6505 82.766 0.0 0.0 0.0 1.593793813122062 16.64320017660792 1.593793813122062 16.591860395210617 0 1.1237125054200234 0.0 0.0 0.0 [{M(Oxidation (M))|F}E]P{M(Oxidation (M))|F}K{I|L}ER;[VG]E[{I|L}T][YV]ER;[R{M(Oxidation (M))|F}]{I|L}M{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L};[R{M(Oxidation (M))|F}][YV][VP]EGV 3.6505;2.0919;1.6936;1.4206 -;-;-;- 231 1 1.422 44022.4 1.0 13399 5800 19197 HBL1_DMSO_200M_050219_1,19201 HBL1_DMSO_200M_050219_1,19201,KIFEMLEGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19202 92.224 31.0 654240.0 25 0 96298.0 + 26525 NVIDNLIVA 9 38 485.78227411203727 969.5499952908746 2 485.7820617556572 MULTI CID FTMS 0 0 0 19197 1542635.0 0.012794866629522 20 -2.11541748046875 5 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 10.073929032068715 0.563993802247229 3 {I|L} 1 8 11.99 0.0 0.0 1.2366 0.0 0.0 838.4552057174355 0.0 838.4552057174355 0.0 -9.058415520056544 -9.058415520056544 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2366 + + 13 + 1 1.422 22046.8 1.0 13400 5800 19197 HBL1_DMSO_200M_050219_1,19202 HBL1_DMSO_200M_050219_1,19202,NVIDNLIVA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19203 92.225 49.0 851270.0 25 0 72997.0 + 10157 FPYAFKEVI 9 82 557.3024624752268 1112.5903720172537 2 557.3027831912041 MULTI CID FTMS 0 0 0 19197 1051600.125 0.4813728393784541 3 -0.3572235107421875 6 Unmodified _FPYAFKEVI_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 25.399314129420983 0.2080152500878129 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F} 4 6 34.425 0.0 0.0 3.0941 0.0 0.0 0.0 631.3450771776628 631.3450771776628 15.428418131619992 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F} 3.0941 - 264 1 1.422 41317.5 1.0 13401 5800 19197 HBL1_DMSO_200M_050219_1,19203 HBL1_DMSO_200M_050219_1,19203,FPYAFKEVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19204 92.226 53.0 1535200.0 25 0 380660.0 + 4378 DAVKFFVAV 9 81 498.2817949042915 994.549036875383 2 498.2820312380791 MULTI CID FTMS 0 0 0 19197 1000195.5625 0.6062884444316475 1 -0.0788955688476562 7 Unmodified _DAVKFFVAV_ ENSG00000008294|ENST00000262013|SPAG9;nc|ENSG00000008294|O60271-2|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-9|SPAG9 25.399314129420983 0.2080152500878129 3 HAD[R{I|L}] 5 8 19.208 0.0 0.0 1.9313 0.0 0.0 384.24880556223786 0.0 384.24880556223786 0.0 0.7918124604762475 0.0 0.0 0 0.0 0.0 0.0 0.0 HAD[R{I|L}] 1.9313 - 177 1 1.422 66436.6 1.0 13402 5800 19197 HBL1_DMSO_200M_050219_1,19204 HBL1_DMSO_200M_050219_1,19204,DAVKFFVAV False True DAVKFFVAV 92.226278 498.282031238079 11480494.0 19197.0 nc|ENSG00000008294|O60271-9|SPAG9;;nc|ENSG00000008294|O60271-4|SPAG9;;nc|ENSG00000008294|O60271-2|SPAG9;;ENSG00000008294|ENST00000262013|SPAG9 4.543395519256592 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19205 92.227 25.0 1588900.0 25 0 149660.0 + 10684 FVVDEVHLI 9 76 535.7981351281533 0 535.7982055544853 PEAK CID FTMS 0 0 0 19197 819782.875 0.5142495840610664 1 -0.0788955688476562 8 Unmodified _FVVDEVHLI_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000480242.1_1_2:96950056-96950410:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 18.13498045792455 0.2189554373504223 3 V 1 8 8.8515 0.0 0.0 0.82757 0.0 0.0 246.13574671939392 721.3558443658811 967.4915910852752 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + V 0.82757 + + 45 + 1 1.422 42759.5 1.0 13403 5800 19197 HBL1_DMSO_200M_050219_1,19205 HBL1_DMSO_200M_050219_1,19205,FVVDEVHLI False True FVVDEVHLI 92.227458 535.798205554485 13816640.0 19197.0 ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENST00000480242.1_1_2:96950056-96950410:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 4.25441312789917 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19206 92.233 293.0 832140.0 25 0 69594.0 + 34809 SQFEPLDMKL 10 154 604.3052658374779 1206.5959787417555 2 604.8071777224541 MULTI CID FTMS 0 0 0 19197 756800.1875 0.7960256970137145 -1 0.08197021484375 9 Unmodified _SQFEPLDMKL_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7 59.17704102725264 0.0387449460849098 3 {[QS]|[NT]}{M(Oxidation (M))|F}EP{I|L}DMK{I|L} 10 0 + 70.135 0.0 0.0 5.8126 5.8126 89.703 0.0 0.0 0.0 28.49486240402272 12.64136888583522 12.64136888583522 17.379778706176964 0 1.2302046884880935 0.958607314841775 0.9876954943324544 0.5796896906561032 + + {[QS]|[NT]}{M(Oxidation (M))|F}EP{I|L}DMK{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}EP{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}T{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}EP{I|L}{[WT]|[RM]}S{I|L};[DV][YN]P{I|L}DMK{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}EP{I|L}{[WT]|[RM]}TV;{[QS]|[NT]}{M(Oxidation (M))|F}EPKKS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]DMK{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[MT];{[QS]|[NT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}K[HA]MV;[{I|L}P]DMK{I|L}G{[DS]|[MA]|[CV]|TT}[MT];{[QS]|[NT]}{M(Oxidation (M))|F}EP{I|L}[YQ]PV 5.8126;4.3722;3.7483;3.1708;3.0311;2.9135;2.7158;2.698;2.6815;2.666 +;-;-;-;-;-;-;-;-;- + 2680 + 1 1.422 176205.5 1.0 13404 5800 19197 HBL1_DMSO_200M_050219_1,19206 HBL1_DMSO_200M_050219_1,19206,SQFEPLDMKL True True SQFEPLDMKL 92.232841 604.807177722454 11563760.0 19197.0 nc|ENSG00000166508|P33993-3|MCM7;;ENSG00000166508|ENST00000303887|MCM7 7.313247203826904 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19207 92.234 49.0 677390.0 25 0 100620.0 + 20407 LLHFPFFL 8 62 517.2989911011326 1032.5834292690652 2 517.2995483279228 MULTI CID FTMS 0 0 0 19197 705963.125 1.0 0 0.0 10 Unmodified _LLHFPFFL_ REV__ENST00000357606.7_1_12:56221676-56222300:-|nuORF 17.086550045450526 0.6584923310065985 3 {I|L}{I|L}{I|L}D 4 -1 37.435 0.0 0.0 3.6254 0.0 0.0 0.0 575.2816866510374 575.2816866510374 24.670802793795268 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}{I|L}D 3.6254 - 22 + 1 1.422 34054.7 1.0 13405 5800 19197 HBL1_DMSO_200M_050219_1,19207 HBL1_DMSO_200M_050219_1,19207,LLHFPFFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19208 92.236 52.0 919540.0 25 0 154310.0 + 9078 FFFFGSMKI 9 67 562.2835238849506 1122.552494836701 2 562.2840453982353 MULTI CID FTMS 0 0 0 19197 619004.875 0.5570270512567711 1 -0.0788955688476562 11 Unmodified _FFFFGSMKI_ REV__ENST00000467008.5_1_6:16739210-16739459:-|nuORF 17.11289562659939 0.3734572693229295 3 T{M(Oxidation (M))|F}{M(Oxidation (M))|F}E 4 -1 39.993 0.0 0.0 3.5627 0.0 0.0 580.2985096662125 0.0 580.2985096662125 0.0 28.003122090841828 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 T{M(Oxidation (M))|F}{M(Oxidation (M))|F}E 3.5627 - 43 1 1.422 44844.6 1.0 13406 5800 19197 HBL1_DMSO_200M_050219_1,19208 HBL1_DMSO_200M_050219_1,19208,FFFFGSMKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19209 92.238 109.0 539200.0 25 0 213880.0 39503 VASKYTKVEQL 11 55 633.356883148609 0 633.3569824099541 PEAK CID FTMS 0 0 0 19197 532873.875 1.0 0 0.0 12 Unmodified _VASKYTKVEQL_ ENSG00000183111|ENST00000333677|ARHGEF37 5.296884461304476 0.47618401536486 3 E 1 10 1.5938 0.0 0.0 0.12602 0.0 0.0 1007.560554772024 125.07253442935782 1132.633089201382 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.12602 + + 6 + 1 1.422 49936.6 1.0 13407 5800 19197 HBL1_DMSO_200M_050219_1,19209 HBL1_DMSO_200M_050219_1,19209,VASKYTKVEQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19210 92.241 163.0 228170.0 25 0 11192.0 + -1 EGIRACKWFI 10 68 427.2235442155148 1278.6488032467446 3 427.2233459353447 MULTI CID FTMS 0 0 0 19197 479537.28125 1.0 0 0.0 13 Carbamidomethyl (C) _EGIRAC(Carbamidomethyl (C))KWFI_ REV__ENSG00000174695|ENST00000502346|TMEM167A 8.97624648632007 0.6851160995914376 3 {[DA]|[EG]}{I|L}D 4 -1 39.253 0.0 0.0 3.0698 0.0 0.0 0.0 861.453546859448 861.453546859448 24.648415687162952 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {[DA]|[EG]}{I|L}D 3.0698 - 33 + 1 1.422 41226.7 1.0 13408 5800 19197 HBL1_DMSO_200M_050219_1,19210 HBL1_DMSO_200M_050219_1,19210,EGIRACKWFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19211 92.243 103.0 384790.0 25 0 89201.0 + -1 RRRRRQLRQQR 11 62 551.0044107413759 1649.9914028243277 3 551.0048705935478 MULTI CID FTMS 0 0 0 19197 479856.6875 0.5115459691697508 -1 0.08197021484375 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RRRRRQLRQQR_ REV__ENST00000394166.7_1_15:96874192-96874351:+|nuORF 0.0 0.8751479354844584 3 {I|L} 1 -1 11.42 0.0 0.0 0.69212 0.0 0.0 1518.8962317811618 0.0 1518.8962317811618 0.0 0.310739533744222 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.69212 + + 13 + 1 1.422 39170.1 1.0 13409 5800 19197 HBL1_DMSO_200M_050219_1,19211 HBL1_DMSO_200M_050219_1,19211,RRRRRQLRQQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19212 92.251 444.0 141730.0 25 0 8100.9 -1 LTCTWRSRSI 10 118 640.3317702743777 1278.6489876155554 2 640.3322631716728 MULTI CID FTMS 0 0 0 19197 324183.46875 1.0 0 0.0 15 Carbamidomethyl (C) _LTC(Carbamidomethyl (C))TWRSRSI_ ENST00000421834.6_3_6:56600045-56707924:-|nuORF 22.736283301280096 0.4578556481593033 3 DA{I|L}DV 5 -1 45.788 0.0 0.0 3.581 0.0 0.0 0.0 762.4069307916624 762.4069307916624 23.910142306784195 0.0 0.0 0.0 0 0.5891368308784531 0.7958800173440752 0.0 0.0 DA{I|L}DV 3.581 - 527 + 1 1.422 53339.9 1.0 13410 5800 19197 HBL1_DMSO_200M_050219_1,19212 HBL1_DMSO_200M_050219_1,19212,LTCTWRSRSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19213 92.262 617.0 277410.0 25 0 23519.0 + 15312 IPLGGVYL 8 163 416.2511883373696 830.4878237415393 2 416.2513000369072 MULTI CID FTMS 0 0 0 19197 284826.03125 1.0 0 0.0 16 Unmodified _IPLGGVYL_ REV__ENSG00000196569|ENST00000421865|LAMA2 24.20995872069341 0.5349487244130675 3 {I|L}P{I|L} 3 -1 46.242 0.0 0.0 5.5681 0.0 0.0 0.0 504.24424158267817 504.24424158267817 32.26280941356464 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {I|L}P{I|L} 5.5681 + + 93 + 1 1.422 130312.5 1.0 13411 5800 19197 HBL1_DMSO_200M_050219_1,19213 HBL1_DMSO_200M_050219_1,19213,IPLGGVYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19214 92.27 460.0 371450.0 25 0 25633.0 -1 0 124 835.4011412460931 2503.181594338479 3 835.7349120974541 MULTI CID FTMS 0 0 0 19197 261141.9375 0.56868083857698 -1 0.08197021484375 17 3 {[TV]|[{I|L}S]}AADTA[QP]{I|L}{I|L}N 12 -1 58.533 0.0 0.0 2.3384 0.0 0.0 0.0 1305.517668946999 1305.517668946999 29.92738247542264 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 1.4361818737241734 0.2614393726401688 {[TV]|[{I|L}S]}AADTA[QP]{I|L}{I|L}N 2.3384 - 11186 1 1.422 122829.2 1.0 13412 5800 19197 HBL1_DMSO_200M_050219_1,19214 HBL1_DMSO_200M_050219_1,19214, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19215 92.278 472.0 539120.0 25 0 49344.0 11433 GHAGHTSL 8 117 779.3826058357268 778.3753293691268 1 779.3822509646416 MULTI CID FTMS 0 0 0 19197 251782.765625 0.6156893310094647 -1 0.08197021484375 18 Unmodified _GHAGHTSL_ ENSG00000109606|ENST00000336812|DHX15 9.347437153973935 0.7675937258251505 3 EE{M(Oxidation (M))|F}E{I|L}{I|L} 6 7 + 69.236 0.0 0.0 8.8949 8.8949 95.608 0.0 0.0 0.0 10.94212497064703 16.197887582883936 10.94212497064703 10.94212497064703 0 1.2346368802282015 1.0457574905606752 1.579689690656103 0.0 EE{M(Oxidation (M))|F}E{I|L}{I|L};[{M(Oxidation (M))|F}E]EE{I|L}{I|L};EE{M(Oxidation (M))|F}{I|L}E{I|L};EE{I|L}E{M(Oxidation (M))|F}{I|L};EE{I|L}{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}EE{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}EE{I|L};[{M(Oxidation (M))|F}E]E{I|L}E{I|L};[{M(Oxidation (M))|F}E]{I|L}EE{I|L} 8.8949;7.4891;7.1267;6.5155;6.446;5.9314;5.8619;5.8308;5.721;5.0091 -;-;-;-;-;-;-;-;-;- 364 1 1.422 177722.3 1.0 13413 5800 19197 HBL1_DMSO_200M_050219_1,19215 HBL1_DMSO_200M_050219_1,19215,GHAGHTSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19216 92.28 71.0 443660.0 25 0 67872.0 -1 ILACQQMTV 9 64 540.2665068960231 1078.518460858846 2 540.2668334841728 MULTI CID FTMS 0 0 0 19197 200661.875 0.0852945164588696 4 -0.4092559814453125 19 Carbamidomethyl (C),Oxidation (M) _ILAC(Carbamidomethyl (C))QQM(Oxidation (M))TV_ ENSG00000070214|ENST00000374720|SLC44A1;nc|ENSG00000070214|Q8WWI5-2|SLC44A1;nc|ENSG00000070214|Q8WWI5-3|SLC44A1 19.438996006549623 0.310492472477042 3 [{I|L}A]E{I|L} 4 -1 23.645 0.0 0.0 2.1924 0.0 0.0 0.0 649.246463138396 649.246463138396 0.0 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}A]E{I|L} 2.1924 - 48 1 1.422 33084.3 1.0 13414 5800 19197 HBL1_DMSO_200M_050219_1,19216 HBL1_DMSO_200M_050219_1,19216,ILACQQMTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19217 92.294 710.0 178580.0 25 0 22193.0 18702 LAIWEASL 8 156 451.75254133747273 901.4905297417456 2 451.7532226443291 MULTI CID FTMS 0 0 0 19197 208657.09375 0.0089430583246734 69 -7.561073303222656 20 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 42.96799951952854 0.1846367511955703 3 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 7 3 49.429 0.0 0.0 5.4831 0.0 0.0 0.0 199.10913653560445 199.10913653560445 31.4840322369416 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L} 5.4831 - 595 1 1.422 100815.1 1.0 13415 5800 19197 HBL1_DMSO_200M_050219_1,19217 HBL1_DMSO_200M_050219_1,19217,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19219 92.298 4.6 9629300.0 25 0 1551600.0 + 35828 SVLDDNKLLTL 11 73 615.8511100545097 1229.6876671758191 2 615.8513061404228 MULTI CID FTMS 0 0 0 19218 12097886.0 1.0 0 0.0 1 Unmodified _SVLDDNKLLTL_ ENSG00000197102|ENST00000360184|DYNC1H1 46.0223103267499 0.1396584557920269 3 [VS]{I|L}[NG]D{I|L}W{I|L} 9 5 73.963 0.0 0.0 6.0147 0.0 0.0 0.0 229.11754488642228 229.11754488642228 51.901056208558025 0.0 0.0 0.0 0 1.424742501084005 2.0 1.1549471895720984 0.3807196863200844 [VS]{I|L}[NG]D{I|L}W{I|L} 6.0147 - 894 1 1.409 38067.9 1.0 13416 5801 19218 HBL1_DMSO_200M_050219_1,19219 HBL1_DMSO_200M_050219_1,19219,SVLDDNKLLTL False True SVLDDNKLLTL 92.297778 615.851306140423 338231376.0 19218.0 ENSG00000197102|ENST00000360184|DYNC1H1 5.967067400614421 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19220 92.299 14.0 2921600.0 25 0 270470.0 + 34081 SLLGDDALVQV 11 77 565.3082011185419 1128.6018493038837 2 565.3090698122978 MULTI CID FTMS 0 0 0 19218 4197067.5 1.0 0 0.0 2 Unmodified _SLLGDDALVQV_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 41.8396318013385 0.1840573104808743 3 {NN|[MP]|[D{I|L}]|[EV]}AVWS{I|L} 7 8 50.979 0.0 0.0 4.517 0.0 0.0 0.0 341.1778407420142 341.1778407420142 35.54576644454535 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.9247425010840048 0.0 {NN|[MP]|[D{I|L}]|[EV]}AVWS{I|L} 4.517 - 430 1 1.409 39597.2 1.0 13417 5801 19218 HBL1_DMSO_200M_050219_1,19220 HBL1_DMSO_200M_050219_1,19220,SLLGDDALVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19221 92.3 20.0 3643600.0 25 0 422960.0 + 32101 RVLQNLLTI 9 86 535.340103053445 1068.66565317369 2 535.3401977419853 MULTI CID FTMS 0 0 0 19218 2447215.25 0.2089632169136875 -2 0.1608657836914062 3 Unmodified _RVLQNLLTI_ ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2 43.85829265575387 0.0542763391141878 3 QN{I|L}{I|L}T{I|L} 6 3 54.826 0.0 0.0 5.1303 0.0 0.0 368.25352675605626 0.0 368.25352675605626 0.0 31.180540824916392 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.4247425010840047 + QN{I|L}{I|L}T{I|L} 5.1303 + + 177 1 1.409 62469.5 1.0 13418 5801 19218 HBL1_DMSO_200M_050219_1,19221 HBL1_DMSO_200M_050219_1,19221,RVLQNLLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19222 92.302 88.0 526040.0 25 0 37085.0 -1 0 85 753.8759296179318 3011.474612605327 4 754.1270629763603 MULTI CID FTMS 0 0 0 19218 910503.4375 0.4585481353170186 3 -0.3303604125976562 4 3 A{I|L}SA{I|L}SD{I|L}HA[HK] 12 -1 57.12 0.0 0.0 1.8967 0.0 0.0 1749.7964642672391 0.0 1749.7964642672391 0.0 36.68706979814544 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 A{I|L}SA{I|L}SD{I|L}HA[HK] 1.8967 - 779 + 1 1.409 43729.3 1.0 13419 5801 19218 HBL1_DMSO_200M_050219_1,19222 HBL1_DMSO_200M_050219_1,19222, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19223 92.304 58.0 904770.0 25 0 133510.0 + 16978 KIVIDFDSI 9 90 525.2979427186651 1048.5813325041302 2 525.2977783083916 MULTI CID FTMS 0 0 0 19218 564114.875 0.0660907873207447 10 -1.1303253173828125 5 Unmodified _KIVIDFDSI_ ENSG00000129187|ENST00000438320|DCTD;nc|ENSG00000129187|P32321-2|DCTD 29.84058131909904 0.1515068451768857 3 [{I|L}V]K{I|L}D{M(Oxidation (M))|F}DS{I|L} 9 2 + 54.757 0.0 0.0 5.222 5.222 74.883 0.0 0.0 0.0 1.0534318054491862 14.973024840566469 1.0534318054491862 1.0534318054491862 0 0.5 0.7695510786217261 0.0 0.0 [{I|L}V]K{I|L}D{M(Oxidation (M))|F}DS{I|L};[K{I|L}]V{I|L}D{M(Oxidation (M))|F}DS{I|L};{NN|[MP]|[D{I|L}]|[EV]}V[K{I|L}]{M(Oxidation (M))|F}DS{I|L};[{I|L}V]D[K{I|L}]{M(Oxidation (M))|F}DS{I|L};[DV]{I|L}[K{I|L}]{M(Oxidation (M))|F}DS{I|L};{I|L}{I|L}[WR][WY]{I|L};{[{M(Oxidation (M))|F}D]|MM}D[{I|L}V][K{I|L}]S{I|L};{NN|[MP]|[D{I|L}]|[EV]}V[K{I|L}][WY]{I|L} 5.222;5.1215;3.6183;3.1467;3.108;1.3566;1.0797;1.0226 -;+;-;-;-;-;-;- + 327 1 1.409 44895.8 1.0 13420 5801 19218 HBL1_DMSO_200M_050219_1,19223 HBL1_DMSO_200M_050219_1,19223,KIVIDFDSI False True KIVIDFDSI 92.303553 525.297778308392 9937611.0 19218.0 nc|ENSG00000129187|P32321-2|DCTD;;ENSG00000129187|ENST00000438320|DCTD 4.439132690429688 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19224 92.307 153.0 591340.0 25 0 32900.0 -1 0 106 655.5757439414184 2618.273869899273 4 655.8282348513603 MULTI CID FTMS 0 0 0 19218 515998.3125 0.8360737217706471 -3 0.293487548828125 6 3 {[QN]|[E{I|L}]|[KN]}{I|L}C(Carbamidomethyl (C))VQ[{I|L}P]Q 9 -1 35.072 0.0 0.0 1.3395 0.0 0.0 0.0 1534.6770320952437 1534.6770320952437 8.76875828580377 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}C(Carbamidomethyl (C))VQ[{I|L}P]Q 1.3395 - 1663 1 1.409 75846.1 1.0 13421 5801 19218 HBL1_DMSO_200M_050219_1,19224 HBL1_DMSO_200M_050219_1,19224, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19225 92.31 159.0 978690.0 25 0 128740.0 + 3178 AVVLPLARI 9 118 476.3211978037891 950.6278426743784 2 476.3215515017509 MULTI CID FTMS 0 0 0 19218 484054.90625 0.1204152776843186 -3 0.293487548828125 7 Unmodified _AVVLPLARI_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 60.38955033654506 0.025866396858536 3 {[VA]|[{I|L}G]}V{I|L}{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 9 2 + 73.72 0.0 0.0 7.7549 7.7549 89.068 0.0 0.0 0.0 48.83803120088516 5.681277912325342 5.681277912325342 5.752574989159953 0 1.3807196863200843 1.6989700043360187 0.0 1.4049471895720984 {[VA]|[{I|L}G]}V{I|L}{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[VA]|[{I|L}G]}V{I|L}P{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[VA]|[{I|L}G]}{I|L}V{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[VA]|[{I|L}G]}{I|L}VP{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 7.7549;7.1498;6.9123;6.3071 -;+;-;- + 666 + 1 1.409 124543.9 1.0 13422 5801 19218 HBL1_DMSO_200M_050219_1,19225 HBL1_DMSO_200M_050219_1,19225,AVVLPLARI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19226 92.312 93.0 1093800.0 25 0 138340.0 + 44745 YPLERGFIYV 10 87 628.8374189013878 1255.6602848695754 2 628.8378784060478 MULTI CID FTMS 0 0 0 19218 451824.75 0.2104886850477015 -2 0.1608657836914062 8 Unmodified _YPLERGFIYV_ ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF 32.037481411007896 0.2488723560272515 3 [TP]S{I|L}V{I|L}{[DS]|[MA]|[CV]|TT}YYV 11 7 + 53.738 0.0 0.0 4.2796 4.2796 72.083 0.0 0.0 0.0 10.579919469776868 14.190166918179614 10.579919469776868 1.249387366082999 0 0.805462187404089 0.8538719643217619 0.4247425010840047 0.0 [TP]S{I|L}V{I|L}{[DS]|[MA]|[CV]|TT}YYV;[TP]{I|L}SV{I|L}{[DS]|[MA]|[CV]|TT}YYV;[TP]S{I|L}V{[DS]|[MA]|[CV]|TT}{I|L}YYV;[TP]{I|L}SV{[DS]|[MA]|[CV]|TT}{I|L}YYV;[TP]S{I|L}V{I|L}[HM]PYV;[TP]S{I|L}V{[DS]|[MA]|[CV]|TT}Y{I|L}YV;[TP]{I|L}SV{I|L}[HM]PYV;[TP]{I|L}SV{[DS]|[MA]|[CV]|TT}Y{I|L}YV;[{I|L}P]TSV{I|L}{[DS]|[MA]|[CV]|TT}YYV;[{I|L}P]TSV{[DS]|[MA]|[CV]|TT}{I|L}YYV 4.2796;4.1801;3.9414;3.8419;3.8002;3.7016;3.7007;3.6021;3.4371;3.0988 -;-;-;-;-;-;-;-;-;- 615 1 1.409 83068.9 1.0 13423 5801 19218 HBL1_DMSO_200M_050219_1,19226 HBL1_DMSO_200M_050219_1,19226,YPLERGFIYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19227 92.314 84.0 1002500.0 25 0 151390.0 + 1568 ALLDVFREA 9 91 517.2872885255881 1032.560024117976 2 517.2856323122978 MULTI CID FTMS 0 0 0 19218 343457.03125 0.0671684227164841 -3 0.293487548828125 9 Unmodified _ALLDVFREA_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 31.26834338654808 0.1333407332142048 3 [{I|L}A]{I|L}DV{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V 9 2 + 62.849 0.0 0.0 6.0867 6.0867 76.38 0.0 0.0 0.0 21.81814138253838 0.3218468337140123 0.3218468337140123 0.3218468337140123 0 1.1861818737241734 2.0 0.0 0.3252574989159953 [{I|L}A]{I|L}DV{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V;[{I|L}A]{I|L}DV{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[{I|L}A]EVV{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V;[{I|L}A]EVV{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 6.0867;6.0555;5.1349;5.1037 -;-;-;- 415 + 1 1.409 72620.5 1.0 13424 5801 19218 HBL1_DMSO_200M_050219_1,19227 HBL1_DMSO_200M_050219_1,19227,ALLDVFREA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19228 92.322 480.0 202360.0 25 0 72795.0 -1 0 101 817.489743157075 1632.96493338095 2 817.4896728396416 MULTI CID FTMS 0 0 0 19218 336496.3125 1.0 0 0.0 10 3 {M(Oxidation (M))|F} 1 -1 2.4743 0.0 0.0 0.15152 0.0 0.0 875.5466117030188 607.3440384598119 1482.8906501628308 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.15152 - 43 + 1 1.409 77009.7 1.0 13425 5801 19218 HBL1_DMSO_200M_050219_1,19228 HBL1_DMSO_200M_050219_1,19228, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19229 92.331 526.0 285770.0 25 0 31545.0 + 33300 DAPKAGQLEAWL 12 163 649.8410553115692 1297.6675576899383 2 649.8412353396416 MULTI CID FTMS 0 0 0 19218 285749.75 1.0 0 0.0 11 Unmodified _SFRYLKDEQL_ nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4 20.41453444215458 0.5050059513928961 3 {[DA]|[EG]}[PG]P{I|L}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A 10 9 43.328 0.0 0.0 3.3389 0.0 0.0 0.0 314.1485152110195 314.1485152110195 -0.8995797255373645 0.0 -0.8995797255373645 0.0 0 1.3494850021680094 1.5228787452803376 1.0501648626366045 0.0 {[DA]|[EG]}[PG]P{I|L}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A 3.3389 - 4227 1 1.409 114655.3 1.0 13426 5801 19218 HBL1_DMSO_200M_050219_1,19229 HBL1_DMSO_200M_050219_1,19229,SFRYLKDEQL False False DAPKAGQLEAWL 92.331457 649.841235339642 2892218.25 19218.0 nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4 3.295426289240519 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19230 92.337 285.0 491990.0 25 0 35006.0 + 16358 IYPEVVHMF 9 156 567.786142174349 1133.557731415498 2 567.7863647341728 MULTI CID FTMS 0 0 0 19218 279018.625 0.6420783194089017 2 -0.2783279418945312 12 Unmodified _IYPEVVHMF_ ENSG00000078304|ENST00000694906|PPP2R5C;ENST00000553730.5_1_14:102276279-102348623:+|nuORF;nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C 49.66892048692302 0.0410958345688192 3 [Y{I|L}]PEVVHM{M(Oxidation (M))|F} 9 0 + 61.118 0.0 0.0 5.3917 5.3917 75.269 0.0 0.0 0.0 27.147642715192504 0.9310170188703992 0.9310170188703992 0.9310170188703992 0 0.3494850021680094 2.0 0.5796896906561032 0.0 + + [Y{I|L}]PEVVHM{M(Oxidation (M))|F};[Y{I|L}]PEVV[DN]SV;[Y{I|L}]PEVV{[CT]|[{M(Oxidation (M))|F}G]}[NP];[Y{I|L}]P{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VYSV;[Y{I|L}]PEV[R{M(Oxidation (M))|F}][NP];[Y{I|L}]PE{[QS]|[NT]}{[RE]|[WV]}{I|L};[Y{I|L}]PEV{[CT]|[{M(Oxidation (M))|F}G]}[NP]V;[Y{I|L}]PE[R{M(Oxidation (M))|F}][NP]V;[Y{I|L}]PEV{[CT]|[{M(Oxidation (M))|F}G]}V[NP];[Y{I|L}]PE[R{M(Oxidation (M))|F}]V[NP] 5.3917;5.3096;3.9835;3.7813;3.4073;3.2519;3.2202;3.175;3.0648;3.0197 +;-;-;-;-;-;-;-;-;- + 2335 + 1 1.409 112078.0 1.0 13427 5801 19218 HBL1_DMSO_200M_050219_1,19230 HBL1_DMSO_200M_050219_1,19230,IYPEVVHMF True True IYPEVVHMF 92.336707 567.786364734173 7821714.5 19218.0 ENSG00000078304|ENST00000694906|PPP2R5C;;nc|ENSG00000078304|Q13362|PPP2R5C;;nc|ENSG00000078304|Q13362-3|PPP2R5C;;nc|ENSG00000078304|Q13362-4|PPP2R5C;;nc|ENSG00000078304|Q13362-5|PPP2R5C;;nc|ENSG00000078304|Q13362-2|PPP2R5C;;ENST00000553730.5_1_14:102276279-102348623:+|nuORF 5.754113674163818 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19231 92.34 197.0 591150.0 25 0 97700.0 + 17204 KLLEEQGIFL 10 130 595.3450803702775 1188.675607807355 2 595.3456909060478 MULTI CID FTMS 0 0 0 19218 251349.5 0.1865438599274362 -2 0.1608657836914062 13 Unmodified _KLLEEQGIFL_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 67.83816525789305 0.0190062514522628 3 {I|L}{I|L}KEEQG{I|L}{M(Oxidation (M))|F}{I|L} 10 2 + 77.418 0.0 0.0 6.513 6.513 86.122 0.0 0.0 0.0 6.161029739507782 16.532125137753447 6.161029739507782 6.161029739507782 0 0.8807196863200843 0.9208187539523752 1.4049471895720984 1.079689690656103 {I|L}{I|L}KEEQG{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]GEE{I|L}K{I|L}{M(Oxidation (M))|F}{I|L};[K{I|L}]{I|L}EEQG{I|L}{M(Oxidation (M))|F}{I|L};{I|L}{I|L}KEE[AG]G{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]EQG{I|L}{M(Oxidation (M))|F}{I|L};[K{I|L}]{I|L}EE[AG]G{I|L}{M(Oxidation (M))|F}{I|L};{[QG]|[NA]}{I|L}EE{I|L}K{I|L}{M(Oxidation (M))|F}{I|L};{[QG]|[NA]}E{I|L}E{I|L}K{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}E[K{I|L}]QG{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]E[AG]G{I|L}{M(Oxidation (M))|F}{I|L} 6.513;5.9947;5.8247;5.742;5.1552;5.0537;5.0053;4.709;4.572;4.3842 -;-;+;-;-;-;-;-;-;- + 1126 1 1.409 88110.4 1.0 13428 5801 19218 HBL1_DMSO_200M_050219_1,19231 HBL1_DMSO_200M_050219_1,19231,KLLEEQGIFL True True KLLEEQGIFL 92.34049 595.345690906048 24426034.0 19218.0 nc|ENSG00000127481|Q5T4S7-2|UBR4;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4 5.562210559844971 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19232 92.346 272.0 354360.0 25 0 42543.0 + 37331 TIYERFVLV 9 119 570.3268807358456 1138.6392085384912 2 570.3257324099541 MULTI CID FTMS 0 0 0 19218 228136.28125 1.0 0 0.0 14 Unmodified _TIYERFVLV_ ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 33.4449034751529 0.1114409586740657 3 [{I|L}T]YEC(Carbamidomethyl (C)) 5 5 38.869 0.0 0.0 3.4136 0.0 0.0 0.0 469.3433931940063 469.3433931940063 -0.1291065739524555 0.0 -0.1291065739524555 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}T]YEC(Carbamidomethyl (C)) 3.4136 - 397 + 1 1.409 76036.1 1.0 13429 5801 19218 HBL1_DMSO_200M_050219_1,19232 HBL1_DMSO_200M_050219_1,19232,TIYERFVLV True True TIYERFVLV 92.345513 570.325732409954 2281649.5 19218.0 nc|ENSG00000101343|Q9BZJ0|CRNKL1;;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;;ENSG00000101343|ENST00000536226|CRNKL1 6.812273820241292 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19233 92.356 590.0 198040.0 25 0 28885.0 + 37666 TLMKQYIEFV 10 151 636.3387414756329 0 636.3389770388603 PEAK CID FTMS 0 0 0 19218 217180.125 1.0 0 0.0 15 Unmodified _TLMKQYIEFV_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;nc|ENSG00000171848|P31350-2|RRM2 63.960520009940105 0.0183626197650861 3 E{I|L}TMK{I|L} 6 7 37.713 0.0 0.0 2.968 0.0 0.0 264.14558954786884 288.0998934381469 552.2454829860158 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.7302046884880937 E{I|L}TMK{I|L} 2.968 - 1738 + 1 1.409 97128.0 1.0 13430 5801 19218 HBL1_DMSO_200M_050219_1,19233 HBL1_DMSO_200M_050219_1,19233,TLMKQYIEFV True True TLMKQYIEFV 92.355851 636.33897703886 1192451.75 19218.0 ENSG00000171848|ENST00000304567|RRM2;;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;;nc|ENSG00000171848|P31350-2|RRM2 6.26224438349406 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19234 92.371 800.0 525740.0 25 0 51073.0 + 35434 STLHLVLRL 9 249 351.2258024463099 1050.6555779391297 3 351.2262451052666 MULTI CID FTMS 0 0 0 19218 204981.5 0.005091040489992 21 -2.243965148925781 16 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 68.08070601005525 0.0218408846571049 3 {[MG]|[TS]}{I|L}H{I|L}V{I|L}{I|L}R 9 2 + 55.106 0.0 0.0 5.2449 5.2449 75.954 0.0 0.0 0.0 7.147642715192504 1.7363066050802445 1.7363066050802445 1.7363066050802445 0 1.0044321917401078 -0.0 0.0 0.9916440611282626 {[MG]|[TS]}{I|L}H{I|L}V{I|L}{I|L}R;{[MG]|[TS]}{I|L}H{I|L}V{I|L}R{I|L};{[MG]|[TS]}{I|L}{I|L}HV{I|L}{I|L}R;{[MG]|[TS]}{I|L}H{I|L}{I|L}V{I|L}R;{[MG]|[TS]}{I|L}{I|L}HV{I|L}R{I|L};{[MG]|[TS]}{I|L}H{I|L}{I|L}VR{I|L};{[MG]|[TS]}{I|L}{I|L}H{I|L}V{I|L}R;{[MG]|[TS]}{I|L}{I|L}H{I|L}VR{I|L};{[MG]|[TS]}{I|L}H{I|L}V[{I|L}V]G{I|L};{[MG]|[TS]}{I|L}{I|L}HV[{I|L}V]G{I|L} 5.2449;5.0796;4.5541;4.5042;4.3888;4.339;3.8135;3.6482;2.1588;1.468 -;+;-;-;-;-;-;-;-;- + 339 + 1 1.409 330562.6 0.9300000071525574 13431 5801 19218 HBL1_DMSO_200M_050219_1,19234 HBL1_DMSO_200M_050219_1,19234,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19235 92.372 63.0 933730.0 25 0 84497.0 22240 LPRIFTSI 8 75 473.78907192202655 945.5635909108532 2 473.7890197634697 MULTI CID FTMS 0 0 0 19218 204063.8125 0.4262758392977839 -6 0.6368637084960938 17 Unmodified _LPRIFTSI_ ENSG00000167085|ENST00000300408|PHB1;ENST00000355202.8_1_19:38187835-38188303:-|nuORF;ENST00000393345.8_1_17:47486298-47490626:-|nuORF;nc|ENSG00000167085|P35232-2|PHB1 18.13498045792455 0.6430038125133779 3 [YV]{I|L} 3 7 25.062 0.0 0.0 2.6504 0.0 0.0 0.0 567.3249077970502 567.3249077970502 0.4474060134371882 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YV]{I|L} 2.6504 - 50 1 1.409 52697.8 1.0 13432 5801 19218 HBL1_DMSO_200M_050219_1,19235 HBL1_DMSO_200M_050219_1,19235,LPRIFTSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19236 92.383 625.0 124460.0 25 0 14458.0 + 8216 EPVRLFRRRRW 11 91 785.9635552331875 1569.912557533175 2 786.4661743044853 MULTI CID FTMS 0 0 0 19218 169990.78125 1.0 0 0.0 18 Unmodified _EPVRLFRRRRW_ REV__ENST00000571543.1_1_17:1131443-1132291:-|nuORF 1.1933415558491238 0.8695176722560516 3 [Q{I|L}]S 3 -1 14.922 0.0 0.0 0.95047 0.0 0.0 0.0 1238.7138935529597 1238.7138935529597 3.138788439798347 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [Q{I|L}]S 0.95047 - 125 1 1.409 57844.7 1.0 13433 5801 19218 HBL1_DMSO_200M_050219_1,19236 HBL1_DMSO_200M_050219_1,19236,EPVRLFRRRRW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19237 92.397 800.0 268620.0 25 0 21976.0 + 41445 VPLLVKVI 8 158 440.8151375438941 879.6157221545883 2 440.8150207400322 MULTI CID FTMS 0 0 0 19218 139982.703125 0.2349300005653701 -3 0.293487548828125 19 Unmodified _VPLLVKVI_ ENSG00000137040|ENST00000259569|RANBP6 74.39630413441286 0.1057069479668299 3 VP{I|L}{I|L}VKV{I|L} 8 0 + 82.31 0.0 0.0 9.3575 9.3575 92.939 0.0 0.0 0.0 28.62826806974688 7.7815125038364386 7.7815125038364386 7.7815125038364386 0 2.110924374808178 1.2218487496163564 0.0 0.2887254899964357 + + VP{I|L}{I|L}VKV{I|L};VP{I|L}{I|L}VK{I|L}V;VP{I|L}{I|L}V{I|L}KV 9.3575;8.4728;7.1959 +;-;- + 543 + 1 1.409 166546.6 0.9100000262260436 13434 5801 19218 HBL1_DMSO_200M_050219_1,19237 HBL1_DMSO_200M_050219_1,19237,VPLLVKVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19238 92.411 748.0 280890.0 25 0 19277.0 + 10229 HALPATVWSL 10 183 546.7638977484446 1091.5132425636891 2 547.8040649294853 MULTI CID FTMS 0 0 0 -1 0 20 Unmodified _FQMPTPIQM_ ENST00000485431.1_1_X:48771410-48771858:-|nuORF;ENSG00000102096|ENST00000376509|PIM2 14.838274106304384 0.4350285940865338 3 [Y{I|L}]Q[VS]VWR 8 9 30.071 0.0 0.0 2.755 0.0 0.0 0.0 56.91754925598585 56.91754925598585 14.945597385269377 0.0 0.0 0.0 0 0.0 2.0 0.805462187404089 0.0 [Y{I|L}]Q[VS]VWR 2.755 - 1596 1 1.409 163160.8 1.0 13435 5801 19218 HBL1_DMSO_200M_050219_1,19238 HBL1_DMSO_200M_050219_1,19238,FQMPTPIQM False True HALPATVWSL 92.41128 547.804064929485 1563314.125 19218.0 ENST00000485431.1_1_X:48771410-48771858:-|nuORF;;ENSG00000102096|ENST00000376509|PIM2 5.090446949005127 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19240 92.416 1.8 35672000.0 25 0 6708200.0 + 7494 EGYLIPIR 8 64 480.7794978968272 959.5444428604544 2 480.7801696658134 MULTI CID FTMS 0 0 0 19239 29592134.0 0.7114675880761726 1 -0.160552978515625 1 Unmodified _EGYLIPIR_ REV__ENSG00000038274|ENST00000321757|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-2|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-3|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-4|MAT2B 36.04419817259434 0.3004715606373109 3 {[DA]|[EG]}Y{I|L}{I|L} 5 -1 46.95 0.0 0.0 4.893 0.0 0.0 0.0 381.22701213515575 381.22701213515575 37.496593117612775 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[DA]|[EG]}Y{I|L}{I|L} 4.893 + + 37 + 1 1.411 55585.6 1.0 13436 5802 19239 HBL1_DMSO_200M_050219_1,19240 HBL1_DMSO_200M_050219_1,19240,EGYLIPIR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19241 92.417 2.0 22228000.0 25 0 3881600.0 + 21579 LPKNILIM 8 70 471.2962775002167 940.5780020672336 2 471.2965881228447 MULTI CID FTMS 0 0 0 19239 30255210.0 0.6540937836205762 -1 0.1177749633789062 2 Unmodified _LPKNILIM_ REV__ENSG00000154415|ENST00000284601|PPP1R3A 26.34127834903884 0.4900704351052977 3 [{I|L}P]K{I|L}N{I|L} 6 -1 40.283 0.0 0.0 4.2828 0.0 0.0 0.0 259.11221772568973 259.11221772568973 11.225563234822804 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.805462187404089 [{I|L}P]K{I|L}N{I|L} 4.2828 - 137 1 1.411 44264.2 1.0 13437 5802 19239 HBL1_DMSO_200M_050219_1,19241 HBL1_DMSO_200M_050219_1,19241,LPKNILIM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19242 92.418 47.0 1702300.0 25 0 237480.0 + 41572 VPPENIIYI 9 88 529.3002944283521 1056.586035923504 2 529.3005248904228 MULTI CID FTMS 0 0 0 19239 1143318.75 0.5042078371214451 3 -0.35015869140625 3 Unmodified _VPPENIIYI_ ENSG00000155096|ENST00000337198|AZIN1;ENST00000522311.1_1_8:103848756-103855898:-|nuORF 32.30548876998284 0.1201446275138228 3 N{I|L}V{I|L}Y{I|L} 6 5 40.52 0.0 0.0 3.835 0.0 0.0 323.1485768048844 0.0 323.1485768048844 0.0 -2.3919159875170948 -2.3919159875170948 0.0 0 0.7742275032520141 0.0 0.0 0.6747425010840047 N{I|L}V{I|L}Y{I|L} 3.835 - 362 1 1.411 67369.7 1.0 13438 5802 19239 HBL1_DMSO_200M_050219_1,19242 HBL1_DMSO_200M_050219_1,19242,VPPENIIYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19243 92.419 46.0 1516300.0 25 0 360120.0 + 20020 LIMQRTLL 8 81 494.3029717715175 986.591390609835 2 494.3031799197197 MULTI CID FTMS 0 0 0 19239 1103544.375 0.2043387652361429 3 -0.35015869140625 4 Unmodified _LIMQRTLL_ REV__ENST00000380752.9_1_13:30084114-30084255:-|nuORF 24.67388899826682 0.525179942228231 3 {I|L}{I|L}[C(Carbamidomethyl (C))S]R{I|L}{I|L}{I|L} 8 -1 + 46.604 0.0 0.0 4.7237 4.7237 84.481 0.0 0.0 0.0 10.211892990699384 16.40978057358332 10.211892990699384 10.211892990699384 0 0.5 1.6989700043360187 0.0 0.0 {I|L}{I|L}[C(Carbamidomethyl (C))S]R{I|L}{I|L}{I|L};[TP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[QT]R{I|L}{I|L}{I|L};[VS]{[WT]|[RM]}R{I|L}{I|L}{I|L};[VS]{[WT]|[RM]}[VG]{I|L}{I|L}{I|L} 4.7237;3.6887;2.5181;2.3914;1.4526 -;-;-;-;- 254 1 1.411 57883.0 1.0 13439 5802 19239 HBL1_DMSO_200M_050219_1,19243 HBL1_DMSO_200M_050219_1,19243,LIMQRTLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19244 92.423 181.0 838980.0 25 0 73739.0 + 20770 YPLLISRI 8 114 487.3068353895159 972.599117845832 2 487.8061096072197 MULTI CID FTMS 0 0 0 19239 579998.0625 0.4892634262135566 1 -0.160552978515625 5 Unmodified _LLTSALSRL_ ENST00000474428.6_1_1:155922555-155932010:-|nuORF;ENST00000608543.1_1_1:155931890-155932010:-|nuORF;ENSG00000116584|ENST00000361247|ARHGEF2;nc|ENSG00000116584|Q92974-3|ARHGEF2;nc|ENSG00000116584|Q92974-2|ARHGEF2 26.88365393820708 0.1891292719743517 3 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}P[SG] 9 7 + 40.96 0.0 0.0 4.2114 4.2114 72.147 0.0 0.0 0.0 1.383772674622854 1.383772674622854 1.383772674622854 1.383772674622854 0 0.0 0.0 0.0 0.9489700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}P[SG];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L}SR{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}{I|L}P{I|L}[SG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}{I|L}SR{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}EVK{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}EVK{I|L} 4.2114;4.0691;3.9019;3.7596;3.1982;2.9871;2.8887;2.6776 -;-;-;-;-;-;-;- 230 1 1.411 121193.4 1.0 13440 5802 19239 HBL1_DMSO_200M_050219_1,19244 HBL1_DMSO_200M_050219_1,19244,LLTSALSRL False False YPLLISRI 92.422761 487.80610960722 34583880.0 19239.0 ENST00000474428.6_1_1:155922555-155932010:-|nuORF;;ENST00000608543.1_1_1:155931890-155932010:-|nuORF;;ENSG00000116584|ENST00000361247|ARHGEF2;;nc|ENSG00000116584|Q92974-3|ARHGEF2;;nc|ENSG00000116584|Q92974-2|ARHGEF2 2.7091227769851685 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19245 92.425 100.0 1384600.0 25 0 136950.0 + 18360 KVPDVLPVL 9 125 490.313642983486 978.612733033772 2 490.3132507205009 MULTI CID FTMS 0 0 0 19239 460146.5 0.3435375359048077 3 -0.35015869140625 6 Unmodified _KVPDVLPVL_ ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA 69.10491478415734 0.0214449631113747 3 [VP]DKV{I|L}PV{I|L} 9 2 + 79.337 0.0 0.0 8.1071 8.1071 81.257 0.0 0.0 0.0 17.408259045163668 14.973024840566469 14.973024840566469 0.0046321502212265 0 1.548455006504028 1.5228787452803376 0.3252574989159953 0.6989700043360187 [VP]DKV{I|L}PV{I|L};[VP]D{I|L}KVPV{I|L};[VP]KVD{I|L}PV{I|L};[VP]{I|L}DKVPV{I|L};[VP]KDV{I|L}PV{I|L};[VP]DK{I|L}VPV{I|L};[VP]{I|L}[QT]{I|L}PV{I|L};[VP]KVEVPV{I|L};[VP]KD{I|L}VPV{I|L};[VP]{I|L}SAA{I|L}PV{I|L} 8.1071;8.1067;7.7403;7.7;7.4919;7.2431;6.9556;6.8762;6.6279;6.6013 -;-;-;-;-;-;-;-;-;- 1093 1 1.411 107070.1 1.0 13441 5802 19239 HBL1_DMSO_200M_050219_1,19245 HBL1_DMSO_200M_050219_1,19245,KVPDVLPVL True True KVPDVLPVL 92.424911 490.313250720501 15319798.0 19239.0 nc|ENSG00000011007|Q14241-1|ELOA;;ENSG00000011007|ENST00000613537|ELOA 4.719098567962647 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19246 92.428 143.0 646410.0 25 0 60478.0 18598 LADSFLYGL 9 111 499.7651658010952 997.5157786689904 2 499.7513305544853 MULTI CID FTMS 0 0 0 -1 0 7 Unmodified _LADSFLYGL_ ENSG00000137460|ENST00000511601|FHDC1 13.50788311687929 0.4710407108020397 3 {NN|[MP]|[D{I|L}]|[EV]}A[QA][NP]D{I|L} 9 7 13.667 0.0 0.0 1.3701 0.0 0.0 0.0 57.03491750682216 57.03491750682216 0.1722914183595527 0.0 0.0 0.0 0 0.0 1.154901959985743 0.4247425010840047 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}A[QA][NP]D{I|L} 1.3701 - 227 1 1.411 74308.3 1.0 13442 5802 19239 HBL1_DMSO_200M_050219_1,19246 HBL1_DMSO_200M_050219_1,19246,LADSFLYGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19247 92.437 543.0 422440.0 25 0 71192.0 19813 LGVSPPPGAV 10 117 893.5097577302794 892.5024812636793 1 893.5104247927666 MULTI CID FTMS 0 0 0 19239 218065.75 0.2907001419818655 1 -0.160552978515625 8 Unmodified _LGVSPPPGAV_ ENSG00000173064|ENST00000682272|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4 25.399314129420983 0.3980215340001851 3 [VG]AY[KS]VAV 9 6 + 44.892 0.0 0.0 5.0299 5.0299 80.591 0.0 0.0 0.0 3.4146975153499426 8.728721920568248 3.4146975153499426 5.453715727355963 0 0.5 2.0 0.5796896906561032 0.6505149978319906 [VG]AY[KS]VAV;[VG]AY[KS]G{I|L}V;[VG]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V{I|L}V;[VG]AYG[KS]{I|L}V;[VG]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VV{I|L};[VG]AY[KS]VG{I|L};[VG]{I|L}[YQ][KS]V;[VG]AYAV[KS]V;[VG]AP[PG][PS]{I|L}V;[VG]AYG{I|L}[KS]V 5.0299;4.4188;4.3755;3.9266;3.7009;3.6486;3.6046;3.5751;3.242;3.0828 -;-;-;-;-;-;-;-;-;- 2333 1 1.411 153138.3 1.0 13443 5802 19239 HBL1_DMSO_200M_050219_1,19247 HBL1_DMSO_200M_050219_1,19247,LGVSPPPGAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19248 92.447 537.0 367490.0 25 0 108450.0 + 16877 KIFEMLEGV 9 101 1065.5650603653016 1064.5577838987017 1 1065.565966784954 MULTI CID FTMS 0 0 0 19239 200557.1875 0.5814836670610677 1 -0.160552978515625 9 Unmodified _KIFEMLEGV_ chrX:135779641-135781561|13|36.23|0.53|6.09|-|ENST00000617203|CT45A5,CT45A5;chrX:135781735-135785220|13|147.77|0.31|8.87|-|ENST00000487941|CT45A5,CT45A5;chrX:135881315-135882536|15|139.0|1.0|7.12|-|ENST00000617981|CT45A10,CT45A10;chrX:135885350-135888848|10|46.0|0.05|9.87|-|ENST00000611668|CT45A10,CT45A10;ENSG00000228836|ENST00000698999|CT45A5;ENSG00000268940|ENST00000594565|CT45A1;ENSG00000269096|ENST00000598716|CT45A3;ENSG00000269586|ENST00000682849|CT45A10;ENSG00000270946|ENST00000620704|CT45A9;ENSG00000271449|ENST00000612907|CT45A2;ENSG00000273696|ENST00000610598|CT45A7;ENSG00000278085|ENST00000611660|CT45A8;ENSG00000278289|ENST00000620654|CT45A6 96.36657018975838 0.0123932121270252 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KEM{I|L}EGV 9 2 + 75.336 0.0 0.0 7.0767 7.0767 80.218 0.0 0.0 0.0 0.7747579965705 6.478174818886373 0.7747579965705 0.7747579965705 0 1.2491348669726232 0.0 1.7104093769761874 0.2887254899964357 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KEM{I|L}EGV;[{M(Oxidation (M))|F}E]M{I|L}K{I|L}EGV;[{M(Oxidation (M))|F}E]{I|L}KM{I|L}EGV;[{M(Oxidation (M))|F}E]P{M(Oxidation (M))|F}K{I|L}EGV;[{M(Oxidation (M))|F}E]{I|L}MK{I|L}EGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EKM{I|L}EGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KEM{I|L}WV;[{M(Oxidation (M))|F}E]M{I|L}K{I|L}WV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KEME{I|L}GV;[EP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}EGV 7.0767;7.004;6.8002;6.7212;6.4384;6.1436;6.1106;6.0378;5.9604;5.9273 -;-;-;-;-;-;-;-;-;- 4094 1 1.411 129755.3 1.0 13444 5802 19239 HBL1_DMSO_200M_050219_1,19248 HBL1_DMSO_200M_050219_1,19248,KIFEMLEGV True True KIFEMLEGV 92.446815 1065.56596678495 46486014.5 19239.0 ENSG00000269096|ENST00000598716|CT45A3;;ENSG00000271449|ENST00000612907|CT45A2;;ENSG00000268940|ENST00000594565|CT45A1;;chrX:135885350-135888848|10|46.0|0.05|9.87|-|ENST00000611668|CT45A10,CT45A10;;ENSG00000228836|ENST00000698999|CT45A5;;chrX:135881315-135882536|15|139.0|1.0|7.12|-|ENST00000617981|CT45A10,CT45A10;;ENSG00000270946|ENST00000620704|CT45A9;;ENSG00000278289|ENST00000620654|CT45A6;;ENSG00000278085|ENST00000611660|CT45A8;;ENSG00000273696|ENST00000610598|CT45A7;;ENSG00000269586|ENST00000682849|CT45A10;;chrX:135779641-135781561|13|36.23|0.53|6.09|-|ENST00000617203|CT45A5,CT45A5;;chrX:135781735-135785220|13|147.77|0.31|8.87|-|ENST00000487941|CT45A5,CT45A5 7.151516596476237 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19249 92.458 627.0 244920.0 25 0 42364.0 -1 0 116 700.4245668776739 699.4172904110739 1 700.4247314333916 MULTI CID FTMS 0 0 0 19239 181485.125 0.306020777815975 3 -0.35015869140625 10 3 {I|L}D{I|L}VQ{I|L} 6 -1 + 71.833 0.0 0.0 10.27 10.27 88.918 0.0 0.0 0.0 42.83645560927063 12.307131330965715 12.307131330965715 3.4999344677648736 0 1.924742501084005 1.3010299956639813 0.4247425010840047 0.8494850021680094 {I|L}D{I|L}VQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}VQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}V[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}QV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}N{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}V{[VA]|[{I|L}G]}A;{NN|[MP]|[D{I|L}]|[EV]}V{I|L}Q{I|L};{I|L}D{I|L}V[AG]{I|L};[{I|L}V]EVQ{I|L};{[QN]|[E{I|L}]|[KN]}VVQ{I|L} 10.27;9.77;8.4231;8.3911;8.3648;7.98;7.9544;7.709;7.626;7.1667 -;-;-;-;-;-;-;-;-;- 541 + 1 1.411 115543.5 1.0 13445 5802 19239 HBL1_DMSO_200M_050219_1,19249 HBL1_DMSO_200M_050219_1,19249, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19250 92.472 800.0 349990.0 25 0 50476.0 + 15547 IPWKVPGL 8 201 455.2814043667098 908.5482558002196 2 455.2816039919853 MULTI CID FTMS 0 0 0 19239 168415.34375 0.340501893793407 1 -0.160552978515625 11 Unmodified _IPWKVPGL_ ENSG00000174231|ENST00000304992|PRPF8 59.79521254764295 0.1151759508933577 3 {I|L}PWKVGP{I|L} 8 2 + 73.634 0.0 0.0 8.1045 8.1045 83.675 0.0 0.0 0.0 2.2577249674798736 10.804495475693544 2.2577249674798736 1.4259745431819797 0 1.2521934810768762 2.0 0.0 0.0 {I|L}PWKVGP{I|L};{I|L}PWKVPG{I|L};WP{I|L}KVGP{I|L};WP{I|L}KVPG{I|L};{I|L}PWKVPAV;WP{I|L}KVPAV;{I|L}PWKVG{I|L}P;WP{I|L}KVG{I|L}P;{I|L}PWKVAPV;WP{I|L}KVAPV 8.1045;7.9476;7.856;7.6991;6.9153;6.6668;6.6647;6.4162;6.1859;5.9374 -;+;-;-;-;-;-;-;-;- + 1352 + 1 1.411 212336.6 0.9900000095367432 13446 5802 19239 HBL1_DMSO_200M_050219_1,19250 HBL1_DMSO_200M_050219_1,19250,IPWKVPGL True True IPWKVPGL 92.471575 455.281603991985 13637139.0 19239.0 ENSG00000174231|ENST00000304992|PRPF8 5.068565527598064 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19251 92.484 735.0 569260.0 25 0 72273.0 20182 LLACFLILI 9 227 509.8220242588709 1017.6294955845418 2 509.8180724978447 MULTI CID FTMS 0 0 0 19239 163838.578125 0.1475736056091787 3 -0.35015869140625 12 Unmodified _LLACFLILI_ ENST00000561424.5_1_15:45009826-45011035:+|nuORF 36.46614268402704 0.0948557732959553 3 {I|L}{I|L}[{M(Oxidation (M))|F}V]{I|L}V{M(Oxidation (M))|F}T 8 5 32.317 0.0 0.0 3.1757 0.0 0.0 0.0 82.06702600650624 82.06702600650624 18.33719964390957 0.0 0.0 0.0 0 0.75 2.0 0.5387254899964358 0.0 {I|L}{I|L}[{M(Oxidation (M))|F}V]{I|L}V{M(Oxidation (M))|F}T 3.1757 - 6463 + 1 1.411 315145.1 1.0 13447 5802 19239 HBL1_DMSO_200M_050219_1,19251 HBL1_DMSO_200M_050219_1,19251,LLACFLILI True False ILDPHVVLL 92.484308 509.818072497845 16825342.0 19239.0 ENST00000574867.5_1_17:5292093-5322970:-|nuORF;;ENSG00000108559|ENST00000573584|NUP88 4.363272428512573 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19252 92.495 589.0 44465.0 25 0 2869.0 -1 0 55 1029.474780261517 0 1029.474780261517 PEAK CID FTMS 0 0 0 -1 0 13 3 GD{I|L}STV 6 -1 34.157 0.0 0.0 1.6606 0.0 0.0 656.2769199564688 825.3607860198879 1481.6377059763568 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GD{I|L}STV 1.6606 - 44 + 1 1.411 30036.7 1.0 13448 5802 19239 HBL1_DMSO_200M_050219_1,19252 HBL1_DMSO_200M_050219_1,19252, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19253 92.508 661.0 347470.0 25 0 18267.0 + 27173 PGAALLLAAV 10 144 895.561767206342 894.5544907397419 1 895.5623046755791 MULTI CID FTMS 0 0 0 19239 131107.671875 0.021797913720061 10 -1.100372314453125 14 Unmodified _PGAALLLAAV_ REV__ENSG00000141753|ENST00000269593|IGFBP4 40.44857923139169 0.1528301697436547 3 [PG]A{I|L}{I|L}AAA{I|L}V 10 -1 + 52.361 0.0 0.0 5.8533 5.8533 82.044 0.0 0.0 0.0 4.259687322722812 16.532125137753432 4.259687322722812 4.259687322722812 0 0.0 1.154901959985743 0.0 0.0 [PG]A{I|L}{I|L}AAA{I|L}V;[VP]AA{I|L}AAA{I|L}V;[QP]{I|L}{I|L}AAA{I|L}V;[PG]A{I|L}{[NV]|[RG]}{I|L}{I|L}V;[PG]A{I|L}{I|L}AA{I|L}AV;[PG]{I|L}A{I|L}AAA{I|L}V;[PG]A{I|L}AAA{I|L}{I|L}V;[PG]A{I|L}{I|L}{I|L}AAAV;[PG]A{I|L}{I|L}{[NV]|[RG]}{I|L}V;[PG]A{[NV]|[RG]}{I|L}{I|L}{I|L}V 5.8533;5.3771;5.3662;5.3624;5.32;5.2451;5.1803;5.1055;5.0945;5.0259 -;-;-;-;-;-;-;-;-;- 2463 1 1.411 151762.0 1.0 13449 5802 19239 HBL1_DMSO_200M_050219_1,19253 HBL1_DMSO_200M_050219_1,19253,PGAALLLAAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19254 92.52 693.0 62921.0 25 0 4820.7 -1 0 65 1118.345874011517 0 1118.345874011517 PEAK CID FTMS 0 0 0 -1 0 15 3 Q 1 -1 5.4846 0.0 0.0 0.24543 0.0 0.0 1166.0138229632928 937.5565783120608 2103.5704012753536 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.24543 - 13 + 1 1.411 35303.6 1.0 13450 5802 19239 HBL1_DMSO_200M_050219_1,19254 HBL1_DMSO_200M_050219_1,19254, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19255 92.532 687.0 118890.0 25 0 5292.2 -1 0 97 1089.005047953034 0 1088.994067370892 PEAK CID FTMS 0 0 0 -1 0 16 3 DEEDAMS{I|L}DN{M(Oxidation (M))|F}VY{I|L}A 15 -1 65.079 0.0 0.0 2.9908 0.0 0.0 260.1139034238434 200.10492883853752 460.21883226238094 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 DEEDAMS{I|L}DN{M(Oxidation (M))|F}VY{I|L}A 2.9908 - 687 + 1 1.411 58018.4 1.0 13451 5802 19239 HBL1_DMSO_200M_050219_1,19255 HBL1_DMSO_200M_050219_1,19255, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19256 92.535 95.0 492450.0 25 0 75278.0 + 11399 FVFGDENGTVSL 12 71 642.8087950244022 1283.6030371156044 2 642.8072387576103 MULTI CID FTMS 0 0 0 19239 100699.46875 0.0754818080949231 -2 0.1966705322265625 17 Unmodified _GGLWYWCSISL_ ENSG00000116455|ENST00000235090|WDR77;nc|ENSG00000116455|Q9BQA1-2|WDR77 10.073929032068715 0.8255972128077141 3 S{I|L} 2 9 24.222 0.0 0.0 1.887 0.0 0.0 1065.4760057208762 0.0 1065.4760057208762 0.0 9.969165662315689 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + S{I|L} 1.887 + + 76 + 1 1.411 42820.2 1.0 13452 5802 19239 HBL1_DMSO_200M_050219_1,19256 HBL1_DMSO_200M_050219_1,19256,GGLWYWCSISL False True FVFGDENGTVSL 92.534958 642.80723875761 14633510.0 19239.0 ENSG00000116455|ENST00000235090|WDR77;;nc|ENSG00000116455|Q9BQA1-2|WDR77 5.109881083170573 2.0 False 12.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19257 92.546 657.0 61916.0 25 0 4633.7 -1 0 66 890.0115844607353 0 890.0115844607353 PEAK CID FTMS 0 0 0 -1 0 18 3 A 1 -1 8.9794 0.0 0.0 0.50503 0.0 0.0 818.4641046692035 885.4890230768186 1703.953127746022 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 A 0.50503 - 20 + 1 1.411 36573.9 1.0 13453 5802 19239 HBL1_DMSO_200M_050219_1,19257 HBL1_DMSO_200M_050219_1,19257, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19258 92.56 800.0 267660.0 25 0 42609.0 + + 38234 NALTLIRL 8 159 457.7871389710909 913.559725008982 2 457.7872497439384 MULTI CID FTMS 0 0 0 19239 103585.984375 0.2936306515625555 -1 0.1177749633789062 19 Unmodified _TPTTLLLR_ ENST00000521621.5_1_5:178047568-178050263:-|nuORF 64.23631603340823 0.116217441302575 3 {[DA]|[EG]}{I|L}T{I|L}{I|L}R{I|L} 8 -1 + 78.081 0.0 0.0 8.5469 8.5469 89.856 0.0 0.0 0.0 22.21848749616357 5.371191843949475 5.371191843949475 5.211440694835829 0 1.0994850021680094 2.0 0.7614393726401688 0.5649093276264391 {[DA]|[EG]}{I|L}T{I|L}{I|L}R{I|L};{[DA]|[EG]}{I|L}{I|L}T{I|L}R{I|L};{[DA]|[EG]}{I|L}T{I|L}{I|L}{I|L}R;{[DA]|[EG]}{I|L}{I|L}T{I|L}{I|L}R;[{I|L}T]{I|L}R{I|L}{I|L}{[DA]|[EG]};[{I|L}T]{I|L}[VG]{I|L}{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}[VG]{I|L}PV 8.5469;7.9764;7.9589;7.3885;2.7218;2.4698;0.21975 -;-;-;-;-;-;- 647 + 1 1.411 168077.5 0.8299999833106995 13454 5802 19239 HBL1_DMSO_200M_050219_1,19258 HBL1_DMSO_200M_050219_1,19258,TPTTLLLR False False NALTLIRL 92.560235 457.787249743938 0.0 19239.0 ENST00000521621.5_1_5:178047568-178050263:-|nuORF -0.125610331694285 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19259 92.572 669.0 113940.0 25 0 18999.0 + 15335 IPLQLVTV 8 76 882.56598885557 881.55871238897 1 882.5661498904228 MULTI CID FTMS 0 0 0 19239 98073.1640625 0.2987662381738133 3 -0.35015869140625 20 Unmodified _IPLQLVTV_ ENSG00000172845|ENST00000310015|SP3;ENST00000465379.1_1_2:174774671-174778005:-|nuORF;nc|ENSG00000172845|Q02447-2|SP3;nc|ENSG00000172845|Q02447-3|SP3;nc|ENSG00000172845|Q02447-4|SP3;nc|ENSG00000172845|Q02447-5|SP3;nc|ENSG00000172845|Q02447-6|SP3 46.020951573049366 0.1579632664462935 3 [{I|L}P]Q{I|L}V{I|L}TV 8 2 + 69.418 0.0 0.0 7.8744 7.8744 85.062 0.0 0.0 0.0 10.969100130080562 16.40978057358332 10.969100130080562 2.525749891599532 0 0.0 1.3979400086720375 0.4247425010840047 0.3054621874040891 [{I|L}P]Q{I|L}V{I|L}TV;[{I|L}P]{I|L}QV{I|L}TV;[{I|L}P]Q{I|L}{I|L}VTV;[{I|L}P]{I|L}Q{I|L}VTV;[{I|L}P]Q{I|L}VT{I|L}V;[Q{I|L}]P{I|L}V{I|L}TV;[{I|L}P]{I|L}QVT{I|L}V;[{I|L}P]Q{I|L}{I|L}S{I|L}V;[{I|L}P][AG]{I|L}V{I|L}TV;[Q{I|L}]{I|L}PV{I|L}TV 7.8744;7.5879;7.5329;7.2464;6.8724;6.6301;6.5859;6.531;6.4773;6.2886 -;-;-;+;-;-;-;-;-;- + 437 1 1.411 59012.1 1.0 13455 5802 19239 HBL1_DMSO_200M_050219_1,19259 HBL1_DMSO_200M_050219_1,19259,IPLQLVTV False True IPLQLVTV 92.571891 882.566149890423 3399855.0 19239.0 nc|ENSG00000172845|Q02447-3|SP3;;nc|ENSG00000172845|Q02447-2|SP3;;nc|ENSG00000172845|Q02447-6|SP3;;nc|ENSG00000172845|Q02447-5|SP3;;ENST00000465379.1_1_2:174774671-174778005:-|nuORF;;ENSG00000172845|ENST00000310015|SP3;;nc|ENSG00000172845|Q02447-4|SP3 3.3441633383433023 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19261 92.576 3.4 11682000.0 25 0 1108900.0 + 29285 QIFNGTFVKL 10 70 583.8322092769051 1165.6498656206102 2 583.8326904177666 MULTI CID FTMS 0 0 0 19260 15767870.0 0.893516421842962 1 -0.052032470703125 1 Unmodified _QIFNGTFVKL_ ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF 27.22323531849824 0.3570408936368626 3 [Q{I|L}]{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}V{I|L}K 10 2 + 62.741 0.0 0.0 5.3825 5.3825 85.112 0.0 0.0 0.0 50.95799639969529 11.091223126737653 11.091223126737653 9.164539485499256 0 0.3252574989159953 2.0 0.0 0.3807196863200844 [Q{I|L}]{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}V{I|L}K;[Q{I|L}]{M(Oxidation (M))|F}GGGT{M(Oxidation (M))|F}V{I|L}K 5.3825;4.5963 -;- 88 + 1 1.399 36063.4 1.0 13456 5803 19260 HBL1_DMSO_200M_050219_1,19261 HBL1_DMSO_200M_050219_1,19261,QIFNGTFVKL False True QIFNGTFVKL 92.576112 583.832690417767 1015688400.0 19260.0 ENST00000397636.2_1_7:99737498-99738123:-|nuORF;;ENST00000461190.1_1_3:123871117-123871351:-|nuORF;;ENSG00000147604|ENST00000352983|RPL7 8.946510314941406 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19262 92.577 9.1 4580700.0 25 0 697290.0 + 859 AEVDVNQKLLL 11 71 621.3578322744459 1240.7011116156916 2 621.3588744997978 MULTI CID FTMS 0 0 0 19260 5483667.0 0.0483437112296742 5 -0.5493698120117188 2 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 34.93206674587334 0.2904649469012649 3 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L} 12 -1 + 68.866 0.0 0.0 5.5505 5.5505 81.891 0.0 0.0 0.0 8.239087409443187 7.447274948966935 7.447274948966935 4.815534464597704 0 2.1307196863200843 1.5228787452803376 0.4247425010840047 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}AVDEG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA[W{I|L}]{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}G{I|L}DEG{I|L}{I|L};{[DA]|[EG]}{I|L}[{I|L}A]{I|L}VDEG{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}AVDW{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}W{I|L}G{I|L}{I|L};{[VA]|[{I|L}G]}EDVA{I|L}{I|L}EG{I|L}{I|L} 5.5505;5.1624;5.0598;4.8865;4.8172;4.7778;4.6771;4.6717;4.593;4.5019 -;-;-;-;-;-;-;-;-;- 2541 1 1.399 36335.1 1.0 13457 5803 19260 HBL1_DMSO_200M_050219_1,19262 HBL1_DMSO_200M_050219_1,19262,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19263 92.578 5.0 11891000.0 25 0 1539100.0 + 32102 RVLQNLLTI 9 73 535.340103053445 1068.66565317369 2 535.3403198122978 MULTI CID FTMS 0 0 0 19260 11711225.0 1.0 0 0.0 3 Unmodified _RVLQNLLTI_ ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2 29.081581746732265 0.1611639662936252 3 [{I|L}T]{I|L}[WP]{I|L}{I|L}T{I|L} 9 4 + 58.579 0.0 0.0 5.4815 5.4815 90.366 0.0 0.0 0.0 8.18513709057612 32.63682493045401 8.18513709057612 58.57894990110104 0 0.9247425010840048 1.6989700043360187 0.0 0.0 [{I|L}T]{I|L}[WP]{I|L}{I|L}T{I|L} 5.4815 - 87 1 1.399 54413.0 1.0 13458 5803 19260 HBL1_DMSO_200M_050219_1,19263 HBL1_DMSO_200M_050219_1,19263,RVLQNLLTI False True RVLQNLLTI 92.57847 535.340319812298 295856472.0 19260.0 nc|ENSG00000118971|P30279-2|CCND2;;ENSG00000118971|ENST00000261254|CCND2 4.604267040888469 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19264 92.58 19.0 4373700.0 25 0 730650.0 + 3179 AVVLPLARI 9 61 476.3211978037891 950.6278426743784 2 476.3212463259697 MULTI CID FTMS 0 0 0 19260 3456691.75 0.8598993452415675 -1 0.160552978515625 4 Unmodified _AVVLPLARI_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 42.09456458481378 0.0639583784996157 3 {[VA]|[{I|L}G]}V{I|L}{I|L}[RD]{I|L} 8 2 62.484 0.0 0.0 6.573 0.0 0.0 0.0 68.05143152408436 68.05143152408436 50.80198135264581 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.7614393726401688 0.4247425010840047 {[VA]|[{I|L}G]}V{I|L}{I|L}[RD]{I|L} 6.573 - 210 + 1 1.399 69293.0 1.0 13459 5803 19260 HBL1_DMSO_200M_050219_1,19264 HBL1_DMSO_200M_050219_1,19264,AVVLPLARI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19265 92.581 22.0 2348400.0 25 0 387050.0 + 3916 DALGKLISI 9 66 465.2871294596233 928.5597059860468 2 465.2874328494072 MULTI CID FTMS 0 0 0 19260 3219111.0 0.099029026040198 4 -0.4025192260742187 5 Unmodified _DALGKLISI_ ENSG00000089154|ENST00000300648|GCN1 49.55428908609986 0.0413471690215031 3 {[DA]|[EG]}{I|L}[KG]{I|L}{I|L}{[TV]|[{I|L}S]} 9 0 + 41.646 0.0 0.0 4.485 4.485 85.672 0.0 0.0 0.0 3.1336373073770574 11.23975896461701 3.1336373073770574 21.25447181216777 0 1.424742501084005 2.0 0.3807196863200844 0.0 + + {[DA]|[EG]}{I|L}[KG]{I|L}{I|L}{[TV]|[{I|L}S]};[KG]{I|L}{I|L}{I|L}{[DA]|[EG]}{[TV]|[{I|L}S]};[KG]{I|L}{I|L}{[DA]|[EG]}{I|L}{[TV]|[{I|L}S]};[KG]{I|L}{[DA]|[EG]}{I|L}{I|L}{[TV]|[{I|L}S]};{I|L}{I|L}[KG]{I|L}{[DA]|[EG]}{[TV]|[{I|L}S]};{I|L}{I|L}[KG]{[DA]|[EG]}{I|L}{[TV]|[{I|L}S]} 4.485;2.196;2.0922;1.3395;0.34352;0.2397 +;-;-;-;-;- + 114 1 1.399 42685.0 1.0 13460 5803 19260 HBL1_DMSO_200M_050219_1,19265 HBL1_DMSO_200M_050219_1,19265,DALGKLISI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19266 92.582 23.0 2329700.0 25 0 726580.0 + 25672 NGIKVLLI 8 65 435.2945814683795 868.574610003559 2 435.2946044802666 MULTI CID FTMS 0 0 0 19260 2949141.75 1.0 0 0.0 6 Unmodified _NGIKVLLI_ ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 63.562846038646086 0.116059504757595 3 [NG]{I|L}KV{I|L}{I|L}{I|L} 8 0 + 58.734 0.0 0.0 6.7621 6.7621 93.532 0.0 0.0 0.0 17.614393726401687 43.249256301612746 17.614393726401687 25.98226703369044 0 0.8494850021680094 1.3010299956639813 0.0 1.2614393726401687 + + [NG]{I|L}KV{I|L}{I|L}{I|L};{I|L}{I|L}WV{I|L}{I|L}{I|L};[{I|L}V]K[NG]{I|L}{I|L}{I|L};[{I|L}V]K{I|L}[NG]{I|L}{I|L};[{I|L}V][W{I|L}]{I|L}{I|L}{I|L} 6.7621;3.7707;2.7339;2.2956;1.1193 +;-;-;-;- + 67 1 1.399 44371.5 1.0 13461 5803 19260 HBL1_DMSO_200M_050219_1,19266 HBL1_DMSO_200M_050219_1,19266,NGIKVLLI True True NGIKVLLI 92.582005 435.294604480267 89798856.0 19260.0 ENSG00000119912|ENST00000265986|IDE;;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 3.72647245724996 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19267 92.583 31.0 445190.0 25 0 60061.0 + 35829 SVLDDNKLLTL 11 33 615.8511100545097 1229.6876671758191 2 615.8511230349541 MULTI CID FTMS 0 0 0 19260 2340937.5 0.1934997155701417 2 -0.189605712890625 7 Unmodified _SVLDDNKLLTL_ ENSG00000197102|ENST00000360184|DYNC1H1 9.38312468134398 0.8308777417566128 3 T{I|L} 2 9 13.174 0.0 0.0 1.0713 0.0 0.0 997.5452396629272 0.0 997.5452396629272 0.0 9.194699959806984 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + T{I|L} 1.0713 + + 8 + 1 1.399 19099.7 1.0 13462 5803 19260 HBL1_DMSO_200M_050219_1,19267 HBL1_DMSO_200M_050219_1,19267,SVLDDNKLLTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19268 92.584 33.0 370630.0 25 0 88304.0 -1 0 28 545.328950023606 1632.965020671018 3 545.3295776247978 MULTI CID FTMS 0 0 0 19260 1489947.125 0.5424178039490509 2 -0.189605712890625 8 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.399 20416.6 1.0 13463 5803 19260 HBL1_DMSO_200M_050219_1,19268 HBL1_DMSO_200M_050219_1,19268, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19269 92.586 31.0 470520.0 25 0 47441.0 + 42225 VSKLGELVY 9 37 504.2923429517529 1006.5701329703058 2 504.2923766970634 MULTI CID FTMS 0 0 0 19260 1349238.25 0.1195013934200812 4 -0.4025192260742187 9 Unmodified _VSKLGELVY_ REV__ENSG00000107938|ENST00000356792|EDRF1;REV__ENST00000481600.5_1_10:127417653-127452038:+|nuORF;REV__ENST00000525091.5_1_10:127408310-127436620:+|nuORF;REV__nc|ENSG00000107938|Q3B7T1-3|EDRF1;REV__nc|ENSG00000107938|Q3B7T1-5|EDRF1 4.3292370932331545 0.7635526921153418 3 {I|L} 1 -1 11.594 0.0 0.0 1.1518 0.0 0.0 875.4750839974528 0.0 875.4750839974528 0.0 8.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1518 + + 9 + 1 1.399 17934.9 1.0 13464 5803 19260 HBL1_DMSO_200M_050219_1,19269 HBL1_DMSO_200M_050219_1,19269,VSKLGELVY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19270 92.587 53.0 893420.0 25 0 71445.0 + 34082 SLLGDDALVQV 11 76 565.3082011185419 1128.6018493038837 2 565.3083984255791 MULTI CID FTMS 0 0 0 19260 1205732.625 0.2872797792744577 2 -0.189605712890625 10 Unmodified _SLLGDDALVQV_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 36.12702656103203 0.2720571796884491 3 {NN|[MP]|[D{I|L}]|[EV]}AVWS{I|L} 7 8 47.453 0.0 0.0 4.2046 0.0 0.0 0.0 341.1827323137583 341.1827323137583 33.95828234534207 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.174742501084005 0.0 {NN|[MP]|[D{I|L}]|[EV]}AVWS{I|L} 4.2046 - 293 1 1.399 43947.4 1.0 13465 5803 19260 HBL1_DMSO_200M_050219_1,19270 HBL1_DMSO_200M_050219_1,19270,SLLGDDALVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19271 92.588 43.0 1069900.0 25 0 131760.0 + 20484 LLLDVPTAAV 10 88 506.3079342698748 1010.6013156065496 2 506.3080627322197 MULTI CID FTMS 0 0 0 19260 1164870.25 0.0987373728169723 6 -0.62701416015625 11 Unmodified _LLLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 15.847184025352805 0.5816416552707754 3 [{I|L}A]H{M(Oxidation (M))|F}{I|L}N{I|L} 7 9 24.914 0.0 0.0 2.4653 0.0 0.0 0.0 199.11728175328705 199.11728175328705 3.9717699250588367 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [{I|L}A]H{M(Oxidation (M))|F}{I|L}N{I|L} 2.4653 - 244 1 1.399 40946.1 1.0 13466 5803 19260 HBL1_DMSO_200M_050219_1,19271 HBL1_DMSO_200M_050219_1,19271,LLLDVPTAAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19272 92.589 46.0 1366100.0 25 0 135910.0 + 31085 RLLDYVVNI 9 67 552.8238385265514 1103.6331241199027 2 552.8244506716728 MULTI CID FTMS 0 0 0 19260 1026100.0625 0.8254733137067901 -1 0.160552978515625 12 Unmodified _RLLDYVVNI_ ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2 34.93206674587334 0.1032771302489716 3 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVN{I|L} 9 2 + 55.908 0.0 0.0 5.0658 5.0658 80.28 0.0 0.0 0.0 1.706962271689747 38.460696996448576 1.706962271689747 4.960762528683702 0 1.305462187404089 0.0 0.0 0.6989700043360187 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVN{I|L};[VS]{I|L}[TP]YVVN{I|L};{[NV]|[RG]}[RK]YVVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVGG{I|L};[VS]{I|L}[TP]YVVGG{I|L};{[NV]|[RG]}[RK]YVVGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YRR{I|L};[VS]{I|L}[TP]YRR{I|L} 5.0658;4.6163;4.5896;4.2315;3.7859;3.7552;1.898;1.7603 -;-;-;-;-;-;-;- 165 1 1.399 58122.9 1.0 13467 5803 19260 HBL1_DMSO_200M_050219_1,19272 HBL1_DMSO_200M_050219_1,19272,RLLDYVVNI True True RLLDYVVNI 92.589395 552.824450671673 9130782.0 19260.0 ENSG00000197256|ENST00000586659|KANK2;;nc|ENSG00000197256|Q63ZY3-3|KANK2;;nc|ENSG00000197256|Q63ZY3-2|KANK2 6.403095086415608 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19273 92.591 73.0 1019000.0 25 0 121950.0 + 40513 VIVELIYKV 9 90 538.3418222707057 1074.6690916082114 2 538.3416015505791 MULTI CID FTMS 0 0 0 19260 688421.5625 0.1289929724079108 -3 0.3572235107421875 13 Unmodified _VIVELIYKV_ ENSG00000129083|ENST00000439561|COPB1 35.61225514009592 0.0995432151795903 3 V{I|L}VE{I|L}{I|L}YKV 9 0 + 89.633 0.0 0.0 8.3405 8.3405 96.026 0.0 0.0 0.0 58.20615965204567 10.616742845273066 10.616742845273066 16.021825181113627 0 1.1549471895720984 2.0 0.0 0.25 + + V{I|L}VE{I|L}{I|L}YKV;V{I|L}VE{I|L}V[YK]{I|L};V{I|L}V{I|L}{I|L}EYKV;V{I|L}V{I|L}{I|L}D[YK]{I|L} 8.3405;6.8496;5.9613;4.4705 +;-;-;- + 336 + 1 1.399 64384.7 1.0 13468 5803 19260 HBL1_DMSO_200M_050219_1,19273 HBL1_DMSO_200M_050219_1,19273,VIVELIYKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19274 92.592 49.0 946620.0 25 0 43072.0 + 10230 FQMPTPIQM 9 85 546.7638977484446 1091.5132425636891 2 546.7647582888603 MULTI CID FTMS 0 0 0 19260 662986.875 1.0 0 0.0 14 Unmodified _FQMPTPIQM_ ENSG00000278053|ENST00000617633|DDX52 32.30548876998284 0.1201446275138228 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[ET]|[MV]}[KP]DQM 9 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[ET]|[MV]}[KP]D + + 15.217 -1.9732 -0.24229 1.3941 1.3941 48.488 0.0 0.0 0.0 0.0 0.0907372545153606 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[ET]|[MV]}[KP]DQM 1.3941 - 220 + 1 1.399 43004.3 1.0 13469 5803 19260 HBL1_DMSO_200M_050219_1,19274 HBL1_DMSO_200M_050219_1,19274,FQMPTPIQM True True FQMPTPIQM 92.592428 546.76475828886 14922837.125 19260.0 ENSG00000278053|ENST00000617633|DDX52 7.175490220387776 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19275 92.594 90.0 880510.0 25 0 93427.0 + 40670 VLEVLPIYY 9 92 554.8165547673492 1107.6185566014983 2 554.8166381716728 MULTI CID FTMS 0 0 0 19260 609689.625 0.3217796745468051 2 -0.189605712890625 15 Unmodified _VLEVLPIYY_ REV__ENSG00000165475|ENST00000298248|CRYL1;REV__nc|ENSG00000165475|Q9Y2S2-2|CRYL1 16.942295170755138 0.3780752226737986 3 VD 2 -1 30.177 0.0 0.0 2.7245 0.0 0.0 0.0 890.5026978539476 890.5026978539476 9.542425094393256 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 VD 2.7245 - 101 + 1 1.399 63738.3 1.0 13470 5803 19260 HBL1_DMSO_200M_050219_1,19275 HBL1_DMSO_200M_050219_1,19275,VLEVLPIYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19276 92.596 85.0 600900.0 25 0 99597.0 + 26526 NVIDNLIVA 9 87 485.78227411203727 969.5499952908746 2 485.7817565798759 MULTI CID FTMS 0 0 0 19260 574510.75 0.0047650859882452 23 -2.5091094970703125 16 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 29.081581746732265 0.1611639662936252 3 [{I|L}A]WAN{I|L} 6 7 19.39 0.0 0.0 1.9999 0.0 0.0 0.0 298.17675797455973 298.17675797455973 3.98381066942858 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.7742275032520141 [{I|L}A]WAN{I|L} 1.9999 - 298 1 1.399 44038.3 1.0 13471 5803 19260 HBL1_DMSO_200M_050219_1,19276 HBL1_DMSO_200M_050219_1,19276,NVIDNLIVA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19277 92.604 427.0 355160.0 25 0 37986.0 + 21521 LPIPESQVITI 11 156 605.3582563515902 1208.7019597699802 2 605.3584472537041 MULTI CID FTMS 0 0 0 19260 482968.46875 1.0 0 0.0 17 Unmodified _LPIPESQVITI_ ENSG00000130313|ENST00000252603|PGLS 70.33199760932243 0.0314424197347918 3 [EP]SQV{I|L}P{I|L}{I|L}T{I|L} 11 6 + 91.86 0.0 0.0 7.5999 7.5999 81.135 0.0 0.0 0.0 0.5013732161648363 15.070623213458036 0.5013732161648363 0.5013732161648363 0 0.9247425010840048 0.8538719643217619 2.0356668758921828 0.5994850021680094 [EP]SQV{I|L}P{I|L}{I|L}T{I|L};[TP]DQV{I|L}P{I|L}{I|L}T{I|L};[{I|L}T]YY{I|L}P{I|L}{I|L}T{I|L};[{I|L}P]D{[QS]|[NT]}{I|L}P{I|L}{I|L}T{I|L};[EP]SQ{I|L}VP{I|L}{I|L}T{I|L};[TP]DQ{I|L}VP{I|L}{I|L}T{I|L};{[QS]|[NT]}[EP]V{I|L}P{I|L}{I|L}T{I|L};[EP]SQ{I|L}P{I|L}V{I|L}T{I|L};[EP]S[AG]V{I|L}P{I|L}{I|L}T{I|L};[TP]DQ{I|L}P{I|L}V{I|L}T{I|L} 7.5999;7.5584;7.2442;7.0041;6.5457;6.5042;6.4204;6.3589;6.3487;6.3174 -;-;-;-;-;-;-;-;-;- 3994 1 1.399 113613.5 1.0 13472 5803 19260 HBL1_DMSO_200M_050219_1,19277 HBL1_DMSO_200M_050219_1,19277,LPIPESQVITI True True LPIPESQVITI 92.603945 605.358447253704 6708846.5 19260.0 ENSG00000130313|ENST00000252603|PGLS 5.3623660405476885 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19278 92.612 452.0 186340.0 25 0 14058.0 -1 0 106 753.8759296179318 3011.474612605327 4 754.3779785037041 MULTI CID FTMS 0 0 0 19260 448082.65625 0.3026796605209149 5 -0.5493698120117188 18 3 A{I|L}SA{I|L}SD{I|L}HA[HK] 12 -1 37.886 0.0 0.0 1.2581 0.0 0.0 1749.7976849703643 0.0 1749.7976849703643 0.0 23.056398546332304 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 A{I|L}SA{I|L}SD{I|L}HA[HK] 1.2581 - 1182 + 1 1.399 66930.8 1.0 13473 5803 19260 HBL1_DMSO_200M_050219_1,19278 HBL1_DMSO_200M_050219_1,19278, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19279 92.615 165.0 545020.0 25 0 85841.0 + 29297 QIIEHLTLL 9 124 540.3265334726025 1078.6385140120049 2 540.3272582888603 MULTI CID FTMS 0 0 0 19260 381225.875 0.5544497269980383 -2 0.2783279418945312 19 Unmodified _QIIEHLTLL_ ENSG00000108506|ENST00000251334|INTS2;ENST00000583822.5_1_17:59949574-59962361:-|nuORF;nc|ENSG00000108506|Q9H0H0|INTS2 36.506200033944 0.094635877243972 3 {[QN]|[E{I|L}]|[KN]}HT{I|L}{I|L} 6 3 23.05 0.0 0.0 2.137 0.0 0.0 0.0 369.2134333653216 369.2134333653216 -6.844139953946147 0.0 -6.844139953946147 0.0 0 0.0 1.3010299956639813 1.2159784756539755 0.0 {[QN]|[E{I|L}]|[KN]}HT{I|L}{I|L} 2.137 - 655 1 1.399 76788.9 1.0 13474 5803 19260 HBL1_DMSO_200M_050219_1,19279 HBL1_DMSO_200M_050219_1,19279,QIIEHLTLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19280 92.624 490.0 291650.0 25 0 48899.0 + 22494 LPVPPLGL 8 63 805.5191742352296 804.5118977686295 1 805.5190917849541 MULTI CID FTMS 0 0 0 19260 362920.625 0.8405730638452672 -1 0.160552978515625 20 Unmodified _LPVPPLGL_ ENST00000522869.5_1_8:22081488-22084520:-|nuORF 77.1959498837818 0.1016809512730457 3 [{I|L}P]PVP{I|L}G{I|L} 8 2 + 72.912 0.0 0.0 9.0629 9.0629 89.933 0.0 0.0 0.0 17.907300390241687 52.11152964292079 17.907300390241687 4.771212547196626 0 1.3807196863200843 1.6989700043360187 0.0 0.0 [{I|L}P]PVP{I|L}G{I|L};[{I|L}P]PVPG{I|L}{I|L};[{I|L}P]VPP{I|L}G{I|L};[{I|L}P]PVGP{I|L}{I|L};[{I|L}P]VPPG{I|L}{I|L};[{I|L}P]VPGP{I|L}{I|L};[VP]P{I|L}P{I|L}G{I|L};[VP]P{I|L}PG{I|L}{I|L};[VP]{I|L}PP{I|L}G{I|L};[VP]{I|L}PPG{I|L}{I|L} 9.0629;8.4699;7.8768;7.6225;7.2838;6.4364;6.3517;5.7586;5.5397;4.9467 -;-;+;-;-;-;-;-;-;- + 229 1 1.399 104414.3 1.0 13475 5803 19260 HBL1_DMSO_200M_050219_1,19280 HBL1_DMSO_200M_050219_1,19280,LPVPPLGL True False LPPVPLGI 92.623895 805.519091784954 6500557.0 19260.0 ENSG00000015285|ENST00000376701|WAS 4.477415084838867 1.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19282 92.628 11.0 5083000.0 25 0 667530.0 + 1569 ALLDVFREA 9 58 517.2872885255881 1032.560024117976 2 517.2877075076103 MULTI CID FTMS 0 0 0 19281 5113370.5 1.0 0 0.0 1 Unmodified _ALLDVFREA_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 38.17557092003332 0.0854718145212029 3 [{I|L}A]{I|L}DV{M(Oxidation (M))|F}{[RE]|[WV]}A 9 0 + 69.184 0.0 0.0 6.7002 6.7002 94.501 0.0 0.0 0.0 39.97566695774944 8.465432533344753 8.465432533344753 69.18385449727319 0 1.2302046884880935 2.0 0.0 0.7302046884880937 + + [{I|L}A]{I|L}DV{M(Oxidation (M))|F}{[RE]|[WV]}A 6.7002 + + 120 + 1 1.399 48798.3 1.0 13476 5804 19281 HBL1_DMSO_200M_050219_1,19282 HBL1_DMSO_200M_050219_1,19282,ALLDVFREA True True ALLDVFREA 92.628141 517.28770750761 116510388.0 19281.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 7.079839865366618 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19283 92.629 24.0 2412900.0 25 0 380870.0 + 44746 YPLERGFIYV 10 69 628.8374189013878 1255.6602848695754 2 628.8375732302666 MULTI CID FTMS 0 0 0 19281 1983522.125 0.924050671979064 1 -0.1375732421875 2 Unmodified _YPLERGFIYV_ ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF 32.037481411007896 0.2488723560272515 3 YP{I|L}E 4 6 39.046 0.0 0.0 3.1096 0.0 0.0 0.0 750.3931978815061 750.3931978815061 2.1079529480126595 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + YP{I|L}E 3.1096 + + 50 + 1 1.399 49011.2 1.0 13477 5804 19281 HBL1_DMSO_200M_050219_1,19283 HBL1_DMSO_200M_050219_1,19283,YPLERGFIYV False True YPLERGFIYV 92.629318 628.837573230267 71069706.0 19281.0 ENST00000293880.9_1_11:57098199-57100416:-|nuORF;;ENSG00000149136|ENST00000278412|SSRP1 7.815228303273519 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19284 92.631 37.0 1190400.0 25 0 222390.0 + 17205 KLLEEQGIFL 10 61 595.3450803702775 1188.675607807355 2 595.3454467654228 MULTI CID FTMS 0 0 0 19281 1346783.125 0.9995409683434218 1 -0.1375732421875 3 Unmodified _KLLEEQGIFL_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 41.95555342248728 0.1369168616057562 3 {M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}K{I|L}{M(Oxidation (M))|F}{I|L} 8 6 49.245 0.0 0.0 4.1429 0.0 0.0 131.0951863019547 0.0 131.0951863019547 0.0 42.523656471886326 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.3807196863200844 {M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}K{I|L}{M(Oxidation (M))|F}{I|L} 4.1429 - 78 1 1.399 39950.9 1.0 13478 5804 19281 HBL1_DMSO_200M_050219_1,19284 HBL1_DMSO_200M_050219_1,19284,KLLEEQGIFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19285 92.632 45.0 958230.0 25 0 111960.0 + 25909 NLLAHFINA 9 93 506.7831283942306 1011.5517038552612 2 506.7826415896416 MULTI CID FTMS 0 0 0 19281 611641.25 1.0 0 0.0 4 Unmodified _NLLAHFINA_ ENSG00000137409|ENST00000373627|MTCH1;nc|ENSG00000137409|Q9NZJ7-2|MTCH1;nc|ENSG00000137409|Q9NZJ7-3|MTCH1 32.30548876998284 0.1201446275138228 3 [{I|L}A]H{M(Oxidation (M))|F}{I|L}N 6 3 31.256 0.0 0.0 3.0899 0.0 0.0 0.0 313.15227866534593 313.15227866534593 1.194672967330881 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + [{I|L}A]H{M(Oxidation (M))|F}{I|L}N 3.0899 + + 227 1 1.399 40442.4 1.0 13479 5804 19281 HBL1_DMSO_200M_050219_1,19285 HBL1_DMSO_200M_050219_1,19285,NLLAHFINA True True NLLAHFINA 92.63173 506.782641589642 4802458.0 19281.0 nc|ENSG00000137409|Q9NZJ7-2|MTCH1;;nc|ENSG00000137409|Q9NZJ7-3|MTCH1;;ENSG00000137409|ENST00000373627|MTCH1 3.9853320121765137 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19286 92.633 46.0 927150.0 25 0 125070.0 + 9883 FPFPTPPSV 9 70 494.7607669353666 987.5069809375332 2 494.7606689333916 MULTI CID FTMS 0 0 0 19281 588003.75 0.7914465764349294 -8 0.8584213256835938 5 Unmodified _FPFPTPPSV_ ENSG00000150990|ENST00000308736|DHX37 44.40701690623563 0.0526327925666318 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F} 3 6 25.062 0.0 0.0 2.5379 0.0 0.0 0.0 593.2932107561458 593.2932107561458 4.561247898759724 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F} 2.5379 + + 48 1 1.399 38975.0 1.0 13480 5804 19281 HBL1_DMSO_200M_050219_1,19286 HBL1_DMSO_200M_050219_1,19286,FPFPTPPSV True True FPFPTPPSV 92.632974 494.760668933392 89637480.0 19281.0 ENSG00000150990|ENST00000308736|DHX37 7.711145083109538 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19287 92.642 527.0 325710.0 25 0 27619.0 + -1 EPPMACFMSL 10 180 607.7467383608608 1213.4789237885216 2 607.7480346560478 MULTI CID FTMS 0 0 0 19281 325507.40625 1.0 0 0.0 6 Carbamidomethyl (C),2 Oxidation (M) _EPPM(Oxidation (M))AC(Carbamidomethyl (C))FM(Oxidation (M))SL_ REV__ENSG00000175928|ENST00000319331|LRRN1 20.453626601364224 0.5043500229302764 3 DPEQP{M(Oxidation (M))|F}{I|L} 7 -1 35.13 0.0 0.0 2.895 0.0 0.0 369.08317105416097 0.0 369.08317105416097 0.0 9.3113401226549 0.0 0.0 0 0.1505149978319906 0.0 1.174742501084005 0.5994850021680094 DPEQP{M(Oxidation (M))|F}{I|L} 2.895 - 1108 1 1.399 125653.1 1.0 13481 5804 19281 HBL1_DMSO_200M_050219_1,19287 HBL1_DMSO_200M_050219_1,19287,EPPMACFMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19288 92.645 131.0 392130.0 25 0 43994.0 -1 MISLEIPQV 9 102 523.28339215863 1044.55223138406 2 523.2839843630791 MULTI CID FTMS 0 0 0 19281 279933.15625 1.0 0 0.0 7 Oxidation (M) _M(Oxidation (M))ISLEIPQV_ ENSG00000111231|ENST00000228827|GPN3;nc|ENSG00000111231|Q9UHW5-2|GPN3;nc|ENSG00000111231|Q9UHW5-3|GPN3 30.22481116460888 0.1466181017706357 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S 3 -1 15.062 0.0 0.0 1.4419 0.0 0.0 0.0 694.3759062710318 694.3759062710318 2.2974588320797213 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S 1.4419 + + 239 1 1.399 45079.9 1.0 13482 5804 19281 HBL1_DMSO_200M_050219_1,19288 HBL1_DMSO_200M_050219_1,19288,MISLEIPQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19289 92.651 332.0 189600.0 25 0 48280.0 + 26515 NVIDNLIV 8 87 450.2646742323793 898.5147955315587 2 450.2651244997978 MULTI CID FTMS 0 0 0 19281 265538.28125 0.8832712623968626 1 -0.1375732421875 8 Unmodified _NVIDNLIV_ ENSG00000143621|ENST00000361891|ILF2 39.957323273325 0.2350051964751539 3 {[NV]|[RG]}EVN{I|L}{I|L}V 8 2 + 41.419 0.0 0.0 4.6098 4.6098 76.036 0.0 0.0 0.0 3.0102999566398125 9.731975075880328 3.0102999566398125 3.0102999566398125 0 0.6549471895720985 0.0 0.0 0.8494850021680094 {[NV]|[RG]}EVN{I|L}{I|L}V;[DN]{I|L}VN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}DVN{I|L}{I|L}V;{[NV]|[RG]}{I|L}DN{I|L}{I|L}V;{[NV]|[RG]}EVGG{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}VDN{I|L}{I|L}V;[DN]{I|L}VGG{I|L}{I|L}V;{[NV]|[RG]}E{I|L}{[NV]|[RG]}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}DVGG{I|L}{I|L}V;{[NV]|[RG]}{I|L}DGG{I|L}{I|L}V 4.6098;4.2747;4.0788;4.0788;3.5789;3.5478;3.2439;3.0553;3.0479;3.0479 -;-;-;+;-;-;-;-;-;- + 225 1 1.399 53015.3 1.0 13483 5804 19281 HBL1_DMSO_200M_050219_1,19289 HBL1_DMSO_200M_050219_1,19289,NVIDNLIV False True NVIDNLIV 92.650955 450.265124499798 2164801.0 19281.0 ENSG00000143621|ENST00000361891|ILF2 2.3364019791285195 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19290 92.658 370.0 268410.0 25 0 14967.0 + 35435 STLHLVLRL 9 118 351.2258024463099 1050.6555779391297 3 351.2259094119072 MULTI CID FTMS 0 0 0 19281 249310.859375 0.0061920304011476 24 -2.6715545654296875 9 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 25.399314129420983 0.2080152500878129 3 H{I|L}V{I|L}[R{I|L}] 6 3 26.532 0.0 0.0 2.5253 0.0 0.0 301.1634143433926 0.0 301.1634143433926 0.0 5.61726762060173 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 + H{I|L}V{I|L}[R{I|L}] 2.5253 + + 103 + 1 1.399 80726.7 1.0 13484 5804 19281 HBL1_DMSO_200M_050219_1,19290 HBL1_DMSO_200M_050219_1,19290,STLHLVLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19291 92.671 800.0 515690.0 25 0 67938.0 + 45626 YVLPKLYVKL 10 186 412.5969595568861 1234.7690492708582 3 412.5970031619072 MULTI CID FTMS 0 0 0 19281 237794.796875 0.3997554795794322 -1 0.052032470703125 10 Unmodified _YVLPKLYVKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 71.92227651296345 0.0188747003512554 3 [YV]{I|L}PK{I|L}YVK{I|L} 10 0 + 83.592 0.0 0.0 6.7698 6.7698 85.277 0.0 0.0 0.0 27.26998727936263 4.559319556497243 4.559319556497243 4.559319556497243 0 1.5044321917401078 2.0 0.0 0.6643943297944485 + + [YV]{I|L}PK{I|L}YVK{I|L};[YV]{I|L}PK{I|L}YV{I|L}K;[YV]{I|L}P{I|L}KYVK{I|L};[YV]{I|L}{I|L}PKYVK{I|L};[YV]{I|L}P{I|L}KYV{I|L}K;[YV]{I|L}PK{I|L}Y{I|L}VK;[YV]{I|L}{I|L}PKYV{I|L}K;[YV]{I|L}P{I|L}KY{I|L}VK;[YV]{I|L}{I|L}PKY{I|L}VK;[{I|L}P]K{I|L}[TP]P{I|L}{I|L}{M(Oxidation (M))|F}P 6.7698;6.4006;5.9243;5.6805;5.555;5.3526;5.3112;4.5071;4.2633;3.2337 +;-;-;-;-;-;-;-;-;- + 1127 + 1 1.399 320163.3 0.959999978542328 13485 5804 19281 HBL1_DMSO_200M_050219_1,19291 HBL1_DMSO_200M_050219_1,19291,YVLPKLYVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19292 92.682 581.0 376420.0 25 0 33887.0 + 6575 EALVMPTL 8 118 873.4749966529123 872.4677201863122 1 873.4706909060478 MULTI CID FTMS 0 0 0 19281 223021.5 0.0659161910616803 5 -0.574981689453125 11 Unmodified _EALVMPTL_ ENSG00000105568|ENST00000322088|PPP2R1A 57.47134341890925 0.1146309765603773 3 [TP]{I|L}TMP[{I|L}T] 8 3 + 43.818 0.0 0.0 5.0223 5.0223 78.692 0.0 0.0 0.0 8.392718607161171 1.7827366175690642 1.7827366175690642 3.8161514012902487 0 1.274227503252014 1.0969100130080565 0.5114393726401688 0.0 [TP]{I|L}TMP[{I|L}T];[TP]{I|L}T{[QG]|[NA]}TR;[TP]{I|L}TT{[QG]|[NA]}R;{[QN]|[E{I|L}]|[KN]}AVMP[{I|L}T];{[QN]|[E{I|L}]|[KN]}AV{[QG]|[NA]}TR;{[QN]|[E{I|L}]|[KN]}AVT{[QG]|[NA]}R;{[CP]|[EA]}{I|L}VMP[{I|L}T];[TP]{I|L}MTP[{I|L}T];{[CP]|[EA]}{I|L}V{[QG]|[NA]}TR;{[CP]|[EA]}{I|L}VT{[QG]|[NA]}R 5.0223;4.5849;4.5828;4.0603;3.6229;3.6209;3.4024;2.969;2.965;2.9629 -;-;-;-;-;-;+;-;-;- + 2409 1 1.399 145815.2 1.0 13486 5804 19281 HBL1_DMSO_200M_050219_1,19292 HBL1_DMSO_200M_050219_1,19292,EALVMPTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19293 92.692 608.0 285200.0 25 0 52367.0 -1 LTVERGPCCSL 11 161 646.3077873512005 1290.601021769201 2 646.3069335818291 MULTI CID FTMS 0 0 0 19281 249246.421875 0.9131407604478896 -3 0.3303604125976562 12 2 Carbamidomethyl (C) _LTVERGPC(Carbamidomethyl (C))C(Carbamidomethyl (C))SL_ ENST00000572050.1_3_17:79211356-79212635:-|nuORF;ENST00000576090.5_1_17:79211356-79211560:-|nuORF 18.1463463914782 0.6576820063886638 3 [DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}{I|L}S[YQ] 10 -1 + 56.041 0.0 0.0 4.3422 4.3422 74.3 0.0 0.0 0.0 8.590919918922012 2.498774732165998 2.498774732165998 2.498774732165998 0 0.0 2.0 1.2218487496163564 0.0 [DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}{I|L}S[YQ];[DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}CK{I|L};[DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}CK{I|L};[DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}KC{I|L};W{[YC]|[HE]}SE{I|L}{M(Oxidation (M))|F}CK{I|L};[DV]{M(Oxidation (M))|F}[CG]{M(Oxidation (M))|F}{I|L}{I|L}S[YQ];W{[YC]|[HE]}SE{I|L}{I|L}S[YQ];[DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}[YQ]S{I|L};[DV]{M(Oxidation (M))|F}[CG]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}CK{I|L};[VS]{M(Oxidation (M))|F}CCE{I|L}{M(Oxidation (M))|F}CK{I|L} 4.3422;4.1486;3.6821;3.6821;3.6766;3.6321;3.5752;3.4931;3.4385;3.3802 -;-;-;-;-;-;-;-;-;- 4459 + 1 1.399 132699.7 1.0 13487 5804 19281 HBL1_DMSO_200M_050219_1,19293 HBL1_DMSO_200M_050219_1,19293,LTVERGPCCSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19294 92.703 626.0 231570.0 25 0 13613.0 + 33337 SFYSGLTPTEF 11 151 624.7925602621643 1247.5705675911286 2 624.7937499880791 MULTI CID FTMS 0 0 0 19281 203225.828125 1.0 0 0.0 13 Unmodified _SFYSGLTPTEF_ ENSG00000148606|ENST00000372371|POLR3A 96.11092074494114 0.0004512120432046 3 [TP]ET[VP]M 7 9 36.985 0.0 0.0 2.9646 0.0 0.0 0.0 489.1998445180911 489.1998445180911 9.542016895949708 0.0 0.0 0.0 0 0.5 1.154901959985743 1.674742501084005 0.0 [TP]ET[VP]M 2.9646 - 2392 1 1.399 110841.9 1.0 13488 5804 19281 HBL1_DMSO_200M_050219_1,19294 HBL1_DMSO_200M_050219_1,19294,SFYSGLTPTEF True True SFYSGLTPTEF 92.70319 624.793749988079 2532348.75 19281.0 ENSG00000148606|ENST00000372371|POLR3A 7.8563551902771 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19295 92.711 353.0 409710.0 25 0 98759.0 + 27642 PLGSPLLL 8 130 405.2603300278034 808.5061071224068 2 405.2599365115166 MULTI CID FTMS 0 0 0 19281 205908.296875 0.4387567227029809 8 -0.887786865234375 14 Unmodified _PLGSPLLL_ ENST00000537708.1_1_12:6669555-6669804:-|nuORF 52.69307289633392 0.1265801145616722 3 [{I|L}P][SG]P{I|L}{I|L}{I|L} 8 0 + 51.432 0.0 0.0 6.3613 6.3613 87.898 0.0 0.0 0.0 17.659167939666318 31.984615597275404 17.659167939666318 8.979852382583928 0 0.7429928190999391 2.0 1.035666875892183 0.0 + + [{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P]KEP{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L};[PG]PS{I|L}{I|L}{I|L}{I|L};[PG]S{I|L}P{I|L}{I|L}{I|L};[PG]SP{I|L}{I|L}{I|L}{I|L};{[SA]|[TG]}P{I|L}VP{I|L}{I|L};[PG]S{I|L}{I|L}P{I|L}{I|L};[K{I|L}]PEP{I|L}{I|L} 6.3613;5.2507;4.6536;3.5987;3.5737;3.24;1.9622;1.8659;1.6946 +;-;-;-;-;-;-;-;- + 422 1 1.399 116714.6 1.0 13489 5804 19281 HBL1_DMSO_200M_050219_1,19295 HBL1_DMSO_200M_050219_1,19295,PLGSPLLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19296 92.717 336.0 358340.0 25 0 58610.0 + 40919 VLSPHGAA 8 139 376.20791551120055 750.4012780892011 2 376.2079345583916 MULTI CID FTMS 0 0 0 19281 209984.046875 1.0 0 0.0 15 Unmodified _VLSPHGAA_ REV__ENSG00000178828|ENST00000375121|RNF186 0.7936320650641473 0.8195151834710337 3 R 1 -1 11.109 0.0 0.0 1.4804 0.0 0.0 576.2890782374418 0.0 576.2890782374418 0.0 2.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.4804 - 20 + 1 1.399 97150.8 1.0 13490 5804 19281 HBL1_DMSO_200M_050219_1,19296 HBL1_DMSO_200M_050219_1,19296,VLSPHGAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19297 92.719 102.0 739260.0 25 0 47074.0 + 18304 KVLDIMPLTL 10 116 579.8420521051584 1157.6695512771166 2 579.8451415896416 MULTI CID FTMS 0 0 0 19281 210442.4375 0.1130833909820076 -3 0.3303604125976562 16 Oxidation (M) _KVLDIM(Oxidation (M))PLTL_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 51.41523569358685 0.0718446036348414 3 [{I|L}P]T{I|L}[YQ][{I|L}P]T{I|L} 10 5 + 59.454 0.0 0.0 5.1357 5.1357 73.801 0.0 0.0 0.0 8.239087409443187 16.53212513775344 8.239087409443187 0.5926340775231864 0 0.3807196863200844 2.0 0.4247425010840047 0.3494850021680094 [{I|L}P]T{I|L}[YQ][{I|L}P]T{I|L};[{I|L}P]T{I|L}N{I|L}HHT{I|L};[{I|L}P]T[YQ]{I|L}[{I|L}P]T{I|L};[{I|L}T]P{I|L}[YQ][{I|L}P]T{I|L};[{I|L}T]{I|L}Q{I|L}{M(Oxidation (M))|F}[{I|L}P]T{I|L};[{I|L}T]P{I|L}N{I|L}HHT{I|L};[{I|L}P]T{I|L}GG{I|L}HHT{I|L};[{I|L}P]T{I|L}HH{[QV]|[N{I|L}]|[RA]|[KV]}T{I|L};[{I|L}T]P[YQ]{I|L}[{I|L}P]T{I|L};[{I|L}T]{I|L}Q{M(Oxidation (M))|F}{I|L}[{I|L}P]T{I|L} 5.1357;5.0845;4.6156;4.424;4.3976;4.3728;4.2929;3.9849;3.9039;3.8775 -;-;-;-;-;-;-;-;-;- 1063 1 1.399 65069.9 1.0 13491 5804 19281 HBL1_DMSO_200M_050219_1,19297 HBL1_DMSO_200M_050219_1,19297,KVLDIMPLTL True False KVLDIMPLTL 92.719303 579.845141589642 35064984.0 19281.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 6.961838086446126 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19298 92.733 780.0 266330.0 25 0 22222.0 + 10761 FYLGIPAHPM 10 154 573.2959635324083 1144.5773741316166 2 573.2960082888603 MULTI CID FTMS 0 0 0 19281 191113.125 1.0 0 0.0 17 Unmodified _FYLGIPAHPM_ REV__ENSG00000276023|ENST00000617516|DUSP14 32.116972079565 0.2470863257317063 3 {M(Oxidation (M))|F}Y{I|L}VSRVMM 9 -1 + 59.288 0.0 0.0 5.1799 5.1799 81.437 0.0 0.0 0.0 5.938265792396251 5.938265792396251 5.938265792396251 5.938265792396251 0 2.3424778212679485 0.0 0.0 0.0 {M(Oxidation (M))|F}Y{I|L}VSRVMM;[Y{I|L}]{M(Oxidation (M))|F}V[QA]{I|L}YE;{M(Oxidation (M))|F}Y{I|L}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KT]M;[{I|L}V][Y{M(Oxidation (M))|F}][QA]{I|L}YE;[Y{M(Oxidation (M))|F}]K[PS]V{I|L}YE;{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}{[YC]|[HE]}{I|L}YE;{[TV]|[{I|L}S]}[HT][PS]V{I|L}YE;[Y{M(Oxidation (M))|F}]{I|L}V[QA]{I|L}YE;[VS]R{I|L}{[YC]|[HE]}{I|L}YE;{[TV]|[{I|L}S]}[RV]{[YC]|[HE]}{I|L}YE 5.1799;4.6611;3.9859;3.6381;3.5914;3.5458;3.3344;3.2225;3.1622;3.0752 -;-;-;-;-;-;-;-;-;- 761 + 1 1.399 157387.2 1.0 13492 5804 19281 HBL1_DMSO_200M_050219_1,19298 HBL1_DMSO_200M_050219_1,19298,FYLGIPAHPM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19299 92.748 800.0 151560.0 25 0 10274.0 + 5501 DLTLYMFTS 9 110 1090.5097855176814 1089.5025090510817 1 1093.526049792767 MULTI CID FTMS 0 0 0 19281 176290.921875 1.0 0 0.0 18 Unmodified _DLTLYMFTS_ REV__ENSG00000168883|ENST00000323701|USP39;REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF;REV__ENST00000493829.5_1_2:85843459-85872221:+|nuORF;REV__nc|ENSG00000168883|Q53GS9-2|USP39;REV__nc|ENSG00000168883|Q53GS9-3|USP39 15.847184025352805 0.4077185912009129 3 PPPPYY 6 -1 17.0 0.0 0.0 1.5603 0.0 0.0 357.1664295880875 0.0 357.1664295880875 0.0 3.4429854649541305 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPPYY 1.5603 - 2064 1 1.399 81496.2 0.75 13493 5804 19281 HBL1_DMSO_200M_050219_1,19299 HBL1_DMSO_200M_050219_1,19299,DLTLYMFTS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19300 92.755 403.0 399190.0 25 0 36160.0 + 17168 KLIPQLPTL 9 150 511.83389419061535 1021.6532354480308 2 511.8338500857353 MULTI CID FTMS 0 0 0 19281 168308.59375 0.8338674791876648 -1 0.052032470703125 19 Unmodified _KLIPQLPTL_ ENSG00000025039|ENST00000369415|RRAGD;ENSG00000116954|ENST00000373001|RRAGC;ENST00000496778.1_1_1:39317285-39318153:-|nuORF;nc|ENSG00000025039|Q9NQL2-2|RRAGD 53.832793166522166 0.0319663582346103 3 [QP]{I|L}K{I|L}{I|L}PT{I|L} 9 4 + 55.775 0.0 0.0 5.4593 5.4593 81.033 0.0 0.0 0.0 7.239722733060745 18.34482980557111 7.239722733060745 4.520534381044499 0 1.3684151806525389 0.5686362358410126 0.0 0.2302046884880938 [QP]{I|L}K{I|L}{I|L}PT{I|L};[QP]{I|L}{I|L}K{I|L}PT{I|L};[{I|L}P]QK{I|L}{I|L}PT{I|L};[AG]P{I|L}K{I|L}{I|L}PT{I|L};[VP]AAK{I|L}{I|L}PT{I|L};[QP]K{I|L}{I|L}{I|L}PT{I|L};[{I|L}P]Q{I|L}K{I|L}PT{I|L};[AG]P{I|L}{I|L}K{I|L}PT{I|L};{[VA]|[{I|L}G]}APK{I|L}{I|L}PT{I|L};[VP]AA{I|L}K{I|L}PT{I|L} 5.4593;5.0168;4.7507;4.6907;4.5132;4.4805;4.3082;4.2482;4.1679;4.0708 -;-;-;-;-;-;-;-;-;- 1231 1 1.399 131110.8 1.0 13494 5804 19281 HBL1_DMSO_200M_050219_1,19300 HBL1_DMSO_200M_050219_1,19300,KLIPQLPTL True True KLIPQLPTL 92.75505 511.833850085735 5328436.5 19281.0 ENST00000496778.1_1_1:39317285-39318153:-|nuORF;;ENSG00000025039|ENST00000369415|RRAGD;;nc|ENSG00000025039|Q9NQL2-2|RRAGD;;ENSG00000116954|ENST00000373001|RRAGC 4.622426668802897 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19301 92.761 344.0 267040.0 25 0 36257.0 + 44237 YLIDEPSAYL 10 125 592.2985177461876 1182.582482559175 2 592.2997924685478 MULTI CID FTMS 0 0 0 19281 160473.46875 0.9681928311906924 -2 0.21258544921875 20 Unmodified _YLIDEPSAYL_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000510321.1_1_4:146044244-146044510:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 34.10243960390752 0.2198439752719791 3 [Y{I|L}]N[NS][PS]{I|L}Y{I|L} 10 4 + 32.883 0.0 0.0 2.7806 2.7806 72.395 0.0 0.0 0.0 7.793774815719207 7.626656038284455 7.626656038284455 3.521825181113627 0 1.0629529932484498 1.6989700043360187 0.6109243748081782 0.0 [Y{I|L}]N[NS][PS]{I|L}Y{I|L};[Y{I|L}][WE][PS]{I|L}Y{I|L};[Y{I|L}]N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[PS][NS]C(Carbamidomethyl (C))V{I|L};[Y{I|L}]N{I|L}QQEY{I|L};[Y{I|L}][WE][KA]Y[NP];[Y{I|L}]N{I|L}{[WT]|[RM]}Y[NP];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}C(Carbamidomethyl (C))V{I|L};[QT]Y[KA][NS]C(Carbamidomethyl (C))V{I|L};[Y{I|L}]N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]{I|L}Y{I|L} 2.7806;2.4828;2.3304;2.1215;2.0995;1.7871;1.7403;1.6713;1.6578;1.5517 -;-;-;-;-;-;-;-;-;- 1071 1 1.399 72644.2 1.0 13495 5804 19281 HBL1_DMSO_200M_050219_1,19301 HBL1_DMSO_200M_050219_1,19301,YLIDEPSAYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19303 92.766 2.5 19279000.0 25 0 3379600.0 + 24787 MPIKINLI 8 72 471.2962775002167 940.5780020672336 2 471.2968627810478 MULTI CID FTMS 0 0 0 19302 19891804.0 0.4300451175648397 2 -0.2129135131835937 1 Unmodified _MPIKINLI_ ENSG00000134001|ENST00000256383|EIF2S1 40.44857923139169 0.2267865117615937 3 [{I|L}P]K{I|L}NM{I|L}{I|L} 8 2 + 48.835 0.0 0.0 5.192 5.192 83.117 0.0 0.0 0.0 7.645680359949551 7.346368802282015 7.346368802282015 7.645680359949551 0 0.7742275032520141 2.0 0.0 0.0 [{I|L}P]K{I|L}NM{I|L}{I|L};MP{I|L}[R{I|L}]RR;[{I|L}P]K{I|L}GGM{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KPM{I|L}{I|L};[K{I|L}]P{I|L}NM{I|L}{I|L};[K{I|L}]P{I|L}GGM{I|L}{I|L};[K{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}PM{I|L}{I|L} 5.192;4.3791;4.2073;3.5023;2.6128;1.628;1.5313 -;-;-;-;-;-;- 208 1 1.405 42597.5 1.0 13496 5805 19302 HBL1_DMSO_200M_050219_1,19303 HBL1_DMSO_200M_050219_1,19303,MPIKINLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19304 92.767 5.7 13194000.0 25 0 2219000.0 + 4514 DAYLPLRL 8 67 480.7794978968272 959.5444428604544 2 480.7801086306572 MULTI CID FTMS 0 0 0 19302 6602596.0 0.1587426256978082 4 -0.437408447265625 2 Unmodified _DAYLPLRL_ ENSG00000062822|ENST00000440232|POLD1 34.10243960390752 0.3329570729325616 3 {[DA]|[EG]}Y{I|L}{I|L}P[R{I|L}] 8 2 + 57.95 0.0 0.0 6.0394 6.0394 80.834 0.0 0.0 0.0 41.13544593554487 10.24227503252014 10.24227503252014 3.0102999566398125 0 0.8807196863200843 1.6989700043360187 0.0 0.6747425010840047 {[DA]|[EG]}Y{I|L}{I|L}P[R{I|L}];{[DA]|[EG]}Y{I|L}P{I|L}[R{I|L}] 6.0394;5.7256 -;+ + 70 + 1 1.405 63851.1 1.0 13497 5805 19302 HBL1_DMSO_200M_050219_1,19304 HBL1_DMSO_200M_050219_1,19304,DAYLPLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19305 92.768 46.0 2891400.0 25 0 662700.0 + 11731 GLIEILKKV 9 83 338.2303843860517 1011.6693237583552 3 338.2301208376884 MULTI CID FTMS 0 0 0 19302 1308409.25 0.2072604235581709 -2 0.189605712890625 3 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 29.081581746732265 0.1611639662936252 3 {[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KKV 9 0 + 72.019 0.0 0.0 7.1188 7.1188 80.16 0.0 0.0 0.0 27.147642715192504 0.6694678963061165 0.6694678963061165 0.6694678963061165 0 0.3494850021680094 2.0 0.4247425010840047 0.2215141619232908 + + {[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KKV;{[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KVK;{[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}VKK;{[VA]|[{I|L}G]}{I|L}EV{I|L}{I|L}KK;{[VA]|[{I|L}G]}{I|L}VE{I|L}{I|L}KK;{[VA]|[{I|L}G]}V{I|L}E{I|L}{I|L}KK 7.1188;7.0526;6.2759;4.1249;4.0732;3.1817 +;-;-;-;-;- + 492 + 1 1.405 110788.0 1.0 13498 5805 19302 HBL1_DMSO_200M_050219_1,19305 HBL1_DMSO_200M_050219_1,19305,GLIEILKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19306 92.77 57.0 2529200.0 25 0 352770.0 + 11734 GLIEILKKV 9 121 506.8419687512129 1011.6693845692256 2 506.8420287966728 MULTI CID FTMS 0 0 0 19302 1060064.875 0.1472779320164991 -2 0.189605712890625 4 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 65.23502041540118 0.0231836506122253 3 VA{I|L}E{I|L}{I|L}KKV 9 2 + 99.747 0.0 0.0 9.8597 9.8597 99.611 0.0 0.0 0.0 67.65871564380276 12.98332479720628 12.98332479720628 90.38409621421891 0 1.579689690656103 2.0 0.3494850021680094 0.1861818737241735 VA{I|L}E{I|L}{I|L}KKV;[KA]RGAK{I|L}[R{I|L}];[KA]R[KQ]{I|L}[R{I|L}] 9.8597;0.92551;0.63138 -;-;- 1655 + 1 1.405 112750.5 1.0 13499 5805 19302 HBL1_DMSO_200M_050219_1,19306 HBL1_DMSO_200M_050219_1,19306,GLIEILKKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19307 92.771 37.0 459870.0 25 0 39636.0 + 22819 LRHAWVYL 8 47 529.3002944283521 1056.586035923504 2 529.3002197146416 MULTI CID FTMS 0 0 0 19302 1024113.1875 0.4516377390267797 6 -0.6623916625976562 5 Unmodified _LRHAWVYL_ ENST00000494187.1_1_7:30821643-30825836:+|nuORF 9.347437153973935 0.7675937258251505 3 Y{I|L} 2 6 17.518 0.0 0.0 1.658 0.0 0.0 762.4281817748698 0.0 762.4281817748698 0.0 7.060544824331243 0.0 0.0 0 0.5 0.0 0.0 0.0 + Y{I|L} 1.658 + + 5 + 1 1.405 19552.8 1.0 13500 5805 19302 HBL1_DMSO_200M_050219_1,19307 HBL1_DMSO_200M_050219_1,19307,LRHAWVYL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19308 92.772 68.0 761540.0 25 0 58595.0 19037 LDLQILEKL 9 93 542.834275736372 1083.653998539544 2 542.8347656130791 MULTI CID FTMS 0 0 0 19302 680242.0 0.3361860473736314 -2 0.189605712890625 6 Unmodified _LDLQILEKL_ ENSG00000163006|ENST00000295124|CCDC138 34.40172386719151 0.1061884637610825 3 [Q{I|L}]VE{I|L}{I|L}EK{I|L} 9 3 + 70.372 0.0 0.0 6.4939 6.4939 93.835 0.0 0.0 0.0 43.99674684468792 12.09614293199344 12.09614293199344 70.37192209717617 0 0.2742275032520141 2.0 0.3807196863200844 0.0 [Q{I|L}]VE{I|L}{I|L}EK{I|L} 6.4939 - 179 + 1 1.405 48529.5 1.0 13501 5805 19302 HBL1_DMSO_200M_050219_1,19308 HBL1_DMSO_200M_050219_1,19308,LDLQILEKL True True QIVELIEKI 92.77239 542.834765613079 32303674.0 19302.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 3.7374026775360103 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19309 92.775 132.0 311190.0 25 0 64515.0 + 22833 LRRHKRKCYVL 11 66 491.29928255110246 1470.8760182535077 3 491.2995483279228 MULTI CID FTMS 0 0 0 19302 525965.25 0.6357111200064844 1 -0.1290817260742187 7 Unmodified _LRRHKRKCYVL_ REV__ENSG00000046889|ENST00000288368|PREX2;REV__ENST00000517617.1_1_8:68864752-69023167:+|nuORF;REV__ENST00000529398.5_1_8:68864629-69017594:+|nuORF;REV__nc|ENSG00000046889|Q70Z35-3|PREX2;REV__nc|ENSG00000046889|Q70Z35-4|PREX2 0.5059551277355931 0.8727608062196215 3 {I|L} 1 -1 11.99 0.0 0.0 0.81514 0.0 0.0 1339.7810913509668 0.0 1339.7810913509668 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.81514 + + 26 + 1 1.405 42398.2 1.0 13502 5805 19302 HBL1_DMSO_200M_050219_1,19309 HBL1_DMSO_200M_050219_1,19309,LRRHKRKCYVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19310 92.778 118.0 472680.0 25 0 83613.0 + 22241 LPRIFTSI 8 87 473.78907192202655 945.5635909108532 2 473.7891418337822 MULTI CID FTMS 0 0 0 19302 351468.4375 0.7341943745268075 -2 0.189605712890625 8 Unmodified _LPRIFTSI_ ENSG00000167085|ENST00000300408|PHB1;ENST00000355202.8_1_19:38187835-38188303:-|nuORF;ENST00000393345.8_1_17:47486298-47490626:-|nuORF;nc|ENSG00000167085|P35232-2|PHB1 52.268347100219714 0.1285778651304833 3 {I|L}{M(Oxidation (M))|F}TS{I|L} 5 3 36.063 0.0 0.0 3.8139 0.0 0.0 366.2383900373063 0.0 366.2383900373063 0.0 19.86494082808356 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 + {I|L}{M(Oxidation (M))|F}TS{I|L} 3.8139 + + 90 1 1.405 48387.4 1.0 13503 5805 19302 HBL1_DMSO_200M_050219_1,19310 HBL1_DMSO_200M_050219_1,19310,LPRIFTSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19311 92.791 800.0 367230.0 25 0 27360.0 + 41446 VPLLVKVI 8 153 440.8151375438941 879.6157221545883 2 440.8150512576103 MULTI CID FTMS 0 0 0 19302 324926.40625 0.545317093468695 1 -0.1290817260742187 9 Unmodified _VPLLVKVI_ ENSG00000137040|ENST00000259569|RANBP6 81.86404211737425 0.0837039284849515 3 VP{I|L}{I|L}VKV{I|L} 8 0 + 81.246 0.0 0.0 9.2366 9.2366 93.526 0.0 0.0 0.0 21.15479093331686 12.50443988338705 12.50443988338705 8.891208547781773 0 2.321333751784365 1.3979400086720375 0.0 0.0 + + VP{I|L}{I|L}VKV{I|L};V{I|L}P{I|L}VKV{I|L};VP{I|L}{I|L}VK{I|L}V;[{I|L}P]V{I|L}VKV{I|L};V{I|L}P{I|L}VK{I|L}V;[{I|L}P]{I|L}VVKV{I|L};[{I|L}P]V{I|L}KVV{I|L};[VP]{I|L}{I|L}VKV{I|L};[{I|L}P]{I|L}VKVV{I|L};[{I|L}V]KV{I|L}PV{I|L} 9.2366;8.2258;7.815;6.8316;6.8042;6.6054;6.4052;6.2878;6.179;6.1105 +;-;-;-;-;-;-;+;-;- + 612 + 1 1.405 226782.8 1.0 13504 5805 19302 HBL1_DMSO_200M_050219_1,19311 HBL1_DMSO_200M_050219_1,19311,VPLLVKVI True True VPLLVKVI 92.791338 440.81505125761 12199397.0 19302.0 ENSG00000137040|ENST00000259569|RANBP6 6.099344730377197 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19312 92.794 131.0 718870.0 25 0 107930.0 + 35821 SVLAQLLVSL 10 126 521.8295101649311 1041.644467396662 2 521.8303100466728 MULTI CID FTMS 0 0 0 19302 316649.3125 1.0 0 0.0 10 Unmodified _SVLAQLLVSL_ ENSG00000135917|ENST00000644224|SLC19A3 79.59630418116434 0.0173986606250113 3 [VS]{I|L}A{I|L}Q[VS]{I|L}{I|L} 10 3 + 78.458 0.0 0.0 7.5321 7.5321 82.988 0.0 0.0 0.0 1.7363581161574049 1.2363520822298 1.2363520822298 1.7363581161574049 0 1.579689690656103 2.0 1.2753187046026266 0.3252574989159953 [VS]{I|L}A{I|L}Q[VS]{I|L}{I|L};[VS]{I|L}E{I|L}KQ{I|L}{I|L};[VS]{I|L}A{I|L}[VS]Q{I|L}{I|L};[VS]{I|L}AQ{I|L}[VS]{I|L}{I|L};[VS]{I|L}A{I|L}[AG][VS]{I|L}{I|L};[VS]{I|L}A{I|L}{I|L}[NS]{I|L}{I|L};[VS]{I|L}A{I|L}[VS][AG]{I|L}{I|L};[VS]{I|L}A[AG]{I|L}[VS]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}Q[VS]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}QAR[KG] 7.5321;7.3654;6.8544;6.7415;6.3401;6.1073;5.9746;5.2562;5.1884;5.1547 -;-;-;-;-;-;-;-;-;- 1739 1 1.405 76269.2 1.0 13505 5805 19302 HBL1_DMSO_200M_050219_1,19312 HBL1_DMSO_200M_050219_1,19312,SVLAQLLVSL True False SVLEKLQIL 92.794017 521.830310046673 3501005.25 19302.0 nc|ENSG00000152133|Q8N954-2|GPATCH11;;ENSG00000152133|ENST00000674370|GPATCH11;;nc|ENSG00000152133|Q8N954|GPATCH11 2.7013649940490723 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19313 92.797 165.0 556130.0 25 0 65814.0 + 12641 GVLDPRLLVGC 11 115 571.3237399927127 1140.632927052225 2 571.3241454958916 MULTI CID FTMS 0 0 0 19302 280550.15625 0.5306987691479375 -2 0.189605712890625 11 Unmodified _GVLDPRLLVGC_ ENSG00000120942|ENST00000376810|UBIAD1;nc|ENSG00000120942|Q9Y5Z9-2|UBIAD1 43.9818466556824 0.1510575460884947 3 [VG]{I|L}{I|L}PRD{I|L}VC(Carbamidomethyl (C)) 10 3 + 84.59 0.0 0.0 7.416 7.416 82.856 0.0 0.0 0.0 16.276362525516532 56.26532548146777 16.276362525516532 1.7609125905568137 0 1.548455006504028 1.6989700043360187 0.0 0.0 [VG]{I|L}{I|L}PRD{I|L}VC(Carbamidomethyl (C));[VG]{I|L}{I|L}PVERVC(Carbamidomethyl (C));[{I|L}V]G{I|L}PRD{I|L}VC(Carbamidomethyl (C));[{I|L}V]G{I|L}PVERVC(Carbamidomethyl (C));{[VA]|[{I|L}G]}V{I|L}PRD{I|L}VC(Carbamidomethyl (C));{[VA]|[{I|L}G]}V{I|L}PVERVC(Carbamidomethyl (C));[{I|L}V]AVPRD{I|L}VC(Carbamidomethyl (C));[{I|L}V]AVPVERVC(Carbamidomethyl (C));{[VA]|[{I|L}G]}{I|L}VPRD{I|L}VC(Carbamidomethyl (C));[VG]{I|L}{I|L}PVG{[CT]|[{M(Oxidation (M))|F}G]}[WP] 7.416;7.2617;5.8105;5.6562;5.5542;5.3998;4.756;4.6016;4.4996;4.4654 -;-;-;-;-;-;-;-;-;- 1104 1 1.405 75084.3 1.0 13506 5805 19302 HBL1_DMSO_200M_050219_1,19313 HBL1_DMSO_200M_050219_1,19313,GVLDPRLLVGC False True GVLDPRLLVGC 92.797273 571.324145495892 10853649.0 19302.0 ENSG00000120942|ENST00000376810|UBIAD1;;nc|ENSG00000120942|Q9Y5Z9-2|UBIAD1 3.633243560791016 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19314 92.8 105.0 270010.0 25 0 26200.0 + -1 TVRVLECCV 9 55 568.2846968350573 1134.5548407369145 2 568.2852050662041 MULTI CID FTMS 0 0 0 19302 287696.0 0.3794036787799437 -2 0.189605712890625 12 2 Carbamidomethyl (C) _TVRVLEC(Carbamidomethyl (C))C(Carbamidomethyl (C))V_ REV__ENSG00000086102|ENST00000379540|NFX1;REV__ENST00000379521.8_2_9:33290558-33364805:+|nuORF;REV__nc|ENSG00000086102|Q12986-2|NFX1;REV__nc|ENSG00000086102|Q12986-3|NFX1 10.073929032068715 0.563993802247229 3 {[TV]|[{I|L}S]}[RV]{I|L} 5 -1 24.265 0.0 0.0 2.1387 0.0 0.0 0.0 563.1615661609957 563.1615661609957 13.005711903838597 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3807196863200844 {[TV]|[{I|L}S]}[RV]{I|L} 2.1387 + + 18 1 1.405 31438.3 1.0 13507 5805 19302 HBL1_DMSO_200M_050219_1,19314 HBL1_DMSO_200M_050219_1,19314,TVRVLECCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19315 92.802 136.0 383650.0 25 0 51502.0 + 26714 NYQVQFVTL 9 91 556.292822302331 1110.571091671462 2 556.2933837771416 MULTI CID FTMS 0 0 0 19302 288289.84375 0.3869452953258821 -2 0.189605712890625 13 Unmodified _NYQVQFVTL_ ENSG00000125484|ENST00000372146|GTF3C4 57.47134341890925 0.0274820932774257 3 [YN]QVQ{M(Oxidation (M))|F} 6 3 49.411 0.0 0.0 4.4492 0.0 0.0 0.0 328.1890475642933 328.1890475642933 29.61274510003564 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 1.0994850021680094 + [YN]QVQ{M(Oxidation (M))|F} 4.4492 + + 549 1 1.405 46752.8 1.0 13508 5805 19302 HBL1_DMSO_200M_050219_1,19315 HBL1_DMSO_200M_050219_1,19315,NYQVQFVTL True True NYQVQFVTL 92.802294 556.293383777142 12334791.0 19302.0 ENSG00000125484|ENST00000372146|GTF3C4 6.767690340677897 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19316 92.805 132.0 500620.0 25 0 56406.0 + 44375 YLSSRSPTL 9 97 512.2791580445313 1022.5437631558626 2 512.2794677615166 MULTI CID FTMS 0 0 0 19302 268499.53125 0.0275018853164258 -7 0.7614212036132812 14 Unmodified _YLSSRSPTL_ REV__ENSG00000172171|ENST00000581216|TEFM;REV__nc|ENSG00000172171|Q96QE5-4|TEFM 24.67388899826682 0.2172451872415813 3 [VP]NA{I|L}Y{I|L}S{M(Oxidation (M))|F} 9 -1 [VP]NA{I|L}Y{I|L} + + 23.856 29.562 3.8371 2.333 2.333 49.176 0.0 0.0 0.0 0.0 -12.853350071374624 -12.853350071374624 0.0 0 0.0 0.0 0.2887254899964357 0.0 [VP]NA{I|L}Y{I|L}S{M(Oxidation (M))|F} 2.333 - 375 + 1 1.405 56099.0 1.0 13509 5805 19302 HBL1_DMSO_200M_050219_1,19316 HBL1_DMSO_200M_050219_1,19316,YLSSRSPTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19317 92.819 800.0 203160.0 25 0 13741.0 -1 0 141 659.344430699552 1975.011462698856 3 659.6786987185478 MULTI CID FTMS 0 0 0 19302 219478.703125 0.8669028704255605 -2 0.189605712890625 15 3 [TA]{I|L}D{I|L}V{I|L}CCQSTT{I|L} 14 -1 69.152 0.0 0.0 3.5014 0.0 0.0 0.0 510.256325518917 510.256325518917 18.931528753421567 0.0 0.0 0.0 0 0.75 2.0 0.7742275032520141 0.0 [TA]{I|L}D{I|L}V{I|L}CCQSTT{I|L} 3.5014 - 18870 1 1.405 122254.8 0.9700000286102296 13510 5805 19302 HBL1_DMSO_200M_050219_1,19317 HBL1_DMSO_200M_050219_1,19317, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19318 92.833 800.0 221260.0 25 0 14902.0 -1 0 140 655.5757439414184 2618.273869899273 4 655.8260986208916 MULTI CID FTMS 0 0 0 19302 218842.578125 0.3545913316816367 1 -0.1290817260742187 16 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 41.777 0.0 0.0 1.5956 0.0 0.0 0.0 1676.7313954236304 1676.7313954236304 25.974829138863072 0.0 0.0 0.0 0 1.5 0.8860566476931632 0.25 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.5956 - 1781 1 1.405 132503.7 0.959999978542328 13511 5805 19302 HBL1_DMSO_200M_050219_1,19318 HBL1_DMSO_200M_050219_1,19318, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19319 92.848 800.0 464030.0 25 0 38625.0 + 45628 YVLPKLYVKL 10 160 618.3917148592722 1234.7688767853442 2 618.3918945193291 MULTI CID FTMS 0 0 0 19302 167012.953125 0.6076484430614237 -1 0.1375732421875 17 Unmodified _YVLPKLYVKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 92.65332237495696 0.0091434457392194 3 YV{I|L}PK{I|L}YVK{I|L} 10 0 + 91.61 0.0 0.0 7.4192 7.4192 88.185 0.0 0.0 0.0 19.151603310239903 5.563025007672877 5.563025007672877 5.563025007672877 0 2.7302046884880937 2.0 0.0 0.5994850021680094 + + YV{I|L}PK{I|L}YVK{I|L};YV{I|L}PK{I|L}YV{I|L}K;YV{I|L}{I|L}KPYVK{I|L};YV{I|L}{I|L}KPYV{I|L}K;{I|L}VYPK{I|L}YVK{I|L};YV{I|L}{I|L}K[{I|L}V]{M(Oxidation (M))|F}K{I|L};YV{I|L}PK{I|L}Y[K{I|L}]V;{I|L}VYPK{I|L}YV{I|L}K;YV{I|L}{I|L}K[{I|L}V]{M(Oxidation (M))|F}{I|L}K;{I|L}VY{I|L}KPYVK{I|L} 7.4192;6.9687;6.692;6.2415;5.6925;5.6151;5.3589;5.242;5.1646;4.9653 +;-;-;-;-;-;-;-;-;- + 3627 + 1 1.405 271663.2 0.8600000143051147 13512 5805 19302 HBL1_DMSO_200M_050219_1,19319 HBL1_DMSO_200M_050219_1,19319,YVLPKLYVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19320 92.862 800.0 171480.0 25 0 41024.0 -1 EKEMWHRMFAP 11 153 739.338369110038 1476.662185286876 2 739.3381835818291 MULTI CID FTMS 0 0 0 19302 157125.609375 0.5428558056195075 -2 0.189605712890625 18 Oxidation (M) _EKEM(Oxidation (M))WHRMFAP_ ENSG00000077800|ENST00000252037|FKBP6;nc|ENSG00000077800|O75344-2|FKBP6;nc|ENSG00000077800|O75344-3|FKBP6 8.155526934196011 0.8366696279279818 3 [DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]W{M(Oxidation (M))|F}{I|L}{I|L}SYQ 11 -1 + 75.968 0.0 0.0 5.1446 5.1446 78.667 0.0 0.0 0.0 41.28729185527992 7.408753817824447 7.408753817824447 3.507019175322569 0 0.25 2.0 1.4361818737241734 0.1595680409956017 [DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]W{M(Oxidation (M))|F}{I|L}{I|L}SYQ;[DV]TCC[VS]{M(Oxidation (M))|F}{I|L}{I|L}SYQ;[VS]ECC[VS]{M(Oxidation (M))|F}{I|L}{I|L}SYQ;W{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))M]{[ET]|[MV]}{I|L}SYQ;[DP]PS{I|L}{I|L}{M(Oxidation (M))|F}[VS]CCE[PA];W{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M]{[ET]|[MV]}{I|L}SYQ;[DV]T[YC(Carbamidomethyl (C))]V{[ET]|[MV]}{I|L}SYQ;W{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))M]Q[KS]SYQ;[DV]{M(Oxidation (M))|F}[YN]V{[ET]|[MV]}{I|L}SYQ;[DV]T[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}S{I|L}{I|L}SC(Carbamidomethyl (C)){I|L} 5.1446;4.9071;4.3529;4.0259;3.4931;3.4835;3.2665;3.2411;3.0125;2.8453 -;-;-;-;-;-;-;-;-;- 2717 + 1 1.405 99212.0 0.8799999952316284 13513 5805 19302 HBL1_DMSO_200M_050219_1,19320 HBL1_DMSO_200M_050219_1,19320,EKEMWHRMFAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19321 92.875 800.0 194680.0 25 0 35123.0 17798 KQKLYHKKIFR 11 168 496.9747742610208 1487.9024933832625 3 497.3095580935478 MULTI CID FTMS 0 0 0 19302 132444.71875 0.8296958952455418 1 -0.1290817260742187 19 Unmodified _KQKLYHKKIFR_ ENSG00000169180|ENST00000304658|XPO6;nc|ENSG00000169180|Q96QU8-2|XPO6 1.214830529360525 0.8694162858786273 3 [MD]A 3 11 21.427 0.0 0.0 1.4401 0.0 0.0 0.0 1167.7748132897657 1167.7748132897657 4.874212113594748 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [MD]A 1.4401 - 774 1 1.405 124778.4 0.6600000262260437 13514 5805 19302 HBL1_DMSO_200M_050219_1,19321 HBL1_DMSO_200M_050219_1,19321,KQKLYHKKIFR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19322 92.89 800.0 188680.0 25 0 17980.0 + 15313 IPLGGVYL 8 147 416.2511883373696 830.4878237415393 2 416.2511169314384 MULTI CID FTMS 0 0 0 19302 99158.9453125 0.3481386335277247 5 -0.5550918579101562 20 Unmodified _IPLGGVYL_ REV__ENSG00000196569|ENST00000421865|LAMA2 32.45364647766026 0.3613649037604678 3 {I|L}P{I|L}N{I|L}YV 7 -1 + 56.151 0.0 0.0 6.7612 6.7612 85.842 0.0 0.0 0.0 36.32023214705405 4.948500216800937 4.948500216800937 4.948500216800937 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P{I|L}N{I|L}YV;{I|L}P{I|L}N[YV]{I|L};{I|L}P{I|L}GG{I|L}YV;{I|L}P{I|L}GG[YV]{I|L};{I|L}P{[CT]|[{M(Oxidation (M))|F}G]}[TA]{I|L}{I|L};{I|L}P{[CT]|[{M(Oxidation (M))|F}G]}VVS{I|L};{I|L}{I|L}PN{I|L}YV;{I|L}P{[CT]|[{M(Oxidation (M))|F}G]}VVTV;{I|L}{I|L}PN[YV]{I|L};{I|L}P{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}[TA] 6.7612;6.1654;5.6377;5.0419;3.6873;3.665;3.267;2.728;2.6712;2.3561 -;-;-;+;-;-;-;-;-;- + 174 + 1 1.405 118012.4 0.5 13515 5805 19302 HBL1_DMSO_200M_050219_1,19322 HBL1_DMSO_200M_050219_1,19322,IPLGGVYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19324 92.895 10.0 6367300.0 25 0 1021100.0 + 40514 VIVELIYKV 9 68 538.3418222707057 1074.6690916082114 2 538.3419067263603 MULTI CID FTMS 0 0 0 19323 5336892.0 1.0 0 0.0 1 Unmodified _VIVELIYKV_ ENSG00000129083|ENST00000439561|COPB1 34.221707139014875 0.1071766711162635 3 V{I|L}VE{I|L}{I|L}YKV 9 0 + 90.856 0.0 0.0 8.4543 8.4543 97.339 0.0 0.0 0.0 53.23145724778165 7.280156171532184 7.280156171532184 29.50318762307696 0 1.1237125054200234 2.0 0.4247425010840047 0.0 + + V{I|L}VE{I|L}{I|L}YKV;V{I|L}{I|L}{I|L}D{I|L}YKV 8.4543;5.709 +;- + 232 + 1 1.407 56690.6 1.0 13516 5806 19323 HBL1_DMSO_200M_050219_1,19324 HBL1_DMSO_200M_050219_1,19324,VIVELIYKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19325 92.896 25.0 1986600.0 25 0 182800.0 + 29286 QIFNGTFVKL 10 82 583.8322092769051 1165.6498656206102 2 583.8324462771416 MULTI CID FTMS 0 0 0 19323 1813616.875 0.1027720586701954 4 -0.4260101318359375 2 Unmodified _QIFNGTFVKL_ ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF 23.78978130925829 0.4341852049148378 3 [Q{I|L}]{M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L} 10 0 + 48.95 0.0 0.0 4.1994 4.1994 81.146 0.0 0.0 0.0 22.69077524932108 10.801484959362242 10.801484959362242 9.164539485499247 0 0.3054621874040891 1.6989700043360187 0.0 0.2742275032520141 + + [Q{I|L}]{M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L};[Q{I|L}]{M(Oxidation (M))|F}GG{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L} 4.1994;3.4131 +;- + 112 + 1 1.407 44556.4 1.0 13517 5806 19323 HBL1_DMSO_200M_050219_1,19325 HBL1_DMSO_200M_050219_1,19325,QIFNGTFVKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19326 92.897 29.0 2660300.0 25 0 677170.0 7427 EGLRLNLL 8 102 464.2848377219146 926.5551225106292 2 464.2851135134697 MULTI CID FTMS 0 0 0 19323 1863190.75 0.8110186034192056 -1 0.1290817260742187 3 Unmodified _EGLRLNLL_ ENST00000526748.1_1_14:75536435-75544319:+|nuORF 47.74868867922204 0.1498366402366518 3 {[DA]|[EG]}{I|L}R{I|L}N{I|L}{I|L} 8 0 + 68.097 0.0 0.0 7.3495 7.3495 92.371 0.0 0.0 0.0 22.47425010840047 48.923268153300086 22.47425010840047 9.262137858390815 0 1.774227503252014 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}{I|L}R{I|L}N{I|L}{I|L};{[DA]|[EG]}{I|L}R{I|L}GG{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}R{I|L}AD{I|L}{I|L};{I|L}{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]}N{I|L}{I|L};{I|L}{I|L}[RN]AD{I|L}{I|L};[KG]{I|L}[TP]W{I|L}{I|L};[KA]V[TP]W{I|L}{I|L};{I|L}{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]}GG{I|L}{I|L};[KA]QQ{I|L}N{I|L}{I|L};[KA]QQ{I|L}GG{I|L}{I|L} 7.3495;6.3498;4.3737;3.6898;3.3649;3.009;2.7603;2.6902;2.5703;1.5706 +;-;-;-;-;-;-;-;-;- + 436 1 1.407 66309.8 1.0 13518 5806 19323 HBL1_DMSO_200M_050219_1,19326 HBL1_DMSO_200M_050219_1,19326,EGLRLNLL False True DALRLNLL 92.897153 464.28511351347 35434392.0 19323.0 ENSG00000143614|ENST00000368655|GATAD2B 3.2099243799845376 2.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19327 92.898 33.0 2633100.0 25 0 442340.0 + 3180 AVVLPLARI 9 72 476.3211978037891 950.6278426743784 2 476.3211852908134 MULTI CID FTMS 0 0 0 19323 1818461.25 0.4523671045363424 2 -0.230682373046875 4 Unmodified _AVVLPLARI_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 42.09456458481378 0.0639583784996157 3 {[VA]|[{I|L}G]}V{I|L}{I|L}[RD]{I|L} 8 2 58.932 0.0 0.0 6.1992 0.0 0.0 0.0 68.05138574771718 68.05138574771718 43.00189682300783 0.0 0.0 0.0 0 1.325257498915995 1.6989700043360187 0.3807196863200844 0.4247425010840047 {[VA]|[{I|L}G]}V{I|L}{I|L}[RD]{I|L} 6.1992 - 344 + 1 1.407 71499.7 1.0 13519 5806 19323 HBL1_DMSO_200M_050219_1,19327 HBL1_DMSO_200M_050219_1,19327,AVVLPLARI True True AVVLPLARI 92.898333 476.321185290813 166840064.0 19323.0 nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27 2.32914400100708 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19328 92.9 29.0 1696300.0 25 0 212040.0 + 860 AEVDVNQKLLL 11 84 621.3578322744459 1240.7011116156916 2 621.3589965701103 MULTI CID FTMS 0 0 0 19323 1623181.875 0.0143098834845808 8 -0.8470230102539062 5 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 22.65808497894818 0.560183898709508 3 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L} 12 -1 + 65.78 0.0 0.0 5.3018 5.3018 81.099 0.0 0.0 0.0 12.455126678141504 7.447274948966935 7.447274948966935 4.955678082598922 0 1.8182503180159344 1.3010299956639813 0.6505149978319906 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}G{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}W{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}GW{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}G{I|L}W{I|L}{I|L};{[DA]|[EG]}VEVA{I|L}{I|L}EG{I|L}{I|L};{[VA]|[{I|L}G]}EDVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}VDA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}DG{I|L}EG{I|L}{I|L} 5.3018;4.9024;4.7494;4.7494;4.35;4.35;4.3021;4.298;4.134;4.0553 -;-;-;-;-;-;-;-;-;- 3169 1 1.407 43954.7 1.0 13520 5806 19323 HBL1_DMSO_200M_050219_1,19328 HBL1_DMSO_200M_050219_1,19328,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19329 92.901 32.0 1838600.0 25 0 246330.0 + 32103 RVLQNLLTI 9 80 535.340103053445 1068.66565317369 2 535.3407470583916 MULTI CID FTMS 0 0 0 19323 1415301.0 0.1208499537836562 3 -0.3083267211914062 6 Unmodified _RVLQNLLTI_ ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2 36.12702656103203 0.0967173616627612 3 [{I|L}T]{I|L}[WP]{I|L}{I|L}T{I|L} 9 4 + 61.832 0.0 0.0 5.7859 5.7859 91.467 0.0 0.0 0.0 10.328468331654292 29.974250108400465 10.328468331654292 61.831524890260994 0 0.9247425010840048 1.5228787452803376 0.3252574989159953 0.0 [{I|L}T]{I|L}[WP]{I|L}{I|L}T{I|L} 5.7859 - 184 1 1.407 50237.9 1.0 13521 5806 19323 HBL1_DMSO_200M_050219_1,19329 HBL1_DMSO_200M_050219_1,19329,RVLQNLLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19330 92.902 44.0 1604600.0 25 0 343640.0 + 43932 YGIPAIVKL 9 67 487.3068353895159 972.599117845832 2 487.3079711794853 MULTI CID FTMS 0 0 0 19323 1150587.75 0.6555898195321095 -2 0.2666549682617187 7 Unmodified _YGIPAIVKL_ ENSG00000173801|ENST00000393931|JUP;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 48.345845343767074 0.0439967357579942 3 YG{I|L}PA{I|L}VK{I|L} 9 0 + 58.012 0.0 0.0 5.9646 5.9646 90.27 0.0 0.0 0.0 24.235162698957275 13.24462415139152 13.24462415139152 17.501225267834002 0 0.718765315847925 1.3010299956639813 0.0 0.2742275032520141 + + YG{I|L}PA{I|L}VK{I|L};YG{I|L}{I|L}[PA]VK{I|L} 5.9646;4.1652 +;- + 102 + 1 1.407 61546.0 1.0 13522 5806 19323 HBL1_DMSO_200M_050219_1,19330 HBL1_DMSO_200M_050219_1,19330,YGIPAIVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19331 92.905 180.0 444450.0 25 0 71008.0 -1 0 83 939.958153312286 1877.901753691372 2 940.4605590701104 MULTI CID FTMS 0 0 0 19323 400784.0625 0.8818414948995884 -1 0.1290817260742187 8 3 [{I|L}P]MK{I|L}N{I|L}{I|L} 8 -1 37.253 0.0 0.0 1.9838 0.0 0.0 0.0 952.3104810685784 952.3104810685784 10.430607952939411 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.3807196863200844 [{I|L}P]MK{I|L}N{I|L}{I|L} 1.9838 - 392 1 1.407 57501.5 1.0 13523 5806 19323 HBL1_DMSO_200M_050219_1,19331 HBL1_DMSO_200M_050219_1,19331, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19332 92.917 638.0 349380.0 25 0 53814.0 + 10276 FQYESKVFYL 10 160 662.3342952504288 1322.6540375676575 2 662.3342773318291 MULTI CID FTMS 0 0 0 19323 362420.34375 0.7220034396084138 -1 0.1290817260742187 9 Unmodified _FQYESKVFYL_ ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF 91.08480475639789 0.0092558408645064 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YESKV{M(Oxidation (M))|F}[Y{I|L}] 10 0 + 73.124 0.0 0.0 5.5286 5.5286 77.943 0.0 0.0 0.0 2.22364120020832 5.764837301042718 2.22364120020832 2.22364120020832 0 2.3001648626366045 1.0457574905606752 0.6747425010840047 1.3945990182825423 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YESKV{M(Oxidation (M))|F}[Y{I|L}];[KS]EYV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}[Y{I|L}];[YE]SKV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}[Y{I|L}];[KS]EVY{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}[Y{I|L}];[KS]VEY{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}[Y{I|L}];[KS]EYV{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F}[Y{I|L}];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YESKVE{M(Oxidation (M))|F}{M(Oxidation (M))|F};[YE]SKV{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F}[Y{I|L}];{[TV]|[{I|L}S]}[SG]YV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}[Y{I|L}];[KS]EVY{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F}[Y{I|L}] 5.5286;5.3605;5.2153;4.9289;4.7696;4.6676;4.5566;4.5224;4.3454;4.236 +;-;-;-;-;-;-;-;-;- + 7720 1 1.407 165204.5 1.0 13524 5806 19323 HBL1_DMSO_200M_050219_1,19332 HBL1_DMSO_200M_050219_1,19332,FQYESKVFYL True True FQYESKVFYL 92.916564 662.334277331829 5010923.5 19323.0 ENSG00000128245|ENST00000248975|YWHAH;;ENST00000397492.1_1_22:32346295-32352776:+|nuORF 5.584148089090983 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19333 92.92 161.0 460030.0 25 0 64141.0 + 35830 SVLDDNKLLTL 11 96 615.8511100545097 1229.6876671758191 2 615.8508178591728 MULTI CID FTMS 0 0 0 19323 360867.71875 0.0298289898540951 5 -0.5333099365234375 10 Unmodified _SVLDDNKLLTL_ ENSG00000197102|ENST00000360184|DYNC1H1 49.74193281347159 0.1190592179673825 3 [VS]{I|L}[NG]D{I|L}{I|L}T 9 4 67.598 0.0 0.0 5.4971 0.0 0.0 0.0 314.1743351334796 314.1743351334796 22.754537344402905 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.7742275032520141 0.6505149978319906 [VS]{I|L}[NG]D{I|L}{I|L}T 5.4971 - 1727 1 1.407 59991.8 1.0 13525 5806 19323 HBL1_DMSO_200M_050219_1,19333 HBL1_DMSO_200M_050219_1,19333,SVLDDNKLLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19334 92.925 271.0 254170.0 25 0 61090.0 + 25673 NGIKVLLI 8 81 435.2945814683795 868.574610003559 2 435.2945129275322 MULTI CID FTMS 0 0 0 19323 340431.09375 0.1154339542173583 3 -0.3083267211914062 11 Unmodified _NGIKVLLI_ ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 32.116972079565 0.368454113111938 3 {I|L}{I|L}{[RE]|[WV]}{I|L}{I|L}{I|L} 7 3 + 36.232 0.0 0.0 4.1714 4.1714 83.146 0.0 0.0 0.0 11.522044440423898 9.520082085180944 9.520082085180944 11.522044440423898 0 0.6549471895720985 1.2218487496163564 0.3494850021680094 0.8494850021680094 {I|L}{I|L}{[RE]|[WV]}{I|L}{I|L}{I|L};[{I|L}V]K[NG]{I|L}{I|L}{I|L};[{I|L}V][W{I|L}]{I|L}{I|L}{I|L} 4.1714;2.8449;1.1289 -;-;- 47 1 1.407 58861.8 1.0 13526 5806 19323 HBL1_DMSO_200M_050219_1,19334 HBL1_DMSO_200M_050219_1,19334,NGIKVLLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19335 92.931 336.0 160850.0 25 0 14230.0 + -1 FVCRMEQVTV 10 86 642.8087950244022 1283.6030371156044 2 642.8093749880791 MULTI CID FTMS 0 0 0 19323 331776.5 0.2486913825293172 2 -0.230682373046875 12 Carbamidomethyl (C),Oxidation (M) _FVC(Carbamidomethyl (C))RM(Oxidation (M))EQVTV_ REV__ENSG00000137338|ENST00000682144|PGBD1 20.453626601364224 0.5043500229302764 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}G{I|L}M 6 -1 35.724 0.0 0.0 2.7831 0.0 0.0 0.0 638.2259978912481 638.2259978912481 11.5018312907727 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}G{I|L}M 2.7831 - 451 1 1.407 44432.2 1.0 13527 5806 19323 HBL1_DMSO_200M_050219_1,19335 HBL1_DMSO_200M_050219_1,19335,FVCRMEQVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19336 92.933 82.0 689690.0 25 0 129540.0 + 6299 MQHSVYLIL 9 89 552.2964728809432 1102.5783928286862 2 552.2996093630791 MULTI CID FTMS 0 0 0 19323 322537.375 0.8654531434487548 -1 0.1290817260742187 13 Unmodified _DVETATELLL_ ENST00000463586.1_1_1:171481117-171481318:+|nuORF;ENST00000392078.7_2_1:171454713-171481318:+|nuORF 20.453626601364224 0.5043500229302764 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VVQ[C(Carbamidomethyl (C))K]{I|L}{I|L} 9 6 + 25.812 0.0 0.0 2.3411 2.3411 78.314 0.0 0.0 0.0 4.201461969589321 4.2081875395237525 4.201461969589321 9.208187539523752 0 0.5 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VVQ[C(Carbamidomethyl (C))K]{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VV[AG][C(Carbamidomethyl (C))K]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EM{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VV{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}{I|L};[VS][C(Carbamidomethyl (C))H]VY{I|L}{I|L}{I|L} 2.3411;1.5059;1.4722;1.1194;1.0475 -;-;-;-;- 123 + 1 1.407 48784.7 1.0 13528 5806 19323 HBL1_DMSO_200M_050219_1,19336 HBL1_DMSO_200M_050219_1,19336,DVETATELLL False False MQHSVYLIL 92.932712 552.299609363079 3772458.5 19323.0 ENST00000463586.1_1_1:171481117-171481318:+|nuORF;;ENST00000392078.7_2_1:171454713-171481318:+|nuORF 0.9665210445721945 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19337 92.935 104.0 717020.0 25 0 79297.0 + 36159 SVVESVFKL 9 108 504.2923429517529 1006.5701329703058 2 504.2953369021416 MULTI CID FTMS 0 0 0 19323 328341.96875 0.0290810928195356 7 -0.7019424438476562 14 Unmodified _SVVESVFKL_ ENSG00000242372|ENST00000374450|EIF6;nc|ENSG00000242372|P56537-2|EIF6 38.17557092003332 0.0854718145212029 3 [VS]VESV{M(Oxidation (M))|F}K{I|L} 9 0 + 71.722 0.0 0.0 7.1254 7.1254 89.319 0.0 0.0 0.0 41.87891729856749 11.706962271689749 11.706962271689749 7.7815125038364386 0 0.7134679910804405 2.0 0.3494850021680094 0.0 + + [VS]VESV{M(Oxidation (M))|F}K{I|L};[VS]VESVK{M(Oxidation (M))|F}{I|L};[R{M(Oxidation (M))|F}][K{I|L}]E{[DS]|[MA]|[CV]|TT}{I|L};[R{M(Oxidation (M))|F}][K{I|L}]E{[ES]|[DT]|[{I|L}C]}V 7.1254;6.3523;0.60695;0.24137 +;-;-;- + 277 + 1 1.407 61535.8 1.0 13529 5806 19323 HBL1_DMSO_200M_050219_1,19337 HBL1_DMSO_200M_050219_1,19337,SVVESVFKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19338 92.937 79.0 542170.0 25 0 44831.0 + 10231 FQMPTPIQM 9 83 546.7638977484446 1091.5132425636891 2 546.7639037966728 MULTI CID FTMS 0 0 0 19323 252730.125 0.3811992884474523 3 -0.3083267211914062 15 Unmodified _FQMPTPIQM_ ENSG00000278053|ENST00000617633|DDX52 25.399314129420983 0.2080152500878129 3 [{I|L}P]Q[PS][QP]P[DN] 10 7 + 16.144 0.0 0.0 1.479 1.479 70.186 0.0 0.0 0.0 2.649087242336776 -5.2287874528033775 -5.2287874528033775 3.0102999566398125 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}P]Q[PS][QP]P[DN];[{I|L}P][TP]N[QP]P[DN];[{I|L}P]Q[YT]{[QN]|[E{I|L}]|[KN]}[DN];[MN]{M(Oxidation (M))|F}PGH[YK]V;[C(Carbamidomethyl (C))S]P[QP]N[YK]V;[{I|L}P][TP]HG{[QN]|[E{I|L}]|[KN]}[DN] 1.479;1.2033;0.8806;0.70983;0.69359;0.49034 -;-;-;-;-;- 183 1 1.407 41536.1 1.0 13530 5806 19323 HBL1_DMSO_200M_050219_1,19338 HBL1_DMSO_200M_050219_1,19338,FQMPTPIQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19339 92.945 399.0 305680.0 25 0 77908.0 + 27803 PLPQSLSLL 9 130 484.29439595747687 966.5742389817538 2 484.2938720583916 MULTI CID FTMS 0 0 0 19323 227520.09375 0.4970841556743733 -6 0.6759109497070312 16 Unmodified _PLPQSLSLL_ ENST00000591445.1_1_17:67501802-67515615:+|nuORF 58.6788170122104 0.0268135626297836 3 [{I|L}P]QPSS{I|L}{I|L}{I|L} 9 3 + 89.179 0.0 0.0 9.2263 9.2263 84.323 0.0 0.0 0.0 16.53212513775344 16.478174818886373 16.478174818886373 1.025684359364405 0 0.8494850021680094 2.0 1.6861818737241734 0.0 [{I|L}P]QPSS{I|L}{I|L}{I|L};[{I|L}P]QPS{I|L}S{I|L}{I|L};[{I|L}P]QSPS{I|L}{I|L}{I|L};[{I|L}P]QP{I|L}SS{I|L}{I|L};[{I|L}P]QSP{I|L}S{I|L}{I|L};[{I|L}P][AG]PSS{I|L}{I|L}{I|L};[{I|L}P][AG]PS{I|L}S{I|L}{I|L};[Q{I|L}]PPSS{I|L}{I|L}{I|L};[{I|L}P][AG]SPS{I|L}{I|L}{I|L};[{I|L}P][AG]P{I|L}SS{I|L}{I|L} 9.2263;9.1202;8.4622;8.4149;8.3561;8.2736;8.1675;7.5159;7.5095;7.4622 -;-;-;-;-;-;-;-;-;- 905 1 1.407 95026.4 1.0 13531 5806 19323 HBL1_DMSO_200M_050219_1,19339 HBL1_DMSO_200M_050219_1,19339,PLPQSLSLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19340 92.951 350.0 376830.0 25 0 48970.0 + 32047 RVLDLSENFL 10 139 603.3299268599987 1204.6453007867974 2 603.3307372927666 MULTI CID FTMS 0 0 0 19323 181759.265625 0.2974478526239434 -2 0.2666549682617187 17 Unmodified _RVLDLSENFL_ ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9 39.92294525591503 0.1583807461695373 3 [{I|L}V]RD{I|L}SEN{M(Oxidation (M))|F}{I|L} 10 2 + 74.301 0.0 0.0 6.1679 6.1679 82.697 0.0 0.0 0.0 0.6588908056930336 60.32206343782676 0.6588908056930336 3.979400086720375 0 0.5 0.0 0.75 1.086696871556164 [{I|L}V]RD{I|L}SEN{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]{I|L}SEN{M(Oxidation (M))|F}{I|L};[{I|L}V]RD{I|L}SEGG{M(Oxidation (M))|F}{I|L};[{I|L}A][W{I|L}]{I|L}SEN{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]{I|L}SEGG{M(Oxidation (M))|F}{I|L};[{I|L}A][W{I|L}]{I|L}SEGG{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{NN|[MP]|[D{I|L}]|[EV]}K[WR]{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}G[W{I|L}][WR]{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}G{[NV]|[RG]}K[WR]{M(Oxidation (M))|F}{I|L};[NP]{I|L}{M(Oxidation (M))|F}{I|L}[WR]{M(Oxidation (M))|F}{I|L} 6.1679;5.8376;5.4071;5.403;5.0768;4.0101;2.2204;2.1648;2.1238;2.1108 -;-;-;-;-;-;-;-;-;- 654 1 1.407 97440.4 1.0 13532 5806 19323 HBL1_DMSO_200M_050219_1,19340 HBL1_DMSO_200M_050219_1,19340,RVLDLSENFL False True RVLDLSENFL 92.951389 603.330737292767 10232975.0 19323.0 nc|ENSG00000239732|Q9NR96-3|TLR9;;nc|ENSG00000239732|Q9NR96-4|TLR9;;nc|ENSG00000239732|Q9NR96-5|TLR9;;nc|ENSG00000239732|Q9NR96-2|TLR9;;ENSG00000239732|ENST00000360658|TLR9 6.144042174021403 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19341 92.957 301.0 675880.0 25 0 144710.0 19964 LIGLSIKV 8 102 421.78905797045087 841.5635630077018 2 421.7887756228447 MULTI CID FTMS 0 0 0 19323 175693.65625 0.6772525734123835 -1 0.1290817260742187 18 Unmodified _LIGLSIKV_ ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF;ENST00000569299.1_1_16:66967504-66968009:-|nuORF 32.116972079565 0.368454113111938 3 {I|L}E{I|L}{I|L}KKV 7 4 + 83.618 0.0 0.0 9.936 9.936 89.734 0.0 0.0 0.0 34.81508216873416 4.259687322722812 4.259687322722812 4.259687322722812 0 1.1307196863200843 2.0 0.5 0.2396518287104437 {I|L}E{I|L}{I|L}KKV;{I|L}E{I|L}{I|L}KVK;{[QN]|[E{I|L}]|[KN]}{I|L}KKV{I|L};{I|L}E{I|L}V[K{I|L}]K;{I|L}EV{I|L}[K{I|L}]K;{I|L}{I|L}EKKV{I|L};{I|L}{I|L}KKEV{I|L};{I|L}{I|L}KEKV{I|L};[K{I|L}]K{I|L}EV{I|L};[K{I|L}]{I|L}KEV{I|L} 9.936;9.4298;6.9372;6.2177;5.1983;4.4394;4.0002;3.3537;3.1697;3.1697 -;-;-;-;-;-;-;-;-;- 355 + 1 1.407 160801.5 1.0 13533 5806 19323 HBL1_DMSO_200M_050219_1,19341 HBL1_DMSO_200M_050219_1,19341,LIGLSIKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19342 92.971 800.0 404150.0 25 0 43846.0 + 35914 SVPAGFLLA 9 131 874.5041207616039 873.4968442950038 1 874.5085327029228 MULTI CID FTMS 0 0 0 19323 152205.53125 0.1324508510549888 -6 0.6759109497070312 19 Unmodified _SVPAGFLLA_ ENSG00000051523|ENST00000261623|CYBA;ENST00000563526.5_1_16:88712508-88712646:-|nuORF 81.86404211737425 0.017065112157077 3 [PA]G{M(Oxidation (M))|F}{I|L}SV{I|L}A 9 4 + 68.611 0.0 0.0 7.8547 7.8547 81.461 0.0 0.0 0.0 5.586354214238291 8.010299956639813 5.586354214238291 0.4132529882056701 0 0.25 1.154901959985743 1.25 0.0 [PA]G{M(Oxidation (M))|F}{I|L}SV{I|L}A;[PA]G{M(Oxidation (M))|F}{I|L}{I|L}SVA;[PA]G{M(Oxidation (M))|F}{I|L}S{I|L}VA;[VS]W{I|L}{I|L}SVA;[VS]W{I|L}SV{I|L}A;[PA]G{M(Oxidation (M))|F}{I|L}SVA{I|L};[PA]G{M(Oxidation (M))|F}{I|L}{I|L}SG{I|L};[PA]GVS{M(Oxidation (M))|F}{I|L}{I|L}A;[PA]G{M(Oxidation (M))|F}[VS]{I|L}{I|L}A;[VS]W{I|L}S{I|L}VA 7.8547;7.8074;7.2889;7.2152;6.9881;6.9377;6.8904;6.5396;6.4544;6.4223 -;-;-;-;-;-;-;-;-;- 2933 1 1.407 213378.5 0.7400000095367432 13534 5806 19323 HBL1_DMSO_200M_050219_1,19342 HBL1_DMSO_200M_050219_1,19342,SVPAGFLLA True True SVPAGFLLA 92.970743 874.508532702923 38294992.0 19323.0 ENSG00000051523|ENST00000261623|CYBA;;ENST00000563526.5_1_16:88712508-88712646:-|nuORF 4.488944848378499 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19343 92.974 179.0 427210.0 25 0 64411.0 + + 27868 RVVPFISAI 9 119 501.31027580840674 1000.6059986836136 2 501.3103820681572 MULTI CID FTMS 0 0 0 19323 135759.703125 1.0 0 0.0 20 Unmodified _PLRVFVSAL_ ENSG00000185989|ENST00000334062|RASA3;nc|ENSG00000185989|Q14644-2|RASA3 26.88365393820708 0.1891292719743517 3 [{I|L}P][YK]P{I|L}SA{I|L} 9 -1 + 43.54 0.0 0.0 4.3513 4.3513 53.581 0.0 0.0 0.0 0.0 9.567490208862353 0.0 0.0 0 0.6989700043360187 1.2218487496163564 0.5 0.0 [{I|L}P][YK]P{I|L}SA{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}SA{I|L} 4.3513;4.3513 -;- 234 1 1.407 64646.6 1.0 13535 5806 19323 HBL1_DMSO_200M_050219_1,19343 HBL1_DMSO_200M_050219_1,19343,PLRVFVSAL False False RVVPFISAI 92.974209 501.310382068157 1869944.0 19323.0 ENSG00000185989|ENST00000334062|RASA3;;nc|ENSG00000185989|Q14644-2|RASA3 4.441981792449951 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19345 92.979 29.0 1588600.0 25 0 101870.0 -1 KVLDIMPLTL 10 75 579.8420521051584 1157.6695512771166 2 579.8437377810478 MULTI CID FTMS 0 0 0 19344 1860949.125 1.0 0 0.0 1 Oxidation (M) _KVLDIM(Oxidation (M))PLTL_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 38.61474834105838 0.1721950110283317 3 [{I|L}P]T{I|L}[YQ][{I|L}P]T{I|L} 10 -1 + 51.839 0.0 0.0 4.4779 4.4779 76.895 0.0 0.0 0.0 7.112044607530308 16.532125137753432 7.112044607530308 3.807196863200844 0 0.3807196863200844 2.0 0.3807196863200844 0.0 [{I|L}P]T{I|L}[YQ][{I|L}P]T{I|L};[{I|L}P]T{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}HHT{I|L};[{I|L}P]T{I|L}[YQ][{I|L}T]P{I|L};[{I|L}T]P{I|L}[YQ][{I|L}P]T{I|L};[{I|L}T][Q{I|L}]{I|L}{M(Oxidation (M))|F}[{I|L}P]T{I|L};[{I|L}T]P{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}HHT{I|L};[{I|L}T]P{I|L}[YQ][{I|L}T]P{I|L};[{I|L}T][Q{I|L}]{I|L}{M(Oxidation (M))|F}[{I|L}T]P{I|L};[{I|L}T][Q{I|L}]{I|L}[DV]{M(Oxidation (M))|F}P{I|L};[{I|L}P]T[HQ]KKPP{I|L} 4.4779;4.149;4.0658;3.8636;3.5766;3.5347;3.4514;3.1644;2.8356;2.6968 -;-;-;-;-;-;-;-;-;- 417 1 1.407 41611.0 1.0 13536 5807 19344 HBL1_DMSO_200M_050219_1,19345 HBL1_DMSO_200M_050219_1,19345,KVLDIMPLTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19346 92.98 63.0 1016400.0 25 0 133290.0 19924 LIASFWPSL 9 82 517.2872885255881 1032.560024117976 2 517.2881347537041 MULTI CID FTMS 0 0 0 19344 647985.75 0.1267238018445954 3 -0.3421783447265625 2 Unmodified _LIASFWPSL_ ENSG00000137675|ENST00000260229|MMP27 30.22481116460888 0.1466181017706357 3 [{I|L}A]{I|L}DV{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L} 9 6 + 64.09 0.0 0.0 6.2069 6.2069 76.971 0.0 0.0 0.0 46.89896278884483 2.9318250140072166 2.9318250140072166 0.4137052840692234 0 1.424742501084005 2.0 0.0 0.0 [{I|L}A]{I|L}DV{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L};[{I|L}A]{I|L}D[HA]PPS{I|L};[{I|L}A]{I|L}D[HA]PPTV;[{I|L}A]{I|L}D[HA]PP{I|L}S 6.2069;6.1669;5.5115;5.3961 -;-;-;- 242 + 1 1.407 54495.5 1.0 13537 5807 19344 HBL1_DMSO_200M_050219_1,19346 HBL1_DMSO_200M_050219_1,19346,LIASFWPSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19347 92.981 38.0 1423200.0 25 0 150580.0 + 23324 LTAPEDVFSKL 11 68 610.332746617401 1218.6509403016018 2 610.3324462771416 MULTI CID FTMS 0 0 0 19344 919123.375 1.0 0 0.0 3 Unmodified _LTAPEDVFSKL_ ENSG00000155561|ENST00000285968|NUP205 28.23362336080872 0.4292685378469897 3 [{I|L}T]APED[{M(Oxidation (M))|F}V]S[K{I|L}] 11 0 + 44.513 0.0 0.0 3.6526 3.6526 82.602 0.0 0.0 0.0 34.05510774626318 2.825160557860933 2.825160557860933 15.525012804190576 0 0.3807196863200844 1.6989700043360187 0.3494850021680094 0.0 + + [{I|L}T]APED[{M(Oxidation (M))|F}V]S[K{I|L}];[{I|L}T]APE[KG][YK]{[NV]|[RG]};[{I|L}T]AP{[{M(Oxidation (M))|F}D]|MM}M[{I|L}A][K{I|L}];[{I|L}T]AP[WQ][YK]{[NV]|[RG]};[{I|L}T]AP{[{M(Oxidation (M))|F}D]|MM}M[K{I|L}][{I|L}A] 3.6526;2.3787;2.3212;2.0861;1.9807 +;-;-;-;- + 115 + 1 1.407 43861.5 1.0 13538 5807 19344 HBL1_DMSO_200M_050219_1,19347 HBL1_DMSO_200M_050219_1,19347,LTAPEDVFSKL False True LTAPEDVFSKL 92.981355 610.332446277142 9434505.0 19344.0 ENSG00000155561|ENST00000285968|NUP205 3.139909108479818 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19348 92.983 61.0 866760.0 25 0 117310.0 + 9884 FPFPTPPSV 9 80 494.7607669353666 987.5069809375332 2 494.7607910037041 MULTI CID FTMS 0 0 0 19344 734635.3125 0.9888110458586864 -5 0.5630722045898438 4 Unmodified _FPFPTPPSV_ ENSG00000150990|ENST00000308736|DHX37 70.71552829651908 0.0208223590022201 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VV{M(Oxidation (M))|F}PPSV 9 3 + 60.473 0.0 0.0 6.1238 6.1238 92.123 0.0 0.0 0.0 40.73576872189598 10.62977812912628 10.62977812912628 43.87131607423747 0 1.0 2.0 1.1421590589602533 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VV{M(Oxidation (M))|F}PPSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[PG]VV[EP];{[VA]|[{I|L}G]}{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}VV[EP] 6.1238;1.6812;0.023624 -;-;- 315 + 1 1.407 43599.2 1.0 13539 5807 19344 HBL1_DMSO_200M_050219_1,19348 HBL1_DMSO_200M_050219_1,19348,FPFPTPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19349 92.985 124.0 657390.0 25 0 112810.0 + 45627 YVLPKLYVKL 10 84 412.5969595568861 1234.7690492708582 3 412.5969726443291 MULTI CID FTMS 0 0 0 19344 482442.6875 0.81103165605651 2 -0.2244949340820312 5 Unmodified _YVLPKLYVKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 53.832793166522166 0.0576554960245129 3 [YV]{I|L}PK{I|L}YVK{I|L} 10 0 + 77.049 0.0 0.0 6.24 6.24 91.457 0.0 0.0 0.0 57.79721813795433 12.64136888583522 12.64136888583522 20.74031267727719 0 1.6237125054200234 2.0 0.0 0.0 + + [YV]{I|L}PK{I|L}YVK{I|L};[YV]{I|L}{I|L}[KP]YVK{I|L} 6.24;4.5603 +;- + 442 + 1 1.407 71291.9 1.0 13540 5807 19344 HBL1_DMSO_200M_050219_1,19349 HBL1_DMSO_200M_050219_1,19349,YVLPKLYVKL True True YVLPKLYVKL 92.985413 412.596972644329 17002163.25 19344.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000471178.2_1_19:35024355-35024547:-|nuORF;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 7.671877702077229 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19350 92.988 128.0 595830.0 25 0 95184.0 -1 MLKCNVKSFL 10 68 628.3322460396369 1254.6499391460736 2 628.8373290896416 MULTI CID FTMS 0 0 0 -1 0 6 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LKC(Carbamidomethyl (C))NVKSFL_ ENSG00000007202|ENST00000528896|BLTP2;nc|ENSG00000007202|Q14667-2|BLTP2 10.823927491677226 0.6659270209832991 3 {I|L}Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 4 -1 19.693 0.0 0.0 1.5696 0.0 0.0 699.3687611310562 0.0 699.3687611310562 0.0 0.8490705531366736 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {I|L}Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 1.5696 - 185 1 1.407 62943.4 1.0 13541 5807 19344 HBL1_DMSO_200M_050219_1,19350 HBL1_DMSO_200M_050219_1,19350,MLKCNVKSFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19351 93.0 682.0 281890.0 25 0 24645.0 + 29949 QSNSACGWQSL 11 200 590.753619074688 1179.492685216176 2 590.7546264529228 MULTI CID FTMS 0 0 0 19344 301820.875 0.4754736635858718 -1 0.083831787109375 7 Unmodified _QSNSACGWQSL_ REV__ENST00000537109.1_1_11:63999298-63999511:+|nuORF 24.99096001346401 0.505407273373304 3 {[QS]|[NT]}Y[YE]Y{I|L}{[QS]|[NT]} 9 -1 + 51.908 0.0 0.0 4.4009 4.4009 83.931 0.0 0.0 0.0 10.577574631916749 12.439614936671504 10.577574631916749 12.028937514676471 0 0.0 0.958607314841775 1.329689690656103 0.5891368308784531 {[QS]|[NT]}Y[YE]Y{I|L}{[QS]|[NT]};{[QS]|[NT]}YYYE{I|L}{[QS]|[NT]};[AG]SY[YE]Y{I|L}{[QS]|[NT]};{[{M(Oxidation (M))|F}C]|[YS]}Q[YE]Y{I|L}{[QS]|[NT]};[{I|L}T]C{[YC]|[HE]}SY{I|L}{[QS]|[NT]};{[TV]|[{I|L}S]}C(Carbamidomethyl (C))[Y{M(Oxidation (M))|F}]Y{I|L}{[QS]|[NT]};[WD]E[NG]MT{I|L}{[QS]|[NT]};{[QS]|[NT]}[C(Carbamidomethyl (C))M][EP]T{I|L}{[QS]|[NT]};[MT]C{M(Oxidation (M))|F}TSY{I|L}{[QS]|[NT]};[AG]SYYYE{I|L}{[QS]|[NT]} 4.4009;3.381;3.2096;2.5283;2.4895;2.4718;2.3175;2.2003;2.1907;2.1898 -;-;-;-;-;-;-;-;-;- 3623 1 1.407 142936.8 1.0 13542 5807 19344 HBL1_DMSO_200M_050219_1,19351 HBL1_DMSO_200M_050219_1,19351,QSNSACGWQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19352 93.005 296.0 338710.0 25 0 93516.0 + 27643 PLGSPLLL 8 104 405.2603300278034 808.5061071224068 2 405.2601501345634 MULTI CID FTMS 0 0 0 19344 288648.34375 0.6150621574723443 11 -1.1324691772460938 8 Unmodified _PLGSPLLL_ ENST00000537708.1_1_12:6669555-6669804:-|nuORF 52.69307289633392 0.1265801145616722 3 [{I|L}P][SG]P{I|L}{I|L}{I|L} 8 0 + 48.109 0.0 0.0 5.9504 5.9504 88.436 0.0 0.0 0.0 13.30198135264581 23.667053245199625 13.30198135264581 9.51544993495972 0 0.7429928190999391 2.0 1.0044321917401078 0.0 + + [{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L} 5.9504;4.7735 +;- + 115 1 1.407 83898.6 1.0 13543 5807 19344 HBL1_DMSO_200M_050219_1,19352 HBL1_DMSO_200M_050219_1,19352,PLGSPLLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19353 93.018 735.0 246210.0 25 0 52343.0 -1 TVLDPARVCCT 11 170 646.3077873512005 1290.601021769201 2 646.3056518435478 MULTI CID FTMS 0 0 0 19344 272955.09375 1.0 0 0.0 9 2 Carbamidomethyl (C) _TVLDPARVC(Carbamidomethyl (C))C(Carbamidomethyl (C))T_ ENST00000587541.5_2_19:489443-489701:+|nuORF 18.1463463914782 0.6576820063886638 3 [DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}{I|L}S[YQ] 10 -1 + 61.086 0.0 0.0 4.7331 4.7331 82.75 0.0 0.0 0.0 21.913342577946068 5.764837301042718 5.764837301042718 9.16453948549924 0 0.0 2.0 1.045114016114533 0.0 [DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}{I|L}S[YQ];[DV]{M(Oxidation (M))|F}[CG]{M(Oxidation (M))|F}{I|L}{I|L}S[YQ];[DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}[YQ]S{I|L};[DV][HT]SE{I|L}{I|L}S[YQ];[DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}[YQ]TV;[DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}[YN]T{I|L};W{[YC]|[HE]}SE{I|L}{I|L}S[YQ];[DV]{M(Oxidation (M))|F}[CG]{M(Oxidation (M))|F}{I|L}[YQ]S{I|L};W{[YC]|[HE]}C{I|L}{I|L}{I|L}S[YQ];[DV]{M(Oxidation (M))|F}[CG]{M(Oxidation (M))|F}{I|L}[YQ]TV 4.7331;4.023;3.8066;3.6667;3.6433;3.598;3.4478;3.0965;3.0781;2.9332 -;-;-;-;-;-;-;-;-;- 3792 + 1 1.407 139795.5 1.0 13544 5807 19344 HBL1_DMSO_200M_050219_1,19353 HBL1_DMSO_200M_050219_1,19353,TVLDPARVCCT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19354 93.024 331.0 481980.0 25 0 58618.0 + 34996 SQMSELWGV 9 168 518.7415173208931 1035.468481708586 2 518.7422973513603 MULTI CID FTMS 0 0 0 19344 219740.953125 1.0 0 0.0 10 Unmodified _SQMSELWGV_ ENSG00000163874|ENST00000373087|ZC3H12A 25.399314129420983 0.2080152500878129 3 {I|L}DVS[YV]GV 8 6 14.792 0.0 0.0 1.4285 0.0 0.0 185.02849604789043 0.0 185.02849604789043 0.0 2.5730628353721947 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DVS[YV]GV 1.4285 - 572 + 1 1.407 122137.8 1.0 13545 5807 19344 HBL1_DMSO_200M_050219_1,19354 HBL1_DMSO_200M_050219_1,19354,SQMSELWGV False True SQMSELWGV 93.024111 518.74229735136 2720278.25 19344.0 ENSG00000163874|ENST00000373087|ZC3H12A 1.7877339323361714 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19355 93.026 91.0 749560.0 25 0 83373.0 19101 LDSLRQYL 8 96 504.28130929896207 1006.5480656647242 2 504.2820007205009 MULTI CID FTMS 0 0 0 19344 189516.8125 0.9167963922787618 -1 0.083831787109375 11 Unmodified _LDSLRQYL_ ENSG00000103154|ENST00000305202|NECAB2;nc|ENSG00000103154|Q7Z6G3-2|NECAB2 28.486842064014134 0.4448922141344407 3 [VS]W{I|L}N{I|L}{I|L}Y 8 7 + 52.785 0.0 0.0 5.2441 5.2441 76.105 0.0 0.0 0.0 21.46082806091883 10.172203223519531 10.172203223519531 1.7609125905568137 0 0.3182503180159344 2.0 0.1989700043360188 0.4247425010840047 [VS]W{I|L}N{I|L}{I|L}Y;[VS]W{I|L}{I|L}N{I|L}Y;[VS]W{I|L}VQ{I|L}Y;[VS]W{I|L}GG{I|L}{I|L}Y;[VS]W{I|L}{I|L}GG{I|L}Y;[VS]W{I|L}V[AG]{I|L}Y;[VS]E[R{I|L}]Q{I|L}Y;WVHV{I|L}W[PA];WVE[VS]{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}DS{I|L}N{I|L}{I|L}Y 5.2441;5.0692;4.945;3.9019;3.727;3.6029;3.466;3.112;2.7621;2.6486 -;-;-;-;-;-;-;-;-;- 493 1 1.407 57934.8 1.0 13546 5807 19344 HBL1_DMSO_200M_050219_1,19355 HBL1_DMSO_200M_050219_1,19355,LDSLRQYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19356 93.04 778.0 296120.0 25 0 23818.0 + 10808 FYVDSDMVNEF 11 178 683.2867548051889 1364.5589566771778 2 683.2887451052666 MULTI CID FTMS 0 0 0 19344 221663.109375 0.6543029255927563 -1 0.083831787109375 12 Unmodified _FYVDSDMVNEF_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 49.55428908609986 0.1200983873401432 3 {[QS]|[NT]}[NS]Y{M(Oxidation (M))|F}MVNE{M(Oxidation (M))|F} 11 6 + 35.415 0.0 0.0 2.5954 2.5954 66.172 0.0 0.0 0.0 0.0121691536424677 9.185374766156636 0.0121691536424677 0.0121691536424677 0 0.4802046884880938 0.0 0.9679001828205483 0.1505149978319906 {[QS]|[NT]}[NS]Y{M(Oxidation (M))|F}MVNE{M(Oxidation (M))|F};[AG]S[NS]Y{M(Oxidation (M))|F}MVNE{M(Oxidation (M))|F};{[QS]|[NT]}[NS]M{M(Oxidation (M))|F}YVNE{M(Oxidation (M))|F};[AG]S[NS]M{M(Oxidation (M))|F}YVNE{M(Oxidation (M))|F};[MD]SDV{M(Oxidation (M))|F}YVNE{M(Oxidation (M))|F};[DV]MSD{M(Oxidation (M))|F}YVNE{M(Oxidation (M))|F};[QA]{[C(Carbamidomethyl (C))G]|[NC]}Y{M(Oxidation (M))|F}MVNE{M(Oxidation (M))|F};{[ET]|[MV]}DSD{M(Oxidation (M))|F}YVNE{M(Oxidation (M))|F};[AG]A{[C(Carbamidomethyl (C))G]|[NC]}Y{M(Oxidation (M))|F}MVNE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}CSD{M(Oxidation (M))|F}YVNE{M(Oxidation (M))|F} 2.5954;2.5945;2.3108;2.3099;2.2441;2.2372;2.1164;2.0692;2.0142;1.9661 -;-;-;-;-;-;-;-;-;- 4404 1 1.407 166796.2 1.0 13547 5807 19344 HBL1_DMSO_200M_050219_1,19356 HBL1_DMSO_200M_050219_1,19356,FYVDSDMVNEF True True FYVDSDMVNEF 93.039586 683.288745105267 6333691.5 19344.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 6.5538740158081055 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19357 93.046 272.0 326290.0 25 0 33888.0 + 29473 QLIPAVPGI 9 124 454.2839022856863 906.5532516381726 2 454.2842590212822 MULTI CID FTMS 0 0 0 19344 220659.59375 0.4755055713983928 -5 0.5630722045898438 13 Unmodified _QLIPAVPGI_ ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160 28.486842064014134 0.1687311288560894 3 [PG]{I|L}Q{I|L}{M(Oxidation (M))|F}P 7 7 30.934 0.0 0.0 3.4123 0.0 0.0 0.0 151.14886866381633 151.14886866381633 4.4656163662370645 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.0 0.0 [PG]{I|L}Q{I|L}{M(Oxidation (M))|F}P 3.4123 - 899 1 1.407 70861.4 1.0 13548 5807 19344 HBL1_DMSO_200M_050219_1,19357 HBL1_DMSO_200M_050219_1,19357,QLIPAVPGI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19358 93.06 800.0 197460.0 25 0 12661.0 + + -1 KLFGDPDEFPLA 12 168 674.8427516698902 1347.6709504065802 2 675.3461181521416 MULTI CID FTMS 0 0 0 19344 218661.78125 1.0 0 0.0 14 Carbamidomethyl (C) _HYRC(Carbamidomethyl (C))TFLAPAL_ ENSG00000090470|ENST00000204549|PDCD7 12.240655878213236 0.7805268987462184 3 [{I|L}P][HV]NDPE{M(Oxidation (M))|F}PA{I|L} 12 -1 + 71.269 0.0 0.0 5.2883 5.2883 79.798 0.0 0.0 0.0 5.316591764662746 9.269608018250594 5.316591764662746 3.979400086720375 0 1.0629529932484498 2.0 0.0 0.3807196863200844 [{I|L}P][HV]NDPE{M(Oxidation (M))|F}PA{I|L};[{I|L}P][HV]NPDE{M(Oxidation (M))|F}PA{I|L};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}NDPE{M(Oxidation (M))|F}PA{I|L};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}NDPEP{M(Oxidation (M))|F}A{I|L};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}NPDE{M(Oxidation (M))|F}PA{I|L};[VS]{I|L}{M(Oxidation (M))|F}NDPE{M(Oxidation (M))|F}PA{I|L};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}NPDEP{M(Oxidation (M))|F}A{I|L};[{I|L}P][HV]GGDPE{M(Oxidation (M))|F}PA{I|L};[VS]{I|L}{M(Oxidation (M))|F}NDPEP{M(Oxidation (M))|F}A{I|L};[{I|L}P][HV]NDPEP{M(Oxidation (M))|F}A{I|L} 5.2883;4.9931;4.8938;4.6283;4.5986;4.5653;4.333;4.3307;4.2998;4.2808 -;-;-;-;-;-;-;-;-;- 4201 1 1.407 116214.9 0.959999978542328 13549 5807 19344 HBL1_DMSO_200M_050219_1,19358 HBL1_DMSO_200M_050219_1,19358,HYRCTFLAPAL False False KLFGDPDEFPLA 93.059615 674.8451 2415797.5 19344.0 ENSG00000090470|ENST00000204549|PDCD7 7.31719160079956 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19359 93.063 152.0 436540.0 25 0 43237.0 + 39091 RFLYSNIAF 9 112 565.3082011185419 1128.6018493038837 2 565.8047363162041 MULTI CID FTMS 0 0 0 19344 224619.625 0.0940827005156085 6 -0.6181106567382812 15 Unmodified _TVYVSVFTLT_ nc|ENSG00000135476|Q14674-2|ESPL1;ENSG00000135476|ENST00000257934|ESPL1 9.38312468134398 0.6832340498775793 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RYSN{I|L}A 8 8 33.353 0.0 0.0 2.9552 0.0 0.0 0.0 161.06548849556728 161.06548849556728 14.76911912748342 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RYSN{I|L}A 2.9552 - 299 1 1.407 57565.8 1.0 13550 5807 19344 HBL1_DMSO_200M_050219_1,19359 HBL1_DMSO_200M_050219_1,19359,TVYVSVFTLT False False RFLYSNIAF 93.062648 565.804736316204 6182586.5 19344.0 nc|ENSG00000135476|Q14674-2|ESPL1;;ENSG00000135476|ENST00000257934|ESPL1 6.167471249898274 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19360 93.064 80.0 516250.0 25 0 58683.0 -1 0 95 520.6075208594779 2598.001221964389 5 520.8083373904228 MULTI CID FTMS 0 0 0 19344 198427.890625 0.9155116303362764 -1 0.083831787109375 16 3 [{I|L}V]QQ{I|L} 5 -1 28.136 0.0 0.0 1.083 0.0 0.0 0.0 2013.623816529096 2013.623816529096 14.641237821364967 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.8494850021680094 [{I|L}V]QQ{I|L} 1.083 - 227 1 1.407 39511.6 1.0 13551 5807 19344 HBL1_DMSO_200M_050219_1,19360 HBL1_DMSO_200M_050219_1,19360, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19361 93.078 800.0 104280.0 25 0 5872.4 + 35769 SVIMGLSTI 9 123 920.5122285437362 919.5049520771362 1 920.5113403201104 MULTI CID FTMS 0 0 0 19344 181153.90625 0.1753326751442437 4 -0.4494781494140625 17 Unmodified _SVIMGLSTI_ ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 107.99703571036002 0.0067560930197464 3 [VS]{I|L}GM{I|L}ST{I|L} 9 2 + 57.062 0.0 0.0 6.2057 6.2057 78.271 0.0 0.0 0.0 13.348644886401871 5.686814654273675 5.686814654273675 1.1448702377890785 0 1.110924374808178 0.0 1.610924374808178 0.0 [VS]{I|L}GM{I|L}ST{I|L};[VS]{I|L}MG{I|L}ST{I|L};[VS]{I|L}GM{I|L}{I|L}{[MG]|[TS]};[VS]{I|L}GP{M(Oxidation (M))|F}ST{I|L};[VS]{I|L}MG{I|L}{I|L}{[MG]|[TS]};[VS]{I|L}G{I|L}MST{I|L};[VS]{I|L}MAVST{I|L};[VS]{I|L}GMS{I|L}T{I|L};[{I|L}T]C(Carbamidomethyl (C)){I|L}{I|L}ST{I|L};[VS]{I|L}MGS{I|L}T{I|L} 6.2057;6.0812;5.2909;5.2291;5.1664;5.143;5.0449;4.7802;4.754;4.6557 -;+;-;-;-;-;-;-;-;- + 3856 1 1.407 58786.7 0.8199999928474426 13552 5807 19344 HBL1_DMSO_200M_050219_1,19361 HBL1_DMSO_200M_050219_1,19361,SVIMGLSTI True True SVIMGLSTI 93.078334 920.51134032011 9777339.0 19344.0 ENSG00000137713|ENST00000527614|PPP2R1B;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B 3.912855625152588 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19362 93.093 800.0 184700.0 25 0 11630.0 -1 0 141 729.0187008473104 2184.034273142131 3 729.3517944216728 MULTI CID FTMS 0 0 0 19344 170349.09375 0.6774397458245277 -1 0.083831787109375 18 3 {[QN]|[E{I|L}]|[KN]}NYQ[WR]YNE{I|L} 11 -1 58.723 0.0 0.0 2.6887 0.0 0.0 0.0 672.2984221863475 672.2984221863475 26.256210381321907 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.1462566630072955 1.885151878060192 {[QN]|[E{I|L}]|[KN]}NYQ[WR]YNE{I|L} 2.6887 - 7352 1 1.407 124606.6 0.8600000143051147 13553 5807 19344 HBL1_DMSO_200M_050219_1,19362 HBL1_DMSO_200M_050219_1,19362, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19363 93.107 800.0 166700.0 25 0 15406.0 + 8693 EVKIAEQLFI 10 167 595.3450803702775 1188.675607807355 2 595.3450195193291 MULTI CID FTMS 0 0 0 19344 161650.921875 0.1199723370342528 4 -0.4494781494140625 19 Unmodified _EVKIAEQLFI_ REV__ENSG00000241399|ENST00000259053|CD302;REV__nc|ENSG00000054219|O60449-2|LY75;REV__nc|ENSG00000054219|O60449-3|LY75;REV__nc|ENSG00000241399|Q8IX05-2|CD302 27.628801355627647 0.3479284626772844 3 K{I|L}{M(Oxidation (M))|F}{I|L} 4 -1 34.597 0.0 0.0 2.9105 0.0 0.0 669.3337269513687 0.0 669.3337269513687 0.0 20.784634594678263 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 K{I|L}{M(Oxidation (M))|F}{I|L} 2.9105 - 416 1 1.407 101776.2 0.8100000023841858 13554 5807 19344 HBL1_DMSO_200M_050219_1,19363 HBL1_DMSO_200M_050219_1,19363,EVKIAEQLFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19364 93.121 800.0 343490.0 25 0 37377.0 + 37555 TLIDLPGITRV 11 172 599.3634157061663 1196.7122784791325 2 599.3633911013603 MULTI CID FTMS 0 0 0 19344 140358.296875 0.5694360416290547 -1 0.083831787109375 20 Unmodified _TLIDLPGITRV_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 78.06048673739656 0.0090990320965632 3 [{I|L}T]{I|L}D{I|L}VAPRS{I|L} 11 6 + 82.671 0.0 0.0 6.9082 6.9082 85.998 0.0 0.0 0.0 7.506848736033589 4.771212547196626 4.771212547196626 4.771212547196626 0 1.492992819099939 2.0 1.3695063820031517 0.6747425010840047 [{I|L}T]{I|L}D{I|L}VAPRS{I|L};[{I|L}T]{I|L}D{I|L}VAPRTV;[{I|L}T]VE{I|L}VAPRS{I|L};[{I|L}T]VATR{I|L}D{I|L}PV;[{I|L}T]{I|L}D{I|L}RTAVPV;[{I|L}T]{I|L}GTR{I|L}EVPV;[{I|L}T]{I|L}D{I|L}P{[VA]|[{I|L}G]}RS{I|L};[{I|L}T]{I|L}DV{I|L}APRS{I|L};[{I|L}T]{I|L}GTR{I|L}D{I|L}PV;[{I|L}T]VE{I|L}VAPRTV 6.9082;6.5095;6.3683;6.2809;6.2202;6.0789;6.0251;6.0251;5.9921;5.9696 -;-;-;-;-;-;-;-;-;- 11790 + 1 1.407 201857.4 0.7699999809265137 13555 5807 19344 HBL1_DMSO_200M_050219_1,19364 HBL1_DMSO_200M_050219_1,19364,TLIDLPGITRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19366 93.125 13.0 2950200.0 25 0 447400.0 + 21580 LPKNILIM 8 67 471.2962775002167 940.5780020672336 2 471.2964660525322 MULTI CID FTMS 0 0 0 19365 3967727.5 0.0857791399514467 5 -0.4712600708007812 1 Unmodified _LPKNILIM_ REV__ENSG00000154415|ENST00000284601|PPP1R3A 26.34127834903884 0.4900704351052977 3 [{I|L}P]K{I|L}N{I|L} 6 -1 43.109 0.0 0.0 4.5833 0.0 0.0 0.0 259.11295014756473 259.11295014756473 1.6824376479242176 0.0 0.0 0.0 0 0.0 2.0 0.0 1.0 [{I|L}P]K{I|L}N{I|L} 4.5833 - 101 1 1.414 35286.2 1.0 13556 5808 19365 HBL1_DMSO_200M_050219_1,19366 HBL1_DMSO_200M_050219_1,19366,LPKNILIM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19367 93.127 14.0 6157500.0 25 0 912870.0 + 11735 GLIEILKKV 9 85 506.8419687512129 1011.6693845692256 2 506.8422729372978 MULTI CID FTMS 0 0 0 19365 4130229.75 0.5738249711679412 1 -0.0776443481445312 2 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 74.92900055777586 0.0191935851694334 3 VA{I|L}E{I|L}{I|L}KKV 9 2 + 101.91 0.0 0.0 10.073 10.073 85.07 0.0 0.0 0.0 36.47817481888637 1.249387366082999 1.249387366082999 1.249387366082999 0 1.610924374808178 2.0 0.4247425010840047 0.25 VA{I|L}E{I|L}{I|L}KKV;VA{I|L}E{I|L}{I|L}KVK 10.073;9.9497 -;- 468 + 1 1.414 70007.4 1.0 13557 5808 19365 HBL1_DMSO_200M_050219_1,19367 HBL1_DMSO_200M_050219_1,19367,GLIEILKKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19368 93.128 16.0 8800000.0 25 0 2075800.0 + 11732 GLIEILKKV 9 78 338.2303843860517 1011.6693237583552 3 338.2302429080009 MULTI CID FTMS 0 0 0 19365 4024811.0 0.637555896674978 1 -0.0776443481445312 3 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 36.12702656103203 0.0967173616627612 3 {[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KKV 9 0 + 70.93 0.0 0.0 7.0112 7.0112 80.864 0.0 0.0 0.0 27.147642715192504 1.249387366082999 1.249387366082999 1.249387366082999 0 0.3494850021680094 2.0 0.5 0.2134679910804404 + + {[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KKV;{[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KVK;{[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}VKK;{[VA]|[{I|L}G]}{I|L}EV{I|L}{I|L}KK;{[VA]|[{I|L}G]}{I|L}VE{I|L}{I|L}KK;{[VA]|[{I|L}G]}V{I|L}E{I|L}{I|L}KK 7.0112;6.8877;6.1598;4.0089;3.9571;3.2888 +;-;-;-;-;- + 351 + 1 1.414 121369.0 1.0 13558 5808 19365 HBL1_DMSO_200M_050219_1,19368 HBL1_DMSO_200M_050219_1,19368,GLIEILKKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19369 93.129 15.0 3362500.0 25 0 383640.0 + 16366 IYPVNAISF 9 72 512.2791580445313 1022.5437631558626 2 512.2794677615166 MULTI CID FTMS 0 0 0 19365 3452634.0 0.3536465924746106 -4 0.4973373413085937 4 Unmodified _IYPVNAISF_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 30.22481116460888 0.1466181017706357 3 [VP]NA{I|L}Y 6 4 40.182 0.0 0.0 3.9296 0.0 0.0 0.0 362.1717781935666 362.1717781935666 12.237059521965108 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.3807196863200844 [VP]NA{I|L}Y 3.9296 - 141 1 1.414 46921.7 1.0 13559 5808 19365 HBL1_DMSO_200M_050219_1,19369 HBL1_DMSO_200M_050219_1,19369,IYPVNAISF False True IYPVNAISF 93.129014 512.279467761517 148806448.0 19365.0 nc|ENSG00000154473|O43684-2|BUB3;;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;;ENSG00000154473|ENST00000368865|BUB3 4.565607229868571 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19370 93.13 17.0 3866700.0 25 0 787240.0 + 34398 SLVDEFKEL 9 77 540.2847020083665 1078.5548510835329 2 540.2850219607353 MULTI CID FTMS 0 0 0 19365 2940934.5 0.9976520223511596 -2 0.230682373046875 5 Unmodified _SLVDEFKEL_ ENSG00000196419|ENST00000360079|XRCC6;ENST00000478914.1_1_22:42052971-42057696:+|nuORF;nc|ENSG00000196419|P12956-2|XRCC6 46.0223103267499 0.0490911897871712 3 {[TV]|[{I|L}S]}VDE{M(Oxidation (M))|F}KE{I|L} 9 0 + 79.019 0.0 0.0 7.3264 7.3264 93.651 0.0 0.0 0.0 27.147642715192504 13.851839456708817 13.851839456708817 13.851839456708817 0 0.805462187404089 2.0 1.325257498915995 0.0 + + {[TV]|[{I|L}S]}VDE{M(Oxidation (M))|F}KE{I|L};{[TV]|[{I|L}S]}VD{M(Oxidation (M))|F}{I|L}E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}V[{M(Oxidation (M))|F}V]EE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}V[{M(Oxidation (M))|F}V]A{[DS]|[MA]|[CV]|TT}E{I|L};{[TV]|[{I|L}S]}[MT]{I|L}A{[DS]|[MA]|[CV]|TT}E{I|L} 7.3264;6.0421;4.6501;3.8519;2.5269 +;-;-;-;- + 627 + 1 1.414 58435.2 1.0 13560 5808 19365 HBL1_DMSO_200M_050219_1,19370 HBL1_DMSO_200M_050219_1,19370,SLVDEFKEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19371 93.131 32.0 1891800.0 25 0 321330.0 + 7495 EGYLIPIR 8 60 480.7794978968272 959.5444428604544 2 480.7786437869072 MULTI CID FTMS 0 0 0 19365 1285574.375 0.0309083657121106 7 -0.68505859375 6 Unmodified _EGYLIPIR_ REV__ENSG00000038274|ENST00000321757|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-2|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-3|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-4|MAT2B 28.486842064014134 0.4448922141344407 3 {[DA]|[EG]}Y{I|L}{I|L}[RP]{I|L} 8 -1 + 50.136 0.0 0.0 5.2249 5.2249 86.03 0.0 0.0 0.0 39.29815243291739 3.62537344498152 3.62537344498152 9.771212547196626 0 0.8807196863200843 1.6989700043360187 0.0 0.4247425010840047 {[DA]|[EG]}Y{I|L}{I|L}[RP]{I|L};{[DA]|[EG]}{I|L}Y{I|L}[RP]{I|L} 5.2249;4.2066 -;- 44 + 1 1.414 54574.3 1.0 13561 5808 19365 HBL1_DMSO_200M_050219_1,19371 HBL1_DMSO_200M_050219_1,19371,EGYLIPIR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19372 93.133 56.0 1497400.0 25 0 96766.0 + 29342 QIVELIEKI 9 106 542.834275736372 1083.653998539544 2 542.8344604372978 MULTI CID FTMS 0 0 0 19365 839452.0625 0.4148701063026359 1 -0.0776443481445312 7 Unmodified _QIVELIEKI_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 40.23920728925047 0.0741434193262949 3 [Q{I|L}]VE{I|L}{I|L}EK{I|L} 9 0 [Q{I|L}] + + 53.433 17.218 7.1404 4.9308 4.9308 55.409 0.0 0.0 0.0 0.0 36.89085048068585 0.0 0.0 0 0.7396518287104438 0.0 0.7614393726401688 0.1747425010840047 + + [Q{I|L}]VE{I|L}{I|L}EK{I|L} 4.9308 + + 331 + 1 1.414 70174.6 1.0 13562 5808 19365 HBL1_DMSO_200M_050219_1,19372 HBL1_DMSO_200M_050219_1,19372,QIVELIEKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19373 93.134 53.0 949020.0 25 0 130480.0 + 7759 ELFFLLYL 8 79 529.3002944283521 1056.586035923504 2 529.2995483279228 MULTI CID FTMS 0 0 0 19365 572915.5625 0.2526579019379688 9 -0.798675537109375 8 Unmodified _ELFFLLYL_ ENST00000295958.9_2_4:39553614-39553689:-|nuORF 19.438996006549623 0.6237395211498085 3 [EP]PN{I|L}V{I|L}Y{I|L} 9 4 + 43.663 0.0 0.0 4.1324 4.1324 78.158 0.0 0.0 0.0 6.082268588648248 29.058415520056545 6.082268588648248 6.020599913279618 0 0.7742275032520141 0.0 0.5 0.3807196863200844 [EP]PN{I|L}V{I|L}Y{I|L};[EP]PNV{I|L}{I|L}Y{I|L};[EP]PN{I|L}{I|L}VY{I|L};[EP]PGG{I|L}V{I|L}Y{I|L};[EP]{[QV]|[N{I|L}]|[RA]|[KV]}PV{I|L}Y{I|L};[EP]PGG{I|L}{I|L}VY{I|L};[EP]PGGV{I|L}{I|L}Y{I|L};[EP]{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}VY{I|L};[K{I|L}][YR]CVY{I|L} 4.1324;3.5626;3.4872;2.9006;2.6427;2.6157;2.3308;1.9974;0.84774 -;-;-;-;-;-;-;-;- 196 1 1.414 45298.2 1.0 13563 5808 19365 HBL1_DMSO_200M_050219_1,19373 HBL1_DMSO_200M_050219_1,19373,ELFFLLYL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19374 93.136 71.0 857380.0 25 0 125200.0 + 36308 SYLFSHVPL 9 88 531.7844631851925 1061.554373437185 2 531.7842285037041 MULTI CID FTMS 0 0 0 19365 554355.75 0.1892046447918877 -2 0.230682373046875 9 Unmodified _SYLFSHVPL_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 26.88365393820708 0.1891292719743517 3 [HS]{M(Oxidation (M))|F}V{I|L} 5 5 20.635 0.0 0.0 1.9438 0.0 0.0 0.0 475.2187254343709 475.2187254343709 5.061668675368626 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 0.0 [HS]{M(Oxidation (M))|F}V{I|L} 1.9438 - 196 1 1.414 51122.3 1.0 13564 5808 19365 HBL1_DMSO_200M_050219_1,19374 HBL1_DMSO_200M_050219_1,19374,SYLFSHVPL False True SYLFSHVPL 93.135852 531.784228503704 77187384.0 19365.0 ENSG00000147224|ENST00000372435|PRPS1;;ENSG00000229937|ENST00000506618|PRPS1L1;;ENSG00000101911|ENST00000380668|PRPS2;;nc|ENSG00000147224|P60891-2|PRPS1;;nc|ENSG00000101911|P11908-2|PRPS2 5.287447452545166 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19375 93.138 98.0 796450.0 25 0 58591.0 + -1 VTVQEMSINV 10 117 568.2846968350573 1134.5548407369145 2 568.2852661013603 MULTI CID FTMS 0 0 0 19365 379697.125 0.5007316266029703 1 -0.0776443481445312 10 Oxidation (M) _VTVQEM(Oxidation (M))SINV_ REV__ENST00000507860.1_1_5:138629450-138650445:+|nuORF;REV__ENST00000512876.5_1_5:138629414-138653336:+|nuORF;REV__ENST00000513121.1_1_5:138629450-138650445:+|nuORF 13.90604991867851 0.6142120002215601 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PM 4 -1 23.41 0.0 0.0 2.0634 0.0 0.0 0.0 643.3581205444524 643.3581205444524 6.4476266894289935 0.0 0.0 0.0 0 0.0 0.721246399047171 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PM 2.0634 - 141 + 1 1.414 62908.9 1.0 13565 5808 19365 HBL1_DMSO_200M_050219_1,19375 HBL1_DMSO_200M_050219_1,19375,VTVQEMSINV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19376 93.141 180.0 497350.0 25 0 53750.0 + 17214 KLLEYIEEI 9 117 575.3233664411573 1148.6321799491143 2 575.3235351443291 MULTI CID FTMS 0 0 0 19365 357283.78125 0.0878710996283508 -2 0.230682373046875 11 Unmodified _KLLEYIEEI_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 39.21299971606389 0.0797768173001226 3 {[QN]|[E{I|L}]|[KN]}{I|L}KY{I|L}EE{I|L} 9 2 + 72.235 0.0 0.0 6.2888 6.2888 78.332 0.0 0.0 0.0 0.9927294125834294 14.97302484056646 0.9927294125834294 0.9927294125834294 0 0.7302046884880937 0.0 1.63395215733975 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}KY{I|L}EE{I|L};[Y{I|L}]E{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}Y{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KYE{I|L}E{I|L};[Y{I|L}]E{I|L}KE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}YK{I|L}EE{I|L};{I|L}{I|L}KEY{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}KE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}YE{I|L}E{I|L} 6.2888;6.2024;6.0278;5.9822;5.6221;5.5356;5.5036;5.3752;5.361;5.3154 -;-;-;-;-;-;-;-;-;- 908 1 1.414 71824.0 1.0 13566 5808 19365 HBL1_DMSO_200M_050219_1,19376 HBL1_DMSO_200M_050219_1,19376,KLLEYIEEI True True KLLEYIEEI 93.141487 575.323535144329 37508228.0 19365.0 nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;nc|ENSG00000072571|O75330-4|HMMR;;ENSG00000072571|ENST00000393915|HMMR 3.049915711085001 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19377 93.145 194.0 391510.0 25 0 63591.0 + 22242 LPRIFTSI 8 107 473.78907192202655 945.5635909108532 2 473.7893859744072 MULTI CID FTMS 0 0 0 19365 342932.21875 0.7163627768147647 1 -0.0776443481445312 12 Unmodified _LPRIFTSI_ ENSG00000167085|ENST00000300408|PHB1;ENST00000355202.8_1_19:38187835-38188303:-|nuORF;ENST00000393345.8_1_17:47486298-47490626:-|nuORF;nc|ENSG00000167085|P35232-2|PHB1 53.832793166522166 0.1212192986213991 3 [{I|L}P]R{I|L}{M(Oxidation (M))|F}TS{I|L} 8 0 + 64.674 0.0 0.0 6.8397 6.8397 88.67 0.0 0.0 0.0 10.58005998161893 16.409780573583326 10.58005998161893 7.781512503836446 0 1.524227503252014 0.8860566476931632 0.9247425010840048 0.0 + + [{I|L}P]R{I|L}{M(Oxidation (M))|F}TS{I|L};[{I|L}P]R{M(Oxidation (M))|F}{I|L}TS{I|L};{[TV]|[{I|L}S]}{I|L}{[TV]|[{I|L}S]}{I|L}TS{I|L};{[TV]|[{I|L}S]}{I|L}{[TV]|[{I|L}S]}{I|L}GM{I|L} 6.8397;6.0168;5.7208;4.2424 +;-;-;- + 331 1 1.414 62462.2 1.0 13567 5808 19365 HBL1_DMSO_200M_050219_1,19377 HBL1_DMSO_200M_050219_1,19377,LPRIFTSI True True LPRIFTSI 93.145198 473.789385974407 19824872.0 19365.0 ENSG00000167085|ENST00000300408|PHB1;;ENST00000393345.8_1_17:47486298-47490626:-|nuORF;;ENST00000355202.8_1_19:38187835-38188303:-|nuORF;;nc|ENSG00000167085|P35232-2|PHB1 2.4317278067270918 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19378 93.149 182.0 299610.0 25 0 37613.0 + 26715 NYQVQFVTL 9 95 556.292822302331 1110.571091671462 2 556.2930175662041 MULTI CID FTMS 0 0 0 19365 303207.8125 0.4069683309921569 1 -0.0776443481445312 13 Unmodified _NYQVQFVTL_ ENSG00000125484|ENST00000372146|GTF3C4 50.855029805455786 0.0384952370514206 3 [YN]QVN 5 5 38.526 0.0 0.0 3.469 0.0 0.0 0.0 489.284689654137 489.284689654137 18.83294675480037 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.6307196863200843 [YN]QVN 3.469 - 418 1 1.414 50036.6 1.0 13568 5808 19365 HBL1_DMSO_200M_050219_1,19378 HBL1_DMSO_200M_050219_1,19378,NYQVQFVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19379 93.161 706.0 155280.0 25 0 39995.0 -1 EKEMWHRMFAP 11 118 739.338369110038 1476.662185286876 2 739.3389160037041 MULTI CID FTMS 0 0 0 19365 288745.625 0.997591923442513 1 -0.0776443481445312 14 Oxidation (M) _EKEMWHRM(Oxidation (M))FAP_ ENSG00000077800|ENST00000252037|FKBP6;nc|ENSG00000077800|O75344-2|FKBP6;nc|ENSG00000077800|O75344-3|FKBP6 7.101721422024254 0.8416415510090076 3 [DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]W{M(Oxidation (M))|F}{I|L}{I|L}SYQ 11 -1 + 66.485 0.0 0.0 4.5024 4.5024 74.485 0.0 0.0 0.0 26.93275963668233 5.321619065592728 5.321619065592728 2.257631809239556 0 0.0 2.0 1.0044321917401078 0.1271595765414318 [DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]W{M(Oxidation (M))|F}{I|L}{I|L}SYQ;[DV]TCC[VS]{M(Oxidation (M))|F}{I|L}{I|L}SYQ;W{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[SA]|[TG]}{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}SYQ;[DV]T[YC(Carbamidomethyl (C))]{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}SYQ;[DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]W{M(Oxidation (M))|F}{I|L}{I|L}SA[YG];[DV]TCC[VS]{M(Oxidation (M))|F}{I|L}{I|L}SA[YG];[VS]ECC[VS]{M(Oxidation (M))|F}{I|L}{I|L}SYQ;W{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[SA]|[TG]}{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}SA[YG];W{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))E]|[WC]}[MT]{I|L}SYQ;W{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[SA]|[TG]}V{[ET]|[MV]}{I|L}SYQ 4.5024;4.3495;4.0691;3.8997;3.7325;3.5834;3.5376;3.3012;3.2654;3.2209 -;-;-;-;-;-;-;-;-;- 1258 + 1 1.414 82458.0 1.0 13569 5808 19365 HBL1_DMSO_200M_050219_1,19379 HBL1_DMSO_200M_050219_1,19379,EKEMWHRMFAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19380 93.165 199.0 385890.0 25 0 41372.0 + 4495 DAYIPLQI 8 96 466.7577743737767 931.5009958143536 2 466.7579528689384 MULTI CID FTMS 0 0 0 19365 286231.5625 0.3691895058942724 -2 0.230682373046875 15 Unmodified _DAYIPLQI_ ENSG00000104872|ENST00000262265|PIH1D1;ENST00000595633.5_1_19:49949641-49950433:-|nuORF;ENST00000602076.5_1_19:49949641-49950083:-|nuORF 50.855029805455786 0.1352255786796883 3 {[DA]|[EG]}Y{I|L}P 5 3 41.171 0.0 0.0 4.4198 0.0 0.0 0.0 369.2131899884348 369.2131899884348 20.76483730104272 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}Y{I|L}P 4.4198 + + 125 1 1.414 63522.1 1.0 13570 5808 19365 HBL1_DMSO_200M_050219_1,19380 HBL1_DMSO_200M_050219_1,19380,DAYIPLQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19381 93.168 158.0 523800.0 25 0 59457.0 + 19494 LFLEKAMQL 9 107 546.8093527531676 1091.604152573135 2 546.8107787966728 MULTI CID FTMS 0 0 0 19365 281833.46875 0.0744503385001227 -2 0.230682373046875 16 Unmodified _LFLEKAMQL_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 61.357469665136826 0.0253304979873734 3 {[QN]|[E{I|L}]|[KN]}KA[YN]{I|L}{M(Oxidation (M))|F} 8 5 45.372 0.0 0.0 4.1564 0.0 0.0 0.0 110.06231842690376 110.06231842690376 18.63621890751531 0.0 0.0 0.0 0 0.805462187404089 1.0457574905606752 0.8494850021680094 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}KA[YN]{I|L}{M(Oxidation (M))|F} 4.1564 - 763 1 1.414 68034.9 1.0 13571 5808 19365 HBL1_DMSO_200M_050219_1,19381 HBL1_DMSO_200M_050219_1,19381,LFLEKAMQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19382 93.171 167.0 370020.0 25 0 40271.0 12642 GVLDPRLLVGC 11 90 571.3237399927127 1140.632927052225 2 571.3251830935478 MULTI CID FTMS 0 0 0 19365 247909.859375 0.4689552092521807 1 -0.0776443481445312 17 Unmodified _GVLDPRLLVGC_ ENSG00000120942|ENST00000376810|UBIAD1;nc|ENSG00000120942|Q9Y5Z9-2|UBIAD1 24.99096001346401 0.505407273373304 3 [VG]{I|L}{I|L}PVGD{I|L} 9 6 64.078 0.0 0.0 5.6178 0.0 0.0 0.0 274.08528911609545 274.08528911609545 49.29773596605301 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 [VG]{I|L}{I|L}PVGD{I|L} 5.6178 - 618 1 1.414 54063.0 1.0 13572 5808 19365 HBL1_DMSO_200M_050219_1,19382 HBL1_DMSO_200M_050219_1,19382,GVLDPRLLVGC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19383 93.186 800.0 209530.0 25 0 12769.0 -1 0 136 659.344430699552 1975.011462698856 3 659.6803466677666 MULTI CID FTMS 0 0 0 19365 212529.484375 0.8394546597526594 1 -0.0776443481445312 18 3 [TA]{I|L}D{I|L}{[CP]|[EA]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TT{I|L}{I|L}D 14 -1 61.532 0.0 0.0 3.1155 0.0 0.0 0.0 481.2326290409059 481.2326290409059 14.154438596220976 0.0 0.0 0.0 0 1.0 2.0 0.9337955442476158 0.0 [TA]{I|L}D{I|L}{[CP]|[EA]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TT{I|L}{I|L}D 3.1155 - 6953 1 1.414 126286.5 0.959999978542328 13573 5808 19365 HBL1_DMSO_200M_050219_1,19383 HBL1_DMSO_200M_050219_1,19383, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19384 93.191 234.0 383460.0 25 0 51100.0 + 3116 AVPEIMPEL 9 124 499.7651658010952 997.5157786689904 2 499.7650939822197 MULTI CID FTMS 0 0 0 19365 170798.59375 0.1382823888479354 -4 0.4973373413085937 19 Unmodified _AVPEIMPEL_ ENSG00000169288|ENST00000315567|MRPL1;ENST00000506674.1_1_4:78804483-78828134:+|nuORF 24.67388899826682 0.2172451872415813 3 [EP]{I|L}MPE 6 3 43.645 0.0 0.0 4.3754 0.0 0.0 0.0 298.1784733313529 298.1784733313529 28.16061246681059 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + [EP]{I|L}MPE 4.3754 + + 411 1 1.414 70609.6 1.0 13574 5808 19365 HBL1_DMSO_200M_050219_1,19384 HBL1_DMSO_200M_050219_1,19384,AVPEIMPEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19385 93.198 442.0 309000.0 25 0 36733.0 + 25205 MTPDQLMTL 9 169 525.2531206411021 1048.491688349004 2 525.2545043826103 MULTI CID FTMS 0 0 0 19365 158878.3125 1.0 0 0.0 20 Unmodified _MTPDQLMTL_ ENSG00000155393|ENST00000299192|HEATR3;nc|ENSG00000155393|Q7Z4Q2-2|HEATR3 34.10243960390752 0.1078313939113124 3 [EP]N{I|L}MTMT{I|L} 9 6 [EP]N{I|L}MT + + 25.283 18.235 2.6609 2.4113 2.4113 49.276 0.0 0.0 0.0 0.0 1.985586875339017 0.0 0.0 0 0.3807196863200844 0.0 0.6505149978319906 0.0 [EP]N{I|L}MTMT{I|L} 2.4113 - 1308 + 1 1.414 114065.4 1.0 13575 5808 19365 HBL1_DMSO_200M_050219_1,19385 HBL1_DMSO_200M_050219_1,19385,MTPDQLMTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19387 93.203 59.0 1537600.0 25 0 330020.0 + 43933 YGIPAIVKL 9 75 487.3068353895159 972.599117845832 2 487.3079711794853 MULTI CID FTMS 0 0 0 19386 1158803.375 0.66027097497731 1 -0.1176834106445312 1 Unmodified _YGIPAIVKL_ ENSG00000173801|ENST00000393931|JUP;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 39.957323273325 0.0756908302845263 3 YG{I|L}PA{I|L}VK{I|L} 9 0 + 54.105 0.0 0.0 5.5629 5.5629 88.461 0.0 0.0 0.0 21.12408785701013 12.10519062832315 12.10519062832315 14.490925311194175 0 0.7429928190999391 1.3010299956639813 0.0 0.2742275032520141 + + YG{I|L}PA{I|L}VK{I|L};YG{I|L}{I|L}[PA]VK{I|L};YG{I|L}PA{I|L}[K{I|L}]V 5.5629;4.073;3.7651 +;-;- + 129 + 1 1.414 72399.2 1.0 13576 5809 19386 HBL1_DMSO_200M_050219_1,19387 HBL1_DMSO_200M_050219_1,19387,YGIPAIVKL True True YGIPAIVKL 93.203127 487.307971179485 61871520.0 19386.0 ENSG00000173801|ENST00000393931|JUP;;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 6.110239505767822 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19388 93.205 107.0 1064600.0 25 0 242030.0 + 7428 EGLRLNLL 8 123 464.2848377219146 926.5551225106292 2 464.2849609255791 MULTI CID FTMS 0 0 0 19386 335102.65625 0.1458650909864924 2 -0.2249832153320312 2 Unmodified _EGLRLNLL_ ENST00000526748.1_1_14:75536435-75544319:+|nuORF 56.17704186161178 0.1143274477948619 3 {[DA]|[EG]}{I|L}R{I|L}N{I|L}{I|L} 8 0 + 72.644 0.0 0.0 7.8403 7.8403 93.494 0.0 0.0 0.0 25.48455006504028 51.08562371604336 25.48455006504028 9.262137858390815 0 1.6549471895720984 2.0 0.0 0.0 + + {[DA]|[EG]}{I|L}R{I|L}N{I|L}{I|L};{[DA]|[EG]}{I|L}R{I|L}GG{I|L}{I|L};{[DA]|[EG]}{I|L}N[R{I|L}]{I|L}{I|L};[{I|L}A]DR{I|L}N{I|L}{I|L};{[DA]|[EG]}{I|L}GG[R{I|L}]{I|L}{I|L};[{I|L}A]DR{I|L}GG{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[R{I|L}]AD{I|L}{I|L};{I|L}{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]}N{I|L}{I|L};{[TV]|[{I|L}S]}A[KP]W{I|L}{I|L};{[SA]|[TG]}{I|L}[KP]W{I|L}{I|L} 7.8403;6.8406;5.6673;4.9091;4.6677;3.9095;3.7653;3.4404;3.3055;3.2912 +;-;-;-;-;-;-;-;-;- + 1253 1 1.414 89385.2 1.0 13577 5809 19386 HBL1_DMSO_200M_050219_1,19388 HBL1_DMSO_200M_050219_1,19388,EGLRLNLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19389 93.207 67.0 569640.0 25 0 180540.0 -1 0 41 560.0044070397718 1676.9913917195151 3 560.0047485232353 MULTI CID FTMS 0 0 0 19386 810188.8125 0.4406278775625497 -1 0.0776443481445312 3 3 {I|L} 1 -1 11.109 0.0 0.0 0.66245 0.0 0.0 1545.8964648169745 0.0 1545.8964648169745 0.0 8.890756251918218 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.66245 - 3 + 1 1.414 37611.8 1.0 13578 5809 19386 HBL1_DMSO_200M_050219_1,19389 HBL1_DMSO_200M_050219_1,19389, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19390 93.209 78.0 967410.0 25 0 139690.0 + 861 AEVDVNQKLLL 11 95 621.3578322744459 1240.7011116156916 2 621.3597289919853 MULTI CID FTMS 0 0 0 19386 614173.6875 0.0054145219600979 11 -1.1311798095703125 4 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 34.93206674587334 0.2904649469012649 3 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L} 12 -1 + 94.511 0.0 0.0 7.6176 7.6176 84.687 0.0 0.0 0.0 8.084811649027472 10.189549981487076 8.084811649027472 2.724928274552596 0 2.524227503252014 1.6989700043360187 0.8737125054200234 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVANKG{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}E{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}EG{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}W{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVAW{I|L}{I|L}{I|L}{I|L} 7.6176;7.3979;7.3589;7.233;7.194;7.0456;7.0456;6.9719;6.9659;6.8497 -;-;-;-;-;-;-;-;-;- 8222 1 1.414 61181.0 1.0 13579 5809 19386 HBL1_DMSO_200M_050219_1,19390 HBL1_DMSO_200M_050219_1,19390,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19391 93.212 132.0 889710.0 25 0 88091.0 + 29287 QIFNGTFVKL 10 118 583.8322092769051 1165.6498656206102 2 583.8325073122978 MULTI CID FTMS 0 0 0 19386 520840.15625 0.0295144006618921 7 -0.6991348266601562 5 Unmodified _QIFNGTFVKL_ ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF 61.60191391372663 0.0323840705564037 3 [Q{I|L}]{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}VK{I|L} 10 0 + 78.651 0.0 0.0 6.7474 6.7474 81.016 0.0 0.0 0.0 20.79181246047625 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.5796896906561032 2.0 0.3494850021680094 0.9674165578762486 + + [Q{I|L}]{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}VK{I|L};[Q{I|L}]{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}V{I|L}K;[Q{I|L}]{M(Oxidation (M))|F}GGGT{M(Oxidation (M))|F}VK{I|L};[Q{I|L}]{M(Oxidation (M))|F}GGGT{M(Oxidation (M))|F}V{I|L}K;[Q{I|L}]{M(Oxidation (M))|F}NY[K{I|L}][Q{I|L}];[AG]{I|L}{M(Oxidation (M))|F}NY[K{I|L}][Q{I|L}] 6.7474;6.5963;5.9612;5.8101;1.4772;0.50343 +;-;-;-;-;- + 895 + 1 1.414 92927.0 1.0 13580 5809 19386 HBL1_DMSO_200M_050219_1,19391 HBL1_DMSO_200M_050219_1,19391,QIFNGTFVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19392 93.213 67.0 1181000.0 25 0 168680.0 + 13272 HIPDVITYL 9 100 535.7982164087542 1069.5818798843084 2 535.7982055544853 MULTI CID FTMS 0 0 0 19386 393346.09375 0.09449943869755 -9 0.9842376708984376 6 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 36.04419817259434 0.0971720506436186 3 [H{I|L}]V[DP]{I|L}T[Y{I|L}] 9 2 + 34.305 0.0 0.0 3.2073 3.2073 74.426 0.0 0.0 0.0 4.593924877592304 4.762036441594194 4.593924877592304 4.593924877592304 0 0.4247425010840047 1.5228787452803376 0.4247425010840047 0.0 [H{I|L}]V[DP]{I|L}T[Y{I|L}];[VP]D{I|L}H{I|L}T[Y{I|L}];[H{I|L}][DP]V{I|L}T[Y{I|L}];[VP]D{I|L}T[H{I|L}][Y{I|L}];[DP]V{I|L}H{I|L}T[Y{I|L}];[H{I|L}]V{[ES]|[DT]|[{I|L}C]}[{I|L}P][Y{I|L}];[VP]{[YC]|[HE]}V{I|L}T[Y{I|L}];[H{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[H{I|L}][Y{I|L}];[{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}V{I|L}T[Y{I|L}];[DP]V{I|L}T[H{I|L}][Y{I|L}] 3.2073;2.7778;2.7612;1.7361;1.6354;1.571;1.4708;1.0883;0.95571;0.59377 -;-;+;-;-;-;-;-;-;- + 365 1 1.414 67597.1 1.0 13581 5809 19386 HBL1_DMSO_200M_050219_1,19392 HBL1_DMSO_200M_050219_1,19392,HIPDVITYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19393 93.215 92.0 675140.0 25 0 55827.0 + 2368 AQLSDMDLINV 11 97 609.806585883578 0 609.8063842654228 PEAK CID FTMS 0 0 0 19386 340584.21875 0.6442603714694443 1 -0.1176834106445312 7 Unmodified _AQLSDMDLINV_ ENSG00000112029|ENST00000229758|FBXO5;nc|ENSG00000112029|Q9UKT4-2|FBXO5 19.361941925380144 0.3610768343261827 3 TAPEDV{M(Oxidation (M))|F} 7 10 23.62 0.0 0.0 1.9399 0.0 0.0 112.03019962838272 343.19855676822505 455.22875639660776 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TAPEDV{M(Oxidation (M))|F} 1.9399 - 221 + 1 1.414 48441.3 1.0 13582 5809 19386 HBL1_DMSO_200M_050219_1,19393 HBL1_DMSO_200M_050219_1,19393,AQLSDMDLINV False True AQLSDMDLINV 93.215147 609.806384265423 3599898.5 19386.0 ENSG00000112029|ENST00000229758|FBXO5;;nc|ENSG00000112029|Q9UKT4-2|FBXO5 3.015014410018921 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19394 93.222 375.0 412830.0 25 0 61922.0 + 3181 AVVLPLARI 9 104 476.3211978037891 950.6278426743784 2 476.3211242556572 MULTI CID FTMS 0 0 0 19386 313996.375 0.0781108923787392 5 -0.5386962890625 8 Unmodified _AVVLPLARI_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 42.09456458481378 0.0639583784996157 3 {[VA]|[{I|L}G]}{I|L}V{I|L}[VS]VT 9 6 63.082 0.0 0.0 6.6358 0.0 0.0 0.0 66.03569971256093 66.03569971256093 39.66067799904572 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.7302046884880937 0.0 {[VA]|[{I|L}G]}{I|L}V{I|L}[VS]VT 6.6358 - 422 + 1 1.414 120363.8 1.0 13583 5809 19386 HBL1_DMSO_200M_050219_1,19394 HBL1_DMSO_200M_050219_1,19394,AVVLPLARI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19395 93.228 355.0 782220.0 25 0 86462.0 -1 0 145 926.9344493233524 1851.8543457135047 2 927.4379760622978 MULTI CID FTMS 0 0 0 19386 300587.0 0.4227503978839063 -1 0.0776443481445312 9 3 {[SA]|[TG]}VKY{M(Oxidation (M))|F}ANQQ[YN]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 15 -1 + 80.984 0.0 0.0 4.3731 4.3731 76.882 0.0 0.0 0.0 42.08338422682712 0.857921019231938 0.857921019231938 4.0823996531185 0 0.0 0.0 0.0 1.1421590589602533 {[SA]|[TG]}VKY{M(Oxidation (M))|F}ANQQ[YN]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};{[SA]|[TG]}VKY{M(Oxidation (M))|F}ANQQAE[HS]C(Carbamidomethyl (C)){I|L};{[SA]|[TG]}VKY{M(Oxidation (M))|F}ANQ[AG][YN]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};{[SA]|[TG]}VKY{M(Oxidation (M))|F}AN[AG]Q[YN]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};{[SA]|[TG]}VKY{M(Oxidation (M))|F}AGGQQ[YN]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};{[SA]|[TG]}VKY{M(Oxidation (M))|F}ANQQ[YN]{M(Oxidation (M))|F}[CG]{I|L};KKEY{M(Oxidation (M))|F}ANQQ[YN]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};{[SA]|[TG]}VKY{M(Oxidation (M))|F}ANQQAE[HS][CG]{I|L};{[SA]|[TG]}VKY{M(Oxidation (M))|F}AN[AG]QAE[HS]C(Carbamidomethyl (C)){I|L};{[SA]|[TG]}VKY{M(Oxidation (M))|F}ANQ[AG]AE[HS]C(Carbamidomethyl (C)){I|L} 4.3731;4.1527;3.8855;3.8855;3.8855;3.8855;3.8493;3.6659;3.6659;3.6659 -;-;-;-;-;-;-;-;-;- 6751 + 1 1.414 181994.6 1.0 13584 5809 19386 HBL1_DMSO_200M_050219_1,19395 HBL1_DMSO_200M_050219_1,19395, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19396 93.231 142.0 279050.0 25 0 30376.0 + 10565 FVIDLQTRL 9 52 552.8240295520234 1103.6335061708469 2 552.8248168826103 MULTI CID FTMS 0 0 0 19386 285885.21875 0.1514510137385727 -3 0.3083267211914062 10 Unmodified _FVIDLQTRL_ ENSG00000131051|ENST00000253363|RBM39;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;nc|ENSG00000131051|Q14498-3|RBM39 29.84058131909904 0.1515068451768857 3 V{[VA]|[{I|L}G]}Q{I|L}D{I|L}VE 9 7 48.862 0.0 0.0 4.4273 0.0 0.0 119.0739002912125 0.0 119.0739002912125 0.0 36.09747782948258 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{[VA]|[{I|L}G]}Q{I|L}D{I|L}VE 4.4273 - 74 1 1.414 39226.4 1.0 13585 5809 19386 HBL1_DMSO_200M_050219_1,19396 HBL1_DMSO_200M_050219_1,19396,FVIDLQTRL False True FVIDLQTRL 93.231174 552.82481688261 71725600.0 19386.0 ENST00000492779.5_1_20:34292405-34320086:-|nuORF;;nc|ENSG00000131051|Q14498-3|RBM39;;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;;ENSG00000131051|ENST00000253363|RBM39;;ENST00000429968.5_1_20:34292405-34322136:-|nuORF 5.549662113189697 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19397 93.239 443.0 354510.0 25 0 16536.0 -1 0 163 939.958153312286 1877.901753691372 2 939.9597045779228 MULTI CID FTMS 0 0 0 19386 247463.75 0.5751638658184371 2 -0.2249832153320312 11 3 [NP]N{I|L}{I|L}T[C(Carbamidomethyl (C))D]{M(Oxidation (M))|F}TGNV 13 -1 62.003 0.0 0.0 3.3017 0.0 0.0 0.0 429.23417647881473 429.23417647881473 15.475441195729374 0.0 0.0 0.0 0 0.5 0.0 0.3054621874040891 2.3818108876706967 [NP]N{I|L}{I|L}T[C(Carbamidomethyl (C))D]{M(Oxidation (M))|F}TGNV 3.3017 - 8061 1 1.414 105172.8 1.0 13586 5809 19386 HBL1_DMSO_200M_050219_1,19397 HBL1_DMSO_200M_050219_1,19397, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19398 93.245 323.0 477650.0 25 0 114740.0 27804 PLPQSLSLL 9 144 484.29439595747687 966.5742389817538 2 484.2935668826103 MULTI CID FTMS 0 0 0 19386 244108.4375 0.5333262418615632 -3 0.3083267211914062 12 Unmodified _PLPQSLSLL_ ENST00000591445.1_1_17:67501802-67515615:+|nuORF 49.93300154707207 0.0405168250806675 3 [{I|L}P]QPSS{I|L}{I|L}{I|L} 9 3 + 85.544 0.0 0.0 8.8502 8.8502 94.314 0.0 0.0 0.0 17.69885770684617 16.478174818886373 16.478174818886373 9.208187539523747 0 0.6861818737241735 1.6989700043360187 1.610924374808178 0.0 [{I|L}P]QPSS{I|L}{I|L}{I|L};[{I|L}P][AG]PSS{I|L}{I|L}{I|L};[{I|L}P]QSPS{I|L}{I|L}{I|L};[Q{I|L}]PPSS{I|L}{I|L}{I|L};[{I|L}P]QP{I|L}{[CA]|SS}{I|L}{I|L};[AG]PP{I|L}SS{I|L}{I|L}{I|L};[{I|L}P]QSSP{I|L}{I|L}{I|L};[{I|L}P]{I|L}QP{[CA]|SS}{I|L}{I|L};[{I|L}P][AG]SPS{I|L}{I|L}{I|L};[QP]P{I|L}SS{I|L}{I|L}{I|L} 8.8502;7.8976;7.8157;7.0191;7.0113;6.9773;6.9718;6.9704;6.863;6.6986 -;-;-;-;-;-;-;-;-;- 1532 1 1.414 117739.0 1.0 13587 5809 19386 HBL1_DMSO_200M_050219_1,19398 HBL1_DMSO_200M_050219_1,19398,PLPQSLSLL True True QIPLLVQGV 93.244941 484.29356688261 2470173.75 19386.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 3.347736358642578 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19399 93.248 139.0 633970.0 25 0 50627.0 19533 LFPMPRVIY 9 96 568.3206792616899 1134.6268055901796 2 568.3202392458916 MULTI CID FTMS 0 0 0 19386 216538.984375 0.4108008058972976 -3 0.3083267211914062 13 Unmodified _LFPMPRVIY_ ENSG00000013293|ENST00000231706|SLC7A14 23.1484247019978 0.2366544122328345 3 MP{[QN]|[E{I|L}]|[KN]} 4 6 20.005 0.0 0.0 1.7631 0.0 0.0 646.3806350165605 0.0 646.3806350165605 0.0 7.530834337684311 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 MP{[QN]|[E{I|L}]|[KN]} 1.7631 - 104 1 1.414 74474.4 1.0 13588 5809 19386 HBL1_DMSO_200M_050219_1,19399 HBL1_DMSO_200M_050219_1,19399,LFPMPRVIY False True IFPMPRVIY 93.24776 568.320239245892 40382204.0 19386.0 nc|ENSG00000003989|P52569-3|SLC7A2;;ENSG00000003989|ENST00000494857|SLC7A2 4.843100706736247 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19400 93.259 654.0 294170.0 25 0 34324.0 + 1933 AMIRLLSI 8 135 458.7859699083643 915.5573868835286 2 458.7858764529228 MULTI CID FTMS 0 0 0 19386 181581.84375 0.1119551035800006 -3 0.3083267211914062 14 Unmodified _AMIRLLSI_ REV__L1PA10_dup4980|chr11:35097301-35097836:+|1.220344252307297|0.0480148522199164|4.67|48.0|18|1|anti-sense 67.34385681178166 0.1158486345035644 3 MA{I|L} 3 -1 39.526 0.0 0.0 4.3171 0.0 0.0 0.0 597.3732613633573 597.3732613633573 7.004055774956157 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 MA{I|L} 4.3171 - 297 + 1 1.414 153024.2 1.0 13589 5809 19386 HBL1_DMSO_200M_050219_1,19400 HBL1_DMSO_200M_050219_1,19400,AMIRLLSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19401 93.274 800.0 256610.0 25 0 28492.0 + 10277 FQYESKVFYL 10 191 662.3342952504288 1322.6540375676575 2 662.3334228396416 MULTI CID FTMS 0 0 0 19386 161727.78125 0.3221894586118612 2 -0.2249832153320312 15 Unmodified _FQYESKVFYL_ ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF 45.739877483867886 0.1051543674217965 3 [KS]EYV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L} 10 7 + 44.747 0.0 0.0 3.3831 3.3831 70.455 0.0 0.0 0.0 1.7443087374934692 3.9215905896025305 1.7443087374934692 1.7443087374934692 0 0.5682503180159344 0.0 1.5645152305677 0.3576565225962385 [KS]EYV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L};[YE]SKV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L};{[TV]|[{I|L}S]}[SG]YV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L};[KS]EYV{M(Oxidation (M))|F}Q[Y{I|L}]{M(Oxidation (M))|F};[KS]EVY{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L};[KS]VEY{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L};[YE]SKV{M(Oxidation (M))|F}Q[Y{I|L}]{M(Oxidation (M))|F};[VS]KEY{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L};{[TV]|[{I|L}S]}[SG]YV{M(Oxidation (M))|F}Q[Y{I|L}]{M(Oxidation (M))|F};[{I|L}T][QT]Y{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L} 3.3831;3.2513;3.1508;3.0866;3.0224;3.0021;2.9548;2.9223;2.8543;2.8485 -;-;-;-;-;-;-;-;-;- 4386 1 1.414 152836.0 0.7300000190734863 13590 5809 19386 HBL1_DMSO_200M_050219_1,19401 HBL1_DMSO_200M_050219_1,19401,FQYESKVFYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19402 93.279 233.0 295670.0 25 0 56257.0 -1 0 69 379.7498871729025 757.485221412605 2 379.7495300173759 MULTI CID FTMS 0 0 0 19386 133761.421875 0.6063524730516694 -1 0.0776443481445312 16 3 {I|L}P{I|L}R{I|L}{M(Oxidation (M))|F} 6 -1 + 56.955 0.0 0.0 7.519 7.519 96.483 0.0 0.0 0.0 43.85615093082315 6.950010276180336 6.950010276180336 56.95509472226512 0 0.6989700043360187 2.0 0.0 0.0 {I|L}P{I|L}R{I|L}{M(Oxidation (M))|F} 7.519 - 24 + 1 1.414 62485.8 1.0 13591 5809 19386 HBL1_DMSO_200M_050219_1,19402 HBL1_DMSO_200M_050219_1,19402, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19403 93.284 284.0 303280.0 25 0 31402.0 + 35831 SVLDDNKLLTL 11 110 615.8511100545097 1229.6876671758191 2 615.8514282107353 MULTI CID FTMS 0 0 0 19386 120495.265625 0.0099600265389341 8 -0.7210311889648438 17 Unmodified _SVLDDNKLLTL_ ENSG00000197102|ENST00000360184|DYNC1H1 46.0223103267499 0.1396584557920269 3 [VS]{I|L}DD 5 6 43.416 0.0 0.0 3.5307 0.0 0.0 0.0 697.4254244440061 697.4254244440061 3.4485598504726127 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.4247425010840047 0.0 + [VS]{I|L}DD 3.5307 + + 732 + 1 1.414 68571.3 1.0 13592 5809 19386 HBL1_DMSO_200M_050219_1,19403 HBL1_DMSO_200M_050219_1,19403,SVLDDNKLLTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19404 93.298 800.0 280170.0 25 0 70781.0 + -1 SLVDEFKEL 9 122 1079.5628002634226 0 1079.565722644329 PEAK CID FTMS 0 0 0 19386 126769.015625 1.0 0 0.0 18 ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6;ENST00000478914.1_1_22:42052971-42057696:+|nuORF 3 {I|L}EK{M(Oxidation (M))|F}EDV 7 -1 42.057 0.0 0.0 1.9497 0.0 0.0 1096.565955896183 197.0938204401 1293.659776336283 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7856668758921828 0.0 {I|L}EK{M(Oxidation (M))|F}EDV 1.9497 - 3409 + 1 1.414 146242.2 0.7900000214576721 13593 5809 19386 HBL1_DMSO_200M_050219_1,19404 HBL1_DMSO_200M_050219_1,19404, False False SLVDEFKEL 93.297616 1079.56572264433 59487068.125 19386.0 ENSG00000196419|ENST00000360079|XRCC6;;nc|ENSG00000196419|P12956-2|XRCC6;;ENST00000478914.1_1_22:42052971-42057696:+|nuORF 7.603945255279541 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19405 93.303 199.0 498230.0 25 0 59087.0 + 43185 VYWDYMKAI 9 121 594.7932153869003 1187.5718778406006 2 594.7958251833916 MULTI CID FTMS 0 0 0 19386 111167.390625 1.0 0 0.0 19 Unmodified _VYWDYMKAI_ ENSG00000103222|ENST00000399410|ABCC1;nc|ENSG00000103222|P33527-2|ABCC1;nc|ENSG00000103222|P33527-3|ABCC1;nc|ENSG00000103222|P33527-4|ABCC1;nc|ENSG00000103222|P33527-5|ABCC1;nc|ENSG00000103222|P33527-6|ABCC1;nc|ENSG00000103222|P33527-7|ABCC1;nc|ENSG00000103222|P33527-8|ABCC1;nc|ENSG00000103222|P33527-9|ABCC1 30.63653989081413 0.1413794767160703 3 [YV]WDYMKA{I|L} 9 0 + 39.777 0.0 0.0 3.3495 3.3495 69.133 0.0 0.0 0.0 0.917921022988395 0.917921022988395 0.917921022988395 0.917921022988395 0 0.5866968715561641 2.0 0.0 0.0 + + [YV]WDYMKA{I|L};[YV]W[NS]{M(Oxidation (M))|F}P[Y{I|L}];[YV][KC]DDAV[Y{I|L}];[YV]EG[NS]{M(Oxidation (M))|F}P[Y{I|L}];[YV][KC]DWV[Y{I|L}];[YV]{[DA]|[EG]}DYMKA{I|L};[YV]WDY[KA]M{I|L};[YV]W[WC(Carbamidomethyl (C))]V[Y{I|L}];[YV]W[NP]HEM{I|L};[YV][KC]T{[CP]|[EA]}V[Y{I|L}] 3.3495;3.2722;3.0833;3.0187;2.7867;2.5741;2.5284;2.4732;2.4365;2.4131 +;-;-;-;-;-;-;-;-;- + 556 + 1 1.414 81658.5 1.0 13594 5809 19386 HBL1_DMSO_200M_050219_1,19405 HBL1_DMSO_200M_050219_1,19405,VYWDYMKAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19406 93.316 800.0 44028.0 25 0 2220.7 -1 0 74 1121.208178699017 0 1121.208178699017 PEAK CID FTMS 0 0 0 -1 0 20 3 M 1 -1 2.7642 0.0 0.0 0.12338 0.0 0.0 1315.9670957070364 790.3822115533811 2106.3493072604174 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.12338 - 4 + 1 1.414 30845.0 0.800000011920929 13595 5809 19386 HBL1_DMSO_200M_050219_1,19406 HBL1_DMSO_200M_050219_1,19406, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19408 93.321 65.0 846440.0 25 0 112700.0 + 29583 QLTEMLPSI 9 105 516.2755426730707 1030.5365324129414 2 516.2759277224541 MULTI CID FTMS 0 0 0 19407 491369.9375 0.4517982294981655 2 -0.1951217651367187 1 Unmodified _QLTEMLPSI_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 49.93300154707207 0.0405168250806675 3 [VS]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[DP]PS{I|L} 10 6 + 28.394 0.0 0.0 2.7553 2.7553 66.552 0.0 0.0 0.0 0.1350591719164349 10.855923464746676 0.1350591719164349 0.1350591719164349 0 0.3807196863200844 0.0 0.872363747448347 0.0 [VS]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[DP]PS{I|L};{NN|[MP]|[D{I|L}]|[EV]}EGAV{I|L}{M(Oxidation (M))|F}[PA];{NN|[MP]|[D{I|L}]|[EV]}EQV{I|L}{M(Oxidation (M))|F}[PA];{NN|[MP]|[D{I|L}]|[EV]}EAGV{I|L}{M(Oxidation (M))|F}[PA];{NN|[MP]|[D{I|L}]|[EV]}EG{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[PA];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}GAV{I|L}{M(Oxidation (M))|F}[PA];{[VA]|[{I|L}G]}EEGV{I|L}{M(Oxidation (M))|F}[PA];{[QN]|[E{I|L}]|[KN]}DGAV{I|L}{M(Oxidation (M))|F}[PA];[{I|L}A]DDAV{I|L}{M(Oxidation (M))|F}[PA];{NN|[MP]|[D{I|L}]|[EV]}EAV{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[PA] 2.7553;2.7422;2.4005;2.3561;2.0954;1.9546;1.9527;1.8333;1.7837;1.7093 -;-;-;-;-;-;-;-;-;- 895 + 1 1.416 49271.4 1.0 13596 5810 19407 HBL1_DMSO_200M_050219_1,19408 HBL1_DMSO_200M_050219_1,19408,QLTEMLPSI True True QLTEMLPSI 93.321482 516.275927722454 10606189.0 19407.0 nc|ENSG00000145741|P20290-2|BTF3;;ENSG00000145741|ENST00000380591|BTF3 0.4692496657371521 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19409 93.323 60.0 885520.0 25 0 106500.0 + 9885 FPFPTPPSV 9 83 494.7607669353666 987.5069809375332 2 494.7608825564384 MULTI CID FTMS 0 0 0 19407 677990.5 0.9125677516179208 -2 0.1953277587890625 2 Unmodified _FPFPTPPSV_ ENSG00000150990|ENST00000308736|DHX37 44.40701690623563 0.0526327925666318 3 PPSV 4 5 26.551 0.0 0.0 2.6887 0.0 0.0 589.2888826501996 0.0 589.2888826501996 0.0 -0.4776398858437858 -0.4776398858437858 0.0 0 0.5 0.0 0.9247425010840048 0.0 + PPSV 2.6887 + + 227 + 1 1.416 45100.1 1.0 13597 5810 19407 HBL1_DMSO_200M_050219_1,19409 HBL1_DMSO_200M_050219_1,19409,FPFPTPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19410 93.324 16.0 3449000.0 25 0 313010.0 + 4552 DAYQVLSTL 9 78 505.2638250157652 1008.5130970983304 2 505.2640563845634 MULTI CID FTMS 0 0 0 19407 3688829.75 1.0 0 0.0 3 Unmodified _DAYQVLSTL_ ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2 41.8396318013385 0.0653578398400075 3 {[DA]|[EG]}YQV 5 4 34.679 0.0 0.0 3.4387 0.0 0.0 0.0 429.2337917102413 429.2337917102413 9.13303128443836 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}YQV 3.4387 + + 207 1 1.416 45931.1 1.0 13598 5810 19407 HBL1_DMSO_200M_050219_1,19410 HBL1_DMSO_200M_050219_1,19410,DAYQVLSTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19411 93.325 27.0 1749400.0 25 0 204560.0 15770 ISDVVNYFLSV 11 67 628.3322460396369 1254.6499391460736 2 628.3325073122978 MULTI CID FTMS 0 0 0 19407 1792689.25 0.3568354949044593 -2 0.1953277587890625 4 Unmodified _ISDVVNYFLSV_ ENST00000368468.3_1_6:119499937-119500069:-|nuORF 41.95555342248728 0.1822715950200113 3 K{M(Oxidation (M))|F}SV{M(Oxidation (M))|F}{I|L}W 7 8 62.255 0.0 0.0 4.962 0.0 0.0 329.1223316876969 0.0 329.1223316876969 0.0 45.34395415117551 0.0 0.0 0 0.8807196863200843 0.0 0.7742275032520141 0.0 K{M(Oxidation (M))|F}SV{M(Oxidation (M))|F}{I|L}W 4.962 - 489 1 1.416 43478.1 1.0 13599 5810 19407 HBL1_DMSO_200M_050219_1,19411 HBL1_DMSO_200M_050219_1,19411,ISDVVNYFLSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19412 93.326 36.0 1654000.0 25 0 304590.0 + 12605 GVIQDFINA 9 94 488.75856071538567 975.5025684975714 2 488.7588683962822 MULTI CID FTMS 0 0 0 19407 1582735.375 1.0 0 0.0 5 Unmodified _GVIQDFINA_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 26.88365393820708 0.1891292719743517 3 [VG]AE{M(Oxidation (M))|F}R 6 6 27.211 0.0 0.0 2.7894 0.0 0.0 0.0 313.1501159062372 313.1501159062372 6.5268632215756455 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VG]AE{M(Oxidation (M))|F}R 2.7894 - 634 1 1.416 50626.9 1.0 13600 5810 19407 HBL1_DMSO_200M_050219_1,19412 HBL1_DMSO_200M_050219_1,19412,GVIQDFINA False True GVIQDFINA 93.326497 488.758868396282 11442571.0 19407.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 3.250426769256592 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19413 93.328 42.0 1764400.0 25 0 143110.0 + 5644 DPFAFIHKI 9 86 544.3002364449206 1086.5859199566412 2 544.3005859255791 MULTI CID FTMS 0 0 0 19407 1241546.75 0.0821727816401612 -4 0.4260101318359375 6 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 53.832793166522166 0.0319663582346103 3 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L} 9 0 + 91.448 0.0 0.0 8.4161 8.4161 97.212 0.0 0.0 0.0 65.0041864435717 11.137954815419008 11.137954815419008 27.25772496747986 0 1.6989700043360187 2.0 0.0 0.2396518287104437 + + DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L};D{I|L}MA{M(Oxidation (M))|F}{I|L}HK{I|L};D{I|L}[WY]{I|L}HK{I|L} 8.4161;5.9075;3.0809 +;-;- + 264 + 1 1.416 60984.4 1.0 13601 5810 19407 HBL1_DMSO_200M_050219_1,19413 HBL1_DMSO_200M_050219_1,19413,DPFAFIHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19414 93.329 56.0 933150.0 25 0 105110.0 + 4445 DAWQDGAVLQI 11 80 608.3036066191661 1214.592660305132 2 608.3041869997978 MULTI CID FTMS 0 0 0 19407 1090318.25 1.0 0 0.0 7 Unmodified _DAWQDGAVLQI_ ENSG00000174840|ENST00000311180|PDE12;nc|ENSG00000174840|Q6L8Q7-2|PDE12 38.61474834105838 0.2337350513322792 3 [AG]WDADQV 8 6 44.78 0.0 0.0 3.6868 0.0 0.0 0.0 369.2148276237446 369.2148276237446 25.5936079116576 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.8494850021680094 0.0 [AG]WDADQV 3.6868 - 412 1 1.416 42860.6 1.0 13602 5810 19407 HBL1_DMSO_200M_050219_1,19414 HBL1_DMSO_200M_050219_1,19414,DAWQDGAVLQI False True DAWQDGAVLQI 93.329122 608.304186999798 8846278.0 19407.0 nc|ENSG00000174840|Q6L8Q7-2|PDE12;;ENSG00000174840|ENST00000311180|PDE12 6.860195795694987 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19415 93.331 62.0 1079200.0 25 0 110740.0 + 30098 QVFPGLLERV 10 91 579.8420521051584 1157.6695512771166 2 579.3378784060478 MULTI CID FTMS 0 0 0 19407 656243.8125 0.7391116216895406 -3 0.3421783447265625 8 Unmodified _QVFVHFIRL_ nc|ENSG00000130638|Q9UBB4-2|ATXN10;ENSG00000130638|ENST00000252934|ATXN10;ENST00000483549.5_1_22:46114317-46136469:+|nuORF 18.13498045792455 0.3457906370836843 3 {M(Oxidation (M))|F}PG{I|L}{I|L}E[RV] 8 7 36.999 0.0 0.0 3.1959 0.0 0.0 228.13375040142665 0.0 228.13375040142665 0.0 4.819268612305841 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}PG{I|L}{I|L}E[RV] 3.1959 - 99 + 1 1.416 55720.2 1.0 13603 5810 19407 HBL1_DMSO_200M_050219_1,19415 HBL1_DMSO_200M_050219_1,19415,QVFVHFIRL False False QVFPGLLERV 93.330647 579.337878406048 87015880.0 19407.0 nc|ENSG00000130638|Q9UBB4-2|ATXN10;;ENSG00000130638|ENST00000252934|ATXN10;;ENST00000483549.5_1_22:46114317-46136469:+|nuORF 7.773125807444255 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19416 93.333 116.0 603640.0 25 0 48205.0 + 38000 TNSIYQQHCS 10 102 590.753619074688 1179.492685216176 2 590.7549926638603 MULTI CID FTMS 0 0 0 19407 629200.5 0.9912113165302512 2 -0.1951217651367187 9 Unmodified _TNSIYQQHCS_ REV__ENST00000217515.10_2_18:54291621-54293598:-|nuORF 9.38312468134398 0.6832340498775793 3 {[QS]|[NT]}Y 3 -1 22.56 0.0 0.0 1.9127 0.0 0.0 0.0 798.3149868121321 798.3149868121321 6.154291878782857 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.2396518287104437 0.3252574989159953 {[QS]|[NT]}Y 1.9127 - 327 1 1.416 57217.8 1.0 13604 5810 19407 HBL1_DMSO_200M_050219_1,19416 HBL1_DMSO_200M_050219_1,19416,TNSIYQQHCS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19417 93.336 119.0 535160.0 25 0 102570.0 -1 0 87 565.6799718291395 1694.0180860876185 3 565.6799804568291 MULTI CID FTMS 0 0 0 19407 532224.8125 1.0 0 0.0 10 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RYSN{I|L}A 8 -1 17.344 0.0 0.0 1.0239 0.0 0.0 0.0 726.4816840702935 726.4816840702935 2.3957751657678763 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RYSN{I|L}A 1.0239 - 348 1 1.416 53609.0 1.0 13605 5810 19407 HBL1_DMSO_200M_050219_1,19417 HBL1_DMSO_200M_050219_1,19417, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19418 93.339 156.0 636620.0 25 0 75119.0 + 29474 QLIPAVPGI 9 109 454.2839022856863 906.5532516381726 2 454.2842895388603 MULTI CID FTMS 0 0 0 19407 341248.3125 0.7353655966932089 -2 0.1953277587890625 11 Unmodified _QLIPAVPGI_ ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160 44.40701690623563 0.0526327925666318 3 [PG]{I|L}Q{I|L}{I|L} 6 7 35.824 0.0 0.0 3.9517 0.0 0.0 0.0 282.14533743939813 282.14533743939813 15.585456211725202 0.0 0.0 0.0 0 0.5 0.9208187539523752 0.0 0.2742275032520141 [PG]{I|L}Q{I|L}{I|L} 3.9517 - 1059 1 1.416 82201.7 1.0 13606 5810 19407 HBL1_DMSO_200M_050219_1,19418 HBL1_DMSO_200M_050219_1,19418,QLIPAVPGI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19419 93.341 100.0 603570.0 25 0 54566.0 + 7977 ELVRFLPAV 9 100 522.3156005128981 0 522.3158447146416 PEAK CID FTMS 0 0 0 19407 333852.0625 0.7566786579151094 -2 0.1953277587890625 12 Unmodified _ELVRFLPAV_ ENSG00000111641|ENST00000322166|NOP2;ENST00000542015.1_1_12:6669877-6677084:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 65.23502041540118 0.0134875362242201 3 AE 2 8 12.083 0.0 0.0 1.1589 0.0 0.0 757.4473890938469 82.06698785953358 839.5143769533805 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.2887254899964357 0.0 AE 1.1589 - 118 + 1 1.416 53421.0 1.0 13607 5810 19407 HBL1_DMSO_200M_050219_1,19419 HBL1_DMSO_200M_050219_1,19419,ELVRFLPAV True True ELVRFLPAV 93.340797 522.315844714642 3981546.75 19407.0 ENST00000542015.1_1_12:6669877-6677084:-|nuORF;;ENSG00000111641|ENST00000322166|NOP2;;nc|ENSG00000111641|P46087-2|NOP2;;nc|ENSG00000111641|P46087-4|NOP2;;nc|ENSG00000111641|P46087-3|NOP2 6.967316786448161 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19420 93.347 317.0 325420.0 25 0 35675.0 + 1727 ALPSFYCDFTK 11 139 646.3077873512005 1290.601021769201 2 646.8133422732353 MULTI CID FTMS 0 0 0 19407 285462.65625 1.0 0 0.0 13 Unmodified _ALPSFYCDFTK_ REV__ENSG00000120334|ENST00000682279|CENPL;REV__nc|ENSG00000120334|Q8N0S6-2|CENPL 11.494710602746466 0.7960433852372589 3 [{I|L}A]{[DA]|[EG]}D{I|L}[MD]{I|L}{M(Oxidation (M))|F}[PA] 12 -1 + 39.948 0.0 0.0 3.0953 3.0953 71.15 0.0 0.0 0.0 2.3696681582135426 15.510592250701606 2.3696681582135426 2.4865124202832334 0 0.9247425010840048 1.6989700043360187 0.6139829889124311 0.0 [{I|L}A]{[DA]|[EG]}D{I|L}[MD]{I|L}{M(Oxidation (M))|F}[PA];[{I|L}A]{[DA]|[EG]}D{I|L}[MD]{M(Oxidation (M))|F}{I|L}[PA];{[QN]|[E{I|L}]|[KN]}QD{I|L}[MD]{I|L}{M(Oxidation (M))|F}[PA];[{I|L}A]{I|L}DW[MD]{I|L}{M(Oxidation (M))|F}[PA];{[QN]|[E{I|L}]|[KN]}QD{I|L}[MD]{M(Oxidation (M))|F}{I|L}[PA];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}{I|L}[MD]{I|L}{M(Oxidation (M))|F}[PA];[{I|L}A]{I|L}DW[MD]{M(Oxidation (M))|F}{I|L}[PA];[{I|L}A]{[DA]|[EG]}D{I|L}A[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}[PA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D{I|L}{I|L}[MD]{I|L}{M(Oxidation (M))|F}[PA];[DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L}{I|L}S[YQ] 3.0953;2.9026;2.8426;2.8344;2.65;2.6441;2.6417;2.5537;2.5424;2.5134 -;-;-;-;-;-;-;-;-;- 2192 1 1.416 84276.5 1.0 13608 5810 19407 HBL1_DMSO_200M_050219_1,19420 HBL1_DMSO_200M_050219_1,19420,ALPSFYCDFTK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19421 93.36 800.0 285500.0 25 0 73060.0 + 27644 PLGSPLLL 8 167 405.2603300278034 808.5061071224068 2 405.2603942751884 MULTI CID FTMS 0 0 0 19407 259436.8125 0.5528171876925867 14 -1.4631729125976562 14 Unmodified _PLGSPLLL_ ENST00000537708.1_1_12:6669555-6669804:-|nuORF 59.79521254764295 0.1151759508933577 3 [{I|L}P][SG]P{I|L}{I|L}{I|L} 8 0 + 57.968 0.0 0.0 7.1697 7.1697 86.856 0.0 0.0 0.0 8.45098040014257 14.024174299985006 8.45098040014257 4.898320881344631 0 0.3807196863200844 2.0 1.1307196863200843 0.0 + + [{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P]EKP{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L};[EP]KP{I|L}{I|L}{I|L};[{I|L}P]{I|L}[SG]P{I|L}{I|L};[EP]K{I|L}P{I|L}{I|L};{[HG]|PP}GS{I|L}{I|L}{I|L}{I|L};[KP]EP{I|L}{I|L}{I|L};[EP]{I|L}KP{I|L}{I|L};[KP]E{I|L}P{I|L}{I|L} 7.1697;6.5639;6.1845;6.1245;5.192;5.1392;5.1203;4.9344;4.3646;3.9491 +;-;-;-;-;-;-;-;-;- + 305 1 1.416 179136.8 0.8799999952316284 13609 5810 19407 HBL1_DMSO_200M_050219_1,19421 HBL1_DMSO_200M_050219_1,19421,PLGSPLLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19422 93.363 153.0 536160.0 25 0 45215.0 + 20339 VVPPFLQPEV 10 113 562.8217095206476 1123.628866108095 2 562.8223754763603 MULTI CID FTMS 0 0 0 19407 229153.640625 0.4838327871210466 -2 0.1953277587890625 15 Unmodified _LLFLFFPEV_ P02666 26.268140514670165 0.1969607489560049 3 VVP{M(Oxidation (M))|F}VQ{I|L}[HS]V 10 8 + 60.155 0.0 0.0 5.3537 5.3537 87.319 0.0 0.0 0.0 30.312346841520743 7.403405327429411 7.403405327429411 12.698405410982616 0 0.3054621874040891 2.0 0.0 0.4247425010840047 VVP{M(Oxidation (M))|F}VQ{I|L}[HS]V;VVP{M(Oxidation (M))|F}QV{I|L}[HS]V;{I|L}{[ET]|[MV]}VVQ{I|L}[HS]V;VVP{M(Oxidation (M))|F}V[AG]{I|L}[HS]V;{I|L}{M(Oxidation (M))|F}{I|L}[PA]Q{I|L}[HS]V;VVP{M(Oxidation (M))|F}[AG]V{I|L}[HS]V;{I|L}{M(Oxidation (M))|F}{I|L}Q[PA]{I|L}[HS]V;{I|L}{[ET]|[MV]}VQV{I|L}[HS]V;VVWWV{I|L}[HS]V;{I|L}{M(Oxidation (M))|F}{I|L}[KG]{I|L}WT{M(Oxidation (M))|F} 5.3537;4.2235;4.1715;4.16;3.7265;3.4079;3.0806;3.0414;2.9339;2.24 -;-;-;-;-;-;-;-;-;- 625 + 1 1.416 70517.6 1.0 13610 5810 19407 HBL1_DMSO_200M_050219_1,19422 HBL1_DMSO_200M_050219_1,19422,LLFLFFPEV False False VVPPFLQPEV 93.363465 562.82237547636 4244695.5 19407.0 P02666 6.148622353871663 2.0 False 10.0 True unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19423 93.375 675.0 257460.0 25 0 24759.0 -1 0 142 1069.5049697330942 2136.9953865329885 2 1069.505908191204 MULTI CID FTMS 0 0 0 19407 210203.609375 1.0 0 0.0 16 3 {NN|[MP]|[D{I|L}]|[EV]}TA{I|L}TQY 8 -1 63.503 0.0 0.0 2.9716 0.0 0.0 0.0 1228.521911761757 1228.521911761757 24.402497250776435 0.0 0.0 0.0 0 1.0 1.5228787452803376 2.385151878060192 0.0 {NN|[MP]|[D{I|L}]|[EV]}TA{I|L}TQY 2.9716 - 45502 1 1.416 109576.5 1.0 13611 5810 19407 HBL1_DMSO_200M_050219_1,19423 HBL1_DMSO_200M_050219_1,19423, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19424 93.381 317.0 236500.0 25 0 32493.0 + 32048 RVLDLSENFL 10 106 603.3299268599987 1204.6453007867974 2 603.3295776247978 MULTI CID FTMS 0 0 0 19407 208981.984375 0.3419976542911621 2 -0.1951217651367187 17 Unmodified _RVLDLSENFL_ ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9 28.181266145913348 0.3355154477840527 3 D{I|L}SEN{M(Oxidation (M))|F}{I|L} 7 3 70.393 0.0 0.0 5.8435 0.0 0.0 368.25422866035314 0.0 368.25422866035314 0.0 59.68002299681771 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.7614393726401688 + D{I|L}SEN{M(Oxidation (M))|F}{I|L} 5.8435 + + 328 1 1.416 59558.2 1.0 13612 5810 19407 HBL1_DMSO_200M_050219_1,19424 HBL1_DMSO_200M_050219_1,19424,RVLDLSENFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19425 93.396 800.0 357600.0 25 0 18287.0 + 44579 YPFINSRIITV 11 178 661.8768240194503 1321.7390951057005 2 661.8778564333916 MULTI CID FTMS 0 0 0 19407 180656.640625 0.057096893445832 -7 0.7446975708007812 18 Unmodified _YPFINSRIITV_ ENSG00000037474|ENST00000264670|NSUN2;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 96.0343551737317 0.0004537960096947 3 YP{M(Oxidation (M))|F}{I|L}NSR{I|L}{I|L}TV 11 0 + 105.49 0.0 0.0 7.9809 7.9809 89.848 0.0 0.0 0.0 6.09710646674165 6.09710646674165 6.09710646674165 6.09710646674165 0 2.897940008672037 2.0 0.8283409326844268 0.3054621874040891 + + YP{M(Oxidation (M))|F}{I|L}NSR{I|L}{I|L}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}PP{I|L}Y{I|L}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}P{I|L}PY{I|L}TV;YP{M(Oxidation (M))|F}{I|L}NSR{I|L}{I|L}S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}PP{I|L}{I|L}YTV;YP{M(Oxidation (M))|F}{I|L}GGSR{I|L}{I|L}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}PPY{I|L}{I|L}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}P{I|L}P{I|L}YTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}PP{I|L}{I|L}TYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}P{I|L}{M(Oxidation (M))|F}{I|L}{I|L}TV 7.9809;7.5196;7.3864;7.3456;7.3121;7.2903;7.2051;7.1789;7.1553;7.0719 +;-;-;-;-;-;-;-;-;- + 6290 + 1 1.416 208679.4 1.0 13613 5810 19407 HBL1_DMSO_200M_050219_1,19425 HBL1_DMSO_200M_050219_1,19425,YPFINSRIITV True True YPFINSRIITV 93.396026 661.877856433392 236188960.0 19407.0 ENST00000513888.5_1_5:6600041-6604993:-|nuORF;;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;;ENSG00000037474|ENST00000264670|NSUN2;;nc|ENSG00000037474|Q08J23-3|NSUN2;;nc|ENSG00000037474|Q08J23-2|NSUN2 7.466140111287435 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19426 93.41 800.0 109990.0 25 0 7503.3 + 10809 FYVDSDMVNEF 11 146 683.2867548051889 1364.5589566771778 2 683.2857543826103 MULTI CID FTMS 0 0 0 19407 168270.6875 0.496699714414328 2 -0.1951217651367187 19 Unmodified _FYVDSDMVNEF_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 30.63653989081413 0.3728473165938781 3 {I|L} 1 11 12.474 0.0 0.0 0.91416 0.0 0.0 1233.463785634012 0.0 1233.463785634012 0.0 1.972353285392641 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.91416 - 532 + 1 1.416 68427.5 0.9800000190734864 13614 5810 19407 HBL1_DMSO_200M_050219_1,19426 HBL1_DMSO_200M_050219_1,19426,FYVDSDMVNEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19427 93.424 800.0 158020.0 25 0 15593.0 + 15314 IPLGGVYL 8 151 416.2511883373696 830.4878237415393 2 416.2511779665947 MULTI CID FTMS 0 0 0 19407 162693.84375 0.5712042647085123 10 -1.0134963989257812 20 Unmodified _IPLGGVYL_ REV__ENSG00000196569|ENST00000421865|LAMA2 24.20995872069341 0.5349487244130675 3 {I|L}P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L} 7 -1 + 51.451 0.0 0.0 6.1952 6.1952 90.286 0.0 0.0 0.0 36.84656467823528 1.0053458542731732 1.0053458542731732 13.5217280587553 0 0.4247425010840047 2.0 0.1861818737241735 0.0 {I|L}P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L};{I|L}P{I|L}[YK][TP] 6.1952;4.5671 -;- 72 + 1 1.416 100447.2 0.6800000071525574 13615 5810 19407 HBL1_DMSO_200M_050219_1,19427 HBL1_DMSO_200M_050219_1,19427,IPLGGVYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19429 93.428 10.0 5995300.0 25 0 605600.0 + 23261 LSVMNLLSF 9 87 512.2791580445313 1022.5437631558626 2 512.2795287966728 MULTI CID FTMS 0 0 0 19428 4848860.0 0.4966593089178988 -1 0.1072998046875 1 Unmodified _LSVMNLLSF_ ENSG00000165240|ENST00000341514|ATP7A;nc|ENSG00000165240|Q04656-2|ATP7A;nc|ENSG00000165240|Q04656-3|ATP7A;nc|ENSG00000165240|Q04656-5|ATP7A 32.30548876998284 0.1201446275138228 3 [VP]NA{I|L}Y 6 6 46.164 0.0 0.0 4.5146 0.0 0.0 0.0 362.1723091768 362.1723091768 20.938762185679813 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 1.1549471895720984 [VP]NA{I|L}Y 4.5146 - 142 1 1.416 50117.6 1.0 13616 5811 19428 HBL1_DMSO_200M_050219_1,19429 HBL1_DMSO_200M_050219_1,19429,LSVMNLLSF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19430 93.429 15.0 4143900.0 25 0 519420.0 + 17215 KLLEYIEEI 9 82 575.3233664411573 1148.6321799491143 2 575.3236572146416 MULTI CID FTMS 0 0 0 19428 2973908.25 0.731409041874398 1 -0.0878219604492187 2 Unmodified _KLLEYIEEI_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 32.89776655970281 0.1144444835665315 3 [Y{I|L}]E{I|L}K{I|L}EE{I|L} 9 4 + 74.919 0.0 0.0 6.5225 6.5225 79.847 0.0 0.0 0.0 1.4962335433677794 16.478174818886373 1.4962335433677794 1.4962335433677794 0 0.7302046884880937 1.3979400086720375 0.805462187404089 0.0 [Y{I|L}]E{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KY{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L};[Y{I|L}]E{I|L}KE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KYE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}KE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}YK{I|L}EE{I|L};[K{I|L}]{I|L}EY{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}YKE{I|L}E{I|L};[K{I|L}]{I|L}EYE{I|L}E{I|L} 6.5225;6.3922;6.2845;6.1071;5.9768;5.8691;5.7604;5.6996;5.345;5.2842 -;-;-;-;-;-;-;+;-;- + 428 1 1.416 54493.3 1.0 13617 5811 19428 HBL1_DMSO_200M_050219_1,19430 HBL1_DMSO_200M_050219_1,19430,KLLEYIEEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19431 93.43 23.0 3157400.0 25 0 660580.0 + 36309 SYLFSHVPL 9 78 531.7844631851925 1061.554373437185 2 531.7847778201103 MULTI CID FTMS 0 0 0 19428 1901403.625 0.6489594407095672 1 -0.0878219604492187 3 Unmodified _SYLFSHVPL_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 34.10243960390752 0.1078313939113124 3 [HS]{M(Oxidation (M))|F}V[YT]VP{I|L} 9 5 + 40.062 0.0 0.0 3.7739 3.7739 71.996 0.0 0.0 0.0 1.9812969097282007 8.969975784476159 1.9812969097282007 1.9812969097282007 0 0.868415180652539 0.9208187539523752 0.3807196863200844 0.0 [HS]{M(Oxidation (M))|F}V[YT]VP{I|L};[HV]S{M(Oxidation (M))|F}[YT]VP{I|L};[HS]{M(Oxidation (M))|F}{I|L}V{[{M(Oxidation (M))|F}C]|[YS]}P{I|L};[HS]{M(Oxidation (M))|F}V{I|L}{[{M(Oxidation (M))|F}C]|[YS]}P{I|L};[HS]V{M(Oxidation (M))|F}[YT]VP{I|L};[HV]S{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}P{I|L};[HS]V{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}P{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}V{[{M(Oxidation (M))|F}C]|[YS]}P{I|L};{[QN]|[E{I|L}]|[KN]}EV{I|L}{[{M(Oxidation (M))|F}C]|[YS]}P{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}[WY]P{I|L} 3.7739;3.5873;3.5612;3.4861;3.4381;3.2995;3.1503;2.4848;2.4097;1.8746 -;-;-;-;-;-;-;-;-;- 397 1 1.416 60561.6 1.0 13618 5811 19428 HBL1_DMSO_200M_050219_1,19431 HBL1_DMSO_200M_050219_1,19431,SYLFSHVPL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19432 93.432 34.0 2229500.0 25 0 243740.0 + 33213 SFLLVHLL 8 103 471.2962775002167 940.5780020672336 2 471.2965576052666 MULTI CID FTMS 0 0 0 19428 1088077.375 0.0235233748860343 8 -0.7180557250976562 4 Unmodified _SFLLVHLL_ REV__ENSG00000165899|ENST00000547103|OTOGL 24.20995872069341 0.5349487244130675 3 MP{I|L} 3 -1 32.14 0.0 0.0 3.417 0.0 0.0 0.0 596.3775728815061 596.3775728815061 -1.524494976091901 0.0 -1.524494976091901 0.0 0 0.0 1.2218487496163564 0.0 0.0 MP{I|L} 3.417 - 297 + 1 1.416 63793.3 1.0 13619 5811 19428 HBL1_DMSO_200M_050219_1,19432 HBL1_DMSO_200M_050219_1,19432,SFLLVHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19433 93.433 41.0 1435100.0 25 0 242180.0 + 4663 DAYVLPKLYV 10 79 590.8342767634228 1179.6540005936456 2 590.8345214724541 MULTI CID FTMS 0 0 0 19428 1023023.1875 0.0178336772296123 -3 0.3026275634765625 5 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 38.17557092003332 0.1768326257063233 3 P{I|L}{I|L}VYWYV 8 7 34.15 0.0 0.0 2.8949 0.0 0.0 128.09544570136876 0.0 128.09544570136876 0.0 -3.0174778224377974 -3.0174778224377974 0.0 0 0.5044321917401079 0.0 0.0 0.0 P{I|L}{I|L}VYWYV 2.8949 - 208 1 1.416 47375.4 1.0 13620 5811 19428 HBL1_DMSO_200M_050219_1,19433 HBL1_DMSO_200M_050219_1,19433,DAYVLPKLYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19434 93.434 65.0 1234400.0 25 0 243810.0 -1 SLGFLMPWL 9 83 540.2847020083665 1078.5548510835329 2 540.2848998904228 MULTI CID FTMS 0 0 0 19428 796780.5 0.2702915271302262 1 -0.0878219604492187 6 Oxidation (M) _SLGFLM(Oxidation (M))PWL_ ENST00000256689.9_1_12:46761121-46764364:-|nuORF 23.1484247019978 0.2366544122328345 3 {[TV]|[{I|L}S]}VDE{M(Oxidation (M))|F} 6 -1 56.956 0.0 0.0 5.2807 0.0 0.0 0.0 385.2099984042646 385.2099984042646 17.059771852360797 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3494850021680094 0.0 {[TV]|[{I|L}S]}VDE{M(Oxidation (M))|F} 5.2807 - 602 + 1 1.416 69635.2 1.0 13621 5811 19428 HBL1_DMSO_200M_050219_1,19434 HBL1_DMSO_200M_050219_1,19434,SLGFLMPWL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19435 93.436 97.0 1337300.0 25 0 202620.0 + 4515 DAYLPLRL 8 103 480.7794978968272 959.5444428604544 2 480.7787048220634 MULTI CID FTMS 0 0 0 19428 569961.3125 0.0137032699399477 10 -1.0074462890625 7 Unmodified _DAYLPLRL_ ENSG00000062822|ENST00000440232|POLD1 34.10243960390752 0.3329570729325616 3 {[DA]|[EG]}Y{I|L}{I|L}PR{I|L} 8 2 + 57.465 0.0 0.0 5.9887 5.9887 80.702 0.0 0.0 0.0 38.29609801264181 10.487113956088272 10.487113956088272 3.0102999566398125 0 0.8807196863200843 1.6989700043360187 0.0 0.2396518287104437 {[DA]|[EG]}Y{I|L}{I|L}PR{I|L};{[DA]|[EG]}Y{I|L}P{I|L}R{I|L};{[DA]|[EG]}{I|L}Y{I|L}PR{I|L};{[DA]|[EG]}{I|L}YP{I|L}R{I|L} 5.9887;5.675;4.9704;4.6567 -;+;-;- + 162 + 1 1.416 103154.2 1.0 13622 5811 19428 HBL1_DMSO_200M_050219_1,19435 HBL1_DMSO_200M_050219_1,19435,DAYLPLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19436 93.44 158.0 731630.0 25 0 152800.0 + 11733 GLIEILKKV 9 91 338.2303843860517 1011.6693237583552 3 338.2301513552666 MULTI CID FTMS 0 0 0 19428 481290.90625 0.0762395688383209 4 -0.3824310302734375 8 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 36.12702656103203 0.0967173616627612 3 {[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KKV 9 0 + 68.335 0.0 0.0 6.7547 6.7547 94.63 0.0 0.0 0.0 40.77378913214447 10.499906789969572 10.499906789969572 68.3354578075131 0 0.3494850021680094 2.0 0.5 0.2302046884880938 + + {[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KKV 6.7547 + + 203 + 1 1.416 98098.7 1.0 13623 5811 19428 HBL1_DMSO_200M_050219_1,19436 HBL1_DMSO_200M_050219_1,19436,GLIEILKKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19437 93.443 147.0 984850.0 25 0 136390.0 + 11736 GLIEILKKV 9 125 506.8419687512129 1011.6693845692256 2 506.8423034548759 MULTI CID FTMS 0 0 0 19428 361304.9375 0.0501971580016274 4 -0.3824310302734375 9 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 65.23502041540118 0.0231836506122253 3 VA{I|L}E{I|L}{I|L}KKV 9 2 + 102.28 0.0 0.0 10.11 10.11 99.714 0.0 0.0 0.0 68.6329002199681 11.706962271689749 11.706962271689749 102.27806275181898 0 1.5356668758921828 2.0 0.4247425010840047 0.1861818737241735 VA{I|L}E{I|L}{I|L}KKV 10.11 - 970 + 1 1.416 110080.4 1.0 13624 5811 19428 HBL1_DMSO_200M_050219_1,19437 HBL1_DMSO_200M_050219_1,19437,GLIEILKKV True True GLIEILKKV 93.442519 506.8445 373703848.0 19428.0 ENSG00000105185|ENST00000590247|PDCD5 5.714480876922607 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19438 93.446 167.0 742420.0 25 0 131190.0 + 26200 NQHRKVYL 8 137 529.3002944283521 1056.586035923504 2 529.2966186404228 MULTI CID FTMS 0 0 0 19428 302881.09375 0.1335716930949179 12 -1.2348556518554688 10 Unmodified _NQHRKVYL_ REV__ENSG00000121281|ENST00000673801|ADCY7 26.34127834903884 0.4900704351052977 3 YGY{I|L}{[DS]|[MA]|[CV]|TT}{I|L}KV 9 -1 + 44.88 0.0 0.0 4.2476 4.2476 73.949 0.0 0.0 0.0 14.645869971586194 2.4683448449142986 2.4683448449142986 2.4683448449142986 0 0.0 1.3979400086720375 0.0 0.1549471895720985 YGY{I|L}{[DS]|[MA]|[CV]|TT}{I|L}KV;YGY{I|L}{[DS]|[MA]|[CV]|TT}KV{I|L};YGY{I|L}{[DS]|[MA]|[CV]|TT}K{I|L}V;[Y{I|L}]CKRYV{I|L};[VP]AADP{I|L}YV{I|L};[Y{I|L}][RK]CYV{I|L};[Y{I|L}][RK]{I|L}Y{[DS]|[MA]|[CV]|TT};{NN|[MP]|[D{I|L}]|[EV]}[QP]P{I|L}YV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[EP]P{I|L}YV{I|L};[VP][QP]E{I|L}YV{I|L} 4.2476;4.014;3.4991;2.492;2.0497;2.0237;1.5014;1.4663;1.4592;1.3958 -;-;-;-;-;-;-;-;-;- 1094 + 1 1.416 96248.0 1.0 13625 5811 19428 HBL1_DMSO_200M_050219_1,19438 HBL1_DMSO_200M_050219_1,19438,NQHRKVYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19439 93.46 800.0 378180.0 25 0 38052.0 + 5648 DPFAFIHKI 9 189 363.2027334629652 1086.5863709890957 3 363.5367309451103 MULTI CID FTMS 0 0 0 19428 199137.9375 0.3186569950317341 -3 0.3026275634765625 11 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 27.628801355627647 0.1796483985696185 3 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L} 9 0 + 82.934 0.0 0.0 7.6325 7.6325 81.4 0.0 0.0 0.0 33.46787486224656 0.5799194697768684 0.5799194697768684 0.5799194697768684 0 0.5189301784845296 1.6989700043360187 0.0 0.1861818737241735 + + DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L};DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H{I|L}K;DP{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}HK{I|L};DP{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}H{I|L}K;DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}{I|L}HK;DP{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}HK{I|L};DP{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}H{I|L}K;DP{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}{I|L}HK;DP{I|L}HD{I|L}HK{I|L};DP{I|L}HD{I|L}H{I|L}K 7.6325;7.5792;6.9893;6.9359;6.8067;6.2844;6.2311;6.1634;6.0244;5.971 +;-;-;-;-;-;-;-;-;- + 1206 + 1 1.416 249424.2 0.7200000286102295 13626 5811 19428 HBL1_DMSO_200M_050219_1,19439 HBL1_DMSO_200M_050219_1,19439,DPFAFIHKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19440 93.473 800.0 96227.0 25 0 24343.0 -1 0 110 839.5029795822544 1676.9914062313087 2 840.0047485232353 MULTI CID FTMS 0 0 0 19428 140489.34375 0.963295878865783 1 -0.0878219604492187 12 3 [VP]NA 4 -1 12.676 0.0 0.0 0.75588 0.0 0.0 0.0 1292.765856264765 1292.765856264765 7.191512336730028 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 [VP]NA 0.75588 - 211 1 1.416 57588.2 0.8899999856948853 13627 5811 19428 HBL1_DMSO_200M_050219_1,19440 HBL1_DMSO_200M_050219_1,19440, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19441 93.477 182.0 468120.0 25 0 51623.0 + -1 LYYLDTMI 8 130 524.2574681345093 1046.5003833358185 2 524.2586547732353 MULTI CID FTMS 0 0 0 19428 144767.296875 0.7722477935764228 -1 0.1072998046875 13 Oxidation (M) _LYYLDTM(Oxidation (M))I_ REV__ENSG00000033170|ENST00000673929|FUT8;REV__nc|ENSG00000033170|Q9BYC5-2|FUT8 10.183394434864962 0.7604730176254005 3 [EP]N[WK]N{M(Oxidation (M))|F}{I|L} 8 -1 [EP]N[WK]N{M(Oxidation (M))|F} + + 13.495 -6.7338 -0.73561 1.2895 1.2895 48.455 0.0 0.0 0.0 0.0 -0.3174312876055314 -0.3174312876055314 0.0 0 0.0 0.0 0.0 0.0 [EP]N[WK]N{M(Oxidation (M))|F}{I|L} 1.2895 - 202 + 1 1.416 73485.1 1.0 13628 5811 19428 HBL1_DMSO_200M_050219_1,19441 HBL1_DMSO_200M_050219_1,19441,LYYLDTMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19442 93.491 800.0 279290.0 25 0 21353.0 + 997 AFYDWDNTEL 10 187 637.272379446708 1272.530205960216 2 637.2731811404228 MULTI CID FTMS 0 0 0 19428 117783.1484375 0.3399064122595205 -1 0.1072998046875 14 Unmodified _AFYDWDNTEL_ ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2 65.23502041540118 0.0228537820337083 3 {[MS]|[{M(Oxidation (M))|F}A]}YDWDNTE{I|L} 10 0 + 44.106 0.0 0.0 3.466 3.466 73.785 0.0 0.0 0.0 3.521825181113627 8.066884185923655 3.521825181113627 3.521825181113627 0 0.5579021467263782 0.0 0.3807196863200844 0.7887254899964358 + + {[MS]|[{M(Oxidation (M))|F}A]}YDWDNTE{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}AWDNTE{I|L};[WD]YD{M(Oxidation (M))|F}ANTE{I|L};{[MS]|[{M(Oxidation (M))|F}A]}YD{[DA]|[EG]}DNTE{I|L};[WD]DY{M(Oxidation (M))|F}ANTE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TNDW{[{M(Oxidation (M))|F}C]|[YS]}D{I|L};[WD]YA{M(Oxidation (M))|F}DNTE{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}A{[DA]|[EG]}DNTE{I|L};[DP]{[{M(Oxidation (M))|F}H]|[RQ]}WDNTE{I|L};{[QS]|[NT]}DWDY{[MS]|[{M(Oxidation (M))|F}A]}E{I|L} 3.466;3.1893;2.7687;2.7458;2.7065;2.6816;2.5418;2.4691;2.4213;2.4009 +;-;-;-;-;-;-;-;-;- + 4447 1 1.416 177039.8 0.7699999809265137 13629 5811 19428 HBL1_DMSO_200M_050219_1,19442 HBL1_DMSO_200M_050219_1,19442,AFYDWDNTEL True True AFYDWDNTEL 93.490827 637.273181140423 2862588.0 19428.0 ENSG00000184432|ENST00000333188|COPB2;;nc|ENSG00000184432|P35606-2|COPB2 6.529982407887776 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19443 93.504 788.0 233360.0 25 0 41655.0 -1 0 121 1086.860761466092 3257.5604549984764 3 1087.535327136517 MULTI CID FTMS 0 0 0 19428 116698.5 0.2260752013614086 -2 0.2249832153320312 15 3 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H[K{I|L}] 9 -1 24.39 0.0 0.0 0.74872 0.0 0.0 2170.97118132624 0.0 2170.97118132624 0.0 -5.316117824931506 -5.316117824931506 0.0 0 0.0 0.0 0.4247425010840047 0.0 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H[K{I|L}] 0.74872 - 1716 + 1 1.416 118918.3 1.0 13630 5811 19428 HBL1_DMSO_200M_050219_1,19443 HBL1_DMSO_200M_050219_1,19443, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19444 93.512 316.0 170100.0 25 0 30122.0 -1 0 74 733.3766281545056 2197.1080550637166 3 733.3777953982353 MULTI CID FTMS 0 0 0 19428 96611.7265625 1.0 0 0.0 16 3 D{I|L}{I|L}{I|L} 4 -1 24.68 0.0 0.0 1.1233 0.0 0.0 1001.4686030146916 738.3248524647227 1739.7934554794142 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 D{I|L}{I|L}{I|L} 1.1233 - 132 + 1 1.416 49093.2 1.0 13631 5811 19428 HBL1_DMSO_200M_050219_1,19444 HBL1_DMSO_200M_050219_1,19444, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19446 93.516 15.0 3931400.0 25 0 538910.0 + 19495 LFLEKAMQL 9 69 546.8093527531676 1091.604152573135 2 546.8101074099541 MULTI CID FTMS 0 0 0 19445 3574011.25 0.9441261484872764 2 -0.22589111328125 1 Unmodified _LFLEKAMQL_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 74.92900055777586 0.0191935851694334 3 {I|L}{M(Oxidation (M))|F}{I|L}[YN]AH 7 5 44.341 0.0 0.0 4.062 0.0 0.0 0.0 230.1382998102172 230.1382998102172 30.84585097418333 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.7742275032520141 {I|L}{M(Oxidation (M))|F}{I|L}[YN]AH 4.062 - 206 + 1 1.411 48507.5 1.0 13632 5812 19445 HBL1_DMSO_200M_050219_1,19446 HBL1_DMSO_200M_050219_1,19446,LFLEKAMQL True True LFLEKAMQL 93.515931 546.810107409954 71469232.0 19445.0 ENSG00000109320|ENST00000226574|NFKB1;;nc|ENSG00000109320|P19838|NFKB1;;nc|ENSG00000109320|P19838-3|NFKB1 4.130755027135213 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19447 93.517 31.0 1449500.0 25 0 191470.0 + 10566 FVIDLQTRL 9 53 552.8240295520234 1103.6335061708469 2 552.8245117068291 MULTI CID FTMS 0 0 0 19445 1887641.5 1.0 0 0.0 2 Unmodified _FVIDLQTRL_ ENSG00000131051|ENST00000253363|RBM39;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;nc|ENSG00000131051|Q14498-3|RBM39 15.248480904072842 0.4239247793462406 3 V{[VA]|[{I|L}G]}Q{I|L}D{I|L}{NN|[MP]|[D{I|L}]|[EV]} 9 6 36.132 0.0 0.0 3.2739 0.0 0.0 119.07409865547032 0.0 119.07409865547032 0.0 33.032731160692144 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{[VA]|[{I|L}G]}Q{I|L}D{I|L}{NN|[MP]|[D{I|L}]|[EV]} 3.2739 - 38 1 1.411 39673.0 1.0 13633 5812 19445 HBL1_DMSO_200M_050219_1,19447 HBL1_DMSO_200M_050219_1,19447,FVIDLQTRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19448 93.518 13.0 4887100.0 25 0 758190.0 + 4524 DAYLVHLI 8 72 472.2659550372491 942.5173571412982 2 472.2661620974541 MULTI CID FTMS 0 0 0 19445 3808787.5 0.7822946913856005 -1 0.0878219604492187 3 Unmodified _DAYLVHLI_ ENSG00000105671|ENST00000247003|DDX49;ENST00000595858.5_1_19:19032475-19037138:+|nuORF;ENST00000601803.5_1_19:19032987-19035509:+|nuORF;nc|ENSG00000105671|Q9Y6V7-2|DDX49 36.46614268402704 0.2934124525509074 3 {[DA]|[EG]}Y{I|L}VH{I|L}{I|L} 8 0 + 55.699 0.0 0.0 5.9095 5.9095 91.785 0.0 0.0 0.0 22.51094186414001 6.463322694006841 6.463322694006841 55.69852949038413 0 0.805462187404089 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}Y{I|L}VH{I|L}{I|L} 5.9095 + + 78 + 1 1.411 54512.0 1.0 13634 5812 19445 HBL1_DMSO_200M_050219_1,19448 HBL1_DMSO_200M_050219_1,19448,DAYLVHLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19449 93.519 38.0 1387200.0 25 0 156190.0 + 1934 AMIRLLSI 8 67 458.7859699083643 915.5573868835286 2 458.7861816287041 MULTI CID FTMS 0 0 0 19445 1621916.625 1.0 0 0.0 4 Unmodified _AMIRLLSI_ REV__L1PA10_dup4980|chr11:35097301-35097836:+|1.220344252307297|0.0480148522199164|4.67|48.0|18|1|anti-sense 57.47134341890925 0.1146309765603773 3 MA{I|L} 3 -1 45.177 0.0 0.0 4.9344 0.0 0.0 0.0 597.3734835260374 597.3734835260374 19.23516269895728 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 MA{I|L} 4.9344 - 24 + 1 1.411 47065.6 1.0 13635 5812 19445 HBL1_DMSO_200M_050219_1,19449 HBL1_DMSO_200M_050219_1,19449,AMIRLLSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19450 93.521 24.0 2350900.0 25 0 324940.0 + 13273 HIPDVITYL 9 73 535.7982164087542 1069.5818798843084 2 535.7979614138603 MULTI CID FTMS 0 0 0 19445 1615013.0 0.3879988244811353 -6 0.6211318969726562 5 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 36.04419817259434 0.0971720506436186 3 [H{I|L}][DP]V{I|L}TY{I|L} 9 0 + 42.571 0.0 0.0 3.9801 3.9801 77.363 0.0 0.0 0.0 5.509074688805804 8.384767769392738 5.509074688805804 5.509074688805804 0 0.6989700043360187 1.5228787452803376 0.5 0.0 + + [H{I|L}][DP]V{I|L}TY{I|L};[VP]D{I|L}H{I|L}TY{I|L};[DP]V{I|L}H{I|L}TY{I|L};[VP]D{I|L}T[H{I|L}]Y{I|L};[EP]VVH{I|L}TY{I|L};[DP]V{I|L}T[H{I|L}]Y{I|L};[H{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[H{I|L}]Y{I|L};[EP][HV]V{I|L}TY{I|L};[DP][H{I|L}]V{I|L}TY{I|L};[EP]VVT[H{I|L}]Y{I|L} 3.9801;3.465;3.121;2.1091;1.9609;1.765;1.6;1.5148;1.4847;0.60495 +;-;-;-;-;-;-;-;-;- + 173 1 1.411 50613.5 1.0 13636 5812 19445 HBL1_DMSO_200M_050219_1,19450 HBL1_DMSO_200M_050219_1,19450,HIPDVITYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19451 93.522 29.0 1875600.0 25 0 422210.0 + 20102 LKEKLEVI 8 77 486.3105355253538 970.6065181175076 2 486.3105651736259 MULTI CID FTMS 0 0 0 19445 1551452.75 1.0 0 0.0 6 Unmodified _LKEKLEVI_ ENSG00000132321|ENST00000409907|IQCA1;nc|ENSG00000132321|Q86XH1-2|IQCA1;nc|ENSG00000132321|Q86XH1-5|IQCA1 37.97399986684836 0.2681860861828418 3 [K{I|L}]EK{I|L}E{I|L}V 8 2 + 36.124 0.0 0.0 3.7218 3.7218 73.439 0.0 0.0 0.0 0.5360498482393439 19.67084689121528 0.5360498482393439 3.0102999566398125 0 0.7742275032520141 0.0 1.1549471895720984 0.0 [K{I|L}]EK{I|L}E{I|L}V;{[QN]|[E{I|L}]|[KN]}KK{I|L}E{I|L}V;{[SA]|[TG]}[{I|L}V]K{I|L}E{I|L}V;[{I|L}V]{[SA]|[TG]}K{I|L}E{I|L}V;[K{I|L}]EV{I|L}{[SA]|[TG]}{I|L}V;{[QN]|[E{I|L}]|[KN]}VK{I|L}{[SA]|[TG]}{I|L}V;[{I|L}V]EK{I|L}{[SA]|[TG]}{I|L}V;{[QN]|[E{I|L}]|[KN]}KV{I|L}{[SA]|[TG]}{I|L}V;{[SA]|[TG]}[{I|L}V]V{I|L}{[SA]|[TG]}{I|L}V;[PA]{I|L}RR{M(Oxidation (M))|F}{I|L}V 3.7218;3.4117;3.2065;2.4574;2.1967;2.0153;2.0153;1.8865;1.6869;1.0558 -;-;-;-;-;-;-;-;-;- 228 1 1.411 47758.8 1.0 13637 5812 19445 HBL1_DMSO_200M_050219_1,19451 HBL1_DMSO_200M_050219_1,19451,LKEKLEVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19452 93.523 43.0 1597000.0 25 0 173080.0 + 3117 AVPEIMPEL 9 80 499.7651658010952 997.5157786689904 2 499.7654907107353 MULTI CID FTMS 0 0 0 19445 1235143.5 1.0 0 0.0 7 Unmodified _AVPEIMPEL_ ENSG00000169288|ENST00000315567|MRPL1;ENST00000506674.1_1_4:78804483-78828134:+|nuORF 30.22481116460888 0.1466181017706357 3 [EP]{I|L}MPE 6 3 39.13 0.0 0.0 3.9227 0.0 0.0 0.0 298.1790585424285 298.1790585424285 18.670912423450403 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 + [EP]{I|L}MPE 3.9227 + + 379 1 1.411 61768.2 1.0 13638 5812 19445 HBL1_DMSO_200M_050219_1,19452 HBL1_DMSO_200M_050219_1,19452,AVPEIMPEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19453 93.524 40.0 706470.0 25 0 221580.0 -1 0 45 560.0044070397718 1676.9913917195151 3 560.0045043826103 MULTI CID FTMS 0 0 0 19445 1208590.5 0.6573019259720532 2 -0.22589111328125 8 3 {I|L} 1 -1 10.713 0.0 0.0 0.63884 0.0 0.0 1545.89637326424 0.0 1545.89637326424 0.0 8.239087409443187 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.63884 - 3 + 1 1.411 30234.6 1.0 13639 5812 19445 HBL1_DMSO_200M_050219_1,19453 HBL1_DMSO_200M_050219_1,19453, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19454 93.526 90.0 840070.0 25 0 113820.0 + 862 AEVDVNQKLLL 11 101 621.3578322744459 1240.7011116156916 2 621.3596679568291 MULTI CID FTMS 0 0 0 19445 767472.875 0.0067659992931022 14 -1.5692901611328125 9 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 34.93206674587334 0.2904649469012649 3 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L} 12 -1 + 90.276 0.0 0.0 7.2762 7.2762 86.97 0.0 0.0 0.0 12.430380486862944 7.447274948966935 7.447274948966935 4.771212547196626 0 1.924742501084005 1.6989700043360187 0.9247425010840048 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}E{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}EG{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}DVAW{I|L}{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}W{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}EDVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}VEVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}VDA{I|L}{I|L}EG{I|L}{I|L} 7.2762;6.8917;6.8526;6.805;6.7043;6.7043;6.2743;6.246;6.2332;6.1865 -;-;-;-;-;-;-;-;-;- 11988 1 1.411 60572.7 1.0 13640 5812 19445 HBL1_DMSO_200M_050219_1,19454 HBL1_DMSO_200M_050219_1,19454,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19455 93.527 20.0 1096800.0 25 0 89196.0 + 4496 DAYIPLQI 8 50 466.7577743737767 931.5009958143536 2 466.7572509646416 MULTI CID FTMS 0 0 0 19445 653759.375 0.843237197609884 2 -0.22589111328125 10 Unmodified _DAYIPLQI_ ENSG00000104872|ENST00000262265|PIH1D1;ENST00000595633.5_1_19:49949641-49950433:-|nuORF;ENST00000602076.5_1_19:49949641-49950083:-|nuORF 30.22481116460888 0.4082965392918993 3 {[DA]|[EG]}Y{I|L} 4 4 31.911 0.0 0.0 3.4258 0.0 0.0 0.0 466.2648257306223 466.2648257306223 13.214562785677654 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}Y{I|L} 3.4258 + + 37 1 1.411 26187.6 1.0 13641 5812 19445 HBL1_DMSO_200M_050219_1,19455 HBL1_DMSO_200M_050219_1,19455,DAYIPLQI False True DAYIPLQI 93.527381 466.757250964642 15402310.0 19445.0 ENSG00000104872|ENST00000262265|PIH1D1;;ENST00000602076.5_1_19:49949641-49950083:-|nuORF;;ENST00000595633.5_1_19:49949641-49950433:-|nuORF 5.710836092631022 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19456 93.53 102.0 611320.0 25 0 35044.0 -1 0 80 926.9344493233524 1851.8543457135047 2 927.4365112185478 MULTI CID FTMS 0 0 0 19445 597001.5 0.8396325245678918 2 -0.22589111328125 11 3 [YQ][HS]E[QA]QNA{M(Oxidation (M))|F}YE 13 -1 38.492 0.0 0.0 2.0786 0.0 0.0 0.0 253.1364251414922 253.1364251414922 20.075348521919555 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YQ][HS]E[QA]QNA{M(Oxidation (M))|F}YE 2.0786 - 689 1 1.411 46431.7 1.0 13642 5812 19445 HBL1_DMSO_200M_050219_1,19456 HBL1_DMSO_200M_050219_1,19456, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19457 93.531 83.0 640520.0 25 0 63781.0 + 19534 LFPMPRVIY 9 66 568.3206792616899 1134.6268055901796 2 568.3206664919853 MULTI CID FTMS 0 0 0 19445 527114.3125 1.0 0 0.0 12 Unmodified _LFPMPRVIY_ ENSG00000013293|ENST00000231706|SLC7A14 11.640296217721598 0.521594087909532 3 MP{[QN]|[E{I|L}]|[KN]} 4 6 20.005 0.0 0.0 1.7631 0.0 0.0 646.3814000272847 0.0 646.3814000272847 0.0 7.530834337684311 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 MP{[QN]|[E{I|L}]|[KN]} 1.7631 - 20 1 1.411 45391.7 1.0 13643 5812 19445 HBL1_DMSO_200M_050219_1,19457 HBL1_DMSO_200M_050219_1,19457,LFPMPRVIY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19458 93.535 194.0 560170.0 25 0 113040.0 + 29288 QIFNGTFVKL 10 111 583.8322092769051 1165.6498656206102 2 583.8331176638603 MULTI CID FTMS 0 0 0 19445 392652.875 0.0222504239251307 10 -1.02581787109375 13 Unmodified _QIFNGTFVKL_ ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF 49.55428908609986 0.0827668555218455 3 [Q{I|L}]{M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L} 10 0 + 60.823 0.0 0.0 5.2179 5.2179 76.541 0.0 0.0 0.0 17.78151250383644 2.04119982655925 2.04119982655925 2.04119982655925 0 0.5629529932484498 1.6989700043360187 0.2614393726401688 0.6203715150305281 + + [Q{I|L}]{M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L};[Q{I|L}]{M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}V{I|L}K;[Q{I|L}]{M(Oxidation (M))|F}GG{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L};[Q{I|L}]{M(Oxidation (M))|F}GG{[SA]|[TG]}{M(Oxidation (M))|F}V{I|L}K;[Q{I|L}]{M(Oxidation (M))|F}N{I|L}{I|L}[YQ]K 5.2179;5.0428;4.4317;4.2566;2.7022 +;-;-;-;- + 554 + 1 1.411 86701.7 1.0 13644 5812 19445 HBL1_DMSO_200M_050219_1,19458 HBL1_DMSO_200M_050219_1,19458,QIFNGTFVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19459 93.539 200.0 652030.0 25 0 89488.0 + 28271 PRHGGCMT 8 115 429.6902145286497 857.3658761240995 2 429.6904785037041 MULTI CID FTMS 0 0 0 19445 351607.96875 1.0 0 0.0 14 Unmodified _PRHGGCMT_ REV__nc|ENSG00000078319|A4D2B8-2|PMS2P1;REV__nc|ENSG00000078319|A4D2B8-3|PMS2P1;REV__nc|ENSG00000078319|A4D2B8|PMS2P1 9.347437153973935 0.7675937258251505 3 {[YD]|[{M(Oxidation (M))|F}M]}{I|L} 3 -1 31.695 0.0 0.0 3.6968 0.0 0.0 0.0 463.16754783724326 463.16754783724326 3.947340481202062 0.0 0.0 0.0 0 0.5 2.0 0.2742275032520141 0.0 {[YD]|[{M(Oxidation (M))|F}M]}{I|L} 3.6968 - 63 1 1.411 104099.5 1.0 13645 5812 19445 HBL1_DMSO_200M_050219_1,19459 HBL1_DMSO_200M_050219_1,19459,PRHGGCMT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19460 93.547 442.0 432410.0 25 0 39465.0 -1 0 128 1029.9765094087563 2057.938465884313 2 1030.478442370892 MULTI CID FTMS 0 0 0 19445 274545.625 0.1439854407447923 -5 0.5373001098632812 15 3 {[QN]|[E{I|L}]|[KN]}DAV{I|L}GAMES{I|L}DG 14 -1 62.275 0.0 0.0 3.0261 0.0 0.0 0.0 654.2523458207826 654.2523458207826 36.25193792897863 0.0 0.0 0.0 0 0.2302046884880938 1.0 0.7134679910804405 0.0 {[QN]|[E{I|L}]|[KN]}DAV{I|L}GAMES{I|L}DG 3.0261 - 74512 1 1.411 128021.4 1.0 13646 5812 19445 HBL1_DMSO_200M_050219_1,19460 HBL1_DMSO_200M_050219_1,19460, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19461 93.548 51.0 468220.0 25 0 71191.0 32896 SEILTDILL 9 60 508.7990428052187 1015.5835326772374 2 508.7988159060478 MULTI CID FTMS 0 0 0 19445 278132.28125 1.0 0 0.0 16 Unmodified _SEILTDILL_ ENSG00000155754|ENST00000439140|C2CD6 12.531546534597751 0.4974689918368763 3 {I|L} 1 8 14.604 0.0 0.0 1.438 0.0 0.0 884.4883921516499 0.0 884.4883921516499 0.0 4.6040937697618745 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.438 + + 15 + 1 1.411 25872.7 1.0 13647 5812 19445 HBL1_DMSO_200M_050219_1,19461 HBL1_DMSO_200M_050219_1,19461,SEILTDILL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19462 93.562 800.0 263960.0 25 0 85081.0 + 12490 GVAVRGHV 8 141 397.736306991466 793.458061049732 2 397.7362548708916 MULTI CID FTMS 0 0 0 19445 219821.703125 1.0 0 0.0 17 Unmodified _GVAVRGHV_ REV__ENSG00000204131|ENST00000633930|NHSL2 6.354104778181461 0.7857632046190106 3 [MT]{M(Oxidation (M))|F} 3 -1 19.666 0.0 0.0 2.4785 0.0 0.0 0.0 411.31326059490704 411.31326059490704 4.181212380090219 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [MT]{M(Oxidation (M))|F} 2.4785 - 50 1 1.411 167583.0 0.8999999761581421 13648 5812 19445 HBL1_DMSO_200M_050219_1,19462 HBL1_DMSO_200M_050219_1,19462,GVAVRGHV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19463 93.572 573.0 160090.0 25 0 34930.0 25569 NEWYDFYLISQ 11 122 739.338369110038 1476.662185286876 2 739.3399536013603 MULTI CID FTMS 0 0 0 19445 202356.078125 0.6991232826367575 5 -0.4082260131835937 18 Unmodified _NEWYDFYLISQ_ ENSG00000134627|ENST00000299001|PIWIL4 7.608950283845883 0.8392484121837455 3 [DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]W{M(Oxidation (M))|F}{I|L}{I|L}SYQ 11 7 + 66.221 0.0 0.0 4.4845 4.4845 74.418 0.0 0.0 0.0 29.217159077201863 4.4279089090724 4.4279089090724 2.257631809239556 0 0.0 2.0 1.3684151806525389 0.0 [DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]W{M(Oxidation (M))|F}{I|L}{I|L}SYQ;[DV]TCC[VS]{M(Oxidation (M))|F}{I|L}{I|L}SYQ;[DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]W{M(Oxidation (M))|F}{I|L}{I|L}S[SG]{M(Oxidation (M))|F};[VS]ECC[VS]{M(Oxidation (M))|F}{I|L}{I|L}SYQ;W{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))M]{[ET]|[MV]}{I|L}SYQ;[DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]W{M(Oxidation (M))|F}{I|L}[YQ]S{I|L};[DV]T[YC(Carbamidomethyl (C))]V{[ET]|[MV]}{I|L}SYQ;[VS]{I|L}Y[C(Carbamidomethyl (C))C]E{I|L}{I|L}SYQ;[VS][WH]{I|L}{M(Oxidation (M))|F}WCCT[VP];W{M(Oxidation (M))|F}E[{M(Oxidation (M))|F}E][QT]{I|L}SYQ 4.4845;4.3316;3.6905;3.5197;3.1713;3.1628;3.0419;2.9448;2.91;2.8028 -;-;-;-;-;-;-;-;-;- 1634 + 1 1.411 67100.3 1.0 13649 5812 19445 HBL1_DMSO_200M_050219_1,19463 HBL1_DMSO_200M_050219_1,19463,NEWYDFYLISQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19464 93.579 361.0 213930.0 25 0 72440.0 + 40347 VHNITETSF 9 89 349.8412757389952 1046.5019978171856 3 349.8409301638603 MULTI CID FTMS 0 0 0 19445 148820.15625 1.0 0 0.0 19 Unmodified _VHNITETSF_ ENSG00000145087|ENST00000471454|STXBP5L;nc|ENSG00000145087|Q9Y2K9|STXBP5L 7.910154910731844 0.6385446671287552 3 {[DA]|[EG]}Y 3 8 17.28 0.0 0.0 1.6512 0.0 0.0 0.0 694.349964696345 694.349964696345 3.300756084811816 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[DA]|[EG]}Y 1.6512 - 36 1 1.411 67100.4 1.0 13650 5812 19445 HBL1_DMSO_200M_050219_1,19464 HBL1_DMSO_200M_050219_1,19464,VHNITETSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19465 93.592 800.0 387450.0 25 0 56403.0 + 25718 NIIKLIDTV 9 211 514.821461820631 1027.628370708062 2 514.8219482302666 MULTI CID FTMS 0 0 0 19445 130637.171875 1.0 0 0.0 20 Unmodified _NIIKLIDTV_ ENSG00000070770|ENST00000262506|CSNK2A2;ENST00000562367.1_1_16:58208309-58230657:-|nuORF 71.92227651296345 0.0203558744033348 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[CA]|SS}{I|L}[R{I|L}]{I|L} 9 5 + 64.437 0.0 0.0 6.2705 6.2705 89.33 0.0 0.0 0.0 27.14764271519251 12.491983573911137 12.491983573911137 9.365429718850734 0 0.7134679910804405 2.0 0.7302046884880937 0.9876954943324544 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[CA]|SS}{I|L}[R{I|L}]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[WT]|[RM]}[R{I|L}]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[CA]|SS}{I|L}{I|L}{I|L}R;{[QV]|[N{I|L}]|[RA]|[KV]}{[WT]|[RM]}{I|L}[R{I|L}]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[TA]D{I|L}[R{I|L}]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[WT]|[RM]}{I|L}{I|L}R;{I|L}{I|L}RS{I|L}TVN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}SKK{I|L}VN{I|L};{I|L}{I|L}RST{I|L}VN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RP][R{M(Oxidation (M))|F}]{I|L} 6.2705;5.3591;5.0548;4.6485;4.3503;4.1435;3.9367;3.8274;3.6866;3.4531 -;-;-;-;-;-;-;-;-;- 4184 + 1 1.411 236368.6 0.9300000071525574 13651 5812 19445 HBL1_DMSO_200M_050219_1,19465 HBL1_DMSO_200M_050219_1,19465,NIIKLIDTV True True NIIKLIDTV 93.592477 514.821948230267 1379917.75 19445.0 ENSG00000070770|ENST00000262506|CSNK2A2;;ENST00000562367.1_1_16:58208309-58230657:-|nuORF 4.984111785888672 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19467 93.597 25.0 1950500.0 25 0 146320.0 + 4553 DAYQVLSTL 9 80 505.2638250157652 1008.5130970983304 2 505.2639343142509 MULTI CID FTMS 0 0 0 19466 2004922.125 0.5435116990693322 3 -0.3055191040039062 1 Unmodified _DAYQVLSTL_ ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2 43.85829265575387 0.0542763391141878 3 {[DA]|[EG]}YQV 5 4 32.224 0.0 0.0 3.1952 0.0 0.0 0.0 429.2368269169429 429.2368269169429 3.3927186071611715 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.3807196863200844 + {[DA]|[EG]}YQV 3.1952 + + 97 1 1.411 43860.7 1.0 13652 5813 19466 HBL1_DMSO_200M_050219_1,19467 HBL1_DMSO_200M_050219_1,19467,DAYQVLSTL True True DAYQVLSTL 93.596743 505.263934314251 103446660.0 19466.0 ENSG00000101972|ENST00000371145|STAG2;;nc|ENSG00000101972|Q8N3U4|STAG2 6.779843648274739 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19468 93.598 54.0 1005800.0 25 0 93041.0 + 39520 VAVFAGIIFV 10 83 518.3156571336139 1034.6167613340276 2 518.3158447146416 MULTI CID FTMS 0 0 0 19466 475856.96875 0.4688628536503132 3 -0.3055191040039062 2 Unmodified _VAVFAGIIFV_ REV__ENST00000554295.1_1_12:98849015-98849897:-|nuORF 24.67388899826682 0.4143206957119831 3 {[VA]|[{I|L}G]}V 3 -1 33.557 0.0 0.0 3.2434 0.0 0.0 0.0 762.4192875393588 762.4192875393588 10.536049848239344 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}V 3.2434 + + 185 1 1.411 50240.7 1.0 13653 5813 19466 HBL1_DMSO_200M_050219_1,19468 HBL1_DMSO_200M_050219_1,19468,VAVFAGIIFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19469 93.6 68.0 1253600.0 25 0 146460.0 + 1256 AILKELVTL 9 95 500.3257630245113 998.6369731158228 2 500.3262817263603 MULTI CID FTMS 0 0 0 19466 1075925.375 1.0 0 0.0 3 Unmodified _AILKELVTL_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF 62.57269311338072 0.0246576765497938 3 [{I|L}A]{I|L}[VS]A{I|L}VT{I|L} 10 3 + 52.145 0.0 0.0 5.2216 5.2216 77.211 0.0 0.0 0.0 2.7815125038364386 3.629909193596532 2.7815125038364386 2.5134875797167666 0 1.6237125054200234 1.6989700043360187 0.3054621874040891 0.0 [{I|L}A]{I|L}[VS]A{I|L}VT{I|L};[{I|L}A][VS]{I|L}A{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}A{I|L}VT{I|L};{[VA]|[{I|L}G]}S{I|L}{I|L}A{I|L}VT{I|L};[{I|L}A]{I|L}[TA]{I|L}[{I|L}A]T{I|L};[{I|L}A]{I|L}[TA]VVVT{I|L};[{I|L}A]{I|L}[TA]{I|L}T{I|L}[{I|L}A];[{I|L}T][VG]{I|L}A{I|L}VT{I|L};{[TV]|[{I|L}S]}G{I|L}{I|L}A{I|L}VT{I|L};[{I|L}A][VS]V{I|L}[{I|L}A]T{I|L} 5.2216;4.9699;4.9431;4.4081;3.9424;3.9424;3.92;3.8447;3.7304;3.6908 -;-;-;-;-;-;-;-;-;- 1118 1 1.411 68880.2 1.0 13654 5813 19466 HBL1_DMSO_200M_050219_1,19469 HBL1_DMSO_200M_050219_1,19469,AILKELVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19470 93.601 38.0 1385700.0 25 0 137770.0 + 9652 FLPDPSALQNL 11 81 607.8245097319684 1213.6344665307367 2 607.8247558474541 MULTI CID FTMS 0 0 0 19466 1074680.0 0.5622635623528319 -1 0.080810546875 4 Unmodified _FLPDPSALQNL_ ENSG00000158019|ENST00000379624|BABAM2;nc|ENSG00000158019|Q9NXR7-1|BABAM2;nc|ENSG00000158019|Q9NXR7-3|BABAM2;nc|ENSG00000158019|Q9NXR7-4|BABAM2 43.77239144664712 0.1542841003880809 3 {I|L}DP[HT]QN{I|L} 8 5 28.37 0.0 0.0 2.3376 0.0 0.0 277.1753733684305 0.0 277.1753733684305 0.0 12.90775268610524 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.6505149978319906 {I|L}DP[HT]QN{I|L} 2.3376 - 785 + 1 1.411 44419.3 1.0 13655 5813 19466 HBL1_DMSO_200M_050219_1,19470 HBL1_DMSO_200M_050219_1,19470,FLPDPSALQNL False True FLPDPSALQNL 93.600939 607.8277 45614696.0 19466.0 nc|ENSG00000158019|Q9NXR7-4|BABAM2;;nc|ENSG00000158019|Q9NXR7-3|BABAM2;;nc|ENSG00000158019|Q9NXR7-1|BABAM2;;ENSG00000158019|ENST00000379624|BABAM2 5.495708624521892 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19471 93.603 104.0 747630.0 25 0 83604.0 + 9886 FPFPTPPSV 9 117 494.7607669353666 987.5069809375332 2 494.7609741091728 MULTI CID FTMS 0 0 0 19466 461375.8125 0.6210067661184285 1 -0.14508056640625 5 Unmodified _FPFPTPPSV_ ENSG00000150990|ENST00000308736|DHX37 81.86404211737425 0.017065112157077 3 {I|L}{M(Oxidation (M))|F}PPSV 6 4 43.893 0.0 0.0 4.4449 0.0 0.0 329.1574297194422 0.0 329.1574297194422 0.0 16.880843058906834 0.0 0.0 0 0.9247425010840048 0.0 1.274227503252014 0.0 {I|L}{M(Oxidation (M))|F}PPSV 4.4449 - 740 + 1 1.411 62363.0 1.0 13656 5813 19466 HBL1_DMSO_200M_050219_1,19471 HBL1_DMSO_200M_050219_1,19471,FPFPTPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19472 93.606 147.0 628920.0 25 0 91488.0 + 37325 TIVGVLQSI 9 124 465.2871294596233 928.5597059860468 2 465.2874938845634 MULTI CID FTMS 0 0 0 19466 457122.625 0.01406239434884 14 -1.5626602172851562 6 Unmodified _TIVGVLQSI_ REV__nc|ENSG00000100106|Q9H2D6-6|TRIOBP 43.85829265575387 0.0542763391141878 3 {[TV]|[{I|L}S]}[VG]{I|L}{I|L}QS{I|L} 9 -1 + 54.845 0.0 0.0 5.9065 5.9065 85.266 0.0 0.0 0.0 9.34722834861013 7.504311474114331 7.504311474114331 7.14590680728881 0 1.1549471895720984 2.0 0.6694451763165201 0.0 {[TV]|[{I|L}S]}[VG]{I|L}{I|L}QS{I|L};{[TV]|[{I|L}S]}[VG]{I|L}Q{I|L}S{I|L};{[TV]|[{I|L}S]}[VG]{I|L}{I|L}[AG]S{I|L};[{I|L}T]AA{I|L}{I|L}QS{I|L};{[TV]|[{I|L}S]}[VG]{I|L}[AG]{I|L}S{I|L};[{I|L}T]AA{I|L}Q{I|L}S{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L}QS{I|L};[{I|L}T]AA{I|L}{I|L}[AG]S{I|L};[VS]VA{I|L}{I|L}QS{I|L};[VS]G{I|L}{I|L}{I|L}QS{I|L} 5.9065;5.1369;4.9148;4.8999;4.1453;4.1303;3.9672;3.9082;3.5082;3.3983 -;-;-;-;-;-;-;-;-;- 747 1 1.411 77172.4 1.0 13657 5813 19466 HBL1_DMSO_200M_050219_1,19472 HBL1_DMSO_200M_050219_1,19472,TIVGVLQSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19473 93.608 64.0 1199900.0 25 0 133020.0 + 40515 VIVELIYKV 9 119 538.3418222707057 1074.6690916082114 2 538.3423339724541 MULTI CID FTMS 0 0 0 19466 367992.125 0.0689525148719516 7 -0.7375640869140625 7 Unmodified _VIVELIYKV_ ENSG00000129083|ENST00000439561|COPB1 30.7034409873982 0.1405282614900322 3 [{I|L}V]VE{I|L}{I|L}YKV 9 0 + 69.025 0.0 0.0 6.423 6.423 92.364 0.0 0.0 0.0 26.79892479403911 5.898255349109505 5.898255349109505 24.398962788844827 0 1.298455006504028 2.0 0.0 0.0 + + [{I|L}V]VE{I|L}{I|L}YKV;[{I|L}V]VE[YV]K{I|L}{I|L};[{I|L}V]V{I|L}{I|L}EYKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EVTK{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EV[K{I|L}]T{I|L} 6.423;4.1526;3.7115;3.2148;2.1861 +;-;-;-;- + 849 + 1 1.411 63982.0 1.0 13658 5813 19466 HBL1_DMSO_200M_050219_1,19473 HBL1_DMSO_200M_050219_1,19473,VIVELIYKV False True VIVELIYKV 93.607651 538.342333972454 178967844.0 19466.0 ENSG00000129083|ENST00000439561|COPB1 5.821745236714681 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19474 93.611 142.0 678440.0 25 0 59865.0 + 41969 VQLPDGGWGL 10 137 521.2714248951427 1040.5282968570853 2 521.2716552615166 MULTI CID FTMS 0 0 0 19466 366868.15625 0.3428899078549424 -1 0.080810546875 8 Unmodified _VQLPDGGWGL_ ENSG00000160285|ENST00000397728|LSS;nc|ENSG00000160285|P48449-2|LSS 30.63653989081413 0.2803493085145199 3 {[VA]|[{I|L}G]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5 7 24.371 0.0 0.0 2.3422 0.0 0.0 0.0 516.2738772616352 516.2738772616352 5.073930987251387 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 {[VA]|[{I|L}G]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.3422 - 614 1 1.411 81476.8 1.0 13659 5813 19466 HBL1_DMSO_200M_050219_1,19474 HBL1_DMSO_200M_050219_1,19474,VQLPDGGWGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19475 93.612 72.0 721910.0 25 0 64237.0 + 12096 GQIDLLERL 9 79 528.8060836147177 1055.5976142962354 2 528.8062621951103 MULTI CID FTMS 0 0 0 19466 201121.28125 0.0429222822356834 -4 0.39361572265625 9 Unmodified _GQIDLLERL_ ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC 23.78978130925829 0.2284941198415988 3 {[QG]|[NA]}{I|L}D{I|L}{I|L}ER{I|L} 9 0 + 48.153 0.0 0.0 4.5617 4.5617 78.343 0.0 0.0 0.0 31.197887582883933 11.42667503568731 11.42667503568731 4.771212547196626 0 0.5 0.0 0.0 0.0 + + {[QG]|[NA]}{I|L}D{I|L}{I|L}ER{I|L};{[QG]|[NA]}{I|L}{I|L}D{I|L}ER{I|L};{[QG]|[NA]}{I|L}D{I|L}{I|L}[NG]KV;{[QG]|[NA]}{I|L}D{I|L}{I|L}[W{I|L}]V;{[QG]|[NA]}{I|L}{I|L}D{I|L}[NG]KV;{[QG]|[NA]}{I|L}{I|L}D{I|L}[W{I|L}]V;[AG]VWHV{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QV]|[N{I|L}]|[RA]|[KV]}WHV{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[AG]VWH{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QV]|[N{I|L}]|[RA]|[KV]}WH{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.5617;4.1097;3.3969;3.2301;2.9449;2.7781;0.48806;0.32498;0.20289;0.039808 +;-;-;-;-;-;-;-;-;- + 183 + 1 1.411 50271.9 1.0 13660 5813 19466 HBL1_DMSO_200M_050219_1,19475 HBL1_DMSO_200M_050219_1,19475,GQIDLLERL False True GQIDLLERL 93.612214 528.80626219511 90617832.0 19466.0 ENSG00000134982|ENST00000257430|APC;;nc|ENSG00000134982|P25054-3|APC;;nc|ENSG00000134982|P25054-2|APC 4.517914295196533 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19476 93.625 726.0 325270.0 25 0 26829.0 + 11683 GLFPSNFVTT 10 223 541.7798446108555 1081.545136288511 2 541.7790405154228 MULTI CID FTMS 0 0 0 19466 204294.484375 0.9755254767708064 1 -0.14508056640625 10 Unmodified _GLFPSNFVTT_ ENSG00000115145|ENST00000263904|STAM2;ENST00000463854.5_1_2:152988626-153032156:-|nuORF;ENST00000482997.5_1_2:152982712-153032156:-|nuORF;nc|ENSG00000115145|O75886-2|STAM2 32.78568957990786 0.2337485590374503 3 [PS]N{M(Oxidation (M))|F}VA{M(Oxidation (M))|F} 7 5 29.32 0.0 0.0 2.7109 0.0 0.0 0.0 316.1507298766533 316.1507298766533 0.0573572012542875 0.0 0.0 0.0 0 0.0 0.4559319556497244 0.0484550065040282 1.086696871556164 [PS]N{M(Oxidation (M))|F}VA{M(Oxidation (M))|F} 2.7109 - 4737 1 1.411 185584.9 1.0 13661 5813 19466 HBL1_DMSO_200M_050219_1,19476 HBL1_DMSO_200M_050219_1,19476,GLFPSNFVTT False True GLFPSNFVTT 93.624816 541.779040515423 1505604.375 19466.0 ENST00000482997.5_1_2:152982712-153032156:-|nuORF;;ENST00000463854.5_1_2:152988626-153032156:-|nuORF;;ENSG00000115145|ENST00000263904|STAM2;;nc|ENSG00000115145|O75886-2|STAM2 4.148296117782593 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19477 93.639 800.0 253850.0 25 0 21967.0 + 45038 YPWGVVEV 8 192 474.7448286261317 947.4751043190636 2 474.7454101443291 MULTI CID FTMS 0 0 0 19466 145935.9375 1.0 0 0.0 11 Unmodified _YPWGVVEV_ ENSG00000168385|ENST00000391971|SEPTIN2;ENST00000481500.1_1_2:242277175-242285749:+|nuORF;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2 30.19836241096484 0.408853459428176 3 [{M(Oxidation (M))|F}V]YVVG[HQ] 8 7 + 34.548 0.0 0.0 3.6463 3.6463 51.577 0.0 0.0 0.0 0.2680249241196719 0.2680249241196719 0.2680249241196719 0.0 0 0.1694451763165201 1.3010299956639813 0.0 0.0 [{M(Oxidation (M))|F}V]YVVG[HQ];[{M(Oxidation (M))|F}V]VYVG[HQ];HHVR{[CP]|[EA]}TV;[WP]KYVQQ;[{M(Oxidation (M))|F}V]VVYG[HQ];{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}RVQQ;HHVR[WD]V;HHVR{[CP]|[EA]}S{I|L};[{M(Oxidation (M))|F}V]VQDPM{I|L};[WP]YKVQQ 3.6463;3.6463;3.2974;3.2398;3.0109;3.002;2.9897;2.9797;2.9718;2.8198 -;-;-;-;-;-;-;-;-;- 1565 + 1 1.411 156112.9 0.8199999928474426 13662 5813 19466 HBL1_DMSO_200M_050219_1,19477 HBL1_DMSO_200M_050219_1,19477,YPWGVVEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19478 93.652 800.0 164430.0 25 0 30850.0 + 3813 DAIRILGI 8 162 435.77388645061177 869.5332199680236 2 435.7738525271416 MULTI CID FTMS 0 0 0 19466 115353.203125 1.0 0 0.0 12 Unmodified _DAIRILGI_ ENSG00000105926|ENST00000222644|PALS2 34.40172386719151 0.3279500639400574 3 {[DA]|[EG]}{I|L}R{I|L}{I|L}G{I|L} 8 0 + 50.367 0.0 0.0 5.7924 5.7924 88.362 0.0 0.0 0.0 11.020599913279623 16.40978057358332 11.020599913279623 11.020599913279623 0 1.274227503252014 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}{I|L}R{I|L}{I|L}G{I|L};{[VA]|[{I|L}G]}ER{I|L}{I|L}G{I|L};{I|L}{I|L}{[RE]|[WV]}G{I|L}G{I|L};{I|L}{I|L}{[RE]|[WV]}{I|L}GG{I|L};[R{I|L}]AD{I|L}{I|L}G{I|L};{I|L}{I|L}{[RE]|[WV]}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}AR{I|L}{I|L}G{I|L};[KP]{[ET]|[MV]}{I|L}{I|L}G{I|L};[R{I|L}]{[QN]|[E{I|L}]|[KN]}{I|L}GG{I|L};[R{I|L}]{[QN]|[E{I|L}]|[KN]}G{I|L}G{I|L} 5.7924;4.525;3.7929;3.7929;3.38;3.1666;2.9173;2.1442;2.1185;2.1185 +;-;-;-;-;-;-;-;-;- + 351 1 1.411 105675.8 0.699999988079071 13663 5813 19466 HBL1_DMSO_200M_050219_1,19478 HBL1_DMSO_200M_050219_1,19478,DAIRILGI False True DAIRILGI 93.652445 435.773852527142 952307.0 19466.0 ENSG00000105926|ENST00000222644|PALS2 3.5473855336507163 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19479 93.666 800.0 138000.0 25 0 7407.1 -1 0 157 655.5757439414184 2618.273869899273 4 655.8240234255791 MULTI CID FTMS 0 0 0 19466 111370.0078125 0.180453181085593 8 -0.8388137817382812 13 3 {[TV]|[{I|L}S]}V{[QV]|[N{I|L}]|[RA]|[KV]}ENVWG 10 -1 28.672 0.0 0.0 1.0951 0.0 0.0 0.0 1503.6952315538235 1503.6952315538235 8.335461433134508 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.1382104921644452 0.0 {[TV]|[{I|L}S]}V{[QV]|[N{I|L}]|[RA]|[KV]}ENVWG 1.0951 - 1428 1 1.411 87451.2 0.959999978542328 13664 5813 19466 HBL1_DMSO_200M_050219_1,19479 HBL1_DMSO_200M_050219_1,19479, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19480 93.68 800.0 199960.0 25 0 13566.0 + -1 FPYPMYSRDYVYV 13 142 850.3956745616748 1698.7767961901495 2 850.9009277224541 MULTI CID FTMS 0 0 0 19466 112547.9453125 1.0 0 0.0 14 ENSG00000084090|ENST00000337288|STARD7 3 [{I|L}P]AEVP{I|L}{I|L} 8 -1 40.565 0.0 0.0 2.3879 0.0 0.0 0.0 863.2444835282932 863.2444835282932 3.073204813596277 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.7614393726401688 0.0 [{I|L}P]AEVP{I|L}{I|L} 2.3879 - 1792 1 1.411 108910.2 0.9900000095367432 13665 5813 19466 HBL1_DMSO_200M_050219_1,19480 HBL1_DMSO_200M_050219_1,19480, False False FPYPMYSRDYVYV 93.680134 850.3999 3158037.5 19466.0 ENSG00000084090|ENST00000337288|STARD7 6.060228665669759 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19481 93.695 800.0 203260.0 25 0 12187.0 + 44159 YLDPRLAFTV 10 187 597.8280859768873 0 597.8290283083916 PEAK CID FTMS 0 0 0 19466 103991.7265625 0.8353849967678973 1 -0.14508056640625 15 Unmodified _YLDPRLAFTV_ ENSG00000186153|ENST00000566780|WWOX;ENST00000561846.5_1_16:78133657-78314740:+|nuORF;ENST00000562214.5_1_16:78133657-78152856:+|nuORF;ENST00000569332.5_1_16:78133625-79245690:+|nuORF;nc|ENSG00000186153|Q9NZC7-2|WWOX;nc|ENSG00000186153|Q9NZC7-3|WWOX;nc|ENSG00000186153|Q9NZC7-5|WWOX;nc|ENSG00000186153|Q9NZC7-6|WWOX;nc|ENSG00000186153|Q9NZC7-7|WWOX 40.23920728925047 0.1079172354845404 3 MDV 3 8 15.679 0.0 0.0 1.3135 0.0 0.0 145.09933494029957 700.3787325494749 845.4780674897745 0.0 0.0 0.0 0.0 0 0.6382104921644451 0.0 0.0 0.0 MDV 1.3135 - 743 + 1 1.411 122761.7 0.8399999737739563 13666 5813 19466 HBL1_DMSO_200M_050219_1,19481 HBL1_DMSO_200M_050219_1,19481,YLDPRLAFTV True True YLDPRLAFTV 93.69543 597.829028308392 1224819.125 19466.0 nc|ENSG00000186153|Q9NZC7-5|WWOX;;ENST00000562214.5_1_16:78133657-78152856:+|nuORF;;ENSG00000186153|ENST00000566780|WWOX;;ENST00000569332.5_1_16:78133625-79245690:+|nuORF;;nc|ENSG00000186153|Q9NZC7-7|WWOX;;nc|ENSG00000186153|Q9NZC7-3|WWOX;;ENST00000561846.5_1_16:78133657-78314740:+|nuORF;;nc|ENSG00000186153|Q9NZC7-2|WWOX;;nc|ENSG00000186153|Q9NZC7-6|WWOX 5.553524812062581 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19482 93.709 800.0 271250.0 25 0 18218.0 + 4627 DAYVKVPQADV 11 215 602.8129063721389 1203.6112598110776 2 602.8143188357353 MULTI CID FTMS 0 0 0 19466 91233.8828125 0.7938517421190178 -1 0.080810546875 16 Unmodified _DAYVKVPQADV_ REV__ENSG00000095059|ENST00000210060|DHPS;REV__ENST00000600510.1_1_19:12786654-12786995:-|nuORF;REV__nc|ENSG00000095059|P49366-2|DHPS;REV__nc|ENSG00000095059|P49366-3|DHPS 38.16057220495361 0.240731410942851 3 DAYV{I|L}{[RE]|[WV]}[EP]{I|L} 10 -1 + 59.662 0.0 0.0 4.957 4.957 72.405 0.0 0.0 0.0 12.609849771020478 0.2171907975309892 0.2171907975309892 0.2171907975309892 0 1.5114393726401687 1.3979400086720375 0.4247425010840047 0.0 DAYV{I|L}{[RE]|[WV]}[EP]{I|L};DAYV{I|L}[TP]TPEV;DAYV{I|L}[TP]TEPV;DAYV{I|L}[TP]S[EP]{I|L};DAYV{I|L}[TP][EP]TV;DAYV{I|L}[TP]TPD{I|L};DAYV{I|L}[HS]{[TV]|[{I|L}S]}TV;DAYV{I|L}[TP][EP]S{I|L};DAYV{I|L}[TP][DP]T{I|L};DAYV[PG][RK]AEV 4.957;4.9389;4.9146;4.8568;4.7233;4.624;4.4732;4.4084;4.2948;4.2375 -;-;-;-;-;-;-;-;-;- 3875 + 1 1.411 151402.4 0.8199999928474426 13667 5813 19466 HBL1_DMSO_200M_050219_1,19482 HBL1_DMSO_200M_050219_1,19482,DAYVKVPQADV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19483 93.724 800.0 153120.0 25 0 21895.0 + 22442 LPTPRLLHYMI 11 144 677.3903664194603 1352.7661799057205 2 677.3878661990166 MULTI CID FTMS 0 0 0 19466 93601.2421875 0.7665719362818568 1 -0.14508056640625 17 Unmodified _LPTPRLLHYMI_ REV__ENST00000471115.5_1_1:85724305-85725048:-|nuORF 16.149105407346934 0.6992268271266642 3 [TP]{I|L}RP{I|L} 6 -1 39.72 0.0 0.0 2.9362 0.0 0.0 0.0 672.328532771208 672.328532771208 6.774426353194009 0.0 0.0 0.0 0 0.0 1.154901959985743 1.1215624624795442 0.0 [TP]{I|L}RP{I|L} 2.9362 - 1136 1 1.411 91403.5 0.8299999833106995 13668 5813 19466 HBL1_DMSO_200M_050219_1,19483 HBL1_DMSO_200M_050219_1,19483,LPTPRLLHYMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19484 93.738 771.0 156780.0 25 0 32149.0 + -1 RQLDSADSFFL 11 139 649.8220128617214 1297.6294727902427 2 649.8215820193291 MULTI CID FTMS 0 0 0 19466 94825.6015625 0.6504516895742005 -1 0.080810546875 18 Carbamidomethyl (C) _LTRPNC(Carbamidomethyl (C))MFFL_ ENST00000557612.5_1_14:70793009-70793102:-|nuORF 34.40172386719151 0.2166836008404837 3 [VS]A{I|L}[DN]ADS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 12 -1 + 87.054 0.0 0.0 6.7087 6.7087 81.154 0.0 0.0 0.0 4.13878959389973 16.611814434466197 4.13878959389973 1.840601887269571 0 1.3494850021680094 0.7958800173440752 1.6549471895720984 0.0 [VS]A{I|L}[DN]ADS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[VS]A{I|L}{[WN]|[YH]}DS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}G{I|L}[DN]ADS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[VG]T{I|L}[DN]ADS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}G{I|L}{[WN]|[YH]}DS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[VG]T{I|L}{[WN]|[YH]}DS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[VS]A{I|L}[DN]WS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[VS]A[WR]ADS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}K[DN]ADS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[{I|L}T][VG][DN]ADS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 6.7087;6.5669;6.3898;6.3607;6.2479;6.2188;6.1992;5.9485;5.9257;5.9044 -;-;-;-;-;-;-;-;-;- 1109 1 1.411 96214.0 1.0 13669 5813 19466 HBL1_DMSO_200M_050219_1,19484 HBL1_DMSO_200M_050219_1,19484,LTRPNCMFFL False False RQLDSADSFFL 93.737632 649.821582019329 1344083.25 19466.0 ENST00000557612.5_1_14:70793009-70793102:-|nuORF 6.950924873352051 2.0 False 11.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19486 93.742 1.0 65923000.0 25 0 12305000.0 + 4664 DAYVLPKLYV 10 70 590.8342767634228 1179.6540005936456 2 590.8350707888603 MULTI CID FTMS 0 0 0 19485 57364680.0 1.0 0 0.0 1 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 38.17557092003332 0.1768326257063233 3 {[DA]|[EG]}YV{I|L} 5 5 39.693 0.0 0.0 3.3648 0.0 0.0 0.0 615.3510580489768 615.3510580489768 0.3895965163193438 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YV{I|L} 3.3648 + + 253 1 1.404 57754.8 1.0 13670 5814 19485 HBL1_DMSO_200M_050219_1,19486 HBL1_DMSO_200M_050219_1,19486,DAYVLPKLYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19487 93.743 3.8 16133000.0 25 0 1423700.0 + 5645 DPFAFIHKI 9 81 544.3002364449206 1086.5859199566412 2 544.3007690310478 MULTI CID FTMS 0 0 0 19485 15108978.0 1.0 0 0.0 2 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 62.57269311338072 0.0246576765497938 3 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H[K{I|L}] 9 0 + 88.567 0.0 0.0 8.1509 8.1509 98.037 0.0 0.0 0.0 58.72363747448347 7.376430167995878 7.376430167995878 88.56668758921828 0 1.610924374808178 2.0 0.0 0.2614393726401688 + + DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H[K{I|L}] 8.1509 + + 213 + 1 1.404 53543.4 1.0 13671 5814 19485 HBL1_DMSO_200M_050219_1,19487 HBL1_DMSO_200M_050219_1,19487,DPFAFIHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19488 93.744 8.4 6463300.0 25 0 664730.0 + 29203 QGIPVYLFS 9 71 512.2791580445313 1022.5437631558626 2 512.2794067263603 MULTI CID FTMS 0 0 0 19485 6915611.5 0.7083526495577669 2 -0.1604385375976562 3 Unmodified _QGIPVYLFS_ ENSG00000169299|ENST00000381967|PGM2 26.88365393820708 0.1891292719743517 3 [VP]NA{I|L}Y 6 7 41.405 0.0 0.0 4.0492 0.0 0.0 0.0 362.1701572790494 362.1701572790494 15.845078002212889 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.7302046884880937 [VP]NA{I|L}Y 4.0492 - 142 1 1.404 45891.5 1.0 13672 5814 19485 HBL1_DMSO_200M_050219_1,19488 HBL1_DMSO_200M_050219_1,19488,QGIPVYLFS False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19489 93.745 8.3 5401700.0 25 0 945390.0 + 5178 DINLILALS 9 63 486.29224058057 970.56992822794 2 486.2924072146416 MULTI CID FTMS 0 0 0 19485 6812748.5 0.3149828003702814 -3 0.3137130737304687 4 Unmodified _DINLILALS_ ENST00000502604.5_2_5:68550491-68551353:+|nuORF 21.53697664764585 0.2571576504437394 3 {I|L}{I|L}[DN]{I|L}{I|L} 6 5 25.379 0.0 0.0 2.6149 0.0 0.0 0.0 286.1369197653026 286.1369197653026 -0.0269751594335332 0.0 -0.0269751594335332 0.0 0 0.0 1.6989700043360187 0.0 0.3494850021680094 {I|L}{I|L}[DN]{I|L}{I|L} 2.6149 - 368 1 1.404 41870.9 1.0 13673 5814 19485 HBL1_DMSO_200M_050219_1,19489 HBL1_DMSO_200M_050219_1,19489,DINLILALS False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19490 93.747 20.0 2816600.0 25 0 192690.0 + 44580 YPFINSRIITV 11 62 661.8768240194503 1321.7390951057005 2 661.8773071169853 MULTI CID FTMS 0 0 0 19485 2352683.5 0.7435703367810657 -3 0.3137130737304687 5 Unmodified _YPFINSRIITV_ ENSG00000037474|ENST00000264670|NSUN2;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 30.43146612281011 0.3776625119172622 3 YP{M(Oxidation (M))|F}{I|L}N 5 6 66.766 0.0 0.0 5.0514 0.0 0.0 0.0 684.4034743258054 684.4034743258054 44.854771935914 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 + YP{M(Oxidation (M))|F}{I|L}N 5.0514 + + 51 + 1 1.404 49611.4 1.0 13674 5814 19485 HBL1_DMSO_200M_050219_1,19490 HBL1_DMSO_200M_050219_1,19490,YPFINSRIITV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19491 93.748 41.0 1263300.0 25 0 144200.0 + 15771 YGIKDDVFLSV 11 78 628.3322460396369 1254.6499391460736 2 628.3323852419853 MULTI CID FTMS 0 0 0 19485 1564842.625 0.3114825352689922 2 -0.1604385375976562 6 Unmodified _ISDVVNYFLSV_ nc|ENSG00000134333|P00338-4|LDHA;ENSG00000134333|ENST00000422447|LDHA;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;nc|ENSG00000134333|P00338-3|LDHA 30.7034409873982 0.3712764582118616 3 {M(Oxidation (M))|F}KSV{M(Oxidation (M))|F}{I|L}W 7 8 53.492 0.0 0.0 4.2635 0.0 0.0 329.12251479316564 0.0 329.12251479316564 0.0 35.4203356740949 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.3807196863200844 {M(Oxidation (M))|F}KSV{M(Oxidation (M))|F}{I|L}W 4.2635 - 449 1 1.404 47385.7 1.0 13675 5814 19485 HBL1_DMSO_200M_050219_1,19491 HBL1_DMSO_200M_050219_1,19491,ISDVVNYFLSV False False YGIKDDVFLSV 93.747715 628.332385241985 123195816.0 19485.0 nc|ENSG00000134333|P00338-4|LDHA;;ENSG00000134333|ENST00000422447|LDHA;;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;;nc|ENSG00000134333|P00338-3|LDHA 4.689476807912191 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19492 93.749 47.0 1106300.0 25 0 149480.0 + 35880 SVLPDSVEIGL 11 76 564.810817672093 1127.607082410986 2 564.8110229372978 MULTI CID FTMS 0 0 0 19485 1030506.4375 0.762532500386166 -1 0.14508056640625 7 Unmodified _SVLPDSVEIGL_ ENSG00000020129|ENST00000373243|NCDN;nc|ENSG00000020129|Q9UBB6-2|NCDN 32.89776655970281 0.3218023389984559 3 [DP]SVE{I|L}SV 8 5 55.399 0.0 0.0 4.913 0.0 0.0 0.0 298.17608810850464 298.17608810850464 30.477372199242296 0.0 0.0 0.0 0 0.4247425010840047 0.0 2.079689690656103 0.0 [DP]SVE{I|L}SV 4.913 - 350 1 1.404 44496.1 1.0 13676 5814 19485 HBL1_DMSO_200M_050219_1,19492 HBL1_DMSO_200M_050219_1,19492,SVLPDSVEIGL False True SVLPDSVEIGL 93.748996 564.811022937298 11373540.0 19485.0 nc|ENSG00000020129|Q9UBB6-2|NCDN;;ENSG00000020129|ENST00000373243|NCDN 1.4559770425160723 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19493 93.751 73.0 1233500.0 25 0 145320.0 + 5649 DPFAFIHKI 9 105 363.2027334629652 1086.5863709890957 3 363.2025634646416 MULTI CID FTMS 0 0 0 19485 884084.8125 0.9885523011686776 -1 0.14508056640625 8 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 39.94969957227396 0.0757326808254658 3 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H{I|L}K 9 2 + 85.614 0.0 0.0 7.8792 7.8792 84.402 0.0 0.0 0.0 33.46787486224656 2.04119982655925 2.04119982655925 2.04119982655925 0 0.816901560044258 1.6989700043360187 0.0 0.1861818737241735 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H{I|L}K;DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L};DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}{I|L}HK;DP{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}H{I|L}K;DP{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}HK{I|L};DP{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}H{I|L}K;DP{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}{I|L}HK;DP{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}H{I|L}K;DP{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}HK{I|L};DP{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}HK{I|L} 7.8792;7.6913;7.2687;7.2359;7.0481;6.6778;6.6255;6.5105;6.4899;6.3226 -;+;-;-;-;-;-;-;-;- + 458 + 1 1.404 82145.5 1.0 13677 5814 19485 HBL1_DMSO_200M_050219_1,19493 HBL1_DMSO_200M_050219_1,19493,DPFAFIHKI True True DPFAFIHKI 93.750686 363.202563464642 801255714.0 19485.0 nc|ENSG00000117139|Q9UGL1-2|KDM5B;;ENSG00000117139|ENST00000367265|KDM5B 8.48198413848877 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19494 93.752 77.0 787780.0 25 0 87403.0 + 17216 KLLEYIEEI 9 99 575.3233664411573 1148.6321799491143 2 575.3237792849541 MULTI CID FTMS 0 0 0 19485 721540.6875 0.1774571837977077 4 -0.3692779541015625 9 Unmodified _KLLEYIEEI_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 46.0223103267499 0.0490911897871712 3 {[QN]|[E{I|L}]|[KN]}{I|L}KY{I|L}EE{I|L} 9 2 + 71.623 0.0 0.0 6.2355 6.2355 76.813 0.0 0.0 0.0 0.2646790471890057 16.478174818886366 0.2646790471890057 0.2646790471890057 0 0.9749073637206092 0.0 1.0269763493273798 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}KY{I|L}EE{I|L};[Y{I|L}]E{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KYE{I|L}E{I|L};[Y{I|L}]E{I|L}KE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}KE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}K{I|L}YEE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}YK{I|L}EE{I|L};EE{I|L}Y{I|L}K{I|L}E{I|L};[Y{I|L}]E{I|L}EK{I|L}E{I|L} 6.2355;6.2124;6.1278;5.8968;5.8737;5.7891;5.7113;5.6036;5.5216;5.3496 -;-;-;-;-;-;-;-;-;- 367 1 1.404 51629.1 1.0 13678 5814 19485 HBL1_DMSO_200M_050219_1,19494 HBL1_DMSO_200M_050219_1,19494,KLLEYIEEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19495 93.754 44.0 1386500.0 25 0 140550.0 + 44753 YPLEVTKLI 9 100 538.3230494351061 1074.631545937012 2 538.3235351443291 MULTI CID FTMS 0 0 0 19485 681800.5 1.0 0 0.0 10 Unmodified _YPLEVTKLI_ ENSG00000104884|ENST00000391945|ERCC2;nc|ENSG00000104884|P18074-2|ERCC2 55.50274090549119 0.0285720310785888 3 YP{I|L}EV[KT]{I|L}{I|L} 9 0 + 59.144 0.0 0.0 5.5037 5.5037 80.394 0.0 0.0 0.0 8.249781076941417 8.059750417545686 8.059750417545686 3.810542740131503 0 1.7803695511246984 1.3010299956639813 0.5 0.0 + + YP{I|L}EV[KT]{I|L}{I|L};YP{I|L}EV[K{I|L}]T{I|L};[{I|L}V]ETK{I|L}{M(Oxidation (M))|F}{I|L}{I|L};YP{I|L}M{I|L}{[NV]|[RG]}{I|L}{I|L};[{I|L}V]ETKPY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}VTK{I|L}{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}V]E{I|L}[KT]{M(Oxidation (M))|F}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}TK{I|L}{M(Oxidation (M))|F}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EV[KT]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}VTKPY{I|L}{I|L} 5.5037;5.1491;4.5312;4.302;3.6682;3.3307;3.2688;3.106;2.6335;2.4678 +;-;-;-;-;-;-;-;+;- + 860 + 1 1.404 55188.7 1.0 13679 5814 19485 HBL1_DMSO_200M_050219_1,19495 HBL1_DMSO_200M_050219_1,19495,YPLEVTKLI True True YPLEVTKLI 93.7537 538.323535144329 4725913.0 19485.0 nc|ENSG00000104884|P18074-2|ERCC2;;ENSG00000104884|ENST00000391945|ERCC2 2.468557675679525 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19496 93.757 158.0 874540.0 25 0 104190.0 15154 INYVEVIVPL 10 108 579.8420521051584 1157.6695512771166 2 579.3379394412041 MULTI CID FTMS 0 0 0 19485 697961.5 0.7860972497045285 1 -0.0687179565429687 11 Unmodified _INYVEVIVPL_ ENSG00000140600|ENST00000427482|SH3GL3;ENST00000467735.2_1_15:84280269-84287036:+|nuORF;nc|ENSG00000140600|Q99963-2|SH3GL3;nc|ENSG00000140600|Q99963-3|SH3GL3 18.1463463914782 0.5430639438673815 3 EV{M(Oxidation (M))|F}P{I|L}G{I|L}E 8 8 61.939 0.0 0.0 5.3503 0.0 0.0 0.0 270.1572664850219 270.1572664850219 36.53319040378568 0.0 0.0 0.0 0 0.2134679910804404 0.6777807052660807 0.6307196863200843 0.0 EV{M(Oxidation (M))|F}P{I|L}G{I|L}E 5.3503 - 888 + 1 1.404 110877.0 1.0 13680 5814 19485 HBL1_DMSO_200M_050219_1,19496 HBL1_DMSO_200M_050219_1,19496,INYVEVIVPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19497 93.759 71.0 797890.0 25 0 109600.0 + 4493 DAYIMKELL 9 77 548.2910714084608 1094.5675898837214 2 548.2909423708916 MULTI CID FTMS 0 0 0 19485 682813.125 1.0 0 0.0 12 Unmodified _DAYIMKELL_ ENSG00000100077|ENST00000324198|GRK3;ENST00000455558.2_3_22:26000393-26080524:+|nuORF 60.07390631473393 0.0260411565414776 3 [WY]{I|L}MKE{I|L}{I|L} 8 2 + 40.252 0.0 0.0 3.6774 3.6774 76.881 0.0 0.0 0.0 2.697500819255509 2.4603102328201487 2.4603102328201487 5.950075808415463 0 1.274227503252014 0.0 1.055462187404089 0.0 [WY]{I|L}MKE{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{I|L}YW{I|L}{I|L};[Y{I|L}][QP]YW{I|L}{I|L};[Y{I|L}][QP]YGE{I|L}{I|L};[Y{I|L}][QP]{I|L}Y[W{I|L}];[Y{I|L}][QP]Y{I|L}[W{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}YW{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{I|L}YGE{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{I|L}{I|L}Y[W{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{I|L}Y{I|L}[W{I|L}] 3.6774;3.1338;2.9519;2.6603;2.6379;2.4771;2.4574;2.4541;2.4318;2.2709 -;-;-;-;-;-;-;-;-;- 205 + 1 1.404 48082.2 1.0 13681 5814 19485 HBL1_DMSO_200M_050219_1,19497 HBL1_DMSO_200M_050219_1,19497,DAYIMKELL True True DAYIMKELL 93.758529 548.290942370892 4974816.5 19485.0 ENSG00000100077|ENST00000324198|GRK3;;ENST00000455558.2_3_22:26000393-26080524:+|nuORF 6.889651298522949 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19498 93.76 53.0 1430000.0 25 0 234460.0 + 3754 DAHEFLNYL 9 79 561.264911950718 1120.515270968236 2 561.2649413943291 MULTI CID FTMS 0 0 0 19485 423968.53125 0.954869293972081 -1 0.14508056640625 13 Unmodified _DAHEFLNYL_ ENSG00000109189|ENST00000441222|USP46;ENSG00000152484|ENST00000282344|USP12;ENST00000514536.5_1_4:53464769-53497293:-|nuORF;nc|ENSG00000109189|P62068-2|USP46;nc|ENSG00000109189|P62068-3|USP46;nc|ENSG00000109189|P62068-4|USP46 24.020572477871973 0.2255576514309169 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DV[YT]N[Y{I|L}] 9 5 + 41.857 0.0 0.0 3.7355 3.7355 77.597 0.0 0.0 0.0 9.03089986991943 7.147642715192504 7.147642715192504 6.478174818886373 0 0.3494850021680094 1.5228787452803376 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DV[YT]N[Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[YK]W[Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}N[Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}N{I|L}{M(Oxidation (M))|F}[CS]M{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VD[YT]N[Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DV[YT]GG[Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VT{[YD]|[{M(Oxidation (M))|F}M]}N[Y{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VS[YE]N[Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}N{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}C{I|L};{[DA]|[EG]}HE{M(Oxidation (M))|F}{I|L}N[Y{I|L}] 3.7355;3.1574;3.1117;2.9296;2.9296;2.9138;2.884;2.7724;2.7316;2.6609 -;-;-;-;-;-;-;-;-;+ + 545 1 1.404 60197.9 1.0 13682 5814 19485 HBL1_DMSO_200M_050219_1,19498 HBL1_DMSO_200M_050219_1,19498,DAHEFLNYL False True DAHEFLNYL 93.759911 561.264941394329 3822358.5 19485.0 nc|ENSG00000109189|P62068-3|USP46;;ENST00000514536.5_1_4:53464769-53497293:-|nuORF;;ENSG00000152484|ENST00000282344|USP12;;nc|ENSG00000109189|P62068-4|USP46;;ENSG00000109189|ENST00000441222|USP46;;nc|ENSG00000109189|P62068-2|USP46 3.8548103968302407 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19499 93.763 153.0 1203300.0 25 0 150310.0 + 36310 SYLFSHVPL 9 155 531.7844631851925 1061.554373437185 2 531.7843505740166 MULTI CID FTMS 0 0 0 19485 391341.3125 0.1335669270571354 4 -0.3692779541015625 14 Unmodified _SYLFSHVPL_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 26.88365393820708 0.1891292719743517 3 {[TV]|[{I|L}S]}Y[RP]A{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 9 8 + 29.422 0.0 0.0 2.7716 2.7716 69.071 0.0 0.0 0.0 0.992192663132844 -1.9016201473920769 -1.9016201473920769 1.607942721838782 0 0.2742275032520141 1.5228787452803376 0.4337955442476159 0.0 {[TV]|[{I|L}S]}Y[RP]A{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[KP]{I|L}YDA{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[YV]T[RP]A{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]KYDA{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}KP{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}Y[RP]AV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}Y{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}Y[RP]{I|L}A{[QD]|[EN]|[WG]|[KD]|[RS]};[KP]{I|L}YDAV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP]{I|L}YW{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 2.7716;2.6201;2.3641;2.3597;2.262;2.2045;2.1563;2.0638;2.053;2.0351 -;-;-;-;-;-;-;-;-;- 5093 1 1.404 149054.3 1.0 13683 5814 19485 HBL1_DMSO_200M_050219_1,19499 HBL1_DMSO_200M_050219_1,19499,SYLFSHVPL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19500 93.767 198.0 491780.0 25 0 69710.0 + 4516 DAYLPLRL 8 99 480.7794978968272 959.5444428604544 2 480.7798950076103 MULTI CID FTMS 0 0 0 19485 359471.4375 0.0086425763218157 13 -1.4175796508789062 15 Unmodified _DAYLPLRL_ ENSG00000062822|ENST00000440232|POLD1 34.10243960390752 0.3329570729325616 3 {[DA]|[EG]}Y{I|L}{I|L}PR{I|L} 8 2 + 57.841 0.0 0.0 6.028 6.028 80.814 0.0 0.0 0.0 43.04789630410646 10.890625187447966 10.890625187447966 3.0102999566398125 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[DA]|[EG]}Y{I|L}{I|L}PR{I|L};{[DA]|[EG]}Y{I|L}P{I|L}R{I|L};{[DA]|[EG]}{I|L}Y{I|L}PR{I|L};{[DA]|[EG]}{I|L}YP{I|L}R{I|L} 6.028;5.7143;5.0097;4.6959 -;+;-;- + 106 + 1 1.404 79155.1 1.0 13684 5814 19485 HBL1_DMSO_200M_050219_1,19500 HBL1_DMSO_200M_050219_1,19500,DAYLPLRL False True DAYLPLRL 93.766742 480.77989500761 426667200.0 19485.0 ENSG00000062822|ENST00000440232|POLD1 6.0415364901224775 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19501 93.775 471.0 888590.0 25 0 139580.0 + 13588 HPLVILNI 8 120 918.5770397423544 917.5697632757542 1 918.5814697146416 MULTI CID FTMS 0 0 0 19485 363884.34375 0.1965832101990504 -3 0.3137130737304687 16 Unmodified _HPLVILNI_ ENSG00000168090|ENST00000303904|COPS6;ENST00000465027.1_1_7:99686595-99687052:+|nuORF;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 152.7845156700577 5.151486179319744e-06 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L} 8 0 + 88.153 0.0 0.0 9.6073 9.6073 96.666 0.0 0.0 0.0 18.010299956639813 16.40978057358332 16.40978057358332 13.06933472159166 0 1.7174165578762486 0.0 2.079689690656103 0.3807196863200844 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}GG{I|L};[{I|L}V]PH{I|L}{I|L}N{I|L};[{I|L}V]P{I|L}H{I|L}N{I|L};[{I|L}V]{I|L}PH{I|L}N{I|L};HP{I|L}V{I|L}{I|L}N{I|L};[{I|L}V]PH{I|L}{I|L}GG{I|L};[{I|L}P]HV{I|L}{I|L}N{I|L};[{I|L}V]P{I|L}{I|L}HN{I|L};[{I|L}P]VH{I|L}{I|L}N{I|L} 9.6073;8.1829;7.6444;6.9619;6.6338;6.5889;6.2201;6.1641;6.0874;6.0711 +;-;-;-;-;+;-;-;-;- + 1300 1 1.404 274821.3 1.0 13685 5814 19485 HBL1_DMSO_200M_050219_1,19501 HBL1_DMSO_200M_050219_1,19501,HPLVILNI True True HPLVILNI 93.775098 918.581469714642 607047494.0 19485.0 ENSG00000168090|ENST00000303904|COPS6;;ENST00000496358.1_1_7:99686670-99688376:+|nuORF;;ENST00000465027.1_1_7:99686595-99687052:+|nuORF 5.618465900421143 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19502 93.778 119.0 826640.0 25 0 120280.0 + -1 IGVRMELSL 9 135 517.2872885255881 1032.560024117976 2 518.2967407107353 MULTI CID FTMS 0 0 0 19485 314150.4375 0.3223477198695502 10 -1.0421600341796875 17 Oxidation (M) _IGVRM(Oxidation (M))ELSL_ REV__ENST00000487582.1_2_12:56226726-56226987:+|nuORF 19.438996006549623 0.310492472477042 3 {I|L}S{I|L}WWS{I|L} 7 -1 22.941 0.0 0.0 2.2217 0.0 0.0 129.07096269395112 0.0 129.07096269395112 0.0 9.34962890482408 0.0 0.0 0 0.0 0.0 0.5941876774005248 0.0 {I|L}S{I|L}WWS{I|L} 2.2217 - 550 + 1 1.404 79029.4 1.0 13686 5814 19485 HBL1_DMSO_200M_050219_1,19502 HBL1_DMSO_200M_050219_1,19502,IGVRMELSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19503 93.782 220.0 563490.0 25 0 58846.0 + 36197 SVVSQFITV 9 135 490.2769703652499 978.5393877972998 2 490.2769042849541 MULTI CID FTMS 0 0 0 19485 308932.75 1.0 0 0.0 18 Unmodified _SVVSQFITV_ ENSG00000100592|ENST00000360909|DAAM1;nc|ENSG00000100592|Q9Y4D1|DAAM1 37.97399986684836 0.0865783450051559 3 [VS]Q 3 6 24.041 0.0 0.0 2.4568 0.0 0.0 0.0 661.3566919390227 661.3566919390227 1.0653741265442562 0.0 0.0 0.0 0 0.0 2.0 0.2614393726401688 0.0 + [VS]Q 2.4568 + + 899 1 1.404 97735.5 1.0 13687 5814 19485 HBL1_DMSO_200M_050219_1,19503 HBL1_DMSO_200M_050219_1,19503,SVVSQFITV True True SVVSQFITV 93.781721 490.276904284954 2175638.75 19485.0 nc|ENSG00000100592|Q9Y4D1|DAAM1;;ENSG00000100592|ENST00000360909|DAAM1 2.467940886815389 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19504 93.794 682.0 453480.0 25 0 89430.0 + 10201 FQIEDVIHKF 10 161 425.8958073079901 1274.6655925241705 3 425.8960143923759 MULTI CID FTMS 0 0 0 19485 302673.28125 0.7080733585593576 -3 0.3137130737304687 19 Unmodified _FQIEDVIHKF_ chr14:55148473-55148594|47|21.74|0.62|5.14|-|ENST00000395425|DLGAP5,DLGAP5;chr14:55148684-55150799|48|24.25|0.53|5.5|-|ENST00000395425|DLGAP5,DLGAP5;ENSG00000126787|ENST00000247191|DLGAP5;nc|ENSG00000126787|Q15398-1|DLGAP5;nc|ENSG00000126787|Q15398-3|DLGAP5 71.70789743142352 0.0188816056000227 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EDV{I|L}HK{M(Oxidation (M))|F} 10 0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} + + 69.831 12.281 4.4636 5.4784 5.4784 57.314 0.0 0.0 0.0 0.0 21.540237445912425 0.0 0.0 0 1.4604093769761874 0.0 0.7742275032520141 0.5649093276264391 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EDV{I|L}HK{M(Oxidation (M))|F} 5.4784 + + 4650 + 1 1.404 253565.8 1.0 13688 5814 19485 HBL1_DMSO_200M_050219_1,19504 HBL1_DMSO_200M_050219_1,19504,FQIEDVIHKF True True FQIEDVIHKF 93.793565 425.896014392376 7584598.0 19485.0 nc|ENSG00000126787|Q15398-1|DLGAP5;;ENSG00000126787|ENST00000247191|DLGAP5;;chr14:55148684-55150799|48|24.25|0.53|5.5|-|ENST00000395425|DLGAP5,DLGAP5;;nc|ENSG00000126787|Q15398-3|DLGAP5;;chr14:55148473-55148594|47|21.74|0.62|5.14|-|ENST00000395425|DLGAP5,DLGAP5 7.604653835296631 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19505 93.806 740.0 370110.0 25 0 57840.0 + 1878 ALVSSLHLL 9 172 476.79442524077297 951.574297548346 2 476.7953369021416 MULTI CID FTMS 0 0 0 19485 218052.84375 0.9983889569685748 -1 0.14508056640625 20 Unmodified _ALVSSLHLL_ ENSG00000181789|ENST00000314797|COPG1 44.40701690623563 0.0526327925666318 3 [{I|L}A]VSS{I|L}H{I|L}{I|L} 9 0 + 52.323 0.0 0.0 5.4986 5.4986 86.885 0.0 0.0 0.0 27.976926167695368 9.02118255286132 9.02118255286132 9.45046257204389 0 0.75 2.0 0.2614393726401688 0.0 + + [{I|L}A]VSS{I|L}H{I|L}{I|L};[{I|L}A]V{[WT]|[RM]}H{I|L}{I|L};[{I|L}A]V[Q{I|L}]GVGPV;[{I|L}A]V[Q{I|L}]RGPV;[{I|L}A]V[{I|L}A]NVGPV;[{I|L}A]V[{I|L}A]GGVGPV;[{I|L}A]V[{I|L}A]GRGPV;[{I|L}A]V[Q{I|L}]G[{I|L}A][PA];[{I|L}A]V[Q{I|L}][Q{I|L}][PA];[{I|L}A]V[{I|L}A]N[{I|L}A][PA] 5.4986;4.5054;3.0633;3.0069;2.993;2.8663;2.8052;2.4083;2.3519;2.338 +;-;-;-;-;-;-;-;-;- + 3341 + 1 1.404 206785.0 1.0 13689 5814 19485 HBL1_DMSO_200M_050219_1,19505 HBL1_DMSO_200M_050219_1,19505,ALVSSLHLL True True ALVSSLHLL 93.806375 476.795336902142 1953751.125 19485.0 ENSG00000181789|ENST00000314797|COPG1 3.849326252937317 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19507 93.811 26.0 2342300.0 25 0 331450.0 + 4525 DAYLVHLI 8 77 472.2659550372491 942.5173571412982 2 472.2661010622978 MULTI CID FTMS 0 0 0 19506 1806156.125 0.3709701180234095 2 -0.113616943359375 1 Unmodified _DAYLVHLI_ ENSG00000105671|ENST00000247003|DDX49;ENST00000595858.5_1_19:19032475-19037138:+|nuORF;ENST00000601803.5_1_19:19032987-19035509:+|nuORF;nc|ENSG00000105671|Q9Y6V7-2|DDX49 36.46614268402704 0.2934124525509074 3 {[DA]|[EG]}Y{I|L}VH{I|L}{I|L} 8 0 + 52.688 0.0 0.0 5.5902 5.5902 90.588 0.0 0.0 0.0 19.5006419075002 6.753282428895275 6.753282428895275 52.68822953374432 0 0.805462187404089 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}Y{I|L}VH{I|L}{I|L} 5.5902 + + 100 + 1 1.404 53674.7 1.0 13690 5815 19506 HBL1_DMSO_200M_050219_1,19507 HBL1_DMSO_200M_050219_1,19507,DAYLVHLI False True DAYLVHLI 93.81054 472.266101062298 117391716.0 19506.0 ENST00000595858.5_1_19:19032475-19037138:+|nuORF;;nc|ENSG00000105671|Q9Y6V7-2|DDX49;;ENST00000601803.5_1_19:19032987-19035509:+|nuORF;;ENSG00000105671|ENST00000247003|DDX49 6.032856623331706 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19508 93.812 6.7 8202300.0 25 0 1854800.0 + 13589 HPLVILNI 8 67 459.7920439438144 917.5695349544288 2 459.7922241091728 MULTI CID FTMS 0 0 0 19506 7378579.0 0.3981631216129381 -2 0.2137985229492187 2 Unmodified _HPLVILNI_ ENSG00000168090|ENST00000303904|COPS6;ENST00000465027.1_1_7:99686595-99687052:+|nuORF;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 38.99230528602208 0.2511498934509823 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L} 8 0 + 53.734 0.0 0.0 5.8561 5.8561 90.389 0.0 0.0 0.0 20.586130075101785 33.913187455970544 20.586130075101785 22.12984366136141 0 0.6989700043360187 0.0 1.610924374808178 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L};[{I|L}P]VH{I|L}{I|L}N{I|L};[{I|L}P]HV{I|L}{I|L}N{I|L};[{I|L}P]V{I|L}H{I|L}N{I|L} 5.8561;3.4443;3.2524;3.1162 +;-;-;- + 84 1 1.404 47988.4 1.0 13691 5815 19506 HBL1_DMSO_200M_050219_1,19508 HBL1_DMSO_200M_050219_1,19508,HPLVILNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19509 93.813 20.0 2781800.0 25 0 410390.0 + 13428 HLPIDSLYL 9 69 535.7982164087542 1069.5818798843084 2 535.7980834841728 MULTI CID FTMS 0 0 0 19506 2582381.25 0.6204042254533709 -3 0.2946090698242187 3 Unmodified _HLPIDSLYL_ REV__ENSG00000061918|ENST00000264424|GUCY1B1;REV__nc|ENSG00000061918|Q02153-2|GUCY1B1;REV__nc|ENSG00000061918|Q02153-3|GUCY1B1 32.116972079565 0.1225432171549407 3 [VP]D{I|L}HT{I|L}Y{I|L} 9 -1 + 35.028 0.0 0.0 3.2749 3.2749 67.694 0.0 0.0 0.0 3.0102999566398125 7.077570906191902 3.0102999566398125 0.2422750325201406 0 0.5682503180159344 0.0 0.8252574989159953 0.0 [VP]D{I|L}HT{I|L}Y{I|L};[VP]D{I|L}H{I|L}TY{I|L};[DP]V{I|L}HT{I|L}Y{I|L};[DP]V{I|L}H{I|L}TY{I|L};[VP]D{I|L}TH{I|L}Y{I|L};[H{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{I|L}Y{I|L};[DP]V{I|L}TH{I|L}Y{I|L};[EP]VVHT{I|L}Y{I|L};[EP]VVH{I|L}TY{I|L};[VP]{[TV]|[{I|L}S]}EH{I|L}Y{I|L} 3.2749;3.2522;2.9934;2.9708;2.8288;2.7848;2.5474;1.8939;1.8712;1.5218 -;-;-;-;-;-;-;-;-;- 244 1 1.404 52872.6 1.0 13692 5815 19506 HBL1_DMSO_200M_050219_1,19509 HBL1_DMSO_200M_050219_1,19509,HLPIDSLYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19510 93.814 56.0 878470.0 25 0 57215.0 -1 0 53 1029.9765094087563 2057.938465884313 2 1030.478808581829 MULTI CID FTMS 0 0 0 19506 1244724.625 0.6527957738773706 -2 0.2137985229492187 4 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES{M(Oxidation (M))|F}GD{I|L}ST[DP]{[VA]|[{I|L}G]}MGN[KP] 19 -1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES{M(Oxidation (M))|F} + + 55.684 22.932 3.4889 2.7058 2.7058 49.665 0.0 0.0 0.0 0.0 32.75199162882615 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.3807196863200844 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES{M(Oxidation (M))|F}GD{I|L}ST[DP]{[VA]|[{I|L}G]}MGN[KP] 2.7058 - 137 + 1 1.404 40341.5 1.0 13693 5815 19506 HBL1_DMSO_200M_050219_1,19510 HBL1_DMSO_200M_050219_1,19510, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19511 93.816 33.0 2049000.0 25 0 291980.0 + 43944 YGLPVVVKL 9 84 494.31518021225 986.6158074913 2 494.3156921267509 MULTI CID FTMS 0 0 0 19506 1214763.0 0.1070758508483516 -3 0.2946090698242187 5 Unmodified _YGLPVVVKL_ ENSG00000168036|ENST00000349496|CTNNB1 39.957323273325 0.0756908302845263 3 YG{I|L}PVVVK{I|L} 9 0 + 56.027 0.0 0.0 5.6787 5.6787 88.352 0.0 0.0 0.0 4.634475811582632 10.959924024478129 4.634475811582632 12.56610855875568 0 0.718765315847925 1.154901959985743 0.0 0.0 + + YG{I|L}PVVVK{I|L};YG{I|L}PVV[K{I|L}]V 5.6787;4.405 +;- + 109 + 1 1.404 57179.0 1.0 13694 5815 19506 HBL1_DMSO_200M_050219_1,19511 HBL1_DMSO_200M_050219_1,19511,YGLPVVVKL True True YGLPVVVKL 93.815535 494.315692126751 162312352.0 19506.0 ENSG00000168036|ENST00000349496|CTNNB1 7.054086049397786 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19512 93.817 62.0 1048700.0 25 0 241740.0 + 4928 DGLTVHLVI 9 92 483.7845946902921 965.5546364473844 2 483.7848388552666 MULTI CID FTMS 0 0 0 19506 554884.4375 0.2030599409576325 -3 0.2946090698242187 6 Unmodified _DGLTVHLVI_ ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000175520|ENST00000311659|UBQLN3;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000472638.1_1_1:156020124-156021603:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;nc|ENSG00000160803|Q9NRR5-2|UBQLN4 67.34385681178166 0.0221257235307089 3 [H{I|L}]S{I|L}[DG]{I|L}V{I|L} 9 6 + 53.935 0.0 0.0 5.5859 5.5859 76.869 0.0 0.0 0.0 6.396044797224775 2.4152153434486223 2.4152153434486223 1.5051499783199065 0 0.6435078169319297 1.0969100130080565 1.0387254899964358 0.0 [H{I|L}]S{I|L}[DG]{I|L}V{I|L};[H{I|L}]S{I|L}V{[DA]|[EG]}V{I|L};[H{I|L}]VT[DG]{I|L}V{I|L};[DG]{I|L}TVH{I|L}V{I|L};[H{I|L}]VTV{[DA]|[EG]}V{I|L};[H{I|L}]S{I|L}{I|L}[DG]V{I|L};[H{I|L}]ST[PS]{I|L}V{I|L};[H{I|L}]VT{I|L}[DG]V{I|L};[H{I|L}]VVT{[DA]|[EG]}V{I|L};[HV]T{I|L}[DG]{I|L}V{I|L} 5.5859;5.4301;4.9752;4.9235;4.8193;4.6519;4.5074;4.0411;3.944;3.726 -;-;-;+;-;-;-;-;-;- + 663 1 1.404 53050.9 1.0 13695 5815 19506 HBL1_DMSO_200M_050219_1,19512 HBL1_DMSO_200M_050219_1,19512,DGLTVHLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19513 93.82 134.0 672260.0 25 0 75704.0 + 19421 LETYWTSL 8 124 506.7524168142181 1011.4902806952364 2 506.7530395388603 MULTI CID FTMS 0 0 0 19506 572170.125 0.9409158827518458 -2 0.2137985229492187 7 Unmodified _LETYWTSL_ REV__ENSG00000079974|ENST00000691320|RABL2B;REV__ENSG00000144134|ENST00000683472|RABL2A;REV__ENST00000464678.5_1_22:51208306-51220722:-|nuORF;REV__ENST00000477218.1_1_2:114392665-114398608:+|nuORF;REV__ENST00000494909.5_1_2:114398284-114398608:+|nuORF;REV__nc|ENSG00000144134|Q9UBK7-3|RABL2A;REV__nc|ENSG00000144134|Q9UBK7|RABL2A;REV__nc|ENSG00000144134|Q9UNT1-3|RABL2B;REV__nc|ENSG00000144134|Q9UNT1|RABL2B 23.1484247019978 0.5573009939494978 3 {I|L}E{I|L}{I|L}KKV 7 -1 41.274 0.0 0.0 4.0805 0.0 0.0 169.9247852029418 0.0 169.9247852029418 0.0 14.618354321449086 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}E{I|L}{I|L}KKV 4.0805 - 340 + 1 1.404 72806.8 1.0 13696 5815 19506 HBL1_DMSO_200M_050219_1,19513 HBL1_DMSO_200M_050219_1,19513,LETYWTSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19514 93.824 199.0 833670.0 25 0 98938.0 + 3944 DALLIIPKV 9 127 491.3209206809007 980.6272884286012 2 491.3210632205009 MULTI CID FTMS 0 0 0 19506 531907.625 0.1410855701291197 -3 0.2946090698242187 8 Unmodified _DALLIIPKV_ ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000492618.5_1_7:56127237-56129562:+|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A 56.17704186161178 0.0281986971544335 3 {[DA]|[EG]}{I|L}{I|L}{I|L}{I|L}PKV 9 0 + 72.093 0.0 0.0 7.3517 7.3517 92.857 0.0 0.0 0.0 52.68314508765954 8.164952322970024 8.164952322970024 10.329953270138615 0 1.6989700043360187 1.6989700043360187 0.0 0.2742275032520141 + + {[DA]|[EG]}{I|L}{I|L}{I|L}{I|L}PKV;{[DA]|[EG]}{I|L}{I|L}{I|L}{I|L}V[KP];{[DA]|[EG]}{I|L}{I|L}{I|L}{I|L}KPV;{[DA]|[EG]}{I|L}{I|L}{I|L}[KP]V{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}[KP]{I|L}V 7.3517;6.2983;6.2605;5.7739;5.2191 +;-;-;-;- + 618 + 1 1.404 127581.9 1.0 13697 5815 19506 HBL1_DMSO_200M_050219_1,19514 HBL1_DMSO_200M_050219_1,19514,DALLIIPKV True True DALLIIPKV 93.823565 491.321063220501 31702254.0 19506.0 nc|ENSG00000132141|Q92526-3|CCT6B;;ENSG00000146731|ENST00000275603|CCT6A;;ENSG00000132141|ENST00000314144|CCT6B;;CCT6A|p.N454K|1|0.24|ENSG00000146731|chr7:56061761-56061761|C/G|missense_variant;;ENST00000492618.5_1_7:56127237-56129562:+|nuORF;;nc|ENSG00000132141|Q92526-2|CCT6B;;nc|ENSG00000146731|P40227-2|CCT6A 4.76103671391805 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19515 93.827 150.0 506930.0 25 0 69665.0 + 863 AEVDVNQKLLL 11 102 621.3578322744459 1240.7011116156916 2 621.3588134646416 MULTI CID FTMS 0 0 0 19506 514320.875 0.0045342249739806 17 -1.923828125 9 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 34.93206674587334 0.2904649469012649 3 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L} 12 -1 + 83.604 0.0 0.0 6.7384 6.7384 80.993 0.0 0.0 0.0 8.45098040014257 7.447274948966935 7.447274948966935 1.7609125905568137 0 2.305462187404089 1.6989700043360187 0.6549471895720985 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}E{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}W{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DAV{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}E{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DAV{I|L}E{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}E{I|L}G{I|L}{I|L} 6.7384;6.5965;6.5259;6.2832;6.0573;5.9921;5.9921;5.9154;5.8502;5.8502 -;-;-;-;-;-;-;-;-;- 6668 1 1.404 61442.5 1.0 13698 5815 19506 HBL1_DMSO_200M_050219_1,19515 HBL1_DMSO_200M_050219_1,19515,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19516 93.834 445.0 394130.0 25 0 36135.0 + 37471 TLFEDSFQQI 10 167 614.2987096193699 1226.5828663055397 2 614.2994262576103 MULTI CID FTMS 0 0 0 19506 480613.59375 0.5995215797807524 -3 0.2946090698242187 10 Unmodified _TLFEDSFQQI_ ENSG00000078747|ENST00000374864|ITCH;ENSG00000123124|ENST00000517970|WWP1;ENSG00000198373|ENST00000359154|WWP2;ENST00000466609.1_1_3:98377983-98378526:+|nuORF;ENST00000483727.5_1_20:33033173-33065666:+|nuORF;ENST00000518683.5_1_8:87410815-87460532:+|nuORF;nc|ENSG00000123124|Q9H0M0-3|WWP1;nc|ENSG00000123124|Q9H0M0-6|WWP1;nc|ENSG00000198373|O00308-2|WWP2;nc|ENSG00000198373|O00308-3|WWP2;nc|ENSG00000289720|Q96J02-3|ITCH;nc|ENSG00000289720|Q96J02|ITCH 58.6788170122104 0.0400518768368984 3 [{I|L}T]CD{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 7 6 36.819 0.0 0.0 3.0017 0.0 0.0 0.0 384.1853192686835 384.1853192686835 4.255703113929393 0.0 0.0 0.0 0 0.2396518287104437 2.0 1.4559771852360797 0.0 [{I|L}T]CD{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 3.0017 - 3595 1 1.404 132623.5 1.0 13699 5815 19506 HBL1_DMSO_200M_050219_1,19516 HBL1_DMSO_200M_050219_1,19516,TLFEDSFQQI True True TLFEDSFQQI 93.834481 614.29942625761 7931898.0 19506.0 ENST00000518683.5_1_8:87410815-87460532:+|nuORF;;nc|ENSG00000123124|Q9H0M0-6|WWP1;;ENST00000466609.1_1_3:98377983-98378526:+|nuORF;;ENSG00000078747|ENST00000374864|ITCH;;nc|ENSG00000123124|Q9H0M0-3|WWP1;;nc|ENSG00000198373|O00308-2|WWP2;;nc|ENSG00000289720|Q96J02-3|ITCH;;ENST00000483727.5_1_20:33033173-33065666:+|nuORF;;ENSG00000123124|ENST00000517970|WWP1;;nc|ENSG00000198373|O00308-3|WWP2;;ENSG00000198373|ENST00000359154|WWP2;;nc|ENSG00000289720|Q96J02|ITCH 6.250491937001546 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19517 93.839 246.0 357250.0 25 0 59549.0 + 21787 LPNGGFITI 9 106 466.2662671544567 930.5179813757136 2 466.2659179568291 MULTI CID FTMS 0 0 0 19506 417911.40625 0.8748540428741881 1 -0.0917205810546875 11 Unmodified _LPNGGFITI_ ENST00000368865.8_1_10:124923375-124923471:+|nuORF 39.957323273325 0.0756908302845263 3 {[SA]|[TG]}[WQ]{I|L}{I|L}T{I|L} 8 6 + 50.155 0.0 0.0 5.3901 5.3901 74.252 0.0 0.0 0.0 0.399120845791181 14.317745016482434 0.399120845791181 0.399120845791181 0 0.9247425010840048 0.0 0.5 1.305462187404089 {[SA]|[TG]}[WQ]{I|L}{I|L}T{I|L};[NP]N{M(Oxidation (M))|F}{I|L}{I|L}T{I|L};[{I|L}T]{I|L}EE{I|L}T{I|L};{[DA]|[EG]}R[KS]{I|L}E{I|L};[{I|L}T]EE{I|L}{I|L}T{I|L};[NP]GG{M(Oxidation (M))|F}{I|L}{I|L}T{I|L};{[SA]|[TG]}[WQ]{I|L}T{I|L}{I|L};[NP]N{M(Oxidation (M))|F}{I|L}T{I|L}{I|L};[{I|L}T]{I|L}EET{I|L}{I|L};[{I|L}P]{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}T{I|L} 5.3901;5.3472;5.3112;5.2605;5.1749;5.1351;5.042;4.9991;4.9631;4.9591 -;-;-;-;-;-;-;-;-;- 768 1 1.404 73572.2 1.0 13700 5815 19506 HBL1_DMSO_200M_050219_1,19517 HBL1_DMSO_200M_050219_1,19517,LPNGGFITI True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19518 93.842 144.0 1108800.0 25 0 108710.0 + 34116 SLLQTLYKV 9 166 532.8211403360659 1063.6277277389318 2 532.8218261599541 MULTI CID FTMS 0 0 0 19506 409253.46875 0.4812462540757309 -2 0.2137985229492187 12 Unmodified _SLLQTLYKV_ ENSG00000100401|ENST00000356244|RANGAP1 62.57269311338072 0.0246576765497938 3 {[TV]|[{I|L}S]}{I|L}QT{I|L}YKV 9 0 + 82.916 0.0 0.0 7.7956 7.7956 92.783 0.0 0.0 0.0 38.6204197805295 12.587418566968154 12.587418566968154 9.208187539523747 0 0.75 2.0 0.7614393726401688 0.6989700043360187 + + {[TV]|[{I|L}S]}{I|L}QT{I|L}YKV;{[TV]|[{I|L}S]}{I|L}[AG]T{I|L}YKV;{[TV]|[{I|L}S]}AA{I|L}YKVTV;{[TV]|[{I|L}S]}AAY{I|L}KVTV;{[TV]|[{I|L}S]}{I|L}AAYKVTV;[Q{I|L}]T{I|L}YKVTV;[Q{I|L}]TY{I|L}KVTV;[{I|L}T]Q{I|L}YKVTV;[QT]{I|L}{I|L}YKVTV;[{I|L}T]QY{I|L}KVTV 7.7956;6.9299;4.2494;3.9761;3.7908;2.5777;2.3045;2.1787;2.0744;1.9054 +;-;-;-;-;-;-;-;-;- + 3485 + 1 1.404 125606.4 1.0 13701 5815 19506 HBL1_DMSO_200M_050219_1,19518 HBL1_DMSO_200M_050219_1,19518,SLLQTLYKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19519 93.847 247.0 543550.0 25 0 48913.0 + 19535 LFPMPRVIY 9 125 568.3206792616899 1134.6268055901796 2 568.3197509646416 MULTI CID FTMS 0 0 0 19506 346625.34375 0.65759046098753 3 -0.3005599975585937 13 Unmodified _LFPMPRVIY_ ENSG00000013293|ENST00000231706|SLC7A14 16.942295170755138 0.3780752226737986 3 MP{[QN]|[E{I|L}]|[KN]} 4 6 16.682 0.0 0.0 1.4703 0.0 0.0 646.3814748804738 0.0 646.3814748804738 0.0 0.4845500650402812 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 MP{[QN]|[E{I|L}]|[KN]} 1.4703 - 605 1 1.404 107212.5 1.0 13702 5815 19506 HBL1_DMSO_200M_050219_1,19519 HBL1_DMSO_200M_050219_1,19519,LFPMPRVIY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19520 93.854 433.0 308730.0 25 0 9906.1 33457 SIFGSLDGV 9 108 894.45609389601 893.4488174294099 1 894.4576904177666 MULTI CID FTMS 0 0 0 19506 330031.46875 0.8234223064416983 1 -0.0917205810546875 14 Unmodified _SIFGSLDGV_ ENSG00000136699|ENST00000680298|SMPD4;ENST00000415574.6_1_2:132250659-132263934:+|nuORF;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4 85.27202061508552 0.0162393975915471 3 {NN|[MP]|[D{I|L}]|[EV]}TAS{I|L}{M(Oxidation (M))|F}GA 9 5 + 77.292 0.0 0.0 8.6509 8.6509 90.566 0.0 0.0 0.0 5.969100130080562 6.720449851406514 5.969100130080562 5.969100130080562 0 0.9604093769761876 2.0 2.2104093769761874 0.0 {NN|[MP]|[D{I|L}]|[EV]}TAS{I|L}{M(Oxidation (M))|F}GA;{[TV]|[{I|L}S]}EAS{I|L}{M(Oxidation (M))|F}GA;{[TV]|[{I|L}S]}AES{I|L}{M(Oxidation (M))|F}GA;{NN|[MP]|[D{I|L}]|[EV]}TAS{M(Oxidation (M))|F}{I|L}GA;{[QN]|[E{I|L}]|[KN]}SAS{I|L}{M(Oxidation (M))|F}GA;{[TV]|[{I|L}S]}EAS{M(Oxidation (M))|F}{I|L}GA;{[TV]|[{I|L}S]}AES{M(Oxidation (M))|F}{I|L}GA;{[QN]|[E{I|L}]|[KN]}ASS{I|L}{M(Oxidation (M))|F}GA;{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{M(Oxidation (M))|F}GA;{NN|[MP]|[D{I|L}]|[EV]}S[TA]{I|L}{M(Oxidation (M))|F}GA 8.6509;7.9828;7.7366;7.405;6.8892;6.7369;6.4907;6.3631;6.3419;5.8591 -;-;-;-;-;-;-;-;-;- 2112 1 1.404 91538.0 1.0 13703 5815 19506 HBL1_DMSO_200M_050219_1,19520 HBL1_DMSO_200M_050219_1,19520,SIFGSLDGV True True SAIESLFGA 93.854319 894.457690417767 3112208.0 19506.0 nc|ENSG00000050438|Q2Y0W8-5|SLC4A8;;nc|ENSG00000033867|Q9Y6M7-2|SLC4A7;;ENSG00000144290|ENST00000446997|SLC4A10;;nc|ENSG00000050438|Q2Y0W8-7|SLC4A8;;ENSG00000050438|ENST00000453097|SLC4A8;;nc|ENSG00000033867|Q9Y6M7-4|SLC4A7;;nc|ENSG00000033867|Q9Y6M7-12|SLC4A7;;nc|ENSG00000033867|Q9Y6M7|SLC4A7;;nc|ENSG00000050438|Q2Y0W8-2|SLC4A8;;ENST00000319957.10_1_12:51818771-51890959:+|nuORF;;nc|ENSG00000033867|Q9Y6M7-8|SLC4A7;;nc|ENSG00000050438|Q2Y0W8-8|SLC4A8;;ENST00000446228.5_1_2:162758621-162834241:+|nuORF;;nc|ENSG00000144290|Q6U841-2|SLC4A10;;nc|ENSG00000033867|Q9Y6M7-5|SLC4A7;;nc|ENSG00000033867|Q9Y6M7-9|SLC4A7;;nc|ENSG00000050438|Q2Y0W8-4|SLC4A8;;nc|ENSG00000144290|Q6U841-3|SLC4A10;;ENST00000546663.1_1_12:51863410-51865314:+|nuORF;;nc|ENSG00000050438|Q2Y0W8-3|SLC4A8;;nc|ENSG00000033867|Q9Y6M7-3|SLC4A7;;nc|ENSG00000033867|Q9Y6M7-6|SLC4A7;;nc|ENSG00000050438|Q2Y0W8-6|SLC4A8;;ENSG00000033867|ENST00000454389|SLC4A7;;nc|ENSG00000033867|Q9Y6M7-13|SLC4A7 5.148237228393555 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19521 93.859 241.0 742050.0 25 0 63700.0 + 4134 DAPFVINAI 9 144 480.263365298556 958.512177663912 2 480.2644836306572 MULTI CID FTMS 0 0 0 19506 332401.125 0.5453537573694646 -2 0.2137985229492187 15 Unmodified _DAPFVINAI_ ENSG00000205084|ENST00000258173|TMEM231;ENST00000564318.1_1_16:75573894-75575375:-|nuORF;nc|ENSG00000205084|Q9H6L2-2|TMEM231;nc|ENSG00000205084|Q9H6L2-3|TMEM231 48.345845343767074 0.0439967357579942 3 {[DA]|[EG]}{M(Oxidation (M))|F}Q{I|L}[RP]{I|L} 8 4 + 39.078 0.0 0.0 4.077 4.077 82.003 0.0 0.0 0.0 -2.0990093236770946 8.27623146104628 -2.0990093236770946 9.262137858390812 0 0.0 1.6989700043360187 0.0 0.3494850021680094 {[DA]|[EG]}{M(Oxidation (M))|F}Q{I|L}[RP]{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}[AG]{I|L}[RP]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}[RP]{[QC]|[C(Carbamidomethyl (C))A]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V[RP]{I|L}{[QC]|[C(Carbamidomethyl (C))A]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VA[VP]V{[QC]|[C(Carbamidomethyl (C))A]};[{I|L}V]M{I|L}[RP]{[QC]|[C(Carbamidomethyl (C))A]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PA]{I|L}A{I|L}{[QC]|[C(Carbamidomethyl (C))A]};[VP]{M(Oxidation (M))|F}{I|L}[RP]{[QC]|[C(Carbamidomethyl (C))A]};[{I|L}V]M[RP]{I|L}{[QC]|[C(Carbamidomethyl (C))A]};{[SA]|[TG]}[KG]{I|L}[RP]{[QC]|[C(Carbamidomethyl (C))A]} 4.077;3.1107;2.882;2.2539;1.8331;1.3722;1.2363;1.0746;0.74411;0.69744 -;-;-;-;-;-;-;-;-;- 742 + 1 1.404 137961.1 1.0 13704 5815 19506 HBL1_DMSO_200M_050219_1,19521 HBL1_DMSO_200M_050219_1,19521,DAPFVINAI True True DAPFVINAI 93.858812 480.264483630657 11342022.0 19506.0 ENSG00000205084|ENST00000258173|TMEM231;;nc|ENSG00000205084|Q9H6L2-3|TMEM231;;nc|ENSG00000205084|Q9H6L2-2|TMEM231;;ENST00000564318.1_1_16:75573894-75575375:-|nuORF -0.0141595701376597 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19522 93.866 385.0 448870.0 25 0 166080.0 -1 0 104 1086.860761466092 3257.5604549984764 3 1087.197192370892 MULTI CID FTMS 0 0 0 19506 305513.34375 0.5592334237662452 2 -0.113616943359375 16 3 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H[K{I|L}] 9 -1 34.675 0.0 0.0 1.0645 0.0 0.0 2170.971677710425 0.0 2170.971677710425 0.0 0.2507663609921522 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H[K{I|L}] 1.0645 - 666 + 1 1.404 116275.4 1.0 13705 5815 19506 HBL1_DMSO_200M_050219_1,19522 HBL1_DMSO_200M_050219_1,19522, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19523 93.869 110.0 491040.0 25 0 52596.0 + 10567 FVIDLQTRL 9 75 552.8240295520234 1103.6335061708469 2 552.8245117068291 MULTI CID FTMS 0 0 0 19506 261973.6875 0.1387836024478164 3 -0.3005599975585937 17 Unmodified _FVIDLQTRL_ ENSG00000131051|ENST00000253363|RBM39;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;nc|ENSG00000131051|Q14498-3|RBM39 23.78978130925829 0.2284941198415988 3 V{[VA]|[{I|L}G]}Q{I|L}D{I|L}VE 9 7 51.872 0.0 0.0 4.7001 0.0 0.0 119.07406813789218 0.0 119.07406813789218 0.0 38.773043837969325 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{[VA]|[{I|L}G]}Q{I|L}D{I|L}VE 4.7001 - 61 1 1.404 47905.9 1.0 13706 5815 19506 HBL1_DMSO_200M_050219_1,19523 HBL1_DMSO_200M_050219_1,19523,FVIDLQTRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19524 93.879 531.0 222430.0 25 0 20716.0 + 41035 VMHPFWNTI 9 164 572.7838500641418 1143.5531471950835 2 572.7839233279228 MULTI CID FTMS 0 0 0 19506 263430.21875 1.0 0 0.0 18 Unmodified _VMHPFWNTI_ ENSG00000138018|ENST00000260585|SELENOI;ENST00000260585.11_1_2:26569100-26611935:+|nuORF 32.116972079565 0.1225432171549407 3 {[QN]|[E{I|L}]|[KN]}STNHTET{I|L} 10 8 + 58.298 0.0 0.0 5.098 5.098 72.585 0.0 0.0 0.0 0.0033458769306591 10.012262311882765 0.0033458769306591 0.0033458769306591 0 1.079689690656103 1.6989700043360187 0.2887254899964357 0.0 {[QN]|[E{I|L}]|[KN]}STNHTET{I|L};[{I|L}T]DTNHTET{I|L};{[QN]|[E{I|L}]|[KN]}STNHMVT{I|L};[{I|L}T]DTNHMVT{I|L};{[QN]|[E{I|L}]|[KN]}STNTHET{I|L};[{I|L}T]DTNTHET{I|L};{[QN]|[E{I|L}]|[KN]}STHMVNT{I|L};[{I|L}T]DTHMVNT{I|L};{[QN]|[E{I|L}]|[KN]}STHNTET{I|L};[{I|L}T]DTHNTET{I|L} 5.098;5.0977;5.0133;5.013;4.7339;4.7336;4.3698;4.3695;4.359;4.3587 -;-;-;-;-;-;-;-;-;- 3594 1 1.404 94945.6 1.0 13707 5815 19506 HBL1_DMSO_200M_050219_1,19524 HBL1_DMSO_200M_050219_1,19524,VMHPFWNTI True True VMHPFWNTI 93.87861 572.783923327923 2503481.75 19506.0 ENSG00000138018|ENST00000260585|SELENOI;;ENST00000260585.11_1_2:26569100-26611935:+|nuORF 6.606362501780192 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19525 93.888 518.0 137950.0 25 0 9838.7 -1 0 96 1159.5388808536836 0 1159.210009753704 PEAK CID FTMS 0 0 0 19506 58202.58984375 0.4341208046354505 1 -0.0917205810546875 19 3 QY{M(Oxidation (M))|F}S 4 -1 17.167 0.0 0.0 0.74089 0.0 0.0 786.4067078278134 1002.3964327447874 1788.8031405726008 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QY{M(Oxidation (M))|F}S 0.74089 - 176 + 1 1.404 51240.2 1.0 13708 5815 19506 HBL1_DMSO_200M_050219_1,19525 HBL1_DMSO_200M_050219_1,19525, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19526 93.898 591.0 255770.0 25 0 25625.0 15047 ILYDTSSKKL 10 171 584.3342154473621 0 584.3340331912041 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _ILYDTSSKKL_ ENSG00000139350|ENST00000266742|NEDD1;nc|ENSG00000139350|Q8NHV4-2|NEDD1;nc|ENSG00000139350|Q8NHV4-3|NEDD1 24.020572477871973 0.2658879206942018 3 {M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK 7 8 16.865 0.0 0.0 1.4456 0.0 0.0 242.1450411468741 128.07222925357658 370.21727040045073 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.3054621874040891 0.8026048219588936 {M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK 1.4456 - 359 + 1 1.404 114678.0 1.0 13709 5815 19506 HBL1_DMSO_200M_050219_1,19526 HBL1_DMSO_200M_050219_1,19526,ILYDTSSKKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19528 93.902 7.2 1880300.0 25 0 194000.0 + 12097 GQIDLLERL 9 36 528.8060836147177 1055.5976142962354 2 528.8063232302666 MULTI CID FTMS 0 0 0 19527 1664865.75 0.3553071915706228 -1 0.0917205810546875 1 Unmodified _GQIDLLERL_ ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC 11.494710602746466 0.5255349189887087 3 {[QG]|[NA]}{I|L}D{I|L} 5 4 25.713 0.0 0.0 2.4359 0.0 0.0 0.0 526.3003634088499 526.3003634088499 25.71333751784365 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + {[QG]|[NA]}{I|L}D{I|L} 2.4359 + + 7 + 1 1.404 17788.5 1.0 13710 5816 19527 HBL1_DMSO_200M_050219_1,19528 HBL1_DMSO_200M_050219_1,19528,GQIDLLERL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19529 93.903 24.0 404830.0 25 0 66057.0 -1 VYLFMRCLL 9 26 607.8245097319684 1213.6344665307367 2 607.8245117068291 MULTI CID FTMS 0 0 0 19527 471259.125 0.2465588216155307 2 -0.2088394165039062 2 Carbamidomethyl (C) _VYLFMRC(Carbamidomethyl (C))LL_ ENST00000427755.2_1_11:33037501-33047701:+|nuORF 2.302733041254933 0.8342969208511092 3 {I|L} 1 -1 11.594 0.0 0.0 0.9553 0.0 0.0 1082.539280228782 0.0 1082.539280228782 0.0 9.119543704721591 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.9553 + + 3 + 1 1.404 14407.6 1.0 13711 5816 19527 HBL1_DMSO_200M_050219_1,19529 HBL1_DMSO_200M_050219_1,19529,VYLFMRCLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19530 93.905 46.0 341310.0 25 0 38873.0 39639 VDVLQLLQ 8 44 464.2792162609106 926.5438795886212 2 464.2794372439384 MULTI CID FTMS 0 0 0 19527 418945.0625 0.0800129761205386 -2 0.1604385375976562 3 Unmodified _VDVLQLLQ_ ENSG00000114654|ENST00000683648|EFCC1;ENST00000481536.2_1_3:128749483-128758688:+|nuORF;nc|ENSG00000114654|Q9HA90-2|EFCC1;nc|ENSG00000114654|Q9HA90|EFCC1 0.7936320650641473 0.8195151834710337 3 D 1 7 2.7642 0.0 0.0 0.29834 0.0 0.0 740.4430933110807 68.0512941949828 808.4943875060635 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.29834 + + 5 + 1 1.404 19176.1 1.0 13712 5816 19527 HBL1_DMSO_200M_050219_1,19530 HBL1_DMSO_200M_050219_1,19530,VDVLQLLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19531 93.907 91.0 426800.0 25 0 25899.0 + 41970 VQLPDGGWGL 10 81 521.2714248951427 1040.5282968570853 2 521.2714721560478 MULTI CID FTMS 0 0 0 19527 396462.28125 0.3705497813583343 2 -0.2088394165039062 4 Unmodified _VQLPDGGWGL_ ENSG00000160285|ENST00000397728|LSS;nc|ENSG00000160285|P48449-2|LSS 18.1463463914782 0.5430639438673815 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 7 18.952 0.0 0.0 1.8214 0.0 0.0 0.0 697.2936867338668 697.2936867338668 0.9936247538460954 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3494850021680094 + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 1.8214 + + 95 1 1.404 36536.6 1.0 13713 5816 19527 HBL1_DMSO_200M_050219_1,19531 HBL1_DMSO_200M_050219_1,19531,VQLPDGGWGL False True VQLPDGGWGL 93.906702 521.271472156048 18609218.0 19527.0 nc|ENSG00000160285|P48449-2|LSS;;ENSG00000160285|ENST00000397728|LSS 5.241891860961914 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19532 93.908 65.0 1007300.0 25 0 94761.0 + 4554 DAYQVLSTL 9 90 505.2638250157652 1008.5130970983304 2 505.2647582888603 MULTI CID FTMS 0 0 0 19527 170549.265625 0.0462339758632124 6 -0.6394882202148438 5 Unmodified _DAYQVLSTL_ ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2 39.94969957227396 0.0757326808254658 3 {I|L}[YR]{[DA]|[EG]}VC(Carbamidomethyl (C)){I|L} 8 7 + 36.911 0.0 0.0 3.66 3.66 51.635 0.0 0.0 0.0 14.51544993495972 7.742275032520141 7.742275032520141 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 {I|L}[YR]{[DA]|[EG]}VC(Carbamidomethyl (C)){I|L};{I|L}[YR]V{[DA]|[EG]}C(Carbamidomethyl (C)){I|L};{I|L}[YR]VQ[DC]{I|L};{I|L}[YR][DG]{I|L}C(Carbamidomethyl (C)){I|L};{I|L}[YR]VQ[EC]V;{I|L}[YR]V{[DA]|[EG]}MAA;{I|L}[YR]{[DA]|[EG]}VMAA;{I|L}[YR]W{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{I|L}[YR][DG]{I|L}MAA 3.66;3.66;3.3615;3.3615;2.1546;1.8195;1.8195;1.8175;1.521 -;-;-;-;-;-;-;-;- 184 + 1 1.404 55784.6 1.0 13714 5816 19527 HBL1_DMSO_200M_050219_1,19532 HBL1_DMSO_200M_050219_1,19532,DAYQVLSTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19533 93.918 556.0 414000.0 25 0 51738.0 + 40132 VGLPLPLT 8 139 809.5134060345256 808.5061295679255 1 812.5238525271416 MULTI CID FTMS 0 0 0 19527 116772.2421875 0.1931005015522612 16 -1.8321075439453125 6 Unmodified _VGLPLPLT_ REV__ENST00000525883.5_1_11:6587352-6591461:+|nuORF;REV__ENST00000533635.5_1_11:6587803-6591461:+|nuORF 14.581692164780916 0.6954967302934248 3 KGV{I|L}VN 6 -1 38.493 0.0 0.0 4.761 0.0 0.0 0.0 195.1141604059204 195.1141604059204 14.345945443749972 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 KGV{I|L}VN 4.761 - 5492 + 1 1.404 156329.8 1.0 13715 5816 19527 HBL1_DMSO_200M_050219_1,19533 HBL1_DMSO_200M_050219_1,19533,VGLPLPLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19534 93.92 86.0 858910.0 25 0 86089.0 10956 GALQMAEILM 10 123 538.7781890186475 1075.5418251040949 2 538.7760497927666 MULTI CID FTMS 0 0 0 19527 120991.2265625 0.4798956312448592 1 -0.0218963623046875 7 Unmodified _GALQMAEILM_ ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 15.847184025352805 0.5816416552707754 3 [{I|L}V]EPHMHT{I|L} 9 9 + 25.147 0.0 0.0 2.3381 2.3381 67.112 0.0 0.0 0.0 1.2418888241781223 1.4746079346973886 1.2418888241781223 0.7403126772771884 0 0.7064608101803795 1.6989700043360187 0.0 0.0 [{I|L}V]EPHMHT{I|L};[{I|L}V]EPEE{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}VPEE{M(Oxidation (M))|F}T{I|L};[YV]{[WT]|[RM]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}VPHMHT{I|L};{[QN]|[E{I|L}]|[KN]}AYVMHT{I|L};{[QN]|[E{I|L}]|[KN]}PVEE{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}PHVMHT{I|L};[{I|L}V]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}MHT{I|L};{[QN]|[E{I|L}]|[KN]}PVHMHT{I|L} 2.3381;2.2692;2.0883;1.9017;1.8322;1.6424;1.5285;1.3625;1.3607;1.2724 -;-;-;-;-;-;-;-;-;- 464 1 1.404 63107.4 1.0 13716 5816 19527 HBL1_DMSO_200M_050219_1,19534 HBL1_DMSO_200M_050219_1,19534,GALQMAEILM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19536 93.935 760.0 888910.0 25 0 97200.0 + 20049 LIPTPPENI 9 220 497.2829929575642 992.5514329819284 2 497.2831298708916 MULTI CID FTMS 0 0 0 19535 468140.5 1.0 0 0.0 1 Unmodified _LIPTPPENI_ ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 43.85829265575387 0.0542763391141878 3 {I|L}{I|L}{I|L}E[YV]M{I|L} 8 6 + 68.938 0.0 0.0 6.9455 6.9455 80.713 0.0 0.0 0.0 27.36661839178112 7.469617958179242 7.469617958179242 1.249387366082999 0 0.75 1.6989700043360187 1.0114393726401687 0.0 {I|L}{I|L}{I|L}E[YV]M{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}M{I|L};{I|L}{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}M{I|L};{I|L}{I|L}{I|L}EM[YV]{I|L};{I|L}{I|L}{I|L}EM{I|L}YV;{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}P{I|L};{I|L}{I|L}{I|L}E[YV]P{M(Oxidation (M))|F};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}P{M(Oxidation (M))|F};{I|L}{I|L}{I|L}E[YV]{M(Oxidation (M))|F}P;{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{M(Oxidation (M))|F}P 6.9455;6.8197;6.339;6.2413;6.193;5.7705;5.5943;5.4684;5.3788;5.2529 -;-;-;-;-;-;-;-;-;- 3399 + 1 1.404 503776.2 1.0 13717 5817 19535 HBL1_DMSO_200M_050219_1,19536 HBL1_DMSO_200M_050219_1,19536,LIPTPPENI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19537 93.943 475.0 386310.0 25 0 30049.0 + 2363 AQLQDFDWQV 10 189 625.2963769178942 1248.5782009025884 2 625.2956420779228 MULTI CID FTMS 0 0 0 19535 330410.71875 0.6596937322954991 -1 0.0218963623046875 2 Unmodified _AQLQDFDWQV_ ENSG00000169019|ENST00000381571|COMMD8 70.33199760932243 0.018925923965799 3 [AG]A{I|L}QD{M(Oxidation (M))|F}DWQV 11 2 + 60.431 0.0 0.0 4.84 4.84 75.98 0.0 0.0 0.0 2.5768620196489422 3.67931555708239 2.5768620196489422 2.5768620196489422 0 0.7742275032520142 1.6989700043360187 0.0 1.3829131673969606 [AG]A{I|L}QD{M(Oxidation (M))|F}DWQV;[QA]{I|L}QD{M(Oxidation (M))|F}DWQV;[AG]{I|L}AQD{M(Oxidation (M))|F}DWQV;[AG]A{I|L}QD{M(Oxidation (M))|F}DH[Y{I|L}];[QA]{I|L}GAD{M(Oxidation (M))|F}DWQV;[QA]{I|L}QD{M(Oxidation (M))|F}DH[Y{I|L}];[AG]{I|L}AQD{M(Oxidation (M))|F}DH[Y{I|L}];[Q{I|L}]AQD{M(Oxidation (M))|F}DWQV;[QA]{I|L}GAD{M(Oxidation (M))|F}DH[Y{I|L}];[Q{I|L}]AGAD{M(Oxidation (M))|F}DWQV 4.84;4.6336;4.5989;4.5453;4.437;4.339;4.3042;4.226;4.1423;4.0293 -;+;-;-;-;-;-;-;-;- + 9837 1 1.404 142814.2 1.0 13718 5817 19535 HBL1_DMSO_200M_050219_1,19537 HBL1_DMSO_200M_050219_1,19537,AQLQDFDWQV True True AQLQDFDWQV 93.943478 625.295642077923 4356332.5 19535.0 ENSG00000169019|ENST00000381571|COMMD8 5.800285816192627 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19538 93.952 498.0 756440.0 25 0 56133.0 + -1 SNTQAERSIIGMID 14 155 788.88522915315 1575.7559053731 2 788.8854247927666 MULTI CID FTMS 0 0 0 19535 299253.71875 1.0 0 0.0 3 Carbamidomethyl (C) _WYIRQYC(Carbamidomethyl (C))FLID_ ENSG00000184330|ENST00000368729|S100A7A;ENSG00000143556|ENST00000368723|S100A7 2.9952420565917617 0.861016188266951 3 [{M(Oxidation (M))|F}V]MG{I|L}{I|L}SREAQYY 13 -1 + 55.562 0.0 0.0 3.5261 3.5261 68.141 0.0 0.0 0.0 0.1529453897051169 0.1529453897051169 0.1529453897051169 0.1529453897051169 0 2.2370768395504905 0.0 1.1861818737241734 0.3807196863200844 [{M(Oxidation (M))|F}V]MG{I|L}{I|L}SREAQYY;{[QD]|[EN]|[WG]|[KD]|[RS]}TQAERS{I|L}{I|L}GMNN;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}AC(Carbamidomethyl (C))[HT]GMNN;{NN|[MP]|[D{I|L}]|[EV]}WEERS{I|L}{I|L}GMNN;{[QD]|[EN]|[WG]|[KD]|[RS]}TQAWW{I|L}{I|L}GMNN;{[DA]|[EG]}GTQAERS{I|L}{I|L}GMNN;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}D[QT][HT]GMNN;[{I|L}P]VH{I|L}{I|L}AC(Carbamidomethyl (C))[HT]GMNN;[{I|L}P]V{I|L}{I|L}D{[CT]|[{M(Oxidation (M))|F}G]}{[CA]|SS}{I|L}GMNN;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}A[CG][HT]GMNN 3.5261;3.5164;3.3944;3.3247;3.1102;3.065;3.0628;2.9913;2.9224;2.8201 -;-;-;-;-;-;-;-;-;- 3306 + 1 1.404 258809.7 1.0 13719 5817 19535 HBL1_DMSO_200M_050219_1,19538 HBL1_DMSO_200M_050219_1,19538,WYIRQYCFLID False False SNTQAERSIIGMID 93.952301 788.885424792767 3500840.75 19535.0 ENSG00000184330|ENST00000368729|S100A7A;;ENSG00000143556|ENST00000368723|S100A7 8.850882530212402 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19539 93.961 508.0 345370.0 25 0 22073.0 + 16892 KIGPITPLEF 10 183 557.8296845352935 0 557.8299438357353 PEAK CID FTMS 0 0 0 19535 290290.03125 0.6341103071447578 -1 0.0218963623046875 4 Unmodified _KIGPITPLEF_ ENSG00000108578|ENST00000261714|BLMH;ENST00000579325.1_1_17:28601041-28612498:-|nuORF;ENST00000582669.1_1_17:28600488-28612498:-|nuORF 41.95555342248728 0.0932794664696581 3 E[{I|L}P]T 4 7 30.362 0.0 0.0 2.7263 0.0 0.0 165.07793996820777 505.3142489068969 670.3921888751047 0.0 0.0 0.0 0.0 0 1.4361818737241734 0.0 1.1307196863200843 0.0 E[{I|L}P]T 2.7263 - 317 + 1 1.404 136079.3 1.0 13720 5817 19535 HBL1_DMSO_200M_050219_1,19539 HBL1_DMSO_200M_050219_1,19539,KIGPITPLEF True True KIGPITPLEF 93.961262 557.829943835735 4443815.0 19535.0 ENST00000579325.1_1_17:28601041-28612498:-|nuORF;;ENSG00000108578|ENST00000261714|BLMH;;ENST00000582669.1_1_17:28600488-28612498:-|nuORF 5.789807319641113 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19540 93.971 541.0 121840.0 25 0 6116.1 -1 MLRRVYRRRRI 11 117 816.9913818240166 0 816.9913818240166 PEAK CID FTMS 0 0 0 -1 0 5 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))LRRVYRRRRI_ ENST00000261192.11_1_12:25054751-25054805:-|nuORF 0.0 0.4761840153648598 3 S{I|L}V 3 -1 16.209 0.0 0.0 0.99321 0.0 0.0 947.5843753854368 382.1735921439756 1329.7579675294126 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 S{I|L}V 0.99321 - 227 + 1 1.404 49998.6 1.0 13721 5817 19535 HBL1_DMSO_200M_050219_1,19540 HBL1_DMSO_200M_050219_1,19540,MLRRVYRRRRI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19541 93.98 543.0 185110.0 25 0 19453.0 + 10202 FQIEDVIHKF 10 134 638.3399002993557 1274.6652476655113 2 638.3405029177666 MULTI CID FTMS 0 0 0 19535 220762.265625 1.0 0 0.0 6 Unmodified _FQIEDVIHKF_ chr14:55148473-55148594|47|21.74|0.62|5.14|-|ENST00000395425|DLGAP5,DLGAP5;chr14:55148684-55150799|48|24.25|0.53|5.5|-|ENST00000395425|DLGAP5,DLGAP5;ENSG00000126787|ENST00000247191|DLGAP5;nc|ENSG00000126787|Q15398-1|DLGAP5;nc|ENSG00000126787|Q15398-3|DLGAP5 40.23920728925047 0.1550410903091231 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EDV{I|L}H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 10 0 + 58.623 0.0 0.0 4.5991 4.5991 71.391 0.0 0.0 0.0 0.2906776956850265 0.2906776956850265 0.2906776956850265 0.2906776956850265 0 0.7614393726401688 0.6777807052660807 0.2742275032520141 0.2614393726401688 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EDV{I|L}H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}VDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{I|L}P[YG]VDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[VP]PH{I|L}VDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{I|L}P[YR]DE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RH]Y{I|L}H{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{I|L}P]{I|L}[YG]VDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Y[RH]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{I|L}DDV[{I|L}A]{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KA][KC]{I|L}VDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.5991;4.5763;3.9278;3.7676;3.4119;2.8058;2.8048;2.7796;2.4326;2.3946 +;-;-;-;-;-;-;-;-;- + 1435 + 1 1.404 77579.4 1.0 13722 5817 19535 HBL1_DMSO_200M_050219_1,19541 HBL1_DMSO_200M_050219_1,19541,FQIEDVIHKF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19542 93.99 552.0 211590.0 25 0 10329.0 + 15222 IPFPNVKDLQV 11 145 635.3643119807252 1268.7140710282504 2 635.3635742068291 MULTI CID FTMS 0 0 0 19535 223862.546875 0.5982476898245552 -1 0.0218963623046875 7 Unmodified _IPFPNVKDLQV_ ENSG00000136492|ENST00000259008|BRIP1;nc|ENSG00000136492|Q9BX63-2|BRIP1 62.86856922530385 0.057503257068159 3 {I|L}P{M(Oxidation (M))|F}PNV 6 5 61.948 0.0 0.0 4.8828 0.0 0.0 0.0 598.3205659738744 598.3205659738744 33.64529590452387 0.0 0.0 0.0 0 1.274227503252014 1.3979400086720375 0.0 0.4247425010840047 + {I|L}P{M(Oxidation (M))|F}PNV 4.8828 + + 966 + 1 1.404 95191.4 1.0 13723 5817 19535 HBL1_DMSO_200M_050219_1,19542 HBL1_DMSO_200M_050219_1,19542,IPFPNVKDLQV True True IPFPNVKDLQV 93.990059 635.363574206829 3595214.75 19535.0 ENSG00000136492|ENST00000259008|BRIP1;;nc|ENSG00000136492|Q9BX63-2|BRIP1 6.034677664438884 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19543 94.002 590.0 443070.0 25 0 34548.0 + 26465 NTIEHLLPL 9 219 525.3051396681471 1048.5957264030942 2 525.3052245974541 MULTI CID FTMS 0 0 0 19535 209836.953125 0.9350622449253128 -2 0.113616943359375 8 Unmodified _NTIEHLLPL_ ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 65.23502041540118 0.0231836506122253 3 {I|L}{I|L}{[QS]|[NT]}{M(Oxidation (M))|F}T{I|L} 7 7 49.02 0.0 0.0 4.6748 0.0 0.0 228.1497524608789 0.0 228.1497524608789 0.0 30.84560277754156 0.0 0.0 0 0.5 0.0 1.3996498648046138 0.9802046884880936 {I|L}{I|L}{[QS]|[NT]}{M(Oxidation (M))|F}T{I|L} 4.6748 - 1862 + 1 1.404 203746.4 1.0 13724 5817 19535 HBL1_DMSO_200M_050219_1,19543 HBL1_DMSO_200M_050219_1,19543,NTIEHLLPL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19544 94.012 599.0 184800.0 25 0 2412.3 -1 0 85 1160.192675769329 0 1160.192675769329 PEAK CID FTMS 0 0 0 -1 0 9 3 M{I|L} 2 -1 10.969 0.0 0.0 0.47314 0.0 0.0 1337.8644642322145 733.3417452447874 2071.2062094770017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L} 0.47314 - 11 + 1 1.404 65220.3 1.0 13725 5817 19535 HBL1_DMSO_200M_050219_1,19544 HBL1_DMSO_200M_050219_1,19544, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19545 94.016 226.0 440100.0 25 0 38110.0 27661 PLHLGFII 8 125 455.2816850907098 0 455.2821533083916 PEAK CID FTMS 0 0 0 19535 162482.328125 0.984862904958822 -1 0.0218963623046875 10 Unmodified _PLHLGFII_ ENST00000474820.5_1_2:161129788-161130004:-|nuORF 17.086550045450526 0.4618975036900928 3 {M(Oxidation (M))|F} 1 7 10.797 0.0 0.0 1.1884 0.0 0.0 244.1787672959751 514.2801972896485 758.4589645856236 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.1884 + + 165 + 1 1.404 78402.6 1.0 13726 5817 19535 HBL1_DMSO_200M_050219_1,19545 HBL1_DMSO_200M_050219_1,19545,PLHLGFII False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19546 94.022 290.0 429780.0 25 0 77664.0 + 18744 LALLSLPR 8 111 441.7915717992176 881.5685906652352 2 441.7916137576103 MULTI CID FTMS 0 0 0 19535 160526.328125 0.2986043640008701 -1 0.0218963623046875 11 Unmodified _LALLSLPR_ ENST00000538862.6_1_12:6960483-6960693:-|nuORF 39.957323273325 0.2350051964751539 3 {I|L}A{I|L}PS[R{I|L}]{I|L} 8 3 + 63.065 0.0 0.0 7.1537 7.1537 94.893 0.0 0.0 0.0 33.05490808226782 3.142326649235976 3.142326649235976 34.689330722176805 0 0.9247425010840048 1.6989700043360187 0.3252574989159953 0.4247425010840047 {I|L}A{I|L}PS[R{I|L}]{I|L};{I|L}A[KQ][VP]KV;{I|L}A[KQ]K[VP]V;{I|L}AKKQ[VP]V 7.1537;3.2188;2.8014;2.7356 -;-;-;- 320 + 1 1.404 104008.9 1.0 13727 5817 19535 HBL1_DMSO_200M_050219_1,19546 HBL1_DMSO_200M_050219_1,19546,LALLSLPR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19547 94.037 794.0 305230.0 25 0 29051.0 + 1257 AILKELVTL 9 201 500.3257630245113 998.6369731158228 2 500.3251525759697 MULTI CID FTMS 0 0 0 19535 153487.828125 0.1426565742303456 4 -0.5113983154296875 12 Unmodified _AILKELVTL_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF 62.57269311338072 0.0246576765497938 3 [{I|L}A]{I|L}T[{I|L}V]GVT{I|L} 10 3 + 50.191 0.0 0.0 5.0259 5.0259 86.293 0.0 0.0 0.0 4.891792821417958 9.699915470362017 4.891792821417958 13.256958942739397 0 1.242992819099939 1.5228787452803376 1.8129529932484496 0.0 [{I|L}A]{I|L}T[{I|L}V]GVT{I|L};[{I|L}A]{I|L}[VS]A{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}A{I|L}VT{I|L};[{I|L}A]{I|L}TA{I|L}A{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}RR{I|L}VT{I|L};[{I|L}A][VS]{I|L}A{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}KV{I|L}A{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}A{I|L}T{I|L};[{I|L}A][VS]V{I|L}A{I|L}T{I|L};[{I|L}A]{I|L}TA{I|L}T{I|L}[{I|L}A] 5.0259;3.6984;3.6566;3.5521;3.4167;3.4142;3.3278;3.2307;3.0854;2.9033 -;-;-;-;-;-;-;-;-;- 1772 + 1 1.404 181668.0 1.0 13728 5817 19535 HBL1_DMSO_200M_050219_1,19547 HBL1_DMSO_200M_050219_1,19547,AILKELVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19548 94.05 800.0 224900.0 25 0 52827.0 + 27645 PLGSPLLL 8 152 405.2603300278034 808.5061071224068 2 405.2602722048759 MULTI CID FTMS 0 0 0 19535 158711.71875 0.3381885753519724 20 -2.322578430175781 13 Unmodified _PLGSPLLL_ ENST00000537708.1_1_12:6669555-6669804:-|nuORF 59.79521254764295 0.1151759508933577 3 [{I|L}P][SG]P{I|L}{I|L}{I|L} 8 0 + 61.776 0.0 0.0 7.6408 7.6408 88.965 0.0 0.0 0.0 6.690067809585756 14.904630595263413 6.690067809585756 5.964015683995783 0 0.805462187404089 2.0 1.0356668758921828 0.0 + + [{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L};[EP]KP{I|L}{I|L}{I|L};[EP]K{I|L}P{I|L}{I|L};{[HG]|PP}GS{I|L}{I|L}{I|L}{I|L};[KP]EP{I|L}{I|L}{I|L};[PG]PS{I|L}{I|L}{I|L}{I|L};[PG]SP{I|L}{I|L}{I|L}{I|L};[PG]S{I|L}P{I|L}{I|L}{I|L};[KP]E{I|L}P{I|L}{I|L} 7.6408;6.9031;6.8133;6.0757;5.9016;5.731;5.702;5.6389;5.242;4.9933 +;-;-;-;-;-;-;-;-;- + 256 1 1.404 139469.7 0.7799999713897705 13729 5817 19535 HBL1_DMSO_200M_050219_1,19548 HBL1_DMSO_200M_050219_1,19548,PLGSPLLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19549 94.064 800.0 85696.0 25 0 3580.0 -1 DLEQLMECKKQ 11 105 711.3430746328266 0 711.3386718630791 PEAK CID FTMS 0 0 0 19535 152173.078125 1.0 0 0.0 14 Carbamidomethyl (C) _DLEQLMEC(Carbamidomethyl (C))KKQ_ ENSG00000122970|ENST00000242591|IFT81;nc|ENSG00000122970|Q8WYA0-4|IFT81 7.101721422024254 0.47618401536486 3 {I|L}Y{I|L}HD 5 -1 21.542 0.0 0.0 1.5163 0.0 0.0 482.1531159631157 294.1828707330688 776.3359866961845 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}Y{I|L}HD 1.5163 - 1127 + 1 1.404 54932.5 0.9399999976158142 13730 5817 19535 HBL1_DMSO_200M_050219_1,19549 HBL1_DMSO_200M_050219_1,19549,DLEQLMECKKQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19550 94.079 800.0 138940.0 25 0 12715.0 27153 PFREELLAAI 10 135 386.8879296711427 0 386.5537902712822 PEAK CID FTMS 0 0 0 19535 53167.71484375 0.8381187798124418 1 -0.1869430541992187 15 Unmodified _PFREELLAAI_ ENSG00000204560|ENST00000376442|DHX16 11.640296217721598 0.3623705791714445 3 {M(Oxidation (M))|F} 1 9 6.9897 0.0 0.0 0.90568 0.0 0.0 539.6031318258807 82.06701074771718 621.6701425735979 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.90568 + + 13 + 1 1.404 91928.8 0.7400000095367432 13731 5817 19535 HBL1_DMSO_200M_050219_1,19550 HBL1_DMSO_200M_050219_1,19550,PFREELLAAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19551 94.093 800.0 112520.0 25 0 12238.0 -1 0 106 834.0488121043375 2499.124606913212 3 834.3846313357353 MULTI CID FTMS 0 0 0 19535 113986.625 1.0 0 0.0 16 3 {NN|[MP]|[D{I|L}]|[EV]}A{I|L}{I|L} 5 -1 32.703 0.0 0.0 1.3086 0.0 0.0 0.0 1970.778085266981 1970.778085266981 6.914996084138352 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}A{I|L}{I|L} 1.3086 - 472 1 1.404 67527.5 0.6499999761581421 13732 5817 19535 HBL1_DMSO_200M_050219_1,19551 HBL1_DMSO_200M_050219_1,19551, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19552 94.107 800.0 331840.0 25 0 52697.0 32123 RVNLEECF 8 219 337.16394485288896 0 337.1792175173759 PEAK CID FTMS 0 0 0 19535 33990.26171875 0.4842668362383013 -1 0.0218963623046875 17 Unmodified _RVNLEECF_ ENSG00000134762|ENST00000360428|DSC3;nc|ENSG00000134762|Q14574-2|DSC3 9.347437153973935 0.5488964601725408 3 {I|L}[{M(Oxidation (M))|F}T]{I|L} 4 7 11.682 0.0 0.0 1.7376 0.0 0.0 112.96416436488536 82.06702600650624 195.0311903713916 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {I|L}[{M(Oxidation (M))|F}T]{I|L} 1.7376 - 43 + 1 1.404 213054.1 0.5099999904632568 13733 5817 19535 HBL1_DMSO_200M_050219_1,19552 HBL1_DMSO_200M_050219_1,19552,RVNLEECF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19554 94.111 2.9 21687000.0 25 0 4040100.0 + 4665 DAYVLPKLYV 10 72 590.8342767634228 1179.6540005936456 2 590.8352538943291 MULTI CID FTMS 0 0 0 19553 16630869.0 0.2899147872872297 4 -0.4306488037109375 1 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 47.74868867922204 0.0933642699623533 3 {[DA]|[EG]}YV{I|L} 5 5 47.434 0.0 0.0 4.021 0.0 0.0 0.0 615.3524618575706 615.3524618575706 22.027712246842484 0.0 0.0 0.0 0 1.5 1.5228787452803376 0.3252574989159953 0.0 + {[DA]|[EG]}YV{I|L} 4.021 + + 149 1 1.396 50305.9 1.0 13734 5818 19553 HBL1_DMSO_200M_050219_1,19554 HBL1_DMSO_200M_050219_1,19554,DAYVLPKLYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19555 94.112 4.5 11878000.0 25 0 1662700.0 + 20421 LLIENVASL 9 81 486.29224058057 970.56992822794 2 486.2924987673759 MULTI CID FTMS 0 0 0 19553 14797769.0 0.6841648005724179 1 -0.035064697265625 2 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 48.345845343767074 0.0439967357579942 3 {I|L}{I|L}{I|L}ENV 6 3 34.927 0.0 0.0 3.5986 0.0 0.0 0.0 286.1414363668651 286.1414363668651 7.42631720939039 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.7302046884880937 + {I|L}{I|L}{I|L}ENV 3.5986 + + 451 1 1.396 47192.0 1.0 13735 5818 19553 HBL1_DMSO_200M_050219_1,19555 HBL1_DMSO_200M_050219_1,19555,LLIENVASL True True LLIENVASL 94.112277 486.292498767376 527911920.0 19553.0 nc|ENSG00000233276|P07203-2|GPX1;;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;;ENSG00000233276|ENST00000419783|GPX1;;ENST00000388829.3_1_X:13397321-13397372:-|nuORF 3.508824268976847 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19556 94.113 4.4 15216000.0 25 0 3676800.0 + 13590 HPLVILNI 8 74 459.7920439438144 917.5695349544288 2 459.7924377322197 MULTI CID FTMS 0 0 0 19553 15587298.0 0.8411222850891895 1 -0.035064697265625 3 Unmodified _HPLVILNI_ ENSG00000168090|ENST00000303904|COPS6;ENST00000465027.1_1_7:99686595-99687052:+|nuORF;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 56.04830969593885 0.114297258605095 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L} 8 0 + 79.914 0.0 0.0 8.7094 8.7094 96.049 0.0 0.0 0.0 28.226825097560425 57.97614693140829 28.226825097560425 13.509562869230862 0 0.805462187404089 0.0 2.1237125054200234 0.4247425010840047 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}GG{I|L};[{I|L}P]HV{I|L}{I|L}N{I|L};[{I|L}P]VH{I|L}{I|L}N{I|L};[{I|L}P]V{I|L}H{I|L}N{I|L};[{I|L}P]V{I|L}{I|L}HN{I|L};[{I|L}P]HV{I|L}{I|L}GG{I|L};[{I|L}P]VH{I|L}{I|L}GG{I|L};[{I|L}P]V{I|L}H{I|L}GG{I|L};[{I|L}P]V{I|L}{I|L}HGG{I|L} 8.7094;7.237;5.3549;5.3549;4.8349;3.9868;3.8826;3.8826;3.3626;2.5145 +;-;-;-;-;-;-;-;-;- + 128 1 1.396 56921.1 1.0 13736 5818 19553 HBL1_DMSO_200M_050219_1,19556 HBL1_DMSO_200M_050219_1,19556,HPLVILNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19557 94.115 4.7 17185000.0 25 0 2203700.0 + 43945 YGLPVVVKL 9 87 494.31518021225 986.6158074913 2 494.3152343630791 MULTI CID FTMS 0 0 0 19553 11344883.0 1.0 0 0.0 4 Unmodified _YGLPVVVKL_ ENSG00000168036|ENST00000349496|CTNNB1 39.957323273325 0.0756908302845263 3 YG{I|L}PVVVK{I|L} 9 0 + 58.17 0.0 0.0 5.8959 5.8959 90.842 0.0 0.0 0.0 25.95138927108948 12.05136871872881 12.05136871872881 26.039944911051613 0 0.6989700043360187 1.154901959985743 0.0 0.0 + + YG{I|L}PVVVK{I|L};YG{I|L}PV[K{I|L}]VV 5.8959;3.2566 +;- + 121 + 1 1.396 68420.4 1.0 13737 5818 19553 HBL1_DMSO_200M_050219_1,19557 HBL1_DMSO_200M_050219_1,19557,YGLPVVVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19558 94.116 11.0 5815600.0 25 0 406290.0 + 5646 DPFAFIHKI 9 86 544.3002364449206 1086.5859199566412 2 544.3006469607353 MULTI CID FTMS 0 0 0 19553 5657913.5 0.3744736076788251 4 -0.4306488037109375 5 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 69.10491478415734 0.0214449631113747 3 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H[K{I|L}] 9 0 + 91.379 0.0 0.0 8.4097 8.4097 98.391 0.0 0.0 0.0 64.42393970847391 7.262036441594191 7.262036441594191 91.37903443073904 0 2.079689690656103 2.0 0.0 0.25 + + DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H[K{I|L}] 8.4097 + + 265 + 1 1.396 51949.8 1.0 13738 5818 19553 HBL1_DMSO_200M_050219_1,19558 HBL1_DMSO_200M_050219_1,19558,DPFAFIHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19559 94.117 14.0 4298300.0 25 0 677970.0 + 13274 HIPDVITYL 9 72 535.7982164087542 1069.5818798843084 2 535.7980224490166 MULTI CID FTMS 0 0 0 19553 4162417.25 1.0 0 0.0 6 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 36.04419817259434 0.0971720506436186 3 [H{I|L}][DP]V{I|L}TY{I|L} 9 0 + 43.05 0.0 0.0 4.0249 4.0249 74.25 0.0 0.0 0.0 3.290587192642242 8.072420927871988 3.290587192642242 3.0102999566398125 0 0.6677353201839438 1.5228787452803376 0.5 0.0 + + [H{I|L}][DP]V{I|L}TY{I|L};[H{I|L}][DP]VT{I|L}Y{I|L};[VP]D{I|L}H{I|L}TY{I|L};[Y{I|L}]WV{I|L}TY{I|L};[DP]V{I|L}H{I|L}TY{I|L};[VP]D{I|L}HT{I|L}Y{I|L};[Y{I|L}]WVT{I|L}Y{I|L};[DP]V{I|L}HT{I|L}Y{I|L};[VP]D{I|L}TH{I|L}Y{I|L};[DP]V{I|L}TH{I|L}Y{I|L} 4.0249;3.7435;3.7173;3.6005;3.5527;3.4358;3.319;3.2712;3.1758;3.0112 +;-;-;-;-;-;-;-;-;- + 310 1 1.396 52954.0 1.0 13739 5818 19553 HBL1_DMSO_200M_050219_1,19559 HBL1_DMSO_200M_050219_1,19559,HIPDVITYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19560 94.118 23.0 3229300.0 25 0 744370.0 + 4929 DGLTVHLVI 9 83 483.7845946902921 965.5546364473844 2 483.7850219607353 MULTI CID FTMS 0 0 0 19553 2732614.0 1.0 0 0.0 7 Unmodified _DGLTVHLVI_ ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000175520|ENST00000311659|UBQLN3;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000472638.1_1_1:156020124-156021603:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;nc|ENSG00000160803|Q9NRR5-2|UBQLN4 85.35673624503755 0.0162188719545379 3 [DG]{I|L}TVH{I|L}V{I|L} 9 0 + 61.577 0.0 0.0 6.3774 6.3774 86.817 0.0 0.0 0.0 6.13885281793209 24.97347713643002 6.13885281793209 7.2184874961635614 0 1.5924778212679485 1.3010299956639813 1.1549471895720984 0.0 + + [DG]{I|L}TVH{I|L}V{I|L};[H{I|L}]S{I|L}[DG]{I|L}V{I|L};[H{I|L}]S{I|L}V{[DA]|[EG]}V{I|L};[H{I|L}]VT[DG]{I|L}V{I|L};[HV]T{I|L}[DG]{I|L}V{I|L};[HV]T{I|L}V{[DA]|[EG]}V{I|L};[H{I|L}]VTV{[DA]|[EG]}V{I|L};[HV]{I|L}T[DG]{I|L}V{I|L};[SG]{I|L}EVH{I|L}V{I|L};[HV]{I|L}TV{[DA]|[EG]}V{I|L} 6.3774;5.6298;5.5062;5.318;5.318;5.1945;5.1945;5.0062;4.9209;4.8827 +;-;-;-;-;-;-;-;-;- + 1361 1 1.396 64753.2 1.0 13740 5818 19553 HBL1_DMSO_200M_050219_1,19560 HBL1_DMSO_200M_050219_1,19560,DGLTVHLVI True True DGLTVHLVI 94.118171 483.785021960735 98805048.0 19553.0 nc|ENSG00000135018|Q9UMX0-2|UBQLN1;;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;;ENSG00000175520|ENST00000311659|UBQLN3;;ENST00000472638.1_1_1:156020124-156021603:-|nuORF;;ENSG00000160803|ENST00000368309|UBQLN4;;nc|ENSG00000160803|Q9NRR5-2|UBQLN4;;ENSG00000188021|ENST00000338222|UBQLN2;;ENSG00000135018|ENST00000376395|UBQLN1 4.247748057047526 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19561 94.119 28.0 2408500.0 25 0 177830.0 + 44581 YPFINSRIITV 11 72 661.8768240194503 1321.7390951057005 2 661.8773681521416 MULTI CID FTMS 0 0 0 19553 2432512.0 0.7688002942444164 1 -0.035064697265625 8 Unmodified _YPFINSRIITV_ ENSG00000037474|ENST00000264670|NSUN2;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 36.39500950444726 0.267929034476522 3 YP{M(Oxidation (M))|F}{I|L}N 5 6 63.756 0.0 0.0 4.8236 0.0 0.0 0.0 684.4069760143002 684.4069760143002 38.042359562158126 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + YP{M(Oxidation (M))|F}{I|L}N 4.8236 + + 77 + 1 1.396 55845.0 1.0 13741 5818 19553 HBL1_DMSO_200M_050219_1,19561 HBL1_DMSO_200M_050219_1,19561,YPFINSRIITV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19562 94.121 25.0 2401800.0 25 0 223130.0 + 29204 QGIPVYLFS 9 84 512.2791580445313 1022.5437631558626 2 512.2796508669853 MULTI CID FTMS 0 0 0 19553 2080203.0 0.2130711516498599 6 -0.672882080078125 9 Unmodified _QGIPVYLFS_ ENSG00000169299|ENST00000381967|PGM2 20.453626601364224 0.2830276176381075 3 [VP]NA{I|L}SP 7 7 40.015 0.0 0.0 3.9133 0.0 0.0 0.0 341.13736602135015 341.13736602135015 15.79312592315027 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3054621874040891 0.3807196863200844 [VP]NA{I|L}SP 3.9133 - 233 1 1.396 54756.8 1.0 13742 5818 19553 HBL1_DMSO_200M_050219_1,19562 HBL1_DMSO_200M_050219_1,19562,QGIPVYLFS False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19563 94.122 48.0 1199300.0 25 0 117430.0 + -1 TQLTRKMETL 10 71 618.8337775397009 1235.6530021462015 2 618.8339111208916 MULTI CID FTMS 0 0 0 19553 1068980.625 0.5351526642631502 -2 0.2088394165039062 10 Oxidation (M) _TQLTRKM(Oxidation (M))ETL_ REV__CON__Q7Z3Y8;REV__CON__Q7Z3Z0;REV__ENSG00000204897|ENST00000312150|KRT25 15.248480904072842 0.5916873121453583 3 [QT]{I|L} 3 -1 31.522 0.0 0.0 2.5511 0.0 0.0 0.0 890.4375229804392 890.4375229804392 7.072034164243561 0.0 0.0 0.0 0 0.7059771852360797 1.3010299956639813 0.25 0.0 [QT]{I|L} 2.5511 + + 148 1 1.396 49380.2 1.0 13743 5818 19553 HBL1_DMSO_200M_050219_1,19563 HBL1_DMSO_200M_050219_1,19563,TQLTRKMETL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19564 94.124 73.0 696880.0 25 0 44509.0 -1 0 54 1029.9765094087563 2057.938465884313 2 1030.479785144329 MULTI CID FTMS 0 0 0 19553 1079221.875 0.5659978640464448 1 -0.035064697265625 11 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES{M(Oxidation (M))|F}GD{I|L}ST[DP]AVMGN[KP] 19 -1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES{M(Oxidation (M))|F} + + 52.873 28.06 4.2691 2.5692 2.5692 49.466 0.0 0.0 0.0 0.0 24.812988749020946 0.0 0.0 0 0.0 0.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ES{M(Oxidation (M))|F}GD{I|L}ST[DP]AVMGN[KP] 2.5692 - 441 + 1 1.396 40685.6 1.0 13744 5818 19553 HBL1_DMSO_200M_050219_1,19564 HBL1_DMSO_200M_050219_1,19564, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19565 94.125 46.0 633460.0 25 0 172420.0 -1 0 51 574.679674123364 1721.0171929702915 3 574.6801025271416 MULTI CID FTMS 0 0 0 19553 1051918.75 0.995539718016674 -1 0.1869430541992187 12 3 {I|L} 1 -1 13.979 0.0 0.0 0.81228 0.0 0.0 1589.9221134798604 0.0 1589.9221134798604 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.81228 - 12 + 1 1.396 32256.4 1.0 13745 5818 19553 HBL1_DMSO_200M_050219_1,19565 HBL1_DMSO_200M_050219_1,19565, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19566 94.127 75.0 795130.0 25 0 75480.0 + -1 TNSLTAMLRSL 11 80 611.8263440949961 0 611.8263427615166 PEAK CID FTMS 0 0 0 19553 831010.1875 1.0 0 0.0 13 Oxidation (M) _TNSLTAM(Oxidation (M))LRSL_ REV__ENSG00000105357|ENST00000642316|MYH14;REV__nc|ENSG00000105357|Q7Z406-4|MYH14;REV__nc|ENSG00000105357|Q7Z406-5|MYH14;REV__nc|ENSG00000105357|Q7Z406-6|MYH14;REV__nc|ENSG00000105357|Q7Z406|MYH14 28.49450938151212 0.2463772716552905 3 {I|L}S{I|L}S 4 -1 19.909 0.0 0.0 1.6297 0.0 0.0 313.0657239076209 505.31562219791255 818.3813461055335 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1237125054200234 0.0 {I|L}S{I|L}S 1.6297 - 59 + 1 1.396 52336.8 1.0 13746 5818 19553 HBL1_DMSO_200M_050219_1,19566 HBL1_DMSO_200M_050219_1,19566,TNSLTAMLRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19567 94.128 73.0 656590.0 25 0 61247.0 + 37472 TLFEDSFQQI 10 74 614.2987096193699 1226.5828663055397 2 614.2988769412041 MULTI CID FTMS 0 0 0 19553 801661.875 1.0 0 0.0 14 Unmodified _TLFEDSFQQI_ ENSG00000078747|ENST00000374864|ITCH;ENSG00000123124|ENST00000517970|WWP1;ENSG00000198373|ENST00000359154|WWP2;ENST00000466609.1_1_3:98377983-98378526:+|nuORF;ENST00000483727.5_1_20:33033173-33065666:+|nuORF;ENST00000518683.5_1_8:87410815-87460532:+|nuORF;nc|ENSG00000123124|Q9H0M0-3|WWP1;nc|ENSG00000123124|Q9H0M0-6|WWP1;nc|ENSG00000198373|O00308-2|WWP2;nc|ENSG00000198373|O00308-3|WWP2;nc|ENSG00000289720|Q96J02-3|ITCH;nc|ENSG00000289720|Q96J02|ITCH 43.85829265575387 0.1168243637355526 3 [{I|L}T]{M(Oxidation (M))|F}E{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F} 7 3 34.455 0.0 0.0 2.809 0.0 0.0 0.0 384.1814740538397 384.1814740538397 12.161450971016166 0.0 0.0 0.0 0 0.0 2.0 0.75 0.0 + [{I|L}T]{M(Oxidation (M))|F}E{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F} 2.809 + + 305 1 1.396 42703.9 1.0 13747 5818 19553 HBL1_DMSO_200M_050219_1,19567 HBL1_DMSO_200M_050219_1,19567,TLFEDSFQQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19568 94.13 67.0 1033700.0 25 0 149000.0 + 34117 SLLQTLYKV 9 90 532.8211403360659 1063.6277277389318 2 532.8217651247978 MULTI CID FTMS 0 0 0 19553 763814.0625 0.898178474848886 1 -0.035064697265625 15 Unmodified _SLLQTLYKV_ ENSG00000100401|ENST00000356244|RANGAP1 45.69961567697781 0.0497987121815769 3 {[TV]|[{I|L}S]}{I|L}QT{I|L}YKV 9 0 + 78.247 0.0 0.0 7.3566 7.3566 91.772 0.0 0.0 0.0 60.72956792729022 11.962724883926654 11.962724883926654 9.208187539523747 0 0.7742275032520141 2.0 0.3807196863200844 0.7134679910804405 + + {[TV]|[{I|L}S]}{I|L}QT{I|L}YKV;{[TV]|[{I|L}S]}{I|L}[AG]T{I|L}YKV;[YK][KG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RR 7.3566;6.4909;0.1316 +;-;- + 289 + 1 1.396 57417.2 1.0 13748 5818 19553 HBL1_DMSO_200M_050219_1,19568 HBL1_DMSO_200M_050219_1,19568,SLLQTLYKV True True SLLQTLYKV 94.129938 532.821765124798 15681532.0 19553.0 ENSG00000100401|ENST00000356244|RANGAP1 6.986823240915935 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19569 94.132 68.0 746380.0 25 0 83834.0 + 45540 YVAELIQQL 9 93 538.8030707333949 1075.5915885335896 2 538.8033935427666 MULTI CID FTMS 0 0 0 19553 594750.125 1.0 0 0.0 16 Unmodified _YVAELIQQL_ ENSG00000086504|ENST00000199706|MRPL28 16.149105407346934 0.3995459350917656 3 {[QN]|[E{I|L}]|[KN]}AYV 5 7 22.976 0.0 0.0 2.1361 0.0 0.0 0.0 497.2723521935136 497.2723521935136 3.93462587345574 0.0 0.0 0.0 0 0.0 0.6777807052660807 0.0 0.0 {[QN]|[E{I|L}]|[KN]}AYV 2.1361 - 217 1 1.396 41700.3 1.0 13749 5818 19553 HBL1_DMSO_200M_050219_1,19569 HBL1_DMSO_200M_050219_1,19569,YVAELIQQL False True YVAELIQQL 94.131573 538.803393542767 9029783.0 19553.0 ENSG00000086504|ENST00000199706|MRPL28 3.277738332748413 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19570 94.134 94.0 662360.0 25 0 61736.0 + 4135 DAPFVINAI 9 86 480.263365298556 958.512177663912 2 480.2637817263603 MULTI CID FTMS 0 0 0 19553 488561.34375 0.8015579505621019 1 -0.035064697265625 17 Unmodified _DAPFVINAI_ ENSG00000205084|ENST00000258173|TMEM231;ENST00000564318.1_1_16:75573894-75575375:-|nuORF;nc|ENSG00000205084|Q9H6L2-2|TMEM231;nc|ENSG00000205084|Q9H6L2-3|TMEM231 28.486842064014134 0.1687311288560894 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}NA[W{I|L}] 8 3 + 35.894 0.0 0.0 3.7448 3.7448 81.09 0.0 0.0 0.0 7.689097685623523 0.4128006923421168 0.4128006923421168 9.262137858390808 0 0.0 1.154901959985743 0.3252574989159953 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}NA[W{I|L}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}GGA[W{I|L}];[W{M(Oxidation (M))|F}]Q{I|L}[RP]{I|L};{[SA]|[TG]}[KG]{I|L}NA[W{I|L}];[W{M(Oxidation (M))|F}]Q[RP]{I|L}{I|L};[W{M(Oxidation (M))|F}][AG]{I|L}[RP]{I|L};{[SA]|[TG]}[KG]{I|L}GGA[W{I|L}];[W{M(Oxidation (M))|F}][AG][RP]{I|L}{I|L} 3.7448;2.7785;1.7942;1.4997;1.4267;0.82073;0.53901;0.45331 -;-;-;-;-;-;-;- 170 1 1.396 54074.3 1.0 13750 5818 19553 HBL1_DMSO_200M_050219_1,19570 HBL1_DMSO_200M_050219_1,19570,DAPFVINAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19571 94.136 141.0 426310.0 25 0 41286.0 + 5650 DPFAFIHKI 9 102 363.2027334629652 1086.5863709890957 3 363.2025634646416 MULTI CID FTMS 0 0 0 19553 480451.46875 0.5372238028720616 3 -0.3244552612304687 18 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 32.78568957990786 0.1150597335874693 3 DP 2 7 37.251 0.0 0.0 3.4282 0.0 0.0 0.0 871.4860703892309 871.4860703892309 2.1258853745167627 0.0 0.0 0.0 0 0.2302046884880938 1.6989700043360187 0.0 0.0 + DP 3.4282 + + 162 + 1 1.396 56984.4 1.0 13751 5818 19553 HBL1_DMSO_200M_050219_1,19571 HBL1_DMSO_200M_050219_1,19571,DPFAFIHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19572 94.139 96.0 827590.0 25 0 74726.0 15155 INYVEVIVPL 10 100 579.8420521051584 1157.6695512771166 2 579.3384887576103 MULTI CID FTMS 0 0 0 19553 472821.6875 0.5325276940696644 5 -0.5518646240234375 19 Unmodified _INYVEVIVPL_ ENSG00000140600|ENST00000427482|SH3GL3;ENST00000467735.2_1_15:84280269-84287036:+|nuORF;nc|ENSG00000140600|Q99963-2|SH3GL3;nc|ENSG00000140600|Q99963-3|SH3GL3 13.042465956692816 0.6287021003332052 3 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VV{I|L}P{M(Oxidation (M))|F}[{I|L}P] 10 4 + 52.508 0.0 0.0 4.5357 4.5357 84.394 0.0 0.0 0.0 8.83327057336222 21.267959391884546 8.83327057336222 12.14488032747402 0 0.0 2.0 0.0 0.8862887849978724 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VV{I|L}P{M(Oxidation (M))|F}[{I|L}P];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}P{I|L}VVV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}P{I|L}VV{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[{I|L}V][R{M(Oxidation (M))|F}]{I|L}GP{M(Oxidation (M))|F}[{I|L}P];[{I|L}V][R{M(Oxidation (M))|F}]G{I|L}P{M(Oxidation (M))|F}[{I|L}P];{NN|[MP]|[D{I|L}]|[EV]}V{[DS]|[MA]|[CV]|TT}{I|L}{I|L}E[RV];{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VVM{I|L}{I|L}[{I|L}P];{NN|[MP]|[D{I|L}]|[EV]}V{[DS]|[MA]|[CV]|TT}{I|L}{I|L}[RD]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}MG{I|L}E[RV];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}P{I|L}[W{I|L}][RV] 4.5357;3.4866;3.2707;3.2509;2.9908;2.7737;2.7639;2.4058;2.3616;2.3197 -;-;-;-;-;-;-;-;-;- 404 1 1.396 64057.2 1.0 13752 5818 19553 HBL1_DMSO_200M_050219_1,19572 HBL1_DMSO_200M_050219_1,19572,INYVEVIVPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19573 94.142 168.0 539070.0 25 0 75655.0 -1 ISLDRYCAVM 10 91 593.7828285782753 1185.5511042233504 2 593.7832519412041 MULTI CID FTMS 0 0 0 19553 430343.71875 1.0 0 0.0 20 Oxidation (M) _ISLDRYCAVM(Oxidation (M))_ ENSG00000113749|ENST00000636584|HRH2;nc|ENSG00000113749|P25021-2|HRH2;nc|ENSG00000113749|P25021|HRH2 21.53697664764585 0.484802182336468 3 {[TV]|[{I|L}S]}{I|L}D 4 -1 47.747 0.0 0.0 4.0274 0.0 0.0 0.0 754.3041722145645 754.3041722145645 27.034021960761265 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}{I|L}D 4.0274 + + 131 + 1 1.396 73314.3 1.0 13753 5818 19553 HBL1_DMSO_200M_050219_1,19573 HBL1_DMSO_200M_050219_1,19573,ISLDRYCAVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19575 94.149 279.0 554110.0 25 0 60397.0 + 4526 DAYLVHLI 8 149 472.2659550372491 942.5173571412982 2 472.2662231326103 MULTI CID FTMS 0 0 0 19574 374264.125 0.0768708777172727 6 -0.7614898681640625 1 Unmodified _DAYLVHLI_ ENSG00000105671|ENST00000247003|DDX49;ENST00000595858.5_1_19:19032475-19037138:+|nuORF;ENST00000601803.5_1_19:19032987-19035509:+|nuORF;nc|ENSG00000105671|Q9Y6V7-2|DDX49 45.7499826716795 0.1592378023510922 3 {[DA]|[EG]}Y{I|L}VH{I|L}{I|L} 8 0 + 53.938 0.0 0.0 5.7227 5.7227 91.077 0.0 0.0 0.0 21.71912940366376 10.723010016729653 10.723010016729653 53.93761689982732 0 0.805462187404089 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}Y{I|L}VH{I|L}{I|L} 5.7227 + + 315 + 1 1.396 119599.9 1.0 13754 5819 19574 HBL1_DMSO_200M_050219_1,19575 HBL1_DMSO_200M_050219_1,19575,DAYLVHLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19576 94.151 81.0 1420000.0 25 0 104390.0 + 33274 SFPEVFTTY 9 98 1090.5097855176814 1089.5025090510817 1 1090.511401355267 MULTI CID FTMS 0 0 0 19574 747081.375 0.7654651202181492 6 -0.7614898681640625 2 Unmodified _SFPEVFTTY_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 128.3654064809346 0.0055442937744054 3 [EP]V{M(Oxidation (M))|F}S{M(Oxidation (M))|F}T[YT] 9 4 + 59.873 0.0 0.0 5.4955 5.4955 81.26 0.0 0.0 0.0 8.133345013315264 0.5529443103433351 0.5529443103433351 4.643783536941726 0 0.9005149978319906 1.0969100130080565 1.424742501084005 0.0 [EP]V{M(Oxidation (M))|F}S{M(Oxidation (M))|F}T[YT];[EP]VS{M(Oxidation (M))|F}{M(Oxidation (M))|F}T[YT];[EP]V{M(Oxidation (M))|F}SPDT[QA];[EP]{M(Oxidation (M))|F}SV{M(Oxidation (M))|F}T[YT];[EP]{M(Oxidation (M))|F}VS{M(Oxidation (M))|F}T[YT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PEV{M(Oxidation (M))|F}T[YT];[EP]V{M(Oxidation (M))|F}SP[QA]{[ES]|[DT]|[{I|L}C]};[EP]V{M(Oxidation (M))|F}ST{M(Oxidation (M))|F}[YT];[EP]VS{M(Oxidation (M))|F}PDT[QA];[EP]{M(Oxidation (M))|F}SVPDT[QA] 5.4955;5.0693;4.9898;4.8722;4.77;4.749;4.7235;4.5805;4.5635;4.3665 -;-;-;-;-;+;-;-;-;- + 10967 1 1.396 76973.3 1.0 13755 5819 19574 HBL1_DMSO_200M_050219_1,19576 HBL1_DMSO_200M_050219_1,19576,SFPEVFTTY True True SFPEVFTTY 94.150923 1090.51140135527 28416120.0 19574.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 7.366361141204834 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19577 94.157 359.0 623590.0 25 0 54818.0 + -1 MYFIVRSL 8 161 515.1528358149292 0 514.7841064333916 PEAK CID FTMS 0 0 0 19574 70611.1796875 0.5392259233247255 -1 0.035064697265625 3 2 Carbamidomethyl (C) _DDC(Carbamidomethyl (C))MDC(Carbamidomethyl (C))DV_ ENSG00000174851|ENST00000376901|YIF1A 0.7936320650641473 0.5979579398327216 3 Y{M(Oxidation (M))|F}{I|L}{I|L}Q{M(Oxidation (M))|F} 6 -1 22.278 0.0 0.0 2.1665 0.0 0.0 131.7764062573762 82.06703363590077 213.84343989327692 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6694451763165201 Y{M(Oxidation (M))|F}{I|L}{I|L}Q{M(Oxidation (M))|F} 2.1665 - 833 + 1 1.396 177095.7 1.0 13756 5819 19574 HBL1_DMSO_200M_050219_1,19577 HBL1_DMSO_200M_050219_1,19577,DDCMDCDV False False MYFIVRSL 94.1574 514.784106433392 2965267.25 19574.0 ENSG00000174851|ENST00000376901|YIF1A 5.495894114176433 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19578 94.162 251.0 396230.0 25 0 38208.0 + 15772 ISDVVNYFLSV 11 116 628.3322460396369 1254.6499391460736 2 628.3329345583916 MULTI CID FTMS 0 0 0 19574 306317.84375 0.0609726863552052 7 -0.939056396484375 4 Unmodified _ISDVVNYFLSV_ ENST00000368468.3_1_6:119499937-119500069:-|nuORF 51.41523569358685 0.1097924807909074 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SV{M(Oxidation (M))|F}{I|L}W 10 7 + 53.596 0.0 0.0 4.2718 4.2718 76.47 0.0 0.0 0.0 7.054760321208427 7.054760321208427 7.054760321208427 3.979400086720375 0 0.3252574989159953 1.0 1.1750142749943082 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SV{M(Oxidation (M))|F}{I|L}W;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GY{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{M(Oxidation (M))|F}VD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}SV;[VS]{I|L}[YN]DV{M(Oxidation (M))|F}{I|L}[VS];{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{I|L}VD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}SV;{[TV]|[{I|L}S]}V[YN]DV{M(Oxidation (M))|F}{I|L}[VS];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SV{I|L}{M(Oxidation (M))|F}W;[VS]{I|L}G[YG]DV{M(Oxidation (M))|F}{I|L}[VS];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[QT]DV{M(Oxidation (M))|F}{I|L}[VS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SV{M(Oxidation (M))|F}{I|L}W 4.2718;3.9546;3.7095;3.5748;3.4685;3.3744;3.3731;3.3047;3.2242;3.1907 -;-;-;-;-;-;-;-;-;- 4013 1 1.396 84221.6 1.0 13757 5819 19574 HBL1_DMSO_200M_050219_1,19578 HBL1_DMSO_200M_050219_1,19578,ISDVVNYFLSV True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19579 94.173 608.0 207140.0 25 0 28257.0 + 35915 SVPAGFLLA 9 92 874.5041207616039 873.4968442950038 1 874.5038329958916 MULTI CID FTMS 0 0 0 19574 282674.96875 0.2459867251564149 7 -0.939056396484375 5 Unmodified _SVPAGFLLA_ ENSG00000051523|ENST00000261623|CYBA;ENST00000563526.5_1_16:88712508-88712646:-|nuORF 60.38955033654506 0.025866396858536 3 [PA]G{M(Oxidation (M))|F}{I|L}SV{I|L}A 9 4 + 63.005 0.0 0.0 7.2129 7.2129 83.657 0.0 0.0 0.0 10.713337517843655 14.973024840566469 10.713337517843655 2.728787452803374 0 0.3494850021680094 1.0969100130080565 1.25 0.0 [PA]G{M(Oxidation (M))|F}{I|L}SV{I|L}A;[PA]G{M(Oxidation (M))|F}{I|L}{I|L}SVA;[PA]G{M(Oxidation (M))|F}{I|L}S{I|L}VA;[PA]G{M(Oxidation (M))|F}[VS]{I|L}{I|L}A;[VS]W{I|L}SV{I|L}A;[QP]{M(Oxidation (M))|F}{I|L}SV{I|L}A;[PA]G[VS]{M(Oxidation (M))|F}{I|L}{I|L}A;[VS]W{I|L}{I|L}SVA;[QP]{M(Oxidation (M))|F}{I|L}{I|L}SVA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GAPSV{I|L}A 7.2129;6.9006;6.3821;6.185;5.9865;5.9048;5.7804;5.6741;5.5924;5.2744 -;-;-;-;-;-;-;-;-;- 1533 1 1.396 88833.8 1.0 13758 5819 19574 HBL1_DMSO_200M_050219_1,19579 HBL1_DMSO_200M_050219_1,19579,SVPAGFLLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19580 94.176 140.0 508500.0 25 0 55707.0 + 35881 SVLPDSVEIGL 11 96 564.810817672093 1127.607082410986 2 564.8109008669853 MULTI CID FTMS 0 0 0 19574 265639.53125 0.1965623586562714 4 -0.5167999267578125 6 Unmodified _SVLPDSVEIGL_ ENSG00000020129|ENST00000373243|NCDN;nc|ENSG00000020129|Q9UBB6-2|NCDN 14.218169984304629 0.7393924188826537 3 [VS][DP]E{I|L} 6 5 27.214 0.0 0.0 2.4134 0.0 0.0 0.0 484.2749650616296 484.2749650616296 -3.140631798426263 0.0 -3.140631798426263 0.0 0 0.0 1.0457574905606752 1.1861818737241734 0.0 [VS][DP]E{I|L} 2.4134 - 502 1 1.396 57329.3 1.0 13759 5819 19574 HBL1_DMSO_200M_050219_1,19580 HBL1_DMSO_200M_050219_1,19580,SVLPDSVEIGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19581 94.187 683.0 370850.0 25 0 18777.0 + 45688 YWPTYTPMEV 10 191 643.7910168561716 1285.5674807791431 2 643.7907592654228 MULTI CID FTMS 0 0 0 19574 248402.96875 0.3863580136201626 -3 0.2439041137695312 7 Unmodified _YWPTYTPMEV_ ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A 136.33342141710068 0.0001893170704583 3 [WY][{M(Oxidation (M))|F}V]DTPMEV 10 3 + 77.931 0.0 0.0 6.062 6.062 83.519 0.0 0.0 0.0 4.8289229357206125 8.45098040014257 4.8289229357206125 4.8289229357206125 0 2.110924374808178 1.6989700043360187 1.6520898241269029 0.0 [WY][{M(Oxidation (M))|F}V]DTPMEV;[{M(Oxidation (M))|F}V]C[{M(Oxidation (M))|F}V]DTPMEV;[{M(Oxidation (M))|F}V]WYDTPMEV;[WY][{M(Oxidation (M))|F}V]DTPMD{I|L};[WY][{M(Oxidation (M))|F}V]DTG[NG]EV;[{M(Oxidation (M))|F}V]MPT[{M(Oxidation (M))|F}T]TP{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}V]M{M(Oxidation (M))|F}ADTPMEV;[{M(Oxidation (M))|F}V]C[{M(Oxidation (M))|F}V]DTPMD{I|L};[{M(Oxidation (M))|F}V]MPEGYTP{M(Oxidation (M))|F}V;[TP]YYWTPM{NN|[MP]|[D{I|L}]|[EV]} 6.062;5.6863;5.457;5.4046;5.1036;5.061;5.0544;5.029;5.0094;5.0081 -;-;-;-;-;-;-;-;-;- 19297 + 1 1.396 184042.6 1.0 13760 5819 19574 HBL1_DMSO_200M_050219_1,19581 HBL1_DMSO_200M_050219_1,19581,YWPTYTPMEV True True YWPTYTPMEV 94.187464 643.790759265423 26737587.0 19574.0 nc|ENSG00000139842|Q13619-2|CUL4A;;ENSG00000139842|ENST00000375440|CUL4A 8.168233871459961 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19582 94.193 322.0 503590.0 25 0 45634.0 + 10568 FVIDLQTRL 9 177 552.8240295520234 1103.6335061708469 2 552.8258544802666 MULTI CID FTMS 0 0 0 19574 188604.4375 0.0999153904488749 6 -0.7614898681640625 8 Unmodified _FVIDLQTRL_ ENSG00000131051|ENST00000253363|RBM39;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;nc|ENSG00000131051|Q14498-3|RBM39 38.61474834105838 0.0830609365873449 3 {M(Oxidation (M))|F}V{I|L}D{I|L}Q 6 3 54.742 0.0 0.0 4.9602 0.0 0.0 0.0 385.2226656549438 385.2226656549438 19.5391357075249 0.0 0.0 0.0 0 0.5994850021680094 0.8239087409443188 0.0 0.3252574989159953 + {M(Oxidation (M))|F}V{I|L}D{I|L}Q 4.9602 + + 1932 + 1 1.396 124526.1 1.0 13761 5819 19574 HBL1_DMSO_200M_050219_1,19582 HBL1_DMSO_200M_050219_1,19582,FVIDLQTRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19583 94.207 800.0 242410.0 25 0 28894.0 + 34138 SLLVEEYNGY 10 191 396.1914554106719 1185.5525368322158 3 396.1913940310478 MULTI CID FTMS 0 0 0 19574 187335.296875 0.9774378575421538 1 -0.188140869140625 9 Unmodified _SLLVEEYNGY_ REV__ENSG00000083544|ENST00000377881|TDRD3;REV__ENST00000471710.2_1_13:61103135-61109406:+|nuORF;REV__nc|ENSG00000083544|Q9H7E2-2|TDRD3;REV__nc|ENSG00000083544|Q9H7E2|TDRD3 27.628801355627647 0.3479284626772844 3 {[TV]|[{I|L}S]}[MT]DCT{M(Oxidation (M))|F}R{I|L} 10 -1 + 57.415 0.0 0.0 4.8429 4.8429 78.995 0.0 0.0 0.0 22.68434050485965 4.651598430413678 4.651598430413678 4.651598430413678 0 0.3807196863200844 2.0 0.6139829889124311 0.2396518287104437 {[TV]|[{I|L}S]}[MT]DCT{M(Oxidation (M))|F}R{I|L};{[TV]|[{I|L}S]}{I|L}D{I|L}[{M(Oxidation (M))|F}T]C(Carbamidomethyl (C)){[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}[MT]DCT{I|L}[R{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}{I|L}{I|L}D[{M(Oxidation (M))|F}T]C(Carbamidomethyl (C)){[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}[MT]D{M(Oxidation (M))|F}G{M(Oxidation (M))|F}R{I|L};{[TV]|[{I|L}S]}{I|L}D{I|L}{[YC]|[HE]}C(Carbamidomethyl (C))S{I|L};{[TV]|[{I|L}S]}{I|L}D{I|L}[{M(Oxidation (M))|F}T][CG]{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}[MT]DC{I|L}T[R{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}[MT]D{M(Oxidation (M))|F}G{I|L}[R{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}{I|L}{I|L}D{[YC]|[HE]}C(Carbamidomethyl (C))S{I|L} 4.8429;4.4506;4.3719;4.1966;3.979;3.7301;3.6775;3.6591;3.508;3.4762 -;-;-;-;-;-;-;-;-;- 560 + 1 1.396 151966.3 0.7799999713897705 13762 5819 19574 HBL1_DMSO_200M_050219_1,19583 HBL1_DMSO_200M_050219_1,19583,SLLVEEYNGY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19584 94.221 800.0 333270.0 25 0 39499.0 + 11052 KLQEVLDYL 9 201 561.3133888964916 1120.612224859783 2 561.3181640505791 MULTI CID FTMS 0 0 0 19574 167677.703125 0.6373670356983218 -8 0.7180557250976562 10 Unmodified _GDILALFPYL_ ENSG00000144744|ENST00000361055|UBA3;nc|ENSG00000144744|Q8TBC4-2|UBA3 18.1463463914782 0.5430639438673815 3 [YV]PM 4 9 39.085 0.0 0.0 3.4878 0.0 0.0 0.0 627.3637342916904 627.3637342916904 5.442234841101175 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 [YV]PM 3.4878 - 1605 + 1 1.396 198572.1 0.9300000071525574 13763 5819 19574 HBL1_DMSO_200M_050219_1,19584 HBL1_DMSO_200M_050219_1,19584,GDILALFPYL False False KLQEVLDYL 94.220979 560.8171 1880226.625 19574.0 ENSG00000144744|ENST00000361055|UBA3;;nc|ENSG00000144744|Q8TBC4-2|UBA3 4.099488099416097 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19585 94.236 800.0 265490.0 25 0 17574.0 + 42222 VSIGDLYQKL 10 175 568.3206792616899 1134.6268055901796 2 568.3205444216728 MULTI CID FTMS 0 0 0 19574 167687.734375 0.3181240395080336 7 -0.939056396484375 11 Unmodified _VSIGDLYQKL_ REV__ENSG00000139537|ENST00000320516|CCDC65;REV__nc|ENSG00000139537|Q8IXS2-2|CCDC65 34.40172386719151 0.2166836008404837 3 [VS]GD{I|L}{I|L}VSV 9 -1 41.262 0.0 0.0 3.6366 0.0 0.0 0.0 262.11493970566715 262.11493970566715 25.020089587697345 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.0501648626366045 0.0 [VS]GD{I|L}{I|L}VSV 3.6366 - 1810 1 1.396 162490.5 0.7900000214576721 13764 5819 19574 HBL1_DMSO_200M_050219_1,19585 HBL1_DMSO_200M_050219_1,19585,VSIGDLYQKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19586 94.25 800.0 133800.0 25 0 13757.0 + 31973 RVFEYMSYL 9 153 604.2936879672181 1206.5728230012362 2 604.2941161990166 MULTI CID FTMS 0 0 0 19574 147500.203125 1.0 0 0.0 12 Unmodified _RVFEYMSYL_ ENSG00000171425|ENST00000270451|ZNF581 24.99096001346401 0.2132109383330889 3 [{M(Oxidation (M))|F}V]REYMSY{I|L} 9 2 + 56.499 0.0 0.0 4.6826 4.6826 85.559 0.0 0.0 0.0 7.4380988433645 38.13608784304506 7.4380988433645 15.25537232829295 0 0.5 0.5686362358410126 0.5 0.0 [{M(Oxidation (M))|F}V]REYMSY{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SMYE[{I|L}A]S{I|L};[{I|L}T]P[YG]YMSY{I|L};[{M(Oxidation (M))|F}E][RV]YMSY{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SMYE[{I|L}T]G{I|L};[{I|L}T]A[{M(Oxidation (M))|F}V]YMSY{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQYMSY{I|L};[VS]V[{M(Oxidation (M))|F}V]YMSY{I|L};[{M(Oxidation (M))|F}V]R[YT]MDY{I|L};[{I|L}V][Y{M(Oxidation (M))|F}][SG]MDY{I|L} 4.6826;3.4182;3.1166;3.1007;3.0749;3.0685;2.9067;2.8962;2.879;2.8264 -;-;-;-;-;-;-;-;-;- 736 1 1.396 78810.1 0.7799999713897705 13765 5819 19574 HBL1_DMSO_200M_050219_1,19586 HBL1_DMSO_200M_050219_1,19586,RVFEYMSYL False True RVFEYMSYL 94.250106 604.294116199017 1387312.25 19574.0 ENSG00000171425|ENST00000270451|ZNF581 6.623099327087402 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19587 94.265 800.0 219270.0 25 0 46445.0 + 3188 AVVPGLLEV 9 128 896.5454700166548 895.5381935500548 1 896.5464355349541 MULTI CID FTMS 0 0 0 19574 133344.796875 0.3308397782747356 -3 0.2439041137695312 13 Unmodified _AVVPGLLEV_ ENSG00000160796|ENST00000450053|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 70.71552829651908 0.0208223590022201 3 {[VA]|[{I|L}G]}P{I|L}GV{I|L}EV 9 3 + 63.04 0.0 0.0 7.0393 7.0393 85.427 0.0 0.0 0.0 12.099653886374815 16.478174818886373 12.099653886374815 4.030899869919438 0 1.035666875892183 0.8860566476931632 0.0 0.0 {[VA]|[{I|L}G]}P{I|L}GV{I|L}EV;{[VA]|[{I|L}G]}VPAV{I|L}EV;{[VA]|[{I|L}G]}P{I|L}G{I|L}VEV;{[VA]|[{I|L}G]}P{I|L}VG{I|L}EV;{[VA]|[{I|L}G]}P{I|L}EVAVV;{[VA]|[{I|L}G]}PVAV{I|L}EV;{[VA]|[{I|L}G]}P{I|L}R{I|L}EV;{[VA]|[{I|L}G]}PAVV{I|L}EV;{[VA]|[{I|L}G]}P{I|L}AVVEV;{[VA]|[{I|L}G]}VPA{I|L}VEV 7.0393;6.5892;6.5507;6.438;6.3703;6.367;6.3159;6.2588;6.2146;6.1006 -;-;-;-;-;-;-;-;-;- 2971 1 1.396 114879.8 0.8399999737739563 13766 5819 19574 HBL1_DMSO_200M_050219_1,19587 HBL1_DMSO_200M_050219_1,19587,AVVPGLLEV True True AVVPGLLEV 94.265129 896.546435534954 5829179.0 19574.0 nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;;ENSG00000160796|ENST00000450053|NBEAL2;;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 5.800154844919841 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19588 94.279 800.0 142450.0 25 0 23264.0 -1 0 150 861.5163626777384 1721.0181724222766 2 861.5190307497978 MULTI CID FTMS 0 0 0 19574 114327.46875 0.7377531963943151 1 -0.188140869140625 14 3 {M(Oxidation (M))|F}{I|L}A 3 -1 13.188 0.0 0.0 0.76627 0.0 0.0 1009.6193209591892 377.2190340631469 1386.838355022336 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}A 0.76627 - 348 + 1 1.396 78597.8 0.800000011920929 13767 5819 19574 HBL1_DMSO_200M_050219_1,19588 HBL1_DMSO_200M_050219_1,19588, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19589 94.287 454.0 123160.0 25 0 20255.0 -1 0 79 710.343483991993 2837.344830101572 4 710.8455688357353 MULTI CID FTMS 0 0 0 19574 114789.359375 1.0 0 0.0 15 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 36.068 0.0 0.0 1.2712 0.0 0.0 0.0 1895.780290877216 1895.780290877216 26.60396270529162 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.2712 - 153 1 1.396 48662.8 1.0 13768 5819 19574 HBL1_DMSO_200M_050219_1,19589 HBL1_DMSO_200M_050219_1,19589, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19590 94.302 800.0 127680.0 25 0 9869.0 + 31264 RLWEKLTLL 9 152 586.3646057802825 0 586.3647338747978 PEAK CID FTMS 0 0 0 19574 116893.3671875 1.0 0 0.0 16 Unmodified _RLWEKLTLL_ ENSG00000130921|ENST00000253233|MTRFR;ENST00000538888.5_1_12:123738221-123738578:+|nuORF;nc|ENSG00000130921|Q9H3J6-2|MTRFR 29.081581746732265 0.1187435359889091 3 T{I|L}K 3 7 16.075 0.0 0.0 1.3731 0.0 0.0 244.1790884142775 581.2853487604124 825.4644371746899 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.5 0.0 T{I|L}K 1.3731 - 251 + 1 1.396 81959.8 0.6399999856948853 13769 5819 19574 HBL1_DMSO_200M_050219_1,19590 HBL1_DMSO_200M_050219_1,19590,RLWEKLTLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19591 94.316 800.0 184180.0 25 0 7263.2 + 12060 GQFDGLVEL 9 138 977.4934068747228 976.4861304081228 1 977.4885131716728 MULTI CID FTMS 0 0 0 19574 106805.9140625 0.1438655067535087 4 -0.5167999267578125 17 Unmodified _GQFDGLVEL_ ENSG00000074370|ENST00000397041|ATP2A3;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3 39.94969957227396 0.0757326808254658 3 {[VA]|[{I|L}G]}VD{M(Oxidation (M))|F}QGE{I|L} 9 5 + 57.041 0.0 0.0 5.8414 5.8414 76.771 0.0 0.0 0.0 0.9146359496386722 14.092568545288046 0.9146359496386722 0.9146359496386722 0 0.0 1.0457574905606752 0.9896518287104438 0.4247425010840047 {[VA]|[{I|L}G]}VD{M(Oxidation (M))|F}QGE{I|L};{NN|[MP]|[D{I|L}]|[EV]}GV{M(Oxidation (M))|F}QGE{I|L};{[VA]|[{I|L}G]}DV{M(Oxidation (M))|F}QGE{I|L};{[DA]|[EG]}VV{M(Oxidation (M))|F}QGE{I|L};[TP]SV{M(Oxidation (M))|F}QGE{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}VQGE{I|L};{NN|[MP]|[D{I|L}]|[EV]}GV{M(Oxidation (M))|F}[AG]GE{I|L};{[VA]|[{I|L}G]}D{M(Oxidation (M))|F}VQGE{I|L};{[DA]|[EG]}V{M(Oxidation (M))|F}VQGE{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{[QG]|[NA]}VE{I|L} 5.8414;5.7478;5.5332;5.4298;5.0613;5.0138;4.8048;4.7991;4.6958;4.6819 -;-;-;-;-;-;-;-;-;- 5767 1 1.396 97706.0 0.7200000286102295 13770 5819 19574 HBL1_DMSO_200M_050219_1,19591 HBL1_DMSO_200M_050219_1,19591,GQFDGLVEL True False GQFDGLVEL 94.315909 977.488513171673 7617748.5 19574.0 nc|ENSG00000074370|Q93084-3|ATP2A3;;ENSG00000074370|ENST00000397041|ATP2A3;;nc|ENSG00000074370|Q93084-1|ATP2A3;;nc|ENSG00000074370|Q93084-4|ATP2A3;;nc|ENSG00000074370|Q93084-6|ATP2A3;;nc|ENSG00000074370|Q93084-5|ATP2A3;;nc|ENSG00000074370|Q93084-7|ATP2A3 2.734944462776184 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19592 94.33 800.0 195670.0 25 0 13658.0 + 24486 MIFVDNFVHA 10 172 596.7955316927683 0 596.7944824099541 PEAK CID FTMS 0 0 0 19574 86926.9140625 0.9031386021481376 1 -0.188140869140625 18 Unmodified _MIFVDNFVHA_ ENSG00000133597|ENST00000072869|ADCK2 22.736283301280096 0.276231959287006 3 {M(Oxidation (M))|F}V 2 8 14.578 0.0 0.0 1.2235 0.0 0.0 244.1263668279749 698.2917405923661 942.4181074203408 0.0 0.0 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.0 + {M(Oxidation (M))|F}V 1.2235 + + 147 + 1 1.396 121615.1 0.550000011920929 13771 5819 19574 HBL1_DMSO_200M_050219_1,19592 HBL1_DMSO_200M_050219_1,19592,MIFVDNFVHA False True MIFVDNFVHA 94.329743 596.794482409954 827404.4375 19574.0 ENSG00000133597|ENST00000072869|ADCK2 5.261844317118327 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19594 94.334 24.0 3455100.0 25 0 1124700.0 + 33549 SILQSLVPA 9 84 464.2792162609106 926.5438795886212 2 464.2791931033134 MULTI CID FTMS 0 0 0 19593 2500748.5 0.4776099491898722 2 -0.2074432373046875 1 Unmodified _SILQSLVPA_ ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 39.957323273325 0.0756908302845263 3 {[TV]|[{I|L}S]}Q{I|L}S 5 5 38.461 0.0 0.0 4.151 0.0 0.0 0.0 395.2278144853588 395.2278144853588 16.03556095747217 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.305462187404089 0.0 {[TV]|[{I|L}S]}Q{I|L}S 4.151 - 467 1 1.43 69441.3 1.0 13772 5820 19593 HBL1_DMSO_200M_050219_1,19594 HBL1_DMSO_200M_050219_1,19594,SILQSLVPA True True SILQSLVPA 94.334301 464.279193103313 46121560.0 19593.0 ENST00000597227.5_1_19:50432514-50434160:+|nuORF;;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;;ENST00000423777.6_1_19:50432412-50434160:+|nuORF 4.314778010050456 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19595 94.335 19.0 5060000.0 25 0 735570.0 + 25295 NAEEILRIV 9 100 528.8060836147177 1055.5976142962354 2 529.3077880740166 MULTI CID FTMS 0 0 0 19593 3522054.5 0.807235694850835 2 -0.2074432373046875 2 Unmodified _NAEEILRIV_ REV__ENSG00000163659|ENST00000295924|TIPARP 24.020572477871973 0.2255576514309169 3 TDP{I|L}[R{I|L}]{I|L}V 8 -1 32.964 0.0 0.0 3.1228 0.0 0.0 130.0362355977798 0.0 130.0362355977798 0.0 1.5372095838382194 0.0 0.0 0 0.3054621874040891 0.0 0.2742275032520141 0.0 TDP{I|L}[R{I|L}]{I|L}V 3.1228 - 202 + 1 1.43 78353.2 1.0 13773 5820 19593 HBL1_DMSO_200M_050219_1,19595 HBL1_DMSO_200M_050219_1,19595,NAEEILRIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19596 94.337 13.0 8612600.0 25 0 1195500.0 41759 VPVALFKVL 9 88 493.3239794124513 984.6334058917024 2 493.3241760134697 MULTI CID FTMS 0 0 0 19593 4515877.0 0.7104579313988245 1 -0.1012496948242187 3 Unmodified _VPVALFKVL_ ENST00000320583.9_3_7:99162026-99162146:+|nuORF 30.22481116460888 0.1466181017706357 3 V{I|L}TV{I|L} 5 5 42.607 0.0 0.0 4.3272 0.0 0.0 441.2702198712906 0.0 441.2702198712906 0.0 16.0212737766562 0.0 0.0 0 0.805462187404089 0.0 0.5 0.0 V{I|L}TV{I|L} 4.3272 - 221 1 1.43 88608.4 1.0 13774 5820 19593 HBL1_DMSO_200M_050219_1,19596 HBL1_DMSO_200M_050219_1,19596,VPVALFKVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19597 94.338 71.0 1011900.0 25 0 151250.0 + 17399 KMPDDVWLV 9 92 551.7836413920712 1101.5527298509423 2 551.7839843630791 MULTI CID FTMS 0 0 0 19593 693285.375 0.410384415718179 -2 0.22320556640625 4 Unmodified _KMPDDVWLV_ ENSG00000110514|ENST00000706887|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6|MADD 39.957323273325 0.0756908302845263 3 WTW{I|L}V 5 6 32.193 0.0 0.0 2.9225 0.0 0.0 398.1817799298844 0.0 398.1817799298844 0.0 13.264837301042718 0.0 0.0 0 0.7742275032520141 0.0 0.6747425010840047 0.0 WTW{I|L}V 2.9225 - 221 1 1.43 64500.8 1.0 13775 5820 19593 HBL1_DMSO_200M_050219_1,19597 HBL1_DMSO_200M_050219_1,19597,KMPDDVWLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19598 94.341 154.0 1022700.0 25 0 132410.0 + 21536 LPIVPQLQV 9 138 503.8181862993047 1005.6218196654096 2 503.8185912966728 MULTI CID FTMS 0 0 0 19593 428574.875 0.4888669244556656 -2 0.22320556640625 5 Unmodified _LPIVPQLQV_ ENSG00000095015|ENST00000399503|MAP3K1 81.86404211737425 0.017065112157077 3 {I|L}{I|L}PVPQ{I|L}QV 9 2 + 54.821 0.0 0.0 5.4514 5.4514 75.068 0.0 0.0 0.0 0.6694678963061307 9.137342758552691 0.6694678963061307 0.6694678963061307 0 1.0673851849885578 1.5228787452803376 0.0 0.3054621874040891 {I|L}{I|L}PVPQ{I|L}QV;[{I|L}P]{I|L}VPQ{I|L}QV;[QP]{I|L}{I|L}PV{I|L}QV;[QP]{I|L}VP{I|L}{I|L}QV;{I|L}{I|L}PVP[AG]{I|L}QV;[AG]P{I|L}{I|L}PV{I|L}QV;[{I|L}P]Q{I|L}PV{I|L}QV;[{I|L}P]{I|L}VP[AG]{I|L}QV;[AG]P{I|L}VP{I|L}{I|L}QV;[{I|L}P]QVP{I|L}{I|L}QV 5.4514;5.3849;4.6732;4.5945;4.232;4.2276;4.2109;4.1654;4.1489;4.1322 -;+;-;-;-;-;-;-;-;- + 1580 1 1.43 120878.0 1.0 13776 5820 19593 HBL1_DMSO_200M_050219_1,19598 HBL1_DMSO_200M_050219_1,19598,LPIVPQLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19599 94.345 204.0 550780.0 25 0 77226.0 + 35824 SVLDDKLVFV 10 120 567.8245492929235 1133.634545652647 2 567.8245117068291 MULTI CID FTMS 0 0 0 19593 404671.34375 0.8223994089157244 -2 0.22320556640625 6 Unmodified _SVLDDKLVFV_ ENSG00000177119|ENST00000320560|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF;nc|ENSG00000177119|Q4KMQ2-2|ANO6;nc|ENSG00000177119|Q4KMQ2-3|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6 42.312485326615175 0.1331477410672653 3 [VS]GD{I|L}{I|L}VSV{M(Oxidation (M))|F}V 11 5 + 89.417 0.0 0.0 7.8876 7.8876 85.256 0.0 0.0 0.0 25.000860494307105 8.292363864933677 8.292363864933677 2.693569161539628 0 1.1677353201839438 2.0 2.1778259348524363 0.0 [VS]GD{I|L}{I|L}VSV{M(Oxidation (M))|F}V;[VS]{I|L}DG{I|L}VSV{M(Oxidation (M))|F}V;[VS]GD{I|L}V{I|L}SV{M(Oxidation (M))|F}V;[VS]{I|L}DGV{I|L}SV{M(Oxidation (M))|F}V;[VS]GD{I|L}VS{I|L}V{M(Oxidation (M))|F}V;[VS]{I|L}DGVS{I|L}V{M(Oxidation (M))|F}V;[VS]G{I|L}VEVSV{M(Oxidation (M))|F}V;[VS]{I|L}GVEVSV{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}VDG{I|L}VSV{M(Oxidation (M))|F}V;[VS]G{I|L}VD{I|L}SV{M(Oxidation (M))|F}V 7.8876;7.65;7.2862;7.0486;6.5133;6.2756;6.2297;6.1785;5.6823;5.6283 -;-;-;-;-;-;-;-;-;- 3427 1 1.43 92247.1 1.0 13777 5820 19593 HBL1_DMSO_200M_050219_1,19599 HBL1_DMSO_200M_050219_1,19599,SVLDDKLVFV False True SVLDDKLVFV 94.345291 567.824511706829 14418540.0 19593.0 ENSG00000177119|ENST00000320560|ANO6;;nc|ENSG00000177119|Q4KMQ2-3|ANO6;;ENST00000426898.2_1_12:45610123-45776982:+|nuORF;;nc|ENSG00000177119|Q4KMQ2-2|ANO6;;nc|ENSG00000177119|Q4KMQ2-4|ANO6 5.372423966725667 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19600 94.35 231.0 735860.0 25 0 53422.0 + 29454 QLIDKVWQL 9 157 571.8325699763662 0 571.8326293826103 PEAK CID FTMS 0 0 0 19593 372800.625 0.0441495883365699 -2 0.22320556640625 7 Unmodified _QLIDKVWQL_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 131.26759243768294 1.9435854781180683e-06 3 Q{I|L}{I|L}QWEQ 7 5 37.45 0.0 0.0 3.2803 0.0 0.0 131.09478817025996 82.06695734195546 213.16174551221545 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.5752574989159953 1.642642683904553 Q{I|L}{I|L}QWEQ 3.2803 - 2062 + 1 1.43 129524.8 1.0 13778 5820 19593 HBL1_DMSO_200M_050219_1,19600 HBL1_DMSO_200M_050219_1,19600,QLIDKVWQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19601 94.356 343.0 279060.0 25 0 61265.0 -1 0 124 580.3560831706397 1738.046420112119 3 580.6899291872978 MULTI CID FTMS 0 0 0 19593 370760.4375 1.0 0 0.0 8 3 {I|L} 1 -1 10.596 0.0 0.0 0.60965 0.0 0.0 1606.9514626920002 0.0 1606.9514626920002 0.0 1.254778746869059 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.60965 - 409 + 1 1.43 77812.7 1.0 13779 5820 19593 HBL1_DMSO_200M_050219_1,19601 HBL1_DMSO_200M_050219_1,19601, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19602 94.364 452.0 378680.0 25 0 68898.0 + 14059 IALPSLRI 8 110 441.7915717992176 881.5685906652352 2 441.7920715212822 MULTI CID FTMS 0 0 0 19593 261108.4375 0.4857029985401246 2 -0.2074432373046875 9 Unmodified _IALPSLRI_ ENSG00000198712|ENST00000361739|MT-CO2 52.268347100219714 0.1285778651304833 3 {I|L}A{I|L}PS{I|L}R{I|L} 8 0 + 73.601 0.0 0.0 8.3489 8.3489 90.633 0.0 0.0 0.0 45.36928818675939 11.61359110675761 11.61359110675761 6.397065965837001 0 0.9247425010840048 1.6989700043360187 0.3807196863200844 0.7742275032520141 + + {I|L}A{I|L}PS{I|L}R{I|L};{I|L}A{I|L}{I|L}[PS]R{I|L} 8.3489;7.6232 +;- + 242 + 1 1.43 138759.5 1.0 13780 5820 19593 HBL1_DMSO_200M_050219_1,19602 HBL1_DMSO_200M_050219_1,19602,IALPSLRI False True IALPSLRI 94.363861 441.792071521282 8746604.0 19593.0 ENSG00000198712|ENST00000361739|MT-CO2 0.7635826567808787 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19603 94.37 341.0 496140.0 25 0 44383.0 + 4517 DAYLPLRL 8 151 480.7794978968272 959.5444428604544 2 480.7802307009697 MULTI CID FTMS 0 0 0 19593 240509.703125 0.0057824440235117 18 -2.093955993652344 10 Unmodified _DAYLPLRL_ ENSG00000062822|ENST00000440232|POLD1 42.09456458481378 0.1992492688217789 3 [VS]{M(Oxidation (M))|F}E{I|L}PR{I|L} 8 5 + 62.049 0.0 0.0 6.4665 6.4665 87.934 0.0 0.0 0.0 31.719289405465524 24.252961752788387 24.252961752788387 8.534087492996392 0 0.5 1.6989700043360187 0.0 0.9247425010840048 [VS]{M(Oxidation (M))|F}E{I|L}PR{I|L};[VS]{M(Oxidation (M))|F}{I|L}EPR{I|L};[VS]{I|L}{M(Oxidation (M))|F}EPR{I|L};[VS]{M(Oxidation (M))|F}{I|L}{I|L}TPA{I|L};[VS]{M(Oxidation (M))|F}{I|L}{I|L}[PA]T{I|L};[VS]{M(Oxidation (M))|F}P{[QN]|[E{I|L}]|[KN]}R{I|L};[VS][{I|L}T]{I|L}{M(Oxidation (M))|F}[PA]{I|L};[VS]{I|L}{M(Oxidation (M))|F}{I|L}[PA]T{I|L};[VS]{I|L}{M(Oxidation (M))|F}{I|L}[TP]A{I|L};[VS]{M(Oxidation (M))|F}{I|L}{I|L}T{I|L}[PA] 6.4665;5.5771;4.874;3.6954;3.5418;3.4298;3.3206;3.1776;3.1032;3.0734 -;-;-;-;-;-;-;-;-;- 607 + 1 1.43 133130.0 1.0 13781 5820 19593 HBL1_DMSO_200M_050219_1,19603 HBL1_DMSO_200M_050219_1,19603,DAYLPLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19604 94.378 475.0 362140.0 25 0 29336.0 + 9653 FLPDPSALQNL 11 170 607.8245097319684 1213.6344665307367 2 607.8248168826103 MULTI CID FTMS 0 0 0 19593 231408.03125 0.1210707410649499 6 -0.75091552734375 11 Unmodified _FLPDPSALQNL_ ENSG00000158019|ENST00000379624|BABAM2;nc|ENSG00000158019|Q9NXR7-1|BABAM2;nc|ENSG00000158019|Q9NXR7-3|BABAM2;nc|ENSG00000158019|Q9NXR7-4|BABAM2 61.60191391372663 0.0626439052904852 3 [DP]PSA{I|L}QD{I|L}{M(Oxidation (M))|F} 10 4 44.262 0.0 0.0 3.6471 0.0 0.0 0.0 127.08951959153671 127.08951959153671 16.44487640592792 0.0 0.0 0.0 0 0.1237125054200235 0.958607314841775 1.2249073637206092 0.0 [DP]PSA{I|L}QD{I|L}{M(Oxidation (M))|F} 3.6471 - 9004 1 1.43 129121.1 1.0 13782 5820 19593 HBL1_DMSO_200M_050219_1,19604 HBL1_DMSO_200M_050219_1,19604,FLPDPSALQNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19605 94.382 165.0 488190.0 25 0 92227.0 + -1 KMQTDAILI 9 132 524.7874567369548 0 524.7877075076103 PEAK CID FTMS 0 0 0 19593 225730.4375 0.6082659423655125 2 -0.2074432373046875 12 Oxidation (M) _KM(Oxidation (M))QTDAILI_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN 21.74664581756881 0.185237546287679 3 {I|L}E 2 -1 17.206 0.0 0.0 1.6425 0.0 0.0 227.1143289018408 575.2937718969206 802.4081007987613 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6237125054200234 0.0 {I|L}E 1.6425 - 301 + 1 1.43 67125.6 1.0 13783 5820 19593 HBL1_DMSO_200M_050219_1,19605 HBL1_DMSO_200M_050219_1,19605,KMQTDAILI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19606 94.389 415.0 385300.0 25 0 27928.0 + 29069 QELENYIRSI 10 163 632.8309354192437 1263.6473179052873 2 632.8311645388603 MULTI CID FTMS 0 0 0 19593 202511.625 0.6255515010733191 -2 0.22320556640625 13 Unmodified _QELENYIRSI_ REV__L1PB1_dup10052|chr12:47254957-47257203:+|1.548341044108226|0.3758641288713036|2.04|48.0|63|3|sense 49.55428908609986 0.0827668555218455 3 S{I|L}GK{I|L}{[WN]|[YH]}S{I|L} 9 -1 53.189 0.0 0.0 4.2092 0.0 0.0 247.0833330159458 0.0 247.0833330159458 0.0 25.432481409092546 0.0 0.0 0 0.3252574989159953 0.0 1.0629529932484498 0.8494850021680094 S{I|L}GK{I|L}{[WN]|[YH]}S{I|L} 4.2092 - 4229 + 1 1.43 126797.6 1.0 13784 5820 19593 HBL1_DMSO_200M_050219_1,19606 HBL1_DMSO_200M_050219_1,19606,QELENYIRSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19607 94.393 135.0 719090.0 25 0 96922.0 + 9343 FILLMNQTI 9 129 546.8093527531676 1091.604152573135 2 547.3043090701103 MULTI CID FTMS 0 0 0 19593 198778.796875 0.0888291652050148 10 -1.1654891967773438 14 Unmodified _FILLMNQTI_ REV__ENST00000493878.1_1_7:92079281-92079515:+|nuORF 16.942295170755138 0.3780752226737986 3 [NS]{I|L}{I|L}QT{I|L} 7 -1 20.922 0.0 0.0 1.9167 0.0 0.0 0.0 319.1418393850291 319.1418393850291 -4.306847249762441 0.0 -4.306847249762441 0.0 0 0.0 0.0 0.2742275032520141 0.0 [NS]{I|L}{I|L}QT{I|L} 1.9167 - 1042 + 1 1.43 78211.1 1.0 13785 5820 19593 HBL1_DMSO_200M_050219_1,19607 HBL1_DMSO_200M_050219_1,19607,FILLMNQTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19608 94.398 262.0 423130.0 25 0 42686.0 + 24788 MPIKINLI 8 134 471.2962775002167 940.5780020672336 2 471.2973205447197 MULTI CID FTMS 0 0 0 19593 194392.71875 0.004202617298491 17 -1.9124298095703125 15 Unmodified _MPIKINLI_ ENSG00000134001|ENST00000256383|EIF2S1 34.18733598223924 0.3315367612694167 3 MP{I|L} 3 5 40.652 0.0 0.0 4.322 0.0 0.0 0.0 596.3789156549436 596.3789156549436 15.24588601412914 0.0 0.0 0.0 0 0.5501648626366046 1.5228787452803376 0.0 0.0 + MP{I|L} 4.322 + + 423 + 1 1.43 88772.6 1.0 13786 5820 19593 HBL1_DMSO_200M_050219_1,19608 HBL1_DMSO_200M_050219_1,19608,MPIKINLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19609 94.401 185.0 320000.0 25 0 21092.0 + + 14184 RFPNFTNQLL 10 103 625.3351043253266 1248.655655717453 2 625.3354980349541 MULTI CID FTMS 0 0 0 19593 179582.6875 0.5464905527958845 2 -0.2074432373046875 16 Unmodified _IDHDLWPQLL_ ENSG00000168538|ENST00000334690|TRAPPC11 29.081581746732265 0.3152867722954398 3 [{I|L}A]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}TNQ{I|L}{I|L} 11 -1 + 59.702 0.0 0.0 4.7813 4.7813 81.857 0.0 0.0 0.0 8.399704756080013 15.552722742830303 8.399704756080013 7.7815125038364386 0 0.0 0.744727494896694 0.4247425010840047 0.3807196863200844 [{I|L}A]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}TNQ{I|L}{I|L};[{I|L}A]Q{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}TNQ{I|L}{I|L};{[TV]|[{I|L}S]}[WQ]{M(Oxidation (M))|F}TNQ{I|L}{I|L};[{I|L}A]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}TN[AG]{I|L}{I|L};[{I|L}A]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}TGGQ{I|L}{I|L};[R{M(Oxidation (M))|F}][NP]{M(Oxidation (M))|F}TNQ{I|L}{I|L};{[TV]|[{I|L}S]}V{[QS]|[NT]}{M(Oxidation (M))|F}TNQ{I|L}{I|L};[{I|L}A]G{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}TNQ{I|L}{I|L};[{I|L}A]GMAA{M(Oxidation (M))|F}TNQ{I|L}{I|L};[{I|L}A]GA{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}TNQ{I|L}{I|L} 4.7813;4.1581;4.1086;4.0503;4.0503;4.0404;3.912;3.8892;3.8589;3.7955 -;-;-;-;-;-;-;-;-;- 908 1 1.43 56917.6 1.0 13787 5820 19593 HBL1_DMSO_200M_050219_1,19609 HBL1_DMSO_200M_050219_1,19609,IDHDLWPQLL False False RFPNFTNQLL 94.401469 625.335498034954 1299663.0 19593.0 ENSG00000168538|ENST00000334690|TRAPPC11 4.920193513234456 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19610 94.405 179.0 537360.0 25 0 72726.0 + 20034 LIPAQPQLL 9 121 496.8104385243527 991.6063241155052 2 496.8105956912041 MULTI CID FTMS 0 0 0 19593 166942.71875 1.0 0 0.0 17 Unmodified _LIPAQPQLL_ ENSG00000105127|ENST00000269701|AKAP8;ENST00000598597.6_1_19:15465728-15479935:-|nuORF 28.486842064014134 0.1687311288560894 3 [{I|L}P]A{I|L}QPQ{I|L}{I|L} 9 2 + 35.221 0.0 0.0 3.5519 3.5519 80.467 0.0 0.0 0.0 10.409364509276038 3.4398776155670454 3.4398776155670454 9.208187539523752 0 0.6747425010840047 0.958607314841775 0.0 0.2614393726401688 [{I|L}P]A{I|L}QPQ{I|L}{I|L};[{I|L}P]A{I|L}QP[AG]{I|L}{I|L};{I|L}{I|L}[PA]QPQ{I|L}{I|L};[{I|L}P]A{I|L}[AG]PQ{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}A[{I|L}A]{I|L}H{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}A[{I|L}A]H{I|L}{I|L};[QP]Q{I|L}[PA]{I|L}{I|L}{I|L};{I|L}{I|L}[PA]QP[AG]{I|L}{I|L};[{I|L}P]AGQ[PA]{I|L}{I|L}{I|L};[{I|L}P]A{I|L}[AG]P[AG]{I|L}{I|L} 3.5519;2.6233;2.4248;2.3597;2.296;2.1931;1.8704;1.4962;1.4741;1.4354 -;-;+;-;-;-;-;-;-;- + 620 1 1.43 77976.1 1.0 13788 5820 19593 HBL1_DMSO_200M_050219_1,19610 HBL1_DMSO_200M_050219_1,19610,LIPAQPQLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19611 94.409 214.0 463410.0 25 0 35115.0 + 17172 KLIQLQFEV 9 124 559.3349136485486 1116.6552743638972 2 559.3345214724541 MULTI CID FTMS 0 0 0 19593 148304.953125 0.4546526525101485 -2 0.22320556640625 18 Unmodified _KLIQLQFEV_ ENST00000393179.8_1_12:89885842-89919131:-|nuORF 78.14939416004806 0.0179651292570206 3 [Q{I|L}]{I|L}K{I|L}Q{M(Oxidation (M))|F}EV 9 2 + 80.397 0.0 0.0 7.1998 7.1998 89.768 0.0 0.0 0.0 8.12356426685868 16.478174818886366 8.12356426685868 8.12356426685868 0 0.9436726795685342 0.7695510786217261 0.0 1.8193415193665468 [Q{I|L}]{I|L}K{I|L}Q{M(Oxidation (M))|F}EV;[AG]{I|L}{I|L}K{I|L}Q{M(Oxidation (M))|F}EV;[Q{I|L}]{I|L}K{I|L}[AG]{M(Oxidation (M))|F}EV;[Q{I|L}]{I|L}{I|L}KQ{M(Oxidation (M))|F}EV;{I|L}{I|L}KQ{I|L}Q{M(Oxidation (M))|F}EV;[AG]{I|L}{I|L}K{I|L}[AG]{M(Oxidation (M))|F}EV;{I|L}{I|L}QK{I|L}Q{M(Oxidation (M))|F}EV;[AG]{I|L}{I|L}{I|L}KQ{M(Oxidation (M))|F}EV;[Q{I|L}]{I|L}{I|L}K[AG]{M(Oxidation (M))|F}EV;{I|L}{I|L}K[AG]{I|L}Q{M(Oxidation (M))|F}EV 7.1998;6.4724;6.3752;6.1226;5.9146;5.6516;5.645;5.3951;5.298;5.09 -;-;-;-;-;-;-;-;-;- 557 1 1.43 79769.1 1.0 13789 5820 19593 HBL1_DMSO_200M_050219_1,19611 HBL1_DMSO_200M_050219_1,19611,KLIQLQFEV True True KLIQLQFEV 94.409011 559.334521472454 2552481.75 19593.0 ENST00000393179.8_1_12:89885842-89919131:-|nuORF 5.600711504618327 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19612 94.417 451.0 170170.0 25 0 25873.0 -1 0 108 646.9813318835797 1937.922166250939 3 647.3166381716728 MULTI CID FTMS 0 0 0 19593 144125.03125 1.0 0 0.0 19 3 [NP]N{I|L}{I|L}[QA][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]D{I|L} 11 -1 35.925 0.0 0.0 1.8538 0.0 0.0 0.0 649.3276587648639 649.3276587648639 1.660241592736725 0.0 0.0 0.0 0 0.0 0.638272163982407 0.3807196863200844 1.079689690656103 [NP]N{I|L}{I|L}[QA][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]D{I|L} 1.8538 - 569 1 1.43 67304.5 1.0 13790 5820 19593 HBL1_DMSO_200M_050219_1,19612 HBL1_DMSO_200M_050219_1,19612, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19613 94.431 800.0 131030.0 25 0 1787.5 -1 0 98 1176.3032835584393 0 1176.554003894329 PEAK CID FTMS 0 0 0 19593 46020.15234375 0.9935602042889412 -2 0.22320556640625 20 3 W 1 -1 0.71334 0.0 0.0 0.030347 0.0 0.0 1195.013719361216 966.4651259608185 2161.4788453220344 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.030347 - 7 + 1 1.43 63524.8 0.6299999952316284 13791 5820 19593 HBL1_DMSO_200M_050219_1,19613 HBL1_DMSO_200M_050219_1,19613, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19615 94.436 29.0 2236300.0 25 0 420830.0 + 4666 DAYVLPKLYV 10 73 590.8342767634228 1179.6540005936456 2 590.8347656130791 MULTI CID FTMS 0 0 0 19614 1679675.25 0.0292806523107947 7 -0.8641433715820312 1 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 38.17557092003332 0.1768326257063233 3 {[DA]|[EG]}YV 4 6 35.662 0.0 0.0 3.0231 0.0 0.0 0.0 728.4346762130393 728.4346762130393 -1.4536501951208436 0.0 -1.4536501951208436 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YV 3.0231 + + 228 1 1.467 50450.2 1.0 13792 5821 19614 HBL1_DMSO_200M_050219_1,19615 HBL1_DMSO_200M_050219_1,19615,DAYVLPKLYV False True DAYVLPKLYV 94.435611 590.834765613079 2655030400.0 19614.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 6.5677487055460615 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19616 94.437 25.0 4028600.0 25 0 754490.0 + 13275 HIPDVITYL 9 75 535.7982164087542 1069.5818798843084 2 535.7979614138603 MULTI CID FTMS 0 0 0 19614 2215041.5 0.5321526812334828 3 -0.3484268188476562 2 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 48.345845343767074 0.0439967357579942 3 [H{I|L}][DP]V{I|L}TY{I|L} 9 0 + 66.193 0.0 0.0 6.1887 6.1887 80.404 0.0 0.0 0.0 2.498774732165998 16.478174818886373 2.498774732165998 2.498774732165998 0 1.1861818737241734 1.5228787452803376 0.5 0.0 + + [H{I|L}][DP]V{I|L}TY{I|L};[VP]D{I|L}H{I|L}TY{I|L};[H{I|L}][DP]VT{I|L}Y{I|L};[DP]V{I|L}H{I|L}TY{I|L};[VP]D{I|L}TH{I|L}Y{I|L};[VP]D{I|L}HT{I|L}Y{I|L};[DP]V{I|L}TH{I|L}Y{I|L};[DP]V{I|L}HT{I|L}Y{I|L};[VP]DT{I|L}H{I|L}Y{I|L};[DP]VT{I|L}H{I|L}Y{I|L} 6.1887;5.9551;5.8554;5.7477;5.6432;5.6218;5.4358;5.4144;5.1601;4.9527 +;-;-;-;-;-;-;-;-;- + 577 1 1.467 83186.6 1.0 13793 5821 19614 HBL1_DMSO_200M_050219_1,19616 HBL1_DMSO_200M_050219_1,19616,HIPDVITYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19617 94.438 47.0 2316800.0 25 0 349620.0 + 20422 LLIENVASL 9 108 486.29224058057 970.56992822794 2 486.2925292849541 MULTI CID FTMS 0 0 0 19614 1421953.625 0.0657430602053155 4 -0.4720993041992187 3 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 64.23631603340823 0.0237365939569086 3 {I|L}{I|L}E{I|L}NGS{I|L}{I|L} 9 5 + 46.78 0.0 0.0 4.8199 4.8199 73.357 0.0 0.0 0.0 4.520534381044499 7.575156255085389 4.520534381044499 0.9691001300805624 0 0.3182503180159344 1.6989700043360187 0.0 0.6307196863200843 {I|L}{I|L}E{I|L}NGS{I|L}{I|L};{I|L}{I|L}{I|L}ENGS{I|L}{I|L};{I|L}{I|L}EN{I|L}GS{I|L}{I|L};{I|L}{I|L}[DN]{I|L}AS{I|L}{I|L};{I|L}{I|L}ENVAS{I|L}{I|L};{I|L}{I|L}[DN]A{I|L}S{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}{I|L}AS{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V{I|L}AS{I|L}{I|L};{I|L}{I|L}ENG{I|L}S{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}NV{I|L}AS{I|L}{I|L} 4.8199;4.72;4.6911;4.6293;4.4585;4.3907;4.3541;4.272;4.2199;4.1214 -;-;-;-;-;-;-;-;-;- 2011 1 1.467 90196.3 1.0 13794 5821 19614 HBL1_DMSO_200M_050219_1,19617 HBL1_DMSO_200M_050219_1,19617,LLIENVASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19618 94.439 54.0 2213300.0 25 0 531260.0 + 13591 HPLVILNI 8 105 459.7920439438144 917.5695349544288 2 459.7923156619072 MULTI CID FTMS 0 0 0 19614 1245653.75 0.0672180084470007 4 -0.4720993041992187 4 Unmodified _HPLVILNI_ ENSG00000168090|ENST00000303904|COPS6;ENST00000465027.1_1_7:99686595-99687052:+|nuORF;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 45.7499826716795 0.1592378023510922 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L} 8 0 + 73.409 0.0 0.0 8.0004 8.0004 93.767 0.0 0.0 0.0 25.696443055739664 55.98644688804811 25.696443055739664 9.262137858390815 0 0.8494850021680094 0.0 2.1549471895720984 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}GG{I|L};[{I|L}P]VH{I|L}{I|L}N{I|L};[{I|L}P]HV{I|L}{I|L}N{I|L};[H{I|L}]PV{I|L}{I|L}N{I|L};[{I|L}V]PH{I|L}{I|L}N{I|L};[{I|L}P]V{I|L}H{I|L}N{I|L};[{I|L}V]P{I|L}H{I|L}N{I|L};[{I|L}V]{I|L}PH{I|L}N{I|L};{I|L}{I|L}VPH{I|L}N{I|L} 8.0004;6.991;4.6119;4.6119;4.562;4.3701;4.2838;4.042;3.714;3.6834 +;-;-;-;-;-;-;-;-;- + 265 1 1.467 96092.9 1.0 13795 5821 19614 HBL1_DMSO_200M_050219_1,19618 HBL1_DMSO_200M_050219_1,19618,HPLVILNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19619 94.441 49.0 1663000.0 25 0 143400.0 + -1 TQLTRKMETL 10 104 618.8337775397009 1235.6530021462015 2 618.8340331912041 MULTI CID FTMS 0 0 0 19614 1000068.0 0.5006536527678601 1 -0.1061935424804687 5 Oxidation (M) _TQLTRKM(Oxidation (M))ETL_ REV__CON__Q7Z3Y8;REV__CON__Q7Z3Z0;REV__ENSG00000204897|ENST00000312150|KRT25 26.268140514670165 0.3785003716575977 3 [QT][NP]S{I|L}S{I|L}GK 10 -1 37.077 0.0 0.0 3.0006 0.0 0.0 0.0 207.1141604059204 207.1141604059204 10.167277228195797 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.1861818737241734 0.3494850021680094 [QT][NP]S{I|L}S{I|L}GK 3.0006 - 954 + 1 1.467 63945.7 1.0 13796 5821 19614 HBL1_DMSO_200M_050219_1,19619 HBL1_DMSO_200M_050219_1,19619,TQLTRKMETL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19620 94.443 100.0 1157700.0 25 0 97064.0 + 5647 DPFAFIHKI 9 117 544.3002364449206 1086.5859199566412 2 544.3002807497978 MULTI CID FTMS 0 0 0 19614 508147.40625 0.0336321494577594 7 -0.8641433715820312 6 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 69.10491478415734 0.0214449631113747 3 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L} 9 0 + 97.812 0.0 0.0 9.0018 9.0018 89.311 0.0 0.0 0.0 27.800084529637985 4.336555609385712 4.336555609385712 4.336555609385712 0 2.004432191740108 2.0 0.0 0.2396518287104437 + + DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L};DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H{I|L}K;{I|L}MDA{M(Oxidation (M))|F}{I|L}HK{I|L};{I|L}MDA{M(Oxidation (M))|F}{I|L}H{I|L}K;DP{M(Oxidation (M))|F}{I|L}[KG][WP]K;DY[W{I|L}]{I|L}HK{I|L};DY[W{I|L}]{I|L}H{I|L}K;DYV{I|L}KA[HN]K;DYV{I|L}AK[HN]K;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG][KG]{I|L}{M(Oxidation (M))|F}{[HG]|PP} 9.0018;8.6027;6.4433;6.0442;3.8679;3.5738;3.1747;2.6941;2.6941;2.244 +;-;-;-;-;-;-;-;-;- + 1419 + 1 1.467 95641.8 1.0 13797 5821 19614 HBL1_DMSO_200M_050219_1,19620 HBL1_DMSO_200M_050219_1,19620,DPFAFIHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19621 94.445 85.0 464460.0 25 0 124750.0 -1 0 59 574.679674123364 1721.0171929702915 3 574.6799194216728 MULTI CID FTMS 0 0 0 19614 499041.125 0.4722943296345119 2 -0.2274093627929687 7 3 EE{I|L} 3 -1 16.198 0.0 0.0 0.94118 0.0 0.0 703.485223831423 643.3440035455686 1346.8292273769916 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EE{I|L} 0.94118 - 16 + 1 1.467 40390.3 1.0 13798 5821 19614 HBL1_DMSO_200M_050219_1,19621 HBL1_DMSO_200M_050219_1,19621, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19622 94.448 161.0 724740.0 25 0 165780.0 + 4930 DGLTVHLVI 9 114 483.7845946902921 965.5546364473844 2 483.7848083376884 MULTI CID FTMS 0 0 0 19614 474550.375 0.173661693528614 3 -0.3484268188476562 8 Unmodified _DGLTVHLVI_ ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000175520|ENST00000311659|UBQLN3;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000472638.1_1_1:156020124-156021603:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;nc|ENSG00000160803|Q9NRR5-2|UBQLN4 85.35673624503755 0.0162188719545379 3 [H{I|L}]S{I|L}[DG]{I|L}V{I|L} 9 6 + 67.514 0.0 0.0 6.9922 6.9922 81.03 0.0 0.0 0.0 3.897934117716204 8.507812826068196 3.897934117716204 1.3601701108756856 0 0.7134679910804405 1.0 0.8494850021680094 0.0 [H{I|L}]S{I|L}[DG]{I|L}V{I|L};[H{I|L}]S{I|L}V{[DA]|[EG]}V{I|L};[H{I|L}]VT[DG]{I|L}V{I|L};[DG]{I|L}TVH{I|L}V{I|L};[H{I|L}]VTV{[DA]|[EG]}V{I|L};[H{I|L}]S{I|L}{I|L}[DG]V{I|L};{[TV]|[{I|L}S]}H{I|L}[DG]{I|L}V{I|L};[HV]T{I|L}[DG]{I|L}V{I|L};[H{I|L}]S{I|L}V{I|L}[DG]{I|L};{[TV]|[{I|L}S]}H{I|L}V{[DA]|[EG]}V{I|L} 6.9922;6.8514;6.6805;6.5885;6.5396;5.8284;5.7565;5.6448;5.6183;5.6157 -;-;-;+;-;-;-;-;-;- + 1231 1 1.467 93081.1 1.0 13799 5821 19614 HBL1_DMSO_200M_050219_1,19622 HBL1_DMSO_200M_050219_1,19622,DGLTVHLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19623 94.451 119.0 1110400.0 25 0 97302.0 + 16367 IYPVNAISF 9 130 512.2791580445313 1022.5437631558626 2 512.2794067263603 MULTI CID FTMS 0 0 0 19614 307395.5 0.0314859238242539 9 -1.064239501953125 9 Unmodified _IYPVNAISF_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 38.15118350030904 0.0856056900103839 3 [VP]NA{I|L}Y 6 4 37.36 0.0 0.0 3.6537 0.0 0.0 0.0 362.1695941510947 362.1695941510947 13.160116073527028 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.8388903526330403 [VP]NA{I|L}Y 3.6537 - 1227 1 1.467 107463.2 1.0 13800 5821 19614 HBL1_DMSO_200M_050219_1,19623 HBL1_DMSO_200M_050219_1,19623,IYPVNAISF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19624 94.455 237.0 532130.0 25 0 41162.0 + 5603 DNSLNIHPISL 11 135 611.8263440949961 0 611.8259155154228 PEAK CID FTMS 0 0 0 19614 258260.796875 0.3107793391221212 3 -0.3484268188476562 10 Unmodified _DNSLNIHPISL_ REV__ENSG00000168078|ENST00000301905|PBK;REV__nc|ENSG00000168078|Q96KB5-2|PBK 32.037481411007896 0.2076870257865254 3 {I|L}SQS{I|L}G{I|L}K 8 -1 24.358 0.0 0.0 1.9938 0.0 0.0 115.99113166926676 276.1361178033813 392.127249472648 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6237125054200234 0.5994850021680094 {I|L}SQS{I|L}G{I|L}K 1.9938 - 913 + 1 1.467 96677.4 1.0 13801 5821 19614 HBL1_DMSO_200M_050219_1,19624 HBL1_DMSO_200M_050219_1,19624,DNSLNIHPISL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19625 94.458 152.0 798950.0 25 0 82348.0 + 15423 HQIDLIVQL 9 122 539.317708364079 1076.6208637949578 2 539.8166381716728 MULTI CID FTMS 0 0 0 19614 229261.390625 0.0502795537250637 -4 0.5113983154296875 11 Unmodified _IPPNIPSVQL_ nc|ENSG00000185324|Q15131-2|CDK10;ENSG00000185324|ENST00000353379|CDK10;ENST00000472018.5_1_16:89760470-89762097:+|nuORF;nc|ENSG00000185324|Q15131-3|CDK10;nc|ENSG00000185324|Q15131-4|CDK10;nc|ENSG00000185324|Q15131-7|CDK10;ENST00000505733.5_1_16:89758861-89762180:+|nuORF 21.74664581756881 0.480091245866545 3 [{I|L}A]GHD{I|L}{I|L}VQ 9 7 69.601 0.0 0.0 6.4647 0.0 0.0 0.0 127.0831190041953 127.0831190041953 45.10356686740956 0.0 0.0 0.0 0 0.0 2.0 0.6747425010840047 0.0 [{I|L}A]GHD{I|L}{I|L}VQ 6.4647 - 1171 1 1.467 103159.0 1.0 13802 5821 19614 HBL1_DMSO_200M_050219_1,19625 HBL1_DMSO_200M_050219_1,19625,IPPNIPSVQL False False HQIDLIVQL 94.457994 539.816638171673 37784428.0 19614.0 nc|ENSG00000185324|Q15131-2|CDK10;;ENSG00000185324|ENST00000353379|CDK10;;ENST00000472018.5_1_16:89760470-89762097:+|nuORF;;nc|ENSG00000185324|Q15131-3|CDK10;;nc|ENSG00000185324|Q15131-4|CDK10;;nc|ENSG00000185324|Q15131-7|CDK10;;ENST00000505733.5_1_16:89758861-89762180:+|nuORF 5.688414732615153 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19626 94.472 800.0 337170.0 25 0 36828.0 + 864 AEVDVNQKLLL 11 211 621.3578322744459 1240.7011116156916 2 621.3592407107353 MULTI CID FTMS 0 0 0 19614 178708.4375 0.0015754839046219 23 -2.703887939453125 12 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 61.60191391372663 0.0626439052904852 3 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}{I|L} 12 -1 + 117.97 0.0 0.0 9.508 9.508 93.7 0.0 0.0 0.0 11.021052209143178 13.601514477826385 11.021052209143178 8.882353118286233 0 3.661089237444783 1.6989700043360187 1.3987488337374077 0.5866968715561641 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}E{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}GNK{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVANK{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DG{I|L}NK{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVAGGK{I|L}G{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}{I|L}AVDEG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}E{I|L}G{I|L}{I|L} 9.508;8.7921;8.7843;8.7073;8.6197;8.5786;8.564;8.3767;8.3433;8.166 -;-;-;-;-;-;-;-;-;- 169460 1 1.467 194571.4 0.7099999785423279 13803 5821 19614 HBL1_DMSO_200M_050219_1,19626 HBL1_DMSO_200M_050219_1,19626,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19627 94.486 800.0 265980.0 25 0 13145.0 + 44582 YPFINSRIITV 11 177 661.8768240194503 1321.7390951057005 2 662.3777953982353 MULTI CID FTMS 0 0 0 19614 170260.921875 0.0807117642471716 4 -0.4720993041992187 13 Unmodified _YPFINSRIITV_ ENSG00000037474|ENST00000264670|NSUN2;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 49.52724829834842 0.1202481389936634 3 YP{M(Oxidation (M))|F}{I|L}N 5 6 47.109 0.0 0.0 3.5642 0.0 0.0 0.0 684.4054133259052 684.4054133259052 0.387414901766121 0.0 0.0 0.0 0 1.3182503180159344 1.5228787452803376 0.0 0.25 + YP{M(Oxidation (M))|F}{I|L}N 3.5642 + + 4627 + 1 1.467 157235.4 0.699999988079071 13804 5821 19614 HBL1_DMSO_200M_050219_1,19627 HBL1_DMSO_200M_050219_1,19627,YPFINSRIITV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19628 94.491 266.0 1001100.0 25 0 90089.0 -1 TIICILPSL 9 182 515.3051384627173 1028.5957239922343 2 515.3069335818291 MULTI CID FTMS 0 0 0 19614 130728.2578125 0.6018849657466323 -1 0.1012496948242187 14 Carbamidomethyl (C) _TIIC(Carbamidomethyl (C))ILPSL_ nc|ENSG00000089101|Q8NHU2-6|CFAP61 64.23631603340823 0.0237365939569086 3 [{I|L}T]TRE{I|L}PS{I|L} 9 -1 + 58.997 0.0 0.0 5.7357 5.7357 83.818 0.0 0.0 0.0 2.7627079967680146 25.55007791865968 2.7627079967680146 6.305519299503288 0 0.6435078169319297 1.0457574905606752 1.415037804240591 0.2302046884880938 [{I|L}T]TRE{I|L}PS{I|L};[{I|L}T]T{I|L}SG{I|L}[DP]{I|L};[PS]{I|L}[R{M(Oxidation (M))|F}]{I|L}PS{I|L};[{I|L}T]T{I|L}ERPS{I|L};[{I|L}T]T{I|L}SR[EP]{I|L};[{I|L}T]TREP{[TV]|[{I|L}S]}{I|L};[{I|L}T]T{I|L}S[TP]PS{I|L};[{I|L}P]S[R{M(Oxidation (M))|F}]{I|L}PS{I|L};[{I|L}V]KME{I|L}PS{I|L};[{I|L}T]TRT{I|L}[DP]{I|L} 5.7357;5.1226;5.0326;4.7305;4.7263;4.7095;4.3793;4.2516;4.1962;4.0579 -;-;-;-;-;-;-;-;-;- 4456 1 1.467 212023.9 1.0 13805 5821 19614 HBL1_DMSO_200M_050219_1,19628 HBL1_DMSO_200M_050219_1,19628,TIICILPSL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 19629 94.5 539.0 373980.0 25 0 25107.0 + 37215 TIILPYPGATL 11 183 579.8420521051584 1157.6695512771166 2 579.3347045779228 MULTI CID FTMS 0 0 0 19614 146878.828125 0.1654260913085989 8 -1.0119857788085938 15 Unmodified _TIILPYPGATL_ REV__ENSG00000154265|ENST00000392676|ABCA5;REV__nc|ENSG00000154265|Q8WWZ7-2|ABCA5 27.628801355627647 0.4434699450731472 3 V{M(Oxidation (M))|F}PG{I|L}{I|L}ERV 9 -1 41.953 0.0 0.0 3.6239 0.0 0.0 129.07660801715411 0.0 129.07660801715411 0.0 17.106465236750743 0.0 0.0 0 0.1505149978319906 0.0 0.3807196863200844 0.3054621874040891 V{M(Oxidation (M))|F}PG{I|L}{I|L}ERV 3.6239 - 1529 + 1 1.467 155876.2 1.0 13806 5821 19614 HBL1_DMSO_200M_050219_1,19629 HBL1_DMSO_200M_050219_1,19629,TIILPYPGATL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19630 94.51 488.0 189860.0 25 0 18039.0 + 10555 FVFDRMFTNP 10 117 637.3048334895079 1272.5951140458158 2 637.8070556521416 MULTI CID FTMS 0 0 0 19614 127337.78125 0.9256308754050392 -1 0.1012496948242187 16 Unmodified _FVFDRMFTNP_ ENSG00000137200|ENST00000373451|CMTR1 28.49450938151212 0.328477364964909 3 {I|L}DT 3 8 36.374 0.0 0.0 2.8583 0.0 0.0 0.0 940.4241427057248 940.4241427057248 6.781826232713346 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.75 0.0 {I|L}DT 2.8583 - 493 + 1 1.467 76657.0 1.0 13807 5821 19614 HBL1_DMSO_200M_050219_1,19630 HBL1_DMSO_200M_050219_1,19630,FVFDRMFTNP False True FVFDRMFTNP 94.509894 637.807055652142 1417585.25 19614.0 ENSG00000137200|ENST00000373451|CMTR1 6.449765841166179 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19631 94.524 800.0 84669.0 25 0 8173.0 + 3509 CRPCIDKVH 9 111 1070.5230852705402 1069.5158088039402 1 1073.595751941204 MULTI CID FTMS 0 0 0 19614 73120.5078125 0.2125836009113673 3 -0.3484268188476562 17 Unmodified _CRPCIDKVH_ REV__ENST00000296220.5_1_3:125313783-125313900:-|nuORF 10.823927491677226 0.5436922275383211 3 [EP]AVT{M(Oxidation (M))|F} 6 -1 14.174 0.0 0.0 1.3253 0.0 0.0 0.0 422.191992235834 422.191992235834 4.2086398353873005 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 [EP]AVT{M(Oxidation (M))|F} 1.3253 - 565 1 1.467 48887.5 0.7699999809265137 13808 5821 19614 HBL1_DMSO_200M_050219_1,19631 HBL1_DMSO_200M_050219_1,19631,CRPCIDKVH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19632 94.527 158.0 704060.0 25 0 58711.0 17181 KLLAAILHL 9 139 496.33642538902666 990.6582978448532 2 496.3364440798759 MULTI CID FTMS 0 0 0 19614 98203.0546875 0.4901374296426127 -1 0.1012496948242187 18 Unmodified _KLLAAILHL_ ENSG00000137474|ENST00000409709|MYO7A;ENSG00000169994|ENST00000409816|MYO7B;nc|ENSG00000137474|Q13402-2|MYO7A;nc|ENSG00000137474|Q13402-3|MYO7A;nc|ENSG00000137474|Q13402-4|MYO7A;nc|ENSG00000137474|Q13402-6|MYO7A;nc|ENSG00000137474|Q13402-7|MYO7A;nc|ENSG00000137474|Q13402-8|MYO7A;nc|ENSG00000169994|Q6PIF6-2|MYO7B;nc|ENSG00000169994|Q6PIF6|MYO7B 56.541270873467816 0.0279970378729908 3 K{I|L}{I|L}AA{I|L}{I|L}H{I|L} 9 0 + 76.271 0.0 0.0 7.699 7.699 94.662 0.0 0.0 0.0 45.205488096871846 12.587418566968154 12.587418566968154 14.247425010840049 0 1.4489700043360187 0.619788758288394 0.0 0.0 + + K{I|L}{I|L}AA{I|L}{I|L}H{I|L};K{I|L}{I|L}AA{I|L}H{I|L}{I|L};{I|L}{I|L}KAA{I|L}{I|L}H{I|L};{I|L}{I|L}KAA{I|L}H{I|L}{I|L};{I|L}{I|L}AA{I|L}K{I|L}H{I|L};[K{I|L}]{I|L}V[VG]{I|L}H{I|L} 7.699;6.2608;5.501;4.0628;2.2319;0.97971 +;-;-;-;-;- + 589 + 1 1.467 89079.4 1.0 13809 5821 19614 HBL1_DMSO_200M_050219_1,19632 HBL1_DMSO_200M_050219_1,19632,KLLAAILHL True True KILAAILHL 94.526877 496.336444079876 4302939.0 19614.0 ENSG00000176658|ENST00000318217|MYO1D;;nc|ENSG00000128833|Q9NQX4-2|MYO5C;;ENST00000560809.5_1_15:52548900-52557395:-|nuORF;;ENSG00000128833|ENST00000261839|MYO5C;;ENST00000558902.5_1_15:52548900-52571163:-|nuORF 4.37977409362793 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19633 94.529 79.0 1106100.0 25 0 68251.0 -1 LHCGRKHVSI 10 117 603.8279904442614 1205.6414279553228 2 603.8294555544853 MULTI CID FTMS 0 0 0 19614 99775.2265625 0.1422820771424861 -1 0.1012496948242187 19 Carbamidomethyl (C) _LHC(Carbamidomethyl (C))GRKHVSI_ ENST00000317025.12_1_8:38162175-38162253:-|nuORF 13.90604991867851 0.6142120002215601 3 [WE][{I|L}T]QEWS 8 -1 45.481 0.0 0.0 3.7724 0.0 0.0 0.0 143.1425015239353 143.1425015239353 16.135915699699673 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.7059771852360797 0.3807196863200844 [WE][{I|L}T]QEWS 3.7724 - 899 1 1.467 67046.6 1.0 13810 5821 19614 HBL1_DMSO_200M_050219_1,19633 HBL1_DMSO_200M_050219_1,19633,LHCGRKHVSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19634 94.537 411.0 344560.0 25 0 24278.0 + 43874 YFPDYSIGNL 10 157 594.7810217359291 1187.5474905386582 2 594.7807494997978 MULTI CID FTMS 0 0 0 19614 89507.8046875 0.1986793380753715 -6 0.6250152587890625 20 Unmodified _YFPDYSIGNL_ ENSG00000164815|ENST00000297431|ORC5;ENST00000463152.5_1_7:103824789-103838202:-|nuORF;ENST00000485726.1_1_7:103828364-103848439:-|nuORF;nc|ENSG00000164815|O43913-2|ORC5 43.85829265575387 0.1168243637355526 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{[QS]|[NT]}{M(Oxidation (M))|F}P[{M(Oxidation (M))|F}E] 10 9 + 36.731 0.0 0.0 3.093 3.093 75.989 0.0 0.0 0.0 6.4030185638009804 0.0 0.0 6.289850105233292 0 0.8252574989159953 1.6989700043360187 0.2614393726401688 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{[QS]|[NT]}{M(Oxidation (M))|F}P[{M(Oxidation (M))|F}E];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{[QS]|[NT]}P{M(Oxidation (M))|F}[Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{M(Oxidation (M))|F}D[C(Carbamidomethyl (C))R]S{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{[QS]|[NT]}{I|L}M[Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{M(Oxidation (M))|F}D[C(Carbamidomethyl (C))R]TV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{M(Oxidation (M))|F}DT{[QS]|[NT]}S{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}PD[C(Carbamidomethyl (C))R]S{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{I|L}{[QS]|[NT]}M[Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{M(Oxidation (M))|F}DT{[QS]|[NT]}TV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{M(Oxidation (M))|F}DT[C(Carbamidomethyl (C))R]V 3.093;2.5633;2.5538;2.3813;2.3239;2.1951;2.0242;1.9692;1.9652;1.9017 -;-;-;-;-;-;-;-;-;- 1917 1 1.467 110974.4 1.0 13811 5821 19614 HBL1_DMSO_200M_050219_1,19634 HBL1_DMSO_200M_050219_1,19634,YFPDYSIGNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19636 94.543 86.0 829100.0 25 0 45781.0 + 45689 YWPTYTPMEV 10 92 643.7910168561716 1285.5674807791431 2 643.7919799685478 MULTI CID FTMS 0 0 0 19635 642934.6875 1.0 0 0.0 1 Unmodified _YWPTYTPMEV_ ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A 54.773552608820026 0.052133998764723 3 EDTPMEV 7 5 40.914 0.0 0.0 3.1825 0.0 0.0 466.21934110000944 0.0 466.21934110000944 0.0 19.57091781572258 0.0 0.0 0 0.5 0.0 1.4634679910804405 0.0 EDTPMEV 3.1825 - 1200 + 1 1.479 56406.3 1.0 13812 5822 19635 HBL1_DMSO_200M_050219_1,19636 HBL1_DMSO_200M_050219_1,19636,YWPTYTPMEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19637 94.557 800.0 232230.0 25 0 25997.0 -1 0 137 1029.9765094087563 2057.938465884313 2 1029.971850574017 MULTI CID FTMS 0 0 0 19635 87025.96875 0.063712201043525 5 -0.6176528930664062 2 3 {[QN]|[E{I|L}]|[KN]}MTA[WP]V{[MG]|[TS]}{I|L}DG{M(Oxidation (M))|F} 14 -1 44.35 0.0 0.0 2.1551 0.0 0.0 0.0 507.189695482426 507.189695482426 29.17267762670157 0.0 0.0 0.0 0 0.6861818737241735 1.154901959985743 0.0 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}MTA[WP]V{[MG]|[TS]}{I|L}DG{M(Oxidation (M))|F} 2.1551 - 2257 1 1.479 121912.5 0.8600000143051147 13813 5822 19635 HBL1_DMSO_200M_050219_1,19637 HBL1_DMSO_200M_050219_1,19637, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19638 94.558 72.0 853220.0 25 0 112500.0 + 34405 SLVEQLTMV 9 86 510.2745625487382 1018.5345721642764 2 510.2751037478447 MULTI CID FTMS 0 0 0 19635 872202.125 0.7492962746719984 -3 0.3955841064453125 3 Unmodified _SLVEQLTMV_ ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24 21.74664581756881 0.2544899275067181 3 [VP]VN{I|L}{[ET]|[MV]}[{M(Oxidation (M))|F}T] 9 6 + 27.571 0.0 0.0 2.7069 2.7069 71.71 0.0 0.0 0.0 1.791018053690692 2.560443407534628 1.791018053690692 3.060158615989227 0 0.0 0.9208187539523752 0.0 0.0 [VP]VN{I|L}{[ET]|[MV]}[{M(Oxidation (M))|F}T];{NN|[MP]|[D{I|L}]|[EV]}QPV{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T];[VP]VGG{I|L}{[ET]|[MV]}[{M(Oxidation (M))|F}T];{NN|[MP]|[D{I|L}]|[EV]}[AG]PV{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T];{[QV]|[N{I|L}]|[RA]|[KV]}EPV{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T];{NN|[MP]|[D{I|L}]|[EV]}Q{[TV]|[{I|L}S]}[VP][{M(Oxidation (M))|F}T];[VP]QEV{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T];[VP]QVV{[ET]|[MV]}[{M(Oxidation (M))|F}T];{[QV]|[N{I|L}]|[RA]|[KV]}PEV{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VPV{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T] 2.7069;2.4064;1.8028;1.5024;1.4246;1.4121;1.174;0.7708;0.73839;0.67813 -;-;-;-;-;-;-;-;-;- 293 1 1.479 53589.4 1.0 13814 5822 19635 HBL1_DMSO_200M_050219_1,19638 HBL1_DMSO_200M_050219_1,19638,SLVEQLTMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19639 94.561 107.0 637980.0 25 0 82530.0 + 18271 KVIEINPYLL 10 79 601.363453857154 1200.712354781108 2 601.3639404177666 MULTI CID FTMS 0 0 0 19635 679954.25 0.9012295320978588 -2 0.2074432373046875 4 Unmodified _KVIEINPYLL_ ENSG00000100804|ENST00000361611|PSMB5;ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000100804|P28074-2|PSMB5;nc|ENSG00000204264|P28062-2|PSMB8 51.41523569358685 0.0718446036348414 3 E{I|L}NPY{I|L}{I|L} 7 3 77.071 0.0 0.0 6.4187 0.0 0.0 340.2484303205094 0.0 340.2484303205094 0.0 46.893426046896494 0.0 0.0 0 1.5356668758921828 0.0 0.6989700043360187 0.4247425010840047 + E{I|L}NPY{I|L}{I|L} 6.4187 + + 260 1 1.479 52042.5 1.0 13815 5822 19635 HBL1_DMSO_200M_050219_1,19639 HBL1_DMSO_200M_050219_1,19639,KVIEINPYLL True True KVIEINPYLL 94.560597 601.363940417767 19218746.0 19635.0 nc|ENSG00000100804|P28074-2|PSMB5;;ENSG00000100804|ENST00000361611|PSMB5;;ENSG00000204264|ENST00000374882|PSMB8;;nc|ENSG00000204264|P28062-2|PSMB8 6.432424386342366 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19640 94.562 42.0 1716000.0 25 0 217390.0 + 35802 SVITQVFHV 9 97 515.2889255607477 1028.5632981882952 2 515.2896606326103 MULTI CID FTMS 0 0 0 19635 543592.1875 0.3025111892071627 -2 0.2074432373046875 5 Unmodified _SVITQVFHV_ ENSG00000115677|ENST00000310931|HDLBP;nc|ENSG00000115677|Q00341-2|HDLBP 54.773552608820026 0.0299037012502309 3 [VS]{I|L}TQV{M(Oxidation (M))|F}[HV] 9 0 + 77.369 0.0 0.0 7.522 7.522 89.343 0.0 0.0 0.0 16.0636965628467 6.513162828007936 6.513162828007936 6.513162828007936 0 0.75 2.0 0.75 0.3494850021680094 + + [VS]{I|L}TQV{M(Oxidation (M))|F}[HV];[VS]{I|L}T{[CP]|[EA]}{I|L}PS{I|L};[VS]{I|L}E{[RE]|[WV]}PS{I|L};[VS]{I|L}T[AG]V{M(Oxidation (M))|F}[HV];[VS]{I|L}[WD]{I|L}PS{I|L};[VS]{I|L}T{[CP]|[EA]}{I|L}T[VP];[VS][WK]QT{I|L}[PA];[VS]{I|L}E[KA]{M(Oxidation (M))|F}[HV];[VS]E{I|L}{[RE]|[WV]}PS{I|L};[VS]E{[RE]|[WV]}{I|L}PS{I|L} 7.522;6.8888;6.3516;6.287;6.2302;5.6353;5.6023;5.4807;5.4265;5.305 +;-;-;-;-;-;-;-;-;- + 1343 + 1 1.479 62584.0 1.0 13816 5822 19635 HBL1_DMSO_200M_050219_1,19640 HBL1_DMSO_200M_050219_1,19640,SVITQVFHV True True SVITQVFHV 94.561789 515.28966063261 77783120.0 19635.0 ENSG00000115677|ENST00000310931|HDLBP;;nc|ENSG00000115677|Q00341-2|HDLBP 7.019560972849528 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19641 94.565 135.0 322300.0 25 0 49521.0 22781 LQRQKRKQRYR 11 85 520.6503165267848 1558.929120180554 3 520.6501342654228 MULTI CID FTMS 0 0 0 19635 372184.5 0.9701108158942088 -3 0.3955841064453125 6 Unmodified _LQRQKRKQRYR_ ENSG00000159450|ENST00000614923|TCHH 0.4545168274142398 0.8730034954726786 3 {I|L} 1 10 11.783 0.0 0.0 0.75582 0.0 0.0 1427.8340101725446 0.0 1427.8340101725446 0.0 0.3627533357430579 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.75582 + + 74 + 1 1.479 42574.5 1.0 13817 5822 19635 HBL1_DMSO_200M_050219_1,19641 HBL1_DMSO_200M_050219_1,19641,LQRQKRKQRYR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19642 94.567 121.0 492530.0 25 0 63978.0 + 13349 HLFDAFVSV 9 68 517.7687444891915 1033.5229360451829 2 517.7689086794853 MULTI CID FTMS 0 0 0 19635 355710.8125 1.0 0 0.0 7 Unmodified _HLFDAFVSV_ ENSG00000035499|ENST00000265036|DEPDC1B;ENST00000512078.5_1_5:59893582-59984814:-|nuORF;nc|ENSG00000035499|Q8WUY9-2|DEPDC1B 50.855029805455786 0.0384952370514206 3 [VS]{M(Oxidation (M))|F}[H{I|L}]{M(Oxidation (M))|F}VSV 9 4 + 50.154 0.0 0.0 4.8527 4.8527 80.721 0.0 0.0 0.0 14.71726222832956 34.21204671777453 14.71726222832956 6.262874945799766 0 0.7742275032520141 1.3979400086720375 0.7059771852360797 0.0 [VS]{M(Oxidation (M))|F}[H{I|L}]{M(Oxidation (M))|F}VSV;[VS]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}VSV;[VS]YY{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}] 4.8527;4.2468;0.80912 -;-;- 120 1 1.479 51703.5 1.0 13818 5822 19635 HBL1_DMSO_200M_050219_1,19642 HBL1_DMSO_200M_050219_1,19642,HLFDAFVSV True True HLFDAFVSV 94.567035 517.768908679485 4058216.5 19635.0 nc|ENSG00000035499|Q8WUY9-2|DEPDC1B;;ENST00000512078.5_1_5:59893582-59984814:-|nuORF;;ENSG00000035499|ENST00000265036|DEPDC1B 7.806407610575358 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19643 94.575 464.0 459440.0 25 0 32601.0 + 31106 RLLLVGIDEV 10 174 563.8454494374433 1125.6763459416866 2 563.8456909060478 MULTI CID FTMS 0 0 0 19635 237203.328125 1.0 0 0.0 8 Unmodified _RLLLVGIDEV_ ENSG00000134262|ENST00000369569|AP4B1;ENST00000462591.1_1_1:114438325-114438970:-|nuORF;ENST00000479285.5_1_1:114438325-114438811:-|nuORF 49.55428908609986 0.0827668555218455 3 {I|L}VG{I|L}DEV 7 3 58.136 0.0 0.0 5.1645 0.0 0.0 382.2692738263688 0.0 382.2692738263688 0.0 36.78704517018284 0.0 0.0 0 1.066901560044258 0.0 0.0 0.0 + {I|L}VG{I|L}DEV 5.1645 + + 1404 1 1.479 163335.4 1.0 13819 5822 19635 HBL1_DMSO_200M_050219_1,19643 HBL1_DMSO_200M_050219_1,19643,RLLLVGIDEV True True RLLLVGIDEV 94.57526 563.845690906048 1520331.75 19635.0 ENST00000462591.1_1_1:114438325-114438970:-|nuORF;;ENSG00000134262|ENST00000369569|AP4B1;;ENST00000479285.5_1_1:114438325-114438811:-|nuORF 5.835062344868978 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19644 94.579 192.0 442940.0 25 0 18084.0 -1 IMMLGICAVL 10 124 576.7973583615745 1151.580163789949 2 577.2987548708916 MULTI CID FTMS 0 0 0 19635 205978.34375 0.6317833269113168 -3 0.3955841064453125 9 Carbamidomethyl (C),2 Oxidation (M) _IM(Oxidation (M))M(Oxidation (M))LGIC(Carbamidomethyl (C))AVL_ ENSG00000119913|ENST00000646139|TECTB 12.531546534597751 0.6372748319968624 3 [VP]Y 3 -1 21.171 0.0 0.0 1.8384 0.0 0.0 0.0 789.3722224659833 789.3722224659833 2.720340221751375 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [VP]Y 1.8384 - 352 1 1.479 67899.0 1.0 13820 5822 19635 HBL1_DMSO_200M_050219_1,19644 HBL1_DMSO_200M_050219_1,19644,IMMLGICAVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19645 94.593 800.0 240540.0 25 0 10106.0 + -1 LPCTPVLVV 9 160 940.4513485087988 1878.8881440843973 2 940.4509155154228 MULTI CID FTMS 0 0 0 19635 164437.609375 0.9930478206370372 -3 0.3955841064453125 10 ENSG00000168421|ENST00000381799|RHOH;chr4:40242846-40243178|48|30.71|0.71|5.43|+|ENST00000614836|RHOH,RHOH;chr4:40240345-40242714|47|17.98|0.34|5.71|+|ENST00000515702|RHOH,RHOH 3 [{I|L}T]M[HK]{I|L}VV 8 -1 41.093 0.0 0.0 2.1871 0.0 0.0 0.0 954.3254359147284 954.3254359147284 5.831884915682586 0.0 0.0 0.0 0 0.5 2.0 0.9049471895720984 0.0 [{I|L}T]M[HK]{I|L}VV 2.1871 - 3115 1 1.479 122918.5 0.9399999976158142 13821 5822 19635 HBL1_DMSO_200M_050219_1,19645 HBL1_DMSO_200M_050219_1,19645, False False LPCTPVLVV 94.592806 940.450915515423 5567837.0 19635.0 ENSG00000168421|ENST00000381799|RHOH;;chr4:40242846-40243178|48|30.71|0.71|5.43|+|ENST00000614836|RHOH,RHOH;;chr4:40240345-40242714|47|17.98|0.34|5.71|+|ENST00000515702|RHOH,RHOH 5.839998722076416 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19646 94.607 800.0 378870.0 25 0 57942.0 + 37551 TLIDLPGITKV 11 174 585.3613991391333 1168.7082453450664 2 585.3615600466728 MULTI CID FTMS 0 0 0 19635 134722.4375 0.4259691595308164 -3 0.3955841064453125 11 Unmodified _TLIDLPGITKV_ ENSG00000079805|ENST00000389253|DNM2;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000079805|P50570-3|DNM2;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000197959|Q9UQ16-2|DNM3;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16|DNM3 77.04852534044906 0.0119778990295177 3 [{I|L}T]{I|L}D{I|L}PG{I|L}TKV 11 0 + 91.431 0.0 0.0 7.8233 7.8233 82.084 0.0 0.0 0.0 24.87329814461444 0.7767412584546918 0.7767412584546918 0.7767412584546918 0 1.579689690656103 2.0 1.5994850021680094 0.1237125054200235 + + [{I|L}T]{I|L}D{I|L}PG{I|L}TKV;[{I|L}T]{I|L}D{I|L}PG{I|L}KS{I|L};[{I|L}T]{I|L}D{I|L}PG{I|L}KTV;[{I|L}T]{I|L}D{I|L}PG{I|L}V[KT];[{I|L}T]{I|L}D{I|L}V[PA]TKV;[{I|L}T]{I|L}D{I|L}V[PA]KS{I|L};[{I|L}T]{I|L}VEPG{I|L}TKV;[{I|L}T]{I|L}VEPG{I|L}KS{I|L};[{I|L}T]{I|L}D{I|L}V[PA]KTV;[{I|L}T]{I|L}VEPG{I|L}KTV 7.8233;7.7568;7.5861;7.057;6.9295;6.863;6.8596;6.7931;6.6923;6.6224 +;-;-;-;-;-;-;-;-;- + 5857 + 1 1.479 226621.5 0.6600000262260437 13822 5822 19635 HBL1_DMSO_200M_050219_1,19646 HBL1_DMSO_200M_050219_1,19646,TLIDLPGITKV True True TLIDLPGITKV 94.606639 585.361560046673 7485666.0 19635.0 nc|ENSG00000079805|P50570-2|DNM2;;nc|ENSG00000079805|P50570-5|DNM2;;ENSG00000079805|ENST00000389253|DNM2;;nc|ENSG00000197959|Q9UQ16-5|DNM3;;nc|ENSG00000079805|P50570|DNM2;;ENSG00000197959|ENST00000627582|DNM3;;nc|ENSG00000197959|Q9UQ16-2|DNM3;;nc|ENSG00000197959|Q9UQ16-4|DNM3;;nc|ENSG00000197959|Q9UQ16|DNM3;;nc|ENSG00000079805|P50570-3|DNM2 5.636881033579509 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19647 94.62 800.0 199830.0 25 0 14883.0 + 17379 KMFESFIESV 10 174 608.797484581431 1215.580416229662 2 608.7963744997978 MULTI CID FTMS 0 0 0 19635 150007.453125 0.8333076843556079 4 -0.5434722900390625 12 Unmodified _KMFESFIESV_ ENSG00000114302|ENST00000265563|PRKAR2A;nc|ENSG00000114302|P13861-2|PRKAR2A 53.40400417844725 0.0601721406801337 3 YAH{M(Oxidation (M))|F}ASGESV 10 6 52.366 0.0 0.0 4.3079 0.0 0.0 149.11308332126197 0.0 149.11308332126197 0.0 27.461170727127243 0.0 0.0 0 1.395701298008806 0.0 0.805462187404089 0.0 YAH{M(Oxidation (M))|F}ASGESV 4.3079 - 5420 + 1 1.479 117408.5 0.6800000071525574 13823 5822 19635 HBL1_DMSO_200M_050219_1,19647 HBL1_DMSO_200M_050219_1,19647,KMFESFIESV True True KMFESFIESV 94.620474 608.796374499798 2702431.5 19635.0 nc|ENSG00000114302|P13861-2|PRKAR2A;;ENSG00000114302|ENST00000265563|PRKAR2A 4.521810690561931 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19648 94.636 800.0 103020.0 25 0 3333.2 -1 0 145 705.4189102026448 704.4116337360448 1 706.3024169802666 MULTI CID FTMS 0 0 0 -1 0 13 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AE{I|L} 6 -1 + 20.581 0.0 0.0 2.9217 2.9217 70.188 0.0 0.0 0.0 7.816454216413309 -5.466999207850964 -5.466999207850964 2.0411998265592395 0 0.4436726795685343 0.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}E{I|L};[{I|L}A]{M(Oxidation (M))|F}{I|L}E{I|L};{I|L}{I|L}{M(Oxidation (M))|F}AE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DV]V{I|L};[{M(Oxidation (M))|F}V]VVE{I|L};[{M(Oxidation (M))|F}V]{NN|[MP]|[D{I|L}]|[EV]}V{I|L};[{I|L}P][Y{I|L}]S{I|L} 2.9217;2.6319;1.1921;1.1629;1.1309;1.0446;0.49611;0.041827 -;-;-;-;-;-;-;- 187 1 1.479 64828.7 0.6299999952316284 13824 5822 19635 HBL1_DMSO_200M_050219_1,19648 HBL1_DMSO_200M_050219_1,19648, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19649 94.644 493.0 144680.0 25 0 11285.0 -1 0 100 664.3367444048854 1989.988403814856 3 664.3374511599541 MULTI CID FTMS 0 0 0 19635 88279.765625 1.0 0 0.0 14 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}VSHHEP 9 -1 24.636 0.0 0.0 1.238 0.0 0.0 0.0 953.4788117739514 953.4788117739514 7.178054607647148 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.8807196863200843 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}VSHHEP 1.238 - 942 1 1.479 65493.6 1.0 13825 5822 19635 HBL1_DMSO_200M_050219_1,19649 HBL1_DMSO_200M_050219_1,19649, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19650 94.658 800.0 268890.0 25 0 6723.9 -1 0 138 1095.6941229278932 0 1095.589648425579 PEAK CID FTMS 0 0 0 -1 0 15 3 EDWK 4 -1 7.0088 0.0 0.0 0.32013 0.0 0.0 1445.0472901899675 183.0418642633422 1628.08915445331 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EDWK 0.32013 - 256 + 1 1.479 125564.9 0.9100000262260436 13826 5822 19635 HBL1_DMSO_200M_050219_1,19650 HBL1_DMSO_200M_050219_1,19650, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19652 94.663 7.9 15269000.0 25 0 1023600.0 + 29455 QLIDKVWQL 9 130 571.8325699763662 0 571.8326293826103 PEAK CID FTMS 0 0 0 19651 7783707.5 0.921799639840389 1 -0.1210174560546875 1 Unmodified _QLIDKVWQL_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 131.26759243768294 1.9435854781180683e-06 3 WQ{I|L}{I|L}EQ 6 6 39.312 0.0 0.0 3.4434 0.0 0.0 259.1591716644363 82.06694971256093 341.22612137699724 0.0 0.0 0.0 0.0 0 0.6549471895720984 0.0 1.173877368056628 1.305462187404089 WQ{I|L}{I|L}EQ 3.4434 - 1443 + 1 1.513 93678.9 1.0 13827 5823 19651 HBL1_DMSO_200M_050219_1,19652 HBL1_DMSO_200M_050219_1,19652,QLIDKVWQL True True QLIDKVWQL 94.662961 571.83262938261 174892512.0 19651.0 nc|ENSG00000129657|Q92503-3|SEC14L1;;nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;ENST00000587491.5_1_17:75207779-75210102:+|nuORF 5.136617342631022 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19653 94.664 54.0 1518400.0 25 0 141390.0 + 20026 MTDPIRILV 9 118 528.8060836147177 1055.5976142962354 2 529.3081542849541 MULTI CID FTMS 0 0 0 19651 664292.5625 0.152252234675508 5 -0.6367340087890625 2 Unmodified _LINKDQNLV_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 18.13498045792455 0.3457906370836843 3 [MT]D 3 8 29.423 0.0 0.0 2.7874 0.0 0.0 0.0 705.4596802964885 705.4596802964885 11.621637124434788 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8252574989159953 0.0 [MT]D 2.7874 - 454 1 1.513 69580.3 1.0 13828 5823 19651 HBL1_DMSO_200M_050219_1,19653 HBL1_DMSO_200M_050219_1,19653,LINKDQNLV False False MTDPIRILV 94.664357 529.308154284954 136207744.0 19651.0 ENSG00000141543|ENST00000649764|EIF4A3;;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 6.847966353098552 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19654 94.666 23.0 3981300.0 25 0 414100.0 + 10394 FSWEGAFQHV 10 95 604.2802549701255 1206.545957007051 2 604.2806274294853 MULTI CID FTMS 0 0 0 19651 2166870.5 0.4479310066471187 -2 0.2274093627929687 3 Unmodified _FSWEGAFQHV_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000434365.1_1_X:114938170-114938437:+|nuORF;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 57.72198328787511 0.0425618229276495 3 {M(Oxidation (M))|F}SWEGA{M(Oxidation (M))|F}Q[HV] 10 0 + 80.227 0.0 0.0 6.6493 6.6493 86.989 0.0 0.0 0.0 53.99842440838548 7.269987279362624 7.269987279362624 6.53212513775344 0 0.3494850021680094 0.0 0.4247425010840047 1.610924374808178 + + {M(Oxidation (M))|F}SWEGA{M(Oxidation (M))|F}Q[HV];{M(Oxidation (M))|F}SWEQ{M(Oxidation (M))|F}Q[HV];{M(Oxidation (M))|F}SWEGA{M(Oxidation (M))|F}[HN]{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KQ]AWWSE;{M(Oxidation (M))|F}SWEQ{M(Oxidation (M))|F}[HN]{I|L};[WE][{I|L}T]QE[VS]SE;{M(Oxidation (M))|F}S[VS]WA{M(Oxidation (M))|F}Q[HV];{M(Oxidation (M))|F}S{[DA]|[EG]}WA{M(Oxidation (M))|F}Q[HV];[WE][{I|L}T]AGE[VS]SE;{M(Oxidation (M))|F}SWEQ{M(Oxidation (M))|F}[AG][HV] 6.6493;6.1079;5.6745;5.5554;5.1331;4.8008;4.7395;4.7395;4.6782;4.6771 +;-;-;-;-;-;-;-;-;- + 1995 + 1 1.513 71916.8 1.0 13829 5823 19651 HBL1_DMSO_200M_050219_1,19654 HBL1_DMSO_200M_050219_1,19654,FSWEGAFQHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19655 94.667 77.0 1046700.0 25 0 160260.0 + 17400 KMPDDVWLV 9 96 551.7836413920712 1101.5527298509423 2 551.7839843630791 MULTI CID FTMS 0 0 0 19651 801035.625 0.4741662651329856 1 -0.1210174560546875 4 Unmodified _KMPDDVWLV_ ENSG00000110514|ENST00000706887|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6|MADD 49.93300154707207 0.0405168250806675 3 [W{I|L}][DG]DVW{I|L}V 9 3 + 46.677 0.0 0.0 4.2374 4.2374 83.101 0.0 0.0 0.0 10.474148691603844 15.007718356501556 10.474148691603844 10.713337517843648 0 0.7742275032520141 1.6989700043360187 1.0114393726401687 0.0 [W{I|L}][DG]DVW{I|L}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DP]DVW{I|L}V;[W{I|L}]Y{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM}{I|L}V;{[RE]|[WV]}{[DA]|[EG]}DVW{I|L}V;{[RE]|[WV]}WDV{[DA]|[EG]}{I|L}V;[VS][HC]MKW{I|L}V;[VP]DDMKW{I|L}V;[VS][DP]WTW{I|L}V;[VS][HC]WMK{I|L}V;[VP]DDWMK{I|L}V 4.2374;3.2648;3.1451;3.1321;3.1321;2.8548;2.7414;2.6216;2.508;2.3946 -;+;-;-;-;-;-;-;-;- + 579 1 1.513 70260.6 1.0 13830 5823 19651 HBL1_DMSO_200M_050219_1,19655 HBL1_DMSO_200M_050219_1,19655,KMPDDVWLV True True KMPDDVWLV 94.667322 551.783984363079 29140172.0 19651.0 ENSG00000110514|ENST00000706887|MADD;;nc|ENSG00000110514|Q8WXG6-8|MADD;;nc|ENSG00000110514|Q8WXG6-4|MADD;;nc|ENSG00000110514|Q8WXG6-5|MADD;;nc|ENSG00000110514|Q8WXG6-6|MADD;;nc|ENSG00000110514|Q8WXG6-7|MADD;;nc|ENSG00000110514|Q8WXG6-3|MADD;;nc|ENSG00000110514|Q8WXG6-2|MADD;;nc|ENSG00000110514|Q8WXG6|MADD 5.375463008880615 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19656 94.669 79.0 1657500.0 25 0 190120.0 + 8242 EQDLLTSTDTL 11 122 618.3038637065497 1234.5931744798993 2 618.3043701052666 MULTI CID FTMS 0 0 0 19651 642184.1875 0.0583107311639306 -2 0.2274093627929687 5 Unmodified _EQDLLTSTDTL_ REV__ENSG00000137145|ENST00000434457|DENND4C;REV__ENST00000602708.1_1_9:19230809-19276502:+|nuORF;REV__nc|ENSG00000137145|Q5VZ89-3|DENND4C;REV__nc|ENSG00000137145|Q5VZ89-5|DENND4C;REV__nc|ENSG00000137145|Q5VZ89|DENND4C 23.78978130925829 0.5336113198261219 3 [{I|L}A]GED{I|L}A{I|L} 8 -1 66.491 0.0 0.0 5.3856 0.0 0.0 0.0 449.1517617733767 449.1517617733767 48.94210584403467 0.0 0.0 0.0 0 1.0941876774005248 2.0 1.5986198691406326 0.0 [{I|L}A]GED{I|L}A{I|L} 5.3856 - 1729 1 1.513 101055.6 1.0 13831 5823 19651 HBL1_DMSO_200M_050219_1,19656 HBL1_DMSO_200M_050219_1,19656,EQDLLTSTDTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19657 94.672 148.0 654970.0 25 0 199280.0 + 2567 ASGLLSLVAP 10 94 464.2792162609106 926.5438795886212 2 464.2792846560478 MULTI CID FTMS 0 0 0 19651 510597.15625 0.0975173160567949 5 -0.6367340087890625 6 Unmodified _ASGLLSLVAP_ REV__ENSG00000223731|ENST00000686983|SUPT20HL1;REV__nc|ENSG00000223731|Q3ZLR7|SUPT20HL1 37.97399986684836 0.1789611706409123 3 {[TV]|[{I|L}S]}Q{I|L}S 5 -1 39.654 0.0 0.0 4.2797 0.0 0.0 0.0 395.2296455400463 395.2296455400463 9.66180415828585 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.424742501084005 0.0 {[TV]|[{I|L}S]}Q{I|L}S 4.2797 - 748 1 1.513 79587.1 1.0 13832 5823 19651 HBL1_DMSO_200M_050219_1,19657 HBL1_DMSO_200M_050219_1,19657,ASGLLSLVAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19658 94.675 136.0 1096600.0 25 0 177200.0 + 13871 HVLDTLIQL 9 120 526.3100911964252 1050.6056294596503 2 526.3109619021416 MULTI CID FTMS 0 0 0 19651 521919.53125 0.5859737913128903 -2 0.2274093627929687 7 Unmodified _HVLDTLIQL_ ENSG00000086758|ENST00000262854|HUWE1;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 70.71552829651908 0.0208223590022201 3 [HV]{I|L}DT{I|L}{I|L}[Q{I|L}] 9 0 + 64.671 0.0 0.0 6.1556 6.1556 85.036 0.0 0.0 0.0 6.232492903979008 7.147642715192504 6.232492903979008 6.232492903979008 0 0.3807196863200844 1.3010299956639813 1.1989700043360187 0.0 + + [HV]{I|L}DT{I|L}{I|L}[Q{I|L}];[H{I|L}]VDT{I|L}{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}{I|L}SHV{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}{I|L}SVH{I|L}[Q{I|L}];[HV]{I|L}{[ET]|[MV]}V{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}{I|L}SH{I|L}V[Q{I|L}];{[TV]|[{I|L}S]}[YT]T{I|L}{I|L}[Q{I|L}];{NN|[MP]|[D{I|L}]|[EV]}[HV]T{I|L}{I|L}[Q{I|L}];[H{I|L}]V{[ET]|[MV]}V{I|L}[Q{I|L}];{[TV]|[{I|L}S]}{[QN]|[E{I|L}]|[KN]}HV{I|L}[Q{I|L}] 6.1556;5.5623;4.8342;4.1191;4.1085;3.8568;3.8442;3.6183;3.5153;3.3184 +;-;-;-;-;-;-;-;-;- + 625 1 1.513 114981.7 1.0 13833 5823 19651 HBL1_DMSO_200M_050219_1,19658 HBL1_DMSO_200M_050219_1,19658,HVLDTLIQL True True HVLDTLIQL 94.674849 526.310961902142 8089198.5 19651.0 ENSG00000086758|ENST00000262854|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 5.474946022033691 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19659 94.677 99.0 1118600.0 25 0 99471.0 + 12142 GQLEFRALL 9 120 523.8030309302491 1045.591508927298 2 523.8024169802666 MULTI CID FTMS 0 0 0 19651 499952.9375 0.204206889424937 -2 0.2274093627929687 8 Unmodified _GQLEFRALL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000224411|Q14568|HSP90AA2P 47.594388314883695 0.0456443387682827 3 {[QG]|[NA]}{I|L}E{M(Oxidation (M))|F}RA{I|L}{I|L} 9 0 + 53.598 0.0 0.0 5.126 5.126 86.943 0.0 0.0 0.0 9.775745588823987 13.280090639297056 9.775745588823987 14.999999999999991 0 1.9489700043360187 0.6989700043360187 0.3807196863200844 0.0 + + {[QG]|[NA]}{I|L}E{M(Oxidation (M))|F}RA{I|L}{I|L};[QA]VE{M(Oxidation (M))|F}RA{I|L}{I|L};{[TV]|[{I|L}S]}[RP]YNA{I|L}{I|L};{[TV]|[{I|L}S]}[RP]YGGA{I|L}{I|L};{[QG]|[NA]}{I|L}[RD]{M(Oxidation (M))|F}VV{I|L};[AG]G{I|L}[RD]{M(Oxidation (M))|F}VV{I|L};{[TV]|[{I|L}S]}[RP]VY[QA]{I|L};{[TV]|[{I|L}S]}[RP]Y{I|L}{[QG]|[NA]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A[RD]{M(Oxidation (M))|F}VV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}T[RV]{[QG]|[NA]}{I|L} 5.126;3.6915;3.6389;2.7582;2.663;2.3215;2.1836;2.1373;1.9907;1.8556 +;-;-;-;-;-;-;-;-;- + 1437 + 1 1.513 91053.6 1.0 13834 5823 19651 HBL1_DMSO_200M_050219_1,19659 HBL1_DMSO_200M_050219_1,19659,GQLEFRALL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19660 94.679 104.0 1201700.0 25 0 160640.0 41760 VPVALFKVL 9 113 493.3239794124513 984.6334058917024 2 493.3240234255791 MULTI CID FTMS 0 0 0 19651 442923.4375 0.0696826926805815 4 -0.4964370727539062 9 Unmodified _VPVALFKVL_ ENST00000320583.9_3_7:99162026-99162146:+|nuORF 30.22481116460888 0.1466181017706357 3 {I|L}{I|L}[WK]{I|L}TV{I|L} 8 6 + 39.742 0.0 0.0 4.0362 4.0362 80.594 0.0 0.0 0.0 1.2177800564282393 12.038654110982492 1.2177800564282393 9.155694969757558 0 0.3807196863200844 1.154901959985743 0.5 0.0 {I|L}{I|L}[WK]{I|L}TV{I|L};[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}TV{I|L};[VS][RV]V{I|L}TV{I|L};[VP]SKK[KS]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]V{I|L}TV{I|L};{[QN]|[E{I|L}]|[KN]}A{I|L}{I|L}[KS]V{I|L};{[QN]|[E{I|L}]|[KN]}A{I|L}V[KT]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}RR[KS]V{I|L};[VS]PKK[KS]V{I|L} 4.0362;3.1063;2.8293;2.7523;2.7094;2.1793;1.7707;0.63619;0.55578 -;-;-;-;-;-;-;-;- 585 1 1.513 96605.6 1.0 13835 5823 19651 HBL1_DMSO_200M_050219_1,19660 HBL1_DMSO_200M_050219_1,19660,VPVALFKVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19661 94.683 211.0 575750.0 25 0 74534.0 + 21537 LPIVPQLQV 9 106 503.8181862993047 1005.6218196654096 2 503.8187744021416 MULTI CID FTMS 0 0 0 19651 370117.65625 0.4221859256160939 1 -0.1210174560546875 10 Unmodified _LPIVPQLQV_ ENSG00000095015|ENST00000399503|MAP3K1 93.88341677533236 0.0134066622201488 3 [{I|L}P]{I|L}VPQ{I|L}QV 9 0 + 60.38 0.0 0.0 6.0043 6.0043 80.034 0.0 0.0 0.0 3.649954683873865 9.137342758552691 3.649954683873865 2.680854553793303 0 1.1571406706489746 1.2218487496163564 0.0 0.6747425010840047 + + [{I|L}P]{I|L}VPQ{I|L}QV;[{I|L}P]Q{I|L}PV{I|L}QV;[{I|L}P]{I|L}VQP{I|L}QV;[QP]{I|L}{I|L}PV{I|L}QV;[{I|L}P]Q{I|L}VP{I|L}QV;[QP]{I|L}{I|L}VP{I|L}QV;[{I|L}P]QVP{I|L}{I|L}QV;[QP]{I|L}VP{I|L}{I|L}QV;[{I|L}P]{I|L}QPV{I|L}QV;[{I|L}P]QV{I|L}P{I|L}QV 6.0043;5.7377;5.7049;5.6413;5.6135;5.5171;5.4383;5.342;5.1512;5.139 +;-;-;-;-;-;-;-;-;- + 1271 1 1.513 96406.0 1.0 13836 5823 19651 HBL1_DMSO_200M_050219_1,19661 HBL1_DMSO_200M_050219_1,19661,LPIVPQLQV True True LPIVPQLQV 94.683201 503.818774402142 7223005.0 19651.0 ENSG00000095015|ENST00000399503|MAP3K1 5.529142538706462 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19662 94.697 800.0 305830.0 25 0 32200.0 + 4518 DAYLPLRL 8 151 480.7794978968272 959.5444428604544 2 480.7789794802666 MULTI CID FTMS 0 0 0 19651 182154.03125 0.0043794303334727 21 -2.476478576660156 11 Unmodified _DAYLPLRL_ ENSG00000062822|ENST00000440232|POLD1 42.09456458481378 0.1992492688217789 3 [VS]{M(Oxidation (M))|F}E{I|L}[RP]{I|L} 8 5 + 60.793 0.0 0.0 6.3356 6.3356 84.959 0.0 0.0 0.0 33.63048498150073 12.579992504528391 12.579992504528391 5.440680443502757 0 0.9247425010840048 2.0 0.3252574989159953 0.2887254899964357 [VS]{M(Oxidation (M))|F}E{I|L}[RP]{I|L};[VS]{M(Oxidation (M))|F}EP[R{I|L}]{I|L};[VS]{M(Oxidation (M))|F}{I|L}E[RP]{I|L};[VS]{M(Oxidation (M))|F}PE[R{I|L}]{I|L};[VS]{I|L}{M(Oxidation (M))|F}E[RP]{I|L};[VS]{M(Oxidation (M))|F}E{I|L}[{I|L}P]R;[VS]{M(Oxidation (M))|F}EP{I|L}{I|L}R;[VS]{I|L}ME[R{I|L}]{I|L};[VS]{M(Oxidation (M))|F}{I|L}E[{I|L}P]R;[VS]{M(Oxidation (M))|F}PE{I|L}{I|L}R 6.3356;5.7686;5.588;4.9705;4.9174;4.8734;4.3064;4.2999;4.1258;3.5083 -;-;-;-;-;-;-;-;-;- 604 + 1 1.513 189789.8 0.6100000143051147 13837 5823 19651 HBL1_DMSO_200M_050219_1,19662 HBL1_DMSO_200M_050219_1,19662,DAYLPLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19663 94.705 429.0 597120.0 25 0 67428.0 + 39357 GIIDINVRL 9 200 505.83208242790425 1009.6496119226084 2 506.3324767947197 MULTI CID FTMS 0 0 0 19651 172751.53125 0.579063519709197 1 -0.1210174560546875 12 Unmodified _VAGLVVLAAVV_ nc|ENSG00000138231|Q9UK59-2|DBR1;ENSG00000138231|ENST00000260803|DBR1 21.74664581756881 0.5815847713327531 3 {[VA]|[{I|L}G]}G{I|L}E{I|L}{I|L}VV 9 4 37.85 0.0 0.0 3.7488 0.0 0.0 0.0 113.05827826465853 113.05827826465853 10.920383345346202 0.0 0.0 0.0 0 0.25 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}G{I|L}E{I|L}{I|L}VV 3.7488 - 1800 1 1.513 192784.8 1.0 13838 5823 19651 HBL1_DMSO_200M_050219_1,19663 HBL1_DMSO_200M_050219_1,19663,VAGLVVLAAVV False False GIIDINVRL 94.704655 506.33247679472 1606200.0 19651.0 nc|ENSG00000138231|Q9UK59-2|DBR1;;ENSG00000138231|ENST00000260803|DBR1 3.2406949202219644 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19664 94.71 318.0 1565100.0 25 0 203020.0 + -1 AIIEYMPLL 9 140 1078.5842122972438 1077.5769358306438 1 1078.584155261517 MULTI CID FTMS 0 0 0 19651 130498.015625 0.2834539071552158 1 -0.1210174560546875 13 Oxidation (M) _AIIEYM(Oxidation (M))PLL_ ENSG00000137713|ENST00000527614|PPP2R1B;ENSG00000105568|ENST00000322088|PPP2R1A;nc|ENSG00000137713|P30154-2|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B 36.04419817259434 0.0971720506436186 3 MQV{I|L}{I|L}DR{[CT]|[{M(Oxidation (M))|F}G]} 9 -1 + 64.15 0.0 0.0 5.9531 5.9531 86.569 0.0 0.0 0.0 30.11649952845752 5.624019819664923 5.624019819664923 8.891307656375645 0 0.0 0.0 1.183324508278978 0.8116042352767734 MQV{I|L}{I|L}DR{[CT]|[{M(Oxidation (M))|F}G]};MQV{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}];M[AG]V{I|L}{I|L}DR{[CT]|[{M(Oxidation (M))|F}G]};MQ{I|L}V{I|L}DR{[CT]|[{M(Oxidation (M))|F}G]};M{I|L}N{I|L}{I|L}DR{[CT]|[{M(Oxidation (M))|F}G]};MQV{I|L}[{M(Oxidation (M))|F}T]V[Q{I|L}];M[AG]V{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}];MQ{I|L}V{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}];M{I|L}N{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}];M[AG]{I|L}V{I|L}DR{[CT]|[{M(Oxidation (M))|F}G]} 5.9531;5.128;5.0986;4.8074;4.7939;4.6894;4.2735;3.9823;3.9688;3.9529 -;-;-;-;-;-;-;-;-;- 4779 + 1 1.513 298173.0 1.0 13839 5823 19651 HBL1_DMSO_200M_050219_1,19664 HBL1_DMSO_200M_050219_1,19664,AIIEYMPLL False False AIIEYMPLL 94.710488 1078.58415526152 5675116.0 19651.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 3.459422508875529 1.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19665 94.717 389.0 219950.0 25 0 25718.0 + 35825 SVLDDKLVFV 10 134 567.8245492929235 1133.634545652647 2 567.8248779177666 MULTI CID FTMS 0 0 0 19651 133688.90625 0.2716912852285199 1 -0.1210174560546875 14 Unmodified _SVLDDKLVFV_ ENSG00000177119|ENST00000320560|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF;nc|ENSG00000177119|Q4KMQ2-2|ANO6;nc|ENSG00000177119|Q4KMQ2-3|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6 29.84058131909904 0.2982332456971691 3 [VS]GD{I|L}{I|L}VSV[{M(Oxidation (M))|F}V] 11 5 + 75.89 0.0 0.0 6.6944 6.6944 87.483 0.0 0.0 0.0 17.913462554614554 5.862435673934286 5.862435673934286 6.887226790792724 0 1.0 2.0 1.3352587893338912 0.0 [VS]GD{I|L}{I|L}VSV[{M(Oxidation (M))|F}V];[VS]{I|L}[DG]{I|L}VSV[{M(Oxidation (M))|F}V];[VS]GD{I|L}V{I|L}SV[{M(Oxidation (M))|F}V];[VS]{I|L}[DG]V{I|L}SV[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}DK{I|L}VSV[{M(Oxidation (M))|F}V];[VS]{I|L}{[RE]|[WV]}VW[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}V[DG]{I|L}VSV[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}DKV{I|L}SV[{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}{I|L}VSV[{M(Oxidation (M))|F}V];[VS][R{M(Oxidation (M))|F}]{I|L}[PA]V[{M(Oxidation (M))|F}V] 6.6944;6.0868;5.8988;5.2913;5.1142;4.552;4.4328;4.3186;4.1745;4.1166 -;-;-;-;-;-;-;-;-;- 1264 1 1.513 72707.0 1.0 13840 5823 19651 HBL1_DMSO_200M_050219_1,19665 HBL1_DMSO_200M_050219_1,19665,SVLDDKLVFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19666 94.723 324.0 697270.0 25 0 47119.0 + 25399 NDSQLFLRSL 10 174 596.8206432555494 1191.626733577899 2 596.8209716677666 MULTI CID FTMS 0 0 0 19651 119122.015625 0.0445169373205438 -2 0.2274093627929687 15 Unmodified _NDSQLFLRSL_ REV__ENST00000578419.5_1_17:77078294-77078564:+|nuORF 39.21299971606389 0.1658776112144286 3 [DN]S{I|L}GK{I|L}[{M(Oxidation (M))|F}V]S{I|L} 11 -1 [DN] + + 43.88 -2.297 -1.0027 3.6824 3.6824 51.686 0.0 0.0 0.0 0.0 19.32262536334545 0.0 0.0 0 1.0629529932484498 0.0 0.8754223615525999 0.9247425010840048 [DN]S{I|L}GK{I|L}[{M(Oxidation (M))|F}V]S{I|L} 3.6824 - 3395 + 1 1.513 166277.0 1.0 13841 5823 19651 HBL1_DMSO_200M_050219_1,19666 HBL1_DMSO_200M_050219_1,19666,NDSQLFLRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19667 94.738 800.0 284550.0 25 0 15371.0 + 23058 VPYPLPKIDL 10 202 577.8451173543981 1153.675681775596 2 577.8434936404228 MULTI CID FTMS 0 0 0 19651 107373.5625 0.6196083791794371 1 -0.1210174560546875 16 Unmodified _LSLGTLLPFPP_ nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2|NPEPPSL1;ENSG00000141279|ENST00000322157|NPEPPS;ENST00000602788.5_1_17:45660176-45669919:+|nuORF 47.74868867922204 0.1300977870992118 3 VPY{I|L}P{I|L}[KP]D{I|L} 10 9 + 71.795 0.0 0.0 6.2232 6.2232 77.41 0.0 0.0 0.0 29.140775299327537 3.30993219041423 3.30993219041423 0.5676571578941036 0 1.1307196863200843 1.5228787452803376 1.6199774179717892 0.0 VPY{I|L}P{I|L}[KP]D{I|L};VPYP{I|L}{I|L}[KP]D{I|L};VPY{I|L}P{I|L}[KP]EV;VPYP{I|L}{I|L}[KP]EV;VPY{I|L}P{I|L}[EP]KV;VPYP{I|L}{I|L}[EP]KV;VPY{I|L}PP[RV]T{I|L};VPY{I|L}P{I|L}{[SA]|[TG]}VPV;VPYP{I|L}P[RV]T{I|L};VPYP{I|L}{I|L}{[SA]|[TG]}VPV 6.2232;6.174;5.9363;5.887;5.7358;5.6866;5.5782;5.5524;5.529;5.5032 -;-;-;-;-;-;-;-;-;- 5281 + 1 1.513 174438.9 0.5299999713897705 13842 5823 19651 HBL1_DMSO_200M_050219_1,19667 HBL1_DMSO_200M_050219_1,19667,LSLGTLLPFPP False False VPYPLPKIDL 94.738363 577.843493640423 3852648.75 19651.0 nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;;nc|ENSG00000141279|P55786-2|NPEPPS;;nc|ENSG00000274487|A6NEC2|NPEPPSL1;;ENSG00000141279|ENST00000322157|NPEPPS;;ENST00000602788.5_1_17:45660176-45669919:+|nuORF 4.713443438212077 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19668 94.752 800.0 114030.0 25 0 7664.9 + -1 EQISAMITRSL 11 144 632.8309354192437 1263.6473179052873 2 632.8322021365166 MULTI CID FTMS 0 0 0 19651 108488.40625 0.3351169858952026 1 -0.1210174560546875 17 Oxidation (M) _EQISAM(Oxidation (M))ITRSL_ REV__ENSG00000099904|ENST00000334554|ZDHHC8;REV__ENST00000255890.8_1_22:23733884-23742504:-|nuORF;REV__ENST00000420968.5_1_22:23733901-23742504:-|nuORF;REV__nc|ENSG00000099904|Q9ULC8-2|ZDHHC8;REV__nc|ENSG00000099904|Q9ULC8-3|ZDHHC8 24.99096001346401 0.505407273373304 3 S{I|L}[KG]{I|L}{[WN]|[YH]}S{I|L} 9 -1 23.338 0.0 0.0 1.8469 0.0 0.0 247.0801177413237 0.0 247.0801177413237 0.0 8.618595570860887 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 S{I|L}[KG]{I|L}{[WN]|[YH]}S{I|L} 1.8469 - 409 + 1 1.513 81436.9 0.4900000095367431 13843 5823 19651 HBL1_DMSO_200M_050219_1,19668 HBL1_DMSO_200M_050219_1,19668,EQISAMITRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19669 94.766 800.0 334640.0 25 0 28969.0 + 17173 KLIQLQFEV 9 201 559.3349136485486 1116.6552743638972 2 559.3364745974541 MULTI CID FTMS 0 0 0 19651 102004.25 0.3127104108971972 1 -0.1210174560546875 18 Unmodified _KLIQLQFEV_ ENST00000393179.8_1_12:89885842-89919131:-|nuORF 49.93300154707207 0.0405168250806675 3 {I|L}YMV{M(Oxidation (M))|F}T{I|L} 7 7 40.17 0.0 0.0 3.5973 0.0 0.0 231.21113202645728 0.0 231.21113202645728 0.0 -2.9611097654594047 -2.9611097654594047 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}YMV{M(Oxidation (M))|F}T{I|L} 3.5973 - 5136 + 1 1.513 202333.1 0.4600000083446502 13844 5823 19651 HBL1_DMSO_200M_050219_1,19669 HBL1_DMSO_200M_050219_1,19669,KLIQLQFEV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19670 94.774 365.0 564520.0 25 0 51202.0 + 18778 LAPELIPSI 9 144 476.7891425095876 951.5637320859752 2 476.7897216677666 MULTI CID FTMS 0 0 0 19651 93368.8671875 0.560686738118262 -2 0.2274093627929687 19 Unmodified _LAPELIPSI_ ENSG00000184445|ENST00000333479|KNTC1 24.99096001346401 0.2132109383330889 3 {[VA]|[{I|L}G]}{I|L}[{I|L}T]VA{[YC]|[HE]} 9 7 + 43.134 0.0 0.0 4.5329 4.5329 78.107 0.0 0.0 0.0 7.781512503836431 0.7378621416091846 0.7378621416091846 4.771212547196619 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}[{I|L}T]VA{[YC]|[HE]};{[VA]|[{I|L}G]}{I|L}[{I|L}T]G{I|L}{[YC]|[HE]};{[VA]|[{I|L}G]}{I|L}{[TV]|[{I|L}S]}{I|L}A{[YC]|[HE]};{[VA]|[{I|L}G]}AKKVA{[YC]|[HE]};{[VA]|[{I|L}G]}{I|L}[{I|L}T]AV{[YC]|[HE]};[{I|L}A]V[{I|L}T]VA{[YC]|[HE]};{[{M(Oxidation (M))|F}H]|[RQ]}AV{I|L}[RP]{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}AV{I|L}{I|L}[RP];{[VA]|[{I|L}G]}{I|L}{[TV]|[{I|L}S]}A{I|L}{[YC]|[HE]};{[VA]|[{I|L}G]}AKKG{I|L}{[YC]|[HE]} 4.5329;4.0315;3.9002;3.8357;3.7152;3.7152;3.6382;3.4847;3.3988;3.3343 -;-;-;-;-;-;-;-;-;- 1027 1 1.513 159101.9 1.0 13845 5823 19651 HBL1_DMSO_200M_050219_1,19670 HBL1_DMSO_200M_050219_1,19670,LAPELIPSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19671 94.779 314.0 325600.0 25 0 74793.0 + 10055 FPRELFKLV 9 93 383.5659991295808 1147.6761679889423 3 383.5658141970634 MULTI CID FTMS 0 0 0 19651 95965.21875 0.6268769234663507 -1 0.1212158203125 20 Unmodified _FPRELFKLV_ ENSG00000184967|ENST00000330579|NOC4L 15.738622578938676 0.4106572216562794 3 [RP]E{I|L}{M(Oxidation (M))|F}K{I|L} 7 2 36.84 0.0 0.0 3.21 0.0 0.0 0.0 261.1244887108691 261.1244887108691 18.195086168149 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.3252574989159953 + [RP]E{I|L}{M(Oxidation (M))|F}K{I|L} 3.21 + + 177 1 1.513 87615.0 1.0 13846 5823 19651 HBL1_DMSO_200M_050219_1,19671 HBL1_DMSO_200M_050219_1,19671,FPRELFKLV False True FPRELFKLV 94.779492 383.565814197063 1360698.125 19651.0 ENSG00000184967|ENST00000330579|NOC4L 5.188515186309815 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19673 94.784 17.0 4334200.0 25 0 413350.0 + 1201 AIDPHLLLSV 10 98 539.317708364079 1076.6208637949578 2 539.8173705935478 MULTI CID FTMS 0 0 0 19672 3238108.25 0.7101528839182286 -1 0.1210174560546875 1 Unmodified _AIDPHLLLSV_ ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A 34.40172386719151 0.2166836008404837 3 [{I|L}A]GHD{I|L}{I|L}V 8 4 45.583 0.0 0.0 4.2339 0.0 0.0 0.0 255.1324365303932 255.1324365303932 -7.257724967479859 0.0 -7.257724967479859 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]GHD{I|L}{I|L}V 4.2339 - 763 1 1.554 64543.3 1.0 13847 5824 19672 HBL1_DMSO_200M_050219_1,19673 HBL1_DMSO_200M_050219_1,19673,AIDPHLLLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19674 94.785 57.0 2063800.0 25 0 355100.0 + 13276 HIPDVITYL 9 89 535.7982164087542 1069.5818798843084 2 535.7980834841728 MULTI CID FTMS 0 0 0 19672 917772.0625 0.2204901640987577 6 -0.7158126831054688 2 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 50.855029805455786 0.0384952370514206 3 [H{I|L}][DP]V{I|L}TY{I|L} 9 0 + 52.716 0.0 0.0 4.9286 4.9286 76.173 0.0 0.0 0.0 2.498774732165998 8.384767769392738 2.498774732165998 2.498774732165998 0 1.1237125054200234 1.5228787452803376 0.7887254899964358 0.0 + + [H{I|L}][DP]V{I|L}TY{I|L};[VP]D{I|L}H{I|L}TY{I|L};[H{I|L}][DP]VT{I|L}Y{I|L};[DP]V{I|L}H{I|L}TY{I|L};[VP]D{I|L}HT{I|L}Y{I|L};[DP]V{I|L}HT{I|L}Y{I|L};[VP]VEH{I|L}TY{I|L};[VP]D{I|L}TH{I|L}Y{I|L};[VP]DH{I|L}{I|L}TY{I|L};[DP]V{I|L}TH{I|L}Y{I|L} 4.9286;4.695;4.5768;4.4876;4.3432;4.1358;4.1321;4.0946;4.0415;3.8872 +;-;-;-;-;-;-;-;-;- + 735 1 1.554 95782.9 1.0 13848 5824 19672 HBL1_DMSO_200M_050219_1,19674 HBL1_DMSO_200M_050219_1,19674,HIPDVITYL True True HIPDVITYL 94.785423 535.798083484173 663168856.0 19672.0 nc|ENSG00000079459|P37268-4|FDFT1;;nc|ENSG00000079459|P37268-3|FDFT1;;nc|ENSG00000079459|P37268-5|FDFT1;;ENSG00000079459|ENST00000220584|FDFT1;;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;;nc|ENSG00000079459|P37268-2|FDFT1 8.327799161275228 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19675 94.787 39.0 3220200.0 25 0 460440.0 + 31284 RLYDGLFKVI 10 67 612.3612518503202 1222.7079507674405 2 612.3613159060478 MULTI CID FTMS 0 0 0 19672 1406685.5 0.2759853575378407 -1 0.1210174560546875 3 Unmodified _RLYDGLFKVI_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 33.82136114134338 0.222812100547209 3 {M(Oxidation (M))|F}VDD{I|L}{M(Oxidation (M))|F}KV{I|L} 9 4 55.315 0.0 0.0 4.524 0.0 0.0 128.09536940742345 0.0 128.09536940742345 0.0 47.356537694451575 0.0 0.0 0 1.1237125054200234 0.0 0.4247425010840047 0.4247425010840047 {M(Oxidation (M))|F}VDD{I|L}{M(Oxidation (M))|F}KV{I|L} 4.524 - 298 1 1.554 102096.3 1.0 13849 5824 19672 HBL1_DMSO_200M_050219_1,19675 HBL1_DMSO_200M_050219_1,19675,RLYDGLFKVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19676 94.789 95.0 1068400.0 25 0 190740.0 + 4667 DAYVLPKLYV 10 102 590.8342767634228 1179.6540005936456 2 590.8347656130791 MULTI CID FTMS 0 0 0 19672 665287.625 0.011597513051585 10 -1.1302947998046875 4 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 60.07390631473393 0.0363923079357811 3 {[DA]|[EG]}YV{I|L} 5 5 43.672 0.0 0.0 3.7021 0.0 0.0 0.0 615.3502645919456 615.3502645919456 0.674260048329117 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YV{I|L} 3.7021 + + 607 1 1.554 81040.4 1.0 13850 5824 19672 HBL1_DMSO_200M_050219_1,19676 HBL1_DMSO_200M_050219_1,19676,DAYVLPKLYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19677 94.792 150.0 751940.0 25 0 72696.0 + 17239 KLLPQLTYL 9 136 544.8388854223538 1087.6632179115074 2 544.8388549685478 MULTI CID FTMS 0 0 0 19672 362999.34375 0.898016775534132 -1 0.1210174560546875 5 Unmodified _KLLPQLTYL_ ENSG00000136938|ENST00000339399|ANP32B;ENSG00000140350|ENST00000465139|ANP32A;ENST00000483551.6_1_15:69072422-69081590:-|nuORF;ENST00000486769.1_1_9:100760930-100767440:+|nuORF;nc|ENSG00000136938|Q92688-2|ANP32B 45.69961567697781 0.0497987121815769 3 [QP]{I|L}{I|L}K{I|L}TY{I|L} 9 4 + 72.139 0.0 0.0 6.6325 6.6325 85.955 0.0 0.0 0.0 16.00820919212412 56.45294445944191 16.00820919212412 5.529863300419692 0 1.1203715150305282 0.8860566476931632 0.5 0.3252574989159953 [QP]{I|L}{I|L}K{I|L}TY{I|L};[QP]{I|L}{I|L}KT{I|L}Y{I|L};[QP]{I|L}T[K{I|L}]{I|L}Y{I|L};[K{I|L}]{I|L}[QP]{I|L}TY{I|L};[Q{I|L}]P{I|L}K{I|L}TY{I|L};[K{I|L}]{I|L}[QP]T{I|L}Y{I|L};[Q{I|L}]P{I|L}KT{I|L}Y{I|L};[VP]AA{I|L}K{I|L}TY{I|L};[K{I|L}]{I|L}{I|L}[QP]TY{I|L};[VP]AA{I|L}KT{I|L}Y{I|L} 6.6325;6.1241;5.3219;4.8713;4.6866;4.3629;4.1782;3.9791;3.742;3.4706 -;-;-;+;-;-;-;-;-;- + 556 1 1.554 88186.9 1.0 13851 5824 19672 HBL1_DMSO_200M_050219_1,19677 HBL1_DMSO_200M_050219_1,19677,KLLPQLTYL True True KLLPQLTYL 94.791679 544.838854968548 3788080.0 19672.0 nc|ENSG00000136938|Q92688-2|ANP32B;;ENST00000483551.6_1_15:69072422-69081590:-|nuORF;;ENSG00000140350|ENST00000465139|ANP32A;;ENST00000486769.1_1_9:100760930-100767440:+|nuORF;;ENSG00000136938|ENST00000339399|ANP32B 6.239752928415935 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19678 94.796 224.0 641120.0 25 0 105730.0 + 13592 HPLVILNI 8 94 459.7920439438144 917.5695349544288 2 459.7921630740166 MULTI CID FTMS 0 0 0 19672 369515.125 0.0199397872751914 7 -0.81658935546875 6 Unmodified _HPLVILNI_ ENSG00000168090|ENST00000303904|COPS6;ENST00000465027.1_1_7:99686595-99687052:+|nuORF;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 45.7499826716795 0.1592378023510922 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L} 8 0 + 70.214 0.0 0.0 7.6522 7.6522 93.098 0.0 0.0 0.0 26.281446971601312 50.66183773464459 26.281446971601312 9.262137858390815 0 0.7302046884880937 0.0 2.079689690656103 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}GG{I|L};[{I|L}P]HV{I|L}{I|L}N{I|L};[{I|L}P]VH{I|L}{I|L}N{I|L};[{I|L}V]PH{I|L}{I|L}N{I|L};[{I|L}P]V{I|L}H{I|L}N{I|L};[{I|L}V]P{I|L}H{I|L}N{I|L};[{I|L}P]HV{I|L}{I|L}GG{I|L};[{I|L}V]{I|L}PH{I|L}N{I|L};{I|L}{I|L}VPH{I|L}N{I|L} 7.6522;6.6428;4.6239;4.432;4.2728;3.912;3.7528;3.6145;3.5609;3.5282 +;-;-;-;-;-;-;-;-;- + 190 1 1.554 113904.5 1.0 13852 5824 19672 HBL1_DMSO_200M_050219_1,19678 HBL1_DMSO_200M_050219_1,19678,HPLVILNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19679 94.801 258.0 842200.0 25 0 71264.0 + 11772 GLLAVLRPL 9 125 476.3211159216749 950.6276789101496 2 476.3212768435478 MULTI CID FTMS 0 0 0 19672 352231.625 0.1731545557539747 -3 0.3484268188476562 7 Unmodified _GLLAVLRPL_ ENSG00000168569|ENST00000307366|TMEM223 70.71552829651908 0.0208223590022201 3 {[VA]|[{I|L}G]}{I|L}AV{I|L}[RP]{I|L} 9 0 + 77.144 0.0 0.0 8.115 8.115 82.592 0.0 0.0 0.0 18.866840669636268 0.772467462704256 0.772467462704256 0.772467462704256 0 1.555462187404089 2.0 0.0 0.6694451763165201 + + {[VA]|[{I|L}G]}{I|L}AV{I|L}[RP]{I|L};{[VA]|[{I|L}G]}{I|L}AV{I|L}{I|L}PR;{[VA]|[{I|L}G]}{I|L}AV{I|L}{I|L}RP;{[VA]|[{I|L}G]}{I|L}{I|L}G{I|L}[RP]{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}G{I|L}{I|L}PR;{[VA]|[{I|L}G]}{I|L}{I|L}G{I|L}{I|L}RP;{[VA]|[{I|L}G]}{I|L}VA{I|L}[RP]{I|L};{[VA]|[{I|L}G]}{I|L}A{I|L}V[RP]{I|L};{[VA]|[{I|L}G]}{I|L}VA{I|L}{I|L}PR;{[VA]|[{I|L}G]}{I|L}A{I|L}V{I|L}PR 8.115;8.0338;7.98;7.7083;7.627;7.5732;7.0376;6.9881;6.9563;6.9068 +;-;-;-;-;-;-;-;-;- + 1519 + 1 1.554 174341.8 1.0 13853 5824 19672 HBL1_DMSO_200M_050219_1,19679 HBL1_DMSO_200M_050219_1,19679,GLLAVLRPL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19680 94.809 477.0 375150.0 25 0 27267.0 + 10147 FPWSEIRNI 9 158 581.3042992557498 1160.5940455782995 2 581.3068725466728 MULTI CID FTMS 0 0 0 19672 191167.984375 0.1166280783671225 -7 0.8598251342773438 8 Unmodified _FPWSEIRNI_ ENSG00000092820|ENST00000367075|EZR;ENSG00000137710|ENST00000645495|RDX;ENSG00000147065|ENST00000360270|MSN;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX 71.92227651296345 0.0203558744033348 3 {I|L}MWSE{I|L}[RN]{I|L} 9 2 + 85.015 0.0 0.0 7.3251 7.3251 89.74 0.0 0.0 0.0 46.886692270195866 6.962724883926654 6.962724883926654 7.614393726401687 0 1.0044321917401078 2.0 0.6861818737241735 0.3494850021680094 {I|L}MWSE{I|L}[RN]{I|L};{I|L}M{I|L}C(Carbamidomethyl (C))E{I|L}[RN]{I|L};{I|L}M{[DA]|[EG]}SE{I|L}[RN]{I|L};{M(Oxidation (M))|F}PWSE{I|L}[RN]{I|L};{I|L}M{I|L}[CG]E{I|L}[RN]{I|L};{I|L}MWS[KG][RH]{M(Oxidation (M))|F};{M(Oxidation (M))|F}P{I|L}C(Carbamidomethyl (C))E{I|L}[RN]{I|L};{M(Oxidation (M))|F}P{[DA]|[EG]}SE{I|L}[RN]{I|L};{M(Oxidation (M))|F}{I|L}PC(Carbamidomethyl (C))E{I|L}[RN]{I|L};{I|L}M{I|L}C(Carbamidomethyl (C))[KG][RH]{M(Oxidation (M))|F} 7.3251;6.6691;6.5317;6.2272;5.8757;5.7242;5.5712;5.4338;5.088;4.8049 -;-;-;+;-;-;-;-;-;- + 1373 + 1 1.554 139107.4 1.0 13854 5824 19672 HBL1_DMSO_200M_050219_1,19680 HBL1_DMSO_200M_050219_1,19680,FPWSEIRNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19681 94.815 316.0 317720.0 25 0 76276.0 + 4931 DGLTVHLVI 9 119 483.7845946902921 965.5546364473844 2 483.7851440310478 MULTI CID FTMS 0 0 0 19672 186002.96875 0.0680677800633386 6 -0.7158126831054688 9 Unmodified _DGLTVHLVI_ ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000175520|ENST00000311659|UBQLN3;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000472638.1_1_1:156020124-156021603:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;nc|ENSG00000160803|Q9NRR5-2|UBQLN4 97.07464715276576 0.0121042244793311 3 [H{I|L}]S{I|L}[DG]{I|L}V{I|L} 9 6 + 64.58 0.0 0.0 6.6884 6.6884 84.623 0.0 0.0 0.0 9.29349374989866 9.889917747712644 9.29349374989866 4.247425010840047 0 0.2614393726401688 0.958607314841775 1.350576203518622 0.0 [H{I|L}]S{I|L}[DG]{I|L}V{I|L};[H{I|L}]S{I|L}V{[DA]|[EG]}V{I|L};[H{I|L}]VT[DG]{I|L}V{I|L};[H{I|L}]S{I|L}{I|L}[DG]V{I|L};[DG]{I|L}TVH{I|L}V{I|L};[H{I|L}]VTV{[DA]|[EG]}V{I|L};{[TV]|[{I|L}S]}H{I|L}[DG]{I|L}V{I|L};[H{I|L}]VT{I|L}[DG]V{I|L};{[TV]|[{I|L}S]}H{I|L}V{[DA]|[EG]}V{I|L};[H{I|L}]VVT{[DA]|[EG]}V{I|L} 6.6884;6.2485;6.1284;5.8615;5.7259;5.6885;5.4262;5.3015;4.9864;4.9646 -;-;-;-;+;-;-;-;-;- + 2192 1 1.554 82380.8 1.0 13855 5824 19672 HBL1_DMSO_200M_050219_1,19681 HBL1_DMSO_200M_050219_1,19681,DGLTVHLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19682 94.819 229.0 415660.0 25 0 61803.0 + 5666 DPFQQTFIV 9 134 547.7795086244314 1093.5444643156627 2 547.7794677615166 MULTI CID FTMS 0 0 0 19672 139122.53125 0.7662589805097916 -1 0.1210174560546875 10 Unmodified _DPFQQTFIV_ ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1 34.40172386719151 0.1061884637610825 3 {[MS]|[{M(Oxidation (M))|F}A]}GPDQT{M(Oxidation (M))|F}{I|L}V 10 5 + 35.935 0.0 0.0 3.2861 3.2861 50.759 0.0 0.0 0.0 4.032125137753436 8.507112333562858 4.032125137753436 0.0 0 0.6549471895720985 0.0 1.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}GPDQT{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}GPQDT{M(Oxidation (M))|F}{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PQDT{M(Oxidation (M))|F}{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PDQT{M(Oxidation (M))|F}{I|L}V;[{I|L}V]C(Carbamidomethyl (C))QDT{M(Oxidation (M))|F}{I|L}V;[{I|L}V]C(Carbamidomethyl (C))DQT{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}GPD[AG]T{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}GP[AG]DT{M(Oxidation (M))|F}{I|L}V;[QP]{M(Oxidation (M))|F}QDT{M(Oxidation (M))|F}{I|L}V;[QP]{M(Oxidation (M))|F}DQT{M(Oxidation (M))|F}{I|L}V 3.2861;3.2861;2.9174;2.9174;2.6495;2.6495;2.448;2.448;2.1382;2.1382 -;-;-;-;-;-;-;-;-;- 1069 1 1.554 79540.1 1.0 13856 5824 19672 HBL1_DMSO_200M_050219_1,19682 HBL1_DMSO_200M_050219_1,19682,DPFQQTFIV True True DPFQQTFIV 94.819167 547.779467761517 0.0 19672.0 nc|ENSG00000163349|Q86Z02-3|HIPK1;;nc|ENSG00000163349|Q86Z02-4|HIPK1;;ENSG00000163349|ENST00000426820|HIPK1;;nc|ENSG00000163349|Q86Z02-2|HIPK1 3.915331919987997 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19683 94.826 358.0 580160.0 25 0 58104.0 + 44445 YMLEHVITL 9 163 559.7997288934064 0 559.7997924685478 PEAK CID FTMS 0 0 0 19672 140825.578125 0.2546717988874147 -1 0.1210174560546875 11 Unmodified _YMLEHVITL_ ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF 57.47134341890925 0.0195089841803479 3 T{I|L}V{M(Oxidation (M))|F}T 5 6 33.02 0.0 0.0 2.9546 0.0 0.0 425.1992232954622 128.07204614810783 553.2712694435701 0.0 0.0 0.0 0.0 0 0.5 0.0 0.9604093769761876 0.0 T{I|L}V{M(Oxidation (M))|F}T 2.9546 - 1330 + 1 1.554 159340.6 1.0 13857 5824 19672 HBL1_DMSO_200M_050219_1,19683 HBL1_DMSO_200M_050219_1,19683,YMLEHVITL True True YMLEHVITL 94.825623 559.799792468548 10431363.75 19672.0 ENST00000436959.7_1_12:123087118-123101977:+|nuORF;;ENSG00000184445|ENST00000333479|KNTC1 5.129722436269124 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19684 94.839 800.0 422390.0 25 0 85544.0 + + -1 RLLESLIRL 9 221 556.8610409705378 1111.7075290078756 2 556.8616210818291 MULTI CID FTMS 0 0 0 19672 122250.5625 1.0 0 0.0 12 Carbamidomethyl (C) _LVC(Carbamidomethyl (C))LLLGLVL_ nc|ENSG00000111877|Q9NXL9-4|MCM9;ENSG00000111877|ENST00000619706|MCM9;nc|ENSG00000111877|Q9NXL9-2|MCM9 49.66892048692302 0.0820940618861154 3 [{I|L}V]{I|L}WS{I|L}{I|L} 7 -1 46.987 0.0 0.0 4.2266 0.0 0.0 0.0 284.17306134647305 284.17306134647305 19.55214169069926 0.0 0.0 0.0 0 0.7302046884880938 1.3979400086720375 0.0 0.0 [{I|L}V]{I|L}WS{I|L}{I|L} 4.2266 - 2868 1 1.554 256177.9 0.5400000214576721 13858 5824 19672 HBL1_DMSO_200M_050219_1,19684 HBL1_DMSO_200M_050219_1,19684,LVCLLLGLVL False False RLLESLIRL 94.839454 556.861621081829 1620539.625 19672.0 nc|ENSG00000111877|Q9NXL9-4|MCM9;;ENSG00000111877|ENST00000619706|MCM9;;nc|ENSG00000111877|Q9NXL9-2|MCM9 4.886345863342285 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19685 94.853 800.0 345470.0 25 0 34434.0 + 44577 YPFIFPLHKV 10 163 420.9096668566007 1259.707171170002 3 420.9097167849541 MULTI CID FTMS 0 0 0 19672 120420.7109375 0.3539966502507765 -1 0.1210174560546875 13 Unmodified _YPFIFPLHKV_ ENSG00000109929|ENST00000264027|SC5D 65.23502041540118 0.0228537820337083 3 YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}P{I|L}HKV 10 0 + 84.051 0.0 0.0 6.6723 6.6723 83.335 0.0 0.0 0.0 28.081144737610863 3.187587626244124 3.187587626244124 3.187587626244124 0 1.4604093769761874 1.154901959985743 0.0 0.1803115997617927 + + YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}P{I|L}HKV;YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}P{I|L}HVK;YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}P{I|L}VHK;YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}P{I|L}VKH;YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}V[{I|L}P]HK;YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}V[HK]P{I|L};YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}V[{I|L}P]KH;YP{M(Oxidation (M))|F}{I|L}V{M(Oxidation (M))|F}[{I|L}P]HK;YP{M(Oxidation (M))|F}{I|L}V{M(Oxidation (M))|F}[HK]P{I|L};YP{M(Oxidation (M))|F}{I|L}V{M(Oxidation (M))|F}[{I|L}P]KH 6.6723;6.4192;6.0371;5.8502;4.7778;4.7104;4.5909;3.8858;3.8184;3.6988 +;-;-;-;-;-;-;-;-;- + 2023 + 1 1.554 224621.4 0.449999988079071 13859 5824 19672 HBL1_DMSO_200M_050219_1,19685 HBL1_DMSO_200M_050219_1,19685,YPFIFPLHKV True True YPFIFPLHKV 94.853269 420.909716784954 2365287.5 19672.0 ENSG00000109929|ENST00000264027|SC5D 7.71234146753947 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19686 94.868 800.0 358690.0 25 0 76138.0 + 14907 ILLKALTNL 9 210 499.8341706910992 0 499.8338500857353 PEAK CID FTMS 0 0 0 19672 120881.75 0.7829590028072007 -1 0.1210174560546875 14 Unmodified _ILLKALTNL_ ENSG00000178982|ENST00000248342|EIF3K;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K 155.02607137521346 4.232264381537153e-24 3 {I|L}{I|L}RRTN 6 5 40.584 0.0 0.0 4.068 0.0 0.0 113.07941127216208 128.07212244205314 241.15153371421525 0.0 0.0 0.0 0.0 0 1.6936726795685342 0.0 0.9559771852360796 1.989651828710444 {I|L}{I|L}RRTN 4.068 - 4516 + 1 1.554 216799.0 0.4900000095367431 13860 5824 19672 HBL1_DMSO_200M_050219_1,19686 HBL1_DMSO_200M_050219_1,19686,ILLKALTNL True True ILLKALTNL 94.868258 499.833850085735 1341055.75 19672.0 ENST00000586932.5_1_19:39109833-39116793:+|nuORF;;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;;ENSG00000178982|ENST00000248342|EIF3K;;nc|ENSG00000178982|Q9UBQ5-2|EIF3K 4.058194637298584 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19687 94.872 183.0 725640.0 25 0 82314.0 + 31286 RLYDGLFKVI 10 97 408.5763345462484 1222.707174238945 3 408.9105712771416 MULTI CID FTMS 0 0 0 19672 114865.4609375 0.3744245138851114 -1 0.1210174560546875 15 Unmodified _RLYDGLFKVI_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 89.60864043982822 0.0093616182375763 3 [R{I|L}]YDG{I|L}{M(Oxidation (M))|F}KV{I|L} 10 0 + 100.83 0.0 0.0 8.2461 8.2461 97.32 0.0 0.0 0.0 29.106056125004827 76.89896278884483 29.106056125004827 36.313506577119625 0 1.6237125054200234 1.3979400086720375 1.885151878060192 0.9361818737241736 + + [R{I|L}]YDG{I|L}{M(Oxidation (M))|F}KV{I|L};{[YD]|[{M(Oxidation (M))|F}M]}[R{I|L}]G{I|L}{M(Oxidation (M))|F}KV{I|L};[R{I|L}]S{I|L}[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}KV{I|L};[R{I|L}]S{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TKV{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{I|L}[{M(Oxidation (M))|F}E]TKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}[{M(Oxidation (M))|F}E]TKV{I|L} 8.2461;5.2762;4.4217;3.5423;3.3586;2.6351 +;-;-;-;-;- + 622 1 1.554 110452.9 1.0 13861 5824 19672 HBL1_DMSO_200M_050219_1,19687 HBL1_DMSO_200M_050219_1,19687,RLYDGLFKVI True True RLYDGLFKVI 94.871793 408.5766 99683196.75 19672.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 6.666104793548584 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19688 94.88 455.0 317670.0 25 0 20350.0 + + 28792 LPYVGPSVTPMTI 13 136 687.8701532545032 1373.7257535758065 2 687.8719360232353 MULTI CID FTMS 0 0 0 19672 102459.0859375 0.2677165632402655 -1 0.1210174560546875 16 Unmodified _PYMIRPRPFTP_ ENST00000487440.5_1_3:47281337-47324087:-|nuORF;ENSG00000088727|ENST00000684063|KIF9;ENST00000484629.1_1_3:47307469-47316817:-|nuORF;nc|ENSG00000088727|Q9HAQ2-2|KIF9 26.268140514670165 0.4754186812857754 3 {NN|[MP]|[D{I|L}]|[EV]}T{I|L}TR{I|L}T{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T] 12 -1 + 65.134 0.0 0.0 4.7414 4.7414 75.713 0.0 0.0 0.0 3.5976871718779364 3.7628749457997657 3.5976871718779364 2.644583501388276 0 0.8494850021680094 0.8239087409443188 2.110924374808178 0.0 {NN|[MP]|[D{I|L}]|[EV]}T{I|L}TR{I|L}T{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T];{NN|[MP]|[D{I|L}]|[EV]}T{I|L}{I|L}ASVT{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGPSVT{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T];{NN|[MP]|[D{I|L}]|[EV]}T{I|L}TR{I|L}TSN[Q{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GPSVT{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}RPSVT{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VG{I|L}PSVT{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T];{NN|[MP]|[D{I|L}]|[EV]}T{I|L}{I|L}ASVTSN[Q{I|L}];{NN|[MP]|[D{I|L}]|[EV]}TT{I|L}R{I|L}T{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GPSVTSN[Q{I|L}] 4.7414;4.5489;4.4795;4.4675;4.4332;4.3433;4.3423;4.2749;4.2584;4.1593 -;-;-;-;-;-;-;-;-;- 8785 1 1.554 106661.1 1.0 13862 5824 19672 HBL1_DMSO_200M_050219_1,19688 HBL1_DMSO_200M_050219_1,19688,PYMIRPRPFTP False False LPYVGPSVTPMTI 94.879879 687.871936023235 5557255.0 19672.0 ENST00000487440.5_1_3:47281337-47324087:-|nuORF;;ENSG00000088727|ENST00000684063|KIF9;;ENST00000484629.1_1_3:47307469-47316817:-|nuORF;;nc|ENSG00000088727|Q9HAQ2-2|KIF9 6.329359531402588 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19689 94.894 800.0 122940.0 25 0 6541.6 -1 0 124 833.6346313357353 0 833.6346313357353 PEAK CID FTMS 0 0 0 -1 0 17 3 VET{I|L}{M(Oxidation (M))|F}P 6 -1 28.99 0.0 0.0 1.7408 0.0 0.0 850.7971219689031 125.07248865299064 975.8696106218936 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 VET{I|L}{M(Oxidation (M))|F}P 1.7408 - 134 + 1 1.554 67991.1 0.5899999737739563 13863 5824 19672 HBL1_DMSO_200M_050219_1,19689 HBL1_DMSO_200M_050219_1,19689, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19690 94.903 476.0 293260.0 25 0 18144.0 -1 0 106 753.3822896590655 2257.1250395773964 3 753.7187988162041 MULTI CID FTMS 0 0 0 19672 81095.109375 0.3494576965319834 -1 0.1210174560546875 18 3 [NP]N{I|L}{I|L}[CS]{I|L}{I|L}{I|L}N 11 -1 51.33 0.0 0.0 2.2741 0.0 0.0 0.0 1059.4608927678637 1059.4608927678637 24.29152536072809 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.6861818737241735 [NP]N{I|L}{I|L}[CS]{I|L}{I|L}{I|L}N 2.2741 - 3870 1 1.554 102387.5 1.0 13864 5824 19672 HBL1_DMSO_200M_050219_1,19690 HBL1_DMSO_200M_050219_1,19690, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19692 94.908 32.0 2490000.0 25 0 403180.0 + 35803 SVITQVFHV 9 88 515.2889255607477 1028.5632981882952 2 515.2889282107353 MULTI CID FTMS 0 0 0 19691 1704230.375 0.9484109030250164 1 -0.1775665283203125 1 Unmodified _SVITQVFHV_ ENSG00000115677|ENST00000310931|HDLBP;nc|ENSG00000115677|Q00341-2|HDLBP 61.357469665136826 0.0253304979873734 3 [VS]{I|L}TQV{M(Oxidation (M))|F}[HV] 9 0 + 82.003 0.0 0.0 7.9726 7.9726 95.181 0.0 0.0 0.0 32.671955026877754 7.147642715192504 7.147642715192504 14.208187539523747 0 1.0387254899964358 2.0 0.7742275032520141 0.5 + + [VS]{I|L}TQV{M(Oxidation (M))|F}[HV];[VS]{I|L}T[AG]V{M(Oxidation (M))|F}[HV];[VS][WK]QT{I|L}[PA];[VS]{I|L}E[KA]{M(Oxidation (M))|F}[HV];[VS][WK][AG]T{I|L}[PA];[VS]{I|L}E{[RE]|[WV]}PS{I|L};[VS]{I|L}T{NN|[MP]|[D{I|L}]|[EV]}PVW;[VS][WK]QPV[VS];[VS]{I|L}E{[RE]|[WV]}T[VP];[VS]{I|L}T{NN|[MP]|[D{I|L}]|[EV]}T[PA]{I|L} 7.9726;6.5913;6.1068;5.2531;5.2116;5.1761;5.002;4.803;4.7892;4.6698 +;-;-;-;-;-;-;-;-;- + 1133 + 1 1.553 65843.1 1.0 13865 5825 19691 HBL1_DMSO_200M_050219_1,19692 HBL1_DMSO_200M_050219_1,19692,SVITQVFHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19693 94.909 43.0 1427700.0 25 0 266090.0 + 6133 DSYPVVNLI 9 86 510.2745625487382 1018.5345721642764 2 510.2752563357353 MULTI CID FTMS 0 0 0 19691 1164028.375 1.0 0 0.0 2 Unmodified _DSYPVVNLI_ ENSG00000188566|ENST00000684003|NDOR1;nc|ENSG00000188566|Q9UHB4-2|NDOR1;nc|ENSG00000188566|Q9UHB4-3|NDOR1;nc|ENSG00000188566|Q9UHB4-4|NDOR1 34.10243960390752 0.1078313939113124 3 [VP]VN{I|L} 5 4 36.268 0.0 0.0 3.5608 0.0 0.0 0.0 493.1943371391389 493.1943371391389 15.791360164612698 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.25 + [VP]VN{I|L} 3.5608 + + 146 1 1.553 54227.4 1.0 13866 5825 19691 HBL1_DMSO_200M_050219_1,19693 HBL1_DMSO_200M_050219_1,19693,DSYPVVNLI True True DSYPVVNLI 94.908964 510.275256335735 19938694.0 19691.0 nc|ENSG00000188566|Q9UHB4-3|NDOR1;;ENSG00000188566|ENST00000684003|NDOR1;;nc|ENSG00000188566|Q9UHB4-2|NDOR1;;nc|ENSG00000188566|Q9UHB4-4|NDOR1 4.572777430216472 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19694 94.911 103.0 683620.0 25 0 83656.0 + 18272 KVIEINPYLL 10 89 601.363453857154 1200.712354781108 2 601.3638183474541 MULTI CID FTMS 0 0 0 19691 546247.375 0.7240108671736866 1 -0.1775665283203125 3 Unmodified _KVIEINPYLL_ ENSG00000100804|ENST00000361611|PSMB5;ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000100804|P28074-2|PSMB5;nc|ENSG00000204264|P28062-2|PSMB8 38.61474834105838 0.1721950110283317 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}{I|L}PY{I|L}{I|L} 10 4 + 62.497 0.0 0.0 5.205 5.205 89.018 0.0 0.0 0.0 4.941417530911707 33.29879603777161 4.941417530911707 41.81817068321723 0 0.805462187404089 2.0 0.3807196863200844 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}{I|L}PY{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[KA][VS]D{I|L}[VP] 5.205;1.7222 -;- 248 1 1.553 56243.7 1.0 13867 5825 19691 HBL1_DMSO_200M_050219_1,19694 HBL1_DMSO_200M_050219_1,19694,KVIEINPYLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19695 94.916 245.0 247510.0 25 0 41828.0 + 32386 RYRQKRKQRQL 11 90 520.6503165267848 1558.929120180554 3 520.6503784060478 MULTI CID FTMS 0 0 0 19691 383651.53125 1.0 0 0.0 4 Unmodified _RYRQKRKQRQL_ REV__ENSG00000159450|ENST00000614923|TCHH 0.0948413911109767 0.8747004676205551 3 {I|L} 1 -1 12.474 0.0 0.0 0.80018 0.0 0.0 1427.833857584654 0.0 1427.833857584654 0.0 1.8783180698044253 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80018 + + 53 + 1 1.553 56639.3 1.0 13868 5825 19691 HBL1_DMSO_200M_050219_1,19695 HBL1_DMSO_200M_050219_1,19695,RYRQKRKQRQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19696 94.918 100.0 877780.0 25 0 152900.0 + 13848 HVIDLDDATFL 11 109 629.8191891432107 1257.6238253532213 2 629.8194457888603 MULTI CID FTMS 0 0 0 19691 353253.4375 0.2344992796228996 -2 0.24468994140625 5 Unmodified _HVIDLDDATFL_ ENSG00000152219|ENST00000282032|ARL14EP 65.23502041540118 0.047899150100457 3 [HV]{I|L}D{I|L}DDAT{M(Oxidation (M))|F}{I|L} 11 0 + 79.685 0.0 0.0 6.3361 6.3361 92.3 0.0 0.0 0.0 15.606673061697364 58.258210839702144 15.606673061697364 27.201593034059563 0 0.6989700043360187 1.3979400086720375 1.1505149978319906 0.0 + + [HV]{I|L}D{I|L}DDAT{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}DDAT{M(Oxidation (M))|F}{I|L};[HV]{I|L}D{I|L}D{[SA]|[TG]}E{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}DWT{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}D{[SA]|[TG]}E{M(Oxidation (M))|F}{I|L};[{I|L}A][YK]{[C(Carbamidomethyl (C))G]|[NC]}WT{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[RP][HC]E{M(Oxidation (M))|F}{I|L} 6.3361;4.1732;4.0115;3.3917;1.8486;1.4745;0.90467 +;-;-;-;-;-;- + 472 1 1.553 70762.3 1.0 13869 5825 19691 HBL1_DMSO_200M_050219_1,19696 HBL1_DMSO_200M_050219_1,19696,HVIDLDDATFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19697 94.921 133.0 489860.0 25 0 33928.0 + 21347 LPFFREMNV 9 89 576.7973583615745 1151.580163789949 2 576.7977172732353 MULTI CID FTMS 0 0 0 19691 336537.6875 1.0 0 0.0 6 Unmodified _LPFFREMNV_ ENSG00000085552|ENST00000368094|IGSF9;ENST00000493195.5_1_1:159897137-159898861:-|nuORF;ENST00000496645.5_1_1:159897137-159899822:-|nuORF;nc|ENSG00000085552|Q9P2J2-2|IGSF9 21.53697664764585 0.2571576504437394 3 {I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4 5 53.32 0.0 0.0 4.6302 0.0 0.0 0.0 644.2866304986936 644.2866304986936 33.02984905363358 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 + {I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4.6302 + + 117 + 1 1.553 58359.4 1.0 13870 5825 19691 HBL1_DMSO_200M_050219_1,19697 HBL1_DMSO_200M_050219_1,19697,LPFFREMNV False True LPFFREMNV 94.92062 576.797717273235 2799540.0 19691.0 ENST00000496645.5_1_1:159897137-159899822:-|nuORF;;ENSG00000085552|ENST00000368094|IGSF9;;nc|ENSG00000085552|Q9P2J2-2|IGSF9;;ENST00000493195.5_1_1:159897137-159898861:-|nuORF 5.469258149464925 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19698 94.933 723.0 401510.0 25 0 53366.0 + 37552 TLIDLPGITKV 11 169 585.3613991391333 1168.7082453450664 2 585.3622924685478 MULTI CID FTMS 0 0 0 19691 316272.75 1.0 0 0.0 7 Unmodified _TLIDLPGITKV_ ENSG00000079805|ENST00000389253|DNM2;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000079805|P50570-3|DNM2;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000197959|Q9UQ16-2|DNM3;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16|DNM3 85.76441949171179 0.0033696626484081 3 [{I|L}T]{I|L}D{I|L}PG{I|L}TKV 11 0 + 91.078 0.0 0.0 7.7931 7.7931 84.143 0.0 0.0 0.0 25.935690226185628 1.9979699396833297 1.9979699396833297 1.9979699396833297 0 1.579689690656103 2.0 1.341129063296272 0.5451140161145328 + + [{I|L}T]{I|L}D{I|L}PG{I|L}TKV;[{I|L}T]{I|L}D{I|L}PG{I|L}KS{I|L};[{I|L}T]{I|L}D{I|L}PG{I|L}KTV;[{I|L}T]{I|L}D{I|L}V[PA]TKV;[{I|L}T]{I|L}D{I|L}V[PA]KS{I|L};[{I|L}T]{I|L}D{I|L}V[PA]KTV;[{I|L}T]{I|L}D{I|L}P[RK]T{I|L};[{I|L}T]{I|L}VEPG{I|L}TKV;[{I|L}T]{I|L}VEPG{I|L}KS{I|L};[{I|L}T]{I|L}VEPG{I|L}KTV 7.7931;7.6221;7.4323;7.134;6.963;6.7732;6.5369;6.5325;6.3616;6.1717 +;-;-;-;-;-;-;-;-;- + 7980 + 1 1.553 213033.8 1.0 13871 5825 19691 HBL1_DMSO_200M_050219_1,19698 HBL1_DMSO_200M_050219_1,19698,TLIDLPGITKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19699 94.938 257.0 370100.0 25 0 92983.0 + 33441 SIAQISLLL 9 121 479.302637453611 956.590721974022 2 479.3024474978447 MULTI CID FTMS 0 0 0 19691 309826.6875 1.0 0 0.0 8 Unmodified _SIAQISLLL_ ENSG00000172742|ENST00000641962|OR4D9 56.17704186161178 0.0281986971544335 3 {[TV]|[{I|L}S]}QA{I|L}S{I|L}{I|L}{I|L} 9 2 + 73.835 0.0 0.0 7.7185 7.7185 81.382 0.0 0.0 0.0 16.083394747888384 7.147642715192504 7.147642715192504 0.4968123769230459 0 0.4247425010840047 2.0 1.8494850021680087 0.0 {[TV]|[{I|L}S]}QA{I|L}S{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}AQS{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}AGA{I|L}S{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}AQ{I|L}S{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}QA{I|L}{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}AQ{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}AGA{I|L}{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}A{I|L}QS{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}A[AG]S{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}AQ{I|L}{I|L}S{I|L}{I|L} 7.7185;7.6666;7.5179;7.0725;7.0118;6.9598;6.8112;6.7831;6.704;6.3657 -;-;-;+;-;-;-;-;-;- + 1753 1 1.553 77369.9 1.0 13872 5825 19691 HBL1_DMSO_200M_050219_1,19699 HBL1_DMSO_200M_050219_1,19699,SIAQISLLL True True SIAQISLLL 94.937941 479.302447497845 1832529.875 19691.0 ENSG00000172742|ENST00000641962|OR4D9 2.101384798685709 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19700 94.952 785.0 426340.0 25 0 23145.0 + -1 LPPLVPAI 8 171 820.0558450824909 2457.1457058476726 3 820.3911010622978 MULTI CID FTMS 0 0 0 19691 247557.640625 1.0 0 0.0 9 ENSG00000089154|ENST00000300648|GCN1 3 {[QN]|[E{I|L}]|[KN]}[H{I|L}]VAY{I|L}E{I|L}VNY 13 -1 71.873 0.0 0.0 2.925 0.0 0.0 0.0 897.3020113580686 897.3020113580686 43.96082806091884 0.0 0.0 0.0 0 1.774227503252014 1.6989700043360187 0.0 1.4802046884880935 {[QN]|[E{I|L}]|[KN]}[H{I|L}]VAY{I|L}E{I|L}VNY 2.925 - 6884 + 1 1.553 224666.4 1.0 13873 5825 19691 HBL1_DMSO_200M_050219_1,19700 HBL1_DMSO_200M_050219_1,19700, False False LPPLVPAI 94.951535 820.0571 8395844.0 19691.0 ENSG00000089154|ENST00000300648|GCN1 0.8280854225158691 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19701 94.955 201.0 590610.0 25 0 89866.0 + 23983 LVVDIMHGL 9 121 498.7803921463434 995.5462313594868 2 498.7807800173759 MULTI CID FTMS 0 0 0 19691 234078.515625 1.0 0 0.0 10 Unmodified _LVVDIMHGL_ ENSG00000158417|ENST00000289371|EIF5B 32.116972079565 0.1225432171549407 3 [{I|L}V]VD{I|L}M 6 3 43.121 0.0 0.0 4.3314 0.0 0.0 0.0 322.15258915060264 322.15258915060264 27.749905194181675 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}V]VD{I|L}M 4.3314 + + 660 + 1 1.553 96932.4 1.0 13874 5825 19691 HBL1_DMSO_200M_050219_1,19701 HBL1_DMSO_200M_050219_1,19701,LVVDIMHGL True True LVVDIMHGL 94.955368 498.780780017376 1429702.625 19691.0 ENSG00000158417|ENST00000289371|EIF5B 4.897250175476074 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19702 94.962 394.0 246220.0 25 0 12952.0 + 43425 WRNWRWWQER 10 129 801.8931814766219 1601.7718100200436 2 801.8953735232353 MULTI CID FTMS 0 0 0 19691 220806.46875 1.0 0 0.0 11 Unmodified _WRNWRWWQER_ REV__ENST00000510393.5_1_1:16083148-16084686:+|nuORF 0.4007161486938917 0.7247829448918255 3 {NN|[MP]|[D{I|L}]|[EV]}EVPV{[YC]|[HE]}{M(Oxidation (M))|F}[YE]{I|L}{I|L} 13 -1 + 55.551 0.0 0.0 3.4681 3.4681 75.085 0.0 0.0 0.0 4.68765315847925 6.773367169273747 4.68765315847925 4.68765315847925 0 1.0682503180159344 1.5228787452803376 0.3807196863200844 0.6549471895720985 {NN|[MP]|[D{I|L}]|[EV]}EVPV{[YC]|[HE]}{M(Oxidation (M))|F}[YE]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}DVPV{[YC]|[HE]}{M(Oxidation (M))|F}[YE]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}DPV{[YC]|[HE]}{M(Oxidation (M))|F}[YE]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}VEPV{[YC]|[HE]}{M(Oxidation (M))|F}[YE]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}VDPV{[YC]|[HE]}{M(Oxidation (M))|F}[YE]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}EVPV[C(Carbamidomethyl (C))H]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}VPEV{[YC]|[HE]}{M(Oxidation (M))|F}[YE]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}DVPV[C(Carbamidomethyl (C))H]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}DPV[C(Carbamidomethyl (C))H]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}VEPV[C(Carbamidomethyl (C))H]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L} 3.4681;3.1755;2.7941;2.7028;2.5014;2.452;2.3107;2.1593;1.7779;1.6867 -;-;-;-;-;-;-;-;-;- 3775 1 1.553 69650.2 1.0 13875 5825 19691 HBL1_DMSO_200M_050219_1,19702 HBL1_DMSO_200M_050219_1,19702,WRNWRWWQER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19703 94.976 800.0 256770.0 25 0 8081.1 + 45690 YWPTYTPMEV 10 195 643.7910168561716 1285.5674807791431 2 643.7922851443291 MULTI CID FTMS 0 0 0 19691 174809.5625 0.2718931889951885 3 -0.3920440673828125 12 Unmodified _YWPTYTPMEV_ ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A 58.6788170122104 0.0400518768368984 3 [TP]T{I|L}G{I|L}{I|L}TN{I|L}D 11 10 47.775 0.0 0.0 3.7163 0.0 0.0 0.0 143.90864223838062 143.90864223838062 16.89804072882645 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.9876954943324544 0.75 [TP]T{I|L}G{I|L}{I|L}TN{I|L}D 3.7163 - 3297 1 1.553 154254.2 0.8199999928474426 13876 5825 19691 HBL1_DMSO_200M_050219_1,19703 HBL1_DMSO_200M_050219_1,19703,YWPTYTPMEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19704 94.991 800.0 246860.0 25 0 23248.0 + 24789 MPIKINLI 8 189 471.2962775002167 940.5780020672336 2 471.2971679568291 MULTI CID FTMS 0 0 0 19691 142548.890625 0.0030817946138804 22 -2.537055969238281 13 Unmodified _MPIKINLI_ ENSG00000134001|ENST00000256383|EIF2S1 38.15118350030904 0.2652218139009398 3 MP{I|L}K{I|L}N{I|L}{I|L} 8 0 + 41.258 0.0 0.0 4.3865 4.3865 80.494 0.0 0.0 0.0 1.1271152813779963 7.143331241078172 1.1271152813779963 7.664324865216216 0 0.6624379954164593 1.0969100130080565 0.0 0.0 + + MP{I|L}K{I|L}N{I|L}{I|L};[{I|L}P]K{I|L}NM{I|L}{I|L};[VG]A{I|L}KPM{I|L}{I|L};MP{I|L}[R{I|L}]RR;[{I|L}P]K{I|L}MN{I|L}{I|L};[{I|L}P]K{I|L}GGM{I|L}{I|L};[{I|L}A]Y{I|L}VH{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KPM{I|L}{I|L};[{I|L}P]K{I|L}AAC{I|L}{I|L};{I|L}{I|L}NKPM{I|L}{I|L} 4.3865;3.5716;2.7495;2.7413;2.7396;2.5869;2.5849;2.4921;2.0749;2.0232 +;-;-;-;-;-;-;-;-;- + 1043 + 1 1.553 150656.7 0.6100000143051147 13877 5825 19691 HBL1_DMSO_200M_050219_1,19704 HBL1_DMSO_200M_050219_1,19704,MPIKINLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19705 95.005 800.0 218590.0 25 0 18505.0 + 31095 RLLEIDPYL 9 186 566.3246187008157 0 566.3248779177666 PEAK CID FTMS 0 0 0 19691 146152.171875 1.0 0 0.0 14 Unmodified _RLLEIDPYL_ ENSG00000114480|ENST00000429644|GBE1 43.77239144664712 0.0487019148086553 3 YPD{I|L}E 5 8 44.519 0.0 0.0 3.9375 0.0 0.0 131.0949668783531 379.2468355768188 510.3418024551719 0.0 0.0 0.0 0.0 0 1.4698565171985376 0.0 0.6861818737241735 0.0 YPD{I|L}E 3.9375 - 318 + 1 1.553 138503.2 0.7400000095367432 13878 5825 19691 HBL1_DMSO_200M_050219_1,19705 HBL1_DMSO_200M_050219_1,19705,RLLEIDPYL True True RLLEIDPYL 95.005105 566.324877917767 1318825.5 19691.0 ENSG00000114480|ENST00000429644|GBE1 4.371778647104899 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19706 95.019 800.0 204000.0 25 0 11038.0 -1 0 158 940.4513485087988 1878.8881440843973 2 940.950244128704 MULTI CID FTMS 0 0 0 19691 129025.2734375 0.8300166644268514 7 -0.8267135620117188 15 3 [{I|L}T]M[HK]{I|L}VV 8 -1 30.667 0.0 0.0 1.6322 0.0 0.0 0.0 954.3340418717596 954.3340418717596 5.608468120913805 0.0 0.0 0.0 0 0.0 2.0 0.4291746928241126 0.0 [{I|L}T]M[HK]{I|L}VV 1.6322 - 4383 1 1.553 102605.2 0.7400000095367432 13879 5825 19691 HBL1_DMSO_200M_050219_1,19706 HBL1_DMSO_200M_050219_1,19706, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19707 95.034 800.0 88618.0 25 0 19268.0 -1 0 98 1165.369799792767 0 1165.369799792767 PEAK CID FTMS 0 0 0 -1 0 16 3 R 1 -1 5.4846 0.0 0.0 0.23552 0.0 0.0 1424.3155750720591 745.2702730768186 2169.5858481488776 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.23552 - 21 + 1 1.553 50834.4 0.6499999761581421 13880 5825 19691 HBL1_DMSO_200M_050219_1,19707 HBL1_DMSO_200M_050219_1,19707, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19708 95.048 800.0 235380.0 25 0 26097.0 + 9126 FFPEYTHQLF 10 160 664.8199341233047 1327.6253153134094 2 664.8214599490166 MULTI CID FTMS 0 0 0 19691 143021.515625 1.0 0 0.0 17 Unmodified _FFPEYTHQLF_ ENSG00000128708|ENST00000264108|HAT1 56.17704186161178 0.0466144807663799 3 [EP]YTHQ{I|L} 7 3 47.065 0.0 0.0 3.5451 0.0 0.0 0.0 456.1943109761936 456.1943109761936 4.26915572238704 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.2971062485323517 0.6382104921644451 + [EP]YTHQ{I|L} 3.5451 + + 2799 1 1.553 138495.6 0.8299999833106995 13881 5825 19691 HBL1_DMSO_200M_050219_1,19708 HBL1_DMSO_200M_050219_1,19708,FFPEYTHQLF True True FFPEYTHQLF 95.047824 664.821459949017 4996526.0 19691.0 ENSG00000128708|ENST00000264108|HAT1 8.040443897247314 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19709 95.062 800.0 165410.0 25 0 13368.0 -1 0 166 936.436731181322 1870.858909429444 2 936.9385864138604 MULTI CID FTMS 0 0 0 19691 126545.5859375 0.5903201595622708 -3 0.36590576171875 18 3 VS{I|L} 3 -1 28.874 0.0 0.0 1.5433 0.0 0.0 1553.6633050366686 0.0 1553.6633050366686 0.0 6.546686589193957 0.0 0.0 0 0.5 0.0 0.5941876774005248 0.0 VS{I|L} 1.5433 - 3393 + 1 1.553 86052.8 0.9200000166893004 13882 5825 19691 HBL1_DMSO_200M_050219_1,19709 HBL1_DMSO_200M_050219_1,19709, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19710 95.077 800.0 154080.0 25 0 12399.0 -1 SLVHTARCCL 10 185 608.797484581431 1215.580416229662 2 608.7983276247978 MULTI CID FTMS 0 0 0 19691 132260.28125 0.7347202182602146 7 -0.8267135620117188 19 2 Carbamidomethyl (C) _SLVHTARC(Carbamidomethyl (C))C(Carbamidomethyl (C))L_ ENSG00000079435|ENST00000244289|LIPE;nc|ENSG00000079435|Q05469-2|LIPE 17.11289562659939 0.5604042439455784 3 R[C(Carbamidomethyl (C))S]W 4 -1 23.812 0.0 0.0 1.9589 0.0 0.0 608.3216419904312 0.0 608.3216419904312 0.0 4.709996167691553 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.3252574989159953 R[C(Carbamidomethyl (C))S]W 1.9589 - 1228 1 1.553 93969.3 0.7900000214576721 13883 5825 19691 HBL1_DMSO_200M_050219_1,19710 HBL1_DMSO_200M_050219_1,19710,SLVHTARCCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19711 95.08 199.0 489900.0 25 0 69575.0 + 12853 GVVIHLPGL 9 95 452.78398717330725 903.5534214134144 2 452.7835876345634 MULTI CID FTMS 0 0 0 19691 131084.546875 0.3300113918961764 -3 0.36590576171875 20 Unmodified _GVVIHLPGL_ ENSG00000035687|ENST00000366535|ADSS2;ENSG00000185100|ENST00000330877|ADSS1;ENST00000557582.5_1_14:105204639-105207027:+|nuORF;ENST00000588022.1_1_17:33786947-33787550:-|nuORF;nc|ENSG00000185100|Q8N142-2|ADSS1 67.41302359171755 0.0220989861905124 3 [VG]V{I|L}H{I|L}PG{I|L} 9 0 + 48.928 0.0 0.0 5.415 5.415 89.935 0.0 0.0 0.0 13.843640422298598 12.64186527911879 12.64186527911879 48.92774030171955 0 1.5317183090963749 2.0 0.0 0.0 + + [VG]V{I|L}H{I|L}PG{I|L} 5.415 + + 178 + 1 1.553 79415.8 1.0 13884 5825 19691 HBL1_DMSO_200M_050219_1,19711 HBL1_DMSO_200M_050219_1,19711,GVVIHLPGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19713 95.085 17.0 3204400.0 25 0 401980.0 + 14324 IEQDLLTSTDT 11 64 618.3038637065497 1234.5931744798993 2 618.3044921755791 MULTI CID FTMS 0 0 0 19712 1490980.625 0.1353819855538008 1 -0.0741806030273437 1 Unmodified _IEQDLLTSTDT_ REV__ENSG00000137145|ENST00000434457|DENND4C;REV__ENST00000602708.1_1_9:19230809-19276502:+|nuORF;REV__nc|ENSG00000137145|Q5VZ89-3|DENND4C;REV__nc|ENSG00000137145|Q5VZ89-5|DENND4C;REV__nc|ENSG00000137145|Q5VZ89|DENND4C 18.373094154950223 0.6529654022026722 3 [{I|L}A]GED{I|L}A{I|L} 8 -1 59.144 0.0 0.0 4.7905 0.0 0.0 0.0 449.1568701188243 449.1568701188243 45.33147027177972 0.0 0.0 0.0 0 0.7302046884880937 2.0 1.110924374808178 0.0 [{I|L}A]GED{I|L}A{I|L} 4.7905 - 404 1 1.553 46122.9 1.0 13885 5826 19712 HBL1_DMSO_200M_050219_1,19713 HBL1_DMSO_200M_050219_1,19713,IEQDLLTSTDT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19714 95.086 31.0 3662300.0 25 0 338200.0 + 1202 AIDPHLLLSV 10 116 539.317708364079 1076.6208637949578 2 539.3190795779228 MULTI CID FTMS 0 0 0 19712 837639.875 0.1379149125584353 1 -0.0741806030273437 2 Unmodified _AIDPHLLLSV_ ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A 75.76082778847304 0.0187510588500744 3 [{I|L}A]DY{I|L}A{I|L}{I|L}SV 10 3 + 83.001 0.0 0.0 7.7094 7.7094 83.516 0.0 0.0 0.0 12.29731134798476 15.026975159433531 12.29731134798476 1.7609125905568137 0 1.4916440611282624 2.0 0.5 0.0 [{I|L}A]DY{I|L}A{I|L}{I|L}SV;[{I|L}A]DYA{I|L}{I|L}{I|L}SV;[{I|L}A]DY{I|L}{I|L}A{I|L}SV;[{I|L}A]DY{I|L}A{I|L}S{I|L}V;[{I|L}A][Y{I|L}]DA{I|L}{I|L}SV;[{I|L}A]DYA{I|L}{I|L}S{I|L}V;[H{I|L}]P{I|L}DA{I|L}{I|L}SV;[{I|L}A][Y{I|L}]{I|L}DA{I|L}SV;[H{I|L}]P{I|L}{I|L}DA{I|L}SV;[{I|L}A][Y{I|L}]{I|L}W{I|L}SV 7.7094;7.5458;7.2662;6.7557;6.6917;6.5921;6.5672;6.5281;6.4036;6.3646 -;-;-;-;-;-;-;-;-;- 2891 1 1.553 91245.8 1.0 13886 5826 19712 HBL1_DMSO_200M_050219_1,19714 HBL1_DMSO_200M_050219_1,19714,AIDPHLLLSV True True AIDPHLLLSV 95.086396 539.319079577923 74151544.0 19712.0 ENSG00000121892|ENST00000303538|PDS5A;;nc|ENSG00000121892|Q29RF7-3|PDS5A 6.99596659342448 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19715 95.088 43.0 3400100.0 25 0 422740.0 + + 16282 MPRDILIVV 9 96 528.3177497276434 0 528.3178588747978 PEAK CID FTMS 0 0 0 19712 992468.625 0.4306226066876829 1 -0.0741806030273437 3 Unmodified _IVWPCLLLV_ nc|ENSG00000171766|P50440-3|GATM;nc|ENSG00000171766|P50440-2|GATM;ENSG00000171766|ENST00000396659|GATM 28.17323086031832 0.1269780855172776 3 V{I|L}{I|L}{I|L}D 5 -1 32.981 0.0 0.0 3.1273 0.0 0.0 117.07944677079918 381.1723116510376 498.2517584218367 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 V{I|L}{I|L}{I|L}D 3.1273 - 178 + 1 1.553 130532.5 1.0 13887 5826 19712 HBL1_DMSO_200M_050219_1,19715 HBL1_DMSO_200M_050219_1,19715,IVWPCLLLV False False MPRDILIVV 95.087611 528.317858874798 25432280.0 19712.0 nc|ENSG00000171766|P50440-3|GATM;;nc|ENSG00000171766|P50440-2|GATM;;ENSG00000171766|ENST00000396659|GATM 3.744331518809001 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19716 95.089 41.0 4358100.0 25 0 636380.0 + 31285 RLYDGLFKVI 10 88 612.3612518503202 1222.7079507674405 2 612.3610107302666 MULTI CID FTMS 0 0 0 19712 846044.875 0.1659901927758072 1 -0.0741806030273437 4 Unmodified _RLYDGLFKVI_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 51.76506608216692 0.0697913821149828 3 G{I|L}{M(Oxidation (M))|F}KV{I|L} 6 4 63.153 0.0 0.0 5.165 0.0 0.0 547.2759112319109 0.0 547.2759112319109 0.0 54.815286267955926 0.0 0.0 0 1.5189301784845295 0.0 0.0 0.3807196863200844 + G{I|L}{M(Oxidation (M))|F}KV{I|L} 5.165 + + 269 1 1.553 137827.3 1.0 13888 5826 19712 HBL1_DMSO_200M_050219_1,19716 HBL1_DMSO_200M_050219_1,19716,RLYDGLFKVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19717 95.091 96.0 2980800.0 25 0 292260.0 + + 3060 AVLAVLPRL 9 100 476.3211159216749 950.6276789101496 2 476.3211547732353 MULTI CID FTMS 0 0 0 19712 692824.25 0.3405874620835954 -1 0.1775665283203125 5 Unmodified _AVLLGLPRL_ ENST00000463906.1_1_1:43630116-43636618:-|nuORF;ENSG00000117395|ENST00000236051|EBNA1BP2 77.98433622928108 0.0180125044636492 3 {[VA]|[{I|L}G]}{I|L}AV{I|L}PR{I|L} 9 -1 + 81.718 0.0 0.0 8.5963 8.5963 84.088 0.0 0.0 0.0 20.96279041616178 1.250612633917001 1.250612633917001 1.250612633917001 0 1.6549471895720984 2.0 0.0 1.055462187404089 {[VA]|[{I|L}G]}{I|L}AV{I|L}PR{I|L};{[VA]|[{I|L}G]}{I|L}AV{I|L}{I|L}[RP];{[VA]|[{I|L}G]}{I|L}{I|L}G{I|L}PR{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}G{I|L}{I|L}[RP];{[VA]|[{I|L}G]}{I|L}A{I|L}VPR{I|L};{[VA]|[{I|L}G]}{I|L}A{I|L}V{I|L}[RP];{[VA]|[{I|L}G]}{I|L}{I|L}AVPR{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}AV{I|L}[RP] 8.5963;8.4647;8.1541;8.0226;7.5115;7.3799;7.0693;6.9378 -;-;+;-;-;-;-;- + 1011 + 1 1.553 218726.2 1.0 13889 5826 19712 HBL1_DMSO_200M_050219_1,19717 HBL1_DMSO_200M_050219_1,19717,AVLLGLPRL False False AVLAVLPRL 95.090896 476.321154773235 85491768.0 19712.0 ENST00000463906.1_1_1:43630116-43636618:-|nuORF;;ENSG00000117395|ENST00000236051|EBNA1BP2 5.194466670354207 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19718 95.093 71.0 329430.0 25 0 25919.0 + -1 GQSLVVRSMSL 11 55 596.8206432555494 1191.626733577899 2 596.8206664919853 MULTI CID FTMS 0 0 0 19712 584241.9375 0.2183363131933289 1 -0.0741806030273437 6 Oxidation (M) _GQSLVVRSM(Oxidation (M))SL_ REV__ENSG00000129214|ENST00000380450|SHBG;REV__nc|ENSG00000129214|P04278-5|SHBG 9.38312468134398 0.8308777417566128 3 S{I|L} 2 -1 19.253 0.0 0.0 1.6156 0.0 0.0 973.4995343364908 0.0 973.4995343364908 0.0 13.767959391884546 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 S{I|L} 1.6156 + + 9 + 1 1.553 22833.3 1.0 13890 5826 19712 HBL1_DMSO_200M_050219_1,19718 HBL1_DMSO_200M_050219_1,19718,GQSLVVRSMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19719 95.094 49.0 383230.0 25 0 32294.0 -1 IQRPCRKSV 9 49 572.3233133078575 1142.6320736825148 2 572.3242675662041 MULTI CID FTMS 0 0 0 19712 623313.25 0.2102399308412015 -5 0.6496658325195312 7 Carbamidomethyl (C) _IQRPC(Carbamidomethyl (C))RKSV_ ENSG00000132911|ENST00000255262|NMUR2 12.531546534597751 0.4974689918368763 3 [Q{I|L}]{[WT]|[RM]}[PS]{I|L}{I|L}SV 10 -1 [Q{I|L}]{[WT]|[RM]}[PS]{I|L}{I|L} + + 17.691 9.4986 1.0121 1.5482 1.5482 48.557 0.0 0.0 0.0 0.0 -5.900436963662731 -5.900436963662731 0.0 0 0.0 0.0 0.2742275032520141 0.0 [Q{I|L}]{[WT]|[RM]}[PS]{I|L}{I|L}SV 1.5482 - 37 + 1 1.553 21174.7 1.0 13891 5826 19712 HBL1_DMSO_200M_050219_1,19719 HBL1_DMSO_200M_050219_1,19719,IQRPCRKSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19720 95.096 115.0 268090.0 25 0 24425.0 + 10395 FSWEGAFQHV 10 62 604.2802549701255 1206.545957007051 2 604.2803832888603 MULTI CID FTMS 0 0 0 19712 444464.78125 0.0918788441138978 1 -0.0741806030273437 8 Unmodified _FSWEGAFQHV_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000434365.1_1_X:114938170-114938437:+|nuORF;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 43.77239144664712 0.1177314611616471 3 {M(Oxidation (M))|F}SWEQ{M(Oxidation (M))|F}Q[HV] 9 2 + 57.357 0.0 0.0 4.7538 4.7538 83.529 0.0 0.0 0.0 51.871987629411294 7.147642715192504 7.147642715192504 9.208187539523747 0 0.0 0.0 0.4247425010840047 0.8494850021680094 {M(Oxidation (M))|F}SWEQ{M(Oxidation (M))|F}Q[HV];{M(Oxidation (M))|F}SWE[AG]{M(Oxidation (M))|F}Q[HV];{M(Oxidation (M))|F}SWEQ{M(Oxidation (M))|F}[AG][HV];{M(Oxidation (M))|F}SWE[AG]{M(Oxidation (M))|F}[AG][HV];[WE][{I|L}T]QE[VS]SE;{M(Oxidation (M))|F}S{[DA]|[EG]}HH{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[TV]|[{I|L}S]};{M(Oxidation (M))|F}S[VS]HH{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[TV]|[{I|L}S]} 4.7538;3.9906;3.2865;2.527;2.0855;1.7704;1.7704 -;+;-;-;-;-;- + 222 + 1 1.553 28375.5 1.0 13892 5826 19712 HBL1_DMSO_200M_050219_1,19720 HBL1_DMSO_200M_050219_1,19720,FSWEGAFQHV True True FSWEGAFQHV 95.096294 604.28038328886 170344240.0 19712.0 ENSG00000254772|ENST00000329251|EEF1G;;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;;nc|ENSG00000254772|P26641-2|EEF1G;;ENST00000434365.1_1_X:114938170-114938437:+|nuORF 9.877727031707764 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19721 95.1 176.0 968060.0 25 0 96997.0 + 12143 GQLEFRALL 9 132 523.8030309302491 1045.591508927298 2 523.8032714724541 MULTI CID FTMS 0 0 0 19712 322960.5 0.1319139346233412 1 -0.0741806030273437 9 Unmodified _GQLEFRALL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000224411|Q14568|HSP90AA2P 63.960520009940105 0.0238892913700936 3 {[QG]|[NA]}{I|L}E{M(Oxidation (M))|F}RA{I|L}{I|L} 9 0 {[QG]|[NA]} + + 46.458 16.689 9.0171 4.4433 4.4433 53.839 0.0 0.0 0.0 0.0 22.8131198134912 0.0 0.0 0 2.048455006504028 0.0 0.4247425010840047 0.0 + + {[QG]|[NA]}{I|L}E{M(Oxidation (M))|F}RA{I|L}{I|L} 4.4433 + + 1600 + 1 1.553 135508.2 1.0 13893 5826 19712 HBL1_DMSO_200M_050219_1,19721 HBL1_DMSO_200M_050219_1,19721,GQLEFRALL True True GQLEFRALL 95.099728 523.803271472454 30018040.0 19712.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1;;nc|ENSG00000183199|Q58FF7|HSP90AB3P 4.923689842224121 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19722 95.103 144.0 523640.0 25 0 208600.0 -1 0 65 589.3555039062267 1765.04468231888 3 589.3552734255791 MULTI CID FTMS 0 0 0 19712 274564.3125 0.3603976538948532 -1 0.1775665283203125 10 3 [{I|L}V]{M(Oxidation (M))|F}Y 4 -1 6.9549 0.0 0.0 0.39403 0.0 0.0 0.0 1239.742960477336 1239.742960477336 2.517898162424969 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 0.0 [{I|L}V]{M(Oxidation (M))|F}Y 0.39403 - 38 1 1.553 67705.4 1.0 13894 5826 19712 HBL1_DMSO_200M_050219_1,19722 HBL1_DMSO_200M_050219_1,19722, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19723 95.11 398.0 1008600.0 25 0 90367.0 + 10148 FPWSEIRNI 9 172 581.3042992557498 1160.5940455782995 2 581.3072997927666 MULTI CID FTMS 0 0 0 19712 273764.0 0.1670183914450081 -5 0.6496658325195312 11 Unmodified _FPWSEIRNI_ ENSG00000092820|ENST00000367075|EZR;ENSG00000137710|ENST00000645495|RDX;ENSG00000147065|ENST00000360270|MSN;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX 99.7552728972412 0.0110101799492648 3 {I|L}MWSE{I|L}RN{I|L} 9 2 + 107.2 0.0 0.0 9.2371 9.2371 89.727 0.0 0.0 0.0 16.237125054200234 12.525749891599531 12.525749891599531 4.559771852360797 0 1.6886218330464624 2.0 1.360924374808178 0.5649093276264391 {I|L}MWSE{I|L}RN{I|L};{I|L}M{I|L}C(Carbamidomethyl (C))E{I|L}RN{I|L};{I|L}M{[DA]|[EG]}SE{I|L}RN{I|L};{I|L}MWSE{I|L}RGG{I|L};{I|L}MWS{I|L}ERN{I|L};{I|L}MWSE{I|L}RQV;{I|L}M{I|L}[CG]E{I|L}RN{I|L};{I|L}M{I|L}C(Carbamidomethyl (C))E{I|L}RGG{I|L};{M(Oxidation (M))|F}PWSE{I|L}RN{I|L};{I|L}M{I|L}C(Carbamidomethyl (C)){I|L}ERN{I|L} 9.2371;8.8442;8.4437;8.2372;8.169;8.1578;8.0508;7.8443;7.838;7.7761 -;-;-;-;-;-;-;-;+;- + 7522 + 1 1.553 308327.7 1.0 13895 5826 19712 HBL1_DMSO_200M_050219_1,19723 HBL1_DMSO_200M_050219_1,19723,FPWSEIRNI True True FPWSEIRNI 95.109757 581.307299792767 60417444.0 19712.0 nc|ENSG00000137710|P35241-5|RDX;;ENSG00000137710|ENST00000645495|RDX;;ENSG00000147065|ENST00000360270|MSN;;ENSG00000092820|ENST00000367075|EZR;;nc|ENSG00000137710|P35241-4|RDX 6.639999866485596 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19724 95.112 134.0 1737800.0 25 0 243460.0 + 35421 STIVQVLEV 9 158 494.28899382597245 986.5634347187448 2 494.2884094119072 MULTI CID FTMS 0 0 0 19712 230875.328125 0.3172558192183752 -1 0.1775665283203125 12 Unmodified _STIVQVLEV_ ENSG00000142207|ENST00000382751|URB1 88.90359156742426 0.0153595091083554 3 [KC]KVQVSPV 9 5 + 59.821 0.0 0.0 6.0636 6.0636 85.964 0.0 0.0 0.0 5.642492736872597 7.533276666586111 5.642492736872597 7.533276666586111 0 0.2742275032520141 0.0 2.1307196863200843 0.3252574989159953 [KC]KVQVSPV;[KC]KVQVSVP;[KC]KV[AG]VSPV;[KC]KV[AG]VSVP;[KC]KVK[PG]D{I|L};[KC]KVK[PG]EV;[KC]KVK{[DA]|[EG]}PV;[KC]KV{[MG]|[TS]}[KP]P;[KC]KVK{[DA]|[EG]}VP;[KC]R[KA]VSPV 6.0636;5.3;4.8005;4.037;3.6603;3.6603;3.1999;2.9884;2.4363;2.3355 -;-;-;-;-;-;-;-;-;- 1532 + 1 1.553 175931.6 1.0 13896 5826 19712 HBL1_DMSO_200M_050219_1,19724 HBL1_DMSO_200M_050219_1,19724,STIVQVLEV True True ESPVSQPQSPAQIL 95.112479 494.288409411907 67544.84375 19712.0 nc|ENSG00000152818|P46939-3|UTRN;;nc|ENSG00000152818|P46939-2|UTRN;;nc|ENSG00000152818|P46939-4|UTRN;;ENSG00000152818|ENST00000367545|UTRN 0.4362115810314814 3.0 False 14.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19725 95.117 230.0 784970.0 25 0 101550.0 + 20423 LLIENVASL 9 141 486.29224058057 970.56992822794 2 486.2934142947197 MULTI CID FTMS 0 0 0 19712 157853.75 0.0072982609330067 9 -0.9390182495117188 13 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 48.345845343767074 0.0439967357579942 3 {[TV]|[{I|L}S]}AR{I|L}{M(Oxidation (M))|F}[HK] 8 8 + 36.819 0.0 0.0 3.7935 3.7935 78.062 0.0 0.0 0.0 6.478174818886377 5.088395638160378 5.088395638160378 6.695224735135653 0 0.0 1.2218487496163564 0.1139829889124311 0.3494850021680094 {[TV]|[{I|L}S]}AR{I|L}{M(Oxidation (M))|F}[HK];{I|L}{I|L}[WK]{M(Oxidation (M))|F}P[PA];{[SA]|[TG]}{I|L}R{I|L}{M(Oxidation (M))|F}[HK];{[VA]|[{I|L}G]}TR{I|L}{M(Oxidation (M))|F}[HK];[{I|L}T]GR{I|L}{M(Oxidation (M))|F}[HK];{I|L}{I|L}{[NV]|[RG]}T{M(Oxidation (M))|F}[HK];{[QN]|[E{I|L}]|[KN]}NVAAA[RK];{NN|[MP]|[D{I|L}]|[EV]}QV{[NV]|[RG]}[RK];{NN|[MP]|[D{I|L}]|[EV]}N{I|L}{[NV]|[RG]}[RK];{I|L}{I|L}MK[W{I|L}][PA] 3.7935;3.1037;2.8535;2.726;2.5365;2.0734;1.5124;1.4358;1.3043;1.3025 -;-;-;-;-;-;-;-;-;- 1734 1 1.553 144181.6 1.0 13897 5826 19712 HBL1_DMSO_200M_050219_1,19725 HBL1_DMSO_200M_050219_1,19725,LLIENVASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19726 95.127 597.0 583500.0 25 0 59186.0 + 13277 HIPDVITYL 9 211 535.7982164087542 1069.5818798843084 2 535.7982055544853 MULTI CID FTMS 0 0 0 19712 127685.3515625 0.0306757693651447 8 -0.8290557861328125 14 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 48.345845343767074 0.0439967357579942 3 [H{I|L}][DP]V{I|L}TY{I|L} 9 0 + 60.115 0.0 0.0 5.6204 5.6204 81.125 0.0 0.0 0.0 8.492146062090889 14.09256854528806 8.492146062090889 4.216590673155736 0 1.055462187404089 1.5228787452803376 0.5 0.0 + + [H{I|L}][DP]V{I|L}TY{I|L};[H{I|L}][DP]VT{I|L}Y{I|L};[VP]D{I|L}H{I|L}TY{I|L};[VP]DH{I|L}{I|L}TY{I|L};[VP]D{I|L}HT{I|L}Y{I|L};[H{I|L}][DP]VTY{I|L}{I|L};[DP]V{I|L}H{I|L}TY{I|L};[VP]D{I|L}TH{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}[YG]V{I|L}TY{I|L};[{I|L}V]YW{I|L}TY{I|L} 5.6204;5.2262;4.8264;4.4824;4.4322;4.421;4.3778;4.1758;4.1579;4.1317 +;-;-;-;-;-;-;-;-;- + 4907 1 1.553 268092.5 1.0 13898 5826 19712 HBL1_DMSO_200M_050219_1,19726 HBL1_DMSO_200M_050219_1,19726,HIPDVITYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19727 95.141 800.0 389080.0 25 0 27085.0 6733 EDLGQLEYKF 10 202 621.3071454208572 1240.5997379085145 2 621.8089477419853 MULTI CID FTMS 0 0 0 19712 109292.8046875 0.4242426107922484 1 -0.0741806030273437 15 Unmodified _EDLGQLEYKF_ ENSG00000122085|ENST00000391980|MTERF4;ENST00000455202.6_1_2:242033829-242041710:-|nuORF;ENST00000460915.1_1_2:242036606-242041710:-|nuORF;ENST00000493169.1_1_2:242033829-242041710:-|nuORF 12.240655878213236 0.6421556946785427 3 {[DA]|[EG]}{I|L}DV 5 7 24.71 0.0 0.0 1.9917 0.0 0.0 0.0 724.3324240343721 724.3324240343721 1.065694802651148 0.0 0.0 0.0 0 0.2614393726401688 1.154901959985743 0.0 0.0 {[DA]|[EG]}{I|L}DV 1.9917 - 23361 1 1.553 224514.2 0.5600000023841858 13899 5826 19712 HBL1_DMSO_200M_050219_1,19727 HBL1_DMSO_200M_050219_1,19727,EDLGQLEYKF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19728 95.155 800.0 372320.0 25 0 48909.0 + 21955 LPPLVPAI 8 156 410.27058238375855 818.5266118343171 2 410.2704345583916 MULTI CID FTMS 0 0 0 19712 101365.265625 0.2692123984380861 -2 0.301239013671875 16 Unmodified _LPPLVPAI_ ENSG00000089154|ENST00000300648|GCN1 77.1959498837818 0.1016809512730457 3 [{I|L}P]PVAP{I|L}{I|L} 8 3 + 66.094 0.0 0.0 8.0747 8.0747 82.069 0.0 0.0 0.0 20.413705284069223 42.79290666384 20.413705284069223 0.5102999566398125 0 0.75 1.5228787452803376 0.0 0.0 [{I|L}P]PVAP{I|L}{I|L};[{I|L}P]P{I|L}GP{I|L}{I|L};[{I|L}P]VPAP{I|L}{I|L};[{I|L}P]PV{I|L}PA{I|L};[{I|L}P]P{I|L}VPA{I|L};[{I|L}P]VP{I|L}PA{I|L};[{I|L}P]PAVP{I|L}{I|L};[{I|L}P]APVP{I|L}{I|L};[{I|L}P]G[{I|L}P]P{I|L}{I|L};[{I|L}P]P{I|L}[PA]V{I|L} 8.0747;8.0124;7.8596;7.6423;7.58;7.4272;6.853;6.2701;5.7839;5.7216 -;-;-;-;+;-;-;-;-;- + 468 1 1.553 228620.1 0.4399999976158142 13900 5826 19712 HBL1_DMSO_200M_050219_1,19728 HBL1_DMSO_200M_050219_1,19728,LPPLVPAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19730 95.161 144.0 495570.0 25 0 63750.0 + 5730 DPLVPPQLTI 10 114 546.8190718289834 1091.6235907247667 2 546.8183471560478 MULTI CID FTMS 0 0 0 19729 193041.921875 0.370837753434562 5 -0.5749664306640625 1 Unmodified _DPLVPPQLTI_ ENSG00000023228|ENST00000233190|NDUFS1;nc|ENSG00000023228|P28331-2|NDUFS1;nc|ENSG00000023228|P28331-3|NDUFS1;nc|ENSG00000023228|P28331-4|NDUFS1;nc|ENSG00000023228|P28331-5|NDUFS1 41.95555342248728 0.1369168616057562 3 {NN|[MP]|[D{I|L}]|[EV]}PVP[QP]{I|L}[{I|L}T] 10 2 + 35.594 0.0 0.0 3.2607 3.2607 70.087 0.0 0.0 0.0 1.706962271689747 5.764837301042718 1.706962271689747 1.706962271689747 0 1.0 1.2218487496163564 0.3252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}PVP[QP]{I|L}[{I|L}T];[DP]{I|L}VP[QP]{I|L}[{I|L}T];[{I|L}P]DVP[QP]{I|L}[{I|L}T];{NN|[MP]|[D{I|L}]|[EV]}P[QP][VP]{I|L}[{I|L}T];[VP]EVP[QP]{I|L}[{I|L}T];[DP]{I|L}[QP][VP]{I|L}[{I|L}T];[QP]P{I|L}D[VP]{I|L}[{I|L}T];[{I|L}P]D[QP][VP]{I|L}[{I|L}T];[{I|L}P][QP]D[VP]{I|L}[{I|L}T];[QP]P{I|L}T[QP]RR 3.2607;3.1043;2.8068;2.001;1.8656;1.8447;1.5742;1.5471;1.2492;1.1423 -;+;-;-;-;-;-;-;-;- + 267 1 1.565 60162.3 1.0 13901 5827 19729 HBL1_DMSO_200M_050219_1,19730 HBL1_DMSO_200M_050219_1,19730,DPLVPPQLTI False True DPLVPPQLTI 95.161379 546.818347156048 6516987.5 19729.0 ENSG00000023228|ENST00000233190|NDUFS1;;nc|ENSG00000023228|P28331-5|NDUFS1;;nc|ENSG00000023228|P28331-4|NDUFS1;;nc|ENSG00000023228|P28331-2|NDUFS1;;nc|ENSG00000023228|P28331-3|NDUFS1 5.039675235748291 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19731 95.164 140.0 384630.0 25 0 40129.0 + 44446 YMLEHVITL 9 89 559.7997288934064 0 559.7991210818291 PEAK CID FTMS 0 0 0 19729 230373.953125 0.4166128755890645 2 -0.2881393432617187 2 Unmodified _YMLEHVITL_ ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF 28.486842064014134 0.1241350795510704 3 {I|L}YMV{I|L}M 6 6 31.943 0.0 0.0 2.8582 0.0 0.0 232.1388121795877 132.0458162897094 364.1846284692971 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}YMV{I|L}M 2.8582 - 218 + 1 1.565 49266.8 1.0 13902 5827 19729 HBL1_DMSO_200M_050219_1,19731 HBL1_DMSO_200M_050219_1,19731,YMLEHVITL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19732 95.167 130.0 824740.0 25 0 83089.0 + 35784 SVIPVINKIDL 11 96 605.8736869386145 1209.7328209440288 2 605.8744994997978 MULTI CID FTMS 0 0 0 19729 496418.75 0.6534281387001529 -1 0.0741806030273437 3 Unmodified _SVIPVINKIDL_ ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF 51.487983226225225 0.1093896055713593 3 [VS]{I|L}PV{I|L}N[K{I|L}]D{I|L} 11 0 + 75.896 0.0 0.0 6.2738 6.2738 87.848 0.0 0.0 0.0 22.07934757848332 6.51841599052365 6.51841599052365 9.128498242811006 0 1.3494850021680094 1.6989700043360187 0.5994850021680094 0.4247425010840047 + + [VS]{I|L}PV{I|L}N[K{I|L}]D{I|L};[VS]{I|L}PV{I|L}GG[K{I|L}]D{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[{M(Oxidation (M))|F}V]{I|L}VP{I|L}[PA];{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}V{M(Oxidation (M))|F}VP{I|L}[PA];{[QN]|[E{I|L}]|[KN]}{I|L}[VP]{I|L}[{M(Oxidation (M))|F}V]{I|L}[PA];{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}VP[{M(Oxidation (M))|F}V]{I|L}[PA];{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}Q[WK]{I|L}[PA];{[QN]|[E{I|L}]|[KN]}{I|L}[VP]{I|L}{I|L}[{M(Oxidation (M))|F}V][PA];{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}VP{I|L}[{M(Oxidation (M))|F}V][PA];{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}[AG][WK]{I|L}[PA] 6.2738;5.5192;5.0381;4.9574;4.4991;4.4686;3.6256;3.237;3.2065;2.8681 +;-;-;-;-;-;-;-;-;- + 653 + 1 1.565 82491.0 1.0 13903 5827 19729 HBL1_DMSO_200M_050219_1,19732 HBL1_DMSO_200M_050219_1,19732,SVIPVINKIDL True True SVIPVINKIDL 95.166883 605.8755 12616514.0 19729.0 ENST00000506793.5_1_4:44680541-44700695:+|nuORF;;ENSG00000151806|ENST00000281543|GUF1 5.05528203646342 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19733 95.169 124.0 374850.0 25 0 67335.0 + 19411 LETCQAEGHIV 11 66 600.2878063527302 1198.5610597722605 2 600.2880737185478 MULTI CID FTMS 0 0 0 19729 419088.6875 1.0 0 0.0 4 Unmodified _LETCQAEGHIV_ REV__ENSG00000161542|ENST00000446526|PRPSAP1;REV__ENST00000472686.1_1_17:74309820-74324990:-|nuORF;REV__nc|ENSG00000161542|Q14558|PRPSAP1 18.1463463914782 0.6576820063886638 3 E{I|L}E{I|L}V 5 -1 29.961 0.0 0.0 2.4997 0.0 0.0 597.2299671857437 0.0 597.2299671857437 0.0 12.001962355242952 0.0 0.0 0 0.6989700043360187 0.0 0.4247425010840047 0.0 E{I|L}E{I|L}V 2.4997 - 78 1 1.565 42846.3 1.0 13904 5827 19729 HBL1_DMSO_200M_050219_1,19733 HBL1_DMSO_200M_050219_1,19733,LETCQAEGHIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19734 95.172 142.0 388840.0 25 0 66205.0 + 9237 FGTALNYVSL 10 78 542.7879061330025 1083.5612593328049 2 542.7874023318291 MULTI CID FTMS 0 0 0 19729 380191.90625 1.0 0 0.0 5 Unmodified _FGTALNYVSL_ ENSG00000160285|ENST00000397728|LSS;nc|ENSG00000160285|P48449-2|LSS;nc|ENSG00000160285|P48449-3|LSS 28.23362336080872 0.3343390635154222 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PN{I|L}N 7 8 46.943 0.0 0.0 4.3323 0.0 0.0 0.0 295.13208363799635 295.13208363799635 14.000838504205577 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PN{I|L}N 4.3323 - 545 1 1.565 50179.5 1.0 13905 5827 19729 HBL1_DMSO_200M_050219_1,19734 HBL1_DMSO_200M_050219_1,19734,FGTALNYVSL False True FGTALNYVSL 95.172319 542.787402331829 4081525.75 19729.0 nc|ENSG00000160285|P48449-2|LSS;;nc|ENSG00000160285|P48449-3|LSS;;ENSG00000160285|ENST00000397728|LSS -0.4349790643900633 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19735 95.175 117.0 402190.0 25 0 33598.0 + 45653 VYPMPRVIF 9 72 561.3133888964916 1120.612224859783 2 561.3134643435478 MULTI CID FTMS 0 0 0 19729 263078.71875 1.0 0 0.0 6 Unmodified _YVPSVFIPIS_ ENSG00000136937|ENST00000375147|NCBP1 14.838274106304384 0.5985701837916485 3 [YV]PM 4 7 40.005 0.0 0.0 3.5699 0.0 0.0 0.0 627.3638743700152 627.3638743700152 27.78659694992122 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [YV]PM 3.5699 - 31 + 1 1.565 41526.9 1.0 13906 5827 19729 HBL1_DMSO_200M_050219_1,19735 HBL1_DMSO_200M_050219_1,19735,YVPSVFIPIS False False VYPMPRVIF 95.174767 561.313464343548 4691389.5 19729.0 ENSG00000136937|ENST00000375147|NCBP1 5.6847991943359375 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19736 95.178 166.0 451430.0 25 0 48382.0 + + -1 SVFKDFYEL 9 99 574.2873608386795 1146.560168744159 2 574.2871581912041 MULTI CID FTMS 0 0 0 19729 255547.125 0.4050821299190124 -1 0.0741806030273437 7 Carbamidomethyl (C) _LFVFCFLVC(Carbamidomethyl (C))_ ENSG00000100994|ENST00000216962|PYGB 20.871210003555333 0.2717241269066626 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W{M(Oxidation (M))|F}YWSV 8 -1 + 36.847 0.0 0.0 3.2137 3.2137 74.746 0.0 0.0 0.0 6.989700043360188 6.977437731477423 6.977437731477423 4.771212547196626 0 0.0 0.0 0.7742275032520141 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W{M(Oxidation (M))|F}YWSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WY{M(Oxidation (M))|F}WSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W{M(Oxidation (M))|F}YD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[YE][RK]{M(Oxidation (M))|F}YE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}WE{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DYAVYE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WY{M(Oxidation (M))|F}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}YWE{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D[VS]{M(Oxidation (M))|F}YE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}YAVYE{I|L} 3.2137;2.7976;2.6052;2.595;2.4973;2.2335;2.1891;2.0812;1.9407;1.8864 -;-;-;-;-;-;-;-;-;- 450 + 1 1.565 61602.3 1.0 13907 5827 19729 HBL1_DMSO_200M_050219_1,19736 HBL1_DMSO_200M_050219_1,19736,LFVFCFLVC False False SVFKDFYEL 95.178029 574.287158191204 4976800.0 19729.0 ENSG00000100994|ENST00000216962|PYGB 4.22163454691569 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19737 95.192 800.0 334380.0 25 0 19971.0 + 27135 PFNWLFRWERQ 11 182 789.9046523371721 1577.7947517411442 2 789.9042846560478 MULTI CID FTMS 0 0 0 19729 233100.046875 1.0 0 0.0 8 Unmodified _PFNWLFRWERQ_ REV__ENSG00000215262|ENST00000399881|KCNU1 2.9952420565917617 0.861016188266951 3 {[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}{I|L}{I|L}S{I|L}DGTANK 15 -1 + 145.87 0.0 0.0 9.2455 9.2455 87.045 0.0 0.0 0.0 27.617608341954764 2.798859261804012 2.798859261804012 2.798859261804012 0 2.110924374808178 2.0 1.4049471895720984 1.6593793813122064 {[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}{I|L}{I|L}S{I|L}DGTANK;{[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}{I|L}{I|L}S{I|L}DGTAKN;{[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}{I|L}{I|L}S{I|L}DGTAGGK;{[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}{I|L}{I|L}S{I|L}D[QT]NK;{[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}{I|L}{I|L}S{I|L}D[QT]KN;{[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}{I|L}{I|L}S{I|L}D[TA]GNK;{[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}{I|L}{I|L}S{I|L}{[SA]|[TG]}DANK;{[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}{I|L}{I|L}SKVDDNK;{[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}{I|L}{I|L}S{I|L}D[TA]GKN;{[VA]|[{I|L}G]}DD{M(Oxidation (M))|F}{I|L}{I|L}S{I|L}{[SA]|[TG]}DAKN 9.2455;9.0681;8.6731;8.2838;8.1064;8.0478;8.0093;7.9438;7.8704;7.8319 -;-;-;-;-;-;-;-;-;- 17231 + 1 1.565 177981.2 0.8999999761581421 13908 5827 19729 HBL1_DMSO_200M_050219_1,19737 HBL1_DMSO_200M_050219_1,19737,PFNWLFRWERQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19738 95.206 800.0 191290.0 25 0 8451.7 -1 MLVYVYFPLTL 11 153 687.8701532545032 1373.7257535758065 2 687.8722411990166 MULTI CID FTMS 0 0 0 19729 185987.234375 0.4859682549169898 2 -0.2881393432617187 9 Oxidation (M) _M(Oxidation (M))LVYVYFPLTL_ ENST00000581310.5_1_18:51883493-51884258:-|nuORF 26.88365393820708 0.4609662362590818 3 {NN|[MP]|[D{I|L}]|[EV]}T{I|L}T[VG]{I|L}TD{I|L}T{I|L} 13 -1 + 72.245 0.0 0.0 5.259 5.259 76.166 0.0 0.0 0.0 5.7044577510695404 40.3553239739005 5.7044577510695404 1.7609125905568137 0 1.5924778212679485 0.8860566476931632 2.079689690656103 0.0 {NN|[MP]|[D{I|L}]|[EV]}T{I|L}T[VG]{I|L}TD{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}{I|L}[SG]{I|L}TD{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}T{[VA]|[{I|L}G]}VTD{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}{I|L}{[SA]|[TG]}VTD{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}{I|L}MN{I|L}D{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}TKE{I|L}D{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}T[VG]T{I|L}D{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}{I|L}[SG]T{I|L}D{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}T{[VA]|[{I|L}G]}S{I|L}D{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VT[RP]VTD{I|L}T{I|L} 5.259;5.1308;4.9819;4.8537;4.7179;4.6846;4.5891;4.4609;4.3119;4.2897 -;-;-;-;-;-;-;-;-;- 8102 1 1.565 113069.1 0.75 13909 5827 19729 HBL1_DMSO_200M_050219_1,19738 HBL1_DMSO_200M_050219_1,19738,MLVYVYFPLTL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19739 95.21 206.0 553960.0 25 0 58922.0 + 24245 MAPLALHLL 9 121 497.7916564438912 993.5687599545824 2 497.7915527224541 MULTI CID FTMS 0 0 0 19729 173800.859375 0.3522180871225015 -2 0.2517471313476562 10 Oxidation (M) _M(Oxidation (M))APLALHLL_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1 45.7499826716795 0.0496882803020414 3 {[MS]|[{M(Oxidation (M))|F}A]}P{I|L}A{I|L}H{I|L}{I|L} 9 0 + 52.814 0.0 0.0 5.3156 5.3156 76.382 0.0 0.0 0.0 20.63023042498984 8.116742845273066 8.116742845273066 1.7609125905568137 0 0.7742275032520141 2.0 0.0 0.0 + + {[MS]|[{M(Oxidation (M))|F}A]}P{I|L}A{I|L}H{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}A{I|L}{I|L}H{I|L} 5.3156;5.1384 +;- + 576 + 1 1.565 92335.1 1.0 13910 5827 19729 HBL1_DMSO_200M_050219_1,19739 HBL1_DMSO_200M_050219_1,19739,MAPLALHLL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19740 95.215 271.0 279860.0 25 0 22704.0 + 9065 FFACSGLMFII 11 98 624.8092390603057 1247.6039251874113 2 624.8096801638603 MULTI CID FTMS 0 0 0 19729 174371.375 0.4651587983448005 -4 0.4964370727539062 11 Unmodified _FFACSGLMFII_ REV__ENSG00000065665|ENST00000298428|SEC61A2;REV__ENST00000495368.1_1_10:12184516-12209761:+|nuORF;REV__nc|ENSG00000065665|Q9H9S3-2|SEC61A2;REV__nc|ENSG00000065665|Q9H9S3-3|SEC61A2 18.1463463914782 0.6576820063886638 3 PA{M(Oxidation (M))|F}K{I|L}{I|L}{I|L} 7 -1 34.073 0.0 0.0 2.731 0.0 0.0 447.0899830548844 0.0 447.0899830548844 0.0 8.386313713333635 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 PA{M(Oxidation (M))|F}K{I|L}{I|L}{I|L} 2.731 - 339 1 1.565 67163.3 1.0 13911 5827 19729 HBL1_DMSO_200M_050219_1,19740 HBL1_DMSO_200M_050219_1,19740,FFACSGLMFII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19741 95.224 555.0 143900.0 25 0 40859.0 -1 0 90 442.2680614437316 1765.0431399085264 4 442.5185424685478 MULTI CID FTMS 0 0 0 19729 167998.375 1.0 0 0.0 12 3 {I|L} 1 -1 11.109 0.0 0.0 0.6294 0.0 0.0 1633.9479688653607 0.0 1633.9479688653607 0.0 7.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.6294 - 23 + 1 1.565 78969.6 1.0 13912 5827 19729 HBL1_DMSO_200M_050219_1,19741 HBL1_DMSO_200M_050219_1,19741, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19742 95.231 271.0 200370.0 25 0 9423.0 + 32204 RVVDLITNLDM 11 95 644.8505580487911 1287.686563164382 2 644.8503906130791 MULTI CID FTMS 0 0 0 19729 142894.203125 1.0 0 0.0 13 Unmodified _RVVDLITNLDM_ ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 25.997395711884035 0.4817758527606796 3 [{I|L}T]A[PS]{I|L}{I|L}TN{I|L}DM 12 5 + 81.253 0.0 0.0 6.31 6.31 87.893 0.0 0.0 0.0 11.423329158756644 16.61181443446617 11.423329158756644 9.098233696509112 0 1.1382104921644451 2.0 0.6462566630072955 0.0 [{I|L}T]A[PS]{I|L}{I|L}TN{I|L}DM;[{I|L}T]A[PS]{I|L}{I|L}TGG{I|L}DM;{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]{I|L}{I|L}TN{I|L}DM;[{I|L}T]A[PS]{I|L}{I|L}G{[SA]|[TG]}{I|L}DM;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}TN{I|L}DM;{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]{I|L}{I|L}TGG{I|L}DM;[KA][RN]{I|L}{I|L}TN{I|L}DM;[{I|L}T]A[PS]{I|L}{I|L}TN{[ET]|[MV]}E;[{I|L}T]A[PS]{I|L}{I|L}T[WR]M;[VP]S[VS]{I|L}{I|L}TN{I|L}DM 6.31;5.6035;5.4229;4.9031;4.8652;4.714;4.5096;4.4279;4.3906;4.2947 -;-;-;-;-;-;-;-;-;- 459 1 1.565 45920.1 1.0 13913 5827 19729 HBL1_DMSO_200M_050219_1,19742 HBL1_DMSO_200M_050219_1,19742,RVVDLITNLDM False True RVVDLITNLDM 95.230562 644.850390613079 1640577.25 19729.0 ENSG00000086758|ENST00000262854|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 6.74584166208903 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19743 95.233 122.0 410550.0 25 0 45951.0 + 2896 AVFPDDMPTL 10 79 553.2649900757076 1104.515427218215 2 553.2663452029228 MULTI CID FTMS 0 0 0 19729 143401.921875 0.0576571611526211 -6 0.723846435546875 14 Unmodified _AVFPDDMPTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 48.345845343767074 0.089859443182303 3 PT{I|L} 3 7 29.877 0.0 0.0 2.705 0.0 0.0 775.3199143781745 0.0 775.3199143781745 0.0 6.94537812595911 0.0 0.0 0 0.4247425010840047 0.0 0.6421590589602533 0.0 + PT{I|L} 2.705 + + 103 + 1 1.565 47628.7 1.0 13914 5827 19729 HBL1_DMSO_200M_050219_1,19743 HBL1_DMSO_200M_050219_1,19743,AVFPDDMPTL True True AVFPDDMPTL 95.233087 553.266345202923 159161250.0 19729.0 nc|ENSG00000118058|Q03164-2|KMT2A;;nc|ENSG00000118058|Q03164|KMT2A;;ENSG00000118058|ENST00000534358|KMT2A 6.685957908630371 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19744 95.239 304.0 327940.0 25 0 61863.0 + 4932 DGLTVHLVI 9 114 483.7845946902921 965.5546364473844 2 483.7854186892509 MULTI CID FTMS 0 0 0 19729 139206.6875 0.0509426825376727 9 -0.979705810546875 15 Unmodified _DGLTVHLVI_ ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000175520|ENST00000311659|UBQLN3;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000472638.1_1_1:156020124-156021603:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;nc|ENSG00000160803|Q9NRR5-2|UBQLN4 42.09456458481378 0.0639583784996157 3 {[TV]|[{I|L}S]}H{I|L}[DG]{I|L}V{I|L} 9 6 + 28.328 0.0 0.0 2.9338 2.9338 72.117 0.0 0.0 0.0 4.461951911956209 3.5512742491621765 3.5512742491621765 3.0546218740408904 0 0.3182503180159344 1.0 0.8243923658886187 0.0 {[TV]|[{I|L}S]}H{I|L}[DG]{I|L}V{I|L};{[TV]|[{I|L}S]}H{I|L}V{[DA]|[EG]}V{I|L};{[TV]|[{I|L}S]}H{I|L}{I|L}[DG]V{I|L};[H{I|L}]S{I|L}[DG]{I|L}V{I|L};[H{I|L}]S{I|L}V{[DA]|[EG]}V{I|L};[HV]T{I|L}[DG]{I|L}V{I|L};[{I|L}P][NS][NP]{I|L}V{I|L};[H{I|L}]VT[DG]{I|L}V{I|L};[HV]T{I|L}V{[DA]|[EG]}V{I|L};[{I|L}P][QP]S{[NV]|[RG]}V{I|L} 2.9338;2.6175;2.1763;2.0582;1.7418;1.6771;1.564;1.4346;1.3607;1.3297 -;-;-;-;-;-;-;-;-;- 460 1 1.565 81042.6 1.0 13915 5827 19729 HBL1_DMSO_200M_050219_1,19744 HBL1_DMSO_200M_050219_1,19744,DGLTVHLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19745 95.252 800.0 188240.0 25 0 13958.0 -1 0 133 753.3822896590655 2257.1250395773964 3 753.3838378787041 MULTI CID FTMS 0 0 0 19729 135989.90625 0.705052427179747 2 -0.2881393432617187 16 3 [NP]N{I|L}{I|L}TTT{I|L}{I|L}N 11 -1 62.282 0.0 0.0 2.7593 0.0 0.0 0.0 1059.4644404950857 1059.4644404950857 32.47106736514975 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 1.0044321917401078 [NP]N{I|L}{I|L}TTT{I|L}{I|L}N 2.7593 - 4005 1 1.565 110995.4 0.7599999904632568 13916 5827 19729 HBL1_DMSO_200M_050219_1,19745 HBL1_DMSO_200M_050219_1,19745, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19746 95.266 800.0 208670.0 25 0 27940.0 + 33550 SILQSLVPA 9 157 464.2792162609106 926.5438795886212 2 464.2793762087822 MULTI CID FTMS 0 0 0 19729 128999.8046875 0.0246372596693751 9 -0.979705810546875 17 Unmodified _SILQSLVPA_ ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 32.30548876998284 0.1201446275138228 3 {[TV]|[{I|L}S]}Q 3 6 23.785 0.0 0.0 2.5671 0.0 0.0 0.0 595.3464057939525 595.3464057939525 5.715679134198638 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.0 {[TV]|[{I|L}S]}Q 2.5671 - 1292 1 1.565 131750.3 0.5400000214576721 13917 5827 19729 HBL1_DMSO_200M_050219_1,19746 HBL1_DMSO_200M_050219_1,19746,SILQSLVPA True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19747 95.281 800.0 141640.0 25 0 21430.0 -1 0 88 1162.195239245892 0 1162.195239245892 PEAK CID FTMS 0 0 0 -1 0 18 3 P 1 -1 2.2185 0.0 0.0 0.095527 0.0 0.0 1245.9181141345591 976.38532434635 2222.303438480909 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.095527 - 9 + 1 1.565 68723.9 0.7300000190734863 13918 5827 19729 HBL1_DMSO_200M_050219_1,19747 HBL1_DMSO_200M_050219_1,19747, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19748 95.295 800.0 205600.0 25 0 13172.0 43724 YDEKNLKIKPF 11 133 697.8888132108211 1393.7630734884422 2 697.8882934451103 MULTI CID FTMS 0 0 0 19729 84193.3984375 0.2133959338012032 -6 0.723846435546875 19 Unmodified _YDEKNLKIKPF_ ENSG00000146414|ENST00000275233|SHPRH;ENST00000433355.6_1_6:146231577-146267398:-|nuORF;nc|ENSG00000146414|Q149N8-2|SHPRH;nc|ENSG00000146414|Q149N8-4|SHPRH 16.149105407346934 0.6992268271266642 3 {[QN]|[E{I|L}]|[KN]}P{I|L}KPPV{I|L}EEM 12 10 + 93.234 0.0 0.0 6.6894 6.6894 87.835 0.0 0.0 0.0 16.22894348808127 16.611814434466183 16.22894348808127 7.271212547196626 0 1.7856668758921828 1.154901959985743 0.6307196863200843 0.0 {[QN]|[E{I|L}]|[KN]}P{I|L}KPPV{I|L}EEM;{[QN]|[E{I|L}]|[KN]}P{I|L}KPPVE{I|L}EM;{[QV]|[N{I|L}]|[RA]|[KV]}[KP]KPPV{I|L}EEM;[{I|L}P]R[{I|L}T]PPV{I|L}EEM;{[QV]|[N{I|L}]|[RA]|[KV]}[KP]KPPVE{I|L}EM;{[QN]|[E{I|L}]|[KN]}P{I|L}KPPV{I|L}T[C(Carbamidomethyl (C))Q];[{I|L}P]R[{I|L}T]PPVE{I|L}EM;[VP][KQ]KPPV{I|L}EEM;{[QV]|[N{I|L}]|[RA]|[KV]}[KP]K[RH]{I|L}EEM;{[VA]|[{I|L}G]}G[KP]KPPV{I|L}EEM 6.6894;6.1677;5.525;5.0676;5.0033;4.7346;4.5459;4.5055;4.3532;4.346 -;-;-;-;-;-;-;-;-;- 787 1 1.565 120851.4 0.5199999809265137 13919 5827 19729 HBL1_DMSO_200M_050219_1,19748 HBL1_DMSO_200M_050219_1,19748,YDEKNLKIKPF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19750 95.3 67.0 1008000.0 25 0 223790.0 + 13849 HVIDLDDATFL 11 77 629.8191891432107 1257.6238253532213 2 629.8194457888603 MULTI CID FTMS 0 0 0 19749 754911.75 0.5011310372708333 1 -0.1478424072265625 1 Unmodified _HVIDLDDATFL_ ENSG00000152219|ENST00000282032|ARL14EP 71.92227651296345 0.0268337859456942 3 [HV]{I|L}D{I|L}DDAT{M(Oxidation (M))|F}{I|L} 11 0 + 87.128 0.0 0.0 6.928 6.928 94.498 0.0 0.0 0.0 19.84183576065466 67.4355640415416 19.84183576065466 38.73835032203424 0 1.0682503180159344 1.3979400086720375 1.3494850021680094 0.0 + + [HV]{I|L}D{I|L}DDAT{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}[YT]{I|L}DWT{M(Oxidation (M))|F}{I|L};[HV]{I|L}D{I|L}D{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[C(Carbamidomethyl (C))K];[WK][HN]D{I|L}W{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}T][{I|L}A]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DAT{M(Oxidation (M))|F}{I|L};[WK][HN]D{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}{I|L};[WK][HN]D[TP]T{M(Oxidation (M))|F}{I|L};[WK][PG]C(Carbamidomethyl (C))[H{I|L}]T{M(Oxidation (M))|F}{I|L};[WK][HN]D{I|L}[{M(Oxidation (M))|F}V]S{I|L} 6.928;3.8477;3.0911;2.6336;2.3249;1.9015;1.7432;1.5039;0.89617 +;-;-;-;-;-;-;-;- + 437 1 1.579 57381.1 1.0 13920 5828 19749 HBL1_DMSO_200M_050219_1,19750 HBL1_DMSO_200M_050219_1,19750,HVIDLDDATFL True True HVIDLDDATFL 95.300405 629.81944578886 17321542.0 19749.0 ENSG00000152219|ENST00000282032|ARL14EP 7.41999610265096 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19751 95.302 83.0 713830.0 25 0 132550.0 + 37495 TLFSYYLL 8 92 510.2745625487382 1018.5345721642764 2 510.2744933962822 MULTI CID FTMS 0 0 0 19749 435421.34375 0.3740642007545564 3 -0.300872802734375 2 Unmodified _TLFSYYLL_ REV__ENST00000475582.5_1_2:27590224-27590551:-|nuORF 15.768221252438446 0.6779680726941459 3 [VP]VN{I|L} 5 -1 33.768 0.0 0.0 3.3153 0.0 0.0 0.0 493.1945202446077 493.1945202446077 9.49765088112862 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [VP]VN{I|L} 3.3153 - 227 1 1.579 48147.3 1.0 13921 5828 19749 HBL1_DMSO_200M_050219_1,19751 HBL1_DMSO_200M_050219_1,19751,TLFSYYLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19752 95.304 61.0 1043900.0 25 0 172930.0 + + 5589 LILEGNDIEL 10 89 564.8112442444148 1127.6079355556294 2 564.8112670779228 MULTI CID FTMS 0 0 0 19749 792759.6875 0.1300993736187623 -4 0.515716552734375 3 Unmodified _DNADLILIEL_ ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENST00000475906.1_1_14:35732014-35732239:+|nuORF;ENST00000511643.5_1_4:39456165-39456631:-|nuORF 23.80106514851385 0.4339316747945569 3 {I|L}{I|L}{I|L}E 4 -1 25.406 0.0 0.0 2.2531 0.0 0.0 0.0 656.2902530207263 656.2902530207263 3.399028321079953 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}{I|L}E 2.2531 + + 171 1 1.579 52609.7 1.0 13922 5828 19749 HBL1_DMSO_200M_050219_1,19752 HBL1_DMSO_200M_050219_1,19752,DNADLILIEL False False LILEGNDIEL 95.303785 564.811267077923 180538968.0 19749.0 ENSG00000163682|ENST00000295955|RPL9;;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;;ENST00000475906.1_1_14:35732014-35732239:+|nuORF;;ENST00000511643.5_1_4:39456165-39456631:-|nuORF 2.609706481297811 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19753 95.306 101.0 789810.0 25 0 57684.0 + 38999 TVRELFEEL 9 81 568.3033218795773 1134.5920908259543 2 568.3039428591728 MULTI CID FTMS 0 0 0 19749 510840.375 1.0 0 0.0 4 Unmodified _TVRELFEEL_ ENSG00000150990|ENST00000308736|DHX37 51.41523569358685 0.0372669606867193 3 {[TV]|[{I|L}S]}RE{I|L}{M(Oxidation (M))|F}EE{I|L} 9 0 + 84.702 0.0 0.0 7.4655 7.4655 94.655 0.0 0.0 0.0 17.727562184969372 68.27577916518273 17.727562184969372 17.47425010840047 0 1.1549471895720984 1.6989700043360187 0.3494850021680094 0.3494850021680094 + + {[TV]|[{I|L}S]}RE{I|L}{M(Oxidation (M))|F}EE{I|L};{[TV]|[{I|L}S]}[DV]A{I|L}{M(Oxidation (M))|F}EE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{I|L}{M(Oxidation (M))|F}EE{I|L};{[QN]|[E{I|L}]|[KN]}[TA]A{I|L}{M(Oxidation (M))|F}EE{I|L};{[TV]|[{I|L}S]}RE{I|L}EE{M(Oxidation (M))|F}{I|L};{[ET]|[MV]}[RV]{I|L}{M(Oxidation (M))|F}EE{I|L};{[ET]|[MV]}[{I|L}A]A{I|L}{M(Oxidation (M))|F}EE{I|L};{[TV]|[{I|L}S]}[DV]A{I|L}EE{M(Oxidation (M))|F}{I|L};[C(Carbamidomethyl (C))K]T{M(Oxidation (M))|F}{I|L}A[WP]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{I|L}EE{M(Oxidation (M))|F}{I|L} 7.4655;5.9253;5.3874;5.3093;4.9703;4.0698;3.917;3.4301;3.1811;2.8922 +;-;-;-;-;-;-;-;-;- + 373 1 1.579 64742.8 1.0 13923 5828 19749 HBL1_DMSO_200M_050219_1,19753 HBL1_DMSO_200M_050219_1,19753,TVRELFEEL True True TVRELFEEL 95.305966 568.303942859173 8907117.0 19749.0 ENSG00000150990|ENST00000308736|DHX37 6.352875232696533 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19754 95.308 118.0 929590.0 25 0 98289.0 + 4668 DAYVLPKLYV 10 98 590.8342767634228 1179.6540005936456 2 590.8345825076103 MULTI CID FTMS 0 0 0 19749 402816.8125 0.0070220353796098 14 -1.5407333374023438 5 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 45.69961567697781 0.105390671673896 3 {I|L}Q{I|L}VWYV 7 7 33.008 0.0 0.0 2.7981 0.0 0.0 260.1529978010564 0.0 260.1529978010564 0.0 0.3439541511755095 0.0 0.0 0 0.4291746928241126 0.0 0.0 0.0 {I|L}Q{I|L}VWYV 2.7981 - 589 1 1.579 88465.6 1.0 13924 5828 19749 HBL1_DMSO_200M_050219_1,19754 HBL1_DMSO_200M_050219_1,19754,DAYVLPKLYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19755 95.312 193.0 796450.0 25 0 102840.0 -1 0 138 946.4348000787228 1890.8550472242457 2 946.9395629763604 MULTI CID FTMS 0 0 0 19749 359099.40625 0.588701665593212 -1 0.1402969360351562 6 3 [{I|L}P]T{M(Oxidation (M))|F}AS 6 -1 11.737 0.0 0.0 0.62075 0.0 0.0 0.0 1271.50947442754 1271.50947442754 3.321036470754537 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.9143943297944483 0.0 [{I|L}P]T{M(Oxidation (M))|F}AS 0.62075 - 515 1 1.579 103220.0 1.0 13925 5828 19749 HBL1_DMSO_200M_050219_1,19755 HBL1_DMSO_200M_050219_1,19755, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19756 95.315 139.0 601100.0 25 0 83865.0 + 12575 GVIDLVFEKA 10 109 545.8106506705797 1089.6067484079592 2 545.8109619021416 MULTI CID FTMS 0 0 0 19749 329647.8125 1.0 0 0.0 7 Unmodified _GVIDLVFEKA_ ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3;nc|ENSG00000075151|O43432|EIF4G3 49.52724829834842 0.0829255630816734 3 [VG]{I|L}D{I|L}V{M(Oxidation (M))|F}E[KA] 10 0 + 81.986 0.0 0.0 7.5244 7.5244 82.924 0.0 0.0 0.0 17.566212630749817 1.710280959236954 1.710280959236954 1.710280959236954 0 1.6861818737241734 1.6989700043360187 0.4247425010840047 0.3252574989159953 + + [VG]{I|L}D{I|L}V{M(Oxidation (M))|F}E[KA];[VG]{I|L}D{I|L}V{M(Oxidation (M))|F}NT{I|L};[VG]{I|L}D{I|L}V{M(Oxidation (M))|F}GGT{I|L};[VG]{I|L}D{I|L}V{M(Oxidation (M))|F}[QT]V;[VG]{I|L}[WH][HK]T{I|L};[VG]{I|L}[WH]T[HK]{I|L};[VG]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[YR][KA];[VG]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[YR][KA] 7.5244;7.3674;6.5264;5.9939;3.8056;3.5657;2.8376;2.2119 +;-;-;-;-;-;-;- + 1032 + 1 1.579 70149.4 1.0 13926 5828 19749 HBL1_DMSO_200M_050219_1,19756 HBL1_DMSO_200M_050219_1,19756,GVIDLVFEKA True True GVIDLVFEKA 95.314976 545.810961902142 2347863.25 19749.0 nc|ENSG00000075151|O43432|EIF4G3;;nc|ENSG00000075151|O43432-3|EIF4G3;;ENSG00000075151|ENST00000602326|EIF4G3;;nc|ENSG00000075151|O43432-4|EIF4G3 8.458114782969156 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19757 95.321 353.0 65132.0 25 0 5937.0 43044 VYFLNVYRWKL 11 36 750.9193026139578 1499.8240522947156 2 751.4217407107353 MULTI CID FTMS 0 0 0 19749 322896.03125 1.0 0 0.0 8 Unmodified _VYFLNVYRWKL_ ENST00000359568.9_1_21:47865495-47865651:+|nuORF 0.3506318815782774 0.8734936314171269 3 AR 2 10 9.464 0.0 0.0 0.631 0.0 0.0 343.2478521477836 926.4256685846312 1269.6735207324148 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AR 0.631 - 18 + 1 1.579 24060.5 1.0 13927 5828 19749 HBL1_DMSO_200M_050219_1,19757 HBL1_DMSO_200M_050219_1,19757,VYFLNVYRWKL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19758 95.324 149.0 174720.0 25 0 35937.0 + + 20413 KQSSLYILI 9 54 532.8212884624608 1063.6280239917214 2 532.8220092654228 MULTI CID FTMS 0 0 0 19749 296607.0 1.0 0 0.0 9 Unmodified _LLHVEDLIL_ nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-2|TRO;nc|ENSG00000067445|Q12816-4|TRO;nc|ENSG00000067445|Q12816-5|TRO;ENST00000492706.5_1_X:54951111-54953173:+|nuORF;ENSG00000067445|ENST00000173898|TRO 18.13498045792455 0.3457906370836843 3 Y{I|L}{I|L}{I|L} 4 -1 23.386 0.0 0.0 2.1987 0.0 0.0 543.3022328107437 0.0 543.3022328107437 0.0 9.890690719683093 0.0 0.0 0 0.718765315847925 0.0 0.0 0.0 Y{I|L}{I|L}{I|L} 2.1987 - 23 1 1.579 29806.9 1.0 13928 5828 19749 HBL1_DMSO_200M_050219_1,19758 HBL1_DMSO_200M_050219_1,19758,LLHVEDLIL False False KQSSLYILI 95.324366 532.822009265423 1068744.875 19749.0 nc|ENSG00000067445|Q12816-3|TRO;;nc|ENSG00000067445|Q12816-2|TRO;;nc|ENSG00000067445|Q12816-4|TRO;;nc|ENSG00000067445|Q12816-5|TRO;;ENST00000492706.5_1_X:54951111-54953173:+|nuORF;;ENSG00000067445|ENST00000173898|TRO 1.5724368492762248 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19759 95.327 121.0 145220.0 25 0 8315.6 + -1 FYLQYCII 8 47 560.2820799330092 1118.5496069328185 2 560.2819702029228 MULTI CID FTMS 0 0 0 19749 265176.4375 1.0 0 0.0 10 Carbamidomethyl (C) _FYLQYC(Carbamidomethyl (C))II_ REV__ENST00000394885.7_1_15:77241588-77241771:+|nuORF 5.760428011301431 0.7893668129297577 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.62489 0.0 0.0 836.4118638681683 132.0457705133422 968.4576343815104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.62489 + + 5 + 1 1.579 20154.0 1.0 13929 5828 19749 HBL1_DMSO_200M_050219_1,19759 HBL1_DMSO_200M_050219_1,19759,FYLQYCII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19760 95.33 151.0 360770.0 25 0 66677.0 + 35804 SVITQVFHV 9 97 515.2889255607477 1028.5632981882952 2 515.2919799685478 MULTI CID FTMS 0 0 0 19749 219888.5 0.1223688146327143 4 -0.4346694946289062 11 Unmodified _SVITQVFHV_ ENSG00000115677|ENST00000310931|HDLBP;nc|ENSG00000115677|Q00341-2|HDLBP 25.399314129420983 0.2080152500878129 3 [VS]{I|L}TN{I|L}{M(Oxidation (M))|F}[HV] 9 2 + 53.433 0.0 0.0 5.1949 5.1949 74.006 0.0 0.0 0.0 31.153113369619305 7.147642715192504 7.147642715192504 0.5799194697768684 0 0.0 2.0 0.0 0.0 [VS]{I|L}TN{I|L}{M(Oxidation (M))|F}[HV];[VS]{I|L}TQV{M(Oxidation (M))|F}[HV];[VS]{I|L}TGG{I|L}{M(Oxidation (M))|F}[HV];[VS]{I|L}T[AG]V{M(Oxidation (M))|F}[HV];[VS]{I|L}TQ[WK][PA];[VS]E[KA]{I|L}{M(Oxidation (M))|F}[HV];[VS][WR]V{M(Oxidation (M))|F}[HV];[VS]{I|L}T[AG][WK][PA];{[QD]|[EN]|[WG]|[KD]|[RS]}{[SA]|[TG]}{I|L}NT{I|L}[PA];{[QD]|[EN]|[WG]|[KD]|[RS]}{[SA]|[TG]}VQT{I|L}[PA] 5.1949;5.1386;4.2997;4.2433;3.3156;3.2008;2.9784;2.4203;1.7532;1.6968 -;+;-;-;-;-;-;-;-;- + 520 + 1 1.579 46541.0 1.0 13930 5828 19749 HBL1_DMSO_200M_050219_1,19760 HBL1_DMSO_200M_050219_1,19760,SVITQVFHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19761 95.344 800.0 187510.0 25 0 16021.0 -1 0 113 1071.142335684198 3210.405177652794 3 1071.812548816204 MULTI CID FTMS 0 0 0 19749 198040.234375 1.0 0 0.0 12 3 {I|L}{M(Oxidation (M))|F}E{I|L} 4 -1 16.459 0.0 0.0 0.51267 0.0 0.0 2157.836712773175 547.2639864557249 2705.1006992289 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 {I|L}{M(Oxidation (M))|F}E{I|L} 0.51267 - 314 + 1 1.579 101954.8 0.9700000286102296 13931 5828 19749 HBL1_DMSO_200M_050219_1,19761 HBL1_DMSO_200M_050219_1,19761, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19762 95.353 511.0 253400.0 25 0 35595.0 + 32800 RLLEITEGSEFL 12 129 703.8811174051218 0 703.8818847537041 PEAK CID FTMS 0 0 0 19749 183871.3125 1.0 0 0.0 13 Unmodified _SEEVSRRRQFL_ ENSG00000165898|ENST00000556816|ISCA2;ENST00000555139.1_1_14:74960477-74961199:+|nuORF 16.149105407346934 0.3934762919021404 3 {M(Oxidation (M))|F}ESGET{I|L}E 8 9 59.105 0.0 0.0 4.2045 0.0 0.0 131.10245199423895 379.2472323053344 510.34968429957337 0.0 0.0 0.0 0.0 0 0.5 0.0 1.2614393726401687 0.0 {M(Oxidation (M))|F}ESGET{I|L}E 4.2045 - 425 + 1 1.579 97441.4 1.0 13932 5828 19749 HBL1_DMSO_200M_050219_1,19762 HBL1_DMSO_200M_050219_1,19762,SEEVSRRRQFL False False RLLEITEGSEFL 95.352776 703.881884753704 1445216.875 19749.0 ENSG00000165898|ENST00000556816|ISCA2;;ENST00000555139.1_1_14:74960477-74961199:+|nuORF 7.334648927052815 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19763 95.367 800.0 215120.0 25 0 14204.0 + 21313 LPERIRVMVEL 11 151 677.8949112121295 1353.775269491059 2 677.8947021365166 MULTI CID FTMS 0 0 0 19749 154952.53125 1.0 0 0.0 14 Unmodified _LPERIRVMVEL_ REV__ENSG00000132024|ENST00000318003|CC2D1A;REV__nc|ENSG00000132024|Q6P1N0-2|CC2D1A 55.50274090549119 0.0873970505193986 3 {I|L}{M(Oxidation (M))|F}VK{I|L}DVEQ 9 -1 124.83 0.0 0.0 9.2207 0.0 0.0 0.0 279.17195927158537 279.17195927158537 76.64848872191448 0.0 0.0 0.0 0 2.412437995416459 0.8239087409443188 1.555462187404089 2.584121882396211 {I|L}{M(Oxidation (M))|F}VK{I|L}DVEQ 9.2207 - 4351 + 1 1.579 129569.6 0.6800000071525574 13933 5828 19749 HBL1_DMSO_200M_050219_1,19763 HBL1_DMSO_200M_050219_1,19763,LPERIRVMVEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19764 95.371 241.0 247980.0 25 0 24550.0 + 865 AEVDVNQKLLL 11 105 621.3578322744459 1240.7011116156916 2 621.3588134646416 MULTI CID FTMS 0 0 0 19749 138145.234375 0.001217880903122 30 -3.4402084350585938 15 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 17.44264345198275 0.6723198055858692 3 {[DA]|[EG]}{I|L}DVA 6 -1 45.143 0.0 0.0 3.6385 0.0 0.0 0.0 653.3948731725853 653.3948731725853 20.728502661257973 0.0 0.0 0.0 0 1.5669015600442575 1.0969100130080565 0.2614393726401688 0.0 {[DA]|[EG]}{I|L}DVA 3.6385 - 801 1 1.579 49727.4 1.0 13934 5828 19749 HBL1_DMSO_200M_050219_1,19764 HBL1_DMSO_200M_050219_1,19764,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19765 95.386 800.0 249330.0 25 0 8793.4 -1 0 126 791.372936740873 2371.0969808228188 3 792.0426513552666 MULTI CID FTMS 0 0 0 19749 122366.109375 0.1594161452085331 -10 1.1885986328125 16 3 PPPPPP{[QN]|[E{I|L}]|[KN]} 8 -1 40.667 0.0 0.0 1.7151 0.0 0.0 1528.6659441364443 0.0 1528.6659441364443 0.0 4.247921404123609 0.0 0.0 0 0.0 0.0 0.2134679910804404 1.948104871308642 PPPPPP{[QN]|[E{I|L}]|[KN]} 1.7151 - 13976 + 1 1.579 140881.5 0.4699999988079071 13935 5828 19749 HBL1_DMSO_200M_050219_1,19765 HBL1_DMSO_200M_050219_1,19765, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19766 95.4 800.0 90120.0 25 0 2250.3 -1 0 88 1159.898974597454 0 1159.898974597454 PEAK CID FTMS 0 0 0 -1 0 17 3 S 1 -1 5.4846 0.0 0.0 0.23663 0.0 0.0 1072.0958485095582 1155.6096795937915 2227.70552810335 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.23663 - 9 + 1 1.579 49517.9 0.4000000059604645 13936 5828 19749 HBL1_DMSO_200M_050219_1,19766 HBL1_DMSO_200M_050219_1,19766, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19767 95.414 800.0 84172.0 25 0 2800.6 -1 0 81 1154.7234141924043 0 1154.394580066204 PEAK CID FTMS 0 0 0 19749 38010.87109375 1.0 0 0.0 18 3 V 1 -1 3.9794 0.0 0.0 0.17246 0.0 0.0 1636.085609047115 569.2711275690061 2205.356736616121 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.17246 - 9 + 1 1.579 48393.4 0.3899999856948852 13937 5828 19749 HBL1_DMSO_200M_050219_1,19767 HBL1_DMSO_200M_050219_1,19767, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19768 95.429 800.0 117820.0 25 0 9915.7 + 34504 SMVDTFYAI 9 116 1046.4880557001327 1045.4807792335328 1 1046.009448230267 MULTI CID FTMS 0 0 0 19749 46440.33984375 0.6100864085699172 1 -0.1478424072265625 19 Unmodified _SMVDTFYAI_ ENSG00000188921|ENST00000495827|HACD4 34.10243960390752 0.1078313939113124 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}GT{M(Oxidation (M))|F}Y[{I|L}A] 9 3 + 51.524 0.0 0.0 4.9283 4.9283 86.212 0.0 0.0 0.0 14.436974992327116 4.762036441594191 4.762036441594191 14.436974992327116 0 0.25 1.3979400086720375 1.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}GT{M(Oxidation (M))|F}Y[{I|L}A];[VS]MDT{M(Oxidation (M))|F}Y[{I|L}A];{NN|[MP]|[D{I|L}]|[EV]}S{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}Y[{I|L}A];[VS]E{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}Y[{I|L}A];{[TV]|[{I|L}S]}[EC]T{M(Oxidation (M))|F}Y[{I|L}A];{[TV]|[{I|L}S]}D{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}Y[{I|L}A];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}GY[{M(Oxidation (M))|F}T][{I|L}A];[VS]{M(Oxidation (M))|F}M{[ES]|[DT]|[{I|L}C]}Y[{I|L}A];[QP]GED[PG]Y[{I|L}A];[{M(Oxidation (M))|F}T]DY[PG]Y[{I|L}A] 4.9283;3.5474;3.2287;2.8043;2.4225;2.2284;2.0342;1.2798;1.2244;1.1797 -;-;-;-;-;-;-;-;-;- 1102 1 1.579 63821.9 0.4099999964237213 13938 5828 19749 HBL1_DMSO_200M_050219_1,19768 HBL1_DMSO_200M_050219_1,19768,SMVDTFYAI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19769 95.443 800.0 149170.0 25 0 6195.0 -1 0 106 1185.830126941204 0 1185.830126941204 PEAK CID FTMS 0 0 0 -1 0 20 3 PPPPP 5 -1 23.443 0.0 0.0 0.98932 0.0 0.0 1527.2159656970582 354.14170252017817 1881.3576682172363 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPPP 0.98932 - 98 + 1 1.579 70846.0 0.7900000214576721 13939 5828 19749 HBL1_DMSO_200M_050219_1,19769 HBL1_DMSO_200M_050219_1,19769, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19771 95.448 12.0 2022900.0 25 0 237740.0 + 4919 DGLLRVLTV 9 55 493.3051711892997 984.5957894453994 2 493.3058044314384 MULTI CID FTMS 0 0 0 19770 5732794.5 1.0 0 0.0 1 Unmodified _DGLLRVLTV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 28.49450938151212 0.1686335738423394 3 [DG]{I|L}{I|L}RV{I|L}{[TV]|[{I|L}S]} 9 0 + 38.574 0.0 0.0 3.9177 3.9177 84.883 0.0 0.0 0.0 12.14764271519251 23.9697716852544 12.14764271519251 38.57386545501627 0 1.242992819099939 1.0 0.0 0.0 + + [DG]{I|L}{I|L}RV{I|L}{[TV]|[{I|L}S]} 3.9177 + + 26 1 1.569 27879.0 1.0 13940 5829 19770 HBL1_DMSO_200M_050219_1,19771 HBL1_DMSO_200M_050219_1,19771,DGLLRVLTV False True DGLLRVLTV 95.447542 493.305804431438 149495352.0 19770.0 chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;;nc|ENSG00000165025|P43405-2|SYK;;ENSG00000165025|ENST00000375754|SYK 6.091889381408691 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19772 95.449 15.0 4529200.0 25 0 495470.0 + 30770 RIAELLTEL 9 87 529.3185237922218 1056.6224946512434 2 529.3177978396416 MULTI CID FTMS 0 0 0 19770 2399443.25 1.0 0 0.0 2 Unmodified _RIAELLTEL_ ENSG00000176476|ENST00000317058|SGF29;ENST00000564682.5_1_16:28592390-28596314:+|nuORF;ENST00000569581.1_1_16:28592390-28600520:+|nuORF 34.93206674587334 0.1032771302489716 3 {[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}TE{I|L} 9 2 + 54.983 0.0 0.0 5.2037 5.2037 88.365 0.0 0.0 0.0 1.6183184368875914 38.78530614985209 1.6183184368875914 25.03205960551831 0 1.110924374808178 0.0 0.5 0.0 {[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}TE{I|L};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[VP]{M(Oxidation (M))|F}{I|L};[VP][WK][KG]TE{I|L} 5.2037;2.8346;2.6926 -;-;- 195 1 1.569 61697.8 1.0 13941 5829 19770 HBL1_DMSO_200M_050219_1,19772 HBL1_DMSO_200M_050219_1,19772,RIAELLTEL True True RIAELLTEL 95.448721 529.317797839642 29103038.0 19770.0 ENSG00000176476|ENST00000317058|SGF29;;ENST00000564682.5_1_16:28592390-28596314:+|nuORF;;ENST00000569581.1_1_16:28592390-28600520:+|nuORF 3.150862177213033 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19773 95.45 16.0 3748500.0 25 0 465120.0 + 18292 KVLDFEHFL 9 84 574.3108540834507 1146.6071552337014 2 574.3109008669853 MULTI CID FTMS 0 0 0 19770 3090092.25 0.4222227148765937 -2 0.2881393432617187 3 Unmodified _KVLDFEHFL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 71.70789743142352 0.0204387454931768 3 KV{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L} 9 0 + 89.784 0.0 0.0 7.8304 7.8304 97.503 0.0 0.0 0.0 39.94132235100295 11.082268588648247 11.082268588648247 89.78437246573776 0 2.1989700043360187 1.0969100130080565 0.805462187404089 0.0 + + KV{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L} 7.8304 + + 476 + 1 1.569 47727.4 1.0 13942 5829 19770 HBL1_DMSO_200M_050219_1,19773 HBL1_DMSO_200M_050219_1,19773,KVLDFEHFL True True KVLDFEHFL 95.449898 574.310900866985 73009830.0 19770.0 ENST00000548725.5_1_12:56552185-56553955:+|nuORF;;ENSG00000092841|ENST00000550697|MYL6;;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;;nc|ENSG00000092841|P60660-2|MYL6 8.992817242940268 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19774 95.451 32.0 1254600.0 25 0 114310.0 + 10258 FQVGDGIGMDL 11 77 576.2728358179324 1150.5311187026648 2 576.2739745974541 MULTI CID FTMS 0 0 0 19770 1385030.75 0.9896459254109352 -2 0.2881393432617187 4 Unmodified _FQVGDGIGMDL_ ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF;ENST00000584992.1_1_18:21044583-21047491:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3 20.41453444215458 0.6105011870913812 3 {NN|[MP]|[D{I|L}]|[EV]}N 3 9 20.164 0.0 0.0 1.7526 0.0 0.0 0.0 805.3534508161991 805.3534508161991 3.965912507003608 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}N 1.7526 - 169 1 1.569 36457.0 1.0 13943 5829 19770 HBL1_DMSO_200M_050219_1,19774 HBL1_DMSO_200M_050219_1,19774,FQVGDGIGMDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19775 95.452 43.0 1103600.0 25 0 95833.0 + 10149 FPWSEIRNI 9 69 581.3042992557498 1160.5940455782995 2 581.3053466677666 MULTI CID FTMS 0 0 0 19770 1127209.75 0.6876899784709813 -2 0.2881393432617187 5 Unmodified _FPWSEIRNI_ ENSG00000092820|ENST00000367075|EZR;ENSG00000137710|ENST00000645495|RDX;ENSG00000147065|ENST00000360270|MSN;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX 20.41453444215458 0.284085796332423 3 P[KG]{I|L}ESWPE 9 8 45.099 0.0 0.0 3.8858 0.0 0.0 119.07400710273592 0.0 119.07400710273592 0.0 11.911225100727592 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 P[KG]{I|L}ESWPE 3.8858 - 194 1 1.569 43935.9 1.0 13944 5829 19770 HBL1_DMSO_200M_050219_1,19775 HBL1_DMSO_200M_050219_1,19775,FPWSEIRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19776 95.454 49.0 1163800.0 25 0 105520.0 27124 PFLWGPRV 8 77 486.276888480758 970.539224028316 2 486.2770873904228 MULTI CID FTMS 0 0 0 19770 651013.1875 0.2627421562864429 -7 0.905792236328125 6 Unmodified _PFLWGPRV_ nc|ENSG00000166473|Q7Z442-6|PKD1L2 22.4526382665184 0.5719518724627818 3 WP{M(Oxidation (M))|F}{I|L} 4 6 48.003 0.0 0.0 4.946 0.0 0.0 0.0 424.2322260214177 424.2322260214177 26.85673429115696 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.0 0.0 WP{M(Oxidation (M))|F}{I|L} 4.946 - 111 + 1 1.569 50555.4 1.0 13945 5829 19770 HBL1_DMSO_200M_050219_1,19776 HBL1_DMSO_200M_050219_1,19776,PFLWGPRV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 19777 95.455 80.0 921340.0 25 0 136250.0 27190 PGGPAGQA 8 85 327.6632871394395 653.312021345679 2 327.6631042361259 MULTI CID FTMS 0 0 0 19770 688753.3125 0.9235616455576856 -2 0.2881393432617187 7 Unmodified _PGGPAGQA_ ENST00000288774.7_1_1:2336406-2336715:-|nuORF 0.0 0.8243325171867699 3 {I|L} 1 8 9.732 0.0 0.0 1.4896 0.0 0.0 410.1055984714587 127.09942041568594 537.2050188871447 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.4896 - 5 + 1 1.569 64269.4 1.0 13946 5829 19770 HBL1_DMSO_200M_050219_1,19777 HBL1_DMSO_200M_050219_1,19777,PGGPAGQA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19778 95.458 102.0 795070.0 25 0 73437.0 + 33485 SIIEYLPTLR 10 75 602.8508182088378 1203.6870834844756 2 602.8514282107353 MULTI CID FTMS 0 0 0 19770 573451.1875 1.0 0 0.0 8 Unmodified _SIIEYLPTLR_ ENSG00000176208|ENST00000321990|ATAD5 37.07464296494664 0.1884581770199685 3 {[TV]|[{I|L}S]}{I|L}EY{I|L} 6 4 65.406 0.0 0.0 5.4338 0.0 0.0 0.0 482.27416206674206 482.27416206674206 39.71971276399756 0.0 0.0 0.0 0 1.274227503252014 2.0 0.4247425010840047 0.0 + {[TV]|[{I|L}S]}{I|L}EY{I|L} 5.4338 + + 128 + 1 1.569 64170.8 1.0 13947 5829 19770 HBL1_DMSO_200M_050219_1,19778 HBL1_DMSO_200M_050219_1,19778,SIIEYLPTLR False True SIIEYLPTLR 95.457596 602.851428210735 12362777.0 19770.0 ENSG00000176208|ENST00000321990|ATAD5 9.987441698710125 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19779 95.459 68.0 734160.0 25 0 66421.0 + 34077 SIVNHLEFL 9 94 535.7982164087542 1069.5818798843084 2 536.2960693240166 MULTI CID FTMS 0 0 0 19770 581893.25 0.2238632360192777 11 -1.175689697265625 9 Unmodified _SLLFSFPFL_ ENSG00000086758|ENST00000262854|HUWE1;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 19.438996006549623 0.310492472477042 3 [HN]V{I|L}E{M(Oxidation (M))|F}RR 8 8 + 17.924 0.0 0.0 1.6758 1.6758 70.915 0.0 0.0 0.0 1.03749437538362 1.804782212094338 1.03749437538362 3.309932190414246 0 0.0 0.0 0.0 0.0 [HN]V{I|L}E{M(Oxidation (M))|F}RR;[H{I|L}]NVE{M(Oxidation (M))|F}RR;[HN]{I|L}VE{M(Oxidation (M))|F}RR;[H{I|L}]NEV{M(Oxidation (M))|F}RR;[H{I|L}]ENV{M(Oxidation (M))|F}RR;[HN]V{I|L}S{I|L}[{I|L}T]{[CA]|SS};{[QN]|[E{I|L}]|[KN]}HNV{M(Oxidation (M))|F}RR;[HN]{I|L}EV{M(Oxidation (M))|F}RR;[H{I|L}]NVS{I|L}[{I|L}T]{[CA]|SS};[H{I|L}]GGVE{M(Oxidation (M))|F}RR 1.6758;1.3664;1.0223;0.9943;0.92027;0.9119;0.71285;0.65026;0.60244;0.50039 -;-;-;-;-;-;-;-;-;- 315 1 1.569 44504.3 1.0 13948 5829 19770 HBL1_DMSO_200M_050219_1,19779 HBL1_DMSO_200M_050219_1,19779,SLLFSFPFL False False SIVNHLEFL 95.459236 536.296069324017 3850217.75 19770.0 ENSG00000086758|ENST00000262854|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 2.5475518504778543 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19780 95.461 103.0 504330.0 25 0 66851.0 + 8243 EQDLLTSTDTL 11 72 618.3038637065497 1234.5931744798993 2 618.3041259646416 MULTI CID FTMS 0 0 0 19770 505515.0 0.0459010823344733 4 -0.3965225219726562 10 Unmodified _EQDLLTSTDTL_ REV__ENSG00000137145|ENST00000434457|DENND4C;REV__ENST00000602708.1_1_9:19230809-19276502:+|nuORF;REV__nc|ENSG00000137145|Q5VZ89-3|DENND4C;REV__nc|ENSG00000137145|Q5VZ89-5|DENND4C;REV__nc|ENSG00000137145|Q5VZ89|DENND4C 13.614867670302877 0.751941774060705 3 [{I|L}A]GED{I|L}A{I|L} 8 -1 56.944 0.0 0.0 4.6124 0.0 0.0 0.0 449.1508276383556 449.1508276383556 45.03261100997573 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.0994850021680094 0.0 [{I|L}A]GED{I|L}A{I|L} 4.6124 - 539 1 1.569 44177.2 1.0 13949 5829 19770 HBL1_DMSO_200M_050219_1,19780 HBL1_DMSO_200M_050219_1,19780,EQDLLTSTDTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19781 95.464 149.0 513310.0 25 0 49398.0 + 11773 GLLAVLRPL 9 74 476.3211159216749 950.6276789101496 2 476.3211547732353 MULTI CID FTMS 0 0 0 19770 432411.90625 0.2125706104028794 2 -0.1530303955078125 11 Unmodified _GLLAVLRPL_ ENSG00000168569|ENST00000307366|TMEM223 50.855029805455786 0.0384952370514206 3 {[VA]|[{I|L}G]}{I|L}AV{I|L}[RP]{I|L} 9 0 + 68.394 0.0 0.0 7.1947 7.1947 84.273 0.0 0.0 0.0 48.72872192056825 6.483259264971153 6.483259264971153 3.0102999566398125 0 1.3494850021680094 2.0 0.0 0.3807196863200844 + + {[VA]|[{I|L}G]}{I|L}AV{I|L}[RP]{I|L};{[VA]|[{I|L}G]}{I|L}A{I|L}V[RP]{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}G{I|L}[RP]{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}AV[RP]{I|L} 7.1947;6.878;6.4312;6.1145 +;-;-;- + 348 + 1 1.569 63725.1 1.0 13950 5829 19770 HBL1_DMSO_200M_050219_1,19781 HBL1_DMSO_200M_050219_1,19781,GLLAVLRPL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19782 95.466 93.0 519640.0 25 0 58590.0 + 1203 AIDPHLLLSV 10 93 539.317708364079 1076.6208637949578 2 539.8177978396416 MULTI CID FTMS 0 0 0 19770 420250.4375 0.0921655599866132 4 -0.3965225219726562 12 Unmodified _AIDPHLLLSV_ ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A 20.453626601364224 0.5043500229302764 3 [{I|L}A]GHD{I|L}{I|L}V 8 4 50.355 0.0 0.0 4.6771 0.0 0.0 0.0 255.1349378518516 255.1349378518516 33.76078152608656 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]GHD{I|L}{I|L}V 4.6771 - 235 1 1.569 44328.8 1.0 13951 5829 19770 HBL1_DMSO_200M_050219_1,19782 HBL1_DMSO_200M_050219_1,19782,AIDPHLLLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19783 95.47 165.0 526850.0 25 0 52848.0 + 35785 SVIPVINKIDL 11 87 605.8736869386145 1209.7328209440288 2 605.8743163943291 MULTI CID FTMS 0 0 0 19770 369040.90625 0.4857627002911456 1 -0.0522537231445312 13 Unmodified _SVIPVINKIDL_ ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF 42.312485326615175 0.1767732348921932 3 [VP]{I|L}NK{I|L}D 7 4 36.419 0.0 0.0 3.0105 0.0 0.0 0.0 427.25375005721577 427.25375005721577 -7.429155219028942 0.0 -7.429155219028942 0.0 0 0.0 1.5228787452803376 0.0 0.0 + [VP]{I|L}NK{I|L}D 3.0105 + + 389 1 1.569 65924.8 1.0 13952 5829 19770 HBL1_DMSO_200M_050219_1,19783 HBL1_DMSO_200M_050219_1,19783,SVIPVINKIDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19784 95.473 178.0 595170.0 25 0 76574.0 + 9740 FMFDEKLVTV 10 102 614.817959720799 1227.6213665083978 2 614.8185912966728 MULTI CID FTMS 0 0 0 19770 364832.6875 0.1592873088248745 -2 0.2881393432617187 14 Unmodified _FMFDEKLVTV_ ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C 49.52724829834842 0.0829255630816734 3 {[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}M{M(Oxidation (M))|F}VTV 11 7 + 53.348 0.0 0.0 4.3456 4.3456 70.207 0.0 0.0 0.0 4.715019720568435 1.4228158574365324 1.4228158574365324 0.0134875797167453 0 0.5994850021680094 1.154901959985743 1.4436726795685342 0.0 {[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}M{M(Oxidation (M))|F}VTV;{[TV]|[{I|L}S]}GD{M(Oxidation (M))|F}{I|L}M{M(Oxidation (M))|F}VTV;{[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}VM{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}GD{M(Oxidation (M))|F}{I|L}VM{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}VTV{[YD]|[{M(Oxidation (M))|F}M]};{[TV]|[{I|L}S]}GD{M(Oxidation (M))|F}{I|L}VTV{[YD]|[{M(Oxidation (M))|F}M]};{[TV]|[{I|L}S]}GD{I|L}{M(Oxidation (M))|F}M{M(Oxidation (M))|F}VTV;{[TV]|[{I|L}S]}GD{I|L}{M(Oxidation (M))|F}VM{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}GD{I|L}{M(Oxidation (M))|F}VTV{[YD]|[{M(Oxidation (M))|F}M]};{[{M(Oxidation (M))|F}D]|MM}EK{I|L}M{M(Oxidation (M))|F}VTV 4.3456;4.3445;4.3062;4.3051;4.2297;4.2286;4.2058;4.1663;4.0899;3.9616 -;-;-;-;-;-;-;-;-;- 2290 1 1.569 83095.6 1.0 13953 5829 19770 HBL1_DMSO_200M_050219_1,19784 HBL1_DMSO_200M_050219_1,19784,FMFDEKLVTV True True FMFDEKLVTV 95.473192 614.818591296673 37547160.0 19770.0 ENSG00000119414|ENST00000373547|PPP6C;;nc|ENSG00000119414|O00743-2|PPP6C;;nc|ENSG00000119414|O00743-3|PPP6C 5.358222961425781 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19785 95.476 112.0 465440.0 25 0 51725.0 -1 MKRDAVFSL 9 87 541.7856422212229 1081.5567315092458 2 541.7855712771416 MULTI CID FTMS 0 0 0 19770 339627.03125 0.6363929943317562 -2 0.2881393432617187 15 Oxidation (M) _M(Oxidation (M))KRDAVFSL_ ENST00000478515.1_1_3:4856585-4856630:+|nuORF 12.531546534597751 0.4974689918368763 3 P{I|L}KG{I|L} 5 -1 13.109 0.0 0.0 1.2121 0.0 0.0 555.2078269312591 0.0 555.2078269312591 0.0 2.831526044362377 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}KG{I|L} 1.2121 - 66 + 1 1.569 47331.4 1.0 13954 5829 19770 HBL1_DMSO_200M_050219_1,19785 HBL1_DMSO_200M_050219_1,19785,MKRDAVFSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19786 95.48 210.0 394310.0 25 0 56742.0 + 28089 PPILVPAL 8 83 410.27058238375855 818.5266118343171 2 410.2705871462822 MULTI CID FTMS 0 0 0 19770 336961.65625 0.8949244605773451 1 -0.0522537231445312 16 Unmodified _PPILVPAL_ ENST00000478260.5_1_11:3109453-3111165:-|nuORF 52.33426049586781 0.1282678332820461 3 [{I|L}P]PV{I|L} 5 4 36.427 0.0 0.0 4.4503 0.0 0.0 0.0 296.16086254719374 296.16086254719374 11.785437214322345 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [{I|L}P]PV{I|L} 4.4503 - 186 1 1.569 70647.4 1.0 13955 5829 19770 HBL1_DMSO_200M_050219_1,19786 HBL1_DMSO_200M_050219_1,19786,PPILVPAL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19787 95.483 163.0 1083900.0 25 0 184600.0 + 18293 KVLDFEHFL 9 114 383.2094904872831 1146.606642062049 3 383.2093994021416 MULTI CID FTMS 0 0 0 19770 321695.375 0.2146451373453379 -2 0.2881393432617187 17 Unmodified _KVLDFEHFL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 71.70789743142352 0.0204387454931768 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{M(Oxidation (M))|F}EH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 0 + 66.359 0.0 0.0 5.7874 5.7874 89.845 0.0 0.0 0.0 11.846207887177885 30.98509658967147 11.846207887177885 19.288526799332764 0 1.5044321917401078 0.0 1.1237125054200234 0.819341519366547 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{M(Oxidation (M))|F}EH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}VK{M(Oxidation (M))|F}EH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[{M(Oxidation (M))|F}H]|[RQ]}E{I|L}E{[NV]|[RG]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[{M(Oxidation (M))|F}H]|[RQ]}E{I|L}[WR]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}[WR]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 5.7874;4.1052;3.3811;3.3412;2.6718 +;-;-;-;- + 337 1 1.569 141498.1 1.0 13956 5829 19770 HBL1_DMSO_200M_050219_1,19787 HBL1_DMSO_200M_050219_1,19787,KVLDFEHFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19788 95.485 112.0 622540.0 25 0 61453.0 -1 FKKGEKMKVL 10 81 612.3612518503202 1222.7079507674405 2 612.3609496951103 MULTI CID FTMS 0 0 0 19770 278921.84375 0.0547232091128098 4 -0.3965225219726562 18 Oxidation (M) _FKKGEKM(Oxidation (M))KVL_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 20.41453444215458 0.5050059513928961 3 {M(Oxidation (M))|F}KV{I|L} 4 -1 39.993 0.0 0.0 3.2708 0.0 0.0 717.3840496405045 0.0 717.3840496405045 0.0 26.80523450795789 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {M(Oxidation (M))|F}KV{I|L} 3.2708 + + 310 1 1.569 57233.3 1.0 13957 5829 19770 HBL1_DMSO_200M_050219_1,19788 HBL1_DMSO_200M_050219_1,19788,FKKGEKMKVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19789 95.491 337.0 235880.0 25 0 14399.0 -1 0 106 858.9153315262155 1715.8161101192309 2 858.9162475466728 MULTI CID FTMS 0 0 0 19770 272429.0625 1.0 0 0.0 19 3 [YE]{M(Oxidation (M))|F} 3 -1 20.458 0.0 0.0 1.1923 0.0 0.0 0.0 1273.6190330530778 1273.6190330530778 3.0225622685225773 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [YE]{M(Oxidation (M))|F} 1.1923 - 94 1 1.569 56640.2 1.0 13958 5829 19770 HBL1_DMSO_200M_050219_1,19789 HBL1_DMSO_200M_050219_1,19789, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19790 95.495 208.0 455530.0 25 0 81685.0 + 12854 GVVIHLPGL 9 87 452.78398717330725 903.5534214134144 2 452.7840148806572 MULTI CID FTMS 0 0 0 19770 266063.3125 0.669826659082559 1 -0.0522537231445312 20 Unmodified _GVVIHLPGL_ ENSG00000035687|ENST00000366535|ADSS2;ENSG00000185100|ENST00000330877|ADSS1;ENST00000557582.5_1_14:105204639-105207027:+|nuORF;ENST00000588022.1_1_17:33786947-33787550:-|nuORF;nc|ENSG00000185100|Q8N142-2|ADSS1 79.93452657146344 0.0175326119056068 3 [VG]V{I|L}H{I|L}PG{I|L} 9 0 + 63.488 0.0 0.0 7.0265 7.0265 89.784 0.0 0.0 0.0 19.72025325470113 8.893017025063095 8.893017025063095 8.893017025063095 0 1.6989700043360187 2.0 0.0 0.0 + + [VG]V{I|L}H{I|L}PG{I|L};[VG]V{I|L}H{I|L}PAV 7.0265;6.0423 +;- + 253 + 1 1.569 76387.5 1.0 13959 5829 19770 HBL1_DMSO_200M_050219_1,19790 HBL1_DMSO_200M_050219_1,19790,GVVIHLPGL True True GVVIHLPGL 95.495158 452.784014880657 8732156.0 19770.0 ENSG00000035687|ENST00000366535|ADSS2;;ENST00000588022.1_1_17:33786947-33787550:-|nuORF;;ENST00000557582.5_1_14:105204639-105207027:+|nuORF;;nc|ENSG00000185100|Q8N142-2|ADSS1;;ENSG00000185100|ENST00000330877|ADSS1 6.087727705637614 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19792 95.5 71.0 553260.0 25 0 58896.0 + 2897 AVFPDDMPTL 10 73 553.2649900757076 1104.515427218215 2 553.2656738162041 MULTI CID FTMS 0 0 0 19791 472240.375 0.1898722070676519 -3 0.34039306640625 1 Unmodified _AVFPDDMPTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 20.453626601364224 0.5043500229302764 3 [TP]{I|L} 3 7 21.427 0.0 0.0 1.9399 0.0 0.0 0.0 790.3071807184682 790.3071807184682 1.215190243431472 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + [TP]{I|L} 1.9399 + + 64 1 1.569 39239.4 1.0 13960 5830 19791 HBL1_DMSO_200M_050219_1,19792 HBL1_DMSO_200M_050219_1,19792,AVFPDDMPTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19793 95.504 247.0 553860.0 25 0 70262.0 + 24246 MAPLALHLL 9 120 497.7916564438912 993.5687599545824 2 497.7916137576103 MULTI CID FTMS 0 0 0 19791 313536.28125 0.6354004785851056 1 -0.1007766723632812 2 Oxidation (M) _M(Oxidation (M))APLALHLL_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1 67.41302359171755 0.0220989861905124 3 {[MS]|[{M(Oxidation (M))|F}A]}P{I|L}A{I|L}H{I|L}{I|L} 9 0 + 59.681 0.0 0.0 6.0067 6.0067 77.08 0.0 0.0 0.0 22.725672864477943 11.61159286695316 11.61159286695316 0.7918124604762511 0 1.0629529932484498 2.0 0.0 0.0 + + {[MS]|[{M(Oxidation (M))|F}A]}P{I|L}A{I|L}H{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}A{I|L}{I|L}H{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}PA{I|L}H{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}PA{I|L}{I|L}H{I|L} 6.0067;5.927;5.4131;5.3334 +;-;-;- + 462 + 1 1.569 109957.3 1.0 13961 5830 19791 HBL1_DMSO_200M_050219_1,19793 HBL1_DMSO_200M_050219_1,19793,MAPLALHLL True False MAPLALHLL 95.504392 497.79161375761 11746089.0 19791.0 ENSG00000104951|ENST00000391826|IL4I1;;chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1 5.40732463200887 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19794 95.507 130.0 826150.0 25 0 84232.0 + 30785 RIFGESIMIGV 11 88 611.3369592674288 1220.6593656016576 2 611.3368408083916 MULTI CID FTMS 0 0 0 19791 360287.21875 0.2891214254761685 -1 0.0522537231445312 3 Unmodified _RIFGESIMIGV_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35;nc|ENSG00000163002|Q8NFH5-3|NUP35 37.07464296494664 0.257459615863268 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[{M(Oxidation (M))|F}V]AA{I|L}M{I|L}GV 12 5 + 59.069 0.0 0.0 4.8391 4.8391 82.415 0.0 0.0 0.0 4.867574738500338 37.8976719887757 4.867574738500338 8.416375079047498 0 0.8494850021680094 1.5228787452803376 0.805462187404089 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[{M(Oxidation (M))|F}V]AA{I|L}M{I|L}GV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{M(Oxidation (M))|F}]AA{I|L}M{I|L}R;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{M(Oxidation (M))|F}][RV]M{I|L}GV;{[VA]|[{I|L}G]}M[{M(Oxidation (M))|F}V]AA{I|L}M{I|L}GV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[{M(Oxidation (M))|F}V][RV]M{I|L}R;[TA][KS]{[QS]|[NT]}S{I|L}M{I|L}R;{[VA]|[{I|L}G]}M[{M(Oxidation (M))|F}V][RV]M{I|L}R 4.8391;4.1496;4.0879;3.4109;3.4107;2.4058;2.3305 -;-;-;-;-;-;- 446 1 1.569 84936.8 1.0 13962 5830 19791 HBL1_DMSO_200M_050219_1,19794 HBL1_DMSO_200M_050219_1,19794,RIFGESIMIGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19795 95.519 684.0 713990.0 25 0 68212.0 + -1 FQVGDGIGMDL 11 134 1151.53955237915 0 1151.539965808392 PEAK CID FTMS 0 0 0 19791 321547.9375 1.0 0 0.0 4 ENST00000584992.1_1_18:21044583-21047491:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3;ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF 3 VEMG{M(Oxidation (M))|F}QVDG 9 -1 53.278 0.0 0.0 2.3154 0.0 0.0 1168.5385739983842 167.08327661685783 1335.621850615242 0.0 0.0 0.0 0.0 0 0.0 0.0 1.635151878060192 1.4916440611282624 VEMG{M(Oxidation (M))|F}QVDG 2.3154 - 20774 + 1 1.569 286776.0 1.0 13963 5830 19791 HBL1_DMSO_200M_050219_1,19795 HBL1_DMSO_200M_050219_1,19795, False False FQVGDGIGMDL 95.518979 1151.53996580839 1660754.25 19791.0 ENST00000584992.1_1_18:21044583-21047491:+|nuORF;;nc|ENSG00000101782|O14730-2|RIOK3;;ENSG00000101782|ENST00000339486|RIOK3;;ENST00000581302.5_1_18:21033283-21057068:+|nuORF 9.04843044281006 1.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19796 95.522 173.0 880270.0 25 0 107980.0 + 42872 VVLSAVVIIT 10 138 507.33505760606886 1012.6555622789376 2 507.3364440798759 MULTI CID FTMS 0 0 0 19791 325160.53125 0.3246782622761715 -1 0.0522537231445312 5 Unmodified _VVLSAVVIIT_ ENSG00000163399|ENST00000295598|ATP1A1;ENST00000463382.1_1_1:116929939-116930896:+|nuORF;nc|ENSG00000163399|P05023-2|ATP1A1;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1 74.92900055777586 0.0187778523875693 3 VV{[SA]|[TG]}{I|L}{I|L}T{I|L}VV 10 6 + 56.123 0.0 0.0 5.5422 5.5422 75.037 0.0 0.0 0.0 3.845661362546693 0.4982858413988253 0.4982858413988253 0.4982858413988253 0 0.4604093769761875 2.0 1.7416440611282624 0.0 VV{[SA]|[TG]}{I|L}{I|L}T{I|L}VV;VV{[SA]|[TG]}{I|L}VV{I|L}[{I|L}T];VV{[SA]|[TG]}{I|L}{I|L}VV[{I|L}T];VV{I|L}D[K{I|L}]{I|L}T{I|L};VV{[SA]|[TG]}{I|L}{I|L}TV[{I|L}V];VV{[SA]|[TG]}{I|L}T{I|L}{I|L}VV;VV{I|L}[RV]T{I|L}T{I|L};VV{[SA]|[TG]}{I|L}T{I|L}V[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}T{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}VV{I|L}[{I|L}T] 5.5422;5.493;5.4269;5.1624;5.1353;5.1145;4.8916;4.7076;4.6812;4.632 -;-;-;-;-;-;-;-;-;- 3424 1 1.569 117631.8 1.0 13964 5830 19791 HBL1_DMSO_200M_050219_1,19796 HBL1_DMSO_200M_050219_1,19796,VVLSAVVIIT True True VVLDKLITI 95.522346 507.336444079876 4323294.5 19791.0 ENST00000560334.5_1_15:79271198-79356973:-|nuORF;;ENSG00000058335|ENST00000558480|RASGRF1;;nc|ENSG00000058335|Q13972|RASGRF1 3.3493049144744877 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19797 95.527 262.0 522760.0 25 0 24669.0 + 2782 ATSFLTGLL 9 116 922.5242896865064 921.5170132199064 1 922.5256225466728 MULTI CID FTMS 0 0 0 19791 307031.90625 0.353780073492477 2 -0.2345733642578125 6 Unmodified _ATSFLTGLL_ REV__ENSG00000054392|ENST00000261458|HHAT;REV__nc|ENSG00000054392|Q5VTY9-2|HHAT;REV__nc|ENSG00000054392|Q5VTY9-3|HHAT;REV__nc|ENSG00000054392|Q5VTY9-5|HHAT;REV__nc|ENSG00000054392|Q5VTY9-6|HHAT;REV__nc|ENSG00000054392|Q5VTY9-7|HHAT 57.47134341890925 0.0274820932774257 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TSATAV{I|L} 9 -1 + 47.462 0.0 0.0 5.1504 5.1504 75.767 0.0 0.0 0.0 1.7609125905568137 10.946987849218786 1.7609125905568137 1.7609125905568137 0 0.5 0.0 2.0356668758921828 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TSATAV{I|L};[{M(Oxidation (M))|F}T]{I|L}SATAV{I|L};[{M(Oxidation (M))|F}T]S{I|L}ATAV{I|L};[{M(Oxidation (M))|F}T]SA{I|L}TAV{I|L};[{M(Oxidation (M))|F}T]SA[TA]{I|L}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TSATG{I|L}{I|L};[{M(Oxidation (M))|F}T]{I|L}SATG{I|L}{I|L};[{M(Oxidation (M))|F}T]S{I|L}ATG{I|L}{I|L};[{M(Oxidation (M))|F}T]SA{I|L}TG{I|L}{I|L};[R{M(Oxidation (M))|F}]VASMV{I|L} 5.1504;4.9593;4.8208;4.6526;3.8726;3.8111;3.6201;3.4815;3.3134;3.2266 -;-;-;-;-;-;-;-;-;- 2333 1 1.569 90797.2 1.0 13965 5830 19791 HBL1_DMSO_200M_050219_1,19797 HBL1_DMSO_200M_050219_1,19797,ATSFLTGLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19798 95.533 296.0 589200.0 25 0 71601.0 + 12774 GVPQALFGV 9 114 887.498606394404 886.4913299278039 1 887.4988891482353 MULTI CID FTMS 0 0 0 19791 302267.59375 0.0126973805284894 18 -2.0470962524414062 7 Unmodified _GVPQALFGV_ ENSG00000010292|ENST00000315579|NCAPD2 54.773552608820026 0.0299037012502309 3 [QP]A{I|L}GV{M(Oxidation (M))|F}GV 9 4 + 74.765 0.0 0.0 8.4338 8.4338 89.369 0.0 0.0 0.0 26.271818570135324 53.28849377292904 26.271818570135324 4.783723055721168 0 0.3807196863200844 1.2218487496163564 0.0 1.1906140654642814 [QP]A{I|L}GV{M(Oxidation (M))|F}GV;[QP]A{I|L}{M(Oxidation (M))|F}GVGV;[QP]A{I|L}G{M(Oxidation (M))|F}VGV;[QP]AGV{I|L}{M(Oxidation (M))|F}GV;[QP]AG{I|L}V{M(Oxidation (M))|F}GV;[QP]QV{I|L}{M(Oxidation (M))|F}GV;[QP]A{I|L}{M(Oxidation (M))|F}GGVV;[QP]GVA{I|L}{M(Oxidation (M))|F}GV;[QP]Q{I|L}V{M(Oxidation (M))|F}GV;[QP]AG{I|L}{M(Oxidation (M))|F}VGV 8.4338;7.8941;7.6647;7.6583;7.4453;6.9276;6.8862;6.7324;6.7145;6.6762 -;-;-;-;-;-;-;-;-;- 1703 1 1.569 117042.8 1.0 13966 5830 19791 HBL1_DMSO_200M_050219_1,19798 HBL1_DMSO_200M_050219_1,19798,GVPQALFGV True True GVPQALFGV 95.532681 887.498889148235 0.0 19791.0 ENSG00000010292|ENST00000315579|NCAPD2 6.334598223368327 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19799 95.537 240.0 394580.0 25 0 65455.0 + 11726 GLIEIISNA 9 114 465.2691374466749 928.5237219601496 2 465.2693054080009 MULTI CID FTMS 0 0 0 19791 280098.34375 0.4308241733627652 -1 0.0522537231445312 8 Unmodified _GLIEIISNA_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000480835.1_1_2:96943505-96944085:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 74.42276476219924 0.019389277360085 3 {[QN]|[E{I|L}]|[KN]}{I|L}G{I|L} 5 6 43.684 0.0 0.0 4.7047 0.0 0.0 0.0 400.1810271447762 400.1810271447762 6.747425010840047 0.0 0.0 0.0 0 0.2614393726401688 1.0 0.8851518780601924 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}G{I|L} 4.7047 - 430 1 1.569 77922.7 1.0 13967 5830 19791 HBL1_DMSO_200M_050219_1,19799 HBL1_DMSO_200M_050219_1,19799,GLIEIISNA True True GLIEIISNA 95.537161 465.269305408001 10705870.0 19791.0 ENST00000480835.1_1_2:96943505-96944085:-|nuORF;;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 5.221536000569661 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19800 95.541 203.0 563920.0 25 0 41734.0 + 43875 YFPDYSIGNL 10 124 594.7810217359291 1187.5474905386582 2 594.7825805544853 MULTI CID FTMS 0 0 0 19791 259937.15625 0.5769792067323116 3 -0.344268798828125 9 Unmodified _YFPDYSIGNL_ ENSG00000164815|ENST00000297431|ORC5;ENST00000463152.5_1_7:103824789-103838202:-|nuORF;ENST00000485726.1_1_7:103828364-103848439:-|nuORF;nc|ENSG00000164815|O43913-2|ORC5 34.10243960390752 0.2198439752719791 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GE{I|L}WRGN{I|L} 10 6 + 31.679 0.0 0.0 2.6676 2.6676 66.713 0.0 0.0 0.0 0.3137217576573547 1.5597632468097018 0.3137217576573547 0.3137217576573547 0 0.1989700043360188 1.3010299956639813 0.0 0.5866968715561641 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GE{I|L}WRGN{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}S{I|L}[NG]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];[DP]YS{I|L}[NG]{M(Oxidation (M))|F}[Y{I|L}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GE{I|L}WRGQV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{[QS]|[NT]}{M(Oxidation (M))|F}P[{M(Oxidation (M))|F}E];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}D{I|L}[NG]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[RH][YQ]GN{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{[QS]|[NT]}P{M(Oxidation (M))|F}[Y{I|L}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GE{I|L}WRGGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GEK{[QG]|[NA]}AAGN{I|L} 2.6676;2.6412;2.5363;2.067;2.0399;1.882;1.8299;1.7085;1.4018;1.3378 -;-;-;-;-;-;-;-;-;- 702 + 1 1.569 89997.3 1.0 13968 5830 19791 HBL1_DMSO_200M_050219_1,19800 HBL1_DMSO_200M_050219_1,19800,YFPDYSIGNL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19801 95.546 290.0 536220.0 25 0 85668.0 + 22505 LPVSPSLLPV 10 166 511.3183602065914 1020.6221674799827 2 511.3182556033134 MULTI CID FTMS 0 0 0 19791 230220.328125 0.5885276245400037 1 -0.1007766723632812 10 Unmodified _LPVSPSLLPV_ ENST00000476040.6_1_1:110210707-110212286:+|nuORF 64.23631603340823 0.0254735623525308 3 [{I|L}T]{I|L}{I|L}S{M(Oxidation (M))|F}KS{I|L} 9 8 + 78.198 0.0 0.0 7.6618 7.6618 83.948 0.0 0.0 0.0 16.91002913357245 2.04119982655925 2.04119982655925 2.04119982655925 0 0.7742275032520141 2.0 1.885151878060192 0.0 [{I|L}T]{I|L}{I|L}S{M(Oxidation (M))|F}KS{I|L};[{I|L}T]{I|L}{I|L}S{M(Oxidation (M))|F}KTV;[{I|L}T]{I|L}{I|L}SK{I|L}S{M(Oxidation (M))|F};[VP]{I|L}SPS{I|L}{I|L}PV;[VP]VTPS{I|L}{I|L}PV;[{I|L}P]VSPS{I|L}{I|L}PV;{[TV]|[{I|L}S]}[VP]PS{I|L}{I|L}PV;[{I|L}T]{I|L}{I|L}SP[{I|L}P][PA];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}KT{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}KT{I|L}VT{I|L} 7.6618;7.4618;6.1351;6.0049;5.07;5.0154;4.2248;4.0332;2.8922;2.8116 -;-;-;-;-;+;-;-;-;- + 1919 + 1 1.569 117707.1 1.0 13969 5830 19791 HBL1_DMSO_200M_050219_1,19801 HBL1_DMSO_200M_050219_1,19801,LPVSPSLLPV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19802 95.555 388.0 658160.0 25 0 102680.0 + 13695 HQIPEFDNLYL 11 129 694.8458437851517 1387.677134637103 2 694.8463012576103 MULTI CID FTMS 0 0 0 19791 205075.015625 0.1969112712310326 -1 0.0522537231445312 11 Unmodified _HQIPEFDNLYL_ ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2-3|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1 80.6760300276096 0.0071538679453211 3 [EP]{M(Oxidation (M))|F}DN{I|L}HQ{I|L}Y{I|L} 11 6 + 94.154 0.0 0.0 6.785 6.785 81.59 0.0 0.0 0.0 1.989700043360188 16.575773191777927 1.989700043360188 1.989700043360188 0 0.8252574989159953 0.6989700043360187 1.6624379954164592 1.5356668758921828 [EP]{M(Oxidation (M))|F}DN{I|L}HQ{I|L}Y{I|L};[DN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}HQ{I|L}Y{I|L};[DN]{M(Oxidation (M))|F}[EP]{I|L}HQ{I|L}Y{I|L};[EP]{M(Oxidation (M))|F}DN{I|L}H[AG]{I|L}Y{I|L};[HQ]{I|L}[EP]{M(Oxidation (M))|F}DN{I|L}Y{I|L};[DN]{I|L}[YV]{M(Oxidation (M))|F}DN{I|L}Y{I|L};[DN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GG{I|L}HQ{I|L}Y{I|L};[DN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}H[AG]{I|L}Y{I|L};[Y{I|L}]N[DV]{M(Oxidation (M))|F}DN{I|L}Y{I|L};[DN]{M(Oxidation (M))|F}[EP]{I|L}H[AG]{I|L}Y{I|L} 6.785;6.6416;6.4319;6.1272;6.1131;6.011;5.9838;5.9838;5.9679;5.7741 -;-;-;-;+;-;-;-;-;- + 3883 1 1.569 186048.9 1.0 13970 5830 19791 HBL1_DMSO_200M_050219_1,19802 HBL1_DMSO_200M_050219_1,19802,HQIPEFDNLYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19803 95.557 115.0 774230.0 25 0 59311.0 + 18379 LPPDVWMKI 9 94 550.3003780171566 1098.5862031011131 2 549.8051635622978 MULTI CID FTMS 0 0 0 19791 183228.140625 0.1064444190364207 -3 0.34039306640625 12 Unmodified _KVPNQYTHL_ nc|ENSG00000170791|Q9BUK0-3|CHCHD7;nc|ENSG00000170791|Q9BUK0-5|CHCHD7 10.799506525563784 0.5443532743200366 3 PPDVWMK{I|L} 8 7 36.474 0.0 0.0 3.3201 0.0 0.0 114.07488137909702 0.0 114.07488137909702 0.0 2.371002345360558 0.0 0.0 0 0.2887254899964357 0.0 0.3054621874040891 0.0 PPDVWMK{I|L} 3.3201 - 888 + 1 1.569 78091.7 1.0 13971 5830 19791 HBL1_DMSO_200M_050219_1,19803 HBL1_DMSO_200M_050219_1,19803,KVPNQYTHL False False LPPDVWMKI 95.556923 549.805163562298 64731276.0 19791.0 nc|ENSG00000170791|Q9BUK0-3|CHCHD7;;nc|ENSG00000170791|Q9BUK0-5|CHCHD7 5.393502155939738 2.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 19804 95.564 393.0 352860.0 25 0 21791.0 -1 0 112 739.1056322050283 2952.393422953713 4 739.3599731326103 MULTI CID FTMS 0 0 0 19791 177433.25 0.3945194255442785 -1 0.0522537231445312 13 3 [H{I|L}]VEA{I|L}Y{I|L}AAN 11 -1 63.18 0.0 0.0 2.1399 0.0 0.0 0.0 1754.7304340223257 1754.7304340223257 42.74668561522834 0.0 0.0 0.0 0 1.5 1.3979400086720375 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}AAN 2.1399 - 1548 1 1.569 105745.1 1.0 13972 5830 19791 HBL1_DMSO_200M_050219_1,19804 HBL1_DMSO_200M_050219_1,19804, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19805 95.568 212.0 678410.0 25 0 86645.0 + 37556 TLIDLPGITRV 11 102 599.3637472949681 1196.712941656736 2 599.3641845583916 MULTI CID FTMS 0 0 0 19791 157137.328125 0.0798023485188398 -2 0.2000961303710937 14 Unmodified _TLIDLPGITRV_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 53.31671820480216 0.0992620867501809 3 [{I|L}T]{I|L}D{I|L}V{[QS]|[NT]}{I|L}E 10 5 70.297 0.0 0.0 5.8742 0.0 0.0 0.0 82.06698023013905 82.06698023013905 50.23509716672216 0.0 0.0 0.0 0 0.5 2.0 0.8169015600442578 0.7742275032520141 [{I|L}T]{I|L}D{I|L}V{[QS]|[NT]}{I|L}E 5.8742 - 1452 + 1 1.569 112393.9 1.0 13973 5830 19791 HBL1_DMSO_200M_050219_1,19805 HBL1_DMSO_200M_050219_1,19805,TLIDLPGITRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19806 95.573 244.0 338510.0 25 0 22239.0 + -1 LIGCCFYFLI 10 119 624.8092390603057 1247.6039251874113 2 625.3110839724541 MULTI CID FTMS 0 0 0 19791 157112.171875 0.5761129323964278 -3 0.34039306640625 15 Carbamidomethyl (C) _LIGC(Carbamidomethyl (C))CFYFLI_ REV__ENST00000606080.1_1_6:116381649-116381904:-|nuORF 32.116972079565 0.2470863257317063 3 [EP]VG{[QN]|[E{I|L}]|[KN]}[EC]{M(Oxidation (M))|F}{I|L}{I|L} 11 -1 + 44.683 0.0 0.0 3.5815 3.5815 80.832 0.0 0.0 0.0 4.495982478268559 14.839936629444068 4.495982478268559 9.317496819840647 0 0.3807196863200844 0.958607314841775 0.3054621874040891 0.6307196863200843 [EP]VG{[QN]|[E{I|L}]|[KN]}[EC]{M(Oxidation (M))|F}{I|L}{I|L};[EP]V{I|L}{[DA]|[EG]}[EC]{M(Oxidation (M))|F}{I|L}{I|L};{I|L}{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[C(Carbamidomethyl (C))S]M{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}PG{[QN]|[E{I|L}]|[KN]}[EC]{M(Oxidation (M))|F}{I|L}{I|L};[EP]VG{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}T]M{I|L}{I|L};[EP]VG{[QN]|[E{I|L}]|[KN]}[EC]{I|L}{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}P{I|L}{[DA]|[EG]}[EC]{M(Oxidation (M))|F}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[YC]|[HE]}EHP{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]DG{[QN]|[E{I|L}]|[KN]}[EC]{M(Oxidation (M))|F}{I|L}{I|L};[EP]V{I|L}{[DA]|[EG]}[{M(Oxidation (M))|F}T]M{I|L}{I|L} 3.5815;2.8347;2.8142;2.7327;2.5934;2.5489;2.4914;2.2666;2.1616;2.1073 -;-;-;-;-;-;-;-;-;- 729 1 1.569 70495.2 1.0 13974 5830 19791 HBL1_DMSO_200M_050219_1,19806 HBL1_DMSO_200M_050219_1,19806,LIGCCFYFLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19807 95.576 181.0 143420.0 25 0 10272.0 + 25370 NAYFLLPKV 9 57 532.8100743753553 1063.6055958175104 2 532.8086425662041 MULTI CID FTMS 0 0 0 19791 201008.875 0.3289153309503024 -1 0.0522537231445312 16 Unmodified _NAYFLLPKV_ ENSG00000121210|ENST00000409959|TMEM131L;ENST00000462540.1_1_4:154475378-154479541:+|nuORF;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L 19.256988751693697 0.3154191944385105 3 {[QG]|[NA]}Y 3 6 28.429 0.0 0.0 2.6729 0.0 0.0 0.0 712.4384259779198 712.4384259779198 15.24104976468614 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[QG]|[NA]}Y 2.6729 + + 36 1 1.569 25480.6 1.0 13975 5830 19791 HBL1_DMSO_200M_050219_1,19807 HBL1_DMSO_200M_050219_1,19807,NAYFLLPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19808 95.582 332.0 219930.0 25 0 17590.0 24823 MPKKFVQML 9 101 561.3133888964916 1120.612224859783 2 561.3124267458916 MULTI CID FTMS 0 0 0 19791 131850.921875 0.5011842938170004 3 -0.344268798828125 17 Unmodified _MPKKFVQML_ ENSG00000271271|ENST00000604629|UGT2A2;nc|ENSG00000271271|P0DTE5-2|UGT2A2 13.50788311687929 0.4710407108020397 3 [YV]PM 4 7 39.693 0.0 0.0 3.5421 0.0 0.0 0.0 627.3635007291737 627.3635007291737 27.21848749616356 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [YV]PM 3.5421 - 113 + 1 1.569 61986.7 1.0 13976 5830 19791 HBL1_DMSO_200M_050219_1,19808 HBL1_DMSO_200M_050219_1,19808,MPKKFVQML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19809 95.591 463.0 478000.0 25 0 61365.0 + 12697 GVLPQLSMV 9 165 472.2677026678453 942.5208524024904 2 472.2680236697197 MULTI CID FTMS 0 0 0 19791 111183.828125 0.2680200266838643 -1 0.0522537231445312 18 Unmodified _GVLPQLSMV_ ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF 37.97399986684836 0.0865783450051559 3 [QP]{I|L}S{I|L}R 6 5 42.144 0.0 0.0 4.4714 0.0 0.0 0.0 245.09449677188425 245.09449677188425 20.488712451106693 0.0 0.0 0.0 0 0.3807196863200844 0.958607314841775 0.7887254899964358 0.2614393726401688 [QP]{I|L}S{I|L}R 4.4714 - 1431 1 1.569 168942.7 1.0 13977 5830 19791 HBL1_DMSO_200M_050219_1,19809 HBL1_DMSO_200M_050219_1,19809,GVLPQLSMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19810 95.596 253.0 633670.0 25 0 42903.0 -1 0 117 771.3662180162245 3081.4357661984977 4 771.6175414919853 MULTI CID FTMS 0 0 0 19791 109023.015625 0.0832016292056961 -3 0.34039306640625 19 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 69.562 0.0 0.0 2.2574 0.0 0.0 0.0 2040.822586318424 2040.822586318424 43.61432819416656 0.0 0.0 0.0 0 1.274227503252014 1.5228787452803376 0.3252574989159953 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.2574 - 603 1 1.569 115791.9 1.0 13978 5830 19791 HBL1_DMSO_200M_050219_1,19810 HBL1_DMSO_200M_050219_1,19810, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19812 95.601 12.0 5385600.0 25 0 862910.0 + 5590 DNADLILIEL 10 75 564.8112442444148 1127.6079355556294 2 564.8115722537041 MULTI CID FTMS 0 0 0 19811 5677538.0 0.9317377625823348 -1 0.1007766723632812 1 Unmodified _DNADLILIEL_ REV__ENSG00000075275|ENST00000674500|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6-2|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6|CELSR1 32.89776655970281 0.2325650513667944 3 {[QN]|[E{I|L}]|[KN]}G[DN]{I|L}{I|L} 7 -1 40.249 0.0 0.0 3.5694 0.0 0.0 0.0 370.1972004416551 370.1972004416551 8.566730218049507 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.6643943297944485 1.0629529932484498 {[QN]|[E{I|L}]|[KN]}G[DN]{I|L}{I|L} 3.5694 - 86 1 1.57 52601.1 1.0 13979 5831 19811 HBL1_DMSO_200M_050219_1,19812 HBL1_DMSO_200M_050219_1,19812,DNADLILIEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19813 95.603 90.0 1300200.0 25 0 169440.0 -1 0 117 946.4348000787228 1890.8550472242457 2 946.4342529177666 MULTI CID FTMS 0 0 0 19811 555575.8125 0.8473424597050129 2 -0.2434921264648437 2 3 [{I|L}P]T{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}RQ 9 -1 19.482 0.0 0.0 1.0303 0.0 0.0 0.0 814.2286793866082 814.2286793866082 9.103554506848084 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5994850021680094 0.0 [{I|L}P]T{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}RQ 1.0303 - 1077 1 1.57 79988.2 1.0 13980 5831 19811 HBL1_DMSO_200M_050219_1,19813 HBL1_DMSO_200M_050219_1,19813, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19814 95.604 17.0 3562400.0 25 0 469520.0 + 24644 MLQEPLLVV 9 74 529.2996534907433 1056.5847540482864 2 529.3004028201103 MULTI CID FTMS 0 0 0 19811 1379964.125 1.0 0 0.0 3 Oxidation (M) _M(Oxidation (M))LQEPLLVV_ ENSG00000163902|ENST00000296255|RPN1 58.6788170122104 0.0268135626297836 3 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}PQ{I|L}{I|L}VV 9 4 + 43.015 0.0 0.0 4.0712 4.0712 75.726 0.0 0.0 0.0 3.066972380763673 -3.0076660462230365 -3.0076660462230365 3.851518780601914 0 0.805462187404089 0.0 1.4604093769761874 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}PQ{I|L}{I|L}VV;{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}Q{I|L}{I|L}VV;[EP]YPQ{I|L}{I|L}VV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P[AG]{I|L}{I|L}VV;[EP]{I|L}{M(Oxidation (M))|F}Q{I|L}{I|L}VV;{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}[AG]{I|L}{I|L}VV;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}T{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}[QP]{I|L}VV;{[QN]|[E{I|L}]|[KN]}PY[QP]{I|L}VV;[EP]YP[AG]{I|L}{I|L}VV 4.0712;3.7067;3.4096;3.1997;3.0451;2.8352;2.6627;2.6485;2.284;2.1361 -;-;-;-;-;-;-;-;-;- 270 1 1.57 55491.4 1.0 13981 5831 19811 HBL1_DMSO_200M_050219_1,19814 HBL1_DMSO_200M_050219_1,19814,MLQEPLLVV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19815 95.606 111.0 1437500.0 25 0 154500.0 -1 0 59 751.6990121249044 2252.075206974913 3 752.0337402224541 MULTI CID FTMS 0 0 0 19811 762095.75 1.0 0 0.0 4 3 {I|L}DA[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 10 -1 72.652 0.0 0.0 3.226 0.0 0.0 1099.5792121055565 0.0 1099.5792121055565 0.0 46.448565749036064 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.0 {I|L}DA[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3.226 - 325 1 1.57 124842.9 1.0 13982 5831 19811 HBL1_DMSO_200M_050219_1,19815 HBL1_DMSO_200M_050219_1,19815, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19816 95.61 185.0 683740.0 25 0 65928.0 -1 0 94 641.3183309216022 2561.2442178200085 4 641.5695068240166 MULTI CID FTMS 0 0 0 19811 441337.4375 0.2257900462432558 -2 0.1530303955078125 5 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 57.573 0.0 0.0 2.2479 0.0 0.0 0.0 1619.6973270752394 1619.6973270752394 2.4130337288954 0.0 0.0 0.0 0 1.5 1.2218487496163564 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 2.2479 - 1318 1 1.57 100763.3 1.0 13983 5831 19811 HBL1_DMSO_200M_050219_1,19816 HBL1_DMSO_200M_050219_1,19816, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19817 95.615 300.0 412310.0 25 0 19963.0 -1 0 111 1080.008419602731 2158.002286272262 2 1080.513110339642 MULTI CID FTMS 0 0 0 19811 414231.84375 1.0 0 0.0 6 3 WADAMS{I|L}DGG{M(Oxidation (M))|F}VY{I|L}A[KG] 17 -1 115.03 0.0 0.0 5.3305 0.0 0.0 358.19181371542464 0.0 358.19181371542464 0.0 74.64047305616072 0.0 0.0 0 2.004432191740108 0.0 0.0 0.3494850021680094 WADAMS{I|L}DGG{M(Oxidation (M))|F}VY{I|L}A[KG] 5.3305 - 6461 + 1 1.57 86294.3 1.0 13984 5831 19811 HBL1_DMSO_200M_050219_1,19817 HBL1_DMSO_200M_050219_1,19817, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19818 95.618 125.0 582280.0 25 0 48405.0 + -1 LKLRLPHCLEM 11 76 697.8888132108211 1393.7630734884422 2 697.8896972537041 MULTI CID FTMS 0 0 0 19811 391754.34375 0.992937517153051 -2 0.1530303955078125 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LKLRLPHCLEM_ REV__CHRNA2|p.V387M|1|0.12|ENSG00000120903|chr8:27463284-27463284|C/T|missense_variant 11.494710602746466 0.7960433852372589 3 {[QN]|[E{I|L}]|[KN]}[{I|L}P]K{[HG]|PP}V{I|L}EEM 12 -1 + 68.241 0.0 0.0 4.8961 4.8961 86.975 0.0 0.0 0.0 16.099367149974015 47.78303006573224 16.099367149974015 21.139433523068377 0 1.25 1.3010299956639813 0.2887254899964357 0.0 {[QN]|[E{I|L}]|[KN]}[{I|L}P]K{[HG]|PP}V{I|L}EEM;[{I|L}P]{[QN]|[E{I|L}]|[KN]}K{[HG]|PP}V{I|L}EEM;{[QN]|[E{I|L}]|[KN]}[{I|L}P]K{[HG]|PP}V{I|L}T[C(Carbamidomethyl (C))Q];{[QN]|[E{I|L}]|[KN]}[{I|L}P]K[RH]{I|L}T[C(Carbamidomethyl (C))Q];[{I|L}P]{[QN]|[E{I|L}]|[KN]}K{[HG]|PP}V{I|L}T[C(Carbamidomethyl (C))Q];[{I|L}P]{[QN]|[E{I|L}]|[KN]}K[RH]{I|L}T[C(Carbamidomethyl (C))Q] 4.8961;3.3794;2.9587;2.4843;1.442;0.96761 -;-;-;-;-;- 145 1 1.57 59084.9 1.0 13985 5831 19811 HBL1_DMSO_200M_050219_1,19818 HBL1_DMSO_200M_050219_1,19818,LKLRLPHCLEM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19819 95.621 147.0 607110.0 25 0 92583.0 + 37240 TILNTLQNI 9 127 515.300710219964 1028.586867506728 2 515.3024169802666 MULTI CID FTMS 0 0 0 19811 272609.90625 0.2447215047491617 -1 0.1007766723632812 8 Unmodified _TILNTLQNI_ ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL 61.357469665136826 0.0253304979873734 3 [{I|L}T]N{I|L}T 5 5 51.357 0.0 0.0 4.9929 0.0 0.0 0.0 483.2575577745592 483.2575577745592 26.6195437047216 0.0 0.0 0.0 0 0.0 2.0 1.5044321917401078 0.25 [{I|L}T]N{I|L}T 4.9929 - 1230 1 1.57 72491.1 1.0 13986 5831 19811 HBL1_DMSO_200M_050219_1,19819 HBL1_DMSO_200M_050219_1,19819,TILNTLQNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19820 95.624 158.0 464770.0 25 0 53898.0 + 39000 TVRELFEEL 9 119 568.3033218795773 1134.5920908259543 2 568.3024169802666 MULTI CID FTMS 0 0 0 19811 214197.09375 0.4193033758343787 3 -0.3137054443359375 9 Unmodified _TVRELFEEL_ ENSG00000150990|ENST00000308736|DHX37 22.65808497894818 0.2428932432760099 3 {[TV]|[{I|L}S]}RE{I|L}{M(Oxidation (M))|F}EE{I|L} 9 0 + 45.588 0.0 0.0 4.018 4.018 83.76 0.0 0.0 0.0 10.723506410013222 32.40085961185266 10.723506410013222 16.709412807357754 0 0.3807196863200844 1.3010299956639813 0.0 0.0 + + {[TV]|[{I|L}S]}RE{I|L}{M(Oxidation (M))|F}EE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{I|L}{M(Oxidation (M))|F}EE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L}{M(Oxidation (M))|F}EE{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{I|L}P]{I|L}{M(Oxidation (M))|F}EE{I|L};[C(Carbamidomethyl (C))K]T{M(Oxidation (M))|F}{I|L}[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.018;2.5453;2.3311;2.1946;0.0512 +;-;-;-;- + 206 1 1.57 61506.0 1.0 13987 5831 19811 HBL1_DMSO_200M_050219_1,19820 HBL1_DMSO_200M_050219_1,19820,TVRELFEEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19821 95.638 800.0 277230.0 25 0 28016.0 + 34929 SQIREMETLIL 11 164 666.8634470930997 1331.7123412529993 2 666.8642455935478 MULTI CID FTMS 0 0 0 19811 214516.859375 0.8414989542157084 -1 0.1007766723632812 10 Unmodified _SQIREMETLIL_ ENSG00000157456|ENST00000288207|CCNB2 41.34703777101937 0.1916454788238683 3 [{I|L}T][RN]EMET{I|L}{I|L}{I|L} 11 3 + 84.658 0.0 0.0 6.3571 6.3571 81.873 0.0 0.0 0.0 14.589806588945905 16.575773191777927 14.589806588945905 3.0102999566398125 0 0.8807196863200843 2.0 0.9876954943324544 0.2742275032520141 [{I|L}T][RN]EMET{I|L}{I|L}{I|L};[{I|L}T][RN]EMTE{I|L}{I|L}{I|L};[{I|L}T]{[RE]|[WV]}NMET{I|L}{I|L}{I|L};[{I|L}T]{[RE]|[WV]}NMTE{I|L}{I|L}{I|L};[{I|L}T][RN]EME{I|L}T{I|L}{I|L};{I|L}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}NMET{I|L}{I|L}{I|L};[{I|L}T]{[RE]|[WV]}GGMET{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}[WK]EMET{I|L}{I|L}{I|L};[{I|L}T][RN]EMKNT{I|L}{I|L};{[QS]|[NT]}[R{I|L}]EMET{I|L}{I|L}{I|L} 6.3571;6.131;5.9333;5.7073;5.4538;5.2615;5.2479;5.1009;5.0955;5.0909 -;-;-;-;-;-;-;-;-;+ + 7243 1 1.57 170363.5 0.8899999856948853 13988 5831 19811 HBL1_DMSO_200M_050219_1,19821 HBL1_DMSO_200M_050219_1,19821,SQIREMETLIL False True SQIREMETLIL 95.637728 666.864245593548 2550636.5 19811.0 ENSG00000157456|ENST00000288207|CCNB2 4.898154894510905 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19822 95.645 425.0 307050.0 25 0 22503.0 + -1 LLLSMMAPMQ 10 145 583.7854942541722 1165.5564355751444 2 583.7867309451103 MULTI CID FTMS 0 0 0 19811 191078.765625 1.0 0 0.0 11 2 Oxidation (M) _LLLSM(Oxidation (M))M(Oxidation (M))APMQ_ REV__ENSG00000129744|ENST00000250693|ART1 26.268140514670165 0.3785003716575977 3 {I|L}{I|L}{I|L}EN 5 -1 52.155 0.0 0.0 4.4747 0.0 0.0 0.0 580.1928804986936 580.1928804986936 24.78592539474739 0.0 0.0 0.0 0 0.5 2.0 0.7742275032520141 0.0 {I|L}{I|L}{I|L}EN 4.4747 - 711 + 1 1.57 100212.7 1.0 13989 5831 19811 HBL1_DMSO_200M_050219_1,19822 HBL1_DMSO_200M_050219_1,19822,LLLSMMAPMQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19823 95.65 255.0 412690.0 25 0 70674.0 18917 LAYNEIITI 9 133 525.2985554772602 0 525.2982665896416 PEAK CID FTMS 0 0 0 19811 215384.828125 0.8662754569922408 -1 0.1007766723632812 12 Unmodified _LAYNEIITI_ ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085|ACACA 57.47134341890925 0.0195089841803479 3 {I|L}AYN 4 5 21.324 0.0 0.0 2.0336 0.0 0.0 345.2270370469226 239.10471521549064 584.3317522624133 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.2396518287104437 + {I|L}AYN 2.0336 + + 677 + 1 1.57 84150.5 1.0 13990 5831 19811 HBL1_DMSO_200M_050219_1,19823 HBL1_DMSO_200M_050219_1,19823,LAYNEIITI True True SLFAGGMLRV 95.650064 525.298266589642 2867286.75 19811.0 ENSG00000184840|ENST00000332598|TMED9;;ENST00000513799.5_1_5:177019550-177022414:+|nuORF -0.0349137187004089 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19824 95.664 800.0 426090.0 25 0 26495.0 -1 0 163 854.7556511726688 2561.245124118206 3 855.0915405154228 MULTI CID FTMS 0 0 0 19811 187034.96875 0.2461138835324259 -2 0.1530303955078125 13 3 H{I|L}VEA{I|L}Y{I|L}V 9 -1 101.01 0.0 0.0 3.9438 0.0 0.0 0.0 1520.630550040642 1520.630550040642 21.169572423199767 0.0 0.0 0.0 0 3.667735320183944 1.5228787452803376 0.75 0.0 H{I|L}VEA{I|L}Y{I|L}V 3.9438 - 10624 + 1 1.57 227664.4 0.9100000262260436 13991 5831 19811 HBL1_DMSO_200M_050219_1,19824 HBL1_DMSO_200M_050219_1,19824, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19825 95.679 800.0 239600.0 25 0 22816.0 -1 0 140 1186.5547871823137 2371.095021431427 2 1187.050463855267 MULTI CID FTMS 0 0 0 19811 169354.359375 0.6186126593849441 -9 1.0588226318359375 14 3 {[QG]|[NA]}[TA]PPPPP[HQ]{I|L} 12 -1 54.636 0.0 0.0 2.3043 0.0 0.0 0.0 1147.4104260547272 1147.4104260547272 19.939075914556724 0.0 0.0 0.0 0 1.0 0.0 0.2887254899964357 2.341129063296272 {[QG]|[NA]}[TA]PPPPP[HQ]{I|L} 2.3043 - 22422 1 1.57 114077.6 0.8600000143051147 13992 5831 19811 HBL1_DMSO_200M_050219_1,19825 HBL1_DMSO_200M_050219_1,19825, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19826 95.693 800.0 207890.0 25 0 3469.1 -1 0 100 1178.874926745892 0 1178.874926745892 PEAK CID FTMS 0 0 0 -1 0 15 3 QY{M(Oxidation (M))|F} 3 -1 13.188 0.0 0.0 0.55981 0.0 0.0 783.0847401111217 1131.4467421808945 1914.531482292016 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QY{M(Oxidation (M))|F} 0.55981 - 95 + 1 1.57 96111.1 0.9100000262260436 13993 5831 19811 HBL1_DMSO_200M_050219_1,19826 HBL1_DMSO_200M_050219_1,19826, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19827 95.707 800.0 250540.0 25 0 7842.2 + -1 TILNTLQNI 9 149 1028.1516377193716 3081.4330837583148 3 1029.483447253704 MULTI CID FTMS 0 0 0 19811 150100.125 1.0 0 0.0 16 nc|ENSG00000239900|P30566-2|ADSL;ENSG00000239900|ENST00000623063|ADSL 3 {I|L}NQ{I|L}TPP[KT] 9 -1 56.428 0.0 0.0 1.8312 0.0 0.0 2070.85949394979 0.0 2070.85949394979 0.0 21.202199056998268 0.0 0.0 0 0.0 0.0 2.1861818737241734 2.003083433768431 {I|L}NQ{I|L}TPP[KT] 1.8312 - 18305 + 1 1.57 125935.1 0.9200000166893004 13994 5831 19811 HBL1_DMSO_200M_050219_1,19827 HBL1_DMSO_200M_050219_1,19827, False False TILNTLQNI 95.706701 1029.4834472537 6406086.71875 19811.0 nc|ENSG00000239900|P30566-2|ADSL;;ENSG00000239900|ENST00000623063|ADSL 5.241792678833008 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19828 95.716 459.0 168420.0 25 0 20378.0 + 33284 SFQDFVSHF 9 111 557.2549316287041 0 557.2549316287041 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _SFQDFVSHF_ ENSG00000066933|ENST00000356056|MYO9A;ENST00000563542.5_1_15:72185266-72338904:-|nuORF;nc|ENSG00000066933|B2RTY4-2|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A;nc|ENSG00000066933|B2RTY4-5|MYO9A 26.88365393820708 0.1386685954232994 3 D{M(Oxidation (M))|F}VSH 5 4 19.218 0.0 0.0 1.7275 0.0 0.0 362.16001113105614 162.0565584772094 524.2165696082656 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D{M(Oxidation (M))|F}VSH 1.7275 + + 100 + 1 1.57 66013.3 1.0 13995 5831 19811 HBL1_DMSO_200M_050219_1,19828 HBL1_DMSO_200M_050219_1,19828,SFQDFVSHF False True SFQDFVSHF 95.71603 557.254931628704 1550274.25 19811.0 nc|ENSG00000066933|B2RTY4-5|MYO9A;;ENST00000563542.5_1_15:72185266-72338904:-|nuORF;;ENSG00000066933|ENST00000356056|MYO9A;;nc|ENSG00000066933|B2RTY4-2|MYO9A;;nc|ENSG00000066933|B2RTY4-4|MYO9A 8.147783279418945 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19829 95.73 800.0 168420.0 25 0 12687.0 + 31153 RLPDMEMVINV 11 122 658.8390151376084 0 658.8390380740166 PEAK CID FTMS 0 0 0 19811 100199.78125 0.6357919696189761 -1 0.1007766723632812 18 Unmodified _RLPDMEMVINV_ ENSG00000163389|ENST00000295588|POGLUT1 30.43146612281011 0.2235167479916787 3 D{I|L}VMEMH{I|L}N 9 5 54.435 0.0 0.0 4.1374 0.0 0.0 116.0918224631151 114.05668054752186 230.1485030106369 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.8494850021680094 D{I|L}VMEMH{I|L}N 4.1374 - 208 + 1 1.57 108528.7 0.6299999952316284 13996 5831 19811 HBL1_DMSO_200M_050219_1,19829 HBL1_DMSO_200M_050219_1,19829,RLPDMEMVINV False True RLPDMEMVINV 95.729867 658.839038074017 1576760.5 19811.0 ENSG00000163389|ENST00000295588|POGLUT1 7.959865570068359 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19831 95.734 12.0 1167800.0 25 0 90538.0 -1 GVPLCSLAAFL 11 39 574.3108540834507 1146.6071552337014 2 574.3111450076103 MULTI CID FTMS 0 0 0 19830 3465092.75 0.4734618742221052 1 -0.1096954345703125 1 Carbamidomethyl (C) _GVPLC(Carbamidomethyl (C))SLAAFL_ chr12:68424595-68433284|41|31.15|0.45|6.12|-|0|TE_info:L2a,L2a_dup122968,L2,LINE,acceptor,-,68424396,68424595|None,LINC02384|2 2.9952420565917617 0.861016188266951 3 V 1 -1 0.71334 0.0 0.0 0.062213 0.0 0.0 964.4645751329186 80.05130182437733 1044.515876957296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.062213 + + 1 + 1 1.57 18513.7 1.0 13997 5832 19830 HBL1_DMSO_200M_050219_1,19831 HBL1_DMSO_200M_050219_1,19831,GVPLCSLAAFL False False False False TE_chimeric_transcript PXD020620_cell_line HBL1_DMSO_200M_050219_1 19832 95.736 28.0 588230.0 25 0 56797.0 4920 DGLLRVLTV 9 53 493.3051711892997 984.5957894453994 2 493.3054077029228 MULTI CID FTMS 0 0 0 19830 1633983.125 0.2850238439560322 3 -0.2898712158203125 2 Unmodified _DGLLRVLTV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 6.2057823575117 0.6980434486082533 3 V 1 8 11.42 0.0 0.0 1.1599 0.0 0.0 867.516289178601 0.0 867.516289178601 0.0 0.310739533744222 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1599 + + 9 + 1 1.57 17493.0 1.0 13998 5832 19830 HBL1_DMSO_200M_050219_1,19832 HBL1_DMSO_200M_050219_1,19832,DGLLRVLTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19833 95.737 25.0 677190.0 25 0 45668.0 + 1925 AMIELVERL 9 36 537.3051342646982 1072.5957155961962 2 537.3052245974541 MULTI CID FTMS 0 0 0 19830 2888006.0 1.0 0 0.0 3 Unmodified _AMIELVERL_ ENSG00000166326|ENST00000299413|TRIM44 12.240655878213236 0.5053430591993562 3 {[DS]|[MA]|[CV]|TT}{I|L}E{I|L} 5 4 41.198 0.0 0.0 3.841 0.0 0.0 0.0 512.2860201471311 512.2860201471311 41.197887582883936 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 + {[DS]|[MA]|[CV]|TT}{I|L}E{I|L} 3.841 + + 8 + 1 1.57 22217.4 1.0 13999 5832 19830 HBL1_DMSO_200M_050219_1,19833 HBL1_DMSO_200M_050219_1,19833,AMIELVERL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19834 95.738 30.0 709170.0 25 0 56089.0 + 39258 VAAPLFKL 8 44 429.776080166156 857.537607399112 2 429.7761413455009 MULTI CID FTMS 0 0 0 19830 2762251.0 0.2502009940464458 -1 0.1337966918945312 4 Unmodified _VAAPLFKL_ REV__ENSG00000115602|ENST00000233954|IL1RL1;REV__ENST00000463990.1_1_2:102953760-102955562:+|nuORF;REV__ENST00000482701.5_1_2:102953760-102958709:+|nuORF;REV__nc|ENSG00000115602|Q01638-2|IL1RL1;REV__nc|ENSG00000115602|Q01638-3|IL1RL1 15.768221252438446 0.6779680726941459 3 PE 2 -1 20.969 0.0 0.0 2.4453 0.0 0.0 613.4155750959 0.0 613.4155750959 0.0 8.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 PE 2.4453 - 19 1 1.57 26070.5 1.0 14000 5832 19830 HBL1_DMSO_200M_050219_1,19834 HBL1_DMSO_200M_050219_1,19834,VAAPLFKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19835 95.739 31.0 2656400.0 25 0 363160.0 + 9741 FMFDEKLVTV 10 88 614.817959720799 1227.6213665083978 2 614.8182861208916 MULTI CID FTMS 0 0 0 19830 1742707.5 0.7608725787322033 1 -0.1096954345703125 5 Unmodified _FMFDEKLVTV_ ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C 57.24910588100465 0.0438022649904578 3 {[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 11 10 + 68.84 0.0 0.0 5.6076 5.6076 80.634 0.0 0.0 0.0 11.01274818410505 3.7628749457997657 3.7628749457997657 3.7628749457997657 0 0.4247425010840047 1.2218487496163564 2.118415180652539 0.0 {[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}VTM{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}VTV{[YD]|[{M(Oxidation (M))|F}M]};{[TV]|[{I|L}S]}G{I|L}DV{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}M{M(Oxidation (M))|F}V{[TV]|[{I|L}S]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}D{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}G{I|L}DV{M(Oxidation (M))|F}TM{M(Oxidation (M))|F}V;{[{M(Oxidation (M))|F}D]|MM}EK{I|L}VA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}G{I|L}VD{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}D{M(Oxidation (M))|F}VTM{M(Oxidation (M))|F}V 5.6076;5.3011;5.0418;4.873;4.7987;4.7105;4.5664;4.5366;4.4448;4.404 -;-;-;-;-;-;-;-;-;- 1462 1 1.57 68215.3 1.0 14001 5832 19830 HBL1_DMSO_200M_050219_1,19835 HBL1_DMSO_200M_050219_1,19835,FMFDEKLVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19836 95.74 33.0 2730600.0 25 0 284860.0 + 27129 PFLWRVGP 8 87 486.276888480758 970.539224028316 2 486.2764465212822 MULTI CID FTMS 0 0 0 19830 1350275.875 0.5449573093003794 -4 0.4346694946289062 6 Unmodified _PFLWRVGP_ REV__ENST00000567034.5_1_16:30198826-30199264:+|nuORF 15.768221252438446 0.6779680726941459 3 WP{M(Oxidation (M))|F}{I|L} 4 -1 51.186 0.0 0.0 5.2739 0.0 0.0 0.0 424.2322194986141 424.2322194986141 25.154856465551987 0.0 0.0 0.0 0 0.6237125054200234 1.3010299956639813 0.0 0.0 WP{M(Oxidation (M))|F}{I|L} 5.2739 - 76 + 1 1.57 73988.0 1.0 14002 5832 19830 HBL1_DMSO_200M_050219_1,19836 HBL1_DMSO_200M_050219_1,19836,PFLWRVGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19837 95.741 43.0 1950700.0 25 0 259820.0 + 11512 GIMDRFLQV 9 99 539.7894427191356 1077.5643325050712 2 539.7900268435478 MULTI CID FTMS 0 0 0 19830 961024.375 0.4712253085702787 -1 0.1337966918945312 7 Unmodified _GIMDRFLQV_ ENSG00000157456|ENST00000288207|CCNB2 59.36838082759317 0.0264317782606298 3 G{I|L}VE[VS][{M(Oxidation (M))|F}T]QV 10 5 + 70.544 0.0 0.0 6.5466 6.5466 80.219 0.0 0.0 0.0 37.13560197082276 1.5186375580366729 1.5186375580366729 1.7339374311232802 0 1.424742501084005 2.0 0.3494850021680094 1.1989700043360187 G{I|L}VE[VS][{M(Oxidation (M))|F}T]QV;G{I|L}V{[DS]|[MA]|[CV]|TT}{I|L}[{M(Oxidation (M))|F}T]QV;G{I|L}VE[VS][{M(Oxidation (M))|F}T]N{I|L};G{I|L}V{[DS]|[MA]|[CV]|TT}{I|L}[{M(Oxidation (M))|F}T]N{I|L};G{I|L}MG[RP][YV]SV;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{M(Oxidation (M))|F}{I|L}G{I|L}QV;{[QN]|[E{I|L}]|[KN]}V{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}QV;{[VA]|[{I|L}G]}G[R{M(Oxidation (M))|F}]{[MG]|[TS]}E{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{M(Oxidation (M))|F}{I|L}G{I|L}[AG]V 6.5466;6.3857;5.4764;5.3155;5.1782;3.8899;3.4654;3.4307;3.2702;3.0394 -;-;-;-;-;-;-;-;-;- 911 + 1 1.57 70054.2 1.0 14003 5832 19830 HBL1_DMSO_200M_050219_1,19837 HBL1_DMSO_200M_050219_1,19837,GIMDRFLQV True True GIMDRFLQV 95.741476 539.790026843548 21791522.0 19830.0 ENSG00000157456|ENST00000288207|CCNB2 6.64372714360555 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19838 95.743 48.0 1264700.0 25 0 83424.0 + + -1 IPWLQYNEV 9 92 581.3042992557498 1160.5940455782995 2 581.3013793826103 MULTI CID FTMS 0 0 0 19830 829994.625 0.5063644861103094 1 -0.1096954345703125 8 Oxidation (M) _PWLLTNGM(Oxidation (M))IT_ nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2 11.640296217721598 0.652229146672156 3 [WP]{I|L}Q{I|L}YNVE 9 -1 + 66.833 0.0 0.0 5.7585 5.7585 79.936 0.0 0.0 0.0 10.48455006504028 10.48455006504028 10.48455006504028 3.0102999566398125 0 0.0 1.3979400086720375 0.0 0.0 [WP]{I|L}Q{I|L}YNVE;[WP]{I|L}{I|L}QYNVE;[WP]{I|L}QY{I|L}NVE;[WP]{I|L}[AG]{I|L}YNVE;[WP]{I|L}Q{I|L}YGGVE;[WP]{I|L}{I|L}[AG]YNVE;[WP]{I|L}{I|L}QYGGVE;[WP]{I|L}Q{I|L}Y[DV]Q;[{I|L}P]WQ{I|L}YNVE;[WP]{I|L}QY{I|L}GGVE 5.7585;5.4991;5.1562;4.9651;4.9651;4.7057;4.7057;4.554;4.5252;4.3628 -;-;-;-;-;-;-;-;-;- 593 1 1.57 51684.5 1.0 14004 5832 19830 HBL1_DMSO_200M_050219_1,19838 HBL1_DMSO_200M_050219_1,19838,PWLLTNGMIT False False IPWLQYNEV 95.742767 581.30137938261 7414408.5 19830.0 nc|ENSG00000198961|O43164-2|PJA2;;ENSG00000198961|ENST00000361189|PJA2 5.200000921885173 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19839 95.744 63.0 898220.0 25 0 81628.0 + 10259 FQVGDGIGMDL 11 85 576.2728358179324 1150.5311187026648 2 576.2743408083916 MULTI CID FTMS 0 0 0 19830 519851.46875 0.3714494337886199 1 -0.1096954345703125 9 Unmodified _FQVGDGIGMDL_ ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF;ENST00000584992.1_1_18:21044583-21047491:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3 11.494710602746466 0.7960433852372589 3 [MN]NDT[C(Carbamidomethyl (C))K]R{I|L} 9 9 + 22.342 0.0 0.0 1.9419 1.9419 77.893 0.0 0.0 0.0 4.906812209816639 0.1233373507372483 0.1233373507372483 9.208187539523752 0 0.0 0.0 0.0 0.0 [MN]NDT[C(Carbamidomethyl (C))K]R{I|L};[MN]GGDT[C(Carbamidomethyl (C))K]R{I|L} 1.9419;1.1415 -;- 129 + 1 1.57 47487.4 1.0 14005 5832 19830 HBL1_DMSO_200M_050219_1,19839 HBL1_DMSO_200M_050219_1,19839,FQVGDGIGMDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19840 95.748 172.0 659570.0 25 0 101280.0 33446 SICYLLGQPE 10 125 561.7799432375388 1121.5453335418774 2 561.7811767458916 MULTI CID FTMS 0 0 0 19830 486987.4375 0.9126725961461312 -1 0.1337966918945312 10 Unmodified _SICYLLGQPE_ ENSG00000164068|ENST00000327697|RNF123;ENST00000487805.6_1_3:49750857-49758735:+|nuORF;nc|ENSG00000164068|Q5XPI4-2|RNF123;RNF123|p.R1184H|1|0.39|ENSG00000164068|chr3:49720561-49720561|G/A|missense_variant 32.78568957990786 0.2337485590374503 3 {[QV]|[N{I|L}]|[RA]|[KV]}SD{I|L}{I|L} 6 7 47.172 0.0 0.0 4.206 0.0 0.0 0.0 463.1673623510671 463.1673623510671 5.739188121990011 0.0 0.0 0.0 0 0.3494850021680094 0.7958800173440752 0.9876954943324544 1.3243923658886183 {[QV]|[N{I|L}]|[RA]|[KV]}SD{I|L}{I|L} 4.206 - 600 1 1.57 89224.0 1.0 14006 5832 19830 HBL1_DMSO_200M_050219_1,19840 HBL1_DMSO_200M_050219_1,19840,SICYLLGQPE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19841 95.754 331.0 75006.0 25 0 9784.2 20298 LLECRWREM 9 46 618.3038637065497 1234.5931744798993 2 618.3050414919853 MULTI CID FTMS 0 0 0 19830 369809.28125 0.0335789170780465 7 -0.7540664672851562 11 Unmodified _LLECRWREM_ ENSG00000071054|ENST00000324219|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4 4.3292370932331545 0.7635526921153418 3 [{I|L}A]G 3 8 24.437 0.0 0.0 1.9794 0.0 0.0 0.0 990.4267523209728 990.4267523209728 11.249387366083 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]G 1.9794 - 23 1 1.57 29286.3 1.0 14007 5832 19830 HBL1_DMSO_200M_050219_1,19841 HBL1_DMSO_200M_050219_1,19841,LLECRWREM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19842 95.757 179.0 537350.0 25 0 75023.0 + 31872 RTLDFDPLL 9 108 545.3003992159358 1088.5862454986716 2 545.3011352419853 MULTI CID FTMS 0 0 0 19830 345636.25 0.378936840616541 -1 0.1337966918945312 12 Unmodified _RTLDFDPLL_ ENSG00000135334|ENST00000257787|AKIRIN2 29.84058131909904 0.1515068451768857 3 [{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}DP{I|L}{I|L} 9 4 + 71.009 0.0 0.0 6.523 6.523 92.602 0.0 0.0 0.0 18.212112250009653 49.14172671213214 18.212112250009653 23.46787486224656 0 0.7887254899964358 2.0 0.4247425010840047 0.0 [{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}DP{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}G[VS]{M(Oxidation (M))|F}DP{I|L}{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}{M(Oxidation (M))|F}DP{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}DP{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))K][MT]P{I|L}{I|L} 6.523;4.3672;4.1744;3.832;3.0624 -;-;-;-;- 272 1 1.57 86347.1 1.0 14008 5832 19830 HBL1_DMSO_200M_050219_1,19842 HBL1_DMSO_200M_050219_1,19842,RTLDFDPLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19843 95.761 181.0 798810.0 25 0 37527.0 -1 0 96 791.372936740873 2371.0969808228188 3 791.7089721560478 MULTI CID FTMS 0 0 0 19830 315861.6875 0.3283238768953155 -4 0.4346694946289062 13 3 {[HG]|PP}APPGDCNRQM 12 -1 39.556 0.0 0.0 1.6682 0.0 0.0 0.0 1104.5457631192592 1104.5457631192592 3.888111427747596 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {[HG]|PP}APPGDCNRQM 1.6682 - 10347 1 1.57 107412.8 1.0 14009 5832 19830 HBL1_DMSO_200M_050219_1,19843 HBL1_DMSO_200M_050219_1,19843, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19844 95.765 255.0 710510.0 25 0 73450.0 + 3032 AVLDNFVYV 9 172 520.2768363768887 1038.5391198205773 2 520.2767211794853 MULTI CID FTMS 0 0 0 19830 303003.09375 0.3674280691867266 -1 0.1337966918945312 14 Unmodified _AVLDNFVYV_ ENSG00000167487|ENST00000300976|KLHL26 28.486842064014134 0.1687311288560894 3 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}ND{I|L} 6 6 33.809 0.0 0.0 3.2554 0.0 0.0 0.0 376.1870497550892 376.1870497550892 0.7525749891599531 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 1.174742501084005 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}ND{I|L} 3.2554 - 2758 1 1.57 139162.3 1.0 14010 5832 19830 HBL1_DMSO_200M_050219_1,19844 HBL1_DMSO_200M_050219_1,19844,AVLDNFVYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19845 95.779 800.0 156820.0 25 0 13392.0 + 33486 SIIEYLPTLR 10 130 602.8508182088378 1203.6870834844756 2 602.8510619997978 MULTI CID FTMS 0 0 0 19830 207625.28125 0.3620626929994804 3 -0.2898712158203125 15 Unmodified _SIIEYLPTLR_ ENSG00000176208|ENST00000321990|ATAD5 51.41523569358685 0.0718446036348414 3 {[TV]|[{I|L}S]}{I|L}EY{I|L}[RP]T{I|L} 10 2 + 71.349 0.0 0.0 5.9275 5.9275 92.123 0.0 0.0 0.0 54.885654119029255 5.171346477223366 5.171346477223366 71.34856861459255 0 1.1549471895720984 2.0 0.7742275032520141 0.4247425010840047 {[TV]|[{I|L}S]}{I|L}EY{I|L}[RP]T{I|L} 5.9275 - 435 + 1 1.57 91816.9 0.8500000238418579 14011 5832 19830 HBL1_DMSO_200M_050219_1,19845 HBL1_DMSO_200M_050219_1,19845,SIIEYLPTLR True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19846 95.793 800.0 175780.0 25 0 16950.0 21393 LPFVVTSSI 9 155 481.78170468713375 961.5488564410676 2 481.7817565798759 MULTI CID FTMS 0 0 0 19830 200301.375 1.0 0 0.0 16 Unmodified _LPFVVTSSI_ ENSG00000143147|ENST00000682931|GPR161;ENST00000493800.1_1_1:168059784-168074118:-|nuORF;nc|ENSG00000143147|Q8N6U8-2|GPR161;nc|ENSG00000143147|Q8N6U8-6|GPR161 40.44857923139169 0.0729940656229577 3 {[TV]|[{I|L}S]}S 3 6 28.244 0.0 0.0 2.9374 0.0 0.0 0.0 671.3774751756956 671.3774751756956 -0.6119790752951815 0.0 -0.6119790752951815 0.0 0 0.0 2.0 0.3807196863200844 0.0 + {[TV]|[{I|L}S]}S 2.9374 + + 940 1 1.57 106421.1 0.7099999785423279 14012 5832 19830 HBL1_DMSO_200M_050219_1,19846 HBL1_DMSO_200M_050219_1,19846,LPFVVTSSI True True TVLPFVSTV 95.793113 481.781756579876 986681.8125 19830.0 ENST00000589179.5_1_12:53590293-53590665:-|nuORF;;nc|ENSG00000139626|P26010-2|ITGB7;;ENSG00000139626|ENST00000267082|ITGB7 3.3449163834253945 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19847 95.807 800.0 269400.0 25 0 39092.0 + 28110 PPLVLPAL 8 173 410.27058238375855 818.5266118343171 2 410.2703430056572 MULTI CID FTMS 0 0 0 19830 167685.828125 0.4453508181058242 4 -0.4047393798828125 17 Unmodified _PPLVLPAL_ ENSG00000188352|ENST00000338382|FOCAD 52.33426049586781 0.1282678332820461 3 [{I|L}P]PV{I|L}PA{I|L} 8 2 + 46.08 0.0 0.0 5.6296 5.6296 78.176 0.0 0.0 0.0 17.58832315869526 9.653500133247732 9.653500133247732 2.218487496163561 0 0.6237125054200234 1.5228787452803376 0.0 0.0 [{I|L}P]PV{I|L}PA{I|L};[{I|L}P]VP{I|L}PA{I|L};[{I|L}P]P{I|L}VPA{I|L};[{I|L}P]PVAP{I|L}{I|L};[{I|L}P]VPAP{I|L}{I|L};[{I|L}P]P{I|L}GP{I|L}{I|L};{[HG]|PP}{I|L}V{I|L}PA{I|L};{[HG]|PP}{I|L}{I|L}VPA{I|L};{[HG]|PP}{I|L}VAP{I|L}{I|L};{[HG]|PP}{I|L}{I|L}GP{I|L}{I|L} 5.6296;5.3586;5.0467;4.8893;4.6183;4.3064;3.283;2.7001;2.5426;1.9597 -;-;-;-;-;-;+;-;-;- + 656 1 1.57 170734.6 0.5899999737739563 14013 5832 19830 HBL1_DMSO_200M_050219_1,19847 HBL1_DMSO_200M_050219_1,19847,PPLVLPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19848 95.822 800.0 306240.0 25 0 43467.0 + 14058 IALPKVGLI 9 187 462.3182209181965 922.621888903193 2 462.3184081912041 MULTI CID FTMS 0 0 0 19830 153039.71875 1.0 0 0.0 18 Unmodified _IALPKVGLI_ ENSG00000146409|ENST00000275227|SLC18B1 36.04419817259434 0.0971720506436186 3 {I|L}A{I|L}P 4 5 55.165 0.0 0.0 5.9792 0.0 0.0 0.0 525.341198782646 525.341198782646 38.96713777483761 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.0 0.0 + {I|L}A{I|L}P 5.9792 + + 433 + 1 1.57 186224.6 0.5799999833106995 14014 5832 19830 HBL1_DMSO_200M_050219_1,19848 HBL1_DMSO_200M_050219_1,19848,IALPKVGLI True True IALPKVGLI 95.822209 462.318408191204 1530073.25 19830.0 ENSG00000146409|ENST00000275227|SLC18B1 3.639726638793945 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19849 95.836 800.0 259350.0 25 0 26187.0 + 2640 ATADDIRALLI 11 189 586.3384796866014 1170.6624064400028 2 586.3395873904228 MULTI CID FTMS 0 0 0 19830 141811.6875 0.6323535118848096 -1 0.1337966918945312 19 Unmodified _ATADDIRALLI_ ENSG00000173273|ENST00000310430|TNKS 80.89551112106177 0.0069906411478691 3 [TA]DAD{I|L}RA{I|L}{I|L}{I|L} 11 2 + 83.272 0.0 0.0 7.1132 7.1132 87.766 0.0 0.0 0.0 11.553082877329985 11.553082877329985 11.553082877329985 6.098853288399184 0 2.667735320183944 2.0 1.1936726795685342 0.0 [TA]DAD{I|L}RA{I|L}{I|L}{I|L};[TA]AQQAATA{I|L}{I|L}{I|L};[TA]DAD{I|L}R{I|L}A{I|L}{I|L};[TA]AQ[RN]TA{I|L}{I|L}{I|L};ATAD[{M(Oxidation (M))|F}V][KP]P{I|L}{I|L};[TA]AQQAA{I|L}TA{I|L}{I|L};ATW[{M(Oxidation (M))|F}V][KP]P{I|L}{I|L};[TA]AQ[AG]AATA{I|L}{I|L}{I|L};[TA]AQQAAT{I|L}A{I|L}{I|L};[TA]AQQSRA{I|L}{I|L}{I|L} 7.1132;6.5923;6.2695;6.1762;6.1264;5.9426;5.8218;5.8151;5.7486;5.7409 -;-;-;-;-;-;-;-;-;- 6991 1 1.57 158644.9 0.6499999761581421 14015 5832 19830 HBL1_DMSO_200M_050219_1,19849 HBL1_DMSO_200M_050219_1,19849,ATADDIRALLI True True ATADDIRALLI 95.83604 586.339587390423 1199356.75 19830.0 ENSG00000173273|ENST00000310430|TNKS 4.626665751139323 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19850 95.84 119.0 395800.0 25 0 69138.0 + 15849 ISMSLELQV 9 85 510.2745625487382 1018.5345721642764 2 510.2747985720634 MULTI CID FTMS 0 0 0 19830 136828.21875 0.1175471506439866 7 -0.7540664672851562 20 Unmodified _ISMSLELQV_ REV__ENST00000320895.9_1_5:1318406-1318487:-|nuORF 21.74664581756881 0.2544899275067181 3 N{I|L} 2 -1 17.435 0.0 0.0 1.7118 0.0 0.0 773.3966459941577 0.0 773.3966459941577 0.0 5.445312593723983 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 N{I|L} 1.7118 - 85 + 1 1.57 45346.4 1.0 14016 5832 19830 HBL1_DMSO_200M_050219_1,19850 HBL1_DMSO_200M_050219_1,19850,ISMSLELQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19852 95.844 43.0 1838800.0 25 0 246700.0 + 37557 TLIDLPGITRV 11 65 599.3637472949681 1196.712941656736 2 599.3641845583916 MULTI CID FTMS 0 0 0 19851 1423922.0 0.7231402052175088 1 -0.0702133178710937 1 Unmodified _TLIDLPGITRV_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 46.0223103267499 0.1396584557920269 3 [{I|L}T]{I|L}VE[KA]{I|L}DE 10 7 66.93 0.0 0.0 5.5928 0.0 0.0 0.0 82.06701837711171 82.06701837711171 55.14706050896008 0.0 0.0 0.0 0 0.8252574989159953 2.0 0.805462187404089 0.4247425010840047 [{I|L}T]{I|L}VE[KA]{I|L}DE 5.5928 - 313 + 1 1.57 64989.5 1.0 14017 5833 19851 HBL1_DMSO_200M_050219_1,19852 HBL1_DMSO_200M_050219_1,19852,TLIDLPGITRV False True TLIDLPGITRV 95.844373 599.364184558392 44316186.0 19851.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1 6.421408812204997 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19853 95.846 25.0 2300100.0 25 0 247930.0 + 2898 AVFPDDMPTL 10 74 553.2649900757076 1104.515427218215 2 553.2658569216728 MULTI CID FTMS 0 0 0 19851 2487148.5 1.0 0 0.0 2 Unmodified _AVFPDDMPTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 34.10243960390752 0.2198439752719791 3 [TP]{I|L}[DC]{M(Oxidation (M))|F}VPT{I|L} 10 6 [TP]{I|L}[DC]{M(Oxidation (M))|F}V + + 25.802 21.075 2.7182 2.336 2.336 49.186 0.0 0.0 0.0 0.0 0.2557626122369072 0.0 0.0 0 0.4247425010840047 0.0 0.6861818737241735 0.0 [TP]{I|L}[DC]{M(Oxidation (M))|F}VPT{I|L} 2.336 - 318 + 1 1.57 51013.0 1.0 14018 5833 19851 HBL1_DMSO_200M_050219_1,19853 HBL1_DMSO_200M_050219_1,19853,AVFPDDMPTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19854 95.847 20.0 4100800.0 25 0 634080.0 + 10618 FVNDIFERI 9 63 576.805936717175 1151.59732050115 2 576.8063232302666 MULTI CID FTMS 0 0 0 19851 2922721.5 0.0831158266703522 -3 0.344268798828125 3 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 37.07464296494664 0.0915153923251136 3 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}E{I|L}R 9 2 + 77.802 0.0 0.0 6.756 6.756 81.371 0.0 0.0 0.0 11.706962271689749 1.9188552623891293 1.9188552623891293 1.9188552623891293 0 1.274227503252014 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VN{I|L}D{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}VN{I|L}D{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}V{I|L}ND{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}V{I|L}ND{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGG{I|L}D{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}VGG{I|L}D{M(Oxidation (M))|F}ER{I|L} 6.756;6.5894;6.0604;5.9564;5.8938;5.7898;5.4955;5.3289;5.2608;5.0942 -;+;-;-;-;-;-;-;-;- + 404 + 1 1.57 67645.1 1.0 14019 5833 19851 HBL1_DMSO_200M_050219_1,19854 HBL1_DMSO_200M_050219_1,19854,FVNDIFERI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19855 95.848 22.0 3286300.0 25 0 588250.0 + 1516 ALIEKLVEL 9 85 514.3234928833207 1026.6324328334413 2 514.3237792849541 MULTI CID FTMS 0 0 0 19851 2423962.75 1.0 0 0.0 4 Unmodified _ALIEKLVEL_ ENSG00000014138|ENST00000265465|POLA2;ENST00000532469.1_1_11:65029724-65047127:+|nuORF 69.10491478415734 0.0214449631113747 3 [{I|L}A]{I|L}{M(Oxidation (M))|F}V{I|L}{I|L}EG 9 4 74.351 0.0 0.0 7.2423 0.0 0.0 0.0 68.05138574771718 68.05138574771718 25.389953632274143 0.0 0.0 0.0 0 0.7742275032520141 2.0 1.579689690656103 0.0 [{I|L}A]{I|L}{M(Oxidation (M))|F}V{I|L}{I|L}EG 7.2423 - 1395 + 1 1.57 60277.0 1.0 14020 5833 19851 HBL1_DMSO_200M_050219_1,19855 HBL1_DMSO_200M_050219_1,19855,ALIEKLVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19856 95.849 20.0 2902300.0 25 0 249380.0 + 44767 YPLQGPGLLSV 11 106 572.3233133078575 1142.6320736825148 2 572.3241454958916 MULTI CID FTMS 0 0 0 19851 2172293.75 0.7327020366834404 2 -0.18017578125 5 Unmodified _YPLQGPGLLSV_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 36.39500950444726 0.267929034476522 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QG[PG]{I|L}{I|L}SV 11 0 + 48.827 0.0 0.0 4.2732 4.2732 72.695 0.0 0.0 0.0 1.6964766320983955 1.6964766320983955 1.6964766320983955 1.6964766320983955 0 1.1237125054200234 0.9208187539523752 0.2887254899964357 0.3054621874040891 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QG[PG]{I|L}{I|L}SV;[VS]QQ[RN]{I|L}{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}Q[NP]{I|L}{I|L}SV;[VS]QQ{I|L}[RN]{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}[RN][HT]SV;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[RN]{I|L}[HT]SV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[AG][NP]{I|L}{I|L}SV;[Q{I|L}]PGG{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}SV;[Q{I|L}]PN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}SV;[Q{I|L}][NS][RN]{I|L}{I|L}W 4.2732;4.1247;4.1152;3.8612;3.6683;3.4048;3.3132;3.3046;3.256;3.242 +;-;-;-;-;-;-;-;-;- + 562 1 1.57 51316.7 1.0 14021 5833 19851 HBL1_DMSO_200M_050219_1,19856 HBL1_DMSO_200M_050219_1,19856,YPLQGPGLLSV False True YPLQGPGLLSV 95.849085 572.324145495892 121046216.0 19851.0 nc|ENSG00000113569|O75694-2|NUP155;;ENSG00000113569|ENST00000231498|NUP155 5.381345748901367 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19857 95.85 20.0 3001800.0 25 0 167850.0 -1 LMFQIRYI 8 95 550.3003780171566 1098.5862031011131 2 549.8047973513603 MULTI CID FTMS 0 0 0 19851 1721350.375 1.0 0 0.0 6 Oxidation (M) _LM(Oxidation (M))FQIRYI_ nc|ENSG00000163349|Q86Z02-4|HIPK1 19.438996006549623 0.6237395211498085 3 YP{M(Oxidation (M))|F} 3 -1 35.93 0.0 0.0 3.2706 0.0 0.0 0.0 688.3806727184326 688.3806727184326 5.575287319555642 0.0 0.0 0.0 0 0.2742275032520141 1.3010299956639813 0.0 0.0 YP{M(Oxidation (M))|F} 3.2706 - 261 + 1 1.57 57465.0 1.0 14022 5833 19851 HBL1_DMSO_200M_050219_1,19857 HBL1_DMSO_200M_050219_1,19857,LMFQIRYI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 19858 95.852 52.0 1521800.0 25 0 136020.0 + 22539 LPWLEARI 8 73 499.2951652573843 996.5757775815688 2 499.2953063845634 MULTI CID FTMS 0 0 0 19851 1072670.75 0.9446054005215856 1 -0.0702133178710937 7 Unmodified _LPWLEARI_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 37.97399986684836 0.2681860861828418 3 {I|L}PW{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 8 0 + 73.153 0.0 0.0 7.3405 7.3405 86.428 0.0 0.0 0.0 60.93494710484904 3.645162531850872 3.645162531850872 4.247425010840047 0 0.805462187404089 2.0 0.3494850021680094 0.0 + + {I|L}PW{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{I|L}P{I|L}WE{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{I|L}{I|L}PWE{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[{I|L}P]W[RN]RR;[WP]{I|L}[RN]RR 7.3405;6.9143;5.3822;3.2576;2.9325 +;-;-;-;- + 109 + 1 1.57 65105.2 1.0 14023 5833 19851 HBL1_DMSO_200M_050219_1,19858 HBL1_DMSO_200M_050219_1,19858,LPWLEARI False True LPWLEARI 95.851612 499.295306384563 12411869.0 19851.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 4.038775285085042 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19859 95.853 41.0 1783200.0 25 0 185690.0 + 22990 LSGVLALVEL 10 82 507.3157868878592 1012.6170208425184 2 507.3144103884697 MULTI CID FTMS 0 0 0 19851 1064751.375 0.1255729942283082 -3 0.344268798828125 8 Unmodified _LSGVLALVEL_ REV__ENSG00000169418|ENST00000368680|NPR1 47.74868867922204 0.0933642699623533 3 {[QN]|[E{I|L}]|[KN]}VKA{I|L}VE{I|L} 9 -1 + 69.413 0.0 0.0 6.8548 6.8548 80.945 0.0 0.0 0.0 5.144979867444221 14.973024840566469 5.144979867444221 1.5186375580366729 0 0.7742275032520141 0.9208187539523752 0.5629529932484498 0.0 {[QN]|[E{I|L}]|[KN]}VKA{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}AVE{I|L};{[QN]|[E{I|L}]|[KN]}V{I|L}KAVE{I|L};{[QN]|[E{I|L}]|[KN]}VAK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}KA{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}A{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}AVE{I|L};{[QN]|[E{I|L}]|[KN]}G{I|L}K{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}AVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KAVE{I|L} 6.8548;6.7048;6.5309;6.3836;6.3467;6.2233;6.1967;6.1645;6.0733;6.0228 -;-;-;-;-;-;-;-;-;- 1687 1 1.57 62422.5 1.0 14024 5833 19851 HBL1_DMSO_200M_050219_1,19859 HBL1_DMSO_200M_050219_1,19859,LSGVLALVEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19860 95.855 81.0 931110.0 25 0 105230.0 + 30786 RIFGESIMIGV 11 69 611.3369592674288 1220.6593656016576 2 611.3369018435478 MULTI CID FTMS 0 0 0 19851 792621.25 0.6360586047370089 2 -0.18017578125 9 Unmodified _RIFGESIMIGV_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35;nc|ENSG00000163002|Q8NFH5-3|NUP35 35.61225514009592 0.279986979807413 3 S{I|L}M{I|L}GV 6 5 60.196 0.0 0.0 4.9314 0.0 0.0 602.3217640607437 0.0 602.3217640607437 0.0 41.86812845116052 0.0 0.0 0 1.25 0.0 0.805462187404089 0.0 + S{I|L}M{I|L}GV 4.9314 + + 123 1 1.57 62268.1 1.0 14025 5833 19851 HBL1_DMSO_200M_050219_1,19860 HBL1_DMSO_200M_050219_1,19860,RIFGESIMIGV False True RIFGESIMIGV 95.854639 611.336901843548 33831792.0 19851.0 ENSG00000163002|ENST00000295119|NUP35;;nc|ENSG00000163002|Q8NFH5-2|NUP35;;nc|ENSG00000163002|Q8NFH5-3|NUP35 7.356406370798747 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19861 95.857 89.0 774640.0 25 0 139410.0 + 13696 HQIPEFDNLYL 11 63 694.8458437851517 1387.677134637103 2 694.8464233279228 MULTI CID FTMS 0 0 0 19851 726442.3125 0.69752367832051 2 -0.18017578125 10 Unmodified _HQIPEFDNLYL_ ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2-3|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1 51.41523569358685 0.1097924807909074 3 [HQ]{I|L}[EP]{M(Oxidation (M))|F}DN{I|L}Y{I|L} 11 0 + 61.796 0.0 0.0 4.4532 4.4532 81.286 0.0 0.0 0.0 4.066100692891936 37.80008452963799 4.066100692891936 8.521151317737043 0 0.718765315847925 0.0 0.7059771852360797 1.1307196863200843 + + [HQ]{I|L}[EP]{M(Oxidation (M))|F}DN{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}ND{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR];[HQ]{I|L}[EP]{M(Oxidation (M))|F}DGG{I|L}Y{I|L};[HQ]{I|L}[YE]Y{M(Oxidation (M))|F}{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}GGD{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR];[HQ]{I|L}[EP][DN]{M(Oxidation (M))|F}{I|L}Y{I|L};[DN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}[HQ]{I|L}Y{I|L};{[{M(Oxidation (M))|F}D]|MM}[EP]N{I|L}[HQ]{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}{M(Oxidation (M))|F}[DN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR];[DN]{M(Oxidation (M))|F}[EP]{I|L}[HQ]{I|L}Y{I|L} 4.4532;3.8391;3.7954;3.4186;3.1787;3.102;2.9025;2.5587;2.4879;2.4687 +;-;-;-;-;-;-;-;-;- + 225 1 1.57 63212.9 1.0 14026 5833 19851 HBL1_DMSO_200M_050219_1,19861 HBL1_DMSO_200M_050219_1,19861,HQIPEFDNLYL True True HQIPEFDNLYL 95.856623 694.846423327923 31940718.0 19851.0 nc|ENSG00000114127|Q8IZH2-3|XRN1;;nc|ENSG00000114127|Q8IZH2|XRN1;;ENSG00000114127|ENST00000392981|XRN1 10.201093673706056 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19862 95.861 216.0 460500.0 25 0 70586.0 + 18294 KVLDFEHFL 9 99 383.2094904872831 1146.606642062049 3 383.2093078494072 MULTI CID FTMS 0 0 0 19851 393525.96875 0.2625727386080727 2 -0.18017578125 11 Unmodified _KVLDFEHFL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 61.60191391372663 0.0251951588191061 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{M(Oxidation (M))|F}EH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 0 + 36.887 0.0 0.0 3.217 3.217 73.264 0.0 0.0 0.0 3.549835755945516 7.147642715192504 3.549835755945516 3.549835755945516 0 0.9489700043360187 0.0 0.5 1.2273473230428982 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{M(Oxidation (M))|F}EH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[{M(Oxidation (M))|F}H]|[RQ]}E{I|L}[WR]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}[WR]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.217;2.9074;2.4314 +;-;- + 115 1 1.57 83877.3 1.0 14027 5833 19851 HBL1_DMSO_200M_050219_1,19862 HBL1_DMSO_200M_050219_1,19862,KVLDFEHFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19863 95.866 302.0 340570.0 25 0 54580.0 + 30192 QVVGLGLVAV 10 116 477.8027121733982 953.5908714135963 2 477.8031188845634 MULTI CID FTMS 0 0 0 19851 374508.9375 1.0 0 0.0 12 Unmodified _QVVGLGLVAV_ ENSG00000136908|ENST00000314392|DPM2;ENST00000495270.1_1_9:130699601-130700099:-|nuORF 58.6788170122104 0.0400518768368984 3 {[VA]|[{I|L}G]}GV{I|L}N{I|L}VAV 10 4 + 71.348 0.0 0.0 7.4821 7.4821 84.701 0.0 0.0 0.0 2.98332479720628 10.012262311882765 2.98332479720628 2.98332479720628 0 0.7742275032520141 1.5228787452803376 0.0 0.7742275032520141 {[VA]|[{I|L}G]}GV{I|L}N{I|L}VAV;{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}GG{I|L}VAV;{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}N{I|L}VAV;{[VA]|[{I|L}G]}VG{I|L}N{I|L}VAV;{[VA]|[{I|L}G]}G{I|L}VN{I|L}VAV;{[VA]|[{I|L}G]}GVAR{I|L}VAV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VGG{I|L}VAV;{[VA]|[{I|L}G]}VAVN{I|L}VAV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VN{I|L}VAV;{[VA]|[{I|L}G]}GV{I|L}QVVAV 7.4821;7.1692;7.1664;7.1664;7.1664;6.9817;6.8535;6.8507;6.8507;6.8105 -;-;-;-;-;-;-;-;-;- 3741 1 1.57 83088.1 1.0 14028 5833 19851 HBL1_DMSO_200M_050219_1,19863 HBL1_DMSO_200M_050219_1,19863,QVVGLGLVAV True True QVVGLGLVAV 95.866206 477.803118884563 1516635.875 19851.0 ENST00000495270.1_1_9:130699601-130700099:-|nuORF;;ENSG00000136908|ENST00000314392|DPM2 3.849565664927165 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19864 95.872 327.0 230290.0 25 0 15399.0 -1 0 91 739.1056322050283 2952.393422953713 4 739.3576537966728 MULTI CID FTMS 0 0 0 19851 343999.1875 0.7648755903428393 2 -0.18017578125 13 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 57.573 0.0 0.0 1.95 0.0 0.0 0.0 2010.8475701496045 2010.8475701496045 34.931605754696946 0.0 0.0 0.0 0 1.5 1.3979400086720375 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.95 - 331 1 1.57 62090.8 1.0 14029 5833 19851 HBL1_DMSO_200M_050219_1,19864 HBL1_DMSO_200M_050219_1,19864, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19865 95.876 199.0 334190.0 25 0 53082.0 + 11727 GLIEIISNA 9 110 465.2691374466749 928.5237219601496 2 465.2687866091728 MULTI CID FTMS 0 0 0 19851 336247.5625 0.5171882711616613 2 -0.18017578125 14 Unmodified _GLIEIISNA_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000480835.1_1_2:96943505-96944085:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 64.23631603340823 0.0237365939569086 3 {[QN]|[E{I|L}]|[KN]}{I|L}G{I|L} 5 6 39.446 0.0 0.0 4.2483 0.0 0.0 0.0 400.1827545131373 400.1827545131373 9.26873501905252 0.0 0.0 0.0 0 0.25 0.8860566476931632 0.5866968715561641 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}G{I|L} 4.2483 - 444 1 1.57 54546.7 1.0 14030 5833 19851 HBL1_DMSO_200M_050219_1,19865 HBL1_DMSO_200M_050219_1,19865,GLIEIISNA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19866 95.881 291.0 478930.0 25 0 67539.0 + 17872 KQLHFLVVL 9 123 366.23437890674177 1095.6813073204253 3 366.2344543337822 MULTI CID FTMS 0 0 0 19851 330072.71875 1.0 0 0.0 15 Unmodified _KQLHFLVVL_ ENST00000404488.7_1_22:50319154-50321136:+|nuORF 32.78568957990786 0.1150597335874693 3 [H{I|L}]QK{M(Oxidation (M))|F}{I|L}VV{I|L} 9 4 + 46.664 0.0 0.0 4.2589 4.2589 81.981 0.0 0.0 0.0 0.0346935159350891 25.98567391607766 0.0346935159350891 9.208187539523747 0 0.6989700043360187 0.0 0.0 1.5114393726401687 [H{I|L}]QK{M(Oxidation (M))|F}{I|L}VV{I|L};[H{I|L}][AG]K{M(Oxidation (M))|F}{I|L}VV{I|L};[H{I|L}]QK{M(Oxidation (M))|F}V{I|L}V{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}QK{I|L}VV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HQK{I|L}VV{I|L};[H{I|L}]Q{M(Oxidation (M))|F}K{I|L}VV{I|L};[H{I|L}]{M(Oxidation (M))|F}QK{I|L}VV{I|L};[H{I|L}][AG]K{M(Oxidation (M))|F}V{I|L}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}QKVV{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}QKVV{I|L} 4.2589;3.4185;3.4126;3.2062;3.2062;2.9988;2.8848;2.5722;2.5611;2.5611 -;-;-;-;-;-;-;-;-;- 533 1 1.57 121390.8 1.0 14031 5833 19851 HBL1_DMSO_200M_050219_1,19866 HBL1_DMSO_200M_050219_1,19866,KQLHFLVVL True True KQLHFLVVL 95.881281 366.234454333782 7649305.0 19851.0 ENST00000404488.7_1_22:50319154-50321136:+|nuORF 5.97065798441569 3.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19867 95.884 155.0 453420.0 25 0 40249.0 + 25371 NAYFLLPKV 9 104 532.8100743753553 1063.6055958175104 2 532.8107787966728 MULTI CID FTMS 0 0 0 19851 324170.875 0.5304480741712232 2 -0.18017578125 16 Unmodified _NAYFLLPKV_ ENSG00000121210|ENST00000409959|TMEM131L;ENST00000462540.1_1_4:154475378-154479541:+|nuORF;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L 36.12702656103203 0.0967173616627612 3 {[QG]|[NA]}Y{M(Oxidation (M))|F}{I|L}{I|L}PKV 9 0 + 71.877 0.0 0.0 6.7579 6.7579 92.216 0.0 0.0 0.0 58.68948444925195 10.367077159036498 10.367077159036498 14.24268947394387 0 0.805462187404089 2.0 0.0 0.0 + + {[QG]|[NA]}Y{M(Oxidation (M))|F}{I|L}{I|L}PKV;{[QG]|[NA]}Y{M(Oxidation (M))|F}{I|L}{I|L}V[KP] 6.7579;5.4188 +;- + 181 + 1 1.57 63074.6 1.0 14032 5833 19851 HBL1_DMSO_200M_050219_1,19867 HBL1_DMSO_200M_050219_1,19867,NAYFLLPKV True True NAYFLLPKV 95.884366 532.810778796673 9634702.0 19851.0 nc|ENSG00000121210|A2VDJ0|TMEM131L;;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;;ENSG00000121210|ENST00000409959|TMEM131L;;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;;ENST00000462540.1_1_4:154475378-154479541:+|nuORF 7.602305889129639 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19868 95.888 166.0 398910.0 25 0 68955.0 + 13663 HPWVLPVV 8 69 473.7797055753987 945.5448582175974 2 473.7794067263603 MULTI CID FTMS 0 0 0 19851 318004.59375 1.0 0 0.0 17 Unmodified _HPWVLPVV_ ENSG00000120053|ENST00000370508|GOT1;ENST00000471741.1_1_10:101180368-101190322:-|nuORF;nc|ENSG00000120053|P17174-2|GOT1 32.45364647766026 0.3613649037604678 3 [VP]WH{I|L} 5 5 39.437 0.0 0.0 4.1708 0.0 0.0 0.0 310.1776061352837 310.1776061352837 25.28028723600244 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [VP]WH{I|L} 4.1708 - 122 1 1.57 55171.5 1.0 14033 5833 19851 HBL1_DMSO_200M_050219_1,19868 HBL1_DMSO_200M_050219_1,19868,HPWVLPVV False True HPWVLPVV 95.887612 473.77940672636 4393582.0 19851.0 nc|ENSG00000120053|P17174-2|GOT1;;ENSG00000120053|ENST00000370508|GOT1;;ENST00000471741.1_1_10:101180368-101190322:-|nuORF 6.4541958173116045 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19869 95.899 665.0 481070.0 25 0 27839.0 + 3034 AVLDNFVYV 9 130 1039.5458247393974 1038.5385482727977 1 1039.547412097454 MULTI CID FTMS 0 0 0 19851 294905.5625 1.0 0 0.0 18 Unmodified _AVLDNFVYV_ ENSG00000167487|ENST00000300976|KLHL26 88.90359156742426 0.0153595091083554 3 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}ND{I|L}VYV 9 4 + 90.831 0.0 0.0 8.746 8.746 92.369 0.0 0.0 0.0 9.208187539523747 14.973024840566469 9.208187539523747 7.742275032520141 0 0.4247425010840047 1.6989700043360187 0.8737125054200235 2.305462187404089 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}ND{I|L}VYV;{[VA]|[{I|L}G]}{M(Oxidation (M))|F}ND{I|L}YVV;{[VA]|[{I|L}G]}{M(Oxidation (M))|F}NEVVYV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VAD{I|L}VYV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VDA{I|L}VYV;{[VA]|[{I|L}G]}{I|L}DN{M(Oxidation (M))|F}VYV;{[VA]|[{I|L}G]}{M(Oxidation (M))|F}NDV{I|L}YV;{[VA]|[{I|L}G]}{M(Oxidation (M))|F}NVEVYV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DVA{I|L}VYV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VD{I|L}AVYV 8.746;8.0005;7.9924;7.8594;7.7869;7.7542;7.7365;7.5915;7.497;7.3288 -;-;-;-;-;+;-;-;-;- + 13966 1 1.57 198820.0 1.0 14034 5833 19851 HBL1_DMSO_200M_050219_1,19869 HBL1_DMSO_200M_050219_1,19869,AVLDNFVYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19870 95.904 175.0 297680.0 25 0 23725.0 + + -1 FFPFDTRQM 9 86 594.7810217359291 1187.5474905386582 2 594.7822753787041 MULTI CID FTMS 0 0 0 19851 274950.6875 0.6103045515035087 6 -0.6443710327148438 19 Carbamidomethyl (C) _PFFFPC(Carbamidomethyl (C))FVQ_ nc|ENSG00000153827|Q14669-2|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12 16.942295170755138 0.3780752226737986 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{M(Oxidation (M))|F}D[MT]GN{I|L} 10 -1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} + + 26.085 1.7339 0.58949 2.1965 2.1965 49.012 0.0 0.0 0.0 0.0 12.04349036042549 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.3054621874040891 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{M(Oxidation (M))|F}D[MT]GN{I|L} 2.1965 - 138 + 1 1.57 43248.6 1.0 14035 5833 19851 HBL1_DMSO_200M_050219_1,19870 HBL1_DMSO_200M_050219_1,19870,PFFFPCFVQ False False FFPFDTRQM 95.903831 594.782275378704 3232299.0 19851.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12 4.723791281382243 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19871 95.91 323.0 267350.0 25 0 13046.0 + -1 LIGCCFYFLI 10 147 624.8092390603057 1247.6039251874113 2 625.3112670779228 MULTI CID FTMS 0 0 0 19851 272710.71875 1.0 0 0.0 20 Carbamidomethyl (C) _LIGC(Carbamidomethyl (C))CFYFLI_ REV__ENST00000606080.1_1_6:116381649-116381904:-|nuORF 18.13498045792455 0.5432546531930572 3 [{I|L}A]{I|L}DEGA{I|L} 8 -1 47.418 0.0 0.0 3.8007 0.0 0.0 0.0 462.16340540771256 462.16340540771256 15.427662627940798 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.535666875892183 0.0 [{I|L}A]{I|L}DEGA{I|L} 3.8007 - 3641 1 1.57 76531.4 1.0 14036 5833 19851 HBL1_DMSO_200M_050219_1,19871 HBL1_DMSO_200M_050219_1,19871,LIGCCFYFLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19873 95.914 88.0 1466100.0 25 0 102090.0 -1 0 85 641.3183309216022 2561.2442178200085 4 641.5695068240166 MULTI CID FTMS 0 0 0 19872 797663.0625 0.4080876999436787 1 -0.1099624633789062 1 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 68.365 0.0 0.0 2.6692 0.0 0.0 0.0 1619.6976277465617 1619.6976277465617 29.92361847708061 0.0 0.0 0.0 0 1.5 1.3010299956639813 0.6989700043360187 0.0 [H{I|L}]VEA{I|L}Y{I|L} 2.6692 - 792 1 1.57 103633.9 1.0 14037 5834 19872 HBL1_DMSO_200M_050219_1,19873 HBL1_DMSO_200M_050219_1,19873, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19874 95.917 106.0 707820.0 25 0 93896.0 + 5591 DNADLILIEL 10 112 564.8112442444148 1127.6079355556294 2 564.8112670779228 MULTI CID FTMS 0 0 0 19872 439055.65625 0.0720531918594809 2 -0.2248306274414062 2 Unmodified _DNADLILIEL_ REV__ENSG00000075275|ENST00000674500|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6-2|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6|CELSR1 46.0223103267499 0.103496714999793 3 {[QN]|[E{I|L}]|[KN]}G[DN]{I|L}{I|L} 7 -1 37.854 0.0 0.0 3.357 0.0 0.0 0.0 370.1973919219817 370.1973919219817 6.427039248959531 0.0 0.0 0.0 0 0.0 0.958607314841775 1.1964215256439 0.809894379144197 {[QN]|[E{I|L}]|[KN]}G[DN]{I|L}{I|L} 3.357 - 340 1 1.57 62898.8 1.0 14038 5834 19872 HBL1_DMSO_200M_050219_1,19874 HBL1_DMSO_200M_050219_1,19874,DNADLILIEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19875 95.919 93.0 907890.0 25 0 64545.0 -1 0 96 771.3662180162245 3081.4357661984977 4 771.6177856326103 MULTI CID FTMS 0 0 0 19872 713978.3125 0.5448772305277504 1 -0.1099624633789062 3 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 56.592 0.0 0.0 1.8365 0.0 0.0 0.0 2139.888581188838 2139.888581188838 37.663800089887545 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.8365 - 181 1 1.57 63240.9 1.0 14039 5834 19872 HBL1_DMSO_200M_050219_1,19875 HBL1_DMSO_200M_050219_1,19875, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19876 95.921 112.0 695700.0 25 0 91800.0 24645 MLQEPLLVV 9 104 529.2996534907433 1056.5847540482864 2 529.2986938357353 MULTI CID FTMS 0 0 0 19872 417110.84375 0.3022620923206971 3 -0.33245849609375 4 Oxidation (M) _M(Oxidation (M))LQEPLLVV_ ENSG00000163902|ENST00000296255|RPN1 68.08070601005525 0.0218408846571049 3 [EP]YPQ{I|L}{I|L}VV 9 5 + 61.071 0.0 0.0 5.7801 5.7801 75.301 0.0 0.0 0.0 6.777807052660805 8.824995917031941 6.777807052660805 0.2422750325201406 0 1.1435078169319297 0.8538719643217619 1.5 0.8807196863200843 [EP]YPQ{I|L}{I|L}VV;[EP]{I|L}{M(Oxidation (M))|F}Q{I|L}{I|L}VV;[EP]{I|L}{I|L}Q{M(Oxidation (M))|F}{I|L}VV;[EP]{I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}VV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}PQ{I|L}{I|L}VV;{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}Q{I|L}{I|L}VV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EPQ{I|L}{I|L}VV;[EP]YP{I|L}Q{I|L}VV;[EP]{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L}VV;[EP]Y{I|L}PQ{I|L}VV 5.7801;5.7571;5.1747;5.1747;5.1386;5.1157;5.0178;4.6507;4.6278;4.6278 -;-;-;-;-;-;-;-;-;- 1049 1 1.57 73140.6 1.0 14040 5834 19872 HBL1_DMSO_200M_050219_1,19876 HBL1_DMSO_200M_050219_1,19876,MLQEPLLVV True False QPYPEILVV 95.920952 529.298693835735 33544242.0 19872.0 ENSG00000104312|ENST00000220751|RIPK2;;nc|ENSG00000104312|O43353-2|RIPK2;;ENST00000522965.1_1_8:90770176-90802641:+|nuORF 4.835890293121338 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19877 95.927 332.0 254180.0 25 0 80149.0 -1 0 98 604.0308601266745 1809.0707509802232 3 604.0309936404228 MULTI CID FTMS 0 0 0 19872 320232.0625 0.7118260674220679 -2 0.1799087524414062 5 3 SWEQ{M(Oxidation (M))|F}Q[HV] 8 -1 34.646 0.0 0.0 1.9151 0.0 0.0 749.5935051890643 0.0 749.5935051890643 0.0 23.226338985623745 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3054621874040891 SWEQ{M(Oxidation (M))|F}Q[HV] 1.9151 - 203 + 1 1.57 77608.9 1.0 14041 5834 19872 HBL1_DMSO_200M_050219_1,19877 HBL1_DMSO_200M_050219_1,19877, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19878 95.929 106.0 842590.0 25 0 62298.0 -1 0 93 854.7556511726688 2561.245124118206 3 855.0900146365166 MULTI CID FTMS 0 0 0 19872 283528.5 0.3730869189514778 1 -0.1099624633789062 6 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 64.447 0.0 0.0 2.5162 0.0 0.0 0.0 1520.6430482727562 1520.6430482727562 37.01213124741251 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.5162 - 138 1 1.57 65311.0 1.0 14042 5834 19872 HBL1_DMSO_200M_050219_1,19878 HBL1_DMSO_200M_050219_1,19878, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19879 95.933 203.0 348210.0 25 0 54166.0 + 27137 PFPFLSSWR 9 110 568.7958452180364 1135.5771375028728 2 568.7969238162041 MULTI CID FTMS 0 0 0 19872 247311.84375 0.4527317404578266 1 -0.1099624633789062 7 Unmodified _PFPFLSSWR_ REV__ENST00000462967.5_1_20:2641101-2641311:-|nuORF;REV__nc|ENSG00000101365|O43837-3|IDH3B 15.847184025352805 0.4077185912009129 3 M{M(Oxidation (M))|F}KQM 5 -1 29.38 0.0 0.0 2.5873 0.0 0.0 262.1876101060746 205.06202112369377 467.2496312297684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 M{M(Oxidation (M))|F}KQM 2.5873 - 199 + 1 1.57 56498.1 1.0 14043 5834 19872 HBL1_DMSO_200M_050219_1,19879 HBL1_DMSO_200M_050219_1,19879,PFPFLSSWR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19880 95.939 317.0 496180.0 25 0 43815.0 + 10737 FYGRFFGL 8 124 503.7605334928399 1005.5065140524798 2 503.7610961794853 MULTI CID FTMS 0 0 0 19872 194682.453125 1.0 0 0.0 8 Unmodified _FYGRFFGL_ ENST00000377270.7_1_9:71687674-71687986:+|nuORF 28.17323086031832 0.4514957916281387 3 {M(Oxidation (M))|F}YA{M(Oxidation (M))|F}AA{M(Oxidation (M))|F}G{I|L} 9 4 + 42.577 0.0 0.0 4.2344 4.2344 76.289 0.0 0.0 0.0 6.48325926497116 3.965139535033167 3.965139535033167 3.965139535033167 0 1.1307196863200843 0.0 0.0 0.0 {M(Oxidation (M))|F}YA{M(Oxidation (M))|F}AA{M(Oxidation (M))|F}G{I|L};{M(Oxidation (M))|F}YA{M(Oxidation (M))|F}RR{M(Oxidation (M))|F};[HA]{I|L}R{M(Oxidation (M))|F}AYE;{M(Oxidation (M))|F}YA{M(Oxidation (M))|F}AA{M(Oxidation (M))|F}AV;{[VA]|[{I|L}G]}G[H{I|L}]{M(Oxidation (M))|F}AYE;{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}AAA{M(Oxidation (M))|F}G{I|L};{M(Oxidation (M))|F}YA[{I|L}P][EP]G{I|L};{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}{[NV]|[RG]}{M(Oxidation (M))|F}G{I|L};{NN|[MP]|[D{I|L}]|[EV]}[VS][{I|L}P]AYE;{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}ARR{M(Oxidation (M))|F} 4.2344;3.84;3.5896;3.4605;3.3934;3.3121;3.2393;3.1424;3.0133;2.9178 -;-;-;-;-;-;-;-;-;- 599 + 1 1.57 121060.8 1.0 14044 5834 19872 HBL1_DMSO_200M_050219_1,19880 HBL1_DMSO_200M_050219_1,19880,FYGRFFGL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19881 95.943 219.0 345020.0 25 0 22495.0 -1 0 92 1080.008419602731 2158.002286272262 2 1080.508349597454 MULTI CID FTMS 0 0 0 19872 182369.796875 0.440260206033472 3 -0.33245849609375 9 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CA]|SS}{I|L}ADAMS{I|L}D{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VY{I|L}A[KG] 20 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CA]|SS}{I|L} + + 71.846 -5.9074 -1.0855 3.3293 3.3293 50.843 0.0 0.0 0.0 0.0 58.57509072285026 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CA]|SS}{I|L}ADAMS{I|L}D{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VY{I|L}A[KG] 3.3293 - 426 + 1 1.57 54934.9 1.0 14045 5834 19872 HBL1_DMSO_200M_050219_1,19881 HBL1_DMSO_200M_050219_1,19881, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19882 95.949 335.0 352960.0 25 0 34773.0 + 1722 ALPQFFNNV 9 154 525.2738676791072 1048.5331824250145 2 525.2747070193291 MULTI CID FTMS 0 0 0 19872 164957.875 0.6037171942306496 -2 0.1799087524414062 10 Unmodified _ALPQFFNNV_ ENSG00000169919|ENST00000304895|GUSB;nc|ENSG00000169919|P08236-2|GUSB;nc|ENSG00000169919|P08236-3|GUSB 21.74664581756881 0.2544899275067181 3 [{I|L}A]GM{M(Oxidation (M))|F}ND 7 5 48.091 0.0 0.0 4.5865 0.0 0.0 0.0 297.1930590709034 297.1930590709034 29.011007396375128 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.7302046884880937 [{I|L}A]GM{M(Oxidation (M))|F}ND 4.5865 - 821 1 1.57 102574.5 1.0 14046 5834 19872 HBL1_DMSO_200M_050219_1,19882 HBL1_DMSO_200M_050219_1,19882,ALPQFFNNV False True ALPQFFNNV 95.949152 525.274707019329 3365682.5 19872.0 ENSG00000169919|ENST00000304895|GUSB;;nc|ENSG00000169919|P08236-2|GUSB;;nc|ENSG00000169919|P08236-3|GUSB 2.3524674102663994 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19883 95.963 800.0 211530.0 25 0 15685.0 + + -1 LPRLTPPVLEEM 12 122 697.8888132108211 1393.7630734884422 2 697.8894531130791 MULTI CID FTMS 0 0 0 19872 144724.140625 0.3668166828444936 1 -0.1099624633789062 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LKLRLPHCLEM_ nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;ENSG00000156261|ENST00000286788|CCT8 15.248480904072842 0.7179608125786238 3 {[QN]|[E{I|L}]|[KN]}[{I|L}P]K{[HG]|PP}V{I|L}EEM 12 -1 + 71.23 0.0 0.0 5.1106 5.1106 83.239 0.0 0.0 0.0 14.3270211493125 16.611814434466197 14.3270211493125 8.26606256887672 0 1.8684151806525389 1.2218487496163564 0.3494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}[{I|L}P]K{[HG]|PP}V{I|L}EEM;{[QN]|[E{I|L}]|[KN]}[{I|L}P]K{[HG]|PP}VE{I|L}EM;[{I|L}P]{[QN]|[E{I|L}]|[KN]}K{[HG]|PP}V{I|L}EEM;[{I|L}P]R[{I|L}T]{[HG]|PP}V{I|L}EEM;{[QN]|[E{I|L}]|[KN]}[VP]P[KP]{I|L}{I|L}EEM;[{I|L}P]{[QN]|[E{I|L}]|[KN]}K{[HG]|PP}VE{I|L}EM;[VP]P{I|L}T[RP]{I|L}{I|L}EEM;[VP]P{I|L}R[TP]{I|L}{I|L}EEM;[VP]{I|L}PR[TP]{I|L}{I|L}EEM;[VP]{I|L}PT[RP]{I|L}{I|L}EEM 5.1106;4.5176;4.0827;3.9083;3.854;3.4896;3.4882;3.4882;3.4401;3.4401 -;-;-;-;-;-;-;-;-;- 996 1 1.57 125259.6 0.6800000071525574 14047 5834 19872 HBL1_DMSO_200M_050219_1,19883 HBL1_DMSO_200M_050219_1,19883,LKLRLPHCLEM False False LPRLTPPVLEEM 95.962985 697.889453113079 20787052.5 19872.0 nc|ENSG00000156261|P50990-2|CCT8;;nc|ENSG00000156261|P50990-3|CCT8;;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;;ENSG00000156261|ENST00000286788|CCT8 8.569976488749186 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19884 95.977 800.0 207720.0 25 0 13293.0 + 39517 VATVASLLV 9 149 872.5452727515736 871.5379962849736 1 872.5446655154228 MULTI CID FTMS 0 0 0 19872 126481.4296875 0.1828134032197408 3 -0.33245849609375 12 Unmodified _VATVASLLV_ ENSG00000283703|ENST00000686984|VSIG10L2;nc|ENSG00000283703|P0DP72|VSIG10L2 50.855029805455786 0.0384952370514206 3 {I|L}{I|L}TG[SG]{I|L}{I|L}V 9 4 + 47.429 0.0 0.0 5.442 5.442 78.052 0.0 0.0 0.0 2.5540530697521504 13.937035644736008 2.5540530697521504 2.5540530697521504 0 0.2742275032520141 0.6989700043360187 1.7396518287104437 0.0 {I|L}{I|L}TG[SG]{I|L}{I|L}V;[{I|L}T]{I|L}G[SG]{I|L}{I|L}V;{I|L}{I|L}TGV{[SA]|[TG]}{I|L}V;[{I|L}T]G{I|L}[SG]{I|L}{I|L}V;[{I|L}T]{I|L}GV{[SA]|[TG]}{I|L}V;[{I|L}T]G{I|L}V{[SA]|[TG]}{I|L}V;[{I|L}T][NS]{I|L}{I|L}{I|L}V;{I|L}{I|L}TG{I|L}[SG]{I|L}V;{I|L}{I|L}T[NS]{I|L}{I|L}V;[{I|L}T]{I|L}G{I|L}[SG]{I|L}V 5.442;5.149;5.0981;5.0903;4.8051;4.7464;4.6846;4.6437;4.4237;4.3506 -;-;-;-;-;-;-;-;-;- 2559 1 1.57 107665.6 0.8100000023841858 14048 5834 19872 HBL1_DMSO_200M_050219_1,19884 HBL1_DMSO_200M_050219_1,19884,VATVASLLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19885 95.991 800.0 402940.0 25 0 48369.0 + 10207 FQIIQSIRMGM 11 152 662.3486613510391 1322.6827697688782 2 662.3495361208916 MULTI CID FTMS 0 0 0 19872 134130.71875 0.2197375834872506 -2 0.1799087524414062 13 Unmodified _FQIIQSIRMGM_ ENSG00000120742|ENST00000239944|SERP1;ENSG00000151778|ENST00000379179|SERP2 159.1008501968603 3.405305233029103e-07 3 {M(Oxidation (M))|F}Q{I|L}{I|L}QS{I|L}RMGM 11 0 + 109.87 0.0 0.0 8.3067 8.3067 82.624 0.0 0.0 0.0 0.5957291758889056 0.5957291758889056 0.5957291758889056 0.5957291758889056 0 2.25 0.0 1.5114393726401687 1.947621246364342 + + {M(Oxidation (M))|F}Q{I|L}{I|L}QS{I|L}RMGM;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SQ{I|L}{I|L}QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}MSSQ{I|L}{I|L}QE;{M(Oxidation (M))|F}Q{I|L}{I|L}QS{I|L}RCC{I|L};{M(Oxidation (M))|F}[AG]{I|L}{I|L}QS{I|L}RMGM;{M(Oxidation (M))|F}Q{I|L}{I|L}[AG]S{I|L}RMGM;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}S[AG]{I|L}{I|L}QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SQ{I|L}{I|L}[AG]E;[Q{I|L}]{I|L}[HD]SQ{I|L}{I|L}QE;{I|L}{I|L}Q[HD]SQ{I|L}{I|L}QE 8.3067;8.2617;7.9978;7.6471;7.6165;7.6165;7.5715;7.5715;7.5647;7.5229 +;-;-;-;-;-;-;-;-;- + 4765 + 1 1.57 231468.9 0.6299999952316284 14049 5834 19872 HBL1_DMSO_200M_050219_1,19885 HBL1_DMSO_200M_050219_1,19885,FQIIQSIRMGM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19886 96.006 800.0 281670.0 25 0 25976.0 + 12775 GVPQALFGV 9 146 887.498606394404 886.4913299278039 1 887.5014526247978 MULTI CID FTMS 0 0 0 19872 81638.7421875 0.0034294055891392 22 -2.610511779785156 14 Unmodified _GVPQALFGV_ ENSG00000010292|ENST00000315579|NCAPD2 50.855029805455786 0.0384952370514206 3 [QP]A{I|L}GV{M(Oxidation (M))|F}GV 9 4 + 57.387 0.0 0.0 6.4735 6.4735 83.093 0.0 0.0 0.0 7.147642715192504 37.92841813161999 7.147642715192504 3.520599913279625 0 0.3807196863200844 0.0 0.0 0.6747425010840047 [QP]A{I|L}GV{M(Oxidation (M))|F}GV;[QP]AGV{I|L}{M(Oxidation (M))|F}GV;[QP]A{I|L}{M(Oxidation (M))|F}GVGV;[QP]A{I|L}G{M(Oxidation (M))|F}VGV;[QP]AG{I|L}V{M(Oxidation (M))|F}GV;[AG]PA{I|L}GV{M(Oxidation (M))|F}GV;[QP]QV{I|L}{M(Oxidation (M))|F}GV;[AG]PQV{I|L}{M(Oxidation (M))|F}GV;[QP]Q{I|L}V{M(Oxidation (M))|F}GV;[AG]PA{I|L}{M(Oxidation (M))|F}GVGV 6.4735;6.0764;5.8456;5.6469;5.5958;5.3728;5.3456;5;4.865;4.8024 -;-;-;-;-;-;-;-;-;- 2336 1 1.57 143270.5 0.6899999976158142 14050 5834 19872 HBL1_DMSO_200M_050219_1,19886 HBL1_DMSO_200M_050219_1,19886,GVPQALFGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19887 96.02 800.0 253170.0 25 0 23200.0 + 4669 DAYVLPKLYV 10 167 590.8342767634228 1179.6540005936456 2 590.8344604372978 MULTI CID FTMS 0 0 0 19872 96204.9765625 0.0016770768452382 20 -2.3012924194335938 15 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 43.77239144664712 0.1177314611616471 3 {[DA]|[EG]}YV{I|L} 5 5 34.965 0.0 0.0 2.964 0.0 0.0 0.0 615.3472046015773 615.3472046015773 -3.639042580455211 0.0 -3.639042580455211 0.0 0 1.5 1.2218487496163564 0.0 0.0 + {[DA]|[EG]}YV{I|L} 2.964 + + 692 1 1.57 150247.7 0.5 14051 5834 19872 HBL1_DMSO_200M_050219_1,19887 HBL1_DMSO_200M_050219_1,19887,DAYVLPKLYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19889 96.024 7.0 18977000.0 25 0 2009900.0 + 9962 FPGLAIKI 8 89 429.776080166156 857.537607399112 2 429.7762328982353 MULTI CID FTMS 0 0 0 19888 9571389.0 0.8669635895525849 2 -0.2224960327148437 1 Unmodified _FPGLAIKI_ ENSG00000142945|ENST00000372224|KIF2C;ENST00000455186.5_1_1:45205634-45205691:+|nuORF;ENST00000493027.5_1_1:45205556-45221765:+|nuORF 86.12129899796855 0.0650563179454676 3 {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L} 8 0 + 65.695 0.0 0.0 7.6609 7.6609 88.358 0.0 0.0 0.0 13.3994806169435 5.118833609788737 5.118833609788737 5.118833609788737 0 1.5743923658886187 0.0 0.0 0.2887254899964357 + + {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L};{M(Oxidation (M))|F}PG{I|L}A{I|L}{I|L}K;{M(Oxidation (M))|F}P{I|L}GA{I|L}K{I|L};{M(Oxidation (M))|F}P{I|L}Q{I|L}K{I|L};{M(Oxidation (M))|F}P{I|L}GA{I|L}{I|L}K;{M(Oxidation (M))|F}{I|L}PGA{I|L}K{I|L};{M(Oxidation (M))|F}P{I|L}Q{I|L}{I|L}K;{M(Oxidation (M))|F}{I|L}PQ{I|L}K{I|L};{M(Oxidation (M))|F}{I|L}PGA{I|L}{I|L}K;{M(Oxidation (M))|F}{I|L}PQ{I|L}{I|L}K 7.6609;7.064;6.8602;6.3493;6.2632;6.1298;5.7524;5.619;5.5329;5.022 +;-;-;-;-;-;-;-;-;- + 437 + 1 1.576 107451.2 1.0 14052 5835 19888 HBL1_DMSO_200M_050219_1,19889 HBL1_DMSO_200M_050219_1,19889,FPGLAIKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19890 96.025 38.0 3180600.0 25 0 285700.0 -1 TVRALKMH 8 99 486.276888480758 970.539224028316 2 486.2766601443291 MULTI CID FTMS 0 0 0 19888 1589886.375 0.6416616167517131 -1 0.1099624633789062 2 Oxidation (M) _TVRALKM(Oxidation (M))H_ ENSG00000100714|ENST00000652337|MTHFD1;ENSG00000120254|ENST00000367321|MTHFD1L;ENST00000556771.5_1_14:64906939-64911458:+|nuORF 21.74664581756881 0.5868176546531598 3 WP{M(Oxidation (M))|F}{I|L} 4 -1 51.331 0.0 0.0 5.2889 0.0 0.0 0.0 424.232590885958 424.232590885958 22.91423005939789 0.0 0.0 0.0 0 0.6382104921644451 1.3010299956639813 0.0 0.0 WP{M(Oxidation (M))|F}{I|L} 5.2889 - 398 + 1 1.576 95648.1 1.0 14053 5835 19888 HBL1_DMSO_200M_050219_1,19890 HBL1_DMSO_200M_050219_1,19890,TVRALKMH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19891 96.027 31.0 2711000.0 25 0 385460.0 + 12463 GVAESIHLWEV 11 105 620.3221542650405 1238.6297555968808 2 620.3224365115166 MULTI CID FTMS 0 0 0 19888 1814735.875 0.8433832934449472 -1 0.1099624633789062 3 Unmodified _GVAESIHLWEV_ ENSG00000065268|ENST00000585809|WDR18 99.7552728972412 0.000328220943018 3 [H{I|L}]S{I|L}EADEARV 11 9 + 83.995 0.0 0.0 6.7813 6.7813 81.135 0.0 0.0 0.0 4.208187539523749 3.8071968632008577 3.8071968632008577 1.7609125905568137 0 0.3807196863200844 1.2218487496163564 1.4049471895720984 0.0 [H{I|L}]S{I|L}EADEARV;[H{I|L}]SEA{I|L}DEARV;[H{I|L}]{I|L}SEADEARV;[H{I|L}]S{I|L}EADAERV;[H{I|L}]S{I|L}EADEAVR;[VG]A[Y{M(Oxidation (M))|F}]{I|L}DEARV;[H{I|L}]SE{I|L}ADEARV;[H{I|L}]SEA{I|L}DAERV;[H{I|L}]SEA{I|L}DEAVR;[H{I|L}]{I|L}SEADAERV 6.7813;6.6391;6.5383;6.5187;6.4739;6.4416;6.3961;6.3765;6.3318;6.2757 -;-;-;-;-;-;-;-;-;- 14571 1 1.576 67993.0 1.0 14054 5835 19888 HBL1_DMSO_200M_050219_1,19891 HBL1_DMSO_200M_050219_1,19891,GVAESIHLWEV True True GVAESIHLWEV 96.026599 620.322436511517 49161792.0 19888.0 ENSG00000065268|ENST00000585809|WDR18 8.37209177017212 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19892 96.029 84.0 1481900.0 25 0 292320.0 + 12698 GVLPQLSMV 9 89 943.5276339808364 942.5203575142364 1 943.5281860232352 MULTI CID FTMS 0 0 0 19888 679629.4375 0.1489282304834074 3 -0.404022216796875 4 Unmodified _GVLPQLSMV_ ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF 92.4914307365334 0.0139747738690111 3 [QP]{I|L}GV{I|L}SMV 9 4 + 77.863 0.0 0.0 8.2611 8.2611 92.483 0.0 0.0 0.0 17.486512420283233 21.047867366774952 17.486512420283233 8.907402517380433 0 0.5941876774005248 1.3979400086720375 0.6307196863200843 0.8481362441963329 [QP]{I|L}GV{I|L}SMV;[QP]{I|L}SMVG{I|L}V;[QP]{I|L}GVS{I|L}MV;[QP]{I|L}{I|L}KDMV;[QP]{I|L}{I|L}[VG]SMV;[QP]{I|L}S[VG]{I|L}MV;[QP]{I|L}GVSM{I|L}V;[QP]{I|L}S{I|L}[VG]MV;[QP]{I|L}{I|L}DKMV;[QP]{I|L}MSVG{I|L}V 8.2611;7.3161;7.1744;6.5114;6.38;6.2035;6.1433;6.1195;6.0595;6.0155 -;-;-;-;-;-;-;-;-;- 1446 1 1.576 84515.1 1.0 14055 5835 19888 HBL1_DMSO_200M_050219_1,19892 HBL1_DMSO_200M_050219_1,19892,GVLPQLSMV True True GVLPQLSMV 96.028503 943.528186023235 48637005.25 19888.0 ENST00000477668.5_1_3:127323572-127337961:+|nuORF;;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2 7.18526045481364 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19893 96.033 208.0 996180.0 25 0 71067.0 + 2901 AVFPDDMPTL 10 101 1105.5237221458433 1104.5164456792434 1 1107.531420886517 MULTI CID FTMS 0 0 0 19888 531456.3125 0.6312488210436936 2 -0.2224960327148437 5 Unmodified _AVFPDDMPTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 41.8396318013385 0.1381409678234242 3 [TP]{I|L} 3 7 23.557 0.0 0.0 2.1327 0.0 0.0 0.0 790.3078343561391 790.3078343561391 2.6362119602853262 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + [TP]{I|L} 2.1327 + + 4073 1 1.576 128583.0 1.0 14056 5835 19888 HBL1_DMSO_200M_050219_1,19893 HBL1_DMSO_200M_050219_1,19893,AVFPDDMPTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19894 96.035 125.0 988240.0 25 0 110150.0 + 11513 GIMDRFLQV 9 121 539.7894427191356 1077.5643325050712 2 539.7897216677666 MULTI CID FTMS 0 0 0 19888 476429.84375 0.233610932223424 2 -0.2224960327148437 6 Unmodified _GIMDRFLQV_ ENSG00000157456|ENST00000288207|CCNB2 55.50274090549119 0.0285720310785888 3 {[VA]|[{I|L}G]}GMR{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}V 10 4 + 45.073 0.0 0.0 4.1829 4.1829 76.24 0.0 0.0 0.0 2.723703006718594 17.62578788640525 2.723703006718594 3.9878032203523617 0 1.1237125054200234 2.0 0.0 0.5242275032520141 {[VA]|[{I|L}G]}GMR{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}V;{[VA]|[{I|L}G]}A{[WS]|[C(Carbamidomethyl (C)){I|L}]}W{M(Oxidation (M))|F}{I|L}V;{[VA]|[{I|L}G]}A[HD]{I|L}{I|L}G[WP];{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}QV;{[VA]|[{I|L}G]}GMY[TP]A[R{I|L}];{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}AG{I|L}V;{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{M(Oxidation (M))|F}W{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}MY[TP]{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}Q{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{I|L}]W{I|L}QV 4.1829;3.8128;3.6288;3.1264;2.6807;2.6654;2.5894;2.5451;2.4979;2.399 -;-;-;-;-;-;-;-;-;- 2070 1 1.576 98850.1 1.0 14057 5835 19888 HBL1_DMSO_200M_050219_1,19894 HBL1_DMSO_200M_050219_1,19894,GIMDRFLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19895 96.037 94.0 1058500.0 25 0 86109.0 + 1926 AMIELVERL 9 93 537.3051342646982 1072.5957155961962 2 537.3054077029228 MULTI CID FTMS 0 0 0 19888 484580.25 0.1677905966954362 3 -0.404022216796875 7 Unmodified _AMIELVERL_ ENSG00000166326|ENST00000299413|TRIM44 60.07390631473393 0.0260411565414776 3 {[DS]|[MA]|[CV]|TT}{I|L}E{I|L}VER{I|L} 9 0 + 87.304 0.0 0.0 8.1395 8.1395 87.876 0.0 0.0 0.0 43.20107520596089 13.58780533059658 13.58780533059658 4.005149978319906 0 1.3494850021680094 2.0 0.8494850021680094 0.3252574989159953 + + {[DS]|[MA]|[CV]|TT}{I|L}E{I|L}VER{I|L};{[DS]|[MA]|[CV]|TT}{I|L}{I|L}EVER{I|L};{[DS]|[MA]|[CV]|TT}{I|L}E{I|L}{I|L}DR{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AE{I|L}VER{I|L};{[DS]|[MA]|[CV]|TT}{I|L}{I|L}E{I|L}DR{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{I|L}EVER{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AE{I|L}{I|L}DR{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{I|L}E{I|L}DR{I|L};[{I|L}A]ME{I|L}VER{I|L};[{I|L}A]M{I|L}EVER{I|L} 8.1395;7.7661;7.2749;7.2048;6.9015;6.8314;6.3402;5.9668;5.924;5.5506 +;-;-;-;-;-;-;-;-;- + 633 + 1 1.576 83736.3 1.0 14058 5835 19888 HBL1_DMSO_200M_050219_1,19895 HBL1_DMSO_200M_050219_1,19895,AMIELVERL True True AMIELVERL 96.037138 537.305407702923 45457140.0 19888.0 ENSG00000166326|ENST00000299413|TRIM44 4.724286874135335 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19896 96.04 141.0 805390.0 25 0 139640.0 + 31873 RTLDFDPLL 9 99 545.3003992159358 1088.5862454986716 2 545.3010742068291 MULTI CID FTMS 0 0 0 19888 442195.4375 0.4847990973785276 2 -0.2224960327148437 8 Unmodified _RTLDFDPLL_ ENSG00000135334|ENST00000257787|AKIRIN2 40.23920728925047 0.0741434193262949 3 [{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}DP{I|L}{I|L} 9 4 + 78.236 0.0 0.0 7.1869 7.1869 88.844 0.0 0.0 0.0 6.935457430431328 16.478174818886373 6.935457430431328 6.935457430431328 0 0.8807196863200843 2.0 0.3807196863200844 0.6747425010840047 [{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}DP{I|L}{I|L};[{I|L}T]RD{M(Oxidation (M))|F}DP{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}D{M(Oxidation (M))|F}DP{I|L}{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}{M(Oxidation (M))|F}DP{I|L}{I|L};[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}PD{I|L}{I|L};[{I|L}T]RD{M(Oxidation (M))|F}PD{I|L}{I|L};[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}PVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}G[KG]{M(Oxidation (M))|F}DP{I|L}{I|L};[{I|L}T]RD{M(Oxidation (M))|F}PVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}DP{I|L}{I|L} 7.1869;6.5498;5.5624;5.4488;5.4147;5.1678;4.7885;4.7182;4.5415;4.5201 -;-;+;-;-;-;-;-;-;- + 505 1 1.576 101270.1 1.0 14059 5835 19888 HBL1_DMSO_200M_050219_1,19896 HBL1_DMSO_200M_050219_1,19896,RTLDFDPLL True True RTLDFDPLL 96.039978 545.301074206829 14631565.0 19888.0 ENSG00000135334|ENST00000257787|AKIRIN2 5.88546085357666 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19897 96.043 162.0 1047000.0 25 0 49098.0 -1 0 117 791.372936740873 2371.0969808228188 3 791.7083007693291 MULTI CID FTMS 0 0 0 19888 427603.875 0.4444748051802258 -1 0.1099624633789062 9 3 {[HG]|PP}APPGDCNRAGM 13 -1 52.019 0.0 0.0 2.1939 0.0 0.0 0.0 1104.5474557429766 1104.5474557429766 14.56997233705939 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.110924374808178 0.0 {[HG]|PP}APPGDCNRAGM 2.1939 - 42951 1 1.576 120646.8 1.0 14060 5835 19888 HBL1_DMSO_200M_050219_1,19897 HBL1_DMSO_200M_050219_1,19897, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19898 96.047 219.0 686310.0 25 0 78121.0 + 3033 AVLDNFVYV 9 154 520.2768363768887 1038.5391198205773 2 520.2765380740166 MULTI CID FTMS 0 0 0 19888 331370.96875 0.4018275646149161 2 -0.2224960327148437 10 Unmodified _AVLDNFVYV_ ENSG00000167487|ENST00000300976|KLHL26 54.773552608820026 0.0299037012502309 3 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}ND{I|L}VYV 9 4 + 53.915 0.0 0.0 5.1914 5.1914 82.837 0.0 0.0 0.0 7.206225184280804 7.1919646325935815 7.1919646325935815 7.206225184280804 0 0.6677353201839438 1.5228787452803376 0.2742275032520141 1.674742501084005 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}ND{I|L}VYV;[DN]{M(Oxidation (M))|F}VA{I|L}VYV;[DN]{M(Oxidation (M))|F}{I|L}G{I|L}VYV;{NN|[MP]|[D{I|L}]|[EV]}N{M(Oxidation (M))|F}G{I|L}VYV;[{M(Oxidation (M))|F}V]NDA{I|L}VYV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DVA{I|L}VYV;[DN]{I|L}{M(Oxidation (M))|F}G{I|L}VYV;{[VA]|[{I|L}G]}{M(Oxidation (M))|F}NDV{I|L}YV;[{M(Oxidation (M))|F}V]NEG{I|L}VYV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}D{I|L}G{I|L}VYV 5.1914;4.4975;4.3539;4.3375;4.3188;4.2839;4.2336;4.2027;4.1752;4.1403 -;-;-;-;-;-;-;-;-;- 2341 1 1.576 118141.4 1.0 14061 5835 19888 HBL1_DMSO_200M_050219_1,19898 HBL1_DMSO_200M_050219_1,19898,AVLDNFVYV True True AVLDNFVYV 96.04733 520.276538074017 6411836.5 19888.0 ENSG00000167487|ENST00000300976|KLHL26 6.226821581522624 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19899 96.051 177.0 906220.0 25 0 124080.0 + 45794 YYLPKLLSY 9 126 580.3232165290751 1158.6318801249502 2 580.3229858279228 MULTI CID FTMS 0 0 0 19888 320834.4375 0.3571542575470377 -1 0.1099624633789062 11 Unmodified _YYLPKLLSY_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA;nc|ENSG00000115970|Q6YHU6-6|THADA 53.40400417844725 0.0329064971918313 3 YY{I|L}PK{I|L}{I|L}SY 9 0 + 59.966 0.0 0.0 5.1756 5.1756 86.421 0.0 0.0 0.0 32.57126869478952 11.114328194166568 11.114328194166568 11.83967982725121 0 1.1382104921644451 2.0 1.0044321917401078 0.0 + + YY{I|L}PK{I|L}{I|L}SY;[{I|L}P]K{I|L}S{I|L}YYY;[KP]{I|L}{I|L}S{I|L}YYY;[{I|L}P]K{I|L}{I|L}SYYY;{I|L}{I|L}KPS{I|L}YYY;[{I|L}P]K{I|L}SY{I|L}YY;[{I|L}P]KS{I|L}{I|L}YYY;[KP]{I|L}{I|L}{I|L}SYYY;[{I|L}P]K{I|L}{I|L}YYSY;[KP]{I|L}{I|L}SY{I|L}YY 5.1756;4.1537;3.8103;3.5653;3.508;3.3325;3.2906;3.2219;3.0727;2.989 +;-;-;-;-;-;-;-;-;- + 1066 + 1 1.576 122559.2 1.0 14062 5835 19888 HBL1_DMSO_200M_050219_1,19899 HBL1_DMSO_200M_050219_1,19899,YYLPKLLSY True True YYLPKLLSY 96.05077 580.322985827923 8973754.0 19888.0 ENSG00000115970|ENST00000405975|THADA;;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;;nc|ENSG00000115970|Q6YHU6-2|THADA;;nc|ENSG00000115970|Q6YHU6-6|THADA;;nc|ENSG00000115970|Q6YHU6-5|THADA;;nc|ENSG00000115970|Q6YHU6-3|THADA 5.884137948354085 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19900 96.058 417.0 561240.0 25 0 55980.0 + 31566 RQLSEVFIQL 10 129 616.8536704537452 1231.6927879742902 2 616.8535644412041 MULTI CID FTMS 0 0 0 19888 311768.875 0.2988798496056708 2 -0.2224960327148437 12 Unmodified _RQLSEVFIQL_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 57.24910588100465 0.0438022649904578 3 [Q{I|L}]RSEV{M(Oxidation (M))|F}{I|L}Q{I|L} 10 2 + 76.767 0.0 0.0 6.2327 6.2327 85.16 0.0 0.0 0.0 15.698624670292888 55.960696996448576 15.698624670292888 6.03994491105162 0 1.2059771852360797 0.5686362358410126 0.3054621874040891 0.9291746928241126 [Q{I|L}]RSEV{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}]T[RD]V{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}]{M(Oxidation (M))|F}[QP]V{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}]RSEV{M(Oxidation (M))|F}{I|L}[AG]{I|L};[Q{I|L}]T[RD]V{M(Oxidation (M))|F}{I|L}[AG]{I|L};[Q{I|L}]{M(Oxidation (M))|F}[QP]V{M(Oxidation (M))|F}{I|L}[AG]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VAAEV{M(Oxidation (M))|F}{I|L}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}V[RD]V{M(Oxidation (M))|F}{I|L}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[Q{I|L}]EV{M(Oxidation (M))|F}{I|L}Q{I|L};[H{I|L}]V[YT]V{M(Oxidation (M))|F}{I|L}Q{I|L} 6.2327;5.7423;5.4943;5.4886;4.9982;4.7502;4.3283;4.2832;4.1818;4.1533 -;-;-;-;-;-;-;-;-;- 920 1 1.576 172580.3 1.0 14063 5835 19888 HBL1_DMSO_200M_050219_1,19900 HBL1_DMSO_200M_050219_1,19900,RQLSEVFIQL True True RQLSEVFIQL 96.058224 616.853564441204 7164360.5 19888.0 ENST00000591595.5_1_19:11130023-11172489:+|nuORF;;ENSG00000080503|ENST00000349721|SMARCA2;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;nc|ENSG00000080503|P51531-2|SMARCA2;;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;;ENSG00000127616|ENST00000344626|SMARCA4;;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 4.800179799397786 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19901 96.062 166.0 542430.0 25 0 58711.0 + 16566 KDEGLLPTFC 10 138 561.7799432375388 1121.5453335418774 2 561.7800170779228 MULTI CID FTMS 0 0 0 19888 248436.8125 0.4656002458844631 2 -0.2224960327148437 13 Unmodified _KDEGLLPTFC_ REV__ENST00000368547.3_1_10:135176069-135176375:-|nuORF 17.11289562659939 0.5604042439455784 3 [VG]AEDAE{I|L}RY 10 -1 + 38.031 0.0 0.0 3.3909 3.3909 73.581 0.0 0.0 0.0 9.838417964513582 5.099870731286565 5.099870731286565 3.5218251811136128 0 0.1237125054200235 1.5228787452803376 0.4247425010840047 0.3494850021680094 [VG]AEDAE{I|L}RY;[VG]AEWE{I|L}RY;[VG][WE]AE{I|L}RY;[VG]AED{I|L}{[CP]|[EA]}RY;[VG]AEDAE[YR]{I|L};[VG]AED{I|L}YGW{I|L};[VG][Y{M(Oxidation (M))|F}]{I|L}{I|L}[YT]{M(Oxidation (M))|F};[VG]AEWE[YR]{I|L};[VG]AEDA[YV]W{I|L};[VG][PG][MT]E{I|L}RY 3.3909;3.0769;2.5447;2.4129;2.0989;1.8732;1.7883;1.7848;1.5894;1.5666 -;-;-;-;-;-;-;-;-;- 1591 + 1 1.576 77463.3 1.0 14064 5835 19888 HBL1_DMSO_200M_050219_1,19901 HBL1_DMSO_200M_050219_1,19901,KDEGLLPTFC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19902 96.066 238.0 506250.0 25 0 75537.0 + 4921 DGLLRVLTV 9 145 493.3051711892997 984.5957894453994 2 493.3054687380791 MULTI CID FTMS 0 0 0 19888 204297.234375 0.0356365877714612 6 -0.7275848388671875 14 Unmodified _DGLLRVLTV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 53.40400417844725 0.0329064971918313 3 {NN|[MP]|[D{I|L}]|[EV]}G{I|L}RV{I|L}TV 9 2 + 68.07 0.0 0.0 6.9135 6.9135 89.082 0.0 0.0 0.0 8.170693164140133 16.478174818886373 8.170693164140133 8.170693164140133 0 1.6989700043360187 1.3979400086720375 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}G{I|L}RV{I|L}TV;[DG]{I|L}{I|L}RV{I|L}TV;{[VA]|[{I|L}G]}D{I|L}RV{I|L}TV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}GRV{I|L}TV;[{I|L}T][KP]DV{I|L}TV;{[TV]|[{I|L}S]}{I|L}VR{I|L}GEV;{[TV]|[{I|L}S]}{I|L}VRG{I|L}EV;{[TV]|[{I|L}S]}{I|L}VR[TP]TV;{[TV]|[{I|L}S]}{I|L}VR{I|L}ADV;[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}DV{I|L}TV 6.9135;6.0836;5.7339;5.4365;5.3622;5.1971;5.1971;5.0754;5.0702;4.6852 -;+;-;-;-;-;-;-;-;- + 2129 1 1.576 92503.2 1.0 14065 5835 19888 HBL1_DMSO_200M_050219_1,19902 HBL1_DMSO_200M_050219_1,19902,DGLLRVLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19903 96.08 800.0 284290.0 25 0 22046.0 -1 0 142 1186.5547871823137 2371.095021431427 2 1187.556811511517 MULTI CID FTMS 0 0 0 19888 189431.65625 0.7001711556622516 -2 0.18017578125 15 3 [QP][QT]PPPP[C(Carbamidomethyl (C))M]M 11 -1 46.653 0.0 0.0 1.9676 0.0 0.0 0.0 1103.541594716618 1103.541594716618 20.278263074249224 0.0 0.0 0.0 0 0.0 1.0 0.2396518287104437 1.579689690656103 [QP][QT]PPPP[C(Carbamidomethyl (C))M]M 1.9676 - 25321 1 1.576 138378.6 0.9100000262260436 14066 5835 19888 HBL1_DMSO_200M_050219_1,19903 HBL1_DMSO_200M_050219_1,19903, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19904 96.094 800.0 357360.0 25 0 55977.0 + 15415 IPPGSILL 8 125 809.5134060345256 808.5061295679255 1 809.5118896365166 MULTI CID FTMS 0 0 0 19888 171734.953125 0.0082428842017366 31 -3.595283508300781 16 Unmodified _IPPGSILL_ ENSG00000172995|ENST00000684406|ARPP21;nc|ENSG00000172995|Q9UBL0-3|ARPP21;nc|ENSG00000172995|Q9UBL0-4|ARPP21;nc|ENSG00000172995|Q9UBL0|ARPP21 78.44472497914707 0.0986812004920242 3 [{I|L}P]SGP{I|L}{I|L}{I|L} 8 2 + 73.761 0.0 0.0 9.1232 9.1232 86.434 0.0 0.0 0.0 23.979400086720368 62.42076299915079 23.979400086720368 2.3810732319709444 0 0.4247425010840047 1.6989700043360187 1.4802046884880935 0.0 [{I|L}P]SGP{I|L}{I|L}{I|L};[{I|L}P]PGS{I|L}{I|L}{I|L};[{I|L}P]SG{I|L}P{I|L}{I|L};[{I|L}P]PSG{I|L}{I|L}{I|L};[{I|L}P]SPG{I|L}{I|L}{I|L};[{I|L}P]SG{I|L}{I|L}P{I|L};[{I|L}P]PS{I|L}G{I|L}{I|L};[{I|L}P]VASP{I|L}{I|L};[{I|L}P]SP{I|L}G{I|L}{I|L};[{I|L}P]VAS{I|L}P{I|L} 9.1232;8.8287;8.6822;8.3018;7.6039;7.5037;7.4254;7.4057;6.7275;6.2272 -;+;-;-;-;-;-;-;-;- + 995 1 1.576 197247.6 0.7699999809265137 14067 5835 19888 HBL1_DMSO_200M_050219_1,19904 HBL1_DMSO_200M_050219_1,19904,IPPGSILL True True IPPGSILI 96.093665 809.511889636517 0.0 19888.0 nc|ENSG00000048991|Q15032|R3HDM1;;nc|ENSG00000048991|Q15032-4|R3HDM1;;nc|ENSG00000048991|Q15032-3|R3HDM1;;ENSG00000048991|ENST00000683871|R3HDM1 3.0610442956288657 1.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19905 96.103 466.0 357480.0 25 0 101260.0 + -1 AFPGGPLGAL 10 105 899.4988061389713 0 899.4990112185478 PEAK CID FTMS 0 0 0 19888 128908.2734375 0.4758138942858474 4 -0.4641952514648437 17 nc|ENSG00000170291|Q8TE02-3|ELP5;nc|ENSG00000170291|Q8TE02-2|ELP5;nc|ENSG00000170291|Q8TE02-1|ELP5;ENSG00000170291|ENST00000396628|ELP5 3 {I|L}A{M(Oxidation (M))|F}AGPGG 8 -1 25.47 0.0 0.0 1.4174 0.0 0.0 916.4999300007976 207.11419092349848 1123.614120924296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A{M(Oxidation (M))|F}AGPGG 1.4174 - 2604 + 1 1.576 114685.4 1.0 14068 5835 19888 HBL1_DMSO_200M_050219_1,19905 HBL1_DMSO_200M_050219_1,19905, False False AFPGGPLGAL 96.103119 899.499011218548 2675355.75 19888.0 nc|ENSG00000170291|Q8TE02-3|ELP5;;nc|ENSG00000170291|Q8TE02-2|ELP5;;nc|ENSG00000170291|Q8TE02-1|ELP5;;ENSG00000170291|ENST00000396628|ELP5 6.764174143473308 1.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19906 96.117 800.0 68905.0 25 0 11240.0 -1 0 83 1162.195605456829 0 1162.195605456829 PEAK CID FTMS 0 0 0 -1 0 18 3 A 1 -1 5.4846 0.0 0.0 0.23616 0.0 0.0 1099.7754139392457 1148.5655001276002 2248.340914066846 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.23616 - 84 + 1 1.576 39718.1 0.7900000214576721 14069 5835 19888 HBL1_DMSO_200M_050219_1,19906 HBL1_DMSO_200M_050219_1,19906, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19907 96.123 338.0 264160.0 25 0 34800.0 30457 RDVLLVSAI 9 112 493.3051711892997 984.5957894453994 2 494.8084899783134 MULTI CID FTMS 0 0 0 19888 100790.78125 0.2975485608683426 6 -0.7275848388671875 19 Unmodified _RDVLLVSAI_ ENSG00000011347|ENST00000539008|SYT7;nc|ENSG00000011347|O43581-2|SYT7;nc|ENSG00000011347|O43581-4|SYT7;nc|ENSG00000011347|O43581-5|SYT7;nc|ENSG00000011347|O43581-6|SYT7;nc|ENSG00000011347|O43581|SYT7 23.1484247019978 0.2366544122328345 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L}EK{I|L} 8 5 + 40.679 0.0 0.0 4.1316 4.1316 79.519 0.0 0.0 0.0 13.76826259970018 10.533349251486058 10.533349251486058 7.299191406951124 0 0.0 0.0 0.9947026752325154 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L}EK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L}{[TV]|[{I|L}S]}G{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L}{[VA]|[{I|L}G]}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L}{[TV]|[{I|L}S]}AV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L}{[VA]|[{I|L}G]}TV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}R[QA]K{I|L} 4.1316;3.3903;3.2799;3.0425;2.9321;0.97009 -;-;-;-;-;- 407 + 1 1.576 72381.1 1.0 14070 5835 19888 HBL1_DMSO_200M_050219_1,19907 HBL1_DMSO_200M_050219_1,19907,RDVLLVSAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19908 96.135 677.0 216500.0 25 0 31887.0 + -1 AGPLGMGGPL 10 165 456.2359525369829 910.4573521407656 2 456.2359496951103 MULTI CID FTMS 0 0 0 19888 98273.9453125 0.821783090889302 -1 0.1099624633789062 20 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGPLGMGGPL_ REV__ENST00000261318.4_1_12:117175780-117175837:-|nuORF 24.67388899826682 0.4143206957119831 3 MNP{I|L} 4 -1 38.716 0.0 0.0 4.2524 0.0 0.0 437.2267746034594 0.0 437.2267746034594 0.0 27.74735947860492 0.0 0.0 0 1.0 0.0 0.0 0.805462187404089 MNP{I|L} 4.2524 - 305 + 1 1.576 115466.5 1.0 14071 5835 19888 HBL1_DMSO_200M_050219_1,19908 HBL1_DMSO_200M_050219_1,19908,AGPLGMGGPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19910 96.139 1.7 44136000.0 25 0 6727600.0 + 10619 FVNDIFERI 9 66 576.805936717175 1151.59732050115 2 576.8065673708916 MULTI CID FTMS 0 0 0 19909 35164440.0 1.0 0 0.0 1 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 43.9818466556824 0.0535980856389242 3 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}E[R{I|L}] 9 0 + 75.099 0.0 0.0 6.5213 6.5213 89.369 0.0 0.0 0.0 66.68243764792422 9.137342758552691 9.137342758552691 9.208187539523747 0 1.274227503252014 0.0 0.0 0.7742275032520141 + + {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}E[R{I|L}];{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}E[R{I|L}];{M(Oxidation (M))|F}V{I|L}[DN]{M(Oxidation (M))|F}E[R{I|L}];[DN]{I|L}{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]{I|L}VE;[{M(Oxidation (M))|F}V]NE[R{M(Oxidation (M))|F}]{I|L}VE;{[NV]|[RG]}E{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]{I|L}VE;{[NV]|[RG]}{M(Oxidation (M))|F}E[R{M(Oxidation (M))|F}]{I|L}VE;[{M(Oxidation (M))|F}V]GGE[R{M(Oxidation (M))|F}]{I|L}VE;[{M(Oxidation (M))|F}E]{[NV]|[RG]}[R{M(Oxidation (M))|F}]{I|L}VE 6.5213;5.7217;4.7895;3.6176;3.4216;3.3562;3.2676;2.622;2.1667 +;-;-;-;-;-;-;-;- + 308 + 1 1.57 62381.6 1.0 14072 5836 19909 HBL1_DMSO_200M_050219_1,19910 HBL1_DMSO_200M_050219_1,19910,FVNDIFERI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19911 96.14 2.4 28081000.0 25 0 2678000.0 -1 LMFQIRYI 8 72 550.3003780171566 1098.5862031011131 2 550.3012573122978 MULTI CID FTMS 0 0 0 19909 26128310.0 0.7048837657007975 -1 0.1148681640625 2 Oxidation (M) _LM(Oxidation (M))FQIRYI_ nc|ENSG00000163349|Q86Z02-4|HIPK1 24.67388899826682 0.525179942228231 3 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 7 -1 55.054 0.0 0.0 5.0114 0.0 0.0 0.0 128.07219873599846 128.07219873599846 19.620988231865866 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.2742275032520141 0.0 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 5.0114 - 106 + 1 1.57 60918.8 1.0 14073 5836 19909 HBL1_DMSO_200M_050219_1,19911 HBL1_DMSO_200M_050219_1,19911,LMFQIRYI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 19912 96.141 6.6 9691400.0 25 0 993920.0 + 40925 VLSQLLVEL 9 78 507.3157868878592 1012.6170208425184 2 507.3159667849541 MULTI CID FTMS 0 0 0 19909 8479143.0 1.0 0 0.0 3 Unmodified _VLSQLLVEL_ REV__ENSG00000065413|ENST00000282272|ANKRD44;REV__nc|ENSG00000065413|Q8N8A2-2|ANKRD44;REV__nc|ENSG00000065413|Q8N8A2-4|ANKRD44 45.69961567697781 0.0497987121815769 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}AK{I|L}VE{I|L} 9 -1 + 74.403 0.0 0.0 7.3476 7.3476 86.545 0.0 0.0 0.0 8.239087409443187 16.478174818886373 8.239087409443187 4.286662482156345 0 0.3807196863200844 1.3010299956639813 0.7742275032520141 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}AK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}K{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}AKV{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}VAK{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}GK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}V{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}GK{I|L}{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}KV{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}G{I|L}K{I|L}VE{I|L} 7.3476;6.9243;6.753;6.5552;6.5339;6.2367;6.1319;6.1106;5.9606;5.9394 -;-;-;-;-;-;-;-;-;- 1103 1 1.57 54170.7 1.0 14074 5836 19909 HBL1_DMSO_200M_050219_1,19912 HBL1_DMSO_200M_050219_1,19912,VLSQLLVEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19913 96.143 27.0 2610300.0 25 0 408460.0 + 1517 ALIEKLVEL 9 88 514.3234928833207 1026.6324328334413 2 514.3237792849541 MULTI CID FTMS 0 0 0 19909 1933221.875 0.7975460328340441 3 -0.3493270874023437 4 Unmodified _ALIEKLVEL_ ENSG00000014138|ENST00000265465|POLA2;ENST00000532469.1_1_11:65029724-65047127:+|nuORF 78.7280429016045 0.0178249292250809 3 [{I|L}A]{I|L}{M(Oxidation (M))|F}V{I|L}{I|L}EG 9 4 83.114 0.0 0.0 8.0958 0.0 0.0 0.0 68.05146967105702 68.05146967105702 30.9543872825298 0.0 0.0 0.0 0 0.805462187404089 2.0 1.885151878060192 0.0 [{I|L}A]{I|L}{M(Oxidation (M))|F}V{I|L}{I|L}EG 8.0958 - 1591 + 1 1.57 59377.4 1.0 14075 5836 19909 HBL1_DMSO_200M_050219_1,19913 HBL1_DMSO_200M_050219_1,19913,ALIEKLVEL True True ALIEKLVEL 96.142644 514.323779284954 87274512.0 19909.0 ENSG00000014138|ENST00000265465|POLA2;;ENST00000532469.1_1_11:65029724-65047127:+|nuORF 3.945100625356039 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19914 96.144 44.0 1184600.0 25 0 137780.0 + 2899 AVFPDDMPTL 10 70 553.2649900757076 1104.515427218215 2 553.2653076052666 MULTI CID FTMS 0 0 0 19909 1142082.875 0.4591936810367374 3 -0.3493270874023437 5 Unmodified _AVFPDDMPTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 48.345845343767074 0.089859443182303 3 PT{I|L} 3 7 27.065 0.0 0.0 2.4504 0.0 0.0 775.3193637482361 0.0 775.3193637482361 0.0 1.63303128443836 0.0 0.0 0 0.3807196863200844 0.0 0.7059771852360797 0.0 + PT{I|L} 2.4504 + + 90 + 1 1.57 48972.0 1.0 14076 5836 19909 HBL1_DMSO_200M_050219_1,19914 HBL1_DMSO_200M_050219_1,19914,AVFPDDMPTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19915 96.145 46.0 1532700.0 25 0 193670.0 + -1 YQYPVIIHL 9 86 572.3233133078575 1142.6320736825148 2 573.3229247927666 MULTI CID FTMS 0 0 0 19909 1021606.1875 0.835880276994122 3 -0.3493270874023437 6 Carbamidomethyl (C) _VPLIC(Carbamidomethyl (C))IRVAC_ nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1;ENST00000470968.6_1_1:43829589-43833598:-|nuORF 7.910154910731844 0.6900473968920092 3 [YQ]Y 3 -1 23.473 0.0 0.0 2.0543 0.0 0.0 0.0 685.4220266456585 685.4220266456585 2.5386860668588724 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.3807196863200844 [YQ]Y 2.0543 - 118 1 1.57 58351.1 1.0 14077 5836 19909 HBL1_DMSO_200M_050219_1,19915 HBL1_DMSO_200M_050219_1,19915,VPLICIRVAC False False YQYPVIIHL 96.145144 573.322924792767 9428978.0 19909.0 nc|ENSG00000066322|Q9BW60-2|ELOVL1;;ENSG00000066322|ENST00000372458|ELOVL1;;ENST00000470968.6_1_1:43829589-43833598:-|nuORF 5.999495506286621 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19916 96.147 85.0 1107900.0 25 0 148590.0 + 41324 VPLPRLLEV 9 88 518.3315558659916 1034.6485587987831 2 518.3318969607353 MULTI CID FTMS 0 0 0 19909 625489.8125 0.1329713984599089 -2 0.2248306274414062 7 Unmodified _VPIIWVPLV_ nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155 56.04830969593885 0.0282699710924866 3 VP{I|L}V 4 5 51.472 0.0 0.0 4.9749 0.0 0.0 0.0 623.3527315729124 623.3527315729124 26.120097417381768 0.0 0.0 0.0 0 0.7059771852360797 1.3979400086720375 0.0 0.0 + VP{I|L}V 4.9749 + + 112 + 1 1.57 78882.7 1.0 14078 5836 19909 HBL1_DMSO_200M_050219_1,19916 HBL1_DMSO_200M_050219_1,19916,VPIIWVPLV True False VPLPRLLEV 96.147052 518.331896960735 150948324.0 19909.0 nc|ENSG00000113569|O75694-2|NUP155;;ENSG00000113569|ENST00000231498|NUP155 5.309617360432942 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19917 96.149 108.0 867000.0 25 0 83330.0 + 16295 IWPEKVLDI 9 94 556.8206668955752 1111.6267808579505 2 556.8212158083916 MULTI CID FTMS 0 0 0 19909 427507.0625 0.4419437346432743 -1 0.1148681640625 8 Unmodified _IWPEKVLDI_ ENSG00000135108|ENST00000622495|FBXO21 18.1463463914782 0.3454829746528889 3 [W{I|L}][{M(Oxidation (M))|F}V]{I|L}V[DV]G 9 5 46.105 0.0 0.0 4.1475 0.0 0.0 0.0 80.05134760074452 80.05134760074452 34.51090597957851 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.110924374808178 0.0 [W{I|L}][{M(Oxidation (M))|F}V]{I|L}V[DV]G 4.1475 - 199 + 1 1.57 77739.4 1.0 14079 5836 19909 HBL1_DMSO_200M_050219_1,19917 HBL1_DMSO_200M_050219_1,19917,IWPEKVLDI False True IWPEKVLDI 96.149352 556.821215808392 9886685.0 19909.0 ENSG00000135108|ENST00000622495|FBXO21 1.911585847536723 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19918 96.152 102.0 643690.0 25 0 131300.0 + 4042 DALSLKELI 9 92 501.2977572022119 1000.580961471224 2 501.2976257205009 MULTI CID FTMS 0 0 0 19909 416198.03125 0.3995585646592282 3 -0.3493270874023437 9 Unmodified _DALSLKELI_ ENSG00000146909|ENST00000275820|NOM1;ENST00000475176.1_1_7:156752694-156752904:+|nuORF 45.69961567697781 0.0497987121815769 3 {[TV]|[{I|L}S]}G{I|L}S{I|L}V{I|L}{[CP]|[EA]} 10 7 + 43.285 0.0 0.0 4.326 4.326 70.719 0.0 0.0 0.0 0.4014429721864658 1.9986436676957524 0.4014429721864658 0.4014429721864658 0 0.0 1.0457574905606752 0.5994850021680094 0.0 {[TV]|[{I|L}S]}G{I|L}S{I|L}V{I|L}{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}KS{I|L}V{I|L}{[CP]|[EA]};{[TV]|[{I|L}S]}G{I|L}S{I|L}{I|L}V{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}KS{I|L}{I|L}V{[CP]|[EA]};{[SA]|[TG]}V{I|L}S{I|L}V{I|L}{[CP]|[EA]};{[SA]|[TG]}V{I|L}S{I|L}{I|L}V{[CP]|[EA]};{[TV]|[{I|L}S]}KE{I|L}V{I|L}{[CP]|[EA]};{[TV]|[{I|L}S]}G{I|L}S{I|L}{[DA]|[EG]}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}KS{I|L}{[DA]|[EG]}{I|L}{I|L};{[TV]|[{I|L}S]}KE{I|L}{I|L}V{[CP]|[EA]} 4.326;4.2859;4.15;4.1099;4.0814;3.9054;3.8759;3.8188;3.7787;3.7 -;-;-;-;-;-;-;-;-;- 1057 1 1.57 55307.7 1.0 14080 5836 19909 HBL1_DMSO_200M_050219_1,19918 HBL1_DMSO_200M_050219_1,19918,DALSLKELI True True DALSLKELI 96.15154 501.297625720501 10262703.0 19909.0 ENSG00000146909|ENST00000275820|NOM1;;ENST00000475176.1_1_7:156752694-156752904:+|nuORF 3.483295520146688 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19919 96.155 167.0 532650.0 25 0 122660.0 + 2695 ATEKEFFFV 9 109 559.2821922010028 1116.5498314688057 2 559.2823364138603 MULTI CID FTMS 0 0 0 19909 343515.28125 0.4194378912309176 -2 0.2248306274414062 10 Unmodified _ATEKEFFFV_ ENSG00000163568|ENST00000368130|AIM2 32.78568957990786 0.1150597335874693 3 [TA][VS]AE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V 10 3 + 40.631 0.0 0.0 3.6389 3.6389 69.116 0.0 0.0 0.0 3.396868610884958 6.914602132480937 3.396868610884958 0.5174778224378045 0 1.5172203223519531 1.0457574905606752 1.350576203518622 0.0 [TA][VS]AE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[TA]NHKTEA{M(Oxidation (M))|F}V;[TA]NHK[PG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}E]K{M(Oxidation (M))|F}TEA{M(Oxidation (M))|F}V;[TA][DG][{I|L}T]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}KTEA{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TAE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}TEA{M(Oxidation (M))|F}V;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKTEA{M(Oxidation (M))|F}V 3.6389;3.5926;3.4904;3.3347;3.3224;3.2444;3.221;3.1955;3.0691;2.9748 -;-;-;-;-;-;-;-;-;- 946 1 1.57 72852.2 1.0 14081 5836 19909 HBL1_DMSO_200M_050219_1,19919 HBL1_DMSO_200M_050219_1,19919,ATEKEFFFV True True ATEKEFFFV 96.154813 559.28233641386 16839222.0 19909.0 ENSG00000163568|ENST00000368130|AIM2 4.998665491739909 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19920 96.157 104.0 569240.0 25 0 88839.0 + 8951 FAMYPPSMI 9 102 528.7482141006933 1055.4818752681865 2 528.7473022341728 MULTI CID FTMS 0 0 0 19909 313551.75 1.0 0 0.0 11 Unmodified _FAMYPPSMI_ ENSG00000112576|ENST00000372991|CCND3;ENSG00000118971|ENST00000261254|CCND2;ENST00000513956.5_1_6:41904284-42016364:-|nuORF;ENST00000536795.1_1_12:4387934-4398180:+|nuORF;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3 32.116972079565 0.1225432171549407 3 {[MS]|[{M(Oxidation (M))|F}A]}M[HQ]{I|L}{I|L} 7 5 30.363 0.0 0.0 2.8767 0.0 0.0 0.0 212.0184712977365 212.0184712977365 11.540267557036842 0.0 0.0 0.0 0 0.0 0.7695510786217261 1.055462187404089 0.805462187404089 {[MS]|[{M(Oxidation (M))|F}A]}M[HQ]{I|L}{I|L} 2.8767 - 385 1 1.57 51049.1 1.0 14082 5836 19909 HBL1_DMSO_200M_050219_1,19920 HBL1_DMSO_200M_050219_1,19920,FAMYPPSMI True True FAMYPPSMI 96.157052 528.747302234173 6547433.0 19909.0 ENST00000513956.5_1_6:41904284-42016364:-|nuORF;;ENSG00000118971|ENST00000261254|CCND2;;ENST00000536795.1_1_12:4387934-4398180:+|nuORF;;ENSG00000112576|ENST00000372991|CCND3;;nc|ENSG00000112576|P30281-2|CCND3;;nc|ENSG00000112576|P30281-3|CCND3 4.299741665522258 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19921 96.168 644.0 479100.0 25 0 169510.0 + -1 AIPPSFASI 9 122 902.4989942395026 0 902.4979736208916 PEAK CID FTMS 0 0 0 19909 267838.84375 0.8260228665359295 -3 0.2950439453125 12 nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 3 EV{M(Oxidation (M))|F}{I|L}TTAT 8 -1 44.424 0.0 0.0 2.4639 0.0 0.0 772.4586075202177 165.10393701724846 937.562544537466 0.0 0.0 0.0 0.0 0 0.0 0.0 1.9489700043360187 0.0 EV{M(Oxidation (M))|F}{I|L}TTAT 2.4639 - 5490 + 1 1.57 202173.5 1.0 14083 5836 19909 HBL1_DMSO_200M_050219_1,19921 HBL1_DMSO_200M_050219_1,19921, False False AIPPSFASI 96.168321 902.497973620892 2513205.0 19909.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 3.769470691680908 1.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 19922 96.174 285.0 335800.0 25 0 38397.0 + 37558 TLIDLPGITRV 11 100 599.3637472949681 1196.712941656736 2 599.3636352419853 MULTI CID FTMS 0 0 0 19909 249597.109375 0.1267581404705696 4 -0.4841232299804687 13 Unmodified _TLIDLPGITRV_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 35.61225514009592 0.279986979807413 3 [{I|L}T]VE{I|L}V{[QS]|[NT]}{I|L}E 10 7 62.195 0.0 0.0 5.1972 0.0 0.0 0.0 82.06700311832265 82.06700311832265 39.91509031290598 0.0 0.0 0.0 0 1.0 2.0 0.7753187046026266 0.3807196863200844 [{I|L}T]VE{I|L}V{[QS]|[NT]}{I|L}E 5.1972 - 716 + 1 1.57 78193.8 1.0 14084 5836 19909 HBL1_DMSO_200M_050219_1,19922 HBL1_DMSO_200M_050219_1,19922,TLIDLPGITRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19923 96.179 285.0 335850.0 25 0 28152.0 + 30787 RIFGESIMIGV 11 103 611.3369592674288 1220.6593656016576 2 611.3370239138603 MULTI CID FTMS 0 0 0 19909 230117.875 0.1846638031689731 5 -0.6127166748046875 14 Unmodified _RIFGESIMIGV_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35;nc|ENSG00000163002|Q8NFH5-3|NUP35 30.7034409873982 0.3712764582118616 3 [PS]YVRS{I|L}M{I|L}GV 11 5 + 67.577 0.0 0.0 5.5361 5.5361 78.465 0.0 0.0 0.0 2.632414347745822 11.994784489444974 2.632414347745822 2.632414347745822 0 1.385151878060192 1.2218487496163564 1.110924374808178 0.0 [PS]YVRS{I|L}M{I|L}GV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVRS{I|L}M{I|L}GV;[PS]Y[{I|L}T]Q{I|L}M{I|L}R;[PS]YVTAA{I|L}M{I|L}R;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[{I|L}T]Q{I|L}M{I|L}R;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVTAA{I|L}M{I|L}R;[PS]YVT[RV]M{I|L}GV;{[VA]|[{I|L}G]}A{[RE]|[WV]}Y{I|L}M{I|L}GV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVT[RV]M{I|L}GV;[PS]Y[{I|L}T][AG]{I|L}M{I|L}R 5.5361;5.3205;4.5535;4.4233;4.3378;4.2077;4.043;3.952;3.8273;3.8027 -;-;-;-;-;-;-;-;-;- 1107 1 1.57 76315.4 1.0 14085 5836 19909 HBL1_DMSO_200M_050219_1,19923 HBL1_DMSO_200M_050219_1,19923,RIFGESIMIGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19924 96.182 167.0 554110.0 25 0 55557.0 25332 NALAIAVMNM 10 126 532.2667525689182 1062.5189522046362 2 532.2671386599541 MULTI CID FTMS 0 0 0 19909 223769.734375 0.3935456456750564 -2 0.2248306274414062 15 Oxidation (M) _NALAIAVM(Oxidation (M))NM_ ENSG00000139549|ENST00000649637|DHH 41.8396318013385 0.1381409678234242 3 {[QG]|[NA]}{I|L}A{I|L} 5 5 55.991 0.0 0.0 5.2697 0.0 0.0 0.0 577.2085328533268 577.2085328533268 35.31234684152075 0.0 0.0 0.0 0 1.424742501084005 2.0 0.0 0.9436726795685342 + {[QG]|[NA]}{I|L}A{I|L} 5.2697 + + 271 1 1.57 75954.5 1.0 14086 5836 19909 HBL1_DMSO_200M_050219_1,19924 HBL1_DMSO_200M_050219_1,19924,NALAIAVMNM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19925 96.196 800.0 135150.0 25 0 16980.0 + 13697 HQIPEFDNLYL 11 139 694.8458437851517 1387.677134637103 2 694.8455688357353 MULTI CID FTMS 0 0 0 19909 196747.171875 0.1889149470838506 5 -0.6127166748046875 16 Unmodified _HQIPEFDNLYL_ ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2-3|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1 30.7034409873982 0.3712764582118616 3 {[QN]|[E{I|L}]|[KN]}[MD]N{I|L}HQ{I|L}Y{I|L} 11 7 + 56.309 0.0 0.0 4.0578 4.0578 74.863 0.0 0.0 0.0 2.9667776403379307 17.72400621453422 2.9667776403379307 3.2010752059608905 0 0.718765315847925 0.7958800173440752 0.3494850021680094 1.4436726795685342 {[QN]|[E{I|L}]|[KN]}[MD]N{I|L}HQ{I|L}Y{I|L};[HQ]{I|L}[C(Carbamidomethyl (C))R]GDN{I|L}Y{I|L};[HQ]{I|L}[EP]{M(Oxidation (M))|F}DN{I|L}Y{I|L};[DN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}HQ{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}[MD]N{I|L}H[AG]{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}[MD]GG{I|L}HQ{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}ND{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[KS]{M(Oxidation (M))|F}DN{I|L}Y{I|L};{[{M(Oxidation (M))|F}D]|MM}[EP]N{I|L}HQ{I|L}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DH[KS]GDN{I|L}Y{I|L} 4.0578;3.8271;3.8097;3.4843;3.4;3.4;3.2762;3.2537;3.2375;3.2011 -;-;+;-;-;-;-;-;-;- + 1338 1 1.57 86255.9 0.9900000095367432 14087 5836 19909 HBL1_DMSO_200M_050219_1,19925 HBL1_DMSO_200M_050219_1,19925,HQIPEFDNLYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19926 96.202 241.0 465180.0 25 0 28598.0 + 44419 YMFPDTMLQA 10 138 608.7726731446664 1215.5307933561328 2 608.7723876833916 MULTI CID FTMS 0 0 0 19909 174757.140625 1.0 0 0.0 17 Unmodified _YMFPDTMLQA_ ENSG00000133104|ENST00000438666|SPART;ENST00000495510.1_1_13:36900679-36920374:-|nuORF 39.957323273325 0.1580177220464651 3 {[CP]|[EA]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}MRR 9 9 + 35.038 0.0 0.0 2.8825 2.8825 74.525 0.0 0.0 0.0 5.108856984453354 4.762036441594198 4.762036441594198 5.108856984453354 0 0.2396518287104437 0.0 0.6989700043360187 0.0 {[CP]|[EA]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}MRR;[DP]T{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}MRR;{NN|[MP]|[D{I|L}]|[EV]}[MT]{M(Oxidation (M))|F}{M(Oxidation (M))|F}MRR;{[CP]|[EA]}{I|L}{M(Oxidation (M))|F}MYMRR;[DP]TM{M(Oxidation (M))|F}YMRR;[QA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}MRR;{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}MRR;[DP]T{M(Oxidation (M))|F}MYMRR;{NN|[MP]|[D{I|L}]|[EV]}[MT]MYMRR;[{I|L}A]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}MRR 2.8825;2.4622;2.4215;2.3872;2.2146;2.0352;1.9857;1.9669;1.9262;1.6556 -;-;-;-;-;-;-;-;-;- 1088 1 1.57 83626.1 1.0 14088 5836 19909 HBL1_DMSO_200M_050219_1,19926 HBL1_DMSO_200M_050219_1,19926,YMFPDTMLQA False True YMFPDTMLQA 96.201619 608.772387683392 3201143.5 19909.0 ENSG00000133104|ENST00000438666|SPART;;ENST00000495510.1_1_13:36900679-36920374:-|nuORF 5.725788434346517 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19927 96.215 800.0 258100.0 25 0 16065.0 + -1 TAIDILTTV 9 156 946.4811070466008 1890.9476611600016 2 946.4796020388604 MULTI CID FTMS 0 0 0 19909 160533.046875 1.0 0 0.0 18 ENSG00000198700|ENST00000361565|IPO9 3 [TA]{I|L}D{I|L}T{I|L}TV 9 -1 50.895 0.0 0.0 2.6915 0.0 0.0 0.0 960.3890873914942 960.3890873914942 23.256996485622004 0.0 0.0 0.0 0 0.4247425010840047 0.958607314841775 1.7376954943324543 0.0 [TA]{I|L}D{I|L}T{I|L}TV 2.6915 - 4686 1 1.57 134022.6 1.0 14089 5836 19909 HBL1_DMSO_200M_050219_1,19927 HBL1_DMSO_200M_050219_1,19927, False False TAIDILTTV 96.215467 946.47960203886 106242.8515625 19909.0 ENSG00000198700|ENST00000361565|IPO9 2.882920583089193 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19928 96.229 759.0 127830.0 25 0 10362.0 45009 YPSYPLSTE 9 103 1056.4885637369766 1055.4812872703767 1 1059.979296863079 MULTI CID FTMS 0 0 0 19909 61702.51953125 0.3431665475985536 -2 0.2248306274414062 19 Unmodified _YPSYPLSTE_ ENSG00000165891|ENST00000322886|E2F7;ENST00000551558.1_1_12:77439797-77459307:-|nuORF;nc|ENSG00000165891|Q96AV8-2|E2F7;nc|ENSG00000165891|Q96AV8-3|E2F7 11.640296217721598 0.521594087909532 3 [Y{I|L}]YC(Carbamidomethyl (C)){I|L} 5 6 16.823 0.0 0.0 1.5938 0.0 0.0 0.0 340.1247558585205 340.1247558585205 8.671524721115718 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [Y{I|L}]YC(Carbamidomethyl (C)){I|L} 1.5938 - 444 1 1.57 62473.4 1.0 14090 5836 19909 HBL1_DMSO_200M_050219_1,19928 HBL1_DMSO_200M_050219_1,19928,YPSYPLSTE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19929 96.242 800.0 107980.0 25 0 6410.1 -1 0 112 739.1056322050283 2952.393422953713 4 739.3543578982353 MULTI CID FTMS 0 0 0 19909 158265.625 0.3519005792792851 5 -0.6127166748046875 20 3 [H{I|L}]VE[{I|L}A]Y{I|L} 8 -1 39.078 0.0 0.0 1.3236 0.0 0.0 0.0 2010.84770218804 2010.84770218804 27.998037644757044 0.0 0.0 0.0 0 1.5 1.3979400086720375 0.0 0.0 [H{I|L}]VE[{I|L}A]Y{I|L} 1.3236 - 620 1 1.57 68610.7 0.8999999761581421 14091 5836 19909 HBL1_DMSO_200M_050219_1,19929 HBL1_DMSO_200M_050219_1,19929, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19931 96.248 79.0 829500.0 25 0 62757.0 -1 0 59 641.3183309216022 2561.2442178200085 4 641.5696899294853 MULTI CID FTMS 0 0 0 19930 725473.875 0.3711554150321182 4 -0.5050888061523438 1 3 [{I|L}V]HEA{I|L}Y{I|L} 8 -1 61.375 0.0 0.0 2.3963 0.0 0.0 0.0 1619.6959749669593 1619.6959749669593 50.406075122407685 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.0 0.0 [{I|L}V]HEA{I|L}Y{I|L} 2.3963 - 207 1 1.564 61326.9 1.0 14092 5837 19930 HBL1_DMSO_200M_050219_1,19931 HBL1_DMSO_200M_050219_1,19931, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19932 96.254 341.0 517520.0 25 0 33375.0 -1 0 132 771.3662180162245 3081.4357661984977 4 771.6169311404228 MULTI CID FTMS 0 0 0 19930 556543.5625 0.4247298688124339 4 -0.5050888061523438 2 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 75.869 0.0 0.0 2.4621 0.0 0.0 0.0 2040.8234170994988 2040.8234170994988 36.66772480037345 0.0 0.0 0.0 0 1.6989700043360187 1.5228787452803376 0.3807196863200844 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.4621 - 1534 1 1.564 125894.3 1.0 14093 5837 19930 HBL1_DMSO_200M_050219_1,19932 HBL1_DMSO_200M_050219_1,19932, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19933 96.255 33.0 4344200.0 25 0 674390.0 + 1554 ALLDKLYAL 9 118 510.3105462520655 1018.606539570931 2 510.3106567263603 MULTI CID FTMS 0 0 0 19930 1821513.5 0.1520765157528896 -1 0.1076278686523437 3 Unmodified _ALLDKLYAL_ ENSG00000177971|ENST00000403490|IMP3 82.5293158979368 0.0169039238599547 3 [{I|L}A][TA]{I|L}YA{I|L}A{I|L} 10 5 + 85.778 0.0 0.0 8.4212 8.4212 87.837 0.0 0.0 0.0 12.904557560511918 15.026975159433531 12.904557560511918 3.672880812620974 0 1.2614393726401687 2.0 1.3778623208748888 0.0 [{I|L}A][TA]{I|L}YA{I|L}A{I|L};[{I|L}A][TA]{I|L}AY{I|L}A{I|L};[{I|L}A][TA]{I|L}A{I|L}YA{I|L};[{I|L}A]{I|L}[TA]YA{I|L}A{I|L};[{I|L}A][TA]Y{I|L}A{I|L}A{I|L};[{I|L}A]{I|L}DKY{I|L}A{I|L};[{I|L}A]{I|L}DK{I|L}YA{I|L};[{I|L}A][TA]{I|L}Y{I|L}AA{I|L};[{I|L}A]{I|L}[TA]AY{I|L}A{I|L};[{I|L}A]{I|L}[TA]A{I|L}YA{I|L} 8.4212;8.0606;7.9517;7.8301;7.7086;7.7086;7.5997;7.5466;7.4695;7.3606 -;-;-;-;-;-;+;-;-;- + 3155 1 1.564 110163.8 1.0 14094 5837 19930 HBL1_DMSO_200M_050219_1,19933 HBL1_DMSO_200M_050219_1,19933,ALLDKLYAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19934 96.256 57.0 1389400.0 25 0 370530.0 + 18667 LAILRLSL 8 72 449.80769777763936 897.6008426220787 2 449.8078796267509 MULTI CID FTMS 0 0 0 19930 1300133.875 0.129235852914525 -1 0.1076278686523437 4 Unmodified _LAILRLSL_ ENSG00000075240|ENST00000406902|GRAMD4 58.6788170122104 0.1149141431586871 3 [{I|L}A]R{I|L}{I|L}{I|L}S{I|L} 8 2 + 67.829 0.0 0.0 7.5567 7.5567 96.789 0.0 0.0 0.0 14.648867983026506 52.34427538256881 14.648867983026506 67.82882544760909 0 1.0 1.6989700043360187 0.3494850021680094 0.0 [{I|L}A]R{I|L}{I|L}{I|L}S{I|L} 7.5567 - 90 1 1.564 66005.2 1.0 14095 5837 19930 HBL1_DMSO_200M_050219_1,19934 HBL1_DMSO_200M_050219_1,19934,LAILRLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19935 96.258 54.0 980990.0 25 0 133820.0 + 45787 YYLGKILEM 9 79 565.3007576288063 0 565.3005248904228 PEAK CID FTMS 0 0 0 19930 548948.25 1.0 0 0.0 5 Unmodified _YYLGKILEM_ ENSG00000151746|ENST00000652176|BICD1;nc|ENSG00000151746|Q96G01-3|BICD1;nc|ENSG00000151746|Q96G01-4|BICD1 20.453626601364224 0.1969592619112565 3 YE{I|L}{I|L}{I|L}G 6 5 20.355 0.0 0.0 1.8035 0.0 0.0 312.10491994335626 125.07264124088124 437.1775611842375 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YE{I|L}{I|L}{I|L}G 1.8035 - 80 + 1 1.564 48369.2 1.0 14096 5837 19930 HBL1_DMSO_200M_050219_1,19935 HBL1_DMSO_200M_050219_1,19935,YYLGKILEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19936 96.26 89.0 670180.0 25 0 76049.0 + 15932 DALHAYFGI 9 86 503.7547488336625 1005.494944734125 2 503.7541686892509 MULTI CID FTMS 0 0 0 19930 430765.5625 0.7641581741403891 1 -0.1815261840820312 6 Unmodified _ISYHTCIGL_ ENSG00000164219|ENST00000419445|PGGT1B;nc|ENSG00000164219|P53609-2|PGGT1B 21.74664581756881 0.2544899275067181 3 [HA]{I|L}DAY{M(Oxidation (M))|F} 7 8 28.945 0.0 0.0 2.8787 0.0 0.0 0.0 185.09660424023755 185.09660424023755 12.746907182741367 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [HA]{I|L}DAY{M(Oxidation (M))|F} 2.8787 - 234 1 1.564 51233.8 1.0 14097 5837 19930 HBL1_DMSO_200M_050219_1,19936 HBL1_DMSO_200M_050219_1,19936,ISYHTCIGL False False DALHAYFGI 96.259804 503.754168689251 9338320.0 19930.0 ENSG00000164219|ENST00000419445|PGGT1B;;nc|ENSG00000164219|P53609-2|PGGT1B 3.495088179906209 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19937 96.271 670.0 357750.0 25 0 40967.0 + 10208 FQIIQSIRMGM 11 154 662.3486613510391 1322.6827697688782 2 662.3496581912041 MULTI CID FTMS 0 0 0 19930 290303.90625 0.4755859018036041 1 -0.1815261840820312 7 Unmodified _FQIIQSIRMGM_ ENSG00000120742|ENST00000239944|SERP1;ENSG00000151778|ENST00000379179|SERP2 110.79276546118962 0.0144472785759772 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SQ{I|L}{I|L}QE 11 8 + 96.023 0.0 0.0 7.2597 7.2597 85.85 0.0 0.0 0.0 4.545998064417091 4.545998064417091 4.545998064417091 3.935078169319297 0 0.8807196863200843 1.0457574905606752 0.8494850021680094 1.9291746928241125 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SQ{I|L}{I|L}QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}SQ{I|L}{I|L}QE;{M(Oxidation (M))|F}Q{I|L}{I|L}QS{I|L}RMGM;{M(Oxidation (M))|F}Q{I|L}{I|L}QS{I|L}RCC{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}S[AG]{I|L}{I|L}QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SQ{I|L}{I|L}[AG]E;{I|L}{I|L}Q[HD]SQ{I|L}{I|L}QE;[Q{I|L}]{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}SQ{I|L}{I|L}QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}S[AG]{I|L}{I|L}QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}SQ{I|L}{I|L}[AG]E 7.2597;6.9622;6.916;6.8992;6.5696;6.5696;6.5571;6.3229;6.2721;6.2721 -;-;+;-;-;-;-;-;-;- + 2803 1 1.564 177673.0 1.0 14098 5837 19930 HBL1_DMSO_200M_050219_1,19937 HBL1_DMSO_200M_050219_1,19937,FQIIQSIRMGM True True FQIIQSIRMGM 96.271475 662.349658191204 9217893.0 19930.0 ENSG00000151778|ENST00000379179|SERP2;;ENSG00000120742|ENST00000239944|SERP1 6.143337885538737 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19938 96.283 641.0 337680.0 25 0 18883.0 -1 0 149 854.7556511726688 2561.245124118206 3 855.0909911990166 MULTI CID FTMS 0 0 0 19930 291526.5 0.3836112548745823 4 -0.5050888061523438 8 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 82.674 0.0 0.0 3.2279 0.0 0.0 0.0 1520.6249818665062 1520.6249818665062 41.48834371105593 0.0 0.0 0.0 0 2.774227503252014 1.5228787452803376 0.2614393726401688 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 3.2279 - 3278 1 1.564 144189.6 1.0 14099 5837 19930 HBL1_DMSO_200M_050219_1,19938 HBL1_DMSO_200M_050219_1,19938, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19939 96.286 182.0 141060.0 25 0 42826.0 -1 0 44 604.0308601266745 1809.0707509802232 3 604.0306274294853 MULTI CID FTMS 0 0 0 19930 256360.265625 0.5698489973130673 1 -0.1815261840820312 9 3 {I|L} 1 -1 10.837 0.0 0.0 0.59906 0.0 0.0 1677.9757325249482 0.0 1677.9757325249482 0.0 3.8477553931086295 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.59906 - 10 + 1 1.564 31025.2 1.0 14100 5837 19930 HBL1_DMSO_200M_050219_1,19939 HBL1_DMSO_200M_050219_1,19939, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19940 96.289 146.0 458680.0 25 0 42065.0 + 1853 ALVESLITV 9 89 472.7867574738796 943.5589620145593 2 472.7867004275322 MULTI CID FTMS 0 0 0 19930 238935.5625 0.3973273568495249 -1 0.1076278686523437 10 Unmodified _ALVESLITV_ ENSG00000196233|ENST00000421806|LCOR 53.57557251787612 0.0325303259649373 3 [{I|L}A]VTD{I|L} 6 5 41.353 0.0 0.0 4.3827 0.0 0.0 0.0 328.1873549191093 328.1873549191093 17.40778928100886 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.2134679910804405 0.0 [{I|L}A]VTD{I|L} 4.3827 - 1156 1 1.564 59793.0 1.0 14101 5837 19930 HBL1_DMSO_200M_050219_1,19940 HBL1_DMSO_200M_050219_1,19940,ALVESLITV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19941 96.303 800.0 455480.0 25 0 66132.0 + 1730 ALPVSLPQI 9 179 469.2893981062825 936.5642432793652 2 469.2888061404228 MULTI CID FTMS 0 0 0 19930 224812.984375 0.4600241534541096 -3 0.33245849609375 11 Unmodified _ALPVSLPQI_ ENSG00000064703|ENST00000369702|DDX20 32.30548876998284 0.1201446275138228 3 [VP]S{I|L}PQ 6 3 44.257 0.0 0.0 4.7255 0.0 0.0 0.0 312.1898432300175 312.1898432300175 4.1718164598911045 0.0 0.0 0.0 0 0.0 1.0 1.4049471895720984 0.3252574989159953 + [VP]S{I|L}PQ 4.7255 + + 2528 1 1.564 274942.4 0.8799999952316284 14102 5837 19930 HBL1_DMSO_200M_050219_1,19941 HBL1_DMSO_200M_050219_1,19941,ALPVSLPQI True True ALPVSLPQI 96.302939 469.288806140423 6079158.5 19930.0 ENSG00000064703|ENST00000369702|DDX20 0.5786668260892233 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19942 96.311 377.0 320100.0 25 0 30319.0 + -1 CFIVNNLVA 9 164 525.2738676791072 1048.5331824250145 2 525.2739745974541 MULTI CID FTMS 0 0 0 19930 148587.609375 0.5438048630858925 1 -0.1815261840820312 12 Carbamidomethyl (C) _C(Carbamidomethyl (C))FIVNNLVA_ REV__ENSG00000113522|ENST00000378823|RAD50;REV__nc|ENSG00000113522|Q92878-2|RAD50;REV__nc|ENSG00000113522|Q92878-3|RAD50 16.942295170755138 0.3780752226737986 3 [QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 6 -1 28.932 0.0 0.0 2.7593 0.0 0.0 0.0 297.1875315557458 297.1875315557458 13.781446971601309 0.0 0.0 0.0 0 0.0 0.5228787452803376 0.3252574989159953 0.805462187404089 [QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 2.7593 - 951 1 1.564 98378.2 1.0 14103 5837 19930 HBL1_DMSO_200M_050219_1,19942 HBL1_DMSO_200M_050219_1,19942,CFIVNNLVA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19943 96.325 800.0 96707.0 25 0 4750.5 + -1 LALCDSEIQSL 11 133 624.8092390603057 1247.6039251874113 2 625.3122436404228 MULTI CID FTMS 0 0 0 19930 145450.25 0.5333499565645511 4 -0.5050888061523438 13 Carbamidomethyl (C) _LALC(Carbamidomethyl (C))DSEIQSL_ REV__ENSG00000159399|ENST00000290573|HK2;REV__ENST00000447818.2_1_X:79827372-79827747:-|nuORF 14.838274106304384 0.7264935675211688 3 [{I|L}A]{I|L}[TP]ESA 8 -1 19.843 0.0 0.0 1.5905 0.0 0.0 0.0 462.15889279899255 462.15889279899255 1.6390203222502464 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}A]{I|L}[TP]ESA 1.5905 - 1060 1 1.564 68387.5 0.75 14104 5837 19930 HBL1_DMSO_200M_050219_1,19943 HBL1_DMSO_200M_050219_1,19943,LALCDSEIQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19944 96.339 800.0 185460.0 25 0 12999.0 + 17873 KQLHFLVVL 9 161 366.23437890674177 1095.6813073204253 3 366.2342407107353 MULTI CID FTMS 0 0 0 19930 123145.3515625 0.5143078596158533 1 -0.1815261840820312 14 Unmodified _KQLHFLVVL_ ENST00000404488.7_1_22:50319154-50321136:+|nuORF 7.101721422024254 0.6667666702315642 3 {M(Oxidation (M))|F}{I|L}VV{I|L} 5 4 23.896 0.0 0.0 2.1809 0.0 0.0 506.2977430345615 0.0 506.2977430345615 0.0 7.442190502882156 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.0 + {M(Oxidation (M))|F}{I|L}VV{I|L} 2.1809 + + 158 1 1.564 124140.8 0.6100000143051147 14105 5837 19930 HBL1_DMSO_200M_050219_1,19944 HBL1_DMSO_200M_050219_1,19944,KQLHFLVVL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19945 96.354 800.0 150930.0 25 0 10336.0 -1 0 117 754.0458713656064 2259.115784697019 3 754.0474731326103 MULTI CID FTMS 0 0 0 19930 140543.234375 1.0 0 0.0 15 3 [{I|L}T]AAA{I|L}{I|L}WQ{I|L}N 11 -1 34.918 0.0 0.0 1.5457 0.0 0.0 0.0 1061.4524743143795 1061.4524743143795 11.540919674041085 0.0 0.0 0.0 0 0.0 2.0 0.5189301784845295 0.0 [{I|L}T]AAA{I|L}{I|L}WQ{I|L}N 1.5457 - 5157 1 1.564 91385.8 0.7400000095367432 14106 5837 19930 HBL1_DMSO_200M_050219_1,19945 HBL1_DMSO_200M_050219_1,19945, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19946 96.367 800.0 149590.0 25 0 14159.0 -1 0 156 343.7299474222965 685.445341911393 2 343.7302734255791 MULTI CID FTMS 0 0 0 19930 125163.9921875 1.0 0 0.0 16 3 G 1 -1 8.8224 0.0 0.0 1.2871 0.0 0.0 610.4124877627587 0.0 610.4124877627587 0.0 -3.6518923429382113 -3.6518923429382113 0.0 0 0.0 0.0 0.0 0.0 G 1.2871 - 26 + 1 1.564 96664.3 0.5299999713897705 14107 5837 19930 HBL1_DMSO_200M_050219_1,19946 HBL1_DMSO_200M_050219_1,19946, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19947 96.381 800.0 216920.0 25 0 14184.0 + 23311 LTAFFLPGVHS 11 173 594.8239856285222 1187.6334183238444 2 594.8225585818291 MULTI CID FTMS 0 0 0 19930 118926.875 1.0 0 0.0 17 Unmodified _LTAFFLPGVHS_ ENSG00000110400|ENST00000264025|NECTIN1;nc|ENSG00000110400|Q15223-2|NECTIN1;nc|ENSG00000110400|Q15223-3|NECTIN1 43.77239144664712 0.1542841003880809 3 [{I|L}T]A{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[QT]{M(Oxidation (M))|F} 9 5 44.918 0.0 0.0 3.7822 0.0 0.0 0.0 116.05115686588124 116.05115686588124 10.072705719417383 0.0 0.0 0.0 0 0.5356668758921829 1.6989700043360187 0.75 0.0 [{I|L}T]A{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[QT]{M(Oxidation (M))|F} 3.7822 - 1567 + 1 1.564 132512.5 0.7200000286102295 14108 5837 19930 HBL1_DMSO_200M_050219_1,19947 HBL1_DMSO_200M_050219_1,19947,LTAFFLPGVHS False True LTAFFLPGVHS 96.381214 594.822558581829 1236314.0 19930.0 nc|ENSG00000110400|Q15223-2|NECTIN1;;nc|ENSG00000110400|Q15223-3|NECTIN1;;ENSG00000110400|ENST00000264025|NECTIN1 5.33712371190389 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19948 96.396 800.0 129620.0 25 0 9619.3 -1 0 122 1111.095751941204 0 1111.095751941204 PEAK CID FTMS 0 0 0 -1 0 18 3 MEVNT{I|L}Y 7 -1 42.361 0.0 0.0 1.908 0.0 0.0 1109.6570057361207 257.09394251041255 1366.7509482465332 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4436726795685342 0.0 MEVNT{I|L}Y 1.908 - 1452 + 1 1.564 66953.8 0.9300000071525574 14109 5837 19930 HBL1_DMSO_200M_050219_1,19948 HBL1_DMSO_200M_050219_1,19948, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19949 96.41 800.0 192370.0 25 0 25997.0 + 21452 LPHLLPAL 8 144 437.2812170892497 872.5478812452993 2 437.2811157107353 MULTI CID FTMS 0 0 0 19930 98980.921875 0.5715885238344488 -1 0.1076278686523437 19 Unmodified _LPHLLPAL_ ENSG00000171421|ENST00000505059|MRPL36 64.08090720244739 0.1161809961245979 3 [H{I|L}]P{I|L}{I|L}PA{I|L} 8 2 + 60.156 0.0 0.0 6.8943 6.8943 61.815 0.0 0.0 0.0 1.4211382937389772 16.40978057358332 1.4211382937389772 0.0 0 0.8252574989159953 1.154901959985743 0.0 0.0 [H{I|L}]P{I|L}{I|L}PA{I|L};[H{I|L}]{I|L}P{I|L}PA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}{I|L}PA{I|L};[{I|L}P]H{I|L}{I|L}PA{I|L};[H{I|L}]{I|L}PP{I|L}A{I|L};[H{I|L}]P{I|L}P{I|L}A{I|L};[H{I|L}]{I|L}PPA{I|L}{I|L};[H{I|L}]P{I|L}PA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}P{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}PA{I|L}{I|L} 6.8943;6.8943;6.7314;6.1175;5.9763;5.9763;5.9485;5.9485;5.8134;5.7856 -;-;-;+;-;-;-;-;-;- + 357 1 1.564 119075.7 0.5099999904632568 14110 5837 19930 HBL1_DMSO_200M_050219_1,19949 HBL1_DMSO_200M_050219_1,19949,LPHLLPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19950 96.424 800.0 83959.0 25 0 2596.4 -1 0 90 745.8539683815309 2979.386767659724 4 746.6060668826103 MULTI CID FTMS 0 0 0 19930 72525.6484375 1.0 0 0.0 20 3 {I|L}YV 3 -1 12.703 0.0 0.0 0.42636 0.0 0.0 2040.8626110208545 560.2860201471311 2601.148631167985 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}YV 0.42636 - 107 + 1 1.564 51317.9 0.6499999761581421 14111 5837 19930 HBL1_DMSO_200M_050219_1,19950 HBL1_DMSO_200M_050219_1,19950, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19952 96.428 1.8 38555000.0 25 0 3960200.0 + 44568 YPFFRGVTI 9 81 550.3003780171566 1098.5862031011131 2 550.3013183474541 MULTI CID FTMS 0 0 0 19951 32874310.0 0.8868758609958081 1 -0.0601730346679687 1 Unmodified _YPFFRGVTI_ ENSG00000151465|ENST00000281141|CDC123;ENST00000467016.1_1_10:12238244-12240776:+|nuORF 29.43715596616401 0.1566398223704148 3 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 7 3 56.687 0.0 0.0 5.16 0.0 0.0 0.0 128.07227502994377 128.07227502994377 25.01689446210399 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.2614393726401688 0.0 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 5.16 - 134 + 1 1.565 60588.8 1.0 14112 5838 19951 HBL1_DMSO_200M_050219_1,19952 HBL1_DMSO_200M_050219_1,19952,YPFFRGVTI False True YPFFRGVTI 96.428259 550.301318347454 2217188640.0 19951.0 ENST00000467016.1_1_10:12238244-12240776:+|nuORF;;ENSG00000151465|ENST00000281141|CDC123 6.642599741617839 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19953 96.429 6.3 8361500.0 25 0 1242500.0 + 10620 FVNDIFERI 9 57 576.805936717175 1151.59732050115 2 576.8065673708916 MULTI CID FTMS 0 0 0 19951 6840976.5 0.1945424553895924 2 -0.1949691772460937 2 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 38.61474834105838 0.0830609365873449 3 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}E[R{I|L}] 9 0 + 70.724 0.0 0.0 6.1413 6.1413 88.168 0.0 0.0 0.0 56.28653141768609 9.44968960007344 9.44968960007344 9.208187539523747 0 0.805462187404089 0.0 0.0 0.805462187404089 + + {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}E[R{I|L}];{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}E[R{I|L}];{M(Oxidation (M))|F}V{I|L}[DN]{M(Oxidation (M))|F}E[R{I|L}] 6.1413;5.3417;4.5131 +;-;- + 140 + 1 1.565 47407.6 1.0 14113 5838 19951 HBL1_DMSO_200M_050219_1,19953 HBL1_DMSO_200M_050219_1,19953,FVNDIFERI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19954 96.431 14.0 5771700.0 25 0 965890.0 + 41325 VPIIWVPLV 9 61 518.3315558659916 1034.6485587987831 2 518.3318359255791 MULTI CID FTMS 0 0 0 19951 4703942.5 1.0 0 0.0 3 Unmodified _VPIIWVPLV_ ENSG00000103089|ENST00000219368|FA2H 56.04830969593885 0.0282699710924866 3 VP{I|L}V{M(Oxidation (M))|F} 5 5 55.79 0.0 0.0 5.3921 0.0 0.0 0.0 476.29990564517817 476.29990564517817 36.81031895404267 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 VP{I|L}V{M(Oxidation (M))|F} 5.3921 - 243 + 1 1.565 66763.2 1.0 14114 5838 19951 HBL1_DMSO_200M_050219_1,19954 HBL1_DMSO_200M_050219_1,19954,VPIIWVPLV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19955 96.432 20.0 5022500.0 25 0 497670.0 + + 40926 KAVELLVEL 9 100 507.3157868878592 1012.6170208425184 2 507.3162414431572 MULTI CID FTMS 0 0 0 19951 2794149.5 0.3295320647381463 2 -0.1949691772460937 4 Unmodified _VLSQLLVEL_ ENSG00000100554|ENST00000216442|ATP6V1D 69.10491478415734 0.0214449631113747 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}AK{I|L}VE{I|L} 9 -1 + 81.705 0.0 0.0 8.0687 8.0687 83.313 0.0 0.0 0.0 7.385606273598313 16.478174818886373 7.385606273598313 1.249387366082999 0 1.1861818737241734 1.3010299956639813 0.6989700043360187 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}AK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}AKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}A{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}K{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}VAK{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}V{I|L}AKVE{I|L};{[QN]|[E{I|L}]|[KN]}GK{I|L}{I|L}VE{I|L};[{I|L}V]EAK{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}GK{I|L}VE{I|L} 8.0687;7.9453;7.8975;7.4741;7.3784;7.3393;7.2159;7.1681;7.1263;7.042 -;-;-;-;-;-;-;-;-;- 2129 1 1.565 82369.3 1.0 14115 5838 19951 HBL1_DMSO_200M_050219_1,19955 HBL1_DMSO_200M_050219_1,19955,VLSQLLVEL False False KAVELLVEL 96.431794 507.316241443157 80306752.0 19951.0 ENSG00000100554|ENST00000216442|ATP6V1D 1.7320161412159605 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19956 96.433 45.0 1808200.0 25 0 168370.0 + 9963 FPGLAIKI 8 93 429.776080166156 857.537607399112 2 429.7760803103447 MULTI CID FTMS 0 0 0 19951 1453580.0 0.1316633285411183 5 -0.5547561645507812 5 Unmodified _FPGLAIKI_ ENSG00000142945|ENST00000372224|KIF2C;ENST00000455186.5_1_1:45205634-45205691:+|nuORF;ENST00000493027.5_1_1:45205556-45221765:+|nuORF 86.12129899796855 0.0650563179454676 3 {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L} 8 0 + 65.052 0.0 0.0 7.5859 7.5859 88.5 0.0 0.0 0.0 13.399480616943508 6.53212513775344 6.53212513775344 5.471062485323515 0 1.3001648626366045 0.0 0.0 0.6747425010840047 + + {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L};{M(Oxidation (M))|F}P{I|L}GA{I|L}K{I|L};{M(Oxidation (M))|F}{I|L}PGA{I|L}K{I|L};{M(Oxidation (M))|F}PG{I|L}A{I|L}{I|L}K;{M(Oxidation (M))|F}P{I|L}Q{I|L}K{I|L};{M(Oxidation (M))|F}{I|L}PQ{I|L}K{I|L};{M(Oxidation (M))|F}P{I|L}GA{I|L}{I|L}K;{M(Oxidation (M))|F}{I|L}PGA{I|L}{I|L}K;{M(Oxidation (M))|F}P{I|L}Q{I|L}{I|L}K;{M(Oxidation (M))|F}{I|L}PQ{I|L}{I|L}K 7.5859;6.9479;6.9428;6.8242;6.2148;6.2096;6.1862;6.181;5.4531;5.4479 +;-;-;-;-;-;-;-;-;- + 274 + 1 1.565 69538.1 1.0 14116 5838 19951 HBL1_DMSO_200M_050219_1,19956 HBL1_DMSO_200M_050219_1,19956,FPGLAIKI True True FPGLAIKI 96.43303 429.776080310345 389472672.0 19951.0 ENSG00000142945|ENST00000372224|KIF2C;;ENST00000493027.5_1_1:45205556-45221765:+|nuORF;;ENST00000455186.5_1_1:45205634-45205691:+|nuORF 4.4178466796875 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19957 96.434 36.0 1659000.0 25 0 168090.0 + 43298 WKLFLAHG 8 73 486.276888480758 970.539224028316 2 486.2763549685478 MULTI CID FTMS 0 0 0 19951 1308200.5 0.5279761252532272 2 -0.1949691772460937 6 Unmodified _WKLFLAHG_ REV__ENST00000272133.3_1_1:224927453-224927669:+|nuORF 13.50788311687929 0.7113601687236069 3 WP{M(Oxidation (M))|F}{I|L} 4 -1 49.667 0.0 0.0 5.1175 0.0 0.0 0.0 424.2320283601652 424.2320283601652 38.697887582883936 0.0 0.0 0.0 0 0.25 1.5228787452803376 0.0 0.0 WP{M(Oxidation (M))|F}{I|L} 5.1175 - 44 + 1 1.565 52671.1 1.0 14117 5838 19951 HBL1_DMSO_200M_050219_1,19957 HBL1_DMSO_200M_050219_1,19957,WKLFLAHG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19958 96.436 64.0 1179700.0 25 0 122550.0 + 16296 IWPEKVLDI 9 81 556.8206668955752 1111.6267808579505 2 556.8206664919853 MULTI CID FTMS 0 0 0 19951 843467.75 0.871951179721527 1 -0.0601730346679687 7 Unmodified _IWPEKVLDI_ ENSG00000135108|ENST00000622495|FBXO21 24.020572477871973 0.2255576514309169 3 [EP]KV{I|L}D{I|L}[W{I|L}] 9 4 + 48.35 0.0 0.0 4.3495 4.3495 84.362 0.0 0.0 0.0 4.804879460491463 35.585952605008764 4.804879460491463 14.259687322722812 0 0.0 1.0 0.4247425010840047 0.0 [EP]KV{I|L}D{I|L}[W{I|L}];{[TV]|[{I|L}S]}[PG]V{I|L}D{I|L}[W{I|L}];{[TV]|[{I|L}S]}[VG]P{I|L}D{I|L}[W{I|L}];[TP][VG]V{I|L}D{I|L}[W{I|L}];{[TV]|[{I|L}S]}[PS]{I|L}[PS]{I|L}[W{I|L}] 4.3495;3.0667;2.6375;2.1512;0.45625 -;-;-;-;- 215 1 1.565 62508.0 1.0 14118 5838 19951 HBL1_DMSO_200M_050219_1,19958 HBL1_DMSO_200M_050219_1,19958,IWPEKVLDI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19959 96.437 59.0 797750.0 25 0 207830.0 + 2696 ATEKEFFFV 9 72 559.2821922010028 1116.5498314688057 2 559.2822143435478 MULTI CID FTMS 0 0 0 19951 818989.625 1.0 0 0.0 8 Unmodified _ATEKEFFFV_ ENSG00000163568|ENST00000368130|AIM2 21.53697664764585 0.2571576504437394 3 [TA][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{[WT]|[RM]}{M(Oxidation (M))|F}V 9 5 + 42.98 0.0 0.0 3.8493 3.8493 76.128 0.0 0.0 0.0 13.63885281793209 4.771212547196619 4.771212547196619 4.771212547196619 0 0.805462187404089 1.154901959985743 0.3252574989159953 0.0 [TA][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{[WT]|[RM]}{M(Oxidation (M))|F}V;[TA][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{[WT]|[RM]}V{M(Oxidation (M))|F};[TA][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]MV;[{M(Oxidation (M))|F}T][R{M(Oxidation (M))|F}]ETA{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}T][R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[PG]{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}T][R{M(Oxidation (M))|F}][PG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}T][R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V][PG] 3.8493;3.422;2.3533;2.1038;1.2704;1.2487;0.47016 -;-;-;-;-;-;- 182 + 1 1.565 42692.6 1.0 14119 5838 19951 HBL1_DMSO_200M_050219_1,19959 HBL1_DMSO_200M_050219_1,19959,ATEKEFFFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19960 96.44 117.0 683840.0 25 0 29029.0 -1 0 85 791.372936740873 2371.0969808228188 3 792.0421630740166 MULTI CID FTMS 0 0 0 19951 767589.1875 1.0 0 0.0 9 3 {[HG]|PP}APPPPP 8 -1 27.344 0.0 0.0 1.1532 0.0 0.0 0.0 1617.6667558328202 1617.6667558328202 -1.5870318033397268 0.0 -1.5870318033397268 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}APPPPP 1.1532 - 1959 1 1.565 66534.8 1.0 14120 5838 19951 HBL1_DMSO_200M_050219_1,19960 HBL1_DMSO_200M_050219_1,19960, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19961 96.442 104.0 749930.0 25 0 130230.0 + 15659 IQLPSEKAIFL 11 68 629.8738860896908 1257.7332192461815 2 629.8745605349541 MULTI CID FTMS 0 0 0 19951 565436.8125 0.3063749985776759 -2 0.289154052734375 10 Unmodified _IQLPSEKAIFL_ ENSG00000034713|ENST00000037243|GABARAPL2 37.07464296494664 0.257459615863268 3 [Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}Q{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 11 5 + 67.171 0.0 0.0 5.3407 5.3407 84.645 0.0 0.0 0.0 18.577735547020893 5.862435673934286 5.862435673934286 9.01863755803668 0 0.9247425010840048 1.3979400086720375 1.1237125054200234 0.4247425010840047 [Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}Q{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[Q{I|L}]{[CP]|[EA]}{I|L}A{I|L}Q{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}[AG]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[Q{I|L}]{[CP]|[EA]}{I|L}A{I|L}[AG]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[Q{I|L}]{I|L}PRRC{I|L}{M(Oxidation (M))|F}{I|L};[PS]EKA{I|L}{I|L}Q{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[Q{I|L}]{I|L}P[KA]{I|L}A[YE]{I|L};[Q{I|L}]{I|L}PCRR{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]A{I|L}{I|L}Q{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[PS]EK{I|L}A{I|L}Q{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 5.3407;4.6236;4.6149;3.8978;3.8636;3.6074;3.4504;3.1835;2.9417;2.8903 -;-;-;-;-;-;-;-;-;- 439 1 1.565 70350.4 1.0 14121 5838 19951 HBL1_DMSO_200M_050219_1,19961 HBL1_DMSO_200M_050219_1,19961,IQLPSEKAIFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19962 96.445 157.0 395170.0 25 0 42577.0 + 2900 AVFPDDMPTL 10 93 553.2649900757076 1104.515427218215 2 553.2648193240166 MULTI CID FTMS 0 0 0 19951 419351.3125 0.1686072675194102 5 -0.5547561645507812 11 Unmodified _AVFPDDMPTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 48.345845343767074 0.089859443182303 3 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}[RK]E{I|L}P 8 6 30.623 0.0 0.0 2.7725 0.0 0.0 0.0 160.9626677790151 160.9626677790151 1.0834938564822494 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}[RK]E{I|L}P 2.7725 - 168 1 1.565 54980.5 1.0 14122 5838 19951 HBL1_DMSO_200M_050219_1,19962 HBL1_DMSO_200M_050219_1,19962,AVFPDDMPTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19963 96.449 183.0 333160.0 25 0 44488.0 + 45795 YYLPKLLSY 9 85 580.3232165290751 1158.6318801249502 2 580.3238403201103 MULTI CID FTMS 0 0 0 19951 362095.875 0.4030866648985272 2 -0.1949691772460937 12 Unmodified _YYLPKLLSY_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA;nc|ENSG00000115970|Q6YHU6-6|THADA 14.40537977576856 0.4467465336100671 3 YY{I|L}[HM]{I|L}{I|L}P 8 4 41.872 0.0 0.0 3.6139 0.0 0.0 0.0 125.07236658267811 125.07236658267811 17.179250024847263 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YY{I|L}[HM]{I|L}{I|L}P 3.6139 - 175 + 1 1.565 49343.5 1.0 14123 5838 19951 HBL1_DMSO_200M_050219_1,19963 HBL1_DMSO_200M_050219_1,19963,YYLPKLLSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19964 96.451 88.0 422490.0 25 0 47677.0 -1 LPVCVKELSV 10 73 572.3233133078575 1142.6320736825148 2 572.3253661990166 MULTI CID FTMS 0 0 0 19951 370206.125 0.1248683709466936 7 -0.8192062377929688 13 Carbamidomethyl (C) _LPVC(Carbamidomethyl (C))VKELSV_ ENST00000482777.5_1_12:111891479-111891701:-|nuORF;ENST00000484991.1_1_12:111890502-111891686:-|nuORF 20.453626601364224 0.5043500229302764 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[Q{I|L}][NP]{I|L}{I|L}SV 10 -1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[Q{I|L}][NP]{I|L}{I|L} + + 17.691 5.2209 0.55629 1.5482 1.5482 48.557 0.0 0.0 0.0 0.0 -3.99166239860314 -3.99166239860314 0.0 0 0.0 0.0 0.2742275032520141 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[Q{I|L}][NP]{I|L}{I|L}SV 1.5482 - 135 + 1 1.565 36123.2 1.0 14124 5838 19951 HBL1_DMSO_200M_050219_1,19964 HBL1_DMSO_200M_050219_1,19964,LPVCVKELSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19965 96.457 332.0 356410.0 25 0 66568.0 + 11781 GLLEKLTAI 9 117 479.30256450590775 956.5905760786156 2 479.3024169802666 MULTI CID FTMS 0 0 0 19951 356135.375 1.0 0 0.0 14 Unmodified _GLLEKLTAI_ ENSG00000141384|ENST00000269142|TAF4B 63.960520009940105 0.0238892913700936 3 {[VA]|[{I|L}G]}{I|L}S{I|L}TAVA{I|L} 10 4 + 83.198 0.0 0.0 8.6973 8.6973 91.064 0.0 0.0 0.0 21.519862825870675 15.898255349109505 15.898255349109505 6.360622406739239 0 1.6237125054200234 2.0 1.5356668758921828 0.0 {[VA]|[{I|L}G]}{I|L}S{I|L}TAVA{I|L};{[VA]|[{I|L}G]}{I|L}ST{I|L}AVA{I|L};{[VA]|[{I|L}G]}S{I|L}{I|L}TAVA{I|L};{[VA]|[{I|L}G]}{I|L}STA{I|L}VA{I|L};{[VA]|[{I|L}G]}{I|L}S{I|L}G{I|L}TA{I|L};{[VA]|[{I|L}G]}{I|L}TVTAVA{I|L};{[VA]|[{I|L}G]}{I|L}S{I|L}T[Q{I|L}]{I|L};{[VA]|[{I|L}G]}S{I|L}T{I|L}AVA{I|L};{[VA]|[{I|L}G]}S{I|L}TA{I|L}VA{I|L};{[VA]|[{I|L}G]}{I|L}TS{I|L}AVA{I|L} 8.6973;8.0324;7.888;7.7696;7.4072;7.3092;7.2838;7.223;6.9603;6.6443 -;-;-;-;-;-;-;-;-;- 2994 1 1.565 93491.6 1.0 14125 5838 19951 HBL1_DMSO_200M_050219_1,19965 HBL1_DMSO_200M_050219_1,19965,GLLEKLTAI True True GLLEKLTAI 96.456611 479.302416980267 3414385.75 19951.0 ENSG00000141384|ENST00000269142|TAF4B 3.730158885320028 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19966 96.459 113.0 532710.0 25 0 83631.0 + 1518 ALIEKLVEL 9 91 514.3234928833207 1026.6324328334413 2 514.3239013552666 MULTI CID FTMS 0 0 0 19951 308165.0 0.1271327292467675 5 -0.5547561645507812 15 Unmodified _ALIEKLVEL_ ENSG00000014138|ENST00000265465|POLA2;ENST00000532469.1_1_11:65029724-65047127:+|nuORF 41.8396318013385 0.0653578398400075 3 [{I|L}A]{I|L}{M(Oxidation (M))|F}V{I|L}{I|L}DG 9 5 58.738 0.0 0.0 5.7215 0.0 0.0 0.0 82.0670412652953 82.0670412652953 31.46570840778184 0.0 0.0 0.0 0 0.6549471895720984 2.0 0.3807196863200844 0.0 [{I|L}A]{I|L}{M(Oxidation (M))|F}V{I|L}{I|L}DG 5.7215 - 1115 + 1 1.565 52744.5 1.0 14126 5838 19951 HBL1_DMSO_200M_050219_1,19966 HBL1_DMSO_200M_050219_1,19966,ALIEKLVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19967 96.462 142.0 509980.0 25 0 47113.0 23275 LSWNKTVEL 9 94 545.3003992159358 1088.5862454986716 2 545.3013793826103 MULTI CID FTMS 0 0 0 19951 330309.4375 0.3621333545658964 5 -0.5547561645507812 16 Unmodified _LSWNKTVEL_ ENSG00000196358|ENST00000393229|NTNG2;nc|ENSG00000196358|Q96CW9-2|NTNG2 26.268140514670165 0.1969607489560049 3 {[QN]|[E{I|L}]|[KN]}SW{I|L}TVE{I|L} 9 3 + 54.898 0.0 0.0 5.0431 5.0431 76.181 0.0 0.0 0.0 5.918343468218062 13.645905653187434 5.918343468218062 2.218487496163561 0 0.2887254899964357 0.0 0.7396518287104438 0.0 {[QN]|[E{I|L}]|[KN]}SW{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[CA]|SS}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}VV{[MG]|[TS]}TVE{I|L};{[QN]|[E{I|L}]|[KN]}VVV[CS]VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[WT]|[RM]}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[WT]|[RM]}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}VV[R{M(Oxidation (M))|F}]VE{I|L};{[QN]|[E{I|L}]|[KN]}V[YQ]PVE{I|L};[{I|L}V]E{[WT]|[RM]}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}VV[DG][{M(Oxidation (M))|F}V]{I|L} 5.0431;4.8393;4.8393;4.5146;4.4994;4.2392;3.6698;3.5971;3.5308;3.1574 -;-;-;-;-;-;-;-;-;- 1160 1 1.565 61995.8 1.0 14127 5838 19951 HBL1_DMSO_200M_050219_1,19967 HBL1_DMSO_200M_050219_1,19967,LSWNKTVEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19968 96.465 168.0 481770.0 25 0 90718.0 + 18734 LALELPVQN 9 107 498.7906184380054 0 498.7905151247978 PEAK CID FTMS 0 0 0 19951 304191.5625 1.0 0 0.0 17 Unmodified _LALELPVQN_ REV__ENST00000400109.2_1_13:19879246-19879522:-|nuORF 36.04419817259434 0.0811646137502998 3 {I|L}QN{I|L}E 5 -1 24.702 0.0 0.0 2.4812 0.0 0.0 315.2134257414421 80.01497064761952 395.2283963890616 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6989700043360187 {I|L}QN{I|L}E 2.4812 - 547 + 1 1.565 67382.1 1.0 14128 5838 19951 HBL1_DMSO_200M_050219_1,19968 HBL1_DMSO_200M_050219_1,19968,LALELPVQN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19969 96.468 154.0 295070.0 25 0 36060.0 + 12464 GVAESIHLWEV 11 77 620.3221542650405 1238.6297555968808 2 620.3212768435478 MULTI CID FTMS 0 0 0 19951 299670.9375 0.1392695574602474 2 -0.1949691772460937 18 Unmodified _GVAESIHLWEV_ ENSG00000065268|ENST00000585809|WDR18 45.69961567697781 0.1414455360291008 3 [H{I|L}]SEA{I|L}DAERV 11 8 + 66.064 0.0 0.0 5.3336 5.3336 78.131 0.0 0.0 0.0 13.94335884403212 36.62695622755521 13.94335884403212 2.9659780392387347 0 0.0 0.958607314841775 0.3807196863200844 0.0 [H{I|L}]SEA{I|L}DAERV;[H{I|L}]SEA{I|L}DAREV;[H{I|L}]S{I|L}{[CP]|[EA]}DAERV;[H{I|L}]{I|L}S{[CP]|[EA]}DAERV;R[{M(Oxidation (M))|F}V]AD{I|L}[YQ]EV;[H{I|L}]S{I|L}{[CP]|[EA]}DAREV;{NN|[MP]|[D{I|L}]|[EV]}[HT]A{I|L}DAERV;[H{I|L}]{I|L}S{[CP]|[EA]}DAREV;[H{I|L}]S[KG]QDAERV;{NN|[MP]|[D{I|L}]|[EV]}[HT]A{I|L}DAREV 5.3336;5.0942;4.3059;4.1637;4.1523;4.0664;4.018;3.9243;3.9207;3.7786 -;-;-;-;-;-;-;-;-;- 2138 1 1.565 40544.0 1.0 14129 5838 19951 HBL1_DMSO_200M_050219_1,19969 HBL1_DMSO_200M_050219_1,19969,GVAESIHLWEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19970 96.47 99.0 380310.0 25 0 49063.0 -1 MLYMPWTV 8 76 528.7482141006933 1055.4818752681865 2 528.7487670779228 MULTI CID FTMS 0 0 0 19951 297895.0 0.9500664563345604 2 -0.1949691772460937 19 Oxidation (M) _MLYM(Oxidation (M))PWTV_ ENST00000542060.5_1_1:180942745-180942838:-|nuORF 10.183394434864962 0.7604730176254005 3 [VP]{I|L} 3 -1 17.28 0.0 0.0 1.6372 0.0 0.0 0.0 743.2526021571115 743.2526021571115 2.5874185669681573 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [VP]{I|L} 1.6372 - 71 1 1.565 39311.3 1.0 14130 5838 19951 HBL1_DMSO_200M_050219_1,19970 HBL1_DMSO_200M_050219_1,19970,MLYMPWTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19971 96.484 800.0 255440.0 25 0 21682.0 + 43029 DAYVLPKLYVKL 12 156 711.4237492146351 1420.83294549607 2 711.9263183474541 MULTI CID FTMS 0 0 0 19951 238693.140625 1.0 0 0.0 20 Unmodified _VYAFKRLFHLK_ nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 17.11289562659939 0.6791789249425932 3 {[DA]|[EG]}YV{I|L}PK{I|L}YVK{I|L} 12 10 {[DA]|[EG]}YV + + 41.458 26.771 5.9731 2.9179 2.9179 50.051 0.0 0.0 0.0 0.0 13.878661203554609 0.0 0.0 0 1.394599018282542 0.0 0.0 0.9947026752325154 {[DA]|[EG]}YV{I|L}PK{I|L}YVK{I|L} 2.9179 - 2527 + 1 1.565 146239.0 0.949999988079071 14131 5838 19951 HBL1_DMSO_200M_050219_1,19971 HBL1_DMSO_200M_050219_1,19971,VYAFKRLFHLK False False DAYVLPKLYVKL 96.484188 711.4253 2429602.5 19951.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 7.181661605834961 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19973 96.488 90.0 601740.0 25 0 59983.0 -1 NALAIAVMNM 10 81 532.2667525689182 1062.5189522046362 2 532.2672607302666 MULTI CID FTMS 0 0 0 19972 247092.0625 0.4345628131943118 1 -0.134796142578125 1 Oxidation (M) _NALAIAVM(Oxidation (M))NM_ ENSG00000139549|ENST00000649637|DHH 29.081581746732265 0.3152867722954398 3 {[QG]|[NA]}{I|L}A{I|L} 5 -1 47.323 0.0 0.0 4.4538 0.0 0.0 0.0 577.2084107830143 577.2084107830143 24.92710442814697 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.8778623208748889 {[QG]|[NA]}{I|L}A{I|L} 4.4538 + + 205 1 1.565 48738.1 1.0 14132 5839 19972 HBL1_DMSO_200M_050219_1,19973 HBL1_DMSO_200M_050219_1,19973,NALAIAVMNM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19974 96.499 593.0 248840.0 25 0 19120.0 -1 0 113 1186.5547871823137 2371.095021431427 2 1187.560229480267 MULTI CID FTMS 0 0 0 19972 191245.625 0.7068758882352832 2 -0.2633895874023437 2 3 PPPPN 5 -1 32.713 0.0 0.0 1.3796 0.0 0.0 1528.6643945271987 337.15217004947505 1865.8165645766733 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.1989700043360187 PPPPN 1.3796 - 1435 + 1 1.565 93382.1 1.0 14133 5839 19972 HBL1_DMSO_200M_050219_1,19974 HBL1_DMSO_200M_050219_1,19974, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19975 96.502 132.0 583250.0 25 0 95937.0 + 43925 YGIENEVFL 9 109 542.2716095089415 1082.528666084683 2 542.2716552615166 MULTI CID FTMS 0 0 0 19972 596539.0625 0.756133218082854 -1 0.0601730346679687 3 Unmodified _YGIENEVFL_ ENSG00000111716|ENST00000350669|LDHB;ENST00000542765.4_1_12:21788478-21790169:-|nuORF 37.97399986684836 0.0865783450051559 3 {NN|[MP]|[D{I|L}]|[EV]}AYNEV{M(Oxidation (M))|F}{I|L} 9 4 + 41.971 0.0 0.0 3.8771 3.8771 69.371 0.0 0.0 0.0 6.018506493566413 5.3744678127529255 5.3744678127529255 0.3617532050066074 0 0.7742275032520141 1.6989700043360187 0.0 0.8979400086720375 {NN|[MP]|[D{I|L}]|[EV]}AYNEV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NEAYV{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}EVAYV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}N{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}AYGGEV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGEAYV{M(Oxidation (M))|F}{I|L};[{I|L}A]DYNEV{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VEAYV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}A[DG]AYV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GG{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EV{M(Oxidation (M))|F}{I|L} 3.8771;3.8437;3.3211;3.1419;3.0265;2.9931;2.7873;2.7426;2.5523;2.2913 -;-;-;-;-;-;-;-;-;- 510 1 1.565 66696.9 1.0 14134 5839 19972 HBL1_DMSO_200M_050219_1,19975 HBL1_DMSO_200M_050219_1,19975,YGIENEVFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19976 96.504 107.0 734310.0 25 0 115430.0 + 14079 IAPLLPTSL 9 66 924.5762201790473 923.5689437124472 1 924.5771362185478 MULTI CID FTMS 0 0 0 19972 398231.28125 0.7670236206709341 1 -0.134796142578125 4 Unmodified _IAPLLPTSL_ ENSG00000014123|ENST00000369278|UFL1;nc|ENSG00000014123|O94874-2|UFL1;nc|ENSG00000014123|O94874-3|UFL1 60.38955033654506 0.025866396858536 3 [{I|L}P]{I|L}A{I|L}[DV]A{I|L} 9 5 + 61.176 0.0 0.0 6.6239 6.6239 79.632 0.0 0.0 0.0 20.15794267183232 46.56681865368853 20.15794267183232 1.1879668873561542 0 0.8807196863200843 1.3010299956639813 0.3494850021680094 0.0 [{I|L}P]{I|L}A{I|L}[DV]A{I|L};[{I|L}P]{I|L}A{I|L}PTS{I|L};[{I|L}P]A{I|L}{I|L}[DV]A{I|L};[{I|L}P]{I|L}A{I|L}{[RE]|[WV]}{I|L};[{I|L}P]A{I|L}{I|L}PTS{I|L};[{I|L}P]A{I|L}{I|L}{[RE]|[WV]}{I|L};[{I|L}P]{I|L}{I|L}A[DV]A{I|L};[{I|L}P]{I|L}{I|L}APTS{I|L};[{I|L}P]{I|L}A[DV]{I|L}A{I|L};[{I|L}P]{I|L}{I|L}A{[RE]|[WV]}{I|L} 6.6239;6.4952;6.2979;6.2484;6.1693;5.9224;5.8857;5.7571;5.5659;5.5102 -;-;-;-;-;-;-;-;-;- 295 1 1.565 55495.4 1.0 14135 5839 19972 HBL1_DMSO_200M_050219_1,19976 HBL1_DMSO_200M_050219_1,19976,IAPLLPTSL True True IAPLLPTSL 96.503848 924.577136218548 4305165.0 19972.0 nc|ENSG00000014123|O94874-3|UFL1;;ENSG00000014123|ENST00000369278|UFL1;;nc|ENSG00000014123|O94874-2|UFL1 5.0020036697387695 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19977 96.509 254.0 404460.0 25 0 56423.0 + 1918 AMFENFVSV 9 140 522.2458644336405 1042.4771759340808 2 522.2469970583916 MULTI CID FTMS 0 0 0 19972 175760.15625 0.8073676655302351 -1 0.0601730346679687 5 Unmodified _AMFENFVSV_ ENSG00000136937|ENST00000375147|NCBP1;ENST00000478100.3_1_9:100403935-100409818:+|nuORF 30.63653989081413 0.1413794767160703 3 DD{I|L}{M(Oxidation (M))|F}S[HN]PV 9 7 + 30.396 0.0 0.0 2.9158 2.9158 81.109 0.0 0.0 0.0 7.216489256359114 0.2018122933698443 0.2018122933698443 15.898255349109506 0 0.0 0.0 0.805462187404089 0.0 DD{I|L}{M(Oxidation (M))|F}S[HN]PV;DD{I|L}{M(Oxidation (M))|F}[YK]{[QD]|[EN]|[WG]|[KD]|[RS]};{[DS]|[MA]|[CV]|TT}VY{M(Oxidation (M))|F}V[WQ];[R{M(Oxidation (M))|F}]{[MS]|[{M(Oxidation (M))|F}A]}[WM]SV;{[DS]|[MA]|[CV]|TT}VYV{M(Oxidation (M))|F}[WQ];[{I|L}T]{M(Oxidation (M))|F}C{M(Oxidation (M))|F}V[WQ];[{M(Oxidation (M))|F}E]N[YK]{I|L}DD;[{M(Oxidation (M))|F}T][YQ][W{I|L}]SV;DD[KT][HT]PMV;[{I|L}T]{M(Oxidation (M))|F}CV{M(Oxidation (M))|F}[WQ] 2.9158;1.3907;1.2296;1.0543;0.94088;0.90055;0.68232;0.63892;0.61859;0.61178 -;-;-;-;-;-;-;-;-;- 723 + 1 1.565 87936.3 1.0 14136 5839 19972 HBL1_DMSO_200M_050219_1,19977 HBL1_DMSO_200M_050219_1,19977,AMFENFVSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19978 96.522 800.0 287870.0 25 0 12553.0 + 4190 DAPIVAHLWEY 11 188 657.3295540620028 1312.6445551908057 2 657.3281127810478 MULTI CID FTMS 0 0 0 19972 175176.8125 0.195342943612349 -2 0.24169921875 6 Unmodified _DAPIVAHLWEY_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 103.82355648334676 0.0046447410502644 3 {[DA]|[EG]}P{I|L}VAH{I|L}WEY 11 0 + 74.738 0.0 0.0 5.6937 5.6937 75.413 0.0 0.0 0.0 0.4638846195255439 0.562889063376403 0.4638846195255439 0.4638846195255439 0 3.0138793319624577 1.3979400086720375 0.3054621874040891 0.0 + + {[DA]|[EG]}P{I|L}VAH{I|L}WEY;[{I|L}P]VAHW{I|L}EGEY;[{I|L}P]VAH{I|L}WEGEY;{[DA]|[EG]}P{I|L}[{I|L}P]P{I|L}EGEY;{[DA]|[EG]}P{I|L}VAH{I|L}EWY;{[DA]|[EG]}P{I|L}{[QN]|[E{I|L}]|[KN]}P{I|L}PGEY;[{I|L}P]VAH{I|L}{[DA]|[EG]}WEY;{[DA]|[EG]}P{I|L}[{I|L}P]E{I|L}PGEY;[{I|L}P]VADAH{I|L}WEY;[H{I|L}]G{I|L}PW{I|L}EGEY 5.6937;5.6584;5.5447;5.5357;5.5111;5.2457;5.0554;5.0552;4.9901;4.9635 +;-;-;-;-;-;-;-;-;- + 15267 1 1.565 168909.3 0.800000011920929 14137 5839 19972 HBL1_DMSO_200M_050219_1,19978 HBL1_DMSO_200M_050219_1,19978,DAPIVAHLWEY True True DAPIVAHLWEY 96.522421 657.328112781048 16416314.0 19972.0 nc|ENSG00000110090|P50416-2|CPT1A;;ENSG00000110090|ENST00000265641|CPT1A 7.048643589019775 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19979 96.529 364.0 312960.0 25 0 30171.0 + 1927 AMIELVERL 9 147 537.3051342646982 1072.5957155961962 2 537.3060180544853 MULTI CID FTMS 0 0 0 19972 152931.234375 0.0529539185081332 7 -0.80596923828125 7 Unmodified _AMIELVERL_ ENSG00000166326|ENST00000299413|TRIM44 43.77239144664712 0.0547478964384323 3 {[DS]|[MA]|[CV]|TT}{I|L}E{I|L}VER{I|L} 9 0 + 80.5 0.0 0.0 7.5051 7.5051 91.278 0.0 0.0 0.0 52.86420374067461 13.46787486224656 13.46787486224656 9.075221787320515 0 1.110924374808178 2.0 0.3807196863200844 0.0 + + {[DS]|[MA]|[CV]|TT}{I|L}E{I|L}VER{I|L};{[DS]|[MA]|[CV]|TT}{I|L}{I|L}EVER{I|L};{[DS]|[MA]|[CV]|TT}{I|L}E{I|L}{I|L}DR{I|L};{[DS]|[MA]|[CV]|TT}{I|L}E{I|L}V[W{I|L}]V;{[DS]|[MA]|[CV]|TT}{I|L}{I|L}E{I|L}DR{I|L};{[DS]|[MA]|[CV]|TT}{I|L}E{I|L}{I|L}WVV;{[DS]|[MA]|[CV]|TT}{I|L}{I|L}EV[W{I|L}]V;{[DS]|[MA]|[CV]|TT}{I|L}{I|L}E{I|L}WVV;{[DS]|[MA]|[CV]|TT}{I|L}{I|L}TAVQQV;{[DS]|[MA]|[CV]|TT}{I|L}{I|L}TVAQQV 7.5051;6.659;6.6155;6.1541;5.7694;5.4344;5.308;4.5883;4.3496;4.0689 +;-;-;-;-;-;-;-;-;- + 1787 + 1 1.565 93539.9 1.0 14138 5839 19972 HBL1_DMSO_200M_050219_1,19979 HBL1_DMSO_200M_050219_1,19979,AMIELVERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19980 96.54 635.0 88658.0 25 0 6786.3 -1 0 69 1139.898486316204 0 1139.898486316204 PEAK CID FTMS 0 0 0 -1 0 8 3 Y 1 -1 3.9794 0.0 0.0 0.17471 0.0 0.0 1139.303177107883 972.4033907526 2111.7065678604827 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.17471 - 4 + 1 1.565 40773.9 1.0 14139 5839 19972 HBL1_DMSO_200M_050219_1,19980 HBL1_DMSO_200M_050219_1,19980, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19981 96.547 404.0 148910.0 25 0 8607.7 + -1 ELTVMMKQFW 10 95 672.8195693067014 1343.6245856802027 2 673.3219482302666 MULTI CID FTMS 0 0 0 19972 145811.984375 1.0 0 0.0 9 2 Oxidation (M) _ELTVM(Oxidation (M))M(Oxidation (M))KQFW_ REV__ENSG00000176438|ENST00000682763|SYNE3;REV__ENST00000555759.1_1_14:95918480-95934190:-|nuORF;REV__nc|ENSG00000176438|Q6ZMZ3-2|SYNE3;REV__nc|ENSG00000176438|Q6ZMZ3-3|SYNE3 10.823927491677226 0.6659270209832991 3 {[TV]|[{I|L}S]}VE{I|L} 5 -1 36.414 0.0 0.0 2.7102 0.0 0.0 0.0 799.2902100300652 799.2902100300652 17.28923316854075 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.7742275032520141 0.0 {[TV]|[{I|L}S]}VE{I|L} 2.7102 - 264 1 1.565 52421.8 1.0 14140 5839 19972 HBL1_DMSO_200M_050219_1,19981 HBL1_DMSO_200M_050219_1,19981,ELTVMMKQFW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19982 96.562 800.0 250460.0 25 0 33100.0 + 15416 IPPGSILL 8 110 809.5134060345256 808.5061295679255 1 809.5142089724541 MULTI CID FTMS 0 0 0 19972 128877.8203125 0.0061858400382532 35 -3.519081115722656 10 Unmodified _IPPGSILL_ ENSG00000172995|ENST00000684406|ARPP21;nc|ENSG00000172995|Q9UBL0-3|ARPP21;nc|ENSG00000172995|Q9UBL0-4|ARPP21;nc|ENSG00000172995|Q9UBL0|ARPP21 78.44472497914707 0.0986812004920242 3 [{I|L}P]PGS{I|L}{I|L}{I|L} 8 0 + 71.139 0.0 0.0 8.7988 8.7988 93.322 0.0 0.0 0.0 25.48455006504028 60.30176209333554 25.48455006504028 9.030899869919438 0 0.4247425010840047 2.0 1.079689690656103 0.0 + + [{I|L}P]PGS{I|L}{I|L}{I|L};[{I|L}P]PSG{I|L}{I|L}{I|L};[{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P]PS{I|L}G{I|L}{I|L};[{I|L}P]VTPG{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L};[{I|L}P]VTGP{I|L}{I|L};[{I|L}P]PS{I|L}{I|L}G{I|L};[{I|L}P]VTP{I|L}G{I|L};[{I|L}P][SG]{I|L}{I|L}P{I|L} 8.7988;7.6819;7.6021;7.2551;7.109;6.9521;6.8857;5.9851;5.839;5.3815 +;-;-;-;-;-;-;-;-;- + 453 1 1.565 138130.4 0.9200000166893004 14141 5839 19972 HBL1_DMSO_200M_050219_1,19982 HBL1_DMSO_200M_050219_1,19982,IPPGSILL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19983 96.576 800.0 88056.0 25 0 6848.1 -1 0 124 644.6346090798976 0 644.6351196169853 PEAK CID FTMS 0 0 0 19972 120583.828125 1.0 0 0.0 11 3 S 1 -1 4.7763 0.0 0.0 0.37105 0.0 0.0 1028.1006868103825 169.09876428775627 1197.1994510981388 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 S 0.37105 - 95 + 1 1.565 64298.0 0.8399999737739563 14142 5839 19972 HBL1_DMSO_200M_050219_1,19983 HBL1_DMSO_200M_050219_1,19983, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19984 96.59 800.0 123230.0 25 0 9266.2 + -1 TMLHLTDIQL 10 128 593.1579546064427 0 593.1581909060478 PEAK CID FTMS 0 0 0 19972 102933.125 1.0 0 0.0 12 2 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))DC(Carbamidomethyl (C))DDNHM(Oxidation (M))C_ ENST00000463237.5_1_3:45730948-45754703:+|nuORF;ENSG00000211456|ENST00000389061|SACM1L;ENST00000445499.2_1_3:45730957-45754662:+|nuORF 0.0 0.3444685223463735 3 Q{I|L}DT{I|L} 5 -1 27.479 0.0 0.0 2.3203 0.0 0.0 131.77225579316024 479.20820213975134 610.9804579329116 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 Q{I|L}DT{I|L} 2.3203 - 294 + 1 1.565 78571.8 0.7900000214576721 14143 5839 19972 HBL1_DMSO_200M_050219_1,19984 HBL1_DMSO_200M_050219_1,19984,CDCDDNHMC False False TMLHLTDIQL 96.590048 593.158190906048 417043.5625 19972.0 ENST00000463237.5_1_3:45730948-45754703:+|nuORF;;ENSG00000211456|ENST00000389061|SACM1L;;ENST00000445499.2_1_3:45730957-45754662:+|nuORF 5.25684928894043 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19985 96.605 800.0 136960.0 25 0 10536.0 -1 0 100 877.7885619997978 0 877.7885619997978 PEAK CID FTMS 0 0 0 -1 0 13 3 W 1 -1 4.6041 0.0 0.0 0.26256 0.0 0.0 1220.2964055692564 344.16233240299067 1564.458737972247 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.26256 - 403 + 1 1.565 76778.3 0.8700000047683716 14144 5839 19972 HBL1_DMSO_200M_050219_1,19985 HBL1_DMSO_200M_050219_1,19985, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19986 96.619 800.0 234480.0 25 0 28495.0 + 1725 ALPQTLPEI 9 190 491.2841498160781 980.5537466989564 2 491.2847167849541 MULTI CID FTMS 0 0 0 19972 96075.7109375 0.6147114472564525 1 -0.134796142578125 14 Unmodified _ALPQTLPEI_ ENSG00000104969|ENST00000221566|SGTA 48.345845343767074 0.0439967357579942 3 [VP]Q{I|L}SV 6 6 36.903 0.0 0.0 3.7635 0.0 0.0 0.0 354.1651350969474 354.1651350969474 13.970996953088388 0.0 0.0 0.0 0 0.4247425010840047 1.0 0.8252574989159953 0.3054621874040891 [VP]Q{I|L}SV 3.7635 - 1654 1 1.565 143432.5 0.5699999928474426 14145 5839 19972 HBL1_DMSO_200M_050219_1,19986 HBL1_DMSO_200M_050219_1,19986,ALPQTLPEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19988 96.623 6.0 11818000.0 25 0 1807600.0 + 1555 ALLDKLYAL 9 82 510.3105462520655 1018.606539570931 2 510.3107787966728 MULTI CID FTMS 0 0 0 19987 10067205.0 0.8405018462778724 2 -0.2172012329101562 1 Unmodified _ALLDKLYAL_ ENSG00000177971|ENST00000403490|IMP3 66.45667989310934 0.0225072657982126 3 [{I|L}A][TA]{I|L}YA{I|L}A{I|L} 10 5 + 79.698 0.0 0.0 7.8242 7.8242 82.975 0.0 0.0 0.0 5.333012287035501 16.53212513775344 5.333012287035501 1.2763625255165325 0 0.8807196863200843 2.0 0.8494850021680094 0.0 [{I|L}A][TA]{I|L}YA{I|L}A{I|L};[{I|L}A][TA]{I|L}AY{I|L}A{I|L};[{I|L}A][TA]{I|L}A{I|L}YA{I|L};[VG]S{I|L}{I|L}YA{I|L}A{I|L};[VG]S{I|L}{I|L}AY{I|L}A{I|L};[{I|L}A]{I|L}[TA]YA{I|L}A{I|L};[{I|L}A][TA]Y{I|L}A{I|L}A{I|L};[{I|L}A]{I|L}[TA]AY{I|L}A{I|L};[VG]S{I|L}{I|L}A{I|L}YA{I|L};[{I|L}A]{I|L}[TA]A{I|L}YA{I|L} 7.8242;7.6989;7.5139;7.3006;7.1753;7.138;7.1117;7.0127;6.9904;6.8277 -;-;-;-;-;-;-;-;-;- 781 1 1.565 57269.4 1.0 14146 5840 19987 HBL1_DMSO_200M_050219_1,19988 HBL1_DMSO_200M_050219_1,19988,ALLDKLYAL True True ALLDKLYAL 96.623233 510.310778796673 228725760.0 19987.0 ENSG00000177971|ENST00000403490|IMP3 4.20810341835022 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19989 96.624 11.0 6030200.0 25 0 1442700.0 + 18668 LAILRLSL 8 70 449.80769777763936 897.6008426220787 2 449.8079406619072 MULTI CID FTMS 0 0 0 19987 6131284.5 0.6094616847200502 2 -0.2172012329101562 2 Unmodified _LAILRLSL_ ENSG00000075240|ENST00000406902|GRAMD4 58.6788170122104 0.1149141431586871 3 [{I|L}A]{I|L}R{I|L}{I|L}S{I|L} 8 2 + 60.768 0.0 0.0 6.77 6.77 94.562 0.0 0.0 0.0 15.278193816289232 30.0667531214534 15.278193816289232 60.76782832741429 0 1.742992819099939 1.6989700043360187 0.3494850021680094 0.0 [{I|L}A]{I|L}R{I|L}{I|L}S{I|L} 6.77 - 58 1 1.565 54445.3 1.0 14147 5840 19987 HBL1_DMSO_200M_050219_1,19989 HBL1_DMSO_200M_050219_1,19989,LAILRLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19990 96.626 43.0 1521800.0 25 0 218000.0 + 17921 KQVEEIFNLKF 11 84 465.5940835327081 1393.7604211983244 3 465.5943481326103 MULTI CID FTMS 0 0 0 19987 990040.8125 0.4555057389056718 -1 0.134796142578125 3 Unmodified _KQVEEIFNLKF_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 90.13494162714682 0.0006528918523104 3 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L}{M(Oxidation (M))|F} 7 6 71.991 0.0 0.0 5.1652 0.0 0.0 0.0 517.2767535559993 517.2767535559993 37.521730711546994 0.0 0.0 0.0 0 1.0 1.5228787452803376 1.1861818737241734 0.9194451763165202 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L}{M(Oxidation (M))|F} 5.1652 - 572 1 1.565 62107.6 1.0 14148 5840 19987 HBL1_DMSO_200M_050219_1,19990 HBL1_DMSO_200M_050219_1,19990,KQVEEIFNLKF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19991 96.627 77.0 792210.0 25 0 171290.0 + 17923 KQVEEIFNLKF 11 76 697.8872565502417 1393.7599601672832 2 697.8884765505791 MULTI CID FTMS 0 0 0 19987 760089.5 0.4314756190342924 -1 0.134796142578125 4 Unmodified _KQVEEIFNLKF_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 115.8214108901486 0.0276667897965723 3 KQVEE{I|L}{M(Oxidation (M))|F}N{I|L}K{M(Oxidation (M))|F} 11 0 + 103.93 0.0 0.0 7.4565 7.4565 91.272 0.0 0.0 0.0 89.70005101880379 5.503673495299253 5.503673495299253 9.128498242811006 0 3.805462187404089 0.0 0.0 0.2742275032520141 + + KQVEE{I|L}{M(Oxidation (M))|F}N{I|L}K{M(Oxidation (M))|F};K[AG]VEE{I|L}{M(Oxidation (M))|F}N{I|L}K{M(Oxidation (M))|F};KQVEE{I|L}{M(Oxidation (M))|F}GG{I|L}K{M(Oxidation (M))|F};K[AG]VEE{I|L}{M(Oxidation (M))|F}GG{I|L}K{M(Oxidation (M))|F};KQVEE{I|L}[RH]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};KQVE[{I|L}V]T[CS]{I|L}K{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L}{M(Oxidation (M))|F}[KA][R{M(Oxidation (M))|F}];K[AG]VEE{I|L}[RH]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};KQA{I|L}[KQ][C(Carbamidomethyl (C))M]{I|L}K{M(Oxidation (M))|F};[RH]{I|L}N{[QG]|[NA]}[WK]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 7.4565;6.8015;6.8015;6.1487;4.1775;3.9113;3.8438;3.5225;2.5767;2.5301 +;-;-;-;-;-;-;-;-;- + 1256 + 1 1.565 52640.6 1.0 14149 5840 19987 HBL1_DMSO_200M_050219_1,19991 HBL1_DMSO_200M_050219_1,19991,KQVEEIFNLKF True True KQVEEIFNLKF 96.627387 697.888476550579 49874645.0 19987.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 7.837148030598958 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19992 96.63 109.0 625320.0 25 0 66381.0 + 41808 VPVTPLAQI 9 79 469.2893981062825 936.5642432793652 2 469.2895385622978 MULTI CID FTMS 0 0 0 19987 488698.21875 1.0 0 0.0 5 Unmodified _VPVTPLAQI_ REV__ENSG00000070423|ENST00000292363|RNF126 30.22481116460888 0.1466181017706357 3 [VP]S{I|L}PQ 6 -1 44.007 0.0 0.0 4.6988 0.0 0.0 0.0 312.1928016355279 312.1928016355279 19.06681865368853 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.416386562212267 0.0 [VP]S{I|L}PQ 4.6988 - 181 1 1.565 58781.5 1.0 14150 5840 19987 HBL1_DMSO_200M_050219_1,19992 HBL1_DMSO_200M_050219_1,19992,VPVTPLAQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19993 96.634 222.0 355320.0 25 0 30425.0 + 1854 ALVESLITV 9 109 472.7867574738796 943.5589620145593 2 472.7864257693291 MULTI CID FTMS 0 0 0 19987 311685.03125 0.5183028777314139 2 -0.2172012329101562 6 Unmodified _ALVESLITV_ ENSG00000196233|ENST00000421806|LCOR 53.57557251787612 0.0325303259649373 3 {[TV]|[{I|L}S]}{I|L}AD{I|L} 6 6 39.372 0.0 0.0 4.1727 0.0 0.0 0.0 328.19095599332803 328.19095599332803 14.123358785552362 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.325257498915995 0.0 {[TV]|[{I|L}S]}{I|L}AD{I|L} 4.1727 - 1100 1 1.565 63702.0 1.0 14151 5840 19987 HBL1_DMSO_200M_050219_1,19993 HBL1_DMSO_200M_050219_1,19993,ALVESLITV True True ALVESLITV 96.633856 472.786425769329 5468280.5 19987.0 ENSG00000196233|ENST00000421806|LCOR 2.597869118054708 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19994 96.646 724.0 552720.0 25 0 82672.0 -1 0 121 856.4903464222052 1710.9661399112103 2 856.9913818240166 MULTI CID FTMS 0 0 0 19987 280430.46875 0.7177239470432175 -1 0.134796142578125 7 3 [VP][YR]P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L} 9 -1 29.009 0.0 0.0 1.6955 0.0 0.0 0.0 609.3560461448027 609.3560461448027 13.681701270857394 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.3807196863200844 1.1382104921644451 [VP][YR]P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L} 1.6955 - 1872 1 1.565 262015.5 1.0 14152 5840 19987 HBL1_DMSO_200M_050219_1,19994 HBL1_DMSO_200M_050219_1,19994, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19995 96.649 139.0 558350.0 25 0 57799.0 + 19493 LFLDINRTL 9 86 552.8236323355472 1103.6327117378944 2 552.8246948122978 MULTI CID FTMS 0 0 0 19987 264291.59375 0.939902912729257 -1 0.134796142578125 8 Unmodified _LFLDINRTL_ ENST00000534275.1_1_11:84473191-84511574:+|nuORF 32.30548876998284 0.1201446275138228 3 {M(Oxidation (M))|F}{I|L}{I|L}ES[KG]PT{I|L} 10 7 + 66.793 0.0 0.0 6.0521 6.0521 91.331 0.0 0.0 0.0 38.55872103607494 8.121126798852515 8.121126798852515 26.977437731477423 0 0.4247425010840047 0.0 1.0941876774005248 0.0 {M(Oxidation (M))|F}{I|L}{I|L}ES[KG]PT{I|L};{M(Oxidation (M))|F}{I|L}V{[ET]|[MV]}[KG]PT{I|L} 6.0521;3.6077 -;- 121 + 1 1.565 67294.6 1.0 14153 5840 19987 HBL1_DMSO_200M_050219_1,19995 HBL1_DMSO_200M_050219_1,19995,LFLDINRTL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 19996 96.654 272.0 399290.0 25 0 33605.0 + 9243 FGYDHLILNV 10 121 595.8143756257824 1189.6141983183647 2 595.8146850466728 MULTI CID FTMS 0 0 0 19987 251379.75 0.6920572190768799 -1 0.134796142578125 9 Unmodified _FGYDHLILNV_ ENSG00000130811|ENST00000253108|EIF3G;ENST00000590158.1_1_19:10225792-10226817:-|nuORF 39.94969957227396 0.1580982266129622 3 {NN|[MP]|[D{I|L}]|[EV]}HYG{M(Oxidation (M))|F}{I|L}{I|L}NV 10 6 + 63.136 0.0 0.0 5.3073 5.3073 77.975 0.0 0.0 0.0 2.9494103390765005 15.026975159433531 2.9494103390765005 2.9494103390765005 0 1.3807196863200843 0.744727494896694 0.4749073637206092 0.0 {NN|[MP]|[D{I|L}]|[EV]}HYG{M(Oxidation (M))|F}{I|L}{I|L}NV;[H{I|L}]DYG{M(Oxidation (M))|F}{I|L}{I|L}NV;{NN|[MP]|[D{I|L}]|[EV]}HYG{I|L}{M(Oxidation (M))|F}{I|L}NV;[H{I|L}]DYG{I|L}{M(Oxidation (M))|F}{I|L}NV;{NN|[MP]|[D{I|L}]|[EV]}HYG{M(Oxidation (M))|F}{I|L}{I|L}GGV;{NN|[MP]|[D{I|L}]|[EV]}H{I|L}[YG]{M(Oxidation (M))|F}{I|L}NV;{NN|[MP]|[D{I|L}]|[EV]}H{I|L}{I|L}YG{M(Oxidation (M))|F}NV;[HD]{I|L}YG{M(Oxidation (M))|F}{I|L}{I|L}NV;[H{I|L}]DYG{M(Oxidation (M))|F}{I|L}{I|L}GGV;[H{I|L}]D{I|L}[YG]{M(Oxidation (M))|F}{I|L}NV 5.3073;5.0593;4.9062;4.6583;4.5369;4.4902;4.3809;4.3368;4.289;4.2423 -;-;-;-;-;-;-;-;-;- 1550 1 1.565 84151.9 1.0 14154 5840 19987 HBL1_DMSO_200M_050219_1,19996 HBL1_DMSO_200M_050219_1,19996,FGYDHLILNV False True FGYDHLILNV 96.654295 595.814685046673 2766722.0 19987.0 ENST00000590158.1_1_19:10225792-10226817:-|nuORF;;ENSG00000130811|ENST00000253108|EIF3G 5.785844802856445 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 19997 96.66 327.0 341930.0 25 0 19220.0 -1 0 105 641.3183309216022 2561.2442178200085 4 641.5690185427666 MULTI CID FTMS 0 0 0 19987 249415.3125 0.1276018985884267 7 -0.8214797973632812 10 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 49.941 0.0 0.0 1.9499 0.0 0.0 0.0 1619.6969041867512 1619.6969041867512 26.28077310822473 0.0 0.0 0.0 0 1.0 0.958607314841775 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.9499 - 539 1 1.565 93416.1 1.0 14155 5840 19987 HBL1_DMSO_200M_050219_1,19997 HBL1_DMSO_200M_050219_1,19997, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 19998 96.664 204.0 465260.0 25 0 60082.0 + 30261 QYGPVAFASI 10 114 526.7731801542996 1051.531807375399 2 526.7736083865166 MULTI CID FTMS 0 0 0 19987 228983.734375 0.6818278210350264 -1 0.134796142578125 11 Unmodified _QYGPVAFASI_ REV__ENST00000485684.5_1_2:206628477-206631981:+|nuORF 52.268347100219714 0.0668375294751462 3 [{M(Oxidation (M))|F}V]NGV[YK][EP] 9 -1 + 30.978 0.0 0.0 2.946 2.946 72.434 0.0 0.0 0.0 3.344537511509312 3.344537511509312 3.344537511509312 3.344537511509312 0 0.2215141619232908 1.3010299956639813 0.0 0.5629529932484498 [{M(Oxidation (M))|F}V]NGV[YK][EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]VG[RD]A;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KS]{M(Oxidation (M))|F}P{[C(Carbamidomethyl (C))G]|[NC]}{I|L};[{M(Oxidation (M))|F}V]NGV{[MS]|[{M(Oxidation (M))|F}A]}[W{I|L}];[{M(Oxidation (M))|F}V]NR[YK][EP];{[VA]|[{I|L}G]}{[MG]|[TS]}S{M(Oxidation (M))|F}[KS][EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YQ]R[RD]A;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]R[RD]A;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]VG{[QD]|[EN]|[WG]|[KD]|[RS]}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YQ]VG{[QD]|[EN]|[WG]|[KD]|[RS]}V 2.946;2.628;2.53;2.4491;2.3554;2.151;2.0374;2.0374;1.8996;1.8996 -;-;-;-;-;-;-;-;-;- 844 1 1.565 79810.9 1.0 14156 5840 19987 HBL1_DMSO_200M_050219_1,19998 HBL1_DMSO_200M_050219_1,19998,QYGPVAFASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 19999 96.667 113.0 427260.0 25 0 60169.0 -1 VGPLPCMLLL 10 83 564.8112442444148 1127.6079355556294 2 564.8092529177666 MULTI CID FTMS 0 0 0 19987 220389.765625 0.0361680480376322 8 -0.9236602783203124 12 Carbamidomethyl (C),Oxidation (M) _VGPLPC(Carbamidomethyl (C))M(Oxidation (M))LLL_ ENST00000438378.2_1_2:132275414-132277996:+|nuORF 12.531546534597751 0.6372748319968624 3 {[QN]|[E{I|L}]|[KN]}[HN]{I|L}{I|L} 6 -1 17.361 0.0 0.0 1.5397 0.0 0.0 0.0 405.1880565988367 405.1880565988367 0.3888758485351076 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[HN]{I|L}{I|L} 1.5397 - 107 1 1.565 41707.8 1.0 14157 5840 19987 HBL1_DMSO_200M_050219_1,19999 HBL1_DMSO_200M_050219_1,19999,VGPLPCMLLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20000 96.68 800.0 152500.0 25 0 9385.8 -1 0 104 771.3662180162245 3081.4357661984977 4 771.8683349490166 MULTI CID FTMS 0 0 0 19987 212197.875 0.1725668952469014 7 -0.8214797973632812 13 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 55.773 0.0 0.0 1.81 0.0 0.0 0.0 2139.8899583759053 2139.8899583759053 38.06454256956867 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.5941876774005248 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.81 - 346 1 1.565 88698.4 0.9300000071525574 14158 5840 19987 HBL1_DMSO_200M_050219_1,20000 HBL1_DMSO_200M_050219_1,20000, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20001 96.695 800.0 347070.0 25 0 46607.0 + 25665 NGFPVFATV 9 186 476.2501236030211 950.4856942728422 2 476.2500488162041 MULTI CID FTMS 0 0 0 19987 187461.125 0.5773516680501919 -1 0.134796142578125 14 Unmodified _NGFPVFATV_ ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF 57.47134341890925 0.0274820932774257 3 [{M(Oxidation (M))|F}V]PATV 6 4 32.426 0.0 0.0 3.4115 0.0 0.0 0.0 333.1190097602884 333.1190097602884 4.344471979274189 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 [{M(Oxidation (M))|F}V]PATV 3.4115 - 942 1 1.565 211774.0 0.7300000190734863 14159 5840 19987 HBL1_DMSO_200M_050219_1,20001 HBL1_DMSO_200M_050219_1,20001,NGFPVFATV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20002 96.697 99.0 568610.0 25 0 74044.0 27128 PFLWPAALL 9 94 514.3046745732624 1026.5947962133248 2 514.3047973513603 MULTI CID FTMS 0 0 0 19987 162096.828125 1.0 0 0.0 15 Unmodified _PFLWPAALL_ ENST00000524522.5_1_11:118402605-118405292:+|nuORF 14.581692164780916 0.4419739649577144 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}]R 5 6 26.21 0.0 0.0 2.5531 0.0 0.0 0.0 354.16467066148647 354.16467066148647 3.0225622685225773 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}]R 2.5531 - 695 1 1.565 47598.6 1.0 14160 5840 19987 HBL1_DMSO_200M_050219_1,20002 HBL1_DMSO_200M_050219_1,20002,PFLWPAALL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20003 96.701 167.0 546190.0 25 0 184000.0 -1 0 93 310.17148224871465 618.3284115642293 2 310.1718322634697 MULTI CID FTMS 0 0 0 19987 170525.109375 0.4316636149051686 -1 0.134796142578125 16 3 C 1 -1 8.9794 0.0 0.0 1.4522 0.0 0.0 357.20891228149185 155.08693872623283 512.2958510077247 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 C 1.4522 - 24 + 1 1.565 77496.9 1.0 14161 5840 19987 HBL1_DMSO_200M_050219_1,20003 HBL1_DMSO_200M_050219_1,20003, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20004 96.715 800.0 357750.0 25 0 68090.0 9420 FKRRRRRSRKW 11 130 816.4997357470685 0 816.5027953982353 PEAK CID FTMS 0 0 0 19987 158640.71875 0.9080828899504002 -1 0.134796142578125 17 Unmodified _FKRRRRRSRKW_ ENST00000403909.2_1_6:139660476-139660551:+|nuORF 1.1933415558491238 0.4761840153648598 3 {I|L}AY{I|L}A{I|L}{I|L}D 8 11 51.336 0.0 0.0 3.1475 0.0 0.0 630.3890433846063 125.07253442935782 755.4615778139641 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7995462078546407 0.0 {I|L}AY{I|L}A{I|L}{I|L}D 3.1475 - 2065 + 1 1.565 192616.1 0.75 14162 5840 19987 HBL1_DMSO_200M_050219_1,20004 HBL1_DMSO_200M_050219_1,20004,FKRRRRRSRKW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20005 96.72 217.0 311750.0 25 0 46190.0 27096 PFHFQRLL 8 117 529.2996534907433 1056.5847540482864 2 529.3014404177666 MULTI CID FTMS 0 0 0 19987 161871.859375 0.1173014982364124 9 -1.0790023803710938 18 Unmodified _PFHFQRLL_ ENSG00000050555|ENST00000361069|LAMC3 15.768221252438446 0.6779680726941459 3 M{I|L} 2 7 16.682 0.0 0.0 1.5789 0.0 0.0 794.448842038324 0.0 794.448842038324 0.0 -1.487847317772367 -1.487847317772367 0.0 0 0.5 0.0 0.0 0.0 M{I|L} 1.5789 - 613 + 1 1.565 58736.7 1.0 14163 5840 19987 HBL1_DMSO_200M_050219_1,20005 HBL1_DMSO_200M_050219_1,20005,PFHFQRLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20006 96.734 800.0 224460.0 25 0 25655.0 + 17197 KLLDLMPRL 9 178 366.8949503709551 0 366.8952514529228 PEAK CID FTMS 0 0 0 19987 142724.9375 0.9562499541995602 -2 0.1949691772460937 19 Unmodified _KLLDLMPRL_ ENSG00000149262|ENST00000534064|INTS4 32.037481411007896 0.1008621704287274 3 {I|L}D 2 7 14.38 0.0 0.0 1.9651 0.0 0.0 149.4004027587244 351.24054895572505 500.64095171444944 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 + {I|L}D 1.9651 + + 72 + 1 1.565 144823.1 0.5600000023841858 14164 5840 19987 HBL1_DMSO_200M_050219_1,20006 HBL1_DMSO_200M_050219_1,20006,KLLDLMPRL True True KLLDLMPRL 96.733718 366.895251452923 1960795.875 19987.0 ENSG00000149262|ENST00000534064|INTS4 2.563093344370524 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20007 96.748 800.0 335020.0 25 0 18887.0 -1 0 123 1086.543627917767 0 1086.543627917767 PEAK CID FTMS 0 0 0 -1 0 20 3 VSY{M(Oxidation (M))|F}{I|L}TD 7 -1 40.685 0.0 0.0 1.874 0.0 0.0 1103.5519031970591 239.1042879693969 1342.656191166456 0.0 0.0 0.0 0.0 0 0.0 0.0 2.329689690656103 0.0 VSY{M(Oxidation (M))|F}{I|L}TD 1.874 - 4870 + 1 1.565 166806.1 0.7900000214576721 14165 5840 19987 HBL1_DMSO_200M_050219_1,20007 HBL1_DMSO_200M_050219_1,20007, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20009 96.752 6.7 7481100.0 25 0 656980.0 + 44569 YPFFRGVTI 9 74 550.3003780171566 1098.5862031011131 2 550.3010131716728 MULTI CID FTMS 0 0 0 20008 6741774.0 0.1818780872021086 4 -0.4956436157226562 1 Unmodified _YPFFRGVTI_ ENSG00000151465|ENST00000281141|CDC123;ENST00000467016.1_1_10:12238244-12240776:+|nuORF 19.62595529434964 0.305431704817896 3 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 7 3 54.953 0.0 0.0 5.0022 0.0 0.0 0.0 128.07212244205314 128.07212244205314 24.50781977329818 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 5.0022 - 74 + 1 1.565 47969.7 1.0 14166 5841 20008 HBL1_DMSO_200M_050219_1,20009 HBL1_DMSO_200M_050219_1,20009,YPFFRGVTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20010 96.753 32.0 2148800.0 25 0 359640.0 + 41326 VPIIWVPLV 9 70 518.3315558659916 1034.6485587987831 2 518.3317748904228 MULTI CID FTMS 0 0 0 20008 1747225.75 0.3714385858245503 3 -0.3876190185546875 2 Unmodified _VPIIWVPLV_ ENSG00000103089|ENST00000219368|FA2H 45.7499826716795 0.0496882803020414 3 VP{I|L}V{M(Oxidation (M))|F} 5 5 55.477 0.0 0.0 5.362 0.0 0.0 0.0 476.3025606744751 476.3025606744751 41.49797211252192 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 0.0 0.0 VP{I|L}V{M(Oxidation (M))|F} 5.362 - 81 + 1 1.565 62053.3 1.0 14167 5841 20008 HBL1_DMSO_200M_050219_1,20010 HBL1_DMSO_200M_050219_1,20010,VPIIWVPLV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20011 96.754 7.7 5401800.0 25 0 916510.0 + 12589 GVIGGGVFQAI 11 80 509.2901828182274 1016.5658127032548 2 509.2903930544853 MULTI CID FTMS 0 0 0 20008 5358442.5 0.8777924082632793 1 -0.0886077880859375 3 Unmodified _GVIGGGVFQAI_ ENSG00000126768|ENST00000696123|TIMM17B;ENST00000464663.1_1_X:48753741-48755032:-|nuORF;ENST00000472645.1_1_X:48751014-48754386:-|nuORF;ENST00000495490.6_1_X:48752719-48755059:-|nuORF;nc|ENSG00000126768|O60830-2|TIMM17B 21.74664581756881 0.5815847713327531 3 [{I|L}A]QAGV 6 8 29.174 0.0 0.0 2.8698 0.0 0.0 0.0 474.23467191639855 474.23467191639855 0.6643834502213473 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A]QAGV 2.8698 - 173 1 1.565 38194.2 1.0 14168 5841 20008 HBL1_DMSO_200M_050219_1,20011 HBL1_DMSO_200M_050219_1,20011,GVIGGGVFQAI False True GVIGGGVFQAI 96.75418 509.290393054485 51401168.0 20008.0 ENST00000464663.1_1_X:48753741-48755032:-|nuORF;;nc|ENSG00000126768|O60830-2|TIMM17B;;ENSG00000126768|ENST00000696123|TIMM17B;;ENST00000472645.1_1_X:48751014-48754386:-|nuORF;;ENST00000495490.6_1_X:48752719-48755059:-|nuORF 1.6830198715130489 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20012 96.755 34.0 2063600.0 25 0 298940.0 + 10621 FVNDIFERI 9 69 576.805936717175 1151.59732050115 2 576.8062621951103 MULTI CID FTMS 0 0 0 20008 1674023.125 0.0476055675847532 5 -0.5425796508789062 4 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 38.61474834105838 0.0830609365873449 3 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L} 9 0 + 74.831 0.0 0.0 6.498 6.498 86.997 0.0 0.0 0.0 12.364167856113111 7.001962355242952 7.001962355242952 7.001962355242952 0 0.9247425010840048 0.0 0.0 0.6989700043360187 + + {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}{I|L}VW;{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VND{I|L}{I|L}{M(Oxidation (M))|F}VW;{M(Oxidation (M))|F}V{I|L}[DN]{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}{I|L}VW;{M(Oxidation (M))|F}VGGD{I|L}{I|L}{M(Oxidation (M))|F}VW;{M(Oxidation (M))|F}V{I|L}[DN]{M(Oxidation (M))|F}{I|L}VW;{M(Oxidation (M))|F}V{I|L}[DN]{I|L}{M(Oxidation (M))|F}VW;{M(Oxidation (M))|F}[DP][KT]{M(Oxidation (M))|F}ER{I|L} 6.498;5.89;5.6984;5.4757;4.7391;4.7215;4.3072;4.1311;3.7167;2.1782 +;-;-;-;-;-;-;-;-;- + 295 + 1 1.565 58880.5 1.0 14169 5841 20008 HBL1_DMSO_200M_050219_1,20012 HBL1_DMSO_200M_050219_1,20012,FVNDIFERI True True FVNDIFERI 96.755357 576.80626219511 1599037056.0 20008.0 ENSG00000277224|ENST00000356530|H2BC7;;ENSG00000274641|ENST00000616182|H2BC17;;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;;ENSG00000273802|ENST00000541790|H2BC8;;ENSG00000274290|ENST00000614097|H2BC6;;nc|ENSG00000203814|Q5QNW6-2|H2BC18;;ENSG00000203814|ENST00000369167|H2BC18;;ENSG00000233822|ENST00000612898|H2BC15;;ENSG00000276410|ENST00000615966|H2BC3;;ENSG00000124635|ENST00000339812|H2BC11;;ENSG00000234289|ENST00000599962|H2BC12L;;ENSG00000275713|ENST00000619466|H2BC9;;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;;ENSG00000196890|ENST00000693095|H2BC26;;ENSG00000158373|ENST00000377777|H2BC5;;ENSG00000273703|ENST00000621112|H2BC14;;ENSG00000278588|ENST00000377733|H2BC10;;ENSG00000180596|ENST00000396984|H2BC4;;ENSG00000197903|ENST00000356950|H2BC12;;ENSG00000185130|ENST00000377401|H2BC13;;ENSG00000184678|ENST00000369155|H2BC21 5.435921986897786 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20013 96.757 36.0 1629300.0 25 0 292160.0 + 15660 IQLPSEKAIFL 11 66 629.8738860896908 1257.7332192461815 2 629.8740722537041 MULTI CID FTMS 0 0 0 20008 1450219.5 0.785783640943643 1 -0.0886077880859375 5 Unmodified _IQLPSEKAIFL_ ENSG00000034713|ENST00000037243|GABARAPL2 49.52724829834842 0.1202481389936634 3 [Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L} 11 5 + 66.987 0.0 0.0 5.326 5.326 84.291 0.0 0.0 0.0 21.47486704509302 7.852135717294473 7.852135717294473 8.578409410397477 0 1.1237125054200234 1.3979400086720375 0.7302046884880937 0.4247425010840047 [Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CP]|[EA]}{I|L}A{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}[AG]{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CP]|[EA]}{I|L}A{I|L}[AG]{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{I|L}PRRC{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{I|L}P{[ES]|[DT]|[{I|L}C]}RR{M(Oxidation (M))|F}{I|L};[Q{I|L}]{I|L}PRR[KA][YN] 5.326;4.644;4.6002;3.9182;3.6186;3.3757;2.1557 -;-;-;-;-;-;- 286 1 1.565 54010.0 1.0 14170 5841 20008 HBL1_DMSO_200M_050219_1,20013 HBL1_DMSO_200M_050219_1,20013,IQLPSEKAIFL True True IQLPSEKAIFL 96.756536 629.874072253704 35048588.0 20008.0 ENSG00000034713|ENST00000037243|GABARAPL2 5.1767276128133135 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20014 96.758 81.0 1013200.0 25 0 51783.0 -1 0 84 791.372936740873 2371.0969808228188 3 791.7081176638603 MULTI CID FTMS 0 0 0 20008 915492.8125 0.951613194524569 5 -0.5425796508789062 6 3 {[HG]|PP}YPPPPPKH 10 -1 42.089 0.0 0.0 1.7751 0.0 0.0 0.0 1260.501235147544 1260.501235147544 13.199309447423316 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[HG]|PP}YPPPPPKH 1.7751 - 2376 1 1.565 66096.9 1.0 14171 5841 20008 HBL1_DMSO_200M_050219_1,20014 HBL1_DMSO_200M_050219_1,20014, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20015 96.76 80.0 1060500.0 25 0 192090.0 + 14105 AIMDIVIKV 9 87 501.3030275794831 1000.591502225766 2 501.3073913455009 MULTI CID FTMS 0 0 0 20008 825738.25 0.0060362592856277 -6 0.7275848388671875 7 Unmodified _IASNGSLLKV_ ENSG00000172071|ENST00000303236|EIF2AK3 25.399314129420983 0.3980215340001851 3 [{I|L}A]MD{I|L}V{I|L}KV 9 5 + 71.903 0.0 0.0 7.1861 7.1861 79.759 0.0 0.0 0.0 27.147642715192497 0.3778856088939903 0.3778856088939903 0.3778856088939903 0 0.6861818737241735 2.0 0.4247425010840047 0.2614393726401688 [{I|L}A]MD{I|L}V{I|L}KV;[{I|L}A]MD{I|L}V{I|L}VK 7.1861;7.1483 -;- 250 + 1 1.565 68282.8 1.0 14172 5841 20008 HBL1_DMSO_200M_050219_1,20015 HBL1_DMSO_200M_050219_1,20015,IASNGSLLKV False True AIMDIVIKV 96.760226 501.307391345501 9890899.0 20008.0 ENSG00000172071|ENST00000303236|EIF2AK3 6.051317532857259 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20016 96.762 69.0 891410.0 25 0 128180.0 + 30051 QVADFLQNI 9 96 524.2769226017718 1046.5392922703436 2 524.2776977419853 MULTI CID FTMS 0 0 0 20008 678851.125 0.9838963957435336 -1 0.1285934448242187 8 Unmodified _QVADFLQNI_ ENSG00000122952|ENST00000373944|ZWINT;ENST00000494312.5_1_10:58119773-58119881:-|nuORF;nc|ENSG00000122952|O95229-2|ZWINT 68.08070601005525 0.0218408846571049 3 {NN|[MP]|[D{I|L}]|[EV]}QG{M(Oxidation (M))|F}{I|L} 6 6 52.467 0.0 0.0 5.0134 0.0 0.0 0.0 370.1723238467686 370.1723238467686 25.466005228622187 0.0 0.0 0.0 0 0.0 0.744727494896694 1.8684151806525389 1.4731975075880328 {NN|[MP]|[D{I|L}]|[EV]}QG{M(Oxidation (M))|F}{I|L} 5.0134 - 475 1 1.565 54790.3 1.0 14173 5841 20008 HBL1_DMSO_200M_050219_1,20016 HBL1_DMSO_200M_050219_1,20016,QVADFLQNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20017 96.764 115.0 687310.0 25 0 49831.0 + 9964 FPGLAIKI 8 95 429.776080166156 857.537607399112 2 429.7759887576103 MULTI CID FTMS 0 0 0 20008 518180.125 0.0469360613391438 8 -0.950408935546875 9 Unmodified _FPGLAIKI_ ENSG00000142945|ENST00000372224|KIF2C;ENST00000455186.5_1_1:45205634-45205691:+|nuORF;ENST00000493027.5_1_1:45205556-45221765:+|nuORF 46.92087301778293 0.1537303740847981 3 {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L} 8 0 + 38.622 0.0 0.0 4.5039 4.5039 73.853 0.0 0.0 0.0 -0.4828114958861533 12.914930551903224 -0.4828114958861533 1.8242588296229911 0 0.7302046884880938 0.0 0.0 0.2215141619232908 + + {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L};{M(Oxidation (M))|F}P[Q{I|L}]{I|L}K{I|L};{M(Oxidation (M))|F}{I|L}[PG]A{I|L}K{I|L};{M(Oxidation (M))|F}{I|L}[QP]{I|L}K{I|L} 4.5039;4.2911;3.4753;3.4299 +;-;-;- + 120 + 1 1.565 64920.3 1.0 14174 5841 20008 HBL1_DMSO_200M_050219_1,20017 HBL1_DMSO_200M_050219_1,20017,FPGLAIKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20018 96.766 75.0 839900.0 25 0 61041.0 27125 PFLWGPRV 8 97 486.276888480758 970.539224028316 2 486.2765380740166 MULTI CID FTMS 0 0 0 20008 496449.59375 0.2003618962778746 5 -0.5425796508789062 10 Unmodified _PFLWGPRV_ nc|ENSG00000166473|Q7Z442-6|PKD1L2 22.4526382665184 0.5719518724627818 3 WP{M(Oxidation (M))|F}{I|L} 4 6 45.65 0.0 0.0 4.7035 0.0 0.0 0.0 424.2316816965835 424.2316816965835 30.243500300354142 0.0 0.0 0.0 0 0.2742275032520141 1.0969100130080565 0.0 0.0 WP{M(Oxidation (M))|F}{I|L} 4.7035 - 212 + 1 1.565 53696.0 1.0 14175 5841 20008 HBL1_DMSO_200M_050219_1,20018 HBL1_DMSO_200M_050219_1,20018,PFLWGPRV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 20019 96.769 123.0 1198500.0 25 0 417700.0 -1 0 77 326.17126285580065 650.3279727784013 2 326.1710388064384 MULTI CID FTMS 0 0 0 20008 385589.84375 1.0 0 0.0 11 3 G 1 -1 12.474 0.0 0.0 1.9181 0.0 0.0 575.2953169940248 0.0 575.2953169940248 0.0 12.474250108400469 0.0 0.0 0 0.0 0.0 0.0 0.0 G 1.9181 - 3 + 1 1.565 122049.9 1.0 14176 5841 20008 HBL1_DMSO_200M_050219_1,20019 HBL1_DMSO_200M_050219_1,20019, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20020 96.771 113.0 677770.0 25 0 98443.0 + 44272 YLLDQHILI 9 93 564.327708127629 1126.6408633220578 2 564.3289672732353 MULTI CID FTMS 0 0 0 20008 350225.71875 0.7989612640888352 -1 0.1285934448242187 12 Unmodified _YLLDQHILI_ ENSG00000168918|ENST00000445964|INPP5D;nc|ENSG00000168918|Q92835-2|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D 23.78978130925829 0.2284941198415988 3 Y{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[H{I|L}]{I|L}{I|L} 9 0 + 48.579 0.0 0.0 4.3118 4.3118 85.865 0.0 0.0 0.0 15.554301197933988 1.628487329057151 1.628487329057151 34.987737688117235 0 0.4247425010840047 2.0 0.5 0.0 + + Y{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[H{I|L}]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HN]{I|L}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{I|L}[HN]{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[H{I|L}]G{I|L}[W{I|L}]{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 4.3118;1.2063;0.67196;0.60168 +;-;-;- + 371 + 1 1.565 63673.2 1.0 14177 5841 20008 HBL1_DMSO_200M_050219_1,20020 HBL1_DMSO_200M_050219_1,20020,YLLDQHILI False True YLLDQHILI 96.770909 564.328967273235 9897524.0 20008.0 nc|ENSG00000168918|Q92835-2|INPP5D;;nc|ENSG00000168918|Q92835-3|INPP5D;;ENSG00000168918|ENST00000445964|INPP5D 2.616461714108785 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20021 96.775 201.0 373790.0 25 0 79637.0 -1 LFCDDLVCCLV 11 75 650.2906981757827 1298.5668434183654 2 650.2910034060478 MULTI CID FTMS 0 0 0 20008 343877.96875 0.6715364846698894 -2 0.2633895874023437 13 Carbamidomethyl (C) _LFC(Carbamidomethyl (C))DDLVCCLV_ ENST00000595753.5_1_19:16663592-16663826:-|nuORF 14.838274106304384 0.7264935675211688 3 Y{M(Oxidation (M))|F}{I|L}V 4 -1 21.37 0.0 0.0 1.6457 0.0 0.0 758.2718373029312 0.0 758.2718373029312 0.0 7.390690719683093 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.0 Y{M(Oxidation (M))|F}{I|L}V 1.6457 - 98 1 1.565 68637.7 1.0 14178 5841 20008 HBL1_DMSO_200M_050219_1,20021 HBL1_DMSO_200M_050219_1,20021,LFCDDLVCCLV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20022 96.785 602.0 558210.0 25 0 24789.0 + 30052 QVADFLQNI 9 141 1047.5477197773955 1046.5404433107956 1 1047.546801745892 MULTI CID FTMS 0 0 0 20008 293665.46875 0.7680371712763933 -1 0.1285934448242187 14 Unmodified _QVADFLQNI_ ENSG00000122952|ENST00000373944|ZWINT;ENST00000494312.5_1_10:58119773-58119881:-|nuORF;nc|ENSG00000122952|O95229-2|ZWINT 145.12958885780327 0.0339783901353921 3 {[QV]|[N{I|L}]|[RA]|[KV]}EG{M(Oxidation (M))|F}{I|L}GAN{I|L} 10 4 + 113.44 0.0 0.0 10.839 10.839 86.666 0.0 0.0 0.0 14.463950151760656 11.518637558036689 11.518637558036689 2.042425094393252 0 2.059894379144197 1.3979400086720375 1.8631178558850543 2.6861818737241734 {[QV]|[N{I|L}]|[RA]|[KV]}EG{M(Oxidation (M))|F}{I|L}GAN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EG{M(Oxidation (M))|F}{I|L}QN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AD{M(Oxidation (M))|F}{I|L}GAN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AD{M(Oxidation (M))|F}{I|L}QN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EG{M(Oxidation (M))|F}{I|L}GAGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}E{M(Oxidation (M))|F}G{I|L}GAN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EG{M(Oxidation (M))|F}{I|L}QGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AD{M(Oxidation (M))|F}{I|L}GAGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}E{M(Oxidation (M))|F}G{I|L}QN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AD{M(Oxidation (M))|F}{I|L}QGG{I|L} 10.839;10.644;10.631;10.436;9.9635;9.9392;9.7641;9.7553;9.7441;9.5559 -;-;-;+;-;-;-;-;-;- + 25482 1 1.565 206571.4 1.0 14179 5841 20008 HBL1_DMSO_200M_050219_1,20022 HBL1_DMSO_200M_050219_1,20022,QVADFLQNI True True QVADFLQNI 96.785322 1047.54680174589 11501552.75 20008.0 nc|ENSG00000122952|O95229-2|ZWINT;;ENST00000494312.5_1_10:58119773-58119881:-|nuORF;;ENSG00000122952|ENST00000373944|ZWINT 8.949360847473145 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20023 96.787 79.0 547050.0 25 0 56533.0 + -1 DLLVKTQCL 9 75 545.3003992159358 1088.5862454986716 2 545.3008300662041 MULTI CID FTMS 0 0 0 20008 297511.1875 0.3261751319178048 8 -0.950408935546875 15 Carbamidomethyl (C) _DLLVKTQC(Carbamidomethyl (C))L_ REV__ENSG00000005156|ENST00000378526|LIG3;REV__nc|ENSG00000005156|P49916-3|LIG3 20.453626601364224 0.2830276176381075 3 {NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TVE{I|L} 9 -1 + 49.587 0.0 0.0 4.5552 4.5552 73.575 0.0 0.0 0.0 1.706962271689747 13.010299956639804 1.706962271689747 1.706962271689747 0 0.3494850021680094 1.2218487496163564 0.5 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[CA]|SS}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}VV{[MG]|[TS]}TVE{I|L};{[QN]|[E{I|L}]|[KN]}VVV[CS]VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[WT]|[RM]}TVE{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[WT]|[RM]}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}VV[DG][{M(Oxidation (M))|F}V]{I|L};[R{M(Oxidation (M))|F}][DP]{I|L}TVE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))Q]{I|L}TVE{I|L} 4.5552;4.3984;4.3984;4.3503;4.2787;4.0749;3.7983;3.4784;3.36;3.2985 -;-;-;-;-;-;-;-;-;- 340 1 1.565 40585.7 1.0 14180 5841 20008 HBL1_DMSO_200M_050219_1,20023 HBL1_DMSO_200M_050219_1,20023,DLLVKTQCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20024 96.8 725.0 297810.0 25 0 74384.0 -1 0 144 618.7059868920092 1853.096131276228 3 618.7056762576103 MULTI CID FTMS 0 0 0 20008 279981.6875 1.0 0 0.0 16 3 {I|L}A{I|L}{I|L} 4 -1 14.412 0.0 0.0 0.77775 0.0 0.0 1070.6782138430162 369.1065321358136 1439.78474597883 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A{I|L}{I|L} 0.77775 - 554 + 1 1.565 167968.0 1.0 14181 5841 20008 HBL1_DMSO_200M_050219_1,20024 HBL1_DMSO_200M_050219_1,20024, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20025 96.812 732.0 565790.0 25 0 31116.0 + 23454 LTGGLEGIL 9 133 872.5095408300111 871.5022643634111 1 872.5098754763603 MULTI CID FTMS 0 0 0 20008 209336.96875 0.6331866531007774 -1 0.1285934448242187 17 Unmodified _LTGGLEGIL_ ENST00000486390.1_1_1:16767296-16767698:+|nuORF 67.34385681178166 0.0221257235307089 3 {[DA]|[EG]}AVAS{I|L}{I|L}{I|L} 9 7 + 64.371 0.0 0.0 7.3862 7.3862 80.401 0.0 0.0 0.0 0.4095860767890613 16.478174818886373 0.4095860767890613 0.4095860767890613 0 0.4247425010840047 0.8860566476931632 1.589136830878453 0.0 {[DA]|[EG]}AVAS{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}ADAS{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}TGDA{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}TG{I|L}DA{I|L}{I|L};{[VA]|[{I|L}G]}DAAS{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAS{I|L}{I|L}{I|L};{[DA]|[EG]}AVSA{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}ADSA{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}AGDA{I|L}{I|L}{I|L};{[DA]|[EG]}AVATV{I|L}{I|L} 7.3862;7.3392;7.0576;7.0143;6.9938;6.9413;6.9377;6.8907;6.8556;6.8498 -;-;-;-;-;-;-;-;-;- 6115 1 1.565 268234.9 1.0 14182 5841 20008 HBL1_DMSO_200M_050219_1,20025 HBL1_DMSO_200M_050219_1,20025,LTGGLEGIL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20026 96.825 734.0 173740.0 25 0 29911.0 -1 0 94 1166.272753894329 0 1166.272753894329 PEAK CID FTMS 0 0 0 -1 0 18 3 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.17075 0.0 0.0 1665.6928944079957 514.7791842096311 2180.4720786176267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.17075 - 38 + 1 1.565 78569.6 1.0 14183 5841 20008 HBL1_DMSO_200M_050219_1,20026 HBL1_DMSO_200M_050219_1,20026, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20027 96.829 110.0 1100000.0 25 0 84644.0 16695 KERKAFKTIE 10 51 625.3667172400179 1248.7188815468355 2 625.3680908083916 MULTI CID FTMS 0 0 0 20008 200437.046875 0.3794756964021907 -1 0.1285934448242187 19 Unmodified _KERKAFKTIE_ ENSG00000066933|ENST00000356056|MYO9A;ENST00000563542.5_1_15:72185266-72338904:-|nuORF;nc|ENSG00000066933|B2RTY4-2|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A;nc|ENSG00000066933|B2RTY4-5|MYO9A 8.155526934196011 0.6889124077178598 3 MN 2 10 9.2525 0.0 0.0 0.74096 0.0 0.0 481.33575591708205 519.2800387018186 1000.6157946189008 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 MN 0.74096 - 6 + 1 1.565 94542.2 1.0 14184 5841 20008 HBL1_DMSO_200M_050219_1,20027 HBL1_DMSO_200M_050219_1,20027,KERKAFKTIE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20028 96.836 397.0 246400.0 25 0 29514.0 + 36356 SYPLFSQEF 9 131 559.2630461550225 1116.511539376845 2 559.2623779177666 MULTI CID FTMS 0 0 0 20008 176728.625 0.7581297160523824 -3 0.3235626220703125 20 Unmodified _SYPLFSQEF_ ENSG00000065308|ENST00000182527|TRAM2 26.88365393820708 0.1891292719743517 3 [{I|L}P]{M(Oxidation (M))|F}S{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V] 9 6 + 34.388 0.0 0.0 3.08 3.08 71.514 0.0 0.0 0.0 7.130091858003191 0.7378621416091917 0.7378621416091917 2.8380967331202847 0 0.0 1.2218487496163564 0.3807196863200844 0.0 [{I|L}P]{M(Oxidation (M))|F}S{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V];[{I|L}P]{M(Oxidation (M))|F}NS{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V];[{I|L}P]{M(Oxidation (M))|F}GGS{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V];[YT]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F};[{I|L}P]{M(Oxidation (M))|F}NR[HC][KC];[{M(Oxidation (M))|F}E]K{M(Oxidation (M))|F}[PG]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V];[TA][KG]S{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V];[YT]{M(Oxidation (M))|F}[PG]K[NS]G{M(Oxidation (M))|F};[AG][KT]S{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V];[{M(Oxidation (M))|F}E]K[PG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V] 3.08;2.8258;2.001;1.4666;1.3451;1.2173;1.1751;1.1054;1.0751;1.0186 -;-;-;-;-;-;-;-;-;- 1516 1 1.565 81175.7 1.0 14185 5841 20008 HBL1_DMSO_200M_050219_1,20028 HBL1_DMSO_200M_050219_1,20028,SYPLFSQEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20030 96.841 85.0 707020.0 25 0 38906.0 + 4191 DAPIVAHLWEY 11 84 657.3295540620028 1312.6445551908057 2 657.3298217654228 MULTI CID FTMS 0 0 0 20029 506641.78125 0.5649657365833097 1 -0.1425857543945312 1 Unmodified _DAPIVAHLWEY_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 45.739877483867886 0.1412225664835785 3 [{I|L}P]V[HA]W{I|L}EGEY 11 5 + 57.668 0.0 0.0 4.3933 4.3933 72.431 0.0 0.0 0.0 1.706962271689747 16.575773191777934 1.706962271689747 1.249387366082999 0 0.0 2.0 0.0 0.0 [{I|L}P]V[HA]W{I|L}EGEY;[{I|L}P]V[HA]{I|L}WEGEY;[H{I|L}]G{I|L}PW{I|L}EGEY;[H{I|L}]G{I|L}P{I|L}WEGEY;[HA]V{I|L}PW{I|L}EGEY;{[DA]|[EG]}P{I|L}[{I|L}P]P{I|L}EGEY;[HA]V{I|L}P{I|L}WEGEY;[H{I|L}]G{I|L}WP{I|L}EGEY;[H{I|L}]AVPW{I|L}EGEY;[H{I|L}]AVP{I|L}WEGEY 4.3933;4.2981;4.2632;4.1681;4.0688;4.0433;3.9736;3.8046;3.7656;3.6704 -;-;-;-;-;-;-;-;-;- 1376 1 1.56 49603.6 1.0 14186 5842 20029 HBL1_DMSO_200M_050219_1,20030 HBL1_DMSO_200M_050219_1,20030,DAPIVAHLWEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20031 96.849 464.0 280990.0 25 0 42663.0 + 43926 YGIENEVFL 9 149 542.2716095089415 1082.528666084683 2 542.2716552615166 MULTI CID FTMS 0 0 0 20029 170714.09375 0.2163858248248169 2 -0.29901123046875 2 Unmodified _YGIENEVFL_ ENSG00000111716|ENST00000350669|LDHB;ENST00000542765.4_1_12:21788478-21790169:-|nuORF 54.773552608820026 0.0299037012502309 3 [{M(Oxidation (M))|F}V]SENEV{M(Oxidation (M))|F}{I|L} 9 3 + 48.347 0.0 0.0 4.4661 4.4661 77.482 0.0 0.0 0.0 4.357959558990956 5.515063726617697 4.357959558990956 4.357959558990956 0 0.7742275032520141 1.0 0.9361818737241736 1.048455006504028 [{M(Oxidation (M))|F}V]SENEV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}YENEV{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[YG]NEV{M(Oxidation (M))|F}{I|L};[YG]{I|L}ENEV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}C{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V{M(Oxidation (M))|F}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}A{I|L}NEV{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]SEND{I|L}{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}CS{[CA]|SS}V{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}N[WY]{I|L}{M(Oxidation (M))|F}{I|L};[YG]E{I|L}NEV{M(Oxidation (M))|F}{I|L} 4.4661;4.0635;3.6215;3.3074;3.2845;3.2602;3.2195;3.1072;3.0454;2.9821 -;-;-;+;-;-;-;-;-;- + 1143 1 1.56 103939.9 1.0 14187 5842 20029 HBL1_DMSO_200M_050219_1,20031 HBL1_DMSO_200M_050219_1,20031,YGIENEVFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20032 96.852 123.0 1375200.0 25 0 228260.0 -1 0 96 938.5511644707776 1875.087776008356 2 939.0517455935478 MULTI CID FTMS 0 0 0 20029 923900.75 1.0 0 0.0 3 3 [QP]S{I|L}Y 5 -1 22.536 0.0 0.0 1.2019 0.0 0.0 0.0 1283.773664030093 1283.773664030093 11.52249673628745 0.0 0.0 0.0 0 0.0 0.0 1.1989700043360187 0.0 [QP]S{I|L}Y 1.2019 - 309 1 1.56 116396.2 1.0 14188 5842 20029 HBL1_DMSO_200M_050219_1,20032 HBL1_DMSO_200M_050219_1,20032, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20033 96.854 96.0 1522200.0 25 0 125950.0 + 44783 YPLTNLVL 8 85 932.5486975384666 931.5414210718666 1 932.5515624880792 MULTI CID FTMS 0 0 0 20029 650776.875 1.0 0 0.0 4 Unmodified _YPLTNLVL_ ENST00000360472.8_1_1:160183272-160183497:+|nuORF 85.35673624503755 0.0684052510377227 3 [{I|L}P]Y{I|L}TNV{I|L} 8 3 + 72.675 0.0 0.0 7.8016 7.8016 84.701 0.0 0.0 0.0 10.969100130080562 16.40978057358332 10.969100130080562 2.3860585694618663 0 0.3807196863200844 1.3979400086720375 0.8481362441963329 0.7302046884880937 [{I|L}P]Y{I|L}TNV{I|L};[{I|L}P]YT{I|L}NV{I|L};[{I|L}P]YTNV{I|L}{I|L};[{I|L}P]YTN{I|L}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}TNV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}T{I|L}NV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TNV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TN{I|L}V{I|L};[{I|L}P]Y{I|L}[NS]{I|L}{I|L};[{I|L}P]Y{I|L}TGGV{I|L} 7.8016;7.5455;7.3564;7.3489;6.6241;6.3679;6.1789;6.1714;6.1619;6.0235 -;-;-;-;-;-;-;+;-;- + 703 1 1.56 99416.6 1.0 14189 5842 20029 HBL1_DMSO_200M_050219_1,20033 HBL1_DMSO_200M_050219_1,20033,YPLTNLVL True True IPYITNVL 96.853871 932.551562488079 5904077.5 20029.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 2.467500309149424 1.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20034 96.857 160.0 1122200.0 25 0 143860.0 -1 0 91 946.5371864426456 1891.059819952092 2 946.537646472454 MULTI CID FTMS 0 0 0 20029 464666.71875 1.0 0 0.0 5 3 [{I|L}T]{[DA]|[EG]}{I|L}H 6 -1 27.055 0.0 0.0 1.4307 0.0 0.0 0.0 1237.6952929347665 1237.6952929347665 21.49552157685392 0.0 0.0 0.0 0 0.0 2.0 0.6307196863200843 0.0 [{I|L}T]{[DA]|[EG]}{I|L}H 1.4307 - 144 1 1.56 118616.5 1.0 14190 5842 20029 HBL1_DMSO_200M_050219_1,20034 HBL1_DMSO_200M_050219_1,20034, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20035 96.869 688.0 516700.0 25 0 130250.0 + 18873 LASVAWLFLML 11 112 632.3617736409462 1262.7089943486924 2 632.3616821169853 MULTI CID FTMS 0 0 0 20029 344947.71875 1.0 0 0.0 6 Unmodified _LASVAWLFLML_ REV__ENSG00000177291|ENST00000321660|GJD4 10.073929032068715 0.8255972128077141 3 {I|L} 1 -1 12.764 0.0 0.0 1.0109 0.0 0.0 1131.6141132225189 0.0 1131.6141132225189 0.0 2.16827780469286 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0109 + + 70 + 1 1.56 256962.3 1.0 14191 5842 20029 HBL1_DMSO_200M_050219_1,20035 HBL1_DMSO_200M_050219_1,20035,LASVAWLFLML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20036 96.873 183.0 617570.0 25 0 59314.0 + 45205 YQVDLLVKI 9 123 545.8285496824471 1089.6425464316942 2 545.8293334841728 MULTI CID FTMS 0 0 0 20029 300714.4375 1.0 0 0.0 7 Unmodified _YQVDLLVKI_ ENSG00000184445|ENST00000333479|KNTC1 63.960520009940105 0.0238892913700936 3 YQVD{I|L}{I|L}VK{I|L} 9 0 + 66.349 0.0 0.0 6.089 6.089 84.217 0.0 0.0 0.0 22.67606240177031 5.563025007672877 5.563025007672877 5.563025007672877 0 0.9876954943324544 0.9208187539523752 0.6861818737241735 0.5610312860818771 + + YQVD{I|L}{I|L}VK{I|L};YQVD{I|L}{I|L}V{I|L}K;Y[AG]VD{I|L}{I|L}VK{I|L};Y[AG]VD{I|L}{I|L}V{I|L}K;{NN|[MP]|[D{I|L}]|[EV]}{I|L}VQV[K{I|L}]Y;{[QN]|[E{I|L}]|[KN]}VVQV[K{I|L}]Y;{NN|[MP]|[D{I|L}]|[EV]}{I|L}VVQ[K{I|L}]Y;{NN|[MP]|[D{I|L}]|[EV]}V{I|L}QV[K{I|L}]Y;{NN|[MP]|[D{I|L}]|[EV]}{I|L}VV[K{I|L}]QY;{[QN]|[E{I|L}]|[KN]}VVVQ[K{I|L}]Y 6.089;5.5785;4.3989;3.8884;2.8937;2.7698;2.4349;2.3412;2.3347;2.3109 +;-;-;-;-;-;-;-;-;- + 1336 + 1 1.56 88782.9 1.0 14192 5842 20029 HBL1_DMSO_200M_050219_1,20036 HBL1_DMSO_200M_050219_1,20036,YQVDLLVKI True True YQVDLLVKI 96.872546 545.829333484173 3699639.75 20029.0 ENSG00000184445|ENST00000333479|KNTC1 1.0079916218916576 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20037 96.879 385.0 445300.0 25 0 58531.0 + 22473 LPVLPLRI 8 97 460.8189768836969 919.6234008341938 2 460.8183166384697 MULTI CID FTMS 0 0 0 20029 220122.984375 0.3494848771984035 -2 0.2172012329101562 8 Unmodified _LPVLPLRI_ REV__ENST00000547077.1_1_10:102989368-102992212:+|nuORF 59.79521254764295 0.1151759508933577 3 {I|L}PPV{I|L}{I|L}R{I|L} 8 -1 + 78.78 0.0 0.0 8.5665 8.5665 94.91 0.0 0.0 0.0 30.40154208078032 17.276848397738817 17.276848397738817 9.98773768811722 0 0.4247425010840047 2.0 0.0 0.8851518780601922 {I|L}PPV{I|L}{I|L}R{I|L};{I|L}P{I|L}VP{I|L}R{I|L};[{I|L}P]V{I|L}R{I|L}{I|L}P;[{I|L}P]V{I|L}[VG]{I|L}{I|L}P;{I|L}{I|L}PVP{I|L}R{I|L};[VP]{I|L}{I|L}R{I|L}{I|L}P;[VP]{I|L}{I|L}[VG]{I|L}{I|L}P 8.5665;7.4805;5.6411;4.3018;4.1364;4.0598;2.7204 -;-;-;-;-;-;- 180 + 1 1.56 134589.9 1.0 14193 5842 20029 HBL1_DMSO_200M_050219_1,20037 HBL1_DMSO_200M_050219_1,20037,LPVLPLRI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20038 96.893 781.0 328540.0 25 0 61773.0 -1 0 126 1168.1753873528064 3501.504332658619 3 1168.844653308392 MULTI CID FTMS 0 0 0 20029 143105.625 0.0840759764910837 -2 0.2172012329101562 9 3 {M(Oxidation (M))|F}C(Carbamidomethyl (C)) 2 -1 9.464 0.0 0.0 0.27028 0.0 0.0 1311.4593337693211 1879.917948024405 3191.377281793726 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C)) 0.27028 - 50 + 1 1.56 187622.1 1.0 14194 5842 20029 HBL1_DMSO_200M_050219_1,20038 HBL1_DMSO_200M_050219_1,20038, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20039 96.907 800.0 241830.0 25 0 53579.0 -1 LGGGEPCF 8 145 411.1777975909994 820.3410422487989 2 411.1779662966728 MULTI CID FTMS 0 0 0 20029 134983.375 0.1978284553758535 -2 0.2172012329101562 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LGGGEPCF_ ENST00000263367.7_2_19:41771119-41771188:+|nuORF 2.577480529830294 0.808687252328423 3 {I|L} 1 -1 11.237 0.0 0.0 1.3698 0.0 0.0 155.09402994403928 549.1403902643186 704.234420208358 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.3698 + + 34 + 1 1.56 155173.1 0.5699999928474426 14195 5842 20029 HBL1_DMSO_200M_050219_1,20039 HBL1_DMSO_200M_050219_1,20039,LGGGEPCF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20040 96.921 800.0 128050.0 25 0 22039.0 -1 0 104 1165.629565417767 0 1165.629565417767 PEAK CID FTMS 0 0 0 -1 0 11 3 Q 1 -1 4.6041 0.0 0.0 0.19766 0.0 0.0 1678.9069447009654 519.2613009088499 2198.168245609815 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.19766 - 9 + 1 1.56 65810.9 1.0 14196 5842 20029 HBL1_DMSO_200M_050219_1,20040 HBL1_DMSO_200M_050219_1,20040, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20041 96.936 800.0 104280.0 25 0 16199.0 -1 0 79 1076.595874011517 0 1076.595874011517 PEAK CID FTMS 0 0 0 -1 0 12 3 {I|L} 1 -1 4.6041 0.0 0.0 0.21403 0.0 0.0 1609.9010853259654 425.1689852350219 2035.0700705609872 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.21403 - 22 + 1 1.56 58445.4 0.9399999976158142 14197 5842 20029 HBL1_DMSO_200M_050219_1,20041 HBL1_DMSO_200M_050219_1,20041, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20042 96.95 800.0 148580.0 25 0 10526.0 + 34314 SLRRRRRRRRR 11 134 812.5243422483079 0 812.3563720583916 PEAK CID FTMS 0 0 0 -1 0 13 Unmodified _SLRRRRRRRRR_ REV__ENST00000373930.3_1_9:123476433-123476640:-|nuORF 0.3070304955306653 0.4761840153648598 3 AVV{I|L}N 5 -1 21.938 0.0 0.0 1.3517 0.0 0.0 928.5959292967912 195.1145113580688 1123.71044065486 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AVV{I|L}N 1.3517 - 4824 + 1 1.56 85586.3 0.7300000190734863 14198 5842 20029 HBL1_DMSO_200M_050219_1,20042 HBL1_DMSO_200M_050219_1,20042,SLRRRRRRRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20043 96.965 800.0 141020.0 25 0 21060.0 -1 0 108 1110.553393542767 0 1110.553393542767 PEAK CID FTMS 0 0 0 -1 0 14 3 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.20748 0.0 0.0 1294.6357044665904 774.3660982721311 2069.0018027387214 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20748 - 80 + 1 1.56 75347.1 0.8600000143051147 14199 5842 20029 HBL1_DMSO_200M_050219_1,20043 HBL1_DMSO_200M_050219_1,20043, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20044 96.979 800.0 179530.0 25 0 14125.0 + 21048 LPAEFLYRI 9 158 561.3220005852089 1120.6294482372175 2 561.3218261599541 MULTI CID FTMS 0 0 0 20029 102071.71875 1.0 0 0.0 15 Unmodified _LPAEFLYRI_ ENSG00000182919|ENST00000354421|C11orf54;nc|nan|Q9H0W9-2|C11orf54;nc|nan|Q9H0W9-3|C11orf54;nc|nan|Q9H0W9-4|C11orf54 72.96794272382148 0.0199516581995792 3 {I|L}PAE{M(Oxidation (M))|F}{I|L}YR{I|L} 9 0 + 99.44 0.0 0.0 8.8736 8.8736 92.545 0.0 0.0 0.0 24.72016505986112 7.767251952149223 7.767251952149223 7.767251952149223 0 1.8169015600442573 1.3979400086720375 0.9947026752325154 0.0 + + {I|L}PAE{M(Oxidation (M))|F}{I|L}YR{I|L};{I|L}PAE{M(Oxidation (M))|F}{I|L}HVPV;{I|L}PAE{I|L}{M(Oxidation (M))|F}YR{I|L};{I|L}PAE{M(Oxidation (M))|F}{I|L}HVVP;{I|L}PA{I|L}E{M(Oxidation (M))|F}YR{I|L};{I|L}PAE{I|L}{M(Oxidation (M))|F}HVPV;{I|L}PA{I|L}E{M(Oxidation (M))|F}HVPV;{I|L}PAE{I|L}{M(Oxidation (M))|F}HVVP;{I|L}P{I|L}AE{M(Oxidation (M))|F}YR{I|L};{I|L}{I|L}PAE{M(Oxidation (M))|F}YR{I|L} 8.8736;8.1804;7.7318;7.5198;7.1513;7.0387;6.4582;6.378;6.2853;5.9888 +;-;-;-;-;-;-;-;-;- + 2306 + 1 1.56 113603.5 0.7200000286102295 14200 5842 20029 HBL1_DMSO_200M_050219_1,20044 HBL1_DMSO_200M_050219_1,20044,LPAEFLYRI True True LPAEFLYRI 96.978691 561.321826159954 585311.875 20029.0 ENSG00000182919|ENST00000354421|C11orf54;;nc|nan|Q9H0W9-2|C11orf54;;nc|nan|Q9H0W9-4|C11orf54;;nc|nan|Q9H0W9-3|C11orf54 4.760685920715332 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20046 96.984 88.0 570850.0 25 0 141650.0 18669 LAILRLSL 8 55 449.80769777763936 897.6008426220787 2 449.8079406619072 MULTI CID FTMS 0 0 0 20045 617613.0625 0.0613919477356432 5 -0.563873291015625 1 Unmodified _LAILRLSL_ ENSG00000075240|ENST00000406902|GRAMD4 49.93300154707207 0.1395624531867191 3 [{I|L}A]{I|L}R{I|L}{I|L}S{I|L} 8 2 + 59.319 0.0 0.0 6.6086 6.6086 92.731 0.0 0.0 0.0 13.829628067253168 25.647124887093824 13.829628067253168 21.989700043360187 0 1.742992819099939 1.6989700043360187 0.3807196863200844 0.0 [{I|L}A]{I|L}R{I|L}{I|L}S{I|L};[{I|L}A]{I|L}RS{I|L}{I|L}{I|L} 6.6086;4.1588 -;- 40 1 1.556 44755.1 1.0 14201 5843 20045 HBL1_DMSO_200M_050219_1,20046 HBL1_DMSO_200M_050219_1,20046,LAILRLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20047 96.986 68.0 804110.0 25 0 107140.0 + 17922 KQVEEIFNLKF 11 85 465.5940835327081 1393.7604211983244 3 465.5943481326103 MULTI CID FTMS 0 0 0 20045 609883.375 0.2805999246376118 2 -0.2644500732421875 2 Unmodified _KQVEEIFNLKF_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 86.33184430468982 0.0029476721545555 3 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L} 6 7 57.497 0.0 0.0 4.1253 0.0 0.0 0.0 664.345385661875 664.345385661875 23.269921747127498 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.1549471895720984 0.7302046884880937 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L} 4.1253 - 358 1 1.556 55810.1 1.0 14202 5843 20045 HBL1_DMSO_200M_050219_1,20047 HBL1_DMSO_200M_050219_1,20047,KQVEEIFNLKF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20048 96.987 33.0 2112500.0 25 0 533110.0 20849 LMEARVDLI 9 64 530.2966119782501 1058.5786710233 2 530.2972289919853 MULTI CID FTMS 0 0 0 20045 1643842.25 0.216352693734363 -1 0.1425857543945312 3 Unmodified _LMEARVDLI_ ENSG00000100312|ENST00000216139|ACR 19.256988751693697 0.3154191944385105 3 VM{I|L}{I|L}{I|L} 5 6 47.206 0.0 0.0 4.4594 0.0 0.0 471.20994765449376 0.0 471.20994765449376 0.0 9.58166256570955 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 VM{I|L}{I|L}{I|L} 4.4594 - 85 1 1.556 59628.0 1.0 14203 5843 20045 HBL1_DMSO_200M_050219_1,20048 HBL1_DMSO_200M_050219_1,20048,LMEARVDLI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20049 96.988 56.0 1037900.0 25 0 67216.0 + 41344 VPIVMLPKI 9 75 505.32761797997887 1008.6406830267578 2 505.3277465701103 MULTI CID FTMS 0 0 0 20045 911606.75 0.6856066998079642 -1 0.1425857543945312 4 Unmodified _VPIVMLPKI_ ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-2|DNA2;nc|ENSG00000138346|P51530-3|DNA2;nc|ENSG00000138346|P51530-4|DNA2 54.773552608820026 0.0299037012502309 3 VP{I|L}VM{I|L}PK{I|L} 9 0 + 80.966 0.0 0.0 8.0273 8.0273 97.825 0.0 0.0 0.0 38.262011673746805 10.088422267289133 10.088422267289133 80.96633284699078 0 1.579689690656103 1.3010299956639813 0.0 0.0 + + VP{I|L}VM{I|L}PK{I|L} 8.0273 + + 360 + 1 1.556 49491.3 1.0 14204 5843 20045 HBL1_DMSO_200M_050219_1,20049 HBL1_DMSO_200M_050219_1,20049,VPIVMLPKI True True VPIVMLPKI 96.98827 505.32774657011 24020878.0 20045.0 nc|ENSG00000138346|P51530-3|DNA2;;ENSG00000138346|ENST00000358410|DNA2;;nc|ENSG00000138346|P51530-4|DNA2;;nc|ENSG00000138346|P51530-2|DNA2 5.5588555335998535 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20050 96.99 53.0 1385700.0 25 0 174450.0 4827 DFDNWRDW 8 78 577.238151153355 1152.46174937351 2 577.2384521365166 MULTI CID FTMS 0 0 0 20045 788464.5625 1.0 0 0.0 5 Unmodified _DFDNWRDW_ ENSG00000267060|ENST00000591916|PTGES3L;ENST00000464183.1_1_17:41121167-41123746:-|nuORF;nc|ENSG00000266967|Q9BTE6-2|AARSD1;nc|ENSG00000266967|Q9BTE6-3|AARSD1;nc|ENSG00000267060|E9PB15-2|PTGES3L;nc|ENSG00000267060|E9PB15-3|PTGES3L;nc|ENSG00000267060|E9PB15|PTGES3L 9.347437153973935 0.7675937258251505 3 [{M(Oxidation (M))|F}V]G{M(Oxidation (M))|F}{I|L}{I|L}DNV 9 7 38.18 0.0 0.0 3.3129 0.0 0.0 0.0 144.90923407493497 144.90923407493497 17.00882347361916 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [{M(Oxidation (M))|F}V]G{M(Oxidation (M))|F}{I|L}{I|L}DNV 3.3129 - 211 1 1.556 59884.5 1.0 14205 5843 20045 HBL1_DMSO_200M_050219_1,20050 HBL1_DMSO_200M_050219_1,20050,DFDNWRDW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20051 96.992 117.0 689430.0 25 0 64857.0 + 9879 FPFPKPALI 9 105 515.3100135121321 1028.605474091064 2 515.3102905154228 MULTI CID FTMS 0 0 0 20045 366321.40625 0.6593955106844002 -1 0.1425857543945312 6 Unmodified _FPFPKPALI_ ENSG00000172888|ENST00000339296|ZNF621;ENSG00000182983|ENST00000440367|ZNF662;ENST00000490457.5_1_3:40567331-40615968:+|nuORF;nc|ENSG00000172888|Q6ZSS3-2|ZNF621;nc|ENSG00000182983|Q6ZS27-3|ZNF662 44.40701690623563 0.0526327925666318 3 {M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK[PA]{I|L}{I|L} 9 0 + 48.355 0.0 0.0 4.701 4.701 84.455 0.0 0.0 0.0 17.23145030055166 7.113037394097432 7.113037394097432 10.28028723600243 0 0.805462187404089 0.0 0.0 0.0 + + {M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK[PA]{I|L}{I|L};{M(Oxidation (M))|F}P{M(Oxidation (M))|F}PKVVPV 4.701;3.7016 +;- + 383 + 1 1.556 70742.5 1.0 14206 5843 20045 HBL1_DMSO_200M_050219_1,20051 HBL1_DMSO_200M_050219_1,20051,FPFPKPALI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20052 97.0 429.0 381640.0 25 0 114870.0 -1 0 136 310.17148224871465 618.3284115642293 2 310.1713134646416 MULTI CID FTMS 0 0 0 20045 263369.96875 0.6666891062833327 2 -0.2644500732421875 7 3 Q{M(Oxidation (M))|F}C 3 -1 20.42 0.0 0.0 3.3024 0.0 0.0 82.07704470107178 155.08687769107658 237.1639223921484 0.0 0.0 0.0 0.0 0 1.024227503252014 0.0 0.0 0.0 Q{M(Oxidation (M))|F}C 3.3024 - 103 + 1 1.556 131333.0 1.0 14207 5843 20045 HBL1_DMSO_200M_050219_1,20052 HBL1_DMSO_200M_050219_1,20052, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20053 97.005 297.0 788200.0 25 0 120650.0 + 11543 GIPTVFVAV 9 110 902.5368646599404 901.5295881933404 1 902.5413696169852 MULTI CID FTMS 0 0 0 20045 240103.734375 0.2601385485732588 -1 0.1425857543945312 8 Unmodified _GIPTVFVAV_ ENSG00000128050|ENST00000512576|PAICS;ENST00000517543.1_1_8:4645759-4645930:+|nuORF;nc|ENSG00000128050|P22234-2|PAICS 97.07464715276576 0.0121042244793311 3 [TP]V{M(Oxidation (M))|F}VAVAV 9 4 + 83.968 0.0 0.0 9.3139 9.3139 85.807 0.0 0.0 0.0 8.04953742795611 16.478174818886373 8.04953742795611 1.8309843995574224 0 0.3494850021680094 1.0 2.5400990676322905 0.0 [TP]V{M(Oxidation (M))|F}VAVAV;[TP]VG{I|L}{M(Oxidation (M))|F}VAV;[TP]V{M(Oxidation (M))|F}VAG{I|L}V;[TP]VG{I|L}{M(Oxidation (M))|F}G{I|L}V;[TP]V{M(Oxidation (M))|F}VG{I|L}AV;[TP]VAV{M(Oxidation (M))|F}VAV;[VP]T{M(Oxidation (M))|F}VAVAV;[TP]V{M(Oxidation (M))|F}G{I|L}VAV;[TP]VG{M(Oxidation (M))|F}{I|L}VAV;[TP]V{M(Oxidation (M))|F}VGA{I|L}V 9.3139;9.1108;8.9263;8.7232;8.7173;8.6558;8.421;8.3821;8.3821;8.3296 -;-;-;-;-;-;-;-;-;- 4198 1 1.556 153659.6 1.0 14208 5843 20045 HBL1_DMSO_200M_050219_1,20053 HBL1_DMSO_200M_050219_1,20053,GIPTVFVAV True True GIPTVFVAV 97.005185 902.541369616985 4416913.0 20045.0 ENSG00000128050|ENST00000512576|PAICS;;ENST00000517543.1_1_8:4645759-4645930:+|nuORF;;nc|ENSG00000128050|P22234-2|PAICS 3.43023959795634 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20054 97.01 262.0 403370.0 25 0 32535.0 + 43927 YGIENEVFL 9 96 1083.5351396008164 1082.5278631342164 1 1083.538989245892 MULTI CID FTMS 0 0 0 20045 188737.71875 0.201823392505743 3 -0.3113861083984375 9 Unmodified _YGIENEVFL_ ENSG00000111716|ENST00000350669|LDHB;ENST00000542765.4_1_12:21788478-21790169:-|nuORF 78.14939416004806 0.0179651292570206 3 {[QD]|[EN]|[WG]|[KD]|[RS]}VEAYV{M(Oxidation (M))|F}{I|L} 9 4 + 79.445 0.0 0.0 7.3389 7.3389 80.026 0.0 0.0 0.0 15.48409776917672 44.46284805002578 15.48409776917672 0.2557626122369072 0 0.6549471895720985 0.0 1.6248037067706358 1.3494850021680094 {[QD]|[EN]|[WG]|[KD]|[RS]}VEAYV{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VAYEV{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}EVAYV{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VAYD{I|L}{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VAEYV{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VEAVY{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}EVAVY{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}V{[{M(Oxidation (M))|F}C]|[YS]}{I|L}V{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VE[YG]{I|L}{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}E[YG]{I|L}V{M(Oxidation (M))|F}{I|L} 7.3389;7.3152;7.221;6.6206;6.5134;6.4362;6.3183;6.0198;5.9709;5.9019 -;-;-;-;-;-;-;-;-;- 1195 1 1.556 73644.4 1.0 14209 5843 20045 HBL1_DMSO_200M_050219_1,20054 HBL1_DMSO_200M_050219_1,20054,YGIENEVFL True True YGIENEVFL 97.010082 1083.53898924589 26371809.0 20045.0 ENSG00000111716|ENST00000350669|LDHB;;ENST00000542765.4_1_12:21788478-21790169:-|nuORF 3.270600159962972 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20055 97.022 677.0 429930.0 25 0 32026.0 -1 0 143 1187.059404254595 0 1187.060961902142 PEAK CID FTMS 0 0 0 20045 189595.0625 0.9292495546196072 -1 0.1425857543945312 10 3 APPPPPY 7 -1 35.856 0.0 0.0 1.5115 0.0 0.0 1458.6370447379024 191.08313928775627 1649.720184025659 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 APPPPPY 1.5115 - 10101 + 1 1.556 171457.7 1.0 14210 5843 20045 HBL1_DMSO_200M_050219_1,20055 HBL1_DMSO_200M_050219_1,20055, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20056 97.025 126.0 430260.0 25 0 47544.0 10103 FPVAGALDPAI 11 91 535.7982164087542 1069.5818798843084 2 536.3046752810478 MULTI CID FTMS 0 0 0 20045 159645.75 0.0614181625439453 25 -2.742034912109375 11 Unmodified _FPVAGALDPAI_ nc|ENSG00000204428|Q5SRR4-2|LY6G5C 14.838274106304384 0.7264935675211688 3 {I|L} 1 10 14.604 0.0 0.0 1.3654 0.0 0.0 938.4867393587208 0.0 938.4867393587208 0.0 -0.8804562952784067 -0.8804562952784067 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3654 + + 173 + 1 1.556 50297.3 1.0 14211 5843 20045 HBL1_DMSO_200M_050219_1,20056 HBL1_DMSO_200M_050219_1,20056,FPVAGALDPAI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 20057 97.037 711.0 404820.0 25 0 42367.0 + 36255 SYFDAIPVTM 10 139 1143.5413618063196 1142.5340853397197 1 1143.541552722454 MULTI CID FTMS 0 0 0 20045 145079.828125 1.0 0 0.0 12 Unmodified _SYFDAIPVTM_ ENSG00000153395|ENST00000283415|LPCAT1;ENST00000507282.1_1_5:1488500-1495016:-|nuORF 53.832793166522166 0.0576554960245129 3 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}{I|L}AD{M(Oxidation (M))|F}[MT] 10 7 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F} + + 32.393 8.9009 1.9947 2.8352 2.8352 49.871 0.0 0.0 0.0 0.0 2.2159119299529166 0.0 0.0 0 0.8252574989159953 0.0 1.350576203518622 0.0 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}{I|L}AD{M(Oxidation (M))|F}[MT] 2.8352 - 581 + 1 1.556 170984.9 1.0 14212 5843 20045 HBL1_DMSO_200M_050219_1,20057 HBL1_DMSO_200M_050219_1,20057,SYFDAIPVTM True True SYFDAIPVTM 97.036893 1143.54155272245 1427467.25 20045.0 ENST00000507282.1_1_5:1488500-1495016:-|nuORF;;ENSG00000153395|ENST00000283415|LPCAT1 6.648967266082764 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20058 97.051 800.0 214540.0 25 0 18507.0 + -1 RWTLRLWPRRW 11 130 834.4747575381738 0 834.4745971560478 PEAK CID FTMS 0 0 0 20045 127589.53125 1.0 0 0.0 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RWTLRLWPRRW_ REV__ENST00000465475.5_1_3:124802831-124839525:-|nuORF 0.0 0.4761840153648598 3 VGT{M(Oxidation (M))|F}GAP 7 -1 10.214 0.0 0.0 0.61271 0.0 0.0 851.4844749378725 183.1153505914672 1034.5998255293398 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 VGT{M(Oxidation (M))|F}GAP 0.61271 - 494 + 1 1.556 114493.9 0.8799999952316284 14213 5843 20045 HBL1_DMSO_200M_050219_1,20058 HBL1_DMSO_200M_050219_1,20058,RWTLRLWPRRW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20059 97.066 800.0 145080.0 25 0 6449.2 -1 0 98 771.3662180162245 3081.4357661984977 4 771.6185790896416 MULTI CID FTMS 0 0 0 20045 124650.0390625 0.0951274946037676 10 -1.2223892211914062 14 3 [H{I|L}]VEA{I|L}Y{I|L}D 9 -1 50.8 0.0 0.0 1.6486 0.0 0.0 0.0 2024.845409103048 2024.845409103048 36.36291294060548 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}D 1.6486 - 277 1 1.556 82841.2 0.8100000023841858 14214 5843 20045 HBL1_DMSO_200M_050219_1,20059 HBL1_DMSO_200M_050219_1,20059, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20060 97.08 800.0 223050.0 25 0 20350.0 -1 0 145 856.9914428591728 0 856.9914428591728 PEAK CID FTMS 0 0 0 -1 0 15 3 {I|L}E 2 -1 6.858 0.0 0.0 0.40083 0.0 0.0 1098.6518682599624 367.1630953424438 1465.814963602406 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 {I|L}E 0.40083 - 243 + 1 1.556 115255.4 0.800000011920929 14215 5843 20045 HBL1_DMSO_200M_050219_1,20060 HBL1_DMSO_200M_050219_1,20060, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20061 97.088 503.0 397130.0 25 0 38005.0 + 37639 TLLPDLIQKV 10 143 570.3533543228413 1138.6921557124824 2 570.3528320193291 MULTI CID FTMS 0 0 0 20045 109723.5703125 0.4033692953065432 -1 0.1425857543945312 16 Unmodified _TLLPDLIQKV_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS 63.960520009940105 0.0261970246776379 3 {I|L}T{I|L}PD{I|L}{I|L}QKV 10 2 + 85.748 0.0 0.0 7.5304 7.5304 91.555 0.0 0.0 0.0 43.59890719653835 12.390690719683093 12.390690719683093 9.164539485499247 0 0.3494850021680094 2.0 0.3494850021680094 0.9476212463643424 {I|L}T{I|L}PD{I|L}{I|L}QKV;{I|L}T{I|L}PD{I|L}{I|L}[AG]KV;{I|L}T{I|L}V[EP]{I|L}QKV;{I|L}P{M(Oxidation (M))|F}{I|L}QNV{I|L}PV;{I|L}T{I|L}{[NV]|[RG]}QPQKV;{I|L}T{I|L}V[EP]{I|L}[AG]KV;{I|L}T{I|L}V[TA]{[NV]|[RG]}{I|L}PV;{I|L}T[KQ]QNV{I|L}PV;{I|L}TKKQNV{I|L}PV;{I|L}T{I|L}[RD]NV{I|L}PV 7.5304;6.7256;6.5872;6.2699;6.1167;5.7824;5.6502;5.5856;5.5856;5.4917 -;-;-;-;-;-;-;-;-;- 4489 + 1 1.556 152947.5 1.0 14216 5843 20045 HBL1_DMSO_200M_050219_1,20061 HBL1_DMSO_200M_050219_1,20061,TLLPDLIQKV True True TLLPDLIQKV 97.088472 570.352832019329 3423792.75 20045.0 nc|ENSG00000141279|P55786-2|NPEPPS;;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;;ENSG00000141279|ENST00000322157|NPEPPS 5.511891523996989 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20062 97.103 800.0 67746.0 25 0 8287.1 -1 0 73 826.5002929568291 0 826.5002929568291 PEAK CID FTMS 0 0 0 -1 0 17 3 E 1 -1 6.9897 0.0 0.0 0.42337 0.0 0.0 1282.81700939823 236.10407434635 1518.9210837445798 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.42337 - 9 + 1 1.556 43696.2 0.75 14217 5843 20045 HBL1_DMSO_200M_050219_1,20062 HBL1_DMSO_200M_050219_1,20062, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20063 97.117 800.0 180070.0 25 0 35904.0 + -1 DVYDAFPPL 9 126 1037.008471667767 0 1037.008471667767 PEAK CID FTMS 0 0 0 -1 0 18 ENST00000579768.1_1_17:55926599-55927356:-|nuORF;ENSG00000181610|ENST00000313608|MRPS23 3 {M(Oxidation (M))|F}P 2 -1 8.5835 0.0 0.0 0.41426 0.0 0.0 1599.7335036953295 225.12513147525627 1824.8586351705856 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}P 0.41426 - 304 + 1 1.556 95435.5 0.7799999713897705 14218 5843 20045 HBL1_DMSO_200M_050219_1,20063 HBL1_DMSO_200M_050219_1,20063, False False DVYDAFPPL 97.117357 1037.00847166777 402947.34375 20045.0 ENST00000579768.1_1_17:55926599-55927356:-|nuORF;;ENSG00000181610|ENST00000313608|MRPS23 2.294960618019104 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20064 97.131 800.0 147080.0 25 0 13834.0 1731 ALPVSLPQI 9 159 469.2893981062825 936.5642432793652 2 469.2899658083916 MULTI CID FTMS 0 0 0 20045 106134.7265625 0.2171784600197092 3 -0.3113861083984375 19 Unmodified _ALPVSLPQI_ ENSG00000064703|ENST00000369702|DDX20 24.67388899826682 0.2172451872415813 3 [VP]S{I|L}PT{I|L} 7 3 29.543 0.0 0.0 3.1544 0.0 0.0 0.0 226.10737007063383 226.10737007063383 -2.5524043749261693 0.0 -2.5524043749261693 0.0 0 0.0 1.0 0.7059771852360797 0.0 [VP]S{I|L}PT{I|L} 3.1544 - 379 1 1.556 92657.7 0.4799999892711639 14219 5843 20045 HBL1_DMSO_200M_050219_1,20064 HBL1_DMSO_200M_050219_1,20064,ALPVSLPQI False True ALPKIILAV 97.131172 469.289965808392 57112.88671875 20045.0 nc|ENSG00000135119|Q96EX2-4|RNFT2;;nc|ENSG00000135119|Q96EX2-3|RNFT2;;ENST00000547718.5_1_12:117186478-117290514:+|nuORF;;nc|ENSG00000135119|Q96EX2-5|RNFT2;;ENSG00000135119|ENST00000257575|RNFT2 -0.0229919056097666 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20065 97.135 134.0 372010.0 25 0 52034.0 + -1 IMELCSLVL 9 95 539.2864827949146 0 539.2888671755791 PEAK CID FTMS 0 0 0 20045 98932.5390625 0.7377883324553305 -3 0.3597869873046875 20 Carbamidomethyl (C) _IMELC(Carbamidomethyl (C))SLVL_ REV__ENST00000590156.5_1_18:43669898-43669940:-|nuORF 30.22481116460888 0.1097735003385577 3 VE{I|L} 3 -1 16.198 0.0 0.0 1.5046 0.0 0.0 129.0630035763541 603.2885836236936 732.3515872000478 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VE{I|L} 1.5046 - 137 + 1 1.556 47114.9 1.0 14220 5843 20045 HBL1_DMSO_200M_050219_1,20065 HBL1_DMSO_200M_050219_1,20065,IMELCSLVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20067 97.139 28.0 1990700.0 25 0 172250.0 -1 LMKCISLYL 9 72 550.3003780171566 1098.5862031011131 2 550.3007690310478 MULTI CID FTMS 0 0 0 20066 1488309.375 0.0401512809966584 7 -0.8130340576171875 1 Oxidation (M) _LM(Oxidation (M))KCISLYL_ ENST00000357066.7_1_19:2071060-2071678:-|nuORF 20.453626601364224 0.2830276176381075 3 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4 -1 50.037 0.0 0.0 4.5547 0.0 0.0 0.0 541.3131197565061 541.3131197565061 32.951081816939194 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4.5547 - 98 + 1 1.556 50905.3 1.0 14221 5844 20066 HBL1_DMSO_200M_050219_1,20067 HBL1_DMSO_200M_050219_1,20067,LMKCISLYL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20068 97.146 333.0 962840.0 25 0 223400.0 -1 0 119 1168.1753873528064 3501.504332658619 3 1168.844775378704 MULTI CID FTMS 0 0 0 20066 1702098.875 1.0 0 0.0 2 3 {M(Oxidation (M))|F}[YG]{M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]YGYW 10 -1 20.891 0.0 0.0 0.59662 0.0 0.0 944.3219118595944 1147.650971995868 2091.9728838554624 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[YG]{M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]YGYW 0.59662 - 339 + 1 1.556 251771.3 1.0 14222 5844 20066 HBL1_DMSO_200M_050219_1,20068 HBL1_DMSO_200M_050219_1,20068, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20069 97.147 11.0 6888500.0 25 0 992350.0 + 4021 DALRSILTI 9 81 501.3030275794831 1000.591502225766 2 501.3036071658134 MULTI CID FTMS 0 0 0 20066 6086180.5 0.0444908099596106 -3 0.3876190185546875 3 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 55.50274090549119 0.0285720310785888 3 {[QN]|[E{I|L}]|[KN]}GRS{I|L}{I|L}T{I|L} 9 3 + 62.598 0.0 0.0 6.2561 6.2561 79.987 0.0 0.0 0.0 2.04119982655925 14.973024840566469 2.04119982655925 2.04119982655925 0 0.7429928190999391 1.5228787452803376 0.805462187404089 0.0 {[QN]|[E{I|L}]|[KN]}GRS{I|L}{I|L}T{I|L};{[DA]|[EG]}{I|L}RS{I|L}{I|L}T{I|L};[{I|L}A]DRS{I|L}{I|L}T{I|L};[{I|L}T]{I|L}[RV]ADT{I|L};[{I|L}T]{I|L}[KG]QQT{I|L};[{I|L}T]{I|L}[RV]TGE{I|L};[{I|L}T]{I|L}[RV]ASE{I|L} 6.2561;6.0521;5.6544;4.8054;4.0557;4.0048;4.0048 -;+;-;-;-;-;- + 340 1 1.556 65878.0 1.0 14223 5844 20066 HBL1_DMSO_200M_050219_1,20069 HBL1_DMSO_200M_050219_1,20069,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20070 97.148 32.0 2904600.0 25 0 398720.0 + 40745 VLIPKLPQL 9 81 510.8440471600711 1019.673541386942 2 510.8444396853447 MULTI CID FTMS 0 0 0 20066 1730538.875 0.6581683686557637 -3 0.3876190185546875 4 Unmodified _VLIPKLPQL_ ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3 67.34385681178166 0.0221257235307089 3 [{I|L}V]{I|L}PK{I|L}PQ{I|L} 9 0 + 80.526 0.0 0.0 7.8972 7.8972 95.389 0.0 0.0 0.0 57.04818340385461 14.973024840566469 14.973024840566469 16.070006276765483 0 0.8252574989159953 1.6989700043360187 0.0 1.066901560044258 + + [{I|L}V]{I|L}PK{I|L}PQ{I|L};[{I|L}V]{I|L}PK{I|L}P[AG]{I|L};[{I|L}V]{I|L}PK[QP]{I|L}{I|L} 7.8972;6.3212;5.3448 +;-;- + 274 + 1 1.556 77421.1 1.0 14224 5844 20066 HBL1_DMSO_200M_050219_1,20070 HBL1_DMSO_200M_050219_1,20070,VLIPKLPQL True True VLIPKLPQL 97.147871 510.844439685345 168247552.0 20066.0 ENSG00000172057|ENST00000304046|ORMDL3;;nc|ENSG00000172057|Q8N138-4|ORMDL3 8.963234583536783 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20071 97.149 60.0 946980.0 25 0 118930.0 + 26247 NQLDSLMGL 9 91 495.7499837077281 989.4854144822564 2 495.7500488162041 MULTI CID FTMS 0 0 0 20066 956877.5625 0.9683912502700862 -2 0.29901123046875 5 Unmodified _NQLDSLMGL_ ENSG00000135148|ENST00000412615|TRAFD1 71.13359017698441 0.0206607516130725 3 {[QN]|[E{I|L}]|[KN]}{I|L}DS{I|L} 6 3 54.57 0.0 0.0 5.515 0.0 0.0 0.0 316.13352174227504 316.13352174227504 29.16386562212267 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9247425010840048 1.416386562212267 + {[QN]|[E{I|L}]|[KN]}{I|L}DS{I|L} 5.515 + + 155 1 1.556 48951.4 1.0 14225 5844 20066 HBL1_DMSO_200M_050219_1,20071 HBL1_DMSO_200M_050219_1,20071,NQLDSLMGL True True NQLDSLMGL 97.14935 495.750048816204 8369267.0 20066.0 ENSG00000135148|ENST00000412615|TRAFD1 5.143733978271484 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20072 97.151 85.0 872170.0 25 0 50158.0 -1 0 86 791.372936740873 2371.0969808228188 3 791.7087890505791 MULTI CID FTMS 0 0 0 20066 626664.1875 0.6513889581858607 8 -0.9814682006835938 6 3 [YK]APPPPPQ 9 -1 39.563 0.0 0.0 1.6685 0.0 0.0 0.0 1392.5568228565655 1392.5568228565655 3.138761967894545 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [YK]APPPPPQ 1.6685 - 5212 1 1.556 60015.6 1.0 14226 5844 20066 HBL1_DMSO_200M_050219_1,20072 HBL1_DMSO_200M_050219_1,20072, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20073 97.154 121.0 871490.0 25 0 111580.0 + 15447 IPPVILRL 8 82 460.8189768836969 919.6234008341938 2 460.8182556033134 MULTI CID FTMS 0 0 0 20066 629849.8125 1.0 0 0.0 7 Unmodified _IPPVILRL_ ENST00000495369.1_1_2:128262943-128263081:-|nuORF 23.1484247019978 0.5573009939494978 3 {I|L}PPV{I|L} 5 3 60.701 0.0 0.0 6.6006 0.0 0.0 0.0 397.25730310611567 397.25730310611567 33.7069645798925 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPV{I|L} 6.6006 + + 201 + 1 1.556 87164.3 1.0 14227 5844 20066 HBL1_DMSO_200M_050219_1,20073 HBL1_DMSO_200M_050219_1,20073,IPPVILRL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20074 97.156 99.0 427980.0 25 0 72411.0 + 9858 FPFGYVSNI 9 76 522.2638698765668 1042.5131868199337 2 522.2643310427666 MULTI CID FTMS 0 0 0 20066 465368.03125 0.7045917815509446 -7 0.8927078247070312 8 Unmodified _FPFGYVSNI_ ENSG00000159259|ENST00000314103|CHAF1B;ENST00000481458.1_1_21:37771819-37785123:+|nuORF 46.92087301778293 0.0471210510596396 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}VSN{I|L} 9 2 + 51.507 0.0 0.0 4.9406 4.9406 79.576 0.0 0.0 0.0 15.731136571674751 33.944021793654855 15.731136571674751 4.771212547196626 0 0.218765315847925 1.0969100130080565 0.0 0.4247425010840047 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}VSN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GYV{M(Oxidation (M))|F}SN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{M(Oxidation (M))|F}YVSN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HA]{M(Oxidation (M))|F}VDN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YR]{M(Oxidation (M))|F}[WK];[PA]T[WQ]VDN{I|L};{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T]Y{[WN]|[YH]}{I|L};{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T]YV[WK];{NN|[MP]|[D{I|L}]|[EV]}[HA]{M(Oxidation (M))|F}[KT][DP];{NN|[MP]|[D{I|L}]|[EV]}[HA]HH[WK] 4.9406;4.483;4.3631;2.4399;1.4084;1.1448;1.0526;0.64518;0.31279;0.2689 -;-;-;-;-;-;-;-;-;- 330 1 1.556 39899.5 1.0 14228 5844 20066 HBL1_DMSO_200M_050219_1,20074 HBL1_DMSO_200M_050219_1,20074,FPFGYVSNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20075 97.159 154.0 507680.0 25 0 66126.0 + 8785 EVVKWLDYL 9 93 582.8188036678691 1163.6230544025382 2 582.8193237185478 MULTI CID FTMS 0 0 0 20066 421632.1875 0.3360354687211403 -3 0.3876190185546875 9 Unmodified _EVVKWLDYL_ ENST00000462279.5_1_5:60188520-60189039:-|nuORF 47.74868867922204 0.0453060283459952 3 [WD]KV{I|L}D{I|L}Y{I|L} 9 5 + 65.002 0.0 0.0 5.5862 5.5862 75.993 0.0 0.0 0.0 0.9691001300805624 8.384767769392738 0.9691001300805624 0.9691001300805624 0 1.0994850021680094 0.0 1.424742501084005 0.9916440611282626 [WD]KV{I|L}D{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}WV{I|L}D{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VW{I|L}D{I|L}Y{I|L};[WD]KVEV{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}WVEV{I|L}Y{I|L};{[TV]|[{I|L}S]}AAW{I|L}D{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}WD{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VWEV{I|L}Y{I|L};{[TV]|[{I|L}S]}AAWEV{I|L}Y{I|L};{[TV]|[{I|L}S]}AA{I|L}WD{I|L}Y{I|L} 5.5862;5.5029;4.8303;4.6757;4.5924;4.3503;3.9441;3.9199;3.7671;3.7266 -;-;-;-;-;-;-;-;-;- 577 1 1.556 65345.5 1.0 14229 5844 20066 HBL1_DMSO_200M_050219_1,20075 HBL1_DMSO_200M_050219_1,20075,EVVKWLDYL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20076 97.161 75.0 460650.0 25 0 35959.0 + 20035 LIPDEVFDAV 10 65 559.292566453529 1116.570579973858 2 559.2925292849541 MULTI CID FTMS 0 0 0 20066 352417.84375 1.0 0 0.0 10 Unmodified _LIPDEVFDAV_ ENSG00000066557|ENST00000370952|LRRC40 7.910154910731844 0.6900473968920092 3 [DP]EV{M(Oxidation (M))|F}D 6 4 19.965 0.0 0.0 1.7881 0.0 0.0 0.0 411.261591912542 411.261591912542 5.361300909143058 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + [DP]EV{M(Oxidation (M))|F}D 1.7881 + + 80 1 1.556 30788.2 1.0 14230 5844 20066 HBL1_DMSO_200M_050219_1,20076 HBL1_DMSO_200M_050219_1,20076,LIPDEVFDAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20077 97.163 127.0 512090.0 25 0 65917.0 + + 37239 FVIHNLPVL 9 92 526.3185002386151 1050.62244754403 2 526.3185912966728 MULTI CID FTMS 0 0 0 20066 345610.96875 1.0 0 0.0 11 Unmodified _TILLNRPQP_ nc|ENSG00000086475|P49903-3|SEPHS1;nc|ENSG00000086475|P49903-4|SEPHS1;ENSG00000086475|ENST00000327347|SEPHS1 20.453626601364224 0.2830276176381075 3 [{I|L}T]{I|L} 3 -1 27.905 0.0 0.0 2.656 0.0 0.0 0.0 720.3827069036582 720.3827069036582 5.228787452803374 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.5 0.0 [{I|L}T]{I|L} 2.656 + + 233 1 1.556 56736.8 1.0 14231 5844 20066 HBL1_DMSO_200M_050219_1,20077 HBL1_DMSO_200M_050219_1,20077,TILLNRPQP False False FVIHNLPVL 97.16334 526.318591296673 3082868.0 20066.0 nc|ENSG00000086475|P49903-3|SEPHS1;;nc|ENSG00000086475|P49903-4|SEPHS1;;ENSG00000086475|ENST00000327347|SEPHS1 5.099614938100179 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20078 97.166 109.0 441370.0 25 0 35333.0 + -1 DLLVKTQCL 9 67 545.3003992159358 1088.5862454986716 2 545.3005248904228 MULTI CID FTMS 0 0 0 20066 365686.09375 0.4009184019992961 11 -1.1998977661132812 12 Carbamidomethyl (C) _DLLVKTQC(Carbamidomethyl (C))L_ REV__ENSG00000005156|ENST00000378526|LIG3;REV__nc|ENSG00000005156|P49916-3|LIG3 20.453626601364224 0.2830276176381075 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{[WT]|[RM]}TVE{I|L} 9 -1 + 50.652 0.0 0.0 4.653 4.653 54.518 0.0 0.0 0.0 0.2456819149073652 10.0 0.2456819149073652 0.0 0 0.0 1.154901959985743 0.5 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{[WT]|[RM]}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[CA]|SS}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}VV{[MG]|[TS]}TVE{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[WT]|[RM]}TVE{I|L} 4.653;4.653;4.6304;4.6304;4.0304;4.0304 -;-;-;-;-;- 211 1 1.556 46330.7 1.0 14232 5844 20066 HBL1_DMSO_200M_050219_1,20078 HBL1_DMSO_200M_050219_1,20078,DLLVKTQCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20079 97.17 240.0 198870.0 25 0 11720.0 + -1 FHLLMELGLLQ 11 92 665.3630954246398 1328.7116379160796 2 665.3638183474541 MULTI CID FTMS 0 0 0 20066 315809.53125 1.0 0 0.0 13 Oxidation (M) _FHLLM(Oxidation (M))ELGLLQ_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 22.736283301280096 0.5583477779825423 3 {[VA]|[{I|L}G]}TGM{I|L}AAGGAG{I|L}A{[VA]|[{I|L}G]} 16 -1 + 106.4 0.0 0.0 8.0079 8.0079 87.306 0.0 0.0 0.0 11.512676753306494 6.154017961346412 6.154017961346412 3.6991128507179374 0 0.3252574989159953 1.5228787452803376 4.703402196076127 0.0 {[VA]|[{I|L}G]}TGM{I|L}AAGGAG{I|L}A{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}TGM{I|L}AAGQG{I|L}A{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}ASM{I|L}AAGGAG{I|L}A{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}TGM{I|L}AQGAG{I|L}A{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}TGM{I|L}AANAG{I|L}A{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}TGM{I|L}AAGGQ{I|L}A{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}ASM{I|L}AAGQG{I|L}A{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}TGM{I|L}AQQG{I|L}A{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}ASM{I|L}AQGAG{I|L}A{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}ASM{I|L}AANAG{I|L}A{[VA]|[{I|L}G]} 8.0079;7.7295;7.669;7.599;7.5755;7.4098;7.3906;7.3221;7.2601;7.2366 -;-;-;-;-;-;-;-;-;- 37581 1 1.556 41885.0 1.0 14233 5844 20066 HBL1_DMSO_200M_050219_1,20079 HBL1_DMSO_200M_050219_1,20079,FHLLMELGLLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20080 97.173 139.0 431380.0 25 0 71926.0 + 19544 LFQDPRSWF 9 90 598.2977395456585 1194.5809261581169 2 598.2973510622978 MULTI CID FTMS 0 0 0 20066 311987.34375 0.5453458383410064 -3 0.3876190185546875 14 Unmodified _LFQDPRSWF_ ENST00000451653.5_2_3:42590110-42590281:-|nuORF 22.736283301280096 0.2418982879461534 3 {I|L}{M(Oxidation (M))|F}QD 4 5 39.553 0.0 0.0 3.311 0.0 0.0 0.0 688.3221979320224 688.3221979320224 22.799533125180563 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3807196863200844 + {I|L}{M(Oxidation (M))|F}QD 3.311 + + 211 + 1 1.556 52243.2 1.0 14234 5844 20066 HBL1_DMSO_200M_050219_1,20080 HBL1_DMSO_200M_050219_1,20080,LFQDPRSWF False True LFQDPRSWF 97.172971 598.297351062298 15775749.0 20066.0 ENST00000451653.5_2_3:42590110-42590281:-|nuORF 5.075539747873942 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20081 97.186 733.0 280080.0 25 0 13728.0 -1 0 132 1096.5412400701853 0 1096.537158191204 PEAK CID FTMS 0 0 0 20066 259729.828125 1.0 0 0.0 15 3 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}N 4 -1 22.295 0.0 0.0 1.0175 0.0 0.0 1410.6383796823477 256.1305025690063 1666.768882251354 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5752574989159953 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}N 1.0175 - 834 + 1 1.556 121243.3 1.0 14235 5844 20066 HBL1_DMSO_200M_050219_1,20081 HBL1_DMSO_200M_050219_1,20081, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20082 97.189 186.0 423520.0 25 0 47918.0 + 20643 LLPTGVFQV 9 119 487.2901920549447 972.5658311766896 2 487.2907897830009 MULTI CID FTMS 0 0 0 20066 250346.71875 0.7107851292134547 3 -0.305267333984375 16 Unmodified _LLPTGVFQV_ ENSG00000136147|ENST00000378319|PHF11;ENST00000482487.5_1_13:50070137-50095117:+|nuORF 23.1484247019978 0.2366544122328345 3 [EP]K{M(Oxidation (M))|F}Q 5 6 16.196 0.0 0.0 1.6653 0.0 0.0 0.0 340.2259623624895 340.2259623624895 2.217096140692938 0.0 0.0 0.0 0 0.0 0.721246399047171 0.2742275032520141 0.0 [EP]K{M(Oxidation (M))|F}Q 1.6653 - 292 1 1.556 64539.4 1.0 14236 5844 20066 HBL1_DMSO_200M_050219_1,20082 HBL1_DMSO_200M_050219_1,20082,LLPTGVFQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20083 97.203 800.0 413310.0 25 0 52482.0 + 41327 VPIIWVPLV 9 171 518.3315558659916 1034.6485587987831 2 518.3318969607353 MULTI CID FTMS 0 0 0 20066 240773.25 0.0511854152128772 6 -0.7067184448242188 17 Unmodified _VPIIWVPLV_ ENSG00000103089|ENST00000219368|FA2H 56.04830969593885 0.0282699710924866 3 VP{I|L}V 4 5 48.791 0.0 0.0 4.7157 0.0 0.0 0.0 623.3538155877882 623.3538155877882 16.9193800377178 0.0 0.0 0.0 0 0.6139829889124311 1.2218487496163564 0.0 0.0 + VP{I|L}V 4.7157 + + 431 + 1 1.556 255543.0 0.8700000047683716 14237 5844 20066 HBL1_DMSO_200M_050219_1,20083 HBL1_DMSO_200M_050219_1,20083,VPIIWVPLV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20084 97.217 800.0 369110.0 25 0 11226.0 37852 TLVDALDTL 9 165 960.5244540375346 959.5171775709346 1 960.5261108279228 MULTI CID FTMS 0 0 0 20066 201892.78125 0.1352876800382223 2 -0.1549606323242187 18 Unmodified _TLVDALDTL_ ENSG00000134109|ENST00000256497|EDEM1 107.99703571036002 0.0067560930197464 3 [{I|L}T]ADV{I|L}DT{I|L} 9 2 + 88.673 0.0 0.0 9.2414 9.2414 82.925 0.0 0.0 0.0 4.449762079538559 16.478174818886373 4.449762079538559 0.2557626122369072 0 0.5941876774005248 1.6989700043360187 2.559894379144197 0.0 [{I|L}T]ADV{I|L}DT{I|L};[{I|L}T]ADVEVT{I|L};[{I|L}T]DAV{I|L}DT{I|L};[{I|L}T]DAVEVT{I|L};[{I|L}T]VDA{I|L}DT{I|L};[{I|L}T]VDAEVT{I|L};[{I|L}T]DVA{I|L}DT{I|L};[{I|L}T]DVAEVT{I|L};{[QN]|[E{I|L}]|[KN]}GTV{I|L}DT{I|L};{[QN]|[E{I|L}]|[KN]}GTVEVT{I|L} 9.2414;9.2148;9.2089;9.1823;9.1294;9.1028;8.9295;8.9029;8.7777;8.751 -;-;-;-;+;-;-;-;-;- + 21473 1 1.556 186925.3 0.959999978542328 14238 5844 20066 HBL1_DMSO_200M_050219_1,20084 HBL1_DMSO_200M_050219_1,20084,TLVDALDTL True True TIVDALDTL 97.217 960.526110827923 10661898.0 20066.0 ENSG00000111885|ENST00000368468|MAN1A1;;nc|ENSG00000111885|P33908-2|MAN1A1;;ENSG00000198162|ENST00000356554|MAN1A2 5.169148127237956 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20085 97.229 620.0 205720.0 25 0 25945.0 11635 GLAPHESQL 9 152 476.2501236030211 950.4856942728422 2 476.2498351931572 MULTI CID FTMS 0 0 0 20066 204368.953125 0.6294251994080918 3 -0.305267333984375 19 Unmodified _GLAPHESQL_ ENSG00000129514|ENST00000250448|FOXA1;nc|ENSG00000129514|P55317-2|FOXA1 30.22481116460888 0.1466181017706357 3 {[VA]|[{I|L}G]}A[QP]{I|L}[HS]E 9 4 + 25.55 0.0 0.0 2.6881 2.6881 69.358 0.0 0.0 0.0 0.5130329756504572 3.8677393793293326 0.5130329756504572 1.7630010468697357 0 0.0 1.154901959985743 0.0 0.7302046884880937 {[VA]|[{I|L}G]}A[QP]{I|L}[HS]E;[Q{I|L}][QP]{I|L}[HS]E;{M(Oxidation (M))|F}[HS]{I|L}[YV]SV;[Q{I|L}]G[PA]{I|L}[HS]E;[{I|L}P]QQ{I|L}[HS]E;{[VA]|[{I|L}G]}Q[PA]{I|L}[HS]E;[MT]R[R{M(Oxidation (M))|F}]Q{I|L};[VP]{M(Oxidation (M))|F}A{[HG]|PP}[QP]V;{[VA]|[{I|L}G]}AV{[HG]|PP}[PS]DV;[QA][PG]{I|L}{I|L}[HS]E 2.6881;2.5026;2.1829;2.1321;2.0404;1.9527;1.9408;1.8967;1.8717;1.7672 -;-;-;-;-;-;-;-;-;- 1026 1 1.556 100873.8 1.0 14239 5844 20066 HBL1_DMSO_200M_050219_1,20085 HBL1_DMSO_200M_050219_1,20085,GLAPHESQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20086 97.243 800.0 250440.0 25 0 26137.0 + 44273 YLLDQHILI 9 194 564.327708127629 1126.6408633220578 2 564.3276855349541 MULTI CID FTMS 0 0 0 20066 177095.390625 0.4040033315173432 2 -0.1549606323242187 20 Unmodified _YLLDQHILI_ ENSG00000168918|ENST00000445964|INPP5D;nc|ENSG00000168918|Q92835-2|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D 61.60191391372663 0.0251951588191061 3 Y{I|L}{I|L}DQH{I|L}{I|L}{I|L} 9 0 + 55.729 0.0 0.0 4.9464 4.9464 74.319 0.0 0.0 0.0 28.067685390975807 3.217196696094433 3.217196696094433 1.288624837399297 0 0.7429928190999391 2.0 0.9247425010840048 0.0 + + Y{I|L}{I|L}DQH{I|L}{I|L}{I|L};Y{I|L}{I|L}DSKY{I|L}{I|L};Y{I|L}{I|L}{[CA]|SS}RY{I|L}{I|L};Y{I|L}{I|L}{[CA]|SS}{I|L}RY{I|L};Y{I|L}{I|L}D[AG]H{I|L}{I|L}{I|L};Y{I|L}{I|L}[KS]DY{I|L}{I|L};Y{I|L}{[WT]|[RM]}RY{I|L}{I|L};Y{I|L}{[WT]|[RM]}{I|L}RY{I|L};Y{I|L}{I|L}{[CA]|SS}{I|L}[YV]G{I|L};Y{I|L}{I|L}{[CA]|SS}{I|L}[YV]AV 4.9464;4.8321;4.5631;4.2994;4.1291;4.1256;4.0787;3.815;3.2153;2.512 +;-;-;-;-;-;-;-;-;- + 1363 + 1 1.556 153409.6 0.6899999976158142 14240 5844 20066 HBL1_DMSO_200M_050219_1,20086 HBL1_DMSO_200M_050219_1,20086,YLLDQHILI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20088 97.254 447.0 334200.0 25 0 87915.0 -1 LQSSGCAG 8 103 411.1777975909994 820.3410422487989 2 411.1779357790947 MULTI CID FTMS 0 0 0 20087 144996.765625 0.2125038448482148 1 -0.04693603515625 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))LQSSGC(Carbamidomethyl (C))AG_ ENST00000412350.6_2_9:1050519-1050555:+|nuORF 2.302733041254933 0.8103549651115762 3 {I|L} 1 -1 8.8515 0.0 0.0 1.079 0.0 0.0 155.09411497477782 549.1389864557249 704.2331014305028 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.079 + + 28 + 1 1.568 120593.2 1.0 14241 5845 20087 HBL1_DMSO_200M_050219_1,20088 HBL1_DMSO_200M_050219_1,20088,LQSSGCAG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20089 97.257 134.0 857190.0 25 0 172530.0 + 31677 RRKRKMQRWRL 11 81 807.4932710436753 1612.9719891541506 2 807.4939453005791 MULTI CID FTMS 0 0 0 20087 265568.125 0.3962350910262999 -2 0.2644500732421875 2 Unmodified _RRKRKMQRWRL_ REV__ENST00000229214.8_1_12:75893569-75893638:-|nuORF 0.0 0.8751479354844584 3 N 1 -1 11.99 0.0 0.0 0.74333 0.0 0.0 1480.918352534813 0.0 1480.918352534813 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.74333 - 25 + 1 1.568 82856.1 1.0 14242 5845 20087 HBL1_DMSO_200M_050219_1,20089 HBL1_DMSO_200M_050219_1,20089,RRKRKMQRWRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20090 97.261 181.0 718470.0 25 0 85449.0 + 10622 FVNDIFERI 9 117 576.805936717175 1151.59732050115 2 576.8057739138603 MULTI CID FTMS 0 0 0 20087 250929.0625 0.0071358754042436 9 -0.9681015014648438 3 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 59.36838082759317 0.0264317782606298 3 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L} 9 0 + 80.443 0.0 0.0 6.9853 6.9853 90.743 0.0 0.0 0.0 12.25268461881508 10.624241387177946 10.624241387177946 9.208187539523747 0 1.0994850021680094 0.0 0.3252574989159953 0.7302046884880937 + + {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}{I|L}WV;{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}{I|L}VW;{M(Oxidation (M))|F}VND{I|L}{I|L}{M(Oxidation (M))|F}WV;{M(Oxidation (M))|F}VND{I|L}{I|L}{M(Oxidation (M))|F}VW;{M(Oxidation (M))|F}V{I|L}[DN]{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}{I|L}WV;{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}{I|L}VW;{M(Oxidation (M))|F}VGGD{I|L}{I|L}{M(Oxidation (M))|F}WV 6.9853;6.1857;6.0628;5.9427;5.9098;5.7897;5.0536;4.8943;4.7742;4.7414 +;-;-;-;-;-;-;-;-;- + 1240 + 1 1.568 104297.9 1.0 14243 5845 20087 HBL1_DMSO_200M_050219_1,20090 HBL1_DMSO_200M_050219_1,20090,FVNDIFERI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20091 97.265 244.0 257600.0 25 0 55187.0 -1 AQMEVASFLL 10 99 562.7861514828006 1123.5577500324011 2 562.7872802615166 MULTI CID FTMS 0 0 0 20087 178896.78125 0.5307056097578612 -2 0.2644500732421875 4 Oxidation (M) _AQM(Oxidation (M))EVASFLL_ ENSG00000117399|ENST00000310955|CDC20;ENST00000488829.1_1_9:89626569-89628063:+|nuORF 31.26834338654808 0.266153677697784 3 [{M(Oxidation (M))|F}E]QAVASE 8 -1 46.988 0.0 0.0 4.182 0.0 0.0 0.0 259.1665301091411 259.1665301091411 27.94653786155798 0.0 0.0 0.0 0 0.0 0.0 1.4802046884880935 0.7059771852360797 [{M(Oxidation (M))|F}E]QAVASE 4.182 - 1029 1 1.568 53342.6 1.0 14244 5845 20087 HBL1_DMSO_200M_050219_1,20091 HBL1_DMSO_200M_050219_1,20091,AQMEVASFLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20092 97.268 134.0 486920.0 25 0 86646.0 + 6358 NPHLFSLNI 9 111 527.760892222357 1053.507231511514 2 527.7598754763603 MULTI CID FTMS 0 0 0 20087 184545.90625 0.6986734658384681 -3 0.4070358276367187 5 Unmodified _DVRNTYSSL_ ENSG00000136631|ENST00000644510|VPS45;ENST00000497638.2_1_1:150048975-150049098:+|nuORF;ENST00000460366.5_1_1:150039914-150049098:+|nuORF 15.847184025352805 0.4077185912009129 3 {M(Oxidation (M))|F}AAKKC(Carbamidomethyl (C))CN{I|L} 9 8 + 28.297 0.0 0.0 2.6859 2.6859 79.381 0.0 0.0 0.0 7.673943891430351 10.21189299069938 7.673943891430351 10.21189299069938 0 0.0738194166937224 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}AAKKC(Carbamidomethyl (C))CN{I|L};{M(Oxidation (M))|F}AAKKC(Carbamidomethyl (C))CQV;[MN]{I|L}SAA[{M(Oxidation (M))|F}T]S{I|L};[MN]{I|L}TQ[{M(Oxidation (M))|F}T]S{I|L};{NN|[MP]|[D{I|L}]|[EV]}[W{I|L}]{[QG]|[NA]}[WH];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NC(Carbamidomethyl (C))KKAAE;[H{I|L}]{[ES]|[DT]|[{I|L}C]}[NP]S[RD];{NN|[MP]|[D{I|L}]|[EV]}[DP][NP]{I|L}[RD];[MN][QT]{I|L}[{M(Oxidation (M))|F}T]S{I|L};[MN]P[WK]{[YC]|[HE]}{I|L} 2.6859;1.7166;1.2121;1.037;0.91541;0.914;0.86077;0.79121;0.71324;0.70739 -;-;-;-;-;-;-;-;-;- 499 + 1 1.568 57583.9 1.0 14245 5845 20087 HBL1_DMSO_200M_050219_1,20092 HBL1_DMSO_200M_050219_1,20092,DVRNTYSSL False False NPHLFSLNI 97.268054 527.75987547636 2854695.75 20087.0 ENSG00000136631|ENST00000644510|VPS45;;ENST00000497638.2_1_1:150048975-150049098:+|nuORF;;ENST00000460366.5_1_1:150039914-150049098:+|nuORF 4.265797853469849 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20093 97.282 800.0 285430.0 25 0 27107.0 + 23687 LTSSHTSPIP 10 180 347.1865689250261 1038.5378773752784 3 347.1864501833916 MULTI CID FTMS 0 0 0 20087 140769.859375 0.6941509238578868 -3 0.4070358276367187 6 Unmodified _LTSSHTSPIP_ REV__ENSG00000169894|ENST00000379458|MUC3A;REV__nc|ENSG00000169894|Q02505-2|MUC3A;REV__nc|ENSG00000169894|Q02505-3|MUC3A;REV__nc|ENSG00000169894|Q02505-4|MUC3A;REV__nc|ENSG00000169894|Q02505-5|MUC3A 18.1463463914782 0.5430639438673815 3 {I|L}T 2 -1 28.734 0.0 0.0 2.7667 0.0 0.0 0.0 821.3852228878562 821.3852228878562 12.280056144304565 0.0 0.0 0.0 0 0.2887254899964357 0.8860566476931632 0.3252574989159953 0.0 {I|L}T 2.7667 + + 148 + 1 1.568 181870.8 0.550000011920929 14246 5845 20087 HBL1_DMSO_200M_050219_1,20093 HBL1_DMSO_200M_050219_1,20093,LTSSHTSPIP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20094 97.29 468.0 387300.0 25 0 43794.0 -1 ILSEFCMELT 10 152 601.2770477783645 1200.5395426235289 2 601.7787353396416 MULTI CID FTMS 0 0 0 20087 91151.3515625 0.0533301105003689 -3 0.4070358276367187 7 Oxidation (M) _ILSEFCM(Oxidation (M))ELT_ ENSG00000196678|ENST00000357967|ERI2;ENST00000567859.5_1_16:20812516-20814833:-|nuORF;nc|ENSG00000196678|A8K979-3|ERI2;nc|ENSG00000196678|A8K979-4|ERI2 25.399314129420983 0.3980215340001851 3 {NN|[MP]|[D{I|L}]|[EV]}{NN|[MP]|[D{I|L}]|[EV]}VAAGA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 12 -1 + 45.549 0.0 0.0 3.7941 3.7941 52.008 0.0 0.0 0.0 0.0 5.942124970647029 0.0 0.0 0 0.0 1.6989700043360187 0.2742275032520141 1.8807196863200843 {NN|[MP]|[D{I|L}]|[EV]}{NN|[MP]|[D{I|L}]|[EV]}VAAGA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}[PS]EAAGA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}W[TP]AGA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}{NN|[MP]|[D{I|L}]|[EV]}VAQA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}[PS]EAQA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}{NN|[MP]|[D{I|L}]|[EV]}G{I|L}AGA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}W[TP]QA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}[VP]MAAGA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}[PS]EAAQ{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}{NN|[MP]|[D{I|L}]|[EV]}VAAQ{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.7941;3.7941;3.6912;3.4941;3.4941;3.3988;3.3942;3.25;3.2396;3.2396 -;-;-;-;-;-;-;-;-;- 2131 1 1.568 131101.5 1.0 14247 5845 20087 HBL1_DMSO_200M_050219_1,20094 HBL1_DMSO_200M_050219_1,20094,ILSEFCMELT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20096 97.294 13.0 8162500.0 25 0 2020900.0 + 4292 DAREVMILI 9 76 530.2966119782501 1058.5786710233 2 530.2971069216728 MULTI CID FTMS 0 0 0 20095 5453723.5 0.7177864969144079 2 -0.2524871826171875 1 Unmodified _DAREVMILI_ ENSG00000113552|ENST00000311337|GNPDA1;ENSG00000163281|ENST00000295448|GNPDA2;nc|ENSG00000113552|P46926-2|GNPDA1;nc|ENSG00000163281|Q8TDQ7-2|GNPDA2;nc|ENSG00000163281|Q8TDQ7-3|GNPDA2;nc|ENSG00000163281|Q8TDQ7-4|GNPDA2;nc|ENSG00000163281|Q8TDQ7-5|GNPDA2 29.84058131909904 0.1515068451768857 3 EVM{I|L}{I|L}{I|L} 6 3 46.146 0.0 0.0 4.3593 0.0 0.0 342.16560561347814 0.0 342.16560561347814 0.0 24.20818753952375 0.0 0.0 0 0.5 0.0 0.0 0.0 + EVM{I|L}{I|L}{I|L} 4.3593 + + 105 1 1.568 82517.1 1.0 14248 5846 20095 HBL1_DMSO_200M_050219_1,20096 HBL1_DMSO_200M_050219_1,20096,DAREVMILI False True DAREVMILI 97.294399 530.297106921673 126219968.0 20095.0 nc|ENSG00000163281|Q8TDQ7-2|GNPDA2;;nc|ENSG00000163281|Q8TDQ7-4|GNPDA2;;nc|ENSG00000163281|Q8TDQ7-5|GNPDA2;;nc|ENSG00000113552|P46926-2|GNPDA1;;nc|ENSG00000163281|Q8TDQ7-3|GNPDA2;;ENSG00000113552|ENST00000311337|GNPDA1;;ENSG00000163281|ENST00000295448|GNPDA2 4.128638744354248 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20097 97.297 148.0 1111000.0 25 0 81440.0 + 41345 VPIVMLPKI 9 131 505.32761797997887 1008.6406830267578 2 505.3276550173759 MULTI CID FTMS 0 0 0 20095 712290.0625 0.5357034039695665 2 -0.2524871826171875 2 Unmodified _VPIVMLPKI_ ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-2|DNA2;nc|ENSG00000138346|P51530-3|DNA2;nc|ENSG00000138346|P51530-4|DNA2 74.42276476219924 0.019389277360085 3 VP{I|L}VM{I|L}PK{I|L} 9 0 + 82.126 0.0 0.0 8.1422 8.1422 89.353 0.0 0.0 0.0 50.48749699399184 11.480625354554377 11.480625354554377 5.249383640358133 0 1.7614393726401687 1.0969100130080565 0.0 0.0 + + VP{I|L}VM{I|L}PK{I|L};V{I|L}PVM{I|L}PK{I|L};VP{I|L}{M(Oxidation (M))|F}PVPK{I|L};VP{I|L}{I|L}MVPK{I|L};VP{M(Oxidation (M))|F}PV{I|L}PK{I|L};V{I|L}P{M(Oxidation (M))|F}PVPK{I|L};VP{I|L}VM[KP]{I|L}{I|L};V{I|L}P{I|L}MVPK{I|L};VP{M(Oxidation (M))|F}{I|L}PVPK{I|L};V{I|L}MPV{I|L}PK{I|L} 8.1422;7.6218;6.4704;6.1055;6.0536;5.9499;5.6073;5.5851;5.5762;5.5332 +;-;-;-;-;-;-;-;-;- + 2264 + 1 1.568 127024.5 1.0 14249 5846 20095 HBL1_DMSO_200M_050219_1,20097 HBL1_DMSO_200M_050219_1,20097,VPIVMLPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20098 97.3 155.0 848070.0 25 0 269080.0 + 22735 LQKCSKILL 9 117 523.3237407183835 1044.632928503567 2 523.3240234255791 MULTI CID FTMS 0 0 0 20095 438016.875 0.2340420558172805 -1 0.04693603515625 3 Unmodified _LQKCSKILL_ REV__ENSG00000117724|ENST00000366955|CENPF 56.17704186161178 0.0281986971544335 3 {I|L}{I|L}{M(Oxidation (M))|F}[NS]{I|L}{I|L}{I|L}{I|L} 9 -1 + 64.918 0.0 0.0 6.2145 6.2145 87.422 0.0 0.0 0.0 12.307379527607496 16.478174818886373 12.307379527607496 8.990889426632691 0 0.5 1.6989700043360187 0.6307196863200843 1.1549471895720984 {I|L}{I|L}{M(Oxidation (M))|F}[NS]{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}WK{I|L}{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{[DA]|[EG]}K{I|L}{I|L}{I|L};[KA]G{M(Oxidation (M))|F}[NG]{I|L}{I|L}{I|L}{I|L};[KQ]{M(Oxidation (M))|F}[NG]{I|L}{I|L}{I|L}{I|L};[KA]G{I|L}[CS]K{I|L}{I|L}{I|L};[KQ]{I|L}[CS]K{I|L}{I|L}{I|L};[KA][MT]QK{I|L}{I|L}{I|L};[Q{I|L}]K[CS]K{I|L}{I|L}{I|L};{[QG]|[NA]}V{M(Oxidation (M))|F}QK{I|L}{I|L}{I|L} 6.2145;5.3538;5.0709;5.0363;4.8408;4.5806;4.385;4.2664;3.9853;3.851 -;-;-;-;-;-;-;-;+;- + 768 1 1.568 103608.1 1.0 14250 5846 20095 HBL1_DMSO_200M_050219_1,20098 HBL1_DMSO_200M_050219_1,20098,LQKCSKILL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20099 97.311 586.0 394900.0 25 0 77686.0 -1 0 92 1113.6823378456922 2225.3501227581846 2 1114.188525378704 MULTI CID FTMS 0 0 0 20095 316418.03125 1.0 0 0.0 4 3 D 1 -1 11.99 0.0 0.0 0.53878 0.0 0.0 1224.7560253398508 882.5436658588649 2107.299691198716 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 D 0.53878 - 11 + 1 1.568 148248.6 1.0 14251 5846 20095 HBL1_DMSO_200M_050219_1,20099 HBL1_DMSO_200M_050219_1,20099, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20100 97.325 800.0 245810.0 25 0 54421.0 + 1759 ALRLIISI 8 133 449.80769777763936 897.6008426220787 2 449.8073608279228 MULTI CID FTMS 0 0 0 20095 267656.59375 0.0266055895062943 8 -0.9211654663085938 5 Unmodified _ALRLIISI_ ENSG00000111684|ENST00000261407|LPCAT3;ENST00000536971.1_1_12:7090970-7125761:-|nuORF 81.61307344734483 0.0848032199178113 3 {I|L}A{I|L}R{I|L}{I|L}S{I|L} 8 2 + 83.595 0.0 0.0 9.3131 9.3131 97.014 0.0 0.0 0.0 49.77426446677609 14.904630595263413 14.904630595263413 15.861105033189787 0 2.048455006504028 1.6989700043360187 1.0994850021680094 0.0 {I|L}A{I|L}R{I|L}{I|L}S{I|L};{I|L}A{I|L}R{I|L}{I|L}TV;[{I|L}A]R{I|L}{I|L}{I|L}S{I|L};[{I|L}A]R{I|L}{I|L}S{I|L}{I|L};{I|L}A{I|L}[{I|L}T][RV]{I|L};{I|L}{I|L}RA{I|L}{I|L}S{I|L};[{I|L}A]R{I|L}S{I|L}{I|L}{I|L};{I|L}{I|L}RA{I|L}S{I|L}{I|L};[R{I|L}]{I|L}A{I|L}{I|L}S{I|L};[R{I|L}]{I|L}A{I|L}S{I|L}{I|L} 9.3131;7.5461;7.4563;7.2616;6.8917;6.09;5.9627;5.8953;5.7139;5.5192 -;-;+;-;-;-;-;-;-;- + 313 + 1 1.568 154149.5 0.8999999761581421 14252 5846 20095 HBL1_DMSO_200M_050219_1,20100 HBL1_DMSO_200M_050219_1,20100,ALRLIISI True True LALRIISI 97.324545 449.807360827923 307440832.0 20095.0 ENST00000487533.1_1_2:9411660-9411717:-|nuORF 3.0984445412953696 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20101 97.329 226.0 760880.0 25 0 56546.0 + 14835 ILFVEYEL 8 152 513.2818628465604 1024.5491727599208 2 513.2820312380791 MULTI CID FTMS 0 0 0 20095 278347.21875 0.5136411043394088 -2 0.1549606323242187 6 Unmodified _ILFVEYEL_ REV__ENST00000503043.1_1_4:119234230-119239656:-|nuORF 15.768221252438446 0.6779680726941459 3 {I|L}{I|L}[MT]Y{I|L} 6 -1 25.181 0.0 0.0 2.4578 0.0 0.0 0.0 287.1222227521541 287.1222227521541 9.317496819840654 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.6307196863200843 0.0 {I|L}{I|L}[MT]Y{I|L} 2.4578 - 1460 1 1.568 128919.5 1.0 14253 5846 20095 HBL1_DMSO_200M_050219_1,20101 HBL1_DMSO_200M_050219_1,20101,ILFVEYEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20102 97.332 135.0 834630.0 25 0 69454.0 + 9880 FPFPKPALI 9 142 515.3100135121321 1028.605474091064 2 515.3105956912041 MULTI CID FTMS 0 0 0 20095 248424.8125 0.4471761772865651 2 -0.2524871826171875 7 Unmodified _FPFPKPALI_ ENSG00000172888|ENST00000339296|ZNF621;ENSG00000182983|ENST00000440367|ZNF662;ENST00000490457.5_1_3:40567331-40615968:+|nuORF;nc|ENSG00000172888|Q6ZSS3-2|ZNF621;nc|ENSG00000182983|Q6ZS27-3|ZNF662 50.855029805455786 0.0384952370514206 3 {M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK[PA]{I|L}{I|L} 9 0 + 47.845 0.0 0.0 4.6514 4.6514 80.774 0.0 0.0 0.0 21.74865027867404 10.365612383257384 10.365612383257384 6.932342842105896 0 1.055462187404089 0.0 0.0 0.0 + + {M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK[PA]{I|L}{I|L};{M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK[{I|L}P]A{I|L};{M(Oxidation (M))|F}{I|L}MPK[PA]{I|L}{I|L};{M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK[{I|L}P]{I|L}A;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}PKVVPV;{M(Oxidation (M))|F}{I|L}MPK[{I|L}P]A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[PA]{I|L}M{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{[QV]|[N{I|L}]|[RA]|[KV]}AN{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[PA]P{M(Oxidation (M))|F}{I|L}{I|L};{M(Oxidation (M))|F}{I|L}MPK[{I|L}P]{I|L}A 4.6514;3.9775;3.6035;3.3271;3.221;2.9295;2.8657;2.662;2.4516;2.2791 +;-;-;-;-;-;-;-;-;- + 910 + 1 1.568 93569.4 1.0 14254 5846 20095 HBL1_DMSO_200M_050219_1,20102 HBL1_DMSO_200M_050219_1,20102,FPFPKPALI True True FPFPKPALI 97.331558 515.310595691204 16365194.0 20095.0 nc|ENSG00000172888|Q6ZSS3-2|ZNF621;;ENST00000490457.5_1_3:40567331-40615968:+|nuORF;;ENSG00000182983|ENST00000440367|ZNF662;;nc|ENSG00000182983|Q6ZS27-3|ZNF662;;ENSG00000172888|ENST00000339296|ZNF621 5.277137756347656 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20103 97.343 672.0 427430.0 25 0 59242.0 + 9862 FPFGYVSNI 9 126 1043.5205595530672 1042.5132830864673 1 1043.524707019329 MULTI CID FTMS 0 0 0 20095 205073.671875 0.4817606062129931 -3 0.3113861083984375 8 Unmodified _FPFGYVSNI_ ENSG00000159259|ENST00000314103|CHAF1B;ENST00000481458.1_1_21:37771819-37785123:+|nuORF 103.35351024395868 0.0092202910191236 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}VSN{I|L} 9 2 + 93.126 0.0 0.0 8.9329 8.9329 87.792 0.0 0.0 0.0 28.1424927368726 69.86108164983278 28.1424927368726 3.133345013315264 0 1.0228787452803376 2.0 0.9802046884880936 0.3252574989159953 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}VSN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{M(Oxidation (M))|F}YVSN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}GYVSN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GYV{M(Oxidation (M))|F}SN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}VSGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{M(Oxidation (M))|F}YVSGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}GYVSGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GYV{M(Oxidation (M))|F}SGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[TA]{M(Oxidation (M))|F}SN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GYVAYN{I|L} 8.9329;8.6323;8.5943;8.4453;7.7376;7.4371;7.3991;7.25;6.8974;6.8051 -;-;+;-;-;-;-;-;-;- + 5975 1 1.568 182862.5 1.0 14255 5846 20095 HBL1_DMSO_200M_050219_1,20103 HBL1_DMSO_200M_050219_1,20103,FPFGYVSNI True True FPFGYVSNI 97.343295 1043.52470701933 18407344.0 20095.0 ENST00000481458.1_1_21:37771819-37785123:+|nuORF;;ENSG00000159259|ENST00000314103|CHAF1B 7.427084445953369 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20104 97.347 181.0 458850.0 25 0 69582.0 + 26093 NPHLFSLNI 9 125 527.7874155171831 1053.5602781011662 2 527.7872802615166 MULTI CID FTMS 0 0 0 20095 224944.109375 0.944454507279322 2 -0.2524871826171875 9 Unmodified _NPHLFSLNI_ ENSG00000136631|ENST00000644510|VPS45;ENST00000460366.5_1_1:150039914-150049098:+|nuORF;ENST00000497638.2_1_1:150048975-150049098:+|nuORF 36.12702656103203 0.0967173616627612 3 {I|L}S{M(Oxidation (M))|F}{I|L}CN{I|L} 7 6 30.539 0.0 0.0 2.8986 0.0 0.0 245.1365853294849 0.0 245.1365853294849 0.0 21.00569700455854 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.5 {I|L}S{M(Oxidation (M))|F}{I|L}CN{I|L} 2.8986 - 1779 + 1 1.568 66313.9 1.0 14256 5846 20095 HBL1_DMSO_200M_050219_1,20104 HBL1_DMSO_200M_050219_1,20104,NPHLFSLNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20105 97.362 800.0 256230.0 25 0 14255.0 -1 0 142 687.8339866364652 2747.3068406794605 4 688.0865356326103 MULTI CID FTMS 0 0 0 20095 187106.6875 0.6253887780610361 -2 0.1549606323242187 10 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 73.923 0.0 0.0 2.6908 0.0 0.0 0.0 1706.694144716823 1706.694144716823 49.710084362531575 0.0 0.0 0.0 0 1.924742501084005 1.5228787452803376 0.2614393726401688 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.6908 - 2134 1 1.568 148230.2 0.8399999737739563 14257 5846 20095 HBL1_DMSO_200M_050219_1,20105 HBL1_DMSO_200M_050219_1,20105, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20106 97.376 800.0 345750.0 25 0 28260.0 + + 15817 DACARYLLF 9 200 535.7982164087542 1069.5818798843084 2 536.3027831912041 MULTI CID FTMS 0 0 0 20095 170007.3125 0.0654044141656405 28 -2.7131118774414062 11 Unmodified _ISGPVELGWL_ ENST00000481107.1_1_17:15928260-15930833:+|nuORF;ENST00000475723.5_1_17:15903657-15930833:+|nuORF;ENSG00000011295|ENST00000261647|TTC19 30.63653989081413 0.2803493085145199 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[TP]PP{I|L} 8 -1 29.804 0.0 0.0 2.7865 0.0 0.0 0.0 161.0317306990319 161.0317306990319 3.081597033474427 0.0 0.0 0.0 0 0.0 2.0 0.9247425010840048 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[TP]PP{I|L} 2.7865 - 4461 1 1.568 218945.6 0.8100000023841858 14258 5846 20095 HBL1_DMSO_200M_050219_1,20106 HBL1_DMSO_200M_050219_1,20106,ISGPVELGWL False False DACARYLLF 97.375664 536.302783191204 416511.25 20095.0 ENST00000481107.1_1_17:15928260-15930833:+|nuORF;;ENST00000475723.5_1_17:15903657-15930833:+|nuORF;;ENSG00000011295|ENST00000261647|TTC19 0.0590509275595347 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20107 97.389 800.0 306870.0 25 0 49049.0 + 21036 LPAANLLQI 9 173 476.7952282599576 951.5759035867152 2 476.7953979372978 MULTI CID FTMS 0 0 0 20095 144920.96875 0.7969539413592897 -1 0.04693603515625 12 Unmodified _LPAANLLQI_ ENSG00000179454|ENST00000396128|KLHL28;nc|ENSG00000179454|Q9NXS3-2|KLHL28 56.541270873467816 0.0279970378729908 3 [Q{I|L}]VA[PA]{I|L}Q{I|L} 9 4 + 33.439 0.0 0.0 3.514 3.514 73.406 0.0 0.0 0.0 3.171179927883649 7.319845938712042 3.171179927883649 3.171179927883649 0 0.6989700043360187 0.3979400086720376 0.0 1.2346368802282015 [Q{I|L}]VA[PA]{I|L}Q{I|L};{I|L}{I|L}NA[PA]{I|L}Q{I|L};[AG]{I|L}P[Q{I|L}]{I|L}Q{I|L};{[VA]|[{I|L}G]}AP[Q{I|L}]{I|L}Q{I|L};[Q{I|L}]P[Q{I|L}]{I|L}Q{I|L};[Q{I|L}]G{I|L}[PA]{I|L}Q{I|L};[Q{I|L}]VPAA{I|L}Q{I|L};[VS][KP][PA]{I|L}Q{I|L};[AG]{I|L}VA[PA]{I|L}Q{I|L};{I|L}{I|L}NPAA{I|L}Q{I|L} 3.514;3.1808;2.9765;2.9105;2.8614;2.8276;2.8263;2.6351;2.5329;2.493 -;-;-;-;-;-;-;-;-;- 1112 1 1.568 186155.2 0.699999988079071 14259 5846 20095 HBL1_DMSO_200M_050219_1,20107 HBL1_DMSO_200M_050219_1,20107,LPAANLLQI True True LPAANLLQI 97.38948 476.795397937298 1652719.625 20095.0 ENSG00000179454|ENST00000396128|KLHL28;;nc|ENSG00000179454|Q9NXS3-2|KLHL28 1.9187406698862712 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20108 97.404 754.0 362310.0 25 0 28247.0 -1 0 138 1186.5547871823137 2371.095021431427 2 1186.554614245892 MULTI CID FTMS 0 0 0 20095 120902.953125 0.7753800598235356 8 -0.9211654663085938 13 3 APPPPPP{[QN]|[E{I|L}]|[KN]} 9 -1 65.645 0.0 0.0 2.7686 0.0 0.0 1457.6299468238085 0.0 1457.6299468238085 0.0 27.5120700450486 0.0 0.0 0 1.3807196863200843 0.0 0.2302046884880938 1.5969100130080562 APPPPPP{[QN]|[E{I|L}]|[KN]} 2.7686 - 24428 + 1 1.568 160986.2 1.0 14260 5846 20095 HBL1_DMSO_200M_050219_1,20108 HBL1_DMSO_200M_050219_1,20108, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20109 97.416 693.0 304610.0 25 0 24898.0 + -1 MRRMKFRRRRL 11 147 819.4742521363925 1636.9339513395848 2 819.4758788943291 MULTI CID FTMS 0 0 0 20095 126952.7890625 0.7876145848964495 -1 0.04693603515625 14 2 Oxidation (M) _M(Oxidation (M))RRM(Oxidation (M))KFRRRRL_ REV__ENSG00000023171|ENST00000635736|GRAMD1B 0.3506318815782774 0.8734936314171269 3 {[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}ADM 7 -1 21.519 0.0 0.0 1.3146 0.0 0.0 0.0 814.5637480527286 814.5637480527286 9.04524861644667 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.7302046884880937 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}ADM 1.3146 - 1460 1 1.568 141632.8 1.0 14261 5846 20095 HBL1_DMSO_200M_050219_1,20109 HBL1_DMSO_200M_050219_1,20109,MRRMKFRRRRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20110 97.43 800.0 281930.0 25 0 47394.0 + 33189 SFFSYTLASL 10 157 568.2878583621377 0 567.8483764529228 PEAK CID FTMS 0 0 0 20095 50211.69140625 0.4427253437820548 -2 0.1549606323242187 15 Unmodified _SFFSYTLASL_ ENSG00000155495|ENST00000285879|MAGEC1 14.838274106304384 0.3381107837965078 3 T{I|L}{I|L}V 4 8 18.443 0.0 0.0 1.6256 0.0 0.0 131.9723015767592 573.2824190729124 705.2547206496715 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L}{I|L}V 1.6256 - 369 + 1 1.568 176016.1 0.959999978542328 14262 5846 20095 HBL1_DMSO_200M_050219_1,20110 HBL1_DMSO_200M_050219_1,20110,SFFSYTLASL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20111 97.441 552.0 160140.0 25 0 28282.0 -1 ATKRRASCS 9 70 1036.5350157896237 1035.5277393230235 1 1039.186450183392 MULTI CID FTMS 0 0 0 -1 0 16 Carbamidomethyl (C) _ATKRRASC(Carbamidomethyl (C))S_ ENST00000478302.1_1_7:6974811-6975840:-|nuORF 6.723162845929126 0.6799819581413107 3 AN 2 -1 11.594 0.0 0.0 1.1196 0.0 0.0 0.0 847.4441622369749 847.4441622369749 10.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AN 1.1196 - 3 + 1 1.568 63249.8 1.0 14263 5846 20095 HBL1_DMSO_200M_050219_1,20111 HBL1_DMSO_200M_050219_1,20111,ATKRRASCS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20113 97.445 0.4 49740000.0 25 0 5038500.0 7746 ELEKRLTL 8 49 501.3030275794831 1000.591502225766 2 501.3037902712822 MULTI CID FTMS 0 0 0 20112 136796352.0 1.0 0 0.0 1 Unmodified _ELEKRLTL_ ENSG00000128881|ENST00000267890|TTBK2;nc|ENSG00000128881|Q6IQ55-2|TTBK2;nc|ENSG00000128881|Q6IQ55-3|TTBK2 15.847184025352805 0.6768015514314958 3 T{I|L} 2 6 24.196 0.0 0.0 2.4182 0.0 0.0 768.448342290999 0.0 768.448342290999 0.0 10.38364391835536 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 + T{I|L} 2.4182 + + 25 + 1 1.557 22299.3 1.0 14264 5847 20112 HBL1_DMSO_200M_050219_1,20113 HBL1_DMSO_200M_050219_1,20113,ELEKRLTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20114 97.446 21.0 1204200.0 25 0 141830.0 + 40746 VLIPKLPQL 9 40 510.8440471600711 1019.673541386942 2 510.8441650271416 MULTI CID FTMS 0 0 0 20112 2629325.5 1.0 0 0.0 2 Unmodified _VLIPKLPQL_ ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3 23.1484247019978 0.2366544122328345 3 [{I|L}V][SG]{I|L} 5 6 23.468 0.0 0.0 2.3015 0.0 0.0 0.0 547.357811977039 547.357811977039 10.993624753846092 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}V][SG]{I|L} 2.3015 - 29 1 1.557 26893.0 1.0 14265 5847 20112 HBL1_DMSO_200M_050219_1,20114 HBL1_DMSO_200M_050219_1,20114,VLIPKLPQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20115 97.447 40.0 1158300.0 25 0 160320.0 + 14205 IDKVDWIYI 9 68 582.8188036678691 1163.6230544025382 2 582.8187133669853 MULTI CID FTMS 0 0 0 20112 1254725.25 1.0 0 0.0 3 Unmodified _IDKVDWIYI_ REV__ENSG00000075702|ENST00000401500|WDR62;REV__ENST00000378860.8_1_19:36545867-36564559:+|nuORF;REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF;REV__nc|ENSG00000075702|O43379-2|WDR62;REV__nc|ENSG00000075702|O43379-3|WDR62;REV__nc|ENSG00000075702|O43379|WDR62 37.97399986684836 0.0865783450051559 3 [WD]KV{I|L}D{I|L}Y{I|L} 9 -1 + 51.393 0.0 0.0 4.4166 4.4166 75.447 0.0 0.0 0.0 4.771212547196626 8.384767769392738 4.771212547196626 3.0102999566398125 0 0.7742275032520141 0.0 1.3807196863200843 0.0 [WD]KV{I|L}D{I|L}Y{I|L};[WD]KVEV{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}WV{I|L}D{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}WVEV{I|L}Y{I|L};{[TV]|[{I|L}S]}[RV]{[DA]|[EG]}D{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}V]WD{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}V]{[DA]|[EG]}D{I|L}Y{I|L} 4.4166;4.1579;4.0066;3.7479;2.5044;2.3267;1.5353 -;-;-;-;-;-;- 185 1 1.557 41322.7 1.0 14266 5847 20112 HBL1_DMSO_200M_050219_1,20115 HBL1_DMSO_200M_050219_1,20115,IDKVDWIYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20116 97.448 55.0 1741000.0 25 0 314700.0 + 34989 SQMATILNL 9 119 495.7684751035184 989.5223972738368 2 495.7688171267509 MULTI CID FTMS 0 0 0 20112 652274.75 0.7730513674475354 -1 0.1503067016601562 4 Unmodified _SQMATILNL_ ENSG00000103051|ENST00000323786|COG4;nc|ENSG00000103051|Q9H9E3-3|COG4;nc|ENSG00000103051|Q9H9E3|COG4 45.69961567697781 0.0497987121815769 3 {[QS]|[NT]}MAT{I|L} 6 3 35.898 0.0 0.0 3.6278 0.0 0.0 0.0 355.19967933854315 355.19967933854315 5.209302318488636 0.0 0.0 0.0 0 0.0 0.0 1.484825539911597 0.4049471895720985 + {[QS]|[NT]}MAT{I|L} 3.6278 + + 768 1 1.557 76620.1 1.0 14267 5847 20112 HBL1_DMSO_200M_050219_1,20116 HBL1_DMSO_200M_050219_1,20116,SQMATILNL True True SQMATILNL 97.448463 495.768817126751 6617995.5 20112.0 nc|ENSG00000103051|Q9H9E3|COG4;;ENSG00000103051|ENST00000323786|COG4;;nc|ENSG00000103051|Q9H9E3-3|COG4 3.0618352691332498 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20117 97.45 84.0 962400.0 25 0 77456.0 + 44570 YPFFRGVTI 9 90 550.3003780171566 1098.5862031011131 2 550.3010131716728 MULTI CID FTMS 0 0 0 20112 611839.5625 0.0165060723337915 10 -1.1971435546875 5 Unmodified _YPFFRGVTI_ ENSG00000151465|ENST00000281141|CDC123;ENST00000467016.1_1_10:12238244-12240776:+|nuORF 24.881564428377168 0.2146028316269493 3 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 7 3 54.658 0.0 0.0 4.9753 0.0 0.0 0.0 128.0721377008422 128.0721377008422 12.310974793841597 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.2134679910804404 0.0 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 4.9753 - 231 + 1 1.557 67628.6 1.0 14268 5847 20112 HBL1_DMSO_200M_050219_1,20117 HBL1_DMSO_200M_050219_1,20117,YPFFRGVTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20118 97.457 367.0 471180.0 25 0 18270.0 + + 26863 PNFDVREIVNNI 12 160 715.3747615404125 1428.7349701476248 2 715.3735839724541 MULTI CID FTMS 0 0 0 20112 580546.6875 0.4807790292025962 -2 0.1972427368164062 6 Unmodified _PCFKRYFNKNI_ nc|ENSG00000131747|P11388-4|TOP2A;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A 29.081581746732265 0.4093582134107448 3 [NP]{M(Oxidation (M))|F}DVRE{I|L}VNN{I|L} 12 -1 + 94.827 0.0 0.0 6.6371 6.6371 88.223 0.0 0.0 0.0 8.129430823890644 11.343789510346523 8.129430823890644 8.129430823890644 0 2.254432191740108 1.3010299956639813 0.0 1.7491348669726232 [NP]{M(Oxidation (M))|F}DVRE{I|L}VNN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DMVRE{I|L}VNN{I|L};[NP]{M(Oxidation (M))|F}DVRE{I|L}VGGN{I|L};[NP]{M(Oxidation (M))|F}DVRE{I|L}VNGG{I|L};[NP]{M(Oxidation (M))|F}DVRE{I|L}VMP{I|L};[NP]{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L}VNN{I|L};[DN]{I|L}MVRE{I|L}VNN{I|L};[NP]{M(Oxidation (M))|F}D{I|L}EAA{I|L}VNN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DMVRE{I|L}VGGN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DMVRE{I|L}VNGG{I|L} 6.6371;6.0682;6.0003;6.0003;5.9095;5.6266;5.5713;5.4802;5.4313;5.4313 -;-;-;-;-;-;-;-;-;- 50789 1 1.557 125423.9 1.0 14269 5847 20112 HBL1_DMSO_200M_050219_1,20118 HBL1_DMSO_200M_050219_1,20118,PCFKRYFNKNI False False PNFDVREIVNNI 97.456974 715.373583972454 21405916.0 20112.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 5.820404211680095 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20119 97.459 115.0 831130.0 25 0 163390.0 + 19545 LFQDPRSWF 9 86 598.2977395456585 1194.5809261581169 2 598.2982055544853 MULTI CID FTMS 0 0 0 20112 572090.8125 1.0 0 0.0 7 Unmodified _LFQDPRSWF_ ENST00000451653.5_2_3:42590110-42590281:-|nuORF 45.69961567697781 0.0497987121815769 3 {I|L}{M(Oxidation (M))|F}QDP[YR]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 2 + 52.698 0.0 0.0 4.4115 4.4115 82.447 0.0 0.0 0.0 38.09439983606076 1.0160559578984163 1.0160559578984163 9.208187539523747 0 0.805462187404089 0.0 0.3807196863200844 0.8494850021680094 {I|L}{M(Oxidation (M))|F}QDP[YR]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}[AG]DP[YR]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}Q[WP][{M(Oxidation (M))|F}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[C(Carbamidomethyl (C))S][WY][{I|L}P]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.4115;3.6406;2.3389;0.30536 -;-;-;- 174 + 1 1.557 75351.9 1.0 14270 5847 20112 HBL1_DMSO_200M_050219_1,20119 HBL1_DMSO_200M_050219_1,20119,LFQDPRSWF True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20120 97.462 109.0 500280.0 25 0 31620.0 -1 0 69 791.372936740873 2371.0969808228188 3 791.7080566287041 MULTI CID FTMS 0 0 0 20112 403219.28125 0.4191281275888915 11 -1.295196533203125 8 3 {[HG]|PP}YPPPPP 8 -1 25.583 0.0 0.0 1.079 0.0 0.0 0.0 1525.64324698232 1525.64324698232 8.305300040193014 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}YPPPPP 1.079 - 1087 1 1.557 47926.6 1.0 14271 5847 20112 HBL1_DMSO_200M_050219_1,20120 HBL1_DMSO_200M_050219_1,20120, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20121 97.464 86.0 388040.0 25 0 47985.0 -1 0 49 1168.1753873528064 3501.504332658619 3 1168.506396472454 MULTI CID FTMS 0 0 0 20112 359414.0625 0.207270556427439 3 -0.4014511108398437 9 3 K 1 -1 5.4846 0.0 0.0 0.15663 0.0 0.0 2717.168225336157 653.2049654596311 3370.373190795788 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.15663 - 2 + 1 1.557 33282.0 1.0 14272 5847 20112 HBL1_DMSO_200M_050219_1,20121 HBL1_DMSO_200M_050219_1,20121, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20122 97.472 449.0 407640.0 25 0 60935.0 + -1 CSCEPNWLV 9 155 554.232958559637 1106.451364186074 2 554.2332641482353 MULTI CID FTMS 0 0 0 20112 359354.15625 0.7402609165528208 -2 0.1972427368164062 10 Carbamidomethyl (C) _C(Carbamidomethyl (C))SCEPNWLV_ REV__ENST00000398804.7_1_1:44170068-44173808:-|nuORF;REV__ENST00000439057.5_1_1:44170068-44172921:-|nuORF 15.847184025352805 0.4077185912009129 3 {[QG]|[NA]}WD[CS]{[CP]|[EA]}[{I|L}V] 10 -1 + 31.189 0.0 0.0 2.8188 2.8188 67.784 0.0 0.0 0.0 4.301620147618806 -1.6029699187244972 -1.6029699187244972 0.7699217471274977 0 0.3807196863200844 0.585026652029182 0.6861818737241735 1.329689690656103 {[QG]|[NA]}WD[CS]{[CP]|[EA]}[{I|L}V];{[QG]|[NA]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))GE{[QG]|[NA]}[{I|L}V];[AG]GC(Carbamidomethyl (C))C(Carbamidomethyl (C))GE{[QG]|[NA]}[{I|L}V];{[QG]|[NA]}WD[CS]Q{[{M(Oxidation (M))|F}H]|[RQ]};{[QG]|[NA]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))GQ{[DA]|[EG]}[{I|L}V];{[QG]|[NA]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))GE{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[QG]|[NA]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))W{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[QG]|[NA]}WC(Carbamidomethyl (C))C(Carbamidomethyl (C)){I|L}{[{M(Oxidation (M))|F}H]|[RQ]};[AG]GC(Carbamidomethyl (C))C(Carbamidomethyl (C))GQ{[DA]|[EG]}[{I|L}V];[AG]GWD[CS]{[CP]|[EA]}[{I|L}V] 2.8188;2.7492;2.1466;2.0551;2.0204;1.9855;1.9441;1.7389;1.6437;1.5562 -;-;-;-;-;-;-;-;-;- 584 1 1.557 153354.2 1.0 14273 5847 20112 HBL1_DMSO_200M_050219_1,20122 HBL1_DMSO_200M_050219_1,20122,CSCEPNWLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20123 97.48 495.0 451800.0 25 0 62710.0 + 15448 IPPVILRL 8 116 460.8189768836969 919.6234008341938 2 460.8185912966728 MULTI CID FTMS 0 0 0 20112 353203.625 0.560774359204878 3 -0.4014511108398437 11 Unmodified _IPPVILRL_ ENST00000495369.1_1_2:128262943-128263081:-|nuORF 74.39630413441286 0.1057069479668299 3 {I|L}PPV{I|L}{I|L}R{I|L} 8 0 + 86.487 0.0 0.0 9.4046 9.4046 97.954 0.0 0.0 0.0 65.55195866294525 19.7949064047406 19.7949064047406 23.622731327798547 0 0.7742275032520141 2.0 0.0 1.341129063296272 + + {I|L}PPV{I|L}{I|L}R{I|L};{I|L}P{I|L}VP{I|L}R{I|L};{I|L}{I|L}PVP{I|L}R{I|L};{I|L}{I|L}[KA]{I|L}{I|L}H{I|L} 9.4046;6.8359;4.6434;4.5539 +;-;-;- + 319 + 1 1.557 175633.2 1.0 14274 5847 20112 HBL1_DMSO_200M_050219_1,20123 HBL1_DMSO_200M_050219_1,20123,IPPVILRL True True IPPVILRL 97.48039 460.818591296673 41072992.0 20112.0 ENST00000495369.1_1_2:128262943-128263081:-|nuORF 2.3512486020723977 2.0 True 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20124 97.489 478.0 474430.0 25 0 65972.0 + 26536 NVIESFTEL 9 177 526.2684569453522 0 526.2676269412041 PEAK CID FTMS 0 0 0 20112 323717.25 1.0 0 0.0 12 Unmodified _NVIESFTEL_ ENSG00000197562|ENST00000248139|RAB40C;ENST00000561781.1_1_16:675886-677619:+|nuORF;nc|ENSG00000197562|Q96S21-2|RAB40C 34.40172386719151 0.0892392376003579 3 {I|L}ECE 4 6 12.479 0.0 0.0 1.1879 0.0 0.0 491.2593127170731 82.06700311832265 573.3263158353957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 {I|L}ECE 1.1879 - 935 + 1 1.557 174500.5 1.0 14275 5847 20112 HBL1_DMSO_200M_050219_1,20124 HBL1_DMSO_200M_050219_1,20124,NVIESFTEL True True NVIESFTEL 97.488855 526.267626941204 3812472.25 20112.0 nc|ENSG00000197562|Q96S21-2|RAB40C;;ENST00000561781.1_1_16:675886-677619:+|nuORF;;ENSG00000197562|ENST00000248139|RAB40C 3.2209635178248086 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20125 97.491 92.0 429780.0 25 0 42006.0 + 32063 RVLELIPQI 9 59 540.8417654986439 1079.6689780640877 2 540.8420287966728 MULTI CID FTMS 0 0 0 20112 300580.5 0.7919476150367174 -2 0.1972427368164062 13 Unmodified _RVLELIPQI_ ENSG00000100284|ENST00000449058|TOM1;ENST00000404284.6_1_22:35717823-35727385:+|nuORF;ENST00000424387.5_1_22:35695884-35743199:+|nuORF;ENST00000491987.1_1_22:35723272-35729230:+|nuORF;nc|ENSG00000100284|O60784-2|TOM1;nc|ENSG00000100284|O60784-3|TOM1;nc|ENSG00000100284|O60784-4|TOM1 22.736283301280096 0.2418982879461534 3 [Q{I|L}][KQ]{I|L}{I|L}PQ{I|L} 9 4 [Q{I|L}][KQ]{I|L}{I|L} + + 24.781 9.6658 1.336 2.2952 2.2952 49.112 0.0 0.0 0.0 0.0 13.81182901342207 0.0 0.0 0 0.5 0.0 0.0 0.805462187404089 [Q{I|L}][KQ]{I|L}{I|L}PQ{I|L} 2.2952 - 41 + 1 1.557 36911.1 1.0 14276 5847 20112 HBL1_DMSO_200M_050219_1,20125 HBL1_DMSO_200M_050219_1,20125,RVLELIPQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20126 97.493 102.0 293770.0 25 0 50684.0 + 30272 QYMPDHLE 8 49 1032.4415779388933 1031.434301472293 1 1032.443286120892 MULTI CID FTMS 0 0 0 20112 304680.09375 1.0 0 0.0 14 Unmodified _QYMPDHLE_ REV__ENSG00000146433|ENST00000684151|TMEM181;REV__nc|ENSG00000146433|Q9P2C4-1|TMEM181 9.347437153973935 0.7675937258251505 3 [YQ]{I|L} 3 -1 12.447 0.0 0.0 1.2068 0.0 0.0 0.0 624.2051504315308 624.2051504315308 4.51544993495972 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 [YQ]{I|L} 1.2068 - 46 1 1.557 29004.3 1.0 14277 5847 20112 HBL1_DMSO_200M_050219_1,20126 HBL1_DMSO_200M_050219_1,20126,QYMPDHLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20127 97.502 456.0 223020.0 25 0 19788.0 + -1 AFPGASLYL 9 116 938.4979695888196 0 938.0571166872978 PEAK CID FTMS 0 0 0 -1 0 15 ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2 3 RS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}SA 7 -1 29.458 0.0 0.0 1.5711 0.0 0.0 912.4672393711954 151.05181299381096 1063.5190523650065 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7544321917401078 0.0 RS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}SA 1.5711 - 288 + 1 1.557 68370.6 1.0 14278 5847 20112 HBL1_DMSO_200M_050219_1,20127 HBL1_DMSO_200M_050219_1,20127, False False AFPGASLYL 97.502409 938.057116687298 17512690.0 20112.0 ENSG00000183283|ENST00000412716|DAZAP2;;nc|ENSG00000183283|Q15038-2|DAZAP2;;nc|ENSG00000183283|Q15038-5|DAZAP2 4.380491574605306 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20128 97.507 245.0 267120.0 25 0 22721.0 + 41208 VPESTQSSLAV 11 108 559.292566453529 1116.570579973858 2 559.2930786013603 MULTI CID FTMS 0 0 0 20112 250251.28125 0.710098213493198 3 -0.4014511108398437 16 Unmodified _VPESTQSSLAV_ REV__ENSG00000204463|ENST00000676615|BAG6;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6 13.90604991867851 0.7458848613461305 3 {I|L}{I|L}M 3 -1 23.301 0.0 0.0 2.0868 0.0 0.0 0.0 756.3414594506736 756.3414594506736 5.676193466240562 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}M 2.0868 - 253 1 1.557 57378.3 1.0 14279 5847 20112 HBL1_DMSO_200M_050219_1,20128 HBL1_DMSO_200M_050219_1,20128,VPESTQSSLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20129 97.519 703.0 596310.0 25 0 79305.0 + 20625 LLPPPPLLA 9 164 465.8046970508198 929.5948411684396 2 465.8039123415947 MULTI CID FTMS 0 0 0 20112 239431.890625 0.0809074520824896 -4 0.4616928100585937 17 Unmodified _LLPPPPLLA_ ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2 79.93452657146344 0.0175326119056068 3 {I|L}{I|L}PPPP{I|L}A{I|L} 9 2 + 61.186 0.0 0.0 6.582 6.582 80.491 0.0 0.0 0.0 20.141048209728325 14.09256854528806 14.09256854528806 1.7609125905568137 0 1.9916440611282624 2.0 0.0 0.0 {I|L}{I|L}PPPP{I|L}A{I|L};{I|L}{I|L}PPPPA{I|L}{I|L};{I|L}{I|L}PPPAP{I|L}{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{I|L}{I|L}{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}A{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}A{I|L}{I|L};{I|L}{I|L}[YK]P{I|L}A{I|L};{I|L}{I|L}[YK]PA{I|L}{I|L};{I|L}{I|L}P[YK]{I|L}A{I|L};{I|L}{I|L}P[YK]A{I|L}{I|L} 6.582;6.3926;5.8793;5.4152;5.2808;5.0914;5.0488;4.8594;4.7189;4.5295 -;-;-;-;-;-;-;-;-;- 1757 1 1.557 319587.2 1.0 14280 5847 20112 HBL1_DMSO_200M_050219_1,20129 HBL1_DMSO_200M_050219_1,20129,LLPPPPLLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20130 97.528 509.0 168380.0 25 0 18657.0 -1 0 74 1196.342700183392 0 1196.342700183392 PEAK CID FTMS 0 0 0 -1 0 18 3 S 1 -1 4.6041 0.0 0.0 0.19259 0.0 0.0 1612.2846912829966 688.3197725885374 2300.604463871534 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.19259 - 56 + 1 1.557 56703.0 1.0 14281 5847 20112 HBL1_DMSO_200M_050219_1,20130 HBL1_DMSO_200M_050219_1,20130, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20131 97.537 522.0 170320.0 25 0 15019.0 -1 0 94 1178.815234363079 0 1178.815234363079 PEAK CID FTMS 0 0 0 -1 0 19 3 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.13156 0.0 0.0 1331.0681385486207 874.5050753229124 2205.573213871533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.13156 - 5 + 1 1.557 56829.8 1.0 14282 5847 20112 HBL1_DMSO_200M_050219_1,20131 HBL1_DMSO_200M_050219_1,20131, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20132 97.543 218.0 128800.0 25 0 24451.0 + 10028 FPMLPLNI 8 65 472.7676751483975 943.520797363595 2 472.7684203982353 MULTI CID FTMS 0 0 0 20112 184627.921875 1.0 0 0.0 20 Unmodified _FPMLPLNI_ REV__ENSG00000121281|ENST00000673801|ADCY7 15.768221252438446 0.6779680726941459 3 N{I|L} 2 -1 21.766 0.0 0.0 2.3069 0.0 0.0 698.3830085225778 0.0 698.3830085225778 0.0 9.776296993281406 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 N{I|L} 2.3069 + + 40 + 1 1.557 31750.5 1.0 14283 5847 20112 HBL1_DMSO_200M_050219_1,20132 HBL1_DMSO_200M_050219_1,20132,FPMLPLNI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20134 97.547 17.0 2378200.0 25 0 441500.0 15919 ISWENPLDNGG 11 59 601.2770477783645 1200.5395426235289 2 601.2776977419853 MULTI CID FTMS 0 0 0 20133 2496001.5 1.0 0 0.0 1 Unmodified _ISWENPLDNGG_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 7.608950283845883 0.8392484121837455 3 {[TV]|[{I|L}S]}{I|L} 3 8 25.942 0.0 0.0 2.1609 0.0 0.0 0.0 884.3160373347195 884.3160373347195 0.1967278472850608 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L} 2.1609 - 112 1 1.553 34287.6 1.0 14284 5848 20133 HBL1_DMSO_200M_050219_1,20134 HBL1_DMSO_200M_050219_1,20134,ISWENPLDNGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20135 97.549 107.0 648640.0 25 0 111790.0 + 31678 RRKRKMQRWRL 11 54 807.4932710436753 1612.9719891541506 2 807.9969970583916 MULTI CID FTMS 0 0 0 20133 376450.90625 0.5399759363806745 1 -0.1553421020507812 2 Unmodified _RRKRKMQRWRL_ REV__ENST00000229214.8_1_12:75893569-75893638:-|nuORF 0.0 0.8751479354844584 3 N 1 -1 12.218 0.0 0.0 0.75751 0.0 0.0 1480.9177421832503 0.0 1480.9177421832503 0.0 0.2287874528033739 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.75751 - 7 + 1 1.553 53476.6 1.0 14285 5848 20133 HBL1_DMSO_200M_050219_1,20135 HBL1_DMSO_200M_050219_1,20135,RRKRKMQRWRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20136 97.551 50.0 3335900.0 25 0 703150.0 + 32475 SAIQALVGL 9 97 871.5246402165207 870.5173637499206 1 871.5255615115166 MULTI CID FTMS 0 0 0 20133 739321.25 0.4943838426121815 -1 0.1021804809570312 3 Unmodified _SAIQALVGL_ ENSG00000113583|ENST00000231512|C5orf15;ENST00000509913.1_1_5:133295698-133304275:-|nuORF 92.4914307365334 0.0139747738690111 3 [Q{I|L}]ASA{I|L}VG{I|L} 9 4 + 87.016 0.0 0.0 9.9959 9.9959 85.614 0.0 0.0 0.0 1.7609125905568137 12.525749891599531 1.7609125905568137 1.599621380543411 0 0.6109243748081782 0.0 1.7856668758921828 1.1445990182825423 [Q{I|L}]ASA{I|L}VG{I|L};[Q{I|L}]TGA{I|L}VG{I|L};[QA]{I|L}SA{I|L}VG{I|L};[{I|L}A]QSA{I|L}VG{I|L};[{I|L}A]SQA{I|L}VG{I|L};[Q{I|L}]ASAV{I|L}G{I|L};[{I|L}A]GTQ{I|L}VG{I|L};[{I|L}A]SAQ{I|L}VG{I|L};[{I|L}A]GTGA{I|L}VG{I|L};[{I|L}A]SAGA{I|L}VG{I|L} 9.9959;9.8121;9.7936;9.7936;9.1584;9.0924;9.0223;9.0082;8.9749;8.9607 -;-;-;-;-;-;-;-;-;- 4632 1 1.553 115161.1 1.0 14286 5848 20133 HBL1_DMSO_200M_050219_1,20136 HBL1_DMSO_200M_050219_1,20136,SAIQALVGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20137 97.555 209.0 1486700.0 25 0 98061.0 + 14702 IIWSSSFSL 9 155 520.2764884030693 1038.5384238729384 2 520.2769653201103 MULTI CID FTMS 0 0 0 20133 490489.59375 1.0 0 0.0 4 Unmodified _IIWSSSFSL_ REV__ENSG00000121270|ENST00000356608|ABCC11;REV__ENST00000567385.5_1_16:48244807-48265838:-|nuORF;REV__nc|ENSG00000121270|Q96J66-2|ABCC11 23.1484247019978 0.2366544122328345 3 {I|L}T{[RE]|[WV]}VD 6 -1 30.684 0.0 0.0 2.9546 0.0 0.0 0.0 322.14154993228755 322.14154993228755 12.66257482205355 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.7742275032520141 0.0 {I|L}T{[RE]|[WV]}VD 2.9546 - 1727 + 1 1.553 233627.9 1.0 14287 5848 20133 HBL1_DMSO_200M_050219_1,20137 HBL1_DMSO_200M_050219_1,20137,IIWSSSFSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20138 97.557 97.0 615650.0 25 0 53197.0 -1 0 97 948.4466506278842 1894.8787483225683 2 948.4465820193292 MULTI CID FTMS 0 0 0 20133 411131.59375 0.8839116615814792 -1 0.1021804809570312 5 3 SV{[CP]|[EA]}{I|L}{[QG]|[NA]} 7 -1 24.537 0.0 0.0 1.2949 0.0 0.0 1192.550434434878 0.0 1192.550434434878 0.0 12.547728799788302 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.805462187404089 SV{[CP]|[EA]}{I|L}{[QG]|[NA]} 1.2949 - 202 + 1 1.553 43909.2 1.0 14288 5848 20133 HBL1_DMSO_200M_050219_1,20138 HBL1_DMSO_200M_050219_1,20138, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20139 97.568 635.0 424840.0 25 0 45421.0 + 39401 VALARALFI 9 151 487.3132346150024 972.6119162968048 2 487.3134338259697 MULTI CID FTMS 0 0 0 20133 295050.3125 0.3904753979998662 -1 0.1021804809570312 6 Unmodified _VALARALFI_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 52.268347100219714 0.0353964759249114 3 [{I|L}A]RA{I|L}G{I|L}{M(Oxidation (M))|F}{I|L} 9 4 + 52.225 0.0 0.0 5.3695 5.3695 76.578 0.0 0.0 0.0 1.434918167517537 7.327344480616915 1.434918167517537 1.7609125905568137 0 0.8252574989159953 1.0 0.0 0.6382104921644451 [{I|L}A]RA{I|L}G{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]RAVA{I|L}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}A{I|L}RA{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]RA{I|L}AV{M(Oxidation (M))|F}{I|L};[{I|L}A]RA{I|L}{M(Oxidation (M))|F}AV{I|L};[{I|L}A]RA{I|L}A{M(Oxidation (M))|F}V{I|L};{[VA]|[{I|L}G]}GV[RV]{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]RA{M(Oxidation (M))|F}{I|L}AV{I|L};[{I|L}A]R[Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}GV[R{I|L}]V{M(Oxidation (M))|F}{I|L} 5.3695;5.1885;4.8596;4.6509;4.4218;4.3222;4.0629;3.8624;3.3448;3.3443 -;-;-;-;-;-;-;-;-;- 943 1 1.553 206108.3 1.0 14289 5848 20133 HBL1_DMSO_200M_050219_1,20139 HBL1_DMSO_200M_050219_1,20139,VALARALFI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20140 97.579 655.0 379490.0 25 0 34848.0 + + 40799 RLVIELEEL 9 171 557.3289448648283 1112.6433367964564 2 557.3296996951103 MULTI CID FTMS 0 0 0 20133 253556.21875 1.0 0 0.0 7 Unmodified _VLLLREEEL_ nc|ENSG00000184220|Q9BQ75-2|CMSS1;ENSG00000184220|ENST00000421999|CMSS1 71.13359017698441 0.0206607516130725 3 [{I|L}V]R{I|L}E{I|L}EE{I|L} 9 -1 + 87.333 0.0 0.0 7.8492 7.8492 90.537 0.0 0.0 0.0 13.511966051297122 16.478174818886373 13.511966051297122 6.989700043360188 0 0.9559771852360796 1.154901959985743 1.0501648626366045 0.6549471895720985 [{I|L}V]R{I|L}E{I|L}EE{I|L};[{I|L}V]{I|L}RE{I|L}EE{I|L};[R{I|L}]V{I|L}E{I|L}EE{I|L};{I|L}{I|L}VRE{I|L}EE{I|L};[{I|L}V]{I|L}[VG]E{I|L}EE{I|L};[{I|L}V]R[QA]REE{I|L};{I|L}{I|L}V[VG]E{I|L}EE{I|L};[{I|L}V]{I|L}{[QN]|[E{I|L}]|[KN]}REE{I|L};[{I|L}V]R{I|L}E[HS]{M(Oxidation (M))|F}{I|L};[R{I|L}]V[QA]REE{I|L} 7.8492;7.221;6.6348;6.2471;5.8047;4.9099;4.8309;4.6239;4.2141;3.6955 -;-;-;-;-;-;-;-;-;- 2100 1 1.553 186576.6 1.0 14290 5848 20133 HBL1_DMSO_200M_050219_1,20140 HBL1_DMSO_200M_050219_1,20140,VLLLREEEL False False RLVIELEEL 97.579152 557.32969969511 2161511.25 20133.0 nc|ENSG00000184220|Q9BQ75-2|CMSS1;;ENSG00000184220|ENST00000421999|CMSS1 1.728582799434662 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20141 97.582 149.0 370190.0 25 0 59474.0 -1 0 70 1081.5289406307834 3241.56499249255 3 1081.860156238079 MULTI CID FTMS 0 0 0 20133 225474.125 0.2777810630749334 -3 0.2994232177734375 8 3 VM{[QV]|[N{I|L}]|[RA]|[KV]} 4 -1 21.198 0.0 0.0 0.65394 0.0 0.0 2766.325536321496 0.0 2766.325536321496 0.0 18.723637474483468 0.0 0.0 0 0.5 0.0 0.0 0.0 VM{[QV]|[N{I|L}]|[RA]|[KV]} 0.65394 - 9 1 1.553 42025.1 1.0 14291 5848 20133 HBL1_DMSO_200M_050219_1,20141 HBL1_DMSO_200M_050219_1,20141, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20142 97.594 670.0 328230.0 25 0 21261.0 + 29318 QILFKVVEL 9 164 544.8377388219537 0 544.8378784060478 PEAK CID FTMS 0 0 0 20133 228438.421875 1.0 0 0.0 9 Unmodified _QILFKVVEL_ REV__ENSG00000170921|ENST00000689528|TANC2;REV__ENST00000581143.1_1_17:61466073-61473304:+|nuORF;REV__nc|ENSG00000170921|Q9HCD6-2|TANC2;REV__nc|ENSG00000170921|Q9HCD6-4|TANC2;REV__nc|ENSG00000170921|Q9HCD6|TANC2 21.74664581756881 0.185237546287679 3 EVT{I|L} 4 -1 29.412 0.0 0.0 2.7042 0.0 0.0 130.1672283867385 512.2271290600946 642.394357446833 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1989700043360187 0.0 EVT{I|L} 2.7042 - 950 + 1 1.553 177983.3 1.0 14292 5848 20133 HBL1_DMSO_200M_050219_1,20142 HBL1_DMSO_200M_050219_1,20142,QILFKVVEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20143 97.605 668.0 340390.0 25 0 41383.0 + 10623 FVNDIFERI 9 162 576.805936717175 1151.59732050115 2 576.8041259646416 MULTI CID FTMS 0 0 0 20133 243139.6875 0.0069143625634305 12 -1.38323974609375 10 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 86.33184430468982 0.0159826143231117 3 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L} 9 0 + 88.572 0.0 0.0 7.6913 7.6913 88.003 0.0 0.0 0.0 12.252684618815096 4.771212547196626 4.771212547196626 4.771212547196626 0 1.25 0.0 0.6549471895720984 1.0629529932484498 + + {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}VN{I|L}D{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}V{I|L}ND{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VN{I|L}D{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}V{I|L}ND{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}VGG{I|L}D{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}WV{I|L} 7.6913;7.2769;6.9957;6.8917;6.7824;6.5814;6.4773;6.3681;6.1961;6.1668 +;-;-;-;-;-;-;-;-;- + 3238 + 1 1.553 170331.1 1.0 14293 5848 20133 HBL1_DMSO_200M_050219_1,20143 HBL1_DMSO_200M_050219_1,20143,FVNDIFERI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20144 97.61 235.0 258260.0 25 0 51990.0 + -1 AQMEVASFLL 10 104 562.7861514828006 1123.5577500324011 2 562.7875244021416 MULTI CID FTMS 0 0 0 20133 218721.484375 0.6488474410848512 1 -0.1553421020507812 11 Oxidation (M) _AQM(Oxidation (M))EVASFLL_ ENST00000488829.1_1_9:89626569-89628063:+|nuORF;ENSG00000117399|ENST00000310955|CDC20 34.93206674587334 0.2110832994570416 3 [{M(Oxidation (M))|F}E]VAQAS{M(Oxidation (M))|F}{I|L}{I|L} 10 -1 + 55.908 0.0 0.0 4.976 4.976 85.506 0.0 0.0 0.0 4.884381005764311 39.710084362531575 4.884381005764311 10.969100130080562 0 0.6989700043360187 0.0 0.9247425010840048 0.3807196863200844 [{M(Oxidation (M))|F}E]VAQAS{M(Oxidation (M))|F}{I|L}{I|L};[{M(Oxidation (M))|F}E][QA]VAS{M(Oxidation (M))|F}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DP]QAS{M(Oxidation (M))|F}{I|L}{I|L};[{M(Oxidation (M))|F}E]VA[AG]AS{M(Oxidation (M))|F}{I|L}{I|L};[QP]{[{M(Oxidation (M))|F}C]|[YS]}VAS{M(Oxidation (M))|F}{I|L}{I|L};{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))D]VAS{M(Oxidation (M))|F}{I|L}{I|L};{[TV]|[{I|L}S]}[MD]QAS{M(Oxidation (M))|F}{I|L}{I|L};[QP][WY]AS{M(Oxidation (M))|F}{I|L}{I|L};[{M(Oxidation (M))|F}E]V[RN]S{M(Oxidation (M))|F}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[CT]|[{M(Oxidation (M))|F}G]}QAS{M(Oxidation (M))|F}{I|L}{I|L} 4.976;3.9997;3.843;3.8215;3.8022;3.5695;3.4837;3.2209;3.0795;2.9529 -;-;-;-;-;-;-;-;-;- 763 1 1.553 53426.6 1.0 14294 5848 20133 HBL1_DMSO_200M_050219_1,20144 HBL1_DMSO_200M_050219_1,20144,AQMEVASFLL False False AQMEVASFLL 97.609902 562.787524402142 8179583.0 20133.0 ENST00000488829.1_1_9:89626569-89628063:+|nuORF;;ENSG00000117399|ENST00000310955|CDC20 4.142786979675293 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20145 97.62 519.0 103100.0 25 0 7155.4 -1 0 68 1118.661059558392 0 1118.661059558392 PEAK CID FTMS 0 0 0 -1 0 12 3 {I|L}AD 3 -1 7.3071 0.0 0.0 0.3269 0.0 0.0 1347.8952259509654 585.2392672174436 1933.1344931684089 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AD 0.3269 - 73 + 1 1.553 42153.4 1.0 14295 5848 20133 HBL1_DMSO_200M_050219_1,20145 HBL1_DMSO_200M_050219_1,20145, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20146 97.634 800.0 326100.0 25 0 23114.0 + -1 QALDYFLKM 9 199 564.6763712677559 1691.0072844034676 3 564.6768066287041 MULTI CID FTMS 0 0 0 20133 197143.328125 1.0 0 0.0 13 ENSG00000197818|ENST00000361573|SLC9A8;nc|ENSG00000197818|Q9Y2E8-2|SLC9A8 3 {I|L}PECMK{I|L} 7 -1 27.735 0.0 0.0 1.6402 0.0 0.0 858.5930898903138 0.0 858.5930898903138 0.0 15.698256203115584 0.0 0.0 0 0.0 0.0 0.0 0.8497567760783129 {I|L}PECMK{I|L} 1.6402 - 4041 + 1 1.553 194745.1 0.9300000071525574 14296 5848 20133 HBL1_DMSO_200M_050219_1,20146 HBL1_DMSO_200M_050219_1,20146, False False QALDYFLKM 97.634085 564.676806628704 527774.8125 20133.0 ENSG00000197818|ENST00000361573|SLC9A8;;nc|ENSG00000197818|Q9Y2E8-2|SLC9A8 4.919068972269694 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20147 97.648 800.0 126510.0 25 0 7970.6 -1 0 126 1077.490649402142 0 1077.490649402142 PEAK CID FTMS 0 0 0 -1 0 14 3 {I|L}V{I|L}{I|L}E 5 -1 26.828 0.0 0.0 1.2461 0.0 0.0 1355.5099030368376 227.06833826236564 1582.5782412992032 0.0 0.0 0.0 0.0 0 0.0 0.0 1.292674056792244 0.0 {I|L}V{I|L}{I|L}E 1.2461 - 583 + 1 1.553 66432.6 0.7900000214576721 14297 5848 20133 HBL1_DMSO_200M_050219_1,20147 HBL1_DMSO_200M_050219_1,20147, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20148 97.663 800.0 559460.0 25 0 75167.0 + 20417 LLIDELNKL 9 205 535.8263366363128 1069.6381203394255 2 535.8275634646416 MULTI CID FTMS 0 0 0 20133 179832.34375 0.5081811761815609 -1 0.1021804809570312 15 Unmodified _LLIDELNKL_ ENSG00000011426|ENST00000265748|ANLN;nc|ENSG00000011426|Q9NQW6-2|ANLN 147.05914393524117 0.0331831824667063 3 {I|L}{I|L}{I|L}DE{I|L}NK{I|L} 9 0 + 114.69 0.0 0.0 10.722 10.722 94.153 0.0 0.0 0.0 36.47817481888637 8.939466075520741 8.939466075520741 8.939466075520741 0 1.2218487496163564 2.0 0.9731975075880328 2.447621246364342 + + {I|L}{I|L}{I|L}DE{I|L}NK{I|L};{I|L}{I|L}{I|L}DE{I|L}N{I|L}K;{I|L}{I|L}{I|L}DE{I|L}GGK{I|L};{I|L}{I|L}{I|L}DE{I|L}GG{I|L}K;{I|L}{I|L}{I|L}DE{I|L}[KQ]V;{I|L}{I|L}{I|L}DE[KQ]V{I|L};{I|L}{I|L}{I|L}DE[RK]A{I|L};{I|L}{I|L}{I|L}DE[KQ]{I|L}V;{I|L}{I|L}{[HG]|PP}Y{I|L}NK{I|L};{I|L}{I|L}{[HG]|PP}Y{I|L}N{I|L}K 10.722;9.8862;9.8611;9.0253;8.8023;7.9213;7.7986;7.3938;7.2608;6.4251 +;-;-;-;-;-;-;-;-;- + 10059 + 1 1.553 340662.4 0.8700000047683716 14298 5848 20133 HBL1_DMSO_200M_050219_1,20148 HBL1_DMSO_200M_050219_1,20148,LLIDELNKL True True LLIDELNKL 97.662956 535.827563464642 2647748.75 20133.0 ENSG00000011426|ENST00000265748|ANLN;;nc|ENSG00000011426|Q9NQW6-2|ANLN 4.16552488009135 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20149 97.677 800.0 85165.0 25 0 3543.1 + -1 RWCRWCCTRRR 11 122 848.4033080935478 0 848.4033080935478 PEAK CID FTMS 0 0 0 -1 0 16 2 Carbamidomethyl (C) _RWC(Carbamidomethyl (C))RWC(Carbamidomethyl (C))CTRRR_ REV__ENST00000375224.1_1_1:19430583-19430625:-|nuORF 0.0 0.4761840153648598 3 VY{I|L} 3 -1 12.703 0.0 0.0 0.74953 0.0 0.0 1078.4345325915892 238.119928228186 1316.5544608197752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VY{I|L} 0.74953 - 96 + 1 1.553 48377.5 0.6700000166893005 14299 5848 20133 HBL1_DMSO_200M_050219_1,20149 HBL1_DMSO_200M_050219_1,20149,RWCRWCCTRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20150 97.691 800.0 82806.0 25 0 5078.3 45238 YRRWMIRKRMR 11 92 826.4661049975164 1650.9176570618326 2 827.4184448122978 MULTI CID FTMS 0 0 0 20133 108787.3984375 0.8725568738763504 1 -0.1553421020507812 17 Unmodified _YRRWMIRKRMR_ ENSG00000066279|ENST00000367409|ASPM 0.0 0.8751479354844584 3 {[TV]|[{I|L}S]}[YR]W 5 9 15.431 0.0 0.0 0.93467 0.0 0.0 0.0 942.5442799468514 942.5442799468514 12.331655954731248 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}[YR]W 0.93467 - 18 1 1.553 55282.6 0.5899999737739563 14300 5848 20133 HBL1_DMSO_200M_050219_1,20150 HBL1_DMSO_200M_050219_1,20150,YRRWMIRKRMR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20151 97.696 209.0 289520.0 25 0 52448.0 -1 SDLIDSCMKN 10 97 571.2486724076953 1140.4827918821904 2 571.2494384646416 MULTI CID FTMS 0 0 0 20133 120250.5625 0.5067112591557872 -1 0.1021804809570312 18 Oxidation (M) _SDLIDSCM(Oxidation (M))KN_ ENSG00000147081|ENST00000358526|AKAP4;nc|ENSG00000147081|Q5JQC9-2|AKAP4 9.38312468134398 0.6832340498775793 3 PV 2 -1 15.573 0.0 0.0 1.3655 0.0 0.0 926.3506030167592 0.0 926.3506030167592 0.0 -11.126138210185772 -11.126138210185772 0.0 0 0.0 0.0 0.0 0.0 PV 1.3655 - 196 + 1 1.553 52916.4 1.0 14301 5848 20133 HBL1_DMSO_200M_050219_1,20151 HBL1_DMSO_200M_050219_1,20151,SDLIDSCMKN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20152 97.698 99.0 510370.0 25 0 74863.0 + 26534 NVIDYIDTI 9 82 533.278162256438 0 533.2781249880791 PEAK CID FTMS 0 0 0 20133 124171.8828125 0.3392604293866196 -1 0.1021804809570312 19 Unmodified _NVIDYIDTI_ ENSG00000156017|ENST00000376834|CARNMT1 20.453626601364224 0.1969592619112565 3 {M(Oxidation (M))|F}VY 3 7 10.802 0.0 0.0 1.0147 0.0 0.0 359.1931204733549 293.1251619928344 652.3182824661893 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}VY 1.0147 - 90 + 1 1.553 45491.2 1.0 14302 5848 20133 HBL1_DMSO_200M_050219_1,20152 HBL1_DMSO_200M_050219_1,20152,NVIDYIDTI False True NVIDYIDTI 97.697966 533.278124988079 1972166.125 20133.0 ENSG00000156017|ENST00000376834|CARNMT1 3.634757041931152 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20154 97.702 0.81 78040000.0 25 0 11281000.0 + 4022 DALRSILTI 9 71 501.3030275794831 1000.591502225766 2 501.3035766482353 MULTI CID FTMS 0 0 0 20153 66006664.0 0.4825177209403947 2 -0.250244140625 1 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 43.77239144664712 0.0547478964384323 3 [{I|L}T]R[DG]{I|L}{I|L}T{I|L} 9 4 + 67.84 0.0 0.0 6.78 6.78 81.125 0.0 0.0 0.0 5.228787452803374 16.478174818886373 5.228787452803374 1.7609125905568137 0 0.9247425010840048 1.6989700043360187 0.75 0.0 [{I|L}T]R[DG]{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}D{I|L}T{I|L};[{I|L}T]R{[VA]|[{I|L}G]}D{I|L}T{I|L};{[DA]|[EG]}[R{I|L}]S{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}{I|L}DT{I|L};[{I|L}T]R{[VA]|[{I|L}G]}{I|L}DT{I|L};[{I|L}T][VG]{[RE]|[WV]}{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}S{I|L}E{I|L};[{I|L}T]{I|L}{[NV]|[RG]}{I|L}SE{I|L};[{I|L}T]R{[VA]|[{I|L}G]}S{I|L}E{I|L} 6.78;6.604;6.3031;6.2574;5.6772;5.3764;5.2069;5.1775;4.8767;4.8767 -;-;-;+;-;-;-;-;-;- + 497 1 1.542 54012.4 1.0 14303 5849 20153 HBL1_DMSO_200M_050219_1,20154 HBL1_DMSO_200M_050219_1,20154,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20155 97.703 29.0 3426300.0 25 0 454570.0 + 40747 VLIPKLPQL 9 90 510.8440471600711 1019.673541386942 2 510.8441955447197 MULTI CID FTMS 0 0 0 20153 1613224.75 0.6135507946809933 2 -0.250244140625 2 Unmodified _VLIPKLPQL_ ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3 67.34385681178166 0.0221257235307089 3 [{I|L}V]{I|L}PK{I|L}PQ{I|L} 9 0 + 76.653 0.0 0.0 7.5174 7.5174 94.626 0.0 0.0 0.0 58.85999282196177 14.973024840566469 14.973024840566469 16.510234424404686 0 0.7742275032520141 1.6989700043360187 0.0 1.110924374808178 + + [{I|L}V]{I|L}PK{I|L}PQ{I|L};[{I|L}V]{I|L}PK{I|L}P[AG]{I|L} 7.5174;5.8983 +;- + 296 + 1 1.542 82731.9 1.0 14304 5849 20153 HBL1_DMSO_200M_050219_1,20155 HBL1_DMSO_200M_050219_1,20155,VLIPKLPQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20156 97.705 13.0 5925200.0 25 0 993920.0 + 21454 LPHLPSLEI 9 84 509.8000735842508 1017.5855942353016 2 509.8000671267509 MULTI CID FTMS 0 0 0 20153 3984964.0 1.0 0 0.0 3 Unmodified _LPHLPSLEI_ ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2 44.40701690623563 0.0526327925666318 3 [H{I|L}]P{I|L}SP{I|L}E{I|L} 9 4 + 77.788 0.0 0.0 7.6443 7.6443 87.634 0.0 0.0 0.0 12.275844697417853 16.478174818886373 12.275844697417853 4.648167490521175 0 0.7134679910804405 1.154901959985743 0.75 0.0 [H{I|L}]P{I|L}SP{I|L}E{I|L};[H{I|L}]P{I|L}SPE{I|L}{I|L};[H{I|L}]PS{I|L}P{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}SP{I|L}E{I|L};[H{I|L}]PS{I|L}PE{I|L}{I|L};[H{I|L}]P{I|L}SEP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}SPE{I|L}{I|L};[{I|L}P]H{I|L}SP{I|L}E{I|L};[H{I|L}]P{I|L}ESP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S{I|L}P{I|L}E{I|L} 7.6443;7.1876;6.8796;6.438;6.4228;6.1785;5.9812;5.7105;5.7096;5.6733 -;-;-;-;-;-;-;-;-;- 649 1 1.542 61774.2 1.0 14305 5849 20153 HBL1_DMSO_200M_050219_1,20156 HBL1_DMSO_200M_050219_1,20156,LPHLPSLEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20157 97.706 58.0 1054800.0 25 0 225810.0 19184 LEERTWLL 8 75 530.2966119782501 1058.5786710233 2 530.2971069216728 MULTI CID FTMS 0 0 0 20153 707062.6875 0.0930593656901586 5 -0.513336181640625 4 Unmodified _LEERTWLL_ ENSG00000166049|ENST00000370357|PASD1;ENST00000464219.1_1_X:150770025-150841134:+|nuORF;nc|ENSG00000166049|Q8IV76-2|PASD1 21.74664581756881 0.5868176546531598 3 {[QN]|[E{I|L}]|[KN]}E[QA]M{I|L}{I|L}{I|L} 9 4 + 55.569 0.0 0.0 5.2494 5.2494 88.091 0.0 0.0 0.0 15.888174651779964 35.11107503885448 15.888174651779964 20.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 {[QN]|[E{I|L}]|[KN]}E[QA]M{I|L}{I|L}{I|L};{I|L}{I|L}{[ET]|[MV]}{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}{I|L} 5.2494;3.36 -;- 97 1 1.542 51851.4 1.0 14306 5849 20153 HBL1_DMSO_200M_050219_1,20157 HBL1_DMSO_200M_050219_1,20157,LEERTWLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20158 97.708 73.0 720660.0 25 0 216260.0 + 17773 KQFGNILIL 9 75 523.3237407183835 1044.632928503567 2 523.3239013552666 MULTI CID FTMS 0 0 0 20153 534974.4375 0.2858486152210306 2 -0.250244140625 5 Unmodified _KQFGNILIL_ ENSG00000102172|ENST00000404933|SMS;ENST00000436365.1_1_X:47577979-47578291:-|nuORF;nc|ENSG00000102172|P52788-2|SMS 42.09456458481378 0.0639583784996157 3 {I|L}[NG]{I|L}{I|L}{I|L} 6 4 41.643 0.0 0.0 3.9864 0.0 0.0 403.2213612287125 0.0 403.2213612287125 0.0 29.247425010840043 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.8494850021680094 {I|L}[NG]{I|L}{I|L}{I|L} 3.9864 - 88 1 1.542 45984.1 1.0 14307 5849 20153 HBL1_DMSO_200M_050219_1,20158 HBL1_DMSO_200M_050219_1,20158,KQFGNILIL True True KQFGNILIL 97.707768 523.323901355267 22565336.0 20153.0 nc|ENSG00000102172|P52788-2|SMS;;ENST00000436365.1_1_X:47577979-47578291:-|nuORF;;ENSG00000102172|ENST00000404933|SMS 3.348651885986328 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20159 97.719 656.0 403220.0 25 0 88588.0 -1 0 92 739.4024925240246 738.3952160574246 1 739.4036743044853 MULTI CID FTMS 0 0 0 20153 322359.1875 1.0 0 0.0 6 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YS{I|L}{I|L} 6 -1 + 76.643 0.0 0.0 10.38 10.38 96.409 0.0 0.0 0.0 11.034087492996392 16.197887582883936 11.034087492996392 11.034087492996392 0 1.0 1.6989700043360187 1.1237125054200234 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YS{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}S{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{M(Oxidation (M))|F}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SY{I|L}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{I|L};{I|L}MYS{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AY{I|L}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}YM{I|L}{I|L} 10.38;8.8854;8.6159;8.5884;8.2082;7.4708;7.4273;7.0941;7.0196;6.9256 -;-;-;-;-;-;-;-;-;- 437 1 1.542 194484.2 1.0 14308 5849 20153 HBL1_DMSO_200M_050219_1,20159 HBL1_DMSO_200M_050219_1,20159, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20160 97.722 137.0 497080.0 25 0 44421.0 + 8786 EVVKWLDYL 9 104 582.8188036678691 1163.6230544025382 2 582.8185912966728 MULTI CID FTMS 0 0 0 20153 307258.21875 0.2448808763113677 2 -0.250244140625 7 Unmodified _EVVKWLDYL_ ENST00000462279.5_1_5:60188520-60189039:-|nuORF 30.63653989081413 0.1413794767160703 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QG]|[NA]}V{I|L}YVE{I|L} 10 7 + 27.502 0.0 0.0 2.3635 2.3635 67.8 0.0 0.0 0.0 1.1413033536000938 5.868193983395639 1.1413033536000938 1.1413033536000938 0 0.242992819099939 1.0969100130080565 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QG]|[NA]}V{I|L}YVE{I|L};{[TV]|[{I|L}S]}[RV]YGD{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}WV{I|L}YVE{I|L};{[TV]|[{I|L}S]}[RV]YGEVE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T[WK]D{I|L}E{I|L};[{I|L}T]{M(Oxidation (M))|F}[WK]D{I|L}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QG]|[NA]}V{I|L}{NN|[MP]|[D{I|L}]|[EV]}Y{I|L};[{M(Oxidation (M))|F}V][KP]{M(Oxidation (M))|F}GD{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}WV{I|L}{NN|[MP]|[D{I|L}]|[EV]}Y{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QG]|[NA]}V[YV]{I|L}E{I|L} 2.3635;2.2654;2.2378;2.0067;1.6795;1.6795;1.6541;1.5305;1.5285;1.5282 -;-;-;-;-;-;-;-;-;- 503 1 1.542 56088.3 1.0 14309 5849 20153 HBL1_DMSO_200M_050219_1,20160 HBL1_DMSO_200M_050219_1,20160,EVVKWLDYL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20161 97.727 284.0 730330.0 25 0 117460.0 31530 RQKALKKMTL 10 55 608.8829115652522 1215.7512701973044 2 608.8831054568291 MULTI CID FTMS 0 0 0 20153 269956.53125 1.0 0 0.0 8 Unmodified _RQKALKKMTL_ ENST00000265354.5_1_6:43148167-43148299:+|nuORF 1.6526216038709556 0.7189921496796233 3 {I|L} 1 9 12.764 0.0 0.0 1.0499 0.0 0.0 1084.6563280359746 0.0 1084.6563280359746 0.0 9.46345375847709 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0499 + + 17 + 1 1.542 155628.4 1.0 14310 5849 20153 HBL1_DMSO_200M_050219_1,20161 HBL1_DMSO_200M_050219_1,20161,RQKALKKMTL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20162 97.734 400.0 447550.0 25 0 59550.0 + 11556 GIVDILHKL 9 137 336.5464835476228 1006.6176212430682 3 336.5463744997978 MULTI CID FTMS 0 0 0 20153 267353.46875 0.6435876476586899 -2 0.2575225830078125 9 Unmodified _GIVDILHKL_ ENSG00000114098|ENST00000469044|ARMC8;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;ENST00000466762.1_1_3:137982955-138014731:+|nuORF;nc|ENSG00000114098|Q8IUR7-2|ARMC8;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8;nc|ENSG00000114098|Q8IUR7-8|ARMC8 29.081581746732265 0.1611639662936252 3 {[VA]|[{I|L}G]}VD{I|L}{I|L}HK{I|L} 9 0 + 69.074 0.0 0.0 6.862 6.862 79.333 0.0 0.0 0.0 40.73587279389014 9.292843786802408 9.292843786802408 0.5237875363565934 0 0.2742275032520141 2.0 0.3807196863200844 0.2059771852360797 + + {[VA]|[{I|L}G]}VD{I|L}{I|L}HK{I|L};{[VA]|[{I|L}G]}V{I|L}D{I|L}HK{I|L};{[VA]|[{I|L}G]}{I|L}VD{I|L}HK{I|L};{NN|[MP]|[D{I|L}]|[EV]}[H{I|L}]K{I|L}{I|L}R;[HK]A[RN]{I|L}{I|L}R 6.862;6.8099;6.1327;1.4169;0.45131 +;-;-;-;- + 336 + 1 1.542 146377.9 1.0 14311 5849 20153 HBL1_DMSO_200M_050219_1,20162 HBL1_DMSO_200M_050219_1,20162,GIVDILHKL False True GIVDILHKL 97.734364 336.546374499798 4985126.0 20153.0 nc|ENSG00000114098|Q8IUR7-2|ARMC8;;nc|ENSG00000114098|Q8IUR7-8|ARMC8;;nc|ENSG00000114098|Q8IUR7-3|ARMC8;;ENSG00000114098|ENST00000469044|ARMC8;;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;;nc|ENSG00000114098|Q8IUR7-7|ARMC8;;ENST00000466762.1_1_3:137982955-138014731:+|nuORF 4.581347624460856 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20163 97.737 122.0 965470.0 25 0 105220.0 + + 14827 GILLRLPQV 9 130 505.2711536296359 1008.5277543260718 2 505.2706786990166 MULTI CID FTMS 0 0 0 20153 236060.609375 0.5180716128293774 5 -0.513336181640625 10 Unmodified _ILFNDQFI_ nc|ENSG00000163660|Q9UK58-5|CCNL1;nc|ENSG00000163660|Q9UK58-4|CCNL1;ENST00000466101.1_1_3:156877139-156877916:-|nuORF;nc|ENSG00000221978|Q96S94-2|CCNL2;ENST00000471044.1_1_3:156876653-156877916:-|nuORF;ENSG00000221978|ENST00000400809|CCNL2;nc|ENSG00000221978|Q96S94-5|CCNL2;nc|ENSG00000221978|Q96S94-4|CCNL2;ENSG00000163660|ENST00000295926|CCNL1;nc|ENSG00000163660|Q9UK58-6|CCNL1 17.086550045450526 0.6584923310065985 3 {[VA]|[{I|L}G]}{I|L}N[{I|L}T]{I|L}{[YC]|[HE]} 9 -1 + 29.178 0.0 0.0 2.8931 2.8931 75.391 0.0 0.0 0.0 10.84553029807644 2.7343241947517107 2.7343241947517107 6.044256385165955 0 0.0 2.0 0.0 0.5866968715561641 {[VA]|[{I|L}G]}{I|L}N[{I|L}T]{I|L}{[YC]|[HE]};{[VA]|[{I|L}G]}{I|L}[{I|L}V]G[TA]{[YC]|[HE]};{[VA]|[{I|L}G]}{I|L}[{I|L}V][QT]{[YC]|[HE]};{[VA]|[{I|L}G]}{I|L}[R{I|L}]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M];{I|L}{I|L}GN[{I|L}T]{I|L}{[YC]|[HE]};{I|L}{I|L}[R{I|L}]G{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M];{[VA]|[{I|L}G]}{I|L}GG[{I|L}T]{I|L}{[YC]|[HE]};{[VA]|[{I|L}G]}[RN][RK]{[YC]|[HE]};{[VA]|[{I|L}G]}G{[VA]|[{I|L}G]}[{I|L}T]{I|L}{[YC]|[HE]};{I|L}{I|L}G[{I|L}V]G[TA]{[YC]|[HE]} 2.8931;2.2938;1.9686;1.9675;1.5524;1.3983;1.3983;1.2599;1.0335;0.95305 -;-;-;-;-;-;-;-;-;- 816 1 1.542 91750.3 1.0 14312 5849 20153 HBL1_DMSO_200M_050219_1,20163 HBL1_DMSO_200M_050219_1,20163,ILFNDQFI False False GILLRLPQV 97.736878 505.270678699017 6222417.0 20153.0 nc|ENSG00000163660|Q9UK58-5|CCNL1;;nc|ENSG00000163660|Q9UK58-4|CCNL1;;ENST00000466101.1_1_3:156877139-156877916:-|nuORF;;nc|ENSG00000221978|Q96S94-2|CCNL2;;ENST00000471044.1_1_3:156876653-156877916:-|nuORF;;ENSG00000221978|ENST00000400809|CCNL2;;nc|ENSG00000221978|Q96S94-5|CCNL2;;nc|ENSG00000221978|Q96S94-4|CCNL2;;ENSG00000163660|ENST00000295926|CCNL1;;nc|ENSG00000163660|Q9UK58-6|CCNL1 3.6708978017171225 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20164 97.741 247.0 971910.0 25 0 106570.0 + 29324 QILTVLPRL 9 147 526.8449349458746 1051.675316958549 2 526.8463622927666 MULTI CID FTMS 0 0 0 20153 193003.328125 0.134577980232021 -2 0.2575225830078125 11 Unmodified _QILTVLPRL_ ENST00000509144.2_1_8:106809432-107072670:-|nuORF;ENST00000520078.5_1_8:106810397-107072670:-|nuORF;ENST00000520594.5_1_8:106799777-107072670:-|nuORF 92.4914307365334 0.0139747738690111 3 Q{I|L}{I|L}S{I|L}{I|L}PR{I|L} 9 2 + 93.802 0.0 0.0 8.9193 8.9193 85.298 0.0 0.0 0.0 73.03173680238777 14.09256854528806 14.09256854528806 1.7609125905568137 0 0.8494850021680094 2.0 0.7059771852360797 1.1237125054200234 Q{I|L}{I|L}S{I|L}{I|L}PR{I|L};Q{I|L}{I|L}S{I|L}P{I|L}R{I|L};Q{I|L}{I|L}{I|L}S{I|L}PR{I|L};Q{I|L}{I|L}{I|L}SP{I|L}R{I|L};Q{I|L}{I|L}P[{I|L}T]VR{I|L};Q{I|L}{I|L}{I|L}[TP]VR{I|L};Q{I|L}{I|L}P{[TV]|[{I|L}S]}{I|L}R{I|L};KA{I|L}E{I|L}{I|L}PR{I|L};KA{I|L}E{I|L}P{I|L}R{I|L};KA{I|L}{I|L}E{I|L}PR{I|L} 8.9193;8.7518;8.7401;8.5727;7.567;7.4364;7.2321;4.5702;4.4028;3.8303 -;-;-;-;-;-;-;-;-;- 984 + 1 1.542 184659.7 1.0 14313 5849 20153 HBL1_DMSO_200M_050219_1,20164 HBL1_DMSO_200M_050219_1,20164,QILTVLPRL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20165 97.745 211.0 417670.0 25 0 35770.0 + 23276 LSWNKTVEL 9 101 545.3003992159358 1088.5862454986716 2 545.3009521365166 MULTI CID FTMS 0 0 0 20153 208142.484375 0.2281961322839842 16 -1.8079376220703125 12 Unmodified _LSWNKTVEL_ ENSG00000196358|ENST00000393229|NTNG2;nc|ENSG00000196358|Q96CW9-2|NTNG2 39.94969957227396 0.0757326808254658 3 {[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L} 9 3 + 60.043 0.0 0.0 5.5157 5.5157 80.581 0.0 0.0 0.0 3.976054209789723 16.478174818886373 3.976054209789723 3.976054209789723 0 0.2742275032520141 1.0969100130080565 1.046771660839286 0.0 {[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TVE{I|L};[R{M(Oxidation (M))|F}][DP]{I|L}TVE{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VE{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}K[NS]{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[VP]V{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}K[NS]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}[VP]V{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}[WE]{I|L}K[NS]{I|L};{[TV]|[{I|L}S]}[WE][VP]V{M(Oxidation (M))|F}{I|L} 5.5157;5.1504;3.7515;3.0624;2.9707;2.9707;2.6054;2.6054;2.6054;2.6054 -;-;-;-;-;-;-;-;-;- 621 1 1.542 80784.8 1.0 14314 5849 20153 HBL1_DMSO_200M_050219_1,20165 HBL1_DMSO_200M_050219_1,20165,LSWNKTVEL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20166 97.749 193.0 539400.0 25 0 45169.0 -1 LINFMKML 8 131 513.2818628465604 1024.5491727599208 2 513.2818481326103 MULTI CID FTMS 0 0 0 20153 190055.140625 0.3507135180096231 1 -0.1439285278320312 13 Oxidation (M) _LINFM(Oxidation (M))KML_ nc|ENSG00000254838|Q7Z2Y8|GVINP1 14.581692164780916 0.6954967302934248 3 {I|L}{I|L}[YE]M{I|L}M{I|L} 8 -1 {I|L}{I|L}[YE]M{I|L}M + + 15.485 3.0463 0.34096 1.5114 1.5114 48.536 0.0 0.0 0.0 0.0 -0.7133375178436587 -0.7133375178436587 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}[YE]M{I|L}M{I|L} 1.5114 - 1086 + 1 1.542 83520.8 1.0 14315 5849 20153 HBL1_DMSO_200M_050219_1,20166 HBL1_DMSO_200M_050219_1,20166,LINFMKML False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 20167 97.764 800.0 176810.0 25 0 7674.9 + -1 NFDVREIVNNI 11 182 667.0175746493446 1998.0308945482336 3 667.3499023318291 MULTI CID FTMS 0 0 0 20153 189769.59375 1.0 0 0.0 14 nc|ENSG00000131747|P11388-4|TOP2A;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A 3 NDV{I|L}[HN][YT]N{I|L} 10 -1 26.085 0.0 0.0 1.3055 0.0 0.0 796.4501278942404 0.0 796.4501278942404 0.0 12.813864403416542 0.0 0.0 0 0.0 0.0 0.0 1.0501648626366045 NDV{I|L}[HN][YT]N{I|L} 1.3055 - 5036 + 1 1.542 106023.5 0.9300000071525574 14316 5849 20153 HBL1_DMSO_200M_050219_1,20167 HBL1_DMSO_200M_050219_1,20167, False False NFDVREIVNNI 97.764211 666.8489 884590.4375 20153.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 5.262550354003906 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20168 97.778 800.0 306220.0 25 0 18203.0 + 3208 AWIDAEVTEF 10 211 590.7795338422033 0 590.7796508669853 PEAK CID FTMS 0 0 0 20153 163934.265625 1.0 0 0.0 15 Unmodified _AWIDAEVTEF_ ENSG00000135763|ENST00000258243|URB2 24.020572477871973 0.2658879206942018 3 YE{I|L}{M(Oxidation (M))|F} 4 8 14.157 0.0 0.0 1.2002 0.0 0.0 240.0379636065565 384.2246492975219 624.2626129040784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 YE{I|L}{M(Oxidation (M))|F} 1.2002 - 660 + 1 1.542 179971.9 0.8899999856948853 14317 5849 20153 HBL1_DMSO_200M_050219_1,20168 HBL1_DMSO_200M_050219_1,20168,AWIDAEVTEF False True AWIDAEVTEF 97.778043 590.779650866985 1532725.875 20153.0 ENSG00000135763|ENST00000258243|URB2 2.6851603984832764 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20169 97.792 800.0 132490.0 25 0 9564.5 -1 0 100 687.8339866364652 2747.3068406794605 4 688.0861083865166 MULTI CID FTMS 0 0 0 20153 166181.203125 0.5554470604320682 1 -0.1439285278320312 16 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 74.434 0.0 0.0 2.7093 0.0 0.0 0.0 1706.690482607448 1706.690482607448 63.46455617469936 0.0 0.0 0.0 0 1.924742501084005 1.5228787452803376 0.25 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.7093 - 722 1 1.542 81625.6 0.8899999856948853 14318 5849 20153 HBL1_DMSO_200M_050219_1,20169 HBL1_DMSO_200M_050219_1,20169, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20170 97.807 800.0 224040.0 25 0 23489.0 + 16032 ITIPEIATSEL 11 180 593.8315942634963 1185.6486355937925 2 593.8295776247978 MULTI CID FTMS 0 0 0 20153 154147.046875 0.2780278750153733 -6 0.7192153930664062 17 Unmodified _ITIPEIATSEL_ ENSG00000153107|ENST00000341068|ANAPC1 99.79894945604345 0.0003267469284895 3 {[QN]|[E{I|L}]|[KN]}PAT{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L} 11 7 + 51.553 0.0 0.0 4.348 4.348 78.679 0.0 0.0 0.0 16.93872181398467 9.4986545814496 9.4986545814496 5.793037728310253 0 0.3182503180159344 1.3010299956639813 1.5138793319624575 0.0 {[QN]|[E{I|L}]|[KN]}PAT{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L};{[QN]|[E{I|L}]|[KN]}PT{I|L}A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L};{[QN]|[E{I|L}]|[KN]}PTA{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L};{[QN]|[E{I|L}]|[KN]}P{I|L}TA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L};{[QN]|[E{I|L}]|[KN]}PAT{I|L}[W{M(Oxidation (M))|F}]P{I|L};{[QN]|[E{I|L}]|[KN]}PA{I|L}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L};{[QN]|[E{I|L}]|[KN]}PA{I|L}[RD]YP{I|L};{[QN]|[E{I|L}]|[KN]}PAKK[YG]AP{I|L};{[QN]|[E{I|L}]|[KN]}PA[VP][HD]VP{I|L};{[QN]|[E{I|L}]|[KN]}P[PG]{I|L}[HD]VP{I|L} 4.348;3.8594;3.8175;3.7336;3.6891;3.6724;3.391;3.3416;3.3378;3.3378 -;-;-;-;-;-;-;-;-;- 6321 1 1.542 133840.2 0.8600000143051147 14319 5849 20153 HBL1_DMSO_200M_050219_1,20170 HBL1_DMSO_200M_050219_1,20170,ITIPEIATSEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20171 97.813 319.0 310060.0 25 0 42868.0 23610 LTPQYLALL 9 128 516.3107676785994 1030.6069824239987 2 516.3122436404228 MULTI CID FTMS 0 0 0 20153 150786.5 0.3096231436813763 -5 0.5627899169921875 18 Unmodified _LTPQYLALL_ ENSG00000048740|ENST00000633077|CELF2;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2 29.081581746732265 0.1611639662936252 3 [{I|L}T]PQY{I|L}VVV 9 3 + 51.812 0.0 0.0 5.0274 5.0274 78.831 0.0 0.0 0.0 3.941596916374479 7.504311474114331 3.941596916374479 3.941596916374479 0 0.7742275032520141 1.0 1.27049241580378 0.3494850021680094 [{I|L}T]PQY{I|L}VVV;{[DA]|[EG]}{I|L}[R{M(Oxidation (M))|F}]{I|L}VVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}T{I|L}VVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[SG]{I|L}T{I|L}VVV;[{I|L}T]PQ{I|L}YVVV;[Q{I|L}]{M(Oxidation (M))|F}{I|L}T{I|L}VVV;[{I|L}P]TQY{I|L}VVV;[{I|L}T]P[AG]Y{I|L}VVV;{[QN]|[E{I|L}]|[KN]}G[R{M(Oxidation (M))|F}]{I|L}VVV;AAV{M(Oxidation (M))|F}{I|L}T{I|L}VVV 5.0274;4.6449;4.6125;4.3554;4.195;3.9958;3.7963;3.7948;3.7753;3.6268 -;-;-;-;-;-;-;-;-;- 1154 1 1.542 81651.6 1.0 14320 5849 20153 HBL1_DMSO_200M_050219_1,20171 HBL1_DMSO_200M_050219_1,20171,LTPQYLALL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20172 97.827 800.0 196200.0 25 0 4160.3 -1 0 140 1177.6379717791797 0 1177.639453113079 PEAK CID FTMS 0 0 0 20153 124649.8984375 1.0 0 0.0 19 3 MVQVY{I|L}ES 8 -1 52.192 0.0 0.0 2.2179 0.0 0.0 1176.6926172870717 224.10457788638908 1400.7971951734603 0.0 0.0 0.0 0.0 0 0.0 0.0 1.5356668758921828 0.3494850021680094 MVQVY{I|L}ES 2.2179 - 6388 + 1 1.542 93386.8 0.6499999761581421 14321 5849 20153 HBL1_DMSO_200M_050219_1,20172 HBL1_DMSO_200M_050219_1,20172, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20173 97.842 800.0 215610.0 25 0 25781.0 38439 TRSPFPSQH 9 125 1056.5267113840089 1055.519434917409 1 1058.832446277142 MULTI CID FTMS 0 0 0 -1 0 20 Unmodified _TRSPFPSQH_ DMD|p.S1492Efs*19|1|0.36|ENSG00000198947|chrX:32389546-32389547|-/T|frameshift_variant;ENSG00000198947|ENST00000357033|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532|DMD 18.1463463914782 0.3454829746528889 3 [WP]S{I|L}{NN|[MP]|[D{I|L}]|[EV]}[TP]Q 9 6 + 33.864 0.0 0.0 3.2083 3.2083 75.317 0.0 0.0 0.0 5.280287236002437 0.0 0.0 5.280287236002437 0 0.0 1.5228787452803376 0.805462187404089 0.0 [WP]S{I|L}{NN|[MP]|[D{I|L}]|[EV]}[TP]Q;QP{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}SHQ;[PS]W{I|L}{NN|[MP]|[D{I|L}]|[EV]}[TP]Q;[PS]YSYRRQ;[WP][{I|L}P]MS[TP]Q;[WP][W{I|L}]E[TP]Q;[WP]E[{I|L}A]D[TP]K;[WP]E[W{I|L}][TP]Q;[WP]E{[VA]|[{I|L}G]}E[TP]K;[PS]YSQH[{I|L}P]Q 3.2083;2.7081;2.5984;2.5927;2.4799;2.4757;2.2339;2.1905;2.1421;2.0908 -;-;-;-;-;-;-;-;-;- 1743 1 1.542 110171.8 0.699999988079071 14322 5849 20153 HBL1_DMSO_200M_050219_1,20173 HBL1_DMSO_200M_050219_1,20173,TRSPFPSQH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20175 97.847 61.0 1030400.0 25 0 186560.0 -1 SIIEKGEEHC 10 82 601.2770477783645 1200.5395426235289 2 601.2778198122978 MULTI CID FTMS 0 0 0 20174 785112.875 0.314548238452581 2 -0.274749755859375 1 Carbamidomethyl (C) _SIIEKGEEHC(Carbamidomethyl (C))_ ENST00000497997.1_1_3:119393998-119394220:-|nuORF 24.020572477871973 0.4289996903560794 3 {[TV]|[{I|L}S]}{I|L}E 4 -1 38.43 0.0 0.0 3.201 0.0 0.0 0.0 755.2723666804226 755.2723666804226 11.192803136799157 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.5242275032520141 0.0 {[TV]|[{I|L}S]}{I|L}E 3.201 + + 222 1 1.554 48978.0 1.0 14323 5850 20174 HBL1_DMSO_200M_050219_1,20175 HBL1_DMSO_200M_050219_1,20175,SIIEKGEEHC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20176 97.848 58.0 1802000.0 25 0 250360.0 + 27761 PLPLPPLAL 9 97 465.8046970508198 929.5948411684396 2 465.8050109744072 MULTI CID FTMS 0 0 0 20174 1152630.125 0.3894901650897052 -1 0.1439285278320312 2 Unmodified _PLPLPPLAL_ ENST00000591090.5_1_19:12859061-12859118:+|nuORF 56.04830969593885 0.0282699710924866 3 {I|L}{I|L}PPPP{I|L}A{I|L} 9 2 + 55.473 0.0 0.0 5.9674 5.9674 90.554 0.0 0.0 0.0 26.598878259206835 12.496681312452791 12.496681312452791 20.00508444608478 0 1.341129063296272 2.0 0.0 0.0 {I|L}{I|L}PPPP{I|L}A{I|L};{I|L}{I|L}[YK]P{I|L}A{I|L} 5.9674;3.8154 -;- 393 + 1 1.554 83932.2 1.0 14324 5850 20174 HBL1_DMSO_200M_050219_1,20176 HBL1_DMSO_200M_050219_1,20176,PLPLPPLAL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20177 97.85 102.0 1593600.0 25 0 162830.0 + 20036 LIPDIDLKL 9 117 520.322988589831 1038.6314242464618 2 520.3235351443291 MULTI CID FTMS 0 0 0 20174 644413.8125 0.2298033109118839 -3 0.4014511108398437 3 Unmodified _LIPDIDLKL_ ENSG00000173473|ENST00000254480|SMARCC1 39.94969957227396 0.0757326808254658 3 {I|L}{I|L}PD{I|L}D{I|L}K{I|L} 9 0 + 68.911 0.0 0.0 6.6348 6.6348 92.236 0.0 0.0 0.0 8.93553046518285 14.09256854528806 8.93553046518285 16.74865027867405 0 0.3807196863200844 2.0 0.7302046884880937 0.0 + + {I|L}{I|L}PD{I|L}D{I|L}K{I|L};{I|L}{I|L}{I|L}[DP]D{I|L}K{I|L};[DP]{I|L}D{I|L}K{I|L}{I|L}{I|L};{I|L}{I|L}DPDK{I|L}{I|L}{I|L};{I|L}{I|L}DPSR{I|L}{I|L}{I|L};[DP]{I|L}{I|L}SR{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}PD{I|L}K{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}DP{I|L}K{I|L}{I|L}{I|L};{I|L}{I|L}DPS[VG]{I|L}{I|L}{I|L};[DP]{I|L}{I|L}S[VG]{I|L}{I|L}{I|L} 6.6348;5.0222;4.3696;3.4698;3.18;2.5342;2.4881;2.3948;2.2934;1.6477 +;-;-;-;-;-;-;-;-;- + 540 + 1 1.554 130921.0 1.0 14325 5850 20174 HBL1_DMSO_200M_050219_1,20177 HBL1_DMSO_200M_050219_1,20177,LIPDIDLKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20178 97.852 55.0 930480.0 25 0 79302.0 + 26539 NVIGEPFLNV 10 90 551.3011251854209 0 551.3009521365166 PEAK CID FTMS 0 0 0 20174 515174.84375 0.535077311904961 -1 0.1439285278320312 4 Unmodified _NVIGEPFLNV_ ENSG00000104738|ENST00000649973|MCM4 26.268140514670165 0.2477853539698685 3 Q{M(Oxidation (M))|F}WS 4 9 21.23 0.0 0.0 1.929 0.0 0.0 231.16015945111675 318.1584566705688 549.3186161216855 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 Q{M(Oxidation (M))|F}WS 1.929 - 361 + 1 1.554 48186.4 1.0 14326 5850 20174 HBL1_DMSO_200M_050219_1,20178 HBL1_DMSO_200M_050219_1,20178,NVIGEPFLNV False True NVIGEPFLNV 97.851811 551.300952136517 14169473.0 20174.0 ENSG00000104738|ENST00000649973|MCM4 6.411025047302246 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20179 97.855 188.0 418450.0 25 0 78391.0 + 9859 FPFGYVSNI 9 106 522.2638698765668 1042.5131868199337 2 522.2635375857353 MULTI CID FTMS 0 0 0 20174 328489.5 0.4973504548735136 -1 0.1439285278320312 5 Unmodified _FPFGYVSNI_ ENSG00000159259|ENST00000314103|CHAF1B;ENST00000481458.1_1_21:37771819-37785123:+|nuORF 46.92087301778293 0.0471210510596396 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}VSN{I|L} 9 2 + 56.775 0.0 0.0 5.446 5.446 81.342 0.0 0.0 0.0 24.76203644159419 42.59250301305293 24.76203644159419 4.771212547196626 0 0.5682503180159344 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}VSN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{M(Oxidation (M))|F}YVSN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GYV{M(Oxidation (M))|F}SN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}GYVSN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[PG]QVDN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[TA]{M(Oxidation (M))|F}SN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NP]QVDN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]{M(Oxidation (M))|F}DN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[YK]DN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YR]{M(Oxidation (M))|F}[WK] 5.446;4.9883;4.9883;4.4664;3.2355;2.9566;2.8977;2.6882;2.3352;2.2747 -;-;-;+;-;-;-;-;-;- + 949 1 1.554 69376.8 1.0 14327 5850 20174 HBL1_DMSO_200M_050219_1,20179 HBL1_DMSO_200M_050219_1,20179,FPFGYVSNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20180 97.861 319.0 392210.0 25 0 43052.0 + 39402 VALARALFI 9 109 487.3132346150024 972.6119162968048 2 487.3135253787041 MULTI CID FTMS 0 0 0 20174 280509.46875 0.37123175883058 1 -0.1063156127929687 6 Unmodified _VALARALFI_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 61.357469665136826 0.0253304979873734 3 {[VA]|[{I|L}G]}{I|L}ARA{I|L}{M(Oxidation (M))|F}{I|L} 9 0 + 59.86 0.0 0.0 6.1546 6.1546 89.369 0.0 0.0 0.0 9.594465368295886 21.39914847179636 9.594465368295886 10.681951775701926 0 1.6549471895720984 1.6989700043360187 0.0 0.0 + + {[VA]|[{I|L}G]}{I|L}ARA{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]RA{I|L}G{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]RAVA{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]RA{I|L}AV{M(Oxidation (M))|F}{I|L};[{I|L}A]VARA{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]RA{I|L}{M(Oxidation (M))|F}AV{I|L};[{I|L}A]RA{I|L}A{M(Oxidation (M))|F}V{I|L};[{I|L}A]R[Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]RA{M(Oxidation (M))|F}{I|L}AV{I|L} 6.1546;5.0563;4.8753;4.4373;4.0792;3.6137;3.6137;3.1353;3.0543 +;-;-;-;-;-;-;-;- + 274 1 1.554 99374.2 1.0 14328 5850 20174 HBL1_DMSO_200M_050219_1,20180 HBL1_DMSO_200M_050219_1,20180,VALARALFI True True VALARALFI 97.861225 487.313525378704 11007438.0 20174.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2 4.474698543548584 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20181 97.865 196.0 261090.0 25 0 16358.0 -1 0 64 791.372936740873 2371.0969808228188 3 791.7070190310478 MULTI CID FTMS 0 0 0 20174 245001.078125 0.2546674921235329 14 -1.5363693237304688 7 3 {[HG]|PP}APPPPG 8 -1 24.87 0.0 0.0 1.0489 0.0 0.0 0.0 1657.6987013640876 1657.6987013640876 -1.1480289235345251 0.0 -1.1480289235345251 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}APPPPG 1.0489 - 850 1 1.554 45031.0 1.0 14329 5850 20174 HBL1_DMSO_200M_050219_1,20181 HBL1_DMSO_200M_050219_1,20181, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20182 97.87 272.0 365060.0 25 0 78930.0 + 32120 RVMPSSFFL 9 109 542.2865869706392 1082.5586210080785 2 542.2869750857353 MULTI CID FTMS 0 0 0 20174 211080.296875 0.6227947350713134 1 -0.1063156127929687 8 Unmodified _RVMPSSFFL_ ENSG00000143155|ENST00000367833|TIPRL 27.628801355627647 0.1796483985696185 3 S{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 4 5 37.933 0.0 0.0 3.504 0.0 0.0 570.2982655255875 0.0 570.2982655255875 0.0 19.32657381684922 0.0 0.0 0 0.5 0.0 0.75 0.0 + S{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 3.504 + + 307 1 1.554 80621.7 1.0 14330 5850 20174 HBL1_DMSO_200M_050219_1,20182 HBL1_DMSO_200M_050219_1,20182,RVMPSSFFL False True RVMPSSFFL 97.87005 542.286975085735 3963675.5 20174.0 ENSG00000143155|ENST00000367833|TIPRL 6.0955766042073565 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20183 97.875 246.0 153610.0 25 0 7139.4 + 15106 IMRFGFWFVNL 11 82 715.3747615404125 1428.7349701476248 2 715.8776122927666 MULTI CID FTMS 0 0 0 20174 169918.375 0.2179616964764237 1 -0.1063156127929687 9 Unmodified _IMRFGFWFVNL_ REV__ENST00000283875.5_1_3:120501221-120501314:+|nuORF 5.731851221503515 0.8481046878870278 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NV{I|L} 5 -1 20.713 0.0 0.0 1.4498 0.0 0.0 0.0 855.3810518854124 855.3810518854124 8.234002963358405 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NV{I|L} 1.4498 - 291 + 1 1.554 32724.6 1.0 14331 5850 20174 HBL1_DMSO_200M_050219_1,20183 HBL1_DMSO_200M_050219_1,20183,IMRFGFWFVNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20184 97.878 187.0 570750.0 25 0 65369.0 + 11557 GIVDILHKL 9 118 504.3152773692402 1006.6160018052803 2 504.3155395388603 MULTI CID FTMS 0 0 0 20174 152883.1875 0.6690707430568139 1 -0.1063156127929687 10 Unmodified _GIVDILHKL_ ENSG00000114098|ENST00000469044|ARMC8;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;ENST00000466762.1_1_3:137982955-138014731:+|nuORF;nc|ENSG00000114098|Q8IUR7-2|ARMC8;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8;nc|ENSG00000114098|Q8IUR7-8|ARMC8 34.40172386719151 0.1061884637610825 3 {[VA]|[{I|L}G]}VD{I|L}KH{I|L}{I|L} 9 2 + 66.111 0.0 0.0 6.5676 6.5676 79.149 0.0 0.0 0.0 49.23438972698683 12.580692997033722 12.580692997033722 0.9691001300805624 0 0.7059771852360797 2.0 0.0 0.0 {[VA]|[{I|L}G]}VD{I|L}KH{I|L}{I|L};{[VA]|[{I|L}G]}VD{I|L}{I|L}HK{I|L};{[VA]|[{I|L}G]}V[{I|L}A][TA]H{I|L}{I|L};{[VA]|[{I|L}G]}V{[QG]|[NA]}VPPK{I|L};{[VA]|[{I|L}G]}[KP][KS]HK{I|L};{[VA]|[{I|L}G]}V{[QG]|[NA]}VPKP{I|L};{[VA]|[{I|L}G]}[NG]{I|L}VPPK{I|L};{[VA]|[{I|L}G]}{[{M(Oxidation (M))|F}H]|[RQ]}VPPK{I|L};{[VA]|[{I|L}G]}[KP][R{I|L}]NP{I|L};{[VA]|[{I|L}G]}[NG]{I|L}VPKP{I|L} 6.5676;6.4714;3.3429;2.9393;2.8968;2.6857;2.3412;2.2904;2.1692;2.0876 -;+;-;-;-;-;-;-;-;- + 1351 + 1 1.554 83791.2 1.0 14332 5850 20174 HBL1_DMSO_200M_050219_1,20184 HBL1_DMSO_200M_050219_1,20184,GIVDILHKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20185 97.892 800.0 240310.0 25 0 11726.0 -1 0 134 1186.5547871823137 2371.095021431427 2 1187.554370105267 MULTI CID FTMS 0 0 0 20174 144750.390625 0.5350217080545037 13 -1.390594482421875 11 3 [QP][QT]PPPN{I|L} 9 -1 42.954 0.0 0.0 1.8116 0.0 0.0 0.0 1395.5492200000397 1395.5492200000397 20.819328110613355 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 1.7302046884880935 [QP][QT]PPPN{I|L} 1.8116 - 3459 1 1.554 113443.8 0.8399999737739563 14333 5850 20174 HBL1_DMSO_200M_050219_1,20185 HBL1_DMSO_200M_050219_1,20185, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20186 97.906 800.0 207270.0 25 0 21707.0 + 27724 PLLRLPVL 8 142 460.8189768836969 919.6234008341938 2 460.8184997439384 MULTI CID FTMS 0 0 0 20174 142885.734375 0.226856834025016 6 -0.6786270141601562 12 Unmodified _PLLRLPVL_ ENST00000532529.1_1_11:101827229-101827448:+|nuORF 46.92087301778293 0.1537303740847981 3 {I|L}PPV{I|L}[R{I|L}]{I|L} 8 5 + 74.404 0.0 0.0 8.0907 8.0907 95.027 0.0 0.0 0.0 52.254027259619626 18.218421963928435 18.218421963928435 12.730012720637376 0 0.7742275032520141 2.0 0.0 0.6307196863200843 {I|L}PPV{I|L}[R{I|L}]{I|L};{I|L}P{I|L}[VP][R{I|L}]{I|L};{I|L}P{I|L}R{I|L}[VP]{I|L};{I|L}P{I|L}R{I|L}[{I|L}P]V;[{I|L}P]{I|L}R{I|L}[VP]{I|L};{I|L}{I|L}P[VP][R{I|L}]{I|L};[{I|L}P]V{[VA]|[{I|L}G]}{I|L}[VP]{I|L};[{I|L}P]{I|L}RP[{I|L}V]{I|L};{I|L}{I|L}PR{I|L}[VP]{I|L};[{I|L}P]V{[VA]|[{I|L}G]}P[{I|L}V]{I|L} 8.0907;6.7064;6.1441;5.0716;4.3768;3.8665;3.8162;3.5974;3.3042;3.0368 -;-;-;-;+;-;-;-;-;- + 265 + 1 1.554 127993.8 0.550000011920929 14334 5850 20174 HBL1_DMSO_200M_050219_1,20186 HBL1_DMSO_200M_050219_1,20186,PLLRLPVL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20187 97.91 239.0 829370.0 25 0 84188.0 + -1 HQLFHIFVV 9 135 570.3232172872647 1138.6318816413293 2 570.3219482302666 MULTI CID FTMS 0 0 0 20174 130100.65625 0.5961959334091798 -1 0.1439285278320312 13 Oxidation (M) _LLPM(Oxidation (M))PTEPLL_ ENSG00000006831|ENST00000357103|ADIPOR2 18.13498045792455 0.5432546531930572 3 [{I|L}P][WE]H{I|L}{M(Oxidation (M))|F}VV 9 -1 + 45.408 0.0 0.0 3.9879 3.9879 84.13 0.0 0.0 0.0 16.050340602886592 20.32371591089755 16.050340602886592 20.4972646727866 0 0.3238194166937225 1.5228787452803376 0.3807196863200844 0.0 [{I|L}P][WE]H{I|L}{M(Oxidation (M))|F}VV;{I|L}{I|L}{I|L}[YC(Carbamidomethyl (C))]{I|L}{M(Oxidation (M))|F}VV;[HQ]{I|L}{M(Oxidation (M))|F}H{I|L}{M(Oxidation (M))|F}VV;{[QN]|[E{I|L}]|[KN]}[WP]H{I|L}{M(Oxidation (M))|F}VV;[HA]G{I|L}{M(Oxidation (M))|F}H{I|L}{M(Oxidation (M))|F}VV;[KG][PG]WH{I|L}{M(Oxidation (M))|F}VV;VV{I|L}D{[C(Carbamidomethyl (C))G]|[NC]}[HK]V{I|L};{[VA]|[{I|L}G]}[HA]{M(Oxidation (M))|F}H{I|L}{M(Oxidation (M))|F}VV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L}[YE]KPV;VV{I|L}D{[C(Carbamidomethyl (C))G]|[NC]}[HK]{I|L}V 3.9879;2.1878;2.1778;1.9365;1.331;0.90488;0.8302;0.7915;0.77935;0.69416 -;-;-;-;-;-;-;-;-;- 910 1 1.554 150855.9 1.0 14335 5850 20174 HBL1_DMSO_200M_050219_1,20187 HBL1_DMSO_200M_050219_1,20187,LLPMPTEPLL False False HQLFHIFVV 97.910427 570.3227 2274922.5 20174.0 ENSG00000006831|ENST00000357103|ADIPOR2 3.4743592739105225 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20188 97.919 478.0 247230.0 25 0 11642.0 -1 0 146 948.4466506278842 1894.8787483225683 2 948.9480468630792 MULTI CID FTMS 0 0 0 20174 109002.6875 0.2075117150801137 1 -0.1063156127929687 14 3 {[QN]|[E{I|L}]|[KN]}YAM{I|L}P 7 -1 32.7 0.0 0.0 1.7257 0.0 0.0 0.0 1074.4447022622746 1074.4447022622746 13.26954035899182 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.2302046884880938 0.0 {[QN]|[E{I|L}]|[KN]}YAM{I|L}P 1.7257 - 1625 1 1.554 77934.2 1.0 14336 5850 20174 HBL1_DMSO_200M_050219_1,20188 HBL1_DMSO_200M_050219_1,20188, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20189 97.934 800.0 143710.0 25 0 10345.0 + 25666 NGFPVFATV 9 130 951.493494700658 950.486218234058 1 951.4976684451104 MULTI CID FTMS 0 0 0 20174 110158.6875 0.0240486128985145 9 -0.9709625244140624 15 Unmodified _NGFPVFATV_ ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF 92.4914307365334 0.0139747738690111 3 [VP]{M(Oxidation (M))|F}[NG]{M(Oxidation (M))|F}ATV 9 4 + 54.751 0.0 0.0 5.7603 5.7603 85.012 0.0 0.0 0.0 7.5 13.983259264971151 7.5 7.5 0 0.6139829889124311 1.3979400086720375 0.0 1.6549471895720984 [VP]{M(Oxidation (M))|F}[NG]{M(Oxidation (M))|F}ATV;[Q{I|L}]CAV{M(Oxidation (M))|F}ATV;[Q{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}ATV;[Q{I|L}]G{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}ATV;[Q{I|L}]MAA{M(Oxidation (M))|F}ATV;{[QV]|[N{I|L}]|[RA]|[KV]}{[WT]|[RM]}{M(Oxidation (M))|F}ATV;{[QV]|[N{I|L}]|[RA]|[KV]}A{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}ATV;[VP][MN][YK]TV;{[TV]|[{I|L}S]}[WQ]{M(Oxidation (M))|F}ATV;[VP]{M(Oxidation (M))|F}[VP]VYM 5.7603;4.9712;4.5003;4.2927;3.7876;3.5151;3.3075;3.0861;3.0611;3.0565 -;-;-;-;-;-;-;-;-;- 1165 1 1.554 76128.2 0.6000000238418579 14337 5850 20174 HBL1_DMSO_200M_050219_1,20189 HBL1_DMSO_200M_050219_1,20189,NGFPVFATV True True NGFPVFATV 97.9342 951.49766844511 52438303.75 20174.0 ENST00000477668.5_1_3:127323572-127337961:+|nuORF;;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2 7.627235730489095 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20190 97.948 800.0 171790.0 25 0 12673.0 + 29350 QIYEIFQKL 9 165 591.3335344596736 0 591.3323852419853 PEAK CID FTMS 0 0 0 20174 100887.984375 0.7118981728534446 1 -0.1063156127929687 16 Unmodified _QIYEIFQKL_ ENSG00000156976|ENST00000323963|EIF4A2;ENST00000429589.5_1_3:186502413-186505273:+|nuORF;ENST00000465792.1_1_3:186503888-186504086:+|nuORF;ENST00000466362.1_1_3:186502860-186504086:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000475653.5_1_3:186502413-186505086:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2 41.8396318013385 0.053988301646488 3 YE{I|L}{M(Oxidation (M))|F}QK 6 3 17.851 0.0 0.0 1.5119 0.0 0.0 241.1456786919173 128.07203088931877 369.21770958123614 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.7984550065040281 + YE{I|L}{M(Oxidation (M))|F}QK 1.5119 + + 395 + 1 1.554 103640.8 0.550000011920929 14338 5850 20174 HBL1_DMSO_200M_050219_1,20190 HBL1_DMSO_200M_050219_1,20190,QIYEIFQKL True True QIYEIFQKL 97.948031 591.332385241985 949297.375 20174.0 nc|ENSG00000156976|Q14240-2|EIF4A2;;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;;ENSG00000156976|ENST00000323963|EIF4A2;;ENST00000466362.1_1_3:186502860-186504086:+|nuORF;;ENST00000475653.5_1_3:186502413-186505086:+|nuORF;;ENST00000465792.1_1_3:186503888-186504086:+|nuORF;;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;;ENST00000429589.5_1_3:186502413-186505273:+|nuORF 3.5306126276652017 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20192 97.96 457.0 595410.0 25 0 11352.0 -1 0 174 1081.5289406307834 3241.56499249255 3 1081.864916980267 MULTI CID FTMS 0 0 0 20191 811697.25 1.0 0 0.0 1 3 V[QP]DRRSANMVN{I|L} 13 -1 90.923 0.0 0.0 2.8049 0.0 0.0 1742.8422649185782 0.0 1742.8422649185782 0.0 58.834816585332106 0.0 0.0 0 0.8494850021680094 0.0 1.3807196863200843 2.2416440611282624 V[QP]DRRSANMVN{I|L} 2.8049 - 5736 1 1.554 174030.5 1.0 14339 5851 20191 HBL1_DMSO_200M_050219_1,20192 HBL1_DMSO_200M_050219_1,20192, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20193 97.961 26.0 1715600.0 25 0 115270.0 + 1509 ALHSWFQTL 9 95 551.7861803677869 1101.5578078023736 2 551.7859985232353 MULTI CID FTMS 0 0 0 20191 1421662.875 1.0 0 0.0 2 Unmodified _ALHSWFQTL_ ENSG00000166986|ENST00000262027|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF;nc|ENSG00000166986|P56192-2|MARS1 36.506200033944 0.094635877243972 3 SW{M(Oxidation (M))|F}Q[{I|L}T] 6 3 35.195 0.0 0.0 3.195 0.0 0.0 321.18071181465 0.0 321.18071181465 0.0 5.809159218443796 0.0 0.0 0 0.0 0.0 1.305462187404089 0.0 + SW{M(Oxidation (M))|F}Q[{I|L}T] 3.195 + + 348 1 1.554 41464.9 1.0 14340 5851 20191 HBL1_DMSO_200M_050219_1,20193 HBL1_DMSO_200M_050219_1,20193,ALHSWFQTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20194 97.963 109.0 416760.0 25 0 63436.0 + 44270 YLLDNLTMI 9 69 548.2896035399236 1094.5646541466472 2 548.2902709841728 MULTI CID FTMS 0 0 0 20191 364203.375 0.2180929706987443 -3 0.4055862426757812 3 Unmodified _YLLDNLTMI_ REV__L1PB1_dup6616|chr8:82292382-82293007:-|1.773853938787453|0.0196351871970747|6.5|48.0|37|3|anti-sense 14.581692164780916 0.4419739649577144 3 [Y{I|L}]{I|L} 3 -1 22.676 0.0 0.0 2.0717 0.0 0.0 0.0 702.3099950244008 702.3099950244008 3.634993639681309 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [Y{I|L}]{I|L} 2.0717 + + 49 1 1.554 43657.2 1.0 14341 5851 20191 HBL1_DMSO_200M_050219_1,20194 HBL1_DMSO_200M_050219_1,20194,YLLDNLTMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20195 97.966 151.0 387830.0 25 0 48356.0 40382 VIALEGDIVSL 11 96 564.829501631279 1127.6444503293578 2 564.8302490115166 MULTI CID FTMS 0 0 0 20191 276459.375 1.0 0 0.0 4 Unmodified _VIALEGDIVSL_ ENST00000489381.1_1_7:110305061-111030646:-|nuORF 19.256988751693697 0.6345794173041263 3 {[QS]|[NT]}{I|L}N{I|L} 5 9 23.64 0.0 0.0 2.0964 0.0 0.0 0.0 569.3195894830686 569.3195894830686 4.387568628841265 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[QS]|[NT]}{I|L}N{I|L} 2.0964 - 96 + 1 1.554 49718.7 1.0 14342 5851 20191 HBL1_DMSO_200M_050219_1,20195 HBL1_DMSO_200M_050219_1,20195,VIALEGDIVSL False True SQLNIWIRV 97.966216 564.830249011517 1643329.75 20191.0 nc|ENSG00000114796|Q6TFL4-2|KLHL24;;ENSG00000114796|ENST00000242810|KLHL24 2.496070464452108 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20196 97.971 242.0 351320.0 25 0 34691.0 + 30315 RVLELIPQI 9 101 540.8417654986439 1079.6689780640877 2 540.8426391482353 MULTI CID FTMS 0 0 0 20191 246674.0 0.6499186939657338 2 -0.2529296875 5 Unmodified _RAARRLPQI_ nc|ENSG00000100284|O60784-2|TOM1;nc|ENSG00000100284|O60784-4|TOM1;nc|ENSG00000100284|O60784-3|TOM1;ENST00000424387.5_1_22:35695884-35743199:+|nuORF;ENST00000491987.1_1_22:35723272-35729230:+|nuORF;ENST00000404284.6_1_22:35717823-35727385:+|nuORF;ENSG00000100284|ENST00000449058|TOM1 26.88365393820708 0.1891292719743517 3 {[QN]|[E{I|L}]|[KN]}[RV]{I|L}{I|L}PQ{I|L} 9 4 + 38.35 0.0 0.0 3.552 3.552 73.969 0.0 0.0 0.0 3.521825181113627 7.2037746486128 3.521825181113627 3.521825181113627 0 1.1237125054200234 1.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[RV]{I|L}{I|L}PQ{I|L};[{I|L}V]{[RE]|[WV]}{I|L}{I|L}PQ{I|L};[Q{I|L}][KQ]{I|L}{I|L}PQ{I|L};{[QN]|[E{I|L}]|[KN]}PKKKPQ{I|L};{[SA]|[TG]}VV{I|L}{I|L}[HK]T{I|L};{[SA]|[TG]}VV{I|L}{I|L}[TA]PP{I|L};{[SA]|[TG]}VV{I|L}{I|L}[HK]{I|L}T;[{I|L}P]EKKKPQ{I|L} 3.552;3.2258;2.9046;2.6418;2.2832;1.872;1.093;1.0119 -;-;-;-;-;-;-;- 215 1 1.554 73894.5 1.0 14343 5851 20191 HBL1_DMSO_200M_050219_1,20196 HBL1_DMSO_200M_050219_1,20196,RAARRLPQI False False RVLELIPQI 97.970741 540.842639148235 14377700.0 20191.0 nc|ENSG00000100284|O60784-2|TOM1;;nc|ENSG00000100284|O60784-4|TOM1;;nc|ENSG00000100284|O60784-3|TOM1;;ENST00000424387.5_1_22:35695884-35743199:+|nuORF;;ENST00000491987.1_1_22:35723272-35729230:+|nuORF;;ENST00000404284.6_1_22:35717823-35727385:+|nuORF;;ENSG00000100284|ENST00000449058|TOM1 2.857640584309896 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20197 97.975 242.0 269850.0 25 0 48419.0 + 13223 HGVFLPLV 8 85 441.2657196275031 880.5168863218062 2 441.2652770876884 MULTI CID FTMS 0 0 0 20191 185770.3125 0.5127327357165553 -3 0.4055862426757812 6 Unmodified _HGVFLPLV_ ENSG00000100647|ENST00000342745|SUSD6;ENST00000556993.1_1_14:70125309-70170323:+|nuORF 52.33426049586781 0.1282678332820461 3 {[HG]|PP}V{M(Oxidation (M))|F}{I|L}P{I|L}V 8 0 + 42.955 0.0 0.0 4.8784 4.8784 85.906 0.0 0.0 0.0 3.979400086720375 29.46038326757167 3.979400086720375 13.789850105233292 0 1.3569758080123702 0.0 0.0 0.0 + + {[HG]|PP}V{M(Oxidation (M))|F}{I|L}P{I|L}V;{[HG]|PP}V{I|L}{M(Oxidation (M))|F}P{I|L}V;{[VA]|[{I|L}G]}{[{M(Oxidation (M))|F}H]|[RQ]}VP{I|L}V;{[VA]|[{I|L}G]}[HV]{M(Oxidation (M))|F}P{I|L}V;{[HG]|PP}V[KT]Q{I|L}V;{[HG]|PP}V[KT][AG]{I|L}V 4.8784;3.3123;2.5503;2.0085;1.5842;0.53227 +;-;-;-;-;- + 158 1 1.554 58626.2 1.0 14344 5851 20191 HBL1_DMSO_200M_050219_1,20197 HBL1_DMSO_200M_050219_1,20197,HGVFLPLV True True HGVFLPLV 97.975254 441.265277087688 3233911.25 20191.0 ENST00000556993.1_1_14:70125309-70170323:+|nuORF;;ENSG00000100647|ENST00000342745|SUSD6 5.254844347635905 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20198 97.988 725.0 338360.0 25 0 28575.0 + 36232 SWPDGMLSM 9 188 512.2170727525403 1022.4195925718806 2 512.2178222537041 MULTI CID FTMS 0 0 0 20191 182680.28125 1.0 0 0.0 7 Unmodified _SWPDGMLSM_ ENSG00000124151|ENST00000371998|NCOA3;nc|ENSG00000124151|Q9Y6Q9-2|NCOA3;nc|ENSG00000124151|Q9Y6Q9-3|NCOA3;nc|ENSG00000124151|Q9Y6Q9-4|NCOA3;nc|ENSG00000124151|Q9Y6Q9-5|NCOA3 28.486842064014134 0.1687311288560894 3 [DP]GM{I|L}SWSM 9 4 [DP]GM{I|L}SW + + 22.717 13.447 1.7101 2.2218 2.2218 49.048 0.0 0.0 0.0 0.0 -1.5159007359483994 -1.5159007359483994 0.0 0 0.0 0.0 0.1747425010840047 0.0 [DP]GM{I|L}SWSM 2.2218 - 780 + 1 1.554 184485.8 1.0 14345 5851 20191 HBL1_DMSO_200M_050219_1,20198 HBL1_DMSO_200M_050219_1,20198,SWPDGMLSM False True SWPDGMLSM 97.987837 512.217822253704 1058593.125 20191.0 nc|ENSG00000124151|Q9Y6Q9-3|NCOA3;;nc|ENSG00000124151|Q9Y6Q9-5|NCOA3;;nc|ENSG00000124151|Q9Y6Q9-4|NCOA3;;ENSG00000124151|ENST00000371998|NCOA3;;nc|ENSG00000124151|Q9Y6Q9-2|NCOA3 3.136230707168579 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20199 97.992 192.0 392790.0 25 0 35478.0 21729 LPLTSSPPFL 10 106 536.3058675216381 1070.597182110076 2 536.3029052615166 MULTI CID FTMS 0 0 0 20191 175474.375 0.2840303192014021 -8 0.9694595336914062 8 Unmodified _LPLTSSPPFL_ ENST00000492240.5_1_20:2640597-2640995:-|nuORF 23.1484247019978 0.4485954791219598 3 {M(Oxidation (M))|F} 1 9 18.852 0.0 0.0 1.7608 0.0 0.0 905.517987019059 0.0 905.517987019059 0.0 1.571362609069734 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.7608 + + 177 + 1 1.554 68057.4 1.0 14346 5851 20191 HBL1_DMSO_200M_050219_1,20199 HBL1_DMSO_200M_050219_1,20199,LPLTSSPPFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20200 97.995 180.0 276550.0 25 0 23715.0 + 30108 QVIPVLPQVM 10 83 562.3307726826619 1122.6469924321236 2 562.3306762576103 MULTI CID FTMS 0 0 0 20191 168908.125 1.0 0 0.0 9 Unmodified _QVIPVLPQVM_ ENSG00000113851|ENST00000231948|CRBN;ENST00000478353.1_1_3:3215741-3221371:-|nuORF;ENST00000491834.5_1_3:3197887-3221343:-|nuORF;ENST00000492178.1_1_3:3214458-3216930:-|nuORF;ENST00000498700.5_1_3:3214275-3221371:-|nuORF;nc|ENSG00000113851|Q96SW2-2|CRBN 35.61225514009592 0.2039006631696762 3 [QP]V{I|L}V{I|L}[QP]VM 10 2 + 44.63 0.0 0.0 3.9755 3.9755 69.311 0.0 0.0 0.0 0.1579426718323162 10.809159218443796 0.1579426718323162 0.1579426718323162 0 1.079689690656103 1.0457574905606752 0.0 0.3252574989159953 [QP]V{I|L}V{I|L}[QP]VM;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PV{I|L}[QP]VM;{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}V{I|L}[QP]VM;[QP]{I|L}VV{I|L}[QP]VM;[VP]{I|L}QV{I|L}[QP]VM;[VP]{I|L}VQ{I|L}[QP]VM;[VP]Q{I|L}V{I|L}[QP]VM;[VP]{I|L}[AG]V{I|L}[QP]VM;[VP]{I|L}V[AG]{I|L}[QP]VM;[VP][AG]{I|L}V{I|L}[QP]VM 3.9755;3.9614;3.8045;3.7778;3.6069;3.6069;3.1819;2.5009;2.5009;2.0759 -;+;-;-;-;-;-;-;-;- + 216 1 1.554 48375.2 1.0 14347 5851 20191 HBL1_DMSO_200M_050219_1,20200 HBL1_DMSO_200M_050219_1,20200,QVIPVLPQVM False True QVIPVLPQVM 97.995043 562.33067625761 1677242.0 20191.0 ENST00000492178.1_1_3:3214458-3216930:-|nuORF;;ENSG00000113851|ENST00000231948|CRBN;;ENST00000478353.1_1_3:3215741-3221371:-|nuORF;;nc|ENSG00000113851|Q96SW2-2|CRBN;;ENST00000498700.5_1_3:3214275-3221371:-|nuORF;;ENST00000491834.5_1_3:3197887-3221343:-|nuORF 6.150442123413086 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20201 97.997 100.0 903570.0 25 0 88357.0 + 2334 AQLDELMAHL 10 93 570.7917971477588 0 570.7921630740166 PEAK CID FTMS 0 0 0 20191 181697.140625 1.0 0 0.0 10 Unmodified _AQLDELMAHL_ ENSG00000110031|ENST00000395074|LPXN;ENST00000529915.1_1_11:58322280-58343350:-|nuORF;nc|ENSG00000110031|O60711-2|LPXN 48.345845343767074 0.0580028052695927 3 {I|L}DE{I|L}MAH 7 3 33.509 0.0 0.0 2.9405 0.0 0.0 199.10241634810933 128.07221399478752 327.1746303428969 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 + {I|L}DE{I|L}MAH 2.9405 + + 100 + 1 1.554 74368.8 1.0 14348 5851 20191 HBL1_DMSO_200M_050219_1,20201 HBL1_DMSO_200M_050219_1,20201,AQLDELMAHL True True AQLDELMAHL 97.997212 570.792163074017 1899428.875 20191.0 nc|ENSG00000110031|O60711-2|LPXN;;ENSG00000110031|ENST00000395074|LPXN;;ENST00000529915.1_1_11:58322280-58343350:-|nuORF 6.787123680114746 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20202 98.003 263.0 406020.0 25 0 43286.0 + 21281 LPEDLYHLI 9 103 556.8026297314055 1111.590706529611 2 556.8032714724541 MULTI CID FTMS 0 0 0 20191 173367.390625 0.2014572557063783 -3 0.4055862426757812 11 Unmodified _LPEDLYHLI_ ENSG00000110700|ENST00000525634|RPS13;ENST00000458227.1_1_2:25191966-25192092:-|nuORF;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000531908.5_1_11:17095982-17097186:-|nuORF 85.35673624503755 0.0162188719545379 3 {I|L}PED{I|L}YH{I|L}{I|L} 9 0 + 90.945 0.0 0.0 8.1815 8.1815 97.336 0.0 0.0 0.0 53.87009080640347 14.09256854528806 14.09256854528806 39.095019080956064 0 1.892159058960253 1.6989700043360187 0.3252574989159953 0.0 + + {I|L}PED{I|L}YH{I|L}{I|L};{I|L}P[C(Carbamidomethyl (C))M][KT]H{I|L}{I|L} 8.1815;4.6645 +;- + 832 + 1 1.554 86735.9 1.0 14349 5851 20191 HBL1_DMSO_200M_050219_1,20202 HBL1_DMSO_200M_050219_1,20202,LPEDLYHLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20203 98.017 800.0 187140.0 25 0 22581.0 -1 CVQECPCVL 9 189 554.232958559637 1106.451364186074 2 554.2338134646416 MULTI CID FTMS 0 0 0 20191 164924.40625 0.3397403091328647 2 -0.2529296875 12 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))VQEC(Carbamidomethyl (C))PCVL_ nc|ENSG00000197558|A2VEC9|SSPOP 21.74664581756881 0.2544899275067181 3 {I|L}[QT]{I|L}HWV 7 -1 21.788 0.0 0.0 1.9692 0.0 0.0 210.95857961751773 0.0 210.95857961751773 0.0 2.557357201254284 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 {I|L}[QT]{I|L}HWV 1.9692 - 1564 + 1 1.554 120411.2 0.6700000166893005 14350 5851 20191 HBL1_DMSO_200M_050219_1,20203 HBL1_DMSO_200M_050219_1,20203,CVQECPCVL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 20204 98.026 480.0 281000.0 25 0 31481.0 + 10624 FVNDIFERI 9 128 576.805936717175 1151.59732050115 2 576.8069946169853 MULTI CID FTMS 0 0 0 20191 152464.5625 0.0043357597191935 15 -1.6670455932617188 13 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 51.41523569358685 0.0372669606867193 3 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L} 9 0 + 84.276 0.0 0.0 7.3182 7.3182 91.624 0.0 0.0 0.0 73.30706579873059 12.98332479720628 12.98332479720628 9.208187539523747 0 1.1861818737241734 0.0 0.0 0.9049471895720984 + + {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}V{I|L}ND{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}WV{I|L};{M(Oxidation (M))|F}VN{I|L}D{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}W{I|L}V;{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}{I|L}WV;{M(Oxidation (M))|F}V{I|L}GGD{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGG{I|L}D{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}V{I|L}ND{M(Oxidation (M))|F}WV{I|L} 7.3182;6.5186;6.3746;6.2958;6.2771;5.8342;5.7586;5.575;5.4775;5.3521 +;-;-;-;-;-;-;-;-;- + 1721 + 1 1.554 102906.6 1.0 14351 5851 20191 HBL1_DMSO_200M_050219_1,20204 HBL1_DMSO_200M_050219_1,20204,FVNDIFERI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20205 98.039 800.0 195410.0 25 0 21631.0 -1 0 140 651.3533921860628 650.3461157194628 1 651.3558227419853 MULTI CID FTMS 0 0 0 20191 154701.5625 0.0406859450875472 7 -0.7874298095703125 14 3 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}Q{I|L} 5 -1 + 42.848 0.0 0.0 6.5885 6.5885 81.839 0.0 0.0 0.0 2.667118777434752 6.382104921644455 2.667118777434752 2.667118777434752 0 1.075257498915995 0.0 0.0 0.2887254899964357 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}Q{I|L};[Q{I|L}]M{M(Oxidation (M))|F}{I|L};[Q{I|L}]{M(Oxidation (M))|F}M{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}Q{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PQ{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}[AG]{I|L};{[YD]|[{M(Oxidation (M))|F}M]}Q{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[AG]{I|L};[EP][RH]{I|L} 6.5885;6.1784;5.7736;5.5429;4.8606;4.6773;4.5507;3.8462;3.6316;3.239 -;-;-;-;-;-;-;-;-;- 258 1 1.554 118160.5 0.6600000262260437 14352 5851 20191 HBL1_DMSO_200M_050219_1,20205 HBL1_DMSO_200M_050219_1,20205, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20206 98.046 288.0 182810.0 25 0 24853.0 5412 DLLDWKYL 8 95 533.2833131495938 0 533.2834960818291 PEAK CID FTMS 0 0 0 20191 166170.734375 1.0 0 0.0 15 Unmodified _DLLDWKYL_ ENSG00000104812|ENST00000323798|GYS1;nc|ENSG00000104812|P13807-2|GYS1 13.50788311687929 0.5021269579892848 3 {M(Oxidation (M))|F}YVA 4 8 11.692 0.0 0.0 1.0983 0.0 0.0 359.20681077008754 222.0884798639281 581.2952906340157 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}YVA 1.0983 - 65 + 1 1.554 46039.1 1.0 14353 5851 20191 HBL1_DMSO_200M_050219_1,20206 HBL1_DMSO_200M_050219_1,20206,DLLDWKYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20207 98.06 800.0 195080.0 25 0 19151.0 + 45680 YVYEYLLHV 9 156 599.810578387625 1197.60660384205 2 599.8113891482353 MULTI CID FTMS 0 0 0 20191 139662.734375 1.0 0 0.0 16 Unmodified _YVYEYLLHV_ ENSG00000145687|ENST00000615665|SSBP2;ENSG00000157216|ENST00000610401|SSBP3;nc|ENSG00000145687|P81877-2|SSBP2;nc|ENSG00000145687|P81877-3|SSBP2;nc|ENSG00000145687|P81877-4|SSBP2;nc|ENSG00000145687|P81877-5|SSBP2;nc|ENSG00000145687|P81877|SSBP2;nc|ENSG00000157216|Q9BWW4-2|SSBP3;nc|ENSG00000157216|Q9BWW4-3|SSBP3 56.541270873467816 0.0279970378729908 3 [YV]YEY{I|L}{I|L}HV 9 0 + 58.546 0.0 0.0 4.8886 4.8886 82.299 0.0 0.0 0.0 32.70780133118173 7.069167772559908 7.069167772559908 7.95880017344075 0 0.6549471895720984 2.0 0.6747425010840047 0.0 + + [YV]YEY{I|L}{I|L}HV;[YV]YEY{I|L}[HV]{I|L};[YV]{[QN]|[E{I|L}]|[KN]}YY{I|L}HV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]VP{M(Oxidation (M))|F};[YV]V[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}QQV;[YV]V[C(Carbamidomethyl (C))R][C(Carbamidomethyl (C))K]T{I|L};[YE]Y{I|L}{I|L}HV[YV];[{I|L}P]N{M(Oxidation (M))|F}V{[DS]|[MA]|[CV]|TT}YP{M(Oxidation (M))|F};[{I|L}P]Y{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]VP{M(Oxidation (M))|F};[YV]Y{[DS]|[MA]|[CV]|TT}V[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.8886;4.224;2.7424;2.1103;1.9926;1.8988;1.8906;1.7935;1.7579;1.696 +;-;-;-;-;-;-;-;-;- + 1339 + 1 1.554 112603.4 0.6200000047683716 14354 5851 20191 HBL1_DMSO_200M_050219_1,20207 HBL1_DMSO_200M_050219_1,20207,YVYEYLLHV True True YVYEYLLHV 98.059737 599.811389148235 983280.625 20191.0 nc|ENSG00000145687|P81877-3|SSBP2;;nc|ENSG00000145687|P81877-5|SSBP2;;nc|ENSG00000145687|P81877-4|SSBP2;;nc|ENSG00000145687|P81877-2|SSBP2;;nc|ENSG00000157216|Q9BWW4-3|SSBP3;;ENSG00000145687|ENST00000615665|SSBP2;;nc|ENSG00000145687|P81877|SSBP2;;nc|ENSG00000157216|Q9BWW4-2|SSBP3;;ENSG00000157216|ENST00000610401|SSBP3 7.472306569417317 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20208 98.074 800.0 65059.0 25 0 13672.0 + 1760 ALRLIISI 8 87 449.80769777763936 897.6008426220787 2 449.8072387576103 MULTI CID FTMS 0 0 0 20191 131709.296875 0.013092162004019 13 -1.4300537109375 17 Unmodified _ALRLIISI_ ENSG00000111684|ENST00000261407|LPCAT3;ENST00000536971.1_1_12:7090970-7125761:-|nuORF 44.40701690623563 0.1655546087385432 3 {I|L}A{I|L} 3 6 45.177 0.0 0.0 5.0331 0.0 0.0 0.0 597.3736666315061 597.3736666315061 19.47621246364342 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}A{I|L} 5.0331 - 26 + 1 1.554 47912.7 0.5099999904632568 14355 5851 20191 HBL1_DMSO_200M_050219_1,20208 HBL1_DMSO_200M_050219_1,20208,ALRLIISI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20209 98.089 800.0 126470.0 25 0 18391.0 + 33789 SLCSQLLNI 9 141 495.7684751035184 989.5223972738368 2 495.7688171267509 MULTI CID FTMS 0 0 0 20191 101163.828125 0.1198955435087111 3 -0.263092041015625 18 Unmodified _SLCSQLLNI_ REV__ENSG00000198758|ENST00000361965|EPS8L3;REV__nc|ENSG00000198758|Q8TE67-2|EPS8L3;REV__nc|ENSG00000198758|Q8TE67-3|EPS8L3 26.88365393820708 0.1891292719743517 3 [PA]YYP[{I|L}P]G{I|L} 9 -1 + 19.224 0.0 0.0 1.9428 1.9428 73.192 0.0 0.0 0.0 0.1562423148207372 5.030946154251272 0.1562423148207372 4.956130378462476 0 0.0 0.3872161432802645 0.0 0.0 [PA]YYP[{I|L}P]G{I|L};[PA][KP]T{[{M(Oxidation (M))|F}C]|[YS]}N{I|L};[VS][{I|L}V]P[YN][QA];[PA][KP]T{[{M(Oxidation (M))|F}C]|[YS]}GG{I|L};[PA][KP]TG[SG]Y{I|L};[PA]YYP[{I|L}P]AV;[PA]YYP[{I|L}V][PA];[PA][KP]T{[{M(Oxidation (M))|F}C]|[YS]}QV;{[TV]|[{I|L}S]}VVP[YN][QA];[PA][KP]T{[{M(Oxidation (M))|F}C]|[YS]}GAV 1.9428;1.4419;1.4344;1.2667;0.96248;0.78452;0.28443;0.28366;0.16124;0.10843 -;-;-;-;-;-;-;-;-;- 449 + 1 1.554 81640.0 0.4900000095367431 14356 5851 20191 HBL1_DMSO_200M_050219_1,20209 HBL1_DMSO_200M_050219_1,20209,SLCSQLLNI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20210 98.102 800.0 126900.0 25 0 13441.0 + 34888 SQIDIYVQVL 10 143 589.326691540433 1176.638830147666 2 589.3282348513603 MULTI CID FTMS 0 0 0 20191 104506.3671875 1.0 0 0.0 19 Unmodified _SQIDIYVQVL_ ENSG00000178896|ENST00000316052|EXOSC4 33.4449034751529 0.2267874087365337 3 {[QV]|[N{I|L}]|[RA]|[KV]}TD{I|L}YV 7 5 43.237 0.0 0.0 3.6746 0.0 0.0 0.0 355.19538467330966 355.19538467330966 24.27444426769359 0.0 0.0 0.0 0 0.0 1.0 1.079689690656103 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}TD{I|L}YV 3.6746 - 846 1 1.554 80438.1 0.4799999892711639 14357 5851 20191 HBL1_DMSO_200M_050219_1,20210 HBL1_DMSO_200M_050219_1,20210,SQIDIYVQVL False True SQIDIYVQVL 98.102378 589.32823485136 1396662.0 20191.0 ENSG00000178896|ENST00000316052|EXOSC4 5.833950042724609 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20211 98.116 800.0 132490.0 25 0 3530.1 -1 0 108 1157.557299792767 0 1157.557299792767 PEAK CID FTMS 0 0 0 -1 0 20 3 T 1 -1 4.6041 0.0 0.0 0.19904 0.0 0.0 1312.5049671619029 896.5463961236936 2209.0513632855964 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.19904 - 21 + 1 1.554 66666.5 0.4699999988079071 14358 5851 20191 HBL1_DMSO_200M_050219_1,20211 HBL1_DMSO_200M_050219_1,20211, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20213 98.121 7.2 6634300.0 25 0 1021000.0 + 4023 DALRSILTI 9 65 501.3030275794831 1000.591502225766 2 501.3036682009697 MULTI CID FTMS 0 0 0 20212 8306905.0 0.0607246090889909 5 -0.5209426879882812 1 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 47.594388314883695 0.0456443387682827 3 {[DA]|[EG]}{I|L}RS{I|L}{I|L}T{I|L} 9 0 + 65.812 0.0 0.0 6.5773 6.5773 94.031 0.0 0.0 0.0 10.863650028014431 38.36487529584844 10.863650028014431 65.81215024481537 0 1.1237125054200234 1.3979400086720375 0.7742275032520141 0.0 + + {[DA]|[EG]}{I|L}RS{I|L}{I|L}T{I|L} 6.5773 + + 45 1 1.569 40450.2 1.0 14359 5852 20212 HBL1_DMSO_200M_050219_1,20213 HBL1_DMSO_200M_050219_1,20213,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20214 98.122 41.0 1852000.0 25 0 316880.0 + 21455 LPHLPSLEI 9 94 509.8000735842508 1017.5855942353016 2 509.8002807497978 MULTI CID FTMS 0 0 0 20212 1194263.875 0.2996925129060137 3 -0.2184295654296875 2 Unmodified _LPHLPSLEI_ ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2 60.38955033654506 0.025866396858536 3 [H{I|L}]PSP{I|L}{I|L}E{I|L} 9 4 + 69.109 0.0 0.0 6.7915 6.7915 86.236 0.0 0.0 0.0 6.505149978319906 16.478174818886373 6.505149978319906 5.255762612236907 0 0.75 1.0 1.079689690656103 0.0 [H{I|L}]PSP{I|L}{I|L}E{I|L};[H{I|L}]PSP{I|L}E{I|L}{I|L};[H{I|L}]P{I|L}[PS]{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}SP{I|L}{I|L}E{I|L};[{I|L}P]HSP{I|L}{I|L}E{I|L};[H{I|L}]P{I|L}[PS]E{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}SP{I|L}E{I|L}{I|L};[{I|L}P]SHP{I|L}{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[PS]{I|L}E{I|L};[VP]THP{I|L}{I|L}E{I|L} 6.7915;6.275;6.1754;6.1522;5.9904;5.6589;5.6357;5.539;5.5361;5.5304 -;-;-;-;-;-;-;-;-;- 796 1 1.569 63359.1 1.0 14360 5852 20212 HBL1_DMSO_200M_050219_1,20214 HBL1_DMSO_200M_050219_1,20214,LPHLPSLEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20215 98.123 39.0 3672300.0 25 0 465530.0 + 20037 LIPDIDLKL 9 90 520.322988589831 1038.6314242464618 2 520.3239623904228 MULTI CID FTMS 0 0 0 20212 2110101.75 0.7524797872189626 -1 0.1684341430664062 3 Unmodified _LIPDIDLKL_ ENSG00000173473|ENST00000254480|SMARCC1 32.78568957990786 0.1150597335874693 3 {I|L}{I|L}PD{I|L}D{I|L}K{I|L} 9 0 + 67.48 0.0 0.0 6.497 6.497 87.839 0.0 0.0 0.0 20.396650820163472 8.239087409443187 8.239087409443187 8.239087409443187 0 0.3807196863200844 2.0 0.4247425010840047 0.2134679910804404 + + {I|L}{I|L}PD{I|L}D{I|L}K{I|L};{I|L}{I|L}PD{I|L}D{I|L}{I|L}K;{I|L}{I|L}{I|L}[DP]D{I|L}K{I|L};[DP]{I|L}D{I|L}K{I|L}{I|L}{I|L};{I|L}{I|L}{I|L}[DP]D{I|L}{I|L}K;{I|L}{I|L}DDPK{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}PD{I|L}K{I|L}{I|L}{I|L};{I|L}{I|L}DPSR{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}DP{I|L}K{I|L}{I|L}{I|L};[DP]{I|L}{I|L}SR{I|L}{I|L}{I|L} 6.497;5.7037;5.5832;5.0764;4.7899;4.4421;3.2441;3.2287;2.9543;2.9169 +;-;-;-;-;-;-;-;-;- + 229 + 1 1.569 114611.7 1.0 14361 5852 20212 HBL1_DMSO_200M_050219_1,20215 HBL1_DMSO_200M_050219_1,20215,LIPDIDLKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20216 98.125 68.0 1529800.0 25 0 213420.0 + 27762 PLPLPPLAL 9 98 465.8046970508198 929.5948411684396 2 465.8049194216728 MULTI CID FTMS 0 0 0 20212 1109378.0 0.3748746549261733 1 -0.0844955444335937 4 Unmodified _PLPLPPLAL_ ENST00000591090.5_1_19:12859061-12859118:+|nuORF 45.7499826716795 0.0496882803020414 3 {I|L}{I|L}PP 4 5 39.297 0.0 0.0 4.2273 0.0 0.0 0.0 506.2989156650244 506.2989156650244 10.32528301678009 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 {I|L}{I|L}PP 4.2273 - 314 + 1 1.569 85993.3 1.0 14362 5852 20212 HBL1_DMSO_200M_050219_1,20216 HBL1_DMSO_200M_050219_1,20216,PLPLPPLAL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20217 98.127 74.0 2502300.0 25 0 255220.0 + 15656 IQLLSLLRP 9 125 526.8449349458746 1051.675316958549 2 526.8454467654228 MULTI CID FTMS 0 0 0 20212 719503.4375 0.5016976667160575 1 -0.0844955444335937 5 Unmodified _IQLLSLLRP_ chr14:95694725-95711754|26|12.73|0.07|7.49|-|2|TE_info:LTR26D,LTR26D_dup123,ERV1,LTR,acceptor,-,95694449,95694725|None,TCL1A|2 74.92900055777586 0.0191935851694334 3 [Q{I|L}]KK{I|L}S{I|L} 7 5 54.442 0.0 0.0 5.1767 0.0 0.0 0.0 238.11820901947468 238.11820901947468 16.30551929950329 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.4247425010840047 1.372363747448347 [Q{I|L}]KK{I|L}S{I|L} 5.1767 - 538 1 1.569 140834.4 1.0 14363 5852 20212 HBL1_DMSO_200M_050219_1,20217 HBL1_DMSO_200M_050219_1,20217,IQLLSLLRP True True QALELPLRI 98.126605 526.845446765423 14452067.0 20212.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENSG00000132182|ENST00000254508|NUP210 2.070652812719345 2.0 False 9.0 False TE_chimeric_transcript PXD020620_cell_line HBL1_DMSO_200M_050219_1 20218 98.13 144.0 964610.0 25 0 101680.0 + 31059 RLIESLFTIQ 10 109 610.3558456483346 1218.697138363469 2 610.3558227419853 MULTI CID FTMS 0 0 0 20212 428518.34375 0.657359915513308 -2 0.274749755859375 6 Unmodified _RLIESLFTIQ_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 49.52724829834842 0.0829255630816734 3 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L}Q 10 2 + 67.171 0.0 0.0 5.5117 5.5117 83.821 0.0 0.0 0.0 0.7826363548738158 40.66061246681059 0.7826363548738158 6.989700043360188 0 1.0 1.0457574905606752 1.1307196863200843 0.0 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L}Q;{[QN]|[E{I|L}]|[KN]}[RV]T{I|L}{M(Oxidation (M))|F}T{I|L}Q;{[QN]|[E{I|L}]|[KN]}[R{I|L}]S[YV]V{I|L}Q;{[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}G{I|L}[TA];{[QN]|[E{I|L}]|[KN]}[RV]T[YV]V{I|L}Q;{[QN]|[E{I|L}]|[KN]}[RV]T{I|L}{M(Oxidation (M))|F}G{I|L}[TA] 5.5117;4.9382;3.3342;2.9521;2.7606;2.3786 -;-;-;-;-;- 295 1 1.569 107526.6 1.0 14364 5852 20212 HBL1_DMSO_200M_050219_1,20218 HBL1_DMSO_200M_050219_1,20218,RLIESLFTIQ True True RLIESLFTIQ 98.129513 610.355822741985 6254886.0 20212.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 6.88355016708374 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20219 98.132 121.0 951440.0 25 0 123460.0 + 40934 VLTEICHFHC 10 121 601.2770477783645 1200.5395426235289 2 601.2778808474541 MULTI CID FTMS 0 0 0 20212 437081.78125 0.175112787892956 4 -0.4038772583007812 7 Unmodified _VLTEICHFHC_ REV__ENSG00000065413|ENST00000282272|ANKRD44;REV__nc|ENSG00000065413|Q8N8A2-2|ANKRD44;REV__nc|ENSG00000065413|Q8N8A2-3|ANKRD44;REV__nc|ENSG00000065413|Q8N8A2-4|ANKRD44 21.74664581756881 0.480091245866545 3 {[TV]|[{I|L}S]}{I|L}E 4 -1 35.6 0.0 0.0 2.9653 0.0 0.0 0.0 755.2723361628445 755.2723361628445 16.922632038928498 0.0 0.0 0.0 0 0.0 2.0 0.7619229975844687 0.0 {[TV]|[{I|L}S]}{I|L}E 2.9653 - 657 1 1.569 85556.2 1.0 14365 5852 20212 HBL1_DMSO_200M_050219_1,20219 HBL1_DMSO_200M_050219_1,20219,VLTEICHFHC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20220 98.136 198.0 898900.0 25 0 143270.0 2753 ATLISTPHI 9 106 476.7769568374077 951.5393607416156 2 476.7769653201103 MULTI CID FTMS 0 0 0 20212 434746.6875 0.3395903013911299 -3 0.4186782836914062 8 Unmodified _ATLISTPHI_ ENSG00000136011|ENST00000388887|STAB2 28.486842064014134 0.1687311288560894 3 [TA]{I|L}{I|L}[DG]{I|L}{I|L}H 9 5 + 56.877 0.0 0.0 5.9774 5.9774 78.297 0.0 0.0 0.0 25.92477821267948 1.5760785336166805 1.5760785336166805 1.5760785336166805 0 0.4247425010840047 2.0 0.8807196863200843 0.0 [TA]{I|L}{I|L}[DG]{I|L}{I|L}H;[TA]{I|L}{I|L}[DG]{I|L}H{I|L};[TA]{I|L}G{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}H;[TA]{I|L}G{NN|[MP]|[D{I|L}]|[EV]}{I|L}H{I|L};[PG]{I|L}G[QT]{I|L}{I|L}[PG];{[VA]|[{I|L}G]}PG[QT]{I|L}{I|L}[PG];[PG]{I|L}GVVSG{I|L}[PG];[VP]AG[QT]{I|L}{I|L}[PG];[VP]Q[QT]{I|L}{I|L}[PG];{[VA]|[{I|L}G]}PGVVSG{I|L}[PG] 5.9774;5.8117;5.5832;5.4176;3.189;2.7542;2.3915;2.2751;2.2213;1.9567 -;-;-;-;-;-;-;-;-;- 731 + 1 1.569 138880.8 1.0 14366 5852 20212 HBL1_DMSO_200M_050219_1,20220 HBL1_DMSO_200M_050219_1,20220,ATLISTPHI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20221 98.14 221.0 684250.0 25 0 89753.0 + 10461 FTIFRTISV 9 124 542.3130699605376 1082.6115869878752 2 542.3141357302666 MULTI CID FTMS 0 0 0 20212 325412.125 0.4209344341272747 -1 0.1684341430664062 9 Unmodified _FTIFRTISV_ ENSG00000105447|ENST00000253237|GRWD1 71.70789743142352 0.0204387454931768 3 E{I|L}R{M(Oxidation (M))|F}T{I|L}GE 8 6 47.494 0.0 0.0 4.387 0.0 0.0 119.07400710273592 0.0 119.07400710273592 0.0 25.67893629597036 0.0 0.0 0 1.274227503252014 0.0 0.9291746928241124 0.2887254899964357 E{I|L}R{M(Oxidation (M))|F}T{I|L}GE 4.387 - 1480 1 1.569 117191.0 1.0 14367 5852 20212 HBL1_DMSO_200M_050219_1,20221 HBL1_DMSO_200M_050219_1,20221,FTIFRTISV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20222 98.144 205.0 607820.0 25 0 39869.0 + 9354 FIMEGGAMVL 10 99 1067.5251384394217 1066.5178619728215 1 1067.526416003704 MULTI CID FTMS 0 0 0 20212 305824.84375 0.1477818516231035 3 -0.2184295654296875 10 Unmodified _FIMEGGAMVL_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 100.37149154755038 0.0085903855881088 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQ{M(Oxidation (M))|F}{I|L}MV{I|L} 9 5 + 72.634 0.0 0.0 6.8104 6.8104 80.34 0.0 0.0 0.0 3.0102999566398125 16.478174818886373 3.0102999566398125 1.249387366082999 0 0.5189301784845296 0.0 1.8851518780601924 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQ{M(Oxidation (M))|F}{I|L}MV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGA{M(Oxidation (M))|F}{I|L}MV{I|L};{[NV]|[RG]}CE{M(Oxidation (M))|F}{I|L}MV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NA{M(Oxidation (M))|F}{I|L}MV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQ{M(Oxidation (M))|F}{I|L}VM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGA{M(Oxidation (M))|F}{I|L}VM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GG{M(Oxidation (M))|F}A{I|L}MV{I|L};{[NV]|[RG]}C{M(Oxidation (M))|F}E{I|L}MV{I|L};{[NV]|[RG]}CE{M(Oxidation (M))|F}{I|L}VM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQ{I|L}{M(Oxidation (M))|F}MV{I|L} 6.8104;6.6933;6.5282;6.3631;5.9285;5.8114;5.7718;5.6611;5.6463;5.6157 -;-;-;-;-;-;-;-;-;- 8582 1 1.569 83672.8 1.0 14368 5852 20212 HBL1_DMSO_200M_050219_1,20222 HBL1_DMSO_200M_050219_1,20222,FIMEGGAMVL True True FIMEGGAMVL 98.143944 1067.5264160037 35857600.0 20212.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 7.112929185231526 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20223 98.146 101.0 1217100.0 25 0 111880.0 + -1 PLVSDWMYL 9 117 570.2779009932717 1138.541249053343 2 570.2772704958916 MULTI CID FTMS 0 0 0 20212 293656.96875 0.4197041059797394 -2 0.274749755859375 11 Oxidation (M) _PLVSDWM(Oxidation (M))YL_ REV__ENSG00000132703|ENST00000255040|APCS 13.50788311687929 0.4710407108020397 3 {I|L}D{I|L}EMAH{I|L} 8 -1 29.593 0.0 0.0 2.5992 0.0 0.0 198.07171945264764 0.0 198.07171945264764 0.0 13.385584838783204 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {I|L}D{I|L}EMAH{I|L} 2.5992 - 805 + 1 1.569 94902.4 1.0 14369 5852 20212 HBL1_DMSO_200M_050219_1,20223 HBL1_DMSO_200M_050219_1,20223,PLVSDWMYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20224 98.153 398.0 408220.0 25 0 45161.0 + 16033 ITIPEIATSEL 11 155 593.8315942634963 1185.6486355937925 2 593.8323852419853 MULTI CID FTMS 0 0 0 20212 203171.34375 0.3664507242401912 -3 0.4186782836914062 12 Unmodified _ITIPEIATSEL_ ENSG00000153107|ENST00000341068|ANAPC1 107.1870275148908 0.0093756296070836 3 {[QN]|[E{I|L}]|[KN]}PT{I|L}{I|L}A 7 8 52.973 0.0 0.0 4.4678 0.0 0.0 0.0 445.1907858225613 445.1907858225613 14.330149415667378 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 1.7478499570595205 0.0 {[QN]|[E{I|L}]|[KN]}PT{I|L}{I|L}A 4.4678 - 6848 1 1.569 124200.9 1.0 14370 5852 20212 HBL1_DMSO_200M_050219_1,20224 HBL1_DMSO_200M_050219_1,20224,ITIPEIATSEL True True ITIPEIATSEL 98.153267 593.832385241985 21447666.0 20212.0 ENSG00000153107|ENST00000341068|ANAPC1 4.364973783493042 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20225 98.163 576.0 413900.0 25 0 78698.0 + 44784 YPLTQLVVV 9 178 516.3107676785994 1030.6069824239987 2 516.3112670779228 MULTI CID FTMS 0 0 0 20212 192105.03125 0.3944661073281364 -2 0.274749755859375 13 Unmodified _YPLTQLVVV_ ENSG00000140526|ENST00000352732|ABHD2 46.020951573049366 0.0490941689151868 3 [{I|L}P]TQY{I|L}VVV 9 2 + 71.506 0.0 0.0 6.9382 6.9382 82.888 0.0 0.0 0.0 5.117960610590671 9.889917747712644 5.117960610590671 2.636532636392218 0 0.7742275032520141 1.0457574905606752 1.841129063296272 0.0 [{I|L}P]TQY{I|L}VVV;[{I|L}P]TQ{I|L}YVVV;[{I|L}T]PQY{I|L}VVV;[{I|L}P]TYQ{I|L}VVV;[{I|L}T]PQ{I|L}YVVV;[{I|L}P]TQ{I|L}VYVV;[{I|L}T]QPY{I|L}VVV;[{I|L}P]T[AG]Y{I|L}VVV;[{I|L}T]QP{I|L}YVVV;[{I|L}T]PYQ{I|L}VVV 6.9382;6.6824;6.4416;6.3027;6.1858;6.1767;6.0765;6.0447;5.8207;5.8061 -;-;-;-;-;-;-;-;-;- 7603 1 1.569 182254.1 1.0 14371 5852 20212 HBL1_DMSO_200M_050219_1,20225 HBL1_DMSO_200M_050219_1,20225,YPLTQLVVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20226 98.17 362.0 560120.0 25 0 65856.0 + 36233 SWPLSPFLL 9 176 530.2966119782501 1058.5786710233 2 530.2977172732353 MULTI CID FTMS 0 0 0 20212 143870.6875 0.0189354001517114 8 -0.8092193603515625 14 Unmodified _SWPLSPFLL_ ENST00000328965.8_2_11:120100260-120100626:+|nuORF 26.88365393820708 0.1891292719743517 3 [WP]S{[TV]|[{I|L}S]}M{I|L}{I|L}{I|L} 9 4 + 60.569 0.0 0.0 5.7217 5.7217 82.272 0.0 0.0 0.0 5.69399252007166 16.478174818886373 5.69399252007166 4.771212547196626 0 0.7742275032520141 1.2218487496163564 0.3494850021680094 0.0 [WP]S{[TV]|[{I|L}S]}M{I|L}{I|L}{I|L};[WP]S[MT]V{I|L}{I|L}{I|L};[{I|L}P]C(Carbamidomethyl (C))C(Carbamidomethyl (C))RK{I|L}{I|L};[WP]{[WT]|[RM]}M{I|L}{I|L}{I|L};[TP]MSWV{I|L}{I|L}{I|L};[WP]S{[TV]|[{I|L}S]}{I|L}M{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P[QT]M{I|L}{I|L}{I|L};[WP]S[TP][{M(Oxidation (M))|F}V]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}TSWV{I|L}{I|L}{I|L};[{I|L}P][CG]C(Carbamidomethyl (C))RK{I|L}{I|L} 5.7217;5.271;5.1838;5.0868;5.0124;4.8686;4.5129;4.3758;4.3468;4.3088 -;-;-;-;-;-;-;-;-;- 5052 1 1.569 163462.4 1.0 14372 5852 20212 HBL1_DMSO_200M_050219_1,20226 HBL1_DMSO_200M_050219_1,20226,SWPLSPFLL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20227 98.184 800.0 327680.0 25 0 22138.0 + 44555 YPETLGRLLI 10 166 587.8451913206685 1173.675829708137 2 587.8454467654228 MULTI CID FTMS 0 0 0 20212 129551.1484375 0.1123270334546044 -4 0.5740203857421875 15 Unmodified _YPETLGRLLI_ ENSG00000103184|ENST00000251170|SEC14L5;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 107.09958533191995 0.0045178149581522 3 YPET{I|L}GR{I|L}{I|L}{I|L} 10 0 + 93.95 0.0 0.0 8.0048 8.0048 90.591 0.0 0.0 0.0 30.537523312715123 13.433225443731487 13.433225443731487 6.773174902439578 0 2.322682509756042 1.5228787452803376 1.1549471895720984 0.0 + + YPET{I|L}GR{I|L}{I|L}{I|L};YPE{I|L}TGR{I|L}{I|L}{I|L};YP{I|L}ETGR{I|L}{I|L}{I|L};Y{I|L}PETGR{I|L}{I|L}{I|L};[EP]T{I|L}{[NV]|[RG]}{I|L}{I|L}Y{I|L};[EP]T{I|L}{[NV]|[RG]}{I|L}Y{I|L}{I|L};[EP]T{I|L}{[NV]|[RG]}{I|L}{I|L}{I|L}Y;[EP]T{I|L}{[NV]|[RG]}Y{I|L}{I|L}{I|L};YP{M(Oxidation (M))|F}[RP]R{I|L}{I|L}{I|L};YP{I|L}{M(Oxidation (M))|F}[K{I|L}]TPPV 8.0048;7.4277;6.3011;4.8819;4.5848;4.5581;4.5169;4.068;3.7581;3.3301 +;-;-;-;-;-;-;-;-;- + 3771 + 1 1.569 196698.2 0.5400000214576721 14373 5852 20212 HBL1_DMSO_200M_050219_1,20227 HBL1_DMSO_200M_050219_1,20227,YPETLGRLLI True True YPETLGRLLI 98.183738 587.845446765423 45628521.0 20212.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000103184|ENST00000251170|SEC14L5;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 5.304647604624431 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20228 98.196 719.0 263030.0 25 0 20164.0 + 23277 RFPDLTVEL 9 176 545.3003992159358 1088.5862454986716 2 545.3005248904228 MULTI CID FTMS 0 0 0 20212 130310.5625 0.1428654339720278 19 -1.8082504272460933 16 Unmodified _LSWNKTVEL_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-4|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6 53.832793166522166 0.0319663582346103 3 {[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L} 9 3 + 62.118 0.0 0.0 5.7063 5.7063 79.4 0.0 0.0 0.0 4.73105301586196 14.973024840566469 4.73105301586196 3.0102999566397983 0 0.9802046884880938 0.958607314841775 0.9876954943324544 0.0 {[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[CA]|SS}{I|L}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[WT]|[RM]}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[WT]|[RM]}TVE{I|L};[R{M(Oxidation (M))|F}][DP]{I|L}TVE{I|L};{[WN]|[YH]}[KS]{I|L}TVE{I|L};[{M(Oxidation (M))|F}V][NG]K[PS]VE{I|L};{[QN]|[E{I|L}]|[KN]}V{[CT]|[{M(Oxidation (M))|F}G]}[{I|L}A]VE{I|L};[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}[PS]VE{I|L} 5.7063;5.4298;5.2717;5.1063;4.6717;4.3531;3.9148;3.6425;3.4841;3.1837 -;-;-;-;-;-;-;-;-;- 1803 1 1.569 149809.3 1.0 14374 5852 20212 HBL1_DMSO_200M_050219_1,20228 HBL1_DMSO_200M_050219_1,20228,LSWNKTVEL True False RFPDLTVEL 98.196228 545.300524890423 8698948.5 20212.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-2|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 5.305431683858235 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20229 98.201 163.0 431490.0 25 0 95054.0 + 11654 GLAWLALIL 9 104 485.3112810018867 968.6080090705734 2 485.3114501833916 MULTI CID FTMS 0 0 0 20212 126118.5859375 0.7521624138410141 1 -0.0844955444335937 17 Unmodified _GLAWLALIL_ ENSG00000095981|ENST00000437525|KCNK16;nc|ENSG00000095981|Q96T55|KCNK16 28.17323086031832 0.1727213568982648 3 {I|L}{I|L}AAKPM{I|L}{I|L} 9 5 + 27.814 0.0 0.0 2.8715 2.8715 70.619 0.0 0.0 0.0 2.430380486862944 3.8688655385694695 2.430380486862944 2.430380486862944 0 0.8182503180159344 1.3979400086720375 0.0 0.0 {I|L}{I|L}AAKPM{I|L}{I|L};{[VA]|[{I|L}G]}VVKPM{I|L}{I|L};[KP]VCA{I|L}{I|L}{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))K]{I|L}{I|L}{I|L}{I|L};[KP]VRM{I|L}{I|L}{I|L};[KP]VR{I|L}M{I|L}{I|L};{[NV]|[RG]}{[RE]|[WV]}{I|L}{I|L}{I|L}{I|L};[KP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L}{I|L}{I|L};[KP]V[VG]M{I|L}{I|L}{I|L};[KP]V[VG]{I|L}M{I|L}{I|L} 2.8715;2.6206;1.999;1.9208;1.641;1.3302;0.92166;0.88844;0.68476;0.37398 -;-;-;-;-;-;-;-;-;- 296 1 1.569 57903.3 1.0 14375 5852 20212 HBL1_DMSO_200M_050219_1,20229 HBL1_DMSO_200M_050219_1,20229,GLAWLALIL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20231 98.206 77.0 638050.0 25 0 93313.0 + 9860 FPFGYVSNI 9 76 522.2638698765668 1042.5131868199337 2 522.2635375857353 MULTI CID FTMS 0 0 0 20230 464533.59375 0.7033283990982679 2 -0.1339340209960937 1 Unmodified _FPFGYVSNI_ ENSG00000159259|ENST00000314103|CHAF1B;ENST00000481458.1_1_21:37771819-37785123:+|nuORF 42.96799951952854 0.0591636306142405 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}V 6 5 37.88 0.0 0.0 3.6336 0.0 0.0 0.0 329.1477808237191 329.1477808237191 20.652165235758595 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}V 3.6336 - 236 1 1.573 46718.9 1.0 14376 5853 20230 HBL1_DMSO_200M_050219_1,20231 HBL1_DMSO_200M_050219_1,20231,FPFGYVSNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20232 98.211 260.0 564300.0 25 0 26604.0 -1 0 105 791.372936740873 2371.0969808228188 3 791.7095214724541 MULTI CID FTMS 0 0 0 20230 346546.34375 0.360219183290144 17 -1.6124954223632812 2 3 {[HG]|PP}APPGDCNRAGM 13 -1 44.169 0.0 0.0 1.8628 0.0 0.0 0.0 1104.5456403077687 1104.5456403077687 7.2718571098943485 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.6549471895720984 0.0 {[HG]|PP}APPGDCNRAGM 1.8628 - 21847 1 1.573 108051.4 1.0 14377 5853 20230 HBL1_DMSO_200M_050219_1,20232 HBL1_DMSO_200M_050219_1,20232, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20234 98.216 42.0 1017700.0 25 0 83833.0 + 1510 ALHSWFQTL 9 85 551.7861803677869 1101.5578078023736 2 551.7862426638603 MULTI CID FTMS 0 0 0 20233 825131.3125 0.5803987197035021 3 -0.4262847900390625 1 Unmodified _ALHSWFQTL_ ENSG00000166986|ENST00000262027|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF;nc|ENSG00000166986|P56192-2|MARS1 36.506200033944 0.094635877243972 3 SW{M(Oxidation (M))|F}QT{I|L} 6 3 37.625 0.0 0.0 3.4156 0.0 0.0 321.181444236525 0.0 321.181444236525 0.0 12.180475292681264 0.0 0.0 0 0.7742275032520141 0.0 0.9247425010840048 0.0 + SW{M(Oxidation (M))|F}QT{I|L} 3.4156 + + 226 1 1.573 42147.8 1.0 14378 5854 20233 HBL1_DMSO_200M_050219_1,20234 HBL1_DMSO_200M_050219_1,20234,ALHSWFQTL True True ALHSWFQTL 98.215571 551.78624266386 24717580.0 20233.0 nc|ENSG00000166986|P56192-2|MARS1;;ENST00000447721.6_1_12:57881873-57905922:+|nuORF;;ENSG00000166986|ENST00000262027|MARS1 8.221396923065186 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20235 98.218 92.0 703100.0 25 0 52486.0 + 37830 KILSELFTV 9 103 525.3155685192608 1048.6165841053214 2 525.3158447146416 MULTI CID FTMS 0 0 0 20233 532961.25 1.0 0 0.0 2 Unmodified _TLTLAAFLSL_ ENSG00000092140|ENST00000206595|G2E3;ENST00000549159.1_1_14:31081376-31085737:+|nuORF 36.12702656103203 0.1984647928738587 3 {[TV]|[{I|L}S]}E{I|L}K{I|L}{M(Oxidation (M))|F}TV 9 7 + 61.092 0.0 0.0 5.826 5.826 82.245 0.0 0.0 0.0 4.510365488874939 9.577570906191896 4.510365488874939 4.510365488874939 0 0.7429928190999391 1.3010299956639813 0.6549471895720984 0.0 {[TV]|[{I|L}S]}E{I|L}K{I|L}{M(Oxidation (M))|F}TV;[{I|L}T]D{I|L}K{I|L}{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}E{I|L}K{M(Oxidation (M))|F}{I|L}TV;[{I|L}T]D{I|L}K{M(Oxidation (M))|F}{I|L}TV;{[TV]|[{I|L}S]}E{I|L}{M(Oxidation (M))|F}K{I|L}TV;[{I|L}T]D{I|L}{M(Oxidation (M))|F}K{I|L}TV;{[TV]|[{I|L}S]}E{M(Oxidation (M))|F}{I|L}K{I|L}TV;[{I|L}T]D{M(Oxidation (M))|F}{I|L}K{I|L}TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}E{I|L}K{I|L}TV;[K{I|L}]{I|L}{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}TV 5.826;5.3959;5.2056;4.7755;4.7506;4.3205;4.2956;3.8655;3.7173;2.7209 -;-;-;-;-;-;-;-;-;- 462 1 1.573 59538.3 1.0 14379 5854 20233 HBL1_DMSO_200M_050219_1,20235 HBL1_DMSO_200M_050219_1,20235,TLTLAAFLSL False True KILSELFTV 98.217594 525.315844714642 5465605.0 20233.0 ENSG00000092140|ENST00000206595|G2E3;;ENST00000549159.1_1_14:31081376-31085737:+|nuORF 5.167102018992106 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20236 98.22 90.0 491120.0 25 0 71780.0 + + -1 IVVGMTNGILSV 12 59 601.8443293941974 1201.6741058551947 2 601.8447753787041 MULTI CID FTMS 0 0 0 20233 482928.65625 1.0 0 0.0 3 Carbamidomethyl (C) _SILQLGC(Carbamidomethyl (C))LISV_ nc|ENSG00000164338|Q8TED0-3|UTP15;ENSG00000164338|ENST00000296792|UTP15;ENST00000512550.1_1_5:72868339-72873863:+|nuORF;nc|ENSG00000164338|Q8TED0-2|UTP15 28.49450938151212 0.4231428536161201 3 {I|L}SV 3 -1 35.049 0.0 0.0 2.9167 0.0 0.0 884.4785319799979 0.0 884.4785319799979 0.0 22.285196520196955 0.0 0.0 0 0.9247425010840048 0.0 0.2614393726401688 0.0 {I|L}SV 2.9167 + + 34 + 1 1.573 36989.7 1.0 14380 5854 20233 HBL1_DMSO_200M_050219_1,20236 HBL1_DMSO_200M_050219_1,20236,SILQLGCLISV False False IVVGMTNGILSV 98.219592 601.844775378704 5925343.5 20233.0 nc|ENSG00000164338|Q8TED0-3|UTP15;;ENSG00000164338|ENST00000296792|UTP15;;ENST00000512550.1_1_5:72868339-72873863:+|nuORF;;nc|ENSG00000164338|Q8TED0-2|UTP15 5.782367547353108 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20237 98.224 209.0 571150.0 25 0 75921.0 + 35125 SQYPFPVTL 9 84 1051.546045185399 1050.538768718799 1 1051.546191394329 MULTI CID FTMS 0 0 0 20233 315253.65625 0.2278188164055467 -3 0.263092041015625 4 Unmodified _SQYPFPVTL_ ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-2|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L 128.93241758739586 0.006154487147897 3 {[QS]|[NT]}YP{M(Oxidation (M))|F}PVT{I|L} 9 0 + 94.538 0.0 0.0 8.999 8.999 96.966 0.0 0.0 0.0 28.30322086726595 46.28854390427668 28.30322086726595 16.9181547698838 0 2.2302046884880937 0.0 1.6278623208748888 0.9124379954164592 + + {[QS]|[NT]}YP{M(Oxidation (M))|F}PVT{I|L};{[QS]|[NT]}PY{M(Oxidation (M))|F}PVT{I|L};{[QS]|[NT]}YPVP{M(Oxidation (M))|F}T{I|L};{[QS]|[NT]}YPK{[QS]|[NT]}T{I|L};[VP]T{I|L}M[YN]T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{[QS]|[NT]}PVT{I|L};[VP]TNYP{M(Oxidation (M))|F}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QS]|[NT]}{M(Oxidation (M))|F}PVT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PVT[YN]T{I|L};{[QS]|[NT]}YPVPT{M(Oxidation (M))|F}{I|L} 8.999;7.3886;6.607;6.431;6.2724;5.9094;5.5032;5.4695;5.2913;5.0844 +;-;-;-;-;-;-;-;-;- + 2302 1 1.573 78831.5 1.0 14381 5854 20233 HBL1_DMSO_200M_050219_1,20237 HBL1_DMSO_200M_050219_1,20237,SQYPFPVTL True True SQYPFPVTL 98.223598 1051.54619139433 85717504.0 20233.0 nc|ENSG00000152061|Q5R372-4|RABGAP1L;;ENSG00000152061|ENST00000681986|RABGAP1L;;nc|ENSG00000152061|Q5R372-3|RABGAP1L;;nc|ENSG00000152061|Q5R372-2|RABGAP1L;;nc|ENSG00000152061|Q5R372|RABGAP1L 8.523710250854492 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20238 98.226 138.0 544360.0 25 0 70103.0 -1 LPCKYCYL 8 109 530.2525408742 1058.4905288152 2 530.2532226443291 MULTI CID FTMS 0 0 0 20233 255802.34375 0.8359597256889307 1 -0.1237716674804687 5 Carbamidomethyl (C) _LPC(Carbamidomethyl (C))KYCYL_ ENST00000441890.5_1_1:154193404-154197599:+|nuORF 15.768221252438446 0.6779680726941459 3 {I|L}M{I|L}M{[TV]|[{I|L}S]}S 7 -1 43.46 0.0 0.0 4.1059 0.0 0.0 0.0 280.10949091859663 280.10949091859663 19.303556944260336 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3494850021680094 0.0 {I|L}M{I|L}M{[TV]|[{I|L}S]}S 4.1059 - 586 + 1 1.573 64428.0 1.0 14382 5854 20233 HBL1_DMSO_200M_050219_1,20238 HBL1_DMSO_200M_050219_1,20238,LPCKYCYL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20239 98.232 283.0 332350.0 25 0 51819.0 + 35900 SVMSILPKI 9 94 494.2990107849781 986.5834686367564 2 494.2990600466728 MULTI CID FTMS 0 0 0 20233 215732.71875 1.0 0 0.0 6 Unmodified _SVMSILPKI_ ENSG00000111897|ENST00000339697|SERINC1 32.78568957990786 0.1150597335874693 3 [VS]MS{I|L}{I|L}PK{I|L} 9 0 + 74.486 0.0 0.0 7.5499 7.5499 94.813 0.0 0.0 0.0 52.48651242028323 9.956130378462476 9.956130378462476 17.20159303405957 0 0.6861818737241735 2.0 0.0 0.0 + + [VS]MS{I|L}{I|L}PK{I|L};[VS]MS{I|L}{I|L}{I|L}[KP] 7.5499;5.8064 +;- + 206 + 1 1.573 78208.4 1.0 14383 5854 20233 HBL1_DMSO_200M_050219_1,20239 HBL1_DMSO_200M_050219_1,20239,SVMSILPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20240 98.245 800.0 167610.0 25 0 3144.6 -1 0 142 1081.5289406307834 3241.56499249255 3 1081.864062488079 MULTI CID FTMS 0 0 0 20233 207598.40625 0.255758420088278 3 -0.4262847900390625 7 3 T{I|L} 2 -1 10.969 0.0 0.0 0.33839 0.0 0.0 374.1866297060222 2650.241906306678 3024.428536012701 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L} 0.33839 - 299 + 1 1.573 82051.5 0.8500000238418579 14384 5854 20233 HBL1_DMSO_200M_050219_1,20240 HBL1_DMSO_200M_050219_1,20240, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20241 98.249 177.0 169130.0 25 0 19624.0 10746 FYIGEHLLPY 10 56 626.3238148475887 1250.6330767619772 2 626.8257324099541 MULTI CID FTMS 0 0 0 20233 176972.21875 1.0 0 0.0 8 Unmodified _FYIGEHLLPY_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000470302.5_1_2:230656574-230657731:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 14.838274106304384 0.5985701837916485 3 {I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4 8 16.198 0.0 0.0 1.2952 0.0 0.0 747.3426991193375 0.0 747.3426991193375 0.0 -5.0 -5.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 1.2952 - 63 1 1.573 29344.8 1.0 14385 5854 20233 HBL1_DMSO_200M_050219_1,20241 HBL1_DMSO_200M_050219_1,20241,FYIGEHLLPY False True AHVEFYLLPY 98.248912 626.3247 2099046.75 20233.0 ENSG00000139144|ENST00000538779|PIK3C2G;;nc|ENSG00000139144|O75747-2|PIK3C2G 1.404543896516164 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20242 98.254 293.0 255090.0 25 0 27403.0 + 41230 VPFSLMQV 8 90 460.7478377636327 919.4811225940654 2 460.7470275759697 MULTI CID FTMS 0 0 0 20233 165227.046875 1.0 0 0.0 9 Unmodified _VPFSLMQV_ ENSG00000109066|ENST00000335464|TMEM104;nc|ENSG00000109066|Q8NE00-2|TMEM104 42.96799951952854 0.1846367511955703 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L}V 5 3 34.481 0.0 0.0 3.7501 0.0 0.0 0.0 373.15089962258907 373.15089962258907 6.990152339223741 0.0 0.0 0.0 0 0.0 1.0 1.305462187404089 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L}V 3.7501 - 305 1 1.573 62635.9 1.0 14386 5854 20233 HBL1_DMSO_200M_050219_1,20242 HBL1_DMSO_200M_050219_1,20242,VPFSLMQV False True VPFSLMQV 98.254269 460.74702757597 1799314.625 20233.0 ENSG00000109066|ENST00000335464|TMEM104;;nc|ENSG00000109066|Q8NE00-2|TMEM104 4.763199965159099 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20243 98.268 800.0 116180.0 25 0 16312.0 + -1 DSRSFFWNV 9 112 579.3517500895935 1735.03342086898 3 579.3520995974541 MULTI CID FTMS 0 0 0 20233 163433.265625 0.9856036884770898 -1 0.010162353515625 10 ENSG00000162736|ENST00000294785|NCSTN;nc|ENSG00000162736|Q92542-2|NCSTN;ENST00000459963.5_1_1:160321502-160323118:+|nuORF 3 SWC(Carbamidomethyl (C)) 3 -1 14.935 0.0 0.0 0.86079 0.0 0.0 722.5853750699551 576.2626436822874 1298.8480187522423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 SWC(Carbamidomethyl (C)) 0.86079 - 179 + 1 1.573 79193.4 0.6800000071525574 14387 5854 20233 HBL1_DMSO_200M_050219_1,20243 HBL1_DMSO_200M_050219_1,20243, False False DSRSFFWNV 98.2681 579.352099597454 327472.96875 20233.0 ENSG00000162736|ENST00000294785|NCSTN;;nc|ENSG00000162736|Q92542-2|NCSTN;;ENST00000459963.5_1_1:160321502-160323118:+|nuORF 4.301633516947429 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20244 98.273 236.0 324260.0 25 0 22308.0 + 45686 YWPDVIHSF 9 102 582.2794758609099 1162.5443987886197 2 582.2781860232353 MULTI CID FTMS 0 0 0 20233 159394.1875 0.9106964310710788 1 -0.1237716674804687 11 Unmodified _YWPDVIHSF_ ENSG00000026297|ENST00000508775|RNASET2;ENST00000028008.9_1_6:167343078-167365992:-|nuORF;ENST00000358165.7_1_6:167352234-167370622:-|nuORF;ENST00000496851.6_1_6:167347386-167366008:-|nuORF;ENST00000499370.6_1_6:167347461-167366008:-|nuORF 34.10243960390752 0.1078313939113124 3 [WY]PDV{I|L}EE{I|L} 9 3 + 54.42 0.0 0.0 4.6811 4.6811 84.069 0.0 0.0 0.0 26.42667503568731 9.420080530223132 9.420080530223132 9.420080530223132 0 0.3054621874040891 2.0 0.805462187404089 0.0 [WY]PDV{I|L}EE{I|L};[WY]PDV{I|L}[HS]{M(Oxidation (M))|F};[WY]PDV[HA]Y{I|L};[WY][{I|L}V]S{M(Oxidation (M))|F}[WY];[WY][MT][{I|L}P]CH{I|L};[WY]P[YE][VG]H{I|L};[WY]PDV[C(Carbamidomethyl (C))K]VP;[DP]V{I|L}HS{M(Oxidation (M))|F}[WY];{NN|[MP]|[D{I|L}]|[EV]}[VP]HS{M(Oxidation (M))|F}[WY];{[TV]|[{I|L}S]}[VP]HD{M(Oxidation (M))|F}[WY] 4.6811;3.8708;3.7979;2.804;2.4545;2.4545;2.2338;1.5531;1.45;1.0848 -;+;-;-;-;-;-;-;-;- + 442 + 1 1.573 62966.1 1.0 14388 5854 20233 HBL1_DMSO_200M_050219_1,20244 HBL1_DMSO_200M_050219_1,20244,YWPDVIHSF True True YWPDVIHSF 98.272531 582.278186023235 2520382.75 20233.0 ENST00000499370.6_1_6:167347461-167366008:-|nuORF;;ENST00000496851.6_1_6:167347386-167366008:-|nuORF;;ENST00000028008.9_1_6:167343078-167365992:-|nuORF;;ENST00000358165.7_1_6:167352234-167370622:-|nuORF;;ENSG00000026297|ENST00000508775|RNASET2 4.782745361328125 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20245 98.28 427.0 225250.0 25 0 16648.0 + 19712 KMGLIFEV 8 115 468.7645685756756 935.5145842181512 2 468.7646667361259 MULTI CID FTMS 0 0 0 20233 130346.96875 0.8938283118430184 1 -0.1237716674804687 12 Unmodified _LGMLKFVE_ ENSG00000086598|ENST00000262225|TMED2 32.116972079565 0.368454113111938 3 {[VA]|[{I|L}G]}MK{I|L}{M(Oxidation (M))|F}EV 8 4 + 44.325 0.0 0.0 4.738 4.738 74.934 0.0 0.0 0.0 11.650958747542193 2.04628427264403 2.04628427264403 2.04628427264403 0 0.8441876774005248 1.0969100130080565 0.0 0.0 {[VA]|[{I|L}G]}MK{I|L}{M(Oxidation (M))|F}EV;{[VA]|[{I|L}G]}MK{I|L}{M(Oxidation (M))|F}D{I|L};{[VA]|[{I|L}G]}M{I|L}K{M(Oxidation (M))|F}EV;{[VA]|[{I|L}G]}M{I|L}K{M(Oxidation (M))|F}D{I|L};{[VA]|[{I|L}G]}{I|L}MK{M(Oxidation (M))|F}EV;{[VA]|[{I|L}G]}MK{M(Oxidation (M))|F}{I|L}EV;{[VA]|[{I|L}G]}{I|L}MK{M(Oxidation (M))|F}D{I|L};{[VA]|[{I|L}G]}MK{M(Oxidation (M))|F}{I|L}D{I|L};{I|L}{I|L}GMK{M(Oxidation (M))|F}EV;{I|L}{I|L}GMK{M(Oxidation (M))|F}D{I|L} 4.738;4.5193;4.1564;3.9377;3.8347;3.7236;3.6159;3.5049;3.4926;3.2739 -;-;-;-;-;-;-;-;-;- 319 1 1.573 79554.0 1.0 14389 5854 20233 HBL1_DMSO_200M_050219_1,20245 HBL1_DMSO_200M_050219_1,20245,LGMLKFVE False False KMGLIFEV 98.280133 468.764666736126 1497602.25 20233.0 ENSG00000086598|ENST00000262225|TMED2 2.461466451485952 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20246 98.292 616.0 151340.0 25 0 25422.0 + 35678 SVEEAFYYI 9 120 560.764067938823 1119.513582944446 2 560.7634155154228 MULTI CID FTMS 0 0 0 20233 128203.796875 1.0 0 0.0 13 Unmodified _SVEEAFYYI_ ENSG00000087274|ENST00000683351|ADD1;ENST00000503169.5_1_4:2877642-2906862:+|nuORF;ENST00000506157.1_1_4:2889441-2900342:+|nuORF;ENST00000508684.5_1_4:2877642-2900342:+|nuORF;ENST00000509039.5_1_4:2877642-2901297:+|nuORF;nc|ENSG00000087274|P35611-2|ADD1;nc|ENSG00000087274|P35611-3|ADD1;nc|ENSG00000087274|P35611-4|ADD1;nc|ENSG00000087274|P35611-5|ADD1;nc|ENSG00000087274|P35611-6|ADD1;nc|ENSG00000087274|P35611|ADD1 23.1484247019978 0.2366544122328345 3 [Y{I|L}]PVSC{I|L}T 8 9 31.196 0.0 0.0 2.7865 0.0 0.0 0.0 240.04694779178763 240.04694779178763 10.005536741948331 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.9247425010840048 0.0 [Y{I|L}]PVSC{I|L}T 2.7865 - 741 1 1.573 77549.8 1.0 14390 5854 20233 HBL1_DMSO_200M_050219_1,20246 HBL1_DMSO_200M_050219_1,20246,SVEEAFYYI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20247 98.306 800.0 265030.0 25 0 16667.0 + 16035 ITIPEIATSEL 11 131 1186.6555384709802 1185.6482620043805 1 1188.054614245892 MULTI CID FTMS 0 0 0 20233 81721.4296875 0.8463279793651616 2 -0.3092193603515625 14 Unmodified _ITIPEIATSEL_ ENSG00000153107|ENST00000341068|ANAPC1 28.49450938151212 0.4231428536161201 3 [EP]{I|L}{I|L}T{I|L}HS{M(Oxidation (M))|F} 9 8 32.373 0.0 0.0 2.7304 0.0 0.0 0.0 145.07853928156388 145.07853928156388 0.5519056734398511 0.0 0.0 0.0 0 0.4604093769761876 0.0 1.1861818737241734 0.0 [EP]{I|L}{I|L}T{I|L}HS{M(Oxidation (M))|F} 2.7304 - 5770 1 1.573 127197.1 0.5299999713897705 14391 5854 20233 HBL1_DMSO_200M_050219_1,20247 HBL1_DMSO_200M_050219_1,20247,ITIPEIATSEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20248 98.32 800.0 128620.0 25 0 13849.0 + 39333 VAFHLPLL 8 141 455.28058082485546 908.546608716511 2 455.2803222537041 MULTI CID FTMS 0 0 0 20233 117299.5859375 1.0 0 0.0 15 Unmodified _VAFHLPLL_ REV__ENSG00000169918|ENST00000307050|OTUD7A;REV__ENSG00000264522|ENST00000581312|OTUD7B;REV__nc|ENSG00000169918|Q8TE49|OTUD7A;REV__nc|ENSG00000264522|Q6GQQ9-2|OTUD7B 24.20995872069341 0.5349487244130675 3 WP[RK]P{I|L} 6 -1 44.759 0.0 0.0 4.9265 0.0 0.0 0.0 128.07203088931877 128.07203088931877 13.895592501361222 0.0 0.0 0.0 0 0.7134679910804405 1.6989700043360187 0.0 0.0 WP[RK]P{I|L} 4.9265 - 211 + 1 1.573 83833.3 0.4300000071525574 14392 5854 20233 HBL1_DMSO_200M_050219_1,20248 HBL1_DMSO_200M_050219_1,20248,VAFHLPLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20249 98.335 800.0 135640.0 25 0 6201.5 -1 0 108 1160.5524193271106 0 1160.195727527142 PEAK CID FTMS 0 0 0 20233 73490.6015625 1.0 0 0.0 16 3 DEN{I|L}{M(Oxidation (M))|F}AY 7 -1 37.199 0.0 0.0 1.604 0.0 0.0 1175.619412773559 288.09931360416255 1463.7187263777212 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 DEN{I|L}{M(Oxidation (M))|F}AY 1.604 - 718 + 1 1.573 63214.5 0.5199999809265137 14393 5854 20233 HBL1_DMSO_200M_050219_1,20249 HBL1_DMSO_200M_050219_1,20249, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20251 98.339 51.0 914750.0 25 0 160620.0 -1 ILYQAMDII 9 65 548.2896035399236 1094.5646541466472 2 548.2904540896416 MULTI CID FTMS 0 0 0 20250 835430.6875 0.5002742230210507 1 -0.1854476928710937 1 Oxidation (M) _ILYQAM(Oxidation (M))DII_ ENSG00000185238|ENST00000331079|PRMT3;nc|ENSG00000185238|O60678-2|PRMT3 19.438996006549623 0.310492472477042 3 [Y{I|L}]{I|L}{I|L} 4 -1 26.911 0.0 0.0 2.4586 0.0 0.0 0.0 589.2246937797128 589.2246937797128 8.979400086720371 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [Y{I|L}]{I|L}{I|L} 2.4586 - 140 1 1.573 43772.8 1.0 14394 5855 20250 HBL1_DMSO_200M_050219_1,20251 HBL1_DMSO_200M_050219_1,20251,ILYQAMDII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20252 98.342 109.0 589990.0 25 0 62078.0 + 21282 LPEDLYHLI 9 74 556.8026297314055 1111.590706529611 2 556.8032104372978 MULTI CID FTMS 0 0 0 20250 429864.375 0.4995131841186613 1 -0.1854476928710937 2 Unmodified _LPEDLYHLI_ ENSG00000110700|ENST00000525634|RPS13;ENST00000458227.1_1_2:25191966-25192092:-|nuORF;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000531908.5_1_11:17095982-17097186:-|nuORF 57.47134341890925 0.0274820932774257 3 {I|L}PED{I|L}YH{I|L}{I|L} 9 0 + 84.928 0.0 0.0 7.6403 7.6403 93.957 0.0 0.0 0.0 60.033929436050045 10.908458057352192 10.908458057352192 11.989700043360187 0 1.6505149978319906 2.0 0.0 0.0 + + {I|L}PED{I|L}YH{I|L}{I|L};{I|L}PED{I|L}Y{I|L}H{I|L};{I|L}PE[H{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L} 7.6403;6.5617;4.2242 +;-;- + 381 + 1 1.573 54173.5 1.0 14395 5855 20250 HBL1_DMSO_200M_050219_1,20252 HBL1_DMSO_200M_050219_1,20252,LPEDLYHLI True True LPEDLYHLI 98.341649 556.803210437298 13695797.0 20250.0 ENST00000458227.1_1_2:25191966-25192092:-|nuORF;;ENSG00000110700|ENST00000525634|RPS13;;ENST00000531908.5_1_11:17095982-17097186:-|nuORF;;ENST00000526895.5_1_11:17095982-17099246:-|nuORF 6.737498283386231 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20253 98.344 108.0 1201400.0 25 0 85748.0 + 35126 SQYPFPVTL 9 146 526.2768031737937 1050.5390534143874 2 526.2768432497978 MULTI CID FTMS 0 0 0 20250 542041.4375 0.3897909106018708 -1 0.1237716674804687 3 Unmodified _SQYPFPVTL_ ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-2|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L 40.23920728925047 0.0741434193262949 3 {I|L}{I|L}RPVT{I|L} 7 5 50.123 0.0 0.0 4.7711 0.0 0.0 240.0059943364925 0.0 240.0059943364925 0.0 23.42322381508107 0.0 0.0 0 1.1237125054200234 0.0 1.1886218330464624 0.3054621874040891 {I|L}{I|L}RPVT{I|L} 4.7711 - 942 + 1 1.573 104314.6 1.0 14396 5855 20250 HBL1_DMSO_200M_050219_1,20253 HBL1_DMSO_200M_050219_1,20253,SQYPFPVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20254 98.347 157.0 684910.0 25 0 80601.0 + 36550 TALAQIMTI 9 112 481.27278142206296 960.531009910926 2 481.2730895876884 MULTI CID FTMS 0 0 0 20250 451492.15625 0.136236592984976 -2 0.1339340209960937 4 Unmodified _TALAQIMTI_ ENSG00000097046|ENST00000234626|CDC7 100.37149154755038 0.0107586824602606 3 [TA]{I|L}AQ{I|L} 6 3 56.434 0.0 0.0 5.8753 0.0 0.0 0.0 360.1586134971107 360.1586134971107 29.082566916637653 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 1.5044321917401078 0.5649093276264391 + [TA]{I|L}AQ{I|L} 5.8753 + + 889 1 1.573 83779.2 1.0 14397 5855 20250 HBL1_DMSO_200M_050219_1,20254 HBL1_DMSO_200M_050219_1,20254,TALAQIMTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20255 98.351 223.0 356480.0 25 0 42841.0 + 39519 VAVALTPVL 9 95 441.78650245405794 881.5584519749159 2 441.7867309451103 MULTI CID FTMS 0 0 0 20250 367349.375 1.0 0 0.0 5 Unmodified _VAVALTPVL_ REV__ENSG00000196341|ENST00000641015|OR8D1 26.34127834903884 0.1960301806784604 3 {[VA]|[{I|L}G]}V 3 -1 19.181 0.0 0.0 2.1758 0.0 0.0 0.0 609.3607950747784 609.3607950747784 3.076512587389644 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 {[VA]|[{I|L}G]}V 2.1758 + + 240 1 1.573 71491.9 1.0 14398 5855 20250 HBL1_DMSO_200M_050219_1,20255 HBL1_DMSO_200M_050219_1,20255,VAVALTPVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20256 98.365 800.0 220600.0 25 0 9536.4 -1 0 146 799.6372437539173 3194.519869149269 4 800.1392089724541 MULTI CID FTMS 0 0 0 20250 186691.953125 0.3053955939020488 -2 0.1339340209960937 6 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 66.604 0.0 0.0 2.0849 0.0 0.0 0.0 2153.897107829137 2153.897107829137 36.07091086849259 0.0 0.0 0.0 0 1.5 1.3979400086720375 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.0849 - 1195 1 1.573 126671.2 0.7200000286102295 14399 5855 20250 HBL1_DMSO_200M_050219_1,20256 HBL1_DMSO_200M_050219_1,20256, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20257 98.373 457.0 367030.0 25 0 22528.0 -1 QVLMKSQKGSL 11 151 617.8437168089148 1233.6728806846295 2 617.8428832888603 MULTI CID FTMS 0 0 0 20250 174639.125 0.3401951044965249 -1 0.1237716674804687 7 Oxidation (M) _QVLM(Oxidation (M))KSQKGSL_ ENSG00000183840|ENST00000329321|GPR39 34.93206674587334 0.2904649469012649 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV]{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 10 -1 + 36.371 0.0 0.0 2.9482 2.9482 74.725 0.0 0.0 0.0 5.180081581822865 5.180081581822865 5.180081581822865 5.180081581822865 0 0.7742275032520141 0.9208187539523752 0.6549471895720984 0.6549471895720985 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV]{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}PKY{I|L};[{I|L}P]K{I|L}GS{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[KP]{I|L}{I|L}GS{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[{I|L}P]KG{I|L}S{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[{I|L}P]EKK{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[KP]{I|L}G{I|L}S{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[VA]|[{I|L}G]}G{I|L}[RV]{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[{I|L}P]K{I|L}RTS{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[{I|L}P]T[RK]{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 2.9482;2.5283;2.4374;2.2575;2.2404;2.134;2.0605;2.0394;1.9774;1.89 -;-;-;-;-;-;-;-;-;- 3882 1 1.573 124806.7 1.0 14400 5855 20250 HBL1_DMSO_200M_050219_1,20257 HBL1_DMSO_200M_050219_1,20257,QVLMKSQKGSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20258 98.381 463.0 312930.0 25 0 22916.0 + 7878 ELLVSGPPFL 10 137 536.3058675216381 1070.597182110076 2 536.3038818240166 MULTI CID FTMS 0 0 0 20250 150785.671875 0.2440681296836312 -4 0.3868637084960937 8 Unmodified _ELLVSGPPFL_ REV__ENST00000537802.5_1_13:111301211-111301460:-|nuORF 46.020951573049366 0.1035046897853725 3 {[QN]|[E{I|L}]|[KN]}A{[RE]|[WV]}PP{I|L}{M(Oxidation (M))|F} 9 -1 + 41.736 0.0 0.0 3.8984 3.8984 70.368 0.0 0.0 0.0 0.8674820168817732 0.8674820168817732 0.8674820168817732 0.8674820168817732 0 1.4957416651753048 0.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}A{[RE]|[WV]}PP{I|L}{M(Oxidation (M))|F};[{I|L}P]P[YQ]PP{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PP{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{[RE]|[WV]}PP{M(Oxidation (M))|F}{I|L};[{I|L}P]W[W{I|L}]P{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PP{M(Oxidation (M))|F}{I|L};{I|L}{I|L}WWPP{I|L}{M(Oxidation (M))|F};[{I|L}P]W[RP][KQ]{M(Oxidation (M))|F};[{I|L}P]P[WR][KQ]{M(Oxidation (M))|F};[{I|L}P]P[QT]{I|L}[KQ]{M(Oxidation (M))|F} 3.8984;3.8174;3.6912;2.9935;2.8143;2.7863;2.7666;2.4837;2.4147;2.1762 -;-;-;-;-;-;-;-;-;- 1029 + 1 1.573 121563.1 1.0 14401 5855 20250 HBL1_DMSO_200M_050219_1,20258 HBL1_DMSO_200M_050219_1,20258,ELLVSGPPFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20259 98.389 451.0 345910.0 25 0 69034.0 + + 18568 KVIPTLALL 9 130 484.3308788947784 966.6472048563568 2 484.3310424685478 MULTI CID FTMS 0 0 0 20250 147615.328125 0.6084634646819462 -1 0.1237716674804687 9 Unmodified _LAALVALALL_ nc|ENSG00000115514|O14530-2|TXNDC9;ENSG00000115514|ENST00000264255|TXNDC9;ENST00000463385.5_1_2:99938416-99949470:-|nuORF 40.44857923139169 0.1528301697436547 3 AEP{I|L}AR{I|L}{I|L} 8 -1 48.974 0.0 0.0 5.0664 0.0 0.0 85.08994490791171 0.0 85.08994490791171 0.0 29.83361156570448 0.0 0.0 0 0.4247425010840047 0.0 1.1184151806525389 0.0 AEP{I|L}AR{I|L}{I|L} 5.0664 - 1089 1 1.573 121351.1 1.0 14402 5855 20250 HBL1_DMSO_200M_050219_1,20259 HBL1_DMSO_200M_050219_1,20259,LAALVALALL False False KVIPTLALL 98.389428 484.331042468548 2653794.5 20250.0 nc|ENSG00000115514|O14530-2|TXNDC9;;ENSG00000115514|ENST00000264255|TXNDC9;;ENST00000463385.5_1_2:99938416-99949470:-|nuORF 2.8929595947265625 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20260 98.403 800.0 163120.0 25 0 15252.0 + 3147 AVRGMFLL 8 136 453.7651858934143 905.5158188536286 2 453.7656738162041 MULTI CID FTMS 0 0 0 20250 149821.796875 1.0 0 0.0 10 Unmodified _AVRGMFLL_ REV__ENSG00000099937|ENST00000215727|SERPIND1 11.114462752807354 0.7467182956244686 3 {[VA]|[{I|L}G]}V[EP]PVVP 9 -1 + 38.54 0.0 0.0 4.2561 4.2561 72.678 0.0 0.0 0.0 19.66113029490928 9.867574738500345 9.867574738500345 1.706962271689754 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}V[EP]PVVP;{[VA]|[{I|L}G]}W[HV]VVP;{[VA]|[{I|L}G]}V[WH]VVP;{I|L}{I|L}SS[YK]VP 4.2561;4.0676;3.8731;2.0848 -;-;-;- 280 1 1.573 104334.3 0.8399999737739563 14403 5855 20250 HBL1_DMSO_200M_050219_1,20260 HBL1_DMSO_200M_050219_1,20260,AVRGMFLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20261 98.418 800.0 46522.0 25 0 7539.5 -1 0 79 1085.368090808392 0 1085.368090808392 PEAK CID FTMS 0 0 0 -1 0 11 3 {I|L} 1 -1 6.9897 0.0 0.0 0.3223 0.0 0.0 1306.3914189603263 746.2279146783811 2052.619333638708 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.3223 - 16 + 1 1.573 31662.1 0.7400000095367432 14404 5855 20250 HBL1_DMSO_200M_050219_1,20261 HBL1_DMSO_200M_050219_1,20261, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20262 98.432 800.0 60320.0 25 0 6638.2 -1 0 107 648.0567873420315 1941.1485326262944 3 648.7251464724541 MULTI CID FTMS 0 0 0 20250 115836.6328125 1.0 0 0.0 12 3 {[QN]|[E{I|L}]|[KN]}P 3 -1 11.471 0.0 0.0 0.59092 0.0 0.0 0.0 1598.9458098081882 1598.9458098081882 1.0919410875342468 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 {[QN]|[E{I|L}]|[KN]}P 0.59092 - 94 1 1.573 61973.5 0.5600000023841858 14405 5855 20250 HBL1_DMSO_200M_050219_1,20262 HBL1_DMSO_200M_050219_1,20262, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20263 98.447 800.0 183870.0 25 0 16527.0 + 10625 FVNDIFERI 9 145 576.805936717175 1151.59732050115 2 576.8074218630791 MULTI CID FTMS 0 0 0 20250 103921.0625 0.0029552884248974 19 -1.6681747436523438 13 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 51.41523569358685 0.0372669606867193 3 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L} 9 0 + 76.748 0.0 0.0 6.6645 6.6645 89.848 0.0 0.0 0.0 58.50366861547302 11.706962271689749 11.706962271689749 9.208187539523747 0 1.274227503252014 0.0 0.2396518287104437 0.3807196863200844 + + {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}WV{I|L};{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}W{I|L}V;{M(Oxidation (M))|F}V{I|L}DN{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VND{I|L}{I|L}{[RE]|[WV]}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HA]{I|L}{I|L}DNVE;{M(Oxidation (M))|F}VND{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}T{I|L};{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}WV{I|L};{M(Oxidation (M))|F}V{I|L}DGG{M(Oxidation (M))|F}ER{I|L} 6.6645;5.8649;5.6493;5.5106;5.2932;5.1892;5.0362;4.8511;4.5191;4.4936 +;-;-;-;-;-;-;-;-;- + 1510 + 1 1.573 114468.2 0.5199999809265137 14406 5855 20250 HBL1_DMSO_200M_050219_1,20263 HBL1_DMSO_200M_050219_1,20263,FVNDIFERI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20264 98.451 216.0 276100.0 25 0 41097.0 + + 23586 LPYVGMVTII 10 95 559.8135474975962 1117.6125420619924 2 561.3176757693291 MULTI CID FTMS 0 0 0 20250 107088.96875 0.5892610925787359 -1 0.1237716674804687 14 Unmodified _LTNNCSLKLL_ ENST00000591406.1_1_18:56822908-56825914:+|nuORF;ENSG00000166562|ENST00000587834|SEC11C 13.042465956692816 0.6287021003332052 3 SA{M(Oxidation (M))|F}{I|L}[RH]Y{I|L} 8 -1 30.087 0.0 0.0 2.692 0.0 0.0 112.07813151687364 0.0 112.07813151687364 0.0 8.677178039949176 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SA{M(Oxidation (M))|F}{I|L}[RH]Y{I|L} 2.692 - 809 + 1 1.573 52410.1 1.0 14407 5855 20250 HBL1_DMSO_200M_050219_1,20264 HBL1_DMSO_200M_050219_1,20264,LTNNCSLKLL False False LPYVGMVTII 98.451217 561.317675769329 3343568.75 20250.0 ENST00000591406.1_1_18:56822908-56825914:+|nuORF;;ENSG00000166562|ENST00000587834|SEC11C 0.9816490610440572 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20265 98.464 717.0 263070.0 25 0 23349.0 + -1 NVLESLHLV 9 189 512.2170727525403 1022.4195925718806 2 512.2173339724541 MULTI CID FTMS 0 0 0 20250 96410.484375 0.5277552876276842 4 -0.477783203125 15 Carbamidomethyl (C) _C(Carbamidomethyl (C))LCPAEMTV_ nc|ENSG00000165891|Q96AV8-3|E2F7;ENSG00000165891|ENST00000322886|E2F7;ENST00000551558.1_1_12:77439797-77459307:-|nuORF;nc|ENSG00000165891|Q96AV8-2|E2F7 30.22481116460888 0.1466181017706357 3 {[WS]|[C(Carbamidomethyl (C)){I|L}]}Q 3 -1 24.978 0.0 0.0 2.443 0.0 0.0 0.0 618.2116793268186 618.2116793268186 4.2001678146703725 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}Q 2.443 - 1248 + 1 1.573 143552.3 1.0 14408 5855 20250 HBL1_DMSO_200M_050219_1,20265 HBL1_DMSO_200M_050219_1,20265,CLCPAEMTV False False NVLESLHLV 98.463667 512.217333972454 876778.875 20250.0 nc|ENSG00000165891|Q96AV8-3|E2F7;;ENSG00000165891|ENST00000322886|E2F7;;ENST00000551558.1_1_12:77439797-77459307:-|nuORF;;nc|ENSG00000165891|Q96AV8-2|E2F7 3.8616034189860025 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20266 98.477 800.0 132690.0 25 0 11016.0 + 34636 SPNAGGAP 8 150 335.6608154464996 669.3070779597991 2 335.6603271365166 MULTI CID FTMS 0 0 0 20250 94232.6484375 1.0 0 0.0 16 Unmodified _SPNAGGAP_ REV__ENST00000519699.1_1_8:8999160-9009036:-|nuORF 0.6014990680409731 0.820681427635312 3 {M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L} 5 -1 + 8.6967 0.0 0.0 1.2994 1.2994 75.999 0.0 0.0 0.0 4.717262228329558 0.3518325094788253 0.3518325094788253 8.696662315049933 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L} 1.2994 - 32 + 1 1.573 86229.1 0.3700000047683716 14409 5855 20250 HBL1_DMSO_200M_050219_1,20266 HBL1_DMSO_200M_050219_1,20266,SPNAGGAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20267 98.493 800.0 130780.0 25 0 12361.0 -1 0 85 1012.7781392896476 0 1012.571459949017 PEAK CID FTMS 0 0 0 20250 53007.05859375 0.9714041607041742 -1 0.1237716674804687 17 3 W 1 -1 6.9897 0.0 0.0 0.34542 0.0 0.0 1225.0925201791013 609.3597364271981 1834.4522566062992 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.34542 - 79 + 1 1.573 68713.5 0.4799999892711639 14410 5855 20250 HBL1_DMSO_200M_050219_1,20267 HBL1_DMSO_200M_050219_1,20267, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20268 98.506 800.0 128920.0 25 0 17533.0 + 19994 LILEPSLYTV 10 111 1147.6616496312597 1146.6543731646598 1 1147.768359363079 MULTI CID FTMS 0 0 0 -1 0 18 Unmodified _LILEPSLYTV_ ENSG00000111481|ENST00000262061|COPZ1;ENST00000551412.5_1_12:54718935-54741629:+|nuORF;ENST00000553009.5_1_12:54718935-54736154:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1 74.92900055777586 0.0187778523875693 3 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}[PS]{I|L}YTV 10 2 + 63.193 0.0 0.0 5.511 5.511 80.364 0.0 0.0 0.0 7.269987279362624 24.02552459836165 7.269987279362624 3.7628749457997657 0 0.5 0.0 1.579689690656103 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}[PS]{I|L}YTV;{[QN]|[E{I|L}]|[KN]}{I|L}[PS]{I|L}{I|L}YTV;{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}[PS]Y{I|L}TV;{[QN]|[E{I|L}]|[KN]}{I|L}[PS]{I|L}Y{I|L}TV;{[QN]|[E{I|L}]|[KN]}P{[TV]|[{I|L}S]}{I|L}{I|L}YTV;{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}[PS]YT{I|L}V;{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}Y[PS]{I|L}TV;{[QN]|[E{I|L}]|[KN]}{I|L}[PS]Y{I|L}{I|L}TV;{[QN]|[E{I|L}]|[KN]}P{[TV]|[{I|L}S]}{I|L}Y{I|L}TV;{[QN]|[E{I|L}]|[KN]}{I|L}[PS]{I|L}YT{I|L}V 5.511;5.1829;5.0789;4.7507;4.6578;4.3653;4.3307;4.2724;4.2256;4.0371 -;-;-;-;-;-;-;-;-;- 1157 1 1.573 68299.7 0.5699999928474426 14411 5855 20250 HBL1_DMSO_200M_050219_1,20268 HBL1_DMSO_200M_050219_1,20268,LILEPSLYTV True False LILEPSLYTV 98.506367 1147.76835936308 4633228.875 20250.0 ENST00000551412.5_1_12:54718935-54741629:+|nuORF;;ENSG00000111481|ENST00000262061|COPZ1;;ENST00000553009.5_1_12:54718935-54736154:+|nuORF;;nc|ENSG00000111481|P61923-5|COPZ1 7.672080198923747 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20269 98.52 800.0 126940.0 25 0 13188.0 -1 0 111 1075.527535065837 3223.560775797711 3 1075.856738269329 MULTI CID FTMS 0 0 0 20250 74708.5390625 0.6260830937079346 -1 0.1237716674804687 19 3 MVM{[QV]|[N{I|L}]|[RA]|[KV]} 5 -1 22.218 0.0 0.0 0.68925 0.0 0.0 2617.259989035715 0.0 2617.259989035715 0.0 16.276362525516532 0.0 0.0 0 0.0 0.0 0.0 0.0 MVM{[QV]|[N{I|L}]|[RA]|[KV]} 0.68925 - 123 1 1.573 69437.0 0.5799999833106995 14412 5855 20250 HBL1_DMSO_200M_050219_1,20269 HBL1_DMSO_200M_050219_1,20269, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20271 98.525 14.0 3905800.0 25 0 599350.0 + 4024 DALRSILTI 9 63 501.3030275794831 1000.591502225766 2 501.3033935427666 MULTI CID FTMS 0 0 0 20270 4204167.5 0.0307330381149345 9 -0.985382080078125 1 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 36.506200033944 0.094635877243972 3 {[DA]|[EG]}[R{I|L}]S{I|L}{I|L}T{I|L} 9 0 + 61.137 0.0 0.0 6.1101 6.1101 82.797 0.0 0.0 0.0 4.259687322722812 16.478174818886373 4.259687322722812 4.259687322722812 0 0.9247425010840048 1.3979400086720375 0.3807196863200844 0.0 + + {[DA]|[EG]}[R{I|L}]S{I|L}{I|L}T{I|L};[{I|L}A][RD]S{I|L}{I|L}T{I|L} 6.1101;5.6843 +;- + 61 1 1.573 48659.8 1.0 14413 5856 20270 HBL1_DMSO_200M_050219_1,20271 HBL1_DMSO_200M_050219_1,20271,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20272 98.526 30.0 2781500.0 25 0 352920.0 + 20038 LIPDIDLKL 9 68 520.322988589831 1038.6314242464618 2 520.3238403201103 MULTI CID FTMS 0 0 0 20270 2067760.375 0.7373805016747663 3 -0.2923355102539062 2 Unmodified _LIPDIDLKL_ ENSG00000173473|ENST00000254480|SMARCC1 32.78568957990786 0.1150597335874693 3 {I|L}{I|L}PD{I|L}D{I|L}K{I|L} 9 0 + 61.621 0.0 0.0 5.9329 5.9329 88.378 0.0 0.0 0.0 5.929862658764264 12.98332479720628 5.929862658764264 9.49092531119419 0 0.3807196863200844 2.0 0.0 0.2742275032520141 + + {I|L}{I|L}PD{I|L}D{I|L}K{I|L};{I|L}{I|L}{I|L}[DP]D{I|L}K{I|L} 5.9329;5.0191 +;- + 116 + 1 1.573 68563.3 1.0 14414 5856 20270 HBL1_DMSO_200M_050219_1,20272 HBL1_DMSO_200M_050219_1,20272,LIPDIDLKL True True LIPDIDLKL 98.525961 520.32384032011 274405360.0 20270.0 ENSG00000173473|ENST00000254480|SMARCC1 3.926613370577494 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20273 98.527 39.0 1875800.0 25 0 350930.0 + 34068 SLLENLEKI 9 79 529.8088423717481 1057.6031318102962 2 529.8085204958916 MULTI CID FTMS 0 0 0 20270 1629901.5 0.5905138541835363 -1 0.1854476928710937 3 Unmodified _SLLENLEKI_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000553444.1_1_14:21679384-21680083:-|nuORF;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 41.95555342248728 0.0647214845423414 3 {[TV]|[{I|L}S]}{I|L}EN{I|L}EK{I|L} 9 0 + 73.008 0.0 0.0 6.9031 6.9031 91.002 0.0 0.0 0.0 12.270025382499924 11.271211393095257 11.271211393095257 9.208187539523756 0 0.805462187404089 2.0 0.7742275032520141 0.0 + + {[TV]|[{I|L}S]}{I|L}EN{I|L}EK{I|L};{[TV]|[{I|L}S]}{I|L}EGG{I|L}EK{I|L};{[TV]|[{I|L}S]}{I|L}EN{I|L}GS{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}EGG{I|L}GS{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}[R{M(Oxidation (M))|F}]AGVPV;{[TV]|[{I|L}S]}{I|L}[R{M(Oxidation (M))|F}]QVPV;{[TV]|[{I|L}S]}{I|L}[KS]SEVPV 6.9031;6.0324;5.2213;4.3548;3.1624;3.1141;3.0171 +;-;-;-;-;-;- + 392 + 1 1.573 59780.3 1.0 14415 5856 20270 HBL1_DMSO_200M_050219_1,20273 HBL1_DMSO_200M_050219_1,20273,SLLENLEKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20274 98.528 31.0 2743000.0 25 0 316560.0 + 34396 SLVATLQSL 9 99 466.2766575779523 930.5387622227046 2 466.2769958376884 MULTI CID FTMS 0 0 0 20270 1480739.0 0.884425631242392 -1 0.1854476928710937 4 Unmodified _SLVATLQSL_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27 46.020951573049366 0.0490941689151868 3 {[TV]|[{I|L}S]}VAT 5 4 36.925 0.0 0.0 3.9681 0.0 0.0 0.0 456.2468673739428 456.2468673739428 17.73382780146814 0.0 0.0 0.0 0 0.0 2.0 0.6747425010840047 0.0 + {[TV]|[{I|L}S]}VAT 3.9681 + + 610 1 1.573 71933.1 1.0 14416 5856 20270 HBL1_DMSO_200M_050219_1,20274 HBL1_DMSO_200M_050219_1,20274,SLVATLQSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20275 98.53 55.0 1045000.0 25 0 80694.0 + 44556 YPETLGRLLI 10 68 587.8451913206685 1173.675829708137 2 588.3469726443291 MULTI CID FTMS 0 0 0 20270 847130.1875 1.0 0 0.0 5 Unmodified _YPETLGRLLI_ ENSG00000103184|ENST00000251170|SEC14L5;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 38.17557092003332 0.1768326257063233 3 YPET{I|L} 5 5 63.8 0.0 0.0 5.4359 0.0 0.0 0.0 567.3628669009471 567.3628669009471 36.35274404843592 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 0.3807196863200844 0.0 + YPET{I|L} 5.4359 + + 40 + 1 1.573 53506.8 1.0 14417 5856 20270 HBL1_DMSO_200M_050219_1,20275 HBL1_DMSO_200M_050219_1,20275,YPETLGRLLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20276 98.532 93.0 773880.0 25 0 124890.0 + 2735 ATIGDLIHL 9 90 476.7769568374077 951.5393607416156 2 476.7771789431572 MULTI CID FTMS 0 0 0 20270 585841.1875 0.4576135739515264 1 -0.1170654296875 6 Unmodified _ATIGDLIHL_ ENSG00000165501|ENST00000298288|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF 28.486842064014134 0.1687311288560894 3 [TA]{I|L}G{NN|[MP]|[D{I|L}]|[EV]}{I|L}H{I|L} 9 0 + 52.145 0.0 0.0 5.4801 5.4801 76.429 0.0 0.0 0.0 22.57638152291939 1.4612803567823818 1.4612803567823818 1.4612803567823818 0 0.4247425010840047 2.0 0.4247425010840047 0.3807196863200844 + + [TA]{I|L}G{NN|[MP]|[D{I|L}]|[EV]}{I|L}H{I|L};[TA]{I|L}G{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}H;[VP][KG]{NN|[MP]|[D{I|L}]|[EV]}G{I|L}[PG] 5.4801;5.3265;1.9934 +;-;- + 277 + 1 1.573 58959.6 1.0 14418 5856 20270 HBL1_DMSO_200M_050219_1,20276 HBL1_DMSO_200M_050219_1,20276,ATIGDLIHL False True ATIGDLIHL 98.531763 476.777178943157 37216203.0 20270.0 ENST00000540712.1_1_14:50068361-50081211:+|nuORF;;ENSG00000165501|ENST00000298288|LRR1 4.621705452601115 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20277 98.535 143.0 374200.0 25 0 47274.0 + 16034 ITIPEIATSEL 11 85 593.8315942634963 1185.6486355937925 2 593.8323852419853 MULTI CID FTMS 0 0 0 20270 522926.21875 0.943177753556213 1 -0.1170654296875 7 Unmodified _ITIPEIATSEL_ ENSG00000153107|ENST00000341068|ANAPC1 36.12702656103203 0.2720571796884491 3 {[QN]|[E{I|L}]|[KN]}PAT 5 7 37.091 0.0 0.0 3.1283 0.0 0.0 0.0 671.3608297678737 671.3608297678737 18.36233656534041 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}PAT 3.1283 - 596 1 1.573 43627.9 1.0 14419 5856 20270 HBL1_DMSO_200M_050219_1,20277 HBL1_DMSO_200M_050219_1,20277,ITIPEIATSEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20278 98.537 93.0 672540.0 25 0 85243.0 + 7781 ELGSTEDIYL 10 104 570.2779009932717 1138.541249053343 2 570.2776367068291 MULTI CID FTMS 0 0 0 20270 453150.6875 0.647657724524175 2 -0.215118408203125 8 Unmodified _ELGSTEDIYL_ ENSG00000146122|ENST00000274867|DAAM2;nc|ENSG00000146122|Q86T65-4|DAAM2 10.823927491677226 0.6659270209832991 3 Y{I|L}{I|L}V 4 8 18.047 0.0 0.0 1.5851 0.0 0.0 331.1764552074433 316.0431002252563 647.2195554326996 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}{I|L}V 1.5851 - 239 + 1 1.573 51893.8 1.0 14420 5856 20270 HBL1_DMSO_200M_050219_1,20278 HBL1_DMSO_200M_050219_1,20278,ELGSTEDIYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20279 98.539 84.0 533420.0 25 0 72216.0 + 21456 LPHLPSLEI 9 76 509.8000735842508 1017.5855942353016 2 509.8006164431572 MULTI CID FTMS 0 0 0 20270 451558.4375 0.1133155625747183 7 -0.7119674682617188 9 Unmodified _LPHLPSLEI_ ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2 30.22481116460888 0.1466181017706357 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[PS]KN{I|L} 9 4 + 34.587 0.0 0.0 3.399 3.399 71.665 0.0 0.0 0.0 2.3888208891513685 14.102737437457629 2.3888208891513685 2.3888208891513685 0 0.0 0.0 0.3494850021680094 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[PS]KN{I|L};[{I|L}P]H{I|L}[PS]{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[PS]{I|L}E{I|L};[H{I|L}]P{I|L}[PS]{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[PS]KGG{I|L};[{I|L}A][Y{I|L}][PS]KN{I|L};[{I|L}P]H{I|L}{[ES]|[DT]|[{I|L}C]}[{I|L}P]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}[{I|L}P]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VP[KA];[H{I|L}]P{I|L}{[ES]|[DT]|[{I|L}C]}[{I|L}P]{I|L} 3.399;3.1642;3.1507;2.5893;2.4941;2.2734;1.6925;1.6791;1.3833;1.1176 -;+;-;-;-;-;-;-;-;- + 281 1 1.573 41282.8 1.0 14421 5856 20270 HBL1_DMSO_200M_050219_1,20279 HBL1_DMSO_200M_050219_1,20279,LPHLPSLEI False True LPHLPSLEI 98.538583 509.800616443157 62249468.0 20270.0 ENSG00000088930|ENST00000377191|XRN2;;nc|ENSG00000088930|Q9H0D6-2|XRN2 1.805416742960612 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20280 98.542 169.0 604730.0 25 0 53409.0 + 37579 TLISELVQA 9 121 487.28174389036025 972.5489348475204 2 487.2817260622978 MULTI CID FTMS 0 0 0 20270 295273.8125 0.4177618472002752 -1 0.1854476928710937 10 Unmodified _TLISELVQA_ ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7 85.35673624503755 0.0162188719545379 3 [{I|L}T]DT{I|L}{I|L} 6 6 53.994 0.0 0.0 5.5518 0.0 0.0 0.0 313.15059435363304 313.15059435363304 30.296517645449 0.0 0.0 0.0 0 0.2887254899964357 2.0 1.924742501084005 0.0 [{I|L}T]DT{I|L}{I|L} 5.5518 - 686 1 1.573 80704.9 1.0 14422 5856 20270 HBL1_DMSO_200M_050219_1,20280 HBL1_DMSO_200M_050219_1,20280,TLISELVQA True True TLISELVQA 98.541888 487.281726062298 9811427.0 20270.0 nc|ENSG00000044090|Q14999-2|CUL7;;ENSG00000044090|ENST00000265348|CUL7 5.462831338246663 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20281 98.547 255.0 275300.0 25 0 38167.0 + -1 THCNDEILSL 10 103 601.2770477783645 1200.5395426235289 2 601.2775756716728 MULTI CID FTMS 0 0 0 20270 283321.71875 0.1135102357710922 8 -0.8577423095703125 11 Carbamidomethyl (C) _THC(Carbamidomethyl (C))NDEILSL_ REV__ENSG00000068971|ENST00000164133|PPP2R5B;REV__nc|ENSG00000068971|Q15173-2|PPP2R5B 12.240655878213236 0.6421556946785427 3 {[TV]|[{I|L}S]}{I|L} 3 -1 29.437 0.0 0.0 2.452 0.0 0.0 0.0 884.3163119929226 884.3163119929226 3.53286222516239 0.0 0.0 0.0 0 0.0 2.0 0.1989700043360188 0.0 {[TV]|[{I|L}S]}{I|L} 2.452 + + 204 1 1.573 53316.2 1.0 14423 5856 20270 HBL1_DMSO_200M_050219_1,20281 HBL1_DMSO_200M_050219_1,20281,THCNDEILSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20282 98.55 167.0 310220.0 25 0 33355.0 + 10462 FTIFRTISV 9 76 542.3130699605376 1082.6115869878752 2 542.3137695193291 MULTI CID FTMS 0 0 0 20270 268293.78125 0.3470494253720127 3 -0.2923355102539062 12 Unmodified _FTIFRTISV_ ENSG00000105447|ENST00000253237|GRWD1 40.23920728925047 0.0741434193262949 3 {M(Oxidation (M))|F}{I|L}TE 4 6 35.433 0.0 0.0 3.2729 0.0 0.0 574.3449574201187 0.0 574.3449574201187 0.0 17.329022044314467 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}TE 3.2729 - 48 1 1.573 46840.6 1.0 14424 5856 20270 HBL1_DMSO_200M_050219_1,20282 HBL1_DMSO_200M_050219_1,20282,FTIFRTISV True True FTIFRTISV 98.549931 542.313769519329 15047438.0 20270.0 ENSG00000105447|ENST00000253237|GRWD1 6.795414924621582 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20283 98.556 342.0 286920.0 25 0 41507.0 + 23611 LTPQYLALL 9 118 516.3107676785994 1030.6069824239987 2 516.3108398318291 MULTI CID FTMS 0 0 0 20270 269277.0625 0.5529302066997805 2 -0.215118408203125 13 Unmodified _LTPQYLALL_ ENSG00000048740|ENST00000633077|CELF2;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2 43.85829265575387 0.0542763391141878 3 [{I|L}T]PQY{I|L} 6 3 43.591 0.0 0.0 4.2297 0.0 0.0 0.0 312.19220822009123 312.19220822009123 6.192678106256516 0.0 0.0 0.0 0 0.0 0.9208187539523752 1.6758337024346173 0.0 + [{I|L}T]PQY{I|L} 4.2297 + + 832 1 1.573 78130.4 1.0 14425 5856 20270 HBL1_DMSO_200M_050219_1,20283 HBL1_DMSO_200M_050219_1,20283,LTPQYLALL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20284 98.565 476.0 313390.0 25 0 14387.0 -1 0 101 791.372936740873 2371.0969808228188 3 792.0436279177666 MULTI CID FTMS 0 0 0 20270 250174.96875 0.3259229973845873 18 -1.48272705078125 14 3 PPPPPP{[QN]|[E{I|L}]|[KN]} 8 -1 41.294 0.0 0.0 1.7416 0.0 0.0 1528.665104218641 0.0 1528.665104218641 0.0 7.137740195135962 0.0 0.0 0 0.0 0.0 0.5010912013506126 1.9353167406967968 PPPPPP{[QN]|[E{I|L}]|[KN]} 1.7416 - 5139 + 1 1.573 108563.5 1.0 14426 5856 20270 HBL1_DMSO_200M_050219_1,20284 HBL1_DMSO_200M_050219_1,20284, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20285 98.578 800.0 128000.0 25 0 3017.0 -1 0 124 1081.5289406307834 3241.56499249255 3 1082.195117175579 MULTI CID FTMS 0 0 0 20270 208386.640625 0.2767359605015098 7 -0.7119674682617188 15 3 YDN[{I|L}P]VM[EP] 9 -1 23.082 0.0 0.0 0.71207 0.0 0.0 2165.0307505579776 0.0 2165.0307505579776 0.0 12.597587459137715 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 YDN[{I|L}P]VM[EP] 0.71207 - 268 1 1.573 67635.4 0.8500000238418579 14427 5856 20270 HBL1_DMSO_200M_050219_1,20285 HBL1_DMSO_200M_050219_1,20285, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20286 98.592 800.0 248980.0 25 0 21450.0 + 25307 NAFSENFLEV 10 185 585.2773710598677 1168.5401891865354 2 585.2770263552666 MULTI CID FTMS 0 0 0 20270 184141.3125 0.6970318678113128 -1 0.1854476928710937 16 Unmodified _NAFSENFLEV_ ENSG00000170836|ENST00000305921|PPM1D;ENST00000392995.7_1_17:58734367-58740910:+|nuORF 106.94017166704064 0.0046191154308253 3 {[QG]|[NA]}{M(Oxidation (M))|F}SEN{M(Oxidation (M))|F}{I|L}EV 10 0 + 83.925 0.0 0.0 7.182 7.182 88.831 0.0 0.0 0.0 6.945830421822663 6.945830421822663 6.945830421822663 6.945830421822663 0 0.841129063296272 1.3010299956639813 1.385151878060192 1.829689690656103 + + {[QG]|[NA]}{M(Oxidation (M))|F}SEN{M(Oxidation (M))|F}{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}{M(Oxidation (M))|F}NESA{[QD]|[EN]|[WG]|[KD]|[RS]};{[QG]|[NA]}{M(Oxidation (M))|F}SEGG{M(Oxidation (M))|F}{I|L}EV;{[QG]|[NA]}{M(Oxidation (M))|F}SE{M(Oxidation (M))|F}N{I|L}EV;{[QG]|[NA]}[YE]AN{M(Oxidation (M))|F}{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}{M(Oxidation (M))|F}GGESA{[QD]|[EN]|[WG]|[KD]|[RS]};[{M(Oxidation (M))|F}V]{I|L}{M(Oxidation (M))|F}NASE{[QD]|[EN]|[WG]|[KD]|[RS]};{[MS]|[{M(Oxidation (M))|F}A]}NSEN{M(Oxidation (M))|F}{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}N{M(Oxidation (M))|F}ESA{[QD]|[EN]|[WG]|[KD]|[RS]};GGA{M(Oxidation (M))|F}SEN{M(Oxidation (M))|F}{I|L}EV 7.182;6.5876;6.3977;6.1111;5.8956;5.8033;5.6918;5.6593;5.5167;5.4676 +;-;-;-;-;-;-;-;-;- + 5536 1 1.573 151155.7 0.7300000190734863 14428 5856 20270 HBL1_DMSO_200M_050219_1,20286 HBL1_DMSO_200M_050219_1,20286,NAFSENFLEV True True NAFSENFLEV 98.592287 585.277026355267 2747519.5 20270.0 ENSG00000170836|ENST00000305921|PPM1D;;ENST00000392995.7_1_17:58734367-58740910:+|nuORF 7.685818036397298 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20287 98.606 800.0 127700.0 25 0 7984.3 + 16385 IYQLVESLM 9 124 1095.5742461085067 1094.5669696419068 1 1095.572192370892 MULTI CID FTMS 0 0 0 20270 162351.328125 0.2921897528353175 4 -0.4053421020507812 17 Unmodified _IYQLVESLM_ REV__ENSG00000276234|ENST00000615182|TADA2A;REV__nc|ENSG00000276234|O75478|TADA2A 46.020951573049366 0.0490941689151868 3 [Y{I|L}]{I|L}{I|L}QDSM{I|L} 9 -1 + 93.128 0.0 0.0 8.5082 8.5082 91.05 0.0 0.0 0.0 6.53212513775344 16.478174818886373 6.53212513775344 6.53212513775344 0 1.6549471895720984 1.0969100130080565 1.0994850021680094 0.0 [Y{I|L}]{I|L}{I|L}QDSM{I|L};{I|L}{I|L}Y{I|L}QDSM{I|L};[Y{I|L}]{I|L}Q{I|L}DSM{I|L};[Y{I|L}]{I|L}{I|L}[AG]DSM{I|L};[Y{I|L}]{I|L}QD{I|L}SM{I|L};{I|L}{I|L}YQ{I|L}DSM{I|L};{I|L}{I|L}Y{I|L}[AG]DSM{I|L};[Y{I|L}]{I|L}[AG]{I|L}DSM{I|L};{I|L}{I|L}YQD{I|L}SM{I|L};[Y{I|L}]{I|L}[AG]D{I|L}SM{I|L} 8.5082;7.9114;7.7764;7.6669;7.3405;7.1796;7.0701;6.9351;6.7437;6.4992 -;-;-;-;-;-;-;-;-;- 2432 1 1.573 70049.9 0.7599999904632568 14429 5856 20270 HBL1_DMSO_200M_050219_1,20287 HBL1_DMSO_200M_050219_1,20287,IYQLVESLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20288 98.611 188.0 362410.0 25 0 28872.0 + 17165 KLIPFLEKL 9 117 550.8569109069708 1099.6992688807416 2 550.8578369021416 MULTI CID FTMS 0 0 0 20270 140575.71875 1.0 0 0.0 18 Unmodified _KLIPFLEKL_ ENSG00000137770|ENST00000260327|CTDSPL2;nc|ENSG00000137770|Q05D32-2|CTDSPL2 31.26834338654808 0.1333407332142048 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EK{I|L}{I|L}[K{I|L}] 9 4 + 34.86 0.0 0.0 3.17 3.17 81.665 0.0 0.0 0.0 16.31105604145163 19.87699904074456 16.31105604145163 16.352291752572373 0 0.0 1.154901959985743 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EK{I|L}{I|L}[K{I|L}];[K{I|L}]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}]T{I|L};[K{I|L}]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}K{I|L};[KG][TA]EK{I|L}{I|L}[K{I|L}];[K{I|L}]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[NV]|[RG]}[K{I|L}];[K{I|L}]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KG][R{I|L}] 3.17;1.683;1.6145;1.4517;0.4713;0.31117 -;-;-;-;-;- 316 1 1.573 62919.7 1.0 14430 5856 20270 HBL1_DMSO_200M_050219_1,20288 HBL1_DMSO_200M_050219_1,20288,KLIPFLEKL False True KLIPFLEKL 98.611252 550.857836902142 1262614.5 20270.0 ENSG00000137770|ENST00000260327|CTDSPL2;;nc|ENSG00000137770|Q05D32-2|CTDSPL2 1.979399045308431 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20289 98.623 702.0 189410.0 25 0 19055.0 + 35901 SVMSILPKI 9 147 494.2990107849781 986.5834686367564 2 494.2998535037041 MULTI CID FTMS 0 0 0 20270 135075.046875 0.6261222111214876 2 -0.215118408203125 19 Unmodified _SVMSILPKI_ ENSG00000111897|ENST00000339697|SERINC1 32.78568957990786 0.1150597335874693 3 [VS]MS{I|L}{I|L}PK{I|L} 9 0 + 71.164 0.0 0.0 7.2131 7.2131 87.72 0.0 0.0 0.0 54.30400924012389 11.047575072713151 11.047575072713151 5.752574989159953 0 0.6549471895720985 2.0 0.0 0.0 + + [VS]MS{I|L}{I|L}PK{I|L};[VS]{M(Oxidation (M))|F}A{I|L}{I|L}PK{I|L};[VS]MS{I|L}{I|L}{I|L}[KP];[VS]{M(Oxidation (M))|F}A{I|L}{I|L}{I|L}[KP];[VS]MS{I|L}[KP]{I|L}{I|L};[VS]{M(Oxidation (M))|F}A{I|L}[KP]{I|L}{I|L};[VS]{I|L}{[HG]|PP}HPK{I|L};[VS]{I|L}{[HG]|PP}H{I|L}[KP];[VS]{M(Oxidation (M))|F}[K{I|L}][PA]{I|L}{I|L};[VS]{I|L}{I|L}[K{I|L}]{M(Oxidation (M))|F}[PA] 7.2131;6.6301;5.359;4.7759;4.6267;4.0436;3.9791;2.1249;1.8379;1.6239 +;-;-;-;-;-;-;-;-;- + 443 + 1 1.573 107159.3 1.0 14431 5856 20270 HBL1_DMSO_200M_050219_1,20289 HBL1_DMSO_200M_050219_1,20289,SVMSILPKI True True SVMSILPKI 98.623442 494.299853503704 5846056.0 20270.0 ENSG00000111897|ENST00000339697|SERINC1 5.017791350682576 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20290 98.637 800.0 187810.0 25 0 11351.0 + 9355 FIMEGGAMVL 10 114 1067.5251384394217 1066.5178619728215 1 1067.525439441204 MULTI CID FTMS 0 0 0 20270 122906.2734375 0.0593912399070398 7 -0.7119674682617188 20 Unmodified _FIMEGGAMVL_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 65.23502041540118 0.0228537820337083 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQ{M(Oxidation (M))|F}{I|L}MV{I|L} 9 5 + 54.491 0.0 0.0 5.1093 5.1093 73.595 0.0 0.0 0.0 0.5462187404089036 16.478174818886373 0.5462187404089036 0.5462187404089036 0 0.0 0.0 1.7658715643802767 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQ{M(Oxidation (M))|F}{I|L}MV{I|L};[H{I|L}]YYEMV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQ{I|L}{M(Oxidation (M))|F}MV{I|L};[H{I|L}][WP][DG]MV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQ{M(Oxidation (M))|F}{I|L}VM{I|L};[H{I|L}]YYEVM{I|L};[H{I|L}]H[NG]{M(Oxidation (M))|F}TE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[AG]{M(Oxidation (M))|F}{I|L}MV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQ{I|L}{M(Oxidation (M))|F}VM{I|L};[H{I|L}][WP][DG]VM{I|L} 5.1093;5.0581;4.699;4.5627;4.4701;4.4188;4.3108;4.2459;4.0598;3.9235 -;-;-;-;-;-;-;-;-;- 4013 1 1.573 97278.6 0.6100000143051147 14432 5856 20270 HBL1_DMSO_200M_050219_1,20290 HBL1_DMSO_200M_050219_1,20290,FIMEGGAMVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20292 98.642 21.0 3118100.0 25 0 323200.0 + 36551 TALAQIMTI 9 86 481.27278142206296 960.531009910926 2 481.2732726931572 MULTI CID FTMS 0 0 0 20291 3314030.0 1.0 0 0.0 1 Unmodified _TALAQIMTI_ ENSG00000097046|ENST00000234626|CDC7 71.13359017698441 0.0206607516130725 3 [TA]{I|L}AQ{I|L} 6 3 50.71 0.0 0.0 5.2794 0.0 0.0 0.0 360.16025706905526 360.16025706905526 24.67477275580256 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.524227503252014 0.2614393726401688 + [TA]{I|L}AQ{I|L} 5.2794 + + 465 1 1.573 55429.2 1.0 14433 5857 20291 HBL1_DMSO_200M_050219_1,20292 HBL1_DMSO_200M_050219_1,20292,TALAQIMTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20293 98.643 47.0 1283900.0 25 0 120340.0 + 35127 SQYPFPVTL 9 80 526.2768031737937 1050.5390534143874 2 526.2769042849541 MULTI CID FTMS 0 0 0 20291 1293892.25 0.9304591927037008 1 -0.098052978515625 2 Unmodified _SQYPFPVTL_ ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-2|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L 40.23920728925047 0.0741434193262949 3 {[QS]|[NT]}YP{M(Oxidation (M))|F}PVT{I|L} 9 0 + 48.128 0.0 0.0 4.5813 4.5813 78.586 0.0 0.0 0.0 4.856262308426345 4.856262308426345 4.856262308426345 4.856262308426345 0 1.3182503180159344 0.0 0.0 0.5102396519197265 + + {[QS]|[NT]}YP{M(Oxidation (M))|F}PVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TN{M(Oxidation (M))|F}PVT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{[QS]|[NT]}PVT{I|L};[{I|L}T][MN]YPVT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QS]|[NT]}YPVT{I|L};[{I|L}T][{I|L}T][C(Carbamidomethyl (C))M]VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QS]|[NT]}{M(Oxidation (M))|F}PVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{[QS]|[NT]}PVT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PVY{[QS]|[NT]}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QA]YPVT{I|L} 4.5813;4.119;3.3815;3.2805;3.1385;2.9813;2.852;2.7597;2.5437;2.5168 +;-;-;-;-;-;-;-;-;- + 337 1 1.573 56470.3 1.0 14434 5857 20291 HBL1_DMSO_200M_050219_1,20293 HBL1_DMSO_200M_050219_1,20293,SQYPFPVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20294 98.646 113.0 546850.0 25 0 53696.0 -1 0 73 917.095871020223 2748.2657836608687 3 917.7657958865166 MULTI CID FTMS 0 0 0 20291 683868.375 0.1030685952543149 -2 0.3025131225585937 3 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 53.822 0.0 0.0 1.9584 0.0 0.0 0.0 1707.65237137503 1707.65237137503 17.919562702124452 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9584 - 244 1 1.573 50174.2 1.0 14435 5857 20291 HBL1_DMSO_200M_050219_1,20294 HBL1_DMSO_200M_050219_1,20294, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20295 98.648 133.0 755320.0 25 0 64994.0 -1 0 76 688.0735427739423 2748.265065229369 4 688.3251830935478 MULTI CID FTMS 0 0 0 20291 666006.0 0.1158513282513443 -2 0.3025131225585937 4 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 77.841 0.0 0.0 2.8324 0.0 0.0 0.0 1707.6510264932942 1707.6510264932942 43.26606256887672 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.5752574989159953 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.8324 - 1125 1 1.573 81979.4 1.0 14436 5857 20291 HBL1_DMSO_200M_050219_1,20295 HBL1_DMSO_200M_050219_1,20295, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20296 98.651 146.0 645510.0 25 0 35488.0 -1 0 95 799.6372437539173 3194.519869149269 4 799.8887817263603 MULTI CID FTMS 0 0 0 20291 647159.3125 1.0 0 0.0 5 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 66.648 0.0 0.0 2.0863 0.0 0.0 0.0 2153.907834517056 2153.907834517056 47.97614693140829 0.0 0.0 0.0 0 1.5 1.3979400086720375 0.3054621874040891 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.0863 - 362 1 1.573 71374.4 1.0 14437 5857 20291 HBL1_DMSO_200M_050219_1,20296 HBL1_DMSO_200M_050219_1,20296, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20297 98.655 217.0 475750.0 25 0 56409.0 + 17210 KLLEVQILEV 10 109 592.3682218216856 1182.721890710171 2 592.3688232302666 MULTI CID FTMS 0 0 0 20291 453199.90625 1.0 0 0.0 6 Unmodified _KLLEVQILEV_ ENSG00000135968|ENST00000309863|GCC2 93.16586880292088 0.0091067182461363 3 {I|L}{I|L}KEVQ{I|L}{I|L}EV 10 2 + 99.14 0.0 0.0 8.3824 8.3824 88.468 0.0 0.0 0.0 4.279032320494807 16.53212513775344 4.279032320494807 4.279032320494807 0 1.0629529932484498 1.0969100130080565 1.298455006504028 1.1861818737241734 {I|L}{I|L}KEVQ{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]VQ{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{I|L}K{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}N{I|L}{I|L}K{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KQ{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}V{I|L}KQ{I|L}{I|L}EV;{I|L}{I|L}K{I|L}DQ{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}Q{I|L}K{I|L}{I|L}EV;{I|L}{I|L}KEV[AG]{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}VQ{I|L}K{I|L}{I|L}EV 8.3824;8.0206;7.9522;7.9095;7.8137;7.7709;7.704;7.6384;7.6075;7.5957 -;-;-;-;-;-;-;-;-;- 1783 1 1.573 80750.8 1.0 14438 5857 20291 HBL1_DMSO_200M_050219_1,20297 HBL1_DMSO_200M_050219_1,20297,KLLEVQILEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20298 98.659 167.0 400420.0 25 0 31014.0 -1 QVLMKSQKGSL 11 101 617.8437168089148 1233.6728806846295 2 617.8443481326103 MULTI CID FTMS 0 0 0 20291 453729.25 0.8838596140291006 1 -0.098052978515625 7 Oxidation (M) _QVLM(Oxidation (M))KSQKGSL_ ENSG00000183840|ENST00000329321|GPR39 24.99096001346401 0.505407273373304 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV]{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 10 -1 + 35.613 0.0 0.0 2.8867 2.8867 77.138 0.0 0.0 0.0 8.102925428611904 7.269987279362617 7.269987279362617 8.102925428611904 0 0.5 1.0457574905606752 0.3494850021680094 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV]{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[VA]|[{I|L}G]}G{I|L}[RV]{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[KP]{I|L}{[VA]|[{I|L}G]}S{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}S{I|L};{[TV]|[{I|L}S]}[KG]{I|L}P{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV]{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[R{M(Oxidation (M))|F}]{I|L}S{I|L};[{I|L}P]K{[VA]|[{I|L}G]}S{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[VA]|[{I|L}G]}[KS]{I|L}P{I|L}S{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[VA]|[{I|L}G]}G{I|L}[RV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}S{I|L} 2.8867;2.2299;2.0412;1.9954;1.9543;1.8941;1.7514;1.5903;1.4969;1.3386 -;-;-;-;-;-;-;-;-;- 750 1 1.573 54092.7 1.0 14439 5857 20291 HBL1_DMSO_200M_050219_1,20298 HBL1_DMSO_200M_050219_1,20298,QVLMKSQKGSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20299 98.662 177.0 828960.0 25 0 46758.0 + 39084 TVYGGLMYI 9 91 1016.5119234357628 1015.5046469691628 1 1016.512988269329 MULTI CID FTMS 0 0 0 20291 408308.125 1.0 0 0.0 8 Unmodified _TVYGGLMYI_ ENSG00000198642|ENST00000359039|KLHL9 101.72198241140316 0.010086100337927 3 {[TV]|[{I|L}S]}YN{I|L}MY{I|L} 8 2 + 76.88 0.0 0.0 7.5706 7.5706 92.982 0.0 0.0 0.0 12.897962814248714 14.90463059526342 12.897962814248714 9.26213785839083 0 1.5283773187068794 1.5228787452803376 2.3494850021680094 0.0 {[TV]|[{I|L}S]}YN{I|L}MY{I|L};{[TV]|[{I|L}S]}YGG{I|L}MY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YS{I|L}MY{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}YMY{I|L};[YN]{I|L}S{I|L}MY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YVTMY{I|L};[YV]QS{I|L}MY{I|L};[YV]TN{I|L}MY{I|L};[YN]{I|L}VTMY{I|L};[YN]VT{I|L}MY{I|L} 7.5706;6.6586;6.3005;5.811;5.7077;5.3755;5.275;5.023;4.7827;4.768 -;+;-;-;-;-;-;-;-;- + 2681 1 1.573 99928.2 1.0 14440 5857 20291 HBL1_DMSO_200M_050219_1,20299 HBL1_DMSO_200M_050219_1,20299,TVYGGLMYI True True TVYGGLMYI 98.662101 1016.51298826933 3642225.5 20291.0 ENSG00000198642|ENST00000359039|KLHL9 6.170071283976237 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20300 98.665 121.0 643110.0 25 0 55002.0 + 20564 LLNEILEQV 9 95 535.8088256567783 0 535.8086425662041 PEAK CID FTMS 0 0 0 20291 342074.8125 0.3570496069072945 -2 0.3025131225585937 9 Unmodified _LLNEILEQV_ ENSG00000109805|ENST00000251496|NCAPG 52.268347100219714 0.0254642048063414 3 {I|L}{I|L}{I|L}Q 4 5 28.761 0.0 0.0 2.6889 0.0 0.0 374.1821521907064 225.0885714166625 599.270723607369 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.4604093769761874 {I|L}{I|L}{I|L}Q 2.6889 - 185 + 1 1.573 64273.3 1.0 14441 5857 20291 HBL1_DMSO_200M_050219_1,20300 HBL1_DMSO_200M_050219_1,20300,LLNEILEQV True True LLNEILEQV 98.664618 535.808642566204 6925642.5 20291.0 ENSG00000109805|ENST00000251496|NCAPG 2.312024394671122 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20301 98.667 112.0 862670.0 25 0 118350.0 + 15296 IPISNILMV 9 115 508.29634384823146 1014.5781347632628 2 508.2963439822197 MULTI CID FTMS 0 0 0 20291 266581.90625 0.1321407750426336 -4 0.4364471435546875 10 Oxidation (M) _IPISNILM(Oxidation (M))V_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 71.13359017698441 0.0206607516130725 3 [{I|L}P]S{I|L}N{I|L}{I|L}{M(Oxidation (M))|F}V 9 2 + 59.49 0.0 0.0 5.8635 5.8635 81.276 0.0 0.0 0.0 8.656360137956092 2.925515300088435 2.925515300088435 3.5340874929963846 0 1.492992819099939 1.5228787452803376 0.7742275032520141 0.6237125054200234 [{I|L}P]S{I|L}N{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]S{I|L}N{I|L}Y[VP];[{I|L}P]{I|L}SN{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]SN{I|L}{I|L}Y[VP];{[TV]|[{I|L}S]}P{I|L}N{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]{I|L}SN{I|L}Y[VP];{[TV]|[{I|L}S]}PN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}P{I|L}N{I|L}Y[VP];[{I|L}P]D[KA]{I|L}{I|L}{M(Oxidation (M))|F}V 5.8635;5.5152;5.3738;5.3218;5.0254;5.0103;4.832;4.662;4.5206;4.5121 -;-;-;+;-;-;-;-;-;- + 1281 1 1.573 80894.0 1.0 14442 5857 20291 HBL1_DMSO_200M_050219_1,20301 HBL1_DMSO_200M_050219_1,20301,IPISNILMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20302 98.673 341.0 302140.0 25 0 13010.0 -1 0 118 774.3750204443423 3093.470975910969 4 774.8773681521416 MULTI CID FTMS 0 0 0 20291 287070.1875 0.912933101167392 -2 0.3025131225585937 11 3 {[QN]|[E{I|L}]|[KN]}{I|L}HVAY{I|L}Q{I|L} 10 -1 85.865 0.0 0.0 2.7757 0.0 0.0 0.0 1910.8104485040544 1910.8104485040544 57.900990676322905 0.0 0.0 0.0 0 1.8252574989159955 1.5228787452803376 0.0 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}{I|L}HVAY{I|L}Q{I|L} 2.7757 - 768 + 1 1.573 78074.3 1.0 14443 5857 20291 HBL1_DMSO_200M_050219_1,20302 HBL1_DMSO_200M_050219_1,20302, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20303 98.681 418.0 245100.0 25 0 20419.0 + 19995 LILEPSLYTV 10 124 574.3340088392551 1146.6534647453102 2 574.3340942263603 MULTI CID FTMS 0 0 0 20291 279499.40625 0.9853863066267812 -1 0.1170654296875 12 Unmodified _LILEPSLYTV_ ENSG00000111481|ENST00000262061|COPZ1;ENST00000551412.5_1_12:54718935-54741629:+|nuORF;ENST00000553009.5_1_12:54718935-54736154:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1 81.61307344734483 0.0157458389277943 3 {[TV]|[{I|L}S]}PY{I|L}{I|L}T 7 6 42.555 0.0 0.0 3.7112 0.0 0.0 0.0 356.1852389975165 356.1852389975165 6.321705611529836 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.3661764699893073 0.0 {[TV]|[{I|L}S]}PY{I|L}{I|L}T 3.7112 - 1337 1 1.573 86376.0 1.0 14444 5857 20291 HBL1_DMSO_200M_050219_1,20303 HBL1_DMSO_200M_050219_1,20303,LILEPSLYTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20304 98.684 182.0 571660.0 25 0 112750.0 -1 VIEMCQLL 8 133 511.2557524984639 1020.4969520637278 2 511.2578002810478 MULTI CID FTMS 0 0 0 20291 297932.90625 1.0 0 0.0 13 Carbamidomethyl (C),Oxidation (M) _VIEM(Oxidation (M))C(Carbamidomethyl (C))QLL_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 19.438996006549623 0.6237395211498085 3 {I|L}D{I|L}{I|L}{I|L}R 6 -1 40.706 0.0 0.0 3.9889 0.0 0.0 279.03535659004064 0.0 279.03535659004064 0.0 14.675390846596486 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {I|L}D{I|L}{I|L}{I|L}R 3.9889 - 429 1 1.573 84626.5 1.0 14445 5857 20291 HBL1_DMSO_200M_050219_1,20304 HBL1_DMSO_200M_050219_1,20304,VIEMCQLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20305 98.69 327.0 486310.0 25 0 43382.0 + 21106 LPALLQQL 8 125 448.28384414161 894.55313535002 2 448.2840148806572 MULTI CID FTMS 0 0 0 20291 268979.28125 0.6782696110311146 -4 0.4364471435546875 14 Unmodified _LPALLQQL_ ENSG00000179262|ENST00000586534|RAD23A;nc|ENSG00000179262|P54725-2|RAD23A;nc|ENSG00000179262|P54725-3|RAD23A 45.7499826716795 0.1592378023510922 3 [{I|L}P]A{I|L}{I|L}QQ{I|L} 8 0 + 42.797 0.0 0.0 4.7842 4.7842 74.136 0.0 0.0 0.0 7.876965682898742 7.914478256039672 7.876965682898742 1.5186375580366729 0 0.5172203223519531 1.3010299956639813 0.0 0.0 + + [{I|L}P]A{I|L}{I|L}QQ{I|L};[{I|L}P]A{I|L}Q{I|L}Q{I|L};[PA]{I|L}{I|L}{I|L}QQ{I|L};[{I|L}P]A{I|L}{I|L}[AG]Q{I|L};[PA]{I|L}{I|L}Q{I|L}Q{I|L};[{I|L}P]A{I|L}[AG]{I|L}Q{I|L};{I|L}{I|L}AP{I|L}QQ{I|L};{I|L}{I|L}APQ{I|L}Q{I|L};[PA]{I|L}{I|L}{I|L}[AG]Q{I|L};[PA]{I|L}{I|L}[AG]{I|L}Q{I|L} 4.7842;4.6144;3.9036;3.7488;3.7338;3.2154;3.1664;2.9966;2.8682;2.3348 +;-;-;-;-;-;-;-;-;- + 250 1 1.573 126980.0 1.0 14446 5857 20291 HBL1_DMSO_200M_050219_1,20305 HBL1_DMSO_200M_050219_1,20305,LPALLQQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20306 98.694 216.0 320830.0 25 0 68467.0 + 27742 PLNCHALI 8 103 440.73961230959503 879.4646716859901 2 440.7398864626884 MULTI CID FTMS 0 0 0 20291 265382.375 1.0 0 0.0 15 Unmodified _PLNCHALI_ REV__AluSz_dup5931|chr1:160754930-160755224:+|1.3002925963017808|0.0348536374763343|5.22|48.0|19|3|anti-sense 15.768221252438446 0.6779680726941459 3 [{I|L}P]{I|L} 3 -1 19.041 0.0 0.0 2.1651 0.0 0.0 0.0 553.220750137415 553.220750137415 1.082268588648251 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}P]{I|L} 2.1651 - 261 1 1.573 57164.4 1.0 14447 5857 20291 HBL1_DMSO_200M_050219_1,20306 HBL1_DMSO_200M_050219_1,20306,PLNCHALI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20307 98.699 199.0 437110.0 25 0 36878.0 + 34209 SLPGELFHVV 10 114 549.3035147777397 0 549.3027831912041 PEAK CID FTMS 0 0 0 20291 170860.421875 0.7810841925028235 -2 0.3025131225585937 16 Unmodified _SLPGELFHVV_ ENSG00000164603|ENST00000297145|BMT2 48.345845343767074 0.0580028052695927 3 RVH{M(Oxidation (M))|F}{I|L}E 6 9 19.663 0.0 0.0 1.7931 0.0 0.0 161.06972379200425 151.05166040592033 312.1213841979246 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 RVH{M(Oxidation (M))|F}{I|L}E 1.7931 - 471 + 1 1.573 72817.2 1.0 14448 5857 20291 HBL1_DMSO_200M_050219_1,20307 HBL1_DMSO_200M_050219_1,20307,SLPGELFHVV True True SLPGELFHVV 98.699162 549.302783191204 4816955.0 20291.0 ENSG00000164603|ENST00000297145|BMT2 6.637897491455078 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20308 98.702 155.0 346570.0 25 0 36322.0 + 41983 VQMPVLDVKL 10 90 571.3361417951578 1140.6577306571155 2 571.3378784060478 MULTI CID FTMS 0 0 0 20291 146356.0625 1.0 0 0.0 17 Unmodified _VQMPVLDVKL_ nc|ENSG00000114125|Q9UBF6-3|RNF7 23.78978130925829 0.4341852049148378 3 {[QV]|[N{I|L}]|[RA]|[KV]}M[VP]{NN|[MP]|[D{I|L}]|[EV]}VK{I|L} 10 0 + 31.686 0.0 0.0 2.7779 2.7779 75.909 0.0 0.0 0.0 1.892653074926045 1.1176468817137677 1.1176468817137677 6.7744001702735765 0 0.8252574989159953 0.8239087409443188 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}M[VP]{NN|[MP]|[D{I|L}]|[EV]}VK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YV][RH]VK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YV]K[YT]K{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YV]K[KT]Y{I|L} 2.7779;2.184;1.92;1.7657 +;-;-;- + 201 + 1 1.573 47093.2 1.0 14449 5857 20291 HBL1_DMSO_200M_050219_1,20308 HBL1_DMSO_200M_050219_1,20308,VQMPVLDVKL False True VQMPVLDVKL 98.702239 571.337878406048 2487742.25 20291.0 nc|ENSG00000114125|Q9UBF6-3|RNF7 6.232137680053711 2.0 True 10.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 20309 98.716 800.0 150420.0 25 0 7417.8 -1 0 119 1065.846798470954 3194.518566013063 3 1066.181689441204 MULTI CID FTMS 0 0 0 20291 138791.765625 1.0 0 0.0 18 3 [H{I|L}]VEA{I|L}Y 7 -1 54.429 0.0 0.0 1.7038 0.0 0.0 0.0 2366.055589288706 2366.055589288706 28.511744483784085 0.0 0.0 0.0 0 1.5 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y 1.7038 - 498 1 1.573 80902.4 0.6299999952316284 14450 5857 20291 HBL1_DMSO_200M_050219_1,20309 HBL1_DMSO_200M_050219_1,20309, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20310 98.721 287.0 400790.0 25 0 49717.0 + 3024 AVLDLSWNKL 10 132 579.8287046478856 1157.6428563625711 2 579.8307372927666 MULTI CID FTMS 0 0 0 20291 118073.6953125 0.1804180914588108 -2 0.3025131225585937 19 Unmodified _AVLDLSWNKL_ ENSG00000136045|ENST00000412830|PWP1 134.295615338601 0.0002091370085671 3 {[VA]|[{I|L}G]}{I|L}D{I|L}SWNK{I|L} 10 0 + 116.83 0.0 0.0 10.092 10.092 94.367 0.0 0.0 0.0 61.82110780144964 9.832881222565248 9.832881222565248 9.164539485499247 0 1.524227503252014 2.0 1.0189301784845295 2.280369551124698 + + {[VA]|[{I|L}G]}{I|L}D{I|L}SWNK{I|L};{[VA]|[{I|L}G]}{I|L}D{I|L}SWGGK{I|L};{[VA]|[{I|L}G]}{I|L}D{I|L}SW[KQ]V;{[VA]|[{I|L}G]}{I|L}[WE]WNK{I|L};{[VA]|[{I|L}G]}{I|L}[WE]WGGK{I|L};{[VA]|[{I|L}G]}{I|L}[WE]W[KQ]V;{[VA]|[{I|L}G]}{I|L}DCK{I|L}N{I|L}G{I|L};{[VA]|[{I|L}G]}{I|L}DC{I|L}KN{I|L}G{I|L};{[VA]|[{I|L}G]}{I|L}D{I|L}CKN{I|L}G{I|L};{[VA]|[{I|L}G]}{I|L}DC{I|L}NK{I|L}G{I|L} 10.092;9.3003;8.9004;6.613;5.8176;5.4214;5.2409;4.9573;4.9573;4.7657 +;-;-;-;-;-;-;-;-;- + 4185 + 1 1.573 92247.9 1.0 14451 5857 20291 HBL1_DMSO_200M_050219_1,20310 HBL1_DMSO_200M_050219_1,20310,AVLDLSWNKL True True AVLDLSWNKL 98.721387 579.830737292767 8217964.5 20291.0 ENSG00000136045|ENST00000412830|PWP1 6.580925623575847 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20311 98.735 800.0 141860.0 25 0 12788.0 + + 866 DPFYWMRVI 9 156 621.3575688797795 1240.7005848263589 2 621.3537475466728 MULTI CID FTMS 0 0 0 20291 96913.8359375 1.0 0 0.0 20 Unmodified _AEVDVNQKLLL_ ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-3|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1 17.44264345198275 0.6723198055858692 3 {[DA]|[EG]}{I|L}{I|L}{I|L}A[DV]W{I|L}{I|L} 11 -1 + 44.218 0.0 0.0 3.5639 3.5639 74.059 0.0 0.0 0.0 14.82779677648046 1.5538824784291805 1.5538824784291805 3.5654732351381213 0 0.9559771852360796 1.2218487496163564 0.0 0.0 {[DA]|[EG]}{I|L}{I|L}{I|L}A[DV]W{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}{[RE]|[WV]}W{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}D{[VA]|[{I|L}G]}W{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}A{I|L}[DV]W{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}M[PG]W{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}A[DV]{[DA]|[EG]}{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}{[VA]|[{I|L}G]}W{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}{[RE]|[WV]}{[DA]|[EG]}{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}D{[VA]|[{I|L}G]}{[DA]|[EG]}{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}A[MT][PA]{I|L}{I|L} 3.5639;3.2766;3.1254;3.0374;3.0006;2.8282;2.6648;2.5379;2.3897;2.3872 -;-;-;-;-;-;-;-;-;- 4202 1 1.573 86106.4 0.4699999988079071 14452 5857 20291 HBL1_DMSO_200M_050219_1,20311 HBL1_DMSO_200M_050219_1,20311,AEVDVNQKLLL False False DPFYWMRVI 98.735224 621.353747546673 323719.34375 20291.0 ENSG00000065665|ENST00000298428|SEC61A2;;nc|ENSG00000065665|Q9H9S3-3|SEC61A2;;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;;ENSG00000058262|ENST00000243253|SEC61A1 6.60501782099406 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20313 98.745 360.0 215760.0 25 0 20699.0 + 11699 GLGGRFLFASV 11 107 562.3165648437221 1122.618576754244 2 562.3171874880791 MULTI CID FTMS 0 0 0 20312 133966.234375 0.3668743549411296 2 -0.1902236938476562 1 Unmodified _GLGGRFLFASV_ ENSG00000134243|ENST00000256637|SORT1;nc|ENSG00000134243|Q99523-2|SORT1 61.60191391372663 0.0626439052904852 3 {[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}ASV 10 2 + 73.531 0.0 0.0 6.55 6.55 84.923 0.0 0.0 0.0 18.0931854819806 45.45935157789816 18.0931854819806 4.771212547196626 0 1.774227503252014 2.0 0.3807196863200844 0.0 {[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}ASV;{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ASV;{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}SAV;{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}A{I|L}SV;{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}SAV;{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}SV;{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}TVAV;{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}TG{I|L}V;{[VA]|[{I|L}G]}S[HK][WP]{I|L}SV;{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}AS{I|L}V 6.55;6.125;5.5683;5.2546;5.1433;5.1433;4.4513;4.365;4.3341;4.1866 -;-;-;-;-;-;-;-;-;- 1057 1 1.573 65923.4 1.0 14453 5858 20312 HBL1_DMSO_200M_050219_1,20313 HBL1_DMSO_200M_050219_1,20313,GLGGRFLFASV True True GLGGRFLFASV 98.744991 562.317187488079 3086106.75 20312.0 nc|ENSG00000134243|Q99523-2|SORT1;;ENSG00000134243|ENST00000256637|SORT1 7.581726710001628 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20314 98.747 74.0 1085200.0 25 0 202800.0 + 34728 SPYPWPLNHI 10 71 612.3142295699773 1222.6139062067546 2 612.3143798708916 MULTI CID FTMS 0 0 0 20312 564146.875 0.8674156685751121 -3 0.4005661010742187 2 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 68.08070601005525 0.0189984391031388 3 [PS]YPW{I|L}PV[HQ] 10 4 + 71.309 0.0 0.0 5.8325 5.8325 82.648 0.0 0.0 0.0 19.488474775526186 4.771212547196626 4.771212547196626 4.771212547196626 0 0.9247425010840048 1.5228787452803376 0.0 1.3979400086720375 [PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PN[H{I|L}];[PS]Y{I|L}[WP]PV[HQ];[PS]YPW{I|L}PGG[H{I|L}];[PS]Y{I|L}[WP]PN[H{I|L}];[PS]Y{I|L}[WP]PGG[H{I|L}] 5.8325;5.4423;3.8293;3.5493;3.4391;2.1178 -;-;-;-;-;- 262 + 1 1.573 63963.5 1.0 14454 5858 20312 HBL1_DMSO_200M_050219_1,20314 HBL1_DMSO_200M_050219_1,20314,SPYPWPLNHI True True SPYPWPLNHI 98.746728 612.314379870892 61684986.0 20312.0 nc|ENSG00000128654|O75431-2|MTX2;;ENSG00000128654|ENST00000249442|MTX2;;ENST00000420864.5_1_2:177135134-177202389:+|nuORF 7.392654101053874 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20315 98.749 84.0 987140.0 25 0 126490.0 + 20618 LLPPPIAPL 9 99 465.8046970508198 929.5948411684396 2 465.8051940798759 MULTI CID FTMS 0 0 0 20312 502936.34375 0.1699493665036737 7 -0.770263671875 3 Unmodified _LLPPPIAPL_ ENSG00000136378|ENST00000388820|ADAMTS7 56.04830969593885 0.0282699710924866 3 {I|L}{I|L}PPP{I|L}PA{I|L} 9 2 + 59.563 0.0 0.0 6.4074 6.4074 91.885 0.0 0.0 0.0 35.406075122407685 7.215001545097202 7.215001545097202 19.69273760456403 0 1.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}PPP{I|L}PA{I|L};{I|L}{I|L}[YK]{I|L}PA{I|L};{I|L}{I|L}PPPVVPV;{I|L}{I|L}[YK]VVPV 6.4074;4.289;3.5304;1.412 -;-;-;- 386 + 1 1.573 67618.1 1.0 14455 5858 20312 HBL1_DMSO_200M_050219_1,20315 HBL1_DMSO_200M_050219_1,20315,LLPPPIAPL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20316 98.751 106.0 696870.0 25 0 116350.0 + 6541 EALHYMLLV 9 93 544.7941271080545 1087.5737012829088 2 544.7942382693291 MULTI CID FTMS 0 0 0 20312 371956.625 0.6416427019887313 -1 0.098052978515625 4 Unmodified _EALHYMLLV_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF 44.40701690623563 0.0526327925666318 3 [H{I|L}]{[CP]|[EA]}YM{I|L}{I|L}V 9 4 + 57.337 0.0 0.0 5.272 5.272 86.49 0.0 0.0 0.0 6.75846205488881 36.90369011897481 6.75846205488881 10.791812460476253 0 0.8182503180159344 1.3010299956639813 1.6989700043360187 0.0 [H{I|L}]{[CP]|[EA]}YM{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}[HA]YM{I|L}{I|L}V;[H{I|L}]Y{[CP]|[EA]}M{I|L}{I|L}V;[VP]E[C(Carbamidomethyl (C))K]M{I|L}{I|L}V;{[WN]|[YH]}{I|L}{[CP]|[EA]}M{I|L}{I|L}V;{[TV]|[{I|L}S]}[MT]Y[YV]{I|L}V;{[QN]|[E{I|L}]|[KN]}[Y{I|L}][NP]Q{I|L}V;[TA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[YV]{I|L}V 5.272;4.2797;3.962;3.1737;2.8548;2.6078;0.96758;0.58838 -;-;-;-;-;-;-;- 244 1 1.573 63081.0 1.0 14456 5858 20312 HBL1_DMSO_200M_050219_1,20316 HBL1_DMSO_200M_050219_1,20316,EALHYMLLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20317 98.756 259.0 351330.0 25 0 24832.0 21105 LPALKFCC 8 90 447.73380349493226 893.4530540566645 2 447.7340576052666 MULTI CID FTMS 0 0 0 20312 207585.390625 0.8735300913186707 1 -0.0772171020507812 5 Unmodified _LPALKFCC_ ENST00000393743.7_1_4:169193222-169193273:-|nuORF 15.768221252438446 0.6779680726941459 3 {I|L}{I|L}D 3 6 23.984 0.0 0.0 2.6845 0.0 0.0 0.0 549.2389620416624 549.2389620416624 0.1620343313499646 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}{I|L}D 2.6845 - 128 + 1 1.573 77596.0 1.0 14457 5858 20312 HBL1_DMSO_200M_050219_1,20317 HBL1_DMSO_200M_050219_1,20317,LPALKFCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20318 98.76 257.0 351830.0 25 0 65016.0 + 3963 DALPLLKI 8 83 441.78650245405794 881.5584519749159 2 441.7865783572197 MULTI CID FTMS 0 0 0 20312 192975.265625 0.5253180725433383 3 -0.2970657348632812 6 Unmodified _DALPLLKI_ ENSG00000152213|ENST00000282026|ARL11 28.486842064014134 0.4448922141344407 3 {[DA]|[EG]}{I|L} 3 5 27.051 0.0 0.0 3.0686 0.0 0.0 0.0 579.3871622622784 579.3871622622784 -0.1156189942356888 0.0 -0.1156189942356888 0.0 0 0.5 1.3979400086720375 0.0 0.0 + {[DA]|[EG]}{I|L} 3.0686 + + 97 1 1.573 79866.6 1.0 14458 5858 20312 HBL1_DMSO_200M_050219_1,20318 HBL1_DMSO_200M_050219_1,20318,DALPLLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20319 98.765 263.0 577240.0 25 0 97680.0 + 35874 SVLNVLHSL 9 127 491.2899217556439 980.5652905780878 2 491.2899352908134 MULTI CID FTMS 0 0 0 20312 163161.03125 0.0408421298700681 -3 0.4005661010742187 7 Unmodified _SVLNVLHSL_ ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L 85.27202061508552 0.0162393975915471 3 [VS]{I|L}NV{I|L}HS{I|L} 9 0 + 83.387 0.0 0.0 8.504 8.504 94.699 0.0 0.0 0.0 27.147642715192504 9.542425094393252 9.542425094393252 9.542425094393252 0 0.7742275032520141 2.0 1.579689690656103 0.3807196863200844 + + [VS]{I|L}NV{I|L}HS{I|L};[VS]{I|L}NV{I|L}HTV;[VS]{I|L}GGV{I|L}HS{I|L};[VS]{I|L}GGV{I|L}HTV;{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VN{I|L}[PA];[VS]{I|L}HN{I|L}{I|L}[VS];{[QV]|[N{I|L}]|[RA]|[KV]}VAAVN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}QN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VGG{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{I|L}VN{I|L}[PA] 8.504;7.5308;7.1767;6.2035;5.3282;5.2797;4.5346;4.4663;4.3891;4.3891 +;-;-;-;-;-;-;-;-;- + 1829 + 1 1.573 116902.3 1.0 14459 5858 20312 HBL1_DMSO_200M_050219_1,20319 HBL1_DMSO_200M_050219_1,20319,SVLNVLHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20320 98.771 312.0 255910.0 25 0 26302.0 + + -1 TVVPDEDFVLV 11 101 616.323641405626 1230.6327298780518 2 616.8259155154228 MULTI CID FTMS 0 0 0 20312 162700.265625 0.5035036014220008 -3 0.4005661010742187 8 Oxidation (M) _VQWIPM(Oxidation (M))IETV_ ENSG00000176170|ENST00000592299|SPHK1;nc|ENSG00000176170|Q9NYA1-2|SPHK1;nc|ENSG00000176170|Q9NYA1-3|SPHK1 15.847184025352805 0.5816416552707754 3 [KT]VVTV{M(Oxidation (M))|F}DE 9 -1 51.195 0.0 0.0 4.16 0.0 0.0 0.0 209.0573671930297 209.0573671930297 23.7472939463698 0.0 0.0 0.0 0 0.0 0.0 1.9361818737241727 0.0 [KT]VVTV{M(Oxidation (M))|F}DE 4.16 - 395 + 1 1.573 66475.3 1.0 14460 5858 20312 HBL1_DMSO_200M_050219_1,20320 HBL1_DMSO_200M_050219_1,20320,VQWIPMIETV False False TVVPDEDFVLV 98.771009 616.825915515423 7471327.5 20312.0 ENSG00000176170|ENST00000592299|SPHK1;;nc|ENSG00000176170|Q9NYA1-2|SPHK1;;nc|ENSG00000176170|Q9NYA1-3|SPHK1 5.1122721036275225 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20321 98.785 800.0 201360.0 25 0 8982.1 -1 0 135 1187.059404254595 0 1187.062426745892 PEAK CID FTMS 0 0 0 20312 115834.8984375 0.5677338131231889 14 -1.23114013671875 9 3 A{[HG]|PP}PPHTA{I|L} 9 -1 33.638 0.0 0.0 1.4181 0.0 0.0 1264.531032995785 223.07322107486564 1487.6042540706503 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 A{[HG]|PP}PPHTA{I|L} 1.4181 - 3612 + 1 1.573 99980.2 0.6200000047683716 14461 5858 20312 HBL1_DMSO_200M_050219_1,20321 HBL1_DMSO_200M_050219_1,20321, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20322 98.799 800.0 59080.0 25 0 1683.1 -1 0 85 1077.047778308392 0 1077.047778308392 PEAK CID FTMS 0 0 0 -1 0 10 3 P 1 -1 4.6041 0.0 0.0 0.21394 0.0 0.0 1455.9052357165904 596.1148775690061 2052.0201132855964 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.21394 - 41 + 1 1.573 35766.6 0.6399999856948853 14462 5858 20312 HBL1_DMSO_200M_050219_1,20322 HBL1_DMSO_200M_050219_1,20322, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20323 98.813 800.0 136710.0 25 0 7998.7 -1 0 115 644.822074177621 2575.259190844084 4 645.0734741091728 MULTI CID FTMS 0 0 0 20312 94163.8203125 1.0 0 0.0 11 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 55.812 0.0 0.0 2.1672 0.0 0.0 0.0 1633.7139950238711 1633.7139950238711 36.39969987625378 0.0 0.0 0.0 0 1.5 1.2218487496163564 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 2.1672 - 1041 1 1.573 90005.1 0.4900000095367431 14463 5858 20312 HBL1_DMSO_200M_050219_1,20323 HBL1_DMSO_200M_050219_1,20323, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20325 98.817 28.0 3050000.0 25 0 447900.0 + 4025 DALRSILTI 9 97 501.3030275794831 1000.591502225766 2 501.3032409548759 MULTI CID FTMS 0 0 0 20324 2059252.75 0.0150534186028586 12 -1.1120376586914062 1 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 59.36838082759317 0.0264317782606298 3 [{I|L}T]R[DG]{I|L}{I|L}T{I|L} 9 4 + 73.592 0.0 0.0 7.3549 7.3549 83.258 0.0 0.0 0.0 2.0732594320775632 16.020599913279625 2.0732594320775632 2.0732594320775632 0 0.9247425010840048 1.6989700043360187 1.325257498915995 0.0 [{I|L}T]R[DG]{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}GRS{I|L}{I|L}T{I|L};{[DA]|[EG]}{I|L}RS{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}D{I|L}T{I|L};[{I|L}T]R{[VA]|[{I|L}G]}D{I|L}T{I|L};[{I|L}T]VG{[RE]|[WV]}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}K[DG]{I|L}{I|L}T{I|L};[{I|L}T]V{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}T{I|L};[{I|L}A]DRS{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}K{[VA]|[{I|L}G]}D{I|L}T{I|L} 7.3549;7.1477;7.1262;6.8781;6.8781;6.7532;6.6282;6.5772;6.4443;6.1514 -;-;+;-;-;-;-;-;-;- + 1118 1 1.573 69573.7 1.0 14464 5859 20324 HBL1_DMSO_200M_050219_1,20325 HBL1_DMSO_200M_050219_1,20325,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20326 98.818 46.0 1530600.0 25 0 291590.0 + 34069 SLLENLEKI 9 75 529.8088423717481 1057.6031318102962 2 529.8085815310478 MULTI CID FTMS 0 0 0 20324 1050344.75 0.3805402513857082 2 -0.2198486328125 2 Unmodified _SLLENLEKI_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000553444.1_1_14:21679384-21680083:-|nuORF;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 49.55428908609986 0.0413471690215031 3 {[TV]|[{I|L}S]}{I|L}EN{I|L}EK{I|L} 9 0 + 76.934 0.0 0.0 7.2743 7.2743 91.512 0.0 0.0 0.0 18.51342204748164 11.706962271689749 11.706962271689749 9.208187539523747 0 0.8494850021680094 2.0 0.805462187404089 0.2302046884880938 + + {[TV]|[{I|L}S]}{I|L}EN{I|L}EK{I|L};{[TV]|[{I|L}S]}{I|L}EGG{I|L}EK{I|L};{[TV]|[{I|L}S]}{I|L}[KS]SEV[VP];{[TV]|[{I|L}S]}{I|L}[R{M(Oxidation (M))|F}]AGV[VP];{[TV]|[{I|L}S]}{I|L}[R{M(Oxidation (M))|F}]QV[VP] 7.2743;6.4037;3.584;3.3963;3.2298 +;-;-;-;- + 445 + 1 1.573 58484.3 1.0 14465 5859 20324 HBL1_DMSO_200M_050219_1,20326 HBL1_DMSO_200M_050219_1,20326,SLLENLEKI True True SLLENLEKI 98.818384 529.808581531048 55847562.0 20324.0 nc|ENSG00000092199|P07910-3|HNRNPC;;nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;ENSG00000179172|ENST00000317869|HNRNPCL1;;ENSG00000277058|ENST00000617807|HNRNPCL3;;ENSG00000275774|ENST00000621994|HNRNPCL2;;ENST00000553444.1_1_14:21679384-21680083:-|nuORF;;nc|ENSG00000092199|P07910|HNRNPC;;ENSG00000179412|ENST00000323770|HNRNPCL4 4.607950846354167 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20327 98.82 49.0 1550100.0 25 0 181480.0 + 20039 LIPDIDLKL 9 81 520.322988589831 1038.6314242464618 2 520.3244506716728 MULTI CID FTMS 0 0 0 20324 1076494.375 0.3838868235820429 6 -0.6930465698242188 3 Unmodified _LIPDIDLKL_ ENSG00000173473|ENST00000254480|SMARCC1 31.26834338654808 0.1333407332142048 3 {I|L}{I|L}PD{I|L}D{I|L}K{I|L} 9 0 + 60.773 0.0 0.0 5.8512 5.8512 90.075 0.0 0.0 0.0 14.811571214352774 13.46787486224656 13.46787486224656 19.26213785839081 0 0.7742275032520141 2.0 0.0 0.0 + + {I|L}{I|L}PD{I|L}D{I|L}K{I|L};{I|L}{I|L}PD{I|L}[RV]T{I|L} 5.8512;3.9967 +;- + 204 + 1 1.573 64243.1 1.0 14466 5859 20324 HBL1_DMSO_200M_050219_1,20327 HBL1_DMSO_200M_050219_1,20327,LIPDIDLKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20328 98.823 142.0 469140.0 25 0 31859.0 + 44557 YPETLGRLLI 10 76 587.8451913206685 1173.675829708137 2 587.8456298708916 MULTI CID FTMS 0 0 0 20324 465879.78125 0.4039400221877522 3 -0.3487548828125 4 Unmodified _YPETLGRLLI_ ENSG00000103184|ENST00000251170|SEC14L5;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 53.40400417844725 0.0601721406801337 3 YPET{I|L} 5 5 71.058 0.0 0.0 6.0543 0.0 0.0 0.0 567.363999469705 567.363999469705 41.12395659563255 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.805462187404089 0.0 + YPET{I|L} 6.0543 + + 63 + 1 1.573 56100.0 1.0 14467 5859 20324 HBL1_DMSO_200M_050219_1,20328 HBL1_DMSO_200M_050219_1,20328,YPETLGRLLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20329 98.825 147.0 435230.0 25 0 36636.0 + 37580 TLISELVQA 9 104 487.28174389036025 972.5489348475204 2 487.2814819216728 MULTI CID FTMS 0 0 0 20324 373008.0625 0.5277424905759148 2 -0.2198486328125 5 Unmodified _TLISELVQA_ ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7 57.47134341890925 0.0274820932774257 3 [{I|L}T]DVP{I|L} 6 6 52.189 0.0 0.0 5.3662 0.0 0.0 0.0 331.1615710640113 331.1615710640113 38.95262902650862 0.0 0.0 0.0 0 0.0 2.0 1.2803695511246984 0.0 [{I|L}T]DVP{I|L} 5.3662 - 520 1 1.573 52969.8 1.0 14468 5859 20324 HBL1_DMSO_200M_050219_1,20329 HBL1_DMSO_200M_050219_1,20329,TLISELVQA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20330 98.828 116.0 643650.0 25 0 132250.0 5108 DIAWFQILL 9 85 559.8135474975962 1117.6125420619924 2 559.8127929568291 MULTI CID FTMS 0 0 0 20324 258620.25 0.1993318743012658 -2 0.1752700805664062 6 Unmodified _DIAWFQILL_ nc|ENSG00000135903|P23760-8|PAX3 24.020572477871973 0.2255576514309169 3 [Y{M(Oxidation (M))|F}][HV]VD{I|L}{I|L}{I|L} 9 6 + 45.111 0.0 0.0 4.0364 4.0364 85.379 0.0 0.0 0.0 0.915149811213496 28.913187455970544 0.915149811213496 45.11107503885448 0 0.9247425010840048 0.0 0.0 0.0 [Y{M(Oxidation (M))|F}][HV]VD{I|L}{I|L}{I|L} 4.0364 - 106 1 1.573 61059.5 1.0 14469 5859 20324 HBL1_DMSO_200M_050219_1,20330 HBL1_DMSO_200M_050219_1,20330,DIAWFQILL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 20331 98.835 370.0 173200.0 25 0 11734.0 -1 0 93 751.034994231017 2250.0831532932507 3 751.3698608279228 MULTI CID FTMS 0 0 0 20324 202806.75 0.800870443747869 -1 0.0772171020507812 7 3 {[TV]|[{I|L}S]}N[{I|L}P]C(Carbamidomethyl (C))G{I|L}{I|L}{I|L}N 11 -1 42.683 0.0 0.0 1.8969 0.0 0.0 0.0 1052.4152815493633 1052.4152815493633 34.09942966366426 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.2742275032520141 {[TV]|[{I|L}S]}N[{I|L}P]C(Carbamidomethyl (C))G{I|L}{I|L}{I|L}N 1.8969 - 451 1 1.573 56911.2 1.0 14470 5859 20324 HBL1_DMSO_200M_050219_1,20331 HBL1_DMSO_200M_050219_1,20331, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20332 98.844 554.0 176840.0 25 0 8723.0 -1 0 108 760.3801125274664 3037.4913442434654 4 760.6320068240166 MULTI CID FTMS 0 0 0 20324 188398.65625 1.0 0 0.0 8 3 [DP]VA{I|L}[HS]S{I|L}AS{I|L}[C(Carbamidomethyl (C))D]V 15 -1 64.121 0.0 0.0 2.111 0.0 0.0 0.0 1469.755113266295 1469.755113266295 46.67403451429223 0.0 0.0 0.0 0 1.5 0.0 0.7059771852360797 0.0 [DP]VA{I|L}[HS]S{I|L}AS{I|L}[C(Carbamidomethyl (C))D]V 2.111 - 2376 1 1.573 76833.9 1.0 14471 5859 20324 HBL1_DMSO_200M_050219_1,20332 HBL1_DMSO_200M_050219_1,20332, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20333 98.852 450.0 124980.0 25 0 9141.8 -1 0 99 951.9673594349216 1901.9201659366431 2 952.4709350466728 MULTI CID FTMS 0 0 0 20324 180404.125 0.8281335174098008 -1 0.0772171020507812 9 3 [NP]N{I|L}{I|L}T 6 -1 27.695 0.0 0.0 1.4561 0.0 0.0 0.0 1246.5435539583807 1246.5435539583807 14.560997120194791 0.0 0.0 0.0 0 0.0 0.0 0.0 1.055462187404089 [NP]N{I|L}{I|L}T 1.4561 - 323 1 1.573 47924.4 1.0 14472 5859 20324 HBL1_DMSO_200M_050219_1,20333 HBL1_DMSO_200M_050219_1,20333, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20334 98.86 414.0 242050.0 25 0 31218.0 + 33481 SIIEAHCDNVT 11 130 601.2770477783645 1200.5395426235289 2 601.2767211794853 MULTI CID FTMS 0 0 0 20324 175557.546875 0.0703355133700841 11 -1.0007781982421875 10 Unmodified _SIIEAHCDNVT_ REV__ENSG00000160710|ENST00000368474|ADAR;REV__nc|ENSG00000160710|P55265-2|ADAR;REV__nc|ENSG00000160710|P55265-3|ADAR;REV__nc|ENSG00000160710|P55265-4|ADAR;REV__nc|ENSG00000160710|P55265-5|ADAR 26.268140514670165 0.4754186812857754 3 {[TV]|[{I|L}S]}{I|L}E 4 -1 37.551 0.0 0.0 3.1279 0.0 0.0 0.0 755.2724277155788 755.2724277155788 8.87900724135558 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.7769763493273799 0.0 {[TV]|[{I|L}S]}{I|L}E 3.1279 + + 414 1 1.573 74599.5 1.0 14473 5859 20324 HBL1_DMSO_200M_050219_1,20334 HBL1_DMSO_200M_050219_1,20334,SIIEAHCDNVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20335 98.871 642.0 203460.0 25 0 13879.0 + 17112 KLFPGFEIETV 11 140 640.3503518914645 1278.6861508497288 2 640.3513061404228 MULTI CID FTMS 0 0 0 20324 151847.125 0.4755531105855143 -2 0.1752700805664062 11 Unmodified _KLFPGFEIETV_ ENSG00000070669|ENST00000394308|ASNS;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS 80.6760300276096 0.0071538679453211 3 {[QN]|[E{I|L}]|[KN]}GM{I|L}{M(Oxidation (M))|F}K{I|L}ETV 11 5 + 94.536 0.0 0.0 7.3932 7.3932 84.843 0.0 0.0 0.0 3.3860275051067106 16.57577319177794 3.3860275051067106 3.0102999566398125 0 1.0 1.154901959985743 2.559894379144197 0.0 {[QN]|[E{I|L}]|[KN]}GM{I|L}{M(Oxidation (M))|F}K{I|L}ETV;{[QN]|[E{I|L}]|[KN]}GM{M(Oxidation (M))|F}{I|L}K{I|L}ETV;[PG]{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}K{I|L}ETV;[PG]{M(Oxidation (M))|F}E{M(Oxidation (M))|F}{I|L}K{I|L}ETV;{[QN]|[E{I|L}]|[KN]}GP{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;{NN|[MP]|[D{I|L}]|[EV]}AM{I|L}{M(Oxidation (M))|F}K{I|L}ETV;{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F}P{M(Oxidation (M))|F}K{I|L}ETV;[DP]{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;{NN|[MP]|[D{I|L}]|[EV]}PA{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;{NN|[MP]|[D{I|L}]|[EV]}AM{M(Oxidation (M))|F}{I|L}K{I|L}ETV 7.3932;7.1578;7.1284;6.893;6.8486;6.8471;6.7812;6.73;6.6158;6.6116 -;-;-;-;-;-;-;-;-;- 12414 1 1.573 103753.7 1.0 14474 5859 20324 HBL1_DMSO_200M_050219_1,20335 HBL1_DMSO_200M_050219_1,20335,KLFPGFEIETV True True KLFPGFEIETV 98.870909 640.351306140423 6683592.0 20324.0 nc|ENSG00000070669|P08243-2|ASNS;;nc|ENSG00000070669|P08243-3|ASNS;;ENSG00000070669|ENST00000394308|ASNS 6.9527161916097 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20336 98.876 304.0 234640.0 25 0 16197.0 + + 23357 GVVTDLITVGLK 12 95 607.8720609466333 1213.7295689600664 2 607.8723632693291 MULTI CID FTMS 0 0 0 20324 123527.640625 1.0 0 0.0 12 Unmodified _LTDILAAEKKL_ nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758|PTBP3 20.41453444215458 0.6105011870913812 3 [VG]VTD{I|L}{I|L}TVGK{I|L} 12 -1 + 92.683 0.0 0.0 7.6362 7.6362 83.525 0.0 0.0 0.0 10.871501757189009 1.812412373755876 1.812412373755876 1.812412373755876 0 1.274227503252014 2.0 0.0 0.0 [VG]VTD{I|L}{I|L}TVGK{I|L};[VG]VTD{I|L}{I|L}TVG{I|L}K 7.6362;7.4869 -;- 362 + 1 1.573 58053.8 1.0 14475 5859 20324 HBL1_DMSO_200M_050219_1,20336 HBL1_DMSO_200M_050219_1,20336,LTDILAAEKKL False False GVVTDLITVGLK 98.876469 607.872363269329 2428283.5 20324.0 nc|ENSG00000119314|O95758-5|PTBP3;;nc|ENSG00000119314|O95758|PTBP3 8.432498931884766 2.0 False 12.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 20337 98.888 569.0 186800.0 25 0 29116.0 + 2736 ATIGDLIHL 9 145 476.7769568374077 951.5393607416156 2 476.7767516970634 MULTI CID FTMS 0 0 0 20324 120418.3671875 0.0940614633348548 4 -0.4196319580078125 13 Unmodified _ATIGDLIHL_ ENSG00000165501|ENST00000298288|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF 38.15118350030904 0.0856056900103839 3 [TA]{I|L}[DG]{I|L}{I|L}H{I|L} 9 0 + 46.731 0.0 0.0 4.9111 4.9111 87.628 0.0 0.0 0.0 23.7583419041724 8.650092096759131 8.650092096759131 30.76706626919769 0 0.3807196863200844 2.0 0.3494850021680094 0.0 + + [TA]{I|L}[DG]{I|L}{I|L}H{I|L};[VP][KG]{I|L}[DG]{I|L}[PG];[VP]{I|L}[KG][DG]{I|L}[PG];[{I|L}P][KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[PG];[{I|L}P]V[KG][DG]{I|L}[PG];[KA]EE{I|L}{I|L}H{I|L} 4.9111;1.6777;1.045;1.0309;0.7074;0.62648 +;-;-;-;-;- + 475 + 1 1.573 85214.4 1.0 14476 5859 20324 HBL1_DMSO_200M_050219_1,20337 HBL1_DMSO_200M_050219_1,20337,ATIGDLIHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20338 98.901 800.0 236930.0 25 0 24344.0 + -1 HFGGGGFLAF 10 180 505.2479878414293 1008.4814227496586 2 505.2476684451103 MULTI CID FTMS 0 0 0 20324 106496.828125 0.8364670487088435 -2 0.1752700805664062 14 Oxidation (M) _FIFFM(Oxidation (M))AAF_ nc|ENSG00000154328|Q969S2-4|NEIL2;ENSG00000154328|ENST00000284503|NEIL2;nc|ENSG00000154328|Q969S2-2|NEIL2;ENST00000524741.1_1_8:11640652-11643779:+|nuORF;nc|ENSG00000154328|Q969S2-3|NEIL2 32.45364647766026 0.3613649037604678 3 {[MS]|[{M(Oxidation (M))|F}A]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F} 8 -1 + 40.283 0.0 0.0 3.9944 3.9944 69.554 0.0 0.0 0.0 0.2680249241196719 0.2680249241196719 0.2680249241196719 0.2680249241196719 0 0.8494850021680094 0.0 0.6382104921644451 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F};[HV]{I|L}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E]A{M(Oxidation (M))|F};[WP][DN]{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F};[HV][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F};[KP]DDG{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}[NG]G{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F};[{I|L}P]SA{M(Oxidation (M))|F}WAA{M(Oxidation (M))|F};{I|L}{I|L}{[C(Carbamidomethyl (C))E]|[WC]}WAA{M(Oxidation (M))|F};{[VA]|[{I|L}G]}{[QS]|[NT]}[C(Carbamidomethyl (C))N]{I|L}A{M(Oxidation (M))|F};[{I|L}A][NS][C(Carbamidomethyl (C))N]{I|L}A{M(Oxidation (M))|F} 3.9944;3.9678;3.792;3.3372;3.1608;3.0674;3.0448;2.8337;2.6658;2.6369 -;-;-;-;-;-;-;-;-;- 1653 1 1.573 141665.3 0.449999988079071 14477 5859 20324 HBL1_DMSO_200M_050219_1,20338 HBL1_DMSO_200M_050219_1,20338,FIFFMAAF False False HFGGGGFLAF 98.901425 505.24766844511 1314928.75 20324.0 nc|ENSG00000154328|Q969S2-4|NEIL2;;ENSG00000154328|ENST00000284503|NEIL2;;nc|ENSG00000154328|Q969S2-2|NEIL2;;ENST00000524741.1_1_8:11640652-11643779:+|nuORF;;nc|ENSG00000154328|Q969S2-3|NEIL2 5.44325852394104 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20339 98.915 800.0 169050.0 25 0 6473.3 + 45612 YVKLPDANQLL 11 142 637.3609347391687 1272.7073165451372 2 637.3611938357353 MULTI CID FTMS 0 0 0 20324 109345.09375 0.4422473904533245 -2 0.1752700805664062 15 Unmodified _YVKLPDANQLL_ REV__ENSG00000019582|ENST00000009530|CD74;REV__nc|ENSG00000019582|P04233-2|CD74;REV__nc|ENSG00000019582|P04233-4|CD74;REV__nc|ENSG00000019582|P04233-5|CD74 36.506200033944 0.2662161991516171 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV{I|L}VGSNQ{I|L}{I|L} 12 -1 + 110.34 0.0 0.0 8.6699 8.6699 88.703 0.0 0.0 0.0 6.867355479190067 16.611814434466197 6.867355479190067 4.203103093438969 0 0.5 1.0969100130080565 2.721848749616356 0.7134679910804405 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV{I|L}VGSNQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SVV{I|L}GSNQ{I|L}{I|L};{[TV]|[{I|L}S]}MV{I|L}VGSNQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV{I|L}VGSN[AG]{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L}VVGSNQ{I|L}{I|L};{[TV]|[{I|L}S]}MVV{I|L}GSNQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SVVG{I|L}SNQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV{I|L}VGSGGQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SVV{I|L}GSN[AG]{I|L}{I|L};{[TV]|[{I|L}S]}MV{I|L}VGSN[AG]{I|L}{I|L} 8.6699;8.3397;8.1303;7.955;7.9277;7.8001;7.7905;7.7282;7.6248;7.4155 -;-;-;-;-;-;-;-;-;- 13801 1 1.573 113272.1 0.4799999892711639 14478 5859 20324 HBL1_DMSO_200M_050219_1,20339 HBL1_DMSO_200M_050219_1,20339,YVKLPDANQLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20340 98.926 514.0 194490.0 25 0 35082.0 + 30257 QYEGGPLFSL 10 128 555.7768449651408 1109.5391369970814 2 555.7778808474541 MULTI CID FTMS 0 0 0 20324 94589.890625 0.484993975382387 -5 0.6015548706054688 16 Unmodified _QYEGGPLFSL_ REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__ENST00000559300.5_1_15:90760732-90761085:+|nuORF;REV__nc|ENSG00000185033|Q9NPR2-2|SEMA4B 49.93300154707207 0.0805441195901191 3 {I|L}[HQ]NS{M(Oxidation (M))|F} 6 -1 37.797 0.0 0.0 3.4065 0.0 0.0 365.1936468692716 0.0 365.1936468692716 0.0 8.8141249606198 0.0 0.0 0 0.0 0.0 1.110924374808178 0.8807196863200843 {I|L}[HQ]NS{M(Oxidation (M))|F} 3.4065 - 1379 + 1 1.573 85897.5 1.0 14479 5859 20324 HBL1_DMSO_200M_050219_1,20340 HBL1_DMSO_200M_050219_1,20340,QYEGGPLFSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20342 98.93 11.0 7526900.0 25 0 751980.0 -1 0 81 917.095871020223 2748.2657836608687 3 917.4318115115166 MULTI CID FTMS 0 0 0 20341 6578802.5 0.8857455578775828 1 -0.106842041015625 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 60.583 0.0 0.0 2.2044 0.0 0.0 0.0 1707.6502218528449 1707.6502218528449 -0.6191569410931663 0.0 -0.6191569410931663 0.0 0 0.5 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.2044 - 250 1 1.6 66669.5 1.0 14480 5860 20341 HBL1_DMSO_200M_050219_1,20342 HBL1_DMSO_200M_050219_1,20342, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20343 98.931 22.0 3888600.0 25 0 357200.0 -1 0 77 688.0735427739423 2748.265065229369 4 688.3256713747978 MULTI CID FTMS 0 0 0 20341 3895466.0 0.677613880742743 1 -0.106842041015625 2 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 54.105 0.0 0.0 1.9687 0.0 0.0 0.0 1806.7204796017995 1806.7204796017995 21.122731327798547 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.9687 - 1432 1 1.6 71116.0 1.0 14481 5860 20341 HBL1_DMSO_200M_050219_1,20343 HBL1_DMSO_200M_050219_1,20343, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20344 98.933 37.0 1701600.0 25 0 234090.0 + 15297 IPISNILMV 9 88 508.29634384823146 1014.5781347632628 2 508.2965576052666 MULTI CID FTMS 0 0 0 20341 1431833.25 0.7097389243266129 -1 0.113006591796875 3 Oxidation (M) _IPISNILM(Oxidation (M))V_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 57.47134341890925 0.0274820932774257 3 [{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V 9 2 + 63.985 0.0 0.0 6.3065 6.3065 77.785 0.0 0.0 0.0 0.6297781291262794 3.480137174129325 0.6297781291262794 0.6297781291262794 0 0.7742275032520141 1.5228787452803376 0.6382104921644451 0.6549471895720985 [{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}N{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}NP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}{I|L}NP{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}PN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}N{I|L}{I|L}P{I|L}{M(Oxidation (M))|F}V;[{I|L}P]{I|L}[NS]{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]SGG{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}GG{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}GGP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V 6.3065;6.2445;6.1659;5.5555;5.2758;5.1833;5.175;4.7534;4.6913;4.6128 -;-;-;-;-;-;+;-;-;- + 632 1 1.6 58264.1 1.0 14482 5860 20341 HBL1_DMSO_200M_050219_1,20344 HBL1_DMSO_200M_050219_1,20344,IPISNILMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20345 98.934 76.0 929120.0 25 0 80209.0 + 20565 LLNEILEQV 9 94 535.8088256567783 0 535.8087036013603 PEAK CID FTMS 0 0 0 20341 827107.5 0.8633152659992326 1 -0.106842041015625 4 Unmodified _LLNEILEQV_ ENSG00000109805|ENST00000251496|NCAPG 56.17704186161178 0.0208571546621878 3 E{I|L}{I|L}Q 4 5 27.841 0.0 0.0 2.6029 0.0 0.0 358.22640267898765 225.0886171930297 583.3150198720174 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 1.0941876774005248 E{I|L}{I|L}Q 2.6029 - 192 + 1 1.6 61286.9 1.0 14483 5860 20341 HBL1_DMSO_200M_050219_1,20345 HBL1_DMSO_200M_050219_1,20345,LLNEILEQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20346 98.936 77.0 931530.0 25 0 128720.0 + 19992 LILEGNDIELV 11 84 614.3455727295332 1226.6765925258662 2 614.3458129763603 MULTI CID FTMS 0 0 0 20341 791096.75 1.0 0 0.0 5 Unmodified _LILEGNDIELV_ ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENST00000475906.1_1_14:35732014-35732239:+|nuORF;ENST00000511643.5_1_4:39456165-39456631:-|nuORF 53.832793166522166 0.0964040679835549 3 {[QN]|[E{I|L}]|[KN]}D[NG]{I|L}{I|L}E{I|L}{I|L}V 11 5 + 75.182 0.0 0.0 6.1289 6.1289 80.42 0.0 0.0 0.0 19.867585652254192 48.4992606043883 19.867585652254192 2.697953115119077 0 0.8182503180159344 1.3010299956639813 1.305462187404089 1.8494850021680087 {[QN]|[E{I|L}]|[KN]}D[NG]{I|L}{I|L}E{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}D[NG]{I|L}{I|L}{I|L}E{I|L}V;{[QN]|[E{I|L}]|[KN]}D[NG]{I|L}E{I|L}{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}D[NG]E{I|L}{I|L}{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}[HM]{M(Oxidation (M))|F}{I|L}{I|L}V;{I|L}{I|L}E{I|L}[HM]{M(Oxidation (M))|F}{I|L}{I|L}V;{I|L}{I|L}{I|L}E[HM]{M(Oxidation (M))|F}{I|L}{I|L}V 6.1289;5.909;5.4134;4.9538;3.3506;2.9419;2.9419 -;-;-;-;-;-;- 294 1 1.6 58128.2 1.0 14484 5860 20341 HBL1_DMSO_200M_050219_1,20346 HBL1_DMSO_200M_050219_1,20346,LILEGNDIELV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20347 98.938 89.0 581980.0 25 0 69279.0 + 36552 TALAQIMTI 9 74 481.27278142206296 960.531009910926 2 481.2731811404228 MULTI CID FTMS 0 0 0 20341 520541.09375 0.1570719316813668 3 -0.3066253662109375 6 Unmodified _TALAQIMTI_ ENSG00000097046|ENST00000234626|CDC7 61.357469665136826 0.0253304979873734 3 [TA]{I|L}AQ{I|L} 6 3 48.096 0.0 0.0 5.0072 0.0 0.0 0.0 360.1611728350072 360.1611728350072 20.66061246681059 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.524227503252014 0.0 + [TA]{I|L}AQ{I|L} 5.0072 + + 303 1 1.6 47053.1 1.0 14485 5860 20341 HBL1_DMSO_200M_050219_1,20347 HBL1_DMSO_200M_050219_1,20347,TALAQIMTI True True TALAQIMTI 98.938017 481.273181140423 101902000.0 20341.0 ENSG00000097046|ENST00000234626|CDC7 4.553375800450643 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20348 98.942 206.0 613470.0 25 0 25629.0 + 33725 SLADFMQEV 9 103 1039.4772855032209 1038.470009036621 1 1039.476123034954 MULTI CID FTMS 0 0 0 20341 477234.375 1.0 0 0.0 7 Unmodified _SLADFMQEV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 140.63315402491853 0.0246263635878117 3 {[TV]|[{I|L}S]}AD{M(Oxidation (M))|F}MQEV 9 0 + 110.06 0.0 0.0 10.599 10.599 97.656 0.0 0.0 0.0 17.073259432077563 16.478174818886373 16.478174818886373 16.822581265925436 0 1.7658715643802765 1.6989700043360187 2.397940008672037 0.7614393726401688 + + {[TV]|[{I|L}S]}AD{M(Oxidation (M))|F}MQEV;{[TV]|[{I|L}S]}AD{M(Oxidation (M))|F}M[AG]EV;{NN|[MP]|[D{I|L}]|[EV]}AS{M(Oxidation (M))|F}MQEV;{[TV]|[{I|L}S]}W{M(Oxidation (M))|F}MQEV;{NN|[MP]|[D{I|L}]|[EV]}AS{M(Oxidation (M))|F}M[AG]EV;{[TV]|[{I|L}S]}W{M(Oxidation (M))|F}M[AG]EV;{NN|[MP]|[D{I|L}]|[EV]}P[HA]MQEV;{[TV]|[{I|L}S]}AD{M(Oxidation (M))|F}[PS]G{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}C(Carbamidomethyl (C))Y{I|L}QEV;{[TV]|[{I|L}S]}AD{M(Oxidation (M))|F}[EC]RV 10.599;8.9788;8.9547;8.7952;8.0679;7.1701;7.0065;6.8864;6.7875;6.6129 +;-;-;-;-;-;-;-;-;- + 5469 1 1.6 87038.9 1.0 14486 5860 20341 HBL1_DMSO_200M_050219_1,20348 HBL1_DMSO_200M_050219_1,20348,SLADFMQEV True True SLADFMQEV 98.941979 1039.47612303495 3552700.75 20341.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 8.702887535095215 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20349 98.944 103.0 584820.0 25 0 60088.0 + 35128 SQYPFPVTL 9 86 526.2768031737937 1050.5390534143874 2 526.2767822146416 MULTI CID FTMS 0 0 0 20341 399275.4375 0.2871255324720176 4 -0.4524002075195312 8 Unmodified _SQYPFPVTL_ ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-2|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L 32.78568957990786 0.1150597335874693 3 {I|L}[R{I|L}]PVT{I|L} 7 5 29.868 0.0 0.0 2.8431 0.0 0.0 240.00592460754984 0.0 240.00592460754984 0.0 6.892404878284264 0.0 0.0 0 0.7742275032520141 0.0 0.6139829889124311 0.0 {I|L}[R{I|L}]PVT{I|L} 2.8431 - 221 + 1 1.6 55268.4 1.0 14487 5860 20341 HBL1_DMSO_200M_050219_1,20349 HBL1_DMSO_200M_050219_1,20349,SQYPFPVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20350 98.947 124.0 424140.0 25 0 56185.0 + 24493 MIIENFEAL 9 86 540.2759899405407 1078.5374269478814 2 540.2757446169853 MULTI CID FTMS 0 0 0 20341 337026.5 0.5536312768862742 -1 0.113006591796875 9 Unmodified _MIIENFEAL_ ENSG00000139746|ENST00000438737|RBM26;ENST00000472143.2_1_13:79951480-79979915:-|nuORF;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26;nc|ENSG00000139746|Q5T8P6-6|RBM26 42.09456458481378 0.0639583784996157 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EN{M(Oxidation (M))|F} 6 3 43.606 0.0 0.0 4.0431 0.0 0.0 0.0 328.15172073133766 328.15172073133766 19.476212463643417 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.4247425010840047 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EN{M(Oxidation (M))|F} 4.0431 + + 263 1 1.6 44184.6 1.0 14488 5860 20341 HBL1_DMSO_200M_050219_1,20350 HBL1_DMSO_200M_050219_1,20350,MIIENFEAL True True MIIENFEAL 98.946756 540.275744616985 3980655.75 20341.0 nc|ENSG00000139746|Q5T8P6-6|RBM26;;ENST00000472143.2_1_13:79951480-79979915:-|nuORF;;ENSG00000139746|ENST00000438737|RBM26;;nc|ENSG00000139746|Q5T8P6-3|RBM26;;nc|ENSG00000139746|Q5T8P6-2|RBM26 6.344391028086345 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20351 98.961 800.0 401560.0 25 0 53896.0 + 34397 SLVATLQSL 9 147 931.5466787751808 930.5394023085807 1 932.5497314333916 MULTI CID FTMS 0 0 0 20341 257230.625 0.1772050777126044 4 -0.4524002075195312 10 Unmodified _SLVATLQSL_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27;nc|ENSG00000165949|P40305-4|IFI27 75.76082778847304 0.0188720312721366 3 [{I|L}P]AAT{I|L}{M(Oxidation (M))|F}S 8 4 41.1 0.0 0.0 4.4168 0.0 0.0 0.0 127.07367900219334 127.07367900219334 13.34466076752097 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.4291746928241125 0.0 [{I|L}P]AAT{I|L}{M(Oxidation (M))|F}S 4.4168 - 3634 1 1.6 208068.6 0.9100000262260436 14489 5860 20341 HBL1_DMSO_200M_050219_1,20351 HBL1_DMSO_200M_050219_1,20351,SLVATLQSL True True SLVATLQSL 98.960608 932.549731433392 27607856.0 20341.0 nc|ENSG00000165949|P40305-4|IFI27;;nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27;;nc|ENSG00000165949|P40305-3|IFI27 4.322465737660726 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20352 98.97 523.0 174670.0 25 0 21961.0 + 17211 KLLEVQILEV 10 111 592.3682218216856 1182.721890710171 2 592.3688842654228 MULTI CID FTMS 0 0 0 20341 200166.015625 0.4416726765927039 3 -0.3066253662109375 11 Unmodified _KLLEVQILEV_ ENSG00000135968|ENST00000309863|GCC2 74.19965305603844 0.0188013450058842 3 {[QN]|[E{I|L}]|[KN]}N{I|L}{I|L}K{I|L}{I|L}EV 10 5 + 88.196 0.0 0.0 7.4571 7.4571 80.742 0.0 0.0 0.0 0.4672033070727366 16.532125137753454 0.4672033070727366 0.4672033070727366 0 0.6109243748081782 1.3979400086720375 0.9698565171985376 0.805462187404089 {[QN]|[E{I|L}]|[KN]}N{I|L}{I|L}K{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{I|L}K{I|L}{I|L}EV;{I|L}{I|L}KEVQ{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]VQ{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}GG{I|L}{I|L}K{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[AG]{I|L}{I|L}K{I|L}{I|L}EV;{I|L}{I|L}NE{I|L}K{I|L}{I|L}EV;{I|L}{I|L}KEV[AG]{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]V[AG]{I|L}{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}{I|L}K{I|L}{I|L}EV 7.4571;7.4176;6.9277;6.8808;6.6822;6.6427;6.4277;6.1528;6.1059;5.9811 -;-;-;-;-;-;-;-;-;- 508 1 1.6 75131.3 1.0 14490 5860 20341 HBL1_DMSO_200M_050219_1,20352 HBL1_DMSO_200M_050219_1,20352,KLLEVQILEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20353 98.984 800.0 199910.0 25 0 10179.0 -1 0 137 799.6372437539173 3194.519869149269 4 799.8917724490166 MULTI CID FTMS 0 0 0 20341 175239.703125 0.2707829428399054 3 -0.3066253662109375 12 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 68.427 0.0 0.0 2.142 0.0 0.0 0.0 2153.907662669344 2153.907662669344 52.24214396804989 0.0 0.0 0.0 0 1.5 1.5228787452803376 0.2614393726401688 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.142 - 1133 1 1.6 115212.8 0.6899999976158142 14491 5860 20341 HBL1_DMSO_200M_050219_1,20353 HBL1_DMSO_200M_050219_1,20353, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20354 98.997 800.0 160880.0 25 0 6192.7 -1 0 126 774.3750204443423 3093.470975910969 4 774.6248657107353 MULTI CID FTMS 0 0 0 20341 178583.078125 0.6521606924112261 1 -0.106842041015625 13 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 67.573 0.0 0.0 2.1844 0.0 0.0 0.0 2052.8612096358315 2052.8612096358315 23.17532531436136 0.0 0.0 0.0 0 1.5 1.3979400086720375 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.1844 - 834 1 1.6 93251.9 0.6800000071525574 14492 5860 20341 HBL1_DMSO_200M_050219_1,20354 HBL1_DMSO_200M_050219_1,20354, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20355 99.011 800.0 156820.0 25 0 15113.0 -1 0 123 682.67336718979 2044.99827216957 3 683.0079223513603 MULTI CID FTMS 0 0 0 20341 120714.5546875 0.4045442644720189 -3 0.2882766723632812 14 3 [VP]EM{I|L}[YQ]QA 9 -1 36.85 0.0 0.0 1.802 0.0 0.0 0.0 982.452650229882 982.452650229882 6.215234340851495 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.2302046884880938 0.4247425010840047 [VP]EM{I|L}[YQ]QA 1.802 - 1876 1 1.6 97278.1 0.550000011920929 14493 5860 20341 HBL1_DMSO_200M_050219_1,20355 HBL1_DMSO_200M_050219_1,20355, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20356 99.027 800.0 283970.0 25 0 11795.0 -1 0 182 656.0343231079554 1965.081139924066 3 656.3716308474541 MULTI CID FTMS 0 0 0 20341 130459.515625 0.5220178650283858 -3 0.2882766723632812 15 3 SSQ{I|L}VV 6 -1 50.425 0.0 0.0 2.566 0.0 0.0 1333.7052479474626 0.0 1333.7052479474626 0.0 22.71652514092061 0.0 0.0 0 0.5 0.0 1.055462187404089 0.0 SSQ{I|L}VV 2.566 - 3555 1 1.6 172099.6 0.6100000143051147 14494 5860 20341 HBL1_DMSO_200M_050219_1,20356 HBL1_DMSO_200M_050219_1,20356, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20357 99.032 318.0 206930.0 25 0 19203.0 + 8907 FAHPDLFVSI 10 92 573.3025606257743 1144.5905683183485 2 573.3035156130791 MULTI CID FTMS 0 0 0 20341 112364.8515625 0.632537224949655 -3 0.2882766723632812 16 Unmodified _FAHPDLFVSI_ ENSG00000117859|ENST00000428468|OSBPL9;ENST00000533825.1_1_1:52237763-52247292:+|nuORF;nc|ENSG00000117859|Q96SU4-2|OSBPL9;nc|ENSG00000117859|Q96SU4-3|OSBPL9;nc|ENSG00000117859|Q96SU4-4|OSBPL9;nc|ENSG00000117859|Q96SU4-5|OSBPL9;nc|ENSG00000117859|Q96SU4-6|OSBPL9;nc|ENSG00000117859|Q96SU4-7|OSBPL9 24.020572477871973 0.4289996903560794 3 {[TV]|[{I|L}S]}PY[YG]{M(Oxidation (M))|F}VS{I|L} 10 6 + 46.661 0.0 0.0 4.0766 4.0766 82.869 0.0 0.0 0.0 11.542294029923 10.452490459521968 10.452490459521968 11.542294029923 0 0.8182503180159344 1.5228787452803376 0.2614393726401688 0.0 {[TV]|[{I|L}S]}PY[YG]{M(Oxidation (M))|F}VS{I|L};{I|L}{I|L}[MD][HA]{M(Oxidation (M))|F}VS{I|L};{[TV]|[{I|L}S]}PY{I|L}[EP]V{NN|[MP]|[D{I|L}]|[EV]};[DP]{I|L}{M(Oxidation (M))|F}[HA]{M(Oxidation (M))|F}VS{I|L};{[QN]|[E{I|L}]|[KN]}{[ET]|[MV]}[HA]{M(Oxidation (M))|F}VS{I|L};{[TV]|[{I|L}S]}PYT[HT]V{NN|[MP]|[D{I|L}]|[EV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}{M(Oxidation (M))|F}VS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]{I|L}{M(Oxidation (M))|F}VS{I|L};{[TV]|[{I|L}S]}P[KP][YN]V{NN|[MP]|[D{I|L}]|[EV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DP][HA]{M(Oxidation (M))|F}VS{I|L} 4.0766;3.0682;2.5727;2.21;2.1515;1.8929;1.6723;1.6089;1.3067;1.2847 -;-;-;-;-;-;-;-;-;- 313 1 1.6 57115.4 1.0 14495 5860 20341 HBL1_DMSO_200M_050219_1,20357 HBL1_DMSO_200M_050219_1,20357,FAHPDLFVSI False True FAHPDLFVSI 99.0324 573.303515613079 2550921.5 20341.0 ENST00000533825.1_1_1:52237763-52247292:+|nuORF;;nc|ENSG00000117859|Q96SU4-4|OSBPL9;;nc|ENSG00000117859|Q96SU4-2|OSBPL9;;nc|ENSG00000117859|Q96SU4-7|OSBPL9;;ENSG00000117859|ENST00000428468|OSBPL9;;nc|ENSG00000117859|Q96SU4-5|OSBPL9;;nc|ENSG00000117859|Q96SU4-6|OSBPL9;;nc|ENSG00000117859|Q96SU4-3|OSBPL9 5.659000237782796 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20359 99.037 17.0 4386000.0 25 0 1004100.0 + 35875 SVLNVLHSL 9 86 491.2899217556439 980.5652905780878 2 491.2903015017509 MULTI CID FTMS 0 0 0 20358 3994919.75 1.0 0 0.0 1 Unmodified _SVLNVLHSL_ ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L 74.92900055777586 0.0191935851694334 3 [VS]{I|L}NV{I|L}HS{I|L} 9 0 + 84.727 0.0 0.0 8.6407 8.6407 96.597 0.0 0.0 0.0 40.86049291400624 16.017983289975007 16.017983289975007 17.26280941356464 0 0.7742275032520141 2.0 1.555462187404089 0.805462187404089 + + [VS]{I|L}NV{I|L}HS{I|L};[VS]{I|L}GGV{I|L}HS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{I|L}VN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VGG{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}QN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}VAAVN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{I|L}VGG{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}[AG]N{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}QGG{I|L}[PA] 8.6407;6.8802;6.5697;5.6306;5.6306;5.3703;5.144;4.696;4.4312;4.4312 +;-;-;-;-;-;-;-;-;- + 525 + 1 1.601 62693.5 1.0 14496 5861 20358 HBL1_DMSO_200M_050219_1,20359 HBL1_DMSO_200M_050219_1,20359,SVLNVLHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20360 99.039 75.0 793890.0 25 0 77011.0 + 30895 RIPPWMEVV 9 72 563.8076541439117 1125.6007553546233 2 563.8076660037041 MULTI CID FTMS 0 0 0 20358 627029.1875 1.0 0 0.0 2 Unmodified _RIPPWMEVV_ ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-4|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B 29.081581746732265 0.1611639662936252 3 MEVV 4 5 33.928 0.0 0.0 3.0142 0.0 0.0 649.3709923321117 0.0 649.3709923321117 0.0 11.70941280735775 0.0 0.0 0 0.5 0.0 0.0 0.0 + MEVV 3.0142 + + 56 1 1.601 54789.4 1.0 14497 5861 20358 HBL1_DMSO_200M_050219_1,20360 HBL1_DMSO_200M_050219_1,20360,RIPPWMEVV False True RIPPWMEVV 99.038718 563.807666003704 8377671.5 20358.0 nc|ENSG00000125630|Q9H9Y6-5|POLR1B;;ENSG00000125630|ENST00000263331|POLR1B;;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;;nc|ENSG00000125630|Q9H9Y6-4|POLR1B 7.316250801086426 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20361 99.042 144.0 505450.0 25 0 72635.0 + 27720 PLLPPIPAL 9 85 465.8046970508198 929.5948411684396 2 465.8051330447197 MULTI CID FTMS 0 0 0 20358 430502.1875 0.1454728316083654 10 -0.8921890258789062 3 Unmodified _PLLPPIPAL_ CDK12|p.P553L|1|0.36|ENSG00000167258|chr17:39471490-39471490|C/T|missense_variant 56.04830969593885 0.0282699710924866 3 {I|L}{I|L}PPP{I|L}PA{I|L} 9 2 + 63.242 0.0 0.0 6.8032 6.8032 93.145 0.0 0.0 0.0 35.82940880794289 14.431890546242345 14.431890546242345 20.00508444608478 0 1.066901560044258 2.0 0.0 0.0 {I|L}{I|L}PPP{I|L}PA{I|L};{I|L}{I|L}[YK]{I|L}PA{I|L} 6.8032;4.6512 -;- 319 + 1 1.601 62964.0 1.0 14498 5861 20358 HBL1_DMSO_200M_050219_1,20361 HBL1_DMSO_200M_050219_1,20361,PLLPPIPAL True False False False variant PXD020620_cell_line HBL1_DMSO_200M_050219_1 20362 99.044 119.0 594820.0 25 0 73980.0 + 34453 SLYKSFLQL 9 100 549.8132235330916 1097.611894132983 2 549.8140136599541 MULTI CID FTMS 0 0 0 20358 416619.875 0.923948638579724 1 -0.12890625 4 Unmodified _SLYKSFLQL_ ENSG00000185883|ENST00000330398|ATP6V0C 43.85829265575387 0.0542763391141878 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}KYS{I|L}[Q{I|L}] 9 3 + 64.676 0.0 0.0 5.8924 5.8924 89.613 0.0 0.0 0.0 17.269987279362624 50.08523695241493 17.269987279362624 14.776296993281406 0 0.805462187404089 2.0 1.1549471895720984 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}KYS{I|L}[Q{I|L}];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}Q[H{I|L}]{I|L}P[SG];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}KYS{I|L}P[SG];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[AG][H{I|L}]{I|L}P[SG];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}SYK{I|L}C{I|L};{[TV]|[{I|L}S]}[{I|L}T]VPPMQ{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}T{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}SYKMVV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}K[MT]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 5.8924;4.5462;4.1466;3.7112;3.677;3.6583;3.4061;3.2524;3.1319;3.1319 -;-;-;-;-;-;-;-;-;- 812 1 1.601 62181.5 1.0 14499 5861 20358 HBL1_DMSO_200M_050219_1,20362 HBL1_DMSO_200M_050219_1,20362,SLYKSFLQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20363 99.048 178.0 524770.0 25 0 53722.0 + 21107 LPALLQQL 8 104 448.28384414161 894.55313535002 2 448.2842285037041 MULTI CID FTMS 0 0 0 20358 396566.90625 1.0 0 0.0 5 Unmodified _LPALLQQL_ ENSG00000179262|ENST00000586534|RAD23A;nc|ENSG00000179262|P54725-2|RAD23A;nc|ENSG00000179262|P54725-3|RAD23A 45.7499826716795 0.1592378023510922 3 [{I|L}P]A{I|L}{I|L}Q[Q{I|L}] 8 0 + 43.927 0.0 0.0 4.9105 4.9105 78.601 0.0 0.0 0.0 4.0823996531185 6.989700043360188 4.0823996531185 4.0823996531185 0 0.25 1.3010299956639813 0.0 0.0 + + [{I|L}P]A{I|L}{I|L}Q[Q{I|L}];[PA]{I|L}{I|L}{I|L}Q[Q{I|L}];[{I|L}P]A{I|L}Q{I|L}[Q{I|L}];[PA]{I|L}{I|L}Q{I|L}[Q{I|L}];[{I|L}P]A{I|L}{I|L}[AG][Q{I|L}];[{I|L}A]P{I|L}{I|L}Q[Q{I|L}];[PA]{I|L}{I|L}{I|L}[AG][Q{I|L}];[{I|L}P]A{I|L}[AG]{I|L}[Q{I|L}];[{I|L}A]P{I|L}Q{I|L}[Q{I|L}];[PA]{I|L}{I|L}[AG]{I|L}[Q{I|L}] 4.9105;4.4541;4.3771;3.9207;3.8751;3.4759;3.4187;3.3417;2.9425;2.8853 +;-;-;-;-;-;-;-;-;- + 159 1 1.601 77637.4 1.0 14500 5861 20358 HBL1_DMSO_200M_050219_1,20363 HBL1_DMSO_200M_050219_1,20363,LPALLQQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20364 99.05 107.0 572920.0 25 0 79996.0 -1 0 70 530.1341081022232 529.1268316356231 1 530.1342651247978 MULTI CID FTMS 0 0 0 20358 369213.5 0.2794666069201221 -3 0.2970657348632812 6 3 {NN|[MP]|[D{I|L}]|[EV]}Q 3 -1 15.272 0.0 0.0 2.8863 0.0 0.0 0.0 169.93390496009502 169.93390496009502 0.8354605145007508 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}Q 2.8863 - 39 1 1.601 54744.2 1.0 14501 5861 20358 HBL1_DMSO_200M_050219_1,20364 HBL1_DMSO_200M_050219_1,20364, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20365 99.052 122.0 473320.0 25 0 65936.0 + 6542 EALHYMLLV 9 81 544.7941271080545 1087.5737012829088 2 544.7944213747978 MULTI CID FTMS 0 0 0 20358 342645.1875 0.5910790913616217 2 -0.1997833251953125 7 Unmodified _EALHYMLLV_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF 44.40701690623563 0.0526327925666318 3 {[QN]|[E{I|L}]|[KN]}[HA]YM{I|L}V{I|L} 9 4 + 41.659 0.0 0.0 3.8305 3.8305 84.198 0.0 0.0 0.0 1.4330799295148466 19.696596782814808 1.4330799295148466 26.31086445993664 0 0.5994850021680094 0.0 1.7302046884880935 0.0 {[QN]|[E{I|L}]|[KN]}[HA]YM{I|L}V{I|L};{[TV]|[{I|L}S]}[MT]Y[YV]V{I|L};[VS][{M(Oxidation (M))|F}V]Y[YV]V{I|L} 3.8305;1.4113;0.86558 -;-;- 226 1 1.601 55503.7 1.0 14502 5861 20358 HBL1_DMSO_200M_050219_1,20365 HBL1_DMSO_200M_050219_1,20365,EALHYMLLV True True EALHYMLLV 99.052328 544.794421374798 10803394.0 20358.0 ENST00000428210.5_1_2:61720980-61752425:-|nuORF;;ENSG00000082898|ENST00000401558|XPO1 6.658635139465332 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20366 99.056 214.0 288640.0 25 0 18977.0 26877 PDELIIEVLQ 10 95 584.8268733841663 1167.6391938351326 2 584.8271972537041 MULTI CID FTMS 0 0 0 20358 270634.84375 0.8390687799191985 -2 0.2198486328125 8 Unmodified _PDELIIEVLQ_ ENSG00000164306|ENST00000314970|PRIMPOL;nc|ENSG00000164306|Q96LW4-2|PRIMPOL 29.081581746732265 0.3152867722954398 3 AE{I|L}{I|L}HEAV 8 6 61.491 0.0 0.0 5.2662 0.0 0.0 287.18321346579506 0.0 287.18321346579506 0.0 36.966080011321765 0.0 0.0 0 0.0 0.0 1.4604093769761874 0.0 AE{I|L}{I|L}HEAV 5.2662 - 1743 + 1 1.601 53924.8 1.0 14503 5861 20358 HBL1_DMSO_200M_050219_1,20366 HBL1_DMSO_200M_050219_1,20366,PDELIIEVLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20367 99.063 393.0 257110.0 25 0 32694.0 + 45520 YTTDFIYQL 9 143 582.2843721419207 1162.5541913506413 2 582.2848388552666 MULTI CID FTMS 0 0 0 20358 227836.8125 1.0 0 0.0 9 Unmodified _YTTDFIYQL_ ENSG00000067057|ENST00000381125|PFKP;nc|ENSG00000067057|Q01813-2|PFKP 67.34385681178166 0.0221257235307089 3 {I|L}YTEC{I|L} 6 7 32.128 0.0 0.0 2.7635 0.0 0.0 422.2148712351221 0.0 422.2148712351221 0.0 8.450528104279016 0.0 0.0 0 0.3494850021680094 0.0 0.9247425010840048 0.0 {I|L}YTEC{I|L} 2.7635 - 956 + 1 1.601 77683.8 1.0 14504 5861 20358 HBL1_DMSO_200M_050219_1,20367 HBL1_DMSO_200M_050219_1,20367,YTTDFIYQL True True YTTDFIYQL 99.063437 582.284838855267 2400284.25 20358.0 nc|ENSG00000067057|Q01813-2|PFKP;;ENSG00000067057|ENST00000381125|PFKP 6.282215118408203 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20368 99.066 135.0 412350.0 25 0 64421.0 + 9861 FPFGYVSNI 9 100 522.2638698765668 1042.5131868199337 2 522.2631103396416 MULTI CID FTMS 0 0 0 20358 219916.546875 0.3329652686691466 10 -0.8921890258789062 10 Unmodified _FPFGYVSNI_ ENSG00000159259|ENST00000314103|CHAF1B;ENST00000481458.1_1_21:37771819-37785123:+|nuORF 26.34127834903884 0.1960301806784604 3 [{I|L}T]YS{M(Oxidation (M))|F}V[WK] 8 8 + 33.957 0.0 0.0 3.2572 3.2572 74.82 0.0 0.0 0.0 2.3530943722164466 12.042866041035651 2.3530943722164466 4.771212547196626 0 0.2742275032520141 2.0 0.0 0.0 [{I|L}T]YS{M(Oxidation (M))|F}V[WK];[{I|L}T]YSV{M(Oxidation (M))|F}[WK];[{I|L}T]T[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}[WK];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YR]{M(Oxidation (M))|F}[WK];{NN|[MP]|[D{I|L}]|[EV]}P[HT]{M(Oxidation (M))|F}[WK];{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T]YV[WK];{NN|[MP]|[D{I|L}]|[EV]}[HA]HH[WK] 3.2572;2.7996;2.0789;1.4084;1.2912;1.1721;0.52782 -;-;-;-;-;-;- 424 1 1.601 53270.4 1.0 14505 5861 20358 HBL1_DMSO_200M_050219_1,20368 HBL1_DMSO_200M_050219_1,20368,FPFGYVSNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20369 99.07 212.0 274740.0 25 0 25784.0 + 3025 AVLDLSWNKL 10 91 579.8287046478856 1157.6428563625711 2 579.8295165896416 MULTI CID FTMS 0 0 0 20358 204392.734375 0.3123146687870388 2 -0.1997833251953125 11 Unmodified _AVLDLSWNKL_ ENSG00000136045|ENST00000412830|PWP1 29.84058131909904 0.2982332456971691 3 {[VA]|[{I|L}G]}{I|L}D{I|L}SWNK{I|L} 10 0 + 61.036 0.0 0.0 5.2724 5.2724 84.697 0.0 0.0 0.0 37.140012553530966 8.863781092484686 8.863781092484686 9.164539485499256 0 1.1677353201839438 2.0 0.3494850021680094 0.0 + + {[VA]|[{I|L}G]}{I|L}D{I|L}SWNK{I|L};{[VA]|[{I|L}G]}{I|L}D{I|L}SWGGK{I|L};{[VA]|[{I|L}G]}{I|L}D{I|L}SW[KQ]V;{[VA]|[{I|L}G]}[KT][QA]WNK{I|L};{[VA]|[{I|L}G]}[QT][QA]WNK{I|L};[KT]AV[QA]WNK{I|L};[KT]AV[QA]WGGK{I|L};[KT]AV[QA]W[KQ]V 5.2724;4.4808;4.1185;3.2291;3.2291;2.2342;1.4425;1.0803 +;-;-;-;-;-;-;- + 145 + 1 1.601 52731.7 1.0 14506 5861 20358 HBL1_DMSO_200M_050219_1,20369 HBL1_DMSO_200M_050219_1,20369,AVLDLSWNKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20370 99.074 195.0 286850.0 25 0 29094.0 + 16454 KAIGVGLGFEL 11 100 552.3258755077179 1102.6371980822355 2 552.3268310427666 MULTI CID FTMS 0 0 0 20358 173795.828125 1.0 0 0.0 12 Unmodified _KAIGVGLGFEL_ ENSG00000149313|ENST00000278618|AASDHPPT 22.65808497894818 0.560183898709508 3 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}G{I|L}G{M(Oxidation (M))|F}E{I|L} 10 3 + 56.828 0.0 0.0 5.1538 5.1538 87.649 0.0 0.0 0.0 4.338162265355408 45.56860584704122 4.338162265355408 19.26213785839081 0 0.6109243748081782 0.6020599913279624 0.2302046884880938 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}G{I|L}G{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[K{I|L}]G{I|L}G{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}G{I|L}[W{M(Oxidation (M))|F}]{I|L};{[VA]|[{I|L}G]}G[K{I|L}]G{I|L}G{M(Oxidation (M))|F}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[K{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}Y[EP];{[VA]|[{I|L}G]}G[K{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[K{I|L}]G{I|L}[W{M(Oxidation (M))|F}]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[K{I|L}]G{I|L}GY[EP] 5.1538;3.4069;3.2831;2.9251;2.9007;1.5362;1.1523;1.1499;1.0544;1.0285 -;-;-;-;-;-;-;-;-;- 245 1 1.601 48975.3 1.0 14507 5861 20358 HBL1_DMSO_200M_050219_1,20370 HBL1_DMSO_200M_050219_1,20370,KAIGVGLGFEL False True KAIGVGLGFEL 99.073955 552.326831042767 1343054.25 20358.0 ENSG00000149313|ENST00000278618|AASDHPPT 4.402139981587728 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20371 99.081 399.0 206400.0 25 0 10380.0 -1 0 92 791.372936740873 2371.0969808228188 3 791.3745605349541 MULTI CID FTMS 0 0 0 20358 162131.328125 0.2650656722085096 23 -1.6929473876953125 13 3 {[HG]|PP}APPGDCNRAGM 13 -1 44.394 0.0 0.0 1.8723 0.0 0.0 0.0 1104.547581973438 1104.547581973438 18.868553754547968 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 {[HG]|PP}APPGDCNRAGM 1.8723 - 9236 1 1.601 65988.0 1.0 14508 5861 20358 HBL1_DMSO_200M_050219_1,20371 HBL1_DMSO_200M_050219_1,20371, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20372 99.095 800.0 134720.0 25 0 36558.0 + + 20763 KGDILTLL 8 120 436.7760632827287 871.5375736322575 2 436.7762023806572 MULTI CID FTMS 0 0 0 20358 118573.453125 1.0 0 0.0 14 Unmodified _LLTAQTIL_ nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1 60.38955033654506 0.1153153300159026 3 [{I|L}T][QA]{I|L}T{I|L}{I|L} 8 -1 + 62.203 0.0 0.0 7.1371 7.1371 85.879 0.0 0.0 0.0 11.769856214892371 40.70661194790922 11.769856214892371 4.273174902439578 0 0.9247425010840048 1.6989700043360187 1.4361818737241734 0.0 [{I|L}T][QA]{I|L}T{I|L}{I|L};[{I|L}T][QA]T{I|L}{I|L}{I|L};[{I|L}T]{I|L}[QA]T{I|L}{I|L};[{I|L}T][PS]KT{I|L}{I|L};{I|L}{I|L}T[QA]T{I|L}{I|L};[{I|L}P]{[MG]|[TS]}KT{I|L}{I|L};{I|L}{I|L}[DG]KT{I|L}{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}{I|L}T{I|L}{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}T{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[KG]E{I|L}{I|L}{I|L} 7.1371;6.6468;6.4969;6.0352;5.3495;5.0423;4.8878;4.6403;4.15;3.923 -;-;-;-;+;-;-;-;-;- + 399 1 1.601 87810.5 0.4399999976158142 14509 5861 20358 HBL1_DMSO_200M_050219_1,20372 HBL1_DMSO_200M_050219_1,20372,LLTAQTIL False False KGDILTLL 99.094932 436.776202380657 1271081.0 20358.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 2.0191470185915628 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20373 99.102 404.0 216690.0 25 0 17408.0 23679 LTSLEDPVILS 11 134 593.8315942634963 1185.6486355937925 2 594.3309203982353 MULTI CID FTMS 0 0 0 20358 116981.8359375 0.2962478116280442 8 -0.7429885864257812 15 Unmodified _LTSLEDPVILS_ ENSG00000051825|ENST00000606320|MPHOSPH9;nc|ENSG00000051825|Q99550-2|MPHOSPH9 17.11289562659939 0.6791789249425932 3 {[QN]|[E{I|L}]|[KN]}PSV 5 8 17.167 0.0 0.0 1.4479 0.0 0.0 0.0 657.3472799631862 657.3472799631862 4.960762528683702 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[QN]|[E{I|L}]|[KN]}PSV 1.4479 - 363 1 1.601 74398.6 1.0 14510 5861 20358 HBL1_DMSO_200M_050219_1,20373 HBL1_DMSO_200M_050219_1,20373,LTSLEDPVILS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20374 99.112 494.0 383170.0 25 0 42260.0 + -1 EAWPALQI 8 158 927.9619923086474 0 927.9618408083916 PEAK CID FTMS 0 0 0 20358 111451.46875 1.0 0 0.0 16 ENSG00000158526|ENST00000375151|TSR2 3 {I|L}E{I|L}AEW 6 -1 26.904 0.0 0.0 1.4512 0.0 0.0 944.430929342101 165.06736169986564 1109.4982910419667 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 {I|L}E{I|L}AEW 1.4512 - 2404 + 1 1.601 120630.3 1.0 14511 5861 20358 HBL1_DMSO_200M_050219_1,20374 HBL1_DMSO_200M_050219_1,20374, False False EAWPALQI 99.112086 927.961840808392 104092000.0 20358.0 ENSG00000158526|ENST00000375151|TSR2 6.778949896494548 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20375 99.126 800.0 144310.0 25 0 25045.0 43024 VWVPLLVL 8 129 469.8052169140408 937.5958808948816 2 469.8057128787041 MULTI CID FTMS 0 0 0 20358 109112.3828125 1.0 0 0.0 17 Unmodified _VWVPLLVL_ ENST00000526183.5_1_8:145723359-145723767:+|nuORF 24.20995872069341 0.5349487244130675 3 {I|L}{I|L}V{I|L} 4 4 33.532 0.0 0.0 3.5764 0.0 0.0 481.2634144513688 0.0 481.2634144513688 0.0 15.855931671512874 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + {I|L}{I|L}V{I|L} 3.5764 + + 214 1 1.601 91692.4 0.4099999964237213 14512 5861 20358 HBL1_DMSO_200M_050219_1,20375 HBL1_DMSO_200M_050219_1,20375,VWVPLLVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20376 99.132 351.0 115920.0 25 0 2863.1 + -1 MAIAQFCIL 9 83 1082.5351157989478 1081.527839332348 1 1082.194750964642 MULTI CID FTMS 0 0 0 20358 76400.375 0.5391257310318722 8 -0.7429885864257812 18 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))AIAQFC(Carbamidomethyl (C))IL_ REV__ENSG00000136546|ENST00000643258|SCN7A;REV__ENST00000424326.5_1_2:167262092-167297919:-|nuORF 11.640296217721598 0.521594087909532 3 T{I|L} 2 -1 16.454 0.0 0.0 1.5213 0.0 0.0 849.412889549025 0.0 849.412889549025 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L} 1.5213 - 21 1 1.601 31342.0 1.0 14513 5861 20358 HBL1_DMSO_200M_050219_1,20376 HBL1_DMSO_200M_050219_1,20376,MAIAQFCIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20377 99.146 800.0 97097.0 25 0 8251.3 + 45606 YVISAETFTAL 11 119 607.8190819749509 0 607.8186523318291 PEAK CID FTMS 0 0 0 20358 102552.484375 1.0 0 0.0 19 Unmodified _YVISAETFTAL_ ENSG00000116459|ENST00000369722|ATP5PB 20.453626601364224 0.3473659304088168 3 VTD{I|L}{I|L}TV 7 9 40.477 0.0 0.0 3.3352 0.0 0.0 155.9844031083017 313.1881502740844 469.1725533823861 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VTD{I|L}{I|L}TV 3.3352 - 110 + 1 1.601 60212.6 0.4600000083446502 14514 5861 20358 HBL1_DMSO_200M_050219_1,20377 HBL1_DMSO_200M_050219_1,20377,YVISAETFTAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20378 99.161 800.0 130080.0 25 0 5536.1 -1 0 122 1187.5632936779969 0 1187.567187488079 PEAK CID FTMS 0 0 0 20358 127755.5859375 1.0 0 0.0 20 3 {I|L}DPPPPPY 8 -1 30.47 0.0 0.0 1.284 0.0 0.0 1302.5830560065813 191.082818853186 1493.6658748597672 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}DPPPPPY 1.284 - 1441 + 1 1.601 66593.1 0.8199999928474426 14515 5861 20358 HBL1_DMSO_200M_050219_1,20378 HBL1_DMSO_200M_050219_1,20378, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20380 99.166 39.0 1243400.0 25 0 162460.0 + 4026 DALRSILTI 9 81 501.3030275794831 1000.591502225766 2 501.3033935427666 MULTI CID FTMS 0 0 0 20379 917530.8125 0.0067072754432808 15 -1.1911544799804688 1 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 40.23920728925047 0.0741434193262949 3 {[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}{I|L}T{I|L} 9 3 + 59.147 0.0 0.0 5.9112 5.9112 76.24 0.0 0.0 0.0 0.4845500650402812 12.79840696594043 0.4845500650402812 0.4845500650402812 0 0.9247425010840048 1.6989700043360187 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}{I|L}T{I|L};{[DA]|[EG]}[R{I|L}]S{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[KA][DV]{I|L}T{I|L};[{I|L}T]{I|L}N{[NV]|[RG]}[KS]{I|L};{[QN]|[E{I|L}]|[KN]}[KA][VS]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}W[KS]{I|L} 5.9112;5.8627;4.3381;3.7293;3.2367;2.4132 -;+;-;-;-;- + 203 1 1.601 43536.8 1.0 14516 5862 20379 HBL1_DMSO_200M_050219_1,20380 HBL1_DMSO_200M_050219_1,20380,DALRSILTI True True DALRSILTI 99.165876 501.303393542767 7595678208.0 20379.0 ENST00000537638.6_1_12:57905855-57911076:+|nuORF;;ENSG00000166986|ENST00000262027|MARS1 6.103529771169026 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20381 99.167 59.0 1080800.0 25 0 267940.0 + 31501 RQFDVDILI 9 50 559.8135474975962 1117.6125420619924 2 559.8140136599541 MULTI CID FTMS 0 0 0 20379 685747.875 0.5285410141775834 1 -0.0708770751953125 2 Unmodified _RQFDVDILI_ ENSG00000111237|ENST00000549578|VPS29;ENST00000548259.1_1_12:110930799-110939856:-|nuORF;nc|ENSG00000111237|Q9UBQ0-2|VPS29 19.361941925380144 0.3125782356748823 3 DVD{I|L}{I|L}{I|L} 6 3 52.964 0.0 0.0 4.739 0.0 0.0 431.2299977033219 0.0 431.2299977033219 0.0 45.97418457616534 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + DVD{I|L}{I|L}{I|L} 4.739 + + 25 1 1.601 53607.6 1.0 14517 5862 20379 HBL1_DMSO_200M_050219_1,20381 HBL1_DMSO_200M_050219_1,20381,RQFDVDILI False True RQFDVDILI 99.167357 559.814013659954 20395156.0 20379.0 ENST00000548259.1_1_12:110930799-110939856:-|nuORF;;nc|ENSG00000111237|Q9UBQ0-2|VPS29;;ENSG00000111237|ENST00000549578|VPS29 5.842413584391276 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20382 99.169 69.0 1062700.0 25 0 130450.0 + 35605 STYKFFEVI 9 90 567.2979615580348 1132.5813701828697 2 567.2977783083916 MULTI CID FTMS 0 0 0 20379 885382.5 0.1100796756874769 -2 0.235748291015625 3 Unmodified _STYKFFEVI_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 41.8396318013385 0.0653578398400075 3 EKG{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{I|L} 7 5 43.747 0.0 0.0 3.8626 0.0 0.0 294.1364613263688 0.0 294.1364613263688 0.0 25.586229183695647 0.0 0.0 0 0.8182503180159344 0.0 1.0994850021680094 0.0 EKG{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{I|L} 3.8626 - 731 1 1.601 65602.7 1.0 14518 5862 20379 HBL1_DMSO_200M_050219_1,20382 HBL1_DMSO_200M_050219_1,20382,STYKFFEVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20383 99.171 91.0 986930.0 25 0 128460.0 + 34729 SPYPWPLNHI 10 77 612.3142295699773 1222.6139062067546 2 612.3140746951103 MULTI CID FTMS 0 0 0 20379 414024.09375 0.6365912885476166 1 -0.0708770751953125 4 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 74.92900055777586 0.0187778523875693 3 [PS]YPW{I|L}PV[HQ] 10 4 + 71.938 0.0 0.0 5.884 5.884 77.193 0.0 0.0 0.0 19.50557333685196 1.0720996964786875 1.0720996964786875 1.0720996964786875 0 1.110924374808178 1.5228787452803376 0.0 1.3996498648046138 [PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PNH{I|L};[PS]YPWV[{I|L}P][HQ];[PS]YPWV[QP]H{I|L};[PS]YPW{I|L}PGGH{I|L} 5.884;5.7963;4.7981;4.7104;3.9019 -;-;-;-;- 391 + 1 1.601 71473.4 1.0 14519 5862 20379 HBL1_DMSO_200M_050219_1,20383 HBL1_DMSO_200M_050219_1,20383,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20384 99.172 55.0 1819200.0 25 0 241750.0 + 20040 LIPDIDLKL 9 111 520.322988589831 1038.6314242464618 2 520.3162109255791 MULTI CID FTMS 0 0 0 20379 451923.78125 0.1611597690747325 9 -0.7632827758789062 5 Unmodified _LIPDIDLKL_ ENSG00000173473|ENST00000254480|SMARCC1 34.40172386719151 0.1061884637610825 3 {I|L}{I|L}PDD{I|L}{I|L}K{I|L} 9 2 + 39.654 0.0 0.0 3.8179 3.8179 71.576 0.0 0.0 0.0 9.147263454080472 9.97331713462826 9.147263454080472 1.7609125905568064 0 1.4124379954164592 1.5228787452803376 0.0 0.0 {I|L}{I|L}PDD{I|L}{I|L}K{I|L};{I|L}{I|L}PDD{I|L}K{I|L}{I|L};MT{I|L}[{I|L}P]R[VP]{I|L};{I|L}{I|L}[RH]{M(Oxidation (M))|F}{I|L}K{I|L};{I|L}{I|L}[RH]{M(Oxidation (M))|F}K{I|L}{I|L};{I|L}{I|L}P[R{I|L}]T{I|L}[DV];[{I|L}T]{I|L}R[{I|L}P]{I|L}[DV];MT{I|L}[{I|L}P]R{I|L}[VP];{I|L}{I|L}P[MT]R[VP]{I|L};{I|L}{I|L}TR[{I|L}P]{I|L}[DV] 3.8179;3.6483;2.5889;2.4954;2.3258;2.1798;2.1307;2.1295;2.0298;2.0158 -;-;-;-;-;-;-;-;-;- 402 + 1 1.601 84160.1 1.0 14520 5862 20379 HBL1_DMSO_200M_050219_1,20384 HBL1_DMSO_200M_050219_1,20384,LIPDIDLKL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20385 99.174 70.0 1066300.0 25 0 100700.0 + 37242 TILRLLQQV 9 107 542.347695736671 1082.6808385401418 2 542.3482543826103 MULTI CID FTMS 0 0 0 20379 273720.25 0.6982454596357505 -1 0.12890625 6 Unmodified _TILRLLQQV_ ENSG00000107581|ENST00000369144|EIF3A;ENST00000369144.7_1_10:120819204-120820315:-|nuORF;nc|ENSG00000107581|Q14152-2|EIF3A 44.391923383255 0.0526658857881241 3 [{I|L}T]{I|L}R{I|L}{I|L}QQV 9 0 + 61.929 0.0 0.0 5.7199 5.7199 86.823 0.0 0.0 0.0 14.810450018512924 16.478174818886373 14.810450018512924 9.208187539523747 0 1.0044321917401078 2.0 0.0 0.0 + + [{I|L}T]{I|L}R{I|L}{I|L}QQV;[{I|L}T]{I|L}R{I|L}{I|L}Q[AG]V;[{I|L}T]{I|L}R{I|L}{I|L}[AG]QV;{[QV]|[N{I|L}]|[RA]|[KV]}KK{I|L}{I|L}QQV;[AG]VKK{I|L}{I|L}QQV;{[QV]|[N{I|L}]|[RA]|[KV]}KK{I|L}{I|L}Q[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}KK{I|L}{I|L}[AG]QV;[AG]VKK{I|L}{I|L}[AG]QV;[AG]VKK{I|L}{I|L}Q[AG]V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q{I|L}{I|L}[K{I|L}]V 5.7199;4.8694;4.8694;4.352;4.3374;3.5015;3.5015;3.4909;3.4909;3.1649 +;-;-;-;-;-;-;-;-;- + 840 1 1.601 64057.0 1.0 14521 5862 20379 HBL1_DMSO_200M_050219_1,20385 HBL1_DMSO_200M_050219_1,20385,TILRLLQQV True True TILRLLQQV 99.174096 542.34825438261 4667368.5 20379.0 ENST00000369144.7_1_10:120819204-120820315:-|nuORF;;ENSG00000107581|ENST00000369144|EIF3A;;nc|ENSG00000107581|Q14152-2|EIF3A 7.633990446726481 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20386 99.177 173.0 429370.0 25 0 49021.0 + 3379 AYQLMTDVF 9 99 544.2593604870622 1086.5041680409242 2 544.2601806521416 MULTI CID FTMS 0 0 0 20379 254554.046875 1.0 0 0.0 7 Unmodified _AYQLMTDVF_ ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2;nc|ENSG00000055917|Q8TB72|PUM2 23.1484247019978 0.2366544122328345 3 [WR]MYWV{M(Oxidation (M))|F} 7 6 + 38.716 0.0 0.0 3.5634 3.5634 77.73 0.0 0.0 0.0 0.5799194697768684 6.989700043360188 0.5799194697768684 6.989700043360188 0 0.0 0.0 0.0 0.0 [WR]MYWV{M(Oxidation (M))|F};[WR]MYW{M(Oxidation (M))|F}V;[DV][HV]YM{I|L}[NP];[DV]W{[NV]|[RG]}M{I|L}[NP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]YY{I|L}[NP];{[QN]|[E{I|L}]|[KN]}[HA]YM{I|L}[NP];{[QN]|[E{I|L}]|[KN]}{I|L}EEM{I|L}[NP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[EP]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[NP];[DV]T[QT]{[CP]|[EA]}{I|L}[NP];{[ES]|[DT]|[{I|L}C]}M{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[NP] 3.5634;2.92;2.7037;2.6145;2.52;2.3116;2.3116;2.1478;1.8562;1.8327 -;-;-;-;-;-;-;-;-;- 403 + 1 1.601 65969.1 1.0 14522 5862 20379 HBL1_DMSO_200M_050219_1,20386 HBL1_DMSO_200M_050219_1,20386,AYQLMTDVF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20387 99.183 284.0 409600.0 25 0 49011.0 + 6651 EAWPALQI 8 119 464.2505241855204 926.4864954378407 2 464.2505676150322 MULTI CID FTMS 0 0 0 20379 192807.96875 0.1356550176210555 -3 0.3487548828125 8 Unmodified _EAWPALQI_ ENSG00000158526|ENST00000375151|TSR2 81.86404211737425 0.0837039284849515 3 [PA]WEA{I|L}Q{I|L} 8 2 + 41.944 0.0 0.0 4.5272 4.5272 73.721 0.0 0.0 0.0 5.114393726401687 9.731975075880328 5.114393726401687 1.7609125905568137 0 0.5994850021680094 0.8860566476931632 0.8494850021680094 0.0 [PA]WEA{I|L}Q{I|L};[PA]EWA{I|L}Q{I|L};{[CP]|[EA]}WPA{I|L}Q{I|L};[PA]EAW{I|L}Q{I|L};[PA]{I|L}EAWQ{I|L};[VP][CS]PA{I|L}Q{I|L};{[CP]|[EA]}PWA{I|L}Q{I|L};[PA]E{I|L}AWQ{I|L};[PG][MT]PA{I|L}Q{I|L};[PA]EA{I|L}WQ{I|L} 4.5272;4.3371;3.9752;3.5538;3.2302;3.1535;2.9633;2.9053;2.7056;2.5804 -;-;+;-;-;-;-;-;-;- + 322 1 1.601 92017.1 1.0 14523 5862 20379 HBL1_DMSO_200M_050219_1,20387 HBL1_DMSO_200M_050219_1,20387,EAWPALQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20388 99.187 222.0 486180.0 25 0 57126.0 + 31098 RLLESLDQLEL 11 87 664.8743526406378 1327.7341523480754 2 664.8749877810478 MULTI CID FTMS 0 0 0 20379 190949.859375 0.7045714038627847 -1 0.12890625 9 Unmodified _RLLESLDQLEL_ ENSG00000112208|ENST00000370693|BAG2 55.24861242081279 0.0885632729458983 3 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}DQ{I|L}E{I|L} 11 2 + 97.202 0.0 0.0 7.3209 7.3209 90.247 0.0 0.0 0.0 8.396329588770172 16.575773191777927 8.396329588770172 8.396329588770172 0 1.2302046884880935 1.2218487496163564 1.0387254899964358 0.7302046884880937 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}DQ{I|L}E{I|L};[R{I|L}]{I|L}ES{I|L}DQ{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}D[AG]{I|L}E{I|L};[R{I|L}]{I|L}ES{I|L}D[AG]{I|L}E{I|L} 7.3209;6.6885;6.6334;6.001 -;+;-;- + 304 1 1.601 90591.2 1.0 14524 5862 20379 HBL1_DMSO_200M_050219_1,20388 HBL1_DMSO_200M_050219_1,20388,RLLESLDQLEL True True RLLESLDQLEL 99.186892 664.874987781048 5868205.0 20379.0 ENSG00000112208|ENST00000370693|BAG2 6.032352765401204 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20389 99.201 800.0 198730.0 25 0 12427.0 + 17113 KLFPGFEIETV 11 159 640.3503518914645 1278.6861508497288 2 640.3506957888603 MULTI CID FTMS 0 0 0 20379 170821.046875 0.5349754247561829 1 -0.0708770751953125 10 Unmodified _KLFPGFEIETV_ ENSG00000070669|ENST00000394308|ASNS;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS 103.82355648334676 0.0046447410502644 3 [DP]{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV 11 6 + 91.737 0.0 0.0 7.1743 7.1743 85.53 0.0 0.0 0.0 3.839366626548184 15.070623213458036 3.839366626548184 3.839366626548184 0 1.0 0.8860566476931632 3.423877368056628 0.0 [DP]{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;[VP]EA{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;[VP]S{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}K{I|L}ETV;[PG]{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}K{I|L}ETV;{[QN]|[E{I|L}]|[KN]}[PG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;[VP]S{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}K{I|L}ETV;[PG]{M(Oxidation (M))|F}E{M(Oxidation (M))|F}{I|L}K{I|L}ETV;[DP]{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}KE{I|L}TV;[{I|L}P]DA{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GE{I|L}{M(Oxidation (M))|F}K{I|L}ETV 7.1743;6.874;6.8338;6.6352;6.6338;6.5698;6.3712;6.3543;6.302;6.2855 -;-;-;-;-;-;-;-;-;- 10055 1 1.601 127678.4 0.6700000166893005 14525 5862 20379 HBL1_DMSO_200M_050219_1,20389 HBL1_DMSO_200M_050219_1,20389,KLFPGFEIETV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20390 99.206 311.0 420380.0 25 0 64334.0 + 4044 DALSNFHFI 9 127 532.264091681388 1062.513630429576 2 532.2639037966728 MULTI CID FTMS 0 0 0 20379 167334.1875 0.2753788308130059 -2 0.235748291015625 11 Unmodified _DALSNFHFI_ ENSG00000124383|ENST00000244230|MPHOSPH10 54.773552608820026 0.0299037012502309 3 {[DA]|[EG]}{I|L}SN{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L} 9 0 + 66.04 0.0 0.0 6.2155 6.2155 88.439 0.0 0.0 0.0 9.476533139750316 9.476533139750316 9.476533139750316 9.208187539523747 0 0.805462187404089 2.0 0.805462187404089 0.0 + + {[DA]|[EG]}{I|L}SN{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{I|L}SGG{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{I|L}W;{[DA]|[EG]}{I|L}{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}{I|L}W;{[{M(Oxidation (M))|F}H]|[RQ]}NS{M(Oxidation (M))|F}{I|L}{I|L}{[DA]|[EG]};{[DA]|[EG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}{I|L}W;{[DA]|[EG]}{I|L}[EC][RP]{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}NS{I|L}{M(Oxidation (M))|F}{I|L}{[DA]|[EG]};{[DA]|[EG]}{I|L}[EC][W{I|L}]T{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}GGS{M(Oxidation (M))|F}{I|L}{I|L}{[DA]|[EG]} 6.2155;5.3488;5.3236;4.7569;4.7328;4.6911;4.2683;4.1662;3.9418;3.8662 +;-;-;-;-;-;-;-;-;- + 715 + 1 1.601 105077.7 1.0 14526 5862 20379 HBL1_DMSO_200M_050219_1,20390 HBL1_DMSO_200M_050219_1,20390,DALSNFHFI True True DALSNFHFI 99.206407 532.2651 5028452.5 20379.0 ENSG00000124383|ENST00000244230|MPHOSPH10 6.205234845479329 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20391 99.211 218.0 228910.0 25 0 20268.0 + 2451 AQVEEIWSL 9 89 537.777753132105 1073.54095333101 2 537.7778198122978 MULTI CID FTMS 0 0 0 20379 130933.6875 0.6652212897650978 -2 0.235748291015625 12 Unmodified _AQVEEIWSL_ ENSG00000116750|ENST00000367454|UCHL5;nc|ENSG00000116750|Q9Y5K5-2|UCHL5;nc|ENSG00000116750|Q9Y5K5-4|UCHL5;nc|ENSG00000116750|Q9Y5K5|UCHL5 29.081581746732265 0.1611639662936252 3 {NN|[MP]|[D{I|L}]|[EV]}E[QA]{I|L}WS{I|L} 9 4 {NN|[MP]|[D{I|L}]|[EV]}E[QA]{I|L} + + 29.737 17.235 2.575 2.77 2.77 49.759 0.0 0.0 0.0 0.0 19.82222621845901 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}E[QA]{I|L}WS{I|L} 2.77 - 225 + 1 1.601 42837.6 1.0 14527 5862 20379 HBL1_DMSO_200M_050219_1,20391 HBL1_DMSO_200M_050219_1,20391,AQVEEIWSL False True AQVEEIWSL 99.210538 537.777819812298 2219364.0 20379.0 ENSG00000116750|ENST00000367454|UCHL5;;nc|ENSG00000116750|Q9Y5K5|UCHL5;;nc|ENSG00000116750|Q9Y5K5-2|UCHL5;;nc|ENSG00000116750|Q9Y5K5-4|UCHL5 2.5916337966918945 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20392 99.224 800.0 155270.0 25 0 17482.0 + 33482 SIIEAHCDNVT 11 162 601.2770477783645 1200.5395426235289 2 601.2781860232353 MULTI CID FTMS 0 0 0 20379 100886.71875 0.0404193341830924 14 -1.0967559814453125 13 Unmodified _SIIEAHCDNVT_ REV__ENSG00000160710|ENST00000368474|ADAR;REV__nc|ENSG00000160710|P55265-2|ADAR;REV__nc|ENSG00000160710|P55265-3|ADAR;REV__nc|ENSG00000160710|P55265-4|ADAR;REV__nc|ENSG00000160710|P55265-5|ADAR 19.361941925380144 0.6323962752489956 3 {[TV]|[{I|L}S]}{I|L}E 4 -1 32.252 0.0 0.0 2.6864 0.0 0.0 0.0 755.2749911921413 755.2749911921413 9.240013195186409 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.5283773187068795 0.0 {[TV]|[{I|L}S]}{I|L}E 2.6864 + + 443 1 1.601 87703.6 0.5099999904632568 14528 5862 20379 HBL1_DMSO_200M_050219_1,20392 HBL1_DMSO_200M_050219_1,20392,SIIEAHCDNVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20393 99.232 360.0 181160.0 25 0 23029.0 + 44393 YLVNDIYEL 9 102 571.2915174831661 1140.568482033132 2 571.2934448122978 MULTI CID FTMS 0 0 0 20379 98426.234375 0.518951433355508 6 -0.559173583984375 14 Unmodified _YLVNDIYEL_ ENSG00000111300|ENST00000261745|NAA25;ENST00000552527.5_1_12:112478245-112546577:-|nuORF;nc|ENSG00000111300|Q14CX7-2|NAA25 20.41453444215458 0.284085796332423 3 [Y{I|L}]DNV{I|L} 6 5 40.45 0.0 0.0 3.5465 0.0 0.0 0.0 420.1734984728384 420.1734984728384 22.378428407800325 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.805462187404089 [Y{I|L}]DNV{I|L} 3.5465 - 373 1 1.601 55420.4 1.0 14529 5862 20379 HBL1_DMSO_200M_050219_1,20393 HBL1_DMSO_200M_050219_1,20393,YLVNDIYEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20395 99.237 38.0 2824100.0 25 0 263160.0 -1 0 93 917.095871020223 2748.2657836608687 3 917.4316284060478 MULTI CID FTMS 0 0 0 20394 2553289.25 0.3437653906108421 4 -0.415313720703125 1 3 [YQ]{I|L}ENY 6 -1 61.63 0.0 0.0 2.2425 0.0 0.0 0.0 1934.888886961388 1934.888886961388 0.5495374279561105 0.0 0.0 0.0 0 1.25 1.2218487496163564 0.0 0.8494850021680094 [YQ]{I|L}ENY 2.2425 - 539 + 1 1.612 82092.6 1.0 14530 5863 20394 HBL1_DMSO_200M_050219_1,20395 HBL1_DMSO_200M_050219_1,20395, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20396 99.238 45.0 2067400.0 25 0 183360.0 -1 0 80 688.0735427739423 2748.265065229369 4 688.3254272341728 MULTI CID FTMS 0 0 0 20394 1858164.5 0.32322655566841 4 -0.415313720703125 2 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 64.976 0.0 0.0 2.3642 0.0 0.0 0.0 1707.6480044589562 1707.6480044589562 28.48146743259124 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.2887254899964357 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.3642 - 1696 1 1.612 76560.1 1.0 14531 5863 20394 HBL1_DMSO_200M_050219_1,20396 HBL1_DMSO_200M_050219_1,20396, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20397 99.24 50.0 1283700.0 25 0 179700.0 + 15298 IPISNILMV 9 91 508.29634384823146 1014.5781347632628 2 508.2967712283134 MULTI CID FTMS 0 0 0 20394 1063067.875 0.5269472894896652 2 -0.2734146118164062 3 Oxidation (M) _IPISNILM(Oxidation (M))V_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 57.47134341890925 0.0274820932774257 3 [{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V 9 2 + 75.925 0.0 0.0 7.4834 7.4834 87.089 0.0 0.0 0.0 4.436974992327123 3.480137174129325 3.480137174129325 4.436974992327123 0 1.1989700043360187 1.6989700043360187 0.75 1.0114393726401687 [{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}NP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}N{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}{I|L}NP{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}PN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[NS]{I|L}P{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[NS]{I|L}{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]SGG{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}GG{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}GGP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V 7.4834;7.0461;6.7689;6.2987;6.2791;6.0197;5.7425;5.5789;5.1655;5.1416 -;-;-;-;-;-;-;-;-;- 547 1 1.612 56647.1 1.0 14532 5863 20394 HBL1_DMSO_200M_050219_1,20397 HBL1_DMSO_200M_050219_1,20397,IPISNILMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20398 99.241 78.0 829060.0 25 0 152990.0 + 41435 VPLIIVNSI 9 98 484.3128750467578 966.6111971603156 2 484.3132812380791 MULTI CID FTMS 0 0 0 20394 380256.65625 0.2714403567102861 2 -0.2734146118164062 4 Unmodified _VPLIIVNSI_ ENSG00000134049|ENST00000256433|IER3IP1 42.96799951952854 0.0591636306142405 3 [{I|L}P]{I|L}{I|L}VVNTV 9 4 + 52.246 0.0 0.0 5.4051 5.4051 78.739 0.0 0.0 0.0 9.542425094393252 17.88750309660614 9.542425094393252 3.0102999566398125 0 0.5924778212679485 1.0457574905606752 0.0 0.0 [{I|L}P]{I|L}{I|L}VVNTV;[{I|L}P]{I|L}V{I|L}VNTV;[{I|L}P]V{I|L}{I|L}VNTV;{I|L}{I|L}P{I|L}VVNTV;{I|L}{I|L}PV{I|L}VNTV;[VP]{I|L}{I|L}{I|L}VNTV;[{I|L}V]P{I|L}{I|L}VNTV 5.4051;5.0936;4.7822;4.4179;4.1064;3.9298;2.6658 -;-;-;-;-;-;- 461 1 1.612 56735.7 1.0 14533 5863 20394 HBL1_DMSO_200M_050219_1,20398 HBL1_DMSO_200M_050219_1,20398,VPLIIVNSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20399 99.245 215.0 253180.0 25 0 38505.0 + 30278 QYPENILSF 9 70 555.7768449651408 1109.5391369970814 2 555.7773315310478 MULTI CID FTMS 0 0 0 20394 186923.46875 0.9584190826558308 -1 0.0708770751953125 5 Unmodified _QYPENILSF_ ENSG00000189362|ENST00000409150|NEMP2;nc|ENSG00000189362|A6NFY4-2|NEMP2 42.09456458481378 0.0639583784996157 3 {[TV]|[{I|L}S]}[QP]CC{I|L}{I|L}S{M(Oxidation (M))|F} 10 5 {[TV]|[{I|L}S]}[QP]CC{I|L}{I|L} + + 23.469 25.455 2.9688 2.1152 2.1152 48.935 0.0 0.0 0.0 0.0 -9.256368635175605 -9.256368635175605 0.0 0 0.0 0.0 0.25 0.0 {[TV]|[{I|L}S]}[QP]CC{I|L}{I|L}S{M(Oxidation (M))|F} 2.1152 - 151 + 1 1.612 49249.2 1.0 14534 5863 20394 HBL1_DMSO_200M_050219_1,20399 HBL1_DMSO_200M_050219_1,20399,QYPENILSF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20400 99.252 386.0 259250.0 25 0 25597.0 + 36553 TALAQIMTI 9 126 481.27278142206296 960.531009910926 2 481.2729064822197 MULTI CID FTMS 0 0 0 20394 181682.890625 0.054822343378002 6 -0.5432052612304688 6 Unmodified _TALAQIMTI_ ENSG00000097046|ENST00000234626|CDC7 78.14939416004806 0.0179651292570206 3 [TA]{I|L}AQ{I|L} 6 3 49.808 0.0 0.0 5.1854 0.0 0.0 0.0 360.1584872881322 360.1584872881322 10.518387908317235 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 1.0844995301525209 0.3054621874040891 + [TA]{I|L}AQ{I|L} 5.1854 + + 1176 1 1.612 80632.1 1.0 14535 5863 20394 HBL1_DMSO_200M_050219_1,20400 HBL1_DMSO_200M_050219_1,20400,TALAQIMTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20401 99.26 426.0 329510.0 25 0 24586.0 + 30866 RIMNLTVML 9 128 545.8103470442084 0 545.8104736208916 PEAK CID FTMS 0 0 0 20394 172637.984375 1.0 0 0.0 7 Unmodified _RIMNLTVML_ ENSG00000120526|ENST00000239690|NUDCD1;nc|ENSG00000120526|Q96RS6-2|NUDCD1 39.94969957227396 0.061964645358372 3 MVT{I|L}N[DV]T 8 7 46.935 0.0 0.0 4.3075 0.0 0.0 131.0922994577541 82.06697260074452 213.15927205849863 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 1.0114393726401687 0.2887254899964357 MVT{I|L}N[DV]T 4.3075 - 587 + 1 1.612 113614.6 1.0 14536 5863 20394 HBL1_DMSO_200M_050219_1,20401 HBL1_DMSO_200M_050219_1,20401,RIMNLTVML True True RIMNLTVML 99.259925 545.810473620892 1345753.75 20394.0 nc|ENSG00000120526|Q96RS6-2|NUDCD1;;ENSG00000120526|ENST00000239690|NUDCD1 5.880948702494304 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20402 99.27 556.0 292890.0 25 0 23416.0 + 27422 PIPTSEPPLLE 11 138 596.8262395194272 1191.6379261056543 2 596.8266479372978 MULTI CID FTMS 0 0 0 20394 143398.03125 0.5928815254298605 -1 0.0708770751953125 8 Unmodified _PIPTSEPPLLE_ REV__ENSG00000114867|ENST00000346169|EIF4G1;REV__ENST00000442406.5_1_3:184038690-184052693:+|nuORF;REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000114867|Q04637-4|EIF4G1;REV__nc|ENSG00000114867|Q04637-5|EIF4G1;REV__nc|ENSG00000114867|Q04637-6|EIF4G1;REV__nc|ENSG00000114867|Q04637-7|EIF4G1;REV__nc|ENSG00000114867|Q04637-8|EIF4G1;REV__nc|ENSG00000114867|Q04637-9|EIF4G1 34.40172386719151 0.2986346176549658 3 {[QN]|[E{I|L}]|[KN]}PDPP{I|L}E 8 -1 41.697 0.0 0.0 3.4992 0.0 0.0 0.0 298.1764148240621 298.1764148240621 19.487259318411333 0.0 0.0 0.0 0 0.0 0.744727494896694 0.2134679910804404 0.0 {[QN]|[E{I|L}]|[KN]}PDPP{I|L}E 3.4992 - 1425 1 1.612 123825.0 1.0 14537 5863 20394 HBL1_DMSO_200M_050219_1,20402 HBL1_DMSO_200M_050219_1,20402,PIPTSEPPLLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20403 99.284 800.0 194860.0 25 0 7276.9 + 40020 VGEVLNIL 8 136 856.5144553810788 855.5071789144788 1 858.5205566287041 MULTI CID FTMS 0 0 0 20394 140009.40625 0.0981845795172851 6 -0.5432052612304688 9 Unmodified _VGEVLNIL_ ENSG00000140798|ENST00000311303|ABCC12;nc|ENSG00000140798|Q96J65-2|ABCC12;nc|ENSG00000140798|Q96J65-3|ABCC12;nc|ENSG00000140798|Q96J65-4|ABCC12;nc|ENSG00000140798|Q96J65|ABCC12 16.942295170755138 0.6606234159769251 3 {[QV]|[N{I|L}]|[RA]|[KV]}[TA]E{I|L}VP 8 7 + 32.221 0.0 0.0 3.7663 3.7663 68.788 0.0 0.0 0.0 6.31691345950685 7.078343878162343 6.31691345950685 0.1726555193830847 0 0.0 1.154901959985743 1.110924374808178 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[TA]E{I|L}VP;{[QV]|[N{I|L}]|[RA]|[KV]}[TA]EV{I|L}P;{[QV]|[N{I|L}]|[RA]|[KV]}[TA]VE{I|L}P;{[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}{I|L}E{I|L}P;{[QV]|[N{I|L}]|[RA]|[KV]}V[TA]E{I|L}P;{[QV]|[N{I|L}]|[RA]|[KV]}VMAV{I|L}P;{[QV]|[N{I|L}]|[RA]|[KV]}VMA{I|L}VP;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MG]|[TS]}{I|L}VP;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MG]|[TS]}V{I|L}P;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[SA]|[TG]}E{I|L}P 3.7663;3.7461;3.653;3.5403;3.3011;2.9081;2.8403;2.6509;2.6307;2.5376 -;-;-;-;-;-;-;-;-;- 3794 1 1.612 111256.5 0.6600000262260437 14538 5863 20394 HBL1_DMSO_200M_050219_1,20403 HBL1_DMSO_200M_050219_1,20403,VGEVLNIL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20404 99.292 451.0 154640.0 25 0 6217.4 -1 0 115 951.9673594349216 1901.9201659366431 2 951.9655029177666 MULTI CID FTMS 0 0 0 20394 139840.265625 0.8409920645958139 3 -0.3827667236328125 10 3 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}T 6 -1 34.905 0.0 0.0 1.8352 0.0 0.0 0.0 1246.541173587287 1246.541173587287 14.93932411119851 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.4247425010840047 1.0356668758921828 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}T 1.8352 - 868 1 1.612 50503.5 1.0 14539 5863 20394 HBL1_DMSO_200M_050219_1,20404 HBL1_DMSO_200M_050219_1,20404, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20405 99.301 534.0 149220.0 25 0 13035.0 23024 LSKFLDAQYF 10 106 616.323641405626 1230.6327298780518 2 616.8259155154228 MULTI CID FTMS 0 0 0 20394 121881.8515625 0.3771840874012123 2 -0.2734146118164062 11 Unmodified _LSKFLDAQYF_ ENST00000534096.5_1_19:50838046-50848012:-|nuORF;ENST00000534789.5_1_19:50838228-50848012:-|nuORF 12.240655878213236 0.6421556946785427 3 {[TV]|[{I|L}S]}V 3 8 23.514 0.0 0.0 1.9107 0.0 0.0 0.0 928.4246359661956 928.4246359661956 7.31604776591783 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.1462566630072955 0.0 {[TV]|[{I|L}S]}V 1.9107 - 943 1 1.612 65198.0 1.0 14540 5863 20394 HBL1_DMSO_200M_050219_1,20405 HBL1_DMSO_200M_050219_1,20405,LSKFLDAQYF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20406 99.31 486.0 115260.0 25 0 4454.0 -1 0 78 799.6372437539173 3194.519869149269 4 800.1401855349541 MULTI CID FTMS 0 0 0 20394 109342.296875 0.1788649973059986 6 -0.5432052612304688 12 3 [H{I|L}]V{[CP]|[EA]}{I|L}Y{I|L} 8 -1 32.396 0.0 0.0 1.0141 0.0 0.0 0.0 2252.974577273299 2252.974577273299 24.32380653375944 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [H{I|L}]V{[CP]|[EA]}{I|L}Y{I|L} 1.0141 - 49 1 1.612 46318.8 1.0 14541 5863 20394 HBL1_DMSO_200M_050219_1,20406 HBL1_DMSO_200M_050219_1,20406, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20407 99.321 586.0 128050.0 25 0 4519.7 + + -1 IPFSVVGSNQLI 12 130 637.3609347391687 1272.7073165451372 2 637.3611328005791 MULTI CID FTMS 0 0 0 20394 108354.3828125 0.4382404495675754 2 -0.2734146118164062 13 Carbamidomethyl (C) _LLSQVLC(Carbamidomethyl (C))SQII_ nc|ENSG00000168385|Q15019-2|SEPTIN2;ENSG00000168385|ENST00000391971|SEPTIN2;ENST00000481500.1_1_2:242277175-242285749:+|nuORF;nc|ENSG00000168385|Q15019-3|SEPTIN2 36.12702656103203 0.2720571796884491 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV{I|L}VGSNQ{I|L}{I|L} 12 -1 + 79.892 0.0 0.0 6.2773 6.2773 76.771 0.0 0.0 0.0 0.1551216617824877 7.447274948966935 0.1551216617824877 0.1551216617824877 0 0.5 0.958607314841775 2.3723637474483468 0.7302046884880937 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV{I|L}VGSNQ{I|L}{I|L};{[TV]|[{I|L}S]}MV{I|L}VGSNQ{I|L}{I|L};[{I|L}T]{[ES]|[DT]|[{I|L}C]}{I|L}VGSNQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SVV{I|L}GSNQ{I|L}{I|L};{[TV]|[{I|L}S]}MVV{I|L}GSNQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L}VVGSNQ{I|L}{I|L};{[TV]|[{I|L}S]}M{I|L}VVGSNQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV{I|L}VGSN[AG]{I|L}{I|L};{[TV]|[{I|L}S]}MV{I|L}VGSN[AG]{I|L}{I|L};[{I|L}P][YG]{I|L}VGSNQ{I|L}{I|L} 6.2773;6.2651;5.8092;5.7416;5.7295;5.6344;5.6222;5.5624;5.5502;5.5227 -;-;-;-;-;-;-;-;-;- 4886 1 1.612 68121.8 1.0 14542 5863 20394 HBL1_DMSO_200M_050219_1,20407 HBL1_DMSO_200M_050219_1,20407,LLSQVLCSQII False False IPFSVVGSNQLI 99.321283 637.361132800579 5523908.5 20394.0 nc|ENSG00000168385|Q15019-2|SEPTIN2;;ENSG00000168385|ENST00000391971|SEPTIN2;;ENST00000481500.1_1_2:242277175-242285749:+|nuORF;;nc|ENSG00000168385|Q15019-3|SEPTIN2 4.866396268208821 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20408 99.335 800.0 226920.0 25 0 45135.0 + 35129 SQYPFPVTL 9 182 526.2768031737937 1050.5390534143874 2 526.2770873904228 MULTI CID FTMS 0 0 0 20394 107763.1484375 0.0774942520123799 7 -0.581146240234375 14 Unmodified _SQYPFPVTL_ ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-2|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L 40.23920728925047 0.0741434193262949 3 {[QS]|[NT]}Y{M(Oxidation (M))|F}PPV[{I|L}T] 9 2 + 37.189 0.0 0.0 3.54 3.54 72.452 0.0 0.0 0.0 4.9048787919051975 13.773043837969333 4.9048787919051975 2.7815125038364386 0 1.0 0.0 0.086696871556164 0.9489700043360187 {[QS]|[NT]}Y{M(Oxidation (M))|F}PPV[{I|L}T];{[QS]|[NT]}YP{M(Oxidation (M))|F}PV[{I|L}T];[AG]SYP{M(Oxidation (M))|F}PV[{I|L}T];[AG]SY{M(Oxidation (M))|F}PPV[{I|L}T];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{[QS]|[NT]}PV[{I|L}T];[{I|L}T][{I|L}T][C(Carbamidomethyl (C))M]V[{I|L}T];{[SA]|[TG]}GYP{M(Oxidation (M))|F}PV[{I|L}T];{[SA]|[TG]}GY{M(Oxidation (M))|F}PPV[{I|L}T];{[QS]|[NT]}[HQ]AAPV[{I|L}T];[VP]TN[VG][HN][{I|L}T] 3.54;3.2753;2.7865;2.5754;2.5067;2.2116;2.0119;1.8007;0.97581;0.88814 -;+;-;-;-;-;-;-;-;- + 968 1 1.612 145264.6 0.4900000095367431 14543 5863 20394 HBL1_DMSO_200M_050219_1,20408 HBL1_DMSO_200M_050219_1,20408,SQYPFPVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20409 99.349 800.0 107010.0 25 0 4340.1 -1 0 119 777.0571038037169 2328.1494820113508 3 777.3941528201103 MULTI CID FTMS 0 0 0 20394 95558.90625 0.9976143462207574 1 -0.1457748413085937 15 3 {[TV]|[{I|L}S]}[DN]TV{M(Oxidation (M))|F}VYY{I|L}DE 13 -1 68.015 0.0 0.0 2.9214 0.0 0.0 0.0 766.4547547987132 766.4547547987132 30.79052360526252 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.5356668758921828 0.0 {[TV]|[{I|L}S]}[DN]TV{M(Oxidation (M))|F}VYY{I|L}DE 2.9214 - 25570 1 1.612 75488.1 0.5699999928474426 14544 5863 20394 HBL1_DMSO_200M_050219_1,20409 HBL1_DMSO_200M_050219_1,20409, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20410 99.364 800.0 64634.0 25 0 8019.8 -1 0 84 1095.196459949017 0 1095.196459949017 PEAK CID FTMS 0 0 0 -1 0 16 3 {M(Oxidation (M))|F}VC(Carbamidomethyl (C))D 4 -1 8.3919 0.0 0.0 0.38347 0.0 0.0 1210.9804920642466 453.1833590143188 1664.1638510785654 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}VC(Carbamidomethyl (C))D 0.38347 - 73 + 1 1.612 41287.8 0.6600000262260437 14545 5863 20394 HBL1_DMSO_200M_050219_1,20410 HBL1_DMSO_200M_050219_1,20410, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20411 99.378 800.0 73382.0 25 0 2831.1 -1 0 87 774.3750204443423 3093.470975910969 4 774.8752319216728 MULTI CID FTMS 0 0 0 20394 82300.0234375 0.2617283817496581 4 -0.415313720703125 17 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 54.157 0.0 0.0 1.7507 0.0 0.0 0.0 2151.924462389289 2151.924462389289 27.985775332874283 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.7507 - 394 1 1.612 48882.0 0.5199999809265137 14546 5863 20394 HBL1_DMSO_200M_050219_1,20411 HBL1_DMSO_200M_050219_1,20411, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20413 99.384 109.0 737310.0 25 0 143290.0 + 35876 SVLNVLHSL 9 96 491.2899217556439 980.5652905780878 2 491.2902404665947 MULTI CID FTMS 0 0 0 20412 567962.8125 0.1421712695229985 3 -0.2695388793945312 1 Unmodified _SVLNVLHSL_ ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L 74.92900055777586 0.0191935851694334 3 [VS]{I|L}NV{I|L}HS{I|L} 9 0 + 77.419 0.0 0.0 7.8953 7.8953 89.211 0.0 0.0 0.0 22.38055167814742 5.555394846011339 5.555394846011339 5.555394846011339 0 0.7742275032520141 2.0 1.174742501084005 0.3807196863200844 + + [VS]{I|L}NV{I|L}HS{I|L};[VS]{I|L}NV{I|L}{I|L}[HS];[VS]{I|L}GGV{I|L}HS{I|L};[VS]{I|L}GGV{I|L}{I|L}[HS];{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{I|L}VN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VGG{I|L}[PA];{[VA]|[{I|L}G]}GQ{I|L}VN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}QN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}VAAVN{I|L}[PA] 7.8953;7.3288;6.568;6.0015;5.6129;4.6739;4.6739;4.6657;4.5124;4.1873 +;-;-;-;-;-;-;-;-;- + 764 + 1 1.621 67714.0 1.0 14547 5864 20412 HBL1_DMSO_200M_050219_1,20413 HBL1_DMSO_200M_050219_1,20413,SVLNVLHSL True True SVLNVLHSL 99.383914 491.290240466595 86366046.0 20412.0 nc|ENSG00000100129|Q9Y262-2|EIF3L;;ENSG00000100129|ENST00000652021|EIF3L 6.419604778289795 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20414 99.398 800.0 212260.0 25 0 12560.0 + 15185 IPEDILGEIAV 11 153 584.8268733841663 1167.6391938351326 2 584.8270141482353 MULTI CID FTMS 0 0 0 20412 165510.859375 0.5131452880008518 1 -0.1276397705078125 2 Unmodified _IPEDILGEIAV_ ENSG00000034152|ENST00000342679|MAP2K3;nc|ENSG00000034152|P46734-2|MAP2K3;nc|ENSG00000034152|P46734-3|MAP2K3 41.8396318013385 0.1840573104808743 3 {[QN]|[E{I|L}]|[KN]}DP{I|L}{I|L}EAVAV 11 5 + 80.613 0.0 0.0 6.9039 6.9039 82.489 0.0 0.0 0.0 2.79264865647906 36.1786416937058 2.79264865647906 2.4250919415563885 0 0.8182503180159344 1.0457574905606752 1.5431576817365436 0.0 {[QN]|[E{I|L}]|[KN]}DP{I|L}{I|L}EAVAV;{[QN]|[E{I|L}]|[KN]}DP{I|L}EA{I|L}VAV;{[QN]|[E{I|L}]|[KN]}DP{I|L}E{I|L}AVAV;{[QN]|[E{I|L}]|[KN]}DP{I|L}AE{I|L}VAV;{[QN]|[E{I|L}]|[KN]}DP{I|L}{I|L}AEVAV;[DP]E{I|L}{I|L}{I|L}EAVAV;{NN|[MP]|[D{I|L}]|[EV]}PE{I|L}{I|L}EAVAV;[DP]E{I|L}{I|L}E{I|L}AVAV;{NN|[MP]|[D{I|L}]|[EV]}EP{I|L}{I|L}EAVAV;{[QN]|[E{I|L}]|[KN]}DP{I|L}{I|L}AVEAV 6.9039;6.6962;6.6898;6.4177;6.2337;6.2164;6.0218;6.0023;5.8967;5.8251 -;-;-;-;-;-;-;-;-;- 10285 1 1.621 131154.8 1.0 14548 5864 20412 HBL1_DMSO_200M_050219_1,20414 HBL1_DMSO_200M_050219_1,20414,IPEDILGEIAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20415 99.4 89.0 1168900.0 25 0 363200.0 24180 LYYLVFTL 8 86 516.2919191810124 1030.5692854288247 2 516.2928344607353 MULTI CID FTMS 0 0 0 20412 368693.21875 0.7417193766686541 -1 0.1457748413085937 3 Unmodified _LYYLVFTL_ ENSG00000007541|ENST00000321878|PIGQ;ENST00000480424.6_1_16:629069-630269:+|nuORF;nc|ENSG00000007541|Q9BRB3|PIGQ 38.99230528602208 0.2511498934509823 3 [Y{I|L}]Y{M(Oxidation (M))|F}{I|L} 5 3 34.437 0.0 0.0 3.3415 0.0 0.0 0.0 328.18626321048106 328.18626321048106 10.33809673312028 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [Y{I|L}]Y{M(Oxidation (M))|F}{I|L} 3.3415 - 365 1 1.621 84513.9 1.0 14549 5864 20412 HBL1_DMSO_200M_050219_1,20415 HBL1_DMSO_200M_050219_1,20415,LYYLVFTL False True FPNVEIVTI 99.399728 516.292834460735 13602195.0 20412.0 ENSG00000183337|ENST00000378444|BCOR;;nc|ENSG00000183337|Q6W2J9-2|BCOR;;nc|ENSG00000183337|Q6W2J9-4|BCOR;;ENST00000442018.5_2_X:39911364-39913101:-|nuORF 1.697374701499939 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20416 99.403 143.0 927020.0 25 0 110320.0 + 1812 ALTELLAKI 9 118 486.3103788438592 970.6062047545184 2 486.3106872439384 MULTI CID FTMS 0 0 0 20412 345550.0 0.0101504063746255 -3 0.3455581665039062 4 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 71.92227651296345 0.0203558744033348 3 [{I|L}A]TE{I|L}K{I|L}{I|L}A 9 4 + 70.601 0.0 0.0 7.2739 7.2739 93.548 0.0 0.0 0.0 11.368092566599016 34.61471495779499 11.368092566599016 14.13756432606572 0 2.0 2.0 1.1549471895720984 0.0 [{I|L}A]TE{I|L}K{I|L}{I|L}A;[{I|L}A]ET{I|L}K{I|L}{I|L}A;[{I|L}T]AE{I|L}K{I|L}{I|L}A;[{I|L}T]EA{I|L}K{I|L}{I|L}A;{[QN]|[E{I|L}]|[KN]}TA{I|L}K{I|L}{I|L}A;[{I|L}A]{I|L}ETK{I|L}{I|L}A;[{I|L}T]E{I|L}AK{I|L}{I|L}A;[{I|L}A]E{I|L}TK{I|L}{I|L}A;{[QN]|[E{I|L}]|[KN]}T{I|L}AK{I|L}{I|L}A;{[ET]|[MV]}{I|L}A{I|L}K{I|L}{I|L}A 7.2739;5.8173;5.5113;5.4251;5.1507;5.1121;5.0651;5.0223;4.7906;4.5712 -;-;-;-;-;-;-;-;-;- 1328 1 1.621 103610.6 1.0 14550 5864 20412 HBL1_DMSO_200M_050219_1,20416 HBL1_DMSO_200M_050219_1,20416,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20417 99.405 138.0 476340.0 25 0 48620.0 + -1 AQYFEPLTL 9 97 540.2759899405407 1078.5374269478814 2 541.2817260622978 MULTI CID FTMS 0 0 0 20412 338706.5625 1.0 0 0.0 5 Carbamidomethyl (C) _LPTEYLAIC(Carbamidomethyl (C))_ nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1 13.50788311687929 0.4710407108020397 3 [{I|L}T]P{I|L} 4 -1 30.42 0.0 0.0 2.8204 0.0 0.0 0.0 651.2456843543845 651.2456843543845 12.460762528683702 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3252574989159953 0.0 [{I|L}T]P{I|L} 2.8204 - 419 1 1.621 60587.1 1.0 14551 5864 20412 HBL1_DMSO_200M_050219_1,20417 HBL1_DMSO_200M_050219_1,20417,LPTEYLAIC False False AQYFEPLTL 99.405389 541.281726062298 3247640.75 20412.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 6.186144669850667 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20418 99.409 179.0 746910.0 25 0 55055.0 + 37641 TLLRLLYEA 9 120 546.3265351617665 1090.638517390333 2 546.3294555544853 MULTI CID FTMS 0 0 0 20412 262851.15625 0.2319596410973138 -1 0.1457748413085937 6 Unmodified _TLLRLLYEA_ ENSG00000149100|ENST00000531120|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF;nc|ENSG00000149100|Q7L2H7-2|EIF3M 53.31671820480216 0.0330978755772958 3 [{I|L}T]{I|L}R{I|L}{I|L}YEA 9 0 + 74.147 0.0 0.0 6.7985 6.7985 91.331 0.0 0.0 0.0 19.628618393527404 59.45432175029467 19.628618393527404 10.268024924119672 0 1.7034021960761263 2.0 0.0 0.0 + + [{I|L}T]{I|L}R{I|L}{I|L}YEA;[{I|L}T]{I|L}R{I|L}Y{I|L}EA;[{I|L}T]{I|L}RY{I|L}{I|L}EA;{I|L}{I|L}[R{I|L}]T{I|L}YEA;[{I|L}T]{I|L}RYE{I|L}{I|L}A;{I|L}{I|L}[R{I|L}]TY{I|L}EA;[{I|L}V][{I|L}P][HS]{I|L}{I|L}EA 6.7985;5.857;5.4196;4.4413;3.5138;3.4999;0.80235 +;-;-;-;-;-;- + 351 1 1.621 105089.3 1.0 14552 5864 20412 HBL1_DMSO_200M_050219_1,20418 HBL1_DMSO_200M_050219_1,20418,TLLRLLYEA True True TLLRLLYEA 99.408876 546.329455554485 42274752.0 20412.0 nc|ENSG00000149100|Q7L2H7-2|EIF3M;;ENSG00000149100|ENST00000531120|EIF3M;;ENST00000524711.5_1_11:32608681-32615496:+|nuORF 6.385181744893392 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20419 99.416 397.0 387720.0 25 0 74225.0 + 15299 IPISNILMV 9 91 1015.5849216540838 1014.5776451874838 1 1015.583239734173 MULTI CID FTMS 0 0 0 20412 266656.40625 0.2803384652140019 3 -0.2695388793945312 7 Oxidation (M) _IPISNILM(Oxidation (M))V_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 126.56589448801844 0.0036077350702044 3 [{I|L}P]{I|L}SN{I|L}{I|L}{M(Oxidation (M))|F}V 9 0 + 104.06 0.0 0.0 10.256 10.256 89.7 0.0 0.0 0.0 16.251313126422332 12.068875478498114 12.068875478498114 4.165090889956673 0 2.075257498915996 1.5228787452803376 0.6382104921644451 1.610924374808178 + + [{I|L}P]{I|L}SN{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]S{I|L}N{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]{I|L}SN{I|L}{M(Oxidation (M))|F}{I|L}V;[{I|L}P]SN{I|L}{I|L}{M(Oxidation (M))|F}{I|L}V;[{I|L}P]S{I|L}N{I|L}{M(Oxidation (M))|F}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;{[QS]|[NT]}V{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]{I|L}SN{I|L}{M(Oxidation (M))|F}V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}SP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V 10.256;9.8456;9.7419;9.349;8.9385;8.8349;8.6543;8.5016;8.2068;8.2005 +;-;-;-;-;-;-;-;-;- + 3081 1 1.621 104267.4 1.0 14553 5864 20412 HBL1_DMSO_200M_050219_1,20419 HBL1_DMSO_200M_050219_1,20419,IPISNILMV True False IPISNILMV 99.416024 1015.58323973417 55478727.0 20412.0 ENSG00000137959|ENST00000370751|IFI44L;;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 7.649591604868571 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20420 99.422 321.0 339900.0 25 0 36615.0 + 21108 LPALLQQL 8 127 448.28384414161 894.55313535002 2 448.2841674685478 MULTI CID FTMS 0 0 0 20412 252743.109375 0.6373277885564865 3 -0.2695388793945312 8 Unmodified _LPALLQQL_ ENSG00000179262|ENST00000586534|RAD23A;nc|ENSG00000179262|P54725-2|RAD23A;nc|ENSG00000179262|P54725-3|RAD23A 45.7499826716795 0.1592378023510922 3 [{I|L}P]A{I|L}{I|L}QQ{I|L} 8 0 + 46.776 0.0 0.0 5.229 5.229 79.595 0.0 0.0 0.0 3.979400086720375 9.419628234359578 3.979400086720375 3.979400086720375 0 0.5172203223519531 1.3979400086720375 0.0 0.0 + + [{I|L}P]A{I|L}{I|L}QQ{I|L};[PA]{I|L}{I|L}{I|L}QQ{I|L};[{I|L}P]A{I|L}Q{I|L}Q{I|L};[PA]{I|L}{I|L}Q{I|L}Q{I|L};[{I|L}P]A{I|L}{I|L}[AG]Q{I|L};[PA]{I|L}{I|L}{I|L}[AG]Q{I|L};[{I|L}P]A{I|L}[AG]{I|L}Q{I|L};[PA]{I|L}{I|L}[AG]{I|L}Q{I|L};[{I|L}P]VVVQQ{I|L};[VP]VV{I|L}QQ{I|L} 5.229;4.7842;4.6956;4.2508;4.1936;3.7488;3.6602;3.2154;2.3053;2.2432 +;-;-;-;-;-;-;-;-;- + 184 1 1.621 87705.3 1.0 14554 5864 20412 HBL1_DMSO_200M_050219_1,20420 HBL1_DMSO_200M_050219_1,20420,LPALLQQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20421 99.436 800.0 146060.0 25 0 15496.0 -1 0 123 682.67336718979 2044.99827216957 3 683.0089599490166 MULTI CID FTMS 0 0 0 20412 205160.9375 0.6875449341977455 1 -0.1276397705078125 9 3 [VP]EMEK[SG]QAC(Carbamidomethyl (C))CP{I|L}VR{[QN]|[E{I|L}]|[KN]} 18 -1 [VP]EMEK[SG]Q + + 39.614 22.775 2.3111 1.9371 1.9371 48.78 0.0 0.0 0.0 0.0 4.286017919458629 0.0 0.0 0 0.0 0.0 0.5 0.0 [VP]EMEK[SG]QAC(Carbamidomethyl (C))CP{I|L}VR{[QN]|[E{I|L}]|[KN]} 1.9371 - 2677 + 1 1.621 93153.3 0.7699999809265137 14555 5864 20412 HBL1_DMSO_200M_050219_1,20421 HBL1_DMSO_200M_050219_1,20421, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20422 99.443 409.0 322330.0 25 0 30365.0 + 5325 DLFEDPFKYCI 11 128 695.3216502630307 1388.6287475928614 2 695.3222534060478 MULTI CID FTMS 0 0 0 20412 175828.25 1.0 0 0.0 10 Unmodified _DLFEDPFKYCI_ REV__ENSG00000118997|ENST00000312428|DNAH7 12.240655878213236 0.7805268987462184 3 [{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}KYTSV 8 -1 46.839 0.0 0.0 3.373 0.0 0.0 0.0 384.12162176246767 384.12162176246767 14.89720453282365 0.0 0.0 0.0 0 0.2887254899964357 0.0 1.4049471895720984 0.3807196863200844 [{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}KYTSV 3.373 - 4853 1 1.621 103116.2 1.0 14556 5864 20412 HBL1_DMSO_200M_050219_1,20422 HBL1_DMSO_200M_050219_1,20422,DLFEDPFKYCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20423 99.456 754.0 250270.0 25 0 24236.0 + 21102 LPALFRDI 8 154 472.78183582869104 943.549118724182 2 472.7822143435478 MULTI CID FTMS 0 0 0 20412 146341.640625 0.4229257891364396 -10 1.166961669921875 11 Unmodified _LPALFRDI_ ENSG00000141456|ENST00000572293|PELP1 36.12702656103203 0.299085846329477 3 {I|L}PA{I|L}{M(Oxidation (M))|F}[RD]{I|L} 8 0 + 69.959 0.0 0.0 7.4144 7.4144 84.898 0.0 0.0 0.0 27.32902204431447 4.393326938302636 4.393326938302636 3.0102999566398125 0 0.8807196863200843 1.5228787452803376 0.3807196863200844 0.0 + + {I|L}PA{I|L}{M(Oxidation (M))|F}[RD]{I|L};{I|L}PA{I|L}[RD]{M(Oxidation (M))|F}{I|L};{I|L}P{I|L}A{M(Oxidation (M))|F}[RD]{I|L};{I|L}PA{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}V;{I|L}P{I|L}A[RD]{M(Oxidation (M))|F}{I|L};{I|L}P{I|L}A{M(Oxidation (M))|F}{[RE]|[WV]}V;{I|L}{I|L}PA{M(Oxidation (M))|F}[RD]{I|L};{I|L}{I|L}PA[RD]{M(Oxidation (M))|F}{I|L};{I|L}{I|L}PA{M(Oxidation (M))|F}{[RE]|[WV]}V;{I|L}P{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L} 7.4144;7.0954;6.969;6.9488;6.6499;6.5033;6.0989;5.7798;5.6333;5.2893 +;-;-;-;-;-;-;-;-;- + 466 + 1 1.621 145479.3 1.0 14557 5864 20412 HBL1_DMSO_200M_050219_1,20423 HBL1_DMSO_200M_050219_1,20423,LPALFRDI False True LPALFRDI 99.456068 472.782214343548 14572432.5 20412.0 ENSG00000141456|ENST00000572293|PELP1 3.2468979358673096 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20424 99.459 59.0 1030400.0 25 0 78539.0 + 5661 DPFIIIHSI 9 95 527.7991713879284 1053.5837898426566 2 527.7997924685478 MULTI CID FTMS 0 0 0 20412 127826.59375 0.095641586081732 -6 0.6426239013671875 12 Unmodified _DPFIIIHSI_ ENSG00000120526|ENST00000239690|NUDCD1;ENST00000519607.5_1_8:110255240-110326067:-|nuORF;nc|ENSG00000120526|Q96RS6-2|NUDCD1;nc|ENSG00000120526|Q96RS6-3|NUDCD1 61.357469665136826 0.0253304979873734 3 [DP]{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HS{I|L} 9 0 + 57.679 0.0 0.0 5.4746 5.4746 80.1 0.0 0.0 0.0 20.87128018967597 3.679767852945943 3.679767852945943 3.679767852945943 0 0.8807196863200843 1.5228787452803376 1.1861818737241734 0.0 + + [DP]{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HS{I|L};[DP]{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HTV;[DP]KK{I|L}{I|L}{M(Oxidation (M))|F}{[HG]|PP};[H{I|L}]S{I|L}{I|L}Q{I|L}S[SG];[H{I|L}]{I|L}S{I|L}Q{I|L}S[SG];[DP]{M(Oxidation (M))|F}{I|L}[KP][PA]G{I|L};[DP]{M(Oxidation (M))|F}[KP]{I|L}[PA]G{I|L};[DP]{M(Oxidation (M))|F}{I|L}[KP][QP]{I|L};[DP]{M(Oxidation (M))|F}[KP]{I|L}[QP]{I|L};[PS][RK]{I|L}{I|L}{M(Oxidation (M))|F}{[HG]|PP} 5.4746;5.1253;3.2845;2.7088;2.5902;2.4135;2.4135;2.3649;2.3649;2.3433 +;-;-;-;-;-;-;-;-;- + 642 + 1 1.621 56154.3 1.0 14558 5864 20412 HBL1_DMSO_200M_050219_1,20424 HBL1_DMSO_200M_050219_1,20424,DPFIIIHSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20425 99.473 800.0 184660.0 25 0 7852.5 -1 0 119 791.372936740873 2371.0969808228188 3 791.7081786990166 MULTI CID FTMS 0 0 0 20412 130454.6953125 0.1356017301851372 28 -1.8395004272460933 13 3 {[HG]|PP}APPGDCNRAGM 13 -1 44.124 0.0 0.0 1.8609 0.0 0.0 0.0 1104.5442496194923 1104.5442496194923 11.23899488473196 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 {[HG]|PP}APPGDCNRAGM 1.8609 - 21799 1 1.621 109575.9 0.5899999737739563 14559 5864 20412 HBL1_DMSO_200M_050219_1,20425 HBL1_DMSO_200M_050219_1,20425, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20426 99.487 800.0 135550.0 25 0 12078.0 + 35271 SSIYEDIHSL 10 162 582.2843721419207 1162.5541913506413 2 582.2839843630791 MULTI CID FTMS 0 0 0 20412 115464.0546875 0.5067840153684559 3 -0.2695388793945312 14 Unmodified _SSIYEDIHSL_ REV__ENSG00000116748|ENST00000520113|AMPD1;REV__nc|ENSG00000116748|P23109-2|AMPD1 20.453626601364224 0.5043500229302764 3 {I|L}{I|L}HS{I|L} 5 -1 34.907 0.0 0.0 3.0027 0.0 0.0 581.1942239702987 0.0 581.1942239702987 0.0 22.43321004284397 0.0 0.0 0 0.3054621874040891 0.0 1.4386218330464624 0.0 {I|L}{I|L}HS{I|L} 3.0027 - 388 + 1 1.621 83864.8 0.5199999809265137 14560 5864 20412 HBL1_DMSO_200M_050219_1,20426 HBL1_DMSO_200M_050219_1,20426,SSIYEDIHSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20427 99.492 204.0 444240.0 25 0 66761.0 + 9561 FLIEKWLV 8 107 524.3152449245688 1046.6159369159377 2 524.3151122927666 MULTI CID FTMS 0 0 0 20412 132780.515625 0.8034757277697989 -1 0.1457748413085937 15 Unmodified _FLIEKWLV_ REV__ENSG00000125734|ENST00000264080|GPR108 42.09456458481378 0.1992492688217789 3 {M(Oxidation (M))|F}{I|L}{I|L}EG{I|L}RTV 9 -1 + 57.177 0.0 0.0 5.463 5.463 76.012 0.0 0.0 0.0 14.82016661481893 1.249387366082999 1.249387366082999 1.249387366082999 0 0.4247425010840047 0.0 0.555462187404089 0.3252574989159953 {M(Oxidation (M))|F}{I|L}{I|L}EG{I|L}RTV;{M(Oxidation (M))|F}{I|L}{I|L}EG{I|L}RS{I|L};{M(Oxidation (M))|F}{I|L}{I|L}W{I|L}RTV;{M(Oxidation (M))|F}{I|L}{I|L}W{I|L}RS{I|L};{M(Oxidation (M))|F}{I|L}{I|L}E[WK]{I|L}V;{M(Oxidation (M))|F}{I|L}{I|L}E[WK]V{I|L} 5.463;5.3436;4.844;4.7247;4.6186;4.4992 -;-;-;-;+;- + 259 + 1 1.621 77794.4 1.0 14561 5864 20412 HBL1_DMSO_200M_050219_1,20427 HBL1_DMSO_200M_050219_1,20427,FLIEKWLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20428 99.506 800.0 85820.0 25 0 7417.6 -1 0 87 752.0868396623559 3004.318252783024 4 752.3411743044853 MULTI CID FTMS 0 0 0 20412 115533.4296875 1.0 0 0.0 16 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 50.355 0.0 0.0 1.6761 0.0 0.0 0.0 2062.770465054867 2062.770465054867 29.54242509439325 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.6761 - 454 1 1.621 55476.1 0.5099999904632568 14562 5864 20412 HBL1_DMSO_200M_050219_1,20428 HBL1_DMSO_200M_050219_1,20428, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20430 99.51 9.0 5385200.0 25 0 723370.0 + 35606 STYKFFEVI 9 74 567.2979615580348 1132.5813701828697 2 567.2981445193291 MULTI CID FTMS 0 0 0 20429 6242365.5 0.7761137923583252 1 -0.1093521118164062 1 Unmodified _STYKFFEVI_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 49.55428908609986 0.0413471690215031 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKYTSV{I|L} 9 6 + 58.862 0.0 0.0 5.1971 5.1971 78.002 0.0 0.0 0.0 3.0102999566398125 16.478174818886373 3.0102999566398125 3.0102999566398125 0 0.6989700043360187 0.0 0.4247425010840047 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKYTSV{I|L};[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}KYTSV{I|L};[YK]{[MG]|[TS]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}EV{I|L};{[MG]|[TS]}YK{M(Oxidation (M))|F}{M(Oxidation (M))|F}EV{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}GVTYTSV{I|L};[YK]{[MG]|[TS]}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}V{I|L};[YK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YTSV{I|L};{[MG]|[TS]}YK{M(Oxidation (M))|F}E{M(Oxidation (M))|F}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}K[HD]V{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[RH]SV{I|L} 5.1971;4.9313;4.9137;4.8901;4.3604;4.0736;4.0731;4.0499;3.823;3.4717 -;-;-;+;-;-;-;-;-;- + 478 1 1.64 47081.5 1.0 14563 5865 20429 HBL1_DMSO_200M_050219_1,20430 HBL1_DMSO_200M_050219_1,20430,STYKFFEVI True True STYKFFEVI 99.510171 567.298144519329 270809728.0 20429.0 ENST00000490223.1_1_3:23959920-23960989:+|nuORF;;ENSG00000174748|ENST00000307839|RPL15;;ENST00000436146.1_1_3:23959450-23960989:+|nuORF 6.6610870361328125 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20431 99.512 60.0 1390000.0 25 0 137390.0 -1 0 91 917.095871020223 2748.2657836608687 3 917.4320556521416 MULTI CID FTMS 0 0 0 20429 1257259.25 0.1692727203450782 6 -0.4189910888671875 2 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 62.885 0.0 0.0 2.2882 0.0 0.0 0.0 1707.6507503317905 1707.6507503317905 20.84630327004689 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.2882 - 230 1 1.64 63783.3 1.0 14564 5865 20429 HBL1_DMSO_200M_050219_1,20431 HBL1_DMSO_200M_050219_1,20431, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20432 99.513 46.0 1894300.0 25 0 246530.0 + 21625 LPLAHVLEL 9 91 502.8102516002017 1003.6059502672034 2 502.8108398318291 MULTI CID FTMS 0 0 0 20429 1485273.0 0.7967911580484753 -2 0.2734146118164062 3 Unmodified _LPLAHVLEL_ ENSG00000068366|ENST00000672401|ACSL4;ENSG00000123983|ENST00000357430|ACSL3;nc|ENSG00000068366|O60488|ACSL4 77.98433622928108 0.0180125044636492 3 [{I|L}P]AHV{I|L}E{I|L}{I|L} 9 2 + 71.538 0.0 0.0 7.1281 7.1281 80.641 0.0 0.0 0.0 13.128552861292276 14.97302484056646 13.128552861292276 0.9640156839957824 0 1.1237125054200234 2.0 0.0 0.0 [{I|L}P]AHV{I|L}E{I|L}{I|L};[{I|L}P]AHV{I|L}{I|L}E{I|L};[{I|L}P]AH{I|L}VE{I|L}{I|L};[{I|L}P]AH{I|L}V{I|L}E{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}V{[WT]|[RM]}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}V{I|L}{[WT]|[RM]}{I|L};[HA]{I|L}PV{I|L}E{I|L}{I|L};[HA]{I|L}PV{I|L}{I|L}E{I|L};[HA]{I|L}VP{I|L}E{I|L}{I|L};[HA]{I|L}P{I|L}VE{I|L}{I|L} 7.1281;7.032;6.8281;6.7321;5.8199;5.52;5.1419;5.0458;4.8419;4.8419 -;-;-;-;-;-;-;-;-;- 910 1 1.64 71860.7 1.0 14565 5865 20429 HBL1_DMSO_200M_050219_1,20432 HBL1_DMSO_200M_050219_1,20432,LPLAHVLEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20433 99.514 49.0 825670.0 25 0 111750.0 + 6652 EAWPALQI 8 62 464.2505241855204 926.4864954378407 2 464.2505676150322 MULTI CID FTMS 0 0 0 20429 1421311.0 1.0 0 0.0 4 Unmodified _EAWPALQI_ ENSG00000158526|ENST00000375151|TSR2 56.541270873467816 0.1144128637334507 3 [PA]{I|L}Q{I|L} 5 3 18.002 0.0 0.0 1.9431 0.0 0.0 0.0 401.1554156861409 401.1554156861409 1.6946068015666782 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 + [PA]{I|L}Q{I|L} 1.9431 + + 65 1 1.64 38598.9 1.0 14566 5865 20429 HBL1_DMSO_200M_050219_1,20433 HBL1_DMSO_200M_050219_1,20433,EAWPALQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20434 99.516 84.0 1027400.0 25 0 89713.0 -1 0 88 688.0735427739423 2748.265065229369 4 688.3251830935478 MULTI CID FTMS 0 0 0 20429 1110051.75 0.1930928094720305 6 -0.4189910888671875 5 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 60.341 0.0 0.0 2.1956 0.0 0.0 0.0 1707.6550548136067 1707.6550548136067 25.23886815013292 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3252574989159953 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.1956 - 1450 1 1.64 71145.1 1.0 14567 5865 20429 HBL1_DMSO_200M_050219_1,20434 HBL1_DMSO_200M_050219_1,20434, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20435 99.519 114.0 660010.0 25 0 74688.0 + 39338 VAFSQVLTI 9 103 489.2864634843601 976.5583740355204 2 489.2869750857353 MULTI CID FTMS 0 0 0 20429 555103.125 0.456092510421421 -5 0.5800399780273438 6 Unmodified _VAFSQVLTI_ ENSG00000104976|ENST00000221573|SNAPC2 60.38955033654506 0.025866396858536 3 {[VA]|[{I|L}G]}GS{M(Oxidation (M))|F}AV 7 6 40.494 0.0 0.0 4.1466 0.0 0.0 0.0 342.2033327819724 342.2033327819724 10.968647834217007 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.6549471895720984 0.0 {[VA]|[{I|L}G]}GS{M(Oxidation (M))|F}AV 4.1466 - 780 1 1.64 60240.3 1.0 14568 5865 20429 HBL1_DMSO_200M_050219_1,20435 HBL1_DMSO_200M_050219_1,20435,VAFSQVLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20436 99.521 121.0 808530.0 25 0 81104.0 + 34730 SPYPWPLNHI 10 91 612.3142295699773 1222.6139062067546 2 612.3141967654228 MULTI CID FTMS 0 0 0 20429 511792.625 0.7869173111810407 4 -0.2697906494140625 7 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 99.79894945604345 0.0086314121850342 3 [PS]YPW{I|L}PV[HQ] 10 4 + 89.135 0.0 0.0 7.2905 7.2905 79.722 0.0 0.0 0.0 22.498774732166 0.1703333929878141 0.1703333929878141 0.1703333929878141 0 1.5356668758921828 1.5228787452803376 0.0 1.916386562212268 [PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PNH{I|L};[PS]YPWP{I|L}V[HQ];[PS]YPWP{I|L}NH{I|L};[PS]YPWV[{I|L}P][HQ];[PS]YPWV[QP]H{I|L};[PS]YPW{I|L}PGGH{I|L};[PS]YPWP{I|L}GGH{I|L} 7.2905;7.2766;7.1465;7.1326;5.6401;5.6262;4.9595;4.8155 -;-;-;+;-;-;-;- + 749 + 1 1.64 77437.4 1.0 14569 5865 20429 HBL1_DMSO_200M_050219_1,20436 HBL1_DMSO_200M_050219_1,20436,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20437 99.524 149.0 506750.0 25 0 95441.0 + 29964 QSSGEEELQL 10 93 560.2617283366452 1118.5089037400903 2 560.2624999880791 MULTI CID FTMS 0 0 0 20429 411919.3125 1.0 0 0.0 8 Unmodified _QSSGEEELQL_ ENSG00000063245|ENST00000270460|EPN1;nc|ENSG00000063245|Q9Y6I3-1|EPN1;nc|ENSG00000063245|Q9Y6I3-3|EPN1 38.17557092003332 0.1768326257063233 3 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}T{I|L}N 6 8 34.302 0.0 0.0 3.0668 0.0 0.0 0.0 415.0761812799438 415.0761812799438 5.814243664528576 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.7614393726401688 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}T{I|L}N 3.0668 - 115 + 1 1.64 63239.8 1.0 14570 5865 20429 HBL1_DMSO_200M_050219_1,20437 HBL1_DMSO_200M_050219_1,20437,QSSGEEELQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20438 99.527 160.0 595250.0 25 0 55658.0 + 30682 RFPPTPPLF 9 88 536.3031986435066 1070.591844353813 2 536.3035156130791 MULTI CID FTMS 0 0 0 20429 340086.375 0.7844998555387482 1 -0.1093521118164062 9 Unmodified _RFPPTPPLF_ chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A;ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A 42.09456458481378 0.0639583784996157 3 PP{I|L}{M(Oxidation (M))|F} 4 5 29.724 0.0 0.0 2.7764 0.0 0.0 598.3230639427148 0.0 598.3230639427148 0.0 5.543132534128574 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + PP{I|L}{M(Oxidation (M))|F} 2.7764 + + 269 + 1 1.64 81675.4 1.0 14571 5865 20429 HBL1_DMSO_200M_050219_1,20438 HBL1_DMSO_200M_050219_1,20438,RFPPTPPLF True True RFPPTPPLF 99.527211 536.3049 10984161.0 20429.0 nc|ENSG00000119866|Q9H165-6|BCL11A;;nc|ENSG00000119866|Q9H165-2|BCL11A;;ENSG00000119866|ENST00000642384|BCL11A;;chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A 5.787132898966472 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20439 99.533 308.0 378030.0 25 0 67391.0 27191 PGGPAGQA 8 94 327.6632908630747 653.3120287929494 2 327.6630432009697 MULTI CID FTMS 0 0 0 20429 294978.625 0.5306636767448351 -5 0.5800399780273438 10 Unmodified _PGGPAGQA_ ENST00000288774.7_1_1:2336406-2336715:-|nuORF 0.0 0.8243325171867699 3 {I|L} 1 8 10.485 0.0 0.0 1.6048 0.0 0.0 410.10559065994 127.09928308658438 537.2048737465244 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 1.6048 - 5 + 1 1.64 97964.8 1.0 14572 5865 20429 HBL1_DMSO_200M_050219_1,20439 HBL1_DMSO_200M_050219_1,20439,PGGPAGQA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20440 99.535 127.0 609300.0 25 0 71493.0 + 25267 MVVDIVQEL 9 106 523.2834418823593 1044.5523308315185 2 523.2850829958916 MULTI CID FTMS 0 0 0 20429 280441.9375 0.1724689287938682 -5 0.5800399780273438 11 Unmodified _MVVDIVQEL_ ENSG00000160209|ENST00000291565|PDXK;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;nc|ENSG00000160209|O00764-3|PDXK 44.40701690623563 0.0526327925666318 3 {[QN]|[E{I|L}]|[KN]}AM{I|L}V 6 7 34.777 0.0 0.0 3.3294 0.0 0.0 0.0 385.17370469309975 385.17370469309975 11.9235914846045 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.5994850021680094 0.0 {[QN]|[E{I|L}]|[KN]}AM{I|L}V 3.3294 - 449 1 1.64 67774.2 1.0 14573 5865 20429 HBL1_DMSO_200M_050219_1,20440 HBL1_DMSO_200M_050219_1,20440,MVVDIVQEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20441 99.543 407.0 396270.0 25 0 40068.0 + 45859 YYQPLVHLL 9 127 573.3230611209649 1144.6315693087297 2 573.3233520388603 MULTI CID FTMS 0 0 0 20429 241714.828125 1.0 0 0.0 12 Unmodified _YYQPLVHLL_ ENSG00000105808|ENST00000262940|RASA4;ENSG00000170667|ENST00000465829|RASA4B;ENST00000427076.5_1_7:43992756-44009363:-|nuORF;ENST00000523568.1_7:102228019-102246337:-|nuORF;nc|ENSG00000105808|O43374-2|RASA4 34.18733598223924 0.1073653526364521 3 [H{I|L}]VP{I|L}Q{M(Oxidation (M))|F}Y 8 7 37.172 0.0 0.0 3.2475 0.0 0.0 0.0 144.08778203749844 144.08778203749844 8.610469015915783 0.0 0.0 0.0 0 0.0 1.0 0.0 0.3807196863200844 [H{I|L}]VP{I|L}Q{M(Oxidation (M))|F}Y 3.2475 - 883 1 1.64 126716.0 1.0 14574 5865 20429 HBL1_DMSO_200M_050219_1,20441 HBL1_DMSO_200M_050219_1,20441,YYQPLVHLL True True YYQPLVHLL 99.542724 573.32335203886 1525813.25 20429.0 nc|ENSG00000105808|O43374-2|RASA4;;ENST00000523568.1_7:102228019-102246337:-|nuORF;;ENSG00000105808|ENST00000262940|RASA4;;ENST00000427076.5_1_7:43992756-44009363:-|nuORF;;ENSG00000170667|ENST00000465829|RASA4B 4.21051565806071 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20442 99.55 404.0 233010.0 25 0 31777.0 -1 IPISNILMV 9 109 508.29634384823146 1014.5781347632628 2 508.2967407107353 MULTI CID FTMS 0 0 0 20429 195382.4375 0.0968482335659977 4 -0.2697906494140625 13 Oxidation (M) _IPISNILM(Oxidation (M))V_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 39.957323273325 0.0756908302845263 3 {[TV]|[{I|L}S]}NP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V 9 -1 + 61.972 0.0 0.0 6.1082 6.1082 82.94 0.0 0.0 0.0 7.950326132080896 31.794667046884832 7.950326132080896 4.3753063169585005 0 0.7742275032520141 0.721246399047171 0.535666875892183 0.8807196863200843 {[TV]|[{I|L}S]}NP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}N{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}{I|L}NP{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P][NS]{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}N{I|L}{I|L}P{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}{I|L}N{I|L}P{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}GGP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[NS]{I|L}P{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[QV]|[N{I|L}]|[RA]|[KV]}SP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]E[KG]{I|L}{I|L}{M(Oxidation (M))|F}V 6.1082;5.6769;5.2066;5.0501;5.0144;4.5441;4.3325;4.3303;4.2993;4.1991 -;-;-;-;-;-;-;-;-;- 799 1 1.64 76132.8 1.0 14575 5865 20429 HBL1_DMSO_200M_050219_1,20442 HBL1_DMSO_200M_050219_1,20442,IPISNILMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20443 99.559 526.0 253210.0 25 0 37501.0 + 38753 TVATEKEFFFV 11 140 659.3397707170886 1316.6649885009772 2 659.3412353396416 MULTI CID FTMS 0 0 0 20429 194966.375 0.8021646236977282 -1 0.1276397705078125 14 Unmodified _TVATEKEFFFV_ ENSG00000163568|ENST00000368130|AIM2 88.36371040165146 0.0014365852967226 3 {[TV]|[{I|L}S]}ATGE{M(Oxidation (M))|F}VT{M(Oxidation (M))|F}{M(Oxidation (M))|F}V 12 4 + 94.995 0.0 0.0 7.2148 7.2148 80.142 0.0 0.0 0.0 16.311636746587908 0.5102999566398125 0.5102999566398125 0.5102999566398125 0 3.258864383480216 2.0 2.159379381312206 0.0 {[TV]|[{I|L}S]}ATGE{M(Oxidation (M))|F}VT{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}ATGE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}ATGE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}ATG{M(Oxidation (M))|F}EVT{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}ASAE{M(Oxidation (M))|F}VT{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}ATG{M(Oxidation (M))|F}E{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}ASAE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}ATW{M(Oxidation (M))|F}VT{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}ATW{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}ATGE{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V 7.2148;7.176;6.8738;6.8103;6.7745;6.7715;6.7358;6.7296;6.6909;6.479 -;-;-;-;-;-;-;-;-;- 28072 1 1.64 101760.8 1.0 14576 5865 20429 HBL1_DMSO_200M_050219_1,20443 HBL1_DMSO_200M_050219_1,20443,TVATEKEFFFV True True TVATEKEFFFV 99.559221 659.341235339642 4664350.5 20429.0 ENSG00000163568|ENST00000368130|AIM2 6.916921774546306 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20444 99.564 255.0 419560.0 25 0 31510.0 + + 9554 RVTIMGIYSI 10 108 576.8263213830395 1151.638089832879 2 576.8264648318291 MULTI CID FTMS 0 0 0 20429 167581.671875 1.0 0 0.0 15 Unmodified _FLHLLFYSL_ ENST00000493076.5_1_22:35806581-35817581:+|nuORF;ENSG00000100297|ENST00000216122|MCM5 38.15118350030904 0.0856056900103839 3 {[TV]|[{I|L}S]}[R{I|L}]MG{I|L}YS{I|L} 10 -1 + 57.44 0.0 0.0 4.9876 4.9876 86.595 0.0 0.0 0.0 8.819006879220055 22.54596304125073 8.819006879220055 15.536049848239344 0 0.8494850021680094 1.3010299956639813 0.5 0.0 {[TV]|[{I|L}S]}[R{I|L}]MG{I|L}YS{I|L};{[TV]|[{I|L}S]}YS{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}S{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};{[TV]|[{I|L}S]}YS{I|L}{I|L}[KT]D{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[KQ]P[KA]YS{I|L};{[TV]|[{I|L}S]}YS{I|L}{I|L}D[KT]{I|L};{[TV]|[{I|L}S]}YS{I|L}VE[KT]{I|L};[{M(Oxidation (M))|F}V][KT]{I|L}{I|L}S{I|L}[MT];{[TV]|[{I|L}S]}Y[WK][KQ]S{I|L};[{M(Oxidation (M))|F}V][KT]{I|L}{I|L}S[MT]{I|L} 4.9876;3.6386;3.1241;2.9431;2.8;2.7901;2.706;2.6256;2.5973;2.5903 -;-;-;-;-;-;-;-;-;- 1570 1 1.64 86415.1 1.0 14577 5865 20429 HBL1_DMSO_200M_050219_1,20444 HBL1_DMSO_200M_050219_1,20444,FLHLLFYSL False False RVTIMGIYSI 99.563965 576.826464831829 1497167.75 20429.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 3.54667059580485 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20445 99.568 215.0 516480.0 25 0 53916.0 21712 LPLSLLSTVP 10 128 520.3230503943014 1038.6315478554027 2 520.3133422732353 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _LPLSLLSTVP_ ENST00000318217.9_1_17:30821573-30821762:-|nuORF 26.88365393820708 0.3646707531412818 3 {I|L}{I|L}D 3 8 25.432 0.0 0.0 2.4486 0.0 0.0 0.0 694.4287813775999 694.4287813775999 0.2983187711004049 0.0 0.0 0.0 0 0.25 1.6989700043360187 0.0 0.0 {I|L}{I|L}D 2.4486 - 749 + 1 1.64 93002.6 1.0 14578 5865 20429 HBL1_DMSO_200M_050219_1,20445 HBL1_DMSO_200M_050219_1,20445,LPLSLLSTVP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20446 99.58 610.0 229430.0 25 0 29290.0 + 30279 QYPENILSF 9 159 555.7768449651408 1109.5391369970814 2 555.7780029177666 MULTI CID FTMS 0 0 0 20429 142295.765625 0.7295979368889259 1 -0.1093521118164062 17 Unmodified _QYPENILSF_ ENSG00000189362|ENST00000409150|NEMP2;nc|ENSG00000189362|A6NFY4-2|NEMP2 57.47134341890925 0.0274820932774257 3 {[TV]|[{I|L}S]}[QP]CC{I|L}{I|L}S{M(Oxidation (M))|F} 10 5 {[TV]|[{I|L}S]}[QP]CC{I|L} + + 32.312 25.202 3.3859 2.9122 2.9122 50.042 0.0 0.0 0.0 0.0 7.109676808254896 0.0 0.0 0 0.4247425010840047 0.0 0.6382104921644451 0.0 {[TV]|[{I|L}S]}[QP]CC{I|L}{I|L}S{M(Oxidation (M))|F} 2.9122 - 1604 + 1 1.64 109734.9 1.0 14579 5865 20429 HBL1_DMSO_200M_050219_1,20446 HBL1_DMSO_200M_050219_1,20446,QYPENILSF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20447 99.594 800.0 122900.0 25 0 15183.0 20319 LLESYIECTM 10 131 601.2770477783645 1200.5395426235289 2 601.2773315310478 MULTI CID FTMS 0 0 0 20429 109710.7109375 0.0439545853387908 17 -1.0193557739257812 18 Unmodified _LLESYIECTM_ ENSG00000186141|ENST00000334163|POLR3C 14.838274106304384 0.5985701837916485 3 {[TV]|[{I|L}S]}{I|L}E 4 6 29.901 0.0 0.0 2.4906 0.0 0.0 0.0 755.2745029108913 755.2745029108913 0.0754213597637338 0.0 0.0 0.0 0 0.0 2.0 0.5709991640913001 0.0 {[TV]|[{I|L}S]}{I|L}E 2.4906 - 314 1 1.64 75161.3 0.4799999892711639 14580 5865 20429 HBL1_DMSO_200M_050219_1,20447 HBL1_DMSO_200M_050219_1,20447,LLESYIECTM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20448 99.601 419.0 230650.0 25 0 20548.0 + 34465 RLTDYVAFL 9 141 549.3035147777397 0 549.3036987185478 PEAK CID FTMS 0 0 0 20429 107004.5703125 0.4891687465093393 6 -0.4189910888671875 19 Unmodified _SLYVLGWFL_ ENST00000465362.1_1_2:238005439-238006382:+|nuORF;ENSG00000198612|ENST00000354371|COPS8;nc|ENSG00000198612|Q99627-2|COPS8 23.1484247019978 0.1725298825155634 3 {M(Oxidation (M))|F}AVY 4 8 20.037 0.0 0.0 1.8272 0.0 0.0 131.09914273731675 482.2371004693969 613.3362432067137 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {M(Oxidation (M))|F}AVY 1.8272 - 408 + 1 1.64 81348.8 1.0 14581 5865 20429 HBL1_DMSO_200M_050219_1,20448 HBL1_DMSO_200M_050219_1,20448,SLYVLGWFL False False RLTDYVAFL 99.601196 549.303698718548 2408477.5 20429.0 ENST00000465362.1_1_2:238005439-238006382:+|nuORF;;ENSG00000198612|ENST00000354371|COPS8;;nc|ENSG00000198612|Q99627-2|COPS8 2.641026020050049 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20449 99.615 800.0 85987.0 25 0 6715.5 + 31099 RLLESLDQLEL 11 107 664.8743526406378 1327.7341523480754 2 664.8754150271416 MULTI CID FTMS 0 0 0 20429 95681.109375 0.3530464687229749 2 -0.1418991088867187 20 Unmodified _RLLESLDQLEL_ ENSG00000112208|ENST00000370693|BAG2 30.43146612281011 0.3776625119172622 3 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}DQ{I|L}E{I|L} 11 2 + 79.033 0.0 0.0 5.9524 5.9524 83.561 0.0 0.0 0.0 11.95651427860173 69.27860665376 11.95651427860173 5.198405410982616 0 1.0189301784845295 1.154901959985743 0.2302046884880938 0.0 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}DQ{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[RV]T{I|L}DQ{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}D[AG]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[RV]T{I|L}D[AG]{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]T{I|L}DQ{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}][WE]Q{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]T{I|L}D[AG]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}DQV[KQ];{[QN]|[E{I|L}]|[KN]}[RV]T{I|L}DQV[KQ];[{I|L}T][RN]{[QV]|[N{I|L}]|[RA]|[KV]}DQ{I|L}E{I|L} 5.9524;5.5609;5.2649;4.8734;4.751;4.2717;4.0635;3.8093;3.4178;3.3264 -;-;-;-;-;-;-;-;-;- 340 1 1.64 57721.1 0.4600000083446502 14582 5865 20429 HBL1_DMSO_200M_050219_1,20449 HBL1_DMSO_200M_050219_1,20449,RLLESLDQLEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20451 99.632 800.0 179320.0 25 0 9630.4 + 27423 PIPTSEPPLLE 11 160 596.8262395194272 1191.6379261056543 2 596.8259155154228 MULTI CID FTMS 0 0 0 20450 115349.7109375 0.4769152824649987 2 -0.10552978515625 1 Unmodified _PIPTSEPPLLE_ REV__ENSG00000114867|ENST00000346169|EIF4G1;REV__ENST00000442406.5_1_3:184038690-184052693:+|nuORF;REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000114867|Q04637-4|EIF4G1;REV__nc|ENSG00000114867|Q04637-5|EIF4G1;REV__nc|ENSG00000114867|Q04637-6|EIF4G1;REV__nc|ENSG00000114867|Q04637-7|EIF4G1;REV__nc|ENSG00000114867|Q04637-8|EIF4G1;REV__nc|ENSG00000114867|Q04637-9|EIF4G1 27.628801355627647 0.4434699450731472 3 {[QN]|[E{I|L}]|[KN]}PPDP[RK]{I|L}Q 10 -1 + 50.263 0.0 0.0 4.218 4.218 74.823 0.0 0.0 0.0 8.219165085264997 2.0655994197821386 2.0655994197821386 3.0102999566398125 0 0.3252574989159953 0.6989700043360187 0.2396518287104437 0.0 {[QN]|[E{I|L}]|[KN]}PPDP[RK]{I|L}Q;{[QN]|[E{I|L}]|[KN]}PP[RN]EP{I|L}Q;{[QN]|[E{I|L}]|[KN]}PDPP[RK]{I|L}Q;{[QN]|[E{I|L}]|[KN]}PP[RN]E{I|L}PQ;{[QN]|[E{I|L}]|[KN]}PPQ[RD]P{I|L}Q;{[QN]|[E{I|L}]|[KN]}P{[RE]|[WV]}PNP{I|L}Q;{[QN]|[E{I|L}]|[KN]}PPQ[RD]{I|L}PQ;{[QN]|[E{I|L}]|[KN]}P{[RE]|[WV]}PN{I|L}PQ;[{I|L}P]E{[RE]|[WV]}PNP{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}AVPNP{I|L}Q 4.218;3.9654;3.9654;3.6664;3.565;3.5206;3.266;3.2216;3.1969;3.1338 -;-;-;-;-;-;-;-;-;- 2327 1 1.65 107426.0 0.5299999713897705 14583 5866 20450 HBL1_DMSO_200M_050219_1,20451 HBL1_DMSO_200M_050219_1,20451,PIPTSEPPLLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20452 99.634 57.0 1619200.0 25 0 220810.0 + 19582 LFVVGTEVDS 10 97 533.2768683767675 1064.539183820335 2 533.2775146365166 MULTI CID FTMS 0 0 0 20450 1083546.375 0.7389908671014886 -4 0.453643798828125 2 Unmodified _LFVVGTEVDS_ REV__ENSG00000204386|ENST00000375631|NEU1;REV__ENST00000480384.1_1_6:31828203-31830565:-|nuORF 26.88365393820708 0.3646707531412818 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}GV 7 -1 39.569 0.0 0.0 3.7171 0.0 0.0 0.0 336.07017369224235 336.07017369224235 6.381900822422679 0.0 0.0 0.0 0 1.1989700043360187 1.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}GV 3.7171 - 202 + 1 1.65 76396.8 1.0 14584 5866 20450 HBL1_DMSO_200M_050219_1,20452 HBL1_DMSO_200M_050219_1,20452,LFVVGTEVDS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20453 99.648 800.0 192170.0 25 0 24335.0 4777 DELFNRYERAI 11 159 713.3576587041458 1424.7007644750915 2 713.3600952029228 MULTI CID FTMS 0 0 0 20450 144990.265625 0.9785264405999318 -4 0.453643798828125 3 Unmodified _DELFNRYERAI_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107 12.240655878213236 0.7805268987462184 3 MEN{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK 10 9 94.568 0.0 0.0 6.6377 0.0 0.0 226.12721170889048 0.0 226.12721170889048 0.0 49.4764165628652 0.0 0.0 0 1.9124379954164592 0.0 0.3807196863200844 1.4291746928241125 MEN{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}VDK 6.6377 - 5396 + 1 1.65 112046.1 0.5600000023841858 14585 5866 20450 HBL1_DMSO_200M_050219_1,20453 HBL1_DMSO_200M_050219_1,20453,DELFNRYERAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20455 99.652 129.0 904360.0 25 0 201000.0 + 24181 LYYLVFTL 8 102 516.2919191810124 1030.5692854288247 2 516.2925903201103 MULTI CID FTMS 0 0 0 20454 370929.40625 0.7462180316866053 2 -0.1278915405273437 1 Unmodified _LYYLVFTL_ ENSG00000007541|ENST00000321878|PIGQ;ENST00000480424.6_1_16:629069-630269:+|nuORF;nc|ENSG00000007541|Q9BRB3|PIGQ 48.847882008758354 0.1446664477986014 3 [Y{I|L}]Y{I|L}{M(Oxidation (M))|F}VT{I|L} 8 2 + 44.518 0.0 0.0 4.3198 4.3198 53.456 0.0 0.0 0.0 5.926003480513479 5.926003480513479 5.926003480513479 0.0 0 0.5924778212679485 1.6989700043360187 0.0 0.0 [Y{I|L}]Y{I|L}{M(Oxidation (M))|F}VT{I|L};[Y{I|L}]Y{M(Oxidation (M))|F}{I|L}VT{I|L};[Y{I|L}]Y{I|L}V{M(Oxidation (M))|F}T{I|L};[{M(Oxidation (M))|F}E]A[{I|L}P]{I|L}KT{I|L};[NP]VE{M(Oxidation (M))|F}{I|L}VT{I|L};[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}VT{I|L};[NP]VE{I|L}{M(Oxidation (M))|F}VT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NVE{I|L}VT{I|L};[{I|L}P][DN]{M(Oxidation (M))|F}{I|L}VT{I|L};[NP]V{M(Oxidation (M))|F}E{I|L}VT{I|L} 4.3198;4.3198;4.0277;3.7448;3.4187;3.1798;3.1526;2.9611;2.9061;2.8605 -;-;+;-;-;-;-;-;-;- + 578 1 1.65 93735.1 1.0 14586 5867 20454 HBL1_DMSO_200M_050219_1,20455 HBL1_DMSO_200M_050219_1,20455,LYYLVFTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20456 99.666 800.0 110370.0 25 0 11071.0 -1 0 116 1066.161181628704 0 1066.161181628704 PEAK CID FTMS 0 0 0 -1 0 2 3 C(Carbamidomethyl (C))VM 3 -1 9.9215 0.0 0.0 0.46573 0.0 0.0 1164.8745350329957 572.2741793268186 1737.1487143598142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))VM 0.46573 - 215 + 1 1.65 63020.2 0.7400000095367432 14587 5867 20454 HBL1_DMSO_200M_050219_1,20456 HBL1_DMSO_200M_050219_1,20456, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20457 99.67 207.0 474820.0 25 0 95532.0 + 2227 AQDEHLITFF 10 96 610.8008919489225 1219.587230964645 2 610.8010131716728 MULTI CID FTMS 0 0 0 20454 364910.4375 0.8238857086009591 -3 0.2695388793945312 3 Unmodified _AQDEHLITFF_ ENSG00000144028|ENST00000323853|SNRNP200 38.61474834105838 0.1721950110283317 3 [QA]D{[YC]|[HE]}{I|L}{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F} 10 0 + 56.107 0.0 0.0 4.6005 4.6005 75.565 0.0 0.0 0.0 2.9149305519032254 15.026975159433531 2.9149305519032254 2.9149305519032254 0 0.9247425010840048 0.0 1.0 0.3494850021680094 + + [QA]D{[YC]|[HE]}{I|L}{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D[QA]{I|L}{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D{I|L}[QA]{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D{I|L}{I|L}[QA]T{M(Oxidation (M))|F}{M(Oxidation (M))|F};[QA]D{[YC]|[HE]}{I|L}T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D{I|L}{I|L}GAAT{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D{I|L}{I|L}T[QA]{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D{I|L}[QA]T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D[QA]{I|L}T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};[QA]D[HT]{I|L}{I|L}E{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4.6005;4.3615;4.3615;4.1147;4.1068;3.9609;3.9332;3.8678;3.8678;3.86 +;-;-;-;-;-;-;-;-;- + 1527 1 1.65 78451.3 1.0 14588 5867 20454 HBL1_DMSO_200M_050219_1,20457 HBL1_DMSO_200M_050219_1,20457,AQDEHLITFF False True AQDEHLITFF 99.670281 610.801013171673 4187561.75 20454.0 ENSG00000144028|ENST00000323853|SNRNP200 7.170778115590413 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20458 99.675 226.0 448670.0 25 0 72870.0 + 16486 KALDLSLYL 9 103 518.307988598125 1034.60142426305 2 518.3090087771416 MULTI CID FTMS 0 0 0 20454 261009.125 1.0 0 0.0 4 Unmodified _KALDLSLYL_ ENSG00000164307|ENST00000443439|ERAP1;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1 53.832793166522166 0.0319663582346103 3 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S{I|L}Y{I|L} 9 3 + 64.724 0.0 0.0 6.2559 6.2559 78.589 0.0 0.0 0.0 1.249387366082999 16.478174818886373 1.249387366082999 1.249387366082999 0 0.805462187404089 1.0457574905606752 1.4634679910804405 0.3494850021680094 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KA]{I|L}SY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]KS{I|L}Y{I|L};{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}[KA]{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}[KA]{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]KSY{I|L}{I|L};[{I|L}P]{[MS]|[{M(Oxidation (M))|F}A]}RRY{I|L};{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}[KA]Y{I|L} 6.2559;6.1352;5.1439;5.0231;4.9011;4.2618;4.1411;3.789;3.3307;3.2694 -;-;-;-;-;-;-;-;-;- 374 1 1.65 81182.2 1.0 14589 5867 20454 HBL1_DMSO_200M_050219_1,20458 HBL1_DMSO_200M_050219_1,20458,KALDLSLYL True True KALDLSLYL 99.674554 518.3089 1937380.875 20454.0 nc|ENSG00000164307|Q9NZ08-2|ERAP1;;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;;ENSG00000164307|ENST00000443439|ERAP1 4.317226409912109 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20459 99.68 269.0 252670.0 25 0 24015.0 -1 0 100 1108.5041826183333 2214.9938123034667 2 1109.007006824017 MULTI CID FTMS 0 0 0 20454 205614.875 1.0 0 0.0 5 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N{I|L}{[QS]|[NT]}A{M(Oxidation (M))|F}S 9 -1 30.428 0.0 0.0 1.3737 0.0 0.0 0.0 1220.4947638017668 1220.4947638017668 8.523785228153827 0.0 0.0 0.0 0 0.0 0.958607314841775 0.2614393726401688 1.031234684152075 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N{I|L}{[QS]|[NT]}A{M(Oxidation (M))|F}S 1.3737 - 1349 1 1.65 51118.1 1.0 14590 5867 20454 HBL1_DMSO_200M_050219_1,20459 HBL1_DMSO_200M_050219_1,20459, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20460 99.693 800.0 109890.0 25 0 8587.6 -1 0 111 1146.154589831829 0 1146.154589831829 PEAK CID FTMS 0 0 0 -1 0 6 3 G 1 -1 6.9897 0.0 0.0 0.30519 0.0 0.0 1407.310875365027 822.9264620416624 2230.237337406689 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.30519 - 37 + 1 1.65 54375.4 0.8199999928474426 14591 5867 20454 HBL1_DMSO_200M_050219_1,20460 HBL1_DMSO_200M_050219_1,20460, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20461 99.707 800.0 1010900.0 25 0 275380.0 + 14709 IKALALDP 8 168 420.7629734083485 839.5113938834969 2 420.7628356814384 MULTI CID FTMS 0 0 0 20454 127947.8828125 1.0 0 0.0 7 Unmodified _IKALALDP_ ENSG00000104093|ENST00000560891|DMXL2;nc|ENSG00000104093|Q8TDJ6-2|DMXL2;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;nc|ENSG00000104093|Q8TDJ6|DMXL2 57.47134341890925 0.1146309765603773 3 {I|L}AK{I|L}A{I|L}[DP] 8 2 + 76.552 0.0 0.0 9.1187 9.1187 88.724 0.0 0.0 0.0 23.166878083309363 4.894958096377422 4.894958096377422 3.7628749457997657 0 0.6109243748081782 1.6989700043360187 1.610924374808178 0.0 {I|L}AK{I|L}A{I|L}[DP];{I|L}AKA{I|L}{I|L}[DP];{I|L}AK{I|L}AE[VP];{I|L}AKA{I|L}E[VP];{I|L}AK{I|L}{I|L}A[DP];{I|L}AK{I|L}A[DP]{I|L};{I|L}AK{I|L}EA[VP];{I|L}AKA{I|L}[DP]{I|L};{I|L}KA{I|L}A{I|L}[DP];{I|L}KAA{I|L}{I|L}[DP] 9.1187;8.6705;8.3333;7.885;7.8348;7.3894;7.1102;6.9412;6.9156;6.4674 -;-;-;-;-;-;-;-;+;- + 2113 + 1 1.65 614139.5 0.8500000238418579 14592 5867 20454 HBL1_DMSO_200M_050219_1,20461 HBL1_DMSO_200M_050219_1,20461,IKALALDP True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20462 99.721 772.0 209680.0 25 0 18797.0 + 10253 FQTDLIYNL 9 163 563.7919755650148 1125.5693981968295 2 563.7917358279228 MULTI CID FTMS 0 0 0 20454 110771.921875 1.0 0 0.0 8 Unmodified _FQTDLIYNL_ ENSG00000113441|ENST00000231368|LNPEP;nc|ENSG00000113441|Q9UIQ6-2|LNPEP;nc|ENSG00000113441|Q9UIQ6-3|LNPEP 53.832793166522166 0.0319663582346103 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TMK{I|L}YN{I|L} 9 3 + 45.446 0.0 0.0 4.0376 4.0376 76.767 0.0 0.0 0.0 3.3132665933363583 4.771212547196626 3.3132665933363583 4.771212547196626 0 1.0924778212679485 1.5228787452803376 0.0 0.7742275032520141 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TMK{I|L}YN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TMK{I|L}YQV;{[ES]|[DT]|[{I|L}C]}EMK{I|L}YN{I|L};{[ES]|[DT]|[{I|L}C]}EMK{I|L}YQV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TMK{I|L}YGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TMK{I|L}Y[AG]V;{[ES]|[DT]|[{I|L}C]}EMK{I|L}YGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T[HA]{[QV]|[N{I|L}]|[RA]|[KV]}E[TP];{NN|[MP]|[D{I|L}]|[EV]}[VP]PKME[TP];{NN|[MP]|[D{I|L}]|[EV]}[DP]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}E[TP] 4.0376;3.6137;3.062;2.6381;2.5316;2.1077;1.556;1.4558;1.2886;1.1322 -;-;-;-;-;-;-;-;-;- 1994 + 1 1.65 124294.4 1.0 14593 5867 20454 HBL1_DMSO_200M_050219_1,20462 HBL1_DMSO_200M_050219_1,20462,FQTDLIYNL True True FQTDLIYNL 99.72061 563.791735827923 761982.375 20454.0 nc|ENSG00000113441|Q9UIQ6-2|LNPEP;;nc|ENSG00000113441|Q9UIQ6-3|LNPEP;;ENSG00000113441|ENST00000231368|LNPEP 1.964180628458659 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20464 99.725 2.8 34102000.0 25 0 5297600.0 + 1813 ALTELLAKI 9 86 486.3103788438592 970.6062047545184 2 486.3109008669853 MULTI CID FTMS 0 0 0 20463 30995028.0 0.9104677464705492 1 -0.0549087524414062 1 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 81.89019881105858 0.0170587746866453 3 [{I|L}A]TE{I|L}{I|L}AK{I|L} 9 0 + 86.659 0.0 0.0 8.9284 8.9284 96.551 0.0 0.0 0.0 59.46182688141357 13.46787486224656 13.46787486224656 14.701007500887188 0 1.566901560044258 2.0 0.0 0.2396518287104437 + + [{I|L}A]TE{I|L}{I|L}AK{I|L};[{I|L}A]TE{I|L}{I|L}KA{I|L} 8.9284;7.4137 +;- + 582 + 1 1.71 75512.6 1.0 14594 5868 20463 HBL1_DMSO_200M_050219_1,20464 HBL1_DMSO_200M_050219_1,20464,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20465 99.726 51.0 2236700.0 25 0 195750.0 + 5662 DPFIIIHSI 9 129 527.7991713879284 1053.5837898426566 2 527.8003417849541 MULTI CID FTMS 0 0 0 20463 860591.25 0.6439060112877363 -2 0.10552978515625 2 Unmodified _DPFIIIHSI_ ENSG00000120526|ENST00000239690|NUDCD1;ENST00000519607.5_1_8:110255240-110326067:-|nuORF;nc|ENSG00000120526|Q96RS6-2|NUDCD1;nc|ENSG00000120526|Q96RS6-3|NUDCD1 120.45040980043947 0.0013734672977787 3 [DP]{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HS{I|L} 9 0 + 91.463 0.0 0.0 8.6811 8.6811 89.179 0.0 0.0 0.0 21.180639933510264 4.5593195564972575 4.5593195564972575 4.5593195564972575 0 1.5044321917401078 2.0 2.0669015600442577 0.0 + + [DP]{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HS{I|L};[DP]{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HTV;[DP]{M(Oxidation (M))|F}{I|L}{I|L}{I|L}{I|L}[HS];[DP]KK{I|L}{I|L}{M(Oxidation (M))|F}{[HG]|PP};[DP]KK{I|L}{I|L}E[DP];{[ET]|[MV]}E{I|L}{I|L}{I|L}HS{I|L};[PS][RK]{I|L}{I|L}{M(Oxidation (M))|F}{[HG]|PP};{[ET]|[MV]}E{I|L}{I|L}{I|L}HTV;{[ET]|[MV]}E{I|L}{I|L}{I|L}{I|L}[HS];[DP]KK{I|L}E{I|L}[DP] 8.6811;8.2484;8.1185;6.6708;6.3311;5.5655;5.4722;5.1327;5.0029;4.9952 +;-;-;-;-;-;-;-;-;- + 844 + 1 1.71 92544.3 1.0 14595 5868 20463 HBL1_DMSO_200M_050219_1,20465 HBL1_DMSO_200M_050219_1,20465,DPFIIIHSI True True DPFIIIHSI 99.726399 527.800341784954 27158322.0 20463.0 ENST00000519607.5_1_8:110255240-110326067:-|nuORF;;nc|ENSG00000120526|Q96RS6-2|NUDCD1;;nc|ENSG00000120526|Q96RS6-3|NUDCD1;;ENSG00000120526|ENST00000239690|NUDCD1 7.42376438776652 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20466 99.729 101.0 1167000.0 25 0 75666.0 + 37642 TLLRLLYEA 9 119 546.3265351617665 1090.638517390333 2 546.3269531130791 MULTI CID FTMS 0 0 0 20463 501595.25 0.4426453960714407 3 -0.2041091918945312 3 Unmodified _TLLRLLYEA_ ENSG00000149100|ENST00000531120|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF;nc|ENSG00000149100|Q7L2H7-2|EIF3M 57.24910588100465 0.0276051374632116 3 [{I|L}T]{I|L}R{I|L}{I|L}YEA 9 0 + 66.814 0.0 0.0 6.1262 6.1262 88.789 0.0 0.0 0.0 22.24301211992909 47.67474893909628 22.24301211992909 9.273174902439578 0 1.242992819099939 2.0 0.0 0.25 + + [{I|L}T]{I|L}R{I|L}{I|L}YEA;[{I|L}T]{I|L}R{I|L}Y{I|L}EA;[{I|L}T]{I|L}RY{I|L}{I|L}EA;[{I|L}T]{I|L}R{I|L}YE{I|L}A;[{I|L}T]{I|L}RY{I|L}E{I|L}A;{I|L}{I|L}[R{I|L}]T{I|L}YEA;{I|L}{I|L}[R{I|L}]TY{I|L}EA;[{I|L}T]{I|L}R{I|L}{[{M(Oxidation (M))|F}D]|MM}T{I|L};{I|L}{I|L}[R{I|L}]YT{I|L}EA;{I|L}{I|L}[R{I|L}]TYE{I|L}A 6.1262;5.2759;4.501;4.2496;3.4747;3.4381;2.5878;2.1546;1.8129;1.5615 +;-;-;-;-;-;-;-;-;- + 520 1 1.71 97653.7 1.0 14596 5868 20463 HBL1_DMSO_200M_050219_1,20466 HBL1_DMSO_200M_050219_1,20466,TLLRLLYEA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20467 99.736 430.0 286050.0 25 0 15179.0 + 2456 AQVPIILAV 9 130 923.592730199528 922.585453732928 1 923.5961791872978 MULTI CID FTMS 0 0 0 20463 256391.84375 0.4346587257834336 4 -0.2459945678710937 4 Unmodified _AQVPIILAV_ ENSG00000085760|ENST00000263629|MTIF2 48.345845343767074 0.0439967357579942 3 [{I|L}P]{I|L}{I|L}AN{I|L}AV 9 5 + 71.578 0.0 0.0 7.7584 7.7584 87.75 0.0 0.0 0.0 10.651668842475033 16.478174818886373 10.651668842475033 4.503187623076954 0 0.0 1.3979400086720375 0.0 0.5994850021680094 [{I|L}P]{I|L}{I|L}AN{I|L}AV;[{I|L}P]{I|L}{I|L}AQVAV;[{I|L}P]{I|L}A{I|L}N{I|L}AV;[{I|L}P]{I|L}{I|L}AVQAV;[{I|L}P]{I|L}AN{I|L}{I|L}AV;[{I|L}P]{I|L}AQV{I|L}AV;[{I|L}P]{I|L}{I|L}ANA{I|L}V;[{I|L}P]{I|L}{I|L}AAGVAV;[{I|L}P]{I|L}{I|L}GQ{I|L}AV;[{I|L}P]{I|L}A{I|L}QVAV 7.7584;7.2703;7.2413;7.1349;7.0075;6.915;6.8887;6.7824;6.7796;6.7532 -;-;-;-;-;-;-;-;-;- 3714 1 1.71 81181.5 1.0 14597 5868 20463 HBL1_DMSO_200M_050219_1,20467 HBL1_DMSO_200M_050219_1,20467,AQVPIILAV True True AQVPIILAV 99.736264 923.596179187298 6477795.0 20463.0 ENSG00000085760|ENST00000263629|MTIF2 6.224966843922933 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20468 99.749 752.0 271020.0 25 0 30260.0 + 1275 AIPIPPHSL 9 123 472.78183582869104 943.549118724182 2 472.7820617556572 MULTI CID FTMS 0 0 0 20463 165451.515625 0.4781531251848577 -6 0.559173583984375 5 Unmodified _AIPIPPHSL_ REV__ENSG00000105426|ENST00000262963|PTPRS;REV__ENST00000588552.5_1_19:5159112-5286160:-|nuORF;REV__nc|ENSG00000105426|Q13332-2|PTPRS;REV__nc|ENSG00000105426|Q13332-3|PTPRS;REV__nc|ENSG00000105426|Q13332-4|PTPRS;REV__nc|ENSG00000105426|Q13332-5|PTPRS;REV__nc|ENSG00000105426|Q13332-6|PTPRS;REV__nc|ENSG00000105426|Q13332-7|PTPRS 30.22481116460888 0.1466181017706357 3 {I|L}PA{I|L}{M(Oxidation (M))|F}{I|L}[RD] 8 -1 + 69.887 0.0 0.0 7.4069 7.4069 81.379 0.0 0.0 0.0 31.638568026386693 0.8715017571890087 0.8715017571890087 0.8715017571890087 0 0.8807196863200843 1.5228787452803376 0.4247425010840047 0.0 {I|L}PA{I|L}{M(Oxidation (M))|F}{I|L}[RD];{I|L}PA{I|L}{M(Oxidation (M))|F}[RD]{I|L};{I|L}PA{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}V;{I|L}P{I|L}A{M(Oxidation (M))|F}{I|L}[RD];{I|L}P{I|L}A{M(Oxidation (M))|F}[RD]{I|L};{I|L}PA{I|L}{I|L}{M(Oxidation (M))|F}[RD];{I|L}P{I|L}A{M(Oxidation (M))|F}{[RE]|[WV]}V;{I|L}P{I|L}A{I|L}{M(Oxidation (M))|F}[RD];{I|L}PA{I|L}{I|L}[HS]{[HG]|PP};{I|L}P{I|L}A{I|L}[HS]{[HG]|PP} 7.4069;7.3145;7.1141;7.0081;6.9157;6.9012;6.7153;6.5024;5.7162;5.3174 -;-;-;-;-;-;-;-;-;- 320 + 1 1.71 155365.4 1.0 14598 5868 20463 HBL1_DMSO_200M_050219_1,20468 HBL1_DMSO_200M_050219_1,20468,AIPIPPHSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20469 99.763 800.0 61958.0 25 0 1507.7 -1 0 111 1184.663623034954 0 1184.663623034954 PEAK CID FTMS 0 0 0 -1 0 6 3 WDEV 4 -1 13.532 0.0 0.0 0.57162 0.0 0.0 1355.8114246814332 479.26328455142817 1835.074709232861 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WDEV 0.57162 - 179 + 1 1.71 35126.0 0.75 14599 5868 20463 HBL1_DMSO_200M_050219_1,20469 HBL1_DMSO_200M_050219_1,20469, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20470 99.776 719.0 96560.0 25 0 5038.4 30952 RKRRRKRCRRR 11 144 814.0174438357353 0 814.0174438357353 PEAK CID FTMS 0 0 0 -1 0 7 Unmodified _RKRRRKRCRRR_ ENST00000319296.9_1_16:30419378-30419444:+|nuORF 0.0 0.4761840153648598 3 {I|L}G 2 11 5.5732 0.0 0.0 0.34275 0.0 0.0 1186.7394642322142 266.15192590885005 1452.8913901410642 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}G 0.34275 - 143 + 1 1.71 50472.2 1.0 14600 5868 20463 HBL1_DMSO_200M_050219_1,20470 HBL1_DMSO_200M_050219_1,20470,RKRRRKRCRRR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20472 99.78 37.0 2793000.0 25 0 375030.0 + 21626 LPLAHVLEL 9 96 502.8102516002017 1003.6059502672034 2 502.8106567263603 MULTI CID FTMS 0 0 0 20471 622529.9375 0.3339630827601861 2 -0.149200439453125 1 Unmodified _LPLAHVLEL_ ENSG00000068366|ENST00000672401|ACSL4;ENSG00000123983|ENST00000357430|ACSL3;nc|ENSG00000068366|O60488|ACSL4 77.98433622928108 0.0180125044636492 3 [{I|L}P]AHV{I|L}E{I|L}{I|L} 9 2 + 66.675 0.0 0.0 6.6435 6.6435 80.298 0.0 0.0 0.0 8.50766373802027 14.97302484056646 8.50766373802027 1.518637558036659 0 0.8494850021680094 2.0 0.0 0.0 [{I|L}P]AHV{I|L}E{I|L}{I|L};[{I|L}P]AHV{I|L}{I|L}E{I|L};[{I|L}P]AH{I|L}VE{I|L}{I|L};[{I|L}P]AH{I|L}V{I|L}E{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}V{[WT]|[RM]}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}V{I|L}{[WT]|[RM]}{I|L};[HV]A{I|L}P{I|L}E{I|L}{I|L};[{I|L}V]HAP{I|L}E{I|L}{I|L};[HV]A{I|L}P{I|L}{I|L}E{I|L};[{I|L}V]HAP{I|L}{I|L}E{I|L} 6.6435;6.4922;6.3436;6.1922;5.7958;5.4958;4.723;4.7108;4.5717;4.5595 -;-;-;-;-;-;-;-;-;- 914 1 1.71 82414.0 1.0 14601 5869 20471 HBL1_DMSO_200M_050219_1,20472 HBL1_DMSO_200M_050219_1,20472,LPLAHVLEL True True LPLAHVLEL 99.779957 502.81065672636 82343712.0 20471.0 ENSG00000068366|ENST00000672401|ACSL4;;ENSG00000123983|ENST00000357430|ACSL3;;nc|ENSG00000068366|O60488|ACSL4 4.191023270289104 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20473 99.781 48.0 986170.0 25 0 126880.0 + 35607 STYKFFEVI 9 76 567.2979615580348 1132.5813701828697 2 567.2977172732353 MULTI CID FTMS 0 0 0 20471 626226.5625 0.0778587976460834 5 -0.2275543212890625 2 Unmodified _STYKFFEVI_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 36.12702656103203 0.0967173616627612 3 [{I|L}P]E{[WT]|[RM]}{M(Oxidation (M))|F}EV{I|L} 9 5 + 36.813 0.0 0.0 3.2504 3.2504 77.248 0.0 0.0 0.0 7.257724967479863 10.330145895351857 7.257724967479863 7.257724967479863 0 0.8182503180159344 1.0 0.4247425010840047 0.0 [{I|L}P]E{[WT]|[RM]}{M(Oxidation (M))|F}EV{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKY{[MG]|[TS]}V{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EVG{[HG]|PP}EV{I|L};[YK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[MG]|[TS]}V{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ER[WH]V{I|L};[YR]YK{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P 3.2504;2.6095;2.3889;1.641;1.506;0.74006 -;-;-;-;-;- 277 1 1.71 46075.3 1.0 14602 5869 20471 HBL1_DMSO_200M_050219_1,20473 HBL1_DMSO_200M_050219_1,20473,STYKFFEVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20474 99.783 70.0 1223800.0 25 0 169380.0 + 6653 EAWPALQI 8 103 464.2505241855204 926.4864954378407 2 464.2502929568291 MULTI CID FTMS 0 0 0 20471 529829.125 0.3727749415856206 4 -0.2164154052734375 3 Unmodified _EAWPALQI_ ENSG00000158526|ENST00000375151|TSR2 74.39630413441286 0.1057069479668299 3 [PA]WEA 5 5 28.913 0.0 0.0 3.1207 0.0 0.0 0.0 369.21414718115744 369.21414718115744 11.478174818886371 0.0 0.0 0.0 0 0.0 1.0 0.9247425010840048 0.0 [PA]WEA 3.1207 - 399 1 1.71 74974.8 1.0 14603 5869 20471 HBL1_DMSO_200M_050219_1,20474 HBL1_DMSO_200M_050219_1,20474,EAWPALQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20475 99.785 68.0 1173100.0 25 0 153510.0 + 39339 VAFSQVLTI 9 90 489.2864634843601 976.5583740355204 2 489.2868835330009 MULTI CID FTMS 0 0 0 20471 507963.78125 0.4173611456312195 -1 0.0549087524414062 4 Unmodified _VAFSQVLTI_ ENSG00000104976|ENST00000221573|SNAPC2 67.34385681178166 0.0221257235307089 3 {[VA]|[{I|L}G]}GS{M(Oxidation (M))|F}AVP 8 6 53.748 0.0 0.0 5.5038 0.0 0.0 0.0 245.1531976041328 245.1531976041328 23.966463911461027 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.079689690656103 0.0 {[VA]|[{I|L}G]}GS{M(Oxidation (M))|F}AVP 5.5038 - 1095 1 1.71 65686.7 1.0 14604 5869 20471 HBL1_DMSO_200M_050219_1,20475 HBL1_DMSO_200M_050219_1,20475,VAFSQVLTI True True VAFSQVLTI 99.784518 489.286883533001 11054107.0 20471.0 ENSG00000104976|ENST00000221573|SNAPC2 3.091286341349284 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20476 99.787 144.0 689600.0 25 0 58638.0 -1 0 95 688.0735427739423 2748.265065229369 4 688.3247558474541 MULTI CID FTMS 0 0 0 20471 318898.9375 0.0554722712517866 10 -0.6195602416992188 5 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 74.976 0.0 0.0 2.7281 0.0 0.0 0.0 1707.6514104715138 1707.6514104715138 42.70303756120384 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.6382104921644451 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.7281 - 2591 1 1.71 80043.5 1.0 14605 5869 20471 HBL1_DMSO_200M_050219_1,20476 HBL1_DMSO_200M_050219_1,20476, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20477 99.79 118.0 666890.0 25 0 67705.0 -1 0 86 917.095871020223 2748.2657836608687 3 917.4308959841728 MULTI CID FTMS 0 0 0 20471 300020.46875 0.0403936426830966 10 -0.6195602416992188 6 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 60.583 0.0 0.0 2.2044 0.0 0.0 0.0 1707.6520441921864 1707.6520441921864 2.2948690190829524 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.2044 - 390 1 1.71 61228.7 1.0 14606 5869 20471 HBL1_DMSO_200M_050219_1,20477 HBL1_DMSO_200M_050219_1,20477, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20478 99.792 75.0 379550.0 25 0 41778.0 + 42894 VVPDWLHDI 9 56 547.2867028971427 1092.5588528610854 2 547.2869140505791 MULTI CID FTMS 0 0 0 20471 287955.34375 0.4197994472512357 -1 0.0549087524414062 7 Unmodified _VVPDWLHDI_ ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF 20.453626601364224 0.2830276176381075 3 VVPD 4 5 35.93 0.0 0.0 3.2886 0.0 0.0 0.0 679.3235567682249 679.3235567682249 21.31559999683283 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VVPD 3.2886 + + 84 + 1 1.71 30186.2 1.0 14607 5869 20471 HBL1_DMSO_200M_050219_1,20478 HBL1_DMSO_200M_050219_1,20478,VVPDWLHDI False True VVPDWLHDI 99.791647 547.286914050579 5229762.0 20471.0 ENSG00000021776|ENST00000156471|AQR;;ENST00000543879.6_1_15:35166876-35196659:-|nuORF 5.194224119186401 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20479 99.796 258.0 1194800.0 25 0 136700.0 + 11832 GLPLDGITEL 10 102 1027.5663078773664 1026.5590314107665 1 1027.567797839642 MULTI CID FTMS 0 0 0 20471 182850.75 0.287531356474913 1 -0.0379409790039062 8 Unmodified _GLPLDGITEL_ ENSG00000126215|ENST00000555055|XRCC3 180.00974506902125 3.411729497923211e-11 3 {[VA]|[{I|L}G]}PD{I|L}G{I|L}TE{I|L} 10 2 + 101.64 0.0 0.0 9.901 9.901 88.482 0.0 0.0 0.0 3.2390874094431865 15.026975159433531 3.2390874094431865 3.2390874094431865 0 1.4634679910804405 1.5228787452803376 1.841129063296272 0.0 {[VA]|[{I|L}G]}PD{I|L}G{I|L}TE{I|L};[{I|L}P]GD{I|L}G{I|L}TE{I|L};[{I|L}P]DG{I|L}G{I|L}TE{I|L};{[VA]|[{I|L}G]}P{I|L}DG{I|L}TE{I|L};{[VA]|[{I|L}G]}DP{I|L}G{I|L}TE{I|L};[{I|L}P]G{I|L}DG{I|L}TE{I|L};{[VA]|[{I|L}G]}PD{I|L}GT{I|L}E{I|L};{[VA]|[{I|L}G]}PD{I|L}G{I|L}ET{I|L};{[VA]|[{I|L}G]}PD{I|L}TE{I|L}G{I|L};{[VA]|[{I|L}G]}PD{I|L}TEG{I|L}{I|L} 9.901;9.5855;9.5855;9.3946;9.3145;9.0791;8.6988;8.6074;8.5246;8.4192 -;-;-;+;-;-;-;-;-;- + 11476 1 1.71 194907.1 1.0 14608 5869 20471 HBL1_DMSO_200M_050219_1,20479 HBL1_DMSO_200M_050219_1,20479,GLPLDGITEL True True GLPLDGITEL 99.796486 1027.56779783964 5146340.5 20471.0 ENSG00000126215|ENST00000555055|XRCC3 6.805854320526123 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20480 99.8 166.0 429430.0 25 0 40639.0 + 18362 KVPEELVFASL 11 79 616.3502398776113 1230.6859268220226 2 616.8516113162041 MULTI CID FTMS 0 0 0 20471 175311.15625 0.4119627709107406 -1 0.0549087524414062 9 Unmodified _KVPEELVFASL_ ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D 22.65808497894818 0.560183898709508 3 [EP]E{I|L}VKV{M(Oxidation (M))|F} 8 6 45.976 0.0 0.0 3.7358 0.0 0.0 0.0 286.1430550781351 286.1430550781351 21.50701980885163 0.0 0.0 0.0 0 0.3494850021680094 0.8860566476931632 0.0 0.0 [EP]E{I|L}VKV{M(Oxidation (M))|F} 3.7358 - 338 1 1.71 59329.7 1.0 14609 5869 20471 HBL1_DMSO_200M_050219_1,20480 HBL1_DMSO_200M_050219_1,20480,KVPEELVFASL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20481 99.814 800.0 140590.0 25 0 4177.5 -1 0 107 831.8982772101934 3323.5640029743736 4 832.6508056521416 MULTI CID FTMS 0 0 0 20471 129516.6328125 1.0 0 0.0 10 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 29.385 0.0 0.0 0.88416 0.0 0.0 0.0 2382.017619770515 2382.017619770515 19.79431761462553 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 0.88416 - 272 1 1.71 79926.2 0.6299999952316284 14610 5869 20471 HBL1_DMSO_200M_050219_1,20481 HBL1_DMSO_200M_050219_1,20481, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20483 99.818 22.0 2030900.0 25 0 188080.0 + 25268 MVVDIVQEL 9 88 523.2834418823593 1044.5523308315185 2 523.2830688357353 MULTI CID FTMS 0 0 0 20482 1626043.25 1.0 0 0.0 1 Unmodified _MVVDIVQEL_ ENSG00000160209|ENST00000291565|PDXK;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;nc|ENSG00000160209|O00764-3|PDXK 18.13498045792455 0.3457906370836843 3 {I|L} 1 8 15.485 0.0 0.0 1.4824 0.0 0.0 913.4572818586654 0.0 913.4572818586654 0.0 2.808487663269972 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4824 + + 143 + 1 1.704 45075.9 1.0 14611 5870 20482 HBL1_DMSO_200M_050219_1,20483 HBL1_DMSO_200M_050219_1,20483,MVVDIVQEL False True MVVDIVQEL 99.817899 523.283068835735 23085416.0 20482.0 nc|ENSG00000160209|O00764-3|PDXK;;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;;ENSG00000160209|ENST00000291565|PDXK 6.301879088083903 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20484 99.823 262.0 443780.0 25 0 46189.0 + 20606 LLPHYPNWF 9 118 593.8057857251362 1185.5970185170722 2 593.8071777224541 MULTI CID FTMS 0 0 0 20482 302290.59375 0.3247429782250667 -4 0.1983795166015625 2 Unmodified _LLPHYPNWF_ ENSG00000159596|ENST00000372025|TMEM69 81.86404211737425 0.017065112157077 3 {[WN]|[YH]}PNPW{I|L}{I|L}{M(Oxidation (M))|F} 9 6 + 50.015 0.0 0.0 4.2185 4.2185 74.826 0.0 0.0 0.0 3.0102999566398125 16.478174818886373 3.0102999566398125 3.0102999566398125 0 0.0 0.0 0.0 0.6861818737241735 {[WN]|[YH]}PNPW{I|L}{I|L}{M(Oxidation (M))|F};[NP]WNPW{I|L}{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YNPW{I|L}{I|L}{M(Oxidation (M))|F};{[WN]|[YH]}PNP{I|L}{I|L}W{M(Oxidation (M))|F};{[WN]|[YH]}P{I|L}{I|L}[NP]W{M(Oxidation (M))|F};[NP]WNP{I|L}{I|L}W{M(Oxidation (M))|F};[NP]W{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YNP{I|L}{I|L}W{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}PNP{I|L}W{I|L}{M(Oxidation (M))|F} 4.2185;3.9646;3.9609;3.9178;3.9152;3.6639;3.6613;3.6602;3.6575;3.6435 -;-;-;-;-;-;-;-;-;- 1373 1 1.704 92234.4 1.0 14612 5870 20482 HBL1_DMSO_200M_050219_1,20484 HBL1_DMSO_200M_050219_1,20484,LLPHYPNWF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20485 99.826 182.0 378240.0 25 0 67077.0 27192 PGGPAGQA 8 76 327.6632908630747 653.3120287929494 2 327.6631957888603 MULTI CID FTMS 0 0 0 20482 555867.375 1.0 0 0.0 3 Unmodified _PGGPAGQA_ ENST00000288774.7_1_1:2336406-2336715:-|nuORF 0.0 0.8243325171867699 3 {I|L} 1 8 8.9794 0.0 0.0 1.3744 0.0 0.0 410.1055296247837 127.09938989810782 537.2049195228916 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 1.3744 - 3 + 1 1.704 60643.2 1.0 14613 5870 20482 HBL1_DMSO_200M_050219_1,20485 HBL1_DMSO_200M_050219_1,20485,PGGPAGQA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20486 99.83 193.0 602260.0 25 0 83145.0 + 1140 AGVMHLFYV 9 117 518.7678703016767 1035.5211876701533 2 518.7685424685478 MULTI CID FTMS 0 0 0 20482 319106.4375 0.4133351823589357 -4 0.1983795166015625 4 Unmodified _AGVMHLFYV_ ENSG00000176170|ENST00000592299|SPHK1;nc|ENSG00000176170|Q9NYA1-2|SPHK1;nc|ENSG00000176170|Q9NYA1-3|SPHK1 28.17323086031832 0.1727213568982648 3 [H{I|L}]MN{I|L}{M(Oxidation (M))|F}YV 8 4 + 52.177 0.0 0.0 5.0387 5.0387 79.318 0.0 0.0 0.0 7.746907182741367 11.911225100727592 7.746907182741367 4.313637641589878 0 0.805462187404089 0.8538719643217619 0.0 0.0 [H{I|L}]MN{I|L}{M(Oxidation (M))|F}YV;[H{I|L}]MVGA{M(Oxidation (M))|F}YV;[H{I|L}]MVQ{M(Oxidation (M))|F}YV;[H{I|L}]MVG{M(Oxidation (M))|F}AYV;[HM]{I|L}N{I|L}{M(Oxidation (M))|F}YV;[H{I|L}]MGG{I|L}{M(Oxidation (M))|F}YV;[HM]VQ{I|L}{M(Oxidation (M))|F}YV;[H{I|L}]MVG{M(Oxidation (M))|F}YAV;[HM]{I|L}VGA{M(Oxidation (M))|F}YV;[HM]{I|L}VQ{M(Oxidation (M))|F}YV 5.0387;4.6221;4.5779;4.3314;4.2906;4.1442;3.9999;3.9212;3.874;3.8298 -;-;-;-;-;-;-;-;-;- 1668 1 1.704 93923.5 1.0 14614 5870 20482 HBL1_DMSO_200M_050219_1,20486 HBL1_DMSO_200M_050219_1,20486,AGVMHLFYV False True AGVMHLFYV 99.829992 518.768542468548 5083273.0 20482.0 ENSG00000176170|ENST00000592299|SPHK1;;nc|ENSG00000176170|Q9NYA1-2|SPHK1;;nc|ENSG00000176170|Q9NYA1-3|SPHK1 5.028348286946614 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20487 99.834 221.0 364850.0 25 0 30632.0 + 41996 VQPLELPMV 9 100 513.2882502690643 1024.5619476049285 2 513.2894164919853 MULTI CID FTMS 0 0 0 20482 262801.5625 1.0 0 0.0 5 Unmodified _VQPLELPMV_ ENSG00000068079|ENST00000415816|IFI35;ENST00000246911.6_1_17:41158964-41165399:+|nuORF;nc|ENSG00000068079|P80217-2|IFI35 32.30548876998284 0.1201446275138228 3 [{I|L}P]E{I|L}N{I|L} 6 5 43.703 0.0 0.0 4.2655 0.0 0.0 0.0 342.1467734752359 342.1467734752359 29.72357194224834 0.0 0.0 0.0 0 0.805462187404089 1.0969100130080565 0.3252574989159953 0.0 [{I|L}P]E{I|L}N{I|L} 4.2655 - 276 1 1.704 72639.0 1.0 14615 5870 20482 HBL1_DMSO_200M_050219_1,20487 HBL1_DMSO_200M_050219_1,20487,VQPLELPMV True True VQPLELPMV 99.834171 513.289416491985 2579714.5 20482.0 ENSG00000068079|ENST00000415816|IFI35;;nc|ENSG00000068079|P80217-2|IFI35;;ENST00000246911.6_1_17:41158964-41165399:+|nuORF 3.961554765701294 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20488 99.838 201.0 255290.0 25 0 41673.0 + + 44759 LPYLVSNVI 9 94 508.29634384823146 1014.5781347632628 2 509.3025390505791 MULTI CID FTMS 0 0 0 20482 266833.15625 0.6310389327827801 9 -0.5816192626953125 6 Unmodified _YPLLNSVPL_ ENSG00000165916|ENST00000298852|PSMC3;ENST00000531653.5_1_11:47445967-47447800:-|nuORF;ENST00000528362.1_1_11:47446139-47447800:-|nuORF 28.486842064014134 0.1687311288560894 3 [{I|L}P]YV{I|L}[NS]P{I|L} 9 -1 + 40.352 0.0 0.0 3.9772 3.9772 75.586 0.0 0.0 0.0 5.184465535402289 12.904849854573683 5.184465535402289 3.979400086720368 0 0.3182503180159344 1.3010299956639813 0.5 0.3807196863200844 [{I|L}P]YV{I|L}[NS]P{I|L};[{I|L}P]Y{I|L}V[NS]P{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}V{I|L}[NS]P{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}V[NS]P{I|L};[VP][Y{I|L}]{I|L}[NS]P{I|L} 3.9772;3.585;3.4662;3.074;0.72363 -;-;-;-;- 150 1 1.704 43371.4 1.0 14616 5870 20482 HBL1_DMSO_200M_050219_1,20488 HBL1_DMSO_200M_050219_1,20488,YPLLNSVPL False False LPYLVSNVI 99.837996 509.302539050579 2155643.25 20482.0 ENSG00000165916|ENST00000298852|PSMC3;;ENST00000531653.5_1_11:47445967-47447800:-|nuORF;;ENST00000528362.1_1_11:47446139-47447800:-|nuORF 4.071544726689656 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20489 99.842 227.0 384180.0 25 0 25693.0 + 30683 RFPPTPPLF 9 121 536.3031986435066 1070.591844353813 2 536.3036376833916 MULTI CID FTMS 0 0 0 20482 225747.09375 0.5207458323938066 6 -0.444732666015625 7 Unmodified _RFPPTPPLF_ chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A;ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A 30.63653989081413 0.1413794767160703 3 [{I|L}P]P[YQ]P{M(Oxidation (M))|F} 7 5 24.274 0.0 0.0 2.2674 0.0 0.0 0.0 225.1029887232068 225.1029887232068 5.86319773215088 0.0 0.0 0.0 0 0.9247425010840048 1.2218487496163564 0.0 0.0 [{I|L}P]P[YQ]P{M(Oxidation (M))|F} 2.2674 - 263 1 1.704 73105.4 1.0 14617 5870 20482 HBL1_DMSO_200M_050219_1,20489 HBL1_DMSO_200M_050219_1,20489,RFPPTPPLF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20490 99.856 800.0 281130.0 25 0 46782.0 + 9131 FFPVHFQEF 9 169 599.2885570161901 1196.56256109918 2 599.2899658083916 MULTI CID FTMS 0 0 0 20482 182819.21875 0.7213475263004739 -4 0.1983795166015625 8 Unmodified _FFPVHFQEF_ ENSG00000033100|ENST00000035307|CHPF2;nc|ENSG00000033100|Q9P2E5-2|CHPF2 58.6788170122104 0.0268135626297836 3 {[{M(Oxidation (M))|F}H]|[RQ]}VPQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E] 9 5 + 33.526 0.0 0.0 2.8019 2.8019 68.248 0.0 0.0 0.0 2.096142931993452 1.0340874929963917 1.0340874929963917 1.0340874929963917 0 0.3252574989159953 1.0457574905606752 0.0 0.3494850021680094 {[{M(Oxidation (M))|F}H]|[RQ]}VPQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];{[{M(Oxidation (M))|F}H]|[RQ]}VPQE{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[VP]H{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];[VP]H{M(Oxidation (M))|F}QE{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QN]|[E{I|L}]|[KN]}M[W{M(Oxidation (M))|F}]VP[{M(Oxidation (M))|F}E];[HV]P{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];[HV]P{M(Oxidation (M))|F}QE{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[{M(Oxidation (M))|F}H]|[RQ]}VP{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];{[{M(Oxidation (M))|F}H]|[RQ]}VP[AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{I|L}T][QT]{M(Oxidation (M))|F} 2.8019;2.7155;2.6267;2.5403;2.2029;2.1795;2.0931;2.0471;2.0323;1.9988 -;-;-;-;-;-;-;-;-;- 1654 1 1.704 164435.4 0.7400000095367432 14618 5870 20482 HBL1_DMSO_200M_050219_1,20490 HBL1_DMSO_200M_050219_1,20490,FFPVHFQEF True False FFPVHFQEF 99.856111 599.289965808392 2605824.0 20482.0 ENSG00000033100|ENST00000035307|CHPF2;;nc|ENSG00000033100|Q9P2E5-2|CHPF2 5.458832899729411 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20491 99.87 800.0 220420.0 25 0 41846.0 + 10118 FPWPKVLKI 9 143 376.570766370445 1126.6904697115351 3 376.5706664919853 MULTI CID FTMS 0 0 0 20482 144738.53125 0.3224189715439927 -18 1.696990966796875 9 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 34.93206674587334 0.1032771302489716 3 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 43.516 0.0 0.0 3.8623 3.8623 78.969 0.0 0.0 0.0 8.272433288252067 7.6176083419547425 7.6176083419547425 7.6176083419547425 0 0.2742275032520141 0.0 0.0 0.2215141619232908 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K 3.8623;3.1862 +;- + 282 + 1 1.704 142865.6 0.550000011920929 14619 5870 20482 HBL1_DMSO_200M_050219_1,20491 HBL1_DMSO_200M_050219_1,20491,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20492 99.877 404.0 155090.0 25 0 22467.0 + 45115 YPYVAVML 8 104 478.25155015215216 954.4885473711043 2 478.2511474490166 MULTI CID FTMS 0 0 0 20482 137562.34375 1.0 0 0.0 10 Unmodified _YPYVAVML_ ENSG00000188243|ENST00000682242|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF;nc|ENSG00000188243|Q7Z4G1-2|COMMD6 32.45364647766026 0.3613649037604678 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAYVM{I|L} 8 2 + 51.604 0.0 0.0 5.4065 5.4065 78.745 0.0 0.0 0.0 14.259687322722812 6.721675119240516 6.721675119240516 3.0102999566398125 0 0.6989700043360187 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAYVM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAVYM{I|L};[YV]VYAPM{I|L};[YV]YVAPM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[VA]|[{I|L}G]}VM{I|L};[YV]PAYVM{I|L};[VP]YAYVM{I|L};[YV]PAVYM{I|L};[VP]YAVYM{I|L};[{I|L}T]{[ES]|[DT]|[{I|L}C]}YVM{I|L} 5.4065;5.0911;3.9125;3.5971;3.2575;3.0506;2.7633;2.7352;2.4479;1.3761 -;-;-;-;+;-;-;-;-;- + 293 1 1.704 51766.8 1.0 14620 5870 20482 HBL1_DMSO_200M_050219_1,20492 HBL1_DMSO_200M_050219_1,20492,YPYVAVML False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20493 99.891 800.0 158430.0 25 0 23092.0 + 44484 YPALIGNLV 9 154 480.28166303513086 958.5487731370616 2 480.2824584841728 MULTI CID FTMS 0 0 0 20482 130000.1640625 0.4528565250011321 -13 1.1760482788085938 11 Unmodified _YPALIGNLV_ ENSG00000242485|ENST00000344843|MRPL20;nc|ENSG00000242485|Q9BYC9-2|MRPL20 34.18733598223924 0.1073653526364521 3 {[TV]|[{I|L}S]}M{I|L}{I|L}GN{I|L}V 9 3 + 49.545 0.0 0.0 5.1687 5.1687 76.417 0.0 0.0 0.0 2.0784156723082603 9.889917747712644 2.0784156723082603 2.0784156723082603 0 0.6237125054200234 1.154901959985743 0.1694451763165201 0.3494850021680094 {[TV]|[{I|L}S]}M{I|L}{I|L}GN{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}{I|L}GN{I|L}V;[{I|L}T]MV{I|L}GN{I|L}V;[PA]{I|L}Y{I|L}GN{I|L}V;[PA]{I|L}{I|L}YGN{I|L}V;[PA]Y{I|L}{I|L}GN{I|L}V;{[TV]|[{I|L}S]}M{I|L}{I|L}GGG{I|L}V;[{I|L}P]AY{I|L}GN{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}{I|L}GGG{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}{I|L}GN{I|L}V 5.1687;4.9519;4.4104;4.1891;3.8751;3.8751;3.8435;3.7367;3.6267;3.5946 -;+;-;-;-;-;-;-;-;- + 1201 1 1.704 96986.7 0.550000011920929 14621 5870 20482 HBL1_DMSO_200M_050219_1,20493 HBL1_DMSO_200M_050219_1,20493,YPALIGNLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20494 99.897 236.0 328800.0 25 0 32982.0 + 36663 TAYLFSRFV 9 100 552.2979907017366 1102.581428470273 2 552.2992431521416 MULTI CID FTMS 0 0 0 20482 130280.0703125 0.2766632746517405 -4 0.1983795166015625 12 Unmodified _TAYLFSRFV_ ENSG00000184575|ENST00000332707|XPOT 20.41453444215458 0.284085796332423 3 [TA]Y{I|L}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L} 9 4 + 49.862 0.0 0.0 4.5223 4.5223 78.004 0.0 0.0 0.0 20.465109887359528 1.8462377378117625 1.8462377378117625 4.726890629795548 0 0.8807196863200843 1.6989700043360187 0.3252574989159953 0.0 [TA]Y{I|L}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L};[TA]Y{I|L}V[WH]T{I|L};[TA]YV{I|L}[WH]T{I|L};{[QN]|[E{I|L}]|[KN]}[HK]{M(Oxidation (M))|F}{I|L}Y[PG];[TA]Y{I|L}VVVM[HA];[TA]Y{I|L}VVV[HC]V;[TA]VY{I|L}[WH]T{I|L};[TA]YV{I|L}VVM[HA];[TA]YV{I|L}VV[HC]V;[{I|L}T][RH]{M(Oxidation (M))|F}{I|L}[WM] 4.5223;4.0936;3.8205;3.716;3.5054;3.38;3.367;3.2324;3.107;2.9576 -;-;-;-;-;-;-;-;-;- 226 + 1 1.704 65211.0 1.0 14622 5870 20482 HBL1_DMSO_200M_050219_1,20494 HBL1_DMSO_200M_050219_1,20494,TAYLFSRFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20495 99.911 800.0 75096.0 25 0 9129.1 + 38754 TVATEKEFFFV 11 111 659.3397707170886 1316.6649885009772 2 659.3392211794853 MULTI CID FTMS 0 0 0 20482 109063.75 0.4487290794518445 4 -0.1896133422851562 13 Unmodified _TVATEKEFFFV_ ENSG00000163568|ENST00000368130|AIM2 21.59015148037692 0.5852593066373742 3 {[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[ET]|[MV]}A{M(Oxidation (M))|F}[W{I|L}] 11 7 + 46.418 0.0 0.0 3.5254 3.5254 71.575 0.0 0.0 0.0 14.7232012866874 14.973879452839526 14.7232012866874 2.138798199450818 0 0.5 2.0 0.6382104921644451 0.0 {[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[ET]|[MV]}A{M(Oxidation (M))|F}[W{I|L}];{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[ET]|[MV]}A{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}[W{I|L}];{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PG]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PG]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[ET]|[MV]}[RD]{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[W{I|L}];{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}A[HT]QQ{M(Oxidation (M))|F}WS{I|L};{[TV]|[{I|L}S]}A[HT]QQ{M(Oxidation (M))|F}WTV 3.5254;3.363;3.2968;3.1343;2.8689;2.5954;2.3493;2.1808;2.1241;2.1241 -;-;-;-;-;-;-;-;-;- 646 1 1.704 48699.9 0.5299999713897705 14623 5870 20482 HBL1_DMSO_200M_050219_1,20495 HBL1_DMSO_200M_050219_1,20495,TVATEKEFFFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20496 99.925 800.0 110430.0 25 0 6391.7 + -1 LLCTATMKM 9 125 1068.527880344378 1067.520603877778 1 1070.533007800579 MULTI CID FTMS 0 0 0 20482 85820.203125 1.0 0 0.0 14 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))TATMKM_ REV__ENSG00000164483|ENST00000439090|SAMD3;REV__nc|ENSG00000164483|Q8N6K7-3|SAMD3 11.640296217721598 0.521594087909532 3 {I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AN 6 -1 20.123 0.0 0.0 1.8851 0.0 0.0 0.0 359.15342965645215 359.15342965645215 4.8792965596795295 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AN 1.8851 - 992 1 1.704 61862.2 0.6100000143051147 14624 5870 20482 HBL1_DMSO_200M_050219_1,20496 HBL1_DMSO_200M_050219_1,20496,LLCTATMKM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20498 99.93 85.0 957620.0 25 0 125800.0 + 19578 LFVMFVYF 8 92 533.2768683767675 1064.539183820335 2 533.2775146365166 MULTI CID FTMS 0 0 0 20497 442095.9375 0.3015144231322545 1 -0.0418853759765625 1 Unmodified _LFVMFVYF_ REV__ENSG00000197121|ENST00000354764|PGAP1;REV__ENST00000470179.5_1_2:197712669-197791463:-|nuORF;REV__nc|ENSG00000197121|Q75T13-3|PGAP1;REV__nc|ENSG00000197121|Q75T13-4|PGAP1 17.086550045450526 0.6584923310065985 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}R 6 -1 35.623 0.0 0.0 3.3463 0.0 0.0 0.0 336.0699242166069 336.0699242166069 4.195925227640984 0.0 0.0 0.0 0 0.7742275032520141 1.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}R 3.3463 - 101 + 1 1.715 68768.5 1.0 14625 5871 20497 HBL1_DMSO_200M_050219_1,20498 HBL1_DMSO_200M_050219_1,20498,LFVMFVYF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20499 99.933 163.0 576030.0 25 0 63492.0 + 34731 SPYPWPLNHI 10 73 612.3146212862029 0 612.3143798708916 PEAK CID FTMS 0 0 0 20497 316272.0 0.4245873335949482 -3 0.2041091918945312 2 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 81.89019881105858 0.0002212351683707 3 YPWP{I|L}N 6 4 48.158 0.0 0.0 3.939 0.0 0.0 184.0828083411912 265.1316317193969 449.2144400605881 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 1.4749073637206092 + YPWP{I|L}N 3.939 + + 165 + 1 1.715 73406.6 1.0 14626 5871 20497 HBL1_DMSO_200M_050219_1,20499 HBL1_DMSO_200M_050219_1,20499,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20500 99.935 59.0 1579600.0 25 0 149090.0 + 45648 YVPPELITL 9 107 522.8023158490721 1043.590078764944 2 522.8028442263603 MULTI CID FTMS 0 0 0 20497 791535.875 0.4867676984157244 -3 0.2041091918945312 3 Unmodified _YVPPELITL_ ENSG00000119718|ENST00000266126|EIF2B2;ENST00000556668.1_1_14:75473249-75475888:+|nuORF 42.09456458481378 0.0639583784996157 3 {[QN]|[E{I|L}]|[KN]}PP{I|L}YVT{I|L} 9 5 + 46.265 0.0 0.0 4.4332 4.4332 73.785 0.0 0.0 0.0 9.208187539523742 1.933115814076345 1.933115814076345 1.933115814076345 0 0.8182503180159344 1.3010299956639813 0.0 0.0 {[QN]|[E{I|L}]|[KN]}PP{I|L}YVT{I|L};{[QN]|[E{I|L}]|[KN]}PP{I|L}T{I|L}[YV];{[QN]|[E{I|L}]|[KN]}PPYV{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}PPVY{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}PPY{I|L}VT{I|L};[EP]P{I|L}{I|L}YVT{I|L};[EP]P{I|L}{I|L}T{I|L}[YV];[EP]{I|L}P{I|L}YVT{I|L};[EP]P{I|L}YV{I|L}T{I|L};[EP]P{I|L}VY{I|L}T{I|L} 4.4332;4.248;4.1448;3.976;3.8563;3.5509;3.3656;3.2624;3.2624;3.0937 -;-;-;-;-;-;-;-;-;- 692 1 1.715 77983.3 1.0 14627 5871 20497 HBL1_DMSO_200M_050219_1,20500 HBL1_DMSO_200M_050219_1,20500,YVPPELITL True True YVPPELITL 99.934888 522.80284422636 14631523.0 20497.0 ENST00000556668.1_1_14:75473249-75475888:+|nuORF;;ENSG00000119718|ENST00000266126|EIF2B2 5.217654228210449 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20501 99.937 106.0 1441900.0 25 0 176610.0 + 22525 LPWESMPSL 9 94 1059.5157908336737 1058.5085143670735 1 1059.518725574017 MULTI CID FTMS 0 0 0 20497 657048.6875 0.7911037374548952 -3 0.2041091918945312 4 Unmodified _LPWESMPSL_ ENSG00000135476|ENST00000257934|ESPL1;nc|ENSG00000135476|Q14674-2|ESPL1 96.28474662873226 0.0124266067997264 3 [{I|L}P]WESMPS{I|L} 9 0 + 89.056 0.0 0.0 8.4134 8.4134 92.052 0.0 0.0 0.0 7.887254899964361 14.973024840566469 7.887254899964361 7.887254899964361 0 1.66944517631652 1.5228787452803376 1.4559771852360797 0.0 + + [{I|L}P]WESMPS{I|L};[WP]E{I|L}SMPS{I|L};[WP]{I|L}ESMPS{I|L};[{I|L}P]WTDMPS{I|L};[WP]ES{I|L}MPS{I|L};[WP]ESM{I|L}PS{I|L};[{I|L}P]WEA{M(Oxidation (M))|F}PS{I|L};[WP]{I|L}TDMPS{I|L};[WP]TD{I|L}MPS{I|L};[WP]TDM{I|L}PS{I|L} 8.4134;7.6682;7.6566;7.615;7.4591;7.1223;7.047;6.8582;6.7988;6.462 +;-;-;-;-;-;-;-;-;- + 2379 1 1.715 100968.8 1.0 14628 5871 20497 HBL1_DMSO_200M_050219_1,20501 HBL1_DMSO_200M_050219_1,20501,LPWESMPSL True True LPWESMPSL 99.937177 1059.51872557402 12339265.0 20497.0 nc|ENSG00000135476|Q14674-2|ESPL1;;ENSG00000135476|ENST00000257934|ESPL1 6.886460622151692 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20502 99.94 136.0 583870.0 25 0 50874.0 31767 RSEFNDAIV 9 108 525.7661510280751 1049.51774912295 2 525.7664062380791 MULTI CID FTMS 0 0 0 20497 491545.125 0.4772884011359683 1 -0.0418853759765625 5 Unmodified _RSEFNDAIV_ ENSG00000215041|ENST00000399464|NEURL4;nc|ENSG00000215041|Q96JN8-2|NEURL4 22.736283301280096 0.2418982879461534 3 [QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 6 6 50.634 0.0 0.0 4.8245 0.0 0.0 0.0 298.1752957492543 298.1752957492543 27.37955623032985 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 1.066901560044258 [QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 4.8245 - 458 1 1.715 72149.0 1.0 14629 5871 20497 HBL1_DMSO_200M_050219_1,20502 HBL1_DMSO_200M_050219_1,20502,RSEFNDAIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20503 99.943 145.0 868400.0 25 0 125140.0 + 16448 KAIEVLLTL 9 122 500.3260045775757 998.6374562219512 2 500.3260681033134 MULTI CID FTMS 0 0 0 20497 428820.03125 0.1703141494937283 -5 0.3096389770507812 6 Unmodified _KAIEVLLTL_ ENSG00000163507|ENST00000295746|CIP2A;ENST00000487834.5_1_3:108281971-108308222:-|nuORF;nc|ENSG00000163507|Q8TCG1-2|CIP2A 82.5293158979368 0.0169039238599547 3 [{I|L}T]{I|L}NV{I|L}{I|L}T{I|L} 9 3 + 93.499 0.0 0.0 9.3626 9.3626 92.509 0.0 0.0 0.0 7.369543127670909 16.478174818886373 7.369543127670909 7.167730834301068 0 0.805462187404089 1.5228787452803376 2.037241702187095 0.0 [{I|L}T]{I|L}NV{I|L}{I|L}T{I|L};[{I|L}T]{I|L}VN{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}VAK{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}AVK{I|L}{I|L}T{I|L};[{I|L}T]{I|L}GGV{I|L}{I|L}T{I|L};[{I|L}T]{I|L}N{I|L}V{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}AKV{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{I|L}NV{I|L}T{I|L};[{I|L}T]{I|L}NV{I|L}T{I|L}{I|L};[{I|L}A]EVK{I|L}{I|L}T{I|L} 9.3626;8.6449;8.6247;8.4484;8.4406;8.3736;8.2106;7.9115;7.8562;7.7942 -;-;-;-;-;-;-;-;-;- 10528 1 1.715 98071.0 1.0 14630 5871 20497 HBL1_DMSO_200M_050219_1,20503 HBL1_DMSO_200M_050219_1,20503,KAIEVLLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20504 99.95 401.0 352740.0 25 0 36093.0 + 12100 GQIDSIHLLL 10 149 554.8217089229491 1107.6288649126982 2 554.8218261599541 MULTI CID FTMS 0 0 0 20497 182993.390625 0.808608023390826 -3 0.2041091918945312 7 Unmodified _GQIDSIHLLL_ ENSG00000066739|ENST00000359933|ATG2B 62.57269311338072 0.0298375429882549 3 [H{I|L}]SD{I|L}{I|L}{I|L} 7 5 52.472 0.0 0.0 4.7373 0.0 0.0 0.0 313.149933019928 313.149933019928 5.159488615773213 0.0 0.0 0.0 0 0.0 0.7958800173440752 1.2786596949921218 0.0 [H{I|L}]SD{I|L}{I|L}{I|L} 4.7373 - 1941 1 1.715 113089.4 1.0 14631 5871 20497 HBL1_DMSO_200M_050219_1,20504 HBL1_DMSO_200M_050219_1,20504,GQIDSIHLLL True True GQIDSIHLLL 99.950027 554.821826159954 2024504.5 20497.0 ENSG00000066739|ENST00000359933|ATG2B 4.240062554677327 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20505 99.957 372.0 560610.0 25 0 38986.0 + 24525 MISELLPLN 9 155 515.2868147963536 1028.5590766595071 2 515.2864868044853 MULTI CID FTMS 0 0 0 20497 137143.0625 0.1616517275155412 -5 0.3096389770507812 8 Unmodified _MISELLPLN_ REV__ENST00000066544.7_1_17:45197960-45198047:-|nuORF 64.23631603340823 0.0237365939569086 3 {[QN]|[E{I|L}]|[KN]}S{I|L}M{I|L} 6 -1 49.319 0.0 0.0 4.7949 0.0 0.0 0.0 339.1683655601509 339.1683655601509 11.177637993384836 0.0 0.0 0.0 0 1.035666875892183 1.2218487496163564 1.5044321917401078 0.0 {[QN]|[E{I|L}]|[KN]}S{I|L}M{I|L} 4.7949 - 3344 1 1.715 165738.6 1.0 14632 5871 20497 HBL1_DMSO_200M_050219_1,20505 HBL1_DMSO_200M_050219_1,20505,MISELLPLN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20506 99.967 560.0 288200.0 25 0 36060.0 17378 KMEQLFLQL 9 139 575.3189089163769 1148.6232648995538 2 575.3188964724541 MULTI CID FTMS 0 0 0 20497 127099.75 0.2917372603556458 -4 0.2770919799804687 9 Unmodified _KMEQLFLQL_ ENSG00000167842|ENST00000611091|MIS12 69.10491478415734 0.0214449631113747 3 [AG]PQY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L} 10 4 + 63.439 0.0 0.0 5.523 5.523 75.494 0.0 0.0 0.0 2.853057777312827 9.699915470362017 2.853057777312827 0.7918124604762511 0 0.8539171939081173 1.5228787452803376 0.0 0.903598431600422 [AG]PQY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]{I|L}{M(Oxidation (M))|F}Q{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]PQ{I|L}Y{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]QPY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}]{M(Oxidation (M))|F}Q{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]QP{I|L}Y{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]PQ{I|L}{M(Oxidation (M))|F}Y{I|L}Q{I|L};[AG]PYQ{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]PQY{M(Oxidation (M))|F}{I|L}{I|L}Q{I|L};[AG]QP{I|L}{M(Oxidation (M))|F}Y{I|L}Q{I|L} 5.523;5.4541;5.4031;5.3008;5.2746;5.1809;4.9778;4.8456;4.7713;4.7555 -;-;-;-;-;-;-;-;-;- 2019 1 1.715 121757.4 1.0 14633 5871 20497 HBL1_DMSO_200M_050219_1,20506 HBL1_DMSO_200M_050219_1,20506,KMEQLFLQL True True YPQQIFIQI 99.966556 575.318896472454 4147092.5 20497.0 ENSG00000105173|ENST00000262643|CCNE1;;nc|ENSG00000105173|P24864-2|CCNE1;;nc|ENSG00000105173|P24864-3|CCNE1 4.639446417490642 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20508 99.976 428.0 470320.0 25 0 58216.0 + 1863 ALVPVFAHL 9 122 483.7922416384986 965.5699303437972 2 483.7929260134697 MULTI CID FTMS 0 0 0 20507 224441.1875 0.0758611568021602 -4 0.2459945678710937 1 Unmodified _ALVPVFAHL_ ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 56.04830969593885 0.0282699710924866 3 [{I|L}A]VPV{M(Oxidation (M))|F}AH{I|L} 9 0 + 73.862 0.0 0.0 7.6495 7.6495 87.909 0.0 0.0 0.0 20.08380758535916 4.771212547196626 4.771212547196626 4.771212547196626 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + + [{I|L}A]VPV{M(Oxidation (M))|F}AH{I|L};[{I|L}A]VPV{M(Oxidation (M))|F}A{I|L}H;[{I|L}A]V{I|L}{[ET]|[MV]}AH{I|L};[{I|L}A]V{I|L}{[ET]|[MV]}A{I|L}H;[{I|L}A]VMV{I|L}AH{I|L};[{I|L}A]VMV{I|L}A{I|L}H;[{I|L}A]V[QA][KS]H{I|L};[{I|L}A]VPV[PG][WK];[{I|L}A]V[QA][KS]{I|L}H;[{I|L}A]V{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}GP{I|L} 7.6495;7.1554;6.6653;6.1712;6.1625;5.6683;4.2056;4.1249;3.7115;3.5543 +;-;-;-;-;-;-;-;-;- + 732 + 1 1.715 156911.1 1.0 14634 5872 20507 HBL1_DMSO_200M_050219_1,20508 HBL1_DMSO_200M_050219_1,20508,ALVPVFAHL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20509 99.978 95.0 1070400.0 25 0 152760.0 + 16220 IVLPEDLQL 9 119 520.3051862679811 1038.595819602762 2 520.3055908083916 MULTI CID FTMS 0 0 0 20507 425250.53125 0.137347713591375 -4 0.2459945678710937 2 Unmodified _IVLPEDLQL_ ENSG00000115392|ENST00000233741|FANCL;nc|ENSG00000115392|Q9NW38-2|FANCL 44.40701690623563 0.0526327925666318 3 [EP]D{I|L}{I|L}V 6 5 32.681 0.0 0.0 3.1467 0.0 0.0 0.0 369.21261367316055 369.21261367316055 2.4915968663680204 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3807196863200844 0.0 [EP]D{I|L}{I|L}V 3.1467 - 804 1 1.715 80116.4 1.0 14635 5872 20507 HBL1_DMSO_200M_050219_1,20509 HBL1_DMSO_200M_050219_1,20509,IVLPEDLQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20510 99.985 339.0 632230.0 25 0 33358.0 + 40450 VILGTGELYL 10 121 1077.6196696853283 1076.6123932187286 1 1077.627001941204 MULTI CID FTMS 0 0 0 20507 222999.09375 0.6431753776755407 -3 0.1910858154296875 3 Unmodified _VILGTGELYL_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000586276.5_1_17:42931463-42937758:-|nuORF;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;ENST00000590977.5_1_17:42931463-42936567:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 120.45040980043947 0.0005194371852953 3 [{I|L}V]{I|L}GTGE{I|L}Y{I|L} 10 0 + 82.474 0.0 0.0 7.6605 7.6605 82.074 0.0 0.0 0.0 6.456808880866305 15.026975159433547 6.456808880866305 0.9683996375752456 0 1.394599018282542 1.3979400086720375 1.9634679910804405 0.0 + + [{I|L}V]{I|L}GTGE{I|L}Y{I|L};[{I|L}V]{I|L}GTW{I|L}Y{I|L};[{I|L}V]GT{I|L}GE{I|L}Y{I|L};[{I|L}V]GT{I|L}W{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}GTG{I|L}V{I|L}Y{I|L};[{I|L}V]GT{[CP]|[EA]}V{I|L}Y{I|L};[{I|L}V]G{I|L}TGE{I|L}Y{I|L};[{I|L}V]G{I|L}TW{I|L}Y{I|L};[{I|L}V]{I|L}GTGEY{I|L}{I|L};[{I|L}V]{I|L}GTWY{I|L}{I|L} 7.6605;7.5706;7.3644;7.2744;7.0608;6.9547;6.9336;6.8437;6.7358;6.6458 +;-;-;-;-;-;-;-;-;- + 6051 1 1.715 134116.9 1.0 14636 5872 20507 HBL1_DMSO_200M_050219_1,20510 HBL1_DMSO_200M_050219_1,20510,VILGTGELYL True True VILGTGELYL 99.984675 1077.6270019412 3544305.5 20507.0 ENST00000590977.5_1_17:42931463-42936567:-|nuORF;;ENST00000586276.5_1_17:42931463-42937758:-|nuORF;;nc|ENSG00000108883|Q15029-3|EFTUD2;;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 6.023499647776286 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20511 99.988 166.0 672290.0 25 0 86254.0 + 22526 LPWESMPSL 9 135 530.2627216086463 1058.5108902840925 2 530.2632934451103 MULTI CID FTMS 0 0 0 20507 173797.5 0.2567364038678309 -2 0.1531448364257812 4 Unmodified _LPWESMPSL_ ENSG00000135476|ENST00000257934|ESPL1;nc|ENSG00000135476|Q14674-2|ESPL1 70.71552829651908 0.0208223590022201 3 [PS]MPS{I|L}M 7 4 47.197 0.0 0.0 4.4588 0.0 0.0 0.0 312.1554713095612 312.1554713095612 25.315887096580973 0.0 0.0 0.0 0 0.5 1.0 1.524227503252014 0.0 [PS]MPS{I|L}M 4.4588 - 1863 1 1.715 103671.7 1.0 14637 5872 20507 HBL1_DMSO_200M_050219_1,20511 HBL1_DMSO_200M_050219_1,20511,LPWESMPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20512 99.992 208.0 658700.0 25 0 46922.0 22936 LSEMIQFY 8 124 515.7508699604751 1029.4871869877502 2 515.7521850466728 MULTI CID FTMS 0 0 0 20507 125139.9296875 1.0 0 0.0 5 Unmodified _LSEMIQFY_ ENSG00000136634|ENST00000423557|IL10;ENST00000367099.3_1_1:206943020-206944398:-|nuORF 28.486842064014134 0.4448922141344407 3 {[TV]|[{I|L}S]}E{I|L}M{I|L} 6 4 43.183 0.0 0.0 4.1946 0.0 0.0 0.0 340.0945837985502 340.0945837985502 4.131806016604351 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.4476212463643423 0.0 {[TV]|[{I|L}S]}E{I|L}M{I|L} 4.1946 - 1341 1 1.715 110706.2 1.0 14638 5872 20507 HBL1_DMSO_200M_050219_1,20512 HBL1_DMSO_200M_050219_1,20512,LSEMIQFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20514 99.996 8.3 7883100.0 25 0 1142000.0 + 1814 ALTELLAKI 9 81 486.3103788438592 970.6062047545184 2 486.3106567263603 MULTI CID FTMS 0 0 0 20513 8222046.0 0.2415196299547524 6 -0.4031448364257812 1 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 81.89019881105858 0.0170587746866453 3 [{I|L}A]TE{I|L}{I|L}AK{I|L} 9 0 + 85.116 0.0 0.0 8.7694 8.7694 88.312 0.0 0.0 0.0 26.28653141768609 3.679767852945943 3.679767852945943 3.679767852945943 0 1.566901560044258 2.0 0.0 0.2614393726401688 + + [{I|L}A]TE{I|L}{I|L}AK{I|L};[{I|L}A]TE{I|L}{I|L}A{I|L}K 8.7694;8.3903 +;- + 429 + 1 1.71 56570.5 1.0 14639 5873 20513 HBL1_DMSO_200M_050219_1,20514 HBL1_DMSO_200M_050219_1,20514,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20515 100.0 381.0 254210.0 25 0 29974.0 + 21103 LPALFRDI 8 88 472.78183582869104 943.549118724182 2 472.7814514040947 MULTI CID FTMS 0 0 0 20513 269794.28125 0.7797026110602604 -1 0.02532958984375 2 Unmodified _LPALFRDI_ ENSG00000141456|ENST00000572293|PELP1 29.081581746732265 0.4323690340403521 3 {I|L}PA{I|L}{M(Oxidation (M))|F}[RD]{I|L} 8 0 + 64.768 0.0 0.0 6.8643 6.8643 84.629 0.0 0.0 0.0 48.314795068986 2.596373105057566 2.596373105057566 3.735806628125936 0 0.8807196863200843 1.5228787452803376 0.0 0.0 + + {I|L}PA{I|L}{M(Oxidation (M))|F}[RD]{I|L};{I|L}PA{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}V;{I|L}P{I|L}A{M(Oxidation (M))|F}[RD]{I|L};{I|L}P{I|L}A{M(Oxidation (M))|F}{[RE]|[WV]}V;{I|L}{I|L}PA{M(Oxidation (M))|F}[RD]{I|L};{I|L}{I|L}PA{M(Oxidation (M))|F}{[RE]|[WV]}V 6.8643;6.4684;6.4655;6.0696;4.4994;4.1035 +;-;-;-;-;- + 127 + 1 1.71 80962.9 1.0 14640 5873 20513 HBL1_DMSO_200M_050219_1,20515 HBL1_DMSO_200M_050219_1,20515,LPALFRDI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20517 100.02 628.0 207800.0 25 0 23862.0 + 31371 RNSENFWIK 9 155 597.3043046955761 1192.594056457952 2 597.3053466677666 MULTI CID FTMS 0 0 0 20516 215438.984375 1.0 0 0.0 1 Unmodified _RNSENFWIK_ REV__ENSG00000047365|ENST00000303965|ARAP2;REV__ENST00000508066.1_1_4:36162071-36231213:-|nuORF 40.23920728925047 0.0741434193262949 3 {M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}NWK{I|L} 9 -1 + 77.52 0.0 0.0 6.5001 6.5001 85.775 0.0 0.0 0.0 12.25268461881508 5.862657241447309 5.862657241447309 5.862657241447309 0 2.1861818737241734 0.0 0.4247425010840047 0.2059771852360797 {M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}NWK{I|L};{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}NW{I|L}K;{M(Oxidation (M))|F}{I|L}PE{M(Oxidation (M))|F}NWK{I|L};{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}GGWK{I|L};{M(Oxidation (M))|F}{I|L}PE{M(Oxidation (M))|F}NW{I|L}K;{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}GGW{I|L}K;{M(Oxidation (M))|F}{I|L}PE{M(Oxidation (M))|F}GGWK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E[HV]{I|L}P{I|L}E;{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}[HV]{I|L}{I|L}PE;{M(Oxidation (M))|F}{I|L}PE{M(Oxidation (M))|F}GGW{I|L}K 6.5001;6.0085;5.9285;5.728;5.4369;5.2364;5.1563;4.7407;4.712;4.6648 -;-;-;-;-;-;-;-;-;- 3105 + 1 1.71 100042.4 1.0 14641 5874 20516 HBL1_DMSO_200M_050219_1,20517 HBL1_DMSO_200M_050219_1,20517,RNSENFWIK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20518 100.02 150.0 575050.0 25 0 38276.0 + 22881 GLVASLISV 9 102 857.531130777804 856.523854311204 1 858.5299560427666 MULTI CID FTMS 0 0 0 20516 280373.5 0.6498454399684318 -1 0.011138916015625 2 Unmodified _LSAVGRRV_ ENSG00000136824|ENST00000374793|SMC2;nc|ENSG00000136824|O95347-2|SMC2 24.67388899826682 0.525179942228231 3 {[VA]|[{I|L}G]}VTG{I|L}{I|L}S 8 6 40.342 0.0 0.0 4.71 0.0 0.0 0.0 113.06068240354072 113.06068240354072 15.878362875565202 0.0 0.0 0.0 0 0.0 0.0 2.1237125054200234 0.0 {[VA]|[{I|L}G]}VTG{I|L}{I|L}S 4.71 - 2241 1 1.71 60043.8 1.0 14642 5874 20516 HBL1_DMSO_200M_050219_1,20518 HBL1_DMSO_200M_050219_1,20518,LSAVGRRV False False GLVASLISV 100.01925 858.529956042767 4466250.0 20516.0 ENSG00000136824|ENST00000374793|SMC2;;nc|ENSG00000136824|O95347-2|SMC2 2.465864141782125 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20519 100.02 281.0 333620.0 25 0 24483.0 + 37643 TLLRLLYEA 9 122 546.3265351617665 1090.638517390333 2 546.3273193240166 MULTI CID FTMS 0 0 0 20516 251809.28125 0.2222154596427519 9 -0.6156768798828125 3 Unmodified _TLLRLLYEA_ ENSG00000149100|ENST00000531120|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF;nc|ENSG00000149100|Q7L2H7-2|EIF3M 40.23920728925047 0.0741434193262949 3 [{I|L}T][R{I|L}]{I|L}{I|L}YEA 9 0 + 56.694 0.0 0.0 5.1983 5.1983 83.694 0.0 0.0 0.0 20.737862141609185 26.283573163448963 20.737862141609185 8.45098040014257 0 0.6643943297944485 2.0 0.1923877696554315 0.3054621874040891 + + [{I|L}T][R{I|L}]{I|L}{I|L}YEA;[{I|L}T][R{I|L}]{I|L}Y{I|L}EA;[{I|L}T][R{I|L}]{I|L}{I|L}EYA;[{I|L}T][R{I|L}]{I|L}Y{[CP]|[EA]}{I|L} 5.1983;4.4234;4.2037;2.599 +;-;-;- + 401 1 1.71 77642.4 1.0 14643 5874 20516 HBL1_DMSO_200M_050219_1,20519 HBL1_DMSO_200M_050219_1,20519,TLLRLLYEA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20520 100.03 187.0 300790.0 25 0 55144.0 + 22678 LPYVKPAT 8 81 888.5190364654884 887.5117599988884 1 890.5247680544853 MULTI CID FTMS 0 0 0 20516 202815.609375 0.8682641411671499 4 -0.3805007934570312 4 Unmodified _LPYVKPAT_ REV__CON__ENSEMBL:ENSBTAP00000024462;REV__CON__ENSEMBL:ENSBTAP00000024466 11.114462752807354 0.7467182956244686 3 VGNPK 5 -1 30.662 0.0 0.0 3.4548 0.0 0.0 374.203437239572 0.0 374.203437239572 0.0 9.338162265355407 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 VGNPK 3.4548 - 336 1 1.71 43355.8 1.0 14644 5874 20516 HBL1_DMSO_200M_050219_1,20520 HBL1_DMSO_200M_050219_1,20520,LPYVKPAT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20521 100.04 800.0 234360.0 25 0 18158.0 + 24375 MFIDTVISSY 10 164 588.2861046450578 1174.5576563569157 2 588.2859985232353 MULTI CID FTMS 0 0 0 20516 209792.125 0.6500682085966846 -1 0.011138916015625 5 Unmodified _MFIDTVISSY_ ENSG00000133863|ENST00000643185|TEX15;nc|ENSG00000133863|Q9BXT5|TEX15 71.13359017698441 0.0189001043006994 3 [EP]E{I|L}VT[HT]SY 10 7 [EP]E{I|L} + + 37.893 6.9073 1.4752 3.2261 3.2261 50.618 0.0 0.0 0.0 0.0 -1.3748263432996453 -1.3748263432996453 0.0 0 0.25 0.0 1.325257498915995 0.0 [EP]E{I|L}VT[HT]SY 3.2261 - 3151 + 1 1.71 138554.9 0.6800000071525574 14645 5874 20516 HBL1_DMSO_200M_050219_1,20521 HBL1_DMSO_200M_050219_1,20521,MFIDTVISSY True True MFIDTVISSY 100.04188 588.285998523235 2507065.25 20516.0 ENSG00000133863|ENST00000643185|TEX15;;nc|ENSG00000133863|Q9BXT5|TEX15 6.590872446695964 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20522 100.06 800.0 186850.0 25 0 23665.0 + 22674 LPYVGMVTI 9 141 496.7779605598245 991.5413681864492 2 496.7785827517509 MULTI CID FTMS 0 0 0 20516 179114.53125 1.0 0 0.0 6 Unmodified _LPYVGMVTI_ ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF 70.86452775946826 0.0207647612749057 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VGM{I|L}S{I|L}{I|L} 9 4 + 76.921 0.0 0.0 7.7578 7.7578 82.476 0.0 0.0 0.0 9.058575521858302 14.973024840566469 9.058575521858302 1.064921830680703 0 0.4247425010840047 1.2218487496163564 0.8851518780601924 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VGM{I|L}S{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VGM{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VGMVT{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VGMV{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VG{I|L}MS{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VG{I|L}MVT{I|L};[{I|L}T]VCM{I|L}S{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GMS{I|L}{I|L};[{I|L}T]VCM{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GMVT{I|L} 7.7578;7.6504;7.4542;7.3468;7.2766;7.1692;6.8442;6.7954;6.7368;6.688 -;-;-;-;-;-;-;-;-;- 2673 1 1.71 115560.6 0.5799999833106995 14646 5874 20516 HBL1_DMSO_200M_050219_1,20522 HBL1_DMSO_200M_050219_1,20522,LPYVGMVTI True True LPYVGMVTI 100.0557 496.778582751751 1451122.375 20516.0 ENST00000591406.1_1_18:56822908-56825914:+|nuORF;;ENSG00000166562|ENST00000587834|SEC11C 4.469369570414226 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20523 100.06 190.0 323040.0 25 0 69000.0 + 45667 LPPPFVPTL 9 63 980.492031135589 979.4847546689888 1 980.4918090701104 MULTI CID FTMS 0 0 0 20516 120569.6171875 0.9284467422960374 6 -0.4573593139648437 7 Unmodified _YVTEADLVA_ ENSG00000123143|ENST00000242783|PKN1;ENST00000585839.5_1_19:14580313-14582593:+|nuORF;nc|ENSG00000123143|Q16512-2|PKN1 23.1484247019978 0.2366544122328345 3 [{I|L}P]MV{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}AV 9 8 + 40.428 0.0 0.0 4.1275 4.1275 76.491 0.0 0.0 0.0 21.280994675737755 2.8034914120252097 2.8034914120252097 4.387116332977705 0 0.0 1.5228787452803376 0.3807196863200844 0.0 [{I|L}P]MV{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}AV;[{I|L}P]MP[HC]{I|L}AV;[{I|L}P]MV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YV;[{I|L}P]MGM[YV]AV;[{I|L}P]MV[YN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}P]MGM{[VA]|[{I|L}G]}YV;[{I|L}P]M[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}AV;[{I|L}P][HD]{[ES]|[DT]|[{I|L}C]}{I|L}AV;[{I|L}P]MG[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}AV;[{I|L}P]MG[YR]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.1275;3.6796;3.5339;3.4998;3.3815;3.0935;3.0774;3.0265;2.9443;2.5871 -;-;-;-;-;-;-;-;-;- 419 1 1.71 49293.2 1.0 14647 5874 20516 HBL1_DMSO_200M_050219_1,20523 HBL1_DMSO_200M_050219_1,20523,YVTEADLVA False False LPPPFVPTL 100.0594 980.49180907011 1136437.25 20516.0 ENSG00000123143|ENST00000242783|PKN1;;ENST00000585839.5_1_19:14580313-14582593:+|nuORF;;nc|ENSG00000123143|Q16512-2|PKN1 0.4460533857345581 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20524 100.07 800.0 144750.0 25 0 8628.9 + 27379 PIEFYYGK 8 165 339.50710786353267 1015.499494190798 3 339.5068237185478 MULTI CID FTMS 0 0 0 20516 120584.0546875 1.0 0 0.0 8 Unmodified _PIEFYYGK_ REV__ENSG00000007402|ENST00000424201|CACNA2D2;REV__nc|ENSG00000007402|Q9NY47-3|CACNA2D2;REV__nc|ENSG00000007402|Q9NY47-4|CACNA2D2;REV__nc|ENSG00000007402|Q9NY47-5|CACNA2D2;REV__nc|ENSG00000007402|Q9NY47|CACNA2D2 10.183394434864962 0.7604730176254005 3 [{I|L}P]Q 3 -1 20.29 0.0 0.0 1.9981 0.0 0.0 0.0 674.2748617228207 674.2748617228207 11.070006276765485 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}P]Q 1.9981 - 65 1 1.71 94462.6 0.4199999868869781 14648 5874 20516 HBL1_DMSO_200M_050219_1,20524 HBL1_DMSO_200M_050219_1,20524,PIEFYYGK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20525 100.09 800.0 229610.0 25 0 30572.0 + 40743 VLIKMKLHR 9 153 379.91344363927726 1136.718501518032 3 380.2480041384697 MULTI CID FTMS 0 0 0 20516 113741.703125 1.0 0 0.0 9 Unmodified _VLIKMKLHR_ REV__ENST00000229179.8_1_12:69082797-69084434:+|nuORF;REV__ENST00000540453.5_1_12:69082797-69083453:+|nuORF 10.799506525563784 0.5443532743200366 3 {I|L}{I|L}HR 4 -1 48.404 0.0 0.0 4.2582 0.0 0.0 599.3790971175068 0.0 599.3790971175068 0.0 38.94016261540408 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.872363747448347 {I|L}{I|L}HR 4.2582 - 87 + 1 1.71 145432.3 0.4000000059604645 14649 5874 20516 HBL1_DMSO_200M_050219_1,20525 HBL1_DMSO_200M_050219_1,20525,VLIKMKLHR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20526 100.1 800.0 187210.0 25 0 23595.0 + 45156 YQFNPMESIKL 11 151 685.3447581837006 1368.6749634342011 2 685.3442870974541 MULTI CID FTMS 0 0 0 20516 102681.90625 0.4120191246975598 -2 0.036468505859375 10 Unmodified _YQFNPMESIKL_ ENSG00000137965|ENST00000370747|IFI44;ENST00000495254.5_1_1:79119932-79128426:+|nuORF 83.6515911177208 0.0049409606751671 3 YQ{M(Oxidation (M))|F}GGPMES{I|L}K{I|L} 12 2 + 93.772 0.0 0.0 6.8513 6.8513 84.423 0.0 0.0 0.0 56.85636253256132 11.611814434466195 11.611814434466195 3.601514477826385 0 1.5189301784845295 1.2218487496163564 1.174742501084005 0.7887254899964358 YQ{M(Oxidation (M))|F}GGPMES{I|L}K{I|L};YQ{M(Oxidation (M))|F}NPMES{I|L}K{I|L};YQ{M(Oxidation (M))|F}GGPME[K{I|L}]S{I|L};Y[AG]{M(Oxidation (M))|F}GGPMES{I|L}K{I|L};YQ{M(Oxidation (M))|F}NPME[K{I|L}]S{I|L};YQ{M(Oxidation (M))|F}GGPME[K{I|L}]TV;Y[AG]{M(Oxidation (M))|F}NPMES{I|L}K{I|L};YQ{M(Oxidation (M))|F}NPME[K{I|L}]TV;YQ{M(Oxidation (M))|F}GGP[R{M(Oxidation (M))|F}]{[RE]|[WV]}{I|L};YQ{M(Oxidation (M))|F}NP[R{M(Oxidation (M))|F}]{[RE]|[WV]}{I|L} 6.8513;6.5882;5.4269;5.2938;5.1637;5.1117;5.0285;4.8486;4.4254;4.1649 -;+;-;-;-;-;-;-;-;- + 3572 + 1 1.71 109270.2 0.5400000214576721 14650 5874 20516 HBL1_DMSO_200M_050219_1,20526 HBL1_DMSO_200M_050219_1,20526,YQFNPMESIKL True True YQFNPMESIKL 100.10204 685.344287097454 4242919.5 20516.0 ENST00000495254.5_1_1:79119932-79128426:+|nuORF;;ENSG00000137965|ENST00000370747|IFI44 7.79928716023763 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20527 100.11 273.0 349430.0 25 0 44967.0 + 14153 ICYCAGAGIVL 11 140 541.7723604920276 1081.530168050855 2 541.7718383669853 MULTI CID FTMS 0 0 0 20516 109255.8515625 0.4997064239065845 -1 0.011138916015625 11 Unmodified _ICYCAGAGIVL_ REV__ENSG00000102401|ENST00000471229|ARMCX3 21.74664581756881 0.5815847713327531 3 [QA]AVYCC{I|L}{I|L}V 10 -1 [QA]AVYCC{I|L} + + 19.196 8.9924 1.0562 1.7749 1.7749 48.687 0.0 0.0 0.0 0.0 1.0055139284569634 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [QA]AVYCC{I|L}{I|L}V 1.7749 - 660 + 1 1.71 78149.0 1.0 14651 5874 20516 HBL1_DMSO_200M_050219_1,20527 HBL1_DMSO_200M_050219_1,20527,ICYCAGAGIVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20528 100.12 800.0 205520.0 25 0 13556.0 + 10127 FPWPKVLKI 9 163 564.3527799952674 1126.691007057335 2 564.3528930544853 MULTI CID FTMS 0 0 0 20516 96182.59375 0.3034880024422268 -15 1.1903915405273438 12 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 67.83816525789305 0.0219346420158844 3 {I|L}MWPKV{I|L}K{I|L} 9 2 + 81.839 0.0 0.0 7.2637 7.2637 92.49 0.0 0.0 0.0 16.989700043360187 10.039689767179851 10.039689767179851 10.039689767179851 0 1.872363747448347 2.0 0.0 0.4802046884880938 {I|L}MWPKV{I|L}K{I|L};{I|L}MWPKV{I|L}{I|L}K;{M(Oxidation (M))|F}PWPKV{I|L}K{I|L};[WP]KV{I|L}KP{M(Oxidation (M))|F}{I|L};[WP]KV{I|L}M{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K;[WP]KV{I|L}P{M(Oxidation (M))|F}K{I|L};[WP]KV{I|L}PK{M(Oxidation (M))|F}{I|L};[WP]KVP{M(Oxidation (M))|F}{I|L}K{I|L};[WP]KVP{I|L}{M(Oxidation (M))|F}K{I|L} 7.2637;6.3726;5.7557;5.0657;4.8844;4.8647;4.6638;4.5314;3.9969;3.7762 -;-;+;-;-;-;-;-;-;- + 1700 + 1 1.71 129027.6 0.5199999809265137 14652 5874 20516 HBL1_DMSO_200M_050219_1,20528 HBL1_DMSO_200M_050219_1,20528,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20529 100.13 170.0 378200.0 25 0 53213.0 + + 37168 KTIDYIQFL 9 89 570.8184706065383 1139.6223882798763 2 570.8183471560478 MULTI CID FTMS 0 0 0 20516 95293.46875 0.1680067282226682 -2 0.036468505859375 13 Unmodified _TIDKYLQIF_ ENST00000588320.1_1_17:40720799-40723580:+|nuORF;ENSG00000108788|ENST00000435881|MLX;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 49.93300154707207 0.0405168250806675 3 [{I|L}T]KDY{I|L}Q{M(Oxidation (M))|F}{I|L} 9 -1 + 79.689 0.0 0.0 6.9926 6.9926 90.762 0.0 0.0 0.0 12.03447425662482 16.478174818886373 12.03447425662482 9.208187539523747 0 0.5 1.3010299956639813 1.360924374808178 0.4247425010840047 [{I|L}T]KDY{I|L}Q{M(Oxidation (M))|F}{I|L};[{I|L}T]KDY{I|L}[AG]{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[KS]Y{I|L}Q{M(Oxidation (M))|F}{I|L};[{I|L}T]KDY{I|L}{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}[KS]Y{I|L}[AG]{M(Oxidation (M))|F}{I|L};[{I|L}T]KD{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L};{[ET]|[MV]}{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}Q{M(Oxidation (M))|F}{I|L};[{I|L}T]KDY{I|L}{M(Oxidation (M))|F}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[KS]Y{I|L}{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}[KS]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L} 6.9926;6.1846;5.9366;5.3675;5.1286;5.0406;4.574;4.5595;4.3115;3.9846 -;-;-;-;-;-;-;-;-;- 456 1 1.71 54050.8 1.0 14653 5874 20516 HBL1_DMSO_200M_050219_1,20529 HBL1_DMSO_200M_050219_1,20529,TIDKYLQIF False False KTIDYIQFL 100.12542 570.818347156048 8427702.0 20516.0 ENST00000588320.1_1_17:40720799-40723580:+|nuORF;;ENSG00000108788|ENST00000435881|MLX;;nc|ENSG00000108788|Q9UH92-2|MLX;;nc|ENSG00000108788|Q9UH92|MLX 1.677693823973338 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20531 100.13 98.0 750130.0 25 0 112870.0 + 21627 LPLAHVLEL 9 91 502.8102516002017 1003.6059502672034 2 502.8099243044853 MULTI CID FTMS 0 0 0 20530 513488.90625 0.275466813344067 8 -0.4932098388671875 1 Unmodified _LPLAHVLEL_ ENSG00000068366|ENST00000672401|ACSL4;ENSG00000123983|ENST00000357430|ACSL3;nc|ENSG00000068366|O60488|ACSL4 60.38955033654506 0.025866396858536 3 [{I|L}P][HA]V{I|L}E{I|L}{I|L} 9 2 + 60.64 0.0 0.0 6.0422 6.0422 79.003 0.0 0.0 0.0 0.7821840590102624 36.53598431600422 0.7821840590102624 1.8297591317234208 0 1.079689690656103 1.6989700043360187 0.0 0.0 [{I|L}P][HA]V{I|L}E{I|L}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L};[{I|L}P][HA]{I|L}VE{I|L}{I|L};[{I|L}P][HA]V{I|L}{I|L}E{I|L};{I|L}{M(Oxidation (M))|F}{I|L}V{[WT]|[RM]}{I|L}{I|L};[{I|L}P][HA]{I|L}V{I|L}E{I|L};[HV]A{I|L}P{I|L}E{I|L}{I|L};[HV]A{I|L}P{I|L}{I|L}E{I|L};[HA]{I|L}PV{I|L}E{I|L}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}V[W{I|L}]T{I|L} 6.0422;5.8599;5.7423;5.6107;5.5599;5.3107;5.27;4.8385;4.5947;4.5674 -;-;-;-;-;-;-;-;-;- 471 1 1.71 58745.5 1.0 14654 5875 20530 HBL1_DMSO_200M_050219_1,20531 HBL1_DMSO_200M_050219_1,20531,LPLAHVLEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20532 100.13 67.0 974830.0 25 0 84757.0 + 20607 LLPHYPNWF 9 83 593.8057857251362 1185.5970185170722 2 593.8060790896416 MULTI CID FTMS 0 0 0 20530 737748.25 0.7925438926606729 1 -0.1326522827148437 2 Unmodified _LLPHYPNWF_ ENSG00000159596|ENST00000372025|TMEM69 74.39630413441286 0.0193995060682538 3 {I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[NP]W{M(Oxidation (M))|F} 9 0 + 54.49 0.0 0.0 4.596 4.596 83.915 0.0 0.0 0.0 9.75842545998519 9.75842545998519 9.75842545998519 9.75842545998519 0 1.6861818737241734 1.5228787452803376 0.0 1.1307196863200843 + + {I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}P{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}P[NP]W{I|L}{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}[YV]TM{I|L}{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[NP]W{I|L}{I|L}{M(Oxidation (M))|F};[NP]W{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}P[NP]{I|L}{I|L}W{M(Oxidation (M))|F};[NP]YPHW{I|L}{I|L}{M(Oxidation (M))|F};[NP]W[NP]W{I|L}{I|L}{M(Oxidation (M))|F} 4.596;3.7729;3.441;2.8092;2.4799;2.4773;2.3964;2.341;2.1819;2.0645 +;-;-;-;-;-;-;-;-;- + 346 + 1 1.71 55229.7 1.0 14655 5875 20530 HBL1_DMSO_200M_050219_1,20532 HBL1_DMSO_200M_050219_1,20532,LLPHYPNWF True True LLPHYPNWF 100.13159 593.806079089642 16887454.0 20530.0 ENSG00000159596|ENST00000372025|TMEM69 6.667344888051351 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20533 100.13 71.0 996040.0 25 0 119900.0 + 32064 RVLEMLEAL 9 63 537.3047086860663 1072.5948644389323 2 537.3051025271416 MULTI CID FTMS 0 0 0 20530 906768.75 1.0 0 0.0 3 Unmodified _RVLEMLEAL_ ENSG00000150977|ENST00000280571|RILPL2 15.248480904072842 0.4239247793462406 3 {[QN]|[E{I|L}]|[KN]}[RV]M{I|L}EA{I|L} 9 4 + 48.121 0.0 0.0 4.4864 4.4864 86.785 0.0 0.0 0.0 0.915149811213496 31.92348741261036 0.915149811213496 48.12137499549429 0 0.9247425010840048 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[RV]M{I|L}EA{I|L} 4.4864 - 40 1 1.71 57913.7 1.0 14656 5875 20530 HBL1_DMSO_200M_050219_1,20533 HBL1_DMSO_200M_050219_1,20533,RVLEMLEAL False True RVLEMLEAL 100.13327 537.305102527142 8011915.0 20530.0 ENSG00000150977|ENST00000280571|RILPL2 4.580531756083171 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20534 100.14 174.0 384280.0 25 0 49272.0 + 35608 STYKFFEVI 9 91 567.2979615580348 1132.5813701828697 2 567.2977172732353 MULTI CID FTMS 0 0 0 20530 397492.46875 0.0494202698248661 11 -0.6844100952148438 4 Unmodified _STYKFFEVI_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 45.69961567697781 0.0497987121815769 3 [{I|L}P]E{[WT]|[RM]}{M(Oxidation (M))|F}EV{I|L} 9 5 + 43.495 0.0 0.0 3.8403 3.8403 77.518 0.0 0.0 0.0 6.052207222934378 10.330145895351848 6.052207222934378 6.052207222934378 0 0.8182503180159344 1.154901959985743 1.1421590589602533 0.0 [{I|L}P]E{[WT]|[RM]}{M(Oxidation (M))|F}EV{I|L};{[MG]|[TS]}[YK]{M(Oxidation (M))|F}{M(Oxidation (M))|F}EV{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKY{[MG]|[TS]}V{I|L};[{I|L}P]E{[WT]|[RM]}E{M(Oxidation (M))|F}V{I|L};[YK]{[MG]|[TS]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}EV{I|L};[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}KY{[MG]|[TS]}V{I|L};{[MG]|[TS]}[YK]{M(Oxidation (M))|F}E{M(Oxidation (M))|F}V{I|L};[{I|L}P]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ES]|[DT]|[{I|L}C]}EV{I|L};[YK]{[MG]|[TS]}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}V{I|L};{[QN]|[E{I|L}]|[KN]}P{[WT]|[RM]}{M(Oxidation (M))|F}EV{I|L} 3.8403;3.306;3.1012;3.0829;2.9309;2.7498;2.5485;2.3398;2.1735;2.1669 -;+;-;-;-;-;-;-;-;- + 485 1 1.71 58831.7 1.0 14657 5875 20530 HBL1_DMSO_200M_050219_1,20534 HBL1_DMSO_200M_050219_1,20534,STYKFFEVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20535 100.14 309.0 412760.0 25 0 33885.0 -1 0 116 917.095871020223 2748.2657836608687 3 917.4322997927666 MULTI CID FTMS 0 0 0 20530 322752.78125 0.0434542368895893 16 -0.9936370849609376 5 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 65.372 0.0 0.0 2.3787 0.0 0.0 0.0 1707.6500584386072 1707.6500584386072 7.307131330965717 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.3054621874040891 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.3787 - 1427 1 1.71 89414.4 1.0 14658 5875 20530 HBL1_DMSO_200M_050219_1,20535 HBL1_DMSO_200M_050219_1,20535, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20536 100.15 419.0 504230.0 25 0 64981.0 + 13313 HKTRPLRIPV 10 74 608.8831619848901 1215.75177103658 2 608.8834106326103 MULTI CID FTMS 0 0 0 20530 254062.34375 1.0 0 0.0 6 Unmodified _HKTRPLRIPV_ REV__ENSG00000111142|ENST00000323666|METAP2;REV__nc|ENSG00000111142|P50579-2|METAP2;REV__nc|ENSG00000111142|P50579-3|METAP2 1.4819007175156935 0.719781833666733 3 {I|L} 1 -1 10.278 0.0 0.0 0.84537 0.0 0.0 1084.6568899104066 0.0 1084.6568899104066 0.0 0.2775866392491544 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.84537 + + 12 + 1 1.71 157516.9 1.0 14659 5875 20530 HBL1_DMSO_200M_050219_1,20536 HBL1_DMSO_200M_050219_1,20536,HKTRPLRIPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20537 100.15 245.0 281240.0 25 0 37222.0 + 39340 VAFSQVLTI 9 95 489.2864634843601 976.5583740355204 2 489.2863342165947 MULTI CID FTMS 0 0 0 20530 255933.609375 0.2102841744965119 5 -0.3348922729492187 7 Unmodified _VAFSQVLTI_ ENSG00000104976|ENST00000221573|SNAPC2 50.855029805455786 0.0384952370514206 3 V{[WN]|[YH]}T{I|L} 5 6 30.711 0.0 0.0 3.1448 0.0 0.0 345.2236705216515 0.0 345.2236705216515 0.0 17.090124043547668 0.0 0.0 0 0.0 0.0 1.0010912013506126 0.3252574989159953 V{[WN]|[YH]}T{I|L} 3.1448 - 881 + 1 1.71 57410.2 1.0 14660 5875 20530 HBL1_DMSO_200M_050219_1,20537 HBL1_DMSO_200M_050219_1,20537,VAFSQVLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20538 100.16 220.0 257830.0 25 0 22426.0 + 18363 KVPEELVFASL 11 83 616.3502398776113 1230.6859268220226 2 616.3506347537041 MULTI CID FTMS 0 0 0 20530 226543.859375 0.3362528434256603 1 -0.1326522827148437 8 Unmodified _KVPEELVFASL_ ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D 28.23362336080872 0.4292685378469897 3 [EP]E{I|L}VKV{M(Oxidation (M))|F}AS{I|L} 11 4 + 63.901 0.0 0.0 5.1923 5.1923 75.452 0.0 0.0 0.0 1.4806253545543768 6.787213886613763 1.4806253545543768 1.4806253545543768 0 1.492992819099939 0.0 0.0 0.0 [EP]E{I|L}VKV{M(Oxidation (M))|F}AS{I|L};{[TV]|[{I|L}S]}[HM]VKV{M(Oxidation (M))|F}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}A{M(Oxidation (M))|F}VR[H{I|L}]AS{I|L};[EP]E{I|L}V{M(Oxidation (M))|F}AKVS{I|L};{[TV]|[{I|L}S]}[HM]V{M(Oxidation (M))|F}AKVS{I|L} 5.1923;5.072;4.2983;3.706;3.5857 -;-;-;-;- 206 1 1.71 46981.9 1.0 14661 5875 20530 HBL1_DMSO_200M_050219_1,20538 HBL1_DMSO_200M_050219_1,20538,KVPEELVFASL False True KVPEELVFASL 100.15855 616.350634753704 11493542.0 20530.0 ENSG00000048707|ENST00000620676|VPS13D;;nc|ENSG00000048707|Q5THJ4-2|VPS13D 6.613485336303711 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20539 100.17 366.0 304540.0 25 0 23058.0 -1 0 108 688.0735427739423 2748.265065229369 4 688.3247558474541 MULTI CID FTMS 0 0 0 20530 230662.921875 0.0401236713746645 16 -0.9936370849609376 9 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 66.252 0.0 0.0 2.4107 0.0 0.0 0.0 1707.6498567668602 1707.6498567668602 19.64277983662076 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.5044321917401079 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.4107 - 3033 1 1.71 86873.9 1.0 14662 5875 20530 HBL1_DMSO_200M_050219_1,20539 HBL1_DMSO_200M_050219_1,20539, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20540 100.18 800.0 309890.0 25 0 21076.0 + 45116 YPYVAVML 8 104 955.495381933338 954.4881054667378 1 955.4969360232352 MULTI CID FTMS 0 0 0 20530 192965.265625 0.2326327388702909 8 -0.4932098388671875 10 Unmodified _YPYVAVML_ ENSG00000188243|ENST00000682242|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF;nc|ENSG00000188243|Q7Z4G1-2|COMMD6 52.33426049586781 0.1282678332820461 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAVYM{I|L} 8 2 + 75.438 0.0 0.0 7.9035 7.9035 64.316 0.0 0.0 0.0 16.989700043360187 16.40978057358332 16.40978057358332 0.0 0 0.3494850021680094 1.6989700043360187 0.3807196863200844 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAVYM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAYVM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VYAVM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YVAVM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVYVM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVVYM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAYMV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAVMY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VYAMV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAVVM{I|L} 7.9035;7.9035;7.5881;7.2728;7.2692;7.2692;7.0375;6.9066;6.7221;6.7027 -;-;-;+;-;-;-;-;-;- + 2810 1 1.71 161490.8 0.75 14663 5875 20530 HBL1_DMSO_200M_050219_1,20540 HBL1_DMSO_200M_050219_1,20540,YPYVAVML True True YPYVAVML 100.179 955.496936023235 11679231.25 20530.0 ENST00000477377.1_1_13:76104099-76111947:-|nuORF;;ENSG00000188243|ENST00000682242|COMMD6;;nc|ENSG00000188243|Q7Z4G1-2|COMMD6 4.631681124369304 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20541 100.19 435.0 351580.0 25 0 73482.0 + 10119 FPWPKVLKI 9 114 376.570766370445 1126.6904697115351 3 376.5704528689384 MULTI CID FTMS 0 0 0 20530 188626.203125 0.4201829733422196 -13 0.9641036987304688 11 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 49.55428908609986 0.0413471690215031 3 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 48.757 0.0 0.0 4.3275 4.3275 78.474 0.0 0.0 0.0 7.86150500836483 5.68201724066995 5.68201724066995 5.68201724066995 0 0.2887254899964357 0.0 0.0 0.6307196863200843 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K 4.3275;3.8232 +;- + 305 + 1 1.71 130791.9 1.0 14664 5875 20530 HBL1_DMSO_200M_050219_1,20541 HBL1_DMSO_200M_050219_1,20541,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20542 100.2 482.0 453600.0 25 0 76870.0 + 8262 EQIKDIFYI 9 151 584.8165257506329 1167.6184985680657 2 584.8163329958916 MULTI CID FTMS 0 0 0 20530 173064.59375 0.2366551485631941 -1 0.122467041015625 12 Unmodified _EQIKDIFYI_ ENSG00000164902|ENST00000297540|PHAX 86.33184430468982 0.0159826143231117 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KQE{I|L}Y{I|L} 9 5 + 75.745 0.0 0.0 6.4872 6.4872 85.895 0.0 0.0 0.0 9.030899869919438 16.478174818886373 9.030899869919438 6.020599913279625 0 0.8807196863200843 1.154901959985743 2.110924374808178 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KQE{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{M(Oxidation (M))|F}QE{I|L}Y{I|L};[{M(Oxidation (M))|F}V]EKQE{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K[AG]E{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KQEY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{M(Oxidation (M))|F}[AG]E{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}QE{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}QE{I|L}Y{I|L};[K{I|L}]D{M(Oxidation (M))|F}QE{I|L}Y{I|L};[{M(Oxidation (M))|F}V]EK[AG]E{I|L}Y{I|L} 6.4872;5.9715;5.7137;5.6985;5.3996;5.1829;5.1566;5.0726;5.0503;4.9251 -;-;-;-;-;-;-;-;-;- 13347 1 1.71 162677.7 1.0 14665 5875 20530 HBL1_DMSO_200M_050219_1,20542 HBL1_DMSO_200M_050219_1,20542,EQIKDIFYI True True EQIKDIFYI 100.19526 584.816332995892 7515874.0 20530.0 ENSG00000164902|ENST00000297540|PHAX 4.770185470581055 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20543 100.2 475.0 209200.0 25 0 25075.0 + 6654 EAWPALQI 8 123 464.2505241855204 926.4864954378407 2 464.2506286501884 MULTI CID FTMS 0 0 0 20530 163281.90625 0.114881195072718 10 -0.6526107788085938 13 Unmodified _EAWPALQI_ ENSG00000158526|ENST00000375151|TSR2 53.57557251787612 0.1224291679108181 3 [PA]WEA 5 5 23.389 0.0 0.0 2.5245 0.0 0.0 0.0 369.2132330382813 369.2132330382813 4.208187539523749 0.0 0.0 0.0 0 0.0 1.0 0.8494850021680094 0.0 [PA]WEA 2.5245 - 314 1 1.71 78775.0 1.0 14666 5875 20530 HBL1_DMSO_200M_050219_1,20543 HBL1_DMSO_200M_050219_1,20543,EAWPALQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20544 100.21 157.0 506450.0 25 0 161230.0 + 18083 KTIDGILLL 9 93 493.3183483650863 984.6221437969726 2 493.3184692263603 MULTI CID FTMS 0 0 0 20530 154778.046875 0.1879705433094916 -1 0.122467041015625 14 Unmodified _KTIDGILLL_ ENSG00000139842|ENST00000375440|CUL4A;ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000139842|Q13619-2|CUL4A;nc|ENSG00000158290|Q13620-3|CUL4B;nc|ENSG00000158290|Q13620|CUL4B 60.07390631473393 0.0260411565414776 3 {I|L}{I|L}GD{I|L}TK{I|L}{I|L} 9 6 + 71.27 0.0 0.0 7.2383 7.2383 86.051 0.0 0.0 0.0 15.669015600442576 42.67606240177031 15.669015600442576 4.195925227640984 0 0.5 1.6989700043360187 1.1989700043360187 0.0 {I|L}{I|L}GD{I|L}TK{I|L}{I|L};{I|L}{I|L}GD[KT]{I|L}{I|L}{I|L};{I|L}{I|L}G{[CA]|SS}G{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}G{[CA]|SS}{I|L}G{I|L}{I|L}{I|L};{I|L}{I|L}GK{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{I|L};{I|L}{I|L}G{[TV]|[{I|L}S]}SG{I|L}{I|L}{I|L};{I|L}{I|L}G{[TV]|[{I|L}S]}EK{I|L}{I|L};[VP]K[R{M(Oxidation (M))|F}]{I|L}{I|L}{I|L};[VP]K[C(Carbamidomethyl (C))K]K{I|L}{I|L} 7.2383;6.8121;6.7849;6.3795;6.0218;5.8064;4.8877;2.5231;1.7328 -;-;-;-;-;-;-;-;- 420 1 1.71 65654.5 1.0 14667 5875 20530 HBL1_DMSO_200M_050219_1,20544 HBL1_DMSO_200M_050219_1,20544,KTIDGILLL True True KTIDGILLL 100.20794 493.31846922636 15078493.0 20530.0 nc|ENSG00000158290|Q13620-3|CUL4B;;nc|ENSG00000139842|Q13619-2|CUL4A;;ENSG00000139842|ENST00000375440|CUL4A;;nc|ENSG00000158290|Q13620|CUL4B;;ENSG00000158290|ENST00000371322|CUL4B -0.2385374108950297 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20545 100.22 412.0 277150.0 25 0 18363.0 9079 FFFIDHSWV 9 112 599.2885570161901 1196.56256109918 2 599.2876464724541 MULTI CID FTMS 0 0 0 20530 154556.78125 0.6098327768269767 1 -0.1326522827148437 15 Unmodified _FFFIDHSWV_ SVA_D_dup1331|chr19:38854971-38856692:-|1.2988722813039473|0.199855440521665|2.7|47.0|52|2|anti-sense 13.50788311687929 0.4710407108020397 3 [EP]{I|L}RDWG 7 7 37.44 0.0 0.0 3.1289 0.0 0.0 0.0 340.1296840905613 340.1296840905613 15.678439902686794 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [EP]{I|L}RDWG 3.1289 - 731 1 1.71 90848.8 1.0 14668 5875 20530 HBL1_DMSO_200M_050219_1,20545 HBL1_DMSO_200M_050219_1,20545,FFFIDHSWV False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_1 20546 100.22 138.0 412520.0 25 0 90889.0 + 25103 MPYNYPVLL 9 90 555.2890545850029 1108.5635562368057 2 555.2887451052666 MULTI CID FTMS 0 0 0 20530 147540.390625 0.2558239556895494 -8 0.4779129028320312 16 Unmodified _MPYNYPVLL_ ENSG00000102786|ENST00000311234|INTS6;ENSG00000165359|ENST00000639893|INTS6L;nc|ENSG00000102786|Q9UL03-3|INTS6;nc|ENSG00000165359|Q5JSJ4|INTS6L 28.486842064014134 0.1687311288560894 3 [YN]PYMPV{I|L}{I|L} 9 4 + 48.024 0.0 0.0 4.3321 4.3321 73.867 0.0 0.0 0.0 2.218487496163561 7.912027720371668 2.218487496163561 2.218487496163561 0 0.8182503180159344 0.0 0.0 0.75 [YN]PYMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYMPV{I|L}{I|L};[YN]PMYPV{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}YMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NMYPV{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}MYPV{I|L}{I|L};[AG]V{M(Oxidation (M))|F}YMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGYMPV{I|L}{I|L};[YN]PY[VP]M{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RH]MPV{I|L}{I|L} 4.3321;4.132;4.0606;3.9017;3.8604;3.6302;2.6609;2.6248;2.6188;2.4818 -;-;-;-;-;-;-;-;-;- 321 1 1.71 50627.5 1.0 14669 5875 20530 HBL1_DMSO_200M_050219_1,20546 HBL1_DMSO_200M_050219_1,20546,MPYNYPVLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20547 100.23 800.0 256620.0 25 0 46676.0 + 15239 IPFVAPPLV 9 126 476.7971811594156 951.5798093856312 2 476.7971679568291 MULTI CID FTMS 0 0 0 20530 139825.28125 0.2828549198160005 -8 0.4779129028320312 17 Unmodified _IPFVAPPLV_ ENSG00000159596|ENST00000372025|TMEM69 67.41302359171755 0.0220989861905124 3 [{I|L}P]{M(Oxidation (M))|F}G{I|L}PP[{I|L}V] 9 2 + 56.634 0.0 0.0 5.9515 5.9515 81.738 0.0 0.0 0.0 3.357792609959205 25.83159042249612 3.357792609959205 3.679767852945943 0 0.7302046884880937 1.6989700043360187 0.0 0.0 [{I|L}P]{M(Oxidation (M))|F}G{I|L}PP[{I|L}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VA{I|L}PP[{I|L}V];[{I|L}P]{M(Oxidation (M))|F}VAPP[{I|L}V];[{I|L}P]G{M(Oxidation (M))|F}{I|L}PP[{I|L}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}G{I|L}PP[{I|L}V];{I|L}{I|L}MG{I|L}PP[{I|L}V];{I|L}{I|L}TP{I|L}[WP]{I|L};[{I|L}P]{M(Oxidation (M))|F}GP{I|L}P[{I|L}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}APP[{I|L}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VAP{I|L}P[{I|L}V] 5.9515;5.5648;5.3188;5.3188;5.0634;5.0307;5.0094;4.9516;4.9321;4.5649 -;-;+;-;-;-;-;-;-;- + 899 1 1.71 158989.6 0.5199999809265137 14670 5875 20530 HBL1_DMSO_200M_050219_1,20547 HBL1_DMSO_200M_050219_1,20547,IPFVAPPLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20548 100.24 259.0 320860.0 25 0 51838.0 + 44485 YPALIGNLV 9 110 480.28166303513086 958.5487731370616 2 480.2816345095634 MULTI CID FTMS 0 0 0 20530 141417.140625 0.4926276465946974 -8 0.4779129028320312 18 Unmodified _YPALIGNLV_ ENSG00000242485|ENST00000344843|MRPL20;nc|ENSG00000242485|Q9BYC9-2|MRPL20 52.69307289633392 0.0344652456970635 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}{I|L}GN[{I|L}V] 9 0 + 50.837 0.0 0.0 5.3035 5.3035 83.411 0.0 0.0 0.0 7.447274948966935 7.147642715192504 7.147642715192504 7.447274948966935 0 0.4247425010840047 1.2218487496163564 0.0 0.4247425010840047 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}{I|L}GN[{I|L}V];[PA]{I|L}Y{I|L}GN[{I|L}V];[PA]{I|L}{I|L}YGN[{I|L}V];[PA]Y{I|L}{I|L}GN[{I|L}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}{I|L}GGG[{I|L}V];[PA]{I|L}G{I|L}YN[{I|L}V];[PA]{I|L}{I|L}GYN[{I|L}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}[NG]{I|L}[{I|L}V];[PA]AV{I|L}YN[{I|L}V];[PA]{I|L}G{I|L}NY[{I|L}V] 5.3035;4.5266;4.2125;4.0288;3.8998;3.5844;3.5844;3.4305;3.2704;3.1946 +;-;-;-;-;-;-;-;-;- + 703 1 1.71 70209.1 1.0 14671 5875 20530 HBL1_DMSO_200M_050219_1,20548 HBL1_DMSO_200M_050219_1,20548,YPALIGNLV True True YPALIGNLV 100.23788 480.281634509563 52870933.5 20530.0 nc|ENSG00000242485|Q9BYC9-2|MRPL20;;ENSG00000242485|ENST00000344843|MRPL20 4.873503049214681 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20549 100.24 353.0 226730.0 25 0 27793.0 -1 0 106 508.5568138630584 2537.747686982292 5 508.7567321658134 MULTI CID FTMS 0 0 0 20530 118309.4921875 1.0 0 0.0 19 3 [{I|L}P]MG{[CP]|[EA]}YP{I|L} 9 -1 26.589 0.0 0.0 1.0477 0.0 0.0 0.0 1563.2497674634897 1563.2497674634897 9.933787369250169 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 [{I|L}P]MG{[CP]|[EA]}YP{I|L} 1.0477 - 205 1 1.71 69152.4 1.0 14672 5875 20530 HBL1_DMSO_200M_050219_1,20549 HBL1_DMSO_200M_050219_1,20549, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20550 100.26 800.0 64687.0 25 0 4637.7 -1 0 83 831.8982772101934 3323.5640029743736 4 832.1520873904228 MULTI CID FTMS 0 0 0 20530 107938.640625 0.4826710150384529 5 -0.3348922729492187 20 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 33.365 0.0 0.0 1.0039 0.0 0.0 0.0 2382.0214192748244 2382.0214192748244 27.791681396006 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.0039 - 182 1 1.71 53044.1 0.5 14673 5875 20530 HBL1_DMSO_200M_050219_1,20550 HBL1_DMSO_200M_050219_1,20550, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20552 100.26 17.0 798700.0 25 0 57194.0 40545 VIYGRYLR 8 41 520.3051862679811 1038.595819602762 2 520.3056518435478 MULTI CID FTMS 0 0 0 20551 3096160.25 1.0 0 0.0 1 Unmodified _VIYGRYLR_ ENSG00000135776|ENST00000344517|ABCB10 2.889219685676258 0.8067950007271085 3 {I|L} 1 7 10.969 0.0 0.0 1.0561 0.0 0.0 907.5004196777604 0.0 907.5004196777604 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0561 + + 7 + 1 1.71 20723.0 1.0 14674 5876 20551 HBL1_DMSO_200M_050219_1,20552 HBL1_DMSO_200M_050219_1,20552,VIYGRYLR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20553 100.26 24.0 623530.0 25 0 69131.0 + 38683 TTLKPILTI 9 42 500.3260045775757 998.6374562219512 2 500.3262206912041 MULTI CID FTMS 0 0 0 20551 2517818.0 1.0 0 0.0 2 Unmodified _TTLKPILTI_ REV__L1PA6_dup546|chr2:49227587-49231532:-|1.156546377819926|0.2927699401366612|1.98|48.0|3|1|sense 6.2057823575117 0.6980434486082533 3 {I|L} 1 -1 12.474 0.0 0.0 1.2491 0.0 0.0 867.5425445781998 0.0 867.5425445781998 0.0 -5.400990676322905 -5.400990676322905 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2491 + + 4 + 1 1.71 19260.3 1.0 14675 5876 20551 HBL1_DMSO_200M_050219_1,20553 HBL1_DMSO_200M_050219_1,20553,TTLKPILTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20554 100.26 22.0 3604400.0 25 0 492770.0 + 1864 ALVPVFAHL 9 70 483.7922416384986 965.5699303437972 2 483.7924987673759 MULTI CID FTMS 0 0 0 20551 2958578.5 1.0 0 0.0 3 Unmodified _ALVPVFAHL_ ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 45.7499826716795 0.0496882803020414 3 [{I|L}A]VPV{M(Oxidation (M))|F}A[H{I|L}] 9 0 + 65.111 0.0 0.0 6.7433 6.7433 90.887 0.0 0.0 0.0 24.47621246364342 7.147642715192504 7.147642715192504 9.503187623076954 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + + [{I|L}A]VPV{M(Oxidation (M))|F}A[H{I|L}];[{I|L}A]V{I|L}{[ET]|[MV]}A[H{I|L}] 6.7433;5.7591 +;- + 159 + 1 1.71 67301.6 1.0 14676 5876 20551 HBL1_DMSO_200M_050219_1,20554 HBL1_DMSO_200M_050219_1,20554,ALVPVFAHL True True ALVPVFAHL 100.26499 483.792498767376 59681802.0 20551.0 ENST00000597227.5_1_19:50432514-50434160:+|nuORF;;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;;ENST00000423777.6_1_19:50432412-50434160:+|nuORF 7.545392036437988 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20555 100.27 51.0 1715400.0 25 0 132010.0 + 24529 MISLEIPQV 9 96 515.2868147963536 1028.5590766595071 2 515.2866088747978 MULTI CID FTMS 0 0 0 20551 848386.0 1.0 0 0.0 4 Unmodified _MISLEIPQV_ ENSG00000111231|ENST00000228827|GPN3;nc|ENSG00000111231|Q9UHW5-2|GPN3;nc|ENSG00000111231|Q9UHW5-3|GPN3 97.07464715276576 0.0121042244793311 3 {[TV]|[{I|L}S]}E{I|L}M{I|L} 6 5 56.366 0.0 0.0 5.48 0.0 0.0 0.0 339.1697021759275 339.1697021759275 23.555028324536373 0.0 0.0 0.0 0 0.7614393726401688 1.2218487496163564 1.7658715643802767 0.0 {[TV]|[{I|L}S]}E{I|L}M{I|L} 5.48 - 927 1 1.71 74848.4 1.0 14677 5876 20551 HBL1_DMSO_200M_050219_1,20555 HBL1_DMSO_200M_050219_1,20555,MISLEIPQV True True MISLEIPQV 100.26633 515.286608874798 7679249.0 20551.0 nc|ENSG00000111231|Q9UHW5-3|GPN3;;nc|ENSG00000111231|Q9UHW5-2|GPN3;;ENSG00000111231|ENST00000228827|GPN3 5.903557936350505 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20556 100.27 92.0 828360.0 25 0 77798.0 + 34732 SPYPWPLNHI 10 92 612.3146212862029 0 612.3152343630791 PEAK CID FTMS 0 0 0 20551 610835.8125 0.8200319626577083 2 -0.1253814697265625 5 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 65.23502041540118 0.0163491082342152 3 YPW{I|L}PN 6 6 47.049 0.0 0.0 3.8482 0.0 0.0 184.08825224910748 265.1319219681989 449.2201742173064 0.0 0.0 0.0 0.0 0 1.2134679910804405 0.0 0.0 1.1549471895720984 YPW{I|L}PN 3.8482 - 162 + 1 1.71 62133.1 1.0 14678 5876 20551 HBL1_DMSO_200M_050219_1,20556 HBL1_DMSO_200M_050219_1,20556,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20557 100.27 86.0 925600.0 25 0 69889.0 + 21504 LPIDDVLRI 9 92 527.318438465863 1052.622323998526 2 527.3185912966728 MULTI CID FTMS 0 0 0 20551 472609.0625 1.0 0 0.0 6 Unmodified _LPIDDVLRI_ ENSG00000113851|ENST00000231948|CRBN;ENST00000459840.5_1_3:3192551-3196584:-|nuORF;nc|ENSG00000113851|Q96SW2-2|CRBN 31.26834338654808 0.1333407332142048 3 {I|L}P{I|L}DDV{I|L}R{I|L} 9 0 + 73.018 0.0 0.0 6.9368 6.9368 92.886 0.0 0.0 0.0 55.57110048012923 10.63486257521106 10.63486257521106 15.197953115119065 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}P{I|L}DDV{I|L}R{I|L};{I|L}{I|L}PDDV{I|L}R{I|L} 6.9368;5.493 +;- + 244 + 1 1.71 68924.0 1.0 14679 5876 20551 HBL1_DMSO_200M_050219_1,20557 HBL1_DMSO_200M_050219_1,20557,LPIDDVLRI False True LPIDDVLRI 100.27029 527.318591296673 11867275.0 20551.0 nc|ENSG00000113851|Q96SW2-2|CRBN;;ENST00000459840.5_1_3:3192551-3196584:-|nuORF;;ENSG00000113851|ENST00000231948|CRBN 4.15907899538676 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20558 100.27 186.0 597950.0 25 0 107320.0 + 1307 AIVDLIHDI 9 102 504.78979529645216 1007.5650376597044 2 504.7902404665947 MULTI CID FTMS 0 0 0 20551 435030.28125 0.0704170236844526 -7 0.4826736450195312 7 Unmodified _AIVDLIHDI_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 64.23631603340823 0.0237365939569086 3 [{I|L}A]VD{I|L}{I|L}{I|L}[HD] 9 2 + 87.615 0.0 0.0 8.6957 8.6957 90.257 0.0 0.0 0.0 27.147642715192504 11.020599913279623 11.020599913279623 5.465978039238735 0 1.363982988912431 2.0 1.6861818737241734 0.0 [{I|L}A]VD{I|L}{I|L}{I|L}[HD];[{I|L}A]V{I|L}D{I|L}{I|L}[HD];[{I|L}A]VD{I|L}{I|L}[HD]{I|L};[{I|L}A]V{I|L}D{I|L}[HD]{I|L};[{I|L}A]VHH[YR]{I|L};[{I|L}A]HHV[YR]{I|L};[{I|L}A]HHH{I|L}{I|L}[PA] 8.6957;8.1532;7.6019;7.0594;2.8378;2.0414;1.1797 -;-;+;-;-;-;- + 720 + 1 1.71 88936.4 1.0 14680 5876 20551 HBL1_DMSO_200M_050219_1,20558 HBL1_DMSO_200M_050219_1,20558,AIVDLIHDI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20559 100.28 165.0 576020.0 25 0 72712.0 + -1 LACFSCLTY 9 119 539.2405706935616 1076.4665884539231 2 539.2414428591728 MULTI CID FTMS 0 0 0 20551 346248.75 0.4048290285383573 -7 0.4826736450195312 8 Carbamidomethyl (C) _LACFSC(Carbamidomethyl (C))LTY_ REV__ENST00000520248.1_1_8:79672597-79674655:-|nuORF 32.116972079565 0.1225432171549407 3 [{I|L}A]CS{M(Oxidation (M))|F} 5 -1 47.338 0.0 0.0 4.3975 0.0 0.0 0.0 552.2144881944106 552.2144881944106 28.437244623784025 0.0 0.0 0.0 0 0.5 2.0 0.6139829889124311 0.0 [{I|L}A]CS{M(Oxidation (M))|F} 4.3975 - 310 1 1.71 77196.2 1.0 14681 5876 20551 HBL1_DMSO_200M_050219_1,20559 HBL1_DMSO_200M_050219_1,20559,LACFSCLTY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20560 100.28 188.0 334230.0 25 0 42435.0 44962 YPQQIFIQI 9 88 575.3189089163769 1148.6232648995538 2 575.3190185427666 MULTI CID FTMS 0 0 0 20551 318074.375 0.7300891366964477 1 -0.0943984985351562 9 Unmodified _YPQQIFIQI_ ENSG00000105173|ENST00000262643|CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1 26.88365393820708 0.1891292719743517 3 [AG]PQY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L} 10 3 + 52.72 0.0 0.0 4.5899 4.5899 75.129 0.0 0.0 0.0 7.7815125038364386 9.699915470362017 7.7815125038364386 2.552725051033065 0 0.6237125054200234 1.3010299956639813 0.0 0.3807196863200844 [AG]PQY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]QPY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]PQ{I|L}{M(Oxidation (M))|F}Y{I|L}Q{I|L};[AG]PQ{I|L}Y{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]QP{I|L}{M(Oxidation (M))|F}Y{I|L}Q{I|L};[AG]QP{I|L}Y{M(Oxidation (M))|F}{I|L}Q{I|L};[QP]QY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}][QP]{M(Oxidation (M))|F}Y{I|L}Q{I|L};[Q{I|L}][QP]Y{M(Oxidation (M))|F}{I|L}Q{I|L};QQPY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L} 4.5899;4.3676;4.3317;4.3278;4.1094;4.1056;3.9124;3.763;3.7591;3.6902 -;-;-;-;-;-;-;-;-;- 394 1 1.71 55603.8 1.0 14682 5876 20551 HBL1_DMSO_200M_050219_1,20560 HBL1_DMSO_200M_050219_1,20560,YPQQIFIQI False True KMEQLFLQL 100.28076 575.319018542767 4099209.0 20551.0 ENSG00000167842|ENST00000611091|MIS12 4.784681955973308 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20561 100.29 475.0 466840.0 25 0 37165.0 + 36586 TALPMVPIV 9 152 940.5526657124468 939.5453892458468 1 940.5552856326104 MULTI CID FTMS 0 0 0 20551 242773.34375 0.1682154875710061 6 -0.2668914794921875 10 Unmodified _TALPMVPIV_ ENSG00000165392|ENST00000298139|WRN 64.23631603340823 0.0237365939569086 3 {NN|[MP]|[D{I|L}]|[EV]}VTA{I|L}P{I|L}V 9 6 + 59.644 0.0 0.0 6.3482 6.3482 85.424 0.0 0.0 0.0 5.995629257967167 14.09256854528806 5.995629257967167 5.995629257967167 0 0.4247425010840047 0.5376020021010439 1.1421590589602533 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}VTA{I|L}P{I|L}V;[{I|L}P]MSA{I|L}P{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}SA{I|L}P{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}V[VS]VP{I|L}V;[{I|L}P][TA]MVP{I|L}V;[{I|L}P]M[TA]VP{I|L}V;[TA]{I|L}PMVP{I|L}V;[{I|L}P]V{[CT]|[{M(Oxidation (M))|F}G]}VP{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[TA]VP{I|L}V;[{I|L}P]V[CS]{I|L}P{I|L}V 6.3482;5.71;5.5199;5.2472;4.7964;4.609;4.5707;4.4216;4.4189;4.4033 -;-;-;-;-;-;+;-;-;- + 4585 1 1.71 140345.6 1.0 14683 5876 20551 HBL1_DMSO_200M_050219_1,20561 HBL1_DMSO_200M_050219_1,20561,TALPMVPIV True True TALPMVPIV 100.28919 940.55528563261 13674902.0 20551.0 ENSG00000165392|ENST00000298139|WRN 6.581254800160726 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20562 100.3 389.0 256520.0 25 0 22846.0 + 20601 LLPELRDWGV 10 108 599.3346208361492 1196.6546887390982 2 599.3351318240166 MULTI CID FTMS 0 0 0 20551 181981.984375 1.0 0 0.0 11 Unmodified _LLPELRDWGV_ ENSG00000141994|ENST00000309061|DUS3L;ENST00000589085.5_1_19:5787014-5789688:-|nuORF;nc|ENSG00000141994|Q96G46-2|DUS3L;nc|ENSG00000141994|Q96G46-3|DUS3L 32.78568957990786 0.2337485590374503 3 {I|L}{I|L}PE{I|L} 5 5 46.382 0.0 0.0 3.876 0.0 0.0 0.0 628.2858980768186 628.2858980768186 22.949083577134743 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.3054621874040891 0.0 + {I|L}{I|L}PE{I|L} 3.876 + + 449 + 1 1.71 79417.0 1.0 14684 5876 20551 HBL1_DMSO_200M_050219_1,20562 HBL1_DMSO_200M_050219_1,20562,LLPELRDWGV False True LLPELRDWGV 100.29617 599.335131824017 2602177.5 20551.0 ENST00000589085.5_1_19:5787014-5789688:-|nuORF;;nc|ENSG00000141994|Q96G46-2|DUS3L;;ENSG00000141994|ENST00000309061|DUS3L;;nc|ENSG00000141994|Q96G46-3|DUS3L 6.251253445943196 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20563 100.3 213.0 424340.0 25 0 60884.0 + 33988 SLILDLKYV 9 109 532.3243501092517 1062.6341472853032 2 532.3244506716728 MULTI CID FTMS 0 0 0 20551 161918.8125 0.7957115687193976 -2 0.2551193237304687 12 Unmodified _SLILDLKYV_ ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2 45.69961567697781 0.0497987121815769 3 {[TV]|[{I|L}S]}{I|L}{I|L}D{I|L}KYV 9 0 + 71.38 0.0 0.0 6.7173 6.7173 93.587 0.0 0.0 0.0 31.989700043360187 10.36220550087016 10.36220550087016 29.815534464597704 0 1.1989700043360187 2.0 0.3807196863200844 0.0 + + {[TV]|[{I|L}S]}{I|L}{I|L}D{I|L}KYV;{[TV]|[{I|L}S]}{I|L}{I|L}[WH]VPV;{[TV]|[{I|L}S]}{I|L}[WH]{I|L}VPV 6.7173;3.9115;3.699 +;-;- + 1317 + 1 1.71 75607.6 1.0 14685 5876 20551 HBL1_DMSO_200M_050219_1,20563 HBL1_DMSO_200M_050219_1,20563,SLILDLKYV True True SLILDLKYV 100.30023 532.324450671673 4380369.5 20551.0 nc|ENSG00000024048|Q8IWV8|UBR2;;ENSG00000024048|ENST00000372901|UBR2 3.5565455754597983 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20564 100.31 800.0 166210.0 25 0 15174.0 + 17194 KLLDISELDMV 11 147 638.3468259656536 1274.679098998107 2 638.3473998904228 MULTI CID FTMS 0 0 0 20551 153288.78125 0.6106222258433128 -4 0.2915878295898437 13 Unmodified _KLLDISELDMV_ ENSG00000185049|ENST00000382882|NELFA;ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF 59.05245873256422 0.0729907235015292 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}SED{I|L}MV 11 4 + 104.12 0.0 0.0 8.1686 8.1686 82.148 0.0 0.0 0.0 5.990335366977746 16.575773191777927 5.990335366977746 0.4845500650402812 0 0.9247425010840048 1.0969100130080565 2.572682509756042 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}SED{I|L}MV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}SE{I|L}DMV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}SED{I|L}MV;{I|L}{I|L}KD{I|L}SED{I|L}MV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}SE{I|L}DMV;{I|L}{I|L}KD{I|L}SE{I|L}DMV;{I|L}{I|L}DK{I|L}SED{I|L}MV;{I|L}{I|L}DK{I|L}SE{I|L}DMV;{[QN]|[E{I|L}]|[KN]}VK{I|L}SED{I|L}MV;{[QN]|[E{I|L}]|[KN]}VK{I|L}SE{I|L}DMV 8.1686;8.1306;7.7259;7.6986;7.6879;7.6606;7.5605;7.5225;7.3568;7.3188 -;-;-;-;-;-;-;-;-;- 8126 1 1.71 107256.2 0.6299999952316284 14686 5876 20551 HBL1_DMSO_200M_050219_1,20564 HBL1_DMSO_200M_050219_1,20564,KLLDISELDMV True True KLLDISELDMV 100.31407 638.347399890423 4370172.0 20551.0 ENST00000463820.5_1_4:1985048-1993691:-|nuORF;;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;;ENSG00000185049|ENST00000382882|NELFA 6.862983862559001 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20565 100.32 512.0 152790.0 25 0 11114.0 + 36664 TAYLFSRFV 9 110 552.2979907017366 1102.581428470273 2 552.2989990115166 MULTI CID FTMS 0 0 0 20551 145971.96875 0.3099866524854163 2 -0.1253814697265625 14 Unmodified _TAYLFSRFV_ ENSG00000184575|ENST00000332707|XPOT 19.361941925380144 0.3125782356748823 3 [TA]Y{I|L}{M(Oxidation (M))|F}S[TA]{I|L} 9 3 48.139 0.0 0.0 4.366 0.0 0.0 0.0 132.04586206607658 132.04586206607658 24.74932183384787 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 [TA]Y{I|L}{M(Oxidation (M))|F}S[TA]{I|L} 4.366 - 177 + 1 1.71 67033.4 1.0 14687 5876 20551 HBL1_DMSO_200M_050219_1,20565 HBL1_DMSO_200M_050219_1,20565,TAYLFSRFV False True TAYLFSRFV 100.3231 552.298999011517 6141598.0 20551.0 ENSG00000184575|ENST00000332707|XPOT 5.676957766215007 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20566 100.34 800.0 169230.0 25 0 15136.0 -1 DNREMDLLQL 10 102 631.8061369710235 1261.597721008847 2 631.8066284060478 MULTI CID FTMS 0 0 0 20551 106346.4140625 0.7905772544564685 -7 0.4826736450195312 15 Oxidation (M) _DNREM(Oxidation (M))DLLQL_ ENST00000586099.1_1_17:33687214-33689981:-|nuORF 23.78978130925829 0.4341852049148378 3 M{I|L}{I|L}Q{I|L} 5 -1 46.256 0.0 0.0 3.6664 0.0 0.0 645.2385119860259 0.0 645.2385119860259 0.0 30.057809497117844 0.0 0.0 0 1.1307196863200843 0.0 0.0 0.0 M{I|L}{I|L}Q{I|L} 3.6664 - 154 1 1.71 112155.4 0.5299999713897705 14688 5876 20551 HBL1_DMSO_200M_050219_1,20566 HBL1_DMSO_200M_050219_1,20566,DNREMDLLQL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20567 100.35 800.0 167130.0 25 0 12078.0 -1 0 163 962.9428960480228 1923.8712391628453 2 962.9413329958916 MULTI CID FTMS 0 0 0 20551 104889.3046875 0.8348894792900526 -4 0.2915878295898437 16 3 {[QN]|[E{I|L}]|[KN]}R[{M(Oxidation (M))|F}V]S{I|L} 7 -1 28.77 0.0 0.0 1.4954 0.0 0.0 0.0 1076.3695661494266 1076.3695661494266 1.7187804944751583 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.3054621874040891 0.805462187404089 {[QN]|[E{I|L}]|[KN]}R[{M(Oxidation (M))|F}V]S{I|L} 1.4954 - 1058 1 1.71 89920.4 0.4799999892711639 14689 5876 20551 HBL1_DMSO_200M_050219_1,20567 HBL1_DMSO_200M_050219_1,20567, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20569 100.36 55.0 1500800.0 25 0 215140.0 + 1815 ALTELLAKI 9 94 486.3103788438592 970.6062047545184 2 486.3105651736259 MULTI CID FTMS 0 0 0 20568 788505.8125 0.0231620732907808 10 -0.5126800537109375 1 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 85.64151623876279 0.0161498729896241 3 [{I|L}A]TE{I|L}A{I|L}K{I|L} 9 2 + 73.572 0.0 0.0 7.58 7.58 94.993 0.0 0.0 0.0 9.634403332117516 41.0187546902082 9.634403332117516 18.02378753635657 0 2.3935078169319297 2.0 1.5356668758921828 0.0 [{I|L}A]TE{I|L}A{I|L}K{I|L};{[QN]|[E{I|L}]|[KN]}TA{I|L}A{I|L}K{I|L};[{I|L}A]{I|L}ETA{I|L}K{I|L};{[ET]|[MV]}{I|L}A{I|L}A{I|L}K{I|L};{[QN]|[E{I|L}]|[KN]}T{I|L}AA{I|L}K{I|L};{[ET]|[MV]}{I|L}{I|L}AA{I|L}K{I|L};{[QN]|[E{I|L}]|[KN]}TA{I|L}RR{I|L};[{I|L}T]EA{I|L}A{I|L}K{I|L};[{I|L}A]K[SG]ARR{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}TAA{I|L}K{I|L} 7.58;5.723;5.547;5.3992;5.2796;4.9557;4.8782;4.7743;4.7724;4.6217 -;-;-;-;-;-;-;-;-;- 656 1 1.722 69250.4 1.0 14690 5877 20568 HBL1_DMSO_200M_050219_1,20569 HBL1_DMSO_200M_050219_1,20569,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20570 100.37 800.0 173540.0 25 0 22036.0 + 45157 YQFNPMESIKL 11 144 685.3447581837006 1368.6749634342011 2 685.3450805544853 MULTI CID FTMS 0 0 0 20568 63870.12109375 0.256283822032901 1 -0.0309829711914062 2 Unmodified _YQFNPMESIKL_ ENSG00000137965|ENST00000370747|IFI44;ENST00000495254.5_1_1:79119932-79128426:+|nuORF 59.49591170135616 0.071190994960647 3 [YQ]{M(Oxidation (M))|F}NPMES{I|L}K{I|L} 11 0 [YQ] + + 53.93 24.705 8.4862 3.9403 3.9403 52.365 0.0 0.0 0.0 0.0 1.524334424335116 0.0 0.0 0 1.409097005026964 0.0 0.6747425010840047 0.6307196863200843 + + [YQ]{M(Oxidation (M))|F}NPMES{I|L}K{I|L} 3.9403 + + 1523 + 1 1.722 103049.7 0.75 14691 5877 20568 HBL1_DMSO_200M_050219_1,20570 HBL1_DMSO_200M_050219_1,20570,YQFNPMESIKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20571 100.38 691.0 261380.0 25 0 30550.0 + 26252 NQLEALVGL 9 136 478.7740900674188 955.5336272016376 2 478.7741882205009 MULTI CID FTMS 0 0 0 20568 143771.625 0.5291154910683789 1 -0.0309829711914062 3 Unmodified _NQLEALVGL_ ENSG00000104774|ENST00000456935|MAN2B1;ENST00000466794.5_1_19:12767171-12772081:-|nuORF;nc|ENSG00000104774|O00754-2|MAN2B1 81.61307344734483 0.0171259190214613 3 {[QN]|[E{I|L}]|[KN]}{I|L}EA{I|L} 6 3 65.182 0.0 0.0 6.8215 0.0 0.0 0.0 284.16001861412207 284.16001861412207 39.36329220171751 0.0 0.0 0.0 0 0.3807196863200844 0.619788758288394 0.8388903526330403 1.837180496500464 + {[QN]|[E{I|L}]|[KN]}{I|L}EA{I|L} 6.8215 + + 1374 1 1.722 139356.8 1.0 14692 5877 20568 HBL1_DMSO_200M_050219_1,20571 HBL1_DMSO_200M_050219_1,20571,NQLEALVGL True True NQLEALVGL 100.38337 478.774188220501 2372516.0 20568.0 ENST00000466794.5_1_19:12767171-12772081:-|nuORF;;ENSG00000104774|ENST00000456935|MAN2B1;;nc|ENSG00000104774|O00754-2|MAN2B1 5.1446959177653 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20573 100.39 258.0 509050.0 25 0 68597.0 + 18085 KTIDYIQFL 9 140 570.8184706065383 1139.6223882798763 2 570.8187744021416 MULTI CID FTMS 0 0 0 20572 234423.1875 0.4132987629480546 2 -0.0768585205078125 1 Unmodified _KTIDYIQFL_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 60.07390631473393 0.0260411565414776 3 [{I|L}T]DKY{I|L}Q{M(Oxidation (M))|F}{I|L} 9 2 + 82.111 0.0 0.0 7.2051 7.2051 80.46 0.0 0.0 0.0 6.669165563113552 16.478174818886373 6.669165563113552 0.6694678963061307 0 0.8807196863200843 0.958607314841775 1.7140901911813642 0.8494850021680094 [{I|L}T]DKY{I|L}Q{M(Oxidation (M))|F}{I|L};[{I|L}T]KDY{I|L}Q{M(Oxidation (M))|F}{I|L};[{I|L}T]DYK{I|L}Q{M(Oxidation (M))|F}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}TK{I|L}Q{M(Oxidation (M))|F}{I|L};[{I|L}T]DKY{I|L}[AG]{M(Oxidation (M))|F}{I|L};[{I|L}T]KDY{I|L}[AG]{M(Oxidation (M))|F}{I|L};[{I|L}T]DYK{I|L}[AG]{M(Oxidation (M))|F}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}TK{I|L}[AG]{M(Oxidation (M))|F}{I|L};{[ET]|[MV]}{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}Q{M(Oxidation (M))|F}{I|L};[{I|L}T]DKY{I|L}{M(Oxidation (M))|F}Q{I|L} 7.2051;7.1464;6.8749;6.6199;6.3971;6.3384;6.0669;5.8119;5.7872;5.4042 -;-;-;-;-;-;-;-;-;- 2361 1 1.722 100828.8 1.0 14693 5878 20572 HBL1_DMSO_200M_050219_1,20573 HBL1_DMSO_200M_050219_1,20573,KTIDYIQFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20574 100.4 249.0 475120.0 25 0 32121.0 + 21340 LPFEVLQHI 9 121 548.3136608402074 1094.612768747215 2 548.3125488162041 MULTI CID FTMS 0 0 0 20572 173479.546875 0.1405155905139984 -5 0.3916397094726562 2 Unmodified _LPFEVLQHI_ ENSG00000118496|ENST00000237281|FBXO30 82.5293158979368 0.0169039238599547 3 {I|L}P{M(Oxidation (M))|F}EV{I|L}QH{I|L} 9 0 + 103.56 0.0 0.0 9.4608 9.4608 96.654 0.0 0.0 0.0 61.16373455765242 12.587418566968154 12.587418566968154 13.455612550363796 0 2.071333751784365 1.6989700043360187 0.3807196863200844 0.4247425010840047 + + {I|L}P{M(Oxidation (M))|F}EV{I|L}QH{I|L};{I|L}P{M(Oxidation (M))|F}EV{I|L}[AG]H{I|L};[{I|L}P]W{I|L}VEN[KP];{I|L}P{[DA]|[EG]}{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}H{I|L};{I|L}P[VS]{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}H{I|L};[{I|L}P]W{I|L}VEGG[KP];{I|L}P{M(Oxidation (M))|F}[KS]{M(Oxidation (M))|F}{I|L}M{I|L};{I|L}P{[DA]|[EG]}{I|L}{I|L}[HA]{M(Oxidation (M))|F}V;{I|L}P[VS]{I|L}{I|L}[HA]{M(Oxidation (M))|F}V;[{I|L}P]{M(Oxidation (M))|F}TV{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KP] 9.4608;8.2316;5.8969;5.2455;5.2455;5.0557;4.1409;3.9463;3.9463;1.8791 +;-;-;-;-;-;-;-;-;- + 2191 + 1 1.722 102064.3 1.0 14694 5878 20572 HBL1_DMSO_200M_050219_1,20574 HBL1_DMSO_200M_050219_1,20574,LPFEVLQHI True True LPFEVLQHI 100.3952 548.312548816204 15506579.0 20572.0 ENSG00000118496|ENST00000237281|FBXO30 6.004921754201253 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20576 100.41 553.0 280830.0 25 0 23236.0 + 6664 EAYFVPLV 8 142 937.5035705147844 936.4962940481844 1 937.5040161013604 MULTI CID FTMS 0 0 0 20575 164331.75 0.5687346368787588 -3 0.1368865966796875 1 Unmodified _EAYFVPLV_ ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B 63.562846038646086 0.116059504757595 3 {[CP]|[EA]}Y{M(Oxidation (M))|F}VP{I|L}V 8 0 + 50.448 0.0 0.0 5.3869 5.3869 76.014 0.0 0.0 0.0 1.3830269816628231 14.904630595263413 1.3830269816628231 1.3830269816628231 0 1.2134679910804405 0.0 1.0 0.0 + + {[CP]|[EA]}Y{M(Oxidation (M))|F}VP{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{M(Oxidation (M))|F}VP{I|L}V;[Y{M(Oxidation (M))|F}]AEVP{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}EVP{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}YP{I|L}V;{[CP]|[EA]}V{M(Oxidation (M))|F}YP{I|L}V;[{M(Oxidation (M))|F}V]EAYP{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}AYP{I|L}V;[TP]T{M(Oxidation (M))|F}YP{I|L}V;{[CP]|[EA]}YV{M(Oxidation (M))|F}P{I|L}V 5.3869;5.2392;5.0695;4.467;4.4308;4.2129;4.1582;3.9213;3.7437;3.5958 +;-;-;-;-;-;-;-;-;- + 1080 1 1.722 103988.7 1.0 14695 5879 20575 HBL1_DMSO_200M_050219_1,20576 HBL1_DMSO_200M_050219_1,20576,EAYFVPLV True True EAYFVPLV 100.407 937.50401610136 2101809.5 20575.0 nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENSG00000137713|ENST00000527614|PPP2R1B 5.649711926778157 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20577 100.41 104.0 898030.0 25 0 43676.0 + 29968 QSVDLVFPV 9 87 1003.5493287342352 1002.5420522676352 1 1003.546801745892 MULTI CID FTMS 0 0 0 20575 490831.84375 0.1121803407679603 5 -0.3303985595703125 2 Unmodified _QSVDLVFPV_ ENSG00000166452|ENST00000309377|AKIP1;nc|ENSG00000166452|Q9NQ31-2|AKIP1;nc|ENSG00000166452|Q9NQ31-3|AKIP1 99.79894945604345 0.0109923542231827 3 {NN|[MP]|[D{I|L}]|[EV]}VSQV{M(Oxidation (M))|F}[VP] 9 4 + 74.478 0.0 0.0 7.4289 7.4289 86.161 0.0 0.0 0.0 10.422429093808104 7.147642715192504 7.147642715192504 3.749387366082999 0 0.9247425010840048 1.154901959985743 1.674742501084005 1.1861818737241734 {NN|[MP]|[D{I|L}]|[EV]}VSQV{M(Oxidation (M))|F}[VP];{NN|[MP]|[D{I|L}]|[EV]}VSVQ{M(Oxidation (M))|F}[VP];{NN|[MP]|[D{I|L}]|[EV]}VS[AG]V{M(Oxidation (M))|F}[VP];{[QV]|[N{I|L}]|[RA]|[KV]}SD{I|L}V{M(Oxidation (M))|F}[VP];{NN|[MP]|[D{I|L}]|[EV]}VQSV{M(Oxidation (M))|F}[VP];{[QS]|[NT]}VD{I|L}V{M(Oxidation (M))|F}[VP];{NN|[MP]|[D{I|L}]|[EV]}VSN{I|L}{M(Oxidation (M))|F}[VP];{NN|[MP]|[D{I|L}]|[EV]}VSV[AG]{M(Oxidation (M))|F}[VP];{NN|[MP]|[D{I|L}]|[EV]}VSQVE[{I|L}T];{NN|[MP]|[D{I|L}]|[EV]}[NS]{I|L}V{M(Oxidation (M))|F}[VP] 7.4289;7.0549;6.5104;6.3893;6.3874;6.2646;6.2049;6.1364;6.0872;6.0445 -;-;-;-;-;+;-;-;-;- + 2298 1 1.722 66203.1 1.0 14696 5879 20575 HBL1_DMSO_200M_050219_1,20577 HBL1_DMSO_200M_050219_1,20577,QSVDLVFPV True True QSVDLVFPV 100.40926 1003.54680174589 34457640.0 20575.0 nc|ENSG00000166452|Q9NQ31-3|AKIP1;;ENSG00000166452|ENST00000309377|AKIP1;;nc|ENSG00000166452|Q9NQ31-2|AKIP1 5.630335807800293 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20578 100.42 321.0 556160.0 25 0 51373.0 + 14014 IAFAITAI 8 138 819.4983858111563 818.4911093445562 1 819.4998657107353 MULTI CID FTMS 0 0 0 20575 214609.703125 0.1762926318186831 -4 0.2695388793945312 3 Unmodified _IAFAITAI_ ENSG00000231500|ENST00000439602|RPS18;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 104.31058478835162 0.0751567137887263 3 [{I|L}A]{M(Oxidation (M))|F}AT{I|L}A{I|L} 8 2 + 68.31 0.0 0.0 8.3458 8.3458 83.064 0.0 0.0 0.0 7.888246217942701 16.40978057358332 7.888246217942701 0.8534811358448735 0 0.6203715150305281 1.0457574905606752 1.305462187404089 0.0 [{I|L}A]{M(Oxidation (M))|F}AT{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}ATA{I|L}{I|L};[{I|L}A]{M(Oxidation (M))|F}A{I|L}TA{I|L};[{I|L}A]TA{M(Oxidation (M))|F}{I|L}A{I|L};[{I|L}A]TA{M(Oxidation (M))|F}A{I|L}{I|L};[{I|L}A]A{M(Oxidation (M))|F}T{I|L}A{I|L};[{I|L}T]AA{M(Oxidation (M))|F}{I|L}A{I|L};[{I|L}A]A{M(Oxidation (M))|F}TA{I|L}{I|L};[{I|L}T]AA{M(Oxidation (M))|F}A{I|L}{I|L};[{I|L}A]{M(Oxidation (M))|F}TA{I|L}A{I|L} 8.3458;8.2415;8.1081;7.597;7.4928;7.3951;7.382;7.2908;7.2778;7.2582 -;-;+;-;-;-;-;-;-;- + 1590 1 1.722 119134.7 1.0 14697 5879 20575 HBL1_DMSO_200M_050219_1,20578 HBL1_DMSO_200M_050219_1,20578,IAFAITAI True True IAFAITAI 100.41514 819.499865710735 8131611.5 20575.0 ENST00000496813.5_1_6:33239896-33244045:+|nuORF;;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;;ENSG00000231500|ENST00000439602|RPS18 2.549009164174398 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20579 100.43 800.0 155840.0 25 0 9738.3 + 25133 MQDPMEVFV 9 109 1095.4829741369751 1094.4756976703752 1 1096.485644519329 MULTI CID FTMS 0 0 0 20575 186618.421875 1.0 0 0.0 4 Unmodified _MQDPMEVFV_ ENSG00000123136|ENST00000242776|DDX39A;nc|ENSG00000123136|O00148-2|DDX39A 7.608950283845883 0.6490595679007971 3 [DN]QVDC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V] 9 6 + 29.332 0.0 0.0 2.68 2.68 70.003 0.0 0.0 0.0 2.218487496163561 5.642492736872601 2.218487496163561 2.218487496163561 0 0.0 0.0 0.0 0.0 [DN]QVDC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}NVDC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V];[DN]QDVC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}EVDC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}NDVC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}EDVC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V];[DN]QVD[CG]V[{M(Oxidation (M))|F}V];[DN][AG]VDC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V];[DN]QDQMV[{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}GGVDC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V] 2.68;2.4773;2.4049;2.4049;2.2022;2.1299;1.8386;1.8386;1.7663;1.6359 -;-;-;-;-;-;-;-;-;- 833 1 1.722 76312.1 0.9200000166893004 14698 5879 20575 HBL1_DMSO_200M_050219_1,20579 HBL1_DMSO_200M_050219_1,20579,MQDPMEVFV False True MQDPMEVFV 100.429 1096.48564451933 3321675.0 20575.0 nc|ENSG00000123136|O00148-2|DDX39A;;ENSG00000123136|ENST00000242776|DDX39A 5.590332825978597 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20580 100.44 633.0 287800.0 25 0 29041.0 + 21159 LPASVLFV 8 120 845.513314007012 844.506037540412 1 845.5140258669853 MULTI CID FTMS 0 0 0 20575 157437.328125 0.887903552208495 -4 0.2695388793945312 5 Unmodified _LPASVLFV_ ENSG00000134490|ENST00000383233|TMEM241;ENST00000577531.5_1_18:20948694-21017816:-|nuORF;nc|ENSG00000134490|Q24JQ0-2|TMEM241;nc|ENSG00000134490|Q24JQ0-3|TMEM241 98.80718514221952 0.0867704633024581 3 [{I|L}P]ASV{I|L}{M(Oxidation (M))|F}V 8 0 + 75.538 0.0 0.0 8.9446 8.9446 91.872 0.0 0.0 0.0 14.025938589933787 16.409780573583312 14.025938589933787 6.817496819840642 0 0.5649093276264391 1.3979400086720375 1.555462187404089 0.0 + + [{I|L}P]ASV{I|L}{M(Oxidation (M))|F}V;[{I|L}P]ASV{M(Oxidation (M))|F}{I|L}V;[{I|L}P][SG]{I|L}{I|L}{M(Oxidation (M))|F}V;[TP]GV{I|L}{I|L}{M(Oxidation (M))|F}V;[PS]AV{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P][SG]{I|L}{M(Oxidation (M))|F}{I|L}V;[TP]G{I|L}V{I|L}{M(Oxidation (M))|F}V;[KP]E{I|L}{I|L}{M(Oxidation (M))|F}V;[TP]GV{I|L}{M(Oxidation (M))|F}{I|L}V;[{I|L}P]ASV{M(Oxidation (M))|F}V{I|L} 8.9446;8.1373;7.4797;7.2838;7.1201;6.6725;6.601;6.5001;6.4765;6.4503 +;-;-;-;-;-;-;-;-;- + 729 1 1.722 125097.5 1.0 14699 5879 20575 HBL1_DMSO_200M_050219_1,20580 HBL1_DMSO_200M_050219_1,20580,LPASVLFV True True LPASVLFV 100.44007 845.514025866985 1849443.0 20575.0 nc|ENSG00000134490|Q24JQ0-3|TMEM241;;ENSG00000134490|ENST00000383233|TMEM241;;nc|ENSG00000134490|Q24JQ0-2|TMEM241;;ENST00000577531.5_1_18:20948694-21017816:-|nuORF 5.7851456006368 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20581 100.45 339.0 445920.0 25 0 21593.0 -1 0 127 917.095871020223 2748.2657836608687 3 917.757373034954 MULTI CID FTMS 0 0 0 20575 160571.71875 0.0242004193996153 20 -1.6926803588867188 6 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 35.249 0.0 0.0 1.2826 0.0 0.0 0.0 1707.653862430957 1707.653862430957 9.893130341597251 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.2826 - 1609 1 1.722 102275.1 1.0 14700 5879 20575 HBL1_DMSO_200M_050219_1,20581 HBL1_DMSO_200M_050219_1,20581, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20582 100.46 623.0 289930.0 25 0 19796.0 + 10128 LIFPGEKVLL 10 146 564.3527799952674 1126.691007057335 2 564.8553344607353 MULTI CID FTMS 0 0 0 20575 142746.125 0.5265308799494295 -4 0.2695388793945312 7 Unmodified _FPWPKVLKI_ ENSG00000174177|ENST00000453996|CTU2;ENST00000566637.5_1_16:88776385-88780917:+|nuORF;ENST00000565071.1_1_16:88773559-88777122:+|nuORF;nc|ENSG00000174177|Q2VPK5-5|CTU2 36.506200033944 0.094635877243972 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WKPV{I|L}K{I|L} 9 2 + 37.946 0.0 0.0 3.3679 3.3679 73.19 0.0 0.0 0.0 3.84286745032815 3.84286745032815 3.84286745032815 3.252574989159953 0 1.1624379954164592 1.5228787452803376 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WKPV{I|L}K{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KWPV{I|L}K{I|L};[WP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K[KT]Q;[WP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F}PK{I|L};[WP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KP{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WKPVK{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPG{[QV]|[N{I|L}]|[RA]|[KV]}NK{I|L};[WP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WKPV{I|L}{I|L}K;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KWPVK{I|L}{I|L} 3.3679;3.0792;3.0268;3.0092;2.9538;2.878;2.8686;2.7975;2.6903;2.5893 -;-;-;-;-;-;-;-;-;- 3558 + 1 1.722 139622.4 1.0 14701 5879 20575 HBL1_DMSO_200M_050219_1,20582 HBL1_DMSO_200M_050219_1,20582,FPWPKVLKI True True LIFPGEKVLL 100.45712 564.855334460735 4669844.0 20575.0 ENSG00000174177|ENST00000453996|CTU2;;ENST00000566637.5_1_16:88776385-88780917:+|nuORF;;ENST00000565071.1_1_16:88773559-88777122:+|nuORF;;nc|ENSG00000174177|Q2VPK5-5|CTU2 6.804118633270264 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20583 100.46 156.0 178410.0 25 0 13564.0 -1 0 71 1084.602465808392 0 1084.602465808392 PEAK CID FTMS 0 0 0 -1 0 8 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.32252 0.0 0.0 1143.588280150184 873.5370577447874 2017.125337894972 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.32252 - 3 + 1 1.722 28039.8 1.0 14702 5879 20575 HBL1_DMSO_200M_050219_1,20583 HBL1_DMSO_200M_050219_1,20583, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20585 100.47 94.0 1014400.0 25 0 136800.0 + 8263 EQIKDIFYI 9 116 584.8165257506329 1167.6184985680657 2 584.8157836794853 MULTI CID FTMS 0 0 0 20584 324927.625 0.4443184691938806 4 -0.265045166015625 1 Unmodified _EQIKDIFYI_ ENSG00000164902|ENST00000297540|PHAX 47.74868867922204 0.0453060283459952 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}Y{I|L} 9 0 + 31.562 0.0 0.0 2.7031 2.7031 73.51 0.0 0.0 0.0 4.60730838531493 7.191964632593585 4.60730838531493 4.60730838531493 0 0.7429928190999391 0.0 2.2302046884880937 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}Y{I|L};[AG]E{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DK{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}Q{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}Y{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[AG]E{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]EK{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L};[DP]{I|L}KV{[CA]|SS}{M(Oxidation (M))|F}Y{I|L} 2.7031;2.3085;1.8572;1.8275;1.8041;1.8041;1.7506;1.4095;1.3808;1.3688 +;-;-;-;-;-;-;-;-;- + 1262 1 1.726 75936.0 1.0 14703 5880 20584 HBL1_DMSO_200M_050219_1,20585 HBL1_DMSO_200M_050219_1,20585,EQIKDIFYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20586 100.47 201.0 886420.0 25 0 297080.0 + 20392 LLGSEIKLI 9 116 493.3183483650863 984.6221437969726 2 493.3184387087822 MULTI CID FTMS 0 0 0 20584 391136.4375 0.4750165165502513 4 -0.265045166015625 2 Unmodified _LLGSEIKLI_ ENSG00000133138|ENST00000357242|TBC1D8B;nc|ENSG00000133138|Q0IIM8-2|TBC1D8B;nc|ENSG00000133138|Q0IIM8-3|TBC1D8B 85.35673624503755 0.0162188719545379 3 {I|L}{I|L}GSSG{I|L}{I|L}{I|L}{I|L} 10 3 + 93.629 0.0 0.0 9.5091 9.5091 92.913 0.0 0.0 0.0 8.196664623252701 16.53212513775344 8.196664623252701 7.658467447160987 0 0.9247425010840048 1.6989700043360187 2.1016784832448856 0.0 {I|L}{I|L}GSSG{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}GSS{I|L}G{I|L}{I|L}{I|L};[{I|L}T]KDG{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}GDTK{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}{I|L}SSG{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}GSEK{I|L}{I|L}{I|L};[KT]{I|L}DG{I|L}{I|L}{I|L}{I|L};[K{I|L}]TDG{I|L}{I|L}{I|L}{I|L};[{I|L}T]KD{I|L}G{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}S{I|L}SG{I|L}{I|L}{I|L}{I|L} 9.5091;8.7313;8.6767;8.3357;8.1525;7.9781;7.9284;7.9284;7.8989;7.7663 -;-;-;-;-;-;-;-;-;- 3327 1 1.726 137846.0 1.0 14704 5880 20584 HBL1_DMSO_200M_050219_1,20586 HBL1_DMSO_200M_050219_1,20586,LLGSEIKLI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20587 100.48 800.0 482450.0 25 0 37992.0 + 22445 LPTSLLTI 8 184 857.531130777804 856.523854311204 1 857.5364868044853 MULTI CID FTMS 0 0 0 20584 286021.75 0.6607755364151539 4 -0.265045166015625 3 Unmodified _LPTSLLTI_ ENSG00000135912|ENST00000392102|TTLL4 70.71552829651908 0.111000043122623 3 [TP]S{I|L}{I|L}{I|L}T{I|L} 8 2 + 82.381 0.0 0.0 9.618 9.618 93.349 0.0 0.0 0.0 11.974759210558531 14.904630595263429 11.974759210558531 8.158103586936463 0 0.2059771852360797 0.8860566476931632 2.332438536731469 0.0 [TP]S{I|L}{I|L}{I|L}T{I|L};[TP]S{I|L}{I|L}T{I|L}{I|L};[TP]{I|L}S{I|L}{I|L}T{I|L};[VG]E{I|L}{I|L}{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{I|L}{I|L}{I|L}T{I|L};[TP]TV{I|L}{I|L}T{I|L};[{I|L}P]TS{I|L}{I|L}T{I|L};{[VA]|[{I|L}G]}D{I|L}{I|L}{I|L}T{I|L};[PS]T{I|L}{I|L}{I|L}T{I|L};[TP]{I|L}S{I|L}T{I|L}{I|L} 9.618;8.6656;8.3575;8.22;8.1543;8.0595;8.0263;7.6521;7.5616;7.405 -;-;-;-;-;-;+;-;-;- + 2936 1 1.726 250118.9 0.9100000262260436 14705 5880 20584 HBL1_DMSO_200M_050219_1,20587 HBL1_DMSO_200M_050219_1,20587,LPTSLLTI True True LPTSLLTI 100.48369 857.536486804485 4432973.0 20584.0 ENSG00000135912|ENST00000392102|TTLL4 2.7028613090515137 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20588 100.5 800.0 329000.0 25 0 71555.0 + 10120 FPWPKVLKI 9 145 376.570766370445 1126.6904697115351 3 376.5708190798759 MULTI CID FTMS 0 0 0 20584 134193.28125 0.2989284149498978 -8 0.4938278198242187 4 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 57.72198328787511 0.0273433238377839 3 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 58.195 0.0 0.0 5.1652 5.1652 78.708 0.0 0.0 0.0 13.346755565910442 3.4948500216800937 3.4948500216800937 3.4948500216800937 0 0.6139829889124311 0.0 0.0 1.055462187404089 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K;[YV]{I|L}K{I|L}[HN]K{I|L};[YV]{I|L}K{I|L}[HN]{I|L}K;[YV]{I|L}K[HN]{I|L}K{I|L};[YV]{I|L}K[HN]{I|L}{I|L}K;[YV][HQ]KV{I|L}K{I|L};[YV][HQ]KV{I|L}{I|L}K 5.1652;4.855;2.0141;1.7039;1.5867;1.2765;0.84407;0.53388 +;-;-;-;-;-;-;- + 796 + 1 1.726 216961.5 0.4900000095367431 14706 5880 20584 HBL1_DMSO_200M_050219_1,20588 HBL1_DMSO_200M_050219_1,20588,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20589 100.51 800.0 158470.0 25 0 11449.0 -1 0 119 688.0735427739423 2748.265065229369 4 688.5744506716728 MULTI CID FTMS 0 0 0 20584 109226.359375 0.0222861316745598 21 -1.8794708251953125 5 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 56.819 0.0 0.0 2.0675 0.0 0.0 0.0 1707.6474864542315 1707.6474864542315 26.03408749299639 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3252574989159953 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.0675 - 2339 1 1.726 98277.3 0.5 14707 5880 20584 HBL1_DMSO_200M_050219_1,20589 HBL1_DMSO_200M_050219_1,20589, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20591 100.52 509.0 358120.0 25 0 78128.0 + 25104 MPYNYPVLL 9 146 555.2890545850029 1108.5635562368057 2 555.2881957888603 MULTI CID FTMS 0 0 0 20590 100147.4453125 0.1736481481682167 -2 0.11639404296875 1 Unmodified _MPYNYPVLL_ ENSG00000102786|ENST00000311234|INTS6;ENSG00000165359|ENST00000639893|INTS6L;nc|ENSG00000102786|Q9UL03-3|INTS6;nc|ENSG00000165359|Q5JSJ4|INTS6L 63.562846038646086 0.0241094678104353 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYMPV{I|L}{I|L} 9 2 + 81.704 0.0 0.0 7.3703 7.3703 84.188 0.0 0.0 0.0 5.821724738142194 10.330145895351848 5.821724738142194 2.768024924119672 0 1.1989700043360187 0.958607314841775 0.4194451763165202 1.7059771852360797 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NMYPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MNYPV{I|L}{I|L};[YN]PYMPV{I|L}{I|L};[YN]PMYPV{I|L}{I|L};[YN]NNYPV{I|L}{I|L};[YN]GGNYPV{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}YNYPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPMV{I|L}{I|L};[YN]YPMPV{I|L}{I|L} 7.3703;7.1206;6.899;6.8451;6.5954;6.0983;5.7482;5.7149;5.6955;5.6802 -;-;-;-;-;-;-;+;-;- + 4869 1 1.726 145603.2 1.0 14708 5881 20590 HBL1_DMSO_200M_050219_1,20591 HBL1_DMSO_200M_050219_1,20591,MPYNYPVLL True True MPYNYPVLL 100.52265 555.28819578886 18077775.0 20590.0 ENSG00000165359|ENST00000639893|INTS6L;;ENSG00000102786|ENST00000311234|INTS6;;nc|ENSG00000102786|Q9UL03-3|INTS6;;nc|ENSG00000165359|Q5JSJ4|INTS6L 6.247861226399739 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20592 100.53 113.0 1085700.0 25 0 162130.0 + 32513 SALPDIKVLTL 11 108 585.3607569749753 1168.7069610167505 2 585.3611328005791 MULTI CID FTMS 0 0 0 20590 482910.5 0.152200620576736 -3 0.127899169921875 2 Unmodified _SALPDIKVLTL_ ENSG00000115241|ENST00000344034|PPM1G;ENST00000472077.1_1_2:27604468-27607956:-|nuORF 35.61225514009592 0.279986979807413 3 [DP]{I|L}KV{I|L}T{I|L} 8 3 54.712 0.0 0.0 4.6814 0.0 0.0 0.0 286.1412790030751 286.1412790030751 7.087298416251748 0.0 0.0 0.0 0 0.0 0.958607314841775 0.8494850021680094 0.0 + [DP]{I|L}KV{I|L}T{I|L} 4.6814 + + 924 1 1.726 95387.2 1.0 14709 5881 20590 HBL1_DMSO_200M_050219_1,20592 HBL1_DMSO_200M_050219_1,20592,SALPDIKVLTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20594 100.53 15.0 4647600.0 25 0 961250.0 + 1308 AIVDLIHDI 9 68 504.78979529645216 1007.5650376597044 2 504.7901183962822 MULTI CID FTMS 0 0 0 20593 3693202.25 0.5978073746095668 -1 0.01361083984375 1 Unmodified _AIVDLIHDI_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 48.345845343767074 0.0439967357579942 3 [{I|L}A]VD{I|L}{I|L}{I|L}[HD] 9 2 + 77.202 0.0 0.0 7.6622 7.6622 96.438 0.0 0.0 0.0 38.48567391607766 18.56923330479504 18.56923330479504 39.91135616519784 0 0.805462187404089 2.0 1.805462187404089 0.0 [{I|L}A]VD{I|L}{I|L}{I|L}[HD];[H{I|L}]D{I|L}VD{I|L}[{I|L}A];[DV]{I|L}{I|L}HD{I|L}[{I|L}A];[H{I|L}]{I|L}DVD{I|L}[{I|L}A];[{I|L}V]D{I|L}HD{I|L}[{I|L}A];[H{I|L}]D{I|L}DV{I|L}[{I|L}A];[HD]{I|L}{I|L}VD{I|L}[{I|L}A];[H{I|L}]{I|L}DDV{I|L}[{I|L}A];[HD]{I|L}{I|L}DV{I|L}[{I|L}A];[DV]{I|L}{[YC]|[HE]}V{I|L}[{I|L}A] 7.6622;3.701;3.6049;3.4809;3.2851;3.1035;3.0859;2.8833;2.4884;1.9186 -;-;-;-;-;-;-;-;-;- 285 + 1 1.726 58769.2 1.0 14710 5882 20593 HBL1_DMSO_200M_050219_1,20594 HBL1_DMSO_200M_050219_1,20594,AIVDLIHDI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20595 100.53 53.0 1802000.0 25 0 193770.0 + + 2366 SQLWKLPGL 9 105 520.3051862679811 1038.595819602762 2 521.3084594607353 MULTI CID FTMS 0 0 0 20593 881926.5625 0.7307364584999101 -1 0.01361083984375 2 Unmodified _AQLRPERGL_ ENSG00000155561|ENST00000285968|NUP205 12.531546534597751 0.4974689918368763 3 {[QS]|[NT]}{I|L}W 4 -1 26.148 0.0 0.0 2.5176 0.0 0.0 0.0 521.3156431713745 521.3156431713745 4.872439728367503 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.1462566630072955 0.6549471895720984 {[QS]|[NT]}{I|L}W 2.5176 - 300 1 1.726 76586.4 1.0 14711 5882 20593 HBL1_DMSO_200M_050219_1,20595 HBL1_DMSO_200M_050219_1,20595,AQLRPERGL False False SQLWKLPGL 100.5309 521.308459460735 15341761.0 20593.0 ENSG00000155561|ENST00000285968|NUP205 4.936567942301433 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20596 100.53 107.0 1258600.0 25 0 174630.0 + -1 LACFSCLTY 9 120 539.2405706935616 1076.4665884539231 2 539.2410766482353 MULTI CID FTMS 0 0 0 20593 614933.0 0.7189707659772856 -1 0.01361083984375 3 Carbamidomethyl (C) _LACFSC(Carbamidomethyl (C))LTY_ REV__ENST00000520248.1_1_8:79672597-79674655:-|nuORF 32.116972079565 0.1225432171549407 3 [{I|L}A]{M(Oxidation (M))|F}GT{M(Oxidation (M))|F}S 7 -1 60.411 0.0 0.0 5.6119 0.0 0.0 0.0 350.0851836291672 350.0851836291672 30.586229183695647 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.5228787452803376 0.0 [{I|L}A]{M(Oxidation (M))|F}GT{M(Oxidation (M))|F}S 5.6119 - 424 + 1 1.726 105153.5 1.0 14712 5882 20593 HBL1_DMSO_200M_050219_1,20596 HBL1_DMSO_200M_050219_1,20596,LACFSCLTY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20597 100.54 104.0 882750.0 25 0 99068.0 + + -1 RILDGMFAI 9 79 518.2862069990716 1034.5578610649432 2 518.2867919802666 MULTI CID FTMS 0 0 0 20593 476715.40625 0.6264462365326461 -1 0.01361083984375 4 Carbamidomethyl (C) _LWC(Carbamidomethyl (C))IIFAL_ nc|ENSG00000170445|P12081-3|HARS1;nc|ENSG00000170445|P12081-2|HARS1;nc|ENSG00000170445|P12081-4|HARS1;ENSG00000170445|ENST00000504156|HARS1;ENST00000506579.5_1_5:140056223-140057407:-|nuORF 24.20995872069341 0.5349487244130675 3 GM{M(Oxidation (M))|F}A{I|L} 5 -1 50.573 0.0 0.0 4.8884 0.0 0.0 497.29692061741264 0.0 497.29692061741264 0.0 39.604093769761874 0.0 0.0 0 1.2614393726401687 0.0 0.0 0.0 GM{M(Oxidation (M))|F}A{I|L} 4.8884 - 54 1 1.726 74679.9 1.0 14713 5882 20593 HBL1_DMSO_200M_050219_1,20597 HBL1_DMSO_200M_050219_1,20597,LWCIIFAL False False RILDGMFAI 100.53542 518.286791980267 10088914.0 20593.0 nc|ENSG00000170445|P12081-3|HARS1;;nc|ENSG00000170445|P12081-2|HARS1;;nc|ENSG00000170445|P12081-4|HARS1;;ENSG00000170445|ENST00000504156|HARS1;;ENST00000506579.5_1_5:140056223-140057407:-|nuORF 4.4825325806935625 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20598 100.54 175.0 666290.0 25 0 91953.0 + 1865 ALVPVFAHL 9 84 483.7922416384986 965.5699303437972 2 483.7924682497978 MULTI CID FTMS 0 0 0 20593 345979.3125 0.116941062236476 6 -0.3615646362304687 5 Unmodified _ALVPVFAHL_ ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 36.46614268402704 0.0948557732959553 3 [{I|L}A]VMH{I|L} 6 4 44.13 0.0 0.0 4.5703 0.0 0.0 0.0 298.1763505920973 298.1763505920973 16.962724883926654 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [{I|L}A]VMH{I|L} 4.5703 - 197 1 1.726 91924.0 1.0 14714 5882 20593 HBL1_DMSO_200M_050219_1,20598 HBL1_DMSO_200M_050219_1,20598,ALVPVFAHL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20599 100.54 250.0 594450.0 25 0 64087.0 + 37695 TLPDLVPQL 9 117 498.2923468470252 994.5701407608504 2 498.2921935915947 MULTI CID FTMS 0 0 0 20593 325565.375 0.2844531481570067 -1 0.01361083984375 6 Unmodified _TLPDLVPQL_ ENSG00000163811|ENST00000407426|WDR43 57.47134341890925 0.0274820932774257 3 VPQ{I|L} 4 5 31.319 0.0 0.0 3.149 0.0 0.0 539.2924440829191 0.0 539.2924440829191 0.0 8.694028404633158 0.0 0.0 0 0.6549471895720985 0.0 0.0 0.6861818737241735 + VPQ{I|L} 3.149 + + 989 + 1 1.726 114648.7 1.0 14715 5882 20593 HBL1_DMSO_200M_050219_1,20599 HBL1_DMSO_200M_050219_1,20599,TLPDLVPQL True True TLPDLVPQL 100.54348 498.292193591595 7325989.0 20593.0 ENSG00000163811|ENST00000407426|WDR43 4.643162727355957 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20600 100.55 161.0 620370.0 25 0 96665.0 + 16449 KAIEVLLTL 9 108 500.3260045775757 998.6374562219512 2 500.3264648318291 MULTI CID FTMS 0 0 0 20593 290023.78125 0.1151885407324913 6 -0.3615646362304687 7 Unmodified _KAIEVLLTL_ ENSG00000163507|ENST00000295746|CIP2A;ENST00000487834.5_1_3:108281971-108308222:-|nuORF;nc|ENSG00000163507|Q8TCG1-2|CIP2A 51.629811660486645 0.0367964933207742 3 [{I|L}T]{I|L}NV{I|L}{I|L}T{I|L} 9 3 + 80.614 0.0 0.0 8.0724 8.0724 91.471 0.0 0.0 0.0 7.742275032520141 10.769921747127498 7.742275032520141 7.742275032520141 0 0.5 1.5228787452803376 0.8807196863200843 0.5994850021680094 [{I|L}T]{I|L}NV{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}VAK{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}AKV{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}AVK{I|L}{I|L}T{I|L};[{I|L}T]{I|L}GGV{I|L}{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}AK{I|L}{I|L}T{I|L};[{I|L}A]KEV{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}VA{I|L}K{I|L}T{I|L};{I|L}{I|L}TNV{I|L}{I|L}T{I|L};[{I|L}T][TP]K{I|L}{I|L}T{I|L} 8.0724;7.2971;7.1222;6.8987;6.55;6.5302;6.451;6.4509;6.2885;6.2727 -;-;-;-;-;-;-;-;-;- 2795 1 1.726 81609.6 1.0 14716 5882 20593 HBL1_DMSO_200M_050219_1,20600 HBL1_DMSO_200M_050219_1,20600,KAIEVLLTL True True KAIEVLLTL 100.54665 500.3267 60913266.0 20593.0 ENSG00000163507|ENST00000295746|CIP2A;;ENST00000487834.5_1_3:108281971-108308222:-|nuORF;;nc|ENSG00000163507|Q8TCG1-2|CIP2A 2.5101726055145264 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20601 100.55 174.0 563260.0 25 0 51321.0 + 34733 SPYPWPLNHI 10 102 612.3146212862029 0 612.3152953982353 PEAK CID FTMS 0 0 0 20593 288734.78125 0.3876192988537023 8 -0.5355072021484375 8 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 69.10491478415734 0.0102352797086572 3 YPW{I|L}PN 6 6 41.917 0.0 0.0 3.4285 0.0 0.0 184.0893351596993 265.1308992975219 449.2202344572212 0.0 0.0 0.0 0.0 0 1.4489700043360187 0.0 0.0 0.7742275032520141 YPW{I|L}PN 3.4285 - 295 + 1 1.726 76265.8 1.0 14717 5882 20593 HBL1_DMSO_200M_050219_1,20601 HBL1_DMSO_200M_050219_1,20601,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20602 100.55 169.0 648480.0 25 0 54423.0 + 21505 LPIDDVLRI 9 82 527.318438465863 1052.622323998526 2 527.3189575076103 MULTI CID FTMS 0 0 0 20593 268851.90625 0.568867437344158 6 -0.3615646362304687 9 Unmodified _LPIDDVLRI_ ENSG00000113851|ENST00000231948|CRBN;ENST00000459840.5_1_3:3192551-3196584:-|nuORF;nc|ENSG00000113851|Q96SW2-2|CRBN 43.77239144664712 0.0547478964384323 3 {I|L}P{I|L}DDV{I|L}R{I|L} 9 0 + 85.276 0.0 0.0 8.1013 8.1013 96.2 0.0 0.0 0.0 65.3107057176711 11.471449248951942 11.471449248951942 20.268024924119672 0 1.048455006504028 2.0 0.0 0.0 + + {I|L}P{I|L}DDV{I|L}R{I|L};{I|L}{I|L}PDDV{I|L}R{I|L} 8.1013;6.1758 +;- + 308 + 1 1.726 96112.0 1.0 14718 5882 20593 HBL1_DMSO_200M_050219_1,20602 HBL1_DMSO_200M_050219_1,20602,LPIDDVLRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20603 100.56 132.0 843550.0 25 0 55016.0 + 24526 MISELLPLN 9 125 515.2868147963536 1028.5590766595071 2 515.2865478396416 MULTI CID FTMS 0 0 0 20593 215388.375 0.2538801618602853 6 -0.3615646362304687 10 Unmodified _MISELLPLN_ REV__ENST00000066544.7_1_17:45197960-45198047:-|nuORF 85.35673624503755 0.0162188719545379 3 {[TV]|[{I|L}S]}E{I|L}M{I|L} 6 -1 51.818 0.0 0.0 5.0379 0.0 0.0 0.0 339.1675110679634 339.1675110679634 20.64216836711532 0.0 0.0 0.0 0 0.7742275032520141 1.154901959985743 1.6407209767379802 0.0 {[TV]|[{I|L}S]}E{I|L}M{I|L} 5.0379 - 1001 1 1.726 94108.9 1.0 14719 5882 20593 HBL1_DMSO_200M_050219_1,20603 HBL1_DMSO_200M_050219_1,20603,MISELLPLN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20604 100.57 800.0 220940.0 25 0 23433.0 + + -1 YPDIARYLI 9 163 562.2565133516214 1122.498473770043 2 562.2570678591728 MULTI CID FTMS 0 0 0 20593 134821.484375 0.5426907111856398 -1 0.01361083984375 11 2 Carbamidomethyl (C) _GLC(Carbamidomethyl (C))LC(Carbamidomethyl (C))CVWL_ ENSG00000182676|ENST00000330261|PPP1R27 14.581692164780916 0.4419739649577144 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}G{I|L} 7 -1 45.916 0.0 0.0 4.0906 0.0 0.0 0.0 350.08295215170057 350.08295215170057 23.031738374125005 0.0 0.0 0.0 0 0.5 0.0 1.960409376976188 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}G{I|L} 4.0906 - 1414 1 1.726 138159.8 0.9800000190734864 14720 5882 20593 HBL1_DMSO_200M_050219_1,20604 HBL1_DMSO_200M_050219_1,20604,GLCLCCVWL False False YPDIARYLI 100.56989 562.257067859173 259019.296875 20593.0 ENSG00000182676|ENST00000330261|PPP1R27 0.2927358274658521 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20605 100.58 464.0 448700.0 25 0 73949.0 + 1528 ALITRIFGV 9 127 495.3112217665337 988.6078905998676 2 495.3105041384697 MULTI CID FTMS 0 0 0 20593 130127.4140625 0.2331867701778693 -1 0.01361083984375 12 Unmodified _ALITRIFGV_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;ENST00000436947.1_1_2:43711555-43732871:-|nuORF;nc|ENSG00000115970|Q6YHU6-3|THADA 70.33199760932243 0.0209706178985989 3 A{I|L}{I|L}TR{I|L}{M(Oxidation (M))|F}GV 9 0 + 95.038 0.0 0.0 9.6133 9.6133 94.858 0.0 0.0 0.0 44.04437653588236 12.587418566968154 12.587418566968154 9.208187539523747 0 2.504432191740108 2.0 0.3494850021680094 0.0 + + A{I|L}{I|L}TR{I|L}{M(Oxidation (M))|F}GV;A{I|L}{I|L}T[VG]{I|L}{M(Oxidation (M))|F}GV;A{I|L}{I|L}HA{I|L}RPV;A{I|L}H{I|L}A{I|L}RPV;A{I|L}{I|L}VSA{I|L}{M(Oxidation (M))|F}GV;A{I|L}V{I|L}SA{I|L}{M(Oxidation (M))|F}GV;[{I|L}A]{I|L}VSA{I|L}{M(Oxidation (M))|F}GV;[{I|L}A]VVTA{I|L}{M(Oxidation (M))|F}GV;A{I|L}{I|L}TR[R{M(Oxidation (M))|F}]{I|L};A{I|L}{I|L}HRP[{I|L}A]V 9.6133;8.6819;8.487;8.3031;8.2967;7.9651;7.308;7.2409;6.4332;6.2705 +;-;-;-;-;-;-;-;-;- + 1281 + 1 1.726 160123.2 1.0 14721 5882 20593 HBL1_DMSO_200M_050219_1,20605 HBL1_DMSO_200M_050219_1,20605,ALITRIFGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20606 100.59 659.0 397910.0 25 0 38288.0 + 38896 TVLEALQQL 9 163 507.7951328667489 1013.575712800298 2 507.7954284548759 MULTI CID FTMS 0 0 0 20593 120173.7421875 0.339079004136338 -1 0.01361083984375 13 Unmodified _TVLEALQQL_ ENSG00000163930|ENST00000460680|BAP1 104.79918948944588 0.0084531067040494 3 {[TV]|[{I|L}S]}{I|L}EA{I|L} 6 3 60.509 0.0 0.0 5.9699 0.0 0.0 0.0 384.1865154881594 384.1865154881594 11.038977010996568 0.0 0.0 0.0 0 0.6307196863200843 2.0 1.683324508278978 0.0 + {[TV]|[{I|L}S]}{I|L}EA{I|L} 5.9699 + + 2043 1 1.726 201815.4 1.0 14722 5882 20593 HBL1_DMSO_200M_050219_1,20606 HBL1_DMSO_200M_050219_1,20606,TVLEALQQL True True TVLEALQQL 100.58957 507.795428454876 4502601.0 20593.0 ENSG00000163930|ENST00000460680|BAP1 5.160980701446533 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20607 100.6 800.0 422700.0 25 0 85073.0 + 15240 IPFVAPPLV 9 126 476.7971811594156 951.5798093856312 2 476.7968627810478 MULTI CID FTMS 0 0 0 20593 114737.140625 0.2321036969943627 -1 0.01361083984375 14 Unmodified _IPFVAPPLV_ ENSG00000159596|ENST00000372025|TMEM69 79.93452657146344 0.0175326119056068 3 [{I|L}P]{M(Oxidation (M))|F}G{I|L}PP{I|L}V 9 2 + 76.225 0.0 0.0 8.0104 8.0104 86.149 0.0 0.0 0.0 3.0102999566398125 14.09256854528806 3.0102999566398125 3.0102999566398125 0 1.416386562212267 2.0 0.0 0.0 [{I|L}P]{M(Oxidation (M))|F}G{I|L}PP{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VA{I|L}PP{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}G{I|L}PP{I|L}V;[{I|L}P]{M(Oxidation (M))|F}VAPP{I|L}V;[{I|L}P]{M(Oxidation (M))|F}GP{I|L}P{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}APP{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VAP{I|L}P{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VAPP{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}GP{I|L}P{I|L}V;{I|L}{I|L}MG{I|L}PP{I|L}V 8.0104;7.6941;7.3777;7.1927;7.1089;6.8763;6.7926;6.56;6.4762;6.0714 -;-;-;+;-;-;-;-;-;- + 843 1 1.726 262583.1 0.4099999964237213 14723 5882 20593 HBL1_DMSO_200M_050219_1,20607 HBL1_DMSO_200M_050219_1,20607,IPFVAPPLV True True IPFVAPPLV 100.60339 476.796862781048 13207954.5 20593.0 ENSG00000159596|ENST00000372025|TMEM69 2.691676298777262 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20608 100.62 800.0 330440.0 25 0 29728.0 -1 0 160 1000.5552830563032 0 1000.555224597454 PEAK CID FTMS 0 0 0 20593 104749.4453125 1.0 0 0.0 15 3 M{I|L}TA{I|L} 5 -1 25.834 0.0 0.0 1.2923 0.0 0.0 1243.6960495496044 223.07297693424064 1466.769026483845 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 M{I|L}TA{I|L} 1.2923 - 1694 + 1 1.726 168376.7 0.8100000023841858 14724 5882 20593 HBL1_DMSO_200M_050219_1,20608 HBL1_DMSO_200M_050219_1,20608, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20610 100.62 83.0 821380.0 25 0 105250.0 + 1816 ALTELLAKI 9 93 486.3103788438592 970.6062047545184 2 486.3105651736259 MULTI CID FTMS 0 0 0 20609 846615.6875 0.0248690298690725 16 -1.4690093994140625 1 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 71.92227651296345 0.0203558744033348 3 [{I|L}A]TE{I|L}{I|L}AK{I|L} 9 0 + 84.703 0.0 0.0 8.7268 8.7268 98.771 0.0 0.0 0.0 57.64645333192 13.46787486224656 13.46787486224656 84.70290649673359 0 1.610924374808178 2.0 0.0 0.0 + + [{I|L}A]TE{I|L}{I|L}AK{I|L} 8.7268 + + 462 + 1 1.725 55993.8 1.0 14725 5883 20609 HBL1_DMSO_200M_050219_1,20610 HBL1_DMSO_200M_050219_1,20610,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20611 100.63 502.0 146290.0 25 0 8158.8 + 17195 KLLDISELDMV 11 108 638.3468259656536 1274.679098998107 2 638.3470947146416 MULTI CID FTMS 0 0 0 20609 25624.2578125 0.1020736234802026 3 -0.1912002563476562 2 Unmodified _KLLDISELDMV_ ENSG00000185049|ENST00000382882|NELFA;ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF 32.89776655970281 0.3218023389984559 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}SE{I|L}DMV 11 2 + 67.475 0.0 0.0 5.2935 5.2935 84.928 0.0 0.0 0.0 9.197114055627084 16.575773191777927 9.197114055627084 9.197114055627084 0 0.7742275032520141 1.2218487496163564 0.6694451763165201 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}SE{I|L}DMV;{[TV]|[{I|L}S]}{I|L}[VG]{I|L}SE{I|L}DMV;{I|L}{I|L}KD{I|L}SE{I|L}DMV;{[QN]|[E{I|L}]|[KN]}VK{I|L}SE{I|L}DMV;{I|L}{I|L}DK{I|L}SE{I|L}DMV;{NN|[MP]|[D{I|L}]|[EV]}PVT{I|L}AA[{M(Oxidation (M))|F}V]MV;{I|L}{I|L}S[VG]{I|L}SE{I|L}DMV;{NN|[MP]|[D{I|L}]|[EV]}PVT[RV][{M(Oxidation (M))|F}V]MV;{[TV]|[{I|L}S]}PV[{I|L}T]{[MG]|[TS]}{I|L}DMV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[R{I|L}]{[MG]|[TS]}{I|L}DMV 5.2935;4.572;4.244;4.1241;4.0533;3.6343;3.5658;3.3898;3.237;3.136 -;-;-;-;-;-;-;-;-;- 1199 1 1.725 60918.4 1.0 14726 5883 20609 HBL1_DMSO_200M_050219_1,20611 HBL1_DMSO_200M_050219_1,20611,KLLDISELDMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20612 100.63 31.0 1565200.0 25 0 209260.0 + 39165 TYPEFLANAL 10 75 569.7923723696688 1137.5701918061377 2 569.7929565310478 MULTI CID FTMS 0 0 0 20609 1920091.875 1.0 0 0.0 3 Unmodified _TYPEFLANAL_ ENSG00000064703|ENST00000369702|DDX20;ENST00000475700.1_1_1:112303127-112303484:+|nuORF 15.847184025352805 0.5816416552707754 3 [EP]{M(Oxidation (M))|F}{I|L}ANA 7 3 39.781 0.0 0.0 3.497 0.0 0.0 0.0 392.1822272888125 392.1822272888125 15.580371765640422 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 + [EP]{M(Oxidation (M))|F}{I|L}ANA 3.497 + + 307 1 1.725 42299.2 1.0 14727 5883 20609 HBL1_DMSO_200M_050219_1,20612 HBL1_DMSO_200M_050219_1,20612,TYPEFLANAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20613 100.64 73.0 808760.0 25 0 60910.0 + 21395 LPFYFVQKI 9 87 577.8344486033412 1153.6543442734824 2 577.8347045779228 MULTI CID FTMS 0 0 0 20609 556354.6875 0.5243430834548815 -2 0.1072769165039062 4 Unmodified _LPFYFVQKI_ ENSG00000059378|ENST00000263549|PARP12 85.35673624503755 0.0162188719545379 3 {I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQK{I|L} 9 0 + 87.923 0.0 0.0 7.6212 7.6212 86.579 0.0 0.0 0.0 33.46787486224656 3.756636139608858 3.756636139608858 3.756636139608858 0 1.079689690656103 1.6989700043360187 0.0 0.9604093769761876 + + {I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQK{I|L};{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQ{I|L}K;{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}V[AG]K{I|L};{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}V[AG]{I|L}K 7.6212;7.2956;6.823;6.4974 +;-;-;- + 353 + 1 1.725 49442.0 1.0 14728 5883 20609 HBL1_DMSO_200M_050219_1,20613 HBL1_DMSO_200M_050219_1,20613,LPFYFVQKI True True LPFYFVQKI 100.63592 577.834704577923 17884168.0 20609.0 ENSG00000059378|ENST00000263549|PARP12 7.562153339385986 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20614 100.64 222.0 401540.0 25 0 31615.0 + 12960 HAHPFFFTI 9 96 558.7848383071681 1115.555123681136 2 558.7852661013603 MULTI CID FTMS 0 0 0 20609 310732.96875 1.0 0 0.0 5 Unmodified _HAHPFFFTI_ ENSG00000141480|ENST00000269260|ARRB2;ENST00000575131.5_1_17:4619273-4620589:+|nuORF;nc|ENSG00000141480|P32121-2|ARRB2;nc|ENSG00000141480|P32121-3|ARRB2;nc|ENSG00000141480|P32121-5|ARRB2 34.18733598223924 0.1073653526364521 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}HAH{M(Oxidation (M))|F}T{I|L} 9 6 + 41.098 0.0 0.0 3.684 3.684 69.126 0.0 0.0 0.0 11.293709283484072 8.384767769392738 8.384767769392738 0.4845500650402812 0 0.7742275032520141 1.0 0.3054621874040891 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}HAH{M(Oxidation (M))|F}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{M(Oxidation (M))|F}AH{M(Oxidation (M))|F}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}H{M(Oxidation (M))|F}AHT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H[HA]{M(Oxidation (M))|F}{M(Oxidation (M))|F}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{M(Oxidation (M))|F}{M(Oxidation (M))|F}AHT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}HA{M(Oxidation (M))|F}HT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{M(Oxidation (M))|F}A{M(Oxidation (M))|F}HT{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PHAH{M(Oxidation (M))|F}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}HAHT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AH{M(Oxidation (M))|F}T{I|L} 3.684;3.6406;2.9415;2.9272;2.8981;2.7837;2.7402;2.6717;2.5848;2.4743 -;-;-;-;-;-;-;-;-;- 800 1 1.725 73299.3 1.0 14729 5883 20609 HBL1_DMSO_200M_050219_1,20614 HBL1_DMSO_200M_050219_1,20614,HAHPFFFTI True True HAHPFFFTI 100.64012 558.78526610136 2644838.5 20609.0 nc|ENSG00000141480|P32121-5|ARRB2;;nc|ENSG00000141480|P32121-3|ARRB2;;ENST00000575131.5_1_17:4619273-4620589:+|nuORF;;ENSG00000141480|ENST00000269260|ARRB2;;nc|ENSG00000141480|P32121-2|ARRB2 7.7126358350118 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20615 100.64 148.0 401710.0 25 0 65599.0 + 14181 IDGTRLITI 9 86 501.3030275794831 1000.591502225766 2 501.3033935427666 MULTI CID FTMS 0 0 0 20609 242361.578125 0.0017716962081342 36 -2.704437255859375 6 Unmodified _IDGTRLITI_ ENST00000463943.1_1_20:49457108-49457342:+|nuORF 32.78568957990786 0.1150597335874693 3 {[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}{I|L}T{I|L} 9 3 + 58.579 0.0 0.0 5.8544 5.8544 81.062 0.0 0.0 0.0 3.4678748622465605 16.478174818886373 3.4678748622465605 3.4678748622465605 0 0.5 1.6989700043360187 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}{I|L}T{I|L};{[DA]|[EG]}[R{I|L}]S{I|L}{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WK]{I|L}{I|L}T{I|L};[{I|L}A][RD]S{I|L}{I|L}T{I|L};[{I|L}A]N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}T{I|L};{[QG]|[NA]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}T{I|L};[{I|L}A]GG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}T{I|L} 5.8544;5.5078;5.207;4.8604;4.7338;4.4329;3.6638;3.5127 -;-;-;-;-;-;-;- 164 1 1.725 50584.6 1.0 14730 5883 20609 HBL1_DMSO_200M_050219_1,20615 HBL1_DMSO_200M_050219_1,20615,IDGTRLITI True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20616 100.66 800.0 215620.0 25 0 23556.0 + 32070 RVLPGSSVLFL 11 152 594.3608998014735 1186.7072466697468 2 594.3607055544853 MULTI CID FTMS 0 0 0 20609 149101.8125 1.0 0 0.0 7 Unmodified _RVLPGSSVLFL_ ENSG00000063241|ENST00000425675|ISOC2;ENST00000589108.1_1_19:55967712-55972941:-|nuORF;ENST00000591718.1_1_19:55966993-55972941:-|nuORF;nc|ENSG00000063241|Q96AB3-2|ISOC2;nc|ENSG00000063241|Q96AB3-3|ISOC2 30.7034409873982 0.3712764582118616 3 SV{I|L}{M(Oxidation (M))|F}{I|L} 5 6 48.118 0.0 0.0 4.0547 0.0 0.0 609.3627186505875 0.0 609.3627186505875 0.0 32.870156338638594 0.0 0.0 0 0.8252574989159953 0.0 0.8807196863200843 0.0 + SV{I|L}{M(Oxidation (M))|F}{I|L} 4.0547 + + 506 1 1.725 130992.9 0.6299999952316284 14731 5883 20609 HBL1_DMSO_200M_050219_1,20616 HBL1_DMSO_200M_050219_1,20616,RVLPGSSVLFL False True RVLPGSSVLFL 100.6569 594.360705554485 977390.0 20609.0 ENST00000591718.1_1_19:55966993-55972941:-|nuORF;;nc|ENSG00000063241|Q96AB3-2|ISOC2;;nc|ENSG00000063241|Q96AB3-3|ISOC2;;ENSG00000063241|ENST00000425675|ISOC2;;ENST00000589108.1_1_19:55967712-55972941:-|nuORF 6.570488611857097 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20617 100.67 800.0 289030.0 25 0 25204.0 + 15657 IQLPDSVNQLL 11 188 620.348536457024 1238.682519980848 2 620.8476440310478 MULTI CID FTMS 0 0 0 20609 164842.0625 0.6927765777918247 -5 0.2351760864257812 8 Unmodified _IQLPDSVNQLL_ ENSG00000119777|ENST00000238788|TMEM214;ENST00000469445.1_1_2:27263203-27263702:+|nuORF;nc|ENSG00000119777|Q6NUQ4-2|TMEM214 51.41523569358685 0.1097924807909074 3 {[QN]|[E{I|L}]|[KN]}T{I|L}TQ{I|L}VE 9 9 44.795 0.0 0.0 3.6164 0.0 0.0 0.0 209.05721460513908 209.05721460513908 6.935388172471342 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.9559771852360796 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}T{I|L}TQ{I|L}VE 3.6164 - 25505 + 1 1.725 168534.7 0.6399999856948853 14732 5883 20609 HBL1_DMSO_200M_050219_1,20617 HBL1_DMSO_200M_050219_1,20617,IQLPDSVNQLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20618 100.68 800.0 173470.0 25 0 22183.0 + 29470 QLIKELPELL 10 151 598.3683576849476 1194.722162436695 2 598.3687011599541 MULTI CID FTMS 0 0 0 20609 141757.453125 1.0 0 0.0 9 Unmodified _QLIKELPELL_ ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 128.93241758739586 0.0002159076863698 3 [EP]{I|L}[K{I|L}]E{I|L}Q{I|L}{I|L} 10 4 + 63.668 0.0 0.0 5.3291 5.3291 73.731 0.0 0.0 0.0 0.211606782472451 13.521825181113629 0.211606782472451 0.211606782472451 0 0.8494850021680094 1.154901959985743 1.4802046884880935 0.5 [EP]{I|L}[K{I|L}]E{I|L}Q{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}Q{I|L}PE{I|L}{I|L};{I|L}{I|L}[SG]{I|L}Q{I|L}PE{I|L}{I|L};[VG][{I|L}T]{I|L}Q{I|L}PE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}PE{I|L}Q{I|L}{I|L};[EP]{I|L}[K{I|L}]E{I|L}[AG]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}[AG]{I|L}PE{I|L}{I|L};[K{I|L}]E{I|L}Q{I|L}PE{I|L}{I|L};[{I|L}A][VS]{I|L}Q{I|L}PE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}K[EP]{I|L}{I|L}Q{I|L}{I|L} 5.3291;5.3114;4.9914;4.7257;4.5673;4.5621;4.5443;4.4141;4.373;4.303 -;-;-;-;-;-;-;-;-;- 3275 1 1.725 105306.2 0.6200000047683716 14733 5883 20609 HBL1_DMSO_200M_050219_1,20618 HBL1_DMSO_200M_050219_1,20618,QLIKELPELL True True QLIKELPELL 100.68457 598.368701159954 1193096.0 20609.0 ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 5.592169602711995 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20619 100.69 380.0 247110.0 25 0 23374.0 24065 LYDHEAQHY 9 122 588.2619246796942 1174.5092964261885 2 588.2610961794853 MULTI CID FTMS 0 0 0 20609 130620.296875 1.0 0 0.0 10 Unmodified _LYDHEAQHY_ ENSG00000188994|ENST00000369577|ZNF292;nc|ENSG00000188994|O60281-2|ZNF292;ZNF292|p.D2051Tfs*9|1|0.79|ENSG00000188994|chr6:87259779-87259779|T/-|frameshift_variant 18.13498045792455 0.3457906370836843 3 [Y{I|L}]DSV 5 6 26.203 0.0 0.0 2.2309 0.0 0.0 0.0 594.2094666744882 594.2094666744882 8.616826064312377 0.0 0.0 0.0 0 0.0 2.0 0.6861818737241735 0.0 [Y{I|L}]DSV 2.2309 - 359 1 1.725 71890.2 1.0 14734 5883 20609 HBL1_DMSO_200M_050219_1,20619 HBL1_DMSO_200M_050219_1,20619,LYDHEAQHY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20620 100.71 800.0 169800.0 25 0 14346.0 1480 ALGDSEWFPQL 11 117 631.8061369710235 1261.597721008847 2 631.8061401247978 MULTI CID FTMS 0 0 0 20609 134517.421875 1.0 0 0.0 11 Unmodified _ALGDSEWFPQL_ ENSG00000133812|ENST00000256190|SBF2 22.736283301280096 0.5583477779825423 3 M{I|L}{I|L}Q{I|L} 5 8 42.008 0.0 0.0 3.3298 0.0 0.0 645.2362320959458 0.0 645.2362320959458 0.0 21.066147098514705 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 M{I|L}{I|L}Q{I|L} 3.3298 - 225 1 1.725 114814.7 0.6100000143051147 14735 5883 20609 HBL1_DMSO_200M_050219_1,20620 HBL1_DMSO_200M_050219_1,20620,ALGDSEWFPQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20621 100.72 655.0 182820.0 25 0 26922.0 + 16779 KGGGGGGF 8 135 318.65806364078986 635.3015743483797 2 318.6579467654228 MULTI CID FTMS 0 0 0 20609 126802.515625 1.0 0 0.0 12 Unmodified _KGGGGGGF_ REV__ENST00000428095.1_1_3:196098887-196159300:-|nuORF;REV__ENST00000493566.1_1_3:196127571-196159297:-|nuORF 0.0 0.8243325171867699 3 {I|L} 1 -1 8.8515 0.0 0.0 1.3933 0.0 0.0 392.0951362153704 127.09946619205311 519.1946024074235 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.3933 - 19 + 1 1.725 99849.8 1.0 14736 5883 20609 HBL1_DMSO_200M_050219_1,20621 HBL1_DMSO_200M_050219_1,20621,KGGGGGGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20622 100.73 416.0 205180.0 25 0 28780.0 + 20738 LLSLTFGLSI 10 127 532.3243501092517 1062.6341472853032 2 532.3248168826103 MULTI CID FTMS 0 0 0 20609 122749.6640625 0.6032240864596938 5 -0.2678985595703125 13 Unmodified _LLSLTFGLSI_ REV__ENSG00000123989|ENST00000243776|CHPF 32.30548876998284 0.2428506522065767 3 {[TV]|[{I|L}S]}{I|L}MV{I|L}{I|L} 7 -1 38.721 0.0 0.0 3.6439 0.0 0.0 0.0 290.1256902548324 290.1256902548324 18.43063563073472 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}MV{I|L}{I|L} 3.6439 - 968 1 1.725 71447.8 1.0 14737 5883 20609 HBL1_DMSO_200M_050219_1,20622 HBL1_DMSO_200M_050219_1,20622,LLSLTFGLSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20624 100.73 69.0 960980.0 25 0 60190.0 + 21341 LPFEVLQHI 9 79 548.3136608402074 1094.612768747215 2 548.3137695193291 MULTI CID FTMS 0 0 0 20623 685864.5 0.5555390071403093 1 -0.05267333984375 1 Unmodified _LPFEVLQHI_ ENSG00000118496|ENST00000237281|FBXO30 75.76082778847304 0.0188720312721366 3 {I|L}P{M(Oxidation (M))|F}EV{I|L}QH{I|L} 9 0 + 106.48 0.0 0.0 9.7278 9.7278 96.798 0.0 0.0 0.0 64.08616365146052 12.25268461881508 12.25268461881508 13.455612550363796 0 1.860924374808178 1.6989700043360187 0.7742275032520141 0.4247425010840047 + + {I|L}P{M(Oxidation (M))|F}EV{I|L}QH{I|L};{I|L}P{M(Oxidation (M))|F}EV{I|L}[AG]H{I|L};{I|L}P{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}QH{I|L};{I|L}P{I|L}{[DA]|[EG]}V{[MS]|[{M(Oxidation (M))|F}A]}H{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}VQH{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}EVQH{I|L}{I|L};{I|L}P{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}[AG]H{I|L};{I|L}P{I|L}{[DA]|[EG]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}H{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EVQH{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EV{I|L}QH{I|L}{I|L} 9.7278;8.4986;7.2375;6.2523;6.1362;6.022;6.0083;5.9564;5.9544;5.8403 +;-;-;-;-;-;-;-;-;- + 1092 + 1 1.725 58137.7 1.0 14738 5884 20623 HBL1_DMSO_200M_050219_1,20624 HBL1_DMSO_200M_050219_1,20624,LPFEVLQHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20625 100.74 800.0 238350.0 25 0 11426.0 + 10129 FPWPKVLKI 9 173 564.3527799952674 1126.691007057335 2 564.8547851443291 MULTI CID FTMS 0 0 0 20623 156448.984375 0.5770750092877358 1 -0.05267333984375 2 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 57.72198328787511 0.0273433238377839 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WPKV{I|L}K{I|L} 9 0 + 43.851 0.0 0.0 3.8921 3.8921 75.348 0.0 0.0 0.0 10.260244011120824 3.979400086720368 3.979400086720368 3.979400086720368 0 1.0189301784845295 2.0 0.0 0.2215141619232908 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WPKV{I|L}K{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WPKV{I|L}{I|L}K;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KWPV{I|L}K{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WPKVK{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KWPV{I|L}{I|L}K;[WP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K[KT]Q;[KP]V{I|L}WK[KT]Q;[KP]V{I|L}KW[KT]Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KWPVK{I|L}{I|L};[WP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F}PK{I|L} 3.8921;3.5389;3.3356;3.1126;2.9824;2.9814;2.6537;2.6537;2.5562;2.4821 +;-;-;-;-;-;-;-;-;- + 1837 + 1 1.725 146339.2 0.8600000143051147 14739 5884 20623 HBL1_DMSO_200M_050219_1,20625 HBL1_DMSO_200M_050219_1,20625,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20626 100.75 45.0 2366300.0 25 0 129960.0 + 17162 KLILLITQV 9 110 520.8573481133601 1039.70014329352 2 520.8578979372978 MULTI CID FTMS 0 0 0 20623 1258492.5 1.0 0 0.0 3 Unmodified _KLILLITQV_ ENSG00000163811|ENST00000407426|WDR43 51.629811660486645 0.0367964933207742 3 {I|L}{I|L}{I|L}K{I|L}{I|L}TQV 9 2 + 65.249 0.0 0.0 6.2757 6.2757 82.687 0.0 0.0 0.0 10.871280189675971 52.52726745349533 10.871280189675971 3.667053245199625 0 1.0189301784845295 0.8239087409443188 0.4247425010840047 0.0 {I|L}{I|L}{I|L}K{I|L}{I|L}TQV;{I|L}{I|L}{I|L}K{I|L}T{I|L}QV;{I|L}{I|L}K{I|L}{I|L}{I|L}TQV;{I|L}{I|L}{I|L}{I|L}K{I|L}TQV;{I|L}{I|L}{I|L}{I|L}KT{I|L}QV;{I|L}{I|L}K{I|L}{I|L}T{I|L}QV;{I|L}{I|L}{I|L}K{I|L}{I|L}T[AG]V;{I|L}{I|L}{I|L}K{I|L}T{I|L}[AG]V;{I|L}{I|L}{I|L}{I|L}K{I|L}T[AG]V;{I|L}{I|L}K{I|L}{I|L}{I|L}T[AG]V 6.2757;5.923;5.8168;5.8168;5.4641;5.4641;5.3901;5.0374;4.9312;4.9312 -;-;-;-;-;-;-;-;-;- 482 1 1.725 86226.2 1.0 14740 5884 20623 HBL1_DMSO_200M_050219_1,20626 HBL1_DMSO_200M_050219_1,20626,KLILLITQV True True KLILLITQV 100.745 520.857897937298 10035629.0 20623.0 ENSG00000163811|ENST00000407426|WDR43 4.076646486918132 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20627 100.75 120.0 727320.0 25 0 179200.0 + 40727 VLHYVYLL 8 104 510.3014963088324 1018.5884396844648 2 510.3017150759697 MULTI CID FTMS 0 0 0 20623 380412.6875 0.1503769576344643 -5 0.3303985595703125 4 Unmodified _VLHYVYLL_ REV__ENSG00000112282|ENST00000368068|MED23;REV__nc|ENSG00000112282|Q9ULK4-3|MED23;REV__nc|ENSG00000112282|Q9ULK4-4|MED23;REV__nc|ENSG00000112282|Q9ULK4-5|MED23 24.20995872069341 0.5349487244130675 3 T[MT]KPM{I|L}{I|L} 8 -1 36.718 0.0 0.0 3.6048 0.0 0.0 85.08988387275546 0.0 85.08988387275546 0.0 16.00976696845263 0.0 0.0 0 0.8182503180159344 0.0 0.6139829889124311 0.0 T[MT]KPM{I|L}{I|L} 3.6048 - 487 1 1.725 70606.4 1.0 14741 5884 20623 HBL1_DMSO_200M_050219_1,20627 HBL1_DMSO_200M_050219_1,20627,VLHYVYLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20628 100.75 159.0 593520.0 25 0 155180.0 + 30112 QVIQSLIAL 9 107 492.80834868453934 983.6021444358788 2 492.8083984255791 MULTI CID FTMS 0 0 0 20623 353616.96875 0.7463692000812873 -1 0.1067276000976562 5 Unmodified _QVIQSLIAL_ ENSG00000185651|ENST00000342192|UBE2L3;ENSG00000236444|ENST00000635918|UBE2L5;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 54.773552608820026 0.0299037012502309 3 [{I|L}A]GVS{I|L}S{I|L}[KP] 10 7 + 52.423 0.0 0.0 5.3297 5.3297 76.573 0.0 0.0 0.0 4.758950235313861 0.7918124604762511 0.7918124604762511 1.7731749024395782 0 0.0 1.3979400086720375 1.6382104921644451 0.0 [{I|L}A]GVS{I|L}S{I|L}[KP];[{I|L}A]GSV{I|L}S{I|L}[KP];[{I|L}A]GVTVS{I|L}[KP];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S{I|L}S{I|L}[KP];[{I|L}A]GS{I|L}VS{I|L}[KP];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TVS{I|L}[KP];{I|L}{I|L}NS{I|L}S{I|L}[KP];{[QV]|[N{I|L}]|[RA]|[KV]}TV{I|L}S{I|L}[KP];{I|L}{I|L}NTVS{I|L}[KP];{[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}VS{I|L}[KP] 5.3297;5.1494;4.973;4.8459;4.7927;4.4892;4.4512;4.3868;4.0945;4.0301 -;-;-;-;-;-;-;-;-;- 1459 1 1.725 75541.9 1.0 14742 5884 20623 HBL1_DMSO_200M_050219_1,20628 HBL1_DMSO_200M_050219_1,20628,QVIQSLIAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20629 100.76 257.0 452340.0 25 0 59565.0 1763 ALRPLIPAL 9 107 482.3210099138042 962.6274668944084 2 482.3214294314384 MULTI CID FTMS 0 0 0 20623 228290.75 0.584018077025621 1 -0.05267333984375 6 Unmodified _ALRPLIPAL_ ENST00000506004.5_1_5:141348908-141349118:+|nuORF 57.47134341890925 0.0274820932774257 3 [{I|L}A][RP]{I|L}{I|L}PA{I|L} 9 0 + 70.351 0.0 0.0 7.3082 7.3082 92.509 0.0 0.0 0.0 15.000000000000009 16.47817481888638 15.000000000000009 9.771212547196631 0 1.925833702434617 2.0 0.0 0.0 + + [{I|L}A][RP]{I|L}{I|L}PA{I|L};[{I|L}A][RP]{I|L}P{I|L}A{I|L};[PA][R{I|L}]{I|L}{I|L}PA{I|L};[PA][R{I|L}]{I|L}P{I|L}A{I|L};[HV]{I|L}{I|L}[KG]{I|L}A{I|L} 7.3082;6.2931;5.75;4.7349;0.84473 +;-;-;-;- + 384 1 1.725 90986.5 1.0 14743 5884 20623 HBL1_DMSO_200M_050219_1,20629 HBL1_DMSO_200M_050219_1,20629,ALRPLIPAL True True ALPRLLPAL 100.75536 482.321429431438 3037666.25 20623.0 nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENSG00000164818|ENST00000297440|DNAAF5 1.9016412099202475 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20630 100.76 255.0 445540.0 25 0 88387.0 + 40511 VIVDNLIQL 9 118 513.813668380208 1025.612783827216 2 513.8132202029228 MULTI CID FTMS 0 0 0 20623 232862.640625 0.7474151023978934 1 -0.05267333984375 7 Unmodified _VIVDNLIQL_ ENSG00000116221|ENST00000360840|MRPL37;ENST00000490670.1_1_1:54670749-54673061:+|nuORF 39.957323273325 0.0756908302845263 3 [{I|L}V]ND{I|L}VQ{I|L}{I|L} 9 4 + 71.393 0.0 0.0 6.961 6.961 80.172 0.0 0.0 0.0 7.047223332251093 16.478174818886373 7.047223332251093 0.8804562952784067 0 0.0 2.0 0.0 1.1549471895720984 [{I|L}V]ND{I|L}VQ{I|L}{I|L};[{I|L}V]QDVVQ{I|L}{I|L};[{I|L}V]NDV{I|L}Q{I|L}{I|L};[{I|L}V]NEVVQ{I|L}{I|L};[{I|L}V]ENVVQ{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DV{I|L}VQ{I|L}{I|L};[{I|L}V]QVDVQ{I|L}{I|L};[{I|L}V]ND{I|L}V[AG]{I|L}{I|L};[{I|L}V]QDVV[AG]{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DVV{I|L}Q{I|L}{I|L} 6.961;6.8751;6.5941;6.5816;6.5163;6.2738;6.155;6.0631;5.9773;5.9069 -;-;-;-;-;-;-;-;-;- 3636 1 1.725 91331.2 1.0 14744 5884 20623 HBL1_DMSO_200M_050219_1,20630 HBL1_DMSO_200M_050219_1,20630,VIVDNLIQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20631 100.76 211.0 335470.0 25 0 45813.0 + 11881 GLVEQLYDL 9 110 525.2804811611428 1048.5464093890855 2 525.2803832888603 MULTI CID FTMS 0 0 0 20623 225722.328125 0.6824348052672966 1 -0.05267333984375 8 Unmodified _GLVEQLYDL_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000452600.1_1_2:130987586-130988813:+|nuORF;ENST00000477976.5_1_1:880076-889593:-|nuORF 52.268347100219714 0.0353964759249114 3 {NN|[MP]|[D{I|L}]|[EV]}Q{I|L}G{I|L} 6 4 39.74 0.0 0.0 3.79 0.0 0.0 0.0 406.1641211412918 406.1641211412918 17.744783912394276 0.0 0.0 0.0 0 0.75 1.5228787452803376 0.0 0.2396518287104437 {NN|[MP]|[D{I|L}]|[EV]}Q{I|L}G{I|L} 3.79 - 681 1 1.725 61459.1 1.0 14745 5884 20623 HBL1_DMSO_200M_050219_1,20631 HBL1_DMSO_200M_050219_1,20631,GLVEQLYDL True True GLVEQLYDL 100.76411 525.28038328886 2342986.25 20623.0 ENSG00000188976|ENST00000327044|NOC2L;;ENST00000452600.1_1_2:130987586-130988813:+|nuORF;;ENST00000477976.5_1_1:880076-889593:-|nuORF 2.964757978916168 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20632 100.78 800.0 152370.0 25 0 26096.0 + + 11168 DALALIRL 8 121 442.78151621425866 883.5484794953173 2 442.7818481326103 MULTI CID FTMS 0 0 0 20623 124422.2265625 1.0 0 0.0 9 Unmodified _GELLAIRL_ ENSG00000115946|ENST00000263657|PNO1 48.345845343767074 0.1470278396477103 3 {[DA]|[EG]}{I|L}A{I|L}{I|L}R{I|L} 8 -1 + 76.592 0.0 0.0 8.6686 8.6686 89.287 0.0 0.0 0.0 46.65282857807391 12.5190243216651 12.5190243216651 4.757724967479859 0 1.3494850021680094 2.0 0.0 0.2742275032520141 {[DA]|[EG]}{I|L}A{I|L}{I|L}R{I|L};{[DA]|[EG]}{I|L}{I|L}A{I|L}R{I|L};{[DA]|[EG]}{I|L}A{I|L}R{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}AR{I|L}{I|L} 8.6686;8.1302;7.619;7.0805 -;+;-;- + 261 + 1 1.725 99846.8 0.449999988079071 14746 5884 20623 HBL1_DMSO_200M_050219_1,20632 HBL1_DMSO_200M_050219_1,20632,GELLAIRL False False DALALIRL 100.77792 442.78184813261 816603.9375 20623.0 ENSG00000115946|ENST00000263657|PNO1 2.038109997908274 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20634 100.78 20.0 3947300.0 25 0 581190.0 + 32514 SALPDIKVLTL 11 77 585.3607569749753 1168.7069610167505 2 585.3610717654228 MULTI CID FTMS 0 0 0 20633 2933102.5 0.9244363514878556 1 -0.03179931640625 1 Unmodified _SALPDIKVLTL_ ENSG00000115241|ENST00000344034|PPM1G;ENST00000472077.1_1_2:27604468-27607956:-|nuORF 42.312485326615175 0.1767732348921932 3 [DP]{I|L}KV{I|L}TG 8 4 63.849 0.0 0.0 5.4633 0.0 0.0 0.0 342.20431144083176 342.20431144083176 34.64123782136497 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.1989700043360187 0.0 [DP]{I|L}KV{I|L}TG 5.4633 - 199 1 1.725 67728.5 1.0 14747 5885 20633 HBL1_DMSO_200M_050219_1,20634 HBL1_DMSO_200M_050219_1,20634,SALPDIKVLTL False True SALPDIKVLTL 100.78259 585.361071765423 78784236.0 20633.0 ENST00000472077.1_1_2:27604468-27607956:-|nuORF;;ENSG00000115241|ENST00000344034|PPM1G 6.018042087554932 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20635 100.79 238.0 604370.0 25 0 137130.0 + 10121 FPWPKVLKI 9 107 376.570766370445 1126.6904697115351 3 376.5706054568291 MULTI CID FTMS 0 0 0 20633 377908.21875 0.8418268319784212 -3 0.2530670166015625 2 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 41.95555342248728 0.0647214845423414 3 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 49.581 0.0 0.0 4.4006 4.4006 71.703 0.0 0.0 0.0 11.695925227640975 0.7918124604762511 0.7918124604762511 0.7918124604762511 0 0.2742275032520141 0.0 0.0 0.6307196863200843 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K 4.4006;4.3303 +;- + 370 + 1 1.725 120055.4 1.0 14748 5885 20633 HBL1_DMSO_200M_050219_1,20635 HBL1_DMSO_200M_050219_1,20635,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20636 100.79 235.0 480470.0 25 0 89560.0 + 25105 MPYNYPVLL 9 127 555.2890545850029 1108.5635562368057 2 555.2890502810478 MULTI CID FTMS 0 0 0 20633 235303.6875 0.4079989206317555 2 -0.0871200561523437 3 Unmodified _MPYNYPVLL_ ENSG00000102786|ENST00000311234|INTS6;ENSG00000165359|ENST00000639893|INTS6L;nc|ENSG00000102786|Q9UL03-3|INTS6;nc|ENSG00000165359|Q5JSJ4|INTS6L 53.57557251787612 0.0325303259649373 3 [{I|L}T]C(Carbamidomethyl (C))YMPV{I|L}{I|L} 9 5 + 64.019 0.0 0.0 5.775 5.775 79.975 0.0 0.0 0.0 5.311795437063331 10.330145895351848 5.311795437063331 3.0102999566398125 0 0.8182503180159344 2.0 0.3494850021680094 0.0 [{I|L}T]C(Carbamidomethyl (C))YMPV{I|L}{I|L};[{I|L}T]C(Carbamidomethyl (C))MYPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NMYPV{I|L}{I|L};[{I|L}T][CG]YMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MNYPV{I|L}{I|L};[{I|L}T][CG]MYPV{I|L}{I|L};[YN]PYMPV{I|L}{I|L};[{I|L}T]C(Carbamidomethyl (C))Y[VP]M{I|L}{I|L};[YN]PMYPV{I|L}{I|L} 5.775;5.5034;5.2958;5.1319;4.9443;4.7015;4.6728;4.5438;4.5139;4.3798 -;-;-;-;-;-;-;-;-;- 1445 1 1.725 92755.5 1.0 14749 5885 20633 HBL1_DMSO_200M_050219_1,20636 HBL1_DMSO_200M_050219_1,20636,MPYNYPVLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20637 100.8 236.0 310360.0 25 0 33980.0 + 25608 NFPEHIFPAL 10 97 592.8085477936168 1183.6025426540334 2 592.8083984255791 MULTI CID FTMS 0 0 0 20633 204068.828125 0.0187036790399266 -10 0.6526107788085938 4 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 34.221707139014875 0.2185845369562963 3 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 8 8 49.232 0.0 0.0 4.1595 0.0 0.0 0.0 126.03533350162344 126.03533350162344 30.881681563112405 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3252574989159953 0.4247425010840047 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 4.1595 - 577 + 1 1.725 59282.1 1.0 14750 5885 20633 HBL1_DMSO_200M_050219_1,20637 HBL1_DMSO_200M_050219_1,20637,NFPEHIFPAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20638 100.81 800.0 169970.0 25 0 38386.0 + 42264 VSPISLLAP 9 119 896.5448946911256 895.5376182245255 1 896.5441772341728 MULTI CID FTMS 0 0 0 20633 93512.125 1.0 0 0.0 5 Unmodified _VSPISLLAP_ REV__ENST00000527418.5_1_1:155025082-155034975:+|nuORF 28.486842064014134 0.1687311288560894 3 {I|L}W[HS]{I|L}[K{I|L}] 7 -1 + 42.223 0.0 0.0 4.7148 4.7148 84.217 0.0 0.0 0.0 27.19927090766429 6.777807052660805 6.777807052660805 9.528937514676484 0 1.424742501084005 0.0 0.5 0.0 {I|L}W[HS]{I|L}[K{I|L}];{I|L}W{I|L}[HS][K{I|L}];{I|L}G{I|L}[HC]{I|L}[K{I|L}];{I|L}S{I|L}V[HS][K{I|L}];{I|L}S{I|L}[WH][K{I|L}];{I|L}W{I|L}[PS]{I|L}[PA];{[TV]|[{I|L}S]}V[PS]VPVV;{I|L}W{I|L}{[TV]|[{I|L}S]}P[PA];[{I|L}P]{I|L}{I|L}{I|L}Q{[CP]|[EA]};{I|L}S{I|L}V[PS]{I|L}[PA] 4.7148;3.6508;2.6606;2.5062;2.2961;1.4368;1.3665;1.3035;1.2819;1.1643 -;-;-;-;-;-;-;-;-;- 853 + 1 1.725 93395.9 0.5899999737739563 14751 5885 20633 HBL1_DMSO_200M_050219_1,20638 HBL1_DMSO_200M_050219_1,20638,VSPISLLAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20640 100.81 49.0 1967600.0 25 0 398330.0 + 1309 AIVDLIHDI 9 82 504.78979529645216 1007.5650376597044 2 504.7900878787041 MULTI CID FTMS 0 0 0 20639 1205507.25 0.1951317787146097 3 -0.1594924926757812 1 Unmodified _AIVDLIHDI_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 57.47134341890925 0.0274820932774257 3 [{I|L}A]VD{I|L}{I|L}HD{I|L} 9 0 + 74.148 0.0 0.0 7.3592 7.3592 88.172 0.0 0.0 0.0 27.147642715192504 5.753800256993955 5.753800256993955 5.753800256993955 0 0.4247425010840047 2.0 1.1307196863200843 0.0 + + [{I|L}A]VD{I|L}{I|L}HD{I|L};[{I|L}A]VD{I|L}{I|L}{I|L}[HD];[{I|L}A]VD{I|L}[NP][PG]{I|L};[{I|L}A]VD{I|L}[NP]V[PA];[{I|L}A]VHH[YR]{I|L};[{I|L}A]HHV[YR]{I|L};[{I|L}A]HHH{I|L}{I|L}[PA] 7.3592;6.7881;3.7608;3.71;2.8645;2.391;1.5449 +;-;-;-;-;-;- + 435 + 1 1.725 74840.8 1.0 14752 5886 20639 HBL1_DMSO_200M_050219_1,20640 HBL1_DMSO_200M_050219_1,20640,AIVDLIHDI True True AIVDLIHDI 100.81439 504.790087878704 151555440.0 20639.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENSG00000132182|ENST00000254508|NUP210 3.199253797531128 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20641 100.82 110.0 747040.0 25 0 81296.0 + 37696 TLPDLVPQL 9 85 498.2923468470252 994.5701407608504 2 498.2924682497978 MULTI CID FTMS 0 0 0 20639 482539.78125 0.4216049077318368 3 -0.1594924926757812 2 Unmodified _TLPDLVPQL_ ENSG00000163811|ENST00000407426|WDR43 36.04419817259434 0.0971720506436186 3 [{I|L}T]Q 3 6 28.103 0.0 0.0 2.8256 0.0 0.0 0.0 649.3556381575878 649.3556381575878 4.725665361961546 0.0 0.0 0.0 0 0.0 2.0 0.2059771852360797 0.4247425010840047 [{I|L}T]Q 2.8256 - 257 1 1.725 67296.3 1.0 14753 5886 20639 HBL1_DMSO_200M_050219_1,20641 HBL1_DMSO_200M_050219_1,20641,TLPDLVPQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20642 100.82 170.0 584510.0 25 0 57974.0 + 34734 SPYPWPLNHI 10 94 612.3146212862029 0 612.3144409060478 PEAK CID FTMS 0 0 0 20639 326559.59375 0.4383981736295404 12 -1.1233673095703125 3 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 71.92227651296345 0.0057842883215393 3 YPWP{I|L}N 6 4 43.853 0.0 0.0 3.5868 0.0 0.0 184.0904719651806 265.1305025690063 449.2209745341869 0.0 0.0 0.0 0.0 0 1.16944517631652 0.0 0.0 1.0387254899964358 + YPWP{I|L}N 3.5868 + + 282 + 1 1.725 78353.0 1.0 14754 5886 20639 HBL1_DMSO_200M_050219_1,20642 HBL1_DMSO_200M_050219_1,20642,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20643 100.83 800.0 464660.0 25 0 31151.0 + 156 AALPVVISI 9 210 882.566505553327 881.559229086727 1 882.5689575076103 MULTI CID FTMS 0 0 0 20639 192196.5 0.690550046197319 -2 0.08447265625 4 Unmodified _AALPVVISI_ ENSG00000124574|ENST00000372530|ABCC10;ENST00000443426.2_1_6:43395621-43402667:+|nuORF;nc|ENSG00000124574|Q5T3U5-2|ABCC10 53.57557251787612 0.0325303259649373 3 [VP]V{I|L}RVS{I|L} 8 5 + 62.063 0.0 0.0 7.0401 7.0401 83.865 0.0 0.0 0.0 13.32147814545337 16.40978057358332 13.32147814545337 3.0102999566398125 0 0.2742275032520141 1.3979400086720375 0.3252574989159953 0.3494850021680094 [VP]V{I|L}RVS{I|L};[VP]{I|L}VRVS{I|L};[VP]V{I|L}A{I|L}AS{I|L};[VP]VRSV{I|L}{I|L};[VP]AT{I|L}R{I|L}{I|L};[VP]VR{I|L}VS{I|L};[VP]{I|L}QTV{I|L}{I|L};[VP]{I|L}{I|L}{I|L}QS{I|L};[VP]V{I|L}SRV{I|L};[VP]V{I|L}SVR{I|L} 7.0401;6.6986;6.6956;6.6117;6.5219;6.4989;6.47;6.4152;6.4014;6.4014 -;-;-;-;-;-;-;-;-;- 5067 1 1.725 239713.5 0.7200000286102295 14755 5886 20639 HBL1_DMSO_200M_050219_1,20643 HBL1_DMSO_200M_050219_1,20643,AALPVVISI True True AALPVVISI 100.83389 882.56895750761 2575674.25 20639.0 ENST00000443426.2_1_6:43395621-43402667:+|nuORF;;nc|ENSG00000124574|Q5T3U5-2|ABCC10;;ENSG00000124574|ENST00000372530|ABCC10 4.336318333943685 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20644 100.84 384.0 388930.0 25 0 33960.0 + -1 LWCIIFAL 8 138 518.2862069990716 1034.5578610649432 2 518.2862426638603 MULTI CID FTMS 0 0 0 20639 175833.859375 0.2310612537718446 3 -0.1594924926757812 5 Carbamidomethyl (C) _LWC(Carbamidomethyl (C))IIFAL_ REV__ENSG00000102539|ENST00000218721|MLNR;REV__ENSG00000180772|ENST00000371906|AGTR2 24.20995872069341 0.5349487244130675 3 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]GM{M(Oxidation (M))|F}A{I|L} 9 -1 + 55.797 0.0 0.0 5.3933 5.3933 83.525 0.0 0.0 0.0 6.14393726401687 28.34991425165589 6.14393726401687 7.147642715192504 0 1.16944517631652 0.8239087409443188 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]GM{M(Oxidation (M))|F}A{I|L};[{I|L}A]G[KQ]GM{M(Oxidation (M))|F}A{I|L};[Q{I|L}][KQ]GM{M(Oxidation (M))|F}A{I|L};{[VA]|[{I|L}G]}A[KQ]GM{M(Oxidation (M))|F}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]G[WY]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[YR]{[RE]|[WV]}A{I|L};[{I|L}A]G[KQ]G[WY]{I|L};[{I|L}T][W{M(Oxidation (M))|F}]{[RE]|[WV]}A{I|L};[Q{I|L}][KQ]G[WY]{I|L};{[VA]|[{I|L}G]}A[KQ]G[WY]{I|L} 5.3933;4.7024;4.306;4.1265;2.4833;2.2145;1.7872;1.5831;1.396;1.2113 -;-;-;-;-;-;-;-;-;- 370 1 1.725 114772.5 1.0 14756 5886 20639 HBL1_DMSO_200M_050219_1,20644 HBL1_DMSO_200M_050219_1,20644,LWCIIFAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20645 100.85 591.0 258370.0 25 0 29688.0 + + 3237 FIPYLVVKV 9 167 539.2405706935616 1076.4665884539231 2 539.2414428591728 MULTI CID FTMS 0 0 0 20639 144692.71875 0.1691726331665782 3 -0.1594924926757812 6 Unmodified _AYASYSSETV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5 32.30548876998284 0.2428506522065767 3 [{I|L}A]{M(Oxidation (M))|F}GT{M(Oxidation (M))|F}S 7 -1 59.539 0.0 0.0 5.5309 0.0 0.0 0.0 350.08547926336075 350.08547926336075 34.13257898857481 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.055462187404089 0.0 [{I|L}A]{M(Oxidation (M))|F}GT{M(Oxidation (M))|F}S 5.5309 - 1233 + 1 1.725 118699.1 1.0 14757 5886 20639 HBL1_DMSO_200M_050219_1,20645 HBL1_DMSO_200M_050219_1,20645,AYASYSSETV False False FIPYLVVKV 100.85114 539.241442859173 2152127.5 20639.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 0.7548285722732544 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20646 100.86 800.0 135500.0 25 0 21543.0 3498 CLGSSAAK 8 113 736.3658387914213 735.3585623248213 1 736.3658935427666 MULTI CID FTMS 0 0 0 20639 91258.3125 0.5061151600005789 3 -0.1594924926757812 7 Unmodified _CLGSSAAK_ nc|ENSG00000168658|Q502W6-6|VWA3B 13.50788311687929 0.7113601687236069 3 {[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}SP{M(Oxidation (M))|F} 6 5 + 49.645 0.0 0.0 6.7511 6.7511 86.151 0.0 0.0 0.0 1.5752217873205154 1.5752217873205154 1.5752217873205154 5.31743128760553 0 1.4489700043360187 0.9208187539523752 1.2302046884880935 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}SP{M(Oxidation (M))|F};{[TV]|[{I|L}S]}WSP{M(Oxidation (M))|F};{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{I|L}P{M(Oxidation (M))|F};{[TV]|[{I|L}S]}C(Carbamidomethyl (C)){I|L}P{M(Oxidation (M))|F};{[TV]|[{I|L}S]}SWP{M(Oxidation (M))|F};{[VA]|[{I|L}G]}C{I|L}SP{M(Oxidation (M))|F};[YV]PNP{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[CG]{I|L}P{M(Oxidation (M))|F};{[VA]|[{I|L}G]}CS{I|L}P{M(Oxidation (M))|F};{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}M{[TV]|[{I|L}S]} 6.7511;6.028;5.5785;4.8554;4.44;3.9654;3.9507;3.5744;3.3704;3.2981 -;-;-;-;-;-;-;-;-;- 331 1 1.725 84367.6 0.4699999988079071 14758 5886 20639 HBL1_DMSO_200M_050219_1,20646 HBL1_DMSO_200M_050219_1,20646,CLGSSAAK False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 20648 100.87 212.0 496870.0 25 0 101010.0 + 15241 IPFVAPPLV 9 80 476.7971811594156 951.5798093856312 2 476.7969848513603 MULTI CID FTMS 0 0 0 20647 220204.609375 0.4454556184050539 4 -0.25390625 1 Unmodified _IPFVAPPLV_ ENSG00000159596|ENST00000372025|TMEM69 56.04830969593885 0.0282699710924866 3 [{I|L}P]{M(Oxidation (M))|F}G{I|L}PPV{I|L} 9 4 + 56.766 0.0 0.0 5.9655 5.9655 83.522 0.0 0.0 0.0 5.118833609788752 7.632192780232785 5.118833609788752 5.118833609788752 0 0.8684151806525389 1.5228787452803376 0.0 0.0 [{I|L}P]{M(Oxidation (M))|F}G{I|L}PPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VA{I|L}PPV{I|L};[{I|L}P]{M(Oxidation (M))|F}VAPPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}G{I|L}PPV{I|L};[{I|L}P]{M(Oxidation (M))|F}GP{I|L}PV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}APPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VAP{I|L}PV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VAPPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}GP{I|L}PV{I|L};[{I|L}P]PA[{M(Oxidation (M))|F}V]PV{I|L} 5.9655;5.4275;5.2309;5.0983;4.9327;4.693;4.3948;4.3637;4.0655;3.4099 -;-;-;-;-;-;-;-;-;- 374 1 1.742 84764.4 1.0 14759 5887 20647 HBL1_DMSO_200M_050219_1,20648 HBL1_DMSO_200M_050219_1,20648,IPFVAPPLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20649 100.88 356.0 332800.0 25 0 62408.0 + 1529 ALITRIFGV 9 123 495.3112217665337 988.6078905998676 2 495.3109008669853 MULTI CID FTMS 0 0 0 20647 140468.4375 0.2517177605391016 4 -0.25390625 2 Unmodified _ALITRIFGV_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;ENST00000436947.1_1_2:43711555-43732871:-|nuORF;nc|ENSG00000115970|Q6YHU6-3|THADA 49.55428908609986 0.0413471690215031 3 [{I|L}A]{I|L}TR{I|L}{M(Oxidation (M))|F}GV 9 0 + 70.837 0.0 0.0 7.1654 7.1654 93.281 0.0 0.0 0.0 36.45939869386305 15.674100046527355 15.674100046527355 14.216590673155736 0 2.017220322351953 2.0 0.0 0.3252574989159953 + + [{I|L}A]{I|L}TR{I|L}{M(Oxidation (M))|F}GV;[{I|L}A]{I|L}[R{I|L}]T{M(Oxidation (M))|F}GV;[{I|L}A]H{I|L}A{I|L}RPV;[{I|L}A]{I|L}HA{I|L}RPV;[{I|L}A]{I|L}[VP]{I|L}NH{I|L};[{I|L}A]V[{I|L}P]{I|L}NH{I|L};[{I|L}T]R{I|L}A{I|L}{M(Oxidation (M))|F}GV;[{I|L}A]{I|L}[VP]{I|L}GGH{I|L};[{I|L}A]V[{I|L}P]{I|L}GGH{I|L};[{I|L}A]{I|L}[R{I|L}][PG]H{I|L} 7.1654;5.7273;5.4527;5.2514;4.8907;4.2817;4.0535;3.9593;3.3503;3.2185 +;-;-;-;-;-;-;-;-;- + 1098 + 1 1.742 94704.7 1.0 14760 5887 20647 HBL1_DMSO_200M_050219_1,20649 HBL1_DMSO_200M_050219_1,20649,ALITRIFGV True True ALITRIFGV 100.87924 495.310900866985 7377472.0 20647.0 ENSG00000115970|ENST00000405975|THADA;;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;;ENST00000436947.1_1_2:43711555-43732871:-|nuORF;;nc|ENSG00000115970|Q6YHU6-3|THADA 5.282705307006836 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20650 100.89 403.0 464700.0 25 0 45257.0 + 25946 NLPDEEIFQQL 11 144 673.3352424362749 1344.6559319393498 2 673.3358642458916 MULTI CID FTMS 0 0 0 20647 235275.078125 0.0781127637591425 -5 0.3401870727539062 3 Unmodified _NLPDEEIFQQL_ ENSG00000169019|ENST00000381571|COMMD8 132.37960578797484 0.0500505301871771 3 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F}Q[Q{I|L}] 11 4 + 75.122 0.0 0.0 5.5867 5.5867 84.861 0.0 0.0 0.0 8.143634230380883 4.981979378655879 4.981979378655879 8.143634230380883 0 0.8737125054200234 0.638272163982407 1.3411290632962718 1.1421590589602533 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F}Q[Q{I|L}];[HT]CE{I|L}N{I|L}{M(Oxidation (M))|F}Q[Q{I|L}];[DP]EE{I|L}N{I|L}{M(Oxidation (M))|F}[AG][Q{I|L}];[DP]EE{I|L}{M(Oxidation (M))|F}QQV[Q{I|L}];[DP]EE{I|L}{M(Oxidation (M))|F}QVQ[Q{I|L}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PE{I|L}N{I|L}{M(Oxidation (M))|F}Q[Q{I|L}];[EP]DE{I|L}N{I|L}{M(Oxidation (M))|F}Q[Q{I|L}];[DP]EE{I|L}{M(Oxidation (M))|F}QQN{I|L}{I|L};[DP]EE{M(Oxidation (M))|F}{I|L}QQV[Q{I|L}];[DP]EE{M(Oxidation (M))|F}{I|L}QVQ[Q{I|L}] 5.5867;4.9811;4.9078;4.8515;4.8368;4.8003;4.744;4.7226;4.3677;4.353 -;-;-;-;-;-;-;-;-;- 11763 1 1.742 140891.2 1.0 14761 5887 20647 HBL1_DMSO_200M_050219_1,20650 HBL1_DMSO_200M_050219_1,20650,NLPDEEIFQQL True True NLPDEEIFQQL 100.88646 673.335864245892 132690728.0 20647.0 ENSG00000169019|ENST00000381571|COMMD8 5.157461325327556 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20652 100.89 41.0 1511400.0 25 0 150980.0 + 39166 TYPEFLANAL 10 106 569.7923723696688 1137.5701918061377 2 569.7926513552666 MULTI CID FTMS 0 0 0 20651 1156628.125 0.6023816568673309 5 -0.4604034423828125 1 Unmodified _TYPEFLANAL_ ENSG00000064703|ENST00000369702|DDX20;ENST00000475700.1_1_1:112303127-112303484:+|nuORF 24.020572477871973 0.4289996903560794 3 [YT][RH]NA 6 6 40.207 0.0 0.0 3.5345 0.0 0.0 0.0 392.1836310974063 392.1836310974063 15.267473519662246 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.805462187404089 [YT][RH]NA 3.5345 - 866 1 1.742 52354.5 1.0 14762 5888 20651 HBL1_DMSO_200M_050219_1,20652 HBL1_DMSO_200M_050219_1,20652,TYPEFLANAL False True TYPEFLANAL 100.8911 569.792651355267 15755892.0 20651.0 ENST00000475700.1_1_1:112303127-112303484:+|nuORF;;ENSG00000064703|ENST00000369702|DDX20 4.3958916664123535 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20653 100.89 144.0 726040.0 25 0 94751.0 + 1817 ALTELLAKI 9 102 486.3103788438592 970.6062047545184 2 486.3105651736259 MULTI CID FTMS 0 0 0 20651 526516.625 0.0154662355860117 21 -2.082923889160156 2 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 71.92227651296345 0.0203558744033348 3 [{I|L}A]TE{I|L}K{I|L}{I|L}A 9 4 + 69.649 0.0 0.0 7.1758 7.1758 94.147 0.0 0.0 0.0 10.399240633160233 30.410386596522017 10.399240633160233 20.452738656163746 0 2.0 2.0 1.110924374808178 0.0 [{I|L}A]TE{I|L}K{I|L}{I|L}A;[{I|L}A]{I|L}ETK{I|L}{I|L}A;{[QN]|[E{I|L}]|[KN]}TA{I|L}K{I|L}{I|L}A;{[ET]|[MV]}{I|L}A{I|L}K{I|L}{I|L}A;{[QN]|[E{I|L}]|[KN]}T{I|L}AK{I|L}{I|L}A;{[ET]|[MV]}{I|L}{I|L}AK{I|L}{I|L}A;[{I|L}T]AE{I|L}K{I|L}{I|L}A;[{I|L}T]EA{I|L}K{I|L}{I|L}A;{[QN]|[E{I|L}]|[KN]}{I|L}TAK{I|L}{I|L}A;{I|L}{I|L}ETAK{I|L}{I|L}A 7.1758;5.0686;4.9851;4.5561;4.506;4.0771;4.0396;4.0364;3.6667;3.5798 -;-;-;-;-;-;-;-;-;- 1065 1 1.742 82082.0 1.0 14763 5888 20651 HBL1_DMSO_200M_050219_1,20653 HBL1_DMSO_200M_050219_1,20653,ALTELLAKI True True ALTELLAKI 100.89398 486.310565173626 1488290304.0 20651.0 ENST00000536795.1_1_12:4387934-4398180:+|nuORF;;ENSG00000118971|ENST00000261254|CCND2 6.498978614807129 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20654 100.9 132.0 500530.0 25 0 42500.0 + 43374 WQDWPLTQV 9 116 586.7904900496585 1171.566427166117 2 586.7902709841728 MULTI CID FTMS 0 0 0 20651 317795.84375 0.7350803574571595 -1 0.0213775634765625 3 Unmodified _WQDWPLTQV_ chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 60.07390631473393 0.0260411565414776 3 [WQ]DWP 5 4 30.947 0.0 0.0 2.6415 0.0 0.0 0.0 456.24633374254194 456.24633374254194 11.754851073279813 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.9876954943324544 + [WQ]DWP 2.6415 + + 396 1 1.742 56064.1 1.0 14764 5888 20651 HBL1_DMSO_200M_050219_1,20654 HBL1_DMSO_200M_050219_1,20654,WQDWPLTQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20655 100.9 108.0 702650.0 25 0 61273.0 + 27797 PLPPPWLPQ 9 103 522.7979655352746 1043.581378137349 2 522.8005248904228 MULTI CID FTMS 0 0 0 20651 264920.875 0.0773091347669414 -6 0.3615646362304687 4 Unmodified _PLPPPWLPQ_ REV__ENST00000356654.8_1_12:7050946-7051303:+|nuORF 20.871210003555333 0.2717241269066626 3 [{I|L}P]PPPPQW{I|L} 9 -1 + 27.942 0.0 0.0 2.6775 2.6775 78.729 0.0 0.0 0.0 7.694182131708306 4.704999916446798 4.704999916446798 9.208187539523752 0 0.6549471895720985 1.0 0.0 0.0 [{I|L}P]PPPPQW{I|L};[{I|L}P]PPPP[AG]W{I|L};[{I|L}P][YK]PQW{I|L};[{I|L}P]P[YK]QW{I|L};[{I|L}P][YK]P[AG]W{I|L} 2.6775;1.7951;1.5066;0.83686;0.61911 -;-;-;-;- 310 1 1.742 62873.0 1.0 14765 5888 20651 HBL1_DMSO_200M_050219_1,20655 HBL1_DMSO_200M_050219_1,20655,PLPPPWLPQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20656 100.9 277.0 436190.0 25 0 64180.0 + 10224 FQLEHIMDL 9 127 573.2863622217212 1144.5581715102423 2 573.2867919802666 MULTI CID FTMS 0 0 0 20651 222723.046875 0.4914296244224848 -1 0.0213775634765625 5 Unmodified _FQLEHIMDL_ ENSG00000197102|ENST00000360184|DYNC1H1 51.41523569358685 0.0372669606867193 3 [H{I|L}]EQ{M(Oxidation (M))|F}{I|L}MD{I|L} 9 4 + 57.348 0.0 0.0 5.0105 5.0105 76.294 0.0 0.0 0.0 2.5134875797167666 14.973024840566469 2.5134875797167666 2.3860585694618663 0 0.4247425010840047 1.2218487496163564 0.3252574989159953 0.3807196863200844 [H{I|L}]EQ{M(Oxidation (M))|F}{I|L}MD{I|L};[H{I|L}]EQ{M(Oxidation (M))|F}P{M(Oxidation (M))|F}D{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EH{I|L}MD{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EHP{M(Oxidation (M))|F}D{I|L};[H{I|L}]E{I|L}MQ{M(Oxidation (M))|F}D{I|L};{[QN]|[E{I|L}]|[KN]}HQ{M(Oxidation (M))|F}{I|L}MD{I|L};[H{I|L}]E{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}MD{I|L};{[YC]|[HE]}{I|L}Q{M(Oxidation (M))|F}{I|L}MD{I|L};[H{I|L}]E[AG]{M(Oxidation (M))|F}{I|L}MD{I|L};{[QN]|[E{I|L}]|[KN]}HQ{M(Oxidation (M))|F}P{M(Oxidation (M))|F}D{I|L} 5.0105;4.802;4.7909;4.5824;4.5541;3.9506;3.9133;3.9045;3.8734;3.7422 -;-;+;-;-;-;-;-;-;- + 1579 1 1.742 93294.4 1.0 14766 5888 20651 HBL1_DMSO_200M_050219_1,20656 HBL1_DMSO_200M_050219_1,20656,FQLEHIMDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20657 100.91 437.0 448360.0 25 0 39433.0 + 36515 TAFPFQVEV 9 115 1037.5317218572409 1036.5244453906407 1 1037.533740222454 MULTI CID FTMS 0 0 0 20651 190715.25 0.4960474783776877 -2 0.0766983032226562 6 Unmodified _TAFPFQVEV_ ENSG00000101596|ENST00000320876|SMCHD1;ENST00000584897.5_1_18:2726458-2784452:+|nuORF;ENST00000609587.1_1_18:2728435-2728615:+|nuORF;nc|ENSG00000101596|A6NHR9-2|SMCHD1 149.91393105778798 0.0244608884021643 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QVTA{M(Oxidation (M))|F}EV 9 6 + 86.384 0.0 0.0 8.334 8.334 85.363 0.0 0.0 0.0 6.060085581237715 7.6905270526793 6.060085581237715 2.245214458955317 0 0.2742275032520141 1.5228787452803376 1.3441876774005248 1.0356668758921828 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QVTA{M(Oxidation (M))|F}EV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QV{M(Oxidation (M))|F}ATEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QV[YG]VEV;[TA]{M(Oxidation (M))|F}PQ{M(Oxidation (M))|F}VEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[TA]{M(Oxidation (M))|F}VEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QV{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[PG];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QV{M(Oxidation (M))|F}V{[DS]|[MA]|[CV]|TT}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QVTAE{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TA]Q{M(Oxidation (M))|F}VEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}VATEV 8.334;8.1174;7.7539;7.7493;7.7377;7.592;7.5194;7.5187;7.4354;7.3624 -;-;-;-;-;-;-;-;-;- 8876 1 1.742 126892.4 1.0 14767 5888 20651 HBL1_DMSO_200M_050219_1,20657 HBL1_DMSO_200M_050219_1,20657,TAFPFQVEV True True TAFPFQVEV 100.9119 1037.53374022245 4069438.0 20651.0 ENST00000609587.1_1_18:2728435-2728615:+|nuORF;;ENSG00000101596|ENST00000320876|SMCHD1;;nc|ENSG00000101596|A6NHR9-2|SMCHD1;;ENST00000584897.5_1_18:2726458-2784452:+|nuORF 6.932419935862224 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20658 100.93 800.0 206430.0 25 0 23471.0 + 15629 IQHDLIFSL 9 153 543.3034173366019 1084.5922817400035 2 543.3029662966728 MULTI CID FTMS 0 0 0 20651 117748.8359375 0.7119531848363432 -1 0.0213775634765625 7 Unmodified _IQHDLIFSL_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 78.7280429016045 0.0178249292250809 3 ES{I|L}{I|L}Q{M(Oxidation (M))|F}S{I|L} 8 5 84.464 0.0 0.0 7.7876 0.0 0.0 149.10346445660372 0.0 149.10346445660372 0.0 59.49109257471335 0.0 0.0 0 1.064909327626439 0.0 1.8160364270168807 0.6549471895720984 ES{I|L}{I|L}Q{M(Oxidation (M))|F}S{I|L} 7.7876 - 3630 + 1 1.742 128123.9 0.5 14768 5888 20651 HBL1_DMSO_200M_050219_1,20658 HBL1_DMSO_200M_050219_1,20658,IQHDLIFSL True True IQHDLIFSL 100.92573 543.302966296673 1377731.625 20651.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 4.1757863362630205 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20659 100.94 675.0 243840.0 25 0 24457.0 + 38897 TVLEALQQL 9 163 507.7951328667489 1013.575712800298 2 507.7958251833916 MULTI CID FTMS 0 0 0 20651 110335.7578125 0.3113204115864021 5 -0.4604034423828125 8 Unmodified _TVLEALQQL_ ENSG00000163930|ENST00000460680|BAP1 67.34385681178166 0.0221257235307089 3 {[TV]|[{I|L}S]}{I|L}EA{I|L} 6 3 55.215 0.0 0.0 5.4476 0.0 0.0 0.0 384.1917883452517 384.1917883452517 26.27022016502943 0.0 0.0 0.0 0 0.0 2.0 1.759053043163611 0.0 + {[TV]|[{I|L}S]}{I|L}EA{I|L} 5.4476 + + 1591 1 1.742 129634.1 1.0 14769 5888 20651 HBL1_DMSO_200M_050219_1,20659 HBL1_DMSO_200M_050219_1,20659,TVLEALQQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20660 100.95 456.0 282970.0 25 0 24752.0 -1 0 147 930.978668600522 1859.942784267844 2 931.4821044802666 MULTI CID FTMS 0 0 0 20651 104367.4453125 0.604572282119639 -4 0.1611709594726562 9 3 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[SG]M{I|L}A 8 -1 23.81 0.0 0.0 1.2802 0.0 0.0 0.0 1057.486033129425 1057.486033129425 6.768126896202702 0.0 0.0 0.0 0 0.0 2.0 0.2742275032520141 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[SG]M{I|L}A 1.2802 - 10152 1 1.742 82962.7 1.0 14770 5888 20651 HBL1_DMSO_200M_050219_1,20660 HBL1_DMSO_200M_050219_1,20660, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20661 100.96 800.0 363930.0 25 0 50477.0 + 20012 LIMELINNV 9 196 529.7987467816168 1057.5829406300336 2 529.7981445193291 MULTI CID FTMS 0 0 0 20651 108911.875 0.3814269863877545 -2 0.0766983032226562 10 Unmodified _LIMELINNV_ ENSG00000110955|ENST00000262030|ATP5F1B;ENST00000547250.5_1_12:57033951-57037708:-|nuORF 109.62928328672726 0.0058899017516516 3 {I|L}{I|L}EM{I|L}{I|L}C{I|L} 8 5 66.011 0.0 0.0 6.2417 0.0 0.0 0.0 126.04519583927107 126.04519583927107 41.50559600986684 0.0 0.0 0.0 0 1.1307196863200843 2.0 0.8609243748081781 0.0 {I|L}{I|L}EM{I|L}{I|L}C{I|L} 6.2417 - 3539 1 1.742 229070.6 0.4600000083446502 14771 5888 20651 HBL1_DMSO_200M_050219_1,20661 HBL1_DMSO_200M_050219_1,20661,LIMELINNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20662 100.97 491.0 221610.0 25 0 15039.0 + 22576 LPWVVAEV 8 119 912.5196766230408 911.5124001564408 1 912.5227538943292 MULTI CID FTMS 0 0 0 20651 96718.3984375 0.3901361069443219 5 -0.4604034423828125 11 Unmodified _LPWVVAEV_ ENSG00000065882|ENST00000698857|TBC1D1;nc|ENSG00000065882|Q86TI0-2|TBC1D1;nc|ENSG00000065882|Q86TI0|TBC1D1 42.96799951952854 0.1846367511955703 3 [WP]V{I|L}VAEV 8 2 + 67.211 0.0 0.0 7.3736 7.3736 83.25 0.0 0.0 0.0 2.04119982655925 16.40978057358332 2.04119982655925 2.04119982655925 0 0.3054621874040891 1.3010299956639813 0.0 0.0 [WP]V{I|L}VAEV;[{I|L}P]WVVAEV;[WP]{I|L}VVAEV;[WP]V{I|L}G{I|L}EV;[{I|L}P]WVG{I|L}EV;[WP]{I|L}VG{I|L}EV;[WP]V{I|L}GE{I|L}V;[WP]VV{I|L}AEV;[{I|L}P]WVGE{I|L}V;[WP]V{I|L}AVEV 7.3736;7.1497;7.0434;7.0434;6.8194;6.7131;6.7131;6.7082;6.4892;6.3828 -;+;-;-;-;-;-;-;-;- + 1789 1 1.742 75163.0 1.0 14772 5888 20651 HBL1_DMSO_200M_050219_1,20662 HBL1_DMSO_200M_050219_1,20662,LPWVVAEV False True LPWVVAEV 100.96928 912.522753894329 2083486.125 20651.0 ENSG00000065882|ENST00000698857|TBC1D1;;nc|ENSG00000065882|Q86TI0-2|TBC1D1;;nc|ENSG00000065882|Q86TI0|TBC1D1 2.6665109395980835 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20664 100.97 33.0 2609500.0 25 0 319930.0 + 2731 ATIEDILFKA 10 88 560.8159062027862 1119.6172594723723 2 560.8164550662041 MULTI CID FTMS 0 0 0 20663 1663670.5 1.0 0 0.0 1 Unmodified _ATIEDILFKA_ ENSG00000145736|ENST00000274400|GTF2H2;ENSG00000183474|ENST00000380729|GTF2H2C;ENST00000502619.5_1_5:68860950-68874677:+|nuORF;ENST00000507549.7_1_5:69716099-69717567:+|nuORF;ENST00000508065.7_1_5:69716099-69743177:+|nuORF;ENST00000508325.5_1_5:68860950-68862940:+|nuORF;ENST00000521942.5_1_5:70344502-70358599:-|nuORF;ENST00000522654.5_1_5:70344846-70358599:-|nuORF;ENST00000523003.5_1_5:70351153-70358599:-|nuORF 55.50274090549119 0.048383292844968 3 [TA]{I|L}ED{I|L}{I|L}{M(Oxidation (M))|F}[KA] 10 0 + 70.257 0.0 0.0 6.2751 6.2751 90.72 0.0 0.0 0.0 22.752195728047923 10.157242179326984 10.157242179326984 14.373281448025304 0 0.6747425010840047 1.6989700043360187 0.4247425010840047 0.2887254899964357 + + [TA]{I|L}ED{I|L}{I|L}{M(Oxidation (M))|F}[KA];[PG]{I|L}P{I|L}{I|L}DE{I|L}[PG];[VP]AP{I|L}{I|L}DE{I|L}[PG];{[QN]|[E{I|L}]|[KN]}D{I|L}[PG][{I|L}P]{I|L}[PG];{NN|[MP]|[D{I|L}]|[EV]}E{I|L}[PG][{I|L}P]{I|L}[PG];{[QN]|[E{I|L}]|[KN]}VE[PG][{I|L}P]{I|L}[PG];[R{M(Oxidation (M))|F}][KA]EDR[KA];{[QN]|[E{I|L}]|[KN]}D[PG]{I|L}[{I|L}P]{I|L}[PG];{NN|[MP]|[D{I|L}]|[EV]}{I|L}E[PG][{I|L}P]{I|L}[PG];[R{M(Oxidation (M))|F}]{[QV]|[N{I|L}]|[RA]|[KV]}TDR[KA] 6.2751;4.9913;3.8881;3.7534;3.1967;3.0151;3.0041;2.7183;2.4584;2.1936 +;-;-;-;-;-;-;-;-;- + 495 + 1 1.751 72667.5 1.0 14773 5889 20663 HBL1_DMSO_200M_050219_1,20664 HBL1_DMSO_200M_050219_1,20664,ATIEDILFKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20665 100.98 77.0 843230.0 25 0 49013.0 + 21396 LPFYFVQKI 9 101 577.8344486033412 1153.6543442734824 2 577.8349487185478 MULTI CID FTMS 0 0 0 20663 364870.1875 0.3438762420322211 4 -0.3776092529296875 2 Unmodified _LPFYFVQKI_ ENSG00000059378|ENST00000263549|PARP12 85.35673624503755 0.0162188719545379 3 {I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQK{I|L} 9 0 + 91.078 0.0 0.0 7.8947 7.8947 84.948 0.0 0.0 0.0 33.46787486224656 2.430380486862944 2.430380486862944 2.430380486862944 0 1.3243923658886183 1.6989700043360187 0.0 0.7302046884880937 + + {I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQK{I|L};{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQ{I|L}K;{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}V[AG]K{I|L};{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}V[AG]{I|L}K;{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}[KQ]V{I|L};{I|L}{I|L}MY{M(Oxidation (M))|F}VQK{I|L};{I|L}{I|L}MY{M(Oxidation (M))|F}VQ{I|L}K;{I|L}{I|L}MY{M(Oxidation (M))|F}V[AG]K{I|L};{I|L}{I|L}MY{M(Oxidation (M))|F}V[AG]{I|L}K;{I|L}{I|L}MY{M(Oxidation (M))|F}[KQ]V{I|L} 7.8947;7.6841;7.0965;6.8859;5.8394;5.5663;5.3556;4.7681;4.5575;3.5109 +;-;-;-;-;-;-;-;-;- + 1173 + 1 1.751 58010.4 1.0 14774 5889 20663 HBL1_DMSO_200M_050219_1,20665 HBL1_DMSO_200M_050219_1,20665,LPFYFVQKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20666 100.98 241.0 501580.0 25 0 50987.0 + 21671 LPLLVRVI 8 80 461.826006824906 921.637460716612 2 461.8261596560478 MULTI CID FTMS 0 0 0 20663 348384.96875 1.0 0 0.0 3 Unmodified _LPLLVRVI_ ENSG00000065150|ENST00000651721|IPO5;ENST00000468620.1_1_13:98670849-98672064:+|nuORF;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5 38.15118350030904 0.2652218139009398 3 {I|L}P{I|L}{I|L}V[R{I|L}]V 8 2 + 66.82 0.0 0.0 7.2502 7.2502 80.589 0.0 0.0 0.0 55.22669403309017 0.0101688921695597 0.0101688921695597 0.6694678963061307 0 1.1237125054200234 2.0 0.0 0.0 {I|L}P{I|L}{I|L}V[R{I|L}]V;{I|L}P{I|L}{I|L}V[RV]{I|L};{I|L}P{I|L}{I|L}[R{I|L}]VV 7.2502;7.1776;6.7325 -;+;- + 50 + 1 1.751 98880.4 1.0 14775 5889 20663 HBL1_DMSO_200M_050219_1,20666 HBL1_DMSO_200M_050219_1,20666,LPLLVRVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20667 100.99 388.0 273570.0 25 0 40822.0 + 25341 NALGVILQV 9 110 463.7870160387352 925.5594791442704 2 463.7873718142509 MULTI CID FTMS 0 0 0 20663 185071.234375 1.0 0 0.0 4 Unmodified _NALGVILQV_ ENSG00000204351|ENST00000375394|SKIC2;ENST00000461915.5_1_6:31934795-31936203:+|nuORF;ENST00000484835.1_1_6:31934891-31936687:+|nuORF;ENST00000494058.5_1_6:31934804-31935971:+|nuORF 85.35673624503755 0.0162188719545379 3 {[QG]|[NA]}{I|L}GV{I|L} 6 3 54.764 0.0 0.0 5.9169 0.0 0.0 0.0 355.1991635527266 355.1991635527266 37.386324234394905 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 1.3996498648046138 + {[QG]|[NA]}{I|L}GV{I|L} 5.9169 + + 648 1 1.751 87974.3 1.0 14776 5889 20663 HBL1_DMSO_200M_050219_1,20667 HBL1_DMSO_200M_050219_1,20667,NALGVILQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20668 100.99 299.0 363360.0 25 0 50832.0 + 37398 TLAKYLMEL 9 126 541.3008786965996 1080.5872044599992 2 541.3020507693291 MULTI CID FTMS 0 0 0 20663 184008.453125 0.7080930791771153 -2 0.1041717529296875 5 Unmodified _TLAKYLMEL_ ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1 86.33184430468982 0.0159826143231117 3 [{I|L}T]AKY{I|L}ME{I|L} 9 0 + 59.54 0.0 0.0 5.5099 5.5099 79.709 0.0 0.0 0.0 12.363715560249569 3.269921747127505 3.269921747127505 3.269921747127505 0 1.8979400086720373 2.0 0.9802046884880936 0.0 + + [{I|L}T]AKY{I|L}ME{I|L};[{I|L}T]A{M(Oxidation (M))|F}MTA{I|L}T{I|L};[{I|L}T]AKYM{I|L}E{I|L};[{I|L}T]A{M(Oxidation (M))|F}MTAT{I|L}{I|L};[{I|L}T]A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}E{I|L};[Y{I|L}]MKAT{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}MYKA{I|L}T{I|L};[Y{I|L}]MKAE{I|L}T{I|L};[{I|L}T]AKY{I|L}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}[RH]A{I|L}{M(Oxidation (M))|F}PV 5.5099;5.2073;5.0602;4.5723;4.3669;4.3658;4.3413;4.3067;4.2635;4.2475 +;-;-;-;-;-;-;-;-;- + 2033 1 1.751 86849.8 1.0 14777 5889 20663 HBL1_DMSO_200M_050219_1,20668 HBL1_DMSO_200M_050219_1,20668,TLAKYLMEL True True TLAKYLMEL 100.99271 541.302050769329 8064452.0 20663.0 ENSG00000134057|ENST00000256442|CCNB1;;ENSG00000157456|ENST00000288207|CCNB2;;nc|ENSG00000134057|P14635-2|CCNB1 5.849005063374837 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20669 101.0 503.0 370120.0 25 0 15497.0 -1 0 136 872.4175932028735 3485.641266945094 4 872.9218017458916 MULTI CID FTMS 0 0 0 20663 162411.0 0.0068551253871152 -4 0.1912918090820312 6 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 38.07 0.0 0.0 1.0922 0.0 0.0 0.0 2445.032111021518 2445.032111021518 0.4898827077668457 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.0922 - 1061 1 1.751 120782.9 1.0 14778 5889 20663 HBL1_DMSO_200M_050219_1,20669 HBL1_DMSO_200M_050219_1,20669, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20670 101.01 565.0 198970.0 25 0 20160.0 + 15658 IQLPDSVNQLL 11 134 620.348536457024 1238.682519980848 2 620.3517333865166 MULTI CID FTMS 0 0 0 20663 155477.296875 0.726156378776207 3 -0.2481460571289062 7 Unmodified _IQLPDSVNQLL_ ENSG00000119777|ENST00000238788|TMEM214;ENST00000469445.1_1_2:27263203-27263702:+|nuORF;nc|ENSG00000119777|Q6NUQ4-2|TMEM214 67.83816525789305 0.0386695545555003 3 [Q{I|L}]{I|L}[NG]QVNQ{I|L}{I|L} 11 3 + 54.341 0.0 0.0 4.387 4.387 71.832 0.0 0.0 0.0 0.87560257754415 7.367585652254185 0.87560257754415 0.87560257754415 0 0.7059771852360797 0.958607314841775 0.0 1.048455006504028 [Q{I|L}]{I|L}[NG]QVNQ{I|L}{I|L};[DP]SVNQ{I|L}{I|L}Q{I|L}{I|L};[Q{I|L}]{I|L}[PA]MVNQ{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{[VA]|[{I|L}G]}QVNQ{I|L}{I|L};[Q{I|L}]N[TP]{[CP]|[EA]}{I|L}Q{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[VG]NQ{I|L}Q{I|L}{I|L};[Q{I|L}]T[WP]Q{I|L}Q{I|L}{I|L};[Q{I|L}]T[NP]{[CP]|[EA]}{I|L}Q{I|L}{I|L};[Q{I|L}]N[VG]NQ{I|L}Q{I|L}{I|L};[PA]ETNQ{I|L}{I|L}Q{I|L}{I|L} 4.387;4.3163;4.3088;4.2226;4.0955;4.0588;4.0281;4.0173;3.9446;3.9439 -;-;-;-;-;-;-;-;-;- 9728 1 1.751 87432.9 1.0 14779 5889 20663 HBL1_DMSO_200M_050219_1,20670 HBL1_DMSO_200M_050219_1,20670,IQLPDSVNQLL True True IQLPDSVNQLL 101.01154 620.351733386517 4240198.0 20663.0 nc|ENSG00000119777|Q6NUQ4-2|TMEM214;;ENSG00000119777|ENST00000238788|TMEM214;;ENST00000469445.1_1_2:27263203-27263702:+|nuORF 3.5322425365448 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20671 101.02 554.0 227290.0 25 0 36151.0 + 4027 DALRSILTI 9 125 501.3030275794831 1000.591502225766 2 501.3039428591728 MULTI CID FTMS 0 0 0 20663 147086.59375 0.0010752230713725 42 -2.495147705078125 8 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 100.0907132914201 0.0108732765679663 3 {[DA]|[EG]}{I|L}RS{I|L}{I|L}T{I|L} 9 0 + 87.968 0.0 0.0 8.7916 8.7916 83.982 0.0 0.0 0.0 1.0340874929963917 16.478174818886373 1.0340874929963917 1.0340874929963917 0 1.8494850021680087 1.3010299956639813 0.75 0.6109243748081782 + + {[DA]|[EG]}{I|L}RS{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}GRS{I|L}{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}ARS{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}G[VG]S{I|L}{I|L}T{I|L};[{I|L}A]DRS{I|L}{I|L}T{I|L};[{I|L}T]R[DG]{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}D{I|L}T{I|L};[{I|L}T]R{[VA]|[{I|L}G]}D{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}K[DG]{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}K{[VA]|[{I|L}G]}D{I|L}T{I|L} 8.7916;8.6882;7.9994;7.768;7.7565;7.5548;7.2936;6.9927;6.8385;6.2764 +;-;-;-;-;-;-;-;-;- + 1894 1 1.751 98618.4 1.0 14780 5889 20663 HBL1_DMSO_200M_050219_1,20671 HBL1_DMSO_200M_050219_1,20671,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20672 101.03 270.0 232610.0 25 0 32500.0 + + -1 MARLDFNLI 9 94 546.7974536561992 1091.5803543791983 2 546.7972900271416 MULTI CID FTMS 0 0 0 20663 130848.734375 0.5895787235381712 4 -0.3776092529296875 9 2 Oxidation (M) _VLGAM(Oxidation (M))GM(Oxidation (M))RIL_ nc|ENSG00000138363|P31939-2|ATIC;ENST00000427397.5_1_2:216176945-216197107:+|nuORF;ENST00000488712.5_1_2:216176805-216189903:+|nuORF;ENSG00000138363|ENST00000236959|ATIC;ENST00000443953.5_1_2:216177073-216214375:+|nuORF 21.74664581756881 0.480091245866545 3 [{I|L}V]Q[MD]{M(Oxidation (M))|F}N{I|L}{I|L} 9 -1 + 51.308 0.0 0.0 4.7003 4.7003 83.368 0.0 0.0 0.0 13.46787486224656 14.09256854528806 13.46787486224656 9.208187539523747 0 0.6747425010840047 1.6989700043360187 0.0 0.0 [{I|L}V]Q[MD]{M(Oxidation (M))|F}N{I|L}{I|L};[{I|L}V]Q[MD]{M(Oxidation (M))|F}GG{I|L}{I|L};[{I|L}V][AG][MD]{M(Oxidation (M))|F}N{I|L}{I|L};[VS][TA]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}N{I|L}{I|L};[{I|L}T]WW{M(Oxidation (M))|F}N{I|L}{I|L};[{I|L}V][Y{M(Oxidation (M))|F}][NP]N{I|L}{I|L};[{I|L}T][SG]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}N{I|L}{I|L};[{I|L}V]Q{[CA]|SS}[W{M(Oxidation (M))|F}]{I|L}{I|L};[Q{I|L}]V[MD]{M(Oxidation (M))|F}N{I|L}{I|L};[VS]MY[RP]N{I|L}{I|L} 4.7003;3.8568;3.8568;3.4665;3.258;3.1439;3.0079;2.9826;2.9406;2.8045 -;-;-;-;-;-;-;-;-;- 375 1 1.751 53345.7 1.0 14781 5889 20663 HBL1_DMSO_200M_050219_1,20672 HBL1_DMSO_200M_050219_1,20672,VLGAMGMRIL False False MARLDFNLI 101.02625 546.797290027142 2017552.25 20663.0 nc|ENSG00000138363|P31939-2|ATIC;;ENST00000427397.5_1_2:216176945-216197107:+|nuORF;;ENST00000488712.5_1_2:216176805-216189903:+|nuORF;;ENSG00000138363|ENST00000236959|ATIC;;ENST00000443953.5_1_2:216177073-216214375:+|nuORF 1.6620227495829265 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20673 101.04 800.0 312740.0 25 0 6934.9 -1 0 148 1155.7787736408627 0 1155.778857409954 PEAK CID FTMS 0 0 0 20663 116251.1875 1.0 0 0.0 10 3 VQY{M(Oxidation (M))|F}A 5 -1 29.38 0.0 0.0 1.2721 0.0 0.0 679.8248168936713 1018.3961385959068 1698.220955489578 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 VQY{M(Oxidation (M))|F}A 1.2721 - 1872 + 1 1.751 144770.5 0.6800000071525574 14782 5889 20663 HBL1_DMSO_200M_050219_1,20673 HBL1_DMSO_200M_050219_1,20673, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20674 101.05 297.0 372310.0 25 0 50689.0 + 15809 ISGANIAQFI 10 134 517.2871276286431 1032.5597023240862 2 517.2874633669853 MULTI CID FTMS 0 0 0 20663 121387.234375 1.0 0 0.0 11 Unmodified _ISGANIAQFI_ REV__ENSG00000170921|ENST00000689528|TANC2;REV__ENST00000583545.1_1_17:61432467-61466989:+|nuORF;REV__nc|ENSG00000170921|Q9HCD6-2|TANC2;REV__nc|ENSG00000170921|Q9HCD6-3|TANC2;REV__nc|ENSG00000170921|Q9HCD6-4|TANC2;REV__nc|ENSG00000170921|Q9HCD6|TANC2 13.90604991867851 0.6142120002215601 3 {[TV]|[{I|L}S]}[C(Carbamidomethyl (C))R][WK]A{I|L} 8 -1 + 25.864 0.0 0.0 2.5048 2.5048 73.357 0.0 0.0 0.0 5.740312677277188 6.822581265925432 5.740312677277188 4.771212547196619 0 0.0 1.0969100130080565 0.0 0.0 {[TV]|[{I|L}S]}[C(Carbamidomethyl (C))R][WK]A{I|L};{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))R]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L};{NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C))K][WK]A{I|L};{NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C))K]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L};[EC][RK][WK]A{I|L};[EC]S{I|L}{I|L}[R{I|L}]S{I|L};[EC][RK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[DV]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L};[EC]{I|L}[R{I|L}]{[WT]|[RM]}{I|L};{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))R]RRSV 2.5048;2.0427;1.8279;1.3658;1.151;0.94816;0.68887;0.61642;0.27634;0.085278 -;-;-;-;-;-;-;-;-;- 654 + 1 1.751 89682.7 1.0 14783 5889 20663 HBL1_DMSO_200M_050219_1,20674 HBL1_DMSO_200M_050219_1,20674,ISGANIAQFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20675 101.06 800.0 130890.0 25 0 1946.1 -1 0 154 1079.487719714642 0 1079.487719714642 PEAK CID FTMS 0 0 0 -1 0 12 3 V{I|L}{[RE]|[WV]}PA 6 -1 11.691 0.0 0.0 0.542 0.0 0.0 1337.4937977283091 151.05213342838127 1488.5459311566904 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 V{I|L}{[RE]|[WV]}PA 0.542 - 206 + 1 1.751 64276.0 0.5600000023841858 14784 5889 20663 HBL1_DMSO_200M_050219_1,20675 HBL1_DMSO_200M_050219_1,20675, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20677 101.07 34.0 2490300.0 25 0 696880.0 + 24838 MPKTGFLII 9 75 510.3014963088324 1018.5884396844648 2 510.3018981814384 MULTI CID FTMS 0 0 0 20676 1371338.875 0.54208961657823 1 -0.0585861206054687 1 Unmodified _MPKTGFLII_ ENSG00000197172|ENST00000329342|MAGEA6;ENSG00000198681|ENST00000356661|MAGEA1 34.40172386719151 0.1061884637610825 3 TMTKPM{I|L}{I|L} 8 6 56.953 0.0 0.0 5.5914 0.0 0.0 85.08992964912265 0.0 85.08992964912265 0.0 45.52653036608638 0.0 0.0 0 0.9247425010840048 0.0 0.6382104921644451 0.0 TMTKPM{I|L}{I|L} 5.5914 - 421 1 1.761 67331.5 1.0 14785 5890 20676 HBL1_DMSO_200M_050219_1,20677 HBL1_DMSO_200M_050219_1,20677,MPKTGFLII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20678 101.07 41.0 1926900.0 25 0 233870.0 + 25609 NFPEHIFPAL 10 83 592.8085477936168 1183.6025426540334 2 592.8087646365166 MULTI CID FTMS 0 0 0 20676 1298687.25 0.1190295927135246 -5 0.282440185546875 2 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 47.7319792270244 0.0934623409360514 3 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 8 8 52.657 0.0 0.0 4.4488 0.0 0.0 0.0 126.03536401920157 126.03536401920157 24.59900932367709 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.805462187404089 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 4.4488 - 533 + 1 1.761 64959.0 1.0 14786 5890 20676 HBL1_DMSO_200M_050219_1,20678 HBL1_DMSO_200M_050219_1,20678,NFPEHIFPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20679 101.07 355.0 1316100.0 25 0 61639.0 -1 0 180 1162.8876223461473 3485.641037638642 3 1163.556567370892 MULTI CID FTMS 0 0 0 20676 957020.875 0.2491415769497783 -2 0.1739425659179687 3 3 [H{I|L}]VEA{I|L}Y{I|L}VH 10 -1 71.86 0.0 0.0 2.0616 0.0 0.0 0.0 2307.984518433817 2307.984518433817 35.51152522447381 0.0 0.0 0.0 0 3.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}VH 2.0616 - 3382 1 1.761 275437.9 1.0 14787 5890 20676 HBL1_DMSO_200M_050219_1,20679 HBL1_DMSO_200M_050219_1,20679, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20680 101.08 175.0 387830.0 25 0 54878.0 + 36653 TAVESFLTI 9 97 490.7687604328746 979.5229679325494 2 490.7687866091728 MULTI CID FTMS 0 0 0 20676 362491.53125 0.5768295770904991 -3 0.1953201293945312 4 Unmodified _TAVESFLTI_ ENSG00000143653|ENST00000366510|SCCPDH 34.10243960390752 0.1078313939113124 3 [{I|L}T]{I|L}CGE{I|L} 7 7 46.075 0.0 0.0 4.7038 0.0 0.0 0.0 247.1415341769431 247.1415341769431 24.30141942712712 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.6109243748081782 0.0 [{I|L}T]{I|L}CGE{I|L} 4.7038 - 648 1 1.761 57101.0 1.0 14788 5890 20676 HBL1_DMSO_200M_050219_1,20680 HBL1_DMSO_200M_050219_1,20680,TAVESFLTI True True TAVESFLTI 101.07617 490.768786609173 20378337.0 20676.0 ENSG00000143653|ENST00000366510|SCCPDH 3.759342193603516 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20681 101.08 180.0 577550.0 25 0 45072.0 -1 0 128 960.4565677771157 1918.898582621031 2 960.9583007693292 MULTI CID FTMS 0 0 0 20676 274427.15625 0.4887159786430525 -1 0.0911483764648437 5 3 V{I|L}N{I|L}W{I|L}{[QG]|[NA]} 8 -1 43.959 0.0 0.0 2.2909 0.0 0.0 977.3562375055998 0.0 977.3562375055998 0.0 29.383035587213904 0.0 0.0 0 0.0 0.0 0.0 1.6237125054200234 V{I|L}N{I|L}W{I|L}{[QG]|[NA]} 2.2909 - 2317 + 1 1.761 72303.0 1.0 14789 5890 20676 HBL1_DMSO_200M_050219_1,20681 HBL1_DMSO_200M_050219_1,20681, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20682 101.09 315.0 324640.0 25 0 17433.0 + 10130 FPWPKVLKI 9 105 564.3527799952674 1126.691007057335 2 564.3528320193291 MULTI CID FTMS 0 0 0 20676 231520.421875 0.7305237633958628 1 -0.0585861206054687 6 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 67.83816525789305 0.0219346420158844 3 {I|L}MWPKV{I|L}K{I|L} 9 2 + 79.893 0.0 0.0 7.091 7.091 88.123 0.0 0.0 0.0 16.989700043360187 6.495649986126637 6.495649986126637 6.495649986126637 0 1.9291746928241125 2.0 0.0 0.25 {I|L}MWPKV{I|L}K{I|L};{I|L}MWPKV{I|L}{I|L}K;[WP]KV{I|L}M{I|L}K{I|L};[WP]KV{I|L}P{M(Oxidation (M))|F}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}K{I|L};[WP]KV{I|L}KP{M(Oxidation (M))|F}{I|L};[WP]KVP{M(Oxidation (M))|F}{I|L}K{I|L};[WP]KV{I|L}PK{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K;[WP]KVP{I|L}{M(Oxidation (M))|F}K{I|L} 7.091;6.5144;5.8138;5.5868;5.583;5.5653;5.1934;5.1418;5.0065;4.9664 -;-;-;-;+;-;-;-;-;- + 1117 + 1 1.761 84108.3 1.0 14790 5890 20676 HBL1_DMSO_200M_050219_1,20682 HBL1_DMSO_200M_050219_1,20682,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20683 101.09 332.0 554730.0 25 0 125160.0 + 10122 FPWPKVLKI 9 113 376.570766370445 1126.6904697115351 3 376.5706664919853 MULTI CID FTMS 0 0 0 20676 178851.46875 0.3984088142631857 2 -0.1569976806640625 7 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 49.55428908609986 0.0413471690215031 3 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 53.85 0.0 0.0 4.7795 4.7795 75.27 0.0 0.0 0.0 12.949624067838316 2.218487496163561 2.218487496163561 2.218487496163561 0 0.5941876774005248 0.0 0.0 0.566901560044258 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K 4.7795;4.5826 +;- + 424 + 1 1.761 154162.8 1.0 14791 5890 20676 HBL1_DMSO_200M_050219_1,20683 HBL1_DMSO_200M_050219_1,20683,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20684 101.11 800.0 130530.0 25 0 13316.0 + 44277 YLLNDASLISV 11 132 604.3321463901518 1206.6497398471035 2 604.3325073122978 MULTI CID FTMS 0 0 0 20676 170840.75 1.0 0 0.0 8 Unmodified _YLLNDASLISV_ nc|ENSG00000170791|Q9BUK0-3|CHCHD7;nc|ENSG00000170791|Q9BUK0-5|CHCHD7 47.74868867922204 0.1300977870992118 3 [VS]{[CP]|[EA]}N{I|L}Y{I|L}G 9 9 39.359 0.0 0.0 3.2618 0.0 0.0 0.0 257.1732910118587 257.1732910118587 19.053871564675354 0.0 0.0 0.0 0 0.25 1.3979400086720375 2.2104093769761874 0.6549471895720985 [VS]{[CP]|[EA]}N{I|L}Y{I|L}G 3.2618 - 1790 1 1.761 77248.4 0.6100000143051147 14792 5890 20676 HBL1_DMSO_200M_050219_1,20684 HBL1_DMSO_200M_050219_1,20684,YLLNDASLISV False True YLLNDASLISV 101.10529 604.332507312298 1841731.75 20676.0 nc|ENSG00000170791|Q9BUK0-3|CHCHD7;;nc|ENSG00000170791|Q9BUK0-5|CHCHD7 4.000561793645223 2.0 True 11.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 20685 101.11 278.0 141710.0 25 0 4786.7 -1 0 83 1175.500048816204 0 1175.500048816204 PEAK CID FTMS 0 0 0 -1 0 9 3 C(Carbamidomethyl (C)) 1 -1 3.9794 0.0 0.0 0.16941 0.0 0.0 1501.4509458156615 684.5001314752561 2185.951077290917 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.16941 - 15 + 1 1.761 31650.7 1.0 14793 5890 20676 HBL1_DMSO_200M_050219_1,20685 HBL1_DMSO_200M_050219_1,20685, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20686 101.12 488.0 547060.0 25 0 60758.0 + 45466 YTIPLAIKL 9 157 516.3292951549709 1030.6440373767416 2 516.3301269412041 MULTI CID FTMS 0 0 0 20676 94764.21875 0.6820612748651012 -1 0.0911483764648437 10 Unmodified _YTIPLAIKL_ ENSG00000101464|ENST00000217446|PIGU;nc|ENSG00000101464|Q9H490-2|PIGU 41.8396318013385 0.0653578398400075 3 YT{I|L}P{I|L}A{I|L}K{I|L} 9 0 + 64.951 0.0 0.0 6.302 6.302 78.326 0.0 0.0 0.0 30.457574905606748 9.294189257142932 9.294189257142932 0.9691001300805624 0 0.3807196863200844 1.3979400086720375 0.0 0.1861818737241735 + + YT{I|L}P{I|L}A{I|L}K{I|L};YT{I|L}{I|L}PA{I|L}K{I|L};YT{I|L}P{I|L}{I|L}AK{I|L};YT{I|L}{I|L}P{I|L}AK{I|L};YT{I|L}P{I|L}{I|L}KA{I|L};YT{I|L}{I|L}P{I|L}KA{I|L};YT{I|L}P{I|L}A{I|L}{I|L}K;YT{I|L}{I|L}PA{I|L}{I|L}K;YT{I|L}P{I|L}{I|L}A{I|L}K;YT{I|L}{I|L}P{I|L}A{I|L}K 6.302;6.208;6.0099;5.9159;5.4971;5.403;5.4002;5.3062;5.1082;5.0141 +;-;-;-;-;-;-;-;-;- + 496 + 1 1.761 205533.8 1.0 14794 5890 20676 HBL1_DMSO_200M_050219_1,20686 HBL1_DMSO_200M_050219_1,20686,YTIPLAIKL True True YTIPLAIKL 101.11908 516.330126941204 941693.375 20676.0 ENSG00000101464|ENST00000217446|PIGU;;nc|ENSG00000101464|Q9H490-2|PIGU 6.333144823710124 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20688 101.13 488.0 270490.0 25 0 49794.0 + 23077 LSLQDLPLL 9 126 506.3090463763725 1010.6035398195452 2 506.3088561892509 MULTI CID FTMS 0 0 0 20687 95965.9140625 0.1808396229615044 3 -0.3478851318359375 1 Unmodified _LSLQDLPLL_ REV__ENSG00000124496|ENST00000695948|TRERF1;REV__nc|ENSG00000124496|Q96PN7-2|TRERF1;REV__nc|ENSG00000124496|Q96PN7-3|TRERF1;REV__nc|ENSG00000124496|Q96PN7-4|TRERF1;REV__nc|ENSG00000124496|Q96PN7-5|TRERF1;REV__nc|ENSG00000124496|Q96PN7|TRERF1 52.268347100219714 0.0353964759249114 3 {[TV]|[{I|L}S]}{I|L}QEV 6 -1 49.232 0.0 0.0 4.8715 0.0 0.0 0.0 338.2090812827093 338.2090812827093 20.48415369898434 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.6307196863200843 0.4247425010840047 {[TV]|[{I|L}S]}{I|L}QEV 4.8715 - 1657 1 1.761 110994.5 1.0 14795 5891 20687 HBL1_DMSO_200M_050219_1,20688 HBL1_DMSO_200M_050219_1,20688,LSLQDLPLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20689 101.13 140.0 1333400.0 25 0 253250.0 + 45625 YVLPDFSTI 9 127 1054.545694713203 1053.538418246603 1 1054.546313464642 MULTI CID FTMS 0 0 0 20687 511644.84375 0.3121033570282752 3 -0.3478851318359375 2 Unmodified _YVLPDFSTI_ ENSG00000075089|ENST00000188312|ACTR6;ENST00000553038.5_1_12:100606046-100635559:+|nuORF 92.8221339359638 0.0138398038803217 3 [DP]{M(Oxidation (M))|F}YR{I|L}M{I|L} 8 7 + 71.419 0.0 0.0 6.779 6.779 81.802 0.0 0.0 0.0 2.4703909301496907 14.904630595263413 2.4703909301496907 2.174839442139074 0 0.9247425010840048 1.3010299956639813 0.8807196863200843 0.0 [DP]{M(Oxidation (M))|F}YR{I|L}M{I|L};[DP]{I|L}C{I|L}H{I|L}M{I|L};[YV]{I|L}[DP]{M(Oxidation (M))|F}ST{I|L};[YV]{I|L}[MD]{I|L}ST{I|L};[DP]{M(Oxidation (M))|F}YV{I|L}ST{I|L};[DP]{M(Oxidation (M))|F}ST{I|L}[YV]{I|L};[YV]{I|L}[MD]S{I|L}T{I|L};[DP]{M(Oxidation (M))|F}S[YV]{I|L}T{I|L};[DP]{M(Oxidation (M))|F}S{I|L}[YV]T{I|L};[DP]{M(Oxidation (M))|F}YVS{I|L}T{I|L} 6.779;6.5726;6.5445;6.2049;6.0863;5.9417;5.7787;5.7607;5.6757;5.6601 -;-;+;-;-;-;-;-;-;- + 3592 1 1.761 118792.9 1.0 14796 5891 20687 HBL1_DMSO_200M_050219_1,20689 HBL1_DMSO_200M_050219_1,20689,YVLPDFSTI True True YVLPDFSTI 101.13287 1054.54631346464 13513908.0 20687.0 ENST00000553038.5_1_12:100606046-100635559:+|nuORF;;ENSG00000075089|ENST00000188312|ACTR6 6.460483392079671 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20690 101.14 249.0 1054100.0 25 0 67219.0 -1 0 158 698.135186505527 3485.639550194635 5 698.5370971560478 MULTI CID FTMS 0 0 0 20687 369275.84375 0.644335641350454 -2 0.1497344970703125 3 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 55.517 0.0 0.0 1.5927 0.0 0.0 0.0 2445.026235622692 2445.026235622692 3.741188331672788 0.0 0.0 0.0 0 0.3494850021680094 0.0 1.2179001828205482 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.5927 - 5144 1 1.761 191483.7 1.0 14797 5891 20687 HBL1_DMSO_200M_050219_1,20690 HBL1_DMSO_200M_050219_1,20690, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20691 101.15 496.0 353350.0 25 0 50533.0 + 32515 SALPDIKVLTL 11 130 585.3607569749753 1168.7069610167505 2 585.3607055544853 MULTI CID FTMS 0 0 0 20687 219485.546875 0.0691760407818825 7 -0.8141403198242188 4 Unmodified _SALPDIKVLTL_ ENSG00000115241|ENST00000344034|PPM1G;ENST00000472077.1_1_2:27604468-27607956:-|nuORF 79.42699986076722 0.0080827643292781 3 {[SA]|[TG]}{I|L}A{I|L}P{I|L}TG{I|L}[{I|L}T] 12 5 + 87.991 0.0 0.0 7.529 7.529 82.666 0.0 0.0 0.0 9.385376100534202 5.942124970647029 5.942124970647029 1.4916623986031396 0 1.5 1.5228787452803376 1.774227503252014 0.0 {[SA]|[TG]}{I|L}A{I|L}P{I|L}TG{I|L}[{I|L}T];{[SA]|[TG]}{I|L}A{I|L}P{I|L}T{I|L}G[{I|L}T];{[SA]|[TG]}{I|L}A{I|L}PT{I|L}G{I|L}[{I|L}T];{[SA]|[TG]}{I|L}A{I|L}PT{I|L}{I|L}G[{I|L}T];[DP]{I|L}KV{I|L}TG{I|L}[{I|L}T];[DP]{I|L}KV{I|L}T{I|L}G[{I|L}T];{[SA]|[TG]}{I|L}P[{I|L}A]{I|L}TG{I|L}[{I|L}T];{[SA]|[TG]}{I|L}A{I|L}{I|L}PTG{I|L}[{I|L}T];{[SA]|[TG]}{I|L}P[{I|L}A]{I|L}T{I|L}G[{I|L}T];{[SA]|[TG]}{I|L}A{I|L}{I|L}PT{I|L}G[{I|L}T] 7.529;7.4013;6.9102;6.7825;6.7259;6.5983;6.3994;6.3928;6.2718;6.2652 -;-;-;-;-;-;-;-;-;- 4680 1 1.761 135659.5 1.0 14798 5891 20687 HBL1_DMSO_200M_050219_1,20691 HBL1_DMSO_200M_050219_1,20691,SALPDIKVLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20692 101.16 800.0 610820.0 25 0 66477.0 -1 0 163 1184.2721680618768 0 1184.030688464642 PEAK CID FTMS 0 0 0 -1 0 5 3 Y[KG]NAP{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L} 10 -1 45.271 0.0 0.0 1.913 0.0 0.0 851.7783926649662 360.1317537897094 1211.9101464546757 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.4916440611282626 Y[KG]NAP{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L} 1.913 - 4104 + 1 1.761 294855.5 0.699999988079071 14799 5891 20687 HBL1_DMSO_200M_050219_1,20692 HBL1_DMSO_200M_050219_1,20692, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20693 101.17 617.0 465140.0 25 0 14336.0 + 1226 AIIGGMFTV 9 165 908.4907164664388 907.4834399998388 1 908.4915649294852 MULTI CID FTMS 0 0 0 20687 121428.71875 0.0243794094410726 8 -0.9685821533203124 6 Unmodified _AIIGGMFTV_ ENSG00000125991|ENST00000348547|ERGIC3;ENST00000488384.1_1_20:34144716-34145272:+|nuORF;nc|ENSG00000125991|Q9Y282-3|ERGIC3 93.88341677533236 0.0134066622201488 3 [{I|L}A]NM{I|L}{M(Oxidation (M))|F}TV 8 4 + 71.452 0.0 0.0 7.8736 7.8736 88.389 0.0 0.0 0.0 16.453650195120844 41.1401347008929 16.453650195120844 4.771212547196626 0 1.1549471895720984 1.0969100130080565 0.3807196863200844 0.0 [{I|L}A]NM{I|L}{M(Oxidation (M))|F}TV;[{I|L}A]N{I|L}M{M(Oxidation (M))|F}TV;[{I|L}A]GGM{I|L}{M(Oxidation (M))|F}TV;[{I|L}A]NM{M(Oxidation (M))|F}{I|L}TV;[{I|L}A]NM{M(Oxidation (M))|F}T{I|L}V;[{I|L}A]GG{I|L}M{M(Oxidation (M))|F}TV;[{I|L}A]GGM{M(Oxidation (M))|F}{I|L}TV;[{I|L}A]{[CA]|SS}A{I|L}{M(Oxidation (M))|F}TV;[{I|L}A]GGM{M(Oxidation (M))|F}T{I|L}V;[MN]{I|L}A{I|L}{M(Oxidation (M))|F}TV 7.8736;7.3478;7.3245;7.1568;6.9845;6.7987;6.6076;6.5077;6.4354;5.9394 -;-;-;-;-;-;-;-;-;- 5459 1 1.761 181155.3 1.0 14800 5891 20687 HBL1_DMSO_200M_050219_1,20693 HBL1_DMSO_200M_050219_1,20693,AIIGGMFTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20694 101.18 800.0 165280.0 25 0 18029.0 -1 0 107 1167.4924480481477 3499.455514744644 3 1168.496997058392 MULTI CID FTMS 0 0 0 20687 140457.09375 1.0 0 0.0 7 3 Y 1 -1 6.9897 0.0 0.0 0.19974 0.0 0.0 1456.5051496096803 1876.8755587213504 3333.3807083310307 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.19974 - 14 + 1 1.761 88725.8 0.6700000166893005 14801 5891 20687 HBL1_DMSO_200M_050219_1,20694 HBL1_DMSO_200M_050219_1,20694, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20695 101.2 732.0 397670.0 25 0 66138.0 + 1310 AIVDLIHDI 9 162 504.78979529645216 1007.5650376597044 2 504.7903320193291 MULTI CID FTMS 0 0 0 20687 122621.546875 0.0198483754871284 8 -0.9685821533203124 8 Unmodified _AIVDLIHDI_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 74.42276476219924 0.019389277360085 3 [{I|L}A]VD{I|L}{I|L}HD{I|L} 9 0 + 83.572 0.0 0.0 8.2944 8.2944 88.815 0.0 0.0 0.0 27.147642715192504 4.7458590216530325 4.7458590216530325 4.7458590216530325 0 0.9876954943324544 2.0 1.8001648626366045 0.0 + + [{I|L}A]VD{I|L}{I|L}HD{I|L};[{I|L}A]VD{I|L}{I|L}{I|L}[HD];[{I|L}A]VD{I|L}{I|L}HEV;[{I|L}A]V{I|L}D{I|L}HD{I|L};[{I|L}A]V{I|L}D{I|L}{I|L}[HD];[{I|L}A]V{I|L}D{I|L}HEV;[{I|L}A]VD{I|L}[HD]{I|L}{I|L};[{I|L}A]{I|L}VD{I|L}HD{I|L};[{I|L}A]V{I|L}D[HD]{I|L}{I|L};[{I|L}A]{I|L}VD{I|L}{I|L}[HD] 8.2944;7.8234;7.7755;7.6199;7.1489;7.101;6.9493;6.5641;6.2748;6.093 +;-;-;-;-;-;-;-;-;- + 4001 + 1 1.761 218393.5 1.0 14802 5891 20687 HBL1_DMSO_200M_050219_1,20695 HBL1_DMSO_200M_050219_1,20695,AIVDLIHDI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20696 101.21 524.0 207460.0 25 0 12830.0 + -1 DALNAWQLV 9 117 1029.5346895167388 0 1029.534106433392 PEAK CID FTMS 0 0 0 20687 128088.8125 1.0 0 0.0 9 ENSG00000138363|ENST00000236959|ATIC;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC 3 TV{I|L}QDAANE 9 -1 67.016 0.0 0.0 3.2579 0.0 0.0 945.4759209262528 167.08356653385002 1112.559487460103 0.0 0.0 0.0 0.0 0 0.0 0.0 1.5253187046026266 1.9049471895720984 TV{I|L}QDAANE 3.2579 - 7911 + 1 1.761 73707.4 1.0 14803 5891 20687 HBL1_DMSO_200M_050219_1,20696 HBL1_DMSO_200M_050219_1,20696, False False DALNAWQLV 101.20824 1029.53410643339 594650.5625 20687.0 ENSG00000138363|ENST00000236959|ATIC;;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;;nc|ENSG00000138363|P31939-2|ATIC 6.839053471883138 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20697 101.22 534.0 402020.0 25 0 37501.0 + 34735 SPYPWPLNHI 10 137 612.3146212862029 0 612.3140746951103 PEAK CID FTMS 0 0 0 20687 97620.046875 0.1310524972431012 17 -1.8283233642578125 10 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 114.6490535036381 4.649877231068323e-06 3 YP{[DA]|[EG]}{I|L}PN 7 7 57.341 0.0 0.0 4.6901 0.0 0.0 184.08439911539227 265.13115832188214 449.2155574372744 0.0 0.0 0.0 0.0 0 1.7881068352144718 0.0 0.9802046884880936 1.8098943791441968 YP{[DA]|[EG]}{I|L}PN 4.6901 - 1298 + 1 1.761 157772.3 1.0 14804 5891 20687 HBL1_DMSO_200M_050219_1,20697 HBL1_DMSO_200M_050219_1,20697,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20699 101.22 18.0 8325500.0 25 0 872010.0 + 25947 NLPDEEIFQQL 11 110 673.3352424362749 1344.6559319393498 2 673.3360473513603 MULTI CID FTMS 0 0 0 20698 3011992.75 1.0 0 0.0 1 Unmodified _NLPDEEIFQQL_ ENSG00000169019|ENST00000381571|COMMD8 107.09958533191995 0.0092526378468096 3 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F}Q[Q{I|L}] 11 4 + 71.894 0.0 0.0 5.3466 5.3466 79.568 0.0 0.0 0.0 3.564028588174736 4.6552517149123815 3.564028588174736 3.564028588174736 0 0.9749073637206092 0.0 1.7912359745699709 0.7302046884880937 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F}Q[Q{I|L}];[HT]CE{I|L}N{I|L}{M(Oxidation (M))|F}Q[Q{I|L}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PE{I|L}N{I|L}{M(Oxidation (M))|F}Q[Q{I|L}];[DP]EE{I|L}N{I|L}{M(Oxidation (M))|F}[AG][Q{I|L}];[DP]EE{I|L}{M(Oxidation (M))|F}QVQ[Q{I|L}];[DP]EE{I|L}{M(Oxidation (M))|F}QQV[Q{I|L}];[DP]EEN{I|L}{I|L}{M(Oxidation (M))|F}Q[Q{I|L}];[HT]CE{I|L}N{I|L}{M(Oxidation (M))|F}[AG][Q{I|L}];[DP]EE{I|L}N{M(Oxidation (M))|F}{I|L}Q[Q{I|L}];{[QN]|[E{I|L}]|[KN]}EDPN{I|L}{M(Oxidation (M))|F}Q[Q{I|L}] 5.3466;5.0816;4.9887;4.6678;4.5509;4.5476;4.4582;4.4027;4.3863;4.3526 -;-;-;-;-;-;-;-;-;- 7382 1 1.806 114689.6 1.0 14805 5892 20698 HBL1_DMSO_200M_050219_1,20699 HBL1_DMSO_200M_050219_1,20699,NLPDEEIFQQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20700 101.22 36.0 3897200.0 25 0 656990.0 + 29740 QPPPPPLWI 9 104 522.7979655352746 1043.581378137349 2 522.7979614138603 MULTI CID FTMS 0 0 0 20698 1321026.25 0.3855015064098566 -2 0.1569976806640625 2 Unmodified _QPPPPPLWI_ ENSG00000135045|ENST00000376854|C9orf40 44.40701690623563 0.0526327925666318 3 [{I|L}P]PPPPQW{I|L} 9 2 + 33.732 0.0 0.0 3.2324 3.2324 76.923 0.0 0.0 0.0 6.953658800671942 7.504311474114338 6.953658800671942 6.953658800671942 0 0.6989700043360187 0.958607314841775 0.0 0.0 [{I|L}P]PPPPQW{I|L};{[HG]|PP}{I|L}PPPQW{I|L};[{I|L}P]PPPGPAW{I|L};[{I|L}P]PPPP[AG]W{I|L};{[HG]|PP}{I|L}PPGPAW{I|L};{[HG]|PP}{I|L}PPP[AG]W{I|L};{[HG]|PP}QPP[{I|L}P]W{I|L};[{I|L}P][YK]PQW{I|L};[{I|L}P]PPQ{[HG]|PP}W{I|L};{[HG]|PP}QP{I|L}{[HG]|PP}W{I|L} 3.2324;2.566;2.4049;2.35;1.7386;1.6837;1.604;1.5605;1.5115;1.3915 -;-;-;-;-;-;-;-;-;- 498 1 1.806 110531.8 1.0 14806 5892 20698 HBL1_DMSO_200M_050219_1,20700 HBL1_DMSO_200M_050219_1,20700,QPPPPPLWI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20701 101.23 430.0 367760.0 25 0 32531.0 -1 0 138 960.4565677771157 1918.898582621031 2 960.4583618044852 MULTI CID FTMS 0 0 0 20698 381781.8125 0.8139501943430645 1 -0.1294631958007812 3 3 V{I|L}[TA]{I|L}Q{I|L}{[QG]|[NA]} 9 -1 48.72 0.0 0.0 2.539 0.0 0.0 977.3562375055998 0.0 977.3562375055998 0.0 4.978975024131927 0.0 0.0 0 0.0 0.0 0.5994850021680094 1.6237125054200234 V{I|L}[TA]{I|L}Q{I|L}{[QG]|[NA]} 2.539 - 5802 + 1 1.806 103751.2 1.0 14807 5892 20698 HBL1_DMSO_200M_050219_1,20701 HBL1_DMSO_200M_050219_1,20701, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20702 101.23 205.0 248690.0 25 0 53970.0 -1 0 61 1167.4924480481477 3499.455514744644 3 1167.499072253704 MULTI CID FTMS 0 0 0 20698 304086.9375 1.0 0 0.0 4 3 E 1 -1 3.9794 0.0 0.0 0.11371 0.0 0.0 2843.224885370391 524.1650484674436 3367.389933837834 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.11371 - 3 + 1 1.806 46271.1 1.0 14808 5892 20698 HBL1_DMSO_200M_050219_1,20702 HBL1_DMSO_200M_050219_1,20702, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20703 101.24 282.0 500150.0 25 0 21931.0 + 43375 WQDWPLTQV 9 130 586.7904900496585 1171.566427166117 2 586.7903320193291 MULTI CID FTMS 0 0 0 20698 253242.375 0.5857644119623576 3 -0.430023193359375 5 Unmodified _WQDWPLTQV_ chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 96.36657018975838 0.0123932121270252 3 [WQ]DWP{I|L}TQV 9 0 + 72.387 0.0 0.0 6.1787 6.1787 82.914 0.0 0.0 0.0 4.194148555349557 7.830145895351848 4.194148555349557 4.194148555349557 0 1.492992819099939 0.0 0.7302046884880938 1.4291746928241125 + + [WQ]DWP{I|L}TQV;[AG]WDWP{I|L}TQV;[WD]QWP{I|L}TQV;[WQ]DPW{I|L}TQV;[NP]MSWP{I|L}TQV;{[QD]|[EN]|[WG]|[KD]|[RS]}WWP{I|L}TQV;[AG]DWWP{I|L}TQV;[AG]WDPW{I|L}TQV;[WQ]DP{I|L}WTQV;[AG]WDP{I|L}WTQV 6.1787;5.8207;5.0659;5.0235;4.9744;4.9592;4.8995;4.7297;4.5058;4.4728 +;-;-;-;-;-;-;-;-;- + 5956 1 1.806 110865.4 1.0 14809 5892 20698 HBL1_DMSO_200M_050219_1,20703 HBL1_DMSO_200M_050219_1,20703,WQDWPLTQV True True WQDWPLTQV 101.24007 586.790332019329 3211705.25 20698.0 nc|ENSG00000132185|Q7L513-10|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-8|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA 8.03659200668335 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20704 101.25 800.0 161540.0 25 0 4359.2 -1 0 129 1155.2862316208525 4617.11582061701 4 1156.283740222454 MULTI CID FTMS 0 0 0 20698 227931.890625 0.7711840832315671 2 -0.2494735717773437 6 3 QY{M(Oxidation (M))|F}ANQQA 8 -1 22.917 0.0 0.0 0.49636 0.0 0.0 3086.463960951483 577.1992281549436 3663.663189106426 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QY{M(Oxidation (M))|F}ANQQA 0.49636 - 792 + 1 1.806 77563.8 0.9399999976158142 14810 5892 20698 HBL1_DMSO_200M_050219_1,20704 HBL1_DMSO_200M_050219_1,20704, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20705 101.26 497.0 369470.0 25 0 45871.0 + 1818 ALTELLAKI 9 156 486.3103788438592 970.6062047545184 2 486.3100463747978 MULTI CID FTMS 0 0 0 20698 220855.40625 0.0064875477455376 25 -2.0717697143554688 7 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 71.92227651296345 0.0203558744033348 3 [{I|L}A]TE{I|L}K{I|L}{I|L}A 9 4 + 82.406 0.0 0.0 8.4902 8.4902 96.47 0.0 0.0 0.0 17.618833609788737 16.478174818886373 16.478174818886373 17.618833609788737 0 2.1237125054200234 2.0 1.035666875892183 0.0 [{I|L}A]TE{I|L}K{I|L}{I|L}A;{[QN]|[E{I|L}]|[KN]}TA{I|L}K{I|L}{I|L}A;[{I|L}A]{I|L}ETK{I|L}{I|L}A;[{I|L}T]EA{I|L}K{I|L}{I|L}A;{[QN]|[E{I|L}]|[KN]}T{I|L}AK{I|L}{I|L}A;[{I|L}T]AE{I|L}K{I|L}{I|L}A;{[ET]|[MV]}{I|L}A{I|L}K{I|L}{I|L}A;[{I|L}T]E{I|L}AK{I|L}{I|L}A;{[ET]|[MV]}{I|L}{I|L}AK{I|L}{I|L}A;{[QN]|[E{I|L}]|[KN]}{I|L}TAK{I|L}{I|L}A 8.4902;6.6749;6.4224;6.4205;6.2637;6.1629;6.1088;6.0093;5.6975;5.3404 -;-;-;-;-;-;-;-;-;- 2516 1 1.806 141211.4 1.0 14811 5892 20698 HBL1_DMSO_200M_050219_1,20705 HBL1_DMSO_200M_050219_1,20705,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20706 101.28 800.0 267810.0 25 0 40964.0 20186 LLAEGITWV 9 148 1001.5669124332394 1000.5596359666392 1 1002.569323718548 MULTI CID FTMS 0 0 0 20698 176386.171875 1.0 0 0.0 8 Unmodified _LLAEGITWV_ ENSG00000143183|ENST00000367881|TMCO1;nc|ENSG00000143183|Q9UM00-2|TMCO1;nc|ENSG00000143183|Q9UM00|TMCO1 50.855029805455786 0.0384952370514206 3 {[QN]|[E{I|L}]|[KN]}Q{I|L}{I|L}T{[RE]|[WV]} 8 4 + 51.767 0.0 0.0 5.1738 5.1738 77.063 0.0 0.0 0.0 9.99934735292561 4.6040937697618745 4.6040937697618745 2.552725051033065 0 0.8494850021680094 2.0 0.8996498648046138 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}Q{I|L}{I|L}T{[RE]|[WV]};{[QN]|[E{I|L}]|[KN]}AG{I|L}{I|L}T{[RE]|[WV]};{[QN]|[E{I|L}]|[KN]}Q{I|L}T{I|L}{[RE]|[WV]};{[QN]|[E{I|L}]|[KN]}A{I|L}G{I|L}T{[RE]|[WV]};{[QN]|[E{I|L}]|[KN]}AG{I|L}T{I|L}{[RE]|[WV]};[{I|L}T]Q{I|L}{I|L}E{[RE]|[WV]};[{I|L}T]Q{I|L}E{I|L}{[RE]|[WV]};{[QN]|[E{I|L}]|[KN]}Q{I|L}TW[{I|L}V];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L}T{[RE]|[WV]};{[QN]|[E{I|L}]|[KN]}AG{I|L}TW[{I|L}V] 5.1738;4.9186;4.518;4.4418;4.2629;4.1744;4.1348;4.119;3.9341;3.8639 -;-;-;-;-;-;-;-;-;- 13306 1 1.806 138372.0 0.8600000143051147 14812 5892 20698 HBL1_DMSO_200M_050219_1,20706 HBL1_DMSO_200M_050219_1,20706,LLAEGITWV True True LLVLMEWV 101.27656 1002.56932371855 2086598.125 20698.0 ENST00000287322.4_2_8:38066567-38066711:+|nuORF -0.0621881286303202 1.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20707 101.28 384.0 439030.0 25 0 31138.0 -1 0 130 803.7582794288605 2408.2530088867816 3 804.0925781130791 MULTI CID FTMS 0 0 0 20698 166590.3125 1.0 0 0.0 9 3 H{I|L}[KC]RGQNT[WM]D{I|L}Y{I|L}AE 17 -1 106.22 0.0 0.0 4.4105 0.0 0.0 0.0 346.1892228634172 346.1892228634172 66.21356498392012 0.0 0.0 0.0 0 3.3494850021680094 1.5228787452803376 0.6747425010840047 0.0 H{I|L}[KC]RGQNT[WM]D{I|L}Y{I|L}AE 4.4105 - 27601 + 1 1.806 120989.8 1.0 14813 5892 20698 HBL1_DMSO_200M_050219_1,20707 HBL1_DMSO_200M_050219_1,20707, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20708 101.29 387.0 368460.0 25 0 52342.0 + 20013 LIMELINNV 9 154 529.7987467816168 1057.5829406300336 2 529.7999145388603 MULTI CID FTMS 0 0 0 20698 172776.546875 0.6050913878125214 2 -0.2494735717773437 10 Unmodified _LIMELINNV_ ENSG00000110955|ENST00000262030|ATP5F1B;ENST00000547250.5_1_12:57033951-57037708:-|nuORF 85.35673624503755 0.0162188719545379 3 {I|L}{I|L}EM{I|L}{I|L}C{I|L} 8 5 55.317 0.0 0.0 5.2305 0.0 0.0 0.0 126.04659964786482 126.04659964786482 35.07255057775032 0.0 0.0 0.0 0 1.0994850021680094 2.0 0.2742275032520141 0.0 {I|L}{I|L}EM{I|L}{I|L}C{I|L} 5.2305 - 2361 1 1.806 118891.3 1.0 14814 5892 20698 HBL1_DMSO_200M_050219_1,20708 HBL1_DMSO_200M_050219_1,20708,LIMELINNV True True LIMELINNV 101.29042 529.79991453886 5602895.0 20698.0 ENSG00000110955|ENST00000262030|ATP5F1B;;ENST00000547250.5_1_12:57033951-57037708:-|nuORF 5.060792446136475 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20709 101.31 800.0 60711.0 25 0 1345.0 -1 0 96 1189.2177852328002 0 1189.550219714642 PEAK CID FTMS 0 0 0 20698 132940.5625 0.3226252138461424 -5 0.3523178100585937 11 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.29413 0.0 0.0 1938.2302349169693 288.099949822114 2226.330184739083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.29413 - 13 + 1 1.806 37020.7 0.800000011920929 14815 5892 20698 HBL1_DMSO_200M_050219_1,20709 HBL1_DMSO_200M_050219_1,20709, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20710 101.31 321.0 248670.0 25 0 37353.0 + 10225 FQLEHIMDL 9 118 573.2863622217212 1144.5581715102423 2 573.2880126833916 MULTI CID FTMS 0 0 0 20698 135818.53125 0.2996782359899234 3 -0.430023193359375 12 Unmodified _FQLEHIMDL_ ENSG00000197102|ENST00000360184|DYNC1H1 62.57269311338072 0.0246576765497938 3 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EH{I|L}MD{I|L} 9 0 + 54.164 0.0 0.0 4.7323 4.7323 84.224 0.0 0.0 0.0 14.360106705664217 9.420080530223132 9.420080530223132 9.420080530223132 0 1.579689690656103 0.721246399047171 1.3352587893338912 0.0 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EH{I|L}MD{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EH{I|L}MEV;[H{I|L}]E{I|L}MD{I|L}Q{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EH{I|L}[DP]{M(Oxidation (M))|F};[H{I|L}]E{I|L}M[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{M(Oxidation (M))|F}V]M{I|L}[{M(Oxidation (M))|F}T]{I|L};[DV]Y{I|L}HE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[YC]|[HE]}{I|L}{I|L}MD{I|L}Q{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}MH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.7323;3.9093;3.628;3.3779;3.3298;3.0463;2.961;2.5604;2.4623;2.3715 +;-;-;-;-;-;-;-;-;- + 1275 + 1 1.806 64197.2 1.0 14816 5892 20698 HBL1_DMSO_200M_050219_1,20710 HBL1_DMSO_200M_050219_1,20710,FQLEHIMDL True True FQLEHIMDL 101.3113 573.288012683392 6184651.0 20698.0 ENSG00000197102|ENST00000360184|DYNC1H1 6.405740896860759 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20711 101.32 221.0 228160.0 25 0 21596.0 + 17889 KQMVGQFLGM 10 96 569.7923723696688 1137.5701918061377 2 569.7862426638603 MULTI CID FTMS 0 0 0 20698 145052.078125 0.0755443424419469 9 -1.122314453125 13 Unmodified _KQMVGQFLGM_ REV__ENSG00000100628|ENST00000555019|ASB2;REV__nc|ENSG00000100628|Q96Q27-1|ASB2 10.823927491677226 0.6659270209832991 3 [YR]W{I|L}V[DV]GM 9 -1 + 29.332 0.0 0.0 2.5784 2.5784 70.497 0.0 0.0 0.0 3.62581753407888 0.0873194583742886 0.0873194583742886 2.727562184969376 0 0.0 0.0 0.0 0.0 [YR]W{I|L}V[DV]GM;[YR]W{I|L}E[Q{I|L}]M;[YR]W{I|L}E[{I|L}A]GM;[YR]{M(Oxidation (M))|F}NA{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L};[YR]{M(Oxidation (M))|F}NA{[MS]|[{M(Oxidation (M))|F}A]}H{I|L};[YR]W{I|L}V[DC]A{I|L};[YR]{M(Oxidation (M))|F}NA{[QS]|[NT]}[RP];[YR]{M(Oxidation (M))|F}GGA{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L};[YR]{M(Oxidation (M))|F}GGA{[MS]|[{M(Oxidation (M))|F}A]}H{I|L};[YR]{M(Oxidation (M))|F}[SG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H{I|L} 2.5784;2.3387;2.204;2.2016;1.988;1.8944;1.502;1.3921;0.87128;0.70023 -;-;-;-;-;-;-;-;-;- 373 + 1 1.806 44482.9 1.0 14817 5892 20698 HBL1_DMSO_200M_050219_1,20711 HBL1_DMSO_200M_050219_1,20711,KQMVGQFLGM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20712 101.33 800.0 79211.0 25 0 12793.0 -1 VVRRRRRRRL 10 104 732.9843669539868 0 733.0257446169853 PEAK CID FTMS 0 0 0 20698 55641.33203125 1.0 0 0.0 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VVRRRRRRRL_ ENST00000554273.1_1_14:50998823-50999316:-|nuORF 0.4007161486938917 0.3961065659209837 3 {M(Oxidation (M))|F}{I|L}{I|L}S 4 -1 15.094 0.0 0.0 1.031 0.0 0.0 694.5459300976235 306.11066614322505 1000.6565962408486 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}{I|L}{I|L}S 1.031 - 128 + 1 1.806 48076.2 0.5199999809265137 14818 5892 20698 HBL1_DMSO_200M_050219_1,20712 HBL1_DMSO_200M_050219_1,20712,VVRRRRRRRL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20713 101.34 568.0 30356.0 25 0 1045.9 -1 0 51 861.4086610712485 3441.605538418594 4 861.4090453982353 MULTI CID FTMS 0 0 0 20698 40109.828125 0.4864062638262781 -1 0.0984115600585937 15 3 E 1 -1 4.6041 0.0 0.0 0.13378 0.0 0.0 2653.0289525805065 656.5279635065061 3309.5569160870127 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.13378 - 10 + 1 1.806 23758.6 1.0 14819 5892 20698 HBL1_DMSO_200M_050219_1,20713 HBL1_DMSO_200M_050219_1,20713, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20714 101.35 367.0 95442.0 25 0 5471.4 -1 0 84 884.4966308474541 0 884.4966308474541 PEAK CID FTMS 0 0 0 -1 0 16 3 DN{M(Oxidation (M))|F}{I|L} 4 -1 5.0371 0.0 0.0 0.28507 0.0 0.0 914.6009754626832 360.13446985416255 1274.7354453168457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DN{M(Oxidation (M))|F}{I|L} 0.28507 - 58 + 1 1.806 31586.3 1.0 14820 5892 20698 HBL1_DMSO_200M_050219_1,20714 HBL1_DMSO_200M_050219_1,20714, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20716 101.35 3.9 23154000.0 25 0 1834700.0 -1 0 94 872.4175932028735 3485.641266945094 4 872.9198486208916 MULTI CID FTMS 0 0 0 20715 23691908.0 1.0 0 0.0 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 37.457 0.0 0.0 1.0746 0.0 0.0 0.0 2445.026617857456 2445.026617857456 -0.9466689260282308 0.0 -0.9466689260282308 0.0 0 0.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.0746 - 343 1 1.794 72596.7 1.0 14821 5893 20715 HBL1_DMSO_200M_050219_1,20716 HBL1_DMSO_200M_050219_1,20716, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20717 101.35 102.0 5676900.0 25 0 293990.0 -1 0 184 1162.8876223461473 3485.641037638642 3 1163.223315417767 MULTI CID FTMS 0 0 0 20715 3086820.25 0.7207777871697352 1 -0.1200103759765625 2 3 V{I|L}MV{I|L}Y{I|L}AEVMT 12 -1 116.06 0.0 0.0 3.3295 0.0 0.0 2104.846971580275 0.0 2104.846971580275 0.0 52.04854254147786 0.0 0.0 0 2.9247425010840047 0.0 0.8494850021680094 0.0 V{I|L}MV{I|L}Y{I|L}AEVMT 3.3295 - 31298 1 1.794 348121.0 1.0 14822 5893 20715 HBL1_DMSO_200M_050219_1,20717 HBL1_DMSO_200M_050219_1,20717, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20718 101.35 9.4 8394700.0 25 0 1097600.0 + 25610 NFPEHIFPAL 10 82 592.8085477936168 1183.6025426540334 2 592.8089477419853 MULTI CID FTMS 0 0 0 20715 6202280.5 0.5684624391361631 -2 0.227874755859375 3 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 40.72490554402381 0.149912226101682 3 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 8 8 57.172 0.0 0.0 4.8303 0.0 0.0 0.0 126.03540979556875 126.03540979556875 30.295452379416755 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7302046884880937 0.7742275032520141 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 4.8303 - 466 + 1 1.794 67862.5 1.0 14823 5893 20715 HBL1_DMSO_200M_050219_1,20718 HBL1_DMSO_200M_050219_1,20718,NFPEHIFPAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20719 101.36 191.0 1114400.0 25 0 61314.0 -1 0 149 847.1560457046531 3384.5950769522124 4 847.6588622927666 MULTI CID FTMS 0 0 0 20715 813774.9375 0.5705035814871915 -2 0.227874755859375 4 3 [YQ]{I|L}H{I|L}NG{I|L}V 9 -1 72.457 0.0 0.0 2.1408 0.0 0.0 0.0 2343.986140546761 2343.986140546761 37.67606240177031 0.0 0.0 0.0 0 2.274227503252014 1.154901959985743 0.0 1.2302046884880935 [YQ]{I|L}H{I|L}NG{I|L}V 2.1408 - 645 + 1 1.794 146931.5 1.0 14824 5893 20715 HBL1_DMSO_200M_050219_1,20719 HBL1_DMSO_200M_050219_1,20719, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20720 101.36 111.0 735330.0 25 0 103340.0 + 36654 TAVESFLTI 9 107 490.7687604328746 979.5229679325494 2 490.7689391970634 MULTI CID FTMS 0 0 0 20715 628420.5 1.0 0 0.0 5 Unmodified _TAVESFLTI_ ENSG00000143653|ENST00000366510|SCCPDH 34.10243960390752 0.1078313939113124 3 [{I|L}T]{I|L}C(Carbamidomethyl (C)){M(Oxidation (M))|F} 5 7 35.814 0.0 0.0 3.6563 0.0 0.0 0.0 342.19939080475746 342.19939080475746 5.180606357151518 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.6861818737241735 0.0 [{I|L}T]{I|L}C(Carbamidomethyl (C)){M(Oxidation (M))|F} 3.6563 - 676 1 1.794 66012.6 1.0 14825 5893 20715 HBL1_DMSO_200M_050219_1,20720 HBL1_DMSO_200M_050219_1,20720,TAVESFLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20721 101.36 99.0 879980.0 25 0 90021.0 + 12063 GQFEELLRL 9 69 552.8065233947348 1103.5984938562694 2 552.8068725466728 MULTI CID FTMS 0 0 0 20715 522183.15625 0.8269571159534173 -1 0.1294631958007812 6 Unmodified _GQFEELLRL_ ENSG00000108010|ENST00000331244|GLRX3 45.69961567697781 0.0497987121815769 3 {[QG]|[NA]}{M(Oxidation (M))|F}EE{I|L}{I|L}R{I|L} 9 0 {[QG]|[NA]} + + 58.352 19.062 10.3 5.2874 5.2874 56.638 0.0 0.0 0.0 0.0 40.28498420811667 0.0 0.0 0 0.8807196863200843 0.0 0.805462187404089 0.3054621874040891 + + {[QG]|[NA]}{M(Oxidation (M))|F}EE{I|L}{I|L}R{I|L} 5.2874 + + 233 + 1 1.794 71717.4 1.0 14826 5893 20715 HBL1_DMSO_200M_050219_1,20721 HBL1_DMSO_200M_050219_1,20721,GQFEELLRL True True GQFEELLRL 101.36308 552.806872546673 10207193.0 20715.0 ENSG00000108010|ENST00000331244|GLRX3 7.0344804128011065 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20722 101.37 315.0 644880.0 25 0 40195.0 + 5912 DPYPLLVV 8 143 915.51866070639 914.51138423979 1 915.5192138552666 MULTI CID FTMS 0 0 0 20715 422704.03125 0.1925459558446728 10 -1.2193450927734375 7 Unmodified _DPYPLLVV_ ENSG00000120137|ENST00000239231|PANK3 86.12129899796855 0.0650563179454676 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DP{I|L}{I|L}VV 8 2 + 71.383 0.0 0.0 7.8056 7.8056 82.64 0.0 0.0 0.0 1.106668181871143 16.40978057358332 1.106668181871143 1.106668181871143 0 1.0176452685714268 1.2218487496163564 1.1643943297944483 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DP{I|L}{I|L}VV;[{I|L}P]{I|L}D{M(Oxidation (M))|F}{I|L}VV;[DP]YP{I|L}{I|L}VV;[{I|L}P]{I|L}{M(Oxidation (M))|F}D{I|L}VV;[{I|L}P]{M(Oxidation (M))|F}D{I|L}{I|L}VV;[{I|L}P]D{M(Oxidation (M))|F}{I|L}{I|L}VV;[{I|L}P]D{I|L}{M(Oxidation (M))|F}{I|L}VV;[{I|L}P]YPD{I|L}VV;[{I|L}P]{M(Oxidation (M))|F}{I|L}D{I|L}VV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}{I|L}VV 7.8056;7.6846;7.6502;7.3554;6.83;6.83;6.7605;6.5911;6.4313;6.3083 -;-;+;-;-;-;-;-;-;- + 1835 1 1.794 133442.8 1.0 14827 5893 20715 HBL1_DMSO_200M_050219_1,20722 HBL1_DMSO_200M_050219_1,20722,DPYPLLVV True True DPYPLLVV 101.36884 915.519213855267 37576064.0 20715.0 ENSG00000120137|ENST00000239231|PANK3 6.83682902654012 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20723 101.37 138.0 724670.0 25 0 180630.0 + 41769 VPVEQVLLI 9 95 505.3182480458437 1008.6219431584874 2 505.3186523318291 MULTI CID FTMS 0 0 0 20715 390020.4375 0.7762449402117471 -1 0.1294631958007812 8 Unmodified _VPVEQVLLI_ ENSG00000146410|ENST00000420702|MTFR2 37.97399986684836 0.0865783450051559 3 [VP]EQVV{I|L}{I|L}{I|L} 9 2 + 54.52 0.0 0.0 5.4054 5.4054 78.742 0.0 0.0 0.0 3.15991197430526 7.147642715192504 3.15991197430526 3.0102999566398125 0 0.5 1.0457574905606752 0.2742275032520141 0.2887254899964357 [VP]EQVV{I|L}{I|L}{I|L};[VP]EQV{I|L}V{I|L}{I|L};[{I|L}A][DG]PVV{I|L}{I|L}{I|L};[VP]EVQV{I|L}{I|L}{I|L};[{I|L}A][DG]PV{I|L}V{I|L}{I|L};[VP]EVQ{I|L}V{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VPVV{I|L}{I|L}{I|L};[VP]E[AG]VV{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EPVV{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VPV{I|L}V{I|L}{I|L} 5.4054;5.107;5.0921;4.9324;4.7937;4.6339;4.3246;4.2062;4.1846;4.0261 -;-;-;-;-;-;-;-;-;- 960 1 1.794 84396.8 1.0 14828 5893 20715 HBL1_DMSO_200M_050219_1,20723 HBL1_DMSO_200M_050219_1,20723,VPVEQVLLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20724 101.38 205.0 472930.0 25 0 110810.0 + 10123 FPWPKVLKI 9 88 376.570766370445 1126.6904697115351 3 376.5705444216728 MULTI CID FTMS 0 0 0 20715 374149.78125 0.8334545516816888 5 -0.5862655639648438 9 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 29.84058131909904 0.1515068451768857 3 {I|L}WPE 4 7 25.662 0.0 0.0 2.2776 0.0 0.0 583.407156818041 0.0 583.407156818041 0.0 3.26606256887672 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}WPE 2.2776 - 131 1 1.794 85155.2 1.0 14829 5893 20715 HBL1_DMSO_200M_050219_1,20724 HBL1_DMSO_200M_050219_1,20724,FPWPKVLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20725 101.38 137.0 469130.0 25 0 121230.0 12374 GTFLWGIIL 9 72 510.3014963088324 1018.5884396844648 2 510.3016235232353 MULTI CID FTMS 0 0 0 20715 356929.28125 0.1410939781156249 4 -0.42523193359375 10 Unmodified _GTFLWGIIL_ ENST00000393800.6_2_11:68382148-68382592:+|nuORF 21.74664581756881 0.2544899275067181 3 {I|L}KPM{I|L}{I|L} 6 6 36.599 0.0 0.0 3.5931 0.0 0.0 305.13813979316564 0.0 305.13813979316564 0.0 21.11432819416656 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 {I|L}KPM{I|L}{I|L} 3.5931 - 85 1 1.794 55872.1 1.0 14830 5893 20715 HBL1_DMSO_200M_050219_1,20725 HBL1_DMSO_200M_050219_1,20725,GTFLWGIIL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20726 101.38 247.0 482540.0 25 0 50876.0 + 21672 LPLLVRVI 8 84 461.826006824906 921.637460716612 2 461.8262512087822 MULTI CID FTMS 0 0 0 20715 315390.625 0.9052934348218776 4 -0.42523193359375 11 Unmodified _LPLLVRVI_ ENSG00000065150|ENST00000651721|IPO5;ENST00000468620.1_1_13:98670849-98672064:+|nuORF;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5 38.15118350030904 0.2652218139009398 3 {I|L}P{I|L}{I|L}V[RV]{I|L} 8 0 + 68.849 0.0 0.0 7.4703 7.4703 84.031 0.0 0.0 0.0 32.90730039024169 2.430380486862944 2.430380486862944 2.430380486862944 0 0.8494850021680094 2.0 0.0 0.0 + + {I|L}P{I|L}{I|L}V[RV]{I|L};{I|L}P{I|L}{I|L}V[R{I|L}]V;{I|L}P{I|L}{I|L}[R{I|L}]VV 7.4703;7.2066;6.88 +;-;- + 76 + 1 1.794 95807.5 1.0 14831 5893 20715 HBL1_DMSO_200M_050219_1,20726 HBL1_DMSO_200M_050219_1,20726,LPLLVRVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20727 101.39 326.0 404330.0 25 0 40833.0 + 29555 QLPNFAFSV 9 109 1022.5289775470268 1021.5217010804269 1 1022.525927722454 MULTI CID FTMS 0 0 0 20715 223847.34375 1.0 0 0.0 12 Unmodified _QLPNFAFSV_ ENSG00000141002|ENST00000263346|TCF25;ENST00000563636.5_1_16:89961526-89967207:+|nuORF;ENST00000570116.6_1_16:89962405-89970614:+|nuORF 114.6490535036381 0.0036024293994099 3 [NP]{M(Oxidation (M))|F}AG{I|L}A{M(Oxidation (M))|F}SV 10 5 + 75.588 0.0 0.0 7.3996 7.3996 87.165 0.0 0.0 0.0 4.765879904470069 14.58674701179433 4.765879904470069 4.765879904470069 0 0.3494850021680094 0.0 0.4247425010840047 2.0501648626366045 [NP]{M(Oxidation (M))|F}AG{I|L}A{M(Oxidation (M))|F}SV;[{I|L}P]QN{M(Oxidation (M))|F}A{M(Oxidation (M))|F}SV;[Q{I|L}]PN{M(Oxidation (M))|F}A{M(Oxidation (M))|F}SV;[NP]{M(Oxidation (M))|F}AGA{I|L}{M(Oxidation (M))|F}SV;[NP]{M(Oxidation (M))|F}AQ{I|L}{M(Oxidation (M))|F}SV;[NP]{M(Oxidation (M))|F}Q{I|L}A{M(Oxidation (M))|F}SV;[NP]{M(Oxidation (M))|F}A{M(Oxidation (M))|F}Q{I|L}SV;[{I|L}P]QGG{M(Oxidation (M))|F}A{M(Oxidation (M))|F}SV;[{I|L}P][AG]N{M(Oxidation (M))|F}A{M(Oxidation (M))|F}SV;[Q{I|L}]PGG{M(Oxidation (M))|F}A{M(Oxidation (M))|F}SV 7.3996;6.933;6.795;6.7377;6.5653;6.4775;6.3111;6.0316;6.0316;5.8936 -;-;+;-;-;-;-;-;-;- + 1286 1 1.794 87720.0 1.0 14832 5893 20715 HBL1_DMSO_200M_050219_1,20727 HBL1_DMSO_200M_050219_1,20727,QLPNFAFSV True True QLPNFAFSV 101.38886 1022.52592772245 2437735.0 20715.0 ENSG00000141002|ENST00000263346|TCF25;;ENST00000570116.6_1_16:89962405-89970614:+|nuORF;;ENST00000563636.5_1_16:89961526-89967207:+|nuORF 8.404005209604898 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20728 101.39 233.0 343860.0 25 0 20114.0 + 10131 FPWPKVLKI 9 86 564.3527799952674 1126.691007057335 2 564.3522216677666 MULTI CID FTMS 0 0 0 20715 215454.515625 0.6798304975445602 4 -0.42523193359375 13 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 55.50274090549119 0.0285720310785888 3 {I|L}MWPKV{I|L}K{I|L} 9 2 + 69.039 0.0 0.0 6.1276 6.1276 90.649 0.0 0.0 0.0 31.977437731477416 12.403405327429413 12.403405327429413 16.989700043360187 0 1.1237125054200234 2.0 0.0 0.0 {I|L}MWPKV{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}K{I|L};{I|L}[YV]K{I|L}[HN]K{I|L};{I|L}[YV]K[HN]{I|L}K{I|L} 6.1276;4.6197;2.5627;2.0962 -;+;-;- + 364 + 1 1.794 72387.6 1.0 14833 5893 20715 HBL1_DMSO_200M_050219_1,20728 HBL1_DMSO_200M_050219_1,20728,FPWPKVLKI True True FPWPKVLKI 101.39324 564.352221667767 29552079.0 20715.0 nc|ENSG00000159023|P11171-5|EPB41;;nc|ENSG00000159023|P11171-2|EPB41;;ENSG00000159023|ENST00000343067|EPB41;;nc|ENSG00000159023|P11171-3|EPB41;;nc|ENSG00000159023|P11171-4|EPB41;;nc|ENSG00000159023|P11171-6|EPB41;;nc|ENSG00000159023|P11171-7|EPB41 6.268050352732341 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20729 101.4 253.0 413570.0 25 0 31095.0 + 21709 LPLSGVPLMI 10 130 528.3118322160867 1054.609111498973 2 528.3124267458916 MULTI CID FTMS 0 0 0 20715 200164.53125 0.9487299689990684 -1 0.1294631958007812 14 Oxidation (M) _LPLSGVPLM(Oxidation (M))I_ ENSG00000164611|ENST00000352433|PTTG1;ENSG00000250254|ENST00000504686|PTTG2;ENST00000519287.1_1_5:159849240-159855685:+|nuORF;nc|ENSG00000250254|Q9NZH5|PTTG2 48.345845343767074 0.089859443182303 3 {[TV]|[{I|L}S]}PGV{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 10 4 + 64.522 0.0 0.0 6.1181 6.1181 79.753 0.0 0.0 0.0 2.218487496163561 0.7918124604762511 0.7918124604762511 2.218487496163561 0 0.8807196863200843 2.0 0.8882104921644451 0.0 {[TV]|[{I|L}S]}PGV{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]SGV{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}PG{I|L}VP{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}[VG]P{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]SG{I|L}VP{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[VP]TGV{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]TAA{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]A[TA]{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]TRVP{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}P[R{I|L}]P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 6.1181;5.9077;5.0567;4.966;4.8464;4.766;4.7556;4.5695;4.5674;4.317 -;-;-;-;-;-;-;-;-;- 1624 1 1.794 86748.2 1.0 14834 5893 20715 HBL1_DMSO_200M_050219_1,20729 HBL1_DMSO_200M_050219_1,20729,LPLSGVPLMI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20730 101.41 800.0 124140.0 25 0 1566.4 -1 0 94 868.6634343055133 3470.624631355653 4 868.9150268435478 MULTI CID FTMS 0 0 0 20715 178922.3125 1.0 0 0.0 15 3 [YQ]G 3 -1 13.901 0.0 0.0 0.40053 0.0 0.0 0.0 3119.4552642504373 3119.4552642504373 8.4163750790475 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [YQ]G 0.40053 - 52 1 1.794 68368.3 0.75 14835 5893 20715 HBL1_DMSO_200M_050219_1,20730 HBL1_DMSO_200M_050219_1,20730, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20731 101.42 345.0 285070.0 25 0 25965.0 + -1 RLLEVPVML 9 102 535.3263947473794 1068.6382365615586 2 535.3263427615166 MULTI CID FTMS 0 0 0 20715 163604.03125 1.0 0 0.0 16 Oxidation (M) _PVLPM(Oxidation (M))KKQL_ ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2 18.13498045792455 0.3457906370836843 3 {I|L}{I|L}{[RE]|[WV]}VPVM{I|L} 9 -1 + 63.478 0.0 0.0 5.94 5.94 76.586 0.0 0.0 0.0 0.5799194697768684 16.478174818886373 0.5799194697768684 0.5799194697768684 0 1.305462187404089 1.6989700043360187 0.0 0.0 {I|L}{I|L}{[RE]|[WV]}VPVM{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]VPVM{I|L};[Q{I|L}]Q[K{I|L}]PVM{I|L};[Q{I|L}][AG][K{I|L}]PVM{I|L};[YV]VP[K{I|L}][HT]{I|L};[PS][KG][K{I|L}]PVM{I|L} 5.94;5.8858;3.8495;2.9878;2.6051;2.4506 -;-;-;-;-;- 158 1 1.794 81510.4 1.0 14836 5893 20715 HBL1_DMSO_200M_050219_1,20731 HBL1_DMSO_200M_050219_1,20731,PVLPMKKQL False False RLLEVPVML 101.41922 535.326342761517 1483135.125 20715.0 ENST00000591718.1_1_19:55966993-55972941:-|nuORF;;ENSG00000063241|ENST00000425675|ISOC2;;nc|ENSG00000063241|Q96AB3-2|ISOC2 4.718680222829183 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20732 101.43 605.0 276650.0 25 0 29360.0 -1 GGNGDCDC 8 128 427.6219732503518 853.2293935675036 2 427.6223632693291 MULTI CID FTMS 0 0 0 20715 145129.4375 0.7249507816553723 -1 0.1294631958007812 17 2 Carbamidomethyl (C) _GGNGDC(Carbamidomethyl (C))DC(Carbamidomethyl (C))_ ENSG00000115221|ENST00000283249|ITGB6 0.0 0.8243325171867699 3 {[CP]|[EA]}S 3 -1 14.947 0.0 0.0 1.7518 0.0 0.0 0.0 563.1120598345126 563.1120598345126 4.351342910370894 0.0 0.0 0.0 0 0.75 0.0 0.0 0.0 {[CP]|[EA]}S 1.7518 - 38 + 1 1.794 134637.0 1.0 14837 5893 20715 HBL1_DMSO_200M_050219_1,20732 HBL1_DMSO_200M_050219_1,20732,GGNGDCDC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20733 101.44 634.0 176450.0 25 0 21815.0 + 2732 ATIEDILFKA 10 135 560.8159062027862 1119.6172594723723 2 560.8164550662041 MULTI CID FTMS 0 0 0 20715 143974.640625 0.0865403579765344 4 -0.42523193359375 18 Unmodified _ATIEDILFKA_ ENSG00000145736|ENST00000274400|GTF2H2;ENSG00000183474|ENST00000380729|GTF2H2C;ENST00000502619.5_1_5:68860950-68874677:+|nuORF;ENST00000507549.7_1_5:69716099-69717567:+|nuORF;ENST00000508065.7_1_5:69716099-69743177:+|nuORF;ENST00000508325.5_1_5:68860950-68862940:+|nuORF;ENST00000521942.5_1_5:70344502-70358599:-|nuORF;ENST00000522654.5_1_5:70344846-70358599:-|nuORF;ENST00000523003.5_1_5:70351153-70358599:-|nuORF 70.33199760932243 0.018925923965799 3 [TA]{I|L}ED{I|L}{I|L}{M(Oxidation (M))|F}[KA] 10 0 + 76.604 0.0 0.0 6.842 6.842 93.011 0.0 0.0 0.0 32.61439372640169 10.324609153403514 10.324609153403514 17.618282205331326 0 0.9916440611282626 1.6989700043360187 0.4247425010840047 0.3054621874040891 + + [TA]{I|L}ED{I|L}{I|L}{M(Oxidation (M))|F}[KA];[PG]{I|L}P{I|L}{I|L}DE{I|L}[PG];[{I|L}P]GP{I|L}{I|L}DE{I|L}[PG];[VP]AP{I|L}{I|L}DE{I|L}[PG];[PA]VP{I|L}{I|L}DE{I|L}[PG];{[QN]|[E{I|L}]|[KN]}D{I|L}[PG][{I|L}P]{I|L}[PG];{NN|[MP]|[D{I|L}]|[EV]}E{I|L}[PG][{I|L}P]{I|L}[PG];{[QN]|[E{I|L}]|[KN]}VE[PG][{I|L}P]{I|L}[PG];{[QN]|[E{I|L}]|[KN]}D[PG]{I|L}[{I|L}P]{I|L}[PG];{NN|[MP]|[D{I|L}]|[EV]}{I|L}E[PG][{I|L}P]{I|L}[PG] 6.842;5.2684;4.5337;4.44;4.2712;3.5353;3.15;2.8186;2.707;2.4333 +;-;-;-;-;-;-;-;-;- + 1264 + 1 1.794 88837.0 1.0 14838 5893 20715 HBL1_DMSO_200M_050219_1,20733 HBL1_DMSO_200M_050219_1,20733,ATIEDILFKA True True ATIEDILFKA 101.44085 560.816455066204 20720660.0 20715.0 ENST00000521942.5_1_5:70344502-70358599:-|nuORF;;ENST00000508325.5_1_5:68860950-68862940:+|nuORF;;ENST00000507549.7_1_5:69716099-69717567:+|nuORF;;ENST00000502619.5_1_5:68860950-68874677:+|nuORF;;ENST00000523003.5_1_5:70351153-70358599:-|nuORF;;ENSG00000183474|ENST00000380729|GTF2H2C;;ENSG00000145736|ENST00000274400|GTF2H2;;ENST00000508065.7_1_5:69716099-69743177:+|nuORF;;ENST00000522654.5_1_5:70344846-70358599:-|nuORF 7.418495972951253 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20734 101.45 644.0 227210.0 25 0 17045.0 + 37399 TLAKYLMEL 9 140 541.3008786965996 1080.5872044599992 2 541.8029662966728 MULTI CID FTMS 0 0 0 20715 121676.1015625 0.8057371312615769 1 -0.1200103759765625 19 Unmodified _TLAKYLMEL_ ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1 27.628801355627647 0.1796483985696185 3 {[QN]|[E{I|L}]|[KN]}H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VK 7 7 30.877 0.0 0.0 2.8574 0.0 0.0 0.0 210.10292646611163 210.10292646611163 1.7790323204948066 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}H{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VK 2.8574 - 1150 1 1.794 118890.1 1.0 14839 5893 20715 HBL1_DMSO_200M_050219_1,20734 HBL1_DMSO_200M_050219_1,20734,TLAKYLMEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20735 101.47 800.0 132580.0 25 0 25997.0 -1 0 99 1082.4956811069792 0 1082.540820300579 PEAK CID FTMS 0 0 0 -1 0 20 3 R 1 -1 4.6041 0.0 0.0 0.21286 0.0 0.0 1099.4584509817334 904.4096773736936 2003.868128355427 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.21286 - 14 + 1 1.794 68041.3 0.6299999952316284 14840 5893 20715 HBL1_DMSO_200M_050219_1,20735 HBL1_DMSO_200M_050219_1,20735, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20737 101.47 211.0 813550.0 25 0 55834.0 -1 0 115 698.135186505527 3485.639550194635 5 698.5370971560478 MULTI CID FTMS 0 0 0 20736 487281.46875 0.8502392533907044 1 -0.1805496215820312 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 50.952 0.0 0.0 1.4618 0.0 0.0 0.0 2445.0225504522327 2445.0225504522327 10.157942671832316 0.0 0.0 0.0 0 0.0 0.0 1.2614393726401687 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.4618 - 3161 1 1.781 130492.3 1.0 14841 5894 20736 HBL1_DMSO_200M_050219_1,20737 HBL1_DMSO_200M_050219_1,20737, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20738 101.48 534.0 299380.0 25 0 13109.0 + 1227 AIIGGMFTV 9 113 908.4907164664388 907.4834399998388 1 908.4935180544852 MULTI CID FTMS 0 0 0 20736 210335.625 0.0422293702404638 11 -1.3269882202148438 2 Unmodified _AIIGGMFTV_ ENSG00000125991|ENST00000348547|ERGIC3;ENST00000488384.1_1_20:34144716-34145272:+|nuORF;nc|ENSG00000125991|Q9Y282-3|ERGIC3 114.943777797906 0.0034891922099073 3 [Q{I|L}]GM{I|L}{M(Oxidation (M))|F}TV 8 4 + 50.75 0.0 0.0 5.5924 5.5924 75.442 0.0 0.0 0.0 1.1394335230683694 2.7686987874962554 1.1394335230683694 0.6137816695353777 0 0.8807196863200843 0.0 0.3807196863200844 0.0 [Q{I|L}]GM{I|L}{M(Oxidation (M))|F}TV;[Q{I|L}]G{I|L}M{M(Oxidation (M))|F}TV;[Q{I|L}]GM{M(Oxidation (M))|F}{I|L}TV;{[QV]|[N{I|L}]|[RA]|[KV]}AM{I|L}{M(Oxidation (M))|F}TV;{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}M{M(Oxidation (M))|F}TV;{[QV]|[N{I|L}]|[RA]|[KV]}AM{M(Oxidation (M))|F}{I|L}TV;[{I|L}A]{I|L}NM{M(Oxidation (M))|F}TV;[MN]{I|L}A{I|L}{M(Oxidation (M))|F}TV;[MN]A{I|L}{I|L}{M(Oxidation (M))|F}TV;[MN]{I|L}A{M(Oxidation (M))|F}{I|L}TV 5.5924;5.5248;5.5046;5.4669;5.3992;5.3791;5.2873;5.0667;4.9929;4.9789 -;-;-;-;-;-;-;-;-;- 1843 1 1.781 111876.5 1.0 14842 5894 20736 HBL1_DMSO_200M_050219_1,20738 HBL1_DMSO_200M_050219_1,20738,AIIGGMFTV True False AIIGGMFTV 101.48401 908.493518054485 107389432.0 20736.0 ENST00000488384.1_1_20:34144716-34145272:+|nuORF;;nc|ENSG00000125991|Q9Y282-3|ERGIC3;;ENSG00000125991|ENST00000348547|ERGIC3 7.906073252360026 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20739 101.49 138.0 567850.0 25 0 112350.0 + 5027 DGWKFEQLI 9 91 568.2928369481688 1134.5711209631374 2 568.2933227419853 MULTI CID FTMS 0 0 0 20736 393344.6875 0.7544831308355867 -1 0.1200103759765625 3 Unmodified _DGWKFEQLI_ ENSG00000180901|ENST00000322444|KCTD2 51.629811660486645 0.0367964933207742 3 [DG]WK{M(Oxidation (M))|F}EQ{I|L}{I|L} 9 0 + 71.107 0.0 0.0 6.2673 6.2673 78.921 0.0 0.0 0.0 1.4176089524325874 16.478174818886373 1.4176089524325874 1.4176089524325874 0 0.9247425010840048 0.958607314841775 1.360924374808178 0.3494850021680094 + + [DG]WK{M(Oxidation (M))|F}EQ{I|L}{I|L};[{I|L}P][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}EQ{I|L}{I|L};[DG]WKE{M(Oxidation (M))|F}Q{I|L}{I|L};[{I|L}P][{M(Oxidation (M))|F}E]E{M(Oxidation (M))|F}Q{I|L}{I|L};[DG]WK{M(Oxidation (M))|F}QE{I|L}{I|L};[DG]WK{M(Oxidation (M))|F}E[AG]{I|L}{I|L};[{I|L}P][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}QE{I|L}{I|L};[DG]WKE{M(Oxidation (M))|F}[AG]{I|L}{I|L};[{M(Oxidation (M))|F}E]QKWGD{I|L}{I|L};[{I|L}P][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}E[AG]{I|L}{I|L} 6.2673;6.1424;5.8856;5.7606;5.4713;5.4557;5.3464;5.074;5.0709;5.0227 +;-;-;-;-;-;-;-;-;- + 615 1 1.781 65299.3 1.0 14843 5894 20736 HBL1_DMSO_200M_050219_1,20739 HBL1_DMSO_200M_050219_1,20739,DGWKFEQLI True True DGWKFEQLI 101.48681 568.293322741985 4381920.0 20736.0 ENSG00000180901|ENST00000322444|KCTD2 1.4082794189453125 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20740 101.49 170.0 502870.0 25 0 30125.0 + -1 GGQYPSDNPGM 11 120 569.7256832702752 1137.4368136073504 2 569.7258788943291 MULTI CID FTMS 0 0 0 20736 354749.0625 0.5928163750603288 -1 0.1200103759765625 4 Oxidation (M) _GGQYPSDNPGM(Oxidation (M))_ REV__ENSG00000078967|ENST00000222402|UBE2D4;REV__ENSG00000109332|ENST00000453744|UBE2D3;REV__ENSG00000131508|ENST00000398733|UBE2D2;REV__ENST00000440899.5_1_7:43978041-43988321:+|nuORF;REV__ENST00000503742.5_1_4:103723687-103747665:-|nuORF;REV__ENST00000511691.1_1_5:138980019-139003047:+|nuORF;REV__nc|ENSG00000109332|P61077-2|UBE2D3;REV__nc|ENSG00000109332|P61077-3|UBE2D3;REV__nc|ENSG00000131508|P62837-2|UBE2D2 21.53697664764585 0.586507868110548 3 {M(Oxidation (M))|F}H{I|L} 3 -1 21.994 0.0 0.0 1.9337 0.0 0.0 722.2142316755129 0.0 722.2142316755129 0.0 0.4455341612370134 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}H{I|L} 1.9337 - 183 + 1 1.781 68070.5 1.0 14844 5894 20736 HBL1_DMSO_200M_050219_1,20740 HBL1_DMSO_200M_050219_1,20740,GGQYPSDNPGM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20741 101.49 205.0 495280.0 25 0 61761.0 + 17089 KLFDDMMYEL 10 97 652.7982757779899 1303.5819986227798 2 652.7988159060478 MULTI CID FTMS 0 0 0 20736 344196.09375 0.3648560686365443 -1 0.1200103759765625 5 Unmodified _KLFDDMMYEL_ ENSG00000000460|ENST00000359326|C1orf112 59.36838082759317 0.0382430275470746 3 [YE]{I|L}{[NV]|[RG]}MMYE{I|L} 10 5 + 76.814 0.0 0.0 5.8925 5.8925 86.481 0.0 0.0 0.0 6.178542585111941 48.44666892602824 6.178542585111941 9.018637558036673 0 0.75 1.5228787452803376 1.5669015600442575 0.0 [YE]{I|L}{[NV]|[RG]}MMYE{I|L};[YE]{I|L}{[NV]|[RG]}D{M(Oxidation (M))|F}YE{I|L};{[QN]|[E{I|L}]|[KN]}Y{[NV]|[RG]}MMYE{I|L};[YE]M[TP]KMYE{I|L};{[QN]|[E{I|L}]|[KN]}Y{[NV]|[RG]}D{M(Oxidation (M))|F}YE{I|L};[YE]MG[RP]{M(Oxidation (M))|F}YE{I|L};[MD]D{M(Oxidation (M))|F}{I|L}KMYE{I|L};[YE]{I|L}{[NV]|[RG]}DEY{M(Oxidation (M))|F}{I|L};[YE][WP]{[SA]|[TG]}{M(Oxidation (M))|F}YE{I|L};[YE]{I|L}{[NV]|[RG]}M[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}{I|L} 5.8925;5.2007;5.1896;5.0779;4.4977;4.3861;4.3108;3.6351;3.5891;3.4854 -;-;-;-;-;-;-;-;-;- 979 1 1.781 83195.9 1.0 14845 5894 20736 HBL1_DMSO_200M_050219_1,20741 HBL1_DMSO_200M_050219_1,20741,KLFDDMMYEL True True KLFDDMMYEL 101.49407 652.798815906048 13185215.0 20736.0 ENSG00000000460|ENST00000359326|C1orf112 8.313347816467285 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20742 101.51 800.0 234790.0 25 0 11511.0 -1 0 136 1129.2048186317706 3384.5926264955124 3 1130.205371081829 MULTI CID FTMS 0 0 0 20736 168223.96875 1.0 0 0.0 6 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 34.245 0.0 0.0 1.0118 0.0 0.0 0.0 2443.0438953766243 2443.0438953766243 5.828956512079344 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.0118 - 827 1 1.781 118633.5 0.7400000095367432 14846 5894 20736 HBL1_DMSO_200M_050219_1,20742 HBL1_DMSO_200M_050219_1,20742, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20743 101.52 503.0 322550.0 25 0 29746.0 + 45613 YVLDINSIDNL 11 131 639.8323407677024 1277.6501286022046 2 639.8322631716728 MULTI CID FTMS 0 0 0 20736 166440.546875 0.1802563024416599 -1 0.1200103759765625 7 Unmodified _YVLDINSIDNL_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 89.40071534611396 0.0006776708238028 3 [YV]{I|L}D{I|L}NS{I|L}DN{I|L} 11 0 + 76.711 0.0 0.0 6.0041 6.0041 81.651 0.0 0.0 0.0 7.414699943371787 15.859860107723634 7.414699943371787 3.5218251811136128 0 0.7766674625743032 2.0 0.6861818737241735 1.1861818737241734 + + [YV]{I|L}D{I|L}NS{I|L}DN{I|L};[YV]EV{I|L}NS{I|L}DN{I|L};{NN|[MP]|[D{I|L}]|[EV]}YV{I|L}NS{I|L}DN{I|L};{NN|[MP]|[D{I|L}]|[EV]}VY{I|L}NS{I|L}DN{I|L};[YV]{I|L}EVNS{I|L}DN{I|L};[YV]{I|L}DN{I|L}S{I|L}DN{I|L};{NN|[MP]|[D{I|L}]|[EV]}NS{I|L}[YV]{I|L}DN{I|L};[YV]E{I|L}VNS{I|L}DN{I|L};[YV]EVN{I|L}S{I|L}DN{I|L};{[TV]|[{I|L}S]}ND{I|L}[YV]{I|L}DN{I|L} 6.0041;5.7284;5.4237;5.3879;5.2973;5.138;5.0582;5.0216;4.8624;4.8513 +;-;-;-;-;-;-;-;-;- + 7725 1 1.781 129984.3 1.0 14847 5894 20736 HBL1_DMSO_200M_050219_1,20743 HBL1_DMSO_200M_050219_1,20743,YVLDINSIDNL True True YVLDINSIDNL 101.51681 639.832263171673 10341479.0 20736.0 ENSG00000137959|ENST00000370751|IFI44L;;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 6.036215623219808 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20744 101.52 257.0 500170.0 25 0 102550.0 34107 SLLPNIYVL 9 104 516.3126076098428 0 516.3136474490166 PEAK CID FTMS 0 0 0 20736 179708.78125 1.0 0 0.0 8 Unmodified _SLLPNIYVL_ ENST00000302503.7_1_11:47640451-47647231:-|nuORF 21.74664581756881 0.185237546287679 3 T{I|L}D 3 8 20.445 0.0 0.0 1.9838 0.0 0.0 99.07120320279098 599.3584879790247 698.4296911818158 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 T{I|L}D 1.9838 - 170 + 1 1.781 101613.5 1.0 14848 5894 20736 HBL1_DMSO_200M_050219_1,20744 HBL1_DMSO_200M_050219_1,20744,SLLPNIYVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20745 101.53 389.0 287050.0 25 0 25052.0 + 17190 KLLDIPGLEV 10 123 548.8346708683332 1095.6547888034663 2 548.8353759646416 MULTI CID FTMS 0 0 0 20736 160887.3125 1.0 0 0.0 9 Unmodified _KLLDIPGLEV_ ENSG00000138621|ENST00000342932|PPCDC;ENST00000568207.5_1_15:75315958-75337059:+|nuORF 51.41523569358685 0.0718446036348414 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}[PG]{I|L}EV 10 2 + 72.816 0.0 0.0 6.6459 6.6459 83.754 0.0 0.0 0.0 11.8075734006554 16.53212513775344 11.8075734006554 3.563696562846701 0 1.110924374808178 1.0 1.1071892873599445 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}[PG]{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}APVK{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}K[PG]{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}K[PG]{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}VK{I|L}[PG]{I|L}EV;{[VA]|[{I|L}G]}PEVK{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}[PG]E{I|L}V;[{I|L}P]GEVK{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}GPVK{I|L}{I|L}EV;{[VA]|[{I|L}G]}EPVK{I|L}{I|L}EV 6.6459;6.3206;5.7489;5.7087;5.5682;5.5532;5.4905;5.4543;5.243;5.19 -;-;-;-;-;-;-;-;-;- 2057 1 1.781 91813.4 1.0 14849 5894 20736 HBL1_DMSO_200M_050219_1,20745 HBL1_DMSO_200M_050219_1,20745,KLLDIPGLEV True True KLLDIPGLEV 101.52858 548.835375964642 1647324.0 20736.0 ENST00000568207.5_1_15:75315958-75337059:+|nuORF;;ENSG00000138621|ENST00000342932|PPCDC 5.998118082682292 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20746 101.54 477.0 255140.0 25 0 31094.0 + 16053 ITLEDLEQL 9 141 537.2900438516225 0 537.2902099490166 PEAK CID FTMS 0 0 0 20736 157313.25 1.0 0 0.0 10 Unmodified _ITLEDLEQL_ ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15 77.98433622928108 0.0163619645899818 3 E{I|L}{I|L}TD 5 7 48.078 0.0 0.0 4.4825 0.0 0.0 259.1555749085199 239.1044863336547 498.2600612421746 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 1.873712505420024 0.0 E{I|L}{I|L}TD 4.4825 - 1337 + 1 1.781 102329.3 1.0 14850 5894 20736 HBL1_DMSO_200M_050219_1,20746 HBL1_DMSO_200M_050219_1,20746,ITLEDLEQL True True ELSELIEQL 101.5382 537.290209949017 1600696.875 20736.0 ENSG00000118898|ENST00000345988|PPL 0.4464791615804036 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20747 101.54 296.0 308930.0 25 0 44839.0 + + 15903 TVFDLPKFSV 10 103 576.3110368533369 1150.6075207734737 2 576.8157836794853 MULTI CID FTMS 0 0 0 20736 152502.34375 1.0 0 0.0 11 Unmodified _ISSYQLPKCI_ ENSG00000132436|ENST00000433017|FIGNL1;nc|ENSG00000132436|Q6PIW4-2|FIGNL1 10.073929032068715 0.6785112666868882 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}[RP]{M(Oxidation (M))|F}SA{[QV]|[N{I|L}]|[RA]|[KV]} 10 -1 + 42.436 0.0 0.0 3.6881 3.6881 77.161 0.0 0.0 0.0 7.944477609833939 5.764837301042718 5.764837301042718 6.154239528859435 0 0.0 2.0 0.4811132596518673 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}[RP]{M(Oxidation (M))|F}SA{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[KT][NG]SA{[QV]|[N{I|L}]|[RA]|[KV]};[KP]{M(Oxidation (M))|F}{I|L}D{M(Oxidation (M))|F}SA{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[KP]{M(Oxidation (M))|F}DA{[QV]|[N{I|L}]|[RA]|[KV]};[KP]{I|L}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}SA{[QV]|[N{I|L}]|[RA]|[KV]};[KP]{M(Oxidation (M))|F}S{I|L}{M(Oxidation (M))|F}DA{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[KT]EEA{[QV]|[N{I|L}]|[RA]|[KV]};[QA]{M(Oxidation (M))|F}D{I|L}PK{M(Oxidation (M))|F}SV;[KP]{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F}DA{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[RP]{M(Oxidation (M))|F}SA{[QV]|[N{I|L}]|[RA]|[KV]} 3.6881;3.1532;2.9977;2.6767;2.4299;2.4009;2.3308;2.0965;1.9862;1.9571 -;-;-;-;-;-;-;-;-;- 865 1 1.781 72685.9 1.0 14851 5894 20736 HBL1_DMSO_200M_050219_1,20747 HBL1_DMSO_200M_050219_1,20747,ISSYQLPKCI False False TVFDLPKFSV 101.54363 576.815783679485 1300609.875 20736.0 ENSG00000132436|ENST00000433017|FIGNL1;;nc|ENSG00000132436|Q6PIW4-2|FIGNL1 5.9651414553324384 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20748 101.56 800.0 164980.0 25 0 31764.0 -1 0 122 733.3829750031264 2197.127095609579 3 733.7162963747978 MULTI CID FTMS 0 0 0 20736 117749.296875 0.8296492839278051 -1 0.1200103759765625 12 3 W{M(Oxidation (M))|F}{I|L}{I|L} 4 -1 38.928 0.0 0.0 1.7718 0.0 0.0 0.0 1634.7674808636025 1634.7674808636025 2.069400253826778 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 W{M(Oxidation (M))|F}{I|L}{I|L} 1.7718 - 1638 + 1 1.781 101430.0 0.5 14852 5894 20736 HBL1_DMSO_200M_050219_1,20748 HBL1_DMSO_200M_050219_1,20748, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20749 101.57 475.0 358050.0 25 0 15896.0 -1 0 180 959.5551531851332 0 959.562060534954 PEAK CID FTMS 0 0 0 -1 0 13 3 V{I|L}NG{I|L}{I|L}Q 7 -1 33.537 0.0 0.0 1.7493 0.0 0.0 976.5557276575728 200.0686129205688 1176.6243405781415 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.9247425010840048 V{I|L}NG{I|L}{I|L}Q 1.7493 - 1525 + 1 1.781 110921.5 1.0 14853 5894 20736 HBL1_DMSO_200M_050219_1,20749 HBL1_DMSO_200M_050219_1,20749, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20750 101.58 800.0 105980.0 25 0 4456.0 -1 0 128 1078.816210925579 0 1078.816210925579 PEAK CID FTMS 0 0 0 -1 0 14 3 R{[{M(Oxidation (M))|F}C]|[YS]}QV{I|L}{I|L}DH 9 -1 29.218 0.0 0.0 1.3555 0.0 0.0 802.9110340564333 238.1207064264281 1041.0317404828616 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R{[{M(Oxidation (M))|F}C]|[YS]}QV{I|L}{I|L}DH 1.3555 - 161 + 1 1.781 55191.6 0.5299999713897705 14854 5894 20736 HBL1_DMSO_200M_050219_1,20750 HBL1_DMSO_200M_050219_1,20750, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20751 101.58 203.0 279260.0 25 0 15339.0 -1 0 119 942.9571521213928 1883.8997513095856 2 942.9605590701104 MULTI CID FTMS 0 0 0 20736 104997.6015625 0.5268377846655029 -1 0.1200103759765625 15 3 [TA]{I|L}D{I|L}A{I|L}{I|L} 8 -1 67.115 0.0 0.0 3.5626 0.0 0.0 0.0 1070.3927072024171 1070.3927072024171 45.94457550631503 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.8494850021680094 0.0 [TA]{I|L}D{I|L}A{I|L}{I|L} 3.5626 - 625 1 1.781 41398.7 1.0 14855 5894 20736 HBL1_DMSO_200M_050219_1,20751 HBL1_DMSO_200M_050219_1,20751, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20752 101.6 703.0 159510.0 25 0 10977.0 -1 0 126 695.0391292318593 2082.0955582957777 3 695.3760253787041 MULTI CID FTMS 0 0 0 20736 82124.0859375 0.7565306551619758 -1 0.1200103759765625 16 3 [NP]N{I|L}{I|L}T 6 -1 33.709 0.0 0.0 1.619 0.0 0.0 0.0 1426.716443876109 1426.716443876109 5.783984463909562 0.0 0.0 0.0 0 0.0 0.5376020021010439 0.3494850021680094 1.0189301784845295 [NP]N{I|L}{I|L}T 1.619 - 1439 1 1.781 90704.4 1.0 14856 5894 20736 HBL1_DMSO_200M_050219_1,20752 HBL1_DMSO_200M_050219_1,20752, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20753 101.6 370.0 58536.0 25 0 1694.0 -1 0 59 1126.774305006985 0 1126.543994128704 PEAK CID FTMS 0 0 0 20736 26767.98828125 1.0 0 0.0 17 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.781 25024.4 1.0 14857 5894 20736 HBL1_DMSO_200M_050219_1,20753 HBL1_DMSO_200M_050219_1,20753, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20754 101.62 800.0 80428.0 25 0 5018.3 + -1 MRWWQFCRWER 11 79 878.9030282439508 1755.7915035547014 2 878.9045898318291 MULTI CID FTMS 0 0 0 20736 75255.15625 0.600088823507168 -2 0.2494735717773437 18 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))RWWQFC(Carbamidomethyl (C))RWER_ REV__ENST00000430334.7_1_17:43555485-43568071:-|nuORF;REV__ENST00000582986.5_1_17:62801160-62833227:-|nuORF 0.0 0.8751479354844584 3 {[QN]|[E{I|L}]|[KN]}NPV{I|L}{I|L}V 8 -1 39.175 0.0 0.0 2.2312 0.0 0.0 0.0 875.2340442056378 875.2340442056378 27.26403468139864 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}NPV{I|L}{I|L}V 2.2312 - 328 1 1.781 50179.9 0.5699999928474426 14858 5894 20736 HBL1_DMSO_200M_050219_1,20754 HBL1_DMSO_200M_050219_1,20754,MRWWQFCRWER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20755 101.63 800.0 24205.0 25 0 2488.1 -1 0 54 988.2061645388604 0 988.2061645388604 PEAK CID FTMS 0 0 0 -1 0 19 3 {I|L} 1 -1 6.9897 0.0 0.0 0.35402 0.0 0.0 986.8127064197143 871.4600924127561 1858.2727988324705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.35402 - 9 + 1 1.781 23018.4 0.6299999952316284 14859 5894 20736 HBL1_DMSO_200M_050219_1,20755 HBL1_DMSO_200M_050219_1,20755, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20756 101.65 800.0 131690.0 25 0 19022.0 -1 0 130 602.2718789138611 601.264602447261 1 602.2743408083916 MULTI CID FTMS 0 0 0 20736 83528.234375 1.0 0 0.0 20 3 {I|L} 1 -1 12.764 0.0 0.0 2.1229 0.0 0.0 470.169339851361 0.0 470.169339851361 0.0 2.9313286207236544 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.1229 - 70 + 1 1.781 80668.3 0.4799999892711639 14860 5894 20736 HBL1_DMSO_200M_050219_1,20756 HBL1_DMSO_200M_050219_1,20756, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20758 101.65 5.4 15778000.0 25 0 1248700.0 -1 0 90 872.4175932028735 3485.641266945094 4 872.6713134646416 MULTI CID FTMS 0 0 0 20757 14212430.0 0.640291555408187 2 -0.1246719360351562 1 3 [YQ]{I|L}H{I|L} 5 -1 38.768 0.0 0.0 1.1122 0.0 0.0 0.0 2828.2634035064684 2828.2634035064684 3.1841443040089885 0.0 0.0 0.0 0 0.5 1.154901959985743 0.0 0.0 [YQ]{I|L}H{I|L} 1.1122 - 263 + 1 1.767 71019.9 1.0 14861 5895 20757 HBL1_DMSO_200M_050219_1,20758 HBL1_DMSO_200M_050219_1,20758, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20759 101.65 5.5 13083000.0 25 0 1698900.0 + 25611 NFPEHIFPAL 10 86 592.8085477936168 1183.6025426540334 2 592.8090087771416 MULTI CID FTMS 0 0 0 20757 10910625.0 1.0 0 0.0 2 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 34.221707139014875 0.2185845369562963 3 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 8 8 56.648 0.0 0.0 4.7861 0.0 0.0 0.0 126.03553186588124 126.03553186588124 37.15472540108173 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.7302046884880937 0.805462187404089 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 4.7861 - 632 + 1 1.767 60236.2 1.0 14862 5895 20757 HBL1_DMSO_200M_050219_1,20759 HBL1_DMSO_200M_050219_1,20759,NFPEHIFPAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20760 101.66 204.0 3190100.0 25 0 166950.0 -1 0 188 1162.8876223461473 3485.641037638642 3 1163.222827136517 MULTI CID FTMS 0 0 0 20757 2030691.5 0.4741699247937713 3 -0.28570556640625 3 3 H{I|L}VEA{I|L}Y{I|L}V 9 -1 97.657 0.0 0.0 2.8017 0.0 0.0 0.0 2445.0370724715626 2445.0370724715626 39.19151464493279 0.0 0.0 0.0 0 3.3807196863200843 0.0 0.3494850021680094 0.0 H{I|L}VEA{I|L}Y{I|L}V 2.8017 - 13238 + 1 1.767 391803.6 1.0 14863 5895 20757 HBL1_DMSO_200M_050219_1,20760 HBL1_DMSO_200M_050219_1,20760, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20761 101.66 26.0 3061300.0 25 0 515530.0 + 29741 QPPPPPLWI 9 81 522.7979655352746 1043.581378137349 2 522.7977783083916 MULTI CID FTMS 0 0 0 20757 2029058.5 0.5921192772238432 1 -0.0862960815429687 4 Unmodified _QPPPPPLWI_ ENSG00000135045|ENST00000376854|C9orf40 38.15118350030904 0.0856056900103839 3 W{I|L} 2 7 18.5 0.0 0.0 1.7727 0.0 0.0 726.4070960197326 0.0 726.4070960197326 0.0 2.3805218275135296 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + W{I|L} 1.7727 + + 150 + 1 1.767 65248.2 1.0 14864 5895 20757 HBL1_DMSO_200M_050219_1,20761 HBL1_DMSO_200M_050219_1,20761,QPPPPPLWI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20762 101.66 51.0 1901700.0 25 0 139930.0 -1 0 90 847.1560457046531 3384.5950769522124 4 847.4074584841728 MULTI CID FTMS 0 0 0 20757 1547195.0 1.0 0 0.0 5 3 [YQ]{I|L}H{I|L}ENG 8 -1 73.977 0.0 0.0 2.1857 0.0 0.0 0.0 2427.0715292443515 2427.0715292443515 25.38364391835536 0.0 0.0 0.0 0 1.0 1.0969100130080565 0.0 1.1861818737241734 [YQ]{I|L}H{I|L}ENG 2.1857 - 926 + 1 1.767 76374.9 1.0 14865 5895 20757 HBL1_DMSO_200M_050219_1,20762 HBL1_DMSO_200M_050219_1,20762, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20763 101.66 71.0 1434900.0 25 0 272800.0 + 26038 NMLPQIFRV 9 74 559.3127733918171 1116.6109938504342 2 559.3132202029228 MULTI CID FTMS 0 0 0 20757 888583.5625 0.5832599062195111 -3 0.430023193359375 6 Unmodified _NMLPQIFRV_ ENSG00000047621|ENST00000261250|C12orf4;ENST00000544258.1_3_12:4598975-4611546:-|nuORF 46.020951573049366 0.0490941689151868 3 [MN]{I|L}[QP]{I|L}{M(Oxidation (M))|F}[RV] 9 0 + 48.93 0.0 0.0 4.382 4.382 86.47 0.0 0.0 0.0 41.4828069691076 2.922152515121219 2.922152515121219 48.930081918074535 0 1.0 1.6989700043360187 0.0 0.4247425010840047 + + [MN]{I|L}[QP]{I|L}{M(Oxidation (M))|F}[RV] 4.382 + + 53 + 1 1.767 84490.9 1.0 14866 5895 20757 HBL1_DMSO_200M_050219_1,20763 HBL1_DMSO_200M_050219_1,20763,NMLPQIFRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20764 101.66 65.0 1080300.0 25 0 194490.0 + 9792 FPANVMDVI 9 75 503.257265842538 1004.499978751876 2 503.2574645876884 MULTI CID FTMS 0 0 0 20757 874696.0 1.0 0 0.0 7 Unmodified _FPANVMDVI_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF 60.38955033654506 0.025866396858536 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANVMDV{I|L} 9 0 + 50.326 0.0 0.0 5.0101 5.0101 85.601 0.0 0.0 0.0 10.796896906561033 10.330145895351848 10.330145895351848 10.796896906561033 0 0.7429928190999391 1.2218487496163564 0.0 1.055462187404089 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANVMDV{I|L};[DV][WK]MDV{I|L};[DV]MN[PA]{M(Oxidation (M))|F}V{I|L};[VS]{[QD]|[EN]|[WG]|[KD]|[RS]}VMDV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AGGVMDV{I|L};[DV]M[WK]DV{I|L};{[NV]|[RG]}{[ES]|[DT]|[{I|L}C]}VMDV{I|L};{[NV]|[RG]}[PA]MD{M(Oxidation (M))|F}V{I|L};{[NV]|[RG]}[PA]{M(Oxidation (M))|F}MDV{I|L};[DV]MGG[PA]{M(Oxidation (M))|F}V{I|L} 5.0101;3.9352;3.8152;3.6184;3.0427;2.988;2.7194;2.6953;2.64;2.5505 +;-;-;-;-;-;-;-;-;- + 260 1 1.767 60718.1 1.0 14867 5895 20757 HBL1_DMSO_200M_050219_1,20764 HBL1_DMSO_200M_050219_1,20764,FPANVMDVI True True FPANVMDVI 101.66296 503.257464587688 28250352.0 20757.0 ENST00000581230.5_1_17:62498125-62502378:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5 4.576411247253418 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20765 101.67 112.0 897190.0 25 0 174600.0 + 39063 TVVNFLIRV 9 97 530.8293433705809 1059.6441338079617 2 530.8295165896416 MULTI CID FTMS 0 0 0 20757 502691.0 1.0 0 0.0 8 Unmodified _TVVNFLIRV_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 71.13359017698441 0.0206607516130725 3 {[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}{I|L}[RV] 9 0 + 85.111 0.0 0.0 8.032 8.032 93.214 0.0 0.0 0.0 27.147642715192504 12.74227503252014 12.74227503252014 9.208187539523747 0 0.8494850021680094 2.0 0.0 1.4731975075880328 + + {[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}{I|L}[RV];{[TV]|[{I|L}S]}VGG{M(Oxidation (M))|F}{I|L}{I|L}[RV];{[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}[RV]{I|L};{[TV]|[{I|L}S]}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[RV];{[TV]|[{I|L}S]}VGG{M(Oxidation (M))|F}{I|L}[RV]{I|L};{[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}V[R{I|L}]{I|L};{[TV]|[{I|L}S]}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]{I|L};{[TV]|[{I|L}S]}VGG{M(Oxidation (M))|F}V[R{I|L}]{I|L};{[TV]|[{I|L}S]}V[KC]{I|L}[KA][KA];VVT[KC]{I|L}[KA][KA] 8.032;7.1631;6.8295;6.2625;5.9605;5.6475;5.06;4.7785;2.9491;0.54334 +;-;-;-;-;-;-;-;-;- + 393 + 1 1.767 85903.6 1.0 14868 5895 20757 HBL1_DMSO_200M_050219_1,20765 HBL1_DMSO_200M_050219_1,20765,TVVNFLIRV True True TVVNFLIRV 101.66532 530.829516589642 7745663.5 20757.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 4.6587278842926025 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20766 101.67 126.0 442420.0 25 0 46907.0 + 25948 NLPDEEIFQQL 11 70 673.3352424362749 1344.6559319393498 2 673.3354369997978 MULTI CID FTMS 0 0 0 20757 387682.625 0.1287130007202042 3 -0.28570556640625 9 Unmodified _NLPDEEIFQQL_ ENSG00000169019|ENST00000381571|COMMD8 28.49450938151212 0.4231428536161201 3 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F} 8 6 36.631 0.0 0.0 2.7242 0.0 0.0 0.0 384.18489857436856 384.18489857436856 9.23197738408308 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.6747425010840047 0.0 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F} 2.7242 - 903 1 1.767 49424.1 1.0 14869 5895 20757 HBL1_DMSO_200M_050219_1,20766 HBL1_DMSO_200M_050219_1,20766,NLPDEEIFQQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20767 101.67 180.0 695330.0 25 0 86237.0 + 34007 SLISTYFHV 9 107 533.782999591004 1065.551446248808 2 533.7825805544853 MULTI CID FTMS 0 0 0 20757 365657.46875 1.0 0 0.0 10 Unmodified _SLISTYFHV_ ENST00000336838.10_1_2:55646279-55646603:-|nuORF 42.09456458481378 0.0639583784996157 3 {[TV]|[{I|L}S]}{I|L}STY{M(Oxidation (M))|F}HV 9 0 {[TV]|[{I|L}S]} + + 43.893 23.724 11.855 4.1193 4.1193 52.851 0.0 0.0 0.0 0.0 -0.6048963894059511 -0.6048963894059511 0.0 0 0.7742275032520141 0.0 0.2742275032520141 0.0 + + {[TV]|[{I|L}S]}{I|L}STY{M(Oxidation (M))|F}HV 4.1193 + + 575 + 1 1.767 97737.1 1.0 14870 5895 20757 HBL1_DMSO_200M_050219_1,20767 HBL1_DMSO_200M_050219_1,20767,SLISTYFHV True True SLISTYFHV 101.67144 533.782580554485 3718824.75 20757.0 ENST00000336838.10_1_2:55646279-55646603:-|nuORF 7.895066420237224 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20768 101.68 190.0 543760.0 25 0 128130.0 + 10124 FPWPKVLKI 9 89 376.570766370445 1126.6904697115351 3 376.5706664919853 MULTI CID FTMS 0 0 0 20757 342350.78125 0.7626192268543379 7 -0.7913360595703125 11 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 49.55428908609986 0.0413471690215031 3 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 50.879 0.0 0.0 4.5158 4.5158 86.943 0.0 0.0 0.0 26.73545499301908 12.254406279932653 12.254406279932653 50.878655169627 0 0.2887254899964357 0.0 0.0 0.5752574989159953 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 4.5158 + + 204 + 1 1.767 91481.4 1.0 14871 5895 20757 HBL1_DMSO_200M_050219_1,20768 HBL1_DMSO_200M_050219_1,20768,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20769 101.68 504.0 368710.0 25 0 33617.0 + 41430 VPLGNLIVV 9 113 923.5925172029011 922.5852407363012 1 923.5940429568292 MULTI CID FTMS 0 0 0 20757 252364.71875 0.209528110809704 3 -0.28570556640625 12 Unmodified _VPLGNLIVV_ ENSG00000100225|ENST00000266087|FBXO7;ENST00000492535.1_1_22:32875160-32883832:+|nuORF;nc|ENSG00000100225|Q9Y3I1-2|FBXO7;nc|ENSG00000100225|Q9Y3I1-3|FBXO7 36.04419817259434 0.0971720506436186 3 {[QV]|[N{I|L}]|[RA]|[KV]}VAPV{I|L} 7 7 53.809 0.0 0.0 5.8325 0.0 0.0 0.0 213.12300713344328 213.12300713344328 23.681065600245056 0.0 0.0 0.0 0 0.3494850021680094 1.0969100130080565 0.0 1.0629529932484498 {[QV]|[N{I|L}]|[RA]|[KV]}VAPV{I|L} 5.8325 - 2721 1 1.767 124543.3 1.0 14872 5895 20757 HBL1_DMSO_200M_050219_1,20769 HBL1_DMSO_200M_050219_1,20769,VPLGNLIVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20770 101.69 313.0 373600.0 25 0 73710.0 + 45729 YYFVFDHAL 9 96 587.7823750067805 1173.550197080361 2 587.7825805544853 MULTI CID FTMS 0 0 0 20757 260523.265625 0.9910450740209846 1 -0.0862960815429687 13 Unmodified _YYFVFDHAL_ ENSG00000109929|ENST00000264027|SC5D;ENST00000524683.5_1_11:121174081-121174345:+|nuORF;ENST00000531140.1_1_11:121174081-121177378:+|nuORF;ENST00000534455.5_1_11:121174081-121175207:+|nuORF 70.71552829651908 0.0208223590022201 3 YY{M(Oxidation (M))|F}V{M(Oxidation (M))|F}DHA{I|L} 9 0 + 78.48 0.0 0.0 6.6874 6.6874 84.373 0.0 0.0 0.0 36.74852186940132 3.922235152300246 3.922235152300246 3.979400086720375 0 0.805462187404089 2.0 1.075257498915995 0.0 + + YY{M(Oxidation (M))|F}V{M(Oxidation (M))|F}DHA{I|L};YY{M(Oxidation (M))|F}V{M(Oxidation (M))|F}D[{I|L}A]H;YY{M(Oxidation (M))|F}V{M(Oxidation (M))|F}K[NG]H;YY{M(Oxidation (M))|F}VK{M(Oxidation (M))|F}[NG]H;YY{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}THA{I|L};YY{I|L}[YT]MHA{I|L};YY{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T[{I|L}A]H;YY{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}THA{I|L};YY{I|L}[YT]M[{I|L}A]H;YY{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T[{I|L}A]H 6.6874;6.3483;5.2202;4.7457;4.556;4.3804;4.2169;4.1239;4.0413;3.7848 +;-;-;-;-;-;-;-;-;- + 933 + 1 1.767 92265.2 1.0 14873 5895 20757 HBL1_DMSO_200M_050219_1,20770 HBL1_DMSO_200M_050219_1,20770,YYFVFDHAL True True YYFVFDHAL 101.68971 587.782580554485 2716318.25 20757.0 ENST00000534455.5_1_11:121174081-121175207:+|nuORF;;ENST00000524683.5_1_11:121174081-121174345:+|nuORF;;ENST00000531140.1_1_11:121174081-121177378:+|nuORF;;ENSG00000109929|ENST00000264027|SC5D 6.43364159266154 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20771 101.69 114.0 938260.0 25 0 73938.0 + -1 ELFTGFIKV 9 148 527.2588933406239 1052.5032337480477 2 527.2592040896416 MULTI CID FTMS 0 0 0 20757 257509.8125 1.0 0 0.0 14 Carbamidomethyl (C) _TVPC(Carbamidomethyl (C))PYGFI_ ENSG00000162298|ENST00000377190|SYVN1;nc|ENSG00000162298|Q86TM6-2|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-3|SYVN1 18.13498045792455 0.3457906370836843 3 {[TV]|[{I|L}S]}DN{M(Oxidation (M))|F}{[QC]|[C(Carbamidomethyl (C))A]}KV 9 -1 + 35.304 0.0 0.0 3.3543 3.3543 78.001 0.0 0.0 0.0 9.612144151591467 1.1692462089739948 1.1692462089739948 8.00045217604444 0 0.2742275032520141 2.0 0.0 0.1803115997617927 {[TV]|[{I|L}S]}DN{M(Oxidation (M))|F}{[QC]|[C(Carbamidomethyl (C))A]}KV;[PA]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}CE{I|L};{[TV]|[{I|L}S]}DGG{M(Oxidation (M))|F}{[QC]|[C(Carbamidomethyl (C))A]}KV;{[TV]|[{I|L}S]}D[EP]G[WH]{I|L};{[TV]|[{I|L}S]}DV[W{M(Oxidation (M))|F}]GMV;[PA]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{[QC]|[C(Carbamidomethyl (C))A]}KV;{[TV]|[{I|L}S]}DV[W{M(Oxidation (M))|F}]{[WT]|[RM]};[PA]{M(Oxidation (M))|F}GG{M(Oxidation (M))|F}{I|L}CE{I|L};[{I|L}P]A{M(Oxidation (M))|F}A[YE]{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]A{M(Oxidation (M))|F}A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WD] 3.3543;2.5941;2.4794;2.2594;2.15;2.1043;2.0538;1.7192;1.6953;1.6953 -;-;-;-;-;-;-;-;-;- 1168 + 1 1.767 87932.3 1.0 14874 5895 20757 HBL1_DMSO_200M_050219_1,20771 HBL1_DMSO_200M_050219_1,20771,TVPCPYGFI False False ELFTGFIKV 101.6921 527.259204089642 2829463.75 20757.0 ENSG00000162298|ENST00000377190|SYVN1;;nc|ENSG00000162298|Q86TM6-2|SYVN1;;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;;nc|ENSG00000162298|Q86TM6-3|SYVN1 5.919411341349284 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20772 101.7 187.0 437020.0 25 0 101410.0 + 20093 LIYYLVLL 8 95 505.3182480458437 1008.6219431584874 2 505.3180724978447 MULTI CID FTMS 0 0 0 20757 243532.921875 0.4846956215735526 1 -0.0862960815429687 15 Unmodified _LIYYLVLL_ REV__ENSG00000108506|ENST00000251334|INTS2;REV__nc|ENSG00000108506|Q9H0H0|INTS2 32.45364647766026 0.3613649037604678 3 [VP]EQVV{I|L}{I|L}{I|L} 9 -1 + 42.74 0.0 0.0 4.2375 4.2375 74.159 0.0 0.0 0.0 2.673620072868502 10.330145895351832 2.673620072868502 2.673620072868502 0 0.8182503180159344 0.7695510786217261 0.0 0.2302046884880938 [VP]EQVV{I|L}{I|L}{I|L};[{I|L}A][DG]PVV{I|L}{I|L}{I|L};[VP]EQV{I|L}V{I|L}{I|L};[VP]EVQV{I|L}{I|L}{I|L};[{I|L}A][DG]PV{I|L}V{I|L}{I|L};[VP]EVQ{I|L}V{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}NPVV{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EPVV{I|L}{I|L}{I|L};{I|L}{I|L}YYV{I|L}{I|L}{I|L};[VP]E[AG]VV{I|L}{I|L}{I|L} 4.2375;3.9724;3.939;3.843;3.674;3.5445;3.3053;3.3053;3.1346;3.0963 -;-;-;-;-;-;-;-;-;- 312 1 1.767 66088.5 1.0 14875 5895 20757 HBL1_DMSO_200M_050219_1,20772 HBL1_DMSO_200M_050219_1,20772,LIYYLVLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20773 101.7 230.0 287080.0 25 0 39417.0 + 45833 YYPEYKLLF 9 71 618.3206831230359 1234.6268133128715 2 618.3215209841728 MULTI CID FTMS 0 0 0 20757 197112.140625 1.0 0 0.0 16 Unmodified _YYPEYKLLF_ ENSG00000159720|ENST00000290949|ATP6V0D1 25.399314129420983 0.2080152500878129 3 YYPEY[K{I|L}]{I|L}{M(Oxidation (M))|F} 9 0 + 48.324 0.0 0.0 3.9141 3.9141 77.954 0.0 0.0 0.0 24.13734275855269 0.4318250140072166 0.4318250140072166 6.368220975871743 0 0.3252574989159953 2.0 0.0 0.0 + + YYPEY[K{I|L}]{I|L}{M(Oxidation (M))|F};YYPEY[K{I|L}]{M(Oxidation (M))|F}{I|L} 3.9141;3.3983 +;- + 130 + 1 1.767 55500.3 1.0 14876 5895 20757 HBL1_DMSO_200M_050219_1,20773 HBL1_DMSO_200M_050219_1,20773,YYPEYKLLF False True YYPEYKLLF 101.70004 618.321520984173 1671681.5 20757.0 ENSG00000159720|ENST00000290949|ATP6V0D1 5.062221527099609 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20774 101.71 447.0 240420.0 25 0 30555.0 + 1819 ALTELLAKI 9 129 486.3103788438592 970.6062047545184 2 486.3110229372978 MULTI CID FTMS 0 0 0 20757 167768.9375 0.0049281519104736 28 -1.7248077392578125 17 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 85.64151623876279 0.0161498729896241 3 [VS]VE{I|L}{I|L}AK{I|L} 9 3 + 70.657 0.0 0.0 7.2797 7.2797 83.87 0.0 0.0 0.0 13.270898818319722 12.98332479720628 12.98332479720628 2.737642882298914 0 1.5941876774005248 1.0 0.0 0.1861818737241735 [VS]VE{I|L}{I|L}AK{I|L};[{I|L}A]TE{I|L}{I|L}KA{I|L};[{I|L}A]TA{I|L}{I|L}VSA{I|L};[VS]VE{I|L}{I|L}KA{I|L};[{I|L}A]TA{I|L}{I|L}G{I|L}S{I|L};[{I|L}A]TVVVVSA{I|L};[VS]VA{I|L}{I|L}VSA{I|L};[{I|L}A]TA{I|L}S[{I|L}V]A{I|L};[{I|L}A]TA{I|L}G{I|L}{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}TA{I|L}{I|L}KA{I|L} 7.2797;6.9976;6.8101;6.375;5.7636;5.0886;4.9677;4.9656;4.9205;4.8814 -;-;-;-;-;-;-;-;-;- 2662 + 1 1.767 86087.9 1.0 14877 5895 20757 HBL1_DMSO_200M_050219_1,20774 HBL1_DMSO_200M_050219_1,20774,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20775 101.72 800.0 137660.0 25 0 17703.0 + 36655 TAVESFLTI 9 132 490.7687604328746 979.5229679325494 2 490.7687866091728 MULTI CID FTMS 0 0 0 20757 165641.46875 0.2635838085326624 2 -0.1246719360351562 18 Unmodified _TAVESFLTI_ ENSG00000143653|ENST00000366510|SCCPDH 28.486842064014134 0.1687311288560894 3 {M(Oxidation (M))|F}{M(Oxidation (M))|F}PT{I|L} 5 6 31.912 0.0 0.0 3.258 0.0 0.0 356.2145095358681 0.0 356.2145095358681 0.0 9.73320034371433 0.0 0.0 0 0.0 0.0 0.5994850021680094 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F}PT{I|L} 3.258 - 1220 + 1 1.767 86627.5 0.5600000023841858 14878 5895 20757 HBL1_DMSO_200M_050219_1,20775 HBL1_DMSO_200M_050219_1,20775,TAVESFLTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20776 101.73 240.0 231740.0 25 0 14560.0 + 12064 GQFEELLRL 9 87 552.8065233947348 1103.5984938562694 2 552.8072387576103 MULTI CID FTMS 0 0 0 20757 157326.96875 0.2491513844941133 1 -0.0862960815429687 19 Unmodified _GQFEELLRL_ ENSG00000108010|ENST00000331244|GLRX3 45.69961567697781 0.0497987121815769 3 {[QG]|[NA]}{M(Oxidation (M))|F}EE{I|L}{I|L}R{I|L} 9 0 + 67.271 0.0 0.0 6.0956 6.0956 92.496 0.0 0.0 0.0 47.09324830722808 12.587418566968154 12.587418566968154 67.27053597683239 0 0.8494850021680094 0.7695510786217261 0.4247425010840047 0.0 + + {[QG]|[NA]}{M(Oxidation (M))|F}EE{I|L}{I|L}R{I|L} 6.0956 + + 120 + 1 1.767 49993.4 1.0 14879 5895 20757 HBL1_DMSO_200M_050219_1,20776 HBL1_DMSO_200M_050219_1,20776,GQFEELLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20777 101.73 361.0 212140.0 25 0 44858.0 + -1 MIAAKMLIL 9 110 510.3014963088324 1018.5884396844648 2 510.3025085330009 MULTI CID FTMS 0 0 0 20757 153271.1875 0.060588028808244 6 -0.692291259765625 20 Oxidation (M) _MIAAKM(Oxidation (M))LIL_ REV__ENST00000536974.5_3_12:19389949-19406890:+|nuORF 23.1484247019978 0.2366544122328345 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[KT]{I|L}M{I|L}{I|L} 9 -1 + 34.395 0.0 0.0 3.3768 3.3768 76.036 0.0 0.0 0.0 0.4229695845116836 8.90137743995134 0.4229695845116836 5.740312677277188 0 0.805462187404089 1.0969100130080565 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[KT]{I|L}M{I|L}{I|L};[VG][YV]KPM{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[KT]M{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[KT]{I|L}{I|L}M{I|L};[YV]{I|L}{[NV]|[RG]}W{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}YQQ{I|L}{I|L}{I|L};[VG][YV]KP{I|L}M{I|L};[YV]{I|L}PK{[WT]|[RM]}{I|L};[YV]{I|L}{[NV]|[RG]}{[DA]|[EG]}{I|L}{I|L};[YV]{I|L}PK{[ET]|[MV]}G{I|L} 3.3768;2.8132;2.7857;2.7074;2.6382;2.4935;2.1439;2.0246;1.7288;1.7238 -;-;-;-;-;-;-;-;-;- 638 1 1.767 65761.0 1.0 14880 5895 20757 HBL1_DMSO_200M_050219_1,20777 HBL1_DMSO_200M_050219_1,20777,MIAAKMLIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20779 101.74 275.0 427600.0 25 0 31589.0 -1 0 102 698.135186505527 3485.639550194635 5 698.3370239138603 MULTI CID FTMS 0 0 0 20778 135832.984375 0.2698402800105015 3 -0.353851318359375 1 3 [YQ]{I|L}ENY{M(Oxidation (M))|F}M 8 -1 45.525 0.0 0.0 1.3061 0.0 0.0 0.0 2394.1284167319973 2394.1284167319973 7.878714353447101 0.0 0.0 0.0 0 0.0 1.154901959985743 0.8252574989159953 0.7614393726401688 [YQ]{I|L}ENY{M(Oxidation (M))|F}M 1.3061 - 1108 1 1.769 92656.4 1.0 14881 5896 20778 HBL1_DMSO_200M_050219_1,20779 HBL1_DMSO_200M_050219_1,20779, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20780 101.74 70.0 1528900.0 25 0 99109.0 + + 12328 IVIGSIIDV 9 86 926.5672798934904 925.5600034268904 1 928.5724365115166 MULTI CID FTMS 0 0 0 20778 229889.6875 0.0791407890525374 4 -0.5107955932617188 2 Unmodified _GSLLLKQAP_ nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000157388|Q01668-2|CACNA1D;ENSG00000081248|ENST00000362061|CACNA1S;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000157388|Q01668-3|CACNA1D;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000157388|Q01668-4|CACNA1D;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C 20.453626601364224 0.2830276176381075 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V{I|L}{I|L}DP 8 -1 + 43.969 0.0 0.0 4.7505 4.7505 74.019 0.0 0.0 0.0 5.039237471316298 14.003260657828475 5.039237471316298 1.5051499783199065 0 0.0 0.0 1.9634679910804405 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V{I|L}{I|L}DP;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}V{I|L}DP;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{I|L}{I|L}DP;{[QN]|[E{I|L}]|[KN]}KV{I|L}{I|L}DP;{[QN]|[E{I|L}]|[KN]}K{I|L}V{I|L}DP;[{I|L}V]NVEKKP;[{I|L}V]NKK{I|L}DP;[{I|L}V]GGVEKKP;[{I|L}V]GGKK{I|L}DP;[{I|L}V]N{I|L}KKDP 4.7505;4.5879;4.3405;4.206;4.0434;2.8496;2.8496;2.4691;2.4691;2.3342 -;-;-;-;-;-;-;-;-;- 3222 1 1.769 79891.1 1.0 14882 5896 20778 HBL1_DMSO_200M_050219_1,20780 HBL1_DMSO_200M_050219_1,20780,GSLLLKQAP False False IVIGSIIDV 101.7442 928.572436511517 33187864.0 20778.0 nc|ENSG00000151067|Q13936-13|CACNA1C;;nc|ENSG00000151067|Q13936-32|CACNA1C;;nc|ENSG00000151067|Q13936-5|CACNA1C;;nc|ENSG00000151067|Q13936-7|CACNA1C;;nc|ENSG00000157388|Q01668-2|CACNA1D;;ENSG00000081248|ENST00000362061|CACNA1S;;nc|ENSG00000151067|Q13936-37|CACNA1C;;nc|ENSG00000151067|Q13936-10|CACNA1C;;nc|ENSG00000151067|Q13936-11|CACNA1C;;nc|ENSG00000151067|Q13936-4|CACNA1C;;nc|ENSG00000151067|Q13936-9|CACNA1C;;nc|ENSG00000151067|Q13936-8|CACNA1C;;nc|ENSG00000151067|Q13936-36|CACNA1C;;ENSG00000157388|ENST00000350061|CACNA1D;;nc|ENSG00000157388|Q01668-3|CACNA1D;;nc|ENSG00000151067|Q13936-16|CACNA1C;;nc|ENSG00000151067|Q13936-34|CACNA1C;;nc|ENSG00000151067|Q13936-3|CACNA1C;;nc|ENSG00000151067|Q13936|CACNA1C;;nc|ENSG00000151067|Q13936-35|CACNA1C;;nc|ENSG00000151067|Q13936-2|CACNA1C;;nc|ENSG00000151067|Q13936-31|CACNA1C;;nc|ENSG00000151067|Q13936-17|CACNA1C;;nc|ENSG00000151067|Q13936-22|CACNA1C;;nc|ENSG00000157388|Q01668-4|CACNA1D;;nc|ENSG00000151067|Q13936-18|CACNA1C;;nc|ENSG00000151067|Q13936-21|CACNA1C 2.2455727656682334 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20781 101.75 176.0 991250.0 25 0 96523.0 + 11932 GMPDFLEKL 9 113 525.2702477700904 1048.5259426069806 2 525.2709228396416 MULTI CID FTMS 0 0 0 20778 226272.8125 0.0622031986677074 -2 0.266845703125 3 Unmodified _GMPDFLEKL_ ENSG00000084090|ENST00000337288|STARD7 53.832793166522166 0.0319663582346103 3 {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L} 9 0 + 55.651 0.0 0.0 5.3075 5.3075 87.966 0.0 0.0 0.0 8.845084036140499 12.98332479720628 8.845084036140499 17.084171445583678 0 0.3494850021680094 0.0 1.2312958898387063 0.0 + + {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L};[DP]{M(Oxidation (M))|F}{I|L}EK{I|L}{[MG]|[TS]};{[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}[VG]T{I|L};{[MG]|[TS]}{I|L}[MD]{I|L}EK{I|L};[DP]{M(Oxidation (M))|F}{I|L}TR{I|L}{[MG]|[TS]};[DP]{M(Oxidation (M))|F}E{I|L}K{I|L}{[MG]|[TS]};{[MG]|[TS]}PD{M(Oxidation (M))|F}[R{I|L}]T{I|L};{[MG]|[TS]}{[ET]|[MV]}E{I|L}EK{I|L};{[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}{I|L}{I|L}[SG];{NN|[MP]|[D{I|L}]|[EV]}M{I|L}EK{I|L}{[MG]|[TS]} 5.3075;3.6782;3.5429;3.3933;3.1769;2.8722;2.8439;2.7729;2.5486;2.5403 +;-;-;-;-;-;-;-;-;- + 763 + 1 1.769 139268.3 1.0 14883 5896 20778 HBL1_DMSO_200M_050219_1,20781 HBL1_DMSO_200M_050219_1,20781,GMPDFLEKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20782 101.76 800.0 129340.0 25 0 7273.5 -1 0 175 793.6635009646416 0 793.6635009646416 PEAK CID FTMS 0 0 0 -1 0 4 3 S 1 -1 5.6546 0.0 0.0 0.35669 0.0 0.0 1363.2112659900267 132.04596887760002 1495.2572348676267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1050541008457974 0.0 S 0.35669 - 210 + 1 1.769 68781.7 0.5 14884 5896 20778 HBL1_DMSO_200M_050219_1,20782 HBL1_DMSO_200M_050219_1,20782, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20783 101.77 623.0 332990.0 25 0 18856.0 + 10132 FPWPKVLKI 9 139 564.3527799952674 1126.691007057335 2 564.3533813357353 MULTI CID FTMS 0 0 0 20778 97013.671875 0.3061103297282352 7 -0.832489013671875 5 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 59.36838082759317 0.0264317782606298 3 {I|L}MWPKV{I|L}K{I|L} 9 2 + 86.827 0.0 0.0 7.7064 7.7064 91.299 0.0 0.0 0.0 15.228787452803374 8.507112333562844 8.507112333562844 8.507112333562844 0 2.309894379144197 2.0 0.0 0.4957416651753049 {I|L}MWPKV{I|L}K{I|L};{I|L}MWPKV{I|L}{I|L}K;{M(Oxidation (M))|F}PWPKV{I|L}K{I|L};[WP]KV{I|L}KP{M(Oxidation (M))|F}{I|L};[WP]KV{I|L}M{I|L}K{I|L};[WP]KV{I|L}P{M(Oxidation (M))|F}K{I|L};[WP]KV{I|L}K{I|L}M{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K;[WP]KV{I|L}PK{M(Oxidation (M))|F}{I|L};[WP]KVP{M(Oxidation (M))|F}{I|L}K{I|L} 7.7064;6.9513;6.3548;6.0545;5.9197;5.6525;5.631;5.5997;5.5201;5.2993 -;-;+;-;-;-;-;-;-;- + 2843 + 1 1.769 163686.0 1.0 14885 5896 20778 HBL1_DMSO_200M_050219_1,20783 HBL1_DMSO_200M_050219_1,20783,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20785 101.78 121.0 507460.0 25 0 70250.0 + 17090 KLFDDMMYEL 10 69 652.7982757779899 1303.5819986227798 2 652.7991210818291 MULTI CID FTMS 0 0 0 20784 397874.6875 0.4217566582748112 2 -0.3154754638671875 1 Unmodified _KLFDDMMYEL_ ENSG00000000460|ENST00000359326|C1orf112 38.61474834105838 0.1721950110283317 3 GDMMYE{I|L} 7 4 64.769 0.0 0.0 4.9685 0.0 0.0 446.2562733380875 0.0 446.2562733380875 0.0 49.28411676657959 0.0 0.0 0 0.3494850021680094 0.0 1.2302046884880935 0.0 GDMMYE{I|L} 4.9685 - 110 1 1.769 52454.1 1.0 14886 5897 20784 HBL1_DMSO_200M_050219_1,20785 HBL1_DMSO_200M_050219_1,20785,KLFDDMMYEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20786 101.78 221.0 455250.0 25 0 43719.0 + 45614 YVLDINSIDNL 11 111 639.8323407677024 1277.6501286022046 2 639.8323242068291 MULTI CID FTMS 0 0 0 20784 344584.03125 0.3731869698806912 2 -0.3154754638671875 2 Unmodified _YVLDINSIDNL_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 66.45667989310934 0.0429411148994294 3 {NN|[MP]|[D{I|L}]|[EV]}NS{I|L}D{I|L}D 8 5 56.124 0.0 0.0 4.3928 0.0 0.0 0.0 389.2210263895672 389.2210263895672 2.1218928235929724 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.6989700043360187 1.2302046884880935 {NN|[MP]|[D{I|L}]|[EV]}NS{I|L}D{I|L}D 4.3928 - 1892 1 1.769 84225.0 1.0 14887 5897 20784 HBL1_DMSO_200M_050219_1,20786 HBL1_DMSO_200M_050219_1,20786,YVLDINSIDNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20787 101.79 800.0 226650.0 25 0 38975.0 + 42332 YPAGFMDVI 9 161 506.3137976394721 0 506.7443420290947 PEAK CID FTMS 0 0 0 20784 48615.79296875 0.8605054158913069 -1 0.0383758544921875 3 Unmodified _VTAEPIRLL_ ENST00000406274.1_1_6:13521672-13522002:+|nuORF;ENSG00000129824|ENST00000250784|RPS4Y1;ENSG00000198034|ENST00000316084|RPS4X;ENST00000486733.2_1_X:71494866-71496063:-|nuORF;ENST00000373626.4_1_X:71494279-71497060:-|nuORF 14.838274106304384 0.2567717476666951 3 DK{I|L}R 4 7 21.124 0.0 0.0 2.0902 0.0 0.0 254.12461334022083 241.15686975650627 495.28148309672713 0.0 0.0 0.0 0.0 0 0.6421590589602533 0.0 0.0 0.0 DK{I|L}R 2.0902 - 638 + 1 1.769 142456.6 0.9800000190734864 14888 5897 20784 HBL1_DMSO_200M_050219_1,20787 HBL1_DMSO_200M_050219_1,20787,VTAEPIRLL False False YPAGFMDVI 101.795 506.744342029095 365721.0625 20784.0 ENST00000406274.1_1_6:13521672-13522002:+|nuORF;;ENSG00000129824|ENST00000250784|RPS4Y1;;ENSG00000198034|ENST00000316084|RPS4X;;ENST00000486733.2_1_X:71494866-71496063:-|nuORF;;ENST00000373626.4_1_X:71494279-71497060:-|nuORF 0.6812696854273478 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20788 101.8 556.0 305860.0 25 0 23600.0 + 26705 NYPAFMMEM 9 136 567.2268020774719 1132.4390512217435 2 567.2270385622978 MULTI CID FTMS 0 0 0 20784 208605.46875 0.4411016653477311 -1 0.0383758544921875 4 Unmodified _NYPAFMMEM_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 100.37149154755038 0.0107586824602606 3 [YN]PA{M(Oxidation (M))|F}MM{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 0 + 57.877 0.0 0.0 5.1108 5.1108 74.731 0.0 0.0 0.0 1.249387366082999 1.249387366082999 1.249387366082999 1.249387366082999 0 0.8609243748081782 1.6989700043360187 0.0 1.9916440611282624 + + [YN]PA{M(Oxidation (M))|F}MM{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YD]|[{M(Oxidation (M))|F}M]}MM{M(Oxidation (M))|F}APQM;[YN]P[WY]M{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[YN]C(Carbamidomethyl (C))[KG]TMEM;{[YD]|[{M(Oxidation (M))|F}M]}M[WY]PQM;[PA]YN{M(Oxidation (M))|F}MM{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YD]|[{M(Oxidation (M))|F}M]}MM{M(Oxidation (M))|F}AP[AG]M;{[YD]|[{M(Oxidation (M))|F}M]}MM[WK]EM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KG]{M(Oxidation (M))|F}MM{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[MT]VN{M(Oxidation (M))|F}MM{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 5.1108;5.0005;2.9692;2.8911;2.8588;2.4937;2.4286;2.4184;2.2679;2.233 +;-;-;-;-;-;-;-;-;- + 2378 1 1.769 131149.8 1.0 14889 5897 20784 HBL1_DMSO_200M_050219_1,20788 HBL1_DMSO_200M_050219_1,20788,NYPAFMMEM True True NYPAFMMEM 101.80477 567.227038562298 2985554.25 20784.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 3.19352130095164 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20789 101.82 800.0 248060.0 25 0 11371.0 -1 0 130 1129.2048186317706 3384.5926264955124 3 1129.874438464642 MULTI CID FTMS 0 0 0 20784 202771.359375 0.7083906629359984 1 -0.1610336303710937 5 3 H{I|L}VQANY 7 -1 73.219 0.0 0.0 2.1633 0.0 0.0 0.0 2556.1358076119864 2556.1358076119864 59.534794932731714 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.8494850021680094 H{I|L}VQANY 2.1633 - 384 + 1 1.769 118245.6 0.8399999737739563 14890 5897 20784 HBL1_DMSO_200M_050219_1,20789 HBL1_DMSO_200M_050219_1,20789, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20790 101.83 424.0 632250.0 25 0 55957.0 + 17335 KLVNILVQL 9 182 520.347326919156 1038.680100905112 2 520.3477050662041 MULTI CID FTMS 0 0 0 20784 202969.890625 0.7348146789692469 -1 0.0383758544921875 6 Unmodified _KLVNILVQL_ ENSG00000115760|ENST00000421745|BIRC6 78.14939416004806 0.0179651292570206 3 [{I|L}V]N{I|L}K{I|L}VQ{I|L} 9 2 + 81.531 0.0 0.0 7.8495 7.8495 83.342 0.0 0.0 0.0 1.4916623986031396 16.47817481888636 1.4916623986031396 1.4916623986031396 0 0.5649093276264391 1.3010299956639813 0.0 1.9049471895720984 [{I|L}V]N{I|L}K{I|L}VQ{I|L};[VG]AV{I|L}K{I|L}VQ{I|L};[{I|L}A]GVVK{I|L}VQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}K{I|L}VQ{I|L};[{I|L}V]QVK{I|L}VQ{I|L};[VG]AVK{I|L}{I|L}VQ{I|L};[AG]{I|L}VVK{I|L}VQ{I|L};[VG]A{I|L}VK{I|L}VQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VK{I|L}VQ{I|L};[Q{I|L}]VVK{I|L}VQ{I|L} 7.8495;7.7059;7.7059;7.7037;7.6359;7.5597;7.5065;7.4923;7.4901;7.4064 -;-;-;-;-;-;-;-;-;- 3798 1 1.769 202334.1 1.0 14891 5897 20784 HBL1_DMSO_200M_050219_1,20790 HBL1_DMSO_200M_050219_1,20790,KLVNILVQL True True KLVNILVQL 101.82619 520.347705066204 2144344.25 20784.0 ENSG00000115760|ENST00000421745|BIRC6 2.564419070879618 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20791 101.84 781.0 213410.0 25 0 11425.0 26254 NQLEEEDMM 9 197 569.7256832702752 1137.4368136073504 2 569.7263061404228 MULTI CID FTMS 0 0 0 20784 177364.359375 0.2963911894470051 2 -0.3154754638671875 7 Unmodified _NQLEEEDMM_ ENSG00000155629|ENST00000339364|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1 23.1484247019978 0.2366544122328345 3 A{M(Oxidation (M))|F}H{I|L} 4 9 23.729 0.0 0.0 2.0862 0.0 0.0 651.1883222516848 0.0 651.1883222516848 0.0 0.5419072662945723 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 A{M(Oxidation (M))|F}H{I|L} 2.0862 - 776 + 1 1.769 128001.0 1.0 14892 5897 20784 HBL1_DMSO_200M_050219_1,20791 HBL1_DMSO_200M_050219_1,20791,NQLEEEDMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20792 101.85 800.0 409350.0 25 0 12525.0 -1 0 167 1188.2178245999826 3561.631644400148 3 1188.548266589642 MULTI CID FTMS 0 0 0 20784 167740.046875 0.3305194105469534 -1 0.0383758544921875 8 3 [Y{M(Oxidation (M))|F}]QV{[{M(Oxidation (M))|F}H]|[RQ]}QDAN{I|L}NPMN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 30 -1 [Y{M(Oxidation (M))|F}]QV{[{M(Oxidation (M))|F}H]|[RQ]}QDAN{I|L}NP + + 113.47 54.378 3.4553 3.1859 3.1859 50.547 0.0 0.0 0.0 0.0 56.04127356556057 0.0 0.0 0 1.8494850021680087 0.0 0.0 2.197621246364342 [Y{M(Oxidation (M))|F}]QV{[{M(Oxidation (M))|F}H]|[RQ]}QDAN{I|L}NPMN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.1859 - 264912 + 1 1.769 194040.5 0.800000011920929 14893 5897 20784 HBL1_DMSO_200M_050219_1,20792 HBL1_DMSO_200M_050219_1,20792, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20793 101.86 225.0 313970.0 25 0 44124.0 + 35891 SVLVLIAATI 10 94 500.3258597004785 998.6371664677572 2 500.3253356814384 MULTI CID FTMS 0 0 0 20784 136186.53125 0.8163146074150666 -1 0.0383758544921875 9 Unmodified _SVLVLIAATI_ ENSG00000138079|ENST00000260649|SLC3A1;nc|ENSG00000138079|Q07837-3|SLC3A1;nc|ENSG00000138079|Q07837-5|SLC3A1;nc|ENSG00000138079|Q07837-6|SLC3A1;nc|ENSG00000138079|Q07837-7|SLC3A1 47.74868867922204 0.0933642699623533 3 [VS]{I|L}V{M(Oxidation (M))|F}V 6 6 55.947 0.0 0.0 5.6024 0.0 0.0 0.0 351.24128137760005 351.24128137760005 30.73368228725151 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.0 0.0 [VS]{I|L}V{M(Oxidation (M))|F}V 5.6024 - 876 + 1 1.769 59202.1 1.0 14894 5897 20784 HBL1_DMSO_200M_050219_1,20793 HBL1_DMSO_200M_050219_1,20793,SVLVLIAATI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20794 101.87 460.0 41359.0 25 0 2887.8 -1 0 47 817.0213500857353 0 817.0213500857353 PEAK CID FTMS 0 0 0 -1 0 10 3 {I|L}D 2 -1 7.0783 0.0 0.0 0.43371 0.0 0.0 1189.8199705484988 211.07381616763908 1400.8937867161378 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D 0.43371 - 5 + 1 1.769 22145.1 1.0 14895 5897 20784 HBL1_DMSO_200M_050219_1,20794 HBL1_DMSO_200M_050219_1,20794, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20795 101.88 498.0 1269600.0 25 0 40514.0 + -1 VATWMLEV 8 116 948.4861422381972 0 948.4801513552666 PEAK CID FTMS 0 0 0 20784 117831.1953125 0.0110038068239813 -3 0.3052215576171875 11 CCND2|p.P53L|1|0.15|ENSG00000118971|chr12:4274198-4274198|C/T|missense_variant;nc|ENSG00000118971|P30279-2|CCND2;ENSG00000110092|ENST00000227507|CCND1;ENSG00000118971|ENST00000261254|CCND2 3 VE{I|L}VMAE 7 -1 48.931 0.0 0.0 2.5822 0.0 0.0 965.4864604754996 155.0619295709594 1120.548390046459 0.0 0.0 0.0 0.0 0 0.0 0.0 2.5010912013506124 0.0 VE{I|L}VMAE 2.5822 - 4846 + 1 1.769 398218.3 1.0 14896 5897 20784 HBL1_DMSO_200M_050219_1,20795 HBL1_DMSO_200M_050219_1,20795, False False VATWMLEV 101.87628 948.480151355267 93454088.0 20784.0 CCND2|p.P53L|1|0.15|ENSG00000118971|chr12:4274198-4274198|C/T|missense_variant;;nc|ENSG00000118971|P30279-2|CCND2;;ENSG00000110092|ENST00000227507|CCND1;;ENSG00000118971|ENST00000261254|CCND2 6.097960948944092 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20796 101.89 800.0 31165.0 25 0 2370.7 -1 0 61 786.7277709841728 0 786.7277709841728 PEAK CID FTMS 0 0 0 -1 0 12 3 E{I|L}{I|L}G{I|L} 5 -1 19.949 0.0 0.0 1.2694 0.0 0.0 917.0840076892456 126.02065454654532 1043.104662235791 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}{I|L}G{I|L} 1.2694 - 55 + 1 1.769 27157.5 0.5 14897 5897 20784 HBL1_DMSO_200M_050219_1,20796 HBL1_DMSO_200M_050219_1,20796, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20797 101.9 288.0 281450.0 25 0 27160.0 + 34551 SPDPFPVPIL 10 109 541.3008786965996 1080.5872044599992 2 541.3004638552666 MULTI CID FTMS 0 0 0 20784 106366.9140625 0.409316389665635 6 -0.7941131591796875 13 Unmodified _SPDPFPVPIL_ ENST00000525974.5_1_16:66583481-66583592:-|nuORF;ENST00000527800.5_1_16:66583301-66583592:-|nuORF 14.838274106304384 0.5985701837916485 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]PVV 7 6 18.473 0.0 0.0 1.7095 0.0 0.0 0.0 338.20894823925886 338.20894823925886 1.7065099758261937 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]PVV 1.7095 - 203 1 1.769 73189.2 1.0 14898 5897 20784 HBL1_DMSO_200M_050219_1,20797 HBL1_DMSO_200M_050219_1,20797,SPDPFPVPIL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20798 101.91 800.0 62973.0 25 0 4042.0 -1 0 109 886.3918334841728 0 886.3918334841728 PEAK CID FTMS 0 0 0 -1 0 14 3 {M(Oxidation (M))|F}N 2 -1 9.464 0.0 0.0 0.53445 0.0 0.0 885.3473743884643 621.2871187799436 1506.634493168408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}N 0.53445 - 76 + 1 1.769 40031.8 0.4799999892711639 14899 5897 20784 HBL1_DMSO_200M_050219_1,20798 HBL1_DMSO_200M_050219_1,20798, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20799 101.92 510.0 252920.0 25 0 38634.0 + 34558 SPFGQIMEI 9 143 511.2542044054071 1020.4938558776142 2 511.2548095583916 MULTI CID FTMS 0 0 0 20784 94353.5703125 0.5490292158973148 -1 0.0383758544921875 15 Unmodified _SPFGQIMEI_ ENSG00000116001|ENST00000433529|TIA1;ENSG00000151923|ENST00000436547|TIAL1;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1;nc|ENSG00000151923|Q01085-2|TIAL1 92.4914307365334 0.0139747738690111 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SGQ{I|L}M{[QN]|[E{I|L}]|[KN]} 9 2 + 67.647 0.0 0.0 6.6288 6.6288 83.372 0.0 0.0 0.0 3.357921019231938 5.642492736872597 3.357921019231938 3.357921019231938 0 0.566901560044258 1.3979400086720375 1.7658715643802765 0.6237125054200234 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SGQ{I|L}M{[QN]|[E{I|L}]|[KN]};[PS]{M(Oxidation (M))|F}GQ{I|L}M{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GQS{I|L}M{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NAS{I|L}M{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSQ{I|L}M{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}MGQ{I|L}M{[QN]|[E{I|L}]|[KN]};[MT]VGQ{I|L}M{[QN]|[E{I|L}]|[KN]};[Q{I|L}]GMS{I|L}M{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SG[AG]{I|L}M{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGAS{I|L}M{[QN]|[E{I|L}]|[KN]} 6.6288;6.2998;5.8176;5.6451;5.4014;5.3366;5.259;5.1486;5.1153;4.789 -;+;-;-;-;-;-;-;-;- + 2047 1 1.769 103249.6 1.0 14900 5897 20784 HBL1_DMSO_200M_050219_1,20799 HBL1_DMSO_200M_050219_1,20799,SPFGQIMEI True True SPFGQIMEI 101.91948 511.254809558392 1930277.0 20784.0 nc|ENSG00000151923|Q01085-2|TIAL1;;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;;ENSG00000151923|ENST00000436547|TIAL1;;nc|ENSG00000116001|P31483-2|TIA1;;ENSG00000116001|ENST00000433529|TIA1;;ENST00000482876.5_1_2:70442329-70444102:-|nuORF 3.4589482148488364 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20800 101.93 800.0 42869.0 25 0 2785.8 + -1 LQIEDFEARIAL 12 73 709.2591430544853 0 709.2591430544853 PEAK CID FTMS 0 0 0 -1 0 16 3 Carbamidomethyl (C) _VTRGC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CWES_ ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13;ENSG00000186010|ENST00000507754|NDUFA13 1.3295316138638542 0.4761840153648598 3 {I|L}EN 3 -1 16.198 0.0 0.0 1.1435 0.0 0.0 240.88214598944984 816.4431246393186 1057.3252706287683 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}EN 1.1435 - 19 + 1 1.769 32666.3 0.4399999976158142 14901 5897 20784 HBL1_DMSO_200M_050219_1,20800 HBL1_DMSO_200M_050219_1,20800,VTRGCCCCWES False False LQIEDFEARIAL 101.9333 709.259143054485 448750.03125 20784.0 ENST00000586674.1_1_19:19627047-19643527:+|nuORF;;nc|ENSG00000186010|Q9P0J0-2|NDUFA13;;ENSG00000186010|ENST00000507754|NDUFA13 3.962435245513916 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20802 101.94 12.0 6615300.0 25 0 596260.0 -1 0 74 872.4175932028735 3485.641266945094 4 872.9196044802666 MULTI CID FTMS 0 0 0 20801 7891645.5 0.333094552789923 5 -0.6330795288085938 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 40.583 0.0 0.0 1.1643 0.0 0.0 0.0 2445.026617857456 2445.026617857456 0.6175158172435147 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.1643 - 183 1 1.76 64880.3 1.0 14902 5898 20801 HBL1_DMSO_200M_050219_1,20802 HBL1_DMSO_200M_050219_1,20802, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20803 101.94 8.2 7813200.0 25 0 996650.0 + 25612 NFPEHIFPAL 10 70 592.8085477936168 1183.6025426540334 2 592.8088256716728 MULTI CID FTMS 0 0 0 20801 7458292.5 0.6835806839663172 3 -0.406585693359375 2 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 34.221707139014875 0.2185845369562963 3 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 8 8 47.344 0.0 0.0 4.0 0.0 0.0 0.0 126.03557764224844 126.03557764224844 14.604093769761874 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3494850021680094 0.3494850021680094 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 4 - 553 + 1 1.76 56249.5 1.0 14903 5898 20801 HBL1_DMSO_200M_050219_1,20803 HBL1_DMSO_200M_050219_1,20803,NFPEHIFPAL False True NFPEHIFPAL 101.93895 592.808825671673 1178822064.0 20801.0 ENSG00000138071|ENST00000260641|ACTR2;;nc|ENSG00000138071|P61160-2|ACTR2 8.47610855102539 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20804 101.94 34.0 2474600.0 25 0 511590.0 + 26039 NMLPQIFRV 9 64 559.3127733918171 1116.6109938504342 2 559.3132812380791 MULTI CID FTMS 0 0 0 20801 1523477.875 1.0 0 0.0 3 Unmodified _NMLPQIFRV_ ENSG00000047621|ENST00000261250|C12orf4;ENST00000544258.1_3_12:4598975-4611546:-|nuORF 61.357469665136826 0.0253304979873734 3 [MN]{I|L}PQ{I|L}{M(Oxidation (M))|F}[RV] 9 0 + 65.155 0.0 0.0 5.8351 5.8351 87.216 0.0 0.0 0.0 49.63570107941663 2.922152515121219 2.922152515121219 9.208187539523747 0 1.0 1.6989700043360187 0.0 0.7742275032520141 + + [MN]{I|L}PQ{I|L}{M(Oxidation (M))|F}[RV];[MN]{I|L}P[AG]{I|L}{M(Oxidation (M))|F}[RV] 5.8351;5.0104 +;- + 60 + 1 1.76 69409.8 1.0 14904 5898 20801 HBL1_DMSO_200M_050219_1,20804 HBL1_DMSO_200M_050219_1,20804,NMLPQIFRV True True NMLPQIFRV 101.94013 559.313281238079 40423128.0 20801.0 ENST00000544258.1_3_12:4598975-4611546:-|nuORF;;ENSG00000047621|ENST00000261250|C12orf4 7.460782686869304 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20805 101.95 359.0 1675600.0 25 0 83107.0 -1 0 198 1162.8876223461473 3485.641037638642 3 1163.222827136517 MULTI CID FTMS 0 0 0 20801 1060008.75 0.2475138489860422 6 -0.7769241333007812 4 3 H{I|L}VEA{I|L}Y{I|L}V 9 -1 95.667 0.0 0.0 2.7446 0.0 0.0 0.0 2445.0334751675714 2445.0334751675714 28.466109103708988 0.0 0.0 0.0 0 3.3807196863200843 0.0 0.0 0.0 H{I|L}VEA{I|L}Y{I|L}V 2.7446 - 17310 + 1 1.76 356328.8 1.0 14905 5898 20801 HBL1_DMSO_200M_050219_1,20805 HBL1_DMSO_200M_050219_1,20805, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20806 101.95 116.0 900750.0 25 0 63638.0 -1 0 99 847.1560457046531 3384.5950769522124 4 847.6581298708916 MULTI CID FTMS 0 0 0 20801 903103.3125 0.6331279700220509 3 -0.406585693359375 5 3 QNH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 6 -1 50.718 0.0 0.0 1.4985 0.0 0.0 2601.2000472080194 0.0 2601.2000472080194 0.0 1.856734291156954 0.0 0.0 0 1.0 0.0 0.0 1.2302046884880935 QNH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.4985 - 281 1 1.76 77018.7 1.0 14906 5898 20801 HBL1_DMSO_200M_050219_1,20806 HBL1_DMSO_200M_050219_1,20806, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20807 101.95 69.0 1181000.0 25 0 182360.0 + 29742 QPPPPPLWI 9 90 522.7979655352746 1043.581378137349 2 522.7977783083916 MULTI CID FTMS 0 0 0 20801 862663.5 0.2517422184266204 4 -0.5056304931640625 6 Unmodified _QPPPPPLWI_ ENSG00000135045|ENST00000376854|C9orf40 44.40701690623563 0.0526327925666318 3 [QP]PP 4 5 29.284 0.0 0.0 2.8061 0.0 0.0 0.0 621.3411348932249 621.3411348932249 3.1373523609802056 0.0 0.0 0.0 0 0.8996498648046138 0.8860566476931632 0.0 0.0 + [QP]PP 2.8061 + + 165 + 1 1.76 68570.6 1.0 14907 5898 20801 HBL1_DMSO_200M_050219_1,20807 HBL1_DMSO_200M_050219_1,20807,QPPPPPLWI True True QPPPPPLWI 101.95075 522.797778308392 156555376.0 20801.0 ENSG00000135045|ENST00000376854|C9orf40 5.042720953623454 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20808 101.95 75.0 1092600.0 25 0 168100.0 + 5008 DGVLIWKI 8 71 472.28437759940016 942.5542022656005 2 472.2843810915947 MULTI CID FTMS 0 0 0 20801 845213.375 1.0 0 0.0 7 Unmodified _DGVLIWKI_ ENSG00000076604|ENST00000262395|TRAF4 48.345845343767074 0.1470278396477103 3 [DG]V{I|L}{I|L}WK{I|L} 8 0 [DG]V + + 47.816 17.905 6.6041 5.073 5.073 55.895 0.0 0.0 0.0 0.0 29.9112311346552 0.0 0.0 0 1.5 0.0 0.0 0.5649093276264391 + + [DG]V{I|L}{I|L}WK{I|L} 5.073 + + 102 + 1 1.76 68238.4 1.0 14908 5898 20801 HBL1_DMSO_200M_050219_1,20808 HBL1_DMSO_200M_050219_1,20808,DGVLIWKI False True DGVLIWKI 101.95248 472.284381091595 15051812.0 20801.0 ENSG00000076604|ENST00000262395|TRAF4 4.347374677658081 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20809 101.95 84.0 738620.0 25 0 118200.0 + 9793 FPANVMDVI 9 79 503.257265842538 1004.499978751876 2 503.2574951052666 MULTI CID FTMS 0 0 0 20801 769015.125 0.8791798807814372 3 -0.406585693359375 8 Unmodified _FPANVMDVI_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF 53.57557251787612 0.0325303259649373 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANV[MD]V{I|L} 9 0 + 44.089 0.0 0.0 4.3892 4.3892 73.75 0.0 0.0 0.0 2.0205343810444987 12.350680276396346 2.0205343810444987 2.0205343810444987 0 0.7429928190999391 1.5228787452803376 0.0 1.1307196863200843 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANV[MD]V{I|L};[DV]MN[PA]{M(Oxidation (M))|F}V{I|L};[PA]NVMD{M(Oxidation (M))|F}V{I|L};[DV][WK][MD]V{I|L};[PA]N{M(Oxidation (M))|F}V[MD]V{I|L};[PA]NV{M(Oxidation (M))|F}[MD]V{I|L};{[NV]|[RG]}[PA]MD{M(Oxidation (M))|F}V{I|L};[VS]{[QD]|[EN]|[WG]|[KD]|[RS]}V[MD]V{I|L};[DV]MGG[PA]{M(Oxidation (M))|F}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AGGV[MD]V{I|L} 4.3892;4.188;4.0813;3.1723;2.9696;2.8903;2.814;2.7994;2.4257;2.3468 +;-;-;-;-;-;-;-;-;- + 462 1 1.76 54204.5 1.0 14909 5898 20801 HBL1_DMSO_200M_050219_1,20809 HBL1_DMSO_200M_050219_1,20809,FPANVMDVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20810 101.96 305.0 381410.0 25 0 86279.0 + 10125 FPWPKVLKI 9 95 376.570766370445 1126.6904697115351 3 376.5706970095634 MULTI CID FTMS 0 0 0 20801 272089.375 0.6061052001696872 10 -1.0141830444335938 9 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 24.99096001346401 0.2132109383330889 3 PV{I|L}K{I|L}{[MG]|[TS]}{I|L}E 9 7 35.328 0.0 0.0 3.1355 0.0 0.0 128.09549147773595 0.0 128.09549147773595 0.0 20.201812293369848 0.0 0.0 0 0.0 0.0 0.0 0.0 PV{I|L}K{I|L}{[MG]|[TS]}{I|L}E 3.1355 - 235 1 1.76 104169.3 1.0 14910 5898 20801 HBL1_DMSO_200M_050219_1,20810 HBL1_DMSO_200M_050219_1,20810,FPWPKVLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20811 101.96 268.0 438230.0 25 0 65677.0 + 39064 TVVNFLIRV 9 112 530.8293433705809 1059.6441338079617 2 530.8294555544853 MULTI CID FTMS 0 0 0 20801 237525.6875 0.472508335140275 3 -0.406585693359375 10 Unmodified _TVVNFLIRV_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 52.268347100219714 0.0353964759249114 3 {[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}{I|L}RV 9 0 + 79.148 0.0 0.0 7.4693 7.4693 89.752 0.0 0.0 0.0 27.147642715192504 6.990925311194189 6.990925311194189 6.990925311194189 0 0.805462187404089 2.0 0.0 1.25 + + {[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}{I|L}RV;{[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}[RV]{I|L};{[TV]|[{I|L}S]}VGG{M(Oxidation (M))|F}{I|L}{I|L}RV;{[TV]|[{I|L}S]}VGG{M(Oxidation (M))|F}{I|L}[RV]{I|L};{[TV]|[{I|L}S]}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}RV;{[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}[RV]{I|L}{I|L};{[TV]|[{I|L}S]}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]{I|L};{[TV]|[{I|L}S]}VGG{M(Oxidation (M))|F}[RV]{I|L}{I|L};{[TV]|[{I|L}S]}VVM[{I|L}T]V[KA];{[TV]|[{I|L}S]}[YR][KA]P{I|L}{I|L} 7.4693;6.8096;6.6003;5.9406;5.6998;5.4638;5.0401;4.5948;2.9806;2.5777 +;-;-;-;-;-;-;-;-;- + 344 + 1 1.76 97825.6 1.0 14911 5898 20801 HBL1_DMSO_200M_050219_1,20811 HBL1_DMSO_200M_050219_1,20811,TVVNFLIRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20812 101.97 102.0 443920.0 25 0 72139.0 + -1 SIIQEFPEI 9 76 538.2874374983045 537.2801610317044 1 538.2873412966728 MULTI CID FTMS 0 0 0 20801 215820.9375 1.0 0 0.0 11 ENST00000462237.5_1_X:74514443-74523343:+|nuORF;ENSG00000094841|ENST00000373383|UPRT;ENST00000373379.5_1_X:74520846-74523343:+|nuORF 3 [EP]{I|L} 3 -1 24.226 0.0 0.0 4.5089 0.0 0.0 0.0 195.0767057917232 195.0767057917232 4.304009240123886 0.0 0.0 0.0 0 0.3054621874040891 1.2218487496163564 0.0 0.0 [EP]{I|L} 4.5089 - 44 1 1.76 44256.1 1.0 14912 5898 20801 HBL1_DMSO_200M_050219_1,20812 HBL1_DMSO_200M_050219_1,20812, False False SIIQEFPEI 101.96709 538.287341296673 1835565.625 20801.0 ENST00000462237.5_1_X:74514443-74523343:+|nuORF;;ENSG00000094841|ENST00000373383|UPRT;;ENST00000373379.5_1_X:74520846-74523343:+|nuORF 2.1143267154693604 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20813 101.98 597.0 170030.0 25 0 13978.0 + 35281 SSLLQVPLV 9 130 478.2947500870897 0 478.2947570681572 PEAK CID FTMS 0 0 0 20801 137945.578125 1.0 0 0.0 12 Unmodified _SSLLQVPLV_ ENSG00000242372|ENST00000374450|EIF6;nc|ENSG00000242372|P56537-2|EIF6 64.23631603340823 0.0129441640563295 3 VQ{I|L}SD 5 8 36.393 0.0 0.0 3.8125 0.0 0.0 327.2148531021107 82.06707941226796 409.2819325143786 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.6968199613955393 0.0 VQ{I|L}SD 3.8125 - 246 + 1 1.76 82523.0 1.0 14913 5898 20801 HBL1_DMSO_200M_050219_1,20813 HBL1_DMSO_200M_050219_1,20813,SSLLQVPLV True True SSLLQVPLV 101.97751 478.294757068157 390441.6875 20801.0 nc|ENSG00000242372|P56537-2|EIF6;;ENSG00000242372|ENST00000374450|EIF6 6.391552766164144 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20814 101.99 800.0 203920.0 25 0 18987.0 -1 0 134 1160.14971220928 0 1160.483081042767 PEAK CID FTMS 0 0 0 20801 111121.859375 0.7560444067451018 1 -0.1544418334960937 13 3 S 1 -1 9.6041 0.0 0.0 0.41428 0.0 0.0 989.6152522418118 1238.5816134088502 2228.196865650662 0.0 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.0 S 0.41428 - 33 + 1 1.76 102896.0 0.6399999856948853 14914 5898 20801 HBL1_DMSO_200M_050219_1,20814 HBL1_DMSO_200M_050219_1,20814, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20815 102.01 800.0 81685.0 25 0 5797.3 -1 0 93 695.0391292318593 2082.0955582957777 3 695.0388061404228 MULTI CID FTMS 0 0 0 20801 118520.6953125 1.0 0 0.0 14 3 [{I|L}T][HS]{I|L}A[Y{M(Oxidation (M))|F}]{I|L}DVG 12 -1 39.574 0.0 0.0 1.9007 0.0 0.0 0.0 762.4175286548356 762.4175286548356 32.58409987942095 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 [{I|L}T][HS]{I|L}A[Y{M(Oxidation (M))|F}]{I|L}DVG 1.9007 - 524 1 1.76 59622.7 0.4900000095367431 14915 5898 20801 HBL1_DMSO_200M_050219_1,20815 HBL1_DMSO_200M_050219_1,20815, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20816 102.02 800.0 256980.0 25 0 28657.0 + 23874 LVLDALMRV 9 162 515.3119378269871 1028.609322720774 2 515.3109008669853 MULTI CID FTMS 0 0 0 20801 110411.6171875 1.0 0 0.0 15 Unmodified _LVLDALMRV_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 38.17557092003332 0.0854718145212029 3 {I|L}VVEA{I|L}MRV 9 2 + 78.002 0.0 0.0 7.5833 7.5833 81.678 0.0 0.0 0.0 34.97302484056647 6.98116367241937 6.98116367241937 0.796896906561031 0 0.6549471895720985 2.0 0.3807196863200844 0.2396518287104437 {I|L}VVEA{I|L}MRV;{I|L}V{I|L}DA{I|L}MRV;{I|L}VVEA{I|L}[VS]S{I|L};{I|L}V{I|L}DA{I|L}[VS]S{I|L};{I|L}V{I|L}W{I|L}MRV;{I|L}VVEA{I|L}[TA]T{I|L};{I|L}V{I|L}DA{I|L}[TA]T{I|L};{I|L}VVEA{I|L}{[CA]|SS}V{I|L};{I|L}VV{I|L}{[CP]|[EA]}MRV;{I|L}V{I|L}DA{I|L}{[CA]|SS}V{I|L} 7.5833;7.5058;6.9046;6.8271;6.6522;6.5116;6.4341;6.4249;6.3705;6.3474 -;+;-;-;-;-;-;-;-;- + 2165 + 1 1.76 158863.2 0.9300000071525574 14916 5898 20801 HBL1_DMSO_200M_050219_1,20816 HBL1_DMSO_200M_050219_1,20816,LVLDALMRV True True LVLDALMRV 102.01904 515.310900866985 702453.75 20801.0 nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;;ENSG00000100991|ENST00000252015|TRPC4AP;;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP 4.384185155232747 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20817 102.03 800.0 67747.0 25 0 1189.2 -1 0 114 1180.953784167767 0 1180.953784167767 PEAK CID FTMS 0 0 0 -1 0 16 3 G 1 -1 5.4846 0.0 0.0 0.23241 0.0 0.0 2077.7582630603406 222.0887240045532 2299.8469870648937 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.23241 - 45 + 1 1.76 38149.5 0.7400000095367432 14917 5898 20801 HBL1_DMSO_200M_050219_1,20817 HBL1_DMSO_200M_050219_1,20817, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20818 102.05 617.0 156210.0 25 0 12600.0 + 25949 NLPDEEIFQQL 11 120 673.3352424362749 1344.6559319393498 2 673.3358642458916 MULTI CID FTMS 0 0 0 20801 108676.1171875 0.0360811350517029 6 -0.7769241333007812 17 Unmodified _NLPDEEIFQQL_ ENSG00000169019|ENST00000381571|COMMD8 45.739877483867886 0.1412225664835785 3 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F} 8 6 50.264 0.0 0.0 3.738 0.0 0.0 0.0 384.1905748438998 384.1905748438998 21.455180804793585 0.0 0.0 0.0 0 0.2614393726401688 0.619788758288394 0.7302046884880937 0.6549471895720984 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F} 3.738 - 3037 1 1.76 76022.1 1.0 14918 5898 20801 HBL1_DMSO_200M_050219_1,20818 HBL1_DMSO_200M_050219_1,20818,NLPDEEIFQQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20819 102.06 800.0 116060.0 25 0 8949.1 + 34960 SQLDPLVVEL 10 134 556.8144391537868 1111.6143253743735 2 556.8141357302666 MULTI CID FTMS 0 0 0 20801 100908.7734375 1.0 0 0.0 18 Unmodified _SQLDPLVVEL_ ENSG00000123552|ENST00000500704|USP45;nc|ENSG00000123552|Q70EL2-2|USP45 43.9818466556824 0.1155196613165264 3 {NN|[MP]|[D{I|L}]|[EV]}QS[{I|L}P]VV{[QN]|[E{I|L}]|[KN]} 10 4 + 48.979 0.0 0.0 4.4061 4.4061 74.059 0.0 0.0 0.0 5.228086960298036 5.764837301042718 5.228086960298036 2.2177870036582235 0 0.6382104921644451 1.3010299956639813 1.1382104921644451 0.0 {NN|[MP]|[D{I|L}]|[EV]}QS[{I|L}P]VV{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}PV[QT]VV{[QN]|[E{I|L}]|[KN]};[{I|L}P]VD[QT]VV{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}PV{I|L}{[QS]|[NT]}V{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}P{I|L}{[QS]|[NT]}VV{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}P[TA]RVV{[QN]|[E{I|L}]|[KN]};[{I|L}P]VVE{[QS]|[NT]}V{[QN]|[E{I|L}]|[KN]};[{I|L}P]DV[QT]VV{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}NS[{I|L}P]VV{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}[AG]S[{I|L}P]VV{[QN]|[E{I|L}]|[KN]} 4.4061;4.2066;3.9358;3.8245;3.8234;3.8234;3.7121;3.665;3.6309;3.5817 -;-;-;-;-;-;-;-;-;- 1530 1 1.76 76407.6 0.4000000059604645 14919 5898 20801 HBL1_DMSO_200M_050219_1,20819 HBL1_DMSO_200M_050219_1,20819,SQLDPLVVEL True True SQLDPLVVEL 102.05901 556.814135730267 354859.03125 20801.0 nc|ENSG00000123552|Q70EL2-2|USP45;;ENSG00000123552|ENST00000500704|USP45 4.686850627263387 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20820 102.07 800.0 131520.0 25 0 14278.0 + 34008 SLISTYFHV 9 132 533.782999591004 1065.551446248808 2 533.7825195193291 MULTI CID FTMS 0 0 0 20801 100228.90625 0.274106000330398 3 -0.406585693359375 19 Unmodified _SLISTYFHV_ ENST00000336838.10_1_2:55646279-55646603:-|nuORF 44.40701690623563 0.0526327925666318 3 {[TV]|[{I|L}S]}{I|L}STY{M(Oxidation (M))|F}HV 9 0 + 53.822 0.0 0.0 5.0511 5.0511 83.361 0.0 0.0 0.0 24.76203644159419 8.723637474483468 8.723637474483468 8.723637474483468 0 0.4247425010840047 2.0 0.2742275032520141 0.0 + + {[TV]|[{I|L}S]}{I|L}STY{M(Oxidation (M))|F}HV;{[TV]|[{I|L}S]}{I|L}QYR{[WT]|[RM]};{[TV]|[{I|L}S]}{I|L}QYK[WE];{[TV]|[{I|L}S]}{I|L}QY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SV;{[TV]|[{I|L}S]}{I|L}Q{[CT]|[{M(Oxidation (M))|F}G]}[R{M(Oxidation (M))|F}]V;{[TV]|[{I|L}S]}{I|L}QY[VG]{[WT]|[RM]};{[TV]|[{I|L}S]}{I|L}[AG]YR{[WT]|[RM]};{[TV]|[{I|L}S]}{I|L}S[WK]{M(Oxidation (M))|F}SV;{[TV]|[{I|L}S]}{I|L}Q[DP]{[SA]|[TG]}HV;{[TV]|[{I|L}S]}{I|L}ST{[NV]|[RG]}{M(Oxidation (M))|F}SV 5.0511;4.2324;3.6194;3.4542;3.3632;3.3632;3.3632;3.2972;3.2748;3.2543 +;-;-;-;-;-;-;-;-;- + 739 + 1 1.76 87937.1 0.3899999856948852 14920 5898 20801 HBL1_DMSO_200M_050219_1,20820 HBL1_DMSO_200M_050219_1,20820,SLISTYFHV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20821 102.09 800.0 179270.0 25 0 15683.0 + 34736 SPYPWPLNHI 10 123 612.3146212862029 0 612.3151122927666 PEAK CID FTMS 0 0 0 20801 93730.921875 0.1258314431701278 24 -1.4247207641601562 20 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 81.89019881105858 0.0002212351683707 3 YPW{I|L}PN 6 6 44.206 0.0 0.0 3.6157 0.0 0.0 184.08266710886124 265.1313482327814 449.21401534164266 0.0 0.0 0.0 0.0 0 1.1861818737241734 0.0 0.0 1.3494850021680094 YPW{I|L}PN 3.6157 - 351 + 1 1.76 111776.9 0.4300000071525574 14921 5898 20801 HBL1_DMSO_200M_050219_1,20821 HBL1_DMSO_200M_050219_1,20821,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20823 102.09 17.0 7867200.0 25 0 1048800.0 + 11933 GMPDFLEKL 9 89 525.2702477700904 1048.5259426069806 2 525.2707397341728 MULTI CID FTMS 0 0 0 20822 3351396.75 0.921310852820902 1 -0.1569442749023437 1 Unmodified _GMPDFLEKL_ ENSG00000084090|ENST00000337288|STARD7 45.69961567697781 0.0497987121815769 3 {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L} 9 0 + 55.526 0.0 0.0 5.2956 5.2956 80.517 0.0 0.0 0.0 7.147642715192504 4.6002345915110965 4.6002345915110965 4.6002345915110965 0 0.3807196863200844 0.0 0.7614393726401688 0.25 + + {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L};[DP]{M(Oxidation (M))|F}{I|L}EK{I|L}{[MG]|[TS]};[DP]{M(Oxidation (M))|F}{I|L}TR{I|L}{[MG]|[TS]};[DP]{M(Oxidation (M))|F}E{I|L}K{I|L}{[MG]|[TS]};[DP]{M(Oxidation (M))|F}{I|L}T[VG]{I|L}{[MG]|[TS]};{[MG]|[TS]}{I|L}[MD]{I|L}EK{I|L};{[{M(Oxidation (M))|F}D]|MM}P{I|L}EK{I|L}{[MG]|[TS]};{[{M(Oxidation (M))|F}D]|MM}P{I|L}TR{I|L}{[MG]|[TS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}ER{I|L}{[MG]|[TS]};{[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}{I|L}{I|L}[SG] 5.2956;4.8568;4.804;4.3262;3.9258;3.8704;2.857;2.8041;2.5506;2.3512 +;-;-;-;-;-;-;-;-;- + 492 + 1 1.768 109734.5 1.0 14922 5899 20822 HBL1_DMSO_200M_050219_1,20823 HBL1_DMSO_200M_050219_1,20823,GMPDFLEKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20824 102.1 660.0 252600.0 25 0 13953.0 + 26706 NYPAFMMEM 9 155 567.2268020774719 1132.4390512217435 2 567.2269164919853 MULTI CID FTMS 0 0 0 20822 44146.4296875 0.0933487687115718 1 -0.1569442749023437 2 Unmodified _NYPAFMMEM_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 100.37149154755038 0.0107586824602606 3 [YN]PA{M(Oxidation (M))|F}MMEM 9 0 + 51.171 0.0 0.0 4.5186 4.5186 78.683 0.0 0.0 0.0 5.184465535402303 5.184465535402303 5.184465535402303 5.184465535402303 0 1.256872151062397 1.6989700043360187 0.0 2.055462187404089 + + [YN]PA{M(Oxidation (M))|F}MMEM;{[YD]|[{M(Oxidation (M))|F}M]}MM{M(Oxidation (M))|F}APQM;[YN]P[WY]MEM;{[YD]|[{M(Oxidation (M))|F}M]}M[WY]PQM;[PA]{M(Oxidation (M))|F}M[YN]MEM;[PA]{M(Oxidation (M))|F}[YN]MMEM;[KG]{M(Oxidation (M))|F}MEMMEM;{[YD]|[{M(Oxidation (M))|F}M]}MME[WK]M;[YN]{[YD]|[{M(Oxidation (M))|F}M]}[W{I|L}]EM;[YN]{[YD]|[{M(Oxidation (M))|F}M]}{[WN]|[YH]}QM 4.5186;4.0608;3.1745;2.7167;2.5398;2.3832;2.3296;2.2301;2.1829;2.0383 +;-;-;-;-;-;-;-;-;- + 1865 1 1.768 128612.6 1.0 14923 5899 20822 HBL1_DMSO_200M_050219_1,20824 HBL1_DMSO_200M_050219_1,20824,NYPAFMMEM True True YLIELIDRV 102.1037 567.226916491985 106653.640625 20822.0 ENSG00000151694|ENST00000310823|ADAM17;;nc|ENSG00000151694|P78536-2|ADAM17 3.646742026011149 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20825 102.11 441.0 1036600.0 25 0 138600.0 + 12724 GVLTLLYS 8 102 433.25471604321433 864.4948791532287 2 433.2546264529228 MULTI CID FTMS 0 0 0 20822 210816.359375 0.228767067776005 -1 0.1544418334960937 3 Unmodified _GVLTLLYS_ REV__ENSG00000204657|ENST00000641840|OR2H2;REV__ENSG00000204688|ENST00000377133|OR2H1 14.581692164780916 0.6954967302934248 3 T 1 -1 16.594 0.0 0.0 1.9195 0.0 0.0 596.3848243337483 164.0392244928344 760.4240488265826 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.3494850021680094 0.0 T 1.9195 + + 35 + 1 1.768 353157.0 1.0 14924 5899 20822 HBL1_DMSO_200M_050219_1,20825 HBL1_DMSO_200M_050219_1,20825,GVLTLLYS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20826 102.12 224.0 528970.0 25 0 45804.0 + 13558 HPFSFTPLI 9 95 529.7873316325754 1057.560110331951 2 529.7872192263603 MULTI CID FTMS 0 0 0 20822 167563.796875 0.5519445033464336 -1 0.1544418334960937 4 Unmodified _HPFSFTPLI_ ENSG00000086200|ENST00000325324|IPO11;ENST00000507640.1_1_5:61778930-61779155:+|nuORF;nc|ENSG00000086200|Q9UI26-2|IPO11 74.39630413441286 0.0193995060682538 3 {[TV]|[{I|L}S]}MH{M(Oxidation (M))|F}TP{I|L}{I|L} 9 4 + 60.517 0.0 0.0 5.7223 5.7223 75.874 0.0 0.0 0.0 0.6133359628858415 14.933787369250169 0.6133359628858415 0.6133359628858415 0 0.7742275032520141 1.3979400086720375 1.8494850021680087 0.0 {[TV]|[{I|L}S]}MH{M(Oxidation (M))|F}TP{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HS{M(Oxidation (M))|F}TP{I|L}{I|L};[{I|L}P]EE{M(Oxidation (M))|F}TP{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SH{M(Oxidation (M))|F}TP{I|L}{I|L};{[TV]|[{I|L}S]}M{M(Oxidation (M))|F}HTP{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F}HTP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PH{M(Oxidation (M))|F}TP{I|L}{I|L};{[TV]|[{I|L}S]}M{M(Oxidation (M))|F}THP{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F}THP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{M(Oxidation (M))|F}HTP{I|L}{I|L} 5.7223;5.6643;5.5391;5.4292;4.5849;4.2918;4.1907;3.8824;3.5892;3.0533 -;-;-;-;-;-;-;-;-;- 700 1 1.768 109493.3 1.0 14925 5899 20822 HBL1_DMSO_200M_050219_1,20826 HBL1_DMSO_200M_050219_1,20826,HPFSFTPLI True True HPFSFTPLI 102.11575 529.78721922636 7797992.5 20822.0 ENST00000507640.1_1_5:61778930-61779155:+|nuORF;;ENSG00000086200|ENST00000325324|IPO11;;nc|ENSG00000086200|Q9UI26-2|IPO11 9.14144484202067 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20827 102.13 553.0 541130.0 25 0 123030.0 + 3983 DALRLYLI 8 131 488.7950198249538 975.5754867167076 2 488.7949096560478 MULTI CID FTMS 0 0 0 20822 164139.546875 0.6351878481387392 -1 0.1544418334960937 5 Unmodified _DALRLYLI_ ENSG00000196305|ENST00000443024|IARS1 74.92900055777586 0.1049409103209122 3 {[DA]|[EG]}{I|L}R{I|L}Y{I|L}{I|L} 8 0 + 86.358 0.0 0.0 8.852 8.852 96.374 0.0 0.0 0.0 17.147771124465223 14.904630595263413 14.904630595263413 14.203555389302522 0 1.774227503252014 1.5228787452803376 0.7689301784845296 1.0114393726401687 + + {[DA]|[EG]}{I|L}R{I|L}Y{I|L}{I|L};{[DA]|[EG]}{I|L}RY{I|L}{I|L}{I|L};[{I|L}A]DR{I|L}Y{I|L}{I|L};[{I|L}A]RD{I|L}Y{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}AR{I|L}Y{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GR{I|L}Y{I|L}{I|L};[{I|L}A]DRY{I|L}{I|L}{I|L};[{I|L}A]RDY{I|L}{I|L}{I|L};[{I|L}A]R{I|L}DY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}G[VG]{I|L}Y{I|L}{I|L} 8.852;7.3961;7.0943;6.8394;5.9894;5.9587;5.6384;5.3835;5.347;5.0093 +;-;-;-;-;-;-;-;-;- + 578 1 1.768 229490.5 1.0 14926 5899 20822 HBL1_DMSO_200M_050219_1,20827 HBL1_DMSO_200M_050219_1,20827,DALRLYLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20828 102.14 618.0 170930.0 25 0 10771.0 -1 0 108 698.135186505527 3485.639550194635 5 698.3369018435478 MULTI CID FTMS 0 0 0 20822 148357.234375 0.2947204454759929 6 -0.7062911987304688 6 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 33.567 0.0 0.0 0.963 0.0 0.0 0.0 2445.03088255231 2445.03088255231 3.077505373956776 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 0.963 - 924 1 1.768 84296.3 1.0 14927 5899 20822 HBL1_DMSO_200M_050219_1,20828 HBL1_DMSO_200M_050219_1,20828, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20829 102.15 800.0 285890.0 25 0 14812.0 -1 0 225 851.1592285037041 0 851.1592285037041 PEAK CID FTMS 0 0 0 -1 0 7 3 G 1 -1 5.4846 0.0 0.0 0.32256 0.0 0.0 949.9372181384643 690.3190333657059 1640.2562515041702 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.32256 - 475 + 1 1.768 141833.9 0.5899999737739563 14928 5899 20822 HBL1_DMSO_200M_050219_1,20829 HBL1_DMSO_200M_050219_1,20829, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20830 102.16 800.0 188260.0 25 0 9563.4 + 21727 LPLTSEMLI 9 158 1016.5674267134488 1015.5601502468488 1 1017.578662097454 MULTI CID FTMS 0 0 0 20822 138428.953125 0.5402789401877945 -2 0.3154754638671875 8 Unmodified _LPLTSEMLI_ ENSG00000103995|ENST00000380950|CEP152;nc|ENSG00000103995|O94986-3|CEP152 42.09456458481378 0.0639583784996157 3 [{I|L}T]P{I|L}SEM{I|L}{I|L} 9 2 + 53.207 0.0 0.0 5.2392 5.2392 74.265 0.0 0.0 0.0 0.657205584423366 6.373249492148915 0.657205584423366 0.657205584423366 0 0.0 1.6989700043360187 0.9876954943324544 0.0 [{I|L}T]P{I|L}SEM{I|L}{I|L};[{I|L}P]T{I|L}SEM{I|L}{I|L};[{I|L}T]P{I|L}{M(Oxidation (M))|F}{[CP]|[EA]}{I|L}{I|L};[{I|L}T]P{I|L}{M(Oxidation (M))|F}[NS][KP];[{I|L}P]T{I|L}{M(Oxidation (M))|F}{[CP]|[EA]}{I|L}{I|L};[{I|L}P]T{I|L}{M(Oxidation (M))|F}[NS][KP];[{I|L}T]P{I|L}S{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[KP];[{I|L}P]T{I|L}S{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[KP];[{I|L}T]P{I|L}{M(Oxidation (M))|F}{I|L}{[CP]|[EA]}{I|L};[{I|L}P]{I|L}TSEM{I|L}{I|L} 5.2392;5.1745;4.3603;4.3402;4.2956;4.2755;4.217;4.1523;3.9684;3.9146 -;-;-;-;-;-;-;-;-;+ + 5547 1 1.768 99406.0 0.6600000262260437 14929 5899 20822 HBL1_DMSO_200M_050219_1,20830 HBL1_DMSO_200M_050219_1,20830,LPLTSEMLI True True LPLTSEMLI 102.16397 1017.57866209745 4318603.5 20822.0 nc|ENSG00000103995|O94986-3|CEP152;;ENSG00000103995|ENST00000380950|CEP152 1.8394209146499636 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20831 102.18 800.0 93055.0 25 0 1498.8 -1 0 122 1178.182792314741 0 1178.180468738079 PEAK CID FTMS 0 0 0 20822 139771.515625 1.0 0 0.0 9 3 R 1 -1 5.4846 0.0 0.0 0.23295 0.0 0.0 1020.7424634363196 1174.5017794244752 2195.2442428607947 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.23295 - 65 + 1 1.768 45707.0 0.699999988079071 14930 5899 20822 HBL1_DMSO_200M_050219_1,20831 HBL1_DMSO_200M_050219_1,20831, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20832 102.18 157.0 1051100.0 25 0 91282.0 + 22661 LPYSIRVLL 9 105 537.3397841670214 1072.6650154008428 2 537.3401367068291 MULTI CID FTMS 0 0 0 20822 130160.03125 0.2629410589758715 -1 0.1544418334960937 10 Unmodified _LPYSIRVLL_ ENSG00000136381|ENST00000258886|IREB2;nc|ENSG00000136381|P48200-2|IREB2 89.40071534611396 0.0152361884002446 3 {I|L}PYS{I|L}RV{I|L}{I|L} 9 0 + 98.769 0.0 0.0 9.2079 9.2079 93.429 0.0 0.0 0.0 56.98104871308642 14.09256854528806 14.09256854528806 8.69325543266271 0 2.172167511924052 1.6989700043360187 1.0387254899964358 0.3807196863200844 + + {I|L}PYS{I|L}RV{I|L}{I|L};{I|L}PY{I|L}SRV{I|L}{I|L};{I|L}P{I|L}YSRV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}RV{I|L}{I|L}{I|L};[{I|L}P]YSRV{I|L}{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}RV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SRV{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}R{I|L}V{I|L}{I|L};[{I|L}P]YSR{I|L}V{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SR{I|L}V{I|L}{I|L} 9.2079;8.3974;7.2814;6.9901;6.8474;6.8346;6.6619;6.4403;6.2976;6.1121 +;-;-;-;-;-;-;-;-;- + 1037 + 1 1.768 139509.6 1.0 14931 5899 20822 HBL1_DMSO_200M_050219_1,20832 HBL1_DMSO_200M_050219_1,20832,LPYSIRVLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20833 102.19 657.0 282460.0 25 0 2990.8 -1 MRKWPRQYEWF 11 165 821.9022281640407 0 821.9013549685478 PEAK CID FTMS 0 0 0 20822 100370.1953125 1.0 0 0.0 11 Oxidation (M) _M(Oxidation (M))RKWPRQYEWF_ ENSG00000175874|ENST00000324768|CREG2 0.2690200627634905 0.4761840153648598 3 {I|L}Q 2 -1 8.5835 0.0 0.0 0.52281 0.0 0.0 898.4286690286107 499.1962984674438 1397.6249674960543 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Q 0.52281 - 230 + 1 1.768 120558.1 1.0 14932 5899 20822 HBL1_DMSO_200M_050219_1,20833 HBL1_DMSO_200M_050219_1,20833,MRKWPRQYEWF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20834 102.21 800.0 359860.0 25 0 18453.0 20350 LLFYHFWRYFH 11 260 814.9113987801086 0 814.9592162966728 PEAK CID FTMS 0 0 0 20822 22438.837890625 0.7160073825133602 -1 0.1544418334960937 12 Unmodified _LLFYHFWRYFH_ ENSG00000143786|ENST00000272133|CNIH3 0.3070304955306653 0.4761840153648598 3 GN[{I|L}A]QGY{M(Oxidation (M))|F} 8 9 17.459 0.0 0.0 1.0725 0.0 0.0 642.3683165037734 132.04612146549064 774.414437969264 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 GN[{I|L}A]QGY{M(Oxidation (M))|F} 1.0725 - 1267 + 1 1.768 184587.0 0.5099999904632568 14933 5899 20822 HBL1_DMSO_200M_050219_1,20834 HBL1_DMSO_200M_050219_1,20834,LLFYHFWRYFH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20835 102.22 800.0 101520.0 25 0 9029.4 -1 MECDACGMQPA 11 106 586.1999999880791 0 586.1999999880791 PEAK CID FTMS 0 0 0 -1 0 13 Oxidation (M) _MECDACGM(Oxidation (M))QPA_ CON__ENSEMBL:ENSBTAP00000006074 8.155526934196011 0.4672964927559179 3 E 1 -1 9.732 0.0 0.0 0.83152 0.0 0.0 131.03794639280324 907.280886641806 1038.3188330346093 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E 0.83152 + + 24 + 1 1.768 65853.5 0.449999988079071 14934 5899 20822 HBL1_DMSO_200M_050219_1,20835 HBL1_DMSO_200M_050219_1,20835,MECDACGMQPA False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_1 20836 102.24 800.0 213730.0 25 0 21727.0 + 1820 ALTELLAKI 9 165 486.3103788438592 970.6062047545184 2 486.3099853396416 MULTI CID FTMS 0 0 0 20822 101269.4765625 0.0029747542771089 32 -1.3768310546875 14 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 53.832793166522166 0.0319663582346103 3 [{I|L}A]TE{I|L}{I|L}AK{I|L} 9 0 + 61.116 0.0 0.0 6.2967 6.2967 89.948 0.0 0.0 0.0 26.72798483315929 12.587418566968154 12.587418566968154 10.955612550363796 0 1.2856668758921828 1.5228787452803376 0.0 0.0 + + [{I|L}A]TE{I|L}{I|L}AK{I|L};{[TV]|[{I|L}S]}[DV]{I|L}{I|L}AK{I|L};{[TV]|[{I|L}S]}{I|L}[DV]{I|L}AK{I|L} 6.2967;5.168;4.0556 +;-;- + 1810 + 1 1.768 130295.5 0.3899999856948852 14935 5899 20822 HBL1_DMSO_200M_050219_1,20836 HBL1_DMSO_200M_050219_1,20836,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20837 102.24 200.0 509140.0 25 0 43006.0 + + 7629 TLQEVLLTV 9 114 508.3055034248316 1014.5964539164632 2 508.3051940798759 MULTI CID FTMS 0 0 0 20822 91200.75 0.4821180110581936 -1 0.1544418334960937 15 Unmodified _EIVQTLISI_ ENSG00000100450|ENST00000216338|GZMH 67.83816525789305 0.0219346420158844 3 [{I|L}T]QEV{I|L} 6 -1 57.655 0.0 0.0 5.6826 0.0 0.0 0.0 328.18727257671964 328.18727257671964 20.65835178357824 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 1.360924374808178 0.3807196863200844 [{I|L}T]QEV{I|L} 5.6826 - 1269 1 1.768 80185.4 1.0 14936 5899 20822 HBL1_DMSO_200M_050219_1,20837 HBL1_DMSO_200M_050219_1,20837,EIVQTLISI False False TLQEVLLTV 102.24153 508.305194079876 1709644.75 20822.0 ENSG00000100450|ENST00000216338|GZMH 3.6109071572621674 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20838 102.24 167.0 709120.0 25 0 80577.0 + 1575 ALLEPGGVLTI 11 144 541.826563988685 1081.63857504417 2 541.8267700076103 MULTI CID FTMS 0 0 0 20822 90165.0 0.6338825570252197 -1 0.1544418334960937 16 Unmodified _ALLEPGGVLTI_ ENSG00000112159|ENST00000369393|MDN1 56.17704186161178 0.0846604386095034 3 [VP]N{I|L}T{I|L}A{I|L}E{I|L} 10 9 + 39.122 0.0 0.0 3.6169 3.6169 76.966 0.0 0.0 0.0 6.09668402151199 3.345906903990951 3.345906903990951 6.154239528859442 0 0.3182503180159344 0.8538719643217619 0.4247425010840047 0.0 [VP]N{I|L}T{I|L}A{I|L}E{I|L};{[NV]|[RG]}P{I|L}T{I|L}A{I|L}E{I|L};[VP]NT{I|L}{I|L}A{I|L}E{I|L};[VP]N{I|L}EA{I|L}{I|L}[{I|L}T];[VP]N{I|L}AE{I|L}{I|L}[{I|L}T];[VP]GG{I|L}T{I|L}A{I|L}E{I|L};[NP]V{I|L}T{I|L}A{I|L}E{I|L};{[NV]|[RG]}PT{I|L}{I|L}A{I|L}E{I|L};{[NV]|[RG]}P{I|L}EA{I|L}{I|L}[{I|L}T];[VP]NE{I|L}A{I|L}{I|L}[{I|L}T] 3.6169;3.0479;2.9423;2.9298;2.8237;2.7696;2.7379;2.3733;2.3608;2.3059 -;-;-;-;-;-;-;-;-;- 3118 1 1.768 97381.9 1.0 14937 5899 20822 HBL1_DMSO_200M_050219_1,20838 HBL1_DMSO_200M_050219_1,20838,ALLEPGGVLTI True True ALLEPGGVLTI 102.24481 541.82677000761 1330447.375 20822.0 ENSG00000112159|ENST00000369393|MDN1 4.287740151087443 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20840 102.25 26.0 4810800.0 25 0 346820.0 -1 0 137 872.4175932028735 3485.641266945094 4 872.6692382693291 MULTI CID FTMS 0 0 0 20839 2885360.25 0.1299898611557246 7 -0.6548385620117188 1 3 [YQ]{I|L}H{I|L}E 6 -1 39.385 0.0 0.0 1.1299 0.0 0.0 0.0 2699.2348704625188 2699.2348704625188 5.307262395435963 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [YQ]{I|L}H{I|L}E 1.1299 - 1551 + 1 1.776 93992.8 1.0 14938 5900 20839 HBL1_DMSO_200M_050219_1,20840 HBL1_DMSO_200M_050219_1,20840, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20841 102.25 31.0 3271300.0 25 0 408710.0 + 25613 NFPEHIFPAL 10 105 592.8085477936168 1183.6025426540334 2 592.8088256716728 MULTI CID FTMS 0 0 0 20839 1401852.625 0.1284850890760153 5 -0.549346923828125 2 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 53.31671820480216 0.0606844387689228 3 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 8 8 59.302 0.0 0.0 5.0103 0.0 0.0 0.0 126.03553186588124 126.03553186588124 31.989700043360187 0.0 0.0 0.0 0 0.8807196863200843 0.0 1.0114393726401687 0.75 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 5.0103 - 1863 + 1 1.776 83581.8 1.0 14939 5900 20839 HBL1_DMSO_200M_050219_1,20841 HBL1_DMSO_200M_050219_1,20841,NFPEHIFPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20842 102.26 611.0 783110.0 25 0 37012.0 -1 0 181 1162.8876223461473 3485.641037638642 3 1163.556689441204 MULTI CID FTMS 0 0 0 20839 487689.65625 0.1269604176818194 8 -0.7027969360351562 3 3 NVQM{[ES]|[DT]|[{I|L}C]}{I|L}VM{I|L} 10 -1 61.943 0.0 0.0 1.7771 0.0 0.0 136.05088264282887 2201.899972783849 2337.9508554266786 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 1.274227503252014 NVQM{[ES]|[DT]|[{I|L}C]}{I|L}VM{I|L} 1.7771 - 10832 + 1 1.776 280869.7 1.0 14940 5900 20839 HBL1_DMSO_200M_050219_1,20842 HBL1_DMSO_200M_050219_1,20842, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20843 102.26 130.0 732060.0 25 0 86035.0 + 17324 KLVEFDFLGA 10 111 569.8109912520542 1137.6074295709084 2 569.8110839724541 MULTI CID FTMS 0 0 0 20839 432099.625 0.864617130266772 -2 0.3113861083984375 4 Unmodified _KLVEFDFLGA_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 29.28111348798908 0.310803607902986 3 [{I|L}V]KE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q 9 4 + 77.4 0.0 0.0 6.8038 6.8038 87.074 0.0 0.0 0.0 7.2074977865926115 9.208187539523747 7.2074977865926115 6.197887582883936 0 0.9247425010840048 1.0 1.1989700043360187 0.0 [{I|L}V]KE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q;[{I|L}V]{I|L}[SG]{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q;[{I|L}V]K{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}{I|L}Q;[K{I|L}]VE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q;{I|L}{I|L}V[SG]{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q;[K{I|L}]V{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}{I|L}Q;[{I|L}V]{I|L}[YQ]D{M(Oxidation (M))|F}{I|L}Q;[{I|L}V]K{M(Oxidation (M))|F}DE{M(Oxidation (M))|F}{I|L}Q;{I|L}{I|L}V[YQ]D{M(Oxidation (M))|F}{I|L}Q;[{I|L}V]{I|L}[YN]E{M(Oxidation (M))|F}{I|L}Q 6.8038;6.259;6.1894;6.1702;5.8942;5.5558;5.3776;5.1393;5.0128;4.6347 -;-;-;-;-;-;-;-;-;- 1470 1 1.776 79429.4 1.0 14941 5900 20839 HBL1_DMSO_200M_050219_1,20843 HBL1_DMSO_200M_050219_1,20843,KLVEFDFLGA False True KLVEFDFLGA 102.26383 569.811083972454 10363163.0 20839.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 7.400209585825602 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20844 102.27 132.0 920130.0 25 0 24457.0 -1 0 117 847.1560457046531 3384.5950769522124 4 847.4057494997978 MULTI CID FTMS 0 0 0 20839 302106.96875 0.1952610813439805 5 -0.549346923828125 5 3 [YQ]G 3 -1 15.942 0.0 0.0 0.47102 0.0 0.0 0.0 3033.4276324544185 3033.4276324544185 -0.8280519203522356 0.0 -0.8280519203522356 0.0 0 0.5 0.0 0.0 0.3494850021680094 [YQ]G 0.47102 - 265 1 1.776 80707.7 1.0 14942 5900 20839 HBL1_DMSO_200M_050219_1,20844 HBL1_DMSO_200M_050219_1,20844, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20845 102.27 239.0 510520.0 25 0 83362.0 + 5009 DGVLIWKI 8 92 472.28437759940016 942.5542022656005 2 472.2845031619072 MULTI CID FTMS 0 0 0 20839 274043.4375 0.3242298875121326 2 -0.194244384765625 6 Unmodified _DGVLIWKI_ ENSG00000076604|ENST00000262395|TRAF4 67.34385681178166 0.1158486345035644 3 [DG]V{I|L}{I|L}WK{I|L} 8 0 [DG]V + + 46.955 17.905 6.6041 4.9817 4.9817 55.576 0.0 0.0 0.0 0.0 29.050448966913205 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.5501648626366046 + + [DG]V{I|L}{I|L}WK{I|L} 4.9817 + + 180 + 1 1.776 98246.2 1.0 14943 5900 20839 HBL1_DMSO_200M_050219_1,20845 HBL1_DMSO_200M_050219_1,20845,DGVLIWKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20846 102.28 287.0 331550.0 25 0 35380.0 + 2454 AQVMWFEKL 9 123 576.2994147228134 1150.5842765124266 2 576.3004028201103 MULTI CID FTMS 0 0 0 20839 195598.3125 1.0 0 0.0 7 Unmodified _AQVMWFEKL_ ENSG00000197136|ENST00000355703|PCNX3;ENST00000439247.2_1_11:65394334-65404446:+|nuORF;nc|ENSG00000197136|Q9H6A9-3|PCNX3 47.594388314883695 0.0456443387682827 3 [QA]V{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}EK{I|L} 10 2 + 56.987 0.0 0.0 4.9529 4.9529 86.019 0.0 0.0 0.0 13.67600778328903 11.136218907515314 11.136218907515314 13.26606256887672 0 0.9247425010840048 0.958607314841775 1.1549471895720984 0.1989700043360188 [QA]V{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}EK{I|L};[QA]{I|L}V{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}EK{I|L};[QA]{I|L}[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}EK{I|L};[QA]V{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}AVS{I|L};[QA]V{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}AVTV;[QA]V{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{[ET]|[MV]}{[WT]|[RM]};[QA]V{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{[ET]|[MV]}SS{I|L};[QA]{I|L}V{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}AVS{I|L};[QA]V{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{[WT]|[RM]}MV;[QA]{I|L}[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}AVS{I|L} 4.9529;3.7999;3.4705;3.0279;2.6577;2.04;1.8749;1.8749;1.5927;1.5417 -;-;-;-;-;-;-;-;-;- 868 + 1 1.776 77260.5 1.0 14944 5900 20839 HBL1_DMSO_200M_050219_1,20846 HBL1_DMSO_200M_050219_1,20846,AQVMWFEKL True True AQVMWFEKL 102.27629 576.30040282011 1611440.0 20839.0 ENSG00000197136|ENST00000355703|PCNX3;;ENST00000439247.2_1_11:65394334-65404446:+|nuORF;;nc|ENSG00000197136|Q9H6A9-3|PCNX3 8.546667416890463 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20847 102.29 800.0 303740.0 25 0 28650.0 + 30057 QVAFQHQLDV 10 156 1184.609144003446 1183.6018675368462 1 1185.967456042767 MULTI CID FTMS 0 0 0 20839 137059.59375 0.4610569929406115 3 -0.3216934204101562 8 Unmodified _QVAFQHQLDV_ REV__ENSG00000132326|ENST00000254657|PER2 10.315234532428624 0.6744623947628824 3 AP{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 7 -1 30.588 0.0 0.0 2.5843 0.0 0.0 130.08496162897728 213.10407434635 343.18903597532733 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 AP{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 2.5843 - 2722 + 1 1.776 138675.5 0.7699999809265137 14945 5900 20839 HBL1_DMSO_200M_050219_1,20847 HBL1_DMSO_200M_050219_1,20847,QVAFQHQLDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20848 102.3 282.0 388150.0 25 0 43146.0 30472 REALISGWL 9 119 522.7938634290937 1043.5731739249873 2 522.7971069216728 MULTI CID FTMS 0 0 0 -1 0 9 Unmodified _REALISGWL_ ENSG00000074370|ENST00000397041|ATP2A3;ENST00000572176.1_1_17:3838413-3839645:-|nuORF;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3 21.74664581756881 0.2544899275067181 3 [{I|L}P]PPPW 6 7 28.918 0.0 0.0 2.771 0.0 0.0 0.0 353.1751201485005 353.1751201485005 1.8616146380199616 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}P]PPPW 2.771 - 704 1 1.776 88051.9 1.0 14946 5900 20839 HBL1_DMSO_200M_050219_1,20848 HBL1_DMSO_200M_050219_1,20848,REALISGWL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20849 102.31 778.0 230600.0 25 0 36101.0 + 26040 NMLPQIFRV 9 136 559.3127733918171 1116.6109938504342 2 559.3131591677666 MULTI CID FTMS 0 0 0 20839 146472.609375 0.0961435750256629 2 -0.194244384765625 10 Unmodified _NMLPQIFRV_ ENSG00000047621|ENST00000261250|C12orf4;ENST00000544258.1_3_12:4598975-4611546:-|nuORF 71.13359017698441 0.0206607516130725 3 [MN]{I|L}PQ{I|L}{M(Oxidation (M))|F}RV 9 0 + 66.693 0.0 0.0 5.9728 5.9728 87.695 0.0 0.0 0.0 53.19824245790308 5.745110090880914 5.745110090880914 9.208187539523747 0 0.9247425010840048 2.0 0.0 1.055462187404089 + + [MN]{I|L}PQ{I|L}{M(Oxidation (M))|F}RV;[MN]{I|L}P[AG]{I|L}{M(Oxidation (M))|F}RV;[MN]{I|L}VT{[RE]|[WV]}RV;[MN]{I|L}VRRK[NS] 5.9728;5.1482;4.6329;3.6383 +;-;-;- + 559 + 1 1.776 137334.0 1.0 14947 5900 20839 HBL1_DMSO_200M_050219_1,20849 HBL1_DMSO_200M_050219_1,20849,NMLPQIFRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20850 102.32 480.0 152290.0 25 0 18083.0 + 9794 FPANVMDVI 9 93 503.2571594119072 0 503.2571594119072 PEAK CID FTMS 0 0 0 -1 0 11 Unmodified _FPANVMDVI_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF 36.04419817259434 0.0811646137502998 3 {M(Oxidation (M))|F}DMV 4 6 11.586 0.0 0.0 1.1534 0.0 0.0 230.1617847218708 279.1104830377563 509.2722677596271 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {M(Oxidation (M))|F}DMV 1.1534 - 41 + 1 1.776 59784.0 1.0 14948 5900 20839 HBL1_DMSO_200M_050219_1,20850 HBL1_DMSO_200M_050219_1,20850,FPANVMDVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20851 102.32 193.0 235480.0 25 0 3535.8 -1 0 104 1103.591601550579 0 1103.591601550579 PEAK CID FTMS 0 0 0 -1 0 12 3 H 1 -1 5.4846 0.0 0.0 0.24871 0.0 0.0 1351.479332396277 713.5925997369749 2065.071932133252 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.24871 - 25 + 1 1.776 36135.0 1.0 14949 5900 20839 HBL1_DMSO_200M_050219_1,20851 HBL1_DMSO_200M_050219_1,20851, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20852 102.33 212.0 342600.0 25 0 14960.0 -1 0 136 924.7344707064944 0 924.9704467654228 PEAK CID FTMS 0 0 0 -1 0 13 3 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.24921 0.0 0.0 1565.3205211475604 132.04604517154533 1697.3665663191057 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.24921 - 35 + 1 1.776 49341.9 1.0 14950 5900 20839 HBL1_DMSO_200M_050219_1,20852 HBL1_DMSO_200M_050219_1,20852, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20853 102.34 800.0 192530.0 25 0 39531.0 + 10126 FPWPKVLKI 9 135 376.570766370445 1126.6904697115351 3 376.5705139040947 MULTI CID FTMS 0 0 0 20839 94552.0625 0.2106237950968106 12 -0.9108963012695312 14 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 41.95555342248728 0.0647214845423414 3 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 49.89 0.0 0.0 4.428 4.428 76.984 0.0 0.0 0.0 11.678870203480535 3.991569240362836 3.991569240362836 3.991569240362836 0 0.25 0.0 0.0 0.6022338482433752 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K;{M(Oxidation (M))|F}PWPK{I|L}VK{I|L};{M(Oxidation (M))|F}PWPK{I|L}V{I|L}K;{M(Oxidation (M))|F}PW{I|L}[KP]VK{I|L};{M(Oxidation (M))|F}{I|L}PW[KP]VK{I|L};{M(Oxidation (M))|F}P{I|L}W[KP]VK{I|L};{M(Oxidation (M))|F}PW{I|L}[KP]V{I|L}K;{M(Oxidation (M))|F}{I|L}PW[KP]V{I|L}K;{M(Oxidation (M))|F}P{I|L}W[KP]V{I|L}K 4.428;4.0737;3.8936;3.5393;2.9201;2.6274;2.5821;2.5658;2.2732;2.2279 +;-;-;-;-;-;-;-;-;- + 364 + 1 1.776 127959.1 0.8500000238418579 14951 5900 20839 HBL1_DMSO_200M_050219_1,20853 HBL1_DMSO_200M_050219_1,20853,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20855 102.36 800.0 236380.0 25 0 64858.0 + 38950 TVNGLRDE 8 99 452.2293820285097 902.4442111238194 2 452.2299377322197 MULTI CID FTMS 0 0 0 20854 30413.03125 0.3188035184064295 1 -0.0990447998046875 1 Unmodified _TVNGLRDE_ REV__ENSG00000141622|ENST00000269439|RNF165;REV__nc|ENSG00000141622|Q6ZSG1-2|ARK2C 7.910154910731844 0.7763180056447161 3 V 1 -1 11.109 0.0 0.0 1.231 0.0 0.0 785.3648176685444 0.0 785.3648176685444 0.0 0.3123468415207497 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.231 + + 33 + 1 1.8 153489.0 0.3899999856948852 14952 5901 20854 HBL1_DMSO_200M_050219_1,20855 HBL1_DMSO_200M_050219_1,20855,TVNGLRDE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20856 102.36 155.0 1431400.0 25 0 127660.0 + 11789 GLLPDVPSL 9 164 910.5244993430716 909.5172228764716 1 910.5242797732352 MULTI CID FTMS 0 0 0 20854 542514.375 0.451505204603941 2 -0.2264938354492187 2 Unmodified _GLLPDVPSL_ ENSG00000125505|ENST00000245615|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;nc|ENSG00000125505|Q96N66-3|MBOAT7 78.14939416004806 0.0179651292570206 3 [DP]V{I|L}G{I|L}PS{I|L} 9 6 + 53.63 0.0 0.0 5.8965 5.8965 76.199 0.0 0.0 0.0 11.57136260906973 7.096142931993441 7.096142931993441 0.4845500650402812 0 0.7059771852360797 1.3979400086720375 0.6549471895720985 0.0 [DP]V{I|L}G{I|L}PS{I|L};[DP]V{I|L}AVPS{I|L};[DP]VG{I|L}{I|L}PS{I|L};[DP]{I|L}VG{I|L}PS{I|L};[DP]{I|L}VAVPS{I|L};[DP]{I|L}R{I|L}PS{I|L};{[VA]|[{I|L}G]}{I|L}PDVPS{I|L};{[VA]|[{I|L}G]}{I|L}VDPPS{I|L};[PS]VTP{I|L}PS{I|L};{[VA]|[{I|L}G]}VDP{I|L}PS{I|L} 5.8965;5.8432;5.7591;5.2983;5.245;5.1106;4.6242;4.045;3.9724;3.9666 -;-;-;-;-;-;+;-;-;- + 1415 1 1.8 142056.4 1.0 14953 5901 20854 HBL1_DMSO_200M_050219_1,20856 HBL1_DMSO_200M_050219_1,20856,GLLPDVPSL True True GLLPDVPSL 102.36034 910.524279773235 14560876.0 20854.0 nc|ENSG00000125505|Q96N66-3|MBOAT7;;ENSG00000125505|ENST00000245615|MBOAT7;;nc|ENSG00000125505|Q96N66-2|MBOAT7 5.935696125030518 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20857 102.37 256.0 440910.0 25 0 7073.9 -1 0 143 1080.498095691204 0 1080.498095691204 PEAK CID FTMS 0 0 0 -1 0 3 3 {I|L} 1 -1 3.9794 0.0 0.0 0.18432 0.0 0.0 1357.5647205798707 685.3155611627561 2042.8802817426267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.18432 - 135 + 1 1.8 74428.0 1.0 14954 5901 20854 HBL1_DMSO_200M_050219_1,20857 HBL1_DMSO_200M_050219_1,20857, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20858 102.38 761.0 155300.0 25 0 6703.1 -1 0 114 1098.233810914056 0 1098.145556628704 PEAK CID FTMS 0 0 0 20854 104527.3671875 0.824242741974285 -1 0.0951995849609375 4 3 G 1 -1 5.4846 0.0 0.0 0.24993 0.0 0.0 1096.9550963380746 1037.4308565729127 2134.385952910988 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.24993 - 40 + 1 1.8 71693.2 1.0 14955 5901 20854 HBL1_DMSO_200M_050219_1,20858 HBL1_DMSO_200M_050219_1,20858, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20859 102.38 251.0 188860.0 25 0 3009.5 -1 0 95 1180.5672425046134 0 1180.568408191204 PEAK CID FTMS 0 0 0 20854 276413.46875 1.0 0 0.0 5 3 T 1 -1 3.4949 0.0 0.0 0.14814 0.0 0.0 1700.1673696754394 554.8890474908811 2255.0564171663204 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.14814 - 5 + 1 1.8 35431.4 1.0 14956 5901 20854 HBL1_DMSO_200M_050219_1,20859 HBL1_DMSO_200M_050219_1,20859, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20860 102.4 800.0 847140.0 25 0 32427.0 -1 0 327 890.5225883827001 0 890.4442016482353 PEAK CID FTMS 0 0 0 20854 136504.28125 1.0 0 0.0 6 3 QGY{M(Oxidation (M))|F} 4 -1 18.928 0.0 0.0 1.0639 0.0 0.0 1148.7554906308312 132.04615198306877 1280.8016426139 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QGY{M(Oxidation (M))|F} 1.0639 - 3066 + 1 1.8 433472.8 0.8799999952316284 14957 5901 20854 HBL1_DMSO_200M_050219_1,20860 HBL1_DMSO_200M_050219_1,20860, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20861 102.41 800.0 274160.0 25 0 5700.7 -1 0 139 937.6547906924384 0 938.1099731326104 PEAK CID FTMS 0 0 0 20854 67257.671875 1.0 0 0.0 7 3 {I|L} 1 -1 6.9897 0.0 0.0 0.37312 0.0 0.0 1336.917424795599 420.2699645393847 1757.1873893349834 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.37312 - 99 + 1 1.8 134938.1 0.8500000238418579 14958 5901 20854 HBL1_DMSO_200M_050219_1,20861 HBL1_DMSO_200M_050219_1,20861, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20862 102.42 176.0 292700.0 25 0 5295.9 -1 0 125 1033.003832995892 0 1033.003832995892 PEAK CID FTMS 0 0 0 -1 0 8 3 MPA 3 -1 6.6824 0.0 0.0 0.32376 0.0 0.0 1610.7907032458872 151.05202661685783 1761.842729862745 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MPA 0.32376 - 32 + 1 1.8 39812.3 1.0 14959 5901 20854 HBL1_DMSO_200M_050219_1,20862 HBL1_DMSO_200M_050219_1,20862, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20863 102.42 146.0 397660.0 25 0 5036.4 -1 0 108 897.6018258239484 0 897.5001098513603 PEAK CID FTMS 0 0 0 -1 0 9 3 T 1 -1 3.8515 0.0 0.0 0.21479 0.0 0.0 1467.029230405906 222.0892733209594 1689.1185037268654 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 T 0.21479 - 18 + 1 1.8 43241.2 1.0 14960 5901 20854 HBL1_DMSO_200M_050219_1,20863 HBL1_DMSO_200M_050219_1,20863, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20864 102.42 200.0 274290.0 25 0 5371.7 -1 0 81 1103.3373006378652 0 1103.304858386517 PEAK CID FTMS 0 0 0 -1 0 10 3 A 1 -1 4.6041 0.0 0.0 0.20883 0.0 0.0 1293.2078106243569 837.3776949518186 2130.585505576176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.20883 - 34 + 1 1.8 38094.8 1.0 14961 5901 20854 HBL1_DMSO_200M_050219_1,20864 HBL1_DMSO_200M_050219_1,20864, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20865 102.44 800.0 370910.0 25 0 47413.0 + 40384 VIATVIVITL 10 178 521.3499685973635 1040.685384261527 2 521.3500244021416 MULTI CID FTMS 0 0 0 20854 136598.078125 1.0 0 0.0 11 Unmodified _VIATVIVITL_ ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-11|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP 88.90359156742426 0.0097709727222801 3 [{I|L}V]{[SA]|[TG]}{I|L}{I|L}T{I|L}{I|L}V 10 5 + 79.636 0.0 0.0 7.6523 7.6523 83.808 0.0 0.0 0.0 6.7609125905568135 14.146518864155126 6.7609125905568135 1.958092733705428 0 0.5 2.0 1.701163485412895 0.0 [{I|L}V]{[SA]|[TG]}{I|L}{I|L}T{I|L}{I|L}V;[{I|L}V]{I|L}GT{I|L}T{I|L}{I|L}V;[{I|L}V]{[SA]|[TG]}{I|L}T{I|L}{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}K{I|L}{I|L}T{I|L}{I|L}V;[{I|L}V]{I|L}GTT{I|L}{I|L}{I|L}V;[{I|L}V]{[SA]|[TG]}{I|L}{I|L}{I|L}T{I|L}V;[VG]T{I|L}{I|L}{I|L}T{I|L}{I|L}V;[{I|L}V]{I|L}GT{I|L}{I|L}T{I|L}V;{[QN]|[E{I|L}]|[KN]}K{I|L}T{I|L}{I|L}{I|L}V;{[TV]|[{I|L}S]}G{I|L}{I|L}{I|L}T{I|L}{I|L}V 7.6523;7.4641;7.0898;7.0026;6.9017;6.6448;6.6018;6.4567;6.4402;6.3588 -;-;-;-;-;-;-;-;-;- 8629 1 1.8 234367.3 0.5099999904632568 14962 5901 20854 HBL1_DMSO_200M_050219_1,20865 HBL1_DMSO_200M_050219_1,20865,VIATVIVITL True True VILEKILTI 102.43606 521.350024402142 1181941.25 20854.0 nc|ENSG00000112282|Q9ULK4-6|MED23;;nc|ENSG00000112282|Q9ULK4-2|MED23;;nc|ENSG00000112282|Q9ULK4-3|MED23;;nc|ENSG00000112282|Q9ULK4-5|MED23;;ENSG00000112282|ENST00000368068|MED23;;nc|ENSG00000112282|Q9ULK4-4|MED23 3.010728677113851 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20866 102.44 151.0 236140.0 25 0 15025.0 -1 0 92 803.1622971995913 0 803.0996581912041 PEAK CID FTMS 0 0 0 -1 0 12 3 A 1 -1 4.6041 0.0 0.0 0.28698 0.0 0.0 1398.2033500370746 132.04599939517814 1530.2493494322528 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.28698 - 10 + 1 1.8 29578.1 1.0 14963 5901 20854 HBL1_DMSO_200M_050219_1,20866 HBL1_DMSO_200M_050219_1,20866, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20868 102.44 54.0 3454200.0 25 0 428490.0 + 11934 GMPDFLEKL 9 108 525.2702477700904 1048.5259426069806 2 525.2702514529228 MULTI CID FTMS 0 0 0 20867 1077057.75 0.2960869954265671 4 -0.3909759521484375 1 Unmodified _GMPDFLEKL_ ENSG00000084090|ENST00000337288|STARD7 81.89019881105858 0.0170587746866453 3 {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L} 9 0 + 69.575 0.0 0.0 6.6355 6.6355 86.769 0.0 0.0 0.0 7.147642715192504 6.434526764861879 6.434526764861879 6.434526764861879 0 0.3807196863200844 0.0 1.4049471895720984 1.0114393726401687 + + {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L};{[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}E{I|L}K;[DP]{M(Oxidation (M))|F}{I|L}EK{I|L}{[MG]|[TS]};[DP]{M(Oxidation (M))|F}{I|L}TR{I|L}{[MG]|[TS]};{[MG]|[TS]}{I|L}[MD]{I|L}EK{I|L};[DP]{M(Oxidation (M))|F}E{I|L}K{I|L}{[MG]|[TS]};{[MG]|[TS]}{I|L}[MD]{I|L}E{I|L}K;[DP]{M(Oxidation (M))|F}{I|L}T[VG]{I|L}{[MG]|[TS]};{[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}{I|L}{I|L}[SG];{[MG]|[TS]}PD[Q{I|L}]{M(Oxidation (M))|F}NK 6.6355;6.0218;4.6453;4.2822;4.2335;4.0106;3.6198;3.404;2.9649;2.7764 +;-;-;-;-;-;-;-;-;- + 848 + 1 1.827 156290.8 1.0 14964 5902 20867 HBL1_DMSO_200M_050219_1,20868 HBL1_DMSO_200M_050219_1,20868,GMPDFLEKL True True GMPDFLEKL 102.44388 525.270251452923 184031312.0 20867.0 ENSG00000084090|ENST00000337288|STARD7 6.703764915466309 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20869 102.45 213.0 867700.0 25 0 80160.0 + 22662 LPYSIRVLL 9 114 537.3397841670214 1072.6650154008428 2 537.3399536013603 MULTI CID FTMS 0 0 0 20867 327163.59375 0.6609151901150669 2 -0.2712936401367187 2 Unmodified _LPYSIRVLL_ ENSG00000136381|ENST00000258886|IREB2;nc|ENSG00000136381|P48200-2|IREB2 79.59630418116434 0.0176145593575188 3 {I|L}PYS{I|L}RV{I|L}{I|L} 9 0 + 94.205 0.0 0.0 8.7823 8.7823 97.609 0.0 0.0 0.0 61.79683137432591 14.09256854528806 14.09256854528806 26.26287494579977 0 2.079689690656103 1.6989700043360187 1.055462187404089 0.0 + + {I|L}PYS{I|L}RV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}RV{I|L}{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}RV{I|L}{I|L};[{I|L}P]YSRV{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SRV{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}R{I|L}V{I|L}{I|L};[{I|L}P]YSR{I|L}V{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SR{I|L}V{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[VG]V{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}S[VG]V{I|L}{I|L}{I|L} 8.7823;6.3339;6.2108;6.1806;5.9951;5.963;5.8096;5.6241;5.4755;5.1366 +;-;-;-;-;-;-;-;-;- + 647 + 1 1.827 153995.6 1.0 14965 5902 20867 HBL1_DMSO_200M_050219_1,20869 HBL1_DMSO_200M_050219_1,20869,LPYSIRVLL True True LPYSIRVLL 102.44793 537.33995360136 8488293.0 20867.0 ENSG00000136381|ENST00000258886|IREB2;;nc|ENSG00000136381|P48200-2|IREB2 4.85276985168457 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20870 102.45 143.0 1202100.0 25 0 134790.0 + 33764 SLAQYLINV 9 134 510.7898562985402 1019.5651596638804 2 510.7899963259697 MULTI CID FTMS 0 0 0 20867 421838.78125 0.3826879828377769 -2 0.194244384765625 3 Unmodified _SLAQYLINV_ ENSG00000197111|ENST00000546463|PCBP2;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 63.22749603027936 0.0242951379232427 3 {[TV]|[{I|L}S]}AQY{I|L}{I|L}NV 9 0 + 72.749 0.0 0.0 7.1353 7.1353 87.229 0.0 0.0 0.0 5.45732670896497 9.889917747712644 5.45732670896497 5.45732670896497 0 1.1237125054200234 2.0 1.4436726795685342 0.3252574989159953 + + {[TV]|[{I|L}S]}AQY{I|L}{I|L}NV;[Y{I|L}]QAS{I|L}{I|L}NV;{[TV]|[{I|L}S]}YAQ{I|L}{I|L}NV;{[TV]|[{I|L}S]}AYQ{I|L}{I|L}NV;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L}{I|L}NV;{[TV]|[{I|L}S]}A[AG]Y{I|L}{I|L}NV;[Y{I|L}]SAQ{I|L}{I|L}NV;[QA]Y{I|L}S{I|L}{I|L}NV;[YQ]A{I|L}S{I|L}{I|L}NV;[Y{I|L}]QA{I|L}S{I|L}NV 7.1353;6.6;6.2425;6.2244;6.1038;5.9131;5.5164;5.3777;5.3777;5.1789 +;-;-;-;-;-;-;-;-;- + 2038 1 1.827 131750.4 1.0 14966 5902 20867 HBL1_DMSO_200M_050219_1,20870 HBL1_DMSO_200M_050219_1,20870,SLAQYLINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20871 102.45 175.0 1315000.0 25 0 171010.0 35862 SVLILASY 8 79 433.25471604321433 864.4948791532287 2 433.2549926638603 MULTI CID FTMS 0 0 0 20867 377976.0625 0.4101601781000066 2 -0.2712936401367187 4 Unmodified _SVLILASY_ nc|ENSG00000176510|Q8NH08|OR10AC1 9.347437153973935 0.7675937258251505 3 T 1 8 16.906 0.0 0.0 1.9556 0.0 0.0 596.3849792152527 164.03919397525627 760.4241731905089 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.3807196863200844 0.0 T 1.9556 - 16 + 1 1.827 180658.0 1.0 14967 5902 20867 HBL1_DMSO_200M_050219_1,20871 HBL1_DMSO_200M_050219_1,20871,SVLILASY False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 20872 102.47 800.0 68038.0 25 0 1991.0 -1 0 85 1115.5169193298643 0 1115.476855456829 PEAK CID FTMS 0 0 0 -1 0 5 3 N 1 -1 6.9897 0.0 0.0 0.31358 0.0 0.0 1000.4555172712538 1111.4785860651002 2111.934103336354 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.31358 - 10 + 1 1.827 42532.4 0.8399999737739563 14968 5902 20867 HBL1_DMSO_200M_050219_1,20872 HBL1_DMSO_200M_050219_1,20872, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20873 102.47 121.0 317850.0 25 0 11226.0 -1 0 74 1149.2924784616685 0 1149.139941394329 PEAK CID FTMS 0 0 0 20867 105692.0234375 1.0 0 0.0 6 3 E 1 -1 1.9897 0.0 0.0 0.086638 0.0 0.0 1593.3303049684555 571.1761568658811 2164.5064618343367 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.086638 - 8 + 1 1.827 32253.2 1.0 14969 5902 20867 HBL1_DMSO_200M_050219_1,20873 HBL1_DMSO_200M_050219_1,20873, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20874 102.47 116.0 1155400.0 25 0 51235.0 -1 0 179 885.1850643812459 0 885.1837036013603 PEAK CID FTMS 0 0 0 20867 155997.640625 1.0 0 0.0 7 3 Y{M(Oxidation (M))|F} 2 -1 9.464 0.0 0.0 0.53518 0.0 0.0 1323.159086426751 132.04602991275627 1455.2051163395072 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.53518 - 189 + 1 1.827 88622.3 1.0 14970 5902 20867 HBL1_DMSO_200M_050219_1,20874 HBL1_DMSO_200M_050219_1,20874, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20875 102.48 160.0 1239100.0 25 0 59332.0 -1 0 203 856.3020207550774 0 856.3052856326103 PEAK CID FTMS 0 0 0 20867 249827.9375 1.0 0 0.0 8 3 Y 1 -1 6.9897 0.0 0.0 0.40861 0.0 0.0 1428.4551939986327 116.05125604801016 1544.5064500466428 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.40861 - 1099 + 1 1.827 125750.4 1.0 14971 5902 20867 HBL1_DMSO_200M_050219_1,20875 HBL1_DMSO_200M_050219_1,20875, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20876 102.48 346.0 237700.0 25 0 13992.0 + -1 VPLIIPVSV 9 91 937.6547906924384 0 937.7064086794852 PEAK CID FTMS 0 0 0 20867 32712.76171875 0.4863796323421283 1 -0.1274490356445312 9 nc|ENSG00000156030|Q6PJG2|MIDEAS;ENSG00000156030|ENST00000423556|MIDEAS 3 E 1 -1 4.2917 0.0 0.0 0.2291 0.0 0.0 781.825132066714 959.4130343072874 1741.2381663740014 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 E 0.2291 - 20 + 1 1.827 58992.6 1.0 14972 5902 20867 HBL1_DMSO_200M_050219_1,20876 HBL1_DMSO_200M_050219_1,20876, False False VPLIIPVSV 102.4825 937.706408679485 3445163.75 20867.0 nc|ENSG00000156030|Q6PJG2|MIDEAS;;ENSG00000156030|ENST00000423556|MIDEAS 3.684556007385254 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20877 102.49 304.0 149230.0 25 0 5132.7 -1 0 100 1152.032519519329 0 1152.032519519329 PEAK CID FTMS 0 0 0 -1 0 10 3 M 1 -1 3.9794 0.0 0.0 0.17286 0.0 0.0 1332.2873157947145 835.7132662408811 2168.0005820355955 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.17286 - 12 + 1 1.827 36035.1 1.0 14973 5902 20867 HBL1_DMSO_200M_050219_1,20877 HBL1_DMSO_200M_050219_1,20877, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20878 102.5 392.0 369210.0 25 0 63731.0 + + -1 SALPWNITV 9 127 500.7768659284243 999.5391789236486 2 500.7772704958916 MULTI CID FTMS 0 0 0 20867 130335.96875 1.0 0 0.0 11 Oxidation (M) _LTHM(Oxidation (M))GLISL_ nc|ENSG00000057663|Q9H1Y0-2|ATG5;ENSG00000057663|ENST00000369076|ATG5 64.23631603340823 0.0237365939569086 3 [WP]N{I|L}TG{I|L}{[TV]|[{I|L}S]} 9 -1 + 71.343 0.0 0.0 7.1376 7.1376 89.33 0.0 0.0 0.0 19.99082389439756 43.04572234712533 19.99082389439756 7.781512503836431 0 0.7742275032520141 1.5228787452803376 0.7887254899964358 0.6382104921644451 [WP]N{I|L}TG{I|L}{[TV]|[{I|L}S]};[WP]{I|L}NTG{I|L}{[TV]|[{I|L}S]};[WP]NT{I|L}G{I|L}{[TV]|[{I|L}S]};[WP]GG{I|L}TG{I|L}{[TV]|[{I|L}S]};[WP]NTG{I|L}{I|L}{[TV]|[{I|L}S]};[WP]NSA{I|L}{I|L}{[TV]|[{I|L}S]};{[WN]|[YH]}P{I|L}TG{I|L}{[TV]|[{I|L}S]};[WP]GGT{I|L}G{I|L}{[TV]|[{I|L}S]};[WP][KA]EG{I|L}{[TV]|[{I|L}S]};[WP]{I|L}GGTG{I|L}{[TV]|[{I|L}S]} 7.1376;6.3591;6.2464;5.5779;5.5744;5.1763;5.0117;4.9755;4.9728;4.7993 -;-;-;-;-;-;-;-;-;- 2160 1 1.827 112716.9 1.0 14974 5902 20867 HBL1_DMSO_200M_050219_1,20878 HBL1_DMSO_200M_050219_1,20878,LTHMGLISL False False SALPWNITV 102.49511 500.777270495892 971256.0625 20867.0 nc|ENSG00000057663|Q9H1Y0-2|ATG5;;ENSG00000057663|ENST00000369076|ATG5 0.9665807684262594 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20879 102.51 800.0 99317.0 25 0 3212.4 -1 0 140 994.8586303591728 0 994.8586303591728 PEAK CID FTMS 0 0 0 -1 0 12 3 VPV 3 -1 10.177 0.0 0.0 0.51201 0.0 0.0 1367.3473743884642 322.14255701236567 1689.4899314008298 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VPV 0.51201 - 59 + 1 1.827 57905.2 0.6899999976158142 14975 5902 20867 HBL1_DMSO_200M_050219_1,20879 HBL1_DMSO_200M_050219_1,20879, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20880 102.52 800.0 166050.0 25 0 35550.0 + 3984 DALRLYLI 8 125 488.7950198249538 975.5754867167076 2 488.7951232790947 MULTI CID FTMS 0 0 0 20867 99714.0 0.3858736197044606 2 -0.2712936401367187 13 Unmodified _DALRLYLI_ ENSG00000196305|ENST00000443024|IARS1 47.74868867922204 0.1498366402366518 3 {[DA]|[EG]}{I|L}R{I|L}Y{I|L}{I|L} 8 0 + 72.935 0.0 0.0 7.4761 7.4761 95.762 0.0 0.0 0.0 20.71333751784365 40.48266074454885 20.71333751784365 33.332567493688344 0 1.774227503252014 1.5228787452803376 0.0 0.5629529932484498 + + {[DA]|[EG]}{I|L}R{I|L}Y{I|L}{I|L};[Y{I|L}][R{I|L}]AD{I|L}{I|L};[QA][KQ]{I|L}Y{I|L}{I|L};[Y{I|L}][R{I|L}]A{I|L}D{I|L};[Y{I|L}][R{I|L}]{I|L}AD{I|L} 7.4761;4.0593;3.512;3.0578;2.5687 +;-;-;-;- + 312 1 1.827 105318.7 0.4099999964237213 14976 5902 20867 HBL1_DMSO_200M_050219_1,20880 HBL1_DMSO_200M_050219_1,20880,DALRLYLI False True DALRLYLI 102.52396 488.795123279095 4732139.5 20867.0 ENSG00000196305|ENST00000443024|IARS1 4.697741667429606 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20881 102.54 788.0 168710.0 25 0 16465.0 + 13559 HPFSFTPLI 9 139 529.7873316325754 1057.560110331951 2 530.2897827029228 MULTI CID FTMS 0 0 0 20867 99374.5625 0.6800237025657322 2 -0.2712936401367187 14 Unmodified _HPFSFTPLI_ ENSG00000086200|ENST00000325324|IPO11;ENST00000507640.1_1_5:61778930-61779155:+|nuORF;nc|ENSG00000086200|Q9UI26-2|IPO11 38.15118350030904 0.0856056900103839 3 {[TV]|[{I|L}S]}MH{M(Oxidation (M))|F}T 6 7 34.94 0.0 0.0 3.3038 0.0 0.0 0.0 338.20603455605027 338.20603455605027 10.251903433986126 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.8252574989159953 0.0 {[TV]|[{I|L}S]}MH{M(Oxidation (M))|F}T 3.3038 - 1034 1 1.827 113185.0 1.0 14977 5902 20867 HBL1_DMSO_200M_050219_1,20881 HBL1_DMSO_200M_050219_1,20881,HPFSFTPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20882 102.55 800.0 174820.0 25 0 18884.0 -1 PLRKGCHTL 9 155 541.3008786965996 1080.5872044599992 2 541.3002807497978 MULTI CID FTMS 0 0 0 20867 92985.3125 0.3578219105056199 11 -0.7554092407226562 15 Carbamidomethyl (C) _PLRKGC(Carbamidomethyl (C))HTL_ ENSG00000102001|ENST00000323022|CACNA1F;nc|ENSG00000102001|O60840-4|CACNA1F;nc|ENSG00000102001|O60840-5|CACNA1F;nc|ENSG00000102001|O60840-6|CACNA1F;nc|ENSG00000102001|O60840-7|CACNA1F;nc|ENSG00000102001|O60840|CACNA1F 24.67388899826682 0.2172451872415813 3 VQDHT{I|L} 6 -1 29.065 0.0 0.0 2.6897 0.0 0.0 369.2283267006844 0.0 369.2283267006844 0.0 8.349197894812246 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 VQDHT{I|L} 2.6897 - 1747 + 1 1.827 114316.7 0.4000000059604645 14978 5902 20867 HBL1_DMSO_200M_050219_1,20882 HBL1_DMSO_200M_050219_1,20882,PLRKGCHTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20883 102.57 800.0 84281.0 25 0 1715.3 -1 0 105 1195.160082995892 0 1195.160082995892 PEAK CID FTMS 0 0 0 -1 0 16 3 Q 1 -1 5.4846 0.0 0.0 0.22964 0.0 0.0 1758.0285877673716 499.19843469791255 2257.2270224652843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.22964 - 20 + 1 1.827 41759.0 0.4600000083446502 14979 5902 20867 HBL1_DMSO_200M_050219_1,20883 HBL1_DMSO_200M_050219_1,20883, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20885 102.57 65.0 1166200.0 25 0 71088.0 -1 0 105 872.4175932028735 3485.641266945094 4 872.9194213747978 MULTI CID FTMS 0 0 0 20884 1296019.25 0.0547030340485873 10 -0.627960205078125 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 31.068 0.0 0.0 0.89131 0.0 0.0 0.0 2445.028570982456 2445.028570982456 -0.1861066592519442 0.0 -0.1861066592519442 0.0 0 0.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 0.89131 - 206 1 1.869 58247.0 1.0 14980 5903 20884 HBL1_DMSO_200M_050219_1,20885 HBL1_DMSO_200M_050219_1,20885, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20886 102.58 180.0 574800.0 25 0 69614.0 + 25614 NFPEHIFPAL 10 106 592.8085477936168 1183.6025426540334 2 592.8089477419853 MULTI CID FTMS 0 0 0 20884 293481.53125 0.026898691069485 8 -0.5390853881835938 2 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 47.7319792270244 0.0934623409360514 3 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 8 8 57.005 0.0 0.0 4.8162 0.0 0.0 0.0 126.03530298404532 126.03530298404532 31.096733239557235 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.6382104921644451 0.8494850021680094 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 4.8162 - 1501 + 1 1.869 82238.9 1.0 14981 5903 20884 HBL1_DMSO_200M_050219_1,20886 HBL1_DMSO_200M_050219_1,20886,NFPEHIFPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20887 102.59 800.0 463100.0 25 0 18111.0 -1 0 180 1162.8876223461473 3485.641037638642 3 1163.554736316204 MULTI CID FTMS 0 0 0 20884 297318.90625 0.0774011341812249 11 -0.6317062377929688 3 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 66.705 0.0 0.0 1.9137 0.0 0.0 0.0 2445.023512803304 2445.023512803304 26.421838786244308 0.0 0.0 0.0 0 2.4247425010840047 0.0 0.2614393726401688 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9137 - 1514 1 1.869 217006.9 0.9100000262260436 14982 5903 20884 HBL1_DMSO_200M_050219_1,20887 HBL1_DMSO_200M_050219_1,20887, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20888 102.59 282.0 537940.0 25 0 58162.0 + 34819 SQFLGYPITL 10 149 569.8109912520542 1137.6074295709084 2 569.8105346560478 MULTI CID FTMS 0 0 0 20884 190061.4375 0.3803066819732312 1 -0.1438446044921875 4 Unmodified _SQFLGYPITL_ ENST00000507090.2_1_4:13338641-13339112:+|nuORF;nc|ENSG00000205940|Q58FF8|HSP90AB2P 41.34703777101937 0.1433426498679313 3 [{I|L}V]KE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q 9 9 + 48.624 0.0 0.0 4.2742 4.2742 75.336 0.0 0.0 0.0 2.5160325745414056 14.675272080370457 2.5160325745414056 3.0351879606767582 0 0.7396518287104438 0.5376020021010439 0.4247425010840047 0.0 [{I|L}V]KE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q;[{I|L}T]{I|L}AA{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q;[{I|L}P]TN[HS]TK{I|L}Q;{I|L}{I|L}V[YQ]D{M(Oxidation (M))|F}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q;[K{I|L}]VE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q;{I|L}{I|L}V[SG]{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[K{I|L}]D{M(Oxidation (M))|F}{I|L}Q;[{I|L}V]{I|L}[YQ]D{M(Oxidation (M))|F}{I|L}Q;[{I|L}V]{I|L}[SG]{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}Q 4.2742;4.0074;3.797;3.6858;3.6715;3.6631;3.6455;3.5431;3.505;3.4648 -;-;-;-;-;-;-;-;-;- 3230 1 1.869 117630.4 1.0 14983 5903 20884 HBL1_DMSO_200M_050219_1,20888 HBL1_DMSO_200M_050219_1,20888,SQFLGYPITL False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 20889 102.61 800.0 279530.0 25 0 3254.1 -1 0 185 1129.9601101224962 0 1129.864428699017 PEAK CID FTMS 0 0 0 20884 61628.21484375 1.0 0 0.0 5 3 Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}T{I|L}{M(Oxidation (M))|F} 6 -1 18.621 0.0 0.0 0.82469 0.0 0.0 1214.424784598705 222.08968530826408 1436.514469906969 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}T{I|L}{M(Oxidation (M))|F} 0.82469 - 1730 + 1 1.869 133720.9 0.7300000190734863 14984 5903 20884 HBL1_DMSO_200M_050219_1,20889 HBL1_DMSO_200M_050219_1,20889, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20890 102.62 800.0 270610.0 25 0 6731.7 -1 0 192 1082.3073917572071 0 1082.754809558392 PEAK CID FTMS 0 0 0 -1 0 6 3 SPA 3 -1 7.6638 0.0 0.0 0.35438 0.0 0.0 1753.4031308271112 151.05176721744377 1904.454898044555 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 SPA 0.35438 - 874 + 1 1.869 132867.6 0.7400000095367432 14985 5903 20884 HBL1_DMSO_200M_050219_1,20890 HBL1_DMSO_200M_050219_1,20890, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20891 102.64 800.0 480730.0 25 0 6295.2 -1 0 126 847.1560457046531 3384.5950769522124 4 847.4053222537041 MULTI CID FTMS 0 0 0 20884 166338.796875 0.1075099110810208 8 -0.5390853881835938 7 3 [YQ]GGPQ 6 -1 24.486 0.0 0.0 0.72347 0.0 0.0 0.0 2751.295511257117 2751.295511257117 13.984936828668708 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6861818737241735 [YQ]GGPQ 0.72347 - 5184 1 1.869 244441.2 0.6100000143051147 14986 5903 20884 HBL1_DMSO_200M_050219_1,20891 HBL1_DMSO_200M_050219_1,20891, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20892 102.64 224.0 302500.0 25 0 13053.0 -1 0 122 966.0874339475864 0 966.2516357302666 PEAK CID FTMS 0 0 0 20884 23963.462890625 0.5399801546958447 1 -0.1438446044921875 8 3 A 1 -1 4.6041 0.0 0.0 0.23853 0.0 0.0 1724.053821897323 132.0460604303344 1856.0998823276573 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.23853 - 153 + 1 1.869 50432.7 1.0 14987 5903 20884 HBL1_DMSO_200M_050219_1,20892 HBL1_DMSO_200M_050219_1,20892, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20893 102.65 210.0 293160.0 25 0 3540.1 -1 0 100 935.2774268514688 0 934.9478637576104 PEAK CID FTMS 0 0 0 20884 24912.1171875 0.4850689695221621 -1 0.1274490356445312 9 3 {M(Oxidation (M))|F}P 2 -1 9.464 0.0 0.0 0.50649 0.0 0.0 1138.1367495996185 483.2672518365844 1621.4040014362029 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}P 0.50649 - 29 + 1 1.869 42256.1 1.0 14988 5903 20884 HBL1_DMSO_200M_050219_1,20893 HBL1_DMSO_200M_050219_1,20893, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20894 102.65 184.0 392310.0 25 0 73256.0 + -1 FPLPTPLSV 9 89 970.8132008876072 0 970.9116088747978 PEAK CID FTMS 0 0 0 -1 0 10 chr19:38596483-38597034|48|26.69|0.32|6.37|-|0|None,MAP4K1|1;ENST00000588938.1_1_19:39086232-39087718:-|nuORF;nc|ENSG00000104814|Q92918|MAP4K1;ENSG00000104814|ENST00000396857|MAP4K1 3 {M(Oxidation (M))|F}PA{I|L}MVT 7 -1 36.265 0.0 0.0 1.8697 0.0 0.0 970.0551255210266 207.11408411197505 1177.1692096330016 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4361818737241734 0.0 {M(Oxidation (M))|F}PA{I|L}MVT 1.8697 - 379 + 1 1.869 52453.8 1.0 14989 5903 20884 HBL1_DMSO_200M_050219_1,20894 HBL1_DMSO_200M_050219_1,20894, False False FPLPTPLSV 102.64898 970.911608874798 2009135.5 20884.0 chr19:38596483-38597034|48|26.69|0.32|6.37|-|0|None,MAP4K1|1;;ENST00000588938.1_1_19:39086232-39087718:-|nuORF;;nc|ENSG00000104814|Q92918|MAP4K1;;ENSG00000104814|ENST00000396857|MAP4K1 5.476513544718425 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20895 102.66 800.0 254900.0 25 0 3727.5 -1 0 157 1199.329638659954 0 1199.329638659954 PEAK CID FTMS 0 0 0 -1 0 11 3 EN 2 -1 5.5732 0.0 0.0 0.23254 0.0 0.0 1967.4940736644464 183.0421541803344 2150.536227844781 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EN 0.23254 - 287 + 1 1.869 116892.0 0.6499999761581421 14990 5903 20884 HBL1_DMSO_200M_050219_1,20895 HBL1_DMSO_200M_050219_1,20895, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20896 102.67 160.0 157620.0 25 0 4060.5 -1 0 63 1178.096222085875 0 1178.346606433392 PEAK CID FTMS 0 0 0 -1 0 12 3 R 1 -1 6.9897 0.0 0.0 0.29691 0.0 0.0 1020.5292839160878 1174.4961641901002 2195.025448106188 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.29691 - 3 + 1 1.869 25053.4 1.0 14991 5903 20884 HBL1_DMSO_200M_050219_1,20896 HBL1_DMSO_200M_050219_1,20896, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20897 102.67 158.0 468020.0 25 0 9255.5 -1 RLRCRRRRRPR 11 114 819.4993984220481 0 819.0361816287041 PEAK CID FTMS 0 0 0 20884 12342.5927734375 0.7657400383875299 -1 0.1274490356445312 13 Carbamidomethyl (C) _RLRC(Carbamidomethyl (C))RRRRRPR_ ENST00000315367.3_1_8:96146046-96166295:+|nuORF 0.0 0.4761840153648598 3 T 1 -1 6.7217 0.0 0.0 0.41061 0.0 0.0 1258.8295330728083 274.08371912174067 1532.9132521945492 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T 0.41061 - 96 + 1 1.869 57224.0 1.0 14992 5903 20884 HBL1_DMSO_200M_050219_1,20897 HBL1_DMSO_200M_050219_1,20897,RLRCRRRRRPR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20898 102.68 800.0 66803.0 25 0 1205.1 + 36410 SYTPKRWRERR 11 115 767.9209472537041 0 767.9209472537041 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _SYTPKRWRERR_ REV__ENSG00000152404|ENST00000282251|CWF19L2;REV__nc|ENSG00000152404|Q2TBE0-2|CWF19L2;REV__nc|ENSG00000152404|Q2TBE0-3|CWF19L2 0.3506318815782774 0.47618401536486 3 M 1 -1 2.4743 0.0 0.0 0.16131 0.0 0.0 710.2813343494018 689.4718111627561 1399.753145512158 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.16131 - 6 + 1 1.869 48265.9 0.449999988079071 14993 5903 20884 HBL1_DMSO_200M_050219_1,20898 HBL1_DMSO_200M_050219_1,20898,SYTPKRWRERR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20899 102.69 287.0 436630.0 25 0 37736.0 + 33186 SFFDNISSEL 10 117 579.7692190442372 1157.5238851552742 2 579.7699462771416 MULTI CID FTMS 0 0 0 20884 91684.3203125 0.3809181250154583 -1 0.1274490356445312 15 Unmodified _SFFDNISSEL_ ENSG00000149657|ENST00000279068|LSM14B;nc|ENSG00000149657|Q9BX40-2|LSM14B 99.79894945604345 0.0086314121850342 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}DN{I|L} 6 4 61.872 0.0 0.0 5.3452 0.0 0.0 0.0 431.1774053591793 431.1774053591793 32.36748654366032 0.0 0.0 0.0 0 0.2742275032520141 2.0 1.0 0.8494850021680094 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}DN{I|L} 5.3452 + + 1784 1 1.869 94812.4 1.0 14994 5903 20884 HBL1_DMSO_200M_050219_1,20899 HBL1_DMSO_200M_050219_1,20899,SFFDNISSEL True True SFFDNISSEL 102.6895 579.769946277142 1825938.25 20884.0 nc|ENSG00000149657|Q9BX40-2|LSM14B;;ENSG00000149657|ENST00000279068|LSM14B 6.466561317443848 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20900 102.7 384.0 381510.0 25 0 5149.0 30306 QYWHWLRWCWS 11 152 825.8781970772287 0 825.5583984255791 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _QYWHWLRWCWS_ ENST00000513055.1_1_5:92921088-92921313:-|nuORF 1.1933415558491238 0.4761840153648598 3 {I|L}QGYG 5 10 16.542 0.0 0.0 1.0027 0.0 0.0 906.3804838006886 222.08901392154533 1128.469497722234 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}QGYG 1.0027 - 585 + 1 1.869 99136.2 1.0 14995 5903 20884 HBL1_DMSO_200M_050219_1,20900 HBL1_DMSO_200M_050219_1,20900,QYWHWLRWCWS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20901 102.71 800.0 117800.0 25 0 2791.8 -1 0 149 1188.742358386517 0 1188.742358386517 PEAK CID FTMS 0 0 0 -1 0 17 3 E 1 -1 3.9794 0.0 0.0 0.16752 0.0 0.0 1633.2011341540904 610.2071016900999 2243.40823584419 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16752 - 55 + 1 1.869 58268.4 0.4699999988079071 14996 5903 20884 HBL1_DMSO_200M_050219_1,20901 HBL1_DMSO_200M_050219_1,20901, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20903 102.72 50.0 2912500.0 25 0 330320.0 + 33765 SLAQYLINV 9 118 510.7898562985402 1019.5651596638804 2 510.7899352908134 MULTI CID FTMS 0 0 0 20902 1102304.75 1.0 0 0.0 1 Unmodified _SLAQYLINV_ ENSG00000197111|ENST00000546463|PCBP2;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 67.83816525789305 0.0219346420158844 3 {I|L}S{I|L}MNV 6 5 63.739 0.0 0.0 6.2516 0.0 0.0 344.20411696059574 0.0 344.20411696059574 0.0 39.20121377294754 0.0 0.0 0 0.2887254899964357 0.0 0.8494850021680094 1.2971062485323517 {I|L}S{I|L}MNV 6.2516 - 1513 + 1 1.983 112176.8 1.0 14997 5904 20902 HBL1_DMSO_200M_050219_1,20903 HBL1_DMSO_200M_050219_1,20903,SLAQYLINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20904 102.72 287.0 524820.0 25 0 61197.0 + 11935 GMPDFLEKL 9 105 525.2702477700904 1048.5259426069806 2 525.2703735232353 MULTI CID FTMS 0 0 0 20902 221309.15625 0.0608386719602093 6 -0.32208251953125 2 Unmodified _GMPDFLEKL_ ENSG00000084090|ENST00000337288|STARD7 62.57269311338072 0.0246576765497938 3 {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L} 9 0 + 63.07 0.0 0.0 6.0151 6.0151 90.881 0.0 0.0 0.0 8.17024086827658 12.98332479720628 8.17024086827658 21.933115814076345 0 0.3807196863200844 0.0 1.079689690656103 0.6861818737241735 + + {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L};{[MG]|[TS]}{I|L}[MD]{I|L}EK{I|L};{[MG]|[TS]}{[ET]|[MV]}E{I|L}EK{I|L};{[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}[{I|L}T]GV;[R{M(Oxidation (M))|F}]DE{I|L}EK{I|L};{[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}{I|L}{I|L}[SG];{[MG]|[TS]}P[YR]{I|L}PC{I|L};{[MG]|[TS]}{I|L}[R{M(Oxidation (M))|F}]{I|L}PC{I|L};{[MG]|[TS]}P[YR]{[ET]|[MV]}PV;{[MG]|[TS]}{I|L}[R{M(Oxidation (M))|F}]{[ET]|[MV]}PV 6.0151;3.9233;3.2731;2.8303;2.8141;2.6363;2.0865;1.7994;1.1801;0.92281 +;-;-;-;-;-;-;-;-;- + 607 + 1 1.983 122232.6 1.0 14998 5904 20902 HBL1_DMSO_200M_050219_1,20904 HBL1_DMSO_200M_050219_1,20904,GMPDFLEKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20905 102.73 273.0 1014800.0 25 0 177300.0 31077 RLLDLDIPMSV 11 96 636.3551044868834 1270.6956560405667 2 636.3554565310478 MULTI CID FTMS 0 0 0 20902 323197.375 0.6175993353873965 -2 0.2712936401367187 3 Unmodified _RLLDLDIPMSV_ ENSG00000153560|ENST00000283629|UBP1;nc|ENSG00000153560|Q9NZI7-4|UBP1 94.90867108109512 0.0004917860609384 3 D{I|L}D{I|L}PMSV 8 3 83.965 0.0 0.0 6.6078 0.0 0.0 382.2695484845719 0.0 382.2695484845719 0.0 49.78383197503419 0.0 0.0 0 1.7302046884880935 0.0 1.579689690656103 0.0 + D{I|L}D{I|L}PMSV 6.6078 + + 392 1 1.983 206051.0 1.0 14999 5904 20902 HBL1_DMSO_200M_050219_1,20905 HBL1_DMSO_200M_050219_1,20905,RLLDLDIPMSV True True RILDIDIPMSV 102.72543 636.355456531048 9303072.0 20902.0 nc|ENSG00000135457|Q12800-2|TFCP2;;ENSG00000135457|ENST00000257915|TFCP2;;nc|ENSG00000135457|Q12800-4|TFCP2;;nc|ENSG00000135457|Q12800-3|TFCP2 7.065530459086101 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20906 102.73 452.0 407100.0 25 0 17696.0 -1 0 199 944.8139636866948 0 945.0291015505792 PEAK CID FTMS 0 0 0 -1 0 4 3 T 1 -1 6.9897 0.0 0.0 0.37029 0.0 0.0 1012.1396123418313 771.4076632135374 1783.5472755553683 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.37029 - 422 + 1 1.983 115876.9 1.0 15000 5904 20902 HBL1_DMSO_200M_050219_1,20906 HBL1_DMSO_200M_050219_1,20906, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20907 102.74 302.0 511840.0 25 0 18336.0 + 3249 AYGASFLSF 9 169 962.4620421435264 961.4547656769264 1 962.4637939333916 MULTI CID FTMS 0 0 0 20902 167012.203125 0.8857760544195363 -4 0.4655380249023437 5 Unmodified _AYGASFLSF_ ENSG00000159596|ENST00000372025|TMEM69 64.23631603340823 0.0237365939569086 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGT{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F} 9 2 + 69.734 0.0 0.0 7.2529 7.2529 88.181 0.0 0.0 0.0 16.478174818886373 16.478174818886373 16.478174818886373 6.082268588648248 0 0.6421590589602533 1.3010299956639813 1.25 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGT{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NT{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F};[YQ]GT{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F};[YG]AGT{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}QAYS{M(Oxidation (M))|F};{[QG]|[NA]}YT{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F};[YG]QT{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}Q{M(Oxidation (M))|F}SS{M(Oxidation (M))|F};[QP]SH{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F};[PA]GSH{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F} 7.2529;6.6203;5.5391;5.4204;5.1357;4.8949;4.7878;4.7206;4.7126;4.6062 -;-;-;-;-;-;-;-;-;- 3473 1 1.983 100512.8 1.0 15001 5904 20902 HBL1_DMSO_200M_050219_1,20907 HBL1_DMSO_200M_050219_1,20907,AYGASFLSF True True AYGASFLSF 102.73904 962.463793933392 2402816.25 20902.0 ENSG00000159596|ENST00000372025|TMEM69 6.020001252492269 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20908 102.75 428.0 932140.0 25 0 252320.0 + 29348 QIYDIFQKL 9 130 584.3243810143382 1166.6342090954763 2 584.3239013552666 MULTI CID FTMS 0 0 0 20902 181651.859375 1.0 0 0.0 6 Unmodified _QIYDIFQKL_ ENSG00000161960|ENST00000293831|EIF4A1;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1 110.6747026088012 0.0053351249510064 3 [Q{I|L}]YD{I|L}{M(Oxidation (M))|F}QK{I|L} 9 0 [Q{I|L}] + + 48.578 23.015 9.5443 4.164 4.164 53.009 0.0 0.0 0.0 0.0 21.623128764381818 0.0 0.0 0 1.3243923658886183 0.0 0.0 1.5763487002666077 + + [Q{I|L}]YD{I|L}{M(Oxidation (M))|F}QK{I|L} 4.164 + + 1685 + 1 1.983 290873.9 1.0 15002 5904 20902 HBL1_DMSO_200M_050219_1,20908 HBL1_DMSO_200M_050219_1,20908,QIYDIFQKL True True QIYDIFQKL 102.74668 584.323901355267 1279395.125 20902.0 ENST00000577731.1_1_17:7478540-7480862:+|nuORF;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF 6.447129249572754 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20909 102.76 665.0 168310.0 25 0 11021.0 -1 0 111 1052.777758777142 0 1052.777758777142 PEAK CID FTMS 0 0 0 -1 0 7 3 TVAY 4 -1 23.175 0.0 0.0 1.1017 0.0 0.0 1393.175826281706 273.1246431940063 1666.300469475712 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 TVAY 1.1017 - 1929 + 1 1.983 74021.8 1.0 15003 5904 20902 HBL1_DMSO_200M_050219_1,20909 HBL1_DMSO_200M_050219_1,20909, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20910 102.77 435.0 496230.0 25 0 6307.5 -1 0 108 832.167925440677 0 831.8909179568291 PEAK CID FTMS 0 0 0 -1 0 8 3 Q 1 -1 6.9897 0.0 0.0 0.42048 0.0 0.0 1032.0422441667754 499.1961153619751 1531.2383595287504 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.42048 - 108 + 1 1.983 138947.8 1.0 15004 5904 20902 HBL1_DMSO_200M_050219_1,20910 HBL1_DMSO_200M_050219_1,20910, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20911 102.77 380.0 647270.0 25 0 31766.0 + -1 RCDEWWRECDE 11 227 820.8121415608281 0 820.7281371951103 PEAK CID FTMS 0 0 0 20902 41687.88671875 0.515491556150817 -2 0.2712936401367187 9 2 Carbamidomethyl (C) _RC(Carbamidomethyl (C))DEWWREC(Carbamidomethyl (C))DE_ REV__ENSG00000110203|ENST00000611028|FOLR3 0.2690200627634905 0.4761840153648598 3 VH{I|L}{M(Oxidation (M))|F}T 5 -1 17.246 0.0 0.0 1.0518 0.0 0.0 928.2574485495874 111.02070795230702 1039.2781565018945 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 VH{I|L}{M(Oxidation (M))|F}T 1.0518 - 957 + 1 1.983 156079.7 1.0 15005 5904 20902 HBL1_DMSO_200M_050219_1,20911 HBL1_DMSO_200M_050219_1,20911,RCDEWWRECDE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20912 102.79 800.0 267210.0 25 0 16127.0 + -1 TLDQTLLEL 9 110 1045.5807251289823 0 1045.579150378704 PEAK CID FTMS 0 0 0 20902 105271.3984375 0.6817322375082733 -2 0.2712936401367187 10 ENST00000378300.9_1_9:35682080-35682179:-|nuORF;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2 3 {I|L}E{I|L}{I|L}TQD 7 -1 56.49 0.0 0.0 2.704 0.0 0.0 1062.5718216738596 211.10955225162343 1273.681373925483 0.0 0.0 0.0 0.0 0 0.0 0.0 2.274227503252014 0.3807196863200844 {I|L}E{I|L}{I|L}TQD 2.704 - 4232 + 1 1.983 132053.4 0.5899999737739563 15006 5904 20902 HBL1_DMSO_200M_050219_1,20912 HBL1_DMSO_200M_050219_1,20912, False False TLDQTLLEL 102.78676 1045.5791503787 1982118.25 20902.0 ENST00000378300.9_1_9:35682080-35682179:-|nuORF;;nc|ENSG00000198467|P07951-2|TPM2;;nc|ENSG00000198467|P07951-3|TPM2 5.562919457753499 1.0 False 9.0 True non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 20913 102.79 321.0 396360.0 25 0 57691.0 + 15218 LPWKPVFI 8 126 500.3053455564421 998.5961381796842 2 500.3055602908134 MULTI CID FTMS 0 0 0 20902 95306.078125 0.7504563328018268 -2 0.2712936401367187 11 Unmodified _IPFLHFII_ ENSG00000154305|ENST00000344922|MIA3;nc|ENSG00000154305|Q5JRA6-2|MIA3;ENST00000470521.1_1_1:222791452-222819114:+|nuORF;nc|ENSG00000154305|Q5JRA6-4|MIA3;ENST00000495210.1_1_1:222817751-222823660:+|nuORF 41.81723621529253 0.2038889569391319 3 {I|L}PSVK[VP]{M(Oxidation (M))|F}{I|L} 9 6 + 63.401 0.0 0.0 6.349 6.349 77.537 0.0 0.0 0.0 37.58191826486773 14.973024840566469 14.973024840566469 0.4575749056067479 0 0.8609243748081783 1.6989700043360187 0.0 0.0 {I|L}PSVK[VP]{M(Oxidation (M))|F}{I|L};{I|L}PWK[VP]{M(Oxidation (M))|F}{I|L};{I|L}PSVK{[ET]|[MV]}{I|L}{I|L};{I|L}PWK{[ET]|[MV]}{I|L}{I|L};{I|L}PWK{[QS]|[NT]}K{I|L};{I|L}PWK[KQ]S{I|L};{I|L}P{[DA]|[EG]}K{[ET]|[MV]}{I|L}{I|L};{I|L}PWK[KQ]TV;{I|L}P[{I|L}V][WM]K{I|L};[PS]{I|L}VK[VP]{M(Oxidation (M))|F}{I|L} 6.349;6.3032;5.8968;5.851;5.2493;5.0272;4.9235;4.1228;3.0128;2.4442 -;-;-;-;-;-;-;-;-;- 1208 + 1 1.983 97971.9 1.0 15007 5904 20902 HBL1_DMSO_200M_050219_1,20913 HBL1_DMSO_200M_050219_1,20913,IPFLHFII False True LPWKPVFI 102.79406 500.305560290813 1134402.625 20902.0 ENSG00000154305|ENST00000344922|MIA3;;nc|ENSG00000154305|Q5JRA6-2|MIA3;;ENST00000470521.1_1_1:222791452-222819114:+|nuORF;;nc|ENSG00000154305|Q5JRA6-4|MIA3;;ENST00000495210.1_1_1:222817751-222823660:+|nuORF 5.5533796946207685 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20915 102.81 800.0 226360.0 25 0 34025.0 + -1 DIGFLLQMC 9 134 528.2482061270906 1054.4818593209811 2 528.2487670779228 MULTI CID FTMS 0 0 0 20914 38722.953125 0.4525504099309241 1 -0.0358734130859375 1 Oxidation (M) _DIGFLLQM(Oxidation (M))C_ REV__ENSG00000185247|ENST00000355220|MAGEA11;REV__ENST00000518694.1_1_X:148796119-148798433:+|nuORF;REV__nc|ENSG00000185247|P43364-2|MAGEA11 26.88365393820708 0.1891292719743517 3 {[VA]|[{I|L}G]}D{M(Oxidation (M))|F}{I|L} 5 -1 50.234 0.0 0.0 4.7638 0.0 0.0 0.0 506.1719293174481 506.1719293174481 31.997734655454337 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.6421590589602533 0.0 {[VA]|[{I|L}G]}D{M(Oxidation (M))|F}{I|L} 4.7638 - 820 1 2.048 146698.6 0.3300000131130218 15008 5905 20914 HBL1_DMSO_200M_050219_1,20915 HBL1_DMSO_200M_050219_1,20915,DIGFLLQMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20916 102.82 470.0 1426100.0 25 0 189650.0 + 21081 LPAGILPMV 9 185 910.5431191867816 909.5358427201814 1 910.5422241091728 MULTI CID FTMS 0 0 0 20914 142908.34375 0.0726687343926594 -5 0.549346923828125 2 Unmodified _LPAGILPMV_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 109.1542453654746 0.0061419920015381 3 [{I|L}P]AG{I|L}{I|L}PMV 9 0 + 66.937 0.0 0.0 7.3594 7.3594 81.305 0.0 0.0 0.0 3.8585340729746633 16.478174818886366 3.8585340729746633 0.9144493187081508 0 1.7585820071949732 1.2218487496163564 0.0 0.0 + + [{I|L}P]AG{I|L}{I|L}PMV;[{I|L}P]Q{I|L}{I|L}PMV;[PG]A{I|L}{I|L}{I|L}PMV;[PA]G{I|L}{I|L}{I|L}PMV;[{I|L}P]A{I|L}G{I|L}PMV;[QP]{I|L}{I|L}{I|L}PMV;[PA]{I|L}G{I|L}{I|L}PMV;[AG]P{I|L}{I|L}{I|L}PMV;[{I|L}P]AG{I|L}P{I|L}MV;[{I|L}P]Q{I|L}P{I|L}MV 7.3594;7.2589;6.9352;6.8232;6.5454;6.314;6.2115;5.9771;5.8805;5.78 +;-;-;-;-;-;-;-;-;- + 1823 1 2.048 426258.3 1.0 15009 5905 20914 HBL1_DMSO_200M_050219_1,20916 HBL1_DMSO_200M_050219_1,20916,LPAGILPMV True True LPAGILPMV 102.81974 910.542224109173 19240710.0 20914.0 nc|ENSG00000124214|O95793-2|STAU1;;nc|ENSG00000124214|O95793-3|STAU1;;ENSG00000124214|ENST00000371856|STAU1 6.669383843739827 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20917 102.83 591.0 131750.0 25 0 4291.7 -1 0 127 1152.503222644329 0 1152.503222644329 PEAK CID FTMS 0 0 0 -1 0 3 3 NG 2 -1 7.9588 0.0 0.0 0.34559 0.0 0.0 1906.814812132605 222.0889376276 2128.9037497602053 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NG 0.34559 - 158 + 1 2.048 50858.1 1.0 15010 5905 20914 HBL1_DMSO_200M_050219_1,20917 HBL1_DMSO_200M_050219_1,20917, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20919 102.83 137.0 1585700.0 25 0 54965.0 -1 0 130 872.4175932028735 3485.641266945094 4 872.9178344607353 MULTI CID FTMS 0 0 0 20918 803662.375 0.0339213867874212 13 -0.4932632446289062 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 40.583 0.0 0.0 1.1643 0.0 0.0 0.0 2445.032721373081 2445.032721373081 -0.5752873195556418 0.0 -0.5752873195556418 0.0 0 0.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.1643 - 584 1 2.048 140916.9 1.0 15011 5906 20918 HBL1_DMSO_200M_050219_1,20919 HBL1_DMSO_200M_050219_1,20919, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20920 102.84 321.0 360530.0 25 0 36874.0 + 33483 SIIEQLDPVSF 11 117 624.3295194466696 1246.644485960139 2 624.3287841677666 MULTI CID FTMS 0 0 0 20918 104337.015625 0.7387161240897513 -3 0.2635269165039062 2 Unmodified _SIIEQLDPVSF_ ENSG00000162959|ENST00000404530|MEMO1;ENST00000441868.2_1_6:135219409-135219799:+|nuORF;nc|ENSG00000162959|Q9Y316-2|MEMO1;nc|ENSG00000162959|Q9Y316-3|MEMO1 110.79276546118962 0.0144472785759772 3 {[TV]|[{I|L}S]}{I|L}EQ{I|L}DPV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 11 0 + 83.035 0.0 0.0 6.6606 6.6606 84.964 0.0 0.0 0.0 4.577173621502197 5.862435673934286 4.577173621502197 4.577173621502197 0 1.1549471895720984 1.6989700043360187 1.8076556684809653 0.0 + + {[TV]|[{I|L}S]}{I|L}EQ{I|L}DPV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[VP]SS{I|L}S{I|L}DPV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[TV]|[{I|L}S]}E{I|L}Q{I|L}DPV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[TV]|[{I|L}S]}{I|L}E[AG]{I|L}DPV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[VP]S{I|L}SS{I|L}DPV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}Q{I|L}S{I|L}DPV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}Q{I|L}DPV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[TV]|[{I|L}S]}E{I|L}[AG]{I|L}DPV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}S{I|L}Q{I|L}DPV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[VS]PS{I|L}S{I|L}DPV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 6.6606;6.2935;6.2105;5.9284;5.5655;5.5312;5.5085;5.4782;5.3769;5.0719 +;-;-;-;-;-;-;-;-;- + 8359 1 2.048 90844.7 1.0 15012 5906 20918 HBL1_DMSO_200M_050219_1,20920 HBL1_DMSO_200M_050219_1,20920,SIIEQLDPVSF True True SIIEQLDPVSF 102.84076 624.328784167767 1428296.125 20918.0 ENSG00000162959|ENST00000404530|MEMO1;;nc|ENSG00000162959|Q9Y316-2|MEMO1;;nc|ENSG00000162959|Q9Y316-3|MEMO1;;ENST00000441868.2_1_6:135219409-135219799:+|nuORF 7.577331225077311 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20921 102.84 171.0 814950.0 25 0 32680.0 -1 0 174 932.6217017701556 0 932.534716784954 PEAK CID FTMS 0 0 0 20918 76145.5 1.0 0 0.0 3 3 ES{I|L}EP 5 -1 24.609 0.0 0.0 1.3208 0.0 0.0 1179.8799869369925 125.07273279361564 1304.952719730608 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1421590589602533 0.0 ES{I|L}EP 1.3208 - 230 + 1 2.048 87344.8 1.0 15013 5906 20918 HBL1_DMSO_200M_050219_1,20921 HBL1_DMSO_200M_050219_1,20921, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20922 102.85 125.0 810360.0 25 0 11382.0 -1 0 99 917.180015369666 0 917.2664062380792 PEAK CID FTMS 0 0 0 20918 26993.71484375 0.4583148431554286 -1 0.0358734130859375 4 3 {I|L}{I|L} 2 -1 9.464 0.0 0.0 0.51649 0.0 0.0 1046.928254761013 556.2282198541624 1603.1564746151753 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 0.51649 - 29 + 1 2.048 66586.2 1.0 15014 5906 20918 HBL1_DMSO_200M_050219_1,20922 HBL1_DMSO_200M_050219_1,20922, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20923 102.85 215.0 174040.0 25 0 9905.6 -1 0 90 1151.420214831829 0 1151.420214831829 PEAK CID FTMS 0 0 0 -1 0 5 3 MNA 3 -1 10.177 0.0 0.0 0.44233 0.0 0.0 1773.6087879626832 208.0733126276 1981.6821005902832 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MNA 0.44233 - 23 + 1 2.048 29490.3 1.0 15015 5906 20918 HBL1_DMSO_200M_050219_1,20923 HBL1_DMSO_200M_050219_1,20923, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20924 102.86 800.0 110460.0 25 0 1452.0 -1 0 118 1193.140429675579 0 1193.140429675579 PEAK CID FTMS 0 0 0 -1 0 6 3 H 1 -1 4.6041 0.0 0.0 0.1931 0.0 0.0 1441.717613646277 802.4456270807249 2244.1632407270017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.1931 - 30 + 1 2.048 53651.8 0.8100000023841858 15016 5906 20918 HBL1_DMSO_200M_050219_1,20924 HBL1_DMSO_200M_050219_1,20924, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20925 102.87 529.0 364010.0 25 0 20192.0 + 14354 IEVCFHRRRFF 11 151 755.397381515911 0 755.3939697146416 PEAK CID FTMS 0 0 0 20918 183619.53125 0.7742070943119975 -3 0.2635269165039062 7 Unmodified _IEVCFHRRRFF_ REV__ENST00000462039.5_1_6:74192220-74192271:+|nuORF 6.2057823575117 0.47618401536486 3 VT{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4 -1 23.404 0.0 0.0 1.5512 0.0 0.0 772.4005122262998 239.1047304742797 1011.5052427005796 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 VT{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.5512 - 492 + 1 2.048 143014.0 1.0 15017 5906 20918 HBL1_DMSO_200M_050219_1,20925 HBL1_DMSO_200M_050219_1,20925,IEVCFHRRRFF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20926 102.89 726.0 416720.0 25 0 3970.7 -1 0 106 952.5727335622864 0 952.3072997927666 PEAK CID FTMS 0 0 0 -1 0 8 3 RQGY 4 -1 6.3752 0.0 0.0 0.33498 0.0 0.0 1116.7482107247902 279.11179529361567 1395.8600060184058 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 RQGY 0.33498 - 403 + 1 2.048 184899.6 1.0 15018 5906 20918 HBL1_DMSO_200M_050219_1,20926 HBL1_DMSO_200M_050219_1,20926, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20927 102.89 219.0 521070.0 25 0 36082.0 + 43430 WRRRRHLKRLQ 11 177 802.9947387576103 0 802.9947387576103 PEAK CID FTMS 0 0 0 -1 0 9 Unmodified _WRRRRHLKRLQ_ REV__ENST00000297293.5_1_7:97832983-97833265:+|nuORF 0.0 0.4761840153648598 3 NM 2 -1 9.464 0.0 0.0 0.59003 0.0 0.0 462.48561901737054 893.3778170221311 1355.8634360395015 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NM 0.59003 - 80 + 1 2.048 77986.9 1.0 15019 5906 20918 HBL1_DMSO_200M_050219_1,20927 HBL1_DMSO_200M_050219_1,20927,WRRRRHLKRLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20928 102.9 514.0 645400.0 25 0 32059.0 -1 0 254 826.7555103843786 0 827.1044189333916 PEAK CID FTMS 0 0 0 20918 52357.0546875 0.7118939033495869 -3 0.2635269165039062 10 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.42323 0.0 0.0 1369.362142739657 132.0461825006469 1501.4083252403038 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.42323 - 970 + 1 2.048 208129.5 1.0 15020 5906 20918 HBL1_DMSO_200M_050219_1,20928 HBL1_DMSO_200M_050219_1,20928, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20930 102.92 800.0 17272.0 25 0 906.87 -1 DDEEMEFGEHC 11 42 678.7215453982353 0 678.7215453982353 PEAK CID FTMS 0 0 0 -1 0 1 Oxidation (M) _DDEEM(Oxidation (M))EFGEHC_ ENSG00000198796|ENST00000361673|ALPK2;ENST00000590662.1_1_18:56246030-56247365:-|nuORF 0.0 0.4761840153648598 3 {I|L}V 2 -1 9.464 0.0 0.0 0.69823 0.0 0.0 943.1601795642456 197.0941408746704 1140.254320438916 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 0.69823 - 4 + 1 2.06 24162.5 0.800000011920929 15021 5907 20929 HBL1_DMSO_200M_050219_1,20930 HBL1_DMSO_200M_050219_1,20930,DDEEMEFGEHC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20931 102.92 103.0 851720.0 25 0 56462.0 + 33767 SLAQYLINV 9 97 1020.5722757841962 1019.5649993175962 1 1020.576159656048 MULTI CID FTMS 0 0 0 20929 444049.5625 0.2992371483692595 3 -0.132781982421875 2 Unmodified _SLAQYLINV_ ENSG00000197111|ENST00000546463|PCBP2;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 85.76441949171179 0.0161200949243637 3 {[TV]|[{I|L}S]}AQY{I|L}{I|L}NV 9 0 + 103.63 0.0 0.0 10.164 10.164 95.045 0.0 0.0 0.0 20.31718309096373 13.212112250009652 13.212112250009652 9.208187539523747 0 1.5576556684809653 1.5228787452803376 1.774227503252014 0.8252574989159953 + + {[TV]|[{I|L}S]}AQY{I|L}{I|L}NV;{[TV]|[{I|L}S]}AQY{I|L}{I|L}GGV;{[TV]|[{I|L}S]}A[AG]Y{I|L}{I|L}NV;[Y{I|L}]QAS{I|L}{I|L}NV;[YQ]{I|L}AS{I|L}{I|L}NV;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L}{I|L}NV;[QA]{I|L}SY{I|L}{I|L}NV;[YQ]A{I|L}S{I|L}{I|L}NV;{[TV]|[{I|L}S]}A[AG]Y{I|L}{I|L}GGV;[Y{I|L}]QAS{I|L}{I|L}GGV 10.164;9.2613;8.9423;8.1717;8.0159;7.9329;7.702;7.6101;7.553;7.2685 +;-;-;-;-;-;-;-;-;- + 2460 1 2.06 64688.2 1.0 15022 5907 20929 HBL1_DMSO_200M_050219_1,20931 HBL1_DMSO_200M_050219_1,20931,SLAQYLINV True True SLAQYLINV 102.91915 1020.57615965605 44724237.0 20929.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;;nc|ENSG00000197111|Q15366-7|PCBP2 9.018380959828695 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20932 102.92 106.0 558530.0 25 0 8344.6 -1 0 99 875.3405029177666 0 875.3405029177666 PEAK CID FTMS 0 0 0 -1 0 3 3 G 1 -1 6.3759 0.0 0.0 0.36462 0.0 0.0 697.0844959704956 991.5404757135374 1688.624971684033 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 G 0.36462 - 28 + 1 2.06 43693.1 1.0 15023 5907 20929 HBL1_DMSO_200M_050219_1,20932 HBL1_DMSO_200M_050219_1,20932, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20933 102.93 747.0 286770.0 25 0 10202.0 -1 0 147 1158.8740651466278 3473.600366040084 3 1159.206103503704 MULTI CID FTMS 0 0 0 20929 264837.1875 1.0 0 0.0 4 3 [YQ]{M(Oxidation (M))|F}{[QG]|[NA]}TS[HV]N{I|L}DVQN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 30 -1 [YQ]{M(Oxidation (M))|F}{[QG]|[NA]}TS[HV]N{I|L}DVQ + + 87.043 42.105 2.6043 2.5059 2.5059 49.379 0.0 0.0 0.0 0.0 44.93816366525751 0.0 0.0 0 1.2302046884880935 0.0 0.3252574989159953 1.1237125054200234 [YQ]{M(Oxidation (M))|F}{[QG]|[NA]}TS[HV]N{I|L}DVQN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 2.5059 - 37902 + 1 2.06 128627.2 1.0 15024 5907 20929 HBL1_DMSO_200M_050219_1,20933 HBL1_DMSO_200M_050219_1,20933, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20934 102.94 187.0 1559800.0 25 0 69087.0 -1 0 226 870.0754346950313 0 870.1517211794853 PEAK CID FTMS 0 0 0 -1 0 5 3 QGYY 4 -1 17.167 0.0 0.0 0.98767 0.0 0.0 1107.8586197789311 116.0511950128539 1223.909814791785 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QGYY 0.98767 - 2397 + 1 2.06 177601.8 1.0 15025 5907 20929 HBL1_DMSO_200M_050219_1,20934 HBL1_DMSO_200M_050219_1,20934, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20935 102.94 90.0 757760.0 25 0 43045.0 -1 0 147 822.7336531339919 0 822.7974731326103 PEAK CID FTMS 0 0 0 -1 0 6 3 V 1 -1 5.4846 0.0 0.0 0.33372 0.0 0.0 614.9898149576337 926.396127569006 1541.3859425266398 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.33372 - 75 + 1 2.06 46756.1 1.0 15026 5907 20929 HBL1_DMSO_200M_050219_1,20935 HBL1_DMSO_200M_050219_1,20935, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20936 102.95 432.0 611140.0 25 0 51913.0 + 1276 AIPVFLEKL 9 134 515.3208434971758 1028.6271340611515 2 515.3210937380791 MULTI CID FTMS 0 0 0 20929 171158.703125 0.4650795005370797 -3 0.189300537109375 7 Unmodified _AIPVFLEKL_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 42.312485326615175 0.0627620958981271 3 [{I|L}A]PV{M(Oxidation (M))|F}{I|L}EK{I|L} 9 0 + 78.839 0.0 0.0 7.6645 7.6645 80.682 0.0 0.0 0.0 27.14764271519251 7.533276666586119 7.533276666586119 0.1722032235195314 0 0.3494850021680094 2.0 1.0114393726401687 0.4417509724019616 + + [{I|L}A]PV{M(Oxidation (M))|F}{I|L}EK{I|L};[{I|L}A]PV{I|L}{M(Oxidation (M))|F}EK{I|L};[{I|L}A]PV{M(Oxidation (M))|F}{I|L}E{I|L}K;[{I|L}A]PV{I|L}{M(Oxidation (M))|F}E{I|L}K;[{I|L}A]{I|L}[VP]{M(Oxidation (M))|F}EK{I|L};[{I|L}A]{I|L}[VP]{M(Oxidation (M))|F}E{I|L}K;[{I|L}A]{I|L}T{I|L}KENK;[VP]{M(Oxidation (M))|F}{I|L}EK{I|L}A{I|L};{I|L}{I|L}[PG]{M(Oxidation (M))|F}{I|L}EK{I|L};{I|L}{I|L}[PG]{I|L}{M(Oxidation (M))|F}EK{I|L} 7.6645;7.6477;6.9321;6.9154;6.2099;5.4776;5.0101;4.6491;4.6028;4.5861 +;-;-;-;-;-;-;-;-;- + 1859 + 1 2.06 208310.9 1.0 15027 5907 20929 HBL1_DMSO_200M_050219_1,20936 HBL1_DMSO_200M_050219_1,20936,AIPVFLEKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20938 102.96 800.0 329060.0 25 0 45607.0 + 21333 LPFEPVPVI 9 113 505.7997507110066 1009.5849484888132 2 505.7997924685478 MULTI CID FTMS 0 0 0 20937 131715.9375 0.4255587458278703 -14 1.480438232421875 1 Unmodified _LPFEPVPVI_ ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1 60.38955033654506 0.025866396858536 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}PVPV{I|L} 9 2 + 73.845 0.0 0.0 7.3144 7.3144 83.292 0.0 0.0 0.0 14.687404961837473 16.478174818886373 14.687404961837473 2.218487496163561 0 1.1861818737241734 1.2218487496163564 0.5941876774005249 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}PVPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EP{I|L}VPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EPV{I|L}PV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EPVPV{I|L};{[QN]|[E{I|L}]|[KN]}M{I|L}PVPV{I|L};[{I|L}P]{M(Oxidation (M))|F}EPVPV{I|L};{[QN]|[E{I|L}]|[KN]}MP{I|L}VPV{I|L};[{M(Oxidation (M))|F}E]P{I|L}PVPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EPVP{I|L}V{I|L};{[QN]|[E{I|L}]|[KN]}MPV{I|L}PV{I|L} 7.3144;7.0946;6.7964;6.4198;5.8596;5.6905;5.6398;5.4201;5.3499;5.3416 -;-;-;-;-;+;-;-;-;- + 1667 1 2.06 199771.6 0.550000011920929 15028 5908 20937 HBL1_DMSO_200M_050219_1,20938 HBL1_DMSO_200M_050219_1,20938,LPFEPVPVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20939 102.97 86.0 957140.0 25 0 546930.0 + 19558 LFRGYGKR 8 46 996.57534369813 995.56806723153 1 996.5798217654228 MULTI CID FTMS 0 0 0 20937 282475.0625 0.7416289447230904 2 -0.0848236083984375 2 Unmodified _LFRGYGKR_ REV__ENSG00000083168|ENST00000265713|KAT6A 2.302733041254933 0.8103549651115762 3 A 1 -1 5.4846 0.0 0.0 0.5509 0.0 0.0 125.10128363953623 796.4226168268186 921.5239004663548 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.5509 - 3 + 1 2.06 65672.5 1.0 15029 5908 20937 HBL1_DMSO_200M_050219_1,20939 HBL1_DMSO_200M_050219_1,20939,LFRGYGKR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20940 102.97 230.0 446330.0 25 0 21664.0 -1 0 172 825.6353027224541 0 825.6353027224541 PEAK CID FTMS 0 0 0 -1 0 3 3 QPGY 4 -1 11.402 0.0 0.0 0.69135 0.0 0.0 1018.9762806384643 182.05779443912343 1201.034075077588 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QPGY 0.69135 - 237 + 1 2.06 68584.8 1.0 15030 5908 20937 HBL1_DMSO_200M_050219_1,20940 HBL1_DMSO_200M_050219_1,20940, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20942 102.98 241.0 536560.0 25 0 75002.0 + 33766 SLAQYLINV 9 117 510.7898562985402 1019.5651596638804 2 510.7900268435478 MULTI CID FTMS 0 0 0 20941 205790.65625 0.1866912541654202 5 -0.2285308837890625 1 Unmodified _SLAQYLINV_ ENSG00000197111|ENST00000546463|PCBP2;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 51.41523569358685 0.0372669606867193 3 {I|L}S{I|L}MNV 6 5 57.802 0.0 0.0 5.6692 0.0 0.0 344.2057584001452 0.0 344.2057584001452 0.0 40.10310848571114 0.0 0.0 0 0.2614393726401688 0.0 0.805462187404089 1.0501648626366045 {I|L}S{I|L}MNV 5.6692 - 1281 + 1 2.06 103507.7 1.0 15031 5909 20941 HBL1_DMSO_200M_050219_1,20942 HBL1_DMSO_200M_050219_1,20942,SLAQYLINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20943 102.99 800.0 23484.0 25 0 2151.1 + -1 CHCCHCCPCCC 11 54 693.1653930544853 0 693.1653930544853 PEAK CID FTMS 0 0 0 -1 0 2 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))HC(Carbamidomethyl (C))C(Carbamidomethyl (C))HCCPCCC_ REV__ENSG00000197191|ENST00000650725|CYSRT1 0.0 0.4761840153648598 3 W 1 -1 0.088644 0.0 0.0 0.0064034 0.0 0.0 692.4776234119018 502.74250208072505 1195.220125492627 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.0064034 - 1 + 1 2.06 23648.7 0.550000011920929 15032 5909 20941 HBL1_DMSO_200M_050219_1,20943 HBL1_DMSO_200M_050219_1,20943,CHCCHCCPCCC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20944 103.0 800.0 284210.0 25 0 8374.9 -1 RFCEMCCDCRM 11 165 812.7834495141811 0 812.5312988162041 PEAK CID FTMS 0 0 0 20941 100838.9375 1.0 0 0.0 3 4 Carbamidomethyl (C) _RFC(Carbamidomethyl (C))EMC(Carbamidomethyl (C))C(Carbamidomethyl (C))DC(Carbamidomethyl (C))RM_ ENSG00000154845|ENST00000400556|PPP4R1;ENST00000285124.12_1_18:9562972-9595043:-|nuORF;nc|ENSG00000154845|Q8TF05-2|PPP4R1 0.0 0.4761840153648598 3 G{I|L}{I|L}{I|L}T 5 -1 25.305 0.0 0.0 1.5586 0.0 0.0 901.0811135110112 222.12542139224848 1123.2065349032598 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 G{I|L}{I|L}{I|L}T 1.5586 - 302 + 1 2.06 154235.2 0.8899999856948853 15033 5909 20941 HBL1_DMSO_200M_050219_1,20944 HBL1_DMSO_200M_050219_1,20944,RFCEMCCDCRM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20945 103.01 220.0 449990.0 25 0 7184.7 -1 0 87 796.6891278708431 0 796.4099609255791 PEAK CID FTMS 0 0 0 20941 68178.8984375 1.0 0 0.0 4 3 G 1 -1 4.6041 0.0 0.0 0.28932 0.0 0.0 560.8423371004684 970.5022677057248 1531.3446048061933 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.28932 - 28 + 1 2.06 68697.6 1.0 15034 5909 20941 HBL1_DMSO_200M_050219_1,20945 HBL1_DMSO_200M_050219_1,20945, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20946 103.01 230.0 1223400.0 25 0 14290.0 -1 0 183 831.718731075066 2492.134363825398 3 831.7166625857353 MULTI CID FTMS 0 0 0 20941 171359.546875 0.6764361748846353 -1 0.0220718383789062 5 3 [{I|L}T]C(Carbamidomethyl (C))AGQPAG 9 -1 34.685 0.0 0.0 1.3918 0.0 0.0 0.0 1633.714416886198 1633.714416886198 17.38648160700354 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T]C(Carbamidomethyl (C))AGQPAG 1.3918 - 10404 1 2.06 180751.5 1.0 15035 5909 20941 HBL1_DMSO_200M_050219_1,20946 HBL1_DMSO_200M_050219_1,20946, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20947 103.02 379.0 52105.0 25 0 1518.2 -1 0 61 1142.416554107609 0 1142.533007800579 PEAK CID FTMS 0 0 0 -1 0 6 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.06 22390.9 1.0 15036 5909 20941 HBL1_DMSO_200M_050219_1,20947 HBL1_DMSO_200M_050219_1,20947, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20948 103.03 473.0 197320.0 25 0 13618.0 9018 FDGKRWRLWRR 11 166 788.4420457979468 0 788.4088012576103 PEAK CID FTMS 0 0 0 -1 0 7 Unmodified _FDGKRWRLWRR_ ENST00000411552.5_1_7:30498788-30515497:-|nuORF;ENST00000419799.5_1_7:30498788-30503297:-|nuORF 1.3295316138638542 0.4761840153648598 3 {I|L}VY{M(Oxidation (M))|F} 4 10 12.907 0.0 0.0 0.81958 0.0 0.0 917.515853215231 132.04607568912346 1049.5619289043543 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VY{M(Oxidation (M))|F} 0.81958 - 350 + 1 2.06 65666.6 1.0 15037 5909 20941 HBL1_DMSO_200M_050219_1,20948 HBL1_DMSO_200M_050219_1,20948,FDGKRWRLWRR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20949 103.03 190.0 195490.0 25 0 14518.0 -1 WWNGEHTCWCF 11 94 791.8039203201605 0 791.7822753787041 PEAK CID FTMS 0 0 0 -1 0 8 2 Carbamidomethyl (C) _WWNGEHTC(Carbamidomethyl (C))WC(Carbamidomethyl (C))F_ ENST00000559729.5_1_15:85212968-85213184:-|nuORF 0.0 0.4761840153648598 3 A 1 -1 3.9794 0.0 0.0 0.25161 0.0 0.0 1375.487343958877 132.0460604303344 1507.5334043892117 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.25161 - 8 + 1 2.06 30449.8 1.0 15038 5909 20941 HBL1_DMSO_200M_050219_1,20949 HBL1_DMSO_200M_050219_1,20949,WWNGEHTCWCF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 20951 103.04 188.0 666660.0 25 0 116200.0 + 31078 RLLDLDIPMSV 11 55 636.3551044868834 1270.6956560405667 2 636.3551513552666 MULTI CID FTMS 0 0 0 20950 291972.4375 0.5579314601532211 4 -0.1657791137695312 1 Unmodified _RLLDLDIPMSV_ ENSG00000153560|ENST00000283629|UBP1;nc|ENSG00000153560|Q9NZI7-4|UBP1 59.05245873256422 0.0729907235015292 3 D{I|L}D{I|L}PMSV 8 3 55.795 0.0 0.0 4.3909 0.0 0.0 382.26973159004064 0.0 382.26973159004064 0.0 28.87131607423747 0.0 0.0 0 1.6549471895720984 0.0 0.5 0.0 + D{I|L}D{I|L}PMSV 4.3909 + + 110 1 2.06 98236.3 1.0 15039 5910 20950 HBL1_DMSO_200M_050219_1,20951 HBL1_DMSO_200M_050219_1,20951,RLLDLDIPMSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20952 103.05 800.0 113900.0 25 0 14967.0 + 16580 KDKSDLLNL 9 124 523.2962408849614 0 523.2974120974541 PEAK CID FTMS 0 0 0 20950 56001.265625 0.7511420391326936 2 -0.1232757568359375 2 Unmodified _KDKSDLLNL_ REV__ENST00000500118.2_1_8:6262544-6263480:-|nuORF 12.872603262515298 0.2793198337502027 3 {I|L}{I|L}A{I|L}{M(Oxidation (M))|F} 5 -1 16.454 0.0 0.0 1.5751 0.0 0.0 245.11962913144777 239.10433374576408 484.2239628772119 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}A{I|L}{M(Oxidation (M))|F} 1.5751 - 300 + 1 2.06 75963.6 0.3700000047683716 15040 5910 20950 HBL1_DMSO_200M_050219_1,20952 HBL1_DMSO_200M_050219_1,20952,KDKSDLLNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20953 103.05 95.0 1878500.0 25 0 340360.0 + 21336 LPFEPVPVI 9 65 1010.5917867424744 1009.5845102758744 1 1010.592333972454 MULTI CID FTMS 0 0 0 20950 865643.5 0.8125147833465367 -1 0.0627517700195312 3 Unmodified _LPFEPVPVI_ ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1 92.8221339359638 0.0138398038803217 3 [{I|L}P]{M(Oxidation (M))|F}EPVPV{I|L} 9 0 + 82.278 0.0 0.0 8.1497 8.1497 91.454 0.0 0.0 0.0 7.597046968434142 16.478174818886373 7.597046968434142 7.597046968434142 0 1.7302046884880935 1.3979400086720375 0.6382104921644451 0.0 + + [{I|L}P]{M(Oxidation (M))|F}EPVPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}PVPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EPVPV{I|L};[{I|L}P]{M(Oxidation (M))|F}DP{I|L}PV{I|L};[VP]E{M(Oxidation (M))|F}P{I|L}PV{I|L};[{I|L}P]D{M(Oxidation (M))|F}P{I|L}PV{I|L};[{M(Oxidation (M))|F}E]P{I|L}PVPV{I|L};[VP]{I|L}P{M(Oxidation (M))|F}EPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EVP{I|L}PV{I|L};[{I|L}P]VP{M(Oxidation (M))|F}EPV{I|L} 8.1497;7.3972;7.3801;6.8466;6.3923;6.3911;6.1869;6.0941;6.0941;6.0929 +;-;-;-;-;-;-;-;-;- + 812 1 2.06 120538.6 1.0 15041 5910 20950 HBL1_DMSO_200M_050219_1,20953 HBL1_DMSO_200M_050219_1,20953,LPFEPVPVI True True LPFEPVPVI 103.0541 1010.59233397245 25034083.75 20950.0 nc|ENSG00000133706|Q9P2J5-2|LARS1;;ENSG00000133706|ENST00000394434|LARS1 7.033273855845134 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20954 103.06 191.0 565710.0 25 0 27777.0 -1 0 92 932.4018259266325 0 932.2531616091728 PEAK CID FTMS 0 0 0 20950 177097.5625 1.0 0 0.0 4 3 {I|L} 1 -1 6.9897 0.0 0.0 0.37523 0.0 0.0 1264.418079488227 482.26230798892817 1746.6803874771551 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.37523 - 14 + 1 2.06 72479.7 1.0 15042 5910 20950 HBL1_DMSO_200M_050219_1,20954 HBL1_DMSO_200M_050219_1,20954, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20955 103.06 351.0 351550.0 25 0 39077.0 + 17107 KLFNEFIQL 9 107 576.3266459100661 1150.638738886932 2 576.3267089724541 MULTI CID FTMS 0 0 0 20950 167308.78125 0.9241251211064064 -3 0.132781982421875 5 Unmodified _KLFNEFIQL_ ENSG00000065183|ENST00000349139|WDR3 69.10491478415734 0.0214449631113747 3 [AG]{I|L}{M(Oxidation (M))|F}DK{M(Oxidation (M))|F}{I|L}Q{I|L} 10 4 + 76.979 0.0 0.0 6.6901 6.6901 78.919 0.0 0.0 0.0 5.743658554207826 16.53212513775344 5.743658554207826 0.5799194697768684 0 0.3807196863200844 1.3979400086720375 0.6747425010840047 1.2302046884880935 [AG]{I|L}{M(Oxidation (M))|F}DK{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]D{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}]{M(Oxidation (M))|F}DK{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]D{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}K{I|L}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}{I|L}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}K{I|L}Q{I|L};[AG]{I|L}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}K{I|L}Q{I|L};[AG]{I|L}{M(Oxidation (M))|F}DK{M(Oxidation (M))|F}{I|L}[AG]{I|L};[AG]D{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}K{I|L}Q{I|L};[AG]D{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}{I|L}[AG]{I|L} 6.6901;6.6397;6.1909;6.1175;5.948;5.9422;5.9063;5.8936;5.8559;5.8432 -;-;-;-;-;-;-;-;-;- 1251 1 2.06 94777.6 1.0 15043 5910 20950 HBL1_DMSO_200M_050219_1,20955 HBL1_DMSO_200M_050219_1,20955,KLFNEFIQL True True KLFNEFIQL 103.06415 576.326708972454 1809105.625 20950.0 ENSG00000065183|ENST00000349139|WDR3 4.940482298533122 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20956 103.07 557.0 211190.0 25 0 2727.8 -1 0 140 827.6157823262859 0 827.7540771365166 PEAK CID FTMS 0 0 0 -1 0 6 3 AYQ 3 -1 8.8123 0.0 0.0 0.53304 0.0 0.0 666.7634117211279 621.2784517877561 1288.041863508884 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AYQ 0.53304 - 206 + 1 2.06 81104.9 1.0 15044 5910 20950 HBL1_DMSO_200M_050219_1,20956 HBL1_DMSO_200M_050219_1,20956, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20957 103.08 612.0 608080.0 25 0 26436.0 -1 0 275 849.1855824777122 0 849.1343261599541 PEAK CID FTMS 0 0 0 -1 0 7 3 QGYY 4 -1 7.167 0.0 0.0 0.42249 0.0 0.0 1066.0817229614804 116.0512941949828 1182.1330171564632 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QGYY 0.42249 - 3306 + 1 2.06 231150.0 1.0 15045 5910 20950 HBL1_DMSO_200M_050219_1,20957 HBL1_DMSO_200M_050219_1,20957, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20958 103.09 397.0 415330.0 25 0 50396.0 + 45209 YQVEGMEWLRM 11 102 721.3334626485901 1440.65237236398 2 721.8363525271416 MULTI CID FTMS 0 0 0 20950 115704.796875 0.6942641670267632 -2 0.0848236083984375 8 Unmodified _YQVEGMEWLRM_ chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS;nc|ENSG00000119969|Q9NRZ9-7|HELLS;nc|ENSG00000119969|Q9NRZ9-8|HELLS 53.31671820480216 0.0992620867501809 3 [YQ]VEGMEW{I|L}{[WT]|[RM]} 11 0 + 80.463 0.0 0.0 5.5852 5.5852 76.028 0.0 0.0 0.0 0.9812692837230372 0.9812692837230372 0.9812692837230372 0.9812692837230372 0 1.0 1.3010299956639813 0.4247425010840047 0.5994850021680094 + + [YQ]VEGMEW{I|L}{[WT]|[RM]};[YQ]V[{I|L}T]EMGEVE[SG];[YQ]VWMEW{I|L}{[WT]|[RM]};[YQ]V[{I|L}T]EMWVE[SG];[YQ]V[{I|L}T]EMGPM{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]VMWEW{I|L}{[WT]|[RM]};[YQ]V[{I|L}T]EWMVE[SG];[YQ]V[{I|L}T]EWVME[SG];{[QV]|[N{I|L}]|[RA]|[KV]}Y[{I|L}T]EMGEVE[SG];{[QV]|[N{I|L}]|[RA]|[KV]}Y[{I|L}T]EMWVE[SG] 5.5852;5.5171;5.1287;5.056;5.056;4.9751;4.9024;4.866;4.8484;4.3874 +;-;-;-;-;-;-;-;-;- + 704 + 1 2.06 120717.6 1.0 15046 5910 20950 HBL1_DMSO_200M_050219_1,20958 HBL1_DMSO_200M_050219_1,20958,YQVEGMEWLRM True True YQVEGMEWLRM 103.09176 721.3353 1881061.875 20950.0 chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;;nc|ENSG00000119969|Q9NRZ9-5|HELLS;;nc|ENSG00000119969|Q9NRZ9-2|HELLS;;nc|ENSG00000119969|Q9NRZ9-3|HELLS;;nc|ENSG00000119969|Q9NRZ9-6|HELLS;;nc|ENSG00000119969|Q9NRZ9-7|HELLS;;ENSG00000119969|ENST00000348459|HELLS;;nc|ENSG00000119969|Q9NRZ9-4|HELLS;;nc|ENSG00000119969|Q9NRZ9-8|HELLS 7.585206190745036 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20959 103.11 800.0 33001.0 25 0 2399.1 + -1 CCLHKHHCYC 10 71 737.7849609255791 0 737.7849609255791 PEAK CID FTMS 0 0 0 -1 0 9 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))LHKHHC(Carbamidomethyl (C))YC(Carbamidomethyl (C))_ REV__ENSG00000164951|ENST00000297598|PDP1;REV__nc|ENSG00000164951|Q9P0J1-2|PDP1 0.4583401331227399 0.3961065659209837 3 P 1 -1 4.6041 0.0 0.0 0.31245 0.0 0.0 1165.4048084704957 208.07306848697505 1373.4778769574705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.31245 - 18 + 1 2.06 26237.6 0.5 15047 5910 20950 HBL1_DMSO_200M_050219_1,20959 HBL1_DMSO_200M_050219_1,20959,CCLHKHHCYC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20961 103.11 306.0 845180.0 25 0 20062.0 -1 0 123 872.4175932028735 3485.641266945094 4 873.1686889529228 MULTI CID FTMS 0 0 0 20960 477308.78125 0.0287169131354327 18 -0.341796875 1 3 [YQ]NPQP{M(Oxidation (M))|F}SV[Q{I|L}]Y 12 -1 17.393 0.0 0.0 0.49899 0.0 0.0 0.0 2017.943487974644 2017.943487974644 3.1679258810503512 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [YQ]NPQP{M(Oxidation (M))|F}SV[Q{I|L}]Y 0.49899 - 1242 1 2.049 164662.6 1.0 15048 5911 20960 HBL1_DMSO_200M_050219_1,20961 HBL1_DMSO_200M_050219_1,20961, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20962 103.12 510.0 116120.0 25 0 11249.0 -1 0 78 1074.1598688813729 3219.457777244319 3 1075.005664050579 MULTI CID FTMS 0 0 0 20960 21114.212890625 0.1809208427747755 -1 0.0731582641601562 2 3 {I|L}{I|L}{I|L}SQ{M(Oxidation (M))|F} 6 -1 34.462 0.0 0.0 1.0704 0.0 0.0 2162.896450195294 352.1154879205688 2515.011938115863 0.0 0.0 0.0 0.0 0 0.0 0.0 1.035666875892183 0.3494850021680094 {I|L}{I|L}{I|L}SQ{M(Oxidation (M))|F} 1.0704 - 140 + 1 2.049 43346.8 1.0 15049 5911 20960 HBL1_DMSO_200M_050219_1,20962 HBL1_DMSO_200M_050219_1,20962, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20963 103.13 336.0 118380.0 25 0 16273.0 -1 0 83 942.0697509859792 0 942.0685912966728 PEAK CID FTMS 0 0 0 20960 145837.734375 1.0 0 0.0 3 3 A 1 -1 2.7642 0.0 0.0 0.14687 0.0 0.0 1676.0190052905143 132.04609094791252 1808.0650962384268 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.14687 - 10 + 1 2.049 32897.9 1.0 15050 5911 20960 HBL1_DMSO_200M_050219_1,20963 HBL1_DMSO_200M_050219_1,20963, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20964 103.14 319.0 401950.0 25 0 60905.0 + 9630 FLMDFIHQV 9 110 575.2918470190384 1148.5691411048767 2 575.2913085818291 MULTI CID FTMS 0 0 0 20960 154540.765625 1.0 0 0.0 4 Unmodified _FLMDHVFIQ_ ENSG00000069248|ENST00000261396|NUP133 43.85829265575387 0.0542763391141878 3 EQ{I|L}{M(Oxidation (M))|F}GWK 7 8 41.851 0.0 0.0 3.6438 0.0 0.0 0.0 257.13045025294707 257.13045025294707 0.006762009782335 0.0 0.0 0.0 0 0.5 0.0 0.0 1.1382104921644451 EQ{I|L}{M(Oxidation (M))|F}GWK 3.6438 - 2226 + 1 2.049 97323.3 1.0 15051 5911 20960 HBL1_DMSO_200M_050219_1,20964 HBL1_DMSO_200M_050219_1,20964,FLMDHVFIQ True False FLMDFIHQV 103.13557 575.291308581829 1493118.25 20960.0 ENSG00000069248|ENST00000261396|NUP133 7.525702317555745 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20965 103.14 338.0 276970.0 25 0 13828.0 -1 0 157 925.0838912416172 0 925.1075927615166 PEAK CID FTMS 0 0 0 -1 0 5 3 G 1 -1 6.9897 0.0 0.0 0.3782 0.0 0.0 915.6329181260096 872.4542141230162 1788.0871322490257 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.3782 - 77 + 1 2.049 60201.1 1.0 15052 5911 20960 HBL1_DMSO_200M_050219_1,20965 HBL1_DMSO_200M_050219_1,20965, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20966 103.16 800.0 68053.0 25 0 1191.8 -1 0 112 1179.442309558392 0 1179.442309558392 PEAK CID FTMS 0 0 0 -1 0 6 3 {I|L} 1 -1 6.9897 0.0 0.0 0.29657 0.0 0.0 1064.304100462684 1176.4868868463502 2240.7909873090343 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.29657 - 18 + 1 2.049 40000.1 0.6399999856948853 15053 5911 20960 HBL1_DMSO_200M_050219_1,20966 HBL1_DMSO_200M_050219_1,20966, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20968 103.17 476.0 242180.0 25 0 27591.0 + 14355 IEVCFHRRRFF 11 112 755.397381515911 0 755.3981201052666 PEAK CID FTMS 0 0 0 20967 87330.9375 0.3682191698516149 3 -0.0625534057617187 1 Unmodified _IEVCFHRRRFF_ REV__ENST00000462039.5_1_6:74192220-74192271:+|nuORF 6.2057823575117 0.47618401536486 3 VE{I|L}{M(Oxidation (M))|F}E 5 -1 27.65 0.0 0.0 1.8326 0.0 0.0 772.4005411358723 116.0511950128539 888.4517361487262 0.0 0.0 0.0 0.0 0 0.0 0.0 1.9258337024346173 0.0 VE{I|L}{M(Oxidation (M))|F}E 1.8326 - 504 + 1 2.049 84808.4 1.0 15054 5912 20967 HBL1_DMSO_200M_050219_1,20968 HBL1_DMSO_200M_050219_1,20968,IEVCFHRRRFF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 20969 103.17 239.0 352340.0 25 0 14492.0 -1 0 122 982.0107302088736 0 982.2110473513604 PEAK CID FTMS 0 0 0 20967 18439.361328125 0.1558113997013212 1 -0.03875732421875 2 3 QD 2 -1 4.6927 0.0 0.0 0.23918 0.0 0.0 1583.8512811191156 132.0460604303344 1715.89734154945 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QD 0.23918 - 94 + 1 2.049 57515.2 1.0 15055 5912 20967 HBL1_DMSO_200M_050219_1,20969 HBL1_DMSO_200M_050219_1,20969, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20970 103.18 550.0 330830.0 25 0 25591.0 + 37229 TILDYINVV 9 90 1049.5881399709244 1048.5808635043245 1 1049.587207019329 MULTI CID FTMS 0 0 0 20967 113308.75 0.3804056290565659 -10 0.7166519165039062 3 Unmodified _TILDYINVV_ ENSG00000142512|ENST00000339313|SIGLEC10;ENST00000357375.4_1_19:51914355-51919928:-|nuORF;nc|ENSG00000142512|Q96LC7-2|SIGLEC10;nc|ENSG00000142512|Q96LC7-3|SIGLEC10;nc|ENSG00000142512|Q96LC7-4|SIGLEC10;nc|ENSG00000142512|Q96LC7-6|SIGLEC10;nc|ENSG00000142512|Q96LC7-7|SIGLEC10;nc|ENSG00000142512|Q96LC7-8|SIGLEC10;nc|ENSG00000142512|Q96LC7-9|SIGLEC10 65.23502041540118 0.0231836506122253 3 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}T{I|L}{I|L}NVV 9 4 + 84.58 0.0 0.0 8.0662 8.0662 89.436 0.0 0.0 0.0 13.979400086720377 16.478174818886373 13.979400086720377 5.496812376923046 0 0.5994850021680094 1.3979400086720375 2.1747425010840047 0.3807196863200844 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}T{I|L}{I|L}NVV;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}T{I|L}NVV;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}T{I|L}N{I|L}VV;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}T{I|L}{I|L}GGVV;[Y{I|L}]DT{I|L}{I|L}NVV;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}T{I|L}NV{I|L}V;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}TN{I|L}VV;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}T{I|L}GGVV;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}{I|L}TNVV;[Y{I|L}]D{I|L}T{I|L}NVV 8.0662;7.5419;7.1372;6.8249;6.733;6.6537;6.613;6.3007;6.2847;6.2088 -;-;-;-;-;-;-;-;-;- 4758 1 2.049 118407.2 1.0 15056 5912 20967 HBL1_DMSO_200M_050219_1,20970 HBL1_DMSO_200M_050219_1,20970,TILDYINVV True False TILDYINVV 103.18044 1049.58720701933 5563369.0 20967.0 nc|ENSG00000142512|Q96LC7-7|SIGLEC10;;nc|ENSG00000142512|Q96LC7-9|SIGLEC10;;nc|ENSG00000142512|Q96LC7-3|SIGLEC10;;nc|ENSG00000142512|Q96LC7-2|SIGLEC10;;nc|ENSG00000142512|Q96LC7-4|SIGLEC10;;ENSG00000142512|ENST00000339313|SIGLEC10;;ENST00000357375.4_1_19:51914355-51919928:-|nuORF;;nc|ENSG00000142512|Q96LC7-8|SIGLEC10;;nc|ENSG00000142512|Q96LC7-6|SIGLEC10 7.268091042836507 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20971 103.19 800.0 38529.0 25 0 920.32 -1 0 86 1196.0418405080336 0 1196.040698230267 PEAK CID FTMS 0 0 0 20967 96675.7734375 1.0 0 0.0 4 3 Q 1 -1 3.9794 0.0 0.0 0.1665 0.0 0.0 1430.0132941979048 828.9718111627561 2258.985105360661 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.1665 - 8 + 1 2.049 26372.0 0.550000011920929 15057 5912 20967 HBL1_DMSO_200M_050219_1,20971 HBL1_DMSO_200M_050219_1,20971, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20974 103.2 210.0 446950.0 25 0 49385.0 + 1623 AIPVFLEKL 9 81 515.3208434971758 1028.6271340611515 2 515.3210327029228 MULTI CID FTMS 0 0 0 20973 142256.8125 0.3865460890830584 4 -0.1212310791015625 1 Unmodified _ALLVIMSLGL_ nc|ENSG00000153827|Q14669-2|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF 26.88365393820708 0.3646707531412818 3 [{I|L}A]PV{M(Oxidation (M))|F}{I|L}EK{I|L} 9 5 + 68.382 0.0 0.0 6.6479 6.6479 92.226 0.0 0.0 0.0 14.279032320494808 12.252684618815088 12.252684618815088 16.264100213633768 0 0.3494850021680094 2.0 0.3494850021680094 0.0 [{I|L}A]PV{M(Oxidation (M))|F}{I|L}EK{I|L};[{I|L}A]{I|L}{[ET]|[MV]}{I|L}EK{I|L};{I|L}{I|L}[PG]{M(Oxidation (M))|F}{I|L}EK{I|L};{I|L}{I|L}A{[ET]|[MV]}{I|L}EK{I|L} 6.6479;5.0667;3.2311;3.1802 -;-;-;- 333 + 1 2.037 80787.9 1.0 15058 5914 20973 HBL1_DMSO_200M_050219_1,20974 HBL1_DMSO_200M_050219_1,20974,ALLVIMSLGL False False AIPVFLEKL 103.2043 515.321032702923 6058246.0 20973.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12;;ENST00000479037.5_1_2:230672327-230744801:-|nuORF 6.068447907765706 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20975 103.22 793.0 122070.0 25 0 1836.0 -1 0 158 1066.848803699017 0 1066.848803699017 PEAK CID FTMS 0 0 0 -1 0 2 3 T 1 -1 7.3464 0.0 0.0 0.34463 0.0 0.0 1805.5225452869029 222.08913599185783 2027.611681278761 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 T 0.34463 - 81 + 1 2.037 65652.9 1.0 15059 5914 20973 HBL1_DMSO_200M_050219_1,20975 HBL1_DMSO_200M_050219_1,20975, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20977 103.23 404.0 295730.0 25 0 52849.0 + 21334 LPFEPVPVI 9 87 505.7997507110066 1009.5849484888132 2 505.7997619509697 MULTI CID FTMS 0 0 0 20976 135157.78125 0.4366789393092817 -7 0.2706527709960937 1 Unmodified _LPFEPVPVI_ ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1 38.15118350030904 0.0856056900103839 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}PV 6 4 42.664 0.0 0.0 4.2259 0.0 0.0 0.0 324.19138503541905 324.19138503541905 10.779550148593486 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}PV 4.2259 - 244 1 2.037 93757.8 1.0 15060 5915 20976 HBL1_DMSO_200M_050219_1,20977 HBL1_DMSO_200M_050219_1,20977,LPFEPVPVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20978 103.23 393.0 107610.0 25 0 4845.5 -1 0 87 1159.8811561370094 0 1159.888110339642 PEAK CID FTMS 0 0 0 -1 0 2 3 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.30157 0.0 0.0 1879.555389811325 288.09992395572505 2167.6553137670503 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.30157 - 38 + 1 2.037 33138.7 1.0 15061 5915 20976 HBL1_DMSO_200M_050219_1,20978 HBL1_DMSO_200M_050219_1,20978, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20980 103.25 470.0 139690.0 25 0 5226.9 -1 0 131 951.580624401397 0 951.3084594607352 PEAK CID FTMS 0 0 0 -1 0 1 3 K{I|L} 2 -1 10.701 0.0 0.0 0.56287 0.0 0.0 1361.813640304944 295.14167200260005 1656.955312307544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 K{I|L} 0.56287 - 105 + 1 2.037 50029.1 1.0 15062 5916 20979 HBL1_DMSO_200M_050219_1,20980 HBL1_DMSO_200M_050219_1,20980, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20981 103.25 495.0 75114.0 25 0 2627.0 -1 0 90 1016.518054187298 0 1016.518054187298 PEAK CID FTMS 0 0 0 -1 0 2 3 S 1 -1 5.4846 0.0 0.0 0.27004 0.0 0.0 1718.876762816199 222.08822046451408 1940.964983280713 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.27004 - 20 + 1 2.037 33916.1 1.0 15063 5916 20979 HBL1_DMSO_200M_050219_1,20981 HBL1_DMSO_200M_050219_1,20981, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20982 103.27 800.0 233710.0 25 0 16187.0 + 5518 DLYPGIPVI 9 142 986.5554400937642 985.5481636271642 1 986.5572997927666 MULTI CID FTMS 0 0 0 20979 97231.140625 0.6719434464599939 -6 0.2024688720703125 3 Unmodified _DLYPGIPVI_ ENSG00000174840|ENST00000311180|PDE12;ENST00000487257.1_2_3:57545269-57545728:+|nuORF;nc|ENSG00000174840|Q6L8Q7-2|PDE12 44.40701690623563 0.0526327925666318 3 [VP]ADY{I|L} 6 7 54.698 0.0 0.0 5.55 0.0 0.0 0.0 324.190164848803 324.190164848803 31.805234507957888 0.0 0.0 0.0 0 0.805462187404089 1.3010299956639813 1.1237125054200234 0.0 [VP]ADY{I|L} 5.55 - 1522 1 2.037 119516.1 0.4699999988079071 15064 5916 20979 HBL1_DMSO_200M_050219_1,20982 HBL1_DMSO_200M_050219_1,20982,DLYPGIPVI True True DLYPGIPVI 103.26799 986.557299792767 1209847.5 20979.0 nc|ENSG00000174840|Q6L8Q7-2|PDE12;;ENSG00000174840|ENST00000311180|PDE12;;ENST00000487257.1_2_3:57545269-57545728:+|nuORF 4.324814240137736 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20983 103.28 399.0 40516.0 25 0 1523.2 -1 0 49 1120.3249530727903 0 1120.396655261517 PEAK CID FTMS 0 0 0 20979 39854.9453125 1.0 0 0.0 4 3 {I|L} 1 -1 6.9897 0.0 0.0 0.31223 0.0 0.0 1119.0933132727312 1003.4149874322874 2122.5083007050184 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.31223 - 4 + 1 2.037 21163.8 1.0 15065 5916 20979 HBL1_DMSO_200M_050219_1,20983 HBL1_DMSO_200M_050219_1,20983, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20984 103.29 800.0 153200.0 25 0 8032.6 -1 0 167 925.4470092654228 0 925.4470092654228 PEAK CID FTMS 0 0 0 -1 0 5 3 {I|L}R 2 -1 14.464 0.0 0.0 0.78231 0.0 0.0 1281.5420155017457 295.1410311334594 1576.6830466352048 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 {I|L}R 0.78231 - 296 + 1 2.037 77616.3 0.949999988079071 15066 5916 20979 HBL1_DMSO_200M_050219_1,20984 HBL1_DMSO_200M_050219_1,20984, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20986 103.31 703.0 588870.0 25 0 26778.0 -1 0 275 830.6901143405122 0 830.5557128787041 PEAK CID FTMS 0 0 0 20985 18779.162109375 0.3185495781995627 1 -0.0299758911132812 1 3 VQGYY 5 -1 14.157 0.0 0.0 0.85314 0.0 0.0 930.0136992847368 116.05130945377186 1046.0650087385088 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VQGYY 0.85314 - 1191 + 1 2.106 259933.9 1.0 15067 5917 20985 HBL1_DMSO_200M_050219_1,20986 HBL1_DMSO_200M_050219_1,20986, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20987 103.32 800.0 145350.0 25 0 12868.0 + + 9565 FILPIGATV 9 107 930.5667299061016 929.5594534395016 1 930.113818347454 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _FLIPIGAVT_ nc|ENSG00000105281|Q15758-3|SLC1A5;ENSG00000105281|ENST00000542575|SLC1A5;nc|ENSG00000115902|P43007-2|SLC1A4;nc|ENSG00000105281|Q15758-2|SLC1A5;ENSG00000115902|ENST00000234256|SLC1A4 32.116972079565 0.1225432171549407 3 [{I|L}P]GATV{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 -1 + 18.539 0.0 0.0 1.9944 1.9944 71.321 0.0 0.0 0.0 1.487643218550602 -0.7443318573297297 -0.7443318573297297 3.4678748622465623 0 0.0 0.0 0.2887254899964357 0.0 [{I|L}P]GATV{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]QTV{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]{M(Oxidation (M))|F}{I|L}Q{I|L}{[TV]|[{I|L}S]};[QP]{I|L}TV{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}T][WR]{I|L}{[QN]|[E{I|L}]|[KN]};[VP]AATV{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]{M(Oxidation (M))|F}{I|L}{I|L}GA{[TV]|[{I|L}S]};[{I|L}P]{M(Oxidation (M))|F}{I|L}{I|L}Q{[TV]|[{I|L}S]};[{I|L}P]{M(Oxidation (M))|F}{I|L}QT[{I|L}V];[{I|L}P]{M(Oxidation (M))|F}{I|L}GA{I|L}{[TV]|[{I|L}S]} 1.9944;1.6213;1.5722;1.4641;1.4607;1.3959;1.2976;1.2483;1.2483;1.1488 -;-;-;-;-;-;-;-;-;- 556 1 2.106 78067.7 0.3100000023841858 15068 5917 20985 HBL1_DMSO_200M_050219_1,20987 HBL1_DMSO_200M_050219_1,20987,FLIPIGAVT False False FILPIGATV 103.31897 930.113818347454 986139.5625 20985.0 nc|ENSG00000105281|Q15758-3|SLC1A5;;ENSG00000105281|ENST00000542575|SLC1A5;;nc|ENSG00000115902|P43007-2|SLC1A4;;nc|ENSG00000105281|Q15758-2|SLC1A5;;ENSG00000115902|ENST00000234256|SLC1A4 5.681857426961263 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20990 103.33 186.0 184990.0 25 0 10756.0 -1 0 80 948.4861422381972 0 948.4901611208916 PEAK CID FTMS 0 0 0 20989 104508.1171875 0.0097596152701275 18 -0.2914199829101562 1 3 {I|L}VMAE 5 -1 31.855 0.0 0.0 1.681 0.0 0.0 1193.6017267597945 155.0619295709594 1348.6636563307538 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3807196863200843 0.0 {I|L}VMAE 1.681 - 339 + 1 2.106 29240.1 1.0 15069 5919 20989 HBL1_DMSO_200M_050219_1,20990 HBL1_DMSO_200M_050219_1,20990, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20991 103.34 616.0 226610.0 25 0 60736.0 + 2209 AQAQEVFFL 9 113 526.7742661587031 1051.533979384206 2 526.7740966677666 MULTI CID FTMS 0 0 0 20989 74471.453125 0.1738608370026633 -15 0.612945556640625 2 Unmodified _AQAQEVFFL_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 88.90359156742426 0.0153595091083554 3 {NN|[MP]|[D{I|L}]|[EV]}QAAGA{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 10 7 + 73.325 0.0 0.0 6.9731 6.9731 80.102 0.0 0.0 0.0 2.59729516507592 8.264837301042718 2.59729516507592 0.8234197701310109 0 0.5994850021680094 1.3010299956639813 1.2544321917401078 1.9291746928241125 {NN|[MP]|[D{I|L}]|[EV]}QAAGA{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}QAQA{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}QAAQ{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};[QA]EVAGA{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};[QA]EVQA{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}AGAAGA{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};[QA]EVAQ{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}AGAQA{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};[QA]EQAV{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F};[QA]EAGAV{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 6.9731;6.8948;6.7517;6.7261;6.6478;6.5722;6.5047;6.4897;6.4565;6.3645 -;-;-;-;-;-;-;-;-;- 2730 1 2.106 111442.1 1.0 15070 5919 20989 HBL1_DMSO_200M_050219_1,20991 HBL1_DMSO_200M_050219_1,20991,AQAQEVFFL True True AQAQEVFFL 103.33976 526.774096667767 5464653.5 20989.0 ENSG00000170248|ENST00000307296|PDCD6IP;;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 4.253519217173259 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20993 103.35 650.0 79818.0 25 0 3414.2 + -1 STINLLQTL 9 91 1002.5877084669736 0 1002.586230456829 PEAK CID FTMS 0 0 0 20992 22209.830078125 0.2219946396905132 1 -0.013885498046875 1 ENST00000437318.5_1_15:20645779-20651177:-|nuORF;nc|ENSG00000290376|Q9BVR0|HERC2P3;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;ENST00000530420.5_1_15:28896588-28900598:+|nuORF;ENSG00000128731|ENST00000261609|HERC2;ENST00000562229.1_1_16:33110949-33113283:-|nuORF;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;ENST00000424611.5_1_15:20644728-20658919:-|nuORF;ENST00000529624.5_3_15:28877823-28916776:+|nuORF 3 {I|L}TQ{I|L}TSV 7 -1 55.482 0.0 0.0 2.7697 0.0 0.0 1019.5942879282846 238.1207979791625 1257.7150859074472 0.0 0.0 0.0 0.0 0 0.0 0.0 1.579689690656103 0.8494850021680094 {I|L}TQ{I|L}TSV 2.7697 - 1533 + 1 2.106 41797.9 1.0 15071 5920 20992 HBL1_DMSO_200M_050219_1,20993 HBL1_DMSO_200M_050219_1,20993, False False STINLLQTL 103.35366 1002.58623045683 1385676.375 20992.0 ENST00000437318.5_1_15:20645779-20651177:-|nuORF;;nc|ENSG00000290376|Q9BVR0|HERC2P3;;ENST00000430598.5_1_15:20613931-20667676:-|nuORF;;ENST00000530420.5_1_15:28896588-28900598:+|nuORF;;ENSG00000128731|ENST00000261609|HERC2;;ENST00000562229.1_1_16:33110949-33113283:-|nuORF;;ENST00000428453.5_1_15:20588586-20667676:-|nuORF;;ENST00000424611.5_1_15:20644728-20658919:-|nuORF;;ENST00000529624.5_3_15:28877823-28916776:+|nuORF 3.332676728566488 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20996 103.37 243.0 365590.0 25 0 28257.0 -1 0 106 872.9190091432025 0 872.9187499880791 PEAK CID FTMS 0 0 0 20995 310806.53125 0.9249241242624924 3 -0.060699462890625 1 3 {I|L}Y{I|L}AEV 6 -1 23.621 0.0 0.0 1.3545 0.0 0.0 805.3025686283382 247.12044643410485 1052.423015062443 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y{I|L}AEV 1.3545 - 83 + 1 2.106 69966.6 1.0 15072 5922 20995 HBL1_DMSO_200M_050219_1,20996 HBL1_DMSO_200M_050219_1,20996, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 20997 103.37 325.0 292330.0 25 0 63216.0 + 21337 LPFEPVPVI 9 67 1010.5917867424744 1009.5845102758744 1 1012.596606433392 MULTI CID FTMS 0 0 0 20995 203843.984375 0.7838226190904628 11 -0.1352691650390625 2 Unmodified _LPFEPVPVI_ ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1 30.22481116460888 0.1466181017706357 3 [VP]{I|L}[KS]C(Carbamidomethyl (C)) 6 8 25.748 0.0 0.0 2.5504 0.0 0.0 0.0 322.1857674300034 322.1857674300034 3.374146581359618 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.2614393726401688 0.0 [VP]{I|L}[KS]C(Carbamidomethyl (C)) 2.5504 - 535 1 2.106 68856.7 1.0 15073 5922 20995 HBL1_DMSO_200M_050219_1,20997 HBL1_DMSO_200M_050219_1,20997,LPFEPVPVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 20999 103.38 265.0 265740.0 25 0 40904.0 + 22481 LPVPAFNVI 9 85 485.29237573358944 968.5701985339788 2 485.2922851443291 MULTI CID FTMS 0 0 0 20998 223084.703125 0.1316989888044493 -17 0.5424957275390625 1 Unmodified _LPVPAFNVI_ ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000111674|P09104-2|ENO2 34.18733598223924 0.1073653526364521 3 [PA]{M(Oxidation (M))|F}NVP{I|L}V{I|L} 9 6 + 45.3 0.0 0.0 4.677 4.677 72.268 0.0 0.0 0.0 0.5799194697768684 10.330145895351848 0.5799194697768684 0.5799194697768684 0 0.7429928190999391 0.9208187539523752 0.0 0.0 [PA]{M(Oxidation (M))|F}NVP{I|L}V{I|L};[{I|L}P]A{M(Oxidation (M))|F}NPVV{I|L};[PA]{M(Oxidation (M))|F}N{I|L}PVV{I|L};[{I|L}P][PG]{I|L}{M(Oxidation (M))|F}NV{I|L};[{I|L}P]V[PA]{M(Oxidation (M))|F}NV{I|L};[PA]{M(Oxidation (M))|F}{I|L}NPVV{I|L};[PA]{M(Oxidation (M))|F}NP{I|L}VV{I|L};[PA]{M(Oxidation (M))|F}NPV{I|L}V{I|L};[{I|L}P]A[VP]{M(Oxidation (M))|F}NV{I|L};[PA]{M(Oxidation (M))|F}GGVP{I|L}V{I|L} 4.677;4.6171;4.548;4.1062;4.1062;4.0554;3.9863;3.8045;3.7954;3.7263 -;-;-;-;+;-;-;-;-;- + 784 1 2.106 62012.4 1.0 15074 5923 20998 HBL1_DMSO_200M_050219_1,20999 HBL1_DMSO_200M_050219_1,20999,LPVPAFNVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21000 103.39 317.0 178720.0 25 0 11550.0 + 2579 ASITSFLTV 9 84 938.518996711116 937.511720244516 1 938.5189697146416 MULTI CID FTMS 0 0 0 20998 121710.5546875 0.643545244442212 -3 0.0323028564453125 2 Unmodified _ASITSFLTV_ ENSG00000115760|ENST00000421745|BIRC6 46.020951573049366 0.0490941689151868 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}AS{I|L}TV 9 4 + 52.85 0.0 0.0 5.6373 5.6373 74.852 0.0 0.0 0.0 0.2557626122369072 8.938937347570082 0.2557626122369072 0.2557626122369072 0 0.5 0.0 2.4361818737241734 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}AS{I|L}TV;[{I|L}T]S{M(Oxidation (M))|F}AS{I|L}TV;[{I|L}T]SA{M(Oxidation (M))|F}S{I|L}TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}TAS{I|L}TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TA{I|L}S{I|L}TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}{[TV]|[{I|L}S]}ATV;[{I|L}T]S{M(Oxidation (M))|F}{[TV]|[{I|L}S]}ATV;[{I|L}T]SA[Y{I|L}]ATV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}T{[TV]|[{I|L}S]}ATV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}TV 5.6373;5.61;5.3311;5.0767;4.6128;4.2279;4.2006;3.9217;3.6673;3.0988 -;-;-;-;-;-;-;-;-;- 1641 1 2.106 43131.3 1.0 15075 5923 20998 HBL1_DMSO_200M_050219_1,21000 HBL1_DMSO_200M_050219_1,21000,ASITSFLTV True False ASITSFLTV 103.38532 938.518969714642 1474018.5 20998.0 ENSG00000115760|ENST00000421745|BIRC6 3.5573226610819497 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21001 103.4 737.0 222210.0 25 0 26977.0 + 45007 YPSYPALII 9 95 1036.5706739642271 1035.5633974976272 1 1036.573413074017 MULTI CID FTMS 0 0 0 20998 129040.5234375 0.7507810225142666 11 -0.134552001953125 3 Unmodified _YPSYPALII_ ENSG00000096070|ENST00000357641|BRPF3;ENSG00000100425|ENST00000404760|BRD1;ENSG00000156983|ENST00000383829|BRPF1;ENST00000479985.1_1_22:50169237-50169760:-|nuORF;nc|ENSG00000096070|Q9ULD4-2|BRPF3;nc|ENSG00000096070|Q9ULD4-3|BRPF3;nc|ENSG00000100425|O95696|BRD1;nc|ENSG00000156983|P55201-3|BRPF1;nc|ENSG00000156983|P55201-4|BRPF1;nc|ENSG00000156983|P55201|BRPF1 123.09622228370866 0.00035690919455 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SAPY{I|L}{I|L}{I|L} 9 2 + 79.98 0.0 0.0 7.7233 7.7233 80.932 0.0 0.0 0.0 19.05333107397176 16.478174818886366 16.478174818886366 0.2473594786049204 0 1.0 1.5228787452803376 2.0471062485323515 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SAPY{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SY[PA]{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SA{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SAP{I|L}Y{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SA{I|L}PY{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASPY{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AS{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}S{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASP{I|L}Y{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SAP{I|L}{I|L}Y{I|L} 7.7233;7.6994;7.615;7.5478;7.4395;6.7615;6.6532;6.6298;6.5859;6.5797 -;+;-;-;-;-;-;-;-;- + 1337 1 2.106 108222.6 1.0 15076 5923 20998 HBL1_DMSO_200M_050219_1,21001 HBL1_DMSO_200M_050219_1,21001,YPSYPALII True True YPSYPALII 103.39813 1036.57341307402 11095690.0 20998.0 ENST00000479985.1_1_22:50169237-50169760:-|nuORF;;nc|ENSG00000156983|P55201-4|BRPF1;;ENSG00000156983|ENST00000383829|BRPF1;;ENSG00000096070|ENST00000357641|BRPF3;;ENSG00000100425|ENST00000404760|BRD1;;nc|ENSG00000096070|Q9ULD4-2|BRPF3;;nc|ENSG00000096070|Q9ULD4-3|BRPF3;;nc|ENSG00000156983|P55201-3|BRPF1;;nc|ENSG00000156983|P55201|BRPF1;;nc|ENSG00000100425|O95696|BRD1 5.5332770347595215 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21003 103.41 800.0 12418.0 25 0 702.11 -1 0 29 1186.518603503704 0 1186.518603503704 PEAK CID FTMS 0 0 0 -1 0 1 3 K 1 -1 3.9794 0.0 0.0 0.16783 0.0 0.0 1408.6069569079957 831.3068941705686 2239.913851078564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.16783 - 2 + 1 2.106 17326.9 0.4900000095367431 15077 5924 21002 HBL1_DMSO_200M_050219_1,21003 HBL1_DMSO_200M_050219_1,21003, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21004 103.42 218.0 171620.0 25 0 10171.0 -1 0 89 860.5670043826103 0 860.5670043826103 PEAK CID FTMS 0 0 0 -1 0 2 3 S 1 -1 5.4846 0.0 0.0 0.31903 0.0 0.0 1513.0131916492064 116.05127893619374 1629.0644705854002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.31903 - 10 + 1 2.106 29483.5 1.0 15078 5924 21002 HBL1_DMSO_200M_050219_1,21004 HBL1_DMSO_200M_050219_1,21004, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21007 103.44 800.0 117550.0 25 0 21507.0 + 30880 RIPDIVLWPT 10 72 605.353301329497 1208.6920497257938 2 605.3530761599541 MULTI CID FTMS 0 0 0 21006 66306.7265625 0.5301816636247906 5 -0.0417861938476562 1 Unmodified _RIPDIVLWPT_ ENSG00000018510|ENST00000264167|AGPS;ENST00000460342.1_1_2:178301730-178305781:+|nuORF 26.020703789607367 0.3840598856887971 3 [R{I|L}][DP]{I|L}V{I|L}WTP 10 2 + 53.993 0.0 0.0 4.467 4.467 84.854 0.0 0.0 0.0 11.407330037915315 36.93574972449312 11.407330037915315 15.228787452803374 0 1.0858955865873612 1.0457574905606752 0.0 0.0 [R{I|L}][DP]{I|L}V{I|L}WTP;[WP]VV{I|L}V{I|L}WTP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[SA]|[TG]}{I|L}V{I|L}[HK]TP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AA{I|L}V{I|L}[HK]TP;{[ES]|[DT]|[{I|L}C]}[VS]{I|L}V{I|L}[HK]TP;[R{I|L}][DP]{I|L}V{I|L}AA{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[SA]|[TG]}{I|L}V{I|L}VV[HQ];[R{I|L}][DP]{I|L}V[RV]{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AA{I|L}V{I|L}VV[HQ] 4.467;3.2071;3.0969;2.9512;2.9323;2.8293;1.9678;1.8716;1.8221 -;-;-;-;-;-;-;-;- 151 1 2.106 70720.1 0.4900000095367431 15079 5926 21006 HBL1_DMSO_200M_050219_1,21007 HBL1_DMSO_200M_050219_1,21007,RIPDIVLWPT False True RIPDIVLWPT 103.43883 605.353076159954 1185773.75 21006.0 ENSG00000018510|ENST00000264167|AGPS;;ENST00000460342.1_1_2:178301730-178305781:+|nuORF 8.10190455118815 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21012 103.46 611.0 188180.0 25 0 11349.0 + 37230 TILDYINVV 9 98 1049.5881399709244 1048.5808635043245 1 1049.587695300579 MULTI CID FTMS 0 0 0 21011 179583.25 0.6029055936480858 8 -0.2086639404296875 1 Unmodified _TILDYINVV_ ENSG00000142512|ENST00000339313|SIGLEC10;ENST00000357375.4_1_19:51914355-51919928:-|nuORF;nc|ENSG00000142512|Q96LC7-2|SIGLEC10;nc|ENSG00000142512|Q96LC7-3|SIGLEC10;nc|ENSG00000142512|Q96LC7-4|SIGLEC10;nc|ENSG00000142512|Q96LC7-6|SIGLEC10;nc|ENSG00000142512|Q96LC7-7|SIGLEC10;nc|ENSG00000142512|Q96LC7-8|SIGLEC10;nc|ENSG00000142512|Q96LC7-9|SIGLEC10 103.74828524460852 0.0090107942103208 3 [{I|L}T]{I|L}DY{I|L}NVV 9 0 + 98.159 0.0 0.0 9.3611 9.3611 92.129 0.0 0.0 0.0 12.20159303405957 16.478174818886373 12.20159303405957 6.786662482156345 0 0.5994850021680094 1.5228787452803376 2.329689690656103 0.805462187404089 + + [{I|L}T]{I|L}DY{I|L}NVV;[{I|L}T]YD{I|L}{I|L}NVV;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}T{I|L}{I|L}NVV;[Y{I|L}]DT{I|L}{I|L}NVV;[{I|L}T]{I|L}D{I|L}YNVV;[{I|L}T]YVE{I|L}NVV;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}T{I|L}NVV;[{I|L}T]{I|L}DY{I|L}GGVV;[Y{I|L}]D{I|L}T{I|L}NVV;[Y{I|L}]TD{I|L}{I|L}NVV 9.3611;8.7139;8.1975;8.0934;8.0717;7.9579;7.7924;7.7148;7.6883;7.5423 +;-;-;-;-;-;-;-;-;- + 6654 1 2.106 79361.0 1.0 15080 5930 21011 HBL1_DMSO_200M_050219_1,21012 HBL1_DMSO_200M_050219_1,21012,TILDYINVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21015 103.47 201.0 310610.0 25 0 11391.0 -1 0 120 939.4707438559656 1876.9269347787315 2 939.4725829958916 MULTI CID FTMS 0 0 0 21014 98354.84375 1.0 0 0.0 1 3 T{I|L}{[ES]|[DT]|[{I|L}C]}G{I|L}{[QG]|[NA]} 8 -1 24.403 0.0 0.0 1.3001 0.0 0.0 1073.499091616425 0.0 1073.499091616425 0.0 9.186815808375052 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.3807196863200844 T{I|L}{[ES]|[DT]|[{I|L}C]}G{I|L}{[QG]|[NA]} 1.3001 - 780 + 1 2.106 41346.0 1.0 15081 5932 21014 HBL1_DMSO_200M_050219_1,21015 HBL1_DMSO_200M_050219_1,21015, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21016 103.48 147.0 882650.0 25 0 63322.0 11890 GLVIGAVYL 9 123 904.5514131473436 903.5441366807436 1 904.5520507693292 MULTI CID FTMS 0 0 0 21014 328950.09375 0.1091877666419601 23 -0.7195587158203125 2 Unmodified _GLVIGAVYL_ ENSG00000102100|ENST00000247138|SLC35A2;nc|ENSG00000102100|P78381-2|SLC35A2;nc|ENSG00000102100|P78381-4|SLC35A2;nc|ENSG00000102100|P78381-5|SLC35A2 36.46614268402704 0.0948557732959553 3 {[QV]|[N{I|L}]|[RA]|[KV]}VA{I|L}VY{I|L} 8 4 + 54.558 0.0 0.0 6.0382 6.0382 80.824 0.0 0.0 0.0 5.0745116923876665 13.26606256887672 5.0745116923876665 3.0102999566398125 0 0.6421590589602533 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}VA{I|L}VY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}G{I|L}VY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VA{I|L}YV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}AVY{I|L};[KP]TA{I|L}VY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VAV{I|L}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AV{I|L}VY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}G{I|L}YV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VAVY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}AVVY{I|L} 6.0382;5.705;5.6168;5.5101;5.4766;5.4157;5.3719;5.2837;5.177;5.177 -;-;-;-;-;-;-;-;-;- 1852 1 2.106 85747.6 1.0 15082 5932 21014 HBL1_DMSO_200M_050219_1,21016 HBL1_DMSO_200M_050219_1,21016,GLVIGAVYL True False AVIGGLVYL 103.47717 904.552050769329 25696614.0 21014.0 ENSG00000102158|ENST00000618282|MAGT1;;ENST00000476168.1_1_X:77112151-77150907:-|nuORF 4.290003458658855 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21017 103.48 188.0 149120.0 25 0 3500.3 -1 0 74 960.9849670925812 0 960.9848510622978 PEAK CID FTMS 0 0 0 21014 150438.921875 1.0 0 0.0 3 3 {I|L} 1 -1 4.6041 0.0 0.0 0.2398 0.0 0.0 1376.6638906287185 427.1850069635376 1803.848897592256 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.2398 - 30 + 1 2.106 26263.9 1.0 15083 5932 21014 HBL1_DMSO_200M_050219_1,21017 HBL1_DMSO_200M_050219_1,21017, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21018 103.49 698.0 232710.0 25 0 12362.0 + -1 CRWHIWHKQCW 11 206 848.8892089724541 0 848.8892089724541 PEAK CID FTMS 0 0 0 -1 0 4 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))RWHIWHKQC(Carbamidomethyl (C))W_ REV__ENSG00000108406|ENST00000251241|DHX40;REV__ENST00000587125.1_1_17:58040633-58079710:-|nuORF;REV__nc|ENSG00000108406|Q8IX18-2|DHX40;REV__nc|ENSG00000108406|Q8IX18-3|DHX40;REV__nc|ENSG00000108406|Q8IX18-4|DHX40 0.3070304955306653 0.4761840153648598 3 NE 2 -1 9.464 0.0 0.0 0.55809 0.0 0.0 679.3006214587768 770.3476656549436 1449.6482871137205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NE 0.55809 - 1158 + 1 2.106 104898.5 1.0 15084 5932 21014 HBL1_DMSO_200M_050219_1,21018 HBL1_DMSO_200M_050219_1,21018,CRWHIWHKQCW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21020 103.5 364.0 559930.0 25 0 25514.0 -1 0 144 1159.20677502477 3474.59849567451 3 1159.541308581829 MULTI CID FTMS 0 0 0 21019 357012.75 0.5902296305978496 -1 0.0251541137695312 1 3 [Y{M(Oxidation (M))|F}][{I|L}V][DP]QDAN{I|L}NPMN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 30 -1 [Y{M(Oxidation (M))|F}][{I|L}V][DP]QDAN{I|L}NP + + 105.8 39.328 2.6453 3.045 3.045 50.286 0.0 0.0 0.0 0.0 46.91596063762377 0.0 0.0 0 1.924742501084005 0.0 0.3494850021680094 1.960409376976188 [Y{M(Oxidation (M))|F}][{I|L}V][DP]QDAN{I|L}NPMN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.045 - 37874 + 1 2.106 121929.6 1.0 15085 5933 21019 HBL1_DMSO_200M_050219_1,21020 HBL1_DMSO_200M_050219_1,21020, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21021 103.51 275.0 284230.0 25 0 43399.0 + 21335 LPFEPVPVI 9 78 505.7997507110066 1009.5849484888132 2 505.7996703982353 MULTI CID FTMS 0 0 0 21019 111182.734375 0.3592183747569518 11 -0.4044342041015625 2 Unmodified _LPFEPVPVI_ ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1 38.15118350030904 0.0856056900103839 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}PV 6 4 37.893 0.0 0.0 3.7533 0.0 0.0 0.0 324.1910234158707 324.1910234158707 14.960762528683702 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}PV 3.7533 - 225 1 2.106 66319.3 1.0 15086 5933 21019 HBL1_DMSO_200M_050219_1,21021 HBL1_DMSO_200M_050219_1,21021,LPFEPVPVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21023 103.51 297.0 271610.0 25 0 9166.9 -1 0 96 782.1532470583916 0 782.1532470583916 PEAK CID FTMS 0 0 0 -1 0 1 3 {I|L}SA{I|L}M 5 -1 28.443 0.0 0.0 1.8206 0.0 0.0 371.6466297595581 672.3321016900999 1043.978731449658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}SA{I|L}M 1.8206 - 107 + 1 2.106 63393.3 1.0 15087 5934 21022 HBL1_DMSO_200M_050219_1,21023 HBL1_DMSO_200M_050219_1,21023, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21024 103.52 420.0 200100.0 25 0 43597.0 + 37853 TLVDEVFRI 9 71 546.3083267538891 1090.602100574578 2 546.3082763552666 MULTI CID FTMS 0 0 0 21022 191952.921875 0.8507991703227639 -6 0.0637435913085937 2 Unmodified _TLVDEVFRI_ ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2 38.17557092003332 0.0854718145212029 3 [{I|L}T]VDEV{M(Oxidation (M))|F}R{I|L} 9 0 + 82.154 0.0 0.0 7.5329 7.5329 88.852 0.0 0.0 0.0 59.65746338349267 10.908458057352192 10.908458057352192 6.020599913279625 0 0.805462187404089 2.0 0.3807196863200844 0.3807196863200844 + + [{I|L}T]VDEV{M(Oxidation (M))|F}R{I|L};[{I|L}T]VD{I|L}D{M(Oxidation (M))|F}R{I|L};[{I|L}T]V{I|L}DD{M(Oxidation (M))|F}R{I|L};[{I|L}T]{I|L}VDD{M(Oxidation (M))|F}R{I|L};[{I|L}T]{I|L}DDV{M(Oxidation (M))|F}R{I|L} 7.5329;6.9809;6.3558;6.0797;5.4645 +;-;-;-;- + 162 + 1 2.106 68650.2 1.0 15088 5934 21022 HBL1_DMSO_200M_050219_1,21024 HBL1_DMSO_200M_050219_1,21024,TLVDEVFRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21025 103.53 448.0 209770.0 25 0 8650.5 -1 0 107 1000.897448718548 0 1000.897448718548 PEAK CID FTMS 0 0 0 -1 0 3 3 T{I|L}N 3 -1 17.58 0.0 0.0 0.8791 0.0 0.0 1388.4743692499735 280.10981165103755 1668.584180901011 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 T{I|L}N 0.8791 - 141 + 1 2.106 59622.3 1.0 15089 5934 21022 HBL1_DMSO_200M_050219_1,21025 HBL1_DMSO_200M_050219_1,21025, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21026 103.54 383.0 46010.0 25 0 3033.1 -1 0 49 1079.619686299979 0 1079.482104480267 PEAK CID FTMS 0 0 0 -1 0 4 3 A 1 -1 6.9897 0.0 0.0 0.32401 0.0 0.0 1209.785746035702 873.3709200494749 2083.1566660851768 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.32401 - 3 + 1 2.106 23466.5 1.0 15090 5934 21022 HBL1_DMSO_200M_050219_1,21026 HBL1_DMSO_200M_050219_1,21026, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21027 103.54 419.0 16575.0 25 0 1123.9 -1 0 22 1194.8140780822037 0 1194.443286120892 PEAK CID FTMS 0 0 0 -1 0 5 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.106 18012.3 1.0 15091 5934 21022 HBL1_DMSO_200M_050219_1,21027 HBL1_DMSO_200M_050219_1,21027, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21028 103.55 151.0 32392.0 25 0 3812.0 -1 0 15 1065.5422335150563 0 1065.055102527142 PEAK CID FTMS 0 0 0 -1 0 6 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.106 14737.7 1.0 15092 5934 21022 HBL1_DMSO_200M_050219_1,21028 HBL1_DMSO_200M_050219_1,21028, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21030 103.56 800.0 120380.0 25 0 11608.0 15094 IMLGAGLIKI 10 95 514.8286528334486 1027.642752733697 2 514.8292114138603 MULTI CID FTMS 0 0 0 21029 49740.6171875 0.4555891396485262 -5 0.0962600708007812 1 Unmodified _IMLGAGLIKI_ ENSG00000103227|ENST00000262301|LMF1 50.855029805455786 0.0751325592344988 3 {I|L}P{M(Oxidation (M))|F}{I|L}QG{I|L}K{I|L} 9 4 + 71.213 0.0 0.0 6.9297 6.9297 90.63 0.0 0.0 0.0 36.55476044102754 11.962724883926654 11.962724883926654 9.208187539523747 0 1.0629529932484498 1.3010299956639813 0.0 0.1989700043360188 {I|L}P{M(Oxidation (M))|F}{I|L}QG{I|L}K{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}[AG]G{I|L}K{I|L};{I|L}{I|L}M{I|L}QG{I|L}K{I|L};{I|L}{I|L}M{I|L}[AG]G{I|L}K{I|L} 6.9297;6.0337;5.9859;5.0898 -;-;-;- 784 + 1 2.106 80920.7 0.3899999856948852 15093 5935 21029 HBL1_DMSO_200M_050219_1,21030 HBL1_DMSO_200M_050219_1,21030,IMLGAGLIKI True False IPFLGAGIKI 103.56496 514.82921141386 899489.0 21029.0 ENST00000523351.5_1_5:169188379-169509859:+|nuORF;;ENST00000519868.1_1_5:169502602-169506159:+|nuORF;;ENST00000520450.5_1_5:169484535-169509859:+|nuORF;;ENSG00000134516|ENST00000520908|DOCK2 3.87849489847819 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21031 103.58 800.0 30139.0 25 0 780.53 -1 0 67 1154.589404284954 0 1154.589404284954 PEAK CID FTMS 0 0 0 -1 0 2 3 WE 2 -1 14.464 0.0 0.0 0.62691 0.0 0.0 1284.7455677478397 704.2730196588499 1989.0185874066888 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 WE 0.62691 - 11 + 1 2.106 25456.9 0.5400000214576721 15094 5935 21029 HBL1_DMSO_200M_050219_1,21031 HBL1_DMSO_200M_050219_1,21031, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21032 103.59 554.0 27543.0 25 0 7363.9 -1 0 23 1146.0545968915255 0 1146.059008777142 PEAK CID FTMS 0 0 0 21029 69814.8671875 0.9974879470572424 -1 0.0406265258789062 3 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.106 21737.2 1.0 15095 5935 21029 HBL1_DMSO_200M_050219_1,21032 HBL1_DMSO_200M_050219_1,21032, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21033 103.59 224.0 18115.0 25 0 1767.1 -1 0 14 1108.1468145938063 0 1107.810839831829 PEAK CID FTMS 0 0 0 21029 35701.56640625 0.8485771460399103 -1 0.0406265258789062 4 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.106 15395.8 1.0 15096 5935 21029 HBL1_DMSO_200M_050219_1,21033 HBL1_DMSO_200M_050219_1,21033, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21035 103.6 277.0 290810.0 25 0 82415.0 + 2210 AQAQEVFFL 9 83 526.7742661587031 1051.533979384206 2 526.7740356326103 MULTI CID FTMS 0 0 0 21034 199781.171875 0.4664085404814027 2 -0.0669021606445312 1 Unmodified _AQAQEVFFL_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 41.8396318013385 0.0653578398400075 3 {NN|[MP]|[D{I|L}]|[EV]}QAAQ{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 5 + 55.534 0.0 0.0 5.2813 5.2813 75.977 0.0 0.0 0.0 1.6824376479242176 7.147642715192504 1.6824376479242176 1.6824376479242176 0 0.5 1.2218487496163564 0.6549471895720985 0.6694451763165201 {NN|[MP]|[D{I|L}]|[EV]}QAAQ{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[QA]EVAQ{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}QA{M(Oxidation (M))|F}AQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[QA]EV{M(Oxidation (M))|F}AQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[QA]EAQV{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}[AG]AAQ{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}QAA[AG]{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}QAA{M(Oxidation (M))|F}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[QA]AGAEV{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAAQ{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 5.2813;5.1213;4.8234;4.6634;4.4603;4.4056;4.4056;4.3466;4.3172;4.3134 -;-;-;-;-;-;-;-;-;- 1000 1 2.106 68670.2 1.0 15097 5936 21034 HBL1_DMSO_200M_050219_1,21035 HBL1_DMSO_200M_050219_1,21035,AQAQEVFFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21036 103.61 800.0 100760.0 25 0 9432.9 + -1 GILPMVPEV 9 101 954.592277961591 0 954.8475219607352 PEAK CID FTMS 0 0 0 21034 28090.82421875 0.3170436934534768 10 -0.3663101196289062 2 nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1;ENSG00000124214|ENST00000371856|STAU1 3 {I|L}V{I|L}G{I|L}V 6 -1 13.454 0.0 0.0 0.70542 0.0 0.0 1084.670748694863 225.0712069147094 1309.7419556095724 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V{I|L}G{I|L}V 0.70542 - 368 + 1 2.106 59438.2 0.3799999952316284 15098 5936 21034 HBL1_DMSO_200M_050219_1,21036 HBL1_DMSO_200M_050219_1,21036, False False GILPMVPEV 103.61427 954.847521960735 6945727.0 21034.0 nc|ENSG00000124214|O95793-2|STAU1;;nc|ENSG00000124214|O95793-3|STAU1;;ENSG00000124214|ENST00000371856|STAU1 5.859942595163981 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21038 103.63 800.0 250050.0 25 0 14040.0 -1 0 143 872.4175932028735 3485.641266945094 4 872.6647216677666 MULTI CID FTMS 0 0 0 21037 130458.265625 0.0058773429886997 44 -0.891204833984375 1 3 [YQ]{I|L}E 4 -1 43.328 0.0 0.0 1.243 0.0 0.0 0.0 2949.3678043808936 2949.3678043808936 3.2289185172736268 0.0 0.0 0.0 0 1.3807196863200843 1.3010299956639813 0.0 0.3807196863200844 [YQ]{I|L}E 1.243 - 1103 1 2.106 134228.9 0.4799999892711639 15099 5937 21037 HBL1_DMSO_200M_050219_1,21038 HBL1_DMSO_200M_050219_1,21038, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21039 103.65 800.0 139580.0 25 0 19648.0 + 45155 YQFDKVGILTL 11 108 648.8640380826987 0 648.8639404177666 PEAK CID FTMS 0 0 0 21037 93777.9375 1.0 0 0.0 2 Unmodified _YQFDKVGILTL_ ENSG00000100296|ENST00000490103|THOC5;ENST00000442555.5_1_22:29904448-29924274:-|nuORF 64.69154705217129 0.0045446795512711 3 E{I|L}T{I|L}{I|L}GVVC(Carbamidomethyl (C)) 9 10 51.425 0.0 0.0 3.9688 0.0 0.0 180.0883534097348 128.07198511295158 308.1603385226864 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 E{I|L}T{I|L}{I|L}GVVC(Carbamidomethyl (C)) 3.9688 - 2156 + 1 2.106 92501.0 0.3400000035762787 15100 5937 21037 HBL1_DMSO_200M_050219_1,21039 HBL1_DMSO_200M_050219_1,21039,YQFDKVGILTL True True YQFDKVGILTL 103.64581 648.863940417767 830213.4375 21037.0 ENST00000442555.5_1_22:29904448-29924274:-|nuORF;;ENSG00000100296|ENST00000490103|THOC5 6.951790014902751 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21040 103.66 800.0 178660.0 25 0 11855.0 + 41869 VPYPLPKIDLI 11 114 634.3870250966813 1266.7594972601626 2 634.3869506716728 MULTI CID FTMS 0 0 0 21037 84706.59375 0.4717798276912366 -3 0.107635498046875 3 Unmodified _VPYPLPKIDLI_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1 64.68765255105646 0.0501206113086356 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}VPK{I|L}D{I|L}{I|L} 11 2 + 73.963 0.0 0.0 5.8388 5.8388 75.494 0.0 0.0 0.0 4.829022044314456 16.575773191777927 4.829022044314456 0.2287874528033739 0 1.4802046884880935 1.6989700043360187 0.9247425010840048 0.3494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}VPK{I|L}D{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}PK{I|L}D{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PVPK{I|L}D{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PV{I|L}PK{I|L}D{I|L}{I|L};[VP]YP{I|L}EK{I|L}PV{I|L};[VP]YP{I|L}PK{I|L}D{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}VPK{I|L}EV{I|L};[VP]YP{I|L}EK[VP]{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}PK{I|L}EV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}EQ{I|L}PV{I|L} 5.8388;5.8207;5.7401;5.6223;5.4576;5.3676;5.2175;5.2129;5.1994;5.1807 -;-;-;-;-;+;-;-;-;- + 5185 1 2.106 109133.5 0.3300000131130218 15101 5937 21037 HBL1_DMSO_200M_050219_1,21040 HBL1_DMSO_200M_050219_1,21040,VPYPLPKIDLI True True VPYPLPKIDLI 103.65965 634.386950671673 1920569.625 21037.0 nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;;nc|ENSG00000141279|P55786-2|NPEPPS;;nc|ENSG00000274487|A6NEC2|NPEPPSL1;;ENSG00000141279|ENST00000322157|NPEPPS;;ENST00000602788.5_1_17:45660176-45669919:+|nuORF 4.248851458231608 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21042 103.66 38.0 1560400.0 25 0 247630.0 + 22482 LPVPAFNVI 9 72 485.29237573358944 968.5701985339788 2 485.2921935915947 MULTI CID FTMS 0 0 0 21041 963400.875 0.5687477414340161 -2 0.0669021606445312 1 Unmodified _LPVPAFNVI_ ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000111674|P09104-2|ENO2 42.96799951952854 0.0591636306142405 3 [{I|L}P]VPA{M(Oxidation (M))|F}NV{I|L} 9 0 + 44.72 0.0 0.0 4.6171 4.6171 79.883 0.0 0.0 0.0 7.122665795563414 10.330145895351848 7.122665795563414 6.197887582883929 0 0.7429928190999391 1.0969100130080565 0.0 0.0 + + [{I|L}P]VPA{M(Oxidation (M))|F}NV{I|L};[{I|L}P][PG]{I|L}{M(Oxidation (M))|F}NV{I|L};[PA]{M(Oxidation (M))|F}N{I|L}VPV{I|L};[PA]{M(Oxidation (M))|F}NV{I|L}PV{I|L};[VP]{I|L}PA{M(Oxidation (M))|F}NV{I|L};[{I|L}P][PG]{M(Oxidation (M))|F}{I|L}NV{I|L};[{I|L}P]VPA{M(Oxidation (M))|F}GGV{I|L};[{I|L}P]V{[DS]|[MA]|[CV]|TT}{I|L}NV{I|L};[PA]{M(Oxidation (M))|F}{I|L}NVPV{I|L};[VP][PA]{I|L}{M(Oxidation (M))|F}NV{I|L} 4.6171;3.9772;3.8818;3.8772;3.7954;3.6664;3.6664;3.4846;3.3892;3.1555 +;-;-;-;-;-;-;-;-;- + 512 1 2.106 50393.4 1.0 15102 5938 21041 HBL1_DMSO_200M_050219_1,21042 HBL1_DMSO_200M_050219_1,21042,LPVPAFNVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21043 103.68 800.0 143010.0 25 0 18178.0 + 16928 KILDVLEEI 9 113 536.3188083177184 1070.6230637022368 2 536.3182250857353 MULTI CID FTMS 0 0 0 21041 125012.6953125 1.0 0 0.0 2 Unmodified _KILDVLEEI_ ENSG00000128609|ENST00000355749|NDUFA5;ENST00000492549.5_1_7:123190514-123197849:-|nuORF;ENST00000567995.1_1_16:47632668-47632902:-|nuORF;nc|ENSG00000128609|Q16718-2|NDUFA5 72.96794272382148 0.0199516581995792 3 {[QN]|[E{I|L}]|[KN]}VKV{I|L}EE{I|L} 9 3 + 86.009 0.0 0.0 8.0335 8.0335 90.091 0.0 0.0 0.0 9.165764753333235 16.47817481888636 9.165764753333235 6.262874945799766 0 1.0138793319624575 1.0969100130080565 1.6307196863200843 0.0 {[QN]|[E{I|L}]|[KN]}VKV{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}VVK{I|L}EE{I|L};[K{I|L}]{I|L}DV{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}VEE{I|L};{[QN]|[E{I|L}]|[KN]}VKVE{I|L}E{I|L};[{I|L}V]D{I|L}K{I|L}EE{I|L};[DV]{I|L}{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}VVKE{I|L}E{I|L};[{I|L}V]EKV{I|L}EE{I|L};[K{I|L}]{I|L}D{I|L}VEE{I|L} 8.0335;7.4485;7.1774;7.1197;7.0602;6.6311;6.6281;6.4753;6.3726;6.2636 -;-;+;-;-;-;-;-;-;- + 2709 1 2.106 92686.8 0.4199999868869781 15103 5938 21041 HBL1_DMSO_200M_050219_1,21043 HBL1_DMSO_200M_050219_1,21043,KILDVLEEI True True KILDVLEEI 103.67875 536.318225085735 896647.9375 21041.0 nc|ENSG00000128609|Q16718-2|NDUFA5;;ENSG00000128609|ENST00000355749|NDUFA5;;ENST00000492549.5_1_7:123190514-123197849:-|nuORF;;ENST00000567995.1_1_16:47632668-47632902:-|nuORF 2.037760376930237 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21044 103.69 800.0 204190.0 25 0 9698.0 + -1 QILEDMITI 9 109 1075.571041143478 0 1075.568164050579 PEAK CID FTMS 0 0 0 21041 119658.2578125 0.5123417565909039 -2 0.0669021606445312 3 nc|ENSG00000030066|Q12769|NUP160;nc|ENSG00000030066|Q12769-3|NUP160;ENSG00000030066|ENST00000378460|NUP160 3 M{I|L}TQ{I|L}MD 7 -1 52.953 0.0 0.0 2.464 0.0 0.0 1074.6112470748726 239.1042574518188 1313.7155045266911 0.0 0.0 0.0 0.0 0 0.0 0.0 1.295114016114533 1.0941876774005248 M{I|L}TQ{I|L}MD 2.464 - 4967 + 1 2.106 110340.9 0.4600000083446502 15104 5938 21041 HBL1_DMSO_200M_050219_1,21044 HBL1_DMSO_200M_050219_1,21044, False False QILEDMITI 103.69261 1075.56816405058 2317051.75 21041.0 nc|ENSG00000030066|Q12769|NUP160;;nc|ENSG00000030066|Q12769-3|NUP160;;ENSG00000030066|ENST00000378460|NUP160 2.732983350753784 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21045 103.71 800.0 97751.0 25 0 7324.2 + -1 YFCYVEMYMLC 11 150 805.808757445773 0 806.0436279177666 PEAK CID FTMS 0 0 0 21041 9797.1298828125 0.584718983743813 -1 0.0453948974609375 4 2 Carbamidomethyl (C),2 Oxidation (M) _YFC(Carbamidomethyl (C))YVEM(Oxidation (M))YM(Oxidation (M))LC(Carbamidomethyl (C))_ REV__ENST00000461788.1_1_2:32740825-32744123:+|nuORF 0.3506318815782774 0.47618401536486 3 A 1 -1 5.4846 0.0 0.0 0.34074 0.0 0.0 1403.4965451876412 132.04612146549064 1535.5426666531318 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.34074 - 105 + 1 2.106 55713.5 0.3700000047683716 15105 5938 21041 HBL1_DMSO_200M_050219_1,21045 HBL1_DMSO_200M_050219_1,21045,YFCYVEMYMLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21046 103.72 800.0 116920.0 25 0 19528.0 + 45008 YPSYPALII 9 81 1036.5706739642271 1035.5633974976272 1 1036.567431628704 MULTI CID FTMS 0 0 0 21041 91434.78125 0.5319840367316263 26 -0.6587371826171875 5 Unmodified _YPSYPALII_ ENSG00000096070|ENST00000357641|BRPF3;ENSG00000100425|ENST00000404760|BRD1;ENSG00000156983|ENST00000383829|BRPF1;ENST00000479985.1_1_22:50169237-50169760:-|nuORF;nc|ENSG00000096070|Q9ULD4-2|BRPF3;nc|ENSG00000096070|Q9ULD4-3|BRPF3;nc|ENSG00000100425|O95696|BRD1;nc|ENSG00000156983|P55201-3|BRPF1;nc|ENSG00000156983|P55201-4|BRPF1;nc|ENSG00000156983|P55201|BRPF1 89.42679046578446 0.015225546354407 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SY[PA]{I|L}{I|L}{I|L} 9 0 + 53.711 0.0 0.0 5.1866 5.1866 86.795 0.0 0.0 0.0 21.772810801416043 22.52197890818877 21.772810801416043 13.066884185923657 0 0.8494850021680094 1.154901959985743 1.579689690656103 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SY[PA]{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[PA]Y{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[PA]{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}A][PS]Y{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[MT][VS]{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}A]{M(Oxidation (M))|F}QGQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}A]{M(Oxidation (M))|F}QGK{I|L};{I|L}{I|L}[C(Carbamidomethyl (C))N]Y{I|L}K{I|L};{I|L}{I|L}[C(Carbamidomethyl (C))N]YK{I|L}{I|L} 5.1866;3.9248;3.851;2.9622;2.8915;2.8846;2.7135;2.7135;2.5962;2.5728 +;-;-;-;-;-;-;-;-;- + 542 1 2.106 64632.1 0.4199999868869781 15106 5938 21041 HBL1_DMSO_200M_050219_1,21046 HBL1_DMSO_200M_050219_1,21046,YPSYPALII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21047 103.73 692.0 217160.0 25 0 9913.8 40160 VGPARRLS 8 183 855.5177111673738 854.5104347007738 1 857.9766723513603 MULTI CID FTMS 0 0 0 -1 0 6 Unmodified _VGPARRLS_ ENST00000288014.6_1_14:24025414-24025621:+|nuORF 2.577480529830294 0.808687252328423 3 {[CP]|[EA]}{I|L}{I|L} 4 6 13.812 0.0 0.0 1.6164 0.0 0.0 0.0 425.2222384088501 425.2222384088501 5.207543504999896 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[CP]|[EA]}{I|L}{I|L} 1.6164 - 535 + 1 2.106 96458.5 1.0 15107 5938 21041 HBL1_DMSO_200M_050219_1,21047 HBL1_DMSO_200M_050219_1,21047,VGPARRLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21049 103.75 655.0 89268.0 25 0 1081.9 -1 0 114 1129.685229480267 0 1129.685229480267 PEAK CID FTMS 0 0 0 -1 0 1 3 T 1 -1 4.6041 0.0 0.0 0.20396 0.0 0.0 1931.155540892372 222.1252840631469 2153.2808249555187 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.20396 - 13 + 1 2.106 41919.6 1.0 15108 5939 21048 HBL1_DMSO_200M_050219_1,21049 HBL1_DMSO_200M_050219_1,21049, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21050 103.76 800.0 227850.0 25 0 41647.0 + 31121 RLLSFVVLA 9 87 509.3264800908061 1016.6384072484122 2 509.3265258669853 MULTI CID FTMS 0 0 0 21048 120363.78125 0.3701144684715625 -1 0.0727157592773437 2 Unmodified _RLLSFVVLA_ ENSG00000163479|ENST00000295702|SSR2;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENST00000472898.5_1_1:155981561-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000532074.5_1_1:155984857-155990687:-|nuORF 39.94969957227396 0.0757326808254658 3 V{[RE]|[WV]}{M(Oxidation (M))|F}VV{I|L}A 8 4 58.493 0.0 0.0 5.7535 0.0 0.0 85.08989150215 0.0 85.08989150215 0.0 42.29486901908295 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.7302046884880937 V{[RE]|[WV]}{M(Oxidation (M))|F}VV{I|L}A 5.7535 - 71 1 2.106 141578.8 0.4099999964237213 15109 5939 21048 HBL1_DMSO_200M_050219_1,21050 HBL1_DMSO_200M_050219_1,21050,RLLSFVVLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21051 103.78 800.0 398020.0 25 0 60665.0 + 16211 IVLDRLIEL 9 112 542.3423935716676 1082.670234210135 2 542.3427001833916 MULTI CID FTMS 0 0 0 21048 103619.8046875 0.1199839421159179 -4 0.18511962890625 3 Unmodified _IVLDRLIEL_ ENSG00000129083|ENST00000439561|COPB1 74.19965305603844 0.0194755241623067 3 {I|L}V{I|L}D 4 5 68.175 0.0 0.0 6.297 0.0 0.0 0.0 639.3838077905293 639.3838077905293 6.164666824244655 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.1989700043360187 0.0 + {I|L}V{I|L}D 6.297 + + 2070 + 1 2.106 241267.3 0.9700000286102296 15110 5939 21048 HBL1_DMSO_200M_050219_1,21051 HBL1_DMSO_200M_050219_1,21051,IVLDRLIEL True True IVLDRLIEL 103.77533 542.342700183392 7565367.5 21048.0 ENSG00000129083|ENST00000439561|COPB1 3.296984434127808 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21052 103.79 800.0 148390.0 25 0 19486.0 + 18106 KTLDWEIVEL 10 98 623.3400215556692 1244.6654901781385 2 623.3394042849541 MULTI CID FTMS 0 0 0 21048 83202.65625 0.3194718180172681 -4 0.18511962890625 4 Unmodified _KTLDWEIVEL_ ENSG00000137221|ENST00000372449|TJAP1;nc|ENSG00000137221|Q5JTD0-2|TJAP1;nc|ENSG00000137221|Q5JTD0-4|TJAP1 75.5705956163825 0.0187571863157879 3 {[QN]|[E{I|L}]|[KN]}SKWE{I|L}VE{I|L} 10 3 + 101.65 0.0 0.0 8.1667 8.1667 86.759 0.0 0.0 0.0 3.067088285145431 16.53212513775344 3.067088285145431 3.067088285145431 0 1.1549471895720984 1.0 2.293157681736544 0.0 {[QN]|[E{I|L}]|[KN]}SKWE{I|L}VE{I|L};[{I|L}T]KDWE{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}TKWE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}SK{[DA]|[EG]}E{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}WSKE{I|L}VE{I|L};[{I|L}T]DKWE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}SWKE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}WDTK{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}SKWEV{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}TKWNKVE{I|L} 8.1667;7.9203;7.8711;7.4304;7.3771;7.3551;7.2992;7.2848;7.0609;7.0461 -;-;-;-;-;-;-;-;-;- 7889 1 2.106 91312.1 0.3100000023841858 15111 5939 21048 HBL1_DMSO_200M_050219_1,21052 HBL1_DMSO_200M_050219_1,21052,KTLDWEIVEL True True KTLDWEIVEL 103.78917 623.339404284954 5221063.0 21048.0 ENSG00000137221|ENST00000372449|TJAP1;;nc|ENSG00000137221|Q5JTD0-2|TJAP1;;nc|ENSG00000137221|Q5JTD0-4|TJAP1 6.3461653391520185 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21054 103.79 166.0 404140.0 25 0 62151.0 + 27099 PFHSILSVL 9 92 506.7953550589975 1011.576157184795 2 506.7950927615166 MULTI CID FTMS 0 0 0 21053 612547.375 1.0 0 0.0 1 Unmodified _PFHSILSVL_ ENSG00000163382|ENST00000368235|NAXE;nc|ENSG00000163382|Q8NCW5-2|NAXE 44.40701690623563 0.0526327925666318 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}S{I|L}{I|L}SV{I|L} 9 2 + 45.376 0.0 0.0 4.4856 4.4856 72.991 0.0 0.0 0.0 1.3962929938665525 7.623541449959021 1.3962929938665525 1.3962929938665525 0 0.7429928190999391 0.0 1.4634679910804405 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}S{I|L}{I|L}SV{I|L};[{I|L}V][HT]P{M(Oxidation (M))|F}SV{I|L};[{I|L}V][HT]M{I|L}SV{I|L};[{I|L}V][HT]SP{M(Oxidation (M))|F}V{I|L};[{I|L}V][HT]SM{I|L}V{I|L};[HS]{I|L}P{I|L}{M(Oxidation (M))|F}SV{I|L};[HS]P{I|L}{M(Oxidation (M))|F}{I|L}SV{I|L};[HS]P{I|L}{I|L}{M(Oxidation (M))|F}SV{I|L};[HS]{I|L}P{M(Oxidation (M))|F}{I|L}SV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}S{I|L}S{I|L}V{I|L} 4.4856;4.3476;4.3476;4.2418;4.1074;4.0797;4.0797;4.0797;4.0797;4.0487 -;-;-;-;-;-;-;-;-;- 1422 1 2.106 55879.5 1.0 15112 5940 21053 HBL1_DMSO_200M_050219_1,21054 HBL1_DMSO_200M_050219_1,21054,PFHSILSVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21055 103.8 195.0 227600.0 25 0 6415.1 -1 0 95 1159.20677502477 3474.59849567451 3 1159.543994128704 MULTI CID FTMS 0 0 0 21053 195855.53125 0.3237972253378433 6 -0.1705322265625 2 3 C 1 -1 6.9897 0.0 0.0 0.20117 0.0 0.0 2131.0477887426728 1237.5244845026002 3368.572273245273 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.20117 - 21 + 1 2.106 30074.7 1.0 15113 5940 21053 HBL1_DMSO_200M_050219_1,21055 HBL1_DMSO_200M_050219_1,21055, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21056 103.8 376.0 30203.0 25 0 4782.6 -1 0 29 891.068352647463 0 890.6640502810478 PEAK CID FTMS 0 0 0 21053 55678.6171875 1.0 0 0.0 3 3 A 1 -1 6.9897 0.0 0.0 0.39265 0.0 0.0 786.274692500201 919.7658785455686 1706.0405710457696 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.39265 - 1 + 1 2.106 15560.6 1.0 15114 5940 21053 HBL1_DMSO_200M_050219_1,21056 HBL1_DMSO_200M_050219_1,21056, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21057 103.81 214.0 23628.0 25 0 1949.6 -1 0 18 1027.1933646105292 0 1027.192553699017 PEAK CID FTMS 0 0 0 21053 201990.109375 1.0 0 0.0 4 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.106 16517.1 1.0 15115 5940 21053 HBL1_DMSO_200M_050219_1,21057 HBL1_DMSO_200M_050219_1,21057, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21058 103.82 702.0 44486.0 25 0 3211.2 -1 AGCCYFCYYYF 11 84 730.2623779177666 0 730.2623779177666 PEAK CID FTMS 0 0 0 -1 0 5 Carbamidomethyl (C) _AGC(Carbamidomethyl (C))CYFCYYYF_ ENSG00000204520|ENST00000449934|MICA 1.4819007175156935 0.4761840153648598 3 A 1 -1 6.9897 0.0 0.0 0.47924 0.0 0.0 1252.4040302722533 132.04604517154533 1384.4500754437986 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.47924 + + 58 + 1 2.106 31549.9 1.0 15116 5940 21053 HBL1_DMSO_200M_050219_1,21058 HBL1_DMSO_200M_050219_1,21058,AGCCYFCYYYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21059 103.83 625.0 153970.0 25 0 34813.0 + 37854 TLVDEVFRI 9 65 546.3083267538891 1090.602100574578 2 546.3083984255791 MULTI CID FTMS 0 0 0 21053 225614.84375 1.0 0 0.0 6 Unmodified _TLVDEVFRI_ ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2 47.74868867922204 0.0453060283459952 3 [{I|L}T]VD{I|L}D{M(Oxidation (M))|F}R{I|L} 9 2 + 77.089 0.0 0.0 7.0684 7.0684 79.683 0.0 0.0 0.0 27.147642715192504 8.750612633917001 8.750612633917001 0.4845500650402812 0 0.4247425010840047 2.0 0.6989700043360187 0.4247425010840047 [{I|L}T]VD{I|L}D{M(Oxidation (M))|F}R{I|L};[{I|L}T]VDEV{M(Oxidation (M))|F}R{I|L};[{I|L}T]{I|L}VDD{M(Oxidation (M))|F}R{I|L};[{I|L}T]V{I|L}DD{M(Oxidation (M))|F}R{I|L};[{I|L}T]VD{I|L}D{I|L}[R{M(Oxidation (M))|F}];[{I|L}T]VDEV{I|L}[R{M(Oxidation (M))|F}];[{I|L}T]{I|L}VDD{I|L}[R{M(Oxidation (M))|F}];[{I|L}T]V{I|L}DD{I|L}[R{M(Oxidation (M))|F}];[{I|L}T]{I|L}DDV{M(Oxidation (M))|F}R{I|L};[{I|L}T]{I|L}DDV{I|L}[R{M(Oxidation (M))|F}] 7.0684;7.024;6.545;6.472;6.2661;6.2216;5.7427;5.6696;5.3334;4.531 -;+;-;-;-;-;-;-;-;- + 174 + 1 2.106 80830.0 1.0 15117 5940 21053 HBL1_DMSO_200M_050219_1,21059 HBL1_DMSO_200M_050219_1,21059,TLVDEVFRI True True TLVDEVFRI 103.8321 546.308398425579 3274341.75 21053.0 nc|ENSG00000117748|P15927-2|RPA2;;nc|ENSG00000117748|P15927-3|RPA2;;ENSG00000117748|ENST00000373912|RPA2 4.957070271174113 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21060 103.85 800.0 78175.0 25 0 1076.9 -1 0 117 1104.3557116367665 0 1104.482836902142 PEAK CID FTMS 0 0 0 -1 0 7 3 G 1 -1 5.4846 0.0 0.0 0.24854 0.0 0.0 1924.5633081838864 222.08931909732652 2146.652627281213 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.24854 - 44 + 1 2.106 46633.0 0.8500000238418579 15118 5940 21053 HBL1_DMSO_200M_050219_1,21060 HBL1_DMSO_200M_050219_1,21060, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21061 103.86 692.0 45649.0 25 0 8449.7 + 2335 AQLDETVEALL 11 69 601.3191838421002 1200.6238147510005 2 601.3197509646416 MULTI CID FTMS 0 0 0 21053 182385.984375 1.0 0 0.0 8 Unmodified _AQLDETVEALL_ ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40 51.41523569358685 0.1097924807909074 3 [{I|L}A]QD{[ET]|[MV]}VEA{I|L}{I|L} 11 2 + 69.367 0.0 0.0 5.7776 5.7776 79.407 0.0 0.0 0.0 2.7685763285770832 10.109860684774326 2.7685763285770832 2.7685763285770832 0 0.6989700043360187 0.958607314841775 1.274227503252014 0.3807196863200844 [{I|L}A]QD{[ET]|[MV]}VEA{I|L}{I|L};[QA]{I|L}D{[ET]|[MV]}VEA{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QA{[ET]|[MV]}VEA{I|L}{I|L};[{I|L}A][AG]D{[ET]|[MV]}VEA{I|L}{I|L};{[CP]|[EA]}RA{[ET]|[MV]}VEA{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]A{[ET]|[MV]}VEA{I|L}{I|L};[{I|L}A][DG]A{[ET]|[MV]}VEA{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}NA{[ET]|[MV]}VEA{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QA[DP]V{M(Oxidation (M))|F}A{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GGA{[ET]|[MV]}VEA{I|L}{I|L} 5.7776;5.547;5.0832;4.7001;4.4457;4.3229;4.3028;4.2503;3.5571;3.49 -;+;-;-;-;-;-;-;-;- + 375 1 2.106 28105.3 1.0 15119 5940 21053 HBL1_DMSO_200M_050219_1,21061 HBL1_DMSO_200M_050219_1,21061,AQLDETVEALL True True AQLDETVEALL 103.85799 601.319750964642 780249.4375 21053.0 ENST00000493683.5_1_16:30773821-30780773:+|nuORF;;ENSG00000103549|ENST00000324685|RNF40;;nc|ENSG00000103549|O75150-4|RNF40;;nc|ENSG00000103549|O75150-3|RNF40 6.955983479817708 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21063 103.88 800.0 17412.0 25 0 2851.8 17012 KKDFEKWKTKF 11 33 742.9147216677666 0 742.9147216677666 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _KKDFEKWKTKF_ ENSG00000183091|ENST00000397345|NEB;ENSG00000183091|ENST00000397345|NEB;ENSG00000183091|ENST00000397345|NEB;ENSG00000183091|ENST00000397345|NEB;ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-4|NEB 0.2690200627634905 0.4761840153648598 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.18 18235.8 0.6200000047683716 15120 5941 21062 HBL1_DMSO_200M_050219_1,21063 HBL1_DMSO_200M_050219_1,21063,KKDFEKWKTKF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21064 103.89 800.0 49485.0 25 0 3499.6 -1 0 81 1079.896777331829 0 1079.896777331829 PEAK CID FTMS 0 0 0 -1 0 2 3 G 1 -1 6.9897 0.0 0.0 0.32393 0.0 0.0 1688.4890369861207 409.24640833072505 2097.735445316846 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.32393 - 9 + 1 2.18 32906.3 0.5899999737739563 15121 5941 21062 HBL1_DMSO_200M_050219_1,21064 HBL1_DMSO_200M_050219_1,21064, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21068 103.91 800.0 105190.0 25 0 19296.0 -1 0 67 643.4388694385422 642.4315929719421 1 643.4385253787041 MULTI CID FTMS 0 0 0 21067 44997.5625 0.3998895245347595 -6 0.2377395629882812 1 3 {I|L}{I|L}TA{I|L}{I|L} 6 -1 + 56.52 0.0 0.0 8.7979 8.7979 90.522 0.0 0.0 0.0 10.10090614668492 14.69273760456403 10.10090614668492 5.6246936830415 0 0.3494850021680094 1.5228787452803376 1.1421590589602533 0.0 {I|L}{I|L}TA{I|L}{I|L};{I|L}{I|L}AT{I|L}{I|L};{I|L}{I|L}T{I|L}A{I|L};[TA]{I|L}{I|L}{I|L}{I|L};[{I|L}T]A{I|L}{I|L}{I|L};{I|L}{I|L}{I|L}TA{I|L};{I|L}{I|L}{I|L}AT{I|L};[{I|L}T]{I|L}A{I|L}{I|L};{I|L}{I|L}A{I|L}T{I|L};[{I|L}T]{I|L}{I|L}A{I|L} 8.7979;7.9224;7.2304;7.2256;7.0747;6.6726;5.8922;5.808;5.5745;4.2405 -;-;-;-;-;-;-;-;-;- 120 1 2.18 68907.0 0.4099999964237213 15122 5944 21067 HBL1_DMSO_200M_050219_1,21068 HBL1_DMSO_200M_050219_1,21068, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21069 103.93 800.0 339160.0 25 0 16391.0 + 36202 SVVTSIFGV 9 169 908.5081650987236 907.5008886321236 1 908.5089599490166 MULTI CID FTMS 0 0 0 21067 159497.625 0.2248561960655395 -6 0.2377395629882812 2 Unmodified _SVVTSIFGV_ ENSG00000196305|ENST00000443024|IARS1 96.28474662873226 0.0124266067997264 3 [VS]VTS{I|L}{M(Oxidation (M))|F}GV 9 0 + 77.374 0.0 0.0 8.5261 8.5261 94.572 0.0 0.0 0.0 9.295383301770883 9.946049681132934 9.295383301770883 9.295383301770883 0 1.360924374808178 0.9208187539523752 2.726644578709441 0.0 + + [VS]VTS{I|L}{M(Oxidation (M))|F}GV;[{I|L}T]ATS{I|L}{M(Oxidation (M))|F}GV;[VS]VT{M(Oxidation (M))|F}TVGV;{[TV]|[{I|L}S]}[VS]S{I|L}{M(Oxidation (M))|F}GV;[{I|L}T]AT{M(Oxidation (M))|F}TVGV;[VS]V{M(Oxidation (M))|F}TTVGV;{[TV]|[{I|L}S]}TTA{I|L}{M(Oxidation (M))|F}GV;[VS]VYVSVGV;{[TV]|[{I|L}S]}TV[VS]{M(Oxidation (M))|F}GV;{[TV]|[{I|L}S]}[VS]{M(Oxidation (M))|F}TVGV 8.5261;7.5018;7.2539;6.3508;6.2296;5.6335;5.5129;5.1097;5.0955;5.0786 +;-;-;-;-;-;-;-;-;- + 8089 1 2.18 175529.4 0.6200000047683716 15123 5944 21067 HBL1_DMSO_200M_050219_1,21069 HBL1_DMSO_200M_050219_1,21069,SVVTSIFGV True True SVVTSIFGV 103.92762 908.508959949017 5695991.5 21067.0 ENSG00000196305|ENST00000443024|IARS1 7.854732195536296 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21070 103.93 308.0 282430.0 25 0 19841.0 + 35632 SVAPALALFPA 11 93 1056.6077448032904 1055.6004683366905 1 1056.600390613079 MULTI CID FTMS 0 0 0 21067 137594.859375 0.8152195617790454 1 -0.0452880859375 3 Unmodified _SVAPALALFPA_ ENST00000367627.7_1_1:179051238-179051328:+|nuORF 74.92900055777586 0.0181202892152222 3 W{M(Oxidation (M))|F}{I|L}SG{I|L}A{I|L} 8 8 63.085 0.0 0.0 5.9762 0.0 0.0 0.0 165.06789575748283 165.06789575748283 30.73358710734276 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.424742501084005 0.0 W{M(Oxidation (M))|F}{I|L}SG{I|L}A{I|L} 5.9762 - 3365 + 1 2.18 64068.8 1.0 15124 5944 21067 HBL1_DMSO_200M_050219_1,21070 HBL1_DMSO_200M_050219_1,21070,SVAPALALFPA True False SVAPALALFPA 103.93328 1056.60039061308 2307785.5 21067.0 ENST00000367627.7_1_1:179051238-179051328:+|nuORF 5.4844668706258135 1.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21071 103.94 534.0 32292.0 25 0 1226.8 -1 0 51 1068.5331785576109 0 1068.434130847454 PEAK CID FTMS 0 0 0 -1 0 4 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.18 20972.0 1.0 15125 5944 21067 HBL1_DMSO_200M_050219_1,21071 HBL1_DMSO_200M_050219_1,21071, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21073 103.96 721.0 299560.0 25 0 45056.0 + 22483 LPVPAFNVI 9 124 485.29237573358944 968.5701985339788 2 485.2921630740166 MULTI CID FTMS 0 0 0 21072 118298.2109375 0.0698378442788812 5 -0.112091064453125 1 Unmodified _LPVPAFNVI_ ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000111674|P09104-2|ENO2 59.79521254764295 0.0261954583213598 3 [PA]{M(Oxidation (M))|F}NVP{I|L}V{I|L} 9 6 + 71.894 0.0 0.0 7.4227 7.4227 82.232 0.0 0.0 0.0 5.865743447727638 16.478174818886373 5.865743447727638 1.363781092484686 0 0.4247425010840047 1.0457574905606752 0.0 1.336696871556164 [PA]{M(Oxidation (M))|F}NVP{I|L}V{I|L};[PA]{M(Oxidation (M))|F}N{I|L}PVV{I|L};[PA]{M(Oxidation (M))|F}NV{I|L}PV{I|L};[{I|L}P]A{M(Oxidation (M))|F}NPVV{I|L};[{I|L}V]CNVP{I|L}V{I|L};[{I|L}P]GP{I|L}{M(Oxidation (M))|F}NV{I|L};[PA]{M(Oxidation (M))|F}N{I|L}VPV{I|L};[{I|L}V]CN{I|L}PVV{I|L};[{I|L}P]VPA{M(Oxidation (M))|F}NV{I|L};[PA]{M(Oxidation (M))|F}{I|L}NPVV{I|L} 7.4227;7.2819;7.0178;6.8171;6.8138;6.7757;6.7202;6.673;6.663;6.4535 -;-;-;-;-;-;-;-;+;- + 4690 1 2.18 169154.9 1.0 15126 5945 21072 HBL1_DMSO_200M_050219_1,21073 HBL1_DMSO_200M_050219_1,21073,LPVPAFNVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21076 103.97 263.0 601200.0 25 0 70319.0 + 41842 VPYIGIVTI 9 110 974.5918560127748 973.5845795461748 1 974.5919677615166 MULTI CID FTMS 0 0 0 21075 274444.375 0.0079892692991749 40 -0.5699005126953125 1 Unmodified _VPYIGIVTI_ ENSG00000140612|ENST00000268220|SEC11A;ENST00000558924.1_1_15:85213252-85214072:-|nuORF;ENST00000560266.5_1_15:85213252-85223982:-|nuORF;ENST00000560409.5_1_15:85213252-85222467:-|nuORF;nc|ENSG00000140612|P67812-2|SEC11A 81.86404211737425 0.017065112157077 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VAVVT{I|L} 9 4 + 84.416 0.0 0.0 8.6707 8.6707 87.021 0.0 0.0 0.0 3.899407582191984 14.973024840566469 3.899407582191984 3.0102999566398125 0 0.5796896906561032 1.3010299956639813 1.0994850021680094 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VAVVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VG{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}AVVT{I|L};[VP]Y{I|L}AVVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{I|L}VVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}G{I|L}VT{I|L};[VP]Y{I|L}G{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VAVTV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GV{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA{I|L}VVT{I|L} 8.6707;8.3615;8.3615;8.2701;8.1806;8.0523;7.961;7.8728;7.8714;7.8714 -;-;-;-;-;-;+;-;-;- + 2656 1 2.18 109642.1 1.0 15127 5947 21075 HBL1_DMSO_200M_050219_1,21076 HBL1_DMSO_200M_050219_1,21076,VPYIGIVTI True True VPYIGIVTI 103.97042 974.591967761517 239199872.0 21075.0 ENSG00000140612|ENST00000268220|SEC11A;;ENST00000558924.1_1_15:85213252-85214072:-|nuORF;;ENST00000560409.5_1_15:85213252-85222467:-|nuORF;;ENST00000560266.5_1_15:85213252-85223982:-|nuORF;;nc|ENSG00000140612|P67812-2|SEC11A 7.07007376352946 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21077 103.98 800.0 188110.0 25 0 21402.0 + 9621 FLLGPRLVLA 10 76 549.8552580497761 1097.6959631663522 2 549.8556396365166 MULTI CID FTMS 0 0 0 21075 99468.359375 0.7498035968570785 -3 0.065582275390625 2 Unmodified _FLLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 56.17704186161178 0.0466144807663799 3 {I|L}{I|L}V{I|L}{M(Oxidation (M))|F}{I|L}A 7 5 50.693 0.0 0.0 4.6182 0.0 0.0 310.1764088361344 0.0 310.1764088361344 0.0 10.700622910097335 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 {I|L}{I|L}V{I|L}{M(Oxidation (M))|F}{I|L}A 4.6182 - 189 1 2.18 119527.9 0.3899999856948852 15128 5947 21075 HBL1_DMSO_200M_050219_1,21077 HBL1_DMSO_200M_050219_1,21077,FLLGPRLVLA True True FLLGPRLVLA 103.98425 549.855639636517 1225098.5 21075.0 ENSG00000170348|ENST00000303575|TMED10 5.952816327412923 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21079 104.0 800.0 103530.0 25 0 3225.6 + 16131 ITTILDSPV 9 130 958.5455787257874 957.5383022591874 1 959.1078369021416 MULTI CID FTMS 0 0 0 21078 20422.17578125 0.2723552831718692 -1 0.0212631225585937 1 Unmodified _ITTILDSPV_ REV__ENSG00000197444|ENST00000374103|OGDHL;REV__nc|ENSG00000197444|Q9ULD0-2|OGDHL 39.957323273325 0.0756908302845263 3 [{I|L}T]T{I|L} 4 -1 39.425 0.0 0.0 4.1173 0.0 0.0 0.0 526.251076267253 526.251076267253 20.86632415286392 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 [{I|L}T]T{I|L} 4.1173 + + 516 1 2.18 57022.0 0.9399999976158142 15129 5948 21078 HBL1_DMSO_200M_050219_1,21079 HBL1_DMSO_200M_050219_1,21079,ITTILDSPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21080 104.01 523.0 248700.0 25 0 22027.0 + 8894 FAFQAEIAQL 10 117 569.3007317942594 1136.586910655319 2 569.3004638552666 MULTI CID FTMS 0 0 0 21078 128623.3203125 0.5060949207190601 -3 0.0415573120117187 2 Unmodified _FAFQAEIAQL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P 85.27202061508552 0.012747187882667 3 [QA]{M(Oxidation (M))|F}EA{M(Oxidation (M))|F}{I|L} 7 5 56.035 0.0 0.0 4.9301 0.0 0.0 0.0 327.1664227343858 327.1664227343858 10.61712754646603 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.9163865622122672 1.642159058960253 [QA]{M(Oxidation (M))|F}EA{M(Oxidation (M))|F}{I|L} 4.9301 - 5545 1 2.18 102105.0 1.0 15130 5948 21078 HBL1_DMSO_200M_050219_1,21080 HBL1_DMSO_200M_050219_1,21080,FAFQAEIAQL True True FAFQAEIAQL 104.00987 569.300463855267 4217158.5 21078.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENSG00000080824|ENST00000216281|HSP90AA1;;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;;nc|ENSG00000183199|Q58FF7|HSP90AB3P;;nc|ENSG00000205940|Q58FF8|HSP90AB2P 3.632623672485352 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21081 104.02 437.0 26309.0 25 0 1191.3 -1 0 34 1127.508837878704 0 1127.508837878704 PEAK CID FTMS 0 0 0 -1 0 3 3 E 1 -1 6.9897 0.0 0.0 0.31024 0.0 0.0 1811.342369505652 309.59430872135005 2120.936678227002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.31024 - 1 + 1 2.18 19445.1 1.0 15131 5948 21078 HBL1_DMSO_200M_050219_1,21081 HBL1_DMSO_200M_050219_1,21081, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21082 104.02 351.0 71264.0 25 0 4667.6 -1 0 73 926.1480696232338 0 926.2399169802666 PEAK CID FTMS 0 0 0 -1 0 4 3 K 1 -1 0.48455 0.0 0.0 0.026188 0.0 0.0 1101.258467272055 617.9195040338499 1719.177971305905 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.026188 - 1 + 1 2.18 24202.0 1.0 15132 5948 21078 HBL1_DMSO_200M_050219_1,21082 HBL1_DMSO_200M_050219_1,21082, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21084 104.03 273.0 236590.0 25 0 33924.0 + 18107 KTLDWEIVEL 10 70 623.3400215556692 1244.6654901781385 2 623.3398925662041 MULTI CID FTMS 0 0 0 21083 235897.703125 0.9057723813167508 6 -0.1633224487304687 1 Unmodified _KTLDWEIVEL_ ENSG00000137221|ENST00000372449|TJAP1;nc|ENSG00000137221|Q5JTD0-2|TJAP1;nc|ENSG00000137221|Q5JTD0-4|TJAP1 63.22749603027936 0.0281198777558511 3 {[QN]|[E{I|L}]|[KN]}WDTK{I|L}VE{I|L} 10 4 + 87.266 0.0 0.0 7.0112 7.0112 81.733 0.0 0.0 0.0 7.792107062740811 16.53212513775344 7.792107062740811 1.7609125905568137 0 0.7302046884880937 0.9208187539523752 1.5629529932484498 0.0 {[QN]|[E{I|L}]|[KN]}WDTK{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}WSKE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}WSEK{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}V{[CA]|SS}KE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}[KS]WE{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[CA]|SS}KE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}V{[CA]|SS}EK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KT]WE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}WDT{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[CA]|SS}EK{I|L}VE{I|L} 7.0112;6.8697;6.6278;6.6171;6.5361;6.3851;6.3752;6.3042;6.2866;6.1433 -;-;-;-;-;-;-;-;-;- 1711 1 2.18 55711.8 1.0 15133 5949 21083 HBL1_DMSO_200M_050219_1,21084 HBL1_DMSO_200M_050219_1,21084,KTLDWEIVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21085 104.04 277.0 175280.0 25 0 27308.0 + 16212 IVLDRLIEL 9 54 542.3423935716676 1082.670234210135 2 542.3425170779228 MULTI CID FTMS 0 0 0 21083 196475.703125 0.2275040901884472 6 -0.1633224487304687 2 Unmodified _IVLDRLIEL_ ENSG00000129083|ENST00000439561|COPB1 49.52724829834842 0.0414064571532091 3 {I|L}V{I|L}D 4 5 64.68 0.0 0.0 5.9742 0.0 0.0 0.0 639.3853243463499 639.3853243463499 29.498555472855728 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8494850021680094 0.0 + {I|L}V{I|L}D 5.9742 + + 49 + 1 2.18 42136.4 1.0 15134 5949 21083 HBL1_DMSO_200M_050219_1,21085 HBL1_DMSO_200M_050219_1,21085,IVLDRLIEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21086 104.05 536.0 194170.0 25 0 34906.0 + 31122 RLLSFVVLA 9 58 509.3264800908061 1016.6384072484122 2 509.3265563845634 MULTI CID FTMS 0 0 0 21083 129718.59375 0.3988801936766987 9 -0.2244110107421875 3 Unmodified _RLLSFVVLA_ ENSG00000163479|ENST00000295702|SSR2;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENST00000472898.5_1_1:155981561-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000532074.5_1_1:155984857-155990687:-|nuORF 26.268140514670165 0.1969607489560049 3 V{[RE]|[WV]}{M(Oxidation (M))|F}VV{I|L}A 8 4 48.722 0.0 0.0 4.7924 0.0 0.0 85.08994490791171 0.0 85.08994490791171 0.0 32.523656471886326 0.0 0.0 0 0.7302046884880938 0.0 0.4247425010840047 0.3807196863200844 V{[RE]|[WV]}{M(Oxidation (M))|F}VV{I|L}A 4.7924 - 52 1 2.18 83222.0 1.0 15135 5949 21083 HBL1_DMSO_200M_050219_1,21086 HBL1_DMSO_200M_050219_1,21086,RLLSFVVLA False True RLLSFVVLA 104.04616 509.326556384563 4166225.5 21083.0 ENSG00000163479|ENST00000295702|SSR2;;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;;ENST00000532074.5_1_1:155984857-155990687:-|nuORF;;ENST00000472898.5_1_1:155981561-155990687:-|nuORF 4.835047086079915 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21087 104.06 516.0 192050.0 25 0 21333.0 -1 FLFCAFVVV 9 75 551.295633955427 1100.576714977654 2 551.2961303591728 MULTI CID FTMS 0 0 0 21083 107185.328125 0.291074449696903 -9 0.2355117797851562 4 Carbamidomethyl (C) _FLFC(Carbamidomethyl (C))AFVVV_ ALG10|p.G272S|1|0.41|ENSG00000139133|chr12:34026307-34026307|G/A|missense_variant;ENSG00000139133|ENST00000266483|ALG10;ENSG00000175548|ENST00000308742|ALG10B 28.17323086031832 0.1727213568982648 3 WQEVVV 6 -1 43.18 0.0 0.0 3.9234 0.0 0.0 342.1652359969242 0.0 342.1652359969242 0.0 26.19070971708595 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 WQEVVV 3.9234 - 489 1 2.18 95373.1 1.0 15136 5949 21083 HBL1_DMSO_200M_050219_1,21087 HBL1_DMSO_200M_050219_1,21087,FLFCAFVVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21089 104.07 490.0 208340.0 25 0 35630.0 + 27100 PFHSILSVL 9 111 506.7953550589975 1011.576157184795 2 506.7952453494072 MULTI CID FTMS 0 0 0 21088 166598.171875 0.271975978796742 10 -0.2074432373046875 1 Unmodified _PFHSILSVL_ ENSG00000163382|ENST00000368235|NAXE;nc|ENSG00000163382|Q8NCW5-2|NAXE 74.39630413441286 0.0193995060682538 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HS{I|L}{I|L}SV{I|L} 9 0 + 56.525 0.0 0.0 5.5878 5.5878 75.919 0.0 0.0 0.0 0.9243259168159312 8.824995917031941 0.9243259168159312 0.9243259168159312 0 0.8182503180159344 1.0969100130080565 1.774227503252014 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HS{I|L}{I|L}SV{I|L};[HS]{I|L}{I|L}M{I|L}SV{I|L};[HS]P{I|L}{M(Oxidation (M))|F}{I|L}SV{I|L};[HS]{I|L}P{M(Oxidation (M))|F}{I|L}SV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}{M(Oxidation (M))|F}{I|L}SV{I|L};[HS]P{M(Oxidation (M))|F}{I|L}{I|L}SV{I|L};[HS]{I|L}M{I|L}{I|L}SV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{M(Oxidation (M))|F}{I|L}{I|L}SV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}S{I|L}{I|L}SV{I|L};[HS]{I|L}{I|L}P{M(Oxidation (M))|F}SV{I|L} 5.5878;5.4964;5.2171;5.1736;5.1636;5.1187;5.0752;5.0653;5.0413;4.9647 +;-;-;-;-;-;-;-;-;- + 3710 1 2.18 84487.0 1.0 15137 5950 21088 HBL1_DMSO_200M_050219_1,21089 HBL1_DMSO_200M_050219_1,21089,PFHSILSVL True True FPHSLLSVI 104.06729 506.795245349407 7636148.0 21088.0 nc|ENSG00000125630|Q9H9Y6-5|POLR1B;;ENSG00000125630|ENST00000263331|POLR1B;;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;;nc|ENSG00000125630|Q9H9Y6-4|POLR1B 3.402526021003723 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21090 104.07 248.0 184040.0 25 0 11506.0 -1 0 114 829.1336547732353 0 829.1336547732353 PEAK CID FTMS 0 0 0 -1 0 2 3 Y 1 -1 5.4846 0.0 0.0 0.33114 0.0 0.0 1374.1203846423705 116.05117975406483 1490.171564396435 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.33114 - 47 + 1 2.18 35972.8 1.0 15138 5950 21088 HBL1_DMSO_200M_050219_1,21090 HBL1_DMSO_200M_050219_1,21090, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21091 104.08 158.0 190850.0 25 0 17210.0 + -1 MLWTCRMWWVK 11 72 814.8803588747978 0 814.8803588747978 PEAK CID FTMS 0 0 0 -1 0 3 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))LWTC(Carbamidomethyl (C))RM(Oxidation (M))WWVK_ REV__ENST00000599579.5_1_19:41310813-41311017:+|nuORF 0.0 0.4761840153648598 3 V 1 -1 5.4846 0.0 0.0 0.33694 0.0 0.0 813.2390980212768 712.4162081354124 1525.6553061566892 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.33694 + + 13 + 1 2.18 28894.4 1.0 15139 5950 21088 HBL1_DMSO_200M_050219_1,21091 HBL1_DMSO_200M_050219_1,21091,MLWTCRMWWVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21092 104.08 347.0 223770.0 25 0 13691.0 -1 0 133 838.7590209841728 0 838.7590209841728 PEAK CID FTMS 0 0 0 -1 0 4 3 VP{I|L}VN{M(Oxidation (M))|F} 6 -1 44.232 0.0 0.0 2.6399 0.0 0.0 838.0276703752866 165.0674990289672 1003.0951694042536 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.848136244196333 VP{I|L}VN{M(Oxidation (M))|F} 2.6399 - 670 + 1 2.18 57601.0 1.0 15140 5950 21088 HBL1_DMSO_200M_050219_1,21092 HBL1_DMSO_200M_050219_1,21092, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21093 104.1 800.0 56729.0 25 0 1060.8 -1 0 109 1093.226245105267 0 1093.226245105267 PEAK CID FTMS 0 0 0 -1 0 5 3 G 1 -1 0.9691 0.0 0.0 0.044364 0.0 0.0 1973.341423460731 151.05210291080314 2124.3935263715343 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.044364 - 2 + 1 2.18 35174.4 0.6499999761581421 15141 5950 21088 HBL1_DMSO_200M_050219_1,21093 HBL1_DMSO_200M_050219_1,21093, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21094 104.1 419.0 79650.0 25 0 4181.7 -1 0 72 928.5704127789204 0 928.4930908083916 PEAK CID FTMS 0 0 0 21088 14323.373046875 0.633949489551491 -6 0.157379150390625 6 3 YR{I|L}E 4 -1 13.197 0.0 0.0 0.71139 0.0 0.0 924.7066692084284 366.1319979303344 1290.838667138763 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YR{I|L}E 0.71139 - 17 + 1 2.18 29599.8 1.0 15142 5950 21088 HBL1_DMSO_200M_050219_1,21094 HBL1_DMSO_200M_050219_1,21094, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21095 104.11 145.0 212020.0 25 0 3776.2 + -1 WMCEYKCDDRC 11 79 819.7964965701103 0 819.7964965701103 PEAK CID FTMS 0 0 0 -1 0 7 3 Carbamidomethyl (C),Oxidation (M) _WM(Oxidation (M))C(Carbamidomethyl (C))EYKC(Carbamidomethyl (C))DDRC(Carbamidomethyl (C))_ REV__ENSG00000161395|ENST00000300658|PGAP3;REV__ENST00000309862.10_1_17:37830244-37844267:-|nuORF;REV__nc|ENSG00000161395|Q96FM1-2|PGAP3;REV__nc|ENSG00000161395|Q96FM1-3|PGAP3 0.0 0.4761840153648598 3 G 1 -1 0.3786 0.0 0.0 0.02312 0.0 0.0 1330.4612049548705 247.07290064029533 1577.5341055951658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.02312 - 2 + 1 2.18 29658.5 1.0 15143 5950 21088 HBL1_DMSO_200M_050219_1,21095 HBL1_DMSO_200M_050219_1,21095,WMCEYKCDDRC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21097 104.12 800.0 61500.0 25 0 3446.3 -1 0 108 848.4893066287041 0 848.4893066287041 PEAK CID FTMS 0 0 0 -1 0 1 3 D 1 -1 5.9691 0.0 0.0 0.35217 0.0 0.0 1444.8680042712767 132.04590784244377 1576.9139121137205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1989700043360188 0.0 D 0.35217 - 25 + 1 2.18 36537.2 0.6800000071525574 15144 5951 21096 HBL1_DMSO_200M_050219_1,21097 HBL1_DMSO_200M_050219_1,21097, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21098 104.13 700.0 206650.0 25 0 55211.0 + 24863 MPMNVADLI 9 123 502.2509347702234 1002.4873166072468 2 502.2513305544853 MULTI CID FTMS 0 0 0 21096 107394.1171875 0.1716278949560569 -20 0.6414337158203125 2 Unmodified _MPMNVADLI_ ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2 70.71552829651908 0.0208223590022201 3 {NN|[MP]|[D{I|L}]|[EV]}NVADM{I|L}{I|L} 9 2 + 64.063 0.0 0.0 6.3905 6.3905 79.677 0.0 0.0 0.0 16.267186419914097 36.47421156864144 16.267186419914097 1.6896155137222024 0 0.7429928190999391 1.3010299956639813 0.3494850021680094 1.079689690656103 {NN|[MP]|[D{I|L}]|[EV]}NVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MNVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVAMD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MGGVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVAMD{I|L}{I|L} 6.3905;6.2219;6.2175;6.171;5.7416;5.4719;5.3034;5.299;5.2525;4.823 -;-;-;+;-;-;-;-;-;- + 1138 1 2.18 113722.7 1.0 15145 5951 21096 HBL1_DMSO_200M_050219_1,21098 HBL1_DMSO_200M_050219_1,21098,MPMNVADLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21099 104.14 497.0 267550.0 25 0 18531.0 + 24248 MAPLALHLL 9 76 489.79388137292216 977.5732098126444 2 489.7940551638603 MULTI CID FTMS 0 0 0 21096 103673.7265625 0.1407060688932112 -14 0.4914169311523437 3 Unmodified _MAPLALHLL_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1 56.04830969593885 0.0282699710924866 3 {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L} 9 0 + 57.458 0.0 0.0 5.8776 5.8776 83.144 0.0 0.0 0.0 7.464341795215319 9.463728584247626 7.464341795215319 5.013487579716767 0 0.7059771852360797 2.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L};{[DS]|[MA]|[CV]|TT}{I|L}PA{I|L}H{I|L}{I|L} 5.8776;5.3648 +;- + 274 + 1 2.18 105052.4 1.0 15146 5951 21096 HBL1_DMSO_200M_050219_1,21099 HBL1_DMSO_200M_050219_1,21099,MAPLALHLL True True MAPLALHLL 104.14297 489.79405516386 15268558.5 21096.0 ENSG00000104951|ENST00000391826|IL4I1;;chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1 7.412968635559082 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21100 104.16 800.0 43611.0 25 0 7282.3 -1 0 48 1159.2055680798792 3474.5948748398378 3 1159.873217761517 MULTI CID FTMS 0 0 0 -1 0 4 3 QQ 2 -1 10.969 0.0 0.0 0.31569 0.0 0.0 2567.2126249392504 648.2415255182249 3215.4541504574754 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QQ 0.31569 - 64 + 1 2.18 28352.6 0.3499999940395355 15147 5951 21096 HBL1_DMSO_200M_050219_1,21100 HBL1_DMSO_200M_050219_1,21100, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21103 104.18 672.0 175610.0 25 0 16837.0 + 9568 FLIQHLPLV 9 113 540.3341676188796 1078.6537823045592 2 540.3343994021416 MULTI CID FTMS 0 0 0 21102 82075.8984375 0.2185133046306193 -21 0.6930770874023438 1 Unmodified _FLIQHLPLV_ ENST00000424913.5_1_3:176771673-176816307:-|nuORF;ENST00000430069.5_1_3:176771676-176782752:-|nuORF 65.23502041540118 0.0231836506122253 3 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L}P 7 5 55.213 0.0 0.0 5.1187 0.0 0.0 0.0 227.1391327402338 227.1391327402338 22.499547704136447 0.0 0.0 0.0 0 1.1549471895720984 1.0457574905606752 0.0 0.5994850021680094 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L}P 5.1187 - 926 1 2.18 97089.5 1.0 15148 5953 21102 HBL1_DMSO_200M_050219_1,21103 HBL1_DMSO_200M_050219_1,21103,FLIQHLPLV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21104 104.18 459.0 178280.0 25 0 32377.0 + 32455 SAFPFPVTV 9 67 964.5137599831749 963.5064835165748 1 964.517626941204 MULTI CID FTMS 0 0 0 21102 112080.359375 0.069714581577788 -39 0.9631271362304688 2 Unmodified _SAFPFPVTV_ ENSG00000127526|ENST00000595753|SLC35E1 81.89019881105858 0.0170587746866453 3 [VP]T[HD]PVTV 9 5 + 68.451 0.0 0.0 7.1044 7.1044 87.361 0.0 0.0 0.0 5.734002963358407 14.973024840566469 5.734002963358407 5.734002963358407 0 0.8807196863200843 1.5228787452803376 1.031234684152075 0.0 [VP]T[HD]PVTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[SA]|[TG]}{M(Oxidation (M))|F}PVTV;[VP]TV{[{M(Oxidation (M))|F}C]|[YS]}VTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YAAPVTV;[VP]T[WY]VTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{[SA]|[TG]}PVTV;[VP]TV[WY]TV;[VP]T{[MG]|[TS]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AA{M(Oxidation (M))|F}PVTV;[VP]TV[YV]{[MG]|[TS]}V 7.1044;6.5093;5.623;5.5992;5.5755;5.5171;5.4458;4.595;4.5632;4.5302 -;-;-;-;-;-;-;-;-;- 399 1 2.18 64435.3 1.0 15149 5953 21102 HBL1_DMSO_200M_050219_1,21104 HBL1_DMSO_200M_050219_1,21104,SAFPFPVTV True True SAFPFPVTV 104.18332 964.517626941204 17589082.0 21102.0 ENSG00000127526|ENST00000595753|SLC35E1 7.051076253255208 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21107 104.2 800.0 13980.0 25 0 1568.3 -1 0 28 1198.527880847454 0 1198.527880847454 PEAK CID FTMS 0 0 0 -1 0 1 3 NM{NN|[MP]|[D{I|L}]|[EV]}S 5 -1 12.218 0.0 0.0 0.51016 0.0 0.0 1461.6216053454957 370.1790865533813 1831.800691898877 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NM{NN|[MP]|[D{I|L}]|[EV]}S 0.51016 - 9 + 1 2.18 17999.4 0.4600000083446502 15150 5955 21106 HBL1_DMSO_200M_050219_1,21107 HBL1_DMSO_200M_050219_1,21107, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21108 104.21 594.0 238710.0 25 0 119230.0 -1 RCTLIYYL 8 68 1101.5802706855527 1100.5729942189528 1 1101.582202136517 MULTI CID FTMS 0 0 0 21106 90330.765625 0.7977178017438752 2 -0.057037353515625 2 Carbamidomethyl (C) _RC(Carbamidomethyl (C))TLIYYL_ ENST00000392717.6_1_2:165542339-165542447:-|nuORF 28.486842064014134 0.4448922141344407 3 TM{I|L}YY{I|L} 6 -1 49.418 0.0 0.0 4.4902 0.0 0.0 298.16404921699376 0.0 298.16404921699376 0.0 25.6271442187095 0.0 0.0 0 0.0 0.0 1.7302046884880935 0.0 TM{I|L}YY{I|L} 4.4902 - 206 1 2.18 94782.8 1.0 15151 5955 21106 HBL1_DMSO_200M_050219_1,21108 HBL1_DMSO_200M_050219_1,21108,RCTLIYYL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21110 104.23 800.0 113440.0 25 0 18735.0 + 22484 LPVPAFNVI 9 89 485.29237573358944 968.5701985339788 2 485.2918273806572 MULTI CID FTMS 0 0 0 21109 73319.0234375 0.0432841925581869 16 -0.1835708618164062 1 Unmodified _LPVPAFNVI_ ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000111674|P09104-2|ENO2 42.96799951952854 0.0591636306142405 3 [PA]{M(Oxidation (M))|F}N{I|L}PVV{I|L} 9 6 + 56.247 0.0 0.0 5.8072 5.8072 75.265 0.0 0.0 0.0 3.432507482934888 10.330145895351848 3.432507482934888 0.1673669740765362 0 0.7429928190999391 0.958607314841775 0.0 1.0356668758921828 [PA]{M(Oxidation (M))|F}N{I|L}PVV{I|L};[PA]{M(Oxidation (M))|F}NV{I|L}PV{I|L};[PA]{M(Oxidation (M))|F}NVP{I|L}V{I|L};[PA]{M(Oxidation (M))|F}N{I|L}VPV{I|L};[{I|L}P]A{M(Oxidation (M))|F}NPVV{I|L};[{I|L}P]A{M(Oxidation (M))|F}NVPV{I|L};[PA]{M(Oxidation (M))|F}{I|L}NPVV{I|L};[PA]{M(Oxidation (M))|F}{I|L}NVPV{I|L};[{I|L}P]V[PA]{M(Oxidation (M))|F}NV{I|L};[{I|L}P][PG]{I|L}{M(Oxidation (M))|F}NV{I|L} 5.8072;5.7899;5.6898;5.4964;5.4528;5.142;4.9992;4.6884;4.6265;4.6265 -;-;-;-;-;-;-;-;+;- + 1113 1 2.18 73508.7 0.3799999952316284 15152 5956 21109 HBL1_DMSO_200M_050219_1,21110 HBL1_DMSO_200M_050219_1,21110,LPVPAFNVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21111 104.24 800.0 204780.0 25 0 20398.0 + 15329 IPLPLGTVTI 10 127 512.3261868174338 1022.6378207016676 2 512.3265258669853 MULTI CID FTMS 0 0 0 21109 90496.6640625 0.1561528962523109 -19 0.5999526977539062 2 Unmodified _IPLPLGTVTI_ ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1 109.62928328672726 0.002910301582582 3 [{I|L}P]GTV{I|L}P{I|L}T{I|L} 10 6 + 82.935 0.0 0.0 8.1099 8.1099 86.988 0.0 0.0 0.0 16.70941280735775 15.026975159433531 15.026975159433531 3.3718049650046424 0 0.9247425010840048 1.5228787452803376 2.7134679910804405 0.0 [{I|L}P]GTV{I|L}P{I|L}T{I|L};[{I|L}P]GT{I|L}P{I|L}VT{I|L};[{I|L}P]GT{I|L}VP{I|L}T{I|L};[{I|L}P]{I|L}PGT{I|L}VT{I|L};[{I|L}P]GT{I|L}PV{I|L}T{I|L};[{I|L}P]GTVT{I|L}P{I|L}{I|L};[{I|L}P]GTV{I|L}PT{I|L}{I|L};[{I|L}P]GTV{I|L}TP{I|L}{I|L};[{I|L}P]{I|L}PGTV{I|L}T{I|L};[{I|L}P]P{I|L}GT{I|L}VT{I|L} 8.1099;7.7802;7.5;7.4957;7.4896;7.4876;7.3016;7.2797;7.2051;7.1178 -;-;-;-;-;-;-;-;-;- 4202 1 2.18 127708.9 0.7300000190734863 15153 5956 21109 HBL1_DMSO_200M_050219_1,21111 HBL1_DMSO_200M_050219_1,21111,IPLPLGTVTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21114 104.26 401.0 179140.0 25 0 15561.0 + 8895 FAFQAEIAQL 10 106 569.3007317942594 1136.586910655319 2 569.3008911013603 MULTI CID FTMS 0 0 0 21113 117860.0546875 0.4637446373495428 7 -0.0738296508789062 1 Unmodified _FAFQAEIAQL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P 56.17704186161178 0.0466144807663799 3 [QA]{M(Oxidation (M))|F}EA{M(Oxidation (M))|F}{I|L} 7 5 50.068 0.0 0.0 4.4051 0.0 0.0 0.0 327.1658310461576 327.1658310461576 21.49333996230069 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.6989700043360187 1.055462187404089 [QA]{M(Oxidation (M))|F}EA{M(Oxidation (M))|F}{I|L} 4.4051 - 2574 1 2.18 56930.8 1.0 15154 5958 21113 HBL1_DMSO_200M_050219_1,21114 HBL1_DMSO_200M_050219_1,21114,FAFQAEIAQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21117 104.28 800.0 160020.0 25 0 8269.8 + 2787 ATTEFLWSV 9 93 1053.5254658499016 1052.5181893833017 1 1053.527636706829 MULTI CID FTMS 0 0 0 21116 80452.265625 0.5962773551962206 6 -0.0641250610351562 1 Unmodified _ATTEFLWSV_ ENSG00000120334|ENST00000682279|CENPL;nc|ENSG00000120334|Q8N0S6-2|CENPL 71.13359017698441 0.0206607516130725 3 [W{I|L}]C{M(Oxidation (M))|F}{I|L}WSV 8 4 + 68.91 0.0 0.0 6.5472 6.5472 85.253 0.0 0.0 0.0 10.996075289514096 16.40978057358332 10.996075289514096 5.0147128475507685 0 0.9749073637206092 1.154901959985743 0.4247425010840047 0.0 [W{I|L}]C{M(Oxidation (M))|F}{I|L}WSV;[W{I|L}]C{M(Oxidation (M))|F}{I|L}{[DA]|[EG]}SV;[W{I|L}]C{M(Oxidation (M))|F}{I|L}SWV;[W{I|L}]{M(Oxidation (M))|F}C{I|L}WSV;[W{I|L}]C{I|L}EG{M(Oxidation (M))|F}SV;[W{I|L}]C{M(Oxidation (M))|F}{I|L}SADV;[W{I|L}]C{M(Oxidation (M))|F}W{I|L}SV;{[ET]|[MV]}{M(Oxidation (M))|F}[TA]{I|L}WSV;[W{I|L}]{M(Oxidation (M))|F}C{I|L}{[DA]|[EG]}SV;{[ET]|[MV]}{M(Oxidation (M))|F}{I|L}TAWSV 6.5472;6.0707;6.0006;5.9233;5.9161;5.8768;5.5716;5.5025;5.4468;5.4164 -;-;-;-;-;-;-;-;-;- 6696 1 2.18 84116.5 0.4600000083446502 15155 5960 21116 HBL1_DMSO_200M_050219_1,21117 HBL1_DMSO_200M_050219_1,21117,ATTEFLWSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21120 104.3 800.0 120210.0 25 0 10981.0 + 29521 QLLNWVYLSL 10 114 624.8518504943864 1247.6891480555728 2 624.8520385622978 MULTI CID FTMS 0 0 0 21119 69792.3125 0.2083124284418452 -14 0.2984161376953125 1 Unmodified _QLLNWVYLSL_ ENSG00000165424|ENST00000372336|ZCCHC24 49.55428908609986 0.0827668555218455 3 [Q{I|L}]{I|L}[Q{I|L}]{I|L}S[YR]D 10 7 + 40.925 0.0 0.0 3.2801 3.2801 75.993 0.0 0.0 0.0 4.114459258636806 6.220318786936261 4.114459258636806 6.001476483020646 0 0.6989700043360187 1.2218487496163564 0.3807196863200844 0.3807196863200844 [Q{I|L}]{I|L}[Q{I|L}]{I|L}S[YR]D;{[TV]|[{I|L}S]}GK{I|L}P{I|L}S[YR]D;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}P{I|L}S{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L};{[VA]|[{I|L}G]}A{I|L}[Q{I|L}]{I|L}S[YR]D;{[VA]|[{I|L}G]}SK{I|L}P{I|L}S[YR]D;{[QN]|[E{I|L}]|[KN]}KKP{I|L}S{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L};{[VA]|[{I|L}G]}[KP]{I|L}S{I|L}S[YR]D;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}P{I|L}S[YR]D;[VP][VP]KG{I|L}S[HD]S{I|L};[VP]N{I|L}P{I|L}[PA]{NN|[MP]|[D{I|L}]|[EV]}S{I|L} 3.2801;2.7991;2.5016;2.4157;2.1953;2.0545;1.9729;1.7753;1.5216;1.4885 -;-;-;-;-;-;-;-;-;- 1450 1 2.18 84020.3 0.3600000143051147 15156 5962 21119 HBL1_DMSO_200M_050219_1,21120 HBL1_DMSO_200M_050219_1,21120,QLLNWVYLSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21122 104.3 146.0 321860.0 25 0 41681.0 + 4326 DARWWAVVV 9 55 551.295633955427 1100.576714977654 2 551.2960082888603 MULTI CID FTMS 0 0 0 21121 266366.25 0.7233490907091227 5 -0.056640625 1 Unmodified _DARWWAVVV_ ENSG00000157593|ENST00000393812|SLC35B2;nc|ENSG00000157593|Q8TB61-2|SLC35B2 15.248480904072842 0.4239247793462406 3 GEVVV 5 6 47.959 0.0 0.0 4.3576 0.0 0.0 599.2943073084175 0.0 599.2943073084175 0.0 33.26606256887672 0.0 0.0 0 1.0 0.0 0.0 0.0 GEVVV 4.3576 - 87 1 2.18 50816.8 1.0 15157 5963 21121 HBL1_DMSO_200M_050219_1,21122 HBL1_DMSO_200M_050219_1,21122,DARWWAVVV False True DARWWAVVV 104.30451 551.29600828886 6317814.5 21121.0 nc|ENSG00000157593|Q8TB61-2|SLC35B2;;ENSG00000157593|ENST00000393812|SLC35B2 6.456129233042399 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21123 104.32 800.0 92946.0 25 0 6535.3 + -1 ATTEFLWSV 9 86 1052.999167832393 0 1053.186083972454 PEAK CID FTMS 0 0 0 21121 13626.23046875 1.0 0 0.0 2 ENSG00000120334|ENST00000682279|CENPL;nc|ENSG00000120334|Q8N0S6-2|CENPL 3 VSVS{I|L}AT 7 -1 47.049 0.0 0.0 2.2362 0.0 0.0 1069.476899041936 374.1363924615844 1443.6132915035205 0.0 0.0 0.0 0.0 0 0.0 0.0 2.841129063296272 0.0 VSVS{I|L}AT 2.2362 - 4431 + 1 2.18 54282.0 0.8299999833106995 15158 5963 21121 HBL1_DMSO_200M_050219_1,21123 HBL1_DMSO_200M_050219_1,21123, False False ATTEFLWSV 104.31839 1053.18608397245 3003171.0 21121.0 ENSG00000120334|ENST00000682279|CENPL;;nc|ENSG00000120334|Q8N0S6-2|CENPL 5.859885851542155 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21128 104.34 501.0 476250.0 25 0 36811.0 -1 0 113 872.4175932028735 3485.641266945094 4 872.6650878787041 MULTI CID FTMS 0 0 0 21127 70383.3203125 0.0031708754687047 74 -0.9255142211914062 1 3 {I|L}MDAV 5 -1 27.479 0.0 0.0 0.78836 0.0 0.0 2614.248790179997 339.1136195684278 2953.3624097484244 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5796896906561032 0.0 {I|L}MDAV 0.78836 - 1024 + 1 2.18 161497.2 1.0 15159 5967 21127 HBL1_DMSO_200M_050219_1,21128 HBL1_DMSO_200M_050219_1,21128, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21129 104.36 800.0 126890.0 25 0 8097.2 + 26149 NPVDILTYV 9 80 1033.5586259924862 1032.5513495258865 1 1033.564013659954 MULTI CID FTMS 0 0 0 21127 112037.8671875 0.9560776278514964 -9 0.0819473266601562 2 Unmodified _NPVDILTYV_ ENSG00000111716|ENST00000350669|LDHB;ENSG00000134333|ENST00000422447|LDHA;ENSG00000166800|ENST00000280706|LDHAL6A;ENSG00000171989|ENST00000307144|LDHAL6B;ENST00000398295.3_1_2:85004811-85005102:-|nuORF;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-5|LDHA 55.23464941255904 0.0288927259679799 3 [NP]VD{I|L}{I|L}TYV 9 0 + 93.602 0.0 0.0 9.0651 9.0651 85.411 0.0 0.0 0.0 1.7609125905568137 16.478174818886373 1.7609125905568137 1.7609125905568137 0 0.0 1.3979400086720375 1.5021934810768762 1.174742501084005 + + [NP]VD{I|L}{I|L}TYV;[VP]ND{I|L}{I|L}TYV;[VP]DN{I|L}{I|L}TYV;[VP]D{I|L}N{I|L}TYV;[NP]VD{I|L}[YT]{I|L}V;[VP]ND{I|L}[YT]{I|L}V;[VP]DN{I|L}[YT]{I|L}V;[VP]GGD{I|L}{I|L}TYV;[VP]DGG{I|L}{I|L}TYV;[NP]VD[YT]{I|L}{I|L}V 9.0651;8.8946;8.603;7.5463;7.4457;7.2751;6.9836;6.8651;6.5736;6.5722 +;-;-;-;-;-;-;-;-;- + 1277 1 2.18 72881.1 0.4399999976158142 15160 5967 21127 HBL1_DMSO_200M_050219_1,21129 HBL1_DMSO_200M_050219_1,21129,NPVDILTYV True True NPVDILTYV 104.35568 1033.56401365995 1903315.625 21127.0 ENSG00000111716|ENST00000350669|LDHB;;nc|ENSG00000134333|P00338-3|LDHA;;ENSG00000166800|ENST00000280706|LDHAL6A;;ENSG00000171989|ENST00000307144|LDHAL6B;;nc|ENSG00000134333|P00338-2|LDHA;;ENST00000398295.3_1_2:85004811-85005102:-|nuORF;;nc|ENSG00000134333|P00338-5|LDHA;;ENSG00000134333|ENST00000422447|LDHA 5.429071426391602 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21134 104.38 790.0 23401.0 25 0 16054.0 -1 0 18 1103.333300769329 0 1103.333300769329 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.18 22870.9 1.0 15161 5971 21133 HBL1_DMSO_200M_050219_1,21134 HBL1_DMSO_200M_050219_1,21134, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21135 104.4 800.0 130140.0 25 0 6005.1 + 30213 QVYDGFSFI 9 99 1075.5091898936632 1074.5019134270633 1 1075.510546863079 MULTI CID FTMS 0 0 0 21133 105411.953125 0.7951328386945912 16 -0.165191650390625 2 Unmodified _QVYDGFSFI_ ENSG00000116918|ENST00000366639|TSNAX 126.56589448801844 0.0036077350702044 3 {[QV]|[N{I|L}]|[RA]|[KV]}YDG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L} 9 0 + 94.624 0.0 0.0 8.8063 8.8063 96.642 0.0 0.0 0.0 25.0 5.967422566383007 5.967422566383007 16.020599913279625 0 1.055462187404089 1.5228787452803376 2.048455006504028 1.5994850021680094 + + {[QV]|[N{I|L}]|[RA]|[KV]}YDG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YDGHP{M(Oxidation (M))|F}{I|L};[YQ]VDG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}QVG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}GAR{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L};[YQ]DVG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YD[YQ]{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GVDG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YDGE[HD]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[ES]|[DT]|[{I|L}C]}YCS{M(Oxidation (M))|F}{I|L} 8.8063;7.3153;6.4797;5.9287;5.791;5.7648;5.5776;5.5419;5.5264;5.4509 +;-;-;-;-;-;-;-;-;- + 7396 1 2.18 73404.2 0.4399999976158142 15162 5971 21133 HBL1_DMSO_200M_050219_1,21135 HBL1_DMSO_200M_050219_1,21135,QVYDGFSFI True True QVYDGFSFI 104.39779 1075.51054686308 1230976.125 21133.0 ENSG00000116918|ENST00000366639|TSNAX 7.48390261332194 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21137 104.4 73.0 920830.0 25 0 67873.0 + 24249 MAPLALHLL 9 74 489.79388137292216 977.5732098126444 2 489.7940246462822 MULTI CID FTMS 0 0 0 21136 710921.125 0.9648627488236886 7 -0.0720901489257812 1 Unmodified _MAPLALHLL_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1 36.46614268402704 0.0948557732959553 3 {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L} 9 0 + 53.515 0.0 0.0 5.4743 5.4743 90.218 0.0 0.0 0.0 19.57039304039391 6.955999313992223 6.955999313992223 53.51518780601921 0 0.3494850021680094 2.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L} 5.4743 + + 123 + 1 2.18 55781.2 1.0 15163 5972 21136 HBL1_DMSO_200M_050219_1,21137 HBL1_DMSO_200M_050219_1,21137,MAPLALHLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21138 104.4 98.0 551420.0 25 0 162920.0 + 24864 MPMNVADLI 9 75 502.2509347702234 1002.4873166072468 2 502.2512084841728 MULTI CID FTMS 0 0 0 21136 496966.125 0.7942078405403219 1 -0.0069122314453125 2 Unmodified _MPMNVADLI_ ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2 60.38955033654506 0.025866396858536 3 {NN|[MP]|[D{I|L}]|[EV]}NMVAD{I|L}{I|L} 9 2 + 68.751 0.0 0.0 6.8581 6.8581 78.454 0.0 0.0 0.0 21.75173648495437 38.25643416741073 21.75173648495437 0.0529732476748421 0 0.8182503180159344 1.6989700043360187 0.0 1.1237125054200234 {NN|[MP]|[D{I|L}]|[EV]}NMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MNVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NM[PG]M{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MN[PG]M{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVAMD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MGGVAD{I|L}{I|L} 6.8581;6.8528;6.5578;6.2092;6.1195;5.9395;5.9342;5.8192;5.6726;5.6392 -;-;+;-;-;-;-;-;-;- + 352 1 2.18 44971.5 1.0 15164 5972 21136 HBL1_DMSO_200M_050219_1,21138 HBL1_DMSO_200M_050219_1,21138,MPMNVADLI True True MPMNVADLI 104.40469 502.251208484173 24783051.5 21136.0 nc|ENSG00000156976|Q14240-2|EIF4A2;;ENSG00000141543|ENST00000649764|EIF4A3;;ENSG00000156976|ENST00000323963|EIF4A2 4.159196138381958 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21142 104.42 152.0 475680.0 25 0 37813.0 + 9569 FLIQHLPLV 9 99 540.3341676188796 1078.6537823045592 2 540.3340331912041 MULTI CID FTMS 0 0 0 21141 292565.71875 0.7789071242927245 1 -0.0333251953125 1 Unmodified _FLIQHLPLV_ ENST00000424913.5_1_3:176771673-176816307:-|nuORF;ENST00000430069.5_1_3:176771676-176782752:-|nuORF 39.94969957227396 0.0757326808254658 3 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L}P 7 5 49.059 0.0 0.0 4.5482 0.0 0.0 0.0 227.13776602942167 227.13776602942167 24.634475811582632 0.0 0.0 0.0 0 1.0994850021680094 0.8239087409443188 0.0 0.2614393726401688 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L}P 4.5482 - 432 1 2.18 64630.4 1.0 15165 5975 21141 HBL1_DMSO_200M_050219_1,21142 HBL1_DMSO_200M_050219_1,21142,FLIQHLPLV True True FLIQHLPLV 104.4185 540.334033191204 13938379.5 21141.0 ENST00000424913.5_1_3:176771673-176816307:-|nuORF;;ENST00000430069.5_1_3:176771676-176782752:-|nuORF 6.182704289754232 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21143 104.43 800.0 196160.0 25 0 16603.0 + 10078 FPSEDILLV 9 91 1032.5611704520422 1031.5538939854423 1 1032.564135730267 MULTI CID FTMS 0 0 0 21141 83955.203125 0.3615798515170366 -44 0.9486618041992188 2 Unmodified _FPSEDILLV_ ENSG00000121350|ENST00000240651|PYROXD1 67.34385681178166 0.0221257235307089 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SED{I|L}{I|L}{I|L}V 9 0 + 79.843 0.0 0.0 7.7401 7.7401 90.971 0.0 0.0 0.0 7.8075105920777474 16.478174818886373 7.8075105920777474 7.8075105920777474 0 0.0 1.6989700043360187 1.6989700043360187 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SED{I|L}{I|L}{I|L}V;[PS]ED{M(Oxidation (M))|F}{I|L}{I|L}{I|L}V;[PS]ED{I|L}{M(Oxidation (M))|F}{I|L}{I|L}V;[PS]E{M(Oxidation (M))|F}D{I|L}{I|L}{I|L}V;[PS]ED{I|L}{I|L}{M(Oxidation (M))|F}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}M{I|L}{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}P{M(Oxidation (M))|F}{I|L}{I|L}V;[PS]{M(Oxidation (M))|F}ED{I|L}{I|L}{I|L}V;[PS]ED{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}P{I|L}{M(Oxidation (M))|F}{I|L}V 7.7401;6.9832;6.6914;6.5561;6.2054;6.1635;5.8717;5.8013;5.6839;5.3857 +;-;-;-;-;-;-;-;-;- + 1569 1 2.18 104528.0 0.3700000047683716 15166 5975 21141 HBL1_DMSO_200M_050219_1,21143 HBL1_DMSO_200M_050219_1,21143,FPSEDILLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21144 104.45 800.0 13377.0 25 0 1650.5 -1 0 26 1146.3811144031704 0 1146.603442370892 PEAK CID FTMS 0 0 0 -1 0 3 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.18 18766.3 0.3100000023841858 15167 5975 21141 HBL1_DMSO_200M_050219_1,21144 HBL1_DMSO_200M_050219_1,21144, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21147 104.47 800.0 29863.0 25 0 1015.7 -1 0 70 1085.7617101994003 0 1085.459765613079 PEAK CID FTMS 0 0 0 -1 0 1 3 G 1 -1 5.4846 0.0 0.0 0.2528 0.0 0.0 1226.077972545482 883.3728121393186 2109.4507846848005 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.2528 - 9 + 1 2.18 23175.7 0.7900000214576721 15168 5977 21146 HBL1_DMSO_200M_050219_1,21147 HBL1_DMSO_200M_050219_1,21147, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21150 104.48 499.0 552380.0 25 0 43476.0 + 25349 NAPAIIFI 8 145 858.5078736047313 857.5005971381313 1 858.5073119997978 MULTI CID FTMS 0 0 0 21149 292366.78125 0.4689103592206928 -15 0.1514816284179687 1 Unmodified _NAPAIIFI_ ENSG00000013275|ENST00000157812|PSMC4;ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;ENST00000596386.1_1_19:40477100-40485896:+|nuORF;ENST00000601697.5_1_19:40477100-40486546:+|nuORF;nc|ENSG00000013275|P43686-2|PSMC4 112.55848718100152 0.0325655929039045 3 {[QG]|[NA]}PA{I|L}{I|L}{M(Oxidation (M))|F}{I|L} 8 0 + 80.029 0.0 0.0 9.3329 9.3329 85.263 0.0 0.0 0.0 1.5757731917779267 16.409780573583312 1.5757731917779267 1.5757731917779267 0 1.3979400086720375 0.958607314841775 0.0 1.610924374808178 + + {[QG]|[NA]}PA{I|L}{I|L}{M(Oxidation (M))|F}{I|L};[PA]NA{I|L}{I|L}{M(Oxidation (M))|F}{I|L};[PA]GQ{I|L}{I|L}{M(Oxidation (M))|F}{I|L};[PA]{I|L}AN{I|L}{M(Oxidation (M))|F}{I|L};[PA]AN{I|L}{I|L}{M(Oxidation (M))|F}{I|L};{[QG]|[NA]}PA{I|L}{M(Oxidation (M))|F}{I|L}{I|L};[PA]{I|L}NA{I|L}{M(Oxidation (M))|F}{I|L};[PA]NA{I|L}{M(Oxidation (M))|F}{I|L}{I|L};{[QG]|[NA]}P{I|L}A{I|L}{M(Oxidation (M))|F}{I|L};[PA]N{I|L}A{I|L}{M(Oxidation (M))|F}{I|L} 9.3329;9.1491;8.4911;8.4776;8.334;8.2811;8.18;8.0974;7.8073;7.6235 +;-;-;-;-;-;-;-;-;- + 1950 1 2.18 180599.3 1.0 15169 5979 21149 HBL1_DMSO_200M_050219_1,21150 HBL1_DMSO_200M_050219_1,21150,NAPAIIFI True True NAPAIIFI 104.48124 858.507311999798 5702345.0 21149.0 ENSG00000165280|ENST00000358901|VCP;;ENSG00000013275|ENST00000157812|PSMC4;;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;;ENST00000493886.5_1_9:35062192-35072350:-|nuORF;;ENST00000596386.1_1_19:40477100-40485896:+|nuORF;;nc|ENSG00000013275|P43686-2|PSMC4;;ENST00000601697.5_1_19:40477100-40486546:+|nuORF 4.843143860499064 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21151 104.48 189.0 549610.0 25 0 23375.0 + 39857 VFIDGPLAL 9 113 944.5447043589376 943.5374278923374 1 944.5458251833916 MULTI CID FTMS 0 0 0 21149 313221.46875 0.2627100994185148 27 -0.3866119384765625 2 Unmodified _VFIDGPLAL_ ENSG00000149743|ENST00000317459|TRPT1;ENST00000541928.1_1_11:63991649-63992138:-|nuORF;nc|ENSG00000149743|Q86TN4-2|TRPT1;nc|ENSG00000149743|Q86TN4-3|TRPT1;nc|ENSG00000149743|Q86TN4-4|TRPT1 85.35673624503755 0.0162188719545379 3 [{I|L}P]AGDV{M(Oxidation (M))|F}{I|L}{I|L} 9 7 + 74.536 0.0 0.0 7.8996 7.8996 85.966 0.0 0.0 0.0 19.03089986991944 16.478174818886373 16.478174818886373 3.0102999566398125 0 0.0 1.5228787452803376 1.372363747448347 0.0 [{I|L}P]AGDV{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]GADV{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]QDV{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]GDAV{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]ENV{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]AGVD{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]GD{I|L}G{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]AGDV{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}P]GAVD{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]QVD{M(Oxidation (M))|F}{I|L}{I|L} 7.8996;7.5806;7.5321;7.4359;7.0264;6.9992;6.9255;6.793;6.6802;6.6317 -;-;-;-;-;-;-;-;-;- 3674 1 2.18 69046.2 1.0 15170 5979 21149 HBL1_DMSO_200M_050219_1,21151 HBL1_DMSO_200M_050219_1,21151,VFIDGPLAL True True VFIDGPLAL 104.4849 944.545825183392 10088061.0 21149.0 ENST00000541928.1_1_11:63991649-63992138:-|nuORF;;ENSG00000149743|ENST00000317459|TRPT1;;nc|ENSG00000149743|Q86TN4-4|TRPT1;;nc|ENSG00000149743|Q86TN4-3|TRPT1;;nc|ENSG00000149743|Q86TN4-2|TRPT1 6.488475958506267 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21153 104.49 220.0 347080.0 25 0 39559.0 + 15330 IPLPLGTVTI 10 88 512.3261868174338 1022.6378207016676 2 512.3263427615166 MULTI CID FTMS 0 0 0 21152 363445.625 0.6271290501358785 5 -0.0398406982421875 1 Unmodified _IPLPLGTVTI_ ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1 89.42679046578446 0.0093746490447373 3 [{I|L}P]GTV{I|L}P{I|L}T{I|L} 10 6 + 86.38 0.0 0.0 8.4468 8.4468 95.347 0.0 0.0 0.0 17.501225267834002 15.026975159433531 15.026975159433531 12.11249690339386 0 0.75 1.5228787452803376 2.6307196863200843 0.0 [{I|L}P]GTV{I|L}P{I|L}T{I|L};[{I|L}P]{I|L}PGT{I|L}VT{I|L};[{I|L}P]GTV{I|L}PT{I|L}{I|L};[{I|L}P]P{I|L}GT{I|L}VT{I|L};[{I|L}P]{I|L}PGTV{I|L}T{I|L};[{I|L}P]P{I|L}GTV{I|L}T{I|L};[{I|L}P]GT[{I|L}P]{I|L}VT{I|L};[{I|L}T][PG]V{I|L}P{I|L}T{I|L};[{I|L}P]{I|L}PG{I|L}TVT{I|L};[{I|L}P]GTV{I|L}TP{I|L}{I|L} 8.4468;7.2624;7.2008;7.1402;7.0011;6.8789;6.8509;6.7354;6.708;6.6788 -;-;-;-;-;-;-;-;-;- 1810 1 2.18 63622.7 1.0 15171 5980 21152 HBL1_DMSO_200M_050219_1,21153 HBL1_DMSO_200M_050219_1,21153,IPLPLGTVTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21154 104.51 800.0 56546.0 25 0 2095.3 -1 0 105 912.6584315106312 6381.558085308219 7 913.3518554568292 MULTI CID FTMS 0 0 0 21152 42730.75390625 0.748448428662202 -1 0.0150299072265625 2 3 [PA]{I|L}AM 5 -1 15.75 0.0 0.0 0.24681 0.0 0.0 0.0 5895.280411318238 5895.280411318238 10.265931504406469 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [PA]{I|L}AM 0.24681 - 176 1 2.18 36317.0 0.3700000047683716 15172 5980 21152 HBL1_DMSO_200M_050219_1,21154 HBL1_DMSO_200M_050219_1,21154, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21158 104.52 265.0 401900.0 25 0 75582.0 + 22593 LPYGFIQEL 9 79 1079.578144197549 1078.570867730949 1 1079.577441394329 MULTI CID FTMS 0 0 0 21157 253349.28125 0.9977802428071731 -4 0.0435028076171875 1 Unmodified _LPYGFIQEL_ ENSG00000130939|ENST00000343090|UBE4B;nc|ENSG00000130939|O95155-2|UBE4B;nc|ENSG00000130939|O95155-3|UBE4B;nc|ENSG00000130939|O95155-4|UBE4B 71.92227651296345 0.0203558744033348 3 [{I|L}P]YG{M(Oxidation (M))|F}{I|L}QE{I|L} 9 0 + 81.596 0.0 0.0 7.5652 7.5652 83.902 0.0 0.0 0.0 2.1792500248472635 16.478174818886373 2.1792500248472635 2.1792500248472635 0 1.579689690656103 1.5228787452803376 0.3494850021680094 0.3252574989159953 + + [{I|L}P]YG{M(Oxidation (M))|F}{I|L}QE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{M(Oxidation (M))|F}{I|L}{I|L}QE{I|L};[{I|L}P]YG{M(Oxidation (M))|F}{I|L}GAE{I|L};{I|L}PYQ{I|L}{M(Oxidation (M))|F}GE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{M(Oxidation (M))|F}{I|L}Q{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{M(Oxidation (M))|F}{I|L}{I|L}GAE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L}{M(Oxidation (M))|F}{I|L}QE{I|L};[{I|L}P]YG{M(Oxidation (M))|F}{I|L}GS{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{M(Oxidation (M))|F}{I|L}QE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{M(Oxidation (M))|F}{I|L}QE{I|L}{I|L} 7.5652;7.3631;7.0319;6.9736;6.901;6.8299;6.8049;6.7528;6.6866;6.6219 +;-;-;-;-;-;-;-;-;- + 2482 1 2.215 73491.8 1.0 15173 5983 21157 HBL1_DMSO_200M_050219_1,21158 HBL1_DMSO_200M_050219_1,21158,LPYGFIQEL True True LPYGFIQEL 104.52087 1079.57744139433 2056845.625 21157.0 nc|ENSG00000130939|O95155-4|UBE4B;;ENSG00000130939|ENST00000343090|UBE4B;;nc|ENSG00000130939|O95155-3|UBE4B;;nc|ENSG00000130939|O95155-2|UBE4B 8.048528353373209 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21163 104.55 800.0 135770.0 25 0 17969.0 23873 LVLCICAEEL 10 105 553.2854918766036 0 553.2855102419853 PEAK CID FTMS 0 0 0 21162 82854.609375 0.88544854522522 1 -0.03021240234375 1 Unmodified _LVLCICAEEL_ ENST00000541340.5_1_11:73950145-73962300:+|nuORF;nc|ENSG00000214517|Q9Y570-3|PPME1 21.74664581756881 0.2842027874392456 3 {I|L}PD{I|L}T 5 8 28.039 0.0 0.0 2.5385 0.0 0.0 212.1513556562972 350.0855028932025 562.2368585494996 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.7134679910804405 0.0 {I|L}PD{I|L}T 2.5385 - 274 + 1 2.215 85791.6 0.3400000035762787 15174 5987 21162 HBL1_DMSO_200M_050219_1,21163 HBL1_DMSO_200M_050219_1,21163,LVLCICAEEL False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_1 21164 104.56 800.0 119530.0 25 0 20008.0 + 14910 ILLKDILSV 9 94 507.3345487198447 1012.6545445064894 2 507.3351928591728 MULTI CID FTMS 0 0 0 21162 86945.4921875 0.7612310590385485 -2 0.0081329345703125 2 Unmodified _ILLKDILSV_ ENSG00000149311|ENST00000675843|ATM 60.07390631473393 0.0260411565414776 3 {I|L}{I|L}DK{I|L}{I|L}{I|L}SV 9 2 + 63.099 0.0 0.0 6.2311 6.2311 79.706 0.0 0.0 0.0 4.828044973122246 1.9013044051998087 1.9013044051998087 1.9013044051998087 0 1.1989700043360187 1.6989700043360187 0.6549471895720984 0.0 {I|L}{I|L}DK{I|L}{I|L}{I|L}SV;{I|L}{I|L}DK{I|L}{I|L}SV{I|L};[VS]G{I|L}{I|L}{I|L}{I|L}{I|L}SV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}{I|L}{I|L}SV;[VS]G{I|L}{I|L}{I|L}{I|L}SV{I|L};{I|L}{I|L}{I|L}DK{I|L}{I|L}SV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}{I|L}SV{I|L};{I|L}{I|L}{I|L}KD{I|L}{I|L}SV;{I|L}{I|L}{I|L}DK{I|L}SV{I|L};{I|L}{I|L}D{I|L}K{I|L}{I|L}SV 6.2311;6.0433;5.7543;5.61;5.5666;5.4483;5.4223;5.304;5.2606;5.1957 -;-;-;-;-;-;-;+;-;- + 959 1 2.215 77991.1 0.3199999928474426 15175 5987 21162 HBL1_DMSO_200M_050219_1,21164 HBL1_DMSO_200M_050219_1,21164,ILLKDILSV True True ILLKDILSV 104.56306 507.335192859173 498765.25 21162.0 ENSG00000149311|ENST00000675843|ATM 3.155924797058105 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21166 104.58 546.0 202440.0 25 0 20116.0 + 29522 QLLNWVYLSL 10 109 624.8519804614957 1247.689407989791 2 624.8522216677666 MULTI CID FTMS 0 0 0 21165 227915.90625 0.5553682408312154 2 -0.0575714111328125 1 Unmodified _QLLNWVYLSL_ ENSG00000165424|ENST00000372336|ZCCHC24 57.72198328787511 0.0425618229276495 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}P{I|L}S{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L} 11 6 + 38.158 0.0 0.0 3.0583 3.0583 72.963 0.0 0.0 0.0 0.3523839139362508 6.946470021120113 0.3523839139362508 3.534087492996392 0 0.8494850021680094 0.0 1.579689690656103 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}P{I|L}S{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KP{I|L}S{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L};[VP]N{I|L}[HD][Q{I|L}]{I|L}S{I|L};{[TV]|[{I|L}S]}GK{I|L}[R{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]}S{I|L};[VP][VP]KG{I|L}S[HD]S{I|L};[DN]S{I|L}Q{I|L}[{I|L}P][HV]{I|L};{[TV]|[{I|L}S]}G{I|L}K[R{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]}S{I|L};{[TV]|[{I|L}S]}GK{I|L}[R{M(Oxidation (M))|F}]{[CP]|[EA]}D{I|L};{[TV]|[{I|L}S]}GK{I|L}[R{M(Oxidation (M))|F}]{[TV]|[{I|L}S]}D{I|L};[DN]Q{I|L}S{I|L}[{I|L}P][HV]{I|L} 3.0583;2.775;2.2144;1.8581;1.7671;1.5971;1.5749;1.2764;1.2764;1.2612 -;-;-;-;-;-;-;-;-;- 898 1 2.215 93625.2 1.0 15176 5988 21165 HBL1_DMSO_200M_050219_1,21166 HBL1_DMSO_200M_050219_1,21166,QLLNWVYLSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21167 104.59 800.0 183350.0 25 0 30383.0 + 33972 SLIFKLEEL 9 116 546.3217143581778 1090.6288757831555 2 546.3217040896416 MULTI CID FTMS 0 0 0 21165 107809.75 0.5808997642833846 -7 0.0576248168945312 2 Unmodified _SLIFKLEEL_ ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2 89.40071534611396 0.0152361884002446 3 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 3 + 81.929 0.0 0.0 7.512 7.512 82.344 0.0 0.0 0.0 25.495587109089044 1.297701834407846 1.297701834407846 1.297701834407846 0 0.8494850021680094 2.0 1.4559771852360797 0.0 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}K{I|L}EE{I|L};{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{I|L}E{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{I|L}G{M(Oxidation (M))|F}{I|L}E{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}GE{M(Oxidation (M))|F}{I|L}{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}G{M(Oxidation (M))|F}E{I|L}{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{I|L}[RV]M{I|L};{[TV]|[{I|L}S]}{I|L}GE{I|L}{M(Oxidation (M))|F}{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}G{M(Oxidation (M))|F}{I|L}{[TV]|[{I|L}S]}E{I|L};[{I|L}T]VG{M(Oxidation (M))|F}{I|L}E{I|L}S{I|L} 7.512;7.3931;6.9378;5.6743;5.4057;5.3474;4.9841;4.946;4.652;4.4758 -;+;-;-;-;-;-;-;-;- + 2792 + 1 2.215 113792.5 0.9300000071525574 15177 5988 21165 HBL1_DMSO_200M_050219_1,21167 HBL1_DMSO_200M_050219_1,21167,SLIFKLEEL True True SLIFKLEEL 104.58908 546.321704089642 1279690.5 21165.0 ENSG00000080189|ENST00000372230|SLC35C2;;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2 3.802605311075846 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21169 104.61 800.0 254800.0 25 0 33482.0 -1 0 118 872.4169676077984 1742.8193822823966 2 872.9180175662041 MULTI CID FTMS 0 0 0 21168 74507.0 0.6529173475807838 -5 0.0682220458984375 1 3 SV{I|L}PP[KT] 7 -1 17.445 0.0 0.0 1.0009 0.0 0.0 1002.3735947841528 0.0 1002.3735947841528 0.0 6.674807486262678 0.0 0.0 0 0.0 0.0 0.5796896906561032 0.0 SV{I|L}PP[KT] 1.0009 - 751 + 1 2.215 132481.7 0.3700000047683716 15178 5989 21168 HBL1_DMSO_200M_050219_1,21169 HBL1_DMSO_200M_050219_1,21169, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21170 104.62 800.0 20591.0 25 0 2270.3 -1 0 44 1072.785693347454 0 1072.785693347454 PEAK CID FTMS 0 0 0 -1 0 2 3 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.14457 0.0 0.0 1002.1385731189332 991.3017672174436 1993.440340336377 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.14457 - 2 + 1 2.215 22559.1 0.949999988079071 15179 5989 21168 HBL1_DMSO_200M_050219_1,21170 HBL1_DMSO_200M_050219_1,21170, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21174 104.64 354.0 190580.0 25 0 27762.0 + 22485 LPVPAFNVI 9 59 969.5768052672146 968.5695288006144 1 969.5800048708916 MULTI CID FTMS 0 0 0 21173 114411.7265625 0.0172455339078542 52 -0.6850814819335938 1 Unmodified _LPVPAFNVI_ ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000111674|P09104-2|ENO2 67.34385681178166 0.0221257235307089 3 [{I|L}P]VAP{M(Oxidation (M))|F}NV{I|L} 9 2 + 70.778 0.0 0.0 7.3075 7.3075 88.999 0.0 0.0 0.0 11.03174587664141 16.478174818886373 11.03174587664141 6.7609125905568135 0 1.1382104921644451 1.2218487496163564 0.0 0.7614393726401688 [{I|L}P]VAP{M(Oxidation (M))|F}NV{I|L};[{I|L}P]AVP{M(Oxidation (M))|F}NV{I|L};[{I|L}P]VAM{I|L}NV{I|L};[PA]{M(Oxidation (M))|F}NV{I|L}PV{I|L};[{I|L}P]A{M(Oxidation (M))|F}NVPV{I|L};[{I|L}P]AVM{I|L}NV{I|L};[{I|L}P]VAP{M(Oxidation (M))|F}GGV{I|L};[{I|L}P]A{M(Oxidation (M))|F}PVNV{I|L};[{I|L}P][PG]{I|L}{M(Oxidation (M))|F}NV{I|L};[{I|L}P]V{[ES]|[DT]|[{I|L}C]}VNV{I|L} 7.3075;6.6094;6.3878;6.1685;5.7187;5.6897;5.5706;5.5469;5.4769;5.2415 -;-;-;-;-;-;-;-;-;- 812 1 2.215 56705.1 1.0 15180 5992 21173 HBL1_DMSO_200M_050219_1,21174 HBL1_DMSO_200M_050219_1,21174,LPVPAFNVI True True LPVPAFNVI 104.63777 969.580004870892 89840746.0 21173.0 ENSG00000108515|ENST00000519602|ENO3;;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;;nc|ENSG00000111674|P09104-2|ENO2;;ENSG00000111674|ENST00000229277|ENO2;;ENSG00000074800|ENST00000234590|ENO1;;nc|ENSG00000108515|P13929-3|ENO3;;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;;nc|ENSG00000074800|P06733-2|ENO1 5.950615406036377 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21175 104.65 800.0 44461.0 25 0 763.26 -1 0 98 1169.302539050579 0 1169.302539050579 PEAK CID FTMS 0 0 0 -1 0 2 3 H 1 -1 3.9794 0.0 0.0 0.17031 0.0 0.0 1618.567223021277 577.9455050104124 2196.512728031689 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.17031 - 1 + 1 2.215 28926.0 0.4300000071525574 15181 5992 21173 HBL1_DMSO_200M_050219_1,21175 HBL1_DMSO_200M_050219_1,21175, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21178 104.67 800.0 163410.0 25 0 12194.0 + 36168 SVVGLAELYV 10 100 1049.5882733669723 1048.5809969003726 1 1049.588549792767 MULTI CID FTMS 0 0 0 21177 158369.8125 0.8824785783410409 2 -0.0813522338867187 1 Unmodified _SVVGLAELYV_ ENSG00000244045|ENST00000292114|TMEM199 92.4914307365334 0.009155046393728 3 [VS]VG{I|L}AE{I|L}YV 10 0 + 70.856 0.0 0.0 6.7574 6.7574 86.412 0.0 0.0 0.0 5.779550148593486 15.026975159433531 5.779550148593486 5.625145978905053 0 0.7302046884880937 0.0 3.274227503252014 0.0 + + [VS]VG{I|L}AE{I|L}YV;[VS]VAVAE{I|L}YV;[Q{I|L}]T{I|L}AE{I|L}YV;[VS]VG{I|L}AEY{I|L}V;[VS]VAVAEY{I|L}V;[Q{I|L}]T{I|L}AEY{I|L}V;[VS]VG{I|L}VDVYV;[VS]VAAVE{I|L}YV;[VS]VAAEV{I|L}YV;{[CP]|[EA]}{I|L}GVSV{I|L}YV 6.7574;6.2209;6.2062;6.0597;5.5233;5.5085;5.381;5.3482;5.0229;4.8836 +;-;-;-;-;-;-;-;-;- + 6712 1 2.215 86763.0 0.5899999737739563 15182 5994 21177 HBL1_DMSO_200M_050219_1,21178 HBL1_DMSO_200M_050219_1,21178,SVVGLAELYV True True SVVGLAELYV 104.67202 1049.58854979277 1263101.25 21177.0 ENSG00000244045|ENST00000292114|TMEM199 5.198407491048177 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21179 104.69 800.0 160040.0 25 0 46139.0 + 24865 MPMNVADLI 9 111 502.2509347702234 1002.4873166072468 2 502.2512695193291 MULTI CID FTMS 0 0 0 21177 146178.484375 0.2336096819655986 23 -0.2946395874023437 2 Unmodified _MPMNVADLI_ ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2 70.71552829651908 0.0208223590022201 3 {NN|[MP]|[D{I|L}]|[EV]}MNVAD{I|L}{I|L} 9 0 + 70.688 0.0 0.0 7.0512 7.0512 79.651 0.0 0.0 0.0 24.744237387763093 10.330145895351848 10.330145895351848 0.4845500650402812 0 0.7429928190999391 2.0 0.3494850021680094 1.3441876774005248 + + {NN|[MP]|[D{I|L}]|[EV]}MNVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVAMD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MGGVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVAD{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 7.0512;7.0029;6.9954;6.9787;6.4277;6.1327;6.0844;6.0769;6.0602;5.5984 +;-;-;-;-;-;-;-;-;- + 1060 1 2.215 102881.3 0.550000011920929 15183 5994 21177 HBL1_DMSO_200M_050219_1,21179 HBL1_DMSO_200M_050219_1,21179,MPMNVADLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21180 104.69 489.0 188460.0 25 0 15082.0 + 24250 MAPLALHLL 9 89 489.79388137292216 977.5732098126444 2 489.7939330935478 MULTI CID FTMS 0 0 0 21177 133673.828125 0.1814222319676782 29 -0.3406906127929687 3 Unmodified _MAPLALHLL_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1 56.04830969593885 0.0282699710924866 3 {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L} 9 0 + 58.158 0.0 0.0 5.9492 5.9492 82.673 0.0 0.0 0.0 25.76229158546596 11.42667503568731 11.42667503568731 4.503187623076954 0 0.5796896906561032 2.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L};{[DS]|[MA]|[CV]|TT}{I|L}PA{I|L}H{I|L}{I|L} 5.9492;5.4886 +;- + 300 + 1 2.215 74262.3 1.0 15184 5994 21177 HBL1_DMSO_200M_050219_1,21180 HBL1_DMSO_200M_050219_1,21180,MAPLALHLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21182 104.7 213.0 214400.0 25 0 20058.0 + 9570 FLIQHLPLV 9 69 540.3341676188796 1078.6537823045592 2 540.3342162966728 MULTI CID FTMS 0 0 0 21181 219584.015625 0.5846055883849769 21 -0.2517166137695312 1 Unmodified _FLIQHLPLV_ ENST00000424913.5_1_3:176771673-176816307:-|nuORF;ENST00000430069.5_1_3:176771676-176782752:-|nuORF 21.53697664764585 0.2571576504437394 3 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}V 9 4 + 43.905 0.0 0.0 4.0703 4.0703 52.716 0.0 0.0 0.0 0.0 9.335295873671754 0.0 0.0 0 0.9802046884880938 0.0 0.0 0.0 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}V;[HQ]{I|L}{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}V;[HQ]{I|L}{I|L}{I|L}{M(Oxidation (M))|F}P{I|L}V;[H{I|L}]Q{I|L}{I|L}{M(Oxidation (M))|F}P{I|L}V;[H{I|L}][AG]{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}V;[HQ]{I|L}{I|L}{M(Oxidation (M))|F}P{I|L}{I|L}V;[HQ]{I|L}{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}V;[H{I|L}]Q{I|L}{M(Oxidation (M))|F}P{I|L}{I|L}V;[H{I|L}]Q{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}V;[H{I|L}][AG]{I|L}{I|L}{M(Oxidation (M))|F}P{I|L}V 4.0703;4.0703;3.5122;3.5122;3.2167;3.0486;3.0486;3.0486;3.0486;2.6585 -;-;-;-;-;-;-;-;-;- 163 1 2.215 43979.2 1.0 15185 5995 21181 HBL1_DMSO_200M_050219_1,21182 HBL1_DMSO_200M_050219_1,21182,FLIQHLPLV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21183 104.72 800.0 209100.0 25 0 7959.9 + 14730 ILADEAFFSV 10 138 1111.5677332629618 1110.560456796362 1 1111.567797839642 MULTI CID FTMS 0 0 0 21181 94396.390625 0.4971293173179861 -10 0.1697311401367187 2 Unmodified _ILADEAFFSV_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 62.57269311338072 0.0298375429882549 3 {[DA]|[EG]}EA{I|L}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV 10 4 + 85.913 0.0 0.0 7.736 7.736 80.774 0.0 0.0 0.0 4.513026118047449 16.532125137753454 4.513026118047449 0.1230450566754797 0 0.6397727294836956 0.0 2.137900724135558 0.0 {[DA]|[EG]}EA{I|L}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV;{[DA]|[EG]}E{I|L}A{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV;{[DA]|[EG]}EA{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}SV;{[DA]|[EG]}E{I|L}A{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}SV;{[QN]|[E{I|L}]|[KN]}GEA{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV;{[DA]|[EG]}E{I|L}{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV;{[DA]|[EG]}{I|L}EA{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV;{[QN]|[E{I|L}]|[KN]}GEA{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}SV;{[DA]|[EG]}{I|L}EA{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}SV;{[DA]|[EG]}EA{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}SV 7.736;7.7249;7.6642;7.6532;7.3296;7.3068;7.2953;7.2579;7.2235;7.1578 -;-;-;-;-;-;-;-;-;- 16255 1 2.215 104572.2 0.4000000059604645 15186 5995 21181 HBL1_DMSO_200M_050219_1,21183 HBL1_DMSO_200M_050219_1,21183,ILADEAFFSV True True ILADEAFFSV 104.71625 1111.56779783964 1447773.375 21181.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 5.515232563018799 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21184 104.72 379.0 593870.0 25 0 42160.0 + 23485 LTIEDGIFEV 10 105 1135.588273923705 1134.580997457105 1 1135.588671863079 MULTI CID FTMS 0 0 0 21181 316539.21875 0.1514140360641246 -25 0.3308486938476562 3 Unmodified _LTIEDGIFEV_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 166.44778350782605 6.998372618209164e-07 3 [{I|L}T]{I|L}GDE{I|L}{M(Oxidation (M))|F}EV 10 2 + 91.099 0.0 0.0 8.0293 8.0293 84.323 0.0 0.0 0.0 5.849400390081058 15.026975159433531 5.849400390081058 1.822333069283644 0 1.363982988912431 1.6989700043360187 3.353917193908117 0.0 [{I|L}T]{I|L}GDE{I|L}{M(Oxidation (M))|F}EV;[{I|L}T]{I|L}GDE{I|L}E{M(Oxidation (M))|F}V;[{I|L}T]{I|L}EDG{I|L}{M(Oxidation (M))|F}EV;[{I|L}T]{I|L}EDG{I|L}E{M(Oxidation (M))|F}V;[{I|L}T]{I|L}GDE{M(Oxidation (M))|F}{I|L}EV;{[QN]|[E{I|L}]|[KN]}DGT{I|L}{I|L}{M(Oxidation (M))|F}EV;[{I|L}T][DG]{I|L}E{I|L}{M(Oxidation (M))|F}EV;[{I|L}T]E{I|L}DG{I|L}{M(Oxidation (M))|F}EV;{[QN]|[E{I|L}]|[KN]}DGT{I|L}{I|L}E{M(Oxidation (M))|F}V;[{I|L}T]{I|L}EDG{M(Oxidation (M))|F}{I|L}EV 8.0293;7.8687;7.8442;7.6836;7.5223;7.5138;7.426;7.395;7.3531;7.3372 -;-;+;-;-;-;-;-;-;- + 21152 1 2.215 137109.2 1.0 15187 5995 21181 HBL1_DMSO_200M_050219_1,21184 HBL1_DMSO_200M_050219_1,21184,LTIEDGIFEV True True LTIEDGIFEV 104.72311 1135.58867186308 39537450.5 21181.0 ENSG00000109971|ENST00000534624|HSPA8;;ENSG00000126803|ENST00000247207|HSPA2;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 6.666816075642903 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21185 104.74 800.0 242850.0 25 0 8602.5 + 3048 AVLEYLTAEI 10 107 1121.6094941553206 1120.6022176887209 1 1121.607470691204 MULTI CID FTMS 0 0 0 21181 241689.421875 1.0 0 0.0 4 Unmodified _AVLEYLTAEI_ ENSG00000113648|ENST00000511689|MACROH2A1;ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 99.79894945604345 0.0086314121850342 3 {[QN]|[E{I|L}]|[KN]}YAV{I|L}TAE{I|L} 10 4 + 98.464 0.0 0.0 8.7867 8.7867 88.934 0.0 0.0 0.0 9.030899869919423 16.532125137753425 9.030899869919423 4.247425010840047 0 0.5010912013506126 1.3979400086720375 2.133803120088516 0.0 {[QN]|[E{I|L}]|[KN]}YAV{I|L}TAE{I|L};{[QN]|[E{I|L}]|[KN]}YAVT{I|L}AE{I|L};{[QN]|[E{I|L}]|[KN]}VAY{I|L}TAE{I|L};{[QN]|[E{I|L}]|[KN]}YA{I|L}VTAE{I|L};{[QN]|[E{I|L}]|[KN]}VAYT{I|L}AE{I|L};{[QN]|[E{I|L}]|[KN]}YA{I|L}TVAE{I|L};[Y{I|L}]EAV{I|L}TAE{I|L};{[QN]|[E{I|L}]|[KN]}YAV{I|L}TEA{I|L};{[QN]|[E{I|L}]|[KN]}YAT{I|L}VAE{I|L};{[QN]|[E{I|L}]|[KN]}YAVTA{I|L}E{I|L} 8.7867;8.4077;8.3821;8.0709;8.0031;7.9849;7.9808;7.9262;7.871;7.8233 -;-;-;-;-;-;-;-;-;- 51839 1 2.215 118510.2 0.6700000166893005 15188 5995 21181 HBL1_DMSO_200M_050219_1,21185 HBL1_DMSO_200M_050219_1,21185,AVLEYLTAEI True True AVLEYLTAEI 104.73697 1121.6074706912 1510891.375 21181.0 ENSG00000196747|ENST00000358739|H2AC13;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000276903|ENST00000613174|H2AC16;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000274997|ENST00000377459|H2AC12;;nc|ENSG00000113648|O75367-3|MACROH2A1;;ENSG00000184270|ENST00000331128|H2AC21;;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;;ENSG00000113648|ENST00000511689|MACROH2A1;;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;;ENSG00000180573|ENST00000377791|H2AC6;;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;;nc|ENSG00000246705|Q9BTM1-2|H2AJ;;nc|ENSG00000113648|O75367|MACROH2A1;;ENSG00000246705|ENST00000544848|H2AJ 1.6261662418643634 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21187 104.75 327.0 451770.0 25 0 91322.0 + 32445 SAFATPFLV 9 96 952.514079723186 951.506803256586 1 952.5142700076104 MULTI CID FTMS 0 0 0 21186 272643.4375 0.3747464919502818 -9 0.2040863037109375 1 Unmodified _SAFATPFLV_ ENSG00000127184|ENST00000247655|COX7C;ENST00000511472.5_1_5:85913768-85915283:+|nuORF 117.59872219059416 0.0024691254995583 3 {[MS]|[{M(Oxidation (M))|F}A]}SATP{M(Oxidation (M))|F}{I|L}V 9 2 + 69.382 0.0 0.0 7.2918 7.2918 81.701 0.0 0.0 0.0 1.2628749457997657 13.601292910313347 1.2628749457997657 1.2628749457997657 0 1.774227503252014 0.0 2.4049471895720984 0.0 {[MS]|[{M(Oxidation (M))|F}A]}SATP{M(Oxidation (M))|F}{I|L}V;[TA]{M(Oxidation (M))|F}GTP{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}TGTP{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}SATP{I|L}{M(Oxidation (M))|F}V;[TA]{M(Oxidation (M))|F}GTP{I|L}{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGT[YV]{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}TGTP{I|L}{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSA[YV]{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS[VS]{M(Oxidation (M))|F}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TSAA{M(Oxidation (M))|F}{I|L}V 7.2918;7.159;6.8427;6.2186;6.0859;5.7837;5.7695;5.6524;5.527;5.492 -;-;-;-;-;-;-;-;-;- 3827 1 2.215 100420.0 1.0 15189 5996 21186 HBL1_DMSO_200M_050219_1,21187 HBL1_DMSO_200M_050219_1,21187,SAFATPFLV True True SAFATPFLV 104.74547 952.51427000761 6213676.0 21186.0 ENSG00000127184|ENST00000247655|COX7C;;ENST00000511472.5_1_5:85913768-85915283:+|nuORF 5.962626775105794 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21188 104.75 268.0 260190.0 25 0 21914.0 -1 0 69 978.4990209030332 0 978.501513659954 PEAK CID FTMS 0 0 0 21186 216411.390625 0.737763327311339 4 -0.049102783203125 2 3 {I|L}{I|L}CMS 5 -1 27.51 0.0 0.0 1.4072 0.0 0.0 1197.6150329175914 207.11409937076408 1404.7291322883557 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4489700043360187 0.0 {I|L}{I|L}CMS 1.4072 - 322 + 1 2.215 54986.3 1.0 15190 5996 21186 HBL1_DMSO_200M_050219_1,21188 HBL1_DMSO_200M_050219_1,21188, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21189 104.76 800.0 90494.0 25 0 9280.5 + 23487 LTIEDGIFEV 10 104 568.2979366939068 1134.5813204546134 2 568.2977172732353 MULTI CID FTMS 0 0 0 21186 99155.8515625 0.1803733481816497 -32 0.4185714721679687 3 Unmodified _LTIEDGIFEV_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 61.357469665136826 0.0330252915653943 3 [{I|L}T][DG]{I|L}E{I|L} 7 4 36.436 0.0 0.0 3.2114 0.0 0.0 0.0 390.1663173630697 390.1663173630697 7.064404002582023 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 2.1989700043360187 0.0 [{I|L}T][DG]{I|L}E{I|L} 3.2114 - 1386 1 2.215 62538.7 0.3600000143051147 15191 5996 21186 HBL1_DMSO_200M_050219_1,21189 HBL1_DMSO_200M_050219_1,21189,LTIEDGIFEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21191 104.78 567.0 318790.0 25 0 33202.0 + 15331 IPLPLGTVTI 10 136 512.3261868174338 1022.6378207016676 2 512.3262817263603 MULTI CID FTMS 0 0 0 21190 276878.53125 0.4777566666425814 22 -0.1994247436523437 1 Unmodified _IPLPLGTVTI_ ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1 117.59872219059416 0.0008035695626254 3 [{I|L}P]GT{I|L}P{I|L}VT{I|L} 10 4 + 89.433 0.0 0.0 8.7453 8.7453 87.673 0.0 0.0 0.0 19.719712763997578 15.026975159433531 15.026975159433531 3.226124605055105 0 1.1643943297944483 1.6989700043360187 2.7134679910804405 0.0 [{I|L}P]GT{I|L}P{I|L}VT{I|L};[{I|L}P]{I|L}PGT{I|L}VT{I|L};[{I|L}P]GTV{I|L}P{I|L}T{I|L};[{I|L}P]P{I|L}GT{I|L}VT{I|L};[{I|L}P]GT{I|L}PV{I|L}T{I|L};[{I|L}P]{I|L}PG{I|L}TVT{I|L};[{I|L}P]{I|L}P{I|L}GTVT{I|L};[{I|L}P]{I|L}PGTV{I|L}T{I|L};[{I|L}P]GT{I|L}VP{I|L}T{I|L};[{I|L}P]P{I|L}G{I|L}TVT{I|L} 8.7453;8.4298;8.208;8.0395;8.0052;7.9409;7.8187;7.6897;7.6415;7.5506 -;-;-;-;-;-;+;-;-;- + 3173 1 2.232 142989.5 1.0 15192 5997 21190 HBL1_DMSO_200M_050219_1,21191 HBL1_DMSO_200M_050219_1,21191,IPLPLGTVTI True True IPLPLGTVTI 104.77812 512.32628172636 26745890.0 21190.0 ENST00000472488.5_1_1:160085570-160106822:+|nuORF;;ENSG00000163399|ENST00000295598|ATP1A1;;nc|ENSG00000163399|P05023-4|ATP1A1;;ENSG00000018625|ENST00000361216|ATP1A2;;nc|ENSG00000163399|P05023-3|ATP1A1 4.426580508550008 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21196 104.8 568.0 93278.0 25 0 6625.5 + 1682 ALPEILFAKV 10 77 550.8392627010351 1099.66397246887 2 550.8394042849541 MULTI CID FTMS 0 0 0 21195 85650.6015625 0.2196378525165578 -28 0.3854293823242187 1 Unmodified _ALPEILFAKV_ ENSG00000160683|ENST00000292174|CXCR5;nc|ENSG00000160683|P32302-2|CXCR5 26.268140514670165 0.3785003716575977 3 [EP]{I|L}{I|L}{M(Oxidation (M))|F}AW 7 4 44.979 0.0 0.0 4.0902 0.0 0.0 0.0 240.2061226976388 240.2061226976388 -1.6643179179862244 0.0 -1.6643179179862244 0.0 0 0.0 1.3010299956639813 0.3252574989159953 0.0 [EP]{I|L}{I|L}{M(Oxidation (M))|F}AW 4.0902 - 154 1 2.232 50041.4 1.0 15193 6001 21195 HBL1_DMSO_200M_050219_1,21196 HBL1_DMSO_200M_050219_1,21196,ALPEILFAKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21199 104.82 800.0 96565.0 25 0 1507.1 -1 0 108 1128.4706684405382 0 1128.120776355267 PEAK CID FTMS 0 0 0 21198 37966.67578125 1.0 0 0.0 1 3 G{I|L} 2 -1 6.4537 0.0 0.0 0.2862 0.0 0.0 1271.2322171527578 810.5452974908811 2081.777514643639 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L} 0.2862 - 19 + 1 2.232 47336.5 0.7599999904632568 15194 6003 21198 HBL1_DMSO_200M_050219_1,21199 HBL1_DMSO_200M_050219_1,21199, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21200 104.84 800.0 50305.0 25 0 923.79 -1 0 88 867.6224243044853 0 867.6224243044853 PEAK CID FTMS 0 0 0 -1 0 2 3 A 1 -1 5.4846 0.0 0.0 0.31644 0.0 0.0 666.2236561267456 992.9475802057248 1659.1712363324705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.31644 - 13 + 1 2.232 34223.8 0.3199999928474426 15195 6003 21198 HBL1_DMSO_200M_050219_1,21200 HBL1_DMSO_200M_050219_1,21200, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21203 104.85 504.0 128740.0 25 0 27300.0 -1 0 85 872.6679260069081 3486.6425981612324 4 872.9182006716728 MULTI CID FTMS 0 0 0 21202 59046.53515625 0.732751992077934 1 -0.0158615112304687 1 3 [YQ]{I|L} 3 -1 16.254 0.0 0.0 0.46619 0.0 0.0 0.0 3079.413082565665 3079.413082565665 3.146263720283361 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 [YQ]{I|L} 0.46619 - 164 1 2.232 54115.8 1.0 15196 6005 21202 HBL1_DMSO_200M_050219_1,21203 HBL1_DMSO_200M_050219_1,21203, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21204 104.86 233.0 183900.0 25 0 18389.0 + 24866 MPMNVADLI 9 48 1003.4941488170624 1002.4868723504624 1 1003.495593249798 MULTI CID FTMS 0 0 0 21202 145555.140625 0.1148614367628447 39 -0.4732513427734375 2 Unmodified _MPMNVADLI_ ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2 64.23631603340823 0.0237365939569086 3 {NN|[MP]|[D{I|L}]|[EV]}MNVAD{I|L}{I|L} 9 0 + 71.947 0.0 0.0 7.1769 7.1769 79.522 0.0 0.0 0.0 4.762036441594191 38.93938964343363 4.762036441594191 0.2422750325201406 0 0.3252574989159953 0.0 0.0 1.885151878060192 + + {NN|[MP]|[D{I|L}]|[EV]}MNVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MNVAPM{I|L};{NN|[MP]|[D{I|L}]|[EV]}NMVAPM{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MGGVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVMAPM{I|L};{[NV]|[RG]}MPMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MGGVAPM{I|L} 7.1769;7.1527;6.9077;6.8836;6.4726;6.2583;6.2342;6.2035;6.1724;5.9892 +;-;-;-;-;-;-;-;-;- + 523 1 2.232 38744.6 1.0 15197 6005 21202 HBL1_DMSO_200M_050219_1,21204 HBL1_DMSO_200M_050219_1,21204,MPMNVADLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21207 104.88 800.0 117510.0 25 0 17492.0 + 34045 SLLDALSLFL 10 103 546.3217143581778 1090.6288757831555 2 546.3217040896416 MULTI CID FTMS 0 0 0 21206 82226.7109375 0.4430534065925554 12 -0.103179931640625 1 Unmodified _SLLDALSLFL_ REV__ENSG00000180758|ENST00000377411|GPR157 30.63653989081413 0.2803493085145199 3 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 -1 + 77.879 0.0 0.0 7.1408 7.1408 85.33 0.0 0.0 0.0 33.7101498947667 7.00073708740895 7.00073708740895 3.776362525516532 0 0.8494850021680094 2.0 0.75 0.0 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{I|L}E{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{I|L}[R{M(Oxidation (M))|F}][VP];{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[R{I|L}][VP];{[TV]|[{I|L}S]}{I|L}G{M(Oxidation (M))|F}RR{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}{I|L}[KC][RK]M{I|L};{[TV]|[{I|L}S]}{I|L}[KC][RK]P{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{I|L}[KC][RK]{I|L}M;[{I|L}T]VG{M(Oxidation (M))|F}RR{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}{I|L}[KA]{[QD]|[EN]|[WG]|[KD]|[RS]} 7.1408;6.7945;3.8589;3.6555;3.5583;3.1923;2.4788;2.4788;2.1686;2.0425 -;-;-;-;-;-;-;-;-;- 1172 + 1 2.232 75790.8 0.7599999904632568 15198 6007 21206 HBL1_DMSO_200M_050219_1,21207 HBL1_DMSO_200M_050219_1,21207,SLLDALSLFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21208 104.89 800.0 78478.0 25 0 16782.0 + 3478 CGQLGDPCLLV 11 93 559.2724020410333 1116.5302511488665 2 559.2723266482353 MULTI CID FTMS 0 0 0 21206 88700.5 0.9286541975978438 -21 0.3317337036132812 2 Unmodified _CGQLGDPCLLV_ REV__CON__ENSEMBL:ENSBTAP00000034412 20.41453444215458 0.6105011870913812 3 V{[DA]|[EG]}V{I|L}{I|L}V 7 -1 27.864 0.0 0.0 2.4956 0.0 0.0 389.08235366035314 0.0 389.08235366035314 0.0 12.379468583205806 0.0 0.0 0 0.5738194166937225 0.0 0.6139829889124311 0.0 V{[DA]|[EG]}V{I|L}{I|L}V 2.4956 - 172 1 2.232 54568.7 0.3400000035762787 15199 6007 21206 HBL1_DMSO_200M_050219_1,21208 HBL1_DMSO_200M_050219_1,21208,CGQLGDPCLLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21214 104.92 629.0 33083.0 25 0 1468.4 + 17380 KMFLAERQV 9 45 1121.6110237187393 1120.603747252139 1 1122.838183581829 MULTI CID FTMS 0 0 0 21213 43336.25 1.0 0 0.0 1 Unmodified _KMFLAERQV_ REV__ENSG00000089847|ENST00000318934|ANKRD24;REV__nc|ENSG00000089847|Q8TF21-2|ANKRD24 10.073929032068715 0.563993802247229 3 {[QN]|[E{I|L}]|[KN]}Y[KG]TA{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 10 -1 + 23.364 0.0 0.0 2.0849 2.0849 67.298 0.0 0.0 0.0 5.764837301042714 8.670912423450403 5.764837301042714 1.0083376013968604 0 0.0 0.0 0.75 0.0 {[QN]|[E{I|L}]|[KN]}Y[KG]TA{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}Y[KG]TAV[Q{I|L}];{[QN]|[E{I|L}]|[KN]}Y[KG]VPG{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}YA[KS]A{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}YA[KS]AV[Q{I|L}];{[QN]|[E{I|L}]|[KN]}Y[KG]VW{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}Y[RK]PG{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}Y[RK]W{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}YAVK[TA]{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}YAVK{[SA]|[TG]}[Q{I|L}] 2.0849;1.9949;1.9529;1.8163;1.7263;1.6375;1.37;1.0594;0.90229;0.81231 -;-;-;-;-;-;-;-;-;- 385 1 2.232 25089.3 1.0 15200 6012 21213 HBL1_DMSO_200M_050219_1,21214 HBL1_DMSO_200M_050219_1,21214,KMFLAERQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21215 104.93 800.0 106220.0 25 0 23077.0 35705 SVGIVIVSLL 10 100 500.3261260195247 998.6376991058494 2 500.3259460330009 MULTI CID FTMS 0 0 0 21213 87277.9609375 0.6691129660616013 -8 0.0700302124023437 2 Unmodified _SVGIVIVSLL_ ENST00000396953.6_2_3:12882746-12883025:-|nuORF 43.85829265575387 0.1168243637355526 3 [VS]VA{I|L}V[VS]{I|L}{I|L} 10 3 + 60.288 0.0 0.0 6.037 6.037 80.465 0.0 0.0 0.0 2.984301868398504 1.1662802732291766 1.1662802732291766 2.984301868398504 0 1.548455006504028 2.0 1.0189301784845295 0.0 [VS]VA{I|L}V[VS]{I|L}{I|L};[VS]VD{I|L}[K{I|L}]{I|L}{I|L};[VS]VAV{I|L}[VS]{I|L}{I|L};[VS]VA{I|L}{I|L}[TA]{I|L}{I|L};[K{I|L}]{I|L}DV[VS]{I|L}{I|L};[DV]{I|L}K{I|L}[VS]{I|L}{I|L};[K{I|L}]D{I|L}V[VS]{I|L}{I|L};[{I|L}T]AA{I|L}V[VS]{I|L}{I|L};{I|L}{I|L}KDV[VS]{I|L}{I|L};[K{I|L}]{I|L}D{I|L}[TA]{I|L}{I|L} 6.037;5.7382;5.2093;5.0529;3.6723;3.6415;3.3585;2.7923;2.7167;2.6882 -;-;-;-;-;-;-;-;-;- 667 1 2.232 70101.3 0.3300000131130218 15201 6012 21213 HBL1_DMSO_200M_050219_1,21215 HBL1_DMSO_200M_050219_1,21215,SVGIVIVSLL True True SVVDIKLLL 104.93418 500.325946033001 2099530.75 21213.0 ENST00000478085.5_1_22:40800171-40802852:+|nuORF;;ENSG00000100359|ENST00000248929|SGSM3;;nc|ENSG00000100359|Q96HU1-2|SGSM3 2.276121457417806 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21221 104.96 380.0 247060.0 25 0 8515.4 + 10563 FVIDGFDEL 9 98 1054.509091927185 1053.501815460585 1 1056.514208972454 MULTI CID FTMS 0 0 0 21220 207093.0 0.4233174603083349 22 -0.2713623046875 1 Unmodified _FVIDGFDEL_ ENSG00000022556|ENST00000448584|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;nc|ENSG00000022556|Q9NX02-2|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2 18.13498045792455 0.3457906370836843 3 {M(Oxidation (M))|F}EDKP 5 7 24.469 0.0 0.0 2.3226 0.0 0.0 419.18868624112025 0.0 419.18868624112025 0.0 8.573324964312688 0.0 0.0 0 0.2302046884880938 0.0 0.2614393726401688 0.0 {M(Oxidation (M))|F}EDKP 2.3226 - 1723 1 2.232 67883.4 1.0 15202 6017 21220 HBL1_DMSO_200M_050219_1,21221 HBL1_DMSO_200M_050219_1,21221,FVIDGFDEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21225 104.98 677.0 178420.0 25 0 13813.0 + -1 VPLEMLEI 8 108 943.5196189605008 0 943.5185424685478 PEAK CID FTMS 0 0 0 21224 100111.59375 0.3389690068465248 25 -0.3501510620117187 1 ENSG00000112742|ENST00000369798|TTK;ENST00000430061.2_1_6:80715671-80721208:+|nuORF;nc|ENSG00000112742|P33981-2|TTK 3 {I|L}E{I|L}MVE 6 -1 32.652 0.0 0.0 1.7322 0.0 0.0 960.5227451458078 207.11472498111564 1167.6374701269235 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E{I|L}MVE 1.7322 - 7174 + 1 2.232 82564.0 1.0 15203 6020 21224 HBL1_DMSO_200M_050219_1,21225 HBL1_DMSO_200M_050219_1,21225, False False VPLEMLEI 104.98212 943.518542468548 2893036.5 21224.0 ENSG00000112742|ENST00000369798|TTK;;ENST00000430061.2_1_6:80715671-80721208:+|nuORF;;nc|ENSG00000112742|P33981-2|TTK 1.997925539811452 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21226 104.99 337.0 303840.0 25 0 29466.0 + 10079 FPSEDILLV 9 76 1032.5611704520422 1031.5538939854423 1 1032.560595691204 MULTI CID FTMS 0 0 0 21224 209829.78125 0.9036988575355468 1 -0.0204696655273437 2 Unmodified _FPSEDILLV_ ENSG00000121350|ENST00000240651|PYROXD1 85.35673624503755 0.0162188719545379 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SED{I|L}{I|L}{I|L}V 9 0 + 79.703 0.0 0.0 7.7265 7.7265 94.089 0.0 0.0 0.0 17.689549981487076 35.94335023848103 17.689549981487076 11.588709367037282 0 0.0 2.0 1.8098943791441968 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SED{I|L}{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SED{I|L}{I|L}V{I|L};{I|L}{I|L}DESM{I|L}{I|L}V;{I|L}{I|L}DESP{M(Oxidation (M))|F}{I|L}V;{I|L}{I|L}DESP{I|L}{M(Oxidation (M))|F}V;{I|L}{I|L}DESM{I|L}V{I|L};{I|L}{I|L}D{I|L}TDM{I|L}V;{I|L}{I|L}DES{I|L}M{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[HA][YV]{I|L}V;{I|L}{I|L}DESP{M(Oxidation (M))|F}V{I|L} 7.7265;6.6031;4.5584;4.0958;3.5744;3.4349;3.3133;3.2945;2.9948;2.9724 +;-;-;-;-;-;-;-;-;- + 983 1 2.232 71981.1 1.0 15204 6020 21224 HBL1_DMSO_200M_050219_1,21226 HBL1_DMSO_200M_050219_1,21226,FPSEDILLV True True FPSEDILLV 104.98827 1032.5605956912 11127255.0 21224.0 ENSG00000121350|ENST00000240651|PYROXD1 5.021731535593669 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21230 105.0 108.0 377070.0 25 0 44177.0 + 23488 LTIEDGIFEV 10 75 568.2979366939068 1134.5813204546134 2 568.2977783083916 MULTI CID FTMS 0 0 0 21229 327113.1875 0.5950480978579087 -5 0.0366363525390625 1 Unmodified _LTIEDGIFEV_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 32.30548876998284 0.2428506522065767 3 {NN|[MP]|[D{I|L}]|[EV]}GT{I|L}E{I|L} 7 6 33.522 0.0 0.0 2.9546 0.0 0.0 0.0 390.16662253885096 390.16662253885096 9.889013155985538 0.0 0.0 0.0 0 0.0 0.0 1.8494850021680087 0.0 {NN|[MP]|[D{I|L}]|[EV]}GT{I|L}E{I|L} 2.9546 - 195 1 2.232 34885.5 1.0 15205 6023 21229 HBL1_DMSO_200M_050219_1,21230 HBL1_DMSO_200M_050219_1,21230,LTIEDGIFEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21236 105.03 385.0 71314.0 25 0 2817.2 -1 0 75 1041.003100574017 0 1041.003100574017 PEAK CID FTMS 0 0 0 -1 0 1 3 E 1 -1 5.4846 0.0 0.0 0.26368 0.0 0.0 1709.8054127185435 238.1203249567016 1947.925737675245 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.26368 - 3 + 1 2.232 27447.4 1.0 15206 6028 21235 HBL1_DMSO_200M_050219_1,21236 HBL1_DMSO_200M_050219_1,21236, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21237 105.04 595.0 34193.0 25 0 17908.0 -1 0 30 902.1644775271416 0 902.1644775271416 PEAK CID FTMS 0 0 0 -1 0 2 3 D 1 -1 5.4846 0.0 0.0 0.30431 0.0 0.0 538.4450916736206 1145.8037813776002 1684.248873051221 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.30431 - 1 + 1 2.232 26524.1 1.0 15207 6028 21235 HBL1_DMSO_200M_050219_1,21237 HBL1_DMSO_200M_050219_1,21237, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21238 105.04 209.0 50865.0 25 0 5307.4 -1 0 28 931.3515502810478 0 931.3515502810478 PEAK CID FTMS 0 0 0 -1 0 3 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.232 15321.7 1.0 15208 6028 21235 HBL1_DMSO_200M_050219_1,21238 HBL1_DMSO_200M_050219_1,21238, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21239 105.05 480.0 106580.0 25 0 13585.0 + 15332 IPLPLGTVTI 10 76 512.3261868174338 1022.6378207016676 2 512.3265869021416 MULTI CID FTMS 0 0 0 21235 117891.1796875 0.2034224061352232 53 -0.7369308471679688 4 Unmodified _IPLPLGTVTI_ ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1 60.38955033654506 0.0355643171799535 3 [{I|L}P]GTV{I|L}P{I|L}T{I|L} 10 6 + 62.718 0.0 0.0 6.133 6.133 89.275 0.0 0.0 0.0 16.70941280735775 8.947340481202062 8.947340481202062 10.440680443502757 0 0.8182503180159344 1.5228787452803376 1.8494850021680087 0.0 [{I|L}P]GTV{I|L}P{I|L}T{I|L};[{I|L}P]{I|L}PGT{I|L}VT{I|L};[{I|L}P]{I|L}PGTV{I|L}T{I|L};[{I|L}P]GT[{I|L}P]{I|L}VT{I|L};[{I|L}P]GT[{I|L}P]V{I|L}T{I|L};[{I|L}P]{I|L}[SG]{I|L}P{I|L}T{I|L};[{I|L}T][PG]V{I|L}P{I|L}T{I|L};[{I|L}P]{I|L}P{I|L}{[SA]|[TG]}VT{I|L};[{I|L}P]{I|L}P{I|L}[SG]{I|L}T{I|L};[{I|L}P]G[{I|L}P]T{I|L}VT{I|L} 6.133;5.112;4.9163;4.8882;4.6924;4.5714;4.499;4.3519;4.1561;4.0394 -;-;-;-;-;-;-;+;-;- + 351 1 2.232 45085.2 1.0 15209 6028 21235 HBL1_DMSO_200M_050219_1,21239 HBL1_DMSO_200M_050219_1,21239,IPLPLGTVTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21240 105.06 379.0 9291.4 25 0 1269.2 -1 0 9 1113.231127917767 0 1113.231127917767 PEAK CID FTMS 0 0 0 -1 0 5 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.232 14239.6 1.0 15210 6028 21235 HBL1_DMSO_200M_050219_1,21240 HBL1_DMSO_200M_050219_1,21240, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21241 105.07 431.0 110610.0 25 0 9732.5 + 27390 PIGVTLVL 8 72 811.5283442966548 810.5210678300548 1 811.5287353396416 MULTI CID FTMS 0 0 0 21235 104019.03125 0.9310293733155188 9 -0.1720199584960937 6 Unmodified _PIGVTLVL_ REV__ENST00000552141.5_1_12:49495806-49497560:-|nuORF 63.393752934501535 0.1160198504584336 3 [{I|L}P]GTV{I|L}V{I|L} 8 -1 + 74.09 0.0 0.0 9.1411 9.1411 95.772 0.0 0.0 0.0 17.614393726401687 60.90288749933073 17.614393726401687 10.796896906561033 0 0.3807196863200844 1.3010299956639813 1.5669015600442575 0.0 [{I|L}P]GTV{I|L}V{I|L};[{I|L}P]VGT{I|L}V{I|L};[{I|L}P]GVT{I|L}V{I|L};[{I|L}P]KE{I|L}V{I|L};[{I|L}P]GT{I|L}VV{I|L};[{I|L}P]K{I|L}EV{I|L};[{I|L}P]V{I|L}{[SA]|[TG]}V{I|L};[{I|L}P]V[TA]VV{I|L};[{I|L}P][{I|L}A]SVV{I|L};[{I|L}P]V{I|L}VGT{I|L} 9.1411;7.809;7.809;7.5091;7.494;5.9968;5.2996;5.0823;4.5568;4.3428 -;-;+;-;-;-;-;-;-;- + 216 1 2.232 42046.3 1.0 15211 6028 21235 HBL1_DMSO_200M_050219_1,21241 HBL1_DMSO_200M_050219_1,21241,PIGVTLVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21242 105.07 492.0 27794.0 25 0 1965.2 -1 0 40 817.2239868044853 0 817.2239868044853 PEAK CID FTMS 0 0 0 -1 0 7 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.232 15544.3 1.0 15212 6028 21235 HBL1_DMSO_200M_050219_1,21242 HBL1_DMSO_200M_050219_1,21242, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21243 105.08 88.0 57000.0 25 0 4958.8 -1 0 19 895.0202514529228 0 895.0202514529228 PEAK CID FTMS 0 0 0 -1 0 8 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.232 16160.6 1.0 15213 6028 21235 HBL1_DMSO_200M_050219_1,21243 HBL1_DMSO_200M_050219_1,21243, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21245 105.08 144.0 479600.0 25 0 43363.0 + 1683 ALPEILFAKV 10 77 550.8392627010351 1099.66397246887 2 550.8394653201103 MULTI CID FTMS 0 0 0 21244 389962.84375 1.0 0 0.0 1 Unmodified _ALPEILFAKV_ ENSG00000160683|ENST00000292174|CXCR5;nc|ENSG00000160683|P32302-2|CXCR5 31.26834338654808 0.266153677697784 3 [{I|L}A]PE{I|L}{I|L}{M(Oxidation (M))|F}AKV 10 0 + 63.293 0.0 0.0 5.7557 5.7557 91.402 0.0 0.0 0.0 14.832756192022607 10.935237930322051 10.935237930322051 63.29300089260763 0 0.3252574989159953 1.6989700043360187 0.0 0.2396518287104437 + + [{I|L}A]PE{I|L}{I|L}{M(Oxidation (M))|F}AKV 5.7557 + + 257 + 1 2.232 60992.7 1.0 15214 6029 21244 HBL1_DMSO_200M_050219_1,21245 HBL1_DMSO_200M_050219_1,21245,ALPEILFAKV False True ALPEILFAKV 105.08366 550.83946532011 8038487.5 21244.0 nc|ENSG00000160683|P32302-2|CXCR5;;ENSG00000160683|ENST00000292174|CXCR5 7.431794166564941 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21246 105.1 800.0 7040.7 25 0 998.81 -1 0 18 803.7327758669853 0 803.7327758669853 PEAK CID FTMS 0 0 0 -1 0 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.232 14228.9 0.3799999952316284 15215 6029 21244 HBL1_DMSO_200M_050219_1,21246 HBL1_DMSO_200M_050219_1,21246, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21247 105.1 212.0 472330.0 25 0 65887.0 + 44281 YLLPAIVHI 9 75 519.8210361753863 1037.6275194175726 2 519.8209716677666 MULTI CID FTMS 0 0 0 21244 227253.453125 0.1009132916549639 -15 0.1386566162109375 3 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 45.7499826716795 0.0496882803020414 3 [Y{I|L}]{I|L}PA{I|L}V{I|L}H 9 2 + 61.415 0.0 0.0 5.9188 5.9188 89.555 0.0 0.0 0.0 22.910590695743792 9.710536658395128 9.710536658395128 13.979400086720377 0 0.7134679910804405 2.0 0.0 0.0 [Y{I|L}]{I|L}PA{I|L}V{I|L}H;[Y{I|L}]{I|L}{I|L}[PA]V{I|L}H;[PA]{I|L}VH{I|L}{I|L}[Y{I|L}];[PA]{I|L}V{I|L}H{I|L}[Y{I|L}];[H{I|L}]VAP{I|L}{I|L}[Y{I|L}];[PA]{I|L}{I|L}VH{I|L}[Y{I|L}];[HV]{I|L}AP{I|L}{I|L}[Y{I|L}] 5.9188;4.5715;3.2392;2.5656;2.5385;1.9853;1.5459 -;-;-;-;-;-;- 227 + 1 2.232 81887.4 1.0 15216 6029 21244 HBL1_DMSO_200M_050219_1,21247 HBL1_DMSO_200M_050219_1,21247,YLLPAIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21252 105.12 376.0 199290.0 25 0 33015.0 + 12568 GVIDLIFEKA 10 92 552.8186602366919 1103.6227675401838 2 552.8187744021416 MULTI CID FTMS 0 0 0 21251 138872.9375 0.1536544685658189 -12 0.1252899169921875 1 Unmodified _GVIDLIFEKA_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 65.47368725323818 0.0222277162070287 3 [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA] 10 0 + 92.833 0.0 0.0 8.4117 8.4117 94.771 0.0 0.0 0.0 55.38615279822949 10.522562268522575 10.522562268522575 10.178030790940866 0 1.548455006504028 2.0 1.0451140161145327 0.3252574989159953 + + [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA];[VG]{I|L}D{I|L}{M(Oxidation (M))|F}{I|L}E[KA];[VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}{[QS]|[NT]}{I|L};[VG]{I|L}D{I|L}{M(Oxidation (M))|F}{I|L}{[QS]|[NT]}{I|L} 8.4117;7.4895;7.0513;6.1291 +;-;-;- + 623 + 1 2.232 61151.6 1.0 15217 6033 21251 HBL1_DMSO_200M_050219_1,21252 HBL1_DMSO_200M_050219_1,21252,GVIDLIFEKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21253 105.14 800.0 73513.0 25 0 8343.9 + 34935 SQISNIDLLNL 11 92 615.3407179194581 1228.6668829057162 2 615.3405029177666 MULTI CID FTMS 0 0 0 21251 85638.390625 0.9262425679811508 -5 0.0968856811523437 2 Unmodified _SQISNIDLLNL_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B 87.25819977447905 0.0022587470437062 3 {[QV]|[N{I|L}]|[RA]|[KV]}TSN{I|L}D{I|L} 8 5 64.766 0.0 0.0 5.2712 0.0 0.0 0.0 355.201501381278 355.201501381278 15.70107520596089 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.5941876774005248 1.4489700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}TSN{I|L}D{I|L} 5.2712 - 4094 1 2.232 48832.2 0.3300000131130218 15218 6033 21251 HBL1_DMSO_200M_050219_1,21253 HBL1_DMSO_200M_050219_1,21253,SQISNIDLLNL True True SQISNIDLLNL 105.1367 615.340502917767 724212.0625 21251.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 4.893063227335612 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21254 105.15 800.0 66583.0 25 0 7689.3 -1 0 84 872.6687292447866 3486.6458111127463 4 872.9186279177666 MULTI CID FTMS 0 0 0 21251 77735.53125 1.0 0 0.0 3 3 H{I|L}[C(Carbamidomethyl (C))N] 4 -1 16.198 0.0 0.0 0.46457 0.0 0.0 2944.3753973526973 0.0 2944.3753973526973 0.0 4.943415770716156 0.0 0.0 0 0.0 0.0 0.0 0.0 H{I|L}[C(Carbamidomethyl (C))N] 0.46457 - 165 1 2.232 49394.0 0.3300000131130218 15219 6033 21251 HBL1_DMSO_200M_050219_1,21254 HBL1_DMSO_200M_050219_1,21254, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21257 105.17 800.0 119870.0 25 0 12233.0 + 18760 LAMELLLR 8 74 479.791395495078 957.568238056956 2 479.7915222048759 MULTI CID FTMS 0 0 0 21256 122639.7890625 0.2374653791027952 -11 0.153472900390625 1 Unmodified _LAMELLLR_ REV__ENST00000521033.5_1_5:160061154-160212677:-|nuORF 50.855029805455786 0.1352255786796883 3 MA{I|L}E{I|L}{I|L}{I|L}R 8 -1 + 94.607 0.0 0.0 9.8799 9.8799 88.69 0.0 0.0 0.0 60.17010980380633 15.093728280886936 15.093728280886936 3.450528104279016 0 1.3494850021680094 2.0 0.4247425010840047 0.7302046884880937 MA{I|L}E{I|L}{I|L}{I|L}R;MA{I|L}{I|L}E{I|L}{I|L}R;M{I|L}AE{I|L}{I|L}{I|L}R;M{I|L}A{I|L}E{I|L}{I|L}R 9.8799;9.5196;7.0334;6.673 -;-;-;- 152 + 1 2.232 83756.4 0.9900000095367432 15220 6035 21256 HBL1_DMSO_200M_050219_1,21257 HBL1_DMSO_200M_050219_1,21257,LAMELLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21259 105.19 800.0 96990.0 25 0 20157.0 + 36150 SVVDIKLLL 9 85 500.3261260195247 998.6376991058494 2 500.3264648318291 MULTI CID FTMS 0 0 0 21258 51516.6171875 0.394950067090506 16 -0.2801589965820312 1 Unmodified _SVVDIKLLL_ ENSG00000100359|ENST00000248929|SGSM3;ENST00000478085.5_1_22:40800171-40802852:+|nuORF;nc|ENSG00000100359|Q96HU1-2|SGSM3 45.69961567697781 0.0497987121815769 3 [VS]VA{I|L}V[VS]{I|L}{I|L} 10 4 + 58.821 0.0 0.0 5.8901 5.8901 84.423 0.0 0.0 0.0 6.40322266302276 0.2463383099926943 0.2463383099926943 6.40322266302276 0 1.4564608101803795 2.0 0.9361818737241736 0.0 [VS]VA{I|L}V[VS]{I|L}{I|L};[VS]VD{I|L}[K{I|L}]{I|L}{I|L};[VS]VAV{I|L}[VS]{I|L}{I|L};[VS]VA{I|L}{I|L}[TA]{I|L}{I|L};{I|L}{I|L}KDV[VS]{I|L}{I|L};[K{I|L}]{I|L}DV[VS]{I|L}{I|L};[DV]{I|L}K{I|L}[VS]{I|L}{I|L};[K{I|L}]D{I|L}V[VS]{I|L}{I|L};{I|L}{I|L}KD{I|L}[TA]{I|L}{I|L};[K{I|L}]{I|L}D{I|L}[TA]{I|L}{I|L} 5.8901;5.2489;5.0866;4.8619;3.6458;3.6;3.5935;2.9001;2.6176;2.5718 -;+;-;-;-;-;-;-;-;- + 518 1 2.232 66688.0 0.8500000238418579 15221 6036 21258 HBL1_DMSO_200M_050219_1,21259 HBL1_DMSO_200M_050219_1,21259,SVVDIKLLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21262 105.21 800.0 73155.0 25 0 7243.9 + 22600 LPYHIYPFI 9 81 581.8186229914645 1161.622693049729 2 582.3196899294853 MULTI CID FTMS 0 0 0 21261 76931.671875 0.6822889507516071 -7 0.0873184204101562 1 Unmodified _LPYHIYPFI_ ENSG00000109929|ENST00000264027|SC5D 39.957323273325 0.0756908302845263 3 [H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}YP{M(Oxidation (M))|F}{I|L} 9 3 + 47.329 0.0 0.0 4.0744 4.0744 70.165 0.0 0.0 0.0 11.36718797487191 15.769921747127498 11.36718797487191 0.4845500650402812 0 1.1677353201839438 1.154901959985743 0.0 0.0 [H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}YP{M(Oxidation (M))|F}{I|L};[H{I|L}]{M(Oxidation (M))|F}{I|L}Y{I|L}P{M(Oxidation (M))|F}{I|L};[H{I|L}]YP{I|L}YP{M(Oxidation (M))|F}{I|L};[H{I|L}]YPY{I|L}P{M(Oxidation (M))|F}{I|L};[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L};[H{I|L}]{M(Oxidation (M))|F}{I|L}YP{I|L}{M(Oxidation (M))|F}{I|L};[H{I|L}]YP{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L};[H{I|L}]YPYP{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}P]{[WN]|[YH]}{I|L}YP{M(Oxidation (M))|F}{I|L};[{I|L}P]{[WN]|[YH]}Y{I|L}P{M(Oxidation (M))|F}{I|L} 4.0744;4.0327;3.6637;3.6219;3.5364;3.4947;3.1257;3.084;2.9103;2.8686 -;-;-;-;-;-;-;-;+;- + 238 1 2.232 51026.9 0.3300000131130218 15222 6038 21261 HBL1_DMSO_200M_050219_1,21262 HBL1_DMSO_200M_050219_1,21262,LPYHIYPFI True True LPYHIYPFI 105.20913 582.319689929485 1078937.625 21261.0 ENSG00000109929|ENST00000264027|SC5D 5.787653128306071 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21263 105.22 717.0 509650.0 25 0 123290.0 + 44286 YLLPAIVHI 9 95 1038.6344607342714 1037.6271842676715 1 1038.636401355267 MULTI CID FTMS 0 0 0 21261 134381.375 0.175751325796929 -14 0.1916122436523437 2 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 93.76273176245871 0.0134559174279925 3 {I|L}Y{I|L}PA{I|L}VH{I|L} 9 2 + 77.807 0.0 0.0 7.4985 7.4985 92.85 0.0 0.0 0.0 25.43059974617321 9.330984399557424 9.330984399557424 9.330984399557424 0 2.778659694992122 1.0457574905606752 0.0 0.0 {I|L}Y{I|L}PA{I|L}VH{I|L};[Y{I|L}]{I|L}PA{I|L}VH{I|L};[Y{I|L}]PA{I|L}{I|L}VH{I|L};[Y{I|L}]{I|L}PAV{I|L}H{I|L};[PA]{I|L}Y{I|L}{I|L}VH{I|L};[Y{I|L}]P{I|L}A{I|L}VH{I|L};{I|L}Y{I|L}{I|L}[PA]VH{I|L};[PA]{I|L}{I|L}Y{I|L}VH{I|L};[Y{I|L}]PA{I|L}V{I|L}H{I|L};[KG]{I|L}{[MG]|[TS]}A{I|L}VH{I|L} 7.4985;6.5993;6.0498;5.9477;5.8865;5.7339;5.568;5.476;5.3983;5.367 -;+;-;-;-;-;-;-;-;- + 1600 + 1 2.232 231911.9 1.0 15223 6038 21261 HBL1_DMSO_200M_050219_1,21263 HBL1_DMSO_200M_050219_1,21263,YLLPAIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21266 105.24 800.0 17270.0 25 0 1604.9 -1 0 45 869.8723632693291 0 869.8723632693291 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.232 20493.3 0.6800000071525574 15224 6040 21265 HBL1_DMSO_200M_050219_1,21266 HBL1_DMSO_200M_050219_1,21266, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21267 105.26 800.0 219410.0 25 0 31805.0 + 25 AAAPLLPMI 9 81 896.5273646164721 895.5200881498721 1 896.5268432497978 MULTI CID FTMS 0 0 0 21265 111062.5703125 0.5645812466689489 -12 0.2090072631835937 2 Unmodified _AAAPLLPMI_ ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-6|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693|LPIN1 67.41302359171755 0.0220989861905124 3 [{I|L}P]A{I|L}AAPM{I|L} 9 5 + 61.877 0.0 0.0 6.9096 6.9096 61.864 0.0 0.0 0.0 18.65279269351241 14.973024840566469 14.973024840566469 0.0 0 0.805462187404089 1.3010299956639813 0.0 0.0 [{I|L}P]A{I|L}AAPM{I|L};[{I|L}P]{I|L}AAAPM{I|L};[{I|L}P]AAA{I|L}PM{I|L};[{I|L}P]AA{I|L}APM{I|L};[{I|L}P]{[NV]|[RG]}{I|L}PM{I|L};[{I|L}P]{I|L}{[NV]|[RG]}PM{I|L};[{I|L}P]{I|L}AAAQ{[NV]|[RG]};[{I|L}P]A{I|L}AAQ{[NV]|[RG]};[{I|L}P]AAA{I|L}Q{[NV]|[RG]};{[NV]|[RG]}{I|L}P{I|L}PM{I|L} 6.9096;6.9096;6.8242;6.7701;5.3516;4.9613;4.9504;4.9504;4.865;4.8267 -;-;-;-;-;-;-;-;-;- 591 1 2.232 118929.7 0.4099999964237213 15225 6040 21265 HBL1_DMSO_200M_050219_1,21267 HBL1_DMSO_200M_050219_1,21267,AAAPLLPMI True True AAAPLLPMI 105.25591 896.526843249798 3647869.0 21265.0 nc|ENSG00000134324|Q14693|LPIN1;;nc|ENSG00000134324|Q14693-4|LPIN1;;nc|ENSG00000134324|Q14693-5|LPIN1;;nc|ENSG00000134324|Q14693-7|LPIN1;;nc|ENSG00000134324|Q14693-6|LPIN1;;ENSG00000134324|ENST00000674199|LPIN1;;nc|ENSG00000134324|Q14693-2|LPIN1 5.896485805511475 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21269 105.27 800.0 93344.0 25 0 9847.7 + 23489 LTIEDGIFEV 10 102 568.2979366939068 1134.5813204546134 2 568.2978393435478 MULTI CID FTMS 0 0 0 21268 105951.8671875 0.1927359074583798 13 -0.231475830078125 1 Unmodified _LTIEDGIFEV_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 52.268347100219714 0.0668375294751462 3 {NN|[MP]|[D{I|L}]|[EV]}GTE{I|L}{I|L} 7 7 35.626 0.0 0.0 3.14 0.0 0.0 0.0 390.1647304490072 390.1647304490072 6.510030325182921 0.0 0.0 0.0 0 0.3494850021680094 0.0 2.25 0.0 {NN|[MP]|[D{I|L}]|[EV]}GTE{I|L}{I|L} 3.14 - 1381 1 2.232 63386.4 0.9700000286102296 15226 6041 21268 HBL1_DMSO_200M_050219_1,21269 HBL1_DMSO_200M_050219_1,21269,LTIEDGIFEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21270 105.28 344.0 286460.0 25 0 13063.0 + 10564 FVIDGFDEL 9 88 1054.509091927185 1053.501815460585 1 1054.508715808392 MULTI CID FTMS 0 0 0 21268 187118.859375 0.0733231768992183 46 -0.5216598510742188 2 Unmodified _FVIDGFDEL_ ENSG00000022556|ENST00000448584|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;nc|ENSG00000022556|Q9NX02-2|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2 162.95088124538222 0.0007106222868585 3 [{M(Oxidation (M))|F}V]{I|L}DG{M(Oxidation (M))|F}DE{I|L} 9 0 + 65.363 0.0 0.0 6.2044 6.2044 83.522 0.0 0.0 0.0 4.59183145787911 16.478174818886373 4.59183145787911 4.59183145787911 0 1.7803695511246982 0.0 1.1976212463643423 0.0 + + [{M(Oxidation (M))|F}V]{I|L}DG{M(Oxidation (M))|F}DE{I|L};{[{M(Oxidation (M))|F}D]|MM}GD{I|L}{M(Oxidation (M))|F}{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}DG{M(Oxidation (M))|F}ED{I|L};{[{M(Oxidation (M))|F}D]|MM}GV{M(Oxidation (M))|F}E{I|L}D{I|L};{[{M(Oxidation (M))|F}D]|MM}GVE{M(Oxidation (M))|F}{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}DGD{M(Oxidation (M))|F}E{I|L};{[{M(Oxidation (M))|F}D]|MM}G{M(Oxidation (M))|F}VE{I|L}D{I|L};{[{M(Oxidation (M))|F}D]|MM}GD{I|L}{M(Oxidation (M))|F}VE{I|L};{[{M(Oxidation (M))|F}D]|MM}G{M(Oxidation (M))|F}{I|L}D{I|L}D{I|L};{[{M(Oxidation (M))|F}D]|MM}GV{M(Oxidation (M))|F}EVE{I|L} 6.2044;5.7685;5.6838;5.6457;5.4828;5.4725;5.36;5.3399;5.252;5.2171 +;-;-;-;-;-;-;-;-;- + 5399 1 2.232 68964.7 1.0 15227 6041 21268 HBL1_DMSO_200M_050219_1,21270 HBL1_DMSO_200M_050219_1,21270,FVIDGFDEL True True FVIDGFDEL 105.27987 1054.50871580839 19930162.0 21268.0 nc|ENSG00000022556|Q9NX02-4|NLRP2;;nc|ENSG00000022556|Q9NX02-3|NLRP2;;nc|ENSG00000022556|Q9NX02-2|NLRP2;;nc|ENSG00000022556|Q9NX02-5|NLRP2;;ENSG00000022556|ENST00000448584|NLRP2;;ENST00000540597.5_1_19:55476735-55501561:+|nuORF 6.89545202255249 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21273 105.3 781.0 240820.0 25 0 9170.8 -1 0 126 857.066465869744 2568.177568209432 3 857.4008056521416 MULTI CID FTMS 0 0 0 21272 110204.8125 0.2061045521144606 -12 0.1785049438476562 1 3 [H{I|L}]E{I|L}G{I|L}Y{I|L}V 9 -1 50.758 0.0 0.0 1.9764 0.0 0.0 0.0 1527.5638634732295 1527.5638634732295 32.01213124741251 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 [H{I|L}]E{I|L}G{I|L}Y{I|L}V 1.9764 - 2612 1 2.232 128716.2 1.0 15228 6043 21272 HBL1_DMSO_200M_050219_1,21273 HBL1_DMSO_200M_050219_1,21273, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21274 105.31 800.0 276530.0 25 0 60793.0 + 1229 AIIPEGGLFTV 11 101 1116.6292138548672 1115.6219373882673 1 1116.629077136517 MULTI CID FTMS 0 0 0 21272 144253.640625 0.8570387403853625 -1 0.004058837890625 2 Unmodified _AIIPEGGLFTV_ ENST00000563686.5_1_18:52942938-53070719:-|nuORF 114.6490535036381 0.024092277119725 3 [EP]GG{I|L}A{I|L}{I|L}{M(Oxidation (M))|F}TV 11 6 + 97.375 0.0 0.0 8.7284 8.7284 88.608 0.0 0.0 0.0 18.02501280419058 16.575773191777927 16.575773191777927 3.979400086720375 0 0.2887254899964357 1.3979400086720375 1.579689690656103 0.0 [EP]GG{I|L}A{I|L}{I|L}{M(Oxidation (M))|F}TV;[EP]GG{I|L}{I|L}A{I|L}{M(Oxidation (M))|F}TV;[EP]N{I|L}A{I|L}{I|L}{M(Oxidation (M))|F}TV;[EP]GG{I|L}{M(Oxidation (M))|F}A{I|L}{I|L}TV;[EP]GG{I|L}{M(Oxidation (M))|F}T{I|L}A{I|L}V;[EP]N{I|L}{I|L}A{I|L}{M(Oxidation (M))|F}TV;[EP]GG{I|L}A{I|L}{M(Oxidation (M))|F}{I|L}TV;[EP]GG{I|L}{M(Oxidation (M))|F}{I|L}A{I|L}TV;[EP]GG{I|L}{M(Oxidation (M))|F}TA{I|L}{I|L}V;[EP]GG{I|L}{I|L}A{M(Oxidation (M))|F}{I|L}TV 8.7284;8.3717;8.1389;7.8013;7.7936;7.7822;7.6841;7.6434;7.3936;7.3274 -;-;-;-;-;-;-;-;-;- 9392 1 2.232 140224.9 1.0 15229 6043 21272 HBL1_DMSO_200M_050219_1,21274 HBL1_DMSO_200M_050219_1,21274,AIIPEGGLFTV True True AIIPEGGLFTV 105.31388 1116.62907713652 2454279.375 21272.0 ENST00000563686.5_1_18:52942938-53070719:-|nuORF 6.602948983510335 1.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21277 105.33 566.0 173640.0 25 0 7369.5 + + -1 IPNFDVREIVNNI 13 109 771.9173629304285 1541.8201729276568 2 771.9174682497978 MULTI CID FTMS 0 0 0 21276 122760.9921875 0.4921605580159988 -10 0.1633377075195312 1 Oxidation (M) _LKWM(Oxidation (M))KKFVHYF_ nc|ENSG00000131747|P11388-4|TOP2A;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A 3.2813086475875832 0.8596665074481906 3 {I|L}PN{M(Oxidation (M))|F}DVK[RV]MN 11 -1 76.226 0.0 0.0 4.9439 0.0 0.0 0.0 225.08852564029533 225.08852564029533 27.71051863481746 0.0 0.0 0.0 0 1.3494850021680094 1.5228787452803376 0.0 1.8441876774005248 {I|L}PN{M(Oxidation (M))|F}DVK[RV]MN 4.9439 - 32548 + 1 2.232 72971.6 1.0 15230 6045 21276 HBL1_DMSO_200M_050219_1,21277 HBL1_DMSO_200M_050219_1,21277,LKWMKKFVHYF False False IPNFDVREIVNNI 105.33043 771.917468249798 4065888.75 21276.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 5.645753542582194 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21278 105.34 800.0 140230.0 25 0 28649.0 + 22223 LPREILNLI 9 113 540.8418754603272 1079.6691979874545 2 540.8428832888603 MULTI CID FTMS 0 0 0 21276 109925.5625 1.0 0 0.0 2 Unmodified _LPREILNLI_ ENSG00000163428|ENST00000295628|LRRC58 38.17557092003332 0.0854718145212029 3 [{I|L}P]RE{I|L}N{I|L}{I|L}{I|L} 9 2 + 63.1 0.0 0.0 5.8444 5.8444 81.715 0.0 0.0 0.0 7.464169411070927 40.90874491738596 7.464169411070927 3.979400086720375 0 0.9247425010840048 1.154901959985743 0.0 1.024227503252014 [{I|L}P]RE{I|L}N{I|L}{I|L}{I|L};[{I|L}P]D{[VA]|[{I|L}G]}{I|L}N{I|L}{I|L}{I|L};[{I|L}P]RE{I|L}{I|L}N{I|L}{I|L};[{I|L}P]RE{I|L}GG{I|L}{I|L}{I|L};[{I|L}P]D{[VA]|[{I|L}G]}{I|L}{I|L}N{I|L}{I|L};[VP]E{[VA]|[{I|L}G]}{I|L}N{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}N{I|L}{I|L}{I|L};[VP][W{I|L}]{I|L}N{I|L}{I|L}{I|L};[{I|L}P]RE{I|L}{I|L}GG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}P{[VA]|[{I|L}G]}{I|L}N{I|L}{I|L}{I|L} 5.8444;5.4758;5.2643;4.9915;4.8958;4.6042;4.5692;4.4411;4.4115;4.3075 -;-;+;-;-;-;-;-;-;- + 829 1 2.232 90067.0 0.7699999809265137 15231 6045 21276 HBL1_DMSO_200M_050219_1,21278 HBL1_DMSO_200M_050219_1,21278,LPREILNLI True True LPREILNLI 105.34426 540.84288328886 3210429.75 21276.0 ENSG00000163428|ENST00000295628|LRRC58 2.5740970025459924 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21279 105.36 800.0 178050.0 25 0 10262.0 + 39238 VAADAVASLLI 11 95 1042.6134180871338 1041.606141620534 1 1042.612597644329 MULTI CID FTMS 0 0 0 21276 97707.15625 0.7348401262796449 -3 0.0380706787109375 3 Unmodified _VAADAVASLLI_ ENSG00000126264|ENST00000246551|HCST;nc|ENSG00000126264|Q9UBK5-2|HCST 62.57269311338072 0.058704053366003 3 [Q{I|L}]DAVTVA{I|L}{I|L} 10 6 + 68.083 0.0 0.0 6.5364 6.5364 77.679 0.0 0.0 0.0 1.7609125905568137 16.53212513775344 1.7609125905568137 0.2237030067185941 0 0.0 0.0 2.7728787452803374 0.0 [Q{I|L}]DAVTVA{I|L}{I|L};[Q{I|L}]DAVTAV{I|L}{I|L};[Q{I|L}]DAVATV{I|L}{I|L};[Q{I|L}]DAVTG{I|L}{I|L}{I|L};[Q{I|L}]DAVAS{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAVTVA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAVTAV{I|L}{I|L};[Q{I|L}]DAVT{I|L}G{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAVATV{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAVTG{I|L}{I|L}{I|L} 6.5364;6.5149;6.4929;6.4641;6.4422;6.3673;6.3458;6.3335;6.3239;6.2951 -;-;-;-;-;-;-;-;-;- 7401 1 2.232 92889.8 0.3700000047683716 15232 6045 21276 HBL1_DMSO_200M_050219_1,21279 HBL1_DMSO_200M_050219_1,21279,VAADAVASLLI True True VAADAVASLLI 105.35813 1042.61259764433 1239591.25 21276.0 ENSG00000126264|ENST00000246551|HCST;;nc|ENSG00000126264|Q9UBK5-2|HCST 0.7349279075860977 1.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21280 105.37 800.0 88796.0 25 0 10664.0 + 1230 AIIPEGGLFTV 11 86 558.8187029209832 1115.6228529087664 2 558.8190185427666 MULTI CID FTMS 0 0 0 21276 90735.1953125 0.992060258360428 3 -0.0777587890625 4 Unmodified _AIIPEGGLFTV_ ENST00000563686.5_1_18:52942938-53070719:-|nuORF 36.12702656103203 0.2720571796884491 3 [EP]GG{I|L}{M(Oxidation (M))|F}TV 8 3 53.868 0.0 0.0 4.8285 0.0 0.0 0.0 312.193462125262 312.193462125262 21.420722437723327 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.555462187404089 0.0 + [EP]GG{I|L}{M(Oxidation (M))|F}TV 4.8285 + + 675 1 2.232 64950.2 0.3499999940395355 15233 6045 21276 HBL1_DMSO_200M_050219_1,21280 HBL1_DMSO_200M_050219_1,21280,AIIPEGGLFTV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21282 105.38 24.0 3281300.0 25 0 481990.0 + 44282 YLLPAIVHI 9 55 519.8210361753863 1037.6275194175726 2 519.8211547732353 MULTI CID FTMS 0 0 0 21281 2142147.25 0.951233643469544 2 -0.0237350463867187 1 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 36.46614268402704 0.0948557732959553 3 [Y{I|L}]{I|L}PA{I|L}V[H{I|L}] 9 0 + 53.579 0.0 0.0 5.1636 5.1636 86.899 0.0 0.0 0.0 31.183174735333168 4.762036441594191 4.762036441594191 13.979400086720368 0 0.4247425010840047 2.0 0.0 0.0 + + [Y{I|L}]{I|L}PA{I|L}V[H{I|L}];[Y{I|L}]{I|L}{I|L}[PA]V[H{I|L}] 5.1636;3.8164 +;- + 114 + 1 2.232 63615.3 1.0 15234 6046 21281 HBL1_DMSO_200M_050219_1,21282 HBL1_DMSO_200M_050219_1,21282,YLLPAIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21283 105.39 800.0 79657.0 25 0 11239.0 -1 FICPQEMMGIL 11 73 657.298744890325 1312.58293684745 2 657.2990600466728 MULTI CID FTMS 0 0 0 21281 91491.7421875 0.6587543199497159 -11 0.2173614501953125 2 2 Oxidation (M) _FICPQEM(Oxidation (M))M(Oxidation (M))GIL_ nc|ENSG00000147274|P38159-3|RBMX 12.240655878213236 0.7805268987462184 3 D[NP]Y{M(Oxidation (M))|F}{I|L}{I|L} 7 -1 38.231 0.0 0.0 2.9127 0.0 0.0 432.149705955275 0.0 432.149705955275 0.0 22.746907182741367 0.0 0.0 0 0.5 0.0 0.0 0.0 D[NP]Y{M(Oxidation (M))|F}{I|L}{I|L} 2.9127 - 149 1 2.232 61742.0 0.9900000095367432 15235 6046 21281 HBL1_DMSO_200M_050219_1,21283 HBL1_DMSO_200M_050219_1,21283,FICPQEMMGIL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 21285 105.4 68.0 942830.0 25 0 140530.0 + 12569 GVIDLIFEKA 10 84 552.8186602366919 1103.6227675401838 2 552.8188964724541 MULTI CID FTMS 0 0 0 21284 581963.8125 0.6439076031946497 2 -0.0086135864257812 1 Unmodified _GVIDLIFEKA_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 49.52724829834842 0.0829255630816734 3 [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA] 10 0 + 86.758 0.0 0.0 7.8612 7.8612 97.551 0.0 0.0 0.0 45.062893943202624 10.522562268522575 10.522562268522575 86.7575939030096 0 1.4291746928241125 2.0 0.3807196863200844 0.3252574989159953 + + [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA] 7.8612 + + 434 + 1 2.232 53644.5 1.0 15236 6047 21284 HBL1_DMSO_200M_050219_1,21285 HBL1_DMSO_200M_050219_1,21285,GVIDLIFEKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21288 105.42 800.0 31398.0 25 0 890.48 -1 0 69 1149.514015334359 0 1149.657519519329 PEAK CID FTMS 0 0 0 21287 13208.744140625 0.8990147347778538 1 -0.0381546020507812 1 3 Y 1 -1 6.9897 0.0 0.0 0.3043 0.0 0.0 1774.741396291962 356.1983736627563 2130.9397699547185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.3043 - 8 + 1 2.232 24560.6 0.4600000083446502 15237 6049 21287 HBL1_DMSO_200M_050219_1,21288 HBL1_DMSO_200M_050219_1,21288, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21289 105.43 800.0 30052.0 25 0 968.44 -1 0 67 1133.124072253704 0 1133.124072253704 PEAK CID FTMS 0 0 0 -1 0 2 3 {I|L} 1 -1 3.9794 0.0 0.0 0.17575 0.0 0.0 1299.5714344470582 848.5591524713499 2148.130586918408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.17575 - 17 + 1 2.232 23439.8 0.4799999892711639 15238 6049 21287 HBL1_DMSO_200M_050219_1,21289 HBL1_DMSO_200M_050219_1,21289, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21290 105.44 463.0 58958.0 25 0 2684.8 -1 0 68 1173.246386706829 0 1173.246386706829 PEAK CID FTMS 0 0 0 -1 0 3 3 M 1 -1 0.48455 0.0 0.0 0.020668 0.0 0.0 1608.7177357165897 601.6964205377561 2210.414156254345 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.020668 - 3 + 1 2.232 23987.1 1.0 15239 6049 21287 HBL1_DMSO_200M_050219_1,21290 HBL1_DMSO_200M_050219_1,21290, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21292 105.44 94.0 551500.0 25 0 52908.0 + + 18761 MALELLRI 8 58 479.791395495078 957.568238056956 2 479.7914916872978 MULTI CID FTMS 0 0 0 21291 239582.234375 0.4638990864796777 4 -0.0497055053710937 1 Unmodified _LAMELLLR_ ENST00000492566.1_1_2:114202545-114202572:+|nuORF 38.15118350030904 0.2652218139009398 3 MA{I|L}E{I|L}{I|L}[R{I|L}] 8 -1 + 84.373 0.0 0.0 8.8112 8.8112 87.237 0.0 0.0 0.0 58.68685053883517 8.979400086720375 8.979400086720375 3.0102999566398125 0 0.8494850021680094 2.0 0.4247425010840047 0.3494850021680094 MA{I|L}E{I|L}{I|L}[R{I|L}];MA{I|L}{I|L}E{I|L}[R{I|L}] 8.8112;8.4968 -;- 59 + 1 2.232 48073.2 1.0 15240 6050 21291 HBL1_DMSO_200M_050219_1,21292 HBL1_DMSO_200M_050219_1,21292,LAMELLLR False False MALELLRI 105.44247 479.791491687298 11534168.25 21291.0 ENST00000492566.1_1_2:114202545-114202572:+|nuORF 4.43289057413737 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21293 105.45 245.0 250410.0 25 0 69611.0 + + -1 NIPPYFVAL 9 58 1032.5651705502096 1031.5578940836097 1 1033.575732409954 MULTI CID FTMS 0 0 0 21291 81099.59375 0.3832043378853842 -7 0.1537551879882812 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PRQLFVI_ ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6 8.593279151180031 0.7721714526254883 3 {[QV]|[N{I|L}]|[RA]|[KV]}[YN]VAGVA 9 -1 44.359 0.0 0.0 4.3001 0.0 0.0 0.0 127.06836706628464 127.06836706628464 35.94212497064703 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[YN]VAGVA 4.3001 - 446 1 2.232 46082.6 1.0 15241 6050 21291 HBL1_DMSO_200M_050219_1,21293 HBL1_DMSO_200M_050219_1,21293,CPRQLFVI False False NIPPYFVAL 105.44747 1033.57573240995 19936258.0 21291.0 ENSG00000196419|ENST00000360079|XRCC6;;nc|ENSG00000196419|P12956-2|XRCC6 0.3400755400458972 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21296 105.46 491.0 84753.0 25 0 3126.3 -1 0 83 874.247218835029 0 873.9857665896416 PEAK CID FTMS 0 0 0 21295 15393.1875 1.0 0 0.0 1 3 GM{I|L}A 4 -1 14.702 0.0 0.0 0.84183 0.0 0.0 1022.0860991917392 349.18906580142817 1371.2751649931674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GM{I|L}A 0.84183 - 117 + 1 2.232 33832.7 1.0 15242 6052 21295 HBL1_DMSO_200M_050219_1,21296 HBL1_DMSO_200M_050219_1,21296, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21297 105.47 464.0 217770.0 25 0 114430.0 -1 LCLIQAKL 8 68 958.57643903956 957.56916257296 1 958.5763427615166 MULTI CID FTMS 0 0 0 21295 143384.984375 1.0 0 0.0 2 Carbamidomethyl (C) _LC(Carbamidomethyl (C))LIQAKL_ ENSG00000103042|ENST00000219320|SLC38A7 13.50788311687929 0.7113601687236069 3 {[QS]|[NT]}[QT]{I|L}[R{I|L}]{I|L} 8 -1 + 18.645 0.0 0.0 1.9471 1.9471 70.774 0.0 0.0 0.0 0.6645383313978748 7.870156338638596 0.6645383313978748 3.0102999566398143 0 0.5 0.0 0.0 0.0 {[QS]|[NT]}[QT]{I|L}[R{I|L}]{I|L};{[QN]|[E{I|L}]|[KN]}{[DS]|[MA]|[CV]|TT}{I|L}[R{I|L}]{I|L};{[QN]|[E{I|L}]|[KN]}[RD]{I|L}TV{I|L} 1.9471;1.6328;1.0987 -;-;- 39 1 2.232 75287.5 1.0 15243 6052 21295 HBL1_DMSO_200M_050219_1,21297 HBL1_DMSO_200M_050219_1,21297,LCLIQAKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21298 105.47 185.0 93592.0 25 0 6807.6 -1 0 46 993.5288164395284 0 993.5296508669852 PEAK CID FTMS 0 0 0 21295 125234.1796875 1.0 0 0.0 3 3 {I|L}{M(Oxidation (M))|F}{I|L}[QA]S 6 -1 21.56 0.0 0.0 1.0861 0.0 0.0 1010.527224088238 312.1207369440063 1322.6479610322444 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.5 {I|L}{M(Oxidation (M))|F}{I|L}[QA]S 1.0861 - 50 + 1 2.232 21642.6 1.0 15244 6052 21295 HBL1_DMSO_200M_050219_1,21298 HBL1_DMSO_200M_050219_1,21298, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21299 105.48 514.0 104690.0 25 0 3205.6 -1 0 112 944.6268145577942 0 944.9453002810478 PEAK CID FTMS 0 0 0 -1 0 4 3 T{I|L}{I|L}EQ 5 -1 21.102 0.0 0.0 1.1181 0.0 0.0 1092.7895029509266 207.11438928775627 1299.9038922386828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 T{I|L}{I|L}EQ 1.1181 - 695 + 1 2.232 43043.3 1.0 15245 6052 21295 HBL1_DMSO_200M_050219_1,21299 HBL1_DMSO_200M_050219_1,21299, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21306 105.51 214.0 1073700.0 25 0 361560.0 + 44287 YLLPAIVHI 9 80 1038.6344607342714 1037.6271842676715 1 1038.636279284954 MULTI CID FTMS 0 0 0 21305 404285.1875 0.5287463214540338 6 -0.0427703857421875 1 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 109.1542453654746 0.0061419920015381 3 {I|L}Y{I|L}PA{I|L}VH{I|L} 9 2 + 82.488 0.0 0.0 7.9497 7.9497 94.741 0.0 0.0 0.0 57.53977796201987 11.39506772603255 11.39506772603255 12.469165662315689 0 2.7416440611282624 1.2218487496163564 0.0 0.0 {I|L}Y{I|L}PA{I|L}VH{I|L};[Y{I|L}]{I|L}PA{I|L}VH{I|L};[Y{I|L}]{I|L}PAV{I|L}H{I|L};[Y{I|L}]PA{I|L}{I|L}VH{I|L};[Y{I|L}]P{I|L}A{I|L}VH{I|L};[Y{I|L}]PA{I|L}V{I|L}H{I|L};[Y{I|L}]P{I|L}AV{I|L}H{I|L};[Y{I|L}]{I|L}PG{I|L}{I|L}H{I|L};[Y{I|L}]{I|L}PAVH{I|L}{I|L};{I|L}Y{I|L}{I|L}[PA]VH{I|L} 7.9497;6.748;6.4358;6.1513;6.1253;5.8391;5.8131;5.4942;5.4942;5.4529 -;+;-;-;-;-;-;-;-;- + 567 + 1 2.232 150376.7 1.0 15246 6058 21305 HBL1_DMSO_200M_050219_1,21306 HBL1_DMSO_200M_050219_1,21306,YLLPAIVHI True True YLLPAIVHI 105.50982 1038.63627928495 104864142.5 21305.0 ENST00000432525.5_1_22:38886367-38903636:-|nuORF;;nc|ENSG00000100201|Q92841-1|DDX17;;ENSG00000108654|ENST00000225792|DDX5;;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;;ENSG00000100201|ENST00000403230|DDX17;;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;;nc|ENSG00000100201|Q92841-3|DDX17;;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;;nc|ENSG00000100201|Q92841-2|DDX17 6.905751546223958 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21309 105.52 269.0 214860.0 25 0 18091.0 + 23486 LTIEDGIFEV 10 72 1135.588273923705 1134.580997457105 1 1135.587573230267 MULTI CID FTMS 0 0 0 21308 144889.28125 0.0693066437174069 40 -0.3858642578125 1 Unmodified _LTIEDGIFEV_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 62.57269311338072 0.0298375429882549 3 E{I|L}T{I|L}{M(Oxidation (M))|F}EV 7 5 60.772 0.0 0.0 5.3564 0.0 0.0 285.13325698066564 0.0 285.13325698066564 0.0 25.26909019015192 0.0 0.0 0 0.4247425010840047 0.0 2.638210492164445 0.0 E{I|L}T{I|L}{M(Oxidation (M))|F}EV 5.3564 - 3138 1 2.232 43550.0 1.0 15247 6060 21308 HBL1_DMSO_200M_050219_1,21309 HBL1_DMSO_200M_050219_1,21309,LTIEDGIFEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21312 105.54 800.0 187380.0 25 0 24890.0 + 26 AAAPLLPMI 9 113 896.5273646164721 895.5200881498721 1 896.5273925662041 MULTI CID FTMS 0 0 0 21311 110501.0234375 0.5617266500766092 10 -0.103363037109375 1 Unmodified _AAAPLLPMI_ ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-6|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693|LPIN1 56.04830969593885 0.0282699710924866 3 [{I|L}P]AAA{I|L}PM{I|L} 9 4 + 63.611 0.0 0.0 7.1032 7.1032 85.818 0.0 0.0 0.0 19.366130211356065 49.96584697476848 19.366130211356065 4.286662482156345 0 1.1549471895720984 1.2218487496163564 0.0 0.0 [{I|L}P]AAA{I|L}PM{I|L};[{I|L}P]{I|L}AAAPM{I|L};[{I|L}P]A{I|L}AAPM{I|L};[{I|L}P]AA{I|L}APM{I|L};[{I|L}P]{[NV]|[RG]}{I|L}PM{I|L};[{I|L}P]{I|L}{[NV]|[RG]}PM{I|L};{[NV]|[RG]}{I|L}P{I|L}PM{I|L};{[NV]|[RG]}P{I|L}{I|L}PM{I|L};[{I|L}P][KT]PPM{I|L};[{I|L}P]AAAQ{[NV]|[RG]}{I|L} 7.1032;6.6246;6.6246;6.3768;5.7388;5.0124;4.8131;4.5417;4.5081;4.4461 -;-;-;-;-;-;-;-;-;- 976 1 2.232 102865.8 0.3899999856948852 15248 6062 21311 HBL1_DMSO_200M_050219_1,21312 HBL1_DMSO_200M_050219_1,21312,AAAPLLPMI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21315 105.55 147.0 981030.0 25 0 42789.0 -1 0 137 857.066465869744 2568.177568209432 3 857.4025756716728 MULTI CID FTMS 0 0 0 21314 268487.125 0.5021234317387383 9 -0.0885162353515625 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 60.583 0.0 0.0 2.359 0.0 0.0 0.0 1527.5610618310643 1527.5610618310643 50.09881272697172 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.359 - 1347 1 2.252 98665.7 1.0 15249 6064 21314 HBL1_DMSO_200M_050219_1,21315 HBL1_DMSO_200M_050219_1,21315, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21316 105.57 800.0 354670.0 25 0 16982.0 + 14038 IAIYGLVV 8 213 847.5291959276022 846.5219194610022 1 847.5342895388603 MULTI CID FTMS 0 0 0 21314 89764.4453125 0.5650524020452313 12 -0.1270828247070312 2 Unmodified _IAIYGLVV_ ENSG00000185883|ENST00000330398|ATP6V0C;ENST00000417255.1_1_6:42695019-42695259:+|nuORF 41.81723621529253 0.2038889569391319 3 [Y{I|L}]GA{I|L}{I|L}VV 8 4 + 52.617 0.0 0.0 6.2157 6.2157 76.448 0.0 0.0 0.0 3.187587626244124 16.40978057358332 3.187587626244124 0.0443219174010778 0 0.3054621874040891 0.9208187539523752 0.0 0.0 [Y{I|L}]GA{I|L}{I|L}VV;[Y{I|L}]GA{I|L}V{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VA{I|L}{I|L}VV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VA{I|L}V{I|L}V;[Y{I|L}]AG{I|L}{I|L}VV;[Y{I|L}]AG{I|L}V{I|L}V;[Y{I|L}]Q{I|L}{I|L}VV;[Y{I|L}]Q{I|L}V{I|L}V;[Y{I|L}]G{I|L}A{I|L}VV;[Y{I|L}]G{I|L}AV{I|L}V 6.2157;6.2105;5.8392;5.8339;5.5045;5.4993;5.4585;5.4533;5.39;5.3848 -;-;-;-;-;-;-;-;-;- 1979 1 2.252 179957.8 0.4300000071525574 15250 6064 21314 HBL1_DMSO_200M_050219_1,21316 HBL1_DMSO_200M_050219_1,21316,IAIYGLVV False True IAIYGLVV 105.56531 847.53428953886 1027100.875 21314.0 ENST00000417255.1_1_6:42695019-42695259:+|nuORF;;ENSG00000185883|ENST00000330398|ATP6V0C 3.290184815724691 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21317 105.57 157.0 947780.0 25 0 55887.0 + 4952 DGPGVLWI 8 116 856.4563595067375 855.4490830401375 1 856.4570190310478 MULTI CID FTMS 0 0 0 21314 280290.84375 0.7935091597672335 12 -0.1270828247070312 3 Unmodified _DGPGVLWI_ ENSG00000166750|ENST00000299977|SLFN5 49.66892048692302 0.1408045912742846 3 [VP]ND{I|L}W{I|L} 7 4 + 51.348 0.0 0.0 6.0024 6.0024 76.329 0.0 0.0 0.0 0.4132529882056701 16.320232147054057 0.4132529882056701 0.4132529882056701 0 0.5796896906561032 0.0 0.7302046884880937 0.3054621874040891 [VP]ND{I|L}W{I|L};[NP]DV{I|L}W{I|L};[NP]VD{I|L}W{I|L};[VP]GGD{I|L}W{I|L};YYV{I|L}W{I|L};[H{I|L}][C(Carbamidomethyl (C))K]W{I|L};[VP]N{I|L}DW{I|L};[H{I|L}]C[KG]W{I|L};[VP]NEVW{I|L};[NP]D{I|L}VW{I|L} 6.0024;5.9541;5.3912;5.2792;4.8165;4.5339;4.1578;4.1038;4.0118;3.9635 -;-;-;-;-;-;-;-;-;- 959 1 2.252 105014.7 1.0 15251 6064 21314 HBL1_DMSO_200M_050219_1,21317 HBL1_DMSO_200M_050219_1,21317,DGPGVLWI False True DGPGVLWI 105.56844 856.457019031048 2996089.0 21314.0 ENSG00000166750|ENST00000299977|SLFN5 5.6880771319071455 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21320 105.58 358.0 346070.0 25 0 12515.0 -1 LLCLLLYYCRR 11 145 771.9173629304285 1541.8201729276568 2 771.9190551638603 MULTI CID FTMS 0 0 0 21319 169618.703125 0.6800176024355256 11 -0.1044082641601562 1 2 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))LLLYYC(Carbamidomethyl (C))RR_ ENSG00000148468|ENST00000378116|FAM171A1 5.731851221503515 0.8481046878870278 3 [{I|L}P]N{M(Oxidation (M))|F}D[RD]{I|L}VND{I|L} 12 -1 68.437 0.0 0.0 4.4387 0.0 0.0 0.0 127.08344520503024 127.08344520503024 14.875426467674906 0.0 0.0 0.0 0 1.3494850021680094 1.6989700043360187 0.3807196863200844 1.1906140654642814 [{I|L}P]N{M(Oxidation (M))|F}D[RD]{I|L}VND{I|L} 4.4387 - 86430 1 2.252 90513.2 1.0 15252 6066 21319 HBL1_DMSO_200M_050219_1,21320 HBL1_DMSO_200M_050219_1,21320,LLCLLLYYCRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21323 105.6 800.0 137670.0 25 0 27474.0 + 22224 LPREILNLI 9 121 540.8423804434481 1079.670207953696 2 540.8430053591728 MULTI CID FTMS 0 0 0 21322 28198.779296875 0.2174864709798209 7 -0.0625228881835937 1 Unmodified _LPREILNLI_ ENSG00000163428|ENST00000295628|LRRC58 45.69961567697781 0.0497987121815769 3 [{I|L}P]RE{I|L}{I|L}N{I|L}{I|L} 9 0 + 61.5 0.0 0.0 5.6962 5.6962 79.305 0.0 0.0 0.0 11.061971664671333 39.3085940558673 11.061971664671333 2.9659780392387347 0 0.5 1.0969100130080565 0.0 1.055462187404089 + + [{I|L}P]RE{I|L}{I|L}N{I|L}{I|L};[{I|L}P]RE{I|L}N{I|L}{I|L}{I|L};[{I|L}P]RE{I|L}{I|L}GG{I|L}{I|L};[{I|L}P]RE{I|L}GG{I|L}{I|L}{I|L};[VP][W{I|L}]{I|L}{I|L}N{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}{I|L}N{I|L}{I|L};[VP][W{I|L}]{I|L}N{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}N{I|L}{I|L}{I|L};[VP]V{I|L}[WQ]{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}{I|L}GG{I|L}{I|L} 5.6962;5.4215;4.8433;4.5686;3.9336;3.8786;3.6589;3.6039;3.217;3.0257 +;-;-;-;-;-;-;-;-;- + 1083 1 2.252 89340.2 0.3499999940395355 15253 6068 21322 HBL1_DMSO_200M_050219_1,21323 HBL1_DMSO_200M_050219_1,21323,LPREILNLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21327 105.62 587.0 30215.0 25 0 1943.4 -1 0 57 817.0114699704484 0 817.0460693240166 PEAK CID FTMS 0 0 0 -1 0 1 3 E{M(Oxidation (M))|F} 2 -1 14.024 0.0 0.0 0.85929 0.0 0.0 1079.7883685524216 273.0881746881469 1352.8765432405685 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 E{M(Oxidation (M))|F} 0.85929 - 7 + 1 2.252 21279.9 1.0 15254 6071 21326 HBL1_DMSO_200M_050219_1,21327 HBL1_DMSO_200M_050219_1,21327, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21328 105.63 332.0 237910.0 25 0 10404.0 + 24694 MMVGDLLEV 9 97 1006.4911855816335 1005.4839091150336 1 1006.488696277142 MULTI CID FTMS 0 0 0 21326 151524.0625 0.7087624900830303 -2 0.0081253051757812 2 Unmodified _MMVGDLLEV_ ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A 81.61307344734483 0.0171259190214613 3 {[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))M{I|L}{I|L}EV 8 5 + 68.128 0.0 0.0 6.7756 6.7756 85.641 0.0 0.0 0.0 5.927353778890129 4.771212547196626 4.771212547196626 4.771212547196626 0 0.25 1.2218487496163564 1.0044321917401078 0.0 {[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))M{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))M{I|L}{I|L}PM;{[{M(Oxidation (M))|F}D]|MM}VGD{I|L}{I|L}EV;{[{M(Oxidation (M))|F}D]|MM}[RD]{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C)){I|L}M{I|L}EV;{[QN]|[E{I|L}]|[KN]}[CG]M{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))M{I|L}E{I|L}V;{[{M(Oxidation (M))|F}D]|MM}VGD{I|L}{I|L}PM;{[{M(Oxidation (M))|F}D]|MM}[RD]{I|L}{I|L}PM;{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C)){I|L}M{I|L}PM 6.7756;6.3011;6.1861;6.1833;6.117;5.8544;5.729;5.7116;5.7088;5.6425 -;-;+;-;-;-;-;-;-;- + 5668 1 2.252 57590.6 1.0 15255 6071 21326 HBL1_DMSO_200M_050219_1,21328 HBL1_DMSO_200M_050219_1,21328,MMVGDLLEV True True MMVGDLLEV 105.62888 1006.48869627714 1335977.625 21326.0 ENSG00000073614|ENST00000399788|KDM5A;;nc|ENSG00000073614|P29375-2|KDM5A 3.6155691146850586 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21330 105.63 72.0 927900.0 25 0 121880.0 + 44283 YLLPAIVHI 9 68 519.8210361753863 1037.6275194175726 2 519.8210937380791 MULTI CID FTMS 0 0 0 21329 405199.1875 0.1799311879500925 28 -0.2708740234375 1 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 36.46614268402704 0.0948557732959553 3 [Y{I|L}]{I|L}PA{I|L}V[H{I|L}] 9 0 + 55.34 0.0 0.0 5.3333 5.3333 87.866 0.0 0.0 0.0 18.38476776939273 4.762036441594191 4.762036441594191 15.74031267727718 0 0.4247425010840047 2.0 0.0 0.0 + + [Y{I|L}]{I|L}PA{I|L}V[H{I|L}];[Y{I|L}]{I|L}{I|L}[PA]V[H{I|L}];[PA]{I|L}VH{I|L}{I|L}[Y{I|L}];[PA]{I|L}V{I|L}H{I|L}[Y{I|L}];[PA]{I|L}{I|L}VH{I|L}[Y{I|L}];[HV]{I|L}[PA]{I|L}{I|L}[Y{I|L}];[H{I|L}]V[PA]{I|L}{I|L}[Y{I|L}] 5.3333;3.8164;3.0899;2.34;2.0498;0.43949;0.37498 +;-;-;-;-;-;- + 155 + 1 2.252 56905.2 1.0 15256 6072 21329 HBL1_DMSO_200M_050219_1,21330 HBL1_DMSO_200M_050219_1,21330,YLLPAIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21333 105.65 393.0 118610.0 25 0 17165.0 + 12602 GVIPQISLI 9 73 939.5866575187788 938.5793810521786 1 939.5850707888604 MULTI CID FTMS 0 0 0 21332 80825.734375 0.8564610456402268 1 -0.0096054077148437 1 Unmodified _GVIPQISLI_ ENSG00000114054|ENST00000251654|PCCB;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;nc|ENSG00000114054|P05166-2|PCCB 38.17557092003332 0.0854718145212029 3 [QP]{I|L}S{I|L}R{I|L}{I|L} 8 5 + 59.518 0.0 0.0 6.3413 6.3413 81.818 0.0 0.0 0.0 6.989700043360188 33.704401396024494 6.989700043360188 3.0102999566398125 0 0.0 0.0 1.1382104921644451 0.0 [QP]{I|L}S{I|L}R{I|L}{I|L};[QP]{I|L}S{I|L}{I|L}R{I|L};[QP]VT{I|L}R{I|L}{I|L};[QP]VT{I|L}{I|L}R{I|L};[QP]{I|L}S{I|L}[VG]{I|L}{I|L};[QP]{I|L}{I|L}SR{I|L}{I|L};[QP]{I|L}S{I|L}{I|L}[VG]{I|L};[QP]{I|L}SR{I|L}{I|L}{I|L};[QP]{I|L}{I|L}S{I|L}R{I|L};[QP]VT{I|L}[VG]{I|L}{I|L} 6.3413;6.0206;5.833;5.5122;5.3545;5.2473;5.0338;4.9884;4.9266;4.8461 -;-;-;-;-;-;-;-;-;- 415 1 2.252 36980.9 1.0 15257 6074 21332 HBL1_DMSO_200M_050219_1,21333 HBL1_DMSO_200M_050219_1,21333,GVIPQISLI True True GVIPQISLI 105.64797 939.58507078886 681166.25 21332.0 ENSG00000114054|ENST00000251654|PCCB;;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;;nc|ENSG00000114054|P05166-2|PCCB 5.304968039194743 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21335 105.66 491.0 241560.0 25 0 42430.0 + 12570 GVIDLIFEKA 10 85 552.8186602366919 1103.6227675401838 2 552.8188354372978 MULTI CID FTMS 0 0 0 21334 170360.265625 0.1884932842249493 30 -0.2719192504882812 1 Unmodified _GVIDLIFEKA_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 65.47368725323818 0.0222277162070287 3 [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA] 10 0 + 92.809 0.0 0.0 8.4095 8.4095 98.085 0.0 0.0 0.0 53.97964828336215 13.77513725768253 13.77513725768253 60.43514370155442 0 1.5356668758921828 2.0 0.7302046884880937 0.6505149978319906 + + [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA];[VG]{I|L}[{M(Oxidation (M))|F}V]AKE{[QN]|[E{I|L}]|[KN]};[VG]{I|L}[{M(Oxidation (M))|F}V]A{I|L}[SG]{[QN]|[E{I|L}]|[KN]};R{I|L}[{M(Oxidation (M))|F}V]{[QS]|[NT]}R[KA];[VG]{I|L}[{M(Oxidation (M))|F}V]{[QS]|[NT]}{I|L}{[QN]|[E{I|L}]|[KN]};[VG]{I|L}[{M(Oxidation (M))|F}V]A{I|L}[VG]{[ET]|[MV]};R{I|L}[{M(Oxidation (M))|F}V]A[SG]R[KA];[VG]{I|L}[{M(Oxidation (M))|F}V]A[SG]{I|L}{[QN]|[E{I|L}]|[KN]} 8.4095;2.9334;2.4531;2.2231;2.2011;2.1197;2.1099;2.0919 +;-;-;-;-;-;-;- + 890 + 1 2.252 97135.0 1.0 15258 6075 21334 HBL1_DMSO_200M_050219_1,21335 HBL1_DMSO_200M_050219_1,21335,GVIDLIFEKA True True GVIDLIFEKA 105.65919 552.818835437298 27919604.0 21334.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 8.985661188761393 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21336 105.67 800.0 111030.0 25 0 4326.6 -1 0 108 872.4176512922425 3485.6414993025696 4 872.6688110232353 MULTI CID FTMS 0 0 0 21334 83434.5078125 1.0 0 0.0 2 3 [YQ]{I|L} 3 -1 33.244 0.0 0.0 0.95375 0.0 0.0 0.0 3078.41213463876 3078.41213463876 21.77362719830313 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.3807196863200844 [YQ]{I|L} 0.95375 - 93 1 2.252 60024.8 0.2899999916553497 15259 6075 21334 HBL1_DMSO_200M_050219_1,21336 HBL1_DMSO_200M_050219_1,21336, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21339 105.69 800.0 189860.0 25 0 31314.0 + 41314 VPIFPQPLI 9 103 1023.6234653048635 1022.6161888382636 1 1023.633288562298 MULTI CID FTMS 0 0 0 21338 78232.9921875 0.3820861171855254 -55 0.6847457885742188 1 Unmodified _VPIFPQPLI_ ENSG00000164896|ENST00000297532|FASTK;ENST00000460980.5_1_7:150773814-150775027:-|nuORF;ENST00000466855.1_1_7:150774601-150775027:-|nuORF;ENST00000467237.5_1_7:150774601-150776190:-|nuORF;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;nc|ENSG00000164896|Q14296-4|FASTK 64.23631603340823 0.0237365939569086 3 [{I|L}P]V{M(Oxidation (M))|F}PQP{I|L}{I|L} 9 2 + 69.509 0.0 0.0 6.7972 6.7972 82.309 0.0 0.0 0.0 18.010299956639813 16.478174818886373 16.478174818886373 2.4865124202832334 0 1.6989700043360187 1.5228787452803376 0.0 0.0 [{I|L}P]V{M(Oxidation (M))|F}PQP{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}VPQP{I|L}{I|L};[{I|L}P]V{M(Oxidation (M))|F}P[AG]P{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}VP[AG]P{I|L}{I|L};[QP]P{I|L}{M(Oxidation (M))|F}VP{I|L}{I|L};[{I|L}P]V{[WS]|[C(Carbamidomethyl (C)){I|L}]}VP{I|L}{I|L};[VP]{I|L}{M(Oxidation (M))|F}PQP{I|L}{I|L};[{I|L}P]NKTQP{I|L}{I|L};[{I|L}P]{I|L}QMVP{I|L}{I|L};[QP]VKTQP{I|L}{I|L} 6.7972;6.554;5.8967;5.6535;5.036;5.0148;5.0136;4.7161;4.5694;4.5439 -;-;-;-;-;-;+;-;-;- + 1263 1 2.252 101394.8 0.7900000214576721 15260 6077 21338 HBL1_DMSO_200M_050219_1,21339 HBL1_DMSO_200M_050219_1,21339,VPIFPQPLI True True VPIFPQPLI 105.69334 1023.6332885623 12293943.75 21338.0 nc|ENSG00000164896|Q14296-4|FASTK;;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;;nc|ENSG00000164896|Q14296-3|FASTK;;ENSG00000164896|ENST00000297532|FASTK;;ENST00000466855.1_1_7:150774601-150775027:-|nuORF;;ENST00000460980.5_1_7:150773814-150775027:-|nuORF;;nc|ENSG00000164896|Q14296-2|FASTK;;ENST00000467237.5_1_7:150774601-150776190:-|nuORF 7.08841594060262 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21343 105.72 800.0 128260.0 25 0 19066.0 + 41315 VPIFPQPLI 9 85 512.3154915686347 1022.6164302040694 2 512.3154174685478 MULTI CID FTMS 0 0 0 21342 68882.2421875 0.1549634190503555 -18 0.1757965087890625 1 Unmodified _VPIFPQPLI_ ENSG00000164896|ENST00000297532|FASTK;ENST00000460980.5_1_7:150773814-150775027:-|nuORF;ENST00000466855.1_1_7:150774601-150775027:-|nuORF;ENST00000467237.5_1_7:150774601-150776190:-|nuORF;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;nc|ENSG00000164896|Q14296-4|FASTK 49.66892048692302 0.0410958345688192 3 [{I|L}P]{M(Oxidation (M))|F}VPQP{I|L}{I|L} 9 2 + 70.908 0.0 0.0 6.934 6.934 87.266 0.0 0.0 0.0 20.49218022670182 20.457574905606748 20.457574905606748 6.020599913279625 0 1.1237125054200234 2.0 0.0 0.3807196863200844 [{I|L}P]{M(Oxidation (M))|F}VPQP{I|L}{I|L};[{I|L}P]V{M(Oxidation (M))|F}PQP{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}VP[AG]P{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}[QP]VP{I|L}{I|L};[{I|L}P]V{M(Oxidation (M))|F}P[AG]P{I|L}{I|L};[{I|L}P][QP]{M(Oxidation (M))|F}VP{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}N[{I|L}P]P{I|L}{I|L};[VP]{I|L}{M(Oxidation (M))|F}PQP{I|L}{I|L};[{I|L}P][QP]V{M(Oxidation (M))|F}P{I|L}{I|L};[QP]P{I|L}{M(Oxidation (M))|F}VP{I|L}{I|L} 6.934;6.3452;5.6612;5.2226;5.0725;5.0116;5.0056;4.9301;4.7173;4.5994 -;-;-;-;-;-;-;+;-;- + 374 1 2.252 100808.0 0.5 15261 6080 21342 HBL1_DMSO_200M_050219_1,21343 HBL1_DMSO_200M_050219_1,21343,VPIFPQPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21344 105.73 800.0 272090.0 25 0 19736.0 + + 11642 AVVGDLLEL 9 133 928.54159277288 927.53431630628 1 928.5355712771416 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _GLARNRKN_ nc|ENSG00000160856|Q96P31-3|FCRL3;nc|ENSG00000160856|Q96P31-2|FCRL3;nc|ENSG00000143297|Q96RD9-3|FCRL5;ENSG00000160856|ENST00000368184|FCRL3;ENST00000473231.5_1_1:157648502-157666139:-|nuORF;nc|ENSG00000160856|Q96P31-6|FCRL3;ENSG00000143297|ENST00000361835|FCRL5;nc|ENSG00000160856|Q96P31-7|FCRL3 13.50788311687929 0.7113601687236069 3 {[VA]|[{I|L}G]}DVAV{I|L}E{I|L} 9 -1 + 56.765 0.0 0.0 6.12 6.12 77.236 0.0 0.0 0.0 6.862066933883511 15.234615020224716 6.862066933883511 0.6694678963061307 0 0.4247425010840047 1.0969100130080565 1.124803706770636 0.0 {[VA]|[{I|L}G]}DVAV{I|L}E{I|L};{[VA]|[{I|L}G]}VDAV{I|L}E{I|L};{[VA]|[{I|L}G]}DVA{I|L}VE{I|L};{[VA]|[{I|L}G]}DR{I|L}{I|L}E{I|L};{[VA]|[{I|L}G]}VDA{I|L}VE{I|L};{[VA]|[{I|L}G]}DVG{I|L}{I|L}E{I|L};{[VA]|[{I|L}G]}VDG{I|L}{I|L}E{I|L};{[VA]|[{I|L}G]}DVA{I|L}EV{I|L};{[VA]|[{I|L}G]}VDA{I|L}EV{I|L};{[QN]|[E{I|L}]|[KN]}RGV{I|L}E{I|L} 6.12;6.0478;5.8616;5.8092;5.7895;5.6687;5.5965;5.5034;5.4312;5.3802 -;-;-;-;-;-;-;-;-;- 5399 1 2.252 142470.7 0.6399999856948853 15262 6080 21342 HBL1_DMSO_200M_050219_1,21344 HBL1_DMSO_200M_050219_1,21344,GLARNRKN False False AVVGDLLEL 105.73153 928.535571277142 2038535.75 21342.0 nc|ENSG00000160856|Q96P31-3|FCRL3;;nc|ENSG00000160856|Q96P31-2|FCRL3;;nc|ENSG00000143297|Q96RD9-3|FCRL5;;ENSG00000160856|ENST00000368184|FCRL3;;ENST00000473231.5_1_1:157648502-157666139:-|nuORF;;nc|ENSG00000160856|Q96P31-6|FCRL3;;ENSG00000143297|ENST00000361835|FCRL5;;nc|ENSG00000160856|Q96P31-7|FCRL3 2.328887542088826 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21345 105.74 463.0 30244.0 25 0 1978.1 -1 0 42 1066.207080066204 0 1066.207080066204 PEAK CID FTMS 0 0 0 -1 0 3 3 W 1 -1 4.6041 0.0 0.0 0.21611 0.0 0.0 1422.0629505603397 519.2517183893186 1941.314668949658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.21611 - 11 + 1 2.252 23732.3 1.0 15263 6080 21342 HBL1_DMSO_200M_050219_1,21345 HBL1_DMSO_200M_050219_1,21345, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21346 105.75 800.0 82087.0 25 0 7873.4 + 18762 LAMELLLR 8 73 479.7914475000858 0 479.7914001345634 PEAK CID FTMS 0 0 0 21342 115279.1328125 0.2780050588957261 25 -0.2185821533203125 4 Unmodified _LAMELLLR_ REV__ENST00000521033.5_1_5:160061154-160212677:-|nuORF 46.92087301778293 0.1150065695079723 3 A{I|L}E{I|L}{I|L} 5 -1 39.068 0.0 0.0 4.0799 0.0 0.0 131.03823277208238 284.1739901178344 415.2122228899168 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 A{I|L}E{I|L}{I|L} 4.0799 - 71 + 1 2.252 57276.1 0.5299999713897705 15264 6080 21342 HBL1_DMSO_200M_050219_1,21346 HBL1_DMSO_200M_050219_1,21346,LAMELLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21354 105.79 800.0 64936.0 25 0 3475.8 -1 0 124 901.2037231326104 0 901.2037231326104 PEAK CID FTMS 0 0 0 -1 0 1 3 A 1 -1 6.9897 0.0 0.0 0.38823 0.0 0.0 1594.2870563953002 132.04586206607658 1726.3329184613767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.38823 - 15 + 1 2.252 40142.1 0.3799999952316284 15265 6087 21353 HBL1_DMSO_200M_050219_1,21354 HBL1_DMSO_200M_050219_1,21354, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21355 105.8 501.0 150500.0 25 0 31939.0 + 44288 YLLPAIVHI 9 72 1038.6344607342714 1037.6271842676715 1 1038.634692370892 MULTI CID FTMS 0 0 0 21353 78833.03125 0.103102158009458 35 -0.2521820068359375 2 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 56.04830969593885 0.0282699710924866 3 {I|L}Y{I|L}[PA]{I|L}VH{I|L} 9 2 + 51.193 0.0 0.0 4.9337 4.9337 82.402 0.0 0.0 0.0 33.005756001258604 6.495521576853918 6.495521576853918 7.786596949921218 0 2.1861818737241734 0.0 0.0 0.0 {I|L}Y{I|L}[PA]{I|L}VH{I|L};[Y{I|L}][PA]{I|L}{I|L}VH{I|L};[Y{I|L}][PA]{I|L}V{I|L}H{I|L};[Y{I|L}]V{I|L}[PA]{I|L}H{I|L};[Y{I|L}]V[PA]{I|L}{I|L}H{I|L};[Y{I|L}][PA]V{I|L}{I|L}H{I|L};[Y{I|L}][PA]{I|L}VH{I|L}{I|L};[Y{I|L}]V{I|L}[PA]H{I|L}{I|L};[Y{I|L}]V[PA]{I|L}H{I|L}{I|L};[Y{I|L}][PA]V{I|L}H{I|L}{I|L} 4.9337;4.1833;3.8711;3.718;2.9681;2.7543;2.6393;2.4862;1.7363;1.5225 -;-;-;-;-;-;-;-;-;- 270 + 1 2.252 57066.9 1.0 15266 6087 21353 HBL1_DMSO_200M_050219_1,21355 HBL1_DMSO_200M_050219_1,21355,YLLPAIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21357 105.81 458.0 250180.0 25 0 13192.0 -1 0 125 857.066465869744 2568.177568209432 3 857.4011718630791 MULTI CID FTMS 0 0 0 21356 187257.015625 0.3502072410465848 33 -0.2228469848632812 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 55.812 0.0 0.0 2.1732 0.0 0.0 0.0 1527.568486612941 1527.568486612941 40.32755608235508 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.1732 - 825 1 2.252 81528.1 1.0 15267 6088 21356 HBL1_DMSO_200M_050219_1,21357 HBL1_DMSO_200M_050219_1,21357, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21360 105.83 800.0 111440.0 25 0 19146.0 25344 NALPALLI 8 81 824.5242458212713 823.5169693546712 1 824.5237914919853 MULTI CID FTMS 0 0 0 21359 53398.84765625 0.4718626363532747 -4 0.0438995361328125 1 Unmodified _NALPALLI_ ENSG00000136940|ENST00000259467|PDCL;nc|ENSG00000136940|Q13371-2|PDCL 63.562846038646086 0.116059504757595 3 {[QG]|[NA]}{I|L}PA{I|L}{I|L}{I|L} 8 0 + 66.552 0.0 0.0 8.0815 8.0815 95.315 0.0 0.0 0.0 14.018637558036673 16.40978057358332 14.018637558036673 14.018637558036673 0 1.2134679910804405 0.0 0.0 1.2302046884880935 + + {[QG]|[NA]}{I|L}PA{I|L}{I|L}{I|L};[{I|L}P]ANA{I|L}{I|L}{I|L};{[QG]|[NA]}{I|L}P{I|L}A{I|L}{I|L};[{I|L}P]A{I|L}NA{I|L}{I|L};[{I|L}P]QQ{I|L}{I|L}{I|L};[{I|L}P]AN{I|L}A{I|L}{I|L};[{I|L}P]A{I|L}{I|L}AN{I|L};[{I|L}P]AGGA{I|L}{I|L}{I|L};{I|L}{I|L}[PA]NA{I|L}{I|L};[{I|L}P]A{I|L}GGA{I|L}{I|L} 8.0815;6.3792;6.0564;5.0851;4.4206;4.3541;4.0243;3.7606;3.5393;2.9824 +;-;-;-;-;-;-;-;-;- + 320 1 2.252 68301.8 0.3000000119209289 15268 6090 21359 HBL1_DMSO_200M_050219_1,21360 HBL1_DMSO_200M_050219_1,21360,NALPALLI True True ANLPALLL 105.83397 824.523791491985 719643.0625 21359.0 nc|ENSG00000064687|Q8IZY2-2|ABCA7;;ENSG00000064687|ENST00000263094|ABCA7 4.762977123260498 1.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21363 105.86 800.0 129510.0 25 0 8961.2 + 35855 SVLESLVEI 9 89 988.5563128145506 987.5490363479504 1 988.5569335818292 MULTI CID FTMS 0 0 0 21362 115634.78125 0.4729444044002348 -2 0.0204620361328125 1 Unmodified _SVLESLVEI_ ENSG00000137040|ENST00000259569|RANBP6 100.37149154755038 0.0107586824602606 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}SS{I|L}VE{I|L} 9 2 + 79.07 0.0 0.0 8.0067 8.0067 81.353 0.0 0.0 0.0 0.5115252244738144 16.478174818886373 0.5115252244738144 0.1849178312658494 0 0.5994850021680094 1.6989700043360187 2.305462187404089 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}SS{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}TVS{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}VSS{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}SVS{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}S{I|L}SVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}TV{I|L}SVE{I|L};{[QN]|[E{I|L}]|[KN]}VS{I|L}SVE{I|L};{[QN]|[E{I|L}]|[KN]}SV{I|L}SVE{I|L};{[TV]|[{I|L}S]}VES{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}SSV{I|L}E{I|L} 8.0067;7.9879;7.9549;7.9361;7.8916;7.8729;7.8398;7.8211;7.4598;7.3466 -;-;-;-;-;-;-;-;-;- 2975 1 2.252 72281.3 0.3600000143051147 15269 6092 21362 HBL1_DMSO_200M_050219_1,21363 HBL1_DMSO_200M_050219_1,21363,SVLESLVEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21367 105.88 800.0 37165.0 25 0 1299.4 -1 0 67 1095.513842761517 0 1095.513842761517 PEAK CID FTMS 0 0 0 -1 0 1 3 V 1 -1 5.4846 0.0 0.0 0.25055 0.0 0.0 1230.402733275184 856.5312594049436 2086.933992680128 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.25055 - 11 + 1 2.252 26640.9 0.4300000071525574 15270 6095 21366 HBL1_DMSO_200M_050219_1,21367 HBL1_DMSO_200M_050219_1,21367, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21370 105.89 279.0 234810.0 25 0 33529.0 + 44284 YLLPAIVHI 9 58 519.8210361753863 1037.6275194175726 2 519.8210937380791 MULTI CID FTMS 0 0 0 21369 187811.734375 0.0833989541922785 53 -0.4162139892578125 1 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 45.7499826716795 0.0496882803020414 3 [Y{I|L}]{I|L}PA{I|L}V[H{I|L}] 9 0 + 50.811 0.0 0.0 4.8968 4.8968 85.482 0.0 0.0 0.0 25.616742845273063 1.0037936460156516 1.0037936460156516 11.938200260161118 0 0.75 2.0 0.0 0.0 + + [Y{I|L}]{I|L}PA{I|L}V[H{I|L}];[Y{I|L}]{I|L}{I|L}[PA]V[H{I|L}];[PA]{I|L}VH{I|L}{I|L}[Y{I|L}];[PA]{I|L}V{I|L}H{I|L}[Y{I|L}];[H{I|L}]V[PA]{I|L}{I|L}[Y{I|L}];[HV]{I|L}[PA]{I|L}{I|L}[Y{I|L}] 4.8968;3.7463;2.4163;1.7426;1.3633;0.6092 +;-;-;-;-;- + 164 + 1 2.252 54972.3 1.0 15271 6097 21369 HBL1_DMSO_200M_050219_1,21370 HBL1_DMSO_200M_050219_1,21370,YLLPAIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21384 105.96 800.0 95474.0 25 0 14985.0 + 12571 GVIDLIFEKA 10 88 552.8186602366919 1103.6227675401838 2 552.8193237185478 MULTI CID FTMS 0 0 0 21383 91389.4375 0.1011168605228907 65 -0.7453536987304688 1 Unmodified _GVIDLIFEKA_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 57.24910588100465 0.0438022649904578 3 [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA] 10 0 + 87.823 0.0 0.0 7.9577 7.9577 97.744 0.0 0.0 0.0 49.51544993495972 10.522562268522575 10.522562268522575 87.82251573369031 0 1.5356668758921828 2.0 0.3807196863200844 0.3252574989159953 + + [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA] 7.9577 + + 388 + 1 2.252 64998.9 0.800000011920929 15272 6110 21383 HBL1_DMSO_200M_050219_1,21384 HBL1_DMSO_200M_050219_1,21384,GVIDLIFEKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21386 105.96 136.0 347540.0 25 0 47236.0 + 1103 AGPFPLVLPL 10 64 512.3154915686347 1022.6164302040694 2 512.3154174685478 MULTI CID FTMS 0 0 0 21385 382107.875 0.8596227543651467 13 -0.081268310546875 1 Unmodified _AGPFPLVLPL_ REV__ENST00000368020.5_1_1:161009295-161009403:-|nuORF 18.13498045792455 0.5432546531930572 3 [{I|L}P]{M(Oxidation (M))|F}V 4 -1 28.416 0.0 0.0 2.7788 0.0 0.0 0.0 563.3196377800326 563.3196377800326 12.931825014007217 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P]{M(Oxidation (M))|F}V 2.7788 - 91 1 2.252 49959.9 1.0 15273 6111 21385 HBL1_DMSO_200M_050219_1,21386 HBL1_DMSO_200M_050219_1,21386,AGPFPLVLPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21390 105.98 233.0 588030.0 25 0 85376.0 + 24013 LVYEAIIMV 9 84 1050.59010315948 1049.58282669288 1 1050.590624988079 MULTI CID FTMS 0 0 0 21389 304993.46875 0.4307537106740142 -36 0.2765350341796875 1 Unmodified _LVYEAIIMV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 60.38955033654506 0.025866396858536 3 [{I|L}V]YEA{I|L}{I|L}MV 9 0 + 72.729 0.0 0.0 6.9293 6.9293 82.808 0.0 0.0 0.0 2.573805956708753 16.47817481888638 2.573805956708753 2.573805956708753 0 0.6421590589602533 1.3979400086720375 0.850576203518622 0.0 + + [{I|L}V]YEA{I|L}{I|L}MV;[YE]A{I|L}V{I|L}{I|L}MV;[{I|L}V]AEY{I|L}{I|L}MV;[{I|L}V]YEA{I|L}M{I|L}V;{[CP]|[EA]}Y{I|L}V{I|L}{I|L}MV;[YE]AV{I|L}{I|L}{I|L}MV;[{I|L}V]AE{I|L}Y{I|L}MV;[YE]A{I|L}{I|L}V{I|L}MV;[{I|L}V]A{I|L}EY{I|L}MV;[{M(Oxidation (M))|F}T]D{I|L}V{I|L}M{I|L}V 6.9293;6.6841;6.6464;6.2798;6.2295;6.2295;6.139;6.1063;6.1013;6.0564 +;-;-;-;-;-;-;-;-;- + 2347 1 2.252 92047.2 1.0 15274 6114 21389 HBL1_DMSO_200M_050219_1,21390 HBL1_DMSO_200M_050219_1,21390,LVYEAIIMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21394 106.0 800.0 55458.0 25 0 3873.1 -1 0 69 869.4124874951161 2605.215633085548 3 869.4136230349541 MULTI CID FTMS 0 0 0 21393 50562.734375 0.6279247068210625 21 -0.1551284790039062 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 53.822 0.0 0.0 2.0659 0.0 0.0 0.0 1564.6039510883531 1564.6039510883531 30.43305028184122 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.0659 - 161 1 2.252 39087.7 0.3100000023841858 15275 6117 21393 HBL1_DMSO_200M_050219_1,21394 HBL1_DMSO_200M_050219_1,21394, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21398 106.03 800.0 152930.0 25 0 23556.0 + 38867 TVIVMVGLP 9 81 928.552304203316 927.545027736716 1 928.5545532107352 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _TVIVMVGLP_ ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3 36.04419817259434 0.0971720506436186 3 {I|L}SV[PG]{I|L} 6 6 37.128 0.0 0.0 4.0028 0.0 0.0 343.1931019513688 0.0 343.1931019513688 0.0 6.694699959806982 0.0 0.0 0 0.8494850021680094 0.0 0.9247425010840048 0.0 {I|L}SV[PG]{I|L} 4.0028 - 494 1 2.252 89051.5 0.6299999952316284 15276 6120 21397 HBL1_DMSO_200M_050219_1,21398 HBL1_DMSO_200M_050219_1,21398,TVIVMVGLP True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21409 106.08 800.0 153340.0 25 0 8624.6 1810 ALTCALGLL 9 99 931.530461072736 930.5231846061358 1 931.5272704958916 MULTI CID FTMS 0 0 0 21408 84472.8671875 0.2960041442940563 36 -0.524505615234375 1 Carbamidomethyl (C) _ALTC(Carbamidomethyl (C))ALGLL_ ENSG00000204070|ENST00000243918|SYS1;ENST00000457307.1_1_20:43994210-43995752:+|nuORF 85.35673624503755 0.0162188719545379 3 [{I|L}A]TC(Carbamidomethyl (C))A{I|L}{I|L}G{I|L} 9 2 + 75.911 0.0 0.0 8.1579 8.1579 90.678 0.0 0.0 0.0 10.357441730892276 14.973024840566474 10.357441730892276 6.622119270932245 0 0.805462187404089 1.0969100130080565 1.850576203518622 0.0 [{I|L}A]TC(Carbamidomethyl (C))A{I|L}{I|L}G{I|L};[{I|L}A]TC(Carbamidomethyl (C)){I|L}A{I|L}G{I|L};[{I|L}A]T[CG]A{I|L}{I|L}G{I|L};[{I|L}A]TC(Carbamidomethyl (C))A{I|L}G{I|L}{I|L};[{I|L}A]VSGMA{I|L}G{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GMA{I|L}{I|L}G{I|L};[{I|L}A]VC[TA]A{I|L}G{I|L};{[TV]|[{I|L}S]}NMA{I|L}{I|L}G{I|L};[{I|L}A]VSGAM{I|L}G{I|L};{[TV]|[{I|L}S]}GGMA{I|L}{I|L}G{I|L} 8.1579;7.4463;7.1683;7.1599;7.0772;7.0448;6.9731;6.9654;6.9429;6.9106 -;-;-;+;-;-;-;-;-;- + 4321 1 2.252 83921.4 0.8500000238418579 15277 6130 21408 HBL1_DMSO_200M_050219_1,21409 HBL1_DMSO_200M_050219_1,21409,ALTCALGLL True False AIMGSGILGL 106.07828 931.527270495892 1800039.0 21408.0 ENSG00000139974|ENST00000267488|SLC38A6;;ENST00000532148.5_1_14:61447983-61468748:+|nuORF;;ENSG00000188338|ENST00000614032|SLC38A3;;ENSG00000111371|ENST00000398637|SLC38A1;;ENSG00000139209|ENST00000266579|SLC38A4;;nc|ENSG00000139974|Q8IZM9-2|SLC38A6;;ENSG00000017483|ENST00000620913|SLC38A5;;ENST00000497336.1_1_X:48316945-48325440:-|nuORF;;nc|ENSG00000017483|Q8WUX1-2|SLC38A5;;ENST00000529345.6_1_14:61448346-61550389:+|nuORF 5.972122987111409 1.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21412 106.09 281.0 274020.0 25 0 67030.0 + 33489 SIIGRLLEV 9 76 500.3136029783879 998.6126530235758 2 500.3134948611259 MULTI CID FTMS 0 0 0 21411 193355.40625 0.0250512988252649 -17 0.1053314208984375 1 Unmodified _SIIGRLLEV_ ENSG00000172531|ENST00000376745|PPP1CA 43.9818466556824 0.0535980856389242 3 {I|L}S{I|L}{I|L}EV 6 4 37.414 0.0 0.0 3.7466 0.0 0.0 326.2054920880875 0.0 326.2054920880875 0.0 23.677222137369185 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 {I|L}S{I|L}{I|L}EV 3.7466 - 102 1 2.252 61995.5 1.0 15278 6132 21411 HBL1_DMSO_200M_050219_1,21412 HBL1_DMSO_200M_050219_1,21412,SIIGRLLEV True True SIIGRLLEV 106.08987 500.313494861126 225039520.0 21411.0 ENSG00000172531|ENST00000376745|PPP1CA 5.183178265889485 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21413 106.09 277.0 195140.0 25 0 16979.0 + 12664 GVLKVFLENV 10 86 559.3345547256041 1116.654556518008 2 559.3347045779228 MULTI CID FTMS 0 0 0 21411 103831.4765625 0.1368017724984817 -17 0.1053314208984375 2 Unmodified _GVLKVFLENV_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 29.081581746732265 0.3152867722954398 3 [VG][{I|L}V]K{M(Oxidation (M))|F}{I|L}E{[NV]|[RG]} 10 2 + 36.589 0.0 0.0 3.2767 3.2767 77.077 0.0 0.0 0.0 8.976949551052371 22.94408732588998 8.976949551052371 6.989700043360188 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [VG][{I|L}V]K{M(Oxidation (M))|F}{I|L}E{[NV]|[RG]};[VG][{I|L}V]{M(Oxidation (M))|F}K{I|L}E{[NV]|[RG]};[{M(Oxidation (M))|F}V][VG]{I|L}K{I|L}E{[NV]|[RG]};[{M(Oxidation (M))|F}V]K{I|L}[VG]{I|L}E{[NV]|[RG]};[{M(Oxidation (M))|F}V]K{I|L}{I|L}[VG]E{[NV]|[RG]};[{M(Oxidation (M))|F}V]K{I|L}{I|L}E[VG]{[NV]|[RG]};[{M(Oxidation (M))|F}V]KN{I|L}KR{[NV]|[RG]} 3.2767;2.6507;1.4966;0.99839;0.57111;0.30153;0.22786 -;-;-;-;-;-;- 455 1 2.252 52354.5 1.0 15279 6132 21411 HBL1_DMSO_200M_050219_1,21413 HBL1_DMSO_200M_050219_1,21413,GVLKVFLENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21416 106.12 800.0 125030.0 25 0 19329.0 + 13856 HVIDYILDL 9 102 550.802970177901 1099.591387422602 2 550.8029052615166 MULTI CID FTMS 0 0 0 21415 88165.71875 0.5418485518295172 -4 0.03717041015625 1 Unmodified _HVIDYILDL_ ENSG00000115738|ENST00000396290|ID2;ENSG00000172201|ENST00000378700|ID4;ENST00000462623.1_1_3:62109880-62110168:-|nuORF 74.42276476219924 0.019389277360085 3 [HV]{I|L}DY{I|L}{I|L}D{I|L} 9 0 + 79.09 0.0 0.0 7.1927 7.1927 80.507 0.0 0.0 0.0 0.72051538364164 16.478174818886373 0.72051538364164 0.72051538364164 0 1.274227503252014 1.3010299956639813 0.3494850021680094 0.0 + + [HV]{I|L}DY{I|L}{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}YHV{I|L}{I|L}D{I|L};[HV]{I|L}D{I|L}Y{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}YH{I|L}V{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]Y{I|L}{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}HV{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}YH{I|L}{I|L}VD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}Y{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}VH{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}YHV{I|L}D{I|L} 7.1927;7.1272;6.8348;6.6933;6.2873;6.1458;5.9415;5.9294;5.8111;5.5982 +;-;-;-;-;-;-;-;-;- + 634 1 2.252 83216.4 0.3899999856948852 15280 6134 21415 HBL1_DMSO_200M_050219_1,21416 HBL1_DMSO_200M_050219_1,21416,HVIDYILDL True True HVIDYILDL 106.11543 550.802905261517 890724.875 21415.0 ENSG00000115738|ENST00000396290|ID2;;ENSG00000172201|ENST00000378700|ID4;;ENST00000462623.1_1_3:62109880-62110168:-|nuORF 6.130309263865153 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21420 106.14 547.0 250280.0 25 0 15946.0 + 26453 NTIDILTAI 9 91 973.5543583252808 972.5470818586808 1 973.5570556521416 MULTI CID FTMS 0 0 0 21419 157899.203125 0.6902414518530662 -12 0.081634521484375 1 Unmodified _NTIDILTAI_ ENSG00000087470|ENST00000549701|DNM1L;nc|ENSG00000087470|O00429-2|DNM1L;nc|ENSG00000087470|O00429-3|DNM1L;nc|ENSG00000087470|O00429-4|DNM1L;nc|ENSG00000087470|O00429-5|DNM1L;nc|ENSG00000087470|O00429-6|DNM1L;nc|ENSG00000087470|O00429-7|DNM1L;nc|ENSG00000087470|O00429-8|DNM1L;nc|ENSG00000087470|O00429-9|DNM1L 134.295615338601 0.0119261337544952 3 {[QS]|[NT]}{I|L}D{I|L}{I|L}TA{I|L} 9 0 + 105.95 0.0 0.0 10.894 10.894 97.168 0.0 0.0 0.0 17.811894545657196 13.46787486224656 13.46787486224656 13.577184142563468 0 0.6307196863200843 1.154901959985743 3.024227503252014 1.578542181343484 + + {[QS]|[NT]}{I|L}D{I|L}{I|L}TA{I|L};{[QS]|[NT]}{I|L}D{I|L}T{I|L}A{I|L};{[QS]|[NT]}{I|L}D{I|L}TA{I|L}{I|L};[{I|L}T]ND{I|L}{I|L}TA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}TD{I|L}{I|L}TA{I|L};[{I|L}T]DN{I|L}{I|L}TA{I|L};[{I|L}T]ND{I|L}T{I|L}A{I|L};[{I|L}T]ND{I|L}TA{I|L}{I|L};[{I|L}T]D{I|L}N{I|L}TA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}TD{I|L}T{I|L}A{I|L} 10.894;9.4976;9.1324;9.0621;8.3434;8.0064;7.6661;7.3009;7.0956;6.9474 +;-;-;-;-;-;-;-;-;- + 3114 1 2.252 94085.2 1.0 15281 6137 21419 HBL1_DMSO_200M_050219_1,21420 HBL1_DMSO_200M_050219_1,21420,NTIDILTAI True True NTIDILTAI 106.13557 973.557055652142 2160674.25 21419.0 nc|ENSG00000087470|O00429-5|DNM1L;;nc|ENSG00000087470|O00429-6|DNM1L;;nc|ENSG00000087470|O00429-9|DNM1L;;nc|ENSG00000087470|O00429-4|DNM1L;;ENSG00000087470|ENST00000549701|DNM1L;;nc|ENSG00000087470|O00429-3|DNM1L;;nc|ENSG00000087470|O00429-7|DNM1L;;nc|ENSG00000087470|O00429-8|DNM1L;;nc|ENSG00000087470|O00429-2|DNM1L 3.114661931991577 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21421 106.14 231.0 193010.0 25 0 17849.0 -1 0 84 312.16967115258217 622.3247893719644 2 312.1692993044853 MULTI CID FTMS 0 0 0 21419 264450.875 0.3527247084958173 -4 0.0283889770507812 2 3 {M(Oxidation (M))|F} 1 -1 1.9897 0.0 0.0 0.31972 0.0 0.0 385.2359812438378 87.02469049625233 472.2606717400901 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.31972 - 6 + 1 2.252 45938.9 1.0 15282 6137 21419 HBL1_DMSO_200M_050219_1,21421 HBL1_DMSO_200M_050219_1,21421, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21423 106.16 800.0 99676.0 25 0 11340.0 + 44285 YLLPAIVHI 9 91 519.8210361753863 1037.6275194175726 2 519.8209716677666 MULTI CID FTMS 0 0 0 21422 50216.0625 0.0222987509810865 94 -1.0666427612304688 1 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 36.46614268402704 0.0948557732959553 3 [Y{I|L}]{I|L}PA{I|L}V{I|L}H 9 2 + 54.848 0.0 0.0 5.2859 5.2859 81.649 0.0 0.0 0.0 23.77259154210577 5.698753079565613 5.698753079565613 5.698753079565613 0 0.4247425010840047 2.0 0.0 0.0 [Y{I|L}]{I|L}PA{I|L}V{I|L}H;[Y{I|L}]{I|L}PA{I|L}VH{I|L};[Y{I|L}]{I|L}{I|L}[PA]V{I|L}H;[Y{I|L}]{I|L}{I|L}[PA]VH{I|L};[PA]{I|L}VH{I|L}{I|L}Y{I|L};[HV]{I|L}[PA]{I|L}{I|L}Y{I|L};[H{I|L}]V[PA]{I|L}{I|L}Y{I|L} 5.2859;4.7367;4.059;3.5098;2.0711;0.29289;0.067295 -;+;-;-;-;-;- + 210 + 1 2.252 68134.0 0.3700000047683716 15283 6138 21422 HBL1_DMSO_200M_050219_1,21423 HBL1_DMSO_200M_050219_1,21423,YLLPAIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21424 106.17 786.0 121850.0 25 0 10405.0 + 9665 FLPSYIIDV 9 117 533.7951203060285 1065.5756876788569 2 534.2958251833916 MULTI CID FTMS 0 0 0 21422 94797.90625 0.6393613411372436 -8 0.0780258178710937 2 Unmodified _FLPSYIIDV_ ENSG00000071894|ENST00000616140|CPSF1;ENST00000532560.5_1_8:145625727-145626379:-|nuORF 30.22481116460888 0.1466181017706357 3 [PS]Y{I|L}{M(Oxidation (M))|F}{I|L} 6 5 36.262 0.0 0.0 3.4031 0.0 0.0 0.0 342.16971779043814 342.16971779043814 13.030470387547254 0.0 0.0 0.0 0 0.0 0.5086383061657274 1.3807196863200843 0.0 [PS]Y{I|L}{M(Oxidation (M))|F}{I|L} 3.4031 - 646 1 2.252 81020.9 1.0 15284 6138 21422 HBL1_DMSO_200M_050219_1,21424 HBL1_DMSO_200M_050219_1,21424,FLPSYIIDV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21427 106.19 800.0 129430.0 25 0 38112.0 -1 0 90 326.17149156550056 650.3284301978011 2 326.1712524294853 MULTI CID FTMS 0 0 0 21426 40880.640625 0.2936148040447714 1 -0.0315322875976562 1 3 G 1 -1 13.979 0.0 0.0 2.1496 0.0 0.0 575.2955684197723 0.0 575.2955684197723 0.0 12.196663469151312 0.0 0.0 0 0.0 0.0 0.0 0.0 G 2.1496 - 12 + 1 2.252 87662.5 0.5 15285 6140 21426 HBL1_DMSO_200M_050219_1,21427 HBL1_DMSO_200M_050219_1,21427, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21428 106.21 800.0 257220.0 25 0 66555.0 31790 RSREKRRRRRR 11 63 806.5035669928402 1610.9925810524803 2 806.5048705935478 MULTI CID FTMS 0 0 0 21426 92711.6015625 0.4571093730439522 -10 0.112030029296875 2 Unmodified _RSREKRRRRRR_ ENSG00000126461|ENST00000360565|SCAF1 0.0 0.8751479354844584 3 V 1 11 11.99 0.0 0.0 0.74424 0.0 0.0 612.3789456018304 896.5235261350869 1508.9024717369173 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V 0.74424 - 36 + 1 2.252 145219.4 0.8700000047683716 15286 6140 21426 HBL1_DMSO_200M_050219_1,21428 HBL1_DMSO_200M_050219_1,21428,RSREKRRRRRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21431 106.22 227.0 287600.0 25 0 41326.0 + 41316 VPIFPQPLI 9 75 512.3154915686347 1022.6164302040694 2 512.3154174685478 MULTI CID FTMS 0 0 0 21430 219531.640625 0.4938772685183785 44 -0.629150390625 1 Unmodified _VPIFPQPLI_ ENSG00000164896|ENST00000297532|FASTK;ENST00000460980.5_1_7:150773814-150775027:-|nuORF;ENST00000466855.1_1_7:150774601-150775027:-|nuORF;ENST00000467237.5_1_7:150774601-150776190:-|nuORF;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;nc|ENSG00000164896|Q14296-4|FASTK 42.96799951952854 0.0591636306142405 3 [{I|L}P]{M(Oxidation (M))|F}VPQ 6 5 43.421 0.0 0.0 4.2461 0.0 0.0 0.0 338.2079047952598 338.2079047952598 26.25447181216777 0.0 0.0 0.0 0 0.5 2.0 0.0 0.3807196863200844 [{I|L}P]{M(Oxidation (M))|F}VPQ 4.2461 - 241 1 2.252 65822.0 1.0 15287 6142 21430 HBL1_DMSO_200M_050219_1,21431 HBL1_DMSO_200M_050219_1,21431,VPIFPQPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21432 106.22 499.0 232910.0 25 0 144540.0 24052 LWRQRGAG 8 43 472.2654884006633 942.5164238681266 2 472.2654296755791 MULTI CID FTMS 0 0 0 21430 81369.1328125 0.4788089247298184 1 -0.0156326293945312 2 Unmodified _LWRQRGAG_ nc|ENSG00000090615|Q08378-4|GOLGA3 0.7936320650641473 0.8195151834710337 3 {I|L} 1 7 11.42 0.0 0.0 1.2116 0.0 0.0 811.4213291189063 0.0 811.4213291189063 0.0 11.419983281826005 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2116 + + 3 + 1 2.252 95394.6 1.0 15288 6142 21430 HBL1_DMSO_200M_050219_1,21432 HBL1_DMSO_200M_050219_1,21432,LWRQRGAG False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 21434 106.24 800.0 140610.0 25 0 11387.0 + 15505 IPVEFKLVI 9 105 529.3365639048626 1056.658574876525 2 529.3367187380791 MULTI CID FTMS 0 0 0 21433 85384.1796875 0.1905451208293707 -20 0.1912918090820312 1 Unmodified _IPVEFKLVI_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19756233-19756668:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1;nc|ENSG00000105726|Q9HD20-3|ATP13A1 75.76082778847304 0.0188720312721366 3 {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L} 9 0 + 61.952 0.0 0.0 5.863 5.863 90.836 0.0 0.0 0.0 27.87401551688937 8.702199056998268 8.702199056998268 28.635475786178745 0 1.742992819099939 1.5228787452803376 0.3252574989159953 0.0 + + {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L};{I|L}[{I|L}T]{I|L}V{I|L}E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}[{I|L}T]{I|L}V{I|L}C(Carbamidomethyl (C)){I|L}{I|L};{I|L}[{I|L}T]{I|L}V{[WT]|[RM]}V{I|L};{I|L}[{I|L}T]{I|L}{I|L}VC(Carbamidomethyl (C)){I|L}{I|L};{I|L}[{I|L}T]{I|L}{I|L}VE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}[{I|L}T]{I|L}VE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}[{I|L}T]{I|L}{I|L}C(Carbamidomethyl (C)){I|L}V{I|L};{I|L}[{I|L}T]{I|L}{I|L}D{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}[{I|L}T]{I|L}EV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.863;3.153;2.9383;2.914;2.4868;2.4747;2.3532;2.2478;1.6749;1.5567 +;-;-;-;-;-;-;-;-;- + 1023 + 1 2.252 91266.0 0.8799999952316284 15289 6143 21433 HBL1_DMSO_200M_050219_1,21434 HBL1_DMSO_200M_050219_1,21434,IPVEFKLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21437 106.26 600.0 75746.0 25 0 5085.3 -1 0 90 857.0668276112092 2568.1786534338275 3 857.4033691287041 MULTI CID FTMS 0 0 0 21436 18208.814453125 0.2043676691758331 1 -0.0130538940429687 1 3 [H{I|L}]V{[CP]|[EA]}{I|L}Y{I|L}V 9 -1 38.822 0.0 0.0 1.5117 0.0 0.0 0.0 1527.5602201665026 1527.5602201665026 36.05824035816629 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 [H{I|L}]V{[CP]|[EA]}{I|L}Y{I|L}V 1.5117 - 118 1 2.252 39858.4 1.0 15290 6145 21436 HBL1_DMSO_200M_050219_1,21437 HBL1_DMSO_200M_050219_1,21437, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21442 106.29 800.0 90694.0 25 0 4016.2 -1 0 123 1152.214770495892 0 1152.214770495892 PEAK CID FTMS 0 0 0 -1 0 1 3 E{I|L}G 3 -1 7.9806 0.0 0.0 0.34662 0.0 0.0 1333.8877796619029 666.3458956354124 2000.2336752973151 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}G 0.34662 - 250 + 1 2.252 47484.7 0.4799999892711639 15291 6149 21441 HBL1_DMSO_200M_050219_1,21442 HBL1_DMSO_200M_050219_1,21442, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21443 106.3 800.0 272560.0 25 0 13068.0 + 38743 TVADVVLWSV 10 156 1088.5990160653164 1087.5917395987165 1 1088.601489245892 MULTI CID FTMS 0 0 0 21441 152618.453125 0.967479583799529 11 -0.203399658203125 2 Unmodified _TVADVVLWSV_ ENSG00000106305|ENST00000223029|AIMP2;nc|ENSG00000106305|Q13155-2|AIMP2 69.10491478415734 0.0189654488676922 3 [DV]ATVV{I|L}WSV 10 2 + 80.665 0.0 0.0 7.4168 7.4168 80.314 0.0 0.0 0.0 0.2915822874121261 10.128333601982009 0.2915822874121261 0.2915822874121261 0 0.8539171939081173 0.9208187539523752 2.7614393726401687 0.0 [DV]ATVV{I|L}WSV;{[DA]|[EG]}VTVV{I|L}WSV;[DV]AVTV{I|L}WSV;{[DA]|[EG]}VVTV{I|L}WSV;[TP]STVV{I|L}WSV;[DV]VATV{I|L}WSV;[TP]SVTV{I|L}WSV;[{I|L}T][DG]VV{I|L}WSV;[DV]ATV{I|L}VWSV;{[DA]|[EG]}VTV{I|L}VWSV 7.4168;7.39;7.3436;7.3167;7.1318;7.0668;7.0585;7.0348;6.7782;6.7514 -;-;-;-;-;-;-;-;-;- 31361 1 2.252 133613.1 0.6000000238418579 15292 6149 21441 HBL1_DMSO_200M_050219_1,21443 HBL1_DMSO_200M_050219_1,21443,TVADVVLWSV True True TVADVVLWSV 106.30081 1088.60148924589 1542343.875 21441.0 nc|ENSG00000106305|Q13155-2|AIMP2;;ENSG00000106305|ENST00000223029|AIMP2 5.465658028920491 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21446 106.32 800.0 41967.0 25 0 3371.2 -1 0 65 1108.788751930585 0 1108.787158191204 PEAK CID FTMS 0 0 0 21445 12783.416015625 0.1001597663220514 1 -0.0302276611328125 1 3 {I|L}V 2 -1 5.9691 0.0 0.0 0.26942 0.0 0.0 1351.1648318867576 649.2362154596311 2000.4010473463889 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 0.26942 - 18 + 1 2.252 32233.2 0.8799999952316284 15293 6151 21445 HBL1_DMSO_200M_050219_1,21446 HBL1_DMSO_200M_050219_1,21446, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21447 106.33 800.0 128470.0 25 0 52534.0 20780 LLVFYQQALL 10 65 604.3579338229669 1206.7013147127336 2 604.3577148318291 MULTI CID FTMS 0 0 0 21445 127409.5546875 1.0 0 0.0 2 Unmodified _LLVFYQQALL_ ENSG00000116127|ENST00000613296|ALMS1;nc|ENSG00000116127|Q8TCU4-2|ALMS1;nc|ENSG00000116127|Q8TCU4-3|ALMS1 7.910154910731844 0.6900473968920092 3 {I|L}{I|L}V 3 7 15.942 0.0 0.0 1.3211 0.0 0.0 0.0 878.4417376465805 878.4417376465805 3.7236374744834695 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + {I|L}{I|L}V 1.3211 + + 16 1 2.252 81473.5 0.7400000095367432 15294 6151 21445 HBL1_DMSO_200M_050219_1,21447 HBL1_DMSO_200M_050219_1,21447,LLVFYQQALL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21449 106.35 540.0 181610.0 25 0 28769.0 30358 RAGFKAGG 8 80 763.4240737959595 762.4167973293595 1 763.4235107302666 MULTI CID FTMS 0 0 0 21448 92815.3203125 0.8751145606535404 2 -0.0338821411132812 1 Unmodified _RAGFKAGG_ ENSG00000066557|ENST00000370952|LRRC40 0.0 0.8243325171867699 3 {[QN]|[E{I|L}]|[KN]}{I|L}E{M(Oxidation (M))|F}{I|L} 6 8 + 79.121 0.0 0.0 10.378 10.378 95.807 0.0 0.0 0.0 24.01838936139489 14.69273760456403 14.69273760456403 9.30400924012389 0 1.610924374808178 1.6989700043360187 1.5387254899964358 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}E{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}{I|L}{I|L};{I|L}{I|L}EE{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}E]{I|L}E{I|L}{I|L};{I|L}{I|L}E{M(Oxidation (M))|F}E{I|L};[{M(Oxidation (M))|F}E]{I|L}{I|L}E{I|L} 10.378;9.1573;8.7809;8.5572;8.1265;7.9912;7.2274;5.4083;5.4069;4.7539 -;-;-;-;-;-;-;-;-;- 355 1 2.252 74940.8 1.0 15295 6152 21448 HBL1_DMSO_200M_050219_1,21449 HBL1_DMSO_200M_050219_1,21449,RAGFKAGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21450 106.36 800.0 28139.0 25 0 1882.1 -1 0 57 804.1016113162041 0 804.1016113162041 PEAK CID FTMS 0 0 0 -1 0 2 3 S 1 -1 4.6041 0.0 0.0 0.28665 0.0 0.0 1384.087044188269 132.04583154849846 1516.1328757367671 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.28665 - 1 + 1 2.252 24898.8 0.3300000131130218 15296 6152 21448 HBL1_DMSO_200M_050219_1,21450 HBL1_DMSO_200M_050219_1,21450, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21452 106.37 21.0 15239000.0 25 0 3897600.0 + 33490 SIIGRLLEV 9 95 500.3136029783879 998.6126530235758 2 500.3136169314384 MULTI CID FTMS 0 0 0 21451 2725955.75 0.3531772573734237 4 -0.045623779296875 1 Unmodified _SIIGRLLEV_ ENSG00000172531|ENST00000376745|PPP1CA 71.70789743142352 0.0204387454931768 3 {[TV]|[{I|L}S]}{I|L}VN{I|L}{I|L}EV 9 2 {[TV]|[{I|L}S]} + + 53.153 26.976 13.48 5.3227 5.3227 56.793 0.0 0.0 0.0 0.0 15.398356765906122 0.0 0.0 0 2.341129063296272 0.0 1.579689690656103 0.0 {[TV]|[{I|L}S]}{I|L}VN{I|L}{I|L}EV 5.3227 - 1064 + 1 2.252 246701.0 1.0 15297 6153 21451 HBL1_DMSO_200M_050219_1,21452 HBL1_DMSO_200M_050219_1,21452,SIIGRLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21453 106.37 161.0 550870.0 25 0 43863.0 + 12665 GVLKVFLENV 10 120 559.3345547256041 1116.654556518008 2 559.3349487185478 MULTI CID FTMS 0 0 0 21451 284397.375 0.3747039556978312 4 -0.045623779296875 2 Unmodified _GVLKVFLENV_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 75.76082778847304 0.0187510588500744 3 [VG]{I|L}KV{M(Oxidation (M))|F}{I|L}ED 9 2 64.79 0.0 0.0 5.8022 0.0 0.0 0.0 113.0734560942458 113.0734560942458 20.980137174129325 0.0 0.0 0.0 0 1.0994850021680094 2.0 0.3494850021680094 0.0 [VG]{I|L}KV{M(Oxidation (M))|F}{I|L}ED 5.8022 - 4543 1 2.252 72899.7 1.0 15298 6153 21451 HBL1_DMSO_200M_050219_1,21453 HBL1_DMSO_200M_050219_1,21453,GVLKVFLENV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21456 106.39 800.0 76623.0 25 0 2294.8 -1 0 102 855.9261962771416 0 855.9261962771416 PEAK CID FTMS 0 0 0 -1 0 1 3 MW{I|L}D 4 -1 19.46 0.0 0.0 1.1381 0.0 0.0 854.4500965564331 307.1410311334594 1161.5911276898926 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 MW{I|L}D 1.1381 - 76 + 1 2.252 44928.9 0.5299999713897705 15299 6155 21455 HBL1_DMSO_200M_050219_1,21456 HBL1_DMSO_200M_050219_1,21456, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21457 106.4 800.0 63456.0 25 0 2531.2 -1 0 100 1032.063281238079 0 1032.063281238079 PEAK CID FTMS 0 0 0 -1 0 2 3 KAMQD 5 -1 20.688 0.0 0.0 1.0032 0.0 0.0 1147.636314818152 338.1738680475219 1485.8101828656738 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.25 KAMQD 1.0032 - 623 + 1 2.252 40994.6 0.6899999976158142 15300 6155 21455 HBL1_DMSO_200M_050219_1,21457 HBL1_DMSO_200M_050219_1,21457, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21460 106.42 800.0 123080.0 25 0 15741.0 + 16143 ITVGSLIEL 9 84 944.5663868343038 943.5591103677036 1 944.5652953982352 MULTI CID FTMS 0 0 0 21459 83154.5859375 0.6349993291328119 8 -0.1549530029296875 1 Unmodified _ITVGSLIEL_ ENSG00000198879|ENST00000397167|SFMBT2 68.08070601005525 0.0218408846571049 3 S{I|L}{I|L}E{I|L} 5 4 50.31 0.0 0.0 5.3319 0.0 0.0 370.2231922959667 0.0 370.2231922959667 0.0 13.935078169319295 0.0 0.0 0 0.2887254899964357 0.0 1.8494850021680087 0.0 + S{I|L}{I|L}E{I|L} 5.3319 + + 172 1 2.252 71470.7 0.3600000143051147 15301 6157 21459 HBL1_DMSO_200M_050219_1,21460 HBL1_DMSO_200M_050219_1,21460,ITVGSLIEL True False ITVGSLIEL 106.42274 944.565295398235 878001.25 21459.0 ENSG00000198879|ENST00000397167|SFMBT2 5.655007839202881 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21461 106.44 800.0 253010.0 25 0 32187.0 + 33831 SLDVLITL 8 137 873.5288407209964 872.5215642543964 1 873.5298339724541 MULTI CID FTMS 0 0 0 21459 128456.703125 0.167801744485373 -12 0.1610031127929687 2 Unmodified _SLDVLITL_ ENSG00000109618|ENST00000382103|SEPSECS;ENST00000503150.1_1_4:25127403-25156626:-|nuORF;nc|ENSG00000109618|Q9HD40-3|SEPSECS 109.62928328672726 0.0469763173861337 3 [{I|L}V]SD{I|L}{I|L}T{I|L} 8 3 + 79.329 0.0 0.0 9.0919 9.0919 89.6 0.0 0.0 0.0 4.537632942370252 16.409780573583312 4.537632942370252 4.537632942370252 0 1.0387254899964358 0.9208187539523752 1.8129529932484496 0.0 [{I|L}V]SD{I|L}{I|L}T{I|L};{[TV]|[{I|L}S]}DV{I|L}{I|L}T{I|L};[{I|L}V]DS{I|L}{I|L}T{I|L};[{I|L}V]SD{I|L}T{I|L}{I|L};[{I|L}V]SEV{I|L}T{I|L};[{I|L}T]{[CP]|[EA]}{I|L}{I|L}T{I|L};{[DS]|[MA]|[CV]|TT}{I|L}V{I|L}{I|L}T{I|L};{[TV]|[{I|L}S]}VD{I|L}{I|L}T{I|L};[{I|L}V]S{I|L}D{I|L}T{I|L};{[TV]|[{I|L}S]}DV{I|L}T{I|L}{I|L} 9.0919;8.5719;8.2728;8.2374;8.1133;7.9739;7.9623;7.8691;7.7995;7.7174 -;+;-;-;-;-;-;-;-;- + 3387 1 2.252 133214.2 0.449999988079071 15302 6157 21459 HBL1_DMSO_200M_050219_1,21461 HBL1_DMSO_200M_050219_1,21461,SLDVLITL True True SLDVLITL 106.43659 873.529833972454 8073970.0 21459.0 nc|ENSG00000109618|Q9HD40-3|SEPSECS;;ENSG00000109618|ENST00000382103|SEPSECS;;ENST00000503150.1_1_4:25127403-25156626:-|nuORF 1.4628154436747234 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21462 106.45 737.0 137570.0 25 0 41112.0 -1 0 94 749.8777625323612 2995.4819442630446 4 750.3805419802666 MULTI CID FTMS 0 0 0 21459 79171.71875 0.6547729156596676 -3 0.0376510620117187 3 3 PNA{I|L}SA{I|L}SD{I|L}HA[HK] 14 -1 64.767 0.0 0.0 2.1621 0.0 0.0 1522.7026707169955 0.0 1522.7026707169955 0.0 47.59958569894216 0.0 0.0 0 0.3807196863200844 0.0 0.6861818737241735 0.0 PNA{I|L}SA{I|L}SD{I|L}HA[HK] 2.1621 - 1297 + 1 2.252 78595.8 1.0 15303 6157 21459 HBL1_DMSO_200M_050219_1,21462 HBL1_DMSO_200M_050219_1,21462, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21465 106.46 227.0 244070.0 25 0 26033.0 + 14655 IIMLEALERV 10 62 593.8467770912213 1185.6790012492424 2 593.8469116091728 MULTI CID FTMS 0 0 0 21464 137615.1875 0.1468622497285822 -13 0.1948318481445312 1 Unmodified _IIMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 32.037481411007896 0.2488723560272515 3 {I|L}{I|L}M{I|L}EA{[QN]|[E{I|L}]|[KN]}[RV] 10 0 + 75.947 0.0 0.0 6.4054 6.4054 93.626 0.0 0.0 0.0 40.083559388717376 2.543096649567076 2.543096649567076 75.94720941673181 0 0.9247425010840048 2.0 0.0 0.3054621874040891 + + {I|L}{I|L}M{I|L}EA{[QN]|[E{I|L}]|[KN]}[RV] 6.4054 + + 220 + 1 2.252 49210.6 1.0 15304 6159 21464 HBL1_DMSO_200M_050219_1,21465 HBL1_DMSO_200M_050219_1,21465,IIMLEALERV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21466 106.47 800.0 30139.0 25 0 3194.9 -1 0 50 1039.329150378704 0 1039.329150378704 PEAK CID FTMS 0 0 0 -1 0 2 3 D 1 -1 6.9897 0.0 0.0 0.33659 0.0 0.0 1577.4151234907138 381.1786593072876 1958.5937827980013 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.33659 - 3 + 1 2.252 27415.3 0.6499999761581421 15305 6159 21464 HBL1_DMSO_200M_050219_1,21466 HBL1_DMSO_200M_050219_1,21466, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21469 106.48 175.0 454000.0 25 0 42177.0 + 15506 IPVEFKLVI 9 91 529.3365639048626 1056.658574876525 2 529.3365966677666 MULTI CID FTMS 0 0 0 21468 353518.25 0.7889187189965963 -2 0.0247573852539062 1 Unmodified _IPVEFKLVI_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19756233-19756668:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1;nc|ENSG00000105726|Q9HD20-3|ATP13A1 86.33184430468982 0.0159826143231117 3 {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L} 9 0 + 70.824 0.0 0.0 6.7026 6.7026 85.681 0.0 0.0 0.0 19.04737847600778 4.954809930719719 4.954809930719719 4.954809930719719 0 2.24607625286837 1.3979400086720375 0.6861818737241735 0.0 + + {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L};[VP]E{M(Oxidation (M))|F}K{I|L}V{I|L}{I|L};[VP]E{M(Oxidation (M))|F}K{I|L}{I|L}V{I|L};[VP]E{M(Oxidation (M))|F}{I|L}KV{I|L}{I|L};[VP]E{M(Oxidation (M))|F}{I|L}K{I|L}V{I|L};[{I|L}P]D{M(Oxidation (M))|F}K{I|L}V{I|L}{I|L};[{I|L}P]D{M(Oxidation (M))|F}K{I|L}{I|L}V{I|L};[{I|L}P]D{M(Oxidation (M))|F}{I|L}KV{I|L}{I|L};[{I|L}P]D{M(Oxidation (M))|F}{I|L}K{I|L}V{I|L};[VP]E{I|L}{M(Oxidation (M))|F}KV{I|L}{I|L} 6.7026;6.2337;6.192;6.1129;6.0712;5.8992;5.8576;5.7784;5.7368;5.589 +;-;-;-;-;-;-;-;-;- + 1291 + 1 2.252 68881.5 1.0 15306 6161 21468 HBL1_DMSO_200M_050219_1,21469 HBL1_DMSO_200M_050219_1,21469,IPVEFKLVI True True IPVEFKLVI 106.48393 529.336596667767 7657025.5 21468.0 nc|ENSG00000105726|Q9HD20-2|ATP13A1;;ENST00000469641.5_1_19:19756233-19756668:-|nuORF;;ENSG00000105726|ENST00000357324|ATP13A1;;nc|ENSG00000105726|Q9HD20-3|ATP13A1 3.886528412501017 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21470 106.49 334.0 237350.0 25 0 17461.0 + 7383 EGGDALLVSLV 11 70 1072.5873257527423 1071.5800492861424 1 1072.588305652142 MULTI CID FTMS 0 0 0 21468 177546.453125 1.0 0 0.0 2 Unmodified _EGGDALLVSLV_ ENSG00000241945|ENST00000291576|PWP2 45.69961567697781 0.1414455360291008 3 E{I|L}VS{I|L}V 6 5 61.024 0.0 0.0 5.6947 0.0 0.0 413.1918507306656 0.0 413.1918507306656 0.0 28.02046884880937 0.0 0.0 0 0.7742275032520141 0.0 2.2302046884880937 0.0 E{I|L}VS{I|L}V 5.6947 - 588 1 2.252 58868.2 1.0 15307 6161 21468 HBL1_DMSO_200M_050219_1,21470 HBL1_DMSO_200M_050219_1,21470,EGGDALLVSLV False False EGGDALLVSLV 106.49003 1072.58830565214 1216668.875 21468.0 ENSG00000241945|ENST00000291576|PWP2 4.995816071828206 1.0 True 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21471 106.5 800.0 86491.0 25 0 15147.0 + 11748 GLIGVGLINV 10 90 477.8028869320839 953.5912209309678 2 477.8026000857353 MULTI CID FTMS 0 0 0 21468 116330.3828125 0.6045871152115226 -9 0.1431732177734375 3 Unmodified _GLIGVGLINV_ ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-3|SBNO1 63.562846038646086 0.0272401946707695 3 {[VA]|[{I|L}G]}GV{I|L}G{I|L} 7 5 48.064 0.0 0.0 5.0404 0.0 0.0 0.0 341.1819551441116 341.1819551441116 20.70780077589532 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[VA]|[{I|L}G]}GV{I|L}G{I|L} 5.0404 - 508 1 2.252 59579.0 0.4000000059604645 15308 6161 21468 HBL1_DMSO_200M_050219_1,21471 HBL1_DMSO_200M_050219_1,21471,GLIGVGLINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21472 106.52 800.0 124450.0 25 0 3617.3 -1 VSALLLML 8 125 875.5282939562233 874.5210174896232 1 875.5295287966728 MULTI CID FTMS 0 0 0 21468 90553.9140625 0.8334331122330705 -4 0.0716400146484375 4 Oxidation (M) _VSALLLM(Oxidation (M))L_ ENSG00000237330|ENST00000453464|RNF223 78.44472497914707 0.0986812004920242 3 [{I|L}T]VG{I|L}{I|L}{M(Oxidation (M))|F}{I|L} 8 -1 + 68.234 0.0 0.0 7.8024 7.8024 84.529 0.0 0.0 0.0 15.228787452803374 16.409780573583312 15.228787452803374 2.2442373877630786 0 1.0356668758921828 1.2218487496163564 1.7856668758921828 0.0 [{I|L}T]VG{I|L}{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}T]VG{I|L}{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}T]{I|L}R{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}T]{I|L}R{M(Oxidation (M))|F}{I|L}{I|L};{I|L}{I|L}SG{I|L}{I|L}{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}T]{I|L}[VG]{I|L}{M(Oxidation (M))|F}{I|L};{I|L}{I|L}SG{I|L}{M(Oxidation (M))|F}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{M(Oxidation (M))|F}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}G{I|L}{I|L}{M(Oxidation (M))|F}{I|L} 7.8024;7.5458;6.8852;6.6286;6.061;5.9808;5.8182;5.8044;5.7242;5.606 -;-;-;-;-;-;-;-;-;- 947 1 2.252 69100.2 0.3799999952316284 15309 6161 21468 HBL1_DMSO_200M_050219_1,21472 HBL1_DMSO_200M_050219_1,21472,VSALLLML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21473 106.53 800.0 21590.0 25 0 887.48 -1 0 45 1150.216113269329 0 1150.216113269329 PEAK CID FTMS 0 0 0 -1 0 5 3 N 1 -1 0.9691 0.0 0.0 0.042164 0.0 0.0 1541.0597156970582 640.2860201471311 2181.345735844189 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.042164 - 1 + 1 2.252 20707.8 0.9900000095367432 15310 6161 21468 HBL1_DMSO_200M_050219_1,21473 HBL1_DMSO_200M_050219_1,21473, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21476 106.55 419.0 154540.0 25 0 19118.0 + -1 GQLPEELFL 9 54 1045.5558299062095 0 1045.554736316204 PEAK CID FTMS 0 0 0 21475 124774.5078125 0.9152231868152144 8 -0.1111984252929687 1 ENSG00000277150|ENST00000622749|F8A3 3 {I|L}{M(Oxidation (M))|F}{I|L}{[QG]|[NA]}{I|L}E 7 -1 36.445 0.0 0.0 1.7445 0.0 0.0 1062.545179244257 223.07341943912343 1285.6185986833805 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0356668758921828 0.6747425010840047 {I|L}{M(Oxidation (M))|F}{I|L}{[QG]|[NA]}{I|L}E 1.7445 - 388 + 1 2.252 48696.2 1.0 15311 6163 21475 HBL1_DMSO_200M_050219_1,21476 HBL1_DMSO_200M_050219_1,21476, False False GQLPEELFL 106.54568 1045.5547363162 3657288.75 21475.0 ENSG00000277150|ENST00000622749|F8A3 5.37772289911906 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21477 106.56 663.0 36824.0 25 0 1102.8 -1 0 63 871.1004516482353 0 871.1004516482353 PEAK CID FTMS 0 0 0 -1 0 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.252 26669.0 1.0 15312 6163 21475 HBL1_DMSO_200M_050219_1,21477 HBL1_DMSO_200M_050219_1,21477, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21480 106.57 510.0 244400.0 25 0 15387.0 + -1 GLIGVGLINV 10 96 954.5987187118676 0 954.5983154177666 PEAK CID FTMS 0 0 0 21479 215209.546875 0.8372107399511268 4 -0.0439529418945312 1 nc|ENSG00000139697|A3KN83-3|SBNO1;ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1 3 VN{I|L}{I|L}G{I|L}VG 8 -1 44.277 0.0 0.0 2.3216 0.0 0.0 971.6069034714184 167.0833681695922 1138.690271641011 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 VN{I|L}{I|L}G{I|L}VG 2.3216 - 9374 + 1 2.252 84297.4 1.0 15313 6165 21479 HBL1_DMSO_200M_050219_1,21480 HBL1_DMSO_200M_050219_1,21480, False False GLIGVGLINV 106.57285 954.598315417767 2733230.8125 21479.0 nc|ENSG00000139697|A3KN83-3|SBNO1;;ENSG00000139697|ENST00000602398|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1 7.101645151774089 1.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21481 106.59 800.0 42301.0 25 0 1856.6 + -1 FSSGLLVF 8 82 869.4115254928514 0 869.4024536013603 PEAK CID FTMS 0 0 0 -1 0 2 Acetyl (Protein N-term),2 Carbamidomethyl (C) _(Acetyl (Protein N-term))RRRTC(Carbamidomethyl (C))C(Carbamidomethyl (C))WRCWR_ ENST00000392001.6_1_2:238499543-238499681:-|nuORF 0.0 0.4761840153648598 3 V{I|L}{I|L}G 4 -1 17.423 0.0 0.0 1.0031 0.0 0.0 1033.4184966870714 318.1103914850219 1351.5288881720933 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}{I|L}G 1.0031 - 90 + 1 2.252 34931.6 0.3499999940395355 15314 6165 21479 HBL1_DMSO_200M_050219_1,21481 HBL1_DMSO_200M_050219_1,21481,RRRTCCWRCWR False False FSSGLLVF 106.5867 869.40245360136 368299.1875 21479.0 ENST00000392001.6_1_2:238499543-238499681:-|nuORF 0.5247302452723185 1.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21484 106.6 200.0 75655.0 25 0 16770.0 -1 0 31 894.5363036990166 0 894.5363036990166 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.252 14968.5 1.0 15315 6167 21483 HBL1_DMSO_200M_050219_1,21484 HBL1_DMSO_200M_050219_1,21484, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21485 106.6 178.0 16209.0 25 0 1921.7 -1 0 11 1125.041674792767 0 1125.041674792767 PEAK CID FTMS 0 0 0 -1 0 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.252 13642.5 1.0 15316 6167 21483 HBL1_DMSO_200M_050219_1,21485 HBL1_DMSO_200M_050219_1,21485, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21489 106.62 245.0 91559.0 25 0 3907.6 -1 0 62 1112.446093738079 0 1112.446093738079 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.252 21530.0 1.0 15317 6170 21488 HBL1_DMSO_200M_050219_1,21489 HBL1_DMSO_200M_050219_1,21489, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21490 106.62 274.0 70101.0 25 0 6597.6 -1 0 54 899.5496007657933 0 899.6044189333916 PEAK CID FTMS 0 0 0 21488 17312.349609375 0.9510934772919096 -1 0.0036163330078125 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.252 19494.5 1.0 15318 6170 21488 HBL1_DMSO_200M_050219_1,21490 HBL1_DMSO_200M_050219_1,21490, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21491 106.63 685.0 23819.0 25 0 2500.9 -1 0 47 891.1852905154228 0 891.1852905154228 PEAK CID FTMS 0 0 0 -1 0 3 3 P 1 -1 3.9794 0.0 0.0 0.22352 0.0 0.0 1075.0016712634642 605.2795504205686 1680.281221684033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.22352 - 7 + 1 2.252 19729.7 1.0 15319 6170 21488 HBL1_DMSO_200M_050219_1,21491 HBL1_DMSO_200M_050219_1,21491, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21492 106.65 800.0 60843.0 25 0 5784.5 + + -1 DAVSGMGVIVHII 13 77 655.8604365130964 0 655.8594848513603 PEAK CID FTMS 0 0 0 21488 86193.8203125 1.0 0 0.0 4 Oxidation (M) _EGVLM(Oxidation (M))IILYLM_ ENSG00000277791|ENST00000619426|PSMB3 13.90604991867851 0.4141907700618076 3 S{[MG]|[TS]}GV{I|L}VH 8 -1 23.687 0.0 0.0 1.8086 0.0 0.0 285.1312699662536 241.1560152643188 526.2872852305724 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 S{[MG]|[TS]}GV{I|L}VH 1.8086 - 320 + 1 2.252 40956.2 0.3499999940395355 15320 6170 21488 HBL1_DMSO_200M_050219_1,21492 HBL1_DMSO_200M_050219_1,21492,EGVLMIILYLM False False DAVSGMGVIVHII 106.64689 655.85948485136 587441.0625 21488.0 ENSG00000277791|ENST00000619426|PSMB3 5.492969830830892 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21494 106.65 25.0 1332600.0 25 0 313560.0 34429 SLVVRVLDV 9 42 500.3136029783879 998.6126530235758 2 500.3135558962822 MULTI CID FTMS 0 0 0 21493 1175619.0 0.152314245796575 22 -0.2918624877929687 1 Unmodified _SLVVRVLDV_ ENSG00000113211|ENST00000231136|PCDHB6 26.88365393820708 0.1891292719743517 3 {[TV]|[{I|L}S]}{I|L} 3 6 34.705 0.0 0.0 3.4753 0.0 0.0 0.0 682.3890496476829 682.3890496476829 19.22044985140652 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L} 3.4753 - 18 + 1 2.252 34037.2 1.0 15321 6171 21493 HBL1_DMSO_200M_050219_1,21494 HBL1_DMSO_200M_050219_1,21494,SLVVRVLDV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21495 106.66 228.0 202470.0 25 0 19098.0 + 12666 GVLKVFLENV 10 77 559.3345547256041 1116.654556518008 2 559.3345214724541 MULTI CID FTMS 0 0 0 21493 161079.90625 0.2122286749493057 22 -0.2918624877929687 2 Unmodified _GVLKVFLENV_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 43.85829265575387 0.1168243637355526 3 DE{I|L}K{I|L}ERV 8 5 39.161 0.0 0.0 3.507 0.0 0.0 116.09487741820188 0.0 116.09487741820188 0.0 14.960762528683702 0.0 0.0 0 0.7742275032520141 0.0 0.3494850021680094 0.0 DE{I|L}K{I|L}ERV 3.507 - 691 + 1 2.252 42034.9 1.0 15322 6171 21493 HBL1_DMSO_200M_050219_1,21495 HBL1_DMSO_200M_050219_1,21495,GVLKVFLENV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21496 106.66 278.0 32196.0 25 0 1983.9 -1 0 26 1041.9977588676836 0 1041.997363269329 PEAK CID FTMS 0 0 0 21493 118366.265625 1.0 0 0.0 3 3 {I|L} 1 -1 1.5938 0.0 0.0 0.076552 0.0 0.0 1171.472066952361 794.4148653619749 1965.886932314336 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.076552 - 2 + 1 2.252 16314.5 1.0 15323 6171 21493 HBL1_DMSO_200M_050219_1,21496 HBL1_DMSO_200M_050219_1,21496, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21500 106.69 800.0 163750.0 25 0 10123.0 + 2795 ATVAAAWLL 9 124 915.5295204772488 914.5222440106488 1 915.5331909060478 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _ATVAAAWLL_ ENSG00000116157|ENST00000361314|GPX7;ENST00000459779.1_1_1:53068081-53072661:+|nuORF 74.42276476219924 0.019389277360085 3 [PS]KTAW{I|L}{I|L} 8 5 + 53.735 0.0 0.0 5.8757 5.8757 76.91 0.0 0.0 0.0 0.9280969002266914 12.315534464597704 0.9280969002266914 0.9280969002266914 0 0.6549471895720985 0.0 2.20597718523608 0.0 [PS]KTAW{I|L}{I|L};[TA]VAAAW{I|L}{I|L};{[VA]|[{I|L}G]}TAAAW{I|L}{I|L};{[NV]|[RG]}VTAW{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L}ASA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AA{I|L}SA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RA{I|L}DA{I|L};[PS]KTWA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RA{[DA]|[EG]}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L}GTA{I|L}{I|L} 5.8757;5.7743;5.7242;5.6505;5.3197;5.3197;5.191;5.1408;5.1288;5.0772 -;+;-;-;-;-;-;-;-;- + 3461 1 2.252 86061.3 0.3899999856948852 15324 6174 21499 HBL1_DMSO_200M_050219_1,21500 HBL1_DMSO_200M_050219_1,21500,ATVAAAWLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21503 106.71 800.0 95275.0 25 0 14681.0 -1 0 81 1058.819750964642 0 1058.819750964642 PEAK CID FTMS 0 0 0 -1 0 1 3 {I|L}V{I|L} 3 -1 13.188 0.0 0.0 0.62334 0.0 0.0 1075.9839100329966 711.3919161432249 1787.3758261762214 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V{I|L} 0.62334 - 21 + 1 2.252 51544.3 0.3400000035762787 15325 6176 21502 HBL1_DMSO_200M_050219_1,21503 HBL1_DMSO_200M_050219_1,21503, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21504 106.72 800.0 71552.0 25 0 4575.7 -1 0 86 749.877722078676 2995.481782448304 4 750.1291992068291 MULTI CID FTMS 0 0 0 21502 106356.5625 0.7706123014576471 6 -0.1091690063476562 2 3 A[C(Carbamidomethyl (C))D]SA{I|L}SD{I|L}HA[HK] 13 -1 45.693 0.0 0.0 1.5254 0.0 0.0 1571.8447265759798 0.0 1571.8447265759798 0.0 31.22936648326597 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 A[C(Carbamidomethyl (C))D]SA{I|L}SD{I|L}HA[HK] 1.5254 - 1174 + 1 2.252 50875.6 0.3700000047683716 15326 6176 21502 HBL1_DMSO_200M_050219_1,21504 HBL1_DMSO_200M_050219_1,21504, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21506 106.72 52.0 1024700.0 25 0 110570.0 + 14656 IIMLEALERV 10 48 593.8467770912213 1185.6790012492424 2 593.8470947146416 MULTI CID FTMS 0 0 0 21505 343789.71875 0.3668906931451993 5 -0.078948974609375 1 Unmodified _IIMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 35.61225514009592 0.2039006631696762 3 {I|L}{I|L}M{I|L}EA{I|L}E[RV] 10 0 + 89.43 0.0 0.0 7.5425 7.5425 96.901 0.0 0.0 0.0 66.75373472475883 8.691577868965155 8.691577868965155 89.42979712652914 0 0.9247425010840048 2.0 0.0 0.3807196863200844 + + {I|L}{I|L}M{I|L}EA{I|L}E[RV] 7.5425 + + 113 + 1 2.252 47858.1 1.0 15327 6177 21505 HBL1_DMSO_200M_050219_1,21506 HBL1_DMSO_200M_050219_1,21506,IIMLEALERV False True IIMLEALERV 106.72446 593.847094714642 16952862.0 21505.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 6.416659673055013 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21509 106.74 221.0 276000.0 25 0 30980.0 + 42903 VVPQLFITV 9 45 1015.618829697236 1014.611553230636 1 1015.618823230267 MULTI CID FTMS 0 0 0 21508 443943.40625 1.0 0 0.0 1 Unmodified _VVPQLFITV_ ENSG00000142583|ENST00000377424|SLC2A5;nc|ENSG00000142583|P22732-2|SLC2A5 34.40172386719151 0.1061884637610825 3 [QP]{I|L}{M(Oxidation (M))|F}{I|L}TVVV 9 4 + 60.353 0.0 0.0 5.9484 5.9484 77.666 0.0 0.0 0.0 10.400217704352457 41.196662315049934 10.400217704352457 1.249387366082999 0 0.0 0.0 1.1237125054200234 0.3252574989159953 [QP]{I|L}{M(Oxidation (M))|F}{I|L}TVVV;[QP]{I|L}{M(Oxidation (M))|F}{I|L}VVTV;[QP]{I|L}{M(Oxidation (M))|F}{I|L}VTVV;[QP]{I|L}VV{M(Oxidation (M))|F}{I|L}TV;[QP]{I|L}{M(Oxidation (M))|F}VV{I|L}TV;[QP]VV{I|L}{M(Oxidation (M))|F}{I|L}TV;[QP]{I|L}{M(Oxidation (M))|F}V{I|L}VTV;[QP]{I|L}{M(Oxidation (M))|F}V{I|L}TVV;[QP]V{I|L}V{M(Oxidation (M))|F}{I|L}TV;[QP]{I|L}V{M(Oxidation (M))|F}V{I|L}TV 5.9484;5.8253;5.7775;5.3312;5.208;5.1815;4.9113;4.8636;4.8609;4.7378 -;-;-;-;-;-;-;-;-;- 626 1 2.252 46998.4 1.0 15328 6179 21508 HBL1_DMSO_200M_050219_1,21509 HBL1_DMSO_200M_050219_1,21509,VVPQLFITV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21510 106.75 800.0 173580.0 25 0 10807.0 6640 EAVIMAVGI 9 106 902.5016922597584 901.4944157931584 1 902.5022460818292 MULTI CID FTMS 0 0 0 21508 70375.2734375 0.4656437603358246 10 -0.1352920532226562 2 Unmodified _EAVIMAVGI_ ENSG00000178719|ENST00000395068|GRINA;ENST00000533377.1_1_8:145066406-145067006:+|nuORF 48.345845343767074 0.0439967357579942 3 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{I|L}AVG{I|L} 9 4 + 65.046 0.0 0.0 7.2153 7.2153 84.328 0.0 0.0 0.0 4.771212547196626 16.478174818886373 4.771212547196626 3.0102999566398125 0 0.3807196863200844 0.0 0.9634679910804403 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{I|L}AVG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GA{I|L}VG{I|L};{[DA]|[EG]}{I|L}M{I|L}AVG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{I|L}AR{I|L};{[DA]|[EG]}{I|L}{I|L}MAVG{I|L};{[DA]|[EG]}{I|L}MA{I|L}VG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AVAVG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}Q{I|L}VG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{I|L}G{I|L}G{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GA{I|L}R{I|L} 7.2153;6.8814;6.6861;6.4699;6.3571;6.3522;6.2779;6.1628;6.1388;6.1359 -;-;-;-;-;-;-;-;-;- 1996 1 2.252 92733.8 0.8100000023841858 15329 6179 21508 HBL1_DMSO_200M_050219_1,21510 HBL1_DMSO_200M_050219_1,21510,EAVIMAVGI True True GIMELAVGL 106.74914 902.502246081829 1250106.0 21508.0 ENSG00000176340|ENST00000314133|COX8A 0.7086186707019806 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21511 106.76 763.0 56965.0 25 0 931.93 -1 0 77 948.6612281539308 0 948.2059814333916 PEAK CID FTMS 0 0 0 -1 0 3 3 T 1 -1 2.2185 0.0 0.0 0.11705 0.0 0.0 1175.960138337355 615.2848604791624 1791.2449988165172 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.11705 - 5 + 1 2.252 33328.7 1.0 15330 6179 21508 HBL1_DMSO_200M_050219_1,21511 HBL1_DMSO_200M_050219_1,21511, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21513 106.77 389.0 147730.0 25 0 12709.0 + 15507 IPVEFKLVI 9 78 529.3365639048626 1056.658574876525 2 529.3367797732353 MULTI CID FTMS 0 0 0 21512 93229.171875 0.2080521694388861 17 -0.192718505859375 1 Unmodified _IPVEFKLVI_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19756233-19756668:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1;nc|ENSG00000105726|Q9HD20-3|ATP13A1 45.69961567697781 0.0497987121815769 3 {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L} 9 0 + 46.646 0.0 0.0 4.4145 4.4145 86.56 0.0 0.0 0.0 20.487541091411856 0.1435869402363465 0.1435869402363465 46.646191202979495 0 1.1677353201839438 1.5228787452803376 0.0 0.0 + + {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L} 4.4145 + + 393 + 1 2.252 52649.8 1.0 15331 6180 21512 HBL1_DMSO_200M_050219_1,21513 HBL1_DMSO_200M_050219_1,21513,IPVEFKLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21514 106.79 800.0 30890.0 25 0 1066.2 -1 0 66 1161.080493152142 0 1161.080493152142 PEAK CID FTMS 0 0 0 -1 0 2 3 H 1 -1 3.9794 0.0 0.0 0.17152 0.0 0.0 994.1101307361216 1185.9613741510375 2180.07150488716 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.17152 - 3 + 1 2.252 21993.5 0.6000000238418579 15332 6180 21512 HBL1_DMSO_200M_050219_1,21514 HBL1_DMSO_200M_050219_1,21514, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21515 106.79 147.0 1034100.0 25 0 586420.0 + 39494 VARSLVLEL 9 85 999.61954071181 998.61226424521 1 999.6234008669852 MULTI CID FTMS 0 0 0 21512 103449.8046875 0.0683977521510703 19 -0.2131576538085937 3 Unmodified _VARSLVLEL_ REV__ENSG00000197272|ENST00000356897|IL27 6.723162845929126 0.6799819581413107 3 N 1 -1 10.797 0.0 0.0 1.0812 0.0 0.0 529.3574252332943 352.1862887018188 881.5437139351131 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 N 1.0812 - 90 + 1 2.252 108563.6 1.0 15333 6180 21512 HBL1_DMSO_200M_050219_1,21515 HBL1_DMSO_200M_050219_1,21515,VARSLVLEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21516 106.79 266.0 26054.0 25 0 2030.9 -1 0 22 1114.218676745892 0 1114.218676745892 PEAK CID FTMS 0 0 0 -1 0 4 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.252 16276.6 1.0 15334 6180 21512 HBL1_DMSO_200M_050219_1,21516 HBL1_DMSO_200M_050219_1,21516, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21519 106.8 148.0 132920.0 25 0 37400.0 -1 0 37 1188.993457019329 0 1188.993457019329 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.252 21815.8 1.0 15335 6182 21518 HBL1_DMSO_200M_050219_1,21519 HBL1_DMSO_200M_050219_1,21519, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21522 106.82 566.0 449610.0 25 0 61995.0 + 33832 SLDVLITL 8 125 873.5288407209964 872.5215642543964 1 873.5322753787041 MULTI CID FTMS 0 0 0 21521 478285.0 0.6247790532432493 15 -0.1671371459960937 1 Unmodified _SLDVLITL_ ENSG00000109618|ENST00000382103|SEPSECS;ENST00000503150.1_1_4:25127403-25156626:-|nuORF;nc|ENSG00000109618|Q9HD40-3|SEPSECS 109.62928328672726 0.0469763173861337 3 [{I|L}V]SD{I|L}{I|L}T{I|L} 8 3 + 78.687 0.0 0.0 9.0184 9.0184 82.515 0.0 0.0 0.0 0.0665049248116247 14.904630595263413 0.0665049248116247 0.0665049248116247 0 1.024227503252014 1.0457574905606752 1.8882104921644447 0.0 [{I|L}V]SD{I|L}{I|L}T{I|L};{[TV]|[{I|L}S]}DV{I|L}{I|L}T{I|L};[{I|L}V]DS{I|L}{I|L}T{I|L};[{I|L}V]SEV{I|L}T{I|L};{[TV]|[{I|L}S]}D{I|L}V{I|L}T{I|L};{[TV]|[{I|L}S]}VD{I|L}{I|L}T{I|L};[{I|L}V]SD{I|L}T{I|L}{I|L};{[TV]|[{I|L}S]}DV{I|L}T{I|L}{I|L};{[DS]|[MA]|[CV]|TT}{I|L}V{I|L}{I|L}T{I|L};[{I|L}V]S{I|L}D{I|L}T{I|L} 9.0184;9.0107;8.3424;8.3006;8.2929;8.1648;7.9847;7.9771;7.8646;7.7128 -;+;-;-;-;-;-;-;-;- + 2784 1 2.252 166645.1 1.0 15336 6184 21521 HBL1_DMSO_200M_050219_1,21522 HBL1_DMSO_200M_050219_1,21522,SLDVLITL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21523 106.83 800.0 93890.0 25 0 9100.2 + 16224 IVLTGILEQV 10 95 542.8344978616486 1083.6544427900972 2 542.8342773318291 MULTI CID FTMS 0 0 0 21521 102307.3671875 0.8407600991294075 -5 0.0795211791992187 2 Unmodified _IVLTGILEQV_ ENSG00000069329|ENST00000299138|VPS35;ENST00000568642.5_1_16:46706372-46712929:-|nuORF;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENST00000569950.1_1_16:46710493-46715410:-|nuORF 64.23631603340823 0.0254735623525308 3 [{I|L}V]ATV{I|L}{I|L} 7 5 56.859 0.0 0.0 5.247 0.0 0.0 0.0 371.1600329602722 371.1600329602722 37.66334779402399 0.0 0.0 0.0 0 0.0 2.0 1.416386562212267 0.0 [{I|L}V]ATV{I|L}{I|L} 5.247 - 795 1 2.252 63696.6 0.3600000143051147 15337 6184 21521 HBL1_DMSO_200M_050219_1,21523 HBL1_DMSO_200M_050219_1,21523,IVLTGILEQV True True IVLTGILEQV 106.83438 542.834277331829 692347.8125 21521.0 ENST00000568642.5_1_16:46706372-46712929:-|nuORF;;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENST00000569950.1_1_16:46710493-46715410:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 4.801952044169108 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21526 106.86 771.0 71702.0 25 0 5867.9 -1 0 95 1037.5713915633723 0 1037.588671863079 PEAK CID FTMS 0 0 0 21525 31460.48828125 0.5311608714961447 -3 0.0342864990234375 1 3 {I|L}QS{I|L}{M(Oxidation (M))|F} 5 -1 19.558 0.0 0.0 0.94339 0.0 0.0 1302.6927576367073 179.11898218326408 1481.8117398199713 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 {I|L}QS{I|L}{M(Oxidation (M))|F} 0.94339 - 507 + 1 2.252 44774.4 1.0 15338 6186 21525 HBL1_DMSO_200M_050219_1,21526 HBL1_DMSO_200M_050219_1,21526, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21530 106.88 800.0 146370.0 25 0 21541.0 + 24014 LVYEAIIMV 9 83 1050.59010315948 1049.58282669288 1 1050.589526355267 MULTI CID FTMS 0 0 0 21529 102603.203125 0.1449103505536407 39 -0.2655487060546875 1 Unmodified _LVYEAIIMV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 70.71552829651908 0.0208223590022201 3 [{I|L}V]YEA{I|L}{I|L}MV 9 0 + 74.024 0.0 0.0 7.0527 7.0527 86.883 0.0 0.0 0.0 5.228787452803374 16.478174818886373 5.228787452803374 5.228787452803374 0 0.6307196863200843 1.3010299956639813 0.9634679910804403 0.0 + + [{I|L}V]YEA{I|L}{I|L}MV;[YE]A{I|L}V{I|L}{I|L}MV;[{I|L}V]YEA{I|L}M{I|L}V;[{M(Oxidation (M))|F}T]D{I|L}V{I|L}M{I|L}V;[{I|L}A]EYV{I|L}{I|L}MV;[{I|L}V]YE{I|L}A{I|L}MV;[{M(Oxidation (M))|F}T]D{I|L}V{I|L}{I|L}MV;[{I|L}A]{I|L}DY{I|L}{I|L}MV;[YE]AV{I|L}{I|L}{I|L}MV;[YE]A{I|L}{I|L}V{I|L}MV 7.0527;6.5545;6.4032;6.3814;6.2677;6.2396;6.1918;6.1365;6.0999;5.9578 +;-;-;-;-;-;-;-;-;- + 4003 1 2.252 80490.7 0.4900000095367431 15339 6189 21529 HBL1_DMSO_200M_050219_1,21530 HBL1_DMSO_200M_050219_1,21530,LVYEAIIMV True True LVYEAIIMV 106.88023 1050.58952635527 17545928.0 21529.0 nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 2.214611848195394 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21531 106.89 800.0 174010.0 25 0 20228.0 + 15338 IPLSEILTV 9 105 984.598811015414 983.591534548814 1 984.5975829958916 MULTI CID FTMS 0 0 0 21529 128477.7734375 1.0 0 0.0 2 Unmodified _IPLSEILTV_ ENSG00000105287|ENST00000291281|PRKD2;ENST00000597589.5_1_19:47177782-47200527:-|nuORF;ENST00000599019.5_1_19:47177782-47200527:-|nuORF;nc|ENSG00000105287|Q9BZL6-2|PRKD2;nc|ENSG00000105287|Q9BZL6-3|PRKD2 85.35673624503755 0.0162188719545379 3 [{I|L}P]SE{I|L}{I|L}{I|L}TV 9 2 + 92.432 0.0 0.0 9.3974 9.3974 88.439 0.0 0.0 0.0 3.433881838816802 7.028937514676485 3.433881838816802 3.433881838816802 0 0.1989700043360188 1.5228787452803376 2.360924374808178 0.0 [{I|L}P]SE{I|L}{I|L}{I|L}TV;[{I|L}T]DP{I|L}{I|L}{I|L}TV;{[QN]|[E{I|L}]|[KN]}SP{I|L}{I|L}{I|L}TV;[{I|L}T]D{I|L}P{I|L}{I|L}TV;[{I|L}P]SE{I|L}{I|L}T{I|L}V;[{I|L}P]SE{I|L}{I|L}{I|L}S{I|L};[{I|L}P]S{I|L}E{I|L}{I|L}TV;{[QN]|[E{I|L}]|[KN]}S{I|L}P{I|L}{I|L}TV;{[QN]|[E{I|L}]|[KN]}SP{I|L}{I|L}{I|L}S{I|L};[{I|L}T]DP{I|L}{I|L}T{I|L}V 9.3974;9.0482;8.7824;8.6858;8.6841;8.6827;8.6524;8.42;8.3985;8.335 -;-;-;-;-;-;-;-;-;- 3358 1 2.252 95315.8 0.8500000238418579 15340 6189 21529 HBL1_DMSO_200M_050219_1,21531 HBL1_DMSO_200M_050219_1,21531,IPLSEILTV True True IPLSEILTV 106.8941 984.597582995892 1408599.5 21529.0 ENST00000597589.5_1_19:47177782-47200527:-|nuORF;;ENST00000599019.5_1_19:47177782-47200527:-|nuORF;;nc|ENSG00000105287|Q9BZL6-3|PRKD2;;nc|ENSG00000105287|Q9BZL6-2|PRKD2;;ENSG00000105287|ENST00000291281|PRKD2 5.614561875661214 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21532 106.91 800.0 95367.0 25 0 9990.9 + 35404 STIDILYQL 9 89 533.2948406671017 1064.5751284010032 2 533.2945434451103 MULTI CID FTMS 0 0 0 21529 88737.171875 0.7090162450614499 -18 0.217010498046875 3 Unmodified _STIDILYQL_ ENSG00000115760|ENST00000421745|BIRC6 67.34385681178166 0.0221257235307089 3 {NN|[MP]|[D{I|L}]|[EV]}TS{I|L}{I|L} 6 6 35.881 0.0 0.0 3.3704 0.0 0.0 0.0 419.1901546063345 419.1901546063345 11.126342309407548 0.0 0.0 0.0 0 0.2887254899964357 1.0 1.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}TS{I|L}{I|L} 3.3704 - 384 1 2.252 62403.0 0.3300000131130218 15341 6189 21529 HBL1_DMSO_200M_050219_1,21532 HBL1_DMSO_200M_050219_1,21532,STIDILYQL True True STIDILYQL 106.90794 533.29454344511 806820.875 21529.0 ENSG00000115760|ENST00000421745|BIRC6 3.725696404774984 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21534 106.91 111.0 430080.0 25 0 93567.0 + 33491 SIIGRLLEV 9 70 500.3136029783879 998.6126530235758 2 500.3136169314384 MULTI CID FTMS 0 0 0 21533 446836.0625 0.0578924786469075 41 -0.2945480346679687 1 Unmodified _SIIGRLLEV_ ENSG00000172531|ENST00000376745|PPP1CA 31.26834338654808 0.1333407332142048 3 E{I|L}VTV 5 7 33.175 0.0 0.0 3.3221 0.0 0.0 439.29185683418126 0.0 439.29185683418126 0.0 19.636153375280188 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 E{I|L}VTV 3.3221 - 26 1 2.252 42331.2 1.0 15342 6190 21533 HBL1_DMSO_200M_050219_1,21534 HBL1_DMSO_200M_050219_1,21534,SIIGRLLEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21535 106.92 609.0 98967.0 25 0 16985.0 + 21376 LPFRVLLV 8 68 478.818484996075 955.62241705895 2 478.8187133669853 MULTI CID FTMS 0 0 0 21533 110979.15625 0.6742331530610657 -26 0.3507156372070312 2 Unmodified _LPFRVLLV_ ENSG00000005448|ENST00000348227|WDR54;ENST00000461531.5_1_2:74648856-74650350:+|nuORF;ENST00000469932.5_1_2:74649280-74650140:+|nuORF;nc|ENSG00000005448|Q9H977-3|WDR54;nc|ENSG00000005448|Q9H977-4|WDR54 50.855029805455786 0.1352255786796883 3 {I|L}P{M(Oxidation (M))|F} 3 5 39.838 0.0 0.0 4.1688 0.0 0.0 0.0 595.3947847955686 595.3947847955686 4.136890462689138 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}P{M(Oxidation (M))|F} 4.1688 + + 105 + 1 2.252 51728.8 1.0 15343 6190 21533 HBL1_DMSO_200M_050219_1,21535 HBL1_DMSO_200M_050219_1,21535,LPFRVLLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21537 106.93 395.0 103470.0 25 0 10015.0 + 12667 GVLKVFLENV 10 81 559.3345547256041 1116.654556518008 2 559.3347656130791 MULTI CID FTMS 0 0 0 21536 181404.40625 0.2390069479470103 42 -0.2975692749023437 1 Unmodified _GVLKVFLENV_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 49.93300154707207 0.0805441195901191 3 [VG]{I|L}KV{M(Oxidation (M))|F}{I|L}ENV 10 0 + 62.88 0.0 0.0 5.6311 5.6311 90.048 0.0 0.0 0.0 21.500065532235126 40.94212497064703 21.500065532235126 29.719712763997563 0 0.6677353201839438 2.0 0.3807196863200844 0.0 + + [VG]{I|L}KV{M(Oxidation (M))|F}{I|L}ENV;[KG][{I|L}V]V{M(Oxidation (M))|F}{I|L}ENV;[K{I|L}][VG]V{M(Oxidation (M))|F}{I|L}ENV;[{M(Oxidation (M))|F}V][K{I|L}][VG]{I|L}ENV;[{M(Oxidation (M))|F}V][K{I|L}]{I|L}[VG]ENV;[{M(Oxidation (M))|F}V][K{I|L}]{I|L}E[VG]NV 5.6311;2.9696;2.8388;1.2534;0.98381;0.71423 +;-;-;-;-;- + 294 1 2.252 42490.9 1.0 15344 6191 21536 HBL1_DMSO_200M_050219_1,21537 HBL1_DMSO_200M_050219_1,21537,GVLKVFLENV True True GVLKVFLENV 106.93462 559.334765613079 18288390.0 21536.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 7.666673024495442 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21544 106.97 800.0 106410.0 25 0 7318.1 + 21372 LPFRVIPLV 9 89 527.3448788574178 1052.6752047816356 2 527.3447753787041 MULTI CID FTMS 0 0 0 21543 60410.4609375 0.2783228266471283 -19 0.23028564453125 1 Unmodified _LPFRVIPLV_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000461733.5_1_3:183898306-183901401:+|nuORF;ENST00000480260.1_1_3:183899436-183900037:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 49.55428908609986 0.0413471690215031 3 {I|L}V{I|L}P{I|L}V 6 3 48.136 0.0 0.0 4.5727 0.0 0.0 400.22200209785314 0.0 400.22200209785314 0.0 9.69273760456403 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L}V{I|L}P{I|L}V 4.5727 - 238 1 2.252 75003.4 0.3600000143051147 15345 6197 21543 HBL1_DMSO_200M_050219_1,21544 HBL1_DMSO_200M_050219_1,21544,LPFRVIPLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21548 107.0 800.0 89454.0 25 0 12206.0 + 24638 MLPSILNQL 9 87 514.794053812224 1027.573554691248 2 514.7942382693291 MULTI CID FTMS 0 0 0 21547 86818.421875 0.6366792042052796 -9 0.0555877685546875 1 Unmodified _MLPSILNQL_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 36.04419817259434 0.0971720506436186 3 [PS]{I|L}{I|L}NQ 6 3 47.682 0.0 0.0 4.6403 0.0 0.0 0.0 372.1980413457979 372.1980413457979 25.490859778959063 0.0 0.0 0.0 0 0.0 0.6989700043360187 1.055462187404089 0.9247425010840048 + [PS]{I|L}{I|L}NQ 4.6403 + + 193 1 2.252 59193.8 0.7099999785423279 15346 6200 21547 HBL1_DMSO_200M_050219_1,21548 HBL1_DMSO_200M_050219_1,21548,MLPSILNQL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21567 107.08 800.0 68916.0 25 0 14250.0 4705 DDSGNDIIVL 10 78 530.7620373632471 1059.5095217932942 2 530.7625610232353 MULTI CID FTMS 0 0 0 21566 80991.390625 0.8646077063517474 1 -0.0163726806640625 1 Unmodified _DDSGNDIIVL_ ENSG00000044115|ENST00000302763|CTNNA1;ENSG00000066032|ENST00000402739|CTNNA2;ENST00000467892.1_1_2:80816479-80835548:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2 15.248480904072842 0.5916873121453583 3 VEV 3 9 19.085 0.0 0.0 1.8013 0.0 0.0 343.2456237812315 386.06016226948 729.3057860507115 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 VEV 1.8013 - 82 + 1 2.252 48505.7 0.3499999940395355 15347 6218 21566 HBL1_DMSO_200M_050219_1,21567 HBL1_DMSO_200M_050219_1,21567,DDSGNDIIVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21570 107.09 468.0 23515.0 25 0 6148.6 -1 0 22 1097.681445300579 0 1097.681445300579 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.252 16398.6 1.0 15348 6220 21569 HBL1_DMSO_200M_050219_1,21570 HBL1_DMSO_200M_050219_1,21570, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21575 107.12 418.0 219350.0 25 0 24014.0 + 35686 SVEVLLTL 8 109 873.5288407209964 872.5215642543964 1 873.5295898318291 MULTI CID FTMS 0 0 0 21574 61450.97265625 0.0802728091348227 55 -0.5128860473632812 1 Unmodified _SVEVLLTL_ REV__ENSG00000160606|ENST00000292090|TLCD1;REV__nc|ENSG00000160606|Q96CP7-2|TLCD1 101.72198241140316 0.0888720693655427 3 [{I|L}T]{[CP]|[EA]}{I|L}{I|L}T{I|L} 8 -1 + 74.659 0.0 0.0 8.5566 8.5566 88.516 0.0 0.0 0.0 5.632119745481262 16.40978057358332 5.632119745481262 4.132479879980934 0 1.1549471895720984 1.5228787452803376 1.548455006504028 0.0 [{I|L}T]{[CP]|[EA]}{I|L}{I|L}T{I|L};[{I|L}T]VDV{I|L}T{I|L};[{I|L}V]SD{I|L}{I|L}T{I|L};[{I|L}T]{[CP]|[EA]}{I|L}T{I|L}{I|L};[{I|L}T]VVD{I|L}T{I|L};[{I|L}T]VDVT{I|L}{I|L};[{I|L}T]{I|L}{[CP]|[EA]}{I|L}T{I|L};[{I|L}V]SD{I|L}T{I|L}{I|L};[{I|L}V]SEV{I|L}T{I|L};[{I|L}T]VVDT{I|L}{I|L} 8.5566;8.083;7.9111;7.6744;7.668;7.2008;7.1729;7.0289;6.8271;6.7857 -;-;-;-;-;-;-;-;-;- 993 1 2.304 63735.8 1.0 15349 6224 21574 HBL1_DMSO_200M_050219_1,21575 HBL1_DMSO_200M_050219_1,21575,SVEVLLTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21580 107.15 800.0 104420.0 25 0 6930.3 -1 0 129 893.9607389326112 0 894.0038940310478 PEAK CID FTMS 0 0 0 21579 6577.587890625 0.4848075007341805 1 -0.0302505493164062 1 3 Q{I|L}{I|L}AA 5 -1 27.959 0.0 0.0 1.5655 0.0 0.0 259.11647851306185 1027.4698408280572 1286.586319341119 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L}{I|L}AA 1.5655 - 163 + 1 2.304 60911.8 0.6700000166893005 15350 6228 21579 HBL1_DMSO_200M_050219_1,21580 HBL1_DMSO_200M_050219_1,21580, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21581 107.16 800.0 191370.0 25 0 24493.0 + 24639 MLPSILNQL 9 110 1028.5812425782456 1027.5739661116456 1 1028.579028308392 MULTI CID FTMS 0 0 0 21579 122107.3828125 0.5676616512838624 -1 0.0040740966796875 2 Unmodified _MLPSILNQL_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 188.57702930522865 6.085055062304637e-12 3 [PS]{I|L}{I|L}M{I|L}NQ{I|L} 9 4 + 93.814 0.0 0.0 9.1296 9.1296 83.01 0.0 0.0 0.0 16.06512592990248 16.478174818886373 16.06512592990248 0.35642056228005 0 1.1989700043360187 0.0 2.724907363720609 0.7742275032520141 [PS]{I|L}{I|L}M{I|L}NQ{I|L};[PS]{I|L}M{I|L}{I|L}NQ{I|L};[PS]{I|L}{I|L}M{I|L}N[AG]{I|L};[PS]{I|L}M{I|L}{I|L}N[AG]{I|L};[PS]{I|L}{I|L}M{I|L}GGQ{I|L};[PS]{I|L}M{I|L}{I|L}GGQ{I|L};[PS]{I|L}{I|L}{I|L}MNQ{I|L};{[QN]|[E{I|L}]|[KN]}VS{I|L}{I|L}NQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PS{I|L}{I|L}NQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NS{I|L}{I|L}NQ{I|L} 9.1296;9.095;8.2335;8.1988;7.8934;7.8587;7.594;7.5662;7.5662;6.8431 -;-;-;-;-;-;-;-;+;- + 5282 1 2.304 103421.9 0.4399999976158142 15351 6228 21579 HBL1_DMSO_200M_050219_1,21581 HBL1_DMSO_200M_050219_1,21581,MLPSILNQL True True MLPSILNQL 107.15963 1028.57902830839 835761.3125 21579.0 nc|ENSG00000145741|P20290-2|BTF3;;ENSG00000145741|ENST00000380591|BTF3 5.248054345448812 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21584 107.17 122.0 252020.0 25 0 57474.0 + 34102 SLLLRIGEV 9 50 500.3136029783879 998.6126530235758 2 500.3134033083916 MULTI CID FTMS 0 0 0 21583 130203.1015625 0.0168692299247179 81 -0.7130508422851562 1 Unmodified _SLLLRIGEV_ ENSG00000197226|ENST00000355235|TBC1D9B;ENST00000520794.1_1_5:179290450-179293075:-|nuORF;nc|ENSG00000197226|Q66K14|TBC1D9B 29.081581746732265 0.1611639662936252 3 EV 2 7 20.049 0.0 0.0 2.0077 0.0 0.0 752.4912826395899 0.0 752.4912826395899 0.0 -14.655593552960935 -14.655593552960935 0.0 0 0.5 0.0 0.4247425010840047 0.0 + EV 2.0077 + + 13 + 1 2.304 29106.6 1.0 15352 6230 21583 HBL1_DMSO_200M_050219_1,21584 HBL1_DMSO_200M_050219_1,21584,SLLLRIGEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21585 107.18 693.0 47231.0 25 0 1263.1 -1 0 78 1042.774994233003 0 1042.657885730267 PEAK CID FTMS 0 0 0 21583 26630.01953125 0.5665125393725128 1 -0.0391311645507812 2 3 Y{I|L} 2 -1 9.464 0.0 0.0 0.45423 0.0 0.0 1260.0899532103438 544.2777193658811 1804.3676725762248 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 0.45423 - 17 + 1 2.304 27046.0 1.0 15353 6230 21583 HBL1_DMSO_200M_050219_1,21585 HBL1_DMSO_200M_050219_1,21585, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21586 107.19 800.0 147740.0 25 0 14204.0 + 42904 VVPQLFITV 9 102 1015.618829697236 1014.611553230636 1 1015.624560534954 MULTI CID FTMS 0 0 0 21583 112218.625 0.2527768707005094 51 -0.472320556640625 3 Unmodified _VVPQLFITV_ ENSG00000142583|ENST00000377424|SLC2A5;nc|ENSG00000142583|P22732-2|SLC2A5 74.92900055777586 0.0191935851694334 3 [QP]{I|L}VV{M(Oxidation (M))|F}{I|L}TV 9 4 + 67.788 0.0 0.0 6.6812 6.6812 77.878 0.0 0.0 0.0 0.0396897671798512 16.478174818886373 0.0396897671798512 0.0396897671798512 0 0.2887254899964357 0.0 0.4247425010840047 0.9049471895720984 [QP]{I|L}VV{M(Oxidation (M))|F}{I|L}TV;{[QN]|[E{I|L}]|[KN]}{I|L}TQV{I|L}TV;[QP]{I|L}{M(Oxidation (M))|F}{I|L}VVTV;[QP]{I|L}{M(Oxidation (M))|F}{I|L}TVVV;{[QN]|[E{I|L}]|[KN]}{I|L}TQ{I|L}VTV;[QP]{I|L}{M(Oxidation (M))|F}VV{I|L}TV;{[QN]|[E{I|L}]|[KN]}{I|L}TAAVVTV;[QP]{I|L}{M(Oxidation (M))|F}{I|L}VTVV;[Q{I|L}]PVV{M(Oxidation (M))|F}{I|L}TV;[QP]{I|L}V{M(Oxidation (M))|F}V{I|L}TV 6.6812;6.6773;6.3801;6.1671;6.1342;6.1324;6.0174;5.9962;5.9142;5.8357 -;-;-;-;-;-;-;-;-;- 1777 1 2.304 83517.3 0.6000000238418579 15354 6230 21583 HBL1_DMSO_200M_050219_1,21586 HBL1_DMSO_200M_050219_1,21586,VVPQLFITV True True VVPQLFITV 107.19435 1015.62456053495 8447779.0 21583.0 ENSG00000142583|ENST00000377424|SLC2A5;;nc|ENSG00000142583|P22732-2|SLC2A5 5.732344786326091 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21587 107.2 458.0 24064.0 25 0 1144.4 -1 0 37 978.3214196435606 0 978.2962524294852 PEAK CID FTMS 0 0 0 -1 0 4 3 E 1 -1 5.4846 0.0 0.0 0.28059 0.0 0.0 1368.3553504181773 454.19599329166255 1822.55134370984 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.28059 - 6 + 1 2.304 18509.6 1.0 15355 6230 21583 HBL1_DMSO_200M_050219_1,21587 HBL1_DMSO_200M_050219_1,21587, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21590 107.22 328.0 126960.0 25 0 9081.8 + 21373 LPFRVIPLV 9 53 527.3448988824101 1052.67524483162 2 527.3446533083916 MULTI CID FTMS 0 0 0 21589 156594.484375 0.682716282509425 -1 0.004058837890625 1 Unmodified _LPFRVIPLV_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000461733.5_1_3:183898306-183901401:+|nuORF;ENST00000480260.1_1_3:183899436-183900037:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 41.95555342248728 0.0647214845423414 3 WVP{I|L}{I|L}V 6 6 53.646 0.0 0.0 5.0962 0.0 0.0 327.2155018537125 0.0 327.2155018537125 0.0 12.19273760456403 0.0 0.0 0 1.25 0.0 0.0 0.0 WVP{I|L}{I|L}V 5.0962 - 100 1 2.304 42727.2 1.0 15356 6232 21589 HBL1_DMSO_200M_050219_1,21590 HBL1_DMSO_200M_050219_1,21590,LPFRVIPLV True True LPFRVIPLV 107.21507 527.344653308392 4168005.25 21589.0 ENST00000461733.5_1_3:183898306-183901401:+|nuORF;;ENST00000480260.1_1_3:183899436-183900037:+|nuORF;;nc|ENSG00000161203|Q96CW1-2|AP2M1;;ENSG00000161203|ENST00000292807|AP2M1 7.246936162312825 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21591 107.22 341.0 162520.0 25 0 15339.0 + 3354 AYPEYLITF 9 76 558.7844714892847 1115.5543900453692 2 558.7845336794853 MULTI CID FTMS 0 0 0 21589 174209.859375 0.6630156919739489 -10 0.1075210571289062 2 Unmodified _AYPEYLITF_ ENSG00000173193|ENST00000474629|PARP14;ENSG00000173200|ENST00000464300|PARP15;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;nc|ENSG00000173200|Q460N3-2|PARP15 28.486842064014134 0.1687311288560894 3 [EP]Y{I|L}AY 6 5 27.826 0.0 0.0 2.4944 0.0 0.0 0.0 376.186872305388 376.186872305388 1.1268387026911135 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 [EP]Y{I|L}AY 2.4944 - 207 1 2.304 54357.4 1.0 15357 6232 21589 HBL1_DMSO_200M_050219_1,21591 HBL1_DMSO_200M_050219_1,21591,AYPEYLITF False True AYPEYLITF 107.22124 558.784533679485 8703717.25 21589.0 nc|ENSG00000173193|Q460N5-3|PARP14;;nc|ENSG00000173200|Q460N3-2|PARP15;;nc|ENSG00000173193|Q460N5-1|PARP14;;ENSG00000173193|ENST00000474629|PARP14;;ENSG00000173200|ENST00000464300|PARP15;;nc|ENSG00000173193|Q460N5-5|PARP14 5.615607738494873 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21593 107.23 240.0 283270.0 25 0 44024.0 + 44354 YLQVQKLDI 9 62 560.3239367948154 1118.633320656431 2 560.3238403201103 MULTI CID FTMS 0 0 0 21592 215849.078125 0.2763920701002942 -25 0.1974868774414062 1 Unmodified _YLQVQKLDI_ ENSG00000112499|ENST00000366953|SLC22A2 32.30548876998284 0.1201446275138228 3 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L} 9 4 + 71.092 0.0 0.0 6.3553 6.3553 93.446 0.0 0.0 0.0 17.956349637772746 59.98319373273603 17.956349637772746 71.09243748081781 0 1.3494850021680094 1.5228787452803376 0.0 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L} 6.3553 - 79 1 2.304 56620.2 1.0 15358 6233 21592 HBL1_DMSO_200M_050219_1,21593 HBL1_DMSO_200M_050219_1,21593,YLQVQKLDI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21594 107.24 800.0 69128.0 25 0 12061.0 + 21377 LPFRVLLV 8 59 478.818484996075 955.62241705895 2 478.8181945681572 MULTI CID FTMS 0 0 0 21592 101928.8125 0.6192494785672437 17 -0.1486587524414062 2 Unmodified _LPFRVLLV_ ENSG00000005448|ENST00000348227|WDR54;ENST00000461531.5_1_2:74648856-74650350:+|nuORF;ENST00000469932.5_1_2:74649280-74650140:+|nuORF;nc|ENSG00000005448|Q9H977-3|WDR54;nc|ENSG00000005448|Q9H977-4|WDR54 50.855029805455786 0.1352255786796883 3 {I|L}{I|L}MRV{I|L}{I|L}V 8 2 + 45.5 0.0 0.0 4.7613 4.7613 87.605 0.0 0.0 0.0 4.781381439366186 3.315921228226131 3.315921228226131 45.49980340329462 0 1.1677353201839438 1.2218487496163564 0.0 0.0 {I|L}{I|L}MRV{I|L}{I|L}V 4.7613 - 71 1 2.304 48105.6 0.4000000059604645 15359 6233 21592 HBL1_DMSO_200M_050219_1,21594 HBL1_DMSO_200M_050219_1,21594,LPFRVLLV False True LPFRVLLV 107.24208 478.818194568157 2498337.75 21592.0 ENSG00000005448|ENST00000348227|WDR54;;ENST00000461531.5_1_2:74648856-74650350:+|nuORF;;nc|ENSG00000005448|Q9H977-3|WDR54;;ENST00000469932.5_1_2:74649280-74650140:+|nuORF;;nc|ENSG00000005448|Q9H977-4|WDR54 6.485959847768148 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21595 107.26 800.0 111680.0 25 0 13683.0 + 10912 GAIPAFISL 9 88 888.518075120901 887.510798654301 1 888.5192138552666 MULTI CID FTMS 0 0 0 21592 80511.3515625 0.7919741083113203 4 -0.059234619140625 3 Unmodified _GAIPAFISL_ ENSG00000182481|ENST00000330459|KPNA2 42.09456458481378 0.0639583784996157 3 [PA]{M(Oxidation (M))|F}{I|L}Q{I|L}S{I|L} 8 5 + 51.631 0.0 0.0 5.8175 5.8175 77.344 0.0 0.0 0.0 6.989700043360188 20.60016905927597 6.989700043360188 1.3033376849500655 0 0.3494850021680094 0.0 0.0 0.0 [PA]{M(Oxidation (M))|F}{I|L}Q{I|L}S{I|L};[PA]{M(Oxidation (M))|F}{I|L}GA{I|L}S{I|L};[PA]{M(Oxidation (M))|F}{I|L}QS{I|L}{I|L};[PA]{M(Oxidation (M))|F}{I|L}SQ{I|L}{I|L};[PA]{M(Oxidation (M))|F}{I|L}GAS{I|L}{I|L};[PA]{M(Oxidation (M))|F}Q{I|L}{I|L}S{I|L};[PA]{M(Oxidation (M))|F}{I|L}{I|L}QS{I|L};[PA]{M(Oxidation (M))|F}Q{I|L}S{I|L}{I|L};[PA]{M(Oxidation (M))|F}{I|L}S{I|L}Q{I|L};[PA]Q{I|L}{M(Oxidation (M))|F}{I|L}S{I|L} 5.8175;5.6706;5.4287;5.3201;5.2819;5.2799;4.9407;4.8911;4.8667;4.8545 -;-;-;-;-;-;-;-;-;- 948 1 2.304 64425.1 0.3300000131130218 15360 6233 21592 HBL1_DMSO_200M_050219_1,21595 HBL1_DMSO_200M_050219_1,21595,GAIPAFISL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21599 107.28 800.0 257200.0 25 0 66332.0 + 15552 IPWPGTLAI 9 83 967.5611663285686 966.5538898619684 1 967.5616943240166 MULTI CID FTMS 0 0 0 21598 160238.640625 0.7544485716288836 23 -0.2233200073242187 1 Unmodified _IPWPGTLAI_ ENSG00000135365|ENST00000676320|PHF21A;ENST00000527401.5_1_11:45957138-45987102:-|nuORF;nc|ENSG00000135365|Q96BD5-2|PHF21A;nc|ENSG00000135365|Q96BD5|PHF21A 101.72198241140316 0.010086100337927 3 [{I|L}P]WPGT{I|L}A{I|L} 9 0 + 73.316 0.0 0.0 7.5853 7.5853 80.877 0.0 0.0 0.0 7.2184874961635614 14.973024840566469 7.2184874961635614 0.3997654084889035 0 1.0 1.5228787452803376 1.079689690656103 0.0 + + [{I|L}P]WPGT{I|L}A{I|L};[{I|L}P]ASWP{I|L}A{I|L};[{I|L}P]ASA{I|L}WP{I|L};[{I|L}P]ASAWP{I|L}{I|L};[{I|L}P]WPGTA{I|L}{I|L};[{I|L}P]ASAW{I|L}P{I|L};[{I|L}P]ASWPA{I|L}{I|L};[{I|L}P]AS{I|L}AWP{I|L};[WP]{I|L}PGT{I|L}A{I|L};[{I|L}P]W{[SA]|[TG]}P{I|L}A{I|L} 7.5853;7.5439;7.3873;7.2097;7.1107;7.0758;7.0694;6.998;6.8385;6.4796 +;-;-;-;-;-;-;-;-;- + 2868 1 2.304 140370.0 0.9800000190734864 15361 6236 21598 HBL1_DMSO_200M_050219_1,21599 HBL1_DMSO_200M_050219_1,21599,IPWPGTLAI True True IPWPGTLAI 107.28047 967.561694324017 2305349.5 21598.0 nc|ENSG00000135365|Q96BD5|PHF21A;;ENST00000527401.5_1_11:45957138-45987102:-|nuORF;;nc|ENSG00000135365|Q96BD5-2|PHF21A;;ENSG00000135365|ENST00000676320|PHF21A 6.165319760640462 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21604 107.31 800.0 237640.0 25 0 39846.0 44299 YLLPQEEQP 9 105 1116.5614069153137 1115.5541304487135 1 1118.568286120892 MULTI CID FTMS 0 0 0 21603 128568.6953125 0.7196129686758683 -9 0.0899810791015625 1 Unmodified _YLLPQEEQP_ ENSG00000103404|ENST00000219689|USP31 20.453626601364224 0.2830276176381075 3 EPTTA{I|L}PY[QP] 10 8 + 42.072 0.0 0.0 3.7714 3.7714 76.075 0.0 0.0 0.0 12.465116631629265 6.823033561788989 6.823033561788989 4.771212547196626 0 0.3935078169319297 0.0 0.2396518287104437 1.2887254899964358 EPTTA{I|L}PY[QP];EPTT{I|L}APY[QP];EPTAT{I|L}PY[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}YP[R{M(Oxidation (M))|F}]QY;[EP]Y{I|L}AYVVY;YT{I|L}{NN|[MP]|[D{I|L}]|[EV]}M{I|L}[{M(Oxidation (M))|F}T];YT{I|L}[YT]{I|L}{M(Oxidation (M))|F}[VP];YE{I|L}{I|L}SM{I|L}[{M(Oxidation (M))|F}T];[EP]Y{I|L}AY{I|L}[{M(Oxidation (M))|F}T];YE{I|L}VTM{I|L}[{M(Oxidation (M))|F}T] 3.7714;3.3437;3.3082;2.3808;2.1961;2.1748;2.0017;1.9667;1.9518;1.9208 -;-;-;-;-;-;-;-;-;- 5162 + 1 2.304 122164.6 0.4099999964237213 15362 6240 21603 HBL1_DMSO_200M_050219_1,21604 HBL1_DMSO_200M_050219_1,21604,YLLPQEEQP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21608 107.33 800.0 102100.0 25 0 22958.0 3503 CNCPIIGEIV 10 86 530.761910874484 1059.509268815768 2 530.7617065310478 MULTI CID FTMS 0 0 0 21607 83722.15625 0.5741065548986611 3 -0.0244979858398437 1 Unmodified _CNCPIIGEIV_ nc|ENSG00000132204|Q9BZP3-2|LINC00470;nc|ENSG00000132204|Q9BZP3|LINC00470 10.823927491677226 0.6659270209832991 3 {NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C))Q]{[CP]|[EA]}{I|L}{I|L}V 9 5 {NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C))Q]{[CP]|[EA]}{I|L} + + 16.454 15.135 1.825 1.553 1.553 48.562 0.0 0.0 0.0 0.0 -7.191512336730028 -7.191512336730028 0.0 0 0.0 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C))Q]{[CP]|[EA]}{I|L}{I|L}V 1.553 - 108 + 1 2.304 70344.2 0.3499999940395355 15363 6243 21607 HBL1_DMSO_200M_050219_1,21608 HBL1_DMSO_200M_050219_1,21608,CNCPIIGEIV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 21614 107.37 800.0 134170.0 25 0 9690.2 -1 0 100 827.3953017656797 3305.5521011963187 4 827.6466552615166 MULTI CID FTMS 0 0 0 21613 56263.61328125 0.0358917370220367 -61 0.4937515258789062 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 54.333 0.0 0.0 1.6437 0.0 0.0 0.0 2264.9324472258686 2264.9324472258686 27.88795539246969 0.0 0.0 0.0 0 1.5 0.0 0.25 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.6437 - 642 1 2.304 83996.7 0.2800000011920929 15364 6248 21613 HBL1_DMSO_200M_050219_1,21614 HBL1_DMSO_200M_050219_1,21614, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21617 107.39 800.0 141310.0 25 0 11354.0 -1 0 75 1102.8576186457892 3305.551026537568 3 1103.526538074017 MULTI CID FTMS 0 0 0 21616 130162.71875 0.1039038516303787 -21 0.21026611328125 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 46.833 0.0 0.0 1.4168 0.0 0.0 0.0 2264.9383433241587 2264.9383433241587 18.945247061488857 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.4168 - 222 1 2.304 81466.7 0.4000000059604645 15365 6250 21616 HBL1_DMSO_200M_050219_1,21617 HBL1_DMSO_200M_050219_1,21617, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21620 107.4 491.0 333480.0 25 0 46568.0 + 14663 IIPEGGLFTVV 11 88 1144.6608498317923 1143.6535733651924 1 1144.663134753704 MULTI CID FTMS 0 0 0 21619 155021.75 0.3807837133407969 -66 0.551910400390625 1 Unmodified _IIPEGGLFTVV_ ENST00000563686.5_1_18:52942938-53070719:-|nuORF 78.7280429016045 0.0086025745061204 3 [EP]GG{I|L}{M(Oxidation (M))|F}TV{I|L}{I|L}V 11 4 + 78.246 0.0 0.0 6.8418 6.8418 80.346 0.0 0.0 0.0 13.1420954521829 48.68244252775045 13.1420954521829 1.2371250542002343 0 0.0 0.0 2.3076556684809653 0.0 [EP]GG{I|L}{M(Oxidation (M))|F}TV{I|L}{I|L}V;[EP]GG{I|L}{M(Oxidation (M))|F}T{I|L}{I|L}VV;[EP]GG{I|L}{I|L}{I|L}{M(Oxidation (M))|F}TVV;[EP]GG{I|L}{M(Oxidation (M))|F}T{I|L}V{I|L}V;[EP]GG{I|L}{M(Oxidation (M))|F}{I|L}{I|L}TVV;[EP]GG{I|L}{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}V;[EP]GG{I|L}{M(Oxidation (M))|F}{I|L}S{I|L}{I|L}V;[EP]N{I|L}{M(Oxidation (M))|F}TV{I|L}{I|L}V;[EP]GG{I|L}{M(Oxidation (M))|F}{I|L}{I|L}S{I|L}V;[EP]GG{I|L}{M(Oxidation (M))|F}{I|L}T{I|L}VV 6.8418;6.7336;6.6662;6.5162;6.4693;6.4487;6.2953;6.2668;6.2519;6.1871 -;-;-;-;-;-;-;-;-;- 3253 1 2.304 104908.2 1.0 15366 6252 21619 HBL1_DMSO_200M_050219_1,21620 HBL1_DMSO_200M_050219_1,21620,IIPEGGLFTVV True True IIPEGGLFTVV 107.40161 1144.6631347537 11036642.0 21619.0 ENST00000563686.5_1_18:52942938-53070719:-|nuORF 5.235958894093831 1.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21621 107.41 236.0 205340.0 25 0 19481.0 + 10607 FVLPELPSV 9 69 500.78893037368704 999.563307814174 2 500.7895080447197 MULTI CID FTMS 0 0 0 21619 139497.21875 0.2501033153469009 -38 0.3425827026367187 2 Unmodified _FVLPELPSV_ ENSG00000182149|ENST00000378799|IST1;ENST00000536027.1_1_16:71958181-71961713:+|nuORF;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 23.1484247019978 0.2366544122328345 3 {[TV]|[{I|L}S]}T 3 7 27.113 0.0 0.0 2.7125 0.0 0.0 0.0 695.3763356106052 695.3763356106052 12.508695427693777 0.0 0.0 0.0 0 0.0 2.0 0.5941876774005249 0.0 {[TV]|[{I|L}S]}T 2.7125 - 62 1 2.304 40757.1 1.0 15367 6252 21619 HBL1_DMSO_200M_050219_1,21621 HBL1_DMSO_200M_050219_1,21621,FVLPELPSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21622 107.42 779.0 215760.0 25 0 35565.0 + 19988 LILDPIFKV 9 106 529.3365983139639 1056.6586436947275 2 529.3365966677666 MULTI CID FTMS 0 0 0 21619 113304.5078125 0.2581127954170855 -20 0.1837997436523437 3 Unmodified _LILDPIFKV_ ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF 60.07390631473393 0.0260411565414776 3 {I|L}{I|L}{I|L}DP{I|L} 6 3 73.831 0.0 0.0 6.9872 0.0 0.0 0.0 389.2196857324461 389.2196857324461 38.38090859114196 0.0 0.0 0.0 0 1.285666875892183 2.0 0.3807196863200844 0.0 + {I|L}{I|L}{I|L}DP{I|L} 6.9872 + + 1339 + 1 2.304 132132.4 1.0 15368 6252 21619 HBL1_DMSO_200M_050219_1,21622 HBL1_DMSO_200M_050219_1,21622,LILDPIFKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21623 107.43 573.0 145060.0 25 0 10485.0 + 18305 KVLDIMPLTL 10 111 571.8465962597112 1141.6786395862223 2 571.8461791872978 MULTI CID FTMS 0 0 0 21619 93093.2578125 0.0623448538330881 -36 0.3344497680664062 4 Unmodified _KVLDIMPLTL_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 57.24910588100465 0.0438022649904578 3 [{I|L}P]T{I|L}{M(Oxidation (M))|F}K[{I|L}P]T{I|L} 10 4 + 69.87 0.0 0.0 6.1199 6.1199 77.901 0.0 0.0 0.0 1.0870607406712338 16.53212513775344 1.0870607406712338 1.0870607406712338 0 1.3494850021680094 1.6989700043360187 0.0 0.0 [{I|L}P]T{I|L}{M(Oxidation (M))|F}K[{I|L}P]T{I|L};{I|L}{I|L}TQ{I|L}M[{I|L}P]T{I|L};[{I|L}T]{I|L}Q{I|L}M[{I|L}P]T{I|L};[{I|L}T]P{I|L}{M(Oxidation (M))|F}K[{I|L}P]T{I|L};{I|L}{I|L}TP{M(Oxidation (M))|F}K[{I|L}P]T{I|L};[{I|L}T]{I|L}P{M(Oxidation (M))|F}K[{I|L}P]T{I|L};[{I|L}P]T{I|L}{M(Oxidation (M))|F}K[TP]{I|L}{I|L};{I|L}{I|L}T[AG]{I|L}M[{I|L}P]T{I|L};{I|L}{I|L}TQ{I|L}M[TP]{I|L}{I|L};{I|L}{I|L}TQM{I|L}[{I|L}P]T{I|L} 6.1199;6.0247;5.7856;5.6171;5.5926;5.3535;5.2641;5.222;5.1689;5.1639 -;-;-;-;-;-;-;-;-;- 2335 1 2.304 69813.5 1.0 15369 6252 21619 HBL1_DMSO_200M_050219_1,21623 HBL1_DMSO_200M_050219_1,21623,KVLDIMPLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21626 107.45 800.0 84222.0 25 0 13287.0 + 4060 DAMDSTILDL 10 88 547.2578320635142 1092.5011111938284 2 547.2586547732353 MULTI CID FTMS 0 0 0 21625 86194.9453125 0.7378047043425472 -18 0.1695709228515625 1 Unmodified _DAMDSTILDL_ REV__ENSG00000164465|ENST00000338728|DCBLD1 10.073929032068715 0.6785112666868882 3 {[DA]|[EG]}M 3 -1 29.437 0.0 0.0 2.6945 0.0 0.0 0.0 772.3734005827533 772.3734005827533 9.771212547196622 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}M 2.6945 + + 83 1 2.304 55942.1 0.3400000035762787 15370 6254 21625 HBL1_DMSO_200M_050219_1,21626 HBL1_DMSO_200M_050219_1,21626,DAMDSTILDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21627 107.46 496.0 26421.0 25 0 1426.4 -1 0 38 922.4469349606526 3685.75863397621 4 922.9506713747978 MULTI CID FTMS 0 0 0 21625 75760.921875 1.0 0 0.0 2 3 Y 1 -1 6.9897 0.0 0.0 0.18964 0.0 0.0 2860.3155320248416 659.3519991510374 3519.667531175879 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.18964 - 5 + 1 2.304 22944.4 1.0 15371 6254 21625 HBL1_DMSO_200M_050219_1,21627 HBL1_DMSO_200M_050219_1,21627, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21632 107.49 800.0 204780.0 25 0 21038.0 + 26279 NQTEEDILV 9 137 1060.515502401934 1059.508225935334 1 1060.516040027142 MULTI CID FTMS 0 0 0 21631 124007.59375 0.353636448702239 25 -0.1728363037109375 1 Unmodified _NQTEEDILV_ ENSG00000166394|ENST00000299498|CYB5R2;nc|ENSG00000166394|Q6BCY4-2|CYB5R2 43.85829265575387 0.0542763391141878 3 [QP][C(Carbamidomethyl (C))C]{I|L}D{I|L}{I|L}V 9 4 + 66.603 0.0 0.0 6.2862 6.2862 84.738 0.0 0.0 0.0 7.90816854212089 16.478174818886373 7.90816854212089 5.409393809954892 0 0.0 0.0 0.9361818737241736 1.836696871556164 [QP][C(Carbamidomethyl (C))C]{I|L}D{I|L}{I|L}V;[QP][C(Carbamidomethyl (C))C]D{I|L}{I|L}{I|L}V;[QP][C(Carbamidomethyl (C))C]EV{I|L}{I|L}V;[QP][C(Carbamidomethyl (C))C]{I|L}{I|L}D{I|L}V;{[QS]|[NT]}D[DG]VD{I|L}{I|L}V;[QP][C(Carbamidomethyl (C))C]{I|L}EV{I|L}V;{[QS]|[NT]}D[DG]DV{I|L}{I|L}V;{[QS]|[NT]}D[DG]V{I|L}D{I|L}V;[QP][C(Carbamidomethyl (C))C]E{I|L}V{I|L}V;C(Carbamidomethyl (C))C(Carbamidomethyl (C))[PA]{I|L}D{I|L}{I|L}V 6.2862;5.7756;5.6951;5.6319;5.5398;5.2792;4.9487;4.8855;4.6881;4.5527 -;-;-;-;-;-;-;-;-;- 1171 1 2.304 111496.0 0.4000000059604645 15372 6258 21631 HBL1_DMSO_200M_050219_1,21632 HBL1_DMSO_200M_050219_1,21632,NQTEEDILV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21634 107.49 76.0 839700.0 25 0 127960.0 + 32014 RVIDYILDL 9 56 560.3239367948154 1118.633320656431 2 560.3240234255791 MULTI CID FTMS 0 0 0 21633 521934.34375 0.6683304602392591 1 -0.004791259765625 1 Unmodified _RVIDYILDL_ ENSG00000117318|ENST00000374561|ID3 19.361941925380144 0.3125782356748823 3 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L} 9 3 + 66.845 0.0 0.0 5.9756 5.9756 92.2 0.0 0.0 0.0 19.638787285696964 56.38743756437101 19.638787285696964 66.84501246997776 0 0.9247425010840048 1.5228787452803376 0.0 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L} 5.9756 - 38 1 2.304 57184.5 1.0 15373 6259 21633 HBL1_DMSO_200M_050219_1,21634 HBL1_DMSO_200M_050219_1,21634,RVIDYILDL False True RVIDYILDL 107.49217 560.324023425579 19518742.5 21633.0 ENSG00000117318|ENST00000374561|ID3;;ID3|p.I69T|1|0.57|ENSG00000117318|chr1:23559221-23559221|A/G|missense_variant 3.8498826026916495 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21639 107.52 800.0 82441.0 25 0 9748.9 -1 MPLERMKGIS 10 99 589.3073844073596 1176.600215881519 2 589.3072387576103 MULTI CID FTMS 0 0 0 21638 12298.8046875 0.0429524364671068 -29 0.2481536865234375 1 Oxidation (M) _MPLERM(Oxidation (M))KGIS_ ENSG00000174292|ENST00000688331|TNK1;nc|ENSG00000174292|Q13470|TNK1 24.99096001346401 0.4071966087057876 3 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L} 9 -1 + 87.705 0.0 0.0 7.4541 7.4541 83.463 0.0 0.0 0.0 30.457574905606748 2.04119982655925 2.04119982655925 2.04119982655925 0 1.5669015600442575 1.3979400086720375 0.3494850021680094 0.25 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L};MP{I|L}E{M(Oxidation (M))|F}NW{I|L}K;MP{I|L}E{M(Oxidation (M))|F}GGWK{I|L};MP{I|L}E{M(Oxidation (M))|F}GGW{I|L}K;[{I|L}P]E{M(Oxidation (M))|F}NM{[SA]|[TG]}[R{I|L}];[{I|L}P]E{M(Oxidation (M))|F}N{[SA]|[TG]}M[R{I|L}];{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}NM{[SA]|[TG]}[R{I|L}];[{I|L}P]E{M(Oxidation (M))|F}GGM{[SA]|[TG]}[R{I|L}];{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}N{[SA]|[TG]}M[R{I|L}];[{I|L}P]E{M(Oxidation (M))|F}GG{[SA]|[TG]}M[R{I|L}] 7.4541;7.2806;6.6715;6.498;3.8388;3.4091;2.9651;2.6989;2.5353;2.2692 -;-;-;-;-;-;-;-;-;- 839 + 1 2.304 55078.7 0.3400000035762787 15374 6263 21638 HBL1_DMSO_200M_050219_1,21639 HBL1_DMSO_200M_050219_1,21639,MPLERMKGIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21644 107.55 800.0 10938.0 25 0 1093.3 -1 0 20 1162.1372085861165 0 1162.333544909954 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.304 15748.3 0.2899999916553497 15375 6267 21643 HBL1_DMSO_200M_050219_1,21644 HBL1_DMSO_200M_050219_1,21644, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21650 107.58 800.0 68166.0 25 0 11271.0 + 2890 AVFDQIIEL 9 88 524.2894705770734 1046.5643882209467 2 524.2895995974541 MULTI CID FTMS 0 0 0 21649 59995.98046875 0.6652848519564064 1 -0.0163803100585937 1 Unmodified _AVFDQIIEL_ ENSG00000126216|ENST00000261965|TUBGCP3;nc|ENSG00000126216|Q96CW5-2|TUBGCP3 26.88365393820708 0.1891292719743517 3 {[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}G{I|L} 6 7 44.94 0.0 0.0 4.2941 0.0 0.0 0.0 370.19741979737177 370.19741979737177 29.36690318332652 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2059771852360797 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}G{I|L} 4.2941 - 197 1 2.304 50838.5 0.3300000131130218 15376 6272 21649 HBL1_DMSO_200M_050219_1,21650 HBL1_DMSO_200M_050219_1,21650,AVFDQIIEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21655 107.61 800.0 50567.0 25 0 2279.4 -1 0 59 1173.5435913725669 3517.608944717901 3 1173.878100574017 MULTI CID FTMS 0 0 0 21654 45300.79296875 0.6011836944633573 -12 0.0729904174804687 1 3 D{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 -1 9.2968 0.0 0.0 0.26429 0.0 0.0 2586.148936028251 519.2791842096311 3105.428120237882 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{M(Oxidation (M))|F}{M(Oxidation (M))|F} 0.26429 - 124 + 1 2.304 32715.4 0.2899999916553497 15377 6276 21654 HBL1_DMSO_200M_050219_1,21655 HBL1_DMSO_200M_050219_1,21655, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21657 107.62 61.0 2240200.0 25 0 151510.0 -1 0 100 827.3953017656797 3305.5521011963187 4 827.6464721560478 MULTI CID FTMS 0 0 0 21656 1563602.625 0.9974548549331902 -32 0.2737503051757812 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 55.111 0.0 0.0 1.6672 0.0 0.0 0.0 2264.935779614188 2264.935779614188 23.207701667301453 0.0 0.0 0.0 0 1.924742501084005 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.6672 - 1041 1 2.304 107715.3 1.0 15378 6277 21656 HBL1_DMSO_200M_050219_1,21657 HBL1_DMSO_200M_050219_1,21657, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21661 107.63 105.0 1429000.0 25 0 119240.0 -1 0 74 1102.8576186457892 3305.551026537568 3 1103.526660144329 MULTI CID FTMS 0 0 0 21660 1087436.25 0.8680581956382607 9 -0.075347900390625 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 49.843 0.0 0.0 1.5079 0.0 0.0 0.0 2264.9352223918577 2264.9352223918577 19.13734275855269 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.5079 - 202 1 2.304 106545.4 1.0 15379 6280 21660 HBL1_DMSO_200M_050219_1,21661 HBL1_DMSO_200M_050219_1,21661, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21662 107.64 368.0 200050.0 25 0 13883.0 + 33671 SIVSELAGL 9 92 888.5039130338405 887.4966365672404 1 888.5054809451103 MULTI CID FTMS 0 0 0 21660 127512.0234375 0.7442008419619661 -2 0.0079498291015625 2 Unmodified _SIVSELAGL_ ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3 88.90359156742426 0.0153595091083554 3 {[TV]|[{I|L}S]}EVS{I|L}AG{I|L} 9 2 + 79.069 0.0 0.0 8.9092 8.9092 84.146 0.0 0.0 0.0 8.063273204314655 14.09256854528806 8.063273204314655 1.0735731609544672 0 1.079689690656103 0.8239087409443188 2.274227503252014 0.0 {[TV]|[{I|L}S]}EVS{I|L}AG{I|L};{[TV]|[{I|L}S]}VSE{I|L}AG{I|L};{[TV]|[{I|L}S]}VES{I|L}AG{I|L};[VS]{I|L}SE{I|L}AG{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}VS{I|L}AG{I|L};[VS]{I|L}ES{I|L}AG{I|L};{[TV]|[{I|L}S]}EVSA{I|L}G{I|L};{[TV]|[{I|L}S]}EVS{I|L}Q{I|L};{[TV]|[{I|L}S]}VSEA{I|L}G{I|L};{[TV]|[{I|L}S]}VSE{I|L}Q{I|L} 8.9092;8.7882;8.5015;8.0006;7.7874;7.7139;7.6674;7.5613;7.5464;7.4403 -;+;-;-;-;-;-;-;-;- + 1853 1 2.304 55091.1 1.0 15380 6280 21660 HBL1_DMSO_200M_050219_1,21662 HBL1_DMSO_200M_050219_1,21662,SIVSELAGL True True SIVSELAGL 107.63568 888.50548094511 1284277.875 21660.0 ENSG00000168610|ENST00000264657|STAT3;;nc|ENSG00000168610|P40763-2|STAT3;;nc|ENSG00000168610|P40763-3|STAT3 3.7575104236602783 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21666 107.66 705.0 272490.0 25 0 20253.0 + 3210 AWIDGVLDM 9 110 1019.4862161805404 1018.4789397139403 1 1019.487231433392 MULTI CID FTMS 0 0 0 21665 97757.671875 0.141175945759476 -26 0.1768951416015625 1 Unmodified _AWIDGVLDM_ ENSG00000165934|ENST00000298875|CPSF2 85.27202061508552 0.0162393975915471 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DGV{I|L}DM 9 0 + 76.538 0.0 0.0 7.5149 7.5149 82.864 0.0 0.0 0.0 11.10090730078629 16.478174818886373 11.10090730078629 1.706962271689747 0 1.5471062485323517 1.3010299956639813 0.5994850021680094 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DGV{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DR{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}RD{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DGV{I|L}{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DR{I|L}{I|L}DM;{NN|[MP]|[D{I|L}]|[EV]}GVAW{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}EAA{I|L}DM;{NN|[MP]|[D{I|L}]|[EV]}NW{I|L}{I|L}DM;[VG]D{I|L}AW{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VG]D{I|L}{I|L}DM 7.5149;7.3473;6.8551;6.721;6.6761;6.425;6.4141;6.3516;6.2574;6.2105 +;-;-;-;-;-;-;-;-;- + 6883 1 2.304 127586.2 1.0 15381 6283 21665 HBL1_DMSO_200M_050219_1,21666 HBL1_DMSO_200M_050219_1,21666,AWIDGVLDM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21667 107.67 800.0 171490.0 25 0 12738.0 + 14111 IATIALMI 8 96 845.5164499297747 844.5091734631746 1 845.5171386599541 MULTI CID FTMS 0 0 0 21665 93519.375 0.0649483628590388 -34 0.2779693603515625 2 Unmodified _IATIALMI_ chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS;nc|ENSG00000119969|Q9NRZ9-7|HELLS;nc|ENSG00000119969|Q9NRZ9-8|HELLS 78.44472497914707 0.0986812004920242 3 [{I|L}T]AA{I|L}{I|L}M{I|L} 8 3 + 77.445 0.0 0.0 9.1704 9.1704 84.121 0.0 0.0 0.0 0.9550611459063844 14.904630595263413 0.9550611459063844 0.9550611459063844 0 0.3494850021680094 1.5228787452803376 2.5356668758921828 0.0 [{I|L}T]AA{I|L}{I|L}M{I|L};[{I|L}A]TA{I|L}{I|L}M{I|L};[{I|L}T]A{I|L}A{I|L}M{I|L};[{I|L}A]T{I|L}A{I|L}M{I|L};[{I|L}T]AA{I|L}M{I|L}{I|L};[{I|L}A]TA{I|L}M{I|L}{I|L};[{I|L}T]A{I|L}AM{I|L}{I|L};[{I|L}A]T{I|L}AM{I|L}{I|L};[{I|L}A]{I|L}TA{I|L}M{I|L};[{I|L}A]AT{I|L}{I|L}M{I|L} 9.1704;9.0573;8.6576;8.5445;8.5195;8.4065;8.0067;7.8936;7.596;7.5886 -;-;-;+;-;-;-;-;-;- + 1141 1 2.304 96259.6 0.3400000035762787 15382 6283 21665 HBL1_DMSO_200M_050219_1,21667 HBL1_DMSO_200M_050219_1,21667,IATIALMI True True IATIALMI 107.67247 845.517138659954 20546654.0 21665.0 chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;;nc|ENSG00000119969|Q9NRZ9-5|HELLS;;nc|ENSG00000119969|Q9NRZ9-2|HELLS;;nc|ENSG00000119969|Q9NRZ9-3|HELLS;;nc|ENSG00000119969|Q9NRZ9-6|HELLS;;nc|ENSG00000119969|Q9NRZ9-7|HELLS;;ENSG00000119969|ENST00000348459|HELLS;;nc|ENSG00000119969|Q9NRZ9-4|HELLS;;nc|ENSG00000119969|Q9NRZ9-8|HELLS 1.2549898425738018 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21669 107.68 42.0 1182900.0 25 0 91099.0 + 18306 KVLDIMPLTL 10 88 571.8465962597112 1141.6786395862223 2 571.8465453982353 MULTI CID FTMS 0 0 0 21668 1240758.5 0.8309399535728248 -4 0.0485305786132812 1 Unmodified _KVLDIMPLTL_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 51.41523569358685 0.0718446036348414 3 [{I|L}P]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P{I|L}T{I|L} 10 5 + 67.07 0.0 0.0 5.8747 5.8747 75.645 0.0 0.0 0.0 1.4692311945508152 10.452490459521968 1.4692311945508152 0.2422750325201406 0 1.242992819099939 2.0 0.75 0.3494850021680094 [{I|L}P]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P{I|L}T{I|L};[{I|L}P]T{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}T]{I|L}Q{I|L}MP{I|L}T{I|L};[{I|L}T]{I|L}QM{I|L}P{I|L}T{I|L};[{I|L}T]P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P{I|L}T{I|L};[{I|L}T]P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}T]{I|L}[AG]{I|L}MP{I|L}T{I|L};[{I|L}T]{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}T]{I|L}[AG]M{I|L}P{I|L}T{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}[YV]P{I|L}T{I|L} 5.8747;5.8535;5.746;5.4337;5.3025;5.2813;4.6371;4.3819;4.3249;3.6848 -;-;-;-;-;-;-;-;-;- 728 1 2.304 46829.4 1.0 15383 6284 21668 HBL1_DMSO_200M_050219_1,21669 HBL1_DMSO_200M_050219_1,21669,KVLDIMPLTL True True KVLDIMPLTL 107.67755 571.846545398235 31692807.0 21668.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 5.140379587809245 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21670 107.68 89.0 610370.0 25 0 45861.0 + 10608 FVLPELPSV 9 85 500.78893037368704 999.563307814174 2 500.7889587283134 MULTI CID FTMS 0 0 0 21668 478285.46875 0.8575137374674114 -6 0.0564804077148437 2 Unmodified _FVLPELPSV_ ENSG00000182149|ENST00000378799|IST1;ENST00000536027.1_1_16:71958181-71961713:+|nuORF;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 36.04419817259434 0.0971720506436186 3 {[TV]|[{I|L}S]}TW 4 8 24.754 0.0 0.0 2.4765 0.0 0.0 0.0 509.2916763046617 509.2916763046617 5.632220458028087 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.3807196863200844 0.0 {[TV]|[{I|L}S]}TW 2.4765 - 365 1 2.304 47422.9 1.0 15384 6284 21668 HBL1_DMSO_200M_050219_1,21670 HBL1_DMSO_200M_050219_1,21670,FVLPELPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21671 107.68 192.0 335670.0 25 0 56967.0 + 19989 LILDPIFKV 9 59 529.3365983139639 1056.6586436947275 2 529.3367187380791 MULTI CID FTMS 0 0 0 21668 259155.1875 0.5903672429622817 12 -0.0672073364257812 3 Unmodified _LILDPIFKV_ ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF 38.17557092003332 0.0854718145212029 3 {I|L}{I|L}{I|L}DP{I|L}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 75.283 0.0 0.0 7.1247 7.1247 94.717 0.0 0.0 0.0 46.61114057108961 6.751736484954378 6.751736484954378 32.67342849135353 0 0.805462187404089 2.0 0.0 0.2614393726401688 + + {I|L}{I|L}{I|L}DP{I|L}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}[{M(Oxidation (M))|F}V]V[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7.1247;4.0325 +;- + 144 + 1 2.304 56634.0 1.0 15385 6284 21668 HBL1_DMSO_200M_050219_1,21671 HBL1_DMSO_200M_050219_1,21671,LILDPIFKV True True LILDPIFKV 107.68322 529.336718738079 5526560.0 21668.0 ENSG00000167658|ENST00000309311|EEF2;;ENST00000598182.5_1_19:3980752-3982305:-|nuORF 5.958121299743652 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21679 107.72 800.0 92063.0 25 0 12768.0 + 24588 MLIEVIEKL 9 85 544.3252399254943 1086.6359269177883 2 544.3262817263603 MULTI CID FTMS 0 0 0 21678 66619.984375 0.3700809231054731 -18 0.1244659423828125 1 Unmodified _MLIEVIEKL_ ENSG00000132842|ENST00000255194|AP3B1;nc|ENSG00000132842|O00203-3|AP3B1 61.60191391372663 0.0251951588191061 3 M{I|L}{I|L}EV{I|L}EK{I|L} 9 0 + 98.114 0.0 0.0 9.0291 9.0291 96.892 0.0 0.0 0.0 58.997723915880144 11.527785281594008 11.527785281594008 16.114079997524783 0 1.4559771852360797 2.0 0.805462187404089 0.2134679910804404 + + M{I|L}{I|L}EV{I|L}EK{I|L};M{I|L}{I|L}EV{I|L}{[VA]|[{I|L}G]}S{I|L};M{I|L}{I|L}[R{M(Oxidation (M))|F}][{I|L}V][VP] 9.0291;7.5462;3.4243 +;-;- + 323 + 1 2.304 61963.5 0.8899999856948853 15386 6291 21678 HBL1_DMSO_200M_050219_1,21679 HBL1_DMSO_200M_050219_1,21679,MLIEVIEKL True True MLIEVIEKL 107.7236 544.32628172636 898785.8125 21678.0 ENSG00000132842|ENST00000255194|AP3B1;;nc|ENSG00000132842|O00203-3|AP3B1 5.476813634236653 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21685 107.75 353.0 209890.0 25 0 32601.0 + 32015 RVIDYILDL 9 65 560.3239367948154 1118.633320656431 2 560.3245117068291 MULTI CID FTMS 0 0 0 21684 154182.546875 0.1974288409026157 38 -0.3782119750976562 1 Unmodified _RVIDYILDL_ ENSG00000117318|ENST00000374561|ID3 29.84058131909904 0.1515068451768857 3 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L} 9 3 + 70.34 0.0 0.0 6.288 6.288 93.193 0.0 0.0 0.0 22.471799572732465 59.37076236157729 22.471799572732465 70.33986249165785 0 1.274227503252014 1.5228787452803376 0.0 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L} 6.288 - 89 1 2.304 61707.3 1.0 15387 6296 21684 HBL1_DMSO_200M_050219_1,21685 HBL1_DMSO_200M_050219_1,21685,RVIDYILDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21689 107.77 279.0 171100.0 25 0 19092.0 -1 MPLERMKGIS 10 83 589.3073844073596 1176.600215881519 2 589.3076660037041 MULTI CID FTMS 0 0 0 21688 162969.359375 0.5691553961950658 7 -0.0611419677734375 1 Oxidation (M) _MPLERM(Oxidation (M))KGIS_ ENSG00000174292|ENST00000688331|TNK1;nc|ENSG00000174292|Q13470|TNK1 19.361941925380144 0.5226674314761524 3 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L} 9 -1 + 85.721 0.0 0.0 7.2855 7.2855 91.547 0.0 0.0 0.0 30.38130230200038 10.590992953673537 10.590992953673537 9.208187539523747 0 1.5189301784845295 1.6989700043360187 0.0 0.0 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L};MP{I|L}E{M(Oxidation (M))|F}GGWK{I|L};[{I|L}P]E{M(Oxidation (M))|F}NM[{I|L}A]{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]E{M(Oxidation (M))|F}GGM[{I|L}A]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}NM[{I|L}A]{[QD]|[EN]|[WG]|[KD]|[RS]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}M[{I|L}A]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}GGM[{I|L}A]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E[{I|L}P]M[{I|L}A]{[QD]|[EN]|[WG]|[KD]|[RS]} 7.2855;6.5029;3.6398;2.436;1.8338;1.1394;1.0549;0.56336 -;-;-;-;-;-;-;- 506 + 1 2.304 41339.1 1.0 15388 6299 21688 HBL1_DMSO_200M_050219_1,21689 HBL1_DMSO_200M_050219_1,21689,MPLERMKGIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21690 107.78 800.0 188420.0 25 0 17705.0 + 3355 AYPEYLITF 9 100 1116.5614069153137 1115.5541304487135 1 1116.559741199017 MULTI CID FTMS 0 0 0 21688 115831.515625 0.1755049223274363 53 -0.6139907836914062 2 Unmodified _AYPEYLITF_ ENSG00000173193|ENST00000474629|PARP14;ENSG00000173200|ENST00000464300|PARP15;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;nc|ENSG00000173200|Q460N3-2|PARP15 81.61307344734483 0.0171259190214613 3 [EP]YAY{I|L}{I|L}T{M(Oxidation (M))|F} 9 4 + 85.048 0.0 0.0 7.6238 7.6238 82.689 0.0 0.0 0.0 19.999999999999982 16.47817481888636 16.47817481888636 1.373657690592438 0 0.6203715150305281 1.3979400086720375 1.5021934810768762 0.0 [EP]YAY{I|L}{I|L}T{M(Oxidation (M))|F};[EP]YA{I|L}Y{I|L}T{M(Oxidation (M))|F};[EP]Y{I|L}AY{I|L}T{M(Oxidation (M))|F};[EP]Y{I|L}{I|L}AYT{M(Oxidation (M))|F};[EP]YA{I|L}{I|L}YT{M(Oxidation (M))|F};[EP]{M(Oxidation (M))|F}SY{I|L}{I|L}T{M(Oxidation (M))|F};[EP]Y{I|L}A{I|L}YT{M(Oxidation (M))|F};[EP]YYA{I|L}{I|L}T{M(Oxidation (M))|F};[EP]{M(Oxidation (M))|F}S{I|L}Y{I|L}T{M(Oxidation (M))|F};[EP]{I|L}YAY{I|L}T{M(Oxidation (M))|F} 7.6238;7.5007;7.4548;7.095;6.972;6.9263;6.9261;6.8803;6.8032;6.7572 -;-;-;-;-;-;-;-;-;- 4766 1 2.304 99738.7 0.4099999964237213 15389 6299 21688 HBL1_DMSO_200M_050219_1,21690 HBL1_DMSO_200M_050219_1,21690,AYPEYLITF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21695 107.8 462.0 113930.0 25 0 14716.0 + 1297 AITDLISEL 9 75 974.5411162998304 973.5338398332304 1 974.5408813357352 MULTI CID FTMS 0 0 0 21694 35508.76953125 0.1998148695888118 -6 0.0426483154296875 1 Unmodified _AITDLISEL_ ENSG00000005075|ENST00000292614|POLR2J;ENSG00000228049|ENST00000333432|POLR2J2;ENST00000326391.6_1_7:44054045-44058742:-|nuORF;ENST00000427076.5_1_7:44053248-44058742:-|nuORF;nc|ENSG00000285437|Q9H1A7|POLR2J3 64.23631603340823 0.0237365939569086 3 {[QN]|[E{I|L}]|[KN]}SA{I|L}{I|L}C{I|L}{I|L} 9 5 + 77.273 0.0 0.0 7.9374 7.9374 88.308 0.0 0.0 0.0 6.020599913279625 14.973024840566469 6.020599913279625 4.757724967479859 0 0.0 0.0 2.5669015600442577 0.0 {[QN]|[E{I|L}]|[KN]}SA{I|L}{I|L}C{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}SA{I|L}{I|L}SE{I|L};{NN|[MP]|[D{I|L}]|[EV]}TA{I|L}{I|L}C{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}SA{I|L}SE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}S{I|L}A{I|L}C{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}A{I|L}{I|L}SE{I|L};{NN|[MP]|[D{I|L}]|[EV]}TA{I|L}{I|L}SE{I|L};{[QN]|[E{I|L}]|[KN]}GT{I|L}{I|L}C{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}SA{I|L}S{I|L}E{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}A{I|L}SE{I|L}{I|L} 7.9374;7.4487;7.3189;7.0608;7.011;6.9586;6.8302;6.6782;6.5721;6.5707 -;-;-;-;-;-;-;-;-;- 1860 1 2.304 44116.5 1.0 15390 6303 21694 HBL1_DMSO_200M_050219_1,21695 HBL1_DMSO_200M_050219_1,21695,AITDLISEL True True AITDLISEL 107.80204 974.540881335735 601653.5 21694.0 ENSG00000228049|ENST00000333432|POLR2J2;;ENST00000427076.5_1_7:44053248-44058742:-|nuORF;;nc|ENSG00000285437|Q9H1A7|POLR2J3;;ENSG00000005075|ENST00000292614|POLR2J;;ENST00000326391.6_1_7:44054045-44058742:-|nuORF 3.223527431488037 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21698 107.82 516.0 169820.0 25 0 18831.0 + 26657 NYIDRFLSSM 10 89 623.3001799813549 1244.5858070295096 2 623.3006469607353 MULTI CID FTMS 0 0 0 21697 99033.734375 0.0648157923714892 -26 0.1859893798828125 1 Unmodified _NYIDRFLSSM_ ENSG00000145386|ENST00000274026|CCNA2 97.74103586103692 0.0087788759135915 3 [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM 10 0 + 89.707 0.0 0.0 7.2077 7.2077 95.228 0.0 0.0 0.0 23.40620618687793 70.48606762693608 23.40620618687793 38.93575203269589 0 2.742992819099939 2.0 0.7887254899964358 0.6307196863200843 + + [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM;{[CT]|[{M(Oxidation (M))|F}G]}[VS]DR{M(Oxidation (M))|F}{I|L}SSM 7.2077;4.0793 +;- + 239 1 2.304 69743.5 1.0 15391 6305 21697 HBL1_DMSO_200M_050219_1,21698 HBL1_DMSO_200M_050219_1,21698,NYIDRFLSSM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21701 107.84 800.0 32253.0 25 0 1005.3 -1 0 71 1169.9686250477755 0 1170.098681628704 PEAK CID FTMS 0 0 0 -1 0 1 3 E 1 -1 2.4743 0.0 0.0 0.10583 0.0 0.0 1443.9644584922323 761.8730562799436 2205.837514772176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.10583 - 4 + 1 2.304 24672.4 0.4300000071525574 15392 6307 21700 HBL1_DMSO_200M_050219_1,21701 HBL1_DMSO_200M_050219_1,21701, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21702 107.85 800.0 32391.0 25 0 2598.5 -1 0 69 906.9288207888604 0 906.9288207888604 PEAK CID FTMS 0 0 0 -1 0 2 3 {I|L} 1 -1 5.4846 0.0 0.0 0.30271 0.0 0.0 1211.5110706775267 484.2212008111938 1695.7322714887205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.30271 - 9 + 1 2.304 23403.3 0.4300000071525574 15393 6307 21700 HBL1_DMSO_200M_050219_1,21702 HBL1_DMSO_200M_050219_1,21702, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21706 107.88 800.0 126140.0 25 0 6681.1 -1 0 99 802.1333459019248 3204.504277741299 4 802.6353637576103 MULTI CID FTMS 0 0 0 21705 67588.8203125 0.635837027464107 -7 0.06878662109375 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 71.833 0.0 0.0 2.2416 0.0 0.0 0.0 2163.892703810647 2163.892703810647 53.64516253185087 0.0 0.0 0.0 0 1.5 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.2416 - 258 1 2.304 76378.9 0.3899999856948852 15394 6310 21705 HBL1_DMSO_200M_050219_1,21706 HBL1_DMSO_200M_050219_1,21706, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21708 107.88 122.0 1991600.0 25 0 133470.0 -1 0 148 827.3953017656797 3305.5521011963187 4 827.6467162966728 MULTI CID FTMS 0 0 0 21707 933694.5 0.5956232722808441 2 -0.0270004272460937 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 65.771 0.0 0.0 1.9897 0.0 0.0 0.0 2264.936868708895 2264.936868708895 14.554384198460385 0.0 0.0 0.0 0 1.924742501084005 0.0 0.8441876774005248 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9897 - 3777 1 2.304 182087.6 1.0 15395 6311 21707 HBL1_DMSO_200M_050219_1,21708 HBL1_DMSO_200M_050219_1,21708, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21709 107.9 800.0 15051.0 25 0 816.82 -1 0 35 1114.540942239168 0 1114.449145495892 PEAK CID FTMS 0 0 0 -1 0 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.304 19029.0 0.3300000131130218 15396 6311 21707 HBL1_DMSO_200M_050219_1,21709 HBL1_DMSO_200M_050219_1,21709, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21711 107.9 317.0 1033900.0 25 0 66463.0 -1 0 132 1102.8576186457892 3305.551026537568 3 1103.192553699017 MULTI CID FTMS 0 0 0 21710 755725.125 0.6214251332289504 44 -0.5091781616210938 1 3 H{I|L}VEA{I|L}Y{I|L}[KC]M 11 -1 101.26 0.0 0.0 3.0634 0.0 0.0 0.0 2001.8665255182248 2001.8665255182248 44.145845000778536 0.0 0.0 0.0 0 1.924742501084005 0.0 0.0 2.4291746928241125 H{I|L}VEA{I|L}Y{I|L}[KC]M 3.0634 - 4675 + 1 2.304 216886.2 1.0 15397 6312 21710 HBL1_DMSO_200M_050219_1,21711 HBL1_DMSO_200M_050219_1,21711, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21714 107.92 800.0 134550.0 25 0 10961.0 + 31055 RLIESLFTI 9 95 546.3265920125438 1090.6386310918874 2 546.3267700076103 MULTI CID FTMS 0 0 0 21713 66520.9453125 0.3260700783976128 -19 0.1721267700195312 1 Unmodified _RLIESLFTI_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 36.506200033944 0.094635877243972 3 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L} 9 2 + 65.296 0.0 0.0 5.9869 5.9869 83.537 0.0 0.0 0.0 5.051499783199063 16.478174818886373 5.051499783199063 5.051499783199063 0 0.8807196863200843 1.3979400086720375 0.7614393726401688 0.0 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L};[{I|L}V][W{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L};[{I|L}T]AA{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}T{I|L};[{I|L}T]{M(Oxidation (M))|F}[PS][KG]KT{I|L};[{I|L}V][SG]{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}T{I|L};[{M(Oxidation (M))|F}T]{I|L}[PS][KG]KT{I|L};{[TV]|[{I|L}S]}[VG]{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}T{I|L};{[SA]|[TG]}VV{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}T{I|L} 5.9869;5.5237;5.0232;4.9724;3.966;3.6571;3.2453;2.7374 -;-;-;-;-;-;-;- 301 1 2.304 86313.5 0.6399999856948853 15398 6314 21713 HBL1_DMSO_200M_050219_1,21714 HBL1_DMSO_200M_050219_1,21714,RLIESLFTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21717 107.93 111.0 476710.0 25 0 38804.0 + 18307 KVLDIMPLTL 10 82 571.8465962597112 1141.6786395862223 2 571.8464843630791 MULTI CID FTMS 0 0 0 21716 418307.8125 0.2801420859078539 28 -0.3812408447265625 1 Unmodified _KVLDIMPLTL_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 90.13494162714682 0.0093239051209448 3 [{I|L}T]{I|L}Q{I|L}MP{I|L}T{I|L} 10 3 + 87.107 0.0 0.0 7.6297 7.6297 88.712 0.0 0.0 0.0 5.688564697436348 15.026975159433531 5.688564697436348 5.688564697436348 0 1.305462187404089 1.3010299956639813 1.113982988912431 0.3807196863200844 [{I|L}T]{I|L}Q{I|L}MP{I|L}T{I|L};[{I|L}P]T{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}T]P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}T]{I|L}QM{I|L}P{I|L}T{I|L};[{I|L}P]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P{I|L}T{I|L};[{I|L}T]P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P{I|L}T{I|L};[{I|L}T]{I|L}[AG]{I|L}MP{I|L}T{I|L};[{I|L}T]{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}T]{I|L}[AG]M{I|L}P{I|L}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}MP{I|L}T{I|L} 7.6297;7.1315;7.0914;7.0699;6.9051;6.865;6.4935;6.192;5.6488;5.4001 -;-;-;-;-;-;-;-;-;+ + 1019 1 2.304 48231.2 1.0 15399 6316 21716 HBL1_DMSO_200M_050219_1,21717 HBL1_DMSO_200M_050219_1,21717,KVLDIMPLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21718 107.94 363.0 245180.0 25 0 16439.0 + 10609 FVLPELPSV 9 98 500.78893037368704 999.563307814174 2 500.7881652712822 MULTI CID FTMS 0 0 0 21716 91649.7890625 0.1643180867745822 26 -0.3407440185546875 2 Unmodified _FVLPELPSV_ ENSG00000182149|ENST00000378799|IST1;ENST00000536027.1_1_16:71958181-71961713:+|nuORF;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 50.855029805455786 0.0384952370514206 3 {[TV]|[{I|L}S]}T{I|L} 4 7 37.128 0.0 0.0 3.7144 0.0 0.0 0.0 582.2928664902084 582.2928664902084 8.007334020894994 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.6549471895720984 0.0 {[TV]|[{I|L}S]}T{I|L} 3.7144 - 728 1 2.304 72066.8 1.0 15400 6316 21716 HBL1_DMSO_200M_050219_1,21718 HBL1_DMSO_200M_050219_1,21718,FVLPELPSV True True FVLPELPSV 107.93954 500.788165271282 3785148.0 21716.0 ENSG00000182149|ENST00000378799|IST1;;nc|ENSG00000182149|P53990|IST1;;nc|ENSG00000182149|P53990-6|IST1;;nc|ENSG00000182149|P53990-5|IST1;;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;;ENST00000536027.1_1_16:71958181-71961713:+|nuORF;;nc|ENSG00000182149|P53990-2|IST1 6.609632968902588 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21721 107.96 800.0 32096.0 25 0 2244.7 -1 0 59 1192.879077136517 0 1192.879077136517 PEAK CID FTMS 0 0 0 -1 0 1 3 {M(Oxidation (M))|F} 1 -1 6.8667 0.0 0.0 0.28806 0.0 0.0 994.6230701892468 1239.0711153619752 2233.694185551222 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.28806 - 4 + 1 2.304 22880.9 0.5899999737739563 15401 6318 21720 HBL1_DMSO_200M_050219_1,21721 HBL1_DMSO_200M_050219_1,21721, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21727 107.99 800.0 179240.0 25 0 13573.0 + 18972 LDEVTVAVL 9 104 958.5455688547132 957.5382923881132 1 958.5432006716728 MULTI CID FTMS 0 0 0 21726 43526.67578125 0.1978457019186018 -13 0.1151046752929687 1 Unmodified _LDEVTVAVL_ REV__ENSG00000184677|ENST00000375647|ZBTB40 64.23631603340823 0.0237365939569086 3 {NN|[MP]|[D{I|L}]|[EV]}{I|L}SD{I|L}A{I|L}V 9 -1 + 84.862 0.0 0.0 8.8625 8.8625 88.524 0.0 0.0 0.0 12.21848749616356 8.349870154235873 8.349870154235873 3.7628749457997657 0 0.25 1.5228787452803376 2.1549471895720984 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}SD{I|L}A{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}SD{I|L}{I|L}AV;{NN|[MP]|[D{I|L}]|[EV]}DS{I|L}{I|L}A{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}SD{I|L}AV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}SEVA{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}SVA{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}EVS{I|L}A{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}DS{I|L}{I|L}{I|L}AV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}SDA{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}VSA{I|L}V 8.8625;8.4695;8.1744;7.9905;7.8834;7.8374;7.8135;7.7814;7.7235;7.6656 -;-;-;-;-;-;-;-;-;- 4639 1 2.304 97599.2 0.3300000131130218 15402 6323 21726 HBL1_DMSO_200M_050219_1,21727 HBL1_DMSO_200M_050219_1,21727,LDEVTVAVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21731 108.01 614.0 297530.0 25 0 39170.0 -1 VDINIMLLVV 10 112 1144.6608498317923 1143.6535733651924 1 1145.659716784954 MULTI CID FTMS 0 0 0 21730 96913.265625 0.4760779695094211 30 -0.405059814453125 1 Oxidation (M) _VDINIM(Oxidation (M))LLVV_ ENSG00000181273|ENST00000326855|OR5AK2 17.11289562659939 0.5604042439455784 3 [EP]GG{I|L}{M(Oxidation (M))|F}TVKV 10 -1 49.32 0.0 0.0 4.3125 0.0 0.0 0.0 113.04898919806752 113.04898919806752 23.267039640068937 0.0 0.0 0.0 0 0.0 0.0 2.113982988912431 0.0 [EP]GG{I|L}{M(Oxidation (M))|F}TVKV 4.3125 - 5825 1 2.304 114154.8 1.0 15403 6326 21730 HBL1_DMSO_200M_050219_1,21731 HBL1_DMSO_200M_050219_1,21731,VDINIMLLVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21732 108.03 800.0 210610.0 25 0 24094.0 + 14108 IATEIILEI 9 102 1014.6085233024188 1013.6012468358188 1 1014.607592761517 MULTI CID FTMS 0 0 0 21730 125232.890625 0.1981064457458243 -6 0.0362930297851562 2 Unmodified _IATEIILEI_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 112.59319219568356 0.0043923200227745 3 {[QN]|[E{I|L}]|[KN]}TA{I|L}{I|L}E{I|L}{I|L} 9 4 + 99.186 0.0 0.0 9.7855 9.7855 86.727 0.0 0.0 0.0 15.574835023692088 16.478174818886373 15.574835023692088 2.2852134282335186 0 0.6913706791218284 1.154901959985743 2.309894379144197 0.0 {[QN]|[E{I|L}]|[KN]}TA{I|L}{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}TA{I|L}{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}T{I|L}A{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}TA{I|L}E{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}T{I|L}A{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}TA{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}TA{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}T{I|L}AE{I|L}{I|L}{I|L};{I|L}{I|L}ETA{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}T{I|L}{I|L}AE{I|L}{I|L} 9.7855;9.5601;9.0739;8.97;8.8484;8.6031;8.3777;8.2584;8.2489;8.1258 -;-;-;-;-;-;-;-;-;- 5919 1 2.304 109795.8 0.4900000095367431 15404 6326 21730 HBL1_DMSO_200M_050219_1,21732 HBL1_DMSO_200M_050219_1,21732,IATEIILEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21734 108.04 327.0 220490.0 25 0 24366.0 -1 MPLERMKGIS 10 96 589.3073321877171 1176.600111442234 2 589.3073608279228 MULTI CID FTMS 0 0 0 21733 162188.109375 0.5348116233604839 9 -0.1132354736328125 1 Oxidation (M) _MPLERM(Oxidation (M))KGIS_ ENSG00000174292|ENST00000688331|TNK1;nc|ENSG00000174292|Q13470|TNK1 24.99096001346401 0.4071966087057876 3 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L} 9 -1 + 101.0 0.0 0.0 8.5842 8.5842 93.954 0.0 0.0 0.0 13.188112401572797 10.74753464049519 10.74753464049519 9.208187539523747 0 1.8882104921644447 1.6989700043360187 0.3494850021680094 0.2742275032520141 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L};MP{I|L}E{M(Oxidation (M))|F}GGWK{I|L};M{I|L}PE{M(Oxidation (M))|F}NWK{I|L};M{I|L}PE{M(Oxidation (M))|F}GGWK{I|L};[{I|L}P]ME{M(Oxidation (M))|F}N{[SA]|[TG]}[R{I|L}];[{I|L}P]EM{M(Oxidation (M))|F}N{[SA]|[TG]}[R{I|L}];[{I|L}P]E{M(Oxidation (M))|F}NM{[SA]|[TG]}[R{I|L}];[{I|L}P]ME{M(Oxidation (M))|F}GG{[SA]|[TG]}[R{I|L}];[{I|L}P]E{M(Oxidation (M))|F}N{[SA]|[TG]}M[R{I|L}];[{I|L}P]EM{M(Oxidation (M))|F}GG{[SA]|[TG]}[R{I|L}] 8.5842;7.8016;6.9316;6.149;3.5213;3.3522;2.8827;2.7424;2.6279;2.5733 -;-;-;-;-;-;-;-;-;- 1448 + 1 2.304 59963.0 1.0 15405 6327 21733 HBL1_DMSO_200M_050219_1,21734 HBL1_DMSO_200M_050219_1,21734,MPLERMKGIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21738 108.06 800.0 211630.0 25 0 7920.4 + 11624 GLAGFFASV 9 134 868.45652146276 867.4492449961599 1 868.4570190310478 MULTI CID FTMS 0 0 0 21737 129693.8828125 0.9070689651027308 6 -0.0954132080078125 1 Unmodified _GLAGFFASV_ ENSG00000112759|ENST00000371755|SLC29A1;nc|ENSG00000112759|Q99808-2|SLC29A1 81.86404211737425 0.017065112157077 3 RG{M(Oxidation (M))|F}ADV 6 5 55.394 0.0 0.0 6.3858 0.0 0.0 204.1114063947281 0.0 204.1114063947281 0.0 20.85007425345765 0.0 0.0 0 0.4247425010840047 0.0 0.5 1.5 RG{M(Oxidation (M))|F}ADV 6.3858 - 6171 1 2.304 112856.0 0.5199999809265137 15406 6330 21737 HBL1_DMSO_200M_050219_1,21738 HBL1_DMSO_200M_050219_1,21738,GLAGFFASV True True GLAGFFASV 108.06096 868.457019031048 1100674.625 21737.0 nc|ENSG00000112759|Q99808-2|SLC29A1;;ENSG00000112759|ENST00000371755|SLC29A1 7.026465733846028 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21739 108.07 800.0 124670.0 25 0 22166.0 + 3921 DALHNLFYI 9 84 553.2877467482474 1104.5609405632947 2 553.2875854372978 MULTI CID FTMS 0 0 0 21737 89007.734375 0.7106174561931055 -1 0.0038223266601562 2 Unmodified _DALHNLFYI_ ENSG00000122512|ENST00000265849|PMS2;nc|ENSG00000122512|P54278-3|PMS2 52.268347100219714 0.0353964759249114 3 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}N{[MS]|[{M(Oxidation (M))|F}A]}S{I|L} 9 6 + 53.936 0.0 0.0 4.883 4.883 82.462 0.0 0.0 0.0 7.147642715192504 8.226825097560422 7.147642715192504 8.226825097560422 0 0.5 0.0 0.6549471895720984 1.0044321917401078 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}N{[MS]|[{M(Oxidation (M))|F}A]}S{I|L};[HN]{I|L}{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}Y{I|L};{[DA]|[EG]}[H{I|L}]N{I|L}{M(Oxidation (M))|F}Y{I|L};[HN]{I|L}[{I|L}A]D{M(Oxidation (M))|F}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}GG{[MS]|[{M(Oxidation (M))|F}A]}S{I|L};{[DA]|[EG]}[H{I|L}]GG{I|L}{M(Oxidation (M))|F}Y{I|L};[Y{M(Oxidation (M))|F}][{I|L}V][C(Carbamidomethyl (C))K]Y{I|L} 4.883;4.1382;3.7525;3.1854;3.14;2.0095;0.10712 -;-;+;-;-;-;- + 264 + 1 2.304 77650.1 0.3899999856948852 15407 6330 21737 HBL1_DMSO_200M_050219_1,21739 HBL1_DMSO_200M_050219_1,21739,DALHNLFYI True True DALHNLFYI 108.07479 553.287585437298 992719.375 21737.0 nc|ENSG00000122512|P54278-3|PMS2;;ENSG00000122512|ENST00000265849|PMS2 2.0414045012245574 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21741 108.08 39.0 1867500.0 25 0 219470.0 + 26658 NYIDRFLSSM 10 83 623.3001799813549 1244.5858070295096 2 623.3005248904228 MULTI CID FTMS 0 0 0 21740 1527926.0 1.0 0 0.0 1 Unmodified _NYIDRFLSSM_ ENSG00000145386|ENST00000274026|CCNA2 97.74103586103692 0.0087788759135915 3 [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM 10 0 + 88.14 0.0 0.0 7.0819 7.0819 94.594 0.0 0.0 0.0 18.40620618687793 68.74220950028501 18.40620618687793 31.70818753952375 0 2.242992819099939 2.0 0.8252574989159953 0.7614393726401688 + + [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM;{[HG]|PP}E{I|L}{M(Oxidation (M))|F}RD{I|L}QM;{[HG]|PP}E{I|L}{M(Oxidation (M))|F}RD{I|L}[AG]M;{[HG]|PP}E{I|L}{M(Oxidation (M))|F}RD{I|L}MQ 7.0819;4.5342;3.7978;3.4616 +;-;-;- + 278 1 2.304 57988.4 1.0 15408 6331 21740 HBL1_DMSO_200M_050219_1,21741 HBL1_DMSO_200M_050219_1,21741,NYIDRFLSSM True True NYIDRFLSSM 108.07911 623.300524890423 43636900.0 21740.0 ENSG00000145386|ENST00000274026|CCNA2 10.278580983479818 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21742 108.08 300.0 114830.0 25 0 10152.0 + -1 FPVILYEV 8 46 979.8223021982884 0 979.8220092654228 PEAK CID FTMS 0 0 0 21740 108627.9140625 1.0 0 0.0 2 ENST00000454201.5_1_3:50363554-50364527:-|nuORF;ENSG00000114383|ENST00000232496|TUSC2;ENST00000421918.1_1_3:50363554-50364574:-|nuORF 3 EY{I|L}{M(Oxidation (M))|F}{I|L} 5 -1 27.959 0.0 0.0 1.4282 0.0 0.0 1096.1651645987397 193.09847437076408 1289.2636389695035 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EY{I|L}{M(Oxidation (M))|F}{I|L} 1.4282 - 146 + 1 2.304 32421.7 1.0 15409 6331 21740 HBL1_DMSO_200M_050219_1,21742 HBL1_DMSO_200M_050219_1,21742, False False FPVILYEV 108.08499 979.822009265423 871302.0625 21740.0 ENST00000454201.5_1_3:50363554-50364527:-|nuORF;;ENSG00000114383|ENST00000232496|TUSC2;;ENST00000421918.1_1_3:50363554-50364574:-|nuORF 4.421388705571492 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21743 108.1 719.0 80235.0 25 0 10048.0 + 38920 TVLQELINV 9 83 514.8029361067062 1027.5913192802122 2 514.8029052615166 MULTI CID FTMS 0 0 0 21740 79529.0078125 0.1157425413994772 -16 0.15020751953125 3 Unmodified _TVLQELINV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 85.27202061508552 0.0162393975915471 3 {[TV]|[{I|L}S]}{I|L}QE{I|L} 6 3 54.906 0.0 0.0 5.3431 0.0 0.0 0.0 341.1809548605435 341.1809548605435 35.31840835879775 0.0 0.0 0.0 0 0.25 2.0 1.3996498648046138 0.805462187404089 + {[TV]|[{I|L}S]}{I|L}QE{I|L} 5.3431 + + 597 1 2.304 49349.3 1.0 15410 6331 21740 HBL1_DMSO_200M_050219_1,21743 HBL1_DMSO_200M_050219_1,21743,TVLQELINV True True TVLQELINV 108.09746 514.802905261517 10251292.0 21740.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 4.736049811045329 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21746 108.12 800.0 14661.0 25 0 2011.7 -1 0 31 1127.641406238079 0 1127.641406238079 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.304 20650.8 0.5699999928474426 15411 6333 21745 HBL1_DMSO_200M_050219_1,21746 HBL1_DMSO_200M_050219_1,21746, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21748 108.13 800.0 144850.0 25 0 6913.1 -1 0 120 802.1336772808997 3204.505603257199 4 802.3848144412041 MULTI CID FTMS 0 0 0 21747 48652.40234375 0.4219449242441233 -4 0.0733108520507812 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 67.607 0.0 0.0 2.1098 0.0 0.0 0.0 2163.8942500679987 2163.8942500679987 51.46332269400685 0.0 0.0 0.0 0 1.5 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.1098 - 312 1 2.304 82376.4 0.8899999856948853 15412 6334 21747 HBL1_DMSO_200M_050219_1,21748 HBL1_DMSO_200M_050219_1,21748, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21750 108.14 186.0 907180.0 25 0 57529.0 -1 0 125 827.3953017656797 3305.5521011963187 4 827.8971435427666 MULTI CID FTMS 0 0 0 21749 435528.53125 0.2713097132325836 26 -0.3028411865234375 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 55.072 0.0 0.0 1.666 0.0 0.0 0.0 2264.934234166061 2264.934234166061 25.08686716251073 0.0 0.0 0.0 0 1.424742501084005 0.0 0.2742275032520141 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.666 - 2122 1 2.304 129507.5 1.0 15413 6335 21749 HBL1_DMSO_200M_050219_1,21750 HBL1_DMSO_200M_050219_1,21750, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21753 108.16 800.0 28791.0 25 0 2711.4 -1 0 56 1169.585009753704 0 1169.585009753704 PEAK CID FTMS 0 0 0 -1 0 1 3 {I|L}D 2 -1 6.498 0.0 0.0 0.27803 0.0 0.0 1447.7157825915897 658.3058565729124 2106.0216391645017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {I|L}D 0.27803 - 20 + 1 2.304 21761.5 0.6899999976158142 15414 6337 21752 HBL1_DMSO_200M_050219_1,21753 HBL1_DMSO_200M_050219_1,21753, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21755 108.17 271.0 376950.0 25 0 28003.0 -1 0 69 1102.8576186457892 3305.551026537568 3 1103.525439441204 MULTI CID FTMS 0 0 0 21754 466868.28125 0.3726828472221806 67 -0.739715576171875 1 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 43.365 0.0 0.0 1.3119 0.0 0.0 0.0 2364.00646603244 2364.00646603244 19.55259398656281 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.3119 - 136 1 2.304 73620.5 1.0 15415 6338 21754 HBL1_DMSO_200M_050219_1,21755 HBL1_DMSO_200M_050219_1,21755, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21756 108.18 402.0 33071.0 25 0 1662.3 -1 0 41 946.851123034954 0 946.851123034954 PEAK CID FTMS 0 0 0 -1 0 2 3 {M(Oxidation (M))|F} 1 -1 7.4913 0.0 0.0 0.39601 0.0 0.0 730.7767567126831 1010.8232515924436 1741.6000083051267 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.39601 - 1 + 1 2.304 17256.7 1.0 15416 6338 21754 HBL1_DMSO_200M_050219_1,21756 HBL1_DMSO_200M_050219_1,21756, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21757 108.19 800.0 33732.0 25 0 2892.3 + 14343 IESAITDIL 9 50 974.5418136948764 973.5345372282763 1 974.4817993044852 MULTI CID FTMS 0 0 0 -1 0 3 Unmodified _IESAITDIL_ REV__ENSG00000132669|ENST00000255006|RIN2;REV__ENST00000467569.5_1_20:19870056-19916128:+|nuORF;REV__nc|ENSG00000132669|Q8WYP3-2|RIN2 21.74664581756881 0.2544899275067181 3 MTV{I|L}Y 5 -1 23.443 0.0 0.0 2.4081 0.0 0.0 0.0 363.2063387506469 363.2063387506469 7.245462655597091 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MTV{I|L}Y 2.4081 - 50 + 1 2.304 26017.5 0.800000011920929 15417 6338 21754 HBL1_DMSO_200M_050219_1,21757 HBL1_DMSO_200M_050219_1,21757,IESAITDIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21758 108.2 800.0 12433.0 25 0 778.99 -1 0 28 1188.6833243385445 0 1188.578295886517 PEAK CID FTMS 0 0 0 21754 26838.55078125 1.0 0 0.0 4 3 W 1 -1 5.4846 0.0 0.0 0.23089 0.0 0.0 1410.9146090268953 775.3412569635374 2186.2558659904325 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.23089 - 1 + 1 2.304 14209.9 0.4300000071525574 15418 6338 21754 HBL1_DMSO_200M_050219_1,21758 HBL1_DMSO_200M_050219_1,21758, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21760 108.22 719.0 150180.0 25 0 12932.0 + 31056 RLIESLFTI 9 80 546.3265920125438 1090.6386310918874 2 546.3272582888603 MULTI CID FTMS 0 0 0 21759 109976.7265625 0.5390801300806034 6 -0.1103973388671875 1 Unmodified _RLIESLFTI_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 66.45667989310934 0.0225072657982126 3 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L} 9 2 + 76.022 0.0 0.0 6.9704 6.9704 79.745 0.0 0.0 0.0 0.6137816695353706 16.478174818886373 0.6137816695353706 0.6137816695353706 0 1.305462187404089 1.3979400086720375 1.2302046884880935 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L};[{I|L}T][R{I|L}]D{I|L}{M(Oxidation (M))|F}T{I|L};[{I|L}V][W{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]D{I|L}{M(Oxidation (M))|F}T{I|L};[{I|L}T][R{I|L}]S{I|L}{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]S{I|L}{M(Oxidation (M))|F}E{I|L} 6.9704;6.9141;6.2541;6.1955;3.9254;3.2068 -;-;-;-;-;- 236 1 2.304 89404.7 1.0 15419 6339 21759 HBL1_DMSO_200M_050219_1,21760 HBL1_DMSO_200M_050219_1,21760,RLIESLFTI True True RLIESLFTI 108.21937 546.32725828886 3684050.75 21759.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 5.444239457448323 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21761 108.23 800.0 199500.0 25 0 49151.0 + 25582 NFFPSGIDF 9 105 1043.4829684304457 1042.4756919638455 1 1043.485766589642 MULTI CID FTMS 0 0 0 21759 131010.265625 0.7715737297154539 -12 0.1762619018554687 2 Unmodified _NFFPSGIDF_ ENSG00000198492|ENST00000373812|YTHDF2;nc|ENSG00000198492|Q9Y5A9-2|YTHDF2 99.7552728972412 0.0110101799492648 3 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}PSG{I|L}D{M(Oxidation (M))|F} 9 0 + 68.084 0.0 0.0 6.531 6.531 91.383 0.0 0.0 0.0 13.602934034162992 16.478174818886366 13.602934034162992 13.602934034162992 0 1.783674643474364 0.0 1.1808845489566888 1.035666875892183 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}PSG{I|L}D{M(Oxidation (M))|F};[PS]G{I|L}N{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[Y{I|L}]PQD{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}P[Y{I|L}]QD{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}P{M(Oxidation (M))|F}SG{I|L}D{M(Oxidation (M))|F};[PS]G{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]QD{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}PWW{M(Oxidation (M))|F};[PS]G{M(Oxidation (M))|F}{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F};{[VA]|[{I|L}G]}SPN{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[Y{I|L}]P[AG]D{M(Oxidation (M))|F} 6.531;5.2262;5.1232;4.9218;4.9165;4.5393;4.4631;4.4622;4.3556;4.2347 +;-;-;-;-;-;-;-;-;- + 2279 1 2.304 105698.1 0.8799999952316284 15420 6339 21759 HBL1_DMSO_200M_050219_1,21761 HBL1_DMSO_200M_050219_1,21761,NFFPSGIDF True True NFFPSGIDF 108.23323 1043.48576658964 1863856.125 21759.0 nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;;ENSG00000198492|ENST00000373812|YTHDF2 7.643980344136556 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21762 108.25 800.0 116680.0 25 0 13951.0 + 3211 AWIDGVLDM 9 77 1019.4862161805404 1018.4789397139403 1 1019.486865222454 MULTI CID FTMS 0 0 0 21759 104561.078125 0.151001029492626 30 -0.2845916748046875 3 Unmodified _AWIDGVLDM_ ENSG00000165934|ENST00000298875|CPSF2 92.4914307365334 0.0139747738690111 3 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DGV{I|L}DM 9 0 + 87.819 0.0 0.0 8.6226 8.6226 90.836 0.0 0.0 0.0 20.15794267183232 64.78113324272441 20.15794267183232 6.210149894766701 0 1.9991348669726232 1.3010299956639813 1.0994850021680094 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DGV{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DR{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}EAA{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}RD{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RD]{I|L}{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DG]V{I|L}{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VG]D{I|L}{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DG]{I|L}V{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VG]EV{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[VG]D{I|L}DM 8.6226;8.0128;7.3926;7.3322;7.1211;6.9932;6.9932;6.7102;6.7102;6.4227 +;-;-;-;-;-;-;-;-;- + 1860 1 2.304 67634.8 0.4099999964237213 15421 6339 21759 HBL1_DMSO_200M_050219_1,21762 HBL1_DMSO_200M_050219_1,21762,AWIDGVLDM True True AWIDGVLDM 108.2471 1019.48686522245 9943171.0 21759.0 ENSG00000165934|ENST00000298875|CPSF2 8.333468119303385 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21763 108.26 800.0 116580.0 25 0 17914.0 + 1608 ALLQEIVNI 9 111 506.8057455313949 0 506.8056823611259 PEAK CID FTMS 0 0 0 21759 88225.203125 0.504482065884327 -16 0.2278671264648437 4 Unmodified _ALLQEIVNI_ ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9;nc|ENSG00000144580|Q92600-3|CNOT9 74.42276476219924 0.0184863773765765 3 {I|L}A{I|L}Q 4 7 28.549 0.0 0.0 2.8222 0.0 0.0 344.2053420206202 239.10463892154533 583.3099809421656 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.8494850021680094 {I|L}A{I|L}Q 2.8222 - 839 + 1 2.304 73162.3 0.3300000131130218 15422 6339 21759 HBL1_DMSO_200M_050219_1,21763 HBL1_DMSO_200M_050219_1,21763,ALLQEIVNI True True ALLQEIVNI 108.26092 506.805682361126 1289569.75 21759.0 ENSG00000144580|ENST00000273064|CNOT9;;nc|ENSG00000144580|Q92600-2|CNOT9;;nc|ENSG00000144580|Q92600-3|CNOT9 3.2092440128326416 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21767 108.29 800.0 79010.0 25 0 7557.0 + 12747 GVPAEELFTAI 11 85 573.8057280319593 1145.5969031307186 2 573.8063232302666 MULTI CID FTMS 0 0 0 21766 72348.8125 0.1745579957952185 -62 0.6449356079101562 1 Unmodified _GVPAEELFTAI_ chrX:1629939-1633150|29|10.55|0.57|4.21|+|ENST00000381229|ASMT,ASMT;chrX:1629939-1636438|32|10.19|0.46|4.47|+|ENST00000381233|ASMT,ASMT;ENSG00000196433|ENST00000381241|ASMT;nc|ENSG00000292336|P46597-2|ASMT;nc|ENSG00000292336|P46597|ASMT 18.1463463914782 0.6576820063886638 3 [PA]EE{I|L}{M(Oxidation (M))|F}T 7 4 40.391 0.0 0.0 3.5258 0.0 0.0 0.0 355.1994781641749 355.1994781641749 12.242568030831734 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.8494850021680094 0.0 + [PA]EE{I|L}{M(Oxidation (M))|F}T 3.5258 + + 573 1 2.304 53182.9 0.9200000166893004 15423 6342 21766 HBL1_DMSO_200M_050219_1,21767 HBL1_DMSO_200M_050219_1,21767,GVPAEELFTAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21768 108.3 800.0 137750.0 25 0 20973.0 + 30842 RILDIDIPLSV 11 73 627.376646284589 1252.738739635978 2 627.3770629763603 MULTI CID FTMS 0 0 0 21766 83852.828125 0.4088675024915285 -17 0.2733078002929687 2 Unmodified _RILDIDIPLSV_ ENSG00000115112|ENST00000263707|TFCP2L1 53.31671820480216 0.0992620867501809 3 [{I|L}P]SV[{I|L}T]D{I|L}[{I|L}P]S 11 5 63.702 0.0 0.0 5.085 0.0 0.0 0.0 114.06073605615292 114.06073605615292 49.72289807887176 0.0 0.0 0.0 0 1.0 1.5228787452803376 1.524227503252014 0.0 [{I|L}P]SV[{I|L}T]D{I|L}[{I|L}P]S 5.085 - 206 1 2.304 86991.0 0.9399999976158142 15424 6342 21766 HBL1_DMSO_200M_050219_1,21768 HBL1_DMSO_200M_050219_1,21768,RILDIDIPLSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21770 108.31 434.0 129230.0 25 0 10260.0 -1 MPLERMKGIS 10 87 589.3073321877171 1176.600111442234 2 589.3073608279228 MULTI CID FTMS 0 0 0 21769 118879.3515625 0.3920019737463094 25 -0.1721420288085937 1 Oxidation (M) _MPLERM(Oxidation (M))KGIS_ ENSG00000174292|ENST00000688331|TNK1;nc|ENSG00000174292|Q13470|TNK1 24.99096001346401 0.4071966087057876 3 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L} 9 -1 + 86.891 0.0 0.0 7.3849 7.3849 91.84 0.0 0.0 0.0 13.71977829623269 11.478174818886371 11.478174818886371 9.208187539523747 0 1.4489700043360187 1.6989700043360187 0.0 0.3807196863200844 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L};MP{I|L}E{M(Oxidation (M))|F}GGWK{I|L};MP{I|L}[{M(Oxidation (M))|F}V]{I|L}{I|L}D{[ET]|[MV]};[{I|L}P]E{M(Oxidation (M))|F}NM{[SA]|[TG]}[R{I|L}];[{I|L}P]E{M(Oxidation (M))|F}N{[SA]|[TG]}M[R{I|L}];[{I|L}P]ME{M(Oxidation (M))|F}N{[SA]|[TG]}[R{I|L}];[{I|L}P]EM{M(Oxidation (M))|F}N{[SA]|[TG]}[R{I|L}];[{I|L}P]E{M(Oxidation (M))|F}GGM{[SA]|[TG]}[R{I|L}];[YV]KW[{I|L}P]E{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]E{M(Oxidation (M))|F}GG{[SA]|[TG]}M[R{I|L}] 7.3849;6.6023;3.9403;2.8842;2.3048;2.3022;1.9834;1.7817;1.398;1.2023 -;-;-;-;-;-;-;-;-;- 672 + 1 2.304 48885.5 1.0 15425 6343 21769 HBL1_DMSO_200M_050219_1,21770 HBL1_DMSO_200M_050219_1,21770,MPLERMKGIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21773 108.33 800.0 118070.0 25 0 12409.0 44756 YPLHILFV 8 103 501.2945391869157 1000.5745254406314 2 501.2937194705009 MULTI CID FTMS 0 0 0 21772 131739.375 0.5673938512076699 -31 0.405670166015625 1 Unmodified _YPLHILFV_ ENSG00000100280|ENST00000357586|AP1B1;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1 32.45364647766026 0.3613649037604678 3 [H{I|L}]P{I|L}Y{I|L}{M(Oxidation (M))|F}V 8 4 + 42.771 0.0 0.0 4.2746 4.2746 74.997 0.0 0.0 0.0 12.562893943202624 19.70667748014435 12.562893943202624 3.0102999566398125 0 0.718765315847925 0.7958800173440752 0.0 0.0 [H{I|L}]P{I|L}Y{I|L}{M(Oxidation (M))|F}V;[H{I|L}]PY{I|L}{I|L}{M(Oxidation (M))|F}V;[H{I|L}]P{I|L}{I|L}Y{M(Oxidation (M))|F}V;[H{I|L}]{I|L}PY{I|L}{M(Oxidation (M))|F}V;[H{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}V;[H{I|L}]{I|L}P{I|L}Y{M(Oxidation (M))|F}V;[H{I|L}]P{I|L}{I|L}{M(Oxidation (M))|F}YV;[H{I|L}]{I|L}P{I|L}{M(Oxidation (M))|F}YV;{[RE]|[WV]}{I|L}AA[VP]{M(Oxidation (M))|F}V;{I|L}{I|L}HPY{I|L}{M(Oxidation (M))|F}V 4.2746;3.9738;3.9738;3.6729;3.3721;3.3721;3.1732;2.5715;2.1461;2.1246 -;-;-;-;-;-;-;-;-;- 555 1 2.304 76268.9 0.8600000143051147 15426 6345 21772 HBL1_DMSO_200M_050219_1,21773 HBL1_DMSO_200M_050219_1,21773,YPLHILFV False True DGLLVLCRI 108.32977 501.293719470501 1877059.375 21772.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1;;ENST00000570129.1_1_16:27494722-27497377:-|nuORF -0.0904807249704996 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21775 108.34 150.0 371340.0 25 0 43009.0 + 26659 NYIDRFLSSM 10 76 623.3001799813549 1244.5858070295096 2 623.3004638552666 MULTI CID FTMS 0 0 0 21774 373512.6875 0.244457315013947 15 -0.107330322265625 1 Unmodified _NYIDRFLSSM_ ENSG00000145386|ENST00000274026|CCNA2 83.27773906761396 0.014381580010361 3 [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM 10 0 + 83.326 0.0 0.0 6.695 6.695 94.572 0.0 0.0 0.0 23.50711233356286 65.68881289407813 23.50711233356286 83.32563782453214 0 2.742992819099939 2.0 0.3807196863200844 0.3494850021680094 + + [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM 6.695 + + 190 1 2.304 48440.4 1.0 15427 6346 21774 HBL1_DMSO_200M_050219_1,21775 HBL1_DMSO_200M_050219_1,21775,NYIDRFLSSM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21777 108.34 71.0 596830.0 25 0 64275.0 + 38921 TVLQELINV 9 70 514.8029361067062 1027.5913192802122 2 514.8030883669853 MULTI CID FTMS 0 0 0 21776 687119.9375 1.0 0 0.0 1 Unmodified _TVLQELINV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 39.957323273325 0.0756908302845263 3 [Q{I|L}]E{I|L}S{I|L} 6 5 44.085 0.0 0.0 4.2902 0.0 0.0 0.0 341.184125194895 341.184125194895 25.145228064086 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 1.035666875892183 [Q{I|L}]E{I|L}S{I|L} 4.2902 - 191 1 2.304 38704.2 1.0 15428 6347 21776 HBL1_DMSO_200M_050219_1,21777 HBL1_DMSO_200M_050219_1,21777,TVLQELINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21778 108.35 800.0 184480.0 25 0 26185.0 + 15210 IPFGTLVAI 9 85 930.566398607374 929.559122140774 1 930.5660888552666 MULTI CID FTMS 0 0 0 21776 104985.9375 0.5836026849666829 9 -0.0693206787109375 2 Unmodified _IPFGTLVAI_ ENSG00000125304|ENST00000376387|TM9SF2 70.71552829651908 0.0208223590022201 3 [{I|L}P]{M(Oxidation (M))|F}GTV{I|L}A{I|L} 9 2 + 74.677 0.0 0.0 8.0336 8.0336 82.406 0.0 0.0 0.0 0.7010752059608905 16.478174818886373 0.7010752059608905 0.7010752059608905 0 0.0 1.3979400086720375 1.5114393726401687 0.0 [{I|L}P]{M(Oxidation (M))|F}GTV{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GT{I|L}V{I|L}A{I|L};[{I|L}P]{M(Oxidation (M))|F}GT{I|L}VA{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GT{I|L}{I|L}VA{I|L};[{I|L}P]{M(Oxidation (M))|F}GTVA{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GT{I|L}VA{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}GT{I|L}G{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GT{I|L}{I|L}G{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{I|L}TV{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{I|L}T{I|L}VA{I|L} 8.0336;7.9582;7.7694;7.694;7.6501;7.5747;7.3859;7.3105;6.8536;6.5894 -;-;+;-;-;-;-;-;-;- + 1272 1 2.304 99198.6 0.8199999928474426 15429 6347 21776 HBL1_DMSO_200M_050219_1,21778 HBL1_DMSO_200M_050219_1,21778,IPFGTLVAI True True IPFGTLVAI 108.35437 930.566088855267 1667953.125 21776.0 ENSG00000125304|ENST00000376387|TM9SF2 3.616923967997233 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21784 108.39 800.0 214610.0 25 0 17454.0 + 23318 LTALALML 8 92 845.5164499297747 844.5091734631746 1 845.5173828005791 MULTI CID FTMS 0 0 0 21783 125476.578125 0.0871423523347224 35 -0.3231353759765625 1 Unmodified _LTALALML_ ENSG00000141349|ENST00000269097|G6PC3 86.12129899796855 0.0650563179454676 3 [{I|L}T]AA{I|L}{I|L}M{I|L} 8 2 + 79.862 0.0 0.0 9.4566 9.4566 86.143 0.0 0.0 0.0 10.699849938126889 14.904630595263413 10.699849938126889 2.0289375146764854 0 0.3494850021680094 1.6989700043360187 2.555462187404089 0.0 [{I|L}T]AA{I|L}{I|L}M{I|L};[{I|L}T]A{I|L}A{I|L}M{I|L};[{I|L}T]AA{I|L}M{I|L}{I|L};[{I|L}T]A{I|L}AM{I|L}{I|L};[{I|L}A]TA{I|L}{I|L}M{I|L};[{I|L}A]T{I|L}A{I|L}M{I|L};[{I|L}T]A{I|L}{I|L}AM{I|L};[{I|L}T]A{I|L}MA{I|L}{I|L};[{I|L}T]A{I|L}M{I|L}A{I|L};[{I|L}A]TA{I|L}M{I|L}{I|L} 9.4566;9.2163;8.8057;8.5654;8.1896;7.9493;7.8493;7.644;7.5549;7.5387 -;+;-;-;-;-;-;-;-;- + 1347 1 2.304 121130.8 0.8600000143051147 15430 6352 21783 HBL1_DMSO_200M_050219_1,21784 HBL1_DMSO_200M_050219_1,21784,LTALALML True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21787 108.4 392.0 268940.0 25 0 16932.0 -1 0 95 827.3953017656797 3305.5521011963187 4 827.8972656130791 MULTI CID FTMS 0 0 0 21786 156331.484375 0.0973856984140011 45 -0.4492111206054687 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 50.583 0.0 0.0 1.5303 0.0 0.0 0.0 2264.937702516949 2264.937702516949 26.72167511924052 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.5303 - 485 1 2.304 84838.5 1.0 15431 6354 21786 HBL1_DMSO_200M_050219_1,21787 HBL1_DMSO_200M_050219_1,21787, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21792 108.43 800.0 194860.0 25 0 13689.0 -1 0 87 1102.8576186457892 3305.551026537568 3 1103.192919909954 MULTI CID FTMS 0 0 0 21791 174589.1875 0.1435629245521269 90 -1.046966552734375 1 3 H{I|L}VEA{I|L}Y 7 -1 73.972 0.0 0.0 2.2378 0.0 0.0 0.0 2477.080024516294 2477.080024516294 25.951301076249464 0.0 0.0 0.0 0 2.3494850021680094 0.0 0.0 0.0 H{I|L}VEA{I|L}Y 2.2378 - 301 + 1 2.304 113982.8 0.9100000262260436 15432 6358 21791 HBL1_DMSO_200M_050219_1,21792 HBL1_DMSO_200M_050219_1,21792, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21798 108.45 411.0 300440.0 25 0 17093.0 + 14538 IGYPFLVSV 9 82 994.560808035436 993.553531568836 1 994.5610229372978 MULTI CID FTMS 0 0 0 21797 190116.71875 0.8385111423537347 15 -0.147125244140625 1 Unmodified _IGYPFLVSV_ ENSG00000172046|ENST00000417901|USP19;nc|ENSG00000172046|O94966-3|USP19;nc|ENSG00000172046|O94966-4|USP19;nc|ENSG00000172046|O94966-5|USP19;nc|ENSG00000172046|O94966-7|USP19;nc|ENSG00000172046|O94966|USP19 46.92087301778293 0.0471210510596396 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VS{M(Oxidation (M))|F}VSV 9 5 + 68.07 0.0 0.0 6.8512 6.8512 81.328 0.0 0.0 0.0 10.280287236002437 14.973024840566469 10.280287236002437 1.7609125905568137 0 0.0 1.5228787452803376 0.4247425010840047 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VS{M(Oxidation (M))|F}VSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VAYVSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}GY{I|L}VSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V{M(Oxidation (M))|F}SVSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V{I|L}GYSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VGY{I|L}SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VAVYSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}GYV{I|L}SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VG{I|L}YSV;[{I|L}P]{M(Oxidation (M))|F}VS{M(Oxidation (M))|F}VSV 6.8512;6.6739;6.4506;6.409;6.2734;6.1263;5.9704;5.9704;5.903;5.8165 -;-;-;-;-;-;-;-;-;- 3837 1 2.304 86307.1 1.0 15433 6363 21797 HBL1_DMSO_200M_050219_1,21798 HBL1_DMSO_200M_050219_1,21798,IGYPFLVSV True True IGYPFLVSV 108.45499 994.561022937298 2516091.75 21797.0 nc|ENSG00000172046|O94966-7|USP19;;nc|ENSG00000172046|O94966-3|USP19;;nc|ENSG00000172046|O94966-5|USP19;;ENSG00000172046|ENST00000417901|USP19;;nc|ENSG00000172046|O94966-4|USP19;;nc|ENSG00000172046|O94966|USP19 3.0746375719706216 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21804 108.49 800.0 133650.0 25 0 13381.0 + 41486 VPLVAGLVI 9 85 880.586803252005 879.5795267854049 1 880.5870239138603 MULTI CID FTMS 0 0 0 21803 73778.984375 0.7388399199862805 24 -0.2545623779296875 1 Unmodified _VPLVAGLVI_ ENSG00000125726|ENST00000245903|CD70;nc|ENSG00000125726|P32970-2|CD70 45.7499826716795 0.0496882803020414 3 [{I|L}P]VAVAVV{I|L} 9 4 + 63.734 0.0 0.0 7.2459 7.2459 84.409 0.0 0.0 0.0 7.147642715192504 41.69006780958576 7.147642715192504 3.0102999566398125 0 0.6109243748081782 0.0 0.0 0.0 [{I|L}P]VAVAVV{I|L};[{I|L}P]VVAAVV{I|L};[{I|L}P]VAVG{I|L}V{I|L};[{I|L}P]AVVAVV{I|L};[{I|L}P]VVAG{I|L}V{I|L};[{I|L}P]VAG{I|L}VV{I|L};[{I|L}P]VAAVVV{I|L};[{I|L}P]VAVVAV{I|L};[VP]{I|L}AVAVV{I|L};[{I|L}P]AVVG{I|L}V{I|L} 7.2459;6.9037;6.9037;6.6065;6.5615;6.4513;6.3613;6.2851;6.2851;6.2642 -;-;-;-;-;-;-;-;-;- 1584 1 2.304 75371.7 0.3199999928474426 15434 6368 21803 HBL1_DMSO_200M_050219_1,21804 HBL1_DMSO_200M_050219_1,21804,VPLVAGLVI True True VPLVAGLVI 108.48761 880.58702391386 999533.6875 21803.0 ENSG00000125726|ENST00000245903|CD70;;nc|ENSG00000125726|P32970-2|CD70 2.798478484153748 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21807 108.5 142.0 406680.0 25 0 58012.0 17757 KQFDDVLIYL 10 63 627.3427176208461 1252.670882308492 2 627.3423950076103 MULTI CID FTMS 0 0 0 21806 227700.546875 0.4210621102104774 -12 0.0790939331054687 1 Unmodified _KQFDDVLIYL_ ENSG00000105948|ENST00000464848|TTC26;nc|ENSG00000105948|A0AVF1-2|IFT56;nc|ENSG00000105948|A0AVF1-3|IFT56 20.41453444215458 0.5050059513928961 3 [{I|L}P]S[YE][KQ]{I|L}Y{I|L} 10 7 + 36.176 0.0 0.0 2.8879 2.8879 82.483 0.0 0.0 0.0 15.374015516889372 6.706962271689747 6.706962271689747 36.17599686953518 0 0.6989700043360187 1.3979400086720375 0.7302046884880937 0.0 [{I|L}P]S[YE][KQ]{I|L}Y{I|L} 2.8879 - 68 1 2.304 49770.4 1.0 15435 6370 21806 HBL1_DMSO_200M_050219_1,21807 HBL1_DMSO_200M_050219_1,21807,KQFDDVLIYL False True RILDIDIPLSV 108.49709 627.34239500761 1896507.625 21806.0 ENSG00000115112|ENST00000263707|TFCP2L1 1.9327578743298848 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21808 108.51 464.0 143530.0 25 0 18377.0 + 33995 SLINVGLISV 10 97 507.8129745409781 1013.6113961487562 2 507.8130981326103 MULTI CID FTMS 0 0 0 21806 139382.140625 0.6257045917981204 -9 0.0545654296875 2 Unmodified _SLINVGLISV_ ENSG00000136938|ENST00000339399|ANP32B;ENST00000473205.1_1_9:100746884-100764563:+|nuORF;ENST00000564205.1_1_15:75614457-75614928:-|nuORF;nc|ENSG00000136938|Q92688-2|ANP32B 55.24861242081279 0.0493457817857391 3 {[TV]|[{I|L}S]}{I|L}NVG{I|L} 7 3 50.311 0.0 0.0 4.9635 0.0 0.0 0.0 314.17014794002495 314.17014794002495 28.87092212258005 0.0 0.0 0.0 0 0.2396518287104437 1.6989700043360187 0.4247425010840047 1.579689690656103 + {[TV]|[{I|L}S]}{I|L}NVG{I|L} 4.9635 + + 996 1 2.304 55413.8 1.0 15436 6370 21806 HBL1_DMSO_200M_050219_1,21808 HBL1_DMSO_200M_050219_1,21808,SLINVGLISV True True SLINVGLISV 108.50532 507.81309813261 2795028.75 21806.0 ENST00000473205.1_1_9:100746884-100764563:+|nuORF;;ENST00000564205.1_1_15:75614457-75614928:-|nuORF;;nc|ENSG00000136938|Q92688-2|ANP32B;;ENSG00000136938|ENST00000339399|ANP32B 4.5822804768880205 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21809 108.52 800.0 48413.0 25 0 5399.4 -1 0 50 966.1189255961252 2895.3349473885755 3 966.4526244997978 MULTI CID FTMS 0 0 0 21806 83057.9765625 0.0694168243473784 -38 0.3942108154296875 3 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 52.573 0.0 0.0 1.8158 0.0 0.0 0.0 1854.7229785519005 1854.7229785519005 19.857762962285577 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8158 - 55 1 2.304 37074.5 0.3300000131130218 15437 6370 21806 HBL1_DMSO_200M_050219_1,21809 HBL1_DMSO_200M_050219_1,21809, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21812 108.53 273.0 147130.0 25 0 13338.0 39994 VGCSRVGERAL 11 68 573.8057280319593 1145.5969031307186 2 573.8057128787041 MULTI CID FTMS 0 0 0 21811 176184.546875 0.4250853653277133 -32 0.2623062133789062 1 Unmodified _VGCSRVGERAL_ ENST00000448568.6_1_11:62473033-62473631:-|nuORF 17.11289562659939 0.6791789249425932 3 [PA]EE{I|L}{M(Oxidation (M))|F}T 7 10 32.695 0.0 0.0 2.854 0.0 0.0 0.0 355.1947784571436 355.1947784571436 10.299632233774432 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 [PA]EE{I|L}{M(Oxidation (M))|F}T 2.854 - 115 1 2.304 38298.0 1.0 15438 6372 21811 HBL1_DMSO_200M_050219_1,21812 HBL1_DMSO_200M_050219_1,21812,VGCSRVGERAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_1 21816 108.55 565.0 273760.0 25 0 26544.0 + 26090 NPFLFSTI 8 97 938.4991053547456 937.4918288881456 1 938.4999267458916 MULTI CID FTMS 0 0 0 21815 204396.78125 0.9707443777033984 4 -0.071624755859375 1 Unmodified _NPFLFSTI_ ENSG00000177683|ENST00000415914|THAP5;nc|ENSG00000177683|Q7Z6K1-2|THAP5 141.82661023413823 8.158739116041229e-06 3 [NP]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}ST{I|L} 8 0 + 97.698 0.0 0.0 10.421 10.421 93.616 0.0 0.0 0.0 8.163033151844715 12.914930551903224 8.163033151844715 8.163033151844715 0 1.1368617341927687 1.6989700043360187 0.8807196863200843 1.9386218330464624 + + [NP]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}ST{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N{I|L}{M(Oxidation (M))|F}ST{I|L};[NP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ST{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N{M(Oxidation (M))|F}ST{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N{M(Oxidation (M))|F}{I|L}ST{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F}NST{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}M{I|L}{M(Oxidation (M))|F}ST{I|L};[NP][VP]PNST{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GG{I|L}{M(Oxidation (M))|F}ST{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}ST{I|L} 10.421;9.5505;9.2226;8.1036;8.0049;6.9824;6.9233;6.8285;6.7503;6.2593 +;-;-;-;-;-;-;-;-;- + 1936 1 2.304 104225.5 1.0 15439 6375 21815 HBL1_DMSO_200M_050219_1,21816 HBL1_DMSO_200M_050219_1,21816,NPFLFSTI True True NPFLFSTI 108.55124 938.499926745892 2008615.75 21815.0 ENSG00000177683|ENST00000415914|THAP5;;nc|ENSG00000177683|Q7Z6K1-2|THAP5 7.932660579681396 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21817 108.56 437.0 527360.0 25 0 137540.0 + 24496 MIIPSLEEL 9 91 1044.5637574768346 1043.5564810102346 1 1044.563891589642 MULTI CID FTMS 0 0 0 21815 223101.421875 0.2836934037412385 -20 0.1381912231445312 2 Unmodified _MIIPSLEEL_ ENSG00000137804|ENST00000559596|NUSAP1;ENST00000558123.5_1_15:41625155-41634596:+|nuORF;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;nc|ENSG00000137804|Q9BXS6-7|NUSAP1 179.22989800431262 1.458777770570951e-07 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PS{I|L}EE{I|L} 9 0 + 89.243 0.0 0.0 8.5518 8.5518 89.816 0.0 0.0 0.0 9.36378712641232 16.18873985932663 9.36378712641232 5.1500643135290005 0 2.159097005026964 1.6989700043360187 1.3829131673969606 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PS{I|L}EE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PSE{I|L}E{I|L};[PS]{I|L}{I|L}M{I|L}EE{I|L};[PS]{I|L}EE{I|L}P{M(Oxidation (M))|F}{I|L};[PS]{I|L}EE{I|L}{I|L}M{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}S{I|L}EE{I|L};[PS]{I|L}{I|L}ME{I|L}E{I|L};[PS]{I|L}E{M(Oxidation (M))|F}{I|L}{I|L}[EP];[PS]{I|L}E{I|L}M{I|L}E{I|L};[PS]{I|L}E{M(Oxidation (M))|F}{I|L}[EP]{I|L} 8.5518;8.0583;7.6545;7.4229;7.3673;7.2072;7.161;7.0005;6.9197;6.915 +;-;-;-;-;-;-;-;-;- + 2842 1 2.304 149000.7 1.0 15440 6375 21815 HBL1_DMSO_200M_050219_1,21817 HBL1_DMSO_200M_050219_1,21817,MIIPSLEEL True True MIIPSLEEL 108.55906 1044.56389158964 11030965.0 21815.0 nc|ENSG00000137804|Q9BXS6-5|NUSAP1;;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;;ENSG00000137804|ENST00000559596|NUSAP1;;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;;nc|ENSG00000137804|Q9BXS6-7|NUSAP1;;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;;ENST00000558123.5_1_15:41625155-41634596:+|nuORF 7.069589455922444 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21820 108.58 730.0 266940.0 25 0 31159.0 + -1 IPISNILMV 9 94 999.5909505158448 0 999.586474597454 PEAK CID FTMS 0 0 0 21819 142648.359375 0.0279523633294479 68 -0.8483963012695312 1 ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 3 VM{I|L}{I|L}{I|L}NS 7 -1 52.031 0.0 0.0 2.6053 0.0 0.0 1016.5886260299334 207.11428247623283 1223.7029085061663 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8366968715561641 1.548455006504028 VM{I|L}{I|L}{I|L}NS 2.6053 - 6908 + 1 2.304 128822.9 1.0 15441 6377 21819 HBL1_DMSO_200M_050219_1,21820 HBL1_DMSO_200M_050219_1,21820, False False IPISNILMV 108.57836 999.586474597454 39032012.0 21819.0 ENSG00000137959|ENST00000370751|IFI44L;;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 3.85741138458252 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21821 108.59 800.0 84684.0 25 0 8837.5 -1 0 61 724.8408370728208 2895.334242424883 4 725.3421508669853 MULTI CID FTMS 0 0 0 21819 73606.4375 0.2387531671154384 -31 0.2333450317382812 2 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 54.078 0.0 0.0 1.8678 0.0 0.0 0.0 1854.721325611784 1854.721325611784 34.6585404819125 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8678 - 199 1 2.304 60461.1 0.8700000047683716 15442 6377 21819 HBL1_DMSO_200M_050219_1,21821 HBL1_DMSO_200M_050219_1,21821, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21823 108.6 353.0 164320.0 25 0 18145.0 + 38922 TVLQELINV 9 82 514.8029361067062 1027.5913192802122 2 514.8031494021416 MULTI CID FTMS 0 0 0 21822 185180.46875 0.2695023949148615 31 -0.3362655639648437 1 Unmodified _TVLQELINV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 56.17704186161178 0.0281986971544335 3 {[TV]|[{I|L}S]}{I|L}QE{I|L} 6 3 53.109 0.0 0.0 5.1683 0.0 0.0 0.0 341.1831521261685 341.1831521261685 29.86030867786233 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.9247425010840048 0.5 + {[TV]|[{I|L}S]}{I|L}QE{I|L} 5.1683 + + 473 1 2.304 48191.0 1.0 15443 6378 21822 HBL1_DMSO_200M_050219_1,21823 HBL1_DMSO_200M_050219_1,21823,TVLQELINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21824 108.61 449.0 180770.0 25 0 24274.0 + + 19855 YPLHILFV 8 99 501.2945391869157 1000.5745254406314 2 501.2945739626884 MULTI CID FTMS 0 0 0 21822 142095.203125 0.6119958026158078 2 -0.0222702026367187 2 Oxidation (M) _LHLM(Oxidation (M))LLFV_ nc|ENSG00000100280|Q10567-2|AP1B1;ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;nc|ENSG00000100280|Q10567-3|AP1B1 41.81723621529253 0.2038889569391319 3 [H{I|L}]P{I|L}Y{I|L}{M(Oxidation (M))|F}V 8 -1 + 52.836 0.0 0.0 5.2806 5.2806 78.276 0.0 0.0 0.0 18.494850021680094 36.096981436199016 18.494850021680094 3.0102999566398125 0 0.7429928190999391 1.3010299956639813 0.0 0.0 [H{I|L}]P{I|L}Y{I|L}{M(Oxidation (M))|F}V;[H{I|L}]{I|L}PY{I|L}{M(Oxidation (M))|F}V;[H{I|L}]PY{I|L}{I|L}{M(Oxidation (M))|F}V;[H{I|L}]P{I|L}{I|L}Y{M(Oxidation (M))|F}V;[H{I|L}]{I|L}P{I|L}Y{M(Oxidation (M))|F}V;[H{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}V;[H{I|L}]P{I|L}{I|L}{M(Oxidation (M))|F}YV;[H{I|L}]{I|L}P{I|L}{M(Oxidation (M))|F}YV;[H{I|L}]P{I|L}{M(Oxidation (M))|F}{I|L}YV;[H{I|L}]{I|L}P{M(Oxidation (M))|F}{I|L}YV 5.2806;4.9797;4.9797;4.9797;4.6789;4.6789;4.0031;3.7023;3.5263;3.2254 -;-;-;-;-;+;-;-;-;- + 276 1 2.304 65221.6 1.0 15444 6378 21822 HBL1_DMSO_200M_050219_1,21824 HBL1_DMSO_200M_050219_1,21824,LHLMLLFV False False YPLHILFV 108.61039 501.294573962688 1940623.75 21822.0 nc|ENSG00000100280|Q10567-2|AP1B1;;ENSG00000100280|ENST00000357586|AP1B1;;nc|ENSG00000100280|Q10567-4|AP1B1;;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;;nc|ENSG00000100280|Q10567-3|AP1B1 4.575536568959554 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21827 108.63 800.0 89210.0 25 0 11222.0 + 26660 NYIDRFLSSM 10 80 623.3001799813549 1244.5858070295096 2 623.3000366091728 MULTI CID FTMS 0 0 0 21826 73501.6953125 0.0481055334567904 49 -0.62939453125 1 Unmodified _NYIDRFLSSM_ ENSG00000145386|ENST00000274026|CCNA2 92.20098385977256 0.0091758589193359 3 [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM 10 0 + 87.317 0.0 0.0 7.0158 7.0158 94.581 0.0 0.0 0.0 21.27758779335053 69.16895006820745 21.27758779335053 35.12855516949504 0 2.742992819099939 2.0 0.3054621874040891 0.6989700043360187 + + [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM;{[CT]|[{M(Oxidation (M))|F}G]}[VS]DR{M(Oxidation (M))|F}{I|L}SSM;[AG][YV]DR{M(Oxidation (M))|F}{I|L}SSM 7.0158;4.1933;3.6087 +;-;- + 281 1 2.304 57390.2 0.3300000131130218 15445 6380 21826 HBL1_DMSO_200M_050219_1,21827 HBL1_DMSO_200M_050219_1,21827,NYIDRFLSSM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21831 108.66 800.0 99449.0 25 0 20554.0 + 33566 SILSLVTKI 9 81 487.31837868016817 972.6222044271364 2 487.3179504275322 MULTI CID FTMS 0 0 0 21830 111971.21875 1.0 0 0.0 1 Unmodified _SILSLVTKI_ ENSG00000143621|ENST00000361891|ILF2 79.59630418116434 0.0176145593575188 3 {[TV]|[{I|L}S]}{I|L}S{I|L}VTK{I|L} 9 0 + 88.708 0.0 0.0 9.1205 9.1205 99.179 0.0 0.0 0.0 73.77259154210577 12.25268461881508 12.25268461881508 88.70760417918994 0 1.555462187404089 2.0 0.6989700043360187 0.0 + + {[TV]|[{I|L}S]}{I|L}S{I|L}VTK{I|L} 9.1205 + + 239 + 1 2.304 65549.0 0.8999999761581421 15446 6383 21830 HBL1_DMSO_200M_050219_1,21831 HBL1_DMSO_200M_050219_1,21831,SILSLVTKI True True SILSLVTKI 108.65532 487.317950427532 664916.1875 21830.0 ENSG00000143621|ENST00000361891|ILF2 3.0767029921213784 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21832 108.67 800.0 107780.0 25 0 28194.0 + 29808 QQHSILLLL 9 91 532.8269588089037 1063.6393646846072 2 532.8271362185478 MULTI CID FTMS 0 0 0 21830 85912.609375 0.5876253006440636 -14 0.1513595581054687 2 Unmodified _QQHSILLLL_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 71.92227651296345 0.0203558744033348 3 [HS]QQ{I|L}{I|L}{I|L}{I|L}{I|L} 9 4 + 70.697 0.0 0.0 6.6467 6.6467 88.22 0.0 0.0 0.0 1.935749724493121 50.700754529854 1.935749724493121 8.037275116073346 0 0.9247425010840048 0.0 1.5356668758921828 1.1989700043360187 [HS]QQ{I|L}{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}[HS]QQ{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}HQQ{I|L}{I|L}{I|L}{I|L};[HS]{I|L}QQ{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}[HS][AG]Q{I|L}{I|L}{I|L};{I|L}{I|L}[HS]Q[AG]{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}H{I|L}QQ{I|L}{I|L}{I|L};[HS]{I|L}{I|L}QQ{I|L}{I|L}{I|L};{I|L}{I|L}QQ[HS]{I|L}{I|L}{I|L};{I|L}{I|L}[HS]Q{I|L}Q{I|L}{I|L} 6.6467;5.891;5.2616;5.1872;5.0253;5.0253;4.8334;4.7589;4.6942;4.4766 -;-;-;-;-;-;-;-;-;- 536 1 2.304 72044.7 0.8299999833106995 15447 6383 21830 HBL1_DMSO_200M_050219_1,21832 HBL1_DMSO_200M_050219_1,21832,QQHSILLLL True True QQHSILLLL 108.66915 532.827136218548 2244936.75 21830.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 2.5367074807484946 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21834 108.69 800.0 100950.0 25 0 8081.4 -1 0 64 1102.8576186457892 3305.551026537568 3 1103.524829089642 MULTI CID FTMS 0 0 0 21833 127152.9765625 0.1015012911376439 113 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 57.089 0.0 0.0 1.727 0.0 0.0 0.0 2264.93442432493 2264.93442432493 32.83600331340708 0.0 0.0 0.0 0 2.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.727 - 180 1 2.304 61875.6 0.4099999964237213 15448 6384 21833 HBL1_DMSO_200M_050219_1,21834 HBL1_DMSO_200M_050219_1,21834, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21841 108.72 800.0 276050.0 25 0 16241.0 + 23557 LTLSGLLGV 9 126 872.5448470259515 871.5375705593515 1 872.5460693240166 MULTI CID FTMS 0 0 0 21840 184606.984375 0.728742674082935 -10 0.09088134765625 1 Unmodified _LTLSGLLGV_ nc|ENSG00000179915|P58400-1|NRXN1;nc|ENSG00000179915|P58400|NRXN1 77.98433622928108 0.0180125044636492 3 {I|L}{I|L}GST{I|L}{I|L}GV 9 3 + 84.848 0.0 0.0 9.7355 9.7355 91.343 0.0 0.0 0.0 15.548312160122109 14.973024840566469 14.973024840566469 5.836134377877329 0 0.9291746928241124 1.5228787452803376 2.3494850021680094 0.0 {I|L}{I|L}GST{I|L}{I|L}GV;{I|L}{I|L}G{I|L}ST{I|L}GV;{I|L}{I|L}GTS{I|L}{I|L}GV;{I|L}{I|L}GS{I|L}T{I|L}GV;{I|L}{I|L}G{I|L}TS{I|L}GV;{I|L}{I|L}GST{I|L}G{I|L}V;{I|L}{I|L}TGS{I|L}{I|L}GV;[{I|L}T]{I|L}GS{I|L}{I|L}GV;{I|L}{I|L}GTVT{I|L}GV;[{I|L}T]KE{I|L}{I|L}GV 9.7355;9.0658;8.9027;8.7512;8.4785;8.3719;8.1534;7.9514;7.9184;7.91 -;-;-;-;-;-;-;-;-;- 2584 1 2.304 145734.0 0.7599999904632568 15449 6390 21840 HBL1_DMSO_200M_050219_1,21841 HBL1_DMSO_200M_050219_1,21841,LTLSGLLGV True True TSIGLLLGV 108.72173 872.546069324017 1775833.0 21840.0 ENST00000454465.1_1_2:87355723-87398314:+|nuORF;;ENST00000485325.1_1_2:112560984-112579093:-|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 3.535635232925415 1.0 False 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 21844 108.74 501.0 379920.0 25 0 28266.0 -1 0 119 827.3953017656797 3305.5521011963187 4 827.6459228396416 MULTI CID FTMS 0 0 0 21843 70649.8828125 0.0450690395916859 82 -0.9219589233398438 1 3 [Q{I|L}]VS{I|L}{I|L}GD{I|L}V 10 -1 57.604 0.0 0.0 1.7426 0.0 0.0 0.0 2264.939561286967 2264.939561286967 43.61941264025135 0.0 0.0 0.0 0 1.0 0.0 1.9802046884880933 0.0 [Q{I|L}]VS{I|L}{I|L}GD{I|L}V 1.7426 - 2529 1 2.304 136567.5 1.0 15450 6392 21843 HBL1_DMSO_200M_050219_1,21844 HBL1_DMSO_200M_050219_1,21844, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21847 108.75 395.0 307690.0 25 0 70073.0 + 24569 MLFPGSIAL 9 100 948.5229025533384 947.5156260867384 1 948.5218383669852 MULTI CID FTMS 0 0 0 21846 190634.59375 0.6533858572001747 -14 0.12677001953125 1 Unmodified _MLFPGSIAL_ ENSG00000101367|ENST00000375571|MAPRE1 101.72198241140316 0.010086100337927 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}M{I|L}A{I|L} 9 4 + 74.624 0.0 0.0 7.8758 7.8758 87.85 0.0 0.0 0.0 11.84955642535897 16.478174818886373 11.84955642535897 4.370470067515498 0 0.5 1.3979400086720375 1.960409376976188 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}M{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSP{M(Oxidation (M))|F}{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PGS{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}P{M(Oxidation (M))|F}A{I|L};[PG]S{I|L}{M(Oxidation (M))|F}M{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}{I|L}MA{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSP{I|L}{M(Oxidation (M))|F}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[SG]M{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}MGS{I|L}A{I|L};[PG]S{I|L}M{M(Oxidation (M))|F}{I|L}A{I|L} 7.8758;7.4145;7.0911;6.911;6.6252;6.4744;6.4497;6.4422;6.2457;6.164 -;-;+;-;-;-;-;-;-;- + 1795 1 2.304 85505.2 1.0 15451 6394 21846 HBL1_DMSO_200M_050219_1,21847 HBL1_DMSO_200M_050219_1,21847,MLFPGSIAL True True MLFPGSIAL 108.75086 948.521838366985 3623884.5 21846.0 ENSG00000101367|ENST00000375571|MAPRE1 9.738698323567707 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21849 108.76 126.0 489020.0 25 0 113050.0 + 17758 KQFDDVLIYL 10 63 627.3427176208461 1252.670882308492 2 627.3427001833916 MULTI CID FTMS 0 0 0 21848 372231.71875 0.6883280481104375 13 -0.1735458374023437 1 Unmodified _KQFDDVLIYL_ ENSG00000105948|ENST00000464848|TTC26;nc|ENSG00000105948|A0AVF1-2|IFT56;nc|ENSG00000105948|A0AVF1-3|IFT56 47.594388314883695 0.0942698883389255 3 DV{I|L}{I|L}Y{I|L} 6 4 60.508 0.0 0.0 4.8303 0.0 0.0 518.2513294904312 0.0 518.2513294904312 0.0 41.30001899740286 0.0 0.0 0 0.8807196863200843 0.0 1.055462187404089 0.0 + DV{I|L}{I|L}Y{I|L} 4.8303 + + 277 1 2.304 57096.4 1.0 15452 6395 21848 HBL1_DMSO_200M_050219_1,21849 HBL1_DMSO_200M_050219_1,21849,KQFDDVLIYL True True KQFDDVLIYL 108.756 627.342700183392 8727802.0 21848.0 ENSG00000105948|ENST00000464848|TTC26;;nc|ENSG00000105948|A0AVF1-3|IFT56;;nc|ENSG00000105948|A0AVF1-2|IFT56 5.641700267791748 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21850 108.77 800.0 83108.0 25 0 10762.0 + 18219 KVFELDLVTL 10 94 588.8475990202687 1175.680645107337 2 588.8480102419853 MULTI CID FTMS 0 0 0 21848 93703.8125 0.1060701088384175 -19 0.1917953491210937 2 Unmodified _KVFELDLVTL_ ENSG00000117724|ENST00000366955|CENPF 40.23920728925047 0.1550410903091231 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}D{I|L}VT{I|L} 10 2 + 57.27 0.0 0.0 4.8712 4.8712 73.258 0.0 0.0 0.0 8.86056647693163 10.012262311882765 8.86056647693163 0.796896906561031 0 0.7742275032520141 1.3979400086720375 0.7302046884880937 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}D{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L}VKVT{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}{I|L}VKVT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}DV{I|L}T{I|L};[{M(Oxidation (M))|F}E]VK{I|L}D{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DK{I|L}D{I|L}VT{I|L};[{M(Oxidation (M))|F}E]VE{I|L}VKVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DE{I|L}VKVT{I|L};[{M(Oxidation (M))|F}E]VK{I|L}DV{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DK{I|L}DV{I|L}T{I|L} 4.8712;4.8034;4.3976;4.1681;4.1175;4.073;4.0498;4.0052;3.4145;3.3699 -;-;-;-;-;-;-;-;-;- 997 1 2.304 57567.8 0.3400000035762787 15453 6395 21848 HBL1_DMSO_200M_050219_1,21850 HBL1_DMSO_200M_050219_1,21850,KVFELDLVTL False True KVFELDLVTL 108.76988 588.848010241985 13571577.0 21848.0 ENSG00000117724|ENST00000366955|CENPF 6.52453597386678 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21851 108.78 800.0 83005.0 25 0 10515.0 + 33996 SLINVGLISV 10 91 507.8129745409781 1013.6113961487562 2 507.8132507205009 MULTI CID FTMS 0 0 0 21848 92586.2109375 0.4156315655722705 16 -0.21246337890625 3 Unmodified _SLINVGLISV_ ENSG00000136938|ENST00000339399|ANP32B;ENST00000473205.1_1_9:100746884-100764563:+|nuORF;ENST00000564205.1_1_15:75614457-75614928:-|nuORF;nc|ENSG00000136938|Q92688-2|ANP32B 79.42699986076722 0.0175374121712975 3 {[TV]|[{I|L}S]}{I|L}NVG{I|L} 7 3 51.824 0.0 0.0 5.1128 0.0 0.0 0.0 314.16880516658745 314.16880516658745 26.289938300073324 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 1.341129063296272 1.325257498915995 + {[TV]|[{I|L}S]}{I|L}NVG{I|L} 5.1128 + + 726 1 2.304 58135.6 0.3400000035762787 15454 6395 21848 HBL1_DMSO_200M_050219_1,21851 HBL1_DMSO_200M_050219_1,21851,SLINVGLISV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21852 108.8 800.0 13591.0 25 0 1168.3 -1 0 34 907.5453369021416 0 907.5453369021416 PEAK CID FTMS 0 0 0 -1 0 4 3 {I|L} 1 -1 6.9897 0.0 0.0 0.38552 0.0 0.0 1036.7013782947142 660.2697847955686 1696.971163090283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.38552 - 1 + 1 2.304 17619.8 0.3199999928474426 15455 6395 21848 HBL1_DMSO_200M_050219_1,21852 HBL1_DMSO_200M_050219_1,21852, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21854 108.8 70.0 525100.0 25 0 58299.0 -1 0 42 966.1189255961252 2895.3349473885755 3 966.4542114138604 MULTI CID FTMS 0 0 0 21853 951435.5 0.7951750537970511 -12 0.1283950805664062 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 53.822 0.0 0.0 1.8589 0.0 0.0 0.0 1854.7227456813064 1854.7227456813064 34.11745028500839 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8589 - 123 1 2.304 32978.0 1.0 15456 6396 21853 HBL1_DMSO_200M_050219_1,21854 HBL1_DMSO_200M_050219_1,21854, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21855 108.81 143.0 231690.0 25 0 16192.0 + 12748 GVPAEELFTAI 11 70 573.8057280319593 1145.5969031307186 2 573.8060790896416 MULTI CID FTMS 0 0 0 21853 310913.125 0.7501487597523214 -8 0.1003494262695312 2 Unmodified _GVPAEELFTAI_ chrX:1629939-1633150|29|10.55|0.57|4.21|+|ENST00000381229|ASMT,ASMT;chrX:1629939-1636438|32|10.19|0.46|4.47|+|ENST00000381233|ASMT,ASMT;ENSG00000196433|ENST00000381241|ASMT;nc|ENSG00000292336|P46597-2|ASMT;nc|ENSG00000292336|P46597|ASMT 10.073929032068715 0.8255972128077141 3 [PA]EE{I|L}{M(Oxidation (M))|F} 6 5 26.138 0.0 0.0 2.2816 0.0 0.0 0.0 456.2469024805811 456.2469024805811 -0.0603795499731774 0.0 -0.0603795499731774 0.0 0 0.0 0.8860566476931632 0.0 0.0 + [PA]EE{I|L}{M(Oxidation (M))|F} 2.2816 + + 69 1 2.304 30690.9 1.0 15457 6396 21853 HBL1_DMSO_200M_050219_1,21855 HBL1_DMSO_200M_050219_1,21855,GVPAEELFTAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21856 108.82 800.0 105770.0 25 0 21345.0 + 19971 LIIDEIHLL 9 65 539.8291258538129 1077.6436987744255 2 539.8294555544853 MULTI CID FTMS 0 0 0 21853 95231.5703125 0.2776053264261089 -12 0.1283950805664062 3 Unmodified _LIIDEIHLL_ ENSG00000112249|ENST00000369162|ASCC3 60.38955033654506 0.025866396858536 3 {I|L}{I|L}{I|L}DE{I|L}H{I|L}{I|L} 9 0 + 78.07 0.0 0.0 7.2445 7.2445 96.039 0.0 0.0 0.0 35.09418057675049 2.147642715192504 2.147642715192504 78.06987521229523 0 0.8494850021680094 2.0 1.274227503252014 0.0 + + {I|L}{I|L}{I|L}DE{I|L}H{I|L}{I|L} 7.2445 + + 229 + 1 2.304 71243.1 0.3499999940395355 15458 6396 21853 HBL1_DMSO_200M_050219_1,21856 HBL1_DMSO_200M_050219_1,21856,LIIDEIHLL True True LIIDEIHLL 108.81981 539.829455554485 2818087.75 21853.0 ENSG00000112249|ENST00000369162|ASCC3 1.8449709018071487 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21859 108.84 800.0 30442.0 25 0 2357.0 -1 0 52 1108.7353498968114 0 1108.619555652142 PEAK CID FTMS 0 0 0 -1 0 1 3 C(Carbamidomethyl (C))V{M(Oxidation (M))|F}D{I|L} 5 -1 15.406 0.0 0.0 0.69539 0.0 0.0 1224.0452104363978 354.1121004693969 1578.1573109057947 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))V{M(Oxidation (M))|F}D{I|L} 0.69539 - 69 + 1 2.304 25295.4 0.3199999928474426 15459 6398 21858 HBL1_DMSO_200M_050219_1,21859 HBL1_DMSO_200M_050219_1,21859, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21861 108.85 298.0 420800.0 25 0 34025.0 -1 0 104 724.8408370728208 2895.334242424883 4 725.3423950076103 MULTI CID FTMS 0 0 0 21860 168208.609375 0.5456090470940791 -9 0.1348648071289062 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 59.435 0.0 0.0 2.0528 0.0 0.0 0.0 1854.724267402112 1854.724267402112 7.949752477111041 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.535666875892183 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.0528 - 2661 1 2.304 101984.1 1.0 15460 6399 21860 HBL1_DMSO_200M_050219_1,21861 HBL1_DMSO_200M_050219_1,21861, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21864 108.87 800.0 16942.0 25 0 1121.3 -1 0 40 1031.585253894329 0 1031.585253894329 PEAK CID FTMS 0 0 0 -1 0 1 3 T 1 -1 6.9897 0.0 0.0 0.33912 0.0 0.0 217.9040760486208 1739.1653536432252 1957.069429691846 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.33912 - 31 + 1 2.304 18184.4 0.3499999940395355 15461 6401 21863 HBL1_DMSO_200M_050219_1,21864 HBL1_DMSO_200M_050219_1,21864, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21868 108.88 101.0 611150.0 25 0 197120.0 + 24497 MIIPSLEEL 9 46 1044.5637574768346 1043.5564810102346 1 1044.564135730267 MULTI CID FTMS 0 0 0 21867 458282.53125 0.5827472100931137 9 -0.1213455200195312 1 Unmodified _MIIPSLEEL_ ENSG00000137804|ENST00000559596|NUSAP1;ENST00000558123.5_1_15:41625155-41634596:+|nuORF;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;nc|ENSG00000137804|Q9BXS6-7|NUSAP1 64.23631603340823 0.0237365939569086 3 [PS]{I|L}E{I|L}{M(Oxidation (M))|F}PE{I|L} 9 6 + 79.703 0.0 0.0 7.6376 7.6376 93.89 0.0 0.0 0.0 11.673742220230436 12.730012720637376 11.673742220230436 11.673742220230436 0 0.5 1.3979400086720375 1.610924374808178 0.0 [PS]{I|L}E{I|L}{M(Oxidation (M))|F}PE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[PS]{I|L}EE{I|L};[PS]{I|L}E{I|L}M{I|L}E{I|L};[PS]{I|L}E{I|L}{M(Oxidation (M))|F}{I|L}[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[PS]E{I|L}E{I|L};[PS]{I|L}EE{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L};[PS]{I|L}E{I|L}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L};[PS]{I|L}ET[KQ]E{I|L};[PS]{I|L}T[KQ]EE{I|L};{[QN]|[E{I|L}]|[KN]}SP{I|L}{M(Oxidation (M))|F}PE{I|L} 7.6376;6.519;6.4373;6.4178;6.3503;6.2478;5.2431;5.1673;4.9454;4.6876 -;+;-;-;-;-;-;-;-;- + 346 1 2.304 46935.9 1.0 15462 6404 21867 HBL1_DMSO_200M_050219_1,21868 HBL1_DMSO_200M_050219_1,21868,MIIPSLEEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21869 108.89 264.0 31160.0 25 0 2283.8 -1 0 25 1110.239152070302 0 1110.568041980267 PEAK CID FTMS 0 0 0 21867 128644.9453125 1.0 0 0.0 2 3 Q 1 -1 5.4846 0.0 0.0 0.24722 0.0 0.0 1764.948047937676 322.44355188541255 2087.3915998230887 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.24722 - 1 + 1 2.304 16211.0 1.0 15463 6404 21867 HBL1_DMSO_200M_050219_1,21869 HBL1_DMSO_200M_050219_1,21869, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21870 108.9 800.0 12560.0 25 0 683.18 -1 0 29 1172.4849124384416 0 1172.094775378704 PEAK CID FTMS 0 0 0 -1 0 3 3 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.19651 0.0 0.0 1673.6196529024708 519.2533053033811 2192.872958205852 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19651 - 2 + 1 2.304 19801.5 0.6299999952316284 15464 6404 21867 HBL1_DMSO_200M_050219_1,21870 HBL1_DMSO_200M_050219_1,21870, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21873 108.92 800.0 99267.0 25 0 27536.0 + 29809 QQHSILLLL 9 80 532.8269588089037 1063.6393646846072 2 532.8269531130791 MULTI CID FTMS 0 0 0 21872 73070.390625 0.4997870577038889 9 -0.1564712524414062 1 Unmodified _QQHSILLLL_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 81.89019881105858 0.0170587746866453 3 {I|L}{I|L}SHQQ{I|L}{I|L}{I|L} 9 6 + 75.874 0.0 0.0 7.1334 7.1334 85.102 0.0 0.0 0.0 3.627815773883327 16.478174818886366 3.627815773883327 3.627815773883327 0 0.9247425010840048 1.6989700043360187 0.805462187404089 0.7302046884880937 {I|L}{I|L}SHQQ{I|L}{I|L}{I|L};[HS]QQ{I|L}{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}SHQ[AG]{I|L}{I|L}{I|L};{I|L}{I|L}SH[AG]Q{I|L}{I|L}{I|L};{I|L}{I|L}SH{I|L}QQ{I|L}{I|L};{I|L}{I|L}SHQ{I|L}Q{I|L}{I|L};{I|L}{I|L}SH{I|L}Q[AG]{I|L}{I|L};{I|L}{I|L}SH{I|L}[AG]Q{I|L}{I|L};{I|L}{I|L}SH[AG]{I|L}Q{I|L}{I|L};{I|L}{I|L}SHQ{I|L}[AG]{I|L}{I|L} 7.1334;6.7923;6.2677;6.2677;5.9109;5.719;5.0452;5.0452;4.8533;4.8533 -;-;-;-;-;-;-;-;-;- 442 1 2.304 66992.1 0.3600000143051147 15465 6406 21872 HBL1_DMSO_200M_050219_1,21873 HBL1_DMSO_200M_050219_1,21873,QQHSILLLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21877 108.93 202.0 45186.0 25 0 3319.9 -1 0 28 1155.794970691204 0 1155.794970691204 PEAK CID FTMS 0 0 0 -1 0 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.304 14294.0 1.0 15466 6409 21876 HBL1_DMSO_200M_050219_1,21877 HBL1_DMSO_200M_050219_1,21877, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21878 108.94 429.0 93343.0 25 0 5817.3 -1 0 65 994.5799041167292 0 994.5832397341728 PEAK CID FTMS 0 0 0 21876 94126.25 0.8238356672070851 1 -0.030517578125 2 3 T{I|L}{I|L}YS 5 -1 35.037 0.0 0.0 1.7632 0.0 0.0 1142.6737720012331 264.1360872858032 1406.8098592870365 0.0 0.0 0.0 0.0 0 0.0 0.0 1.548455006504028 0.0 T{I|L}{I|L}YS 1.7632 - 399 + 1 2.304 34975.3 1.0 15467 6409 21876 HBL1_DMSO_200M_050219_1,21878 HBL1_DMSO_200M_050219_1,21878, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21879 108.95 147.0 575700.0 25 0 97235.0 + 3704 DAFLFNEL 8 78 968.4720494652996 967.4647729986996 1 968.472216784954 MULTI CID FTMS 0 0 0 21876 475593.53125 0.7495116524762214 9 -0.1927261352539062 3 Unmodified _DAFLFNEL_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 131.26759243768294 4.352573887416163e-05 3 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}NE{I|L} 8 0 + 75.108 0.0 0.0 7.7634 7.7634 89.335 0.0 0.0 0.0 6.020599913279625 16.409780573583326 6.020599913279625 6.020599913279625 0 1.4749073637206092 0.0 0.8996498648046138 0.9247425010840048 + + {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}NE{I|L};{[MS]|[{M(Oxidation (M))|F}A]}D{I|L}{M(Oxidation (M))|F}NE{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GGE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AD{M(Oxidation (M))|F}NE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}G{M(Oxidation (M))|F}E{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E{I|L}{M(Oxidation (M))|F}GE{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}NE{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}N{M(Oxidation (M))|F}E{I|L};{[MS]|[{M(Oxidation (M))|F}A]}D{I|L}{M(Oxidation (M))|F}GGE{I|L} 7.7634;7.1411;6.8549;6.845;6.4141;6.4082;6.3195;6.3132;6.3108;6.2326 +;-;-;-;-;-;-;-;-;- + 2885 1 2.304 66078.8 1.0 15468 6409 21876 HBL1_DMSO_200M_050219_1,21879 HBL1_DMSO_200M_050219_1,21879,DAFLFNEL True True DAFLFNEL 108.94555 968.472216784954 5386912.5 21876.0 ENSG00000183207|ENST00000595090|RUVBL2;;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;;nc|ENSG00000183207|Q9Y230-2|RUVBL2 5.911949793497722 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21880 108.96 800.0 89389.0 25 0 6054.3 -1 0 85 1102.8586950497645 3305.5542557494937 3 1103.523730456829 MULTI CID FTMS 0 0 0 21876 92189.0390625 0.5379510861096692 9 -0.1927261352539062 4 3 [H{I|L}]VEA{I|L}Y 7 -1 30.194 0.0 0.0 0.91344 0.0 0.0 0.0 2477.0927787917594 2477.0927787917594 13.199397642263335 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y 0.91344 - 102 1 2.304 54072.7 0.5 15469 6409 21876 HBL1_DMSO_200M_050219_1,21880 HBL1_DMSO_200M_050219_1,21880, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21883 108.98 800.0 85785.0 25 0 9441.5 + 2328 AQITMLQML 9 89 524.7802043817134 1047.5458558302266 2 524.7804443240166 MULTI CID FTMS 0 0 0 21882 51395.625 0.5276321877578303 1 -0.0302505493164062 1 Unmodified _AQITMLQML_ ENSG00000137207|ENST00000372422|YIPF3;ENST00000460547.6_1_6:43480707-43481025:-|nuORF 43.85829265575387 0.0542763391141878 3 [QA]{I|L}TM{I|L} 6 3 38.575 0.0 0.0 3.6824 0.0 0.0 0.0 387.1713800824329 387.1713800824329 14.265997036641592 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.8494850021680094 0.7059771852360797 + [QA]{I|L}TM{I|L} 3.6824 + + 567 1 2.304 61169.0 0.6299999952316284 15470 6411 21882 HBL1_DMSO_200M_050219_1,21883 HBL1_DMSO_200M_050219_1,21883,AQITMLQML True True AQITMLQML 108.9797 524.780444324017 529118.75 21882.0 ENSG00000137207|ENST00000372422|YIPF3;;ENST00000460547.6_1_6:43480707-43481025:-|nuORF 4.443652550379436 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21884 108.99 800.0 201350.0 25 0 26420.0 + 22416 LPTETFIPVI 10 87 1129.650175257351 1128.6428987907511 1 1129.649707019329 MULTI CID FTMS 0 0 0 21882 100856.7265625 0.7230745939081802 -8 0.0905990600585937 2 Unmodified _LPTETFIPVI_ ENSG00000119285|ENST00000366582|HEATR1 81.61307344734483 0.0157458389277943 3 [TP]ET{M(Oxidation (M))|F}{I|L}{I|L}PV{I|L} 10 2 + 91.235 0.0 0.0 8.0836 8.0836 89.814 0.0 0.0 0.0 4.259687322722812 52.62935477059423 4.259687322722812 5.964015683995783 0 0.805462187404089 0.0 2.504432191740108 0.0 [TP]ET{M(Oxidation (M))|F}{I|L}{I|L}PV{I|L};[TP]ET{I|L}{M(Oxidation (M))|F}{I|L}PV{I|L};[TP]E{I|L}T{M(Oxidation (M))|F}{I|L}PV{I|L};[{I|L}P]{[ET]|[MV]}T{M(Oxidation (M))|F}{I|L}PV{I|L};[TP]ET{I|L}{I|L}{M(Oxidation (M))|F}PV{I|L};[TP]ET{M(Oxidation (M))|F}{I|L}P{I|L}V{I|L};[{M(Oxidation (M))|F}T]ETP{I|L}{I|L}PV{I|L};[TP]ET{I|L}{M(Oxidation (M))|F}P{I|L}V{I|L};[TP]E{I|L}T{I|L}{M(Oxidation (M))|F}PV{I|L};[{I|L}P]{[ET]|[MV]}T{I|L}{M(Oxidation (M))|F}PV{I|L} 8.0836;7.5552;6.8302;6.7143;6.5268;6.4855;5.9753;5.957;5.8018;5.6859 -;-;-;+;-;-;-;-;-;- + 1438 1 2.304 103342.4 0.75 15471 6411 21882 HBL1_DMSO_200M_050219_1,21884 HBL1_DMSO_200M_050219_1,21884,LPTETFIPVI True True LPTETFIPVI 108.99357 1129.64970701933 1223503.75 21882.0 ENSG00000119285|ENST00000366582|HEATR1 4.253409067789714 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21887 109.01 800.0 175970.0 25 0 7370.6 -1 0 112 827.3953017656797 3305.5521011963187 4 827.8911620974541 MULTI CID FTMS 0 0 0 21886 30651.63671875 0.0190942410693636 104 1 3 [Q{I|L}]APRPY{I|L}V 9 -1 46.08 0.0 0.0 1.394 0.0 0.0 0.0 2264.938440404856 2264.938440404856 23.32264679816056 0.0 0.0 0.0 0 1.924742501084005 0.0 0.0 0.0 [Q{I|L}]APRPY{I|L}V 1.394 - 1351 1 2.304 104330.3 0.2599999904632568 15472 6413 21886 HBL1_DMSO_200M_050219_1,21887 HBL1_DMSO_200M_050219_1,21887, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21889 109.02 131.0 436020.0 25 0 64863.0 + 18220 KVFELDLVTL 10 81 588.8475990202687 1175.680645107337 2 588.8475219607353 MULTI CID FTMS 0 0 0 21888 883413.9375 1.0 0 0.0 1 Unmodified _KVFELDLVTL_ ENSG00000117724|ENST00000366955|CENPF 45.739877483867886 0.1051543674217965 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L}VKVT{I|L} 10 3 + 78.185 0.0 0.0 6.6502 6.6502 80.333 0.0 0.0 0.0 6.197887582883936 16.53212513775344 6.197887582883936 1.5186375580366729 0 0.9247425010840048 1.3979400086720375 0.7614393726401688 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L}VKVT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}D{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EVK{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}KD{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}KD{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EV{I|L}KVT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}EVKVT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}EVKVT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}E{M(Oxidation (M))|F}VKVT{I|L};[{M(Oxidation (M))|F}E]{I|L}D{I|L}VKVT{I|L} 6.6502;6.5211;6.5005;6.4148;6.4148;6.2444;6.1381;6.1381;6.1381;6.1231 -;-;-;-;-;-;-;-;-;- 3149 1 2.304 53238.3 1.0 15473 6414 21888 HBL1_DMSO_200M_050219_1,21889 HBL1_DMSO_200M_050219_1,21889,KVFELDLVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21890 109.03 800.0 50228.0 25 0 8299.3 -1 0 80 1057.5353437355006 2113.0561345378014 2 1057.610034167767 MULTI CID FTMS 0 0 0 21888 76996.1875 1.0 0 0.0 2 3 [NP]N{I|L}{I|L}A{M(Oxidation (M))|F}WCC{I|L} 11 -1 34.456 0.0 0.0 1.6306 0.0 0.0 0.0 835.4325743173514 835.4325743173514 23.998523516979347 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]N{I|L}{I|L}A{M(Oxidation (M))|F}WCC{I|L} 1.6306 - 658 1 2.304 36284.7 0.4399999976158142 15474 6414 21888 HBL1_DMSO_200M_050219_1,21890 HBL1_DMSO_200M_050219_1,21890, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21891 109.05 800.0 112460.0 25 0 3894.5 -1 0 108 795.403302437431 3177.584103883324 4 795.6545287966728 MULTI CID FTMS 0 0 0 21888 108303.4609375 1.0 0 0.0 3 3 {[QV]|[N{I|L}]|[RA]|[KV]}Q{[NV]|[RG]}H[C(Carbamidomethyl (C))R]MA{M(Oxidation (M))|F}VAN 14 -1 53.923 0.0 0.0 1.697 0.0 0.0 0.0 1519.7724208814632 1519.7724208814632 33.56569480265115 0.0 0.0 0.0 0 1.0 0.0 0.0 0.7302046884880937 {[QV]|[N{I|L}]|[RA]|[KV]}Q{[NV]|[RG]}H[C(Carbamidomethyl (C))R]MA{M(Oxidation (M))|F}VAN 1.697 - 1095 1 2.304 64915.1 0.699999988079071 15475 6414 21888 HBL1_DMSO_200M_050219_1,21891 HBL1_DMSO_200M_050219_1,21891, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21892 109.06 800.0 84745.0 25 0 18178.0 + 17759 KQFDDVLIYL 10 67 627.3427176208461 1252.670882308492 2 627.3431884646416 MULTI CID FTMS 0 0 0 21888 80960.1484375 0.1497108874435909 32 -0.43743896484375 4 Unmodified _KQFDDVLIYL_ ENSG00000105948|ENST00000464848|TTC26;nc|ENSG00000105948|A0AVF1-2|IFT56;nc|ENSG00000105948|A0AVF1-3|IFT56 40.23920728925047 0.1550410903091231 3 DV{I|L}{I|L}Y{I|L} 6 4 60.578 0.0 0.0 4.8359 0.0 0.0 518.2523670880875 0.0 518.2523670880875 0.0 45.17220322351953 0.0 0.0 0 0.8807196863200843 0.0 0.7614393726401688 0.0 + DV{I|L}{I|L}Y{I|L} 4.8359 + + 135 1 2.304 60564.5 0.3000000119209289 15476 6414 21888 HBL1_DMSO_200M_050219_1,21892 HBL1_DMSO_200M_050219_1,21892,KQFDDVLIYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21894 109.07 110.0 330770.0 25 0 41576.0 -1 0 45 966.1189255961252 2895.3349473885755 3 966.4546996951104 MULTI CID FTMS 0 0 0 21893 578814.3125 0.4837518697596323 7 -0.0889739990234375 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 55.583 0.0 0.0 1.9198 0.0 0.0 0.0 1854.720542441563 1854.720542441563 31.64320017660792 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9198 - 89 1 2.304 34269.7 1.0 15477 6415 21893 HBL1_DMSO_200M_050219_1,21894 HBL1_DMSO_200M_050219_1,21894, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21895 109.08 552.0 181220.0 25 0 36870.0 + 19972 LIIDEIHLL 9 63 539.8291258538129 1077.6436987744255 2 539.8290283083916 MULTI CID FTMS 0 0 0 21893 95228.75 0.277597105058241 7 -0.0889739990234375 2 Unmodified _LIIDEIHLL_ ENSG00000112249|ENST00000369162|ASCC3 60.38955033654506 0.025866396858536 3 {I|L}{I|L}{I|L}DE{I|L}H{I|L}{I|L} 9 0 + 78.797 0.0 0.0 7.3119 7.3119 85.675 0.0 0.0 0.0 31.35705552255025 2.632192780232785 2.632192780232785 3.6675055410631785 0 0.8494850021680094 2.0 1.25 0.0 + + {I|L}{I|L}{I|L}DE{I|L}H{I|L}{I|L};{I|L}{I|L}{I|L}DE{I|L}{I|L}[H{I|L}];{I|L}{I|L}{I|L}[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]{I|L}{I|L};{I|L}{I|L}[{M(Oxidation (M))|F}V]{I|L}[{M(Oxidation (M))|F}T]{I|L}{I|L} 7.3119;6.9716;4.2523;3.419 +;-;-;- + 316 + 1 2.304 79316.7 1.0 15478 6415 21893 HBL1_DMSO_200M_050219_1,21895 HBL1_DMSO_200M_050219_1,21895,LIIDEIHLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21896 109.08 364.0 564630.0 25 0 47759.0 + 25746 NIPDLSIYL 9 107 1047.572269959522 1046.564993492922 1 1047.571459949017 MULTI CID FTMS 0 0 0 21893 204648.671875 0.4468203078582425 -11 0.1844711303710937 3 Unmodified _NIPDLSIYL_ ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-2|CBLB;nc|ENSG00000114423|Q13191-3|CBLB 89.40071534611396 0.0152361884002446 3 {[QV]|[N{I|L}]|[RA]|[KV]}PD{I|L}S{I|L}Y{I|L} 9 0 + 81.948 0.0 0.0 7.8302 7.8302 84.928 0.0 0.0 0.0 2.513420893380257 16.478174818886373 2.513420893380257 2.513420893380257 0 1.089136830878453 1.5228787452803376 1.305462187404089 1.2753187046026266 + + {[QV]|[N{I|L}]|[RA]|[KV]}PD{I|L}S{I|L}Y{I|L};[DP]{I|L}S{I|L}N{I|L}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PS{I|L}D{I|L}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PD{I|L}SY{I|L}{I|L};[DP]{I|L}S{I|L}NY{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PS{I|L}DY{I|L}{I|L};[DP]{I|L}N{I|L}S{I|L}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}PD{I|L}Y{I|L};[DP]{I|L}S{I|L}YN{I|L}{I|L};[DP]{I|L}N{I|L}SY{I|L}{I|L} 7.8302;7.5901;7.5363;7.3176;7.0774;7.0236;6.9285;6.7172;6.7136;6.4158 +;-;-;-;-;-;-;-;-;- + 2385 1 2.304 132515.9 1.0 15479 6415 21893 HBL1_DMSO_200M_050219_1,21896 HBL1_DMSO_200M_050219_1,21896,NIPDLSIYL True True NIPDLSIYL 109.08327 1047.57145994902 3716133.75 21893.0 nc|ENSG00000114423|Q13191-2|CBLB;;nc|ENSG00000114423|Q13191-3|CBLB;;ENSG00000114423|ENST00000394030|CBLB 3.169945240020752 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21897 109.1 714.0 117700.0 25 0 9191.2 36516 TAFQGPWARL 10 101 573.8057280319593 1145.5969031307186 2 573.8058959841728 MULTI CID FTMS 0 0 0 21893 141176.46875 0.3406203997950388 11 -0.1309127807617187 4 Unmodified _TAFQGPWARL_ ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5 29.081581746732265 0.3152867722954398 3 [PA]EE{I|L}{M(Oxidation (M))|F}TA 8 8 55.372 0.0 0.0 4.8335 0.0 0.0 0.0 284.16750677613464 284.16750677613464 14.973024840566469 0.0 0.0 0.0 0 0.0 1.0 1.916386562212268 0.0 [PA]EE{I|L}{M(Oxidation (M))|F}TA 4.8335 - 1388 1 2.304 69918.1 1.0 15480 6415 21893 HBL1_DMSO_200M_050219_1,21897 HBL1_DMSO_200M_050219_1,21897,TAFQGPWARL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21900 109.11 286.0 287940.0 25 0 24476.0 -1 0 98 724.8408370728208 2895.334242424883 4 725.3424560427666 MULTI CID FTMS 0 0 0 21899 74974.8671875 0.2431918674922284 9 -0.0921096801757812 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 67.401 0.0 0.0 2.3279 0.0 0.0 0.0 1854.722681044033 1854.722681044033 32.80916152664654 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3807196863200844 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.3279 - 1426 1 2.304 67691.2 1.0 15481 6417 21899 HBL1_DMSO_200M_050219_1,21900 HBL1_DMSO_200M_050219_1,21900, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21901 109.12 800.0 165440.0 25 0 22576.0 + 41576 VPPEWVPII 9 102 525.3051953216246 1048.5958377100492 2 525.3053466677666 MULTI CID FTMS 0 0 0 21899 118797.9765625 0.0848797746021349 -50 0.63238525390625 2 Unmodified _VPPEWVPII_ ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 50.855029805455786 0.0384952370514206 3 [{I|L}P][DP]WVP{I|L}{I|L} 9 2 + 66.722 0.0 0.0 6.363 6.363 83.675 0.0 0.0 0.0 4.259687322722812 16.478174818886373 4.259687322722812 4.259687322722812 0 1.5629529932484498 2.0 0.0 0.0 [{I|L}P][DP]WVP{I|L}{I|L};[WE]PPVVP{I|L}{I|L};[EP]WPVVP{I|L}{I|L};[{I|L}P][DP]WP{I|L}V{I|L};[VP][EP]WVP{I|L}{I|L};[EP]PWVVP{I|L}{I|L};[{I|L}P][DP]WPV{I|L}{I|L};{[HG]|PP}EWVVP{I|L}{I|L};[EP]PVWVP{I|L}{I|L};[WE]PPVP{I|L}V{I|L} 6.363;5.9568;5.725;5.5529;5.5017;5.4379;5.4311;5.3338;5.1508;5.1466 -;-;-;-;+;-;-;-;-;- + 1039 1 2.304 120061.9 0.5400000214576721 15482 6417 21899 HBL1_DMSO_200M_050219_1,21901 HBL1_DMSO_200M_050219_1,21901,VPPEWVPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21905 109.15 800.0 113110.0 25 0 15436.0 + 42777 VVINFDFPKL 10 81 596.3423110185328 1190.6700691038654 2 596.3428222537041 MULTI CID FTMS 0 0 0 21904 79915.046875 0.4719721048496947 -10 0.170318603515625 1 Unmodified _VVINFDFPKL_ ENSG00000110367|ENST00000534980|DDX6 45.739877483867886 0.1051543674217965 3 VV{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F}P[K{I|L}] 10 0 + 98.136 0.0 0.0 8.2421 8.2421 93.026 0.0 0.0 0.0 76.88161603087728 5.764837301042718 5.764837301042718 9.164539485499262 0 0.8494850021680094 2.0 0.0 0.8494850021680094 + + VV{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F}P[K{I|L}];VV{I|L}GG{M(Oxidation (M))|F}D{M(Oxidation (M))|F}P[K{I|L}] 8.2421;7.4724 +;- + 218 + 1 2.304 75668.8 0.3300000131130218 15483 6420 21904 HBL1_DMSO_200M_050219_1,21905 HBL1_DMSO_200M_050219_1,21905,VVINFDFPKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21910 109.17 800.0 74382.0 25 0 32065.0 -1 0 38 619.187180788502 618.179904321902 1 619.1873657107353 MULTI CID FTMS 0 0 0 21909 77871.1171875 0.6212931158125549 -9 0.0968399047851562 1 3 {I|L} 1 -1 10.713 0.0 0.0 1.733 0.0 0.0 487.084641726002 0.0 487.084641726002 0.0 10.713337517843655 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.733 - 3 + 1 2.304 52688.6 0.3400000035762787 15484 6424 21909 HBL1_DMSO_200M_050219_1,21910 HBL1_DMSO_200M_050219_1,21910, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21911 109.19 800.0 81134.0 25 0 3112.0 -1 0 92 1173.9771207969432 0 1174.076342761517 PEAK CID FTMS 0 0 0 -1 0 2 3 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.23379 0.0 0.0 1472.4738787886783 723.3691723836457 2195.843051172324 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.23379 - 23 + 1 2.304 43304.1 0.3700000047683716 15485 6424 21909 HBL1_DMSO_200M_050219_1,21911 HBL1_DMSO_200M_050219_1,21911, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21915 109.21 800.0 21068.0 25 0 1313.0 -1 0 50 971.6142500306668 0 971.6148559451104 PEAK CID FTMS 0 0 0 21914 45591.33984375 0.6771394636414554 1 -0.0441131591796875 1 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.304 20653.3 0.3400000035762787 15486 6427 21914 HBL1_DMSO_200M_050219_1,21915 HBL1_DMSO_200M_050219_1,21915, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21916 109.23 800.0 24094.0 25 0 4374.4 -1 0 36 1101.8050532855443 0 1101.451831042767 PEAK CID FTMS 0 0 0 21914 11756.951171875 0.4737999350484468 1 -0.0441131591796875 2 3 EWD 3 -1 16.198 0.0 0.0 0.73573 0.0 0.0 1446.2830058857392 322.14106165103755 1768.4240675367766 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EWD 0.73573 - 38 + 1 2.304 21009.0 0.3799999952316284 15487 6427 21914 HBL1_DMSO_200M_050219_1,21916 HBL1_DMSO_200M_050219_1,21916, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21917 109.24 800.0 21602.0 25 0 2216.5 -1 0 48 1151.062426745892 0 1151.062426745892 PEAK CID FTMS 0 0 0 -1 0 3 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.304 20556.4 0.3700000047683716 15488 6427 21914 HBL1_DMSO_200M_050219_1,21917 HBL1_DMSO_200M_050219_1,21917, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21921 109.26 516.0 344250.0 25 0 48022.0 + 21765 LPMSIIIV 8 86 885.5480077000817 884.5407312334817 1 885.5482055544853 MULTI CID FTMS 0 0 0 21920 195738.890625 0.8384108882881245 -5 0.060089111328125 1 Unmodified _LPMSIIIV_ ENSG00000085719|ENST00000517490|CPNE3;ENSG00000100884|ENST00000689861|CPNE6;ENSG00000124772|ENST00000244751|CPNE5;ENSG00000139117|ENST00000331366|CPNE8;ENSG00000140848|ENST00000290776|CPNE2;ENSG00000144550|ENST00000383832|CPNE9;ENSG00000178773|ENST00000319518|CPNE7;ENST00000460657.1_1_14:24546029-24546936:+|nuORF;ENST00000546603.5_1_12:39047686-39073432:-|nuORF;ENST00000552259.5_1_12:39040880-39073423:-|nuORF;ENST00000557829.1_1_14:24545691-24546719:+|nuORF;ENST00000558995.5_1_14:24543475-24546936:+|nuORF;ENST00000567011.1_1_16:57179810-57181567:+|nuORF;nc|ENSG00000100884|O95741-2|CPNE6;nc|ENSG00000124772|Q9HCH3-2|CPNE5;nc|ENSG00000139117|Q86YQ8-2|CPNE8;nc|ENSG00000140848|Q96FN4-2|CPNE2;nc|ENSG00000144550|Q8IYJ1-2|CPNE9;nc|ENSG00000178773|Q9UBL6|CPNE7 104.31058478835162 0.0751567137887263 3 {NN|[MP]|[D{I|L}]|[EV]}S{I|L}{I|L}{I|L}{I|L}V 8 2 + 81.915 0.0 0.0 9.2607 9.2607 84.014 0.0 0.0 0.0 0.8087069225802423 7.085521743960328 0.8087069225802423 0.8087069225802423 0 0.5451140161145328 1.154901959985743 2.1549471895720984 0.0 {NN|[MP]|[D{I|L}]|[EV]}S{I|L}{I|L}{I|L}{I|L}V;[{I|L}P]MS{I|L}{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}S{I|L}{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}S{I|L}{I|L}{I|L}V{I|L};[{I|L}P]MS{I|L}{I|L}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}S{I|L}{I|L}V{I|L};[{I|L}P]M{I|L}S{I|L}{I|L}V;[WE]{I|L}{I|L}{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}S{I|L}{I|L}V;[{I|L}P]M{I|L}S{I|L}V{I|L} 9.2607;9.1693;8.8806;8.4596;8.3682;8.0795;7.8093;7.5707;7.5207;7.0083 -;+;-;-;-;-;-;-;-;- + 484 1 2.304 122195.9 1.0 15489 6430 21920 HBL1_DMSO_200M_050219_1,21921 HBL1_DMSO_200M_050219_1,21921,LPMSIIIV True True LPMSIIIV 109.25955 885.548205554485 1771129.0 21920.0 ENST00000546603.5_1_12:39047686-39073432:-|nuORF;;ENSG00000085719|ENST00000517490|CPNE3;;nc|ENSG00000144550|Q8IYJ1-2|CPNE9;;ENSG00000124772|ENST00000244751|CPNE5;;ENST00000567011.1_1_16:57179810-57181567:+|nuORF;;ENSG00000178773|ENST00000319518|CPNE7;;ENSG00000100884|ENST00000689861|CPNE6;;nc|ENSG00000178773|Q9UBL6|CPNE7;;ENSG00000139117|ENST00000331366|CPNE8;;ENST00000557829.1_1_14:24545691-24546719:+|nuORF;;ENST00000460657.1_1_14:24546029-24546936:+|nuORF;;nc|ENSG00000139117|Q86YQ8-2|CPNE8;;ENSG00000140848|ENST00000290776|CPNE2;;ENST00000558995.5_1_14:24543475-24546936:+|nuORF;;ENST00000552259.5_1_12:39040880-39073423:-|nuORF;;ENSG00000144550|ENST00000383832|CPNE9;;nc|ENSG00000140848|Q96FN4-2|CPNE2;;nc|ENSG00000124772|Q9HCH3-2|CPNE5;;nc|ENSG00000100884|O95741-2|CPNE6 5.447835604349772 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21924 109.28 572.0 104520.0 25 0 6596.7 -1 0 93 827.3955553284754 3305.5531154475016 4 827.6450073122978 MULTI CID FTMS 0 0 0 -1 0 1 3 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 34.117 0.0 0.0 1.0321 0.0 0.0 0.0 2364.0091450708014 2364.0091450708014 9.61467086037498 0.0 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.0321 - 455 1 2.304 48945.8 1.0 15490 6432 21923 HBL1_DMSO_200M_050219_1,21924 HBL1_DMSO_200M_050219_1,21924, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21927 109.29 436.0 125980.0 25 0 18799.0 + 18221 KVFELDLVTL 10 79 588.8475990202687 1175.680645107337 2 588.8475219607353 MULTI CID FTMS 0 0 0 21926 25515.951171875 0.028883346853326 20 -0.2374649047851562 1 Unmodified _KVFELDLVTL_ ENSG00000117724|ENST00000366955|CENPF 40.23920728925047 0.1550410903091231 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}D{I|L}VT{I|L} 10 2 + 61.865 0.0 0.0 5.262 5.262 76.998 0.0 0.0 0.0 5.4330502818412185 10.452490459521968 5.4330502818412185 2.2454626555970947 0 0.8182503180159344 1.3979400086720375 1.110924374808178 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}D{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EVK{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L}VKVT{I|L};[{M(Oxidation (M))|F}E]{I|L}DVK{I|L}VT{I|L};[{M(Oxidation (M))|F}E]{I|L}D{I|L}VKVT{I|L};[{M(Oxidation (M))|F}E]VK{I|L}D{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EV{I|L}KVT{I|L};[{M(Oxidation (M))|F}E]VEVK{I|L}VT{I|L};[{M(Oxidation (M))|F}E]{I|L}DV{I|L}KVT{I|L};[{M(Oxidation (M))|F}E]VE{I|L}VKVT{I|L} 5.262;5.071;4.897;4.7999;4.6259;4.5851;4.4912;4.3941;4.22;4.22 -;-;-;-;-;-;-;-;-;- 578 1 2.304 51287.5 1.0 15491 6434 21926 HBL1_DMSO_200M_050219_1,21927 HBL1_DMSO_200M_050219_1,21927,KVFELDLVTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21932 109.32 800.0 167080.0 25 0 17406.0 + -1 GIPSAFLEL 9 118 946.5249200546368 0 946.5270263552666 PEAK CID FTMS 0 0 0 21931 135871.578125 0.6961302795478561 1 -0.022705078125 1 nc|ENSG00000133226|Q8IYB3-2|SRRM1;ENSG00000133226|ENST00000323848|SRRM1 3 {I|L}{I|L}GE{I|L}{M(Oxidation (M))|F}A 7 -1 34.289 0.0 0.0 1.8133 0.0 0.0 963.5181495801736 181.0622194879516 1144.5803690681253 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 {I|L}{I|L}GE{I|L}{M(Oxidation (M))|F}A 1.8133 - 1730 + 1 2.304 95673.1 0.5600000023841858 15492 6438 21931 HBL1_DMSO_200M_050219_1,21932 HBL1_DMSO_200M_050219_1,21932, False False GIPSAFLEL 109.31891 946.527026355267 2622140.5 21931.0 nc|ENSG00000133226|Q8IYB3-2|SRRM1;;ENSG00000133226|ENST00000323848|SRRM1 5.664834658304851 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21933 109.33 347.0 465970.0 25 0 33839.0 + 44376 YLTAEILEL 9 92 1064.587250112004 1063.5799736454042 1 1064.586596667767 MULTI CID FTMS 0 0 0 21931 370702.4375 0.4986286373476547 -24 0.2885208129882812 2 Unmodified _YLTAEILEL_ ENSG00000113648|ENST00000511689|MACROH2A1;ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 112.59319219568356 0.0043923200227745 3 {[QN]|[E{I|L}]|[KN]}ATY{I|L}{I|L}E{I|L} 9 4 + 99.932 0.0 0.0 9.3958 9.3958 93.188 0.0 0.0 0.0 12.614393726401689 16.478174818886373 12.614393726401689 8.138181262758266 0 0.8851518780601924 1.5228787452803376 2.1237125054200234 0.0 {[QN]|[E{I|L}]|[KN]}ATY{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}AT{I|L}Y{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}ATY{I|L}E{I|L}{I|L};[TA]E{I|L}Y{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}AYT{I|L}{I|L}E{I|L};[Y{I|L}]TAE{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}AT{I|L}YE{I|L}{I|L};{[CP]|[EA]}T{I|L}Y{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}A{I|L}TY{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}YAT{I|L}{I|L}E{I|L} 9.3958;8.6306;8.5478;8.2098;8.0562;8.0111;7.7827;7.6982;7.5741;7.4901 -;-;-;-;-;+;-;-;-;- + 5416 1 2.304 106256.3 1.0 15493 6438 21931 HBL1_DMSO_200M_050219_1,21933 HBL1_DMSO_200M_050219_1,21933,YLTAEILEL True True YLTAEILEL 109.32522 1064.58659666777 6843714.0 21931.0 ENSG00000196747|ENST00000358739|H2AC13;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000276903|ENST00000613174|H2AC16;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000274997|ENST00000377459|H2AC12;;nc|ENSG00000113648|O75367-3|MACROH2A1;;ENSG00000184270|ENST00000331128|H2AC21;;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;;ENSG00000113648|ENST00000511689|MACROH2A1;;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;;ENSG00000180573|ENST00000377791|H2AC6;;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;;nc|ENSG00000246705|Q9BTM1-2|H2AJ;;nc|ENSG00000113648|O75367|MACROH2A1;;ENSG00000246705|ENST00000544848|H2AJ 2.684929688771566 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21935 109.33 374.0 214690.0 25 0 23294.0 -1 0 80 966.1189255961252 2895.3349473885755 3 966.4542114138604 MULTI CID FTMS 0 0 0 21934 296886.96875 0.2481272890778457 31 -0.3064117431640625 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 52.573 0.0 0.0 1.8158 0.0 0.0 0.0 1854.7196071850765 1854.7196071850765 20.07662971956117 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8158 - 298 1 2.304 60135.0 1.0 15494 6439 21934 HBL1_DMSO_200M_050219_1,21935 HBL1_DMSO_200M_050219_1,21935, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21936 109.34 289.0 233670.0 25 0 53300.0 + 13692 HQILTPFLL 9 63 541.3238934277002 1080.6332339222004 2 541.3239013552666 MULTI CID FTMS 0 0 0 21934 200058.5 0.6580944095499406 6 -0.0862960815429687 2 Unmodified _HQILTPFLL_ chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS 46.020951573049366 0.0490941689151868 3 [HQ]{I|L}{I|L}TM{I|L}{I|L}{I|L} 9 2 + 56.889 0.0 0.0 5.2644 5.2644 82.653 0.0 0.0 0.0 10.202264589233394 30.94720941673181 10.202264589233394 6.73393743112328 0 1.0924778212679485 0.0 0.8807196863200843 0.3054621874040891 [HQ]{I|L}{I|L}TM{I|L}{I|L}{I|L};[HQ]{I|L}{I|L}M{I|L}T{I|L}{I|L};[HQ]{I|L}{I|L}MT{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[HQ]{I|L}T{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[HQ]T{I|L}{I|L}{I|L};[HQ]{I|L}[VP][YV]{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[HQ]{I|L}T{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[HQ]T{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WK][YV]{I|L}{I|L} 5.2644;4.6413;4.1998;3.3126;2.8711;1.933;1.6248;1.1833;0.85008 -;-;-;-;-;-;-;-;- 189 1 2.304 62151.2 1.0 15495 6439 21934 HBL1_DMSO_200M_050219_1,21936 HBL1_DMSO_200M_050219_1,21936,HQILTPFLL True True HQILTPFLL 109.33982 541.323901355267 2457818.0 21934.0 chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;;nc|ENSG00000119969|Q9NRZ9-3|HELLS;;nc|ENSG00000119969|Q9NRZ9-2|HELLS;;ENSG00000119969|ENST00000348459|HELLS;;nc|ENSG00000119969|Q9NRZ9-4|HELLS 7.544266541798909 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21939 109.36 800.0 81364.0 25 0 3972.9 + 27983 PLYFFTLTRTL 11 90 686.3885772146558 1370.7626014961115 2 686.3886596560478 MULTI CID FTMS 0 0 0 21938 74636.3125 0.7466909106427266 -42 0.5036849975585938 1 Unmodified _PLYFFTLTRTL_ REV__ENSG00000179104|ENST00000321196|TMTC2;REV__ENST00000551915.5_1_12:83081308-83379891:+|nuORF 12.240655878213236 0.7805268987462184 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VNKMV{I|L} 12 -1 + 74.012 0.0 0.0 5.3993 5.3993 81.197 0.0 0.0 0.0 4.771212547196626 9.269608018250594 4.771212547196626 4.771212547196626 0 1.2931576817365436 1.6989700043360187 0.4247425010840047 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VNKMV{I|L};[{I|L}P]D{M(Oxidation (M))|F}[VP]VNKMV{I|L};[{I|L}P]QAKMVEP{M(Oxidation (M))|F}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VE{I|L}MV{I|L};[{I|L}P]D[{I|L}V]MVNKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VGGKMV{I|L};[{I|L}P]QAKMVE{I|L}MV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]AAAKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[QP]{I|L}AKMV{I|L};[{I|L}P]{M(Oxidation (M))|F}D[VP]VNKMV{I|L} 5.3993;5.0512;4.7925;4.7735;4.7414;4.7356;4.7344;4.716;4.6307;4.612 -;-;-;-;-;-;-;-;-;- 3603 1 2.304 54252.6 0.3300000131130218 15496 6441 21938 HBL1_DMSO_200M_050219_1,21939 HBL1_DMSO_200M_050219_1,21939,PLYFFTLTRTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21941 109.37 206.0 617350.0 25 0 94384.0 + 41577 VPPEWVPII 9 83 525.3051953216246 1048.5958377100492 2 525.3052856326103 MULTI CID FTMS 0 0 0 21940 217408.71875 0.1553360046863293 -25 0.2607269287109375 1 Unmodified _VPPEWVPII_ ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 50.855029805455786 0.0384952370514206 3 [{I|L}P][DP]WVP{I|L}{I|L} 9 2 + 68.478 0.0 0.0 6.5305 6.5305 60.715 0.0 0.0 0.0 4.259687322722812 16.478174818886373 4.259687322722812 0.0 0 0.8807196863200843 2.0 0.3807196863200844 0.0 [{I|L}P][DP]WVP{I|L}{I|L};[{I|L}P][WD]PVP{I|L}{I|L};[WE]PPVVP{I|L}{I|L};[EP]WPVVP{I|L}{I|L};[WE]PVPVP{I|L}{I|L};[EP]WVPVP{I|L}{I|L};[EP]PWVVP{I|L}{I|L};[VP][WE]PVP{I|L}{I|L};[VP][EP]WVP{I|L}{I|L};{[HG]|PP}EWVVP{I|L}{I|L} 6.5305;6.5305;6.1242;6.0318;5.8371;5.7447;5.7447;5.6959;5.6959;5.6054 -;-;-;-;-;-;-;-;+;- + 659 1 2.304 120589.6 1.0 15497 6442 21940 HBL1_DMSO_200M_050219_1,21941 HBL1_DMSO_200M_050219_1,21941,VPPEWVPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21944 109.39 800.0 146200.0 25 0 17704.0 + 11520 GIPDYFDIV 9 84 1038.514522654062 1037.507246187462 1 1038.761401355267 MULTI CID FTMS 0 0 0 21943 126687.25 0.1961228553918604 -41 0.4976119995117187 1 Unmodified _GIPDYFDIV_ ENSG00000005339|ENST00000262367|CREBBP;ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;nc|ENSG00000005339|Q92793-2|CREBBP 54.773552608820026 0.0299037012502309 3 [DP]Y{M(Oxidation (M))|F}D{I|L}G{I|L}V 9 4 + 87.775 0.0 0.0 8.4601 8.4601 95.177 0.0 0.0 0.0 16.989700043360187 16.478174818886373 16.478174818886373 11.366356658695324 0 0.2887254899964357 1.2218487496163564 1.5044321917401078 0.0 [DP]Y{M(Oxidation (M))|F}D{I|L}G{I|L}V;[DP]Y{M(Oxidation (M))|F}G{I|L}D{I|L}V;[DP]Y{M(Oxidation (M))|F}D{I|L}VAV;[DP]YG{I|L}{M(Oxidation (M))|F}D{I|L}V;[DP]YG{M(Oxidation (M))|F}{I|L}D{I|L}V;[Y{M(Oxidation (M))|F}]DPD{I|L}G{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}G{I|L}V;[Y{M(Oxidation (M))|F}]DPG{I|L}D{I|L}V;[DP]Y{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}G{I|L}V;[Y{M(Oxidation (M))|F}]DPD{I|L}VAV 8.4601;7.3646;7.2346;7.1078;7.0745;6.8226;6.6088;5.7271;5.7191;5.5971 -;-;-;-;-;-;-;-;-;- 1247 1 2.304 78778.3 0.9200000166893004 15498 6444 21943 HBL1_DMSO_200M_050219_1,21944 HBL1_DMSO_200M_050219_1,21944,GIPDYFDIV True True GIPDYFDIV 109.38674 1038.76140135527 20044573.5 21943.0 EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;;ENSG00000005339|ENST00000262367|CREBBP;;nc|ENSG00000005339|Q92793-2|CREBBP;;ENSG00000100393|ENST00000263253|EP300 4.107271909713745 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21945 109.4 624.0 26365.0 25 0 3736.1 -1 0 34 1014.605813105336 0 1014.601733386517 PEAK CID FTMS 0 0 0 21943 349300.75 0.8188830917517648 1 -0.0411834716796875 2 3 {I|L}E{I|L}{I|L}AT 6 -1 38.136 0.0 0.0 1.8812 0.0 0.0 1144.6928140995406 239.1041201227172 1383.7969342222575 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {I|L}E{I|L}{I|L}AT 1.8812 - 225 + 1 2.304 21481.8 1.0 15499 6444 21943 HBL1_DMSO_200M_050219_1,21945 HBL1_DMSO_200M_050219_1,21945, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21946 109.41 800.0 124330.0 25 0 15833.0 + 39423 VALPALINI 9 79 923.5926913803864 922.5854149137864 1 923.5967895388604 MULTI CID FTMS 0 0 0 21943 142838.46875 1.0 0 0.0 3 Unmodified _VALPALINI_ ENSG00000153561|ENST00000283632|RMND5A 77.98433622928108 0.0180125044636492 3 [PA]{I|L}{I|L}G{I|L}{I|L}N{I|L} 9 3 + 66.155 0.0 0.0 7.1706 7.1706 86.667 0.0 0.0 0.0 10.579919469776868 13.212112250009652 10.579919469776868 4.771212547196626 0 0.9049471895720984 0.8538719643217619 0.0 0.3494850021680094 [PA]{I|L}{I|L}G{I|L}{I|L}N{I|L};[PA]{I|L}VA{I|L}{I|L}N{I|L};[PA]{I|L}{I|L}AV{I|L}N{I|L};[PA]{I|L}AV{I|L}{I|L}N{I|L};[PA]{I|L}G{I|L}{I|L}{I|L}N{I|L};[PA]{I|L}{I|L}VA{I|L}N{I|L};{[VA]|[{I|L}G]}{I|L}PA{I|L}{I|L}N{I|L};[PA]{I|L}{I|L}{I|L}G{I|L}N{I|L};[PA]{I|L}A{I|L}V{I|L}N{I|L};[PA]{I|L}{I|L}A{I|L}VN{I|L} 7.1706;6.6534;6.5733;6.518;6.2546;6.0562;6.0238;5.9836;5.9208;5.9159 -;-;-;-;-;-;+;-;-;- + 1949 1 2.304 71320.9 0.8799999952316284 15500 6444 21943 HBL1_DMSO_200M_050219_1,21946 HBL1_DMSO_200M_050219_1,21946,VALPALINI True True VALPALINI 109.41152 923.59678953886 1412608.125 21943.0 ENSG00000153561|ENST00000283632|RMND5A 3.807446320851644 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21948 109.43 800.0 138570.0 25 0 12622.0 + 42667 VTVQSLLTV 9 91 959.5776787141672 958.5704022475672 1 959.5796996951104 MULTI CID FTMS 0 0 0 21947 104449.1484375 0.7957644790305993 7 -0.08587646484375 1 Unmodified _VTVQSLLTV_ ENSG00000182578|ENST00000675795|CSF1R 118.89474601620944 0.0019711750475752 3 {[TV]|[{I|L}S]}N{I|L}S{I|L}{I|L}TV 9 2 + 114.26 0.0 0.0 11.92 11.92 87.673 0.0 0.0 0.0 4.771212547196626 16.478174818886373 4.771212547196626 2.768024924119672 0 0.5484550065040282 1.3010299956639813 2.305462187404089 1.809894379144197 {[TV]|[{I|L}S]}N{I|L}S{I|L}{I|L}TV;{[TV]|[{I|L}S]}{I|L}NS{I|L}{I|L}TV;{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}S{I|L}{I|L}TV;{[TV]|[{I|L}S]}N{I|L}{I|L}S{I|L}TV;{[TV]|[{I|L}S]}{I|L}N{I|L}S{I|L}TV;{[TV]|[{I|L}S]}N{I|L}TV{I|L}TV;{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}{I|L}S{I|L}TV;{[TV]|[{I|L}S]}{I|L}SN{I|L}{I|L}TV;{[TV]|[{I|L}S]}{I|L}NTV{I|L}TV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SS{I|L}{I|L}TV 11.92;11.631;11.422;11.146;10.857;10.785;10.648;10.637;10.496;10.455 -;-;-;-;-;-;-;-;-;- 2667 1 2.304 77514.1 0.4199999868869781 15501 6445 21947 HBL1_DMSO_200M_050219_1,21948 HBL1_DMSO_200M_050219_1,21948,VTVQSLLTV True True SIISNLITV 109.42925 959.57969969511 1095034.5 21947.0 ENSG00000132953|ENST00000255305|XPO4 2.668592340623339 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21949 109.44 472.0 95343.0 25 0 9182.7 + 22555 LPWQIVQI 8 66 498.7977747272403 995.5809965212808 2 498.7980224490166 MULTI CID FTMS 0 0 0 21947 97717.9453125 0.7986470266499239 -14 0.1519546508789062 2 Unmodified _LPWQIVQI_ ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF;ENST00000540987.1_1_12:133225370-133225942:-|nuORF 40.44857923139169 0.2267865117615937 3 [WP]Q{I|L}{I|L}VQ{I|L} 8 2 + 47.77 0.0 0.0 4.7982 4.7982 76.625 0.0 0.0 0.0 6.100289209992376 10.172203223519531 6.100289209992376 3.0102999566398125 0 0.6677353201839438 1.0457574905606752 0.0 0.0 [WP]Q{I|L}{I|L}VQ{I|L};[WP]{I|L}Q{I|L}VQ{I|L};[WP]Q{I|L}V{I|L}Q{I|L};[WP]{I|L}QV{I|L}Q{I|L};[{I|L}P]WQ{I|L}VQ{I|L};[{I|L}P]WQV{I|L}Q{I|L};[WP][AG]{I|L}{I|L}VQ{I|L};[WQ]P{I|L}{I|L}VQ{I|L};[WP][AG]{I|L}V{I|L}Q{I|L};[WP]{I|L}[AG]{I|L}VQ{I|L} 4.7982;4.4958;4.4958;4.1934;4.1854;3.8831;3.8679;3.7478;3.5655;3.5655 -;-;-;-;+;-;-;-;-;- + 202 1 2.304 43330.3 1.0 15502 6445 21947 HBL1_DMSO_200M_050219_1,21949 HBL1_DMSO_200M_050219_1,21949,LPWQIVQI False True LPWQIVQI 109.4376 498.798022449017 962280.875 21947.0 ENSG00000177084|ENST00000320574|POLE;;ENST00000537064.5_1_12:133201285-133234573:-|nuORF;;ENST00000540987.1_1_12:133225370-133225942:-|nuORF 4.33339277903239 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21950 109.45 800.0 66040.0 25 0 8894.7 + 42778 VVINFDFPKL 10 70 596.3423110185328 1190.6700691038654 2 596.3425170779228 MULTI CID FTMS 0 0 0 21947 83205.7890625 0.4914069744704487 15 -0.1427993774414062 3 Unmodified _VVINFDFPKL_ ENSG00000110367|ENST00000534980|DDX6 32.037481411007896 0.2488723560272515 3 VV{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F}P[K{I|L}] 10 0 + 89.641 0.0 0.0 7.5286 7.5286 91.716 0.0 0.0 0.0 73.69911285071794 5.764837301042718 5.764837301042718 9.164539485499262 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + + VV{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F}P[K{I|L}];VV{I|L}GG{M(Oxidation (M))|F}D{M(Oxidation (M))|F}P[K{I|L}] 7.5286;6.7589 +;- + 129 + 1 2.304 45039.3 0.3199999928474426 15503 6445 21947 HBL1_DMSO_200M_050219_1,21950 HBL1_DMSO_200M_050219_1,21950,VVINFDFPKL False True VVINFDFPKL 109.45143 596.342517077923 2578157.0 21947.0 ENSG00000110367|ENST00000534980|DDX6 10.357363065083822 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21955 109.48 800.0 59481.0 25 0 4537.0 + -1 DAMSILETI 9 77 992.4998582964596 0 992.489794909954 PEAK CID FTMS 0 0 0 21954 45768.46875 1.0 0 0.0 1 ENSG00000038219|ENST00000040738|BOD1L1 3 {I|L}{I|L}{I|L}{I|L}SM 6 -1 39.488 0.0 0.0 1.9913 0.0 0.0 1126.5177086810068 183.0422457330688 1309.5599544140755 0.0 0.0 0.0 0.0 0 0.0 0.0 1.674742501084005 0.0 {I|L}{I|L}{I|L}{I|L}SM 1.9913 - 802 + 1 2.304 39259.9 0.3400000035762787 15504 6449 21954 HBL1_DMSO_200M_050219_1,21955 HBL1_DMSO_200M_050219_1,21955, False False DAMSILETI 109.47984 992.489794909954 2436684.25 21954.0 ENSG00000038219|ENST00000040738|BOD1L1 3.292325417200724 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21958 109.5 625.0 354300.0 25 0 44762.0 + 11521 GIPDYFDIV 9 90 1038.514522654062 1037.507246187462 1 1038.515185534954 MULTI CID FTMS 0 0 0 21957 188583.359375 0.29194340330234 -34 0.3843612670898437 1 Unmodified _GIPDYFDIV_ ENSG00000005339|ENST00000262367|CREBBP;ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;nc|ENSG00000005339|Q92793-2|CREBBP 71.13359017698441 0.0206607516130725 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}G{I|L}V 9 5 + 82.362 0.0 0.0 7.9384 7.9384 89.88 0.0 0.0 0.0 6.197887582883936 11.276362525516532 6.197887582883936 6.197887582883936 0 0.3494850021680094 1.0969100130080565 1.5044321917401078 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}G{I|L}V;[DP]Y{M(Oxidation (M))|F}D{I|L}G{I|L}V;[Y{M(Oxidation (M))|F}]DPD{I|L}G{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}DG{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}GV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}VAV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}G{I|L}D{I|L}V;[DP]Y{M(Oxidation (M))|F}DG{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}G{I|L}{M(Oxidation (M))|F}D{I|L}V;[DP]Y{M(Oxidation (M))|F}D{I|L}GV{I|L} 7.9384;7.341;7.0509;6.916;6.8515;6.6543;6.393;6.3186;6.2606;6.2542 -;-;-;-;-;-;-;-;-;- 3026 1 2.304 143353.2 1.0 15505 6451 21957 HBL1_DMSO_200M_050219_1,21958 HBL1_DMSO_200M_050219_1,21958,GIPDYFDIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21961 109.52 800.0 54054.0 25 0 4871.0 + 28619 PVFGYTQYI 9 59 544.2789016232654 0 544.2784911990166 PEAK CID FTMS 0 0 0 21960 57667.46875 0.6594162853427056 1 -0.0163650512695312 1 Unmodified _PVFGYTQYI_ REV__ENSG00000155304|ENST00000285667|HSPA13 11.640296217721598 0.2934555500198502 3 Y 1 -1 6.9897 0.0 0.0 0.6433 0.0 0.0 838.3904315650869 82.0669420831664 920.4573736482532 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.6433 + + 19 + 1 2.304 40713.4 0.3400000035762787 15506 6453 21960 HBL1_DMSO_200M_050219_1,21961 HBL1_DMSO_200M_050219_1,21961,PVFGYTQYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_1 21966 109.55 800.0 50129.0 25 0 4760.0 -1 0 51 724.840963730365 2895.33474905506 4 725.0928832888603 MULTI CID FTMS 0 0 0 21965 40095.26953125 0.3200507434568099 17 -0.117919921875 1 3 [H{I|L}]VEA{I|L}Y{I|L}D 9 -1 58.338 0.0 0.0 2.0149 0.0 0.0 0.0 1838.773444693985 1838.773444693985 35.94212497064703 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}D 2.0149 - 167 1 2.304 40704.4 0.7699999809265137 15507 6457 21965 HBL1_DMSO_200M_050219_1,21966 HBL1_DMSO_200M_050219_1,21966, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21972 109.58 673.0 179370.0 25 0 15243.0 + 42051 VQVEDIVFL 9 93 1061.587032516701 1060.5797560501007 1 1061.588061511517 MULTI CID FTMS 0 0 0 21971 103724.3125 0.965971133446965 1 -0.0142822265625 1 Unmodified _VQVEDIVFL_ ENSG00000197780|ENST00000338366|TAF13 88.95385435242217 0.0153473310052057 3 {[QV]|[N{I|L}]|[RA]|[KV]}ED{I|L}VV{M(Oxidation (M))|F}{I|L} 9 2 + 100.83 0.0 0.0 9.5072 9.5072 84.613 0.0 0.0 0.0 15.228787452803374 16.478174818886373 15.228787452803374 1.0957561683650283 0 0.3807196863200844 1.2218487496163564 1.8620155761587909 1.9353167406967968 {[QV]|[N{I|L}]|[RA]|[KV]}ED{I|L}VV{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EDV{I|L}V{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EVEVV{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EVD{I|L}V{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VEEVV{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VED{I|L}V{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EVVEV{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}ED{I|L}V{M(Oxidation (M))|F}V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EDVV{I|L}{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EDV{I|L}{M(Oxidation (M))|F}V{I|L} 9.5072;9.4039;9.1399;9.0366;8.9513;8.848;8.5523;8.4897;8.4839;8.3864 -;-;-;-;-;+;-;-;-;- + 8284 1 2.304 84617.8 1.0 15508 6462 21971 HBL1_DMSO_200M_050219_1,21972 HBL1_DMSO_200M_050219_1,21972,VQVEDIVFL True True VQVEDIVFL 109.57672 1061.58806151152 905476.875 21971.0 ENSG00000197780|ENST00000338366|TAF13 3.699751138687134 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21975 109.6 800.0 104560.0 25 0 10178.0 -1 0 90 966.1189255961252 2895.3349473885755 3 966.4554931521416 MULTI CID FTMS 0 0 0 21974 129131.84375 0.1079236803764613 56 1 3 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 52.573 0.0 0.0 1.8158 0.0 0.0 0.0 1854.718029981757 1854.718029981757 29.51335651524652 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8158 - 444 1 2.304 61399.9 0.8199999928474426 15509 6464 21974 HBL1_DMSO_200M_050219_1,21975 HBL1_DMSO_200M_050219_1,21975, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21981 109.62 36.0 1293900.0 25 0 193610.0 + 41578 VPPEWVPII 9 51 525.3051953216246 1048.5958377100492 2 525.3053466677666 MULTI CID FTMS 0 0 0 21980 1345981.875 0.9616884182236336 2 -0.0226669311523437 1 Unmodified _VPPEWVPII_ ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 30.22481116460888 0.1466181017706357 3 [{I|L}P][WD]PVP{I|L}{I|L} 9 4 + 51.801 0.0 0.0 4.94 4.94 78.877 0.0 0.0 0.0 4.259687322722812 10.330145895351848 4.259687322722812 4.259687322722812 0 1.1677353201839438 2.0 0.0 0.0 [{I|L}P][WD]PVP{I|L}{I|L};[WE]PPVVP{I|L}{I|L};[EP]WPVVP{I|L}{I|L};[WE]PVPVP{I|L}{I|L};[EP]WVPVP{I|L}{I|L};[EP]PWVVP{I|L}{I|L};[VP][WE]PVP{I|L}{I|L} 4.94;4.5338;4.3658;4.2467;4.0788;4.0788;3.7429 -;-;-;-;-;-;- 108 1 2.304 47765.1 1.0 15510 6469 21980 HBL1_DMSO_200M_050219_1,21981 HBL1_DMSO_200M_050219_1,21981,VPPEWVPII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21982 109.63 800.0 82677.0 25 0 10807.0 41346 VPIYAAYKF 9 82 536.296262829659 1070.577972726118 2 536.2960693240166 MULTI CID FTMS 0 0 0 21980 116600.0390625 0.917421179889742 1 -0.0186080932617187 2 Unmodified _VPIYAAYKF_ ENSG00000142319|ENST00000270349|SLC6A3 16.942295170755138 0.3780752226737986 3 VPPE{I|L}[WY]T 8 6 54.831 0.0 0.0 5.1216 0.0 0.0 0.0 82.06694971256093 82.06694971256093 42.356537694451575 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5 0.0 VPPE{I|L}[WY]T 5.1216 - 74 + 1 2.304 61344.7 0.4199999868869781 15511 6469 21980 HBL1_DMSO_200M_050219_1,21982 HBL1_DMSO_200M_050219_1,21982,VPIYAAYKF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21988 109.66 800.0 97913.0 25 0 3997.2 + 1524 ALISFFDAA 9 89 954.4918597469094 953.4845832803094 1 954.4900390505792 MULTI CID FTMS 0 0 0 21987 59061.93359375 0.6397995258667674 -14 0.0934295654296875 1 Unmodified _ALISFFDAA_ ENSG00000138686|ENST00000264499|BBS7 133.70201269244603 0.0112873236905593 3 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{M(Oxidation (M))|F}{I|L}DAA 9 4 + 83.497 0.0 0.0 8.757 8.757 88.715 0.0 0.0 0.0 22.3284972689858 28.02809901047091 22.3284972689858 4.00560227418346 0 0.3494850021680094 1.6989700043360187 2.3169015600442577 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{M(Oxidation (M))|F}{I|L}DAA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{I|L}{M(Oxidation (M))|F}DAA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{M(Oxidation (M))|F}{I|L}{I|L}DAA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{M(Oxidation (M))|F}DA{I|L}A;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{M(Oxidation (M))|F}{I|L}WA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}A{I|L}{I|L}DAA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{M(Oxidation (M))|F}W{I|L}A;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{M(Oxidation (M))|F}D{I|L}AA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{M(Oxidation (M))|F}{I|L}DA{I|L}A;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{I|L}{M(Oxidation (M))|F}WA 8.757;8.3369;8.2834;8.1791;8.0729;7.9321;7.8107;7.7383;7.7055;7.6528 -;-;-;-;-;-;-;-;-;- 2102 1 2.304 57402.9 0.3799999952316284 15512 6474 21987 HBL1_DMSO_200M_050219_1,21988 HBL1_DMSO_200M_050219_1,21988,ALISFFDAA True False ALISFFDAA 109.66414 954.490039050579 1191605.125 21987.0 ENSG00000138686|ENST00000264499|BBS7 6.916066805521647 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 21989 109.68 800.0 64219.0 25 0 12134.0 -1 0 60 975.2711363565472 0 975.2725707888604 PEAK CID FTMS 0 0 0 21987 70424.046875 1.0 0 0.0 2 3 VS{I|L}V{I|L} 5 -1 25.433 0.0 0.0 1.3052 0.0 0.0 991.9472887269628 442.2192476861938 1434.1665364131568 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 VS{I|L}V{I|L} 1.3052 - 147 + 1 2.304 42820.6 0.8500000238418579 15513 6474 21987 HBL1_DMSO_200M_050219_1,21989 HBL1_DMSO_200M_050219_1,21989, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 21999 109.72 519.0 178550.0 25 0 28288.0 + 43708 YAYPGVLLI 9 73 1008.5773589095996 1007.5700824429996 1 1008.57823485136 MULTI CID FTMS 0 0 0 21998 83955.1328125 0.2072252466434401 39 1 Unmodified _YAYPGVLLI_ ENSG00000100412|ENST00000216254|ACO2;ENST00000478010.1_1_22:41904038-41912046:+|nuORF 36.46614268402704 0.0948557732959553 3 YAY{I|L}{I|L}{I|L} 6 3 35.126 0.0 0.0 3.4862 0.0 0.0 253.14332778144689 0.0 253.14332778144689 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 YAY{I|L}{I|L}{I|L} 3.4862 - 382 1 2.304 67790.4 1.0 15514 6483 21998 HBL1_DMSO_200M_050219_1,21999 HBL1_DMSO_200M_050219_1,21999,YAYPGVLLI True True YAYPGVLLI 109.7206 1008.57823485136 3492063.0 21998.0 ENSG00000100412|ENST00000216254|ACO2;;ENST00000478010.1_1_22:41904038-41912046:+|nuORF 4.7072679201761884 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 22000 109.73 800.0 73702.0 25 0 3870.4 + + -1 FPLDPQLAKMVI 12 76 686.3885772146558 1370.7626014961115 2 686.3895141482353 MULTI CID FTMS 0 0 0 21998 99956.1015625 1.0 0 0.0 2 Oxidation (M) _PIKM(Oxidation (M))IIQWDVI_ ENSG00000109606|ENST00000336812|DHX15;ENST00000503562.1_1_4:24541777-24541846:-|nuORF;ENST00000503562.1_1_4:24541566-24543501:-|nuORF 13.90604991867851 0.7458848613461305 3 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VNKMV{I|L} 12 -1 + 76.925 0.0 0.0 5.6118 5.6118 80.129 0.0 0.0 0.0 8.507112333562858 6.884001744652281 6.884001744652281 3.3891076255521853 0 1.6624379954164592 2.0 1.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VNKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[QP]{I|L}AKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VE{I|L}MV{I|L};[{I|L}P]D{M(Oxidation (M))|F}[VP]VNKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]AAAKMV{I|L};[{I|L}P]{M(Oxidation (M))|F}D[VP]VNKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VGGKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DVVPNKMV{I|L};[{I|L}P]D{M(Oxidation (M))|F}[QP]{I|L}AKMV{I|L};[{I|L}P]{M(Oxidation (M))|F}D[QP]{I|L}AKMV{I|L} 5.6118;5.3646;5.0265;4.9912;4.9835;4.953;4.9481;4.8079;4.744;4.7058 -;-;-;-;-;-;-;-;-;- 1792 1 2.304 49279.0 0.4699999988079071 15515 6483 21998 HBL1_DMSO_200M_050219_1,22000 HBL1_DMSO_200M_050219_1,22000,PIKMIIQWDVI False False FPLDPQLAKMVI 109.73443 686.389514148235 4678915.5 21998.0 ENSG00000109606|ENST00000336812|DHX15;;ENST00000503562.1_1_4:24541777-24541846:-|nuORF;;ENST00000503562.1_1_4:24541566-24543501:-|nuORF 6.073302745819092 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 22001 109.75 800.0 16109.0 25 0 1058.2 -1 0 36 1166.9771567622497 0 1167.175341784954 PEAK CID FTMS 0 0 0 -1 0 3 3 P 1 -1 1.9897 0.0 0.0 0.085324 0.0 0.0 1043.290909128212 1188.5954073541627 2231.8863164823747 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.085324 - 2 + 1 2.304 18978.9 0.5099999904632568 15516 6483 21998 HBL1_DMSO_200M_050219_1,22001 HBL1_DMSO_200M_050219_1,22001, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22004 109.77 800.0 184550.0 25 0 24781.0 + 44243 YLIPDIDLKL 10 81 601.8553834831756 1201.6962140331511 2 601.8550292849541 MULTI CID FTMS 0 0 0 22003 76364.1796875 0.327818532098572 -6 0.0582809448242187 1 Unmodified _YLIPDIDLKL_ ENSG00000173473|ENST00000254480|SMARCC1 51.76506608216692 0.0697913821149828 3 Y{I|L}{I|L}PD{I|L}D{I|L}K{I|L} 10 0 + 87.064 0.0 0.0 7.2451 7.2451 92.638 0.0 0.0 0.0 36.938200260161125 10.0 10.0 10.740312677277188 0 0.8252574989159953 1.6989700043360187 1.174742501084005 0.0 + + Y{I|L}{I|L}PD{I|L}D{I|L}K{I|L};Y{I|L}{I|L}{I|L}[DP]D{I|L}K{I|L} 7.2451;6.3513 +;- + 419 + 1 2.304 111535.0 0.4699999988079071 15517 6485 22003 HBL1_DMSO_200M_050219_1,22004 HBL1_DMSO_200M_050219_1,22004,YLIPDIDLKL True True YLIPDIDLKL 109.76825 601.855029284954 2148937.75 22003.0 ENSG00000173473|ENST00000254480|SMARCC1 3.245708783467611 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 22005 109.77 364.0 23284.0 25 0 3493.3 -1 0 26 818.2205688357353 0 818.2205688357353 PEAK CID FTMS 0 0 0 -1 0 2 3 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.304 15585.0 1.0 15518 6485 22003 HBL1_DMSO_200M_050219_1,22005 HBL1_DMSO_200M_050219_1,22005, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22008 109.79 800.0 36178.0 25 0 854.3 -1 0 66 1149.296295056857 0 1149.296191394329 PEAK CID FTMS 0 0 0 22007 27319.455078125 0.2388003752636566 1 -0.0573272705078125 1 3 R 1 -1 0.48455 0.0 0.0 0.021099 0.0 0.0 1063.2797716549264 1074.1664522760375 2137.446223930964 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.021099 - 5 + 1 2.304 25720.8 0.6299999952316284 15519 6487 22007 HBL1_DMSO_200M_050219_1,22008 HBL1_DMSO_200M_050219_1,22008, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22009 109.81 800.0 131340.0 25 0 18739.0 + 32551 SAPTLFPLV 9 95 472.7763475527768 943.5381421723536 2 472.7765380740166 MULTI CID FTMS 0 0 0 22007 93141.0 0.1700968974861714 -8 0.0846023559570312 2 Unmodified _SAPTLFPLV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 63.562846038646086 0.0241094678104353 3 [{I|L}P]{M(Oxidation (M))|F}TP{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 6 + 51.348 0.0 0.0 5.4421 5.4421 80.536 0.0 0.0 0.0 10.725351633084642 15.132717555561456 10.725351633084642 4.202854896797192 0 0.0 2.0 0.5941876774005248 0.0 [{I|L}P]{M(Oxidation (M))|F}TP{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]TP{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[TP]{M(Oxidation (M))|F}{I|L}P{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TP{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}P{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]TP{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}[KA]TP{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[TP]{I|L}P{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]T{[SA]|[TG]}[KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[TP]{I|L}P{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.4421;4.9966;4.0423;4.0407;3.9568;3.9055;3.8223;3.6808;2.7712;2.5896 -;-;-;-;-;-;-;-;-;- 577 1 2.304 83310.0 0.5400000214576721 15520 6487 22007 HBL1_DMSO_200M_050219_1,22009 HBL1_DMSO_200M_050219_1,22009,SAPTLFPLV True True SAPTLFPLV 109.8084 472.776538074017 3653466.0 22007.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 1.653227766354879 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_1 22010 109.82 800.0 34840.0 25 0 3571.8 -1 0 65 1163.779356500552 0 1164.068774402142 PEAK CID FTMS 0 0 0 22007 36517.98046875 0.1059418314869275 -6 0.0770339965820312 3 3 {I|L} 1 -1 5.4846 0.0 0.0 0.23584 0.0 0.0 1602.1049643665351 607.3436983697874 2209.4486627363226 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.23584 - 16 + 1 2.304 25612.1 0.5799999833106995 15521 6487 22007 HBL1_DMSO_200M_050219_1,22010 HBL1_DMSO_200M_050219_1,22010, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22011 109.84 800.0 61399.0 25 0 5569.2 -1 0 75 1155.133959949017 0 1155.133959949017 PEAK CID FTMS 0 0 0 -1 0 4 3 M 1 -1 3.4949 0.0 0.0 0.15141 0.0 0.0 1453.7672352283091 720.4170931695178 2174.184328397827 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.15141 - 6 + 1 2.304 37102.8 0.5799999833106995 15522 6487 22007 HBL1_DMSO_200M_050219_1,22011 HBL1_DMSO_200M_050219_1,22011, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22014 109.86 711.0 119980.0 25 0 2052.5 -1 0 108 1090.458544909954 0 1090.458544909954 PEAK CID FTMS 0 0 0 -1 0 1 3 {I|L}VKWD 5 -1 20.433 0.0 0.0 0.93777 0.0 0.0 1117.3728538624605 417.1567782037719 1534.5296320662324 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VKWD 0.93777 - 122 + 1 2.289 52828.1 1.0 15523 6489 22013 HBL1_DMSO_200M_050219_1,22014 HBL1_DMSO_200M_050219_1,22014, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22015 109.87 787.0 48322.0 25 0 1732.4 -1 0 83 1123.980761706829 0 1123.980761706829 PEAK CID FTMS 0 0 0 -1 0 2 3 {I|L}Q 2 -1 7.0783 0.0 0.0 0.31516 0.0 0.0 1522.5064930408082 479.2754610651001 2001.781954105908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Q 0.31516 - 18 + 1 2.289 31275.6 1.0 15524 6489 22013 HBL1_DMSO_200M_050219_1,22015 HBL1_DMSO_200M_050219_1,22015, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22017 109.87 54.0 1042700.0 25 0 164410.0 + 41579 VPPEWVPII 9 61 525.3051953216246 1048.5958377100492 2 525.3053466677666 MULTI CID FTMS 0 0 0 22016 935074.625 0.6680999601404791 23 1 Unmodified _VPPEWVPII_ ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 23.1484247019978 0.2366544122328345 3 [{I|L}P][DP]WV 6 5 31.655 0.0 0.0 3.0188 0.0 0.0 0.0 338.2061049373695 338.2061049373695 15.51152522447381 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}P][DP]WV 3.0188 - 136 1 2.289 55445.9 1.0 15525 6490 22016 HBL1_DMSO_200M_050219_1,22017 HBL1_DMSO_200M_050219_1,22017,VPPEWVPII False True VPPEWVPII 109.87474 525.305346667767 95227464.0 22016.0 nc|ENSG00000204463|P46379-5|BAG6;;nc|ENSG00000204463|P46379-2|BAG6;;nc|ENSG00000204463|P46379|BAG6;;ENSG00000204463|ENST00000676615|BAG6 3.6926382382710776 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 22019 109.89 800.0 68269.0 25 0 9863.0 41347 VPIYAAYKF 9 56 536.2969200664342 1070.5792871996682 2 536.2964355349541 MULTI CID FTMS 0 0 0 22018 54457.56640625 0.6534889385158311 1 -0.0194473266601562 1 Unmodified _VPIYAAYKF_ ENSG00000142319|ENST00000270349|SLC6A3 16.942295170755138 0.3780752226737986 3 VPPE 4 7 51.414 0.0 0.0 4.8025 0.0 0.0 0.0 645.3407043576431 645.3407043576431 38.31546893236258 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VPPE 4.8025 - 31 + 1 2.289 54160.5 0.3300000131130218 15526 6491 22018 HBL1_DMSO_200M_050219_1,22019 HBL1_DMSO_200M_050219_1,22019,VPIYAAYKF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 22020 109.89 189.0 1005200.0 25 0 132670.0 + 11522 GIPDYFDIV 9 98 1038.514522654062 1037.507246187462 1 1038.512622058392 MULTI CID FTMS 0 0 0 22018 387998.71875 0.6006556824750192 6 2 Unmodified _GIPDYFDIV_ ENSG00000005339|ENST00000262367|CREBBP;ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;nc|ENSG00000005339|Q92793-2|CREBBP 71.13359017698441 0.0206607516130725 3 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}G{I|L}V 9 5 + 80.913 0.0 0.0 7.7988 7.7988 87.774 0.0 0.0 0.0 4.436974992327123 13.494850021680094 4.436974992327123 4.436974992327123 0 0.3807196863200844 1.0457574905606752 1.5044321917401078 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}G{I|L}V;[DP]Y{M(Oxidation (M))|F}D{I|L}G{I|L}V;[Y{M(Oxidation (M))|F}]DPD{I|L}G{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}MYD{I|L}G{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}DG{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}G{I|L}{M(Oxidation (M))|F}D{I|L}V;{[{M(Oxidation (M))|F}D]|MM}YPD{I|L}G{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}GV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{I|L}VAV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}G{I|L}D{I|L}V 7.7988;7.3711;7.081;6.879;6.8698;6.8188;6.5566;6.4981;6.4846;6.4723 -;-;-;-;-;-;-;-;-;- 4388 1 2.289 123224.4 1.0 15527 6491 22018 HBL1_DMSO_200M_050219_1,22020 HBL1_DMSO_200M_050219_1,22020,GIPDYFDIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 22022 109.91 800.0 171160.0 25 0 2540.7 -1 0 122 1099.7277036182093 0 1099.451464831829 PEAK CID FTMS 0 0 0 -1 0 1 3 {I|L}VK 3 -1 14.693 0.0 0.0 0.66863 0.0 0.0 1135.9078327645832 718.2622041383996 1854.1700369029827 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VK 0.66863 - 755 + 1 2.268 79541.6 0.9300000071525574 15528 6492 22021 HBL1_DMSO_200M_050219_1,22022 HBL1_DMSO_200M_050219_1,22022, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22024 109.93 800.0 67103.0 25 0 6233.0 -1 0 94 989.0463220070928 0 988.7454711794852 PEAK CID FTMS 0 0 0 -1 0 1 3 {I|L}VKWD 5 -1 13.32 0.0 0.0 0.67408 0.0 0.0 914.5409339538354 417.15741907291255 1331.698353026748 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 {I|L}VKWD 0.67408 - 232 + 1 2.268 43337.0 0.3799999952316284 15529 6493 22023 HBL1_DMSO_200M_050219_1,22024 HBL1_DMSO_200M_050219_1,22024, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22025 109.94 800.0 48703.0 25 0 4619.5 32548 SAPPSLAGPAV 11 74 483.7665044122092 0 483.7643310427666 PEAK CID FTMS 0 0 0 22023 71597.6484375 1.0 0 0.0 2 Unmodified _SAPPSLAGPAV_ ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP 17.11289562659939 0.3845757490720307 3 PT{I|L} 3 9 14.609 0.0 0.0 1.5131 0.0 0.0 158.06627906649436 493.24433313541255 651.3106122019069 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 PT{I|L} 1.5131 - 44 + 1 2.268 33748.9 0.3400000035762787 15530 6493 22023 HBL1_DMSO_200M_050219_1,22025 HBL1_DMSO_200M_050219_1,22025,SAPPSLAGPAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_1 22027 109.95 142.0 1720900.0 25 0 1075100.0 13486 HLVQHPHV 8 43 966.5277528795702 965.5204764129702 1 966.526416003704 MULTI CID FTMS 0 0 0 22026 599725.1875 0.5638156953840292 1 -0.0309906005859375 1 Unmodified _HLVQHPHV_ chrX:65524262-65524585|13|21.23|0.33|6.02|-|2|TE_info:MIR3,MIR3_dup48760,MIR,SINE,donor,+,65524585,65524675|LAS1L,None|3 10.183394434864962 0.7604730176254005 3 [H{I|L}]V 3 5 22.051 0.0 0.0 2.2839 0.0 0.0 0.0 613.2844589171295 613.2844589171295 5.597718523607966 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + [H{I|L}]V 2.2839 + + 22 1 2.268 166913.8 1.0 15531 6494 22026 HBL1_DMSO_200M_050219_1,22027 HBL1_DMSO_200M_050219_1,22027,HLVQHPHV False False False False TE_chimeric_transcript PXD020620_cell_line HBL1_DMSO_200M_050219_1 22028 109.96 664.0 84119.0 25 0 5920.4 -1 0 105 1045.464504548882 0 1045.905566394329 PEAK CID FTMS 0 0 0 -1 0 2 3 WQW{I|L}DR 6 -1 17.942 0.0 0.0 0.85891 0.0 0.0 979.3843791155394 222.12603174381096 1201.5104108593505 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 WQW{I|L}DR 0.85891 - 331 + 1 2.268 41809.2 1.0 15532 6494 22026 HBL1_DMSO_200M_050219_1,22028 HBL1_DMSO_200M_050219_1,22028, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22029 109.98 696.0 98781.0 25 0 1489.8 -1 0 105 860.8335272922649 0 860.8928710818291 PEAK CID FTMS 0 0 0 -1 0 3 3 N 1 -1 3.9794 0.0 0.0 0.23141 0.0 0.0 1383.5040774343358 219.07862268619377 1602.5827001205296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.23141 - 34 + 1 2.268 49163.2 1.0 15533 6494 22026 HBL1_DMSO_200M_050219_1,22029 HBL1_DMSO_200M_050219_1,22029, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22031 109.99 248.0 246180.0 25 0 18205.0 -1 0 100 1156.393369877327 0 1155.963305652142 PEAK CID FTMS 0 0 0 22030 112792.7265625 0.7434229775066886 1 -0.0263900756835937 1 3 T 1 -1 3.4949 0.0 0.0 0.15124 0.0 0.0 1589.4992508857097 617.1917818658811 2206.6910327515907 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.15124 - 16 + 1 2.192 45327.5 1.0 15534 6495 22030 HBL1_DMSO_200M_050219_1,22031 HBL1_DMSO_200M_050219_1,22031, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22032 109.99 174.0 250170.0 25 0 3800.2 -1 0 103 1124.302294909954 0 1124.302294909954 PEAK CID FTMS 0 0 0 -1 0 2 3 N 1 -1 1.9897 0.0 0.0 0.088565 0.0 0.0 1627.4731678454957 502.0451449029906 2129.5183127484866 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.088565 - 12 + 1 2.192 34799.6 1.0 15535 6495 22030 HBL1_DMSO_200M_050219_1,22032 HBL1_DMSO_200M_050219_1,22032, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22033 110.0 800.0 402330.0 25 0 39312.0 -1 0 172 918.7690307497978 0 918.7690307497978 PEAK CID FTMS 0 0 0 -1 0 3 3 {I|L}PVWVTS 7 -1 34.958 0.0 0.0 1.9045 0.0 0.0 918.0181597510744 132.04616724185783 1050.0643269929324 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5941876774005248 0.0 {I|L}PVWVTS 1.9045 - 2036 + 1 2.192 203524.6 0.7300000190734863 15536 6495 22030 HBL1_DMSO_200M_050219_1,22033 HBL1_DMSO_200M_050219_1,22033, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22035 110.02 495.0 223610.0 25 0 2385.3 -1 0 122 1007.424731433392 0 1007.424731433392 PEAK CID FTMS 0 0 0 -1 0 1 3 G{I|L}VKWDH 7 -1 24.941 0.0 0.0 1.2391 0.0 0.0 894.265037962684 280.0958651178344 1174.3609030805185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L}VKWDH 1.2391 - 183 + 1 2.192 69092.0 1.0 15537 6496 22034 HBL1_DMSO_200M_050219_1,22035 HBL1_DMSO_200M_050219_1,22035, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_1 22036 110.03 587.0 168740.0 25 0 9491.0 -1 0 155 913.1276122927666 0 913.1276122927666 PEAK CID FTMS 0 0 0 -1 0 2 3 R{I|L}TQ 4 -1 18.387 0.0 0.0 1.0079 0.0 0.0 1115.8225941150267 207.1150911920532 1322.9376853070798 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.0 R{I|L}TQ 1.0079 - 290 + 1 2.192 67514.8 1.0 15538 6496 22034 HBL1_DMSO_200M_050219_1,22036 HBL1_DMSO_200M_050219_1,22036, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 27 0.11769 800.0 69264.0 25 0 49515.0 3456 CERERERER 9 30 631.8045532107353 0 631.8045532107353 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 47319.5 0.9300000071525574 0 25 26 HBL1_DMSO_200M_050219_2,27 HBL1_DMSO_200M_050219_2,27,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 281 1.1432 577.0 79178.0 25 0 52458.0 3457 CERERERER 9 37 631.8022338747978 0 631.8022338747978 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 39290.2 1.0 1 278 280 HBL1_DMSO_200M_050219_2,281 HBL1_DMSO_200M_050219_2,281,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 374 1.5253 793.0 69826.0 25 0 50283.0 3458 CERERERER 9 26 631.8045532107353 0 631.8045532107353 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 47546.9 1.0 2 370 373 HBL1_DMSO_200M_050219_2,374 HBL1_DMSO_200M_050219_2,374,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 445 1.818 745.0 80251.0 25 0 56387.0 30265 QYKFYSVNVD 10 41 631.8036987185478 0 631.8036987185478 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _QYKFYSVNVD_ ENSG00000189043|ENST00000339600|NDUFA4 1.3295316138638542 0.3961065659209837 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 48751.0 1.0 3 440 444 HBL1_DMSO_200M_050219_2,445 HBL1_DMSO_200M_050219_2,445,QYKFYSVNVD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 560 2.2853 575.0 95762.0 25 0 66347.0 -1 IMWFYLLMN 9 38 631.8036987185478 0 631.8036987185478 PEAK CID FTMS 0 0 0 -1 0 1 2 Oxidation (M) _IM(Oxidation (M))WFYLLM(Oxidation (M))N_ ENSG00000205060|ENST00000378509|SLC35B4;nc|ENSG00000205060|Q969S0-3|SLC35B4 0.6014990680409731 0.3444685223463735 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 49335.2 1.0 4 554 559 HBL1_DMSO_200M_050219_2,560 HBL1_DMSO_200M_050219_2,560,IMWFYLLMN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 641 2.6186 764.0 107690.0 25 0 79540.0 3459 CERERERER 9 36 631.8040649294853 0 631.8040649294853 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 66724.2 1.0 5 634 640 HBL1_DMSO_200M_050219_2,641 HBL1_DMSO_200M_050219_2,641,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 648 2.6541 751.0 109150.0 25 0 43822.0 + 26277 NQRRREEWE 9 64 434.8821874453572 0 434.8824951052666 PEAK CID FTMS 0 0 0 647 148691.9375 0.750492387492987 31 -0.1360969543457031 1 Unmodified _NQRRREEWE_ REV__chr19:47272161-47273357|48|34.67|0.0|21.73|+|ENST00000643617|CCDC9,CCDC9;REV__ENSG00000105321|ENST00000221922|CCDC9 0.4583401331227399 0.3444685223463734 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 73801.0 1.0 6 640 647 HBL1_DMSO_200M_050219_2,648 HBL1_DMSO_200M_050219_2,648,NQRRREEWE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 918 3.7477 800.0 65644.0 25 0 44486.0 3460 CERERERER 9 37 631.8036800740252 0 631.8040649294853 PEAK CID FTMS 0 0 0 917 63943.90234375 0.2176772013940158 -509 2.0895267724990845 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 43708.6 0.4099999964237213 7 909 917 HBL1_DMSO_200M_050219_2,918 HBL1_DMSO_200M_050219_2,918,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 982 4.0134 800.0 64895.0 25 0 40177.0 + -1 CSQRKECIY 9 36 614.7771699371494 0 614.7781249880791 PEAK CID FTMS 0 0 0 981 90392.453125 0.8606430606793899 -166 0.6798312664031982 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))CSQRKEC(Carbamidomethyl (C))IY_ REV__ENST00000589345.6_1_19:15962923-15965568:-|nuORF 0.5247636613948944 0.3444685223463735 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 45738.6 0.3799999952316284 8 972 981 HBL1_DMSO_200M_050219_2,982 HBL1_DMSO_200M_050219_2,982,CSQRKECIY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1072 4.3835 800.0 92181.0 25 0 69218.0 3461 CERERERER 9 31 631.8036800740252 0 631.8038818240166 PEAK CID FTMS 0 0 0 1071 131827.34375 0.4487653427913082 -357 1.4598286151885986 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 59976.0 0.5299999713897705 9 1061 1071 HBL1_DMSO_200M_050219_2,1072 HBL1_DMSO_200M_050219_2,1072,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1176 4.8063 593.0 129880.0 25 0 96325.0 + 6687 ECFFHNLKQP 10 36 631.8036800740252 0 631.8038818240166 PEAK CID FTMS 0 0 0 1175 189889.6875 0.646420600456587 -254 1.0457496643066406 1 Unmodified _ECFFHNLKQP_ REV__ENSG00000221933|ENST00000641663|OR2A25 1.6526216038709556 0.3961065659209837 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 62131.9 1.0 10 1164 1175 HBL1_DMSO_200M_050219_2,1176 HBL1_DMSO_200M_050219_2,1176,ECFFHNLKQP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1271 5.194 651.0 101030.0 25 0 41607.0 + -1 TEIFLTMSLTM 11 55 434.8821788184625 0 434.8823425173759 PEAK CID FTMS 0 0 0 1270 123674.53125 0.5485297742704659 -502 2.063982963562012 1 Oxidation (M) _TEIFLTM(Oxidation (M))SLTM_ REV__ENST00000296315.7_1_3:56762359-56762437:-|nuORF 0.0 0.4761840153648598 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 57985.2 1.0 11 1258 1270 HBL1_DMSO_200M_050219_2,1271 HBL1_DMSO_200M_050219_2,1271,TEIFLTMSLTM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1457 5.9456 527.0 134890.0 25 0 101820.0 3462 CERERERER 9 26 631.8036800740252 0 631.8036376833916 PEAK CID FTMS 0 0 0 1456 233639.921875 0.7953547166118096 25 -0.1083641052246093 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.942 61890.8 1.0 12 1443 1456 HBL1_DMSO_200M_050219_2,1457 HBL1_DMSO_200M_050219_2,1457,CERERERER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1829 7.4417 341.0 276050.0 25 0 40701.0 + 11974 GPEAGRKPA 9 77 441.7431391733977 881.4717254135954 2 441.7428771853447 MULTI CID FTMS 0 0 0 1828 179583.359375 0.0279231614894282 -7 0.0280561447143554 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 57.72198328787511 0.0273433238377839 4 GPEAS 5 5 78.443 0.0 0.0 8.8991 0.0 0.0 0.0 437.26566320481845 437.26566320481845 36.05983738459592 0.0 0.0 0.0 0 1.424742501084005 2.0 0.9247425010840048 0.0 GPEAS 8.8991 - 317 + 1 1.942 78314.9 1.0 13 1814 1828 HBL1_DMSO_200M_050219_2,1829 HBL1_DMSO_200M_050219_2,1829,GPEAGRKPA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1833 7.4614 523.0 178500.0 25 0 8331.7 + -1 GADAMAEVFNA 11 122 556.2416051383809 1110.4686573435615 2 556.2421142458916 MULTI CID FTMS 0 0 0 1832 177136.265625 0.3482005234715719 -4 0.0205521583557128 1 Oxidation (M) _GADAM(Oxidation (M))AEVFNA_ REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1 32.78568957990786 0.3235288296534633 4 {[DA]|[EG]}QHEAGAQGQ 11 -1 + 88.175 0.0 0.0 7.9404 7.9404 79.083 0.0 0.0 0.0 0.5536448028486944 8.292363864933677 0.5536448028486944 0.5536448028486944 0 0.9731975075880328 0.5686362358410126 1.4291746928241125 2.079689690656103 {[DA]|[EG]}QHEAGAQGQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQGQ;[AG]DAHEAQQGQ;[AG]DAHEAGAQGQ;[QA]DHEAGAQGQ;[AG]DAHEQAQGQ;{[DA]|[EG]}QHEAQQGQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQGQ;{[QG]|[NA]}EHEAGAQGQ;{[DA]|[EG]}QHEAGA[AG]GQ 7.9404;7.8905;7.6035;7.5453;7.3569;7.3324;7.3046;7.2547;7.1572;7.1183 -;-;-;-;-;-;-;-;-;- 2936 1 1.942 74511.7 1.0 14 1817 1832 HBL1_DMSO_200M_050219_2,1833 HBL1_DMSO_200M_050219_2,1833,GADAMAEVFNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1834 7.4685 400.0 511620.0 25 0 30410.0 + 28894 QAPKPRKQ 8 171 318.1926932583396 0 318.1942932009697 PEAK CID FTMS 0 0 0 1832 136701.96875 0.5056474752494189 -2 0.0079460144042968 2 Unmodified _QAPKPRKQ_ ENSG00000161634|ENST00000293371|DCD;nc|ENSG00000161634|P81605-2|DCD 60.38955033654506 0.035681871431181 4 ERPG 4 7 18.972 0.0 0.0 2.9907 0.0 0.0 124.08039896518136 68.05120264224843 192.1316016074298 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 ERPG 2.9907 - 38 + 1 1.942 168044.9 1.0 15 1817 1832 HBL1_DMSO_200M_050219_2,1834 HBL1_DMSO_200M_050219_2,1834,QAPKPRKQ True True QAPKPRKQ 7.4685438 318.19429320097 711883.6875 1832.0 nc|ENSG00000161634|P81605-2|DCD;;ENSG00000161634|ENST00000293371|DCD 2.0445874532063804 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1835 7.4824 800.0 76126.0 25 0 3987.1 -1 0 109 607.6136839142914 1819.8192223430744 3 607.6140624880791 MULTI CID FTMS 0 0 0 1832 86168.34375 0.5637080034381975 -3 0.0166664123535156 3 4 KSGE 4 -1 51.102 0.0 0.0 2.8081 0.0 0.0 1400.627463165143 0.0 1400.627463165143 0.0 37.830918867322296 0.0 0.0 0 0.8807196863200843 0.0 1.0356668758921828 0.0 KSGE 2.8081 - 232 + 1 1.942 52866.4 0.3899999856948852 16 1817 1832 HBL1_DMSO_200M_050219_2,1835 HBL1_DMSO_200M_050219_2,1835, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 1838 7.494 281.0 353910.0 25 0 45155.0 -1 AALSREMK 8 110 461.2446921826596 920.4748314321192 2 461.2450744509697 MULTI CID FTMS 0 0 0 1837 299066.96875 0.96248932427219 -1 0.0038895606994628 1 Oxidation (M) _AALSREM(Oxidation (M))K_ ENSG00000144747|ENST00000398559|TMF1;nc|ENSG00000144747|P82094-2|TMF1 18.13498045792455 0.6430038125133779 4 {I|L}{M(Oxidation (M))|F}K 3 -1 28.232 0.0 0.0 3.0671 0.0 0.0 514.2509067268443 0.0 514.2509067268443 0.0 11.15356566548286 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 {I|L}{M(Oxidation (M))|F}K 3.0671 - 191 + 1 1.942 83500.5 1.0 17 1819 1837 HBL1_DMSO_200M_050219_2,1838 HBL1_DMSO_200M_050219_2,1838,AALSREMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1839 7.5034 539.0 187860.0 25 0 22843.0 + 17652 KPTGARPS 8 144 407.2320470795844 812.4495412259688 2 407.2321044802666 MULTI CID FTMS 0 0 0 1837 143843.34375 1.0 0 0.0 2 Unmodified _KPTGARPS_ ENST00000473611.5_1_6:33247055-33247262:-|nuORF;ENSG00000227057|ENST00000374617|WDR46 22.736283301280096 0.5659792798204337 4 KPTGWPK 7 3 + 41.525 0.0 0.0 5.1111 5.1111 77.227 0.0 0.0 0.0 28.668118511231874 0.8629495355091095 0.8629495355091095 5.216276944278832 0 1.242992819099939 0.0 0.4247425010840047 0.1694451763165201 KPTGWPK;KPTGWKP;KPT[WK]GP;KP{[WN]|[YH]}[VG]{I|L};KP{[WN]|[YH]}{[VA]|[{I|L}G]}V 5.1111;4.469;3.3668;2.8891;2.7353 -;-;-;-;- 104 + 1 1.942 83177.0 1.0 18 1819 1837 HBL1_DMSO_200M_050219_2,1839 HBL1_DMSO_200M_050219_2,1839,KPTGARPS False False KPTGARPS 7.5034269 407.232104480267 654268.5 1837.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 4.1780374844868975 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1840 7.5122 498.0 415100.0 25 0 30539.0 -1 0 231 330.226465520632 658.4383781080641 2 330.2258788943291 MULTI CID FTMS 0 0 0 1837 88984.84375 0.7472822753057379 -2 0.0366206169128418 3 4 R 1 -1 11.99 0.0 0.0 1.8209 0.0 0.0 484.3270937836484 0.0 484.3270937836484 0.0 0.6073469250739549 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.8209 - 71 + 1 1.942 166607.5 1.0 19 1819 1837 HBL1_DMSO_200M_050219_2,1840 HBL1_DMSO_200M_050219_2,1840, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 1842 7.5251 509.0 131890.0 25 0 5856.6 + -1 SPGERHGSRHQQSAD 15 107 550.5857063418679 0 550.5848876833916 PEAK CID FTMS 0 0 0 1841 80964.7734375 0.8087853669774603 1 -0.0405559539794921 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))EFWFWELQIY_ P20930;ENSG00000143631|ENST00000368799|FLG 0.0948413911109767 0.4761840153648598 4 NEG 3 -1 6.9112 0.0 0.0 0.62878 0.0 0.0 314.8248361908682 481.201694957783 796.0265311486512 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NEG 0.62878 - 111 + 1 2.44 56203.4 1.0 20 1820 1841 HBL1_DMSO_200M_050219_2,1842 HBL1_DMSO_200M_050219_2,1842,MEFWFWELQIY False False SPGERHGSRHQQSAD 7.5251017 550.584887683392 737270.875 1841.0 P20930;;ENSG00000143631|ENST00000368799|FLG 5.251320838928223 3.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1843 7.5389 800.0 87612.0 25 0 8031.3 -1 0 57 804.1553776569257 4015.740505951628 5 804.3578369021416 MULTI CID FTMS 0 0 0 1841 118859.484375 1.0 0 0.0 2 4 [W{I|L}]P 3 -1 5.0617 0.0 0.0 0.12605 0.0 0.0 0.0 3616.528279309136 3616.528279309136 -0.8804562952784067 0.0 -0.8804562952784067 0.0 0 0.0 0.0 0.0 0.0 [W{I|L}]P 0.12605 - 2 + 1 2.44 60000.1 0.4900000095367431 21 1820 1841 HBL1_DMSO_200M_050219_2,1843 HBL1_DMSO_200M_050219_2,1843, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 1844 7.5528 800.0 231730.0 25 0 53900.0 -1 CTSCSCMA 8 59 992.29618446577 991.28890799917 1 992.294970691204 MULTI CID FTMS 0 0 0 1841 92505.046875 0.3198873604054221 -3 0.0626058578491211 3 3 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))TSC(Carbamidomethyl (C))SC(Carbamidomethyl (C))M(Oxidation (M))A_ ENSG00000135253|ENST00000610776|KCP;ENST00000492679.5_1_7:128505031-128520709:-|nuORF;nc|ENSG00000135253|Q6ZWJ8|KCP 0.6903765706972694 0.8201419426409876 4 C(Carbamidomethyl (C))C(Carbamidomethyl (C))[MD] 4 -1 13.188 0.0 0.0 1.3303 0.0 0.0 407.1657523368636 0.0 407.1657523368636 0.0 10.088643834802156 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))C(Carbamidomethyl (C))[MD] 1.3303 - 17 + 1 2.44 131313.6 0.4399999976158142 22 1820 1841 HBL1_DMSO_200M_050219_2,1844 HBL1_DMSO_200M_050219_2,1844,CTSCSCMA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1846 7.5692 800.0 194820.0 25 0 11538.0 + 11953 GNPGPAEK 8 224 385.1960793410343 0 385.1950866580009 PEAK CID FTMS 0 0 0 1845 77117.28125 0.8742659841418918 1 -0.0163540840148925 1 Unmodified _GNPGPAEK_ REV__ENSG00000161217|ENST00000431016|PCYT1A;REV__ENST00000473978.5_1_3:195974976-195997402:-|nuORF;REV__ENST00000491544.1_1_3:195974480-195997402:-|nuORF 11.640296217721598 0.5231213682848052 4 EAAD 4 -1 15.94 0.0 0.0 2.0745 0.0 0.0 146.10918641468726 233.104303228186 379.2134896428733 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.2887254899964357 0.0 EAAD 2.0745 - 56 + 1 2.44 124412.4 0.4300000071525574 23 1821 1845 HBL1_DMSO_200M_050219_2,1846 HBL1_DMSO_200M_050219_2,1846,GNPGPAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1849 7.5896 800.0 94898.0 25 0 10675.0 + -1 CCCCCCEMFAR 11 52 758.2248356338118 0 758.2250854372978 PEAK CID FTMS 0 0 0 1848 98952.390625 1.0 0 0.0 1 4 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CCEM(Oxidation (M))FAR_ REV__ENSG00000170775|ENST00000303921|GPR37 0.0 0.4761840153648598 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.44 59532.0 0.449999988079071 24 1823 1848 HBL1_DMSO_200M_050219_2,1849 HBL1_DMSO_200M_050219_2,1849,CCCCCCEMFAR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1850 7.6035 800.0 46899.0 25 0 4097.0 -1 0 50 839.2532836794853 0 839.2532836794853 PEAK CID FTMS 0 0 0 -1 0 2 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.44 33766.9 0.4399999976158142 25 1823 1848 HBL1_DMSO_200M_050219_2,1850 HBL1_DMSO_200M_050219_2,1850, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 1853 7.6239 800.0 121870.0 25 0 80319.0 + -1 HQMCLTRLTSG 11 64 631.8038426326052 0 631.8027221560478 PEAK CID FTMS 0 0 0 1852 130783.7421875 0.0448299791435844 -225 1.034989356994629 1 Oxidation (M) _HQM(Oxidation (M))CLTRLTSG_ REV__ENSG00000090905|ENST00000395799|TNRC6A;REV__ENST00000464539.1_1_16:24833345-24835125:+|nuORF;REV__nc|ENSG00000090905|Q8NDV7-2|TNRC6A;REV__nc|ENSG00000090905|Q8NDV7-5|TNRC6A;REV__nc|ENSG00000090905|Q8NDV7-6|TNRC6A 2.9952420565917617 0.4761840153648598 4 A 1 -1 3.0989 0.0 0.0 0.24564 0.0 0.0 996.4769041599384 191.05727564029533 1187.534179800234 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.24564 - 1 + 1 2.764 74983.8 0.5199999809265137 26 1825 1852 HBL1_DMSO_200M_050219_2,1853 HBL1_DMSO_200M_050219_2,1853,HQMCLTRLTSG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1854 7.6378 800.0 72592.0 25 0 27377.0 -1 LCTCQDCM 8 33 973.324186079744 972.316909613144 1 973.3245117068292 MULTI CID FTMS 0 0 0 1852 98294.1796875 1.0 0 0.0 2 Carbamidomethyl (C) _LC(Carbamidomethyl (C))TCQDCM_ ENSG00000012963|ENST00000013070|UBR7 0.7936320650641473 0.8195151834710337 4 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.47352 0.0 0.0 501.1752297809158 321.08237174213986 822.2576015230557 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.47352 + + 5 + 1 2.764 51662.0 0.959999978542328 27 1825 1852 HBL1_DMSO_200M_050219_2,1854 HBL1_DMSO_200M_050219_2,1854,LCTCQDCM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1855 7.6516 800.0 57375.0 25 0 22259.0 27540 PKVLLKLLP 9 72 510.862395050692 0 510.8624755740166 PEAK CID FTMS 0 0 0 1852 74343.6640625 0.570402980341035 -70 0.4114413261413574 3 Unmodified _PKVLLKLLP_ ENSG00000186190|ENST00000375494|BPIFB3 0.5247636613948944 0.3444685223463735 4 P 1 8 1.5938 0.0 0.0 0.1563 0.0 0.0 794.5630489131044 125.07222925357657 919.6352781666808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.1563 + + 2 + 1 2.764 42412.5 0.4399999976158142 28 1825 1852 HBL1_DMSO_200M_050219_2,1855 HBL1_DMSO_200M_050219_2,1855,PKVLLKLLP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1866 7.6927 29.0 2117000.0 25 0 305690.0 + 11975 GPEAGRKPA 9 80 441.7431391733977 881.4717254135954 2 441.7433349490166 MULTI CID FTMS 0 0 0 1865 2102572.0 0.3269259340257291 14 -0.0760388374328613 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 51.629811660486645 0.0367964933207742 4 GPEA{[NV]|[RG]}KPA 9 0 + 67.871 0.0 0.0 7.6997 7.6997 96.554 0.0 0.0 0.0 29.50582153349373 4.695371514980806 4.695371514980806 57.218487496163554 0 1.6549471895720984 2.0 0.5 0.0 + + GPEA{[NV]|[RG]}KPA;[VS]K{[NV]|[RG]}QHA 7.6997;1.2085 +;- + 126 + 1 2.889 52182.7 1.0 29 1835 1865 HBL1_DMSO_200M_050219_2,1866 HBL1_DMSO_200M_050219_2,1866,GPEAGRKPA True True GPEAGRKPA 7.6927235 441.743334949017 108768632.0 1865.0 nc|ENSG00000204469|P48634-3|PRRC2A;;ENSG00000204469|ENST00000376033|PRRC2A;;nc|ENSG00000204469|P48634-2|PRRC2A 4.81391970316569 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1867 7.6987 309.0 283640.0 25 0 32331.0 -1 VSTLSDQSIM 10 122 366.1772756283463 0 366.1783019900322 PEAK CID FTMS 0 0 0 1865 77889.9296875 0.4357677041061048 -116 0.6367754936218262 2 Oxidation (M) _VSTLSDQSIM(Oxidation (M))_ ENSG00000066422|ENST00000312938|ZBTB11 3.876331618118854 0.3961065659209837 4 S 1 -1 2.3808 0.0 0.0 0.32599 0.0 0.0 572.2346496680223 68.05120264224843 640.2858523102707 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1271595765414318 0.0 S 0.32599 + + 6 + 1 2.889 75480.2 1.0 30 1835 1865 HBL1_DMSO_200M_050219_2,1867 HBL1_DMSO_200M_050219_2,1867,VSTLSDQSIM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1870 7.7136 468.0 217960.0 25 0 135850.0 + -1 YCPPPREFY 9 45 614.7771827430464 0 614.7769653201103 PEAK CID FTMS 0 0 0 1869 209763.21875 0.3296792744998346 -218 1.0538249015808103 1 Carbamidomethyl (C) _YC(Carbamidomethyl (C))PPPREFY_ REV__ENST00000371100.8_1_20:57428268-57428349:+|nuORF 1.844237919475145 0.3444685223463735 4 M 1 -1 3.0989 0.0 0.0 0.25245 0.0 0.0 649.1657413632428 444.31296716861567 1093.4787085318585 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.25245 - 1 + 1 2.889 78176.7 1.0 31 1837 1869 HBL1_DMSO_200M_050219_2,1870 HBL1_DMSO_200M_050219_2,1870,YCPPPREFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1871 7.7198 342.0 113380.0 25 0 5375.3 + -1 EFIMDQQQG 9 87 556.2416051383809 1110.4686573435615 2 556.2416259646416 MULTI CID FTMS 0 0 0 1869 167019.671875 0.328314120046106 16 -0.0772848129272461 2 Oxidation (M) _EFIM(Oxidation (M))DQQQG_ REV__ENSG00000076382|ENST00000321765|SPAG5 30.63653989081413 0.1413794767160703 4 [AG]DAHEAGAQAN 12 -1 + 75.805 0.0 0.0 6.8264 6.8264 78.227 0.0 0.0 0.0 10.308698317029156 7.619478172486467 7.619478172486467 1.7339374311232802 0 0.7914478256039673 2.0 1.1549471895720984 0.0 [AG]DAHEAGAQAN;[AG]AHDEAGAQAN;[AG]DAHEAQQAN;[AG]AHDEAQQAN;[AG]ADHEAGAQAN;[AG]DAHEAGA[AG]AN;[AG]ADHEAQQAN;[QA]HDEAGAQAN;[AG]DAHEQAQAN;[AG]AHDEAGA[AG]AN 6.8264;6.6702;6.502;6.3459;6.2406;6.007;5.9162;5.898;5.8881;5.8509 -;-;-;-;-;-;-;-;-;- 584 1 2.889 34324.2 1.0 32 1837 1869 HBL1_DMSO_200M_050219_2,1871 HBL1_DMSO_200M_050219_2,1871,EFIMDQQQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1896 7.8286 800.0 107100.0 25 0 36421.0 + 6011 DRYLYKQTTD 10 68 434.88224150056936 0 434.8824340701103 PEAK CID FTMS 0 0 0 1895 93481.46875 0.6473854574721728 14 -0.0686497688293457 1 Unmodified _DRYLYKQTTD_ REV__ENSG00000171466|ENST00000453372|ZNF562 1.3295316138638542 0.3961065659209837 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.994 73356.7 0.4900000095367431 33 1861 1895 HBL1_DMSO_200M_050219_2,1896 HBL1_DMSO_200M_050219_2,1896,DRYLYKQTTD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1926 7.9469 154.0 396090.0 25 0 54975.0 + 11976 GPEAGRKPA 9 87 441.7431391733977 881.4717254135954 2 441.7431518435478 MULTI CID FTMS 0 0 0 1925 413567.6875 0.0643050523448416 69 -0.4330677986145019 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 39.94969957227396 0.0757326808254658 4 GPEAS 5 5 75.503 0.0 0.0 8.5656 0.0 0.0 0.0 437.2648104303344 437.2648104303344 66.03917193908117 0.0 0.0 0.0 0 1.555462187404089 2.0 0.5 0.0 GPEAS 8.5656 - 66 + 1 3.135 55764.6 1.0 34 1890 1925 HBL1_DMSO_200M_050219_2,1926 HBL1_DMSO_200M_050219_2,1926,GPEAGRKPA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1951 8.0516 565.0 238750.0 25 0 44051.0 + -1 PCFVKVSME 9 148 366.1772756283463 0 366.1777221560478 PEAK CID FTMS 0 0 0 1950 95549.4375 0.5345666529043849 -37 0.1502223014831543 1 Carbamidomethyl (C) _PC(Carbamidomethyl (C))FVKVSME_ REV__L1MA6_dup169|chr1:157530941-157532123:+|1.863022366218344|0.2573555311713708|2.86|46.0|71|2|anti-sense 4.5288652416199255 0.3444685223463734 4 VD 2 -1 9.464 0.0 0.0 1.2958 0.0 0.0 99.01976014165504 414.2000521295532 513.2198122712082 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VD 1.2958 - 7 + 1 3.184 111873.0 1.0 35 1914 1950 HBL1_DMSO_200M_050219_2,1951 HBL1_DMSO_200M_050219_2,1951,PCFVKVSME False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1967 8.1205 560.0 226850.0 25 0 16104.0 + -1 SRGEHRQDRRERPY 14 88 461.2357455394767 1840.9138762915068 4 461.4866821169853 MULTI CID FTMS 0 0 0 1966 97644.515625 0.4305451370248828 -19 0.0849571228027343 1 ENSG00000089280|ENST00000254108|FUS;ENST00000483853.1_1_16:31202042-31202756:+|nuORF;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 4 YP{[CT]|[{M(Oxidation (M))|F}G]}V 5 -1 19.693 0.0 0.0 1.0697 0.0 0.0 0.0 1274.6209105610078 1274.6209105610078 9.503187623076952 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 YP{[CT]|[{M(Oxidation (M))|F}G]}V 1.0697 - 36 + 1 3.223 102977.1 1.0 36 1929 1966 HBL1_DMSO_200M_050219_2,1967 HBL1_DMSO_200M_050219_2,1967, False False SRGEHRQDRRERPY 8.120473 461.2362 4636209.0 1966.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000483853.1_1_16:31202042-31202756:+|nuORF;;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 4.967367092768352 4.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1978 8.173 800.0 48019.0 25 0 2860.9 -1 MLQCYRCRQWF 11 78 555.2487948333969 1662.7245551003907 3 555.2491332888603 MULTI CID FTMS 0 0 0 1977 45336.8984375 0.3696304480879593 -2 0.007944107055664 1 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LQC(Carbamidomethyl (C))YRC(Carbamidomethyl (C))RQWF_ ENSG00000119403|ENST00000373896|PHF19;ENST00000474402.5_1_9:123628304-123631123:-|nuORF;ENST00000487555.5_1_9:123623373-123629236:-|nuORF 0.5059551277355931 0.8727608062196215 4 QGYHEH 6 -1 23.313 0.0 0.0 1.4021 0.0 0.0 893.4104204341783 0.0 893.4104204341783 0.0 11.094435720622258 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.5 QGYHEH 1.4021 - 212 + 1 3.223 39505.9 0.4099999964237213 37 1939 1977 HBL1_DMSO_200M_050219_2,1978 HBL1_DMSO_200M_050219_2,1978,MLQCYRCRQWF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1983 8.1995 686.0 108400.0 25 0 35131.0 + 40263 VGTHPFFFFFG 11 65 434.8822048922846 0 434.8824035525322 PEAK CID FTMS 0 0 0 1982 112633.234375 0.5837655714439003 -329 1.5560507774353027 1 Unmodified _VGTHPFFFFFG_ REV__ENST00000481710.5_1_21:35774452-35774542:+|nuORF 1.4819007175156935 0.4761840153648598 4 C(Carbamidomethyl (C)) 1 -1 3.4949 0.0 0.0 0.40275 0.0 0.0 345.63408644296925 359.06699548892817 704.7010819318974 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.40275 - 1 + 1 3.258 63669.2 1.0 38 1943 1982 HBL1_DMSO_200M_050219_2,1983 HBL1_DMSO_200M_050219_2,1983,VGTHPFFFFFG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1984 8.2134 800.0 19153.0 25 0 956.33 -1 0 45 837.71534785853 2510.12421417579 3 838.3858520388603 MULTI CID FTMS 0 0 0 1982 66616.2890625 0.6747407965720458 -2 0.0079326629638671 2 4 V 1 -1 5.4846 0.0 0.0 0.2185 0.0 0.0 1572.6883754080147 835.3292330377561 2408.0176084457707 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.2185 - 10 + 1 3.258 18933.4 0.3499999940395355 39 1943 1982 HBL1_DMSO_200M_050219_2,1984 HBL1_DMSO_200M_050219_2,1984, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 1986 8.2297 800.0 150820.0 25 0 15046.0 + 11977 GPEAGRKPA 9 122 441.7431391733977 881.4717254135954 2 441.7431518435478 MULTI CID FTMS 0 0 0 1985 136619.296875 0.0212427404325738 123 -0.6505613327026367 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 53.832793166522166 0.0319663582346103 4 GPEAS 5 5 78.192 0.0 0.0 8.8707 0.0 0.0 0.0 437.2672997301877 437.2672997301877 45.6400629256776 0.0 0.0 0.0 0 1.4749073637206092 2.0 0.8494850021680094 0.0 GPEAS 8.8707 - 496 + 1 3.258 98466.9 0.5600000023841858 40 1944 1985 HBL1_DMSO_200M_050219_2,1986 HBL1_DMSO_200M_050219_2,1986,GPEAGRKPA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1987 8.2418 693.0 35976.0 25 0 1366.9 -1 0 70 808.7048046088283 2423.092584426685 3 809.0422851443291 MULTI CID FTMS 0 0 0 1985 68424.40625 0.4248752902778566 -6 0.0608282089233398 2 4 S 1 -1 5.4846 0.0 0.0 0.22635 0.0 0.0 2164.9596326218007 168.07770715885002 2333.0373397806507 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.22635 - 48 + 1 3.258 27030.2 1.0 41 1944 1985 HBL1_DMSO_200M_050219_2,1987 HBL1_DMSO_200M_050219_2,1987, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 1991 8.2568 241.0 311810.0 25 0 26419.0 -1 MLPPLQTMK 9 98 358.8621177775031 1073.564523932709 3 358.8622314333916 MULTI CID FTMS 0 0 0 1990 169475.03125 0.5614696396778155 -7 0.0767688751220703 1 Oxidation (M) _MLPPLQTM(Oxidation (M))K_ ENSG00000283758|ENST00000640449|PMIS2 10.150570793230772 0.5619192000662246 4 KT[VP]HAPDK 9 -1 38.727 0.0 0.0 3.6073 0.0 0.0 82.01102806432705 0.0 82.01102806432705 0.0 25.336838297297128 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.2614393726401688 KT[VP]HAPDK 3.6073 - 198 + 1 3.258 62809.5 1.0 42 1947 1990 HBL1_DMSO_200M_050219_2,1991 HBL1_DMSO_200M_050219_2,1991,MLPPLQTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1992 8.2706 800.0 144100.0 25 0 6526.6 + 21607 LPKQEKRHV 9 159 378.89665006513206 1133.6681207955962 3 378.8961364626884 MULTI CID FTMS 0 0 0 1990 80154.9453125 1.0 0 0.0 2 Unmodified _LPKQEKRHV_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;ENST00000569569.5_1_16:56966069-56970730:+|nuORF;ENST00000570273.5_1_16:56966069-56976120:+|nuORF 7.945399516374404 0.6373142958196798 4 {I|L}PKQE 5 4 30.3 0.0 0.0 2.6728 0.0 0.0 0.0 535.3089693658811 535.3089693658811 19.81585215058027 0.0 0.0 0.0 0 0.1271595765414318 0.0 0.0 0.4247425010840047 + {I|L}PKQE 2.6728 + + 183 + 1 3.258 94771.3 0.3799999952316284 43 1947 1990 HBL1_DMSO_200M_050219_2,1992 HBL1_DMSO_200M_050219_2,1992,LPKQEKRHV False True LPKQEKRHV 8.2705931 378.896136462688 345751.75 1990.0 ENST00000569569.5_1_16:56966069-56970730:+|nuORF;;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;;ENSG00000051108|ENST00000439977|HERPUD1 4.536206404368083 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 1996 8.2951 800.0 226130.0 25 0 24677.0 + 36115 SVSLAEQTEEK 11 179 407.5387902468874 1219.5945413408622 3 407.5384704470634 MULTI CID FTMS 0 0 0 1995 93503.578125 0.0607916908577996 -11 0.1221141815185546 1 Unmodified _SVSLAEQTEEK_ REV__ENST00000430145.3_1_19:49166463-49183997:+|nuORF 26.268140514670165 0.4754186812857754 4 [VS]QHHVDAAEK 11 -1 + 93.216 0.0 0.0 7.6432 7.6432 90.075 0.0 0.0 0.0 24.98197937865585 11.449547525874848 11.449547525874848 9.128498242810991 0 1.579689690656103 2.0 0.6549471895720984 0.8252574989159953 [VS]QHHVDAAEK;[VS][AG]HHVDAAEK;[VS]QHHVDAAKE;[VS][AG]HHVDAAKE;[VS]QHHA[DV]AEK;[VS]QHHVDA{[TV]|[{I|L}S]}Q;[VS][AG]HHA[DV]AEK;[VS][AG]HHVDA{[TV]|[{I|L}S]}Q;[VS]QHH{[QN]|[E{I|L}]|[KN]}NEK;[VS]QHHA[DV]AKE 7.6432;6.8947;6.7044;5.9559;5.9018;5.8337;5.1534;5.0852;5.0454;4.963 -;-;-;-;-;-;-;-;-;- 2593 + 1 3.283 144820.5 0.4600000083446502 44 1950 1995 HBL1_DMSO_200M_050219_2,1996 HBL1_DMSO_200M_050219_2,1996,SVSLAEQTEEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 1997 8.3089 800.0 43878.0 25 0 3755.2 -1 0 73 572.931156204779 1715.771639214537 3 572.9316284060478 MULTI CID FTMS 0 0 0 1995 78049.9453125 0.5501489804306654 -4 0.0328683853149414 2 4 Q 1 -1 18.099 0.0 0.0 1.0549 0.0 0.0 1569.702377595199 0.0 1569.702377595199 0.0 10.039237471316296 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 Q 1.0549 - 153 + 1 3.283 39451.8 0.3899999856948852 45 1950 1995 HBL1_DMSO_200M_050219_2,1997 HBL1_DMSO_200M_050219_2,1997, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2003 8.3413 800.0 16645.0 25 0 2041.5 -1 0 34 601.9422247306707 1802.804844792212 3 601.9429809451103 MULTI CID FTMS 0 0 0 2002 73443.4765625 0.8029988884495532 1 -0.0302076339721679 1 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WY]ANT 7 -1 8.2045 0.0 0.0 0.4551 0.0 0.0 0.0 930.3963114272304 930.3963114272304 8.204482088348117 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WY]ANT 0.4551 - 32 1 3.283 19146.9 0.4300000071525574 46 1955 2002 HBL1_DMSO_200M_050219_2,2003 HBL1_DMSO_200M_050219_2,2003, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2004 8.3551 800.0 110860.0 25 0 7489.0 + 35653 SVDARMREEK 10 91 610.8046768258323 1219.5948007184645 2 610.8046142458916 MULTI CID FTMS 0 0 0 2002 94145.015625 0.4973409800585885 -4 0.0159797668457031 2 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 40.23920728925047 0.1550410903091231 4 [VS]QHHVDAAEK 11 -1 + 129.9 0.0 0.0 10.651 10.651 93.121 0.0 0.0 0.0 11.780904172694989 11.780904172694989 11.780904172694989 9.128498242811006 0 3.929174692824113 2.0 0.8807196863200843 1.1861818737241734 [VS]QHHVDAAEK;[VS][AG]HHVDAAEK;[VS]AGHHVDAAEK;[VS]AGHHVD[DV]GK;[VS]QHHA[DV]AEK;[VS]AGHHVDAAA[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHHVDAAEK;WQ{[MS]|[{M(Oxidation (M))|F}A]}V[NG]AAEK;WQHHVWAEK;[VS][AG]HHA[DV]AEK 10.651;9.9027;9.6852;8.2733;8.2111;8.1997;7.5822;7.5575;7.5009;7.4626 -;-;-;-;-;-;-;-;-;- 6252 + 1 3.283 73124.3 0.4399999976158142 47 1955 2002 HBL1_DMSO_200M_050219_2,2004 HBL1_DMSO_200M_050219_2,2004,SVDARMREEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2007 8.3703 491.0 263580.0 25 0 18199.0 -1 0 88 461.2357455394767 1840.9138762915068 4 461.2360107302666 MULTI CID FTMS 0 0 0 2006 86606.9375 0.3356696834993329 15 -0.0930042266845703 1 4 QN 2 -1 16.454 0.0 0.0 0.89378 0.0 0.0 1580.7575750871652 0.0 1580.7575750871652 0.0 3.2538002569939533 0.0 0.0 0 0.0 0.0 0.0 0.0 QN 0.89378 - 36 1 3.303 105210.0 1.0 48 1957 2006 HBL1_DMSO_200M_050219_2,2007 HBL1_DMSO_200M_050219_2,2007, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2010 8.3907 800.0 196250.0 25 0 18579.0 + -1 SVAMLVPRHW 10 169 404.5508064266394 1210.630589880118 3 404.5506469607353 MULTI CID FTMS 0 0 0 2009 122963.71875 0.6464851538097935 -11 0.1037569046020507 1 Oxidation (M) _SVAM(Oxidation (M))LVPRHW_ REV__ENSG00000162572|ENST00000379116|SCNN1D;REV__nc|ENSG00000162572|P51172-1|SCNN1D;REV__nc|ENSG00000162572|P51172-2|SCNN1D 21.59015148037692 0.4836074274810599 4 SVQHVDAAEKK 11 -1 + 103.76 0.0 0.0 8.5703 8.5703 91.735 0.0 0.0 0.0 81.6397534144156 16.932441950699754 16.932441950699754 9.128498242810991 0 0.9134117563873404 2.0 0.5 0.7742275032520141 SVQHVDAAEKK;SV[AG]HVDAAEKK;SVQHVDAK{[CP]|[EA]}K;SVQHVWK{[CP]|[EA]}K;SV[AG]HVDAK{[CP]|[EA]}K;SVQHVKAD{[CP]|[EA]}K;WQHVWAEKK;SV[AG]HVWK{[CP]|[EA]}K;SVQHVK{M(Oxidation (M))|F}{[ET]|[MV]}H;SV[AG]HVKAD{[CP]|[EA]}K 8.5703;7.8163;6.9051;6.2597;6.151;5.9769;5.6442;5.5027;5.2937;5.2228 -;-;-;-;-;-;-;-;-;- 1475 + 1 3.303 124175.2 0.6000000238418579 49 1959 2009 HBL1_DMSO_200M_050219_2,2010 HBL1_DMSO_200M_050219_2,2010,SVAMLVPRHW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2011 8.4046 800.0 76139.0 25 0 5602.1 43218 WANYSAEQN 9 98 541.728595765326 1081.4426385974518 2 541.7282592654228 MULTI CID FTMS 0 0 0 2009 89712.2109375 1.0 0 0.0 2 Unmodified _WANYSAEQN_ ENSG00000152661|ENST00000282561|GJA1 19.256988751693697 0.3154191944385105 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAED[{M(Oxidation (M))|F}V]N 9 7 + 49.983 0.0 0.0 4.6219 4.6219 77.676 0.0 0.0 0.0 7.147642715192504 7.526202187463085 7.147642715192504 7.526202187463085 0 0.3054621874040891 0.0 0.805462187404089 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAED[{M(Oxidation (M))|F}V]N;[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]AED[{M(Oxidation (M))|F}V]N;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAED[MT]Q;[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EA[AG]QN;[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]AED[MT]Q;{[VA]|[{I|L}G]}[YC(Carbamidomethyl (C))]EAQQN;[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EA[AG]QN;{[VA]|[{I|L}G]}[YC(Carbamidomethyl (C))]EA[AG]QN 4.6219;3.926;3.7704;3.4394;3.0785;3.0272;2.588;2.5495;2.1757;1.698 -;-;-;-;-;-;-;-;-;- 207 + 1 3.303 50489.6 0.4399999976158142 50 1959 2009 HBL1_DMSO_200M_050219_2,2011 HBL1_DMSO_200M_050219_2,2011,WANYSAEQN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2045 8.537 85.0 552260.0 25 0 90522.0 + 37286 TIQESEVSAEK 11 78 407.5387902468874 1219.5945413408622 3 407.5386840701103 MULTI CID FTMS 0 0 0 2044 609131.5625 0.3960290973006921 31 -0.1251201629638672 1 Unmodified _TIQESEVSAEK_ REV__ENSG00000144395|ENST00000389175|CCDC150 17.44264345198275 0.6723198055858692 4 [VS]AGHHVDAAEK 12 -1 [VS]AG + + 49.378 26.788 8.5269 4.0487 4.0487 48.821 0.0 0.0 0.0 0.0 21.42937376799709 0.0 0.0 0 0.7742275032520141 0.0 0.3807196863200844 0.3494850021680094 [VS]AGHHVDAAEK 4.0487 - 200 + 1 3.355 44906.0 1.0 51 1992 2044 HBL1_DMSO_200M_050219_2,2045 HBL1_DMSO_200M_050219_2,2045,TIQESEVSAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2095 8.7452 760.0 330420.0 25 0 21976.0 -1 0 288 303.1726391630675 302.1653626964675 1 303.1702453494072 MULTI CID FTMS 0 0 0 2094 103289.9609375 0.4877193260744782 -30 0.1202030181884765 1 4 K 1 -1 13.518 0.0 0.0 4.4736 0.0 0.0 156.0598919706847 0.0 156.0598919706847 0.0 1.5279714663161883 0.0 0.0 0 0.0 0.0 0.0 0.1923877696554315 K 4.4736 - 48 + 1 3.4 194825.8 1.0 52 2041 2094 HBL1_DMSO_200M_050219_2,2095 HBL1_DMSO_200M_050219_2,2095, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2107 8.8016 800.0 128000.0 25 0 11927.0 + 16640 KEKEEDLSDK 10 133 407.5387902468874 1219.5945413408622 3 407.5389282107353 MULTI CID FTMS 0 0 0 2106 86853.4453125 0.056468082861105 91 -0.4444952011108398 1 Unmodified _KEKEEDLSDK_ REV__CON__ENSEMBL:ENSBTAP00000031900 8.745405648335112 0.6861838735306406 4 [VS]AM[SG]VHH 9 -1 32.519 0.0 0.0 2.6664 0.0 0.0 0.0 311.1379883179296 311.1379883179296 14.662443757583304 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.2742275032520141 0.0 [VS]AM[SG]VHH 2.6664 - 555 1 3.42 83004.6 0.4699999988079071 53 2052 2106 HBL1_DMSO_200M_050219_2,2107 HBL1_DMSO_200M_050219_2,2107,KEKEEDLSDK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2115 8.8358 433.0 238540.0 25 0 25997.0 + 33350 SGGPAQAP 8 146 342.6694655941596 683.3243782551192 2 342.6692077517509 MULTI CID FTMS 0 0 0 2114 87906.9296875 0.2670175377813131 -58 0.2565803527832031 1 Unmodified _SGGPAQAP_ ENSG00000111249|ENST00000261726|CUX2 24.67388899826682 0.525179942228231 4 [VS]QHVD 6 7 + 25.845 0.0 0.0 3.7823 3.7823 67.509 0.0 0.0 0.0 13.009813192896296 2.2469659248918283 2.2469659248918283 2.2469659248918283 0 0.0 2.0 0.5 0.4247425010840047 [VS]QHVD;[VS]Q[DV]H;[VS]QHDV;[HQ]VDSV;[EP][RD][PA];[VS][AG]HVD;[VS][AG][DV]H;[HV]QDSV;[VS][AG]HDV 3.7823;3.4535;3.1629;2.7715;1.7868;1.7821;1.4533;1.1997;1.1628 -;-;-;-;-;-;-;-;- 96 + 1 3.42 82790.2 1.0 54 2059 2114 HBL1_DMSO_200M_050219_2,2115 HBL1_DMSO_200M_050219_2,2115,SGGPAQAP False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2127 8.8923 800.0 99566.0 25 0 13592.0 + 11978 GPEAGRKPA 9 103 441.7431028235763 881.4716527139526 2 441.7435485720634 MULTI CID FTMS 0 0 0 2126 88067.046875 0.4816574964759891 -21 0.1025686264038086 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 57.72198328787511 0.0273433238377839 4 GPEAS 5 5 73.443 0.0 0.0 8.3319 0.0 0.0 0.0 437.26674773063263 437.26674773063263 48.979400086720375 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.5 0.0 GPEAS 8.3319 - 164 + 1 3.441 65707.2 0.4300000071525574 55 2070 2126 HBL1_DMSO_200M_050219_2,2127 HBL1_DMSO_200M_050219_2,2127,GPEAGRKPA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2142 8.9501 169.0 466950.0 25 0 119930.0 + -1 RKHKMYRKK 9 75 430.9232495300931 1289.7479191904793 3 430.8882324099541 MULTI CID FTMS 0 0 0 2141 187087.1875 0.6780945904343967 24 -0.1136789321899414 1 Oxidation (M) _RKHKM(Oxidation (M))YRKK_ REV__ENSG00000005206|ENST00000613503|SPPL2B;REV__nc|ENSG00000005206|Q8TCT7-2|SPPL2B;REV__nc|ENSG00000005206|Q8TCT7-4|SPPL2B 4.897010918128616 0.7437319958283661 4 K 1 -1 15.986 0.0 0.0 1.2395 0.0 0.0 1143.6421432889151 0.0 1143.6421432889151 0.0 4.749073637206092 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 K 1.2395 + + 37 + 1 3.46 68251.9 1.0 56 2084 2141 HBL1_DMSO_200M_050219_2,2142 HBL1_DMSO_200M_050219_2,2142,RKHKMYRKK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2160 9.0215 246.0 369260.0 25 0 36901.0 -1 0 136 303.1726391630675 302.1653626964675 1 303.1701537966728 MULTI CID FTMS 0 0 0 2159 176670.6875 0.8342118426857862 30 -0.1673307418823242 1 4 K 1 -1 13.966 0.0 0.0 4.6219 0.0 0.0 156.05986145310658 0.0 156.05986145310658 0.0 3.1284570705347914 0.0 0.0 0 0.0 0.0 0.0 0.1747425010840047 K 4.6219 - 28 + 1 3.473 74692.6 1.0 57 2101 2159 HBL1_DMSO_200M_050219_2,2160 HBL1_DMSO_200M_050219_2,2160, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2166 9.0538 800.0 148040.0 25 0 21269.0 13723 HQSVYPFSQK 10 144 407.5389407147383 1219.5949927444149 3 407.5390502810478 MULTI CID FTMS 0 0 0 2165 98700.890625 0.5169856167204315 -15 0.0633497238159179 1 Unmodified _HQSVYPFSQK_ ENSG00000075407|ENST00000685332|ZNF37A 9.38312468134398 0.6832340498775793 4 [WQ]HHVD 6 9 43.148 0.0 0.0 3.5379 0.0 0.0 0.0 414.2003158318129 414.2003158318129 19.917665879116623 0.0 0.0 0.0 0 0.7742275032520141 1.0 0.0 0.0 [WQ]HHVD 3.5379 - 256 + 1 3.473 100219.1 0.449999988079071 58 2106 2165 HBL1_DMSO_200M_050219_2,2166 HBL1_DMSO_200M_050219_2,2166,HQSVYPFSQK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2169 9.0701 551.0 186650.0 25 0 22876.0 + 16645 KEKIGHDEQK 10 129 404.5505577439342 1210.6298438320025 3 404.5506774783134 MULTI CID FTMS 0 0 0 2168 66633.25 0.5248153451578149 -13 0.0677938461303711 1 Unmodified _KEKIGHDEQK_ REV__ENSG00000050327|ENST00000056217|ARHGEF5;REV__ENSG00000213214|ENST00000378115|ARHGEF35 9.764250979337303 0.6814711177547602 4 SVQHVDAAEKK 11 -1 + 78.937 0.0 0.0 6.5204 6.5204 86.408 0.0 0.0 0.0 46.4323108862295 16.49221380306055 16.49221380306055 8.967137774837596 0 0.1989700043360188 2.0 0.4247425010840047 0.2302046884880938 SVQHVDAAEKK;SVQHVDA{[TV]|[{I|L}S]}QK;SVQHVDAK{[CP]|[EA]}K;SVQHVDA{[TV]|[{I|L}S]}KQ;SVQHVDAKS{I|L}Q;SVQHVWK{[CP]|[EA]}K;[WQ]HVWAEKK;SVQHVD[KT]G{I|L}Q;SVQHVWK[KC]P;SVQHV[KA]DS{I|L}Q 6.5204;5.7797;4.9725;4.8434;4.4451;4.4294;3.6212;3.5813;3.2925;3.1449 -;-;-;-;-;-;-;-;-;- 1022 + 1 3.473 83753.7 1.0 59 2108 2168 HBL1_DMSO_200M_050219_2,2169 HBL1_DMSO_200M_050219_2,2169,KEKIGHDEQK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2173 9.0848 213.0 414490.0 25 0 64133.0 + 33351 SGGPAQAP 8 119 342.6694655941596 683.3243782551192 2 342.6690856814384 MULTI CID FTMS 0 0 0 2172 257412.296875 0.7818905511833446 -6 0.0447635650634765 1 Unmodified _SGGPAQAP_ ENSG00000111249|ENST00000261726|CUX2 18.13498045792455 0.6430038125133779 4 [VS]QHVD 6 7 + 33.266 0.0 0.0 4.8682 4.8682 83.439 0.0 0.0 0.0 19.2959267825988 13.855698634959593 13.855698634959593 13.667505541063177 0 0.3807196863200844 2.0 0.5 0.4247425010840047 [VS]QHVD;[VS][AG]HVD;[HQ]VD[VS];[HV]QD[VS];[HQ]VVSD;[EP][RD]AP;[HV]QVSD;[PA][NS]QAP;[HV][AG]D[VS];[NS][PA]QAP 4.8682;2.8681;2.8405;2.2506;2.0444;1.9082;1.4545;0.89815;0.36061;0.3468 -;-;-;-;-;-;-;-;-;- 90 + 1 3.473 76861.0 1.0 60 2111 2172 HBL1_DMSO_200M_050219_2,2173 HBL1_DMSO_200M_050219_2,2173,SGGPAQAP False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2174 9.0931 468.0 238020.0 25 0 18779.0 + 9780 FNIYNVGK 8 154 318.8380741006073 0 318.8380004763603 PEAK CID FTMS 0 0 0 2172 88002.96875 1.0 0 0.0 2 Unmodified _FNIYNVGK_ REV__ENSG00000214595|ENST00000356458|EML6;REV__nc|ENSG00000214595|Q6ZMW3-2|EML6 6.723162845929126 0.5749384031518959 4 S 1 -1 6.7217 0.0 0.0 1.0574 0.0 0.0 477.5559109191849 68.0512941949828 545.6072051141678 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1237125054200235 0.0 S 1.0574 - 12 + 1 3.473 93863.3 1.0 61 2111 2172 HBL1_DMSO_200M_050219_2,2174 HBL1_DMSO_200M_050219_2,2174,FNIYNVGK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2185 9.1455 800.0 80471.0 25 0 10179.0 + 11979 GPEAGRKPA 9 98 441.7431028235763 881.4716527139526 2 441.7427551150322 MULTI CID FTMS 0 0 0 2184 55736.31640625 0.3048338234973656 30 -0.1329097747802734 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 43.77239144664712 0.0547478964384323 4 GPEAS 5 5 71.498 0.0 0.0 8.1112 0.0 0.0 0.0 437.2681258376926 437.2681258376926 57.54554718523508 0.0 0.0 0.0 0 1.6549471895720984 2.0 0.0 0.0 GPEAS 8.1112 - 132 + 1 3.473 54348.0 0.4199999868869781 62 2121 2184 HBL1_DMSO_200M_050219_2,2185 HBL1_DMSO_200M_050219_2,2185,GPEAGRKPA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2220 9.2879 405.0 335340.0 25 0 30870.0 -1 0 177 303.1726391630675 302.1653626964675 1 303.1702453494072 MULTI CID FTMS 0 0 0 2219 162585.15625 0.7677021282246891 84 -0.432866096496582 1 4 K 1 -1 14.754 0.0 0.0 4.8827 0.0 0.0 156.05972412400502 0.0 156.05972412400502 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.1989700043360188 K 4.8827 - 26 + 1 3.499 109140.8 1.0 63 2155 2219 HBL1_DMSO_200M_050219_2,2220 HBL1_DMSO_200M_050219_2,2220, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2226 9.3202 800.0 103210.0 25 0 15792.0 + -1 HNEGIERCM 9 137 387.8290612468799 1160.4653543408397 3 387.8294860720634 MULTI CID FTMS 0 0 0 2225 99666.2890625 0.9072561303136896 -17 0.074106216430664 1 Carbamidomethyl (C),Oxidation (M) _HNEGIERC(Carbamidomethyl (C))M(Oxidation (M))_ REV__ENSG00000104133|ENST00000261866|SPG11;REV__ENST00000561268.5_1_15:44859616-44864898:-|nuORF;REV__nc|ENSG00000104133|Q96JI7-3|SPG11 8.155526934196011 0.6299788542272896 4 {[QS]|[NT]}[TA]{[C(Carbamidomethyl (C))E]|[WC]}STM{M(Oxidation (M))|F} 10 -1 {[QS]|[NT]}[TA]{[C(Carbamidomethyl (C))E]|[WC]}STM + + 16.99 6.3335 0.63626 1.464 1.464 44.318 0.0 0.0 0.0 0.0 -5.713337517843655 -5.713337517843655 0.0 0 0.0 0.0 0.0 0.0 {[QS]|[NT]}[TA]{[C(Carbamidomethyl (C))E]|[WC]}STM{M(Oxidation (M))|F} 1.464 - 339 + 1 3.499 72455.4 0.4300000071525574 64 2160 2225 HBL1_DMSO_200M_050219_2,2226 HBL1_DMSO_200M_050219_2,2226,HNEGIERCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2231 9.3404 297.0 344830.0 25 0 62576.0 33352 SGGPAQAP 8 124 342.6694655941596 683.3243782551192 2 342.6691772341728 MULTI CID FTMS 0 0 0 2230 280619.03125 0.8523810699033789 47 -0.2010154724121093 1 Unmodified _SGGPAQAP_ ENSG00000111249|ENST00000261726|CUX2 18.13498045792455 0.6430038125133779 4 [VS]QHVD 6 7 + 41.392 0.0 0.0 6.0575 6.0575 84.063 0.0 0.0 0.0 11.161764699893062 8.061799739838868 8.061799739838868 8.061799739838868 0 0.7742275032520141 2.0 0.4247425010840047 0.5 [VS]QHVD;[VS]QHDV;[VS]HQVD;[VS][AG]HVD;[VS]{[CA]|SS}HAP;[VS]H[AG]VD;[VS]H{[CA]|SS}AP;[VS][AG]HDV;[HQ]VSVD;[HQ]VDSV 6.0575;4.8777;4.424;3.9472;3.1698;3.0454;2.8702;2.7674;2.5882;2.4214 -;-;-;-;-;-;-;-;-;- 119 + 1 3.499 82961.1 1.0 65 2164 2230 HBL1_DMSO_200M_050219_2,2231 HBL1_DMSO_200M_050219_2,2231,SGGPAQAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2272 9.5039 259.0 266890.0 25 0 104710.0 -1 0 59 424.21785191560656 423.21057544900657 1 424.2180663943291 MULTI CID FTMS 0 0 0 2271 274290.0 0.2080339055295956 240 -1.2473983764648438 1 4 S 1 -1 1.1092 0.0 0.0 0.2621 0.0 0.0 265.1050436880675 68.0512941949828 333.1563378830503 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.2621 - 2 + 1 3.499 61140.7 1.0 66 2204 2271 HBL1_DMSO_200M_050219_2,2272 HBL1_DMSO_200M_050219_2,2272, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2276 9.5214 379.0 292200.0 25 0 61092.0 + 4119 DAPAGRKV 8 101 407.2324846494959 812.4504163657917 2 407.2325622439384 MULTI CID FTMS 0 0 0 2275 200451.9375 0.007607144426645 -49 0.2160797119140625 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 21.74664581756881 0.5868176546531598 4 DAPA 4 4 58.488 0.0 0.0 7.1989 0.0 0.0 0.0 455.27269330891664 455.27269330891664 45.515536808608886 0.0 0.0 0.0 0 0.6549471895720985 2.0 0.0 0.0 + DAPA 7.1989 + + 58 + 1 3.499 90758.8 1.0 67 2207 2275 HBL1_DMSO_200M_050219_2,2276 HBL1_DMSO_200M_050219_2,2276,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2281 9.5478 683.0 97141.0 25 0 29678.0 -1 0 70 495.1287913792795 494.1215149126795 1 495.1290161013603 MULTI CID FTMS 0 0 0 2280 87319.0703125 0.6222553455595601 -9 0.0448036193847656 1 4 H 1 -1 12.474 0.0 0.0 2.5245 0.0 0.0 339.05187182361544 0.0 339.05187182361544 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 H 2.5245 - 4 + 1 3.499 57793.2 1.0 68 2211 2280 HBL1_DMSO_200M_050219_2,2281 HBL1_DMSO_200M_050219_2,2281, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2290 9.5923 800.0 177420.0 25 0 122760.0 + 6706 ECSDCRIGFKA 11 42 614.7771827430464 0 614.7770873904228 PEAK CID FTMS 0 0 0 2289 178365.109375 0.2803317006920864 164 -0.8590507507324219 1 Unmodified _ECSDCRIGFKA_ REV__ENSG00000163995|ENST00000447017|ABLIM2;REV__nc|ENSG00000163995|Q6H8Q1-2|ABLIM2;REV__nc|ENSG00000163995|Q6H8Q1-3|ABLIM2;REV__nc|ENSG00000163995|Q6H8Q1-5|ABLIM2;REV__nc|ENSG00000163995|Q6H8Q1-6|ABLIM2;REV__nc|ENSG00000163995|Q6H8Q1-7|ABLIM2;REV__nc|ENSG00000163995|Q6H8Q1-8|ABLIM2;REV__nc|ENSG00000163995|Q6H8Q1|ABLIM2 1.0714618166137932 0.4761840153648598 4 {M(Oxidation (M))|F} 1 -1 1.5938 0.0 0.0 0.12984 0.0 0.0 847.459503570274 230.02907739810783 1077.488580968382 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.12984 + + 1 + 1 3.499 112243.7 0.6499999761581421 69 2219 2289 HBL1_DMSO_200M_050219_2,2290 HBL1_DMSO_200M_050219_2,2290,ECSDCRIGFKA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2292 9.5999 198.0 392390.0 25 0 76012.0 + 33353 SGGPAQAP 8 101 342.6694655941596 683.3243782551192 2 342.6690856814384 MULTI CID FTMS 0 0 0 2291 256578.734375 0.7793586028246877 103 -0.5785923004150391 1 Unmodified _SGGPAQAP_ ENSG00000111249|ENST00000261726|CUX2 18.13498045792455 0.6430038125133779 4 [VS]QHVD 6 7 + 36.842 0.0 0.0 5.3916 5.3916 85.85 0.0 0.0 0.0 24.62363034904884 6.133820676033515 6.133820676033515 14.420080530223125 0 0.4247425010840047 2.0 0.4247425010840047 0.5 [VS]QHVD;[VS][AG]HVD;[HQ]VD[VS];[HV]QD[VS];[EP][RD]AP;[NS][PA]QAP;[TP][NG]QAP;[HV][AG]D[VS] 5.3916;3.2813;2.4457;1.9407;1.6011;0.60367;0.19946;0.0049448 -;-;-;-;-;-;-;- 67 + 1 3.517 67978.3 1.0 70 2220 2291 HBL1_DMSO_200M_050219_2,2292 HBL1_DMSO_200M_050219_2,2292,SGGPAQAP False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2293 9.6076 433.0 149660.0 25 0 8109.9 + 12165 GQNDIHHKV 9 106 349.84895163997214 1046.5250255201163 3 349.8491088747978 MULTI CID FTMS 0 0 0 2291 91694.1953125 0.4674148501701503 -15 0.0883350372314453 2 Unmodified _GQNDIHHKV_ ENSG00000138757|ENST00000359707|G3BP2;nc|ENSG00000138757|Q9UN86-2|G3BP2 10.823927491677226 0.5436922275383211 4 W 1 9 11.594 0.0 0.0 1.1078 0.0 0.0 842.4352560882791 0.0 842.4352560882791 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1078 - 78 + 1 3.517 60441.8 1.0 71 2220 2291 HBL1_DMSO_200M_050219_2,2293 HBL1_DMSO_200M_050219_2,2293,GQNDIHHKV False False GQNDIHHKV 9.6075974 349.849108874798 954019.4375 2291.0 ENSG00000138757|ENST00000359707|G3BP2;;nc|ENSG00000138757|Q9UN86-2|G3BP2 4.332712968190511 3.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2294 9.6214 800.0 91470.0 25 0 5879.8 + 41932 VQHVDAAEK 9 101 498.75932960214016 995.5041062710804 2 498.7592040896416 MULTI CID FTMS 0 0 0 2291 87323.9296875 0.7630847363090607 -16 0.0956850051879882 3 Unmodified _VQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 36.39500950444726 0.095246261068787 4 {[QV]|[N{I|L}]|[RA]|[KV]}HVDAAEK 9 0 + 65.046 0.0 0.0 6.534 6.534 92.076 0.0 0.0 0.0 23.156753288559813 17.345143534448013 17.345143534448013 27.86297847284061 0 1.0 1.0 0.2742275032520141 0.3252574989159953 + + {[QV]|[N{I|L}]|[RA]|[KV]}HVDAAEK;{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{[MS]|[{M(Oxidation (M))|F}A]}K;{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{M(Oxidation (M))|F}EK;{[QV]|[N{I|L}]|[RA]|[KV]}HHH[NP]K;{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AA[W{M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}[RN]{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}] 6.534;3.7351;3.623;3.5296;1.9189;1.5315 +;-;-;-;-;- + 231 + 1 3.517 61859.6 0.4000000059604645 72 2220 2291 HBL1_DMSO_200M_050219_2,2294 HBL1_DMSO_200M_050219_2,2294,VQHVDAAEK True True VQHVDAAEK 9.6214118 498.759204089642 1722176.25 2291.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 6.821791648864746 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2299 9.6415 310.0 292570.0 25 0 36376.0 + 41933 VQHVDAAEK 9 117 332.8420070785305 995.5041918357916 3 332.8415099978447 MULTI CID FTMS 0 0 0 2298 174545.765625 0.6753931858071608 -4 0.0410842895507812 1 Unmodified _VQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 29.28111348798908 0.1586252267974456 4 {[QV]|[N{I|L}]|[RA]|[KV]}HVDAAEK 9 0 + 51.679 0.0 0.0 5.1912 5.1912 74.303 0.0 0.0 0.0 7.147642715192504 17.066949718158774 7.147642715192504 3.0102999566398125 0 0.6549471895720984 0.0 0.3494850021680094 0.3252574989159953 + + {[QV]|[N{I|L}]|[RA]|[KV]}HVDAAEK;{[QV]|[N{I|L}]|[RA]|[KV]}HVADAEK;{[QV]|[N{I|L}]|[RA]|[KV]}HV{[CP]|[EA]}GEK;{[QV]|[N{I|L}]|[RA]|[KV]}HVDAAKE;{[QV]|[N{I|L}]|[RA]|[KV]}HVADAKE;{[QV]|[N{I|L}]|[RA]|[KV]}HV{[CP]|[EA]}GKE;{[QV]|[N{I|L}]|[RA]|[KV]}HV{[TV]|[{I|L}S]}{[QG]|[NA]}E 5.1912;4.8888;4.6858;3.4768;3.1744;2.9714;1.243 +;-;-;-;-;-;- + 462 + 1 3.517 78022.4 1.0 73 2224 2298 HBL1_DMSO_200M_050219_2,2299 HBL1_DMSO_200M_050219_2,2299,VQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2302 9.6503 106.0 953080.0 25 0 237080.0 -1 0 84 314.2006483681656 626.3867438031313 2 314.2002746462822 MULTI CID FTMS 0 0 0 2301 558734.4375 0.2766433708305913 -30 0.1810884475708007 1 4 PAV 3 -1 46.114 0.0 0.0 7.362 0.0 0.0 0.0 356.2044771783813 356.2044771783813 20.662292754165623 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 PAV 7.362 - 24 + 1 3.517 88117.6 1.0 74 2226 2301 HBL1_DMSO_200M_050219_2,2302 HBL1_DMSO_200M_050219_2,2302, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2309 9.6877 800.0 93264.0 25 0 13495.0 -1 0 39 542.5259085080428 2166.074528165771 4 542.7774536013603 MULTI CID FTMS 0 0 0 2308 76375.75 0.5918418645063521 -3 0.0117378234863281 1 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 3.513 67093.9 0.449999988079071 75 2232 2308 HBL1_DMSO_200M_050219_2,2309 HBL1_DMSO_200M_050219_2,2309, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2324 9.7467 327.0 286290.0 25 0 22961.0 + 35972 SVQHAWWV 8 118 338.1725904639469 1011.4959419920408 3 338.1718017458916 MULTI CID FTMS 0 0 0 2323 161225.75 0.7107197829609196 -5 0.0195035934448242 1 Unmodified _SVQHAWWV_ REV__ENST00000434116.6_1_15:65916409-65944223:+|nuORF 10.183394434864962 0.7604730176254005 4 [VS]P{[{M(Oxidation (M))|F}C]|[YS]}Q{M(Oxidation (M))|F}[KG] 9 -1 + 30.581 0.0 0.0 3.0233 3.0233 45.978 0.0 0.0 0.0 12.724243497422169 -16.989700043360184 -16.989700043360184 0.0 0 0.0 2.0 0.0 0.0 [VS]P{[{M(Oxidation (M))|F}C]|[YS]}Q{M(Oxidation (M))|F}[KG];[VS][{M(Oxidation (M))|F}E]AQ{M(Oxidation (M))|F}[KG];[VS][{M(Oxidation (M))|F}E]A[AG]{M(Oxidation (M))|F}[KG];[VS]P{[{M(Oxidation (M))|F}C]|[YS]}[AG]{M(Oxidation (M))|F}[KG] 3.0233;3.0233;2.113;2.113 -;-;-;- 172 1 3.513 78989.7 1.0 76 2246 2323 HBL1_DMSO_200M_050219_2,2324 HBL1_DMSO_200M_050219_2,2324,SVQHAWWV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2329 9.7745 800.0 41459.0 25 0 10559.0 -1 0 54 637.9460117275253 1910.816205782776 3 637.9467040896416 MULTI CID FTMS 0 0 0 2328 23609.78125 0.2930092511570612 -3 0.011566162109375 1 4 H 1 -1 16.99 0.0 0.0 0.88913 0.0 0.0 1755.7462727767193 0.0 1755.7462727767193 0.0 12.385606273598311 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.88913 - 33 + 1 3.513 34437.6 0.5299999713897705 77 2250 2328 HBL1_DMSO_200M_050219_2,2329 HBL1_DMSO_200M_050219_2,2329, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2331 9.7791 2.8 21517000.0 25 0 6869700.0 + 4120 DAPAGRKV 8 48 407.2324846494959 812.4504163657917 2 407.2326537966728 MULTI CID FTMS 0 0 0 2330 23405054.0 0.8882210285017915 -5 0.0360355377197265 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 21.74664581756881 0.5868176546531598 4 DAPA 4 4 59.993 0.0 0.0 7.3842 0.0 0.0 0.0 455.27363001041255 455.27363001041255 54.50827206916173 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + DAPA 7.3842 + + 18 + 1 3.513 54235.5 1.0 78 2251 2330 HBL1_DMSO_200M_050219_2,2331 HBL1_DMSO_200M_050219_2,2331,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2335 9.803 800.0 183790.0 25 0 16168.0 -1 0 82 434.22212911182487 2166.0742632261245 5 434.2232543826103 MULTI CID FTMS 0 0 0 2334 78030.3203125 0.736810217026686 13 -0.1161346435546875 1 4 H 1 -1 13.495 0.0 0.0 0.62301 0.0 0.0 2011.004498066748 0.0 2011.004498066748 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.62301 - 42 + 1 3.513 119509.7 0.6299999952316284 79 2254 2334 HBL1_DMSO_200M_050219_2,2335 HBL1_DMSO_200M_050219_2,2335, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2336 9.8168 800.0 116070.0 25 0 6208.0 + 41664 VPQGQRDYMA 10 137 388.8546982246965 0 388.8541747927666 PEAK CID FTMS 0 0 0 2334 76595.6640625 1.0 0 0.0 2 Unmodified _VPQGQRDYMA_ REV__ENSG00000088881|ENST00000609451|EBF4;REV__ENST00000609967.5_1_20:2674291-2732741:+|nuORF;REV__nc|ENSG00000088881|Q9BQW3-1|EBF4 3.072263186857199 0.3961065659209837 4 Q 1 -1 6.9897 0.0 0.0 0.90109 0.0 0.0 65.41019639127587 579.2011812799436 644.6113776712195 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.90109 + + 15 + 1 3.513 79362.0 0.5799999833106995 80 2254 2334 HBL1_DMSO_200M_050219_2,2336 HBL1_DMSO_200M_050219_2,2336,VPQGQRDYMA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2339 9.8368 800.0 280460.0 25 0 51797.0 -1 0 162 349.7189093526609 697.4232657721218 2 349.7188598513603 MULTI CID FTMS 0 0 0 2338 106094.921875 0.8121194390840303 1 -0.0161495208740234 1 4 APA{[NV]|[RG]}KV 7 -1 + 64.957 0.0 0.0 9.3138 9.3138 88.566 0.0 0.0 0.0 36.32023214705406 4.795567511425169 4.795567511425169 4.795567511425169 0 0.6382104921644451 2.0 0.0 0.8609243748081782 APA{[NV]|[RG]}KV;APA{[NV]|[RG]}VK 9.3138;8.6262 -;- 138 + 1 3.513 176032.3 0.6499999761581421 81 2256 2338 HBL1_DMSO_200M_050219_2,2339 HBL1_DMSO_200M_050219_2,2339, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2345 9.8685 800.0 142480.0 25 0 10545.0 + -1 GSSHLLWWCQR 11 160 368.6794169380846 1470.6885618859385 4 368.6794006228447 MULTI CID FTMS 0 0 0 2344 42807.42578125 0.4634663594343755 1 -0.0161561965942382 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))GSSHLLWWC(Carbamidomethyl (C))QR_ REV__ENST00000471252.1_1_Y:16634522-16634672:+|nuORF 2.6312355333042263 0.8627335947654684 4 {M(Oxidation (M))|F}QR 3 -1 17.409 0.0 0.0 1.1837 0.0 0.0 1021.4500554307998 0.0 1021.4500554307998 0.0 3.914412723804549 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 {M(Oxidation (M))|F}QR 1.1837 - 157 + 1 3.497 91186.1 0.5899999737739563 82 2261 2344 HBL1_DMSO_200M_050219_2,2345 HBL1_DMSO_200M_050219_2,2345,GSSHLLWWCQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2350 9.8854 147.0 415350.0 25 0 125790.0 28700 PVSELTDT 8 60 431.2138625905581 0 430.8882018923759 PEAK CID FTMS 0 0 0 2349 29051.4921875 0.4597379662807732 -1 0.0039901733398437 1 Unmodified _PVSELTDT_ ENSG00000159433|ENST00000290607|STARD9 14.581692164780916 0.4900557725783909 4 V 1 7 3.9794 0.0 0.0 0.4625 0.0 0.0 430.2047504723287 328.1149080865844 758.3196585589131 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.4625 + + 4 + 1 3.497 56720.6 1.0 83 2265 2349 HBL1_DMSO_200M_050219_2,2350 HBL1_DMSO_200M_050219_2,2350,PVSELTDT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2351 9.8992 800.0 178050.0 25 0 14755.0 + 42262 VSPGNGGP 8 184 342.6694655941596 683.3243782551192 2 342.6692687869072 MULTI CID FTMS 0 0 0 2349 85353.390625 0.2592611559406434 148 -0.7192201614379883 2 Unmodified _VSPGNGGP_ REV__ENSG00000144283|ENST00000389759|PKP4;REV__ENST00000480171.7_1_2:159519375-159537186:+|nuORF;REV__ENST00000486254.3_1_2:159526197-159533456:+|nuORF;REV__nc|ENSG00000144283|Q99569-2|PKP4 5.760428011301431 0.7893668129297577 4 [HQ]VD[VS] 6 -1 + 14.543 0.0 0.0 2.1282 2.1282 74.647 0.0 0.0 0.0 4.265130749205889 5.210411930306133 4.265130749205889 9.49863924718144 0 0.0 0.0 0.0 0.7887254899964358 [HQ]VD[VS];[HV]QD[VS];{[QV]|[N{I|L}]|[RA]|[KV]}HD[VS] 2.1282;0.73817;0.2029 -;-;- 82 1 3.497 116365.5 0.6499999761581421 84 2265 2349 HBL1_DMSO_200M_050219_2,2351 HBL1_DMSO_200M_050219_2,2351,VSPGNGGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2354 9.9076 38.0 2432100.0 25 0 683740.0 -1 0 73 314.2006483681656 626.3867438031313 2 314.2002441287041 MULTI CID FTMS 0 0 0 2353 1744804.0 0.863896025737091 11 -0.0440959930419921 1 4 PAV 3 -1 48.5 0.0 0.0 7.7428 0.0 0.0 0.0 356.20517908267817 356.20517908267817 29.035984316004217 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 PAV 7.7428 - 37 + 1 3.497 80150.7 1.0 85 2267 2353 HBL1_DMSO_200M_050219_2,2354 HBL1_DMSO_200M_050219_2,2354, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2371 9.9828 800.0 220920.0 25 0 12934.0 -1 MPKAEKNAV 9 224 335.18032854352475 1002.5191562307745 3 335.1796752810478 MULTI CID FTMS 0 0 0 2370 67323.9453125 0.3876890686399816 -45 0.2593040466308594 1 Oxidation (M) _M(Oxidation (M))PKAEKNAV_ ENSG00000125877|ENST00000380113|ITPA;ENST00000472295.1_1_20:3202423-3204105:+|nuORF;ENST00000490838.6_1_20:3193963-3204105:+|nuORF;nc|ENSG00000125877|Q9BY32-2|ITPA;nc|ENSG00000125877|Q9BY32-3|ITPA 4.5288652416199255 0.7565837746943351 4 V 1 -1 13.099 0.0 0.0 1.3066 0.0 0.0 885.4397627754993 0.0 885.4397627754993 0.0 1.6789605096159654 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3066 + + 102 + 1 3.483 138933.5 0.4600000083446502 86 2283 2370 HBL1_DMSO_200M_050219_2,2371 HBL1_DMSO_200M_050219_2,2371,MPKAEKNAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2377 10.007 308.0 435060.0 25 0 38205.0 -1 0 114 340.198273763901 678.381994594602 2 340.1978942751884 MULTI CID FTMS 0 0 0 2376 239755.1875 0.9718260154931454 -7 0.0399417877197265 1 4 PKPR 4 -1 29.144 0.0 0.0 4.2962 0.0 0.0 182.0694871917952 0.0 182.0694871917952 0.0 16.045481652999953 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.2742275032520141 PKPR 4.2962 - 68 + 1 3.483 107921.6 1.0 87 2288 2376 HBL1_DMSO_200M_050219_2,2377 HBL1_DMSO_200M_050219_2,2377, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2384 10.031 8.4 6947200.0 25 0 1972500.0 + 4121 DAPAGRKV 8 55 407.2324846494959 812.4504163657917 2 407.2325622439384 MULTI CID FTMS 0 0 0 2383 6725212.5 0.2552215928937016 38 -0.1924924850463867 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 16.942295170755138 0.6606234159769251 4 DAPA 4 4 56.186 0.0 0.0 6.9156 0.0 0.0 0.0 455.2727488004857 455.2727488004857 51.5815315012393 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + DAPA 6.9156 + + 13 + 1 3.48 55193.0 1.0 88 2294 2383 HBL1_DMSO_200M_050219_2,2384 HBL1_DMSO_200M_050219_2,2384,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2385 10.034 120.0 573210.0 25 0 66217.0 16655 KELFSQHK 8 94 339.5235282600818 1015.5487553804452 3 339.5234557986259 MULTI CID FTMS 0 0 0 2383 310087.65625 0.2540719393881977 -40 0.2400655746459961 2 Unmodified _KELFSQHK_ ENSG00000166750|ENST00000299977|SLFN5 14.581692164780916 0.6954967302934248 4 [VG][HT]{I|L}P[HQ]K 9 6 [VG][HT]{I|L} + + 19.565 9.7879 1.9295 1.9265 1.9265 44.525 0.0 0.0 0.0 0.0 7.090606190045108 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.6549471895720985 [VG][HT]{I|L}P[HQ]K 1.9265 - 107 + 1 3.48 61171.3 1.0 89 2294 2383 HBL1_DMSO_200M_050219_2,2385 HBL1_DMSO_200M_050219_2,2385,KELFSQHK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2408 10.134 800.0 434260.0 25 0 74230.0 24050 LWNIPTYK 8 233 345.5272334649093 1033.559870994928 3 345.5266601443291 MULTI CID FTMS 0 0 0 2407 267675.0625 0.5051969404144246 -103 0.5661630630493164 1 Unmodified _LWNIPTYK_ ENSG00000174915|ENST00000308020|PTDSS2;ENST00000526878.5_1_11:460175-490579:+|nuORF 11.640296217721598 0.738950129755968 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 25.139 11.788 2.7463 2.4323 2.4323 45.016 0.0 0.0 0.0 0.0 13.356538848552956 0.0 0.0 0 0.25 0.0 0.3494850021680094 0.2742275032520141 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.4323 - 392 + 1 3.48 284663.3 0.6399999856948853 90 2316 2407 HBL1_DMSO_200M_050219_2,2408 HBL1_DMSO_200M_050219_2,2408,LWNIPTYK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2412 10.159 800.0 30872.0 25 0 8374.7 -1 0 25 1130.443920754465 3388.309932863595 3 1130.776293933392 MULTI CID FTMS 0 0 0 2411 26721.42578125 0.3297837086191815 1 -0.016402244567871 1 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20629 0.0 0.0 1473.5426731973823 1764.7173555963502 3238.2600287937325 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20629 - 1 + 1 3.48 30118.5 0.3199999928474426 91 2319 2411 HBL1_DMSO_200M_050219_2,2412 HBL1_DMSO_200M_050219_2,2412, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2422 10.207 800.0 38034.0 25 0 3264.7 -1 0 67 581.2594275151039 1740.7564531455114 3 581.5936767458916 MULTI CID FTMS 0 0 0 2421 75325.9453125 0.6889426225379074 -16 0.0886812210083007 1 4 QGG 3 -1 16.682 0.0 0.0 0.95834 0.0 0.0 893.4102750222679 602.2337130182249 1495.6439880404928 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 QGG 0.95834 - 97 + 1 3.48 36605.2 0.4000000059604645 92 2328 2421 HBL1_DMSO_200M_050219_2,2422 HBL1_DMSO_200M_050219_2,2422, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2441 10.282 252.0 246560.0 25 0 31800.0 + -1 IQRLETMK 8 78 517.7864127434412 1033.5582725536824 2 517.7870361208916 MULTI CID FTMS 0 0 0 2440 280946.1875 0.414388010240368 -77 0.3639163970947265 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 4 T{M(Oxidation (M))|F}K 3 -1 30.863 0.0 0.0 2.9861 0.0 0.0 639.3686801237981 0.0 639.3686801237981 0.0 0.3999695077106757 0.0 0.0 0 0.805462187404089 0.0 0.0 0.2887254899964357 T{M(Oxidation (M))|F}K 2.9861 + + 143 + 1 3.48 53953.8 1.0 93 2346 2440 HBL1_DMSO_200M_050219_2,2441 HBL1_DMSO_200M_050219_2,2441,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2443 10.287 70.0 827750.0 25 0 225760.0 + 4122 DAPAGRKV 8 54 407.2324846494959 812.4504163657917 2 407.2325012087822 MULTI CID FTMS 0 0 0 2442 794617.9375 0.0301557245589872 91 -0.4375991821289062 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 21.74664581756881 0.5868176546531598 4 DAPA 4 4 59.438 0.0 0.0 7.3159 0.0 0.0 0.0 455.2733553522094 455.2733553522094 55.94335023848103 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 + DAPA 7.3159 + + 19 + 1 3.48 60804.5 1.0 94 2347 2442 HBL1_DMSO_200M_050219_2,2443 HBL1_DMSO_200M_050219_2,2443,DAPAGRKV False True DAPAGRKV 10.287235 407.232501208782 505312896.0 2442.0 ENSG00000161016|ENST00000528957|RPL8;;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 4.107624650001526 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2445 10.292 43.0 1219800.0 25 0 240000.0 16656 KELFSQHK 8 86 339.5235282600818 1015.5487553804452 3 339.5232726931572 MULTI CID FTMS 0 0 0 2444 1123895.125 0.9208693358869904 14 -0.0570077896118164 1 Unmodified _KELFSQHK_ ENSG00000166750|ENST00000299977|SLFN5 14.581692164780916 0.6954967302934248 4 {I|L}PQHK 5 4 38.264 0.0 0.0 3.7678 0.0 0.0 394.1884781361078 0.0 394.1884781361078 0.0 26.274269105803327 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.6861818737241735 {I|L}PQHK 3.7678 - 97 + 1 3.48 48557.8 1.0 95 2348 2444 HBL1_DMSO_200M_050219_2,2445 HBL1_DMSO_200M_050219_2,2445,KELFSQHK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2467 10.38 260.0 285550.0 25 0 47734.0 8064 ENSVKIHLC 9 99 348.18465652601327 1041.5321401782398 3 348.1844360232353 MULTI CID FTMS 0 0 0 2466 116962.0859375 0.507138004882921 -24 0.1010313034057617 1 Unmodified _ENSVKIHLC_ ENSG00000089775|ENST00000608382|ZBTB25 7.910154910731844 0.6385446671287552 4 {[QS]|[NT]}DV 4 7 20.005 0.0 0.0 1.9207 0.0 0.0 0.0 609.3228299708145 609.3228299708145 5.595084613191183 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[QS]|[NT]}DV 1.9207 - 65 + 1 3.48 65964.7 1.0 96 2369 2466 HBL1_DMSO_200M_050219_2,2467 HBL1_DMSO_200M_050219_2,2467,ENSVKIHLC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2468 10.383 172.0 508030.0 25 0 96348.0 -1 TATRPITKM 9 101 345.5272334649093 1033.559870994928 3 345.5268737673759 MULTI CID FTMS 0 0 0 2466 231851.328125 0.4375849603089972 -50 0.229863166809082 2 Oxidation (M) _TATRPITKM(Oxidation (M))_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 11.517880264261096 0.5249077435482886 4 {I|L}P[HQ]K 5 -1 27.193 0.0 0.0 2.631 0.0 0.0 412.2015468755904 0.0 412.2015468755904 0.0 7.310698215154701 0.0 0.0 0 0.0 0.0 0.0 1.0994850021680094 {I|L}P[HQ]K 2.631 - 149 + 1 3.48 78991.3 1.0 97 2369 2466 HBL1_DMSO_200M_050219_2,2468 HBL1_DMSO_200M_050219_2,2468,TATRPITKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2506 10.531 113.0 530150.0 25 0 66825.0 + -1 IQRLETMK 8 80 517.7864127434412 1033.5582725536824 2 517.7869750857353 MULTI CID FTMS 0 0 0 2505 524348.5 0.773399822652947 -17 0.0675792694091796 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 4 TT[YK]THR 7 -1 37.994 0.0 0.0 3.6761 0.0 0.0 128.0951863019547 0.0 128.0951863019547 0.0 3.697435287020383 0.0 0.0 0 0.5 0.0 0.6421590589602533 0.3252574989159953 TT[YK]THR 3.6761 - 91 1 3.48 51293.4 1.0 98 2406 2505 HBL1_DMSO_200M_050219_2,2506 HBL1_DMSO_200M_050219_2,2506,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2507 10.545 800.0 173240.0 25 0 21632.0 + 43118 VYPDKTRPR 9 132 377.8804566081285 1130.6195404245857 3 377.8802978396416 MULTI CID FTMS 0 0 0 2505 75112.6953125 0.3202548615030567 -16 0.0637235641479492 2 Unmodified _VYPDKTRPR_ ENSG00000128708|ENST00000264108|HAT1;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1 40.72490554402381 0.0714771638475563 4 VYPDK 5 4 76.113 0.0 0.0 6.732 0.0 0.0 0.0 525.2887667291624 525.2887667291624 62.13403486494023 0.0 0.0 0.0 0 0.7357737871658818 2.0 0.0 1.2302046884880935 + VYPDK 6.732 + + 146 + 1 3.48 117738.7 0.5699999928474426 99 2406 2505 HBL1_DMSO_200M_050219_2,2507 HBL1_DMSO_200M_050219_2,2507,VYPDKTRPR True True VYPDKTRPR 10.54526 377.880297839642 1353390.0 2505.0 ENST00000457761.6_1_2:172821936-172844354:+|nuORF;;nc|ENSG00000128708|O14929-2|HAT1;;ENSG00000128708|ENST00000264108|HAT1 6.009799321492513 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2508 10.559 800.0 177760.0 25 0 14939.0 + 39458 VAPRAKSV 8 133 414.2583738351587 826.5021947371174 2 414.2584411501884 MULTI CID FTMS 0 0 0 2505 90562.65625 0.5666996295730655 -3 0.0119028091430664 3 Unmodified _VAPRAKSV_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 32.30548876998284 0.3644845974844379 4 VAV 3 5 52.435 0.0 0.0 6.3442 0.0 0.0 0.0 554.3017061822874 554.3017061822874 36.197887582883936 0.0 0.0 0.0 0 0.6237125054200234 2.0 0.0 0.0 VAV 6.3442 - 58 + 1 3.48 114268.1 0.4399999976158142 100 2406 2505 HBL1_DMSO_200M_050219_2,2508 HBL1_DMSO_200M_050219_2,2508,VAPRAKSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2510 10.564 30.0 1953800.0 25 0 595020.0 7448 EGPAGVRK 8 62 407.23262818900105 812.4507034448021 2 407.2324401736259 MULTI CID FTMS 0 0 0 2509 1979213.25 0.6354687228719771 28 -0.1488409042358398 1 Unmodified _EGPAGVRK_ ENST00000523135.1_1_5:179680521-179691830:-|nuORF 16.942295170755138 0.6606234159769251 4 {[DA]|[EG]}PA 4 4 43.94 0.0 0.0 5.4083 0.0 0.0 0.0 455.2732630217613 455.2732630217613 39.3360688456422 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + {[DA]|[EG]}PA 5.4083 + + 12 + 1 3.48 50790.6 1.0 101 2407 2509 HBL1_DMSO_200M_050219_2,2510 HBL1_DMSO_200M_050219_2,2510,EGPAGVRK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2511 10.565 33.0 1520900.0 25 0 323360.0 + -1 ELKHSKMK 8 74 339.5235476079976 1015.5488134241928 3 339.5233642458916 MULTI CID FTMS 0 0 0 2509 1360137.875 0.8582079705084011 -15 0.0882349014282226 2 Oxidation (M) _ELKHSKM(Oxidation (M))K_ REV__ENSG00000068745|ENST00000328631|IP6K2 5.731851221503515 0.7895402735786415 4 [PS]{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}T{M(Oxidation (M))|F}K 9 -1 [PS]{[QV]|[N{I|L}]|[RA]|[KV]}P + + 16.916 1.3727 0.27007 1.6657 1.6657 44.399 0.0 0.0 0.0 0.0 10.396154426879908 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.2059771852360797 [PS]{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}T{M(Oxidation (M))|F}K 1.6657 - 62 + 1 3.48 48967.2 1.0 102 2407 2509 HBL1_DMSO_200M_050219_2,2511 HBL1_DMSO_200M_050219_2,2511,ELKHSKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2512 10.579 800.0 195870.0 25 0 9482.0 37144 THPDQAEK 8 136 463.2221842815124 924.4298156298248 2 463.2224609255791 MULTI CID FTMS 0 0 0 2509 142021.46875 0.4191133459214327 -42 0.2028989791870117 3 Unmodified _THPDQAEK_ ENST00000546949.5_1_19:58514261-58515786:+|nuORF 41.8396318013385 0.2035142800366642 4 HVDAAEK 7 3 61.604 0.0 0.0 6.664 0.0 0.0 156.0542624637597 0.0 156.0542624637597 0.0 45.828824892322686 0.0 0.0 0 2.4049471895720984 0.0 0.3494850021680094 0.3494850021680094 HVDAAEK 6.664 - 323 + 1 3.48 119809.9 0.5299999713897705 103 2407 2509 HBL1_DMSO_200M_050219_2,2512 HBL1_DMSO_200M_050219_2,2512,THPDQAEK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2526 10.632 103.0 796880.0 25 0 177320.0 + -1 IQRLETMK 8 84 345.5272334649093 1033.559870994928 3 345.5267822146416 MULTI CID FTMS 0 0 0 2525 413474.28125 0.7803713199004233 1 -0.0047864913940429 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 8.745405648335112 0.7712480472641603 4 {I|L}P[HQ]K 5 -1 23.188 0.0 0.0 2.2435 0.0 0.0 412.2013637701217 0.0 412.2013637701217 0.0 6.684983363500976 0.0 0.0 0 0.0 0.0 0.0 0.6989700043360187 {I|L}P[HQ]K 2.2435 - 139 + 1 3.48 75925.6 1.0 104 2420 2525 HBL1_DMSO_200M_050219_2,2526 HBL1_DMSO_200M_050219_2,2526,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2530 10.651 516.0 155210.0 25 0 16016.0 + 42954 VVSPKSQS 8 99 416.2321595200887 830.4497661069774 2 416.2319213747978 MULTI CID FTMS 0 0 0 2529 95238.484375 0.0072143376694788 -60 0.2915687561035156 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 14.838274106304384 0.6917062315640577 4 VVSE 4 5 41.387 0.0 0.0 4.9837 0.0 0.0 0.0 413.2155855768188 413.2155855768188 29.60445275016017 0.0 0.0 0.0 0 0.6694451763165201 2.0 0.0 0.0 VVSE 4.9837 - 95 + 1 3.48 67840.9 1.0 105 2423 2529 HBL1_DMSO_200M_050219_2,2530 HBL1_DMSO_200M_050219_2,2530,VVSPKSQS False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2533 10.672 800.0 140200.0 25 0 6931.3 27263 PHDTAISG 8 158 399.1931247771653 796.3716966211306 2 399.1928588747978 MULTI CID FTMS 0 0 0 2532 86698.0 0.3489552389553917 -47 0.2406463623046875 1 Unmodified _PHDTAISG_ ENSG00000111783|ENST00000392842|RFX4;nc|ENSG00000111783|Q33E94-2|RFX4;nc|ENSG00000111783|Q33E94-3|RFX4 12.531546534597751 0.7257836412119636 4 DAAEK 5 6 40.776 0.0 0.0 5.1202 0.0 0.0 264.1229306072618 0.0 264.1229306072618 0.0 31.62708774215752 0.0 0.0 0 1.7302046884880935 0.0 0.8494850021680094 0.3252574989159953 DAAEK 5.1202 - 149 + 1 3.48 91530.2 0.4199999868869781 106 2425 2532 HBL1_DMSO_200M_050219_2,2533 HBL1_DMSO_200M_050219_2,2533,PHDTAISG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2559 10.775 202.0 425510.0 25 0 52603.0 + 36032 SVQHVDAAEK 10 99 361.8526730384067 1082.53618971542 3 361.8523437380791 MULTI CID FTMS 0 0 0 2558 299649.3125 0.0055988881290817 -22 0.0882444381713867 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 24.881564428377168 0.4096545554397951 4 HVDAAEK 7 3 28.19 0.0 0.0 2.6041 0.0 0.0 314.160446387274 0.0 314.160446387274 0.0 6.975413569724207 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.3054621874040891 + HVDAAEK 2.6041 + + 349 + 1 3.48 74947.9 1.0 107 2450 2558 HBL1_DMSO_200M_050219_2,2559 HBL1_DMSO_200M_050219_2,2559,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2560 10.788 800.0 145310.0 25 0 10296.0 + 36036 SVQHVDAAEK 10 117 542.2751280319404 1082.5357031306808 2 542.2750732302666 MULTI CID FTMS 0 0 0 2558 116445.3671875 0.0049389906340584 -23 0.0922698974609375 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 90.10356042845372 0.0093261538006644 4 [VS]QHVDAAEK 10 0 + 114.28 0.0 0.0 10.557 10.557 93.421 0.0 0.0 0.0 60.950528104279016 17.39909385331508 17.39909385331508 9.164539485499262 0 3.278659694992122 2.0 1.066901560044258 0.8252574989159953 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]QHVD[DV]GK;[VS]AGHVDAAEK;[VS][AG]HVD[DV]GK;[VS]QHVDAAA[VS];[VS]AGVHDAAEK;[VS]AGHVDAAA[VS];[VS]QVHDAAEK;[VS]AGHVD[DV]GK 10.557;9.7102;8.6114;8.4207;7.7648;7.5965;7.4758;7.4148;7.3603;7.3265 +;-;-;-;-;-;-;-;-;- + 4002 + 1 3.48 89607.3 0.4399999976158142 108 2450 2558 HBL1_DMSO_200M_050219_2,2560 HBL1_DMSO_200M_050219_2,2560,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2561 10.802 800.0 25102.0 25 0 2086.9 -1 RCWWRWPRCYW 11 44 604.610178177509 1810.808705132727 3 604.6095458865166 MULTI CID FTMS 0 0 0 2558 80044.265625 0.996261224591399 -6 0.0242576599121093 3 2 Carbamidomethyl (C) _RC(Carbamidomethyl (C))WWRWPRC(Carbamidomethyl (C))YW_ ENST00000341500.9_1_19:7267817-7293934:-|nuORF 0.0 0.8751479354844584 4 G 1 -1 6.9897 0.0 0.0 0.386 0.0 0.0 1091.5218768682628 659.2422579400999 1750.7641348083623 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.386 - 8 + 1 3.48 26437.7 0.4000000059604645 109 2450 2558 HBL1_DMSO_200M_050219_2,2561 HBL1_DMSO_200M_050219_2,2561,RCWWRWPRCYW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2563 10.809 231.0 271370.0 25 0 33349.0 + -1 IQRLETMK 8 86 517.7864127434412 1033.5582725536824 2 517.7868530154228 MULTI CID FTMS 0 0 0 2562 265701.84375 0.3919030164762768 28 -0.3453216552734375 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 4 [KT]T[YK]TTK 8 -1 39.799 0.0 0.0 3.8507 0.0 0.0 0.0 78.985650943308 78.985650943308 9.872366890523327 0.0 0.0 0.0 0 0.0 0.0 1.5669015600442575 0.3494850021680094 [KT]T[YK]TTK 3.8507 - 180 1 3.48 53213.5 1.0 110 2451 2562 HBL1_DMSO_200M_050219_2,2563 HBL1_DMSO_200M_050219_2,2563,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2566 10.818 79.0 715670.0 25 0 143500.0 + -1 ELKHSKMK 8 82 339.5235476079976 1015.5488134241928 3 339.5233947634697 MULTI CID FTMS 0 0 0 2565 706833.0 0.4459913407075475 31 -0.3540058135986328 1 Oxidation (M) _ELKHSKM(Oxidation (M))K_ REV__ENSG00000068745|ENST00000328631|IP6K2 12.240655878213236 0.7300809844188293 4 {I|L}PQHK 5 -1 43.123 0.0 0.0 4.2462 0.0 0.0 394.18792582829263 0.0 394.18792582829263 0.0 36.18440000316717 0.0 0.0 0 1.1989700043360187 0.0 0.0 1.024227503252014 {I|L}PQHK 4.2462 - 99 + 1 3.48 53530.9 1.0 111 2453 2565 HBL1_DMSO_200M_050219_2,2566 HBL1_DMSO_200M_050219_2,2566,ELKHSKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2567 10.821 147.0 451140.0 25 0 112480.0 7449 EGPAGVRK 8 73 407.23262818900105 812.4507034448021 2 407.2324706912041 MULTI CID FTMS 0 0 0 2565 379770.375 0.1219333971141623 74 -0.6410999298095703 2 Unmodified _EGPAGVRK_ ENST00000523135.1_1_5:179680521-179691830:-|nuORF 16.942295170755138 0.6606234159769251 4 {[DA]|[EG]}PA 4 4 42.747 0.0 0.0 5.2615 0.0 0.0 0.0 455.27341638736567 455.27341638736567 38.143265708843046 0.0 0.0 0.0 0 0.6549471895720985 2.0 0.0 0.0 + {[DA]|[EG]}PA 5.2615 + + 25 + 1 3.48 55746.4 1.0 112 2453 2565 HBL1_DMSO_200M_050219_2,2567 HBL1_DMSO_200M_050219_2,2567,EGPAGVRK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2569 10.83 336.0 296260.0 25 0 11792.0 37145 THPDQAEK 8 114 463.2221842815124 924.4298156298248 2 463.2222778201103 MULTI CID FTMS 0 0 0 2568 313566.46875 0.9253522938698724 5 -0.0246734619140625 1 Unmodified _THPDQAEK_ ENST00000546949.5_1_19:58514261-58515786:+|nuORF 41.8396318013385 0.2035142800366642 4 HVDAAEK 7 3 64.396 0.0 0.0 6.966 0.0 0.0 156.0544558429379 0.0 156.0544558429379 0.0 48.63786487868384 0.0 0.0 0 2.4802046884880937 0.0 0.6694451763165201 0.3494850021680094 HVDAAEK 6.966 - 288 + 1 3.48 80064.9 1.0 113 2454 2568 HBL1_DMSO_200M_050219_2,2569 HBL1_DMSO_200M_050219_2,2569,THPDQAEK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2577 10.867 652.0 106780.0 25 0 16284.0 35631 SVAMAEDRGNG 11 103 553.7468902146821 0 553.7464477419853 PEAK CID FTMS 0 0 0 2576 72200.6640625 0.5929450606320142 -16 0.1055679321289062 1 Unmodified _SVAMAEDRGNG_ ENSG00000168014|ENST00000334126|C2CD3;nc|ENSG00000168014|Q4AC94-1|C2CD3;nc|ENSG00000168014|Q4AC94-2|C2CD3;nc|ENSG00000168014|Q4AC94-3|C2CD3;nc|ENSG00000168014|Q4AC94-4|C2CD3 12.872603262515298 0.4237345857616066 4 QAE{M(Oxidation (M))|F}QS 6 9 26.86 0.0 0.0 2.4297 0.0 0.0 260.1119484928504 152.04688440494377 412.1588328977941 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 QAE{M(Oxidation (M))|F}QS 2.4297 - 182 + 1 3.493 58113.7 1.0 114 2461 2576 HBL1_DMSO_200M_050219_2,2577 HBL1_DMSO_200M_050219_2,2577,SVAMAEDRGNG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2580 10.888 800.0 70399.0 25 0 15527.0 -1 0 71 525.1128635987005 0 525.1132690310478 PEAK CID FTMS 0 0 0 2579 57604.0859375 0.4814601243370337 6 -0.0762586593627929 1 4 Q 1 -1 0.71334 0.0 0.0 0.068053 0.0 0.0 686.0871335921291 231.0411776178344 917.1283112099636 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.068053 - 1 + 1 3.493 51063.9 0.5199999809265137 115 2463 2579 HBL1_DMSO_200M_050219_2,2580 HBL1_DMSO_200M_050219_2,2580, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2583 10.896 28.0 1570400.0 25 0 313360.0 + 42955 VVSPKSQS 8 56 416.2321595200887 830.4497661069774 2 416.2321349978447 MULTI CID FTMS 0 0 0 2582 2172848.25 0.1645937677705319 -18 0.1353816986083984 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 20.453626601364224 0.6087503291685402 4 VVSPAS 6 3 60.406 0.0 0.0 7.2739 0.0 0.0 0.0 287.1362703912719 287.1362703912719 33.94734048120206 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.4247425010840047 0.0 VVSPAS 7.2739 - 70 + 1 3.493 40504.1 1.0 116 2465 2582 HBL1_DMSO_200M_050219_2,2583 HBL1_DMSO_200M_050219_2,2583,VVSPKSQS False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2584 10.91 800.0 267360.0 25 0 16334.0 + 24689 MAHMASKE 8 275 302.1388670687271 903.3947718063814 3 302.1382629275322 MULTI CID FTMS 0 0 0 2582 104209.28125 0.4038737861490799 -7 0.0498971939086914 2 Unmodified _MMGWPSVP_ ENST00000432206.1_1_20:13373901-13374318:+|nuORF;ENST00000447427.2_1_1:120101380-120101404:-|nuORF;nc|ENSG00000111640|P04406-2|GAPDH;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;ENSG00000111640|ENST00000229239|GAPDH;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 6.723162845929126 0.7835230281555235 4 MAHMA[KS]E 8 6 + 46.577 0.0 0.0 5.1558 5.1558 84.309 0.0 0.0 0.0 33.150385095070725 3.219716489722422 3.219716489722422 12.552725051033056 0 0.0 0.0705810742857072 0.5138793319624578 0.0 MAHMA[KS]E;MAHM[KG]TE;MAHM[KT]GE;MAHMA{[CA]|SS}AV;MAHM[C(Carbamidomethyl (C))R]V;MAH[PG][QT]Y;MAH[PG][TA]GY 5.1558;3.7663;3.0738;2.9298;2.8115;1.3789;0.25544 -;-;-;-;-;-;- 156 + 1 3.493 175350.2 0.5 117 2465 2582 HBL1_DMSO_200M_050219_2,2584 HBL1_DMSO_200M_050219_2,2584,MMGWPSVP False False MAHMASKE 10.910444 302.138262927532 1901549.0625 2582.0 ENST00000432206.1_1_20:13373901-13374318:+|nuORF;;ENST00000447427.2_1_1:120101380-120101404:-|nuORF;;nc|ENSG00000111640|P04406-2|GAPDH;;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;;ENSG00000111640|ENST00000229239|GAPDH;;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 6.362354596455892 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2587 10.93 800.0 188030.0 25 0 12570.0 27264 PHDTAISG 8 159 399.1931247771653 796.3716966211306 2 399.1932861208916 MULTI CID FTMS 0 0 0 2586 173280.421875 0.6974452815714517 -5 0.046579360961914 1 Unmodified _PHDTAISG_ ENSG00000111783|ENST00000392842|RFX4;nc|ENSG00000111783|Q33E94-2|RFX4;nc|ENSG00000111783|Q33E94-3|RFX4 24.67388899826682 0.525179942228231 4 VDAAEK 6 6 54.404 0.0 0.0 6.8315 0.0 0.0 165.05316742366807 0.0 165.05316742366807 0.0 36.19956514658149 0.0 0.0 0 2.305462187404089 0.0 0.7742275032520141 0.3252574989159953 VDAAEK 6.8315 - 246 + 1 3.493 123020.6 0.7900000214576721 118 2467 2586 HBL1_DMSO_200M_050219_2,2587 HBL1_DMSO_200M_050219_2,2587,PHDTAISG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2588 10.944 800.0 127940.0 25 0 5071.2 + -1 MGYFCMAEK 9 133 568.7309620136097 1135.4473710940192 2 568.7316772341728 MULTI CID FTMS 0 0 0 2586 94723.015625 0.2063610744970779 -6 0.0604248046875 2 Carbamidomethyl (C) _MGYFC(Carbamidomethyl (C))MAEK_ REV__ENST00000607690.1_1_2:190531048-190531108:+|nuORF 20.453626601364224 0.2830276176381075 4 VDAAEK 6 -1 43.923 0.0 0.0 3.8684 0.0 0.0 504.1286831455971 0.0 504.1286831455971 0.0 31.509461452434245 0.0 0.0 0 0.75 0.0 1.110924374808178 0.3252574989159953 VDAAEK 3.8684 - 252 + 1 3.493 79778.3 0.6000000238418579 119 2467 2586 HBL1_DMSO_200M_050219_2,2588 HBL1_DMSO_200M_050219_2,2588,MGYFCMAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2591 10.964 800.0 503730.0 25 0 40561.0 + + 29268 QHVDAAEK 8 173 449.2247782654947 896.4350035977894 2 449.2248107790947 MULTI CID FTMS 0 0 0 2590 175317.828125 0.4504614640724943 -5 0.0600700378417968 1 Unmodified _QHPSTASAV_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 81.89019881105858 0.0170587746866453 4 QHVDAAEK 8 -1 + 98.693 0.0 0.0 11.009 11.009 90.651 0.0 0.0 0.0 70.95790308423004 22.716977436784163 22.716977436784163 6.281446971601312 0 1.760574239612792 0.5528419686577808 1.4406140654642814 0.6307196863200843 QHVDAAEK;QHVADAEK;[HQ]VDAAEK;[HV]QDAAEK;[HQ][PS]TAEK;[AG]HVDAAEK;[HQ]VEEQK;[DV]A[HQ]AEK;[AG]H[PS]TAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RH]AEK 11.009;10.309;6.612;5.5242;4.894;4.7629;3.6481;3.6057;3.6026;3.465 -;-;-;-;-;-;-;-;-;- 1661 + 1 3.475 310198.0 0.7300000190734863 120 2469 2590 HBL1_DMSO_200M_050219_2,2591 HBL1_DMSO_200M_050219_2,2591,QHPSTASAV False False QHVDAAEK 10.963999 449.2253 3556319.5 2590.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 5.94851557413737 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2592 10.978 800.0 192130.0 25 0 16095.0 + 35966 SVQATSTFRSA 11 148 385.5319389793706 1153.5739875383117 3 385.5316955447197 MULTI CID FTMS 0 0 0 2590 100694.0625 0.4766534892844273 -3 0.0375146865844726 2 Unmodified _SVQATSTFRSA_ REV__ENSG00000196159|ENST00000394329|FAT4;REV__nc|ENSG00000196159|Q6V0I7-2|FAT4;REV__nc|ENSG00000196159|Q6V0I7-3|FAT4;REV__nc|ENSG00000196159|Q6V0I7|FAT4 8.97624648632007 0.8327974195962515 4 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}AE{M(Oxidation (M))|F}[KG] 11 -1 + 49.001 0.0 0.0 4.2478 4.2478 76.565 0.0 0.0 0.0 18.03660125269676 6.064247967304119 6.064247967304119 7.95880017344075 0 0.5 2.0 0.1989700043360188 0.2302046884880938 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}AE{M(Oxidation (M))|F}[KG];[VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T][KG];[VS]AG{M(Oxidation (M))|F}AAAE{M(Oxidation (M))|F}[KG];[VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}Y[KG];[VS]A[AG]{[MS]|[{M(Oxidation (M))|F}A]}AE{M(Oxidation (M))|F}[KG];[VS]AG{M(Oxidation (M))|F}AAV[{M(Oxidation (M))|F}T][KG];[VS]AG{M(Oxidation (M))|F}AAA{I|L}Y[KG];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{[MS]|[{M(Oxidation (M))|F}A]}AE{M(Oxidation (M))|F}[KG];[WQ]HV{[MS]|[{M(Oxidation (M))|F}A]}QAAP;{[SA]|[TG]}VQ{[MS]|[{M(Oxidation (M))|F}A]}AE{M(Oxidation (M))|F}[KG] 4.2478;3.5578;3.4852;3.4694;3.2569;2.7953;2.7068;2.6842;2.5058;2.4454 -;-;-;-;-;-;-;-;-;- 793 1 3.475 126016.3 0.6499999761581421 121 2469 2590 HBL1_DMSO_200M_050219_2,2592 HBL1_DMSO_200M_050219_2,2592,SVQATSTFRSA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2594 10.996 800.0 224160.0 25 0 28365.0 + -1 WHSCMKEK 8 108 561.2487598334221 1120.4829667336442 2 561.2490722537041 MULTI CID FTMS 0 0 0 2593 146466.84375 0.6904401447483072 -2 0.0334749221801757 1 Carbamidomethyl (C),Oxidation (M) _WHSC(Carbamidomethyl (C))M(Oxidation (M))KEK_ REV__nc|ENSG00000127328|Q96QF0-5|RAB3IP;REV__nc|ENSG00000127328|Q96QF0-6|RAB3IP 29.081581746732265 0.4323690340403521 4 AAEK 4 -1 46.701 0.0 0.0 4.1679 0.0 0.0 703.2595746173057 0.0 703.2595746173057 0.0 -0.5845516199980949 -0.5845516199980949 0.0 0 1.7302046884880935 0.0 0.5 0.3252574989159953 AAEK 4.1679 - 296 + 1 3.475 138635.2 0.550000011920929 122 2470 2593 HBL1_DMSO_200M_050219_2,2594 HBL1_DMSO_200M_050219_2,2594,WHSCMKEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2595 11.01 800.0 81196.0 25 0 5291.6 29684 QPDITNSM 8 120 453.2058898806572 0 453.2058898806572 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _QPDITNSM_ ENSG00000145386|ENST00000274026|CCNA2 14.838274106304384 0.487171416001894 4 2 7 8.5835 0.0 0.0 0.94908 0.0 0.0 451.21877331424565 265.0774019830688 716.2961752973144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0.94908 - 88 + 1 3.475 56613.9 0.4000000059604645 123 2470 2593 HBL1_DMSO_200M_050219_2,2595 HBL1_DMSO_200M_050219_2,2595,QPDITNSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2597 11.028 800.0 125950.0 25 0 5639.0 -1 ICCCFQEK 8 108 572.7314711372851 1143.44838934137 2 572.7314330935478 MULTI CID FTMS 0 0 0 2596 108940.171875 0.7638316193556233 -2 0.061863899230957 1 3 Carbamidomethyl (C) _IC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))FQEK_ ENST00000532470.2_1_11:36657661-36669604:+|nuORF 8.593279151180031 0.7721714526254883 4 AAEK 4 -1 29.034 0.0 0.0 2.5391 0.0 0.0 726.2254717161733 0.0 726.2254717161733 0.0 12.835755116765297 0.0 0.0 0 0.0 0.0 0.5 0.2887254899964357 AAEK 2.5391 - 106 + 1 3.427 79910.4 0.4399999976158142 124 2471 2596 HBL1_DMSO_200M_050219_2,2597 HBL1_DMSO_200M_050219_2,2597,ICCCFQEK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2598 11.042 800.0 49914.0 25 0 5693.8 + -1 EEMCYEDDK 9 78 617.7161160735435 0 617.7164794802666 PEAK CID FTMS 0 0 0 2596 77355.109375 1.0 0 0.0 2 Carbamidomethyl (C),Oxidation (M) _EEM(Oxidation (M))C(Carbamidomethyl (C))YEDDK_ REV__ENSG00000109927|ENST00000392793|TECTA 2.059750862983233 0.3444685223463734 4 GH 2 -1 5.5732 0.0 0.0 0.45185 0.0 0.0 88.9765277378818 947.3324679010374 1036.3089956389192 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GH 0.45185 - 19 + 1 3.427 36285.9 0.3899999856948852 125 2471 2596 HBL1_DMSO_200M_050219_2,2598 HBL1_DMSO_200M_050219_2,2598,EEMCYEDDK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2600 11.046 1.3 49760000.0 25 0 8647800.0 + 36033 SVQHVDAAEK 10 74 361.8526730384067 1082.53618971542 3 361.8527709841728 MULTI CID FTMS 0 0 0 2599 53519432.0 1.0 0 0.0 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 4 [VS]AGHVDAAEK 11 2 [VS]AG + + 44.985 26.559 8.4541 4.1555 4.1555 49.235 0.0 0.0 0.0 0.0 14.07004216132698 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3054621874040891 [VS]AGHVDAAEK 4.1555 - 320 + 1 3.427 56802.0 1.0 126 2472 2599 HBL1_DMSO_200M_050219_2,2600 HBL1_DMSO_200M_050219_2,2600,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2601 11.048 3.0 17847000.0 25 0 1506600.0 + 36037 SVQHVDAAEK 10 78 542.2751280319404 1082.5357031306808 2 542.2755004763603 MULTI CID FTMS 0 0 0 2599 22980124.0 0.9746941415260132 -1 0.0321712493896484 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 74.09353968926766 0.0188047629662086 4 [VS]QHVDAAEK 10 0 + 119.76 0.0 0.0 11.063 11.063 93.263 0.0 0.0 0.0 93.73503163448704 17.39909385331508 17.39909385331508 9.164539485499247 0 3.234636880228201 2.0 0.8807196863200843 0.8252574989159953 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAEK;[VS]QHVD[DV]GK;[VS][AG]HVD[DV]GK;[VS]AGHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]QHVDAAA[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK 11.063;10.216;8.9297;8.8979;8.0513;7.5721;7.5005;6.9613;6.5231;6.5135 +;-;-;-;-;-;-;-;-;- + 1209 + 1 3.427 47890.1 1.0 127 2472 2599 HBL1_DMSO_200M_050219_2,2601 HBL1_DMSO_200M_050219_2,2601,SVQHVDAAEK True True SVQHVDAAEK 11.047643 542.27550047636 1630674816.0 2599.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 11.906336784362791 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2602 11.059 676.0 120030.0 25 0 24228.0 -1 CYKCEDCGK 9 79 610.2327758669853 0 610.2327758669853 PEAK CID FTMS 0 0 0 -1 0 3 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))YKC(Carbamidomethyl (C))EDC(Carbamidomethyl (C))GK_ ENSG00000159840|ENST00000322764|ZYX;nc|ENSG00000159840|Q15942-2|ZYX 3.944395688203298 0.3444685223463734 4 K{M(Oxidation (M))|F} 2 -1 10.969 0.0 0.0 0.90025 0.0 0.0 97.96550319886668 842.3156221979124 940.2811253967792 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K{M(Oxidation (M))|F} 0.90025 - 9 + 1 3.427 67826.9 1.0 128 2472 2599 HBL1_DMSO_200M_050219_2,2602 HBL1_DMSO_200M_050219_2,2602,CYKCEDCGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2603 11.072 709.0 60272.0 25 0 8752.8 + -1 CMSPMAMKEK 10 67 602.2499247289213 0 602.2496826052666 PEAK CID FTMS 0 0 0 2599 88721.90625 0.8879500257360298 -1 0.0321712493896484 4 3 Oxidation (M) _CM(Oxidation (M))SPM(Oxidation (M))AM(Oxidation (M))KEK_ REV__ENST00000389805.8_1_5:179264885-179265023:+|nuORF 8.745405648335112 0.3843311602926832 4 WQ[HC]VHGE 8 -1 10.355 0.0 0.0 0.8611 0.0 0.0 97.96617485964096 125.07259546451408 223.03877032415505 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 WQ[HC]VHGE 0.8611 - 134 + 1 3.427 38341.8 1.0 129 2472 2599 HBL1_DMSO_200M_050219_2,2603 HBL1_DMSO_200M_050219_2,2603,CMSPMAMKEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2605 11.076 107.0 559890.0 25 0 149800.0 + 4123 DAPAGRKV 8 67 407.2324972178873 812.4504415025747 2 407.2323181033134 MULTI CID FTMS 0 0 0 2604 670105.75 0.815028703563143 5 -0.0580072402954101 1 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 16.942295170755138 0.6606234159769251 4 DAPA 4 4 56.186 0.0 0.0 6.9156 0.0 0.0 0.0 455.27341638736567 455.27341638736567 52.69077524932108 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + DAPA 6.9156 + + 16 + 1 3.427 54802.5 1.0 130 2473 2604 HBL1_DMSO_200M_050219_2,2605 HBL1_DMSO_200M_050219_2,2605,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2606 11.081 281.0 323650.0 25 0 40434.0 + -1 ELKHSKMK 8 136 339.5235476079976 1015.5488134241928 3 339.5231811404228 MULTI CID FTMS 0 0 0 2604 173409.25 0.1094162608403827 51 -0.370370864868164 2 Oxidation (M) _ELKHSKM(Oxidation (M))K_ REV__ENSG00000068745|ENST00000328631|IP6K2 8.745405648335112 0.7712480472641603 4 P[HQ]K 4 -1 18.835 0.0 0.0 1.8547 0.0 0.0 507.2712837643036 0.0 507.2712837643036 0.0 7.866002667201343 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.6171302707394362 P[HQ]K 1.8547 - 120 + 1 3.427 77645.5 1.0 131 2473 2604 HBL1_DMSO_200M_050219_2,2606 HBL1_DMSO_200M_050219_2,2606,ELKHSKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2608 11.099 800.0 131980.0 25 0 6087.9 -1 DQVTDMMIAN 10 142 577.2469438847074 1152.4793348362148 2 577.2477294802666 MULTI CID FTMS 0 0 0 2607 93971.5390625 0.197776553065485 -23 0.2782478332519531 1 Oxidation (M) _DQVTDM(Oxidation (M))MIAN_ ENSG00000124171|ENST00000371610|PARD6B;ENSG00000178184|ENST00000353265|PARD6G 12.240655878213236 0.6421556946785427 4 [VS][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]EAQQ 8 -1 40.411 0.0 0.0 3.5065 0.0 0.0 0.0 200.06372139310847 200.06372139310847 26.133793462474067 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3494850021680094 0.0 [VS][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]EAQQ 3.5065 - 603 1 3.427 83534.0 0.4799999892711639 132 2474 2607 HBL1_DMSO_200M_050219_2,2608 HBL1_DMSO_200M_050219_2,2608,DQVTDMMIAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2609 11.113 800.0 43279.0 25 0 2752.5 + 3480 CHDFDPDTEK 10 69 603.7405119747408 0 603.7412597537041 PEAK CID FTMS 0 0 0 2607 77097.734375 1.0 0 0.0 2 Unmodified _CHDFDPDTEK_ REV__ENSG00000113269|ENST00000521389|RNF130;REV__nc|ENSG00000113269|Q86XS8-2|RNF130 9.38312468134398 0.3794934366477728 4 E 1 -1 6.5938 0.0 0.0 0.54699 0.0 0.0 930.3174669653034 143.0831698053344 1073.400636770638 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E 0.54699 + + 18 + 1 3.427 31029.3 0.4300000071525574 133 2474 2607 HBL1_DMSO_200M_050219_2,2609 HBL1_DMSO_200M_050219_2,2609,CHDFDPDTEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2611 11.122 309.0 267200.0 25 0 30650.0 + -1 VCRACANEK 9 114 554.2547438342802 0 554.2545043826103 PEAK CID FTMS 0 0 0 2610 258556.015625 0.7295412724474696 -2 0.0415973663330078 1 2 Carbamidomethyl (C) _VC(Carbamidomethyl (C))RAC(Carbamidomethyl (C))ANEK_ REV__ENSG00000070214|ENST00000374720|SLC44A1;REV__nc|ENSG00000070214|Q8WWI5-2|SLC44A1;REV__nc|ENSG00000070214|Q8WWI5-3|SLC44A1 22.736283301280096 0.1762661025464585 4 EAA 3 -1 35.679 0.0 0.0 3.2245 0.0 0.0 146.10597426582189 686.2485412629572 832.3545155287791 0.0 0.0 0.0 0.0 0 2.0 0.0 0.7887254899964358 0.0 EAA 3.2245 - 1236 1 3.382 64118.7 1.0 134 2475 2610 HBL1_DMSO_200M_050219_2,2611 HBL1_DMSO_200M_050219_2,2611,VCRACANEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2615 11.148 800.0 97054.0 25 0 5300.9 + 12014 GPSRASSV 8 135 380.701070960496 759.3875889877919 2 380.7012512087822 MULTI CID FTMS 0 0 0 2614 99241.7578125 0.7312590385977266 -19 0.2835512161254883 1 Unmodified _GPSRASSV_ ENSG00000182809|ENST00000329146|CRIP2;ENST00000548989.5_1_14:105942940-105945987:+|nuORF;ENST00000551738.1_1_14:105945069-105945470:+|nuORF;nc|ENSG00000182809|P52943-2|CRIP2 47.74868867922204 0.1498366402366518 4 GP 2 6 40.701 0.0 0.0 5.3597 0.0 0.0 0.0 602.2914522760374 602.2914522760374 11.677353201839438 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.0 + GP 5.3597 + + 188 + 1 3.382 64048.4 0.949999988079071 135 2478 2614 HBL1_DMSO_200M_050219_2,2615 HBL1_DMSO_200M_050219_2,2615,GPSRASSV False True GPSRASSV 11.148046 380.701251208782 748920.1875 2614.0 ENST00000548989.5_1_14:105942940-105945987:+|nuORF;;nc|ENSG00000182809|P52943-2|CRIP2;;ENST00000551738.1_1_14:105945069-105945470:+|nuORF;;ENSG00000182809|ENST00000329146|CRIP2 1.2329086860020957 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2617 11.152 5.9 8672200.0 25 0 1726600.0 42832 VVLDNSGK 8 59 416.2321595200887 830.4497661069774 2 416.2321960330009 MULTI CID FTMS 0 0 0 2616 11795635.0 0.8935221352415929 -4 0.0348587036132812 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 23.1484247019978 0.5573009939494978 4 VVSPASS[KG] 9 4 + 68.21 0.0 0.0 8.2136 8.2136 97.75 0.0 0.0 0.0 40.145228064086 5.686814654273675 5.686814654273675 68.21001883029645 0 0.8494850021680094 2.0 0.3807196863200844 0.3054621874040891 VVSPASS[KG] 8.2136 - 74 + 1 3.382 45256.6 1.0 136 2479 2616 HBL1_DMSO_200M_050219_2,2617 HBL1_DMSO_200M_050219_2,2617,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2623 11.183 705.0 168010.0 25 0 11276.0 34594 SPHEAVGT 8 147 399.1931247771653 796.3716966211306 2 399.1928893923759 MULTI CID FTMS 0 0 0 2622 167143.015625 0.6727425195177127 12 -0.0862846374511718 1 Unmodified _SPHEAVGT_ ENST00000393473.6_1_2:99771434-99772854:+|nuORF 18.13498045792455 0.6430038125133779 4 VDAAEK 6 7 55.75 0.0 0.0 7.0006 0.0 0.0 165.05432709163682 0.0 165.05432709163682 0.0 43.86623162815268 0.0 0.0 0 2.2302046884880937 0.0 0.9247425010840048 0.3054621874040891 VDAAEK 7.0006 - 253 + 1 3.342 93818.6 1.0 137 2484 2622 HBL1_DMSO_200M_050219_2,2623 HBL1_DMSO_200M_050219_2,2623,SPHEAVGT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2625 11.197 656.0 94124.0 25 0 4151.2 + -1 MGYFCMAEK 9 90 568.7309620136097 1135.4473710940192 2 568.7307006716728 MULTI CID FTMS 0 0 0 2624 151358.59375 0.329745857799454 12 -0.0744876861572265 1 Carbamidomethyl (C) _MGYFC(Carbamidomethyl (C))MAEK_ REV__ENST00000607690.1_1_2:190531048-190531108:+|nuORF 10.073929032068715 0.563993802247229 4 AAEK 4 -1 31.146 0.0 0.0 2.7431 0.0 0.0 718.2252164082755 0.0 718.2252164082755 0.0 19.23516269895728 0.0 0.0 0 0.0 0.0 0.5 0.3494850021680094 AAEK 2.7431 - 86 + 1 3.342 50417.6 1.0 138 2485 2624 HBL1_DMSO_200M_050219_2,2625 HBL1_DMSO_200M_050219_2,2625,MGYFCMAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2626 11.2 147.0 642000.0 25 0 41713.0 23940 LVQWLGFAT 9 119 345.5270773569149 1033.5594026709448 3 345.5269653201103 MULTI CID FTMS 0 0 0 2624 285771.40625 0.0669743952571383 -23 0.3155250549316406 2 Unmodified _LVQWLGFAT_ ENSG00000187713|ENST00000343666|TMEM203 18.13498045792455 0.3457906370836843 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 6 18.676 0.0 0.0 1.8069 0.0 0.0 0.0 601.3021948881664 601.3021948881664 1.1060317144518663 0.0 0.0 0.0 0 0.0 0.0 0.555462187404089 0.1694451763165201 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.8069 - 166 1 3.342 85529.6 1.0 139 2485 2624 HBL1_DMSO_200M_050219_2,2626 HBL1_DMSO_200M_050219_2,2626,LVQWLGFAT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2629 11.22 800.0 318390.0 25 0 22405.0 + 40355 VHQEAGEK 8 146 449.2247782654947 896.4350035977894 2 449.2251464724541 MULTI CID FTMS 0 0 0 2628 83867.625 0.2154893974550423 13 -0.0659971237182617 1 Unmodified _VHQEAGEK_ REV__nc|ENSG00000112425|B3EWF7|EPM2A 81.61307344734483 0.0848032199178113 4 QHVDAAEK 8 -1 + 85.822 0.0 0.0 9.5737 9.5737 84.177 0.0 0.0 0.0 67.60790368413548 20.216977436784177 20.216977436784177 2.218487496163561 0 1.2923849124922582 0.6575773191777937 1.2440840204505517 0.3807196863200844 QHVDAAEK;QHVADAEK;[AG]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}AAEK;[HQ][{I|L}A][DG]EK;[HQ][PS][TA]EK;{[DA]|[EG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AA{M(Oxidation (M))|F}K;{[ET]|[MV]}[KC]AA{M(Oxidation (M))|F}K;[DV]AA[HQ]EK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[HQ]EK;{[CP]|[EA]}GV[HQ]EK 9.5737;9.3262;5.5482;3.9359;3.0678;3.0616;2.7679;2.6437;2.3018;2.0741 -;-;-;-;-;-;-;-;-;- 871 + 1 3.342 198795.3 0.7300000190734863 140 2487 2628 HBL1_DMSO_200M_050219_2,2629 HBL1_DMSO_200M_050219_2,2629,VHQEAGEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2633 11.234 247.0 333860.0 25 0 61807.0 + 40290 VGVGKCSGLSK 11 87 517.7863418577356 1033.558130782271 2 517.7870361208916 MULTI CID FTMS 0 0 0 2632 329533.0625 0.1701641706487607 -67 0.5872945785522461 1 Unmodified _VGVGKCSGLSK_ REV__ENST00000593502.5_1_19:40715047-40719145:+|nuORF 10.073929032068715 0.8255972128077141 4 KTRH[WP]K 7 -1 21.955 0.0 0.0 2.1242 0.0 0.0 82.00770316604867 0.0 82.00770316604867 0.0 11.158197815704083 0.0 0.0 0 0.2742275032520141 0.0 0.3494850021680094 0.2742275032520141 KTRH[WP]K 2.1242 - 117 + 1 3.342 72123.1 1.0 141 2490 2632 HBL1_DMSO_200M_050219_2,2633 HBL1_DMSO_200M_050219_2,2633,VGVGKCSGLSK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2645 11.289 800.0 172290.0 25 0 26347.0 + 8823 EYKSGGREK 9 144 351.849861481855 1052.527755045765 3 351.8488036990166 MULTI CID FTMS 0 0 0 2644 145693.375 0.7912531190824413 -5 0.0195875167846679 1 Unmodified _EYKSGGREK_ REV__ENSG00000163781|ENST00000260810|TOPBP1 11.640296217721598 0.521594087909532 4 {[{M(Oxidation (M))|F}H]|[RQ]}HVDAAEK 9 -1 + 46.278 0.0 0.0 4.3968 4.3968 71.11 0.0 0.0 0.0 26.985929059949427 14.347878861661414 14.347878861661414 3.0102999566398125 0 0.3054621874040891 0.0 0.3252574989159953 0.3807196863200844 {[{M(Oxidation (M))|F}H]|[RQ]}HVDAAEK;{[{M(Oxidation (M))|F}H]|[RQ]}HVADAEK;{[{M(Oxidation (M))|F}H]|[RQ]}H{[RE]|[WV]}AEK;{[{M(Oxidation (M))|F}H]|[RQ]}HVDAA{[VA]|[{I|L}G]}S;{[{M(Oxidation (M))|F}H]|[RQ]}HVDA[Q{I|L}]S;{[{M(Oxidation (M))|F}H]|[RQ]}HVADA{[VA]|[{I|L}G]}S;{[{M(Oxidation (M))|F}H]|[RQ]}HVAD[Q{I|L}]S;{[{M(Oxidation (M))|F}H]|[RQ]}HVAN{[QN]|[E{I|L}]|[KN]}S;{[{M(Oxidation (M))|F}H]|[RQ]}HVA{[CT]|[{M(Oxidation (M))|F}G]}AAP;{[{M(Oxidation (M))|F}H]|[RQ]}HVAGG{[QN]|[E{I|L}]|[KN]}S 4.3968;4.1108;2.5719;2.1263;1.8607;1.8402;1.5747;1.3882;0.56131;0.51333 -;-;-;-;-;-;-;-;-;- 512 + 1 3.317 117396.4 0.6000000238418579 142 2501 2644 HBL1_DMSO_200M_050219_2,2645 HBL1_DMSO_200M_050219_2,2645,EYKSGGREK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2648 11.298 9.7 5124600.0 25 0 816600.0 + 36034 SVQHVDAAEK 10 82 361.8526730384067 1082.53618971542 3 361.8524658083916 MULTI CID FTMS 0 0 0 2647 4568514.5 0.0853617897140612 31 -0.1887598037719726 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 27.22323531849824 0.3570408936368626 4 [VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK 11 8 + 35.31 0.0 0.0 3.2617 3.2617 79.248 0.0 0.0 0.0 6.06470026316768 4.094797513443041 4.094797513443041 20.69531689649953 0 0.7117581349478641 2.0 0.2742275032520141 0.0 [VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;[WK]HVA{[CT]|[{M(Oxidation (M))|F}G]}A[PA] 3.2617;1.35 -;- 228 1 3.317 48671.9 1.0 143 2503 2647 HBL1_DMSO_200M_050219_2,2648 HBL1_DMSO_200M_050219_2,2648,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2650 11.303 32.0 1562100.0 25 0 114860.0 + 36038 SVQHVDAAEK 10 70 542.2751280319404 1082.5357031306808 2 542.2753784060478 MULTI CID FTMS 0 0 0 2649 1850653.25 0.0784948279987991 31 -0.1889381408691406 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 59.17704102725264 0.0387449460849098 4 [VS]AGHVDAAEK 11 2 + 98.639 0.0 0.0 9.1118 9.1118 94.609 0.0 0.0 0.0 15.652468443574222 15.07062321345802 15.07062321345802 9.82834818093788 0 2.6237125054200234 2.0 0.3252574989159953 0.0 [VS]AGHVDAAEK;[VS]QHVDAAEK;[VS]AGHVD[DV]GK;[VS]QHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GH[NG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GH[NG][WQ]K;[VS][KC]WK[W{M(Oxidation (M))|F}] 9.1118;8.2039;7.8911;6.9832;6.7052;5.939;5.4845;3.4755;2.8721;2.8351 -;+;-;-;-;-;-;-;-;- + 609 1 3.317 42927.8 1.0 144 2504 2649 HBL1_DMSO_200M_050219_2,2650 HBL1_DMSO_200M_050219_2,2650,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2654 11.327 800.0 148080.0 25 0 17322.0 + -1 TKAQKSMK 8 127 469.2604308941906 936.5063088551811 2 469.2603942751884 MULTI CID FTMS 0 0 0 2653 102791.265625 0.4305933820750536 -43 0.4226617813110351 1 Oxidation (M) _TKAQKSM(Oxidation (M))K_ REV__ENST00000453612.1_1_7:43810757-43831091:+|nuORF 28.486842064014134 0.4448922141344407 4 KTT{I|L}[WP]K 7 -1 40.296 0.0 0.0 4.3028 0.0 0.0 63.99745738044971 0.0 63.99745738044971 0.0 15.653754666270771 0.0 0.0 0 0.7302046884880937 0.0 1.424742501084005 0.3252574989159953 KTT{I|L}[WP]K 4.3028 - 667 + 1 3.317 94964.3 0.5899999737739563 145 2507 2653 HBL1_DMSO_200M_050219_2,2654 HBL1_DMSO_200M_050219_2,2654,TKAQKSMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2657 11.335 36.0 1161300.0 25 0 111640.0 + 29888 QRSSVGQRV 9 62 339.5235849760328 1015.5489255282984 3 339.5233642458916 MULTI CID FTMS 0 0 0 2656 1257483.5 1.0 0 0.0 1 Unmodified _QRSSVGQRV_ REV__ENST00000480503.5_1_7:45018537-45018588:-|nuORF 10.823927491677226 0.5436922275383211 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 19.935 0.0 0.0 1.963 0.0 0.0 0.0 583.2916132658902 583.2916132658902 4.701388934837798 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.963 - 34 1 3.317 42060.7 1.0 146 2509 2656 HBL1_DMSO_200M_050219_2,2657 HBL1_DMSO_200M_050219_2,2657,QRSSVGQRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2658 11.349 800.0 134990.0 25 0 41371.0 + 40004 VGDRSQPERRC 11 91 434.8822180249144 0 434.8822814822197 PEAK CID FTMS 0 0 0 2656 152899.75 0.6969965905118392 36 -0.1960268020629882 2 Unmodified _VGDRSQPERRC_ REV__ENSG00000157570|ENST00000520358|TSPAN18;REV__ENST00000517621.5_1_11:44941433-44948237:+|nuORF 2.9952420565917617 0.4761840153648598 4 DE 2 -1 7.0783 0.0 0.0 0.81571 0.0 0.0 113.38795792307263 507.2676485651001 620.6556064881727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DE 0.81571 - 10 + 1 3.317 88115.4 0.6100000143051147 147 2509 2656 HBL1_DMSO_200M_050219_2,2658 HBL1_DMSO_200M_050219_2,2658,VGDRSQPERRC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2660 11.358 300.0 184020.0 25 0 11510.0 -1 DQVTDMMIAN 10 89 577.2469438847074 1152.4793348362148 2 577.2473022341728 MULTI CID FTMS 0 0 0 2659 191546.09375 0.4031361681736131 13 -0.0885992050170898 1 Oxidation (M) _DQVTDM(Oxidation (M))MIAN_ ENSG00000124171|ENST00000371610|PARD6B;ENSG00000178184|ENST00000353265|PARD6G 13.042465956692816 0.6287021003332052 4 [AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQ 9 -1 41.771 0.0 0.0 3.6244 0.0 0.0 0.0 200.06695625638977 200.06695625638977 31.70399585277847 0.0 0.0 0.0 0 0.5 2.0 0.3807196863200844 0.0 [AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQ 3.6244 - 146 1 3.309 48279.5 1.0 148 2510 2659 HBL1_DMSO_200M_050219_2,2660 HBL1_DMSO_200M_050219_2,2660,DQVTDMMIAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2661 11.363 264.0 255490.0 25 0 19702.0 + 30442 RDSFSAEK 8 81 470.2302024325396 938.4458519318792 2 470.2305786013603 MULTI CID FTMS 0 0 0 2659 228483.90625 0.1970102398650061 -39 0.3394002914428711 2 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 24.020572477871973 0.5389365498350341 4 HVDAAEK 7 -1 70.98 0.0 0.0 7.5636 0.0 0.0 170.06916807616227 0.0 170.06916807616227 0.0 33.80796983517129 0.0 0.0 0 2.504432191740108 0.0 0.4247425010840047 0.3252574989159953 HVDAAEK 7.5636 - 225 + 1 3.309 57050.3 1.0 149 2510 2659 HBL1_DMSO_200M_050219_2,2661 HBL1_DMSO_200M_050219_2,2661,RDSFSAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2662 11.377 800.0 59044.0 25 0 2717.4 -1 0 48 859.7188059345392 2576.1345884038174 3 860.0507690310478 MULTI CID FTMS 0 0 0 2659 66916.6796875 0.793965744104977 -5 0.0465431213378906 3 4 QA 2 -1 14.464 0.0 0.0 0.56146 0.0 0.0 1754.7940865501048 619.2129000299436 2374.0069865800483 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 QA 0.56146 - 17 + 1 3.309 40233.6 0.3499999940395355 150 2510 2659 HBL1_DMSO_200M_050219_2,2662 HBL1_DMSO_200M_050219_2,2662, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2670 11.405 15.0 2967000.0 25 0 508050.0 + 42833 VVLDNSGK 8 65 416.2321595200887 830.4497661069774 2 416.2321349978447 MULTI CID FTMS 0 0 0 2669 3614330.75 0.2737864073624987 34 -0.1511449813842773 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 25.399314129420983 0.5099049743284904 4 VVSPASSGK 9 4 + 84.449 0.0 0.0 10.169 10.169 99.709 0.0 0.0 0.0 64.66799141328546 11.453428627607806 11.453428627607806 84.4489205567881 0 0.805462187404089 2.0 0.5 0.3494850021680094 VVSPASSGK 10.169 - 125 + 1 3.309 38521.4 1.0 151 2517 2669 HBL1_DMSO_200M_050219_2,2670 HBL1_DMSO_200M_050219_2,2670,VVLDNSGK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2675 11.434 800.0 174780.0 25 0 7080.5 + 37017 TFQKKTKEM 9 177 380.87434049040473 1139.6011920714143 3 380.8742248415947 MULTI CID FTMS 0 0 0 2674 133914.46875 0.372527808124398 -24 0.1597557067871093 1 Unmodified _TFQKKTKEM_ ENST00000278882.8_1_20:29631550-29631607:+|nuORF;ENST00000507103.1_1_4:190881915-190881972:+|nuORF 45.739877483867886 0.0497104363764649 4 T{M(Oxidation (M))|F}QK[RV]C(Carbamidomethyl (C))T 8 5 40.389 0.0 0.0 3.5441 0.0 0.0 0.0 116.05096613101796 116.05096613101796 12.181833573527411 0.0 0.0 0.0 0 0.66992880126082 0.0 1.305462187404089 0.0 T{M(Oxidation (M))|F}QK[RV]C(Carbamidomethyl (C))T 3.5441 - 1433 + 1 3.309 114120.4 0.4600000083446502 152 2521 2674 HBL1_DMSO_200M_050219_2,2675 HBL1_DMSO_200M_050219_2,2675,TFQKKTKEM True True TFQKKTKEM 11.433532 380.874224841595 1594301.625 2674.0 ENST00000278882.8_1_20:29631550-29631607:+|nuORF;;ENST00000507103.1_1_4:190881915-190881972:+|nuORF 4.458274841308594 3.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2680 11.45 14.0 3683400.0 25 0 343110.0 -1 TATRPITKM 9 81 345.5270773569149 1033.5594026709448 3 345.5268737673759 MULTI CID FTMS 0 0 0 2679 3181162.75 0.7455485284255423 17 -0.0691137313842773 1 Oxidation (M) _TATRPITKM(Oxidation (M))_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 6.630372943996041 0.683221206560437 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 18.898 0.0 0.0 1.8284 0.0 0.0 0.0 601.3029534608046 601.3029534608046 4.208187539523751 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.2215141619232908 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.8284 - 58 1 3.309 51441.2 1.0 153 2525 2679 HBL1_DMSO_200M_050219_2,2680 HBL1_DMSO_200M_050219_2,2680,TATRPITKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2690 11.487 32.0 1768100.0 25 0 309330.0 12290 GRYSPDVLK 9 57 517.7863418577356 1033.558130782271 2 517.7870361208916 MULTI CID FTMS 0 0 0 2689 1548197.25 0.7994575689865475 -23 0.1049203872680664 1 Unmodified _GRYSPDVLK_ ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS 6.723162845929126 0.6799819581413107 4 K 1 8 15.969 0.0 0.0 1.5451 0.0 0.0 887.4524006570742 0.0 887.4524006570742 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.1989700043360188 + K 1.5451 + + 6 + 1 3.309 51296.4 1.0 154 2534 2689 HBL1_DMSO_200M_050219_2,2690 HBL1_DMSO_200M_050219_2,2690,GRYSPDVLK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2706 11.547 78.0 847980.0 25 0 195560.0 6004 DRWGSGGQ 8 60 431.69517494078167 861.3757969483634 2 431.6954528689384 MULTI CID FTMS 0 0 0 2705 725367.75 0.5378030281124677 -53 0.2886962890625 1 Unmodified _DRWGSGGQ_ ENST00000577783.2_1_17:77079170-77080166:+|nuORF 4.3292370932331545 0.7980541185046766 4 DD 2 7 23.711 0.0 0.0 2.7527 0.0 0.0 0.0 628.2985832686641 628.2985832686641 7.998037644757048 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DD 2.7527 - 14 + 1 3.307 56727.6 1.0 155 2549 2705 HBL1_DMSO_200M_050219_2,2706 HBL1_DMSO_200M_050219_2,2706,DRWGSGGQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2708 11.552 54.0 1107000.0 25 0 165280.0 + 36035 SVQHVDAAEK 10 82 361.8526730384067 1082.53618971542 3 361.8523742556572 MULTI CID FTMS 0 0 0 2707 843784.5 0.015765946469686 78 -0.4924468994140625 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 4 HVDAAEK 7 3 37.541 0.0 0.0 3.4679 0.0 0.0 314.16082660149283 0.0 314.16082660149283 0.0 7.575929227055838 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.3252574989159953 + HVDAAEK 3.4679 + + 305 + 1 3.307 54305.2 1.0 156 2550 2707 HBL1_DMSO_200M_050219_2,2708 HBL1_DMSO_200M_050219_2,2708,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2710 11.558 201.0 299340.0 25 0 21348.0 + 36039 SVQHVDAAEK 10 80 542.2751280319404 1082.5357031306808 2 542.2753784060478 MULTI CID FTMS 0 0 0 2709 324260.90625 0.0137534160236816 78 -0.4916944503784179 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 74.09353968926766 0.0188047629662086 4 [VS]QHVDAAEK 10 0 + 113.52 0.0 0.0 10.487 10.487 93.4 0.0 0.0 0.0 12.538686066858872 12.538686066858872 12.538686066858872 9.164539485499262 0 3.385151878060192 2.0 0.805462187404089 0.8252574989159953 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAEK;[VS]AGHVD[DV]GK;[VS]AGHV{[CP]|[EA]}GEK;[VS]AGHV{[CP]|[EA]}EGK;[VS]QHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[VS]QHV{[CP]|[EA]}GEK 10.487;9.6402;9.3286;7.7785;7.2459;7.2235;7.167;6.922;6.7904;6.6344 +;-;-;-;-;-;-;-;-;- + 1357 + 1 3.307 49914.0 1.0 157 2551 2709 HBL1_DMSO_200M_050219_2,2710 HBL1_DMSO_200M_050219_2,2710,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2717 11.594 800.0 77926.0 25 0 5848.6 + 6108 DSTRPSSV 8 117 424.7092518415405 847.403950749881 2 424.7088806033134 MULTI CID FTMS 0 0 0 2716 62278.20703125 0.4051469440964431 -39 0.1723842620849609 1 Unmodified _DSTRPSSV_ REV__ENSG00000136643|ENST00000366960|RPS6KC1;REV__nc|ENSG00000136643|Q96S38-2|RPS6KC1 15.847184025352805 0.6768015514314958 4 TV 2 -1 20.573 0.0 0.0 2.4278 0.0 0.0 629.2773313424576 0.0 629.2773313424576 0.0 6.4928876664371415 0.0 0.0 0 0.5 0.0 0.0 0.0 TV 2.4278 - 111 + 1 3.307 53161.2 0.4600000083446502 158 2557 2716 HBL1_DMSO_200M_050219_2,2717 HBL1_DMSO_200M_050219_2,2717,DSTRPSSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2719 11.599 55.0 825360.0 25 0 73656.0 31855 RTGSGKSARP 10 72 339.5235849760328 1015.5489255282984 3 339.5233337283134 MULTI CID FTMS 0 0 0 2718 834543.5 0.6636615907882688 49 -0.3380517959594726 1 Unmodified _RTGSGKSARP_ ENST00000591767.5_1_19:1093898-1095319:-|nuORF 15.248480904072842 0.5916873121453583 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 7 24.391 0.0 0.0 2.4018 0.0 0.0 0.0 583.2923697023797 583.2923697023797 17.63924561548813 0.0 0.0 0.0 0 0.5 0.0 0.6203715150305281 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 2.4018 - 58 1 3.307 46074.6 1.0 159 2558 2718 HBL1_DMSO_200M_050219_2,2719 HBL1_DMSO_200M_050219_2,2719,RTGSGKSARP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2720 11.609 602.0 154930.0 25 0 39933.0 + -1 DMVHELQRMK 10 72 434.8821624059175 0 434.8822814822197 PEAK CID FTMS 0 0 0 2718 129790.09375 0.6843211582281459 -302 1.7736577987670898 2 Oxidation (M) _DM(Oxidation (M))VHELQRMK_ REV__ENSG00000163808|ENST00000326047|KIF15;REV__nc|ENSG00000163808|Q9NS87-2|KIF15;REV__nc|ENSG00000163808|Q9NS87-3|KIF15;REV__nc|ENSG00000163808|Q9NS87-4|KIF15 0.6976657623105312 0.3961065659209837 4 R 1 -1 2.2185 0.0 0.0 0.25566 0.0 0.0 600.5821084528865 108.04598413638904 708.6280925892755 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.25566 + + 4 + 1 3.307 79495.4 1.0 160 2558 2718 HBL1_DMSO_200M_050219_2,2720 HBL1_DMSO_200M_050219_2,2720,DMVHELQRMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2722 11.614 67.0 864090.0 25 0 80481.0 + 30443 RDSFSAEK 8 70 470.2302024325396 938.4458519318792 2 470.2301513552666 MULTI CID FTMS 0 0 0 2721 941465.5 0.8117785931788267 10 -0.0610122680664062 1 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 24.020572477871973 0.5389365498350341 4 HVDAAEK 7 -1 69.033 0.0 0.0 7.3561 0.0 0.0 170.06887931901025 0.0 170.06887931901025 0.0 31.40887598185621 0.0 0.0 0 2.4604093769761874 0.0 0.3252574989159953 0.3252574989159953 HVDAAEK 7.3561 - 233 + 1 3.307 51766.5 1.0 161 2559 2721 HBL1_DMSO_200M_050219_2,2722 HBL1_DMSO_200M_050219_2,2722,RDSFSAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2723 11.622 408.0 230920.0 25 0 47400.0 + 4124 DAPAGRKV 8 92 407.2329422794709 812.4513316257419 2 407.2325012087822 MULTI CID FTMS 0 0 0 2721 154249.03125 0.5828987348797882 -13 0.0789785385131836 2 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 23.1484247019978 0.5573009939494978 4 DAPA 4 4 56.186 0.0 0.0 6.9156 0.0 0.0 0.0 455.2733553522094 455.2733553522094 46.27079196749507 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + DAPA 6.9156 + + 57 + 1 3.307 76502.5 1.0 162 2559 2721 HBL1_DMSO_200M_050219_2,2723 HBL1_DMSO_200M_050219_2,2723,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2727 11.646 800.0 66985.0 25 0 4303.2 -1 DQVTDMMIAN 10 104 577.2468603564921 1152.479167779784 2 577.2476074099541 MULTI CID FTMS 0 0 0 2726 50886.54296875 0.5189965670491539 1 -0.0163183212280273 1 Oxidation (M) _DQVTDM(Oxidation (M))MIAN_ ENSG00000124171|ENST00000371610|PARD6B;ENSG00000178184|ENST00000353265|PARD6G 6.2057823575117 0.6979311171683138 4 QAED 4 -1 18.928 0.0 0.0 1.6424 0.0 0.0 331.1481525638986 375.1424349420532 706.2905875059517 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QAED 1.6424 - 70 + 1 3.307 43374.3 0.5099999904632568 163 2562 2726 HBL1_DMSO_200M_050219_2,2727 HBL1_DMSO_200M_050219_2,2727,DQVTDMMIAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2731 11.659 23.0 1819800.0 25 0 337560.0 + 42834 VVSPKSQS 8 58 416.2321382184702 830.4497235037404 2 416.2321349978447 MULTI CID FTMS 0 0 0 2730 2464538.75 0.9483063791407428 1 -0.0047369003295898 1 Unmodified _VVLDNSGK_ ENST00000329099.4_3_17:292627-292744:-|nuORF 23.1484247019978 0.5573009939494978 4 VVSPASS[KG] 9 4 + 68.918 0.0 0.0 8.2989 8.2989 97.919 0.0 0.0 0.0 46.29879372956886 6.417002536801313 6.417002536801313 68.91781960619177 0 0.7742275032520141 2.0 0.4247425010840047 0.3494850021680094 VVSPASS[KG] 8.2989 - 82 + 1 3.307 43259.0 1.0 164 2565 2730 HBL1_DMSO_200M_050219_2,2731 HBL1_DMSO_200M_050219_2,2731,VVLDNSGK False False VVSPKSQS 11.658649 416.232134997845 100557912.0 2730.0 ENST00000329099.4_3_17:292627-292744:-|nuORF 0.2106344054142634 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2743 11.703 42.0 1307200.0 25 0 114080.0 + 38405 TRATQTMII 9 79 345.5270773569149 1033.5594026709448 3 345.5268432497978 MULTI CID FTMS 0 0 0 2742 1157733.875 0.271330596592284 68 -0.4575643539428711 1 Unmodified _TRATQTMII_ REV__ENST00000464356.6_2_1:156435963-156436056:-|nuORF 9.38312468134398 0.5871240394367778 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 16.682 0.0 0.0 1.6141 0.0 0.0 0.0 601.3029520139705 601.3029520139705 4.208187539523749 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.6141 + + 75 1 3.307 53633.2 1.0 165 2576 2742 HBL1_DMSO_200M_050219_2,2743 HBL1_DMSO_200M_050219_2,2743,TRATQTMII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2747 11.727 800.0 90929.0 25 0 7207.4 + -1 PASFLDPC 8 107 474.711909893507 947.409266853814 2 474.7119628787041 MULTI CID FTMS 0 0 0 2746 86138.3828125 0.7007414286434276 -12 0.0481042861938476 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))PASFLDPC(Carbamidomethyl (C))_ REV__ENST00000520105.5_1_8:142441191-142441554:+|nuORF 19.438996006549623 0.6237395211498085 4 STHEQH 6 -1 63.607 0.0 0.0 6.7138 0.0 0.0 210.10056943857504 0.0 210.10056943857504 0.0 46.21645960868548 0.0 0.0 0 2.024227503252014 0.0 0.5 0.5 STHEQH 6.7138 - 414 + 1 3.307 60897.9 0.4900000095367431 166 2579 2746 HBL1_DMSO_200M_050219_2,2747 HBL1_DMSO_200M_050219_2,2747,PASFLDPC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2750 11.739 330.0 252920.0 25 0 47671.0 36103 SVRSPTPYKK 10 88 388.2254160318034 1161.6544186956105 3 388.5596801638603 MULTI CID FTMS 0 0 0 2749 99447.1171875 0.1365174961869314 -30 0.1791419982910156 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 15.248480904072842 0.5916873121453583 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 36.882 12.621 2.9404 3.1749 3.1749 46.304 0.0 0.0 0.0 0.0 27.81354280867589 0.0 0.0 0 0.7742275032520141 0.0 1.1307196863200843 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 3.1749 - 128 + 1 3.307 74316.8 1.0 167 2581 2749 HBL1_DMSO_200M_050219_2,2750 HBL1_DMSO_200M_050219_2,2750,SVRSPTPYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2752 11.745 140.0 423680.0 25 0 64382.0 36967 TFEHLFIK 8 66 517.7863418577356 1033.558130782271 2 517.7870361208916 MULTI CID FTMS 0 0 0 2751 413052.25 0.2132917802621233 25 -0.1927509307861328 1 Unmodified _TFEHLFIK_ ENSG00000116678|ENST00000349533|LEPR 9.347437153973935 0.7675937258251505 4 {M(Oxidation (M))|F}K 2 6 18.594 0.0 0.0 1.7991 0.0 0.0 740.4176106180117 0.0 740.4176106180117 0.0 5.0995558483082775 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 {M(Oxidation (M))|F}K 1.7991 - 20 + 1 3.307 51865.0 1.0 168 2582 2751 HBL1_DMSO_200M_050219_2,2752 HBL1_DMSO_200M_050219_2,2752,TFEHLFIK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2753 11.746 27.0 2043300.0 25 0 402620.0 + 28190 PQDESISFQQR 11 69 445.5506367488515 1333.6300808467545 3 445.5509521365166 MULTI CID FTMS 0 0 0 2751 1265216.0 0.1250629038088447 -20 0.1098575592041015 2 Unmodified _PQDESISFQQR_ REV__ENSG00000169184|ENST00000302326|MN1 12.240655878213236 0.7805268987462184 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F} + + 34.354 9.6927 1.4482 2.576 2.576 45.21 0.0 0.0 0.0 0.0 21.30674456733729 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.7614393726401688 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 2.576 - 120 + 1 3.307 50665.0 1.0 169 2582 2751 HBL1_DMSO_200M_050219_2,2753 HBL1_DMSO_200M_050219_2,2753,PQDESISFQQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2754 11.76 800.0 191200.0 25 0 42929.0 + 30577 RERHYTDRVC 10 80 667.8222193589503 1333.6298857847005 2 667.8236572146416 MULTI CID FTMS 0 0 0 2751 106869.21875 0.0907300930856214 -25 0.1616659164428711 3 Unmodified _RERHYTDRVC_ REV__ENSG00000140107|ENST00000361529|SLC25A47 8.155526934196011 0.6889124077178598 4 HTAM 4 -1 26.146 0.0 0.0 1.9605 0.0 0.0 875.4200916974625 0.0 875.4200916974625 0.0 3.187587626244124 0.0 0.0 0 0.0 0.0 0.5 0.0 HTAM 1.9605 - 58 1 3.307 111619.4 0.4399999976158142 170 2582 2751 HBL1_DMSO_200M_050219_2,2754 HBL1_DMSO_200M_050219_2,2754,RERHYTDRVC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2765 11.8 52.0 1348600.0 25 0 328990.0 6005 DRWGSGGQ 8 66 431.69517494078167 861.3757969483634 2 431.6955139040947 MULTI CID FTMS 0 0 0 2764 1305499.875 0.9679252847613476 -10 0.0562076568603515 1 Unmodified _DRWGSGGQ_ ENST00000577783.2_1_17:77079170-77080166:+|nuORF 4.3292370932331545 0.7980541185046766 4 DD 2 7 25.217 0.0 0.0 2.9275 0.0 0.0 0.0 628.2999320323715 628.2999320323715 8.957465275951613 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DD 2.9275 - 5 + 1 3.312 60089.9 1.0 171 2592 2764 HBL1_DMSO_200M_050219_2,2765 HBL1_DMSO_200M_050219_2,2765,DRWGSGGQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2767 11.805 123.0 516060.0 25 0 67314.0 + 36040 SVQHVDAAEK 10 91 361.8526364218279 1082.5360798656836 3 361.8524047732353 MULTI CID FTMS 0 0 0 2766 383011.03125 0.0839640204256875 30 -0.2191686630249023 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 4 HVDAAEK 7 3 30.111 0.0 0.0 2.7816 0.0 0.0 314.1597664069133 0.0 314.1597664069133 0.0 8.896613669973448 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.3252574989159953 + HVDAAEK 2.7816 + + 366 + 1 3.312 59790.9 1.0 172 2593 2766 HBL1_DMSO_200M_050219_2,2767 HBL1_DMSO_200M_050219_2,2767,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2769 11.819 602.0 119950.0 25 0 8230.5 + 36041 SVQHVDAAEK 10 92 542.275166461122 1082.535779989044 2 542.2756225466728 MULTI CID FTMS 0 0 0 2768 165269.453125 0.0830894700389311 30 -0.2180862426757812 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 4 [VS]AGHVDAAEK 11 2 + 96.413 0.0 0.0 8.9062 8.9062 83.088 0.0 0.0 0.0 1.8366202500996136 1.8366202500996136 1.8366202500996136 1.8366202500996136 0 3.048455006504028 2.0 0.7059771852360797 0.0 [VS]AGHVDAAEK;[VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVD[DV]GK;[VS]QHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;{[QV]|[N{I|L}]|[RA]|[KV]}SHVDAAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVD[DV]GK;[HQ][VS]VDAAEK;[HV]{[QS]|[NT]}VDAAEK 8.9062;8.7365;7.89;7.3338;6.704;6.615;5.6689;5.0427;4.4723;4.1206 -;+;-;-;-;-;-;-;-;- + 1153 1 3.312 60976.2 1.0 173 2594 2768 HBL1_DMSO_200M_050219_2,2769 HBL1_DMSO_200M_050219_2,2769,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2774 11.839 354.0 349350.0 25 0 23855.0 + 10460 FTIFACWYQR 10 132 334.41515396158144 1333.6315099799258 4 334.4148437380791 MULTI CID FTMS 0 0 0 2773 139556.0625 0.3801364843158802 -11 0.0544443130493164 1 Unmodified _FTIFACWYQR_ REV__ENST00000472270.1_1_X:70756118-70756274:+|nuORF 6.723162845929126 0.6955379296933136 4 [AG]G{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP]SE{M(Oxidation (M))|F}QR 12 -1 [AG]G{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP]SE + + 30.005 2.8175 0.31858 2.2499 2.2499 44.795 0.0 0.0 0.0 0.0 16.90614065464281 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [AG]G{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP]SE{M(Oxidation (M))|F}QR 2.2499 - 191 + 1 3.312 101993.0 1.0 174 2598 2773 HBL1_DMSO_200M_050219_2,2774 HBL1_DMSO_200M_050219_2,2774,FTIFACWYQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2775 11.853 800.0 99806.0 25 0 9352.5 32688 SDVAWASL 8 122 424.7092518415405 847.403950749881 2 424.7089721560478 MULTI CID FTMS 0 0 0 2773 136111.78125 0.8854665999181738 2 -0.0266351699829101 2 Unmodified _SDVAWASL_ ENSG00000160294|ENST00000291688|MCM3AP;ENST00000467026.5_1_21:47655184-47679082:-|nuORF;ENST00000486937.5_1_21:47666536-47687014:-|nuORF;ENST00000496607.5_1_21:47655184-47686088:-|nuORF;nc|ENSG00000160294|O60318-2|MCM3AP 23.1484247019978 0.5573009939494978 4 TV 2 7 22.563 0.0 0.0 2.6626 0.0 0.0 629.2772092721451 0.0 629.2772092721451 0.0 7.346368802282015 0.0 0.0 0 0.5 0.0 0.2614393726401688 0.0 TV 2.6626 - 181 + 1 3.312 67406.4 0.5899999737739563 175 2598 2773 HBL1_DMSO_200M_050219_2,2775 HBL1_DMSO_200M_050219_2,2775,SDVAWASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2778 11.873 800.0 96483.0 25 0 17667.0 + -1 PLLDGMGC 8 103 439.6926324503689 877.3707119675379 2 439.6928588747978 MULTI CID FTMS 0 0 0 2777 62144.265625 0.6970008113967064 1 -0.0163192749023437 1 Carbamidomethyl (C),Oxidation (M) _PLLDGM(Oxidation (M))GC(Carbamidomethyl (C))_ REV__ENST00000520794.1_1_5:179290450-179293075:-|nuORF 2.577480529830294 0.808687252328423 4 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KEY 6 -1 23.019 0.0 0.0 2.6236 0.0 0.0 63.99711040759912 0.0 63.99711040759912 0.0 10.54486844203226 0.0 0.0 0 0.0 0.0 0.6643943297944485 0.0 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KEY 2.6236 - 48 + 1 3.312 66137.3 0.4900000095367431 176 2600 2777 HBL1_DMSO_200M_050219_2,2778 HBL1_DMSO_200M_050219_2,2778,PLLDGMGC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2780 11.89 800.0 116850.0 25 0 7943.9 31811 RSYAADEK 8 107 470.2302165760536 938.4458802189072 2 470.2310058474541 MULTI CID FTMS 0 0 0 2779 126515.765625 0.3494850916740201 -45 0.2994012832641601 1 Unmodified _RSYAADEK_ ENSG00000185760|ENST00000370398|KCNQ5;nc|ENSG00000185760|Q9NR82-2|KCNQ5;nc|ENSG00000185760|Q9NR82-3|KCNQ5;nc|ENSG00000185760|Q9NR82-4|KCNQ5;nc|ENSG00000185760|Q9NR82-5|KCNQ5;nc|ENSG00000185760|Q9NR82-6|KCNQ5;nc|ENSG00000185760|Q9NR82-7|KCNQ5 24.020572477871973 0.5389365498350341 4 HVDAAEK 7 4 69.729 0.0 0.0 7.4303 0.0 0.0 170.06873282077703 0.0 170.06873282077703 0.0 43.86577933228914 0.0 0.0 0 2.5356668758921828 0.0 0.6861818737241735 0.3054621874040891 HVDAAEK 7.4303 - 246 + 1 3.312 74832.5 0.5400000214576721 177 2601 2779 HBL1_DMSO_200M_050219_2,2780 HBL1_DMSO_200M_050219_2,2780,RSYAADEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2783 11.91 800.0 84100.0 25 0 10745.0 -1 VRLKEDMKK 9 77 581.8343194055465 1161.6540858778928 2 581.8342773318291 MULTI CID FTMS 0 0 0 2782 56268.22265625 0.5657806269222947 -26 0.1908645629882812 1 Oxidation (M) _VRLKEDM(Oxidation (M))KK_ ENSG00000138640|ENST00000264344|FAM13A 13.90604991867851 0.4602628045680013 4 T{M(Oxidation (M))|F}KK 4 -1 28.188 0.0 0.0 2.4265 0.0 0.0 639.3702870099625 0.0 639.3702870099625 0.0 9.453781259591093 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}KK 2.4265 - 47 1 3.312 53130.9 0.5 178 2603 2782 HBL1_DMSO_200M_050219_2,2783 HBL1_DMSO_200M_050219_2,2783,VRLKEDMKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2785 11.924 690.0 142220.0 25 0 18136.0 42835 VVLDNSGK 8 102 416.2321382184702 830.4497235037404 2 416.2318603396416 MULTI CID FTMS 0 0 0 2784 135234.984375 0.0520357808802199 40 -0.2456226348876953 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 15.847184025352805 0.6768015514314958 4 VVSPASSGK 9 4 + 53.68 0.0 0.0 6.464 6.464 88.785 0.0 0.0 0.0 30.67551250554657 10.45568558511532 10.45568558511532 10.177287669604311 0 0.805462187404089 2.0 0.0 0.4124379954164592 VVSPASSGK;VVSE{[NV]|[RG]}GK;VVSE{[QN]|[E{I|L}]|[KN]}R;VVSE[R{I|L}]E;VVSPHHR 6.464;5.2384;4.9676;4.6949;4.6051 -;-;-;-;- 163 + 1 3.312 82512.2 1.0 179 2604 2784 HBL1_DMSO_200M_050219_2,2785 HBL1_DMSO_200M_050219_2,2785,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2789 11.949 800.0 34721.0 25 0 1885.3 -1 0 68 926.4299089558856 1850.8452649785709 2 926.4310180544852 MULTI CID FTMS 0 0 0 2788 71806.875 0.8307604285909906 1 -0.0163040161132812 1 4 SGGG[RD] 6 -1 26.406 0.0 0.0 1.4267 0.0 0.0 1303.6098678669084 0.0 1303.6098678669084 0.0 6.988927071389739 0.0 0.0 0 0.0 0.0 0.0 1.4802046884880935 SGGG[RD] 1.4267 - 472 + 1 3.3 23501.5 0.449999988079071 180 2607 2788 HBL1_DMSO_200M_050219_2,2789 HBL1_DMSO_200M_050219_2,2789, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2796 11.981 579.0 120100.0 25 0 15441.0 -1 IRAPTTMK 8 96 467.2628620965389 932.511171259878 2 467.2625305056572 MULTI CID FTMS 0 0 0 2795 84485.2421875 0.2374955297097401 -49 0.3182868957519531 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 19.256988751693697 0.6264283240490721 4 KTT 3 -1 37.435 0.0 0.0 4.0144 0.0 0.0 63.99758018531413 535.3007266320573 599.2983068173714 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 1.274227503252014 0.0 KTT 4.0144 - 96 + 1 3.3 59921.1 1.0 181 2613 2795 HBL1_DMSO_200M_050219_2,2796 HBL1_DMSO_200M_050219_2,2796,IRAPTTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2799 11.989 50.0 1066400.0 25 0 116300.0 36104 SVRSPTPYKK 10 76 388.2254160318034 1161.6544186956105 3 388.2253600955009 MULTI CID FTMS 0 0 0 2798 912441.5625 0.8168701083272708 4 -0.0190200805664062 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 15.248480904072842 0.5916873121453583 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 33.999 17.224 4.0126 2.9268 2.9268 45.764 0.0 0.0 0.0 0.0 21.92114579625538 0.0 0.0 0 0.8807196863200843 0.0 0.3494850021680094 0.2134679910804404 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 2.9268 - 99 + 1 3.3 52482.7 1.0 182 2615 2798 HBL1_DMSO_200M_050219_2,2799 HBL1_DMSO_200M_050219_2,2799,SVRSPTPYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2803 12.002 5.3 7369700.0 25 0 424720.0 + 28191 PQDESISFQQR 11 66 445.5506367488515 1333.6300808467545 3 445.5512878298759 MULTI CID FTMS 0 0 0 2802 7059053.5 0.6977668072898138 16 -0.1114540100097656 1 Unmodified _PQDESISFQQR_ REV__ENSG00000169184|ENST00000302326|MN1 8.155526934196011 0.8366696279279818 4 PNNT{M(Oxidation (M))|F}QR 7 -1 39.429 0.0 0.0 2.9565 0.0 0.0 458.20388563366697 0.0 458.20388563366697 0.0 25.004632150221227 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 PNNT{M(Oxidation (M))|F}QR 2.9565 - 306 + 1 3.3 36576.5 1.0 183 2618 2802 HBL1_DMSO_200M_050219_2,2803 HBL1_DMSO_200M_050219_2,2803,PQDESISFQQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2804 12.004 75.0 868980.0 25 0 205020.0 10716 FWTSFIFCQR 10 36 667.8222193589503 1333.6298857847005 2 667.8230468630791 MULTI CID FTMS 0 0 0 2802 753853.875 0.6400087232948585 11 -0.046213150024414 2 Unmodified _FWTSFIFCQR_ ENST00000299505.6_1_19:34791118-34791184:+|nuORF 1.4819007175156935 0.719781833666733 4 R 1 9 15.485 0.0 0.0 1.1611 0.0 0.0 1159.5182047317692 0.0 1159.5182047317692 0.0 15.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 1.1611 + + 1 + 1 3.3 54015.6 1.0 184 2618 2802 HBL1_DMSO_200M_050219_2,2804 HBL1_DMSO_200M_050219_2,2804,FWTSFIFCQR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2816 12.06 800.0 138290.0 25 0 29472.0 7450 EGPAGVRK 8 115 407.2321311230636 812.4497093129272 2 407.2318298220634 MULTI CID FTMS 0 0 0 2815 62981.91796875 0.3511714433421883 -48 0.3125524520874023 1 Unmodified _EGPAGVRK_ ENST00000523135.1_1_5:179680521-179691830:-|nuORF 12.531546534597751 0.7257836412119636 4 {[DA]|[EG]}PA 4 4 36.995 0.0 0.0 4.5535 0.0 0.0 0.0 455.2739657037719 455.2739657037719 26.398852450848924 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {[DA]|[EG]}PA 4.5535 + + 40 + 1 3.3 89608.6 0.4600000083446502 185 2629 2815 HBL1_DMSO_200M_050219_2,2816 HBL1_DMSO_200M_050219_2,2816,EGPAGVRK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2817 12.074 800.0 127960.0 25 0 9986.9 + 28470 PTGKAKGK 8 132 393.7451851874762 785.4758174417524 2 393.7451049685478 MULTI CID FTMS 0 0 0 2815 89226.9921875 0.7264233784445951 -12 0.0501747131347656 2 Unmodified _PTGKAKGK_ REV__ENSG00000141013|ENST00000268699|GAS8;REV__ENST00000563980.5_1_16:90088575-90097598:+|nuORF 12.531546534597751 0.7257836412119636 4 K 1 -1 25.044 0.0 0.0 3.1884 0.0 0.0 639.3700415401884 0.0 639.3700415401884 0.0 4.075221787320515 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 K 3.1884 + + 96 + 1 3.3 84170.2 0.4600000083446502 186 2629 2815 HBL1_DMSO_200M_050219_2,2817 HBL1_DMSO_200M_050219_2,2817,PTGKAKGK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2819 12.078 72.0 830260.0 25 0 181470.0 -1 GALRCNGD 8 60 431.69517494078167 861.3757969483634 2 431.6953918337822 MULTI CID FTMS 0 0 0 2818 684222.9375 0.5072973918285004 28 -0.2106943130493164 1 Carbamidomethyl (C) _GALRC(Carbamidomethyl (C))NGD_ ENSG00000070018|ENST00000261349|LRP6;ENST00000540415.1_1_12:12283717-12288148:-|nuORF 2.577480529830294 0.808687252328423 4 DD 2 -1 23.711 0.0 0.0 2.7527 0.0 0.0 0.0 628.2983296921043 628.2983296921043 18.226825097560425 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DD 2.7527 - 2 + 1 3.3 55958.9 1.0 187 2630 2818 HBL1_DMSO_200M_050219_2,2819 HBL1_DMSO_200M_050219_2,2819,GALRCNGD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2820 12.08 73.0 999140.0 25 0 141600.0 + 36042 SVQHVDAAEK 10 100 361.8526375557972 1082.5360832675915 3 361.8523742556572 MULTI CID FTMS 0 0 0 2818 616724.875 0.4527168291353775 -20 0.1174163818359375 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 37.77132515983256 0.1811013699114492 4 HVDAAEK 7 3 41.393 0.0 0.0 3.8237 0.0 0.0 314.160003111413 0.0 314.160003111413 0.0 16.198660554854385 0.0 0.0 0 0.75 0.0 0.2614393726401688 0.3054621874040891 + HVDAAEK 3.8237 + + 302 + 1 3.3 65537.6 1.0 188 2630 2818 HBL1_DMSO_200M_050219_2,2820 HBL1_DMSO_200M_050219_2,2820,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2821 12.084 215.0 250260.0 25 0 19780.0 + 36045 SVQHVDAAEK 10 76 542.2751392111567 1082.5357254891132 2 542.2752563357353 MULTI CID FTMS 0 0 0 2818 330712.78125 0.5739163723188462 -45 0.3057079315185547 3 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 74.09353968926766 0.0188047629662086 4 [VS]QHVDAAEK 10 0 + 117.06 0.0 0.0 10.814 10.814 93.453 0.0 0.0 0.0 16.645967459697715 16.645967459697715 16.645967459697715 9.164539485499262 0 3.2658715643802765 2.0 0.8807196863200843 0.8252574989159953 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAEK;[VS]QHVD[DV]GK;[VS]AGHVDAAA[VS];[VS]AGHVD[DV]GK;[VS][AG]HVD[DV]GK;[VS]AGHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EK;[VS]QHVDAAA[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK 10.814;9.9672;9.2761;8.5591;7.9185;7.8244;7.7125;7.1487;7.0072;6.8695 +;-;-;-;-;-;-;-;-;- + 1075 + 1 3.3 46053.4 1.0 189 2630 2818 HBL1_DMSO_200M_050219_2,2821 HBL1_DMSO_200M_050219_2,2821,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2825 12.109 800.0 80434.0 25 0 6174.9 + 32661 SDANKNTV 8 112 424.7092518415405 847.403950749881 2 424.7092162966728 MULTI CID FTMS 0 0 0 2824 67273.75 0.437645133501221 37 -0.2532920837402344 1 Unmodified _SDANKNTV_ REV__ENSG00000196588|ENST00000355630|MRTFA;REV__nc|ENSG00000196588|Q969V6|MRTFA 15.847184025352805 0.6768015514314958 4 V 1 -1 20.485 0.0 0.0 2.4173 0.0 0.0 730.324542035817 0.0 730.324542035817 0.0 4.247425010840047 0.0 0.0 0 0.5 0.0 0.0 0.0 V 2.4173 + + 49 + 1 3.3 55659.6 0.4399999976158142 190 2633 2824 HBL1_DMSO_200M_050219_2,2825 HBL1_DMSO_200M_050219_2,2825,SDANKNTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2831 12.131 186.0 295090.0 25 0 24422.0 + 30444 RDSFSAEK 8 80 470.2302165760536 938.4458802189072 2 470.2301513552666 MULTI CID FTMS 0 0 0 2830 291228.71875 0.8044854723650269 -8 0.0510120391845703 1 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 18.1463463914782 0.6428359029697936 4 HVDAAEK 7 -1 66.948 0.0 0.0 7.1339 0.0 0.0 170.0696736753734 0.0 170.0696736753734 0.0 37.07789158229879 0.0 0.0 0 2.504432191740108 0.0 0.4247425010840047 0.2742275032520141 HVDAAEK 7.1339 - 263 + 1 3.3 48989.6 1.0 191 2638 2830 HBL1_DMSO_200M_050219_2,2831 HBL1_DMSO_200M_050219_2,2831,RDSFSAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2837 12.155 342.0 227330.0 25 0 9050.2 + 32480 SAKFVMESV 9 127 333.1735974607896 996.4989629825689 3 333.1732665896416 MULTI CID FTMS 0 0 0 2836 100838.4453125 0.5221325373804752 -10 0.0544490814208984 1 Unmodified _SAKFVMESV_ REV__ENSG00000106278|ENST00000393386|PTPRZ1;REV__nc|ENSG00000106278|P23471-2|PTPRZ1;REV__nc|ENSG00000106278|P23471-3|PTPRZ1 7.289230182591677 0.6602208344931196 4 {[QN]|[E{I|L}]|[KN]}[HV]WQSV 8 -1 {[QN]|[E{I|L}]|[KN]}[HV]W + + 11.009 -4.4718 -0.67313 1.1047 1.1047 44.244 0.0 0.0 0.0 0.0 1.175748672893409 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 {[QN]|[E{I|L}]|[KN]}[HV]WQSV 1.1047 - 50 + 1 3.3 67415.2 1.0 192 2643 2836 HBL1_DMSO_200M_050219_2,2837 HBL1_DMSO_200M_050219_2,2837,SAKFVMESV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2841 12.169 135.0 409250.0 25 0 72871.0 + 36198 SVVSVNNL 8 67 416.2320884857456 830.4496240382912 2 416.2321044802666 MULTI CID FTMS 0 0 0 2840 468648.25 0.7320441352486464 -30 0.1738872528076172 1 Unmodified _SVVSVNNL_ REV__ENSG00000135999|ENST00000258484|EPC2 16.942295170755138 0.6606234159769251 4 VVSPASSGK 9 -1 + 62.507 0.0 0.0 7.5269 7.5269 94.539 0.0 0.0 0.0 35.24404079105772 10.577505373956775 10.577505373956775 20.81978040647692 0 0.7742275032520141 2.0 0.3252574989159953 0.3252574989159953 VVSPASSGK;VVSE{I|L}{[RE]|[WV]};VVSE{[NV]|[RG]}GK 7.5269;5.0198;4.8222 -;-;- 103 + 1 3.3 49300.4 1.0 193 2646 2840 HBL1_DMSO_200M_050219_2,2841 HBL1_DMSO_200M_050219_2,2841,SVVSVNNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2842 12.182 800.0 68260.0 25 0 6815.5 + 19203 LEGEESRMSGE 11 76 620.2613952299112 1238.5082375266222 2 620.2622558474541 MULTI CID FTMS 0 0 0 2840 84012.59375 0.2933628849224151 -19 0.1279430389404297 2 Oxidation (M) _LEGEESRM(Oxidation (M))SGE_ CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__Q7Z794;ENSG00000167768|ENST00000252244|KRT1;ENSG00000189182|ENST00000341809|KRT77 49.74193281347159 0.1190592179673825 4 {I|L}EGEES 6 5 74.117 0.0 0.0 5.9844 0.0 0.0 0.0 591.2167452447874 591.2167452447874 50.97485843954192 0.0 0.0 0.0 0 1.305462187404089 2.0 0.3807196863200844 0.0 + {I|L}EGEES 5.9844 + + 86 + 1 3.3 47790.0 0.4300000071525574 194 2646 2840 HBL1_DMSO_200M_050219_2,2842 HBL1_DMSO_200M_050219_2,2842,LEGEESRMSGE True False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 2843 12.195 714.0 72472.0 25 0 4287.4 -1 YLCLDKSV 8 98 499.2569858391269 996.4994187450538 2 499.2566711306572 MULTI CID FTMS 0 0 0 2840 105216.4921875 1.0 0 0.0 3 Carbamidomethyl (C) _YLC(Carbamidomethyl (C))LDKSV_ ENSG00000103051|ENST00000323786|COG4;ENST00000530314.5_1_16:70543112-70557304:-|nuORF;ENST00000562200.5_1_16:70543798-70557434:-|nuORF;nc|ENSG00000103051|Q9H9E3-2|COG4;nc|ENSG00000103051|Q9H9E3-3|COG4;nc|ENSG00000103051|Q9H9E3|COG4 15.847184025352805 0.6768015514314958 4 {[DA]|[EG]}NQHVKSV 9 -1 + 67.374 0.0 0.0 6.7611 6.7611 88.601 0.0 0.0 0.0 24.76203644159419 56.40478432233856 24.76203644159419 9.208187539523747 0 1.242992819099939 2.0 0.0 0.6861818737241735 {[DA]|[EG]}NQHVKSV;{[DA]|[EG]}GGQHVKSV;{[DA]|[EG]}N[AG]HVKSV;{[QN]|[E{I|L}]|[KN]}{[DA]|[EG]}HVKSV;{[QN]|[E{I|L}]|[KN]}H{[DA]|[EG]}VKSV;{[QN]|[E{I|L}]|[KN]}H{[VA]|[{I|L}G]}DKSV;{[QN]|[E{I|L}]|[KN]}{[DA]|[EG]}H[WK]V;{[QN]|[E{I|L}]|[KN]}H{[DA]|[EG]}[WK]V;[HV][WD][WR]V 6.7611;5.837;5.837;3.3512;2.5256;1.5618;1.4537;0.62815;0.1219 -;-;-;-;-;-;-;-;- 156 1 3.3 45114.2 1.0 195 2646 2840 HBL1_DMSO_200M_050219_2,2843 HBL1_DMSO_200M_050219_2,2843,YLCLDKSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2849 12.227 769.0 185290.0 25 0 34964.0 + 38073 TPHEATVG 8 133 406.2006732956551 810.3867936581102 2 406.2005493044853 MULTI CID FTMS 0 0 0 2848 81743.3671875 0.5351260727171778 -23 0.1714601516723632 1 Unmodified _TPHEATVG_ REV__ENST00000602009.5_1_19:16512885-16513104:-|nuORF 12.531546534597751 0.7257836412119636 4 VDAAEK 6 -1 43.356 0.0 0.0 5.3501 0.0 0.0 179.0701565504914 0.0 179.0701565504914 0.0 32.09741229724745 0.0 0.0 0 2.079689690656103 0.0 0.5994850021680094 0.2742275032520141 VDAAEK 5.3501 - 182 + 1 3.3 115453.6 1.0 196 2651 2848 HBL1_DMSO_200M_050219_2,2849 HBL1_DMSO_200M_050219_2,2849,TPHEATVG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2851 12.236 350.0 248610.0 25 0 38236.0 -1 IRAPTTMK 8 99 467.2628620965389 932.511171259878 2 467.2630493044853 MULTI CID FTMS 0 0 0 2850 271161.40625 0.7622588294326985 -10 0.0840654373168945 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 19.256988751693697 0.6264283240490721 4 T{M(Oxidation (M))|F}K 3 -1 36.44 0.0 0.0 3.9077 0.0 0.0 538.3221281463998 0.0 538.3221281463998 0.0 17.47343303901001 0.0 0.0 0 1.0 0.0 0.0 0.3252574989159953 T{M(Oxidation (M))|F}K 3.9077 + + 171 + 1 3.3 74933.0 1.0 197 2652 2850 HBL1_DMSO_200M_050219_2,2851 HBL1_DMSO_200M_050219_2,2851,IRAPTTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2854 12.245 135.0 418800.0 25 0 39127.0 36105 SVRSPTPYKK 10 82 388.2254160318034 1161.6544186956105 3 388.2254516482353 MULTI CID FTMS 0 0 0 2853 359580.15625 0.3219168144680766 43 -0.4537916183471679 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 15.248480904072842 0.5916873121453583 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 30.117 13.416 3.1256 2.5926 2.5926 45.238 0.0 0.0 0.0 0.0 19.544190852930825 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.25 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 2.5926 - 83 + 1 3.3 55156.3 1.0 198 2654 2853 HBL1_DMSO_200M_050219_2,2854 HBL1_DMSO_200M_050219_2,2854,SVRSPTPYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2858 12.27 800.0 197080.0 25 0 12606.0 + 13931 HYHPSKVAA 9 180 337.1780510021998 1008.5123236067996 3 337.1769592165947 MULTI CID FTMS 0 0 0 2857 82493.3046875 0.2614867371384392 -20 0.1322078704833984 1 Unmodified _HYHPSKVAA_ ENSG00000157456|ENST00000288207|CCNB2 20.453626601364224 0.2830276176381075 4 {[WN]|[YH]}H 3 6 18.952 0.0 0.0 1.8792 0.0 0.0 0.0 568.307342487912 568.307342487912 6.733937431123284 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 + {[WN]|[YH]}H 1.8792 + + 108 1 3.3 127049.5 0.9100000262260436 199 2657 2857 HBL1_DMSO_200M_050219_2,2858 HBL1_DMSO_200M_050219_2,2858,HYHPSKVAA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2859 12.284 800.0 202810.0 25 0 12833.0 + 39361 VAGPHQRHI 9 160 338.8569684554618 1013.5490759665854 3 338.8575622439384 MULTI CID FTMS 0 0 0 2857 87985.0625 0.5994885596630711 -16 0.1139869689941406 2 Unmodified _VAGPHQRHI_ ENSG00000105849|ENST00000222567|POLR1F 25.399314129420983 0.2080152500878129 4 VAGPH{I|L}T 7 4 51.276 0.0 0.0 5.059 0.0 0.0 0.0 335.1615084283813 335.1615084283813 26.59508008641264 0.0 0.0 0.0 0 0.2215141619232908 1.3979400086720375 0.0 0.0 VAGPH{I|L}T 5.059 - 708 + 1 3.3 130612.9 0.3700000047683716 200 2657 2857 HBL1_DMSO_200M_050219_2,2859 HBL1_DMSO_200M_050219_2,2859,VAGPHQRHI False False VAGPHQRHI 12.284306 338.857562243938 1038388.9375 2857.0 ENSG00000105849|ENST00000222567|POLR1F 4.9057230949401855 3.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2872 12.333 45.0 1347900.0 25 0 235600.0 + 36043 SVQHVDAAEK 10 85 361.8526375557972 1082.5360832675915 3 361.8524047732353 MULTI CID FTMS 0 0 0 2871 1102845.75 0.8095616882089072 19 -0.2427682876586914 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 37.07464296494664 0.1884581770199685 4 [VS]AGHVDAAEK 11 2 [VS]AG + + 39.787 25.027 7.9664 3.6753 3.6753 47.663 0.0 0.0 0.0 0.0 10.455962163802202 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.3252574989159953 [VS]AGHVDAAEK 3.6753 - 471 + 1 3.3 54580.5 1.0 201 2669 2871 HBL1_DMSO_200M_050219_2,2872 HBL1_DMSO_200M_050219_2,2872,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2873 12.346 704.0 190310.0 25 0 29448.0 + 4125 DAPAGRKV 8 123 407.2321311230636 812.4497093129272 2 407.2321044802666 MULTI CID FTMS 0 0 0 2871 119487.09375 0.6662301899692951 -8 0.0322751998901367 2 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 12.531546534597751 0.7257836412119636 4 {[DA]|[EG]}PA 4 4 40.445 0.0 0.0 4.9782 0.0 0.0 0.0 455.2724416807249 455.2724416807249 28.85151878060192 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[DA]|[EG]}PA 4.9782 + + 64 + 1 3.3 108625.2 1.0 202 2669 2871 HBL1_DMSO_200M_050219_2,2873 HBL1_DMSO_200M_050219_2,2873,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2875 12.352 150.0 447530.0 25 0 33428.0 + 36046 SVQHVDAAEK 10 84 542.2751392111567 1082.5357254891132 2 542.2754394412041 MULTI CID FTMS 0 0 0 2874 535775.375 0.9297803926281408 -5 0.0330476760864257 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 66.61675797227278 0.0192292371508206 4 [VS]QHVDAAEK 10 0 + 104.27 0.0 0.0 9.6318 9.6318 86.309 0.0 0.0 0.0 3.2262736931030105 3.2262736931030105 3.2262736931030105 3.2262736931030105 0 3.341129063296272 2.0 0.5 0.805462187404089 + + [VS]QHVDAAEK;[VS]AGHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]QHVD[DV]GK;{[QV]|[N{I|L}]|[RA]|[KV]}SHVDAAEK;[HV]QSVDAAEK;{[QV]|[N{I|L}]|[RA]|[KV]}HSVDAAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVD[DV]GK 9.6318;9.3338;8.7852;7.7614;6.9679;6.8535;5.7859;5.7253;5.6245;5.3955 +;-;-;-;-;-;-;-;-;- + 1338 + 1 3.3 54831.9 1.0 203 2670 2874 HBL1_DMSO_200M_050219_2,2875 HBL1_DMSO_200M_050219_2,2875,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2878 12.373 800.0 164770.0 25 0 17502.0 + 36137 SVTYWGADKK 10 140 385.5318081558932 1153.5735950678795 3 385.5313903689384 MULTI CID FTMS 0 0 0 2877 134435.203125 0.6274484508453123 -11 0.0600185394287109 1 Unmodified _SVTYWGADKK_ REV__ENSG00000120729|ENST00000239926|MYOT;REV__nc|ENSG00000120729|Q9UBF9-2|MYOT;REV__nc|ENSG00000120729|Q9UBF9|MYOT 14.838274106304384 0.5985701837916485 4 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 8 -1 44.103 0.0 0.0 3.8232 0.0 0.0 0.0 311.13769567817366 311.13769567817366 28.389539993749665 0.0 0.0 0.0 0 0.7887254899964358 2.0 0.2215141619232908 0.2396518287104437 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}VH 3.8232 - 831 1 3.3 109373.3 0.3899999856948852 204 2672 2877 HBL1_DMSO_200M_050219_2,2878 HBL1_DMSO_200M_050219_2,2878,SVTYWGADKK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2881 12.391 651.0 109920.0 25 0 8940.8 + 30445 RDSFSAEK 8 115 470.2302165760536 938.4458802189072 2 470.2306701540947 MULTI CID FTMS 0 0 0 2880 118789.5859375 0.3281424186637693 28 -0.3464574813842773 1 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 18.1463463914782 0.6428359029697936 4 HVDAAEK 7 -1 67.018 0.0 0.0 7.1414 0.0 0.0 170.06915396755636 0.0 170.06915396755636 0.0 35.8985760252164 0.0 0.0 0 2.504432191740108 0.0 0.3807196863200844 0.3252574989159953 HVDAAEK 7.1414 - 324 + 1 3.3 62012.2 1.0 205 2674 2880 HBL1_DMSO_200M_050219_2,2881 HBL1_DMSO_200M_050219_2,2881,RDSFSAEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2884 12.411 800.0 136540.0 25 0 9467.1 -1 MPDDHARKI 9 126 366.8506157682048 1097.5300179048145 3 366.8496581912041 MULTI CID FTMS 0 0 0 2883 90305.2109375 0.9119462930730196 -2 0.017923355102539 1 Oxidation (M) _M(Oxidation (M))PDDHARKI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 12.174745833636583 0.5071271664557081 4 HDDPE 5 -1 30.177 0.0 0.0 2.7496 0.0 0.0 486.3266645976129 0.0 486.3266645976129 0.0 19.581355631008268 0.0 0.0 0 0.0 0.0 0.0 0.0 HDDPE 2.7496 - 67 1 3.3 91760.6 0.4199999868869781 206 2676 2883 HBL1_DMSO_200M_050219_2,2884 HBL1_DMSO_200M_050219_2,2884,MPDDHARKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2885 12.425 800.0 42780.0 25 0 3636.7 -1 LSCPWNLSQG 10 78 581.2728125055191 1160.5310720778382 2 581.2724487185478 MULTI CID FTMS 0 0 0 2883 96971.4453125 1.0 0 0.0 2 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 12.240655878213236 0.6421556946785427 4 SAN 3 -1 31.995 0.0 0.0 2.7569 0.0 0.0 870.4091066010789 0.0 870.4091066010789 0.0 20.00508444608478 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 SAN 2.7569 - 55 + 1 3.3 33870.2 0.4300000071525574 207 2676 2883 HBL1_DMSO_200M_050219_2,2885 HBL1_DMSO_200M_050219_2,2885,LSCPWNLSQG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2887 12.431 107.0 428150.0 25 0 73978.0 28330 PSAALSTGK 9 65 416.2320884857456 830.4496240382912 2 416.2321044802666 MULTI CID FTMS 0 0 0 2886 554290.5625 0.8658202724576445 1 -0.019968032836914 1 Unmodified _PSAALSTGK_ ENSG00000143171|ENST00000359842|RXRG 15.847184025352805 0.4077185912009129 4 VVSPASSGK 9 5 + 61.195 0.0 0.0 7.3689 7.3689 94.315 0.0 0.0 0.0 34.23957328166548 9.23957328166548 9.23957328166548 22.21848749616356 0 0.805462187404089 2.0 0.0 0.2742275032520141 VVSPASSGK;VVSE{[NV]|[RG]}GK 7.3689;4.6934 -;- 97 + 1 3.3 41746.8 1.0 208 2677 2886 HBL1_DMSO_200M_050219_2,2887 HBL1_DMSO_200M_050219_2,2887,PSAALSTGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2888 12.445 800.0 98616.0 25 0 10938.0 + 19204 LEGEESRMSGE 11 87 620.2613952299112 1238.5082375266222 2 620.2616454958916 MULTI CID FTMS 0 0 0 2886 167085.5625 0.5834447010378666 12 -0.1503772735595703 2 Oxidation (M) _LEGEESRM(Oxidation (M))SGE_ CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__Q7Z794;ENSG00000167768|ENST00000252244|KRT1;ENSG00000189182|ENST00000341809|KRT77 85.76441949171179 0.0033696626484081 4 {I|L}EGEES 6 5 81.988 0.0 0.0 6.6199 0.0 0.0 0.0 591.2201021783811 591.2201021783811 52.65608173338599 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.4604093769761874 0.0 + {I|L}EGEES 6.6199 + + 659 + 1 3.3 62899.5 0.6399999856948853 209 2677 2886 HBL1_DMSO_200M_050219_2,2888 HBL1_DMSO_200M_050219_2,2888,LEGEESRMSGE True False LEGEESRMSGE 12.444822 620.261645495892 3232893.5 2886.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253 9.250538190205893 2.0 True 11.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 2893 12.473 800.0 147050.0 25 0 5594.1 + 4297 DARHNVSRV 9 161 351.856496369662 1052.547659709186 3 351.8564025759697 MULTI CID FTMS 0 0 0 2892 58646.375 0.060232039918389 -12 0.1282596588134765 1 Unmodified _DARHNVSRV_ ENSG00000198876|ENST00000361264|DCAF12 24.95707706330732 0.2136420476055689 4 {[DA]|[EG]}RHNVVRS 9 2 + 45.652 0.0 0.0 4.3373 4.3373 74.675 0.0 0.0 0.0 29.225534297491294 5.444539621753535 5.444539621753535 5.708253071758868 0 1.5286596949921218 1.3010299956639813 0.0 0.3252574989159953 {[DA]|[EG]}RHNVVRS;{[DA]|[EG]}RHVNVRS;{[DA]|[EG]}RHGGVVRS;{[DA]|[EG]}RHVGGVRS;{[DA]|[EG]}RHV[KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};V[WY]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VRS;{[DA]|[EG]}RHV[{I|L}P]{M(Oxidation (M))|F}V 4.3373;3.795;3.4625;2.9201;1.8893;1.6192;1.2864 -;-;-;-;-;-;- 222 + 1 3.3 98031.6 0.3700000047683716 210 2681 2892 HBL1_DMSO_200M_050219_2,2893 HBL1_DMSO_200M_050219_2,2893,DARHNVSRV False True DARHNVSRV 12.473186 351.85640257597 10065110.25 2892.0 ENSG00000198876|ENST00000361264|DCAF12 7.1259528795878095 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2895 12.481 294.0 227850.0 25 0 38671.0 11950 GNAYSTAK 8 83 406.2006732956551 810.3867936581102 2 406.2006103396416 MULTI CID FTMS 0 0 0 2894 117092.5859375 0.766536757818006 8 -0.1322612762451172 1 Unmodified _GNAYSTAK_ ENSG00000134905|ENST00000257347|CARS2;ENST00000535398.5_1_13:111298395-111353838:-|nuORF 18.13498045792455 0.6430038125133779 4 VDAAEK 6 6 49.223 0.0 0.0 6.0741 0.0 0.0 179.0666165114289 0.0 179.0666165114289 0.0 36.73229630727363 0.0 0.0 0 2.079689690656103 0.0 0.5 0.2614393726401688 VDAAEK 6.0741 - 88 + 1 3.3 59548.7 1.0 211 2682 2894 HBL1_DMSO_200M_050219_2,2895 HBL1_DMSO_200M_050219_2,2895,GNAYSTAK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2898 12.502 800.0 93928.0 25 0 9312.5 -1 IRAPTTMK 8 114 467.2628620965389 932.511171259878 2 467.2630798220634 MULTI CID FTMS 0 0 0 2897 68291.6015625 0.1919737656881822 22 -0.3286647796630859 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 19.256988751693697 0.6264283240490721 4 KTT 3 -1 34.737 0.0 0.0 3.7251 0.0 0.0 63.99853824215092 535.3018892877561 599.3004275299071 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 1.3494850021680094 0.0 KTT 3.7251 - 99 + 1 3.3 62704.7 0.4199999868869781 212 2684 2897 HBL1_DMSO_200M_050219_2,2898 HBL1_DMSO_200M_050219_2,2898,IRAPTTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2899 12.514 709.0 140870.0 25 0 17650.0 + 16588 KDLQEVKH 8 106 498.7773717708311 995.540190608462 2 498.7774536013603 MULTI CID FTMS 0 0 0 2897 96428.96875 0.3477813228964159 -4 0.0323982238769531 2 Unmodified _KDLQEVKH_ REV__ENSG00000239900|ENST00000623063|ADSL;REV__nc|ENSG00000239900|P30566-2|ADSL 30.63653989081413 0.3996269429323407 4 DK{I|L}AS 5 -1 40.305 0.0 0.0 4.0486 0.0 0.0 0.0 478.2283724420532 478.2283724420532 5.6246936830415 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.4247425010840047 DK{I|L}AS 4.0486 - 123 + 1 3.3 80303.3 1.0 213 2684 2897 HBL1_DMSO_200M_050219_2,2899 HBL1_DMSO_200M_050219_2,2899,KDLQEVKH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2901 12.523 301.0 304190.0 25 0 17462.0 + 13932 HYHPSKVAA 9 108 337.1780510021998 1008.5123236067996 3 337.1779357790947 MULTI CID FTMS 0 0 0 2900 157028.234375 0.4977470693030763 8 -0.1385049819946289 1 Unmodified _HYHPSKVAA_ ENSG00000157456|ENST00000288207|CCNB2 25.399314129420983 0.2080152500878129 4 {[WN]|[YH]}H 3 6 23.416 0.0 0.0 2.3219 0.0 0.0 0.0 568.3083833155665 568.3083833155665 9.921525057367404 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 + {[WN]|[YH]}H 2.3219 + + 90 1 3.3 82371.4 1.0 214 2685 2900 HBL1_DMSO_200M_050219_2,2901 HBL1_DMSO_200M_050219_2,2901,HYHPSKVAA False True HYHPSKVAA 12.523207 337.177935779095 1742629.5 2900.0 ENSG00000157456|ENST00000288207|CCNB2 5.206691026687622 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2902 12.537 800.0 91091.0 25 0 12615.0 -1 0 31 1135.4662143116566 3403.37681353517 3 1135.803881824017 MULTI CID FTMS 0 0 0 2900 93848.2109375 0.6208038686873082 -4 0.056990623474121 2 4 D 1 -1 4.6041 0.0 0.0 0.13528 0.0 0.0 947.3236277421493 2337.989831310588 3285.313459052737 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.13528 - 1 + 1 3.3 56336.1 0.3300000131130218 215 2685 2900 HBL1_DMSO_200M_050219_2,2902 HBL1_DMSO_200M_050219_2,2902, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2905 12.557 800.0 97717.0 25 0 10257.0 + 11989 GPEGQRVPA 9 80 455.7406855899251 909.4668182466502 2 455.7407714724541 MULTI CID FTMS 0 0 0 2904 94564.640625 0.5168177590001494 -7 0.0883655548095703 1 Unmodified _GPEGQRVPA_ REV__ENST00000595973.2_1_19:18493140-18496906:+|nuORF 11.640296217721598 0.521594087909532 4 [VS]K{[NV]|[RG]}AEP 8 -1 42.95 0.0 0.0 4.7226 0.0 0.0 0.0 81.99461779267918 81.99461779267918 18.51342204748164 0.0 0.0 0.0 0 1.774227503252014 0.0 0.805462187404089 0.3252574989159953 [VS]K{[NV]|[RG]}AEP 4.7226 - 161 1 3.3 64946.8 0.4600000083446502 216 2687 2904 HBL1_DMSO_200M_050219_2,2905 HBL1_DMSO_200M_050219_2,2905,GPEGQRVPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2906 12.571 800.0 104070.0 25 0 10433.0 -1 0 31 851.8517674333133 3403.377963866853 4 852.1034423708916 MULTI CID FTMS 0 0 0 2904 83059.4453125 0.6537524693406979 -7 0.0883655548095703 2 4 Y 1 -1 6.9897 0.0 0.0 0.20538 0.0 0.0 582.2093832247932 2655.0901508766697 3237.299534101463 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.20538 - 4 + 1 3.3 70702.4 0.3600000143051147 217 2687 2904 HBL1_DMSO_200M_050219_2,2906 HBL1_DMSO_200M_050219_2,2906, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2909 12.592 800.0 86091.0 25 0 9483.7 + -1 RWKSFWHFFRM 11 86 548.6042434276841 1642.790900883252 3 548.6044189333916 MULTI CID FTMS 0 0 0 2908 116051.546875 0.7000440160757642 -2 0.0340919494628906 1 Oxidation (M) _RWKSFWHFFRM(Oxidation (M))_ REV__ENSG00000239713|ENST00000407997|APOBEC3G 0.0833504608790944 0.8747546825782322 4 QGPSRS[QA] 8 -1 43.906 0.0 0.0 2.6726 0.0 0.0 813.3607044904312 0.0 813.3607044904312 0.0 32.96388461952553 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.0 QGPSRS[QA] 2.6726 - 241 1 3.3 59057.1 0.4300000071525574 218 2689 2908 HBL1_DMSO_200M_050219_2,2909 HBL1_DMSO_200M_050219_2,2909,RWKSFWHFFRM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2910 12.605 800.0 103250.0 25 0 10435.0 + 34860 SQGFSHSQM 9 116 512.7108878163363 1023.4072226994724 2 512.7109863162041 MULTI CID FTMS 0 0 0 2908 84925.53125 0.011142338930577 -22 0.2545967102050781 2 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 93.16586880292088 0.0136995152735431 4 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}QS 9 4 + 65.517 0.0 0.0 6.4019 6.4019 81.117 0.0 0.0 0.0 14.34755818555452 45.99320889783044 14.34755818555452 4.119543704721593 0 1.2614393726401687 1.0969100130080565 0.6861818737241735 0.6989700043360187 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}QS;{[QS]|[NT]}G[MN]SWQS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QT{[CA]|SS}S;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}QS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}[AG]S;{[QS]|[NT]}G[MN]SW[AG]S;{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}QS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};[AG]SG{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}QS;{[QS]|[NT]}{[WN]|[YH]}QT{[CA]|SS}S 6.4019;5.9993;5.9683;5.5021;5.5021;5.0996;5.0554;5.0354;4.6387;4.6165 -;-;-;-;-;-;-;-;-;- 753 1 3.3 69663.5 0.4000000059604645 219 2689 2908 HBL1_DMSO_200M_050219_2,2910 HBL1_DMSO_200M_050219_2,2910,SQGFSHSQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2912 12.617 406.0 255680.0 25 0 30928.0 + 36044 SVQHVDAAEK 10 138 361.8526375557972 1082.5360832675915 3 361.8523132205009 MULTI CID FTMS 0 0 0 2911 176432.703125 0.1295132678320027 40 -0.4443893432617187 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 4 HVDAAEK 7 3 32.968 0.0 0.0 3.0454 0.0 0.0 314.15948070910764 0.0 314.15948070910764 0.0 3.0026697949782744 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3252574989159953 + HVDAAEK 3.0454 + + 678 + 1 3.3 89187.2 1.0 220 2690 2911 HBL1_DMSO_200M_050219_2,2912 HBL1_DMSO_200M_050219_2,2912,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2913 12.63 800.0 143960.0 25 0 27541.0 + 4299 DARHNVSRV 9 92 527.280880991637 1052.547209050074 2 527.2811767458916 MULTI CID FTMS 0 0 0 2911 110505.8984375 0.8521870559189588 -5 0.0916242599487304 2 Unmodified _DARHNVSRV_ ENSG00000198876|ENST00000361264|DCAF12 23.80106514851385 0.2283505500606397 4 VDQVH 5 8 42.365 0.0 0.0 4.025 0.0 0.0 0.0 471.2213228815063 471.2213228815063 29.2659970366416 0.0 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.3807196863200844 VDQVH 4.025 - 164 + 1 3.3 93496.9 0.449999988079071 221 2690 2911 HBL1_DMSO_200M_050219_2,2913 HBL1_DMSO_200M_050219_2,2913,DARHNVSRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2914 12.644 800.0 67919.0 25 0 4197.0 + 36047 SVQHVDAAEK 10 83 542.2751392111567 1082.5357254891132 2 542.2744018435478 MULTI CID FTMS 0 0 0 2911 86166.2421875 0.1495322223280329 15 -0.1833915710449218 3 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 4 [VS]QHVDAAEK 10 0 + 105.13 0.0 0.0 9.7114 9.7114 92.927 0.0 0.0 0.0 83.98570980063916 15.651668842475033 15.651668842475033 9.164539485499247 0 2.7416440611282624 2.0 0.8494850021680094 0.7614393726401688 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAA[VS];[VS]QHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]AGHVD{[NV]|[RG]}[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAA[VS];[VS]QHVD[DV]GK;[VS]QHVD{[NV]|[RG]}[VS];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AWVHGA[PA] 9.7114;8.8648;7.3765;6.721;5.604;5.1238;5.0073;4.9518;4.4716;4.1517 +;-;-;-;-;-;-;-;-;- + 667 + 1 3.3 46170.9 0.4000000059604645 222 2690 2911 HBL1_DMSO_200M_050219_2,2914 HBL1_DMSO_200M_050219_2,2914,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2918 12.669 800.0 115970.0 25 0 5652.1 + 6612 EAREEKTRI 9 113 377.87588457297016 1130.6058243191103 3 377.8748046755791 MULTI CID FTMS 0 0 0 2917 65043.734375 0.5994589776304459 -3 0.0468807220458984 1 Unmodified _EAREEKTRI_ ENSG00000134597|ENST00000305536|RBMX2 46.4752305370441 0.0480981420502832 4 E{I|L}NEEKTR{I|L} 9 2 + 44.063 0.0 0.0 3.8973 3.8973 82.361 0.0 0.0 0.0 29.459406196379447 3.480137174129325 3.480137174129325 44.06349996614132 0 1.274227503252014 0.0 0.5 0.0 E{I|L}NEEKTR{I|L} 3.8973 - 115 + 1 3.3 75079.3 0.4000000059604645 223 2693 2917 HBL1_DMSO_200M_050219_2,2918 HBL1_DMSO_200M_050219_2,2918,EAREEKTRI True True EAREEKTRI 12.668687 377.874804675579 446383.90625 2917.0 ENSG00000134597|ENST00000305536|RBMX2 3.9948693911234536 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2921 12.689 800.0 159280.0 25 0 24780.0 36106 SVRSPTPYKK 10 129 388.2254062983613 1161.6543894952838 3 388.2260925173759 MULTI CID FTMS 0 0 0 2920 68618.984375 0.1063720661068305 -18 0.2479782104492187 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 15.248480904072842 0.5916873121453583 4 P{I|L} 2 9 19.024 0.0 0.0 1.6376 0.0 0.0 429.234819850155 519.2596839702687 948.4945038204236 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 P{I|L} 1.6376 - 135 + 1 3.3 103680.7 0.3899999856948852 224 2695 2920 HBL1_DMSO_200M_050219_2,2921 HBL1_DMSO_200M_050219_2,2921,SVRSPTPYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2926 12.714 609.0 129040.0 25 0 43160.0 + 39142 TYLGNKRCFSN 11 64 434.8821624059175 0 434.8819152712822 PEAK CID FTMS 0 0 0 2925 131743.375 0.6946198770958585 -161 1.2025785446166992 1 Unmodified _TYLGNKRCFSN_ REV__ENSG00000069188|ENST00000392650|SDK2;REV__nc|ENSG00000069188|Q58EX2-3|SDK2;REV__nc|ENSG00000069188|Q58EX2-4|SDK2 2.9952420565917617 0.4761840153648598 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.3 67078.1 1.0 225 2699 2925 HBL1_DMSO_200M_050219_2,2926 HBL1_DMSO_200M_050219_2,2926,TYLGNKRCFSN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2928 12.719 100.0 599300.0 25 0 38508.0 + 4298 DARHNVSRV 9 85 351.856496369662 1052.547659709186 3 351.8563110232353 MULTI CID FTMS 0 0 0 2927 544071.375 0.558781830547119 7 -0.1034517288208007 1 Unmodified _DARHNVSRV_ ENSG00000198876|ENST00000361264|DCAF12 27.088373467376528 0.1865245257266215 4 VDQHNVV 7 5 50.393 0.0 0.0 4.7878 0.0 0.0 0.0 258.1219271295532 258.1219271295532 44.424260384580805 0.0 0.0 0.0 0 1.242992819099939 0.0 0.0 0.7742275032520141 VDQHNVV 4.7878 - 154 + 1 3.3 55982.2 1.0 226 2700 2927 HBL1_DMSO_200M_050219_2,2928 HBL1_DMSO_200M_050219_2,2928,DARHNVSRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2931 12.74 800.0 81749.0 25 0 7374.5 + 33413 SHELSQDDPH 10 82 582.7492583889057 1163.4839638446113 2 582.7491332888603 MULTI CID FTMS 0 0 0 2930 84989.6015625 0.6435338233780431 -4 0.0260334014892578 1 Unmodified _SHELSQDDPH_ REV__ENST00000382751.3_1_21:33687168-33687225:-|nuORF 20.41453444215458 0.5050059513928961 4 EQSEH 5 -1 53.443 0.0 0.0 4.5934 0.0 0.0 535.239982851045 0.0 535.239982851045 0.0 31.00325315531208 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 EQSEH 4.5934 - 174 1 3.3 57375.5 0.4399999976158142 227 2702 2930 HBL1_DMSO_200M_050219_2,2931 HBL1_DMSO_200M_050219_2,2931,SHELSQDDPH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2932 12.753 800.0 71309.0 25 0 7296.5 + 6241 DTNADKQLS 9 106 496.238323074309 990.462093215418 2 496.2385742068291 MULTI CID FTMS 0 0 0 2930 114245.328125 0.4444022566492729 -20 0.2500133514404297 2 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 74.19965305603844 0.0194755241623067 4 {[MS]|[{M(Oxidation (M))|F}A]}C{I|L}N[HS]{I|L}S 9 7 + 40.152 0.0 0.0 4.0538 4.0538 68.523 0.0 0.0 0.0 11.196414118408152 7.320067506225058 7.320067506225058 2.356715164544589 0 0.0 0.0 1.0021934810768762 0.6307196863200843 {[MS]|[{M(Oxidation (M))|F}A]}C{I|L}N[HS]{I|L}S;{[ES]|[DT]|[{I|L}C]}NAD[KQ]{[TV]|[{I|L}S]};{[QD]|[EN]|[WG]|[KD]|[RS]}QAN{I|L}C{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}CN{I|L}[HS]{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}QA{I|L}NC{[TV]|[{I|L}S]};{[ES]|[DT]|[{I|L}C]}GGAD[KQ]{[TV]|[{I|L}S]};{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]AN{I|L}C{[TV]|[{I|L}S]};{[QD]|[EN]|[WG]|[KD]|[RS]}QAGG{I|L}C{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}C{I|L}GG[HS]{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}ANC{[TV]|[{I|L}S]} 4.0538;3.8159;3.6858;3.3996;3.0317;2.8862;2.7562;2.7562;2.4873;2.4238 -;+;-;-;-;-;-;-;-;- + 487 + 1 3.3 51619.2 0.4900000095367431 228 2702 2930 HBL1_DMSO_200M_050219_2,2932 HBL1_DMSO_200M_050219_2,2932,DTNADKQLS True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2934 12.771 800.0 60734.0 25 0 9061.2 5258 DKLHLEKN 8 82 498.7773717708311 995.540190608462 2 498.7774230837822 MULTI CID FTMS 0 0 0 2933 68680.078125 0.2477020000998579 15 -0.1830863952636718 1 Unmodified _DKLHLEKN_ ENSG00000188158|ENST00000676302|NHS;nc|ENSG00000188158|Q6T4R5-2|NHS;nc|ENSG00000188158|Q6T4R5-3|NHS;nc|ENSG00000188158|Q6T4R5-4|NHS 12.240655878213236 0.7300809844188293 4 DK{I|L}AW 5 5 30.177 0.0 0.0 3.0312 0.0 0.0 0.0 379.2098787897094 379.2098787897094 15.624693683041498 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DK{I|L}AW 3.0312 - 52 + 1 3.3 40749.1 0.4199999868869781 229 2703 2933 HBL1_DMSO_200M_050219_2,2934 HBL1_DMSO_200M_050219_2,2934,DKLHLEKN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2935 12.785 800.0 47278.0 25 0 2679.6 -1 DMYECSCP 8 86 539.1673181436443 1076.3200833540884 2 539.1665527224541 MULTI CID FTMS 0 0 0 2933 89528.78125 0.4423213292917584 -10 0.1010608673095703 2 2 Carbamidomethyl (C),Oxidation (M) _DM(Oxidation (M))YEC(Carbamidomethyl (C))SC(Carbamidomethyl (C))P_ ENSG00000156958|ENST00000560031|GALK2;ENST00000560119.5_1_15:49584731-49620353:+|nuORF;nc|ENSG00000156958|Q01415-2|GALK2 2.577480529830294 0.808687252328423 4 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 1.2538 0.0 0.0 911.2739845765478 0.0 911.2739845765478 0.0 3.160320172748799 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2538 + + 34 + 1 3.3 31488.0 0.4000000059604645 230 2703 2933 HBL1_DMSO_200M_050219_2,2935 HBL1_DMSO_200M_050219_2,2935,DMYECSCP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2938 12.805 800.0 130740.0 25 0 14346.0 + -1 MHSCYEGY 8 104 531.684804772664 1061.355056612128 2 531.6850463747978 MULTI CID FTMS 0 0 0 2937 103047.484375 0.5168480091046216 -14 0.1446161270141601 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))HSC(Carbamidomethyl (C))YEGY_ REV__ENSG00000160293|ENST00000371850|VAV2;REV__nc|ENSG00000160293|P52735-2|VAV2;REV__nc|ENSG00000160293|P52735-3|VAV2 5.760428011301431 0.7893668129297577 4 Q{M(Oxidation (M))|F} 2 -1 17.959 0.0 0.0 1.6921 0.0 0.0 768.2501860282206 0.0 768.2501860282206 0.0 8.226825097560422 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{M(Oxidation (M))|F} 1.6921 - 109 1 3.3 81844.0 0.5 231 2705 2937 HBL1_DMSO_200M_050219_2,2938 HBL1_DMSO_200M_050219_2,2938,MHSCYEGY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2939 12.814 489.0 287380.0 25 0 15581.0 + + -1 SQADVHRQV 9 170 347.181106366729 1038.521489700387 3 347.1809265017509 MULTI CID FTMS 0 0 0 2937 161439.53125 0.4897500287011141 -9 0.099618911743164 2 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))FPFC(Carbamidomethyl (C))KLVS_ nc|ENSG00000173039|Q04206-4|RELA;nc|ENSG00000173039|Q04206-2|RELA;nc|ENSG00000173039|Q04206-3|RELA;ENSG00000162924|ENST00000394479|REL;ENSG00000173039|ENST00000406246|RELA;ENST00000531484.5_1_11:65421851-65429483:-|nuORF;nc|ENSG00000162924|Q04864|REL 9.38312468134398 0.7673771031149565 4 {[QS]|[NT]}ADVH{I|L}[RN] 9 -1 {[QS]|[NT]} + + 28.57 14.351 6.6719 2.751 2.751 45.476 0.0 0.0 0.0 0.0 10.49574283280971 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[QS]|[NT]}ADVH{I|L}[RN] 2.751 - 359 + 1 3.3 118077.8 1.0 232 2705 2937 HBL1_DMSO_200M_050219_2,2939 HBL1_DMSO_200M_050219_2,2939,FPFCKLVS False False SQADVHRQV 12.813834 347.180926501751 1779892.75 2937.0 nc|ENSG00000173039|Q04206-4|RELA;;nc|ENSG00000173039|Q04206-2|RELA;;nc|ENSG00000173039|Q04206-3|RELA;;ENSG00000162924|ENST00000394479|REL;;ENSG00000173039|ENST00000406246|RELA;;ENST00000531484.5_1_11:65421851-65429483:-|nuORF;;nc|ENSG00000162924|Q04864|REL 6.364247957865397 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2942 12.834 800.0 74744.0 25 0 7469.2 30998 RLEGPNGPA 9 83 455.7406855899251 909.4668182466502 2 455.7410461306572 MULTI CID FTMS 0 0 0 2941 66677.859375 0.3644100123403245 13 -0.1266508102416992 1 Unmodified _RLEGPNGPA_ nc|ENSG00000020219|A6NM43|CCT8L1P 7.289230182591677 0.6602208344931196 4 PEA 3 7 29.495 0.0 0.0 3.2431 0.0 0.0 85.01624961263686 524.2949561272785 609.3112057399154 0.0 0.0 0.0 0.0 0 1.25 0.0 0.3807196863200844 0.0 PEA 3.2431 - 57 + 1 3.3 53345.7 0.5 233 2707 2941 HBL1_DMSO_200M_050219_2,2942 HBL1_DMSO_200M_050219_2,2942,RLEGPNGPA False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 2943 12.848 800.0 91210.0 25 0 6949.4 -1 QSMNMGSDF 9 120 524.6887276723596 1047.3629024115191 2 524.6888915896416 MULTI CID FTMS 0 0 0 2941 121924.609375 0.8795353299152867 -4 0.0644493103027343 2 2 Oxidation (M) _QSM(Oxidation (M))NM(Oxidation (M))GSDF_ ENSG00000198959|ENST00000361475|TGM2;ENST00000468262.5_1_20:36766485-36793648:-|nuORF;nc|ENSG00000198959|P21980-2|TGM2 15.847184025352805 0.4077185912009129 4 {[QS]|[NT]}G 3 -1 29.869 0.0 0.0 2.8518 0.0 0.0 0.0 772.2275624059129 772.2275624059129 12.878851766332373 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.2302046884880938 0.6139829889124311 {[QS]|[NT]}G 2.8518 - 270 1 3.3 55977.8 0.5299999713897705 234 2707 2941 HBL1_DMSO_200M_050219_2,2943 HBL1_DMSO_200M_050219_2,2943,QSMNMGSDF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2944 12.862 800.0 65780.0 25 0 5053.0 + 36642 TATQTRTV 8 92 439.24049012445874 876.4664273157175 2 439.2406799197197 MULTI CID FTMS 0 0 0 2941 87929.8203125 1.0 0 0.0 3 Unmodified _TATQTRTV_ ENSG00000174231|ENST00000304992|PRPF8;ENST00000575116.1_1_17:1555319-1557183:-|nuORF;ENST00000576585.1_1_17:1556769-1557303:-|nuORF 29.081581746732265 0.4323690340403521 4 [TA]TQP 5 4 48.478 0.0 0.0 5.531 0.0 0.0 0.0 375.1933992975219 375.1933992975219 33.032234767408575 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5 0.4247425010840047 [TA]TQP 5.531 - 103 + 1 3.3 47338.0 0.4600000083446502 235 2707 2941 HBL1_DMSO_200M_050219_2,2944 HBL1_DMSO_200M_050219_2,2944,TATQTRTV False True TATQTRTV 12.861836 439.24067991972 584967.0625 2941.0 ENST00000576585.1_1_17:1556769-1557303:-|nuORF;;ENSG00000174231|ENST00000304992|PRPF8;;ENST00000575116.1_1_17:1555319-1557183:-|nuORF 3.986996650695801 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2946 12.867 9.5 4145200.0 25 0 525060.0 + 34861 SQGFSHSQM 9 74 512.7108878163363 1023.4072226994724 2 512.7115966677666 MULTI CID FTMS 0 0 0 2945 6325742.0 0.8299454865215935 -3 0.0729990005493164 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 53.40400417844725 0.0329064971918313 4 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 60.569 0.0 0.0 5.9183 5.9183 80.538 0.0 0.0 0.0 5.0565842292838425 5.0565842292838425 5.0565842292838425 5.0565842292838425 0 1.242992819099939 1.2218487496163564 0.6549471895720985 0.6237125054200234 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HSQ{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHS[AG]{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHS[TA]C;{[QS]|[NT]}[YQ]HS[AG]{M(Oxidation (M))|F} 5.9183;5.4242;5.0186;5.0174;4.4067;4.1123;4.1095;3.5933;3.3184;3.0867 -;+;-;-;-;-;-;-;-;- + 135 1 3.3 37740.4 1.0 236 2708 2945 HBL1_DMSO_200M_050219_2,2946 HBL1_DMSO_200M_050219_2,2946,SQGFSHSQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2947 12.881 800.0 141250.0 25 0 10331.0 -1 QSDFMQGAM 9 130 523.7017057015579 1045.3888584699157 2 523.7024413943291 MULTI CID FTMS 0 0 0 2945 110962.984375 0.6296360493258856 -16 0.2135610580444336 2 2 Oxidation (M) _QSDFM(Oxidation (M))QGAM(Oxidation (M))_ ENSG00000198914|ENST00000361360|POU3F3 29.081581746732265 0.1611639662936252 4 {[QS]|[NT]}G{M(Oxidation (M))|F}SH{M(Oxidation (M))|F}GD 9 -1 45.791 0.0 0.0 4.3803 0.0 0.0 0.0 80.01477991275624 80.01477991275624 15.34571990971309 0.0 0.0 0.0 0 1.0 1.0969100130080565 1.024227503252014 0.0 {[QS]|[NT]}G{M(Oxidation (M))|F}SH{M(Oxidation (M))|F}GD 4.3803 - 890 + 1 3.3 86186.3 0.9900000095367432 237 2708 2945 HBL1_DMSO_200M_050219_2,2947 HBL1_DMSO_200M_050219_2,2947,QSDFMQGAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2948 12.895 800.0 48703.0 25 0 13340.0 -1 0 21 1129.4465277938782 3385.317753981835 3 1130.115893542767 MULTI CID FTMS 0 0 0 2945 90805.046875 0.40386063246208 -16 0.2135610580444336 3 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20647 0.0 0.0 2000.6869689249968 1234.5438075764162 3235.2307765014134 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20647 - 1 + 1 3.3 42267.7 0.3199999928474426 238 2708 2945 HBL1_DMSO_200M_050219_2,2948 HBL1_DMSO_200M_050219_2,2948, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2950 12.899 53.0 1015000.0 25 0 160010.0 + 36048 SVQHVDAAEK 10 90 361.852671763849 1082.536185891747 3 361.8523437380791 MULTI CID FTMS 0 0 0 2949 1052528.0 1.0 0 0.0 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 37.77132515983256 0.1811013699114492 4 [VS]AGHVDAAEK 11 2 [VS]AG + + 52.815 29.174 9.2863 4.8788 4.8788 51.969 0.0 0.0 0.0 0.0 18.719326000369136 0.0 0.0 0 0.5629529932484498 0.0 0.4247425010840047 0.3252574989159953 [VS]AGHVDAAEK 4.8788 - 435 + 1 3.3 47771.3 1.0 239 2709 2949 HBL1_DMSO_200M_050219_2,2950 HBL1_DMSO_200M_050219_2,2950,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2951 12.904 249.0 241060.0 25 0 17641.0 + 36050 SVQHVDAAEK 10 79 542.2749493003311 1082.535345667462 2 542.2751342654228 MULTI CID FTMS 0 0 0 2949 293339.90625 0.7849406654179811 1 -0.0094413757324218 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 66.61675797227278 0.0192292371508206 4 [VS]QHVDAAEK 10 0 + 113.74 0.0 0.0 10.507 10.507 92.114 0.0 0.0 0.0 7.939676743181778 7.939676743181778 7.939676743181778 7.939676743181778 0 3.416386562212267 2.0 0.5 0.7742275032520141 + + [VS]QHVDAAEK;[VS]AGHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVD[DV]GK;[VS]QHVD[DV]GK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[VS]AG{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[HQ]VSVDAAEK;[HV]QSVDAAEK;[VS][AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK 10.507;9.7733;9.6601;8.1314;7.2706;6.7974;6.2691;6.2071;6.0181;5.9468 +;-;-;-;-;-;-;-;-;- + 1121 + 1 3.3 49721.7 1.0 240 2709 2949 HBL1_DMSO_200M_050219_2,2951 HBL1_DMSO_200M_050219_2,2951,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 2958 12.929 85.0 573220.0 25 0 62747.0 36107 SVRSPTPYKK 10 65 388.2254062983613 1161.6543894952838 3 388.2253906130791 MULTI CID FTMS 0 0 0 2957 579110.1875 0.8977274687022653 2 -0.0086126327514648 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 15.248480904072842 0.5916873121453583 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 36.948 11.242 2.619 3.1807 3.1807 46.322 0.0 0.0 0.0 0.0 26.463819087290403 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 3.1807 - 99 + 1 3.3 49436.5 1.0 241 2715 2957 HBL1_DMSO_200M_050219_2,2958 HBL1_DMSO_200M_050219_2,2958,SVRSPTPYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2968 12.977 800.0 30305.0 25 0 2301.7 + -1 WTMNPCHIRN 10 45 672.8027710894098 0 672.8029662966728 PEAK CID FTMS 0 0 0 2967 21968.720703125 0.3416150492563515 1 -0.0163774490356445 1 Carbamidomethyl (C),Oxidation (M) _WTM(Oxidation (M))NPC(Carbamidomethyl (C))HIRN_ REV__ENSG00000116748|ENST00000520113|AMPD1;REV__nc|ENSG00000116748|P23109-2|AMPD1 1.4819007175156935 0.3961065659209837 4 {I|L} 1 -1 6.9897 0.0 0.0 0.52023 0.0 0.0 942.3517447161258 285.1323336236938 1227.4840783398197 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.52023 + + 14 + 1 3.3 31092.9 0.3899999856948852 242 2724 2967 HBL1_DMSO_200M_050219_2,2968 HBL1_DMSO_200M_050219_2,2968,WTMNPCHIRN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2972 13.001 800.0 123720.0 25 0 40694.0 + 23197 LSSFDDMLYVL 11 72 434.8821624059175 0 434.8820678591728 PEAK CID FTMS 0 0 0 2971 115913.953125 0.6111588979209209 -133 1.1790237426757812 1 Unmodified _LSSFDDMLYVL_ REV__ENSG00000163359|ENST00000295550|COL6A3;REV__nc|ENSG00000163359|P12111-2|COL6A3;REV__nc|ENSG00000163359|P12111-3|COL6A3;REV__nc|ENSG00000163359|P12111-5|COL6A3 2.9952420565917617 0.4761840153648598 4 H 1 -1 0.088644 0.0 0.0 0.010215 0.0 0.0 519.735563970235 207.92371545963127 727.6592794298663 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.010215 - 1 + 1 3.3 86500.4 0.6299999952316284 243 2727 2971 HBL1_DMSO_200M_050219_2,2972 HBL1_DMSO_200M_050219_2,2972,LSSFDDMLYVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2973 13.01 525.0 174930.0 25 0 24795.0 42836 VVLDNSGK 8 101 416.2320990290547 830.4496451249095 2 416.2319518923759 MULTI CID FTMS 0 0 0 2971 160350.109375 0.4522741054917701 -14 0.0686721801757812 2 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 23.1484247019978 0.5573009939494978 4 VVSPASS[KG] 9 4 + 56.123 0.0 0.0 6.7581 6.7581 90.805 0.0 0.0 0.0 33.56471773145893 6.417002536801313 6.417002536801313 12.67606240177031 0 0.75 2.0 0.4247425010840047 0.3494850021680094 VVSPASS[KG];VVSE{[NV]|[RG]}[KG];[PS]ASG[KS]VV;[VS][QT][QA]VV;[PS]AGS[KS]VV 6.7581;5.2317;1.2318;0.898;0.55447 -;-;-;-;- 161 + 1 3.3 77499.3 1.0 244 2727 2971 HBL1_DMSO_200M_050219_2,2973 HBL1_DMSO_200M_050219_2,2973,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2975 13.022 458.0 121400.0 25 0 12258.0 + 6242 DTNADKQLS 9 105 496.238323074309 990.462093215418 2 496.2383300662041 MULTI CID FTMS 0 0 0 2974 172314.921875 0.6702868414173341 6 -0.0682220458984375 1 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 104.48436234954404 0.008620177265826 4 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S 9 0 + 80.517 0.0 0.0 8.1293 8.1293 90.549 0.0 0.0 0.0 3.748162098248997 51.40978057358331 3.748162098248997 8.494850021680094 0 1.885151878060192 0.0 1.586696871556164 0.6747425010840047 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S;{[QS]|[NT]}DADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S;[AG]SDADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S;{[QG]|[NA]}DTDKQ{I|L}S;{[QS]|[NT]}DADK[AG]{I|L}S;[AG]SDADK[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S;[AG]GDTDKQ{I|L}S 8.1293;7.2716;7.1996;7.1627;6.9472;6.6366;6.3419;6.2374;6.0219;5.7461 +;-;-;-;-;-;-;-;-;- + 1333 1 3.3 48775.2 1.0 245 2728 2974 HBL1_DMSO_200M_050219_2,2975 HBL1_DMSO_200M_050219_2,2975,DTNADKQLS True True DTNADKQLS 13.022076 496.238330066204 15337692.0 2974.0 ENSG00000163220|ENST00000368738|S100A9 7.073012828826904 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2977 13.038 800.0 52323.0 25 0 2713.7 + -1 QSVMSCCCC 9 106 539.1673181436443 1076.3200833540884 2 539.1672851443291 MULTI CID FTMS 0 0 0 2976 74225.890625 0.3667166485538936 16 -0.144505500793457 1 2 Carbamidomethyl (C) _QSVMSC(Carbamidomethyl (C))C(Carbamidomethyl (C))CC_ REV__ENSG00000128250|ENST00000354373|RFPL1;REV__ENSG00000128276|ENST00000249007|RFPL3;REV__nc|ENSG00000128276|O75679-2|RFPL3 4.3292370932331545 0.7635526921153418 4 {M(Oxidation (M))|F} 1 -1 13.979 0.0 0.0 1.2988 0.0 0.0 911.2738319886572 0.0 911.2738319886572 0.0 2.4077451835888457 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2988 + + 31 + 1 3.3 35654.1 0.4300000071525574 246 2729 2976 HBL1_DMSO_200M_050219_2,2977 HBL1_DMSO_200M_050219_2,2977,QSVMSCCCC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2978 13.05 650.0 175310.0 25 0 34692.0 + 4126 DAPAGRKV 8 100 407.23201528379184 812.4494776343837 2 407.2318908572197 MULTI CID FTMS 0 0 0 2976 111720.9609375 0.6297376582448775 -16 0.1062660217285156 2 Unmodified _DAPAGRKV_ ENSG00000161016|ENST00000528957|RPL8;ENST00000529920.5_1_8:146015191-146016147:-|nuORF 16.942295170755138 0.6606234159769251 4 {[DA]|[EG]}PA 4 4 43.333 0.0 0.0 5.3336 0.0 0.0 0.0 455.2737569032593 455.2737569032593 29.83771747200825 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.0 0.0 + {[DA]|[EG]}PA 5.3336 + + 53 + 1 3.3 91076.3 1.0 247 2729 2976 HBL1_DMSO_200M_050219_2,2978 HBL1_DMSO_200M_050219_2,2978,DAPAGRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2980 13.066 800.0 134120.0 25 0 13358.0 + -1 MHSCYEGY 8 122 531.684804772664 1061.355056612128 2 531.6849243044853 MULTI CID FTMS 0 0 0 2979 97414.9140625 0.4885971229251653 11 -0.0563421249389648 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))HSC(Carbamidomethyl (C))YEGY_ REV__ENSG00000160293|ENST00000371850|VAV2;REV__nc|ENSG00000160293|P52735-2|VAV2;REV__nc|ENSG00000160293|P52735-3|VAV2 5.760428011301431 0.7893668129297577 4 Q{M(Oxidation (M))|F} 2 -1 21.013 0.0 0.0 1.9799 0.0 0.0 768.251225606818 0.0 768.251225606818 0.0 11.281446971601312 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 Q{M(Oxidation (M))|F} 1.9799 - 32 1 3.3 85428.1 0.4000000059604645 248 2730 2979 HBL1_DMSO_200M_050219_2,2980 HBL1_DMSO_200M_050219_2,2980,MHSCYEGY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2993 13.125 727.0 162810.0 25 0 15127.0 + 25879 NLHTAVNEEK 10 142 385.5316973271259 1153.573262581578 3 385.5316039919853 MULTI CID FTMS 0 0 0 2992 116306.421875 0.4635940393040419 -13 0.088113784790039 1 Unmodified _NLHTAVNEEK_ ENSG00000102010|ENST00000348343|BMX 13.90604991867851 0.6142120002215601 4 [VS]AQ{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK 11 9 + 53.422 0.0 0.0 4.631 4.631 78.053 0.0 0.0 0.0 19.006817731298305 19.22579340788692 19.006817731298305 7.95880017344075 0 0.3182503180159344 2.0 0.2059771852360797 0.0 [VS]AQ{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK;[VS]AQ{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;[VS]A[AG]{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK;[VS]AG{M(Oxidation (M))|F}AAAE{M(Oxidation (M))|F}GK;[VS]AQ{M(Oxidation (M))|F}AA[Y{I|L}]GK;[VS]A[AG]{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;[VS]AG{M(Oxidation (M))|F}AAV[{M(Oxidation (M))|F}T]GK;[VS]A[AG]{M(Oxidation (M))|F}AA[Y{I|L}]GK;[WK]HVA{M(Oxidation (M))|F}QAAP;[VS]AG{M(Oxidation (M))|F}AAA[Y{I|L}]GK 4.631;3.9411;3.8397;3.5749;3.5275;3.1498;2.885;2.7362;2.5524;2.4714 -;-;-;-;-;-;-;-;-;- 890 1 3.311 99116.5 1.0 249 2742 2992 HBL1_DMSO_200M_050219_2,2993 HBL1_DMSO_200M_050219_2,2993,NLHTAVNEEK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2994 13.139 800.0 113470.0 25 0 5931.3 + 36138 SVTYWGADKK 10 111 577.7935838802108 1153.5726148272215 2 577.7939330935478 MULTI CID FTMS 0 0 0 2992 107829.4453125 0.3425078843843331 -9 0.0359411239624023 2 Unmodified _SVTYWGADKK_ REV__ENSG00000120729|ENST00000239926|MYOT;REV__nc|ENSG00000120729|Q9UBF9-2|MYOT;REV__nc|ENSG00000120729|Q9UBF9|MYOT 30.63653989081413 0.2803493085145199 4 [VS]QHVDAAAEK 11 -1 + 110.62 0.0 0.0 9.5892 9.5892 92.679 0.0 0.0 0.0 80.86903768191485 17.077421818143975 17.077421818143975 9.128498242810991 0 2.9049471895720984 2.0 0.805462187404089 0.7887254899964358 [VS]QHVDAAAEK;[VS][AG]HVDAAAEK;[VS]AGHVWAAAW;[VS]AGHVDAAAA[VS];[VS]QHVD{[NV]|[RG]}EK;[VS]QHVWAAAW;[VS]QHVDAAAA[VS];[VS][AG]HVD{[NV]|[RG]}EK;[VS]AGHVDA[DV]GK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AAEK 9.5892;8.7979;7.9364;7.8281;7.7455;7.3243;7.2103;6.951;6.401;6.2621 -;-;-;-;-;-;-;-;-;- 1406 + 1 3.311 72500.7 0.4699999988079071 250 2742 2992 HBL1_DMSO_200M_050219_2,2994 HBL1_DMSO_200M_050219_2,2994,SVTYWGADKK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 2996 13.144 25.0 1452800.0 25 0 169660.0 + 34862 SQGFSHSQM 9 70 512.7108878163363 1023.4072226994724 2 512.7115356326103 MULTI CID FTMS 0 0 0 2995 2184437.25 0.2866009768066958 32 -0.3460521697998047 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 51.41523569358685 0.0372669606867193 4 {[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F} 9 2 + 62.629 0.0 0.0 6.1197 6.1197 80.189 0.0 0.0 0.0 4.235162698957282 4.235162698957282 4.235162698957282 4.235162698957282 0 1.742992819099939 1.154901959985743 0.0 0.3807196863200844 {[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};[HS][YQ]QTN{M(Oxidation (M))|F};[HS][YQ][AG]TN{M(Oxidation (M))|F} 6.1197;5.7058;4.952;4.8061;4.0469;3.4557;3.3808;2.1372;1.2321 -;-;-;-;-;-;-;-;- 82 + 1 3.311 31900.6 1.0 251 2743 2995 HBL1_DMSO_200M_050219_2,2996 HBL1_DMSO_200M_050219_2,2996,SQGFSHSQM True False SQGFSHSQM 13.143988 512.71153563261 224883744.0 2995.0 ENSG00000181143|ENST00000397910|MUC16 11.24124558766683 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 2997 13.158 800.0 49552.0 25 0 12942.0 -1 0 34 1129.4465277938782 3385.317753981835 3 1129.782153308392 MULTI CID FTMS 0 0 0 2995 93467.6875 0.3876447114829743 19 -0.1781225204467773 2 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20647 0.0 0.0 1473.5034972453095 1761.722050782404 3235.2255480277136 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20647 - 10 + 1 3.311 42357.9 0.3899999856948852 252 2743 2995 HBL1_DMSO_200M_050219_2,2997 HBL1_DMSO_200M_050219_2,2997, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 2999 13.163 64.0 909510.0 25 0 162580.0 + 36049 SVQHVDAAEK 10 79 361.852671763849 1082.536185891747 3 361.8524047732353 MULTI CID FTMS 0 0 0 2998 691258.5625 0.6567602595845431 35 -0.3557710647583008 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 34.221707139014875 0.2185845369562963 4 [VS]AGHVDAAEK 11 2 [VS]AG + + 42.019 24.526 7.8067 3.8816 3.8816 48.284 0.0 0.0 0.0 0.0 10.804431888313816 0.0 0.0 0 0.3054621874040891 0.0 0.3494850021680094 0.3054621874040891 [VS]AGHVDAAEK 3.8816 - 364 + 1 3.311 55547.5 1.0 253 2744 2998 HBL1_DMSO_200M_050219_2,2999 HBL1_DMSO_200M_050219_2,2999,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3000 13.167 208.0 298130.0 25 0 26694.0 + 36051 SVQHVDAAEK 10 89 542.275114389698 1082.535675846196 2 542.2752563357353 MULTI CID FTMS 0 0 0 2998 331432.53125 0.8870751316058333 5 -0.0509166717529296 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 74.30644344067612 0.018797905238503 4 [VS]AGHVDAAEK 11 2 + 93.185 0.0 0.0 8.608 8.608 84.151 0.0 0.0 0.0 8.73767645865766 8.73767645865766 8.73767645865766 2.768576328577097 0 2.579689690656103 2.0 0.0 0.0 [VS]AGHVDAAEK;[VS]QHVDAAEK;[VS]AGHVD[DV]GK;[VS]AGHVDAAA[VS];[VS]QHVDAAA[VS];[VS]QHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[HQ]VSVDAAEK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK 8.608;8.3523;7.3873;7.2504;6.9913;6.7799;6.5531;6.1306;6.1165;6.1147 -;+;-;-;-;-;-;-;-;- + 1006 1 3.311 53257.1 1.0 254 2744 2998 HBL1_DMSO_200M_050219_2,3000 HBL1_DMSO_200M_050219_2,3000,SVQHVDAAEK True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3003 13.187 800.0 74602.0 25 0 12708.0 + 31379 RNVSTGDVN 9 108 481.238542915719 960.462532898238 2 481.2387878298759 MULTI CID FTMS 0 0 0 3002 86343.953125 0.579171062057415 -5 0.0644865036010742 1 Unmodified _RNVSTGDVN_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 28.49450938151212 0.1686335738423394 4 STGDVN 6 3 51.146 0.0 0.0 5.3252 0.0 0.0 369.2127247541032 0.0 369.2127247541032 0.0 43.655243229180414 0.0 0.0 0 1.0 0.0 0.0 0.0 + STGDVN 5.3252 + + 81 1 3.311 50759.4 0.449999988079071 255 2746 3002 HBL1_DMSO_200M_050219_2,3003 HBL1_DMSO_200M_050219_2,3003,RNVSTGDVN False True RNVSTGDVN 13.187019 481.238787829876 716923.375 3002.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 6.838463147481282 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 3004 13.201 800.0 143130.0 25 0 13015.0 + 44507 YPAVRLWNY 9 128 394.5413947782199 1180.6023549348597 3 394.5412170290947 MULTI CID FTMS 0 0 0 3002 86953.40625 0.7521289640886274 4 -0.0421562194824218 2 Unmodified _YPAVRLWNY_ REV__ENSG00000109111|ENST00000314616|SUPT6H 8.155526934196011 0.6299788542272896 4 YPE 3 -1 38.416 0.0 0.0 3.254 0.0 0.0 0.0 788.4195224155847 788.4195224155847 27.578919642578683 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 YPE 3.254 - 52 + 1 3.311 92777.0 0.4099999964237213 256 2746 3002 HBL1_DMSO_200M_050219_2,3004 HBL1_DMSO_200M_050219_2,3004,YPAVRLWNY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3009 13.227 688.0 181100.0 25 0 38572.0 36108 SVRSPTPYKK 10 133 388.2254062983613 1161.6543894952838 3 388.2263366580009 MULTI CID FTMS 0 0 0 3008 93155.2109375 0.1444077371050348 37 -0.3577499389648437 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 15.248480904072842 0.5916873121453583 4 P{I|L} 2 9 19.024 0.0 0.0 1.6376 0.0 0.0 429.2347026514836 519.2606607687399 948.4953634202234 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 P{I|L} 1.6376 - 83 + 1 3.311 102567.3 1.0 257 2750 3008 HBL1_DMSO_200M_050219_2,3009 HBL1_DMSO_200M_050219_2,3009,SVRSPTPYKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3017 13.259 215.0 252600.0 25 0 34969.0 42837 VVLDNSGK 8 74 416.2320990290547 830.4496451249095 2 416.2319518923759 MULTI CID FTMS 0 0 0 3016 239891.359375 0.6766234859422459 16 -0.2260684967041015 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 23.1484247019978 0.5573009939494978 4 VVSPASS[KG] 9 4 + 57.545 0.0 0.0 6.9294 6.9294 91.891 0.0 0.0 0.0 41.85850004969453 5.629005157155831 5.629005157155831 14.436974992327125 0 0.8494850021680094 2.0 0.4247425010840047 0.3252574989159953 VVSPASS[KG];VVSE{[NV]|[RG]}[KG] 6.9294;5.1909 -;- 116 + 1 3.326 49624.9 1.0 258 2757 3016 HBL1_DMSO_200M_050219_2,3017 HBL1_DMSO_200M_050219_2,3017,VVLDNSGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3020 13.27 227.0 166550.0 25 0 18010.0 -1 0 79 496.2383056172033 495.2310291506033 1 496.2385742068291 MULTI CID FTMS 0 0 0 3019 234686.953125 0.8326618987884353 -1 0.0040483474731445 1 4 {[ES]|[DT]|[{I|L}C]}NA 4 -1 21.242 0.0 0.0 4.2894 0.0 0.0 0.0 91.05326971140332 91.05326971140332 -0.6690156004425774 0.0 -0.6690156004425774 0.0 0 0.0 0.0 0.805462187404089 0.0 {[ES]|[DT]|[{I|L}C]}NA 4.2894 - 47 1 3.326 34168.0 1.0 259 2759 3019 HBL1_DMSO_200M_050219_2,3020 HBL1_DMSO_200M_050219_2,3020, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3021 13.284 800.0 65946.0 25 0 3299.6 -1 0 73 660.6194362254902 1978.8364792766704 3 660.9537841677666 MULTI CID FTMS 0 0 0 3019 71412.8984375 0.6100285225183344 -6 0.0280170440673828 2 4 [PS]{[HG]|PP}[C(Carbamidomethyl (C))N]GQSAPST[RD]QGSH 19 -1 [PS]{[HG]|PP}[C(Carbamidomethyl (C))N]GQSA + + 52.701 31.634 3.178 2.6632 2.6632 45.318 0.0 0.0 0.0 0.0 21.06716826712693 0.0 0.0 0 0.5 0.0 0.3807196863200844 1.6716386573933963 [PS]{[HG]|PP}[C(Carbamidomethyl (C))N]GQSAPST[RD]QGSH 2.6632 - 832 + 1 3.326 48342.4 0.3799999952316284 260 2759 3019 HBL1_DMSO_200M_050219_2,3021 HBL1_DMSO_200M_050219_2,3021, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3024 13.304 800.0 124080.0 25 0 12673.0 -1 0 113 520.1373072117555 519.1300307451554 1 521.1365844607353 MULTI CID FTMS 0 0 0 3023 119078.5234375 0.6870092759013169 25 -0.2662611007690429 1 4 E 1 -1 9.6777 0.0 0.0 1.8642 0.0 0.0 372.0759821385132 0.0 372.0759821385132 0.0 9.67771005386541 0.0 0.0 0 0.0 0.0 0.0 0.0 E 1.8642 - 8 + 1 3.326 78072.9 0.550000011920929 261 2761 3023 HBL1_DMSO_200M_050219_2,3024 HBL1_DMSO_200M_050219_2,3024, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3025 13.317 751.0 183650.0 25 0 39475.0 7451 EGPAGVRK 8 123 407.23201528379184 812.4494776343837 2 407.2315246462822 MULTI CID FTMS 0 0 0 3023 97814.5390625 0.5513513154078606 16 -0.2177295684814453 2 Unmodified _EGPAGVRK_ ENST00000523135.1_1_5:179680521-179691830:-|nuORF 12.531546534597751 0.7257836412119636 4 {[DA]|[EG]}PA 4 4 40.445 0.0 0.0 4.9782 0.0 0.0 0.0 455.2734342006957 455.2734342006957 25.84121882396211 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[DA]|[EG]}PA 4.9782 + + 55 + 1 3.326 113483.2 1.0 262 2761 3023 HBL1_DMSO_200M_050219_2,3025 HBL1_DMSO_200M_050219_2,3025,EGPAGVRK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3028 13.338 800.0 153950.0 25 0 14199.0 + 36390 SYQKARQSM 9 158 366.8508243210557 1097.5306435633672 3 366.8501159548759 MULTI CID FTMS 0 0 0 3027 93241.796875 0.3418136113356465 -5 0.0620059967041015 1 Unmodified _SYQKARQSM_ ENSG00000105656|ENST00000262809|ELL 33.4449034751529 0.1114409586740657 4 SYQKANRTM 9 3 + 73.045 0.0 0.0 6.6554 6.6554 88.145 0.0 0.0 0.0 59.065950501809326 8.429862658764264 8.429862658764264 9.208187539523747 0 0.2742275032520141 2.0 0.0 0.5 SYQKANRTM;SY[AG]KANRTM;SYQKAGGRTM;SYQKM[{I|L}P]TM;SYQKM[KQ]W;SY[AG]KAGGRTM;SY[AG]KM[{I|L}P]TM;SYQKAN{[HG]|PP}PP;SY[AG]KM[KQ]W;SYQKAN[{I|L}T]{[CA]|SS} 6.6554;5.8164;5.8164;5.4955;5.3428;4.9814;4.6566;4.5314;4.4989;4.4352 -;-;-;-;-;-;-;-;-;- 375 + 1 3.326 102903.5 0.449999988079071 263 2763 3027 HBL1_DMSO_200M_050219_2,3028 HBL1_DMSO_200M_050219_2,3028,SYQKARQSM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3029 13.351 800.0 119120.0 25 0 20976.0 + 13964 HYQTGSNHM 9 121 537.72476448509 1073.4349760369798 2 537.7254516482353 MULTI CID FTMS 0 0 0 3027 94497.28125 0.7055661648890702 -1 0.0038843154907226 2 Unmodified _HYQTGSNHM_ ENSG00000121073|ENST00000240333|SLC35B1;ENST00000435059.6_1_17:47781399-47785273:-|nuORF;ENST00000504260.5_1_17:47779261-47782716:-|nuORF;ENST00000513508.1_1_17:47781399-47782716:-|nuORF;nc|ENSG00000121073|P78383-2|SLC35B1 86.33184430468982 0.0159826143231117 4 HYQT[SG]NMH 9 2 + 68.972 0.0 0.0 6.4254 6.4254 87.303 0.0 0.0 0.0 45.160029106476784 10.959924024478129 10.959924024478129 9.208187539523747 0 1.9731975075880328 2.0 0.3054621874040891 1.0356668758921828 HYQT[SG]NMH;HY[AG]T[SG]NMH;HYQT[SG]GGMH;[HN]{[DS]|[MA]|[CV]|TT}[YG]NHM;H{[HG]|PP}P[MN]NMH;M{[CP]|[EA]}PT[SG]NMH;[HN][HM][PG]NHM;[HN]{[DS]|[MA]|[CV]|TT}[NG]YHM;[HM][{M(Oxidation (M))|F}E]TAAHM;[HM]{NN|[MP]|[D{I|L}]|[EV]}QYHM 6.4254;5.5676;5.283;2.6005;2.5268;2.5204;2.4812;1.9743;1.9079;1.8505 -;-;-;-;-;-;-;-;-;- 349 + 1 3.326 74101.6 0.4399999976158142 264 2763 3027 HBL1_DMSO_200M_050219_2,3029 HBL1_DMSO_200M_050219_2,3029,HYQTGSNHM True True HYQTGSNHM 13.351393 537.725451648235 641091.0 3027.0 ENST00000513508.1_1_17:47781399-47782716:-|nuORF;;ENSG00000121073|ENST00000240333|SLC35B1;;nc|ENSG00000121073|P78383-2|SLC35B1;;ENST00000504260.5_1_17:47779261-47782716:-|nuORF;;ENST00000435059.6_1_17:47781399-47785273:-|nuORF 6.7054727872212725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3030 13.365 800.0 133710.0 25 0 11288.0 + 3852 DAKKQIKQV 9 120 529.3217762042636 1056.6289994753272 2 529.3220703005791 MULTI CID FTMS 0 0 0 3027 86895.3359375 0.5777884338865505 -2 0.0332727432250976 3 Unmodified _DAKKQIKQV_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B 96.93554129104106 0.0121609977933358 4 {[QV]|[N{I|L}]|[RA]|[KV]}SKQ{I|L}KQV 9 2 + 85.698 0.0 0.0 8.1105 8.1105 78.352 0.0 0.0 0.0 0.0269751594335332 13.309739923580082 0.0269751594335332 0.0269751594335332 0 1.6861818737241734 1.0969100130080565 1.174742501084005 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}SKQ{I|L}KQV;{[DA]|[EG]}KKQ{I|L}KQV;{[QV]|[N{I|L}]|[RA]|[KV]}SKQ{I|L}K[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}SK[AG]{I|L}KQV;{[DA]|[EG]}KKQ{I|L}K[AG]V;{[DA]|[EG]}KK[AG]{I|L}KQV;DAKKQ{I|L}KVQ;[KA]DKQ{I|L}KQV;{[QV]|[N{I|L}]|[RA]|[KV]}SK[AG]{I|L}K[AG]V;{[DA]|[EG]}KK[AG]{I|L}K[AG]V 8.1105;8.1079;7.239;7.239;7.2365;7.2365;6.8508;6.406;6.3717;6.3691 -;+;-;-;-;-;-;-;-;- + 595 1 3.326 86979.7 0.4199999868869781 265 2763 3027 HBL1_DMSO_200M_050219_2,3030 HBL1_DMSO_200M_050219_2,3030,DAKKQIKQV True True DAKKQIKQV 13.365224 529.322070300579 536634.3125 3027.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 6.33466911315918 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3033 13.381 514.0 198270.0 25 0 22027.0 + 36391 SYQKARQSM 9 94 549.7713700930416 1097.528187252883 2 549.7715942263603 MULTI CID FTMS 0 0 0 3032 212907.6875 1.0 0 0.0 1 Unmodified _SYQKARQSM_ ENSG00000105656|ENST00000262809|ELL 62.86856922530385 0.024493861581232 4 SYQKANRTM 9 3 + 101.38 0.0 0.0 9.2371 9.2371 93.535 0.0 0.0 0.0 77.95039703980876 12.98332479720628 12.98332479720628 9.208187539523747 0 1.1237125054200234 2.0 0.3494850021680094 0.805462187404089 SYQKANRTM;SYQKAGGRTM;SY[AG]KANRTM;SYQKM[{I|L}P]TM;SY[AG]KAGGRTM;SYQK{[NV]|[RG]}QTM;SYQMK[{I|L}P]TM;SYNRAKQTM;SY[AG]KM[{I|L}P]TM;SYQK{[NV]|[RG]}AASM 9.2371;8.3982;8.3982;7.7136;7.5631;7.3266;7.165;7.1522;6.8746;6.7867 -;-;-;-;-;-;-;-;-;- 853 + 1 3.326 80529.1 1.0 266 2765 3032 HBL1_DMSO_200M_050219_2,3033 HBL1_DMSO_200M_050219_2,3033,SYQKARQSM True True SYQKARQSM 13.380889 549.77159422636 2385684.3125 3032.0 ENSG00000105656|ENST00000262809|ELL 8.184401988983154 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3034 13.395 800.0 48216.0 25 0 6040.6 -1 0 46 990.4246024549428 1978.8346519766856 2 990.9283325076104 MULTI CID FTMS 0 0 0 3032 92492.3671875 1.0 0 0.0 2 4 Q[SG]H 4 -1 19.693 0.0 0.0 0.99517 0.0 0.0 1551.6529635995355 0.0 1551.6529635995355 0.0 8.723637474483468 0.0 0.0 0 0.0 0.0 0.0 0.5 Q[SG]H 0.99517 - 37 + 1 3.326 35918.1 0.3700000047683716 267 2765 3032 HBL1_DMSO_200M_050219_2,3034 HBL1_DMSO_200M_050219_2,3034, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3035 13.409 800.0 74480.0 25 0 6590.2 + 33064 SEQPLTSQSQS 11 98 596.2780530235145 1190.541553113829 2 596.2783691287041 MULTI CID FTMS 0 0 0 3032 86001.875 0.5514875109438426 -3 0.0519523620605468 3 Unmodified _SEQPLTSQSQS_ REV__ENSG00000153820|ENST00000392056|SPHKAP;REV__nc|ENSG00000153820|Q2M3C7-2|SPHKAP 53.40400417844725 0.0987786977674846 4 SQ[PS]D[{I|L}P]TN 9 -1 61.435 0.0 0.0 5.1603 0.0 0.0 233.1033842230601 0.0 233.1033842230601 0.0 9.68617969400347 0.0 0.0 0 0.7887254899964358 0.0 1.674742501084005 0.7302046884880937 SQ[PS]D[{I|L}P]TN 5.1603 - 654 + 1 3.326 46903.1 0.4099999964237213 268 2765 3032 HBL1_DMSO_200M_050219_2,3035 HBL1_DMSO_200M_050219_2,3035,SEQPLTSQSQS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3036 13.42 627.0 119460.0 25 0 9423.9 + 45597 YVGTLLLYCV 10 129 381.8751803876705 1142.6037117632115 3 381.8751708865166 MULTI CID FTMS 0 0 0 3032 86551.9296875 0.8296272249811195 -1 0.0040521621704101 4 Unmodified _YVGTLLLYCV_ REV__ENSG00000187612|ENST00000344514|OR5W2 21.74664581756881 0.480091245866545 4 SKTPV 5 -1 29.65 0.0 0.0 2.595 0.0 0.0 612.2966175763687 0.0 612.2966175763687 0.0 12.175904147916611 0.0 0.0 0 0.0397644799392252 0.0 1.305462187404089 0.0 SKTPV 2.595 - 641 1 3.326 66767.2 1.0 269 2765 3032 HBL1_DMSO_200M_050219_2,3036 HBL1_DMSO_200M_050219_2,3036,YVGTLLLYCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3038 13.425 46.0 1437700.0 25 0 212050.0 + 35716 SVHEEVQEK 9 85 362.1805878200972 1083.5199340604916 3 362.1800414919853 MULTI CID FTMS 0 0 0 3037 1180820.875 0.914404805728713 -1 0.0502443313598632 1 Unmodified _SVHEEVQEK_ REV__ENSG00000141013|ENST00000268699|GAS8;REV__nc|ENSG00000141013|O95995-2|GAS8 34.40172386719151 0.1061884637610825 4 [VS]EHVDAAEK 10 -1 + 89.607 0.0 0.0 8.27 8.27 96.905 0.0 0.0 0.0 60.89082928666974 17.914230059397894 17.914230059397894 32.311675286346926 0 0.6109243748081782 2.0 0.8494850021680094 0.2887254899964357 [VS]EHVDAAEK;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{M(Oxidation (M))|F}AEK;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}TVDAAEK;{[CT]|[{M(Oxidation (M))|F}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{M(Oxidation (M))|F}AEK;[VS]E{M(Oxidation (M))|F}AA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VS];[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RD]{M(Oxidation (M))|F}W;{[YC]|[HE]}VQE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VS];[VS]A[{M(Oxidation (M))|F}E]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VS];{NN|[MP]|[D{I|L}]|[EV]}HQE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PA];{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}TC[RP]EK 8.27;5.2879;4.6741;2.9765;2.4499;2.3593;2.0254;1.999;1.9987;1.9003 -;-;-;-;-;-;-;-;-;- 433 + 1 3.347 62049.8 1.0 270 2766 3037 HBL1_DMSO_200M_050219_2,3038 HBL1_DMSO_200M_050219_2,3038,SVHEEVQEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3039 13.434 531.0 113300.0 25 0 11519.0 + 34863 SQGFSHSQM 9 96 512.7108878163363 1023.4072226994724 2 512.7112304568291 MULTI CID FTMS 0 0 0 3037 147991.859375 0.019416722296012 55 -0.2902250289916992 2 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 49.52724829834842 0.0414064571532091 4 {[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F} 9 0 + 55.116 0.0 0.0 5.3856 5.3856 78.838 0.0 0.0 0.0 5.702300473794892 5.702300473794892 5.702300473794892 5.642714304385628 0 1.3807196863200843 0.8239087409443188 0.3494850021680094 0.2742275032520141 + + {[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}HSSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHS[AG]{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};[AG]SG{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}HSS[AG]{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}[YQ]HSQ{M(Oxidation (M))|F} 5.3856;4.8342;4.8284;4.2465;4.2178;3.9286;3.8332;3.6665;3.5571;3.4308 +;-;-;-;-;-;-;-;-;- + 527 + 1 3.347 51072.6 1.0 271 2766 3037 HBL1_DMSO_200M_050219_2,3039 HBL1_DMSO_200M_050219_2,3039,SQGFSHSQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3041 13.439 79.0 837750.0 25 0 78078.0 + + 35717 SVQHVDAAEK 10 77 542.7671163881276 1083.5196798430552 2 542.7672607302666 MULTI CID FTMS 0 0 0 3040 867884.0625 1.0 0 0.0 1 Unmodified _SVHEEVQEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 38.17557092003332 0.0854718145212029 4 [VS]EHVDAAEK 10 -1 + 110.41 0.0 0.0 10.19 10.19 98.961 0.0 0.0 0.0 84.28070988419236 18.279550148593486 18.279550148593486 41.53720958383822 0 2.504432191740108 2.0 1.0 0.3252574989159953 [VS]EHVDAAEK;{[CT]|[{M(Oxidation (M))|F}G]}[{M(Oxidation (M))|F}T]VDAAEK;[HV]ESVDAAA[VS];{[YC]|[HE]}VSVDAAA[VS];[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{M(Oxidation (M))|F}E]AEK;{[YC]|[HE]}VSV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AW;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[{M(Oxidation (M))|F}E]EK;[HV]ED[VS]AAA[VS];[HV]ESVD{[NV]|[RG]}[VS];[HT][DV]VDAAA[VS] 10.19;6.3566;5.9245;5.6503;5.0655;4.0733;4.0284;3.7089;3.6365;3.5854 -;-;-;-;-;-;-;-;-;- 442 + 1 3.347 56223.2 1.0 272 2767 3040 HBL1_DMSO_200M_050219_2,3041 HBL1_DMSO_200M_050219_2,3041,SVHEEVQEK False False SVQHVDAAEK 13.438772 542.767260730267 0.0 3040.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 2.160360336303711 2.0 False 10.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3042 13.453 800.0 73020.0 25 0 5881.9 -1 CSPCSTTCTS 10 112 552.193142507526 1102.371732081852 2 552.1932250857353 MULTI CID FTMS 0 0 0 3040 86740.8671875 0.7132668562530519 -4 0.1127777099609375 2 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))SPC(Carbamidomethyl (C))STTCTS_ CON__Q6IFU5;ENSG00000204889|ENST00000377755|KRT40 6.723162845929126 0.6955379296933136 4 {M(Oxidation (M))|F}SSAN 5 -1 13.977 0.0 0.0 1.2679 0.0 0.0 357.1040451695456 236.06784998111564 593.1718951506613 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.3054621874040891 {M(Oxidation (M))|F}SSAN 1.2679 - 187 + 1 3.347 50005.8 0.4099999964237213 273 2767 3040 HBL1_DMSO_200M_050219_2,3042 HBL1_DMSO_200M_050219_2,3042,CSPCSTTCTS False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 3048 13.477 320.0 321530.0 25 0 19210.0 + + 22490 LPHEQRKV 8 122 336.19863175173987 1005.5740658554196 3 336.1982910037041 MULTI CID FTMS 0 0 0 3047 177744.46875 0.924294090671392 -16 0.221771240234375 1 Unmodified _LPVPEPELL_ ENSG00000103591|ENST00000261880|AAGAB;nc|ENSG00000103591|Q6PD74-2|AAGAB 11.494710602746466 0.5255349189887087 4 {I|L}PHE 4 -1 42.521 0.0 0.0 4.2285 0.0 0.0 0.0 526.3106705270199 526.3106705270199 30.53126590298256 0.0 0.0 0.0 0 0.2887254899964357 0.7695510786217261 0.0 0.0 {I|L}PHE 4.2285 - 81 + 1 3.347 83757.8 1.0 274 2772 3047 HBL1_DMSO_200M_050219_2,3048 HBL1_DMSO_200M_050219_2,3048,LPVPEPELL False False LPHEQRKV 13.477321 336.198291003704 1005526.0625 3047.0 ENSG00000103591|ENST00000261880|AAGAB;;nc|ENSG00000103591|Q6PD74-2|AAGAB 1.3019242535034816 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3053 13.506 800.0 76430.0 25 0 8024.3 + 25477 NEKWNANDGQ 10 93 588.2573723243921 1174.5001917155842 2 588.2576782107353 MULTI CID FTMS 0 0 0 3052 56768.1796875 0.6178551595344 1 -0.0163707733154296 1 Unmodified _NEKWNANDGQ_ REV__ENST00000342619.10_1_2:183943717-183943840:+|nuORF 8.745405648335112 0.6861838735306406 4 YHDEAQQ{[QG]|[NA]} 9 -1 42.625 0.0 0.0 3.6292 0.0 0.0 100.06414229560704 0.0 100.06414229560704 0.0 29.960762528683706 0.0 0.0 0 0.5 0.0 0.0 0.0 YHDEAQQ{[QG]|[NA]} 3.6292 - 630 1 3.347 50326.0 0.4300000071525574 275 2776 3052 HBL1_DMSO_200M_050219_2,3053 HBL1_DMSO_200M_050219_2,3053,NEKWNANDGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3058 13.534 800.0 53920.0 25 0 3905.2 -1 0 100 496.2383056172033 495.2310291506033 1 496.2383300662041 MULTI CID FTMS 0 0 0 3057 61631.83984375 0.2186678215673461 20 -0.1074361801147461 1 4 [YN]{I|L}S 4 -1 + 18.94 0.0 0.0 3.8245 3.8245 78.385 0.0 0.0 0.0 0.7133375178436552 7.442190502882156 0.7133375178436552 10.07129707683461 0 0.0 0.0 0.2742275032520141 0.0 [YN]{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}S;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[DS]|[MA]|[CV]|TT} 3.8245;1.7909;0.89594 -;-;- 43 + 1 3.347 36766.9 0.4099999964237213 276 2780 3057 HBL1_DMSO_200M_050219_2,3058 HBL1_DMSO_200M_050219_2,3058, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3065 13.571 800.0 138960.0 25 0 13113.0 + -1 SVRYSSSKH 9 146 364.8528226957976 1091.5366386875928 3 364.8524963259697 MULTI CID FTMS 0 0 0 3064 101584.9296875 0.4154373023394371 -23 0.2329883575439453 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SVRYSSSKH_ ENSG00000186395|ENST00000269576|KRT10;P13645 23.96415052054722 0.2262755354658572 4 EVRYSS[KS]H 9 -1 + 47.725 0.0 0.0 4.3723 4.3723 81.866 0.0 0.0 0.0 24.537881139012043 2.671430251549083 2.671430251549083 14.78566495593843 0 1.5044321917401078 0.0 0.3807196863200844 0.0 EVRYSS[KS]H;EVRYSE[RP]G;EVRYSS[HS]K;[RV]EY{[QN]|[E{I|L}]|[KN]}H{M(Oxidation (M))|F};[KA]{[QG]|[NA]}Y{[QN]|[E{I|L}]|[KN]}H{M(Oxidation (M))|F};[KA]{M(Oxidation (M))|F}[NS]{[QN]|[E{I|L}]|[KN]}H{M(Oxidation (M))|F};[AG][KQ]Y{[QN]|[E{I|L}]|[KN]}H{M(Oxidation (M))|F} 4.3723;3.0177;2.9265;2.5506;0.6679;0.33078;0.30847 -;-;-;-;-;-;- 263 + 1 3.347 91116.4 0.8899999856948853 277 2786 3064 HBL1_DMSO_200M_050219_2,3065 HBL1_DMSO_200M_050219_2,3065,SVRYSSSKH False False SVRYSSSKH 13.57055 364.85249632597 1290315.25 3064.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 -0.303130288918813 3.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3068 13.581 185.0 255740.0 25 0 46289.0 -1 LSCPWNLSQG 10 76 581.272813215927 1160.531073498654 2 581.2728759646416 MULTI CID FTMS 0 0 0 3067 312855.40625 0.7090482690121401 -23 0.2053546905517578 1 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 12.240655878213236 0.6421556946785427 4 {[DA]|[EG]}[{I|L}A]WWQSAN 10 -1 {[DA]|[EG]}[{I|L}A]WWQ + + 26.669 -0.31734 -0.036459 2.298 2.298 44.859 0.0 0.0 0.0 0.0 16.66386562212267 0.0 0.0 0 0.5 0.0 0.0 0.3252574989159953 {[DA]|[EG]}[{I|L}A]WWQSAN 2.298 - 107 + 1 3.347 39792.1 1.0 278 2788 3067 HBL1_DMSO_200M_050219_2,3068 HBL1_DMSO_200M_050219_2,3068,LSCPWNLSQG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3104 13.734 800.0 53069.0 25 0 5542.4 + 5531 DMEETYNDS 9 90 552.193142507526 1102.371732081852 2 552.1941406130791 MULTI CID FTMS 0 0 0 3103 71399.8671875 0.5871183959416599 52 -0.3458175659179687 1 Unmodified _DMEETYNDS_ REV__CXCR4|p.G17D|1|0.31|ENSG00000121966|chr2:136115878-136115878|C/T|missense_variant 4.3292370932331545 0.7635526921153418 4 V 1 -1 11.259 0.0 0.0 1.0213 0.0 0.0 985.292483585073 0.0 985.292483585073 0.0 0.7080048751170906 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0213 - 65 + 1 3.347 39766.7 0.4300000071525574 279 2823 3103 HBL1_DMSO_200M_050219_2,3104 HBL1_DMSO_200M_050219_2,3104,DMEETYNDS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3115 13.787 800.0 130450.0 25 0 19941.0 -1 KELRNKQMK 9 124 397.56061348403887 1189.6600110523166 3 397.5601074099541 MULTI CID FTMS 0 0 0 3114 90461.34375 0.3039478338715068 -63 0.309732437133789 1 Oxidation (M) _KELRNKQM(Oxidation (M))K_ ENSG00000154781|ENST00000383794|CCDC174 14.40537977576856 0.4467465336100671 4 T{M(Oxidation (M))|F}K 3 -1 27.664 0.0 0.0 2.3254 0.0 0.0 795.4721715005531 0.0 795.4721715005531 0.0 5.981362441963327 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.0 T{M(Oxidation (M))|F}K 2.3254 - 84 1 3.347 85441.6 0.8999999761581421 280 2833 3114 HBL1_DMSO_200M_050219_2,3115 HBL1_DMSO_200M_050219_2,3115,KELRNKQMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3116 13.801 800.0 78605.0 25 0 6865.3 + 28819 QAAGAAVKHS 10 105 470.25455806923225 938.4945632052644 2 470.2546569705009 MULTI CID FTMS 0 0 0 3114 90716.28125 1.0 0 0.0 2 Unmodified _QAAGAAVKHS_ REV__ENST00000320623.9_1_16:69752155-69760649:-|nuORF 15.248480904072842 0.5916873121453583 4 [QA]AQ 4 -1 26.198 0.0 0.0 2.7915 0.0 0.0 0.0 537.2792051352579 537.2792051352579 15.228787452803374 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 [QA]AQ 2.7915 - 74 + 1 3.347 51813.3 0.4099999964237213 281 2833 3114 HBL1_DMSO_200M_050219_2,3116 HBL1_DMSO_200M_050219_2,3116,QAAGAAVKHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3119 13.821 800.0 97384.0 25 0 21337.0 + 41111 VNPITKET 8 109 451.2523621902456 0 451.2521545290947 PEAK CID FTMS 0 0 0 3118 67742.484375 0.5497405212019427 -4 0.0423994064331054 1 Unmodified _VNPITKET_ REV__ENSG00000196367|ENST00000456197|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5|TRRAP 2.577480529830294 0.5910327097116076 4 G 1 -1 1.9897 0.0 0.0 0.22096 0.0 0.0 715.3738059461178 125.07241235904532 840.4462183051631 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.22096 - 9 + 1 3.347 64179.6 0.4099999964237213 282 2835 3118 HBL1_DMSO_200M_050219_2,3119 HBL1_DMSO_200M_050219_2,3119,VNPITKET False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3123 13.837 257.0 211280.0 25 0 25353.0 -1 LSCPWNLSQG 10 80 581.272813215927 1160.531073498654 2 581.2726928591728 MULTI CID FTMS 0 0 0 3122 236381.390625 0.5357293257557021 27 -0.1741762161254882 1 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 23.78978130925829 0.4341852049148378 4 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}P[PS]QS 9 -1 26.188 0.0 0.0 2.2566 0.0 0.0 0.0 200.0714537078915 200.0714537078915 5.144002796252 0.0 0.0 0.0 0 1.2302046884880935 1.3979400086720375 0.9247425010840048 0.0 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}P[PS]QS 2.2566 - 121 1 3.347 43981.3 1.0 283 2838 3122 HBL1_DMSO_200M_050219_2,3123 HBL1_DMSO_200M_050219_2,3123,LSCPWNLSQG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3124 13.851 800.0 77954.0 25 0 13917.0 + 3440 CCESPKGSRE 10 95 548.231484127192 1094.4484153211838 2 548.2311889529228 MULTI CID FTMS 0 0 0 3122 74200.34375 0.6131162079516626 -55 0.2871675491333008 2 Unmodified _CCESPKGSRE_ REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF 8.745405648335112 0.6861838735306406 4 SPE[C(Carbamidomethyl (C))D] 5 -1 34.125 0.0 0.0 3.118 0.0 0.0 488.2712574689469 0.0 488.2712574689469 0.0 21.36041830751747 0.0 0.0 0 0.8807196863200843 0.0 0.8494850021680094 0.0 SPE[C(Carbamidomethyl (C))D] 3.118 - 30 1 3.347 52212.6 0.4000000059604645 284 2838 3122 HBL1_DMSO_200M_050219_2,3124 HBL1_DMSO_200M_050219_2,3124,CCESPKGSRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3127 13.871 800.0 42926.0 25 0 11972.0 -1 0 25 1105.4516311697098 3313.33306410933 3 1105.785571277142 MULTI CID FTMS 0 0 0 3126 80861.0546875 0.4417180692054984 -9 0.092142105102539 1 4 E 1 -1 5.4846 0.0 0.0 0.16553 0.0 0.0 2657.106419187028 524.1608980768186 3181.267317263847 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16553 - 11 + 1 3.347 37644.7 0.3600000143051147 285 2840 3126 HBL1_DMSO_200M_050219_2,3127 HBL1_DMSO_200M_050219_2,3127, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3134 13.899 284.0 479310.0 25 0 45472.0 + 44247 YLKAWRVG 8 113 331.52624044588106 991.5568919378431 3 331.5258361697197 MULTI CID FTMS 0 0 0 3133 174473.171875 0.7371088111645853 1 -0.0077638626098632 1 Unmodified _YLKAWRVG_ REV__ENSG00000168398|ENST00000554311|BDKRB2;REV__nc|ENSG00000168398|P30411-2|BDKRB2 9.38312468134398 0.7673771031149565 4 YAD 3 -1 35.851 0.0 0.0 3.6156 0.0 0.0 0.0 639.4054735195232 639.4054735195232 9.653251936605956 0.0 0.0 0.0 0 0.1694451763165201 1.0969100130080565 0.0 0.0 YAD 3.6156 - 70 + 1 3.347 111589.3 1.0 286 2846 3133 HBL1_DMSO_200M_050219_2,3134 HBL1_DMSO_200M_050219_2,3134,YLKAWRVG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3137 13.914 516.0 140060.0 25 0 45300.0 + 39143 TYLGNKRCFSN 11 66 434.8821624059175 0 434.8815185427666 PEAK CID FTMS 0 0 0 3136 150206.59375 0.7919676089185702 -12 0.0815887451171875 1 Unmodified _TYLGNKRCFSN_ REV__ENSG00000069188|ENST00000392650|SDK2;REV__nc|ENSG00000069188|Q58EX2-3|SDK2;REV__nc|ENSG00000069188|Q58EX2-4|SDK2 2.9952420565917617 0.4761840153648598 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.347 60666.3 1.0 287 2848 3136 HBL1_DMSO_200M_050219_2,3137 HBL1_DMSO_200M_050219_2,3137,TYLGNKRCFSN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3141 13.939 800.0 93373.0 25 0 7304.8 + 23251 LSVGSDASIQS 11 106 532.2669878780306 1062.519422822861 2 532.2673217654228 MULTI CID FTMS 0 0 0 3140 86671.015625 0.6678637443314698 -14 0.0971059799194336 1 Unmodified _LSVGSDASIQS_ REV__ENSG00000110514|ENST00000706887|MADD;REV__nc|ENSG00000110514|Q8WXG6-2|MADD;REV__nc|ENSG00000110514|Q8WXG6-3|MADD;REV__nc|ENSG00000110514|Q8WXG6-4|MADD;REV__nc|ENSG00000110514|Q8WXG6-5|MADD;REV__nc|ENSG00000110514|Q8WXG6-6|MADD;REV__nc|ENSG00000110514|Q8WXG6-7|MADD;REV__nc|ENSG00000110514|Q8WXG6-8|MADD;REV__nc|ENSG00000110514|Q8WXG6|MADD 10.150570793230772 0.8240029794358671 4 [HV]KDDR{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 8 -1 + 16.655 0.0 0.0 1.5675 1.5675 74.121 0.0 0.0 0.0 5.942124970647033 4.198018647354186 4.198018647354186 9.262137858390815 0 0.0 0.0 0.0 0.0 [HV]KDDR{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[HV]KDD[VG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 1.5675;0.69583 -;- 158 + 1 3.347 62727.5 0.4199999868869781 288 2851 3140 HBL1_DMSO_200M_050219_2,3141 HBL1_DMSO_200M_050219_2,3141,LSVGSDASIQS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3146 13.967 800.0 53774.0 25 0 12843.0 -1 0 32 1061.3637832750994 2120.713013616999 2 1061.365161120892 MULTI CID FTMS 0 0 0 3145 81224.296875 0.6489816471709772 -23 0.1842422485351562 1 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 7 1 3.347 46776.9 0.3199999928474426 289 2855 3145 HBL1_DMSO_200M_050219_2,3146 HBL1_DMSO_200M_050219_2,3146, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3161 14.036 800.0 83251.0 25 0 9485.2 8403 ESENRSYE 8 97 507.2121977816716 1012.4098426301432 2 507.2125121951103 MULTI CID FTMS 0 0 0 3160 101998.3984375 0.523410604426866 -17 0.0808115005493164 1 Unmodified _ESENRSYE_ ENSG00000100241|ENST00000380817|SBF1;ENST00000444527.2_1_8:56362086-56362449:-|nuORF;nc|ENSG00000100241|O95248-4|SBF1;nc|ENSG00000100241|O95248|SBF1 36.04419817259434 0.3004715606373109 4 {M(Oxidation (M))|F}SQE{[WT]|[RM]}SE 8 4 + 58.81 0.0 0.0 5.8089 5.8089 73.142 0.0 0.0 0.0 38.76561777552956 14.704751719805015 14.704751719805015 1.0353127608303936 0 0.0 0.0 1.3684151806525389 0.0 {M(Oxidation (M))|F}SQE{[WT]|[RM]}SE;{M(Oxidation (M))|F}SQK{[CA]|SS}NSE;{M(Oxidation (M))|F}S[AG]E{[WT]|[RM]}SE;{M(Oxidation (M))|F}S[AG]K{[CA]|SS}NSE;{M(Oxidation (M))|F}SQK{[CA]|SS}GGSE;{[ES]|[DT]|[{I|L}C]}{[WT]|[RM]}{M(Oxidation (M))|F}QSE;{M(Oxidation (M))|F}SQ[YG]{[{M(Oxidation (M))|F}H]|[RQ]}Q;{M(Oxidation (M))|F}SQ{M(Oxidation (M))|F}[HQ][YG];{[MG]|[TS]}[WE]{M(Oxidation (M))|F}QSE;{[ES]|[DT]|[{I|L}C]}{[WT]|[RM]}{M(Oxidation (M))|F}[AG]SE 5.8089;5.7066;4.894;4.7971;4.7971;3.3325;2.6421;2.576;2.5408;2.4176 -;-;-;-;-;-;-;-;-;- 326 + 1 3.347 54525.4 0.9800000190734864 290 2869 3160 HBL1_DMSO_200M_050219_2,3161 HBL1_DMSO_200M_050219_2,3161,ESENRSYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3163 14.048 534.0 244730.0 25 0 17937.0 -1 KELRNKQMK 9 108 397.56061348403887 1189.6600110523166 3 397.5605956912041 MULTI CID FTMS 0 0 0 3162 233784.40625 0.7855097097496283 -26 0.1527271270751953 1 Oxidation (M) _KELRNKQM(Oxidation (M))K_ ENSG00000154781|ENST00000383794|CCDC174 18.373094154950223 0.3393451798331396 4 KTT[{I|L}P]Q 6 -1 40.323 0.0 0.0 3.3894 0.0 0.0 63.99884036230544 454.2424105279906 518.2412508902961 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 1.274227503252014 0.3807196863200844 KTT[{I|L}P]Q 3.3894 - 279 + 1 3.347 105577.9 1.0 291 2870 3162 HBL1_DMSO_200M_050219_2,3163 HBL1_DMSO_200M_050219_2,3163,KELRNKQMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3175 14.105 800.0 81994.0 25 0 13568.0 + 3441 CCESPKGSRE 10 100 548.231484127192 1094.4484153211838 2 548.2324096560478 MULTI CID FTMS 0 0 0 3174 68308.7578125 0.5644341312083005 -12 0.0679244995117187 1 Unmodified _CCESPKGSRE_ REV__ENST00000528706.5_1_11:117279912-117282881:+|nuORF 13.042465956692816 0.6287021003332052 4 AEP 3 -1 27.747 0.0 0.0 2.5353 0.0 0.0 222.0081209870025 572.2789400690061 794.2870610560087 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 AEP 2.5353 - 64 + 1 3.347 56513.6 0.4399999976158142 292 2881 3174 HBL1_DMSO_200M_050219_2,3175 HBL1_DMSO_200M_050219_2,3175,CCESPKGSRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3190 14.173 800.0 194170.0 25 0 23559.0 23945 LVRGPAEREK 10 156 385.5595437401901 1153.6568018207704 3 385.5596191287041 MULTI CID FTMS 0 0 0 3189 54163.0546875 0.2572061542160074 -12 0.0478429794311523 1 Unmodified _LVRGPAEREK_ ENST00000394235.6_1_4:140060608-140098371:-|nuORF 16.149105407346934 0.5765757077271437 4 {I|L}[RP]RV{M(Oxidation (M))|F}QE 8 7 39.046 0.0 0.0 3.3845 0.0 0.0 0.0 125.07229028873282 125.07229028873282 21.087228004190383 0.0 0.0 0.0 0 0.0796896906561032 0.0 0.4896518287104437 0.4247425010840047 {I|L}[RP]RV{M(Oxidation (M))|F}QE 3.3845 - 798 + 1 3.347 125209.5 0.949999988079071 293 2895 3189 HBL1_DMSO_200M_050219_2,3190 HBL1_DMSO_200M_050219_2,3190,LVRGPAEREK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3193 14.191 630.0 133690.0 25 0 43018.0 + 39144 TYLGNKRCFSN 11 78 434.8821624059175 0 434.8820068240166 PEAK CID FTMS 0 0 0 3192 128897.0 0.6796123015523541 37 -0.2794628143310547 1 Unmodified _TYLGNKRCFSN_ REV__ENSG00000069188|ENST00000392650|SDK2;REV__nc|ENSG00000069188|Q58EX2-3|SDK2;REV__nc|ENSG00000069188|Q58EX2-4|SDK2 2.9952420565917617 0.4761840153648598 4 A 1 -1 4.6041 0.0 0.0 0.53058 0.0 0.0 362.4864489800006 431.1919039361938 793.6783529161944 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.53058 - 2 + 1 3.347 70890.1 1.0 294 2897 3192 HBL1_DMSO_200M_050219_2,3193 HBL1_DMSO_200M_050219_2,3193,TYLGNKRCFSN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3194 14.205 800.0 116290.0 25 0 54257.0 -1 0 83 490.2832351579354 489.2759586913354 1 490.2836791872978 MULTI CID FTMS 0 0 0 3192 85966.8046875 0.6714427601925506 -44 0.2346839904785156 2 4 P 1 -1 10.837 0.0 0.0 2.215 0.0 0.0 374.2124343766854 0.0 374.2124343766854 0.0 0.2415233978727737 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.215 - 19 + 1 3.347 77297.6 0.4099999964237213 295 2897 3192 HBL1_DMSO_200M_050219_2,3194 HBL1_DMSO_200M_050219_2,3194, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3197 14.223 684.0 132540.0 25 0 19931.0 -1 IRAPTTMK 8 105 467.2628422123384 932.5111314914768 2 467.2628967165947 MULTI CID FTMS 0 0 0 3196 113563.1796875 0.2087086553729579 -94 0.5636358261108398 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 22.736283301280096 0.5659792798204337 4 T{M(Oxidation (M))|F}K 3 -1 42.945 0.0 0.0 4.6053 0.0 0.0 538.3226281217674 0.0 538.3226281217674 0.0 26.13036148946009 0.0 0.0 0 1.25 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 4.6053 + + 107 1 3.347 76151.2 1.0 296 2899 3196 HBL1_DMSO_200M_050219_2,3197 HBL1_DMSO_200M_050219_2,3197,IRAPTTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3203 14.248 360.0 220970.0 25 0 34405.0 + 36052 SVQHVDAAEK 10 106 361.8523343504755 0 361.8523132205009 PEAK CID FTMS 0 0 0 3202 119175.40625 0.8000417473686309 -23 0.1518259048461914 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2099104859468384 4 VD 2 8 9.464 0.0 0.0 1.3114 0.0 0.0 90.37155680826945 414.1994417779906 504.5709985862601 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + VD 1.3114 + + 36 + 1 3.347 70629.5 1.0 297 2904 3202 HBL1_DMSO_200M_050219_2,3203 HBL1_DMSO_200M_050219_2,3203,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3211 14.286 620.0 247570.0 25 0 17543.0 -1 0 169 346.0345375511726 0 346.0345031619072 PEAK CID FTMS 0 0 0 3210 108581.09375 0.6545836226317913 34 -0.2379484176635742 1 4 H 1 -1 6.9897 0.0 0.0 1.0129 0.0 0.0 83.79750220801482 466.1774996393188 549.9750018473336 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.0129 - 15 + 1 3.347 122336.9 1.0 298 2911 3210 HBL1_DMSO_200M_050219_2,3211 HBL1_DMSO_200M_050219_2,3211, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3214 14.306 800.0 148940.0 25 0 9679.0 -1 KELRNKQMK 9 137 397.56061348403887 1189.6600110523166 3 397.5606872439384 MULTI CID FTMS 0 0 0 3213 92468.0859375 0.3106904370182702 17 -0.1420927047729492 1 Oxidation (M) _KELRNKQM(Oxidation (M))K_ ENSG00000154781|ENST00000383794|CCDC174 20.41453444215458 0.284085796332423 4 KTT[{I|L}P]Q 6 -1 39.456 0.0 0.0 3.3165 0.0 0.0 63.99768020021822 454.2451876276001 518.2428678278183 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 1.274227503252014 0.4247425010840047 KTT[{I|L}P]Q 3.3165 - 215 + 1 3.347 96119.9 0.5 299 2913 3213 HBL1_DMSO_200M_050219_2,3214 HBL1_DMSO_200M_050219_2,3214,KELRNKQMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3215 14.32 800.0 67690.0 25 0 8225.7 8404 ESENRSYE 8 92 507.2121977816716 1012.4098426301432 2 507.2123901247978 MULTI CID FTMS 0 0 0 3213 103368.265625 0.5304401561019666 27 -0.1930513381958007 2 Unmodified _ESENRSYE_ ENSG00000100241|ENST00000380817|SBF1;ENST00000444527.2_1_8:56362086-56362449:-|nuORF;nc|ENSG00000100241|O95248-4|SBF1;nc|ENSG00000100241|O95248|SBF1 18.13498045792455 0.6430038125133779 4 NSE 3 5 35.635 0.0 0.0 3.5198 0.0 0.0 664.2895556201807 0.0 664.2895556201807 0.0 30.150064313529 0.0 0.0 0 0.5 0.0 0.5941876774005248 0.0 NSE 3.5198 - 99 + 1 3.347 47226.0 0.449999988079071 300 2913 3213 HBL1_DMSO_200M_050219_2,3215 HBL1_DMSO_200M_050219_2,3215,ESENRSYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3223 14.36 800.0 59184.0 25 0 5812.8 + 34864 SQGFSHSQM 9 95 512.7111139057582 1023.4076748783164 2 512.7114135622978 MULTI CID FTMS 0 0 0 3222 68038.90625 0.8118025871291569 -6 0.0239982604980468 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 47.594388314883695 0.0456443387682827 4 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 39.842 0.0 0.0 3.8931 3.8931 74.023 0.0 0.0 0.0 10.62648016805343 23.72241220664947 10.62648016805343 6.47817481888638 0 1.1677353201839438 0.0 0.6307196863200843 0.3494850021680094 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]SW{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};[HS][YQ]QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}{[QS]|[NT]} 3.8931;3.2601;3.1159;2.9933;2.5744;2.4829;2.4525;2.355;2.2912;2.2161 -;-;-;-;-;-;-;-;-;- 226 1 3.347 42574.4 0.4199999868869781 301 2920 3222 HBL1_DMSO_200M_050219_2,3223 HBL1_DMSO_200M_050219_2,3223,SQGFSHSQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3224 14.374 800.0 103460.0 25 0 15199.0 + -1 GVGNKLTMK 9 112 482.2680565254815 962.521560117763 2 482.2681762576103 MULTI CID FTMS 0 0 0 3222 94750.25 0.3635486378113087 -68 0.4052743911743164 2 Oxidation (M) _GVGNKLTM(Oxidation (M))K_ REV__ENST00000604354.1_1_5:180743383-180748792:+|nuORF 24.020572477871973 0.2255576514309169 4 ST{M(Oxidation (M))|F}K 4 -1 39.836 0.0 0.0 4.1388 0.0 0.0 481.3078282835817 0.0 481.3078282835817 0.0 10.65266016045338 0.0 0.0 0 1.0 0.0 0.2614393726401688 0.5283773187068795 ST{M(Oxidation (M))|F}K 4.1388 - 265 + 1 3.347 66982.0 0.4399999976158142 302 2920 3222 HBL1_DMSO_200M_050219_2,3224 HBL1_DMSO_200M_050219_2,3224,GVGNKLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3232 14.412 646.0 33689.0 25 0 3391.5 -1 0 49 673.3065615894952 2016.8978553686857 3 673.3075439333916 MULTI CID FTMS 0 0 0 3231 78047.15625 0.6868379497294185 -7 0.0539894104003906 1 4 Y 1 -1 14.604 0.0 0.0 0.72409 0.0 0.0 1835.82368041927 0.0 1835.82368041927 0.0 -3.979400086720375 -3.979400086720375 0.0 0 0.0 0.0 0.0 0.0 Y 0.72409 - 12 + 1 3.347 25598.5 1.0 303 2927 3231 HBL1_DMSO_200M_050219_2,3232 HBL1_DMSO_200M_050219_2,3232, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3234 14.428 779.0 207920.0 25 0 27883.0 23946 LVRGPAEREK 10 154 385.5595437401901 1153.6568018207704 3 385.5592834353447 MULTI CID FTMS 0 0 0 3233 92818.0625 0.4407686574390279 21 -0.1269798278808593 1 Unmodified _LVRGPAEREK_ ENST00000394235.6_1_4:140060608-140098371:-|nuORF 24.99096001346401 0.4071966087057876 4 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}P]KV 10 8 46.661 0.0 0.0 4.0446 0.0 0.0 0.0 110.06132721669374 110.06132721669374 23.78788171606273 0.0 0.0 0.0 0 0.1989700043360188 2.0 1.4559771852360797 0.4247425010840047 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}P]KV 4.0446 - 472 1 3.347 132034.9 1.0 304 2928 3233 HBL1_DMSO_200M_050219_2,3234 HBL1_DMSO_200M_050219_2,3234,LVRGPAEREK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3237 14.445 609.0 204470.0 25 0 22828.0 + 39643 VDWELHVEK 9 136 385.531805438272 1153.5735869150162 3 385.5313903689384 MULTI CID FTMS 0 0 0 3236 84976.328125 0.7033279784473383 1 -0.0131645202636718 1 Unmodified _VDWELHVEK_ REV__ENSG00000075420|ENST00000415807|FNDC3B 14.838274106304384 0.4350285940865338 4 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}AE{M(Oxidation (M))|F}[KG] 11 -1 + 46.589 0.0 0.0 4.0386 4.0386 74.14 0.0 0.0 0.0 21.804560644581308 7.367585652254178 7.367585652254178 6.197887582883936 0 0.0 2.0 0.6421590589602533 0.0 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}AE{M(Oxidation (M))|F}[KG];[VS]AQ[{M(Oxidation (M))|F}V][DG]{M(Oxidation (M))|F}[KG];[VS]A[AG]{[MS]|[{M(Oxidation (M))|F}A]}AE{M(Oxidation (M))|F}[KG];[VS]A[{M(Oxidation (M))|F}E]AAQ{M(Oxidation (M))|F}[KG];[VS]AQ[{M(Oxidation (M))|F}V]A[{M(Oxidation (M))|F}T][KG];[VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}Y[KG];[VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T][KG];[VS]A[{M(Oxidation (M))|F}E]AA[AG]{M(Oxidation (M))|F}[KG];[VS]A[{M(Oxidation (M))|F}V]Q[DG]{M(Oxidation (M))|F}[KG];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{[MS]|[{M(Oxidation (M))|F}A]}AE{M(Oxidation (M))|F}[KG] 4.0386;3.5014;3.2473;3.147;3.0878;2.7986;2.6741;2.3557;2.3441;2.1485 -;-;-;-;-;-;-;-;-;- 892 1 3.347 104884.2 1.0 305 2930 3236 HBL1_DMSO_200M_050219_2,3237 HBL1_DMSO_200M_050219_2,3237,VDWELHVEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3243 14.467 175.0 353790.0 25 0 55580.0 -1 IRAPTTMK 8 86 467.2628422123384 932.5111314914768 2 467.2630187869072 MULTI CID FTMS 0 0 0 3242 322074.96875 0.5919157410181154 -58 0.3894577026367187 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 19.256988751693697 0.6264283240490721 4 T{M(Oxidation (M))|F}K 3 -1 33.232 0.0 0.0 3.5637 0.0 0.0 538.3229123526081 0.0 538.3229123526081 0.0 19.45931800153943 0.0 0.0 0 1.0 0.0 0.0 0.3054621874040891 T{M(Oxidation (M))|F}K 3.5637 + + 83 + 1 3.347 52829.6 1.0 306 2935 3242 HBL1_DMSO_200M_050219_2,3243 HBL1_DMSO_200M_050219_2,3243,IRAPTTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3252 14.506 513.0 245520.0 25 0 24768.0 + -1 TADPRSREV 9 132 344.1801338538427 343.1728573872427 1 344.1810790896416 MULTI CID FTMS 0 0 0 3251 81659.7890625 0.1143656783210148 -55 0.3655080795288086 1 ENSG00000132361|ENST00000651024|CLUH 4 [EP]V 3 -1 + 30.837 0.0 0.0 8.9859 8.9859 80.255 0.0 0.0 0.0 0.4334323590189832 0.4334323590189832 0.4334323590189832 0.4334323590189832 0 0.1171302707394362 1.2218487496163564 0.0 0.0 [EP]V;PEV;{I|L}DP;{NN|[MP]|[D{I|L}]|[EV]}P;[{I|L}P]D;[VP]E 8.9859;8.8596;8.6575;4.4556;4.3124;1.4619 -;-;-;-;-;- 42 1 3.347 104353.6 1.0 307 2943 3251 HBL1_DMSO_200M_050219_2,3252 HBL1_DMSO_200M_050219_2,3252, False False TADPRSREV 14.506344 344.181079089642 5354861.5 3251.0 ENSG00000132361|ENST00000651024|CLUH 2.637421359618505 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3257 14.535 800.0 24974.0 25 0 1248.6 -1 0 30 927.1602174171054 3704.611763802021 4 927.4109985232352 MULTI CID FTMS 0 0 0 3256 61226.2734375 0.6008352239377195 -12 0.0573892593383789 1 4 AT 2 -1 6.3362 0.0 0.0 0.17104 0.0 0.0 2695.201247258508 834.3025606744749 3529.503807932983 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6203715150305281 0.0 AT 0.17104 - 5 + 1 3.347 24258.3 0.3499999940395355 308 2947 3256 HBL1_DMSO_200M_050219_2,3257 HBL1_DMSO_200M_050219_2,3257, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3260 14.551 572.0 194190.0 25 0 9894.0 -1 LYQEGAKM 8 128 478.22990353783655 954.4452541424732 2 478.2294189333916 MULTI CID FTMS 0 0 0 3259 59298.984375 0.5953399015002424 -4 0.028447151184082 1 Oxidation (M) _LYQEGAKM(Oxidation (M))_ ENSG00000173801|ENST00000393931|JUP 15.847184025352805 0.6768015514314958 4 {I|L}YQEQ{M(Oxidation (M))|F}K 7 -1 + 48.694 0.0 0.0 5.1018 5.1018 74.984 0.0 0.0 0.0 25.932177645990485 3.5514342509639363 3.5514342509639363 3.5514342509639363 0 0.1989700043360188 2.0 0.0 0.2302046884880938 {I|L}YQEQ{M(Oxidation (M))|F}K;{I|L}YQEQK{M(Oxidation (M))|F};{I|L}YQE[AG]{M(Oxidation (M))|F}K;{I|L}YQG{M(Oxidation (M))|F}AEK;{I|L}YQE[AG]K{M(Oxidation (M))|F};{[DA]|[EG]}HVDAAEK;{I|L}YQ[MN]{[WT]|[RM]};{I|L}YQG{[MG]|[TS]}{[WT]|[RM]};{[DA]|[EG]}HERAEK;[HV]{[QG]|[NA]}[HC]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.1018;4.7297;4.1242;3.8255;3.7521;2.3848;2.2467;2.103;1.7061;0.82821 -;-;-;-;+;-;-;-;-;- + 405 + 1 3.347 87053.7 1.0 309 2949 3259 HBL1_DMSO_200M_050219_2,3260 HBL1_DMSO_200M_050219_2,3260,LYQEGAKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3268 14.587 518.0 220840.0 25 0 11141.0 + 35733 SVHNELEK 8 131 478.2475622809776 954.4805716287552 2 478.2482177615166 MULTI CID FTMS 0 0 0 3267 60077.6171875 0.5725443669794716 1 -0.0116872787475585 1 Unmodified _SVHNELEK_ ENSG00000213347|ENST00000439742|MXD3;ENST00000503473.5_1_5:176737667-176737736:-|nuORF;nc|ENSG00000213347|Q9BW11-3|MXD3;nc|ENSG00000213347|Q9BW11-4|MXD3 34.10243960390752 0.3329570729325616 4 [VS]HVD 5 5 42.681 0.0 0.0 4.4716 0.0 0.0 0.0 414.1998385065063 414.1998385065063 9.814513295985478 0.0 0.0 0.0 0 1.0629529932484498 1.5228787452803376 0.0 0.0 [VS]HVD 4.4716 - 448 + 1 3.347 88698.7 1.0 310 2956 3267 HBL1_DMSO_200M_050219_2,3268 HBL1_DMSO_200M_050219_2,3268,SVHNELEK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3276 14.621 403.0 170520.0 25 0 28021.0 + -1 GVGNKLTMK 9 87 482.2680565254815 962.521560117763 2 482.2685119509697 MULTI CID FTMS 0 0 0 3275 171433.265625 0.6577748364095398 -25 0.135843276977539 1 Oxidation (M) _GVGNKLTM(Oxidation (M))K_ REV__ENST00000604354.1_1_5:180743383-180748792:+|nuORF 24.020572477871973 0.2255576514309169 4 TTP{I|L}E{M(Oxidation (M))|F}Q 7 -1 42.383 0.0 0.0 4.4033 0.0 0.0 128.0952625959 0.0 128.0952625959 0.0 20.26879789609012 0.0 0.0 0 0.8182503180159344 0.0 0.8494850021680094 0.0 TTP{I|L}E{M(Oxidation (M))|F}Q 4.4033 - 188 1 3.347 60465.0 1.0 311 2963 3275 HBL1_DMSO_200M_050219_2,3276 HBL1_DMSO_200M_050219_2,3276,GVGNKLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3290 14.685 737.0 132590.0 25 0 38086.0 + 36491 TADPRSREV 9 85 515.7670531145988 1029.5195532959974 2 515.7675048708916 MULTI CID FTMS 0 0 0 3289 79696.2890625 0.3510431714835719 -22 0.1010408401489257 1 Unmodified _TADPRSREV_ ENSG00000132361|ENST00000651024|CLUH 10.823927491677226 0.5436922275383211 4 [TA]D 3 6 23.697 0.0 0.0 2.3017 0.0 0.0 0.0 739.3848541595318 739.3848541595318 13.239087409443185 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 + [TA]D 2.3017 + + 35 1 3.347 76673.8 1.0 312 2976 3289 HBL1_DMSO_200M_050219_2,3290 HBL1_DMSO_200M_050219_2,3290,TADPRSREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3297 14.721 800.0 101460.0 25 0 9523.5 + 28488 PTKGRADLTQ 10 85 543.7988021981774 1085.5830514631548 2 543.7990600466728 MULTI CID FTMS 0 0 0 3296 66438.484375 0.0201169313849077 -79 0.4694719314575195 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 22.65808497894818 0.4596126414678359 4 TPKV[YN]GTP 9 -1 80.966 0.0 0.0 7.4583 0.0 0.0 0.0 125.07230554752188 125.07230554752188 59.99668131245279 0.0 0.0 0.0 0 1.086696871556164 1.6989700043360187 0.4247425010840047 0.4247425010840047 TPKV[YN]GTP 7.4583 - 343 + 1 3.347 70017.8 0.5099999904632568 313 2982 3296 HBL1_DMSO_200M_050219_2,3297 HBL1_DMSO_200M_050219_2,3297,PTKGRADLTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3299 14.727 142.0 422050.0 25 0 70988.0 -1 RGILAEMK 8 81 467.2628422123384 932.5111314914768 2 467.2630493044853 MULTI CID FTMS 0 0 0 3298 425159.96875 0.7813673907370209 -10 0.0648870468139648 1 Oxidation (M) _RGILAEM(Oxidation (M))K_ ENSG00000169105|ENST00000306243|CHST14 16.942295170755138 0.6606234159769251 4 {M(Oxidation (M))|F}K 2 -1 26.013 0.0 0.0 2.7896 0.0 0.0 639.370000975655 0.0 639.370000975655 0.0 10.875371849193623 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 {M(Oxidation (M))|F}K 2.7896 + + 105 + 1 3.347 55325.9 1.0 314 2983 3298 HBL1_DMSO_200M_050219_2,3299 HBL1_DMSO_200M_050219_2,3299,RGILAEMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3302 14.743 573.0 111710.0 25 0 13423.0 + 11000 GASEGWGTNM 10 111 513.2029212669646 1024.3912896007291 2 513.2024413943291 MULTI CID FTMS 0 0 0 3301 105340.7890625 0.1929757182665381 -34 0.1752738952636718 1 Oxidation (M) _GASEGWGTNM(Oxidation (M))_ REV__ENST00000576921.1_1_16:3073701-3073800:-|nuORF 41.8396318013385 0.1381409678234242 4 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}ETN{M(Oxidation (M))|F} 9 -1 + 63.201 0.0 0.0 6.1697 6.1697 88.18 0.0 0.0 0.0 20.32969359948829 45.01377987377856 20.32969359948829 11.830984399557424 0 1.492992819099939 0.7958800173440752 1.0941876774005248 0.6237125054200234 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}ETN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}TEN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}ETN{M(Oxidation (M))|F};{[QS]|[NT]}G[MD]SW{[QS]|[NT]};{[QS]|[NT]}G[MD]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}TEN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}E{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[PS][C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))M]{[CP]|[EA]} 6.1697;5.0147;4.9786;4.9284;4.6834;3.9968;3.7735;3.7373;3.0467;2.9248 -;-;-;-;-;-;-;-;-;- 334 1 3.347 56621.2 1.0 315 2985 3301 HBL1_DMSO_200M_050219_2,3302 HBL1_DMSO_200M_050219_2,3302,GASEGWGTNM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3305 14.752 107.0 792160.0 25 0 167000.0 -1 0 79 344.1801338538427 343.1728573872427 1 344.1806518435478 MULTI CID FTMS 0 0 0 3304 548926.1875 0.7687788139344491 -11 0.0789623260498046 1 4 [TA]D 3 -1 32.162 0.0 0.0 9.3721 0.0 0.0 0.0 53.0379580685819 53.0379580685819 4.715141619232909 0.0 0.0 0.0 0 0.0 2.0 0.4715141619232907 0.0 [TA]D 9.3721 - 21 1 3.347 72356.4 1.0 316 2987 3304 HBL1_DMSO_200M_050219_2,3305 HBL1_DMSO_200M_050219_2,3305, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3308 14.769 602.0 160880.0 25 0 11240.0 + 39369 VAGWGPRCLSV 11 144 382.20357719171 1143.58890217533 3 382.2034789919853 MULTI CID FTMS 0 0 0 3307 93982.140625 0.2723870576707151 -19 0.1117362976074218 1 Unmodified _VAGWGPRCLSV_ REV__ENST00000486927.1_1_2:38585669-38586665:-|nuORF;REV__ENST00000490395.5_1_17:15880973-15881216:-|nuORF 18.1463463914782 0.6576820063886638 4 [TP]KDGSSRPTV 11 -1 + 76.843 0.0 0.0 6.7194 6.7194 90.672 0.0 0.0 0.0 9.977825707218614 61.57019996400406 9.977825707218614 12.892977826634862 0 1.424742501084005 1.3979400086720375 0.9978499570595206 0.0 [TP]KDGSSRPTV;[KP]TDGSSRPTV;[TP]AATGSSRPTV;{[QD]|[EN]|[WG]|[KD]|[RS]}PTGSDKPTV;[KP]DTGSSRPTV;[VS]GPTGSSRPTV;{[QD]|[EN]|[WG]|[KD]|[RS]}PTGSSRPTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[YR]KPTV;{[VA]|[{I|L}G]}[VG]DGSSRPTV;[TP]KD[KC][VG]PTV 6.7194;5.592;5.5498;5.2629;5.2206;4.8284;4.8033;4.7923;4.6845;4.5082 -;-;-;-;-;-;-;-;-;- 1548 1 3.348 85228.7 1.0 317 2989 3307 HBL1_DMSO_200M_050219_2,3308 HBL1_DMSO_200M_050219_2,3308,VAGWGPRCLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3311 14.789 800.0 97292.0 25 0 10913.0 + 18464 KYIEKVSSR 9 79 555.3191815343986 1108.623810135597 2 555.3191406130791 MULTI CID FTMS 0 0 0 3310 91309.5234375 0.7738667511361903 -3 0.0208930969238281 1 Unmodified _KYIEKVSSR_ ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF 35.61225514009592 0.0995432151795903 4 KY{I|L}EKVGY 8 3 68.749 0.0 0.0 6.2012 0.0 0.0 0.0 125.07236658267811 125.07236658267811 55.2536691925237 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 KY{I|L}EKVGY 6.2012 - 131 + 1 3.348 63948.1 0.449999988079071 318 2991 3310 HBL1_DMSO_200M_050219_2,3311 HBL1_DMSO_200M_050219_2,3311,KYIEKVSSR True True KYIEKVSSR 14.789355 555.319140613079 467767.46875 3310.0 ENST00000477668.5_1_3:127323572-127337961:+|nuORF;;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2 6.428913116455078 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3314 14.798 43.0 1287100.0 25 0 129910.0 + 19777 LGRSQPATGTV 11 83 362.86840965139663 1085.58339955439 3 362.8682128787041 MULTI CID FTMS 0 0 0 3313 1025425.0625 0.0817961744431889 -68 0.4030694961547851 1 Unmodified _LGRSQPATGTV_ REV__ENST00000435011.6_3_6:142623767-142688843:+|nuORF;REV__ENST00000541199.5_3_6:142623767-142688843:+|nuORF 19.361941925380144 0.6323962752489956 4 SKPTV 5 -1 48.901 0.0 0.0 4.5046 0.0 0.0 555.2783070294937 0.0 555.2783070294937 0.0 32.89713149807212 0.0 0.0 0 0.5 0.0 1.610924374808178 0.0 SKPTV 4.5046 - 175 1 3.348 55519.6 1.0 319 2993 3313 HBL1_DMSO_200M_050219_2,3314 HBL1_DMSO_200M_050219_2,3314,LGRSQPATGTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3318 14.822 800.0 116070.0 25 0 11456.0 19105 LDSQSPHD 8 128 449.6979371976209 897.3813214620418 2 449.6987792849541 MULTI CID FTMS 0 0 0 3317 119238.4765625 0.6449830857292576 -6 0.036879539489746 1 Unmodified _LDSQSPHD_ ENSG00000204577|ENST00000445347|LILRB3;nc|ENSG00000204577|O75022-2|LILRB3;nc|ENSG00000204577|O75022|LILRB3 18.13498045792455 0.6430038125133779 4 {[ES]|[DT]|[{I|L}C]}VQ[WY]S 7 6 + 27.014 0.0 0.0 3.0103 3.0103 77.63 0.0 0.0 0.0 8.162425614186517 7.110378393053896 7.110378393053896 14.423239215968572 0 0.25 0.0 0.4690370897582285 0.7059771852360797 {[ES]|[DT]|[{I|L}C]}VQ[WY]S;{[QV]|[N{I|L}]|[RA]|[KV]}SE[WY]S;{[ES]|[DT]|[{I|L}C]}V[AG][WY]S;{[ES]|[DT]|[{I|L}C]}[H{I|L}]YYS;{[ES]|[DT]|[{I|L}C]}[YR]EQS;{[QV]|[N{I|L}]|[RA]|[KV]}S[HT][HC]S;[HT]S[HC]VQS;{[ES]|[DT]|[{I|L}C]}[WY]VQS;{[ES]|[DT]|[{I|L}C]}E[YR]QS 3.0103;1.403;1.1838;0.67951;0.67457;0.41161;0.25602;0.23113;0.1166 -;-;-;-;-;-;-;-;- 264 + 1 3.348 77094.7 0.4900000095367431 320 2996 3317 HBL1_DMSO_200M_050219_2,3318 HBL1_DMSO_200M_050219_2,3318,LDSQSPHD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3322 14.847 800.0 82175.0 25 0 9261.8 38083 TPKDDWAALK 10 73 572.8011924535538 1143.5878319739074 2 572.8014404177666 MULTI CID FTMS 0 0 0 3321 59960.30078125 0.6031327005834378 -3 0.0242385864257812 1 Unmodified _TPKDDWAALK_ ENSG00000187531|ENST00000328666|SIRT7;ENST00000572976.5_1_17:79870294-79872532:-|nuORF;ENST00000574153.1_1_17:79871648-79872097:-|nuORF;ENST00000574992.5_1_17:79871648-79872373:-|nuORF;nc|ENSG00000187531|Q9NRC8-3|SIRT7 26.020703789607367 0.3840598856887971 4 TPKDV[YN]TP 9 6 66.124 0.0 0.0 5.7822 0.0 0.0 0.0 125.07239710025624 125.07239710025624 48.68948444925195 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.3494850021680094 0.0 TPKDV[YN]TP 5.7822 - 158 + 1 3.348 52615.5 0.4699999988079071 321 2999 3321 HBL1_DMSO_200M_050219_2,3322 HBL1_DMSO_200M_050219_2,3322,TPKDDWAALK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3323 14.86 800.0 88733.0 25 0 4652.7 + 43495 WWRVCDQNA 9 102 589.2652258719131 1176.515898810626 2 589.2642700076103 MULTI CID FTMS 0 0 0 3321 81187.015625 0.476866556871678 -33 0.2017650604248047 2 Unmodified _WWRVCDQNA_ REV__ENST00000523376.5_1_11:14926604-14927012:+|nuORF 13.90604991867851 0.4602628045680013 4 DQQAEWQ{[QG]|[NA]} 9 -1 49.901 0.0 0.0 4.2414 0.0 0.0 88.06190493782385 0.0 88.06190493782385 0.0 37.80033272627976 0.0 0.0 0 0.0 0.0 0.0 1.1307196863200843 DQQAEWQ{[QG]|[NA]} 4.2414 - 902 + 1 3.348 63977.1 0.4600000083446502 322 2999 3321 HBL1_DMSO_200M_050219_2,3323 HBL1_DMSO_200M_050219_2,3323,WWRVCDQNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3326 14.881 800.0 122600.0 25 0 18224.0 + -1 GVGNKLTMK 9 111 482.2680565254815 962.521560117763 2 482.2681762576103 MULTI CID FTMS 0 0 0 3325 152902.53125 0.586673987180388 13 -0.093414306640625 1 Oxidation (M) _GVGNKLTM(Oxidation (M))K_ REV__ENST00000604354.1_1_5:180743383-180748792:+|nuORF 27.628801355627647 0.1796483985696185 4 Q{M(Oxidation (M))|F}[{I|L}P]T{M(Oxidation (M))|F}K 7 -1 39.487 0.0 0.0 4.1025 0.0 0.0 83.07425124336093 0.0 83.07425124336093 0.0 12.583107092853822 0.0 0.0 0 1.6307196863200843 0.0 0.5 0.0 Q{M(Oxidation (M))|F}[{I|L}P]T{M(Oxidation (M))|F}K 4.1025 - 249 1 3.348 80756.3 0.550000011920929 323 3001 3325 HBL1_DMSO_200M_050219_2,3326 HBL1_DMSO_200M_050219_2,3326,GVGNKLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3333 14.908 264.0 215470.0 25 0 11782.0 37106 TGTAVQLSWEL 11 87 402.2106535648337 1203.6101312947012 3 402.2108032107353 MULTI CID FTMS 0 0 0 3332 121586.6875 0.5088580247458521 -10 0.0781269073486328 1 Unmodified _TGTAVQLSWEL_ ENSG00000110046|ENST00000377264|ATG2A;nc|ENSG00000110046|Q2TAZ0-3|ATG2A 9.764250979337303 0.8290795630453686 4 [PS]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}AADNK 11 11 [PS]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} + + 26.793 -15.855 -2.7656 2.2261 2.2261 44.778 0.0 0.0 0.0 0.0 8.143587303583693 0.0 0.0 0 0.0 0.0 0.0 0.5189301784845296 [PS]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}AADNK 2.2261 - 165 + 1 3.348 48633.7 1.0 324 3007 3332 HBL1_DMSO_200M_050219_2,3333 HBL1_DMSO_200M_050219_2,3333,TGTAVQLSWEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3336 14.928 800.0 58158.0 25 0 3402.2 -1 RECKLRASGQ 10 80 602.812084530627 1203.609616128054 2 602.8123046755791 MULTI CID FTMS 0 0 0 3335 63922.56640625 0.5204899511920312 -5 0.0233068466186523 1 Carbamidomethyl (C) _REC(Carbamidomethyl (C))KLRASGQ_ ENSG00000163961|ENST00000318037|RNF168 15.248480904072842 0.5916873121453583 4 {[SA]|[TG]}TADK{I|L}AADNK 12 -1 + 104.43 0.0 0.0 8.6762 8.6762 91.797 0.0 0.0 0.0 85.57064818426568 17.280830034908774 17.280830034908774 9.098233696509112 0 2.1989700043360187 0.8538719643217619 0.0 1.0356668758921828 {[SA]|[TG]}TADK{I|L}AADNK;{[SA]|[TG]}TADK{I|L}AADGGK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WQ]{I|L}AADNK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADRRADNK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK[RV]DNK;{[SA]|[TG]}{[WT]|[RM]}RRADNK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WQ]{I|L}AADGGK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADRRADGGK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK[RV]DGGK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WQ][RV]DNK 8.6762;7.9203;5.2327;4.8539;4.7548;4.7335;4.4713;4.0924;3.9933;2.8015 -;-;-;-;-;-;-;-;-;- 380 + 1 3.348 39970.0 0.4600000083446502 325 3009 3335 HBL1_DMSO_200M_050219_2,3336 HBL1_DMSO_200M_050219_2,3336,RECKLRASGQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3338 14.946 800.0 160210.0 25 0 47790.0 + 36492 TADPRSREV 9 86 515.7670531145988 1029.5195532959974 2 515.7678710818291 MULTI CID FTMS 0 0 0 3337 123428.0703125 0.5436712519778413 12 -0.0718851089477539 1 Unmodified _TADPRSREV_ ENSG00000132361|ENST00000651024|CLUH 10.073929032068715 0.563993802247229 4 {[WT]|[RM]}V 3 7 10.458 0.0 0.0 1.0158 0.0 0.0 0.0 640.3176455199739 640.3176455199739 0.2765140423345276 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[WT]|[RM]}V 1.0158 - 38 + 1 3.348 100773.6 0.5799999833106995 326 3010 3337 HBL1_DMSO_200M_050219_2,3338 HBL1_DMSO_200M_050219_2,3338,TADPRSREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3343 14.963 72.0 923200.0 25 0 102000.0 + 28489 PTKGRADLTQ 10 74 543.7988021981774 1085.5830514631548 2 543.7990600466728 MULTI CID FTMS 0 0 0 3342 915073.0625 0.2770752852606733 -47 0.3253746032714844 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 28.49450938151212 0.328477364964909 4 TPKV[YN]GTP 9 -1 82.713 0.0 0.0 7.6192 0.0 0.0 0.0 125.07239710025624 125.07239710025624 61.74410632329284 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.805462187404089 0.4247425010840047 TPKV[YN]GTP 7.6192 - 313 + 1 3.348 58527.0 1.0 327 3014 3342 HBL1_DMSO_200M_050219_2,3343 HBL1_DMSO_200M_050219_2,3343,PTKGRADLTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3346 14.977 420.0 187560.0 25 0 30747.0 -1 TSACPTCSP 9 82 462.18307916490414 922.3516053966084 2 462.1835815310478 MULTI CID FTMS 0 0 0 3345 111938.1640625 0.5566716161245147 -27 0.2105693817138672 1 Carbamidomethyl (C) _TSAC(Carbamidomethyl (C))PTCSP_ ENST00000592915.1_1_17:42084528-42084666:+|nuORF 16.942295170755138 0.3780752226737986 4 {[MG]|[TS]}AES 5 -1 22.531 0.0 0.0 2.4428 0.0 0.0 0.0 444.1377352350219 444.1377352350219 9.035984316004216 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[MG]|[TS]}AES 2.4428 - 31 + 1 3.348 67327.6 1.0 328 3016 3345 HBL1_DMSO_200M_050219_2,3346 HBL1_DMSO_200M_050219_2,3346,TSACPTCSP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3348 14.983 172.0 374950.0 25 0 58721.0 + -1 NKVANLMK 8 74 467.2628422123384 932.5111314914768 2 467.2629882693291 MULTI CID FTMS 0 0 0 3347 367801.625 0.6759530933263251 24 -0.1520805358886718 1 Oxidation (M) _NKVANLM(Oxidation (M))K_ REV__ENSG00000254685|ENST00000370898|FPGT;REV__nc|ENSG00000254685|O14772-2|FPGT;REV__nc|ENSG00000254685|O14772|FPGT 21.74664581756881 0.5868176546531598 4 KT{I|L}P[WP]K 7 -1 44.486 0.0 0.0 4.7706 0.0 0.0 63.99773673175179 0.0 63.99773673175179 0.0 33.6890321533884 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.3054621874040891 KT{I|L}P[WP]K 4.7706 - 86 + 1 3.348 56013.8 1.0 329 3017 3347 HBL1_DMSO_200M_050219_2,3348 HBL1_DMSO_200M_050219_2,3348,NKVANLMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3351 14.992 169.0 255400.0 25 0 21845.0 + + -1 SQGFSHSQM 9 90 513.2029212669646 1024.3912896007291 2 513.2032958865166 MULTI CID FTMS 0 0 0 3350 545875.875 1.0 0 0.0 1 Oxidation (M) _GASEGWGTNM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16 27.628801355627647 0.3479284626772844 4 {[QS]|[NT]}HYETN{M(Oxidation (M))|F} 8 -1 + 47.969 0.0 0.0 4.6827 4.6827 69.23 0.0 0.0 0.0 10.980467100700672 9.035984316004216 9.035984316004216 1.4806253545543768 0 1.1989700043360187 0.0 1.3522338482433751 0.2614393726401688 {[QS]|[NT]}HYETN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}ETN{M(Oxidation (M))|F};{[QS]|[NT]}HYQTD{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTD{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}ETN{M(Oxidation (M))|F};[HS]QYETN{M(Oxidation (M))|F};{[QS]|[NT]}HY[AG]TD{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TD{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}QTD{M(Oxidation (M))|F};[HS]QYQTD{M(Oxidation (M))|F} 4.6827;4.5382;3.8006;3.6561;3.6108;3.2574;2.8965;2.7572;2.7287;2.3753 -;-;-;-;-;-;-;-;-;- 393 1 3.348 41830.4 1.0 330 3019 3350 HBL1_DMSO_200M_050219_2,3351 HBL1_DMSO_200M_050219_2,3351,GASEGWGTNM False False SQGFSHSQM 14.992429 513.203295886517 0.0 3350.0 ENSG00000181143|ENST00000397910|MUC16 -0.4513897697130839 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3355 15.008 296.0 325000.0 25 0 95657.0 + 22826 LRNVSTGD 8 78 431.2256985864372 0 430.8883544802666 PEAK CID FTMS 0 0 0 3354 57539.703125 0.722708514539968 1 -0.0120134353637695 1 Unmodified _LRNVSTGD_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 34.40172386719151 0.1907325408143214 4 GTSV 4 7 31.241 0.0 0.0 3.6308 0.0 0.0 133.03420859689942 380.2092237904437 513.2434323873431 0.0 0.0 0.0 0.0 0 0.6203715150305281 0.0 0.7614393726401688 0.0 GTSV 3.6308 - 19 + 1 3.348 82020.6 1.0 331 3022 3354 HBL1_DMSO_200M_050219_2,3355 HBL1_DMSO_200M_050219_2,3355,LRNVSTGD False True LRNVSTGD 15.00822 430.888354480267 487749.59375 3354.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 2.218331257502238 2.0 True 8.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 3356 15.012 214.0 388120.0 25 0 73672.0 -1 0 104 344.1801338538427 343.1728573872427 1 344.1807128787041 MULTI CID FTMS 0 0 0 3354 246249.796875 0.3448762895342127 24 -0.1607065200805664 2 4 [EP]V 3 -1 + 33.468 0.0 0.0 9.7525 9.7525 92.391 0.0 0.0 0.0 2.955066025732613 8.686945718743928 2.955066025732613 8.686945718743928 0 0.0 1.3010299956639813 0.0 0.0 [EP]V;{I|L}DP;[{I|L}P]D;{NN|[MP]|[D{I|L}]|[EV]}P 9.7525;7.2211;4.9407;4.3158 -;-;-;- 30 1 3.348 70703.0 1.0 332 3022 3354 HBL1_DMSO_200M_050219_2,3356 HBL1_DMSO_200M_050219_2,3356, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3358 15.022 337.0 150360.0 25 0 8327.7 + 38075 TPHPEPATPVV 11 97 382.20357719171 1143.58890217533 3 382.2036620974541 MULTI CID FTMS 0 0 0 3357 133225.03125 0.3861241511307252 15 -0.0784311294555664 1 Unmodified _TPHPEPATPVV_ REV__ENSG00000137337|ENST00000376406|MDC1;REV__nc|ENSG00000137337|Q14676-2|MDC1;REV__nc|ENSG00000137337|Q14676-3|MDC1 24.020572477871973 0.5281922720044371 4 E{[QG]|[NA]}SV 5 -1 36.382 0.0 0.0 3.1814 0.0 0.0 625.3353138654312 0.0 625.3353138654312 0.0 15.84907055313667 0.0 0.0 0 0.7614393726401688 0.0 0.805462187404089 0.0 E{[QG]|[NA]}SV 3.1814 - 176 1 3.348 46749.7 1.0 333 3023 3357 HBL1_DMSO_200M_050219_2,3358 HBL1_DMSO_200M_050219_2,3358,TPHPEPATPVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3366 15.051 8.9 4208200.0 25 0 223870.0 38125 TPLYFFISV 9 77 362.86840965139663 1085.58339955439 3 362.8683044314384 MULTI CID FTMS 0 0 0 3365 5446559.0 0.4344614798013296 -31 0.2157745361328125 1 Unmodified _TPLYFFISV_ ENSG00000180433|ENST00000641861|OR6K6;nc|ENSG00000180433|Q8NGW6|OR6K6 21.74664581756881 0.2544899275067181 4 [TP]KGS[SG]R[TP]V 11 8 + 42.757 0.0 0.0 3.9386 3.9386 79.318 0.0 0.0 0.0 3.877820076658871 28.064116902833867 3.877820076658871 11.7609125905568 0 1.0 1.3979400086720375 0.805462187404089 0.3054621874040891 [TP]KGS[SG]R[TP]V;[KP]TGS[SG]R[TP]V 3.9386;2.8552 -;- 503 1 3.348 42282.7 1.0 334 3030 3365 HBL1_DMSO_200M_050219_2,3366 HBL1_DMSO_200M_050219_2,3366,TPLYFFISV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3370 15.075 800.0 136510.0 25 0 12323.0 + 13118 DAAEAGHQV 9 127 449.6979371976209 897.3813214620418 2 449.6972228884697 MULTI CID FTMS 0 0 0 3369 99213.7265625 0.5366654904504626 31 -0.3057985305786133 1 Unmodified _HETPAQES_ ENST00000561710.1_1_16:2034437-2034764:+|nuORF 19.438996006549623 0.6237395211498085 4 {[DA]|[EG]}AHEE{[QV]|[N{I|L}]|[RA]|[KV]} 8 7 + 24.425 0.0 0.0 2.7218 2.7218 62.638 0.0 0.0 0.0 1.0561658596561188 1.0561658596561188 1.0561658596561188 1.0561658596561188 0 0.1989700043360188 1.6989700043360187 0.8033121444636098 0.0 {[DA]|[EG]}AHEE{[QV]|[N{I|L}]|[RA]|[KV]};{[ES]|[DT]|[{I|L}C]}VQ[WY]S;{[DA]|[EG]}AH{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]};{[DA]|[EG]}[RP]AE[HC];{[DA]|[EG]}A[RP]E[HC];{[DA]|[EG]}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{[QS]|[NT]};{[YC]|[HE]}QEE{[QV]|[N{I|L}]|[RA]|[KV]};[HT]S[HC]S{[QV]|[N{I|L}]|[RA]|[KV]};{[SA]|[TG]}[MT]{[{M(Oxidation (M))|F}D]|MM}{[QV]|[N{I|L}]|[RA]|[KV]};{[YC]|[HE]}Q[NG]S{[QV]|[N{I|L}]|[RA]|[KV]} 2.7218;2.6041;2.0602;1.4646;1.4646;1.292;0.99376;0.99324;0.98021;0.92914 -;-;-;-;-;-;-;-;-;- 834 1 3.348 89518.8 0.4799999892711639 335 3033 3369 HBL1_DMSO_200M_050219_2,3370 HBL1_DMSO_200M_050219_2,3370,HETPAQES False True DAAEAGHQV 15.07501 449.69722288847 600064.25 3369.0 ENST00000561710.1_1_16:2034437-2034764:+|nuORF 6.618609110514323 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3377 15.111 800.0 112500.0 25 0 5455.5 + 7468 EGQQEKWWS 9 103 589.2652258719131 1176.515898810626 2 589.2657348513603 MULTI CID FTMS 0 0 0 3376 121276.640625 0.7123401888663476 7 -0.0662851333618164 1 Unmodified _EGQQEKWWS_ LTR2C_dup54|chr2:231400712-231401206:+|1.0484764819261394|0.310476164059117|1.76|48.0|26|1|anti-sense 34.40172386719151 0.1061884637610825 4 [AG]DAQ{M(Oxidation (M))|F}GAQQD 11 9 71.456 0.0 0.0 6.0736 0.0 0.0 0.0 85.03799206197928 85.03799206197928 54.03374807255972 0.0 0.0 0.0 0 1.674742501084005 2.0 0.9247425010840048 0.7134679910804405 [AG]DAQ{M(Oxidation (M))|F}GAQQD 6.0736 - 3508 1 3.348 69856.7 0.5099999904632568 336 3039 3376 HBL1_DMSO_200M_050219_2,3377 HBL1_DMSO_200M_050219_2,3377,EGQQEKWWS True False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 3378 15.125 800.0 94890.0 25 0 5658.3 + -1 NVLMVEPV 8 123 458.74574123665735 915.4769295401148 2 458.7460204958916 MULTI CID FTMS 0 0 0 3376 96786.234375 0.3938218172027184 -21 0.1121101379394531 2 Oxidation (M) _NVLM(Oxidation (M))VEPV_ REV__ENST00000381477.7_1_9:5908925-5909063:+|nuORF 18.13498045792455 0.6430038125133779 4 RGP[QT][TA]SV 9 -1 + 33.539 0.0 0.0 3.6635 3.6635 72.296 0.0 0.0 0.0 23.15996742094641 1.9188552623891368 1.9188552623891368 5.602554773050969 0 0.8550541008457975 0.0 0.2134679910804404 0.0 RGP[QT][TA]SV;RGP[QT]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;RG[YV][WH]V;R[YR][WH]V;RGP[KS]{[ET]|[MV]}AA 3.6635;3.0515;2.5937;1.548;0.75018 -;-;-;-;- 126 + 1 3.348 63345.3 0.5099999904632568 337 3039 3376 HBL1_DMSO_200M_050219_2,3378 HBL1_DMSO_200M_050219_2,3378,NVLMVEPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3385 15.161 800.0 172940.0 25 0 18158.0 + 41360 VPKAQKETV 9 164 333.8663404649495 998.5771919950485 3 333.8659545779228 MULTI CID FTMS 0 0 0 3384 86917.046875 0.2383999938971697 -15 0.0985546112060546 1 Unmodified _VPKAQKETV_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 11.494710602746466 0.5255349189887087 4 VPK 3 6 34.546 0.0 0.0 3.4595 0.0 0.0 0.0 671.3375877748718 671.3375877748718 14.6754801736908 0.0 0.0 0.0 0 0.3261295808774506 0.5086383061657274 0.0 0.0 + VPK 3.4595 + + 215 + 1 3.348 111954.2 0.4699999988079071 338 3045 3384 HBL1_DMSO_200M_050219_2,3385 HBL1_DMSO_200M_050219_2,3385,VPKAQKETV False True VPKAQKETV 15.160967 333.865954577923 3611293.6875 3384.0 nc|ENSG00000159023|P11171-5|EPB41;;nc|ENSG00000159023|P11171-2|EPB41;;ENSG00000159023|ENST00000343067|EPB41;;nc|ENSG00000159023|P11171-3|EPB41;;nc|ENSG00000159023|P11171-4|EPB41;;nc|ENSG00000159023|P11171-6|EPB41;;nc|ENSG00000159023|P11171-7|EPB41 5.963215510050456 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3394 15.193 11.0 3943900.0 25 0 205470.0 2859 AVDKDNKFF 9 88 361.85271536060816 1082.5363166820246 3 361.8525573611259 MULTI CID FTMS 0 0 0 3393 110499.390625 0.7808779470658559 3 -0.024876594543457 1 Unmodified _AVDKDNKFF_ ENSG00000261150|ENST00000615648|EPPK1 10.823927491677226 0.5436922275383211 4 [TP]K[DN]SK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 9 4 + 23.635 0.0 0.0 2.1833 2.1833 62.852 0.0 0.0 0.0 1.5490195998574308 4.762036441594194 1.5490195998574308 1.5490195998574308 0 0.0 1.3010299956639813 0.8494850021680094 0.0 [TP]K[DN]SK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[KP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ASK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[TP]KC(Carbamidomethyl (C))KR{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[KP]T[DN]SK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[TP]K[SG][DG]K{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[KP]TC(Carbamidomethyl (C))KR{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[WH]{[{M(Oxidation (M))|F}H]|[RQ]}[RD]SV;[KG]WSRR{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[KP]T[SG][DG]K{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[VA]|[{I|L}G]}[VG][DN]SK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 2.1833;2.0402;1.6585;1.4841;0.99277;0.95925;0.89288;0.42375;0.29352;0.26585 -;-;-;-;-;-;-;-;-;- 185 1 3.348 49047.9 1.0 339 3053 3393 HBL1_DMSO_200M_050219_2,3394 HBL1_DMSO_200M_050219_2,3394,AVDKDNKFF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3397 15.214 800.0 270460.0 25 0 41811.0 + 16324 IYGPHTHRP 9 140 359.85901996070726 1076.5552304823218 3 359.8589660525322 MULTI CID FTMS 0 0 0 3396 87614.671875 0.6731042852435579 -2 0.0086336135864257 1 Unmodified _IYGPHTHRP_ REV__ENST00000558388.6_1_15:31515486-31523017:-|nuORF 34.10243960390752 0.1078313939113124 4 {I|L}YM{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}PR 9 -1 + 65.275 0.0 0.0 6.0633 6.0633 73.215 0.0 0.0 0.0 33.03248296405036 5.269250191953674 5.269250191953674 0.5237875363565792 0 0.2887254899964357 1.6989700043360187 0.4247425010840047 0.8296896906561031 {I|L}YM{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}PR;{I|L}YTEE{[VA]|[{I|L}G]}PR;{I|L}YM{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}RP;{I|L}YT[PG]HHPR;{I|L}YTEE{[VA]|[{I|L}G]}RP;{I|L}YM{NN|[MP]|[D{I|L}]|[EV]}[PG]{I|L}R;{I|L}YTEE[PG]{I|L}R;{I|L}YT[PG]HHRP;{I|L}YT[PG]EE{I|L}R;{I|L}YM{NN|[MP]|[D{I|L}]|[EV]}[RP]G{I|L} 6.0633;6.0146;5.5738;5.5714;5.5252;5.2203;5.1716;5.082;4.7285;4.6895 -;-;-;-;-;-;-;-;-;- 369 + 1 3.348 173170.8 0.5699999928474426 340 3055 3396 HBL1_DMSO_200M_050219_2,3397 HBL1_DMSO_200M_050219_2,3397,IYGPHTHRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3399 15.218 22.0 2846000.0 25 0 312880.0 + 28490 PTKGRADLTQ 10 61 543.7988021981774 1085.5830514631548 2 543.7990600466728 MULTI CID FTMS 0 0 0 3398 2885883.0 0.873817499631542 -5 0.0327425003051757 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 28.49450938151212 0.328477364964909 4 TPKG[YR]GTP 9 -1 80.411 0.0 0.0 7.4072 0.0 0.0 0.0 125.0724581354125 125.0724581354125 59.4420594384119 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.7742275032520141 0.4247425010840047 TPKG[YR]GTP 7.4072 - 207 + 1 3.348 50730.2 1.0 341 3056 3398 HBL1_DMSO_200M_050219_2,3399 HBL1_DMSO_200M_050219_2,3399,PTKGRADLTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3400 15.233 800.0 177060.0 25 0 12074.0 -1 RVPSLQRTM 9 147 368.5375323540189 1102.590767662257 3 368.5376464724541 MULTI CID FTMS 0 0 0 3398 95748.8984375 0.3059958040941191 -6 0.0367231369018554 2 Oxidation (M) _RVPSLQRTM(Oxidation (M))_ ENSG00000175193|ENST00000317096|PARL;nc|ENSG00000175193|Q9H300-2|PARL 12.872603262515298 0.4882369880199512 4 RT{M(Oxidation (M))|F} 3 -1 31.471 0.0 0.0 2.8543 0.0 0.0 680.401170799025 0.0 680.401170799025 0.0 18.99674684468792 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 RT{M(Oxidation (M))|F} 2.8543 + + 72 1 3.348 118268.1 0.9100000262260436 342 3056 3398 HBL1_DMSO_200M_050219_2,3400 HBL1_DMSO_200M_050219_2,3400,RVPSLQRTM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3402 15.243 459.0 175980.0 25 0 27390.0 + -1 TPLTRAMK 8 92 467.2628422123384 932.5111314914768 2 467.2628661990166 MULTI CID FTMS 0 0 0 3401 198420.34375 0.3646608280664482 64 -0.5341129302978516 1 Oxidation (M) _TPLTRAM(Oxidation (M))K_ REV__ENSG00000155719|ENST00000646100|OTOA;REV__ENST00000563506.1_1_16:21742071-21771858:+|nuORF;REV__nc|ENSG00000155719|Q7RTW8-2|OTOA;REV__nc|ENSG00000155719|Q7RTW8-3|OTOA;REV__nc|ENSG00000155719|Q7RTW8-4|OTOA;REV__nc|ENSG00000155719|Q7RTW8|OTOA 15.847184025352805 0.6768015514314958 4 T[{I|L}P]{M(Oxidation (M))|F}K 5 -1 32.542 0.0 0.0 3.4897 0.0 0.0 328.184373924025 0.0 328.184373924025 0.0 14.00257441210926 0.0 0.0 0 0.7614393726401688 0.0 0.6203715150305281 0.0 T[{I|L}P]{M(Oxidation (M))|F}K 3.4897 - 104 1 3.348 72935.7 1.0 343 3057 3401 HBL1_DMSO_200M_050219_2,3402 HBL1_DMSO_200M_050219_2,3402,TPLTRAMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3403 15.249 350.0 247750.0 25 0 14616.0 + 3932 DALKNHRTV 9 104 351.8649721541272 1052.5730870625816 3 351.8649780154228 MULTI CID FTMS 0 0 0 3401 185533.203125 0.2088608153795366 -9 0.0634546279907226 2 Unmodified _DALKNHRTV_ ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 40.23920728925047 0.0741434193262949 4 DA{I|L}KNS 6 4 74.558 0.0 0.0 7.0834 0.0 0.0 0.0 421.2285250299438 421.2285250299438 61.37009080640347 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 1.2302046884880935 DA{I|L}KNS 7.0834 - 108 + 1 3.348 77267.7 1.0 344 3057 3401 HBL1_DMSO_200M_050219_2,3403 HBL1_DMSO_200M_050219_2,3403,DALKNHRTV True True DALKNHRTV 15.249379 351.864978015423 8551916.625 3401.0 ENSG00000187240|ENST00000375735|DYNC2H1;;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 6.727814674377441 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3404 15.263 800.0 152700.0 25 0 25763.0 -1 LGPTRGRVTM 10 90 552.3028366770658 1102.5911204209317 2 552.3030273318291 MULTI CID FTMS 0 0 0 3401 121234.5859375 0.4872234827872073 -7 0.055586814880371 3 Oxidation (M) _LGPTRGRVTM(Oxidation (M))_ ENST00000606975.1_1_8:163470-182153:-|nuORF 17.11289562659939 0.5604042439455784 4 VT{M(Oxidation (M))|F} 3 -1 31.069 0.0 0.0 2.8178 0.0 0.0 737.4319845340159 0.0 737.4319845340159 0.0 20.61108107278209 0.0 0.0 0 0.8494850021680094 0.0 0.2396518287104437 0.0 VT{M(Oxidation (M))|F} 2.8178 + + 51 + 1 3.348 98217.6 0.4900000095367431 345 3057 3401 HBL1_DMSO_200M_050219_2,3404 HBL1_DMSO_200M_050219_2,3404,LGPTRGRVTM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3407 15.283 800.0 262650.0 25 0 24555.0 + -1 DMLNMVLDL 9 170 360.509847440586 1078.507712921958 3 360.5099670290947 MULTI CID FTMS 0 0 0 3406 78242.4765625 0.5137898848766057 -5 0.0736503601074218 1 Oxidation (M) _DMLNM(Oxidation (M))VLDL_ REV__ENSG00000127603|ENST00000564288|MACF1;REV__nc|ENSG00000127603|O94854|MACF1;REV__nc|ENSG00000127603|Q9UPN3-2|MACF1;REV__nc|ENSG00000127603|Q9UPN3-3|MACF1;REV__nc|ENSG00000127603|Q9UPN3-4|MACF1;REV__nc|ENSG00000127603|Q9UPN3-5|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1 8.155526934196011 0.6299788542272896 4 NM 2 -1 20.969 0.0 0.0 1.9443 0.0 0.0 0.0 830.4109290751812 830.4109290751812 1.1240816261751905 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NM 1.9443 + + 262 + 1 3.331 164909.8 0.5699999928474426 346 3059 3406 HBL1_DMSO_200M_050219_2,3407 HBL1_DMSO_200M_050219_2,3407,DMLNMVLDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3410 15.303 800.0 141910.0 25 0 14909.0 + 34047 SLLDELAFV 9 120 503.7757049479956 0 503.7754394412041 PEAK CID FTMS 0 0 0 3409 114237.5234375 1.0 0 0.0 1 Unmodified _SLLDELAFV_ ENSG00000148798|ENST00000369849|INA 42.09456458481378 0.053291022336892 4 T{I|L}DG[C(Carbamidomethyl (C))R]T 7 7 30.97 0.0 0.0 3.0799 0.0 0.0 117.07675327937166 82.06694971256093 199.14370299193257 0.0 0.0 0.0 0.0 0 0.1923877696554315 0.0 0.7614393726401688 0.7742275032520141 T{I|L}DG[C(Carbamidomethyl (C))R]T 3.0799 - 455 + 1 3.331 93057.3 0.5600000023841858 347 3061 3409 HBL1_DMSO_200M_050219_2,3410 HBL1_DMSO_200M_050219_2,3410,SLLDELAFV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3411 15.317 800.0 92646.0 25 0 7905.5 + 41361 VPKAQKETV 9 100 500.2955453566374 998.5765377800748 2 500.2955505251884 MULTI CID FTMS 0 0 0 3409 127657.2734375 1.0 0 0.0 2 Unmodified _VPKAQKETV_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 28.49450938151212 0.1686335738423394 4 VPKAQ 5 4 50.283 0.0 0.0 5.0355 0.0 0.0 0.0 472.2421358697876 472.2421358697876 33.29333002237205 0.0 0.0 0.0 0 0.4876954943324545 1.5228787452803376 0.0 0.0 + VPKAQ 5.0355 + + 111 + 1 3.331 62846.3 0.6200000047683716 348 3061 3409 HBL1_DMSO_200M_050219_2,3411 HBL1_DMSO_200M_050219_2,3411,VPKAQKETV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3412 15.331 800.0 168290.0 25 0 21235.0 19912 LHWLEEAEK 9 141 385.531702211757 1153.573277235471 3 385.5311462283134 MULTI CID FTMS 0 0 0 3409 82734.4140625 0.9781981082082422 -3 0.0240058898925781 3 Unmodified _LHWLEEAEK_ ENSG00000165914|ENST00000328459|TTC7B;nc|ENSG00000165914|Q86TV6-2|TTC7B 13.042465956692816 0.4836390050082244 4 [VS]AQ{M(Oxidation (M))|F}VAH 8 8 41.049 0.0 0.0 3.5585 0.0 0.0 0.0 311.1322639522103 311.1322639522103 24.94009708316895 0.0 0.0 0.0 0 0.218765315847925 2.0 0.4247425010840047 0.0 [VS]AQ{M(Oxidation (M))|F}VAH 3.5585 - 265 1 3.331 111706.9 0.5099999904632568 349 3061 3409 HBL1_DMSO_200M_050219_2,3412 HBL1_DMSO_200M_050219_2,3412,LHWLEEAEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3414 15.336 4.4 8673300.0 25 0 487690.0 38126 TPLYFFISV 9 77 362.86840965139663 1085.58339955439 3 362.8684265017509 MULTI CID FTMS 0 0 0 3413 12046282.0 0.96090862209041 1 -0.0296201705932617 1 Unmodified _TPLYFFISV_ ENSG00000180433|ENST00000641861|OR6K6;nc|ENSG00000180433|Q8NGW6|OR6K6 21.74664581756881 0.2544899275067181 4 SV 2 7 33.104 0.0 0.0 3.0494 0.0 0.0 881.4738129437567 0.0 881.4738129437567 0.0 18.300419693330007 0.0 0.0 0 0.7887254899964358 0.0 0.4247425010840047 0.0 + SV 3.0494 + + 137 1 3.331 40340.2 1.0 350 3062 3413 HBL1_DMSO_200M_050219_2,3414 HBL1_DMSO_200M_050219_2,3414,TPLYFFISV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3415 15.347 617.0 126190.0 25 0 13246.0 + 3934 DALKNHRTV 9 84 527.293570877597 1052.5725888219938 2 527.2942993044853 MULTI CID FTMS 0 0 0 3413 131604.09375 0.8324673105344302 -7 0.133641242980957 2 Unmodified _DALKNHRTV_ ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 33.4449034751529 0.1114409586740657 4 DA{I|L}KNH 6 3 72.868 0.0 0.0 6.9229 0.0 0.0 0.0 371.20527063541255 371.20527063541255 61.89896278884483 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.8494850021680094 + DA{I|L}KNH 6.9229 + + 102 + 1 3.331 68638.5 1.0 351 3062 3413 HBL1_DMSO_200M_050219_2,3415 HBL1_DMSO_200M_050219_2,3415,DALKNHRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3416 15.361 800.0 101940.0 25 0 4888.8 + 35556 STQMTITTQK 10 112 577.7895763816894 1153.5645998301786 2 577.7910034060478 MULTI CID FTMS 0 0 0 3413 100625.9375 0.126504585159186 -57 0.4381999969482422 3 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 81.9152076656658 0.0154982280583276 4 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 80.187 0.0 0.0 6.9513 6.9513 88.575 0.0 0.0 0.0 61.90883938695259 16.448565749036064 16.448565749036064 9.164539485499262 0 0.9916440611282626 0.0 0.8807196863200843 1.1109243748081783 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}QTD[{M(Oxidation (M))|F}V]TQK;[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}T{I|L}[YV]VP;[WQ]{[{M(Oxidation (M))|F}D]|MM}[R{M(Oxidation (M))|F}]QK;[WQ]H{[QV]|[N{I|L}]|[RA]|[KV]}{[MS]|[{M(Oxidation (M))|F}A]}AAP 6.9513;6.1568;6.1568;5.3655;4.4203;3.629;3.4909;2.6195;1.4023;0.47242 +;-;-;-;-;-;-;-;-;- + 635 + 1 3.331 68595.3 0.4300000071525574 352 3062 3413 HBL1_DMSO_200M_050219_2,3416 HBL1_DMSO_200M_050219_2,3416,STQMTITTQK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3419 15.374 373.0 159130.0 25 0 12943.0 12500 GVDMLVPSV 9 91 458.74574123665735 915.4769295401148 2 458.7459289431572 MULTI CID FTMS 0 0 0 3418 185389.90625 0.7543489034559995 4 -0.0346145629882812 1 Unmodified _GVDMLVPSV_ ENSG00000096696|ENST00000379802|DSP;nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP 23.1484247019978 0.2366544122328345 4 VGGP[KS]WSV 9 7 + 85.285 0.0 0.0 9.3159 9.3159 97.077 0.0 0.0 0.0 78.2066729533658 14.973024840566469 14.973024840566469 19.075221787320515 0 1.066901560044258 2.0 0.6022338482433752 0.0 VGGP[KS]WSV;VNP[KS]WSV;VG[YR][WH]V;RG[YV][WH]V 9.3159;7.2323;4.9227;3.1539 -;-;-;- 104 + 1 3.315 50820.4 1.0 353 3064 3418 HBL1_DMSO_200M_050219_2,3419 HBL1_DMSO_200M_050219_2,3419,GVDMLVPSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3420 15.388 800.0 108910.0 25 0 12117.0 + 29279 QIEHEVSSS 9 116 508.23801902586985 1014.4614851185396 2 508.2380248904228 MULTI CID FTMS 0 0 0 3418 100142.625 0.6838605413305896 -5 0.0974435806274414 2 Unmodified _QIEHEVSSS_ CON__P35527;ENSG00000171403|ENST00000246662|KRT9 78.14939416004806 0.0179651292570206 4 SVE[{I|L}P]SSS 8 5 42.969 0.0 0.0 4.2356 0.0 0.0 210.0855278037223 0.0 210.0855278037223 0.0 24.89954614917864 0.0 0.0 0 0.3807196863200844 0.0 1.4291746928241125 0.0 SVE[{I|L}P]SSS 4.2356 - 701 + 1 3.315 72416.8 0.5299999713897705 354 3064 3418 HBL1_DMSO_200M_050219_2,3420 HBL1_DMSO_200M_050219_2,3420,QIEHEVSSS True True TVHPDSVSSS 15.387512 508.238024890423 711610.6875 3418.0 nc|ENSG00000148396|O15027-2|SEC16A;;nc|ENSG00000148396|O15027-4|SEC16A;;nc|ENSG00000148396|O15027-3|SEC16A;;nc|ENSG00000148396|O15027-5|SEC16A;;ENSG00000148396|ENST00000684901|SEC16A -0.4760845998922984 2.0 False 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 3425 15.408 377.0 200600.0 25 0 25198.0 39615 VDNKKPVVT 9 105 333.8663404649495 998.5771919950485 3 333.8660766482353 MULTI CID FTMS 0 0 0 3424 121666.921875 0.3337135173748092 8 -0.0490455627441406 1 Unmodified _VDNKKPVVT_ ENSG00000150893|ENST00000280481|FREM2;nc|ENSG00000150893|Q5SZK8-2|FREM2 8.745405648335112 0.6093864874670651 4 VPK 3 7 26.198 0.0 0.0 2.6235 0.0 0.0 0.0 671.3377903202668 671.3377903202668 15.228787452803374 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VPK 2.6235 - 81 + 1 3.315 63916.7 1.0 355 3068 3424 HBL1_DMSO_200M_050219_2,3425 HBL1_DMSO_200M_050219_2,3425,VDNKKPVVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3429 15.432 800.0 124450.0 25 0 30255.0 30038 QTQCCFRV 8 103 492.7236009930767 983.4326490529534 2 492.7240173220634 MULTI CID FTMS 0 0 0 3428 74231.1796875 0.3717676013634621 -37 0.3410377502441406 1 Unmodified _QTQCCFRV_ chr6:106739770-106747214|10|13.3|0.58|4.51|-|0|LINC02532,LINC02532|1 19.438996006549623 0.6237395211498085 4 [QT]V[Q{I|L}]S 6 6 32.693 0.0 0.0 3.3244 0.0 0.0 0.0 324.0596016808153 324.0596016808153 21.09936714997401 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.6861818737241735 0.2887254899964357 [QT]V[Q{I|L}]S 3.3244 - 217 1 3.315 78977.8 0.5799999833106995 356 3071 3428 HBL1_DMSO_200M_050219_2,3429 HBL1_DMSO_200M_050219_2,3429,QTQCCFRV False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 3437 15.472 800.0 63307.0 25 0 9277.2 + -1 ISGGGSRGGGGGGY 14 86 569.7653845874822 1137.5162162417644 2 569.7653686404228 MULTI CID FTMS 0 0 0 3436 101560.859375 1.0 0 0.0 1 Oxidation (M) _LSLFYWM(Oxidation (M))Y_ P04264;ENSG00000167768|ENST00000252244|KRT1 26.34127834903884 0.4900704351052977 4 {I|L}SGG 4 -1 59.993 0.0 0.0 5.274 0.0 0.0 0.0 820.3382662408811 820.3382662408811 32.557809497117844 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {I|L}SGG 5.274 - 57 + 1 3.315 42662.5 0.4900000095367431 357 3078 3436 HBL1_DMSO_200M_050219_2,3437 HBL1_DMSO_200M_050219_2,3437,LSLFYWMY False False ISGGGSRGGGGGGY 15.472455 569.765368640423 496917.0625 3436.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 2.8831350803375244 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3439 15.477 33.0 1631500.0 25 0 183370.0 + 28491 PTKGRADLTQ 10 58 543.7988021981774 1085.5830514631548 2 543.7991210818291 MULTI CID FTMS 0 0 0 3438 1749448.75 0.529716184772053 18 -0.1003894805908203 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 17.44264345198275 0.5548713957087773 4 TPKV[YN]GTP 9 -1 74.659 0.0 0.0 6.8773 0.0 0.0 0.0 125.07248865299064 125.07248865299064 69.17403451429223 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.4247425010840047 0.0 TPKV[YN]GTP 6.8773 - 209 + 1 3.315 47100.8 1.0 358 3079 3438 HBL1_DMSO_200M_050219_2,3439 HBL1_DMSO_200M_050219_2,3439,PTKGRADLTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3440 15.487 581.0 193140.0 25 0 13268.0 -1 RTRKTPPTM 9 122 368.5375323540189 1102.590767662257 3 368.5377990603447 MULTI CID FTMS 0 0 0 3438 113967.4765625 0.3642190166196382 17 -0.0965414047241211 2 Oxidation (M) _RTRKTPPTM(Oxidation (M))_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 10.150570793230772 0.5619192000662246 4 AT{M(Oxidation (M))|F} 3 -1 30.718 0.0 0.0 2.786 0.0 0.0 765.4618687237573 0.0 765.4618687237573 0.0 19.124628150806373 0.0 0.0 0 0.8807196863200843 0.0 0.5 0.0 AT{M(Oxidation (M))|F} 2.786 - 62 1 3.315 95669.7 1.0 359 3079 3438 HBL1_DMSO_200M_050219_2,3440 HBL1_DMSO_200M_050219_2,3440,RTRKTPPTM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3443 15.497 133.0 393470.0 25 0 34145.0 + 3933 DALKNHRTV 9 81 351.8649721541272 1052.5730870625816 3 351.8647338747978 MULTI CID FTMS 0 0 0 3442 347740.21875 0.3914625759975189 15 -0.0776987075805664 1 Unmodified _DALKNHRTV_ ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 19.361941925380144 0.3125782356748823 4 {[DA]|[EG]}{I|L}KNH 6 3 54.526 0.0 0.0 5.1802 0.0 0.0 0.0 371.2050264947876 371.2050264947876 44.69273760456403 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + {[DA]|[EG]}{I|L}KNH 5.1802 + + 58 + 1 3.315 53036.3 1.0 360 3081 3442 HBL1_DMSO_200M_050219_2,3443 HBL1_DMSO_200M_050219_2,3443,DALKNHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3455 15.543 227.0 379500.0 25 0 82242.0 -1 0 89 364.1893971442405 363.1821206776405 1 364.1893188357353 MULTI CID FTMS 0 0 0 3454 219156.015625 0.7925548920850545 -17 0.0922374725341796 1 4 [TP]{M(Oxidation (M))|F} 3 -1 + 18.416 0.0 0.0 5.0708 5.0708 85.165 0.0 0.0 0.0 4.921525057367408 9.719712763997563 4.921525057367408 18.4163750790475 0 0.0 0.7958800173440752 0.0 0.0 [TP]{M(Oxidation (M))|F} 5.0708 - 12 1 3.315 74528.0 1.0 361 3092 3454 HBL1_DMSO_200M_050219_2,3455 HBL1_DMSO_200M_050219_2,3455, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3456 15.557 800.0 49081.0 25 0 3580.9 + 8202 EPSPSLIQSAN 11 51 571.7878324001408 1141.5611118670815 2 571.7879516482353 MULTI CID FTMS 0 0 0 3454 70174.203125 0.4100214836460629 -26 0.1451663970947265 2 Unmodified _EPSPSLIQSAN_ REV__ENSG00000156509|ENST00000428847|FBXO43;REV__ENST00000520987.1_1_8:101149771-101157363:-|nuORF 40.23920728925047 0.2087110615831976 4 QSAN 4 -1 53.488 0.0 0.0 4.6855 0.0 0.0 723.3803055503993 0.0 723.3803055503993 0.0 41.80523450795789 0.0 0.0 0 1.0 0.0 0.805462187404089 0.3494850021680094 QSAN 4.6855 + + 38 1 3.315 42947.7 0.4099999964237213 362 3092 3454 HBL1_DMSO_200M_050219_2,3456 HBL1_DMSO_200M_050219_2,3456,EPSPSLIQSAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3465 15.59 18.0 2256900.0 25 0 182100.0 38127 TPLYFFISV 9 85 362.86840965139663 1085.58339955439 3 362.8681823611259 MULTI CID FTMS 0 0 0 3464 2486325.75 0.1983293974439918 39 -0.3430852890014648 1 Unmodified _TPLYFFISV_ ENSG00000180433|ENST00000641861|OR6K6;nc|ENSG00000180433|Q8NGW6|OR6K6 26.88365393820708 0.1891292719743517 4 SV 2 7 31.454 0.0 0.0 2.8974 0.0 0.0 881.470966270807 0.0 881.470966270807 0.0 6.391981519752221 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 + SV 2.8974 + + 183 1 3.315 44357.7 1.0 363 3100 3464 HBL1_DMSO_200M_050219_2,3465 HBL1_DMSO_200M_050219_2,3465,TPLYFFISV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3468 15.598 34.0 1311900.0 25 0 100370.0 + 42287 VSRPQPGEDV 10 89 361.8524966053639 0 361.8523132205009 PEAK CID FTMS 0 0 0 3467 120206.4921875 0.7461232355838733 -9 0.0366334915161132 1 Unmodified _VSRPQPGEDV_ REV__ENSG00000060491|ENST00000290291|OGFR;REV__nc|ENSG00000060491|Q9NZT2-2|OGFR 10.823927491677226 0.3685635357628707 4 S 1 -1 5.8412 0.0 0.0 0.80938 0.0 0.0 517.5796900107293 114.056466924475 631.6361569352043 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 S 0.80938 + + 32 + 1 3.315 45783.6 1.0 364 3102 3467 HBL1_DMSO_200M_050219_2,3468 HBL1_DMSO_200M_050219_2,3468,VSRPQPGEDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3470 15.603 106.0 373310.0 25 0 22475.0 + 35557 STQMTITTQK 10 77 577.7895763816894 1153.5645998301786 2 577.7900878787041 MULTI CID FTMS 0 0 0 3469 522455.15625 0.656818455039825 -16 0.0819330215454101 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 69.33821966488729 0.0189579340102328 4 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 75.129 0.0 0.0 6.5127 6.5127 86.767 0.0 0.0 0.0 58.70207878646277 13.56402858817475 13.56402858817475 9.164539485499247 0 0.6989700043360187 0.0 0.9247425010840048 1.0297966019298022 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA 6.5127;5.7183;5.7183;4.927;4.5913;3.7999 +;-;-;-;-;- + 207 + 1 3.315 33494.0 1.0 365 3103 3469 HBL1_DMSO_200M_050219_2,3470 HBL1_DMSO_200M_050219_2,3470,STQMTITTQK True False STQMTITTQK 15.603148 577.790087878704 21851031.0 3469.0 ENSG00000181143|ENST00000397910|MUC16 10.472984313964844 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3481 15.656 800.0 142440.0 25 0 13457.0 -1 MQARKDAAV 9 114 503.26039281383794 1004.506232694476 2 503.2614013552666 MULTI CID FTMS 0 0 0 3480 78801.796875 0.3959736012103175 -43 0.2273130416870117 1 Oxidation (M) _M(Oxidation (M))QARKDAAV_ ENST00000401088.8_1_1:16721635-16721806:+|nuORF 12.531546534597751 0.4974689918368763 4 [KQ]K[WM]ADV 8 -1 [KQ]K[WM]AD + + 12.474 -3.7679 -0.42458 1.2418 1.2418 44.272 0.0 0.0 0.0 0.0 -4.436974992327126 -4.436974992327126 0.0 0 0.0 0.0 0.0 0.0 [KQ]K[WM]ADV 1.2418 - 187 + 1 3.315 91653.9 0.4199999868869781 366 3113 3480 HBL1_DMSO_200M_050219_2,3481 HBL1_DMSO_200M_050219_2,3481,MQARKDAAV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3484 15.676 800.0 80494.0 25 0 3570.1 + 7505 EHDQPTVQNQ 10 104 598.2704564412861 1194.526359949372 2 598.2706176638603 MULTI CID FTMS 0 0 0 3483 100583.578125 0.3889996712082549 -9 0.0484819412231445 1 Unmodified _EHDQPTVQNQ_ REV__ENSG00000101811|ENST00000372972|CSTF2;REV__nc|ENSG00000101811|P33240-2|CSTF2 26.268140514670165 0.3785003716575977 4 {[QD]|[EN]|[WG]|[KD]|[RS]}HEAQ 6 -1 40.314 0.0 0.0 3.3749 0.0 0.0 0.0 483.21808354757417 483.21808354757417 8.295671638727029 0.0 0.0 0.0 0 0.0 0.0 1.2218487496163564 1.3737125054200234 {[QD]|[EN]|[WG]|[KD]|[RS]}HEAQ 3.3749 - 556 1 3.315 54074.9 0.449999988079071 367 3115 3483 HBL1_DMSO_200M_050219_2,3484 HBL1_DMSO_200M_050219_2,3484,EHDQPTVQNQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3486 15.689 533.0 190520.0 25 0 39605.0 + 30043 QTSSVNWY 8 102 492.7236009930767 983.4326490529534 2 492.7234680056572 MULTI CID FTMS 0 0 0 3485 160306.28125 0.8028524120820986 8 -0.1162128448486328 1 Unmodified _QTSSVNWY_ REV__ENSG00000215251|ENST00000380266|FASTKD5 21.74664581756881 0.5868176546531598 4 [QT]S 3 -1 31.087 0.0 0.0 3.1611 0.0 0.0 0.0 664.270911342269 664.270911342269 18.1114102025465 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.3494850021680094 0.2887254899964357 [QT]S 3.1611 + + 145 1 3.315 84698.5 1.0 368 3116 3485 HBL1_DMSO_200M_050219_2,3486 HBL1_DMSO_200M_050219_2,3486,QTSSVNWY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3487 15.698 491.0 192320.0 25 0 23284.0 + 13859 HVIEKMHHV 9 120 377.20384902905687 1128.5897176873707 3 377.2031738162041 MULTI CID FTMS 0 0 0 3485 137289.84375 0.8717618050550686 -6 0.0487985610961914 2 Unmodified _HVIEKMHHV_ ENSG00000115267|ENST00000649979|IFIH1 48.345845343767074 0.0439967357579942 4 [HV]{I|L}EKMHVH 9 2 + 64.165 0.0 0.0 5.6854 5.6854 77.423 0.0 0.0 0.0 27.147642715192504 3.521825181113627 3.521825181113627 3.521825181113627 0 1.055462187404089 2.0 0.0 0.0 [HV]{I|L}EKMHVH;[HV]{I|L}EKMHHV;[HV]{I|L}EK{[CT]|[{M(Oxidation (M))|F}G]}[NS]V;[HV]{I|L}EHH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;[HV]{I|L}E{[NV]|[RG]}[KQ]Y;[HV]{I|L}E[TA]E{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[HV]{I|L}E[TA][YT]PV;[HV]{I|L}E[TA][YT]VP 5.6854;5.3734;3.9116;3.7556;3.4888;2.6691;2.4412;2.2712 -;+;-;-;-;-;-;- + 194 + 1 3.315 82654.1 1.0 369 3116 3485 HBL1_DMSO_200M_050219_2,3487 HBL1_DMSO_200M_050219_2,3487,HVIEKMHHV True True HVIEKMHHV 15.698031 377.203173816204 1072458.5 3485.0 ENSG00000115267|ENST00000649979|IFIH1 6.937285264333089 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3490 15.719 800.0 58707.0 25 0 3093.6 + 3476 CGHNRPQSES 10 87 557.7359153614447 1113.4572777896892 2 557.7367431521416 MULTI CID FTMS 0 0 0 3489 89559.5703125 0.8886217579147402 1 -0.016427993774414 1 Unmodified _CGHNRPQSES_ REV__ENST00000469937.2_1_7:46729000-46799342:-|nuORF 34.40172386719151 0.2166836008404837 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQE[{I|L}T]SES 10 -1 + 63.65 0.0 0.0 5.7164 5.7164 75.867 0.0 0.0 0.0 42.68089865121331 18.666805048557848 18.666805048557848 2.7815125038364386 0 0.0 0.0 1.4436726795685342 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQE[{I|L}T]SES;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DQT[{I|L}T]SES;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[AG]E[{I|L}T]SES;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[AG]T[{I|L}T]SES;{[ES]|[DT]|[{I|L}C]}[YR]EQSES;{[C(Carbamidomethyl (C))G]|[NC]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T[{I|L}T]SES;[HD]YY[{I|L}T]SES;{[ES]|[DT]|[{I|L}C]}[YR]E[AG]SES;{[ES]|[DT]|[{I|L}C]}[YR]TQDES;{[ES]|[DT]|[{I|L}C]}[YK]EQDES 5.7164;5.4666;4.5514;4.3016;3.8984;3.7431;3.6205;3.0714;2.7505;2.5923 -;-;-;-;-;-;-;-;-;- 175 + 1 3.315 40736.7 0.449999988079071 370 3118 3489 HBL1_DMSO_200M_050219_2,3490 HBL1_DMSO_200M_050219_2,3490,CGHNRPQSES False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3493 15.739 800.0 118420.0 25 0 8399.4 + 36088 SVQSMKRTE 9 103 533.2700291186939 1064.5255053041876 2 533.2700073122978 MULTI CID FTMS 0 0 0 3492 96983.3984375 0.6123290292953114 -2 0.0203123092651367 1 Unmodified _SVQSMKRTE_ ENSG00000142632|ENST00000270747|ARHGEF19;ENST00000478117.5_1_1:16529010-16533481:-|nuORF 38.17557092003332 0.0854718145212029 4 SVQK{M(Oxidation (M))|F}{[CP]|[EA]}EK 9 5 + 86.882 0.0 0.0 8.1616 8.1616 87.394 0.0 0.0 0.0 34.59060619004511 13.65356566548286 13.65356566548286 5.120703440320469 0 1.610924374808178 2.0 1.4916440611282624 0.805462187404089 SVQK{M(Oxidation (M))|F}{[CP]|[EA]}EK;SVQ{[CP]|[EA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;SV[AG]K{M(Oxidation (M))|F}{[CP]|[EA]}EK;SVQHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[PA];SVQ{[CP]|[EA]}VHQ[PA];SVQHV{[CP]|[EA]}Q[PA];SVQHV{[CP]|[EA]}GA[PA];SVQ{[CP]|[EA]}VHGA[PA];SV[AG]HV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[PA];SV[AG]{[CP]|[EA]}VHQ[PA] 8.1616;7.6806;7.2966;6.7639;6.7197;6.6891;6.5758;6.2074;5.903;5.8588 -;-;-;-;-;-;-;-;-;- 2052 + 1 3.315 77498.7 0.4799999892711639 371 3120 3492 HBL1_DMSO_200M_050219_2,3493 HBL1_DMSO_200M_050219_2,3493,SVQSMKRTE True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3494 15.753 800.0 24069.0 25 0 1944.7 -1 0 41 827.6197195785091 0 827.3666259646416 PEAK CID FTMS 0 0 0 3492 34789.37890625 0.6067310288936504 2 -0.0617494583129882 2 4 AT 2 -1 19.464 0.0 0.0 1.1773 0.0 0.0 643.8133078423177 834.2983492486936 1478.1116570910112 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 AT 1.1773 - 6 + 1 3.315 26551.7 0.3700000047683716 372 3120 3492 HBL1_DMSO_200M_050219_2,3494 HBL1_DMSO_200M_050219_2,3494, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3495 15.767 800.0 99489.0 25 0 12695.0 + 11313 DAPQTRQV 8 100 457.7379422744896 913.4613316157792 2 457.7381774783134 MULTI CID FTMS 0 0 0 3492 85855.203125 0.9021029542393224 -2 0.0203123092651367 3 Unmodified _GEVTAGQRP_ ENST00000334554.11_1_22:20119331-20127004:+|nuORF 24.020572477871973 0.2255576514309169 4 {[DA]|[EG]}PQ 4 6 47.747 0.0 0.0 5.2271 0.0 0.0 0.0 499.2637785235413 499.2637785235413 29.844533785784453 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.805462187404089 {[DA]|[EG]}PQ 5.2271 - 116 + 1 3.315 66934.4 0.4199999868869781 373 3120 3492 HBL1_DMSO_200M_050219_2,3495 HBL1_DMSO_200M_050219_2,3495,GEVTAGQRP False False DAPQTRQV 15.766503 457.738177478313 546049.8125 3492.0 ENST00000334554.11_1_22:20119331-20127004:+|nuORF 5.077732960383098 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3497 15.784 800.0 76210.0 25 0 6190.0 + 28492 PTKGRADLTQ 10 75 543.7988021981774 1085.5830514631548 2 543.7988769412041 MULTI CID FTMS 0 0 0 3496 76324.1953125 0.0231102291774677 60 -0.4092559814453125 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 17.44264345198275 0.5548713957087773 4 TPKG[YR]GTP 9 -1 71.743 0.0 0.0 6.6087 0.0 0.0 0.0 125.07225977115468 125.07225977115468 69.26850591651572 0.0 0.0 0.0 0 0.5891368308784531 1.3979400086720375 0.4247425010840047 0.0 TPKG[YR]GTP 6.6087 - 101 + 1 3.315 56177.7 0.4699999988079071 374 3121 3496 HBL1_DMSO_200M_050219_2,3497 HBL1_DMSO_200M_050219_2,3497,PTKGRADLTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3501 15.809 800.0 39106.0 25 0 7269.4 -1 0 31 872.603707601757 3486.385724540628 4 872.8555786013603 MULTI CID FTMS 0 0 0 3500 76218.9921875 0.8732281071149247 -6 0.0901861190795898 1 4 G 1 -1 6.9897 0.0 0.0 0.20049 0.0 0.0 1944.6787683468567 1481.6676862262382 3426.346454573096 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20049 - 6 + 1 3.315 36146.8 0.3199999928474426 375 3124 3500 HBL1_DMSO_200M_050219_2,3501 HBL1_DMSO_200M_050219_2,3501, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3502 15.823 800.0 75083.0 25 0 16305.0 -1 CDCDDNHMC 9 71 593.1575249025293 0 593.1569702029228 PEAK CID FTMS 0 0 0 3500 112620.2421875 0.911800279472014 -2 0.0081243515014648 2 2 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))DC(Carbamidomethyl (C))DDNHM(Oxidation (M))C_ ENSG00000175065|ENST00000308128|DSG4;nc|ENSG00000175065|Q86SJ6-2|DSG4 0.0 0.3444685223463735 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.315 51319.1 0.4600000083446502 376 3124 3500 HBL1_DMSO_200M_050219_2,3502 HBL1_DMSO_200M_050219_2,3502,CDCDDNHMC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3503 15.836 800.0 40686.0 25 0 5060.2 + 8203 EPSPSLIQSAN 11 62 571.7878324001408 1141.5611118670815 2 571.7885619997978 MULTI CID FTMS 0 0 0 3500 89445.90625 0.5226242914559872 6 -0.0677900314331054 3 Unmodified _EPSPSLIQSAN_ REV__ENSG00000156509|ENST00000428847|FBXO43;REV__ENST00000520987.1_1_8:101149771-101157363:-|nuORF 26.020703789607367 0.4812285719068541 4 SAN 3 -1 44.693 0.0 0.0 3.9151 0.0 0.0 851.4386581090722 0.0 851.4386581090722 0.0 37.70303756120384 0.0 0.0 0 1.424742501084005 0.0 0.0 0.4247425010840047 SAN 3.9151 + + 56 + 1 3.315 31643.9 0.4099999964237213 377 3124 3500 HBL1_DMSO_200M_050219_2,3503 HBL1_DMSO_200M_050219_2,3503,EPSPSLIQSAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3509 15.86 275.0 140920.0 25 0 7796.2 + 35558 STQMTITTQK 10 73 577.7895763816894 1153.5645998301786 2 577.7897827029228 MULTI CID FTMS 0 0 0 3508 207238.25 0.2605351015523775 10 -0.0755329132080078 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 53.40400417844725 0.0601721406801337 4 [QT]S{M(Oxidation (M))|F}T{I|L}TTQK 10 2 [QT]S + + 58.091 11.054 3.4966 5.0358 5.0358 52.636 0.0 0.0 0.0 0.0 42.36243194820942 0.0 0.0 0 0.0 0.0 0.805462187404089 0.6549471895720985 [QT]S{M(Oxidation (M))|F}T{I|L}TTQK 5.0358 - 213 + 1 3.315 35938.2 1.0 378 3129 3508 HBL1_DMSO_200M_050219_2,3509 HBL1_DMSO_200M_050219_2,3509,STQMTITTQK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3514 15.889 800.0 23353.0 25 0 4790.2 -1 0 29 1163.1350059640374 3486.3831884923125 3 1163.805590808392 MULTI CID FTMS 0 0 0 3513 31214.205078125 0.4106313348283751 1 -0.016402244567871 1 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20049 0.0 0.0 2000.70430773235 1335.6129854791627 3336.3172932115126 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20049 - 1 + 1 3.315 21893.8 0.2899999916553497 379 3133 3513 HBL1_DMSO_200M_050219_2,3514 HBL1_DMSO_200M_050219_2,3514, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3517 15.903 468.0 207070.0 25 0 18113.0 -1 KQKNMNGLG 9 109 503.26039281383794 1004.506232694476 2 503.2601501345634 MULTI CID FTMS 0 0 0 3516 121829.9609375 0.612187161724974 -21 0.2369260787963867 1 Oxidation (M) _KQKNM(Oxidation (M))NGLG_ ENSG00000175267|ENST00000389398|VWA3A 11.640296217721598 0.521594087909532 4 AV 2 -1 13.94 0.0 0.0 1.3877 0.0 0.0 816.3900655575603 0.0 816.3900655575603 0.0 5.356216463058274 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 AV 1.3877 - 248 + 1 3.315 77776.1 1.0 380 3135 3516 HBL1_DMSO_200M_050219_2,3517 HBL1_DMSO_200M_050219_2,3517,KQKNMNGLG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3521 15.928 800.0 56805.0 25 0 2457.4 28964 QDKDKDSRCT 10 92 598.2704564412861 1194.526359949372 2 598.2695800662041 MULTI CID FTMS 0 0 0 3520 98484.703125 0.3808824248333788 14 -0.1059103012084961 1 Unmodified _QDKDKDSRCT_ ENSG00000163605|ENST00000356692|PPP4R2;nc|ENSG00000163605|Q9NY27-2|PPP4R2;nc|ENSG00000163605|Q9NY27-3|PPP4R2 13.90604991867851 0.6142120002215601 4 {[QD]|[EN]|[WG]|[KD]|[RS]}HEAQ 6 8 26.476 0.0 0.0 2.2165 0.0 0.0 0.0 483.2209149632972 483.2209149632972 -1.2320406081154545 0.0 -1.2320406081154545 0.0 0 0.0 0.0 0.6861818737241735 1.048455006504028 {[QD]|[EN]|[WG]|[KD]|[RS]}HEAQ 2.2165 - 242 1 3.315 37948.1 0.4000000059604645 381 3138 3520 HBL1_DMSO_200M_050219_2,3521 HBL1_DMSO_200M_050219_2,3521,QDKDKDSRCT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3524 15.948 800.0 82483.0 25 0 31694.0 -1 0 61 600.1373289356269 0 600.1375610232353 PEAK CID FTMS 0 0 0 3523 76983.953125 0.8681295678586965 -2 0.0204849243164062 1 4 C 1 -1 5.4846 0.0 0.0 0.45771 0.0 0.0 696.1654221761381 396.0611971490844 1092.2266193252226 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.45771 - 4 + 1 3.315 54041.2 0.3899999856948852 382 3140 3523 HBL1_DMSO_200M_050219_2,3524 HBL1_DMSO_200M_050219_2,3524, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3527 15.969 800.0 99992.0 25 0 12723.0 + 15695 IQRLETMK 8 79 509.7891323351472 1017.5637117370944 2 509.7895690798759 MULTI CID FTMS 0 0 0 3526 98598.03125 0.0919404615344805 -44 0.3756084442138672 1 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 4 TMK 3 -1 45.445 0.0 0.0 4.4661 0.0 0.0 639.3711441882426 0.0 639.3711441882426 0.0 22.25772496747986 0.0 0.0 0 1.5 0.0 0.4247425010840047 0.0 TMK 4.4661 + + 97 1 3.315 71692.6 0.4099999964237213 383 3142 3526 HBL1_DMSO_200M_050219_2,3527 HBL1_DMSO_200M_050219_2,3527,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3532 15.997 800.0 100760.0 25 0 10256.0 + 17609 KPTAAFHLL 9 106 499.29330922875806 996.572065524316 2 499.2935668826103 MULTI CID FTMS 0 0 0 3531 109368.265625 0.3851927733386163 -36 0.3536787033081054 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 26.88365393820708 0.1891292719743517 4 KPTA 4 -1 44.993 0.0 0.0 4.5148 0.0 0.0 0.0 596.3139116721359 596.3139116721359 12.525457597537738 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 KPTA 4.5148 + + 502 + 1 3.315 65062.6 0.4199999868869781 384 3146 3531 HBL1_DMSO_200M_050219_2,3532 HBL1_DMSO_200M_050219_2,3532,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3552 16.081 473.0 114040.0 25 0 6761.3 + 38708 TTSLGQDQA 9 96 460.7195556777223 919.4245584222446 2 460.7191955447197 MULTI CID FTMS 0 0 0 3551 132661.0625 0.1696501497223153 -43 0.2854166030883789 1 Unmodified _TTSLGQDQA_ REV__ENST00000511112.2_1_4:134084133-134129298:+|nuORF 21.74664581756881 0.2544899275067181 4 SNS{I|L}[DP] 6 -1 24.822 0.0 0.0 2.6997 0.0 0.0 288.14163544069135 0.0 288.14163544069135 0.0 6.86274951188927 0.0 0.0 0 0.0 0.0 1.34733495922753 0.0 SNS{I|L}[DP] 2.6997 - 327 + 1 3.315 45690.9 1.0 385 3165 3551 HBL1_DMSO_200M_050219_2,3552 HBL1_DMSO_200M_050219_2,3552,TTSLGQDQA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3559 16.117 800.0 110390.0 25 0 43286.0 -1 0 56 660.3198609240269 659.3125844574269 1 660.3195678591728 MULTI CID FTMS 0 0 0 3558 115330.6875 0.8615967398958987 -21 0.0912704467773437 1 4 AAEK 4 -1 50.037 0.0 0.0 7.5893 0.0 0.0 242.090623924025 0.0 242.090623924025 0.0 41.05774396488272 0.0 0.0 0 1.7302046884880935 0.0 0.3807196863200844 0.0 AAEK 7.5893 - 31 1 3.315 69817.1 0.4600000083446502 386 3171 3558 HBL1_DMSO_200M_050219_2,3559 HBL1_DMSO_200M_050219_2,3559, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3562 16.137 800.0 106420.0 25 0 38500.0 + 2588 ASLLSIAHAP 10 103 490.2834056216596 0 490.2838928103447 PEAK CID FTMS 0 0 0 3561 82982.5390625 0.8944571147503048 -11 0.063568115234375 1 Unmodified _ASLLSIAHAP_ REV__ENSG00000173276|ENST00000310826|ZBTB21;REV__nc|ENSG00000173276|Q9ULJ3-2|ZBTB21 6.723162845929126 0.3961065659209837 4 D 1 -1 1.7827 0.0 0.0 0.18218 0.0 0.0 792.4519603138286 68.05124078922108 860.5032011030497 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.18218 - 8 + 1 3.315 71448.8 0.4399999976158142 387 3173 3561 HBL1_DMSO_200M_050219_2,3562 HBL1_DMSO_200M_050219_2,3562,ASLLSIAHAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3566 16.155 384.0 187940.0 25 0 15739.0 -1 MQARKDAAV 9 85 503.26039281383794 1004.506232694476 2 503.2608825564384 MULTI CID FTMS 0 0 0 3565 124603.5625 0.6261243185231602 20 -0.1089992523193359 1 Oxidation (M) _M(Oxidation (M))QARKDAAV_ ENST00000401088.8_1_1:16721635-16721806:+|nuORF 7.910154910731844 0.6385446671287552 4 V 1 -1 13.979 0.0 0.0 1.3917 0.0 0.0 887.4269079037517 0.0 887.4269079037517 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3917 + + 27 + 1 3.315 59465.1 1.0 388 3176 3565 HBL1_DMSO_200M_050219_2,3566 HBL1_DMSO_200M_050219_2,3566,MQARKDAAV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3570 16.172 347.0 259980.0 25 0 24414.0 + 39482 VARNEAPKI 9 125 333.1983475493746 996.5732132483238 3 333.1979553103447 MULTI CID FTMS 0 0 0 3569 126806.7421875 0.6860992068752358 -3 0.0173835754394531 1 Unmodified _VARNEAPKI_ REV__ENST00000590751.5_1_19:38077596-38085217:-|nuORF 25.399314129420983 0.2080152500878129 4 TPR{I|L} 4 -1 32.423 0.0 0.0 3.2534 0.0 0.0 511.2892933576188 0.0 511.2892933576188 0.0 17.48433080573001 0.0 0.0 0 0.0 0.0 0.0 0.5 TPR{I|L} 3.2534 - 326 1 3.315 75529.6 1.0 389 3179 3569 HBL1_DMSO_200M_050219_2,3570 HBL1_DMSO_200M_050219_2,3570,VARNEAPKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3573 16.192 800.0 87540.0 25 0 15242.0 + 36124 SVSRDRKVK 9 81 537.8207564473079 1073.6269599614157 2 537.8205444216728 MULTI CID FTMS 0 0 0 3572 106189.3125 0.7738624780120227 -9 0.0587425231933593 1 Unmodified _SVSRDRKVK_ REV__ENSG00000186174|ENST00000683865|BCL9L;REV__ENST00000527266.1_1_11:118773580-118779321:-|nuORF;REV__nc|ENSG00000186174|Q86UU0-2|BCL9L;REV__nc|ENSG00000186174|Q86UU0-3|BCL9L;REV__nc|ENSG00000186174|Q86UU0-4|BCL9L 15.847184025352805 0.4077185912009129 4 KMT[{I|L}P][WP]K 8 -1 28.193 0.0 0.0 2.6259 0.0 0.0 74.07689188489549 0.0 74.07689188489549 0.0 10.757659435244731 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3054621874040891 KMT[{I|L}P][WP]K 2.6259 - 77 + 1 3.315 61633.9 0.4099999964237213 390 3181 3572 HBL1_DMSO_200M_050219_2,3573 HBL1_DMSO_200M_050219_2,3573,SVSRDRKVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3578 16.209 73.0 977090.0 25 0 155550.0 + 15696 IQRLETMK 8 80 509.7891323351472 1017.5637117370944 2 509.7895995974541 MULTI CID FTMS 0 0 0 3577 1021782.5 0.9527893553945116 -1 0.0040473937988281 1 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 4 T[{I|L}P]TMK 6 -1 44.654 0.0 0.0 4.3883 0.0 0.0 328.18567326228816 0.0 328.18567326228816 0.0 19.731975075880328 0.0 0.0 0 1.924742501084005 0.0 0.0 0.3494850021680094 T[{I|L}P]TMK 4.3883 - 92 + 1 3.315 60004.1 1.0 391 3185 3577 HBL1_DMSO_200M_050219_2,3578 HBL1_DMSO_200M_050219_2,3578,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3586 16.242 393.0 201070.0 25 0 23872.0 + 17610 KPTAAFHLL 9 83 499.29330922875806 996.572065524316 2 499.2929260134697 MULTI CID FTMS 0 0 0 3585 193012.53125 0.6797861498161967 10 -0.0580368041992187 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 4 KPT 3 -1 43.5 0.0 0.0 4.365 0.0 0.0 0.0 667.3524127245894 667.3524127245894 23.19930944742332 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 KPT 4.365 + + 64 + 1 3.315 65677.0 1.0 392 3192 3585 HBL1_DMSO_200M_050219_2,3586 HBL1_DMSO_200M_050219_2,3586,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3593 16.279 800.0 159750.0 25 0 38357.0 + 13930 HYHEGTDSY 9 119 554.7200919816661 1107.425631030132 2 554.7208740115166 MULTI CID FTMS 0 0 0 3592 131361.421875 0.9968217686261788 -5 0.0200824737548828 1 Unmodified _HYHEGTDSY_ ENSG00000100554|ENST00000216442|ATP6V1D 60.38955033654506 0.025866396858536 4 {[WN]|[YH]}HEG{[ES]|[DT]|[{I|L}C]}SY 9 0 + 58.795 0.0 0.0 5.3092 5.3092 78.497 0.0 0.0 0.0 12.956349637772746 42.59758745913771 12.956349637772746 5.6427143043856205 0 0.9247425010840048 1.5228787452803376 0.9247425010840048 0.0 + + {[WN]|[YH]}HEG{[ES]|[DT]|[{I|L}C]}SY;{[WN]|[YH]}EHG{[ES]|[DT]|[{I|L}C]}SY;{[SA]|[TG]}{[CT]|[{M(Oxidation (M))|F}G]}G{M(Oxidation (M))|F}G{[ES]|[DT]|[{I|L}C]}SY;{[YC]|[HE]}YHG{[ES]|[DT]|[{I|L}C]}SY;[HM]{[ES]|[DT]|[{I|L}C]}G{M(Oxidation (M))|F}[HT]Y;{[{M(Oxidation (M))|F}C]|[YS]}[C(Carbamidomethyl (C))R]G{[ES]|[DT]|[{I|L}C]}SY;{[WN]|[YH]}E[YN][YG]Y;{[SA]|[TG]}{[CT]|[{M(Oxidation (M))|F}G]}G{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}SY;[HM]{[ES]|[DT]|[{I|L}C]}GEQQY;[HM]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}[HT]Y 5.3092;4.7997;2.9937;2.9937;2.7639;2.5842;2.502;2.3999;2.333;2.1789 +;-;-;-;-;-;-;-;-;- + 427 1 3.315 101772.2 0.5099999904632568 393 3198 3592 HBL1_DMSO_200M_050219_2,3593 HBL1_DMSO_200M_050219_2,3593,HYHEGTDSY True True HYHEGTDSY 16.278946 554.720874011517 668017.3125 3592.0 ENSG00000100554|ENST00000216442|ATP6V1D 8.300674597422281 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3601 16.319 800.0 108730.0 25 0 13983.0 + 32214 RVVEGNHTV 9 102 505.7735763842605 1009.5325998353212 2 505.7726318240166 MULTI CID FTMS 0 0 0 3600 67998.875 0.5260885677261687 -13 0.0700416564941406 1 Unmodified _RVVEGNHTV_ ENSG00000108669|ENST00000446868|CYTH1;nc|ENSG00000108669|Q15438-2|CYTH1;nc|ENSG00000108669|Q15438-3|CYTH1 32.78568957990786 0.1150597335874693 4 HTV 3 6 34.253 0.0 0.0 3.3929 0.0 0.0 654.3441791310242 0.0 654.3441791310242 0.0 24.252509456924827 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + HTV 3.3929 + + 61 1 3.315 69507.6 0.4300000071525574 394 3205 3600 HBL1_DMSO_200M_050219_2,3601 HBL1_DMSO_200M_050219_2,3601,RVVEGNHTV True True RVVEGNHTV 16.319313 505.772631824017 646215.3125 3600.0 ENSG00000108669|ENST00000446868|CYTH1;;nc|ENSG00000108669|Q15438-2|CYTH1;;nc|ENSG00000108669|Q15438-3|CYTH1 1.186800201733907 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3604 16.328 74.0 428390.0 25 0 30989.0 10999 GASEAEKTGA 10 73 460.7195556777223 919.4245584222446 2 460.7196533083916 MULTI CID FTMS 0 0 0 3603 698707.9375 0.8935244748928886 -1 0.0040283203125 1 Unmodified _GASEAEKTGA_ CON__Q3SX14;ENSG00000148180|ENST00000432226|GSN;ENST00000373806.1_2_9:124089055-124094878:+|nuORF;ENST00000373807.5_1_9:124074589-124093809:+|nuORF;nc|ENSG00000148180|P06396-3|GSN;nc|ENSG00000148180|P06396-4|GSN;nc|ENSG00000148180|P06396|GSN 11.640296217721598 0.652229146672156 4 AA 2 8 16.198 0.0 0.0 1.7617 0.0 0.0 759.3395802501727 0.0 759.3395802501727 0.0 5.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 AA 1.7617 - 103 + 1 3.315 34598.9 1.0 395 3207 3603 HBL1_DMSO_200M_050219_2,3604 HBL1_DMSO_200M_050219_2,3604,GASEAEKTGA False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 3624 16.417 800.0 150010.0 25 0 16246.0 + 17799 KQKNSNTW 8 115 503.26039281383794 1004.506232694476 2 503.2614013552666 MULTI CID FTMS 0 0 0 3623 72925.21875 0.3664442009272097 70 -0.6787910461425781 1 Unmodified _KQKNSNTW_ REV__ENSG00000110330|ENST00000227758|BIRC2 9.347437153973935 0.7675937258251505 4 W 1 -1 12.764 0.0 0.0 1.2707 0.0 0.0 800.4163106747478 0.0 800.4163106747478 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.2707 + + 92 + 1 3.315 96579.1 0.449999988079071 396 3226 3623 HBL1_DMSO_200M_050219_2,3624 HBL1_DMSO_200M_050219_2,3624,KQKNSNTW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3627 16.439 800.0 133820.0 25 0 5765.8 4560 DAYRDKQHI 9 131 382.52820207166207 1144.5627768151862 3 382.8627502322197 MULTI CID FTMS 0 0 0 3626 52143.21484375 0.2630394523817406 -11 0.0564708709716796 1 Unmodified _DAYRDKQHI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 24.99096001346401 0.2132109383330889 4 DA{I|L} 3 6 48.5 0.0 0.0 4.2374 0.0 0.0 0.0 842.3910277462783 842.3910277462783 11.02649416703747 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 DA{I|L} 4.2374 - 630 + 1 3.315 88068.9 0.9200000166893004 397 3228 3626 HBL1_DMSO_200M_050219_2,3627 HBL1_DMSO_200M_050219_2,3627,DAYRDKQHI False True GAGGGFGSR 16.438595 382.86275023222 701382.5625 3626.0 P04264;;ENSEMBL:ENSBTAP00000038253;;ENSG00000167768|ENST00000252244|KRT1 3.4338881174723306 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3634 16.475 800.0 124150.0 25 0 20071.0 + 15697 IQRLETMK 8 100 509.7891323351472 1017.5637117370944 2 509.7897521853447 MULTI CID FTMS 0 0 0 3633 127585.546875 0.1189706722954126 48 -0.378173828125 1 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 4 TP{I|L}TMK 6 -1 50.768 0.0 0.0 4.9891 0.0 0.0 328.18699843574376 0.0 328.18699843574376 0.0 27.57999250452839 0.0 0.0 0 2.10697580801237 0.0 0.7302046884880937 0.0 TP{I|L}TMK 4.9891 - 170 1 3.315 80479.5 0.550000011920929 398 3234 3633 HBL1_DMSO_200M_050219_2,3634 HBL1_DMSO_200M_050219_2,3634,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3637 16.495 800.0 123580.0 25 0 8701.0 + -1 GEPTCTSCA 9 103 463.1727587566781 924.3309645801562 2 463.1733886599541 MULTI CID FTMS 0 0 0 3636 106447.8046875 0.4061064763897458 -47 0.2579364776611328 1 Carbamidomethyl (C) _GEPTC(Carbamidomethyl (C))TSCA_ REV__ENSG00000012963|ENST00000013070|UBR7 16.942295170755138 0.3780752226737986 4 {[DA]|[EG]}P 3 -1 31.879 0.0 0.0 3.4489 0.0 0.0 0.0 638.1868380182249 638.1868380182249 15.681277912325342 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[DA]|[EG]}P 3.4489 + + 44 + 1 3.315 79820.5 0.4199999868869781 399 3236 3636 HBL1_DMSO_200M_050219_2,3637 HBL1_DMSO_200M_050219_2,3637,GEPTCTSCA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3638 16.509 800.0 97493.0 25 0 12205.0 + -1 PKRVDTMK 8 112 495.7738161545285 989.533079375857 2 495.7739135622978 MULTI CID FTMS 0 0 0 3636 97459.515625 0.7999907911540185 -18 0.1103534698486328 2 Oxidation (M) _PKRVDTM(Oxidation (M))K_ REV__ENSG00000184381|ENST00000332509|PLA2G6;REV__ENST00000496409.1_1_22:38511815-38516980:-|nuORF;REV__nc|ENSG00000184381|O60733-2|PLA2G6 22.736283301280096 0.5659792798204337 4 [KT]T[HK]T{M(Oxidation (M))|F}K 8 -1 + 49.87 0.0 0.0 5.0398 5.0398 78.687 0.0 0.0 0.0 2.525749891599532 29.6277502416482 2.525749891599532 6.716590673155736 0 0.8494850021680094 0.0 0.8494850021680094 0.3494850021680094 [KT]T[HK]T{M(Oxidation (M))|F}K;[HT]KKTT{M(Oxidation (M))|F}K;[KT]T[HK]GV[YG];[KT]{[YC]|[HE]}KK[YG] 5.0398;4.361;2.865;1.1262 -;-;-;- 322 1 3.315 66213.4 0.4300000071525574 400 3236 3636 HBL1_DMSO_200M_050219_2,3638 HBL1_DMSO_200M_050219_2,3638,PKRVDTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3640 16.527 800.0 85956.0 25 0 8170.5 + 17611 KPTAAFHLL 9 100 499.29330922875806 996.572065524316 2 499.2938110232353 MULTI CID FTMS 0 0 0 3639 82752.5390625 0.2914527339364723 55 -0.5081596374511719 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 11.640296217721598 0.521594087909532 4 KPT 3 -1 35.445 0.0 0.0 3.5567 0.0 0.0 0.0 667.3536319533437 667.3536319533437 21.95046257204389 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 KPT 3.5567 + + 73 + 1 3.315 60355.4 0.4099999964237213 401 3237 3639 HBL1_DMSO_200M_050219_2,3640 HBL1_DMSO_200M_050219_2,3640,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3641 16.541 800.0 146900.0 25 0 35128.0 + 34672 SPRDPAHTV 9 110 490.2510218473733 978.4874907615466 2 490.2516662478447 MULTI CID FTMS 0 0 0 3639 98840.921875 1.0 0 0.0 2 Unmodified _SPRDPAHTV_ ENSG00000080608|ENST00000397885|PUM3 38.17557092003332 0.0854718145212029 4 HTV 3 6 38.06 0.0 0.0 3.8896 0.0 0.0 623.3036843355327 0.0 623.3036843355327 0.0 25.84121882396211 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 + HTV 3.8896 + + 76 1 3.315 91716.7 0.4399999976158142 402 3237 3639 HBL1_DMSO_200M_050219_2,3641 HBL1_DMSO_200M_050219_2,3641,SPRDPAHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3650 16.585 800.0 112210.0 25 0 10928.0 + 28493 PTKGRADLTQ 10 83 543.7987767895207 1085.5830006458414 2 543.7992431521416 MULTI CID FTMS 0 0 0 3649 74820.6484375 0.5280036973875926 -10 0.0936946868896484 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 22.65808497894818 0.4596126414678359 4 TPK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TGTP 9 -1 75.384 0.0 0.0 6.9441 0.0 0.0 0.0 125.07222925357657 125.07222925357657 57.42538423561818 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.4247425010840047 0.4247425010840047 TPK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TGTP 6.9441 - 326 + 1 3.315 73047.2 0.4300000071525574 403 3245 3649 HBL1_DMSO_200M_050219_2,3650 HBL1_DMSO_200M_050219_2,3650,PTKGRADLTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3652 16.598 534.0 118910.0 25 0 8109.4 + 38709 TTSLGQDQA 9 101 460.7195556777223 919.4245584222446 2 460.7195312380791 MULTI CID FTMS 0 0 0 3651 165717.328125 0.2119232953376075 38 -0.2848129272460937 1 Unmodified _TTSLGQDQA_ REV__ENST00000511112.2_1_4:134084133-134129298:+|nuORF 25.399314129420983 0.2080152500878129 4 SNS{I|L}DP 6 -1 28.276 0.0 0.0 3.0754 0.0 0.0 288.1456161675632 0.0 288.1456161675632 0.0 5.580824061503975 0.0 0.0 0 0.0 0.0 1.2614393726401687 0.0 SNS{I|L}DP 3.0754 - 478 + 1 3.33 57147.6 1.0 404 3246 3651 HBL1_DMSO_200M_050219_2,3652 HBL1_DMSO_200M_050219_2,3652,TTSLGQDQA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3664 16.655 800.0 228800.0 25 0 40798.0 -1 0 220 331.00202065504146 0 331.0021240115166 PEAK CID FTMS 0 0 0 3663 99936.09375 0.540344015415735 -57 0.3553066253662109 1 4 E 1 -1 6.9897 0.0 0.0 1.0591 0.0 0.0 95.72366545935786 432.2003177487272 527.9239832080851 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 1.0591 - 4 + 1 3.33 148350.1 0.4000000059604645 405 3257 3663 HBL1_DMSO_200M_050219_2,3664 HBL1_DMSO_200M_050219_2,3664, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3665 16.667 733.0 156410.0 25 0 9641.1 40504 VISPAGVS 8 152 365.2101393787232 728.4057258242465 2 365.2101013064384 MULTI CID FTMS 0 0 0 3663 94223.2734375 0.8098188711505738 -15 0.0816555023193359 2 Unmodified _VISPAGVS_ ENSG00000253309|ENST00000681248|SERPINE3;nc|ENSG00000253309|A8MV23|SERPINE3 24.67388899826682 0.525179942228231 4 V{I|L}SY{I|L} 5 5 62.18 0.0 0.0 8.5365 0.0 0.0 0.0 150.05613123111564 150.05613123111564 51.071231544599485 0.0 0.0 0.0 0 0.5994850021680094 2.0 0.4247425010840047 0.0 V{I|L}SY{I|L} 8.5365 - 75 + 1 3.33 93166.3 1.0 406 3257 3663 HBL1_DMSO_200M_050219_2,3665 HBL1_DMSO_200M_050219_2,3665,VISPAGVS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3668 16.688 800.0 136200.0 25 0 18631.0 + 34754 SQAGPSNGV 9 139 408.69561792557386 815.3766829179477 2 408.6963073611259 MULTI CID FTMS 0 0 0 3667 96676.171875 0.7169470190779152 -18 0.1187992095947265 1 Unmodified _SQAGPSNGV_ ENSG00000170892|ENST00000396388|TSEN34 19.256988751693697 0.3154191944385105 4 {[QS]|[NT]}AG{[HG]|PP}PY 8 4 + 26.062 0.0 0.0 3.1963 3.1963 62.224 0.0 0.0 0.0 12.082754460870548 1.805686803821448 1.805686803821448 0.3891806603036976 0 0.1989700043360188 0.6575773191777937 0.1747425010840047 0.5114393726401688 {[QS]|[NT]}AG{[HG]|PP}PY;{[QS]|[NT]}Q{[HG]|PP}PY;{[QS]|[NT]}P[PG]APY;{[QS]|[NT]}P[QP]PY;{[QS]|[NT]}A[EP]{[RE]|[WV]};{[QS]|[NT]}P{[CP]|[EA]}{[RE]|[WV]};[QP]S[PG]APY;{[QS]|[NT]}A[PA]Q{[QS]|[NT]};{[QS]|[NT]}PAAQ{[QS]|[NT]};[PS]Q[PG]APY 3.1963;3.1486;3.1336;2.3475;1.6296;1.5183;1.5034;1.4614;1.3501;1.2766 -;-;-;-;-;-;-;-;-;- 368 1 3.341 92779.1 0.449999988079071 407 3259 3667 HBL1_DMSO_200M_050219_2,3668 HBL1_DMSO_200M_050219_2,3668,SQAGPSNGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3670 16.704 800.0 140110.0 25 0 4936.2 + 3809 DAINKELDDI 10 155 382.52820207166207 1144.5627768151862 3 382.5277892947197 MULTI CID FTMS 0 0 0 3669 44094.0625 0.1393688266640406 21 -0.1450481414794922 1 Unmodified _DAINKELDDI_ REV__ENSG00000230989|ENST00000433866|HSBP1;REV__ENST00000569301.1_1_16:83842845-83843025:+|nuORF 28.49450938151212 0.328477364964909 4 DA{I|L} 3 -1 47.435 0.0 0.0 4.1444 0.0 0.0 0.0 842.3920541836807 842.3920541836807 7.128560049321273 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 DA{I|L} 4.1444 + + 451 + 1 3.341 91730.2 0.3899999856948852 408 3260 3669 HBL1_DMSO_200M_050219_2,3670 HBL1_DMSO_200M_050219_2,3670,DAINKELDDI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3679 16.742 413.0 198590.0 25 0 25288.0 -1 EGTACCVEG 9 100 463.1727587566781 924.3309645801562 2 463.1728698611259 MULTI CID FTMS 0 0 0 3678 203697.046875 0.7771197367597485 -15 0.1099758148193359 1 Carbamidomethyl (C) _EGTACC(Carbamidomethyl (C))VEG_ ENST00000339594.8_1_7:72891424-72891535:-|nuORF 15.847184025352805 0.4077185912009129 4 [R{M(Oxidation (M))|F}]GT 4 -1 18.104 0.0 0.0 1.9586 0.0 0.0 0.0 460.0947664850219 460.0947664850219 3.4999344677648736 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 [R{M(Oxidation (M))|F}]GT 1.9586 - 30 + 1 3.341 65560.1 1.0 409 3268 3678 HBL1_DMSO_200M_050219_2,3679 HBL1_DMSO_200M_050219_2,3679,EGTACCVEG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3685 16.768 381.0 324770.0 25 0 45314.0 + 45136 YQDPQGRHV 9 145 367.181016583652 1098.521220351156 3 367.1802856326103 MULTI CID FTMS 0 0 0 3684 158251.03125 0.110260245579146 -15 0.090789794921875 1 Unmodified _YQDPQGRHV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 29.081581746732265 0.1611639662936252 4 TQPD{[WS]|[C(Carbamidomethyl (C)){I|L}]} 6 7 33.764 0.0 0.0 3.0736 0.0 0.0 366.21345408518073 0.0 366.21345408518073 0.0 12.04989525425303 0.0 0.0 0 0.6139829889124311 0.0 0.0 0.7614393726401688 TQPD{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.0736 - 372 1 3.341 106339.8 1.0 410 3273 3684 HBL1_DMSO_200M_050219_2,3685 HBL1_DMSO_200M_050219_2,3685,YQDPQGRHV False True YQDPQGRHV 16.767537 367.18028563261 23314679.0 3684.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 5.999954382578532 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3688 16.788 800.0 105170.0 25 0 10816.0 + 45138 YQDPQGRHV 9 105 550.2676761729823 1098.5207994127643 2 550.2687866091728 MULTI CID FTMS 0 0 0 3687 92743.875 0.1823766662403965 -14 0.0673732757568359 1 Unmodified _YQDPQGRHV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 36.12702656103203 0.0967173616627612 4 QPDSW 5 7 30.585 0.0 0.0 2.7842 0.0 0.0 467.2598744123063 0.0 467.2598744123063 0.0 18.36696871556164 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.3807196863200844 QPDSW 2.7842 - 108 1 3.341 69210.2 0.4600000083446502 411 3275 3687 HBL1_DMSO_200M_050219_2,3688 HBL1_DMSO_200M_050219_2,3688,YQDPQGRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3690 16.804 800.0 151280.0 25 0 41588.0 + 34673 SPRDPAHTV 9 102 490.25136746094375 978.4881819886876 2 490.2511779665947 MULTI CID FTMS 0 0 0 3689 64530.6953125 0.5362067641441817 22 -0.4402618408203125 1 Unmodified _SPRDPAHTV_ ENSG00000080608|ENST00000397885|PUM3 29.84058131909904 0.1515068451768857 4 HTV 3 6 33.94 0.0 0.0 3.4686 0.0 0.0 623.302902623897 0.0 623.302902623897 0.0 16.95046257204389 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + HTV 3.4686 + + 66 1 3.341 99185.5 0.4300000071525574 412 3276 3689 HBL1_DMSO_200M_050219_2,3690 HBL1_DMSO_200M_050219_2,3690,SPRDPAHTV False True SPRDPAHTV 16.804299 490.251177966595 2194812.75 3689.0 ENSG00000080608|ENST00000397885|PUM3 6.385481834411621 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3693 16.825 800.0 126500.0 25 0 4961.2 + 37101 TGSPVPSASV 10 132 451.2347023777132 900.4548518222264 2 451.2349731326103 MULTI CID FTMS 0 0 0 3692 72371.796875 0.0711971112860716 -18 0.1205615997314453 1 Unmodified _TGSPVPSASV_ REV__ENSG00000033327|ENST00000361507|GAB2;REV__nc|ENSG00000033327|Q9UQC2-2|GAB2 24.020572477871973 0.4289996903560794 4 {[SA]|[TG]}SPP 5 -1 38.557 0.0 0.0 4.2819 0.0 0.0 0.0 458.2255343072876 458.2255343072876 16.712113404111033 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.5 0.0 {[SA]|[TG]}SPP 4.2819 - 261 + 1 3.341 83557.4 0.4699999988079071 413 3278 3692 HBL1_DMSO_200M_050219_2,3693 HBL1_DMSO_200M_050219_2,3693,TGSPVPSASV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3698 16.853 710.0 258410.0 25 0 26896.0 -1 0 160 333.20433966080566 332.19706319420567 1 333.2011901736259 MULTI CID FTMS 0 0 0 3697 124949.6640625 0.8027562597047156 -1 0.003885269165039 1 4 {I|L} 1 -1 11.783 0.0 0.0 3.5469 0.0 0.0 201.10201422135253 0.0 201.10201422135253 0.0 1.6016757542968385 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.5469 - 28 + 1 3.351 148038.1 1.0 414 3282 3697 HBL1_DMSO_200M_050219_2,3698 HBL1_DMSO_200M_050219_2,3698, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3699 16.866 740.0 124280.0 25 0 6394.8 + 29670 QPAPTKGQTV 10 128 513.7823367888493 1025.5501206444983 2 513.7825805544853 MULTI CID FTMS 0 0 0 3697 95853.390625 0.8443665740443541 -3 0.0119762420654296 2 Unmodified _QPAPTKGQTV_ ENSG00000118217|ENST00000367942|ATF6 24.99096001346401 0.4071966087057876 4 SQ{M(Oxidation (M))|F}[WP]SE 7 9 33.372 0.0 0.0 3.2541 0.0 0.0 146.18210897658463 0.0 146.18210897658463 0.0 15.101005255278784 0.0 0.0 0 0.0 0.0 1.055462187404089 0.0 SQ{M(Oxidation (M))|F}[WP]SE 3.2541 - 711 + 1 3.351 76734.8 1.0 415 3282 3697 HBL1_DMSO_200M_050219_2,3699 HBL1_DMSO_200M_050219_2,3699,QPAPTKGQTV False True QPAPTKGQTV 16.865761 513.782580554485 1009766.375 3697.0 ENSG00000118217|ENST00000367942|ATF6 1.349454919497172 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3702 16.875 127.0 527870.0 25 0 96914.0 + -1 IQRLETMK 8 73 517.7861103411734 1033.5576677491467 2 517.7869750857353 MULTI CID FTMS 0 0 0 3701 531589.1875 0.0030425993841003 -14 0.1238212585449218 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 4 KTT[{I|L}P][WP]K 8 -1 51.292 0.0 0.0 4.9626 0.0 0.0 63.99685155342713 0.0 63.99685155342713 0.0 36.515318870489466 0.0 0.0 0 1.579689690656103 0.0 1.3494850021680094 0.2614393726401688 KTT[{I|L}P][WP]K 4.9626 - 139 + 1 3.351 56772.7 1.0 416 3284 3701 HBL1_DMSO_200M_050219_2,3702 HBL1_DMSO_200M_050219_2,3702,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3703 16.88 275.0 184900.0 25 0 12380.0 + 44951 YPQFEQSE 8 93 514.2202892190056 1026.4260255048112 2 514.2200805544853 MULTI CID FTMS 0 0 0 3701 192971.71875 0.0848842699482251 -10 0.1022968292236328 2 Unmodified _YPQFEQSE_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3 20.453626601364224 0.6087503291685402 4 {[ES]|[DT]|[{I|L}C]}EVQ[YG]SE 9 7 {[ES]|[DT]|[{I|L}C]}E + + 39.002 6.739 1.9527 3.7998 3.7998 48.017 0.0 0.0 0.0 0.0 25.04477421326463 0.0 0.0 0 0.5 0.0 0.6861818737241735 0.5 {[ES]|[DT]|[{I|L}C]}EVQ[YG]SE 3.7998 - 281 + 1 3.351 44940.1 1.0 417 3284 3701 HBL1_DMSO_200M_050219_2,3703 HBL1_DMSO_200M_050219_2,3703,YPQFEQSE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3704 16.894 800.0 83704.0 25 0 10967.0 + 17752 KQDETQTKI 9 101 545.7910648182905 1089.5675767033808 2 545.7906371951103 MULTI CID FTMS 0 0 0 3701 91630.671875 1.0 0 0.0 3 Unmodified _KQDETQTKI_ ENSG00000044115|ENST00000302763|CTNNA1;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1 38.61474834105838 0.0830609365873449 4 KQD 3 6 27.396 0.0 0.0 2.5144 0.0 0.0 0.0 715.3628023736936 715.3628023736936 8.856603226686701 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.3807196863200844 + KQD 2.5144 + + 249 + 1 3.351 59666.5 0.4600000083446502 418 3284 3701 HBL1_DMSO_200M_050219_2,3704 HBL1_DMSO_200M_050219_2,3704,KQDETQTKI True True KQDETQTKI 16.893903 545.79063719511 474591.9375 3701.0 ENSG00000044115|ENST00000302763|CTNNA1;;nc|ENSG00000044115|P35221-3|CTNNA1;;nc|ENSG00000044115|P35221-2|CTNNA1;;ENST00000522792.1_1_5:138268134-138269775:+|nuORF 1.60208261013031 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3705 16.908 800.0 124620.0 25 0 7160.1 25654 NFVSFCQPHRQ 11 108 454.8823401971133 1361.62519119154 3 454.8828002810478 MULTI CID FTMS 0 0 0 3701 85848.15625 0.3840975286403275 -5 0.045074462890625 4 Unmodified _NFVSFCQPHRQ_ ENST00000448183.6_1_6:11200558-11306280:-|nuORF 6.623454094837244 0.8438980474264925 4 {[RE]|[WV]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 9 {[RE]|[WV]}HQ + + 56.164 13.188 2.3966 4.1248 4.1248 49.105 0.0 0.0 0.0 0.0 37.71021542700183 0.0 0.0 0 0.9247425010840048 0.0 0.6747425010840047 0.8564921830680703 {[RE]|[WV]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 4.1248 - 503 + 1 3.351 79849.6 0.449999988079071 419 3284 3701 HBL1_DMSO_200M_050219_2,3705 HBL1_DMSO_200M_050219_2,3705,NFVSFCQPHRQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3706 16.922 800.0 123850.0 25 0 56104.0 23122 LSPGVLVRC 9 100 472.2728948165801 0 472.2725402712822 PEAK CID FTMS 0 0 0 3701 86039.78125 0.6949854188695705 -27 0.2315177917480468 5 Unmodified _LSPGVLVRC_ ENSG00000104814|ENST00000396857|MAP4K1;ENST00000585583.5_1_19:39088111-39100659:-|nuORF;nc|ENSG00000104814|Q92918|MAP4K1 7.910154910731844 0.3362437653303669 4 E 1 9 7.6192 0.0 0.0 0.80838 0.0 0.0 742.414901716365 68.05127893619374 810.4661806525587 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 E 0.80838 - 8 + 1 3.351 80115.8 0.449999988079071 420 3284 3701 HBL1_DMSO_200M_050219_2,3706 HBL1_DMSO_200M_050219_2,3706,LSPGVLVRC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3709 16.932 228.0 439580.0 25 0 28583.0 + 38394 TRATPSAAFL 10 95 345.5271286564371 1033.5595565695114 3 345.5267822146416 MULTI CID FTMS 0 0 0 3708 319316.0625 0.0126048199109346 -12 0.1580047607421875 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 20.41453444215458 0.5050059513928961 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 27.395 15.234 3.5491 2.6505 2.6505 45.311 0.0 0.0 0.0 0.0 12.40586352066952 0.0 0.0 0 0.5 0.0 0.7059771852360797 0.2059771852360797 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.6505 - 126 + 1 3.351 94613.2 1.0 421 3286 3708 HBL1_DMSO_200M_050219_2,3709 HBL1_DMSO_200M_050219_2,3709,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3710 16.946 800.0 35150.0 25 0 3473.7 -1 0 49 927.406421639341 3705.596580690964 4 927.9084960818292 MULTI CID FTMS 0 0 0 3708 91889.4296875 0.6390409783702298 -3 0.0597419738769531 2 4 AT 2 -1 17.206 0.0 0.0 0.46433 0.0 0.0 2696.185726486992 834.3044527643186 3530.49017925131 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 AT 0.46433 - 65 + 1 3.351 28998.4 0.4099999964237213 422 3286 3708 HBL1_DMSO_200M_050219_2,3710 HBL1_DMSO_200M_050219_2,3710, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3711 16.96 800.0 121080.0 25 0 16543.0 + -1 SVRYSSSK 8 102 478.2461498785453 954.4777468238906 2 478.2462341189384 MULTI CID FTMS 0 0 0 3708 110834.9375 0.81630737578661 -5 0.092691421508789 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SVRYSSSK_ ENSG00000186395|ENST00000269576|KRT10;P13645 37.07464296494664 0.2832322768708558 4 GQQYSSSK 8 -1 67.172 0.0 0.0 7.0376 0.0 0.0 71.07432753730625 0.0 71.07432753730625 0.0 53.1926720723289 0.0 0.0 0 2.416386562212267 0.0 0.4247425010840047 0.0 GQQYSSSK 7.0376 - 469 1 3.351 79198.6 0.5099999904632568 423 3286 3708 HBL1_DMSO_200M_050219_2,3711 HBL1_DMSO_200M_050219_2,3711,SVRYSSSK False False SVRYSSSK 16.960023 478.246234118938 570072.0 3708.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 0.6336191594600677 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3716 16.988 800.0 16811.0 25 0 2177.9 -1 0 36 678.545575591582 2710.153196499928 4 678.5468017458916 MULTI CID FTMS 0 0 0 3715 44119.19921875 1.0 0 0.0 1 4 R 1 -1 2.2185 0.0 0.0 0.081858 0.0 0.0 2031.887096501684 519.1565035455686 2551.0436000472523 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.081858 - 13 + 1 3.351 21872.2 0.4600000083446502 424 3290 3715 HBL1_DMSO_200M_050219_2,3716 HBL1_DMSO_200M_050219_2,3716, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3718 16.999 508.0 183170.0 25 0 19201.0 -1 EGTACCVEG 9 125 463.1727587566781 924.3309645801562 2 463.1732360720634 MULTI CID FTMS 0 0 0 3717 186021.84375 0.7096874916172644 8 -0.284219741821289 1 Carbamidomethyl (C) _EGTACC(Carbamidomethyl (C))VEG_ ENST00000339594.8_1_7:72891424-72891535:-|nuORF 20.453626601364224 0.2830276176381075 4 SGTGVW 6 -1 33.171 0.0 0.0 3.5886 0.0 0.0 319.0669422834 0.0 319.0669422834 0.0 12.199251417704584 0.0 0.0 0 0.0 0.0 1.0941876774005248 0.0 SGTGVW 3.5886 - 60 1 3.351 73349.9 1.0 425 3291 3717 HBL1_DMSO_200M_050219_2,3718 HBL1_DMSO_200M_050219_2,3718,EGTACCVEG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3719 17.005 308.0 218050.0 25 0 31290.0 + 19619 LGDLLDVA 8 83 408.2290460570513 814.4435391809026 2 408.2288085818291 MULTI CID FTMS 0 0 0 3717 183984.609375 0.8791918732460051 -3 0.0239887237548828 2 Unmodified _LGDLLDVA_ REV__ENSG00000100253|ENST00000216075|MIOX;REV__nc|ENSG00000100253|Q9UGB7-2|MIOX 13.50788311687929 0.7113601687236069 4 {[VA]|[{I|L}G]}D{I|L}{I|L}DAV 8 -1 + 20.633 0.0 0.0 2.5334 2.5334 77.795 0.0 0.0 0.0 0.6694678963061307 6.028650295109223 0.6694678963061307 20.632744064871098 0 0.5738194166937225 0.0 0.0 0.0 {[VA]|[{I|L}G]}D{I|L}{I|L}DAV 2.5334 - 52 1 3.351 59834.0 1.0 426 3291 3717 HBL1_DMSO_200M_050219_2,3719 HBL1_DMSO_200M_050219_2,3719,LGDLLDVA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3720 17.018 733.0 141070.0 25 0 35679.0 5237 DKAFLWEKRYY 11 97 506.930105916754 1517.768488350462 3 507.2646972537041 MULTI CID FTMS 0 0 0 3717 86774.84375 1.0 0 0.0 3 Unmodified _DKAFLWEKRYY_ ENSG00000011405|ENST00000691414|PIK3C2A 7.846045518447754 0.8381297814158264 4 [QA]D[CS][RV]K{I|L}AADNK 14 13 + 54.438 0.0 0.0 3.5867 3.5867 72.215 0.0 0.0 0.0 35.50993585561628 14.017584796895406 14.017584796895406 5.7430749969666905 0 1.774227503252014 0.0 0.0 0.6307196863200843 [QA]D[CS][RV]K{I|L}AADNK;[WQ]{[SA]|[TG]}TWK{I|L}AADNK;[QA]{[WS]|[C(Carbamidomethyl (C)){I|L}]}TWK{I|L}AADNK;[WK][CS]KQ{I|L}ATPDNK;[WQ]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W{I|L}ATPDNK;[WK][CS]KQ{I|L}[TP]ADNK;{[QD]|[EN]|[WG]|[KD]|[RS]}A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A{I|L}WKW{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WKW{I|L}ATPDNK;[KA]D{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A{I|L}WKW{[QN]|[E{I|L}]|[KN]};[WQ]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W{I|L}[TP]ADNK 3.5867;3.2083;2.9285;2.9134;2.6106;2.3894;2.2054;2.182;2.0923;2.0866 -;-;-;-;-;-;-;-;-;- 1291 + 1 3.351 82644.2 1.0 427 3291 3717 HBL1_DMSO_200M_050219_2,3720 HBL1_DMSO_200M_050219_2,3720,DKAFLWEKRYY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3722 17.022 52.0 1281900.0 25 0 257570.0 + 45137 YQDPQGRHV 9 78 367.181016583652 1098.521220351156 3 367.1808044314384 MULTI CID FTMS 0 0 0 3721 1102086.5 0.7678706873479632 4 -0.062103271484375 1 Unmodified _YQDPQGRHV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 13.90604991867851 0.4602628045680013 4 {[QD]|[EN]|[WG]|[KD]|[RS]}Y 3 7 19.507 0.0 0.0 1.7758 0.0 0.0 0.0 689.3482216541435 689.3482216541435 4.73074980804633 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.3252574989159953 {[QD]|[EN]|[WG]|[KD]|[RS]}Y 1.7758 - 67 1 3.351 62911.4 1.0 428 3292 3721 HBL1_DMSO_200M_050219_2,3722 HBL1_DMSO_200M_050219_2,3722,YQDPQGRHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3725 17.031 178.0 336580.0 25 0 42911.0 + 45139 YQDPQGRHV 9 72 550.2676761729823 1098.5207994127643 2 550.2679931521416 MULTI CID FTMS 0 0 0 3724 368808.40625 0.7252451723988116 5 -0.2466030120849609 1 Unmodified _YQDPQGRHV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 43.85829265575387 0.0542763391141878 4 [YQ]DPQ 5 4 49.481 0.0 0.0 4.5044 0.0 0.0 0.0 464.2382105140788 464.2382105140788 37.27507172544741 0.0 0.0 0.0 0 1.0 1.2218487496163564 0.0 0.805462187404089 + [YQ]DPQ 4.5044 + + 74 + 1 3.351 52469.1 1.0 429 3294 3724 HBL1_DMSO_200M_050219_2,3725 HBL1_DMSO_200M_050219_2,3725,YQDPQGRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3726 17.045 800.0 54805.0 25 0 5007.2 + 45310 YSFLLTYL 8 101 510.2748552987254 1018.5351576642508 2 510.2754089236259 MULTI CID FTMS 0 0 0 3724 162784.84375 0.2002804325531219 -4 0.053741455078125 2 Unmodified _YSFLLTYL_ REV__ENST00000355610.8_1_X:106184550-106184712:-|nuORF 5.230669730166228 0.792582437072536 4 Y 1 -1 14.604 0.0 0.0 1.4338 0.0 0.0 837.461165820304 0.0 837.461165820304 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.4338 + + 39 + 1 3.351 37956.3 0.7200000286102295 430 3294 3724 HBL1_DMSO_200M_050219_2,3726 HBL1_DMSO_200M_050219_2,3726,YSFLLTYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3728 17.061 800.0 79244.0 25 0 8601.1 31704 RRNRGTAK 8 109 479.7878362551919 957.5611195771836 2 479.7874938845634 MULTI CID FTMS 0 0 0 3727 46463.1875 0.4724030528452585 2 -0.1048316955566406 1 Unmodified _RRNRGTAK_ ENST00000368804.5_1_1:152079991-152080243:-|nuORF 24.020572477871973 0.5389365498350341 4 TAK 3 5 43.258 0.0 0.0 4.5175 0.0 0.0 639.3728822434113 0.0 639.3728822434113 0.0 31.998599570275736 0.0 0.0 0 1.325257498915995 0.0 0.3807196863200844 0.0 + TAK 4.5175 + + 89 1 3.351 55283.4 0.449999988079071 431 3295 3727 HBL1_DMSO_200M_050219_2,3728 HBL1_DMSO_200M_050219_2,3728,RRNRGTAK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3729 17.068 409.0 488680.0 25 0 85481.0 + 27753 PLPEAPRAG 9 187 303.1700937395621 0 303.1697265505791 PEAK CID FTMS 0 0 0 3727 259851.546875 0.2549679075100468 -5 0.0730762481689453 2 Unmodified _PLPEAPRAG_ REV__ENST00000177694.1_1_17:45810693-45811185:+|nuORF 12.240655878213236 0.2865688622772898 4 P{I|L}TT 4 -1 24.119 0.0 0.0 3.9911 0.0 0.0 63.99666029099473 125.07267175845938 189.0693320494541 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.9829535345634596 0.0 P{I|L}TT 3.9911 - 108 + 1 3.351 161516.7 1.0 432 3295 3727 HBL1_DMSO_200M_050219_2,3729 HBL1_DMSO_200M_050219_2,3729,PLPEAPRAG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3730 17.08 659.0 110080.0 25 0 7232.2 + -1 EEHCMSSW 8 102 533.1926372098642 1064.3707214865285 2 533.1936523318291 MULTI CID FTMS 0 0 0 3727 146247.96875 1.0 0 0.0 3 Carbamidomethyl (C) _EEHC(Carbamidomethyl (C))MSSW_ REV__ENST00000233099.5_1_2:37286102-37287764:-|nuORF 5.760428011301431 0.7893668129297577 4 W 1 -1 13.495 0.0 0.0 1.2679 0.0 0.0 860.2802806679721 0.0 860.2802806679721 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.2679 + + 12 + 1 3.351 60989.4 1.0 433 3295 3727 HBL1_DMSO_200M_050219_2,3730 HBL1_DMSO_200M_050219_2,3730,EEHCMSSW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3732 17.084 86.0 647950.0 25 0 41491.0 + 12430 GTSPPSVEK 9 82 451.2347023777132 900.4548518222264 2 451.2347289919853 MULTI CID FTMS 0 0 0 3731 1016499.0625 1.0 0 0.0 1 Unmodified _GTSPPSVEK_ ENSG00000181143|ENST00000397910|MUC16 33.4449034751529 0.1114409586740657 4 {[SA]|[TG]}SPPSVEK 9 0 + 57.385 0.0 0.0 6.3728 6.3728 91.574 0.0 0.0 0.0 38.95594016873239 12.999102350534592 12.999102350534592 30.22878745280337 0 0.0 1.6989700043360187 0.7742275032520141 0.1462566630072955 + + {[SA]|[TG]}SPPSVEK;E{[NV]|[RG]}PSVEK;[PS]{NN|[MP]|[D{I|L}]|[EV]}P[KS]{[SA]|[TG]};[PS][VP]E[KS]{[SA]|[TG]} 6.3728;3.0158;1.8139;1.7063 +;-;-;- + 88 + 1 3.351 47210.3 1.0 434 3296 3731 HBL1_DMSO_200M_050219_2,3732 HBL1_DMSO_200M_050219_2,3732,GTSPPSVEK True True GTSPPSVEK 17.084068 451.234728991985 13415605.0 3731.0 ENSG00000181143|ENST00000397910|MUC16 7.69395128885905 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3733 17.098 800.0 164070.0 25 0 5887.6 + 12271 GREQSDQGPN 10 127 544.2423998207073 1086.4702467082143 2 544.2413818240166 MULTI CID FTMS 0 0 0 3731 96640.84375 0.1979541097004463 -20 0.2913398742675781 2 Unmodified _GREQSDQGPN_ REV__ENSG00000163359|ENST00000295550|COL6A3;REV__nc|ENSG00000163359|P12111-2|COL6A3;REV__nc|ENSG00000163359|P12111-4|COL6A3 12.240655878213236 0.6421556946785427 4 [QT]T[YE]G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N 9 -1 + 19.159 0.0 0.0 1.7634 1.7634 66.316 0.0 0.0 0.0 1.4562841055376232 8.674771601701185 1.4562841055376232 3.4678748622465623 0 0.0 0.0 0.3807196863200844 0.0 [QT]T[YE]G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N;[QT]T[WY]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N 1.7634;1.4443 -;- 500 1 3.351 103045.2 0.4399999976158142 435 3296 3731 HBL1_DMSO_200M_050219_2,3733 HBL1_DMSO_200M_050219_2,3733,GREQSDQGPN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3734 17.109 620.0 292830.0 25 0 71630.0 + -1 HRELVCCR 8 95 536.7606805997084 1071.5068082662167 2 536.7612792849541 MULTI CID FTMS 0 0 0 3731 162474.484375 0.2847517089976392 -21 0.3077125549316406 3 Carbamidomethyl (C) _HRELVC(Carbamidomethyl (C))CR_ REV__ENST00000339094.5_1_15:85081807-85112930:-|nuORF 4.75600775471527 0.7954636275367004 4 R 1 -1 12.764 0.0 0.0 1.1912 0.0 0.0 897.394287979887 0.0 897.394287979887 0.0 -0.3347339481530653 -0.3347339481530653 0.0 0 0.0 0.0 0.0 0.0 R 1.1912 + + 45 + 1 3.351 141729.6 1.0 436 3296 3731 HBL1_DMSO_200M_050219_2,3734 HBL1_DMSO_200M_050219_2,3734,HRELVCCR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3735 17.123 800.0 184570.0 25 0 19412.0 -1 EESCKYNPK 9 105 577.7611737248297 1153.5077945164594 2 578.2636596560478 MULTI CID FTMS 0 0 0 3731 103404.671875 0.5030923776996681 -9 0.1192970275878906 4 Carbamidomethyl (C) _EESC(Carbamidomethyl (C))KYNPK_ ENSG00000135047|ENST00000343150|CTSL;nc|ENSG00000135047|P07711-3|CTSL 11.640296217721598 0.521594087909532 4 {NN|[MP]|[D{I|L}]|[EV]}R 3 -1 20.915 0.0 0.0 1.8132 0.0 0.0 0.0 766.3156832330686 766.3156832330686 5.189505884067064 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}R 1.8132 - 41 + 1 3.351 115010.0 0.4699999988079071 437 3296 3731 HBL1_DMSO_200M_050219_2,3735 HBL1_DMSO_200M_050219_2,3735,EESCKYNPK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3736 17.136 800.0 73079.0 25 0 4271.4 + 36518 ATAPQTQHV 9 100 476.7466613650322 0 476.7466613650322 PEAK CID FTMS 0 0 0 -1 0 5 Unmodified _TAFRKDSQ_ nc|ENSG00000104529|P29692-3|EEF1D;ENST00000526786.5_1_8:144662606-144679251:-|nuORF;ENSG00000104529|ENST00000618139|EEF1D;nc|ENSG00000104529|P29692-4|EEF1D;nc|ENSG00000104529|P29692|EEF1D 19.256988751693697 0.4320151646958274 4 A 1 7 6.9897 0.0 0.0 0.73461 0.0 0.0 172.09023327518315 705.333439010049 877.4236722852322 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.73461 + + 10 + 1 3.351 49248.7 0.4600000083446502 438 3296 3731 HBL1_DMSO_200M_050219_2,3736 HBL1_DMSO_200M_050219_2,3736,TAFRKDSQ False False ATAPQTQHV 17.136383 476.746661365032 931310.5 3731.0 nc|ENSG00000104529|P29692-3|EEF1D;;ENST00000526786.5_1_8:144662606-144679251:-|nuORF;;ENSG00000104529|ENST00000618139|EEF1D;;nc|ENSG00000104529|P29692-4|EEF1D;;nc|ENSG00000104529|P29692|EEF1D 5.735897858937581 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3737 17.15 800.0 84500.0 25 0 10943.0 32461 SAGILGLERA 10 104 493.7848693728447 0 493.7848693728447 PEAK CID FTMS 0 0 0 -1 0 6 Unmodified _SAGILGLERA_ ENST00000473486.1_1_9:131397608-131397734:-|nuORF 8.745405648335112 0.3843311602926832 4 T{M(Oxidation (M))|F} 2 10 14.776 0.0 0.0 1.4993 0.0 0.0 245.1349720447144 489.2760026487565 734.4109746934708 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T{M(Oxidation (M))|F} 1.4993 - 39 + 1 3.351 58303.8 0.449999988079071 439 3296 3731 HBL1_DMSO_200M_050219_2,3737 HBL1_DMSO_200M_050219_2,3737,SAGILGLERA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3739 17.154 0.56 113280000.0 25 0 18818000.0 + -1 IQRLETMK 8 57 517.7861103411734 1033.5576677491467 2 517.7872802615166 MULTI CID FTMS 0 0 0 3738 145685440.0 0.8338439540145591 -1 0.0702629089355468 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 4 KTT[{I|L}P][WP]K 8 -1 46.732 0.0 0.0 4.5215 0.0 0.0 63.99411006280588 0.0 63.99411006280588 0.0 20.84121882396211 0.0 0.0 0 1.3494850021680094 0.0 1.424742501084005 0.2614393726401688 KTT[{I|L}P][WP]K 4.5215 - 192 + 1 3.32 56034.3 1.0 440 3297 3738 HBL1_DMSO_200M_050219_2,3739 HBL1_DMSO_200M_050219_2,3739,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3740 17.156 52.0 719560.0 25 0 64659.0 + 44952 YPQFEQSE 8 65 514.2202892190056 1026.4260255048112 2 514.2208129763603 MULTI CID FTMS 0 0 0 3738 1328478.375 0.5843701747299663 3 -0.1406536102294922 2 Unmodified _YPQFEQSE_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3 30.63653989081413 0.3996269429323407 4 VD[HT]EQSE 8 4 47.428 0.0 0.0 4.6207 0.0 0.0 83.03801924873203 0.0 83.03801924873203 0.0 26.943284706245905 0.0 0.0 0 0.5 0.0 0.7302046884880937 0.0 VD[HT]EQSE 4.6207 - 233 1 3.32 38960.2 1.0 441 3297 3738 HBL1_DMSO_200M_050219_2,3740 HBL1_DMSO_200M_050219_2,3740,YPQFEQSE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3741 17.158 116.0 654820.0 25 0 95715.0 38431 TRQPPPPPT 9 85 330.85133781395746 0 330.8516113162041 PEAK CID FTMS 0 0 0 3738 477371.375 0.6524238781777504 -6 0.161783218383789 3 Unmodified _TRQPPPPPT_ ENST00000414318.2_1_3:17349484-18486265:-|nuORF 13.90604991867851 0.2674652324371145 4 P{I|L}T 3 7 14.609 0.0 0.0 2.2146 0.0 0.0 55.36008722595484 290.1193026178344 345.47938984378925 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 P{I|L}T 2.2146 - 29 + 1 3.32 65248.6 1.0 442 3297 3738 HBL1_DMSO_200M_050219_2,3741 HBL1_DMSO_200M_050219_2,3741,TRQPPPPPT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3742 17.164 340.0 806790.0 25 0 264130.0 10786 FYPWTIDNK 9 111 395.1964467316659 1182.5675107951977 3 395.1965820193291 MULTI CID FTMS 0 0 0 3738 273262.21875 0.4227345506229061 -7 0.1779079437255859 4 Unmodified _FYPWTIDNK_ ENSG00000103591|ENST00000261880|AAGAB;ENST00000558725.5_1_15:67519241-67546969:-|nuORF 14.838274106304384 0.4350285940865338 4 YYE 3 8 26.198 0.0 0.0 2.2153 0.0 0.0 709.3737014347057 0.0 709.3737014347057 0.0 1.359921914233908 0.0 0.0 0 0.0 0.0 0.0 0.0 YYE 2.2153 - 103 1 3.32 214470.8 1.0 443 3297 3738 HBL1_DMSO_200M_050219_2,3742 HBL1_DMSO_200M_050219_2,3742,FYPWTIDNK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3743 17.178 800.0 477280.0 25 0 44110.0 7409 EGLAGQSPGSR 11 135 529.7650774060801 1057.51560187896 2 529.7645141482353 MULTI CID FTMS 0 0 0 3738 237162.84375 0.6291275034147601 -6 0.161783218383789 5 Unmodified _EGLAGQSPGSR_ ENST00000357743.8_1_8:41348180-41348318:+|nuORF 10.150570793230772 0.8240029794358671 4 {[NV]|[RG]}AG[{I|L}P][DC]RN 10 7 + 32.029 0.0 0.0 3.0287 3.0287 71.782 0.0 0.0 0.0 0.7918124604762511 16.544679743697998 0.7918124604762511 6.53212513775344 0 0.0 0.0 0.7134679910804405 0.0 {[NV]|[RG]}AG[{I|L}P][DC]RN;{[NV]|[RG]}Q[{I|L}P][DC]RN;{[{M(Oxidation (M))|F}H]|[RQ]}G[{I|L}P][DC]RN;[DV]R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QQR;[DV]RG{[CP]|[EA]}QQR 3.0287;2.411;2.411;0.4421;0.39373 -;-;-;-;- 497 1 3.32 289282.0 0.8299999833106995 444 3297 3738 HBL1_DMSO_200M_050219_2,3743 HBL1_DMSO_200M_050219_2,3743,EGLAGQSPGSR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3744 17.192 800.0 201730.0 25 0 14266.0 4707 DDTLDEEDSF 10 119 593.2268825761811 1184.439212219162 2 593.2297241091728 MULTI CID FTMS 0 0 0 3738 249820.546875 0.6979981091618512 -8 0.1818962097167968 6 Unmodified _DDTLDEEDSF_ ENSG00000196730|ENST00000408954|DAPK1;ENST00000469067.5_1_9:90113992-90265069:+|nuORF;nc|ENSG00000196730|P53355-3|DAPK1;nc|ENSG00000196730|P53355-4|DAPK1 3.5964929083625545 0.7100006075494749 4 DDTAC 5 7 16.682 0.0 0.0 1.4085 0.0 0.0 0.0 676.2644387268876 676.2644387268876 5.844982211455401 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 DDTAC 1.4085 - 472 + 1 3.32 121490.0 0.8100000023841858 445 3297 3738 HBL1_DMSO_200M_050219_2,3744 HBL1_DMSO_200M_050219_2,3744,DDTLDEEDSF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3745 17.206 800.0 169540.0 25 0 20613.0 + 26130 NPSMPQRTV 9 122 523.2579224639852 0 523.2595703005791 PEAK CID FTMS 0 0 0 3738 224006.09375 1.0 0 0.0 7 Oxidation (M) _NPSM(Oxidation (M))PQRTV_ ENSG00000197943|ENST00000564138|PLCG2 86.33184430468982 0.0083629732369312 4 PS{M(Oxidation (M))|F}V 4 5 30.706 0.0 0.0 2.9398 0.0 0.0 114.03891279450325 497.2509249322876 611.2898377267908 0.0 0.0 0.0 0.0 0 1.066901560044258 0.0 0.3494850021680094 0.0 PS{M(Oxidation (M))|F}V 2.9398 - 117 + 1 3.32 109363.6 0.8199999928474426 446 3297 3738 HBL1_DMSO_200M_050219_2,3745 HBL1_DMSO_200M_050219_2,3745,NPSMPQRTV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3746 17.22 800.0 261040.0 25 0 38639.0 -1 VGRSWCCLCS 10 85 585.7453150371708 1169.4760771411416 2 585.7471801638603 MULTI CID FTMS 0 0 0 3738 223449.0 0.6260361240149631 -1 0.0702629089355468 8 Carbamidomethyl (C) _VGRSWC(Carbamidomethyl (C))CLCS_ ENST00000540987.1_1_12:133225370-133225942:-|nuORF 3.5964929083625545 0.7100006075494749 4 V{[RE]|[WV]} 3 -1 6.5668 0.0 0.0 0.56152 0.0 0.0 767.2661294866479 0.0 767.2661294866479 0.0 1.0822685886482493 0.0 0.0 0 0.0 0.0 0.0 0.0 V{[RE]|[WV]} 0.56152 - 30 + 1 3.32 161897.3 0.7799999713897705 447 3297 3738 HBL1_DMSO_200M_050219_2,3746 HBL1_DMSO_200M_050219_2,3746,VGRSWCCLCS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3747 17.229 530.0 268630.0 25 0 38203.0 + -1 QRTLFDMDD 9 84 578.7501466722932 0 578.7502929568291 PEAK CID FTMS 0 0 0 3738 154835.046875 0.7490844177147634 -16 0.3166961669921875 9 Oxidation (M) _QRTLFDM(Oxidation (M))DD_ REV__ENSG00000151967|ENST00000445224|SCHIP1;REV__ENSG00000283154|ENST00000638749|IQCJ-SCHIP1;REV__ENST00000472483.5_1_3:159557973-159605709:+|nuORF;REV__ENST00000482885.1_1_3:159605445-159605709:+|nuORF;REV__nc|ENSG00000283154|B3KU38-2|IQCJ-SCHIP1;REV__nc|ENSG00000283154|B3KU38|IQCJ-SCHIP1;REV__nc|ENSG00000283154|P0DPB3-2|SCHIP1;REV__nc|ENSG00000283154|P0DPB3-3|SCHIP1 3.944395688203298 0.3444685223463734 4 AG 2 -1 10.969 0.0 0.0 0.94931 0.0 0.0 871.3251396807208 153.0787752740844 1024.4039149548053 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AG 0.94931 - 10 + 1 3.32 111119.1 1.0 448 3297 3738 HBL1_DMSO_200M_050219_2,3747 HBL1_DMSO_200M_050219_2,3747,QRTLFDMDD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3749 17.233 2.6 21613000.0 25 0 1657500.0 + 38395 TRATPSAAFL 10 75 345.5271286564371 1033.5595565695114 3 345.5269653201103 MULTI CID FTMS 0 0 0 3748 25332854.0 1.0 0 0.0 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 15.248480904072842 0.5916873121453583 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 27.652 19.129 4.4567 2.6754 2.6754 45.339 0.0 0.0 0.0 0.0 7.985775332874279 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.1989700043360188 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.6754 - 89 + 1 3.32 57478.1 1.0 449 3298 3748 HBL1_DMSO_200M_050219_2,3749 HBL1_DMSO_200M_050219_2,3749,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3750 17.241 472.0 52277.0 25 0 3108.3 13195 HGHYHILL 8 68 495.2694464325946 0 495.2877380251884 PEAK CID FTMS 0 0 0 3748 45831.57421875 0.6205309741814653 1 -0.0437774658203125 2 Unmodified _HGHYHILL_ ENST00000590655.1_1_19:44436754-44436829:-|nuORF 2.889219685676258 0.5898224805723975 4 Y 1 7 4.8464 0.0 0.0 0.49026 0.0 0.0 494.3145143478079 328.11860071353755 822.4331150613455 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + Y 0.49026 + + 1 + 1 3.32 26179.6 1.0 450 3298 3748 HBL1_DMSO_200M_050219_2,3750 HBL1_DMSO_200M_050219_2,3750,HGHYHILL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3751 17.245 193.0 705130.0 25 0 109500.0 38437 TRRYSSISS 9 76 528.7768723749634 1055.5391918167268 2 528.7772704958916 MULTI CID FTMS 0 0 0 3748 367361.6875 0.9317463903030188 -21 0.4238834381103515 3 Unmodified _TRRYSSISS_ nc|ENSG00000139154|Q6ZN18-3|AEBP2 3.5964929083625545 0.7891324200061827 4 K 1 9 10.797 0.0 0.0 1.0229 0.0 0.0 63.99351486872417 860.4272579207184 924.4207727894426 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 K 1.0229 - 20 + 1 3.32 109197.5 1.0 451 3298 3748 HBL1_DMSO_200M_050219_2,3751 HBL1_DMSO_200M_050219_2,3751,TRRYSSISS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 3752 17.259 800.0 276310.0 25 0 35057.0 -1 0 164 320.692379912666 0 320.6924926638603 PEAK CID FTMS 0 0 0 3748 211413.546875 1.0 0 0.0 4 4 T 1 -1 6.7217 0.0 0.0 1.0513 0.0 0.0 210.13522256775167 325.16379724674067 535.2990198144923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T 1.0513 - 5 + 1 3.32 177486.2 0.8399999737739563 452 3298 3748 HBL1_DMSO_200M_050219_2,3752 HBL1_DMSO_200M_050219_2,3752, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3753 17.273 800.0 257360.0 25 0 31553.0 + 40019 VGETVGALPK 10 132 485.7838910980759 0 485.7848693728447 PEAK CID FTMS 0 0 0 3748 117327.71875 0.7432262644342681 -2 0.1489219665527343 5 Unmodified _VGETVGALPK_ REV__ENST00000585609.1_1_19:11362722-11362998:-|nuORF 29.081581746732265 0.2251250799338715 4 TEAP{I|L}TT 7 -1 36.235 0.0 0.0 3.7372 0.0 0.0 128.08485875689547 125.07273279361564 253.15759155051109 0.0 0.0 0.0 0.0 0 0.7429928190999391 0.0 1.610924374808178 0.0 TEAP{I|L}TT 3.7372 - 700 + 1 3.32 159420.9 0.7200000286102295 453 3298 3748 HBL1_DMSO_200M_050219_2,3753 HBL1_DMSO_200M_050219_2,3753,VGETVGALPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3755 17.291 800.0 106340.0 25 0 19123.0 -1 0 40 1120.7919409608476 3359.353993482743 3 1121.459399402142 MULTI CID FTMS 0 0 0 3754 141676.625 0.5709689617270933 -10 0.3043327331542969 1 4 E 1 -1 6.9897 0.0 0.0 0.20807 0.0 0.0 2703.122437329669 524.1640719049436 3227.286509234613 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20807 - 7 + 1 3.258 68977.1 0.6200000047683716 454 3299 3754 HBL1_DMSO_200M_050219_2,3755 HBL1_DMSO_200M_050219_2,3755, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3757 17.296 167.0 105930.0 25 0 6196.6 + 27098 PFHKRTFS 8 53 510.2748552987254 1018.5351576642508 2 510.2753173708916 MULTI CID FTMS 0 0 0 3756 693047.5625 0.852682979568771 2 -0.0085639953613281 1 Unmodified _PFHKRTFS_ REV__ENSG00000176302|ENST00000317011|FOXR1 2.059750862983233 0.8118298629782807 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.258 18527.8 1.0 455 3300 3756 HBL1_DMSO_200M_050219_2,3757 HBL1_DMSO_200M_050219_2,3757,PFHKRTFS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3763 17.317 249.0 801300.0 25 0 178880.0 + 8073 EPAPLPQR 8 150 303.1700937395621 0 303.1699706912041 PEAK CID FTMS 0 0 0 3762 782642.625 0.7679336714528466 5 -0.1392269134521484 1 Unmodified _EPAPLPQR_ REV__ENST00000398882.7_2_8:144649355-144650324:-|nuORF;REV__ENST00000533210.5_1_8:144649355-144650416:-|nuORF 14.838274106304384 0.487171416001894 4 P{I|L}TT 4 -1 28.889 0.0 0.0 4.7803 0.0 0.0 63.997141784713286 125.07259546451408 189.06973724922736 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.9916440611282626 0.0 P{I|L}TT 4.7803 - 101 + 1 3.258 158760.7 1.0 456 3305 3762 HBL1_DMSO_200M_050219_2,3763 HBL1_DMSO_200M_050219_2,3763,EPAPLPQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3765 17.335 800.0 58726.0 25 0 8889.3 -1 0 44 1122.130365509902 0 1122.130419909954 PEAK CID FTMS 0 0 0 3764 220951.75 1.0 0 0.0 1 4 Y{M(Oxidation (M))|F} 2 -1 9.464 0.0 0.0 0.42207 0.0 0.0 192.3616088500792 1736.7680147760375 1929.1296236261169 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.42207 - 9 + 1 3.258 42151.5 0.7900000214576721 457 3306 3764 HBL1_DMSO_200M_050219_2,3765 HBL1_DMSO_200M_050219_2,3765, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3766 17.349 800.0 134490.0 25 0 13728.0 37063 TGGRRHIC 8 114 450.2360313597634 0 450.2360717654228 PEAK CID FTMS 0 0 0 3764 86390.828125 0.6850478528774916 2 -0.0471076965332031 2 Unmodified _TGGRRHIC_ ENSG00000189298|ENST00000252211|ZKSCAN3;nc|ENSG00000189298|Q9BRR0-2|ZKSCAN3 12.531546534597751 0.5131024102181418 4 S 1 8 12.232 0.0 0.0 1.3614 0.0 0.0 742.366901121091 66.03585230045155 808.4027534215426 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.25 0.0 S 1.3614 - 78 + 1 3.258 87458.3 0.7599999904632568 458 3306 3764 HBL1_DMSO_200M_050219_2,3766 HBL1_DMSO_200M_050219_2,3766,TGGRRHIC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3768 17.364 679.0 204920.0 25 0 8944.9 + 12270 GRDVHDSSTN 10 128 544.2423998207073 1086.4702467082143 2 544.2424194216728 MULTI CID FTMS 0 0 0 3767 296844.3125 0.6080405480791198 -9 0.1198234558105468 1 Unmodified _GRDVHDSSTN_ REV__ENST00000566445.5_1_16:75654683-75656331:-|nuORF 8.745405648335112 0.6861838735306406 4 WG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N 5 -1 21.51 0.0 0.0 1.9798 0.0 0.0 436.1967335431656 0.0 436.1967335431656 0.0 6.561734207603749 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 WG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N 1.9798 - 214 1 3.2 109273.8 1.0 459 3307 3767 HBL1_DMSO_200M_050219_2,3768 HBL1_DMSO_200M_050219_2,3768,GRDVHDSSTN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3770 17.372 372.0 318940.0 25 0 53997.0 + 24307 MDEFQFLPQ 9 69 577.7611737248297 1153.5077945164594 2 577.7623779177666 MULTI CID FTMS 0 0 0 3769 165300.75 0.4395054954139867 -11 0.2134895324707031 1 Unmodified _MDEFQFLPQ_ REV__ENSG00000165795|ENST00000556147|NDRG2;REV__ENST00000553741.5_1_14:21488585-21492212:-|nuORF;REV__nc|ENSG00000165795|Q9UN36-2|NDRG2;REV__nc|ENSG00000165795|Q9UN36-3|NDRG2;REV__nc|ENSG00000165795|Q9UN36-4|NDRG2;REV__nc|ENSG00000165795|Q9UN36-5|NDRG2;REV__nc|ENSG00000165795|Q9UN36-6|NDRG2 1.6526216038709556 0.8569919814334629 4 K 1 -1 10.797 0.0 0.0 0.93601 0.0 0.0 97.96412814480853 924.4249277475226 1022.3890558923312 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 K 0.93601 - 6 + 1 3.2 91890.3 1.0 460 3308 3769 HBL1_DMSO_200M_050219_2,3770 HBL1_DMSO_200M_050219_2,3770,MDEFQFLPQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3771 17.378 331.0 548150.0 25 0 142960.0 + -1 HRELVCCR 8 81 536.7606805997084 1071.5068082662167 2 536.7617675662041 MULTI CID FTMS 0 0 0 3769 246131.109375 0.4313677578459225 -9 0.0910530090332031 2 Carbamidomethyl (C) _HRELVC(Carbamidomethyl (C))CR_ REV__ENST00000339094.5_1_15:85081807-85112930:-|nuORF 4.75600775471527 0.7954636275367004 4 NQ{[NV]|[RG]}N 5 -1 17.747 0.0 0.0 1.6563 0.0 0.0 484.2157765119157 0.0 484.2157765119157 0.0 4.983149635316018 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 NQ{[NV]|[RG]}N 1.6563 - 33 1 3.2 140689.6 1.0 461 3308 3769 HBL1_DMSO_200M_050219_2,3771 HBL1_DMSO_200M_050219_2,3771,HRELVCCR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3772 17.392 800.0 131530.0 25 0 14548.0 35580 STSSTSSSSKE 11 150 363.1643418145469 0 363.1639587283134 PEAK CID FTMS 0 0 0 3769 125189.6015625 0.8266768324611516 -2 0.0471076965332031 3 Unmodified _STSSTSSSSKE_ ENSG00000170234|ENST00000307063|PWWP2A 5.296884461304476 0.47618401536486 4 C(Carbamidomethyl (C)) 1 11 3.0989 0.0 0.0 0.42785 0.0 0.0 202.1457479828063 359.1271607050303 561.2729086878367 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.42785 - 11 + 1 3.2 86818.0 0.6600000262260437 462 3308 3769 HBL1_DMSO_200M_050219_2,3772 HBL1_DMSO_200M_050219_2,3772,STSSTSSSSKE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3774 17.408 800.0 35394.0 25 0 3977.5 + -1 GTGECGSGRGW 11 59 562.2314330935478 0 562.2314330935478 PEAK CID FTMS 0 0 0 -1 0 1 Carbamidomethyl (C) _GTGEC(Carbamidomethyl (C))GSGRGW_ REV__ENST00000556594.1_1_14:91518767-91526894:-|nuORF 2.9952420565917617 0.4761840153648598 4 M 1 -1 1.2591 0.0 0.0 0.11217 0.0 0.0 600.2649769275268 388.1326082818969 988.3975852094238 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.11217 - 4 + 1 3.2 30011.5 0.6700000166893005 463 3309 3773 HBL1_DMSO_200M_050219_2,3774 HBL1_DMSO_200M_050219_2,3774,GTGECGSGRGW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3775 17.422 800.0 126050.0 25 0 18125.0 + 11220 GEPRAPAA 8 145 384.70350404107546 0 384.7033874392509 PEAK CID FTMS 0 0 0 3773 156662.8125 1.0 0 0.0 2 Unmodified _GEPRAPAA_ ENSG00000116218|ENST00000367615|NPHS2;nc|ENSG00000116218|Q9NP85-2|NPHS2 12.531546534597751 0.5131024102181418 4 A 1 7 5.4846 0.0 0.0 0.7147 0.0 0.0 456.2324037346916 237.10032068424064 693.3327244189322 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.7147 + + 11 + 1 3.2 83109.0 0.7200000286102295 464 3309 3773 HBL1_DMSO_200M_050219_2,3775 HBL1_DMSO_200M_050219_2,3775,GEPRAPAA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3776 17.436 800.0 249430.0 25 0 16904.0 11423 GGSRLSSQHSG 11 131 358.17550263905565 0 358.1756469607353 PEAK CID FTMS 0 0 0 3773 117119.40625 0.6667830805497487 -5 0.0854969024658203 3 Unmodified _GGSRLSSQHSG_ ENST00000381637.3_1_19:55501058-55501561:+|nuORF 2.434785330301024 0.4761840153648598 4 {M(Oxidation (M))|F} 1 11 1.42 0.0 0.0 0.19878 0.0 0.0 484.2306917021363 80.05143152408436 564.2821232262206 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19878 - 5 + 1 3.2 161834.0 0.6200000047683716 465 3309 3773 HBL1_DMSO_200M_050219_2,3776 HBL1_DMSO_200M_050219_2,3776,GGSRLSSQHSG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3777 17.449 800.0 215670.0 25 0 15296.0 + -1 TPKSGEPRV 9 195 324.17783404339946 323.17055757679947 1 324.1809265017509 MULTI CID FTMS 0 0 0 3773 103340.6640625 0.6032605042200765 -1 0.0284614562988281 4 ENSG00000104957|ENST00000221554|YJU2B;ENST00000593174.5_1_19:13869843-13873879:+|nuORF 4 {M(Oxidation (M))|F} 1 -1 10.969 0.0 0.0 3.3942 0.0 0.0 158.09131670941508 0.0 158.09131670941508 0.0 0.527133413287233 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 3.3942 - 36 + 1 3.2 139275.7 0.6000000238418579 466 3309 3773 HBL1_DMSO_200M_050219_2,3777 HBL1_DMSO_200M_050219_2,3777, False False TPKSGEPRV 17.449335 324.180926501751 12514811.0 3773.0 ENSG00000104957|ENST00000221554|YJU2B;;ENST00000593174.5_1_19:13869843-13873879:+|nuORF 4.171717007954915 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3779 17.453 0.51 101690000.0 25 0 15701000.0 -1 TATRPITKM 9 64 517.7861103411734 1033.5576677491467 2 517.7872802615166 MULTI CID FTMS 0 0 0 3778 128290392.0 0.7342818041896141 12 -0.260721206665039 1 Oxidation (M) _TATRPITKM(Oxidation (M))_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 19.361941925380144 0.3125782356748823 4 T{M(Oxidation (M))|F}K 3 -1 31.541 0.0 0.0 3.0517 0.0 0.0 639.3684415301999 0.0 639.3684415301999 0.0 19.937106056797376 0.0 0.0 0 1.0 0.0 0.0 0.25 T{M(Oxidation (M))|F}K 3.0517 - 80 + 1 3.144 45701.0 1.0 467 3310 3778 HBL1_DMSO_200M_050219_2,3779 HBL1_DMSO_200M_050219_2,3779,TATRPITKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3780 17.458 216.0 726670.0 25 0 240330.0 10787 FYPWTIDNK 9 93 395.1964467316659 1182.5675107951977 3 395.1963073611259 MULTI CID FTMS 0 0 0 3778 227821.640625 0.352438325767574 6 -0.087310791015625 2 Unmodified _FYPWTIDNK_ ENSG00000103591|ENST00000261880|AAGAB;ENST00000558725.5_1_15:67519241-67546969:-|nuORF 20.453626601364224 0.2830276176381075 4 YYE 3 8 26.198 0.0 0.0 2.2153 0.0 0.0 709.3758398989585 0.0 709.3758398989585 0.0 1.5777973535311602 0.0 0.0 0 0.0 0.0 0.0 0.0 YYE 2.2153 - 62 1 3.144 126458.2 1.0 468 3310 3778 HBL1_DMSO_200M_050219_2,3780 HBL1_DMSO_200M_050219_2,3780,FYPWTIDNK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3781 17.471 800.0 153060.0 25 0 10904.0 13828 HTSHCPHHDD 10 128 593.2268825761811 1184.439212219162 2 593.2270995974541 MULTI CID FTMS 0 0 0 3778 179240.578125 0.5007978173986097 5 -0.0757694244384765 3 Unmodified _HTSHCPHHDD_ nc|ENSG00000114737|Q9NSE2-3|CISH 3.2813086475875832 0.7114585191678878 4 DD[TA]CW 6 9 12.408 0.0 0.0 1.0476 0.0 0.0 0.0 490.1681917779906 490.1681917779906 1.923487412610358 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DD[TA]CW 1.0476 - 214 + 1 3.144 91769.8 0.7400000095367432 469 3310 3778 HBL1_DMSO_200M_050219_2,3781 HBL1_DMSO_200M_050219_2,3781,HTSHCPHHDD False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 3783 17.48 399.0 202880.0 25 0 30319.0 + 4694 DDCERQKNY 9 55 585.7449165613126 1169.4752801894251 2 585.7446166872978 MULTI CID FTMS 0 0 0 3782 240840.9375 0.534305859463231 -6 0.1612911224365234 1 Unmodified _DDCERQKNY_ REV__ENSG00000197889|ENST00000407572|MEIG1 1.844237919475145 0.850302753031785 4 R 1 -1 3.0989 0.0 0.0 0.26499 0.0 0.0 584.1685307771189 426.1820162408813 1010.3505470180004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.26499 + + 2 + 1 3.144 66967.5 1.0 470 3311 3782 HBL1_DMSO_200M_050219_2,3783 HBL1_DMSO_200M_050219_2,3783,DDCERQKNY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3785 17.499 800.0 302400.0 25 0 32762.0 -1 0 212 309.68255005653026 617.3505471798605 2 309.6820556521416 MULTI CID FTMS 0 0 0 3784 222371.0 0.4796768661626239 -8 0.1737518310546875 1 4 T[WK]A{I|L} 5 -1 + 26.911 0.0 0.0 4.3591 4.3591 67.046 0.0 0.0 0.0 0.964467979859336 0.964467979859336 0.964467979859336 0.964467979859336 0 0.8494850021680094 0.0 0.0 0.0 T[WK]A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QT{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]T{I|L};{[NV]|[RG]}[TA]T{I|L} 4.3591;4.2029;3.8828;2.3371;0.91474 -;-;-;-;- 111 + 1 3.144 191959.0 0.8600000143051147 471 3312 3784 HBL1_DMSO_200M_050219_2,3785 HBL1_DMSO_200M_050219_2,3785, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3787 17.503 4.0 15196000.0 25 0 1115200.0 + 38396 TRATPSAAFL 10 77 345.5271286564371 1033.5595565695114 3 345.5269958376884 MULTI CID FTMS 0 0 0 3786 16429717.0 0.6485537318456105 15 -0.3537921905517578 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 20.41453444215458 0.5050059513928961 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 32.083 16.995 3.9593 3.1042 3.1042 46.154 0.0 0.0 0.0 0.0 16.141303353600094 0.0 0.0 0 0.5 0.0 0.7614393726401688 0.2302046884880938 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 3.1042 - 120 + 1 3.144 62023.4 1.0 472 3313 3786 HBL1_DMSO_200M_050219_2,3787 HBL1_DMSO_200M_050219_2,3787,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3788 17.507 216.0 692870.0 25 0 101220.0 17963 KRGELYGYA 9 74 528.7768723749634 1055.5391918167268 2 528.7772704958916 MULTI CID FTMS 0 0 0 3786 358278.5625 0.908708688715204 -6 0.1499710083007812 2 Unmodified _KRGELYGYA_ ENSG00000172716|ENST00000685675|SLFN11 4.3292370932331545 0.7635526921153418 4 K 1 8 10.797 0.0 0.0 1.0229 0.0 0.0 63.99391676253294 860.4269927399259 924.4209095024588 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + K 1.0229 + + 6 + 1 3.144 119307.6 1.0 473 3313 3786 HBL1_DMSO_200M_050219_2,3788 HBL1_DMSO_200M_050219_2,3788,KRGELYGYA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3790 17.525 800.0 140020.0 25 0 17567.0 + 24716 MPATETKKV 9 124 502.7759594514495 0 502.7756225466728 PEAK CID FTMS 0 0 0 3789 73702.140625 0.3683677016320774 -4 0.057535171508789 1 Unmodified _MPATETKKV_ ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2 43.77239144664712 0.0487019148086553 4 PAT 3 6 20.49 0.0 0.0 2.0417 0.0 0.0 131.03760069865422 600.3369845025999 731.3745852012541 0.0 0.0 0.0 0.0 0 0.6549471895720984 0.0 0.4247425010840047 0.0 + PAT 2.0417 + + 99 + 1 3.144 90837.5 0.5799999833106995 474 3314 3789 HBL1_DMSO_200M_050219_2,3790 HBL1_DMSO_200M_050219_2,3790,MPATETKKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3792 17.537 401.0 231730.0 25 0 18328.0 + 2039 MPATETKKV 9 131 335.51992071319404 1003.537932739782 3 335.5197631716728 MULTI CID FTMS 0 0 0 3791 147376.3125 0.3404781856572892 -3 0.0446891784667968 1 Unmodified _APILGPGEPGP_ ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2 14.838274106304384 0.7264935675211688 4 MPATETKVK 9 10 + 43.515 0.0 0.0 4.3362 4.3362 66.34 0.0 0.0 0.0 16.478174818886373 0.5999792967528492 0.5999792967528492 0.5999792967528492 0 0.0 0.0 0.3494850021680094 0.0 MPATETKVK;MPATETKKV;MV{[MG]|[TS]}S[RP]VK;MV{[MG]|[TS]}S[RP]KV;MV[VS]K[KT]DP;MV[VS]K{[TV]|[{I|L}S]}SGP;MV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RP]VK;MV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RP]KV;M[{I|L}T]AK[KT]DP;MV[VS]K{[TV]|[{I|L}S]}GSP 4.3362;4.2764;2.0685;2.0087;1.8018;1.664;1.6435;1.5837;1.4791;1.4053 -;-;-;-;-;-;-;-;-;- 408 + 1 3.144 77007.2 1.0 475 3315 3791 HBL1_DMSO_200M_050219_2,3792 HBL1_DMSO_200M_050219_2,3792,APILGPGEPGP False False MPATETKKV 17.53667 335.519763171673 4591912.5 3791.0 ENSG00000102316|ENST00000375068|MAGED2;;nc|ENSG00000102316|Q9UNF1-2|MAGED2 6.109009265899658 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3794 17.555 800.0 119550.0 25 0 12125.0 + 26131 NPSMPQRTV 9 123 523.2579224639852 0 523.2583495974541 PEAK CID FTMS 0 0 0 3793 134876.03125 0.6021087595970813 18 -0.3966541290283203 1 Oxidation (M) _NPSM(Oxidation (M))PQRTV_ ENSG00000197943|ENST00000564138|PLCG2 40.23920728925047 0.0605413866147893 4 PS{M(Oxidation (M))|F} 3 6 23.594 0.0 0.0 2.2589 0.0 0.0 114.0404201572822 596.3177023404135 710.3581224976957 0.0 0.0 0.0 0.0 0 0.7396518287104438 0.0 0.0 0.0 + PS{M(Oxidation (M))|F} 2.2589 + + 81 + 1 3.089 78879.4 0.7599999904632568 476 3316 3793 HBL1_DMSO_200M_050219_2,3794 HBL1_DMSO_200M_050219_2,3794,NPSMPQRTV True False NPSMPQRTV 17.55489 523.258349597454 7143247.5 3793.0 ENSG00000197943|ENST00000564138|PLCG2 8.113455772399902 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3795 17.569 800.0 265970.0 25 0 36694.0 -1 0 178 320.692379912666 0 320.6927978396416 PEAK CID FTMS 0 0 0 3793 97927.96875 0.4632057415313159 16 -0.3486061096191406 2 4 T 1 -1 7.4962 0.0 0.0 1.1724 0.0 0.0 210.13536790132423 325.16367517642817 535.2990430777525 0.0 0.0 0.0 0.0 0 0.0774509799928715 0.0 0.4247425010840047 0.0 T 1.1724 - 13 + 1 3.089 166796.3 0.6200000047683716 477 3316 3793 HBL1_DMSO_200M_050219_2,3795 HBL1_DMSO_200M_050219_2,3795, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3797 17.574 161.0 830320.0 25 0 193530.0 38664 TTKLPNPH 8 106 303.1700937395621 0 303.1699706912041 PEAK CID FTMS 0 0 0 3796 686370.625 0.6734710034910698 17 -0.3645648956298828 1 Unmodified _TTKLPNPH_ ENSG00000114841|ENST00000420323|DNAH1;ENST00000486752.5_1_3:52422617-52434459:+|nuORF;ENST00000488988.5_1_3:52422617-52433783:+|nuORF;nc|ENSG00000114841|Q9P2D7-8|DNAH1 11.494710602746466 0.5247579636878313 4 P{I|L}TT 4 7 25.973 0.0 0.0 4.2978 0.0 0.0 63.99658738474972 125.07277856998282 189.0693659547325 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 1.0010912013506126 0.0 P{I|L}TT 4.2978 - 91 + 1 3.089 113673.8 1.0 478 3317 3796 HBL1_DMSO_200M_050219_2,3797 HBL1_DMSO_200M_050219_2,3797,TTKLPNPH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3798 17.576 113.0 133160.0 25 0 10575.0 + 10356 FSKFKLFC 8 48 510.2748552987254 1018.5351576642508 2 510.2756225466728 MULTI CID FTMS 0 0 0 3796 638054.6875 0.7850231376657083 19 -0.4071178436279297 2 Unmodified _FSKFKLFC_ REV__ENSG00000005189|ENST00000261377|REXO5;REV__nc|ENSG00000005189|Q96IC2-2|REXO5 2.059750862983233 0.8118298629782807 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.089 19059.3 1.0 479 3317 3796 HBL1_DMSO_200M_050219_2,3798 HBL1_DMSO_200M_050219_2,3798,FSKFKLFC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3799 17.58 213.0 623700.0 25 0 93243.0 43210 WAKPFTQL 8 98 330.851547398452 0 330.8514587283134 PEAK CID FTMS 0 0 0 3796 516295.1875 0.992567986608474 1 -0.0333938598632812 3 Unmodified _WAKPFTQL_ ENSG00000198752|ENST00000361246|CDC42BPB 11.640296217721598 0.5231213682848052 4 P{I|L}T 3 6 18.857 0.0 0.0 2.8584 0.0 0.0 55.36071499354177 290.1188143365844 345.4795293301262 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 P{I|L}T 2.8584 - 49 + 1 3.089 109606.2 1.0 480 3317 3796 HBL1_DMSO_200M_050219_2,3799 HBL1_DMSO_200M_050219_2,3799,WAKPFTQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3800 17.594 800.0 117690.0 25 0 22503.0 -1 CRDPQHCYG 9 86 596.7341186404228 0 596.7341186404228 PEAK CID FTMS 0 0 0 -1 0 4 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))RDPQHC(Carbamidomethyl (C))YG_ ENST00000425637.2_1_12:123738829-123738982:+|nuORF 0.6014990680409731 0.3444685223463735 4 Q 1 -1 1.1092 0.0 0.0 0.0931 0.0 0.0 823.2719959704956 237.0999544733032 1060.3719504437988 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.0931 + + 2 + 1 3.089 73500.6 0.6600000262260437 481 3317 3796 HBL1_DMSO_200M_050219_2,3800 HBL1_DMSO_200M_050219_2,3800,CRDPQHCYG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3801 17.602 458.0 44266.0 25 0 3204.8 + 11345 GFLQLIALD 9 56 495.28794085962033 0 495.2863647341728 PEAK CID FTMS 0 0 0 3796 89665.078125 0.472948415292548 1 -0.0333938598632812 5 Unmodified _GFLQLIALD_ REV__ENSG00000273079|ENST00000609686|GRIN2B 2.059750862983233 0.3444685223463734 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.089 22430.0 1.0 482 3317 3796 HBL1_DMSO_200M_050219_2,3801 HBL1_DMSO_200M_050219_2,3801,GFLQLIALD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3804 17.617 506.0 302460.0 25 0 13488.0 -1 GRAGAACCAPP 11 134 544.2423998207073 1086.4702467082143 2 544.2421752810478 MULTI CID FTMS 0 0 0 3803 396895.0625 0.8129793335097046 3 -0.1042823791503906 1 2 Carbamidomethyl (C) _GRAGAAC(Carbamidomethyl (C))C(Carbamidomethyl (C))APP_ ENST00000555234.1_1_14:75415208-75421922:-|nuORF 9.38312468134398 0.8308777417566128 4 GCKAS 5 -1 17.792 0.0 0.0 1.6376 0.0 0.0 622.2645462525 0.0 622.2645462525 0.0 6.822581265925436 0.0 0.0 0 0.0 0.0 0.0 0.0 GCKAS 1.6376 - 388 1 3.089 117524.2 1.0 483 3319 3803 HBL1_DMSO_200M_050219_2,3804 HBL1_DMSO_200M_050219_2,3804,GRAGAACCAPP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3805 17.627 608.0 133340.0 25 0 32088.0 + 28309 PRRPPPPPP 9 92 505.79833978216 1009.58212663112 2 505.7983886599541 MULTI CID FTMS 0 0 0 3803 114976.8046875 0.2592447866664928 -16 0.3027324676513672 2 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 57.47134341890925 0.0274820932774257 4 RPRPPPPPP 9 2 + 44.222 0.0 0.0 4.3802 4.3802 73.098 0.0 0.0 0.0 23.02432802706015 4.089161662900828 4.089161662900828 4.24742501084004 0 2.267220322351953 0.0 0.0 0.0 RPRPPPPPP;PRRPPPPPP;[RP]R[YK]PPP;RPRPPP[YK];RPR[YK]PPP;PRRPPP[YK];PRR[YK]PPP;RPR[YK][YK];RPRP[YK]PP;PRR[YK][YK] 4.3802;3.9595;3.7085;3.1953;3.1247;2.7746;2.704;1.9465;1.7588;1.5258 -;+;-;-;-;-;-;-;-;- + 176 + 1 3.089 67220.4 1.0 484 3319 3803 HBL1_DMSO_200M_050219_2,3805 HBL1_DMSO_200M_050219_2,3805,PRRPPPPPP True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3807 17.641 608.0 253470.0 25 0 38396.0 + -1 TSVCESSQRT 10 103 577.7611737248297 1153.5077945164594 2 577.7623168826103 MULTI CID FTMS 0 0 0 3806 230457.03125 0.6127445380082538 1 -0.0531864166259765 1 Carbamidomethyl (C) _TSVC(Carbamidomethyl (C))ESSQRT_ REV__ENST00000469810.1_3_1:52900976-52902643:-|nuORF 6.2057823575117 0.6979311171683138 4 {NN|[MP]|[D{I|L}]|[EV]}R 3 -1 19.666 0.0 0.0 1.7049 0.0 0.0 0.0 766.3159273736936 766.3159273736936 7.6760624017703165 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}R 1.7049 - 16 + 1 3.036 120470.0 1.0 485 3320 3806 HBL1_DMSO_200M_050219_2,3807 HBL1_DMSO_200M_050219_2,3807,TSVCESSQRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3808 17.653 666.0 354090.0 25 0 86050.0 + -1 HRELVCCR 8 108 536.7606805997084 1071.5068082662167 2 536.7609741091728 MULTI CID FTMS 0 0 0 3806 317893.25 0.5571376118811812 3 -0.1191864013671875 2 Carbamidomethyl (C) _HRELVC(Carbamidomethyl (C))CR_ REV__ENST00000339094.5_1_15:85081807-85112930:-|nuORF 7.910154910731844 0.7763180056447161 4 N 1 -1 15.181 0.0 0.0 1.4168 0.0 0.0 939.4525612953169 0.0 939.4525612953169 0.0 2.41685101998332 0.0 0.0 0 0.5 0.0 0.0 0.0 N 1.4168 - 24 + 1 3.036 180456.7 1.0 486 3320 3806 HBL1_DMSO_200M_050219_2,3808 HBL1_DMSO_200M_050219_2,3808,HRELVCCR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3809 17.666 800.0 119570.0 25 0 10292.0 + 26751 PAAPVPRG 8 112 382.72474168738114 763.4349304415623 2 382.7237731814384 MULTI CID FTMS 0 0 0 3806 111633.6640625 0.897477723075748 1 -0.0531864166259765 3 Unmodified _PAAPVPRG_ ENSG00000215910|ENST00000688073|C1orf167;nc|nan|Q5SNV9-2|C1orf167;nc|nan|Q5SNV9-3|C1orf167 32.116972079565 0.368454113111938 4 APAPV[PG]R 8 4 + 57.186 0.0 0.0 7.4906 7.4906 83.453 0.0 0.0 0.0 23.004991921373552 3.332146790353825 3.332146790353825 3.332146790353825 0 0.9247425010840048 1.5228787452803376 0.0 0.3494850021680094 APAPV[PG]R;APAPV{[NV]|[RG]}P;APA[KQ][H{I|L}];A[HK]V{[NV]|[RG]}P 7.4906;7.0542;5.8972;0.94674 -;-;-;- 65 + 1 3.036 77682.2 0.7400000095367432 487 3320 3806 HBL1_DMSO_200M_050219_2,3809 HBL1_DMSO_200M_050219_2,3809,PAAPVPRG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3810 17.68 800.0 37380.0 25 0 7169.8 -1 0 21 1066.7684613824008 3197.2835547474024 3 1067.102099597454 MULTI CID FTMS 0 0 0 3806 92672.40625 1.0 0 0.0 4 4 G 1 -1 6.9897 0.0 0.0 0.21861 0.0 0.0 1944.6760851202528 1192.5679086194095 3137.243993739662 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21861 - 2 + 1 3.036 35506.6 0.5799999833106995 488 3320 3806 HBL1_DMSO_200M_050219_2,3810 HBL1_DMSO_200M_050219_2,3810, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3812 17.696 800.0 34941.0 25 0 4347.0 + -1 MTFSCFMLS 9 64 562.2324096560478 0 562.2324096560478 PEAK CID FTMS 0 0 0 -1 0 1 Carbamidomethyl (C) _MTFSC(Carbamidomethyl (C))FMLS_ REV__ENST00000471702.2_2_3:132339980-132400782:-|nuORF 4.75600775471527 0.3444685223463735 4 K 1 -1 1.1092 0.0 0.0 0.098823 0.0 0.0 807.2877847638687 184.0407198541625 991.3285046180312 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.098823 - 2 + 1 3.036 26992.0 0.6299999952316284 489 3321 3811 HBL1_DMSO_200M_050219_2,3812 HBL1_DMSO_200M_050219_2,3812,MTFSCFMLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3813 17.71 800.0 120480.0 25 0 12270.0 11068 GEARPAPA 8 129 384.70350404107546 0 384.7036620974541 PEAK CID FTMS 0 0 0 3811 92432.9609375 0.5900121379315848 11 -0.2048625946044922 2 Unmodified _GEARPAPA_ nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127|CDK11B 18.13498045792455 0.4501116112875982 4 V 1 8 5.7133 0.0 0.0 0.74451 0.0 0.0 510.25385759211343 155.04683862857658 665.30069622069 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 V 0.74451 - 15 + 1 3.036 79293.2 0.5600000023841858 490 3321 3811 HBL1_DMSO_200M_050219_2,3813 HBL1_DMSO_200M_050219_2,3813,GEARPAPA False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 3815 17.714 0.86 54582000.0 25 0 8606700.0 + -1 IQRLETMK 8 64 517.7861103411734 1033.5576677491467 2 517.7873412966728 MULTI CID FTMS 0 0 0 3814 67513024.0 0.3864169739930073 24 -0.3240871429443359 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 4 T{M(Oxidation (M))|F}K 3 -1 33.689 0.0 0.0 3.2595 0.0 0.0 639.367251344653 0.0 639.367251344653 0.0 18.91293925932877 0.0 0.0 0 1.0 0.0 0.0 0.2887254899964357 T{M(Oxidation (M))|F}K 3.2595 + + 48 + 1 3.019 41753.3 1.0 491 3322 3814 HBL1_DMSO_200M_050219_2,3815 HBL1_DMSO_200M_050219_2,3815,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3816 17.719 214.0 300270.0 25 0 24723.0 11424 GGSRLSSQHSG 11 71 358.1754067465136 0 358.1755859255791 PEAK CID FTMS 0 0 0 3814 207513.921875 1.0 0 0.0 2 Unmodified _GGSRLSSQHSG_ ENST00000381637.3_1_19:55501058-55501561:+|nuORF 2.434785330301024 0.4761840153648598 4 E 1 11 4.6041 0.0 0.0 0.64453 0.0 0.0 298.2976080713491 283.9759512865992 582.2735593579482 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.64453 - 3 + 1 3.019 56301.8 1.0 492 3322 3814 HBL1_DMSO_200M_050219_2,3816 HBL1_DMSO_200M_050219_2,3816,GGSRLSSQHSG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3817 17.732 800.0 118880.0 25 0 4872.5 + 3645 DAEMTTRMV 9 129 543.2336422986572 1084.4527316641145 2 543.2339355349541 MULTI CID FTMS 0 0 0 3814 142797.1875 0.3681474036581018 -14 0.3463573455810547 3 2 Oxidation (M) _DAEM(Oxidation (M))TTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 45.69961567697781 0.0497987121815769 4 {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V 9 0 + 61.115 0.0 0.0 5.6356 5.6356 86.534 0.0 0.0 0.0 40.440958400865895 4.083582202208746 4.083582202208746 13.010299956639813 0 0.8494850021680094 2.0 0.9731975075880328 0.0 + + {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V;{[DA]|[EG]}{M(Oxidation (M))|F}ETTR{M(Oxidation (M))|F}V;{[DA]|[EG]}[H{I|L}][PA]TE[EC];{[DA]|[EG]}E[W{M(Oxidation (M))|F}][TA]{M(Oxidation (M))|F}V;WE{M(Oxidation (M))|F}[VS][TA]{M(Oxidation (M))|F}V;{[DA]|[EG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}K[DP]{M(Oxidation (M))|F}V;[YT]RTT[DP][EC];{[DA]|[EG]}[H{I|L}][W{M(Oxidation (M))|F}][C(Carbamidomethyl (C))H];{[CT]|[{M(Oxidation (M))|F}G]}EETTR{M(Oxidation (M))|F}V;[TP]K{[ES]|[DT]|[{I|L}C]}YE[EC] 5.6356;4.4359;2.3938;2.0434;1.9729;1.8828;1.8114;1.7651;1.6001;1.5736 +;-;-;-;-;-;-;-;-;- + 978 + 1 3.019 76106.1 0.6100000143051147 493 3322 3814 HBL1_DMSO_200M_050219_2,3817 HBL1_DMSO_200M_050219_2,3817,DAEMTTRMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3818 17.746 800.0 323130.0 25 0 111670.0 16626 KEHQDRIEE 9 138 395.1964467316659 1182.5675107951977 3 395.1970397830009 MULTI CID FTMS 0 0 0 3814 99844.6171875 0.1544588548389436 18 -0.2992591857910156 4 Unmodified _KEHQDRIEE_ nc|ENSG00000002079|Q9H6N6|MYH16 6.723162845929126 0.6799819581413107 4 T{M(Oxidation (M))|F}K 3 9 28.486 0.0 0.0 2.4089 0.0 0.0 788.3778778232775 0.0 788.3778778232775 0.0 7.517346757967545 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3252574989159953 T{M(Oxidation (M))|F}K 2.4089 - 105 + 1 3.019 203344.3 0.5400000214576721 494 3322 3814 HBL1_DMSO_200M_050219_2,3818 HBL1_DMSO_200M_050219_2,3818,KEHQDRIEE False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 3820 17.752 224.0 443800.0 25 0 63143.0 -1 0 111 309.68255005653026 617.3505471798605 2 309.6821166872978 MULTI CID FTMS 0 0 0 3819 369917.1875 0.7979490007226291 3 -0.0737228393554687 1 4 WA{I|L} 3 -1 26.287 0.0 0.0 4.258 0.0 0.0 229.13075453925936 0.0 229.13075453925936 0.0 13.52232157439719 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 WA{I|L} 4.258 - 24 1 3.019 85820.2 1.0 495 3323 3819 HBL1_DMSO_200M_050219_2,3820 HBL1_DMSO_200M_050219_2,3820, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3821 17.766 800.0 105510.0 25 0 13752.0 + -1 PQSLCENHDA 10 81 585.7450565693204 1169.4755602054406 2 585.7464477419853 MULTI CID FTMS 0 0 0 3819 87047.4453125 1.0 0 0.0 2 Carbamidomethyl (C) _PQSLC(Carbamidomethyl (C))ENHDA_ REV__ENSG00000204301|ENST00000375023|NOTCH4 1.4819007175156935 0.719781833666733 4 P 1 -1 9.9148 0.0 0.0 0.8478 0.0 0.0 1054.411929079267 0.0 1054.411929079267 0.0 4.430283238465815 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.8478 + + 11 + 1 3.019 68028.2 0.4600000083446502 496 3323 3819 HBL1_DMSO_200M_050219_2,3821 HBL1_DMSO_200M_050219_2,3821,PQSLCENHDA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3823 17.771 7.9 6387500.0 25 0 431100.0 + 38397 TRATPSAAFL 10 78 345.5271286564371 1033.5595565695114 3 345.5269348025322 MULTI CID FTMS 0 0 0 3822 6894354.5 0.2721507217465509 26 -0.2972946166992187 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 20.41453444215458 0.5050059513928961 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 24.628 19.391 4.5177 2.3828 2.3828 44.964 0.0 0.0 0.0 0.0 11.3566032266867 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.3828 - 73 + 1 3.019 52199.6 1.0 497 3324 3822 HBL1_DMSO_200M_050219_2,3823 HBL1_DMSO_200M_050219_2,3823,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3824 17.785 800.0 210690.0 25 0 28397.0 12268 GRAWGAWPR 9 85 528.7768723749634 1055.5391918167268 2 528.7773315310478 MULTI CID FTMS 0 0 0 3822 97996.1015625 0.2485493642954462 5 -0.0896759033203125 2 Unmodified _GRAWGAWPR_ ENST00000393203.2_1_1:117452739-117484357:+|nuORF 3.944395688203298 0.7769873103969335 4 R 1 8 12.218 0.0 0.0 1.1576 0.0 0.0 881.4268698946549 0.0 881.4268698946549 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 1.1576 + + 21 + 1 3.019 134438.5 0.4699999988079071 498 3324 3822 HBL1_DMSO_200M_050219_2,3824 HBL1_DMSO_200M_050219_2,3824,GRAWGAWPR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3826 17.802 800.0 195000.0 25 0 9843.7 + 24547 MLATKTGSVP 10 181 335.51992071319404 1003.537932739782 3 335.5199462771416 MULTI CID FTMS 0 0 0 3825 75401.6015625 0.1741976038086434 7 -0.1000919342041015 1 Unmodified _MLATKTGSVP_ REV__ENSG00000141052|ENST00000425538|MYOCD;REV__nc|ENSG00000141052|Q8IZQ8-2|MYOCD;REV__nc|ENSG00000141052|Q8IZQ8|MYOCD 13.042465956692816 0.6287021003332052 4 GT{[ET]|[MV]}KAPVM 9 -1 28.534 0.0 0.0 2.8434 0.0 0.0 71.07435805488437 0.0 71.07435805488437 0.0 15.346833534576591 0.0 0.0 0 0.1549471895720985 0.0 0.8100830388275924 0.0 GT{[ET]|[MV]}KAPVM 2.8434 - 365 1 2.991 124794.8 0.3600000143051147 499 3325 3825 HBL1_DMSO_200M_050219_2,3826 HBL1_DMSO_200M_050219_2,3826,MLATKTGSVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3827 17.807 279.0 253440.0 25 0 30081.0 + 42263 VSPHPPGPLSV 11 114 362.8682836835826 1085.5830216509478 3 362.8678466677666 MULTI CID FTMS 0 0 0 3825 190573.171875 0.7231182961450633 2 -0.0511093139648437 2 Unmodified _VSPHPPGPLSV_ REV__ENST00000336576.9_2_2:220149801-220149909:+|nuORF 22.736283301280096 0.5583477779825423 4 MSKPTV 6 -1 48.849 0.0 0.0 4.4998 0.0 0.0 424.232225486525 0.0 424.232225486525 0.0 32.65153777800478 0.0 0.0 0 0.4247425010840047 0.0 1.274227503252014 0.0 MSKPTV 4.4998 - 454 1 2.991 69861.1 1.0 500 3325 3825 HBL1_DMSO_200M_050219_2,3827 HBL1_DMSO_200M_050219_2,3827,VSPHPPGPLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3828 17.82 715.0 136450.0 25 0 12286.0 + 11417 GGQVIAGKT 9 131 415.740159065046 0 415.7404052615166 PEAK CID FTMS 0 0 0 3825 86871.09375 1.0 0 0.0 3 Unmodified _GGQVIAGKT_ REV__ENSG00000107518|ENST00000355044|ATRNL1 41.8396318013385 0.053988301646488 4 V{I|L}QT 4 -1 25.557 0.0 0.0 3.0811 0.0 0.0 242.09994276042568 143.08332239322502 385.1832651536507 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9361818737241736 0.4247425010840047 V{I|L}QT 3.0811 - 56 + 1 2.991 82274.6 1.0 501 3325 3825 HBL1_DMSO_200M_050219_2,3828 HBL1_DMSO_200M_050219_2,3828,GGQVIAGKT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3830 17.836 800.0 87509.0 25 0 7752.2 + 26132 NPSMPQRTV 9 122 523.2579224639852 0 523.2574340701103 PEAK CID FTMS 0 0 0 3829 102882.3203125 0.4592835783624748 28 -0.2597637176513672 1 Oxidation (M) _NPSM(Oxidation (M))PQRTV_ ENSG00000197943|ENST00000564138|PLCG2 45.739877483867886 0.0433205460926695 4 PS{M(Oxidation (M))|F} 3 6 26.753 0.0 0.0 2.5613 0.0 0.0 114.04093245901932 596.3175025469725 710.3584350059919 0.0 0.0 0.0 0.0 0 1.055462187404089 0.0 0.0 0.0 + PS{M(Oxidation (M))|F} 2.5613 + + 39 + 1 2.991 61404.2 0.4799999892711639 502 3326 3829 HBL1_DMSO_200M_050219_2,3830 HBL1_DMSO_200M_050219_2,3830,NPSMPQRTV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3832 17.852 800.0 61382.0 25 0 12240.0 40230 VGSERKRGM 9 93 510.2748552987254 1018.5351576642508 2 510.2747985720634 MULTI CID FTMS 0 0 0 3831 134197.984375 0.1651089237746195 29 -0.2552967071533203 1 Unmodified _VGSERKRGM_ ENSG00000269335|ENST00000594239|IKBKG;nc|ENSG00000269335|Q9Y6K9-2|IKBKG 4.75600775471527 0.7486543447549536 4 W 1 9 12.764 0.0 0.0 1.2532 0.0 0.0 814.4441675292884 0.0 814.4441675292884 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.2532 - 41 + 1 2.991 45104.7 0.5899999737739563 503 3327 3831 HBL1_DMSO_200M_050219_2,3832 HBL1_DMSO_200M_050219_2,3832,VGSERKRGM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3836 17.876 800.0 163950.0 25 0 10402.0 + 21312 LPEQGGSRHV 10 154 360.52474326840735 1078.552400405422 3 360.5244323611259 MULTI CID FTMS 0 0 0 3835 90130.09375 0.8017248340663762 1 -0.0162887573242187 1 Unmodified _LPEQGGSRHV_ ENSG00000090924|ENST00000425673|PLEKHG2;nc|ENSG00000090924|Q9H7P9-3|PLEKHG2 32.037481411007896 0.2488723560272515 4 {I|L}PEQGGSRHV 10 0 + 62.612 0.0 0.0 5.8052 5.8052 77.911 0.0 0.0 0.0 49.35123398905653 5.536049848239344 5.536049848239344 3.521825181113627 0 0.0 1.0 0.5 0.4247425010840047 + + {I|L}PEQGGSRHV;{I|L}PEQNSRHV;{I|L}PE[AG]GGSRHV;{I|L}PEQGGS[HV]R;{I|L}PE[AG]NSRHV;{I|L}PEQGGH[VS]R;{I|L}PEQNS[HV]R;{I|L}PEQV[WP]NP;{I|L}PEQNH[VS]R;{I|L}PE[AG]GGS[HV]R 5.8052;5.4787;4.9555;4.8471;4.6249;4.568;4.5205;4.5011;4.2414;3.9974 +;-;-;-;-;-;-;-;-;- + 557 + 1 2.991 112420.4 0.5799999833106995 504 3330 3835 HBL1_DMSO_200M_050219_2,3836 HBL1_DMSO_200M_050219_2,3836,LPEQGGSRHV False True LPEQGGSRHV 17.875876 360.524432361126 538944.375 3835.0 ENSG00000090924|ENST00000425673|PLEKHG2;;nc|ENSG00000090924|Q9H7P9-3|PLEKHG2 6.625569502512614 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3838 17.885 271.0 346190.0 25 0 114460.0 31709 RRPPPPPPP 9 71 505.79833978216 1009.58212663112 2 505.7987853884697 MULTI CID FTMS 0 0 0 3837 276744.78125 0.6239923084592504 -4 0.0402030944824218 1 Unmodified _RRPPPPPPP_ ENSG00000099381|ENST00000262519|SETD1A;ENSG00000117560|ENST00000367721|FASLG;ENST00000360947.7_1_14:21561312-21566652:-|nuORF;nc|ENSG00000117560|P48023-2|FASLG;REV__ENSG00000120549|ENST00000376454|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-10|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-2|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-3|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-4|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-6|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-7|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-8|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-9|KIAA1217 28.486842064014134 0.1687311288560894 4 RPR{[HG]|PP}PPPP 9 2 + 35.531 0.0 0.0 3.5193 3.5193 69.72 0.0 0.0 0.0 14.27108148272638 1.8146304281570096 1.8146304281570096 3.88743756437102 0 1.9489700043360187 0.0 0.0 0.0 RPR{[HG]|PP}PPPP;[RP]P[YK]RPP;{[HG]|PP}R[YK]RPP;RPR[YK]PPP;RPR{[HG]|PP}P[YK];RPR[YK][YK] 3.5193;3.1343;3.1343;2.8777;1.8189;1.184 -;-;-;-;-;- 183 + 1 2.979 78247.9 1.0 505 3331 3837 HBL1_DMSO_200M_050219_2,3838 HBL1_DMSO_200M_050219_2,3838,RRPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3841 17.905 800.0 108360.0 25 0 7497.7 -1 DIMAVSGRASA 11 105 547.2671908507629 1092.5198287683256 2 547.2669555544853 MULTI CID FTMS 0 0 0 3840 100142.125 0.2226857859245095 -9 0.1227321624755859 1 Oxidation (M) _DIM(Oxidation (M))AVSGRASA_ nc|ENSG00000132466|O75179-2|ANKRD17 17.11289562659939 0.6791789249425932 4 [KQ]EYSSSKH 9 -1 [KQ]E + + 35.878 11.833 3.0721 3.284 3.284 46.634 0.0 0.0 0.0 0.0 6.923195118548566 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.0 [KQ]EYSSSKH 3.284 - 461 + 1 2.979 75364.0 0.5600000023841858 506 3333 3840 HBL1_DMSO_200M_050219_2,3841 HBL1_DMSO_200M_050219_2,3841,DIMAVSGRASA False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 3842 17.919 800.0 107490.0 25 0 9956.9 + 3937 DALKNRSSV 9 96 495.2722839674646 988.5300150017292 2 495.2719299197197 MULTI CID FTMS 0 0 0 3840 90623.4921875 0.5198346199304862 -5 0.0368251800537109 2 Unmodified _DALKNRSSV_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 32.037481411007896 0.1235546156350648 4 DA{I|L}KN 5 4 58.901 0.0 0.0 5.9584 0.0 0.0 0.0 444.2201021783813 444.2201021783813 44.56485629844558 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.4247425010840047 + DA{I|L}KN 5.9584 + + 73 + 1 2.979 72524.0 0.5299999713897705 507 3333 3840 HBL1_DMSO_200M_050219_2,3842 HBL1_DMSO_200M_050219_2,3842,DALKNRSSV True True DALKNRSSV 17.918803 495.27192991972 717566.5 3840.0 nc|ENSG00000102900|Q8N1F7-2|NUP93;;ENSG00000102900|ENST00000308159|NUP93 5.49793020884196 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3843 17.933 800.0 178580.0 25 0 23323.0 + 17612 KPTAAFHLL 9 112 499.2932755692178 996.5719982052356 2 499.2933837771416 MULTI CID FTMS 0 0 0 3840 86835.390625 0.2720302576890454 -6 0.0530109405517578 3 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 34.10243960390752 0.1078313939113124 4 KPT 3 -1 37.664 0.0 0.0 3.7793 0.0 0.0 0.0 667.3539974538762 667.3539974538762 20.31743128760553 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.0 0.0 KPT 3.7793 + + 140 + 1 2.979 115006.5 0.5299999713897705 508 3333 3840 HBL1_DMSO_200M_050219_2,3843 HBL1_DMSO_200M_050219_2,3843,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3845 17.949 800.0 190820.0 25 0 28475.0 + 26743 PAAFLLLTWL 10 138 382.2299995628487 0 382.2297851443291 PEAK CID FTMS 0 0 0 3844 60427.48046875 0.3108787043243822 10 -0.0927543640136718 1 Unmodified _PAAFLLLTWL_ REV__ENSG00000198715|ENST00000362007|GLMP;REV__ENST00000484214.1_1_1:156263748-156265436:-|nuORF 4.3292370932331545 0.3961065659209837 4 PAP 3 -1 14.314 0.0 0.0 1.8774 0.0 0.0 70.0470622756372 424.23359094791255 494.2806532235497 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 PAP 1.8774 - 33 + 1 2.979 121499.6 0.8299999833106995 509 3334 3844 HBL1_DMSO_200M_050219_2,3845 HBL1_DMSO_200M_050219_2,3845,PAAFLLLTWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3846 17.953 204.0 383310.0 25 0 84451.0 + 3582 DAAHAQTEV 9 97 471.2197856352927 940.4250183373854 2 471.2196533083916 MULTI CID FTMS 0 0 0 3844 282268.25 0.3001231182796056 -27 0.5846080780029297 2 Unmodified _DAAHAQTEV_ ENSG00000154174|ENST00000284320|TOMM70 27.628801355627647 0.1796483985696185 4 {[DA]|[EG]}[HA]AQTEV 9 0 + 46.55 0.0 0.0 4.9499 4.9499 79.052 0.0 0.0 0.0 7.727562184969365 16.478174818886373 7.727562184969365 7.727562184969365 0 0.0 1.5228787452803376 0.5 0.0 + + {[DA]|[EG]}[HA]AQTEV;[HA]ADAQTEV;{[DA]|[EG]}[HA]A[AG]TEV;[HA]ADA[AG]TEV;[HA]AQ{[DA]|[EG]}TEV;[HA]ASA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EV;[HA]A[AG]{[DA]|[EG]}TEV;{[SA]|[TG]}[HA]A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EV;[HA][QT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EV;[DP][RN][DP]EV 4.9499;4.1282;3.9707;3.149;2.2672;1.9594;1.288;1.1617;0.87718;0.84864 +;-;-;-;-;-;-;-;-;- + 247 1 2.979 67492.2 1.0 510 3334 3844 HBL1_DMSO_200M_050219_2,3846 HBL1_DMSO_200M_050219_2,3846,DAAHAQTEV False True DAAHAQTEV 17.952873 471.219653308392 21719535.0 3844.0 ENSG00000154174|ENST00000284320|TOMM70 9.721192359924316 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3847 17.956 160.0 487860.0 25 0 57426.0 -1 LAWLSPRL 8 93 333.19820359508134 996.572781385444 3 333.1976806521416 MULTI CID FTMS 0 0 0 3844 235396.046875 0.5000025555466314 -3 0.0568275451660156 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LAWLSPRL_ ENST00000338483.6_1_22:38611645-38611948:+|nuORF 20.871210003555333 0.6025813472596342 4 KPTH[TA]A{I|L} 8 -1 18.262 0.0 0.0 1.8325 0.0 0.0 159.09028114540723 0.0 159.09028114540723 0.0 3.4855787361689075 0.0 0.0 0 0.0 0.0 1.5 0.0 KPTH[TA]A{I|L} 1.8325 - 118 + 1 2.979 66931.9 1.0 511 3334 3844 HBL1_DMSO_200M_050219_2,3847 HBL1_DMSO_200M_050219_2,3847,LAWLSPRL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 3848 17.967 608.0 176200.0 25 0 16051.0 32569 SASPPSRAV 9 103 436.2350120802127 0 436.2353088259697 PEAK CID FTMS 0 0 0 3844 148742.640625 1.0 0 0.0 4 Unmodified _SASPPSRAV_ ENSG00000184863|ENST00000401878|RBM33;ENST00000307403.6_1_7:155532339-155538302:+|nuORF 20.41453444215458 0.197313647343139 4 SPP 3 6 24.609 0.0 0.0 2.8272 0.0 0.0 158.06884258716985 428.2265108697876 586.2953534569574 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.5 0.0 + SPP 2.8272 + + 20 + 1 2.979 88624.5 1.0 512 3334 3844 HBL1_DMSO_200M_050219_2,3848 HBL1_DMSO_200M_050219_2,3848,SASPPSRAV False True SASPPLSGR 17.966642 436.23530882597 1092449.25 3844.0 nc|ENSG00000143847|O75335-2|PPFIA4;;nc|ENSG00000143847|O75335-1|PPFIA4;;ENSG00000143847|ENST00000295706|PPFIA4;;nc|ENSG00000143847|O75335|PPFIA4 -0.2603066762288411 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3850 17.971 11.0 4777000.0 25 0 714940.0 -1 TATRPITKM 9 72 517.7861103411734 1033.5576677491467 2 517.7870971560478 MULTI CID FTMS 0 0 0 3849 4946419.0 0.0283112820139935 37 -0.2414283752441406 1 Oxidation (M) _TATRPITKM(Oxidation (M))_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 16.149105407346934 0.3995459350917656 4 KTT[{I|L}P][WP]K 8 -1 41.913 0.0 0.0 4.0552 0.0 0.0 63.99711616198312 0.0 63.99711616198312 0.0 32.44901351812106 0.0 0.0 0 0.8807196863200843 0.0 0.8494850021680094 0.2215141619232908 KTT[{I|L}P][WP]K 4.0552 - 52 + 1 2.979 45142.5 1.0 513 3335 3849 HBL1_DMSO_200M_050219_2,3850 HBL1_DMSO_200M_050219_2,3850,TATRPITKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3851 17.975 177.0 381660.0 25 0 45954.0 + 40247 VGSSNKWIV 9 107 330.5173344300872 988.5301738904616 3 330.5170471072197 MULTI CID FTMS 0 0 0 3849 200271.328125 0.7751984329305223 -1 0.0340023040771484 2 Unmodified _VGSSNKWIV_ REV__ENSG00000142166|ENST00000270139|IFNAR1;REV__nc|ENSG00000142166|P17181-2|IFNAR1;REV__nc|ENSG00000142166|P17181-3|IFNAR1;REV__nc|ENSG00000142166|P17181-4|IFNAR1 15.847184025352805 0.4077185912009129 4 V 1 -1 11.99 0.0 0.0 1.2129 0.0 0.0 871.4507880645813 0.0 871.4507880645813 0.0 -2.302587375584512 -2.302587375584512 0.0 0 0.0 0.0 0.0 0.0 V 1.2129 + + 59 + 1 2.979 59143.4 1.0 514 3335 3849 HBL1_DMSO_200M_050219_2,3851 HBL1_DMSO_200M_050219_2,3851,VGSSNKWIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3853 17.981 152.0 243720.0 25 0 18637.0 -1 DAEMTTRMV 9 76 543.2336422986572 1084.4527316641145 2 543.2336303591728 MULTI CID FTMS 0 0 0 3852 387880.46875 1.0 0 0.0 1 2 Oxidation (M) _DAEM(Oxidation (M))TTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 29.84058131909904 0.1515068451768857 4 YRTT{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H] 7 -1 42.721 0.0 0.0 3.9394 0.0 0.0 101.0481663434586 0.0 101.0481663434586 0.0 14.304782212094338 0.0 0.0 0 1.25 0.0 0.0 0.0 YRTT{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H] 3.9394 - 115 1 2.979 33594.2 1.0 515 3336 3852 HBL1_DMSO_200M_050219_2,3853 HBL1_DMSO_200M_050219_2,3853,DAEMTTRMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3854 17.995 800.0 85555.0 25 0 6597.0 + 29860 QQSISDAEQR 10 102 581.2786042949908 1160.5426556567816 2 581.2796508669853 MULTI CID FTMS 0 0 0 3852 93488.890625 1.0 0 0.0 2 Unmodified _QQSISDAEQR_ CON__P04264;ENSG00000167768|ENST00000252244|KRT1 23.80106514851385 0.4339316747945569 4 QQS{I|L}SDAEQR 10 0 + 51.578 0.0 0.0 4.4443 4.4443 71.289 0.0 0.0 0.0 7.269987279362624 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.3252574989159953 0.0 0.0 0.2742275032520141 + + QQS{I|L}SDAEQR;QQS{I|L}SDAERQ;{[TV]|[{I|L}S]}[KC]ADS{I|L}STH;QQS{I|L}SDAQVW;QQS{I|L}SDAQER;QQS{I|L}SDAE[AG]R;YY[YK]S{I|L}STH;[AG]Q[{M(Oxidation (M))|F}V]DS{I|L}STH;QQS{I|L}SDA[AG]VW;QQS{I|L}SDA[AG]ER 4.4443;4.1849;3.7195;3.6893;3.6662;3.6546;3.3105;3.2678;2.8996;2.8765 +;-;-;-;-;-;-;-;-;- + 519 + 1 2.979 57854.3 0.4199999868869781 516 3336 3852 HBL1_DMSO_200M_050219_2,3854 HBL1_DMSO_200M_050219_2,3854,QQSISDAEQR False True QQSISDAEQR 17.994613 581.279650866985 410691.3125 3852.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 6.667364597320557 2.0 True 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 3857 18.005 184.0 477060.0 25 0 76207.0 -1 0 90 309.68255005653026 617.3505471798605 2 309.6819946169853 MULTI CID FTMS 0 0 0 3856 429385.71875 0.926228671656762 18 -0.0924186706542968 1 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}A{I|L} 6 -1 + 26.604 0.0 0.0 4.3094 4.3094 80.366 0.0 0.0 0.0 0.3174312876055296 13.505018913849652 0.3174312876055296 10.929862658764264 0 0.8494850021680094 0.0 0.6989700043360187 0.3494850021680094 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QT]{I|L} 4.3094;2.5389 -;- 54 1 2.979 76476.8 1.0 517 3338 3856 HBL1_DMSO_200M_050219_2,3857 HBL1_DMSO_200M_050219_2,3857, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3863 18.025 87.0 621820.0 25 0 39064.0 + 38398 TRATPSAAFL 10 80 345.5271286564371 1033.5595565695114 3 345.5269348025322 MULTI CID FTMS 0 0 0 3862 503121.53125 0.019860436224438 45 -0.3136940002441406 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 26.268140514670165 0.3785003716575977 4 HP{I|L}T{M(Oxidation (M))|F}K 6 -1 38.254 0.0 0.0 3.7012 0.0 0.0 292.1725459267364 0.0 292.1725459267364 0.0 29.670146398709942 0.0 0.0 0 0.5 0.0 0.7614393726401688 0.1694451763165201 HP{I|L}T{M(Oxidation (M))|F}K 3.7012 - 150 + 1 2.979 56052.8 1.0 518 3343 3862 HBL1_DMSO_200M_050219_2,3863 HBL1_DMSO_200M_050219_2,3863,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3867 18.051 800.0 81884.0 25 0 4333.8 + 6224 DTNADKQL 8 125 452.72165373582 903.42875453844 2 452.7222167849541 MULTI CID FTMS 0 0 0 3866 64815.12890625 0.4645635955943059 -40 0.7175521850585938 1 Unmodified _DTNADKQL_ ENSG00000163220|ENST00000368738|S100A9 49.93300154707207 0.1395624531867191 4 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L} 8 0 + 50.588 0.0 0.0 5.5995 5.5995 84.846 0.0 0.0 0.0 37.82353690230254 13.88312609025668 13.88312609025668 9.262137858390815 0 0.6694451763165201 0.0 0.0 1.1989700043360187 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L};{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L};{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L};{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AG[W{I|L}]{[QS]|[NT]};{[QD]|[EN]|[WG]|[KD]|[RS]}Q[W{I|L}]{[QS]|[NT]} 5.5995;4.5743;4.1875;3.1682;0.47503;0.38138 +;-;-;-;-;- + 408 + 1 2.979 52053.0 0.4199999868869781 519 3346 3866 HBL1_DMSO_200M_050219_2,3867 HBL1_DMSO_200M_050219_2,3867,DTNADKQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3877 18.091 276.0 162240.0 25 0 8051.7 + 24808 MPKAEKNAV 9 95 494.26823898798506 986.52192504277 2 494.2694579958916 MULTI CID FTMS 0 0 0 3876 108189.5390625 0.7298452818299672 -1 0.0040664672851562 1 Unmodified _MPKAEKNAV_ ENSG00000125877|ENST00000380113|ITPA;ENST00000472295.1_1_20:3202423-3204105:+|nuORF;ENST00000490838.6_1_20:3193963-3204105:+|nuORF;nc|ENSG00000125877|Q9BY32-2|ITPA;nc|ENSG00000125877|Q9BY32-3|ITPA 15.248480904072842 0.4239247793462406 4 MPKH 4 6 43.532 0.0 0.0 4.4127 0.0 0.0 0.0 490.2427157037719 490.2427157037719 12.25025480762008 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 MPKH 4.4127 - 669 + 1 2.979 37543.5 1.0 520 3355 3876 HBL1_DMSO_200M_050219_2,3877 HBL1_DMSO_200M_050219_2,3877,MPKAEKNAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3881 18.115 800.0 80331.0 25 0 11631.0 + 23530 LTLFNWPK 8 94 509.7896072296073 1017.5646615260148 2 509.7899963259697 MULTI CID FTMS 0 0 0 3880 89329.203125 1.0 0 0.0 1 Unmodified _LTLFNWPK_ REV__ENST00000464497.5_1_9:36298736-36298823:+|nuORF 19.438996006549623 0.6237395211498085 4 RW 2 -1 22.206 0.0 0.0 2.1823 0.0 0.0 657.3827595258178 0.0 657.3827595258178 0.0 0.7525749891599531 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 RW 2.1823 - 76 + 1 2.979 55059.2 0.4399999976158142 521 3358 3880 HBL1_DMSO_200M_050219_2,3881 HBL1_DMSO_200M_050219_2,3881,LTLFNWPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3884 18.129 335.0 263180.0 25 0 27390.0 17295 KLRENQLPR 9 104 385.2316014155408 1152.6729748468224 3 385.2316772341728 MULTI CID FTMS 0 0 0 3883 74947.03125 0.1618048185796854 -42 0.5177764892578125 1 Unmodified _KLRENQLPR_ ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF 6.2057823575117 0.6980434486082533 4 K{I|L} 2 7 23.469 0.0 0.0 2.0361 0.0 0.0 0.0 908.4711998327956 908.4711998327956 14.260912590556812 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 + K{I|L} 2.0361 + + 21 + 1 2.979 76511.3 1.0 522 3360 3883 HBL1_DMSO_200M_050219_2,3884 HBL1_DMSO_200M_050219_2,3884,KLRENQLPR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3887 18.14 208.0 340740.0 25 0 98105.0 28310 PRRPPPPPP 9 80 505.79833978216 1009.58212663112 2 505.7984191775322 MULTI CID FTMS 0 0 0 3886 328660.15625 0.7410488778531047 27 -0.2060222625732422 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 50.855029805455786 0.0384952370514206 4 RPR{[HG]|PP}PP{[HG]|PP} 9 2 + 37.157 0.0 0.0 3.6805 3.6805 69.557 0.0 0.0 0.0 17.94917177197477 7.147642715192511 7.147642715192511 3.467874862246568 0 2.004432191740108 0.0 0.0 0.0 RPR{[HG]|PP}PP{[HG]|PP};RPR[YK]P{[HG]|PP};PRR{[HG]|PP}PP{[HG]|PP};PRR[YK]P{[HG]|PP};RPR{[HG]|PP}P[YK];RPR[YK][YK];PRR{[HG]|PP}P[YK];PRR[YK][YK];[RP]R[YK][YK] 3.6805;3.337;3.2598;2.9163;2.5435;2.2068;2.1228;1.7861;1.3318 -;-;+;-;-;-;-;-;- + 102 + 1 2.979 59634.7 1.0 523 3362 3886 HBL1_DMSO_200M_050219_2,3887 HBL1_DMSO_200M_050219_2,3887,PRRPPPPPP True True RRPPPPPPP 18.139549 505.798419177532 85427120.0 3886.0 nc|ENSG00000117560|P48023-2|FASLG;;ENST00000360947.7_1_14:21561312-21566652:-|nuORF;;ENSG00000099381|ENST00000262519|SETD1A;;ENSG00000117560|ENST00000367721|FASLG -0.4547506173451741 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3890 18.154 465.0 155800.0 25 0 11299.0 + 29359 QKEEQVFW 8 103 547.2671908507629 1092.5198287683256 2 547.2674438357353 MULTI CID FTMS 0 0 0 3889 228762.109375 0.5086977145324256 22 -0.1829566955566406 1 Unmodified _QKEEQVFW_ REV__ENSG00000108592|ENST00000427159|FTSJ3 16.942295170755138 0.6606234159769251 4 VR{M(Oxidation (M))|F}SSSKH 8 -1 39.897 0.0 0.0 3.6518 0.0 0.0 146.0679364297418 0.0 146.0679364297418 0.0 17.541367330877407 0.0 0.0 0 0.0 0.0 0.0 0.0 VR{M(Oxidation (M))|F}SSSKH 3.6518 - 606 + 1 2.979 65124.0 1.0 524 3364 3889 HBL1_DMSO_200M_050219_2,3890 HBL1_DMSO_200M_050219_2,3890,QKEEQVFW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3893 18.175 800.0 55377.0 25 0 2796.1 -1 0 47 753.9913609137789 2258.952253341537 3 754.3276244997978 MULTI CID FTMS 0 0 0 3892 73212.875 0.2739492420070971 -20 0.1248226165771484 1 4 VSQGT 5 -1 28.148 0.0 0.0 1.2461 0.0 0.0 1235.5270339884034 548.1847017877561 1783.7117357761597 0.0 0.0 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 VSQGT 1.2461 - 161 + 1 2.979 40258.5 0.3799999952316284 525 3366 3892 HBL1_DMSO_200M_050219_2,3893 HBL1_DMSO_200M_050219_2,3893, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3895 18.191 800.0 103720.0 25 0 11168.0 + 17613 KPTAAFHLL 9 102 499.2932755692178 996.5719982052356 2 499.2928954958916 MULTI CID FTMS 0 0 0 3894 70139.0859375 0.2197255460512558 28 -0.188507080078125 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 4 KPT 3 -1 37.224 0.0 0.0 3.7352 0.0 0.0 0.0 667.3526529574762 667.3526529574762 22.619478172486467 0.0 0.0 0.0 0 0.8807196863200843 0.0 1.0 0.0 KPT 3.7352 + + 34 + 1 2.979 67188.4 0.4199999868869781 526 3367 3894 HBL1_DMSO_200M_050219_2,3895 HBL1_DMSO_200M_050219_2,3895,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3899 18.204 84.0 506580.0 25 0 50083.0 + 3583 DAAHAQTEV 9 68 471.2197856352927 940.4250183373854 2 471.2198364138603 MULTI CID FTMS 0 0 0 3898 756336.4375 0.8041784723963394 9 -0.0632438659667968 1 Unmodified _DAAHAQTEV_ ENSG00000154174|ENST00000284320|TOMM70 24.020572477871973 0.2255576514309169 4 {[DA]|[EG]}[HA]AQTEV 9 0 + 41.277 0.0 0.0 4.3892 4.3892 79.087 0.0 0.0 0.0 9.488474775526182 9.577570906191896 9.488474775526182 9.208187539523747 0 0.3935078169319297 1.6989700043360187 0.5 0.0 + + {[DA]|[EG]}[HA]AQTEV;{[DA]|[EG]}[HA]A[AG]TEV;[HA]ADAQTEV;[HA]ADA[AG]TEV;[HA]ASA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EV 4.3892;3.41;3.3802;2.4011;0.26863 +;-;-;-;- + 101 1 2.979 40000.5 1.0 527 3370 3898 HBL1_DMSO_200M_050219_2,3899 HBL1_DMSO_200M_050219_2,3899,DAAHAQTEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3905 18.225 27.0 1865900.0 25 0 295180.0 + -1 IQRLETMK 8 63 517.7861103411734 1033.5576677491467 2 517.7870361208916 MULTI CID FTMS 0 0 0 3904 2046504.25 0.0117133544417863 77 -0.7424335479736328 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 4 KTT[{I|L}P][WP]K 8 -1 45.367 0.0 0.0 4.3894 0.0 0.0 63.997371694637486 0.0 63.997371694637486 0.0 34.397737521010825 0.0 0.0 0 0.9247425010840048 0.0 1.274227503252014 0.2742275032520141 KTT[{I|L}P][WP]K 4.3894 - 62 + 1 2.979 47312.9 1.0 528 3375 3904 HBL1_DMSO_200M_050219_2,3905 HBL1_DMSO_200M_050219_2,3905,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3907 18.23 44.0 1129700.0 25 0 153570.0 + 24809 MPKAEKNAV 9 83 329.8480664344811 986.5223699036432 3 329.8477661013603 MULTI CID FTMS 0 0 0 3906 1177896.125 0.3135648385085189 -30 0.1915569305419922 1 Unmodified _MPKAEKNAV_ ENSG00000125877|ENST00000380113|ITPA;ENST00000472295.1_1_20:3202423-3204105:+|nuORF;ENST00000490838.6_1_20:3193963-3204105:+|nuORF;nc|ENSG00000125877|Q9BY32-2|ITPA;nc|ENSG00000125877|Q9BY32-3|ITPA 27.628801355627647 0.1796483985696185 4 MPKAE 5 4 35.49 0.0 0.0 3.5974 0.0 0.0 0.0 427.2319429986938 427.2319429986938 12.474250108400469 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + MPKAE 3.5974 + + 74 + 1 2.979 49557.2 1.0 529 3376 3906 HBL1_DMSO_200M_050219_2,3907 HBL1_DMSO_200M_050219_2,3907,MPKAEKNAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3908 18.244 800.0 82822.0 25 0 8162.8 + 3678 DAEPHQRVV 9 92 525.7693759524981 1049.524198971796 2 525.7704955935478 MULTI CID FTMS 0 0 0 3906 83955.3828125 0.7877127302271536 -29 0.1738567352294922 2 Unmodified _DAEPHQRVV_ ENSG00000196976|ENST00000357360|LAGE3 31.26834338654808 0.1333407332142048 4 {[DA]|[EG]}E[RK]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV 9 4 + 37.342 0.0 0.0 3.558 3.558 81.105 0.0 0.0 0.0 10.761518613495518 26.70696227168976 10.761518613495518 37.34182484690081 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}E[RK]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV 3.558 - 43 1 2.979 54620.0 0.4000000059604645 530 3376 3906 HBL1_DMSO_200M_050219_2,3908 HBL1_DMSO_200M_050219_2,3908,DAEPHQRVV False True DAEPHQRVV 18.24399 525.770495593548 3689675.625 3906.0 ENSG00000196976|ENST00000357360|LAGE3 5.198270320892334 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3910 18.258 682.0 99651.0 25 0 6542.7 + 3646 DAEMTTRMV 9 117 543.2336422986572 1084.4527316641145 2 543.2335082888603 MULTI CID FTMS 0 0 0 3909 143582.46875 0.3701719481074026 41 -0.3126220703125 1 2 Oxidation (M) _DAEM(Oxidation (M))TTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 45.69961567697781 0.0497987121815769 4 {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V 9 0 + 73.102 0.0 0.0 6.7409 6.7409 93.174 0.0 0.0 0.0 38.72608801015146 5.942124970647029 5.942124970647029 33.78843054889667 0 0.9247425010840048 2.0 0.7302046884880937 0.0 + + {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V;{[DA]|[EG]}[YR]VTE[EC];{[DA]|[EG]}E{NN|[MP]|[D{I|L}]|[EV]}RG[Y{M(Oxidation (M))|F}];{[DA]|[EG]}E[EP]AAH{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}RT{M(Oxidation (M))|F}TE[EC];{[TV]|[{I|L}S]}RTT{M(Oxidation (M))|F}E[EC];{[DA]|[EG]}E{[QV]|[N{I|L}]|[RA]|[KV]}[DV][Y{M(Oxidation (M))|F}];{[DA]|[EG]}E{NN|[MP]|[D{I|L}]|[EV]}[VG]G[Y{M(Oxidation (M))|F}];{[DA]|[EG]}[QA]R{NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C))H];[YT]RT[PS]E[EC] 6.7409;3.6252;3.5034;3.4735;2.8095;2.8095;2.6729;2.6543;2.6071;2.2802 +;-;-;-;-;-;-;-;-;- + 831 + 1 2.979 57643.2 1.0 531 3377 3909 HBL1_DMSO_200M_050219_2,3910 HBL1_DMSO_200M_050219_2,3910,DAEMTTRMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3916 18.282 282.0 266910.0 25 0 12718.0 + 38399 TRATPSAAFL 10 92 345.5271286564371 1033.5595565695114 3 345.5268432497978 MULTI CID FTMS 0 0 0 3915 218640.234375 0.0086306988693417 84 -0.7632255554199219 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 20.41453444215458 0.5050059513928961 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 34.297 16.995 3.9593 3.3183 3.3183 46.701 0.0 0.0 0.0 0.0 21.025684359364405 0.0 0.0 0 0.5 0.0 0.7614393726401688 0.1505149978319906 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 3.3183 - 114 + 1 2.979 70840.7 1.0 532 3382 3915 HBL1_DMSO_200M_050219_2,3916 HBL1_DMSO_200M_050219_2,3916,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3917 18.289 374.0 228160.0 25 0 29821.0 + 14381 IFDPKHKKL 9 99 375.8962318505956 1124.6668661519868 3 375.8958923220634 MULTI CID FTMS 0 0 0 3915 120136.390625 0.4437149477939913 -28 0.1952247619628906 2 Unmodified _IFDPKHKKL_ REV__ENSG00000155561|ENST00000285968|NUP205 10.150570793230772 0.5619192000662246 4 {I|L} 1 -1 18.979 0.0 0.0 1.6876 0.0 0.0 993.5719545082352 0.0 993.5719545082352 0.0 5.167118777434752 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 1.6876 + + 58 + 1 2.979 72550.0 1.0 533 3382 3915 HBL1_DMSO_200M_050219_2,3917 HBL1_DMSO_200M_050219_2,3917,IFDPKHKKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3918 18.303 800.0 94156.0 25 0 29436.0 + 15481 IPSERQRQV 9 67 556.8120899832599 1111.6096270333196 2 556.8127929568291 MULTI CID FTMS 0 0 0 3915 86722.0 0.8781523102055669 -3 0.0119876861572265 3 Unmodified _IPSERQRQV_ ENSG00000140968|ENST00000268638|IRF8 11.640296217721598 0.521594087909532 4 VKS 3 8 27.945 0.0 0.0 2.514 0.0 0.0 0.0 794.3955782525999 794.3955782525999 24.84636880228201 0.0 0.0 0.0 0 0.1747425010840047 0.0 0.0 0.0 VKS 2.514 - 23 + 1 2.979 65340.5 0.4199999868869781 534 3382 3915 HBL1_DMSO_200M_050219_2,3918 HBL1_DMSO_200M_050219_2,3918,IPSERQRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3920 18.318 667.0 101430.0 25 0 8197.3 + 6225 DTNADKQL 8 99 452.72165373582 903.42875453844 2 452.7222167849541 MULTI CID FTMS 0 0 0 3919 118996.8671875 0.8529121737155472 -3 0.0364418029785156 1 Unmodified _DTNADKQL_ ENSG00000163220|ENST00000368738|S100A9 53.832793166522166 0.1212192986213991 4 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L} 8 0 + 38.536 0.0 0.0 4.2655 4.2655 74.391 0.0 0.0 0.0 6.989700043360188 5.698753079565613 5.698753079565613 5.698753079565613 0 1.079689690656103 0.0 0.0 0.3494850021680094 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L};{[ES]|[DT]|[{I|L}C]}NADK{I|L}Q;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L};{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L};{[ES]|[DT]|[{I|L}C]}GGADK{I|L}Q;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L} 4.2655;3.6348;3.2403;2.8535;2.6095;1.8342 +;-;-;-;-;- + 361 + 1 2.979 57399.0 1.0 535 3383 3919 HBL1_DMSO_200M_050219_2,3920 HBL1_DMSO_200M_050219_2,3920,DTNADKQL True True DTNADKQL 18.318254 452.722216784954 3652756.0 3919.0 ENSG00000163220|ENST00000368738|S100A9 4.797778288523356 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3926 18.339 68.0 692270.0 25 0 61715.0 + 24811 MPKAEKNAV 9 81 494.2683238323901 986.5220947315802 2 494.2684814333916 MULTI CID FTMS 0 0 0 3925 827421.625 0.5949178953513997 -16 0.1262340545654297 1 Unmodified _MPKAEKNAV_ ENSG00000125877|ENST00000380113|ITPA;ENST00000472295.1_1_20:3202423-3204105:+|nuORF;ENST00000490838.6_1_20:3193963-3204105:+|nuORF;nc|ENSG00000125877|Q9BY32-2|ITPA;nc|ENSG00000125877|Q9BY32-3|ITPA 47.594388314883695 0.0456443387682827 4 MPKAE 5 4 58.293 0.0 0.0 5.909 0.0 0.0 0.0 427.2309054010376 427.2309054010376 26.845574081009048 0.0 0.0 0.0 0 1.1382104921644451 1.5228787452803376 0.0 0.0 + MPKAE 5.909 + + 263 + 1 2.979 41712.2 1.0 536 3388 3925 HBL1_DMSO_200M_050219_2,3926 HBL1_DMSO_200M_050219_2,3926,MPKAEKNAV True True MPKAEKNAV 18.339087 494.268481433392 64682896.0 3925.0 ENST00000472295.1_1_20:3202423-3204105:+|nuORF;;ENST00000490838.6_1_20:3193963-3204105:+|nuORF;;nc|ENSG00000125877|Q9BY32-3|ITPA;;nc|ENSG00000125877|Q9BY32-2|ITPA;;ENSG00000125877|ENST00000380113|ITPA 7.1139655113220215 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3936 18.377 149.0 536020.0 25 0 98758.0 17515 KPIPRPGNKF 10 83 385.2316014155408 1152.6729748468224 3 385.2314941287041 MULTI CID FTMS 0 0 0 3935 283924.40625 0.6129707378319428 -5 0.0200481414794921 1 Unmodified _KPIPRPGNKF_ ENSG00000144285|ENST00000674923|SCN1A;nc|ENSG00000144285|P35498-2|SCN1A;nc|ENSG00000144285|P35498-3|SCN1A 10.073929032068715 0.6785112666868882 4 K{I|L} 2 8 24.776 0.0 0.0 2.1495 0.0 0.0 0.0 908.4700469662062 908.4700469662062 15.172203223519531 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 K{I|L} 2.1495 - 16 + 1 2.979 67377.3 1.0 537 3397 3935 HBL1_DMSO_200M_050219_2,3936 HBL1_DMSO_200M_050219_2,3936,KPIPRPGNKF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3940 18.397 532.0 231160.0 25 0 67727.0 + 28311 PRRPPPPPP 9 96 505.79833978216 1009.58212663112 2 505.7986328005791 MULTI CID FTMS 0 0 0 3939 211608.859375 0.4771266148377825 65 -0.6473045349121094 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 85.35673624503755 0.0162188719545379 4 RPRPPPPPP 9 2 + 57.048 0.0 0.0 5.6507 5.6507 72.757 0.0 0.0 0.0 31.130449684300103 1.429375632440582 1.429375632440582 1.2371250542002343 0 2.3737125054200234 0.0 0.0 0.0 RPRPPPPPP;PRRPPPPPP;[RP]R[YK]PPP;RPR[YK]PPP;PRR[YK]PPP;RPRPPP[YK];PRRPPP[YK];[RP][YK]RPPP;RPR[YK][YK];RPRP[YK]PP 5.6507;5.5281;4.6794;4.3951;4.2725;4.2421;4.1196;4.0306;2.9933;2.9546 -;+;-;-;-;-;-;-;-;- + 431 + 1 2.979 99002.3 1.0 538 3400 3939 HBL1_DMSO_200M_050219_2,3940 HBL1_DMSO_200M_050219_2,3940,PRRPPPPPP True True RPPRPPPPP 18.396581 505.798632800579 85234488.0 3939.0 ENSG00000142235|ENST00000600059|LMTK3 1.6675251523653667 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3941 18.41 800.0 53423.0 25 0 4565.9 + 27288 PHIFDCLLSAN 11 72 615.3042205032156 1228.593888073231 2 615.3042480349541 MULTI CID FTMS 0 0 0 3939 87985.59375 0.6740052948959738 -10 0.0415496826171875 2 Unmodified _PHIFDCLLSAN_ REV__ENST00000424710.5_1_7:120496852-120497216:-|nuORF 24.99096001346401 0.505407273373304 4 DP[WK][PS]QSAN 10 -1 50.807 0.0 0.0 4.1354 0.0 0.0 100.06414992500156 0.0 100.06414992500156 0.0 33.8173657553704 0.0 0.0 0 1.3807196863200843 0.0 1.6989700043360187 0.0 DP[WK][PS]QSAN 4.1354 - 120 1 2.979 37002.2 0.4199999868869781 539 3400 3939 HBL1_DMSO_200M_050219_2,3941 HBL1_DMSO_200M_050219_2,3941,PHIFDCLLSAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3944 18.423 333.0 149370.0 25 0 9257.2 -1 0 60 753.9913609137789 2258.952253341537 3 754.3264037966728 MULTI CID FTMS 0 0 0 3943 182354.375 0.6823368541110827 16 -0.1421566009521484 1 4 VSQGT[SG]H[HD] 10 -1 34.926 0.0 0.0 1.5461 0.0 0.0 1235.5288673969756 0.0 1235.5288673969756 0.0 27.936457164228443 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 VSQGT[SG]H[HD] 1.5461 - 468 + 1 2.979 44043.7 1.0 540 3402 3943 HBL1_DMSO_200M_050219_2,3944 HBL1_DMSO_200M_050219_2,3944, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3947 18.443 800.0 117060.0 25 0 20628.0 + 34998 SQMSGSREV 9 88 490.726669295686 979.438785658172 2 490.7278015017509 MULTI CID FTMS 0 0 0 3946 93848.78125 0.4856318960418594 -14 0.0839653015136718 1 Unmodified _SQMSGSREV_ ENSG00000140471|ENST00000314742|LINS1;ENST00000559149.5_1_15:101113500-101121059:-|nuORF;ENST00000561073.1_1_15:101116892-101121059:-|nuORF;nc|ENSG00000140471|Q8NG48-2|LINS1;nc|ENSG00000140471|Q8NG48-3|LINS1 36.506200033944 0.094635877243972 4 {[QS]|[NT]}MS[SG]VVW 9 3 + 55.613 0.0 0.0 5.678 5.678 74.675 0.0 0.0 0.0 37.653719392558 3.512649075511192 3.512649075511192 2.096142931993441 0 0.9247425010840048 1.154901959985743 0.8494850021680094 0.0 {[QS]|[NT]}MS[SG]VVW;{[QS]|[NT]}MS[WR]W;{[QS]|[NT]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KQ]{[QS]|[NT]};{[CT]|[{M(Oxidation (M))|F}G]}VWG{[CP]|[EA]}{[QS]|[NT]};{[CT]|[{M(Oxidation (M))|F}G]}VW{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QS]|[NT]} 5.678;5.464;1.3454;0.90052;0.2391 -;-;-;-;- 175 + 1 2.979 76307.2 0.4399999976158142 541 3404 3946 HBL1_DMSO_200M_050219_2,3947 HBL1_DMSO_200M_050219_2,3947,SQMSGSREV True True SQMSGSREV 18.443466 490.727801501751 910083.6875 3946.0 ENSG00000140471|ENST00000314742|LINS1;;ENST00000561073.1_1_15:101116892-101121059:-|nuORF;;nc|ENSG00000140471|Q8NG48-3|LINS1;;ENST00000559149.5_1_15:101113500-101121059:-|nuORF;;nc|ENSG00000140471|Q8NG48-2|LINS1 4.0177552700042725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3951 18.466 635.0 115340.0 25 0 16597.0 + 3584 DAAHAQTEV 9 97 471.2197856352927 940.4250183373854 2 471.2197143435478 MULTI CID FTMS 0 0 0 3950 95506.390625 0.1015476440230351 46 -0.5276298522949219 1 Unmodified _DAAHAQTEV_ ENSG00000154174|ENST00000284320|TOMM70 24.020572477871973 0.2255576514309169 4 {[DA]|[EG]}[HA]AQTEV 9 0 + 34.131 0.0 0.0 3.6293 3.6293 76.5 0.0 0.0 0.0 10.280287236002431 9.577570906191896 9.577570906191896 9.208187539523747 0 0.3935078169319297 1.5228787452803376 0.7396518287104438 0.0 + + {[DA]|[EG]}[HA]AQTEV;{[DA]|[EG]}[HA]A[AG]TEV;[HA]ADAQTEV;[HA]QEQTEV;[HA]AGEQTEV;[HA]ADA[AG]TEV;[HA]QE[AG]TEV;[HA]AGE[AG]TEV;[HA]AS[QA]EEV;[HA]Q[QT]EEV 3.6293;2.6502;2.5362;1.8199;1.6813;1.557;0.83501;0.70216;0.50454;0.27901 +;-;-;-;-;-;-;-;-;- + 143 1 2.979 62660.6 1.0 542 3407 3950 HBL1_DMSO_200M_050219_2,3951 HBL1_DMSO_200M_050219_2,3951,DAAHAQTEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3955 18.479 63.0 864900.0 25 0 148920.0 + -1 IQRLETMK 8 70 517.7861103411734 1033.5576677491467 2 517.7869140505791 MULTI CID FTMS 0 0 0 3954 883124.375 0.0050546432144257 112 -1.1073246002197266 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 4 KTT[{I|L}P][WP]K 8 -1 39.601 0.0 0.0 3.8315 0.0 0.0 63.99745410425687 0.0 63.99745410425687 0.0 18.978174818886373 0.0 0.0 0 0.8494850021680094 0.0 1.274227503252014 0.25 KTT[{I|L}P][WP]K 3.8315 - 153 + 1 2.979 48536.2 1.0 543 3410 3954 HBL1_DMSO_200M_050219_2,3955 HBL1_DMSO_200M_050219_2,3955,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3957 18.484 17.0 2901400.0 25 0 429510.0 + 24810 MPKAEKNAV 9 71 329.8480664344811 986.5223699036432 3 329.8478271365166 MULTI CID FTMS 0 0 0 3956 3064224.0 0.8157195556729827 5 -0.0471649169921875 1 Unmodified _MPKAEKNAV_ ENSG00000125877|ENST00000380113|ITPA;ENST00000472295.1_1_20:3202423-3204105:+|nuORF;ENST00000490838.6_1_20:3193963-3204105:+|nuORF;nc|ENSG00000125877|Q9BY32-2|ITPA;nc|ENSG00000125877|Q9BY32-3|ITPA 24.020572477871973 0.2255576514309169 4 MPK 3 6 27.435 0.0 0.0 2.781 0.0 0.0 0.0 627.3094809525753 627.3094809525753 14.670802793795268 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + MPK 2.781 + + 49 + 1 2.979 45335.3 1.0 544 3411 3956 HBL1_DMSO_200M_050219_2,3957 HBL1_DMSO_200M_050219_2,3957,MPKAEKNAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3961 18.508 800.0 166690.0 25 0 15244.0 + 23931 LVQLCALKGW 10 137 377.5511350502336 1129.6315757509008 3 377.5510131716728 MULTI CID FTMS 0 0 0 3960 64482.6953125 0.3814509711817237 -8 0.0445728302001953 1 Unmodified _LVQLCALKGW_ REV__ENSG00000144031|ENST00000360589|ANKRD53;REV__nc|ENSG00000144031|Q8N9V6-2|ANKRD53 8.97624648632007 0.6851160995914376 4 {I|L}DV 3 -1 26.198 0.0 0.0 2.3192 0.0 0.0 0.0 799.42676041918 799.42676041918 10.713337517843655 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DV 2.3192 - 200 + 1 2.979 108545.6 0.3899999856948852 545 3414 3960 HBL1_DMSO_200M_050219_2,3961 HBL1_DMSO_200M_050219_2,3961,LVQLCALKGW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3962 18.522 800.0 95576.0 25 0 8663.7 + 3679 DAEPHQRVV 9 96 525.7693759524981 1049.524198971796 2 525.7698852419853 MULTI CID FTMS 0 0 0 3960 97527.2734375 0.9150512124116614 9 -0.154754638671875 2 Unmodified _DAEPHQRVV_ ENSG00000196976|ENST00000357360|LAGE3 29.081581746732265 0.1611639662936252 4 {[DA]|[EG]}EP{I|L}S 6 5 37.937 0.0 0.0 3.6147 0.0 0.0 0.0 434.2251909973149 434.2251909973149 18.104028237526748 0.0 0.0 0.0 0 1.274227503252014 1.6989700043360187 0.3054621874040891 0.0 {[DA]|[EG]}EP{I|L}S 3.6147 - 165 1 2.979 62601.9 0.4300000071525574 546 3414 3960 HBL1_DMSO_200M_050219_2,3962 HBL1_DMSO_200M_050219_2,3962,DAEPHQRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3965 18.541 679.0 201980.0 25 0 6959.4 + 38400 TRATPSAAFL 10 159 345.5271286564371 1033.5595565695114 3 345.5274841189384 MULTI CID FTMS 0 0 0 3964 124331.65625 0.0049079213992233 118 -1.2376708984375 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 20.41453444215458 0.5050059513928961 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 25.124 0.0 0.0 2.4309 0.0 0.0 0.0 601.3046839318482 601.3046839318482 2.71550397230838 0.0 0.0 0.0 0 0.5 0.0 0.555462187404089 0.1382104921644452 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 2.4309 + + 280 1 2.979 119685.3 1.0 547 3416 3964 HBL1_DMSO_200M_050219_2,3965 HBL1_DMSO_200M_050219_2,3965,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3966 18.552 687.0 163690.0 25 0 11245.0 + 3680 DAEPHQRVV 9 135 350.84898927837315 0 350.8489257693291 PEAK CID FTMS 0 0 0 3964 88825.9453125 0.8129872501593838 9 -0.1480083465576172 2 Unmodified _DAEPHQRVV_ ENSG00000196976|ENST00000357360|LAGE3 20.453626601364224 0.1969592619112565 4 HQ 2 7 9.2525 0.0 0.0 1.3224 0.0 0.0 62.317410136502026 369.22519861392817 431.5426087504302 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 + HQ 1.3224 + + 30 + 1 2.979 95909.9 1.0 548 3416 3964 HBL1_DMSO_200M_050219_2,3966 HBL1_DMSO_200M_050219_2,3966,DAEPHQRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3969 18.566 389.0 203290.0 25 0 19617.0 + 5874 DPYGGHRDV 9 100 508.2332247096735 1014.451896486147 2 508.2334777712822 MULTI CID FTMS 0 0 0 3968 184257.21875 0.1620248031129527 -15 0.1335659027099609 1 Unmodified _DPYGGHRDV_ ENSG00000123066|ENST00000281928|MED13L 62.86856922530385 0.024493861581232 4 DPYGGHK{[QN]|[E{I|L}]|[KN]} 9 3 + 74.548 0.0 0.0 7.3486 7.3486 85.665 0.0 0.0 0.0 18.239087409443187 5.228787452803374 5.228787452803374 5.228787452803374 0 1.1382104921644451 1.6989700043360187 0.3494850021680094 0.3807196863200844 DPYGGHK{[QN]|[E{I|L}]|[KN]};DPYGGHR[DV];DPYNHK{[QN]|[E{I|L}]|[KN]};DPYG[HK]G{[QN]|[E{I|L}]|[KN]};DPYGG[RV][HD];DPYNHR[DV];DPYV[RN][HD];DPYN[RV][HD];DPVY[RN][HD];DVPY[RN][HD] 7.3486;6.8331;6.4254;6.2343;6.0661;5.9099;5.4961;5.1429;4.7329;3.7208 -;+;-;-;-;-;-;-;-;- + 384 + 1 2.979 67137.5 1.0 549 3418 3968 HBL1_DMSO_200M_050219_2,3969 HBL1_DMSO_200M_050219_2,3969,DPYGGHRDV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3970 18.579 720.0 203200.0 25 0 20219.0 + 14382 IFDPKHKKL 9 146 375.8962318505956 1124.6668661519868 3 375.8960449099541 MULTI CID FTMS 0 0 0 3968 149722.109375 0.5529876301370227 8 -0.121652603149414 2 Unmodified _IFDPKHKKL_ REV__ENSG00000155561|ENST00000285968|NUP205 14.40537977576856 0.4467465336100671 4 TP[RK]{I|L} 5 -1 20.094 0.0 0.0 1.7866 0.0 0.0 511.2883167951188 0.0 511.2883167951188 0.0 6.598878259206842 0.0 0.0 0 0.3807196863200844 0.0 0.2614393726401688 0.3494850021680094 TP[RK]{I|L} 1.7866 - 251 1 2.979 119329.9 1.0 550 3418 3968 HBL1_DMSO_200M_050219_2,3970 HBL1_DMSO_200M_050219_2,3970,IFDPKHKKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3971 18.592 800.0 77690.0 25 0 5278.6 + 6226 DTNADKQL 8 102 452.72165373582 903.42875453844 2 452.7221252322197 MULTI CID FTMS 0 0 0 3968 100653.703125 0.7214372172470191 32 -0.3979396820068359 3 Unmodified _DTNADKQL_ ENSG00000163220|ENST00000368738|S100A9 62.57269311338072 0.1158273023829763 4 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L} 8 0 {[ES]|[DT]|[{I|L}C]}N + + 37.906 10.686 3.2371 4.1958 4.1958 49.351 0.0 0.0 0.0 0.0 20.115618994235685 0.0 0.0 0 1.024227503252014 0.0 0.0 0.9247425010840048 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L} 4.1958 + + 266 + 1 2.979 52486.7 0.449999988079071 551 3418 3968 HBL1_DMSO_200M_050219_2,3971 HBL1_DMSO_200M_050219_2,3971,DTNADKQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3973 18.598 165.0 263230.0 25 0 19966.0 + 24812 MPKAEKNAV 9 85 494.2683238323901 986.5220947315802 2 494.2682067751884 MULTI CID FTMS 0 0 0 3972 316381.34375 0.2274788541479052 15 -0.1359500885009765 1 Unmodified _MPKAEKNAV_ ENSG00000125877|ENST00000380113|ITPA;ENST00000472295.1_1_20:3202423-3204105:+|nuORF;ENST00000490838.6_1_20:3193963-3204105:+|nuORF;nc|ENSG00000125877|Q9BY32-2|ITPA;nc|ENSG00000125877|Q9BY32-3|ITPA 29.84058131909904 0.1515068451768857 4 MPKAE 5 4 61.599 0.0 0.0 6.244 0.0 0.0 0.0 427.2327974908813 427.2327974908813 48.9350781693193 0.0 0.0 0.0 0 0.9916440611282626 1.5228787452803376 0.0 0.0 + MPKAE 6.244 + + 178 + 1 2.979 42129.7 1.0 552 3419 3972 HBL1_DMSO_200M_050219_2,3973 HBL1_DMSO_200M_050219_2,3973,MPKAEKNAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3974 18.6 86.0 926850.0 25 0 359790.0 + 5876 DPYGGHRDV 9 87 339.15732383839884 1014.4501421153966 3 339.1558410525322 MULTI CID FTMS 0 0 0 3972 743374.625 0.6770273033284213 -13 0.1450920104980468 2 Unmodified _DPYGGHRDV_ ENSG00000123066|ENST00000281928|MED13L 5.40270961882225 0.7260783106465734 4 [DP]YV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM} 8 5 + 34.895 0.0 0.0 3.4398 3.4398 47.02 0.0 0.0 0.0 27.904849854573683 1.9627248839266545 1.9627248839266545 0.0 0 0.0 1.5228787452803376 0.0 0.0 [DP]YV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM};[DP]VY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM};[DP]VY[RN][HD];[DP]YV[RN][HD];[EP][WQ]YV{[HG]|PP};[EP][WQ]VY{[HG]|PP} 3.4398;3.4398;3.143;3.143;1.2193;1.2193 -;-;-;-;-;- 63 + 1 2.979 71306.5 1.0 553 3419 3972 HBL1_DMSO_200M_050219_2,3974 HBL1_DMSO_200M_050219_2,3974,DPYGGHRDV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3975 18.606 297.0 300570.0 25 0 27095.0 30299 QYQNRRAL 8 119 350.1938105051128 1047.5596021155384 3 350.1931030154228 MULTI CID FTMS 0 0 0 3972 97193.7421875 0.6571956452491345 -2 0.0399971008300781 3 Unmodified _QYQNRRAL_ ENSG00000114209|ENST00000392750|PDCD10 13.90604991867851 0.7054780292895731 4 QQC(Carbamidomethyl (C)){I|L} 4 5 35.852 0.0 0.0 3.4224 0.0 0.0 500.30699739453166 0.0 500.30699739453166 0.0 18.40450305110869 0.0 0.0 0 0.1923877696554315 0.0 0.0 0.5 QQC(Carbamidomethyl (C)){I|L} 3.4224 - 72 1 2.979 74779.6 1.0 554 3419 3972 HBL1_DMSO_200M_050219_2,3975 HBL1_DMSO_200M_050219_2,3975,QYQNRRAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3976 18.618 706.0 108590.0 25 0 13044.0 + 25353 NAPEEKASV 9 99 472.737822456899 943.461091980598 2 472.7381774783134 MULTI CID FTMS 0 0 0 3972 93728.0625 0.7010154247803847 -7 0.1086463928222656 4 Unmodified _NAPEEKASV_ ENSG00000120742|ENST00000239944|SERP1 26.268140514670165 0.1969607489560049 4 {[QG]|[NA]}PEE[KA]SV 9 0 + 41.136 0.0 0.0 4.3601 4.3601 80.561 0.0 0.0 0.0 0.7692478837509142 1.8269918486336325 0.7692478837509142 10.876486537668644 0 0.4247425010840047 2.0 0.2742275032520141 0.0 + + {[QG]|[NA]}PEE[KA]SV;{[QG]|[NA]}V{[MG]|[TS]}T[PS]AP;{[QG]|[NA]}V{[MG]|[TS]}[DV]AAP;{[QG]|[NA]}V{[MG]|[TS]}{[RE]|[WV]}AP;{[QG]|[NA]}P[WQ]{[ET]|[MV]}V;{[QG]|[NA]}{[WT]|[RM]}T[PS]AP;{[QG]|[NA]}{[WT]|[RM]}[DV]AAP;{[QG]|[NA]}{[WT]|[RM]}{[RE]|[WV]}AP;[NP]AEE[KA]SV 4.3601;3.2073;2.8882;2.834;2.3041;2.0647;1.7457;1.6972;1.471 +;-;-;-;-;-;-;-;- + 206 + 1 2.979 63999.2 1.0 555 3419 3972 HBL1_DMSO_200M_050219_2,3976 HBL1_DMSO_200M_050219_2,3976,NAPEEKASV False True NAPEEKASV 18.617853 472.738177478313 773814.9375 3972.0 ENSG00000120742|ENST00000239944|SERP1 6.011376698811849 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3980 18.633 231.0 324640.0 25 0 60864.0 17296 KLRENQLPR 9 84 385.2316014155408 1152.6729748468224 3 385.2314025759697 MULTI CID FTMS 0 0 0 3979 170163.453125 0.3673696769914877 20 -0.2453575134277343 1 Unmodified _KLRENQLPR_ ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF 6.2057823575117 0.6980434486082533 4 K{I|L}T 3 7 32.945 0.0 0.0 2.8582 0.0 0.0 0.0 807.4291475885374 807.4291475885374 30.153631197717985 0.0 0.0 0.0 0 0.25 0.0 0.4247425010840047 0.0 K{I|L}T 2.8582 - 15 + 1 2.979 64396.0 1.0 556 3422 3979 HBL1_DMSO_200M_050219_2,3980 HBL1_DMSO_200M_050219_2,3980,KLRENQLPR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3981 18.647 800.0 54951.0 25 0 4546.8 -1 0 47 701.849233892333 3504.209787128665 5 702.2516967654228 MULTI CID FTMS 0 0 0 3979 57305.98046875 0.4660117385295403 1 -0.0207195281982421 2 4 P 1 -1 6.9897 0.0 0.0 0.19947 0.0 0.0 1358.5382722820666 2045.5739818101297 3404.112254092196 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.19947 - 7 + 1 2.979 42404.7 0.4799999892711639 557 3422 3979 HBL1_DMSO_200M_050219_2,3981 HBL1_DMSO_200M_050219_2,3981, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 3983 18.654 251.0 249760.0 25 0 68619.0 + 28312 PRRPPPPPP 9 76 505.79833978216 1009.58212663112 2 505.7983886599541 MULTI CID FTMS 0 0 0 3982 162863.484375 0.3672176260012972 88 -0.7939987182617188 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 34.10243960390752 0.1078313939113124 4 RPR{[HG]|PP}PPPP 9 2 + 37.43 0.0 0.0 3.7075 3.7075 65.254 0.0 0.0 0.0 15.169956787073303 3.700477395880711 3.700477395880711 1.2371250542002343 0 1.7306883134323936 0.0 0.0 0.0 RPR{[HG]|PP}PPPP;PRR{[HG]|PP}PPPP;RPR[YK]PPP;PRR[YK]PPP;RPR{[HG]|PP}P[YK];PRR{[HG]|PP}P[YK];RPR[YK][YK];P[KT]P[HK][R{M(Oxidation (M))|F}];PRR[YK][YK];[VG]{[VA]|[{I|L}G]}P[HK][R{M(Oxidation (M))|F}] 3.7075;3.585;3.0658;2.9433;2.2989;2.1764;1.6641;1.5979;1.5415;1.228 -;+;-;-;-;-;-;-;-;- + 130 + 1 2.979 54990.8 1.0 558 3423 3982 HBL1_DMSO_200M_050219_2,3983 HBL1_DMSO_200M_050219_2,3983,PRRPPPPPP True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3984 18.663 497.0 181050.0 25 0 19823.0 + 2006 APARPAPAA 9 92 411.23520826356827 820.4558635939366 2 411.2357360720634 MULTI CID FTMS 0 0 0 3982 106882.203125 0.2811162142411602 -29 0.2875595092773437 2 Unmodified _APARPAPAA_ REV__ENSG00000125533|ENST00000612929|BHLHE23;REV__nc|ENSG00000125533|Q8NDY6|BHLHE23 28.486842064014134 0.1687311288560894 4 APAA 4 -1 40.349 0.0 0.0 4.9179 0.0 0.0 492.279824265276 0.0 492.279824265276 0.0 21.7659970366416 0.0 0.0 0 0.9916440611282626 0.0 0.0 0.0 APAA 4.9179 + + 63 1 2.979 75225.8 1.0 559 3423 3982 HBL1_DMSO_200M_050219_2,3984 HBL1_DMSO_200M_050219_2,3984,APARPAPAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3985 18.67 419.0 141670.0 25 0 6337.4 + 8097 EPFLFSTLE 9 119 361.518656634383 1081.534140503349 3 361.5184509158134 MULTI CID FTMS 0 0 0 3982 83927.609375 0.8709839938641254 -3 0.0288467407226562 3 Unmodified _EPFLFSTLE_ REV__ENST00000331203.6_1_2:112945098-112945467:+|nuORF 10.823927491677226 0.5436922275383211 4 V 1 -1 13.495 0.0 0.0 1.2478 0.0 0.0 964.4550445944608 0.0 964.4550445944608 0.0 -6.822581265925436 -6.822581265925436 0.0 0 0.0 0.0 0.0 0.0 V 1.2478 - 237 + 1 2.979 57092.6 1.0 560 3423 3982 HBL1_DMSO_200M_050219_2,3985 HBL1_DMSO_200M_050219_2,3985,EPFLFSTLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3990 18.692 392.0 316520.0 25 0 20607.0 + 21472 LPHNTHRVV 9 117 358.2052393067086 1071.593888520326 3 358.2053100466728 MULTI CID FTMS 0 0 0 3989 160571.21875 0.138055668073085 -21 0.2347869873046875 1 Unmodified _LPHNTHRVV_ ENSG00000197858|ENST00000355091|GPAA1;ENST00000529638.1_1_8:145140125-145141025:+|nuORF;ENST00000534072.1_1_8:145139936-145140713:+|nuORF;nc|ENSG00000197858|O43292-2|GPAA1 41.8396318013385 0.0653578398400075 4 {I|L}PHNT 5 4 67.413 0.0 0.0 6.2909 0.0 0.0 0.0 506.28344821392255 506.28344821392255 51.69953620924999 0.0 0.0 0.0 0 0.2887254899964357 1.0457574905606752 0.805462187404089 0.805462187404089 + {I|L}PHNT 6.2909 + + 78 + 1 2.979 104872.7 1.0 561 3427 3989 HBL1_DMSO_200M_050219_2,3990 HBL1_DMSO_200M_050219_2,3990,LPHNTHRVV True True LPHNTHRVV 18.691715 358.205310046673 18062370.625 3989.0 ENSG00000197858|ENST00000355091|GPAA1;;ENST00000534072.1_1_8:145139936-145140713:+|nuORF;;ENST00000529638.1_1_8:145140125-145141025:+|nuORF;;nc|ENSG00000197858|O43292-2|GPAA1 6.580915768941243 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 3996 18.724 800.0 143710.0 25 0 17314.0 + 21153 LPASKLRG 8 105 421.2666519528286 840.5187509724573 2 421.2663452029228 MULTI CID FTMS 0 0 0 3995 77091.0859375 0.3692332532452152 -10 0.0820178985595703 1 Unmodified _LPASKLRG_ REV__ENSG00000153162|ENST00000283147|BMP6 20.453626601364224 0.6087503291685402 4 {I|L}PAS 4 -1 54.285 0.0 0.0 6.4585 0.0 0.0 0.0 469.2909639947876 469.2909639947876 35.49926291259105 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.4247425010840047 0.0 {I|L}PAS 6.4585 + + 43 + 1 2.979 91812.9 0.4199999868869781 562 3432 3995 HBL1_DMSO_200M_050219_2,3996 HBL1_DMSO_200M_050219_2,3996,LPASKLRG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 3999 18.733 69.0 768810.0 25 0 128030.0 -1 TATRPITKM 9 69 517.7861103411734 1033.5576677491467 2 517.7869750857353 MULTI CID FTMS 0 0 0 3998 835087.0 0.0047796969005698 136 -1.570150375366211 1 Oxidation (M) _TATRPITKM(Oxidation (M))_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 14.40537977576856 0.4467465336100671 4 KTT[{I|L}P][WP]K 8 -1 43.522 0.0 0.0 4.2109 0.0 0.0 63.99708345090057 0.0 63.99708345090057 0.0 30.2512186568557 0.0 0.0 0 1.2614393726401687 0.0 1.274227503252014 0.2302046884880938 KTT[{I|L}P][WP]K 4.2109 - 87 + 1 2.979 49732.1 1.0 563 3434 3998 HBL1_DMSO_200M_050219_2,3999 HBL1_DMSO_200M_050219_2,3999,TATRPITKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4000 18.747 800.0 129040.0 25 0 7125.6 + 6070 DSLRHSPKV 9 151 346.86171134254744 1037.5633046278424 3 346.8610412478447 MULTI CID FTMS 0 0 0 3998 89129.1796875 0.7467286825602194 -1 0.0040607452392578 2 Unmodified _DSLRHSPKV_ ENSG00000101596|ENST00000320876|SMCHD1 39.21299971606389 0.0797768173001226 4 VC 2 9 23.366 0.0 0.0 2.252 0.0 0.0 0.0 832.4798916077145 832.4798916077145 4.865683949420124 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 VC 2.252 - 306 + 1 2.979 91104.1 0.3899999856948852 564 3434 3998 HBL1_DMSO_200M_050219_2,4000 HBL1_DMSO_200M_050219_2,4000,DSLRHSPKV True True DSLRHSPKV 18.747387 346.861041247845 890330.125 3998.0 ENSG00000101596|ENST00000320876|SMCHD1 5.774271170298259 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4002 18.764 800.0 135960.0 25 0 11732.0 + 5210 DIVMQKRQL 9 127 377.5511350502336 1129.6315757509008 3 377.5508300662041 MULTI CID FTMS 0 0 0 4001 53629.19921875 0.3172465112779606 13 -0.1927356719970703 1 Unmodified _DIVMQKRQL_ REV__ENSG00000138326|ENST00000372360|RPS24;REV__ENST00000465692.1_1_10:79795142-79808843:+|nuORF;REV__ENST00000466129.5_1_10:79793659-79795541:+|nuORF;REV__ENST00000473603.1_1_11:33258589-33258820:+|nuORF;REV__ENST00000478655.5_1_10:79793659-79797065:+|nuORF;REV__ENST00000485708.6_1_10:79793659-79797725:+|nuORF;REV__nc|ENSG00000138326|P62847-3|RPS24;REV__nc|ENSG00000138326|P62847-4|RPS24;REV__nc|ENSG00000138326|P62847|RPS24 4.189502756095605 0.7684307469601125 4 {I|L}D 2 -1 20.969 0.0 0.0 1.8563 0.0 0.0 0.0 898.4973890397528 898.4973890397528 8.20489028679166 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D 1.8563 - 72 + 1 2.979 90086.8 0.4300000071525574 565 3435 4001 HBL1_DMSO_200M_050219_2,4002 HBL1_DMSO_200M_050219_2,4002,DIVMQKRQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4005 18.784 800.0 109460.0 25 0 13283.0 + -1 KRRWNMMK 8 106 591.3041135727308 1180.5936742122617 2 591.3043701052666 MULTI CID FTMS 0 0 0 4004 66070.109375 0.1821705944005451 -29 0.3013267517089844 1 2 Oxidation (M) _KRRWNM(Oxidation (M))M(Oxidation (M))K_ REV__ENST00000344293.5_1_10:7866412-8006047:+|nuORF 12.531546534597751 0.7257836412119636 4 KT{M(Oxidation (M))|F}T[{I|L}P][WP]K 9 -1 41.251 0.0 0.0 3.4941 0.0 0.0 63.99773645929583 0.0 63.99773645929583 0.0 25.05326554173664 0.0 0.0 0 0.8252574989159953 0.0 1.2302046884880935 0.2614393726401688 KT{M(Oxidation (M))|F}T[{I|L}P][WP]K 3.4941 - 178 + 1 2.979 69895.0 0.4699999988079071 566 3437 4004 HBL1_DMSO_200M_050219_2,4005 HBL1_DMSO_200M_050219_2,4005,KRRWNMMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4006 18.798 800.0 148190.0 25 0 12455.0 + 8327 ERLQLSMFSA 10 130 394.53851389446686 1180.5937122836006 3 394.5387756228447 MULTI CID FTMS 0 0 0 4004 83561.078125 0.2144862585684667 -23 0.2757282257080078 2 Unmodified _ERLQLSMFSA_ REV__ENSG00000158486|ENST00000698260|DNAH3;REV__nc|ENSG00000158486|Q8TD57-2|DNAH3;REV__nc|ENSG00000158486|Q8TD57-3|DNAH3;REV__nc|ENSG00000158486|Q8TD57|DNAH3 13.90604991867851 0.6142120002215601 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 31.805 14.425 3.3606 2.694 2.694 45.378 0.0 0.0 0.0 0.0 17.970720647274966 0.0 0.0 0 0.805462187404089 0.0 0.9749073637206092 0.1050541008457974 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 2.694 - 326 + 1 2.979 99267.1 0.4000000059604645 567 3437 4004 HBL1_DMSO_200M_050219_2,4006 HBL1_DMSO_200M_050219_2,4006,ERLQLSMFSA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4008 18.816 800.0 193830.0 25 0 22656.0 + 38401 TRATPSAAFL 10 157 345.5271286564371 1033.5595565695114 3 345.5267516970634 MULTI CID FTMS 0 0 0 4007 133212.5 0.0052584876540164 140 -1.6262760162353516 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 15.248480904072842 0.5916873121453583 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 21.038 14.085 3.2815 2.0355 2.0355 44.62 0.0 0.0 0.0 0.0 11.43364607860605 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.1595680409956017 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.0355 - 215 + 1 2.979 130541.9 0.4099999964237213 568 3438 4007 HBL1_DMSO_200M_050219_2,4008 HBL1_DMSO_200M_050219_2,4008,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4010 18.82 74.0 691100.0 25 0 88654.0 + 5875 DPYGGHRDV 9 74 508.2332247096735 1014.451896486147 2 508.2334472537041 MULTI CID FTMS 0 0 0 4009 818196.9375 0.7194735631276773 6 -0.0727176666259765 1 Unmodified _DPYGGHRDV_ ENSG00000123066|ENST00000281928|MED13L 44.391923383255 0.0526658857881241 4 DPYGGHK{[QN]|[E{I|L}]|[KN]} 9 3 + 68.695 0.0 0.0 6.7716 6.7716 85.309 0.0 0.0 0.0 58.09221822150754 4.762036441594191 4.762036441594191 6.478174818886373 0 0.805462187404089 1.6989700043360187 0.0 0.3807196863200844 DPYGGHK{[QN]|[E{I|L}]|[KN]};DPYNHK{[QN]|[E{I|L}]|[KN]} 6.7716;6.133 -;- 108 + 1 2.979 48133.8 1.0 569 3439 4009 HBL1_DMSO_200M_050219_2,4010 HBL1_DMSO_200M_050219_2,4010,DPYGGHRDV True True DPYGGHRDV 18.820355 508.233447253704 20605742.5 4009.0 ENSG00000123066|ENST00000281928|MED13L 7.058157602945964 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4011 18.835 800.0 107120.0 25 0 12383.0 2208 AQAQAQAQV 9 103 457.73790526811774 913.4612576030356 2 457.7378417849541 MULTI CID FTMS 0 0 0 4009 95061.1640625 1.0 0 0.0 2 Unmodified _AQAQAQAQV_ ENSG00000113649|ENST00000679501|TCERG1;ENSG00000125107|ENST00000317147|CNOT1;ENSG00000167612|ENST00000301190|ANKRD33;ENST00000507175.5_1_5:145826912-145859658:+|nuORF;nc|ENSG00000113649|O14776-2|TCERG1;nc|ENSG00000113649|O14776|TCERG1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1;nc|ENSG00000167612|Q7Z3H0-1|ANKRD33;REV__ENSG00000113649|ENST00000679501|TCERG1;REV__ENST00000507175.5_1_5:145826912-145859658:+|nuORF;REV__nc|ENSG00000113649|O14776-2|TCERG1;REV__nc|ENSG00000113649|O14776|TCERG1 92.8221339359638 0.0138398038803217 4 [QA]AGAAQA{[QV]|[N{I|L}]|[RA]|[KV]} 10 2 + 61.484 0.0 0.0 6.7308 6.7308 75.237 0.0 0.0 0.0 0.348385950185893 7.269987279362624 0.348385950185893 0.348385950185893 0 0.5283773187068795 0.638272163982407 0.0 2.043157681736544 [QA]AGAAQA{[QV]|[N{I|L}]|[RA]|[KV]};[AG]AAQAQA{[QV]|[N{I|L}]|[RA]|[KV]};[AG]AQAAQA{[QV]|[N{I|L}]|[RA]|[KV]};[QA]AQAQA{[QV]|[N{I|L}]|[RA]|[KV]};[QA]QAAQA{[QV]|[N{I|L}]|[RA]|[KV]};[QA]AAGAQA{[QV]|[N{I|L}]|[RA]|[KV]};[AG]AAGAAQA{[QV]|[N{I|L}]|[RA]|[KV]};[QA]AGAA[AG]A{[QV]|[N{I|L}]|[RA]|[KV]};[AG]AAQA[AG]A{[QV]|[N{I|L}]|[RA]|[KV]};[AG]AQAA[AG]A{[QV]|[N{I|L}]|[RA]|[KV]} 6.7308;6.6927;6.5731;6.4648;6.0716;6.0399;5.8822;5.7276;5.6894;5.5699 -;-;-;+;-;-;-;-;-;- + 438 1 2.979 71778.8 0.449999988079071 570 3439 4009 HBL1_DMSO_200M_050219_2,4011 HBL1_DMSO_200M_050219_2,4011,AQAQAQAQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4012 18.848 800.0 26918.0 25 0 7155.4 -1 0 25 1028.0809213690072 3081.220934707222 3 1028.416674792767 MULTI CID FTMS 0 0 0 4009 86829.7421875 0.8475702244684711 -13 0.1373004913330078 3 4 V 1 -1 6.9897 0.0 0.0 0.22685 0.0 0.0 2617.030915031244 362.1092357128124 2979.1401507440564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.22685 - 2 + 1 2.979 31917.7 0.3300000131130218 571 3439 4009 HBL1_DMSO_200M_050219_2,4012 HBL1_DMSO_200M_050219_2,4012, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4015 18.857 97.0 674800.0 25 0 64070.0 + 5877 DPYGGHRDV 9 91 339.15732383839884 1014.4501421153966 3 339.1573364138603 MULTI CID FTMS 0 0 0 4014 530200.5625 0.482879351783883 9 -0.102203369140625 1 Unmodified _DPYGGHRDV_ ENSG00000123066|ENST00000281928|MED13L 9.243775137331635 0.591988661348691 4 DPYV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM} 8 5 + 57.863 0.0 0.0 5.7039 5.7039 55.527 0.0 0.0 0.0 39.284541873059695 2.0277122468424835 2.0277122468424835 0.0 0 0.2215141619232908 1.6989700043360187 0.3252574989159953 0.0 DPYV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM};DPVY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM};DPVY[RN][HD];DPYV[RN][HD];DPYGG[RV][HD];DPYN[RV][HD];DVPY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM};DVPY[RN][HD];DV{[MS]|[{M(Oxidation (M))|F}A]}G[VS]P[HS];DV{[MS]|[{M(Oxidation (M))|F}A]}G[RV][HD] 5.7039;5.7039;5.4072;5.4072;5.1317;4.7898;3.5141;3.2173;1.7109;1.3902 -;-;-;-;-;-;-;-;-;- 167 + 1 2.979 64702.1 1.0 572 3441 4014 HBL1_DMSO_200M_050219_2,4015 HBL1_DMSO_200M_050219_2,4015,DPYGGHRDV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4016 18.871 800.0 118200.0 25 0 10869.0 + 21474 LPHNTHRVV 9 109 536.804203766486 1071.593854599772 2 536.8043090701103 MULTI CID FTMS 0 0 0 4014 95587.921875 0.7450149124715465 -4 0.0846805572509765 2 Unmodified _LPHNTHRVV_ ENSG00000197858|ENST00000355091|GPAA1;ENST00000529638.1_1_8:145140125-145141025:+|nuORF;ENST00000534072.1_1_8:145139936-145140713:+|nuORF;nc|ENSG00000197858|O43292-2|GPAA1 47.74868867922204 0.0453060283459952 4 {I|L}PHNT 5 4 70.16 0.0 0.0 6.5472 0.0 0.0 0.0 506.28351770572505 506.28351770572505 57.68548670401452 0.0 0.0 0.0 0 0.6694451763165201 1.6989700043360187 0.4247425010840047 0.8494850021680094 + {I|L}PHNT 6.5472 + + 175 + 1 2.979 78592.6 0.4399999976158142 573 3441 4014 HBL1_DMSO_200M_050219_2,4016 HBL1_DMSO_200M_050219_2,4016,LPHNTHRVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4020 18.888 359.0 185440.0 25 0 12009.0 29946 QSLRPHGEGA 10 108 351.1811100616559 1050.5215007851675 3 351.1804992556572 MULTI CID FTMS 0 0 0 4019 111321.890625 0.7356496149884741 3 -0.0568103790283203 1 Unmodified _QSLRPHGEGA_ nc|ENSG00000186496|Q96N95-2|ZNF396 11.494710602746466 0.654671931888957 4 Q 1 9 15.485 0.0 0.0 1.474 0.0 0.0 104.05747503924484 815.380303077218 919.4377781164628 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.5 + Q 1.474 + + 56 + 1 2.979 59845.0 1.0 574 3444 4019 HBL1_DMSO_200M_050219_2,4020 HBL1_DMSO_200M_050219_2,4020,QSLRPHGEGA False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 4022 18.905 800.0 58675.0 25 0 3673.4 -1 0 55 701.849233892333 3504.209787128665 5 702.2523681521416 MULTI CID FTMS 0 0 0 4021 51428.234375 0.4182139580295219 24 -0.1738777160644531 1 4 PGH 3 -1 16.198 0.0 0.0 0.46224 0.0 0.0 1358.536681251487 1851.517444150336 3210.054125401823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PGH 0.46224 - 17 + 1 2.979 44409.5 0.3300000131130218 575 3445 4021 HBL1_DMSO_200M_050219_2,4022 HBL1_DMSO_200M_050219_2,4022, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4024 18.911 207.0 359770.0 25 0 55640.0 + 2089 APRAPAAPA 9 76 411.23520826356827 820.4558635939366 2 411.2352172732353 MULTI CID FTMS 0 0 0 4023 333498.5 0.8771510413708604 -6 0.0562801361083984 1 Unmodified _APRAPAAPA_ REV__ENSG00000181408|ENST00000313135|UTS2R;REV__ENST00000259883.3_1_6:28249363-28249588:+|nuORF 34.10243960390752 0.1078313939113124 4 [PA]RAPAPAA 9 -1 + 50.925 0.0 0.0 6.2069 6.2069 84.432 0.0 0.0 0.0 24.13734275855269 35.35187660689884 24.13734275855269 7.842932982563283 0 0.6822333069283655 1.6989700043360187 0.0 0.0 [PA]RAPAPAA;[PA]RAPAA[PA];[PA]RAPPAAA;[PA]{[QN]|[E{I|L}]|[KN]}[H{I|L}]AA 6.2069;5.251;5.2306;2.1898 -;+;-;- + 57 1 2.979 62660.8 1.0 576 3446 4023 HBL1_DMSO_200M_050219_2,4024 HBL1_DMSO_200M_050219_2,4024,APRAPAAPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4025 18.922 638.0 154030.0 25 0 42090.0 + 28313 PRRPPPPPP 9 101 505.79833978216 1009.58212663112 2 505.7989684939384 MULTI CID FTMS 0 0 0 4023 140368.484375 0.316496861131261 111 -1.180746078491211 2 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 36.04419817259434 0.0971720506436186 4 RPRPPPP{[HG]|PP} 9 2 + 38.554 0.0 0.0 3.8188 3.8188 71.106 0.0 0.0 0.0 13.193124368192464 3.424005240709043 3.424005240709043 4.247425010840047 0 1.4731975075880328 0.0 0.0 0.0 RPRPPPP{[HG]|PP};PRRPPPP{[HG]|PP};RPRPPP[YK];PRRPPP[YK];RPR[YK]P{[HG]|PP};RPRPP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};RPRP[YK]{[HG]|PP};PRR[YK]P{[HG]|PP};PRRPP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};PRRP[YK]{[HG]|PP} 3.8188;3.3981;3.2517;2.831;2.5126;2.385;2.1879;2.0919;1.9643;1.7672 -;+;-;-;-;-;-;-;-;- + 229 + 1 2.979 81016.8 1.0 577 3446 4023 HBL1_DMSO_200M_050219_2,4025 HBL1_DMSO_200M_050219_2,4025,PRRPPPPPP True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4026 18.936 800.0 153860.0 25 0 21408.0 -1 IIPLVMEMK 9 106 553.3051262420819 1104.5956995509637 2 553.3057739138603 MULTI CID FTMS 0 0 0 4023 110824.4296875 0.3639223434732843 -22 0.2345180511474609 3 2 Oxidation (M) _IIPLVM(Oxidation (M))EM(Oxidation (M))K_ ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-2|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A 21.74664581756881 0.2544899275067181 4 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 48.546 0.0 0.0 4.3949 4.3949 81.108 0.0 0.0 0.0 2.8663555045939475 23.02764671460736 2.8663555045939475 12.128493362984756 0 1.7302046884880935 0.0 1.048455006504028 0.2396518287104437 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K;{[WT]|[RM]}{[NV]|[RG]}[{I|L}P]T{M(Oxidation (M))|F}K;{[CT]|[{M(Oxidation (M))|F}G]}A[KP][{I|L}P]T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[{I|L}P][RD]{M(Oxidation (M))|F}K;[KT][RD][{I|L}P]GV[YG];[C(Carbamidomethyl (C))K][{I|L}V][{I|L}P]GV[YG];{[CT]|[{M(Oxidation (M))|F}G]}A[KP][{I|L}P]GV[YG];{[WT]|[RM]}{[NV]|[RG]}[{I|L}P]R[YG];{[WT]|[RM]}{[NV]|[RG]}[{I|L}P]G[YR] 4.3949;3.2969;3.2969;3.0219;2.4636;1.8626;0.80849;0.76857;0.71831;0.60521 -;-;-;-;-;-;-;-;-;- 410 1 2.979 97042.3 0.4699999988079071 578 3446 4023 HBL1_DMSO_200M_050219_2,4026 HBL1_DMSO_200M_050219_2,4026,IIPLVMEMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4029 18.945 50.0 1299600.0 25 0 117860.0 + 21473 LPHNTHRVV 9 74 358.2052393067086 1071.593888520326 3 358.2050048708916 MULTI CID FTMS 0 0 0 4028 1163090.375 1.0 0 0.0 1 Unmodified _LPHNTHRVV_ ENSG00000197858|ENST00000355091|GPAA1;ENST00000529638.1_1_8:145140125-145141025:+|nuORF;ENST00000534072.1_1_8:145139936-145140713:+|nuORF;nc|ENSG00000197858|O43292-2|GPAA1 39.94969957227396 0.0757326808254658 4 {I|L}PHNTH 6 3 66.952 0.0 0.0 6.2479 0.0 0.0 0.0 369.2248934381469 369.2248934381469 58.606902131726784 0.0 0.0 0.0 0 0.25 1.2218487496163564 0.805462187404089 0.4247425010840047 + {I|L}PHNTH 6.2479 + + 63 + 1 2.979 59273.1 1.0 579 3448 4028 HBL1_DMSO_200M_050219_2,4029 HBL1_DMSO_200M_050219_2,4029,LPHNTHRVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4030 18.95 303.0 176730.0 25 0 14297.0 + 34148 SLLYDSIVP 9 77 503.7747301182709 1005.5349073033418 2 503.7743408083916 MULTI CID FTMS 0 0 0 4028 117900.90625 0.4736349267922804 -22 0.2618961334228515 2 Unmodified _SLLYDSIVP_ REV__ENSG00000197386|ENST00000355072|HTT 30.22481116460888 0.1466181017706357 4 TGQTTD{I|L}TV 9 -1 55.557 0.0 0.0 5.5252 0.0 0.0 71.07422072578281 0.0 71.07422072578281 0.0 39.76052880266622 0.0 0.0 0 0.0 0.0 0.8909593382398109 0.3494850021680094 TGQTTD{I|L}TV 5.5252 - 330 1 2.979 44859.7 1.0 580 3448 4028 HBL1_DMSO_200M_050219_2,4030 HBL1_DMSO_200M_050219_2,4030,SLLYDSIVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4035 18.979 800.0 171400.0 25 0 23996.0 + 21149 LPASARKV 8 124 421.2666519528286 840.5187509724573 2 421.2662841677666 MULTI CID FTMS 0 0 0 4034 125612.8046875 0.6016314851450323 10 -0.0532970428466796 1 Unmodified _LPASARKV_ ENSG00000072571|ENST00000393915|HMMR;ENST00000517936.1_1_5:162887680-162896865:+|nuORF;ENST00000521108.5_1_5:162887680-162891880:+|nuORF;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330|HMMR 19.256988751693697 0.6264283240490721 4 {I|L}PAS 4 4 54.24 0.0 0.0 6.4532 0.0 0.0 0.0 469.28742395572505 469.28742395572505 40.74539712336197 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}PAS 6.4532 + + 45 + 1 2.979 108607.6 0.5699999928474426 581 3452 4034 HBL1_DMSO_200M_050219_2,4035 HBL1_DMSO_200M_050219_2,4035,LPASARKV False True LPASARKV 18.979034 421.266284167767 2644423.75 4034.0 chr5:163464802-163467701|38|15.39|0.68|4.5|+|0|HMMR,HMMR|1;;nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;ENST00000517936.1_1_5:162887680-162896865:+|nuORF;;ENSG00000072571|ENST00000393915|HMMR;;ENST00000521108.5_1_5:162887680-162891880:+|nuORF 3.0267576773961387 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4038 18.988 93.0 597760.0 25 0 92802.0 + -1 IQRLETMK 8 79 517.7861103411734 1033.5576677491467 2 517.7869750857353 MULTI CID FTMS 0 0 0 4037 529942.875 0.003033176563779 156 -1.8629474639892576 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 4 KTT[{I|L}P][WP]K 8 -1 42.713 0.0 0.0 4.1326 0.0 0.0 63.99737914212012 0.0 63.99737914212012 0.0 30.94720941673181 0.0 0.0 0 1.6861818737241734 0.0 0.8494850021680094 0.2742275032520141 KTT[{I|L}P][WP]K 4.1326 - 74 + 1 2.979 50946.9 1.0 582 3454 4037 HBL1_DMSO_200M_050219_2,4038 HBL1_DMSO_200M_050219_2,4038,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4048 19.028 291.0 307510.0 25 0 52978.0 + -1 KRRWNMMK 8 83 591.3041135727308 1180.5936742122617 2 591.3048583865166 MULTI CID FTMS 0 0 0 4047 302848.5 0.8350234588712376 -3 0.0121898651123046 1 2 Oxidation (M) _KRRWNM(Oxidation (M))M(Oxidation (M))K_ REV__ENST00000344293.5_1_10:7866412-8006047:+|nuORF 16.942295170755138 0.6606234159769251 4 QT{M(Oxidation (M))|F}T[{I|L}P][WP]K 9 -1 44.988 0.0 0.0 3.8106 0.0 0.0 63.99817786347087 0.0 63.99817786347087 0.0 27.23628654999466 0.0 0.0 0 1.1549471895720984 0.0 1.305462187404089 0.2302046884880938 QT{M(Oxidation (M))|F}T[{I|L}P][WP]K 3.8106 - 329 + 1 2.979 72490.3 1.0 583 3463 4047 HBL1_DMSO_200M_050219_2,4048 HBL1_DMSO_200M_050219_2,4048,KRRWNMMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4051 19.038 158.0 329140.0 25 0 36317.0 + 8328 ERLQLSMFSA 10 83 394.53851389446686 1180.5937122836006 3 394.5385619997978 MULTI CID FTMS 0 0 0 4050 383422.15625 0.9841757142397636 5 -0.0340595245361328 1 Unmodified _ERLQLSMFSA_ REV__ENSG00000158486|ENST00000698260|DNAH3;REV__nc|ENSG00000158486|Q8TD57-2|DNAH3;REV__nc|ENSG00000158486|Q8TD57-3|DNAH3;REV__nc|ENSG00000158486|Q8TD57|DNAH3 9.38312468134398 0.6832340498775793 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F}K 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 29.351 15.234 3.5491 2.4861 2.4861 45.066 0.0 0.0 0.0 0.0 16.960631464213456 0.0 0.0 0 0.8494850021680094 0.0 0.3054621874040891 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F}K 2.4861 - 121 + 1 2.979 51261.9 1.0 584 3465 4050 HBL1_DMSO_200M_050219_2,4051 HBL1_DMSO_200M_050219_2,4051,ERLQLSMFSA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4054 19.058 800.0 98360.0 25 0 11333.0 + -1 REAGIITTKM 10 101 568.3103508352077 1134.606148737215 2 568.3108398318291 MULTI CID FTMS 0 0 0 4053 87413.5859375 0.6978109235789033 1 -0.0163688659667968 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENST00000591437.5_1_17:75196686-75199708:+|nuORF 29.081581746732265 0.1611639662936252 4 TT[{I|L}P][WP]K 7 -1 36.699 0.0 0.0 3.2345 0.0 0.0 293.1436986413153 0.0 293.1436986413153 0.0 17.607179420755795 0.0 0.0 0 1.5356668758921828 0.0 0.9247425010840048 0.3054621874040891 TT[{I|L}P][WP]K 3.2345 - 258 + 1 2.979 65231.9 0.4900000095367431 585 3467 4053 HBL1_DMSO_200M_050219_2,4054 HBL1_DMSO_200M_050219_2,4054,EKKLQNTMK False False REAGIITTKM 19.058106 568.310839831829 773760.125 4053.0 ENST00000591437.5_1_17:75196686-75199708:+|nuORF 1.4112148483594258 2.0 False 10.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4058 19.082 800.0 183590.0 25 0 36763.0 + 38402 TRATPSAAFL 10 155 345.5271286564371 1033.5595565695114 3 345.5268432497978 MULTI CID FTMS 0 0 0 4057 61062.40234375 0.0024104035946265 172 -2.2325210571289062 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 15.248480904072842 0.5916873121453583 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 16.911 0.0 0.0 1.6362 0.0 0.0 0.0 601.3032824169642 601.3032824169642 3.994104727504944 0.0 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.6362 + + 200 1 2.979 123195.5 0.9900000095367432 586 3470 4057 HBL1_DMSO_200M_050219_2,4058 HBL1_DMSO_200M_050219_2,4058,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4059 19.085 113.0 458070.0 25 0 38187.0 + 42739 VVDPNDPQM 9 81 515.7288656856505 1029.4431784381009 2 515.7294189333916 MULTI CID FTMS 0 0 0 4057 528889.625 0.4454857776991627 -13 0.0702228546142578 2 Oxidation (M) _VVDPNDPQM(Oxidation (M))_ ENSG00000151883|ENST00000281631|PARP8 41.8396318013385 0.0653578398400075 4 DPQ{M(Oxidation (M))|F} 4 5 35.081 0.0 0.0 3.4078 0.0 0.0 524.2600252172009 0.0 524.2600252172009 0.0 5.900253588913955 0.0 0.0 0 0.5 0.0 0.0 0.805462187404089 + DPQ{M(Oxidation (M))|F} 3.4078 + + 218 + 1 2.979 45436.8 1.0 587 3470 4057 HBL1_DMSO_200M_050219_2,4059 HBL1_DMSO_200M_050219_2,4059,VVDPNDPQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4060 19.099 800.0 243760.0 25 0 14153.0 + 918 AFAHHGRSL 9 182 332.511033320833 994.5112705626992 3 332.5101196169853 MULTI CID FTMS 0 0 0 4057 84630.109375 0.3766830442497964 -9 0.0541439056396484 3 Unmodified _AFAHHGRSL_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;nc|ENSG00000137265|Q15306-2|IRF4 31.26834338654808 0.1333407332142048 4 A{M(Oxidation (M))|F}AHH[Q{I|L}]A 8 4 47.256 0.0 0.0 4.7516 0.0 0.0 0.0 116.05092035465076 116.05092035465076 19.618806617312643 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.3494850021680094 A{M(Oxidation (M))|F}AHH[Q{I|L}]A 4.7516 - 235 + 1 2.979 154639.0 0.3700000047683716 588 3470 4057 HBL1_DMSO_200M_050219_2,4060 HBL1_DMSO_200M_050219_2,4060,AFAHHGRSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4065 19.125 668.0 251250.0 25 0 20472.0 + 4294 DARHAIKKI 9 200 351.218509272341 1050.633698417223 3 351.2169677615166 MULTI CID FTMS 0 0 0 4064 52767.9453125 0.1376285335703086 -10 0.0828495025634765 1 Unmodified _DARHAIKKI_ ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12 24.95707706330732 0.2136420476055689 4 [RH]GEA{I|L}KK{I|L} 9 4 + 40.198 0.0 0.0 3.8261 3.8261 78.939 0.0 0.0 0.0 3.2568864632742844 22.82956856894565 3.2568864632742844 11.788619957573054 0 0.2396518287104437 0.0 0.0 0.0 [RH]GEA{I|L}KK{I|L};{I|L}[RK]{[YC]|[HE]}KK{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}SA[HV]K{I|L};[RH]GE{I|L}KAK{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[YC]|[HE]}{I|L}KK{I|L};{I|L}[RK]{[YC]|[HE]}K{I|L}K;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}SA[HV]K{I|L};[RH]GVVDKK{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}S[HV]AK{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{[YC]|[HE]}KK{I|L} 3.8261;2.7041;2.5624;2.5338;2.452;2.4405;2.3025;2.2357;2.0822;1.9341 -;-;-;-;-;-;-;-;-;- 913 1 2.979 132982.1 1.0 589 3474 4064 HBL1_DMSO_200M_050219_2,4065 HBL1_DMSO_200M_050219_2,4065,DARHAIKKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4068 19.142 607.0 152420.0 25 0 14420.0 + -1 IMINCNPNQAC 11 113 412.842453285144 1235.505530455632 3 412.8426086306572 MULTI CID FTMS 0 0 0 4067 143407.265625 0.0818871611119644 -23 0.1499614715576172 1 Oxidation (M) _IM(Oxidation (M))INCNPNQAC_ REV__ENSG00000186280|ENST00000335080|KDM4D 5.047519993296601 0.8513334072183365 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[H{I|L}]KDYP 8 -1 38.708 0.0 0.0 3.1329 0.0 0.0 0.0 218.9880134085993 218.9880134085993 23.22305411414966 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 1.555462187404089 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[H{I|L}]KDYP 3.1329 - 629 1 2.979 77304.9 1.0 590 3476 4067 HBL1_DMSO_200M_050219_2,4068 HBL1_DMSO_200M_050219_2,4068,IMINCNPNQAC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4071 19.159 582.0 130670.0 25 0 13638.0 + 34553 SPESLPSSQ 9 108 466.22204073857824 930.4295285439564 2 466.2223998904228 MULTI CID FTMS 0 0 0 4070 84818.9609375 0.2887141318099805 -8 0.0799732208251953 1 Unmodified _SPESLPSSQ_ REV__ENSG00000166272|ENST00000448841|WBP1L;REV__nc|ENSG00000166272|Q9NX94|WBP1L 39.957323273325 0.0756908302845263 4 QDPSQS 6 -1 31.247 0.0 0.0 3.3584 0.0 0.0 270.15034682441564 0.0 270.15034682441564 0.0 13.973161280529457 0.0 0.0 0 0.5242275032520141 0.0 0.75 0.0 QDPSQS 3.3584 - 170 1 2.979 62649.5 1.0 591 3478 4070 HBL1_DMSO_200M_050219_2,4071 HBL1_DMSO_200M_050219_2,4071,SPESLPSSQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4074 19.179 800.0 125820.0 25 0 30857.0 + 28314 PRRPPPPPP 9 105 505.79833978216 1009.58212663112 2 505.7993347048759 MULTI CID FTMS 0 0 0 4073 93256.3359375 0.2102704017660386 145 -1.824377059936524 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 85.35673624503755 0.0162188719545379 4 RPRPPPPPP 9 2 + 55.263 0.0 0.0 5.4738 5.4738 72.052 0.0 0.0 0.0 31.88547520912806 3.731063536923223 3.731063536923223 1.2371250542002343 0 2.223197507588033 0.0 0.0 0.0 RPRPPPPPP;PRRPPPPPP;RPRPPP[YK];PRRPPP[YK];RPR[YK]PPP;[RP]R[YK]PPP;PRR[YK]PPP;RPR[YK][YK];PRR[YK][YK];RPRP[YK]PP 5.4738;5.3513;4.3634;4.2409;4.1676;4.1473;4.045;3.064;2.9414;2.8523 -;+;-;-;-;-;-;-;-;- + 337 + 1 2.979 78837.6 0.4699999988079071 592 3480 4073 HBL1_DMSO_200M_050219_2,4074 HBL1_DMSO_200M_050219_2,4074,PRRPPPPPP True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4075 19.193 800.0 120040.0 25 0 4709.1 + -1 DMMNGQFHQL 10 113 618.7601952448414 1235.505837556483 2 618.7612792849541 MULTI CID FTMS 0 0 0 4073 114557.4296875 0.1549205314626421 -19 0.150726318359375 2 Oxidation (M) _DMM(Oxidation (M))NGQFHQL_ REV__ENSG00000183495|ENST00000389561|EP400;REV__nc|ENSG00000183495|Q96L91-3|EP400;REV__nc|ENSG00000183495|Q96L91-4|EP400;REV__nc|ENSG00000183495|Q96L91-5|EP400;REV__nc|ENSG00000183495|Q96L91|EP400;REV__nc|ENSG00000185684|Q6ZTU2-2|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-4|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-5|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-6|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2|EP400P1 22.736283301280096 0.4578556481593033 4 PYDKNH{I|L}Q 8 -1 66.537 0.0 0.0 5.3854 0.0 0.0 222.0121684354679 0.0 222.0121684354679 0.0 40.83591078869584 0.0 0.0 0 2.048455006504028 0.0 0.3494850021680094 1.885151878060192 PYDKNH{I|L}Q 5.3854 - 1244 + 1 2.979 76913.1 0.4600000083446502 593 3480 4073 HBL1_DMSO_200M_050219_2,4075 HBL1_DMSO_200M_050219_2,4075,DMMNGQFHQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4077 19.209 800.0 205260.0 25 0 24588.0 + -1 VQIAWLTMK 9 128 553.3051262420819 1104.5956995509637 2 553.3058959841728 MULTI CID FTMS 0 0 0 4076 178997.25 0.5877864553777232 13 -0.1138973236083984 1 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 32.78568957990786 0.1150597335874693 4 KTT{I|L}P[RD]T 8 -1 59.15 0.0 0.0 5.3549 0.0 0.0 63.998104895557226 125.07227502994375 189.070379925501 0.0 0.0 0.0 0.0 0 1.774227503252014 0.0 2.079689690656103 0.0 KTT{I|L}P[RD]T 5.3549 - 980 + 1 2.979 125844.8 0.6600000262260437 594 3481 4076 HBL1_DMSO_200M_050219_2,4077 HBL1_DMSO_200M_050219_2,4077,VQIAWLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4078 19.219 550.0 150560.0 25 0 48126.0 + -1 SRQFSSRSG 9 85 527.2572035547854 1052.4998541763707 2 527.2574951052666 MULTI CID FTMS 0 0 0 4076 99987.96875 0.5673326209496996 -8 0.0861034393310546 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SRQFSSRSG_ P04264;ENSG00000167768|ENST00000252244|KRT1 32.89776655970281 0.1144444835665315 4 {[RE]|[WV]}Q{M(Oxidation (M))|F}SSR[SG] 9 -1 + 39.613 0.0 0.0 3.7637 3.7637 77.537 0.0 0.0 0.0 8.990437130769145 21.19666231504993 8.990437130769145 9.208187539523756 0 1.9731975075880328 0.0 0.3252574989159953 0.3494850021680094 {[RE]|[WV]}Q{M(Oxidation (M))|F}SSR[SG];{[RE]|[WV]}Q{M(Oxidation (M))|F}SS[VG][SG];{[RE]|[WV]}QW[YK][SG];{[CT]|[{M(Oxidation (M))|F}G]}{[QV]|[N{I|L}]|[RA]|[KV]}ESSR[SG];{[RE]|[WV]}[AG]W[YK][SG] 3.7637;2.8888;1.989;1.583;1.1089 -;-;-;-;- 112 1 2.979 70319.8 1.0 595 3481 4076 HBL1_DMSO_200M_050219_2,4078 HBL1_DMSO_200M_050219_2,4078,SRQFSSRSG False False SRQFSSRSG 19.218864 527.257495105267 995706.3125 4076.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 5.995889186859131 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4081 19.239 800.0 137390.0 25 0 19149.0 + 42280 VSQNLEEK 8 125 473.7467500353157 945.4789471374312 2 473.7460510134697 MULTI CID FTMS 0 0 0 4080 102342.21875 0.6036219146970865 -9 0.1121883392333984 1 Unmodified _VSQNLEEK_ REV__ENSG00000046651|ENST00000340096|OFD1;REV__ENST00000490265.5_1_X:13771424-13787224:+|nuORF;REV__nc|ENSG00000046651|O75665-3|OFD1 36.12702656103203 0.299085846329477 4 [VS]QVDAAEK 9 -1 + 84.218 0.0 0.0 8.9075 8.9075 93.227 0.0 0.0 0.0 25.6424927368726 12.384381005764311 12.384381005764311 9.208187539523747 0 0.8494850021680094 2.0 0.8252574989159953 0.5866968715561641 [VS]QVDAAEK;[VS][AG]VDAAEK;[VS]QVDAAASV;[VS]QVDATQV;[VS]QVDAA[SG]{I|L};[VS]QVDATN{I|L};[VS]Q{[RE]|[WV]}AEK;[VS][AG]VDAAASV;[VS][AG]VDATQV;[VS]Q{[SA]|[TG]}[TP]EK 8.9075;7.9336;7.5976;7.1279;6.8219;6.7684;6.5575;6.2257;6.154;5.9791 -;-;-;-;-;-;-;-;-;- 543 + 1 2.979 86219.8 0.4799999892711639 596 3483 4080 HBL1_DMSO_200M_050219_2,4081 HBL1_DMSO_200M_050219_2,4081,VSQNLEEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4082 19.253 800.0 47873.0 25 0 3064.8 -1 QACRCEDFGWW 11 70 757.7977810408843 1513.5810091485685 2 758.3001586794853 MULTI CID FTMS 0 0 0 4080 89086.921875 1.0 0 0.0 2 2 Carbamidomethyl (C) _QAC(Carbamidomethyl (C))RC(Carbamidomethyl (C))EDFGWW_ ENST00000474802.1_1_2:27355436-27356101:-|nuORF 2.9952420565917617 0.861016188266951 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[HN]GSGGGNGEEW 15 -1 + 71.437 0.0 0.0 4.7197 4.7197 73.623 0.0 0.0 0.0 47.75498964026646 10.0 10.0 3.679767852945943 0 0.0 0.0 1.079689690656103 0.3807196863200844 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[HN]GSGGGNGEEW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[HN]GSNGNGEEW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[HN]GSGGGNP{[MS]|[{M(Oxidation (M))|F}A]}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[HN]GSGGGN[WE]W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[HN]GSGNNGEEW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[HN]GSNGNP{[MS]|[{M(Oxidation (M))|F}A]}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[HN]GSNGN[WE]W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[HN]GSGGGNG[HS][YG];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[HN]GSGNNP{[MS]|[{M(Oxidation (M))|F}A]}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[HN]GSGNN[WE]W 4.7197;4.4766;4.322;4.2777;4.2777;4.0788;4.0361;4.0067;3.8799;3.8372 -;-;-;-;-;-;-;-;-;- 1754 + 1 2.979 33423.2 0.3799999952316284 597 3483 4080 HBL1_DMSO_200M_050219_2,4082 HBL1_DMSO_200M_050219_2,4082,QACRCEDFGWW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4092 19.303 800.0 156880.0 25 0 13539.0 + -1 HYLLLMTMK 9 142 394.53851389446686 1180.5937122836006 3 394.5387451052666 MULTI CID FTMS 0 0 0 4091 133153.3125 0.3417806047380131 32 -0.3045272827148437 1 2 Oxidation (M) _HYLLLM(Oxidation (M))TM(Oxidation (M))K_ REV__ENSG00000137497|ENST00000393695|NUMA1;REV__ENST00000534971.1_1_11:71733276-71735881:-|nuORF;REV__ENST00000534987.5_1_11:71728600-71747007:-|nuORF;REV__nc|ENSG00000137497|Q14980-2|NUMA1;REV__nc|ENSG00000137497|Q14980-3|NUMA1;REV__nc|ENSG00000137497|Q14980-4|NUMA1;REV__nc|ENSG00000137497|Q14980-5|NUMA1 18.373094154950223 0.3393451798331396 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F}K 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 35.543 14.425 3.3606 3.0106 3.0106 45.943 0.0 0.0 0.0 0.0 14.686979295102676 0.0 0.0 0 0.7887254899964358 0.0 1.024227503252014 0.25 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F}K 3.0106 - 541 + 1 3.011 110027.7 0.5899999737739563 598 3492 4091 HBL1_DMSO_200M_050219_2,4092 HBL1_DMSO_200M_050219_2,4092,HYLLLMTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4096 19.327 800.0 106840.0 25 0 15269.0 + -1 KRRWNMMK 8 86 591.3041135727308 1180.5936742122617 2 591.3046142458916 MULTI CID FTMS 0 0 0 4095 104961.2421875 0.2894024553492189 29 -0.2789020538330078 1 2 Oxidation (M) _KRRWNM(Oxidation (M))M(Oxidation (M))K_ REV__ENST00000344293.5_1_10:7866412-8006047:+|nuORF 12.531546534597751 0.7257836412119636 4 KT{M(Oxidation (M))|F}T[{I|L}P][WP]K 9 -1 36.761 0.0 0.0 3.1138 0.0 0.0 63.99751987506449 0.0 63.99751987506449 0.0 29.594465368295893 0.0 0.0 0 0.5 0.0 0.805462187404089 0.2614393726401688 KT{M(Oxidation (M))|F}T[{I|L}P][WP]K 3.1138 - 97 + 1 3.011 67332.8 0.5099999904632568 599 3495 4095 HBL1_DMSO_200M_050219_2,4096 HBL1_DMSO_200M_050219_2,4096,KRRWNMMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4099 19.336 65.0 605360.0 25 0 47436.0 + 42740 VVDPNDPQM 9 66 515.7288656856505 1029.4431784381009 2 515.7294799685478 MULTI CID FTMS 0 0 0 4098 802491.6875 0.6759418536581258 14 -0.1095046997070312 1 Oxidation (M) _VVDPNDPQM(Oxidation (M))_ ENSG00000151883|ENST00000281631|PARP8 49.55428908609986 0.0413471690215031 4 VVD[NP]DPQ{M(Oxidation (M))|F} 9 0 + 72.47 0.0 0.0 7.0397 7.0397 92.774 0.0 0.0 0.0 48.09894379144197 14.973024840566469 14.973024840566469 17.26280941356464 0 1.7302046884880935 2.0 0.0 0.805462187404089 + + VVD[NP]DPQ{M(Oxidation (M))|F};VVD[NP]DP[AG]{M(Oxidation (M))|F};VVD{[DS]|[MA]|[CV]|TT}[WY]{M(Oxidation (M))|F};VV[WM][WY]{M(Oxidation (M))|F};[NP]DDVVPQ{M(Oxidation (M))|F};[DP]NDVVPQ{M(Oxidation (M))|F};VVD[NP]{[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[NP]DD[QP]VV{M(Oxidation (M))|F};[DP]ND[QP]VV{M(Oxidation (M))|F};[NP]D[QP]DVV{M(Oxidation (M))|F} 7.0397;5.3628;4.1888;3.3729;2.9719;2.8506;2.5934;1.9813;1.8599;0.85558 +;-;-;-;-;-;-;-;-;- + 180 + 1 3.011 34713.8 1.0 600 3497 4098 HBL1_DMSO_200M_050219_2,4099 HBL1_DMSO_200M_050219_2,4099,VVDPNDPQM True False VVDPNDPQM 19.335977 515.729479968548 20946513.0 4098.0 ENSG00000151883|ENST00000281631|PARP8 9.566812992095947 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4100 19.349 733.0 93280.0 25 0 10112.0 + 26700 NYNTGRSV 8 100 455.7221694676469 909.4297860020936 2 455.7221862673759 MULTI CID FTMS 0 0 0 4098 83870.5234375 0.3817589629598652 -14 0.1082172393798828 2 Unmodified _NYNTGRSV_ ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5;nc|ENSG00000084693|Q8NDL9-3|AGBL5 32.30548876998284 0.3644845974844379 4 [YN]NT 4 4 46.995 0.0 0.0 5.1675 0.0 0.0 0.0 414.21027551822505 414.21027551822505 33.499934467764874 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.4247425010840047 + [YN]NT 5.1675 + + 100 + 1 3.011 57272.9 1.0 601 3497 4098 HBL1_DMSO_200M_050219_2,4100 HBL1_DMSO_200M_050219_2,4100,NYNTGRSV False True NYNTGRSV 19.348677 455.722186267376 949087.4375 4098.0 nc|ENSG00000084693|Q8NDL9-3|AGBL5;;ENSG00000084693|ENST00000360131|AGBL5;;nc|ENSG00000084693|Q8NDL9-2|AGBL5 4.175782044728597 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4102 19.365 800.0 226530.0 25 0 20072.0 + 919 AFAHHGRSL 9 178 332.511033320833 994.5112705626992 3 332.5103027224541 MULTI CID FTMS 0 0 0 4101 78752.4765625 0.3505220876216461 19 -0.1836299896240234 1 Unmodified _AFAHHGRSL_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;nc|ENSG00000137265|Q15306-2|IRF4 15.248480904072842 0.4239247793462406 4 A{M(Oxidation (M))|F}AHHVT{[NV]|[RG]} 9 4 + 50.598 0.0 0.0 5.0877 5.0877 84.207 0.0 0.0 0.0 34.889876719763755 3.536359699357398 3.536359699357398 13.017536195789036 0 0.2059771852360797 0.0 0.2742275032520141 0.1595680409956017 A{M(Oxidation (M))|F}AHHVT{[NV]|[RG]};A{M(Oxidation (M))|F}AHHVWK;A{M(Oxidation (M))|F}AHH[RK]E;A{M(Oxidation (M))|F}AH{I|L}[HS]{[NV]|[RG]} 5.0877;3.7788;3.6031;3.2293 -;-;-;- 227 + 1 3.011 145975.2 0.4399999976158142 602 3498 4101 HBL1_DMSO_200M_050219_2,4102 HBL1_DMSO_200M_050219_2,4102,AFAHHGRSL False True AFAHHGRSL 19.365046 332.510302722454 2615678.75 4101.0 nc|ENSG00000137265|Q15306-2|IRF4;;ENSG00000137265|ENST00000380956|IRF4;;chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4 5.942579905192058 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4104 19.371 151.0 413010.0 25 0 48001.0 + + 31515 DARHAIKKI 9 92 351.218509272341 1050.633698417223 3 351.2185546755791 MULTI CID FTMS 0 0 0 4103 205231.34375 0.5352811961068609 15 -0.1184883117675781 1 Unmodified _RQHELKKL_ ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12 24.99096001346401 0.5185035129578945 4 {I|L}KRSA{I|L} 6 -1 39.346 0.0 0.0 3.745 0.0 0.0 0.0 379.1848380272641 379.1848380272641 14.643827634361736 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 {I|L}KRSA{I|L} 3.745 - 182 + 1 3.011 54827.6 1.0 603 3499 4103 HBL1_DMSO_200M_050219_2,4104 HBL1_DMSO_200M_050219_2,4104,RQHELKKL False False DARHAIKKI 19.370604 351.218554675579 3922618.25 4103.0 ENSG00000184634|ENST00000374080|MED12;;nc|ENSG00000184634|Q93074-2|MED12;;nc|ENSG00000184634|Q93074-3|MED12 2.043867056568464 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4108 19.394 727.0 158880.0 25 0 43804.0 + 18105 KTLDQAKAV 9 121 487.2882209132479 972.561888893296 2 487.2887756228447 MULTI CID FTMS 0 0 0 4107 84199.609375 0.5478674571036132 -8 0.0719871520996093 1 Unmodified _KTLDQAKAV_ ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10 67.08073823543168 0.0222274355215578 4 G{I|L}TDQAKAV 9 3 61.373 0.0 0.0 6.3105 0.0 0.0 71.07415206123203 0.0 71.07415206123203 0.0 38.18549420653092 0.0 0.0 0 1.9489700043360187 0.0 0.805462187404089 0.6307196863200843 G{I|L}TDQAKAV 6.3105 - 623 1 3.011 90969.1 1.0 604 3502 4107 HBL1_DMSO_200M_050219_2,4108 HBL1_DMSO_200M_050219_2,4108,KTLDQAKAV True True KTLDQAKAV 19.39385 487.288775622845 635418.5625 4107.0 ENSG00000135372|ENST00000257829|NAT10;;nc|ENSG00000135372|Q9H0A0-2|NAT10 5.098799864451091 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4110 19.399 29.0 1186100.0 25 0 103620.0 -1 AYRMFTNNTC 10 78 412.842453285144 1235.505530455632 3 412.8427001833916 MULTI CID FTMS 0 0 0 4109 1614686.0 0.9220038611780303 4 -0.017913818359375 1 Oxidation (M) _AYRM(Oxidation (M))FTNNTC_ ENSG00000138411|ENST00000644978|HECW2 3.5870582119611467 0.710044248540513 4 C 1 -1 15.485 0.0 0.0 1.2533 0.0 0.0 1114.4855165779936 0.0 1114.4855165779936 0.0 1.750743698387252 0.0 0.0 0 0.0 0.0 0.0 0.0 C 1.2533 + + 55 + 1 3.011 35799.7 1.0 605 3503 4109 HBL1_DMSO_200M_050219_2,4110 HBL1_DMSO_200M_050219_2,4110,AYRMFTNNTC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4114 19.412 128.0 494220.0 25 0 70316.0 + -1 IQRLETMK 8 72 517.7861103411734 1033.5576677491467 2 517.7868530154228 MULTI CID FTMS 0 0 0 4113 533444.375 0.0030532177196075 208 -3.046426773071289 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 4 KTT[{I|L}P][WP]K 8 -1 44.742 0.0 0.0 4.3289 0.0 0.0 63.99758836658436 0.0 63.99758836658436 0.0 26.84955642535897 0.0 0.0 0 0.9247425010840048 0.0 1.3494850021680094 0.2614393726401688 KTT[{I|L}P][WP]K 4.3289 - 192 + 1 3.011 53237.2 1.0 606 3506 4113 HBL1_DMSO_200M_050219_2,4114 HBL1_DMSO_200M_050219_2,4114,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4117 19.432 771.0 114210.0 25 0 24372.0 + 28315 PRRPPPPPP 9 99 505.79833978216 1009.58212663112 2 505.7982971072197 MULTI CID FTMS 0 0 0 4116 61794.48046875 0.1393315543063573 173 -2.386341094970703 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 34.10243960390752 0.1078313939113124 4 RPR{[HG]|PP}PPPP 9 2 + 33.284 0.0 0.0 3.2969 3.2969 65.494 0.0 0.0 0.0 9.120316676692042 6.928119562831586 6.928119562831586 1.8309843995574224 0 1.8882104921644447 0.0 0.0 0.0 RPR{[HG]|PP}PPPP;PRR{[HG]|PP}PPPP;RPR[YK]PPP;PRR[YK]PPP;RPR{[HG]|PP}P[YK];PRR{[HG]|PP}P[YK];RPR[YK][YK];PRR[YK][YK] 3.2969;3.1155;2.9534;2.772;1.9332;1.7518;1.5965;1.4151 -;+;-;-;-;-;-;- + 94 + 1 3.011 72129.5 1.0 607 3508 4116 HBL1_DMSO_200M_050219_2,4117 HBL1_DMSO_200M_050219_2,4117,PRRPPPPPP True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4119 19.437 112.0 349310.0 25 0 20611.0 + -1 DMMNGQFHQL 10 76 618.7601952448414 1235.505837556483 2 618.7606689333916 MULTI CID FTMS 0 0 0 4118 556257.1875 0.7522485390296576 10 -0.1360359191894531 1 Oxidation (M) _DMM(Oxidation (M))NGQFHQL_ REV__ENSG00000183495|ENST00000389561|EP400;REV__nc|ENSG00000183495|Q96L91-3|EP400;REV__nc|ENSG00000183495|Q96L91-4|EP400;REV__nc|ENSG00000183495|Q96L91-5|EP400;REV__nc|ENSG00000183495|Q96L91|EP400;REV__nc|ENSG00000185684|Q6ZTU2-2|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-4|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-5|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2-6|EP400P1;REV__nc|ENSG00000185684|Q6ZTU2|EP400P1 12.240655878213236 0.6421556946785427 4 PYDKNHQ{I|L} 8 -1 55.156 0.0 0.0 4.4643 0.0 0.0 222.01308843460885 0.0 222.01308843460885 0.0 36.96858230198188 0.0 0.0 0 2.055462187404089 0.0 0.0 1.4916440611282626 PYDKNHQ{I|L} 4.4643 - 221 + 1 3.011 33422.8 1.0 608 3509 4118 HBL1_DMSO_200M_050219_2,4119 HBL1_DMSO_200M_050219_2,4119,DMMNGQFHQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4122 19.449 333.0 347860.0 25 0 58304.0 + 42431 VTEWYRGANP 10 114 398.1950887918736 1191.5634369758209 3 398.1950561404228 MULTI CID FTMS 0 0 0 4121 261527.390625 0.3116998675935737 -7 0.042062759399414 1 Unmodified _VTEWYRGANP_ REV__ENSG00000154930|ENST00000323482|ACSS1;REV__nc|ENSG00000154930|Q9NUB1-2|ACSS1;REV__nc|ENSG00000154930|Q9NUB1-3|ACSS1;REV__nc|ENSG00000154930|Q9NUB1-4|ACSS1 27.628801355627647 0.3479284626772844 4 VTEREQR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 9 -1 + 83.106 0.0 0.0 6.9745 6.9745 90.0 0.0 0.0 0.0 72.64806896928819 5.642492736872612 5.642492736872612 9.208187539523763 0 0.4545391030138068 1.6989700043360187 0.4247425010840047 0.9698565171985376 VTEREQR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};VTERE[AG]R{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 6.9745;6.2017 -;- 386 + 1 3.011 99714.4 1.0 609 3511 4121 HBL1_DMSO_200M_050219_2,4122 HBL1_DMSO_200M_050219_2,4122,VTEWYRGANP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4124 19.466 800.0 175100.0 25 0 22523.0 + -1 VQIAWLTMK 9 115 553.3051262420819 1104.5956995509637 2 553.3055297732353 MULTI CID FTMS 0 0 0 4123 197027.203125 0.6469927406026094 44 -0.6321144104003906 1 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 32.78568957990786 0.1150597335874693 4 [KT][RD]P{I|L}T{M(Oxidation (M))|F}K 9 -1 + 69.033 0.0 0.0 6.2496 6.2496 88.243 0.0 0.0 0.0 0.7378621416091846 45.53482458040534 0.7378621416091846 11.192030164828708 0 1.805462187404089 0.0 1.5114393726401687 0.0 [KT][RD]P{I|L}T{M(Oxidation (M))|F}K;{[CT]|[{M(Oxidation (M))|F}G]}A[KP]P{I|L}T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP]P{I|L}T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP]P{I|L}TT{[CA]|SS};[KT][RD]P{I|L}GV[YG];[KT]T[{I|L}P][RD]{M(Oxidation (M))|F}K;{[CT]|[{M(Oxidation (M))|F}G]}A[KP]P{I|L}GV[YG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP]P{I|L}GV[YG];[KT]T[PA]A{I|L}T[R{M(Oxidation (M))|F}];[KT]TAAP{I|L}T[R{M(Oxidation (M))|F}] 6.2496;5.2364;4.5007;3.7352;3.4898;2.7052;2.4805;1.7409;0.71842;0.4459 -;-;-;-;-;-;-;-;-;- 797 1 3.011 109714.6 0.6700000166893005 610 3512 4123 HBL1_DMSO_200M_050219_2,4124 HBL1_DMSO_200M_050219_2,4124,VQIAWLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4125 19.479 800.0 116390.0 25 0 37415.0 -1 TVEVWMGLNQ 10 79 596.7887454276179 1191.5629379220356 2 596.7892333865166 MULTI CID FTMS 0 0 0 4123 93065.5390625 0.3847509807083011 -6 0.0426807403564453 2 Oxidation (M) _TVEVWM(Oxidation (M))GLNQ_ ENSG00000153246|ENST00000283243|PLA2R1;nc|ENSG00000153246|Q13018-2|PLA2R1 13.90604991867851 0.6142120002215601 4 {[TV]|[{I|L}S]}EREQCK{[CP]|[EA]} 10 -1 + 40.283 0.0 0.0 3.3807 3.3807 67.856 0.0 0.0 0.0 19.916440611282624 33.293578219013824 19.916440611282624 3.0102999566398125 0 1.3182503180159344 1.6989700043360187 0.4247425010840047 0.0 {[TV]|[{I|L}S]}EREQCK{[CP]|[EA]};{[TV]|[{I|L}S]}EREQCE[KA];{[TV]|[{I|L}S]}ERE[AG]CK{[CP]|[EA]};{[TV]|[{I|L}S]}ERE[AG]CE[KA] 3.3807;3.1281;2.6116;2.359 -;-;-;- 81 1 3.011 72842.2 0.4199999868869781 611 3512 4123 HBL1_DMSO_200M_050219_2,4125 HBL1_DMSO_200M_050219_2,4125,TVEVWMGLNQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4128 19.5 800.0 93109.0 25 0 4559.8 8054 ENQELPDEGT 10 104 566.2442212504752 1130.4738895677503 2 566.2446777224541 MULTI CID FTMS 0 0 0 4127 106349.1171875 0.857900265871378 -3 0.0428371429443359 1 Unmodified _ENQELPDEGT_ ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA 12.240655878213236 0.6421556946785427 4 {[SA]|[TG]}EQAEDHY 9 9 44.319 0.0 0.0 3.9204 0.0 0.0 0.0 97.041330205725 97.041330205725 21.36046240493748 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 {[SA]|[TG]}EQAEDHY 3.9204 - 431 + 1 3.011 61229.6 0.449999988079071 612 3514 4127 HBL1_DMSO_200M_050219_2,4128 HBL1_DMSO_200M_050219_2,4128,ENQELPDEGT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4129 19.514 800.0 57995.0 25 0 6176.6 -1 0 73 896.3674133963333 1790.7202738594665 2 896.3697997927666 MULTI CID FTMS 0 0 0 4127 80456.765625 0.7791312134377938 -3 0.0428371429443359 2 4 GG{[DS]|[MA]|[CV]|TT}{[NV]|[RG]}GSGGGYGGG[C(Carbamidomethyl (C))H] 17 -1 68.82 0.0 0.0 3.8431 0.0 0.0 297.1073475568375 0.0 297.1073475568375 0.0 57.85090774247281 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 GG{[DS]|[MA]|[CV]|TT}{[NV]|[RG]}GSGGGYGGG[C(Carbamidomethyl (C))H] 3.8431 - 1110 1 3.011 36627.1 0.3400000035762787 613 3514 4127 HBL1_DMSO_200M_050219_2,4129 HBL1_DMSO_200M_050219_2,4129, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4132 19.532 681.0 138510.0 25 0 18774.0 -1 EKKLQNTMK 9 87 568.3102328550845 1134.6059127769688 2 568.3103515505791 MULTI CID FTMS 0 0 0 4131 91149.9296875 0.4330305966905824 -20 0.1906642913818359 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 20.41453444215458 0.284085796332423 4 T{M(Oxidation (M))|F}K 3 -1 39.737 0.0 0.0 3.5023 0.0 0.0 740.4183257234124 0.0 740.4183257234124 0.0 16.359921914233908 0.0 0.0 0 1.274227503252014 0.0 0.3807196863200844 0.0 T{M(Oxidation (M))|F}K 3.5023 + + 147 1 3.011 77883.5 1.0 614 3516 4131 HBL1_DMSO_200M_050219_2,4132 HBL1_DMSO_200M_050219_2,4132,EKKLQNTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4135 19.554 800.0 61839.0 25 0 3980.5 -1 LQWSWPVSSQ 10 83 630.3090309061633 1258.6035088791266 2 630.3087036013603 MULTI CID FTMS 0 0 0 4134 69312.0703125 0.5127826549844898 -11 0.1244564056396484 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LQWSWPVSSQ_ ENST00000533070.5_1_17:8077537-8079140:-|nuORF;nc|ENSG00000179029|Q6UX40-2|TMEM107 31.26834338654808 0.266153677697784 4 DPSQSTN 7 -1 56.247 0.0 0.0 4.469 0.0 0.0 511.2989369123063 0.0 511.2989369123063 0.0 35.61197907529518 0.0 0.0 0 1.3182503180159344 0.0 1.610924374808178 0.0 DPSQSTN 4.469 - 412 1 3.011 41762.1 0.4000000059604645 615 3518 4134 HBL1_DMSO_200M_050219_2,4135 HBL1_DMSO_200M_050219_2,4135,LQWSWPVSSQ False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 4136 19.568 800.0 124170.0 25 0 17711.0 + 18159 KTQRSPAL 8 101 450.7665816332408 899.5186103332817 2 450.7665283083916 MULTI CID FTMS 0 0 0 4134 100048.3125 0.4127977453559954 -12 0.1296291351318359 2 Unmodified _KTQRSPAL_ REV__ENST00000569105.5_1_11:69468929-69488043:-|nuORF 20.453626601364224 0.6087503291685402 4 KT 2 -1 32.717 0.0 0.0 3.6371 0.0 0.0 0.0 667.3534003664017 667.3534003664017 18.737125054200234 0.0 0.0 0.0 0 0.75 0.0 0.4247425010840047 0.0 KT 3.6371 + + 48 + 1 3.011 82321.4 0.449999988079071 616 3518 4134 HBL1_DMSO_200M_050219_2,4136 HBL1_DMSO_200M_050219_2,4136,KTQRSPAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4139 19.578 160.0 522010.0 25 0 27401.0 + 38403 TRATPSAAFL 10 97 345.52701171142166 1033.559205734465 3 345.5268737673759 MULTI CID FTMS 0 0 0 4138 318412.28125 0.5337127865607286 -3 0.0394973754882812 1 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 20.41453444215458 0.5050059513928961 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 27.07 16.995 3.9593 2.6191 2.6191 45.269 0.0 0.0 0.0 0.0 13.798793729568857 0.0 0.0 0 0.5 0.0 0.7614393726401688 0.2059771852360797 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}K 2.6191 - 173 + 1 3.011 78887.3 1.0 617 3520 4138 HBL1_DMSO_200M_050219_2,4139 HBL1_DMSO_200M_050219_2,4139,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4144 19.606 786.0 160090.0 25 0 13498.0 + 36053 SVQHVDAAEK 10 152 361.85220902671705 0 361.8523132205009 PEAK CID FTMS 0 0 0 4143 84201.59375 0.8129320854470669 2 -0.0200271606445312 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2099104859468384 4 VD 2 8 9.464 0.0 0.0 1.3114 0.0 0.0 90.37339017896213 414.19941692533 504.57280710429205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + VD 1.3114 + + 60 + 1 3.011 107002.7 1.0 618 3524 4143 HBL1_DMSO_200M_050219_2,4144 HBL1_DMSO_200M_050219_2,4144,SVQHVDAAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4147 19.626 800.0 138860.0 25 0 15090.0 + 31940 RVDKNAPTV 9 118 500.2832717365496 998.5519905398992 2 500.2832519412041 MULTI CID FTMS 0 0 0 4146 131550.25 0.3097728300103485 -6 0.0378952026367187 1 Unmodified _RVDKNAPTV_ ENSG00000102879|ENST00000219150|CORO1A;ENST00000568982.5_1_16:30195026-30198313:+|nuORF;ENST00000569469.1_1_16:30195026-30198371:+|nuORF 45.739877483867886 0.0497104363764649 4 V{M(Oxidation (M))|F}PR[PS]VTP 9 7 + 70.09 0.0 0.0 7.0192 7.0192 80.663 0.0 0.0 0.0 19.13912869236917 2.6609538734827964 2.6609538734827964 2.6609538734827964 0 0.6505149978319906 1.6989700043360187 1.274227503252014 0.3252574989159953 V{M(Oxidation (M))|F}PR[PS]VTP;V{M(Oxidation (M))|F}PR[PS]PTV;V{[WT]|[RM]}{I|L}[PS]PTV;V{[WT]|[RM]}{I|L}[PS]VTP;[TP][RK][NS]PTV;[TP]V[KG][RN]EV;[TP]V[KG]{[{M(Oxidation (M))|F}H]|[RQ]}[{I|L}T];{[TV]|[{I|L}S]}P[KG][RN]EV 7.0192;6.7527;5.516;4.081;3.9623;3.0362;1.0111;0.43995 -;-;-;-;-;-;-;- 526 + 1 3.011 87007.5 0.5099999904632568 619 3526 4146 HBL1_DMSO_200M_050219_2,4147 HBL1_DMSO_200M_050219_2,4147,RVDKNAPTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4150 19.64 438.0 145350.0 25 0 17018.0 + 35022 SQQASPQTV 9 106 473.2355218260361 944.4564907188724 2 473.2358276247978 MULTI CID FTMS 0 0 0 4149 100394.375 0.4339464029685823 -3 0.0243148803710937 1 Unmodified _SQQASPQTV_ ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400 34.93206674587334 0.1032771302489716 4 TV 2 7 21.867 0.0 0.0 2.3153 0.0 0.0 726.3297339823473 0.0 726.3297339823473 0.0 -3.832505468665144 -3.832505468665144 0.0 0 0.5 0.0 0.2887254899964357 0.0 + TV 2.3153 + + 275 + 1 3.025 53394.9 1.0 620 3528 4149 HBL1_DMSO_200M_050219_2,4150 HBL1_DMSO_200M_050219_2,4150,SQQASPQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4151 19.654 800.0 61958.0 25 0 18004.0 -1 0 28 1125.112508828004 3372.315697084212 3 1125.448168933392 MULTI CID FTMS 0 0 0 4149 86770.46875 0.0561090799044883 -8 0.058328628540039 2 4 E 1 -1 4.6041 0.0 0.0 0.13653 0.0 0.0 2716.0872941313173 524.1615694635374 3240.248863594855 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.13653 - 1 + 1 3.025 51371.2 0.3300000131130218 621 3528 4149 HBL1_DMSO_200M_050219_2,4151 HBL1_DMSO_200M_050219_2,4151, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4153 19.669 712.0 123660.0 25 0 14722.0 -1 HQDICFSACGV 11 118 412.842453285144 1235.505530455632 3 412.8427307009697 MULTI CID FTMS 0 0 0 4152 60855.859375 0.0347493799531656 30 -0.4391670227050781 1 Carbamidomethyl (C) _HQDIC(Carbamidomethyl (C))FSACGV_ ENSG00000118690|ENST00000392644|ARMC2;nc|ENSG00000118690|Q8NEN0-2|ARMC2 3.84590784869206 0.857002691623471 4 {[CP]|[EA]}[YK]DE[NP]PAC 11 -1 + 22.407 0.0 0.0 1.8136 1.8136 71.661 0.0 0.0 0.0 3.23886584193016 6.922813549233776 3.23886584193016 8.239087409443187 0 0.3182503180159344 0.0 0.0 0.3494850021680094 {[CP]|[EA]}[YK]DE[NP]PAC;{[QV]|[N{I|L}]|[RA]|[KV]}[YT]DE[NP]PAC 1.8136;1.1468 -;- 107 1 3.025 72353.4 1.0 622 3529 4152 HBL1_DMSO_200M_050219_2,4153 HBL1_DMSO_200M_050219_2,4153,HQDICFSACGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4154 19.681 678.0 136000.0 25 0 7580.6 19895 LHREEMVYEL 10 116 440.2189709584329 1317.6350834754987 3 440.2194396853447 MULTI CID FTMS 0 0 0 4152 80141.34375 0.4573379478666165 -2 0.0282535552978515 2 Unmodified _LHREEMVYEL_ CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 10.898955630103616 0.6646681216928481 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQMNT{M(Oxidation (M))|F}QR 10 9 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H + + 59.021 1.4267 0.36191 4.4793 4.4793 50.453 0.0 0.0 0.0 0.0 38.57586369482071 0.0 0.0 0 1.305462187404089 0.0 0.3494850021680094 1.579689690656103 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQMNT{M(Oxidation (M))|F}QR 4.4793 - 522 + 1 3.025 78521.0 1.0 623 3529 4152 HBL1_DMSO_200M_050219_2,4154 HBL1_DMSO_200M_050219_2,4154,LHREEMVYEL False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 4156 19.686 64.0 815550.0 25 0 120700.0 + -1 IQRLETMK 8 61 517.7862120437948 1033.5578711543894 2 517.7869750857353 MULTI CID FTMS 0 0 0 4155 835875.3125 0.2035255623993253 6 -0.1881961822509765 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 4 T{M(Oxidation (M))|F}K 3 -1 43.94 0.0 0.0 4.2514 0.0 0.0 639.3702492862201 0.0 639.3702492862201 0.0 29.837425177946454 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 4.2514 + + 87 1 3.025 49254.6 1.0 624 3530 4155 HBL1_DMSO_200M_050219_2,4156 HBL1_DMSO_200M_050219_2,4156,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4157 19.69 194.0 480580.0 25 0 48989.0 + 44192 YLFHQLGR 8 105 345.1898524230684 1032.5477278694052 3 345.1898071169853 MULTI CID FTMS 0 0 0 4155 219651.984375 0.2740407277109797 -10 0.1091747283935546 2 Unmodified _YLFHQLGR_ REV__ENST00000397397.6_1_11:866620-867061:+|nuORF 13.90604991867851 0.7054780292895731 4 Y{I|L}NVNT 6 -1 36.089 0.0 0.0 3.4951 0.0 0.0 0.0 325.1628817193969 325.1628817193969 24.17735320183944 0.0 0.0 0.0 0 0.3182503180159344 0.0 0.3252574989159953 0.4247425010840047 Y{I|L}NVNT 3.4951 - 288 + 1 3.025 84007.7 1.0 625 3530 4155 HBL1_DMSO_200M_050219_2,4157 HBL1_DMSO_200M_050219_2,4157,YLFHQLGR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4158 19.697 404.0 206320.0 25 0 15931.0 + 35484 STMSTNGIPR 10 99 532.262583587631 1062.5106142420618 2 532.2629882693291 MULTI CID FTMS 0 0 0 4155 108984.4375 0.8535680132086974 -2 0.0508460998535156 3 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 55.50274090549119 0.048383292844968 4 {[MG]|[TS]}MSTNG{I|L}RP 10 2 + 64.703 0.0 0.0 6.0896 6.0896 75.623 0.0 0.0 0.0 7.269987279362624 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.5 0.0 0.3807196863200844 0.7302046884880937 {[MG]|[TS]}MSTNG{I|L}RP;{[MG]|[TS]}MSTNG{I|L}PR;{[MG]|[TS]}MSTGGG{I|L}RP;{[MG]|[TS]}MSTGGG{I|L}PR;{[MG]|[TS]}MST[KS][QP]P;{[QS]|[NT]}{I|L}{I|L}NTSC[TP];[VG][PS][KS]TSC[TP];{[QS]|[NT]}{I|L}{I|L}GGTSC[TP];{[MG]|[TS]}[C(Carbamidomethyl (C))C]AR{I|L}RP;{[MG]|[TS]}[C(Carbamidomethyl (C))C]AR{I|L}PR 6.0896;5.9239;5.2271;5.0614;2.843;2.6557;1.8014;1.7932;1.5215;1.3558 -;+;-;-;-;-;-;-;-;- + 317 + 1 3.025 68066.9 1.0 626 3530 4155 HBL1_DMSO_200M_050219_2,4158 HBL1_DMSO_200M_050219_2,4158,STMSTNGIPR True True STMSTNGIPR 19.6971 532.262988269329 40937736.0 4155.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 8.46610720952352 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4160 19.702 100.0 647130.0 25 0 118370.0 + 42684 VTWECWRRG 9 83 398.1950887918736 1191.5634369758209 3 398.1951782107353 MULTI CID FTMS 0 0 0 4159 470539.78125 0.5608100442658334 13 -0.2815971374511719 1 Unmodified _VTWECWRRG_ REV__nc|ENSG00000106479|O60290-2|ZNF862 18.1463463914782 0.3454829746528889 4 VTERE 5 -1 58.742 0.0 0.0 4.9298 0.0 0.0 0.0 574.2360933893186 574.2360933893186 47.48314963531602 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.3807196863200844 VTERE 4.9298 - 69 + 1 3.025 59755.3 1.0 627 3531 4159 HBL1_DMSO_200M_050219_2,4160 HBL1_DMSO_200M_050219_2,4160,VTWECWRRG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4163 19.722 800.0 76894.0 25 0 3459.9 + 28830 QADQVFRHCY 10 99 633.7887365526926 1265.5629201721852 2 633.7878906130791 MULTI CID FTMS 0 0 0 4162 54630.7109375 0.3163989079949157 -2 0.00885009765625 1 Unmodified _QADQVFRHCY_ REV__ENSG00000198825|ENST00000650623|INPP5F;REV__nc|ENSG00000198825|Q9Y2H2-4|INPP5F 18.1463463914782 0.5430639438673815 4 {[QG]|[NA]}G[KS][WY]QQD 10 -1 27.804 0.0 0.0 2.197 0.0 0.0 0.0 85.04164390730321 85.04164390730321 11.71733526308109 0.0 0.0 0.0 0 0.4247425010840047 0.744727494896694 0.4247425010840047 1.4749073637206092 {[QG]|[NA]}G[KS][WY]QQD 2.197 - 514 1 3.025 51437.7 0.4099999964237213 628 3533 4162 HBL1_DMSO_200M_050219_2,4163 HBL1_DMSO_200M_050219_2,4163,QADQVFRHCY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4164 19.736 800.0 115250.0 25 0 14892.0 + -1 ARTLGLEAMK 10 107 553.3051925336636 1104.595832134127 2 553.3057128787041 MULTI CID FTMS 0 0 0 4162 108457.5703125 0.3449126598279929 -13 0.1341323852539062 2 Oxidation (M) _ARTLGLEAM(Oxidation (M))K_ REV__ENSG00000148331|ENST00000277458|ASB6;REV__nc|ENSG00000148331|Q9NWX5-2|ASB6 22.65808497894818 0.4596126414678359 4 KTT[{I|L}P][WP]AK 9 -1 52.444 0.0 0.0 4.7478 0.0 0.0 63.99800764199024 0.0 63.99800764199024 0.0 39.78015617153218 0.0 0.0 0 1.8252574989159955 0.0 1.3494850021680094 0.2614393726401688 KTT[{I|L}P][WP]AK 4.7478 - 512 + 1 3.025 73298.2 0.4799999892711639 629 3533 4162 HBL1_DMSO_200M_050219_2,4164 HBL1_DMSO_200M_050219_2,4164,ARTLGLEAMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4165 19.75 800.0 35307.0 25 0 1491.6 -1 0 57 987.383599265918 1972.752645598636 2 987.8865844607352 MULTI CID FTMS 0 0 0 4162 95251.140625 0.8902060256121006 -1 0.0040664672851562 3 4 SGGGGAAHGNYGGGS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YY 19 -1 71.072 0.0 0.0 3.6027 0.0 0.0 183.0645466535172 0.0 183.0645466535172 0.0 55.49886434368756 0.0 0.0 0 0.4247425010840047 0.0 0.9247425010840048 0.0 SGGGGAAHGNYGGGS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YY 3.6027 - 3158 1 3.025 27678.4 0.3600000143051147 630 3533 4162 HBL1_DMSO_200M_050219_2,4165 HBL1_DMSO_200M_050219_2,4165, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4166 19.764 800.0 66850.0 25 0 5746.7 + -1 ISYCYTLGY 9 89 570.257196778695 1138.4998406241898 2 570.2573119997978 MULTI CID FTMS 0 0 0 4162 83830.421875 0.8881265942180487 -1 0.0040664672851562 4 Carbamidomethyl (C) _ISYC(Carbamidomethyl (C))YTLGY_ REV__ENSG00000005486|ENST00000006777|RHBDD2;REV__nc|ENSG00000005486|Q6NTF9-2|RHBDD2;REV__nc|ENSG00000005486|Q6NTF9-3|RHBDD2 18.13498045792455 0.3457906370836843 4 [VS]{[WS]|[C(Carbamidomethyl (C)){I|L}]}RNGGGGY 11 -1 [VS]{[WS]|[C(Carbamidomethyl (C)){I|L}]}R + + 27.969 -0.026975 -0.0043841 2.4567 2.4567 45.034 0.0 0.0 0.0 0.0 20.97926902225012 0.0 0.0 0 0.0 0.0 0.0 0.0 [VS]{[WS]|[C(Carbamidomethyl (C)){I|L}]}RNGGGGY 2.4567 - 165 + 1 3.025 49402.5 0.4199999868869781 631 3533 4162 HBL1_DMSO_200M_050219_2,4166 HBL1_DMSO_200M_050219_2,4166,ISYCYTLGY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4168 19.78 800.0 70730.0 25 0 21928.0 + -1 TVVEWAPMFP 10 64 596.7887454276179 1191.5629379220356 2 596.7889892458916 MULTI CID FTMS 0 0 0 4167 72568.2265625 0.3000111171056922 16 -0.2494735717773437 1 Oxidation (M) _TVVEWAPM(Oxidation (M))FP_ REV__ENSG00000105136|ENST00000221735|ZNF419;REV__ENSG00000152439|ENST00000282292|ZNF773;REV__ENST00000523439.1_1_19:58003464-58005455:+|nuORF;REV__nc|ENSG00000105136|Q96HQ0-3|ZNF419;REV__nc|ENSG00000105136|Q96HQ0-4|ZNF419;REV__nc|ENSG00000105136|Q96HQ0-5|ZNF419;REV__nc|ENSG00000152439|Q6PK81-2|ZNF773 10.823927491677226 0.6659270209832991 4 {M(Oxidation (M))|F} 1 -1 11.109 0.0 0.0 0.93233 0.0 0.0 1026.48339187887 0.0 1026.48339187887 0.0 4.872118693881546 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.93233 + + 7 + 1 3.025 46733.3 0.5899999737739563 632 3534 4167 HBL1_DMSO_200M_050219_2,4168 HBL1_DMSO_200M_050219_2,4168,TVVEWAPMFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4169 19.785 248.0 275590.0 25 0 23327.0 + 39099 TWIMMKRP 8 94 531.7845624850813 1061.5545720369626 2 531.7846557497978 MULTI CID FTMS 0 0 0 4167 165085.28125 0.579549466311013 -5 0.1095409393310546 2 Unmodified _TWIMMKRP_ REV__ENST00000464842.1_1_22:38965306-38965369:-|nuORF 19.438996006549623 0.6237395211498085 4 MSTN{[VA]|[{I|L}G]}RP 8 -1 24.862 0.0 0.0 2.342 0.0 0.0 187.1234178542232 0.0 187.1234178542232 0.0 9.12971259689116 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3807196863200844 MSTN{[VA]|[{I|L}G]}RP 2.342 - 343 + 1 3.025 57488.6 1.0 633 3534 4167 HBL1_DMSO_200M_050219_2,4169 HBL1_DMSO_200M_050219_2,4169,TWIMMKRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4170 19.799 800.0 139740.0 25 0 10921.0 + -1 KEDSVLMMV 9 128 534.2588675606964 1066.5031821881928 2 534.2584106326103 MULTI CID FTMS 0 0 0 4167 106366.0625 0.0277092423851957 -36 0.4151763916015625 3 Oxidation (M) _KEDSVLM(Oxidation (M))MV_ REV__ENSG00000183690|ENST00000420999|EFHC2 19.256988751693697 0.3154191944385105 4 [TP][PA]SSSHV{[QG]|[NA]} 11 -1 + 34.058 0.0 0.0 3.1935 3.1935 76.311 0.0 0.0 0.0 1.920051229544277 10.989220960429854 1.920051229544277 9.477437731477416 0 0.5 0.585026652029182 1.156038390922711 0.0 [TP][PA]SSSHV{[QG]|[NA]};[TP]{[CA]|SS}[PA]SHV{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}QPSSHV{[QG]|[NA]};[TP]{[CA]|SS}S[PA]HV{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}[SG][PA]SHV{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}[SG]S[PA]HV{[QG]|[NA]};[TP]V[HV]{[QC]|[C(Carbamidomethyl (C))A]}{[{M(Oxidation (M))|F}H]|[RQ]};[VP]T[HV]{[QC]|[C(Carbamidomethyl (C))A]}{[{M(Oxidation (M))|F}H]|[RQ]} 3.1935;2.3048;2.2926;2.1028;0.99248;0.79049;0.74656;0.32874 -;-;-;-;-;-;-;- 503 1 3.025 89980.2 0.4699999988079071 634 3534 4167 HBL1_DMSO_200M_050219_2,4170 HBL1_DMSO_200M_050219_2,4170,KEDSVLMMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4171 19.813 800.0 127250.0 25 0 25183.0 + 18321 KVLDQKEHRL 10 98 422.58210374389694 1264.724481831891 3 422.5821411013603 MULTI CID FTMS 0 0 0 4167 96312.2578125 1.0 0 0.0 4 Unmodified _KVLDQKEHRL_ ENSG00000197451|ENST00000358344|HNRNPAB;nc|ENSG00000197451|Q99729-3|HNRNPAB;nc|ENSG00000197451|Q99729-4|HNRNPAB;nc|ENSG00000197451|Q99729|HNRNPAB 34.221707139014875 0.2185845369562963 4 KV{I|L}DQKEH[R{I|L}] 10 0 + 63.726 0.0 0.0 5.0388 5.0388 76.456 0.0 0.0 0.0 42.64411171556502 4.884381005764311 4.884381005764311 4.771212547196626 0 0.7887254899964358 0.0 0.3494850021680094 0.5 + + KV{I|L}DQKEH[R{I|L}];K{I|L}VDQKEH[R{I|L}];KV{I|L}D[AG]KEH[R{I|L}];K{I|L}VD[AG]KEH[R{I|L}] 5.0388;4.6615;4.3141;3.9369 +;-;-;- + 230 + 1 3.025 90610.5 0.4300000071525574 635 3534 4167 HBL1_DMSO_200M_050219_2,4171 HBL1_DMSO_200M_050219_2,4171,KVLDQKEHRL False True KVLDQKEHRL 19.812508 422.58214110136 476028.34375 4167.0 ENSG00000197451|ENST00000358344|HNRNPAB;;nc|ENSG00000197451|Q99729-4|HNRNPAB;;nc|ENSG00000197451|Q99729-3|HNRNPAB;;nc|ENSG00000197451|Q99729|HNRNPAB 6.905834039052327 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4172 19.826 800.0 88494.0 25 0 9170.0 + -1 HAIPSMSHV 9 91 497.7427757407848 993.4709985483696 2 497.7428466677666 MULTI CID FTMS 0 0 0 4167 89194.8671875 0.9397577459200752 -2 0.0619831085205078 5 Oxidation (M) _HAIPSM(Oxidation (M))SHV_ nc|ENSG00000137074|Q7Z2E3|APTX;nc|ENSG00000137074|Q7Z2E3-9|APTX;nc|ENSG00000137074|Q7Z2E3-11|APTX;nc|ENSG00000137074|Q7Z2E3-4|APTX;nc|ENSG00000137074|Q7Z2E3-3|APTX;ENST00000479656.5_1_9:32974523-32984658:-|nuORF;nc|ENSG00000137074|Q7Z2E3-2|APTX;nc|ENSG00000137074|Q7Z2E3-8|APTX;ENSG00000137074|ENST00000379817|APTX;nc|ENSG00000137074|Q7Z2E3-5|APTX;nc|ENSG00000137074|Q7Z2E3-10|APTX;nc|ENSG00000137074|Q7Z2E3-6|APTX 36.04419817259434 0.0971720506436186 4 HA{I|L}V[EC]SHV 9 -1 + 58.443 0.0 0.0 5.8828 5.8828 89.693 0.0 0.0 0.0 46.677441396679455 7.280156171532184 7.280156171532184 29.99745428442324 0 1.079689690656103 1.6989700043360187 0.8807196863200843 0.0 HA{I|L}V[EC]SHV;[HA][TP]{[YC]|[HE]}[R{M(Oxidation (M))|F}] 5.8828;2.8633 -;- 140 + 1 3.025 59403.6 0.4399999976158142 636 3534 4167 HBL1_DMSO_200M_050219_2,4172 HBL1_DMSO_200M_050219_2,4172,HAIPSMSHV False False HAIPSMSHV 19.826322 497.742846667767 752955.8125 4167.0 nc|ENSG00000137074|Q7Z2E3|APTX;;nc|ENSG00000137074|Q7Z2E3-9|APTX;;nc|ENSG00000137074|Q7Z2E3-11|APTX;;nc|ENSG00000137074|Q7Z2E3-4|APTX;;nc|ENSG00000137074|Q7Z2E3-3|APTX;;ENST00000479656.5_1_9:32974523-32984658:-|nuORF;;nc|ENSG00000137074|Q7Z2E3-2|APTX;;nc|ENSG00000137074|Q7Z2E3-8|APTX;;ENSG00000137074|ENST00000379817|APTX;;nc|ENSG00000137074|Q7Z2E3-5|APTX;;nc|ENSG00000137074|Q7Z2E3-10|APTX;;nc|ENSG00000137074|Q7Z2E3-6|APTX 7.320921897888184 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4173 19.84 800.0 176180.0 25 0 14338.0 + 10405 FSYIDLLSSAN 11 121 615.3042338906827 1228.5939148481652 2 615.3038207888603 MULTI CID FTMS 0 0 0 4167 87272.375 0.1585753950223498 -10 0.1741809844970703 6 Unmodified _FSYIDLLSSAN_ REV__ENSG00000166197|ENST00000605788|NOLC1;REV__nc|ENSG00000166197|Q14978-2|NOLC1;REV__nc|ENSG00000166197|Q14978-3|NOLC1 41.95555342248728 0.1822715950200113 4 DP[WK]PSQSAN 10 -1 87.488 0.0 0.0 7.121 0.0 0.0 100.06416518379062 0.0 100.06416518379062 0.0 43.08620914378093 0.0 0.0 0 2.0283773187068794 0.0 2.9604093769761874 0.0 DP[WK]PSQSAN 7.121 - 3326 1 3.025 106647.0 0.4199999868869781 637 3534 4167 HBL1_DMSO_200M_050219_2,4173 HBL1_DMSO_200M_050219_2,4173,FSYIDLLSSAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4175 19.855 651.0 150140.0 25 0 19582.0 -1 EKKLQNTMK 9 88 568.3102328550845 1134.6059127769688 2 568.3104736208916 MULTI CID FTMS 0 0 0 4174 122890.6328125 0.5838227658202784 -1 0.0762920379638671 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 4 KTT[{I|L}P]T[WP]K 9 -1 49.619 0.0 0.0 4.3733 0.0 0.0 63.99718801078945 0.0 63.99718801078945 0.0 38.16569691289537 0.0 0.0 0 1.8494850021680087 0.0 1.579689690656103 0.5484550065040282 KTT[{I|L}P]T[WP]K 4.3733 - 195 + 1 3.025 76327.5 1.0 638 3535 4174 HBL1_DMSO_200M_050219_2,4175 HBL1_DMSO_200M_050219_2,4175,EKKLQNTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4176 19.869 800.0 125910.0 25 0 15306.0 + 16600 KDVDGAYMT 9 123 508.22352499033394 1014.432497047468 2 508.2238952517509 MULTI CID FTMS 0 0 0 4174 143706.359375 0.5991477271431785 -9 0.2304458618164062 2 Oxidation (M) _KDVDGAYM(Oxidation (M))T_ CON__P04264;ENSG00000167768|ENST00000252244|KRT1 55.50274090549119 0.0285720310785888 4 DVDQYT{M(Oxidation (M))|F} 7 5 58.907 0.0 0.0 5.8069 0.0 0.0 128.09521681953282 0.0 128.09521681953282 0.0 37.48773768811724 0.0 0.0 0 0.4247425010840047 0.0 1.860924374808178 0.0 DVDQYT{M(Oxidation (M))|F} 5.8069 - 1323 1 3.025 79118.5 0.550000011920929 639 3535 4174 HBL1_DMSO_200M_050219_2,4176 HBL1_DMSO_200M_050219_2,4176,KDVDGAYMT True False KDVDGAYMT 19.869191 508.223895251751 1392371.25 4174.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 6.711887677510579 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 4178 19.88 448.0 144140.0 25 0 18998.0 + 31941 RVDKNAPTV 9 81 500.2832717365496 998.5519905398992 2 500.2834960818291 MULTI CID FTMS 0 0 0 4177 150817.46875 0.3551430279279956 4 -0.0855693817138671 1 Unmodified _RVDKNAPTV_ ENSG00000102879|ENST00000219150|CORO1A;ENST00000568982.5_1_16:30195026-30198313:+|nuORF;ENST00000569469.1_1_16:30195026-30198371:+|nuORF 34.93206674587334 0.1032771302489716 4 V{M(Oxidation (M))|F}PA 4 7 42.652 0.0 0.0 4.2713 0.0 0.0 0.0 581.3111666315061 581.3111666315061 5.994850021680094 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 V{M(Oxidation (M))|F}PA 4.2713 - 110 + 1 3.025 55284.9 1.0 640 3536 4177 HBL1_DMSO_200M_050219_2,4178 HBL1_DMSO_200M_050219_2,4178,RVDKNAPTV True True RVDKNAPTV 19.879682 500.283496081829 4482687.0 4177.0 ENST00000568982.5_1_16:30195026-30198313:+|nuORF;;chr16:30183725-30186598|15|20.67|0.24|6.45|+|0|CORO1A,CORO1A|1;;ENST00000569469.1_1_16:30195026-30198371:+|nuORF;;ENSG00000102879|ENST00000219150|CORO1A 6.722535610198975 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4179 19.894 800.0 49259.0 25 0 9731.7 -1 0 45 1132.4371128527912 3394.2895091585738 3 1133.439624011517 MULTI CID FTMS 0 0 0 4177 103336.2265625 1.0 0 0.0 2 4 P 1 -1 6.9897 0.0 0.0 0.20593 0.0 0.0 2145.762909703421 1148.4342745416627 3294.197184245084 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.20593 - 6 + 1 3.025 38351.2 0.3400000035762787 641 3536 4177 HBL1_DMSO_200M_050219_2,4179 HBL1_DMSO_200M_050219_2,4179, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4180 19.907 800.0 29010.0 25 0 5005.3 -1 0 27 1137.4321610921725 3409.274653876718 3 1138.431933581829 MULTI CID FTMS 0 0 0 4177 65263.1171875 1.0 0 0.0 3 4 Y 1 -1 5.4846 0.0 0.0 0.16087 0.0 0.0 1309.4555143276928 1933.7298067682248 3243.185321095918 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.16087 - 4 + 1 3.025 27694.7 0.2899999916553497 642 3536 4177 HBL1_DMSO_200M_050219_2,4180 HBL1_DMSO_200M_050219_2,4180, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4181 19.921 800.0 23132.0 25 0 5884.2 -1 0 33 1142.7507013141526 3425.2302745426578 3 1143.083789050579 MULTI CID FTMS 0 0 0 4177 64780.875 1.0 0 0.0 4 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20407 0.0 0.0 2053.5902121420704 1221.5413302057252 3275.1315423477954 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20407 - 4 + 1 3.025 24411.0 0.2800000011920929 643 3536 4177 HBL1_DMSO_200M_050219_2,4181 HBL1_DMSO_200M_050219_2,4181, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4183 19.927 188.0 744310.0 25 0 187850.0 -1 0 47 1125.112508828004 3372.315697084212 3 1125.447680652142 MULTI CID FTMS 0 0 0 4182 1258711.125 0.8139304086598403 1 -0.0200366973876953 1 4 E 1 -1 6.9897 0.0 0.0 0.20727 0.0 0.0 2716.0879146267685 524.1632080212427 3240.251122648011 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20727 - 23 + 1 3.025 121346.1 1.0 644 3537 4182 HBL1_DMSO_200M_050219_2,4183 HBL1_DMSO_200M_050219_2,4183, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4184 19.941 800.0 104930.0 25 0 14023.0 + 35023 SQQASPQTV 9 104 473.2355218260361 944.4564907188724 2 473.2353393435478 MULTI CID FTMS 0 0 0 4182 79871.578125 0.3452383066956476 6 -0.0512542724609375 2 Unmodified _SQQASPQTV_ ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400 57.72198328787511 0.0273433238377839 4 [AG]SQA 5 6 27.434 0.0 0.0 2.9047 0.0 0.0 0.0 527.2473897269379 527.2473897269379 0.1781558214835144 0.0 0.0 0.0 0 0.3807196863200844 1.3010299956639813 0.5866968715561641 0.3807196863200844 [AG]SQA 2.9047 - 249 1 3.025 69946.5 0.5699999928474426 645 3537 4182 HBL1_DMSO_200M_050219_2,4184 HBL1_DMSO_200M_050219_2,4184,SQQASPQTV True True SQQASPQTV 19.941301 473.235339343548 3248677.25 4182.0 nc|ENSG00000183495|Q96L91-4|EP400;;nc|ENSG00000183495|Q96L91-3|EP400;;nc|ENSG00000183495|Q96L91|EP400;;nc|ENSG00000183495|Q96L91-5|EP400;;ENSG00000183495|ENST00000389561|EP400 7.324017842610677 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4186 19.947 71.0 1016600.0 25 0 164380.0 + 44310 YLNAFRHL 8 68 345.1898524230684 1032.5477278694052 3 345.1895629763603 MULTI CID FTMS 0 0 0 4185 706416.25 0.8813342787122791 -2 0.072122573852539 1 Unmodified _YLNAFRHL_ REV__nc|ENSG00000118322|O94823-3|ATP10B 10.073929032068715 0.7620901558688216 4 Y{I|L}NP 4 -1 38.928 0.0 0.0 3.7701 0.0 0.0 0.0 542.2702730768186 542.2702730768186 27.496140821749226 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 Y{I|L}NP 3.7701 - 62 + 1 3.025 68936.7 1.0 646 3538 4185 HBL1_DMSO_200M_050219_2,4186 HBL1_DMSO_200M_050219_2,4186,YLNAFRHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4187 19.951 202.0 382520.0 25 0 49360.0 + -1 IQRLETMK 8 76 517.7862120437948 1033.5578711543894 2 517.7864868044853 MULTI CID FTMS 0 0 0 4185 342295.9375 0.0833449345193955 14 -0.0924148559570312 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 29.081581746732265 0.4323690340403521 4 KTT[{I|L}P][WP]K 8 -1 38.466 0.0 0.0 3.7217 0.0 0.0 63.9970861178785 0.0 63.9970861178785 0.0 24.0018312907727 0.0 0.0 0 0.8494850021680094 0.0 1.305462187404089 0.2302046884880938 KTT[{I|L}P][WP]K 3.7217 - 114 + 1 3.025 66482.8 1.0 647 3538 4185 HBL1_DMSO_200M_050219_2,4187 HBL1_DMSO_200M_050219_2,4187,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4192 19.973 409.0 213570.0 25 0 59000.0 + -1 CLVPPAPVS 9 68 470.2524778399144 0 470.2468139529228 PEAK CID FTMS 0 0 0 4191 96632.125 0.7702857046062529 -3 0.0119705200195312 1 Carbamidomethyl (C) _C(Carbamidomethyl (C))LVPPAPVS_ REV__ENSG00000172059|ENST00000305883|KLF11;REV__nc|ENSG00000172059|O14901-2|KLF11 4.3292370932331545 0.3444685223463734 4 V 1 -1 0.48455 0.0 0.0 0.051631 0.0 0.0 635.3049912249476 201.0887697809204 836.3937610058679 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.051631 + + 1 + 1 3.025 71323.9 1.0 648 3542 4191 HBL1_DMSO_200M_050219_2,4192 HBL1_DMSO_200M_050219_2,4192,CLVPPAPVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4194 19.979 188.0 346000.0 25 0 50734.0 + 40215 VGRKELEQF 9 81 553.3051925336636 1104.595832134127 2 553.3054077029228 MULTI CID FTMS 0 0 0 4193 291244.34375 0.9262042379635832 -3 0.017770767211914 1 Unmodified _VGRKELEQF_ REV__ENSG00000115919|ENST00000264170|KYNU 13.042465956692816 0.4836390050082244 4 [KT][RD][{I|L}P]TTK 9 -1 34.912 0.0 0.0 3.1606 0.0 0.0 0.0 60.97455478058865 60.97455478058865 11.207699359098704 0.0 0.0 0.0 0 1.0 0.0 1.6549471895720984 0.0 [KT][RD][{I|L}P]TTK 3.1606 - 235 1 3.025 54594.0 1.0 649 3543 4193 HBL1_DMSO_200M_050219_2,4194 HBL1_DMSO_200M_050219_2,4194,VGRKELEQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4199 20.005 684.0 122300.0 25 0 22687.0 42162 VSCYIDYNI 9 78 545.2495509410867 1088.4845489489733 2 545.2492553591728 MULTI CID FTMS 0 0 0 4198 84452.671875 0.481834518328709 -37 0.5542049407958984 1 Unmodified _VSCYIDYNI_ ENSG00000130714|ENST00000402686|POMT1;nc|ENSG00000130714|Q9Y6A1-3|POMT1;nc|ENSG00000130714|Q9Y6A1-4|POMT1;nc|ENSG00000130714|Q9Y6A1|POMT1 7.289230182591677 0.6602208344931196 4 VP 2 8 30.744 0.0 0.0 2.8245 0.0 0.0 0.0 889.3399141900999 889.3399141900999 9.54658748045967 0.0 0.0 0.0 0 0.1694451763165201 0.958607314841775 0.0 0.0 VP 2.8245 - 54 + 1 3.025 70843.4 1.0 650 3547 4198 HBL1_DMSO_200M_050219_2,4199 HBL1_DMSO_200M_050219_2,4199,VSCYIDYNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4203 20.03 800.0 80605.0 25 0 4158.2 + 4991 DGTGTRTI 8 107 410.7112682712756 819.4079836093512 2 410.7117187380791 MULTI CID FTMS 0 0 0 4202 77813.8984375 0.7923876621730237 1 -0.0163536071777343 1 Unmodified _DGTGTRTI_ ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1 24.020572477871973 0.5389365498350341 4 [DG]TH 4 5 24.385 0.0 0.0 2.976 0.0 0.0 0.0 406.22100786155744 406.22100786155744 1.1978875828839364 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.0 [DG]TH 2.976 - 55 1 3.025 54140.6 0.449999988079071 651 3550 4202 HBL1_DMSO_200M_050219_2,4203 HBL1_DMSO_200M_050219_2,4203,DGTGTRTI False True DGTGTRTI 20.029694 410.711718738079 700269.9375 4202.0 nc|ENSG00000163349|Q86Z02-3|HIPK1;;nc|ENSG00000163349|Q86Z02-4|HIPK1;;ENSG00000163349|ENST00000426820|HIPK1;;nc|ENSG00000163349|Q86Z02-2|HIPK1 0.6588077396154404 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4206 20.039 19.0 1850300.0 25 0 280390.0 25686 NHGLSENPSL 10 64 534.2588675606964 1066.5031821881928 2 534.2590209841728 MULTI CID FTMS 0 0 0 4205 2766554.5 0.7207104165612422 -18 0.2698593139648437 1 Unmodified _NHGLSENPSL_ ENSG00000156920|ENST00000394143|ADGRG4;nc|ENSG00000156920|Q8IZF6-2|ADGRG4;nc|ENSG00000156920|Q8IZF6-3|ADGRG4 8.745405648335112 0.6861838735306406 4 SSHV{[QG]|[NA]} 6 9 34.456 0.0 0.0 3.2307 0.0 0.0 453.2227650373063 0.0 453.2227650373063 0.0 21.691337174839767 0.0 0.0 0 0.5 0.0 0.7059771852360797 0.0 SSHV{[QG]|[NA]} 3.2307 - 31 1 3.025 37472.6 1.0 652 3552 4205 HBL1_DMSO_200M_050219_2,4206 HBL1_DMSO_200M_050219_2,4206,NHGLSENPSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4207 20.047 476.0 196110.0 25 0 22183.0 27331 PHSPLPGALSS 11 100 531.7845624850813 1061.5545720369626 2 531.7845336794853 MULTI CID FTMS 0 0 0 4205 198108.0 0.6954792383826899 13 -0.1222724914550781 2 Unmodified _PHSPLPGALSS_ ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:32002284-32014401:+|nuORF;ENST00000474741.5_1_22:32009833-32014520:+|nuORF;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-5|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1 13.042465956692816 0.7638483625850725 4 KTE[{I|L}P][WP]K 8 8 30.737 0.0 0.0 2.8955 0.0 0.0 63.99880614698788 0.0 63.99880614698788 0.0 5.987672155882109 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.6307196863200843 KTE[{I|L}P][WP]K 2.8955 - 227 + 1 3.025 77823.0 1.0 653 3552 4205 HBL1_DMSO_200M_050219_2,4207 HBL1_DMSO_200M_050219_2,4207,PHSPLPGALSS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4208 20.061 800.0 196020.0 25 0 12506.0 + 24723 MPDDHARKI 9 162 361.5185911841719 1081.5339441527158 3 361.5180236697197 MULTI CID FTMS 0 0 0 4205 84200.6875 0.0228831757512064 -22 0.3527336120605469 3 Unmodified _MPDDHARKI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 39.94969957227396 0.0757326808254658 4 MPDDHARK{I|L} 9 0 + 58.599 0.0 0.0 5.4181 5.4181 79.561 0.0 0.0 0.0 16.478174818886373 6.074600214844175 6.074600214844175 6.074600214844175 0 0.0 0.0 0.7742275032520141 0.3054621874040891 + + MPDDHARK{I|L};MPDDHAR{I|L}K;MPDDH[RK]A{I|L};MPD{I|L}AGH[RV]S;M{I|L}WPGH[QT]{I|L};MPD{I|L}QH[RV]S;M{I|L}WPGH{[SA]|[TG]}A{I|L};M{I|L}WPGH[DV]K;M{I|L}WPGHAAS{I|L};MP[W{I|L}]GH[QT]{I|L} 5.4181;4.8564;4.6563;4.3426;4.0234;4.017;3.7924;3.4618;3.3683;3.0959 +;-;-;-;-;-;-;-;-;- + 946 + 1 3.025 129733.1 0.8799999952316284 654 3552 4205 HBL1_DMSO_200M_050219_2,4208 HBL1_DMSO_200M_050219_2,4208,MPDDHARKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4212 20.075 196.0 245130.0 25 0 32523.0 + -1 CFHFVSSM 8 79 515.7105602067862 1029.4065674803724 2 515.7109863162041 MULTI CID FTMS 0 0 0 4211 340154.9375 0.1444144749899964 -16 0.1179218292236328 1 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))FHFVSSM(Oxidation (M))_ REV__ENSG00000110628|ENST00000649076|SLC22A18 14.581692164780916 0.6954967302934248 4 SS{M(Oxidation (M))|F} 3 -1 27.307 0.0 0.0 2.6527 0.0 0.0 690.2963817887693 0.0 690.2963817887693 0.0 17.09183145787911 0.0 0.0 0 0.0 0.0 0.6505149978319906 0.0 SS{M(Oxidation (M))|F} 2.6527 + + 52 + 1 3.025 42871.0 1.0 655 3555 4211 HBL1_DMSO_200M_050219_2,4212 HBL1_DMSO_200M_050219_2,4212,CFHFVSSM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4213 20.081 357.0 142100.0 25 0 12830.0 + 10406 FSYIDLLSSAN 11 70 615.3042338906827 1228.5939148481652 2 615.3043090701103 MULTI CID FTMS 0 0 0 4211 225058.703125 0.4089355050927014 11 -0.1037540435791015 2 Unmodified _FSYIDLLSSAN_ REV__ENSG00000166197|ENST00000605788|NOLC1;REV__nc|ENSG00000166197|Q14978-2|NOLC1;REV__nc|ENSG00000166197|Q14978-3|NOLC1 28.49450938151212 0.4231428536161201 4 DPSQSAN 7 -1 70.323 0.0 0.0 5.7239 0.0 0.0 511.2969837873063 0.0 511.2969837873063 0.0 46.2328135800859 0.0 0.0 0 1.0 0.0 1.674742501084005 0.0 DPSQSAN 5.7239 - 327 1 3.025 45058.5 1.0 656 3555 4211 HBL1_DMSO_200M_050219_2,4213 HBL1_DMSO_200M_050219_2,4213,FSYIDLLSSAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4219 20.114 800.0 128650.0 25 0 19307.0 -1 SYATLICM 8 109 459.2096931294596 916.4048333257192 2 459.2091552615166 MULTI CID FTMS 0 0 0 4218 72475.8046875 0.3528190333958097 -9 0.0678272247314453 1 Oxidation (M) _SYATLICM(Oxidation (M))_ ENSG00000129654|ENST00000322957|FOXJ1 12.531546534597751 0.7257836412119636 4 HA[MT] 4 -1 21.114 0.0 0.0 2.304 0.0 0.0 458.2085133283219 0.0 458.2085133283219 0.0 10.145228064085998 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 HA[MT] 2.304 - 76 1 3.025 83586.5 0.4399999976158142 657 3560 4218 HBL1_DMSO_200M_050219_2,4219 HBL1_DMSO_200M_050219_2,4219,SYATLICM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4223 20.138 800.0 80283.0 25 0 5472.1 + 31482 RPWYWEWCTWQ 11 82 820.8553649082523 1639.6961768833046 2 820.8570434451103 MULTI CID FTMS 0 0 0 4222 75568.7578125 0.1905106341509223 -12 0.0920524597167968 1 Unmodified _RPWYWEWCTWQ_ REV__ENST00000409198.5_2_2:152506865-152507290:-|nuORF 1.1933415558491238 0.8695176722560516 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE 14 -1 + 91.468 0.0 0.0 5.5784 5.5784 71.068 0.0 0.0 0.0 64.63238239186943 15.066881530726135 15.066881530726135 0.4865483048447316 0 0.8935078169319297 0.0 2.3895840698003 0.8494850021680094 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE;[EP]AEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]Q{M(Oxidation (M))|F}QNAE;[EP]AEQY[YV]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]Q{M(Oxidation (M))|F}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA[RD]T{M(Oxidation (M))|F}QNAE;{[CP]|[EA]}PEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA[RD]T{M(Oxidation (M))|F}QGGAE 5.5784;5.5487;5.3913;5.1717;5.1454;4.9833;4.9596;4.8626;4.797;4.7725 -;-;-;-;-;-;-;-;-;- 3133 + 1 3.025 51970.3 0.4199999868869781 658 3563 4222 HBL1_DMSO_200M_050219_2,4223 HBL1_DMSO_200M_050219_2,4223,RPWYWEWCTWQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4224 20.152 800.0 109490.0 25 0 12160.0 + 24726 MPDDHARKI 9 89 541.7739573338683 1081.5333617345366 2 541.7748901247978 MULTI CID FTMS 0 0 0 4222 94473.2734375 0.169408002018229 -11 0.0880203247070312 2 Unmodified _MPDDHARKI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 47.594388314883695 0.0456443387682827 4 MPDDHAR[K{I|L}] 9 0 + 78.695 0.0 0.0 7.2762 7.2762 95.838 0.0 0.0 0.0 61.70486885197654 4.137342758552691 4.137342758552691 78.69456889533673 0 1.4604093769761874 1.3010299956639813 0.4247425010840047 0.0 + + MPDDHAR[K{I|L}] 7.2762 + + 101 + 1 3.025 77004.8 0.4799999892711639 659 3563 4222 HBL1_DMSO_200M_050219_2,4224 HBL1_DMSO_200M_050219_2,4224,MPDDHARKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4227 20.172 800.0 121420.0 25 0 15008.0 -1 EKKLQNTMK 9 97 568.3102598209341 1134.605966708668 2 568.3108398318291 MULTI CID FTMS 0 0 0 4226 73129.515625 0.1273742953207315 -19 0.1692028045654297 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 22.736283301280096 0.2418982879461534 4 KTT 3 -1 35.177 0.0 0.0 3.1004 0.0 0.0 63.99731768451654 737.3951545151009 801.3924721996175 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 1.3494850021680094 0.0 KTT 3.1004 - 179 + 1 3.025 79834.9 0.4600000083446502 660 3565 4226 HBL1_DMSO_200M_050219_2,4227 HBL1_DMSO_200M_050219_2,4227,EKKLQNTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4230 20.194 800.0 43678.0 25 0 12061.0 -1 0 25 1125.112508828004 3372.315697084212 3 1125.445727527142 MULTI CID FTMS 0 0 0 4229 68846.71875 0.0445189025615997 31 -0.4603252410888672 1 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20727 0.0 0.0 2000.6933348789369 1221.5427857162647 3222.2361205952016 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20727 - 1 + 1 3.03 37791.8 0.3300000131130218 661 3567 4229 HBL1_DMSO_200M_050219_2,4230 HBL1_DMSO_200M_050219_2,4230, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4231 20.208 800.0 64613.0 25 0 7022.7 + 39674 VEEKDPQSTN 10 96 573.766977767255 1145.5194026013098 2 573.7665893435478 MULTI CID FTMS 0 0 0 4229 85310.515625 1.0 0 0.0 2 Unmodified _VEEKDPQSTN_ REV__nc|ENSG00000105429|Q7Z7M0-2|MEGF8 34.93206674587334 0.2110832994570416 4 {[MG]|[TS]}[{I|L}P]DPSQSTN 11 -1 {[MG]|[TS]}[{I|L}P]DPSQ + + 43.742 16.163 1.9583 3.8185 3.8185 48.066 0.0 0.0 0.0 0.0 21.034539788859945 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.3252574989159953 {[MG]|[TS]}[{I|L}P]DPSQSTN 3.8185 - 230 + 1 3.03 45044.6 0.4300000071525574 662 3567 4229 HBL1_DMSO_200M_050219_2,4231 HBL1_DMSO_200M_050219_2,4231,VEEKDPQSTN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4233 20.213 102.0 843760.0 25 0 135680.0 + 44231 YLHQGLRF 8 68 345.1898524230684 1032.5477278694052 3 345.1894103884697 MULTI CID FTMS 0 0 0 4232 505625.09375 0.6308245702147774 28 -0.3949661254882812 1 Unmodified _YLHQGLRF_ REV__ENSG00000165731|ENST00000355710|RET;REV__nc|ENSG00000165731|P07949-2|RET 10.073929032068715 0.7620901558688216 4 Y{I|L} 2 -1 20.969 0.0 0.0 2.0308 0.0 0.0 0.0 753.376667486182 753.376667486182 13.979400086720377 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 2.0308 + + 46 + 1 3.03 78513.8 1.0 663 3568 4232 HBL1_DMSO_200M_050219_2,4233 HBL1_DMSO_200M_050219_2,4233,YLHQGLRF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4234 20.227 800.0 161030.0 25 0 70175.0 -1 0 103 490.2832994490794 489.2760229824794 1 490.2830383181572 MULTI CID FTMS 0 0 0 4232 118319.140625 0.5634939515980505 51 -0.7146587371826172 2 4 Y 1 -1 11.783 0.0 0.0 2.4082 0.0 0.0 308.2028093367747 0.0 308.2028093367747 0.0 1.2981865525287797 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.4082 - 33 + 1 3.03 102811.5 0.4900000095367431 664 3568 4232 HBL1_DMSO_200M_050219_2,4234 HBL1_DMSO_200M_050219_2,4234, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4235 20.238 643.0 120430.0 25 0 20174.0 + -1 NETNQGCTE 9 116 526.7020409517997 1051.3895289703994 2 526.7018920779228 MULTI CID FTMS 0 0 0 4232 111012.46875 0.8843328237954403 -6 0.0899257659912109 3 Carbamidomethyl (C) _NETNQGC(Carbamidomethyl (C))TE_ REV__ENSG00000196460|ENST00000428343|RFX8;REV__nc|ENSG00000196460|Q6ZV50-2|RFX8;REV__nc|ENSG00000196460|Q6ZV50|RFX8 17.11289562659939 0.3734572693229295 4 QEQ{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5 -1 42.779 0.0 0.0 4.0688 0.0 0.0 354.1178456037125 0.0 354.1178456037125 0.0 2.2974147346597107 0.0 0.0 0 0.5 0.0 0.6549471895720984 0.3807196863200844 QEQ{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4.0688 - 348 1 3.03 63035.0 1.0 665 3568 4232 HBL1_DMSO_200M_050219_2,4235 HBL1_DMSO_200M_050219_2,4235,NETNQGCTE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4236 20.252 800.0 96418.0 25 0 9833.3 -1 0 57 628.784965870225 2511.1107576145 4 629.2863647341728 MULTI CID FTMS 0 0 0 4232 67293.7890625 0.7344197855999545 -6 0.0899257659912109 4 4 DV 2 -1 17.474 0.0 0.0 0.69588 0.0 0.0 1667.744606159573 626.2503145807249 2293.994920740298 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 DV 0.69588 - 12 + 1 3.03 66240.0 0.3700000047683716 666 3568 4232 HBL1_DMSO_200M_050219_2,4236 HBL1_DMSO_200M_050219_2,4236, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4238 20.259 239.0 353660.0 25 0 38797.0 -1 MIVPILEKM 9 100 553.3051925336636 1104.595832134127 2 553.3054687380791 MULTI CID FTMS 0 0 0 4237 237071.5 0.7539258107922777 23 -0.2902679443359375 1 2 Oxidation (M) _M(Oxidation (M))IVPILEKM(Oxidation (M))_ ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-2|ILK;nc|ENSG00000166333|Q13418-3|ILK 15.847184025352805 0.4077185912009129 4 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 41.589 0.0 0.0 3.7651 3.7651 80.891 0.0 0.0 0.0 3.1234684152074976 26.498719426104746 3.1234684152074976 23.054621874040887 0 1.5 0.0 0.9476212463643424 0.0 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[{I|L}P][RD]{M(Oxidation (M))|F}K 3.7651;1.678 -;- 150 1 3.03 65130.1 1.0 667 3569 4237 HBL1_DMSO_200M_050219_2,4238 HBL1_DMSO_200M_050219_2,4238,MIVPILEKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4239 20.265 348.0 166320.0 25 0 21617.0 + -1 MYFSVEIQG 9 73 545.2495509410867 1088.4845489489733 2 545.2493163943291 MULTI CID FTMS 0 0 0 4237 155122.578125 0.88503313220683 -15 0.1869926452636718 2 Oxidation (M) _M(Oxidation (M))YFSVEIQG_ REV__ENST00000475375.1_1_13:53010343-53024741:-|nuORF 7.289230182591677 0.6602208344931196 4 PV{[QG]|[NA]} 4 -1 21.198 0.0 0.0 1.9475 0.0 0.0 689.2837391584 0.0 689.2837391584 0.0 21.197887582883936 0.0 0.0 0 0.5 0.0 0.0 0.0 PV{[QG]|[NA]} 1.9475 - 8 1 3.03 48559.1 1.0 668 3569 4237 HBL1_DMSO_200M_050219_2,4239 HBL1_DMSO_200M_050219_2,4239,MYFSVEIQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4240 20.271 324.0 416160.0 25 0 39067.0 + 39266 VAARMRHI 8 119 318.5201972681585 952.5387624046756 3 318.5200683474541 MULTI CID FTMS 0 0 0 4237 178625.1875 0.669277031691569 -4 0.0957622528076171 3 Unmodified _VAARMRHI_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 26.34127834903884 0.4900704351052977 4 VA{I|L}N 4 6 46.549 0.0 0.0 4.8869 0.0 0.0 0.0 552.2721041315061 552.2721041315061 34.33077757667817 0.0 0.0 0.0 0 0.0843105420796064 1.2218487496163564 0.0 0.805462187404089 VA{I|L}N 4.8869 - 106 + 1 3.03 114924.5 1.0 669 3569 4237 HBL1_DMSO_200M_050219_2,4240 HBL1_DMSO_200M_050219_2,4240,VAARMRHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4241 20.285 800.0 94082.0 25 0 20529.0 + -1 VDSMCGMHSP 10 94 560.7150544706908 1119.4155560081815 2 560.7149536013603 MULTI CID FTMS 0 0 0 4237 107650.125 1.0 0 0.0 4 Carbamidomethyl (C) _VDSMC(Carbamidomethyl (C))GMHSP_ REV__ENSG00000151615|ENST00000281321|POU4F2;REV__nc|ENSG00000151615|Q12837-2|POU4F2 3.5964929083625545 0.7100006075494749 4 K 1 -1 13.554 0.0 0.0 1.2108 0.0 0.0 973.309642777516 0.0 973.309642777516 0.0 4.970251941750732 0.0 0.0 0 0.0 0.0 0.0 0.1079495689832512 K 1.2108 - 26 + 1 3.03 63328.7 0.4600000083446502 670 3569 4237 HBL1_DMSO_200M_050219_2,4241 HBL1_DMSO_200M_050219_2,4241,VDSMCGMHSP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4242 20.299 800.0 167940.0 25 0 16032.0 -1 0 49 503.2296890886156 2511.112063110078 5 503.4307739138603 MULTI CID FTMS 0 0 0 4237 88127.421875 0.8786493909834044 -16 0.1910133361816406 5 4 D 1 -1 11.99 0.0 0.0 0.47747 0.0 0.0 1667.7460185574998 725.316131321587 2393.062149879087 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 D 0.47747 - 4 + 1 3.03 114767.2 0.9300000071525574 671 3569 4237 HBL1_DMSO_200M_050219_2,4242 HBL1_DMSO_200M_050219_2,4242, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4244 20.303 16.0 2161000.0 25 0 343470.0 + 27179 PGDTAVSQHVG 11 52 534.2588675606964 1066.5031821881928 2 534.2590209841728 MULTI CID FTMS 0 0 0 4243 3838649.25 1.0 0 0.0 1 Unmodified _PGDTAVSQHVG_ REV__ENSG00000115286|ENST00000233627|NDUFS7;REV__ENST00000436115.6_1_19:1383907-1389591:+|nuORF;REV__ENST00000538523.5_1_19:1387763-1393403:+|nuORF;REV__ENST00000538662.5_1_19:1383907-1391085:+|nuORF;REV__ENST00000545446.5_1_19:1383907-1388593:+|nuORF;REV__nc|ENSG00000115286|O75251-2|NDUFS7 5.296884461304476 0.8501568894076437 4 SSHV{[QG]|[NA]} 6 -1 34.698 0.0 0.0 3.2534 0.0 0.0 453.2205982892594 0.0 453.2205982892594 0.0 21.933612207359907 0.0 0.0 0 0.5 0.0 0.7302046884880937 0.0 SSHV{[QG]|[NA]} 3.2534 - 44 1 3.03 36227.2 1.0 672 3570 4243 HBL1_DMSO_200M_050219_2,4244 HBL1_DMSO_200M_050219_2,4244,PGDTAVSQHVG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4245 20.309 333.0 254730.0 25 0 28692.0 -1 KPRRQCMK 8 111 531.7845624850813 1061.5545720369626 2 531.7846557497978 MULTI CID FTMS 0 0 0 4243 231450.609375 0.8125320205712766 31 -0.4022483825683594 2 Oxidation (M) _KPRRQCM(Oxidation (M))K_ ENST00000339296.9_1_3:40567285-40570826:+|nuORF 16.942295170755138 0.6606234159769251 4 {M(Oxidation (M))|F}K 2 -1 24.922 0.0 0.0 2.3476 0.0 0.0 768.4129227223126 0.0 768.4129227223126 0.0 13.01288976963658 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.2614393726401688 {M(Oxidation (M))|F}K 2.3476 + + 133 + 1 3.03 67412.2 1.0 673 3570 4243 HBL1_DMSO_200M_050219_2,4245 HBL1_DMSO_200M_050219_2,4245,KPRRQCMK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4246 20.322 710.0 118850.0 25 0 6354.4 + -1 MPDDHARKI 9 119 366.8510388433687 1097.531287130306 3 366.8500549197197 MULTI CID FTMS 0 0 0 4243 114808.1796875 0.8948257627206162 -6 0.1465816497802734 3 Oxidation (M) _M(Oxidation (M))PDDHARKI_ nc|ENSG00000052841|Q96AE7-2|TTC17;ENSG00000052841|ENST00000039989|TTC17 5.047519993296601 0.7384778003432404 4 AHDDPE 6 -1 31.604 0.0 0.0 2.8796 0.0 0.0 415.2922535626969 0.0 415.2922535626969 0.0 20.344902840322625 0.0 0.0 0 0.0 0.0 0.0 0.0 AHDDPE 2.8796 - 43 1 3.03 70510.5 1.0 674 3570 4243 HBL1_DMSO_200M_050219_2,4246 HBL1_DMSO_200M_050219_2,4246,MPDDHARKI False False MPDDHARKI 20.321703 366.85005491972 1273277.125 4243.0 nc|ENSG00000052841|Q96AE7-2|TTC17;;ENSG00000052841|ENST00000039989|TTC17 6.447574933369954 3.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4248 20.326 14.0 3357500.0 25 0 461640.0 + 24724 MPDDHARKI 9 61 361.5185911841719 1081.5339441527158 3 361.5185119509697 MULTI CID FTMS 0 0 0 4247 3345342.75 0.9091620076887658 -3 0.1138362884521484 1 Unmodified _MPDDHARKI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 21.53697664764585 0.2571576504437394 4 MPDDHA 6 3 51.899 0.0 0.0 4.7986 0.0 0.0 0.0 412.2692965143188 412.2692965143188 24.45168783987789 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 + MPDDHA 4.7986 + + 27 + 1 3.03 44270.1 1.0 675 3571 4247 HBL1_DMSO_200M_050219_2,4248 HBL1_DMSO_200M_050219_2,4248,MPDDHARKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4249 20.341 800.0 98085.0 25 0 13450.0 + 24886 MPNKVRKI 8 88 493.3023596105135 984.5901662878272 2 493.3029662966728 MULTI CID FTMS 0 0 0 4247 96150.7109375 0.5332079722736678 -11 0.2241420745849609 2 Unmodified _MPNKVRKI_ ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR 36.04419817259434 0.3004715606373109 4 MPNKV 5 3 62.933 0.0 0.0 6.3918 0.0 0.0 0.0 412.2689303033813 412.2689303033813 44.97425010840047 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.0 0.4247425010840047 + MPNKV 6.3918 + + 55 + 1 3.03 63561.4 0.4399999976158142 676 3571 4247 HBL1_DMSO_200M_050219_2,4249 HBL1_DMSO_200M_050219_2,4249,MPNKVRKI False True MPNKVRKI 20.3406 493.302966296673 8905100.875 4247.0 ENSG00000160710|ENST00000368474|ADAR;;nc|ENSG00000160710|P55265-5|ADAR;;nc|ENSG00000160710|P55265-4|ADAR;;nc|ENSG00000160710|P55265-2|ADAR 5.008128643035889 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4251 20.345 27.0 1301500.0 25 0 181230.0 + + -1 TFQQNASSM 9 68 515.7105602067862 1029.4065674803724 2 515.7112304568291 MULTI CID FTMS 0 0 0 4250 2164703.75 0.9190357719417978 1 -0.0047340393066406 1 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))FHFVSSM(Oxidation (M))_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 14.581692164780916 0.6954967302934248 4 SS{M(Oxidation (M))|F} 3 -1 27.549 0.0 0.0 2.6762 0.0 0.0 690.296564894238 0.0 690.296564894238 0.0 16.32068444291761 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 SS{M(Oxidation (M))|F} 2.6762 + + 54 + 1 3.018 34086.3 1.0 677 3572 4250 HBL1_DMSO_200M_050219_2,4251 HBL1_DMSO_200M_050219_2,4251,CFHFVSSM False False TFQQNASSM 20.345433 515.711230456829 0.0 4250.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 0.6979490915934244 2.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 4254 20.361 527.0 136060.0 25 0 26359.0 + 36238 SYAGGRGSY 9 98 459.2096931294596 916.4048333257192 2 459.2094299197197 MULTI CID FTMS 0 0 0 4253 162799.21875 0.7925219077543337 5 -0.0788631439208984 1 Unmodified _SYAGGRGSY_ ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK 17.11289562659939 0.3734572693229295 4 GA[MT] 4 8 20.49 0.0 0.0 2.2359 0.0 0.0 538.2460194318375 0.0 538.2460194318375 0.0 8.706897893556 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 GA[MT] 2.2359 - 47 1 3.018 60587.5 1.0 678 3574 4253 HBL1_DMSO_200M_050219_2,4254 HBL1_DMSO_200M_050219_2,4254,SYAGGRGSY False True SYAGGRGSY 20.3611 459.20942991972 2542548.75 4253.0 nc|ENSG00000165119|P61978-3|HNRNPK;;ENSG00000165119|ENST00000376263|HNRNPK;;nc|ENSG00000165119|P61978|HNRNPK 5.221213022867839 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4255 20.375 800.0 104310.0 25 0 16162.0 13050 HAVTQACSM 9 118 474.2073927467689 946.4002325603376 2 474.2074767947197 MULTI CID FTMS 0 0 0 4253 94015.375 0.865283910443668 -1 0.0039482116699218 2 Unmodified _HAVTQACSM_ ENSG00000115596|ENST00000233948|WNT6 11.640296217721598 0.521594087909532 4 [HA]AQVT 6 6 38.918 0.0 0.0 4.1122 0.0 0.0 0.0 336.0712890391065 336.0712890391065 24.938419519471395 0.0 0.0 0.0 0 0.5 1.154901959985743 0.5 0.0 [HA]AQVT 4.1122 - 104 1 3.018 69046.1 0.5299999713897705 679 3574 4253 HBL1_DMSO_200M_050219_2,4255 HBL1_DMSO_200M_050219_2,4255,HAVTQACSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4258 20.384 162.0 298490.0 25 0 24139.0 + -1 RCCWQCRLWWS 11 70 820.8553649082523 1639.6961768833046 2 820.8556396365166 MULTI CID FTMS 0 0 0 4257 365894.1875 0.9224279412626674 1 -0.0357494354248046 1 2 Carbamidomethyl (C) _RC(Carbamidomethyl (C))C(Carbamidomethyl (C))WQCRLWWS_ REV__ENST00000298292.12_1_14:50100549-50100927:-|nuORF 0.3070304955306653 0.8736993455979228 4 {[CP]|[EA]}PEQ[QA][EP]AEQGQE 15 -1 + 81.255 0.0 0.0 4.9555 4.9555 69.13 0.0 0.0 0.0 0.8218738261901137 0.8218738261901137 0.8218738261901137 0.8218738261901137 0 2.06295299324845 0.0 0.8494850021680094 1.1549471895720984 {[CP]|[EA]}PEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GKEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;[EP]AEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GKEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GKE[WE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;{[CP]|[EA]}PPNS{[SA]|[TG]}[EP]AEQGQE;[EP]APNS{[SA]|[TG]}[EP]AEQGQE 4.9555;4.9054;4.9054;4.8793;4.6219;4.6219;4.4987;4.4987;4.4155;4.3393 -;-;-;-;-;-;-;-;-;- 2211 1 3.018 40421.2 1.0 680 3576 4257 HBL1_DMSO_200M_050219_2,4258 HBL1_DMSO_200M_050219_2,4258,RCCWQCRLWWS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4259 20.39 323.0 382960.0 25 0 36693.0 + 39324 VAEPGQRKI 9 106 333.1985412249565 996.5737942750696 3 333.1986266970634 MULTI CID FTMS 0 0 0 4257 211697.078125 0.1714361197283627 -21 0.3099803924560547 2 Unmodified _VAEPGQRKI_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 21.74664581756881 0.2544899275067181 4 [W{I|L}]PGQ 5 6 21.254 0.0 0.0 2.1328 0.0 0.0 0.0 412.271519977184 412.271519977184 0.8315022276561024 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [W{I|L}]PGQ 2.1328 - 81 + 1 3.018 102590.4 1.0 681 3576 4257 HBL1_DMSO_200M_050219_2,4259 HBL1_DMSO_200M_050219_2,4259,VAEPGQRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4260 20.401 593.0 310820.0 25 0 17638.0 + 37192 TIFLETLE 8 193 322.5105600835572 964.5098508508715 3 322.5103027224541 MULTI CID FTMS 0 0 0 4257 139952.234375 0.3062354753473574 -17 0.2851123809814453 3 Unmodified _TIFLETLE_ REV__ENSG00000188994|ENST00000369577|ZNF292;REV__nc|ENSG00000188994|O60281-2|ZNF292 30.22481116460888 0.4082965392918993 4 T{I|L}HHDET 7 -1 44.233 0.0 0.0 4.5861 0.0 0.0 0.0 128.07196985416252 128.07196985416252 23.33048746302122 0.0 0.0 0.0 0 1.1633465665802327 1.2218487496163564 1.1923877696554317 0.0 T{I|L}HHDET 4.5861 - 219 + 1 3.018 147643.0 1.0 682 3576 4257 HBL1_DMSO_200M_050219_2,4260 HBL1_DMSO_200M_050219_2,4260,TIFLETLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4261 20.414 800.0 117140.0 25 0 9840.5 + 39326 VAEPGQRKI 9 103 499.2933125140629 996.5720720949256 2 499.2933227419853 MULTI CID FTMS 0 0 0 4257 100724.7265625 0.281397658435466 -17 0.2851123809814453 4 Unmodified _VAEPGQRKI_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 30.63653989081413 0.1413794767160703 4 VAEP 4 5 56.146 0.0 0.0 5.634 0.0 0.0 0.0 597.3452242486936 597.3452242486936 24.90417829939986 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.5 0.0 + VAEP 5.634 + + 134 + 1 3.018 73091.3 0.550000011920929 683 3576 4257 HBL1_DMSO_200M_050219_2,4261 HBL1_DMSO_200M_050219_2,4261,VAEPGQRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4263 20.42 153.0 489760.0 25 0 80441.0 -1 EKKLQNTMK 9 77 568.3102598209341 1134.605966708668 2 568.3108398318291 MULTI CID FTMS 0 0 0 4262 526514.3125 0.91706322621998 -7 0.1157913208007812 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 4 KT[YK]RT{M(Oxidation (M))|F}K 8 -1 46.944 0.0 0.0 4.1375 0.0 0.0 63.99646837485586 0.0 63.99646837485586 0.0 33.23246094810262 0.0 0.0 0 0.9247425010840048 0.0 1.3494850021680094 0.25 KT[YK]RT{M(Oxidation (M))|F}K 4.1375 - 235 + 1 3.018 62178.7 1.0 684 3577 4262 HBL1_DMSO_200M_050219_2,4263 HBL1_DMSO_200M_050219_2,4263,EKKLQNTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4264 20.423 148.0 381220.0 25 0 42428.0 + 24727 MPDDHARKI 9 71 541.7739573338683 1081.5333617345366 2 541.7742797732353 MULTI CID FTMS 0 0 0 4262 334443.75 0.5997193218086865 3 -0.0176944732666015 2 Unmodified _MPDDHARKI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 51.629811660486645 0.0367964933207742 4 MPDDHAR[K{I|L}] 9 0 + 80.385 0.0 0.0 7.4325 7.4325 96.29 0.0 0.0 0.0 68.39570963353275 4.137342758552691 4.137342758552691 80.38540967689293 0 1.055462187404089 2.0 0.4247425010840047 0.0 + + MPDDHAR[K{I|L}] 7.4325 + + 67 + 1 3.018 49746.9 1.0 685 3577 4262 HBL1_DMSO_200M_050219_2,4264 HBL1_DMSO_200M_050219_2,4264,MPDDHARKI True True MPDDHARKI 20.422912 541.774279773235 83990444.0 4262.0 nc|ENSG00000052841|Q96AE7-2|TTC17;;ENSG00000052841|ENST00000039989|TTC17 10.545729160308838 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4265 20.424 47.0 1396500.0 25 0 151830.0 + 24887 MPNKVRKI 8 78 329.20424953445144 984.5909192035544 3 329.2039672732353 MULTI CID FTMS 0 0 0 4262 1043196.375 0.8776491465038512 -7 0.1157913208007812 3 Unmodified _MPNKVRKI_ ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR 23.1484247019978 0.5573009939494978 4 MPNKV 5 3 45.459 0.0 0.0 4.617 0.0 0.0 0.0 412.26789270572505 412.26789270572505 35.1812135341916 0.0 0.0 0.0 0 0.0 0.0 0.0 0.75 + MPNKV 4.617 + + 40 + 1 3.018 57632.2 1.0 686 3577 4262 HBL1_DMSO_200M_050219_2,4265 HBL1_DMSO_200M_050219_2,4265,MPNKVRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4272 20.46 800.0 161880.0 25 0 42334.0 + 37462 TLELEFTI 8 107 483.2617685658403 964.5089841984808 2 483.2611266970634 MULTI CID FTMS 0 0 0 4271 86292.5859375 0.5013671399100816 -11 0.10333251953125 1 Unmodified _TLELEFTI_ REV__ENSG00000169220|ENST00000408923|RGS14;REV__ENST00000425155.6_1_5:176795054-176799073:+|nuORF;REV__nc|ENSG00000169220|O43566-5|RGS14;REV__nc|ENSG00000169220|O43566-6|RGS14 30.22481116460888 0.4082965392918993 4 [{I|L}T]H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HT{I|L} 8 -1 + 52.981 0.0 0.0 5.4931 5.4931 86.516 0.0 0.0 0.0 13.609696043945334 31.766449332505147 13.609696043945334 15.127881306118454 0 0.7059771852360797 1.5228787452803376 1.1307196863200843 0.0 [{I|L}T]H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HT{I|L};{I|L}QQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]}T{I|L};{I|L}QQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HVP;{I|L}HTY[YR]{I|L} 5.4931;3.9246;1.4524;1.437 -;-;-;- 283 1 3.013 106576.4 0.6100000143051147 687 3583 4271 HBL1_DMSO_200M_050219_2,4272 HBL1_DMSO_200M_050219_2,4272,TLELEFTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4275 20.469 139.0 623660.0 25 0 96769.0 + 44743 YPLELSSPK 9 73 345.1898524230684 1032.5477278694052 3 345.1894714236259 MULTI CID FTMS 0 0 0 4274 335360.0 0.4183995819871781 45 -0.6008396148681641 1 Unmodified _YPLELSSPK_ REV__ENSG00000075568|ENST00000186436|TMEM131 12.174745833636583 0.5071271664557081 4 YP{I|L}NQ 5 -1 47.053 0.0 0.0 4.5569 0.0 0.0 0.0 414.1983736627563 414.1983736627563 35.81546893236258 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.75 YP{I|L}NQ 4.5569 - 84 + 1 3.013 73346.3 1.0 688 3585 4274 HBL1_DMSO_200M_050219_2,4275 HBL1_DMSO_200M_050219_2,4275,YPLELSSPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4276 20.483 800.0 95215.0 25 0 10345.0 7459 EGPKETPSSAN 11 93 558.7619896587796 1115.5094263843591 2 558.7626830935478 MULTI CID FTMS 0 0 0 4274 106464.21875 0.3426600097743226 -13 0.1233940124511718 2 Unmodified _EGPKETPSSAN_ ENSG00000151929|ENST00000369085|BAG3 26.020703789607367 0.4812285719068541 4 {[DA]|[EG]}[{I|L}V]DPSQSAN 11 5 + 83.524 0.0 0.0 7.4875 7.4875 91.647 0.0 0.0 0.0 7.958578605927713 62.0974673084213 7.958578605927713 9.35759103745312 0 1.3494850021680094 1.0969100130080565 1.2302046884880935 0.3807196863200844 {[DA]|[EG]}[{I|L}V]DPSQSAN;[VG]{[QN]|[E{I|L}]|[KN]}DPSQSAN;{[DA]|[EG]}[{I|L}V]DPS[AG]SAN;[VG]{[QN]|[E{I|L}]|[KN]}DPS[AG]SAN;{[DA]|[EG]}[{I|L}V]D{[{M(Oxidation (M))|F}H]|[RQ]}WN;[VG]{[QN]|[E{I|L}]|[KN]}D{[{M(Oxidation (M))|F}H]|[RQ]}WN 7.4875;6.6487;6.3279;5.8303;3.3109;2.4721 -;-;-;-;-;- 205 1 3.013 62943.5 0.5799999833106995 689 3585 4274 HBL1_DMSO_200M_050219_2,4276 HBL1_DMSO_200M_050219_2,4276,EGPKETPSSAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4279 20.492 46.0 1592600.0 25 0 251090.0 + -1 RTLGLEAMK 9 72 517.7863188643565 1033.558084795513 2 517.7868530154228 MULTI CID FTMS 0 0 0 4278 1460943.75 0.5537370159589287 -2 0.0230159759521484 1 Oxidation (M) _RTLGLEAM(Oxidation (M))K_ REV__ENSG00000148331|ENST00000277458|ASB6;REV__nc|ENSG00000148331|Q9NWX5-2|ASB6 19.256988751693697 0.3154191944385105 4 [KT]T[{I|L}P]AETK 9 -1 43.835 0.0 0.0 4.2411 0.0 0.0 0.0 60.97366716674449 60.97366716674449 25.647124887093824 0.0 0.0 0.0 0 0.5 0.0 1.3494850021680094 0.4247425010840047 [KT]T[{I|L}P]AETK 4.2411 - 161 1 3.013 62525.6 1.0 690 3587 4278 HBL1_DMSO_200M_050219_2,4279 HBL1_DMSO_200M_050219_2,4279,RTLGLEAMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4280 20.502 554.0 69837.0 25 0 5489.5 -1 0 36 628.784965870225 2511.1107576145 4 628.7855712771416 MULTI CID FTMS 0 0 0 4278 34861.01953125 0.3360492012467725 13 -0.2072696685791015 2 4 N 1 -1 15.485 0.0 0.0 0.61664 0.0 0.0 1667.7456585615514 726.3151732817424 2394.0608318432937 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3494850021680094 N 0.61664 - 4 + 1 3.013 37946.8 1.0 691 3587 4278 HBL1_DMSO_200M_050219_2,4280 HBL1_DMSO_200M_050219_2,4280, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4283 20.522 800.0 39157.0 25 0 11456.0 -1 0 24 1125.1120229401067 3372.3142394205206 3 1125.783251941204 MULTI CID FTMS 0 0 0 4282 84163.0234375 0.8070309875108297 1 -0.016336441040039 1 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 3.013 37026.8 0.4099999964237213 692 3589 4282 HBL1_DMSO_200M_050219_2,4283 HBL1_DMSO_200M_050219_2,4283, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4285 20.538 800.0 115130.0 25 0 13499.0 + 8077 EPCGTGLDIQG 11 92 545.2495509410867 1088.4845489489733 2 545.2499877810478 MULTI CID FTMS 0 0 0 4284 68385.2578125 0.3901638281810787 6 -0.0809593200683593 1 Unmodified _EPCGTGLDIQG_ REV__ENST00000284486.8_1_8:11302061-11302304:-|nuORF 12.240655878213236 0.7805268987462184 4 VP 2 -1 31.422 0.0 0.0 2.8868 0.0 0.0 0.0 889.3386934869749 889.3386934869749 10.224254411176016 0.0 0.0 0.0 0 0.3252574989159953 0.958607314841775 0.0 0.0 VP 2.8868 - 38 + 1 3.013 79641.2 0.449999988079071 693 3590 4284 HBL1_DMSO_200M_050219_2,4285 HBL1_DMSO_200M_050219_2,4285,EPCGTGLDIQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4289 20.562 800.0 141410.0 25 0 28790.0 + 39836 VFAVSTTPGRT 11 117 379.2092984562514 0 379.2093994021416 PEAK CID FTMS 0 0 0 4288 46319.53515625 0.4221777488583421 -8 0.0819759368896484 1 Unmodified _VFAVSTTPGRT_ REV__ENST00000423358.2_1_13:41567164-41567443:-|nuORF 9.243775137331635 0.4572465881726245 4 GT 2 -1 11.81 0.0 0.0 1.5614 0.0 0.0 270.14895245189945 325.16303430728755 595.311986759187 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 GT 1.5614 - 27 + 1 3.013 93733.7 0.550000011920929 694 3593 4288 HBL1_DMSO_200M_050219_2,4289 HBL1_DMSO_200M_050219_2,4289,VFAVSTTPGRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4290 20.576 800.0 103400.0 25 0 11812.0 + 26726 NYYEGPHTSH 10 101 602.7543928370031 1203.4942327408062 2 602.7547485232353 MULTI CID FTMS 0 0 0 4288 86478.359375 0.0936177229949985 -21 0.2053699493408203 2 Unmodified _NYYEGPHTSH_ chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2;nc|ENSG00000101888|Q9NPJ8-3|NXT2 81.89019881105858 0.0155187237978306 4 [YN]YEGPHTSH 10 0 + 80.914 0.0 0.0 6.7233 6.7233 91.7 0.0 0.0 0.0 53.45265796384012 14.146518864155126 14.146518864155126 17.743500300354142 0 0.9247425010840048 2.0 1.5114393726401687 0.0 + + [YN]YEGPHTSH;[YN]YP{[DA]|[EG]}HTSH;[YN]Y{M(Oxidation (M))|F}WSTSH;{[QN]|[E{I|L}]|[KN]}THPGEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}GHTSH;[YN]YEPPY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]{[QN]|[E{I|L}]|[KN]}DEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};YY[PG]PGEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YE]{[RE]|[WV]}GEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};YYNEPPY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 6.7233;5.2489;5.0836;4.3577;4.3009;4.2241;3.8166;3.5395;3.5171;3.346 +;-;-;-;-;-;-;-;-;- + 1423 + 1 3.013 62191.7 0.550000011920929 695 3593 4288 HBL1_DMSO_200M_050219_2,4290 HBL1_DMSO_200M_050219_2,4290,NYYEGPHTSH True True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 4292 20.581 22.0 1581800.0 25 0 244630.0 + -1 KEDSVLMMV 9 54 534.2588675606964 1066.5031821881928 2 534.2590209841728 MULTI CID FTMS 0 0 0 4291 2680384.5 0.6982624161350506 24 -0.342477798461914 1 Oxidation (M) _KEDSVLM(Oxidation (M))MV_ REV__ENSG00000183690|ENST00000420999|EFHC2 6.723162845929126 0.6799819581413107 4 SHV{[QG]|[NA]} 5 -1 21.198 0.0 0.0 1.9876 0.0 0.0 540.2575550763687 0.0 540.2575550763687 0.0 8.098943791441968 0.0 0.0 0 0.5 0.0 0.0 0.0 SHV{[QG]|[NA]} 1.9876 - 43 1 3.013 34321.5 1.0 696 3594 4291 HBL1_DMSO_200M_050219_2,4292 HBL1_DMSO_200M_050219_2,4292,KEDSVLMMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4293 20.584 121.0 664620.0 25 0 58648.0 + 26729 NYYEGPHTSH 10 91 402.172190222018 1203.494741266254 3 402.1722595095634 MULTI CID FTMS 0 0 0 4291 368672.40625 0.1346398329457324 -19 0.2011699676513672 2 Unmodified _NYYEGPHTSH_ chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2;nc|ENSG00000101888|Q9NPJ8-3|NXT2 58.6788170122104 0.0400518768368984 4 [YN]YEGPHTSH 10 0 + 78.521 0.0 0.0 6.5244 6.5244 92.325 0.0 0.0 0.0 63.35844055138702 15.026975159433531 15.026975159433531 33.058356021749034 0 0.0 2.0 1.4698565171985376 0.0 + + [YN]YEGPHTSH;[YN]YEG{[HG]|PP}{NN|[MP]|[D{I|L}]|[EV]}H;[YN]YE[HN]{NN|[MP]|[D{I|L}]|[EV]}H;[YN]YW{[HG]|PP}{NN|[MP]|[D{I|L}]|[EV]}H;{[QN]|[E{I|L}]|[KN]}T{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 6.5244;3.7776;3.2348;2.9184;0.95101 +;-;-;-;- + 312 + 1 3.013 68340.5 1.0 697 3594 4291 HBL1_DMSO_200M_050219_2,4293 HBL1_DMSO_200M_050219_2,4293,NYYEGPHTSH True True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 4294 20.598 800.0 78441.0 25 0 5755.0 + 45029 YPVQGQINT 9 106 510.26138132973233 0 510.2614623904228 PEAK CID FTMS 0 0 0 4291 91898.234375 0.8210583111135928 -7 0.0889873504638671 3 Unmodified _YPVQGQINT_ REV__ENSG00000087303|ENST00000216286|NID2;REV__ENST00000554284.1_1_14:52495365-52507549:-|nuORF;REV__nc|ENSG00000087303|Q14112-2|NID2 13.90604991867851 0.2674652324371145 4 PV 2 -1 12.831 0.0 0.0 1.2598 0.0 0.0 163.0620400998278 656.3031710260374 819.3652111258652 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PV 1.2598 + + 65 + 1 3.013 55668.1 0.449999988079071 698 3594 4291 HBL1_DMSO_200M_050219_2,4294 HBL1_DMSO_200M_050219_2,4294,YPVQGQINT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4296 20.603 74.0 605890.0 25 0 72636.0 + 24725 MPDDHARKI 9 70 361.5185911841719 1081.5339441527158 3 361.5185119509697 MULTI CID FTMS 0 0 0 4295 558048.75 0.1516606099444387 21 -0.2988243103027344 1 Unmodified _MPDDHARKI_ ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17 20.41453444215458 0.284085796332423 4 MPDDHAR[K{I|L}] 9 0 + 46.309 0.0 0.0 4.2818 4.2818 83.239 0.0 0.0 0.0 26.01850649356642 0.915149811213496 0.915149811213496 31.480625354554373 0 0.0 0.0 0.4247425010840047 0.0 + + MPDDHAR[K{I|L}];MPD[WH][VG][K{I|L}] 4.2818;1.371 +;- + 69 + 1 2.997 44587.5 1.0 699 3595 4295 HBL1_DMSO_200M_050219_2,4296 HBL1_DMSO_200M_050219_2,4296,MPDDHARKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4299 20.623 800.0 151260.0 25 0 13924.0 + 3972 DALQKQREV 9 106 543.7986977380976 1085.5828425429952 2 543.7993041872978 MULTI CID FTMS 0 0 0 4298 174250.40625 0.0613227133257816 -11 0.1234626770019531 1 Unmodified _DALQKQREV_ ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A 63.22749603027936 0.0242951379232427 4 DA{I|L}QKQ{[RE]|[WV]}V 9 0 + 95.738 0.0 0.0 8.819 8.819 93.1 0.0 0.0 0.0 78.30262591534354 14.23458199382101 14.23458199382101 9.208187539523747 0 1.6421590589602533 1.6989700043360187 1.110924374808178 0.7742275032520141 + + DA{I|L}QKQ{[RE]|[WV]}V;DA{I|L}[AG]KQ{[RE]|[WV]}V;DA{I|L}QK[AG]{[RE]|[WV]}V;VEAQKQ{[RE]|[WV]}V;{NN|[MP]|[D{I|L}]|[EV]}RQ[VG]T[QA]V;{NN|[MP]|[D{I|L}]|[EV]}RQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QA]V;{NN|[MP]|[D{I|L}]|[EV]}R{[RE]|[WV]}V{[CP]|[EA]}V 8.819;7.9708;7.9708;5.5395;0.29155;0.12934;0.015382 +;-;-;-;-;-;- + 536 + 1 2.997 94891.4 0.6600000262260437 700 3597 4298 HBL1_DMSO_200M_050219_2,4299 HBL1_DMSO_200M_050219_2,4299,DALQKQREV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4300 20.637 800.0 116290.0 25 0 5411.6 25181 MSPGEDWVAN 10 134 553.2329125313975 1104.4512721295948 2 553.2337524294853 MULTI CID FTMS 0 0 0 4298 115843.4453125 0.6331590106091562 31 -0.4376468658447265 2 Unmodified _MSPGEDWVAN_ ENST00000590740.2_2_17:41322312-41322399:-|nuORF 6.723162845929126 0.6955379296933136 4 V{[QG]|[NA]} 3 7 15.458 0.0 0.0 1.3996 0.0 0.0 802.3030137832054 0.0 802.3030137832054 0.0 3.3884983475163573 0.0 0.0 0 0.5 0.0 0.0 0.0 + V{[QG]|[NA]} 1.3996 + + 200 1 2.997 78378.6 0.6100000143051147 701 3597 4298 HBL1_DMSO_200M_050219_2,4300 HBL1_DMSO_200M_050219_2,4300,MSPGEDWVAN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4302 20.653 800.0 102720.0 25 0 7074.8 + 31483 RPWYWEWCTWQ 11 86 820.8553649082523 1639.6961768833046 2 821.3573486208916 MULTI CID FTMS 0 0 0 4301 163240.890625 0.4968141819831848 26 -0.3180179595947265 1 Unmodified _RPWYWEWCTWQ_ REV__ENST00000409198.5_2_2:152506865-152507290:-|nuORF 0.2690200627634905 0.8738786812967896 4 [EP]AEQ[QA][EP]AEQGQE 15 -1 + 88.806 0.0 0.0 5.416 5.416 74.493 0.0 0.0 0.0 2.741049764686153 2.741049764686153 2.741049764686153 2.741049764686153 0 2.057902146726378 0.8538719643217619 2.0356668758921828 0.0 [EP]AEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGGAE;[EP]AEQY[YV]AEQGQE;[EP]APNS{[SA]|[TG]}[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]Q{M(Oxidation (M))|F}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGQE;{[CP]|[EA]}PEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]Q{M(Oxidation (M))|F}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA[YV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QNAE 5.416;5.2488;5.0619;5.0236;5.011;4.8422;4.7317;4.7117;4.6539;4.6137 -;-;-;-;-;-;-;-;-;- 3563 1 2.997 64338.3 0.550000011920929 702 3598 4301 HBL1_DMSO_200M_050219_2,4302 HBL1_DMSO_200M_050219_2,4302,RPWYWEWCTWQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4303 20.656 167.0 488600.0 25 0 43089.0 + 3975 DALQKQREV 9 102 362.8683726822079 1085.5832886468238 3 362.8679382205009 MULTI CID FTMS 0 0 0 4301 367878.96875 0.1433489135311926 -14 0.17633056640625 2 Unmodified _DALQKQREV_ ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A 41.95555342248728 0.0647214845423414 4 DA{I|L}QKQ{[RE]|[WV]}V 9 0 + 80.366 0.0 0.0 7.403 7.403 90.524 0.0 0.0 0.0 69.76996655288828 7.229810748439263 7.229810748439263 9.208187539523747 0 0.4247425010840047 2.0 0.805462187404089 0.9247425010840048 + + DA{I|L}QKQ{[RE]|[WV]}V;DA{I|L}QK[AG]{[RE]|[WV]}V;DA{I|L}[AG]KQ{[RE]|[WV]}V;DAVAAKQ{[RE]|[WV]}V 7.403;6.5548;6.5548;5.8169 +;-;-;- + 147 + 1 2.997 70604.6 1.0 703 3598 4301 HBL1_DMSO_200M_050219_2,4303 HBL1_DMSO_200M_050219_2,4303,DALQKQREV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4305 20.661 69.0 1148900.0 25 0 130080.0 + 39325 VAEPGQRKI 9 86 333.1985412249565 996.5737942750696 3 333.1983520388603 MULTI CID FTMS 0 0 0 4304 773492.6875 0.6263883571645921 2 -0.044778823852539 1 Unmodified _VAEPGQRKI_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 16.942295170755138 0.3780752226737986 4 [W{I|L}]PG 4 7 10.802 0.0 0.0 1.0839 0.0 0.0 0.0 540.3263643854124 540.3263643854124 -3.0546218740408904 0.0 -3.0546218740408904 0.0 0 0.0 0.0 0.0 0.0 [W{I|L}]PG 1.0839 - 40 + 1 2.997 71382.0 1.0 704 3599 4304 HBL1_DMSO_200M_050219_2,4305 HBL1_DMSO_200M_050219_2,4305,VAEPGQRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4306 20.675 800.0 170300.0 25 0 13012.0 + 39327 VAEPGQRKI 9 114 499.2933125140629 996.5720720949256 2 499.2931091189384 MULTI CID FTMS 0 0 0 4304 193604.078125 0.5408774598571601 6 -0.11480712890625 2 Unmodified _VAEPGQRKI_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 47.74868867922204 0.0453060283459952 4 VAEPGQRK{I|L} 9 0 + 67.608 0.0 0.0 6.784 6.784 88.103 0.0 0.0 0.0 56.34857621580276 3.487219860018556 3.487219860018556 9.208187539523742 0 1.1803115997617928 1.6989700043360187 0.5 0.3494850021680094 + + VAEPGQRK{I|L};VAEPG[AG]RK{I|L};K[NG]PGQ[VG]K{I|L};VA[WP]Q[VG]K{I|L};K[NG]{I|L}[KG]QVGP;KP[NG]GQ[VG]K{I|L};[W{I|L}]PG[AG][VG]K{I|L};K{[MG]|[TS]}HQ[VG]K{I|L} 6.784;5.86;2.4986;2.271;1.8811;1.7703;0.59278;0.38661 +;-;-;-;-;-;-;- + 420 + 1 2.997 106368.8 0.8700000047683716 705 3599 4304 HBL1_DMSO_200M_050219_2,4306 HBL1_DMSO_200M_050219_2,4306,VAEPGQRKI True True VAEPGQRKI 20.674632 499.293109118938 8449423.0 4304.0 nc|ENSG00000134644|Q14671|PUM1;;nc|ENSG00000134644|Q14671-4|PUM1;;nc|ENSG00000134644|Q14671-2|PUM1;;ENSG00000134644|ENST00000426105|PUM1 4.758392175038655 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4307 20.684 528.0 93939.0 25 0 10522.0 + -1 ATMWEMVT 8 76 500.7072711174718 999.3999893017436 2 500.7075683474541 MULTI CID FTMS 0 0 0 4304 185959.5625 1.0 0 0.0 3 2 Oxidation (M) _ATM(Oxidation (M))WEM(Oxidation (M))VT_ REV__ENST00000369764.1_1_10:105664890-105670305:-|nuORF 9.347437153973935 0.7675937258251505 4 S{I|L} 2 -1 21.211 0.0 0.0 2.1224 0.0 0.0 781.2728816130702 0.0 781.2728816130702 0.0 -4.730749808046326 -4.730749808046326 0.0 0 0.0 0.0 0.3252574989159953 0.0 S{I|L} 2.1224 - 30 + 1 2.997 44126.6 1.0 706 3599 4304 HBL1_DMSO_200M_050219_2,4307 HBL1_DMSO_200M_050219_2,4307,ATMWEMVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4308 20.694 604.0 92743.0 25 0 10323.0 + 28752 PWAASASV 8 118 394.6988784618716 787.3832039905432 2 394.6988098025322 MULTI CID FTMS 0 0 0 4304 123493.9765625 0.9825950115579272 -3 0.0532398223876953 4 Unmodified _PWAASASV_ REV__ENST00000586922.2_1_18:32864420-32870144:-|nuORF 34.18733598223924 0.3315367612694167 4 CSSV 4 -1 45.235 0.0 0.0 5.745 0.0 0.0 393.2425200495791 0.0 393.2425200495791 0.0 29.66190326687972 0.0 0.0 0 1.305462187404089 0.0 0.6747425010840047 0.0 CSSV 5.745 - 131 1 2.997 46591.5 1.0 707 3599 4304 HBL1_DMSO_200M_050219_2,4308 HBL1_DMSO_200M_050219_2,4308,PWAASASV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4310 20.701 141.0 464420.0 25 0 68712.0 -1 EKKLQNTMK 9 73 568.3102598209341 1134.605966708668 2 568.3107787966728 MULTI CID FTMS 0 0 0 4309 497121.46875 0.8658678541717514 16 -0.2019157409667968 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 4 T{M(Oxidation (M))|F}K 3 -1 39.922 0.0 0.0 3.5185 0.0 0.0 740.4185884978324 0.0 740.4185884978324 0.0 26.2101498947667 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.5185 + + 52 1 2.976 54540.9 1.0 708 3600 4309 HBL1_DMSO_200M_050219_2,4310 HBL1_DMSO_200M_050219_2,4310,EKKLQNTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4312 20.717 800.0 89735.0 25 0 9617.1 16018 ITFELELT 8 101 483.2617685658403 964.5089841984808 2 483.2620117068291 MULTI CID FTMS 0 0 0 4311 42008.11328125 0.2440706507983599 7 -0.1076869964599609 1 Unmodified _ITFELELT_ ENSG00000169220|ENST00000408923|RGS14;ENST00000425155.6_1_5:176795054-176799073:+|nuORF;nc|ENSG00000169220|O43566-5|RGS14;nc|ENSG00000169220|O43566-6|RGS14 19.438996006549623 0.6237395211498085 4 {I|L}HT{I|L} 4 6 38.499 0.0 0.0 3.9915 0.0 0.0 482.2145252912125 0.0 482.2145252912125 0.0 26.71584755181917 0.0 0.0 0 0.8945990182825423 0.0 0.0 0.0 {I|L}HT{I|L} 3.9915 - 86 1 2.976 61055.8 0.4399999976158142 709 3601 4311 HBL1_DMSO_200M_050219_2,4312 HBL1_DMSO_200M_050219_2,4312,ITFELELT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4313 20.728 637.0 139070.0 25 0 10600.0 + 38134 TPMGPGRTV 9 114 466.2361133081448 930.4576736830896 2 466.2369262576103 MULTI CID FTMS 0 0 0 4311 148964.75 0.501619653074447 -20 0.2648773193359375 2 Oxidation (M) _TPM(Oxidation (M))GPGRTV_ ENSG00000116977|ENST00000366584|LGALS8;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;nc|ENSG00000116977|O00214-2|LGALS8 47.594388314883695 0.0456443387682827 4 TP{M(Oxidation (M))|F}GP 5 4 60.565 0.0 0.0 6.5091 0.0 0.0 0.0 428.2272738092407 428.2272738092407 39.59544243948811 0.0 0.0 0.0 0 1.0387254899964358 2.0 0.0 0.0 + TP{M(Oxidation (M))|F}GP 6.5091 + + 182 + 1 2.976 75312.4 1.0 710 3601 4311 HBL1_DMSO_200M_050219_2,4313 HBL1_DMSO_200M_050219_2,4313,TPMGPGRTV True False TPMGPGRTV 20.728261 466.23692625761 9804376.5 4311.0 ENSG00000116977|ENST00000366584|LGALS8;;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;;nc|ENSG00000116977|O00214-2|LGALS8 9.303552786509195 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4315 20.744 800.0 93809.0 25 0 10079.0 5721 DPLKGEGESAN 11 101 558.7619896587796 1115.5094263843591 2 558.7620727419853 MULTI CID FTMS 0 0 0 4314 145622.96875 0.4686942569166307 4 -0.046701431274414 1 Unmodified _DPLKGEGESAN_ ENSG00000115760|ENST00000421745|BIRC6 40.23920728925047 0.2087110615831976 4 {[DA]|[EG]}[{I|L}V]DPSQSAN 11 6 + 86.763 0.0 0.0 7.7779 7.7779 88.252 0.0 0.0 0.0 6.53212513775344 9.128498242811006 6.53212513775344 6.53212513775344 0 1.5 1.154901959985743 1.774227503252014 0.7302046884880937 {[DA]|[EG]}[{I|L}V]DPSQSAN;[PS][{I|L}T]DPSQSAN;[VG]{[QN]|[E{I|L}]|[KN]}DPSQSAN;{[DA]|[EG]}[{I|L}V]DPS[AG]SAN;[VG]{[QN]|[E{I|L}]|[KN]}DPS[AG]SAN;[PS][{I|L}T]DPS[AG]SAN;{[DA]|[EG]}[{I|L}V]D[VG]QDAN;[PS][{I|L}T]D[VG]QDAN;[VG]{[QN]|[E{I|L}]|[KN]}D[VG]QDAN;[VG]{[QN]|[E{I|L}]|[KN]}DRQWN 7.7779;7.1923;6.6967;6.3049;5.8784;5.7194;4.1907;3.6052;3.1096;2.719 -;-;-;-;-;-;-;-;-;- 373 1 2.976 62473.8 0.6600000262260437 711 3602 4314 HBL1_DMSO_200M_050219_2,4315 HBL1_DMSO_200M_050219_2,4315,DPLKGEGESAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4316 20.752 408.0 318230.0 25 0 38079.0 + 44311 YLNAFRHL 8 110 345.1898524230684 1032.5477278694052 3 345.1895934939384 MULTI CID FTMS 0 0 0 4314 196840.03125 0.2455802325660278 62 -0.933757781982422 2 Unmodified _YLNAFRHL_ REV__nc|ENSG00000118322|O94823-3|ATP10B 10.073929032068715 0.7620901558688216 4 Y{I|L}NP 4 -1 39.993 0.0 0.0 3.8732 0.0 0.0 0.0 542.2704561822874 542.2704561822874 29.535247228595267 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 Y{I|L}NP 3.8732 - 195 + 1 2.976 110169.2 1.0 712 3602 4314 HBL1_DMSO_200M_050219_2,4316 HBL1_DMSO_200M_050219_2,4316,YLNAFRHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4317 20.763 658.0 120060.0 25 0 11541.0 + 3927 DALKHASNM 9 117 493.7398321500649 985.4651113669298 2 493.7390014529228 MULTI CID FTMS 0 0 0 4314 101347.21875 0.5276607701549794 -5 0.121500015258789 3 Unmodified _DALKHASNM_ ENSG00000069329|ENST00000299138|VPS35;ENST00000563400.1_1_16:34324914-34327021:+|nuORF;ENST00000568191.1_1_16:46715982-46717476:-|nuORF;ENST00000568784.6_1_16:46694386-46722246:-|nuORF 40.23920728925047 0.0741434193262949 4 DA{I|L}K 4 5 43.448 0.0 0.0 4.4089 0.0 0.0 0.0 555.2003878229124 555.2003878229124 21.99982483810974 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + DA{I|L}K 4.4089 + + 269 + 1 2.976 64123.9 1.0 713 3602 4314 HBL1_DMSO_200M_050219_2,4317 HBL1_DMSO_200M_050219_2,4317,DALKHASNM True True DALKHASNM 20.763162 493.739001452923 753067.5 4314.0 ENST00000563400.1_1_16:34324914-34327021:+|nuORF;;ENST00000568191.1_1_16:46715982-46717476:-|nuORF;;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 8.056171735127768 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4323 20.795 800.0 97599.0 25 0 9191.8 + 40168 VGPGLGWAASV 11 100 507.2722090575505 1012.5298651819012 2 507.2714721560478 MULTI CID FTMS 0 0 0 4322 62335.2421875 0.1962087251321909 -30 0.3641719818115234 1 Unmodified _VGPGLGWAASV_ REV__ENST00000396465.5_1_8:74204990-74206187:-|nuORF 13.042465956692816 0.7638483625850725 4 GP 2 -1 18.583 0.0 0.0 1.8354 0.0 0.0 253.1419831383053 602.2894991510374 855.4314822893427 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 GP 1.8354 + + 97 + 1 2.954 65279.9 0.6299999952316284 714 3607 4322 HBL1_DMSO_200M_050219_2,4323 HBL1_DMSO_200M_050219_2,4323,VGPGLGWAASV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4324 20.809 800.0 170030.0 25 0 21901.0 + 39310 VAEDRTRVV 9 132 348.8648950160042 1043.572855648213 3 348.8645202517509 MULTI CID FTMS 0 0 0 4322 95990.71875 0.1374834708480005 -17 0.256692886352539 2 Unmodified _VAEDRTRVV_ ENSG00000143641|ENST00000366672|GALNT2;nc|ENSG00000143641|Q10471-2|GALNT2 26.268140514670165 0.1969607489560049 4 VAEDR 5 4 60.675 0.0 0.0 5.8142 0.0 0.0 0.0 470.2724093072876 470.2724093072876 50.07939327576531 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.75 + VAEDR 5.8142 + + 146 + 1 2.954 125216.9 0.5699999928474426 715 3607 4322 HBL1_DMSO_200M_050219_2,4324 HBL1_DMSO_200M_050219_2,4324,VAEDRTRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4326 20.825 800.0 140740.0 25 0 27972.0 + 39837 VFAVSTTPGRT 11 121 379.2092984562514 0 379.2096130251884 PEAK CID FTMS 0 0 0 4325 84945.3125 0.7742310169207182 7 -0.0714912414550781 1 Unmodified _VFAVSTTPGRT_ REV__ENST00000423358.2_1_13:41567164-41567443:-|nuORF 9.243775137331635 0.4572465881726245 4 ETE 3 -1 15.985 0.0 0.0 2.1133 0.0 0.0 97.09103348867298 297.16868005924067 394.2597135479136 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.7302046884880937 0.0 ETE 2.1133 - 54 + 1 2.954 96047.9 0.3799999952316284 716 3608 4325 HBL1_DMSO_200M_050219_2,4326 HBL1_DMSO_200M_050219_2,4326,VFAVSTTPGRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4327 20.839 800.0 143790.0 25 0 35981.0 + 39312 VAEDRTRVV 9 103 522.792970081935 1043.57138723067 2 522.7933227419853 MULTI CID FTMS 0 0 0 4325 91790.78125 0.2881766161649608 -18 0.2866649627685547 2 Unmodified _VAEDRTRVV_ ENSG00000143641|ENST00000366672|GALNT2;nc|ENSG00000143641|Q10471-2|GALNT2 32.78568957990786 0.1150597335874693 4 VAEDR 5 4 38.188 0.0 0.0 3.6593 0.0 0.0 0.0 470.27277551822505 470.27277551822505 20.28991563746842 0.0 0.0 0.0 0 0.2742275032520141 1.3979400086720375 0.0 0.4247425010840047 + VAEDR 3.6593 + + 598 + 1 2.954 94893.6 0.449999988079071 717 3608 4325 HBL1_DMSO_200M_050219_2,4327 HBL1_DMSO_200M_050219_2,4327,VAEDRTRVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4329 20.843 22.0 2932500.0 25 0 297400.0 + 26730 NYYEGPHTSH 10 81 402.172190222018 1203.494741266254 3 402.1721069216728 MULTI CID FTMS 0 0 0 4328 2484563.5 0.9073671067105104 -4 0.0677070617675781 1 Unmodified _NYYEGPHTSH_ chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2;nc|ENSG00000101888|Q9NPJ8-3|NXT2 41.8396318013385 0.1381409678234242 4 [YN]YEGPHTSH 10 0 + 72.159 0.0 0.0 5.9958 5.9958 91.268 0.0 0.0 0.0 54.1709483080119 15.026975159433531 15.026975159433531 72.15935755130296 0 0.0 2.0 0.8494850021680094 0.0 + + [YN]YEGPHTSH 5.9958 + + 302 + 1 2.954 56681.1 1.0 718 3609 4328 HBL1_DMSO_200M_050219_2,4329 HBL1_DMSO_200M_050219_2,4329,NYYEGPHTSH False True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 4330 20.845 48.0 740220.0 25 0 103480.0 + 33340 SGDLPGQTHGV 11 62 534.2588675606964 1066.5031821881928 2 534.2589599490166 MULTI CID FTMS 0 0 0 4328 1186310.75 0.3090437997167884 39 -0.6672744750976562 2 Unmodified _SGDLPGQTHGV_ REV__ENSG00000079308|ENST00000682258|TNS1;REV__nc|ENSG00000079308|Q9HBL0-1|TNS1 8.745405648335112 0.8338865417133445 4 SSSHV{[QG]|[NA]} 7 -1 42.025 0.0 0.0 3.9405 0.0 0.0 366.1919117658219 0.0 366.1919117658219 0.0 30.242429913696665 0.0 0.0 0 0.5 0.0 0.7059771852360797 0.0 SSSHV{[QG]|[NA]} 3.9405 - 63 1 2.954 34386.0 1.0 719 3609 4328 HBL1_DMSO_200M_050219_2,4330 HBL1_DMSO_200M_050219_2,4330,SGDLPGQTHGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4331 20.846 65.0 651500.0 25 0 86178.0 + 26727 NYYEGPHTSH 10 69 602.7543928370031 1203.4942327408062 2 602.7548095583916 MULTI CID FTMS 0 0 0 4328 895629.25 0.9695694002372288 -5 0.071695327758789 3 Unmodified _NYYEGPHTSH_ chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2;nc|ENSG00000101888|Q9NPJ8-3|NXT2 62.57269311338072 0.0298375429882549 4 [YN]YEGPHTSH 10 0 + 79.346 0.0 0.0 6.593 6.593 92.435 0.0 0.0 0.0 65.36175320500661 14.146518864155126 14.146518864155126 30.96910013008056 0 0.9247425010840048 2.0 0.8494850021680094 0.0 + + [YN]YEGPHTSH;{[QN]|[E{I|L}]|[KN]}THPGEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]YED{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]{[QN]|[E{I|L}]|[KN]}{[CT]|[{M(Oxidation (M))|F}G]}HTSH;{[QN]|[E{I|L}]|[KN]}T[YQ]EY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}THPG[C(Carbamidomethyl (C))N][YN];{[QN]|[E{I|L}]|[KN]}TH{[CT]|[{M(Oxidation (M))|F}G]}SH[YN];{[QN]|[E{I|L}]|[KN]}T[YQ][C(Carbamidomethyl (C))N][YN] 6.593;4.0197;3.6114;3.459;2.8157;1.3038;1.2636;0.099753 +;-;-;-;-;-;-;- + 239 + 1 2.954 34738.5 1.0 720 3609 4328 HBL1_DMSO_200M_050219_2,4331 HBL1_DMSO_200M_050219_2,4331,NYYEGPHTSH True True NYYEGPHTSH 20.846205 602.754809558392 96211167.0 4328.0 nc|ENSG00000101888|Q9NPJ8-3|NXT2;;chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2 11.134392102559408 2.0 True 10.0 False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 4336 20.863 20.0 2492600.0 25 0 248920.0 + 3973 DALQKQREV 9 70 543.7986977380976 1085.5828425429952 2 543.7989990115166 MULTI CID FTMS 0 0 0 4335 2514246.5 0.8848209922027076 5 -0.060760498046875 1 Unmodified _DALQKQREV_ ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A 51.41523569358685 0.0372669606867193 4 DA{I|L}QKQ 6 3 80.935 0.0 0.0 7.4554 0.0 0.0 0.0 399.2006794391325 399.2006794391325 68.94524706148886 0.0 0.0 0.0 0 1.305462187404089 1.5228787452803376 0.0 0.8494850021680094 + DA{I|L}QKQ 7.4554 + + 76 + 1 2.935 42860.5 1.0 721 3613 4335 HBL1_DMSO_200M_050219_2,4336 HBL1_DMSO_200M_050219_2,4336,DALQKQREV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4337 20.876 800.0 71974.0 25 0 5661.4 + 44889 YPPNSQSKV 9 87 510.2610878906211 1018.5076228480424 2 510.2611572146416 MULTI CID FTMS 0 0 0 4335 78684.7578125 0.67854464348755 -25 0.3561763763427734 2 Unmodified _YPPNSQSKV_ ENSG00000072210|ENST00000176643|ALDH3A2;ENST00000472059.5_1_17:19558694-19578882:+|nuORF;ENST00000476965.5_1_17:19559657-19578882:+|nuORF;nc|ENSG00000072210|P51648-2|ALDH3A2 21.53697664764585 0.2571576504437394 4 YPP[WP]YSG 8 5 49.417 0.0 0.0 4.8519 0.0 0.0 0.0 68.05135523013905 68.05135523013905 37.42738247542263 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPP[WP]YSG 4.8519 - 126 + 1 2.935 52874.1 0.5899999737739563 722 3613 4335 HBL1_DMSO_200M_050219_2,4337 HBL1_DMSO_200M_050219_2,4337,YPPNSQSKV False True YPPNSQSKV 20.876328 510.261157214642 15168009.0 4335.0 ENST00000476965.5_1_17:19559657-19578882:+|nuORF;;nc|ENSG00000072210|P51648-2|ALDH3A2;;ENST00000472059.5_1_17:19558694-19578882:+|nuORF;;ENSG00000072210|ENST00000176643|ALDH3A2 4.763876676559448 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4340 20.896 800.0 234340.0 25 0 17133.0 + 38277 TPYYTETVV 9 162 358.17718390295056 1071.5097223090518 3 358.1761657595634 MULTI CID FTMS 0 0 0 4339 104120.2109375 0.3460926503139024 -24 0.3418464660644531 1 Unmodified _TPYYTETVV_ REV__ENSG00000158201|ENST00000289119|ABHD3;REV__ENST00000577928.5_1_18:19263865-19284533:-|nuORF;REV__ENST00000578270.5_1_18:19244077-19283696:-|nuORF;REV__ENST00000579875.5_1_18:19244061-19284599:-|nuORF;REV__ENST00000579982.1_1_18:19282269-19284734:-|nuORF 12.531546534597751 0.4974689918368763 4 YPTEV 5 -1 48.056 0.0 0.0 4.4849 0.0 0.0 0.0 479.2107637994751 479.2107637994751 17.345959572956037 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.4247425010840047 0.0 YPTEV 4.4849 - 207 + 1 2.935 157335.1 0.5600000023841858 723 3615 4339 HBL1_DMSO_200M_050219_2,4340 HBL1_DMSO_200M_050219_2,4340,TPYYTETVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4343 20.905 23.0 2171000.0 25 0 176770.0 + 3976 DALQKQREV 9 78 362.8683726822079 1085.5832886468238 3 362.8681823611259 MULTI CID FTMS 0 0 0 4342 2071061.375 0.8070165004850334 5 -0.0344371795654296 1 Unmodified _DALQKQREV_ ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A 31.26834338654808 0.1333407332142048 4 {[DA]|[EG]}{I|L}QKQ{[RE]|[WV]}V 9 0 + 58.852 0.0 0.0 5.4212 5.4212 83.281 0.0 0.0 0.0 49.01917804874024 2.649087242336776 2.649087242336776 9.208187539523747 0 0.3807196863200844 2.0 0.5 0.8494850021680094 + + {[DA]|[EG]}{I|L}QKQ{[RE]|[WV]}V;{[DA]|[EG]}{I|L}QK[AG]{[RE]|[WV]}V;{[DA]|[EG]}{I|L}[AG]KQ{[RE]|[WV]}V;{[DA]|[EG]}VAAKQ{[RE]|[WV]}V 5.4212;4.573;4.573;3.9502 +;-;-;- + 87 + 1 2.935 43162.0 1.0 724 3617 4342 HBL1_DMSO_200M_050219_2,4343 HBL1_DMSO_200M_050219_2,4343,DALQKQREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4344 20.919 800.0 167520.0 25 0 12516.0 + 13611 HPPPPPRLG 9 93 484.2771229677621 966.5396930023244 2 484.2765380740166 MULTI CID FTMS 0 0 0 4342 85097.34375 0.2073157046548213 -20 0.2934608459472656 2 Unmodified _HPPPPPRLG_ REV__ENSG00000156860|ENST00000356166|FBRS 20.453626601364224 0.2830276176381075 4 HPPPP 5 -1 48.443 0.0 0.0 5.012 0.0 0.0 0.0 438.2496737115844 438.2496737115844 31.096981436199016 0.0 0.0 0.0 0 0.5 1.0 0.0 0.0 HPPPP 5.012 + + 95 + 1 2.935 106487.2 0.6100000143051147 725 3617 4342 HBL1_DMSO_200M_050219_2,4344 HBL1_DMSO_200M_050219_2,4344,HPPPPPRLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4351 20.955 800.0 50362.0 25 0 4358.6 + 1166 AHIEEETFQG 10 76 580.7660836084922 1159.5176142837845 2 580.7668945193291 MULTI CID FTMS 0 0 0 4350 55877.33203125 0.6301374720736173 1 -0.016326904296875 1 Unmodified _AHIEEETFQG_ REV__ENSG00000085831|ENST00000680483|TTC39A;REV__nc|ENSG00000085831|Q5SRH9-3|TTC39A;REV__nc|ENSG00000085831|Q5SRH9-4|TTC39A;REV__nc|ENSG00000085831|Q5SRH9-6|TTC39A;REV__nc|ENSG00000085831|Q5SRH9|TTC39A 5.731851221503515 0.7001233259664787 4 C(Carbamidomethyl (C)) 1 -1 3.9794 0.0 0.0 0.34319 0.0 0.0 862.4450567660093 134.02503381900627 996.4700905850156 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.34319 - 8 + 1 2.922 35895.5 0.5400000214576721 726 3623 4350 HBL1_DMSO_200M_050219_2,4351 HBL1_DMSO_200M_050219_2,4351,AHIEEETFQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4353 20.963 351.0 156890.0 25 0 19153.0 -1 EKKLQNTMK 9 82 568.3102598209341 1134.605966708668 2 568.3108398318291 MULTI CID FTMS 0 0 0 4352 143403.59375 0.2497750948335604 40 -0.7072162628173828 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 17.11289562659939 0.3734572693229295 4 T{M(Oxidation (M))|F}K 3 -1 32.237 0.0 0.0 2.8413 0.0 0.0 740.417656017065 0.0 740.417656017065 0.0 14.356734291156954 0.0 0.0 0 1.0 0.0 0.0 0.2059771852360797 T{M(Oxidation (M))|F}K 2.8413 + + 187 + 1 2.922 47657.0 1.0 727 3624 4352 HBL1_DMSO_200M_050219_2,4353 HBL1_DMSO_200M_050219_2,4353,EKKLQNTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4354 20.973 554.0 149530.0 25 0 65907.0 12509 GVEALGRRD 9 76 486.7646961136749 971.51483929415 2 488.2680541872978 MULTI CID FTMS 0 0 0 4352 111937.859375 0.77369060790784 -16 0.1460952758789062 2 Unmodified _GVEALGRRD_ ENSG00000178397|ENST00000313324|FAM220A 4.75600775471527 0.7486543447549536 4 V 1 8 11.109 0.0 0.0 1.1435 0.0 0.0 854.4355679091874 0.0 854.4355679091874 0.0 4.119543704721593 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1435 + + 17 + 1 2.922 72533.7 1.0 728 3624 4352 HBL1_DMSO_200M_050219_2,4354 HBL1_DMSO_200M_050219_2,4354,GVEALGRRD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4355 20.987 800.0 107290.0 25 0 8166.5 39618 VDNLVLNK 8 115 457.769015343933 913.523477754666 2 457.7688781619072 MULTI CID FTMS 0 0 0 4352 89735.4453125 0.7091172336583796 -3 0.0241107940673828 3 Unmodified _VDNLVLNK_ ENSG00000142182|ENST00000628202|DNMT3L;nc|ENSG00000142182|Q9UJW3-2|DNMT3L 21.74664581756881 0.5868176546531598 4 AADNK 5 6 34.654 0.0 0.0 3.7934 0.0 0.0 396.27461440254064 0.0 396.27461440254064 0.0 10.414930551903224 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 AADNK 3.7934 - 335 1 2.922 71498.4 0.4300000071525574 729 3624 4352 HBL1_DMSO_200M_050219_2,4355 HBL1_DMSO_200M_050219_2,4355,VDNLVLNK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4357 20.995 290.0 242870.0 25 0 20457.0 -1 TPMGPGRTV 9 79 466.2361133081448 930.4576736830896 2 466.2371398806572 MULTI CID FTMS 0 0 0 4356 251609.046875 0.8472611326090889 4 -0.067178726196289 1 Oxidation (M) _TPM(Oxidation (M))GPGRTV_ ENSG00000116977|ENST00000366584|LGALS8;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;nc|ENSG00000116977|O00214-2|LGALS8 23.78978130925829 0.2284941198415988 4 TP{M(Oxidation (M))|F}GP 5 -1 59.553 0.0 0.0 6.4004 0.0 0.0 0.0 428.2273958795532 428.2273958795532 38.58349385648225 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 TP{M(Oxidation (M))|F}GP 6.4004 + + 136 + 1 2.922 58310.1 1.0 730 3625 4356 HBL1_DMSO_200M_050219_2,4357 HBL1_DMSO_200M_050219_2,4357,TPMGPGRTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4358 20.999 201.0 627190.0 25 0 27062.0 + 4925 DGLRQREV 8 146 324.8456929409852 971.5152494231556 3 324.8454162478447 MULTI CID FTMS 0 0 0 4356 351275.78125 0.1503211099324043 -13 0.1331043243408203 2 Unmodified _DGLRQREV_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000569569.5_1_16:56966069-56970730:+|nuORF;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 34.40172386719151 0.3279500639400574 4 DG{I|L}VGQ 6 5 62.828 0.0 0.0 6.467 0.0 0.0 0.0 399.1992891901001 399.1992891901001 49.72865638833312 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 0.0 1.086696871556164 DG{I|L}VGQ 6.467 - 375 + 1 2.922 103238.3 1.0 731 3625 4356 HBL1_DMSO_200M_050219_2,4358 HBL1_DMSO_200M_050219_2,4358,DGLRQREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4359 21.004 280.0 280620.0 25 0 57535.0 40002 VGDRELRQ 8 58 486.7646961136749 971.51483929415 2 486.7646362185478 MULTI CID FTMS 0 0 0 4356 216993.75 0.1750783336742215 -12 0.1292877197265625 3 Unmodified _VGDRELRQ_ ENSG00000074695|ENST00000251047|LMAN1 6.723162845929126 0.7835230281555235 4 DV 2 7 20.969 0.0 0.0 2.1584 0.0 0.0 0.0 754.3969868265452 754.3969868265452 20.880456295278407 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV 2.1584 - 5 + 1 2.922 66053.9 1.0 732 3625 4356 HBL1_DMSO_200M_050219_2,4359 HBL1_DMSO_200M_050219_2,4359,VGDRELRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4360 21.018 800.0 57665.0 25 0 3277.8 -1 FPIFKACFSAN 11 90 651.3206093800219 1300.6266658268437 2 651.3203002810478 MULTI CID FTMS 0 0 0 4356 87127.125 1.0 0 0.0 4 Carbamidomethyl (C) _FPIFKAC(Carbamidomethyl (C))FSAN_ ENSG00000011260|ENST00000225298|UTP18 17.44264345198275 0.6723198055858692 4 DPSQSAN 7 -1 69.373 0.0 0.0 5.3338 0.0 0.0 583.3326283185562 0.0 583.3326283185562 0.0 52.38306055802156 0.0 0.0 0 1.0 0.0 1.579689690656103 0.0 DPSQSAN 5.3338 - 186 1 2.922 39909.1 0.4099999964237213 733 3625 4356 HBL1_DMSO_200M_050219_2,4360 HBL1_DMSO_200M_050219_2,4360,FPIFKACFSAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4363 21.038 800.0 120560.0 25 0 12046.0 -1 0 116 566.0274969777565 3955.141543578096 7 566.3137695193291 MULTI CID FTMS 0 0 0 4362 86003.75 0.5724621319394877 -14 0.1639690399169922 1 4 KTT{I|L}[KT]T{M(Oxidation (M))|F}K 9 -1 50.001 0.0 0.0 1.2642 0.0 0.0 2888.527495216691 0.0 2888.527495216691 0.0 39.03221333259346 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.5114393726401688 KTT{I|L}[KT]T{M(Oxidation (M))|F}K 1.2642 - 463 + 1 2.922 76693.9 0.4699999988079071 734 3627 4362 HBL1_DMSO_200M_050219_2,4363 HBL1_DMSO_200M_050219_2,4363, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4364 21.044 339.0 227760.0 25 0 30825.0 17702 KPTKKNNP 8 84 463.7744220555258 925.5342911778516 2 463.7741882205009 MULTI CID FTMS 0 0 0 4362 162903.515625 0.7731960483130309 -1 0.004007339477539 2 Unmodified _KPTKKNNP_ ENSG00000171094|ENST00000389048|ALK 14.838274106304384 0.6917062315640577 4 KPTKKTSH 8 3 + 36.191 0.0 0.0 3.9103 3.9103 82.168 0.0 0.0 0.0 21.58661594732408 3.443350238481031 3.443350238481031 36.19070971708595 0 0.805462187404089 0.0 0.0 0.0 KPTKKTSH 3.9103 - 103 + 1 2.922 62288.1 1.0 735 3627 4362 HBL1_DMSO_200M_050219_2,4364 HBL1_DMSO_200M_050219_2,4364,KPTKKNNP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4366 21.054 418.0 222320.0 25 0 19753.0 + 41243 VPGGPSRGTVS 11 105 507.2722090575505 1012.5298651819012 2 507.2725097537041 MULTI CID FTMS 0 0 0 4365 236785.171875 0.7453138076219247 -9 0.121713638305664 1 Unmodified _VPGGPSRGTVS_ REV__ENSG00000066735|ENST00000423312|KIF26A 22.774965066869 0.5574395181959457 4 V[PG]GPS[WK]SV 10 -1 + 32.439 0.0 0.0 3.2038 3.2038 73.623 0.0 0.0 0.0 16.330179471710586 4.111691975547025 4.111691975547025 8.284348386451331 0 1.274227503252014 0.0 0.4247425010840047 0.0 V[PG]GPS[WK]SV;V[PG]GPS[WK]VS;V[NP]PS[WK]SV;V[NP]PS[WK]VS 3.2038;2.3856;2.1392;1.321 -;-;-;- 159 + 1 2.922 75847.9 1.0 736 3628 4365 HBL1_DMSO_200M_050219_2,4366 HBL1_DMSO_200M_050219_2,4366,VPGGPSRGTVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4368 21.059 126.0 459750.0 25 0 84207.0 + 39311 VAEDRTRVV 9 79 348.8648950160042 1043.572855648213 3 348.8645507693291 MULTI CID FTMS 0 0 0 4367 287713.375 0.4120797710392428 5 -0.0339698791503906 1 Unmodified _VAEDRTRVV_ ENSG00000143641|ENST00000366672|GALNT2;nc|ENSG00000143641|Q10471-2|GALNT2 26.268140514670165 0.1969607489560049 4 VAEDR 5 4 61.74 0.0 0.0 5.9162 0.0 0.0 0.0 470.26999841861567 470.26999841861567 50.14645333192 0.0 0.0 0.0 0 0.25 1.6989700043360187 0.0 0.7302046884880937 + VAEDR 5.9162 + + 40 + 1 2.922 59996.7 1.0 737 3629 4367 HBL1_DMSO_200M_050219_2,4368 HBL1_DMSO_200M_050219_2,4368,VAEDRTRVV False True VAEDRTRVV 21.05931 348.864550769329 6485950.0 4367.0 nc|ENSG00000143641|Q10471-2|GALNT2;;ENSG00000143641|ENST00000366672|GALNT2 4.334515968958537 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4369 21.061 49.0 1399200.0 25 0 225930.0 + -1 IQRLETMK 8 72 517.7863647654373 1033.5581765976744 2 517.7870361208916 MULTI CID FTMS 0 0 0 4367 1318243.625 0.6420370461915805 -4 0.067178726196289 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 4 KTT[{I|L}P][WP]K 8 -1 46.661 0.0 0.0 4.5146 0.0 0.0 63.997235047019736 0.0 63.997235047019736 0.0 24.02249673628745 0.0 0.0 0 1.424742501084005 0.0 1.3494850021680094 0.3054621874040891 KTT[{I|L}P][WP]K 4.5146 - 137 + 1 2.922 58241.3 1.0 738 3629 4367 HBL1_DMSO_200M_050219_2,4369 HBL1_DMSO_200M_050219_2,4369,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4370 21.065 224.0 368740.0 25 0 22205.0 + 38404 TRATPSAAFL 10 103 345.5268542551239 1033.5587333655717 3 345.5266906619072 MULTI CID FTMS 0 0 0 4367 211046.59375 0.6112908885901297 -5 0.0996017456054687 3 Unmodified _TRATPSAAFL_ REV__ENST00000595789.5_1_19:44057816-44058823:-|nuORF 15.248480904072842 0.5916873121453583 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT{[NV]|[RG]}N{I|L} 8 -1 32.128 0.0 0.0 3.1085 0.0 0.0 0.0 161.0532727466073 161.0532727466073 19.026936619674508 0.0 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.4247425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT{[NV]|[RG]}N{I|L} 3.1085 - 184 1 2.922 75736.1 1.0 739 3629 4367 HBL1_DMSO_200M_050219_2,4370 HBL1_DMSO_200M_050219_2,4370,TRATPSAAFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4374 21.084 495.0 184500.0 25 0 53708.0 + 39313 VAEDRTRVV 9 84 522.792970081935 1043.57138723067 2 522.7935668826103 MULTI CID FTMS 0 0 0 4373 113592.0625 0.3566216100208727 6 -0.1285324096679687 1 Unmodified _VAEDRTRVV_ ENSG00000143641|ENST00000366672|GALNT2;nc|ENSG00000143641|Q10471-2|GALNT2 39.94969957227396 0.0757326808254658 4 VAEDR 5 4 45.049 0.0 0.0 4.3168 0.0 0.0 0.0 470.2708834283813 470.2708834283813 26.888793896675264 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.8494850021680094 + VAEDR 4.3168 + + 33 + 1 2.922 77655.8 1.0 740 3632 4373 HBL1_DMSO_200M_050219_2,4374 HBL1_DMSO_200M_050219_2,4374,VAEDRTRVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4377 21.105 800.0 203250.0 25 0 30297.0 -1 RFQSSAVM 8 124 471.2290983378242 940.4436437424486 2 471.2295715212822 MULTI CID FTMS 0 0 0 4376 185776.78125 0.0932231023475349 -5 0.0339698791503906 1 Oxidation (M) _RFQSSAVM(Oxidation (M))_ ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7 36.12702656103203 0.299085846329477 4 {NN|[MP]|[D{I|L}]|[EV]}T[Y{I|L}]AV{M(Oxidation (M))|F} 8 -1 + 46.813 0.0 0.0 4.9778 4.9778 82.884 0.0 0.0 0.0 8.477325793619528 19.291400330185454 8.477325793619528 10.818566052396749 0 1.2396518287104437 1.6989700043360187 0.6237125054200234 0.0 {NN|[MP]|[D{I|L}]|[EV]}T[Y{I|L}]AV{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]QSSAV{M(Oxidation (M))|F};[YT]A[RN]AV{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SAV{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}][AG]SSAV{M(Oxidation (M))|F};[YE]ASHHVV;[YT]ADHHVV;[YT]A[RN]A{M(Oxidation (M))|F}V;[R{M(Oxidation (M))|F}]QSKE{M(Oxidation (M))|F};[VP]QQ[HS]V{M(Oxidation (M))|F} 4.9778;3.8274;3.0006;2.9811;2.8426;2.3161;1.9349;1.51;0.81249;0.59369 -;+;-;-;-;-;-;-;-;- + 425 1 2.922 129714.6 0.6700000166893005 741 3634 4376 HBL1_DMSO_200M_050219_2,4377 HBL1_DMSO_200M_050219_2,4377,RFQSSAVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4378 21.113 474.0 153330.0 25 0 10260.0 -1 QYRSMDSSM 9 104 568.7189630528949 1135.4233731725897 2 568.7197143435478 MULTI CID FTMS 0 0 0 4376 120403.734375 0.2383363822428819 -4 0.0233173370361328 2 2 Oxidation (M) _QYRSM(Oxidation (M))DSSM(Oxidation (M))_ ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1 12.531546534597751 0.4974689918368763 4 SS{M(Oxidation (M))|F} 3 -1 28.689 0.0 0.0 2.5267 0.0 0.0 796.3139199028616 0.0 796.3139199028616 0.0 -1.1487294160398598 -1.1487294160398598 0.0 0 0.0 0.0 0.5501648626366046 0.0 SS{M(Oxidation (M))|F} 2.5267 + + 385 + 1 2.922 58310.8 1.0 742 3634 4376 HBL1_DMSO_200M_050219_2,4378 HBL1_DMSO_200M_050219_2,4378,QYRSMDSSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4380 21.119 87.0 387710.0 25 0 60767.0 + -1 KEDSVLMMV 9 49 534.2588675606964 1066.5031821881928 2 534.2590209841728 MULTI CID FTMS 0 0 0 4379 596455.625 0.1553816423837108 65 -1.0558414459228516 1 Oxidation (M) _KEDSVLM(Oxidation (M))MV_ REV__ENSG00000183690|ENST00000420999|EFHC2 4.3292370932331545 0.7635526921153418 4 SHV{[QG]|[NA]} 5 -1 20.713 0.0 0.0 1.9422 0.0 0.0 540.2543812482437 0.0 540.2543812482437 0.0 7.949127674554752 0.0 0.0 0 0.5 0.0 0.0 0.0 SHV{[QG]|[NA]} 1.9422 - 14 1 2.934 31398.2 1.0 743 3635 4379 HBL1_DMSO_200M_050219_2,4380 HBL1_DMSO_200M_050219_2,4380,KEDSVLMMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4381 21.121 96.0 636240.0 25 0 60997.0 + 26731 NYYEGPHTSH 10 78 402.172190222018 1203.494741266254 3 402.1721374392509 MULTI CID FTMS 0 0 0 4379 473890.21875 0.1730655693386779 22 -0.4978580474853515 2 Unmodified _NYYEGPHTSH_ chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2;nc|ENSG00000101888|Q9NPJ8-3|NXT2 34.40172386719151 0.2166836008404837 4 [YN]YEGPHTSH 10 0 + 70.583 0.0 0.0 5.8649 5.8649 89.447 0.0 0.0 0.0 60.09881272697172 15.026975159433531 15.026975159433531 26.70941280735775 0 0.0 2.0 0.5 0.0 + + [YN]YEGPHTSH;[YN]YEG{[HG]|PP}{NN|[MP]|[D{I|L}]|[EV]}H;[YN]YW{[HG]|PP}{NN|[MP]|[D{I|L}]|[EV]}H;[YN]YE[HN]{NN|[MP]|[D{I|L}]|[EV]}H 5.8649;3.6455;3.1028;3.1028 +;-;-;- + 148 + 1 2.934 52499.9 1.0 744 3635 4379 HBL1_DMSO_200M_050219_2,4381 HBL1_DMSO_200M_050219_2,4381,NYYEGPHTSH False True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 4382 21.131 608.0 125350.0 25 0 13807.0 + 26728 NYYEGPHTSH 10 101 602.7543928370031 1203.4942327408062 2 602.7542602419853 MULTI CID FTMS 0 0 0 4379 131705.796875 0.1425789862087019 21 -0.4940052032470703 3 Unmodified _NYYEGPHTSH_ chrX:109535977-109536937|16|61.38|0.39|7.28|+|ENST00000218004|NXT2,NXT2;nc|ENSG00000101888|Q9NPJ8-3|NXT2 92.4914307365334 0.009155046393728 4 [YN]YEGPHTSH 10 0 + 87.912 0.0 0.0 7.3047 7.3047 94.371 0.0 0.0 0.0 61.452657408553705 15.026975159433531 15.026975159433531 24.54873480831204 0 0.9247425010840048 2.0 1.5 0.0 + + [YN]YEGPHTSH;[YN]Y{M(Oxidation (M))|F}WSTSH;{[QN]|[E{I|L}]|[KN]}THPGEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]Y[HD][PA]TSH;[YN]Y{M(Oxidation (M))|F}PG[YG]SH;[YN]{[QN]|[E{I|L}]|[KN]}{[CT]|[{M(Oxidation (M))|F}G]}HTSH;[YN]{[{M(Oxidation (M))|F}D]|MM}[{I|L}A]HTSH;[YN]YE[TA][C(Carbamidomethyl (C))Q]R;[YE]{[RE]|[WV]}GEY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]{[QG]|[NA]}[TA]EY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 7.3047;5.2649;4.5851;4.1484;4.0017;3.9004;3.7541;3.7253;3.674;3.6498 +;-;-;-;-;-;-;-;-;- + 1491 + 1 2.934 58126.5 1.0 745 3635 4379 HBL1_DMSO_200M_050219_2,4382 HBL1_DMSO_200M_050219_2,4382,NYYEGPHTSH True True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 4384 21.143 523.0 164780.0 25 0 17185.0 + 3974 DALQKQREV 9 87 543.7986977380976 1085.5828425429952 2 543.7994872927666 MULTI CID FTMS 0 0 0 4383 171914.15625 0.060500533383189 28 -0.5303249359130859 1 Unmodified _DALQKQREV_ ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A 40.23920728925047 0.0741434193262949 4 DA{I|L}QKQ 6 3 76.631 0.0 0.0 7.059 0.0 0.0 0.0 399.19941716042086 399.19941716042086 64.64123782136497 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.8494850021680094 + DA{I|L}QKQ 7.059 + + 174 + 1 2.934 73230.5 1.0 746 3636 4383 HBL1_DMSO_200M_050219_2,4384 HBL1_DMSO_200M_050219_2,4384,DALQKQREV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4385 21.157 800.0 170790.0 25 0 24278.0 -1 FDQQNCTMK 9 157 565.7334636731929 1129.4523744131857 2 565.7342407107353 MULTI CID FTMS 0 0 0 4383 126353.203125 0.3425104382475654 -4 0.0586204528808593 2 Oxidation (M) _FDQQNCTM(Oxidation (M))K_ ENSG00000101204|ENST00000370263|CHRNA4;ENSG00000160716|ENST00000368476|CHRNB2;nc|ENSG00000101204|P43681-2|CHRNA4 13.90604991867851 0.4602628045680013 4 [DV]YK 4 -1 40.916 0.0 0.0 3.6227 0.0 0.0 0.0 621.1767061822874 621.1767061822874 23.94372949959306 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.0 0.9247425010840048 [DV]YK 3.6227 - 460 + 1 2.934 106976.8 0.5299999713897705 747 3636 4383 HBL1_DMSO_200M_050219_2,4385 HBL1_DMSO_200M_050219_2,4385,FDQQNCTMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4386 21.164 372.0 295250.0 25 0 22120.0 -1 0 127 332.6884111889382 0 332.6881286501884 PEAK CID FTMS 0 0 0 4383 124529.171875 0.2854236133140985 -6 0.0666370391845703 3 4 ATT{I|L} 4 -1 16.274 0.0 0.0 2.4533 0.0 0.0 131.0390618530725 143.08281885318596 274.1218807062585 0.0 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.4247425010840047 0.0 ATT{I|L} 2.4533 - 28 + 1 2.934 91319.3 1.0 748 3636 4383 HBL1_DMSO_200M_050219_2,4386 HBL1_DMSO_200M_050219_2,4386, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4387 21.178 800.0 103340.0 25 0 9562.3 + 26712 NYQQTTISH 9 113 546.2584791675379 1090.5024054018756 2 546.2587158083916 MULTI CID FTMS 0 0 0 4383 88881.9921875 0.8957060822444805 -1 0.0185222625732421 4 Unmodified _NYQQTTISH_ ENSG00000164190|ENST00000282516|NIPBL;ENST00000504430.5_1_5:36961623-36995905:+|nuORF;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL 107.99703571036002 0.0067560930197464 4 [YN]QQTT{I|L}SH 9 0 + 88.489 0.0 0.0 8.1145 8.1145 88.127 0.0 0.0 0.0 67.78933977965102 14.973024840566469 14.973024840566469 5.964015683995783 0 0.8494850021680094 2.0 1.3441876774005248 1.0 + + [YN]QQTT{I|L}SH;[YN]QQTTVTH;[YN][AG]QTT{I|L}SH;[YN]Q[AG]TT{I|L}SH;[YN][AG]QTTVTH;[YN]Q[AG]TTVTH;{[QN]|[E{I|L}]|[KN]}{I|L}TTQQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN][AG][AG]TT{I|L}SH;[AG]N{I|L}TTQQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}{I|L}TTQNSW 8.1145;7.5676;7.2701;6.8116;6.7232;6.2647;5.843;5.5127;5.2249;5.1775 +;-;-;-;-;-;-;-;-;- + 814 + 1 2.934 67830.5 0.449999988079071 749 3636 4383 HBL1_DMSO_200M_050219_2,4387 HBL1_DMSO_200M_050219_2,4387,NYQQTTISH True True NYQQTTISH 21.177618 546.258715808392 404092.34375 4383.0 nc|ENSG00000164190|Q6KC79-3|NIPBL;;nc|ENSG00000164190|Q6KC79-2|NIPBL;;ENSG00000164190|ENST00000282516|NIPBL;;ENST00000504430.5_1_5:36961623-36995905:+|nuORF 7.947426954905192 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4389 21.184 143.0 504540.0 25 0 46402.0 + 13612 HPPPPPRLG 9 50 484.2771229677621 966.5396930023244 2 484.2772399783134 MULTI CID FTMS 0 0 0 4388 410472.25 1.0 0 0.0 1 Unmodified _HPPPPPRLG_ REV__ENSG00000156860|ENST00000356166|FBRS 20.453626601364224 0.2830276176381075 4 HPPPP 5 -1 51.013 0.0 0.0 5.2779 0.0 0.0 0.0 438.24775110416255 438.24775110416255 47.51811972993799 0.0 0.0 0.0 0 0.5 1.154901959985743 0.0 0.0 HPPPP 5.2779 + + 24 + 1 2.937 58712.8 1.0 750 3637 4388 HBL1_DMSO_200M_050219_2,4389 HBL1_DMSO_200M_050219_2,4389,HPPPPPRLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4390 21.191 393.0 178650.0 25 0 8355.9 + 3977 DALQKQREV 9 118 362.8683726822079 1085.5832886468238 3 362.8680297732353 MULTI CID FTMS 0 0 0 4388 112304.828125 0.0437610640008245 25 -0.4637870788574219 2 Unmodified _DALQKQREV_ ENSG00000090889|ENST00000374403|KIF4A;ENSG00000226650|ENST00000435029|KIF4B;nc|ENSG00000090889|O95239-2|KIF4A 16.149105407346934 0.3995459350917656 4 {[DA]|[EG]}[Q{I|L}]KAP 7 4 44.991 0.0 0.0 4.1444 0.0 0.0 0.0 359.1587008111938 359.1587008111938 32.51689446210399 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 {[DA]|[EG]}[Q{I|L}]KAP 4.1444 - 110 + 1 2.937 65320.0 1.0 751 3637 4388 HBL1_DMSO_200M_050219_2,4390 HBL1_DMSO_200M_050219_2,4390,DALQKQREV False True DALQKQREV 21.191385 362.868029773235 102123213.0 4388.0 nc|ENSG00000090889|O95239-2|KIF4A;;ENSG00000226650|ENST00000435029|KIF4B;;ENSG00000090889|ENST00000374403|KIF4A 4.894522190093994 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4391 21.197 300.0 238940.0 25 0 37654.0 + 17560 KPQKKNGP 8 78 448.76928694486014 895.5240209565203 2 448.7691833376884 MULTI CID FTMS 0 0 0 4388 177190.328125 0.8987724185254804 -2 0.0646610260009765 3 Unmodified _KPQKKNGP_ REV__ENSG00000119777|ENST00000238788|TMEM214;REV__ENST00000478980.1_1_2:27256012-27257182:+|nuORF;REV__ENST00000495312.1_1_2:27255799-27258254:+|nuORF;REV__nc|ENSG00000119777|Q6NUQ4-2|TMEM214 13.50788311687929 0.7113601687236069 4 KP 2 -1 29.024 0.0 0.0 3.241 0.0 0.0 0.0 667.3523343607282 667.3523343607282 18.42778996552541 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 KP 3.241 + + 16 + 1 2.937 61468.7 1.0 752 3637 4388 HBL1_DMSO_200M_050219_2,4391 HBL1_DMSO_200M_050219_2,4391,KPQKKNGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4392 21.201 244.0 427520.0 25 0 57180.0 + 45014 YPTEGNHRV 9 119 358.17718390295056 1071.5097223090518 3 358.1765930056572 MULTI CID FTMS 0 0 0 4388 171868.765625 0.5712869390654673 -2 0.0646610260009765 4 Unmodified _YPTEGNHRV_ ENSG00000196290|ENST00000409020|NIF3L1;nc|ENSG00000196290|Q9GZT8-2|NIF3L1;nc|ENSG00000196290|Q9GZT8-3|NIF3L1 19.62595529434964 0.305431704817896 4 YPTEGNHRV 9 0 + 57.578 0.0 0.0 5.3735 5.3735 83.06 0.0 0.0 0.0 24.821391882652925 1.075543018713816 1.075543018713816 9.208187539523747 0 0.0 1.154901959985743 0.0 0.4247425010840047 + + YPTEGNHRV;YPTEGGGHRV;[TP]{[{M(Oxidation (M))|F}H]|[RQ]}VET{[QN]|[E{I|L}]|[KN]};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}EVT{[QN]|[E{I|L}]|[KN]};[TP]C(Carbamidomethyl (C))[RP]VT{[QN]|[E{I|L}]|[KN]};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}VMV{[QN]|[E{I|L}]|[KN]};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}ETV{[QN]|[E{I|L}]|[KN]};[TP]C(Carbamidomethyl (C))[RP]TV{[QN]|[E{I|L}]|[KN]};[TP][CG][RP]VT{[QN]|[E{I|L}]|[KN]};[TP]{[{M(Oxidation (M))|F}H]|[RQ]}ETP{M(Oxidation (M))|F}P 5.3735;4.5141;3.6707;3.3897;3.2731;2.829;2.548;2.4314;2.4138;2.3308 +;-;-;-;-;-;-;-;-;- + 211 + 1 2.937 92824.6 1.0 753 3637 4388 HBL1_DMSO_200M_050219_2,4392 HBL1_DMSO_200M_050219_2,4392,YPTEGNHRV False True YPTEGNHRV 21.201399 358.176593005657 4179803.25 4388.0 ENSG00000196290|ENST00000409020|NIF3L1;;nc|ENSG00000196290|Q9GZT8-2|NIF3L1;;nc|ENSG00000196290|Q9GZT8-3|NIF3L1 7.395638147989909 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4394 21.21 323.0 209190.0 25 0 31986.0 29026 QEEGEYYNV 9 106 377.49146707884194 1129.4525718367258 3 377.4916869997978 MULTI CID FTMS 0 0 0 4393 217651.359375 0.7904145247067683 -1 0.023773193359375 1 Unmodified _QEEGEYYNV_ ENSG00000126583|ENST00000263431|PRKCG;ENSG00000154229|ENST00000413366|PRKCA;ENST00000284384.6_1_17:64637544-64770230:+|nuORF;nc|ENSG00000126583|P05129-2|PRKCG 4.3292370932331545 0.7635526921153418 4 V 1 8 14.604 0.0 0.0 1.293 0.0 0.0 1012.3731631226618 0.0 1012.3731631226618 0.0 -6.365006360318688 -6.365006360318688 0.0 0 0.0 0.0 0.0 0.0 + V 1.293 + + 99 + 1 2.937 62938.5 1.0 754 3638 4393 HBL1_DMSO_200M_050219_2,4394 HBL1_DMSO_200M_050219_2,4394,QEEGEYYNV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4395 21.214 237.0 259620.0 25 0 30554.0 + 115 AAKDPSPSV 9 86 436.229569978089 870.444587022978 2 436.2295715212822 MULTI CID FTMS 0 0 0 4393 278856.0 0.3045419638206526 -8 0.1365489959716797 2 Unmodified _AAKDPSPSV_ ENSG00000132361|ENST00000651024|CLUH;nc|ENSG00000132361|O75153|CLUH 45.69961567697781 0.0497987121815769 4 AATAAPS 7 5 25.925 0.0 0.0 2.9783 0.0 0.0 0.0 298.14007751872447 298.14007751872447 5.293349709239102 0.0 0.0 0.0 0 1.3807196863200843 1.5228787452803376 0.4247425010840047 0.0 AATAAPS 2.9783 - 315 1 2.937 53814.2 1.0 755 3638 4393 HBL1_DMSO_200M_050219_2,4395 HBL1_DMSO_200M_050219_2,4395,AAKDPSPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4396 21.226 653.0 325400.0 25 0 19638.0 19569 LFSLCLAEK 9 183 341.85760144917265 1022.550974947718 3 341.8573791384697 MULTI CID FTMS 0 0 0 4393 178535.203125 0.716441889516272 -2 0.0699119567871093 3 Unmodified _LFSLCLAEK_ ENST00000477988.1_1_2:183790415-183790502:-|nuORF 18.1463463914782 0.3454829746528889 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AADVH 7 8 45.932 0.0 0.0 4.4919 0.0 0.0 0.0 251.15186603596047 251.15186603596047 28.145455530162465 0.0 0.0 0.0 0 1.4916440611282624 0.4685210829577448 0.0 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AADVH 4.4919 - 119 + 1 2.937 170954.8 1.0 756 3638 4393 HBL1_DMSO_200M_050219_2,4396 HBL1_DMSO_200M_050219_2,4396,LFSLCLAEK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4397 21.239 800.0 97829.0 25 0 6606.1 + -1 LMVNNGKID 9 108 510.2610878906211 1018.5076228480424 2 510.2607604861259 MULTI CID FTMS 0 0 0 4393 115961.0625 1.0 0 0.0 4 Oxidation (M) _LM(Oxidation (M))VNNGKID_ REV__ENSG00000176601|ENST00000392915|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-3|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-4|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-5|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-7|MAP3K19 14.838274106304384 0.4350285940865338 4 YPPN 4 -1 49.285 0.0 0.0 4.8389 0.0 0.0 0.0 544.2732637994749 544.2732637994749 32.94190571133676 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPPN 4.8389 - 238 + 1 2.937 69447.8 0.5199999809265137 757 3638 4393 HBL1_DMSO_200M_050219_2,4397 HBL1_DMSO_200M_050219_2,4397,LMVNNGKID False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4398 21.253 800.0 128660.0 25 0 25149.0 + 38042 TPDPPLAPSR 10 115 525.7838106225134 1049.5530683118268 2 525.7848388552666 MULTI CID FTMS 0 0 0 4393 92425.4375 0.5132406204011313 -5 0.1172447204589843 5 Unmodified _TPDPPLAPSR_ REV__ENSG00000187902|ENST00000376325|SHISA7;REV__ENST00000416792.1_3_19:55944525-55949973:-|nuORF 17.11289562659939 0.5604042439455784 4 T[{I|L}P][WP]K 6 -1 37.478 0.0 0.0 3.5709 0.0 0.0 309.134721021196 0.0 309.134721021196 0.0 22.23242737174388 0.0 0.0 0 1.805462187404089 0.0 0.5 0.3252574989159953 T[{I|L}P][WP]K 3.5709 - 88 + 1 2.937 85087.1 0.4600000083446502 758 3638 4393 HBL1_DMSO_200M_050219_2,4398 HBL1_DMSO_200M_050219_2,4398,TPDPPLAPSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4400 21.258 33.0 1855700.0 25 0 101340.0 4927 DGLRQRVE 8 110 324.8456929409852 971.5152494231556 3 324.8454772830009 MULTI CID FTMS 0 0 0 4399 1576489.25 0.6746255406883496 1 -0.0088653564453125 1 Unmodified _DGLRQRVE_ ENSG00000115255|ENST00000233596|REEP6;ENST00000591735.2_1_19:1491211-1495711:+|nuORF;nc|ENSG00000115255|Q96HR9|REEP6 12.240655878213236 0.7300809844188293 4 DG{I|L}RQ 5 3 45.499 0.0 0.0 4.6833 0.0 0.0 0.0 399.2003267877563 399.2003267877563 35.01475694497078 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.3807196863200844 + DG{I|L}RQ 4.6833 + + 160 + 1 2.937 53410.7 1.0 759 3639 4399 HBL1_DMSO_200M_050219_2,4400 HBL1_DMSO_200M_050219_2,4400,DGLRQRVE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4401 21.262 216.0 249660.0 25 0 20103.0 -1 TPPRGMASV 9 90 466.2361133081448 930.4576736830896 2 466.2373535037041 MULTI CID FTMS 0 0 0 4399 132069.640625 0.4447275433414911 18 -0.357574462890625 2 Oxidation (M) _TPPRGM(Oxidation (M))ASV_ ENSG00000130511|ENST00000270061|SSBP4;ENST00000589764.1_1_18:12067489-12068164:-|nuORF;ENST00000600244.5_1_19:18542527-18543889:+|nuORF;ENST00000601919.5_1_19:18542647-18543480:+|nuORF;nc|ENSG00000130511|Q9BWG4-2|SSBP4 25.399314129420983 0.2080152500878129 4 TP{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}[PG]SV 9 -1 + 51.065 0.0 0.0 5.4882 5.4882 87.352 0.0 0.0 0.0 27.86893107080459 5.417112166456448 5.417112166456448 21.2113751626007 0 0.3252574989159953 1.5228787452803376 0.3252574989159953 0.0 TP{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}[PG]SV;TP{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}[TA][PA];{[DS]|[MA]|[CV]|TT}R[QP]GS[KG];{[VA]|[{I|L}G]}[H{I|L}][{M(Oxidation (M))|F}T]P{M(Oxidation (M))|F};{[VA]|[{I|L}G]}{[MG]|[TS]}[QP]GS[KG] 5.4882;3.2085;1.5753;0.76447;0.013256 -;-;-;-;- 254 + 1 2.937 45701.9 1.0 760 3639 4399 HBL1_DMSO_200M_050219_2,4401 HBL1_DMSO_200M_050219_2,4401,TPPRGMASV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4403 21.267 86.0 864900.0 25 0 172130.0 + 39274 VAAWELRQ 8 59 486.7646961136749 971.51483929415 2 486.7648803591728 MULTI CID FTMS 0 0 0 4402 820706.8125 0.6621756671221255 3 -0.0563182830810546 1 Unmodified _VAAWELRQ_ REV__ENST00000555805.5_1_12:57157039-57157186:+|nuORF 8.593279151180031 0.7721714526254883 4 DV 2 -1 20.969 0.0 0.0 2.1584 0.0 0.0 0.0 754.3968344419541 754.3968344419541 18.494850021680094 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV 2.1584 - 8 + 1 2.937 67220.9 1.0 761 3640 4402 HBL1_DMSO_200M_050219_2,4403 HBL1_DMSO_200M_050219_2,4403,VAAWELRQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4404 21.281 800.0 100240.0 25 0 8396.0 + 45015 YPTEGNHRV 9 85 536.7623398941379 1071.5101268550757 2 536.7624999880791 MULTI CID FTMS 0 0 0 4402 67767.46875 0.6809934131342108 1 -0.032449722290039 2 Unmodified _YPTEGNHRV_ ENSG00000196290|ENST00000409020|NIF3L1;nc|ENSG00000196290|Q9GZT8-2|NIF3L1;nc|ENSG00000196290|Q9GZT8-3|NIF3L1 42.312485326615175 0.0627620958981271 4 YPTE 4 5 61.23 0.0 0.0 5.7144 0.0 0.0 0.0 578.2811093985605 578.2811093985605 40.7234182151732 0.0 0.0 0.0 0 0.6549471895720984 2.0 0.4247425010840047 0.0 + YPTE 5.7144 + + 395 + 1 2.937 71658.3 0.4699999988079071 762 3640 4402 HBL1_DMSO_200M_050219_2,4404 HBL1_DMSO_200M_050219_2,4404,YPTEGNHRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4405 21.295 800.0 73966.0 25 0 4011.3 -1 0 50 805.8981162562628 4024.454198948314 5 806.2975952029228 MULTI CID FTMS 0 0 0 4402 60971.9453125 1.0 0 0.0 3 4 G 1 -1 3.9794 0.0 0.0 0.09888 0.0 0.0 3491.22343830554 473.1915682428344 3964.4150065483736 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.09888 - 4 + 1 2.937 48427.7 0.3400000035762787 763 3640 4402 HBL1_DMSO_200M_050219_2,4405 HBL1_DMSO_200M_050219_2,4405, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4408 21.305 178.0 325510.0 25 0 25474.0 + 25255 MVPETTHEA 9 88 507.73172809185127 1013.4489032505026 2 507.7319518923759 MULTI CID FTMS 0 0 0 4407 165880.03125 0.4609156591606032 -38 0.5317268371582031 1 Unmodified _MVPETTHEA_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 14.838274106304384 0.4350285940865338 4 {M(Oxidation (M))|F}EP[DP] 5 7 15.234 0.0 0.0 1.5032 0.0 0.0 410.1814747541032 0.0 410.1814747541032 0.0 6.271774472715313 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F}EP[DP] 1.5032 - 118 1 2.937 51148.3 1.0 764 3642 4407 HBL1_DMSO_200M_050219_2,4408 HBL1_DMSO_200M_050219_2,4408,MVPETTHEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4409 21.318 800.0 192410.0 25 0 40427.0 + 36603 TAPEDTRRI 9 96 529.782948483915 1057.55134403463 2 529.7832519412041 MULTI CID FTMS 0 0 0 4407 153461.6875 0.4008886079210614 -6 0.167093276977539 2 Unmodified _TAPEDTRRI_ ENSG00000140650|ENST00000268261|PMM2;ENST00000567697.1_1_16:8904837-8941679:+|nuORF 36.506200033944 0.094635877243972 4 TA[EP]D[RK]NK 9 3 + 53.009 0.0 0.0 5.0124 5.0124 79.136 0.0 0.0 0.0 27.322675494693065 7.33493780657583 7.33493780657583 7.413412749208426 0 0.4247425010840047 2.0 0.0 1.089136830878453 TA[EP]D[RK]NK;TA{I|L}[WH][R{M(Oxidation (M))|F}]Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RK]D[EP][PG];[WR][VS]N{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};[VS][WR]N{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};T[WK]N[WR][PA] 5.0124;4.3114;1.8459;0.88911;0.39469;0.25352 -;-;-;-;-;- 195 + 1 2.937 121245.5 0.5899999737739563 765 3642 4407 HBL1_DMSO_200M_050219_2,4409 HBL1_DMSO_200M_050219_2,4409,TAPEDTRRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4411 21.326 285.0 371930.0 25 0 47554.0 + + 39462 VAPPKAHEV 9 117 316.5153794109058 946.5243088329172 3 316.5149719119072 MULTI CID FTMS 0 0 0 4410 189321.78125 0.7276158597588585 3 -0.1053943634033203 1 Unmodified _VAPVRDPPP_ ENST00000512621.5_1_4:99993722-100006301:-|nuORF;ENST00000508511.5_1_4:99997418-100009857:-|nuORF;ENST00000507102.5_2_4:100003111-100009857:-|nuORF;ENSG00000187758|ENST00000209668|ADH1A;ENSG00000198099|ENST00000265512|ADH4;ENSG00000248144|ENST00000515683|ADH1C;ENSG00000197894|ENST00000296412|ADH5;nc|ENSG00000198099|P08319-2|ADH4 23.78978130925829 0.2284941198415988 4 {[VA]|[{I|L}G]}PPKA{NN|[MP]|[D{I|L}]|[EV]}H 9 -1 + 47.56 0.0 0.0 5.0247 5.0247 84.709 0.0 0.0 0.0 21.15987537940164 6.42667503568731 6.42667503568731 16.76091259055681 0 0.3252574989159953 1.6989700043360187 0.3494850021680094 0.0 {[VA]|[{I|L}G]}PPKA{NN|[MP]|[D{I|L}]|[EV]}H;{[VA]|[{I|L}G]}PV{[QS]|[NT]}[{I|L}P]H;{[VA]|[{I|L}G]}PV{[QS]|[NT]}[H{I|L}]P;[PA]{[QS]|[NT]}[Y{I|L}][R{I|L}] 5.0247;3.2539;3.2539;1.2015 -;-;-;- 281 + 1 2.937 88251.6 1.0 766 3643 4410 HBL1_DMSO_200M_050219_2,4411 HBL1_DMSO_200M_050219_2,4411,VAPVRDPPP False False VAPPKAHEV 21.326198 316.514971911907 1325596.375 4410.0 ENST00000512621.5_1_4:99993722-100006301:-|nuORF;;ENST00000508511.5_1_4:99997418-100009857:-|nuORF;;ENST00000507102.5_2_4:100003111-100009857:-|nuORF;;ENSG00000187758|ENST00000209668|ADH1A;;ENSG00000198099|ENST00000265512|ADH4;;ENSG00000248144|ENST00000515683|ADH1C;;ENSG00000197894|ENST00000296412|ADH5;;nc|ENSG00000198099|P08319-2|ADH4 6.15527884165446 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4412 21.33 196.0 308140.0 25 0 24754.0 + 40169 VGPGLGWAASV 11 83 507.2722090575505 1012.5298651819012 2 507.2721130251884 MULTI CID FTMS 0 0 0 4410 118017.8984375 0.3714775235098987 6 -0.2250080108642578 2 Unmodified _VGPGLGWAASV_ REV__ENST00000396465.5_1_8:74204990-74206187:-|nuORF 13.042465956692816 0.7638483625850725 4 [RP]G 3 -1 15.502 0.0 0.0 1.531 0.0 0.0 0.0 699.3440694289852 699.3440694289852 5.2410497646861405 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 [RP]G 1.531 - 109 + 1 2.937 53411.1 1.0 767 3643 4410 HBL1_DMSO_200M_050219_2,4412 HBL1_DMSO_200M_050219_2,4412,VGPGLGWAASV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4413 21.333 169.0 590660.0 25 0 126380.0 -1 LSVHEVVEKQ 10 81 403.887806312762 1208.641589538486 3 403.8876830935478 MULTI CID FTMS 0 0 0 4410 303272.6875 0.0742196249540139 -26 0.4184169769287109 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSVHEVVEKQ_ ENST00000342315.8_1_12:113424985-113425036:+|nuORF 9.38312468134398 0.6832340498775793 4 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 -1 38.785 0.0 0.0 3.209 0.0 0.0 0.0 394.2207711305462 394.2207711305462 26.02059991327962 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 3.209 - 176 + 1 2.937 79660.0 1.0 768 3643 4410 HBL1_DMSO_200M_050219_2,4413 HBL1_DMSO_200M_050219_2,4413,LSVHEVVEKQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4414 21.347 800.0 85135.0 25 0 2722.0 + 8806 EWWLHYYSEDY 11 104 795.8298219708715 1589.645091008543 2 795.8300048708916 MULTI CID FTMS 0 0 0 4410 132289.921875 1.0 0 0.0 4 Unmodified _EWWLHYYSEDY_ REV__ENST00000547733.1_1_12:39687284-39687350:-|nuORF 1.3295316138638542 0.8688751186870782 4 GGGSGY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GSNGSY 14 -1 93.489 0.0 0.0 5.8811 0.0 0.0 268.11180625623075 0.0 268.11180625623075 0.0 64.53923481611878 0.0 0.0 0 0.3252574989159953 0.0 2.084121882396211 0.3054621874040891 GGGSGY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GSNGSY 5.8811 - 14281 + 1 2.937 53281.0 0.5 769 3643 4410 HBL1_DMSO_200M_050219_2,4414 HBL1_DMSO_200M_050219_2,4414,EWWLHYYSEDY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4416 21.352 40.0 987050.0 25 0 216880.0 -1 MLLTCVVM 8 57 471.2290983378242 940.4436437424486 2 471.2292358279228 MULTI CID FTMS 0 0 0 4415 1245345.625 0.6249165362661802 5 -0.1963443756103515 1 2 Oxidation (M) _M(Oxidation (M))LLTCVVM(Oxidation (M))_ ENSG00000108433|ENST00000640051|GOSR2 9.347437153973935 0.7675937258251505 4 V{M(Oxidation (M))|F} 2 -1 30.217 0.0 0.0 3.213 0.0 0.0 676.3295212832674 0.0 676.3295212832674 0.0 20.75257498915996 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 V{M(Oxidation (M))|F} 3.213 + + 15 + 1 2.937 37637.3 1.0 770 3644 4415 HBL1_DMSO_200M_050219_2,4416 HBL1_DMSO_200M_050219_2,4416,MLLTCVVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4417 21.362 583.0 131150.0 25 0 17495.0 + 43753 YEDIAQKS 8 97 477.232560581795 952.45056823039 2 477.2328369021416 MULTI CID FTMS 0 0 0 4415 105577.2890625 0.9174665935710976 -1 0.0286636352539062 2 Unmodified _YEDIAQKS_ ENSG00000167768|ENST00000252244|KRT1 41.95555342248728 0.2015749177957339 4 YED{I|L}AQKS 8 0 + 75.98 0.0 0.0 7.9773 7.9773 92.627 0.0 0.0 0.0 55.20108008578712 11.594345217579471 11.594345217579471 9.262137858390815 0 0.9247425010840048 2.0 0.3252574989159953 0.6549471895720985 + + YED{I|L}AQKS;YED{I|L}A[AG]KS;YE[{I|L}A]DQKS;YE[{I|L}A]D[AG]KS;YED[KT][QA]V;YE[{I|L}A]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TP] 7.9773;7.0048;6.1029;5.1304;4.4994;3.0468 +;-;-;-;-;- + 183 + 1 2.937 62892.5 1.0 771 3644 4415 HBL1_DMSO_200M_050219_2,4417 HBL1_DMSO_200M_050219_2,4417,YEDIAQKS False True YEDIAQKS 21.362309 477.232836902142 766526.5 4415.0 ENSG00000167768|ENST00000252244|KRT1 6.212716738382976 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4418 21.364 75.0 1253000.0 25 0 249450.0 + 45875 YYRDARSY 8 81 365.17369354753146 1092.4992512427943 3 365.1733886599541 MULTI CID FTMS 0 0 0 4415 772863.3125 0.428791960420995 -4 0.0849819183349609 3 Unmodified _YYRDARSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 27.628801355627647 0.4629596117395134 4 YYRDARSY 8 0 + 69.093 0.0 0.0 6.3243 6.3243 88.915 0.0 0.0 0.0 62.66625062555555 13.399480616943508 13.399480616943508 12.150093250860508 0 0.0 1.3979400086720375 0.0 0.4247425010840047 + + YYRDARSY;YYRD[WK]Y;YYRDY[WK];YYRYD[WK];YYYRD[WK];YYRY[QP]{[CT]|[{M(Oxidation (M))|F}G]};YY[WR][VG]SY;YYYR[QP]{[CT]|[{M(Oxidation (M))|F}G]};Y{[RE]|[WV]}[YG]RSY;Y{[RE]|[WV]}[WR]{[{M(Oxidation (M))|F}H]|[RQ]} 6.3243;5.2122;4.8898;4.0163;3.7408;3.4847;3.4428;3.2091;1.6121;1.0511 +;-;-;-;-;-;-;-;-;- + 264 + 1 2.937 79759.3 1.0 772 3644 4415 HBL1_DMSO_200M_050219_2,4418 HBL1_DMSO_200M_050219_2,4418,YYRDARSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4419 21.366 83.0 971780.0 25 0 110780.0 + 36604 TAPEDTRRI 9 81 353.5245639637208 1057.5518624913625 3 353.5243713259697 MULTI CID FTMS 0 0 0 4415 723821.6875 0.7200254881186733 -6 0.1456966400146484 4 Unmodified _TAPEDTRRI_ ENSG00000140650|ENST00000268261|PMM2;ENST00000567697.1_1_16:8904837-8941679:+|nuORF 31.26834338654808 0.1333407332142048 4 TAPED 5 4 59.196 0.0 0.0 5.5974 0.0 0.0 0.0 541.3218157929873 541.3218157929873 40.49926291259105 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + TAPED 5.5974 + + 29 + 1 2.937 71698.0 1.0 773 3644 4415 HBL1_DMSO_200M_050219_2,4419 HBL1_DMSO_200M_050219_2,4419,TAPEDTRRI False True TAPEDTRRI 21.365908 353.52437132597 11163048.0 4415.0 ENST00000567697.1_1_16:8904837-8941679:+|nuORF;;ENSG00000140650|ENST00000268261|PMM2 2.8825395107269287 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4420 21.38 800.0 130720.0 25 0 7385.5 + 29877 QRISKMQECA 10 146 398.53049265031296 1192.569648551139 3 398.5305358767509 MULTI CID FTMS 0 0 0 4415 101856.828125 1.0 0 0.0 5 Unmodified _QRISKMQECA_ REV__ENSG00000167615|ENST00000326764|LENG8;REV__nc|ENSG00000167615|Q96PV6-1|LENG8 6.723162845929126 0.6955379296933136 4 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}DK{I|L} 6 -1 27.497 0.0 0.0 2.3057 0.0 0.0 0.0 436.0970811240517 436.0970811240517 14.0018312907727 0.0 0.0 0.0 0 0.0 0.0 0.5 0.4247425010840047 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}DK{I|L} 2.3057 - 124 1 2.937 86300.3 0.4399999976158142 774 3644 4415 HBL1_DMSO_200M_050219_2,4420 HBL1_DMSO_200M_050219_2,4420,QRISKMQECA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4422 21.396 800.0 95559.0 25 0 8445.9 + + 12916 GYGGGYGGQSSM 12 118 568.7189630528949 1135.4233731725897 2 568.7194091677666 MULTI CID FTMS 0 0 0 4421 153773.625 0.3043913019568549 7 -0.1962051391601562 1 Unmodified _GYNGGGYNDYG_ ENST00000515481.5_1_5:179043097-179043181:-|nuORF;ENSG00000126945|ENST00000316594|HNRNPH2;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 22.65808497894818 0.560183898709508 4 [YG]GGGYNQSS{M(Oxidation (M))|F} 11 -1 [YG]GG + + 48.491 24.922 7.4586 4.2707 4.2707 49.67 0.0 0.0 0.0 0.0 2.0047037163839647 0.0 0.0 0 0.6861818737241735 0.0 1.069341519366547 0.25 [YG]GGGYNQSS{M(Oxidation (M))|F} 4.2707 - 4623 + 1 2.937 60806.8 0.7300000190734863 775 3645 4421 HBL1_DMSO_200M_050219_2,4422 HBL1_DMSO_200M_050219_2,4422,GYNGGGYNDYG False False GYGGGYGGQSSM 21.396096 568.719409167767 5324124.0 4421.0 ENST00000515481.5_1_5:179043097-179043181:-|nuORF;;ENSG00000126945|ENST00000316594|HNRNPH2;;ENSG00000169045|ENST00000393432|HNRNPH1;;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 8.071645259857178 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4423 21.41 800.0 37611.0 25 0 6138.2 -1 0 34 1049.7710913161782 3146.291444548735 3 1050.439135730267 MULTI CID FTMS 0 0 0 4421 82621.375 0.9598891940107764 -1 0.0326290130615234 2 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.22216 0.0 0.0 1182.4140881140115 1813.7971357243075 2996.211223838319 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.22216 - 2 + 1 2.937 36884.1 0.3300000131130218 776 3645 4421 HBL1_DMSO_200M_050219_2,4423 HBL1_DMSO_200M_050219_2,4423, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4424 21.424 800.0 93395.0 25 0 16107.0 -1 0 30 1093.3812914142766 3277.12204484303 3 1093.715869128704 MULTI CID FTMS 0 0 0 4421 73679.078125 0.3404903693970169 -20 0.3927059173583984 3 4 E 1 -1 6.9897 0.0 0.0 0.21329 0.0 0.0 2620.892749044005 524.1621798150999 3145.054928859105 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21329 - 1 + 1 2.937 64878.2 0.3100000023841858 777 3645 4421 HBL1_DMSO_200M_050219_2,4424 HBL1_DMSO_200M_050219_2,4424, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4426 21.429 118.0 587690.0 25 0 136350.0 + 45878 YYRDARSY 8 53 547.2565997112993 1092.4986464893984 2 547.2569457888603 MULTI CID FTMS 0 0 0 4425 434435.96875 0.7932290229497451 -5 0.1292629241943359 1 Unmodified _YYRDARSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 47.74868867922204 0.1498366402366518 4 YYRD{[QV]|[N{I|L}]|[RA]|[KV]}SY 8 0 + 69.474 0.0 0.0 6.3592 6.3592 88.942 0.0 0.0 0.0 38.3424440917961 11.8943306386236 11.8943306386236 11.8943306386236 0 1.5356668758921828 2.0 0.3494850021680094 0.4247425010840047 + + YYRD{[QV]|[N{I|L}]|[RA]|[KV]}SY;YYRD[WK]Y;YYRDY[WK];YYRYD[WK];{[{M(Oxidation (M))|F}H]|[RQ]}[TP]D{[QV]|[N{I|L}]|[RA]|[KV]}SY;[HM][{I|L}T]D{[QV]|[N{I|L}]|[RA]|[KV]}SY;[HM]{[QV]|[N{I|L}]|[RA]|[KV]}D[{I|L}T]SY;{[{M(Oxidation (M))|F}H]|[RQ]}[TP]DY[WK];{[{M(Oxidation (M))|F}H]|[RQ]}[TP]D[WK]Y;{[{M(Oxidation (M))|F}H]|[RQ]}[TP]YD[WK] 6.3592;5.2705;5.2705;4.173;2.7654;2.5833;2.1348;1.6704;1.6704;0.57296 +;-;-;-;-;-;-;-;-;- + 173 + 1 2.937 58019.5 1.0 778 3646 4425 HBL1_DMSO_200M_050219_2,4426 HBL1_DMSO_200M_050219_2,4426,YYRDARSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4427 21.435 367.0 256120.0 25 0 26358.0 -1 0 112 332.6884111889382 0 332.6883117556572 PEAK CID FTMS 0 0 0 4425 164656.84375 0.3773971238417499 4 -0.1236305236816406 2 4 ATT{I|L} 4 -1 15.846 0.0 0.0 2.3888 0.0 0.0 131.04011360082444 143.08277307681877 274.12288667764324 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 ATT{I|L} 2.3888 - 24 + 1 2.937 79790.1 1.0 779 3646 4425 HBL1_DMSO_200M_050219_2,4427 HBL1_DMSO_200M_050219_2,4427, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4428 21.446 591.0 158090.0 25 0 21484.0 + -1 LTGWPLTMK 9 89 531.7842118363815 1061.5538707395629 2 531.7843505740166 MULTI CID FTMS 0 0 0 4425 117544.25 0.3363632786650689 -43 0.6608753204345703 3 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 32.78568957990786 0.1150597335874693 4 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K 9 -1 + 53.438 0.0 0.0 5.034 5.034 85.46 0.0 0.0 0.0 2.996812376923046 42.46925385715571 2.996812376923046 22.047057244614475 0 1.8494850021680087 0.0 0.8807196863200843 0.3494850021680094 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;[RH]T[PG][HV]MK;[KT]T{[TV]|[{I|L}S]}HGV[YG];[PG][R{M(Oxidation (M))|F}][{I|L}P]TT{[CA]|SS};[HT]R[PG][HV]MK;[PS]{[TV]|[{I|L}S]}[RV]E{M(Oxidation (M))|F}K;[PS]{[TV]|[{I|L}S]}E[RV]{M(Oxidation (M))|F}K;[RH][RV][YG]{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]HR[YG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]HG[YR] 5.034;2.9571;2.5408;2.0668;1.8492;1.8316;1.3821;1.2174;1.0743;0.95661 -;-;-;-;-;-;-;-;-;- 411 1 2.937 76957.1 1.0 780 3646 4425 HBL1_DMSO_200M_050219_2,4428 HBL1_DMSO_200M_050219_2,4428,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4429 21.46 800.0 166910.0 25 0 20308.0 + 25023 MPQPPPLPHPV 11 88 605.3281216858676 1208.641690438535 2 605.3282348513603 MULTI CID FTMS 0 0 0 4425 104866.03125 0.25375511807201 -22 0.4692306518554687 4 Unmodified _MPQPPPLPHPV_ REV__ENST00000462256.5_1_6:31498213-31500844:-|nuORF;REV__ENST00000481456.1_1_6:31500550-31500844:-|nuORF 18.1463463914782 0.6576820063886638 4 [{I|L}T]HPPEHQ 8 -1 57.96 0.0 0.0 4.7955 0.0 0.0 0.0 266.16269861392817 266.16269861392817 46.54008625686876 0.0 0.0 0.0 0 1.7302046884880935 0.0 0.0 0.6747425010840047 [{I|L}T]HPPEHQ 4.7955 - 282 + 1 2.937 100460.6 0.4699999988079071 781 3646 4425 HBL1_DMSO_200M_050219_2,4429 HBL1_DMSO_200M_050219_2,4429,MPQPPPLPHPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4430 21.473 800.0 163070.0 25 0 26023.0 + -1 PVMLVPMDP 9 189 344.170507480358 0 344.1705200076103 PEAK CID FTMS 0 0 0 4425 94479.171875 0.6894893324527331 7 -0.1561298370361328 5 2 Oxidation (M) _PVM(Oxidation (M))LVPM(Oxidation (M))DP_ REV__ENST00000560634.1_1_15:84858634-84860056:+|nuORF 5.731851221503515 0.3444685223463734 4 M 1 -1 3.4949 0.0 0.0 0.50921 0.0 0.0 361.1738009924326 191.0826357477172 552.2564367401498 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.50921 + + 4 + 1 2.937 104175.4 0.4000000059604645 782 3646 4425 HBL1_DMSO_200M_050219_2,4430 HBL1_DMSO_200M_050219_2,4430,PVMLVPMDP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4432 21.478 86.0 555340.0 25 0 81561.0 + 116 AAKDPSPSV 9 72 436.229569978089 870.444587022978 2 436.2297546267509 MULTI CID FTMS 0 0 0 4431 840610.875 0.9180411634732516 1 -0.0324134826660156 1 Unmodified _AAKDPSPSV_ ENSG00000132361|ENST00000651024|CLUH;nc|ENSG00000132361|O75153|CLUH 71.92227651296345 0.0203558744033348 4 AAQDPSPS 8 2 40.701 0.0 0.0 4.6759 0.0 0.0 0.0 114.05652033023672 114.05652033023672 -5.882797911633389 0.0 -5.882797911633389 0.0 0 1.548455006504028 1.5228787452803376 0.7134679910804405 0.0 AAQDPSPS 4.6759 - 215 + 1 2.937 43400.4 1.0 783 3647 4431 HBL1_DMSO_200M_050219_2,4432 HBL1_DMSO_200M_050219_2,4432,AAKDPSPSV True True AAKDPSPSV 21.478193 436.229754626751 26766954.0 4431.0 ENSG00000132361|ENST00000651024|CLUH;;nc|ENSG00000132361|O75153|CLUH 7.3062106768290205 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4433 21.492 800.0 124780.0 25 0 18883.0 + 13613 HPPPPPRLG 9 92 484.2771229677621 966.5396930023244 2 484.2772704958916 MULTI CID FTMS 0 0 0 4431 67797.78125 0.1651701942092309 10 -0.1374130249023437 2 Unmodified _HPPPPPRLG_ REV__ENSG00000156860|ENST00000356166|FBRS 15.847184025352805 0.4077185912009129 4 HPPP 4 -1 46.938 0.0 0.0 4.8563 0.0 0.0 0.0 535.2993887295473 535.2993887295473 43.83925646871916 0.0 0.0 0.0 0 0.5 1.0 0.0 0.0 HPPP 4.8563 + + 41 + 1 2.937 77525.5 0.4799999892711639 784 3647 4431 HBL1_DMSO_200M_050219_2,4433 HBL1_DMSO_200M_050219_2,4433,HPPPPPRLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4434 21.506 800.0 95977.0 25 0 20253.0 + 4088 DANHTGAVV 9 110 442.2170216745062 882.4194904158124 2 442.2174560427666 MULTI CID FTMS 0 0 0 4431 102271.609375 0.7021227000524979 -4 0.154977798461914 3 Unmodified _DANHTGAVV_ ENSG00000132823|ENST00000255174|OSER1 21.53697664764585 0.2571576504437394 4 {[DA]|[EG]}[HN]TGAVV 9 0 + 36.431 0.0 0.0 4.1285 4.1285 74.812 0.0 0.0 0.0 5.545092581168774 20.94608325749168 5.545092581168774 6.47817481888638 0 0.7429928190999391 1.154901959985743 0.4247425010840047 0.3494850021680094 + + {[DA]|[EG]}[HN]TGAVV;{[DA]|[EG]}[HN]TQVV;[HN]{[DA]|[EG]}TGAVV;{[SA]|[TG]}[HN]EGAVV;[HN]{[SA]|[TG]}EGAVV;{[SA]|[TG]}[HQ]DGAVV;[HN][TA]DGAVV;[QT]{[HG]|PP}DGAVV;[HN]{[DA]|[EG]}TQVV;{[SA]|[TG]}[HN]EQVV 4.1285;3.3944;2.8666;2.701;2.5255;2.5015;2.3259;2.1603;2.1325;1.9669 +;-;-;-;-;-;-;-;-;- + 125 1 2.937 63727.7 0.4600000083446502 785 3647 4431 HBL1_DMSO_200M_050219_2,4434 HBL1_DMSO_200M_050219_2,4434,DANHTGAVV False True DANHTGAVV 21.505822 442.217456042767 2588705.5 4431.0 ENSG00000132823|ENST00000255174|OSER1 5.592658042907715 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4436 21.522 800.0 69052.0 25 0 11517.0 + 38043 TPDPPLAPSR 10 81 525.7838106225134 1049.5530683118268 2 525.7843505740166 MULTI CID FTMS 0 0 0 4435 59180.86328125 0.3286327206873463 5 -0.0741329193115234 1 Unmodified _TPDPPLAPSR_ REV__ENSG00000187902|ENST00000376325|SHISA7;REV__ENST00000416792.1_3_19:55944525-55949973:-|nuORF 17.11289562659939 0.5604042439455784 4 ST[{I|L}P][WP]K 7 -1 35.563 0.0 0.0 3.3884 0.0 0.0 222.0993366925797 0.0 222.0993366925797 0.0 25.385825532908584 0.0 0.0 0 1.7302046884880935 0.0 0.8807196863200843 0.0 ST[{I|L}P][WP]K 3.3884 - 88 1 2.937 47588.9 0.4600000083446502 786 3648 4435 HBL1_DMSO_200M_050219_2,4436 HBL1_DMSO_200M_050219_2,4436,TPDPPLAPSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4437 21.536 800.0 131240.0 25 0 26033.0 -1 0 108 457.208043865109 456.200767398509 1 457.2079955935478 MULTI CID FTMS 0 0 0 4435 110841.59375 0.7126830002910464 2 -0.0416336059570312 2 4 {M(Oxidation (M))|F}YQ 3 -1 + 43.742 0.0 0.0 9.5884 9.5884 98.754 0.0 0.0 0.0 13.723637474483468 18.05462187404089 13.723637474483468 43.74220950028501 0 0.25 0.0 0.0 0.805462187404089 {M(Oxidation (M))|F}YQ 9.5884 - 21 + 1 2.937 86156.4 0.4699999988079071 787 3648 4435 HBL1_DMSO_200M_050219_2,4437 HBL1_DMSO_200M_050219_2,4437, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4438 21.543 417.0 237320.0 25 0 15312.0 -1 0 136 332.17867510765063 662.3427972821013 2 332.1780273318291 MULTI CID FTMS 0 0 0 4435 98055.015625 0.1871811510777547 -34 0.6296234130859375 3 4 [MN]GT{I|L}K 6 -1 + 25.632 0.0 0.0 3.87 3.87 64.789 0.0 0.0 0.0 11.028292347832416 0.6766198401553432 0.6766198401553432 0.6766198401553432 0 0.0 1.154901959985743 0.0 0.1643943297944484 [MN]GT{I|L}K;[MN][KA]TV 3.87;3.7678 -;- 77 + 1 2.937 81773.7 1.0 788 3648 4435 HBL1_DMSO_200M_050219_2,4438 HBL1_DMSO_200M_050219_2,4438, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4441 21.564 800.0 166880.0 25 0 12404.0 + 32371 RYQAQHGAL 9 106 522.2723054051747 1042.5300578771494 2 522.2728759646416 MULTI CID FTMS 0 0 0 4440 111315.203125 0.2800325009054452 -18 0.4745903015136719 1 Unmodified _RYQAQHGAL_ ENSG00000105516|ENST00000222122|DBP;ENST00000594723.1_1_19:49134096-49134354:-|nuORF 25.399314129420983 0.2080152500878129 4 AQHGA{I|L} 6 3 42.44 0.0 0.0 4.0709 0.0 0.0 447.2217625488913 0.0 447.2217625488913 0.0 29.737059521965108 0.0 0.0 0 0.6549471895720984 0.0 0.0 0.0 + AQHGA{I|L} 4.0709 + + 197 1 2.937 104307.7 0.4600000083446502 789 3650 4440 HBL1_DMSO_200M_050219_2,4441 HBL1_DMSO_200M_050219_2,4441,RYQAQHGAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4443 21.571 229.0 351620.0 25 0 78781.0 36589 TALVNWVQQ 9 60 529.782948483915 1057.55134403463 2 529.7833129763603 MULTI CID FTMS 0 0 0 4442 335882.0 0.8774259530134643 3 -0.0350570678710937 1 Unmodified _TALVNWVQQ_ CON__P00766 15.847184025352805 0.4077185912009129 4 TA{I|L} 3 6 46.995 0.0 0.0 4.4437 0.0 0.0 0.0 769.3597871428814 769.3597871428814 25.568109453757657 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + TA{I|L} 4.4437 + + 24 + 1 2.937 66949.0 1.0 790 3651 4442 HBL1_DMSO_200M_050219_2,4443 HBL1_DMSO_200M_050219_2,4443,TALVNWVQQ False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 4444 21.576 286.0 294030.0 25 0 34094.0 + 25256 MVPETTHEA 9 83 507.73172809185127 1013.4489032505026 2 507.7316467165947 MULTI CID FTMS 0 0 0 4442 323183.5 0.8980004091500966 -29 0.6293773651123047 2 Unmodified _MVPETTHEA_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 43.85829265575387 0.0542763391141878 4 {[ET]|[MV]}PETTH{[CP]|[EA]} 9 0 + 37.418 0.0 0.0 3.6922 3.6922 75.539 0.0 0.0 0.0 9.397737521010832 5.686814654273682 5.686814654273682 9.0610728786038 0 0.4247425010840047 0.0 1.110924374808178 0.0 + + {[ET]|[MV]}PETTH{[CP]|[EA]};[EP]T{[ET]|[MV]}HAET;[EP]T[HT]{[MS]|[{M(Oxidation (M))|F}A]}[DP];[{M(Oxidation (M))|F}T]AEPT[WY];[YR]HTTH{[CP]|[EA]};[HT]T{[MS]|[{M(Oxidation (M))|F}A]}EP[DP];{[ET]|[MV]}PETHAET;[HT]{[MS]|[{M(Oxidation (M))|F}A]}TEP[DP];[{M(Oxidation (M))|F}T]APET[WY];{[ET]|[MV]}{[MS]|[{M(Oxidation (M))|F}A]}PT[WY] 3.6922;2.7981;2.6262;2.1595;2.1361;2.083;2.0776;1.8376;1.7434;1.7416 +;-;-;-;-;-;-;-;-;- + 453 + 1 2.937 71163.1 1.0 791 3651 4442 HBL1_DMSO_200M_050219_2,4444 HBL1_DMSO_200M_050219_2,4444,MVPETTHEA True True MVPETTHEA 21.575928 507.731646716595 23237724.0 4442.0 nc|ENSG00000100023|Q13356-2|PPIL2;;ENSG00000100023|ENST00000398831|PPIL2 8.420886834462484 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4447 21.585 16.0 3818900.0 25 0 328680.0 28128 PPPLCRPLVSM 11 67 403.887806312762 1208.641589538486 3 403.8878356814384 MULTI CID FTMS 0 0 0 4446 2827934.0 0.6920774917283123 -16 0.4023303985595703 1 Unmodified _PPPLCRPLVSM_ ENSG00000132518|ENST00000254854|GUCY2D 8.745405648335112 0.8338865417133445 4 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 9 40.731 0.0 0.0 3.37 0.0 0.0 0.0 394.2206899978562 394.2206899978562 33.74098423245101 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 3.37 - 90 + 1 2.937 52019.3 1.0 792 3653 4446 HBL1_DMSO_200M_050219_2,4447 HBL1_DMSO_200M_050219_2,4447,PPPLCRPLVSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4448 21.599 800.0 84655.0 25 0 8862.6 + + 13819 ATREAGSAL 9 123 438.23286787484415 874.4511828164883 2 438.2324706912041 MULTI CID FTMS 0 0 0 4446 113653.2890625 0.8695717743563848 -8 0.2002315521240234 2 Unmodified _HTLSFSAI_ ENSG00000145386|ENST00000274026|CCNA2 32.116972079565 0.368454113111938 4 {M(Oxidation (M))|F}SA{I|L} 4 -1 43.22 0.0 0.0 4.9425 0.0 0.0 438.2196522443375 0.0 438.2196522443375 0.0 33.88734177361353 0.0 0.0 0 1.0 0.0 0.7302046884880937 0.0 {M(Oxidation (M))|F}SA{I|L} 4.9425 + + 145 1 2.937 55892.7 0.5 793 3653 4446 HBL1_DMSO_200M_050219_2,4448 HBL1_DMSO_200M_050219_2,4448,HTLSFSAI False False ATREAGSAL 21.598872 438.232470691204 1052923.625 4446.0 ENSG00000145386|ENST00000274026|CCNA2 1.7348470638195674 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4453 21.616 31.0 1901800.0 25 0 359690.0 + 45876 YYRDARSY 8 71 365.17369354753146 1092.4992512427943 3 365.1735107302666 MULTI CID FTMS 0 0 0 4452 1367092.625 0.7584760684973441 9 -0.0756435394287109 1 Unmodified _YYRDARSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 21.53697664764585 0.591232569029014 4 YYRDARSY 8 0 + 65.815 0.0 0.0 6.0242 6.0242 88.127 0.0 0.0 0.0 30.38918066030369 13.11919338094107 13.11919338094107 13.11919338094107 0 0.0 1.3979400086720375 0.0 0.0 + + YYRDARSY;YYRDY[WK];YYRD[WK]Y;YYRW[VG]SY;YY[VG]WRSY;YYRYD[WK];YYR[PG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y 6.0242;4.8234;4.8234;4.5835;4.5835;4.1836;3.5326 +;-;-;-;-;-;- + 151 + 1 2.963 53572.7 1.0 794 3657 4452 HBL1_DMSO_200M_050219_2,4453 HBL1_DMSO_200M_050219_2,4453,YYRDARSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4455 21.62 74.0 1119400.0 25 0 124530.0 + 36605 TAPEDTRRI 9 86 353.5245639637208 1057.5518624913625 3 353.5244323611259 MULTI CID FTMS 0 0 0 4454 902098.1875 0.8973669883104435 8 -0.0708599090576171 1 Unmodified _TAPEDTRRI_ ENSG00000140650|ENST00000268261|PMM2;ENST00000567697.1_1_16:8904837-8941679:+|nuORF 27.628801355627647 0.1796483985696185 4 TA{I|L} 3 6 50.445 0.0 0.0 4.77 0.0 0.0 0.0 769.3600629041564 769.3600629041564 29.01863755803668 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 TA{I|L} 4.77 - 30 + 1 2.963 71381.6 1.0 795 3658 4454 HBL1_DMSO_200M_050219_2,4455 HBL1_DMSO_200M_050219_2,4455,TAPEDTRRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4458 21.637 596.0 123290.0 25 0 40002.0 -1 RFQSSAVM 8 71 471.2290983378242 940.4436437424486 2 471.2301208376884 MULTI CID FTMS 0 0 0 4457 76939.6484375 0.0386084454290351 21 -0.177743911743164 1 Oxidation (M) _RFQSSAVM(Oxidation (M))_ ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7 20.453626601364224 0.6087503291685402 4 AV{M(Oxidation (M))|F} 3 -1 31.682 0.0 0.0 3.3689 0.0 0.0 605.2908802716812 0.0 605.2908802716812 0.0 20.71333751784365 0.0 0.0 0 1.0 0.0 0.0 0.0 AV{M(Oxidation (M))|F} 3.3689 + + 46 1 2.963 60940.8 1.0 796 3660 4457 HBL1_DMSO_200M_050219_2,4458 HBL1_DMSO_200M_050219_2,4458,RFQSSAVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4461 21.658 800.0 96743.0 25 0 7582.6 -1 TATPTIMK 8 111 439.73623268224617 877.4579124312924 2 439.7359496951103 MULTI CID FTMS 0 0 0 4460 70450.953125 0.0644534691930651 -38 0.6868171691894531 1 Oxidation (M) _TATPTIM(Oxidation (M))K_ ENSG00000020577|ENST00000554335|SAMD4A;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 29.081581746732265 0.4323690340403521 4 [TA]TP{I|L}T{M(Oxidation (M))|F}K 8 -1 + 65.374 0.0 0.0 7.4504 7.4504 92.465 0.0 0.0 0.0 50.754886536429 9.751633381116918 9.751633381116918 11.741333424477103 0 1.0 1.6989700043360187 0.7742275032520141 0.1079495689832512 [TA]TP{I|L}T{M(Oxidation (M))|F}K;[TA]TP{I|L}N[YV];[TA]TP{I|L}GG[YV];[TA]T[QP][{M(Oxidation (M))|F}T]{I|L};[TA]G[{I|L}P]{M(Oxidation (M))|F}T[TA];[KT]T{I|L}P{M(Oxidation (M))|F}[TA];[KT]T{I|L}PT{[MS]|[{M(Oxidation (M))|F}A]};[TP][Q{I|L}]{M(Oxidation (M))|F}T[TA];[TP]G[{I|L}A]{M(Oxidation (M))|F}T[TA];[YK][RH]{M(Oxidation (M))|F}K 7.4504;6.1123;5.0567;4.2632;3.095;1.4959;1.1528;0.85936;0.36776;0.24753 -;-;-;-;-;-;-;-;-;- 233 + 1 2.963 63536.4 0.449999988079071 797 3662 4460 HBL1_DMSO_200M_050219_2,4461 HBL1_DMSO_200M_050219_2,4461,TATPTIMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4464 21.678 800.0 123240.0 25 0 23412.0 -1 0 39 1093.3812914142766 3277.12204484303 3 1094.051074206829 MULTI CID FTMS 0 0 0 4463 224595.921875 0.9367041366420076 1 -0.0164051055908203 1 4 D 1 -1 8.9794 0.0 0.0 0.274 0.0 0.0 2350.829827221839 808.2269381158811 3159.05676533772 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 D 0.274 - 11 + 1 2.963 87830.1 0.6299999952316284 798 3664 4463 HBL1_DMSO_200M_050219_2,4464 HBL1_DMSO_200M_050219_2,4464, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4466 21.686 233.0 328870.0 25 0 74493.0 + 45879 YYRDARSY 8 71 547.2565997112993 1092.4986464893984 2 547.2565795779228 MULTI CID FTMS 0 0 0 4465 269725.375 0.4924868359579252 14 -0.1029891967773437 1 Unmodified _YYRDARSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 60.07390631473393 0.1152413078224327 4 YYRDARSY 8 0 + 75.672 0.0 0.0 6.9265 6.9265 92.556 0.0 0.0 0.0 65.63821770260617 14.904630595263413 14.904630595263413 18.404565063028286 0 1.5044321917401078 2.0 0.3807196863200844 0.4247425010840047 + + YYRDARSY;YYRDY[WK];YYRD[WK]Y;YYRW[VG]SY;YYRYD[WK];[HM][{I|L}T]DARSY;[HM]RAD[{I|L}T]SY 6.9265;5.2419;5.2419;5.0281;4.0107;3.5394;2.5797 +;-;-;-;-;-;- + 140 + 1 2.963 65064.3 1.0 799 3665 4465 HBL1_DMSO_200M_050219_2,4466 HBL1_DMSO_200M_050219_2,4466,YYRDARSY True True YYRDARSY 21.686461 547.256579577923 50024537.0 4465.0 ENSG00000159377|ENST00000290541|PSMB4;;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 7.701754570007324 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4468 21.693 212.0 266880.0 25 0 40169.0 + -1 LTGWPLTMK 9 76 531.7842118363815 1061.5538707395629 2 531.7845336794853 MULTI CID FTMS 0 0 0 4467 277300.59375 0.7935202010265949 -23 0.3680343627929687 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 29.081581746732265 0.1611639662936252 4 KTT[PG][HV]MK 9 -1 40.881 0.0 0.0 3.8511 0.0 0.0 63.99792311456845 0.0 63.99792311456845 0.0 27.60984977102048 0.0 0.0 0 1.2302046884880935 0.0 1.3494850021680094 0.2742275032520141 KTT[PG][HV]MK 3.8511 - 147 + 1 2.963 51125.8 1.0 800 3666 4467 HBL1_DMSO_200M_050219_2,4468 HBL1_DMSO_200M_050219_2,4468,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4469 21.707 800.0 201660.0 25 0 10905.0 + 32373 RYQAQHGAL 9 167 348.5176454374405 1042.5311069125214 3 348.5171386599541 MULTI CID FTMS 0 0 0 4467 89350.640625 0.6631265151991302 -5 0.0490798950195312 2 Unmodified _RYQAQHGAL_ ENSG00000105516|ENST00000222122|DBP;ENST00000594723.1_1_19:49134096-49134354:-|nuORF 54.773552608820026 0.0299037012502309 4 [YR]QAQHGA{I|L} 9 0 + 67.273 0.0 0.0 6.4528 6.4528 87.415 0.0 0.0 0.0 2.922152515121226 55.48978939230159 2.922152515121226 9.208187539523747 0 0.6237125054200234 0.0 0.0 1.1861818737241734 + + [YR]QAQHGA{I|L};[YR][AG]AQHGA{I|L};[YR]QA[AG]HGA{I|L};[YR]QAQHQ{I|L};[VP][HN]AQHGA{I|L};[NP][HV]AQHGA{I|L};[YR][AG]A[AG]HGA{I|L};[YR][AG]AQHQ{I|L};[YR]QA[AG]HQ{I|L};[VP][HN]A[AG]HGA{I|L} 6.4528;5.5696;5.5696;5.4662;5.345;5.3035;4.6905;4.5778;4.5778;4.466 +;-;-;-;-;-;-;-;-;- + 584 1 2.963 134771.6 0.3799999952316284 801 3666 4467 HBL1_DMSO_200M_050219_2,4469 HBL1_DMSO_200M_050219_2,4469,RYQAQHGAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4470 21.721 800.0 117100.0 25 0 7146.7 -1 VDEIMMTLK 9 100 556.2725303629564 1110.5305077927128 2 556.2729369997978 MULTI CID FTMS 0 0 0 4467 88507.140625 0.0981398217464457 -19 0.2130565643310547 3 2 Oxidation (M) _VDEIM(Oxidation (M))M(Oxidation (M))TLK_ ENSG00000065882|ENST00000698857|TBC1D1;nc|ENSG00000065882|Q86TI0-2|TBC1D1;nc|ENSG00000065882|Q86TI0|TBC1D1 34.10243960390752 0.1078313939113124 4 [DV]QHVDAAEK 10 -1 + 122.34 0.0 0.0 11.017 11.017 93.471 0.0 0.0 0.0 15.365320089195592 15.365320089195592 15.365320089195592 9.164539485499262 0 3.274227503252014 1.5228787452803376 0.7742275032520141 0.8494850021680094 [DV]QHVDAAEK;[DV][AG]HVDAAEK;[DV]HQVDAAEK;[DV]H[AG]VDAAEK;[HV]DQVDAAEK;[DV]HAAEAAAEK;[DV]QHVD[VS]{[NV]|[RG]};[HV]D[AG]VDAAEK;[DV]HQVD[VS]{[NV]|[RG]};[DV][AG]HVD[VS]{[NV]|[RG]} 11.017;10.192;9.6331;8.5479;7.4466;7.0592;6.628;6.3614;6.3045;5.8028 -;-;-;-;-;-;-;-;-;- 851 + 1 2.963 76059.2 0.4199999868869781 802 3666 4467 HBL1_DMSO_200M_050219_2,4470 HBL1_DMSO_200M_050219_2,4470,VDEIMMTLK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4472 21.727 178.0 394750.0 25 0 39598.0 + -1 TLHCWGPLLL 10 58 605.3281216858676 1208.641690438535 2 605.3284789919853 MULTI CID FTMS 0 0 0 4471 352927.28125 0.8540144301916378 -1 0.0342559814453125 1 Carbamidomethyl (C) _TLHC(Carbamidomethyl (C))WGPLLL_ REV__ENSG00000020129|ENST00000373243|NCDN;REV__nc|ENSG00000020129|Q9UBB6-2|NCDN 10.823927491677226 0.6659270209832991 4 EPPH[VP] 6 -1 39.526 0.0 0.0 3.2703 0.0 0.0 534.3021717755875 0.0 534.3021717755875 0.0 30.061668675368622 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.0 EPPH[VP] 3.2703 - 126 1 2.963 56462.9 1.0 803 3667 4471 HBL1_DMSO_200M_050219_2,4472 HBL1_DMSO_200M_050219_2,4472,TLHCWGPLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4474 21.732 164.0 302240.0 25 0 32997.0 + 117 AAKDPSPSV 9 83 436.229569978089 870.444587022978 2 436.2296630740166 MULTI CID FTMS 0 0 0 4473 423273.9375 0.4622625159951737 22 -0.2439861297607422 1 Unmodified _AAKDPSPSV_ ENSG00000132361|ENST00000651024|CLUH;nc|ENSG00000132361|O75153|CLUH 56.17704186161178 0.0281986971544335 4 AAQD[PS]PS 8 2 32.788 0.0 0.0 3.7668 0.0 0.0 0.0 114.05650507144765 114.05650507144765 4.985521102304894 0.0 0.0 0.0 0 1.5074908058443608 1.3979400086720375 0.6989700043360187 0.0 AAQD[PS]PS 3.7668 - 301 + 1 2.963 41972.8 1.0 804 3668 4473 HBL1_DMSO_200M_050219_2,4474 HBL1_DMSO_200M_050219_2,4474,AAKDPSPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4479 21.757 601.0 82502.0 25 0 17188.0 2718 ATFMDTVV 8 87 442.2170216745062 882.4194904158124 2 442.2167236208916 MULTI CID FTMS 0 0 0 4478 84662.1015625 0.581228590265169 21 -0.2847576141357422 1 Unmodified _ATFMDTVV_ ENSG00000164659|ENST00000450689|ELAPOR2 14.581692164780916 0.6954967302934248 4 {[SA]|[TG]}[HN]EQVV 8 5 {[SA]|[TG]}[HN]EQ + + 19.949 -10.999 -1.6508 2.2607 2.2607 44.809 0.0 0.0 0.0 0.0 10.740312677277188 0.0 0.0 0 0.5 0.0 0.0 0.0 {[SA]|[TG]}[HN]EQVV 2.2607 - 24 + 1 2.963 41521.2 1.0 805 3672 4478 HBL1_DMSO_200M_050219_2,4479 HBL1_DMSO_200M_050219_2,4479,ATFMDTVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4488 21.791 136.0 465920.0 25 0 48268.0 -1 0 109 332.17867510765063 662.3427972821013 2 332.1783630251884 MULTI CID FTMS 0 0 0 4487 490407.15625 0.9361578846175758 -2 0.0078773498535156 1 4 [MN][KA]TV 6 -1 + 37.628 0.0 0.0 5.6811 5.6811 88.843 0.0 0.0 0.0 24.467561133369657 14.692737604564034 14.692737604564034 29.851205051725017 0 0.5866968715561641 1.5228787452803376 0.2887254899964357 0.0 [MN][KA]TV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ANTV;[KA]MNTV 5.6811;1.1742;0.60012 -;-;- 74 + 1 2.963 55167.5 1.0 806 3680 4487 HBL1_DMSO_200M_050219_2,4488 HBL1_DMSO_200M_050219_2,4488, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4489 21.802 668.0 122350.0 25 0 36174.0 23149 LSPVAIEQTSL 11 78 579.3228946598933 1156.6312363865866 2 579.3236572146416 MULTI CID FTMS 0 0 0 4487 86927.6796875 0.0452546865854901 -12 0.0585193634033203 2 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 12.872603262515298 0.7673816944342327 4 [VG]Y 3 10 22.918 0.0 0.0 1.9815 0.0 0.0 0.0 834.4356569886347 834.4356569886347 7.631095921671507 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 [VG]Y 1.9815 - 26 + 1 2.963 70602.4 1.0 807 3680 4487 HBL1_DMSO_200M_050219_2,4489 HBL1_DMSO_200M_050219_2,4489,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4491 21.808 176.0 343670.0 25 0 37522.0 + 32372 RYQAQHGAL 9 58 522.2723054051747 1042.5300578771494 2 522.2729369997978 MULTI CID FTMS 0 0 0 4490 334621.40625 0.8417975857570847 13 -0.2500495910644531 1 Unmodified _RYQAQHGAL_ ENSG00000105516|ENST00000222122|DBP;ENST00000594723.1_1_19:49134096-49134354:-|nuORF 34.10243960390752 0.1078313939113124 4 QHGA{I|L} 5 4 52.875 0.0 0.0 5.0718 0.0 0.0 518.25981337715 0.0 518.25981337715 0.0 36.67735320183944 0.0 0.0 0 1.2614393726401687 0.0 0.0 0.3807196863200844 + QHGA{I|L} 5.0718 + + 165 1 2.963 54981.4 1.0 808 3681 4490 HBL1_DMSO_200M_050219_2,4491 HBL1_DMSO_200M_050219_2,4491,RYQAQHGAL True True RYQAQHGAL 21.808147 522.272936999798 5872064.3125 4490.0 ENSG00000105516|ENST00000222122|DBP;;ENST00000594723.1_1_19:49134096-49134354:-|nuORF 6.183463096618652 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4492 21.813 278.0 260680.0 25 0 32664.0 -1 LQRNRTQSL 9 90 386.5511286272418 1156.6315564819256 3 386.5508911013603 MULTI CID FTMS 0 0 0 4490 137561.890625 0.0626873151413806 -12 0.0696849822998046 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LQRNRTQSL_ ENST00000296953.6_1_5:172483435-172507612:+|nuORF 24.020572477871973 0.2255576514309169 4 SQTS{I|L} 5 -1 50.718 0.0 0.0 4.385 0.0 0.0 622.3665350687579 0.0 622.3665350687579 0.0 28.92999372323452 0.0 0.0 0 0.9247425010840048 0.0 1.305462187404089 0.0 SQTS{I|L} 4.385 - 89 1 2.963 63027.4 1.0 809 3681 4490 HBL1_DMSO_200M_050219_2,4492 HBL1_DMSO_200M_050219_2,4492,LQRNRTQSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4495 21.834 800.0 95476.0 25 0 12204.0 35681 SVELSGYFK 9 115 515.2674004207041 1028.520247908208 2 515.2676879763603 MULTI CID FTMS 0 0 0 4494 77290.9140625 0.7346092541173295 1 -0.0301990509033203 1 Unmodified _SVELSGYFK_ ENST00000478553.1_1_20:4761798-4761861:-|nuORF 26.88365393820708 0.1891292719743517 4 [VS]Y 3 6 28.684 0.0 0.0 2.7889 0.0 0.0 0.0 676.3333026779925 676.3333026779925 0.7525749891599496 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [VS]Y 2.7889 - 718 1 2.963 62444.7 0.5 810 3683 4494 HBL1_DMSO_200M_050219_2,4495 HBL1_DMSO_200M_050219_2,4495,SVELSGYFK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4496 21.847 800.0 211120.0 25 0 9712.7 + 2658 ATDKNDPHL 9 199 337.50179466732897 1009.4835546021868 3 337.5013305544853 MULTI CID FTMS 0 0 0 4494 80453.46875 0.1138111355928891 -12 0.0767803192138671 2 Unmodified _ATDKNDPHL_ ENSG00000167996|ENST00000273550|FTH1;ENST00000394290.3_1_2:27615653-27615842:-|nuORF 14.838274106304384 0.4350285940865338 4 [TA]ANDT 6 5 23.945 0.0 0.0 2.372 0.0 0.0 0.0 433.2210339556584 433.2210339556584 9.23494113144426 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.7614393726401688 0.6109243748081782 [TA]ANDT 2.372 - 269 1 2.963 135413.7 0.3799999952316284 811 3683 4494 HBL1_DMSO_200M_050219_2,4496 HBL1_DMSO_200M_050219_2,4496,ATDKNDPHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4498 21.852 16.0 3827600.0 25 0 385310.0 -1 LSVHEVVEKQ 10 66 403.887806312762 1208.641589538486 3 403.8877746462822 MULTI CID FTMS 0 0 0 4497 2965962.25 0.7258570088767495 15 -0.3174171447753906 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSVHEVVEKQ_ ENST00000342315.8_1_12:113424985-113425036:+|nuORF 5.731851221503515 0.7001233259664787 4 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 -1 40.731 0.0 0.0 3.37 0.0 0.0 0.0 394.2206052795296 394.2206052795296 21.746199743006045 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 3.37 - 107 + 1 2.961 51283.6 1.0 812 3684 4497 HBL1_DMSO_200M_050219_2,4498 HBL1_DMSO_200M_050219_2,4498,LSVHEVVEKQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4499 21.856 201.0 332990.0 25 0 55441.0 + 25257 MVPETTHEA 9 79 507.73172809185127 1013.4489032505026 2 507.7318298220634 MULTI CID FTMS 0 0 0 4497 300503.34375 0.8349811349851466 4 -0.0731925964355468 2 Unmodified _MVPETTHEA_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 36.12702656103203 0.0967173616627612 4 {[ET]|[MV]}PETTH{[CP]|[EA]} 9 0 + 44.491 0.0 0.0 4.3901 4.3901 77.571 0.0 0.0 0.0 30.501896823007822 4.004377006349458 4.004377006349458 8.563696562846701 0 0.3807196863200844 1.0969100130080565 0.6861818737241735 0.0 + + {[ET]|[MV]}PETTH{[CP]|[EA]};{[ET]|[MV]}PET{M(Oxidation (M))|F}[YQ];[EP]TTH{[MS]|[{M(Oxidation (M))|F}A]}[DP];[YR]HTTH{[CP]|[EA]};{[ET]|[MV]}P{[MS]|[{M(Oxidation (M))|F}A]}T[WY];{[ET]|[MV]}{[MS]|[{M(Oxidation (M))|F}A]}PT[WY];[HT]{[MS]|[{M(Oxidation (M))|F}A]}TEP[DP];[TP]ETH{[MS]|[{M(Oxidation (M))|F}A]}[DP];{[YC]|[HE]}TT{[MS]|[{M(Oxidation (M))|F}A]}P[DP];{[YC]|[HE]}TTP{[MS]|[{M(Oxidation (M))|F}A]}[DP] 4.3901;3.5451;2.6494;2.2142;2.1934;1.8177;1.309;1.27;1.1562;0.7805 +;-;-;-;-;-;-;-;-;- + 232 + 1 2.961 56541.3 1.0 813 3684 4497 HBL1_DMSO_200M_050219_2,4499 HBL1_DMSO_200M_050219_2,4499,MVPETTHEA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4500 21.86 225.0 468840.0 25 0 126320.0 -1 0 101 307.68452884897107 0 307.6845580935478 PEAK CID FTMS 0 0 0 4497 166441.75 0.4547399711094663 -9 0.0822029113769531 3 4 A 1 -1 10.727 0.0 0.0 1.7489 0.0 0.0 131.09371684097806 408.19986757446543 539.2935844154435 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.0 A 1.7489 - 17 + 1 2.961 91289.2 1.0 814 3684 4497 HBL1_DMSO_200M_050219_2,4500 HBL1_DMSO_200M_050219_2,4500, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4503 21.881 800.0 74220.0 25 0 7047.3 + 4090 DANNAKAVV 9 104 451.24081169671575 900.4670704602315 2 451.2406799197197 MULTI CID FTMS 0 0 0 4502 58128.06640625 0.5903797536453035 1 -0.0352592468261718 1 Unmodified _DANNAKAVV_ chr11:2386156-2386555|46|12.48|0.34|5.22|+|ENST00000381036|CD81,CD81;ENSG00000110651|ENST00000263645|CD81;ENST00000468153.1_1_11:2416081-2418093:+|nuORF;ENST00000531840.1_1_11:2416360-2416819:+|nuORF 13.90604991867851 0.4602628045680013 4 {[DA]|[EG]}R 3 7 24.437 0.0 0.0 2.7138 0.0 0.0 0.0 555.2737470561877 555.2737470561877 8.952424927286842 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}R 2.7138 - 120 1 2.961 51103.6 0.4900000095367431 815 3686 4502 HBL1_DMSO_200M_050219_2,4503 HBL1_DMSO_200M_050219_2,4503,DANNAKAVV False True DANNAKAVV 21.880758 451.24067991972 531196.5625 4502.0 ENST00000468153.1_1_11:2416081-2418093:+|nuORF;;chr11:2386156-2386555|46|12.48|0.34|5.22|+|ENST00000381036|CD81,CD81;;ENST00000531840.1_1_11:2416360-2416819:+|nuORF;;ENSG00000110651|ENST00000263645|CD81 1.5349533955256145 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4504 21.886 273.0 361840.0 25 0 56832.0 + 45877 YYRDARSY 8 83 365.17369354753146 1092.4992512427943 3 365.1730224490166 MULTI CID FTMS 0 0 0 4502 202927.4375 0.1125860839057927 38 -0.6572341918945312 2 Unmodified _YYRDARSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 27.628801355627647 0.4629596117395134 4 YYRDARSY 8 0 + 68.653 0.0 0.0 6.284 6.284 87.685 0.0 0.0 0.0 29.42008053022313 9.420080530223132 9.420080530223132 9.420080530223132 0 0.0 1.3010299956639813 0.0 0.3807196863200844 + + YYRDARSY;YYRDARYS;YYRD[WK]Y;YY[VG]WRSY;YY[VG]WRYS;YYR[PG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y;Y{[RE]|[WV]}[YG]RSY;Y{[RE]|[WV]}[YG]RYS;Y{[RE]|[WV]}[WR]{[{M(Oxidation (M))|F}H]|[RQ]} 6.284;5.4218;5.0832;4.8432;3.981;3.678;1.4264;0.56415;0.0030928 +;-;-;-;-;-;-;-;- + 168 + 1 2.961 84836.7 1.0 816 3686 4502 HBL1_DMSO_200M_050219_2,4504 HBL1_DMSO_200M_050219_2,4504,YYRDARSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4505 21.9 800.0 141340.0 25 0 19249.0 + 4483 DAYDMRKA 8 129 485.2263109452153 968.4380689572306 2 485.2258178591728 MULTI CID FTMS 0 0 0 4502 109969.71875 0.0533115917679992 -20 0.1779384613037109 3 Unmodified _DAYDMRKA_ ENSG00000173418|ENST00000334982|NAA20 18.1463463914782 0.6428359029697936 4 DAYD 4 4 46.714 0.0 0.0 4.8237 0.0 0.0 0.0 501.2613635172671 501.2613635172671 23.081597033474424 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + DAYD 4.8237 + + 292 + 1 2.961 91216.9 0.5299999713897705 817 3686 4502 HBL1_DMSO_200M_050219_2,4505 HBL1_DMSO_200M_050219_2,4505,DAYDMRKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4507 21.905 110.0 436520.0 25 0 45578.0 -1 TATPTIMK 8 75 439.73623268224617 877.4579124312924 2 439.7362853884697 MULTI CID FTMS 0 0 0 4506 551799.125 0.5048245101928535 -13 0.1382122039794922 1 Oxidation (M) _TATPTIM(Oxidation (M))K_ ENSG00000020577|ENST00000554335|SAMD4A;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 18.1463463914782 0.6428359029697936 4 [TA]TP{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 8 -1 + 56.375 0.0 0.0 6.4248 6.4248 92.23 0.0 0.0 0.0 35.18183162498551 5.484550065040281 5.484550065040281 40.70419139823928 0 1.0 1.6989700043360187 0.0 0.0 [TA]TP{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[TP][{I|L}T]KT{[MS]|[{M(Oxidation (M))|F}A]};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]KT{[MS]|[{M(Oxidation (M))|F}A]};{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}KT{[MS]|[{M(Oxidation (M))|F}A]} 6.4248;1.786;1.0971;0.38095 -;-;-;- 111 + 1 2.961 42944.4 1.0 818 3687 4506 HBL1_DMSO_200M_050219_2,4507 HBL1_DMSO_200M_050219_2,4507,TATPTIMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4508 21.906 54.0 1090000.0 25 0 166580.0 + -1 IQRLETMK 8 61 517.7865515996853 1033.5585502661704 2 517.7870971560478 MULTI CID FTMS 0 0 0 4506 1070240.625 1.0 0 0.0 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 4 T{M(Oxidation (M))|F}K 3 -1 38.94 0.0 0.0 3.7676 0.0 0.0 639.371077735432 0.0 639.371077735432 0.0 14.727342925659102 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.7676 + + 106 1 2.961 52933.6 1.0 819 3687 4506 HBL1_DMSO_200M_050219_2,4508 HBL1_DMSO_200M_050219_2,4508,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4509 21.913 384.0 214350.0 25 0 51545.0 + -1 RFQSSAVM 8 74 470.2241787161403 469.2169022495403 1 471.2296325564384 MULTI CID FTMS 0 0 0 4506 177349.1875 1.0 0 0.0 3 ENSG00000275379|ENST00000616365|H3C11;ENSG00000277775|ENST00000618052|H3C7;ENSG00000197409|ENST00000356476|H3C4;ENSG00000197153|ENST00000359303|H3C12;ENSG00000278828|ENST00000685041|H3C10;ENSG00000203811|ENST00000369158|H3C14;ENSG00000275714|ENST00000613854|H3C1;ENSG00000168148|ENST00000366696|H3-4;nc|ENSG00000273213|Q5TEC6|H3-7;ENSG00000203852|ENST00000403683|H3C15;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENSG00000183598|ENST00000331491|H3C13 4 V{M(Oxidation (M))|F} 2 -1 20.969 0.0 0.0 4.469 0.0 0.0 205.10241491171752 0.0 205.10241491171752 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 V{M(Oxidation (M))|F} 4.469 - 18 + 1 2.961 69538.7 1.0 820 3687 4506 HBL1_DMSO_200M_050219_2,4509 HBL1_DMSO_200M_050219_2,4509, False False RFQSSAVM 21.913057 471.229632556438 18483572.0 4506.0 ENSG00000275379|ENST00000616365|H3C11;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000168148|ENST00000366696|H3-4;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13 5.244871298472087 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4510 21.921 428.0 158900.0 25 0 16958.0 33610 SIPSSDFLCV 10 105 534.2582230957222 0 534.2590209841728 PEAK CID FTMS 0 0 0 4506 176596.921875 0.8518389804525233 -1 0.0352592468261718 4 Unmodified _SIPSSDFLCV_ ENSG00000106804|ENST00000223642|C5 19.256988751693697 0.3042552096208299 4 VHSSSK 6 8 36.892 0.0 0.0 3.4591 0.0 0.0 203.0776139124195 235.0647371881469 438.1423511005664 0.0 0.0 0.0 0.0 0 0.5 0.0 1.4291746928241125 0.0 VHSSSK 3.4591 - 220 + 1 2.961 56979.9 1.0 821 3687 4506 HBL1_DMSO_200M_050219_2,4510 HBL1_DMSO_200M_050219_2,4510,SIPSSDFLCV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4512 21.929 318.0 208190.0 25 0 40225.0 6350 DVPVGHIVH 9 70 486.7651973637981 971.5158417943962 2 486.7651855349541 MULTI CID FTMS 0 0 0 4511 168015.71875 0.9983573952217396 1 -0.0265522003173828 1 Unmodified _DVPVGHIVH_ ENSG00000090857|ENST00000288050|PDPR;ENST00000566802.5_1_16:74366359-74378726:-|nuORF 8.593279151180031 0.6146971463335029 4 DV 2 7 33.979 0.0 0.0 3.4976 0.0 0.0 0.0 754.3974658571631 754.3974658571631 23.494850021680094 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + DV 3.4976 + + 16 + 1 2.961 55688.8 1.0 822 3688 4511 HBL1_DMSO_200M_050219_2,4512 HBL1_DMSO_200M_050219_2,4512,DVPVGHIVH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4513 21.933 235.0 230560.0 25 0 11391.0 + 38406 TRATQTMII 9 92 345.5275315167688 1033.5607651505063 3 345.5267822146416 MULTI CID FTMS 0 0 0 4511 171213.609375 1.0 0 0.0 2 Unmodified _TRATQTMII_ REV__ENST00000464356.6_2_1:156435963-156436056:-|nuORF 8.155526934196011 0.6299788542272896 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 4 -1 18.672 0.0 0.0 1.8066 0.0 0.0 0.0 601.30428032967 601.30428032967 5.046346079154297 0.0 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT 1.8066 + + 108 1 2.961 49909.3 1.0 823 3688 4511 HBL1_DMSO_200M_050219_2,4513 HBL1_DMSO_200M_050219_2,4513,TRATQTMII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4514 21.947 800.0 189860.0 25 0 18183.0 + 13614 HPPPPPRLG 9 126 484.2757677604904 0 484.2775756716728 PEAK CID FTMS 0 0 0 4511 95033.6328125 1.0 0 0.0 3 Unmodified _HPPPPPRLG_ REV__ENSG00000156860|ENST00000356166|FBRS 10.823927491677226 0.3028200641087142 4 PPP 3 -1 19.693 0.0 0.0 2.0375 0.0 0.0 137.05688978449592 535.3016451471311 672.358534931627 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 PPP 2.0375 + + 55 + 1 2.961 120432.1 0.4699999988079071 824 3688 4511 HBL1_DMSO_200M_050219_2,4514 HBL1_DMSO_200M_050219_2,4514,HPPPPPRLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4516 21.953 182.0 332630.0 25 0 49800.0 + -1 LTGWPLTMK 9 76 531.7842118363815 1061.5538707395629 2 531.7845336794853 MULTI CID FTMS 0 0 0 4515 349456.25 1.0 0 0.0 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 29.081581746732265 0.1611639662936252 4 KTT[PG][HV]MK 9 -1 41.634 0.0 0.0 3.9219 0.0 0.0 63.99799616564639 0.0 63.99799616564639 0.0 24.56871547669635 0.0 0.0 0 1.424742501084005 0.0 1.2302046884880935 0.2742275032520141 KTT[PG][HV]MK 3.9219 - 255 + 1 2.961 51952.0 1.0 825 3689 4515 HBL1_DMSO_200M_050219_2,4516 HBL1_DMSO_200M_050219_2,4516,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4517 21.957 185.0 434590.0 25 0 84695.0 + 37413 TLASGIERT 9 85 474.2615532961072 946.5085536590144 2 474.2615234255791 MULTI CID FTMS 0 0 0 4515 307345.75 0.0475235276413013 -8 0.1450729370117187 2 Unmodified _TLASGIERT_ REV__ENSG00000170873|ENST00000518547|MTSS1;REV__nc|ENSG00000170873|O43312-4|MTSS1;REV__nc|ENSG00000170873|O43312-5|MTSS1 30.63653989081413 0.1413794767160703 4 [{I|L}T]AQSVS{[QN]|[E{I|L}]|[KN]} 9 -1 + 76.265 0.0 0.0 8.0575 8.0575 91.967 0.0 0.0 0.0 65.82920470872112 12.504311474114331 12.504311474114331 9.208187539523747 0 0.8494850021680094 2.0 0.3807196863200844 1.110924374808178 [{I|L}T]AQSVS{[QN]|[E{I|L}]|[KN]};[{I|L}T]A[AG]SVS{[QN]|[E{I|L}]|[KN]};[{I|L}T]A[WK]S{[QN]|[E{I|L}]|[KN]};[{I|L}T]A[{M(Oxidation (M))|F}T]QA[VP];[{I|L}T]A[{M(Oxidation (M))|F}T][AG]A[VP];{[VA]|[{I|L}G]}[Y{I|L}]SQA[VP];[{I|L}T]A{[VA]|[{I|L}G]}[YN][VP];[{I|L}T]A[NG][Y{I|L}][VP];{[VA]|[{I|L}G]}[Y{I|L}]S[AG]A[VP];[{I|L}T][Q{I|L}][YN][VP] 8.0575;7.0846;6.0234;5.4128;3.9912;3.7072;2.923;2.6886;2.2856;2.0284 -;-;-;-;-;-;-;-;-;- 229 + 1 2.961 68388.4 1.0 826 3689 4515 HBL1_DMSO_200M_050219_2,4517 HBL1_DMSO_200M_050219_2,4517,TLASGIERT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4518 21.971 800.0 113680.0 25 0 9519.6 + 35047 SQSNMTQKV 9 118 511.7501934684058 1021.4858340036116 2 511.7505370974541 MULTI CID FTMS 0 0 0 4515 99639.2890625 0.4556727769701591 -4 0.0868682861328125 3 Unmodified _SQSNMTQKV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 76.82478488871298 0.0184607444814265 4 {[QS]|[NT]}SNMTQKV 9 0 + 71.434 0.0 0.0 6.9931 6.9931 80.821 0.0 0.0 0.0 18.69666231504993 2.880650184996142 2.880650184996142 2.880650184996142 0 1.1505149978319906 1.154901959985743 0.7614393726401688 0.9247425010840048 + + {[QS]|[NT]}SNMTQKV;{[QS]|[NT]}SNMTQVK;{[QS]|[NT]}SGGMTQKV;{[QS]|[NT]}SNMT[AG]KV;{[QS]|[NT]}SGGMTQVK;{[QS]|[NT]}SNMT[AG]VK;{[QS]|[NT]}SGGMT[AG]KV;{[QS]|[NT]}SGGMT[AG]VK;{[QS]|[NT]}SMN[K{I|L}]{[QS]|[NT]};{[QS]|[NT]}SMGG[K{I|L}]{[QS]|[NT]} 6.9931;6.7111;6.0917;6.0917;5.8097;5.8097;5.1945;4.9125;4.4341;3.5327 +;-;-;-;-;-;-;-;-;- + 686 + 1 2.961 72874.1 0.4799999892711639 827 3689 4515 HBL1_DMSO_200M_050219_2,4518 HBL1_DMSO_200M_050219_2,4518,SQSNMTQKV True True SQSNMTQKV 21.970707 511.750537097454 872212.5625 4515.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 7.111932436625163 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4520 21.975 103.0 539760.0 25 0 34423.0 + 30073 QVDHADGLEK 10 75 556.2725303629564 1110.5305077927128 2 556.2728149294853 MULTI CID FTMS 0 0 0 4519 612898.75 0.6796036302705877 5 -0.09954833984375 1 Unmodified _QVDHADGLEK_ REV__ENSG00000163492|ENST00000443758|CCDC141;REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141 32.037481411007896 0.2488723560272515 4 [DV]HQVDAAEK 10 -1 + 102.53 0.0 0.0 9.2328 9.2328 82.228 0.0 0.0 0.0 15.462863450913304 33.83060513844539 15.462863450913304 1.2500612294595896 0 2.9247425010840047 1.5228787452803376 0.2887254899964357 0.3054621874040891 [DV]HQVDAAEK;[DV]HAGVDAAEK;[DV]HAAEAAAEK;[DV]HQVD[VS]{[NV]|[RG]};[DV]HAGVD[VS]{[NV]|[RG]};[DV]HQV[TA]E{[NV]|[RG]};[DV]HAAE{[NV]|[RG]}EK;[DV]HAGV[TA]E{[NV]|[RG]};[DV]HAAEA[VS]{[NV]|[RG]};[DV]HAAEKE{[NV]|[RG]} 9.2328;9.1203;7.6316;5.9324;5.8198;5.0525;4.9927;4.9399;4.3311;4.2765 -;-;-;-;-;-;-;-;-;- 764 1 2.961 48437.5 1.0 828 3690 4519 HBL1_DMSO_200M_050219_2,4520 HBL1_DMSO_200M_050219_2,4520,QVDHADGLEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4521 21.985 536.0 116410.0 25 0 9767.3 + 41536 VPNTSQSQV 9 102 480.243378171086 958.472203408972 2 480.2434570193291 MULTI CID FTMS 0 0 0 4519 132828.71875 0.4617680973066672 -9 0.1685352325439453 2 Unmodified _VPNTSQSQV_ ENSG00000103064|ENST00000219343|SLC7A6 41.8396318013385 0.0653578398400075 4 [AG]SPVSQSQV 10 5 + 56.324 0.0 0.0 5.8764 5.8764 84.428 0.0 0.0 0.0 11.480625354554377 8.507112333562858 8.507112333562858 9.164539485499256 0 0.2742275032520141 1.3979400086720375 1.924742501084005 0.0 [AG]SPVSQSQV;[AG]SPVS[AG]SQV;{[QS]|[NT]}PVSQSQV;[AG]SP{[QS]|[NT]}VSQV;[NP]TVSQSQV;{[QS]|[NT]}PVS[AG]SQV;[VP]NTSQSQV;[AG]V[PS]SQSQV;[NP]S{I|L}SQSQV;{[QS]|[NT]}P{[QS]|[NT]}VSQV 5.8764;4.9202;4.6786;4.0665;3.7716;3.7179;3.4487;3.3718;3.1182;2.8687 -;-;-;-;-;-;+;-;-;- + 879 1 2.961 50414.3 1.0 829 3690 4519 HBL1_DMSO_200M_050219_2,4521 HBL1_DMSO_200M_050219_2,4521,VPNTSQSQV True True VPNTSQSQV 21.984909 480.243457019329 3265373.5 4519.0 ENSG00000103064|ENST00000219343|SLC7A6 0.840792735417684 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4522 21.999 800.0 179780.0 25 0 27093.0 -1 0 55 931.9275337940584 1861.840514654917 2 931.9316284060478 MULTI CID FTMS 0 0 0 4519 109631.28125 0.28714007032728 -7 0.1534061431884765 3 4 E 1 -1 6.9897 0.0 0.0 0.37542 0.0 0.0 1367.6660894613606 362.1090487115844 1729.775138172945 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.37542 - 4 + 1 2.961 102911.5 1.0 830 3690 4519 HBL1_DMSO_200M_050219_2,4522 HBL1_DMSO_200M_050219_2,4522, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4524 22.015 800.0 156880.0 25 0 15250.0 + -1 TIHIFRIMY 9 95 605.3281216858676 1208.641690438535 2 605.3281127810478 MULTI CID FTMS 0 0 0 4523 109058.6875 0.263900519486294 23 -0.4542579650878906 1 Oxidation (M) _TIHIFRIM(Oxidation (M))Y_ REV__ENST00000316660.6_1_18:57570359-57570470:+|nuORF 15.847184025352805 0.4077185912009129 4 [{I|L}T]HPPEH 7 -1 40.278 0.0 0.0 3.3325 0.0 0.0 0.0 394.2216280572876 394.2216280572876 32.31894134698493 0.0 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.0 [{I|L}T]HPPEH 3.3325 - 271 + 1 2.961 93564.0 0.6100000143051147 831 3691 4523 HBL1_DMSO_200M_050219_2,4524 HBL1_DMSO_200M_050219_2,4524,TIHIFRIMY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4525 22.02 278.0 236200.0 25 0 25344.0 + 2659 ATDKNDPHL 9 101 505.74862480407927 1009.4826966749586 2 505.7491638064384 MULTI CID FTMS 0 0 0 4523 189646.9375 0.6563629886110184 -6 0.1383819580078125 2 Unmodified _ATDKNDPHL_ ENSG00000167996|ENST00000273550|FTH1;ENST00000394290.3_1_2:27615653-27615842:-|nuORF 53.40400417844725 0.0329064971918313 4 [TA]ANDTAP[H{I|L}] 10 4 + 55.526 0.0 0.0 5.5004 5.5004 82.245 0.0 0.0 0.0 12.201405842874358 7.269987279362624 7.269987279362624 8.776362525516532 0 1.3494850021680094 1.3010299956639813 0.9349821530037312 0.3807196863200844 [TA]ANDTAP[H{I|L}];[TA]A[TA]NDP[H{I|L}];[TA]DKND{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[TA]AGGDTAP[H{I|L}];[TA]DKNDP[H{I|L}];[TA]AN[TA]DP[H{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}NDTAP[H{I|L}];[TA]A[TA]GGDP[H{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}[TA]NDP[H{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}GGDTAP[H{I|L}] 5.5004;4.631;4.2917;4.2154;4.1692;4.1104;3.915;3.346;3.0456;3.0028 -;-;-;-;+;-;-;-;-;- + 381 1 2.961 54697.4 1.0 832 3691 4523 HBL1_DMSO_200M_050219_2,4525 HBL1_DMSO_200M_050219_2,4525,ATDKNDPHL True True ATDKNDPHL 22.020242 505.749163806438 14672648.25 4523.0 ENST00000394290.3_1_2:27615653-27615842:-|nuORF;;ENSG00000167996|ENST00000273550|FTH1 6.399236043294271 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4526 22.025 265.0 291090.0 25 0 17421.0 + + 37044 DAYDMRKA 8 110 323.820631531899 968.440065195897 3 323.8200866580009 MULTI CID FTMS 0 0 0 4523 156970.171875 1.0 0 0.0 3 Unmodified _TGCLRTSTM_ ENSG00000173418|ENST00000334982|NAA20 15.847184025352805 0.4077185912009129 4 {[DA]|[EG]}YDA 5 -1 39.253 0.0 0.0 4.0532 0.0 0.0 0.0 430.2222078912719 430.2222078912719 25.27310937020445 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {[DA]|[EG]}YDA 4.0532 - 62 + 1 2.961 67835.3 1.0 833 3691 4523 HBL1_DMSO_200M_050219_2,4526 HBL1_DMSO_200M_050219_2,4526,TGCLRTSTM False False DAYDMRKA 22.02514 323.820086658001 788016.25 4523.0 ENSG00000173418|ENST00000334982|NAA20 1.869249661763509 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4529 22.038 378.0 290200.0 25 0 36108.0 + 25647 NFSHGTHEY 9 131 364.4897886519621 1090.4475365560863 3 364.4893066287041 MULTI CID FTMS 0 0 0 4528 143631.296875 0.0456518091308832 -9 0.1816272735595703 1 Unmodified _NFSHGTHEY_ ENSG00000067225|ENST00000335181|PKM;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;ENST00000564276.1_1_15:72502555-72511438:-|nuORF;nc|ENSG00000067225|P14618-2|PKM 28.486842064014134 0.1687311288560894 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y[MT]AAQ 8 6 38.893 0.0 0.0 3.5667 0.0 0.0 0.0 161.02504907779533 161.02504907779533 23.737577350063788 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.8807196863200843 0.3252574989159953 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y[MT]AAQ 3.5667 - 236 + 1 2.958 89701.6 1.0 834 3693 4528 HBL1_DMSO_200M_050219_2,4529 HBL1_DMSO_200M_050219_2,4529,NFSHGTHEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4530 22.052 800.0 161620.0 25 0 9077.5 + 25649 NFSHGTHEY 9 133 546.2307155774728 1090.4468782217457 2 546.2311279177666 MULTI CID FTMS 0 0 0 4528 112776.796875 0.0403024761639801 -10 0.2118263244628906 2 Unmodified _NFSHGTHEY_ ENSG00000067225|ENST00000335181|PKM;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;ENST00000564276.1_1_15:72502555-72511438:-|nuORF;nc|ENSG00000067225|P14618-2|PKM 122.17920374332846 0.0007092405233684 4 N{M(Oxidation (M))|F}SHGT[YE]H 9 2 + 59.277 0.0 0.0 5.4361 5.4361 77.248 0.0 0.0 0.0 0.6926422216950243 2.6760624017703165 0.6926422216950243 4.107529589480613 0 1.110924374808178 1.0 0.5649093276264391 0.0 N{M(Oxidation (M))|F}SHGT[YE]H;N{M(Oxidation (M))|F}SHGT{[DA]|[EG]}{[QD]|[EN]|[WG]|[KD]|[RS]};N{M(Oxidation (M))|F}SH[HA]SEY;N{M(Oxidation (M))|F}SHG{[CP]|[EA]}S{[QD]|[EN]|[WG]|[KD]|[RS]};[HS]AHS{M(Oxidation (M))|F}NEY;[HT]GHS{M(Oxidation (M))|F}NEY;{[HG]|PP}THS{M(Oxidation (M))|F}NEY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NG]PNHEY;[HS]AEHSN{M(Oxidation (M))|F}Y;YANHGT{[DA]|[EG]}{[QD]|[EN]|[WG]|[KD]|[RS]} 5.4361;5.0594;5.0251;4.4382;4.3804;3.578;3.536;3.4437;3.3435;3.2943 -;-;-;-;-;-;-;-;-;- 3844 + 1 2.958 98145.5 0.5899999737739563 835 3693 4528 HBL1_DMSO_200M_050219_2,4530 HBL1_DMSO_200M_050219_2,4530,NFSHGTHEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4532 22.057 35.0 1921300.0 25 0 686310.0 + 19429 LEVQDLIQLS 10 56 579.3228946598933 1156.6312363865866 2 579.3231689333916 MULTI CID FTMS 0 0 0 4531 1779594.625 0.926459757043056 2 -0.0492134094238281 1 Unmodified _LEVQDLIQLS_ REV__ENSG00000119535|ENST00000373106|CSF3R;REV__nc|ENSG00000119535|Q99062-2|CSF3R;REV__nc|ENSG00000119535|Q99062-3|CSF3R;REV__nc|ENSG00000119535|Q99062-4|CSF3R 11.494710602746466 0.654671931888957 4 RP 2 -1 23.698 0.0 0.0 2.0489 0.0 0.0 0.0 900.4505098932249 900.4505098932249 10.994850021680094 0.0 0.0 0.0 0 0.75 0.0 0.0 0.0 RP 2.0489 - 23 + 1 2.958 58910.1 1.0 836 3694 4531 HBL1_DMSO_200M_050219_2,4532 HBL1_DMSO_200M_050219_2,4532,LEVQDLIQLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4533 22.06 136.0 595090.0 25 0 60075.0 + 16642 KEKELGKAK 9 95 515.8161656526202 1029.6177783720402 2 515.8166992068291 MULTI CID FTMS 0 0 0 4531 595982.1875 0.1314369648842201 -8 0.1878166198730468 2 Unmodified _KEKELGKAK_ ENSG00000178202|ENST00000323468|POGLUT3;nc|ENSG00000178202|Q7Z4H8-2|POGLUT3;nc|ENSG00000178202|Q7Z4H8-3|POGLUT3 36.506200033944 0.094635877243972 4 KT{I|L}QTQ{I|L}AK 9 6 + 94.937 0.0 0.0 9.2206 9.2206 93.507 0.0 0.0 0.0 76.99146580189776 17.14719041932895 17.14719041932895 9.208187539523747 0 2.2658715643802765 0.0 0.3807196863200844 1.066901560044258 KT{I|L}QTQ{I|L}AK;KT{I|L}[AG]TQ{I|L}AK;KT{I|L}QT[AG]{I|L}AK;KT{I|L}[AG]T[AG]{I|L}AK;[KT][KT]TQ[VP]K;[KT]{I|L}[SG]{[NV]|[RG]}{I|L}AK;[KT]{I|L}[DG][KG]{I|L}AK;[KT]{I|L}[SG][TP]KAK;[KT]{I|L}[DG]{[VA]|[{I|L}G]}KAK;[KT][KT][EP]KAK 9.2206;8.3263;8.3263;7.4362;3.4519;3.081;2.9223;2.7924;2.6338;2.6269 -;-;-;-;-;-;-;-;-;- 703 + 1 2.958 64844.7 1.0 837 3694 4531 HBL1_DMSO_200M_050219_2,4533 HBL1_DMSO_200M_050219_2,4533,KEKELGKAK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4534 22.07 582.0 280000.0 25 0 14400.0 + 23446 LTFLPPSKK 9 187 344.21383589875995 1029.6196782964798 3 344.2141906619072 MULTI CID FTMS 0 0 0 4531 109197.4765625 0.1266774620274227 -6 0.1315288543701172 3 Unmodified _LTFLPPSKK_ ENSG00000165186|ENST00000379361|PTCHD1;nc|ENSG00000165186|Q96NR3-2|PTCHD1 42.09456458481378 0.0639583784996157 4 [{I|L}T]KQTQ{I|L}AK 9 6 [{I|L}T]KQ + + 40.182 28.193 5.9948 3.9026 3.9026 48.379 0.0 0.0 0.0 0.0 11.98945184671841 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.9876954943324544 [{I|L}T]KQTQ{I|L}AK 3.9026 - 488 + 1 2.958 128777.9 1.0 838 3694 4531 HBL1_DMSO_200M_050219_2,4534 HBL1_DMSO_200M_050219_2,4534,LTFLPPSKK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4536 22.075 28.0 1861200.0 25 0 107780.0 23150 LSPVAIEQTSL 11 78 386.5511286272418 1156.6315564819256 3 386.5510131716728 MULTI CID FTMS 0 0 0 4535 1751071.5 0.7979678852686606 2 -0.0638065338134765 1 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 15.248480904072842 0.7179608125786238 4 [{M(Oxidation (M))|F}V]T 3 9 25.942 0.0 0.0 2.2429 0.0 0.0 0.0 806.4393736914932 806.4393736914932 1.0771841425634676 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]T 2.2429 - 21 + 1 2.958 46584.7 1.0 839 3695 4535 HBL1_DMSO_200M_050219_2,4536 HBL1_DMSO_200M_050219_2,4536,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4537 22.089 800.0 99431.0 25 0 5793.3 + 18516 KYQEQHSVM 9 111 575.2707665862645 1148.5269802393289 2 575.2691528201103 MULTI CID FTMS 0 0 0 4535 97999.6328125 0.6396970097214523 -6 0.1230106353759765 2 Unmodified _KYQEQHSVM_ ENSG00000162735|ENST00000368072|PEX19 66.45667989310934 0.0225072657982126 4 [VS][SG]{M(Oxidation (M))|F}[QA]HSVM 11 6 + 52.563 0.0 0.0 4.5765 4.5765 72.905 0.0 0.0 0.0 3.774463394305961 15.070623213458036 3.774463394305961 3.5654732351381284 0 1.0189301784845295 1.2218487496163564 1.0 0.4247425010840047 [VS][SG]{M(Oxidation (M))|F}[QA]HSVM;[VS][YQ][QA]HSVM;[VS]{[ES]|[DT]|[{I|L}C]}HHHSVM;[YK]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HSVM;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Q{[CA]|SS}[PG]SVM;[QT]T{M(Oxidation (M))|F}[QA]HSVM;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Q{[CA]|SS}[Q{I|L}]VM;[VS][SG]P{M(Oxidation (M))|F}YYVM;[QT]{M(Oxidation (M))|F}T[QA]HSVM;[{M(Oxidation (M))|F}T]QT[QA]HSVM 4.5765;4.2661;4.2582;4.2479;4.1776;3.9902;3.605;3.605;3.5165;3.5054 -;-;-;+;-;-;-;-;-;- + 758 1 2.958 64161.0 0.4699999988079071 840 3695 4535 HBL1_DMSO_200M_050219_2,4537 HBL1_DMSO_200M_050219_2,4537,KYQEQHSVM True True KYQEQHSVM 22.089208 575.26915282011 728725.8125 4535.0 ENSG00000162735|ENST00000368072|PEX19 7.387988090515137 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4538 22.102 710.0 47308.0 25 0 7803.3 -1 0 47 753.3159299030137 2256.925960309241 3 753.6498901247978 MULTI CID FTMS 0 0 0 4535 89224.71875 1.0 0 0.0 3 4 ASQ 3 -1 25.049 0.0 0.0 1.1099 0.0 0.0 1261.5300921902706 706.2428072565061 1967.7728994467768 0.0 0.0 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 ASQ 1.1099 - 84 + 1 2.958 35612.1 1.0 841 3695 4535 HBL1_DMSO_200M_050219_2,4538 HBL1_DMSO_200M_050219_2,4538, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4540 22.106 88.0 656880.0 25 0 49376.0 + 5262 DKNRYSLD 8 91 337.50179466732897 1009.4835546021868 3 337.5014221072197 MULTI CID FTMS 0 0 0 4539 662979.5 0.9378644692657314 1 -0.0326271057128906 1 Unmodified _DKNRYSLD_ REV__ENSG00000101605|ENST00000356443|MYOM1;REV__nc|ENSG00000101605|P52179-2|MYOM1 12.531546534597751 0.7257836412119636 4 [TA]ANDT 6 -1 28.945 0.0 0.0 2.8673 0.0 0.0 0.0 433.2200581052121 433.2200581052121 11.536757287974662 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.9489700043360187 0.25 [TA]ANDT 2.8673 - 216 1 2.958 53355.7 1.0 842 3696 4539 HBL1_DMSO_200M_050219_2,4540 HBL1_DMSO_200M_050219_2,4540,DKNRYSLD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4541 22.12 800.0 157120.0 25 0 14014.0 + 34768 SQAPSTMQV 9 148 482.7236594732528 963.4327660133056 2 482.7240173220634 MULTI CID FTMS 0 0 0 4539 118572.5703125 0.3116279378232691 -9 0.2017707824707031 2 Oxidation (M) _SQAPSTM(Oxidation (M))QV_ ENSG00000112658|ENST00000265354|SRF 47.74868867922204 0.0453060283459952 4 {[QS]|[NT]}A[VP]MA 7 4 35.634 0.0 0.0 3.6987 0.0 0.0 0.0 276.06976487488697 276.06976487488697 1.689669152281752 0.0 0.0 0.0 0 0.805462187404089 0.638272163982407 0.4090970050269639 0.5010912013506126 {[QS]|[NT]}A[VP]MA 3.6987 - 1005 1 2.958 98454.2 0.5199999809265137 843 3696 4539 HBL1_DMSO_200M_050219_2,4541 HBL1_DMSO_200M_050219_2,4541,SQAPSTMQV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4542 22.134 800.0 93121.0 25 0 9228.3 + 35513 STMSTNGIPR 10 105 540.2609941854893 1078.5074354377784 2 540.2614013552666 MULTI CID FTMS 0 0 0 4539 112132.9453125 0.016174042333755 -45 0.5376052856445312 3 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 53.40400417844725 0.0601721406801337 4 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 72.428 0.0 0.0 6.7156 6.7156 76.463 0.0 0.0 0.0 7.269987279362624 0.9691001300805624 0.9691001300805624 0.9691001300805624 0 0.9247425010840048 0.0 0.4247425010840047 0.3807196863200844 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV][HV]T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 6.7156;6.6257;5.8658;5.776;0.57289 -;+;-;-;- + 266 + 1 2.958 60144.8 0.5199999809265137 844 3696 4539 HBL1_DMSO_200M_050219_2,4542 HBL1_DMSO_200M_050219_2,4542,STMSTNGIPR True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4544 22.139 49.0 1390900.0 25 0 129900.0 16027 ITHGKDISELP 11 74 403.887806312762 1208.641589538486 3 403.8877441287041 MULTI CID FTMS 0 0 0 4543 1188469.75 0.290853026829825 28 -0.4147987365722656 1 Unmodified _ITHGKDISELP_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 8.745405648335112 0.8338865417133445 4 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 7 9 40.858 0.0 0.0 3.3805 0.0 0.0 0.0 266.1625155084594 266.1625155084594 29.26431947294404 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHQ 3.3805 - 193 + 1 2.958 60027.5 1.0 845 3697 4543 HBL1_DMSO_200M_050219_2,4544 HBL1_DMSO_200M_050219_2,4544,ITHGKDISELP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4545 22.143 204.0 637290.0 25 0 122020.0 -1 0 115 307.68452884897107 0 307.6846191287041 PEAK CID FTMS 0 0 0 4543 180329.75 0.4926837485497315 4 -0.0386962890625 2 4 A 1 -1 7.7866 0.0 0.0 1.2695 0.0 0.0 131.09317105624712 408.2017306104032 539.2949016666503 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 A 1.2695 - 5 + 1 2.958 107917.7 1.0 846 3697 4543 HBL1_DMSO_200M_050219_2,4545 HBL1_DMSO_200M_050219_2,4545, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4546 22.157 800.0 70018.0 25 0 3639.8 + -1 TMSTNGIPR 9 103 496.7453514493971 991.4761499655942 2 496.7447082400322 MULTI CID FTMS 0 0 0 4543 88999.9140625 0.9689610646878248 -6 0.1353034973144531 3 Oxidation (M) _TM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 20.41453444215458 0.284085796332423 4 [{M(Oxidation (M))|F}T]STN{[VA]|[{I|L}G]}RP 9 -1 + 40.646 0.0 0.0 4.0996 4.0996 67.307 0.0 0.0 0.0 7.147642715192504 1.6840443038938986 1.6840443038938986 1.6840443038938986 0 0.805462187404089 0.0 0.0 0.3494850021680094 [{M(Oxidation (M))|F}T]STN{[VA]|[{I|L}G]}RP;[{M(Oxidation (M))|F}T]STN{[VA]|[{I|L}G]}PR;[{M(Oxidation (M))|F}T]STGG{[VA]|[{I|L}G]}RP;[VG][PS][KS]TS{[ET]|[MV]};[{M(Oxidation (M))|F}T]STGG{[VA]|[{I|L}G]}PR;[PS][VG][KS]TS{[ET]|[MV]};[{M(Oxidation (M))|F}T]STN{[NV]|[RG]}{I|L}P;[VG][PS]T[KS]S{[ET]|[MV]};[PS][VG]T[KS]S{[ET]|[MV]};[VP][SG][KS]TS{[ET]|[MV]} 4.0996;3.9297;3.1708;3.1456;3.001;2.9596;2.8362;2.5384;2.3523;2.0695 -;+;-;-;-;-;-;-;-;- + 179 + 1 2.958 47549.3 0.4699999988079071 847 3697 4543 HBL1_DMSO_200M_050219_2,4546 HBL1_DMSO_200M_050219_2,4546,TMSTNGIPR False False TMSTNGIPR 22.156541 496.744708240032 815513.3125 4543.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 7.94361686706543 2.0 True 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4548 22.161 45.0 967360.0 25 0 69883.0 + -1 APMSNPHTV 9 78 485.2263109452153 968.4380689572306 2 485.2266113162041 MULTI CID FTMS 0 0 0 4547 1317970.75 0.6389315111907908 -8 0.1856307983398437 1 Oxidation (M) _APM(Oxidation (M))SNPHTV_ REV__ENSG00000068697|ENST00000175091|LAPTM4A 19.256988751693697 0.3154191944385105 4 [PS]A{M(Oxidation (M))|F}PHNS{I|L} 9 -1 + 50.155 0.0 0.0 5.179 5.179 82.242 0.0 0.0 0.0 25.515384402724592 6.923487412610356 6.923487412610356 9.208187539523747 0 1.742992819099939 2.0 0.6861818737241735 0.0 [PS]A{M(Oxidation (M))|F}PHNS{I|L};[PS]A{M(Oxidation (M))|F}PHGGS{I|L};[PS][WE]HNS{I|L};[PS][WE]HGGS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[C(Carbamidomethyl (C))K]NS{I|L};[PS]{[WN]|[YH]}{[YC]|[HE]}S{I|L};[PS][DP][RP][WD];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GG[C(Carbamidomethyl (C))K]NS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[C(Carbamidomethyl (C))K]GGS{I|L};[NS][KC]{[CT]|[{M(Oxidation (M))|F}G]}NS{I|L} 5.179;4.2282;3.3043;2.3479;2.1762;1.9253;1.2548;1.2198;1.2198;0.85626 -;-;-;-;-;-;-;-;-;- 238 + 1 2.958 36924.5 1.0 848 3698 4547 HBL1_DMSO_200M_050219_2,4548 HBL1_DMSO_200M_050219_2,4548,APMSNPHTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4549 22.163 61.0 792010.0 25 0 87288.0 + + 2794 TATPTIMK 8 70 439.73623268224617 877.4579124312924 2 439.7366821169853 MULTI CID FTMS 0 0 0 4547 836726.875 0.7654963839188255 -2 0.0549030303955078 2 Unmodified _ATTWVTVT_ ENSG00000020577|ENST00000554335|SAMD4A;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 23.1484247019978 0.5573009939494978 4 [TA]TP{I|L}T{M(Oxidation (M))|F}K 8 -1 [TA] + + 40.623 22.218 12.911 4.6296 4.6296 51.014 0.0 0.0 0.0 0.0 7.257724967479859 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 [TA]TP{I|L}T{M(Oxidation (M))|F}K 4.6296 - 132 + 1 2.958 42647.6 1.0 849 3698 4547 HBL1_DMSO_200M_050219_2,4549 HBL1_DMSO_200M_050219_2,4549,ATTWVTVT False False TATPTIMK 22.16262 439.736682116985 50403676.0 4547.0 ENSG00000020577|ENST00000554335|SAMD4A;;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 3.636880318323771 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4550 22.165 124.0 496430.0 25 0 34683.0 + 3054 AVLGHAAEK 9 89 448.2533584747519 894.4921640163037 2 448.2533752322197 MULTI CID FTMS 0 0 0 4547 513044.71875 0.96413666667528 -2 0.0549030303955078 3 Unmodified _AVLGHAAEK_ ENSG00000162600|ENST00000371226|OMA1;nc|ENSG00000162600|Q96E52-2|OMA1 32.30548876998284 0.1201446275138228 4 [HV][Q{I|L}]AAEK 8 3 + 42.686 0.0 0.0 4.7721 4.7721 76.416 0.0 0.0 0.0 5.474469367710746 25.52887198244136 5.474469367710746 5.757907631886518 0 1.305462187404089 1.154901959985743 0.0 0.0 [HV][Q{I|L}]AAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YK]AEK;[HV]D[NG]{I|L}{I|L}K 4.7721;4.1284;1.7798 -;-;- 99 1 2.958 53387.4 1.0 850 3698 4547 HBL1_DMSO_200M_050219_2,4550 HBL1_DMSO_200M_050219_2,4550,AVLGHAAEK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4554 22.189 800.0 161490.0 25 0 14791.0 + 2981 AVIEHTNRV 9 151 346.861376953804 0 346.8618957400322 PEAK CID FTMS 0 0 0 4553 71037.8515625 0.7621976545572158 1 -0.0437641143798828 1 Unmodified _AVIEHTNRV_ ENSG00000198380|ENST00000357308|GFPT1;nc|ENSG00000198380|Q06210-2|GFPT1 33.4449034751529 0.0939430949041602 4 H 1 8 6.9897 0.0 0.0 1.0105 0.0 0.0 66.37767040888839 485.2482693008304 551.6259397097188 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 1.0105 + + 31 + 1 2.958 109737.3 0.6000000238418579 851 3701 4553 HBL1_DMSO_200M_050219_2,4554 HBL1_DMSO_200M_050219_2,4554,AVIEHTNRV True True AVIEHTNRV 22.189114 346.861895740032 361996.8125 4553.0 ENSG00000198380|ENST00000357308|GFPT1;;nc|ENSG00000198380|Q06210-2|GFPT1 5.904056708017985 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4555 22.203 800.0 180440.0 25 0 77649.0 + 27090 PFDRISLQ 8 109 488.2676499955664 0 488.2678710818291 PEAK CID FTMS 0 0 0 4553 141313.671875 0.7851901209594276 4 -0.1263065338134765 2 Unmodified _PFDRISLQ_ REV__ENSG00000011451|ENST00000673675|WIZ;REV__nc|ENSG00000011451|O95785|WIZ 14.581692164780916 0.4900557725783909 4 D 1 -1 4.3361 0.0 0.0 0.44494 0.0 0.0 774.4044731094939 82.06696497134999 856.4714380808439 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 D 0.44494 + + 53 + 1 2.958 113782.4 0.800000011920929 852 3701 4553 HBL1_DMSO_200M_050219_2,4555 HBL1_DMSO_200M_050219_2,4555,PFDRISLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4556 22.217 800.0 188540.0 25 0 67139.0 -1 0 104 502.28320482691936 501.27592836031937 1 502.2820617556572 MULTI CID FTMS 0 0 0 4553 106251.296875 0.7012778467072778 -8 0.1436309814453125 3 4 P 1 -1 11.259 0.0 0.0 2.2461 0.0 0.0 386.2121064992826 0.0 386.2121064992826 0.0 8.784809756568528 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.2461 - 10 + 1 2.958 120996.1 0.7200000286102295 853 3701 4553 HBL1_DMSO_200M_050219_2,4556 HBL1_DMSO_200M_050219_2,4556, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4558 22.221 15.0 3038500.0 25 0 833980.0 + 15946 ITAKDSAKN 9 66 474.2615532961072 946.5085536590144 2 474.2616454958916 MULTI CID FTMS 0 0 0 4557 3935903.5 0.6085915252634685 5 -0.1386585235595703 1 Unmodified _ITAKDSAKN_ REV__ENSG00000108469|ENST00000317905|RECQL5;REV__nc|ENSG00000108469|O94762-2|RECQL5;REV__nc|ENSG00000108469|O94762-3|RECQL5;REV__nc|ENSG00000108469|O94762-4|RECQL5 13.042465956692816 0.4836390050082244 4 [{I|L}T]AQSVSNK 9 -1 + 71.687 0.0 0.0 7.5738 7.5738 91.565 0.0 0.0 0.0 59.90411161306336 10.088422267289133 10.088422267289133 9.208187539523756 0 0.9247425010840048 2.0 0.0 0.0 [{I|L}T]AQSVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSNK;[{I|L}T]A[AG]SVSGGK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVSQA[VP];[{I|L}T]A[{M(Oxidation (M))|F}T]QA[VP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVS[AG]A[VP];[{I|L}T]A[{M(Oxidation (M))|F}T][AG]A[VP] 7.5738;6.601;6.601;5.6327;4.8981;4.5571;3.9252;3.5843 -;-;-;-;-;-;-;- 111 + 1 2.958 41485.2 1.0 854 3702 4557 HBL1_DMSO_200M_050219_2,4558 HBL1_DMSO_200M_050219_2,4558,ITAKDSAKN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4559 22.235 800.0 110790.0 25 0 18455.0 + -1 LTGWPLTMK 9 101 531.7844107268922 1061.5542685205844 2 531.7850829958916 MULTI CID FTMS 0 0 0 4557 85109.6015625 0.2731625641406259 -9 0.1873950958251953 2 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 18.1463463914782 0.3454829746528889 4 [KT]T{[TV]|[{I|L}S]}HTTK 9 -1 42.884 0.0 0.0 4.0398 0.0 0.0 0.0 60.97393975688252 60.97393975688252 26.145410728492653 0.0 0.0 0.0 0 1.2059771852360797 0.0 1.25 0.3252574989159953 [KT]T{[TV]|[{I|L}S]}HTTK 4.0398 - 318 1 2.958 74539.4 0.449999988079071 855 3702 4557 HBL1_DMSO_200M_050219_2,4559 HBL1_DMSO_200M_050219_2,4559,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4561 22.241 194.0 166740.0 25 0 11481.0 + 26485 NTPINSNVT 9 68 480.243378171086 958.472203408972 2 480.2438537478447 MULTI CID FTMS 0 0 0 4560 235536.0625 0.8188217160509895 4 -0.1199359893798828 1 Unmodified _NTPINSNVT_ REV__ENSG00000171564|ENST00000302068|FGB 19.256988751693697 0.3154191944385105 4 [AG]SPVSQ 7 -1 32.589 0.0 0.0 3.4001 0.0 0.0 0.0 329.14631164555334 329.14631164555334 17.372310960715716 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.075257498915995 0.0 [AG]SPVSQ 3.4001 - 372 1 2.958 35190.9 1.0 856 3703 4560 HBL1_DMSO_200M_050219_2,4561 HBL1_DMSO_200M_050219_2,4561,NTPINSNVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4562 22.255 800.0 197200.0 25 0 28929.0 -1 0 75 931.9275337940584 1861.840514654917 2 931.927783191204 MULTI CID FTMS 0 0 0 4560 174038.25 0.4558311713121271 6 -0.1756458282470703 2 4 YSS{M(Oxidation (M))|F} 4 -1 16.146 0.0 0.0 0.86723 0.0 0.0 966.4914678793294 408.1265963190063 1374.6180641983358 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 YSS{M(Oxidation (M))|F} 0.86723 - 80 + 1 2.958 112054.2 0.699999988079071 857 3703 4560 HBL1_DMSO_200M_050219_2,4562 HBL1_DMSO_200M_050219_2,4562, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4563 22.269 800.0 98864.0 25 0 9162.3 + 36403 SHSSYSSSL 9 122 477.7118324831125 953.409112033025 2 477.7125121951103 MULTI CID FTMS 0 0 0 4560 86348.8203125 0.2039816421396159 -9 0.183023452758789 3 Unmodified _SYSHSSSSL_ nc|ENSG00000175920|Q18PE1-2|DOK7;ENSG00000175920|ENST00000340083|DOK7;nc|ENSG00000175920|Q18PE1-3|DOK7 39.957323273325 0.0756908302845263 4 [HS]SS[MT]SS 8 5 28.95 0.0 0.0 3.0365 0.0 0.0 0.0 146.08074722251038 146.08074722251038 9.0018312907727 0.0 0.0 0.0 0 0.0 0.0 2.0356668758921828 0.0 [HS]SS[MT]SS 3.0365 - 307 1 2.958 66183.7 0.4399999976158142 858 3703 4560 HBL1_DMSO_200M_050219_2,4563 HBL1_DMSO_200M_050219_2,4563,SYSHSSSSL True True SHSSYSSSL 22.269164 477.71251219511 2949879.75 4560.0 nc|ENSG00000175920|Q18PE1-2|DOK7;;ENSG00000175920|ENST00000340083|DOK7;;nc|ENSG00000175920|Q18PE1-3|DOK7 5.102138837178548 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4565 22.285 800.0 135320.0 25 0 18866.0 + 2660 ATDKNDPHL 9 127 505.74862480407927 1009.4826966749586 2 505.7489196658134 MULTI CID FTMS 0 0 0 4564 118153.1640625 0.4089249470633317 7 -0.1627998352050781 1 Unmodified _ATDKNDPHL_ ENSG00000167996|ENST00000273550|FTH1;ENST00000394290.3_1_2:27615653-27615842:-|nuORF 34.40172386719151 0.1061884637610825 4 [TA]ANDTA 7 5 45.255 0.0 0.0 4.483 0.0 0.0 0.0 362.1827106250032 362.1827106250032 35.255150314571594 0.0 0.0 0.0 0 0.9247425010840048 1.3010299956639813 0.8996498648046141 0.4247425010840047 [TA]ANDTA 4.483 - 318 1 2.958 85459.0 0.5799999833106995 859 3704 4564 HBL1_DMSO_200M_050219_2,4565 HBL1_DMSO_200M_050219_2,4565,ATDKNDPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4566 22.299 800.0 232340.0 25 0 37902.0 -1 0 169 384.2228319431032 383.2155554765032 1 384.2228881716728 MULTI CID FTMS 0 0 0 4564 123041.453125 0.9531919750893028 -2 0.0525417327880859 2 4 M 1 -1 12.764 0.0 0.0 3.3308 0.0 0.0 234.16400931126725 0.0 234.16400931126725 0.0 4.134999089607302 0.0 0.0 0 0.0 0.0 0.0 0.0 M 3.3308 - 13 + 1 2.958 146517.1 0.4699999988079071 860 3704 4564 HBL1_DMSO_200M_050219_2,4566 HBL1_DMSO_200M_050219_2,4566, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4568 22.304 22.0 2274800.0 25 0 130210.0 + 25648 NFSHGTHEY 9 76 364.4897886519621 1090.4475365560863 3 364.4894897341728 MULTI CID FTMS 0 0 0 4567 2190018.75 0.696076134820847 3 -0.0879096984863281 1 Unmodified _NFSHGTHEY_ ENSG00000067225|ENST00000335181|PKM;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;ENST00000564276.1_1_15:72502555-72511438:-|nuORF;nc|ENSG00000067225|P14618-2|PKM 23.1484247019978 0.2366544122328345 4 D{M(Oxidation (M))|F}AYHSSR 8 8 25.711 0.0 0.0 2.3579 0.0 0.0 109.06456954170078 0.0 109.06456954170078 0.0 11.5030565586067 0.0 0.0 0 0.6677353201839438 0.0 0.805462187404089 0.0 D{M(Oxidation (M))|F}AYHSSR 2.3579 - 182 1 2.958 45569.0 1.0 861 3705 4567 HBL1_DMSO_200M_050219_2,4568 HBL1_DMSO_200M_050219_2,4568,NFSHGTHEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4569 22.305 30.0 1244700.0 25 0 105820.0 + 25650 NFSHGTHEY 9 77 546.2307155774728 1090.4468782217457 2 546.2310058474541 MULTI CID FTMS 0 0 0 4567 1949835.25 0.6968028075306447 2 -0.0561161041259765 2 Unmodified _NFSHGTHEY_ ENSG00000067225|ENST00000335181|PKM;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;ENST00000564276.1_1_15:72502555-72511438:-|nuORF;nc|ENSG00000067225|P14618-2|PKM 53.832793166522166 0.0319663582346103 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SHGTHEY 9 0 + 48.075 0.0 0.0 4.4087 4.4087 83.583 0.0 0.0 0.0 33.63798466605289 12.230749808046326 12.230749808046326 28.883578386120234 0 1.305462187404089 0.0 0.5 0.0 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SHGTHEY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[DA]|[EG]}TGHSSR;[Y{M(Oxidation (M))|F}]{[WT]|[RM]}[MT]{[QD]|[EN]|[WG]|[KD]|[RS]};[Y{M(Oxidation (M))|F}][MT]T[NS]{NN|[MP]|[D{I|L}]|[EV]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[HM]HY{[QD]|[EN]|[WG]|[KD]|[RS]} 4.4087;1.76;0.90085;0.15093;0.047618 +;-;-;-;- + 181 + 1 2.958 34403.5 1.0 862 3705 4567 HBL1_DMSO_200M_050219_2,4569 HBL1_DMSO_200M_050219_2,4569,NFSHGTHEY True True NFSHGTHEY 22.305026 546.231005847454 29982068.0 4567.0 ENSG00000067225|ENST00000335181|PKM;;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;;ENST00000564276.1_1_15:72502555-72511438:-|nuORF;;nc|ENSG00000067225|P14618-2|PKM 7.551205635070801 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4570 22.318 771.0 136240.0 25 0 18763.0 16597 KDTNPTAAV 9 128 458.74032340532807 915.4660938774562 2 458.7408325076103 MULTI CID FTMS 0 0 0 4567 109924.0546875 0.1376006009633533 -33 0.5546951293945312 3 Unmodified _KDTNPTAAV_ ENSG00000156510|ENST00000354624|HKDC1;nc|ENSG00000156510|Q2TB90-2|HKDC1;nc|ENSG00000156510|Q2TB90-3|HKDC1 16.942295170755138 0.3780752226737986 4 [VG]SA 4 8 21.554 0.0 0.0 2.3545 0.0 0.0 0.0 598.2838178366936 598.2838178366936 -0.3961103294598977 0.0 -0.3961103294598977 0.0 0 0.0 2.0 0.2134679910804404 0.0 [VG]SA 2.3545 - 473 1 2.958 85376.4 1.0 863 3705 4567 HBL1_DMSO_200M_050219_2,4570 HBL1_DMSO_200M_050219_2,4570,KDTNPTAAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4572 22.323 33.0 1407500.0 25 0 164170.0 + 18127 KTLQVKDKA 9 66 515.8161656526202 1029.6177783720402 2 515.8166381716728 MULTI CID FTMS 0 0 0 4571 1741638.5 0.3840981881115461 4 -0.1055927276611328 1 Unmodified _KTLQVKDKA_ ENST00000532980.3_1_11:59055317-59056556:-|nuORF 45.739877483867886 0.0497104363764649 4 KT{I|L}Q[QT]{I|L}AK 9 5 + 87.59 0.0 0.0 8.5071 8.5071 92.693 0.0 0.0 0.0 80.60046135333776 17.860279740530828 17.860279740530828 9.208187539523747 0 2.504432191740108 0.0 0.4247425010840047 0.6694451763165201 KT{I|L}Q[QT]{I|L}AK;KT{I|L}[AG][QT]{I|L}AK;[KT]{I|L}Q[QT]{I|L}AK;[Q{I|L}][KT][QT]{I|L}AK;[QT][K{I|L}][QT]{I|L}AK;[{I|L}A]G[KT][QT]{I|L}AK;[Q{I|L}][QT][KT]{I|L}AK;[QT][Q{I|L}][KT]{I|L}AK;[{I|L}A]G[QT][KT]{I|L}AK 8.5071;7.6127;4.6066;2.8531;2.617;2.6104;2.5385;2.3024;2.2958 -;-;-;-;-;-;-;-;- 192 + 1 2.95 40772.1 1.0 864 3706 4571 HBL1_DMSO_200M_050219_2,4572 HBL1_DMSO_200M_050219_2,4572,KTLQVKDKA True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4573 22.328 232.0 458260.0 25 0 27486.0 + 17320 KLTQTPSKK 9 130 344.21383589875995 1029.6196782964798 3 344.2135497927666 MULTI CID FTMS 0 0 0 4571 238908.875 0.2771526494342087 6 -0.1174488067626953 2 Unmodified _KLTQTPSKK_ REV__ENST00000416708.1_1_7:46017982-46019554:+|nuORF 21.53697664764585 0.2571576504437394 4 [{I|L}T]KQTQ{I|L}AK 9 -1 [{I|L}T]KQ + + 39.557 23.275 4.9492 3.8419 3.8419 48.158 0.0 0.0 0.0 0.0 16.28210336668664 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4876954943324545 [{I|L}T]KQTQ{I|L}AK 3.8419 - 238 + 1 2.95 87063.7 1.0 865 3706 4571 HBL1_DMSO_200M_050219_2,4573 HBL1_DMSO_200M_050219_2,4573,KLTQTPSKK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4574 22.341 800.0 146020.0 25 0 42856.0 36405 SYSPYVTELIM 11 93 434.8821960169442 0 434.8822814822197 PEAK CID FTMS 0 0 0 4571 183214.703125 0.7134250256238773 -42 0.6564998626708984 3 Unmodified _SYSPYVTELIM_ ENSG00000164118|ENST00000503780|CEP44;nc|ENSG00000164118|Q9C0F1-2|CEP44 3.2813086475875832 0.4761840153648598 4 P 1 10 6.9897 0.0 0.0 0.8055 0.0 0.0 160.31580855673832 607.3596301517501 767.6754387084884 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.8055 + + 18 + 1 2.95 98167.3 0.6499999761581421 866 3706 4571 HBL1_DMSO_200M_050219_2,4574 HBL1_DMSO_200M_050219_2,4574,SYSPYVTELIM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4575 22.355 800.0 107080.0 25 0 26694.0 + -1 LRVYMFIIS 9 101 579.3228946598933 1156.6312363865866 2 579.3231689333916 MULTI CID FTMS 0 0 0 4571 102826.9375 0.053531865176167 14 -0.1776580810546875 4 Oxidation (M) _LRVYM(Oxidation (M))FIIS_ REV__ENSG00000188340|ENST00000641131|OR6N2 10.823927491677226 0.5436922275383211 4 S{I|L} 2 -1 24.949 0.0 0.0 2.157 0.0 0.0 938.5073460229386 0.0 938.5073460229386 0.0 13.354706403678875 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 S{I|L} 2.157 - 14 1 2.95 70306.9 0.4799999892711639 867 3706 4571 HBL1_DMSO_200M_050219_2,4575 HBL1_DMSO_200M_050219_2,4575,LRVYMFIIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4577 22.372 800.0 165250.0 25 0 20685.0 23151 LSPVAIEQTSL 11 150 386.5511286272418 1156.6315564819256 3 386.5507385134697 MULTI CID FTMS 0 0 0 4576 100013.984375 0.0455766355680002 14 -0.1526508331298828 1 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 28.49450938151212 0.4231428536161201 4 QTS{I|L} 4 7 41.247 0.0 0.0 3.5662 0.0 0.0 709.3988001304524 0.0 709.3988001304524 0.0 30.78971904076305 0.0 0.0 0 0.7614393726401688 0.0 0.9247425010840048 0.3494850021680094 + QTS{I|L} 3.5662 + + 142 1 2.95 105203.5 0.4699999988079071 868 3707 4576 HBL1_DMSO_200M_050219_2,4577 HBL1_DMSO_200M_050219_2,4577,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4578 22.373 69.0 612040.0 25 0 41724.0 + 12339 GTAAGEKLK 9 74 437.75325377987207 873.4919546265442 2 437.7533141970634 MULTI CID FTMS 0 0 0 4576 803072.625 0.8195182563902197 -3 0.0861167907714843 2 Unmodified _GTAAGEKLK_ ENSG00000131721|ENST00000371388|RHOXF2;ENSG00000203989|ENST00000371402|RHOXF2B 34.40172386719151 0.1061884637610825 4 {[SA]|[TG]}AQVG{I|L}TK 9 5 + 81.309 0.0 0.0 9.3085 9.3085 93.567 0.0 0.0 0.0 61.89896278884482 14.09256854528806 14.09256854528806 9.208187539523747 0 0.6989700043360187 2.0 0.3494850021680094 0.5752574989159953 {[SA]|[TG]}AQVG{I|L}TK;{[SA]|[TG]}A[AG]VG{I|L}TK 9.3085;8.2543 -;- 98 + 1 2.95 38901.8 1.0 869 3707 4576 HBL1_DMSO_200M_050219_2,4578 HBL1_DMSO_200M_050219_2,4578,GTAAGEKLK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4579 22.387 800.0 204410.0 25 0 15760.0 + 24140 LYQENKREY 9 124 414.875336947316 1241.604181442148 3 414.8752014040947 MULTI CID FTMS 0 0 0 4576 91687.5546875 0.2577685907138877 -17 0.3844738006591797 3 Unmodified _LYQENKREY_ ENSG00000077721|ENST00000371558|UBE2A;ENSG00000119048|ENST00000265339|UBE2B;ENST00000499038.2_1_5:133721305-133726041:+|nuORF;ENST00000503080.1_1_5:133723966-133726041:+|nuORF;nc|ENSG00000077721|P49459-2|UBE2A;nc|ENSG00000077721|P49459-3|UBE2A 51.629811660486645 0.0367964933207742 4 {I|L}YQENK{[RE]|[WV]}Y 9 0 + 81.961 0.0 0.0 6.6012 6.6012 87.941 0.0 0.0 0.0 61.03076880544919 4.973024840566467 4.973024840566467 9.208187539523747 0 0.0 2.0 0.3807196863200844 1.6549471895720984 + + {I|L}YQENK{[RE]|[WV]}Y;{I|L}YQEGGK{[RE]|[WV]}Y;{I|L}Y[AG]ENK{[RE]|[WV]}Y;{I|L}YQE[RK]{[QD]|[EN]|[WG]|[KD]|[RS]}Y;[HS]{[QN]|[E{I|L}]|[KN]}KNHC{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[HS]{[QN]|[E{I|L}]|[KN]}[QP]QE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[HS]{[QN]|[E{I|L}]|[KN]}[QP]EQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[RH]Y[YR]{[RE]|[WV]}Y;[HS]{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[YQ][WQ][{I|L}T]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 6.6012;5.8596;5.8596;5.091;2.1815;1.2595;1.1588;1.0851;0.97581;0.77979 +;-;-;-;-;-;-;-;-;- + 350 + 1 2.95 131571.2 0.9700000286102296 870 3707 4576 HBL1_DMSO_200M_050219_2,4579 HBL1_DMSO_200M_050219_2,4579,LYQENKREY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4581 22.392 29.0 1386500.0 25 0 156190.0 + 35514 STMSTNGIPR 10 68 540.2609941854893 1078.5074354377784 2 540.2614623904228 MULTI CID FTMS 0 0 0 4580 1830467.875 0.2640264626807082 -33 0.6216773986816406 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 55.50274090549119 0.048383292844968 4 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 74.659 0.0 0.0 6.9224 6.9224 84.451 0.0 0.0 0.0 7.269987279362624 5.228787452803374 5.228787452803374 5.228787452803374 0 0.4247425010840047 0.0 0.4247425010840047 1.1549471895720984 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR 6.9224;6.4376;6.0727;5.5878 -;+;-;- + 175 + 1 2.95 37371.8 1.0 871 3708 4580 HBL1_DMSO_200M_050219_2,4581 HBL1_DMSO_200M_050219_2,4581,STMSTNGIPR True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4582 22.397 289.0 189750.0 25 0 25120.0 + 34769 SQAPSTMQV 9 93 482.7236594732528 963.4327660133056 2 482.7240783572197 MULTI CID FTMS 0 0 0 4580 247881.453125 0.6514726454726746 3 -0.0448894500732421 2 Oxidation (M) _SQAPSTM(Oxidation (M))QV_ ENSG00000112658|ENST00000265354|SRF 47.74868867922204 0.0453060283459952 4 {[QS]|[NT]}A{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}QV 9 2 + 40.473 0.0 0.0 4.2009 4.2009 80.778 0.0 0.0 0.0 16.00858579803864 0.5192435809753704 0.5192435809753704 13.354706403678872 0 1.0 1.0969100130080565 0.0 1.1421590589602533 {[QS]|[NT]}A{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}QV;{[QS]|[NT]}A[{I|L}T][DC]QV;{[QS]|[NT]}A[{I|L}T]TS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}GQA[WK];{[QS]|[NT]}A{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}[AG]V;{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}QA[WK];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}G[AG]A[WK];{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}[AG]A[WK];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}QQ[WK];[VG][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]PA[WK] 4.2009;2.8147;2.319;2.2118;2.0596;2.019;1.2504;1.0577;0.12329;0.10742 -;-;-;-;-;-;-;-;-;- 311 + 1 2.95 48081.5 1.0 872 3708 4580 HBL1_DMSO_200M_050219_2,4582 HBL1_DMSO_200M_050219_2,4582,SQAPSTMQV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4583 22.411 800.0 104100.0 25 0 11049.0 -1 PKLGPMELAI 10 104 542.8090478426373 1083.6035427520744 2 542.8090698122978 MULTI CID FTMS 0 0 0 4580 91555.53125 0.6498069227891881 -11 0.2529125213623047 3 Oxidation (M) _PKLGPM(Oxidation (M))ELAI_ ENSG00000123612|ENST00000243349|ACVR1C;nc|ENSG00000123612|Q8NER5-4|ACVR1C 22.736283301280096 0.4578556481593033 4 KPT{M(Oxidation (M))|F} 4 -1 44.993 0.0 0.0 4.1521 0.0 0.0 0.0 607.3388765924436 607.3388765924436 28.003122090841828 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 KPT{M(Oxidation (M))|F} 4.1521 - 275 + 1 2.95 69267.6 0.4600000083446502 873 3708 4580 HBL1_DMSO_200M_050219_2,4583 HBL1_DMSO_200M_050219_2,4583,PKLGPMELAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4585 22.416 99.0 792090.0 25 0 94957.0 + 27315 PHPHGREALPV 11 77 403.887806312762 1208.641589538486 3 403.8878051638603 MULTI CID FTMS 0 0 0 4584 369440.34375 0.0904127700454626 40 -0.6715297698974609 1 Unmodified _PHPHGREALPV_ ENST00000400451.6_1_22:20760237-20760540:+|nuORF 9.38312468134398 0.8308777417566128 4 [{I|L}T]HPP 5 9 20.515 0.0 0.0 1.6974 0.0 0.0 0.0 660.3217268350056 660.3217268350056 7.3273444806169135 0.0 0.0 0.0 0 1.5 0.0 0.3252574989159953 0.0 [{I|L}T]HPP 1.6974 - 118 1 2.95 64877.0 1.0 874 3709 4584 HBL1_DMSO_200M_050219_2,4585 HBL1_DMSO_200M_050219_2,4585,PHPHGREALPV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4586 22.424 445.0 255530.0 25 0 27030.0 + 10057 FPRERKAK 8 125 344.54193577184344 1030.6039779157304 3 344.5403625369072 MULTI CID FTMS 0 0 0 4584 95314.3828125 0.314785562506044 -23 0.5464859008789062 2 Unmodified _FPRERKAK_ ENST00000263253.8_1_22:41488148-41488439:+|nuORF 21.74664581756881 0.5868176546531598 4 K{I|L}E 3 7 30.445 0.0 0.0 2.9541 0.0 0.0 642.3558476877232 0.0 642.3558476877232 0.0 10.254537344402904 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 K{I|L}E 2.9541 - 60 1 2.95 91841.1 1.0 875 3709 4584 HBL1_DMSO_200M_050219_2,4586 HBL1_DMSO_200M_050219_2,4586,FPRERKAK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4588 22.429 33.0 1295400.0 25 0 97120.0 + 34632 SPMSRTSFG 9 80 485.2263109452153 968.4380689572306 2 485.2267333865166 MULTI CID FTMS 0 0 0 4587 1850207.375 0.8969514643060904 4 -0.0291118621826171 1 Unmodified _SPMSRTSFG_ REV__ENSG00000085511|ENST00000392142|MAP3K4 34.40172386719151 0.1061884637610825 4 SPA{M(Oxidation (M))|F}PHNS{I|L} 9 -1 + 73.857 0.0 0.0 7.6264 7.6264 95.02 0.0 0.0 0.0 51.52645998653237 13.789269400097012 13.789269400097012 22.913252988205663 0 2.136500636031869 2.0 0.3252574989159953 0.8494850021680094 SPA{M(Oxidation (M))|F}PHNS{I|L};SP[WE]HNS{I|L};SP{[WN]|[YH]}{[YC]|[HE]}S{I|L};S[WE]PHNS{I|L} 7.6264;5.2604;4.4391;4.3582 -;-;-;- 526 + 1 2.95 38223.8 1.0 876 3710 4587 HBL1_DMSO_200M_050219_2,4588 HBL1_DMSO_200M_050219_2,4588,SPMSRTSFG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4589 22.432 161.0 299000.0 25 0 34441.0 + 36634 TATKTRSN 8 70 439.73623268224617 877.4579124312924 2 439.7364379763603 MULTI CID FTMS 0 0 0 4587 427778.71875 0.3913619510793809 10 -0.0720653533935546 2 Unmodified _TATKTRSN_ REV__ENST00000481667.1_1_7:72954286-72958015:-|nuORF 25.399314129420983 0.5099049743284904 4 [TA]TP{I|L}T{M(Oxidation (M))|F}K 8 -1 [TA] + + 40.839 24.434 14.199 4.6543 4.6543 51.098 0.0 0.0 0.0 0.0 9.156687756324686 0.0 0.0 0 1.0 0.0 0.5 0.0 [TA]TP{I|L}T{M(Oxidation (M))|F}K 4.6543 - 177 + 1 2.95 43038.0 1.0 877 3710 4587 HBL1_DMSO_200M_050219_2,4589 HBL1_DMSO_200M_050219_2,4589,TATKTRSN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4593 22.453 613.0 147240.0 25 0 60847.0 + 39760 VELQKKCQ 8 81 488.2676499955664 0 488.2670471072197 PEAK CID FTMS 0 0 0 4592 106590.765625 0.5922570339003284 16 -0.1617851257324218 1 Unmodified _VELQKKCQ_ REV__ENSG00000135341|ENST00000369329|MAP3K7;REV__nc|ENSG00000135341|O43318-2|MAP3K7 16.942295170755138 0.4635191396245973 4 Q{I|L} 2 -1 9.464 0.0 0.0 0.97114 0.0 0.0 505.2716273462028 225.0882509820922 730.359878328295 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L} 0.97114 - 46 + 1 2.95 76109.1 1.0 878 3713 4592 HBL1_DMSO_200M_050219_2,4593 HBL1_DMSO_200M_050219_2,4593,VELQKKCQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4599 22.476 183.0 261800.0 25 0 44540.0 + 23337 LTAYANVVP 9 68 474.2615532961072 946.5085536590144 2 474.2617065310478 MULTI CID FTMS 0 0 0 4598 202410.515625 0.0312978517978359 21 -0.2592048645019531 1 Unmodified _LTAYANVVP_ REV__ENSG00000109805|ENST00000251496|NCAPG;REV__ENST00000557911.1_1_15:30297419-30297614:+|nuORF 19.256988751693697 0.3154191944385105 4 [{I|L}T]AQSVSNK 9 -1 + 68.286 0.0 0.0 7.2146 7.2146 90.001 0.0 0.0 0.0 54.30700026649546 10.590992953673537 10.590992953673537 9.208187539523747 0 0.8494850021680094 2.0 0.0 0.5 [{I|L}T]AQSVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSNK;[{I|L}T]AQ[{M(Oxidation (M))|F}T]AVP;[{I|L}T]A[AG]SVSGGK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVSQAVP;[{I|L}T]A[{M(Oxidation (M))|F}T]QAVP;[{I|L}T]A[AG][{M(Oxidation (M))|F}T]AVP;[{I|L}T][YN]{[VA]|[{I|L}G]}AVP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVS[AG]AVP 7.2146;6.2417;6.2417;5.4762;5.2735;4.8354;4.706;3.9751;3.5477;3.3343 -;-;-;-;-;-;-;-;-;- 187 + 1 2.942 45235.6 1.0 879 3718 4598 HBL1_DMSO_200M_050219_2,4599 HBL1_DMSO_200M_050219_2,4599,LTAYANVVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4600 22.49 800.0 88698.0 25 0 6524.7 + 24142 LYQENKREY 9 64 621.8089499963098 1241.6033470594195 2 621.8088867068291 MULTI CID FTMS 0 0 0 4598 80474.8125 0.7533569396646044 -5 0.0290718078613281 2 Unmodified _LYQENKREY_ ENSG00000077721|ENST00000371558|UBE2A;ENSG00000119048|ENST00000265339|UBE2B;ENST00000499038.2_1_5:133721305-133726041:+|nuORF;ENST00000503080.1_1_5:133723966-133726041:+|nuORF;nc|ENSG00000077721|P49459-2|UBE2A;nc|ENSG00000077721|P49459-3|UBE2A 38.61474834105838 0.0830609365873449 4 Y{I|L}QENK{[RE]|[WV]}Y 9 2 + 83.862 0.0 0.0 6.7543 6.7543 77.064 0.0 0.0 0.0 65.36683765109139 9.220449851406514 9.220449851406514 1.2371250542002343 0 1.3494850021680094 2.0 0.4247425010840047 0.8494850021680094 Y{I|L}QENK{[RE]|[WV]}Y;{I|L}YQENK{[RE]|[WV]}Y;Y{I|L}QEGGK{[RE]|[WV]}Y;Y{I|L}[AG]ENK{[RE]|[WV]}Y;{I|L}YQEGGK{[RE]|[WV]}Y;{I|L}Y[AG]ENK{[RE]|[WV]}Y 6.7543;6.6547;6.0127;6.0127;5.913;5.913 -;+;-;-;-;- + 117 + 1 2.942 56956.0 0.4600000083446502 880 3718 4598 HBL1_DMSO_200M_050219_2,4600 HBL1_DMSO_200M_050219_2,4600,LYQENKREY True True LYQENKREY 22.490083 621.808886706829 5057965.4375 4598.0 nc|ENSG00000077721|P49459-2|UBE2A;;nc|ENSG00000077721|P49459-3|UBE2A;;ENSG00000119048|ENST00000265339|UBE2B;;ENSG00000077721|ENST00000371558|UBE2A;;ENST00000499038.2_1_5:133721305-133726041:+|nuORF;;ENST00000503080.1_1_5:133723966-133726041:+|nuORF 7.219588279724121 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4602 22.496 171.0 288470.0 25 0 43359.0 -1 MKSKPTGQK 9 62 531.7844107268922 1061.5542685205844 2 531.7845336794853 MULTI CID FTMS 0 0 0 4601 253311.390625 0.8130127238151788 8 -0.0789127349853515 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))KSKPTGQK_ ENST00000458479.1_1_21:34101177-34101306:+|nuORF 20.453626601364224 0.2830276176381075 4 TA[DP]K 5 -1 21.555 0.0 0.0 2.0305 0.0 0.0 531.2853609051532 0.0 531.2853609051532 0.0 11.377268672201453 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.2742275032520141 TA[DP]K 2.0305 - 39 + 1 2.942 42221.8 1.0 881 3719 4601 HBL1_DMSO_200M_050219_2,4602 HBL1_DMSO_200M_050219_2,4602,MKSKPTGQK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4604 22.508 530.0 90040.0 25 0 6221.8 + 41537 VPNTSQSQV 9 97 480.243378171086 958.472203408972 2 480.2436706423759 MULTI CID FTMS 0 0 0 4603 120315.0078125 0.4182652122059629 21 -0.3196086883544922 1 Unmodified _VPNTSQSQV_ ENSG00000103064|ENST00000219343|SLC7A6 29.081581746732265 0.1611639662936252 4 [AG]SPVSQSQV 10 5 + 56.73 0.0 0.0 5.9188 5.9188 76.344 0.0 0.0 0.0 7.723989214945526 8.507112333562858 7.723989214945526 2.525749891599532 0 0.2742275032520141 1.3979400086720375 1.885151878060192 0.0 [AG]SPVSQSQV;[AG]SPSVQSQV;[AG]SPSQVSQV;{[QS]|[NT]}PVSQSQV;[AG]SPVS[AG]SQV;{[QS]|[NT]}PSVQSQV;[AG]SPSV[AG]SQV;{[QS]|[NT]}PSQVSQV;[AG]SPS[AG]VSQV;[NP]TVSQSQV 5.9188;5.6553;5.491;5.113;4.9627;4.8495;4.6992;4.6852;4.5349;4.3791 -;-;-;-;-;-;-;-;-;- 743 1 2.942 44634.0 1.0 882 3720 4603 HBL1_DMSO_200M_050219_2,4604 HBL1_DMSO_200M_050219_2,4604,VPNTSQSQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4606 22.514 177.0 238350.0 25 0 30108.0 + 36404 SYSHSSSSL 9 78 477.7118324831125 953.409112033025 2 477.7119018435478 MULTI CID FTMS 0 0 0 4605 380064.46875 0.8978255194914682 9 -0.0977191925048828 1 Unmodified _SYSHSSSSL_ ENSG00000139641|ENST00000394048|ESYT1;ENST00000548142.1_1_12:56532791-56536718:+|nuORF;nc|ENSG00000139641|Q9BSJ8-2|ESYT1 54.773552608820026 0.0299037012502309 4 [HS]SYSSSS{I|L} 9 2 + 39.777 0.0 0.0 4.1721 4.1721 71.397 0.0 0.0 0.0 3.582942452024831 7.944539621753542 3.582942452024831 3.582942452024831 0 0.7429928190999391 0.0 1.3807196863200843 0.0 [HS]SYSSSS{I|L};{[CA]|SS}HYSSSS{I|L};{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))N]SSSS{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[HS]SSSS{I|L};[HV]SY[MN]{[CT]|[{M(Oxidation (M))|F}G]};{[CA]|SS}{[MG]|[TS]}[QA]SSS{I|L};[HV]SY{[CA]|SS}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[HV]YS[MN]{[CT]|[{M(Oxidation (M))|F}G]};{[CA]|SS}HY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}S{I|L};[HV]YS{[CA]|SS}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.1721;3.7963;3.4476;2.9367;2.3831;1.9121;1.8826;1.4833;1.2571;0.98287 -;-;-;+;-;-;-;-;-;- + 241 1 2.942 37460.6 1.0 883 3721 4605 HBL1_DMSO_200M_050219_2,4606 HBL1_DMSO_200M_050219_2,4606,SYSHSSSSL True True SYSHSSSSL 22.513799 477.711901843548 2949879.75 4605.0 ENSG00000139641|ENST00000394048|ESYT1;;ENST00000548142.1_1_12:56532791-56536718:+|nuORF;;nc|ENSG00000139641|Q9BSJ8-2|ESYT1 5.44085677464803 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4610 22.535 621.0 107500.0 25 0 13838.0 + 16619 KEFYQFPRYWW 11 77 550.6030599085308 1648.7873503257922 3 550.6030151247978 MULTI CID FTMS 0 0 0 4609 52444.05078125 0.4216001974590958 -7 0.0565872192382812 1 Unmodified _KEFYQFPRYWW_ REV__ENSG00000198964|ENST00000361781|SGMS1;REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1 1.1097533296519684 0.8699120469545434 4 {[VA]|[{I|L}G]}[YK]SGGSG 9 -1 32.997 0.0 0.0 2.0013 0.0 0.0 0.0 839.3746296197987 839.3746296197987 23.07592691885308 0.0 0.0 0.0 0 1.305462187404089 0.958607314841775 0.4247425010840047 0.0 {[VA]|[{I|L}G]}[YK]SGGSG 2.0013 - 154 1 2.942 55181.3 1.0 884 3724 4609 HBL1_DMSO_200M_050219_2,4610 HBL1_DMSO_200M_050219_2,4610,KEFYQFPRYWW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4611 22.549 800.0 127760.0 25 0 14568.0 + 17671 KPTGARPSAL 10 92 499.2931762711508 996.5717996091016 2 499.2924682497978 MULTI CID FTMS 0 0 0 4609 86436.21875 0.0005154011925655 -21 0.2863941192626953 2 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 23.78978130925829 0.4341852049148378 4 KPTG 4 6 49.68 0.0 0.0 4.9851 0.0 0.0 0.0 610.3306978815061 610.3306978815061 35.8669103713555 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 + KPTG 4.9851 + + 57 + 1 2.942 80394.5 0.4900000095367431 885 3724 4609 HBL1_DMSO_200M_050219_2,4611 HBL1_DMSO_200M_050219_2,4611,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4614 22.562 346.0 373840.0 25 0 28642.0 + 4218 DAPKDYRQV 9 138 364.5210793906279 1090.5414087720835 3 364.5207702517509 MULTI CID FTMS 0 0 0 4613 197275.6875 0.0159076234161981 -18 0.1658935546875 1 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 41.8396318013385 0.0653578398400075 4 {[DA]|[EG]}PKDV 6 3 55.916 0.0 0.0 5.1274 0.0 0.0 0.0 462.21152673892817 462.21152673892817 25.3354628227035 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.7742275032520141 {[DA]|[EG]}PKDV 5.1274 - 359 + 1 2.942 111479.7 1.0 886 3726 4613 HBL1_DMSO_200M_050219_2,4614 HBL1_DMSO_200M_050219_2,4614,DAPKDYRQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4615 22.569 410.0 257120.0 25 0 28341.0 + 4223 DAPKDYRQV 9 102 546.2775250394335 1090.540497145667 2 546.2772704958916 MULTI CID FTMS 0 0 0 4613 174796.46875 0.0161443627743003 -17 0.141977310180664 2 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 18.373094154950223 0.3393451798331396 4 DAPKDV 6 3 64.223 0.0 0.0 5.8891 0.0 0.0 0.0 462.2110994928344 462.2110994928344 43.25384435441396 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.0 DAPKDV 5.8891 - 227 + 1 2.942 87316.0 1.0 887 3726 4613 HBL1_DMSO_200M_050219_2,4615 HBL1_DMSO_200M_050219_2,4615,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4617 22.574 102.0 448230.0 25 0 116380.0 + 34685 SPSPSSLKN 9 66 458.74032340532807 915.4660938774562 2 458.7403747439384 MULTI CID FTMS 0 0 0 4616 605740.5625 0.7582531927596176 -11 0.1079692840576171 1 Unmodified _SPSPSSLKN_ REV__ENST00000602622.5_1_16:67692761-67693112:-|nuORF;REV__ENST00000602860.5_1_16:67691511-67693112:-|nuORF 22.736283301280096 0.2418982879461534 4 GSPNTV[RD] 8 -1 31.455 0.0 0.0 3.436 0.0 0.0 71.07426650215 0.0 71.07426650215 0.0 7.045167924123042 0.0 0.0 0 0.0 0.0 0.6139829889124311 0.2742275032520141 GSPNTV[RD] 3.436 - 175 1 2.942 41061.1 1.0 888 3727 4616 HBL1_DMSO_200M_050219_2,4617 HBL1_DMSO_200M_050219_2,4617,SPSPSSLKN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4619 22.59 800.0 117620.0 25 0 11570.0 + 16786 KGKEKEIAK 9 123 515.8161656526202 1029.6177783720402 2 515.8164550662041 MULTI CID FTMS 0 0 0 4618 84456.2734375 0.0186258523809602 26 -0.7005901336669922 1 Unmodified _KGKEKEIAK_ ENSG00000138593|ENST00000559471|SECISBP2L;ENST00000559198.1_1_15:49303877-49305024:-|nuORF;nc|ENSG00000138593|Q93073-2|SECISBP2L 19.361941925380144 0.3125782356748823 4 KT{I|L}QTQ{I|L}AK 9 5 + 56.182 0.0 0.0 5.4566 5.4566 83.453 0.0 0.0 0.0 38.021694116643374 15.043096649567076 15.043096649567076 9.208187539523747 0 1.5044321917401078 0.0 0.3494850021680094 0.2059771852360797 KT{I|L}QTQ{I|L}AK;KT{I|L}[AG]TQ{I|L}AK;{[QD]|[EN]|[WG]|[KD]|[RS]}G[KS][{I|L}A]{I|L}AK;[W{I|L}][KS][KG]RR;[Q{I|L}]T[TA][KG]{I|L}AK;[QT]{I|L}[TA][KG]{I|L}AK;AATV[TA][KG]{I|L}AK;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}[KT]AK;AATV[Q{I|L}][KT]AK;[Q{I|L}]T[Q{I|L}][KT]AK 5.4566;4.5623;1.5143;0.84252;0.73317;0.64559;0.61016;0.34175;0.31093;0.068409 -;-;-;-;-;-;-;-;-;- 885 + 1 2.942 79436.8 0.4699999988079071 889 3728 4618 HBL1_DMSO_200M_050219_2,4619 HBL1_DMSO_200M_050219_2,4619,KGKEKEIAK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4620 22.602 655.0 107700.0 25 0 8832.5 + 27525 SPKPVSSTV 9 121 451.2530790320907 900.4916051309814 2 451.2526733279228 MULTI CID FTMS 0 0 0 4618 87915.375 0.5546137825455549 -7 0.0659542083740234 2 Unmodified _PKSQLETV_ ENSG00000092148|ENST00000399332|HECTD1 28.486842064014134 0.4448922141344407 4 [PS]K[VP]SSTV 9 5 + 36.238 0.0 0.0 4.0242 4.0242 65.798 0.0 0.0 0.0 7.958800173440753 10.330145895351851 7.958800173440753 0.9691001300805624 0 0.7429928190999391 1.0457574905606752 0.4247425010840047 0.0 [PS]K[VP]SSTV;[PS]V[KP]SSTV;[VG][VG][VP]SSTV;[KP]S[VP]SSTV;[VG][QP][{I|L}T]STV;[VP]S[KP]SSTV;[VS]P[KP]SSTV;[VP]{[QG]|[NA]}[{I|L}T]STV 4.0242;3.9166;3.1404;3.0838;2.1451;2.0038;1.9555;0.093556 -;-;-;-;-;-;-;- 180 1 2.942 60214.0 1.0 890 3728 4618 HBL1_DMSO_200M_050219_2,4620 HBL1_DMSO_200M_050219_2,4620,PKSQLETV False False SPKPVSSTV 22.601559 451.252673327923 948726.9375 4618.0 ENSG00000092148|ENST00000399332|HECTD1 5.855809688568115 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4624 22.618 320.0 382720.0 25 0 38462.0 20995 LNREGPKAL 9 145 333.1980830866818 996.5724198602454 3 333.1976501345634 MULTI CID FTMS 0 0 0 4623 261587.078125 0.0066211656248193 -14 0.1444950103759765 1 Unmodified _LNREGPKAL_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 27.628801355627647 0.1796483985696185 4 [KP]{[SA]|[TG]}QTPR{I|L} 9 8 + 39.248 0.0 0.0 3.9383 3.9383 64.607 0.0 0.0 0.0 5.4749216635743 15.283937381116822 5.4749216635743 0.4898413340043106 0 0.3807196863200844 0.0 0.3054621874040891 0.3054621874040891 [KP]{[SA]|[TG]}QTPR{I|L};[KP]{[SA]|[TG]}WPKA{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SPKA{I|L};[KP]{[SA]|[TG]}WPAK{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GVAR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SPAK{I|L};[TP][KG]QTPR{I|L};[TP][KG]WPKA{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GVRA{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GTPK{I|L} 3.9383;3.8891;3.7124;3.555;3.4595;3.3783;3.3211;3.2719;3.1851;3.153 -;-;-;-;-;-;-;-;-;- 845 1 2.942 100798.7 1.0 891 3731 4623 HBL1_DMSO_200M_050219_2,4624 HBL1_DMSO_200M_050219_2,4624,LNREGPKAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4627 22.629 248.0 176840.0 25 0 9135.7 + 12343 GTAQSIGLK 9 80 437.75325377987207 873.4919546265442 2 437.7534057497978 MULTI CID FTMS 0 0 0 4626 189651.3125 0.1935350653275183 23 -0.6827659606933594 1 Unmodified _GTAQSIGLK_ ENSG00000164061|ENST00000296452|BSN 29.081581746732265 0.1611639662936252 4 {[SA]|[TG]}AQVG{I|L}TK 9 3 + 77.284 0.0 0.0 8.8477 8.8477 93.16 0.0 0.0 0.0 70.37231238112012 13.886602580480968 13.886602580480968 9.208187539523747 0 0.4247425010840047 2.0 0.6549471895720984 0.6923877696554315 {[SA]|[TG]}AQVG{I|L}TK;{[SA]|[TG]}A[AG]VG{I|L}TK 8.8477;7.7935 -;- 91 + 1 2.942 40973.8 1.0 892 3733 4626 HBL1_DMSO_200M_050219_2,4627 HBL1_DMSO_200M_050219_2,4627,GTAQSIGLK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4628 22.633 210.0 251970.0 25 0 23208.0 + 24141 LYQENKREY 9 54 414.875336947316 1241.604181442148 3 414.8752014040947 MULTI CID FTMS 0 0 0 4626 228715.125 0.6430052109813571 9 -0.2576217651367187 2 Unmodified _LYQENKREY_ ENSG00000077721|ENST00000371558|UBE2A;ENSG00000119048|ENST00000265339|UBE2B;ENST00000499038.2_1_5:133721305-133726041:+|nuORF;ENST00000503080.1_1_5:133723966-133726041:+|nuORF;nc|ENSG00000077721|P49459-2|UBE2A;nc|ENSG00000077721|P49459-3|UBE2A 18.373094154950223 0.3393451798331396 4 {I|L}YQENK{[RE]|[WV]}Y 9 0 + 66.604 0.0 0.0 5.3643 5.3643 83.021 0.0 0.0 0.0 54.61426266193144 1.9627248839266545 1.9627248839266545 9.208187539523747 0 0.0 2.0 0.0 0.5 + + {I|L}YQENK{[RE]|[WV]}Y;{I|L}YQEGGK{[RE]|[WV]}Y;{I|L}Y[AG]ENK{[RE]|[WV]}Y 5.3643;4.6227;4.6227 +;-;- + 56 + 1 2.942 48898.9 1.0 893 3733 4626 HBL1_DMSO_200M_050219_2,4628 HBL1_DMSO_200M_050219_2,4628,LYQENKREY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4629 22.647 800.0 172150.0 25 0 31536.0 + 25197 MTGAPAPAQ 9 116 422.2047453127614 0 422.2049743533134 PEAK CID FTMS 0 0 0 4626 118915.90625 0.3550014665361088 -8 0.072998046875 3 Unmodified _MTGAPAPAQ_ REV__ENST00000585905.1_1_19:45898523-45909561:-|nuORF 7.289230182591677 0.3433663536648894 4 PS 2 -1 7.9588 0.0 0.0 0.94478 0.0 0.0 201.04459967435287 454.2424105279906 655.2870102023436 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PS 0.94478 - 23 + 1 2.942 109812.6 0.550000011920929 894 3733 4626 HBL1_DMSO_200M_050219_2,4629 HBL1_DMSO_200M_050219_2,4629,MTGAPAPAQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4630 22.661 800.0 115190.0 25 0 9112.0 + 6150 DSYTTNKV 8 124 464.2249154797337 926.4352780262674 2 464.2250854372978 MULTI CID FTMS 0 0 0 4626 91901.6328125 0.6922929749330742 -6 0.0528621673583984 4 Unmodified _DSYTTNKV_ ENSG00000078369|ENST00000378609|GNB1;ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000078369|P62873-2|GNB1;nc|ENSG00000111664|P16520-2|GNB3 24.020572477871973 0.5389365498350341 4 {[DS]|[MA]|[CV]|TT}YTTNKV 8 0 + 31.983 0.0 0.0 3.4523 3.4523 76.764 0.0 0.0 0.0 16.082645947910937 10.0854292192491 10.0854292192491 9.262137858390812 0 0.4247425010840047 0.0 0.0 0.25 + + {[DS]|[MA]|[CV]|TT}YTTNKV;{[DS]|[MA]|[CV]|TT}YTTGGKV;{[DS]|[MA]|[CV]|TT}YTT[KG]GV 3.4523;2.4525;1.3076 +;-;- + 89 + 1 2.942 73285.6 0.5 895 3733 4626 HBL1_DMSO_200M_050219_2,4630 HBL1_DMSO_200M_050219_2,4630,DSYTTNKV False True DSYTTNKV 22.660622 464.225085437298 918311.0625 4626.0 ENSG00000078369|ENST00000378609|GNB1;;nc|ENSG00000078369|P62873-2|GNB1;;ENSG00000111664|ENST00000229264|GNB3;;ENSG00000172354|ENST00000303210|GNB2;;nc|ENSG00000111664|P16520-2|GNB3 6.653396288553874 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4632 22.665 10.0 4205800.0 25 0 412720.0 + 35515 STMSTNGIPR 10 78 540.2609941854893 1078.5074354377784 2 540.2615234255791 MULTI CID FTMS 0 0 0 4631 5640899.0 0.8136425826698239 -7 0.0915737152099609 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 53.40400417844725 0.0601721406801337 4 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 67.256 0.0 0.0 6.236 6.236 57.574 0.0 0.0 0.0 7.269987279362624 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.4247425010840047 0.4247425010840047 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP 6.236;6.236;5.3862;5.3862 -;+;-;- + 121 + 1 2.942 40070.5 1.0 896 3734 4631 HBL1_DMSO_200M_050219_2,4632 HBL1_DMSO_200M_050219_2,4632,STMSTNGIPR True False STMSTNGIPR 22.665355 540.261523425579 416072880.0 4631.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 11.82912794748942 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4633 22.679 800.0 103070.0 25 0 10731.0 + 34770 SQAPSTMQV 9 133 482.7236594732528 963.4327660133056 2 482.7240783572197 MULTI CID FTMS 0 0 0 4631 89056.796875 0.2340557001181605 29 -0.6748409271240234 2 Oxidation (M) _SQAPSTM(Oxidation (M))QV_ ENSG00000112658|ENST00000265354|SRF 47.74868867922204 0.0453060283459952 4 {[QS]|[NT]}A{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}QV 9 2 + 41.718 0.0 0.0 4.3301 4.3301 80.806 0.0 0.0 0.0 23.582819993105662 0.2790870587951843 0.2790870587951843 12.015449934959712 0 1.0 0.958607314841775 0.0 1.4049471895720984 {[QS]|[NT]}A{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}QV;{[QS]|[NT]}{NN|[MP]|[D{I|L}]|[EV]}AG{M(Oxidation (M))|F}QV;{[QS]|[NT]}{NN|[MP]|[D{I|L}]|[EV]}Q{M(Oxidation (M))|F}QV;{[QS]|[NT]}A{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}[AG]V;{[QS]|[NT]}A[{I|L}T][DC]QV;{[QS]|[NT]}A{NN|[MP]|[D{I|L}]|[EV]}{[CP]|[EA]}[KC];[R{M(Oxidation (M))|F}][NP]G{M(Oxidation (M))|F}QV;{[QS]|[NT]}{NN|[MP]|[D{I|L}]|[EV]}Q{M(Oxidation (M))|F}[AG]V;{[QS]|[NT]}A[{I|L}T]{[MG]|[TS]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QS]|[NT]}{NN|[MP]|[D{I|L}]|[EV]}AG{M(Oxidation (M))|F}[AG]V 4.3301;3.083;2.7733;2.2788;2.2655;1.4499;1.262;1.0792;0.96203;0.77218 -;-;-;-;-;-;-;-;-;- 468 + 1 2.942 69412.7 0.5799999833106995 897 3734 4631 HBL1_DMSO_200M_050219_2,4633 HBL1_DMSO_200M_050219_2,4633,SQAPSTMQV True False SQAPSTMQV 22.679172 482.72407835722 10633359.0 4631.0 ENSG00000112658|ENST00000265354|SRF 8.296092828114828 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4635 22.686 210.0 248000.0 25 0 16335.0 + 34633 SPMSRTSFG 9 93 485.2263109452153 968.4380689572306 2 485.2264587283134 MULTI CID FTMS 0 0 0 4634 271575.40625 0.131655489863918 29 -0.6700344085693359 1 Unmodified _SPMSRTSFG_ REV__ENSG00000085511|ENST00000392142|MAP3K4 34.40172386719151 0.1061884637610825 4 SPA{M(Oxidation (M))|F}PHN{[TV]|[{I|L}S]} 9 -1 + 80.882 0.0 0.0 8.3518 8.3518 95.571 0.0 0.0 0.0 62.54985865934941 13.295219342863476 13.295219342863476 16.70818753952375 0 1.8494850021680087 2.0 0.3494850021680094 0.75 SPA{M(Oxidation (M))|F}PHN{[TV]|[{I|L}S]};SPA{M(Oxidation (M))|F}PHGG{[TV]|[{I|L}S]};SPA{M(Oxidation (M))|F}[HN]P{[CP]|[EA]};SP[WE]HN{[TV]|[{I|L}S]};S[WE]PHN{[TV]|[{I|L}S]};SP[WE]HGG{[TV]|[{I|L}S]};S[WE]PHGG{[TV]|[{I|L}S]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NA{M(Oxidation (M))|F}P{[WT]|[RM]} 8.3518;6.6265;5.0622;4.7167;3.6591;3.3218;1.9283;0.64954 -;-;-;-;-;-;-;- 513 + 1 2.942 46238.4 1.0 898 3735 4634 HBL1_DMSO_200M_050219_2,4635 HBL1_DMSO_200M_050219_2,4635,SPMSRTSFG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4636 22.691 295.0 393400.0 25 0 66952.0 + 19509 LFLQVLAVE 9 91 344.54193577184344 1030.6039779157304 3 344.5416442751884 MULTI CID FTMS 0 0 0 4634 179471.359375 0.592722642140161 3 -0.0451946258544921 2 Unmodified _LFLQVLAVE_ REV__ENSG00000110719|ENST00000265686|TCIRG1;REV__ENST00000533947.1_1_11:67808738-67810499:+|nuORF 10.073929032068715 0.563993802247229 4 K{I|L}E 3 -1 30.445 0.0 0.0 2.9541 0.0 0.0 642.3569849223474 0.0 642.3569849223474 0.0 9.018637558036673 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 K{I|L}E 2.9541 - 20 1 2.942 98450.4 1.0 899 3735 4634 HBL1_DMSO_200M_050219_2,4636 HBL1_DMSO_200M_050219_2,4636,LFLQVLAVE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4637 22.705 800.0 97884.0 25 0 8734.8 + -1 PKYGCNYSE 9 90 559.2345213900076 1116.454489846815 2 559.2347289919853 MULTI CID FTMS 0 0 0 4634 99155.3828125 1.0 0 0.0 3 Carbamidomethyl (C) _PKYGC(Carbamidomethyl (C))NYSE_ REV__ENSG00000136367|ENST00000419474|ZFHX2;REV__nc|ENSG00000136367|Q9C0A1-2|ZFHX2 2.059750862983233 0.8427793054688888 4 {I|L} 1 -1 4.6041 0.0 0.0 0.41239 0.0 0.0 97.90017707940451 902.4473570783726 1000.3475341577772 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.41239 - 16 + 1 2.942 64855.1 0.4600000083446502 900 3735 4634 HBL1_DMSO_200M_050219_2,4637 HBL1_DMSO_200M_050219_2,4637,PKYGCNYSE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4640 22.725 800.0 51636.0 25 0 8010.9 -1 0 38 1146.8024150018894 3437.3854156058683 3 1147.136035144329 MULTI CID FTMS 0 0 0 4639 96570.5703125 0.0861137458600584 -6 0.0986289978027343 1 4 G 1 -1 6.9897 0.0 0.0 0.20334 0.0 0.0 1255.4306581408252 2121.916938213745 3377.3475963545707 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20334 - 15 + 1 2.942 38113.5 0.4099999964237213 901 3737 4639 HBL1_DMSO_200M_050219_2,4640 HBL1_DMSO_200M_050219_2,4640, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4643 22.744 800.0 214030.0 25 0 89419.0 + 27515 PKLPWEIP 8 125 490.2841201933416 0 490.2844421267509 PEAK CID FTMS 0 0 0 4642 214172.890625 0.7347138226313725 -2 0.019876480102539 1 Unmodified _PKLPWEIP_ REV__ENST00000262982.2_1_20:47679879-47682789:+|nuORF 9.347437153973935 0.5488964601725408 4 ES 2 -1 12.206 0.0 0.0 1.2474 0.0 0.0 150.18327837320822 609.2665499322874 759.4498283054957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 ES 1.2474 - 83 + 1 2.928 136059.1 0.8199999928474426 902 3739 4642 HBL1_DMSO_200M_050219_2,4643 HBL1_DMSO_200M_050219_2,4643,PKLPWEIP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4644 22.747 104.0 1782200.0 25 0 245510.0 + 1344 AKPSRNPP 8 117 433.74566577361406 865.4767786140281 2 433.7457763552666 MULTI CID FTMS 0 0 0 4642 799469.75 0.1282262060014701 -6 0.1061935424804687 2 Unmodified _AKPSRNPP_ REV__ENST00000508652.5_1_4:164415907-164436651:+|nuORF 24.020572477871973 0.5389365498350341 4 [VG]PTQGTAA 9 -1 51.761 0.0 0.0 5.9807 0.0 0.0 0.0 80.05132471256093 80.05132471256093 24.058167323414764 0.0 0.0 0.0 0 1.0172203223519531 1.6989700043360187 0.6694451763165201 0.0 [VG]PTQGTAA 5.9807 - 967 + 1 2.928 147431.7 1.0 903 3739 4642 HBL1_DMSO_200M_050219_2,4644 HBL1_DMSO_200M_050219_2,4644,AKPSRNPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4645 22.76 800.0 151060.0 25 0 21465.0 26833 PARTPAPAP 9 139 439.24821536551366 876.4818777978273 2 439.2481872439384 MULTI CID FTMS 0 0 0 4642 105576.75 0.0373704422841979 -12 0.1590557098388672 3 Unmodified _PARTPAPAP_ ENSG00000169733|ENST00000310496|RFNG;ENST00000582478.5_1_17:80008786-80009642:-|nuORF 30.63653989081413 0.1413794767160703 4 AAPP[VS]APAP 10 5 AAPP[VS]A + + 29.425 10.127 1.7068 3.3571 3.3571 46.792 0.0 0.0 0.0 0.0 15.645175753807465 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 AAPP[VS]APAP 3.3571 - 354 + 1 2.928 96405.7 0.699999988079071 904 3739 4642 HBL1_DMSO_200M_050219_2,4645 HBL1_DMSO_200M_050219_2,4645,PARTPAPAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4646 22.768 412.0 123150.0 25 0 21410.0 + 37731 TLQLNVYP 8 86 474.2615532961072 946.5085536590144 2 474.2625610232353 MULTI CID FTMS 0 0 0 4642 87718.65625 0.013563551748982 42 -0.7253532409667969 4 Unmodified _TLQLNVYP_ REV__ENSG00000054983|ENST00000261304|GALC;REV__nc|ENSG00000054983|P54803-3|GALC;REV__nc|ENSG00000054983|P54803-4|GALC;REV__nc|ENSG00000054983|P54803-5|GALC 12.531546534597751 0.7257836412119636 4 [{I|L}T][YN][Q{I|L}]VP 8 -1 + 31.884 0.0 0.0 3.3686 3.3686 77.851 0.0 0.0 0.0 13.300756084811807 2.196552685394799 2.196552685394799 12.222735112716446 0 0.0 2.0 0.0 0.0 [{I|L}T][YN][Q{I|L}]VP;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VS[QA][VP];[{I|L}T][Q{I|L}][YN][VP] 3.3686;2.0773;1.7056 -;-;- 90 + 1 2.928 45150.2 1.0 905 3739 4642 HBL1_DMSO_200M_050219_2,4646 HBL1_DMSO_200M_050219_2,4646,TLQLNVYP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4648 22.779 532.0 161310.0 25 0 23455.0 + -1 LTGWPLTMK 9 84 531.7847735931227 1061.5549942530454 2 531.7849609255791 MULTI CID FTMS 0 0 0 4647 181125.203125 0.413922587707427 -6 0.1067256927490234 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 24.020572477871973 0.2255576514309169 4 KTE[RV][HT]K 8 -1 36.164 0.0 0.0 3.4067 0.0 0.0 63.9968696119276 0.0 63.9968696119276 0.0 21.38743756437101 0.0 0.0 0 0.5 0.0 1.3494850021680094 0.3054621874040891 KTE[RV][HT]K 3.4067 - 286 + 1 2.928 70329.9 1.0 906 3740 4647 HBL1_DMSO_200M_050219_2,4648 HBL1_DMSO_200M_050219_2,4648,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4649 22.789 533.0 417660.0 25 0 69485.0 + 40187 VGPSYRGLG 9 116 453.2457380602979 904.476923187396 2 453.2455627322197 MULTI CID FTMS 0 0 0 4647 178452.140625 0.58044017133676 -2 0.0430908203125 2 Unmodified _VGPSYRGLG_ REV__ENST00000532681.5_1_11:45940000-45940354:-|nuORF 42.09456458481378 0.0639583784996157 4 PKDYRQV 7 -1 + 70.358 0.0 0.0 7.7789 7.7789 93.458 0.0 0.0 0.0 27.08227553587824 13.213454094728782 13.213454094728782 12.21778700365823 0 1.3494850021680094 0.0 0.0 1.6298545532927078 PKDYRQV;PKDYR[AG]V;PKDV[YG]QV;PV[SG]YRQV;VP[SG]YRQV;PKVD[YG]QV;PKVKP{[CA]|SS}Y;PV[SG]YR[AG]V;VP[SG]YR[AG]V;PKD[PG][KT]Y 7.7789;6.4281;6.1599;5.4407;5.433;5.3088;4.1672;4.0975;4.0897;4.0878 -;-;-;-;-;-;-;-;-;- 508 + 1 2.928 172060.5 1.0 907 3740 4647 HBL1_DMSO_200M_050219_2,4649 HBL1_DMSO_200M_050219_2,4649,VGPSYRGLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4650 22.802 800.0 106040.0 25 0 10253.0 + -1 NSEDMCLIY 9 104 572.7345533947582 0 572.7346679568291 PEAK CID FTMS 0 0 0 4647 118060.1171875 0.5985016482890634 -5 0.0882854461669921 3 Carbamidomethyl (C) _NSEDMC(Carbamidomethyl (C))LIY_ REV__ENSG00000143727|ENST00000272065|ACP1;REV__ENST00000453390.5_1_2:271872-277301:+|nuORF;REV__ENST00000480874.5_1_2:264964-275202:+|nuORF;REV__ENST00000484464.5_1_2:265208-277301:+|nuORF;REV__nc|ENSG00000143727|P24666-2|ACP1;REV__nc|ENSG00000143727|P24666-3|ACP1 4.3292370932331545 0.3444685223463734 4 VE 2 -1 7.7351 0.0 0.0 0.67647 0.0 0.0 102.0185901756998 810.3064581211257 912.3250482968256 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5796896906561032 0.0 VE 0.67647 - 92 + 1 2.928 68046.4 0.4900000095367431 908 3740 4647 HBL1_DMSO_200M_050219_2,4650 HBL1_DMSO_200M_050219_2,4650,NSEDMCLIY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4651 22.816 800.0 229530.0 25 0 18172.0 + 3298 AYIKSSKEV 9 197 342.19210788745573 0 342.1917907595634 PEAK CID FTMS 0 0 0 4647 80270.0078125 0.8504768792430987 -3 0.0591201782226562 4 Unmodified _AYIKSSKEV_ ENSG00000092931|ENST00000685175|MFSD11;nc|ENSG00000092931|O43934-2|MFSD11 8.444304893310646 0.3301165646208756 4 S 1 8 7.232 0.0 0.0 1.0598 0.0 0.0 134.0885544675343 458.22821985416255 592.3167743216968 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + S 1.0598 + + 27 + 1 2.928 149147.8 0.8600000143051147 909 3740 4647 HBL1_DMSO_200M_050219_2,4651 HBL1_DMSO_200M_050219_2,4651,AYIKSSKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4653 22.82 0.88 72604000.0 25 0 10473000.0 + 17672 KPTGARPSAL 10 65 499.2931762711508 996.5717996091016 2 499.2935974001884 MULTI CID FTMS 0 0 0 4652 92573176.0 0.551994592081584 -4 0.1074028015136718 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 18.373094154950223 0.5392593366289069 4 KPTG 4 6 45.433 0.0 0.0 4.5589 0.0 0.0 0.0 610.3333834283811 610.3333834283811 32.96888087077029 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPTG 4.5589 + + 40 + 1 2.904 54349.7 1.0 910 3741 4652 HBL1_DMSO_200M_050219_2,4653 HBL1_DMSO_200M_050219_2,4653,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4654 22.822 6.9 8436000.0 25 0 1264100.0 + 4219 DAPKDYRQV 9 71 364.5210793906279 1090.5414087720835 3 364.5208007693291 MULTI CID FTMS 0 0 0 4652 9769533.0 0.7877810686434439 -3 0.0913734436035156 2 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 41.8396318013385 0.0653578398400075 4 {[DA]|[EG]}PKDY 6 3 57.224 0.0 0.0 5.2473 0.0 0.0 0.0 398.2177218072876 398.2177218072876 38.01538440272459 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.805462187404089 + {[DA]|[EG]}PKDY 5.2473 + + 40 + 1 2.904 55637.5 1.0 911 3741 4652 HBL1_DMSO_200M_050219_2,4654 HBL1_DMSO_200M_050219_2,4654,DAPKDYRQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4655 22.829 433.0 155430.0 25 0 7139.1 + 14161 IDCYEIIEK 9 91 563.2799647581127 1124.5453765830252 2 563.2800170779228 MULTI CID FTMS 0 0 0 4652 202233.734375 0.4840954160585689 -2 0.0875263214111328 3 Unmodified _IDCYEIIEK_ ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-2|COL12A1 37.97399986684836 0.0865783450051559 4 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK 10 6 + 89.875 0.0 0.0 7.9921 7.9921 90.968 0.0 0.0 0.0 77.10581543087943 19.58674701179433 19.58674701179433 9.164539485499247 0 2.548455006504028 0.0 0.7742275032520141 0.805462187404089 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HVDAAEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AADVA{M(Oxidation (M))|F}EK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{M(Oxidation (M))|F}VDAAEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AADV{M(Oxidation (M))|F}AEK;{NN|[MP]|[D{I|L}]|[EV]}QHVD[RD]K;{NN|[MP]|[D{I|L}]|[EV]}QH{[RE]|[WV]}AEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HVD[RD]K;{NN|[MP]|[D{I|L}]|[EV]}[AG]H{[RE]|[WV]}AEK;{NN|[MP]|[D{I|L}]|[EV]}QHVDAT{[QV]|[N{I|L}]|[RA]|[KV]} 7.9921;7.1772;6.2364;6.1264;6.1264;5.5704;5.4569;4.7516;4.6381;4.345 -;-;-;-;-;-;-;-;-;- 650 + 1 2.904 56437.0 1.0 912 3741 4652 HBL1_DMSO_200M_050219_2,4655 HBL1_DMSO_200M_050219_2,4655,IDCYEIIEK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4656 22.839 559.0 417070.0 25 0 67632.0 + 17543 KPNKGGGSKF 10 113 510.28342171719686 1018.5522905011936 2 510.7844726443291 MULTI CID FTMS 0 0 0 4652 176820.9375 0.7187473661954236 -2 0.0875263214111328 4 Unmodified _KPNKGGGSKF_ REV__ENST00000484302.3_1_17:46675596-46681926:-|nuORF 18.1463463914782 0.5430639438673815 4 {I|L}K 2 -1 17.959 0.0 0.0 1.7632 0.0 0.0 0.0 774.3531588190061 774.3531588190061 2.2454626555970947 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 {I|L}K 1.7632 - 556 + 1 2.904 183611.8 1.0 913 3741 4652 HBL1_DMSO_200M_050219_2,4656 HBL1_DMSO_200M_050219_2,4656,KPNKGGGSKF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4657 22.847 455.0 269120.0 25 0 60203.0 + -1 KQYMQEYQ 8 69 567.2504021478792 1132.4862513625585 2 567.2490722537041 MULTI CID FTMS 0 0 0 4652 165385.484375 0.4151701250216711 -3 0.0913734436035156 5 Oxidation (M) _KQYM(Oxidation (M))QEYQ_ REV__ENSG00000044459|ENST00000380647|CNTLN;REV__nc|ENSG00000044459|Q9NXG0|CNTLN 2.302733041254933 0.8103549651115762 4 H 1 -1 3.4949 0.0 0.0 0.3086 0.0 0.0 641.2537207002521 351.1391695611938 992.392890261446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.3086 - 4 + 1 2.904 96941.8 1.0 914 3741 4652 HBL1_DMSO_200M_050219_2,4657 HBL1_DMSO_200M_050219_2,4657,KQYMQEYQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4658 22.856 489.0 346300.0 25 0 78035.0 5349 DLHSEAWFL 9 105 559.2668528925998 1116.5191528519997 2 559.2681762576103 MULTI CID FTMS 0 0 0 4652 154328.96875 0.5080653192404319 -5 0.1110858917236328 6 Unmodified _DLHSEAWFL_ ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4 4.3292370932331545 0.7635526921153418 4 {[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQWP 8 8 {[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQW + + 10.181 -7.9716 -0.796 0.91186 0.91186 44.234 0.0 0.0 0.0 0.0 -0.3741124152260884 -0.3741124152260884 0.0 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQWP 0.91186 - 107 + 1 2.904 130123.2 1.0 915 3741 4652 HBL1_DMSO_200M_050219_2,4658 HBL1_DMSO_200M_050219_2,4658,DLHSEAWFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4659 22.87 800.0 72658.0 25 0 4173.8 -1 IMAPNPDDME 10 94 574.7339416029288 1147.4533302726577 2 575.2362548708916 MULTI CID FTMS 0 0 0 4652 131064.1171875 0.658442322718476 -5 0.1110858917236328 7 Oxidation (M) _IMAPNPDDM(Oxidation (M))E_ ENSG00000115825|ENST00000234179|PRKD3 3.944395688203298 0.708391353636983 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}M[WK]S 8 -1 17.369 0.0 0.0 1.5137 0.0 0.0 0.0 167.9755083544409 167.9755083544409 10.9151498112135 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}M[WK]S 1.5137 - 67 1 2.904 47977.5 0.5699999928474426 916 3741 4652 HBL1_DMSO_200M_050219_2,4659 HBL1_DMSO_200M_050219_2,4659,IMAPNPDDME False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4660 22.88 603.0 706910.0 25 0 150760.0 34573 SPGRPGKP 8 171 398.2272600825909 0 398.2270690798759 PEAK CID FTMS 0 0 0 4652 129154.6796875 0.411346918264483 -2 0.0875263214111328 8 Unmodified _SPGRPGKP_ ENST00000470811.5_1_3:156544101-156697065:+|nuORF 23.1484247019978 0.3584660196589264 4 PTD 3 7 32.329 0.0 0.0 4.0694 0.0 0.0 128.09335858417575 350.1888216608032 478.2821802449789 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.110924374808178 0.0 PTD 4.0694 - 678 + 1 2.904 328525.4 1.0 917 3741 4652 HBL1_DMSO_200M_050219_2,4660 HBL1_DMSO_200M_050219_2,4660,SPGRPGKP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4662 22.884 2.2 27552000.0 25 0 4302400.0 + 12818 GVTFVHPKL 9 78 333.1980830866818 996.5724198602454 3 333.1978332400322 MULTI CID FTMS 0 0 0 4661 31303068.0 0.792328119869672 -3 0.15142822265625 1 Unmodified _GVTFVHPKL_ REV__ENSG00000278259|ENST00000614623|MYO19;REV__nc|ENSG00000278259|Q96H55-2|MYO19;REV__nc|ENSG00000278259|Q96H55-3|MYO19;REV__nc|ENSG00000278259|Q96H55-4|MYO19 21.74664581756881 0.2544899275067181 4 [KP]{[QG]|[NA]}TTPR{I|L} 9 -1 + 39.147 0.0 0.0 3.9282 3.9282 66.533 0.0 0.0 0.0 6.425449767853316 22.848265625289848 6.425449767853316 1.5186375580366729 0 0.0 0.0 0.3807196863200844 0.4247425010840047 [KP]{[QG]|[NA]}TTPR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GTPK{I|L};[KP][WQ]TPK{I|L};[KP]{[QG]|[NA]}E{[VA]|[{I|L}G]}R{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{[VA]|[{I|L}G]}R{I|L};[KP]{[QG]|[NA]}E[RV]A{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[RV]A{I|L};{[VA]|[{I|L}G]}V{[QN]|[E{I|L}]|[KN]}TPR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QV]|[N{I|L}]|[RA]|[KV]}R{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]KA{I|L} 3.9282;3.7758;3.6045;2.8275;2.6508;2.5254;2.3487;2.2937;2.0007;1.998 -;-;-;-;-;-;-;-;-;- 278 1 2.904 57155.7 1.0 918 3742 4661 HBL1_DMSO_200M_050219_2,4662 HBL1_DMSO_200M_050219_2,4662,GVTFVHPKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4663 22.885 7.5 7906600.0 25 0 1185300.0 + 4224 DAPKDYRQV 9 54 546.2775250394335 1090.540497145667 2 546.2777587771416 MULTI CID FTMS 0 0 0 4661 9358188.0 0.86433085898427 -1 0.0639019012451171 2 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 18.373094154950223 0.3393451798331396 4 DAPKD 5 4 62.251 0.0 0.0 5.7082 0.0 0.0 0.0 561.2802050900422 561.2802050900422 41.28144697160131 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.0 + DAPKD 5.7082 + + 35 + 1 2.904 52291.3 1.0 919 3742 4661 HBL1_DMSO_200M_050219_2,4663 HBL1_DMSO_200M_050219_2,4663,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4664 22.889 158.0 967080.0 25 0 143380.0 + -1 EKLSFHMK 8 88 518.2662650599325 1034.517977186665 2 518.2664062380791 MULTI CID FTMS 0 0 0 4661 643315.75 0.6962545980440303 -5 0.171304702758789 3 Oxidation (M) _EKLSFHM(Oxidation (M))K_ REV__ENSG00000125651|ENST00000394456|GTF2F1;REV__ENST00000594213.5_1_19:6380294-6381826:-|nuORF 4.75600775471527 0.7954636275367004 4 K 1 -1 12.218 0.0 0.0 1.1811 0.0 0.0 888.4116672274837 0.0 888.4116672274837 0.0 4.771212547196624 0.0 0.0 0 0.0 0.0 0.0 0.0 K 1.1811 + + 20 + 1 2.904 122552.2 1.0 920 3742 4661 HBL1_DMSO_200M_050219_2,4664 HBL1_DMSO_200M_050219_2,4664,EKLSFHMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4665 22.892 168.0 412820.0 25 0 95156.0 + 5015 DGVPSKNTV 9 77 458.74032340532807 915.4660938774562 2 458.7406799197197 MULTI CID FTMS 0 0 0 4661 401877.53125 0.5030617727018495 4 -0.0790004730224609 4 Unmodified _DGVPSKNTV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000510321.1_1_4:146044588-146044753:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 34.40172386719151 0.1061884637610825 4 GSPNTV[RD] 8 6 30.443 0.0 0.0 3.3254 0.0 0.0 71.07445723701328 0.0 71.07445723701328 0.0 4.941774646866506 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.0 GSPNTV[RD] 3.3254 - 210 1 2.904 61818.3 1.0 921 3742 4661 HBL1_DMSO_200M_050219_2,4665 HBL1_DMSO_200M_050219_2,4665,DGVPSKNTV True True DGVPSKNTV 22.89186 458.74067991972 32808108.0 4661.0 ENST00000510321.1_1_4:146044588-146044753:+|nuORF;;ENST00000515678.5_1_4:146042303-146044753:+|nuORF;;ENSG00000164163|ENST00000296577|ABCE1 6.581056118011475 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4666 22.905 779.0 221090.0 25 0 18928.0 + 17708 KPTMSLPLPA 10 112 527.8035861404157 1053.5926193476314 2 527.8044921755791 MULTI CID FTMS 0 0 0 4661 283408.0 0.899507867396954 -5 0.171304702758789 5 Unmodified _KPTMSLPLPA_ REV__ENST00000234313.7_1_2:68623094-68623172:+|nuORF 29.081581746732265 0.3152867722954398 4 KPTG 4 -1 49.993 0.0 0.0 4.745 0.0 0.0 0.0 667.3537876846505 667.3537876846505 33.73376226923302 0.0 0.0 0.0 0 1.0 0.0 0.805462187404089 0.0 KPTG 4.745 - 212 + 1 2.904 136148.4 1.0 922 3742 4661 HBL1_DMSO_200M_050219_2,4666 HBL1_DMSO_200M_050219_2,4666,KPTMSLPLPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4667 22.908 135.0 611530.0 25 0 196410.0 -1 LSVHEVVEKQ 10 72 403.887806312762 1208.641589538486 3 403.8878661990166 MULTI CID FTMS 0 0 0 4661 277572.125 0.067929951704565 73 -1.3400611877441406 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSVHEVVEKQ_ ENST00000342315.8_1_12:113424985-113425036:+|nuORF 9.38312468134398 0.6832340498775793 4 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 -1 38.785 0.0 0.0 3.209 0.0 0.0 0.0 394.2221884087184 394.2221884087184 25.290456128172 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 3.209 - 113 + 1 2.904 69070.4 1.0 923 3742 4661 HBL1_DMSO_200M_050219_2,4667 HBL1_DMSO_200M_050219_2,4667,LSVHEVVEKQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4669 22.925 800.0 155800.0 25 0 21072.0 -1 0 56 1133.1460373975954 3396.4162827929863 3 1133.482714831829 MULTI CID FTMS 0 0 0 4668 222477.625 0.5282002341379132 -3 0.1400642395019531 1 4 YG 2 -1 8.5835 0.0 0.0 0.25272 0.0 0.0 1781.6163082830235 1391.7066022134757 3173.3229104964994 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.25272 - 50 + 1 2.852 94262.7 0.75 924 3743 4668 HBL1_DMSO_200M_050219_2,4669 HBL1_DMSO_200M_050219_2,4669, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4670 22.931 295.0 375220.0 25 0 42096.0 -1 0 150 306.1849630821503 610.3553732311007 2 306.1852905154228 MULTI CID FTMS 0 0 0 4668 296823.0 1.0 0 0.0 2 4 KP 2 -1 27.613 0.0 0.0 4.5241 0.0 0.0 0.0 382.1859550132537 382.1859550132537 17.935333374159633 0.0 0.0 0.0 0 0.6643943297944485 0.0 0.0 0.0 KP 4.5241 - 59 + 1 2.852 90427.1 1.0 925 3743 4668 HBL1_DMSO_200M_050219_2,4670 HBL1_DMSO_200M_050219_2,4670, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4671 22.937 372.0 164840.0 25 0 29392.0 + + 17471 KPTALSAPR 9 67 470.7823711559765 939.550189378753 2 470.7821227908134 MULTI CID FTMS 0 0 0 4668 211665.140625 0.5989971177182856 -6 0.1991844177246093 3 Unmodified _KPEPLLMI_ ENSG00000172081|ENST00000357066|MOB3A 16.942295170755138 0.6606234159769251 4 KPTA 4 -1 39.68 0.0 0.0 4.2233 0.0 0.0 0.0 539.2950533502561 539.2950533502561 24.195925227640984 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 KPTA 4.2233 - 23 + 1 2.852 52858.5 1.0 926 3743 4668 HBL1_DMSO_200M_050219_2,4671 HBL1_DMSO_200M_050219_2,4671,KPEPLLMI False False KPTALSAPR 22.937187 470.782122790813 2785356.5 4668.0 ENSG00000172081|ENST00000357066|MOB3A 1.1342674444119136 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4673 22.941 14.0 2261000.0 25 0 258690.0 35516 STMSTNGIPR 10 55 540.2609941854893 1078.5074354377784 2 540.2612792849541 MULTI CID FTMS 0 0 0 4672 4542123.5 0.6551553387758405 3 -0.0653400421142578 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 40.23920728925047 0.1550410903091231 4 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 10 2 + 55.935 0.0 0.0 5.1863 5.1863 70.389 0.0 0.0 0.0 7.269987279362624 0.9691001300805624 0.9691001300805624 0.9691001300805624 0 0.805462187404089 0.0 0.4247425010840047 0.4247425010840047 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR 5.1863;5.0965;4.3366;4.2467 -;+;-;- + 79 + 1 2.852 30438.1 1.0 927 3744 4672 HBL1_DMSO_200M_050219_2,4673 HBL1_DMSO_200M_050219_2,4673,STMSTNGIPR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4674 22.947 314.0 237210.0 25 0 14710.0 -1 WLDMVNEK 8 92 525.7501934773225 1049.4858340214448 2 526.2515746951103 MULTI CID FTMS 0 0 0 4672 315348.75 1.0 0 0.0 2 Oxidation (M) _WLDM(Oxidation (M))VNEK_ ENSG00000096070|ENST00000357641|BRPF3;nc|ENSG00000096070|Q9ULD4-2|BRPF3;nc|ENSG00000096070|Q9ULD4-3|BRPF3 4.3292370932331545 0.7980541185046766 4 EK 2 -1 16.454 0.0 0.0 1.5678 0.0 0.0 774.3254393615146 0.0 774.3254393615146 0.0 5.211440694835829 0.0 0.0 0 0.0 0.0 0.0 0.0 EK 1.5678 + + 44 1 2.852 61553.7 1.0 928 3744 4672 HBL1_DMSO_200M_050219_2,4674 HBL1_DMSO_200M_050219_2,4674,WLDMVNEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4676 22.953 44.0 1301400.0 25 0 169970.0 -1 LKFLQMAL 8 70 327.1938741422845 0 327.1940490603447 PEAK CID FTMS 0 0 0 4675 1415077.875 1.0 0 0.0 1 Oxidation (M) _LKFLQM(Oxidation (M))AL_ ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213 10.823927491677226 0.5322985476678564 4 Q 1 -1 3.0989 0.0 0.0 0.47503 0.0 0.0 141.08439027500032 380.19953333072505 521.2839236057254 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.47503 + + 14 + 1 2.852 52424.7 1.0 929 3745 4675 HBL1_DMSO_200M_050219_2,4676 HBL1_DMSO_200M_050219_2,4676,LKFLQMAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4677 22.959 349.0 317780.0 25 0 43766.0 + 23978 LVTKNSKIE 9 105 344.54193577184344 1030.6039779157304 3 344.5422546267509 MULTI CID FTMS 0 0 0 4675 275819.78125 0.9109232251115068 13 -0.3691825866699219 2 Unmodified _LVTKNSKIE_ REV__ENSG00000167604|ENST00000606253|NFKBID;REV__nc|ENSG00000167604|Q8NI38-3|NFKBID;REV__nc|ENSG00000167604|Q8NI38|NFKBID 19.256988751693697 0.3154191944385105 4 {I|L}E 2 -1 20.969 0.0 0.0 2.0346 0.0 0.0 770.4541586731078 0.0 770.4541586731078 0.0 9.710040265111566 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E 2.0346 + + 28 1 2.852 95737.5 1.0 930 3745 4675 HBL1_DMSO_200M_050219_2,4677 HBL1_DMSO_200M_050219_2,4677,LVTKNSKIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4679 22.975 800.0 245940.0 25 0 21630.0 36325 SYMKLTKAL 9 221 352.2050071102783 1053.5931919310349 3 352.2049133181572 MULTI CID FTMS 0 0 0 4678 161881.390625 0.5393320480107345 -1 0.0118770599365234 1 Unmodified _SYMKLTKAL_ ENSG00000184207|ENST00000333503|PGP 19.256988751693697 0.3154191944385105 4 DHHPKA{I|L} 7 6 40.282 0.0 0.0 3.8233 0.0 0.0 237.1734791486344 0.0 237.1734791486344 0.0 16.342208331585354 0.0 0.0 0 0.1595680409956017 0.0 1.2803695511246982 0.0 DHHPKA{I|L} 3.8233 - 1203 1 2.852 156416.1 0.9399999976158142 931 3746 4678 HBL1_DMSO_200M_050219_2,4679 HBL1_DMSO_200M_050219_2,4679,SYMKLTKAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4680 22.989 800.0 88621.0 25 0 8171.9 -1 0 90 732.8167145693812 2927.237752411125 4 733.3185912966728 MULTI CID FTMS 0 0 0 4678 228621.25 0.9722476292603228 -4 0.0790004730224609 2 4 N 1 -1 6.9897 0.0 0.0 0.23878 0.0 0.0 1315.470746376698 1494.6754285137677 2810.1461748904658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.23878 - 52 + 1 2.852 56010.8 0.9900000095367432 932 3746 4678 HBL1_DMSO_200M_050219_2,4680 HBL1_DMSO_200M_050219_2,4680, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4681 23.002 800.0 95116.0 25 0 15092.0 -1 AKKSQDFCC 9 83 543.7367341056075 1085.458915278015 2 543.7369872927666 MULTI CID FTMS 0 0 0 4678 128189.8671875 1.0 0 0.0 3 Carbamidomethyl (C) _AKKSQDFC(Carbamidomethyl (C))C_ ENSG00000198833|ENST00000435041|UBE2J1 4.3292370932331545 0.7635526921153418 4 SPG 3 -1 16.198 0.0 0.0 1.4923 0.0 0.0 110.0059140487518 731.3075456329944 841.3134596817463 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SPG 1.4923 - 54 + 1 2.852 63228.2 0.8600000143051147 933 3746 4678 HBL1_DMSO_200M_050219_2,4681 HBL1_DMSO_200M_050219_2,4681,AKKSQDFCC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4683 23.007 13.0 8246300.0 25 0 1280200.0 + 22 AAALGPGPGR 10 103 433.74566577361406 865.4767786140281 2 433.7457458376884 MULTI CID FTMS 0 0 0 4682 4984576.0 0.7994714859517623 2 -0.0806045532226562 1 Unmodified _AAALGPGPGR_ REV__ENST00000423469.6_1_8:144917834-144920143:-|nuORF;REV__nc|ENSG00000185189|Q9NSY0-2|NRBP2;REV__nc|ENSG00000185189|Q9NSY0-4|NRBP2 19.256988751693697 0.5244284437930726 4 [VG]PTQGTAA 9 -1 48.611 0.0 0.0 5.6167 0.0 0.0 0.0 80.0514391534789 80.0514391534789 22.64190937653879 0.0 0.0 0.0 0 1.0044321917401078 1.6989700043360187 0.3494850021680094 0.0 [VG]PTQGTAA 5.6167 - 458 + 1 2.802 92494.3 1.0 934 3747 4682 HBL1_DMSO_200M_050219_2,4683 HBL1_DMSO_200M_050219_2,4683,AAALGPGPGR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4684 23.008 45.0 991900.0 25 0 332020.0 26834 PARTPAPAP 9 67 439.24821536551366 876.4818777978273 2 439.2484619021416 MULTI CID FTMS 0 0 0 4682 1462365.375 0.517625716313932 -4 0.0944557189941406 2 Unmodified _PARTPAPAP_ ENSG00000169733|ENST00000310496|RFNG;ENST00000582478.5_1_17:80008786-80009642:-|nuORF 24.020572477871973 0.2255576514309169 4 AP 2 7 30.969 0.0 0.0 3.5333 0.0 0.0 690.3806337566149 0.0 690.3806337566149 0.0 20.37316809148452 0.0 0.0 0 1.0 0.0 0.0 0.0 + AP 3.5333 + + 31 + 1 2.802 40000.9 1.0 935 3747 4682 HBL1_DMSO_200M_050219_2,4684 HBL1_DMSO_200M_050219_2,4684,PARTPAPAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4685 23.013 274.0 433630.0 25 0 62312.0 -1 0 42 1146.8024150018894 3437.3854156058683 3 1147.138232409954 MULTI CID FTMS 0 0 0 4682 784443.3125 0.6995024657683273 4 -0.105560302734375 3 4 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.27532 0.0 0.0 1797.6265787912182 1432.6720167678716 3230.29859555909 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.27532 - 32 + 1 2.802 92181.6 1.0 936 3747 4682 HBL1_DMSO_200M_050219_2,4685 HBL1_DMSO_200M_050219_2,4685, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4686 23.027 800.0 93920.0 25 0 33056.0 + 12011 GPPSVAGVISV 11 89 491.78177309860087 0 491.7809020876884 PEAK CID FTMS 0 0 0 4682 157429.984375 0.8660534836764848 4 -0.105560302734375 4 Unmodified _GPPSVAGVISV_ REV__ENSG00000114573|ENST00000273398|ATP6V1A;REV__nc|ENSG00000114573|P38606-2|ATP6V1A 5.731851221503515 0.47618401536486 4 N 1 -1 2.4743 0.0 0.0 0.25208 0.0 0.0 652.4178419962268 212.0692537897094 864.4870957859362 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.25208 - 6 + 1 2.802 64974.0 0.8500000238418579 937 3747 4682 HBL1_DMSO_200M_050219_2,4686 HBL1_DMSO_200M_050219_2,4686,GPPSVAGVISV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4687 23.041 800.0 71849.0 25 0 8993.4 + 27238 PGPLCLFLRHS 11 69 620.3390380740166 0 620.3390380740166 PEAK CID FTMS 0 0 0 -1 0 5 Unmodified _PGPLCLFLRHS_ REV__ENST00000323571.8_1_17:38435755-38435857:+|nuORF 5.296884461304476 0.47618401536486 4 KP 2 -1 14.776 0.0 0.0 1.1929 0.0 0.0 242.08916381232672 768.4082596650985 1010.4974234774252 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 KP 1.1929 - 6 + 1 2.802 48488.6 0.7699999809265137 938 3747 4682 HBL1_DMSO_200M_050219_2,4687 HBL1_DMSO_200M_050219_2,4687,PGPLCLFLRHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4689 23.055 750.0 177070.0 25 0 19527.0 + -1 LTGWPLTMK 9 114 531.7847735931227 1061.5549942530454 2 532.2861816287041 MULTI CID FTMS 0 0 0 4688 110231.6796875 0.4278362400528674 1 -0.0425071716308593 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 27.628801355627647 0.1796483985696185 4 KTT[KQ][HQ]K 8 -1 39.901 0.0 0.0 3.7587 0.0 0.0 63.9965354184812 0.0 63.9965354184812 0.0 25.124562618571247 0.0 0.0 0 1.305462187404089 0.0 1.0 0.8252574989159953 KTT[KQ][HQ]K 3.7587 - 527 + 1 2.802 108151.0 1.0 939 3748 4688 HBL1_DMSO_200M_050219_2,4689 HBL1_DMSO_200M_050219_2,4689,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4690 23.069 800.0 213110.0 25 0 85442.0 17510 KPHISSTPL 9 119 490.2841201933416 0 490.2862121462822 PEAK CID FTMS 0 0 0 4688 214745.046875 0.7366765878737578 7 -0.2440261840820312 2 Unmodified _KPHISSTPL_ ENSG00000040199|ENST00000568954|PHLPP2;nc|ENSG00000040199|Q6ZVD8-3|PHLPP2 15.847184025352805 0.2451986057151378 4 PT[QA][{M(Oxidation (M))|F}V]P 7 7 17.58 0.0 0.0 1.7965 0.0 0.0 110.07477728526904 125.07271753482657 235.1474948200956 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.9247425010840048 0.0 PT[QA][{M(Oxidation (M))|F}V]P 1.7965 - 18 + 1 2.802 135172.8 0.9900000095367432 940 3748 4688 HBL1_DMSO_200M_050219_2,4690 HBL1_DMSO_200M_050219_2,4690,KPHISSTPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4691 23.083 800.0 168470.0 25 0 42470.0 + 6464 EAFQHRSV 8 122 487.2466753880345 0 487.2467224001884 PEAK CID FTMS 0 0 0 4688 125636.578125 0.6695970496475446 4 -0.1160755157470703 3 Unmodified _EAFQHRSV_ ENSG00000166888|ENST00000300134|STAT6;ENST00000555222.5_1_12:57492966-57496222:-|nuORF;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6 43.77239144664712 0.1231116967533236 4 A{M(Oxidation (M))|F}QHR 5 3 24.297 0.0 0.0 2.4984 0.0 0.0 129.04196100930966 201.0889071100219 330.1308681193316 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 + A{M(Oxidation (M))|F}QHR 2.4984 + + 201 + 1 2.802 108009.5 0.800000011920929 941 3748 4688 HBL1_DMSO_200M_050219_2,4691 HBL1_DMSO_200M_050219_2,4691,EAFQHRSV True True EAFQHRSV 23.083086 487.246722400188 1313108.0 4688.0 nc|ENSG00000166888|P42226-3|STAT6;;ENST00000555222.5_1_12:57492966-57496222:-|nuORF;;nc|ENSG00000166888|P42226-2|STAT6;;ENSG00000166888|ENST00000300134|STAT6 7.324161052703857 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4693 23.087 0.51 87961000.0 25 0 13240000.0 + 17614 KPTAAFHLL 9 57 499.2931762711508 996.5717996091016 2 499.2934753298759 MULTI CID FTMS 0 0 0 4692 122146816.0 0.728336055705643 4 -0.1400604248046875 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 4 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.35462563733 667.35462563733 23.66196879911484 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 19 + 1 2.757 40769.4 1.0 942 3749 4692 HBL1_DMSO_200M_050219_2,4693 HBL1_DMSO_200M_050219_2,4693,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4694 23.088 6.8 5733500.0 25 0 846150.0 + 4220 DAPKDYRQV 9 57 364.5210793906279 1090.5414087720835 3 364.5207702517509 MULTI CID FTMS 0 0 0 4692 7769703.5 0.6265217924206516 5 -0.19195556640625 2 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 22.736283301280096 0.2418982879461534 4 {[DA]|[EG]}PKD 5 4 49.833 0.0 0.0 4.5696 0.0 0.0 0.0 561.2814584268671 561.2814584268671 40.88045629527841 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3807196863200844 + {[DA]|[EG]}PKD 4.5696 + + 38 + 1 2.757 39928.8 1.0 943 3749 4692 HBL1_DMSO_200M_050219_2,4694 HBL1_DMSO_200M_050219_2,4694,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4696 23.095 284.0 519790.0 25 0 135080.0 + 17544 KPNKGGGSKF 10 82 510.28342171719686 1018.5522905011936 2 510.2834045290947 MULTI CID FTMS 0 0 0 4695 181582.796875 0.3853226069565171 7 -0.2208232879638672 1 Unmodified _KPNKGGGSKF_ REV__ENST00000484302.3_1_17:46675596-46681926:-|nuORF 13.042465956692816 0.6287021003332052 4 {I|L}{M(Oxidation (M))|F} 2 -1 19.464 0.0 0.0 1.9109 0.0 0.0 0.0 755.3696993463499 755.3696993463499 8.89075625191822 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.9109 - 185 + 1 2.757 117408.0 1.0 944 3750 4695 HBL1_DMSO_200M_050219_2,4696 HBL1_DMSO_200M_050219_2,4696,KPNKGGGSKF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4697 23.108 720.0 184220.0 25 0 38283.0 -1 VGRCCPNDR 9 76 567.2504021478792 1132.4862513625585 2 567.2503539919853 MULTI CID FTMS 0 0 0 4695 302364.96875 0.7590321626623175 6 -0.2168903350830078 2 2 Carbamidomethyl (C) _VGRC(Carbamidomethyl (C))C(Carbamidomethyl (C))PNDR_ ENST00000316423.10_1_4:39523035-39529029:-|nuORF 1.844237919475145 0.850302753031785 4 V 1 -1 9.6777 0.0 0.0 0.85455 0.0 0.0 1015.4066290254474 0.0 1015.4066290254474 0.0 9.193159988825128 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.85455 + + 6 + 1 2.757 102875.8 1.0 945 3750 4695 HBL1_DMSO_200M_050219_2,4697 HBL1_DMSO_200M_050219_2,4697,VGRCCPNDR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4699 23.124 800.0 124000.0 25 0 12176.0 + 12296 GSDLDSEEAEP 11 102 574.7339416029288 1147.4533302726577 2 574.7330810427666 MULTI CID FTMS 0 0 0 4698 143092.203125 0.5443108794050103 7 -0.2084102630615234 1 Unmodified _GSDLDSEEAEP_ REV__ENSG00000170004|ENST00000330494|CHD3;REV__ENST00000572579.1_1_17:7796637-7797935:+|nuORF;REV__nc|ENSG00000170004|Q12873-2|CHD3;REV__nc|ENSG00000170004|Q12873-3|CHD3 2.9952420565917617 0.861016188266951 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M 3 -1 13.161 0.0 0.0 1.1469 0.0 0.0 0.0 769.2908950102656 769.2908950102656 1.1709124234504067 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M 1.1469 - 323 + 1 2.757 82033.9 0.7300000190734863 946 3751 4698 HBL1_DMSO_200M_050219_2,4699 HBL1_DMSO_200M_050219_2,4699,GSDLDSEEAEP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4700 23.129 279.0 345710.0 25 0 59453.0 + 18247 KVIDTQQKV 9 116 529.8138611161634 1057.6131692991266 2 529.8145019412041 MULTI CID FTMS 0 0 0 4698 314574.78125 0.2774311845391592 -2 0.0249557495117187 2 Unmodified _KVIDTQQKV_ ENSG00000113068|ENST00000261813|PFDN1;ENST00000507185.1_1_5:139661015-139682658:-|nuORF 96.0343551737317 0.0125287991338421 4 KV{I|L}DTQQKV 9 0 + 100.97 0.0 0.0 9.5474 9.5474 91.096 0.0 0.0 0.0 75.56825265977153 10.74753464049519 10.74753464049519 7.173917382120706 0 2.917735320183944 0.958607314841775 0.7742275032520141 1.3076556684809653 + + KV{I|L}DTQQKV;KVEVTQQKV;KV{I|L}DTQ[AG]KV;VK{I|L}DTQQKV;KVVETQQKV;KVEVTQ[AG]KV;VKEVTQQKV;VK{I|L}DTQ[AG]KV;KVVETQ[AG]KV;VKVETQQKV 9.5474;8.8691;8.6767;8.43;8.3505;7.9984;7.7517;7.5593;7.4798;7.2331 +;-;-;-;-;-;-;-;-;- + 1448 + 1 2.757 74951.0 1.0 947 3751 4698 HBL1_DMSO_200M_050219_2,4700 HBL1_DMSO_200M_050219_2,4700,KVIDTQQKV True True KVIDTQQKV 23.128892 529.814501941204 11352952.0 4698.0 ENSG00000113068|ENST00000261813|PFDN1;;ENST00000507185.1_1_5:139661015-139682658:-|nuORF 7.70120890935262 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4701 23.143 800.0 203050.0 25 0 47195.0 + 18887 LATSNHQPSY 10 105 559.2668528925998 1116.5191528519997 2 559.2667724490166 MULTI CID FTMS 0 0 0 4698 181647.703125 0.5980011337145302 5 -0.1972484588623047 3 Unmodified _LATSNHQPSY_ REV__ENSG00000112902|ENST00000382496|SEMA5A 4.5288652416199255 0.7056878399829714 4 P 1 -1 9.7539 0.0 0.0 0.8736 0.0 0.0 1001.4550715915487 0.0 1001.4550715915487 0.0 1.0256402619443945 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.8736 + + 99 + 1 2.757 128781.9 0.8199999928474426 948 3751 4698 HBL1_DMSO_200M_050219_2,4701 HBL1_DMSO_200M_050219_2,4701,LATSNHQPSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4702 23.157 800.0 96053.0 25 0 6339.4 + 8118 EPINRTKV 8 113 478.7798231050715 955.545093276943 2 478.7803222537041 MULTI CID FTMS 0 0 0 4698 72436.8984375 0.0607168278269156 -8 0.2000160217285156 4 Unmodified _EPINRTKV_ REV__ENST00000538616.1_1_12:6559812-6560605:-|nuORF 36.12702656103203 0.299085846329477 4 EP{I|L} 3 -1 35.802 0.0 0.0 3.7468 0.0 0.0 0.0 613.3422932506955 613.3422932506955 17.61484602226524 0.0 0.0 0.0 0 0.2614393726401688 1.3010299956639813 0.0 0.0 EP{I|L} 3.7468 + + 109 + 1 2.757 65487.2 0.6100000143051147 949 3751 4698 HBL1_DMSO_200M_050219_2,4702 HBL1_DMSO_200M_050219_2,4702,EPINRTKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4704 23.161 3.3 14658000.0 25 0 2120800.0 + 27143 PFPLGTPRL 9 78 333.1980830866818 996.5724198602454 3 333.1978942751884 MULTI CID FTMS 0 0 0 4703 13947277.0 0.3530267308850212 7 -0.1637420654296875 1 Unmodified _PFPLGTPRL_ REV__ENST00000595775.5_1_19:42817488-42818494:+|nuORF 21.74664581756881 0.2544899275067181 4 [KP][WQ]TPK{I|L} 8 -1 + 36.661 0.0 0.0 3.6787 3.6787 79.561 0.0 0.0 0.0 1.0822685886482477 18.74220950028501 1.0822685886482477 15.217750408754608 0 0.3807196863200844 0.0 0.6747425010840047 0.3252574989159953 [KP][WQ]TPK{I|L};[KP][WQ]VA[VG]{I|L};[KP][WQ][KP]T{I|L};[KP][WQ]V[VG]A{I|L} 3.6787;2.1517;1.9495;1.6729 -;-;-;- 90 1 2.722 45688.4 1.0 950 3752 4703 HBL1_DMSO_200M_050219_2,4704 HBL1_DMSO_200M_050219_2,4704,PFPLGTPRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4705 23.162 18.0 2877500.0 25 0 398660.0 + 4225 DAPKDYRQV 9 64 546.2775250394335 1090.540497145667 2 546.2777587771416 MULTI CID FTMS 0 0 0 4703 2906621.5 0.2684582376243293 9 -0.1714935302734375 2 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 15.248480904072842 0.4239247793462406 4 DAPKD 5 4 58.443 0.0 0.0 5.3591 0.0 0.0 0.0 561.2806097675632 561.2806097675632 37.47425010840047 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + DAPKD 5.3591 + + 33 + 1 2.722 45274.0 1.0 951 3752 4703 HBL1_DMSO_200M_050219_2,4705 HBL1_DMSO_200M_050219_2,4705,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4706 23.164 83.0 876330.0 25 0 127220.0 + -1 IQRLETMK 8 77 517.786203734916 1033.5578545366318 2 517.7866699099541 MULTI CID FTMS 0 0 0 4703 763681.8125 1.0 0 0.0 3 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 4 KTT[{I|L}P][WP]K 8 -1 47.8 0.0 0.0 4.6248 0.0 0.0 63.994944594647855 0.0 63.994944594647855 0.0 28.899451679612 0.0 0.0 0 1.6549471895720984 0.0 1.25 0.2887254899964357 KTT[{I|L}P][WP]K 4.6248 - 202 + 1 2.722 63082.6 1.0 952 3752 4703 HBL1_DMSO_200M_050219_2,4706 HBL1_DMSO_200M_050219_2,4706,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4707 23.168 200.0 220000.0 25 0 47178.0 + 5016 DGVPSKNTV 9 71 458.74032340532807 915.4660938774562 2 458.7408630251884 MULTI CID FTMS 0 0 0 4703 149515.96875 0.1871609195285394 14 -0.2017765045166015 4 Unmodified _DGVPSKNTV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000510321.1_1_4:146044588-146044753:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 29.081581746732265 0.1611639662936252 4 GSPNTV[RD] 8 6 24.11 0.0 0.0 2.6337 0.0 0.0 71.07442671943515 0.0 71.07442671943515 0.0 6.393747278289794 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.2742275032520141 GSPNTV[RD] 2.6337 - 143 1 2.722 39261.2 1.0 953 3752 4703 HBL1_DMSO_200M_050219_2,4707 HBL1_DMSO_200M_050219_2,4707,DGVPSKNTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4708 23.181 800.0 207690.0 25 0 45756.0 + 23334 LTATRGTLD 9 132 474.2624472049281 946.5103414766562 2 474.2619506716728 MULTI CID FTMS 0 0 0 4703 151797.265625 1.0 0 0.0 5 Unmodified _LTATRGTLD_ REV__ENST00000407780.7_1_21:45646995-45647220:-|nuORF 36.12702656103203 0.0967173616627612 4 [{I|L}T]AQSVSNK 9 -1 + 84.272 0.0 0.0 8.9035 8.9035 93.22 0.0 0.0 0.0 69.12205258459572 18.11416727906241 18.11416727906241 9.208187539523747 0 0.8494850021680094 2.0 0.3807196863200844 1.564909327626439 [{I|L}T]AQSVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSNK;[{I|L}T]A[WK]SNK;[{I|L}T]A[AG]SVSGGK;[{I|L}T]A[WK]SGGK;[{I|L}T]AQS{[TV]|[{I|L}S]}D{I|L};[{I|L}T]AQS{[TV]|[{I|L}S]}EV;[{I|L}T]AQS{[TV]|[{I|L}S]}{I|L}D;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VSQAVP 8.9035;7.9306;7.9306;7.2945;6.9624;6.316;5.8915;5.7962;5.7684;5.6342 -;-;-;-;-;-;-;-;-;- 721 + 1 2.722 132730.5 0.75 954 3752 4703 HBL1_DMSO_200M_050219_2,4708 HBL1_DMSO_200M_050219_2,4708,LTATRGTLD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4709 23.195 800.0 101630.0 25 0 25533.0 + 31427 RPNVTRQSSL 10 96 579.3228637576103 0 579.3228637576103 PEAK CID FTMS 0 0 0 -1 0 6 Unmodified _RPNVTRQSSL_ REV__ENST00000598424.5_1_19:17581379-17594898:+|nuORF 13.614867670302877 0.3473915201967615 4 S 1 -1 10.335 0.0 0.0 0.89356 0.0 0.0 131.09381072052844 935.4827232741192 1066.5765339946477 0.0 0.0 0.0 0.0 0 0.5731074559755159 0.0 0.0 0.0 S 0.89356 + + 14 + 1 2.722 66103.2 0.7200000286102295 955 3752 4703 HBL1_DMSO_200M_050219_2,4709 HBL1_DMSO_200M_050219_2,4709,RPNVTRQSSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4710 23.209 800.0 237030.0 25 0 35414.0 + 3301 YAYGKTGKV 9 187 329.8490079403515 0 329.8488342165947 PEAK CID FTMS 0 0 0 4703 120001.2734375 1.0 0 0.0 7 Unmodified _AYITHQRV_ ENST00000588435.1_1_18:14106276-14132276:-|nuORF 3.944395688203298 0.5857260919048012 4 V 1 7 3.9794 0.0 0.0 0.60506 0.0 0.0 69.31996815675434 486.27207361392817 555.5920417706825 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.60506 + + 19 + 1 2.722 150392.1 0.6200000047683716 956 3752 4703 HBL1_DMSO_200M_050219_2,4710 HBL1_DMSO_200M_050219_2,4710,AYITHQRV False False YAYGKTGKV 23.209114 329.848834216595 628800.5 4703.0 ENST00000588435.1_1_18:14106276-14132276:-|nuORF 4.3256824016571045 3.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4711 23.223 800.0 338940.0 25 0 64537.0 17570 KPRGSGPP 8 187 398.2272600825909 0 398.2276489138603 PEAK CID FTMS 0 0 0 4703 112861.1484375 0.3594533757033441 9 -0.1714935302734375 8 Unmodified _KPRGSGPP_ ENSG00000196218|ENST00000359596|RYR1;nc|ENSG00000196218|P21817-2|RYR1;nc|ENSG00000196218|P21817-3|RYR1 20.453626601364224 0.4093984001168845 4 PTYP 4 6 35.662 0.0 0.0 4.4889 0.0 0.0 128.09343848241969 205.0987490289672 333.1921875113869 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.7614393726401688 0.0 PTYP 4.4889 - 433 + 1 2.722 208524.8 0.6600000262260437 957 3752 4703 HBL1_DMSO_200M_050219_2,4711 HBL1_DMSO_200M_050219_2,4711,KPRGSGPP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4713 23.23 173.0 196990.0 25 0 19580.0 + 35517 STMSTNGIPR 10 60 540.2609941854893 1078.5074354377784 2 540.2614013552666 MULTI CID FTMS 0 0 0 4712 318661.59375 0.0459637093549152 12 -0.131256103515625 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 61.60191391372663 0.0323840705564037 4 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 69.902 0.0 0.0 6.4814 6.4814 58.535 0.0 0.0 0.0 7.269987279362624 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.7302046884880937 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP 6.4814;6.4814;5.6316;5.6316 -;+;-;- + 160 + 1 2.695 32385.9 1.0 958 3753 4712 HBL1_DMSO_200M_050219_2,4713 HBL1_DMSO_200M_050219_2,4713,STMSTNGIPR True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4714 23.232 123.0 528890.0 25 0 50989.0 + 27316 PHPHGREALPV 11 75 403.887806312762 1208.641589538486 3 403.8877136111259 MULTI CID FTMS 0 0 0 4712 212706.828125 0.0520555317352651 84 -1.50604248046875 2 Unmodified _PHPHGREALPV_ ENST00000400451.6_1_22:20760237-20760540:+|nuORF 6.723162845929126 0.8434276150410019 4 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 9 33.473 0.0 0.0 2.7695 0.0 0.0 0.0 394.221729589141 394.221729589141 22.18642789064525 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 2.7695 - 138 + 1 2.695 55305.2 1.0 959 3753 4712 HBL1_DMSO_200M_050219_2,4714 HBL1_DMSO_200M_050219_2,4714,PHPHGREALPV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4715 23.238 312.0 489900.0 25 0 44857.0 + 21233 LPDIKQRS 8 140 319.5225199852827 955.5457305560482 3 319.5222656130791 MULTI CID FTMS 0 0 0 4712 218017.296875 0.3723082636484767 -7 0.2639999389648437 3 Unmodified _LPDIKQRS_ REV__ENSG00000099992|ENST00000215790|TBC1D10A;REV__ENST00000462073.5_1_22:30689736-30691829:-|nuORF;REV__ENST00000466666.5_1_22:30689582-30690835:-|nuORF;REV__nc|ENSG00000099992|Q9BXI6-2|TBC1D10A 21.74664581756881 0.5868176546531598 4 [EP]{I|L}VKAG{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 + 45.379 0.0 0.0 4.749 4.749 73.326 0.0 0.0 0.0 31.448565749036064 7.727562184969372 7.727562184969372 3.4678748622465605 0 0.0 0.0 0.9247425010840048 0.4247425010840047 [EP]{I|L}VKAG{[QD]|[EN]|[WG]|[KD]|[RS]};[EP]{I|L}VKQ{[QD]|[EN]|[WG]|[KD]|[RS]};[EP]V{I|L}KAG{[QD]|[EN]|[WG]|[KD]|[RS]};[EP]V{I|L}KQ{[QD]|[EN]|[WG]|[KD]|[RS]} 4.749;4.3861;4.1456;3.7827 -;-;-;- 149 + 1 2.695 124192.8 1.0 960 3753 4712 HBL1_DMSO_200M_050219_2,4715 HBL1_DMSO_200M_050219_2,4715,LPDIKQRS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4716 23.245 378.0 252030.0 25 0 28985.0 + -1 MAPPPPRSV 9 96 484.25485756529787 966.4951621973958 2 484.2556030154228 MULTI CID FTMS 0 0 0 4712 176361.96875 0.4798272732242635 -29 0.7008419036865234 4 Oxidation (M) _M(Oxidation (M))APPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 22.736283301280096 0.2418982879461534 4 {[MS]|[{M(Oxidation (M))|F}A]}PPP 5 -1 47.24 0.0 0.0 4.8878 0.0 0.0 0.0 454.2415865533813 454.2415865533813 27.06313463732801 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}PPP 4.8878 + + 111 + 1 2.695 79214.7 1.0 961 3753 4712 HBL1_DMSO_200M_050219_2,4716 HBL1_DMSO_200M_050219_2,4716,MAPPPPRSV False False MAPPPPRSV 23.244726 484.255603015423 46711832.0 4712.0 ENSG00000105879|ENST00000440859|CBLL1;;nc|ENSG00000105879|Q75N03-2|CBLL1 7.141195774078369 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4717 23.254 503.0 161290.0 25 0 22275.0 + 17472 KPEPLLMI 8 91 470.7823711559765 939.550189378753 2 470.7823058962822 MULTI CID FTMS 0 0 0 4712 163384.40625 0.4623661134511078 4 -0.0860767364501953 5 Unmodified _KPEPLLMI_ REV__ENSG00000178163|ENST00000326756|ZNF518B 16.942295170755138 0.6606234159769251 4 KPT 3 -1 38.94 0.0 0.0 4.1446 0.0 0.0 0.0 610.3294161432249 610.3294161432249 17.971062485323515 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 KPT 4.1446 - 94 + 1 2.695 66799.7 1.0 962 3753 4712 HBL1_DMSO_200M_050219_2,4717 HBL1_DMSO_200M_050219_2,4717,KPEPLLMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4718 23.261 405.0 442740.0 25 0 47776.0 20894 LMRKAKRE 8 125 344.54193577184344 1030.6039779157304 3 344.5419494509697 MULTI CID FTMS 0 0 0 4712 170102.125 0.5617797809899491 21 -0.1842727661132812 6 Unmodified _LMRKAKRE_ ENSG00000079841|ENST00000521978|RIMS1;nc|ENSG00000079841|Q86UR5-2|RIMS1;nc|ENSG00000079841|Q86UR5-3|RIMS1;nc|ENSG00000079841|Q86UR5-4|RIMS1;nc|ENSG00000079841|Q86UR5-5|RIMS1;nc|ENSG00000079841|Q86UR5-6|RIMS1;nc|ENSG00000079841|Q86UR5-7|RIMS1;nc|ENSG00000079841|Q86UR5-8|RIMS1 14.838274106304384 0.6917062315640577 4 K{I|L}E 3 6 30.445 0.0 0.0 2.9541 0.0 0.0 642.3583323755244 0.0 642.3583323755244 0.0 -0.567435590381077 -0.567435590381077 0.0 0 0.0 0.0 0.0 0.4247425010840047 K{I|L}E 2.9541 - 74 1 2.695 147752.9 1.0 963 3753 4712 HBL1_DMSO_200M_050219_2,4718 HBL1_DMSO_200M_050219_2,4718,LMRKAKRE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4719 23.275 800.0 209410.0 25 0 17065.0 + 4196 DAPKAGQLE 9 144 464.7404900996388 0 464.7405578494072 PEAK CID FTMS 0 0 0 4712 113143.75 0.4466299919206675 -8 0.2758769989013672 7 Unmodified _DAPKAGQLE_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 38.17557092003332 0.0706864996250298 4 {M(Oxidation (M))|F}{I|L} 2 8 12.959 0.0 0.0 1.3972 0.0 0.0 186.0632254278792 478.2438692599675 664.3070946878468 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L} 1.3972 - 215 + 1 2.695 132716.5 0.5899999737739563 964 3753 4712 HBL1_DMSO_200M_050219_2,4719 HBL1_DMSO_200M_050219_2,4719,DAPKAGQLE True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4721 23.279 36.0 1024700.0 25 0 361630.0 31391 RPATPAPAP 9 44 439.24821536551366 876.4818777978273 2 439.2481872439384 MULTI CID FTMS 0 0 0 4720 1508475.5 0.533947072720808 3 -0.0341815948486328 1 Unmodified _RPATPAPAP_ ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000095539|Q9NTN9|SEMA4G 18.1463463914782 0.3454829746528889 4 AP 2 7 30.969 0.0 0.0 3.5333 0.0 0.0 690.3809236736071 0.0 690.3809236736071 0.0 26.989700043360187 0.0 0.0 0 1.0 0.0 0.0 0.0 + AP 3.5333 + + 7 + 1 2.695 35878.3 1.0 965 3754 4720 HBL1_DMSO_200M_050219_2,4721 HBL1_DMSO_200M_050219_2,4721,RPATPAPAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4722 23.281 80.0 1619200.0 25 0 217200.0 27459 PKAHSKAQ 8 103 433.74566577361406 865.4767786140281 2 433.7457458376884 MULTI CID FTMS 0 0 0 4720 724517.8125 0.1162047347974823 9 -0.06103515625 2 Unmodified _PKAHSKAQ_ ENSG00000205669|ENST00000645972|ACOT6;nc|ENSG00000205669|Q3I5F7-2|ACOT6 15.847184025352805 0.6768015514314958 4 [VG]PTGQTAA 9 8 39.039 0.0 0.0 4.5107 0.0 0.0 0.0 80.05132471256093 80.05132471256093 6.643200176607927 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.3494850021680094 0.0 [VG]PTGQTAA 4.5107 - 533 + 1 2.695 108557.5 1.0 966 3754 4720 HBL1_DMSO_200M_050219_2,4722 HBL1_DMSO_200M_050219_2,4722,PKAHSKAQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4723 23.284 165.0 434340.0 25 0 68954.0 -1 0 85 339.20159179656696 1014.582945989901 3 339.2013122439384 MULTI CID FTMS 0 0 0 4720 411091.34375 0.5464396682213254 -13 0.4587974548339844 3 4 R{I|L}DT 4 -1 18.448 0.0 0.0 1.8183 0.0 0.0 116.0960517518484 410.23008142642817 526.3261331782766 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 R{I|L}DT 1.8183 - 128 + 1 2.695 63479.3 1.0 967 3754 4720 HBL1_DMSO_200M_050219_2,4723 HBL1_DMSO_200M_050219_2,4723, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4725 23.291 245.0 267360.0 25 0 35855.0 + + 40300 GVIKRTENV 9 77 508.2981594213784 1014.5817659095568 2 508.2984802126884 MULTI CID FTMS 0 0 0 4724 294043.09375 0.609723166765108 -10 0.3373355865478515 1 Unmodified _VGVRFPLDL_ nc|ENSG00000132256|Q9C035-3|TRIM5;nc|ENSG00000132256|Q9C035-2|TRIM5;nc|ENSG00000132256|Q9C035-4|TRIM5;ENSG00000132256|ENST00000380034|TRIM5 25.399314129420983 0.2080152500878129 4 VG{I|L}KK 5 -1 65.93 0.0 0.0 6.4982 0.0 0.0 0.0 486.1912935846313 486.1912935846313 54.82061891068248 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.805462187404089 VG{I|L}KK 6.4982 - 61 + 1 2.695 55672.6 1.0 968 3755 4724 HBL1_DMSO_200M_050219_2,4725 HBL1_DMSO_200M_050219_2,4725,VGVRFPLDL False False GVIKRTENV 23.291036 508.298480212688 2589507.75 4724.0 nc|ENSG00000132256|Q9C035-3|TRIM5;;nc|ENSG00000132256|Q9C035-2|TRIM5;;nc|ENSG00000132256|Q9C035-4|TRIM5;;ENSG00000132256|ENST00000380034|TRIM5 2.482447385787964 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4726 23.305 800.0 216410.0 25 0 17124.0 + 21798 LPNHKLKTV 9 212 350.5539650141651 1048.6400656426954 3 350.5539123415947 MULTI CID FTMS 0 0 0 4724 99875.796875 0.6817079548881867 1 -0.0206851959228515 2 Unmodified _LPNHKLKTV_ ENSG00000049618|ENST00000636930|ARID1B;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B 22.774965066869 0.2414061210083823 4 {I|L}PNHKK{I|L}TV 9 2 + 49.109 0.0 0.0 4.6831 4.6831 76.837 0.0 0.0 0.0 20.50642930438049 6.434526764861879 6.434526764861879 6.434526764861879 0 0.778659694992122 0.4559319556497244 0.2215141619232908 0.4247425010840047 {I|L}PNHKK{I|L}TV;{I|L}PNHKK{I|L}S{I|L};{I|L}PGGHKK{I|L}TV;{I|L}PGGHKK{I|L}S{I|L};{I|L}PNV[PA][RV]A{I|L} 4.6831;4.0695;3.805;3.1914;0.43171 -;-;-;-;- 343 + 1 2.695 144192.5 0.5299999713897705 969 3755 4724 HBL1_DMSO_200M_050219_2,4726 HBL1_DMSO_200M_050219_2,4726,LPNHKLKTV False True LPNHKLKTV 23.304851 350.553912341595 922486.3125 4724.0 nc|ENSG00000049618|Q8NFD5-1|ARID1B;;ENSG00000049618|ENST00000636930|ARID1B;;nc|ENSG00000049618|Q8NFD5|ARID1B;;nc|ENSG00000049618|Q8NFD5-2|ARID1B 7.888142426808675 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4729 23.316 261.0 303120.0 25 0 37661.0 + 36280 SYGQSQNSY 9 111 517.2144242069915 1032.4142954807828 2 517.2151367068291 MULTI CID FTMS 0 0 0 4728 385175.25 0.990327647700183 -6 0.201181411743164 1 Unmodified _SYGQSQNSY_ nc|ENSG00000089280|P35637-2|FUS 41.8396318013385 0.0653578398400075 4 {I|L}NSY 4 6 32.172 0.0 0.0 3.1162 0.0 0.0 537.1680624258985 0.0 537.1680624258985 0.0 14.469034597845436 0.0 0.0 0 0.3807196863200844 0.0 0.9247425010840048 0.4247425010840047 {I|L}NSY 3.1162 - 325 + 1 2.682 65299.0 1.0 970 3757 4728 HBL1_DMSO_200M_050219_2,4729 HBL1_DMSO_200M_050219_2,4729,SYGQSQNSY True True SYGQSQNSY 23.315944 517.215136706829 2144458.5 4728.0 nc|ENSG00000089280|P35637-2|FUS 5.107613404591878 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 4736 23.34 4.3 10651000.0 25 0 1576000.0 + 17615 KPTAAFHLL 9 50 499.2931762711508 996.5717996091016 2 499.2934142947197 MULTI CID FTMS 0 0 0 4735 12088501.0 0.0720812168999454 18 -0.1179943084716796 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 11.640296217721598 0.521594087909532 4 KPT 3 -1 35.445 0.0 0.0 3.5567 0.0 0.0 0.0 667.3537347260627 667.3537347260627 22.68060635715151 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 KPT 3.5567 + + 16 + 1 2.682 43239.4 1.0 971 3763 4735 HBL1_DMSO_200M_050219_2,4736 HBL1_DMSO_200M_050219_2,4736,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4737 23.349 507.0 355640.0 25 0 23297.0 -1 0 206 309.19307176324924 308.18579529664925 1 309.1901428103447 MULTI CID FTMS 0 0 0 4735 131363.03125 0.7235037155662221 4 -0.0387134552001953 2 4 V 1 -1 13.979 0.0 0.0 4.536 0.0 0.0 191.10630265924533 0.0 191.10630265924533 0.0 3.701813447471221 0.0 0.0 0 0.0 0.0 0.0 0.0 V 4.536 - 19 + 1 2.682 146681.3 1.0 972 3763 4735 HBL1_DMSO_200M_050219_2,4737 HBL1_DMSO_200M_050219_2,4737, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4739 23.354 83.0 644430.0 25 0 74533.0 + 4221 DAPKDYRQV 9 89 364.5210793906279 1090.5414087720835 3 364.5207092165947 MULTI CID FTMS 0 0 0 4738 642626.9375 0.0518191949976333 20 -0.1571979522705078 1 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 41.8396318013385 0.0653578398400075 4 {[DA]|[EG]}PKDV[QT]T 9 3 62.585 0.0 0.0 5.7389 0.0 0.0 0.0 132.04596887760002 132.04596887760002 40.36683765109139 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 1.6989700043360187 {[DA]|[EG]}PKDV[QT]T 5.7389 - 72 + 1 2.682 52430.2 1.0 973 3764 4738 HBL1_DMSO_200M_050219_2,4739 HBL1_DMSO_200M_050219_2,4739,DAPKDYRQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4742 23.374 800.0 140020.0 25 0 7696.0 -1 EAFKNRMEV 9 140 380.5217923163441 1138.5435475492322 3 380.5215637087822 MULTI CID FTMS 0 0 0 4741 74369.71875 0.6546053934512807 -8 0.0419788360595703 1 Oxidation (M) _EAFKNRM(Oxidation (M))EV_ ENSG00000123562|ENST00000441076|MORF4L2 4.897010918128616 0.7437319958283661 4 Y[{M(Oxidation (M))|F}T]Q 4 -1 16.198 0.0 0.0 1.4227 0.0 0.0 0.0 596.2778414361936 596.2778414361936 4.247425010840045 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y[{M(Oxidation (M))|F}T]Q 1.4227 - 178 + 1 2.682 92408.4 0.5199999809265137 974 3766 4741 HBL1_DMSO_200M_050219_2,4742 HBL1_DMSO_200M_050219_2,4742,EAFKNRMEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4745 23.386 301.0 240050.0 25 0 44210.0 + 18248 KVIDTQQKV 9 91 529.8138611161634 1057.6131692991266 2 529.8140746951103 MULTI CID FTMS 0 0 0 4744 324011.25 0.2857534368595024 15 -0.1128406524658203 1 Unmodified _KVIDTQQKV_ ENSG00000113068|ENST00000261813|PFDN1;ENST00000507185.1_1_5:139661015-139682658:-|nuORF 48.56086444690353 0.0435252967961103 4 KV{I|L}DTQQKV 9 0 + 71.864 0.0 0.0 6.7949 6.7949 78.108 0.0 0.0 0.0 48.21842196392844 5.731136571674753 5.731136571674753 1.7165906731557357 0 2.8737125054200234 0.0 0.4247425010840047 0.3807196863200844 + + KV{I|L}DTQQKV;KVEVTQQKV;VK{I|L}DTQQKV;KV{I|L}DTQ[AG]KV;VKEVTQQKV;KVEVTQ[AG]KV;VK{I|L}DTQ[AG]KV;VKEVTQ[AG]KV 6.7949;6.6326;6.0375;5.9242;5.8752;5.7619;5.1668;5.0045 +;-;-;-;-;-;-;- + 727 + 1 2.682 60235.1 1.0 975 3768 4744 HBL1_DMSO_200M_050219_2,4745 HBL1_DMSO_200M_050219_2,4745,KVIDTQQKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4748 23.395 68.0 863940.0 25 0 91688.0 + + 8119 EPIGRGTKV 9 71 478.7798231050715 955.545093276943 2 478.7799560427666 MULTI CID FTMS 0 0 0 4747 907811.3125 0.7609301937181503 11 -0.0632495880126953 1 Unmodified _EPINRTKV_ nc|ENSG00000183199|Q58FF7|HSP90AB3P;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;ENSG00000096384|ENST00000371646|HSP90AB1 18.1463463914782 0.6428359029697936 4 EP{I|L} 3 -1 33.188 0.0 0.0 3.4732 0.0 0.0 0.0 613.3450411432249 613.3450411432249 13.935078169319295 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 EP{I|L} 3.4732 + + 53 + 1 2.682 50784.0 1.0 976 3770 4747 HBL1_DMSO_200M_050219_2,4748 HBL1_DMSO_200M_050219_2,4748,EPINRTKV False False EPIGRGTKV 23.39494 478.779956042767 6852454.5 4747.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 4.54221526781718 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4754 23.416 38.0 1446000.0 25 0 223030.0 20996 LNREGPKAL 9 81 333.1980830866818 996.5724198602454 3 333.1976806521416 MULTI CID FTMS 0 0 0 4753 1303331.375 0.0329892935069784 30 -0.5772743225097656 1 Unmodified _LNREGPKAL_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 24.020572477871973 0.2255576514309169 4 [KP]{[SA]|[TG]}QTPR{I|L} 9 8 + 30.965 0.0 0.0 3.1071 3.1071 75.73 0.0 0.0 0.0 0.4749216635742961 24.93887181533495 0.4749216635742961 9.208187539523752 0 0.3807196863200844 0.0 0.0 0.3054621874040891 [KP]{[SA]|[TG]}QTPR{I|L};[KP]{[SA]|[TG]}[AG]TPR{I|L};[KP]{[SA]|[TG]}[WP]KA{I|L};[KP]{[SA]|[TG]}[WP]AK{I|L} 3.1071;2.1831;1.8373;1.0732 -;-;-;- 105 1 2.682 50365.3 1.0 977 3775 4753 HBL1_DMSO_200M_050219_2,4754 HBL1_DMSO_200M_050219_2,4754,LNREGPKAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4755 23.421 309.0 270330.0 25 0 39077.0 + 4226 DAPKDYRQV 9 77 546.2775250394335 1090.540497145667 2 546.2776977419853 MULTI CID FTMS 0 0 0 4753 249709.0625 0.0230633588988361 32 -0.6506786346435547 2 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 32.037481411007896 0.1235546156350648 4 DAPKDY 6 3 75.75 0.0 0.0 6.9461 0.0 0.0 0.0 398.2152498834594 398.2152498834594 54.781381439366186 0.0 0.0 0.0 0 1.0356668758921828 1.6989700043360187 0.0 0.4247425010840047 + DAPKDY 6.9461 + + 130 + 1 2.682 71246.7 1.0 978 3775 4753 HBL1_DMSO_200M_050219_2,4755 HBL1_DMSO_200M_050219_2,4755,DAPKDYRQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4761 23.453 800.0 151500.0 25 0 13947.0 13530 HPAPTAGVRT 10 117 503.7752678965671 1005.5359828599342 2 503.7748290896416 MULTI CID FTMS 0 0 0 4760 85491.640625 0.507850359586158 -4 0.0158462524414062 1 Unmodified _HPAPTAGVRT_ ENST00000204005.13_1_19:41114149-41118026:+|nuORF;ENST00000546155.5_1_19:41116125-41119449:+|nuORF;ENST00000598055.1_1_19:41116760-41118026:+|nuORF;ENST00000598717.5_1_19:41105868-41118026:+|nuORF 24.99096001346401 0.4071966087057876 4 HPTQ 4 7 42.982 0.0 0.0 4.2746 0.0 0.0 0.0 539.2986544244749 539.2986544244749 21.86814535919708 0.0 0.0 0.0 0 0.7215141619232908 0.0 0.805462187404089 0.0 HPTQ 4.2746 - 329 + 1 2.682 96928.5 0.5400000214576721 979 3780 4760 HBL1_DMSO_200M_050219_2,4761 HBL1_DMSO_200M_050219_2,4761,HPAPTAGVRT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4764 23.463 168.0 421180.0 25 0 61314.0 -1 0 75 464.252114322097 463.244837855497 1 464.2520629763603 MULTI CID FTMS 0 0 0 4763 214149.859375 0.4689515134282692 -6 0.0362281799316406 1 4 E 1 -1 14.604 0.0 0.0 3.1526 0.0 0.0 316.1915979646751 0.0 316.1915979646751 0.0 7.156818820794938 0.0 0.0 0 0.0 0.0 0.0 0.0 E 3.1526 - 12 + 1 2.682 59998.3 1.0 980 3782 4763 HBL1_DMSO_200M_050219_2,4764 HBL1_DMSO_200M_050219_2,4764, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4765 23.477 800.0 201050.0 25 0 28124.0 + 26162 NPYNGGGRV 9 138 467.231209932772 932.447866932344 2 467.2307006716728 MULTI CID FTMS 0 0 0 4763 107630.3203125 0.142456724704572 -7 0.0466766357421875 2 Unmodified _NPYNGGGRV_ ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14 71.13359017698441 0.0206607516130725 4 NPYNG[RN]V 8 2 + 65.399 0.0 0.0 7.0137 7.0137 79.704 0.0 0.0 0.0 46.18124131742172 3.672137691284405 3.672137691284405 2.04119982655925 0 0.7302046884880937 1.5228787452803376 0.0 0.7742275032520141 NPYNG[RN]V;NPYNV{NN|[MP]|[D{I|L}]|[EV]}V;NPYNN{[NV]|[RG]}V;NPYNGG{[NV]|[RG]}V;NPYVN{NN|[MP]|[D{I|L}]|[EV]}V;NPV[HK]SDH;NPYGGG[RN]V;NPYGGV{NN|[MP]|[D{I|L}]|[EV]}V;NPYGGN{[NV]|[RG]}V;NPYGGGG{[NV]|[RG]}V 7.0137;6.7948;6.7399;6.6851;6.1491;6.0649;6.0204;5.8015;5.7466;5.6975 -;-;-;+;-;-;-;-;-;- + 887 + 1 2.682 124339.9 0.5400000214576721 981 3782 4763 HBL1_DMSO_200M_050219_2,4765 HBL1_DMSO_200M_050219_2,4765,NPYNGGGRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4766 23.491 800.0 103410.0 25 0 12813.0 -1 VPALDAACCR 10 106 538.2545457355919 1074.4945385379838 2 538.2552368044853 MULTI CID FTMS 0 0 0 4763 109854.5625 0.841218119490631 -3 0.0243911743164062 3 Carbamidomethyl (C) _VPALDAAC(Carbamidomethyl (C))CR_ ENSG00000178297|ENST00000696167|TMPRSS9;ENST00000395264.3_1_19:2389783-2414036:+|nuORF;nc|ENSG00000178297|Q7Z410|TMPRSS9 17.11289562659939 0.5604042439455784 4 VPAQSRR 7 -1 68.052 0.0 0.0 6.3334 0.0 0.0 0.0 277.02094446353755 277.02094446353755 44.75132007365232 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.805462187404089 VPAQSRR 6.3334 - 120 + 1 2.682 72108.8 0.5299999713897705 982 3782 4763 HBL1_DMSO_200M_050219_2,4766 HBL1_DMSO_200M_050219_2,4766,VPALDAACCR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4768 23.497 163.0 358820.0 25 0 46755.0 -1 MAPPPPRSV 9 56 484.25485756529787 966.4951621973958 2 484.2550536990166 MULTI CID FTMS 0 0 0 4767 290014.3125 0.7890407311121856 1 -0.0153045654296875 1 Oxidation (M) _M(Oxidation (M))APPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 4 {[MS]|[{M(Oxidation (M))|F}A]}PPA 5 -1 54.208 0.0 0.0 5.6087 0.0 0.0 0.0 480.24371712902354 480.24371712902354 46.76091259055681 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}PPA 5.6087 - 49 + 1 2.682 52139.2 1.0 983 3783 4767 HBL1_DMSO_200M_050219_2,4768 HBL1_DMSO_200M_050219_2,4768,MAPPPPRSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4769 23.5 149.0 553570.0 25 0 47171.0 21245 LPDLQRSK 8 97 319.5225199852827 955.5457305560482 3 319.5221435427666 MULTI CID FTMS 0 0 0 4767 174284.546875 0.2976258212438805 23 -0.5275554656982422 2 Unmodified _LPDLQRSK_ ENSG00000104164|ENST00000220531|BLOC1S6;ENST00000563160.5_1_15:45879945-45897659:+|nuORF;ENST00000568816.5_1_15:45879846-45893495:+|nuORF;nc|ENSG00000104164|Q9UL45-2|BLOC1S6 12.531546534597751 0.7257836412119636 4 [VS]{I|L}{[TV]|[{I|L}S]}{I|L} 6 6 14.181 0.0 0.0 1.4841 0.0 0.0 0.0 340.1521508043482 340.1521508043482 1.0822685886482493 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]{I|L}{[TV]|[{I|L}S]}{I|L} 1.4841 - 88 1 2.682 72457.5 1.0 984 3783 4767 HBL1_DMSO_200M_050219_2,4769 HBL1_DMSO_200M_050219_2,4769,LPDLQRSK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4770 23.506 367.0 237250.0 25 0 47269.0 + 34791 SQDPGTHVV 9 93 470.2301293578448 938.4457057824897 2 470.2302734255791 MULTI CID FTMS 0 0 0 4767 166584.84375 0.011754742969322 -16 0.1168136596679687 3 Unmodified _SQDPGTHVV_ ENSG00000130935|ENST00000253247|NOL11 52.268347100219714 0.0353964759249114 4 {[QS]|[NT]}D 3 6 41.783 0.0 0.0 4.4524 0.0 0.0 0.0 605.305181042764 605.305181042764 28.92999372323452 0.0 0.0 0.0 0 1.0 1.0969100130080565 0.2302046884880938 0.805462187404089 + {[QS]|[NT]}D 4.4524 + + 142 1 2.682 74005.9 1.0 985 3783 4767 HBL1_DMSO_200M_050219_2,4770 HBL1_DMSO_200M_050219_2,4770,SQDPGTHVV True True SQDPGTHVV 23.506241 470.230273425579 290360376.0 4767.0 ENSG00000130935|ENST00000253247|NOL11 7.718646208445231 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4773 23.527 800.0 60148.0 25 0 11656.0 -1 0 50 870.8749167882501 3479.4705612866 4 871.1273681521416 MULTI CID FTMS 0 0 0 4772 63709.8984375 0.2008894708058866 -9 0.0890693664550781 1 4 VQSAS 5 -1 38.488 0.0 0.0 1.1061 0.0 0.0 2627.0745784758565 377.14777551822505 3004.222353994081 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6549471895720984 0.0 VQSAS 1.1061 - 104 + 1 2.682 44039.2 0.3600000143051147 986 3785 4772 HBL1_DMSO_200M_050219_2,4773 HBL1_DMSO_200M_050219_2,4773, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4774 23.532 270.0 420420.0 25 0 42594.0 37137 THLPSSLVLEN 11 111 403.887806312762 1208.641589538486 3 403.8874999880791 MULTI CID FTMS 0 0 0 4772 162783.734375 0.0398379023627913 116 -2.155771255493164 2 Unmodified _THLPSSLVLEN_ nc|ENSG00000177119|Q4KMQ2-2|ANO6 7.608950283845883 0.8392484121837455 4 [{I|L}T]HPSEP 7 7 20.895 0.0 0.0 1.7288 0.0 0.0 0.0 444.2331226543336 444.2331226543336 9.92615720758863 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 [{I|L}T]HPSEP 1.7288 - 357 1 2.682 91797.0 1.0 987 3785 4772 HBL1_DMSO_200M_050219_2,4774 HBL1_DMSO_200M_050219_2,4774,THLPSSLVLEN False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 4776 23.547 724.0 111370.0 25 0 24007.0 26835 PARTPAPAP 9 115 439.24821536551366 876.4818777978273 2 439.2477599978447 MULTI CID FTMS 0 0 0 4775 118816.9296875 0.0420569984705185 35 -0.8939228057861328 1 Unmodified _PARTPAPAP_ ENSG00000169733|ENST00000310496|RFNG;ENST00000582478.5_1_17:80008786-80009642:-|nuORF 24.020572477871973 0.2255576514309169 4 [PA]R[TP]APAP 9 0 [PA]R[TP]A + + 30.445 -5.6415 -0.95082 3.4736 3.4736 47.094 0.0 0.0 0.0 0.0 17.25772496747986 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + + [PA]R[TP]APAP 3.4736 + + 67 + 1 2.682 70123.4 1.0 988 3786 4775 HBL1_DMSO_200M_050219_2,4776 HBL1_DMSO_200M_050219_2,4776,PARTPAPAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4777 23.561 800.0 205200.0 25 0 21298.0 -1 PAVQMRPMN 9 178 359.171696593466 1074.493260380598 3 359.1713134646416 MULTI CID FTMS 0 0 0 4775 108244.6484375 0.8243672418721202 1 -0.0566043853759765 2 2 Oxidation (M) _PAVQM(Oxidation (M))RPM(Oxidation (M))N_ ENSG00000184384|ENST00000524717|MAML2 8.155526934196011 0.6299788542272896 4 VPAQ 4 -1 38.578 0.0 0.0 3.5903 0.0 0.0 0.0 676.2551906952834 676.2551906952834 16.905697609243713 0.0 0.0 0.0 0 0.2215141619232908 0.619788758288394 0.0 0.4247425010840047 VPAQ 3.5903 - 184 + 1 2.682 145287.8 0.8999999761581421 989 3786 4775 HBL1_DMSO_200M_050219_2,4777 HBL1_DMSO_200M_050219_2,4777,PAVQMRPMN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4778 23.574 800.0 65920.0 25 0 4382.7 -1 0 67 714.9732724781218 2141.897988034565 3 714.9746581912041 MULTI CID FTMS 0 0 0 4775 98659.390625 0.9820406899355 -3 0.0407218933105468 3 4 [PS]{[YD]|[{M(Oxidation (M))|F}M]}Q[DV]GTSP 11 -1 64.393 0.0 0.0 3.0064 0.0 0.0 0.0 992.37239129609 992.37239129609 39.2284714157237 0.0 0.0 0.0 0 0.5 1.5228787452803376 1.0994850021680094 2.0986198691406326 [PS]{[YD]|[{M(Oxidation (M))|F}M]}Q[DV]GTSP 3.0064 - 528 1 2.682 45572.9 0.4199999868869781 990 3786 4775 HBL1_DMSO_200M_050219_2,4778 HBL1_DMSO_200M_050219_2,4778, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4779 23.588 800.0 80587.0 25 0 11760.0 -1 0 39 1160.8308583067385 3479.470745520415 3 1161.165454089642 MULTI CID FTMS 0 0 0 4775 81286.5 0.2479632767322133 -8 0.1026344299316406 4 4 G 1 -1 6.9897 0.0 0.0 0.20088 0.0 0.0 1255.437920244835 2163.984241576341 3419.422161821176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20088 - 30 + 1 2.682 57401.7 0.3000000119209289 991 3786 4775 HBL1_DMSO_200M_050219_2,4779 HBL1_DMSO_200M_050219_2,4779, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4781 23.602 580.0 126650.0 25 0 17097.0 + 40129 VGLLFQNPK 9 97 508.2981594213784 1014.5817659095568 2 508.2978088259697 MULTI CID FTMS 0 0 0 4780 69268.828125 0.1436347601429866 22 -0.4935684204101562 1 Unmodified _VGLLFQNPK_ REV__ENSG00000162402|ENST00000294383|USP24 11.640296217721598 0.521594087909532 4 VG{I|L}K 4 -1 53.034 0.0 0.0 5.2272 0.0 0.0 0.0 614.2923067682249 614.2923067682249 32.77310937020445 0.0 0.0 0.0 0 0.2059771852360797 1.5228787452803376 0.0 0.3807196863200844 VG{I|L}K 5.2272 - 218 + 1 2.688 61433.9 1.0 992 3787 4780 HBL1_DMSO_200M_050219_2,4781 HBL1_DMSO_200M_050219_2,4781,VGLLFQNPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4782 23.612 532.0 176030.0 25 0 23615.0 36274 SYGGQQQSY 9 109 509.2171648898129 1016.419776846426 2 509.2173644900322 MULTI CID FTMS 0 0 0 4780 161689.578125 0.0703561320713666 -12 0.1775131225585937 2 Unmodified _SYGGQQQSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 56.17704186161178 0.0281986971544335 4 [AG]SYNQQSY 9 5 + 52.062 0.0 0.0 5.1221 5.1221 74.767 0.0 0.0 0.0 6.581755640375803 8.824995917031934 6.581755640375803 3.394192071636958 0 0.7429928190999391 1.6989700043360187 1.341129063296272 0.3252574989159953 [AG]SYNQQSY;[AG]SYQNQSY;{[{M(Oxidation (M))|F}C]|[YS]}QNQQSY;{[{M(Oxidation (M))|F}C]|[YS]}GANQQSY;{[QS]|[NT]}YNQQSY;GGTYNQQSY;[AG]SYNQ[AG]SY;[AG]SYN[AG]QSY;[AG]SYGGQQSY;{[{M(Oxidation (M))|F}C]|[YS]}QQNQSY 5.1221;4.7881;4.4745;4.4067;4.3866;4.2317;4.2161;4.2161;4.2161;4.1406 -;-;-;-;-;-;-;-;-;- 1421 1 2.688 75824.4 1.0 993 3787 4780 HBL1_DMSO_200M_050219_2,4782 HBL1_DMSO_200M_050219_2,4782,SYGGQQQSY True True YSQNQQSY 23.611635 509.217364490032 30329344.0 4780.0 ENSG00000270647|ENST00000605844|TAF15;;nc|ENSG00000270647|Q92804-2|TAF15 1.4659083286921184 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4783 23.625 800.0 81445.0 25 0 11524.0 + -1 EIFSEMASMS 10 110 574.2357185641031 1146.456884195006 2 574.2362548708916 MULTI CID FTMS 0 0 0 4780 83724.234375 0.7522522920923078 -1 0.0566043853759765 3 Oxidation (M) _EIFSEM(Oxidation (M))ASMS_ REV__ENSG00000120451|ENST00000265909|SNX19 25.399314129420983 0.3980215340001851 4 [HQ]EAEGTGT{[MS]|[{M(Oxidation (M))|F}A]} 11 -1 + 61.622 0.0 0.0 5.375 5.375 80.575 0.0 0.0 0.0 7.297662931301495 5.862435673934279 5.862435673934279 7.297662931301495 0 0.5866968715561641 0.0 1.924742501084005 0.6109243748081782 [HQ]EAEGTGT{[MS]|[{M(Oxidation (M))|F}A]};{[CP]|[EA]}HQEGTGT{[MS]|[{M(Oxidation (M))|F}A]};{[CP]|[EA]}HQWTGT{[MS]|[{M(Oxidation (M))|F}A]};[HQ]EAS{[CP]|[EA]}GT{[MS]|[{M(Oxidation (M))|F}A]};[HQ]EAE{[QS]|[NT]}T{[MS]|[{M(Oxidation (M))|F}A]};{[CP]|[EA]}H[AG]EGTGT{[MS]|[{M(Oxidation (M))|F}A]};[HQ]EAS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T[DC];{[CP]|[EA]}H[AG]WTGT{[MS]|[{M(Oxidation (M))|F}A]};{[CP]|[EA]}HQS{[CP]|[EA]}GT{[MS]|[{M(Oxidation (M))|F}A]};[HQ]EAEG{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[MS]|[{M(Oxidation (M))|F}A]} 5.375;4.7384;4.462;3.7716;3.7406;3.6101;3.5102;3.3305;3.1351;3.0864 -;-;-;-;-;-;-;-;-;- 552 1 2.688 56884.6 0.4300000071525574 994 3787 4780 HBL1_DMSO_200M_050219_2,4783 HBL1_DMSO_200M_050219_2,4783,EIFSEMASMS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4785 23.63 35.0 1446100.0 25 0 217850.0 + 17616 KPTAAFHLL 9 57 499.2931762711508 996.5717996091016 2 499.2932311892509 MULTI CID FTMS 0 0 0 4784 1625014.0 0.0096896204582725 43 -0.968158721923828 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 4 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3549288385374 667.3549288385374 36.92852776127513 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 13 + 1 2.688 45316.6 1.0 995 3788 4784 HBL1_DMSO_200M_050219_2,4785 HBL1_DMSO_200M_050219_2,4785,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4786 23.637 365.0 205770.0 25 0 15612.0 + 4222 DAPKDYRQV 9 117 364.5210793906279 1090.5414087720835 3 364.5206481814384 MULTI CID FTMS 0 0 0 4784 161572.6875 0.0130286580149064 44 -0.9719982147216796 2 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 27.628801355627647 0.1796483985696185 4 {[DA]|[EG]}PKDY 6 3 46.704 0.0 0.0 4.2827 0.0 0.0 0.0 398.21494470767817 398.21494470767817 22.32335761057305 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {[DA]|[EG]}PKDY 4.2827 + + 47 + 1 2.688 64859.2 1.0 996 3788 4784 HBL1_DMSO_200M_050219_2,4786 HBL1_DMSO_200M_050219_2,4786,DAPKDYRQV False True DAPKDYRQV 23.636834 364.520648181438 903705848.0 4784.0 ENSG00000162063|ENST00000397066|CCNF 6.287674109141032 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4790 23.661 800.0 145900.0 25 0 8456.1 + 8120 EPINRTKV 8 132 478.7798231050715 955.545093276943 2 478.7794982790947 MULTI CID FTMS 0 0 0 4789 100687.25 0.0843963581335607 32 -0.8314628601074219 1 Unmodified _EPINRTKV_ REV__ENST00000538616.1_1_12:6559812-6560605:-|nuORF 43.85829265575387 0.1697421968005898 4 EP{I|L} 3 -1 30.851 0.0 0.0 3.2286 0.0 0.0 0.0 613.3393648736936 613.3393648736936 13.134162082705725 0.0 0.0 0.0 0 0.2134679910804404 1.154901959985743 0.0 0.0 EP{I|L} 3.2286 + + 381 + 1 2.688 92982.5 0.5099999904632568 997 3791 4789 HBL1_DMSO_200M_050219_2,4790 HBL1_DMSO_200M_050219_2,4790,EPINRTKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4791 23.672 627.0 265770.0 25 0 31372.0 1078 AGKGPGKG 8 180 336.19544036377783 670.3763277943557 2 336.1950866580009 MULTI CID FTMS 0 0 0 4789 168157.59375 0.4082461110335577 -7 0.1386318206787109 2 Unmodified _AGKGPGKG_ ENST00000372852.3_1_1:40105296-40105449:-|nuORF 0.6903765706972694 0.8201419426409876 4 QR[PS]A{I|L} 6 7 + 53.849 0.0 0.0 8.0327 8.0327 94.213 0.0 0.0 0.0 11.850461017086076 12.898036089799234 11.850461017086076 12.898036089799234 0 1.3494850021680094 1.0969100130080565 0.0 0.0 QR[PS]A{I|L};[AG]R[PS]A{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[PS]A{I|L};[AG]R{[SA]|[TG]}P{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[SA]|[TG]}P{I|L};[AG][WK]P{I|L};[AG]PKW{I|L};[QP]KW{I|L} 8.0327;6.1087;5.2434;4.4482;3.5829;2.3289;1.7374;0.89031 -;-;-;-;-;-;-;- 117 + 1 2.688 131577.8 1.0 998 3791 4789 HBL1_DMSO_200M_050219_2,4791 HBL1_DMSO_200M_050219_2,4791,AGKGPGKG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4794 23.683 224.0 427190.0 25 0 50622.0 20997 LNREGPKAL 9 105 333.1980830866818 996.5724198602454 3 333.1977416872978 MULTI CID FTMS 0 0 0 4793 287159.84375 0.0072684511019976 48 -1.0857295989990234 1 Unmodified _LNREGPKAL_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 18.1463463914782 0.3454829746528889 4 [KP]{[SA]|[TG]}QTPR{I|L} 9 8 + 36.026 0.0 0.0 3.615 3.615 69.976 0.0 0.0 0.0 3.890960351139981 13.467874862246564 3.890960351139981 3.890960351139981 0 0.3807196863200844 0.0 0.0 0.2887254899964357 [KP]{[SA]|[TG]}QTPR{I|L};[TP][KG]QTPR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GTPK{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]KA{I|L};[KP]{[SA]|[TG]}[AG]TPR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G[RV]A{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}NR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{[VA]|[{I|L}G]}R{I|L};[KP][WQ]TPK{I|L};[HV][{M(Oxidation (M))|F}V]GTPK{I|L} 3.615;3.2246;3.1362;2.8409;2.691;2.6398;2.5427;2.5143;2.4862;2.3677 -;-;-;-;-;-;-;-;-;- 352 1 2.688 79436.3 1.0 999 3793 4793 HBL1_DMSO_200M_050219_2,4794 HBL1_DMSO_200M_050219_2,4794,LNREGPKAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4795 23.697 800.0 128600.0 25 0 19996.0 + 28236 PQQPAAYAL 9 110 479.7515310823304 957.4885092314609 2 479.7515441775322 MULTI CID FTMS 0 0 0 4793 95189.2421875 0.1875468204284375 -10 0.1852455139160156 2 Unmodified _PQQPAAYAL_ ENSG00000157303|ENST00000375472|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;nc|ENSG00000157303|Q96L08-3|SUSD3 36.04419817259434 0.0971720506436186 4 PQD 3 7 58.026 0.0 0.0 6.0603 0.0 0.0 0.0 614.3256694590558 614.3256694590558 40.169773894255 0.0 0.0 0.0 0 1.134400500525261 1.6989700043360187 0.0 0.3494850021680094 PQD 6.0603 - 66 + 1 2.688 83639.7 0.6200000047683716 1000 3793 4793 HBL1_DMSO_200M_050219_2,4795 HBL1_DMSO_200M_050219_2,4795,PQQPAAYAL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4796 23.711 800.0 196430.0 25 0 25667.0 45380 YSYYCDQN 8 109 528.1909610858715 1054.367369238543 2 528.1917602419853 MULTI CID FTMS 0 0 0 4793 98546.5546875 0.2328440589499426 -8 0.1659145355224609 3 Unmodified _YSYYCDQN_ ENSG00000134365|ENST00000608469|CFHR4;ENSG00000134365|ENST00000608469|CFHR4;nc|ENSG00000134365|Q92496-2|CFHR4;nc|ENSG00000134365|Q92496-2|CFHR4;nc|ENSG00000134365|Q92496-3|CFHR4 12.531546534597751 0.7257836412119636 4 YS 2 6 37.959 0.0 0.0 3.6001 0.0 0.0 0.0 801.2468883845117 801.2468883845117 26.03408749299639 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + YS 3.6001 + + 67 + 1 2.688 126369.2 0.5 1001 3793 4793 HBL1_DMSO_200M_050219_2,4796 HBL1_DMSO_200M_050219_2,4796,YSYYCDQN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4799 23.719 85.0 660860.0 25 0 60225.0 + 26163 NPYNGGGRV 9 76 467.231209932772 932.447866932344 2 467.2316467165947 MULTI CID FTMS 0 0 0 4798 656481.375 0.868901869292241 6 -0.1610260009765625 1 Unmodified _NPYNGGGRV_ ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14 71.13359017698441 0.0206607516130725 4 NPYNN{[NV]|[RG]}V 8 2 + 58.72 0.0 0.0 6.2974 6.2974 73.587 0.0 0.0 0.0 46.73049371303343 0.0480560651092147 0.0480560651092147 0.3553184605451847 0 0.7742275032520141 1.5228787452803376 0.0 0.6643943297944485 NPYNN{[NV]|[RG]}V;NPYNG[RN]V;NPYNGG{[NV]|[RG]}V;NPYNV{NN|[MP]|[D{I|L}]|[EV]}V;NPYVN{NN|[MP]|[D{I|L}]|[EV]}V;NPYGGN{[NV]|[RG]}V;NPYGGG[RN]V;NPYGGGG{[NV]|[RG]}V;NPYGGV{NN|[MP]|[D{I|L}]|[EV]}V;NPYVGG{NN|[MP]|[D{I|L}]|[EV]}V 6.2974;6.2593;6.2426;5.9365;5.6136;5.3041;5.266;5.255;4.9432;4.6203 -;-;+;-;-;-;-;-;-;- + 192 + 1 2.688 51396.6 1.0 1002 3795 4798 HBL1_DMSO_200M_050219_2,4799 HBL1_DMSO_200M_050219_2,4799,NPYNGGGRV True True NPYNGGGRV 23.719359 467.231646716595 8838367.0 4798.0 nc|ENSG00000173193|Q460N5-1|PARP14;;ENSG00000173193|ENST00000474629|PARP14;;nc|ENSG00000173193|Q460N5-4|PARP14 7.9190951983133955 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4800 23.729 542.0 150340.0 25 0 12057.0 + 5753 DPPASASQV 9 120 436.2112301705547 0 436.2112914919853 PEAK CID FTMS 0 0 0 4798 186313.546875 1.0 0 0.0 2 Unmodified _DPPASASQV_ ENSG00000130816|ENST00000359526|DNMT1 54.773552608820026 0.0223190572393154 4 SADPAD 6 8 16.991 0.0 0.0 1.9521 0.0 0.0 245.14058670654063 66.03568445377186 311.1762711603125 0.0 0.0 0.0 0.0 0 0.1861818737241735 0.0 0.9802046884880938 0.0 SADPAD 1.9521 - 75 + 1 2.688 69736.9 1.0 1003 3795 4798 HBL1_DMSO_200M_050219_2,4800 HBL1_DMSO_200M_050219_2,4800,DPPASASQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4802 23.738 324.0 270130.0 25 0 69054.0 + 4080 DAMSSQQNV 9 97 490.2109970768801 978.4074412205604 2 490.2111694216728 MULTI CID FTMS 0 0 0 4801 201986.96875 0.8690872388477477 -1 0.0143032073974609 1 Unmodified _DAMSSQQNV_ ENSG00000003393|ENST00000264276|ALS2;ENST00000482789.5_1_2:202606311-202633608:-|nuORF;ENST00000482891.5_1_2:202587756-202633608:-|nuORF;nc|ENSG00000003393|Q96Q42-2|ALS2;nc|ENSG00000003393|Q96Q42-3|ALS2 21.74664581756881 0.2544899275067181 4 {[DA]|[EG]}M{I|L}DM 6 6 31.859 0.0 0.0 3.2562 0.0 0.0 0.0 299.1331241641728 299.1331241641728 15.071434489719884 0.0 0.0 0.0 0 0.0 2.0 0.2887254899964357 0.0 {[DA]|[EG]}M{I|L}DM 3.2562 - 446 1 2.688 71562.4 1.0 1004 3796 4801 HBL1_DMSO_200M_050219_2,4802 HBL1_DMSO_200M_050219_2,4802,DAMSSQQNV False True DAMSSQQNV 23.73814 490.211169421673 1499188.25 4801.0 ENST00000482789.5_1_2:202606311-202633608:-|nuORF;;ENST00000482891.5_1_2:202587756-202633608:-|nuORF;;ENSG00000003393|ENST00000264276|ALS2;;nc|ENSG00000003393|Q96Q42-3|ALS2;;nc|ENSG00000003393|Q96Q42-2|ALS2 6.924943923950195 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4803 23.752 800.0 214600.0 25 0 13633.0 36252 SYENEEPAC 9 139 521.1950733188191 1040.3755937044382 2 521.1949340701103 MULTI CID FTMS 0 0 0 4801 107734.28125 0.6354785738465916 -3 0.0526943206787109 2 Unmodified _SYENEEPAC_ ENSG00000213658|ENST00000395456|LAT;nc|ENSG00000213658|O43561-3|LAT;nc|ENSG00000213658|O43561-4|LAT 20.453626601364224 0.2830276176381075 4 SY 2 7 18.36 0.0 0.0 1.7647 0.0 0.0 772.269104514108 0.0 772.269104514108 0.0 0.0225912058540878 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.0 + SY 1.7647 + + 104 + 1 2.688 130551.7 0.4900000095367431 1005 3796 4801 HBL1_DMSO_200M_050219_2,4803 HBL1_DMSO_200M_050219_2,4803,SYENEEPAC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4804 23.764 687.0 110730.0 25 0 5630.7 + 23124 LSPHGQEEK 9 104 512.756008608992 1023.497464284784 2 512.7566406130791 MULTI CID FTMS 0 0 0 4801 88322.8359375 0.2046743534883081 -13 0.2379398345947265 3 Unmodified _LSPHGQEEK_ REV__ENST00000532458.1_1_14:95582860-95590585:-|nuORF 32.78568957990786 0.1150597335874693 4 HVDAAEK 7 -1 80.863 0.0 0.0 7.9007 0.0 0.0 255.1200101712232 0.0 255.1200101712232 0.0 58.85139375005929 0.0 0.0 0 2.9489700043360187 0.0 1.1203715150305282 0.3494850021680094 HVDAAEK 7.9007 - 442 + 1 2.688 61331.9 1.0 1006 3796 4801 HBL1_DMSO_200M_050219_2,4804 HBL1_DMSO_200M_050219_2,4804,LSPHGQEEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4806 23.769 5.2 9793200.0 25 0 907000.0 + 34792 SQDPGTHVV 9 84 470.2301293578448 938.4457057824897 2 470.2304565310478 MULTI CID FTMS 0 0 0 4805 11540879.0 0.8143601976698229 -2 0.0493450164794921 1 Unmodified _SQDPGTHVV_ ENSG00000130935|ENST00000253247|NOL11 43.85829265575387 0.0542763391141878 4 {[QS]|[NT]}D 3 6 39.71 0.0 0.0 4.2315 0.0 0.0 0.0 605.3049031303989 605.3049031303989 25.76483730104272 0.0 0.0 0.0 0 1.0 0.9208187539523752 0.2742275032520141 0.8807196863200843 + {[QS]|[NT]}D 4.2315 + + 170 1 2.688 46705.6 1.0 1007 3797 4805 HBL1_DMSO_200M_050219_2,4806 HBL1_DMSO_200M_050219_2,4806,SQDPGTHVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4807 23.773 206.0 321950.0 25 0 39026.0 -1 MAPPPPRSV 9 77 484.25485756529787 966.4951621973958 2 484.2552978396416 MULTI CID FTMS 0 0 0 4805 265687.5625 0.7228550437917249 15 -0.3501472473144531 2 Oxidation (M) _M(Oxidation (M))APPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 4 {[MS]|[{M(Oxidation (M))|F}A]}PPP 5 -1 47.263 0.0 0.0 4.8901 0.0 0.0 0.0 454.2461059060033 454.2461059060033 41.77825934852436 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}PPP 4.8901 + + 44 + 1 2.688 56572.7 1.0 1008 3797 4805 HBL1_DMSO_200M_050219_2,4807 HBL1_DMSO_200M_050219_2,4807,MAPPPPRSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4808 23.786 800.0 191940.0 25 0 15112.0 17723 KPVGFTVHAI 10 132 534.81168229843 1067.60881166366 2 534.8119384646416 MULTI CID FTMS 0 0 0 4805 146921.84375 0.2447288420510399 -7 0.1230583190917968 3 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 30.63653989081413 0.2803493085145199 4 KPTQR 5 7 50.771 0.0 0.0 4.7556 0.0 0.0 0.0 454.23191248111567 454.23191248111567 32.310450018512924 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7059771852360797 0.0 KPTQR 4.7556 - 74 + 1 2.688 119105.2 0.5799999833106995 1009 3797 4805 HBL1_DMSO_200M_050219_2,4808 HBL1_DMSO_200M_050219_2,4808,KPVGFTVHAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4809 23.8 800.0 98744.0 25 0 11396.0 -1 EPGKECVQPA 10 98 557.7650232312103 1113.5154935292203 2 557.7656127810478 MULTI CID FTMS 0 0 0 4805 83671.140625 0.946436106562748 -15 0.3064918518066406 4 Carbamidomethyl (C) _EPGKEC(Carbamidomethyl (C))VQPA_ ENSG00000174437|ENST00000539276|ATP2A2;ENST00000313432.5_1_12:110783758-110784272:+|nuORF;nc|ENSG00000174437|P16615-4|ATP2A2 10.073929032068715 0.6785112666868882 4 [EP][KG][YK]GKP 9 -1 25.128 0.0 0.0 2.2567 0.0 0.0 0.0 125.95902874986427 125.95902874986427 15.213588493315932 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.8807196863200843 0.0 [EP][KG][YK]GKP 2.2567 - 158 1 2.688 62648.9 0.4399999976158142 1010 3797 4805 HBL1_DMSO_200M_050219_2,4809 HBL1_DMSO_200M_050219_2,4809,EPGKECVQPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4810 23.814 800.0 147840.0 25 0 19028.0 + 26680 NYLPQSREK 9 110 378.8683036844336 1133.5830816535008 3 378.8682433962822 MULTI CID FTMS 0 0 0 4805 82596.28125 0.6819146327352079 -4 0.0877361297607421 5 Unmodified _NYLPQSREK_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 19.62595529434964 0.305431704817896 4 [YN]{I|L}PQK 6 3 54.966 0.0 0.0 4.8489 0.0 0.0 0.0 387.16550623111567 387.16550623111567 40.82412026263634 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.7302046884880937 [YN]{I|L}PQK 4.8489 - 265 + 1 2.688 100755.3 0.3799999952316284 1011 3797 4805 HBL1_DMSO_200M_050219_2,4810 HBL1_DMSO_200M_050219_2,4810,NYLPQSREK False True NYLPQSREK 23.814089 378.868243396282 768018.3125 4805.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 0.6258785724639893 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4812 23.832 800.0 130340.0 25 0 16896.0 + -1 DPPASASQV 9 62 870.8749167882501 3479.4705612866 4 871.6276122927666 MULTI CID FTMS 0 0 0 4811 114206.546875 0.5826356966823601 4 -0.0917263031005859 1 ENSG00000130816|ENST00000359526|DNMT1 4 VQSASAA[YG] 9 -1 41.978 0.0 0.0 1.2064 0.0 0.0 2627.068963241481 0.0 2627.068963241481 0.0 23.56160314313349 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 VQSASAA[YG] 1.2064 - 297 + 1 2.677 84064.9 0.6100000143051147 1012 3798 4811 HBL1_DMSO_200M_050219_2,4812 HBL1_DMSO_200M_050219_2,4812, False False DPPASASQV 23.831664 871.627612292767 8486711.0 4811.0 ENSG00000130816|ENST00000359526|DNMT1 7.843924999237059 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4813 23.834 87.0 736600.0 25 0 105820.0 + 36547 TAKPGVSTV 9 95 430.24786301555406 858.4811730979081 2 430.2478820681572 MULTI CID FTMS 0 0 0 4811 517090.84375 0.4618410320110357 -7 0.1690692901611328 2 Unmodified _TAKPGVSTV_ ENSG00000141867|ENST00000679869|BRD4;nc|ENSG00000141867|O60885-2|BRD4;nc|ENSG00000141867|O60885-3|BRD4 34.40172386719151 0.1061884637610825 4 [TA]K 3 6 29.794 0.0 0.0 3.4705 0.0 0.0 0.0 555.2781466119749 555.2781466119749 15.457574905606748 0.0 0.0 0.0 0 0.535666875892183 1.3979400086720375 0.0 0.0 + [TA]K 3.4705 + + 159 + 1 2.677 52656.2 1.0 1013 3798 4811 HBL1_DMSO_200M_050219_2,4813 HBL1_DMSO_200M_050219_2,4813,TAKPGVSTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4814 23.841 391.0 363020.0 25 0 57501.0 + 18461 KYHVSEKPY 9 125 384.2013410571898 1149.5821937717694 3 384.2012512087822 MULTI CID FTMS 0 0 0 4811 145364.015625 0.1545022850263085 -7 0.1690692901611328 3 Unmodified _KYHVSEKPY_ ENSG00000165264|ENST00000379847|NDUFB6 27.22323531849824 0.1848086127304535 4 KYHVSEKYP 9 2 + 57.75 0.0 0.0 5.0236 5.0236 52.59 0.0 0.0 0.0 16.478174818886373 0.0 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.0 KYHVSEKYP;KYHVSEKPY;KYHVSEK{M(Oxidation (M))|F}{I|L};KYHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SPY;KYHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SYP;KYHVS{[VA]|[{I|L}G]}SYP;KYHVS{[VA]|[{I|L}G]}SPY;KYHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{M(Oxidation (M))|F}{I|L};KYHVS{[VA]|[{I|L}G]}S{M(Oxidation (M))|F}{I|L};KYHVSE[Q{I|L}]{M(Oxidation (M))|F} 5.0236;5.0236;4.3912;4.3323;4.3323;4.115;4.115;3.6999;3.4826;3.437 -;+;-;-;-;-;-;-;-;- + 405 + 1 2.677 119912.8 1.0 1014 3798 4811 HBL1_DMSO_200M_050219_2,4814 HBL1_DMSO_200M_050219_2,4814,KYHVSEKPY False True KYHVSEKPY 23.840593 384.201251208782 6839688.9375 4811.0 ENSG00000165264|ENST00000379847|NDUFB6 6.180634180704753 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4815 23.853 694.0 118840.0 25 0 10159.0 + 5972 DQSMYFDS 8 112 496.68647512958114 991.3583973259624 2 496.6865417361259 MULTI CID FTMS 0 0 0 4811 103066.40625 0.7338282444191785 -5 0.1377601623535156 4 Unmodified _DQSMYFDS_ REV__ENSG00000102893|ENST00000323584|PHKB;REV__nc|ENSG00000102893|Q93100-2|PHKB;REV__nc|ENSG00000102893|Q93100-3|PHKB;REV__nc|ENSG00000102893|Q93100-4|PHKB 16.942295170755138 0.6606234159769251 4 {[QD]|[EN]|[WG]|[KD]|[RS]}S[C(Carbamidomethyl (C))Q]DN 7 -1 17.641 0.0 0.0 1.7795 0.0 0.0 0.0 141.0415042555991 141.0415042555991 8.1772587322728 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.2887254899964357 0.3054621874040891 {[QD]|[EN]|[WG]|[KD]|[RS]}S[C(Carbamidomethyl (C))Q]DN 1.7795 - 53 1 2.677 66376.7 1.0 1015 3798 4811 HBL1_DMSO_200M_050219_2,4815 HBL1_DMSO_200M_050219_2,4815,DQSMYFDS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4817 23.857 27.0 1376200.0 25 0 213190.0 + 45354 YSQNQQSY 8 61 509.2171648898129 1016.419776846426 2 509.2174255251884 MULTI CID FTMS 0 0 0 4816 2298159.0 1.0 0 0.0 1 Unmodified _YSQNQQSY_ ENSG00000270647|ENST00000605844|TAF15;nc|ENSG00000270647|Q92804-2|TAF15 32.30548876998284 0.3644845974844379 4 QNQ[MT] 5 5 25.502 0.0 0.0 2.509 0.0 0.0 396.1636255786509 0.0 396.1636255786509 0.0 8.819459175083605 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 QNQ[MT] 2.509 - 263 + 1 2.677 36914.7 1.0 1016 3799 4816 HBL1_DMSO_200M_050219_2,4817 HBL1_DMSO_200M_050219_2,4817,YSQNQQSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4818 23.87 718.0 84299.0 25 0 11429.0 -1 0 41 1160.8308583067385 3479.470745520415 3 1161.166064441204 MULTI CID FTMS 0 0 0 4816 169347.078125 0.5165907794886129 5 -0.1129875183105468 2 4 G 1 -1 6.9897 0.0 0.0 0.20088 0.0 0.0 1255.4241772612038 2163.9911017520744 3419.4152790132785 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20088 - 7 + 1 2.677 51969.3 1.0 1017 3799 4816 HBL1_DMSO_200M_050219_2,4818 HBL1_DMSO_200M_050219_2,4818, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4819 23.872 89.0 770000.0 25 0 98459.0 + + 3177 AVVPKTKEV 9 74 324.2027269622696 969.5863514870088 3 324.2024108767509 MULTI CID FTMS 0 0 0 4816 668503.6875 0.9637066787135344 -4 0.1379222869873047 3 Unmodified _AVVGKEVVGL_ ENSG00000135862|ENST00000258341|LAMC1 24.99096001346401 0.4071966087057876 4 {[VA]|[{I|L}G]}VPKT 6 -1 53.333 0.0 0.0 5.5006 0.0 0.0 0.0 371.1932772272094 371.1932772272094 24.063411771301304 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}VPKT 5.5006 - 174 + 1 2.677 61468.5 1.0 1018 3799 4816 HBL1_DMSO_200M_050219_2,4819 HBL1_DMSO_200M_050219_2,4819,AVVGKEVVGL False False AVVPKTKEV 23.871735 324.202410876751 6870623.75 4816.0 ENSG00000135862|ENST00000258341|LAMC1 4.560371398925781 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4822 23.892 800.0 163920.0 25 0 15321.0 + 42512 VTLDSPVLY 9 127 503.7745561281733 1005.5345593231468 2 503.7745544314384 MULTI CID FTMS 0 0 0 4821 126337.5 0.0099976916381511 -12 0.2387657165527343 1 Unmodified _VTLDSPVLY_ REV__ENSG00000139112|ENST00000266458|GABARAPL1;REV__ENSG00000170296|ENST00000302386|GABARAP;REV__nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 42.09456458481378 0.0639583784996157 4 VT{I|L}DTTQKT 9 -1 + 87.294 0.0 0.0 8.6813 8.6813 83.102 0.0 0.0 0.0 35.92100722926873 2.619025876622913 2.619025876622913 2.021473440651576 0 0.5451140161145328 2.0 1.677825934852436 0.3494850021680094 VT{I|L}DTTQKT;VT{I|L}DTTKQT;VT{I|L}DTTQTK;VT{I|L}DTT[AG]KT;VT{I|L}DTT[AG]TK;VT{I|L}DTTK[AG]T;VT{I|L}[WM]QKT;VT{I|L}[WM]KQT;VT{I|L}[WM]QTK;VT{I|L}DTVY[VP] 8.6813;8.4803;8.4209;7.7656;7.5051;7.3159;6.8669;6.6659;6.6065;6.4243 -;-;-;-;-;-;-;-;-;- 711 + 1 2.677 100477.5 0.6399999856948853 1019 3801 4821 HBL1_DMSO_200M_050219_2,4822 HBL1_DMSO_200M_050219_2,4822,VTLDSPVLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4823 23.906 800.0 101410.0 25 0 6921.9 -1 TPVDMQTYE 9 109 550.2363232090936 1098.458093484987 2 550.2368652224541 MULTI CID FTMS 0 0 0 4821 100364.3671875 1.0 0 0.0 2 Oxidation (M) _TPVDM(Oxidation (M))QTYE_ ENSG00000025039|ENST00000369415|RRAGD;nc|ENSG00000025039|Q9NQL2-2|RRAGD 30.63653989081413 0.1413794767160703 4 TPY 3 -1 50.177 0.0 0.0 4.568 0.0 0.0 0.0 734.2717823648248 734.2717823648248 32.297210635437935 0.0 0.0 0.0 0 0.6989700043360187 1.6989700043360187 0.0 0.0 TPY 4.568 - 143 + 1 2.677 67093.3 0.5899999737739563 1020 3801 4821 HBL1_DMSO_200M_050219_2,4823 HBL1_DMSO_200M_050219_2,4823,TPVDMQTYE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4825 23.912 93.0 687450.0 25 0 94979.0 + 17673 KPTGARPSAL 10 72 499.2931762711508 996.5717996091016 2 499.2931091189384 MULTI CID FTMS 0 0 0 4824 692938.875 0.0041318503714628 57 -0.962921142578125 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 20.41453444215458 0.5050059513928961 4 KPT 3 7 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3530972304536 667.3530972304536 24.719712763997563 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPT 3.9829 + + 36 + 1 2.668 55307.0 1.0 1021 3802 4824 HBL1_DMSO_200M_050219_2,4825 HBL1_DMSO_200M_050219_2,4825,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4826 23.918 341.0 216190.0 25 0 15640.0 -1 SQIGILCPV 9 104 493.77270732829135 985.5308617233828 2 493.7725707888603 MULTI CID FTMS 0 0 0 4824 235484.40625 0.4537573154093748 -6 0.1767921447753906 2 Carbamidomethyl (C) _SQIGILC(Carbamidomethyl (C))PV_ ENSG00000134253|ENST00000256649|TRIM45;nc|ENSG00000134253|Q9H8W5-2|TRIM45 22.736283301280096 0.2418982879461534 4 {[NV]|[RG]}RNVGN[{I|L}T] 9 -1 + 35.707 0.0 0.0 3.6232 3.6232 77.109 0.0 0.0 0.0 4.137342758552698 4.498643667695752 4.137342758552698 9.208187539523756 0 0.2396518287104437 0.0 0.0 0.6989700043360187 {[NV]|[RG]}RNVGN[{I|L}T];{[NV]|[RG]}RNVGGG[{I|L}T];{[NV]|[RG]}RGGVGN[{I|L}T];[KG]P[{I|L}P]{M(Oxidation (M))|F}N[{I|L}T];{[NV]|[RG]}RNGVN[{I|L}T];[VP]{[WT]|[RM]}RN[{I|L}T];[PG]K[{I|L}P]{M(Oxidation (M))|F}N[{I|L}T];[KG]P[NS]RN[{I|L}T];{[NV]|[RG]}RGGVGGG[{I|L}T];[PG]K[NS]RN[{I|L}T] 3.6232;2.6888;2.6888;2.3508;2.3003;2.1271;2.0697;1.8666;1.7589;1.5856 -;-;-;-;-;-;-;-;-;- 513 1 2.668 66194.8 1.0 1022 3802 4824 HBL1_DMSO_200M_050219_2,4826 HBL1_DMSO_200M_050219_2,4826,SQIGILCPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4827 23.923 260.0 238900.0 25 0 27282.0 + 3191 AVVPKTKEV 9 78 485.8003749380317 969.5861969428636 2 485.8003417849541 MULTI CID FTMS 0 0 0 4824 192437.96875 0.9818569759309302 1 -0.0270881652832031 3 Unmodified _AVVPKTKEV_ ENSG00000135862|ENST00000258341|LAMC1 32.78568957990786 0.1150597335874693 4 {[VA]|[{I|L}G]}VPKT 6 3 51.273 0.0 0.0 5.2881 0.0 0.0 0.0 371.1930941217407 371.1930941217407 22.62279686003368 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.7059771852360797 0.0 + {[VA]|[{I|L}G]}VPKT 5.2881 + + 424 + 1 2.668 51765.8 1.0 1023 3802 4824 HBL1_DMSO_200M_050219_2,4827 HBL1_DMSO_200M_050219_2,4827,AVVPKTKEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4828 23.933 587.0 172190.0 25 0 17343.0 + 36617 TAPTASKI 8 113 394.7293383629733 787.4441237927466 2 394.7292663455009 MULTI CID FTMS 0 0 0 4824 152460.75 0.5505406222462356 -8 0.195077896118164 4 Unmodified _TAPTASKI_ ENSG00000140750|ENST00000289968|ARHGAP17;ENST00000570320.5_1_16:24931453-24947070:-|nuORF;ENST00000575283.5_1_16:24931453-24951019:-|nuORF;nc|ENSG00000140750|Q68EM7-2|ARHGAP17;nc|ENSG00000140750|Q68EM7-3|ARHGAP17;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;nc|ENSG00000140750|Q68EM7-6|ARHGAP17;nc|ENSG00000140750|Q68EM7-7|ARHGAP17 34.40172386719151 0.3279500639400574 4 [TA]PTASK{I|L} 8 0 + 50.773 0.0 0.0 6.4478 6.4478 92.465 0.0 0.0 0.0 37.95187050428456 9.218356431693316 9.218356431693316 46.44692462518642 0 0.7742275032520141 2.0 0.0 0.0 + + [TA]PTASK{I|L};[KS]A{[QN]|[E{I|L}]|[KN]}Q{I|L};[R{M(Oxidation (M))|F}][RV]GGP 6.4478;0.54937;0.38267 +;-;- + 143 + 1 2.668 83776.2 1.0 1024 3802 4824 HBL1_DMSO_200M_050219_2,4828 HBL1_DMSO_200M_050219_2,4828,TAPTASKI False True TAPTASKI 23.932818 394.729266345501 1740145.25 4824.0 nc|ENSG00000140750|Q68EM7-2|ARHGAP17;;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;;nc|ENSG00000140750|Q68EM7-3|ARHGAP17;;ENSG00000140750|ENST00000289968|ARHGAP17;;ENST00000575283.5_1_16:24931453-24951019:-|nuORF;;nc|ENSG00000140750|Q68EM7-7|ARHGAP17;;ENST00000570320.5_1_16:24931453-24947070:-|nuORF;;nc|ENSG00000140750|Q68EM7-6|ARHGAP17 3.6017496585845947 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4830 23.941 340.0 265030.0 25 0 28693.0 1079 AGKGPGKG 8 113 336.19544036377783 670.3763277943557 2 336.1949645876884 MULTI CID FTMS 0 0 0 4829 174812.609375 0.4244028850880973 5 -0.1450481414794922 1 Unmodified _AGKGPGKG_ ENST00000372852.3_1_1:40105296-40105449:-|nuORF 2.577480529830294 0.808687252328423 4 {[{M(Oxidation (M))|F}H]|[RQ]}[PS]A{I|L} 6 7 + 28.958 0.0 0.0 4.3196 4.3196 81.68 0.0 0.0 0.0 1.3380312008851547 17.84826562528984 1.3380312008851547 14.846843891459594 0 0.805462187404089 0.0 0.4247425010840047 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}[PS]A{I|L};[PG][WK]A{I|L} 4.3196;2.1049 -;- 58 1 2.668 76259.5 1.0 1025 3803 4829 HBL1_DMSO_200M_050219_2,4830 HBL1_DMSO_200M_050219_2,4830,AGKGPGKG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4831 23.955 800.0 127350.0 25 0 14745.0 -1 HQRMHTGRNPI 11 75 681.8410340856456 1361.667515238091 2 681.8418456912041 MULTI CID FTMS 0 0 0 4829 130224.6875 0.4362743886888328 -9 0.2221660614013672 2 Oxidation (M) _HQRM(Oxidation (M))HTGRNPI_ ENSG00000204524|ENST00000414468|ZNF805;nc|ENSG00000204524|Q5CZA5-2|ZNF805 23.78978130925829 0.5336113198261219 4 HQVDP 5 -1 58.756 0.0 0.0 4.315 0.0 0.0 0.0 782.3845919244749 782.3845919244749 38.363561833174415 0.0 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.3807196863200844 HQVDP 4.315 - 48 + 1 2.668 77307.3 0.5199999809265137 1026 3803 4829 HBL1_DMSO_200M_050219_2,4831 HBL1_DMSO_200M_050219_2,4831,HQRMHTGRNPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4832 23.965 582.0 143150.0 25 0 13929.0 + 18462 KYHVSEKPY 9 111 575.7990012793912 1149.5834496255825 2 575.7989379763603 MULTI CID FTMS 0 0 0 4829 131994.796875 0.7847977895477313 -3 0.0611228942871093 3 Unmodified _KYHVSEKPY_ ENSG00000165264|ENST00000379847|NDUFB6 47.7319792270244 0.0453426645642791 4 [{I|L}T]DVV{[ES]|[DT]|[{I|L}C]}KPY 10 4 + 73.675 0.0 0.0 6.4088 6.4088 85.776 0.0 0.0 0.0 8.666501840742214 14.385666926007213 8.666501840742214 8.666501840742214 0 1.7638793319624575 1.3010299956639813 1.1421590589602533 0.0 [{I|L}T]DVV{[ES]|[DT]|[{I|L}C]}KPY;{NN|[MP]|[D{I|L}]|[EV]}TVV{[ES]|[DT]|[{I|L}C]}KPY;[HV]YK{[ES]|[DT]|[{I|L}C]}KPY;KYHV{[ES]|[DT]|[{I|L}C]}KPY;KYH{[HG]|PP}VVDVP;[YK]HV{[ES]|[DT]|[{I|L}C]}KPY;KYHV{[HG]|PP}VDVP;[HV]{[ES]|[DT]|[{I|L}C]}KYKPY;KYHV{[ES]|[DT]|[{I|L}C]}KYP;{[TV]|[{I|L}S]}EVV{[ES]|[DT]|[{I|L}C]}KPY 6.4088;5.6549;5.2636;5.1574;4.8467;4.7986;4.7651;4.6977;4.6536;4.633 -;-;-;+;-;+;-;-;-;- + 880 1 2.668 70764.1 1.0 1027 3803 4829 HBL1_DMSO_200M_050219_2,4832 HBL1_DMSO_200M_050219_2,4832,KYHVSEKPY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4834 23.971 160.0 330070.0 25 0 59297.0 28237 PQQPAAYAL 9 76 479.7515310823304 957.4885092314609 2 479.7513610720634 MULTI CID FTMS 0 0 0 4833 364320.1875 0.7178026761567151 1 -0.0225410461425781 1 Unmodified _PQQPAAYAL_ ENSG00000157303|ENST00000375472|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;nc|ENSG00000157303|Q96L08-3|SUSD3 28.486842064014134 0.1687311288560894 4 PQD 3 7 56.682 0.0 0.0 5.9199 0.0 0.0 0.0 614.3272337923424 614.3272337923424 38.18758762624413 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.3494850021680094 PQD 5.9199 - 19 + 1 2.668 45862.7 1.0 1028 3804 4833 HBL1_DMSO_200M_050219_2,4834 HBL1_DMSO_200M_050219_2,4834,PQQPAAYAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4835 23.977 332.0 281040.0 25 0 43020.0 45381 YSYYCDQN 8 86 528.1909610858715 1054.367369238543 2 528.1910278201103 MULTI CID FTMS 0 0 0 4833 236698.453125 0.5592669246283509 3 -0.0959453582763671 2 Unmodified _YSYYCDQN_ ENSG00000134365|ENST00000608469|CFHR4;ENSG00000134365|ENST00000608469|CFHR4;nc|ENSG00000134365|Q92496-2|CFHR4;nc|ENSG00000134365|Q92496-2|CFHR4;nc|ENSG00000134365|Q92496-3|CFHR4 12.531546534597751 0.7257836412119636 4 YS 2 6 40.969 0.0 0.0 3.8857 0.0 0.0 0.0 801.2489227291638 801.2489227291638 33.979400086720375 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + YS 3.8857 + + 39 + 1 2.668 77255.2 1.0 1029 3804 4833 HBL1_DMSO_200M_050219_2,4835 HBL1_DMSO_200M_050219_2,4835,YSYYCDQN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4836 23.988 618.0 196530.0 25 0 30269.0 + 34776 SQDENYHHL 9 144 381.500503074226 1141.479679822878 3 381.5000182986259 MULTI CID FTMS 0 0 0 4833 102775.5390625 0.368826191680954 -8 0.2366065979003906 3 Unmodified _SQDENYHHL_ ENSG00000137075|ENST00000259605|RNF38;nc|ENSG00000137075|Q9H0F5-2|RNF38;nc|ENSG00000137075|Q9H0F5-3|RNF38;nc|ENSG00000137075|Q9H0F5-4|RNF38 26.88365393820708 0.1891292719743517 4 NYHH{I|L} 5 4 19.094 0.0 0.0 1.6727 0.0 0.0 459.1604608083106 0.0 459.1604608083106 0.0 5.994949130273959 0.0 0.0 0 0.0 0.0 0.0 0.0 + NYHH{I|L} 1.6727 + + 98 + 1 2.668 98626.1 1.0 1030 3804 4833 HBL1_DMSO_200M_050219_2,4836 HBL1_DMSO_200M_050219_2,4836,SQDENYHHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4838 24.003 650.0 151320.0 25 0 11968.0 + 5754 DPPASASQV 9 139 436.2112301705547 0 436.2111694216728 PEAK CID FTMS 0 0 0 4837 116823.75 0.6270276743664724 10 -0.231515884399414 1 Unmodified _DPPASASQV_ ENSG00000130816|ENST00000359526|DNMT1 64.23631603340823 0.0129441640563295 4 SASD 4 6 22.986 0.0 0.0 2.6408 0.0 0.0 245.1335066284157 262.1197603815063 507.253267009922 0.0 0.0 0.0 0.0 0 0.1694451763165201 0.0 1.2134679910804405 0.0 SASD 2.6408 - 87 + 1 2.665 80813.7 1.0 1031 3805 4837 HBL1_DMSO_200M_050219_2,4838 HBL1_DMSO_200M_050219_2,4838,DPPASASQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4839 24.005 106.0 618850.0 25 0 207180.0 + 26012 NLWYTIYIYN 10 55 454.8966756271169 1361.6681974815508 3 454.8969604372978 MULTI CID FTMS 0 0 0 4837 415481.21875 0.5982897302183541 -7 0.174081802368164 2 Unmodified _NLWYTIYIYN_ REV__ENST00000489813.1_1_3:38537858-38539466:+|nuORF 8.745405648335112 0.6861838735306406 4 [VP]YVPE 6 -1 43.237 0.0 0.0 3.1753 0.0 0.0 0.0 674.2888999564133 674.2888999564133 14.291746928241125 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 [VP]YVPE 3.1753 - 118 1 2.665 59825.4 1.0 1032 3805 4837 HBL1_DMSO_200M_050219_2,4839 HBL1_DMSO_200M_050219_2,4839,NLWYTIYIYN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4840 24.018 752.0 287700.0 25 0 22550.0 + 27144 PFPLGTPRL 9 208 333.1980830866818 996.5724198602454 3 333.1977111697197 MULTI CID FTMS 0 0 0 4837 114559.9765625 0.0028996867285366 60 -0.9584426879882812 3 Unmodified _PFPLGTPRL_ REV__ENST00000595775.5_1_19:42817488-42818494:+|nuORF 28.486842064014134 0.1687311288560894 4 QTPR{I|L} 5 -1 35.155 0.0 0.0 3.5276 0.0 0.0 383.2219410626969 0.0 383.2219410626969 0.0 12.976253585325594 0.0 0.0 0 0.3807196863200844 0.0 0.5941876774005248 0.0 QTPR{I|L} 3.5276 - 1681 1 2.665 169199.7 1.0 1033 3805 4837 HBL1_DMSO_200M_050219_2,4840 HBL1_DMSO_200M_050219_2,4840,PFPLGTPRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4842 24.024 136.0 395630.0 25 0 22966.0 -1 LVYAEMEK 8 69 512.756008608992 1023.497464284784 2 512.7562744021416 MULTI CID FTMS 0 0 0 4841 383829.25 0.8894642337938933 -3 0.0857353210449218 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LVYAEMEK_ ENST00000418814.6_2_6:71247997-71248084:+|nuORF 21.74664581756881 0.5868176546531598 4 HVDAAEK 7 -1 65.992 0.0 0.0 6.4477 0.0 0.0 255.11876735468928 0.0 255.11876735468928 0.0 52.01290421938296 0.0 0.0 0 2.504432191740108 0.0 0.5 0.3252574989159953 HVDAAEK 6.4477 - 181 + 1 2.665 46819.5 1.0 1034 3806 4841 HBL1_DMSO_200M_050219_2,4842 HBL1_DMSO_200M_050219_2,4842,LVYAEMEK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4843 24.034 568.0 183700.0 25 0 15533.0 7362 EGAPSPVVGA 10 131 442.2296885214281 882.4448241096561 2 442.2293578982353 MULTI CID FTMS 0 0 0 4841 112233.6015625 0.3725285261419014 -7 0.1659965515136718 2 Unmodified _EGAPSPVVGA_ ENST00000467891.5_1_22:50699812-50700103:-|nuORF 22.736283301280096 0.4578556481593033 4 {[DA]|[EG]}APG 5 5 40.674 0.0 0.0 4.6093 0.0 0.0 0.0 468.24688016251696 468.24688016251696 20.937714387938826 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 {[DA]|[EG]}APG 4.6093 - 258 + 1 2.665 84398.4 1.0 1035 3806 4841 HBL1_DMSO_200M_050219_2,4843 HBL1_DMSO_200M_050219_2,4843,EGAPSPVVGA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4844 24.048 800.0 132460.0 25 0 14970.0 + -1 MPTSQSPAV 9 128 467.220543248414 932.426533563628 2 467.2200195193291 MULTI CID FTMS 0 0 0 4841 112959.9296875 0.8354684512649263 -7 0.1659965515136718 3 Oxidation (M) _M(Oxidation (M))PTSQSPAV_ ENSG00000273841|ENST00000217893|TAF9 34.10243960390752 0.1078313939113124 4 YWSPAV 6 -1 22.044 0.0 0.0 2.3642 0.0 0.0 211.076876436478 0.0 211.076876436478 0.0 8.118741085077515 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.0 YWSPAV 2.3642 - 225 + 1 2.665 86312.2 0.4900000095367431 1036 3806 4841 HBL1_DMSO_200M_050219_2,4844 HBL1_DMSO_200M_050219_2,4844,MPTSQSPAV False False MPTSQSPAV 24.047565 467.220019519329 1054775.25 4841.0 ENSG00000273841|ENST00000217893|TAF9 3.864404122034709 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4845 24.061 800.0 22838.0 25 0 7197.4 -1 0 21 1134.4559867077992 3400.346130723597 3 1135.125903308392 MULTI CID FTMS 0 0 0 4841 90861.96875 1.0 0 0.0 4 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.665 27881.3 0.3400000035762787 1037 3806 4841 HBL1_DMSO_200M_050219_2,4845 HBL1_DMSO_200M_050219_2,4845, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4847 24.066 18.0 2533000.0 25 0 204420.0 + 34793 SQDPGTHVV 9 72 470.2301293578448 938.4457057824897 2 470.2303039431572 MULTI CID FTMS 0 0 0 4846 2797802.75 0.1974216349145653 8 -0.158111572265625 1 Unmodified _SQDPGTHVV_ ENSG00000130935|ENST00000253247|NOL11 46.020951573049366 0.0490941689151868 4 {[QS]|[NT]}D 3 6 41.923 0.0 0.0 4.4673 0.0 0.0 0.0 605.3049641655551 605.3049641655551 28.73544749050268 0.0 0.0 0.0 0 1.0 1.154901959985743 0.2614393726401688 0.8807196863200843 + {[QS]|[NT]}D 4.4673 + + 43 1 2.665 42315.9 1.0 1038 3807 4846 HBL1_DMSO_200M_050219_2,4847 HBL1_DMSO_200M_050219_2,4847,SQDPGTHVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4848 24.069 123.0 525020.0 25 0 58471.0 + -1 KPCLLLDPL 9 60 534.81168229843 1067.60881166366 2 534.8119994997978 MULTI CID FTMS 0 0 0 4846 578223.875 0.9631519436674324 3 -0.0289878845214843 2 Carbamidomethyl (C) _KPC(Carbamidomethyl (C))LLLDPL_ REV__ENST00000478182.5_1_3:119246651-119248702:-|nuORF 16.942295170755138 0.3780752226737986 4 KPTG 4 -1 45.433 0.0 0.0 4.2556 0.0 0.0 0.0 681.3703096979124 681.3703096979124 25.96910013008056 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTG 4.2556 - 32 + 1 2.665 55660.4 1.0 1039 3807 4846 HBL1_DMSO_200M_050219_2,4848 HBL1_DMSO_200M_050219_2,4848,KPCLLLDPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4849 24.078 516.0 218270.0 25 0 17877.0 -1 MAPPPPRSV 9 112 484.25485756529787 966.4951621973958 2 484.2550842165947 MULTI CID FTMS 0 0 0 4846 147509.359375 0.4013280991680027 25 -0.5360507965087891 3 Oxidation (M) _M(Oxidation (M))APPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 4 {[MS]|[{M(Oxidation (M))|F}A]}HKNRSG 8 -1 51.355 0.0 0.0 5.3135 0.0 0.0 0.0 66.03566156558827 66.03566156558827 30.663515298342148 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.25 0.0 {[MS]|[{M(Oxidation (M))|F}A]}HKNRSG 5.3135 - 499 + 1 2.665 89766.5 1.0 1040 3807 4846 HBL1_DMSO_200M_050219_2,4849 HBL1_DMSO_200M_050219_2,4849,MAPPPPRSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4852 24.087 67.0 860050.0 25 0 100320.0 + 36548 TAKPGVSTV 9 86 430.24786301555406 858.4811730979081 2 430.2478820681572 MULTI CID FTMS 0 0 0 4851 838114.0625 0.7485637547956713 4 -0.0775680541992187 1 Unmodified _TAKPGVSTV_ ENSG00000141867|ENST00000679869|BRD4;nc|ENSG00000141867|O60885-2|BRD4;nc|ENSG00000141867|O60885-3|BRD4 45.69961567697781 0.0497987121815769 4 [TA]PAK[TA]TV 9 5 + 34.529 0.0 0.0 4.0221 4.0221 65.333 0.0 0.0 0.0 6.041513555436161 13.216744400230889 6.041513555436161 0.7268250975604218 0 1.024227503252014 1.3979400086720375 0.2614393726401688 0.0 [TA]PAK[TA]TV;[TA]PAT[KA]TV;[TA]K[PA][TA]TV;{[TV]|[{I|L}S]}P[KQ]STV;[PG]VK[TA]STV;[KP]DK[TA]TV;[PG]VSK[TA]TV;[KP]DT[KA]TV;[PG]VST[KA]TV;[PG]VKS[TA]TV 4.0221;3.9374;2.3347;2.1002;1.1731;0.71268;0.65309;0.62801;0.56843;0.41532 -;-;-;-;-;-;-;-;-;- 201 1 2.665 52519.9 1.0 1041 3809 4851 HBL1_DMSO_200M_050219_2,4852 HBL1_DMSO_200M_050219_2,4852,TAKPGVSTV True True TAKPGVSTV 24.086617 430.247882068157 16403857.0 4851.0 nc|ENSG00000141867|O60885-3|BRD4;;ENSG00000141867|ENST00000679869|BRD4;;nc|ENSG00000141867|O60885-2|BRD4 5.931249459584554 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4853 24.09 180.0 554120.0 25 0 92933.0 + + 3234 SYGTKETSY 9 107 518.2340935593571 1034.453634185514 2 518.2336913943291 MULTI CID FTMS 0 0 0 4851 326275.03125 0.2617407018484696 -6 0.1490745544433593 2 Unmodified _AWSKMYSY_ ENSG00000100347|ENST00000350028|SAMM50 23.1484247019978 0.5573009939494978 4 [KT]GETSYSY 9 -1 + 37.837 0.0 0.0 3.6577 3.6577 75.167 0.0 0.0 0.0 4.237752511954049 23.232974809677444 4.237752511954049 8.72486274231747 0 0.5796896906561032 0.0 1.6936726795685342 0.2742275032520141 [KT]GETSYSY;[KT]TDASYSY;[KT]GETMH[MT];[HM]YSAD[PS]K;[HM]YSAD{[NV]|[RG]}V;[KT]TDAMH[MT];{[{M(Oxidation (M))|F}C]|[YS]}HMAD[PS]K;[KT]TWSH[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HSAD[PS]K;[KT]G[WM]YSY 3.6577;2.8143;2.659;2.5258;2.13;1.8156;1.7922;1.7208;1.5715;1.5008 -;-;-;-;-;-;-;-;-;- 466 1 2.665 79666.5 1.0 1042 3809 4851 HBL1_DMSO_200M_050219_2,4853 HBL1_DMSO_200M_050219_2,4853,AWSKMYSY False False SYGTKETSY 24.090467 518.233691394329 12734665.0 4851.0 ENSG00000100347|ENST00000350028|SAMM50 4.508635600407918 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4856 24.1 175.0 674810.0 25 0 105840.0 14686 IISTWHKAI 9 103 356.87718391913006 1067.6097223575905 3 356.8766967654228 MULTI CID FTMS 0 0 0 4855 354188.34375 0.8232425349969853 3 -0.1116104125976562 1 Unmodified _IISTWHKAI_ ENSG00000159314|ENST00000685559|ARHGAP27;ENST00000529357.5_1_17:43475293-43487738:-|nuORF;nc|ENSG00000159314|Q6ZUM4-2|ARHGAP27;nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27 24.020572477871973 0.2255576514309169 4 HTPR{I|L} 5 7 36.67 0.0 0.0 3.4348 0.0 0.0 445.25410659004064 0.0 445.25410659004064 0.0 23.750612633917 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 HTPR{I|L} 3.4348 - 226 1 2.665 101743.9 1.0 1043 3811 4855 HBL1_DMSO_200M_050219_2,4856 HBL1_DMSO_200M_050219_2,4856,IISTWHKAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4857 24.114 800.0 95685.0 25 0 10321.0 + 34778 SQDENYHHL 9 110 571.74755415718 1141.48055538116 2 571.7471191287041 MULTI CID FTMS 0 0 0 4855 58487.75390625 0.6179323836466536 1 -0.019693374633789 2 Unmodified _SQDENYHHL_ ENSG00000137075|ENST00000259605|RNF38;nc|ENSG00000137075|Q9H0F5-2|RNF38;nc|ENSG00000137075|Q9H0F5-3|RNF38;nc|ENSG00000137075|Q9H0F5-4|RNF38 78.14939416004806 0.0179651292570206 4 VDENYH{I|L}H 8 4 55.624 0.0 0.0 4.873 0.0 0.0 116.01202699045788 0.0 116.01202699045788 0.0 33.228694928092146 0.0 0.0 0 0.9247425010840048 0.0 0.6989700043360187 0.3807196863200844 VDENYH{I|L}H 4.873 - 236 + 1 2.665 60111.1 0.5400000214576721 1044 3811 4855 HBL1_DMSO_200M_050219_2,4857 HBL1_DMSO_200M_050219_2,4857,SQDENYHHL True True SQDENYHHL 24.114142 571.747119128704 4245624.8125 4855.0 nc|ENSG00000137075|Q9H0F5-2|RNF38;;nc|ENSG00000137075|Q9H0F5-3|RNF38;;ENSG00000137075|ENST00000259605|RNF38;;nc|ENSG00000137075|Q9H0F5-4|RNF38 7.612990379333496 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4859 24.12 162.0 227990.0 25 0 33570.0 + 45357 YSQQNQSY 8 73 509.2171648898129 1016.419776846426 2 509.2172729372978 MULTI CID FTMS 0 0 0 4858 323250.5 0.140656281832545 13 -0.3735332489013672 1 Unmodified _YSQQNQSY_ REV__ENSG00000270647|ENST00000605844|TAF15;REV__nc|ENSG00000270647|Q92804-2|TAF15 15.847184025352805 0.6768015514314958 4 SY 2 -1 20.261 0.0 0.0 1.9934 0.0 0.0 748.3133753345103 0.0 748.3133753345103 0.0 3.463464279538361 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 SY 1.9934 + + 157 + 1 2.665 34432.8 1.0 1045 3812 4858 HBL1_DMSO_200M_050219_2,4859 HBL1_DMSO_200M_050219_2,4859,YSQQNQSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4860 24.132 692.0 234410.0 25 0 11933.0 -1 0 194 332.17270767542334 331.1654312088233 1 332.1705200076103 MULTI CID FTMS 0 0 0 4858 95497.484375 1.0 0 0.0 2 4 {I|L} 1 -1 13.979 0.0 0.0 4.2213 0.0 0.0 200.07051956507172 0.0 200.07051956507172 0.0 2.870156338638594 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 4.2213 - 20 + 1 2.665 128850.1 1.0 1046 3812 4858 HBL1_DMSO_200M_050219_2,4860 HBL1_DMSO_200M_050219_2,4860, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4861 24.146 800.0 70965.0 25 0 8984.4 + -1 FWYNCWCYLPN 11 91 811.8319375602786 1621.649322187357 2 811.8336059451103 MULTI CID FTMS 0 0 0 4858 88697.453125 0.1982011458623275 -5 0.0526371002197265 3 2 Carbamidomethyl (C) _FWYNC(Carbamidomethyl (C))WC(Carbamidomethyl (C))YLPN_ REV__ENST00000272542.7_1_2:113404910-113405027:+|nuORF 0.3070304955306653 0.8736993455979228 4 QNTSTQ 6 -1 50.711 0.0 0.0 3.1271 0.0 0.0 944.3483711148946 0.0 944.3483711148946 0.0 0.3566687589218276 0.0 0.0 0 0.4247425010840047 0.0 1.4291746928241125 0.7302046884880937 QNTSTQ 3.1271 - 1423 + 1 2.665 44260.3 0.4099999964237213 1047 3812 4858 HBL1_DMSO_200M_050219_2,4861 HBL1_DMSO_200M_050219_2,4861,FWYNCWCYLPN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4862 24.159 800.0 82428.0 25 0 13692.0 7653 EKHYLFYD 8 86 557.7650232312103 1113.5154935292203 2 557.7650634646416 MULTI CID FTMS 0 0 0 4858 88406.5390625 1.0 0 0.0 4 Unmodified _EKHYLFYD_ ENSG00000122958|ENST00000263559|VPS26A;ENST00000467852.1_1_10:70884027-70917811:+|nuORF;nc|ENSG00000122958|O75436-2|VPS26A 5.230669730166228 0.792582437072536 4 K{M(Oxidation (M))|F}T 3 6 14.609 0.0 0.0 1.312 0.0 0.0 97.9683621688559 636.3463839166624 734.3147460855183 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 K{M(Oxidation (M))|F}T 1.312 - 41 + 1 2.665 55075.6 0.4399999976158142 1048 3812 4858 HBL1_DMSO_200M_050219_2,4862 HBL1_DMSO_200M_050219_2,4862,EKHYLFYD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4864 24.164 4.9 10054000.0 25 0 1010100.0 + 34149 SLLYDSIVP 9 62 503.7745561281733 1005.5345593231468 2 503.7747070193291 MULTI CID FTMS 0 0 0 4863 12636667.0 1.0 0 0.0 1 Unmodified _SLLYDSIVP_ REV__ENSG00000197386|ENST00000355072|HTT 28.486842064014134 0.1687311288560894 4 VT{I|L}DTTQ[KT] 9 -1 + 88.906 0.0 0.0 8.8417 8.8417 93.149 0.0 0.0 0.0 79.51979125970793 9.44968960007344 9.44968960007344 9.208187539523747 0 0.4247425010840047 2.0 0.805462187404089 0.5 VT{I|L}DTTQ[KT];VT{I|L}DTT[AG][KT];VT{I|L}[WM]Q[KT];VT{I|L}DT[YV][VP];VT{I|L}[WM][AG][KT] 8.8417;7.9259;6.632;6.1011;5.7109 -;-;-;-;- 114 + 1 2.657 41951.8 1.0 1049 3813 4863 HBL1_DMSO_200M_050219_2,4864 HBL1_DMSO_200M_050219_2,4864,SLLYDSIVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4865 24.178 800.0 93600.0 25 0 6319.9 + 25407 NEAESLEEPQG 11 109 601.7632130782745 1201.5118732233489 2 601.7634155154228 MULTI CID FTMS 0 0 0 4863 135396.46875 0.6338971470373079 -3 0.0689830780029296 2 Unmodified _NEAESLEEPQG_ REV__ENSG00000182670|ENST00000418766|TTC3;REV__ENST00000399586.2_1_X:74960734-74966719:-|nuORF;REV__nc|ENSG00000182670|P53804-2|TTC3;REV__nc|ENSG00000182670|P53804-3|TTC3 21.53697664764585 0.586507868110548 4 {[QD]|[EN]|[WG]|[KD]|[RS]}ANTWQQDP 10 -1 + 61.928 0.0 0.0 5.1542 5.1542 75.897 0.0 0.0 0.0 3.258402556581295 49.18826521534555 3.258402556581295 3.998163829401065 0 0.0 0.0 0.7059771852360797 1.2753187046026266 {[QD]|[EN]|[WG]|[KD]|[RS]}ANTWQQDP;{[QN]|[E{I|L}]|[KN]}ADSEAQQDP;{[QD]|[EN]|[WG]|[KD]|[RS]}AWTNQQDP;{[DA]|[EG]}GAAA{[MG]|[TS]}AQQDP;{[DA]|[EG]}QAA{[MG]|[TS]}AQQDP;{[QD]|[EN]|[WG]|[KD]|[RS]}AY[HT]QQDP;{[QD]|[EN]|[WG]|[KD]|[RS]}AAA{[MG]|[TS]}AQQDP;{[QN]|[E{I|L}]|[KN]}ADTDAQQDP;{[QD]|[EN]|[WG]|[KD]|[RS]}AW[SG]AQQDP;{[DA]|[EG]}GAAA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QQDP 5.1542;4.8214;4.7886;4.7696;4.7455;4.6998;4.6339;4.5709;4.5269;4.4674 -;-;-;-;-;-;-;-;-;- 3918 1 2.657 59610.6 0.550000011920929 1050 3813 4863 HBL1_DMSO_200M_050219_2,4865 HBL1_DMSO_200M_050219_2,4865,NEAESLEEPQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4866 24.192 800.0 169830.0 25 0 21523.0 + 23001 LSHGTSDWK 9 132 515.7531076760075 0 515.7535888552666 PEAK CID FTMS 0 0 0 4863 87642.1171875 0.9955301298480018 -1 0.0453338623046875 3 Unmodified _LSHGTSDWK_ REV__ENSG00000139144|ENST00000538779|PIK3C2G;REV__nc|ENSG00000139144|O75747-2|PIK3C2G 16.942295170755138 0.2326366549411506 4 VT{I|L} 3 -1 11.529 0.0 0.0 1.1199 0.0 0.0 150.0870556789194 563.1812227838499 713.2682784627693 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 VT{I|L} 1.1199 - 344 + 1 2.657 105426.3 0.4600000083446502 1051 3813 4863 HBL1_DMSO_200M_050219_2,4866 HBL1_DMSO_200M_050219_2,4866,LSHGTSDWK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4867 24.206 800.0 96229.0 25 0 9607.4 + 13724 HQTQVSQRL 9 94 548.7963336304176 1095.5781143276351 2 548.7969848513603 MULTI CID FTMS 0 0 0 4863 86097.71875 0.9134153645295888 -4 0.0775680541992187 4 Unmodified _HQTQVSQRL_ ENSG00000136270|ENST00000258770|TBRG4;ENST00000484326.1_1_7:45143607-45145060:-|nuORF;ENST00000488222.5_1_7:45142883-45145249:-|nuORF 31.26834338654808 0.1333407332142048 4 HQTQV 5 4 56.37 0.0 0.0 5.1452 0.0 0.0 0.0 499.26409137232673 499.26409137232673 46.28144697160131 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.3807196863200844 0.7742275032520141 + HQTQV 5.1452 + + 85 + 1 2.657 67735.3 0.449999988079071 1052 3813 4863 HBL1_DMSO_200M_050219_2,4867 HBL1_DMSO_200M_050219_2,4867,HQTQVSQRL False True HQTQVSQRL 24.206025 548.79698485136 546807.9375 4863.0 ENSG00000136270|ENST00000258770|TBRG4;;ENST00000488222.5_1_7:45142883-45145249:-|nuORF;;ENST00000484326.1_1_7:45143607-45145060:-|nuORF 5.355826536814372 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4869 24.212 161.0 432200.0 25 0 58286.0 + 17617 KPTAAFHLL 9 68 499.2931762711508 996.5717996091016 2 499.2933837771416 MULTI CID FTMS 0 0 0 4868 465513.78125 0.0027757618447642 69 -1.0187320709228516 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 4 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3533711775706 667.3533711775706 23.29303772831025 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 27 + 1 2.657 60411.9 1.0 1053 3814 4868 HBL1_DMSO_200M_050219_2,4869 HBL1_DMSO_200M_050219_2,4869,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4870 24.22 443.0 240310.0 25 0 28946.0 -1 HQRMHTGRNPI 11 62 681.8410340856456 1361.667515238091 2 681.8414794802666 MULTI CID FTMS 0 0 0 4868 257520.6875 0.8627371865552792 2 -0.039031982421875 2 Oxidation (M) _HQRM(Oxidation (M))HTGRNPI_ ENSG00000204524|ENST00000414468|ZNF805;nc|ENSG00000204524|Q5CZA5-2|ZNF805 23.78978130925829 0.5336113198261219 4 HQVDPTE[VP]{[QG]|[NA]}R 12 -1 + 79.836 0.0 0.0 5.8631 5.8631 90.854 0.0 0.0 0.0 65.85647216221645 1.572355395636862 1.572355395636862 79.83587224893682 0 1.8494850021680087 0.0 0.8494850021680094 0.805462187404089 HQVDPTE[VP]{[QG]|[NA]}R 5.8631 - 80 + 1 2.657 80103.2 1.0 1054 3814 4868 HBL1_DMSO_200M_050219_2,4870 HBL1_DMSO_200M_050219_2,4870,HQRMHTGRNPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4872 24.231 517.0 143260.0 25 0 12800.0 + 34258 SLQGARNQL 9 110 493.77270732829135 985.5308617233828 2 493.7726623415947 MULTI CID FTMS 0 0 0 4871 122338.5234375 0.2357353544132898 7 -0.2505149841308594 1 Unmodified _SLQGARNQL_ REV__ENST00000397863.5_1_18:74726690-74726957:-|nuORF 14.838274106304384 0.4350285940865338 4 {[NV]|[RG]}RNVGN[{I|L}T] 9 -1 + 28.866 0.0 0.0 2.9289 2.9289 71.289 0.0 0.0 0.0 2.051368718728817 5.859915880306296 2.051368718728817 6.33925646871916 0 0.2302046884880938 0.0 0.0 0.3252574989159953 {[NV]|[RG]}RNVGN[{I|L}T];[KG]P[{I|L}P]{M(Oxidation (M))|F}N[{I|L}T];[VP]{[WT]|[RM]}RN[{I|L}T];{[NV]|[RG]}RGGVGN[{I|L}T];{[NV]|[RG]}RNVGGG[{I|L}T];[KG]P[NS]RN[{I|L}T];{[TV]|[{I|L}S]}[WP]RN[{I|L}T];[KG]P[{I|L}P]{M(Oxidation (M))|F}GG[{I|L}T];[VP]{[WT]|[RM]}RGG[{I|L}T];{[NV]|[RG]}RGGVGGG[{I|L}T] 2.9289;2.2857;2.0683;1.9946;1.9946;1.8016;1.751;1.3514;1.1285;1.0647 -;-;-;-;-;-;-;-;-;- 501 1 2.657 60948.0 1.0 1055 3815 4871 HBL1_DMSO_200M_050219_2,4872 HBL1_DMSO_200M_050219_2,4872,SLQGARNQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4873 24.245 800.0 111950.0 25 0 7220.1 + 43199 VYYKSTEKSGM 11 98 646.813820808702 1291.6130886842038 2 646.8136474490166 MULTI CID FTMS 0 0 0 4871 146565.40625 1.0 0 0.0 2 Unmodified _VYYKSTEKSGM_ ENSG00000218739|ENST00000402297|CEBPZOS 64.69154705217129 0.0501048056983406 4 VYYKSTEKSGM 11 0 + 116.58 0.0 0.0 9.0258 9.0258 91.256 0.0 0.0 0.0 86.7357141034147 14.190166918179614 14.190166918179614 7.7815125038364386 0 1.960409376976188 2.0 0.3054621874040891 0.0 + + VYYKSTEKSGM;VYYKSETKSGM;VYYKSTEK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};VYYKST{[TV]|[{I|L}S]}GSGM;VYYKSETK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};VYYKSTE{M(Oxidation (M))|F}QQ;VYYK[WM]KSGM;VYYKSEPY{I|L}M;VYYKST{[TV]|[{I|L}S]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};VYYKSET{M(Oxidation (M))|F}QQ 9.0258;8.4234;7.9005;7.7912;7.2981;7.2419;7.0275;6.667;6.6632;6.6394 +;-;-;-;-;-;-;-;-;- + 991 + 1 2.657 68908.3 0.550000011920929 1056 3815 4871 HBL1_DMSO_200M_050219_2,4873 HBL1_DMSO_200M_050219_2,4873,VYYKSTEKSGM True True VYYKSTEKSGM 24.245016 646.813647449017 781964.5 4871.0 ENSG00000218739|ENST00000402297|CEBPZOS 9.46514924367269 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4875 24.261 800.0 185300.0 25 0 18106.0 + 34777 SQDENYHHL 9 160 381.500503074226 1141.479679822878 3 381.5001708865166 MULTI CID FTMS 0 0 0 4874 142593.328125 0.5117185922953321 4 -0.1513957977294922 1 Unmodified _SQDENYHHL_ ENSG00000137075|ENST00000259605|RNF38;nc|ENSG00000137075|Q9H0F5-2|RNF38;nc|ENSG00000137075|Q9H0F5-3|RNF38;nc|ENSG00000137075|Q9H0F5-4|RNF38 26.88365393820708 0.1891292719743517 4 NYHH{I|L} 5 4 23.285 0.0 0.0 2.0399 0.0 0.0 459.1593721818978 0.0 459.1593721818978 0.0 9.305879070655614 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + NYHH{I|L} 2.0399 + + 202 + 1 2.657 119604.1 0.6899999976158142 1057 3816 4874 HBL1_DMSO_200M_050219_2,4875 HBL1_DMSO_200M_050219_2,4875,SQDENYHHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4876 24.269 408.0 226870.0 25 0 26988.0 + -1 LCFQTSGV 8 93 477.22517546803306 952.435798002866 2 477.2245056033134 MULTI CID FTMS 0 0 0 4874 114003.7421875 0.8134501507219245 -1 0.0254745483398437 2 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))LC(Carbamidomethyl (C))FQTSGV_ REV__nc|ENSG00000113558|P63208-2|SKP1 10.183394434864962 0.7604730176254005 4 [{M(Oxidation (M))|F}T]EV[KS]SGV 9 -1 [{M(Oxidation (M))|F}T]E + + 28.435 5.9421 1.5757 2.9855 2.9855 45.89 0.0 0.0 0.0 0.0 14.94009708316895 0.0 0.0 0 0.4247425010840047 0.0 0.4802046884880938 0.0 [{M(Oxidation (M))|F}T]EV[KS]SGV 2.9855 - 157 + 1 2.657 75606.5 1.0 1058 3816 4874 HBL1_DMSO_200M_050219_2,4876 HBL1_DMSO_200M_050219_2,4876,LCFQTSGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4877 24.282 800.0 69262.0 25 0 6409.4 -1 REMHCRFCLCC 11 72 822.8223990450161 1643.6302451568322 2 822.8210327029228 MULTI CID FTMS 0 0 0 4874 96913.65625 1.0 0 0.0 3 4 Carbamidomethyl (C),Oxidation (M) _REM(Oxidation (M))HC(Carbamidomethyl (C))RFC(Carbamidomethyl (C))LC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000402802.7_1_7:536981-537197:-|nuORF 0.3070304955306653 0.8736993455979228 4 {[YD]|[{M(Oxidation (M))|F}M]}GSYSGNTAAY{M(Oxidation (M))|F}TQ 15 -1 + 114.97 0.0 0.0 6.9947 6.9947 86.402 0.0 0.0 0.0 27.61760834195473 18.19476549204211 18.19476549204211 6.690067809585756 0 1.3494850021680094 2.0 0.9802046884880936 1.341129063296272 {[YD]|[{M(Oxidation (M))|F}M]}GSYSGNTAAY{M(Oxidation (M))|F}TQ;{[YD]|[{M(Oxidation (M))|F}M]}GSYSGN{[QD]|[EN]|[WG]|[KD]|[RS]}Y{M(Oxidation (M))|F}TQ;{[YD]|[{M(Oxidation (M))|F}M]}GSYSGGGTAAY{M(Oxidation (M))|F}TQ;{[YD]|[{M(Oxidation (M))|F}M]}GSYSGGG{[QD]|[EN]|[WG]|[KD]|[RS]}Y{M(Oxidation (M))|F}TQ;{[YD]|[{M(Oxidation (M))|F}M]}GSYEETAAY{M(Oxidation (M))|F}TQ;{[YD]|[{M(Oxidation (M))|F}M]}GSYSYY[HN]{M(Oxidation (M))|F}TQ;{[YD]|[{M(Oxidation (M))|F}M]}GSYEEQDY{M(Oxidation (M))|F}TQ;{[YD]|[{M(Oxidation (M))|F}M]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SGNTAAY{M(Oxidation (M))|F}TQ;{[YD]|[{M(Oxidation (M))|F}M]}GSYSGNTQ[W{M(Oxidation (M))|F}][YG];{[YD]|[{M(Oxidation (M))|F}M]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SGN{[QD]|[EN]|[WG]|[KD]|[RS]}Y{M(Oxidation (M))|F}TQ 6.9947;6.5877;6.4453;6.0371;5.6301;5.512;5.4638;5.2506;5.0567;4.8449 -;-;-;-;-;-;-;-;-;- 796 + 1 2.657 44096.1 0.4099999964237213 1059 3816 4874 HBL1_DMSO_200M_050219_2,4877 HBL1_DMSO_200M_050219_2,4877,REMHCRFCLCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4879 24.287 107.0 504970.0 25 0 175960.0 + + 34757 HQVDPTEPVGGAR 13 63 454.8966756271169 1361.6681974815508 3 454.8968078494072 MULTI CID FTMS 0 0 0 4878 310186.09375 0.4466655674725913 5 -0.1875743865966797 1 Unmodified _SQALREMRWW_ nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 11.494710602746466 0.654671931888957 4 [VP]YVPE 6 -1 46.203 0.0 0.0 3.3931 0.0 0.0 0.0 674.2898765189133 674.2898765189133 22.073259432077563 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.3494850021680094 0.0 [VP]YVPE 3.3931 - 80 1 2.657 50845.7 1.0 1060 3817 4878 HBL1_DMSO_200M_050219_2,4879 HBL1_DMSO_200M_050219_2,4879,SQALREMRWW False False HQVDPTEPVGGAR 24.287284 454.896807849407 16605230.5 4878.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 11.169514656066896 3.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4880 24.293 297.0 210540.0 25 0 19569.0 + + 3591 DAAPGPEKV 9 95 442.2296885214281 882.4448241096561 2 442.2299377322197 MULTI CID FTMS 0 0 0 4878 175282.28125 0.581801251887031 4 -0.1431007385253906 2 Unmodified _DAALALFY_ ENSG00000101544|ENST00000262198|ADNP2 26.34127834903884 0.4900704351052977 4 {[DA]|[EG]}APS 5 -1 47.747 0.0 0.0 5.4108 0.0 0.0 0.0 438.23212610416255 438.23212610416255 34.25250945692483 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.0 0.0 {[DA]|[EG]}APS 5.4108 - 172 + 1 2.657 52421.2 1.0 1061 3817 4878 HBL1_DMSO_200M_050219_2,4880 HBL1_DMSO_200M_050219_2,4880,DAALALFY False False DAAPGPEKV 24.292712 442.22993773222 3480189.25 4878.0 ENSG00000101544|ENST00000262198|ADNP2 6.157954692840576 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4881 24.294 71.0 660180.0 25 0 85220.0 + 38269 TPYNSRTV 8 66 469.2407275052405 936.466902077281 2 469.2408325076103 MULTI CID FTMS 0 0 0 4878 511428.6875 1.0 0 0.0 3 Unmodified _TPYNSRTV_ ENSG00000131389|ENST00000622186|SLC6A6 13.042465956692816 0.7182358012947757 4 TPYN[KT]Y 7 3 49.001 0.0 0.0 5.2326 0.0 0.0 0.0 66.03566156558827 66.03566156558827 37.30667903510216 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 TPYN[KT]Y 5.2326 - 96 + 1 2.657 45710.2 1.0 1062 3817 4878 HBL1_DMSO_200M_050219_2,4881 HBL1_DMSO_200M_050219_2,4881,TPYNSRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4882 24.304 520.0 162990.0 25 0 35199.0 + 5854 DPVRPSSSV 9 104 472.2461554416864 942.4777579501728 2 472.2466308474541 MULTI CID FTMS 0 0 0 4878 132711.140625 1.0 0 0.0 4 Unmodified _DPVRPSSSV_ ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX 59.36838082759317 0.0264317782606298 4 [DP]VRRDSV 8 3 + 72.689 0.0 0.0 7.7125 7.7125 87.015 0.0 0.0 0.0 2.961375739651388 2.961375739651388 2.961375739651388 5.686304014203984 0 2.2302046884880937 1.6989700043360187 0.7302046884880937 0.0 [DP]VRRDSV;[DP]VREAASV;[DP]VRRSDV;[DP]V[VG]RDSV;[DP]VR[VG]DSV;[DP]VR[PS]SSV;[DP]V[VG]EAASV;[DP]V[VG]RSDV;[DP]VR[VG]SDV;[DP]V[VG][VG]DSV 7.7125;7.1092;7.0974;6.7298;6.7298;6.1721;6.1322;6.1147;6.1147;5.7527 -;-;-;-;-;+;-;-;-;- + 333 1 2.657 73305.7 1.0 1063 3817 4878 HBL1_DMSO_200M_050219_2,4882 HBL1_DMSO_200M_050219_2,4882,DPVRPSSSV True True DPVRPSSSV 24.30353 472.246630847454 727327.3125 4878.0 ENSG00000107290|ENST00000224140|SETX;;nc|ENSG00000107290|Q7Z333-4|SETX;;nc|ENSG00000107290|Q7Z333-3|SETX 7.693970680236816 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4883 24.317 800.0 113540.0 25 0 6724.4 + 5726 DPLQAKKV 8 117 449.7712052824302 897.5278576316604 2 449.7712585330009 MULTI CID FTMS 0 0 0 4878 90625.046875 1.0 0 0.0 5 Unmodified _DPLQAKKV_ ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081|TCF12 68.08070601005525 0.1147890174299629 4 DP{I|L}QAKKV 8 0 + 70.628 0.0 0.0 7.8692 7.8692 85.002 0.0 0.0 0.0 27.2515682702941 3.756636139608858 3.756636139608858 3.756636139608858 0 1.4489700043360187 2.0 0.0 0.8494850021680094 + + DP{I|L}QAKKV;DP{I|L}QAKVK;DP{I|L}[AG]AKKV;DP{I|L}[AG]AKVK;KKA{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]N;[KA]K{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]N 7.8692;7.4507;6.8373;6.4187;0.12665;0.12665 +;-;-;-;-;- + 322 + 1 2.657 74617.0 0.4399999976158142 1064 3817 4878 HBL1_DMSO_200M_050219_2,4883 HBL1_DMSO_200M_050219_2,4883,DPLQAKKV True True DPLQAKKV 24.317347 449.771258533001 560455.125 4878.0 nc|ENSG00000140262|Q99081|TCF12;;ENSG00000140262|ENST00000333725|TCF12 5.261899471282959 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4885 24.335 800.0 278370.0 25 0 18582.0 20543 LLLSTLSRE 9 212 344.54193577184344 1030.6039779157304 3 344.5414001345634 MULTI CID FTMS 0 0 0 4884 74407.234375 0.2457375522572414 86 -1.389535903930664 1 Unmodified _LLLSTLSRE_ ENST00000377041.6_1_9:74489904-74489970:-|nuORF 13.90604991867851 0.4602628045680013 4 {I|L}KT 3 7 25.49 0.0 0.0 2.4733 0.0 0.0 0.0 685.3677882876311 685.3677882876311 4.520534381044499 0.0 0.0 0.0 0 0.2059771852360797 0.0 0.0 0.3252574989159953 {I|L}KT 2.4733 - 92 + 1 2.657 176727.4 0.9200000166893004 1065 3818 4884 HBL1_DMSO_200M_050219_2,4885 HBL1_DMSO_200M_050219_2,4885,LLLSTLSRE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4886 24.341 386.0 340620.0 25 0 30186.0 + 4227 DAPKDYRQV 9 147 364.52119972514095 1090.541769775623 3 364.5206176638603 MULTI CID FTMS 0 0 0 4884 99602.796875 0.6278777414213924 -1 0.0348663330078125 2 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 41.8396318013385 0.0653578398400075 4 {[DA]|[EG]}PKDY[RN]{I|L} 9 2 + 62.778 0.0 0.0 5.7566 5.7566 85.372 0.0 0.0 0.0 32.1974738267794 5.845226171627047 5.845226171627047 9.247518169080353 0 0.4247425010840047 2.0 0.0 1.6237125054200234 {[DA]|[EG]}PKDY[RN]{I|L};{[DA]|[EG]}PKV{[ES]|[DT]|[{I|L}C]}QA{M(Oxidation (M))|F};WPKDYVV{[QG]|[NA]};{[DA]|[EG]}PK[W{M(Oxidation (M))|F}]{[QS]|[NT]}{I|L};{[DA]|[EG]}PKV{[ES]|[DT]|[{I|L}C]}[AG]A{M(Oxidation (M))|F};{[DA]|[EG]}PK[W{M(Oxidation (M))|F}][QT]V;{[DA]|[EG]}V[KP]{[ES]|[DT]|[{I|L}C]}QA{M(Oxidation (M))|F};{[DA]|[EG]}P[YR][{I|L}A]T{[QG]|[NA]};[YE][RV]DKP{[QG]|[NA]};[YE]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KP{[QG]|[NA]} 5.7566;4.9086;3.9926;3.8128;3.6788;3.6617;2.4834;1.9539;1.8615;1.4966 -;-;-;-;-;-;-;-;-;- 289 + 1 2.657 112949.5 1.0 1066 3818 4884 HBL1_DMSO_200M_050219_2,4886 HBL1_DMSO_200M_050219_2,4886,DAPKDYRQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4887 24.355 800.0 158700.0 25 0 17719.0 + 4230 DAPKDYRQV 9 109 546.2765499239614 0 546.2773925662041 PEAK CID FTMS 0 0 0 4884 95493.796875 0.9608331303955064 -1 0.0348663330078125 3 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 22.65808497894818 0.176975000361068 4 APKDY 5 4 28.148 0.0 0.0 2.5811 0.0 0.0 115.0254074456496 398.2168673151001 513.2422747607496 0.0 0.0 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 + APKDY 2.5811 + + 40 + 1 2.657 105857.1 0.4799999892711639 1067 3818 4884 HBL1_DMSO_200M_050219_2,4887 HBL1_DMSO_200M_050219_2,4887,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4889 24.36 83.0 720510.0 25 0 102210.0 + 36282 SYGTKETSY 9 83 518.2340935593571 1034.453634185514 2 518.2347289919853 MULTI CID FTMS 0 0 0 4888 381682.03125 0.3061886849250727 4 -0.1210384368896484 1 Unmodified _SYGTKETSY_ ENSG00000100347|ENST00000350028|SAMM50 13.90604991867851 0.4602628045680013 4 [KT]GETSYSY 9 6 [KT]GETSY + + 20.049 11.445 1.4934 1.9382 1.9382 44.536 0.0 0.0 0.0 0.0 2.962118860987953 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 [KT]GETSYSY 1.9382 - 114 + 1 2.657 49395.7 1.0 1068 3819 4888 HBL1_DMSO_200M_050219_2,4889 HBL1_DMSO_200M_050219_2,4889,SYGTKETSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4890 24.374 800.0 112470.0 25 0 11065.0 + 17698 KPTGVRTNVP 10 94 534.81168229843 1067.60881166366 2 534.8116943240166 MULTI CID FTMS 0 0 0 4888 84015.4296875 0.1399451456437528 15 -0.312814712524414 2 Unmodified _KPTGVRTNVP_ ENSG00000165458|ENST00000298229|INPPL1;nc|ENSG00000165458|O15357-2|INPPL1 14.40537977576856 0.6058337302021266 4 KPT 3 7 39.693 0.0 0.0 3.7179 0.0 0.0 0.0 738.3895050136442 738.3895050136442 18.723637474483468 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPT 3.7179 + + 31 + 1 2.657 73825.7 0.6200000047683716 1069 3819 4888 HBL1_DMSO_200M_050219_2,4890 HBL1_DMSO_200M_050219_2,4890,KPTGVRTNVP False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4891 24.383 489.0 243640.0 25 0 96242.0 -1 0 111 488.2677906444855 487.2605141778855 1 488.2669555544853 MULTI CID FTMS 0 0 0 4888 143652.953125 0.6382403461155338 -12 0.2938690185546875 3 4 [YV]D 3 -1 18.952 0.0 0.0 3.8896 0.0 0.0 0.0 107.07796347891988 107.07796347891988 6.44348130295128 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YV]D 3.8896 - 103 1 2.657 95417.2 1.0 1070 3819 4888 HBL1_DMSO_200M_050219_2,4891 HBL1_DMSO_200M_050219_2,4891, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4892 24.396 800.0 214000.0 25 0 27550.0 28134 PPPPHPPPP 9 122 466.7530695752682 931.4915862173364 2 466.7533752322197 MULTI CID FTMS 0 0 0 4888 88238.7265625 0.2525016867640108 -8 0.26092529296875 4 Unmodified _PPPPHPPPP_ ENSG00000175879|ENST00000313173|HOXD8;nc|ENSG00000175879|P13378-2|HOXD8;REV__ENSG00000175879|ENST00000313173|HOXD8;REV__nc|ENSG00000175879|P13378-2|HOXD8 56.04830969593885 0.0282699710924866 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPPPP 9 2 + 50.697 0.0 0.0 5.4425 5.4425 76.871 0.0 0.0 0.0 3.807196863200844 8.697114610913488 3.807196863200844 3.807196863200844 0 1.579689690656103 0.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPPPP;{[HG]|PP}HPPPPPP;[YK]HPPPPP;{[HG]|PP}PHPPPPP;[YK]PHPPPP;{[HG]|PP}PPHPPPP;{[NV]|[RG]}{[QS]|[NT]}PPPPP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]PPPP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YK]PPP;{[HG]|PP}H[YK]PPP 5.4425;5.0338;4.5274;4.3875;3.881;3.7411;3.4781;2.9717;2.6013;2.1926 -;-;-;-;-;+;-;-;-;- + 221 1 2.657 133547.0 0.449999988079071 1071 3819 4888 HBL1_DMSO_200M_050219_2,4892 HBL1_DMSO_200M_050219_2,4892,PPPPHPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4894 24.405 238.0 122420.0 25 0 17529.0 + -1 FWYNCWCYLPN 11 45 811.8319375602786 1621.649322187357 2 811.8326293826103 MULTI CID FTMS 0 0 0 4893 213151.921875 0.4763040388413894 3 -0.079925537109375 1 2 Carbamidomethyl (C) _FWYNC(Carbamidomethyl (C))WC(Carbamidomethyl (C))YLPN_ REV__ENST00000272542.7_1_2:113404910-113405027:+|nuORF 0.3070304955306653 0.8736993455979228 4 STQ 3 -1 38.06 0.0 0.0 2.347 0.0 0.0 1287.501081075832 0.0 1287.501081075832 0.0 4.387568628841265 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.75 STQ 2.347 - 163 + 1 2.666 24962.2 1.0 1072 3820 4893 HBL1_DMSO_200M_050219_2,4894 HBL1_DMSO_200M_050219_2,4894,FWYNCWCYLPN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4895 24.406 53.0 1247400.0 25 0 81710.0 + 28922 QAPVAAHTV 9 92 447.2456020747893 892.4766512163786 2 447.2456237673759 MULTI CID FTMS 0 0 0 4893 1087432.125 0.7403631256746129 -4 0.1513957977294922 2 Unmodified _QAPVAAHTV_ ENSG00000056097|ENST00000265069|ZFR;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 57.47134341890925 0.0274820932774257 4 [QA][VP]AAH{[TV]|[{I|L}S]} 9 0 + 40.272 0.0 0.0 4.5124 4.5124 82.252 0.0 0.0 0.0 22.34952748802746 14.308393193703338 14.308393193703338 14.308393193703338 0 0.3054621874040891 2.0 1.3996498648046138 0.0 + + [QA][VP]AAH{[TV]|[{I|L}S]};[QA][{I|L}T]AA[YR] 4.5124;2.9092 +;- + 104 + 1 2.666 57724.5 1.0 1073 3820 4893 HBL1_DMSO_200M_050219_2,4895 HBL1_DMSO_200M_050219_2,4895,QAPVAAHTV True True QAPVAAHTV 24.406121 447.2463 7710252.0 4893.0 ENSG00000056097|ENST00000265069|ZFR;;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 5.270950635274251 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4896 24.415 515.0 139860.0 25 0 18794.0 -1 VYVCVCVLS 9 100 549.7691752376667 1097.5237975421333 2 549.7693359255791 MULTI CID FTMS 0 0 0 4893 196833.109375 0.3956154407525529 -5 0.1768703460693359 3 2 Carbamidomethyl (C) _VYVC(Carbamidomethyl (C))VC(Carbamidomethyl (C))VLS_ ENST00000409535.6_1_3:51699723-51699894:+|nuORF 18.13498045792455 0.3457906370836843 4 [YV]VSQSAAHH 10 -1 + 41.136 0.0 0.0 3.7481 3.7481 70.703 0.0 0.0 0.0 9.82856974845091 7.269987279362624 7.269987279362624 4.0502448676914256 0 0.0 1.3010299956639813 0.8494850021680094 0.0 [YV]VSQSAAHH;[YV]{[QS]|[NT]}VSAAHH;[YV]VS[AG]SAAHH;{[QS]|[NT]}VYVSAAHH;[YV]{[QS]|[NT]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AHH;[VS]QYVSAAHH;[YV]VSQ[QT]HH;{[QS]|[NT]}VY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AHH;[YV]TNV[QT]HH;[Y{M(Oxidation (M))|F}]AVASG{[ES]|[DT]|[{I|L}C]}PA 3.7481;3.3791;2.9131;2.8526;2.4935;2.3457;2.0408;1.967;1.9216;1.522 -;-;-;-;-;-;-;-;-;- 670 1 2.666 58720.1 1.0 1074 3820 4893 HBL1_DMSO_200M_050219_2,4896 HBL1_DMSO_200M_050219_2,4896,VYVCVCVLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4897 24.426 594.0 135020.0 25 0 8607.4 -1 YSMCNSFQWIQ 11 107 474.8636718251179 1421.5691860755535 3 474.8640319705009 MULTI CID FTMS 0 0 0 4893 170724.421875 1.0 0 0.0 4 Oxidation (M) _YSM(Oxidation (M))CNSFQWIQ_ ENSG00000119686|ENST00000238667|FLVCR2 2.843284757254958 0.8617331327080043 4 CPYDKNHQ{I|L} 9 -1 52.499 0.0 0.0 3.693 0.0 0.0 305.0660764931202 0.0 305.0660764931202 0.0 31.83713411167445 0.0 0.0 0 0.0 0.0 0.0 2.217900182820548 CPYDKNHQ{I|L} 3.693 - 697 + 1 2.666 68671.1 1.0 1075 3820 4893 HBL1_DMSO_200M_050219_2,4897 HBL1_DMSO_200M_050219_2,4897,YSMCNSFQWIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4899 24.43 54.0 865090.0 25 0 73178.0 + 34150 SLLYDSIVP 9 76 503.7745561281733 1005.5345593231468 2 503.7746154665947 MULTI CID FTMS 0 0 0 4898 1009243.4375 0.0798662683364213 8 -0.1442718505859375 1 Unmodified _SLLYDSIVP_ REV__ENSG00000197386|ENST00000355072|HTT 28.486842064014134 0.1687311288560894 4 VT{I|L}DTTQ[KT] 9 -1 + 82.885 0.0 0.0 8.2429 8.2429 92.258 0.0 0.0 0.0 73.00845473356839 9.44968960007344 9.44968960007344 9.208187539523747 0 0.4247425010840047 2.0 0.805462187404089 0.5 VT{I|L}DTTQ[KT];VT{I|L}DTT[AG][KT];VT{I|L}[WM]Q[KT];VT{I|L}[WM][AG][KT];VT{I|L}DT[YV][VP] 8.2429;7.3272;6.632;5.7109;5.6266 -;-;-;-;- 164 + 1 2.666 44284.8 1.0 1076 3821 4898 HBL1_DMSO_200M_050219_2,4899 HBL1_DMSO_200M_050219_2,4899,SLLYDSIVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4900 24.444 800.0 155060.0 25 0 22781.0 + 19209 LEGEESRMSGE 11 100 612.2640420058273 1222.5135310784544 2 612.2637817263603 MULTI CID FTMS 0 0 0 4898 189142.203125 0.5508699212424136 -5 0.1805667877197265 2 Unmodified _LEGEESRMSGE_ CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__Q7Z794;ENSG00000167768|ENST00000252244|KRT1;ENSG00000189182|ENST00000341809|KRT77 97.28384467902475 0.0004116277222994 4 {I|L}EGEESRMSGE 11 0 + 128.58 0.0 0.0 10.518 10.518 97.866 0.0 0.0 0.0 93.72203897946504 21.620095109179005 21.620095109179005 21.537209583838205 0 2.518930178484529 2.0 2.5495462078546405 0.0 + + {I|L}EGEESRMSGE;{I|L}EWES[VG]MSGE;{I|L}EWESP[YN]GE;{I|L}EWWWMSGE;{I|L}EGRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))SGE;{I|L}WEES[VG]MSGE;{I|L}WEESP[YN]GE;{I|L}WEWWMSGE;{I|L}E{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}[YT]SGE;{I|L}{M(Oxidation (M))|F}G[HC]SRMSGE 10.518;8.7563;8.1906;8.1766;6.9737;6.8996;6.3339;6.3199;5.7838;5.6298 +;-;-;-;-;-;-;-;-;- + 1012 + 1 2.666 95540.8 0.5 1077 3821 4898 HBL1_DMSO_200M_050219_2,4900 HBL1_DMSO_200M_050219_2,4900,LEGEESRMSGE True True LEGEESRMSGE 24.444204 612.26378172636 1265411.125 4898.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253 9.088765462239584 2.0 True 11.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 4901 24.456 693.0 310670.0 25 0 39382.0 + 13055 HAWDHAKSV 9 191 350.8422306672844 1049.5048626020532 3 350.8419067263603 MULTI CID FTMS 0 0 0 4898 196592.953125 0.2860223437505115 -10 0.3312091827392578 3 Unmodified _HAWDHAKSV_ ENSG00000048162|ENST00000614830|NOP16;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;ENST00000510608.1_1_5:175813700-175815552:-|nuORF;nc|ENSG00000048162|Q9Y3C1-2|NOP16;nc|ENSG00000048162|Q9Y3C1-3|NOP16 90.13494162714682 0.0149365284241176 4 [HA]WDHAKSV 9 0 + 98.427 0.0 0.0 9.3784 9.3784 95.15 0.0 0.0 0.0 20.355443491087826 67.92342188037523 20.355443491087826 10.752574989159951 0 1.916386562212267 1.6989700043360187 1.7658715643802765 0.0 + + [HA]WDHAKSV;[HA]WDAHKSV;[HD]WAHAKSV;[HA]WDAKHSV;[HA]WDKAHSV;[HD]WAAHKSV;[HA]WDAKSHV;[HA]WDKSAHV;[HA]WDKASHV;HAWDHAKSV 9.3784;8.3538;7.3704;7.24;6.8608;6.3459;6.1614;5.8895;5.7822;5.5899 +;-;-;-;-;-;-;-;-;+ + 3332 1 2.666 182879.8 1.0 1078 3821 4898 HBL1_DMSO_200M_050219_2,4901 HBL1_DMSO_200M_050219_2,4901,HAWDHAKSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4902 24.47 800.0 151900.0 25 0 7149.7 -1 GTVRWPLCLQP 11 141 442.90519901978337 1325.69376765955 3 442.9055969119072 MULTI CID FTMS 0 0 0 4898 90702.5078125 0.5210267824846927 -2 0.0702838897705078 4 Carbamidomethyl (C) _GTVRWPLC(Carbamidomethyl (C))LQP_ ENST00000563209.1_1_16:58545213-58545477:+|nuORF 10.315234532428624 0.8205777915985574 4 {[SA]|[TG]}TADK{I|L}A 8 -1 76.988 0.0 0.0 5.8073 0.0 0.0 0.0 565.2732637994749 565.2732637994749 51.355220506052696 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 1.6989700043360187 {[SA]|[TG]}TADK{I|L}A 5.8073 - 568 + 1 2.666 98977.0 0.4399999976158142 1079 3821 4898 HBL1_DMSO_200M_050219_2,4902 HBL1_DMSO_200M_050219_2,4902,GTVRWPLCLQP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4904 24.476 195.0 312210.0 25 0 42750.0 + 17618 KPTAAFHLL 9 68 499.2933122598975 996.572071586595 2 499.2932311892509 MULTI CID FTMS 0 0 0 4903 334413.875 0.1573506131078821 4 -0.0215644836425781 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 4 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3536437564991 667.3536437564991 24.006375246153908 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 30 + 1 2.666 51634.9 1.0 1080 3822 4903 HBL1_DMSO_200M_050219_2,4904 HBL1_DMSO_200M_050219_2,4904,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4907 24.488 253.0 260890.0 25 0 80583.0 + 45566 YVDPSNPNA 9 77 488.7222668933329 975.4299808534658 2 488.7221557497978 MULTI CID FTMS 0 0 0 4906 153858.59375 0.8415501043631693 -2 0.0102996826171875 1 Unmodified _YVDPSNPNA_ ENSG00000181555|ENST00000409792|SETD2 26.88365393820708 0.1891292719743517 4 [YV]D 3 6 22.932 0.0 0.0 2.3509 0.0 0.0 0.0 595.2497189728596 595.2497189728596 3.234002963358406 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [YV]D 2.3509 + + 101 1 2.666 55846.1 1.0 1081 3824 4906 HBL1_DMSO_200M_050219_2,4907 HBL1_DMSO_200M_050219_2,4907,YVDPSNPNA False True YVDPSNPNA 24.487598 488.722155749798 951084.8125 4906.0 ENSG00000181555|ENST00000409792|SETD2 6.180542469024658 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4910 24.508 800.0 169180.0 25 0 44162.0 + -1 HERMPTVP 8 120 491.7408118973717 981.4670708615434 2 491.7403747439384 MULTI CID FTMS 0 0 0 4909 67395.4375 0.7229234593029273 1 -0.03021240234375 1 Oxidation (M) _HERM(Oxidation (M))PTVP_ REV__ENSG00000134716|ENST00000371204|CYP2J2;REV__ENST00000466095.5_1_1:60366713-60392418:-|nuORF;REV__ENST00000469406.5_1_1:60370173-60392418:-|nuORF 13.50788311687929 0.7113601687236069 4 {[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}{M(Oxidation (M))|F}HS 7 -1 26.712 0.0 0.0 2.7216 0.0 0.0 0.0 80.0148180597289 80.0148180597289 7.889144220455787 0.0 0.0 0.0 0 0.5 2.0 0.2742275032520141 0.0 {[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}{M(Oxidation (M))|F}HS 2.7216 - 358 + 1 2.666 109886.7 0.5099999904632568 1082 3826 4909 HBL1_DMSO_200M_050219_2,4910 HBL1_DMSO_200M_050219_2,4910,HERMPTVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4911 24.522 800.0 107880.0 25 0 7850.6 + 13056 HAWDHAKSV 9 106 525.7594301126177 1049.5043072920353 2 525.7593261599541 MULTI CID FTMS 0 0 0 4909 83770.1015625 0.6278094170361578 -3 0.0152835845947265 2 Unmodified _HAWDHAKSV_ ENSG00000048162|ENST00000614830|NOP16;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;ENST00000510608.1_1_5:175813700-175815552:-|nuORF;nc|ENSG00000048162|Q9Y3C1-2|NOP16;nc|ENSG00000048162|Q9Y3C1-3|NOP16 51.487983226225225 0.0371074584807926 4 [HA]WDHAKSV 9 0 + 86.947 0.0 0.0 8.2846 8.2846 90.589 0.0 0.0 0.0 12.928833987635642 12.928833987635642 12.928833987635642 8.26606256887672 0 2.409379381312206 1.6989700043360187 0.0 0.0 + + [HA]WDHAKSV;[HA]WDAHKSV;HAWDHAKSV;[HA]WDAKHSV;[HA]WDKAHSV;[HA]K[WD]AHSV;HA{[DA]|[EG]}WHKSV;[HA]W[HS]A[VG]SV;{NN|[MP]|[D{I|L}]|[EV]}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ARSV;[KA]H[WD]AHSV 8.2846;7.497;7.0527;6.5659;6.5659;5.3178;4.7903;4.5201;3.004;2.8397 +;-;+;-;-;-;-;-;-;- + 576 1 2.666 72427.9 0.4900000095367431 1083 3826 4909 HBL1_DMSO_200M_050219_2,4911 HBL1_DMSO_200M_050219_2,4911,HAWDHAKSV True True HAWDHAKSV 24.521806 525.759326159954 4731713.75 4909.0 ENST00000510608.1_1_5:175813700-175815552:-|nuORF;;ENSG00000048162|ENST00000614830|NOP16;;nc|ENSG00000048162|Q9Y3C1-2|NOP16;;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;;nc|ENSG00000048162|Q9Y3C1-3|NOP16 9.460538546244305 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4914 24.542 800.0 204060.0 25 0 33002.0 + 42063 VQVPNAGVSV 10 147 485.27237584855885 968.5301987639176 2 485.2728454470634 MULTI CID FTMS 0 0 0 4913 100834.46875 0.2594986285598294 -7 0.1002655029296875 1 Unmodified _VQVPNAGVSV_ REV__ENSG00000113140|ENST00000231061|SPARC;REV__ENST00000521327.1_1_5:151052612-151066451:-|nuORF 29.081581746732265 0.3152867722954398 4 [PA]EQAKVVQ 9 -1 + 29.141 0.0 0.0 3.0088 3.0088 63.301 0.0 0.0 0.0 0.988555052395089 1.2293832495682049 0.988555052395089 1.1711339909634295 0 -0.0221816409884638 1.154901959985743 0.0 0.2742275032520141 [PA]EQAKVVQ;[EP]AQAKVVQ;{[QV]|[N{I|L}]|[RA]|[KV]}PE[QA]AKV;{[QV]|[N{I|L}]|[RA]|[KV]}VYYAKV;{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]{[QN]|[E{I|L}]|[KN]}PQ;{[QV]|[N{I|L}]|[RA]|[KV]}V{[SA]|[TG]}[Q{I|L}]PQ;{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]{[QN]|[E{I|L}]|[KN]}QP;{[QV]|[N{I|L}]|[RA]|[KV]}PT[QA]VVQ;{[QV]|[N{I|L}]|[RA]|[KV]}V{[SA]|[TG]}[Q{I|L}]QP;{[QV]|[N{I|L}]|[RA]|[KV]}V{[SA]|[TG]}V[NG]PV 3.0088;2.8879;2.4881;2.431;2.3914;2.3332;2.2769;2.2502;2.2188;2.0883 -;-;-;-;-;-;-;-;-;- 1211 1 2.666 127317.2 0.5400000214576721 1084 3828 4913 HBL1_DMSO_200M_050219_2,4914 HBL1_DMSO_200M_050219_2,4914,VQVPNAGVSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4915 24.556 800.0 116380.0 25 0 9053.6 + -1 WGLVALTM 8 123 453.7399758336696 905.4653987341392 2 453.7400695681572 MULTI CID FTMS 0 0 0 4913 110219.34375 0.9579275307418867 -8 0.1294364929199218 2 Oxidation (M) _WGLVALTM(Oxidation (M))_ REV__ENSG00000213937|ENST00000445369|CLDN9 20.871210003555333 0.6025813472596342 4 WT{M(Oxidation (M))|F} 3 -1 33.232 0.0 0.0 3.6701 0.0 0.0 453.2871893608955 0.0 453.2871893608955 0.0 21.63811573052314 0.0 0.0 0 0.805462187404089 0.0 0.3494850021680094 0.0 WT{M(Oxidation (M))|F} 3.6701 - 224 + 1 2.666 76016.4 0.550000011920929 1085 3828 4913 HBL1_DMSO_200M_050219_2,4915 HBL1_DMSO_200M_050219_2,4915,WGLVALTM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4916 24.57 800.0 66890.0 25 0 4244.8 -1 0 49 628.78458217696 2511.10922284144 4 629.0362426638603 MULTI CID FTMS 0 0 0 4913 85239.1640625 0.626382254961949 -7 0.1002655029296875 3 4 DD 2 -1 15.969 0.0 0.0 0.63594 0.0 0.0 744.3357856377594 1533.7009305572626 2278.036716195022 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 DD 0.63594 - 11 + 1 2.666 47969.9 0.4799999892711639 1086 3828 4913 HBL1_DMSO_200M_050219_2,4916 HBL1_DMSO_200M_050219_2,4916, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4919 24.59 800.0 114890.0 25 0 9705.6 -1 0 124 426.4795336593767 1701.889028771107 4 426.4799072146416 MULTI CID FTMS 0 0 0 4918 96972.9140625 1.0 0 0.0 1 4 {I|L}AADNK 6 -1 25.297 0.0 0.0 1.4864 0.0 0.0 1071.5555203565589 0.0 1071.5555203565589 0.0 0.6045796419841665 0.0 0.0 0 0.0 0.0 0.0 0.5356668758921829 {I|L}AADNK 1.4864 - 967 + 1 2.682 73909.6 0.4799999892711639 1087 3830 4918 HBL1_DMSO_200M_050219_2,4919 HBL1_DMSO_200M_050219_2,4919, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4920 24.594 175.0 513550.0 25 0 110570.0 + 30899 RIQSKLYRA 9 95 378.89641198480297 1133.667406554609 3 378.8961974978447 MULTI CID FTMS 0 0 0 4918 143653.359375 0.4211142043112812 -4 0.0822505950927734 2 Unmodified _RIQSKLYRA_ ENSG00000144028|ENST00000323853|SNRNP200;nc|ENSG00000144028|O75643-2|SNRNP200 18.721224879955976 0.3299216912490967 4 [R{I|L}]QSK{I|L}ARY 9 2 [R{I|L}]Q + + 35.75 12.42 3.1266 3.1535 3.1535 46.273 0.0 0.0 0.0 0.0 23.3297294840498 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 [R{I|L}]QSK{I|L}ARY 3.1535 - 69 + 1 2.682 80409.7 1.0 1088 3830 4918 HBL1_DMSO_200M_050219_2,4920 HBL1_DMSO_200M_050219_2,4920,RIQSKLYRA False True RIQSKLYRA 24.59363 378.8972 1910296.25 4918.0 nc|ENSG00000144028|O75643-2|SNRNP200;;ENSG00000144028|ENST00000323853|SNRNP200 4.22236982981364 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4923 24.61 599.0 209740.0 25 0 33345.0 -1 IMIMKNFTSV 10 128 400.5438748371146 1198.6097951115437 3 400.5435058474541 MULTI CID FTMS 0 0 0 4922 60866.75390625 0.348000708066554 -4 0.0716323852539062 1 Oxidation (M) _IM(Oxidation (M))IMKNFTSV_ ENSG00000135048|ENST00000377044|CEMIP2;nc|ENSG00000135048|Q9UHN6-2|CEMIP2 11.517880264261096 0.6542831674726655 4 {I|L}PYNNKQHSV 10 -1 + 56.29 0.0 0.0 4.6963 4.6963 73.198 0.0 0.0 0.0 16.532125137753432 3.477733992063065 3.477733992063065 3.477733992063065 0 0.0941876774005248 0.0 1.298455006504028 0.3494850021680094 {I|L}PYNNKQHSV;{I|L}PYNNKQHVS;{I|L}PYGGNKQHSV;{I|L}PYNGGKQHSV;{I|L}PYNNK[AG]HSV;{I|L}PYNGGKQHVS;{I|L}PYGGNKQHVS;{I|L}PYNNK[AG]HVS;{I|L}{[WT]|[RM]}SNKQHSV;{I|L}PYNNA[KG]HSV 4.6963;4.4061;3.9317;3.9317;3.9317;3.6415;3.6415;3.6415;3.5938;3.3081 -;-;-;-;-;-;-;-;-;- 1323 + 1 2.682 100822.1 1.0 1089 3832 4922 HBL1_DMSO_200M_050219_2,4923 HBL1_DMSO_200M_050219_2,4923,IMIMKNFTSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4924 24.624 800.0 67674.0 25 0 4150.1 + -1 GGGSFRGSYGSS 12 95 559.7473490087136 1117.4801450842272 2 559.7466308474541 MULTI CID FTMS 0 0 0 4922 104196.046875 1.0 0 0.0 2 Carbamidomethyl (C),Oxidation (M) _SITC(Carbamidomethyl (C))FLM(Oxidation (M))GSS_ ENSG00000186395|ENST00000269576|KRT10;P13645 17.11289562659939 0.5604042439455784 4 {M(Oxidation (M))|F}YGSS 5 -1 40.701 0.0 0.0 3.6422 0.0 0.0 558.2576771466812 0.0 558.2576771466812 0.0 11.773174902439578 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {M(Oxidation (M))|F}YGSS 3.6422 - 187 1 2.682 48845.6 0.550000011920929 1090 3832 4922 HBL1_DMSO_200M_050219_2,4924 HBL1_DMSO_200M_050219_2,4924,SITCFLMGSS False False GGGSFRGSYGSS 24.624324 559.746630847454 548946.8125 4922.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 1.431262324253718 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4925 24.638 800.0 102740.0 25 0 8217.1 -1 0 89 568.3035964891643 1701.8889600676928 3 568.3038818240166 MULTI CID FTMS 0 0 0 4922 102817.484375 1.0 0 0.0 3 4 {I|L}AKAD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}A{[DA]|[EG]}NK 16 -1 + 115.16 0.0 0.0 6.7668 6.7668 90.442 0.0 0.0 0.0 98.96568891782212 13.441742930704493 13.441742930704493 11.70941280735775 0 1.9674165578762484 1.3979400086720375 0.4247425010840047 0.6109243748081782 {I|L}AKAD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}A{[DA]|[EG]}NK;{I|L}AKW{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}A{[DA]|[EG]}NK;{I|L}AQW{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}A{[DA]|[EG]}NK;{I|L}AKAD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}HHPQ;{I|L}AKW{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}HHPQ;{I|L}AQW{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}HHPQ;[{I|L}A][W{M(Oxidation (M))|F}]{I|L}KD[TP]WNRR;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[DA]|[EG]}A{I|L}KD[TP]WNRR;{[QD]|[EN]|[WG]|[KD]|[RS]}HH{I|L}KD[TP]WNRR 6.7668;6.0788;6.0788;5.599;4.9121;4.9121;2.5847;2.1417;1.6606 -;-;-;-;-;-;-;-;- 572 + 1 2.682 65360.7 0.5299999713897705 1091 3832 4922 HBL1_DMSO_200M_050219_2,4925 HBL1_DMSO_200M_050219_2,4925, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4926 24.652 800.0 133500.0 25 0 17084.0 + 13674 HPYYGKTGV 9 120 511.25869188472217 1020.5028308362444 2 511.2585937380791 MULTI CID FTMS 0 0 0 4922 84974.6875 0.7734392938443697 -5 0.0756473541259765 4 Unmodified _HPYYGKTGV_ ENSG00000151233|ENST00000398675|GXYLT1;nc|ENSG00000151233|Q4G148-2|GXYLT1 24.99096001346401 0.2132109383330889 4 HPYY[KG]TGV 9 0 + 39.405 0.0 0.0 3.8614 3.8614 65.375 0.0 0.0 0.0 16.478174818886373 0.9987091999308716 0.9987091999308716 0.9987091999308716 0 1.1050541008457977 0.0 0.3494850021680094 0.0 + + HPYY[KG]TGV;HPY{I|L}Y{I|L}{[ES]|[DT]|[{I|L}C]};HPYY{I|L}{I|L}{[ES]|[DT]|[{I|L}C]};HPYY[KG][VS]A;HP{I|L}{I|L}C(Carbamidomethyl (C))[EP]GV;HPY[RK]{[{M(Oxidation (M))|F}C]|[YS]}A;{[SA]|[TG]}[PA][PS]{I|L}Y{[ES]|[DT]|[{I|L}C]};HRN[HQ][KC]V;HP{I|L}[HS][KS]{[ES]|[DT]|[{I|L}C]};HRNAHG[KC]V 3.8614;3.7635;3.4948;2.3224;2.2177;1.905;1.6419;1.2417;1.2205;1.0932 +;-;-;-;-;-;-;-;-;- + 631 + 1 2.682 86490.8 0.5099999904632568 1092 3832 4922 HBL1_DMSO_200M_050219_2,4926 HBL1_DMSO_200M_050219_2,4926,HPYYGKTGV False True HPYYGKTGV 24.651987 511.258593738079 720298.3125 4922.0 nc|ENSG00000151233|Q4G148-2|GXYLT1;;ENSG00000151233|ENST00000398675|GXYLT1 5.122258345286052 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4928 24.661 250.0 311250.0 25 0 47942.0 28135 PPPPHPPPP 9 85 466.7530695752682 931.4915862173364 2 466.7531616091728 MULTI CID FTMS 0 0 0 4927 218541.390625 0.6253724629794981 6 -0.1018733978271484 1 Unmodified _PPPPHPPPP_ ENSG00000175879|ENST00000313173|HOXD8;nc|ENSG00000175879|P13378-2|HOXD8;REV__ENSG00000175879|ENST00000313173|HOXD8;REV__nc|ENSG00000175879|P13378-2|HOXD8 56.04830969593885 0.0282699710924866 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPPPP 9 2 + 49.575 0.0 0.0 5.3221 5.3221 73.9 0.0 0.0 0.0 2.5578094971178444 8.824995917031941 2.5578094971178444 2.5578094971178444 0 1.5924778212679485 0.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPPPPP;{[HG]|PP}HPPPPPP;[YK]HPPPPP;{[HG]|PP}PHPPPPP;[YK]PHPPPP;{[HG]|PP}PPHPPPP;{[NV]|[RG]}{[QS]|[NT]}PPPPP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]PPPP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YK]PPP;{[HG]|PP}H[YK]PPP 5.3221;5.0475;4.7602;4.6203;4.1139;3.974;3.6809;2.8513;2.4809;2.2063 -;-;-;-;-;+;-;-;-;- + 136 1 2.689 63393.5 1.0 1093 3833 4927 HBL1_DMSO_200M_050219_2,4928 HBL1_DMSO_200M_050219_2,4928,PPPPHPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4929 24.663 110.0 560540.0 25 0 45075.0 35459 STLKGAGA 8 95 352.70073264753654 703.3869123618731 2 352.7003661990166 MULTI CID FTMS 0 0 0 4927 491031.96875 0.3843225537940722 -13 0.2555885314941406 2 Unmodified _STLKGAGA_ ENST00000335154.9_1_12:50036614-50037331:-|nuORF 30.22481116460888 0.4082965392918993 4 ST{I|L}VWV 6 5 + 56.306 0.0 0.0 8.0049 8.0049 83.853 0.0 0.0 0.0 39.31595480458488 4.970324243813195 4.970324243813195 3.0102999566398125 0 0.3807196863200844 1.6989700043360187 0.3807196863200844 0.0 ST{I|L}VWV;STV{I|L}WV;STV[KQ]AA;[{I|L}T]R{NN|[MP]|[D{I|L}]|[EV]}S;[R{I|L}]D[{I|L}T]S;[R{I|L}]T{NN|[MP]|[D{I|L}]|[EV]}S;[R{I|L}]E{[TV]|[{I|L}S]}S;{NN|[MP]|[D{I|L}]|[EV]}R[{I|L}T]S 8.0049;7.577;4.349;2.0687;1.2941;1.0975;1.0975;0.26788 -;-;-;-;-;-;-;- 147 + 1 2.689 55679.4 1.0 1094 3833 4927 HBL1_DMSO_200M_050219_2,4929 HBL1_DMSO_200M_050219_2,4929,STLKGAGA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4930 24.668 288.0 255700.0 25 0 48746.0 + 4094 DANSQSVKV 9 92 474.243213211059 946.471873488918 2 474.2433044314384 MULTI CID FTMS 0 0 0 4927 169392.15625 0.4498303639099312 -12 0.2264175415039062 3 Unmodified _DANSQSVKV_ ENSG00000164953|ENST00000453321|TMEM67;ENST00000474944.5_1_8:94767142-94822123:+|nuORF 70.33199760932243 0.0209706178985989 4 {[DA]|[EG]}NSQSVKV 9 0 + 84.848 0.0 0.0 8.9647 8.9647 93.272 0.0 0.0 0.0 68.91827190205532 11.706962271689749 11.706962271689749 9.208187539523747 0 1.174742501084005 2.0 0.3494850021680094 1.055462187404089 + + {[DA]|[EG]}NSQSVKV;{[DA]|[EG]}GGSQSVKV;{[DA]|[EG]}NS[AG]SVKV;{[DA]|[EG]}GGS[AG]SVKV;{[DA]|[EG]}{[WT]|[RM]}EVKV;{[DA]|[EG]}{[MS]|[{M(Oxidation (M))|F}A]}S[Q{I|L}]PV;{[DA]|[EG]}{[MS]|[{M(Oxidation (M))|F}A]}S[Q{I|L}]VP;{[DA]|[EG]}{[MS]|[{M(Oxidation (M))|F}A]}S[{I|L}V]QP;[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RN]{[QG]|[NA]};{[SA]|[TG]}GRC[R{I|L}]{[QG]|[NA]} 8.9647;7.9918;7.9918;7.0235;6.1502;2.5139;1.841;1.6723;0.55248;0.46777 +;-;-;-;-;-;-;-;-;- + 260 + 1 2.689 61335.8 1.0 1095 3833 4927 HBL1_DMSO_200M_050219_2,4930 HBL1_DMSO_200M_050219_2,4930,DANSQSVKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4932 24.684 800.0 90976.0 25 0 10706.0 -1 VYVCVCVLS 9 113 549.7691752376667 1097.5237975421333 2 549.7696411013603 MULTI CID FTMS 0 0 0 4931 135492.109375 0.2723259859029178 9 -0.1018390655517578 1 2 Carbamidomethyl (C) _VYVC(Carbamidomethyl (C))VC(Carbamidomethyl (C))VLS_ ENST00000409535.6_1_3:51699723-51699894:+|nuORF 24.67388899826682 0.2172451872415813 4 [YV]{[QS]|[NT]}{[SA]|[TG]}VAHH 10 -1 + 28.35 0.0 0.0 2.5831 2.5831 72.854 0.0 0.0 0.0 8.846886630380695 5.764837301042718 5.764837301042718 8.846886630380695 0 0.0 1.0969100130080565 0.9247425010840048 0.5 [YV]{[QS]|[NT]}{[SA]|[TG]}VAHH;{[QS]|[NT]}VY{[SA]|[TG]}VAHH;[YV]{[QS]|[NT]}V{[SA]|[TG]}AHH;[YV]TNV[QT]HH;[VS]QY{[SA]|[TG]}VAHH;{[QS]|[NT]}SA[YV]VAHH;[YV]V{[QS]|[NT]}{[SA]|[TG]}AHH;[YV]V{[QS]|[NT]}[QT]HH;{[QS]|[NT]}VYV{[SA]|[TG]}AHH;[VS]QYV{[SA]|[TG]}AHH 2.5831;1.777;1.7601;1.7292;1.5321;1.5011;1.3046;0.98369;0.95407;0.70911 -;-;-;-;-;-;-;-;-;- 400 1 2.689 56754.7 0.6899999976158142 1096 3834 4931 HBL1_DMSO_200M_050219_2,4932 HBL1_DMSO_200M_050219_2,4932,VYVCVCVLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4934 24.692 287.0 261270.0 25 0 15005.0 + 34151 SLLYDSIVP 9 115 503.7745561281733 1005.5345593231468 2 503.7754089236259 MULTI CID FTMS 0 0 0 4933 149513.765625 0.0118317405709116 22 -0.1762294769287109 1 Unmodified _SLLYDSIVP_ REV__ENSG00000197386|ENST00000355072|HTT 28.486842064014134 0.1687311288560894 4 VT{I|L}DTTQ[KT] 9 -1 + 61.921 0.0 0.0 6.1581 6.1581 86.274 0.0 0.0 0.0 51.208056475053496 3.4337218370150424 3.4337218370150424 9.208187539523747 0 0.4247425010840047 2.0 0.3807196863200844 0.3054621874040891 VT{I|L}DTTQ[KT];VT{I|L}DTT[AG][KT];VT{I|L}DT[YV]PV;VT{I|L}[WM]Q[KT];VT{I|L}[WM][AG][KT];VT{I|L}[HQ][Y{M(Oxidation (M))|F}]V 6.1581;5.2423;4.8774;4.8466;3.9254;3.786 -;-;-;-;-;- 186 + 1 2.689 63593.0 1.0 1097 3835 4933 HBL1_DMSO_200M_050219_2,4934 HBL1_DMSO_200M_050219_2,4934,SLLYDSIVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4935 24.7 410.0 238340.0 25 0 111230.0 -1 0 70 488.2677906444855 487.2605141778855 1 488.2681152224541 MULTI CID FTMS 0 0 0 4933 222905.140625 0.990352450183448 4 -0.0693740844726562 2 4 D 1 -1 10.837 0.0 0.0 2.2242 0.0 0.0 354.2230823925324 0.0 354.2230823925324 0.0 5.040558529907786 0.0 0.0 0 0.0 0.0 0.0 0.0 D 2.2242 - 20 + 1 2.689 83062.8 1.0 1098 3835 4933 HBL1_DMSO_200M_050219_2,4935 HBL1_DMSO_200M_050219_2,4935, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4936 24.713 791.0 192650.0 25 0 13459.0 + 3850 DAKKQFEKV 9 168 364.873311713569 1091.5981057409072 3 364.8727294802666 MULTI CID FTMS 0 0 0 4933 103881.5859375 0.6971838097505167 -9 0.1928787231445312 3 Unmodified _DAKKQFEKV_ ENSG00000114331|ENST00000326793|ACAP2;ENST00000480906.5_1_3:195057651-195163594:-|nuORF 37.07464296494664 0.0915153923251136 4 DAKVK[VS]G 8 6 46.386 0.0 0.0 4.2494 0.0 0.0 0.0 304.1171969049438 304.1171969049438 31.69334966143034 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.6203715150305281 0.7302046884880937 DAKVK[VS]G 4.2494 - 637 + 1 2.689 127188.4 1.0 1099 3835 4933 HBL1_DMSO_200M_050219_2,4936 HBL1_DMSO_200M_050219_2,4936,DAKKQFEKV True True DAKKQFEKV 24.71328 364.872729480267 968548.1875 4933.0 ENSG00000114331|ENST00000326793|ACAP2;;ENST00000480906.5_1_3:195057651-195163594:-|nuORF 1.641249656677246 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4937 24.724 643.0 136600.0 25 0 9509.3 + -1 LPENSMRAV 9 114 516.760774245984 1031.5069955587678 2 516.7605468630791 MULTI CID FTMS 0 0 0 4933 83746.3203125 0.9072558435090948 -3 0.0870189666748046 4 Oxidation (M) _LPENSM(Oxidation (M))RAV_ nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-17|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1 16.149105407346934 0.3995459350917656 4 {I|L}PEN{[RE]|[WV]}SA 8 -1 45.368 0.0 0.0 4.3982 0.0 0.0 0.0 132.04566370181877 132.04566370181877 20.753800256993955 0.0 0.0 0.0 0 0.3252574989159953 1.3010299956639813 0.0 0.0 {I|L}PEN{[RE]|[WV]}SA 4.3982 - 372 + 1 2.689 76372.1 1.0 1100 3835 4933 HBL1_DMSO_200M_050219_2,4937 HBL1_DMSO_200M_050219_2,4937,LPENSMRAV False False LPENSMRAV 24.724498 516.760546863079 1157711.5 4933.0 nc|ENSG00000131196|O95644-10|NFATC1;;nc|ENSG00000131196|O95644-5|NFATC1;;ENSG00000131196|ENST00000427363|NFATC1;;nc|ENSG00000131196|O95644-11|NFATC1;;nc|ENSG00000131196|O95644-8|NFATC1;;nc|ENSG00000131196|O95644-2|NFATC1;;nc|ENSG00000131196|O95644-6|NFATC1;;nc|ENSG00000131196|O95644-4|NFATC1;;nc|ENSG00000131196|O95644-17|NFATC1;;nc|ENSG00000131196|O95644-3|NFATC1;;chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1 2.5737980206807456 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4940 24.736 270.0 277430.0 25 0 35682.0 + 17674 KPTGARPSAL 10 79 499.2933122598975 996.572071586595 2 499.2928649783134 MULTI CID FTMS 0 0 0 4939 286402.78125 0.1347601179092528 19 -0.1281719207763672 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 20.41453444215458 0.5050059513928961 4 KPT 3 7 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3527911729832 667.3527911729832 20.65166884247504 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPT 3.9829 + + 63 + 1 2.689 64016.0 1.0 1101 3837 4939 HBL1_DMSO_200M_050219_2,4940 HBL1_DMSO_200M_050219_2,4940,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4941 24.75 800.0 127400.0 25 0 13822.0 + 17714 KPTRQLPA 8 116 455.7768706725125 909.539188411825 2 455.7770568728447 MULTI CID FTMS 0 0 0 4939 110728.2578125 0.9078844777127478 -17 0.3321113586425781 2 Unmodified _KPTRQLPA_ REV__ENSG00000064218|ENST00000190165|DMRT3 15.847184025352805 0.6768015514314958 4 KPT 3 -1 34.253 0.0 0.0 3.7659 0.0 0.0 0.0 580.3216236444022 580.3216236444022 19.832340731861667 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 KPT 3.7659 + + 291 + 1 2.689 83613.5 0.5199999809265137 1102 3837 4939 HBL1_DMSO_200M_050219_2,4941 HBL1_DMSO_200M_050219_2,4941,KPTRQLPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4949 24.787 581.0 183320.0 25 0 20764.0 + 35923 SVPDTVHHV 9 94 495.7539385283173 989.4933241234344 2 495.7538329958916 MULTI CID FTMS 0 0 0 4948 174480.0 0.0580178900132367 -31 0.6144065856933594 1 Unmodified _SVPDTVHHV_ ENSG00000079785|ENST00000233084|DDX1;ENST00000459706.1_1_2:15757448-15761320:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 44.40701690623563 0.0526327925666318 4 [VS]PDTVHVH 9 2 + 64.58 0.0 0.0 6.5266 6.5266 78.532 0.0 0.0 0.0 27.147642715192504 2.430380486862944 2.430380486862944 2.430380486862944 0 0.3807196863200844 2.0 0.7742275032520141 0.0 [VS]PDTVHVH;[VS]PDTVHHV;[VS]VP{[ES]|[DT]|[{I|L}C]}HVH;[VS]VP{[ES]|[DT]|[{I|L}C]}HHV;[VS]PV{[ES]|[DT]|[{I|L}C]}HVH;[VS]PV{[ES]|[DT]|[{I|L}C]}HHV;[VS]V{[ET]|[MV]}H[YR];[VS][{I|L}T]DH[YR];[VS][{I|L}T]HD[YR];[DP]T[HV]HVSV 6.5266;6.281;5.9549;5.7093;5.6248;5.3792;4.1111;3.4278;3.3761;3.2535 -;+;-;-;-;-;-;-;-;- + 525 + 1 2.689 85682.3 1.0 1103 3844 4948 HBL1_DMSO_200M_050219_2,4949 HBL1_DMSO_200M_050219_2,4949,SVPDTVHHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4951 24.796 366.0 248290.0 25 0 25017.0 + + 42072 VQPEAQAKV 9 108 485.27237584855885 968.5301987639176 2 485.2730895876884 MULTI CID FTMS 0 0 0 4950 176067.921875 0.4531127582297267 10 -0.0661468505859375 1 Unmodified _VQVSFYKV_ ENST00000561142.5_1_14:24605441-24607359:+|nuORF;ENST00000561059.5_1_14:24605441-24606295:+|nuORF;nc|ENSG00000092010|Q06323-3|PSME1;ENSG00000092010|ENST00000206451|PSME1;ENST00000559123.5_1_14:24605441-24606207:+|nuORF;nc|ENSG00000092010|Q06323-2|PSME1 28.486842064014134 0.4448922141344407 4 {[QV]|[N{I|L}]|[RA]|[KV]}S 3 -1 33.706 0.0 0.0 3.4802 0.0 0.0 0.0 651.3484110044052 651.3484110044052 14.440723522185555 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}S 3.4802 + + 276 1 2.689 73022.2 1.0 1104 3845 4950 HBL1_DMSO_200M_050219_2,4951 HBL1_DMSO_200M_050219_2,4951,VQVSFYKV False False VQPEAQAKV 24.795627 485.273089587688 4377978.0 4950.0 ENST00000561142.5_1_14:24605441-24607359:+|nuORF;;ENST00000561059.5_1_14:24605441-24606295:+|nuORF;;nc|ENSG00000092010|Q06323-3|PSME1;;ENSG00000092010|ENST00000206451|PSME1;;ENST00000559123.5_1_14:24605441-24606207:+|nuORF;;nc|ENSG00000092010|Q06323-2|PSME1 3.7585159142812095 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4954 24.816 800.0 120930.0 25 0 13890.0 -1 MLLSRSPS 8 118 453.7399758336696 905.4653987341392 2 453.7404662966728 MULTI CID FTMS 0 0 0 4953 108868.2734375 0.9461852411919928 11 -0.0650997161865234 1 Oxidation (M) _M(Oxidation (M))LLSRSPS_ ENSG00000132334|ENST00000254667|PTPRE;nc|ENSG00000132334|P23469-2|PTPRE;nc|ENSG00000132334|P23469-3|PTPRE 13.50788311687929 0.7113601687236069 4 YP 2 -1 37.619 0.0 0.0 4.1547 0.0 0.0 0.0 642.3303316705686 642.3303316705686 8.908103009885764 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 YP 4.1547 - 218 + 1 2.689 79259.9 0.5299999713897705 1105 3847 4953 HBL1_DMSO_200M_050219_2,4954 HBL1_DMSO_200M_050219_2,4954,MLLSRSPS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4956 24.828 469.0 137610.0 25 0 8685.4 -1 0 48 628.78458217696 2511.10922284144 4 629.0363036990166 MULTI CID FTMS 0 0 0 4955 121227.1171875 0.8908406817641378 13 -0.0731239318847656 1 4 DD 2 -1 20.969 0.0 0.0 0.83505 0.0 0.0 744.3286959533267 1533.704981788252 2278.0336777415787 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 DD 0.83505 - 12 + 1 2.694 56077.7 1.0 1106 3848 4955 HBL1_DMSO_200M_050219_2,4956 HBL1_DMSO_200M_050219_2,4956, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 4959 24.837 65.0 1190300.0 25 0 179120.0 + 35925 SVPDTVHHV 9 86 330.8385072230138 989.4936922692414 3 330.8381225466728 MULTI CID FTMS 0 0 0 4958 759398.25 0.1544344121498717 -26 0.3515453338623047 1 Unmodified _SVPDTVHHV_ ENSG00000079785|ENST00000233084|DDX1;ENST00000459706.1_1_2:15757448-15761320:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 28.486842064014134 0.1687311288560894 4 [VS]PDVTHVH 9 3 + 72.713 0.0 0.0 7.3485 7.3485 78.418 0.0 0.0 0.0 48.63794056863288 11.478174818886371 11.478174818886371 0.9640156839957824 0 0.4247425010840047 2.0 0.6861818737241735 0.0 [VS]PDVTHVH;[VS]PVDTHVH;[VS]P{[QG]|[NA]}PS[YR];[VS][HT]P{[QG]|[NA]}P[PA];[VS][{I|L}T]HD[YR];[R{M(Oxidation (M))|F}]HGTHVH;[VS][{I|L}T]DH[YR];[HV]TSP{[QG]|[NA]}P[PA];[VS][{I|L}T]D[YR]H;[HV]QQVDP[PA] 7.3485;7.2511;4.2888;3.3311;3.2494;3.0722;2.463;2.2213;2.1587;2.1413 -;-;-;-;-;-;-;-;-;- 225 + 1 2.694 66605.8 1.0 1107 3850 4958 HBL1_DMSO_200M_050219_2,4959 HBL1_DMSO_200M_050219_2,4959,SVPDTVHHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4969 24.885 800.0 97464.0 25 0 5497.6 + 34724 SPYHSPKV 8 116 457.73991880539575 913.4652846775916 2 457.7401000857353 MULTI CID FTMS 0 0 0 4968 53287.21875 0.3748955823889166 -16 0.0986385345458984 1 Unmodified _SPYHSPKV_ ENSG00000198807|ENST00000361487|PAX9;ENST00000557107.1_1_14:37135665-37140295:+|nuORF 49.55428908609986 0.1413437743149504 4 SPYHSPKV 8 0 + 68.782 0.0 0.0 7.5298 7.5298 86.373 0.0 0.0 0.0 50.82349818682248 12.735097166722165 12.735097166722165 5.440680443502764 0 1.552042263081291 1.6989700043360187 0.0 0.0 + + SPYHSPKV;SPYHSKPV;SPYHSKVP;V[{M(Oxidation (M))|F}T]HSPKV;[VG]{[QC]|[C(Carbamidomethyl (C))A]}PSPKV;V[{M(Oxidation (M))|F}T]HSKPV;[PS]YHSPKV;[VG]{[QC]|[C(Carbamidomethyl (C))A]}P[KP]SV;[PS]YH[KP]SV;V[{M(Oxidation (M))|F}T]HSKVP 7.5298;6.9342;5.9106;4.7576;4.1925;4.1619;4.0496;3.3526;3.2097;3.1384 +;-;-;-;-;-;+;-;-;- + 245 + 1 2.694 66987.7 0.5 1108 3859 4968 HBL1_DMSO_200M_050219_2,4969 HBL1_DMSO_200M_050219_2,4969,SPYHSPKV False True SPYHSPKV 24.884947 457.740100085735 1994373.625 4968.0 ENST00000557107.1_1_14:37135665-37140295:+|nuORF;;ENSG00000198807|ENST00000361487|PAX9 6.510643482208252 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4973 24.909 800.0 102590.0 25 0 9622.8 + -1 KPCLLLDPL 9 97 534.8116765331141 1067.608800133028 2 534.8121826052666 MULTI CID FTMS 0 0 0 4972 106227.453125 0.1213927193048177 -18 0.119171142578125 1 Carbamidomethyl (C) _KPC(Carbamidomethyl (C))LLLDPL_ REV__ENST00000478182.5_1_3:119246651-119248702:-|nuORF 16.942295170755138 0.3780752226737986 4 KPTGAAR 7 -1 58.237 0.0 0.0 5.4549 0.0 0.0 0.0 383.1930025690063 383.1930025690063 25.46288091920455 0.0 0.0 0.0 0 1.305462187404089 0.0 0.4247425010840047 0.0 KPTGAAR 5.4549 - 221 + 1 2.694 67404.3 0.5 1109 3862 4972 HBL1_DMSO_200M_050219_2,4973 HBL1_DMSO_200M_050219_2,4973,KPCLLLDPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4976 24.918 72.0 754860.0 25 0 66878.0 35460 STLKGAGA 8 73 352.70073264753654 703.3869123618731 2 352.7003356814384 MULTI CID FTMS 0 0 0 4975 1046713.8125 0.8192454893223889 18 -0.2994098663330078 1 Unmodified _STLKGAGA_ ENST00000335154.9_1_12:50036614-50037331:-|nuORF 23.1484247019978 0.5573009939494978 4 ST{I|L}VWV 6 5 + 56.661 0.0 0.0 8.0554 8.0554 83.561 0.0 0.0 0.0 41.17599686953518 5.686362358410122 5.686362358410122 3.010299956639805 0 0.3807196863200844 2.0 0.0 0.0 ST{I|L}VWV;STV{I|L}WV;STV[KQ]AA 8.0554;7.6274;4.2357 -;-;- 89 + 1 2.694 49865.6 1.0 1110 3864 4975 HBL1_DMSO_200M_050219_2,4976 HBL1_DMSO_200M_050219_2,4976,STLKGAGA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 4977 24.926 439.0 192400.0 25 0 26739.0 + 4095 DANSQSVKV 9 113 474.243213211059 946.471873488918 2 474.2427856326103 MULTI CID FTMS 0 0 0 4975 195939.578125 0.5203285304559498 19 -0.3113307952880859 2 Unmodified _DANSQSVKV_ ENSG00000164953|ENST00000453321|TMEM67;ENST00000474944.5_1_8:94767142-94822123:+|nuORF 70.33199760932243 0.0209706178985989 4 {[DA]|[EG]}NSQSVKV 9 0 + 82.277 0.0 0.0 8.6931 8.6931 87.448 0.0 0.0 0.0 22.922152515121223 4.559319556497243 4.559319556497243 4.559319556497243 0 1.174742501084005 2.0 0.0 1.0387254899964358 + + {[DA]|[EG]}NSQSVKV;{[DA]|[EG]}NSQSVVK;{[DA]|[EG]}GGSQSVKV;{[DA]|[EG]}NS[AG]SVKV;{[DA]|[EG]}GGSQSVVK;{[DA]|[EG]}NS[AG]SVVK;{[DA]|[EG]}GGS[AG]SVKV;{[DA]|[EG]}{[WT]|[RM]}EVKV;{[DA]|[EG]}GGS[AG]SVVK;{[DA]|[EG]}{[WT]|[RM]}EVVK 8.6931;8.2113;7.7202;7.7202;7.2384;7.2384;6.7519;6.5659;6.2702;6.0842 +;-;-;-;-;-;-;-;-;- + 366 + 1 2.694 68690.2 1.0 1111 3864 4975 HBL1_DMSO_200M_050219_2,4977 HBL1_DMSO_200M_050219_2,4977,DANSQSVKV True True DANSQSVKV 24.925968 474.24278563261 4748913.0 4975.0 ENST00000474944.5_1_8:94767142-94822123:+|nuORF;;ENSG00000164953|ENST00000453321|TMEM67 8.0779660542806 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4978 24.929 153.0 909560.0 25 0 180810.0 28390 PSPGPGGHV 9 108 402.70377811237086 803.3930032915417 2 402.7033264040947 MULTI CID FTMS 0 0 0 4975 327729.5 0.3948896992181613 -11 0.0686454772949218 3 Unmodified _PSPGPGGHV_ nc|ENSG00000181856|P14672-2|SLC2A4 15.847184025352805 0.4077185912009129 4 PDTVHVH 7 7 + 71.139 0.0 0.0 8.8548 8.8548 82.931 0.0 0.0 0.0 9.262386055032591 1.7731749024395782 1.7731749024395782 1.7731749024395782 0 1.3494850021680094 1.6989700043360187 0.0 0.0 PDTVHVH;PDTVHHV;[DP]TVHHV;PDTVVHH;[HV]TDPHV;VP{[ES]|[DT]|[{I|L}C]}HVH;VP{[ES]|[DT]|[{I|L}C]}HHV;[PS]EVHHV;[HV]TDHPV;VP[HS]EVH 8.8548;8.6341;7.7019;6.9362;6.4661;5.6946;5.4739;5.2631;4.8696;4.5068 -;-;-;-;-;-;-;-;-;- 596 + 1 2.694 114209.3 1.0 1112 3864 4975 HBL1_DMSO_200M_050219_2,4978 HBL1_DMSO_200M_050219_2,4978,PSPGPGGHV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 4979 24.933 191.0 461300.0 25 0 91701.0 + 32641 SAYRVKTV 8 83 308.51511549250176 922.5235170777052 3 308.5149719119072 MULTI CID FTMS 0 0 0 4975 234552.90625 0.374558119615382 -11 0.0686454772949218 4 Unmodified _SAYRVKTV_ ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35455862-35480681:-|nuORF;nc|ENSG00000163867|O95789-1|ZMYM6 18.13498045792455 0.6430038125133779 4 {[SA]|[TG]}V 3 5 31.567 0.0 0.0 3.4218 0.0 0.0 0.0 662.3640384888694 662.3640384888694 12.811121573686748 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[SA]|[TG]}V 3.4218 - 46 + 1 2.694 77880.2 1.0 1113 3864 4975 HBL1_DMSO_200M_050219_2,4979 HBL1_DMSO_200M_050219_2,4979,SAYRVKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4980 24.946 800.0 185290.0 25 0 18230.0 + -1 WMKMIDGLPQF 11 138 466.5567134597256 1396.648310979377 3 466.5566589236259 MULTI CID FTMS 0 0 0 4975 91536.359375 0.9653143901919776 -3 0.0244197845458984 5 2 Oxidation (M) _WM(Oxidation (M))KM(Oxidation (M))IDGLPQF_ REV__ENSG00000204120|ENST00000373563|GIGYF2;REV__nc|ENSG00000204120|Q6Y7W6-3|GIGYF2;REV__nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;REV__nc|ENSG00000204120|Q6Y7W6-5|GIGYF2 4.406150317652783 0.8543594311449257 4 NQQD[DN]A{M(Oxidation (M))|F} 8 -1 22.744 0.0 0.0 1.6285 0.0 0.0 446.2626431100394 0.0 446.2626431100394 0.0 0.1810218173124589 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.9559771852360796 NQQD[DN]A{M(Oxidation (M))|F} 1.6285 - 488 + 1 2.694 114386.9 0.4900000095367431 1114 3864 4975 HBL1_DMSO_200M_050219_2,4980 HBL1_DMSO_200M_050219_2,4980,WMKMIDGLPQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4984 24.971 800.0 155810.0 25 0 12800.0 + 17908 KQTEIAKRL 9 139 362.89276146943735 1085.656455008512 3 362.8921691775322 MULTI CID FTMS 0 0 0 4983 85580.484375 0.5885591004718014 -6 0.065338134765625 1 Unmodified _KQTEIAKRL_ ENSG00000140332|ENST00000451782|TLE3;ENSG00000196781|ENST00000376499|TLE1;nc|ENSG00000140332|Q04726-2|TLE3;nc|ENSG00000140332|Q04726-3|TLE3;nc|ENSG00000140332|Q04726-4|TLE3;nc|ENSG00000140332|Q04726-6|TLE3;nc|ENSG00000140332|Q04726-7|TLE3;nc|ENSG00000140332|Q04726|TLE3 40.23920728925047 0.0741434193262949 4 KQTE{I|L}AK{I|L}R 9 2 + 66.434 0.0 0.0 6.1193 6.1193 80.494 0.0 0.0 0.0 14.09256854528806 4.416489365574428 4.416489365574428 4.416489365574428 0 0.9916440611282626 0.0 0.0 0.5 KQTE{I|L}AK{I|L}R;KQTE{I|L}AKR{I|L};K[AG]TE{I|L}AK{I|L}R;K[AG]TE{I|L}AKR{I|L};KQTE{I|L}{I|L}[KA]R;K[AG]TE{I|L}{I|L}[KA]R;KVVC(Carbamidomethyl (C))RR{I|L}R;KVVC(Carbamidomethyl (C))RRR{I|L} 6.1193;5.7125;5.2711;4.8643;4.3305;3.4823;2.1048;1.698 -;+;-;-;-;-;-;- + 253 + 1 2.694 101194.8 0.4900000095367431 1115 3867 4983 HBL1_DMSO_200M_050219_2,4984 HBL1_DMSO_200M_050219_2,4984,KQTEIAKRL True True KQTEIAKRL 24.970657 362.892169177532 882455.1875 4983.0 ENSG00000196781|ENST00000376499|TLE1;;nc|ENSG00000140332|Q04726-7|TLE3;;nc|ENSG00000140332|Q04726-6|TLE3;;nc|ENSG00000140332|Q04726-2|TLE3;;nc|ENSG00000140332|Q04726-4|TLE3;;nc|ENSG00000140332|Q04726-3|TLE3;;nc|ENSG00000140332|Q04726|TLE3;;ENSG00000140332|ENST00000451782|TLE3 1.801549971103668 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4987 24.979 105.0 556730.0 25 0 38093.0 + 32643 SAYRVKTV 8 74 462.2690202539985 922.5234875747972 2 462.2690612673759 MULTI CID FTMS 0 0 0 4986 584781.3125 0.7098353590299294 -6 0.0653114318847656 1 Unmodified _SAYRVKTV_ ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35455862-35480681:-|nuORF;nc|ENSG00000163867|O95789-1|ZMYM6 32.78568957990786 0.3549862272178655 4 {[SA]|[TG]}[YR]VKTV 8 0 + 56.604 0.0 0.0 6.1358 6.1358 90.563 0.0 0.0 0.0 22.44727494896693 51.11941264025134 22.44727494896693 28.26606256887672 0 1.1989700043360187 2.0 0.0 0.0 + + {[SA]|[TG]}[YR]VKTV;{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}C]|[YS]}VKTV;{[QV]|[N{I|L}]|[RA]|[KV]}RY{[SA]|[TG]}TV 6.1358;3.0718;2.9992 +;-;- + 81 1 2.694 49478.5 1.0 1116 3869 4986 HBL1_DMSO_200M_050219_2,4987 HBL1_DMSO_200M_050219_2,4987,SAYRVKTV False True SAYRVKTV 24.979468 462.269061267376 8139883.0 4986.0 nc|ENSG00000163867|O95789-1|ZMYM6;;ENSG00000163867|ENST00000357182|ZMYM6;;ENST00000493328.5_1_1:35455862-35480681:-|nuORF 3.517597039540609 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4990 25.0 800.0 215290.0 25 0 26189.0 + 17675 KPTGARPSAL 10 115 499.2932129340502 996.5718729349004 2 499.2931701540947 MULTI CID FTMS 0 0 0 4989 313478.71875 0.1288215149205783 -12 0.1148872375488281 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 37.07464296494664 0.1884581770199685 4 KPTG 4 6 46.542 0.0 0.0 4.6702 0.0 0.0 0.0 610.3317354791624 610.3317354791624 25.11561899423569 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.0 + KPTG 4.6702 + + 173 + 1 2.694 133221.2 0.9100000262260436 1117 3871 4989 HBL1_DMSO_200M_050219_2,4990 HBL1_DMSO_200M_050219_2,4990,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4993 25.02 800.0 70811.0 25 0 13246.0 + 32313 RYIEQATVH 9 70 558.7932399678807 1115.571927002561 2 558.7935668826103 MULTI CID FTMS 0 0 0 4992 63378.66796875 0.6772447334997518 1 -0.0302028656005859 1 Unmodified _RYIEQATVH_ ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000055163|Q96F07|CYFIP2 29.84058131909904 0.1515068451768857 4 EQATVH 6 3 56.815 0.0 0.0 5.0929 0.0 0.0 432.249803611525 0.0 432.249803611525 0.0 45.84630327004689 0.0 0.0 0 1.424742501084005 0.0 0.3807196863200844 0.0 + EQATVH 5.0929 + + 159 1 2.694 49371.2 0.5299999713897705 1118 3873 4992 HBL1_DMSO_200M_050219_2,4993 HBL1_DMSO_200M_050219_2,4993,RYIEQATVH False True RYIEQATVH 25.020132 558.79356688261 633734.9375 4992.0 nc|ENSG00000055163|Q96F07|CYFIP2;;ENSG00000055163|ENST00000620254|CYFIP2;;ENSG00000273749|ENST00000617928|CYFIP1 7.103993097941081 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4994 25.034 800.0 109030.0 25 0 13759.0 + 39193 TYQNNVKQV 9 120 547.2857062740031 1092.5568596148062 2 547.2865478396416 MULTI CID FTMS 0 0 0 4992 88667.078125 0.3363762956819277 -4 0.0290756225585937 2 Unmodified _TYQNNVKQV_ ENSG00000198146|ENST00000356321|ZNF770;ENST00000440243.2_1_X:102342330-102342555:+|nuORF 78.7280429016045 0.0178249292250809 4 [YT]Q{NN|[MP]|[D{I|L}]|[EV]}VKQV 9 0 + 65.388 0.0 0.0 5.9849 5.9849 85.622 0.0 0.0 0.0 37.49811833708067 14.041068762088996 14.041068762088996 9.208187539523747 0 1.610924374808178 2.0 0.3494850021680094 1.4604093769761874 + + [YT]Q{NN|[MP]|[D{I|L}]|[EV]}VKQV;[YT][AG]{NN|[MP]|[D{I|L}]|[EV]}VKQV;[YT]Q{NN|[MP]|[D{I|L}]|[EV]}VK[AG]V;[W{I|L}]V{M(Oxidation (M))|F}{[CA]|SS}KQV;[W{I|L}]V{M(Oxidation (M))|F}{[CA]|SS}K[AG]V;[W{I|L}]V{M(Oxidation (M))|F}T[NS]QV;[AG]NNVKQV[YT];[W{I|L}]V{M(Oxidation (M))|F}TT{[ET]|[MV]}P;{NN|[MP]|[D{I|L}]|[EV]}VQKQV[YT];{[QN]|[E{I|L}]|[KN]}NVKQV[YT] 5.9849;5.1421;4.8222;4.0108;2.8482;2.4699;2.1941;1.9409;1.8999;1.8922 +;-;-;-;-;-;-;-;-;- + 870 + 1 2.694 73944.6 0.5099999904632568 1119 3873 4992 HBL1_DMSO_200M_050219_2,4994 HBL1_DMSO_200M_050219_2,4994,TYQNNVKQV True True TYQNNVKQV 25.033978 547.286547839642 1447485.125 4992.0 ENST00000440243.2_1_X:102342330-102342555:+|nuORF;;ENSG00000198146|ENST00000356321|ZNF770 6.689602057139079 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4996 25.039 22.0 2826000.0 25 0 361950.0 + 35924 SVPDTVHHV 9 75 495.7539385283173 989.4933241234344 2 495.7538940310478 MULTI CID FTMS 0 0 0 4995 2555383.75 0.8497132814598376 -1 0.0302028656005859 1 Unmodified _SVPDTVHHV_ ENSG00000079785|ENST00000233084|DDX1;ENST00000459706.1_1_2:15757448-15761320:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 44.40701690623563 0.0526327925666318 4 [VS]PDTVHHV 9 0 + 67.788 0.0 0.0 6.8508 6.8508 93.283 0.0 0.0 0.0 20.833267986193675 9.085842975353629 9.085842975353629 28.252574989159942 0 0.4247425010840047 2.0 0.75 0.0 + + [VS]PDTVHHV;[DP]TVHHVSV;[VS]PEHHVSV;[VS]P{[QG]|[NA]}SP[YR];[PS]EVHHVSV;[VS][{I|L}T][HD][YR];[R{M(Oxidation (M))|F}]H{[SA]|[TG]}HHV;[R{M(Oxidation (M))|F}]HH{[SA]|[TG]}HV;[PS][H{I|L}]S{[QG]|[NA]}P[PA];HHV{[ES]|[DT]|[{I|L}C]}PVSV 6.8508;3.9956;3.9737;3.7956;2.4565;2.3121;1.5749;1.2707;0.71749;0.4119 +;-;-;-;-;-;-;-;-;- + 272 + 1 2.694 55064.1 1.0 1120 3874 4995 HBL1_DMSO_200M_050219_2,4996 HBL1_DMSO_200M_050219_2,4996,SVPDTVHHV True True SVPDTVHHV 25.038749 495.753894031048 92741556.0 4995.0 ENST00000459706.1_1_2:15757448-15761320:+|nuORF;;nc|ENSG00000079785|Q92499-2|DDX1;;nc|ENSG00000079785|Q92499-3|DDX1;;ENSG00000079785|ENST00000233084|DDX1 10.246231079101562 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 4997 25.053 800.0 134720.0 25 0 15203.0 + 22196 LPQGAGLPGF 10 108 478.76166697188273 955.5087810105656 2 478.7614623904228 MULTI CID FTMS 0 0 0 4995 117817.6875 0.2063466817521159 -12 0.1409854888916015 2 Unmodified _LPQGAGLPGF_ REV__ENSG00000121068|ENST00000240328|TBX2;REV__ENST00000477081.1_1_17:59482609-59483362:+|nuORF 36.04419817259434 0.1993394420055842 4 {I|L}PQVQAP{[CT]|[{M(Oxidation (M))|F}G]} 9 -1 + 58.431 0.0 0.0 6.1152 6.1152 86.116 0.0 0.0 0.0 46.648643603091 4.269856214892371 4.269856214892371 9.208187539523747 0 0.2887254899964357 1.3979400086720375 0.0 0.7742275032520141 {I|L}PQVQAP{[CT]|[{M(Oxidation (M))|F}G]};{I|L}PQV[AG]AP{[CT]|[{M(Oxidation (M))|F}G]};{I|L}P[AG]VQAP{[CT]|[{M(Oxidation (M))|F}G]};{I|L}PQV{[WS]|[C(Carbamidomethyl (C)){I|L}]}QV;{I|L}PQVQ{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{I|L}P[HM][RV]{[CT]|[{M(Oxidation (M))|F}G]};{I|L}P[AG]V{[WS]|[C(Carbamidomethyl (C)){I|L}]}QV;{I|L}PQV{[WS]|[C(Carbamidomethyl (C)){I|L}]}[AG]V;{I|L}P[AG]VQ{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{I|L}PQV[AG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}V 6.1152;5.1515;5.1515;5.0603;4.9774;4.3186;4.091;4.091;4.0081;4.0081 -;-;-;-;-;-;-;-;-;- 314 + 1 2.694 86620.9 0.5199999809265137 1121 3874 4995 HBL1_DMSO_200M_050219_2,4997 HBL1_DMSO_200M_050219_2,4997,LPQGAGLPGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 4998 25.067 800.0 229640.0 25 0 7751.3 + 3836 DAITPKREV 9 222 343.52967032224046 1027.5671815669214 3 343.5295287966728 MULTI CID FTMS 0 0 0 4995 83717.3515625 0.7533192012152291 -6 0.0633010864257812 3 Unmodified _DAITPKREV_ ENSG00000143748|ENST00000281701|NVL;nc|ENSG00000143748|O15381-2|NVL;nc|ENSG00000143748|O15381-3|NVL;nc|ENSG00000143748|O15381-4|NVL;nc|ENSG00000143748|O15381-5|NVL 20.580933911654288 0.2795815587326093 4 [W{I|L}]TPK 5 5 22.703 0.0 0.0 2.2094 0.0 0.0 0.0 399.2000216119751 399.2000216119751 8.175532137240607 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 [W{I|L}]TPK 2.2094 - 379 + 1 2.694 146462.0 0.3600000143051147 1122 3874 4995 HBL1_DMSO_200M_050219_2,4998 HBL1_DMSO_200M_050219_2,4998,DAITPKREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5001 25.079 317.0 294190.0 25 0 30982.0 + 16472 KAISGVHTV 9 124 456.2689001490681 910.5232473649362 2 456.2687866091728 MULTI CID FTMS 0 0 0 5000 243709.109375 0.0709360477727837 -9 0.1164131164550781 1 Unmodified _KAISGVHTV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 85.64151623876279 0.0161498729896241 4 RRSRHTV 7 5 + 46.39 0.0 0.0 5.0948 5.0948 68.66 0.0 0.0 0.0 19.94438032420159 7.690036056188532 7.690036056188532 0.3337852590059498 0 1.7614393726401687 0.0 1.4916440611282626 0.0 RRSRHTV;KA{I|L}S[VG]HTV;{[TV]|[{I|L}S]}HGVAKTV;[HT]VGVAKTV;{[TV]|[{I|L}S]}HGVATKV;[KA]{I|L}[HD]KTV;{[TV]|[{I|L}S]}HGVS{I|L}AK;{[TV]|[{I|L}S]}HGVTAKV;{[TV]|[{I|L}S]}HGVTVAK;[HT]VGVATKV 5.0948;5.0582;4.804;4.1535;3.4002;3.266;3.2154;3.2068;2.8848;2.7498 -;+;-;-;-;-;-;-;-;- + 898 + 1 2.686 73647.4 1.0 1123 3876 5000 HBL1_DMSO_200M_050219_2,5001 HBL1_DMSO_200M_050219_2,5001,KAISGVHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5002 25.093 800.0 94020.0 25 0 4358.0 + -1 NAVQMRYMLA 10 95 614.7943016710711 1227.5740504089422 2 614.7939330935478 MULTI CID FTMS 0 0 0 5000 107011.7421875 0.8650655867669593 1 -0.0220203399658203 2 2 Oxidation (M) _NAVQM(Oxidation (M))RYM(Oxidation (M))LA_ REV__ENSG00000197912|ENST00000645818|SPG7;REV__ENST00000564047.1_1_16:89590622-89596095:+|nuORF;REV__nc|ENSG00000197912|Q9UQ90-2|SPG7 19.256988751693697 0.5244284437930726 4 [QA]GGVA{I|L}[C(Carbamidomethyl (C))D]H 10 -1 51.783 0.0 0.0 4.2183 0.0 0.0 0.0 216.13448456922973 216.13448456922973 23.543871694272653 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.8252574989159953 1.4427716485013278 [QA]GGVA{I|L}[C(Carbamidomethyl (C))D]H 4.2183 - 2003 1 2.686 63117.4 0.5899999737739563 1124 3876 5000 HBL1_DMSO_200M_050219_2,5002 HBL1_DMSO_200M_050219_2,5002,NAVQMRYMLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5004 25.098 12.0 5472600.0 25 0 1081700.0 + 35926 SVPDTVHHV 9 79 330.8385072230138 989.4936922692414 3 330.8382140994072 MULTI CID FTMS 0 0 0 5003 4442013.5 0.9033464899797886 1 -0.0316982269287109 1 Unmodified _SVPDTVHHV_ ENSG00000079785|ENST00000233084|DDX1;ENST00000459706.1_1_2:15757448-15761320:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 23.1484247019978 0.2366544122328345 4 [HV]TDP 5 7 23.328 0.0 0.0 2.3575 0.0 0.0 0.0 437.2169338066039 437.2169338066039 1.895971762473252 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3494850021680094 0.0 [HV]TDP 2.3575 - 274 1 2.686 57786.2 1.0 1125 3877 5003 HBL1_DMSO_200M_050219_2,5004 HBL1_DMSO_200M_050219_2,5004,SVPDTVHHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5005 25.108 608.0 151130.0 25 0 14101.0 + 3837 DAITPKREV 9 100 514.7904820474961 1027.566411161792 2 514.7905761599541 MULTI CID FTMS 0 0 0 5003 123519.3359375 0.7523624947762105 -2 0.0260982513427734 2 Unmodified _DAITPKREV_ ENSG00000143748|ENST00000281701|NVL;nc|ENSG00000143748|O15381-2|NVL;nc|ENSG00000143748|O15381-3|NVL;nc|ENSG00000143748|O15381-4|NVL;nc|ENSG00000143748|O15381-5|NVL 32.037481411007896 0.1235546156350648 4 {[DA]|[EG]}{I|L}TN 5 5 54.838 0.0 0.0 5.3367 0.0 0.0 0.0 510.3025311171234 510.3025311171234 22.391646584471843 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.2887254899964357 0.0 {[DA]|[EG]}{I|L}TN 5.3367 - 450 1 2.686 74784.9 1.0 1126 3877 5003 HBL1_DMSO_200M_050219_2,5005 HBL1_DMSO_200M_050219_2,5005,DAITPKREV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5006 25.111 117.0 794160.0 25 0 118490.0 + 1102 AGPFPLTPRL 10 97 356.8771359648649 1067.6095784947947 3 356.8766357302666 MULTI CID FTMS 0 0 0 5003 457810.59375 0.7786458903589737 -3 0.0587730407714843 3 Unmodified _AGPFPLTPRL_ REV__ENST00000532780.5_1_11:122930757-122933127:-|nuORF 19.256988751693697 0.5244284437930726 4 HTPR{I|L} 5 -1 46.058 0.0 0.0 4.3141 0.0 0.0 445.25547988105626 0.0 445.25547988105626 0.0 29.141434418070343 0.0 0.0 0 0.3807196863200844 0.0 0.7302046884880937 0.0 HTPR{I|L} 4.3141 - 249 1 2.686 80255.0 1.0 1127 3877 5003 HBL1_DMSO_200M_050219_2,5006 HBL1_DMSO_200M_050219_2,5006,AGPFPLTPRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5007 25.124 800.0 140400.0 25 0 14771.0 + 39442 VANTMRTSL 9 120 504.7609549922325 1007.5073570512652 2 504.7609435915947 MULTI CID FTMS 0 0 0 5003 83912.140625 0.3195634557891491 -10 0.1384334564208984 4 Oxidation (M) _VANTM(Oxidation (M))RTSL_ ENSG00000150753|ENST00000280326|CCT5;ENST00000508451.1_1_5:10250422-10254994:+|nuORF;ENST00000510326.5_1_5:10250452-10254343:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5 69.10491478415734 0.0214449631113747 4 VANTH 5 5 74.667 0.0 0.0 7.4111 0.0 0.0 0.0 482.2225542541414 482.2225542541414 36.70310309343897 0.0 0.0 0.0 0 0.805462187404089 2.0 0.6747425010840047 0.8807196863200843 VANTH 7.4111 - 328 + 1 2.686 89622.4 0.4600000083446502 1128 3877 5003 HBL1_DMSO_200M_050219_2,5007 HBL1_DMSO_200M_050219_2,5007,VANTMRTSL True False VANTMRTSL 25.124429 504.760943591595 4571053.0 5003.0 ENSG00000150753|ENST00000280326|CCT5;;ENST00000508451.1_1_5:10250422-10254994:+|nuORF;;nc|ENSG00000150753|P48643-2|CCT5;;ENST00000510326.5_1_5:10250452-10254343:+|nuORF 8.275249163309732 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5010 25.145 800.0 193070.0 25 0 17388.0 -1 0 170 362.19405212444144 361.1867756578415 1 362.1965515017509 MULTI CID FTMS 0 0 0 5009 52860.56640625 0.4976371959460031 -2 0.0356693267822265 1 4 {[QN]|[E{I|L}]|[KN]}T 3 -1 + 17.447 0.0 0.0 4.8305 4.8305 76.588 0.0 0.0 0.0 4.694087902940675 7.427359058762011 4.694087902940675 5.739761272819772 0 0.0 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}T;{[ET]|[MV]}{I|L} 4.8305;3.2414 -;- 38 1 2.686 126016.0 0.4600000083446502 1129 3879 5009 HBL1_DMSO_200M_050219_2,5010 HBL1_DMSO_200M_050219_2,5010, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5011 25.154 509.0 183120.0 25 0 8033.1 + -1 MARTPQTV 8 129 452.2392655820517 902.4639782309034 2 452.2404968142509 MULTI CID FTMS 0 0 0 5009 114194.4453125 0.8359438213119769 -2 0.0356693267822265 2 Oxidation (M) _M(Oxidation (M))IPVPMSI_ ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF 28.17323086031832 0.4514957916281387 4 V{M(Oxidation (M))|F} 2 -1 38.583 0.0 0.0 4.2754 0.0 0.0 0.0 653.3196146219316 653.3196146219316 19.51061368551672 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 V{M(Oxidation (M))|F} 4.2754 - 234 + 1 2.686 77130.4 1.0 1130 3879 5009 HBL1_DMSO_200M_050219_2,5011 HBL1_DMSO_200M_050219_2,5011,MIPVPMSI False False MARTPQTV 25.153731 452.240496814251 1137611.75 5009.0 ENSG00000001630|ENST00000003100|CYP51A1;;nc|ENSG00000001630|Q16850-2|CYP51A1;;ENST00000419457.1_1_13:29296686-29297403:-|nuORF 4.212296962738037 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5012 25.161 417.0 270120.0 25 0 25854.0 -1 0 114 485.2531013533277 484.24582488672775 1 485.2588683962822 MULTI CID FTMS 0 0 0 5009 101230.6640625 0.4510459058199169 -14 0.1819381713867187 3 4 SV 2 -1 18.594 0.0 0.0 3.8399 0.0 0.0 280.1344337507887 0.0 280.1344337507887 0.0 15.381068352144714 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 SV 3.8399 - 28 + 1 2.686 89539.1 1.0 1131 3879 5009 HBL1_DMSO_200M_050219_2,5012 HBL1_DMSO_200M_050219_2,5012, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5014 25.166 68.0 890820.0 25 0 95571.0 17699 KPTGVRTNVP 10 66 534.8116765331141 1067.608800133028 2 534.8119384646416 MULTI CID FTMS 0 0 0 5013 875072.6875 1.0 0 0.0 1 Unmodified _KPTGVRTNVP_ ENSG00000165458|ENST00000298229|INPPL1;nc|ENSG00000165458|O15357-2|INPPL1 19.361941925380144 0.5226674314761524 4 KPTGAP 6 5 58.448 0.0 0.0 5.4747 0.0 0.0 0.0 513.2660616510374 513.2660616510374 51.45873464120562 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 KPTGAP 5.4747 - 31 + 1 2.686 55011.5 1.0 1132 3880 5013 HBL1_DMSO_200M_050219_2,5014 HBL1_DMSO_200M_050219_2,5014,KPTGVRTNVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5015 25.174 412.0 293220.0 25 0 89989.0 + 40223 VGRLRRCR 8 94 508.3048221432875 1014.595091353375 2 508.3049499392509 MULTI CID FTMS 0 0 0 5013 148320.953125 0.1806361371188389 -7 0.1573734283447265 2 Unmodified _VGRLRRCR_ REV__ENSG00000260001|ENST00000565886|TGFBR3L;REV__nc|ENSG00000260001|H3BV60|TGFBR3L 13.50788311687929 0.7113601687236069 4 VGQV 4 -1 53.593 0.0 0.0 5.2822 0.0 0.0 0.0 628.3421114557249 628.3421114557249 40.49447076056806 0.0 0.0 0.0 0 0.6694451763165201 1.5228787452803376 0.0 0.4247425010840047 VGQV 5.2822 - 115 + 1 2.686 96482.4 1.0 1133 3880 5013 HBL1_DMSO_200M_050219_2,5015 HBL1_DMSO_200M_050219_2,5015,VGRLRRCR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5016 25.187 800.0 94844.0 25 0 21034.0 -1 0 60 851.3702261609915 1700.7258993887829 2 851.8731567263603 MULTI CID FTMS 0 0 0 5013 88378.984375 0.6100437624111777 -7 0.1573734283447265 3 4 [{I|L}T]PMP 5 -1 18.244 0.0 0.0 1.0727 0.0 0.0 0.0 1158.432905574583 1158.432905574583 14.264771768807591 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 [{I|L}T]PMP 1.0727 - 63 1 2.686 55115.0 0.3899999856948852 1134 3880 5013 HBL1_DMSO_200M_050219_2,5016 HBL1_DMSO_200M_050219_2,5016, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5017 25.201 800.0 100810.0 25 0 6318.3 -1 0 52 575.2903856034687 2871.415545684344 5 575.6921874880791 MULTI CID FTMS 0 0 0 5013 86581.4140625 1.0 0 0.0 4 4 {M(Oxidation (M))|F}NT{[HG]|PP} 5 -1 17.703 0.0 0.0 0.61653 0.0 0.0 2297.132538947819 0.0 2297.132538947819 0.0 14.93882771791494 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}NT{[HG]|PP} 0.61653 - 65 + 1 2.686 67550.3 0.4600000083446502 1135 3880 5013 HBL1_DMSO_200M_050219_2,5017 HBL1_DMSO_200M_050219_2,5017, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5019 25.207 141.0 682310.0 25 0 131380.0 28391 PSPGPGGHV 9 95 402.70377811237086 803.3930032915417 2 402.7036315798759 MULTI CID FTMS 0 0 0 5018 223366.4375 0.2691399624379472 6 -0.1205902099609375 1 Unmodified _PSPGPGGHV_ nc|ENSG00000181856|P14672-2|SLC2A4 21.74664581756881 0.2544899275067181 4 PDTVHVH 7 7 + 64.008 0.0 0.0 7.9673 7.9673 80.757 0.0 0.0 0.0 5.317690958255852 1.451328068725566 1.451328068725566 1.451328068725566 0 1.305462187404089 1.6989700043360187 0.0 0.0 PDTVHVH;PDTVHHV;PDVTHVH;PDVTHHV;[DP]TVHHV;[HV]TDPHV;[HV]TDHPV;[PS]EVHHV;V[DP]THVH;[HV]THDPV 7.9673;7.7866;7.5957;7.4151;7.3054;7.1345;5.3826;4.8794;4.6458;4.5125 -;-;-;-;-;-;-;-;-;- 532 + 1 2.686 80123.6 1.0 1136 3881 5018 HBL1_DMSO_200M_050219_2,5019 HBL1_DMSO_200M_050219_2,5019,PSPGPGGHV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 5020 25.213 343.0 420680.0 25 0 83085.0 + 32642 SAYRVKTV 8 145 308.51511549250176 922.5235170777052 3 308.5150634646416 MULTI CID FTMS 0 0 0 5018 123467.7890625 0.1971660195718365 6 -0.1205902099609375 2 Unmodified _SAYRVKTV_ ENSG00000163867|ENST00000357182|ZMYM6;ENST00000493328.5_1_1:35455862-35480681:-|nuORF;nc|ENSG00000163867|O95789-1|ZMYM6 19.256988751693697 0.6264283240490721 4 SAY 3 5 47.392 0.0 0.0 5.1372 0.0 0.0 0.0 598.3662203424436 598.3662203424436 28.636079919116355 0.0 0.0 0.0 0 0.3579495689832512 2.0 0.0 0.0 + SAY 5.1372 + + 60 + 1 2.686 119977.6 1.0 1137 3881 5018 HBL1_DMSO_200M_050219_2,5020 HBL1_DMSO_200M_050219_2,5020,SAYRVKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5022 25.222 347.0 312450.0 25 0 20703.0 + 24775 MPHPATGKTV 10 116 519.7732522964333 1037.5319516596664 2 519.7737914919853 MULTI CID FTMS 0 0 0 5021 218568.59375 0.4428757780741317 -9 0.2090339660644531 1 Unmodified _MPHPATGKTV_ ENSG00000070814|ENST00000643257|TCOF1;ENST00000515035.5_1_5:149748314-149754605:+|nuORF;nc|ENSG00000070814|Q13428-2|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;nc|ENSG00000070814|Q13428-5|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428|TCOF1 38.17557092003332 0.1768326257063233 4 {NN|[MP]|[D{I|L}]|[EV]}HVS 5 7 46.075 0.0 0.0 4.4408 0.0 0.0 0.0 483.25946985416255 483.25946985416255 4.124379954164596 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 1.0629529932484498 0.0 {NN|[MP]|[D{I|L}]|[EV]}HVS 4.4408 - 399 + 1 2.686 87943.2 1.0 1138 3882 5021 HBL1_DMSO_200M_050219_2,5022 HBL1_DMSO_200M_050219_2,5022,MPHPATGKTV False True MPHPATGKTV 25.221616 519.773791491985 16435330.0 5021.0 nc|ENSG00000070814|Q13428-7|TCOF1;;nc|ENSG00000070814|Q13428-4|TCOF1;;ENST00000515035.5_1_5:149748314-149754605:+|nuORF;;ENSG00000070814|ENST00000643257|TCOF1;;nc|ENSG00000070814|Q13428-2|TCOF1;;nc|ENSG00000070814|Q13428-5|TCOF1;;nc|ENSG00000070814|Q13428|TCOF1;;nc|ENSG00000070814|Q13428-6|TCOF1;;nc|ENSG00000070814|Q13428-8|TCOF1 5.3719719250996905 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5023 25.225 157.0 248370.0 25 0 15562.0 + -1 ATTVHPTY 8 75 466.229464023208 930.444375113216 2 466.2292053103447 MULTI CID FTMS 0 0 0 5021 243559.03125 0.8935978546008219 2 -0.0160026550292968 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ATTVHPTY_ REV__ENST00000437626.5_1_21:46646264-46646372:+|nuORF 5.760428011301431 0.7893668129297577 4 TY 2 -1 24.464 0.0 0.0 2.6293 0.0 0.0 648.3230505055973 0.0 648.3230505055973 0.0 13.661968799114844 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TY 2.6293 + + 35 + 1 2.686 36837.4 1.0 1139 3882 5021 HBL1_DMSO_200M_050219_2,5023 HBL1_DMSO_200M_050219_2,5023,ATTVHPTY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5026 25.234 92.0 754150.0 25 0 107720.0 + 27145 PFPLGTPRL 9 82 333.1980982120499 996.5724652363496 3 333.1975890994072 MULTI CID FTMS 0 0 0 5025 575448.9375 0.9809917056866022 1 -0.0362873077392578 1 Unmodified _PFPLGTPRL_ REV__ENST00000595775.5_1_19:42817488-42818494:+|nuORF 21.74664581756881 0.2544899275067181 4 TPR{I|L} 4 -1 36.331 0.0 0.0 3.6456 0.0 0.0 511.29002577949376 0.0 511.29002577949376 0.0 25.38872836444014 0.0 0.0 0 0.3807196863200844 0.0 0.6861818737241735 0.0 TPR{I|L} 3.6456 + + 285 1 2.689 64680.9 1.0 1140 3884 5025 HBL1_DMSO_200M_050219_2,5026 HBL1_DMSO_200M_050219_2,5026,PFPLGTPRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5027 25.237 151.0 415890.0 25 0 63550.0 + -1 IQRLETMK 8 75 517.7865525030767 0 517.7868530154228 PEAK CID FTMS 0 0 0 5025 382319.46875 1.0 0 0.0 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.3662555986329114 4 KTT 3 -1 33.188 0.0 0.0 3.211 0.0 0.0 63.99710041440091 636.3477884289431 700.344888843344 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.8494850021680094 0.0 KTT 3.211 - 109 + 1 2.689 54776.0 1.0 1141 3884 5025 HBL1_DMSO_200M_050219_2,5027 HBL1_DMSO_200M_050219_2,5027,IQRLETMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5028 25.241 235.0 273210.0 25 0 50600.0 + 34794 SQDPGTHVV 9 83 470.22963329423817 938.4447136552764 2 470.2297851443291 MULTI CID FTMS 0 0 0 5025 188620.296875 0.9954542920718564 1 -0.0362873077392578 3 Unmodified _SQDPGTHVV_ ENSG00000130935|ENST00000253247|NOL11 37.97399986684836 0.0865783450051559 4 {[QS]|[NT]}D 3 6 39.102 0.0 0.0 4.1667 0.0 0.0 0.0 605.3055894699826 605.3055894699826 26.628239132415374 0.0 0.0 0.0 0 1.0 0.9208187539523752 0.2887254899964357 0.805462187404089 + {[QS]|[NT]}D 4.1667 + + 85 1 2.689 58070.1 1.0 1142 3884 5025 HBL1_DMSO_200M_050219_2,5028 HBL1_DMSO_200M_050219_2,5028,SQDPGTHVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5029 25.251 569.0 200450.0 25 0 12592.0 + 4228 DAPKDYRQV 9 140 364.5210301129717 1090.541260939115 3 364.5208007693291 MULTI CID FTMS 0 0 0 5025 171029.40625 1.0 0 0.0 4 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 36.12702656103203 0.0967173616627612 4 {[DA]|[EG]}PKD 5 4 53.966 0.0 0.0 4.9485 0.0 0.0 0.0 561.2795165053653 561.2795165053653 27.935143701554424 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.8494850021680094 + {[DA]|[EG]}PKD 4.9485 + + 89 + 1 2.689 95476.9 1.0 1143 3884 5025 HBL1_DMSO_200M_050219_2,5029 HBL1_DMSO_200M_050219_2,5029,DAPKDYRQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5030 25.256 247.0 144490.0 25 0 11457.0 + 4229 DAPKDYRQV 9 72 546.2766954268186 1090.5388379204371 2 546.2776367068291 MULTI CID FTMS 0 0 0 5025 112823.0625 0.8353915554448489 1 -0.0362873077392578 5 Unmodified _DAPKDYRQV_ ENSG00000162063|ENST00000397066|CCNF 8.745405648335112 0.6093864874670651 4 {[DA]|[EG]}PKD 5 4 34.437 0.0 0.0 3.1578 0.0 0.0 0.0 561.2777454479033 561.2777454479033 24.83288122256525 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}PKD 3.1578 + + 26 + 1 2.689 33869.0 1.0 1144 3884 5025 HBL1_DMSO_200M_050219_2,5030 HBL1_DMSO_200M_050219_2,5030,DAPKDYRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5031 25.265 541.0 199100.0 25 0 26187.0 42249 VSMIFALP 8 113 439.2478937081907 876.4812344831814 2 439.2472717165947 MULTI CID FTMS 0 0 0 5025 98105.5703125 0.99077880380162 1 -0.0362873077392578 6 Unmodified _VSMIFALP_ ENSG00000102239|ENST00000370648|BRS3 10.183394434864962 0.7604730176254005 4 AP 2 6 22.078 0.0 0.0 2.519 0.0 0.0 690.380478723219 0.0 690.380478723219 0.0 11.989700043360187 0.0 0.0 0 0.5 0.0 0.0 0.0 AP 2.519 - 52 + 1 2.689 88958.5 1.0 1145 3884 5025 HBL1_DMSO_200M_050219_2,5031 HBL1_DMSO_200M_050219_2,5031,VSMIFALP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5033 25.27 70.0 543820.0 25 0 82456.0 + 17619 KPTAAFHLL 9 44 499.2932129340502 996.5718729349004 2 499.2932311892509 MULTI CID FTMS 0 0 0 5032 711551.75 0.2924063705022675 2 -0.0567302703857421 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 4 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3507784479124 667.3507784479124 37.47425010840047 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 16 + 1 2.689 32430.4 1.0 1146 3885 5032 HBL1_DMSO_200M_050219_2,5033 HBL1_DMSO_200M_050219_2,5033,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5034 25.284 800.0 162480.0 25 0 7498.2 35461 STLKGAGA 8 206 352.70073264753654 703.3869123618731 2 352.7006408572197 MULTI CID FTMS 0 0 0 5032 50634.97265625 0.0396311508028325 39 -0.8958358764648438 2 Unmodified _STLKGAGA_ ENST00000335154.9_1_12:50036614-50037331:-|nuORF 11.640296217721598 0.738950129755968 4 ST{I|L} 3 5 46.682 0.0 0.0 6.6368 0.0 0.0 0.0 399.1996892710745 399.1996892710745 32.70303756120384 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + ST{I|L} 6.6368 + + 79 + 1 2.689 103049.4 0.4099999964237213 1147 3885 5032 HBL1_DMSO_200M_050219_2,5034 HBL1_DMSO_200M_050219_2,5034,STLKGAGA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5035 25.287 177.0 465060.0 25 0 39816.0 + 21190 LPDATSSHRTV 11 86 395.2070450298864 1182.5993056898592 3 395.2065612673759 MULTI CID FTMS 0 0 0 5032 335806.46875 0.0958571398598808 -27 0.4005031585693359 3 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 26.345799442569017 0.4735952257064628 4 {I|L}PDATSSH 8 3 79.813 0.0 0.0 6.749 0.0 0.0 0.0 371.2048128717407 371.2048128717407 52.36616609591756 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.2302046884880935 0.0 + {I|L}PDATSSH 6.749 + + 135 + 1 2.689 74005.8 1.0 1148 3885 5032 HBL1_DMSO_200M_050219_2,5035 HBL1_DMSO_200M_050219_2,5035,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5036 25.292 268.0 371620.0 25 0 19595.0 + 31608 RQVTGVTRV 9 128 339.2044720716481 1014.5915868151444 3 339.2045776247978 MULTI CID FTMS 0 0 0 5032 154198.1875 0.7826326594525329 -1 0.0362873077392578 4 Unmodified _RQVTGVTRV_ ENSG00000196531|ENST00000454682|NACA;nc|ENSG00000196531|E9PAV3-2|NACA;nc|ENSG00000196531|Q13765|NACA 18.373094154950223 0.3393451798331396 4 {[{M(Oxidation (M))|F}H]|[RQ]}VTGVVTR 9 2 {[{M(Oxidation (M))|F}H]|[RQ]}V + + 23.875 7.4473 1.9433 2.3532 2.3532 44.932 0.0 0.0 0.0 0.0 14.411225100727592 0.0 0.0 0 0.75 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}VTGVVTR 2.3532 - 195 + 1 2.689 86234.2 1.0 1149 3885 5032 HBL1_DMSO_200M_050219_2,5036 HBL1_DMSO_200M_050219_2,5036,RQVTGVTRV False True RQVTGVTRV 25.292061 339.204577624798 4486218.75 5032.0 ENSG00000196531|ENST00000454682|NACA;;nc|ENSG00000196531|E9PAV3-2|NACA;;nc|ENSG00000196531|Q13765|NACA 0.8792054454485575 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5037 25.298 350.0 627070.0 25 0 79558.0 + 5276 DKVKLELKV 9 143 357.89742665665455 1070.6704505701637 3 357.8972961306572 MULTI CID FTMS 0 0 0 5032 126546.2421875 0.0154165218596446 -10 0.1984462738037109 5 Unmodified _DKVKLELKV_ ENSG00000130779|ENST00000620786|CLIP1;ENST00000543205.1_1_12:122762601-122763649:-|nuORF;nc|ENSG00000130779|P30622-1|CLIP1;nc|ENSG00000130779|P30622-2|CLIP1 38.61474834105838 0.0830609365873449 4 {I|L}{I|L}DKKD{I|L}KV 9 5 + 68.573 0.0 0.0 6.4047 6.4047 82.34 0.0 0.0 0.0 33.46787486224656 4.97324640807949 4.97324640807949 4.97324640807949 0 0.4645069810232298 1.6989700043360187 0.3807196863200844 0.5418727718234408 {I|L}{I|L}DKKD{I|L}KV;{I|L}{I|L}DKKD{I|L}VK;{I|L}{I|L}V[SG]KD{I|L}KV;{I|L}{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EP{I|L};{I|L}{I|L}V[SG]KD{I|L}VK;{I|L}{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}E{I|L}P;{I|L}VEKKD{I|L}KV;{I|L}VEKKD{I|L}VK;{I|L}V{I|L}[SG]KD{I|L}KV;{I|L}V{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EP{I|L} 6.4047;5.9402;5.4957;5.0877;5.0312;4.7765;4.2356;3.7711;3.3267;2.9186 -;-;-;-;-;-;-;-;-;- 903 + 1 2.689 181819.8 1.0 1150 3885 5032 HBL1_DMSO_200M_050219_2,5037 HBL1_DMSO_200M_050219_2,5037,DKVKLELKV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5039 25.303 63.0 808960.0 25 0 71256.0 -1 ESATITCLV 9 80 497.2498619559365 0 497.2498657107353 PEAK CID FTMS 0 0 0 5038 964000.3125 0.7408753335475006 -9 0.2056465148925781 1 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 48.345845343767074 0.036192834052621 4 ATP{I|L}T 5 -1 37.708 0.0 0.0 3.7994 0.0 0.0 216.07427454607404 290.1186922662719 506.192966812346 0.0 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.7614393726401688 0.0 ATP{I|L}T 3.7994 - 46 + 1 2.689 43117.8 1.0 1151 3886 5038 HBL1_DMSO_200M_050219_2,5039 HBL1_DMSO_200M_050219_2,5039,ESATITCLV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 5040 25.306 135.0 459190.0 25 0 79757.0 + 22195 LPQEQRSV 8 67 478.76166697188273 955.5087810105656 2 478.7619201540947 MULTI CID FTMS 0 0 0 5038 570969.625 1.0 0 0.0 2 Unmodified _LPQEQRSV_ ENSG00000185043|ENST00000328649|CIB1;nc|ENSG00000185043|Q99828-2|CIB1 36.12702656103203 0.299085846329477 4 {I|L}PQEQ 5 3 67.677 0.0 0.0 7.0829 0.0 0.0 0.0 357.18866907291255 357.18866907291255 43.496075289514096 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 1.1307196863200843 + {I|L}PQEQ 7.0829 + + 227 + 1 2.689 53686.9 1.0 1152 3886 5038 HBL1_DMSO_200M_050219_2,5040 HBL1_DMSO_200M_050219_2,5040,LPQEQRSV False True LPQEQRSV 25.305901 478.761920154095 6351120.5 5038.0 ENSG00000185043|ENST00000328649|CIB1;;nc|ENSG00000185043|Q99828-2|CIB1 5.167426427205403 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5041 25.308 94.0 740350.0 25 0 72572.0 + 32562 SARTPGPAV 9 94 428.2376556889 854.4607584446001 2 428.2376281619072 MULTI CID FTMS 0 0 0 5038 522531.625 0.5581002615836511 -10 0.2276668548583984 3 Unmodified _SARTPGPAV_ ENSG00000178741|ENST00000322347|COX5A 24.99096001346401 0.2132109383330889 4 {[SA]|[TG]}RT[PG]PAV 9 0 + 35.541 0.0 0.0 4.1594 4.1594 72.156 0.0 0.0 0.0 2.0408012576557653 34.12075244359464 2.0408012576557653 4.148213714964847 0 0.7302046884880937 1.0457574905606752 0.4247425010840047 0.0 + + {[SA]|[TG]}RT[PG]PAV;[WK]T[PG]PAV;[PG]QQ[KG]AAV;[PG]QQ[KQ]AV 4.1594;3.674;1.1281;0.7222 +;-;-;- + 52 1 2.689 58400.2 1.0 1153 3886 5038 HBL1_DMSO_200M_050219_2,5041 HBL1_DMSO_200M_050219_2,5041,SARTPGPAV False True SARTPGPAV 25.307943 428.237628161907 8495630.0 5038.0 ENSG00000178741|ENST00000322347|COX5A -0.1684768994649251 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5042 25.322 800.0 121730.0 25 0 10971.0 + 32319 RYIGKTMDY 9 114 581.7817863057181 1161.5490196782362 2 581.7817260622978 MULTI CID FTMS 0 0 0 5038 133517.46875 0.8164838991025203 -1 0.0332984924316406 4 Oxidation (M) _RYIGKTM(Oxidation (M))DY_ ENSG00000143314|ENST00000361531|MRPL24;ENST00000478899.1_1_1:156707192-156707995:-|nuORF 49.55428908609986 0.0413471690215031 4 [YR]{I|L}GKT{M(Oxidation (M))|F}DY 9 0 + 46.429 0.0 0.0 3.9972 3.9972 65.951 0.0 0.0 0.0 1.1330919368472507 6.885666926007197 1.1330919368472507 1.1330919368472507 0 1.7326446478103827 0.0 0.5 0.0 + + [YR]{I|L}GKT{M(Oxidation (M))|F}DY;YR{I|L}GKT{M(Oxidation (M))|F}DY;[MN]DT{[HG]|PP}KK[MT] 3.9972;3.8996;1.2037 +;-;- + 186 1 2.689 76523.2 0.550000011920929 1154 3886 5038 HBL1_DMSO_200M_050219_2,5042 HBL1_DMSO_200M_050219_2,5042,RYIGKTMDY True False RYIGKTMDY 25.321774 581.781726062298 966847.0 5038.0 ENSG00000143314|ENST00000361531|MRPL24;;ENST00000478899.1_1_1:156707192-156707995:-|nuORF 9.732859452565512 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5044 25.338 800.0 43389.0 25 0 4351.5 + -1 EWDRWMVRFYY 11 79 833.874869382519 1665.735185831838 2 833.8745605349541 MULTI CID FTMS 0 0 0 5043 50743.296875 0.4974520214376838 1 -0.0291156768798828 1 Oxidation (M) _EWDRWM(Oxidation (M))VRFYY_ REV__ENST00000558045.2_1_14:24608221-24608440:-|nuORF 1.4819007175156935 0.86815623132643 4 {NN|[MP]|[D{I|L}]|[EV]}PTT{I|L}SGNS 10 -1 41.257 0.0 0.0 2.4768 0.0 0.0 0.0 677.2662276621692 677.2662276621692 3.913187455970544 0.0 0.0 0.0 0 0.0 0.0 2.075257498915996 0.5 {NN|[MP]|[D{I|L}]|[EV]}PTT{I|L}SGNS 2.4768 - 1303 1 2.689 28169.5 0.4300000071525574 1155 3887 5043 HBL1_DMSO_200M_050219_2,5044 HBL1_DMSO_200M_050219_2,5044,EWDRWMVRFYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5045 25.34 84.0 769590.0 25 0 97604.0 42307 VSVAAVGG 8 86 330.1904524780111 658.3663520228222 2 330.1899291872978 MULTI CID FTMS 0 0 0 5043 346300.65625 1.0 0 0.0 2 Unmodified _VSVAAVGG_ ENSG00000198646|ENST00000359003|NCOA6 9.347437153973935 0.7675937258251505 4 [DV]AN[K{I|L}] 6 6 + 33.715 0.0 0.0 5.121 5.121 82.951 0.0 0.0 0.0 10.66540461883358 4.973024840566467 4.973024840566467 9.420080530223132 0 0.3252574989159953 2.0 0.0 0.3807196863200844 [DV]AN[K{I|L}];[DV]AGG[K{I|L}];[VS][Q{I|L}]{[NV]|[RG]} 5.121;3.6902;3.2222 -;-;- 90 + 1 2.689 55633.1 1.0 1156 3887 5043 HBL1_DMSO_200M_050219_2,5045 HBL1_DMSO_200M_050219_2,5045,VSVAAVGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5046 25.351 620.0 137810.0 25 0 25840.0 + 27465 KPEGTPQRI 9 92 513.2906246620578 1024.5666963909157 2 513.2910644412041 MULTI CID FTMS 0 0 0 5043 140209.0625 0.6097540755913542 -6 0.1205902099609375 3 Unmodified _PKEQALSPR_ ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 16.149105407346934 0.3995459350917656 4 KPE 3 7 36.682 0.0 0.0 3.5803 0.0 0.0 0.0 667.3529089472722 667.3529089472722 17.21848749616356 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.5 0.0 KPE 3.5803 - 60 + 1 2.689 71001.1 1.0 1157 3887 5043 HBL1_DMSO_200M_050219_2,5046 HBL1_DMSO_200M_050219_2,5046,PKEQALSPR False False KPEGTPQRI 25.350903 513.291064441204 3783572.75 5043.0 ENSG00000177853|ENST00000316045|ZNF518A;;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 2.855110317468643 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5048 25.356 22.0 2003400.0 25 0 235800.0 + 16473 KAISGVHTV 9 70 456.2689001490681 910.5232473649362 2 456.2690917849541 MULTI CID FTMS 0 0 0 5047 2686869.5 0.7820631067095731 3 -0.0697078704833984 1 Unmodified _KAISGVHTV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 57.72198328787511 0.0273433238377839 4 EVRAKTV 7 7 38.04 0.0 0.0 4.1778 0.0 0.0 109.06453902412264 0.0 109.06453902412264 0.0 9.706998156251244 0.0 0.0 0 0.5 0.0 0.0 0.0 EVRAKTV 4.1778 - 218 1 2.689 40675.4 1.0 1158 3888 5047 HBL1_DMSO_200M_050219_2,5048 HBL1_DMSO_200M_050219_2,5048,KAISGVHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5049 25.366 565.0 150680.0 25 0 14058.0 + 21195 LPDATSSHRTV 11 91 592.3069723544311 1182.599391775662 2 592.3072387576103 MULTI CID FTMS 0 0 0 5047 158353.578125 0.1945960307331279 -24 0.4375457763671875 2 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 46.340004068617176 0.1378990705405701 4 {I|L}PDATS{I|L}TTAD 11 5 86.456 0.0 0.0 7.3107 0.0 0.0 0.0 94.0305651300414 94.0305651300414 80.97116909643377 0.0 0.0 0.0 0 0.9916440611282624 1.6989700043360187 0.7134679910804405 0.0 {I|L}PDATS{I|L}TTAD 7.3107 - 288 + 1 2.689 69370.0 1.0 1159 3888 5047 HBL1_DMSO_200M_050219_2,5049 HBL1_DMSO_200M_050219_2,5049,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5050 25.369 173.0 563250.0 25 0 51436.0 + 14769 ILDKKVEKV 9 94 536.3423747289274 1070.6701965246548 2 536.3425781130791 MULTI CID FTMS 0 0 0 5047 399029.28125 0.1868979321776566 -7 0.1497058868408203 3 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 48.56086444690353 0.0435252967961103 4 {I|L}{I|L}DKKVEKV 9 0 + 84.139 0.0 0.0 7.8585 7.8585 96.505 0.0 0.0 0.0 34.22671374822418 14.70451315270327 14.70451315270327 40.51152522447381 0 2.0356668758921828 2.0 0.3807196863200844 0.2742275032520141 + + {I|L}{I|L}DKKVEKV;V{[QN]|[E{I|L}]|[KN]}KKVEKV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KDK{I|L}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}KVEK{I|L}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KKD{I|L}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}DK{I|L}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KD{I|L}{I|L}KV;{[QD]|[EN]|[WG]|[KD]|[RS]}KVE{I|L}{I|L}KV;{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}KD{I|L}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KD{I|L}K{I|L}V 7.8585;4.0748;3.4762;3.4137;3.3118;3.1325;3.105;3.0425;2.9681;2.9139 +;-;-;-;-;-;-;-;-;- + 498 + 1 2.689 78476.8 1.0 1160 3888 5047 HBL1_DMSO_200M_050219_2,5050 HBL1_DMSO_200M_050219_2,5050,ILDKKVEKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5052 25.377 296.0 208240.0 25 0 25473.0 + 39443 VANTMRTSL 9 86 504.7609549922325 1007.5073570512652 2 504.7607604861259 MULTI CID FTMS 0 0 0 5051 210604.375 0.8020467762833202 2 -0.0516567230224609 1 Oxidation (M) _VANTM(Oxidation (M))RTSL_ ENSG00000150753|ENST00000280326|CCT5;ENST00000508451.1_1_5:10250422-10254994:+|nuORF;ENST00000510326.5_1_5:10250452-10254343:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5 43.77239144664712 0.0547478964384323 4 VANT{M(Oxidation (M))|F} 5 4 67.123 0.0 0.0 6.6623 0.0 0.0 0.0 472.25388513736567 472.25388513736567 30.93704052456225 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.3494850021680094 + VANT{M(Oxidation (M))|F} 6.6623 + + 87 + 1 2.689 51305.1 1.0 1161 3889 5051 HBL1_DMSO_200M_050219_2,5052 HBL1_DMSO_200M_050219_2,5052,VANTMRTSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5053 25.391 800.0 107360.0 25 0 8470.9 + 24154 LYQPRASEM 9 99 555.7654611627511 1109.516369392302 2 555.7663452029228 MULTI CID FTMS 0 0 0 5051 97368.9375 0.7870727130211302 -2 0.0471668243408203 2 Oxidation (M) _LYQPRASEM(Oxidation (M))_ ENSG00000168081|ENST00000301908|PNOC;nc|ENSG00000168081|Q13519-2|PNOC 41.8396318013385 0.0653578398400075 4 {I|L}YQ[WD]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 8 5 + 61.661 0.0 0.0 5.5574 5.5574 81.364 0.0 0.0 0.0 41.928571858695136 3.913187455970544 3.913187455970544 7.373796257579102 0 0.4247425010840047 2.0 0.805462187404089 0.3494850021680094 {I|L}YQ[WD]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{I|L}YQ[QP]{[YD]|[{M(Oxidation (M))|F}M]}[PS];{I|L}YQ[C(Carbamidomethyl (C))Q][KS][PS];{I|L}Y[AG][WD]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[Y{I|L}]Q[YT][Y{I|L}]{M(Oxidation (M))|F};[Y{I|L}][YT]T[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F};[Y{I|L}][YT]Q[Y{I|L}]{M(Oxidation (M))|F};[TP]W{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F};[YQ]{I|L}[YT][Y{I|L}]{M(Oxidation (M))|F};[Y{I|L}][YT]{NN|[MP]|[D{I|L}]|[EV]}[WH] 5.5574;4.8928;4.4628;4.4076;3.3696;3.3208;2.4889;1.513;1.233;1.1388 -;-;-;-;-;-;-;-;-;- 484 + 1 2.689 70471.7 0.4799999892711639 1162 3889 5051 HBL1_DMSO_200M_050219_2,5053 HBL1_DMSO_200M_050219_2,5053,LYQPRASEM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5054 25.398 423.0 299590.0 25 0 20708.0 + 45085 YPYLVDVP 8 124 322.5042583010333 964.4909455033 3 322.5041992068291 MULTI CID FTMS 0 0 0 5051 86377.4375 1.0 0 0.0 3 Unmodified _YPYLVDVP_ REV__ENSG00000105135|ENST00000263383|ILVBL;REV__ENST00000533086.5_1_19:15228578-15234387:-|nuORF 15.768221252438446 0.6779680726941459 4 AMSPV 5 -1 34.711 0.0 0.0 3.5989 0.0 0.0 461.2389088361344 0.0 461.2389088361344 0.0 18.257659435244733 0.0 0.0 0 0.6307196863200843 0.0 0.4247425010840047 0.0 AMSPV 3.5989 - 189 1 2.689 105618.4 1.0 1163 3889 5051 HBL1_DMSO_200M_050219_2,5054 HBL1_DMSO_200M_050219_2,5054,YPYLVDVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5056 25.405 169.0 260900.0 25 0 24542.0 + 45858 YYQLCSLM 8 73 510.7288077712923 1019.4430626093846 2 510.7272521853447 MULTI CID FTMS 0 0 0 5055 68655.25 0.6214807028774735 -2 0.0473880767822265 1 Unmodified _YYQLCSLM_ REV__ENSG00000138031|ENST00000679454|ADCY3 19.438996006549623 0.6237395211498085 4 YYQG[RH]D 7 -1 43.957 0.0 0.0 4.3119 0.0 0.0 0.0 97.04126917056874 97.04126917056874 31.4828069691076 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.3807196863200844 YYQG[RH]D 4.3119 - 57 + 1 2.689 36848.3 1.0 1164 3890 5055 HBL1_DMSO_200M_050219_2,5056 HBL1_DMSO_200M_050219_2,5056,YYQLCSLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5057 25.419 800.0 56998.0 25 0 12495.0 -1 0 66 529.7392256529054 2114.9277967452213 4 529.9899780154228 MULTI CID FTMS 0 0 0 5055 45834.34375 0.6928517112331737 1 -0.0223197937011718 2 4 [Q{I|L}]W 3 -1 14.705 0.0 0.0 0.6953 0.0 0.0 0.0 1684.684666954148 1684.684666954148 7.230749808046328 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [Q{I|L}]W 0.6953 - 48 + 1 2.689 44387.6 0.4000000059604645 1165 3890 5055 HBL1_DMSO_200M_050219_2,5057 HBL1_DMSO_200M_050219_2,5057, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5058 25.421 84.0 787620.0 25 0 103140.0 + 34896 SQIDQQNSV 9 99 509.7437306121858 1017.4729082911716 2 509.7438232302666 MULTI CID FTMS 0 0 0 5055 747995.4375 0.2328211638530176 -6 0.1695213317871093 3 Unmodified _SQIDQQNSV_ ENSG00000121931|ENST00000369763|LRIF1 66.45667989310934 0.0225072657982126 4 {[QS]|[NT]}{I|L}DQQ 6 3 43.171 0.0 0.0 4.2429 0.0 0.0 0.0 315.1326122308779 315.1326122308779 15.436909460092004 0.0 0.0 0.0 0 0.3054621874040891 0.9208187539523752 0.566901560044258 0.6109243748081782 + {[QS]|[NT]}{I|L}DQQ 4.2429 + + 1059 1 2.689 58086.5 1.0 1166 3890 5055 HBL1_DMSO_200M_050219_2,5058 HBL1_DMSO_200M_050219_2,5058,SQIDQQNSV True True SQIDQQNSV 25.4207 509.743823230267 59051628.0 5055.0 ENSG00000121931|ENST00000369763|LRIF1 6.359566370646159 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5060 25.428 236.0 337800.0 25 0 48783.0 -1 0 87 485.2531013533277 484.24582488672775 1 485.2589599490166 MULTI CID FTMS 0 0 0 5059 187289.40625 0.8344914130006095 -2 0.0516567230224609 1 4 SV 2 -1 16.594 0.0 0.0 3.4267 0.0 0.0 280.1343727156324 0.0 280.1343727156324 0.0 13.494850021680094 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 SV 3.4267 - 15 + 1 2.689 68046.4 1.0 1167 3891 5059 HBL1_DMSO_200M_050219_2,5060 HBL1_DMSO_200M_050219_2,5060, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5061 25.434 346.0 479960.0 25 0 61066.0 + 15063 RYAVRRSL 8 107 340.873679617195 1019.5992094517852 3 340.8733093142509 MULTI CID FTMS 0 0 0 5059 136297.4375 0.5071951878812306 -4 0.0988235473632812 2 Unmodified _IMGVIRGKF_ ENSG00000177981|ENST00000317697|ASB8 8.593279151180031 0.6146971463335029 4 {I|L}R 2 7 25.217 0.0 0.0 2.4732 0.0 0.0 0.0 747.3908644276563 747.3908644276563 13.244127758107956 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + {I|L}R 2.4732 + + 35 + 1 2.689 136026.5 1.0 1168 3891 5059 HBL1_DMSO_200M_050219_2,5061 HBL1_DMSO_200M_050219_2,5061,IMGVIRGKF False False RYAVRRSL 25.43384 340.873309314251 1832422.25 5059.0 ENSG00000177981|ENST00000317697|ASB8 -0.0605314175287882 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5062 25.438 239.0 328890.0 25 0 24658.0 + 39279 VADKKARLI 9 122 338.5539517071138 1012.6400257215414 3 338.5536987185478 MULTI CID FTMS 0 0 0 5059 89506.9765625 0.9651995025431396 -2 0.0516567230224609 3 Unmodified _VADKKARLI_ ENSG00000106344|ENST00000223073|RBM28 10.150570793230772 0.5619192000662246 4 VWKK 4 6 33.282 0.0 0.0 3.2867 0.0 0.0 0.0 468.2937470484535 468.2937470484535 21.49946864784468 0.0 0.0 0.0 0 0.1344005005252609 0.0 0.0 0.0 VWKK 3.2867 - 190 + 1 2.689 68286.6 1.0 1169 3891 5059 HBL1_DMSO_200M_050219_2,5062 HBL1_DMSO_200M_050219_2,5062,VADKKARLI False True VADKKARLI 25.438304 338.553698718548 609427.0 5059.0 ENSG00000106344|ENST00000223073|RBM28 2.66307536760966 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5063 25.452 800.0 137580.0 25 0 11081.0 4781 DELYYEIIRMH 11 123 494.5755765118027 1480.704900135608 3 494.5758544802666 MULTI CID FTMS 0 0 0 5059 88482.4375 1.0 0 0.0 4 Unmodified _DELYYEIIRMH_ ENSG00000120029|ENST00000370033|ARMH3;nc|ENSG00000120029|Q5T2E6-2|ARMH3;nc|ENSG00000120029|Q5T2E6-3|ARMH3 12.240655878213236 0.7805268987462184 4 YED{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PE 8 8 57.326 0.0 0.0 3.8715 0.0 0.0 0.0 472.251281803699 472.251281803699 36.15479093331686 0.0 0.0 0.0 0 0.6435078169319297 2.0 0.4247425010840047 0.4247425010840047 YED{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PE 3.8715 - 720 + 1 2.689 87321.0 0.4600000083446502 1170 3891 5059 HBL1_DMSO_200M_050219_2,5063 HBL1_DMSO_200M_050219_2,5063,DELYYEIIRMH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5065 25.468 800.0 117520.0 25 0 27601.0 -1 0 64 851.3702261609915 1700.7258993887829 2 851.3707763552666 MULTI CID FTMS 0 0 0 5064 82396.03125 0.564606294053104 5 -0.126626968383789 1 4 [{I|L}T]PMP 5 -1 19.476 0.0 0.0 1.1452 0.0 0.0 0.0 1158.4321121175517 1158.4321121175517 9.387568628841263 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 [{I|L}T]PMP 1.1452 - 47 1 2.689 70805.0 0.449999988079071 1171 3892 5064 HBL1_DMSO_200M_050219_2,5065 HBL1_DMSO_200M_050219_2,5065, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5066 25.482 800.0 152330.0 25 0 18302.0 -1 NTDMYSPNV 9 117 528.7171462563707 1055.419739579541 2 528.7177001833916 MULTI CID FTMS 0 0 0 5064 94428.9609375 0.5338926137440309 -4 0.1010761260986328 2 Oxidation (M) _NTDM(Oxidation (M))YSPNV_ ENSG00000144711|ENST00000613206|IQSEC1;nc|ENSG00000144711|Q6DN90-2|IQSEC1;nc|ENSG00000144711|Q6DN90|IQSEC1 18.1463463914782 0.3454829746528889 4 VSAAD 5 -1 30.585 0.0 0.0 2.8979 0.0 0.0 0.0 609.1963595025999 609.1963595025999 6.935209233789543 0.0 0.0 0.0 0 0.8366968715561641 0.0 0.0 0.0 VSAAD 2.8979 - 288 + 1 2.689 96183.4 0.4799999892711639 1172 3892 5064 HBL1_DMSO_200M_050219_2,5066 HBL1_DMSO_200M_050219_2,5066,NTDMYSPNV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5068 25.489 129.0 505210.0 25 0 33990.0 + 24776 MPHPATGKTV 10 103 519.7732522964333 1037.5319516596664 2 519.7739745974541 MULTI CID FTMS 0 0 0 5067 429249.5625 0.8697692139503373 2 -0.0363712310791015 1 Unmodified _MPHPATGKTV_ ENSG00000070814|ENST00000643257|TCOF1;ENST00000515035.5_1_5:149748314-149754605:+|nuORF;nc|ENSG00000070814|Q13428-2|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;nc|ENSG00000070814|Q13428-5|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428|TCOF1 43.77239144664712 0.1177314611616471 4 [{M(Oxidation (M))|F}V]VTHVHTV 9 7 + 46.574 0.0 0.0 4.4889 4.4889 70.562 0.0 0.0 0.0 1.0474466634404322 3.5630575135042832 1.0474466634404322 2.586103082625684 0 0.3494850021680094 0.0 1.2614393726401687 0.0 [{M(Oxidation (M))|F}V]VTHVHTV;{NN|[MP]|[D{I|L}]|[EV]}H{I|L}{I|L}TV{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]VHTVHTV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}HTV{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]HVTVHTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{I|L}{I|L}TV{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}THV{NN|[MP]|[D{I|L}]|[EV]};{[MS]|[{M(Oxidation (M))|F}A]}EVHVHTV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}TVH{NN|[MP]|[D{I|L}]|[EV]};[KG]T[PA]HTV{NN|[MP]|[D{I|L}]|[EV]} 4.4889;4.2396;3.8453;3.4442;3.1882;3.0035;2.8007;2.4789;2.1436;1.6278 -;-;-;-;-;-;-;-;-;- 373 + 1 2.682 53637.6 1.0 1173 3893 5067 HBL1_DMSO_200M_050219_2,5068 HBL1_DMSO_200M_050219_2,5068,MPHPATGKTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5069 25.491 104.0 903240.0 25 0 120730.0 + 24777 MPHPATGKTV 10 88 346.85160239354883 1037.5329777808463 3 346.8515197634697 MULTI CID FTMS 0 0 0 5067 444309.1875 0.8053563107993886 7 -0.1799488067626953 2 Unmodified _MPHPATGKTV_ ENSG00000070814|ENST00000643257|TCOF1;ENST00000515035.5_1_5:149748314-149754605:+|nuORF;nc|ENSG00000070814|Q13428-2|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;nc|ENSG00000070814|Q13428-5|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428|TCOF1 19.361941925380144 0.5226674314761524 4 P 1 9 13.099 0.0 0.0 1.2625 0.0 0.0 922.46907199647 0.0 922.46907199647 0.0 -10.138050198288012 -10.138050198288012 0.0 0 0.0 0.0 0.0 0.0 + P 1.2625 + + 120 + 1 2.682 79304.5 1.0 1174 3893 5067 HBL1_DMSO_200M_050219_2,5069 HBL1_DMSO_200M_050219_2,5069,MPHPATGKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5070 25.505 800.0 184070.0 25 0 14953.0 + 39293 VADPETRTV 9 144 494.2590283992352 986.5035038652704 2 494.2588378787041 MULTI CID FTMS 0 0 0 5067 145916.609375 0.0293096464512046 -19 0.4481754302978515 3 Unmodified _VADPETRTV_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 36.506200033944 0.094635877243972 4 VADPE 5 4 68.703 0.0 0.0 6.9643 0.0 0.0 0.0 472.25276994230927 472.25276994230927 44.266162532595686 0.0 0.0 0.0 0 0.9775237221401504 1.6989700043360187 0.8494850021680094 0.0 + VADPE 6.9643 + + 600 + 1 2.682 111498.8 0.5799999833106995 1175 3893 5067 HBL1_DMSO_200M_050219_2,5070 HBL1_DMSO_200M_050219_2,5070,VADPETRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5071 25.515 575.0 138890.0 25 0 24514.0 + 35645 SVDAHTAEV 9 117 464.72219181014856 927.4298306870973 2 464.7223388552666 MULTI CID FTMS 0 0 0 5067 131089.34375 0.8956094234515364 -3 0.0838203430175781 4 Unmodified _SVDAHTAEV_ ENSG00000162521|ENST00000373493|RBBP4;nc|ENSG00000162521|Q09028-2|RBBP4;nc|ENSG00000162521|Q09028-3|RBBP4;nc|ENSG00000162521|Q09028-4|RBBP4 54.773552608820026 0.0299037012502309 4 [VS]DHGEVSV 9 5 + 60.136 0.0 0.0 6.4842 6.4842 83.196 0.0 0.0 0.0 19.266670900018177 16.478174818886373 16.478174818886373 5.568109453757657 0 0.5 2.0 0.7614393726401688 0.0 [VS]DHGEVSV;[VS]DHADVSV;[VS]DHG[VS]EV;[VS]DHV[SG]EV;[VS]DHA[TA]EV;[HA]DTAEVSV;[VS]DHV{[DA]|[EG]}SV;[HT]ADAEVSV;[VS][YN]EA{M(Oxidation (M))|F}V;[HA]TDAEVSV 6.4842;5.8838;5.0779;4.6674;4.4775;4.4067;4.2905;4.0841;3.9468;3.4757 -;-;-;-;-;-;-;-;-;- 1046 1 2.682 65927.8 1.0 1176 3893 5067 HBL1_DMSO_200M_050219_2,5071 HBL1_DMSO_200M_050219_2,5071,SVDAHTAEV True True SVDAHTAEV 25.51475 464.722338855267 818370.125 5067.0 nc|ENSG00000162521|Q09028-3|RBBP4;;ENSG00000162521|ENST00000373493|RBBP4;;nc|ENSG00000162521|Q09028-2|RBBP4;;nc|ENSG00000162521|Q09028-4|RBBP4 5.028561592102051 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5074 25.535 800.0 183930.0 25 0 13507.0 -1 PHQNSCNSV 9 170 521.7213933278573 1041.4282337225145 2 521.7220336794853 MULTI CID FTMS 0 0 0 5073 162240.390625 0.9593267204484416 -3 0.0665035247802734 1 Carbamidomethyl (C) _PHQNSC(Carbamidomethyl (C))NSV_ ENST00000395172.5_1_8:144124388-144130666:+|nuORF;ENST00000523099.5_1_8:144124388-144124505:+|nuORF;ENST00000524181.5_1_8:144124388-144125605:+|nuORF 37.97399986684836 0.0865783450051559 4 NQQ[C(Carbamidomethyl (C))C]SV 7 -1 50.449 0.0 0.0 4.8442 0.0 0.0 204.10963123919825 0.0 204.10963123919825 0.0 18.76947548519156 0.0 0.0 0 0.5451140161145328 0.0 1.5044321917401078 0.4247425010840047 NQQ[C(Carbamidomethyl (C))C]SV 4.8442 - 1230 + 1 2.682 117809.5 0.6399999856948853 1177 3895 5073 HBL1_DMSO_200M_050219_2,5074 HBL1_DMSO_200M_050219_2,5074,PHQNSCNSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5075 25.549 800.0 151710.0 25 0 16252.0 + 13018 HASPVRPTV 9 110 482.2723182742701 962.5300836153402 2 482.2725097537041 MULTI CID FTMS 0 0 0 5073 120693.4921875 0.5023031380292227 -5 0.1201915740966796 2 Unmodified _HASPVRPTV_ ENST00000332780.3_1_3:49209094-49210164:+|nuORF 29.84058131909904 0.1515068451768857 4 HASVPRTPV 9 4 + 74.216 0.0 0.0 7.7105 7.7105 87.138 0.0 0.0 0.0 27.801397992312005 5.770143314640521 5.770143314640521 5.770143314640521 0 1.5669015600442575 1.6989700043360187 0.4247425010840047 0.0 HASVPRTPV;HASVPRTVP;HAVSPRTPV;HAVSPRTVP;HASV{[TV]|[{I|L}S]}[RP]P;HAVS{[TV]|[{I|L}S]}[RP]P;VAHSPRTPV;VAHSPRTVP;[EP][HK]RTPV;[EP][HK]RTVP 7.7105;7.111;6.9565;6.357;4.9085;4.1544;2.6647;2.0652;1.367;0.76755 -;-;-;-;-;-;-;-;-;- 324 + 1 2.682 99909.8 0.6800000071525574 1178 3895 5073 HBL1_DMSO_200M_050219_2,5075 HBL1_DMSO_200M_050219_2,5075,HASPVRPTV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5077 25.553 6.9 8846200.0 25 0 1977400.0 + 14771 ILDKKVEKV 9 73 357.89742665665455 1070.6704505701637 3 357.8973571658134 MULTI CID FTMS 0 0 0 5076 7943832.5 0.96775902048637 1 -0.0300502777099609 1 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 27.088373467376528 0.1865245257266215 4 {I|L}{I|L}DKKVEVK 9 2 + 79.849 0.0 0.0 7.4579 7.4579 77.869 0.0 0.0 0.0 36.47817481888637 0.5115252244738144 0.5115252244738144 0.5115252244738144 0 0.25 2.0 0.3807196863200844 0.0 {I|L}{I|L}DKKVEVK;{I|L}{I|L}DKKVEKV;{I|L}{I|L}V[SG]KVEVK;{I|L}{I|L}V[SG]KVEKV;{I|L}{I|L}DVKKEVK;{I|L}{I|L}DVKKEKV;{I|L}{I|L}VDKKEVK;{I|L}{I|L}VDKKEKV;{I|L}VEKKVEVK;{I|L}VEKKVEKV 7.4579;7.4101;6.4322;6.3845;6.3433;6.2956;6.1777;6.1299;5.3075;5.2597 -;+;-;-;-;-;-;-;-;- + 563 + 1 2.682 55365.6 1.0 1179 3896 5076 HBL1_DMSO_200M_050219_2,5077 HBL1_DMSO_200M_050219_2,5077,ILDKKVEKV False True ILDKKVEKV 25.553368 357.897357165813 164718076.0 5076.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 5.686429977416992 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5078 25.555 43.0 1261900.0 25 0 148250.0 + 21191 LPDATSSHRTV 11 64 395.2070450298864 1182.5993056898592 3 395.2068969607353 MULTI CID FTMS 0 0 0 5076 1282160.875 0.3659973400013373 -16 0.3874492645263672 2 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 26.345799442569017 0.4735952257064628 4 {I|L}PDATSSH 8 3 76.24 0.0 0.0 6.4468 0.0 0.0 0.0 371.2054044329368 371.2054044329368 50.297742913283 0.0 0.0 0.0 0 0.2887254899964357 1.2218487496163564 0.4247425010840047 0.0 + {I|L}PDATSSH 6.4468 + + 108 + 1 2.682 46838.4 1.0 1180 3896 5076 HBL1_DMSO_200M_050219_2,5078 HBL1_DMSO_200M_050219_2,5078,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5079 25.558 183.0 538140.0 25 0 156670.0 + -1 CPFDGHMY 8 92 329.1230167209408 0 329.0050536990166 PEAK CID FTMS 0 0 0 5076 23951.173828125 0.9637295694731236 2 -0.0501041412353515 3 Oxidation (M) _CPFDGHM(Oxidation (M))Y_ REV__ENSG00000130749|ENST00000253048|ZC3H4 1.844237919475145 0.5938792933265344 4 T 1 -1 7.7423 0.0 0.0 1.1798 0.0 0.0 226.99775102089927 325.1584566705688 552.1562076914681 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T 1.1798 - 11 + 1 2.682 84200.1 1.0 1181 3896 5076 HBL1_DMSO_200M_050219_2,5079 HBL1_DMSO_200M_050219_2,5079,CPFDGHMY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5080 25.565 382.0 199710.0 25 0 24598.0 + 17620 KPTAAFHLL 9 72 499.2932858985664 996.5720188639328 2 499.2934142947197 MULTI CID FTMS 0 0 0 5076 183514.890625 0.4088698409435994 -41 0.6959285736083984 4 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 4 KPT 3 -1 43.94 0.0 0.0 4.4091 0.0 0.0 0.0 667.3541514231507 667.3541514231507 29.137471167825417 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 KPT 4.4091 + + 36 + 1 2.682 64049.2 1.0 1182 3896 5076 HBL1_DMSO_200M_050219_2,5080 HBL1_DMSO_200M_050219_2,5080,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5081 25.579 800.0 132720.0 25 0 16854.0 + 36426 SYYDSHRQSV 10 92 621.2810106736871 1240.547468414174 2 621.2806884646416 MULTI CID FTMS 0 0 0 5076 103803.3984375 0.4409546522936298 -4 0.0965766906738281 5 Unmodified _SYYDSHRQSV_ ENSG00000155561|ENST00000285968|NUP205;ENST00000477620.5_1_7:135320372-135330929:+|nuORF 79.42699986076722 0.0175374121712975 4 SYYDSH 6 4 67.925 0.0 0.0 5.4754 0.0 0.0 0.0 485.2479375474216 485.2479375474216 35.490984809501704 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7302046884880937 0.0 + SYYDSH 5.4754 + + 147 + 1 2.682 84499.8 0.4799999892711639 1183 3896 5076 HBL1_DMSO_200M_050219_2,5081 HBL1_DMSO_200M_050219_2,5081,SYYDSHRQSV True True SYYDSHRQSV 25.578774 621.280688464642 1391841.25 5076.0 ENST00000477620.5_1_7:135320372-135330929:+|nuORF;;ENSG00000155561|ENST00000285968|NUP205 11.678854942321776 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5083 25.583 67.0 747510.0 25 0 59242.0 -1 ESATITCLV 9 80 497.2498619559365 0 497.2498657107353 PEAK CID FTMS 0 0 0 5082 908173.3125 0.6979699042549594 2 -0.0502071380615234 1 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 67.34385681178166 0.0146349057813071 4 ATP{I|L}T 5 -1 42.339 0.0 0.0 4.266 0.0 0.0 216.07496697652303 290.1185396783813 506.1935066549044 0.0 0.0 0.0 0.0 0 1.1861818737241734 0.0 1.1549471895720984 0.0 ATP{I|L}T 4.266 - 124 + 1 2.682 42937.8 1.0 1184 3897 5082 HBL1_DMSO_200M_050219_2,5083 HBL1_DMSO_200M_050219_2,5083,ESATITCLV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 5084 25.585 63.0 863420.0 25 0 106290.0 + 32563 SARTPGPAV 9 74 428.2376556889 854.4607584446001 2 428.2377502322197 MULTI CID FTMS 0 0 0 5082 717184.5 0.7660031238372225 1 -0.0200538635253906 2 Unmodified _SARTPGPAV_ ENSG00000178741|ENST00000322347|COX5A 21.53697664764585 0.2571576504437394 4 PAV 3 6 30.93 0.0 0.0 3.6198 0.0 0.0 569.2922199615886 0.0 569.2922199615886 0.0 29.3360688456422 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + PAV 3.6198 + + 23 1 2.682 47905.6 1.0 1185 3897 5082 HBL1_DMSO_200M_050219_2,5084 HBL1_DMSO_200M_050219_2,5084,SARTPGPAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5085 25.599 800.0 139910.0 25 0 10167.0 + 3344 AYNNQSNRL 9 134 540.2655798262401 1078.5166067192802 2 540.2666503787041 MULTI CID FTMS 0 0 0 5082 142690.296875 0.1312740793802191 -9 0.2277030944824218 3 Unmodified _AYNNQSNRL_ ENSG00000141076|ENST00000314423|UTP4;ENST00000569800.5_1_16:69167425-69171817:+|nuORF;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 53.832793166522166 0.0319663582346103 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSN[R{I|L}] 9 0 + 76.903 0.0 0.0 7.1304 7.1304 89.801 0.0 0.0 0.0 61.686296826175 4.137342758552691 4.137342758552691 9.208187539523747 0 0.75 2.0 0.3807196863200844 1.274227503252014 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGGQSN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSGG[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NN[AG]SN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGNQSN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQ{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGGQSGG[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGNQSGG[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGG[AG]SN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGN[AG]SN[R{I|L}] 7.1304;6.2766;6.2766;6.2766;6.2766;6.1298;5.4269;5.4269;5.4269;5.4269 +;-;-;-;-;-;-;-;-;- + 296 + 1 2.682 88897.6 0.5699999928474426 1186 3897 5082 HBL1_DMSO_200M_050219_2,5085 HBL1_DMSO_200M_050219_2,5085,AYNNQSNRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5087 25.615 800.0 152020.0 25 0 21306.0 + 17474 KPEQPKWL 8 114 513.2906246620578 1024.5666963909157 2 513.2908203005791 MULTI CID FTMS 0 0 0 5086 154833.09375 0.673352408661036 5 -0.1003494262695312 1 Unmodified _KPEQPKWL_ REV__ENST00000487819.5_2_1:6688669-6689713:+|nuORF 21.74664581756881 0.5868176546531598 4 KPE 3 -1 37.435 0.0 0.0 3.6537 0.0 0.0 0.0 667.354603611288 667.354603611288 17.971062485323515 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 KPE 3.6537 + + 65 + 1 2.682 96484.7 0.6600000262260437 1187 3898 5086 HBL1_DMSO_200M_050219_2,5087 HBL1_DMSO_200M_050219_2,5087,KPEQPKWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5088 25.629 800.0 166300.0 25 0 68511.0 + 27228 PGLSPLCPR 9 104 470.256694567385 0 470.2560302615166 PEAK CID FTMS 0 0 0 5086 109800.8125 0.4403075964904476 -38 0.7137355804443359 2 Unmodified _PGLSPLCPR_ REV__ENST00000553505.1_1_14:24046767-24047391:-|nuORF 11.640296217721598 0.2934555500198502 4 H 1 -1 3.4949 0.0 0.0 0.37239 0.0 0.0 684.3604370089904 114.05660425357657 798.417041262567 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.37239 - 34 + 1 2.682 109787.8 0.550000011920929 1188 3898 5086 HBL1_DMSO_200M_050219_2,5088 HBL1_DMSO_200M_050219_2,5088,PGLSPLCPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5090 25.634 48.0 1297800.0 25 0 118510.0 + 14770 ILDKKVEKV 9 95 536.3423747289274 1070.6701965246548 2 536.3425170779228 MULTI CID FTMS 0 0 0 5089 1109166.125 0.5195128902686367 4 -0.0701961517333984 1 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 44.94466952835103 0.0514539652423294 4 {I|L}{I|L}DK 4 5 59.553 0.0 0.0 5.5622 0.0 0.0 0.0 598.3578389426646 598.3578389426646 2.4409068908420224 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 + {I|L}{I|L}DK 5.5622 + + 450 + 1 2.682 52012.9 1.0 1189 3899 5089 HBL1_DMSO_200M_050219_2,5090 HBL1_DMSO_200M_050219_2,5090,ILDKKVEKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5091 25.645 653.0 153210.0 25 0 12348.0 + 16474 KAISGVHTV 9 139 456.2689001490681 910.5232473649362 2 456.2689697146416 MULTI CID FTMS 0 0 0 5089 149520.234375 0.0435206321003889 14 -0.2842693328857422 2 Unmodified _KAISGVHTV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 75.76082778847304 0.0188720312721366 4 HTV 3 6 36.176 0.0 0.0 3.9731 0.0 0.0 555.339127206585 0.0 555.339127206585 0.0 -4.836361030625916 -4.836361030625916 0.0 0 0.9978499570595204 0.0 0.0 0.0 + HTV 3.9731 + + 334 1 2.682 78951.5 1.0 1190 3899 5089 HBL1_DMSO_200M_050219_2,5091 HBL1_DMSO_200M_050219_2,5091,KAISGVHTV True True KAISGVHTV 25.645001 456.268969714642 53158026.0 5089.0 ENSG00000180574|ENST00000538173|EIF2S3B;;ENSG00000130741|ENST00000253039|EIF2S3;;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 5.091506322224935 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5092 25.648 169.0 453090.0 25 0 44855.0 + 21196 LPDATSSHRTV 11 76 592.3069723544311 1182.599391775662 2 592.3072997927666 MULTI CID FTMS 0 0 0 5089 368227.90625 0.4525043880275147 -13 0.3304576873779297 3 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 34.67350252821523 0.2944480012833759 4 {I|L}PDATS{I|L}TTAD 11 5 105.55 0.0 0.0 8.9249 0.0 0.0 0.0 94.0301989191039 94.0301989191039 94.57680186290656 0.0 0.0 0.0 0 1.035666875892183 1.6989700043360187 1.8539171939081167 0.0 {I|L}PDATS{I|L}TTAD 8.9249 - 525 + 1 2.682 61531.0 1.0 1191 3899 5089 HBL1_DMSO_200M_050219_2,5092 HBL1_DMSO_200M_050219_2,5092,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5093 25.662 800.0 177780.0 25 0 21020.0 -1 0 123 439.184072249621 438.176795783021 1 439.1844665408134 MULTI CID FTMS 0 0 0 5089 102769.84375 0.4557092931017508 7 -0.125946044921875 4 4 [VS]{M(Oxidation (M))|F}S 4 -1 + 14.213 0.0 0.0 3.2436 3.2436 72.149 0.0 0.0 0.0 1.1138758983030073 1.1138758983030073 1.1138758983030073 6.465912507003607 0 0.0 0.0 0.1237125054200235 0.0 [VS]{M(Oxidation (M))|F}S;[{M(Oxidation (M))|F}V]SS 3.2436;1.768 -;- 36 1 2.682 117671.6 0.4799999892711639 1192 3899 5089 HBL1_DMSO_200M_050219_2,5093 HBL1_DMSO_200M_050219_2,5093, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5096 25.671 24.0 1297500.0 25 0 202150.0 + 34897 SQIDQQNSV 9 65 509.7437306121858 1017.4729082911716 2 509.7438842654228 MULTI CID FTMS 0 0 0 5095 1981108.875 0.6166402238209407 5 -0.0887470245361328 1 Unmodified _SQIDQQNSV_ ENSG00000121931|ENST00000369763|LRIF1 27.628801355627647 0.1796483985696185 4 {[QS]|[NT]}{I|L}DQN 6 3 22.171 0.0 0.0 2.179 0.0 0.0 0.0 329.15171623478415 329.15171623478415 4.445874519242668 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.25 {[QS]|[NT]}{I|L}DQN 2.179 - 264 1 2.682 29231.7 1.0 1193 3901 5095 HBL1_DMSO_200M_050219_2,5096 HBL1_DMSO_200M_050219_2,5096,SQIDQQNSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5097 25.674 163.0 348870.0 25 0 20910.0 + -1 DAVRTKMV 8 85 460.2548573781567 918.4951618231134 2 460.2551757693291 MULTI CID FTMS 0 0 0 5095 281244.9375 0.2032993549240532 -10 0.245401382446289 2 Oxidation (M) _PIM(Oxidation (M))VTLMV_ nc|ENSG00000149100|Q7L2H7-2|EIF3M;ENSG00000149100|ENST00000531120|EIF3M 36.46614268402704 0.2934124525509074 4 VADMV 5 -1 38.377 0.0 0.0 4.1782 0.0 0.0 385.2442494123063 0.0 385.2442494123063 0.0 10.388480167798363 0.0 0.0 0 0.7887254899964358 0.0 0.3807196863200844 0.0 VADMV 4.1782 - 108 1 2.682 49479.7 1.0 1194 3901 5095 HBL1_DMSO_200M_050219_2,5097 HBL1_DMSO_200M_050219_2,5097,PIMVTLMV False False DAVRTKMV 25.674024 460.255175769329 8187238.0 5095.0 nc|ENSG00000149100|Q7L2H7-2|EIF3M;;ENSG00000149100|ENST00000531120|EIF3M 1.5104988018671672 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5099 25.69 800.0 138610.0 25 0 14299.0 + 18115 KTLEQTKAI 9 119 516.3084966026087 1030.6024402720172 2 516.3090087771416 MULTI CID FTMS 0 0 0 5098 75631.4140625 0.6942492352790408 -1 0.0079498291015625 1 Unmodified _KTLEQTKAI_ ENSG00000120262|ENST00000239374|CCDC170 34.93206674587334 0.1032771302489716 4 KT{I|L}E[QT]{I|L}AK 9 2 + 74.636 0.0 0.0 7.242 7.242 95.202 0.0 0.0 0.0 64.35840673422928 16.97982344525242 16.97982344525242 48.44087307368427 0 1.960409376976188 0.0 0.7742275032520141 0.2887254899964357 KT{I|L}E[QT]{I|L}AK;[QT]E{I|L}{I|L}TKAK;[QT]{I|L}E{I|L}TKAK;{[ET]|[MV]}{I|L}Q{I|L}TKAK;{[ET]|[MV]}{I|L}[TA][KG]{I|L}AK;{[ET]|[MV]}Q{I|L}{I|L}TKAK;{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}[KG]{I|L}AK;[QT]E{I|L}[KT]{I|L}AK;[QT]{I|L}E[KT]{I|L}AK;[KA][C(Carbamidomethyl (C))R][KG]{I|L}AK 7.242;2.5417;2.4477;2.4153;2.2922;2.1232;2.0368;1.9625;1.8685;1.859 -;-;-;-;-;-;-;-;-;- 485 + 1 2.682 87237.4 0.4900000095367431 1195 3902 5098 HBL1_DMSO_200M_050219_2,5099 HBL1_DMSO_200M_050219_2,5099,KTLEQTKAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5100 25.699 492.0 224730.0 25 0 49950.0 -1 ILEELAMV 8 119 467.251203063513 0 467.2518493533134 PEAK CID FTMS 0 0 0 5098 104680.1640625 0.5943774254183712 -7 0.1554794311523437 2 Oxidation (M) _ILEELAM(Oxidation (M))V_ ENSG00000068831|ENST00000394432|RASGRP2;ENST00000421556.5_1_11:64494776-64511570:-|nuORF;ENST00000464324.5_1_11:64494776-64507712:-|nuORF;ENST00000465852.1_1_11:64502995-64504542:-|nuORF;ENST00000494001.5_1_11:64503317-64504482:-|nuORF;nc|ENSG00000068831|Q7LDG7-2|RASGRP2;nc|ENSG00000068831|Q7LDG7-4|RASGRP2 6.354104778181461 0.5763711549229614 4 P 1 -1 6.9897 0.0 0.0 0.74958 0.0 0.0 310.1647442600694 522.2476113153289 832.4123555753984 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.74958 - 5 + 1 2.682 87958.0 1.0 1196 3902 5098 HBL1_DMSO_200M_050219_2,5100 HBL1_DMSO_200M_050219_2,5100,ILEELAMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5102 25.707 289.0 275850.0 25 0 39308.0 -1 0 106 485.2531013533277 484.24582488672775 1 485.2589904665947 MULTI CID FTMS 0 0 0 5101 140218.9375 0.6247630425376457 10 -0.2140731811523437 1 4 SV 2 -1 16.198 0.0 0.0 3.345 0.0 0.0 280.1344337507887 0.0 280.1344337507887 0.0 5.67751260979451 0.0 0.0 0 0.0 0.0 0.0 0.0 SV 3.345 - 36 + 1 2.682 68645.9 1.0 1197 3903 5101 HBL1_DMSO_200M_050219_2,5102 HBL1_DMSO_200M_050219_2,5102, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5105 25.727 800.0 213910.0 25 0 65676.0 -1 0 113 464.2521322834267 463.2448558168267 1 464.2520629763603 MULTI CID FTMS 0 0 0 5104 168578.484375 0.4032069553107575 -6 0.0819549560546875 1 4 V 1 -1 14.208 0.0 0.0 3.0671 0.0 0.0 346.16524873850483 0.0 346.16524873850483 0.0 6.136218907515312 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.0 V 3.0671 - 24 + 1 2.682 135028.7 0.6899999976158142 1198 3905 5104 HBL1_DMSO_200M_050219_2,5105 HBL1_DMSO_200M_050219_2,5105, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5106 25.741 800.0 225520.0 25 0 40371.0 + 34624 SPLTHSPPDE 10 177 360.504417693256 1078.491423679968 3 360.5036804080009 MULTI CID FTMS 0 0 0 5104 100271.2265625 1.0 0 0.0 2 Unmodified _SPLTHSPPDE_ ENSG00000137161|ENST00000372836|CNPY3 5.783430956126388 0.6998847395148697 4 {I|L}PSSATY 7 8 43.854 0.0 0.0 4.0662 0.0 0.0 0.0 356.11652551822505 356.11652551822505 27.936457164228443 0.0 0.0 0.0 0 0.1861818737241735 0.9208187539523752 0.0 0.0 {I|L}PSSATY 4.0662 - 425 + 1 2.682 148388.6 0.5 1199 3905 5104 HBL1_DMSO_200M_050219_2,5106 HBL1_DMSO_200M_050219_2,5106,SPLTHSPPDE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5107 25.755 800.0 204560.0 25 0 45499.0 + 4319 DARQKFRSV 9 103 553.8078938349142 1105.6012347366284 2 553.8080932497978 MULTI CID FTMS 0 0 0 5104 90154.3828125 0.197303826692936 -8 0.1321620941162109 3 Unmodified _DARQKFRSV_ ENSG00000131370|ENST00000383791|SH3BP5;ENST00000426925.5_1_3:15314864-15374612:-|nuORF 28.49450938151212 0.1686335738423394 4 MPPE 4 9 45.732 0.0 0.0 4.1364 0.0 0.0 0.0 648.3955782525999 648.3955782525999 6.931890546242343 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.0 0.0 MPPE 4.1364 - 243 + 1 2.682 129214.1 0.5299999713897705 1200 3905 5104 HBL1_DMSO_200M_050219_2,5107 HBL1_DMSO_200M_050219_2,5107,DARQKFRSV False True DARQKFRSV 25.754798 553.808093249798 2751543.5 5104.0 ENSG00000131370|ENST00000383791|SH3BP5;;ENST00000426925.5_1_3:15314864-15374612:-|nuORF 4.500823895136516 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5109 25.76 21.0 2609500.0 25 0 352550.0 + 39294 VADPETRTV 9 62 494.2590283992352 986.5035038652704 2 494.2590515017509 MULTI CID FTMS 0 0 0 5108 2892027.75 0.5809092689491709 -6 0.0926990509033203 1 Unmodified _VADPETRTV_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 28.49450938151212 0.1686335738423394 4 VADPET 6 3 74.641 0.0 0.0 7.5662 0.0 0.0 0.0 371.2051180475219 371.2051180475219 66.05774396488272 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + VADPET 7.5662 + + 84 + 1 2.682 46656.0 1.0 1201 3906 5108 HBL1_DMSO_200M_050219_2,5109 HBL1_DMSO_200M_050219_2,5109,VADPETRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5110 25.761 49.0 933460.0 25 0 121170.0 37038 TGARSPAL 8 72 386.7191298325823 771.4237067319647 2 386.7191650271416 MULTI CID FTMS 0 0 0 5108 1362633.625 0.8451280317060942 -5 0.0887470245361328 2 Unmodified _TGARSPAL_ ENST00000546571.5_1_12:109124172-109124316:-|nuORF 38.17557092003332 0.2648138137323925 4 {[SA]|[TG]}AR[PS]A{I|L} 8 0 + 35.794 0.0 0.0 4.6399 4.6399 80.687 0.0 0.0 0.0 6.100840614449794 11.28530614985209 6.100840614449794 9.247425010840049 0 1.492992819099939 1.3010299956639813 0.5 0.0 + + {[SA]|[TG]}AR[PS]A{I|L};{[SA]|[TG]}AR[PG]T{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}T[PS]A{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}T[PG]T{I|L} 4.6399;3.4412;3.3287;2.13 +;-;-;- + 51 1 2.682 41424.1 1.0 1202 3906 5108 HBL1_DMSO_200M_050219_2,5110 HBL1_DMSO_200M_050219_2,5110,TGARSPAL False True TGARPSAL 25.761207 386.719165027142 20131916.0 5108.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 4.499988079071045 2.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5111 25.775 800.0 46163.0 25 0 2369.6 -1 DTWCCRRCKFC 11 82 796.3218997140812 1590.6292464949622 2 796.3231689333916 MULTI CID FTMS 0 0 0 5108 112356.46875 0.7583661306254326 -6 0.0926990509033203 3 3 Carbamidomethyl (C) _DTWC(Carbamidomethyl (C))C(Carbamidomethyl (C))RRC(Carbamidomethyl (C))KFC_ ENSG00000272333|ENST00000420124|KMT2B 1.3295316138638542 0.8688751186870782 4 G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YGSNGSY 10 -1 61.481 0.0 0.0 3.8652 0.0 0.0 543.2191645631248 0.0 543.2191645631248 0.0 21.541302161989627 0.0 0.0 0 0.0 0.0 2.129854553292708 0.3807196863200844 G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YGSNGSY 3.8652 - 3946 + 1 2.682 30311.3 0.4399999976158142 1203 3906 5108 HBL1_DMSO_200M_050219_2,5111 HBL1_DMSO_200M_050219_2,5111,DTWCCRRCKFC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5115 25.799 800.0 114370.0 25 0 12571.0 + 13019 HASPVRPTV 9 105 482.2723182742701 962.5300836153402 2 482.2726623415947 MULTI CID FTMS 0 0 0 5114 105401.765625 0.4386619085062933 9 -0.3179073333740234 1 Unmodified _HASPVRPTV_ ENST00000332780.3_1_3:49209094-49210164:+|nuORF 32.78568957990786 0.1150597335874693 4 HASP 4 5 63.29 0.0 0.0 6.5753 0.0 0.0 0.0 567.3337496393186 567.3337496393186 52.32061891068248 0.0 0.0 0.0 0 1.25 1.6989700043360187 0.4247425010840047 0.0 + HASP 6.5753 + + 77 + 1 2.682 74980.4 0.6299999952316284 1204 3909 5114 HBL1_DMSO_200M_050219_2,5115 HBL1_DMSO_200M_050219_2,5115,HASPVRPTV True True HASPVRPTV 25.799342 482.272662341595 2958114.5 5114.0 ENST00000332780.3_1_3:49209094-49210164:+|nuORF 7.138687610626221 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5116 25.813 800.0 214710.0 25 0 17491.0 + 4377 DAVKALKA 8 181 408.2532973133875 814.4920416935751 2 408.2528259158134 MULTI CID FTMS 0 0 0 5114 108515.375 0.8723102527714754 -1 0.0040016174316406 2 Unmodified _DAVKALKA_ ENSG00000023697|ENST00000428559|DERA;ENST00000528821.5_1_12:16109876-16185684:+|nuORF 56.17704186161178 0.1143274477948619 4 ADVKA{I|L}KA 8 2 + 70.569 0.0 0.0 8.6642 8.6642 84.874 0.0 0.0 0.0 3.0102999566398125 4.81128822287981 3.0102999566398125 3.0102999566398125 0 1.5044321917401078 1.6989700043360187 0.0 0.2396518287104437 ADVKA{I|L}KA;DAVKA{I|L}KA;ADVKA{I|L}AK;DAVKA{I|L}AK;ADVKA[KA]{I|L};DAVKA[KA]{I|L};WVRRKA;WVRRAK;WV[RK]RA;W[RK]VRA 8.6642;8.2946;8.0735;7.7039;5.9924;5.6228;4.5645;3.9738;2.9869;2.7864 -;+;-;-;-;-;-;-;-;- + 634 + 1 2.682 137094.7 0.5899999737739563 1205 3909 5114 HBL1_DMSO_200M_050219_2,5116 HBL1_DMSO_200M_050219_2,5116,DAVKALKA True True DAVKALKA 25.813157 408.252825915813 746035.8125 5114.0 ENST00000528821.5_1_12:16109876-16185684:+|nuORF;;ENSG00000023697|ENST00000428559|DERA 5.25990629196167 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5118 25.818 18.0 2740300.0 25 0 276760.0 + 21192 LPDATSSHRTV 11 70 395.2070450298864 1182.5993056898592 3 395.2069885134697 MULTI CID FTMS 0 0 0 5117 2835776.25 0.8094823236116665 -2 0.0341339111328125 1 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 26.345799442569017 0.4735952257064628 4 {I|L}PDATSSH 8 3 79.361 0.0 0.0 6.7107 0.0 0.0 0.0 371.2048128717407 371.2048128717407 51.9136756363956 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.8494850021680094 0.0 + {I|L}PDATSSH 6.7107 + + 129 + 1 2.682 50374.3 1.0 1206 3910 5117 HBL1_DMSO_200M_050219_2,5118 HBL1_DMSO_200M_050219_2,5118,LPDATSSHRTV False True LPDATSSHRTV 25.817898 395.20698851347 216967134.0 5117.0 ENSG00000172534|ENST00000310441|HCFC1;;nc|ENSG00000172534|P51610-2|HCFC1;;nc|ENSG00000172534|P51610-4|HCFC1 7.991741021474202 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5119 25.821 165.0 709240.0 25 0 88772.0 + 14772 ILDKKVEKV 9 115 357.89742665665455 1070.6704505701637 3 357.8971130251884 MULTI CID FTMS 0 0 0 5117 267212.84375 0.0325532593907131 15 -0.3729419708251953 2 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 32.89776655970281 0.1144444835665315 4 {I|L}{I|L}DKKVEKV 9 0 + 74.657 0.0 0.0 6.9729 6.9729 78.613 0.0 0.0 0.0 33.46787486224655 2.43038048686293 2.43038048686293 1.6501298457641127 0 0.3003373386386828 1.6989700043360187 0.899649864804614 0.5189301784845295 + + {I|L}{I|L}DKKVEKV;{I|L}{I|L}DKVKEKV;{I|L}{I|L}DKKVEVK;{I|L}{I|L}DKVKEVK;{I|L}{I|L}V[SG]KVEKV;{I|L}{I|L}V[SG]VKEKV;{I|L}{I|L}V[SG]KVEVK;{I|L}{I|L}V[SG]VKEVK;{I|L}{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]}KEKV;{I|L}VEKKVEKV 6.9729;6.8188;6.7459;6.5918;6.0639;5.9098;5.8369;5.6828;4.9733;4.831 +;-;-;-;-;-;-;-;-;- + 641 + 1 2.682 103464.8 1.0 1207 3910 5117 HBL1_DMSO_200M_050219_2,5119 HBL1_DMSO_200M_050219_2,5119,ILDKKVEKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5120 25.826 261.0 222600.0 25 0 25073.0 + 17621 KPTAAFHLL 9 75 499.2932858985664 996.5720188639328 2 499.2934753298759 MULTI CID FTMS 0 0 0 5117 163976.84375 0.3653392146771249 -27 0.5883998870849609 3 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 4 KPT 3 -1 38.94 0.0 0.0 3.9074 0.0 0.0 0.0 667.3531588190061 667.3531588190061 28.102707178935265 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 KPT 3.9074 + + 100 + 1 2.682 50411.8 1.0 1208 3910 5117 HBL1_DMSO_200M_050219_2,5120 HBL1_DMSO_200M_050219_2,5120,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5121 25.84 800.0 160010.0 25 0 22335.0 + -1 PQLCHRYL 8 117 543.7805663450163 1085.5465797568324 2 543.7806274294853 MULTI CID FTMS 0 0 0 5117 88942.359375 0.0378935750387063 -9 0.1470756530761718 4 Carbamidomethyl (C) _PQLC(Carbamidomethyl (C))HRYL_ REV__ENST00000475622.5_1_5:1463255-1463705:-|nuORF 32.116972079565 0.368454113111938 4 [QP]QDT[WK]A{I|L} 9 -1 [QP] + + 39.191 5.5855 2.4812 3.6102 3.6102 47.449 0.0 0.0 0.0 0.0 9.76133594908886 0.0 0.0 0 0.7887254899964358 0.0 0.2614393726401688 0.3494850021680094 [QP]QDT[WK]A{I|L} 3.6102 - 998 + 1 2.682 102839.4 0.4600000083446502 1209 3910 5117 HBL1_DMSO_200M_050219_2,5121 HBL1_DMSO_200M_050219_2,5121,PQLCHRYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5122 25.854 800.0 129360.0 25 0 16904.0 + -1 DAYMIASDCR 10 111 609.2496934581197 1216.4848339830394 2 609.2507202029228 MULTI CID FTMS 0 0 0 5117 88050.6875 0.0927291818918593 -6 0.106231689453125 5 Carbamidomethyl (C),Oxidation (M) _DAYM(Oxidation (M))IASDC(Carbamidomethyl (C))R_ REV__ENSG00000166704|ENST00000551380|ZNF606 29.081581746732265 0.3152867722954398 4 {[DA]|[EG]}YQTRKN 8 -1 75.372 0.0 0.0 6.1959 0.0 0.0 0.0 237.00129114322505 237.00129114322505 46.95529882148689 0.0 0.0 0.0 0 1.9124379954164592 1.6989700043360187 1.0044321917401078 0.3807196863200844 {[DA]|[EG]}YQTRKN 6.1959 - 457 + 1 2.682 80894.0 0.4399999976158142 1210 3910 5117 HBL1_DMSO_200M_050219_2,5122 HBL1_DMSO_200M_050219_2,5122,DAYMIASDCR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5124 25.858 56.0 688220.0 25 0 84376.0 + 3345 AYNNQSNRL 9 61 540.2655798262401 1078.5166067192802 2 540.2656127810478 MULTI CID FTMS 0 0 0 5123 911028.8125 0.8381401627789677 5 -0.1783866882324218 1 Unmodified _AYNNQSNRL_ ENSG00000141076|ENST00000314423|UTP4;ENST00000569800.5_1_16:69167425-69171817:+|nuORF;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 51.629811660486645 0.0367964933207742 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSN[R{I|L}] 9 0 + 83.918 0.0 0.0 7.7809 7.7809 91.447 0.0 0.0 0.0 68.34507800221289 5.642492736872597 5.642492736872597 9.208187539523747 0 1.274227503252014 2.0 0.0 1.2302046884880935 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NNQSGG[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NN[AG]SN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGGQSN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGNQSN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NN[AG]SGG[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGGQSGG[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGNQSGG[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGG[AG]SN[R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGN[AG]SN[R{I|L}] 7.7809;6.9271;6.9271;6.9271;6.9271;6.0774;6.0774;6.0774;6.0774;6.0774 +;-;-;-;-;-;-;-;-;- + 211 + 1 2.682 35335.0 1.0 1211 3911 5123 HBL1_DMSO_200M_050219_2,5124 HBL1_DMSO_200M_050219_2,5124,AYNNQSNRL True True AYNNQSNRL 25.858331 540.265612781048 13744949.0 5123.0 nc|ENSG00000141076|Q969X6-3|UTP4;;ENST00000569800.5_1_16:69167425-69171817:+|nuORF;;ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 8.24498208363851 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5125 25.872 800.0 23252.0 25 0 3490.0 -1 0 45 711.3096566745367 2841.2095208317464 4 711.5623657107353 MULTI CID FTMS 0 0 0 5123 53754.84375 0.6322152646014325 -1 0.0404300689697265 2 4 GC 2 -1 8.5835 0.0 0.0 0.30211 0.0 0.0 1969.8843998374089 708.2627657525999 2678.1471655900086 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GC 0.30211 - 39 + 1 2.682 22632.0 0.3899999856948852 1212 3911 5123 HBL1_DMSO_200M_050219_2,5125 HBL1_DMSO_200M_050219_2,5125, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5126 25.878 308.0 207080.0 25 0 35503.0 44966 YPRAAKVY 8 101 484.2715147900244 966.5284766468488 2 484.2716247439384 MULTI CID FTMS 0 0 0 5123 109388.453125 1.0 0 0.0 3 Unmodified _YPRAAKVY_ ENSG00000155890|ENST00000286349|TRIM42 18.13498045792455 0.6430038125133779 4 YP 2 6 38.5 0.0 0.0 3.9833 0.0 0.0 0.0 703.3904585875605 703.3904585875605 17.584784656551378 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + YP 3.9833 + + 180 + 1 2.682 53313.9 1.0 1213 3911 5123 HBL1_DMSO_200M_050219_2,5126 HBL1_DMSO_200M_050219_2,5126,YPRAAKVY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5127 25.892 800.0 138600.0 25 0 30581.0 + -1 LDTSAKAT 8 129 424.72189701363743 847.4292410940749 2 424.7220947146416 MULTI CID FTMS 0 0 0 5123 108044.078125 0.4121486200501696 -3 0.074563980102539 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LDTSAKAT_ REV__ENSG00000145012|ENST00000617246|LPP 20.453626601364224 0.6087503291685402 4 DTTQTK 6 -1 58.285 0.0 0.0 6.8779 0.0 0.0 155.09446635012097 0.0 155.09446635012097 0.0 46.80400924012389 0.0 0.0 0 0.805462187404089 0.0 1.6936726795685342 0.566901560044258 DTTQTK 6.8779 - 320 + 1 2.682 87166.0 0.4799999892711639 1214 3911 5123 HBL1_DMSO_200M_050219_2,5127 HBL1_DMSO_200M_050219_2,5127,LDTSAKAT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5128 25.905 800.0 179090.0 25 0 19171.0 + 3429 AYYNPGNPH 9 128 516.7300794708075 1031.4456060084149 2 516.7308837771416 MULTI CID FTMS 0 0 0 5123 101566.8828125 0.5197389535851565 -1 0.0404300689697265 5 Unmodified _AYYNPGNPH_ ENSG00000132471|ENST00000254806|WBP2;ENST00000587642.5_1_17:73842817-73843099:-|nuORF;nc|ENSG00000132471|Q969T9-2|WBP2 63.562846038646086 0.0241094678104353 4 S{M(Oxidation (M))|F}YNP[NG]PH 9 2 + 66.105 0.0 0.0 6.4089 6.4089 85.0 0.0 0.0 0.0 10.72515412307689 7.596678446896313 7.596678446896313 7.596678446896313 0 0.7059771852360797 0.0 0.0 1.045114016114533 S{M(Oxidation (M))|F}YNP[NG]PH;S{M(Oxidation (M))|F}YNP[NG]HP;S{M(Oxidation (M))|F}YGGP[NG]PH;S{M(Oxidation (M))|F}YN[RD]CK;S{M(Oxidation (M))|F}YGGP[NG]HP;S{M(Oxidation (M))|F}YGG[RD]CK;S{M(Oxidation (M))|F}Y[HQ][DV]H;S{M(Oxidation (M))|F}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MQP;S{M(Oxidation (M))|F}Y[HQ]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]};S{M(Oxidation (M))|F}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[AG]P 6.4089;5.6724;5.5162;5.4771;4.7797;4.5791;3.6008;3.129;2.9026;1.4501 -;-;-;-;-;-;-;-;-;- 547 + 1 2.682 114293.0 0.5 1215 3911 5123 HBL1_DMSO_200M_050219_2,5128 HBL1_DMSO_200M_050219_2,5128,AYYNPGNPH True True AYYNPGNPH 25.905427 516.730883777142 1334904.375 5123.0 ENST00000587642.5_1_17:73842817-73843099:-|nuORF;;nc|ENSG00000132471|Q969T9-2|WBP2;;ENSG00000132471|ENST00000254806|WBP2 9.24586264292399 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5130 25.911 82.0 754870.0 25 0 82089.0 + 21197 LPDATSSHRTV 11 57 592.3069723544311 1182.599391775662 2 592.3074218630791 MULTI CID FTMS 0 0 0 5129 813755.4375 1.0 0 0.0 1 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 29.419079586127065 0.4014336600477121 4 {I|L}PDATS{I|L}TTA 10 4 101.6 0.0 0.0 8.591 0.0 0.0 0.0 209.0573366754516 209.0573366754516 90.33747677788288 0.0 0.0 0.0 0 1.110924374808178 1.6989700043360187 1.1382104921644451 0.0 {I|L}PDATS{I|L}TTA 8.591 - 232 + 1 2.673 51102.4 1.0 1216 3912 5129 HBL1_DMSO_200M_050219_2,5130 HBL1_DMSO_200M_050219_2,5130,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5131 25.913 100.0 485360.0 25 0 72982.0 + 8173 EPQKPGSVV 9 82 470.7584974288384 939.5024419244768 2 470.7586547732353 MULTI CID FTMS 0 0 0 5129 388377.25 0.9183547593932598 -2 0.092203140258789 2 Unmodified _EPQKPGSVV_ ENSG00000198824|ENST00000361283|CHAMP1 10.073929032068715 0.563993802247229 4 E[WR]KT 5 7 20.247 0.0 0.0 2.1551 0.0 0.0 0.0 236.1045931451781 236.1045931451781 2.2885593051641706 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3807196863200844 E[WR]KT 2.1551 - 139 + 1 2.673 43706.5 1.0 1217 3912 5129 HBL1_DMSO_200M_050219_2,5131 HBL1_DMSO_200M_050219_2,5131,EPQKPGSVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5133 25.919 178.0 348190.0 25 0 34081.0 + 36470 TAAQVARV 8 102 408.24024829915953 814.4659436651191 2 408.2401306033134 MULTI CID FTMS 0 0 0 5132 224238.890625 0.5845981311974566 -2 0.0595645904541015 1 Unmodified _TAAQVARV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 26.88365393820708 0.4786498634179528 4 [TA]AQVARV 8 0 + 54.405 0.0 0.0 6.6799 6.6799 89.047 0.0 0.0 0.0 38.23446545222369 2.8990693158566927 2.8990693158566927 9.262137858390815 0 0.805462187404089 2.0 0.0 0.3252574989159953 + + [TA]AQVARV;[TA]A[AG]VARV;[TA]V[QA]ARV;{[DA]|[EG]}V[R{I|L}]{[QN]|[E{I|L}]|[KN]} 6.6799;5.5427;3.8805;1.1013 +;-;-;- + 134 + 1 2.673 58479.5 1.0 1218 3913 5132 HBL1_DMSO_200M_050219_2,5133 HBL1_DMSO_200M_050219_2,5133,TAAQVARV False True TAAQVARV 25.919091 408.240130603313 2509756.25 5132.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 3.264922539393107 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5134 25.933 800.0 104290.0 25 0 8408.2 + 5266 DKQWSNRPA 9 97 551.2748642094078 1100.5351754856156 2 551.2756225466728 MULTI CID FTMS 0 0 0 5132 85254.9453125 0.5756805635096246 1 -0.0514659881591796 2 Unmodified _DKQWSNRPA_ REV__ENSG00000143341|ENST00000271588|HMCN1;REV__nc|ENSG00000143341|Q96RW7-2|HMCN1 6.723162845929126 0.6799819581413107 4 [TA]AQ 4 -1 16.065 0.0 0.0 1.4598 0.0 0.0 0.0 726.3321273520628 726.3321273520628 -0.1493197236036536 0.0 -0.1493197236036536 0.0 0 0.0 0.5686362358410126 0.8494850021680094 0.0 [TA]AQ 1.4598 - 97 1 2.673 69335.4 0.6000000238418579 1219 3913 5132 HBL1_DMSO_200M_050219_2,5134 HBL1_DMSO_200M_050219_2,5134,DKQWSNRPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5135 25.937 212.0 627990.0 25 0 70597.0 + 12938 HAFHQPHV 8 126 324.83166073557453 971.4731528069236 3 324.8314391970634 MULTI CID FTMS 0 0 0 5132 415970.8125 0.7909771178127568 -4 0.130126953125 3 Unmodified _HAFHQPHV_ ENSG00000156127|ENST00000286639|BATF;ENST00000555795.1_1_14:75988823-76013011:+|nuORF 38.99230528602208 0.2511498934509823 4 [HA]{M(Oxidation (M))|F}GPYH 7 4 29.914 0.0 0.0 3.0792 0.0 0.0 0.0 159.07729389824092 159.07729389824092 13.716007312821926 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.0 0.0 [HA]{M(Oxidation (M))|F}GPYH 3.0792 - 158 1 2.673 107705.4 1.0 1220 3913 5132 HBL1_DMSO_200M_050219_2,5135 HBL1_DMSO_200M_050219_2,5135,HAFHQPHV False True HAFHQPHV 25.936943 324.831439197063 12626152.0 5132.0 ENST00000555795.1_1_14:75988823-76013011:+|nuORF;;ENSG00000156127|ENST00000286639|BATF 9.825847148895264 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5136 25.951 800.0 122130.0 25 0 11579.0 + 2222 AQDEERQASL 10 130 573.7724939379692 1145.5304349427383 2 573.7727538943291 MULTI CID FTMS 0 0 0 5132 123086.890625 0.7349764832671571 -1 0.007791519165039 4 Unmodified _AQDEERQASL_ ENSG00000184575|ENST00000332707|XPOT 67.08073823543168 0.0190306485248484 4 [QA]D{[SA]|[TG]}{[QG]|[NA]}AQAS{I|L} 12 5 + 57.551 0.0 0.0 5.024 5.024 74.737 0.0 0.0 0.0 15.654883458028088 14.226208160867875 14.226208160867875 3.601514477826377 0 1.3807196863200843 0.8239087409443188 0.3494850021680094 1.1989700043360187 [QA]D{[SA]|[TG]}{[QG]|[NA]}AQAS{I|L};[QA]D{[SA]|[TG]}QQQAS{I|L};[AG]AD{[SA]|[TG]}{[QG]|[NA]}AQAS{I|L};[QA]D{[SA]|[TG]}{NN|[MP]|[D{I|L}]|[EV]}QW{I|L};[AG]AD{[SA]|[TG]}QQQAS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A{[SA]|[TG]}{[QG]|[NA]}AQAS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A{[SA]|[TG]}QQQAS{I|L};[WQ]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP]S{I|L};[AG]DA{[SA]|[TG]}{[QG]|[NA]}AQAS{I|L};[AG]WN{[WN]|[YH]}QAS{I|L} 5.024;4.7096;3.6574;3.4139;3.3403;3.0464;2.732;2.5754;2.5416;2.448 -;-;-;-;-;-;-;-;-;- 567 1 2.673 76135.8 0.5400000214576721 1221 3913 5132 HBL1_DMSO_200M_050219_2,5136 HBL1_DMSO_200M_050219_2,5136,AQDEERQASL True True AQDEERQASL 25.950774 573.772753894329 1078594.125 5132.0 ENSG00000184575|ENST00000332707|XPOT 8.148172537485758 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5137 25.965 800.0 70984.0 25 0 18005.0 -1 0 33 1094.10499967249 3279.29316961767 3 1094.440112292767 MULTI CID FTMS 0 0 0 5132 93917.171875 0.7166591352682867 -4 0.130126953125 5 4 E 1 -1 6.9897 0.0 0.0 0.21315 0.0 0.0 2623.064291981309 524.1619356744749 3147.226227655784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21315 - 6 + 1 2.673 56754.0 0.3400000035762787 1222 3913 5132 HBL1_DMSO_200M_050219_2,5137 HBL1_DMSO_200M_050219_2,5137, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5139 25.969 73.0 631440.0 25 0 38411.0 + 4415 DAVRTKMV 8 76 460.2548573781567 918.4951618231134 2 460.2552673220634 MULTI CID FTMS 0 0 0 5138 661501.9375 0.4781700903496667 3 -0.0998287200927734 1 Unmodified _DAVRTKMV_ ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M 34.40172386719151 0.3279500639400574 4 {[DA]|[EG]}[RV]TKMV 8 0 + 50.424 0.0 0.0 5.4899 5.4899 81.087 0.0 0.0 0.0 7.269987279362624 16.40978057358332 7.269987279362624 7.269987279362624 0 0.8252574989159953 2.0 0.4247425010840047 0.0 + + {[DA]|[EG]}[RV]TKMV;[KT]RVADMV;[KT]N[QA]KMV;[KT]GG[QA]KMV;[KT]R{[CA]|SS}{[QN]|[E{I|L}]|[KN]}V;[KT][KC]V{[QN]|[E{I|L}]|[KN]}V 5.4899;4.6984;3.3124;2.304;1.2431;1.1376 +;-;-;-;-;- + 129 1 2.673 41115.5 1.0 1223 3914 5138 HBL1_DMSO_200M_050219_2,5139 HBL1_DMSO_200M_050219_2,5139,DAVRTKMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5140 25.983 800.0 99486.0 25 0 20133.0 + 25529 NEQIQSNSV 9 104 509.7437306121858 1017.4729082911716 2 509.7435485720634 MULTI CID FTMS 0 0 0 5138 83653.0625 0.0260378638621298 18 -0.3789825439453125 2 Unmodified _NEQIQSNSV_ REV__ENSG00000105287|ENST00000291281|PRKD2;REV__ENST00000597589.5_1_19:47177782-47200527:-|nuORF;REV__ENST00000599019.5_1_19:47177782-47200527:-|nuORF;REV__nc|ENSG00000105287|Q9BZL6-2|PRKD2;REV__nc|ENSG00000105287|Q9BZL6-3|PRKD2 38.17557092003332 0.0854718145212029 4 {[QS]|[NT]}{I|L}DQQ 6 -1 39.052 0.0 0.0 3.8381 0.0 0.0 0.0 315.13023185978415 315.13023185978415 10.718687068606783 0.0 0.0 0.0 0 0.2887254899964357 0.744727494896694 0.4829535345634596 0.3252574989159953 {[QS]|[NT]}{I|L}DQQ 3.8381 - 400 1 2.673 67898.8 0.6299999952316284 1224 3914 5138 HBL1_DMSO_200M_050219_2,5140 HBL1_DMSO_200M_050219_2,5140,NEQIQSNSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5142 26.0 800.0 112570.0 25 0 8692.1 -1 LPYWTPCASP 10 116 596.2784124737698 1190.5422720143397 2 596.2791015505791 MULTI CID FTMS 0 0 0 5141 122483.578125 0.9196073313323716 1 -0.048797607421875 1 Carbamidomethyl (C) _LPYWTPC(Carbamidomethyl (C))ASP_ ENST00000517869.1_1_8:126958414-126963217:-|nuORF 20.453626601364224 0.5043500229302764 4 {I|L}P 2 -1 44.024 0.0 0.0 3.6978 0.0 0.0 0.0 977.3816365192032 977.3816365192032 16.000611038129094 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {I|L}P 3.6978 + + 183 + 1 2.673 70907.6 0.550000011920929 1225 3915 5141 HBL1_DMSO_200M_050219_2,5142 HBL1_DMSO_200M_050219_2,5142,LPYWTPCASP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5143 26.002 120.0 957220.0 25 0 80416.0 + 8162 EPPPVKQV 8 105 447.2580906404142 892.5016283476284 2 447.2582580447197 MULTI CID FTMS 0 0 0 5141 540454.0 0.4853671356029583 -21 0.4685478210449219 2 Unmodified _EPPPVKQV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 30.22481116460888 0.4082965392918993 4 [EP]P[VP]KQV 8 0 + 29.055 0.0 0.0 3.2554 3.2554 76.695 0.0 0.0 0.0 15.232398434412374 0.1368249304540185 0.1368249304540185 9.827796776480469 0 0.2887254899964357 1.5228787452803376 0.0 0.5866968715561641 + + [EP]P[VP]KQV;[EP]V{[HG]|PP}KQV;[EP]P[VP]K[AG]V;[VP]PKQP{NN|[MP]|[D{I|L}]|[EV]};[EP]V{[HG]|PP}K[AG]V;[VP]KPQP{NN|[MP]|[D{I|L}]|[EV]};[VP]KQPP{NN|[MP]|[D{I|L}]|[EV]};{[HG]|PP}VKQP{NN|[MP]|[D{I|L}]|[EV]};[VP]K[WR][HA];[VP]PK[AG]P{NN|[MP]|[D{I|L}]|[EV]} 3.2554;2.1543;1.9869;1.0932;0.88573;0.61595;0.36738;0.20724;0.20141;0.055452 +;-;-;-;-;-;-;-;-;- + 137 + 1 2.673 93834.9 1.0 1226 3915 5141 HBL1_DMSO_200M_050219_2,5143 HBL1_DMSO_200M_050219_2,5143,EPPPVKQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5144 26.008 320.0 261710.0 25 0 19986.0 -1 MAYIEQRRI 9 106 399.2130189202517 1194.6172273609552 3 399.2132140994072 MULTI CID FTMS 0 0 0 5141 144819.359375 0.933094513527216 -5 0.1700191497802734 3 Oxidation (M) _M(Oxidation (M))AYIEQRRI_ ENSG00000186001|ENST00000425562|LRCH3;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3 10.799506525563784 0.5443532743200366 4 {I|L}K[{M(Oxidation (M))|F}T]E 5 -1 26.198 0.0 0.0 2.193 0.0 0.0 0.0 573.2813204400999 573.2813204400999 3.521825181113627 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {I|L}K[{M(Oxidation (M))|F}T]E 2.193 - 87 + 1 2.673 68940.9 1.0 1227 3915 5141 HBL1_DMSO_200M_050219_2,5144 HBL1_DMSO_200M_050219_2,5144,MAYIEQRRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5145 26.022 800.0 70152.0 25 0 7242.6 -1 LFWKRHFCRYK 11 81 547.6249227019198 1639.852938705959 3 547.6246826052666 MULTI CID FTMS 0 0 0 5141 108398.96875 1.0 0 0.0 4 Carbamidomethyl (C) _LFWKRHFC(Carbamidomethyl (C))RYK_ ENST00000489708.1_1_7:33545204-33545258:+|nuORF 10.315234532428624 0.8205777915985574 4 ADANK 5 -1 29.952 0.0 0.0 1.8265 0.0 0.0 1122.6039285514653 0.0 1122.6039285514653 0.0 0.2590146134476079 0.0 0.0 0 1.3182503180159344 0.0 0.0 0.6747425010840047 ADANK 1.8265 - 173 + 1 2.673 49353.5 0.5099999904632568 1228 3915 5141 HBL1_DMSO_200M_050219_2,5145 HBL1_DMSO_200M_050219_2,5145,LFWKRHFCRYK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5146 26.032 590.0 138210.0 25 0 15992.0 24584 MLIAECWMSEV 11 102 437.86327308727306 1310.5679898620192 3 437.8637573122978 MULTI CID FTMS 0 0 0 5141 98230.3359375 0.2746868759814004 -20 0.4646244049072265 5 Unmodified _MLIAECWMSEV_ ENSG00000158125|ENST00000379416|XDH 2.6312355333042263 0.8627335947654684 4 MP 2 10 11.454 0.0 0.0 0.87395 0.0 0.0 1064.4639382036191 0.0 1064.4639382036191 0.0 0.9691001300805624 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 MP 0.87395 - 30 + 1 2.673 68820.5 1.0 1229 3915 5141 HBL1_DMSO_200M_050219_2,5146 HBL1_DMSO_200M_050219_2,5146,MLIAECWMSEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5148 26.037 18.0 2770900.0 25 0 356930.0 + 39295 VADPETRTV 9 51 494.2590283992352 986.5035038652704 2 494.2592040896416 MULTI CID FTMS 0 0 0 5147 3187427.75 0.6402450059757555 4 -0.0874652862548828 1 Unmodified _VADPETRTV_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 24.99096001346401 0.2132109383330889 4 VADPE 5 4 71.013 0.0 0.0 7.1985 0.0 0.0 0.0 472.2531241981764 472.2531241981764 64.02372200412145 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 + VADPE 7.1985 + + 30 + 1 2.673 43703.6 1.0 1230 3916 5147 HBL1_DMSO_200M_050219_2,5148 HBL1_DMSO_200M_050219_2,5148,VADPETRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5149 26.039 112.0 399000.0 25 0 38458.0 + 37039 TGARSPAL 8 84 386.7191298325823 771.4237067319647 2 386.7192870974541 MULTI CID FTMS 0 0 0 5147 369430.90625 0.2291271908474012 5 -0.0956382751464843 2 Unmodified _TGARSPAL_ ENST00000546571.5_1_12:109124172-109124316:-|nuORF 34.40172386719151 0.3279500639400574 4 TG 2 6 35.988 0.0 0.0 4.6651 0.0 0.0 0.0 610.3291109674436 610.3291109674436 6.04371589446238 0.0 0.0 0.0 0 0.555462187404089 1.3979400086720375 0.0 0.0 + TG 4.6651 + + 32 + 1 2.673 40277.4 1.0 1231 3916 5147 HBL1_DMSO_200M_050219_2,5149 HBL1_DMSO_200M_050219_2,5149,TGARSPAL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5150 26.046 374.0 221630.0 25 0 13052.0 + 36713 TDKTEKVAVD 10 107 574.2957379902371 1146.576923047274 2 574.2966796755791 MULTI CID FTMS 0 0 0 5147 165474.84375 0.2069557311611559 -11 0.321136474609375 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))TDKTEKVAVD_ chrX:135779641-135781561|13|36.23|0.53|6.09|-|ENST00000617203|CT45A5,CT45A5;chrX:135781735-135785220|13|147.77|0.31|8.87|-|ENST00000487941|CT45A5,CT45A5;chrX:135881315-135882536|15|139.0|1.0|7.12|-|ENST00000617981|CT45A10,CT45A10;chrX:135885350-135888848|10|46.0|0.05|9.87|-|ENST00000611668|CT45A10,CT45A10;ENSG00000228836|ENST00000698999|CT45A5;ENSG00000268940|ENST00000594565|CT45A1;ENSG00000269096|ENST00000598716|CT45A3;ENSG00000269586|ENST00000682849|CT45A10;ENSG00000270946|ENST00000620704|CT45A9;ENSG00000271449|ENST00000612907|CT45A2;ENSG00000273696|ENST00000610598|CT45A7;ENSG00000278085|ENST00000611660|CT45A8;ENSG00000278289|ENST00000620654|CT45A6 42.83518252547288 0.1276281763412153 4 {[VA]|[{I|L}G]}{[MG]|[TS]}EEKVAVD 11 4 + 60.873 0.0 0.0 5.3091 5.3091 77.129 0.0 0.0 0.0 14.123706090788003 8.437343732377883 8.437343732377883 4.418954370982988 0 1.7376954943324543 1.5228787452803376 1.3609243748081783 0.0 {[VA]|[{I|L}G]}{[MG]|[TS]}EEKVAVD;{[VA]|[{I|L}G]}[WM]EKVAVD;{[VA]|[{I|L}G]}{[MG]|[TS]}EEKAVVD;[MT]AVKE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QP;{[VA]|[{I|L}G]}[WM]EKAVVD;{[QD]|[EN]|[WG]|[KD]|[RS]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EKVAVD;{[VA]|[{I|L}G]}{[MG]|[TS]}VA{[ES]|[DT]|[{I|L}C]}VAVD;{[VA]|[{I|L}G]}[QT]{[C(Carbamidomethyl (C))G]|[NC]}KVAVD;[R{M(Oxidation (M))|F}][PS]EKVAVD;[R{M(Oxidation (M))|F}]VKE[PS]AVD 5.3091;4.9237;4.4369;4.0773;4.0515;4.0404;3.8088;3.7961;3.65;3.6462 -;-;-;-;-;-;-;-;-;- 2290 1 2.673 69352.9 1.0 1232 3916 5147 HBL1_DMSO_200M_050219_2,5150 HBL1_DMSO_200M_050219_2,5150,TDKTEKVAVD True False TDKTEKVAVD 26.045803 574.296679675579 9277638.0 5147.0 ENSG00000269096|ENST00000598716|CT45A3;;ENSG00000271449|ENST00000612907|CT45A2;;ENSG00000268940|ENST00000594565|CT45A1;;chrX:135885350-135888848|10|46.0|0.05|9.87|-|ENST00000611668|CT45A10,CT45A10;;ENSG00000228836|ENST00000698999|CT45A5;;chrX:135881315-135882536|15|139.0|1.0|7.12|-|ENST00000617981|CT45A10,CT45A10;;ENSG00000270946|ENST00000620704|CT45A9;;ENSG00000278289|ENST00000620654|CT45A6;;ENSG00000278085|ENST00000611660|CT45A8;;chrX:135764450-135768108|10|24.9|0.31|6.33|-|0|CT45A3,CT45A3|1;;ENSG00000273696|ENST00000610598|CT45A7;;ENSG00000269586|ENST00000682849|CT45A10;;chrX:135779641-135781561|13|36.23|0.53|6.09|-|ENST00000617203|CT45A5,CT45A5;;chrX:135781735-135785220|13|147.77|0.31|8.87|-|ENST00000487941|CT45A5,CT45A5 8.088818868001303 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5151 26.06 800.0 156990.0 25 0 32976.0 + 4320 DARQKFRSV 9 96 553.8078938349142 1105.6012347366284 2 553.8079711794853 MULTI CID FTMS 0 0 0 5147 153656.65625 0.3362792282436053 3 -0.0749416351318359 4 Unmodified _DARQKFRSV_ ENSG00000131370|ENST00000383791|SH3BP5;ENST00000426925.5_1_3:15314864-15374612:-|nuORF 12.872603262515298 0.4882369880199512 4 MPPE 4 9 42.396 0.0 0.0 3.8346 0.0 0.0 0.0 648.3965548150999 648.3965548150999 5.457574905606748 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 MPPE 3.8346 - 63 + 1 2.673 101755.3 0.6100000143051147 1233 3916 5147 HBL1_DMSO_200M_050219_2,5151 HBL1_DMSO_200M_050219_2,5151,DARQKFRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5152 26.064 257.0 377520.0 25 0 42597.0 + 41811 VPVVRVINP 9 93 331.5471358987418 991.6195782964252 3 331.8807861208916 MULTI CID FTMS 0 0 0 5147 146445.65625 1.0 0 0.0 5 Unmodified _VPVVRVINP_ REV__ENSG00000143627|ENST00000342741|PKLR;REV__nc|ENSG00000143627|P30613-2|PKLR 16.149105407346934 0.3995459350917656 4 VPVPPK 6 -1 49.456 0.0 0.0 4.9874 0.0 0.0 0.0 371.20652185611567 371.20652185611567 39.27448615485645 0.0 0.0 0.0 0 0.4929928190999391 2.0 0.0 0.0 VPVPPK 4.9874 - 28 + 1 2.673 83828.7 1.0 1234 3916 5147 HBL1_DMSO_200M_050219_2,5152 HBL1_DMSO_200M_050219_2,5152,VPVVRVINP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5154 26.082 800.0 119950.0 25 0 10037.0 -1 GEYQCIVS 8 110 478.2143670906927 954.4141812481854 2 478.2146789431572 MULTI CID FTMS 0 0 0 5153 129541.9921875 0.9414338722529074 1 -0.0364856719970703 1 Carbamidomethyl (C) _GEYQC(Carbamidomethyl (C))IVS_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 15.847184025352805 0.6768015514314958 4 {[DA]|[EG]}{I|L}KT 5 -1 48.372 0.0 0.0 5.0682 0.0 0.0 0.0 423.1016329401001 423.1016329401001 33.15507572486226 0.0 0.0 0.0 0 1.610924374808178 2.0 0.0 0.0 {[DA]|[EG]}{I|L}KT 5.0682 - 150 + 1 2.671 76341.5 0.5699999928474426 1235 3917 5153 HBL1_DMSO_200M_050219_2,5154 HBL1_DMSO_200M_050219_2,5154,GEYQCIVS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5155 26.087 268.0 204130.0 25 0 11154.0 + 30297 QYQEARETY 9 90 594.2700241104438 1186.5254952876876 2 594.2702514529228 MULTI CID FTMS 0 0 0 5153 185709.90625 0.86308043034952 2 -0.0424690246582031 2 Unmodified _QYQEARETY_ ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6 55.50274090549119 0.0285720310785888 4 QYQEA{[RE]|[WV]}TY 9 0 + 71.001 0.0 0.0 5.984 5.984 85.615 0.0 0.0 0.0 40.83134222585434 9.129712596891151 9.129712596891151 9.208187539523747 0 0.7887254899964358 1.5228787452803376 0.805462187404089 0.4247425010840047 + + QYQEA{[RE]|[WV]}TY;QY[AG]EA{[RE]|[WV]}TY;QYQ[MN][Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]};QYQEA[Y{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ][Y{I|L}]AEHTY;[YQ]QCARQQY;QY[AG]EA[Y{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{[NV]|[RG]}[MN]QQY;[YQ]QCAR[AG]QY;[YQ]QCARQ[AG]Y 5.984;5.2079;4.8342;4.5898;3.6846;3.4651;3.4557;2.7164;2.689;2.689 +;-;-;-;-;-;-;-;-;- + 257 + 1 2.671 48817.0 1.0 1236 3917 5153 HBL1_DMSO_200M_050219_2,5155 HBL1_DMSO_200M_050219_2,5155,QYQEARETY True True QYQEARETY 26.087051 594.270251452923 1521484.375 5153.0 nc|ENSG00000163029|Q96SB8-2|SMC6;;ENSG00000163029|ENST00000448223|SMC6 7.341219584147136 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5156 26.101 800.0 146070.0 25 0 12380.0 -1 0 78 628.785012212642 2511.110942984168 4 629.0370971560478 MULTI CID FTMS 0 0 0 5153 108870.46875 0.5752957492478034 -9 0.2854232788085937 3 4 DD 2 -1 24.464 0.0 0.0 0.97423 0.0 0.0 728.3348864144383 1549.6945553486555 2278.029441763094 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.0 DD 0.97423 - 43 + 1 2.671 91746.3 0.5 1237 3917 5153 HBL1_DMSO_200M_050219_2,5156 HBL1_DMSO_200M_050219_2,5156, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5158 26.106 26.0 1878500.0 25 0 319990.0 + 10965 GAPEGGKRSDL 11 65 543.7805663450163 1085.5465797568324 2 543.7808715701103 MULTI CID FTMS 0 0 0 5157 2177065.25 0.9275308862362291 -1 0.0364856719970703 1 Unmodified _GAPEGGKRSDL_ REV__nc|ENSG00000133475|P36268-2|GGT2P;REV__nc|ENSG00000133475|P36268-3|GGT2P;REV__nc|ENSG00000133475|P36268|GGT2P 12.240655878213236 0.7805268987462184 4 [QP]QDT[WK]A{I|L} 9 -1 [QP] + + 36.458 4.705 2.0901 3.3585 3.3585 46.799 0.0 0.0 0.0 0.0 26.22486274231747 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 [QP]QDT[WK]A{I|L} 3.3585 - 56 + 1 2.671 43758.7 1.0 1238 3918 5157 HBL1_DMSO_200M_050219_2,5158 HBL1_DMSO_200M_050219_2,5158,GAPEGGKRSDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5159 26.107 43.0 1144300.0 25 0 117560.0 + 21193 LPDATSSHRTV 11 77 395.2070450298864 1182.5993056898592 3 395.2069274783134 MULTI CID FTMS 0 0 0 5157 1052658.375 0.3004850426278452 6 -0.0600299835205078 2 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 25.43794494586266 0.4949119292975719 4 {I|L}PDATSSHRS{I|L} 11 2 + 82.939 0.0 0.0 7.0133 7.0133 93.89 0.0 0.0 0.0 51.21192656705813 5.594410749814614 5.594410749814614 28.84821100680857 0 0.274227503252014 1.3010299956639813 0.8494850021680094 0.0 {I|L}PDATSSHRS{I|L};{I|L}PW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}HRS{I|L} 7.0133;4.5739 -;- 178 + 1 2.671 47388.0 1.0 1239 3918 5157 HBL1_DMSO_200M_050219_2,5159 HBL1_DMSO_200M_050219_2,5159,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5161 26.112 63.0 646810.0 25 0 93952.0 + -1 DAYMIASDCR 10 55 609.2496934581197 1216.4848339830394 2 609.2501708865166 MULTI CID FTMS 0 0 0 5160 705146.25 0.7426135642224543 3 -0.0452194213867187 1 Carbamidomethyl (C),Oxidation (M) _DAYM(Oxidation (M))IASDC(Carbamidomethyl (C))R_ REV__ENSG00000166704|ENST00000551380|ZNF606 13.042465956692816 0.6287021003332052 4 {[DA]|[EG]}YQTVW{I|L} 8 -1 70.182 0.0 0.0 5.7693 0.0 0.0 0.0 237.00090967349848 237.00090967349848 58.923312250720095 0.0 0.0 0.0 0 1.6677353201839438 1.6989700043360187 0.7302046884880937 0.3807196863200844 {[DA]|[EG]}YQTVW{I|L} 5.7693 - 70 + 1 2.671 37420.3 1.0 1240 3919 5160 HBL1_DMSO_200M_050219_2,5161 HBL1_DMSO_200M_050219_2,5161,DAYMIASDCR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5162 26.113 80.0 957510.0 25 0 154750.0 + -1 YVEDGKGIRRV 11 57 430.0870886215216 429.0798121549216 1 430.8882324099541 MULTI CID FTMS 0 0 0 5160 8846.6962890625 0.3217055183028753 -4 0.1237392425537109 2 nc|ENSG00000126391|Q9BZ67-3|FRMD8;ENSG00000126391|ENST00000317568|FRMD8;nc|ENSG00000126391|Q9BZ67-2|FRMD8;ENST00000440433.1_1_X:64770780-64771062:-|nuORF 4 Y 1 -1 12.764 0.0 0.0 2.9748 0.0 0.0 248.005866087342 0.0 248.005866087342 0.0 8.784809756568528 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.9748 - 9 + 1 2.671 65254.0 1.0 1241 3919 5160 HBL1_DMSO_200M_050219_2,5162 HBL1_DMSO_200M_050219_2,5162, False False YVEDGKGIRRV 26.113471 430.888232409954 2348560.0 5160.0 nc|ENSG00000126391|Q9BZ67-3|FRMD8;;ENSG00000126391|ENST00000317568|FRMD8;;nc|ENSG00000126391|Q9BZ67-2|FRMD8;;ENST00000440433.1_1_X:64770780-64771062:-|nuORF 3.9202998081843057 3.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5163 26.116 129.0 454870.0 25 0 71082.0 + 7091 EELVGGRG 8 81 408.7142882866397 815.4140236400794 2 408.7141906619072 MULTI CID FTMS 0 0 0 5160 360279.03125 0.4445954461175846 -10 0.3238906860351562 3 Unmodified _EELVGGRG_ REV__ENST00000222990.7_1_7:2293201-2294050:-|nuORF 24.67388899826682 0.525179942228231 4 EE{I|L}GN[RV] 7 -1 + 45.546 0.0 0.0 5.5856 5.5856 81.007 0.0 0.0 0.0 23.09849149557841 3.282957030980711 3.282957030980711 6.699492111829969 0 0.3494850021680094 2.0 0.0 0.3054621874040891 EE{I|L}GN[RV];EENVA[RV];EEVAN[RV];EE{I|L}GGG[RV];EEVNA[RV];EEGGVA[RV];EEVAGG[RV];EEVGGA[RV];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QVA[RV];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}AN[RV] 5.5856;4.764;4.4726;4.4413;4.2567;3.6197;3.3284;3.1124;1.2975;1.0062 -;-;-;-;-;-;-;-;-;- 173 + 1 2.671 54974.6 1.0 1242 3919 5160 HBL1_DMSO_200M_050219_2,5163 HBL1_DMSO_200M_050219_2,5163,EELVGGRG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5164 26.119 169.0 308860.0 25 0 34516.0 + 17676 KPTGARPSAL 10 68 499.2932858985664 996.5720188639328 2 499.2932922244072 MULTI CID FTMS 0 0 0 5160 263744.84375 0.5876215927028783 -18 0.4408340454101562 4 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 23.78978130925829 0.4341852049148378 4 KPTQR{[TV]|[{I|L}S]}[PA] 9 4 + 44.983 0.0 0.0 4.5138 4.5138 79.557 0.0 0.0 0.0 34.79364375124895 0.4305997461732147 0.4305997461732147 9.208187539523747 0 0.805462187404089 0.0 0.805462187404089 0.0 KPTQR{[TV]|[{I|L}S]}[PA];KPT[AG]R{[TV]|[{I|L}S]}[PA];[VS]{[TV]|[{I|L}S]}R[NP]PK;[{I|L}A]AAQR{[TV]|[{I|L}S]}[PA] 4.5138;3.5898;0.53705;0.09183 -;-;-;- 230 + 1 2.671 46004.7 1.0 1243 3919 5160 HBL1_DMSO_200M_050219_2,5164 HBL1_DMSO_200M_050219_2,5164,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5166 26.128 309.0 190960.0 25 0 32865.0 45358 YSQSFIVS 8 84 465.7334463064655 929.4523396797308 2 465.7342712283134 MULTI CID FTMS 0 0 0 5165 145032.75 0.5169388447956459 -8 0.2140789031982422 1 Unmodified _YSQSFIVS_ ENSG00000164535|ENST00000297056|DAGLB;ENST00000462934.5_1_7:6449470-6461666:-|nuORF;ENST00000497308.1_1_7:6452282-6456334:-|nuORF;nc|ENSG00000164535|Q8NCG7-2|DAGLB;nc|ENSG00000164535|Q8NCG7-4|DAGLB 14.838274106304384 0.6917062315640577 4 {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}ATT{I|L}K 8 6 + 37.401 0.0 0.0 4.024 4.024 82.509 0.0 0.0 0.0 26.80492757325661 16.326221184865943 16.326221184865943 37.40085961185265 0 0.3494850021680094 0.0 0.0 0.2302046884880938 {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}ATT{I|L}K 4.024 - 80 + 1 2.671 54048.2 1.0 1244 3920 5165 HBL1_DMSO_200M_050219_2,5166 HBL1_DMSO_200M_050219_2,5166,YSQSFIVS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5168 26.14 554.0 134650.0 25 0 31790.0 24753 MPFPAGTK 8 107 424.72189701363743 847.4292410940749 2 424.7216369509697 MULTI CID FTMS 0 0 0 5167 124818.0703125 0.4761352619169466 7 -0.1126346588134765 1 Unmodified _MPFPAGTK_ ENSG00000100578|ENST00000652326|KIAA0586;ENST00000538571.6_1_14:58909433-59003756:+|nuORF;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-3|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586 11.640296217721598 0.738950129755968 4 DTTQTK 6 6 49.894 0.0 0.0 5.8877 0.0 0.0 155.09603990171087 0.0 155.09603990171087 0.0 38.66201017287738 0.0 0.0 0 0.7742275032520141 0.0 1.0941876774005248 0.6595680409956017 DTTQTK 5.8877 - 130 + 1 2.671 64876.8 1.0 1245 3921 5167 HBL1_DMSO_200M_050219_2,5168 HBL1_DMSO_200M_050219_2,5168,MPFPAGTK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5169 26.152 708.0 230270.0 25 0 21155.0 -1 0 74 503.229507477043 2511.111155052215 5 503.6305114626884 MULTI CID FTMS 0 0 0 5167 98467.3828125 0.702733909266448 -9 0.2222518920898437 2 4 {[TV]|[{I|L}S]}[DP][C(Carbamidomethyl (C))R]D 7 -1 18.318 0.0 0.0 0.72946 0.0 0.0 0.0 1664.7229976819888 1664.7229976819888 4.505369237630175 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.2614393726401688 0.0 {[TV]|[{I|L}S]}[DP][C(Carbamidomethyl (C))R]D 0.72946 - 101 1 2.671 131383.2 1.0 1246 3921 5167 HBL1_DMSO_200M_050219_2,5169 HBL1_DMSO_200M_050219_2,5169, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5172 26.161 108.0 691190.0 25 0 56612.0 28670 PVPGPSVPKI 10 96 330.8708982881832 989.5908654647496 3 330.8708679080009 MULTI CID FTMS 0 0 0 5171 270154.0625 0.332903270426621 -7 0.1241683959960937 1 Unmodified _PVPGPSVPKI_ nc|ENSG00000172534|P51610-4|HCFC1 10.315234532428624 0.6744623947628824 4 {I|L} 1 9 15.596 0.0 0.0 1.576 0.0 0.0 858.4961216676778 0.0 858.4961216676778 0.0 2.40834441235192 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L} 1.576 + + 89 + 1 2.671 66719.6 1.0 1247 3923 5171 HBL1_DMSO_200M_050219_2,5172 HBL1_DMSO_200M_050219_2,5172,PVPGPSVPKI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 5174 26.166 116.0 401630.0 25 0 55580.0 + 1111 AGPQVGLAEV 10 72 470.7584974288384 939.5024419244768 2 470.7587768435478 MULTI CID FTMS 0 0 0 5173 326693.4375 0.7724975476567422 10 -0.2301845550537109 1 Unmodified _AGPQVGLAEV_ REV__ENST00000467116.5_1_10:104158558-104158636:+|nuORF 10.823927491677226 0.6659270209832991 4 TV 2 -1 16.203 0.0 0.0 1.7246 0.0 0.0 721.3753342358034 0.0 721.3753342358034 0.0 4.436726795685342 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 TV 1.7246 - 92 + 1 2.671 43497.7 1.0 1248 3924 5173 HBL1_DMSO_200M_050219_2,5174 HBL1_DMSO_200M_050219_2,5174,AGPQVGLAEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5175 26.172 344.0 161230.0 25 0 13112.0 2447 AQVAAQNAV 9 95 436.2351539053705 870.455754877541 2 436.2346984744072 MULTI CID FTMS 0 0 0 5173 177197.953125 0.9665084521462084 -2 0.0088272094726562 2 Unmodified _AQVAAQNAV_ ENSG00000104973|ENST00000312865|MED25;nc|ENSG00000104973|Q71SY5-4|MED25;nc|ENSG00000104973|Q71SY5-5|MED25;nc|ENSG00000104973|Q71SY5-6|MED25 39.957323273325 0.0756908302845263 4 [QA]VAAQN{[VA]|[{I|L}G]} 9 0 + 29.204 0.0 0.0 3.355 3.355 69.172 0.0 0.0 0.0 3.7635488091763456 7.147642715192507 3.7635488091763456 3.7635488091763456 0 0.0 0.0 0.0 0.6861818737241735 + + [QA]VAAQN{[VA]|[{I|L}G]};{[QG]|[NA]}{I|L}AAQN{[VA]|[{I|L}G]};[QA]Q{I|L}QN{[VA]|[{I|L}G]};[AG]AVAAQN{[VA]|[{I|L}G]};[QA]AVAQN{[VA]|[{I|L}G]};[AG]AQ{I|L}QN{[VA]|[{I|L}G]};[QA]AG{I|L}QN{[VA]|[{I|L}G]};[QA]VAA[AG]N{[VA]|[{I|L}G]};[QA]VAAQGG{[VA]|[{I|L}G]};[QA]NAA{I|L}N{[VA]|[{I|L}G]} 3.355;2.9226;2.8131;2.6921;2.552;2.4949;2.4085;2.2971;2.2971;2.2816 +;-;-;-;-;-;-;-;-;- + 918 1 2.671 45714.0 1.0 1249 3924 5173 HBL1_DMSO_200M_050219_2,5175 HBL1_DMSO_200M_050219_2,5175,AQVAAQNAV True True GAAAGGALAAAA 26.172267 436.234698474407 1691617.5 5173.0 ENSG00000112406|ENST00000367658|HECA -0.5557351658741633 2.0 False 12.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5176 26.186 800.0 128490.0 25 0 12362.0 + 44877 YPPHVQKV 8 123 484.27136887568406 0 484.2715331912041 PEAK CID FTMS 0 0 0 5173 84399.1796875 0.4979572546889525 -21 0.461883544921875 3 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 36.04419817259434 0.1760516939127867 4 PP 2 6 12.959 0.0 0.0 1.3408 0.0 0.0 163.0621141396668 606.3371676080686 769.3992817477354 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + PP 1.3408 + + 90 + 1 2.671 84106.9 0.449999988079071 1250 3924 5173 HBL1_DMSO_200M_050219_2,5176 HBL1_DMSO_200M_050219_2,5176,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5178 26.192 204.0 593320.0 25 0 60531.0 + 12939 HAFHQPHV 8 121 324.83166073557453 971.4731528069236 3 324.8314391970634 MULTI CID FTMS 0 0 0 5177 314730.15625 0.5984659125077041 8 -0.1732730865478515 1 Unmodified _HAFHQPHV_ ENSG00000156127|ENST00000286639|BATF;ENST00000555795.1_1_14:75988823-76013011:+|nuORF 38.99230528602208 0.2511498934509823 4 [HA]{M(Oxidation (M))|F}GPYH 7 4 27.004 0.0 0.0 2.7797 0.0 0.0 0.0 159.07659774759148 159.07659774759148 12.58437645810783 0.0 0.0 0.0 0 0.2302046884880938 1.2218487496163564 0.0 0.0 [HA]{M(Oxidation (M))|F}GPYH 2.7797 - 179 1 2.671 99701.9 1.0 1251 3925 5177 HBL1_DMSO_200M_050219_2,5178 HBL1_DMSO_200M_050219_2,5178,HAFHQPHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5181 26.213 800.0 32951.0 25 0 7797.6 -1 0 28 1094.10499967249 3279.29316961767 3 1094.774218738079 MULTI CID FTMS 0 0 0 5180 66823.8125 0.4503303197056711 10 -0.2422523498535156 1 4 G{M(Oxidation (M))|F} 2 -1 10.969 0.0 0.0 0.3345 0.0 0.0 1943.6761785061456 1128.517446482579 3072.193624988725 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 0.3345 - 3 + 1 2.671 35086.3 0.4199999868869781 1252 3927 5180 HBL1_DMSO_200M_050219_2,5181 HBL1_DMSO_200M_050219_2,5181, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5182 26.227 800.0 143270.0 25 0 17133.0 + 24443 MGYVHRSV 8 121 474.7396861768068 947.4648194204136 2 474.7399474978447 MULTI CID FTMS 0 0 0 5180 96534.953125 0.2202017637990782 -6 0.0688419342041015 2 Unmodified _MGYVHRSV_ ENSG00000266173|ENST00000336174|STRADA;nc|ENSG00000266173|Q7RTN6-2|STRADA;nc|ENSG00000266173|Q7RTN6-3|STRADA;nc|ENSG00000266173|Q7RTN6-4|STRADA;nc|ENSG00000266173|Q7RTN6-5|STRADA;nc|ENSG00000266173|Q7RTN6-6|STRADA 17.44264345198275 0.6532317440885087 4 MGYVHRSV 8 0 + 56.179 0.0 0.0 5.9294 5.9294 73.559 0.0 0.0 0.0 26.40978057358332 0.993846321359122 0.993846321359122 0.993846321359122 0 1.0 1.0 0.2215141619232908 0.0 + + MGYVHRSV;MGYVHRVS;MGYVHVRS;MGYVVHRS;MG[R{M(Oxidation (M))|F}]{[HG]|PP}{M(Oxidation (M))|F}P;{[MG]|[TS]}[{I|L}P]VV[W{M(Oxidation (M))|F}];MV[YG]HRSV;MV[YG]HRVS;MV[YG]HVRS;VM[YG]HRSV 5.9294;5.8245;5.7933;5.3733;2.19;2.0756;1.8395;1.7346;1.7033;1.6389 +;-;-;-;-;-;-;-;-;- + 307 + 1 2.671 94915.7 0.5799999833106995 1253 3927 5180 HBL1_DMSO_200M_050219_2,5182 HBL1_DMSO_200M_050219_2,5182,MGYVHRSV False True MGYVHRSV 26.226642 474.739947497845 4438692.0 5180.0 nc|ENSG00000266173|Q7RTN6-2|STRADA;;nc|ENSG00000266173|Q7RTN6-6|STRADA;;nc|ENSG00000266173|Q7RTN6-4|STRADA;;nc|ENSG00000266173|Q7RTN6-3|STRADA;;ENSG00000266173|ENST00000336174|STRADA;;nc|ENSG00000266173|Q7RTN6-5|STRADA 7.694073677062988 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5183 26.24 800.0 159420.0 25 0 8338.8 + 36394 SYQRSMHAY 9 151 381.5063464995454 1141.497210098836 3 381.5066100955009 MULTI CID FTMS 0 0 0 5180 81254.8515625 0.6958665851837708 -1 0.0039501190185546 3 Unmodified _SYQRSMHAY_ ENSG00000139437|ENST00000405876|TCHP;ENST00000537218.1_1_12:110338138-110342619:+|nuORF 16.565877749689598 0.3882643987948875 4 SY[EP]A{[NV]|[RG]}EAY 10 6 + 54.398 0.0 0.0 4.7655 4.7655 73.068 0.0 0.0 0.0 36.53212513775343 3.225538824269848 3.225538824269848 3.225538824269848 0 0.1271595765414318 2.0 0.3807196863200844 0.4247425010840047 SY[EP]A{[NV]|[RG]}EAY;SY[EP]A{[NV]|[RG]}ES{M(Oxidation (M))|F};SY[EP]{[{M(Oxidation (M))|F}H]|[RQ]}EAY;SY[EP]{[{M(Oxidation (M))|F}H]|[RQ]}ES{M(Oxidation (M))|F};SYY[EP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QP;SY[EP]Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QP;SYQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QP;SYQ[Q{I|L}][C(Carbamidomethyl (C))Q]C{I|L};SY[EP]AWWG{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[KQ]H[WY] 4.7655;4.4829;4.2777;3.9951;2.941;2.8913;2.5689;2.4003;1.9406;1.0507 -;-;-;-;-;-;-;-;-;- 354 + 1 2.671 102077.4 0.4799999892711639 1254 3927 5180 HBL1_DMSO_200M_050219_2,5183 HBL1_DMSO_200M_050219_2,5183,SYQRSMHAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5186 26.26 800.0 134990.0 25 0 12441.0 18123 KTLKWMPK 8 124 516.3080466971014 1030.6015404610027 2 516.3079711794853 MULTI CID FTMS 0 0 0 5185 102197.296875 0.5726590449610703 -1 0.0038986206054687 1 Unmodified _KTLKWMPK_ ENST00000581786.5_1_17:30349314-30355958:+|nuORF 24.020572477871973 0.5389365498350341 4 KT{I|L}QTE{I|L}AK 9 5 + 76.358 0.0 0.0 7.4091 7.4091 90.549 0.0 0.0 0.0 63.59423162140049 16.35512976221092 16.35512976221092 9.208187539523747 0 2.0994850021680094 0.0 0.4247425010840047 0.6694451763165201 KT{I|L}QTE{I|L}AK;KT{I|L}[AG]TE{I|L}AK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RV][KG]{I|L}AK;[KA][C(Carbamidomethyl (C))R][KG]{I|L}AK 7.4091;6.5156;2.1221;1.9006 -;-;-;- 295 + 1 2.671 88201.5 0.6700000166893005 1255 3929 5185 HBL1_DMSO_200M_050219_2,5186 HBL1_DMSO_200M_050219_2,5186,KTLKWMPK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5187 26.262 77.0 814000.0 25 0 190680.0 + 36464 TAAKPAASI 9 76 415.2425370038571 828.4705210745142 2 415.2424499392509 MULTI CID FTMS 0 0 0 5185 500989.5 0.0906572653775633 -8 0.1165332794189453 2 Unmodified _TAAKPAASI_ ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207 26.88365393820708 0.1891292719743517 4 [TA][PG]A 5 5 28.2 0.0 0.0 3.4038 0.0 0.0 0.0 428.2539432759392 428.2539432759392 8.749387366082999 0.0 0.0 0.0 0 0.5 2.0 0.2742275032520141 0.0 [TA][PG]A 3.4038 - 64 1 2.671 59179.0 1.0 1256 3929 5185 HBL1_DMSO_200M_050219_2,5187 HBL1_DMSO_200M_050219_2,5187,TAAKPAASI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5188 26.266 222.0 622330.0 25 0 63652.0 + 44869 YPPHVQKV 8 136 323.1838573595554 966.5297426788665 3 323.1847411990166 MULTI CID FTMS 0 0 0 5185 235926.125 0.6155327015679393 -7 0.092010498046875 3 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 15.847184025352805 0.6768015514314958 4 YPPHVQKV 8 0 + 47.899 0.0 0.0 4.9558 4.9558 72.152 0.0 0.0 0.0 26.867355479190067 2.4864192620429293 2.4864192620429293 2.4864192620429293 0 0.0 1.0457574905606752 0.0 0.0 + + YPPHVQKV;YPPHVQVK;YPPVHQKV;YPPVHQVK;YPVPHQKV;YPPHV[AG]KV;YPVPHQVK;YPPHV[AG]VK;YP[WK]{M(Oxidation (M))|F}KV;YPPVH[AG]KV 4.9558;4.6986;4.5441;4.2868;4.0505;3.9975;3.7932;3.7403;3.6987;3.5858 +;-;-;-;-;-;-;-;-;- + 286 + 1 2.671 112462.1 1.0 1257 3929 5185 HBL1_DMSO_200M_050219_2,5188 HBL1_DMSO_200M_050219_2,5188,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5189 26.28 800.0 174640.0 25 0 9082.0 + 28904 QAPPPPQQV 9 161 481.2586875982422 960.5028222632844 2 481.2586852908134 MULTI CID FTMS 0 0 0 5185 111649.59375 0.0189079935632992 -17 0.338785171508789 4 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 81.89019881105858 0.0170587746866453 4 [QA]PPPPGAQV 10 2 + 74.342 0.0 0.0 7.7399 7.7399 83.337 0.0 0.0 0.0 9.39780420734732 7.754537344402905 7.754537344402905 3.0102999566398125 0 2.2128493362984765 2.0 0.0 0.8391368308784533 [QA]PPPPGAQV;[QA]PPPGPAQV;[QA]PPPPQQV;[QA]PPGPPAQV;[QA]PPPPQVQ;[QA]PGPPPAQV;[AG]APPPPGAQV;[AG]PAPPPGAQV;[AG]PPAPPGAQV;[AG]APPPGPAQV 7.7399;7.4265;7.0599;6.8636;6.0046;5.7488;5.7473;5.5934;5.4646;5.4339 -;-;+;-;-;-;-;-;-;- + 1631 1 2.671 107520.5 0.699999988079071 1258 3929 5185 HBL1_DMSO_200M_050219_2,5189 HBL1_DMSO_200M_050219_2,5189,QAPPPPQQV True True QAPPPPQQV 26.280245 481.258685290813 1254288288.0 5185.0 nc|ENSG00000198815|Q9UPW0-2|FOXJ3;;ENSG00000198815|ENST00000361346|FOXJ3 9.246584256490072 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5191 26.285 62.0 1094600.0 25 0 80539.0 + 8163 EPPPVKQV 8 86 447.2580906404142 892.5016283476284 2 447.2581664919853 MULTI CID FTMS 0 0 0 5190 998182.3125 0.8964405663158419 -6 0.1189537048339843 1 Unmodified _EPPPVKQV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 56.541270873467816 0.1144128637334507 4 [EP]P[VP]KQV 8 0 + 38.508 0.0 0.0 4.3147 4.3147 80.659 0.0 0.0 0.0 26.289938300073324 10.520016552945826 10.520016552945826 11.762137858390815 0 0.2302046884880938 1.5228787452803376 0.0 1.055462187404089 + + [EP]P[VP]KQV;[EP]P[VP]K[AG]V;[EP]{I|L}{I|L}[{I|L}T][HA];{[QD]|[EN]|[WG]|[KD]|[RS]}[Y{I|L}]KQV;{[QD]|[EN]|[WG]|[KD]|[RS]}{NN|[MP]|[D{I|L}]|[EV]}K{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.3147;2.9968;0.82261;0.39248;0.2761 +;-;-;-;- + 91 + 1 2.671 60690.5 1.0 1259 3930 5190 HBL1_DMSO_200M_050219_2,5191 HBL1_DMSO_200M_050219_2,5191,EPPPVKQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5192 26.294 545.0 178210.0 25 0 22250.0 24585 MLIAECWMSEV 11 97 437.86327308727306 1310.5679898620192 3 437.8636962771416 MULTI CID FTMS 0 0 0 5190 186772.6875 0.5222827099020411 -5 0.0938167572021484 2 Unmodified _MLIAECWMSEV_ ENSG00000158125|ENST00000379416|XDH 4.406150317652783 0.8543594311449257 4 SPM 3 10 21.031 0.0 0.0 1.6047 0.0 0.0 977.4346515259864 0.0 977.4346515259864 0.0 9.041068762088996 0.0 0.0 0 0.5 0.0 0.0 0.0 SPM 1.6047 - 34 1 2.671 79401.7 1.0 1260 3930 5190 HBL1_DMSO_200M_050219_2,5192 HBL1_DMSO_200M_050219_2,5192,MLIAECWMSEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5193 26.296 73.0 986540.0 25 0 74141.0 + 24445 MGYVHRSV 8 78 316.82878620746163 0 316.8288452029228 PEAK CID FTMS 0 0 0 5190 799461.875 0.7024953063145324 -4 0.087411880493164 3 Unmodified _MGYVHRSV_ ENSG00000266173|ENST00000336174|STRADA;nc|ENSG00000266173|Q7RTN6-2|STRADA;nc|ENSG00000266173|Q7RTN6-3|STRADA;nc|ENSG00000266173|Q7RTN6-4|STRADA;nc|ENSG00000266173|Q7RTN6-5|STRADA;nc|ENSG00000266173|Q7RTN6-6|STRADA 15.248480904072842 0.4825600911836237 4 G 1 7 5.4846 0.0 0.0 0.8683 0.0 0.0 439.5525023692217 132.0460146539672 571.598517023189 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 0.8683 + + 13 + 1 2.671 68710.0 1.0 1261 3930 5190 HBL1_DMSO_200M_050219_2,5193 HBL1_DMSO_200M_050219_2,5193,MGYVHRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5194 26.303 408.0 227810.0 25 0 23930.0 + 8096 EPFKTKKI 8 110 495.8029268529648 989.5913007727296 2 495.8029052615166 MULTI CID FTMS 0 0 0 5190 214338.796875 1.0 0 0.0 4 Unmodified _EPFKTKKI_ ENSG00000109805|ENST00000251496|NCAPG 36.506200033944 0.2927422953263032 4 KTKK{I|L} 5 3 22.005 0.0 0.0 2.2236 0.0 0.0 373.1635186455797 0.0 373.1635186455797 0.0 -0.3961544268799066 -0.3961544268799066 0.0 0 0.4247425010840047 0.0 0.0 0.2887254899964357 + KTKK{I|L} 2.2236 + + 274 + 1 2.671 74717.2 1.0 1262 3930 5190 HBL1_DMSO_200M_050219_2,5194 HBL1_DMSO_200M_050219_2,5194,EPFKTKKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5195 26.317 800.0 187170.0 25 0 18631.0 17724 KPVGFTVHAI 10 129 534.8117276899189 1067.6089024466378 2 534.8115112185478 MULTI CID FTMS 0 0 0 5190 87875.296875 0.1373172202634997 -7 0.1237735748291015 5 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 34.40172386719151 0.2166836008404837 4 KPTGAR 6 6 58.039 0.0 0.0 5.4364 0.0 0.0 0.0 454.2316683404906 454.2316683404906 9.837877473810003 0.0 0.0 0.0 0 1.305462187404089 0.0 0.7059771852360797 0.3054621874040891 KPTGAR 5.4364 - 929 + 1 2.671 119230.3 0.4699999988079071 1263 3930 5190 HBL1_DMSO_200M_050219_2,5195 HBL1_DMSO_200M_050219_2,5195,KPVGFTVHAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5197 26.325 253.0 203530.0 25 0 14474.0 -1 TDKTEKVAVD 10 76 574.2957379902371 1146.576923047274 2 574.2961913943291 MULTI CID FTMS 0 0 0 5196 344945.0 0.4314150904607513 4 -0.0981788635253906 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))TDKTEKVAVD_ chrX:135779641-135781561|13|36.23|0.53|6.09|-|ENST00000617203|CT45A5,CT45A5;chrX:135781735-135785220|13|147.77|0.31|8.87|-|ENST00000487941|CT45A5,CT45A5;chrX:135881315-135882536|15|139.0|1.0|7.12|-|ENST00000617981|CT45A10,CT45A10;chrX:135885350-135888848|10|46.0|0.05|9.87|-|ENST00000611668|CT45A10,CT45A10;ENSG00000228836|ENST00000698999|CT45A5;ENSG00000268940|ENST00000594565|CT45A1;ENSG00000269096|ENST00000598716|CT45A3;ENSG00000269586|ENST00000682849|CT45A10;ENSG00000270946|ENST00000620704|CT45A9;ENSG00000271449|ENST00000612907|CT45A2;ENSG00000273696|ENST00000610598|CT45A7;ENSG00000278085|ENST00000611660|CT45A8;ENSG00000278289|ENST00000620654|CT45A6 28.23362336080872 0.3343390635154222 4 {[VA]|[{I|L}G]}[WM]EKVAVD 10 -1 + 47.09 0.0 0.0 4.107 4.107 79.561 0.0 0.0 0.0 10.820071231949916 7.09643375746645 7.09643375746645 10.820071231949916 0 0.9218851356388092 1.5228787452803376 1.1549471895720984 0.0 {[VA]|[{I|L}G]}[WM]EKVAVD;[MT]AVKE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QP;{[QD]|[EN]|[WG]|[KD]|[RS]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EKVAVD;[MT]AVKE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[AG]P;[HN][HV]EKVAVD;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QD]|[EN]|[WG]|[KD]|[RS]}EKVAVD;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MKVA[KP]VD;[MT]AV{[WT]|[RM]}[{I|L}T]QP;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}T]{[WT]|[RM]}VAVD;[MT]A{[ES]|[DT]|[{I|L}C]}VA[{I|L}T]QP 4.107;3.1633;3.1108;2.364;2.3626;2.2537;2.065;1.6884;1.6359;1.5832 -;-;-;-;-;-;-;-;-;- 520 1 2.656 45071.8 1.0 1264 3931 5196 HBL1_DMSO_200M_050219_2,5197 HBL1_DMSO_200M_050219_2,5197,TDKTEKVAVD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5198 26.332 406.0 176740.0 25 0 19947.0 + 39296 VADPETRTV 9 78 494.2590283992352 986.5035038652704 2 494.2591125369072 MULTI CID FTMS 0 0 0 5196 238571.546875 0.047920848230875 19 -0.3619976043701172 2 Unmodified _VADPETRTV_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 34.93206674587334 0.1032771302489716 4 VADPET 6 3 69.998 0.0 0.0 7.0956 0.0 0.0 0.0 371.2045382135376 371.2045382135376 59.02880645020623 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.4247425010840047 0.0 + VADPET 7.0956 + + 141 + 1 2.656 58630.9 1.0 1265 3931 5196 HBL1_DMSO_200M_050219_2,5198 HBL1_DMSO_200M_050219_2,5198,VADPETRTV True True VADPETRTV 26.332393 494.259112536907 198892340.0 5196.0 nc|ENSG00000039650|Q96T60-2|PNKP;;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;;ENSG00000039650|ENST00000322344|PNKP;;ENST00000595792.1_1_19:50369586-50370764:-|nuORF 7.544370969136556 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5199 26.344 675.0 189290.0 25 0 20751.0 + 6637 TAPPSSPKV 9 140 442.247550191288 882.4805474493761 2 442.2469665408134 MULTI CID FTMS 0 0 0 5196 130552.0546875 0.3708562947373429 -8 0.16046142578125 3 Unmodified _EAVAAVAGPV_ ENSG00000127022|ENST00000247461|CANX;nc|ENSG00000127022|P27824-2|CANX 21.74664581756881 0.480091245866545 4 [TA]V{[VA]|[{I|L}G]}D 6 6 39.939 0.0 0.0 4.5258 0.0 0.0 0.0 323.1720064752563 323.1720064752563 27.720384319171387 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.6549471895720985 0.0 [TA]V{[VA]|[{I|L}G]}D 4.5258 - 195 + 1 2.656 102005.7 1.0 1266 3931 5196 HBL1_DMSO_200M_050219_2,5199 HBL1_DMSO_200M_050219_2,5199,EAVAAVAGPV False False TAPPSSPKV 26.34413 442.246966540813 7159147.5 5196.0 ENSG00000127022|ENST00000247461|CANX;;nc|ENSG00000127022|P27824-2|CANX 2.6350839932759604 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5201 26.36 800.0 111380.0 25 0 6873.6 -1 0 79 628.785012212642 2511.110942984168 4 629.0361816287041 MULTI CID FTMS 0 0 0 5200 74950.84375 0.3960569133850752 6 -0.1271896362304687 1 4 {[QV]|[N{I|L}]|[RA]|[KV]}GQV{[C(Carbamidomethyl (C))G]|[NC]}D 8 -1 34.914 0.0 0.0 1.3904 0.0 0.0 0.0 1664.7215397562943 1664.7215397562943 23.945247061488857 0.0 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}GQV{[C(Carbamidomethyl (C))G]|[NC]}D 1.3904 - 362 1 2.656 73371.4 0.5400000214576721 1267 3932 5200 HBL1_DMSO_200M_050219_2,5201 HBL1_DMSO_200M_050219_2,5201, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5203 26.364 75.0 614850.0 25 0 102190.0 + 10966 GAPEGGKRSDL 11 70 543.7805663450163 1085.5465797568324 2 543.7808715701103 MULTI CID FTMS 0 0 0 5202 936714.6875 0.3990839522367864 14 -0.2471065521240234 1 Unmodified _GAPEGGKRSDL_ REV__nc|ENSG00000133475|P36268-2|GGT2P;REV__nc|ENSG00000133475|P36268-3|GGT2P;REV__nc|ENSG00000133475|P36268|GGT2P 20.41453444215458 0.6105011870913812 4 [QP]QDT[WK]A{I|L} 9 -1 [QP] + + 41.216 4.2692 1.8965 3.7968 3.7968 48.014 0.0 0.0 0.0 0.0 31.75205716106128 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.3252574989159953 [QP]QDT[WK]A{I|L} 3.7968 - 34 + 1 2.656 40742.1 1.0 1268 3933 5202 HBL1_DMSO_200M_050219_2,5203 HBL1_DMSO_200M_050219_2,5203,GAPEGGKRSDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5204 26.378 800.0 141550.0 25 0 7016.5 + 21194 LPDATSSHRTV 11 139 395.2070450298864 1182.5993056898592 3 395.2064086794853 MULTI CID FTMS 0 0 0 5202 124897.6171875 0.035652464955406 21 -0.3775405883789062 2 Unmodified _LPDATSSHRTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 26.345799442569017 0.4735952257064628 4 {I|L}PDATSSH 8 3 73.467 0.0 0.0 6.2123 0.0 0.0 0.0 371.20554529361567 371.20554529361567 53.254182945020446 0.0 0.0 0.0 0 0.2059771852360797 0.6777807052660807 1.274227503252014 0.0 + {I|L}PDATSSH 6.2123 + + 317 + 1 2.656 95096.4 0.5299999713897705 1269 3933 5202 HBL1_DMSO_200M_050219_2,5204 HBL1_DMSO_200M_050219_2,5204,LPDATSSHRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5205 26.392 800.0 134940.0 25 0 12762.0 + 4259 DAPTSPRV 8 117 421.7218195915287 0 421.7212402224541 PEAK CID FTMS 0 0 0 5202 98484.0078125 0.5197470818644699 -7 0.1668682098388672 3 Unmodified _DAPTSPRV_ ENSG00000105063|ENST00000412770|PPP6R1 19.256988751693697 0.4320151646958274 4 PTS 3 5 17.976 0.0 0.0 2.1364 0.0 0.0 186.0622354339752 367.2103975885376 553.2726330225128 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 + PTS 2.1364 + + 19 + 1 2.656 90548.9 0.5400000214576721 1270 3933 5202 HBL1_DMSO_200M_050219_2,5205 HBL1_DMSO_200M_050219_2,5205,DAPTSPRV False True DAPTSPRV 26.391747 421.721240222454 1296183.5 5202.0 ENSG00000105063|ENST00000412770|PPP6R1 4.60857089360555 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5207 26.401 324.0 252690.0 25 0 34022.0 + 7092 EELVGGRG 8 98 408.7142882866397 815.4140236400794 2 408.7138549685478 MULTI CID FTMS 0 0 0 5206 276889.8125 0.341690576014759 5 -0.1290950775146484 1 Unmodified _EELVGGRG_ REV__ENST00000222990.7_1_7:2293201-2294050:-|nuORF 32.116972079565 0.368454113111938 4 EE{I|L}V{NN|[MP]|[D{I|L}]|[EV]}V 7 -1 + 47.469 0.0 0.0 5.8215 5.8215 79.378 0.0 0.0 0.0 37.01167895154896 7.464169411070927 7.464169411070927 4.476212463643421 0 0.3807196863200844 2.0 0.3494850021680094 0.5484550065040282 EE{I|L}V{NN|[MP]|[D{I|L}]|[EV]}V;EE{I|L}GNRV;EEV{I|L}{NN|[MP]|[D{I|L}]|[EV]}V;EEVANRV;EE{I|L}GGGRV;EEVAGGRV;EE[RK]T[PG] 5.8215;5.2725;4.9001;4.3511;4.1283;3.2068;1.8661 -;-;-;-;-;-;- 97 + 1 2.616 68518.8 1.0 1271 3934 5206 HBL1_DMSO_200M_050219_2,5207 HBL1_DMSO_200M_050219_2,5207,EELVGGRG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5208 26.404 139.0 513800.0 25 0 84221.0 + -1 YSCHGEFN 8 80 507.194294769434 1012.374036605668 2 507.1945983767509 MULTI CID FTMS 0 0 0 5206 421243.90625 1.0 0 0.0 2 Carbamidomethyl (C) _YSC(Carbamidomethyl (C))HGEFN_ REV__nc|ENSG00000153982|Q8N9F7-3|GDPD1 12.531546534597751 0.7257836412119636 4 NT[MT] 4 -1 24.253 0.0 0.0 2.3956 0.0 0.0 547.1890125959 0.0 547.1890125959 0.0 17.26280941356464 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.805462187404089 NT[MT] 2.3956 - 65 1 2.616 56746.9 1.0 1272 3934 5206 HBL1_DMSO_200M_050219_2,5208 HBL1_DMSO_200M_050219_2,5208,YSCHGEFN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5209 26.415 675.0 247090.0 25 0 24415.0 + 17677 KPTGARPSAL 10 118 499.2932858985664 996.5720188639328 2 499.2933837771416 MULTI CID FTMS 0 0 0 5206 352985.34375 0.7864487773332932 -3 0.0745429992675781 3 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 30.7034409873982 0.2788461460996952 4 KPTGAR 6 4 57.964 0.0 0.0 5.8163 0.0 0.0 0.0 383.1944674127563 383.1944674127563 46.37009080640347 0.0 0.0 0.0 0 1.424742501084005 0.0 0.805462187404089 0.0 + KPTGAR 5.8163 + + 297 + 1 2.616 126522.4 1.0 1273 3934 5206 HBL1_DMSO_200M_050219_2,5209 HBL1_DMSO_200M_050219_2,5209,KPTGARPSAL False True KPTGARPSAL 26.415373 499.293383777142 5349816832.0 5206.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 6.008829275767009 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5212 26.429 479.0 293450.0 25 0 119850.0 + 10923 GAKPHYPAV 9 111 470.256694567385 0 470.2560912966728 PEAK CID FTMS 0 0 0 5211 249372.96875 1.0 0 0.0 1 Unmodified _GAKPHYPAV_ REV__nc|ENSG00000110881|P78348-1|ASIC1 8.593279151180031 0.3284076903191179 4 VHET 4 -1 14.686 0.0 0.0 1.5648 0.0 0.0 233.15223083223253 236.10495935611564 469.2571901883482 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 VHET 1.5648 - 88 + 1 2.616 113743.3 1.0 1274 3936 5211 HBL1_DMSO_200M_050219_2,5212 HBL1_DMSO_200M_050219_2,5212,GAKPHYPAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5213 26.439 565.0 140170.0 25 0 13604.0 7679 EKNQPPSV 8 110 449.7347627110056 897.4549724888112 2 449.7350341677666 MULTI CID FTMS 0 0 0 5211 145567.34375 0.4323471203047974 -12 0.2574787139892578 2 Unmodified _EKNQPPSV_ ENST00000560141.2_1_15:45024324-45024492:+|nuORF 32.30548876998284 0.3644845974844379 4 [TA]AQPQ 6 6 48.409 0.0 0.0 5.3941 0.0 0.0 0.0 298.14012808867375 298.14012808867375 27.569328687664047 0.0 0.0 0.0 0 1.0 2.0 0.805462187404089 0.0 [TA]AQPQ 5.3941 - 258 1 2.616 66568.5 1.0 1275 3936 5211 HBL1_DMSO_200M_050219_2,5213 HBL1_DMSO_200M_050219_2,5213,EKNQPPSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5215 26.458 800.0 72680.0 25 0 9068.4 + 11328 GEYQLPCQCTY 11 92 652.7661321430194 0 652.7656738162041 PEAK CID FTMS 0 0 0 5214 106390.6484375 0.6997851108289178 -1 0.0202655792236328 1 Unmodified _GEYQLPCQCTY_ REV__ENSG00000187122|ENST00000266058|SLIT1 18.373094154950223 0.3729378939122973 4 YQT 3 -1 30.445 0.0 0.0 2.3356 0.0 0.0 186.06389285713183 722.2613281907139 908.3252210478458 0.0 0.0 0.0 0.0 0 0.75 0.0 0.3494850021680094 0.3252574989159953 YQT 2.3356 - 86 + 1 2.616 50358.3 0.7300000190734863 1276 3937 5214 HBL1_DMSO_200M_050219_2,5215 HBL1_DMSO_200M_050219_2,5215,GEYQLPCQCTY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5216 26.471 800.0 214320.0 25 0 13767.0 + 18757 LALWEPRL 8 215 333.1984547340864 996.5735348024592 3 333.5321227908134 MULTI CID FTMS 0 0 0 5214 63161.859375 0.6269590147598357 -1 0.0202655792236328 2 Unmodified _LALWEPRL_ REV__ENST00000278550.11_1_11:78482086-78482179:-|nuORF 18.13498045792455 0.6430038125133779 4 PR{I|L} 3 -1 24.922 0.0 0.0 2.5007 0.0 0.0 612.3372370719909 0.0 612.3372370719909 0.0 12.703037561203844 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 PR{I|L} 2.5007 + + 154 1 2.616 137044.8 0.6899999976158142 1277 3937 5214 HBL1_DMSO_200M_050219_2,5216 HBL1_DMSO_200M_050219_2,5216,LALWEPRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5218 26.486 681.0 153960.0 25 0 16938.0 + 24444 MGYVHRSV 8 123 474.7396861768068 947.4648194204136 2 474.7401611208916 MULTI CID FTMS 0 0 0 5217 177286.34375 0.40440031643968 5 -0.095010757446289 1 Unmodified _MGYVHRSV_ ENSG00000266173|ENST00000336174|STRADA;nc|ENSG00000266173|Q7RTN6-2|STRADA;nc|ENSG00000266173|Q7RTN6-3|STRADA;nc|ENSG00000266173|Q7RTN6-4|STRADA;nc|ENSG00000266173|Q7RTN6-5|STRADA;nc|ENSG00000266173|Q7RTN6-6|STRADA 18.373094154950223 0.6394861461465958 4 MGYVH 5 3 53.029 0.0 0.0 5.597 0.0 0.0 0.0 357.19050012760005 357.19050012760005 33.56547323513812 0.0 0.0 0.0 0 1.0 0.958607314841775 0.0 0.0 + MGYVH 5.597 + + 235 + 1 2.575 82772.1 1.0 1278 3938 5217 HBL1_DMSO_200M_050219_2,5218 HBL1_DMSO_200M_050219_2,5218,MGYVHRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5219 26.5 800.0 161960.0 25 0 18826.0 + 23471 LTGWPLTMK 9 114 531.7840978546196 1061.5536427760392 2 531.7845336794853 MULTI CID FTMS 0 0 0 5217 134521.5625 0.0843900062804017 -50 1.1198177337646484 2 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 47.74868867922204 0.0453060283459952 4 [KT]T{[TV]|[{I|L}S]}HTTK 9 -1 55.754 0.0 0.0 5.2521 0.0 0.0 0.0 60.97161237455376 60.97161237455376 30.295088278393223 0.0 0.0 0.0 0 1.3807196863200843 0.0 1.9489700043360187 0.5044321917401079 [KT]T{[TV]|[{I|L}S]}HTTK 5.2521 - 843 1 2.575 104319.8 0.800000011920929 1279 3938 5217 HBL1_DMSO_200M_050219_2,5219 HBL1_DMSO_200M_050219_2,5219,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5220 26.507 371.0 111190.0 25 0 17026.0 + -1 FVSLHCNCS 9 68 562.2361348445719 1122.4577167559437 2 562.2359496951103 MULTI CID FTMS 0 0 0 5217 91090.9609375 0.3782548512670011 -5 0.1114177703857421 3 2 Carbamidomethyl (C) _FVSLHC(Carbamidomethyl (C))NC(Carbamidomethyl (C))S_ REV__ENST00000441719.5_1_2:86705327-86705963:+|nuORF 10.073929032068715 0.563993802247229 4 VE 2 -1 20.969 0.0 0.0 1.8681 0.0 0.0 876.3256682939592 0.0 876.3256682939592 0.0 5.689681045957329 0.0 0.0 0 0.0 0.0 0.0 0.0 VE 1.8681 - 38 1 2.575 40313.7 1.0 1280 3938 5217 HBL1_DMSO_200M_050219_2,5220 HBL1_DMSO_200M_050219_2,5220,FVSLHCNCS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5221 26.521 800.0 36502.0 25 0 2223.8 + + -1 YGQTLGQAQAHSQEQ 15 62 823.3810902291806 1644.747627525161 2 823.8824951052666 MULTI CID FTMS 0 0 0 5217 90520.1328125 0.960304819021476 -2 0.0523490905761718 4 Oxidation (M) _WM(Oxidation (M))NWHDRRSWR_ ENST00000492199.1_1_9:133511276-133512406:+|nuORF;ENSG00000107164|ENST00000319725|FUBP3;nc|ENSG00000107164|Q96I24-2|FUBP3 0.0 0.8751479354844584 4 Q 1 -1 11.99 0.0 0.0 0.72897 0.0 0.0 1498.677740295472 0.0 1498.677740295472 0.0 5.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.72897 - 90 + 1 2.575 26750.0 0.5899999737739563 1281 3938 5217 HBL1_DMSO_200M_050219_2,5221 HBL1_DMSO_200M_050219_2,5221,WMNWHDRRSWR False False YGQTLGQAQAHSQEQ 26.520842 823.882495105267 795799.5 5217.0 ENST00000492199.1_1_9:133511276-133512406:+|nuORF;;ENSG00000107164|ENST00000319725|FUBP3;;nc|ENSG00000107164|Q96I24-2|FUBP3 8.172123114267984 2.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5223 26.525 13.0 3013200.0 25 0 307550.0 + 36465 TAAKPAASI 9 65 415.2425370038571 828.4705210745142 2 415.2425109744072 MULTI CID FTMS 0 0 0 5222 5265801.0 0.9528804868813384 2 -0.0131759643554687 1 Unmodified _TAAKPAASI_ ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207 29.081581746732265 0.1611639662936252 4 [TA]A 3 6 26.043 0.0 0.0 3.1435 0.0 0.0 0.0 582.3251102681267 582.3251102681267 4.845143534448013 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [TA]A 3.1435 + + 108 1 2.575 34552.3 1.0 1282 3939 5222 HBL1_DMSO_200M_050219_2,5223 HBL1_DMSO_200M_050219_2,5223,TAAKPAASI False True TAAKPAASI 26.524983 415.242510974407 34667060.0 5222.0 ENSG00000010244|ENST00000394670|ZNF207;;nc|ENSG00000010244|O43670-3|ZNF207;;nc|ENSG00000010244|O43670-2|ZNF207;;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;;nc|ENSG00000010244|O43670|ZNF207 4.831476211547852 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5224 26.53 263.0 513090.0 25 0 52584.0 + 44870 YPPHVQKV 8 143 323.1838573595554 966.5297426788665 3 323.1851989626884 MULTI CID FTMS 0 0 0 5222 212943.40625 0.5555706479311764 3 -0.0353679656982421 2 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 11.640296217721598 0.738950129755968 4 YPPH 4 4 37.652 0.0 0.0 3.8955 0.0 0.0 0.0 469.2795809381469 469.2795809381469 25.796741502930843 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 + YPPH 3.8955 + + 142 + 1 2.575 110186.8 1.0 1283 3939 5222 HBL1_DMSO_200M_050219_2,5224 HBL1_DMSO_200M_050219_2,5224,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5226 26.534 15.0 2881900.0 25 0 184770.0 + 28905 QAPPPPQQV 9 82 481.2586875982422 960.5028222632844 2 481.2588073611259 MULTI CID FTMS 0 0 0 5225 4591805.0 0.7776277231991764 -6 0.1381149291992187 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 68.08070601005525 0.0218408846571049 4 [QA]PPPPGA{[QV]|[N{I|L}]|[RA]|[KV]} 10 2 + 57.331 0.0 0.0 5.9688 5.9688 82.388 0.0 0.0 0.0 8.89528929354558 7.269987279362624 7.269987279362624 6.53212513775344 0 0.8494850021680094 1.5228787452803376 0.0 0.3252574989159953 [QA]PPPPGA{[QV]|[N{I|L}]|[RA]|[KV]};[QA]PPPPQ{[QV]|[N{I|L}]|[RA]|[KV]};[PG]APAPPGA{[QV]|[N{I|L}]|[RA]|[KV]};[PG]AAPPPGA{[QV]|[N{I|L}]|[RA]|[KV]};[QP]APPPGA{[QV]|[N{I|L}]|[RA]|[KV]};[QP]PAPPGA{[QV]|[N{I|L}]|[RA]|[KV]};[PG]APAPPQ{[QV]|[N{I|L}]|[RA]|[KV]};{[HG]|PP}QAPPGA{[QV]|[N{I|L}]|[RA]|[KV]};[PG]APPAPGA{[QV]|[N{I|L}]|[RA]|[KV]};[PG]APPPAGA{[QV]|[N{I|L}]|[RA]|[KV]} 5.9688;5.2888;5.0427;4.7293;4.6967;4.6715;4.3581;4.2572;4.2088;4.1583 -;+;-;-;-;-;-;-;-;- + 751 1 2.575 41593.0 1.0 1284 3940 5225 HBL1_DMSO_200M_050219_2,5226 HBL1_DMSO_200M_050219_2,5226,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5228 26.552 800.0 273010.0 25 0 43833.0 28925 QAQPGQQQV 9 144 492.2496543004195 982.484755667639 2 492.2498351931572 MULTI CID FTMS 0 0 0 5227 254422.6875 0.7930935860106589 -14 0.3369636535644531 1 Unmodified _QAQPGQQQV_ ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2;nc|ENSG00000055917|Q8TB72|PUM2 28.486842064014134 0.1687311288560894 4 [QA]PPP{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 9 6 + 50.026 0.0 0.0 5.0918 5.0918 83.897 0.0 0.0 0.0 32.06749020886235 2.420299789533402 2.420299789533402 12.21848749616356 0 0.7059771852360797 1.5228787452803376 0.0 0.7614393726401688 [QA]PPP{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[QA]PP[VG][PG]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[QA]PPQQ{[ES]|[DT]|[{I|L}C]}V;[QA][YK]{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};V[DV]P{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y 5.0918;3.8482;3.6734;1.6678;0.68996 -;-;-;-;- 516 + 1 2.575 167108.4 0.9700000286102296 1285 3941 5227 HBL1_DMSO_200M_050219_2,5228 HBL1_DMSO_200M_050219_2,5228,QAQPGQQQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5229 26.556 205.0 320090.0 25 0 98651.0 + 12886 GVYGGSVHEA 10 77 488.2304138946287 974.4462748560576 2 488.2301818728447 MULTI CID FTMS 0 0 0 5227 222138.46875 0.884105058346401 -5 0.1149768829345703 2 Unmodified _GVYGGSVHEA_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000583938.5_1_18:72178083-72181050:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 18.1463463914782 0.5430639438673815 4 [VG]YGG[VS]YG 9 3 36.321 0.0 0.0 3.7274 0.0 0.0 0.0 132.0460604303344 132.0460604303344 19.463950151760656 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VG]YGG[VS]YG 3.7274 - 88 + 1 2.575 53110.3 1.0 1286 3941 5227 HBL1_DMSO_200M_050219_2,5229 HBL1_DMSO_200M_050219_2,5229,GVYGGSVHEA False True GVYGGSVHEA 26.556175 488.230181872845 1605951.625 5227.0 ENSG00000133313|ENST00000324262|CNDP2;;ENST00000583938.5_1_18:72178083-72181050:+|nuORF;;nc|ENSG00000133313|Q96KP4-2|CNDP2 5.25329343477885 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5231 26.564 240.0 295030.0 25 0 36609.0 17725 KPVGFTVHAI 10 67 534.8117276899189 1067.6089024466378 2 534.8122436404228 MULTI CID FTMS 0 0 0 5230 433326.03125 0.6771314373333593 5 -0.0508689880371093 1 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 20.453626601364224 0.5043500229302764 4 KPT 3 7 39.693 0.0 0.0 3.7179 0.0 0.0 0.0 738.3922449079292 738.3922449079292 22.17020729191784 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.7179 - 64 + 1 2.539 62511.1 1.0 1287 3942 5230 HBL1_DMSO_200M_050219_2,5231 HBL1_DMSO_200M_050219_2,5231,KPVGFTVHAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5232 26.566 115.0 912000.0 25 0 75788.0 + 8164 EPPPVKQV 8 100 447.2580906404142 892.5016283476284 2 447.2582580447197 MULTI CID FTMS 0 0 0 5230 840271.9375 0.7546255248955934 6 -0.0693168640136718 2 Unmodified _EPPPVKQV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 46.92087301778293 0.1537303740847981 4 [EP]P[VP]KQV 8 0 + 38.045 0.0 0.0 4.2627 4.2627 80.003 0.0 0.0 0.0 25.82615112585227 9.30365438956482 9.30365438956482 10.268024924119672 0 0.3054621874040891 1.5228787452803376 0.0 1.0709991640913 + + [EP]P[VP]KQV;[EP]V{[HG]|PP}KQV;[EP]P[VP]K[AG]V;[EP]V{[HG]|PP}K[AG]V;[VP]K[WR][HA];[VP]PK{NN|[MP]|[D{I|L}]|[EV]}[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}{NN|[MP]|[D{I|L}]|[EV]}K{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]KP{NN|[MP]|[D{I|L}]|[EV]}[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}[Y{I|L}]KQV 4.2627;3.1122;2.9767;1.8263;0.9346;0.90963;0.61338;0.49733;0.20687 +;-;-;-;-;-;-;-;- + 116 + 1 2.539 86745.7 1.0 1288 3942 5230 HBL1_DMSO_200M_050219_2,5232 HBL1_DMSO_200M_050219_2,5232,EPPPVKQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5236 26.588 578.0 165000.0 25 0 16938.0 -1 MTQATGQMLCL 11 115 437.8632179120823 1310.5678243364468 3 437.8634826540947 MULTI CID FTMS 0 0 0 5235 186599.375 0.9522659011132532 -8 0.1345748901367187 1 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))MTQATGQM(Oxidation (M))LC(Carbamidomethyl (C))L_ nc|ENSG00000146054|Q9C029-4|TRIM7 2.843284757254958 0.8617331327080043 4 A{I|L} 2 -1 19.464 0.0 0.0 1.4852 0.0 0.0 1108.4358796116403 0.0 1108.4358796116403 0.0 7.976649804380083 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L} 1.4852 - 101 + 1 2.539 78278.3 1.0 1289 3945 5235 HBL1_DMSO_200M_050219_2,5236 HBL1_DMSO_200M_050219_2,5236,MTQATGQMLCL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 5237 26.599 589.0 122900.0 25 0 12378.0 + 44878 YPPHVQKV 8 113 484.27136887568406 0 484.2712585330009 PEAK CID FTMS 0 0 0 5235 169490.8125 1.0 0 0.0 2 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 38.15118350030904 0.1572189310998713 4 PP 2 6 12.959 0.0 0.0 1.3408 0.0 0.0 163.06165812858416 606.3367403619749 769.398398490559 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + PP 1.3408 + + 88 + 1 2.539 60122.1 1.0 1290 3945 5235 HBL1_DMSO_200M_050219_2,5237 HBL1_DMSO_200M_050219_2,5237,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5239 26.607 346.0 264520.0 25 0 36548.0 + 36651 TAVAAAPPSV 10 100 442.247550191288 882.4805474493761 2 442.2467224001884 MULTI CID FTMS 0 0 0 5238 254431.578125 0.7227580795528206 7 -0.1212902069091796 1 Unmodified _TAVAAAPPSV_ REV__nc|ENSG00000292343|Q02040-3|AKAP17A 19.256988751693697 0.5244284437930726 4 [TA]P[DG]VPKV 9 -1 + 37.995 0.0 0.0 4.3055 4.3055 73.812 0.0 0.0 0.0 25.230701380755114 3.2899113075972224 3.2899113075972224 4.87787700334291 0 0.7742275032520141 2.0 0.0 0.0 [TA]P[DG]VPKV;[TA]P[PS]SPKV;[TA]P[PS][KP]SV;[KP]G[DV][{I|L}T]GP 4.3055;3.7527;2.3924;0.27233 -;-;-;- 133 + 1 2.539 74650.4 1.0 1291 3946 5238 HBL1_DMSO_200M_050219_2,5239 HBL1_DMSO_200M_050219_2,5239,TAVAAAPPSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5241 26.625 800.0 184190.0 25 0 22421.0 + 38908 TVLESTASLS 10 143 504.26465889923867 0 504.2648498415947 PEAK CID FTMS 0 0 0 5240 130383.5703125 0.8875959283043224 3 -0.072122573852539 1 Unmodified _TVLESTASLS_ REV__ENSG00000177853|ENST00000316045|ZNF518A;REV__nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 24.020572477871973 0.2658879206942018 4 T{I|L}DT 4 -1 19.474 0.0 0.0 1.9347 0.0 0.0 99.06294104809749 474.22214685611567 573.2850879042131 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 T{I|L}DT 1.9347 - 221 + 1 2.539 113830.6 0.6399999856948853 1292 3947 5240 HBL1_DMSO_200M_050219_2,5241 HBL1_DMSO_200M_050219_2,5241,TVLESTASLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5243 26.641 800.0 117110.0 25 0 32132.0 + 29960 QSRDGLPVQS 10 105 543.7805663450163 1085.5465797568324 2 544.2811157107353 MULTI CID FTMS 0 0 0 5242 22811.1875 0.0174797869354781 25 -0.3299026489257812 1 Unmodified _QSRDGLPVQS_ REV__ENST00000271375.6_1_1:168213838-168214108:+|nuORF 13.90604991867851 0.6142120002215601 4 [QP]Q{[MG]|[TS]}{I|L}[DN]A{I|L} 10 -1 [QP] + + 19.117 2.8651 1.2728 1.7611 1.7611 44.437 0.0 0.0 0.0 0.0 -0.4615381558516738 -0.4615381558516738 0.0 0 0.0 0.0 0.2742275032520141 0.0 [QP]Q{[MG]|[TS]}{I|L}[DN]A{I|L} 1.7611 - 201 + 1 2.539 77238.2 0.5799999833106995 1293 3948 5242 HBL1_DMSO_200M_050219_2,5243 HBL1_DMSO_200M_050219_2,5243,QSRDGLPVQS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5244 26.655 800.0 126020.0 25 0 9702.7 + 6586 EANWSGCNCL 10 131 548.7120436037093 1095.4095342742185 2 548.7124511599541 MULTI CID FTMS 0 0 0 5242 107616.9765625 0.5299322885625654 -6 0.0693168640136718 2 Unmodified _EANWSGCNCL_ ENST00000593411.1_1_19:17213347-17214289:+|nuORF 16.149105407346934 0.5765757077271437 4 NAYA{I|L} 5 8 38.042 0.0 0.0 3.4729 0.0 0.0 545.1385365216812 0.0 545.1385365216812 0.0 -0.7000540373486643 -0.7000540373486643 0.0 0 0.6694451763165201 0.0 0.0 0.7614393726401688 NAYA{I|L} 3.4729 - 286 1 2.539 79490.5 0.5799999833106995 1294 3948 5242 HBL1_DMSO_200M_050219_2,5244 HBL1_DMSO_200M_050219_2,5244,EANWSGCNCL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5245 26.669 800.0 142550.0 25 0 24536.0 18002 KSAEEELA 8 123 438.719286381691 0 438.7202941775322 PEAK CID FTMS 0 0 0 5242 99606.15625 0.8540828354483564 -8 0.0956649780273437 3 Unmodified _KSAEEELA_ ENSG00000007264|ENST00000310132|MATK;nc|ENSG00000007264|P42679-2|MATK;nc|ENSG00000007264|P42679-3|MATK 25.399314129420983 0.3159236278339657 4 EA{M(Oxidation (M))|F}QE 5 6 14.226 0.0 0.0 1.6251 0.0 0.0 202.130026765532 66.03576837711171 268.16579514264373 0.0 0.0 0.0 0.0 0 0.5 0.0 0.75 0.0 EA{M(Oxidation (M))|F}QE 1.6251 - 50 + 1 2.539 90089.9 0.5400000214576721 1295 3948 5242 HBL1_DMSO_200M_050219_2,5245 HBL1_DMSO_200M_050219_2,5245,KSAEEELA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5247 26.679 362.0 373040.0 25 0 37921.0 + 17622 KPTAAFHLL 9 101 499.2932858985664 996.5720188639328 2 499.2926513552666 MULTI CID FTMS 0 0 0 5246 234626.59375 0.5227463435854418 12 -0.1644802093505859 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 14.838274106304384 0.4350285940865338 4 KPT 3 -1 42.14 0.0 0.0 4.2285 0.0 0.0 0.0 667.3548695829387 667.3548695829387 29.709792068469785 0.0 0.0 0.0 0 1.2134679910804405 0.0 0.3807196863200844 0.0 KPT 4.2285 + + 90 + 1 2.528 106182.1 1.0 1296 3949 5246 HBL1_DMSO_200M_050219_2,5247 HBL1_DMSO_200M_050219_2,5247,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5250 26.688 178.0 590260.0 25 0 55691.0 + 41988 VQNLECFF 8 77 500.23270111746274 998.4508493017256 2 500.2326537966728 MULTI CID FTMS 0 0 0 5249 416258.03125 1.0 0 0.0 1 Unmodified _VQNLECFF_ REV__ENSG00000185385|ENST00000641113|OR7A17;REV__ENSG00000188269|ENST00000322301|OR7A5 6.723162845929126 0.7835230281555235 4 VQ 2 -1 25.217 0.0 0.0 2.5256 0.0 0.0 0.0 768.3005396487031 768.3005396487031 22.74227503252014 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 VQ 2.5256 + + 15 + 1 2.528 87219.0 1.0 1297 3951 5249 HBL1_DMSO_200M_050219_2,5250 HBL1_DMSO_200M_050219_2,5250,VQNLECFF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5251 26.702 800.0 177480.0 25 0 13032.0 7680 EKNQPPSV 8 131 449.7347627110056 897.4549724888112 2 449.7354614138603 MULTI CID FTMS 0 0 0 5249 169601.453125 0.503730424483361 3 -0.0546112060546875 2 Unmodified _EKNQPPSV_ ENST00000560141.2_1_15:45024324-45024492:+|nuORF 39.957323273325 0.2350051964751539 4 [TA]AQPQ 6 6 54.659 0.0 0.0 6.0904 0.0 0.0 0.0 298.1382561329662 298.1382561329662 28.60251817814735 0.0 0.0 0.0 0 1.0 1.6989700043360187 1.305462187404089 0.0 [TA]AQPQ 6.0904 - 506 1 2.528 111695.3 0.9100000262260436 1298 3951 5249 HBL1_DMSO_200M_050219_2,5251 HBL1_DMSO_200M_050219_2,5251,EKNQPPSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5252 26.716 800.0 171210.0 25 0 67616.0 29755 QPQFLHLG 8 122 470.256694567385 0 470.2567626833916 PEAK CID FTMS 0 0 0 5249 112499.046875 0.4511276720925671 15 -0.2169952392578125 3 Unmodified _QPQFLHLG_ ENST00000548662.5_1_12:93772383-93788394:+|nuORF 9.347437153973935 0.5488964601725408 4 PYK 3 7 13.188 0.0 0.0 1.4052 0.0 0.0 114.04456993552216 433.2201021783813 547.2646721139034 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PYK 1.4052 - 34 + 1 2.528 112091.0 0.7400000095367432 1299 3951 5249 HBL1_DMSO_200M_050219_2,5252 HBL1_DMSO_200M_050219_2,5252,QPQFLHLG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5255 26.737 800.0 149460.0 25 0 8334.6 + 34538 SPAPPPQQV 9 145 460.7456704744902 919.4767880157804 2 460.7452880740166 MULTI CID FTMS 0 0 0 5254 148160.09375 0.5723648164245728 -14 0.1992664337158203 1 Unmodified _SPAPPPQQV_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 56.17704186161178 0.0281986971544335 4 [PS]APPPQQV 9 0 + 59.156 0.0 0.0 6.4336 6.4336 84.846 0.0 0.0 0.0 14.71726222832956 36.48734793436448 14.71726222832956 7.302046884880937 0 1.3737125054200234 1.3979400086720375 0.4326217639455209 0.0 + + [PS]APPPQQV;[PS]PAPPQQV;[PS]APPP[AG]QV;[PA]SPPPQQV;[PS]PAPP[AG]QV;[PS]APPG[PA]QV;[PS]PPAPQQV;[PS]A[YK]QQV;{[SA]|[TG]}PPPPQQV;{[HG]|PP}SAPPQQV 6.4336;5.6395;5.4322;4.7797;4.638;4.5859;4.1378;3.9305;3.8789;3.8086 +;-;-;-;-;-;-;-;-;- + 613 1 2.509 94885.5 0.7799999713897705 1300 3953 5254 HBL1_DMSO_200M_050219_2,5255 HBL1_DMSO_200M_050219_2,5255,SPAPPPQQV True True SPAPPPQQV 26.737147 460.745288074017 15047380.5 5254.0 nc|ENSG00000189079|Q68CP9-3|ARID2;;ENSG00000189079|ENST00000334344|ARID2 9.035130182902018 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5257 26.742 49.0 1175900.0 25 0 177610.0 + -1 LTGWPLTMK 9 79 531.7840978546196 1061.5536427760392 2 531.7845336794853 MULTI CID FTMS 0 0 0 5256 1376545.375 0.8635542933238523 -34 0.6174736022949219 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 34.40172386719151 0.1061884637610825 4 K[HQ][{I|L}P]T{M(Oxidation (M))|F}K 8 -1 41.916 0.0 0.0 3.9486 0.0 0.0 63.99660574474621 0.0 63.99660574474621 0.0 24.19978440589176 0.0 0.0 0 1.5 0.0 0.9247425010840048 0.3054621874040891 K[HQ][{I|L}P]T{M(Oxidation (M))|F}K 3.9486 - 167 + 1 2.509 47759.0 1.0 1301 3954 5256 HBL1_DMSO_200M_050219_2,5257 HBL1_DMSO_200M_050219_2,5257,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5260 26.762 800.0 178320.0 25 0 15961.0 + 3075 AVMLFFYY 8 183 351.84203768145 1052.50428364455 3 352.1755248904228 MULTI CID FTMS 0 0 0 5259 76228.1171875 0.0755261394840653 -32 0.5844097137451172 1 Unmodified _AVMLFFYY_ REV__ENSG00000109193|ENST00000226444|SULT1E1;REV__ENST00000504002.1_1_4:70715089-70723308:-|nuORF 2.889219685676258 0.8067950007271085 4 Y 1 -1 13.099 0.0 0.0 1.2446 0.0 0.0 871.4299255896657 0.0 871.4299255896657 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2446 + + 47 + 1 2.509 116573.2 0.5799999833106995 1302 3956 5259 HBL1_DMSO_200M_050219_2,5260 HBL1_DMSO_200M_050219_2,5260,AVMLFFYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5263 26.782 800.0 89370.0 25 0 11102.0 + -1 YSINCRIQ 8 117 527.2591937562819 1052.5038345793637 2 527.2596313357353 MULTI CID FTMS 0 0 0 5262 71131.4609375 0.0098041526601194 -30 0.5251865386962891 1 Carbamidomethyl (C) _YSINC(Carbamidomethyl (C))RIQ_ REV__ENSG00000128833|ENST00000261839|MYO5C 19.438996006549623 0.6237395211498085 4 {[QN]|[E{I|L}]|[KN]}EATQ 6 -1 21.022 0.0 0.0 1.9973 0.0 0.0 0.0 378.1684957504471 378.1684957504471 9.601930094127642 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.7742275032520141 0.2614393726401688 {[QN]|[E{I|L}]|[KN]}EATQ 1.9973 - 216 1 2.509 60672.7 0.5799999833106995 1303 3958 5262 HBL1_DMSO_200M_050219_2,5263 HBL1_DMSO_200M_050219_2,5263,YSINCRIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5265 26.788 233.0 483200.0 25 0 53956.0 + 44871 YPPHVQKV 8 132 323.1838573595554 966.5297426788665 3 323.1835204958916 MULTI CID FTMS 0 0 0 5264 190245.15625 0.4963507750011883 23 -0.2408943176269531 1 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 15.847184025352805 0.6768015514314958 4 YPPHVQKV 8 0 + 55.014 0.0 0.0 5.6919 5.6919 81.675 0.0 0.0 0.0 37.62065762321936 7.556870437510774 7.556870437510774 6.989700043360188 0 0.0 1.0457574905606752 0.0 0.0 + + YPPHVQKV;YPPVHQKV;YPPHV[AG]KV;YPPHV{[VA]|[{I|L}G]}[KG];YPVPHQKV;YPPVH[AG]KV;YPPVH{[VA]|[{I|L}G]}[KG];YPVPH[AG]KV;YPVPH{[VA]|[{I|L}G]}[KG];YVPPHQKV 5.6919;4.9688;4.7337;4.6103;4.4751;4.0105;3.8872;3.5168;3.3935;3.0817 +;-;-;-;-;-;-;-;-;- + 203 + 1 2.509 92676.2 1.0 1304 3959 5264 HBL1_DMSO_200M_050219_2,5265 HBL1_DMSO_200M_050219_2,5265,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5266 26.796 436.0 159560.0 25 0 50563.0 1296 AISPTYTW 8 86 469.7325555905883 937.4505582479766 2 469.7331725955009 MULTI CID FTMS 0 0 0 5264 108871.0625 0.545205662957444 -16 0.2158279418945312 2 Unmodified _AISPTYTW_ ENSG00000112499|ENST00000366953|SLC22A2;nc|ENSG00000112499|O15244-2|SLC22A2;nc|ENSG00000112499|O15244-3|SLC22A2 19.438996006549623 0.6237395211498085 4 {I|L}A 2 7 36.44 0.0 0.0 3.8872 0.0 0.0 0.0 750.3065279596311 750.3065279596311 8.574550232146692 0.0 0.0 0.0 0 0.3252574989159953 1.2218487496163564 0.0 0.0 {I|L}A 3.8872 - 89 + 1 2.509 60396.1 1.0 1305 3959 5264 HBL1_DMSO_200M_050219_2,5266 HBL1_DMSO_200M_050219_2,5266,AISPTYTW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5268 26.801 12.0 3998800.0 25 0 270160.0 + 28906 QAPPPPQQV 9 87 481.2586875982422 960.5028222632844 2 481.2588683962822 MULTI CID FTMS 0 0 0 5267 5021137.5 0.8503357006656433 14 -0.1626930236816406 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 88.90359156742426 0.0153595091083554 4 [QA]PPPPQQV 9 0 + 51.84 0.0 0.0 5.3972 5.3972 86.404 0.0 0.0 0.0 35.900862630397526 2.4628275663518124 2.4628275663518124 17.402953031565858 0 1.6994536292803186 1.6989700043360187 0.0 1.079689690656103 + + [QA]PPPPQQV;[QA][YK]PQQV 5.3972;3.5853 +;- + 468 + 1 2.509 42063.0 1.0 1306 3960 5267 HBL1_DMSO_200M_050219_2,5268 HBL1_DMSO_200M_050219_2,5268,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5269 26.805 244.0 337930.0 25 0 38549.0 2406 AQPSTPVHF 9 101 492.2496543004195 982.484755667639 2 492.2492248415947 MULTI CID FTMS 0 0 0 5267 238791.09375 0.7443663405591333 5 -0.0991497039794921 2 Unmodified _AQPSTPVHF_ ENST00000518820.1_1_8:143620820-143621084:+|nuORF 25.399314129420983 0.2080152500878129 4 [QA]PPP{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 9 4 + 46.673 0.0 0.0 4.7505 4.7505 78.29 0.0 0.0 0.0 37.34050378830932 3.415149811213496 3.415149811213496 7.728787452803374 0 0.7059771852360797 1.6989700043360187 0.0 0.25 [QA]PPP{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[QA]PP[VG]GP{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[QA]PP[VG]GMQV;[QA]PP[VG]GM[AG]V;[QA][YK]{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 4.7505;3.9638;3.4812;2.2823;2.1015 -;-;-;-;- 250 + 1 2.509 66576.9 1.0 1307 3960 5267 HBL1_DMSO_200M_050219_2,5269 HBL1_DMSO_200M_050219_2,5269,AQPSTPVHF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5270 26.819 800.0 102900.0 25 0 8632.5 + 39194 TYQNTAQTV 9 130 513.2482128490353 1024.4818727648706 2 513.2488891482353 MULTI CID FTMS 0 0 0 5267 118130.59375 0.3076078728913787 -19 0.2627067565917969 3 Unmodified _TYQNTAQTV_ ENSG00000198218|ENST00000395443|QRICH1;ENST00000479449.1_1_3:49070551-49094468:-|nuORF 47.74868867922204 0.0453060283459952 4 [YT]QNTA 6 3 44.028 0.0 0.0 4.2976 0.0 0.0 0.0 343.16220658738933 343.16220658738933 8.86092561455488 0.0 0.0 0.0 0 0.0 2.0 0.9247425010840048 0.3054621874040891 + [YT]QNTA 4.2976 + + 2603 1 2.509 67867.8 0.5199999809265137 1308 3960 5267 HBL1_DMSO_200M_050219_2,5270 HBL1_DMSO_200M_050219_2,5270,TYQNTAQTV True True TYQNTAQTV 26.819244 513.248889148235 2586684.0 5267.0 ENST00000479449.1_1_3:49070551-49094468:-|nuORF;;ENSG00000198218|ENST00000395443|QRICH1 7.089072386423747 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5271 26.833 800.0 173470.0 25 0 11272.0 -1 PMKLLRKKI 9 156 381.5864252348852 1141.7374463048557 3 381.5864440798759 MULTI CID FTMS 0 0 0 5267 108325.9140625 0.7919173323320985 -12 0.1711978912353515 4 Oxidation (M) _PM(Oxidation (M))KLLRKKI_ ENSG00000088205|ENST00000263239|DDX18 4.5288652416199255 0.7565837746943351 4 {I|L}KKPE 5 -1 40.701 0.0 0.0 3.5648 0.0 0.0 528.375982920998 0.0 528.375982920998 0.0 26.096981436199016 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}KKPE 3.5648 - 110 1 2.509 118009.3 0.449999988079071 1309 3960 5267 HBL1_DMSO_200M_050219_2,5271 HBL1_DMSO_200M_050219_2,5271,PMKLLRKKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5273 26.85 745.0 169850.0 25 0 15435.0 -1 MLQDWCRRMG 10 119 437.8632179120823 1310.5678243364468 3 437.8632995486259 MULTI CID FTMS 0 0 0 5272 79548.5234375 0.405957127956295 8 -0.1060028076171875 1 Oxidation (M) _MLQDWCRRM(Oxidation (M))G_ ENSG00000225110|ENST00000436629|PNMA6F 5.40270961882225 0.7016457984575614 4 SPM 3 -1 18.901 0.0 0.0 1.4422 0.0 0.0 977.433828676039 0.0 977.433828676039 0.0 -0.5630250076728736 -0.5630250076728736 0.0 0 0.5 0.0 0.0 0.0 SPM 1.4422 - 127 1 2.501 102421.6 1.0 1310 3961 5272 HBL1_DMSO_200M_050219_2,5273 HBL1_DMSO_200M_050219_2,5273,MLQDWCRRMG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5274 26.855 258.0 246800.0 25 0 23003.0 + 28887 QAPAVIRQ 8 93 441.7613484309615 881.5081439287229 2 441.7614013552666 MULTI CID FTMS 0 0 0 5272 148503.046875 0.6900456710251528 -8 0.113555908203125 2 Unmodified _QAPAVIRQ_ ENSG00000254585|ENST00000650528|MAGEL2 23.1484247019978 0.5573009939494978 4 [QA]PAV 5 3 34.481 0.0 0.0 3.9116 0.0 0.0 0.0 412.2327059381469 412.2327059381469 24.30023604645598 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 + [QA]PAV 3.9116 + + 111 + 1 2.501 55855.3 1.0 1311 3961 5272 HBL1_DMSO_200M_050219_2,5274 HBL1_DMSO_200M_050219_2,5274,QAPAVIRQ False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5275 26.868 800.0 158320.0 25 0 9090.2 10595 FVKYIFNNS 9 132 377.8647455556112 1130.5724072670337 3 377.8634521365166 MULTI CID FTMS 0 0 0 5272 91654.359375 0.8679248828513977 -1 0.0369396209716796 3 Unmodified _FVKYIFNNS_ ENSG00000176928|ENST00000652361|GCNT4 7.289230182591677 0.6602208344931196 4 [VP]W{I|L} 4 7 16.031 0.0 0.0 1.4179 0.0 0.0 0.0 632.2574871373826 632.2574871373826 4.830994625731293 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 [VP]W{I|L} 1.4179 - 95 1 2.501 103662.9 0.8399999737739563 1312 3961 5272 HBL1_DMSO_200M_050219_2,5275 HBL1_DMSO_200M_050219_2,5275,FVKYIFNNS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5278 26.877 97.0 819470.0 25 0 68685.0 + 8165 EPPPVKQV 8 98 447.2580906404142 892.5016283476284 2 447.2584716677666 MULTI CID FTMS 0 0 0 5277 492635.5625 0.4424226888260188 27 -0.318552017211914 1 Unmodified _EPPPVKQV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 30.22481116460888 0.4082965392918993 4 [EP]P[VP]KQV 8 0 + 32.697 0.0 0.0 3.6635 3.6635 78.411 0.0 0.0 0.0 21.587899559364217 4.268505916515736 4.268505916515736 11.658656145495245 0 0.2742275032520141 1.5228787452803376 0.0 0.6643943297944485 + + [EP]P[VP]KQV;[EP]P[VP]K[AG]V;[EP]{I|L}{I|L}[{I|L}T][HA];{[QD]|[EN]|[WG]|[KD]|[RS]}[Y{I|L}]KQV 3.6635;2.3572;0.7476;0.11861 +;-;-;- + 51 + 1 2.501 66445.3 1.0 1313 3963 5277 HBL1_DMSO_200M_050219_2,5278 HBL1_DMSO_200M_050219_2,5278,EPPPVKQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5279 26.891 800.0 119530.0 25 0 5598.4 + 7369 EGDVQWNVF 9 133 547.2508470691732 1092.4871412051464 2 547.2505370974541 MULTI CID FTMS 0 0 0 5277 106767.9609375 0.6104279593293962 -6 0.11077880859375 2 Unmodified _EGDVQWNVF_ REV__ENSG00000130204|ENST00000426677|TOMM40;REV__ENST00000448659.1_1_2:132481246-132481432:-|nuORF;REV__nc|ENSG00000130204|O96008-2|TOMM40 19.256988751693697 0.3154191944385105 4 {[DA]|[EG]}D{I|L}N{M(Oxidation (M))|F}VG{[QD]|[EN]|[WG]|[KD]|[RS]} 10 -1 + 64.926 0.0 0.0 5.943 5.943 76.653 0.0 0.0 0.0 10.791812460476253 2.6884531229258 2.6884531229258 2.6884531229258 0 0.9247425010840048 2.0 0.3252574989159953 0.3252574989159953 {[DA]|[EG]}D{I|L}N{M(Oxidation (M))|F}VG{[QD]|[EN]|[WG]|[KD]|[RS]};{[DA]|[EG]}D{I|L}N{M(Oxidation (M))|F}VS{[NV]|[RG]};{[DA]|[EG]}D{I|L}GG{M(Oxidation (M))|F}VG{[QD]|[EN]|[WG]|[KD]|[RS]};{[DA]|[EG]}D{I|L}GG{M(Oxidation (M))|F}VS{[NV]|[RG]};{[DA]|[EG]}D{I|L}M[QT]G{[QD]|[EN]|[WG]|[KD]|[RS]};{[DA]|[EG]}D{I|L}M[QT]S{[NV]|[RG]};{[DA]|[EG]}D{I|L}N[W{M(Oxidation (M))|F}]{[NV]|[RG]};{[DA]|[EG]}D{I|L}GG[W{M(Oxidation (M))|F}]{[NV]|[RG]};{[DA]|[EG]}D[YV][NP]G{[QD]|[EN]|[WG]|[KD]|[RS]};{[DA]|[EG]}D[YV][NP]S{[NV]|[RG]} 5.943;5.6969;5.1041;4.858;4.7443;4.4982;3.636;2.7931;2.4047;2.1586 -;-;-;-;-;-;-;-;-;- 564 + 1 2.501 80204.1 0.5600000023841858 1314 3963 5277 HBL1_DMSO_200M_050219_2,5279 HBL1_DMSO_200M_050219_2,5279,EGDVQWNVF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5283 26.916 800.0 71585.0 25 0 3295.3 + 41528 VPNPRTSNEV 10 99 556.7882724420891 1111.5619919509782 2 556.7883788943291 MULTI CID FTMS 0 0 0 5282 39811.84765625 0.4347700318071569 -14 0.1836700439453125 1 Unmodified _VPNPRTSNEV_ ENSG00000100603|ENST00000261531|SNW1 12.240655878213236 0.6421556946785427 4 VPN 3 7 45.234 0.0 0.0 4.0694 0.0 0.0 0.0 798.375780163343 798.375780163343 16.77362719830313 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + VPN 4.0694 + + 531 + 1 2.501 51392.7 0.5400000214576721 1315 3966 5282 HBL1_DMSO_200M_050219_2,5283 HBL1_DMSO_200M_050219_2,5283,VPNPRTSNEV False True VPNPRTSNEV 26.915625 556.788378894329 1020257.75 5282.0 ENSG00000100603|ENST00000261531|SNW1 5.452976226806641 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5284 26.929 800.0 150800.0 25 0 24166.0 + 44879 YPPHVQKV 8 126 484.27136887568406 0 484.2721740603447 PEAK CID FTMS 0 0 0 5282 102811.234375 0.6065888342767842 21 -0.1968574523925781 2 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 36.04419817259434 0.1760516939127867 4 PP 2 6 12.959 0.0 0.0 1.3408 0.0 0.0 163.0620224813377 606.3388765924436 769.4008990737814 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + PP 1.3408 + + 178 + 1 2.501 98355.9 0.6000000238418579 1316 3966 5282 HBL1_DMSO_200M_050219_2,5284 HBL1_DMSO_200M_050219_2,5284,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5286 26.935 177.0 423810.0 25 0 39020.0 + 17623 KPTAAFHLL 9 74 499.29326404651647 996.571975159833 2 499.2933532595634 MULTI CID FTMS 0 0 0 5285 303506.28125 0.6293088165429112 -5 0.0610008239746093 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 4 KPT 3 -1 43.94 0.0 0.0 4.4091 0.0 0.0 0.0 667.3536513622456 667.3536513622456 24.274400170273577 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 KPT 4.4091 + + 27 + 1 2.501 63335.1 1.0 1317 3967 5285 HBL1_DMSO_200M_050219_2,5286 HBL1_DMSO_200M_050219_2,5286,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5296 26.983 800.0 265420.0 25 0 17331.0 + 27146 PFPLGTPRL 9 250 333.19824874754227 996.5729168428268 3 333.1978942751884 MULTI CID FTMS 0 0 0 5295 128324.0078125 1.0 0 0.0 1 Unmodified _PFPLGTPRL_ REV__ENST00000595775.5_1_19:42817488-42818494:+|nuORF 28.486842064014134 0.1687311288560894 4 TPR{I|L} 4 -1 31.019 0.0 0.0 3.1125 0.0 0.0 511.2853871076188 0.0 511.2853871076188 0.0 19.23576987599736 0.0 0.0 0 0.3807196863200844 0.0 0.3054621874040891 0.0 TPR{I|L} 3.1125 + + 335 1 2.501 168421.2 0.5600000023841858 1318 3976 5295 HBL1_DMSO_200M_050219_2,5296 HBL1_DMSO_200M_050219_2,5296,PFPLGTPRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5298 26.991 272.0 222170.0 25 0 14470.0 + 34539 SPAPPPQQV 9 90 460.7456704744902 919.4767880157804 2 460.7453491091728 MULTI CID FTMS 0 0 0 5297 197043.859375 0.761210185173504 10 -0.113067626953125 1 Unmodified _SPAPPPQQV_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 56.17704186161178 0.0281986971544335 4 [PS]APPPQQV 9 0 + 58.725 0.0 0.0 6.3868 6.3868 85.783 0.0 0.0 0.0 14.71726222832956 45.23030501469917 14.71726222832956 8.788624837399297 0 1.337180496500464 1.3979400086720375 0.25 0.0 + + [PS]APPPQQV;[PS]PAPPQQV;[PS]APPP[AG]QV;[PS]APPG[PA]QV;[PS]PAPP[AG]QV;{[SA]|[TG]}PPPPQQV;[PA]SPPPQQV;[PS]PAPG[PA]QV;[PS]A[YK]QQV;{[SA]|[TG]}PPPP[AG]QV 6.3868;5.431;5.3853;4.8755;4.4295;4.3475;4.2117;3.9197;3.5084;3.3461 +;-;-;-;-;-;-;-;-;- + 318 1 2.501 51402.8 1.0 1319 3977 5297 HBL1_DMSO_200M_050219_2,5298 HBL1_DMSO_200M_050219_2,5298,SPAPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5301 26.999 38.0 1365700.0 25 0 185490.0 + -1 LTGWPLTMK 9 70 531.7840978546196 1061.5536427760392 2 531.7843505740166 MULTI CID FTMS 0 0 0 5300 1431405.25 0.8979697811441937 -9 0.0514945983886718 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 39.94969957227396 0.0757326808254658 4 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K 9 -1 + 53.394 0.0 0.0 5.0298 5.0298 79.229 0.0 0.0 0.0 0.7378621416091846 41.48325926497115 0.7378621416091846 7.431278489376034 0 1.424742501084005 0.0 0.805462187404089 0.0 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;{[DS]|[MA]|[CV]|TT}K{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;{NN|[MP]|[D{I|L}]|[EV]}[QT][{I|L}P]T{M(Oxidation (M))|F}K;[HT]VGH[RP]MK;[KT]T[{I|L}P]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K;[KT]T{[TV]|[{I|L}S]}HGV[YG];{[DS]|[MA]|[CV]|TT}K[{I|L}P]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K;{[DS]|[MA]|[CV]|TT}K{[TV]|[{I|L}S]}HGV[YG];[PS]{[TV]|[{I|L}S]}[RV]E{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]HR[YG] 5.0298;4.3298;3.4347;3.1474;3.0761;2.7253;2.376;2.0253;1.7364;1.078 -;-;-;-;-;-;-;-;-;- 288 1 2.501 46355.7 1.0 1320 3979 5300 HBL1_DMSO_200M_050219_2,5301 HBL1_DMSO_200M_050219_2,5301,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5302 27.013 800.0 168080.0 25 0 75724.0 -1 0 99 508.2939553379258 507.2866788713258 1 508.2947570681572 MULTI CID FTMS 0 0 0 5300 116113.9140625 0.5601290605696616 25 -0.5130672454833984 2 4 H 1 -1 10.379 0.0 0.0 2.0459 0.0 0.0 352.2170510410508 0.0 352.2170510410508 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 H 2.0459 - 20 + 1 2.501 107781.3 0.6000000238418579 1321 3979 5300 HBL1_DMSO_200M_050219_2,5302 HBL1_DMSO_200M_050219_2,5302, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5304 27.018 48.0 1071900.0 25 0 198700.0 + 45329 YSLENEVTV 9 80 351.84203768145 1052.50428364455 3 351.8418151736259 MULTI CID FTMS 0 0 0 5303 1067616.75 0.709063766254381 -6 0.0542678833007812 1 Unmodified _YSLENEVTV_ REV__ENSG00000144452|ENST00000272895|ABCA12;REV__nc|ENSG00000144452|Q86UK0-2|ABCA12 7.289230182591677 0.6602208344931196 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATEC 7 -1 25.934 0.0 0.0 2.4641 0.0 0.0 0.0 274.14927811160004 274.14927811160004 12.439644787305395 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATEC 2.4641 - 165 1 2.501 47857.3 1.0 1322 3980 5303 HBL1_DMSO_200M_050219_2,5304 HBL1_DMSO_200M_050219_2,5304,YSLENEVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5306 27.023 11.0 4276400.0 25 0 875580.0 + 36353 SYPHHATQL 9 83 527.2591937562819 1052.5038345793637 2 527.2596313357353 MULTI CID FTMS 0 0 0 5305 5144299.0 0.7090462090974824 -7 0.0589714050292968 1 Unmodified _SYPHHATQL_ ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 62.57269311338072 0.0246576765497938 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 9 4 + 23.579 0.0 0.0 2.2403 2.2403 63.364 0.0 0.0 0.0 1.7609125905568137 3.6527926935124135 1.7609125905568137 1.7609125905568137 0 0.0 0.0 0.4247425010840047 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[QN]|[E{I|L}]|[KN]}EATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HAT[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HM]{I|L}Q[RH][MT];{[QN]|[E{I|L}]|[KN]}EAT[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[{M(Oxidation (M))|F}C]|[YS]}[RH][AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HM][R{M(Oxidation (M))|F}]{[CT]|[{M(Oxidation (M))|F}G]};{[QN]|[E{I|L}]|[KN]}EA[WR]{[{M(Oxidation (M))|F}C]|[YS]} 2.2403;2.073;1.3654;1.3437;1.1981;0.46364;0.15097;0.011718 -;-;-;-;-;-;-;- 185 1 2.501 43514.0 1.0 1323 3981 5305 HBL1_DMSO_200M_050219_2,5306 HBL1_DMSO_200M_050219_2,5306,SYPHHATQL True True SYPHHATQL 27.02253 527.259631335735 196472224.0 5305.0 ENST00000563314.5_1_16:28834580-28846939:+|nuORF;;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;;ENSG00000168488|ENST00000336783|ATXN2L;;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;;nc|ENSG00000168488|Q8WWM7-5|ATXN2L 10.766894976298014 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5309 27.036 417.0 241830.0 25 0 32209.0 39467 VAPYRPDQ 8 120 473.2431478975281 944.4717428618562 2 473.2429687380791 MULTI CID FTMS 0 0 0 5308 85003.390625 0.6981199059089964 -4 0.0318946838378906 1 Unmodified _VAPYRPDQ_ ENSG00000109111|ENST00000314616|SUPT6H 15.847184025352805 0.6768015514314958 4 {[VA]|[{I|L}G]}PYD 5 3 38.06 0.0 0.0 4.0297 0.0 0.0 0.0 396.2013949029906 396.2013949029906 14.503187623076954 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 {[VA]|[{I|L}G]}PYD 4.0297 - 165 + 1 2.501 81069.8 1.0 1324 3983 5308 HBL1_DMSO_200M_050219_2,5309 HBL1_DMSO_200M_050219_2,5309,VAPYRPDQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5312 27.056 800.0 150840.0 25 0 36660.0 + 2628 SAYDQKNI 8 131 469.7325555905883 937.4505582479766 2 469.7326843142509 MULTI CID FTMS 0 0 0 5311 115140.8125 0.5766033835898428 10 -0.2113914489746093 1 Unmodified _ASVNNYTAV_ ENSG00000198176|ENST00000375370|TFDP1;nc|ENSG00000114126|Q14188-4|TFDP2;nc|ENSG00000114126|Q14188-7|TFDP2;nc|ENSG00000114126|Q14188-6|TFDP2;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;nc|ENSG00000114126|Q14188-2|TFDP2;nc|ENSG00000198176|Q14186-2|TFDP1;nc|ENSG00000114126|Q14188-8|TFDP2;ENSG00000114126|ENST00000489671|TFDP2;ENST00000544902.5_1_13:114277566-114294579:+|nuORF 27.628801355627647 0.1796483985696185 4 {[SA]|[TG]}Y{M(Oxidation (M))|F}G 5 6 43.015 0.0 0.0 4.5885 0.0 0.0 0.0 409.2024019830688 409.2024019830688 23.64339677331329 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 {[SA]|[TG]}Y{M(Oxidation (M))|F}G 4.5885 - 547 + 1 2.501 97229.0 0.6399999856948853 1325 3985 5311 HBL1_DMSO_200M_050219_2,5312 HBL1_DMSO_200M_050219_2,5312,ASVNNYTAV False False SAYDQKNI 27.056432 469.732684314251 2396891.0 5311.0 ENSG00000198176|ENST00000375370|TFDP1;;nc|ENSG00000114126|Q14188-4|TFDP2;;nc|ENSG00000114126|Q14188-7|TFDP2;;nc|ENSG00000114126|Q14188-6|TFDP2;;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;;nc|ENSG00000114126|Q14188-2|TFDP2;;nc|ENSG00000198176|Q14186-2|TFDP1;;nc|ENSG00000114126|Q14188-8|TFDP2;;ENSG00000114126|ENST00000489671|TFDP2;;ENST00000544902.5_1_13:114277566-114294579:+|nuORF 1.576203962167104 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5313 27.07 800.0 125140.0 25 0 39983.0 + 38995 TVREEGAGRW 10 85 580.7939495100851 1159.57334608697 2 580.7942993044853 MULTI CID FTMS 0 0 0 5311 99548.40625 0.1942623984521205 -8 0.0570335388183593 2 Unmodified _TVREEGAGRW_ REV__ENST00000529313.5_1_11:17298611-17304373:+|nuORF 27.22323531849824 0.3570408936368626 4 {[TV]|[{I|L}S]}EREQRGW 9 -1 + 75.015 0.0 0.0 6.4692 6.4692 87.468 0.0 0.0 0.0 19.488474775526186 68.5616031431335 19.488474775526186 9.208187539523747 0 2.242992819099939 1.3979400086720375 0.2742275032520141 0.0 {[TV]|[{I|L}S]}EREQRGW;{[TV]|[{I|L}S]}ERE[AG]RGW;{[CT]|[{M(Oxidation (M))|F}G]}G[RN][NP]AE[KA];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[RN][NP]AE[KA] 6.4692;5.6751;0.74825;0.33408 -;-;-;- 182 1 2.501 80987.7 0.5799999833106995 1326 3985 5311 HBL1_DMSO_200M_050219_2,5313 HBL1_DMSO_200M_050219_2,5313,TVREEGAGRW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5314 27.084 800.0 141630.0 25 0 9004.3 + 24882 MPNKHNVEV 9 142 534.2687313083761 1066.522909683552 2 534.2685424685478 MULTI CID FTMS 0 0 0 5311 86777.375 0.1780999497680556 -7 0.0495548248291015 3 Unmodified _MPNKHNVEV_ ENSG00000103342|ENST00000434724|GSPT1;ENSG00000189369|ENST00000340438|GSPT2;nc|ENSG00000103342|P15170-2|GSPT1;nc|ENSG00000103342|P15170|GSPT1 38.17557092003332 0.0854718145212029 4 {NN|[MP]|[D{I|L}]|[EV]}[KA][YV]EVM 9 4 + 38.033 0.0 0.0 3.5661 3.5661 68.306 0.0 0.0 0.0 2.3272160713441963 16.72044985140652 2.3272160713441963 3.0102999566398125 0 0.3252574989159953 0.8860566476931632 0.2302046884880938 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}[KA][YV]EVM;{NN|[MP]|[D{I|L}]|[EV]}[KA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PVM;{NN|[MP]|[D{I|L}]|[EV]}[KA][YV]MPM;{NN|[MP]|[D{I|L}]|[EV]}[KA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VPM;MPNK[{M(Oxidation (M))|F}V]{[CT]|[{M(Oxidation (M))|F}G]}K;{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}[R{M(Oxidation (M))|F}]VM;{[NV]|[RG]}H{[QN]|[E{I|L}]|[KN]}PEVM;{[NV]|[RG]}H{[QN]|[E{I|L}]|[KN]}EPVM;{[NV]|[RG]}H{[QN]|[E{I|L}]|[KN]}PMPM;{[NV]|[RG]}[{I|L}T]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PVM 3.5661;3.2839;3.1493;2.867;2.795;2.6764;1.858;1.5758;1.4412;1.2769 -;-;-;-;-;-;-;-;-;- 427 1 2.501 90221.6 0.550000011920929 1327 3985 5311 HBL1_DMSO_200M_050219_2,5314 HBL1_DMSO_200M_050219_2,5314,MPNKHNVEV True True MPNKHNVEV 27.084094 534.268542468548 5502347.0 5311.0 nc|ENSG00000103342|P15170-2|GSPT1;;ENSG00000189369|ENST00000340438|GSPT2;;nc|ENSG00000103342|P15170|GSPT1;;ENSG00000103342|ENST00000434724|GSPT1 6.19189453125 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5316 27.089 19.0 2648500.0 25 0 174980.0 + 28907 QAPPPPQQV 9 88 481.2586875982422 960.5028222632844 2 481.2588378787041 MULTI CID FTMS 0 0 0 5315 3215551.5 0.544557530595201 40 -0.9083175659179688 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 54.773552608820026 0.0299037012502309 4 [QA]PPP 5 4 43.205 0.0 0.0 4.4982 0.0 0.0 0.0 467.22529467133165 467.22529467133165 31.422197766642608 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.7302046884880937 + [QA]PPP 4.4982 + + 214 1 2.498 43300.1 1.0 1328 3986 5315 HBL1_DMSO_200M_050219_2,5316 HBL1_DMSO_200M_050219_2,5316,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5317 27.092 167.0 354550.0 25 0 50548.0 + 39195 TYQNTAQTV 9 70 513.2482128490353 1024.4818727648706 2 513.2486450076103 MULTI CID FTMS 0 0 0 5315 210980.765625 0.5493864245891066 7 -0.1470317840576172 2 Unmodified _TYQNTAQTV_ ENSG00000198218|ENST00000395443|QRICH1;ENST00000479449.1_1_3:49070551-49094468:-|nuORF 15.847184025352805 0.4077185912009129 4 PT{[QN]|[E{I|L}]|[KN]}[HT]TV 8 4 21.604 0.0 0.0 2.1088 0.0 0.0 128.00947267392615 0.0 128.00947267392615 0.0 4.668212980798501 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 PT{[QN]|[E{I|L}]|[KN]}[HT]TV 2.1088 - 129 + 1 2.498 54062.5 1.0 1329 3986 5315 HBL1_DMSO_200M_050219_2,5317 HBL1_DMSO_200M_050219_2,5317,TYQNTAQTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5318 27.094 73.0 815530.0 25 0 265320.0 42687 VTWEVLEGEV 10 57 387.53177347641486 1159.5734910294443 3 387.5316039919853 MULTI CID FTMS 0 0 0 5315 548725.9375 0.3570820529197659 -7 0.0896186828613281 3 Unmodified _VTWEVLEGEV_ ENSG00000138385|ENST00000260956|SSB;ENST00000438469.2_1_1:146553889-146554591:-|nuORF 17.11289562659939 0.5604042439455784 4 VTERE 5 6 57.295 0.0 0.0 4.941 0.0 0.0 0.0 542.2528170221311 542.2528170221311 44.53065917579405 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.4247425010840047 VTERE 4.941 - 87 + 1 2.498 58360.3 1.0 1330 3986 5315 HBL1_DMSO_200M_050219_2,5318 HBL1_DMSO_200M_050219_2,5318,VTWEVLEGEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5319 27.096 107.0 421140.0 25 0 51567.0 -1 KPVIMPPEV 9 68 513.290499893586 1024.566446853972 2 513.2907592654228 MULTI CID FTMS 0 0 0 5315 359323.09375 0.686456442942274 -3 0.0577239990234375 4 Oxidation (M) _KPVIM(Oxidation (M))PPEV_ ENSG00000137992|ENST00000370132|DBT 11.640296217721598 0.521594087909532 4 KPT 3 -1 35.445 0.0 0.0 3.4595 0.0 0.0 0.0 695.3470885033123 695.3470885033123 22.34636880228201 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 KPT 3.4595 - 48 + 1 2.498 40496.5 1.0 1331 3986 5315 HBL1_DMSO_200M_050219_2,5319 HBL1_DMSO_200M_050219_2,5319,KPVIMPPEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5321 27.106 435.0 275170.0 25 0 38508.0 28920 QAPTEQRPG 9 119 492.2496543004195 982.484755667639 2 492.2498046755791 MULTI CID FTMS 0 0 0 5320 177227.53125 0.5524586650664896 32 -0.7401199340820312 1 Unmodified _QAPTEQRPG_ ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA;ENSG00000198670|ENST00000316300|LPA 25.399314129420983 0.2080152500878129 4 [QA]PPP{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 9 5 + 44.925 0.0 0.0 4.5726 4.5726 82.186 0.0 0.0 0.0 31.15249527882538 3.1948095894621176 3.1948095894621176 13.397473216301549 0 0.6747425010840047 1.6989700043360187 0.0 0.3494850021680094 [QA]PPP{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[QA]PP[RN]{[DS]|[MA]|[CV]|TT}V;[QA]S[R{M(Oxidation (M))|F}][{M(Oxidation (M))|F}E]V;[QA][YK]{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{[NV]|[RG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{[YD]|[{M(Oxidation (M))|F}M]}PV;{[QV]|[N{I|L}]|[RA]|[KV]}[HQ]P[{M(Oxidation (M))|F}E]V;[{I|L}T]{[YD]|[{M(Oxidation (M))|F}M]}P[{M(Oxidation (M))|F}E]V 4.5726;3.209;2.8116;1.5997;1.344;0.86305;0.65584;0.22228 -;-;-;-;-;-;-;- 223 + 1 2.498 92789.0 1.0 1332 3987 5320 HBL1_DMSO_200M_050219_2,5321 HBL1_DMSO_200M_050219_2,5321,QAPTEQRPG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5322 27.113 372.0 305540.0 25 0 21552.0 + + 10833 GAAGPLRGA 9 132 385.2196209826473 768.4246890320946 2 385.2193786501884 MULTI CID FTMS 0 0 0 5320 263495.15625 0.8619731000565527 -2 0.0560340881347656 2 Unmodified _GAAGPLQR_ ENST00000440812.7_1_1:183441537-183441705:+|nuORF 46.92087301778293 0.1537303740847981 4 [AG]AGP{I|L}RQ 8 -1 + 59.277 0.0 0.0 7.7141 7.7141 86.934 0.0 0.0 0.0 5.568109453757657 9.262137858390815 5.568109453757657 5.568109453757657 0 1.1549471895720984 1.6989700043360187 0.0 0.3807196863200844 [AG]AGP{I|L}RQ;QQP{I|L}RQ;[AG]AGKK[HT];QQKK[HT];[AG]QKK[HT];[AG]KKQ[HT];[AG]GAKK[HT];[AG]KK[AG][HT];[AG]KK[HT]Q;AAGGKK[HT] 7.7141;6.9894;5.6914;4.9667;3.907;3.4413;3.3367;2.227;1.9897;1.0822 -;-;-;-;-;-;-;-;-;- 282 + 1 2.498 93620.5 1.0 1333 3987 5320 HBL1_DMSO_200M_050219_2,5322 HBL1_DMSO_200M_050219_2,5322,GAAGPLQR False False GAAGPLRGA 27.113065 385.219378650188 2491680.0 5320.0 ENST00000440812.7_1_1:183441537-183441705:+|nuORF 2.979161739349365 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5323 27.127 800.0 178240.0 25 0 16839.0 -1 HHCLPWAYPM 10 121 437.8632179120823 1310.5678243364468 3 437.8634521365166 MULTI CID FTMS 0 0 0 5320 151354.5625 0.7724023129587905 34 -0.8011207580566406 3 Carbamidomethyl (C) _HHC(Carbamidomethyl (C))LPWAYPM_ ENST00000533086.5_1_19:15225833-15226058:-|nuORF 4.189502756095605 0.7072575900373772 4 [{M(Oxidation (M))|F}V][KP]RQSC{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C 11 -1 + 26.22 0.0 0.0 2.0006 2.0006 67.979 0.0 0.0 0.0 0.4831032296932562 14.453647886918093 0.4831032296932562 4.476763868100843 0 0.3807196863200844 0.0 0.0 0.3494850021680094 [{M(Oxidation (M))|F}V][KP]RQSC{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C;[{M(Oxidation (M))|F}V][KP]RQC(Carbamidomethyl (C))[MD]M;[R{M(Oxidation (M))|F}][PA]RQSC{[ES]|[DT]|[{I|L}C]}M;[{M(Oxidation (M))|F}V][KP]RQC(Carbamidomethyl (C))[C(Carbamidomethyl (C))N]C;[R{M(Oxidation (M))|F}][PA]RQSC{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C;[R{M(Oxidation (M))|F}][PA]RQC(Carbamidomethyl (C))[MD]M 2.0006;1.659;1.5802;1.4249;1.3461;1.0045 -;-;-;-;-;- 278 1 2.498 115039.7 0.5799999833106995 1334 3987 5320 HBL1_DMSO_200M_050219_2,5323 HBL1_DMSO_200M_050219_2,5323,HHCLPWAYPM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5324 27.136 548.0 224960.0 25 0 44877.0 43020 VWLPRPSL 8 113 484.2883248848583 966.5620968365166 2 484.2885925173759 MULTI CID FTMS 0 0 0 5320 89944.828125 0.4930458449026074 -3 0.0597991943359375 4 Unmodified _VWLPRPSL_ ENST00000399683.7_1_20:3734265-3734637:-|nuORF 21.74664581756881 0.5868176546531598 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P 3 6 28.072 0.0 0.0 2.9043 0.0 0.0 0.0 606.3366793268186 606.3366793268186 13.469968281959762 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P 2.9043 - 223 + 1 2.498 96695.0 1.0 1335 3987 5320 HBL1_DMSO_200M_050219_2,5324 HBL1_DMSO_200M_050219_2,5324,VWLPRPSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5326 27.142 138.0 760700.0 25 0 71934.0 + 8166 EPPPVKQV 8 109 447.2580906404142 892.5016283476284 2 447.2583801150322 MULTI CID FTMS 0 0 0 5325 360394.5625 0.3236606195670794 52 -1.026987075805664 1 Unmodified _EPPPVKQV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 30.22481116460888 0.4082965392918993 4 [EP]P 3 5 26.21 0.0 0.0 2.9367 0.0 0.0 0.0 566.3295382135374 566.3295382135374 15.24104976468614 0.0 0.0 0.0 0 0.2742275032520141 1.3010299956639813 0.0 0.0 + [EP]P 2.9367 + + 55 + 1 2.498 84621.8 1.0 1336 3988 5325 HBL1_DMSO_200M_050219_2,5326 HBL1_DMSO_200M_050219_2,5326,EPPPVKQV False True EPPPVKQV 27.141694 447.2586 313761500.0 5325.0 ENST00000466404.5_1_19:54621832-54631576:+|nuORF;;nc|ENSG00000105618|Q8WWY3-3|PRPF31;;ENSG00000105618|ENST00000321030|PRPF31;;nc|ENSG00000105618|Q8WWY3-4|PRPF31 4.339515805244446 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5327 27.156 800.0 107110.0 25 0 4905.8 + 7370 EGDVQWNVF 9 114 547.2508470691732 1092.4871412051464 2 547.2516357302666 MULTI CID FTMS 0 0 0 5325 58522.5234375 0.3345927396484787 19 -0.4564743041992187 2 Unmodified _EGDVQWNVF_ REV__ENSG00000130204|ENST00000426677|TOMM40;REV__ENST00000448659.1_1_2:132481246-132481432:-|nuORF;REV__nc|ENSG00000130204|O96008-2|TOMM40 19.256988751693697 0.3154191944385105 4 {[DA]|[EG]}D{I|L}N{M(Oxidation (M))|F}[RD]K 9 -1 + 56.466 0.0 0.0 5.1686 5.1686 82.2 0.0 0.0 0.0 42.25781316231988 0.8666921368747538 0.8666921368747538 9.208187539523747 0 0.9247425010840048 2.0 0.3494850021680094 0.7614393726401688 {[DA]|[EG]}D{I|L}N{M(Oxidation (M))|F}[RD]K;{[DA]|[EG]}D{I|L}GG{M(Oxidation (M))|F}[RD]K;WD{I|L}N[WR]{[CT]|[{M(Oxidation (M))|F}G]};{[DA]|[EG]}D{I|L}HHEEK;WD{I|L}GG[WR]{[CT]|[{M(Oxidation (M))|F}G]};{[DA]|[EG]}D[YQ][WK][PA];WD{I|L}VVEE{[CT]|[{M(Oxidation (M))|F}G]};WD{I|L}HH{[MS]|[{M(Oxidation (M))|F}A]}[PA];{[DA]|[EG]}[YE]N[WK][PA];[VS][WK]N{I|L}D[EC] 5.1686;4.3257;3.1019;2.9176;2.2541;1.4853;1.2372;1.0954;1.0276;0.63359 -;-;-;-;-;-;-;-;-;- 466 + 1 2.498 69820.6 0.5 1337 3988 5325 HBL1_DMSO_200M_050219_2,5327 HBL1_DMSO_200M_050219_2,5327,EGDVQWNVF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5328 27.159 196.0 511660.0 25 0 47763.0 + 30 AAAPPAKEI 9 86 434.2503355951893 866.4861182571786 2 434.2504760622978 MULTI CID FTMS 0 0 0 5325 301405.53125 0.0398164449666312 -15 0.1815910339355468 3 Unmodified _AAAPPAKEI_ ENSG00000166851|ENST00000300093|PLK1 22.736283301280096 0.2418982879461534 4 [PA]KEP 5 5 30.445 0.0 0.0 3.5137 0.0 0.0 0.0 341.1807953414162 341.1807953414162 1.2641002136337676 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.4247425010840047 0.0 [PA]KEP 3.5137 - 116 1 2.498 82084.3 1.0 1338 3988 5325 HBL1_DMSO_200M_050219_2,5328 HBL1_DMSO_200M_050219_2,5328,AAAPPAKEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5329 27.173 800.0 81819.0 25 0 20400.0 -1 0 40 1113.136001052174 3336.386173756722 3 1113.471606433392 MULTI CID FTMS 0 0 0 5325 126523.1953125 0.4159734789494156 -8 0.1233348846435546 4 4 {M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]YG 5 -1 12.218 0.0 0.0 0.36622 0.0 0.0 1311.4603447545717 1331.6695069852267 2643.129851739798 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]YG 0.36622 - 19 + 1 2.498 62246.4 0.4000000059604645 1339 3988 5325 HBL1_DMSO_200M_050219_2,5329 HBL1_DMSO_200M_050219_2,5329, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5330 27.187 800.0 151610.0 25 0 26481.0 7701 EKWNADHSK 9 106 557.765123717972 1113.5156945027438 2 557.7650634646416 MULTI CID FTMS 0 0 0 5325 83694.875 0.490081975365029 -10 0.1458549499511718 5 Unmodified _EKWNADHSK_ ENSG00000066455|ENST00000163416|GOLGA5;nc|ENSG00000066455|Q8TBA6-2|GOLGA5 11.640296217721598 0.521594087909532 4 YT{M(Oxidation (M))|F}K 4 8 26.541 0.0 0.0 2.3835 0.0 0.0 556.2519748755939 0.0 556.2519748755939 0.0 9.62971863081876 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.2742275032520141 YT{M(Oxidation (M))|F}K 2.3835 - 185 + 1 2.498 99852.4 0.4699999988079071 1340 3988 5325 HBL1_DMSO_200M_050219_2,5330 HBL1_DMSO_200M_050219_2,5330,EKWNADHSK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5333 27.196 56.0 985030.0 25 0 126740.0 + 1173 AHREVPEMV 9 85 356.5149189928889 1066.5229275788668 3 356.5147277712822 MULTI CID FTMS 0 0 0 5332 692809.75 0.8640519371715996 -3 0.0947170257568359 1 Unmodified _AHREVPEMV_ REV__ENST00000454011.6_2_3:49412952-49412994:-|nuORF 5.731851221503515 0.7145881442174411 4 PEVM 4 -1 31.938 0.0 0.0 2.9946 0.0 0.0 592.3120594709 0.0 592.3120594709 0.0 17.95880017344075 0.0 0.0 0 0.0 0.0 0.0 0.0 PEVM 2.9946 - 18 1 2.498 55802.5 1.0 1341 3990 5332 HBL1_DMSO_200M_050219_2,5333 HBL1_DMSO_200M_050219_2,5333,AHREVPEMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5334 27.209 800.0 264050.0 25 0 20993.0 + 17678 KPTGARPSAL 10 116 499.29326404651647 996.571975159833 2 499.2932006716728 MULTI CID FTMS 0 0 0 5332 201539.4375 0.4178844153652883 18 -0.4080009460449219 2 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 31.26834338654808 0.266153677697784 4 KPTG 4 6 49.24 0.0 0.0 4.941 0.0 0.0 0.0 610.3304537408811 610.3304537408811 31.281446971601312 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 + KPTG 4.941 + + 231 + 1 2.498 163993.7 0.8500000238418579 1342 3990 5332 HBL1_DMSO_200M_050219_2,5334 HBL1_DMSO_200M_050219_2,5334,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5335 27.223 800.0 112800.0 25 0 31517.0 + -1 TIELCCHYT 9 115 570.2443494033906 1138.4741458735812 2 570.7466308474541 MULTI CID FTMS 0 0 0 5332 105661.1171875 0.6147741459105857 -10 0.1777858734130859 3 Carbamidomethyl (C) _TIELC(Carbamidomethyl (C))CHYT_ REV__ENSG00000176225|ENST00000640769|RTTN;REV__nc|ENSG00000176225|Q86VV8-3|RTTN;REV__nc|ENSG00000176225|Q86VV8-4|RTTN 11.640296217721598 0.521594087909532 4 {[QN]|[E{I|L}]|[KN]}W 3 -1 22.76 0.0 0.0 1.9991 0.0 0.0 0.0 707.2515255945374 707.2515255945374 4.660677999045717 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.1989700043360188 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}W 1.9991 - 546 1 2.498 73030.0 0.6000000238418579 1343 3990 5332 HBL1_DMSO_200M_050219_2,5335 HBL1_DMSO_200M_050219_2,5335,TIELCCHYT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5339 27.248 800.0 104340.0 25 0 13523.0 20165 LKQENGIL 8 105 457.7690900478302 913.5236271624603 2 457.7690612673759 MULTI CID FTMS 0 0 0 5338 87517.5703125 0.7290655548913568 -4 0.0442466735839843 1 Unmodified _LKQENGIL_ ENSG00000126777|ENST00000395314|KTN1;ENST00000554567.1_2_14:56046961-56101257:+|nuORF;nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1 36.04419817259434 0.3004715606373109 4 K{I|L}AADN 6 7 66.301 0.0 0.0 7.2578 0.0 0.0 0.0 298.17795740299067 298.17795740299067 56.69719459289499 0.0 0.0 0.0 0 1.110924374808178 1.0969100130080565 0.0 0.7302046884880937 K{I|L}AADN 7.2578 - 492 + 1 2.498 70329.2 0.5899999737739563 1344 3993 5338 HBL1_DMSO_200M_050219_2,5339 HBL1_DMSO_200M_050219_2,5339,LKQENGIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5342 27.256 44.0 1134800.0 25 0 171170.0 + -1 LTGWPLTMK 9 76 531.7840978546196 1061.5536427760392 2 531.7843505740166 MULTI CID FTMS 0 0 0 5341 984927.3125 0.6178788035383856 7 -0.1859645843505859 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 27.628801355627647 0.1796483985696185 4 K[HQ][{I|L}P]T{M(Oxidation (M))|F}K 8 -1 38.963 0.0 0.0 3.6703 0.0 0.0 63.9972448360988 0.0 63.9972448360988 0.0 24.186296826175 0.0 0.0 0 1.5 0.0 0.8494850021680094 0.2614393726401688 K[HQ][{I|L}P]T{M(Oxidation (M))|F}K 3.6703 - 90 + 1 2.498 42789.1 1.0 1345 3995 5341 HBL1_DMSO_200M_050219_2,5342 HBL1_DMSO_200M_050219_2,5342,LTGWPLTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5343 27.27 800.0 167090.0 25 0 9028.7 + 34540 SPAPPPQQV 9 142 460.7456704744902 919.4767880157804 2 460.7455627322197 MULTI CID FTMS 0 0 0 5341 121919.9375 0.470995130196338 28 -0.6581611633300781 2 Unmodified _SPAPPPQQV_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 56.17704186161178 0.0281986971544335 4 [PS]APPPQQV 9 0 + 55.555 0.0 0.0 6.042 6.042 83.877 0.0 0.0 0.0 7.947203518168372 9.335295873671754 7.947203518168372 7.947203518168372 0 1.2817183090963749 1.2218487496163564 0.2614393726401688 0.0 + + [PS]APPPQQV;[PA]SPPPQQV;[PS]PAPPQQV;[PS]APPP[AG]QV;[PS]APPG[PA]QV;[PA]SPPP[AG]QV;[PS]PAPP[AG]QV;[PS]PPAPQQV;{[HG]|PP}SAPPQQV;[PA]SPPG[PA]QV 6.042;5.1777;5.1368;5.0406;4.1943;4.1762;4.1354;3.7189;3.4356;3.3299 +;-;-;-;-;-;-;-;-;- + 1204 1 2.498 105618.0 0.6800000071525574 1346 3995 5341 HBL1_DMSO_200M_050219_2,5343 HBL1_DMSO_200M_050219_2,5343,SPAPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5344 27.273 175.0 419680.0 25 0 45117.0 + 4195 DAPKAGQL 8 100 400.2187998363037 798.4230467394075 2 400.2192565798759 MULTI CID FTMS 0 0 0 5341 345676.0625 0.4486966436120959 -7 0.115091323852539 3 Unmodified _DAPKAGQL_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 40.44857923139169 0.2267865117615937 4 {[DA]|[EG]}PD[R{I|L}]{I|L} 7 4 + 49.186 0.0 0.0 6.1604 6.1604 80.077 0.0 0.0 0.0 25.668563304579024 15.016894462103991 15.016894462103991 4.032125137753432 0 0.4247425010840047 2.0 0.0 0.8494850021680094 {[DA]|[EG]}PD[R{I|L}]{I|L};{[DA]|[EG]}PKQQ{I|L};{[DA]|[EG]}[{I|L}A]KP{[QG]|[NA]};{[SA]|[TG]}[Q{I|L}]VP{[QG]|[NA]};[Q{I|L}]{[SA]|[TG]}VP{[QG]|[NA]};{[QG]|[NA]}[{I|L}T]VP{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}QKP{[QG]|[NA]};[Q{I|L}]EKP{[QG]|[NA]} 6.1604;5.6554;3.2107;2.5084;0.89426;0.79509;0.65056;0.3727 -;-;-;-;-;-;-;- 97 + 1 2.498 63231.5 1.0 1347 3995 5341 HBL1_DMSO_200M_050219_2,5344 HBL1_DMSO_200M_050219_2,5344,DAPKAGQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5345 27.277 162.0 577900.0 25 0 60909.0 + 44872 YPPHVQKV 8 99 323.1838573595554 966.5297426788665 3 323.1833984255791 MULTI CID FTMS 0 0 0 5341 296616.84375 0.7738751575900839 59 -1.013885498046875 4 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 23.1484247019978 0.5573009939494978 4 YPPH{[QV]|[N{I|L}]|[RA]|[KV]}KV 8 0 + 44.508 0.0 0.0 4.6049 4.6049 74.33 0.0 0.0 0.0 28.884030681983788 4.503187623076954 4.503187623076954 4.503187623076954 0 0.0 1.3979400086720375 0.0 0.2215141619232908 + + YPPH{[QV]|[N{I|L}]|[RA]|[KV]}KV;YPPH{[QV]|[N{I|L}]|[RA]|[KV]}VK;YV[MT]{[QV]|[N{I|L}]|[RA]|[KV]}KV;YV[MT]{[QV]|[N{I|L}]|[RA]|[KV]}VK;YV[MT][R{I|L}]GK 4.6049;4.139;1.0364;0.57047;0.52348 +;-;-;-;- + 98 + 1 2.498 79055.4 1.0 1348 3995 5341 HBL1_DMSO_200M_050219_2,5345 HBL1_DMSO_200M_050219_2,5345,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5347 27.281 20.0 2259500.0 25 0 443920.0 + 36354 SYPHHATQL 9 84 527.2591937562819 1052.5038345793637 2 527.2595092654228 MULTI CID FTMS 0 0 0 5346 2574208.5 0.3548068995117734 8 -0.2309741973876953 1 Unmodified _SYPHHATQL_ ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 49.93300154707207 0.0405168250806675 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 9 4 + 28.394 0.0 0.0 2.6978 2.6978 62.475 0.0 0.0 0.0 0.9691001300805624 3.2217847488956544 0.9691001300805624 0.9691001300805624 0 0.0 0.0 0.8494850021680094 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[QN]|[E{I|L}]|[KN]}EATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[{M(Oxidation (M))|F}C]|[YS]}[RH]Q{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[QN]|[E{I|L}]|[KN]}EAT[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HAT[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HM]{I|L}[AG][RH][MT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HAT{[{M(Oxidation (M))|F}C]|[YS]}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}EAT{[{M(Oxidation (M))|F}C]|[YS]}[Q{I|L}];[HM]{I|L}Q{[VA]|[{I|L}G]}[SG][NP];{[{M(Oxidation (M))|F}C]|[YS]}[RH]{[{M(Oxidation (M))|F}C]|[YS]}[Q{I|L}] 2.6978;2.6057;2.1508;1.7308;1.4193;1.2707;0.86647;0.77439;0.35794;0.31947 -;-;-;-;-;-;-;-;-;- 157 1 2.498 41495.4 1.0 1349 3996 5346 HBL1_DMSO_200M_050219_2,5347 HBL1_DMSO_200M_050219_2,5347,SYPHHATQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5348 27.284 101.0 584610.0 25 0 92389.0 + 6631 EATIEQSYL 9 76 351.84203768145 1052.50428364455 3 351.8418151736259 MULTI CID FTMS 0 0 0 5346 551241.6875 0.3661103172605436 10 -0.2797508239746094 2 Unmodified _EATIEQSYL_ REV__ENSG00000159210|ENST00000502492|SNF8;REV__ENST00000509989.5_1_17:47007839-47014253:-|nuORF;REV__ENST00000514089.5_1_17:47007839-47013524:-|nuORF;REV__nc|ENSG00000159210|Q96H20-2|SNF8 11.640296217721598 0.521594087909532 4 QPHC(Carbamidomethyl (C)){I|L} 5 -1 17.625 0.0 0.0 1.6745 0.0 0.0 399.20333272206193 0.0 399.20333272206193 0.0 2.919562702124457 0.0 0.0 0 0.0 0.0 0.0 0.0 QPHC(Carbamidomethyl (C)){I|L} 1.6745 - 265 + 1 2.498 54571.9 1.0 1350 3996 5346 HBL1_DMSO_200M_050219_2,5348 HBL1_DMSO_200M_050219_2,5348,EATIEQSYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5349 27.293 527.0 178060.0 25 0 55262.0 + 41899 VQDENVRGV 9 103 508.2620339394308 1014.5095149456616 2 508.2618591189384 MULTI CID FTMS 0 0 0 5346 97105.546875 1.0 0 0.0 3 Unmodified _VQDPLLCDL_ ENST00000426530.2_1_11:47587445-47593178:+|nuORF;ENSG00000110536|ENST00000326674|PTPMT1;ENST00000534775.1_1_11:47587445-47593178:+|nuORF;nc|ENSG00000110536|Q8WUK0-2|PTPMT1 39.957323273325 0.0756908302845263 4 VQDE 4 6 51.753 0.0 0.0 5.1013 0.0 0.0 0.0 540.2909029596311 540.2909029596311 30.616549659805138 0.0 0.0 0.0 0 0.5 0.958607314841775 0.9247425010840048 0.4247425010840047 VQDE 5.1013 - 111 + 1 2.498 78637.0 1.0 1351 3996 5346 HBL1_DMSO_200M_050219_2,5349 HBL1_DMSO_200M_050219_2,5349,VQDPLLCDL True False VQDENVRGV 27.292816 508.261859118938 547478.5 5346.0 ENST00000426530.2_1_11:47587445-47593178:+|nuORF;;ENSG00000110536|ENST00000326674|PTPMT1;;ENST00000534775.1_1_11:47587445-47593178:+|nuORF;;nc|ENSG00000110536|Q8WUK0-2|PTPMT1 6.720505714416504 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5350 27.307 800.0 125310.0 25 0 17036.0 + 13805 HTDVSKTSLK 10 95 558.3067220915653 1114.5988912499306 2 558.3070556521416 MULTI CID FTMS 0 0 0 5346 92842.9609375 0.8950447883947464 3 -0.0402488708496093 4 Unmodified _HTDVSKTSLK_ ENSG00000164128|ENST00000296533|NPY1R 24.99096001346401 0.4071966087057876 4 HT[YR]K[WP]K 8 6 + 37.572 0.0 0.0 3.3709 3.3709 80.652 0.0 0.0 0.0 16.131674952134105 3.363650028014433 3.363650028014433 37.57183756753818 0 1.0 1.3010299956639813 0.0 0.25 HT[YR]K[WP]K 3.3709 - 98 + 1 2.498 82698.2 0.4799999892711639 1352 3996 5346 HBL1_DMSO_200M_050219_2,5350 HBL1_DMSO_200M_050219_2,5350,HTDVSKTSLK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5353 27.315 67.0 1031300.0 25 0 95604.0 + 17855 KQLEDGRTL 9 91 530.2933152612068 1058.5720775892134 2 530.2936279177666 MULTI CID FTMS 0 0 0 5352 912764.375 0.3268338640383586 -4 0.0630321502685546 1 Unmodified _KQLEDGRTL_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF 51.41523569358685 0.0372669606867193 4 KQ{I|L}ED[K{I|L}]W 8 4 + 76.865 0.0 0.0 7.2612 7.2612 90.924 0.0 0.0 0.0 62.88516148025116 7.166987712964499 7.166987712964499 9.262137858390815 0 1.9876954943324543 0.0 0.805462187404089 0.3807196863200844 KQ{I|L}ED[K{I|L}]W;K[AG]{I|L}ED[K{I|L}]W;[AG]K{I|L}ED[W{I|L}]K;[KQ]{I|L}ED[W{I|L}]K;[Q{I|L}]KED[W{I|L}]K;[AG]{I|L}KED[W{I|L}]K;[Q{I|L}]WW[W{I|L}]K;[AG]{I|L}WW[W{I|L}]K;[VP][C(Carbamidomethyl (C))R]T[W{I|L}]K 7.2612;6.3862;4.605;4.1007;3.8131;3.2844;1.2442;0.70904;0.45751 -;-;-;-;-;-;-;-;- 143 + 1 2.496 56316.3 1.0 1353 3998 5352 HBL1_DMSO_200M_050219_2,5353 HBL1_DMSO_200M_050219_2,5353,KQLEDGRTL True True KQLEDGRTL 27.315328 530.293627917767 56945421.0 5352.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC 5.566060225168864 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5354 27.317 67.0 1340000.0 25 0 240760.0 + 17857 KQLEDGRTL 9 97 353.8650587557466 1058.5733468674398 3 353.8644897341728 MULTI CID FTMS 0 0 0 5352 870421.0625 0.435217957156394 -4 0.0630321502685546 2 Unmodified _KQLEDGRTL_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF 21.53697664764585 0.2571576504437394 4 [Q{I|L}]KED{I|L}KW 8 6 [Q{I|L}]KE + + 17.155 12.287 2.4658 1.6206 1.6206 44.388 0.0 0.0 0.0 0.0 4.868111346216608 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 [Q{I|L}]KED{I|L}KW 1.6206 - 63 + 1 2.496 77437.7 1.0 1354 3998 5352 HBL1_DMSO_200M_050219_2,5354 HBL1_DMSO_200M_050219_2,5354,KQLEDGRTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5356 27.322 147.0 475510.0 25 0 156710.0 + -1 RCVWRVGW 8 58 580.7939495100851 1159.57334608697 2 580.7942993044853 MULTI CID FTMS 0 0 0 5355 434928.34375 0.848735066631801 6 -0.1946067810058593 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))RC(Carbamidomethyl (C))VWRVGW_ REV__ENST00000368223.3_1_1:156639735-156639774:-|nuORF 10.183394434864962 0.7604730176254005 4 GW 2 -1 18.979 0.0 0.0 1.6368 0.0 0.0 898.4614208934139 0.0 898.4614208934139 0.0 15.880456295278409 0.0 0.0 0 0.5 0.0 0.0 0.0 GW 1.6368 + + 15 + 1 2.496 56394.1 1.0 1355 3999 5355 HBL1_DMSO_200M_050219_2,5356 HBL1_DMSO_200M_050219_2,5356,RCVWRVGW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5357 27.326 167.0 319150.0 25 0 36824.0 + -1 LPVWYGQC 8 70 511.74108913238666 1021.4676253315732 2 511.7416259646416 MULTI CID FTMS 0 0 0 5355 367186.96875 0.1257886585612548 -7 0.0896720886230468 2 Carbamidomethyl (C) _LPVWYGQC(Carbamidomethyl (C))_ REV__ENST00000007708.7_1_17:48187616-48187931:+|nuORF 19.438996006549623 0.6237395211498085 4 {I|L}PSSAA 6 -1 63.448 0.0 0.0 6.2115 0.0 0.0 0.0 492.1724947565063 492.1724947565063 39.97547537623447 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PSSAA 6.2115 - 115 + 1 2.496 52019.6 1.0 1356 3999 5355 HBL1_DMSO_200M_050219_2,5357 HBL1_DMSO_200M_050219_2,5357,LPVWYGQC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5358 27.331 266.0 245760.0 25 0 17826.0 + 24883 MPNKHNVEV 9 105 534.2687313083761 1066.522909683552 2 534.2691528201103 MULTI CID FTMS 0 0 0 5355 296963.28125 0.6094808177083253 7 -0.239501953125 3 Unmodified _MPNKHNVEV_ ENSG00000103342|ENST00000434724|GSPT1;ENSG00000189369|ENST00000340438|GSPT2;nc|ENSG00000103342|P15170-2|GSPT1;nc|ENSG00000103342|P15170|GSPT1 45.739877483867886 0.0497104363764649 4 MPNKHNVEV 9 0 + 67.366 0.0 0.0 6.3164 6.3164 86.878 0.0 0.0 0.0 32.056249065591814 24.61381036606788 24.61381036606788 9.208187539523747 0 1.3539171939081172 1.5228787452803376 0.9247425010840048 0.0 + + MPNKHNVEV;MPGGKHNVEV;[{M(Oxidation (M))|F}T]EV[TA][TA]EV;{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KA]VEV;{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KA]PMV;[KG][NS]E[R{M(Oxidation (M))|F}]MV;{[QN]|[E{I|L}]|[KN]}[SG]E[R{M(Oxidation (M))|F}]MV;{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[R{M(Oxidation (M))|F}]MV;[KG]G[SG]E[R{M(Oxidation (M))|F}]MV;{[QN]|[E{I|L}]|[KN]}{[CA]|SS}V[R{M(Oxidation (M))|F}]MV 6.3164;5.4531;2.1823;1.2113;0.86088;0.74627;0.61659;0.57369;0.3823;0.33434 +;-;-;-;-;-;-;-;-;- + 227 + 1 2.496 53796.1 1.0 1357 3999 5355 HBL1_DMSO_200M_050219_2,5358 HBL1_DMSO_200M_050219_2,5358,MPNKHNVEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5360 27.347 800.0 225000.0 25 0 24837.0 + 38246 TPVLRRAP 8 139 455.2848854100624 908.5552178869248 2 455.2850829958916 MULTI CID FTMS 0 0 0 5359 122815.46875 0.1192627723851874 -6 0.0829544067382812 1 Unmodified _TPVLRRAP_ REV__ENST00000565420.5_1_16:18801379-18801577:-|nuORF 32.116972079565 0.368454113111938 4 TPVK 4 -1 49.166 0.0 0.0 5.4115 0.0 0.0 0.0 480.2678316705688 480.2678316705688 29.70229931969351 0.0 0.0 0.0 0 0.4731975075880328 2.0 0.0 0.8494850021680094 TPVK 5.4115 - 104 + 1 2.496 140633.7 0.449999988079071 1358 4000 5359 HBL1_DMSO_200M_050219_2,5360 HBL1_DMSO_200M_050219_2,5360,TPVLRRAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5361 27.349 106.0 1311900.0 25 0 177460.0 + 38253 TPVPARLR 8 93 303.8594131764284 908.5564101294852 3 303.8591491580009 MULTI CID FTMS 0 0 0 5359 404221.03125 0.1246626177325043 -5 0.0789947509765625 2 Unmodified _TPVPLRAR_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 23.1484247019978 0.5573009939494978 4 TPVK 4 5 55.79 0.0 0.0 6.1405 0.0 0.0 0.0 480.26662881587777 480.26662881587777 44.82061891068248 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.3807196863200844 TPVK 6.1405 - 67 + 1 2.496 117667.6 1.0 1359 4000 5359 HBL1_DMSO_200M_050219_2,5361 HBL1_DMSO_200M_050219_2,5361,TPVPLRAR False False TPVPARLR 27.349053 303.859149158001 40740184.0 5359.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 1.339940865834554 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5362 27.363 800.0 168720.0 25 0 20095.0 25690 NHSEGGGV 8 164 378.6673020571695 755.320051181139 2 378.6667968630791 MULTI CID FTMS 0 0 0 5359 89823.5 0.7731497583059711 -3 0.0239028930664062 3 Unmodified _NHSEGGGV_ ENSG00000132471|ENST00000254806|WBP2;ENST00000416574.6_1_17:73843478-73851408:-|nuORF;ENST00000587374.5_3_17:73845777-73851378:-|nuORF;ENST00000589241.5_1_17:73851318-73851408:-|nuORF;ENST00000589834.1_1_17:73845679-73851408:-|nuORF;ENST00000590450.5_1_17:73845072-73851378:-|nuORF;ENST00000592802.1_1_17:73847561-73851408:-|nuORF;nc|ENSG00000132471|Q969T9-2|WBP2 2.889219685676258 0.8067950007271085 4 V 1 7 12.474 0.0 0.0 1.6515 0.0 0.0 638.2405738025242 0.0 638.2405738025242 0.0 -3.895840698002999 -3.895840698002999 0.0 0 0.0 0.0 0.0 0.0 + V 1.6515 + + 56 + 1 2.496 104872.5 0.8999999761581421 1360 4000 5359 HBL1_DMSO_200M_050219_2,5362 HBL1_DMSO_200M_050219_2,5362,NHSEGGGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5363 27.371 435.0 299200.0 25 0 25431.0 + 27147 PFPLGTPRL 9 149 333.19832133429645 996.5731346030892 3 333.1974059939384 MULTI CID FTMS 0 0 0 5359 87537.5390625 0.0947955291264649 -9 0.1072006225585937 4 Unmodified _PFPLGTPRL_ REV__ENST00000595775.5_1_19:42817488-42818494:+|nuORF 36.04419817259434 0.0971720506436186 4 [{I|L}A][QA]QTPR{I|L} 9 -1 + 45.573 0.0 0.0 4.573 4.573 79.747 0.0 0.0 0.0 7.904849854573683 33.50314908331793 7.904849854573683 9.208187539523747 0 0.3807196863200844 1.3979400086720375 0.6694451763165201 0.0 [{I|L}A][QA]QTPR{I|L};[{I|L}A][QA][AG]TPR{I|L};[KP]{[SA]|[TG]}QTPR{I|L};[KP]{[SA]|[TG]}[AG]TPR{I|L};[{I|L}A][QA][WP]KA{I|L};[VS][KS][HQ]KA{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]KA{I|L};[VS]Q[PA]{I|L}NR{I|L};[{I|L}A][QA][WP]AK{I|L};[KP]{[SA]|[TG]}[WP]KA{I|L} 4.573;3.649;3.5184;2.5944;2.0573;2.0227;1.8921;1.8558;1.8431;1.7667 -;-;-;-;-;-;-;-;-;- 492 1 2.496 104641.6 1.0 1361 4000 5359 HBL1_DMSO_200M_050219_2,5363 HBL1_DMSO_200M_050219_2,5363,PFPLGTPRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5365 27.375 29.0 1816200.0 25 0 113340.0 + 28908 QAPPPPQQV 9 92 481.2586875982422 960.5028222632844 2 481.2588378787041 MULTI CID FTMS 0 0 0 5364 2053131.875 0.3477003630127817 55 -0.9028911590576172 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 74.92900055777586 0.0191935851694334 4 [QA]PPPPQQV 9 0 + 61.353 0.0 0.0 6.3876 6.3876 89.645 0.0 0.0 0.0 40.93031495462782 5.297821185155193 5.297821185155193 13.455612550363796 0 1.8979400086720373 1.6989700043360187 0.0 0.7302046884880937 + + [QA]PPPPQQV;[QA]PPPPQ[AG]V;[QA][YK]PQQV;[QA][{I|L}T]HT[YK] 6.3876;4.9867;2.7936;1.0499 +;-;-;- + 898 + 1 2.496 44002.2 1.0 1362 4001 5364 HBL1_DMSO_200M_050219_2,5365 HBL1_DMSO_200M_050219_2,5365,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5366 27.377 52.0 1149700.0 25 0 203020.0 42688 VTWEVLEGEV 10 63 387.53177347641486 1159.5734910294443 3 387.5316650271416 MULTI CID FTMS 0 0 0 5364 736070.25 0.478995903056187 8 -0.2486896514892578 2 Unmodified _VTWEVLEGEV_ ENSG00000138385|ENST00000260956|SSB;ENST00000438469.2_1_1:146553889-146554591:-|nuORF 18.1463463914782 0.5430639438673815 4 VTERE 5 6 59.438 0.0 0.0 5.1259 0.0 0.0 0.0 542.2501314752561 542.2501314752561 55.45880017344075 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.4247425010840047 VTERE 5.1259 - 123 + 1 2.496 58088.2 1.0 1363 4001 5364 HBL1_DMSO_200M_050219_2,5366 HBL1_DMSO_200M_050219_2,5366,VTWEVLEGEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5367 27.378 43.0 1251400.0 25 0 152330.0 + 34681 SPSIFEQSQ 9 78 341.4967843644227 1021.468523693468 3 341.4967224001884 MULTI CID FTMS 0 0 0 5364 1183081.75 0.2700182563549187 -4 0.0639152526855468 3 Unmodified _SPSIFEQSQ_ REV__ENST00000455236.4_1_22:38121103-38121262:+|nuORF 19.256988751693697 0.3154191944385105 4 [PS]S[HS]AASS 9 -1 45.811 0.0 0.0 4.4848 0.0 0.0 0.0 207.1131551498788 207.1131551498788 25.09758745913772 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.6747425010840047 0.0 [PS]S[HS]AASS 4.4848 - 144 1 2.496 54672.5 1.0 1364 4001 5364 HBL1_DMSO_200M_050219_2,5367 HBL1_DMSO_200M_050219_2,5367,SPSIFEQSQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5368 27.384 369.0 242560.0 25 0 26311.0 + 17703 KPTKKYFN 8 110 513.290499893586 1024.566446853972 2 513.2908203005791 MULTI CID FTMS 0 0 0 5364 198519.125 0.3792540328574766 12 -0.344430923461914 4 Unmodified _KPTKKYFN_ REV__ENSG00000278685|ENST00000615129|IQCA1L 15.847184025352805 0.6768015514314958 4 KPT 3 -1 39.253 0.0 0.0 3.8311 0.0 0.0 0.0 695.3479338831683 695.3479338831683 23.67931555708239 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 KPT 3.8311 + + 126 + 1 2.496 72743.4 1.0 1365 4001 5364 HBL1_DMSO_200M_050219_2,5368 HBL1_DMSO_200M_050219_2,5368,KPTKKYFN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5369 27.391 360.0 217850.0 25 0 22500.0 24586 MLIAECWMSEV 11 101 437.8632179120823 1310.5678243364468 3 437.8633911013603 MULTI CID FTMS 0 0 0 5364 141227.3125 0.7207202810814104 48 -0.8579349517822266 5 Unmodified _MLIAECWMSEV_ ENSG00000158125|ENST00000379416|XDH 4.715918219556657 0.8528979259967293 4 PM 2 10 21.917 0.0 0.0 1.6723 0.0 0.0 1064.4636898414217 0.0 1064.4636898414217 0.0 11.079743468626232 0.0 0.0 0 0.634400500525261 0.0 0.0 0.0 PM 1.6723 - 38 1 2.496 66447.7 1.0 1366 4001 5364 HBL1_DMSO_200M_050219_2,5369 HBL1_DMSO_200M_050219_2,5369,MLIAECWMSEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5370 27.396 283.0 180940.0 25 0 6894.4 + 40255 VGSYHLSDPL 10 103 544.2731687015691 1086.5317844699382 2 544.2733032107353 MULTI CID FTMS 0 0 0 5364 138511.96875 0.3493591130513369 -4 0.0639152526855468 6 Unmodified _VGSYHLSDPL_ REV__ENSG00000135424|ENST00000257879|ITGA7;REV__nc|ENSG00000135424|Q13683-10|ITGA7;REV__nc|ENSG00000135424|Q13683-13|ITGA7;REV__nc|ENSG00000135424|Q13683-3|ITGA7;REV__nc|ENSG00000135424|Q13683|ITGA7 13.90604991867851 0.6142120002215601 4 A[YC(Carbamidomethyl (C))]K{M(Oxidation (M))|F}SY 7 -1 29.8 0.0 0.0 2.7426 0.0 0.0 149.10691503408583 0.0 149.10691503408583 0.0 -0.528099010470914 -0.528099010470914 0.0 0 0.3807196863200844 0.0 0.6307196863200843 0.0 A[YC(Carbamidomethyl (C))]K{M(Oxidation (M))|F}SY 2.7426 - 224 + 1 2.496 44070.9 1.0 1367 4001 5364 HBL1_DMSO_200M_050219_2,5370 HBL1_DMSO_200M_050219_2,5370,VGSYHLSDPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5371 27.41 800.0 213740.0 25 0 22471.0 + 24147 LYQNTRSY 8 129 522.7588261453808 1043.5030993575615 2 522.7595703005791 MULTI CID FTMS 0 0 0 5364 124145.4921875 0.1334559551473884 -4 0.0639152526855468 7 Unmodified _LYQNTRSY_ ENSG00000126804|ENST00000683701|ZBTB1;nc|ENSG00000126804|Q9Y2K1-2|ZBTB1 78.7280429016045 0.0974402130616148 4 {I|L}YQNTRSY 8 0 + 99.353 0.0 0.0 9.5211 9.5211 94.497 0.0 0.0 0.0 71.14684009554843 14.024174299985006 14.024174299985006 9.262137858390815 0 1.0994850021680094 2.0 0.7742275032520141 1.2302046884880935 + + {I|L}YQNTRSY;{I|L}Y[AG]NTRSY;{I|L}YQGGTRSY;{I|L}Y[AG]GGTRSY;{I|L}YQNT[HT]AP;{I|L}Y[AG]NT[HT]AP;{I|L}YQGGT[HT]AP;{I|L}YYR{[{M(Oxidation (M))|F}D]|MM}AP;{I|L}YYR[EP]{[CT]|[{M(Oxidation (M))|F}G]};{I|L}Y[MN]R[HN]P 9.5211;8.6335;8.6335;7.751;7.2136;6.3312;5.9242;5.0819;4.8866;3.6561 +;-;-;-;-;-;-;-;-;- + 596 + 1 2.496 132252.2 0.5600000023841858 1368 4001 5364 HBL1_DMSO_200M_050219_2,5371 HBL1_DMSO_200M_050219_2,5371,LYQNTRSY True True LYQNTRSY 27.409978 522.759570300579 12042357.0 5364.0 ENSG00000126804|ENST00000683701|ZBTB1;;nc|ENSG00000126804|Q9Y2K1-2|ZBTB1 5.69209098815918 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5372 27.424 800.0 76226.0 25 0 19001.0 -1 0 34 1085.4248750538936 3253.2527957618813 3 1085.756884753704 MULTI CID FTMS 0 0 0 5364 122035.703125 0.4816057370284444 -3 0.0599346160888671 8 4 YG 2 -1 9.464 0.0 0.0 0.29091 0.0 0.0 1781.6253066034808 1248.538241874811 3030.163548478292 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.29091 - 10 + 1 2.496 59522.2 0.4099999964237213 1369 4001 5364 HBL1_DMSO_200M_050219_2,5372 HBL1_DMSO_200M_050219_2,5372, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5373 27.438 800.0 139950.0 25 0 14549.0 + 13727 HQVDPTEPVG 10 115 539.7616674085966 1077.5087818839932 2 539.7618286013603 MULTI CID FTMS 0 0 0 5364 116179.8671875 0.2094725536866436 -7 0.1229667663574218 9 Unmodified _HQVDPTEPVG_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 36.506200033944 0.1944608063770638 4 VDPTEPR 7 4 40.556 0.0 0.0 3.7638 0.0 0.0 265.1178456037125 0.0 265.1178456037125 0.0 19.01075919973336 0.0 0.0 0 0.7742275032520141 0.0 1.2134679910804405 0.0 VDPTEPR 3.7638 - 813 1 2.496 98785.5 0.5400000214576721 1370 4001 5364 HBL1_DMSO_200M_050219_2,5373 HBL1_DMSO_200M_050219_2,5373,HQVDPTEPVG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5375 27.442 9.4 6225300.0 25 0 777990.0 + 31 AAAPPAKEI 9 67 434.2503355951893 866.4861182571786 2 434.2504455447197 MULTI CID FTMS 0 0 0 5374 6580800.5 0.8693406516395151 -1 0.0669574737548828 1 Unmodified _AAAPPAKEI_ ENSG00000166851|ENST00000300093|PLK1 32.30548876998284 0.1201446275138228 4 AAAPPP 6 4 40.979 0.0 0.0 4.7294 0.0 0.0 0.0 359.1923920211037 359.1923920211037 9.552593986562812 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 AAAPPP 4.7294 - 120 1 2.496 50207.4 1.0 1371 4002 5374 HBL1_DMSO_200M_050219_2,5375 HBL1_DMSO_200M_050219_2,5375,AAAPPAKEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5376 27.456 800.0 50563.0 25 0 13541.0 -1 0 34 1113.136001052174 3336.386173756722 3 1113.471606433392 MULTI CID FTMS 0 0 0 5374 91216.9140625 0.2998961335736934 6 -0.1613960266113281 2 4 E 1 -1 6.9897 0.0 0.0 0.2095 0.0 0.0 2680.157854520197 524.1628512018186 3204.320705722016 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.2095 - 2 + 1 2.496 42003.5 0.5799999833106995 1372 4002 5374 HBL1_DMSO_200M_050219_2,5376 HBL1_DMSO_200M_050219_2,5376, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5377 27.46 182.0 356550.0 25 0 78838.0 + 2924 AVGPVHNSV 9 90 440.2377040314023 878.4608551296046 2 440.2378112673759 MULTI CID FTMS 0 0 0 5374 306244.0625 0.1863116886158765 -8 0.1899242401123047 3 Unmodified _AVGPVHNSV_ ENSG00000115760|ENST00000421745|BIRC6 42.09456458481378 0.0639583784996157 4 {[VA]|[{I|L}G]}G[YN]S[R{I|L}] 8 5 + 38.121 0.0 0.0 4.3396 4.3396 83.298 0.0 0.0 0.0 20.898255349109505 25.049406363485858 20.898255349109505 28.399480616943507 0 0.5 2.0 0.0 0.4247425010840047 {[VA]|[{I|L}G]}G[YN]S[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}[YN]S[R{I|L}];[YQ]{[NV]|[RG]}S[R{I|L}] 4.3396;1.1067;0.85415 -;-;- 140 1 2.496 55620.9 1.0 1373 4002 5374 HBL1_DMSO_200M_050219_2,5377 HBL1_DMSO_200M_050219_2,5377,AVGPVHNSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5378 27.464 214.0 372560.0 25 0 32594.0 + 30412 RAYQKQPTI 9 87 552.8116016465897 1103.6086503599793 2 552.8118774294853 MULTI CID FTMS 0 0 0 5374 290143.8125 0.4148024477297471 -4 0.12689208984375 4 Unmodified _RAYQKQPTI_ ENSG00000142534|ENST00000270625|RPS11;ENST00000599167.5_1_19:49999677-50000690:+|nuORF;ENST00000600027.5_1_19:49999677-50000944:+|nuORF 27.628801355627647 0.1796483985696185 4 QKQPT{I|L} 6 3 53.404 0.0 0.0 4.839 0.0 0.0 390.2022572248063 0.0 390.2022572248063 0.0 18.294262996144248 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + QKQPT{I|L} 4.839 + + 117 1 2.496 66048.4 1.0 1374 4002 5374 HBL1_DMSO_200M_050219_2,5378 HBL1_DMSO_200M_050219_2,5378,RAYQKQPTI False True RAYQKQPTI 27.463659 552.811877429485 10465717.0 5374.0 ENST00000599167.5_1_19:49999677-50000690:+|nuORF;;ENST00000600027.5_1_19:49999677-50000944:+|nuORF;;ENSG00000142534|ENST00000270625|RPS11 5.388421694437663 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5379 27.471 402.0 373860.0 25 0 21576.0 + 38849 TVIHHVHSL 9 148 348.19924321341057 1041.5759002404318 3 348.1978637576103 MULTI CID FTMS 0 0 0 5374 221517.046875 1.0 0 0.0 5 Unmodified _TVIHHVHSL_ ENSG00000158201|ENST00000289119|ABHD3;ENST00000578270.5_1_18:19244077-19283696:-|nuORF 39.957323273325 0.0756908302845263 4 {[TV]|[{I|L}S]}{I|L}HH[HV]S{I|L} 9 0 + 51.145 0.0 0.0 4.9104 4.9104 82.926 0.0 0.0 0.0 28.66169222042796 14.445670420020896 14.445670420020896 11.765224064671145 0 0.2887254899964357 1.6989700043360187 1.4947026752325154 0.0 + + {[TV]|[{I|L}S]}{I|L}HH[HV]S{I|L};{[TV]|[{I|L}S]}{I|L}[PA]DN{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}[PA]{[NV]|[RG]}ES{I|L};{[TV]|[{I|L}S]}{I|L}[PA]D[WK]{I|L};{[TV]|[{I|L}S]}{I|L}[PA]D[K{I|L}]W;{[TV]|[{I|L}S]}{I|L}[PA]DNVT{I|L};{[TV]|[{I|L}S]}{I|L}[PA][WR]S{I|L};{[TV]|[{I|L}S]}{I|L}[PA]Q[DV]S{I|L};{[TV]|[{I|L}S]}{I|L}[PA]{[NV]|[RG]}DT{I|L};{[TV]|[{I|L}S]}{I|L}[PA]D{I|L}{I|L}[NS] 4.9104;3.7808;3.185;3.1697;3.0767;2.9256;2.7759;2.4869;2.3297;2.0329 +;-;-;-;-;-;-;-;-;- + 354 + 1 2.496 121879.1 1.0 1375 4002 5374 HBL1_DMSO_200M_050219_2,5379 HBL1_DMSO_200M_050219_2,5379,TVIHHVHSL True True TVIHHVHSL 27.47084 348.19786375761 1125578.875 5374.0 ENST00000578270.5_1_18:19244077-19283696:-|nuORF;;ENSG00000158201|ENST00000289119|ABHD3 4.97687292098999 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5380 27.485 800.0 59149.0 25 0 1901.3 -1 0 80 977.4159682930376 2929.2260754793124 3 977.7521850466728 MULTI CID FTMS 0 0 0 5374 165730.9375 0.8975457407072218 -3 0.1205825805664062 6 4 [KQ]EY 4 -1 16.911 0.0 0.0 0.57733 0.0 0.0 0.0 2377.9419927979247 2377.9419927979247 4.744237387763093 0.0 0.0 0.0 0 0.5 0.0 0.0 0.5 [KQ]EY 0.57733 - 105 1 2.496 35200.5 0.5199999809265137 1376 4002 5374 HBL1_DMSO_200M_050219_2,5380 HBL1_DMSO_200M_050219_2,5380, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5381 27.499 800.0 121250.0 25 0 21838.0 + -1 ENFCLLTKM 9 104 557.765123717972 1113.5156945027438 2 557.7654296755791 MULTI CID FTMS 0 0 0 5374 116191.546875 0.6803688136605541 4 -0.1189193725585937 7 Oxidation (M) _ENFCLLTKM(Oxidation (M))_ REV__ENST00000486494.1_1_2:71607360-71607817:+|nuORF 3.944395688203298 0.7769873103969335 4 [KA]PE[{I|L}T]T{M(Oxidation (M))|F}K 9 -1 33.746 0.0 0.0 3.0306 0.0 0.0 0.0 94.9448513881729 94.9448513881729 7.599680878850926 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 [KA]PE[{I|L}T]T{M(Oxidation (M))|F}K 3.0306 - 183 1 2.496 76639.6 0.550000011920929 1377 4002 5374 HBL1_DMSO_200M_050219_2,5381 HBL1_DMSO_200M_050219_2,5381,ENFCLLTKM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5383 27.503 26.0 2024700.0 25 0 232240.0 + 17568 KPQRELVQ 8 72 499.2934568128513 996.5723606925028 2 499.2932617068291 MULTI CID FTMS 0 0 0 5382 1932574.875 0.7980657514628402 -3 0.1677665710449218 1 Unmodified _KPQRELVQ_ REV__ENSG00000152942|ENST00000354868|RAD17;REV__nc|ENSG00000152942|O75943-4|RAD17;REV__nc|ENSG00000152942|O75943|RAD17 21.74664581756881 0.5868176546531598 4 KPT 3 -1 39.253 0.0 0.0 3.9388 0.0 0.0 0.0 667.3541727697166 667.3541727697166 28.14326570884305 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 KPT 3.9388 - 29 + 1 2.485 49706.6 1.0 1378 4003 5382 HBL1_DMSO_200M_050219_2,5383 HBL1_DMSO_200M_050219_2,5383,KPQRELVQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5384 27.508 261.0 311700.0 25 0 25155.0 + 5801 DPPQPNHSI 9 105 502.74350445355566 1003.4724559739112 2 502.7442504763603 MULTI CID FTMS 0 0 0 5382 135833.4375 0.353004837678538 -11 0.2710514068603515 2 Unmodified _DPPQPNHSI_ ENSG00000106948|ENST00000374088|AKNA;ENST00000223791.7_2_9:117130488-117139135:-|nuORF;nc|ENSG00000106948|Q7Z591-2|AKNA;nc|ENSG00000106948|Q7Z591-3|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA 47.74868867922204 0.0453060283459952 4 [DP]PQ[NP]H{[TV]|[{I|L}S]} 9 0 + 37.354 0.0 0.0 3.7224 3.7224 68.779 0.0 0.0 0.0 17.25727267161631 1.3414380832723865 1.3414380832723865 3.0102999566398125 0 0.9177353201839438 2.0 0.3494850021680094 0.75 + + [DP]PQ[NP]H{[TV]|[{I|L}S]};[DP]PQH[NP]{[TV]|[{I|L}S]};[PS][HN]{I|L}EP[NP];[YQ]{[QC]|[C(Carbamidomethyl (C))A]}[R{I|L}]{[HG]|PP} 3.7224;3.4224;1.4765;0.91663 +;-;-;- + 193 + 1 2.485 66379.9 1.0 1379 4003 5382 HBL1_DMSO_200M_050219_2,5384 HBL1_DMSO_200M_050219_2,5384,DPPQPNHSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5387 27.528 800.0 115350.0 25 0 10457.0 + 43891 YFSDRKNNY 9 93 603.7805868825475 1205.5466208318949 2 603.7809936404228 MULTI CID FTMS 0 0 0 5386 87039.75 0.6432358462384596 -1 0.0038814544677734 1 Unmodified _YFSDRKNNY_ ENSG00000084093|ENST00000309042|REST;nc|ENSG00000084093|Q13127-2|REST;nc|ENSG00000084093|Q13127-3|REST;nc|ENSG00000084093|Q13127-4|REST 40.23920728925047 0.0741434193262949 4 Y{M(Oxidation (M))|F}[Y{M(Oxidation (M))|F}]PEVNQ 9 6 + 40.49 0.0 0.0 3.3587 3.3587 71.568 0.0 0.0 0.0 11.65423722065669 4.304549730827468 4.304549730827468 5.713337517843655 0 0.4247425010840047 0.0 0.0 0.8494850021680094 Y{M(Oxidation (M))|F}[Y{M(Oxidation (M))|F}]PEVNQ;Y{M(Oxidation (M))|F}[Y{M(Oxidation (M))|F}]{[QD]|[EN]|[WG]|[KD]|[RS]}VPQ;Y{M(Oxidation (M))|F}[Y{M(Oxidation (M))|F}]PEVGGQ;Y[{M(Oxidation (M))|F}V]{[HG]|PP}VPYPQ;Y{M(Oxidation (M))|F}[Y{M(Oxidation (M))|F}]P[H{I|L}]GY;Y[{M(Oxidation (M))|F}V][NP]PEVNQ;Y{M(Oxidation (M))|F}[Y{M(Oxidation (M))|F}][YT][R{M(Oxidation (M))|F}];Y[PG][R{M(Oxidation (M))|F}]PEVNQ 3.3587;2.8847;2.5948;2.4977;1.6829;1.6405;1.3418;1.3104 -;-;-;-;-;-;-;- 995 + 1 2.485 71563.0 0.6600000262260437 1380 4005 5386 HBL1_DMSO_200M_050219_2,5387 HBL1_DMSO_200M_050219_2,5387,YFSDRKNNY True True YFSDRKNNY 27.527829 603.780993640423 678439.375 5386.0 nc|ENSG00000084093|Q13127-4|REST;;nc|ENSG00000084093|Q13127-2|REST;;nc|ENSG00000084093|Q13127-3|REST;;ENSG00000084093|ENST00000309042|REST 7.6543552080790205 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5388 27.529 21.0 2220500.0 25 0 171440.0 + 34803 SQEGRPVQV 9 82 500.2647376352127 998.5149223372256 2 500.2646667361259 MULTI CID FTMS 0 0 0 5386 1970729.75 0.1793278070470296 -9 0.2348556518554687 2 Unmodified _SQEGRPVQV_ ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 49.55428908609986 0.0413471690215031 4 {[QS]|[NT]}E{[NV]|[RG]}[VP]QV 9 0 + 40.484 0.0 0.0 4.0544 4.0544 79.185 0.0 0.0 0.0 5.198974283731289 5.198974283731289 5.198974283731289 10.2334196030246 0 1.805462187404089 1.154901959985743 0.0 1.0 + + {[QS]|[NT]}E{[NV]|[RG]}[VP]QV;{[QS]|[NT]}{I|L}{I|L}{[NV]|[RG]}YY;{[QS]|[NT]}EP[KP][WK];{[QV]|[N{I|L}]|[RA]|[KV]}P{[NV]|[RG]}ESQV;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]{[NV]|[RG]}YY 4.0544;3.0296;2.7939;1.2505;0.54438 +;-;-;-;- + 149 + 1 2.485 44627.8 1.0 1381 4005 5386 HBL1_DMSO_200M_050219_2,5388 HBL1_DMSO_200M_050219_2,5388,SQEGRPVQV True True SQEGRPVQV 27.529008 500.264666736126 325609440.0 5386.0 ENSG00000168090|ENST00000303904|COPS6;;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 7.0901557604471845 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5389 27.543 800.0 175240.0 25 0 25039.0 + 2919 AVGGREKTQ 9 166 473.2590293163751 0 473.2581970095634 PEAK CID FTMS 0 0 0 5386 93694.2265625 0.6675820025421069 -1 0.0038814544677734 3 Unmodified _AVGGREKTQ_ REV__ENSG00000142185|ENST00000397928|TRPM2;REV__nc|ENSG00000142185|O94759-2|TRPM2;REV__nc|ENSG00000142185|O94759-3|TRPM2 11.640296217721598 0.2934555500198502 4 P 1 -1 5.8412 0.0 0.0 0.61844 0.0 0.0 375.2118930059939 469.2100924127563 844.4219854187502 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P 0.61844 - 16 + 1 2.485 108879.1 0.6499999761581421 1382 4005 5386 HBL1_DMSO_200M_050219_2,5389 HBL1_DMSO_200M_050219_2,5389,AVGGREKTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5390 27.557 800.0 66613.0 25 0 22348.0 -1 FFHKKERRMRF 11 41 799.4314454101042 0 799.4318115115166 PEAK CID FTMS 0 0 0 5386 79972.9453125 0.9939942051119268 3 -0.087371826171875 4 Oxidation (M) _FFHKKERRM(Oxidation (M))RF_ ENSG00000141837|ENST00000360228|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A 0.3070304955306653 0.4761840153648598 4 DA 2 -1 14.464 0.0 0.0 0.90578 0.0 0.0 798.4258046385457 609.3370584452848 1407.7628630838306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 DA 0.90578 - 110 + 1 2.485 47772.2 0.5400000214576721 1383 4005 5386 HBL1_DMSO_200M_050219_2,5390 HBL1_DMSO_200M_050219_2,5390,FFHKKERRMRF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5392 27.565 285.0 180110.0 25 0 28489.0 + 36355 SYPHHATQL 9 97 527.2591937562819 1052.5038345793637 2 527.2595703005791 MULTI CID FTMS 0 0 0 5391 145632.703125 0.0200727671683547 18 -0.3718185424804687 1 Unmodified _SYPHHATQL_ ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 19.256988751693697 0.3154191944385105 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 9 4 + 30.657 0.0 0.0 2.9128 2.9128 68.378 0.0 0.0 0.0 3.979400086720375 4.762036441594194 3.979400086720375 3.979400086720375 0 0.2614393726401688 0.0 0.7742275032520141 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[QN]|[E{I|L}]|[KN]}EATQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{NN|[MP]|[D{I|L}]|[EV]}[DV]TQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HAT[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HM]{I|L}Q[RH][MT];{[QN]|[E{I|L}]|[KN]}EAT[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{NN|[MP]|[D{I|L}]|[EV]}[DV]T[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[VG][SG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[{M(Oxidation (M))|F}C]|[YS]}[RH][AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[QN]|[E{I|L}]|[KN]}E[VG][SG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 2.9128;2.5347;2.2436;2.0379;1.9676;1.6598;1.3687;1.2817;1.0876;0.90365 -;-;-;-;-;-;-;-;-;- 248 1 2.472 43436.0 1.0 1384 4006 5391 HBL1_DMSO_200M_050219_2,5392 HBL1_DMSO_200M_050219_2,5392,SYPHHATQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5393 27.579 800.0 128970.0 25 0 6933.8 + 30286 QYPNGTHAY 9 131 525.7353337367373 1049.4561145402745 2 525.7361938357353 MULTI CID FTMS 0 0 0 5391 169308.375 1.0 0 0.0 2 Unmodified _QYPNGTHAY_ ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C 39.957323273325 0.0756908302845263 4 [YQ]PHNGTAY 9 2 + 51.128 0.0 0.0 4.8719 4.8719 82.642 0.0 0.0 0.0 33.848200093054714 9.217131163859314 9.217131163859314 11.426675035687316 0 0.5796896906561032 2.0 0.3252574989159953 0.6549471895720985 [YQ]PHNGTAY;{[WS]|[C(Carbamidomethyl (C)){I|L}]}HNHP{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ][W{M(Oxidation (M))|F}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y;[YQ]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y;[YQ]QQNP{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]PNQQC(Carbamidomethyl (C)){I|L};[YQ][W{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}Y;[YQ]Y[WY]D{I|L};[YQ]QQGGP{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]PNQQ[CG]{I|L} 4.8719;3.7831;3.3912;3.2605;2.9208;2.8546;2.406;2.318;2.0382;1.9721 -;-;-;-;-;-;-;-;-;- 854 + 1 2.472 86537.5 0.6499999761581421 1385 4006 5391 HBL1_DMSO_200M_050219_2,5393 HBL1_DMSO_200M_050219_2,5393,QYPNGTHAY True True QYPNGTHAY 27.579302 525.736193835735 6709110.75 5391.0 nc|ENSG00000171988|Q15652-3|JMJD1C;;nc|ENSG00000171988|Q15652-2|JMJD1C;;ENSG00000171988|ENST00000399262|JMJD1C 5.411481698354085 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5394 27.593 800.0 195970.0 25 0 28800.0 + 30852 RILQETVK 8 124 493.8034508912368 985.5923488492735 2 493.8036987185478 MULTI CID FTMS 0 0 0 5391 136463.1875 0.1684017081650275 -10 0.2797508239746094 3 Unmodified _RILQETVK_ ENSG00000156510|ENST00000354624|HKDC1 36.12702656103203 0.299085846329477 4 VT[HK]TVK 7 5 49.173 0.0 0.0 4.9892 0.0 0.0 174.0996300570635 0.0 174.0996300570635 0.0 38.213862293172326 0.0 0.0 0 1.424742501084005 0.0 0.6382104921644451 0.3807196863200844 VT[HK]TVK 4.9892 - 334 + 1 2.472 123736.1 0.5899999737739563 1386 4006 5391 HBL1_DMSO_200M_050219_2,5394 HBL1_DMSO_200M_050219_2,5394,RILQETVK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5396 27.598 23.0 1881300.0 25 0 211200.0 -1 IPMPPHWE 8 63 511.74108913238666 1021.4676253315732 2 511.7417480349541 MULTI CID FTMS 0 0 0 5395 2516222.75 0.8619921492347671 1 -0.0059776306152343 1 Oxidation (M) _IPM(Oxidation (M))PPHWE_ ENSG00000111224|ENST00000228820|PARP11;nc|ENSG00000111224|Q9NR21-1|PARP11;nc|ENSG00000111224|Q9NR21-2|PARP11;nc|ENSG00000111224|Q9NR21-5|PARP11 14.581692164780916 0.6954967302934248 4 {I|L}PSSA 5 -1 61.766 0.0 0.0 6.0468 0.0 0.0 0.0 563.2080172174436 563.2080172174436 51.387393466951 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PSSA 6.0468 - 26 + 1 2.472 43648.4 1.0 1387 4007 5395 HBL1_DMSO_200M_050219_2,5396 HBL1_DMSO_200M_050219_2,5396,IPMPPHWE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5397 27.599 58.0 1204100.0 25 0 78729.0 + 17856 KQLEDGRTL 9 95 530.2933152612068 1058.5720775892134 2 530.2935058474541 MULTI CID FTMS 0 0 0 5395 833523.0625 0.2984598991190484 5 -0.0861701965332031 2 Unmodified _KQLEDGRTL_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000399822.2_1_9:22012279-22012411:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF 31.26834338654808 0.1333407332142048 4 KQ{I|L}ED{I|L}KW 8 4 + 59.423 0.0 0.0 5.6135 5.6135 84.888 0.0 0.0 0.0 22.875693080586927 7.880325230808154 7.880325230808154 9.262137858390815 0 0.6989700043360187 0.0 0.7302046884880937 0.3807196863200844 KQ{I|L}ED{I|L}KW;K[AG]{I|L}ED{I|L}KW 5.6135;4.7385 -;- 388 + 1 2.472 58785.7 1.0 1388 4007 5395 HBL1_DMSO_200M_050219_2,5397 HBL1_DMSO_200M_050219_2,5397,KQLEDGRTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5399 27.604 20.0 3917600.0 25 0 574400.0 38254 TPVPLRAR 8 65 303.8594131764284 908.5564101294852 3 303.8590576052666 MULTI CID FTMS 0 0 0 5398 2675570.0 0.8251514254345386 3 -0.0601272583007812 1 Unmodified _TPVPLRAR_ ENST00000534035.1_1_11:44102597-44105415:+|nuORF 18.13498045792455 0.6430038125133779 4 TPVK 4 5 59.24 0.0 0.0 6.5203 0.0 0.0 0.0 480.2710360162719 480.2710360162719 49.63615337528019 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.3807196863200844 TPVK 6.5203 - 24 + 1 2.472 68975.8 1.0 1389 4008 5398 HBL1_DMSO_200M_050219_2,5399 HBL1_DMSO_200M_050219_2,5399,TPVPLRAR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5400 27.606 91.0 1020300.0 25 0 166470.0 38255 TPVPLRAR 8 73 455.2848854100624 908.5552178869248 2 455.2849609255791 MULTI CID FTMS 0 0 0 5398 862897.875 0.8379367347224895 2 -0.05206298828125 2 Unmodified _TPVPLRAR_ ENST00000534035.1_1_11:44102597-44105415:+|nuORF 24.67388899826682 0.525179942228231 4 TPVKQ[KT]G 8 5 49.524 0.0 0.0 5.4508 0.0 0.0 0.0 66.03573785953358 66.03573785953358 30.059575255655417 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5 0.8494850021680094 TPVKQ[KT]G 5.4508 - 154 + 1 2.472 76269.0 1.0 1390 4008 5398 HBL1_DMSO_200M_050219_2,5400 HBL1_DMSO_200M_050219_2,5400,TPVPLRAR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5401 27.619 800.0 166690.0 25 0 39778.0 + 43822 YFEDRRPSA 9 96 570.7750351431292 1139.5355173530584 2 570.7752563357353 MULTI CID FTMS 0 0 0 5398 151035.046875 0.1871146881608664 -12 0.3222274780273437 3 Unmodified _YFEDRRPSA_ ENSG00000135821|ENST00000331872|GLUL 34.40172386719151 0.1061884637610825 4 [Y{M(Oxidation (M))|F}]EDRR[PG]T 9 2 [Y{M(Oxidation (M))|F}]E + + 25.781 2.2403 0.51012 2.2624 2.2624 44.813 0.0 0.0 0.0 0.0 -0.2448207480968989 -0.2448207480968989 0.0 0 0.9247425010840048 0.0 0.1861818737241735 0.6747425010840047 [Y{M(Oxidation (M))|F}]EDRR[PG]T 2.2624 - 230 + 1 2.472 106871.8 0.6200000047683716 1391 4008 5398 HBL1_DMSO_200M_050219_2,5401 HBL1_DMSO_200M_050219_2,5401,YFEDRRPSA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5403 27.624 65.0 826580.0 25 0 113970.0 + 17679 KPTGARPSAL 10 79 333.19832133429645 996.5731346030892 3 333.1980468630791 MULTI CID FTMS 0 0 0 5402 923435.3125 1.0 0 0.0 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 16.149105407346934 0.5765757077271437 4 [KP]{[SA]|[TG]}[QT]PR{I|L} 9 4 + 28.151 0.0 0.0 2.8248 2.8248 72.766 0.0 0.0 0.0 2.917112166456452 24.17158397862423 2.917112166456452 8.221740651475638 0 0.3807196863200844 0.0 0.4247425010840047 0.3494850021680094 [KP]{[SA]|[TG]}[QT]PR{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]KA{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QV]|[N{I|L}]|[RA]|[KV]}R{I|L};[KP]{[SA]|[TG]}[WP]KA{I|L};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]AK{I|L};[KP]{[SA]|[TG]}[WP]AK{I|L} 2.8248;1.9998;1.9252;1.8231;1.6177;1.4411 -;-;-;-;-;- 85 1 2.472 53921.0 1.0 1392 4009 5402 HBL1_DMSO_200M_050219_2,5403 HBL1_DMSO_200M_050219_2,5403,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5404 27.632 466.0 139720.0 25 0 9206.6 + 13990 HYYEGGNSQY 10 89 609.2466736374922 1216.4787943417844 2 609.2463867068291 MULTI CID FTMS 0 0 0 5402 188611.046875 0.2380702254986867 -10 0.3023147583007812 2 Unmodified _HYYEGGNSQY_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-3|SS18L1;nc|ENSG00000184402|O75177-4|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 99.79894945604345 0.0086314121850342 4 {[WN]|[YH]}YEGGNSQY 10 0 + 96.124 0.0 0.0 7.9018 7.9018 90.996 0.0 0.0 0.0 12.371567289424137 16.53212513775344 12.371567289424137 9.164539485499262 0 0.2887254899964357 1.3010299956639813 2.0356668758921828 0.3494850021680094 + + {[WN]|[YH]}YEGGNSQY;{[WN]|[YH]}YEGGNS[AG]Y;{[WN]|[YH]}YEGGGGSQY;{[WN]|[YH]}YENNSQY;[NS]P{M(Oxidation (M))|F}{M(Oxidation (M))|F}GGNSQY;{[WN]|[YH]}YEGGGGS[AG]Y;{[WN]|[YH]}YENGGSQY;{[WN]|[YH]}YENNS[AG]Y;{[QS]|[NT]}[{M(Oxidation (M))|F}T]WGNSQY;[NS]P{M(Oxidation (M))|F}{M(Oxidation (M))|F}GGGGSQY 7.9018;7.1485;7.1485;7.0519;6.8848;6.3981;6.295;6.295;6.1868;6.1344 +;-;-;-;-;-;-;-;-;- + 1521 1 2.472 53509.4 1.0 1393 4009 5402 HBL1_DMSO_200M_050219_2,5404 HBL1_DMSO_200M_050219_2,5404,HYYEGGNSQY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5405 27.634 74.0 845460.0 25 0 44640.0 + 5096 DHNDGLGNAF 10 83 530.2283339193335 1058.442114905467 2 530.2285644412041 MULTI CID FTMS 0 0 0 5402 755670.9375 0.7189574644476632 6 -0.1491928100585937 3 Unmodified _DHNDGLGNAF_ ENSG00000271447|ENST00000605424|MMP28 16.149105407346934 0.5765757077271437 4 [HD]EAQQNA{M(Oxidation (M))|F} 9 5 + 57.01 0.0 0.0 5.3862 5.3862 83.119 0.0 0.0 0.0 7.147642715192504 28.025757394115928 7.147642715192504 9.208187539523747 0 0.7742275032520141 0.0 0.2887254899964357 0.3807196863200844 [HD]EAQQNA{M(Oxidation (M))|F};[HD]EA[AG]QNA{M(Oxidation (M))|F};[HD]EAQ[AG]NA{M(Oxidation (M))|F};[HD]EAQQGGA{M(Oxidation (M))|F};[HD]EA[AG][AG]NA{M(Oxidation (M))|F};[HD]EA[AG]QGGA{M(Oxidation (M))|F};[HD]EAQ[AG]GGA{M(Oxidation (M))|F};{[WT]|[RM]}{M(Oxidation (M))|F}HHNA{M(Oxidation (M))|F};{[WT]|[RM]}{M(Oxidation (M))|F}HHGGA{M(Oxidation (M))|F} 5.3862;4.5162;4.5162;4.5162;3.6504;3.6504;3.6504;1.8831;1.008 -;-;-;-;-;-;-;-;- 200 1 2.472 51770.5 1.0 1394 4009 5402 HBL1_DMSO_200M_050219_2,5405 HBL1_DMSO_200M_050219_2,5405,DHNDGLGNAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5406 27.637 173.0 525590.0 25 0 66280.0 + 44873 YPPHVQKV 8 110 323.1838573595554 966.5297426788665 3 323.1834899783134 MULTI CID FTMS 0 0 0 5402 277971.40625 0.7252290972341519 73 -1.004560470581055 4 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 28.486842064014134 0.4448922141344407 4 YPPHVQKV 8 0 + 52.049 0.0 0.0 5.3852 5.3852 71.72 0.0 0.0 0.0 26.867355479190067 3.802112417116064 3.802112417116064 1.249387366082999 0 0.0 1.0457574905606752 0.0 0.4247425010840047 + + YPPHVQKV;YPPVHQKV;YPPHVQVK;YPPVHQVK;YPPHV[AG]KV;YPPVH[AG]KV;YPPHV{[VA]|[{I|L}G]}GK;YPVPHQKV;YPPVH{[VA]|[{I|L}G]}GK;YPPHV[AG]VK 5.3852;5.2559;4.9918;4.8625;4.4269;4.2976;4.2157;4.0933;4.0864;4.0335 +;-;-;-;-;-;-;-;-;- + 304 + 1 2.472 77186.1 1.0 1395 4009 5402 HBL1_DMSO_200M_050219_2,5406 HBL1_DMSO_200M_050219_2,5406,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5407 27.651 800.0 60138.0 25 0 14203.0 -1 0 28 1110.4396507443694 3328.297122833308 3 1111.115405261517 MULTI CID FTMS 0 0 0 5402 88037.9609375 0.364911617034957 -7 0.181732177734375 5 4 E 1 -1 5.4846 0.0 0.0 0.16479 0.0 0.0 2672.0676794214123 524.1610811822874 3196.2287606037 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16479 - 1 + 1 2.472 47690.3 0.3499999940395355 1396 4009 5402 HBL1_DMSO_200M_050219_2,5407 HBL1_DMSO_200M_050219_2,5407, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5409 27.656 22.0 1820100.0 25 0 234160.0 15490 IPSSMSNMR 9 69 341.4967843644227 1021.468523693468 3 341.4967224001884 MULTI CID FTMS 0 0 0 5408 2185122.5 0.498716988383855 5 -0.1174659729003906 1 Unmodified _IPSSMSNMR_ ENSG00000119397|ENST00000373855|CNTRL;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 21.53697664764585 0.2571576504437394 4 {I|L}PSSAA 6 5 61.375 0.0 0.0 6.0085 0.0 0.0 0.0 492.1719149225219 492.1719149225219 50.89062518744797 0.0 0.0 0.0 0 0.6505149978319906 1.2218487496163564 0.0 0.0 {I|L}PSSAA 6.0085 - 77 + 1 2.463 43348.6 1.0 1397 4010 5408 HBL1_DMSO_200M_050219_2,5409 HBL1_DMSO_200M_050219_2,5409,IPSSMSNMR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5410 27.657 53.0 897650.0 25 0 66032.0 + 28909 QAPPPPQQV 9 88 481.2586875982422 960.5028222632844 2 481.2588989138603 MULTI CID FTMS 0 0 0 5408 1076205.875 0.1822567648821819 64 -0.8462772369384766 2 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 81.61307344734483 0.0171259190214613 4 [QA]PPP[PG]A{[QV]|[N{I|L}]|[RA]|[KV]} 10 2 + 52.468 0.0 0.0 5.4626 5.4626 80.299 0.0 0.0 0.0 6.956595481303978 7.269987279362624 6.956595481303978 6.53212513775344 0 1.0669015600442575 1.6989700043360187 0.0 0.8945990182825423 [QA]PPP[PG]A{[QV]|[N{I|L}]|[RA]|[KV]};[QA]PPP[QP]{[QV]|[N{I|L}]|[RA]|[KV]};[AG]PPAP[PG]A{[QV]|[N{I|L}]|[RA]|[KV]};[QP]PAP[PG]A{[QV]|[N{I|L}]|[RA]|[KV]};[QA]PPG{[HG]|PP}A{[QV]|[N{I|L}]|[RA]|[KV]};[PG]APAP[PG]A{[QV]|[N{I|L}]|[RA]|[KV]};[AG]PPPPQA{[QV]|[N{I|L}]|[RA]|[KV]};[QP]APP[PG]A{[QV]|[N{I|L}]|[RA]|[KV]};[PG]APPPQA{[QV]|[N{I|L}]|[RA]|[KV]};[QP]PPPQA{[QV]|[N{I|L}]|[RA]|[KV]} 5.4626;4.7825;4.7383;4.7158;4.6478;4.5961;4.5405;4.4854;4.3983;4.237 -;+;-;-;-;-;-;-;-;- + 772 1 2.463 42261.2 1.0 1398 4010 5408 HBL1_DMSO_200M_050219_2,5410 HBL1_DMSO_200M_050219_2,5410,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5411 27.659 103.0 509240.0 25 0 58066.0 + 24148 LYQNTRSY 8 62 522.7588261453808 1043.5030993575615 2 522.7593871951103 MULTI CID FTMS 0 0 0 5408 542988.5 0.5837106738608112 5 -0.1174659729003906 3 Unmodified _LYQNTRSY_ ENSG00000126804|ENST00000683701|ZBTB1;nc|ENSG00000126804|Q9Y2K1-2|ZBTB1 41.8396318013385 0.2035142800366642 4 {I|L}YQNTRSY 8 0 + 90.443 0.0 0.0 8.6673 8.6673 93.704 0.0 0.0 0.0 69.47411904393022 14.024174299985006 14.024174299985006 9.262137858390815 0 0.4247425010840047 2.0 0.4247425010840047 0.7614393726401688 + + {I|L}YQNTRSY;{I|L}YQGGTRSY;{I|L}Y[AG]NTRSY;{I|L}Y[AG]GGTRSY;[RH]Q[Q{I|L}]{[CP]|[EA]}Y;[HM]RYY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 8.6673;7.7797;7.7797;6.8972;0.24764;0.067394 +;-;-;-;-;- + 159 + 1 2.463 44624.3 1.0 1399 4010 5408 HBL1_DMSO_200M_050219_2,5411 HBL1_DMSO_200M_050219_2,5411,LYQNTRSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5413 27.665 206.0 227570.0 25 0 12424.0 8174 EPQNSGQSKL 10 81 544.2731687015691 1086.5317844699382 2 544.2732421755791 MULTI CID FTMS 0 0 0 5412 304036.65625 0.7668505293885963 6 -0.1538467407226562 1 Unmodified _EPQNSGQSKL_ ENSG00000158169|ENST00000289081|FANCC 27.628801355627647 0.3479284626772844 4 EPQDT[WK]A{I|L} 9 6 + 70.249 0.0 0.0 6.4654 6.4654 87.461 0.0 0.0 0.0 57.14993324905875 16.478174818886373 16.478174818886373 9.208187539523747 0 0.2742275032520141 1.2218487496163564 0.3807196863200844 0.2887254899964357 EPQDT[WK]A{I|L};EP[AG]DT[WK]A{I|L};WW[NG]Q{[{M(Oxidation (M))|F}H]|[RQ]}{I|L} 6.4654;5.6179;1.0779 -;-;- 132 + 1 2.463 42383.6 1.0 1400 4011 5412 HBL1_DMSO_200M_050219_2,5413 HBL1_DMSO_200M_050219_2,5413,EPQNSGQSKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5414 27.679 800.0 92838.0 25 0 21825.0 -1 0 39 1110.4396507443694 3328.297122833308 3 1110.774462878704 MULTI CID FTMS 0 0 0 5412 195558.3125 0.9101525119867312 -5 0.1026039123535156 2 4 NNT 3 -1 18.232 0.0 0.0 0.54778 0.0 0.0 2367.8584838756765 628.2583712213499 2996.1168550970265 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.4247425010840047 NNT 0.54778 - 89 + 1 2.463 65628.4 0.5400000214576721 1401 4011 5412 HBL1_DMSO_200M_050219_2,5414 HBL1_DMSO_200M_050219_2,5414, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5416 27.685 154.0 338730.0 25 0 37585.0 + 13728 HQVDPTEPVG 10 80 539.7616674085966 1077.5087818839932 2 539.7622558474541 MULTI CID FTMS 0 0 0 5415 464202.46875 0.8369580626200687 4 -0.1108646392822265 1 Unmodified _HQVDPTEPVG_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 36.506200033944 0.1944608063770638 4 [HQ]VDPTE 7 3 43.76 0.0 0.0 4.0613 0.0 0.0 0.0 268.1288871443772 268.1288871443772 36.77062918686282 0.0 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.3807196863200844 + [HQ]VDPTE 4.0613 + + 63 1 2.463 49955.1 1.0 1402 4012 5415 HBL1_DMSO_200M_050219_2,5416 HBL1_DMSO_200M_050219_2,5416,HQVDPTEPVG False True HQVDPTEPVG 27.684634 539.762255847454 9199647.0 5415.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 8.54385503133138 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5417 27.688 146.0 549690.0 25 0 33109.0 + 5564 DMPDDNKRI 9 111 368.510055321038 1102.5083365633138 3 368.5100280642509 MULTI CID FTMS 0 0 0 5415 255086.546875 0.4157474431294101 -7 0.1675643920898437 2 Unmodified _DMPDDNKRI_ ENSG00000165983|ENST00000535784|PTER 17.11289562659939 0.3734572693229295 4 [MD]PDD 5 4 37.928 0.0 0.0 3.4402 0.0 0.0 0.0 526.3110445611936 526.3110445611936 13.18678746489023 0.0 0.0 0.0 0 0.2215141619232908 1.6989700043360187 0.0 0.0 + [MD]PDD 3.4402 + + 168 + 1 2.463 72068.7 1.0 1403 4012 5415 HBL1_DMSO_200M_050219_2,5417 HBL1_DMSO_200M_050219_2,5417,DMPDDNKRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5418 27.701 800.0 115800.0 25 0 10259.0 + 43097 VYNPQSKTY 9 124 550.2742439851851 1098.53393503717 2 550.2736083865166 MULTI CID FTMS 0 0 0 5415 121220.0703125 0.4646263197582436 -6 0.1226692199707031 3 Unmodified _VYNPQSKTY_ ENSG00000154832|ENST00000285106|CXXC1;ENST00000587170.1_1_18:47808965-47809781:-|nuORF;ENST00000587342.1_1_18:47808965-47809814:-|nuORF;ENST00000590901.5_1_18:47808965-47812340:-|nuORF;nc|ENSG00000154832|Q9P0U4-2|CXXC1 51.629811660486645 0.0367964933207742 4 [YV]NPQSKTY 9 0 + 82.66 0.0 0.0 7.5246 7.5246 77.83 0.0 0.0 0.0 60.19631199126941 0.5141591348905905 0.5141591348905905 0.4575749056067479 0 0.9247425010840048 2.0 0.7059771852360797 0.7302046884880937 + + [YV]NPQSKTY;[YV]NPAGSKTY;[YV]GGPQSKTY;[YV]GGPAGSKTY;[YV]N[QA][Q{I|L}]TY;[YV]N[QA]T[Q{I|L}]Y;[MT][HK]QPN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MT][HK]GAPN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MT]{[HG]|PP}KAPN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MT][HK]QPGG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 7.5246;7.483;6.6864;6.6487;3.8672;3.7535;3.515;3.4734;2.743;2.6768 +;-;-;-;-;-;-;-;-;- + 645 + 1 2.463 77021.3 0.5400000214576721 1404 4012 5415 HBL1_DMSO_200M_050219_2,5418 HBL1_DMSO_200M_050219_2,5418,VYNPQSKTY True True VYNPQSKTY 27.701374 550.273608386517 3868882.75 5415.0 ENST00000590901.5_1_18:47808965-47812340:-|nuORF;;ENST00000587342.1_1_18:47808965-47809814:-|nuORF;;nc|ENSG00000154832|Q9P0U4-2|CXXC1;;ENSG00000154832|ENST00000285106|CXXC1;;ENST00000587170.1_1_18:47808965-47809781:-|nuORF 8.295225302378336 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5419 27.715 800.0 56017.0 25 0 4353.7 -1 CMFIYIKPSAN 11 80 651.8121580236236 1301.6097631140472 2 651.8134033083916 MULTI CID FTMS 0 0 0 5415 103920.25 1.0 0 0.0 4 Oxidation (M) _CM(Oxidation (M))FIYIKPSAN_ ENSG00000184954|ENST00000327335|OR6C70 17.44264345198275 0.6723198055858692 4 PSQSAN 6 -1 67.211 0.0 0.0 5.1637 0.0 0.0 699.3445987166278 0.0 699.3445987166278 0.0 54.63754473075081 0.0 0.0 0 1.5 0.0 0.805462187404089 0.0 PSQSAN 5.1637 - 109 1 2.463 39853.9 0.4600000083446502 1405 4012 5415 HBL1_DMSO_200M_050219_2,5419 HBL1_DMSO_200M_050219_2,5419,CMFIYIKPSAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5421 27.72 13.0 4104400.0 25 0 465480.0 + 32 AAAPPAKEI 9 72 434.2503355951893 866.4861182571786 2 434.2504150271416 MULTI CID FTMS 0 0 0 5420 4837252.5 0.6390134817937231 10 -0.1947231292724609 1 Unmodified _AAAPPAKEI_ ENSG00000166851|ENST00000300093|PLK1 29.081581746732265 0.1611639662936252 4 [PA]KEP 5 5 33.188 0.0 0.0 3.8301 0.0 0.0 0.0 341.1870209273537 341.1870209273537 0.7403126772771884 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3494850021680094 0.0 [PA]KEP 3.8301 - 69 1 2.463 43387.1 1.0 1406 4013 5420 HBL1_DMSO_200M_050219_2,5421 HBL1_DMSO_200M_050219_2,5421,AAAPPAKEI False True AAAPPAKEI 27.719692 434.250415027142 424890200.0 5420.0 ENSG00000166851|ENST00000300093|PLK1 5.386806964874268 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5422 27.721 42.0 952980.0 25 0 247030.0 + 2925 AVGPVHNSV 9 58 440.2377040314023 878.4608551296046 2 440.2377807497978 MULTI CID FTMS 0 0 0 5420 1353039.75 0.8231575774204715 3 -0.0749797821044921 2 Unmodified _AVGPVHNSV_ ENSG00000115760|ENST00000421745|BIRC6 34.40172386719151 0.1061884637610825 4 {[VA]|[{I|L}G]}GPV[HN]SV 9 0 + 49.12 0.0 0.0 5.5916 5.5916 85.383 0.0 0.0 0.0 30.1237896466008 3.6181873724173386 3.6181873724173386 10.24613421077092 0 0.805462187404089 2.0 0.0 0.3494850021680094 + + {[VA]|[{I|L}G]}GPV[HN]SV;{[VA]|[{I|L}G]}G[YN]S[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}[YN]S[R{I|L}] 5.5916;4.4252;1.1924 +;-;- + 71 + 1 2.463 36875.1 1.0 1407 4013 5420 HBL1_DMSO_200M_050219_2,5422 HBL1_DMSO_200M_050219_2,5422,AVGPVHNSV True True AVGPVHNSV 27.720872 440.237780749798 22507868.0 5420.0 ENSG00000115760|ENST00000421745|BIRC6 8.723535219828287 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5423 27.724 132.0 420340.0 25 0 31253.0 + 30413 RAYQKQPTI 9 91 552.8116016465897 1103.6086503599793 2 552.8117553591728 MULTI CID FTMS 0 0 0 5420 396015.75 0.566161659709809 7 -0.1539554595947265 3 Unmodified _RAYQKQPTI_ ENSG00000142534|ENST00000270625|RPS11;ENST00000599167.5_1_19:49999677-50000690:+|nuORF;ENST00000600027.5_1_19:49999677-50000944:+|nuORF 36.12702656103203 0.0967173616627612 4 QKQPT{I|L} 6 3 37.73 0.0 0.0 3.4188 0.0 0.0 390.2008534162125 0.0 390.2008534162125 0.0 7.139764356889184 0.0 0.0 0 0.7742275032520141 0.0 0.5 0.3807196863200844 + QKQPT{I|L} 3.4188 + + 138 1 2.463 51428.0 1.0 1408 4013 5420 HBL1_DMSO_200M_050219_2,5423 HBL1_DMSO_200M_050219_2,5423,RAYQKQPTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5425 27.741 800.0 153300.0 25 0 13189.0 24587 MLIAECWMSEV 11 129 437.8632179120823 1310.5678243364468 3 437.8632385134697 MULTI CID FTMS 0 0 0 5424 87508.0546875 0.4465767184464579 61 -0.7778129577636719 1 Unmodified _MLIAECWMSEV_ ENSG00000158125|ENST00000379416|XDH 2.434785330301024 0.8636604596255422 4 M{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}CSQ 6 7 15.864 0.0 0.0 1.2104 0.0 0.0 0.0 624.3386047482041 624.3386047482041 4.443666746188432 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}CSQ 1.2104 - 102 + 1 2.447 99962.0 0.4399999976158142 1409 4014 5424 HBL1_DMSO_200M_050219_2,5425 HBL1_DMSO_200M_050219_2,5425,MLIAECWMSEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5426 27.755 800.0 192300.0 25 0 23838.0 + 43824 YFEDRRPSA 9 143 380.8529569388161 1139.5370414166484 3 380.8528015017509 MULTI CID FTMS 0 0 0 5424 130318.5234375 0.6219179480579348 -2 0.0442657470703125 2 Unmodified _YFEDRRPSA_ ENSG00000135821|ENST00000331872|GLUL 29.84058131909904 0.1515068451768857 4 Y{M(Oxidation (M))|F}EDR 5 4 45.49 0.0 0.0 3.9919 0.0 0.0 0.0 426.2103670709594 426.2103670709594 26.10924374808178 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.805462187404089 + Y{M(Oxidation (M))|F}EDR 3.9919 + + 215 + 1 2.447 126536.8 0.4900000095367431 1410 4014 5424 HBL1_DMSO_200M_050219_2,5426 HBL1_DMSO_200M_050219_2,5426,YFEDRRPSA False True YFEDRRPSA 27.75479 380.852801501751 1237862.875 5424.0 ENSG00000135821|ENST00000331872|GLUL 4.399799704551697 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5427 27.769 800.0 25416.0 25 0 6338.5 -1 0 36 977.4159682930376 2929.2260754793124 3 977.4158203005792 MULTI CID FTMS 0 0 0 5424 75405.328125 0.535831594487107 12 -0.2691574096679687 3 4 T 1 -1 4.6041 0.0 0.0 0.15718 0.0 0.0 1555.1370384693498 1270.0060518854127 2825.1430903547625 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.15718 - 5 + 1 2.447 23431.5 0.3499999940395355 1411 4014 5424 HBL1_DMSO_200M_050219_2,5427 HBL1_DMSO_200M_050219_2,5427, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5429 27.774 141.0 407600.0 25 0 45947.0 + 5802 DPPQPNHSI 9 90 502.74350445355566 1003.4724559739112 2 502.7431518435478 MULTI CID FTMS 0 0 0 5428 334559.625 0.8694557709099981 1 -0.0215282440185546 1 Unmodified _DPPQPNHSI_ ENSG00000106948|ENST00000374088|AKNA;ENST00000223791.7_2_9:117130488-117139135:-|nuORF;nc|ENSG00000106948|Q7Z591-2|AKNA;nc|ENSG00000106948|Q7Z591-3|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA 47.74868867922204 0.0453060283459952 4 [DP]PQ[NP]H{[TV]|[{I|L}S]} 9 0 + 40.919 0.0 0.0 4.0777 4.0777 79.459 0.0 0.0 0.0 28.67869746628846 9.366130211356063 9.366130211356063 10.853481135844874 0 0.8935078169319297 2.0 0.6109243748081782 0.3252574989159953 + + [DP]PQ[NP]H{[TV]|[{I|L}S]};[DP]PQ[QT][YR];[QP][C(Carbamidomethyl (C))H][R{I|L}]{[HG]|PP} 4.0777;2.9961;0.48116 +;-;- + 119 + 1 2.447 51408.2 1.0 1412 4015 5428 HBL1_DMSO_200M_050219_2,5429 HBL1_DMSO_200M_050219_2,5429,DPPQPNHSI True True DPPQPNHSI 27.773723 502.743151843548 9159270.0 5428.0 nc|ENSG00000106948|Q7Z591-7|AKNA;;nc|ENSG00000106948|Q7Z591-2|AKNA;;ENST00000223791.7_2_9:117130488-117139135:-|nuORF;;ENSG00000106948|ENST00000374088|AKNA;;nc|ENSG00000106948|Q7Z591-3|AKNA 7.424457550048828 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5430 27.776 125.0 452610.0 25 0 52666.0 + 5565 DMPDDNKRI 9 76 552.2603726677418 1102.5061924022834 2 552.2609130740166 MULTI CID FTMS 0 0 0 5428 292424.125 0.8544936569344173 -3 0.0893363952636718 2 Unmodified _DMPDDNKRI_ ENSG00000165983|ENST00000535784|PTER 12.240655878213236 0.5053430591993562 4 [MD]PDD 5 4 35.986 0.0 0.0 3.2641 0.0 0.0 0.0 526.3123873346311 526.3123873346311 19.78855930516417 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 + [MD]PDD 3.2641 + + 62 + 1 2.447 52003.2 1.0 1413 4015 5428 HBL1_DMSO_200M_050219_2,5430 HBL1_DMSO_200M_050219_2,5430,DMPDDNKRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5431 27.79 800.0 181550.0 25 0 23085.0 23099 LSNNDMDQQ 9 124 532.7199455656987 1063.425338198197 2 532.7200805544853 MULTI CID FTMS 0 0 0 5428 93069.171875 0.5933716885364644 -2 0.0534515380859375 3 Unmodified _LSNNDMDQQ_ ENST00000409947.5_1_2:128062098-128062383:-|nuORF 17.11289562659939 0.3734572693229295 4 {I|L}Q 2 7 26.638 0.0 0.0 2.5049 0.0 0.0 0.0 819.262364535383 819.262364535383 2.9214470887012567 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 {I|L}Q 2.5049 - 278 + 1 2.447 116187.4 0.4699999988079071 1414 4015 5428 HBL1_DMSO_200M_050219_2,5431 HBL1_DMSO_200M_050219_2,5431,LSNNDMDQQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5433 27.795 5.7 7307000.0 25 0 700370.0 + 34804 SQEGRPVQV 9 76 500.2647376352127 998.5149223372256 2 500.2647888064384 MULTI CID FTMS 0 0 0 5432 10293952.0 0.9367047095155412 2 -0.0267925262451171 1 Unmodified _SQEGRPVQV_ ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 55.50274090549119 0.0285720310785888 4 {[QS]|[NT]}EVN[VP]Q 8 3 39.657 0.0 0.0 3.9716 0.0 0.0 0.0 114.05878155036922 114.05878155036922 24.775071725447404 0.0 0.0 0.0 0 1.8182503180159344 1.0457574905606752 0.2614393726401688 0.3252574989159953 {[QS]|[NT]}EVN[VP]Q 3.9716 - 126 1 2.447 40027.3 1.0 1415 4016 5432 HBL1_DMSO_200M_050219_2,5433 HBL1_DMSO_200M_050219_2,5433,SQEGRPVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5434 27.799 219.0 378810.0 25 0 62657.0 + 33254 SFPASSGVSH 10 99 488.23034326897925 974.4461336047584 2 488.2305786013603 MULTI CID FTMS 0 0 0 5432 272680.96875 0.3700744899839141 -93 1.6337871551513672 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 41.8396318013385 0.1381409678234242 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 57.387 0.0 0.0 5.8892 5.8892 83.049 0.0 0.0 0.0 29.190111907005765 9.197275526017629 9.197275526017629 7.716525140920609 0 0.3807196863200844 2.0 0.6747425010840047 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[SG]VH;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}CAPDT;{[QN]|[E{I|L}]|[KN]}[KQ]SH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 5.8892;5.0973;4.8729;3.3607;0.57424 +;-;-;-;- + 217 + 1 2.447 70579.9 1.0 1416 4016 5432 HBL1_DMSO_200M_050219_2,5434 HBL1_DMSO_200M_050219_2,5434,SFPASSGVSH False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5435 27.813 800.0 101420.0 25 0 7957.3 + 3106 AVPDKINQA 9 116 478.2643598629559 954.514166792712 2 478.2649719119072 MULTI CID FTMS 0 0 0 5432 91024.1015625 0.6506840593676878 -3 0.0749797821044921 3 Unmodified _AVPDKINQA_ ENSG00000164307|ENST00000443439|ERAP1;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1 32.30548876998284 0.1201446275138228 4 {[VA]|[{I|L}G]}P{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}K 7 5 38.377 0.0 0.0 4.0205 0.0 0.0 0.0 209.05666528873283 209.05666528873283 28.46185200836155 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.805462187404089 {[VA]|[{I|L}G]}P{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}K 4.0205 - 275 + 1 2.447 66714.6 0.4600000083446502 1417 4016 5432 HBL1_DMSO_200M_050219_2,5435 HBL1_DMSO_200M_050219_2,5435,AVPDKINQA True True AVPDKINQA 27.812955 478.264971911907 582768.1875 5432.0 nc|ENSG00000164307|Q9NZ08-2|ERAP1;;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;;ENSG00000164307|ENST00000443439|ERAP1 4.340626160303752 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5438 27.823 174.0 322460.0 25 0 27533.0 + + 26945 DPYSVKRNV 9 79 538.7904983636968 1075.5664437941934 2 539.2889892458916 MULTI CID FTMS 0 0 0 5437 224081.546875 0.6172672861253811 -2 0.0267925262451171 1 Unmodified _PDYSVLLRN_ nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7;ENSG00000083223|ENST00000375963|TUT7 16.942295170755138 0.3780752226737986 4 NPYSVK 6 -1 38.136 0.0 0.0 3.5457 0.0 0.0 0.0 384.20029627017817 384.20029627017817 13.209478339592875 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NPYSVK 3.5457 - 127 + 1 2.442 49328.1 1.0 1418 4018 5437 HBL1_DMSO_200M_050219_2,5438 HBL1_DMSO_200M_050219_2,5438,PDYSVLLRN False False DPYSVKRNV 27.822611 539.288989245892 2799067.0 5437.0 nc|ENSG00000083223|Q5VYS8-4|TUT7;;nc|ENSG00000083223|Q5VYS8-6|TUT7;;ENSG00000083223|ENST00000375963|TUT7 5.361612637837728 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5439 27.836 800.0 194320.0 25 0 5453.4 + 30287 QYPNGTHAY 9 157 525.7353337367373 1049.4561145402745 2 525.7375976443291 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _QYPNGTHAY_ ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C 26.88365393820708 0.1891292719743517 4 [YQ]PN[C(Carbamidomethyl (C))Q]Q{I|L} 8 5 + 39.235 0.0 0.0 3.7386 3.7386 69.295 0.0 0.0 0.0 13.343890745964046 3.5604158868846554 3.5604158868846554 3.133345013315278 0 0.7887254899964358 2.0 0.0 0.7302046884880937 [YQ]PN[C(Carbamidomethyl (C))Q]Q{I|L};[YQ]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QHQ{I|L};[YQ]PGG[C(Carbamidomethyl (C))Q]Q{I|L};[YQ]PN[C(Carbamidomethyl (C))Q][AG]{I|L};[YQ]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]HQ{I|L};[YQ]PN{[SA]|[TG]}[HA]Y;[YQ]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QH[AG]{I|L};[YQ]PN{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TPP;[{M(Oxidation (M))|F}V]{[YD]|[{M(Oxidation (M))|F}M]}EHQ{I|L};[YQ]PN[C(Carbamidomethyl (C))Q]AAV 3.7386;3.44;2.856;2.5649;2.5574;2.5486;2.2664;2.1851;1.9545;1.7602 -;-;-;-;-;+;-;-;-;- + 1213 + 1 2.442 121067.3 0.6100000143051147 1419 4018 5437 HBL1_DMSO_200M_050219_2,5439 HBL1_DMSO_200M_050219_2,5439,QYPNGTHAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5441 27.841 99.0 672810.0 25 0 108450.0 + 18384 KVRDLEVK 8 75 493.8034508912368 985.5923488492735 2 493.8035156130791 MULTI CID FTMS 0 0 0 5440 713643.375 0.8806680070451627 3 -0.0695953369140625 1 Unmodified _KVRDLEVK_ REV__ENSG00000155363|ENST00000369645|MOV10;REV__ENST00000468624.5_1_1:113217534-113241292:+|nuORF;REV__ENST00000496577.5_1_1:113231344-113241292:+|nuORF;REV__nc|ENSG00000155363|Q9HCE1-2|MOV10 24.020572477871973 0.5389365498350341 4 {M(Oxidation (M))|F}TVK 4 -1 47.423 0.0 0.0 4.8116 0.0 0.0 492.29524428535314 0.0 492.29524428535314 0.0 25.996075289514096 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}TVK 4.8116 - 131 1 2.442 57920.6 1.0 1420 4019 5440 HBL1_DMSO_200M_050219_2,5441 HBL1_DMSO_200M_050219_2,5441,KVRDLEVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5442 27.855 800.0 121060.0 25 0 8386.5 + 236 AAVRDISEA 9 131 466.2459102008172 930.4772674684344 2 466.2454406619072 MULTI CID FTMS 0 0 0 5440 106484.8046875 0.0240198458602486 -14 0.3247737884521484 2 Unmodified _AAVRDISEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF 57.72198328787511 0.0273433238377839 4 AA[RV]D{I|L}SEA 9 0 + 56.172 0.0 0.0 6.0369 6.0369 87.362 0.0 0.0 0.0 13.022810465164362 28.37303023283864 13.022810465164362 10.846055073405113 0 1.4634679910804405 1.5228787452803376 0.4247425010840047 0.0 + + AA[RV]D{I|L}SEA;AA[RV]{[TV]|[{I|L}S]}DEA;{[TV]|[{I|L}S]}[RV]AADEA;AA[RV]MGV{NN|[MP]|[D{I|L}]|[EV]};{[ES]|[DT]|[{I|L}C]}A[K{I|L}]GNAAA;{[ES]|[DT]|[{I|L}C]}A[K{I|L}]GQQA;{[CP]|[EA]}S[K{I|L}]GNAAA;{[CP]|[EA]}S[K{I|L}]GQQA;{[TV]|[{I|L}S]}[RV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EA;{[ES]|[DT]|[{I|L}C]}A[K{I|L}]GV{NN|[MP]|[D{I|L}]|[EV]} 6.0369;4.8713;1.9461;1.8828;1.5867;1.5318;1.5011;1.4461;1.2499;0.56252 +;-;-;-;-;-;-;-;-;- + 458 1 2.442 78685.8 0.4900000095367431 1421 4019 5440 HBL1_DMSO_200M_050219_2,5442 HBL1_DMSO_200M_050219_2,5442,AAVRDISEA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5443 27.869 800.0 101240.0 25 0 9741.8 + 2597 ASNDYTQQATQ 11 110 634.7730566586033 1267.5315603840063 2 634.7740356326103 MULTI CID FTMS 0 0 0 5440 101053.5234375 0.1513982193351108 -12 0.2433795928955078 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNDYTQQATQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 67.08073823543168 0.0408645806987127 4 [DN]S[YT]QQ{I|L}ATQ 11 4 [DN]S[YT]QQ{I|L} + + 42.769 13.704 1.4435 3.3742 3.3742 46.873 0.0 0.0 0.0 0.0 3.7909474469610345 0.0 0.0 0 0.5 0.0 0.805462187404089 0.7742275032520141 [DN]S[YT]QQ{I|L}ATQ 3.3742 - 1730 + 1 2.442 65561.7 0.4799999892711639 1422 4019 5440 HBL1_DMSO_200M_050219_2,5443 HBL1_DMSO_200M_050219_2,5443,ASNDYTQQATQ True False ASNDYTQQATQ 27.869048 634.77403563261 8706564.0 5440.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 6.685364723205566 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5445 27.874 11.0 3736600.0 25 0 610650.0 + 35080 SQVEGEHQL 9 64 513.7459582911663 1025.4773636491325 2 513.7464477419853 MULTI CID FTMS 0 0 0 5444 5276995.5 0.7174615706684274 4 -0.0593090057373046 1 Unmodified _SQVEGEHQL_ ENSG00000117724|ENST00000366955|CENPF 51.629811660486645 0.0367964933207742 4 {[QS]|[NT]}VE{[DA]|[EG]}H[Q{I|L}] 9 0 + 50.567 0.0 0.0 4.9311 4.9311 86.316 0.0 0.0 0.0 33.572187891318706 7.195371514980806 7.195371514980806 50.56697238076367 0 0.8807196863200843 1.154901959985743 0.3807196863200844 0.9802046884880936 + + {[QS]|[NT]}VE{[DA]|[EG]}H[Q{I|L}] 4.9311 + + 118 + 1 2.442 37236.4 1.0 1423 4020 5444 HBL1_DMSO_200M_050219_2,5445 HBL1_DMSO_200M_050219_2,5445,SQVEGEHQL True True SQVEGEHQL 27.87365 513.746447741985 96079008.0 5444.0 ENSG00000117724|ENST00000366955|CENPF 8.67990239461263 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5446 27.876 88.0 858850.0 25 0 239220.0 + 43823 YFEDRRPSA 9 66 570.7750351431292 1139.5355173530584 2 570.7753784060478 MULTI CID FTMS 0 0 0 5444 807179.0 1.0 0 0.0 2 Unmodified _YFEDRRPSA_ ENSG00000135821|ENST00000331872|GLUL 24.020572477871973 0.2255576514309169 4 A{[DS]|[MA]|[CV]|TT}P 4 7 18.94 0.0 0.0 1.6621 0.0 0.0 0.0 766.3424776666624 766.3424776666624 7.257724967479858 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 A{[DS]|[MA]|[CV]|TT}P 1.6621 - 55 + 1 2.442 61891.0 1.0 1424 4020 5444 HBL1_DMSO_200M_050219_2,5446 HBL1_DMSO_200M_050219_2,5446,YFEDRRPSA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5447 27.881 284.0 484870.0 25 0 46812.0 + 13059 HAYSVRRL 8 132 334.5265118385255 1000.5577061157765 3 334.5259277224541 MULTI CID FTMS 0 0 0 5444 246741.59375 0.2234521534038842 -9 0.2099056243896484 3 Unmodified _HAYSVRRL_ ENSG00000213983|ENST00000397120|AP1G2;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF;ENST00000554554.5_1_14:24032570-24032684:-|nuORF;ENST00000554982.5_1_14:24031495-24032684:-|nuORF;ENST00000557132.1_1_14:24032416-24032684:-|nuORF 34.10243960390752 0.3329570729325616 4 HA{I|L} 3 5 41.515 0.0 0.0 4.1492 0.0 0.0 0.0 676.3547397638503 676.3547397638503 20.546218740408904 0.0 0.0 0.0 0 0.6109243748081782 1.2218487496163564 0.0 0.0 HA{I|L} 4.1492 - 105 + 1 2.442 113349.9 1.0 1425 4020 5444 HBL1_DMSO_200M_050219_2,5447 HBL1_DMSO_200M_050219_2,5447,HAYSVRRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5448 27.889 432.0 185150.0 25 0 48912.0 -1 0 81 470.282078147562 469.274801680962 1 470.2820312380791 MULTI CID FTMS 0 0 0 5444 213612.28125 0.8924951909323565 1 -0.0283699035644531 4 4 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 2.6582 0.0 0.0 304.2284435040073 0.0 304.2284435040073 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.6582 - 55 + 1 2.442 77920.1 1.0 1426 4020 5444 HBL1_DMSO_200M_050219_2,5448 HBL1_DMSO_200M_050219_2,5448, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5449 27.897 501.0 134740.0 25 0 5481.9 -1 CLVSDSPEGS 10 117 525.726696282697 0 525.7269775271416 PEAK CID FTMS 0 0 0 5444 126830.03125 1.0 0 0.0 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))LVSDSPEGS_ ENSG00000108309|ENST00000426726|RUNDC3A;ENST00000590834.5_1_17:42393912-42395603:+|nuORF 10.823927491677226 0.3685635357628707 4 PN 2 -1 9.6309 0.0 0.0 0.91772 0.0 0.0 291.10364497109384 544.2166231744749 835.3202681455687 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 PN 0.91772 - 142 + 1 2.442 58911.7 1.0 1427 4020 5444 HBL1_DMSO_200M_050219_2,5449 HBL1_DMSO_200M_050219_2,5449,CLVSDSPEGS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5451 27.902 120.0 339410.0 25 0 15837.0 + 13991 HYYEGGNSQY 10 64 609.2466736374922 1216.4787943417844 2 609.2468139529228 MULTI CID FTMS 0 0 0 5450 510722.1875 0.6446480646803714 2 -0.0123977661132812 1 Unmodified _HYYEGGNSQY_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-3|SS18L1;nc|ENSG00000184402|O75177-4|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 69.10491478415734 0.0189654488676922 4 {[WN]|[YH]}YEGGNSQY 10 0 + 97.044 0.0 0.0 7.9775 7.9775 88.641 0.0 0.0 0.0 22.498774732166 84.59691590396389 22.498774732166 6.53212513775344 0 0.7614393726401688 1.5228787452803376 1.305462187404089 0.0 + + {[WN]|[YH]}YEGGNSQY;{[WN]|[YH]}YENNSQY;{[WN]|[YH]}YEGGNS[AG]Y;{[WN]|[YH]}YEGGGGSQY;{[WN]|[YH]}YENGGSQY;{[WN]|[YH]}YENNS[AG]Y;{[WN]|[YH]}YEGGGGS[AG]Y;{[WN]|[YH]}YENGGS[AG]Y;{[QS]|[NT]}[{M(Oxidation (M))|F}T]WGNSQY;[YE]{[WN]|[YH]}GGNSQY 7.9775;7.4405;7.2241;7.2241;6.6835;6.6835;6.4737;5.9302;5.4715;5.1842 +;-;-;-;-;-;-;-;-;- + 602 1 2.442 37889.6 1.0 1428 4021 5450 HBL1_DMSO_200M_050219_2,5451 HBL1_DMSO_200M_050219_2,5451,HYYEGGNSQY True True HYYEGGNSQY 27.902273 609.246813952923 10380686.0 5450.0 nc|ENSG00000184402|O75177-4|SS18L1;;ENSG00000184402|ENST00000331758|SS18L1;;nc|ENSG00000184402|O75177-3|SS18L1;;ENSG00000141380|ENST00000415083|SS18;;nc|ENSG00000184402|O75177-5|SS18L1;;nc|ENSG00000184402|O75177-2|SS18L1 9.064782937367758 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5452 27.906 189.0 538340.0 25 0 69655.0 + 44874 YPPHVQKV 8 110 323.1838573595554 966.5297426788665 3 323.1834594607353 MULTI CID FTMS 0 0 0 5450 231278.140625 0.6034060819356738 85 -1.2725067138671875 2 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 15.847184025352805 0.6768015514314958 4 YPPHVQKV 8 0 + 58.313 0.0 0.0 6.0333 6.0333 77.767 0.0 0.0 0.0 31.638568026386693 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.0 1.5228787452803376 0.0 0.0 + + YPPHVQKV;YPPHVQVK;YPPVHQKV;YPPVHQVK;YPVPHQKV;YPPHV[AG]KV;YPVPHQVK;YPPHV[AG]VK;YPPVH[AG]KV;YPPVH[AG]VK 6.0333;5.7218;5.6216;5.3101;5.1279;5.075;4.8165;4.7635;4.6633;4.3518 +;-;-;-;-;-;-;-;-;- + 231 + 1 2.442 86464.7 1.0 1429 4021 5450 HBL1_DMSO_200M_050219_2,5452 HBL1_DMSO_200M_050219_2,5452,YPPHVQKV False True YPPHVQKV 27.905906 323.183459460735 85001384.0 5450.0 nc|ENSG00000112701|Q9GZR1-2|SENP6;;ENSG00000112701|ENST00000447266|SENP6 6.5500515302022295 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5455 27.914 79.0 603480.0 25 0 45119.0 + 28910 QAPPPPQQV 9 89 481.2586875982422 960.5028222632844 2 481.2588378787041 MULTI CID FTMS 0 0 0 5454 668477.5625 0.1132074826645753 77 -1.1534385681152344 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 78.14939416004806 0.0179651292570206 4 [QA]PPPPQQV 9 0 + 53.101 0.0 0.0 5.5284 5.5284 83.712 0.0 0.0 0.0 18.65401796134641 6.879617791072832 6.879617791072832 9.208187539523747 0 1.5044321917401078 1.3010299956639813 0.0 0.5994850021680094 + + [QA]PPPPQQV;[QA]PPPP[AG]QV;[PG]APAPPQQV;[QP]PAPPQQV;[QP]APPPQQV;[QA]P[YK]QQV;[PG]AAPPPQQV;[QA][YK]PQQV;[PG]APPPAQQV;[QP]PPPAQQV 5.5284;4.5697;3.5863;3.403;3.14;3.0081;2.9595;2.9576;2.8824;2.6991 +;-;-;-;-;-;-;-;-;- + 440 1 2.442 43739.6 1.0 1430 4023 5454 HBL1_DMSO_200M_050219_2,5455 HBL1_DMSO_200M_050219_2,5455,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5456 27.928 800.0 120590.0 25 0 10028.0 + 4863 DGAPPSNQI 9 136 449.7169891694584 897.4194254057168 2 449.7169982790947 MULTI CID FTMS 0 0 0 5454 95998.9140625 0.2439921224282447 -58 1.0143985748291016 2 Unmodified _DGAPPSNQI_ ENSG00000112245|ENST00000626021|PTP4A1 30.63653989081413 0.1413794767160703 4 [DG]AP 4 5 34.521 0.0 0.0 3.8466 0.0 0.0 0.0 554.2586642575324 554.2586642575324 19.035984316004217 0.0 0.0 0.0 0 0.8807196863200843 1.3010299956639813 0.0 0.0 + [DG]AP 3.8466 + + 181 1 2.442 79704.8 0.5699999928474426 1431 4023 5454 HBL1_DMSO_200M_050219_2,5456 HBL1_DMSO_200M_050219_2,5456,DGAPPSNQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5458 27.945 800.0 85149.0 25 0 19747.0 -1 0 44 1110.4396507443694 3328.297122833308 3 1110.772998034954 MULTI CID FTMS 0 0 0 5457 146796.140625 0.6832073483953855 8 -0.1368026733398437 1 4 E 1 -1 6.9897 0.0 0.0 0.21001 0.0 0.0 2672.068827444452 524.1621798150999 3196.231007259552 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21001 - 10 + 1 2.442 65936.4 0.4600000083446502 1432 4024 5457 HBL1_DMSO_200M_050219_2,5458 HBL1_DMSO_200M_050219_2,5458, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5459 27.958 800.0 200010.0 25 0 31626.0 + 3797 DAIENKTTV 9 154 495.7589533787203 989.5033538242408 2 495.7588073611259 MULTI CID FTMS 0 0 0 5457 191424.40625 0.088060504781354 -16 0.3293418884277344 2 Unmodified _DAIENKTTV_ ENSG00000130119|ENST00000360845|GNL3L 61.60191391372663 0.0251951588191061 4 {[DA]|[EG]}{I|L}ENKTTV 9 0 + 74.478 0.0 0.0 7.5268 7.5268 90.823 0.0 0.0 0.0 15.6687674038008 12.98332479720628 12.98332479720628 9.208187539523747 0 1.524227503252014 2.0 0.6382104921644451 0.0 + + {[DA]|[EG]}{I|L}ENKTTV;{[DA]|[EG]}{I|L}EGGKTTV;{[DA]|[EG]}GKT{I|L}DATV;{[DA]|[EG]}GKTTPTTV;{[DA]|[EG]}{I|L}GKTDATV;{[DA]|[EG]}GK{I|L}TDATV;{[DA]|[EG]}G{I|L}KTDATV;{[QN]|[E{I|L}]|[KN]}GHHPTTV;{[QN]|[E{I|L}]|[KN]}GGKTDATV;{[SA]|[TG]}{[NV]|[RG]}T{I|L}DATV 7.5268;6.5962;5.9996;5.8052;5.204;4.9846;4.0784;3.8904;3.8144;3.4398 +;-;-;-;-;-;-;-;-;- + 2453 + 1 2.442 121857.8 0.7099999785423279 1433 4024 5457 HBL1_DMSO_200M_050219_2,5459 HBL1_DMSO_200M_050219_2,5459,DAIENKTTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5460 27.972 800.0 116380.0 25 0 5245.7 + 8188 EPSETQRQL 9 127 544.2731687015691 1086.5317844699382 2 544.2735473513603 MULTI CID FTMS 0 0 0 5457 136458.453125 0.3441796732970589 19 -0.2565155029296875 3 Unmodified _EPSETQRQL_ REV__ENST00000216968.4_1_20:33764858-33765056:+|nuORF 25.399314129420983 0.2080152500878129 4 EPQDT[WK]A{I|L} 9 -1 + 59.074 0.0 0.0 5.4369 5.4369 83.361 0.0 0.0 0.0 39.60965669463064 12.764706236572472 12.764706236572472 9.208187539523747 0 0.1923877696554315 1.154901959985743 0.3054621874040891 0.3494850021680094 EPQDT[WK]A{I|L};EP[AG]DT[WK]A{I|L};EP[WM]K{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};[QP]EDT[WK]A{I|L};EPQ[{M(Oxidation (M))|F}V]{[QS]|[NT]}V[PG] 5.4369;4.5894;2.9652;2.6461;2.5703 -;-;-;-;- 406 + 1 2.442 76353.4 0.5899999737739563 1434 4024 5457 HBL1_DMSO_200M_050219_2,5460 HBL1_DMSO_200M_050219_2,5460,EPSETQRQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5462 27.979 121.0 534530.0 25 0 71650.0 + -1 DMPDDNKRI 9 87 368.510055321038 1102.5083365633138 3 368.5099670290947 MULTI CID FTMS 0 0 0 5461 314419.84375 0.5124505690700634 6 -0.088897705078125 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))GPDLTAQRG_ ENSG00000165983|ENST00000535784|PTER 9.764250979337303 0.6814711177547602 4 [MD]PDD 5 -1 39.208 0.0 0.0 3.5563 0.0 0.0 0.0 526.3104952447874 526.3104952447874 26.44348130295128 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [MD]PDD 3.5563 - 37 + 1 2.442 58094.2 1.0 1435 4025 5461 HBL1_DMSO_200M_050219_2,5462 HBL1_DMSO_200M_050219_2,5462,MGPDLTAQRG False False DMPDDNKRI 27.978614 368.509967029095 10468226.0 5461.0 ENSG00000165983|ENST00000535784|PTER 3.924869139989217 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5463 27.992 800.0 144190.0 25 0 5064.9 + 24072 LYDSQCGSPFA 11 128 594.2573588198552 1186.5001647065103 2 594.2573119997978 MULTI CID FTMS 0 0 0 5461 159561.1875 0.3744060215190641 -15 0.3213539123535156 2 Unmodified _LYDSQCGSPFA_ REV__ENST00000522969.1_1_8:1808097-1817553:+|nuORF 27.628801355627647 0.4434699450731472 4 [HQ]DEAQQNA{M(Oxidation (M))|F} 10 -1 + 83.499 0.0 0.0 7.0374 7.0374 88.673 0.0 0.0 0.0 11.84601128754231 8.947340481202062 8.947340481202062 9.164539485499247 0 0.8182503180159344 0.7695510786217261 1.9991348669726232 3.079689690656103 [HQ]DEAQQNA{M(Oxidation (M))|F};[HQ]DEA[AG]QNA{M(Oxidation (M))|F};[HQ]DEAQ[AG]NA{M(Oxidation (M))|F};[HQ]DEAQQGGA{M(Oxidation (M))|F};[AG]HDEAQQNA{M(Oxidation (M))|F};[HQ]DEA[AG]QGGA{M(Oxidation (M))|F};[HQ]DEA[AG][AG]NA{M(Oxidation (M))|F};[HQ]DEAQ[AG]GGA{M(Oxidation (M))|F};[AG]HDEAQQGGA{M(Oxidation (M))|F};[AG]HDEAQ[AG]NA{M(Oxidation (M))|F} 7.0374;6.265;6.265;6.265;6.039;5.4957;5.4957;5.4957;5.2697;5.2697 -;-;-;-;-;-;-;-;-;- 2146 1 2.442 88045.8 0.6299999952316284 1436 4025 5461 HBL1_DMSO_200M_050219_2,5463 HBL1_DMSO_200M_050219_2,5463,LYDSQCGSPFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5465 27.997 32.0 1633500.0 25 0 189270.0 + 19 AAAIPEAKP 9 64 434.2503355951893 866.4861182571786 2 434.2503845095634 MULTI CID FTMS 0 0 0 5464 1674784.875 0.2212433843859123 23 -0.2359657287597656 1 Unmodified _AAAIPEAKP_ REV__ENST00000444241.1_1_1:76209858-76210371:-|nuORF 15.847184025352805 0.4077185912009129 4 [PA]KEP 5 -1 30.802 0.0 0.0 3.5548 0.0 0.0 0.0 341.1837860640724 341.1837860640724 0.1156189942356888 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [PA]KEP 3.5548 - 65 1 2.442 49417.2 1.0 1437 4026 5464 HBL1_DMSO_200M_050219_2,5465 HBL1_DMSO_200M_050219_2,5465,AAAIPEAKP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5466 28.004 352.0 185510.0 25 0 14652.0 -1 HHCLPWAYPM 10 102 437.8632179120823 1310.5678243364468 3 437.8635742068291 MULTI CID FTMS 0 0 0 5464 94307.234375 0.4812747284046805 73 -1.0326156616210938 2 Carbamidomethyl (C) _HHC(Carbamidomethyl (C))LPWAYPM_ ENST00000533086.5_1_19:15225833-15226058:-|nuORF 4.189502756095605 0.7072575900373772 4 CSPM 4 -1 25.522 0.0 0.0 1.9474 0.0 0.0 874.4354218922322 0.0 874.4354218922322 0.0 7.562893943202624 0.0 0.0 0 0.5 0.0 0.0 0.0 CSPM 1.9474 - 107 1 2.442 53068.1 1.0 1438 4026 5464 HBL1_DMSO_200M_050219_2,5466 HBL1_DMSO_200M_050219_2,5466,HHCLPWAYPM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5468 28.02 800.0 111670.0 25 0 24634.0 + 26076 NNMYESYEEQ 10 90 653.7469965664344 1305.4794401996687 2 653.7471191287041 MULTI CID FTMS 0 0 0 5467 52007.58203125 0.4370521910382829 -2 0.0313301086425781 1 Unmodified _NNMYESYEEQ_ REV__ENSG00000113141|ENST00000417647|IK;REV__ENST00000515592.1_1_5:140041093-140041799:+|nuORF 12.240655878213236 0.6421556946785427 4 Q{M(Oxidation (M))|F}A 3 -1 41.427 0.0 0.0 3.1733 0.0 0.0 0.0 956.3085753297864 956.3085753297864 12.653631197717983 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 Q{M(Oxidation (M))|F}A 3.1733 - 73 + 1 2.442 66690.3 0.4699999988079071 1439 4027 5467 HBL1_DMSO_200M_050219_2,5468 HBL1_DMSO_200M_050219_2,5468,NNMYESYEEQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5469 28.034 800.0 91292.0 25 0 7343.0 + 43098 VYNPQSKTY 9 113 550.2742439851851 1098.53393503717 2 550.2744628787041 MULTI CID FTMS 0 0 0 5467 99133.890625 0.3799718532225629 9 -0.1439266204833984 2 Unmodified _VYNPQSKTY_ ENSG00000154832|ENST00000285106|CXXC1;ENST00000587170.1_1_18:47808965-47809781:-|nuORF;ENST00000587342.1_1_18:47808965-47809814:-|nuORF;ENST00000590901.5_1_18:47808965-47812340:-|nuORF;nc|ENSG00000154832|Q9P0U4-2|CXXC1 32.78568957990786 0.1150597335874693 4 [YV]N[QP]SKTY 9 0 + 55.613 0.0 0.0 5.0625 5.0625 81.729 0.0 0.0 0.0 41.00887809210043 3.925449767853309 3.925449767853309 9.208187539523747 0 0.805462187404089 2.0 0.4247425010840047 0.0 + + [YV]N[QP]SKTY;[YV]GG[QP]SKTY;[YV]N[QP][WR]H 5.0625;4.2242;3.4754 +;-;- + 146 + 1 2.442 62465.4 0.5 1440 4027 5467 HBL1_DMSO_200M_050219_2,5469 HBL1_DMSO_200M_050219_2,5469,VYNPQSKTY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5472 28.054 800.0 122990.0 25 0 10374.0 + 0 AAAAATPAV 9 89 742.4094263693682 741.4021499027682 1 742.4102661013603 MULTI CID FTMS 0 0 0 5471 118020.21875 0.9275308323230624 4 -0.071420669555664 1 Unmodified _AAAAATPAV_ ENSG00000070756|ENST00000318607|PABPC1;ENSG00000151846|ENST00000281589|PABPC3 81.86404211737425 0.017065112157077 4 [PA]AAAAATV 9 4 + 58.292 0.0 0.0 7.8624 7.8624 84.806 0.0 0.0 0.0 4.488474775526186 14.973024840566469 4.488474775526186 3.633643341304669 0 0.4698565171985375 0.0 0.5 0.0 [PA]AAAAATV;[PA]AAAATAV;{[NV]|[RG]}PAAATV;{[NV]|[RG]}PAATAV;[PA]AAATAAV;{[NV]|[RG]}APAATV;[PA]AATVNV;[PA]AATAAAV;{[NV]|[RG]}PATAAV;{[NV]|[RG]}APATAV 7.8624;7.3723;7.257;6.7669;6.7348;6.3143;6.2231;6.2194;6.1294;5.8242 -;-;-;-;-;-;-;-;-;- 1049 1 2.442 73750.3 0.5699999928474426 1441 4029 5471 HBL1_DMSO_200M_050219_2,5472 HBL1_DMSO_200M_050219_2,5472,AAAAATPAV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5474 28.059 59.0 672920.0 25 0 51432.0 + 34805 SQEGRPVQV 9 74 500.2647376352127 998.5149223372256 2 500.2647888064384 MULTI CID FTMS 0 0 0 5473 814424.9375 0.0741091151875538 16 -0.1623859405517578 1 Unmodified _SQEGRPVQV_ ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 34.93206674587334 0.1032771302489716 4 E{[QS]|[NT]}VN{I|L}{I|L}D 8 8 30.667 0.0 0.0 3.0713 0.0 0.0 0.0 97.04116998843983 97.04116998843983 13.03395642852614 0.0 0.0 0.0 0 1.424742501084005 0.0 0.3054621874040891 0.0 E{[QS]|[NT]}VN{I|L}{I|L}D 3.0713 - 128 + 1 2.442 35903.0 1.0 1442 4030 5473 HBL1_DMSO_200M_050219_2,5474 HBL1_DMSO_200M_050219_2,5474,SQEGRPVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5475 28.061 115.0 508410.0 25 0 60989.0 + 33255 SFPASSGVSH 10 70 488.23034326897925 974.4461336047584 2 488.2303344607353 MULTI CID FTMS 0 0 0 5473 307543.15625 0.4173884126163901 -79 1.3717041015625 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 41.8396318013385 0.1381409678234242 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 61.942 0.0 0.0 6.3566 6.3566 88.496 0.0 0.0 0.0 41.993559221610965 13.464467979859336 13.464467979859336 10.510299956639813 0 0.3807196863200844 2.0 0.75 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YV]EPH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[YV]PDT;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}CAPDT;{[QN]|[E{I|L}]|[KN]}[KQ]SH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 6.3566;5.2781;4.1163;3.526;3.3524;0.31768 +;-;-;-;-;- + 214 + 1 2.442 49793.2 1.0 1443 4030 5473 HBL1_DMSO_200M_050219_2,5475 HBL1_DMSO_200M_050219_2,5475,SFPASSGVSH False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5478 28.081 800.0 119160.0 25 0 53390.0 + 8333 ERQPGKDAAW 10 89 579.2889149269813 0 579.2895995974541 PEAK CID FTMS 0 0 0 5477 125163.78125 0.9133733992412502 -7 0.0927276611328125 1 Unmodified _ERQPGKDAAW_ REV__chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;REV__ENSG00000165025|ENST00000375754|SYK;REV__nc|ENSG00000165025|P43405-2|SYK 13.90604991867851 0.345182617568752 4 {M(Oxidation (M))|F}QR 3 -1 10.573 0.0 0.0 0.91417 0.0 0.0 596.2905851256438 126.01987634830311 722.3104614739469 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6382104921644451 {M(Oxidation (M))|F}QR 0.91417 - 22 + 1 2.442 77935.8 0.5699999928474426 1444 4032 5477 HBL1_DMSO_200M_050219_2,5478 HBL1_DMSO_200M_050219_2,5478,ERQPGKDAAW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5479 28.095 800.0 138890.0 25 0 15516.0 + 44880 YPPHVQKV 8 129 484.2719362634165 0 484.2717468142509 PEAK CID FTMS 0 0 0 5477 89800.3984375 0.8200520178238383 -8 0.1368026733398437 2 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 30.22481116460888 0.2280668331718824 4 PP 2 6 13.271 0.0 0.0 1.3731 0.0 0.0 163.0638462272098 606.3352144830686 769.3990607102785 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + PP 1.3731 + + 75 + 1 2.442 89243.4 0.5299999713897705 1445 4032 5477 HBL1_DMSO_200M_050219_2,5479 HBL1_DMSO_200M_050219_2,5479,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5480 28.109 800.0 74950.0 25 0 4925.7 + -1 AYPNNYETM 9 98 559.7267658131074 1117.4389786930146 2 559.7277709841728 MULTI CID FTMS 0 0 0 5477 88930.59375 1.0 0 0.0 3 Oxidation (M) _AYPNNYETM(Oxidation (M))_ ENSG00000198730|ENST00000361367|CTR9 18.13498045792455 0.3457906370836843 4 T{M(Oxidation (M))|F} 2 -1 20.846 0.0 0.0 1.8655 0.0 0.0 851.3449062826616 0.0 851.3449062826616 0.0 -1.7772822773321408 -1.7772822773321408 0.0 0 0.0 0.0 0.2887254899964357 0.0 T{M(Oxidation (M))|F} 1.8655 + + 87 + 1 2.442 51566.9 0.5299999713897705 1446 4032 5477 HBL1_DMSO_200M_050219_2,5480 HBL1_DMSO_200M_050219_2,5480,AYPNNYETM False False AYPNNYETM 28.108995 559.727770984173 976016.9375 5477.0 ENSG00000198730|ENST00000361367|CTR9 4.910166025161743 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5482 28.114 14.0 2935700.0 25 0 237820.0 + 237 AAVRDISEA 9 65 466.2459102008172 930.4772674684344 2 466.2459594607353 MULTI CID FTMS 0 0 0 5481 4433201.0 1.0 0 0.0 1 Unmodified _AAVRDISEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF 43.77239144664712 0.0547478964384323 4 AA[RV]D{I|L}SEA 9 0 + 67.475 0.0 0.0 7.2516 7.2516 93.543 0.0 0.0 0.0 12.159452731211717 42.97589873476652 12.159452731211717 18.750612633917 0 1.2134679910804405 1.5228787452803376 0.4247425010840047 0.0 + + AA[RV]D{I|L}SEA;AA[RV]{[TV]|[{I|L}S]}DEA;{[CP]|[EA]}S[KP]{I|L}{[WT]|[RM]};AA[RV]{[WT]|[RM]}{NN|[MP]|[D{I|L}]|[EV]} 7.2516;5.2364;2.3273;1.4361 +;-;-;- + 111 1 2.442 39017.2 1.0 1447 4033 5481 HBL1_DMSO_200M_050219_2,5482 HBL1_DMSO_200M_050219_2,5482,AAVRDISEA True True AAVRDISEA 28.113778 466.245959460735 78769122.0 5481.0 ENST00000465478.1_1_8:93156318-93156576:-|nuORF;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;;ENST00000471178.2_1_19:35024355-35024547:-|nuORF 5.411333878835042 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5483 28.118 240.0 269520.0 25 0 39625.0 + -1 NIKQVAEMK 9 78 538.7904983636968 1075.5664437941934 2 538.7922241091728 MULTI CID FTMS 0 0 0 5481 295149.65625 0.9339504762808856 3 -0.0385112762451171 2 Oxidation (M) _NIKQVAEM(Oxidation (M))K_ REV__ENSG00000156535|ENST00000287097|CD109;REV__nc|ENSG00000156535|Q6YHK3-2|CD109;REV__nc|ENSG00000156535|Q6YHK3-3|CD109;REV__nc|ENSG00000156535|Q6YHK3-4|CD109 18.1463463914782 0.3454829746528889 4 KTT 3 -1 35.177 0.0 0.0 3.2706 0.0 0.0 63.99519989347511 678.3578893332924 742.3530892267676 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 1.3494850021680094 0.0 KTT 3.2706 - 135 + 1 2.442 54096.6 1.0 1448 4033 5481 HBL1_DMSO_200M_050219_2,5483 HBL1_DMSO_200M_050219_2,5483,NIKQVAEMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5484 28.132 800.0 156190.0 25 0 18505.0 45212 YQVSPFNHG 9 113 524.7457635734364 1047.4769742136727 2 524.7464477419853 MULTI CID FTMS 0 0 0 5481 153008.53125 0.8203476766656603 -7 0.116546630859375 3 Unmodified _YQVSPFNHG_ ENSG00000159423|ENST00000375341|ALDH4A1;ENST00000494072.3_3_1:19209920-19216616:-|nuORF;nc|ENSG00000159423|P30038-2|ALDH4A1;nc|ENSG00000159423|P30038-3|ALDH4A1 26.88365393820708 0.1891292719743517 4 YYQGGG 6 7 77.013 0.0 0.0 7.3523 0.0 0.0 0.0 419.20545285141367 419.20545285141367 56.36114718206791 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.0 0.8807196863200843 YYQGGG 7.3523 - 543 + 1 2.442 96563.3 0.5899999737739563 1449 4033 5481 HBL1_DMSO_200M_050219_2,5484 HBL1_DMSO_200M_050219_2,5484,YQVSPFNHG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5486 28.137 78.0 1000400.0 25 0 130550.0 + 13060 HAYSVRRL 8 78 334.5265118385255 1000.5577061157765 3 334.5259277224541 MULTI CID FTMS 0 0 0 5485 626460.375 0.567330046339035 5 -0.0272274017333984 1 Unmodified _HAYSVRRL_ ENSG00000213983|ENST00000397120|AP1G2;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF;ENST00000554554.5_1_14:24032570-24032684:-|nuORF;ENST00000554982.5_1_14:24031495-24032684:-|nuORF;ENST00000557132.1_1_14:24032416-24032684:-|nuORF 16.942295170755138 0.6606234159769251 4 HA{I|L} 3 5 46.995 0.0 0.0 4.6969 0.0 0.0 0.0 676.3518068058873 676.3518068058873 26.025684359364405 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 HA{I|L} 4.6969 - 36 + 1 2.442 71919.5 1.0 1450 4034 5485 HBL1_DMSO_200M_050219_2,5486 HBL1_DMSO_200M_050219_2,5486,HAYSVRRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5487 28.14 143.0 270120.0 25 0 28334.0 2598 ASNDYTQQATQ 11 73 634.7730566586033 1267.5315603840063 2 634.7733642458916 MULTI CID FTMS 0 0 0 5485 423219.75 0.6340671196594145 3 -0.0193824768066406 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNDYTQQATQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 40.23920728925047 0.2087110615831976 4 TQ 2 9 32.351 0.0 0.0 2.5523 0.0 0.0 1020.4148134131066 0.0 1020.4148134131066 0.0 -2.333129419207026 -2.333129419207026 0.0 0 0.0 0.0 0.4247425010840047 0.7134679910804405 + TQ 2.5523 + + 391 + 1 2.442 34090.4 1.0 1451 4034 5485 HBL1_DMSO_200M_050219_2,5487 HBL1_DMSO_200M_050219_2,5487,ASNDYTQQATQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5489 28.147 227.0 215920.0 25 0 30807.0 + 35081 SQVEGEHQL 9 77 513.7459582911663 1025.4773636491325 2 513.7463867068291 MULTI CID FTMS 0 0 0 5488 266850.1875 0.0362810153347514 19 -0.1255455017089843 1 Unmodified _SQVEGEHQL_ ENSG00000117724|ENST00000366955|CENPF 31.26834338654808 0.1333407332142048 4 {[QS]|[NT]}VE 4 5 43.456 0.0 0.0 4.2376 0.0 0.0 0.0 579.2542722598317 579.2542722598317 15.0 0.0 0.0 0.0 0 1.0 1.3010299956639813 0.4247425010840047 0.0 + {[QS]|[NT]}VE 4.2376 + + 96 + 1 2.442 41575.3 1.0 1452 4035 5488 HBL1_DMSO_200M_050219_2,5489 HBL1_DMSO_200M_050219_2,5489,SQVEGEHQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5495 28.169 161.0 392650.0 25 0 21995.0 + 28911 QAPPPPQQV 9 105 481.2586875982422 960.5028222632844 2 481.2585632205009 MULTI CID FTMS 0 0 0 5494 363585.25 0.0615736012627503 94 -1.6846866607666016 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 58.6788170122104 0.0268135626297836 4 [QA]PPPPG 7 3 42.041 0.0 0.0 4.377 0.0 0.0 0.0 313.15269954283445 313.15269954283445 27.938746229505902 0.0 0.0 0.0 0 1.2396518287104437 1.3979400086720375 0.0 0.5356668758921829 [QA]PPPPG 4.377 - 592 1 2.442 53970.8 1.0 1453 4040 5494 HBL1_DMSO_200M_050219_2,5495 HBL1_DMSO_200M_050219_2,5495,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5497 28.176 249.0 202770.0 25 0 19911.0 + 4864 DGAPPSNQI 9 88 449.7169891694584 897.4194254057168 2 449.7167541384697 MULTI CID FTMS 0 0 0 5496 181884.5625 0.4622802338411371 -40 0.7985954284667969 1 Unmodified _DGAPPSNQI_ ENSG00000112245|ENST00000626021|PTP4A1 36.12702656103203 0.0967173616627612 4 [DG]AP 4 5 37.945 0.0 0.0 4.2283 0.0 0.0 0.0 554.258328564173 554.258328564173 23.34121882396211 0.0 0.0 0.0 0 0.75 1.3010299956639813 0.2742275032520141 0.0 + [DG]AP 4.2283 + + 130 1 2.442 42690.8 1.0 1454 4041 5496 HBL1_DMSO_200M_050219_2,5497 HBL1_DMSO_200M_050219_2,5497,DGAPPSNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5498 28.181 236.0 198590.0 25 0 25932.0 + 4412 DAVRQSVV 8 86 437.2429128258573 872.4712727185146 2 437.2431518435478 MULTI CID FTMS 0 0 0 5496 150573.515625 0.6451023271923674 8 -0.0593395233154296 2 Unmodified _DAVRQSVV_ ENSG00000089154|ENST00000300648|GCN1 30.63653989081413 0.3996269429323407 4 {[DA]|[EG]}VR{[QS]|[NT]}VV 8 0 + 37.145 0.0 0.0 4.2575 4.2575 69.671 0.0 0.0 0.0 8.31088087956136 23.65024697793565 8.31088087956136 2.602583710382476 0 1.0044321917401078 1.5228787452803376 0.4247425010840047 0.0 + + {[DA]|[EG]}VR{[QS]|[NT]}VV;{[DA]|[EG]}[RK]{[DA]|[EG]}VV 4.2575;3.9592 +;- + 51 1 2.442 44511.0 1.0 1455 4041 5496 HBL1_DMSO_200M_050219_2,5498 HBL1_DMSO_200M_050219_2,5498,DAVRQSVV False False DAVRQSVV 28.180663 437.243151843548 1304981.875 5496.0 ENSG00000089154|ENST00000300648|GCN1 3.8045787811279297 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5503 28.197 37.0 1298200.0 25 0 255310.0 + 3798 DAIENKTTV 9 75 495.7589533787203 989.5033538242408 2 495.7589904665947 MULTI CID FTMS 0 0 0 5502 1531905.0 0.7047185373055334 5 -0.0436592102050781 1 Unmodified _DAIENKTTV_ ENSG00000130119|ENST00000360845|GNL3L 27.628801355627647 0.1796483985696185 4 {[DA]|[EG]}[KG]TTV 7 3 42.809 0.0 0.0 4.3263 0.0 0.0 0.0 314.1387269942316 314.1387269942316 19.6479633912994 0.0 0.0 0.0 0 0.0 2.0 1.610924374808178 0.0 {[DA]|[EG]}[KG]TTV 4.3263 - 449 1 2.442 43340.5 1.0 1456 4045 5502 HBL1_DMSO_200M_050219_2,5503 HBL1_DMSO_200M_050219_2,5503,DAIENKTTV False True DAIENKTTV 28.197358 495.758990466595 25185982.0 5502.0 ENSG00000130119|ENST00000360845|GNL3L 6.334656238555908 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5504 28.203 281.0 297020.0 25 0 18081.0 + 2390 AQPARQIL 8 108 448.76925017175455 895.5239474103091 2 448.7693969607353 MULTI CID FTMS 0 0 0 5502 159278.75 0.4353075585421844 -21 0.2644004821777344 2 Unmodified _AQPARQIL_ ENSG00000114650|ENST00000265565|SCAP;nc|ENSG00000114650|Q12770-2|SCAP;nc|ENSG00000114650|Q12770-3|SCAP;nc|ENSG00000114650|Q12770-4|SCAP 24.67388899826682 0.525179942228231 4 [QA]PAV 5 4 35.898 0.0 0.0 4.0086 0.0 0.0 0.0 426.2478121393188 426.2478121393188 18.22776415716749 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.0 0.0 [QA]PAV 4.0086 - 56 + 1 2.442 68090.4 1.0 1457 4045 5502 HBL1_DMSO_200M_050219_2,5504 HBL1_DMSO_200M_050219_2,5504,AQPARQIL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5505 28.216 800.0 92874.0 25 0 13047.0 + 13966 HYQTYREM 8 84 564.2505605838518 1126.4865682345037 2 564.2500488162041 MULTI CID FTMS 0 0 0 5502 83773.078125 0.4138575525757272 -16 0.1550006866455078 3 Unmodified _HYQTYREM_ ENSG00000085840|ENST00000371568|ORC1 26.268140514670165 0.4916104673212489 4 HYQT 4 4 60.152 0.0 0.0 5.3397 0.0 0.0 0.0 594.2354830377561 594.2354830377561 36.00833760139686 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.3252574989159953 0.4247425010840047 + HYQT 5.3397 + + 171 + 1 2.442 62297.1 0.449999988079071 1458 4045 5502 HBL1_DMSO_200M_050219_2,5505 HBL1_DMSO_200M_050219_2,5505,HYQTYREM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5510 28.236 287.0 211080.0 25 0 7254.7 -1 QNVHEERME 9 111 594.2573588198552 1186.5001647065103 2 594.2576171755791 MULTI CID FTMS 0 0 0 5509 270163.03125 0.6339302638484254 9 -0.0527858734130859 1 Oxidation (M) _QNVHEERM(Oxidation (M))E_ ENSG00000181433|ENST00000370709|SAGE1 20.453626601364224 0.2830276176381075 4 {[QG]|[NA]}G[HS]NQQ 8 -1 55.609 0.0 0.0 4.6868 0.0 0.0 0.0 347.1359428649666 347.1359428649666 22.244237387763093 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.086696871556164 1.5356668758921828 {[QG]|[NA]}G[HS]NQQ 4.6868 - 1544 1 2.451 50607.0 1.0 1459 4049 5509 HBL1_DMSO_200M_050219_2,5510 HBL1_DMSO_200M_050219_2,5510,QNVHEERME False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5514 28.249 135.0 591530.0 25 0 50487.0 201 AAPSVPGAVV 10 89 434.2503355951893 866.4861182571786 2 434.2505065798759 MULTI CID FTMS 0 0 0 5513 519768.75 0.0686627871224566 49 -0.8433341979980469 1 Unmodified _AAPSVPGAVV_ nc|ENSG00000049540|P15502-12|ELN;nc|ENSG00000049540|P15502-5|ELN 21.74664581756881 0.480091245866545 4 AAA 3 7 27.051 0.0 0.0 3.122 0.0 0.0 0.0 650.3513428267677 650.3513428267677 -2.998037644757048 0.0 -2.998037644757048 0.0 0 0.5 1.3979400086720375 0.0 0.0 AAA 3.122 - 162 1 2.451 67587.5 1.0 1460 4052 5513 HBL1_DMSO_200M_050219_2,5514 HBL1_DMSO_200M_050219_2,5514,AAPSVPGAVV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 5515 28.261 688.0 219460.0 25 0 26218.0 + 45145 YQDTHPERL 9 138 386.85627417038233 1157.546993111347 3 386.8560058474541 MULTI CID FTMS 0 0 0 5513 113363.625 0.0987663745923436 -21 0.1829414367675781 2 Unmodified _YQDTHPERL_ ENSG00000144591|ENST00000313597|GMPPA;ENST00000481170.1_1_2:220370207-220370552:+|nuORF;nc|ENSG00000144591|Q96IJ6-2|GMPPA 14.40537977576856 0.4467465336100671 4 VVAM{I|L}HTDQ 9 9 54.72 0.0 0.0 4.7272 0.0 0.0 0.0 160.03911235010767 160.03911235010767 26.717335263081083 0.0 0.0 0.0 0 0.4392404878284264 1.3979400086720375 0.0 0.5 VVAM{I|L}HTDQ 4.7272 - 305 1 2.451 120842.0 1.0 1461 4052 5513 HBL1_DMSO_200M_050219_2,5515 HBL1_DMSO_200M_050219_2,5515,YQDTHPERL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5522 28.298 800.0 111810.0 25 0 10224.0 + -1 MVSFNYGSLMF 11 120 437.8630645141761 1310.5673641427284 3 437.8631774783134 MULTI CID FTMS 0 0 0 5521 49312.27734375 0.5411495415897419 1 -0.016357421875 1 Oxidation (M) _M(Oxidation (M))VSFNYGSLMF_ REV__ENSG00000156453|ENST00000287008|PCDH1;REV__ENST00000511044.1_1_5:141242715-141245657:-|nuORF;REV__nc|ENSG00000156453|Q08174|PCDH1 3.072263186857199 0.860652797555031 4 V 1 -1 14.604 0.0 0.0 1.1143 0.0 0.0 1193.488024093215 0.0 1193.488024093215 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1143 + + 104 + 1 2.451 74342.1 0.4900000095367431 1462 4058 5521 HBL1_DMSO_200M_050219_2,5522 HBL1_DMSO_200M_050219_2,5522,MVSFNYGSLMF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5525 28.318 800.0 63006.0 25 0 2946.3 -1 CECRKCKNAF 10 99 629.7758864997924 1257.5372200663846 2 630.2787353396416 MULTI CID FTMS 0 0 0 5524 80380.4296875 0.0126798771972762 -26 0.1694202423095703 1 Carbamidomethyl (C) _C(Carbamidomethyl (C))ECRKCKNAF_ nc|ENSG00000291239|Q3ZCX4-3|ZNF568 17.11289562659939 0.5604042439455784 4 [AG]AHDEAGAQNA{M(Oxidation (M))|F} 13 -1 + 84.966 0.0 0.0 6.7565 6.7565 81.784 0.0 0.0 0.0 7.08739157449206 16.642078980768076 7.08739157449206 3.631779024128264 0 0.8807196863200843 1.5228787452803376 0.0 0.8807196863200843 [AG]AHDEAGAQNA{M(Oxidation (M))|F};[AG]AHDEAQQNA{M(Oxidation (M))|F};[AG]AHDEQAQNA{M(Oxidation (M))|F};[AG]AHDEAGANQA{M(Oxidation (M))|F};[QA]HDEAGAQNA{M(Oxidation (M))|F};[AG]AHDEAGAQGGA{M(Oxidation (M))|F};[AG]AHDEAQNQA{M(Oxidation (M))|F};[AG]AHDEQANQA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEQAQNA{M(Oxidation (M))|F} 6.7565;6.4677;6.4677;6.2144;6.1929;6.0351;5.9256;5.9256;5.9065;5.9065 -;-;-;-;-;-;-;-;-;- 4339 1 2.451 43516.3 0.4900000095367431 1463 4060 5524 HBL1_DMSO_200M_050219_2,5525 HBL1_DMSO_200M_050219_2,5525,CECRKCKNAF False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 5526 28.32 67.0 1023900.0 25 0 347680.0 -1 0 64 394.18543458655904 393.1781581199591 1 394.1855956912041 MULTI CID FTMS 0 0 0 5524 820834.875 0.4970905119881352 31 -0.4876022338867187 2 4 {M(Oxidation (M))|F} 1 -1 11.783 0.0 0.0 2.9968 0.0 0.0 228.0990393228872 0.0 228.0990393228872 0.0 6.404133047878471 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.9968 - 16 + 1 2.451 60041.0 1.0 1464 4060 5524 HBL1_DMSO_200M_050219_2,5526 HBL1_DMSO_200M_050219_2,5526, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5528 28.325 149.0 540430.0 25 0 53625.0 + 33256 SFPASSGVSH 10 89 488.23034326897925 974.4461336047584 2 488.2309448122978 MULTI CID FTMS 0 0 0 5527 381126.84375 0.5172540018708591 -48 0.6046180725097656 1 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 58.6788170122104 0.0400518768368984 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 72.159 0.0 0.0 7.4051 7.4051 94.269 0.0 0.0 0.0 50.84987015423587 11.378946235899008 11.378946235899008 21.03917193908117 0 0.3494850021680094 2.0 1.4049471895720984 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YV]EPH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASQQ[NP];{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}CAPDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[YV]PDT;[PA]S[SG]VSHAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[VG][DP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD][WQ]H 7.4051;5.246;4.7093;4.6032;4.5291;4.4238;4.1203;3.1749;3.1178;2.7909 +;-;-;-;-;-;-;-;-;- + 416 + 1 2.451 65778.1 1.0 1465 4061 5527 HBL1_DMSO_200M_050219_2,5528 HBL1_DMSO_200M_050219_2,5528,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5529 28.334 483.0 174490.0 25 0 22700.0 + 34806 SQEGRPVQV 9 111 500.2647376352127 998.5149223372256 2 500.2663146853447 MULTI CID FTMS 0 0 0 5527 142237.203125 0.0129429647656707 47 -0.8790760040283203 2 Unmodified _SQEGRPVQV_ ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 41.95555342248728 0.0647214845423414 4 {[QS]|[NT]}E[VG][RP]QV 9 2 + 30.454 0.0 0.0 3.05 3.05 70.91 0.0 0.0 0.0 5.795671638727033 3.689484449251953 3.689484449251953 5.795671638727033 0 1.305462187404089 0.0 0.0 0.6307196863200843 {[QS]|[NT]}E[VG][RP]QV;[AG]SE[VG][RP]QV;EPT{I|L}{I|L}{[CP]|[EA]}N{I|L};EPT{I|L}{I|L}{[CP]|[EA]}QV;[AG]VP[WK]DQV;{[QV]|[N{I|L}]|[RA]|[KV]}P[WK]DQV;[AG]VP[WK]D[AG]V;EPT{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}P[WK]D[AG]V;{[QS]|[NT]}EVN[RV][PA] 3.05;2.4695;2.42;2.4104;1.4858;1.44;0.56361;0.54702;0.51238;0.4443 -;-;-;-;-;-;-;-;-;- 212 1 2.451 69831.4 1.0 1466 4061 5527 HBL1_DMSO_200M_050219_2,5529 HBL1_DMSO_200M_050219_2,5529,SQEGRPVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5530 28.342 467.0 126990.0 25 0 6194.5 + 25063 MPVGPNAHKV 10 102 525.2813310007524 1048.5481090683047 2 525.2829467654228 MULTI CID FTMS 0 0 0 5527 87229.875 0.0742547487184376 -22 0.160165786743164 3 Unmodified _MPVGPNAHKV_ ENSG00000087365|ENST00000322535|SF3B2 29.081581746732265 0.3152867722954398 4 MPVK{NN|[MP]|[D{I|L}]|[EV]}P 7 6 57.994 0.0 0.0 5.5309 0.0 0.0 0.0 265.1120699518188 265.1120699518188 37.44804792093738 0.0 0.0 0.0 0 0.8252574989159953 1.5228787452803376 0.7302046884880937 0.0 MPVK{NN|[MP]|[D{I|L}]|[EV]}P 5.5309 - 213 + 1 2.451 52393.8 1.0 1467 4061 5527 HBL1_DMSO_200M_050219_2,5530 HBL1_DMSO_200M_050219_2,5530,MPVGPNAHKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5531 28.356 800.0 135330.0 25 0 38574.0 + 30569 REQYEPHKA 9 103 579.2889149269813 0 579.2889892458916 PEAK CID FTMS 0 0 0 5527 81447.046875 0.5943537764634303 22 -0.3290042877197265 4 Unmodified _REQYEPHKA_ REV__ENSG00000186115|ENST00000221700|CYP4F2;REV__ENSG00000186529|ENST00000221307|CYP4F3;REV__ENST00000392846.7_1_19:15989583-16003262:-|nuORF;REV__ENST00000592279.6_1_19:15757939-15770192:+|nuORF;REV__nc|ENSG00000186529|Q08477-2|CYP4F3 6.723162845929126 0.3444685223463734 4 DTHK 4 -1 19.285 0.0 0.0 1.6674 0.0 0.0 290.1400612820267 382.18329797916255 672.3233592611892 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 DTHK 1.6674 - 23 + 1 2.451 85211.0 0.4399999976158142 1468 4061 5527 HBL1_DMSO_200M_050219_2,5531 HBL1_DMSO_200M_050219_2,5531,REQYEPHKA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5534 28.371 480.0 284200.0 25 0 23198.0 + 25066 MPVGPNAHKV 10 144 350.52364336165704 1048.5491006851712 3 350.5233337283134 MULTI CID FTMS 0 0 0 5533 207081.203125 0.1294281079491525 -18 0.1670589447021484 1 Unmodified _MPVGPNAHKV_ ENSG00000087365|ENST00000322535|SF3B2 39.94969957227396 0.1580982266129622 4 MPVGPNAHKV 10 0 + 62.406 0.0 0.0 5.9517 5.9517 84.62 0.0 0.0 0.0 24.283895199066563 4.570393040393917 4.570393040393917 9.164539485499247 0 0.4559771852360796 0.958607314841775 0.0 0.9489700043360187 + + MPVGPNAHKV;MPVGPGGAHKV;MVPGPNAHKV;MPR{[TV]|[{I|L}S]}[W{I|L}]{M(Oxidation (M))|F};MVPGPGGAHKV;MPRPN[QP][{I|L}P];MPR[{I|L}T]{[RE]|[WV]}{M(Oxidation (M))|F};MPRPGG[QP][{I|L}P];MV[{I|L}T]R[WP]{M(Oxidation (M))|F};MPRP[HV][DV]V 5.9517;5.0777;4.5539;3.6954;3.6799;3.5711;3.3159;2.6929;2.5414;2.3612 +;-;-;-;-;-;-;-;-;- + 913 + 1 2.451 121269.8 1.0 1469 4063 5533 HBL1_DMSO_200M_050219_2,5534 HBL1_DMSO_200M_050219_2,5534,MPVGPNAHKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5536 28.375 107.0 405020.0 25 0 27319.0 + 238 AAVRDISEA 9 73 466.2459102008172 930.4772674684344 2 466.2459899783134 MULTI CID FTMS 0 0 0 5535 402513.78125 0.0907952924421879 31 -0.5577545166015625 1 Unmodified _AAVRDISEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF 26.268140514670165 0.1969607489560049 4 {I|L}SEA 4 5 33.66 0.0 0.0 3.6175 0.0 0.0 512.2707221741285 0.0 512.2707221741285 0.0 22.23989209757564 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.0 + {I|L}SEA 3.6175 + + 44 1 2.451 38718.3 1.0 1470 4064 5535 HBL1_DMSO_200M_050219_2,5536 HBL1_DMSO_200M_050219_2,5536,AAVRDISEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5537 28.382 369.0 282570.0 25 0 33606.0 + -1 IVQADQKMK 9 111 538.7904983636968 1075.5664437941934 2 538.7923461794853 MULTI CID FTMS 0 0 0 5535 223765.203125 0.7080666150485576 34 -0.6337108612060547 2 Oxidation (M) _IVQADQKM(Oxidation (M))K_ REV__ENSG00000188158|ENST00000676302|NHS;REV__nc|ENSG00000188158|Q6T4R5-2|NHS;REV__nc|ENSG00000188158|Q6T4R5-3|NHS;REV__nc|ENSG00000188158|Q6T4R5-4|NHS 22.736283301280096 0.2418982879461534 4 [KT]T[HT]{I|L}T{M(Oxidation (M))|F}K 9 -1 + 56.15 0.0 0.0 5.2205 5.2205 79.364 0.0 0.0 0.0 0.7378621416091846 37.47810928665125 0.7378621416091846 6.641682614712124 0 1.924742501084005 0.0 0.7059771852360797 0.0 [KT]T[HT]{I|L}T{M(Oxidation (M))|F}K;[W{I|L}][TA]P{I|L}T{M(Oxidation (M))|F}K;{[QN]|[E{I|L}]|[KN]}[QT]P{I|L}T{M(Oxidation (M))|F}K;{[QN]|[E{I|L}]|[KN]}G[TA]P{I|L}T{M(Oxidation (M))|F}K;[KG]N[TA]P{I|L}T{M(Oxidation (M))|F}K;[VS]{[RE]|[WV]}P{I|L}T{M(Oxidation (M))|F}K;[KG]G[QT]P{I|L}T{M(Oxidation (M))|F}K;[KG]GG[TA]P{I|L}T{M(Oxidation (M))|F}K;[{I|L}P]T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}T{M(Oxidation (M))|F}K;[TP]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}T{M(Oxidation (M))|F}K 5.2205;4.603;4.3968;4.2806;4.2806;4.207;4.0743;3.9622;3.4016;3.3177 -;-;-;-;-;-;-;-;-;- 1512 1 2.451 84058.5 1.0 1471 4064 5535 HBL1_DMSO_200M_050219_2,5537 HBL1_DMSO_200M_050219_2,5537,IVQADQKMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5541 28.406 800.0 144590.0 25 0 37638.0 + 6360 DVRQTPQV 8 123 471.7537716727671 941.4929904123342 2 471.7533447146416 MULTI CID FTMS 0 0 0 5540 87838.2421875 0.18094917365547 -21 0.1735782623291015 1 Unmodified _DVRQTPQV_ ENSG00000166483|ENST00000450114|WEE1;ENST00000524549.1_1_11:9597437-9598815:+|nuORF;nc|ENSG00000166483|P30291-2|WEE1 58.6788170122104 0.1149141431586871 4 {[QD]|[EN]|[WG]|[KD]|[RS]}VQEPQV 8 3 + 57.828 0.0 0.0 6.1421 6.1421 80.203 0.0 0.0 0.0 3.7751372576825295 30.695217787905666 3.7751372576825295 4.189615513722202 0 0.7984550065040281 0.0 1.5994850021680094 1.0994850021680094 {[QD]|[EN]|[WG]|[KD]|[RS]}VQEPQV;{[QD]|[EN]|[WG]|[KD]|[RS]}VEQPQV;[DV]RQTPQV;{[QD]|[EN]|[WG]|[KD]|[RS]}V[AG]EPQV;{[QD]|[EN]|[WG]|[KD]|[RS]}VE[AG]PQV;[QP][{M(Oxidation (M))|F}V]QPQV;[DV]R[AG]TPQV;[VP]A{[CT]|[{M(Oxidation (M))|F}G]}QPQV;[VP]G{[MS]|[{M(Oxidation (M))|F}A]}QPQV;[QP]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PQV 6.1421;5.6971;5.2099;5.1583;4.7133;4.2922;4.2262;4.107;4.0668;3.7849 -;-;+;-;-;-;-;-;-;- + 933 1 2.449 94735.9 0.6000000238418579 1472 4067 5540 HBL1_DMSO_200M_050219_2,5541 HBL1_DMSO_200M_050219_2,5541,DVRQTPQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5542 28.42 800.0 128180.0 25 0 11657.0 + 44881 YPPHVQKV 8 129 484.2719362634165 0 484.2727844119072 PEAK CID FTMS 0 0 0 5540 89996.1328125 0.8218394527569689 27 -0.5163154602050781 2 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 36.04419817259434 0.1760516939127867 4 PP 2 6 13.271 0.0 0.0 1.3731 0.0 0.0 163.06415075797037 606.3385714166624 769.4027221746328 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + PP 1.3731 + + 144 + 1 2.449 83756.4 0.5899999737739563 1473 4067 5540 HBL1_DMSO_200M_050219_2,5542 HBL1_DMSO_200M_050219_2,5542,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5543 28.434 800.0 250050.0 25 0 28095.0 + 21140 IPAPQSRNV 9 157 491.2773514525076 980.5401499718153 2 491.2788268923759 MULTI CID FTMS 0 0 0 5540 98645.734375 0.0776809171508809 -17 0.153696060180664 3 Unmodified _LPAQPAWKA_ ENSG00000189266|ENST00000334351|PNRC2 28.486842064014134 0.1687311288560894 4 {I|L}PAPQKAWA 9 3 + 58.263 0.0 0.0 5.9419 5.9419 76.76 0.0 0.0 0.0 35.040836673514704 1.5409463031698394 1.5409463031698394 2.762064119389485 0 0.9247425010840048 1.3010299956639813 0.0 0.0 {I|L}PAPQKAWA;{I|L}PAPQKWAA;{I|L}PAP[AG]KAWA;{I|L}PAP[AG]KWAA;[{I|L}P][YV]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KK 5.9419;5.6602;5.0028;4.7211;0.47033 -;-;-;-;- 353 + 1 2.449 153113.8 0.5899999737739563 1474 4067 5540 HBL1_DMSO_200M_050219_2,5543 HBL1_DMSO_200M_050219_2,5543,LPAQPAWKA False False IPAPQSRNV 28.43393 491.278826892376 18043474.0 5540.0 ENSG00000189266|ENST00000334351|PNRC2 4.072131951649983 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5545 28.44 201.0 280080.0 25 0 13476.0 + 28912 QAPPPPQQV 9 103 481.2586875982422 960.5028222632844 2 481.2588073611259 MULTI CID FTMS 0 0 0 5544 276059.5625 0.0467510203621965 122 -2.9715232849121094 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 54.773552608820026 0.0299037012502309 4 [QA]PPPPG 7 3 38.325 0.0 0.0 3.9901 0.0 0.0 0.0 313.15074641783445 313.15074641783445 26.542448911099523 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.841129063296272 [QA]PPPPG 3.9901 - 363 1 2.449 47965.2 1.0 1475 4068 5544 HBL1_DMSO_200M_050219_2,5545 HBL1_DMSO_200M_050219_2,5545,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5546 28.444 191.0 199810.0 25 0 11791.0 -1 LSTLGCEYV 9 80 513.746516404803 1025.4784798764058 2 513.7488891482353 MULTI CID FTMS 0 0 0 5544 217734.3125 0.6649210277816349 -14 0.1683864593505859 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSTLGCEYV_ ENST00000471186.5_1_2:118867154-118867205:+|nuORF 12.531546534597751 0.4974689918368763 4 {I|L}PM 3 -1 35.662 0.0 0.0 3.4776 0.0 0.0 0.0 681.2929171197874 681.2929171197874 19.648867983026506 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {I|L}PM 3.4776 - 67 + 1 2.449 35351.4 1.0 1476 4068 5544 HBL1_DMSO_200M_050219_2,5546 HBL1_DMSO_200M_050219_2,5546,LSTLGCEYV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5549 28.455 269.0 303810.0 25 0 30926.0 + 4865 DGAPPSNQI 9 124 449.7169891694584 897.4194254057168 2 449.7170898318291 MULTI CID FTMS 0 0 0 5548 310696.4375 0.789670216135623 -11 0.1498336791992187 1 Unmodified _DGAPPSNQI_ ENSG00000112245|ENST00000626021|PTP4A1 43.85829265575387 0.0542763391141878 4 [DG]AP 4 5 39.398 0.0 0.0 4.3901 0.0 0.0 0.0 554.2574435544074 554.2574435544074 20.79689690656103 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.2302046884880938 0.0 + [DG]AP 4.3901 + + 419 1 2.449 66416.3 1.0 1477 4070 5548 HBL1_DMSO_200M_050219_2,5549 HBL1_DMSO_200M_050219_2,5549,DGAPPSNQI True True DGAPPSNQI 28.454892 449.717089831829 173239500.0 5548.0 ENSG00000112245|ENST00000626021|PTP4A1 5.451684951782227 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5550 28.458 143.0 434030.0 25 0 28581.0 + 2391 AQPARQIL 8 87 448.76925017175455 895.5239474103091 2 448.7693054080009 MULTI CID FTMS 0 0 0 5548 341560.09375 0.9334810230853277 4 -0.0497817993164062 2 Unmodified _AQPARQIL_ ENSG00000114650|ENST00000265565|SCAP;nc|ENSG00000114650|Q12770-2|SCAP;nc|ENSG00000114650|Q12770-3|SCAP;nc|ENSG00000114650|Q12770-4|SCAP 24.67388899826682 0.525179942228231 4 [QA]PAV 5 4 37.949 0.0 0.0 4.2376 0.0 0.0 0.0 426.2454622858032 426.2454622858032 17.843385278426837 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 [QA]PAV 4.2376 - 54 + 1 2.449 52921.4 1.0 1478 4070 5548 HBL1_DMSO_200M_050219_2,5550 HBL1_DMSO_200M_050219_2,5550,AQPARQIL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5552 28.471 607.0 146140.0 25 0 20168.0 + 13967 HYQTYREM 8 100 564.2505605838518 1126.4865682345037 2 564.2498046755791 MULTI CID FTMS 0 0 0 5551 126207.0703125 0.6234908685024992 10 -0.1364002227783203 1 Unmodified _HYQTYREM_ ENSG00000085840|ENST00000371568|ORC1 33.4449034751529 0.3439576156054211 4 HYQTY{[WT]|[RM]}E 8 2 + 65.099 0.0 0.0 5.779 5.779 85.506 0.0 0.0 0.0 43.672689095741816 0.0056358505421911 0.0056358505421911 9.262137858390808 0 0.6861818737241735 2.0 0.3807196863200844 0.75 HYQTY{[WT]|[RM]}E;HY[AG]TY{[WT]|[RM]}E 5.779;4.9568 -;- 56 + 1 2.449 70362.4 1.0 1479 4071 5551 HBL1_DMSO_200M_050219_2,5552 HBL1_DMSO_200M_050219_2,5552,HYQTYREM False True HYQTYREM 28.470767 564.249804675579 2918034.5 5551.0 ENSG00000085840|ENST00000371568|ORC1 3.3466171423594155 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5555 28.484 369.0 218430.0 25 0 37115.0 + 3858 DAKLDKSQI 9 84 509.2823896768746 1016.5502264205492 2 509.2808105349541 MULTI CID FTMS 0 0 0 5554 143779.921875 0.0540597610623436 -12 0.1548500061035156 1 Unmodified _DAKLDKSQI_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000425843.1_1_X:120337800-120338163:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 67.08073823543168 0.0222274355215578 4 DAK{I|L}DKSQ{I|L} 9 0 + 74.69 0.0 0.0 7.3474 7.3474 92.419 0.0 0.0 0.0 62.90753691172084 6.819206805795588 6.819206805795588 12.262809413564646 0 1.4634679910804405 1.6989700043360187 0.3494850021680094 0.3054621874040891 + + DAK{I|L}DKSQ{I|L};DAK{I|L}DKS[AG]{I|L};{I|L}[NS]{I|L}DKSQ{I|L};{I|L}[NS]{I|L}DKS[AG]{I|L} 7.3474;6.1411;3.5476;2.3412 +;-;-;- + 273 + 1 2.449 66301.0 1.0 1480 4073 5554 HBL1_DMSO_200M_050219_2,5555 HBL1_DMSO_200M_050219_2,5555,DAKLDKSQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5556 28.497 800.0 128830.0 25 0 12043.0 + 43265 WFDLLTTSL 9 121 548.2878657261195 1094.561178519039 2 548.2884399294853 MULTI CID FTMS 0 0 0 5554 130017.5 0.7623963436288187 -7 0.0883941650390625 2 Unmodified _WFDLLTTSL_ REV__ENSG00000134242|ENST00000359785|PTPN22;REV__ENST00000484147.5_1_1:114375712-114414257:-|nuORF;REV__nc|ENSG00000134242|Q9Y2R2-2|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2-3|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2-4|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2-5|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2-6|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2|PTPN22 20.453626601364224 0.2830276176381075 4 DA{M(Oxidation (M))|F}K 4 -1 54.029 0.0 0.0 4.9361 0.0 0.0 0.0 630.3094811744332 630.3094811744332 26.76394045263101 0.0 0.0 0.0 0 0.6861818737241735 1.5228787452803376 0.0 0.0 DA{M(Oxidation (M))|F}K 4.9361 - 234 + 1 2.449 84222.9 0.6800000071525574 1481 4073 5554 HBL1_DMSO_200M_050219_2,5556 HBL1_DMSO_200M_050219_2,5556,WFDLLTTSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5559 28.506 33.0 1222500.0 25 0 384100.0 + 28552 PTQRSAPL 8 55 435.2455921735673 868.4766314139346 2 435.2457153201103 MULTI CID FTMS 0 0 0 5558 1524713.25 0.4756048745722748 -6 0.0574531555175781 1 Unmodified _PTQRSAPL_ REV__ENST00000466047.5_1_10:121609046-121633060:-|nuORF 21.74664581756881 0.5868176546531598 4 PT 2 -1 45.217 0.0 0.0 5.2064 0.0 0.0 0.0 667.3537359314621 667.3537359314621 32.11758134947864 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 PT 5.2064 + + 11 + 1 2.449 40362.0 1.0 1482 4075 5558 HBL1_DMSO_200M_050219_2,5559 HBL1_DMSO_200M_050219_2,5559,PTQRSAPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5560 28.507 45.0 1343000.0 25 0 242380.0 + 45146 YQDTHPERL 9 74 386.85627417038233 1157.546993111347 3 386.8561889529228 MULTI CID FTMS 0 0 0 5558 1001715.375 0.872729642882891 2 -0.0097885131835937 2 Unmodified _YQDTHPERL_ ENSG00000144591|ENST00000313597|GMPPA;ENST00000481170.1_1_2:220370207-220370552:+|nuORF;nc|ENSG00000144591|Q96IJ6-2|GMPPA 7.101721422024254 0.6667666702315642 4 [YQ]DTH{I|L}[EP]R 9 2 + 28.874 0.0 0.0 2.4944 2.4944 66.045 0.0 0.0 0.0 16.884249941294062 1.9627248839266576 1.9627248839266576 3.0102999566398125 0 0.0 0.0 0.0 0.0 [YQ]DTH{I|L}[EP]R;[YQ]DTHP{[QN]|[E{I|L}]|[KN]}R 2.4944;2.2343 -;- 47 + 1 2.449 54174.9 1.0 1483 4075 5558 HBL1_DMSO_200M_050219_2,5560 HBL1_DMSO_200M_050219_2,5560,YQDTHPERL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5563 28.527 800.0 119030.0 25 0 12601.0 -1 FADTWMMFSE 10 86 648.7499536681037 1295.4853544030072 2 648.7496215701103 MULTI CID FTMS 0 0 0 5562 105505.71875 0.4315948668817408 -5 0.0402297973632812 1 2 Oxidation (M) _FADTWM(Oxidation (M))M(Oxidation (M))FSE_ ENSG00000162733|ENST00000367921|DDR2 9.38312468134398 0.6832340498775793 4 [QA]HDE[MD][HN]AE 11 -1 + 51.475 0.0 0.0 3.9734 3.9734 69.52 0.0 0.0 0.0 9.22940438949592 36.78266993123256 9.22940438949592 3.0102999566398125 0 1.8807196863200843 0.0 0.7742275032520141 0.4247425010840047 [QA]HDE[MD][HN]AE;[QA]HDE[EC][HQ]AE;[QA]HDE[RD][C(Carbamidomethyl (C))H]E;[QA]HDE[EC]{M(Oxidation (M))|F}[NG]{M(Oxidation (M))|F};[QA]HDE[C(Carbamidomethyl (C))S][MT]A{M(Oxidation (M))|F};[QA]HDE[C(Carbamidomethyl (C))S]DH[TP];[QA]HD[MT]{[WT]|[RM]}C(Carbamidomethyl (C)){M(Oxidation (M))|F};[HD][QA]E[C(Carbamidomethyl (C))S]DH[TP];{M(Oxidation (M))|F}AD[WK][YC(Carbamidomethyl (C))]C(Carbamidomethyl (C)){M(Oxidation (M))|F};{M(Oxidation (M))|F}W[WK][YC(Carbamidomethyl (C))]C(Carbamidomethyl (C)){M(Oxidation (M))|F} 3.9734;3.7411;3.2956;3.2872;3.2433;3.0054;2.1149;1.151;1.0649;0.43193 -;-;-;-;-;-;-;-;-;- 218 1 2.449 74755.1 0.550000011920929 1484 4077 5562 HBL1_DMSO_200M_050219_2,5563 HBL1_DMSO_200M_050219_2,5563,FADTWMMFSE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5566 28.547 800.0 210550.0 25 0 16271.0 + 41628 VPPPPLLQG 9 131 459.2765245997975 916.538496266395 2 459.2765075564384 MULTI CID FTMS 0 0 0 5565 94486.078125 0.5839491147782622 -4 0.0299720764160156 1 Unmodified _VPPPPLLQG_ REV__ENSG00000112139|ENST00000434837|MDGA1;REV__nc|ENSG00000112139|Q8NFP4-2|MDGA1 20.453626601364224 0.2830276176381075 4 VPPPP 5 -1 58.606 0.0 0.0 6.3943 0.0 0.0 0.0 426.2359102838501 426.2359102838501 47.63721521439797 0.0 0.0 0.0 0 0.5418727718234408 2.0 0.0 0.0 VPPPP 6.3943 + + 100 + 1 2.449 132525.8 0.6600000262260437 1485 4079 5565 HBL1_DMSO_200M_050219_2,5566 HBL1_DMSO_200M_050219_2,5566,VPPPPLLQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5567 28.561 800.0 71806.0 25 0 4793.7 -1 AQAQQTPETCM 11 90 640.7665928996332 1279.5186328660664 2 640.7671996951103 MULTI CID FTMS 0 0 0 5565 88611.0078125 0.5317193185042226 -5 0.0339031219482421 2 Carbamidomethyl (C),Oxidation (M) _AQAQQTPETC(Carbamidomethyl (C))M(Oxidation (M))_ ENSG00000276231|ENST00000619866|PIK3R6 8.745405648335112 0.8338865417133445 4 [QA]HD[{M(Oxidation (M))|F}T]EDH 9 -1 44.231 0.0 0.0 3.4568 0.0 0.0 0.0 196.070703440534 196.070703440534 32.240918700215886 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 1.2302046884880935 [QA]HD[{M(Oxidation (M))|F}T]EDH 3.4568 - 251 1 2.449 45240.7 0.550000011920929 1486 4079 5565 HBL1_DMSO_200M_050219_2,5567 HBL1_DMSO_200M_050219_2,5567,AQAQQTPETCM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5568 28.569 463.0 174380.0 25 0 19556.0 + 17624 KPTAAFHLL 9 95 499.2934568128513 996.5723606925028 2 499.2939330935478 MULTI CID FTMS 0 0 0 5565 88405.4453125 0.0365074383711665 73 -1.7567596435546875 3 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 4 KPT 3 -1 39.253 0.0 0.0 3.9388 0.0 0.0 0.0 667.352994544527 667.352994544527 23.767959391884546 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 KPT 3.9388 + + 124 + 1 2.449 67040.6 1.0 1487 4079 5565 HBL1_DMSO_200M_050219_2,5568 HBL1_DMSO_200M_050219_2,5568,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5570 28.574 11.0 3745600.0 25 0 157920.0 + -1 CLCFAPCIAF 10 77 629.7758864997924 1257.5372200663846 2 629.7764160037041 MULTI CID FTMS 0 0 0 5569 5478535.5 0.5735929004557618 -6 0.0721664428710937 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 18.13498045792455 0.5432546531930572 4 [QA]HDAEQQNA{M(Oxidation (M))|F} 11 -1 + 76.111 0.0 0.0 6.0524 6.0524 56.917 0.0 0.0 0.0 6.36408430030032 40.8897031274296 6.36408430030032 0.0 0 1.0 0.0 0.0 1.0941876774005248 [QA]HDAEQQNA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEAQNQA{M(Oxidation (M))|F};[QA]HDAEQNQA{M(Oxidation (M))|F};[QA]HDEAQ[AG]NA{M(Oxidation (M))|F};[QA]HDAEQ[AG]NA{M(Oxidation (M))|F};[QA]HDAEQQGGA{M(Oxidation (M))|F};[QA]HDEA[AG]QNA{M(Oxidation (M))|F};[QA]HDEAQQGGA{M(Oxidation (M))|F};[QA]HDAE[AG]QNA{M(Oxidation (M))|F} 6.0524;6.0524;5.5103;5.5103;5.3265;5.3265;5.3265;5.3265;5.3265;5.3265 -;-;-;-;-;-;-;-;-;- 1110 1 2.449 37355.6 1.0 1488 4080 5569 HBL1_DMSO_200M_050219_2,5570 HBL1_DMSO_200M_050219_2,5570,CLCFAPCIAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5571 28.58 325.0 201760.0 25 0 24414.0 + 36385 SYQGRASSL 9 93 484.7436015185727 0 484.7437011599541 PEAK CID FTMS 0 0 0 5569 143837.515625 0.106423546338862 -13 0.1794090270996093 2 Unmodified _SYQGRASSL_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 25.399314129420983 0.152124705672316 4 Q 1 8 13.737 0.0 0.0 1.4199 0.0 0.0 250.0968764866704 586.2952756233494 836.3921521100199 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.3494850021680094 + Q 1.4199 + + 81 + 1 2.449 56086.3 1.0 1489 4080 5569 HBL1_DMSO_200M_050219_2,5571 HBL1_DMSO_200M_050219_2,5571,SYQGRASSL False True SYQGRASSL 28.58035 484.743701159954 18598258.0 5569.0 nc|ENSG00000130305|Q96P11-5|NSUN5;;nc|ENSG00000130305|Q96P11-3|NSUN5;;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;;ENSG00000130305|ENST00000438747|NSUN5;;nc|ENSG00000130305|Q96P11|NSUN5;;nc|ENSG00000130305|Q96P11-4|NSUN5 5.855019728342692 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5572 28.594 800.0 45025.0 25 0 9872.8 -1 0 33 1166.4781026715789 3496.412478614936 3 1167.148730456829 MULTI CID FTMS 0 0 0 5569 100930.9296875 0.7057500081669114 -1 0.0382633209228515 3 4 {M(Oxidation (M))|F}Y 2 -1 7.9588 0.0 0.0 0.22763 0.0 0.0 1310.446122269036 1872.8191622369752 3183.265284506011 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.22763 - 7 + 1 2.449 37022.1 0.3700000047683716 1490 4080 5569 HBL1_DMSO_200M_050219_2,5572 HBL1_DMSO_200M_050219_2,5572, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5574 28.599 53.0 931140.0 25 0 66054.0 + 25064 MPVGPNAHKV 10 75 525.2813310007524 1048.5481090683047 2 525.2820312380791 MULTI CID FTMS 0 0 0 5573 1096632.5 0.9335124087243284 -2 0.0629329681396484 1 Unmodified _MPVGPNAHKV_ ENSG00000087365|ENST00000322535|SF3B2 43.85829265575387 0.1168243637355526 4 MPVG 4 6 58.532 0.0 0.0 5.5822 0.0 0.0 0.0 661.3457776925084 661.3457776925084 32.81865655543953 0.0 0.0 0.0 0 1.2614393726401687 1.6989700043360187 0.0 0.0 + MPVG 5.5822 + + 73 + 1 2.449 46558.1 1.0 1491 4081 5573 HBL1_DMSO_200M_050219_2,5574 HBL1_DMSO_200M_050219_2,5574,MPVGPNAHKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5575 28.601 104.0 630430.0 25 0 69721.0 + 33257 SFPASSGVSH 10 73 488.23034326897925 974.4461336047584 2 488.2306701540947 MULTI CID FTMS 0 0 0 5573 535371.5625 0.7265903405445442 -28 0.332681655883789 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 49.93300154707207 0.0805441195901191 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 70.3 0.0 0.0 7.2144 7.2144 93.462 0.0 0.0 0.0 23.265814372234946 14.146518864155126 14.146518864155126 18.86861734192769 0 0.3807196863200844 2.0 1.0629529932484498 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;[PA]SGSVSH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}CAPDT;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[NP][WK]H 7.2144;5.2781;4.4252;3.7799;3.7336;0.07217 +;-;-;-;-;- + 211 + 1 2.449 57791.4 1.0 1492 4081 5573 HBL1_DMSO_200M_050219_2,5575 HBL1_DMSO_200M_050219_2,5575,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5576 28.605 224.0 511240.0 25 0 55242.0 + 44875 YPPHVQKV 8 121 323.1838573595554 966.5297426788665 3 323.1833679080009 MULTI CID FTMS 0 0 0 5573 323420.75 0.8438067127607386 145 -3.965538024902344 3 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 15.847184025352805 0.6768015514314958 4 YPPVHQKV 8 2 + 50.496 0.0 0.0 5.2244 5.2244 72.891 0.0 0.0 0.0 34.84496273132271 6.920179638816997 6.920179638816997 2.218487496163561 0 0.0 0.958607314841775 0.0 0.0 YPPVHQKV;YPPHVQKV;YPVPHQKV;YPPVH[AG]KV;YPPHV[AG]KV;YPVPH[AG]KV;YVPPHQKV;YPPH[KP][KT];YVPPH[AG]KV;YPV[R{M(Oxidation (M))|F}]G[KT] 5.2244;4.9949;4.7308;4.2662;4.0366;3.7725;3.4275;2.6588;2.4693;2.1334 -;+;-;-;-;-;-;-;-;- + 219 + 1 2.449 96799.0 1.0 1493 4081 5573 HBL1_DMSO_200M_050219_2,5576 HBL1_DMSO_200M_050219_2,5576,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5577 28.619 800.0 123890.0 25 0 12278.0 + 45147 YQDTHPERL 9 105 579.7817306046693 1157.5489082761385 2 579.7803832888603 MULTI CID FTMS 0 0 0 5573 148695.4375 0.6481916479692612 3 -0.0845527648925781 4 Unmodified _YQDTHPERL_ ENSG00000144591|ENST00000313597|GMPPA;ENST00000481170.1_1_2:220370207-220370552:+|nuORF;nc|ENSG00000144591|Q96IJ6-2|GMPPA 79.42699986076722 0.0176555798755335 4 YQDTH{I|L}[EP]R 9 2 + 70.55 0.0 0.0 6.0948 6.0948 77.132 0.0 0.0 0.0 52.05042965912175 9.84420447484095 9.84420447484095 2.570071809000609 0 1.6549471895720984 0.0 0.6549471895720984 1.2614393726401687 YQDTH{I|L}[EP]R;YQDTH[EP]{I|L}R;YQ{I|L}CH{I|L}[EP]R;Y[AG]DTH{I|L}[EP]R;YQ{I|L}CH[EP]{I|L}R;Y[AG]DTH[EP]{I|L}R;Y[AG]{I|L}CH{I|L}[EP]R;Y[AG]{I|L}CH[EP]{I|L}R;[YQ]DTH[EP]R{I|L};{I|L}[YQ]CH{I|L}[EP]R 6.0948;5.8728;5.4028;5.2993;5.1808;5.0773;4.6073;4.3853;4.0748;3.481 -;-;-;-;-;-;-;-;+;- + 286 + 1 2.449 79893.4 0.6100000143051147 1494 4081 5573 HBL1_DMSO_200M_050219_2,5577 HBL1_DMSO_200M_050219_2,5577,YQDTHPERL True True YQDTHPERL 28.619046 579.78038328886 18769605.25 5573.0 ENSG00000144591|ENST00000313597|GMPPA;;ENST00000481170.1_1_2:220370207-220370552:+|nuORF;;nc|ENSG00000144591|Q96IJ6-2|GMPPA 6.5118997891743975 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5578 28.624 262.0 289650.0 25 0 40126.0 -1 0 82 394.18543458655904 393.1781581199591 1 394.1836425662041 MULTI CID FTMS 0 0 0 5573 135907.390625 0.0823043421355028 52 -1.2233390808105469 5 4 {M(Oxidation (M))|F} 1 -1 13.979 0.0 0.0 3.5555 0.0 0.0 228.13192201331685 0.0 228.13192201331685 0.0 4.710040265111566 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 3.5555 - 29 + 1 2.449 66213.3 1.0 1495 4081 5573 HBL1_DMSO_200M_050219_2,5578 HBL1_DMSO_200M_050219_2,5578, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5580 28.629 38.0 1422500.0 25 0 187950.0 + 25067 MPVGPNAHKV 10 88 350.52364336165704 1048.5491006851712 3 350.5234252810478 MULTI CID FTMS 0 0 0 5579 1517693.0 0.9485753920364332 1 -0.0248031616210937 1 Unmodified _MPVGPNAHKV_ ENSG00000087365|ENST00000322535|SF3B2 56.17704186161178 0.0466144807663799 4 MPVGPNAH{[QV]|[N{I|L}]|[RA]|[KV]} 10 0 + 76.82 0.0 0.0 7.3263 7.3263 89.635 0.0 0.0 0.0 42.20597698763902 8.264837301042718 8.264837301042718 9.164539485499262 0 0.5941876774005248 1.0 0.0 0.5752574989159953 + + MPVGPNAH{[QV]|[N{I|L}]|[RA]|[KV]};MPVGPGGAH{[QV]|[N{I|L}]|[RA]|[KV]};MPV[RH]{[CP]|[EA]}[{I|L}P] 7.3263;6.4523;2.5807 +;-;- + 333 + 1 2.449 56451.4 1.0 1496 4082 5579 HBL1_DMSO_200M_050219_2,5580 HBL1_DMSO_200M_050219_2,5580,MPVGPNAHKV True True MPVGPNAHKV 28.628512 350.523425281048 65617938.0 5579.0 ENSG00000087365|ENST00000322535|SF3B2 7.634463628133138 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5581 28.64 655.0 125350.0 25 0 23430.0 + 34798 SQEAAIQPR 9 110 500.2647376352127 998.5149223372256 2 500.2657958865166 MULTI CID FTMS 0 0 0 5579 65219.328125 0.0059346742442675 68 -1.6090850830078125 2 Unmodified _SQEAAIQPR_ REV__ENSG00000137501|ENST00000359152|SYTL2;REV__ENST00000438197.2_1_11:85444955-85468786:-|nuORF;REV__nc|ENSG00000137501|Q9HCH5-13|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-14|SYTL2;REV__nc|ENSG00000137501|Q9HCH5-6|SYTL2;REV__nc|ENSG00000137501|Q9HCH5|SYTL2 9.38312468134398 0.5871240394367778 4 EPT 3 -1 21.682 0.0 0.0 2.1715 0.0 0.0 0.0 668.3595675104124 668.3595675104124 6.224862742317468 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EPT 2.1715 - 72 + 1 2.449 66919.9 1.0 1497 4082 5579 HBL1_DMSO_200M_050219_2,5581 HBL1_DMSO_200M_050219_2,5581,SQEAAIQPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5582 28.649 499.0 192500.0 25 0 14181.0 + 2474 AQYEDIAQK 9 125 533.2643259927784 1064.5140990523566 2 533.2636596560478 MULTI CID FTMS 0 0 0 5579 131370.03125 0.2503075970395422 -6 0.1167869567871093 3 Unmodified _AQYEDIAQK_ ENSG00000167768|ENST00000252244|KRT1 40.23920728925047 0.0741434193262949 4 [QA]YED{I|L}AQK 9 0 [QA] + + 57.485 19.476 9.7824 5.4001 5.4001 54.204 0.0 0.0 0.0 0.0 37.77973976023013 0.0 0.0 0 1.174742501084005 0.0 0.3494850021680094 0.6237125054200235 + + [QA]YED{I|L}AQK 5.4001 + + 399 + 1 2.449 75207.6 1.0 1498 4082 5579 HBL1_DMSO_200M_050219_2,5582 HBL1_DMSO_200M_050219_2,5582,AQYEDIAQK True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5584 28.655 151.0 404000.0 25 0 45859.0 + 6361 DVRQTPQV 8 80 471.7537716727671 941.4929904123342 2 471.7538635134697 MULTI CID FTMS 0 0 0 5583 426123.71875 0.8778264781097962 -5 0.1214466094970703 1 Unmodified _DVRQTPQV_ nc|ENSG00000166483|P30291-2|WEE1;ENSG00000166483|ENST00000450114|WEE1;ENST00000524549.1_1_11:9597437-9598815:+|nuORF 41.8396318013385 0.2035142800366642 4 [DV]RQTPQV 8 0 + 42.855 0.0 0.0 4.5518 4.5518 80.375 0.0 0.0 0.0 9.13811573052314 22.564119211036623 9.13811573052314 9.262137858390808 0 0.5682503180159344 1.6989700043360187 0.3807196863200844 0.0 + + [DV]RQTPQV;[DV]R[AG]TPQV;[DV]R[NP]{[QD]|[EN]|[WG]|[KD]|[RS]}V;[QP]{NN|[MP]|[D{I|L}]|[EV]}Q{[QD]|[EN]|[WG]|[KD]|[RS]}V;{[QV]|[N{I|L}]|[RA]|[KV]}[RD]TPQV 4.5518;3.568;2.0047;1.7335;1.5596 +;-;-;-;- + 209 1 2.442 53015.9 1.0 1499 4083 5583 HBL1_DMSO_200M_050219_2,5584 HBL1_DMSO_200M_050219_2,5584,DVRQTPQV False False DVRQTPQV 28.655395 471.75386351347 4407608.5 5583.0 nc|ENSG00000166483|P30291-2|WEE1;;ENSG00000166483|ENST00000450114|WEE1;;ENST00000524549.1_1_11:9597437-9598815:+|nuORF 4.6341705322265625 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5585 28.665 543.0 176290.0 25 0 15328.0 -1 LPPPPPPAM 9 132 466.74926325411946 931.4839735750388 2 466.7495605349541 MULTI CID FTMS 0 0 0 5583 165216.4375 0.2673221840169131 -31 0.4044437408447265 2 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 93.76273176245871 0.0134559174279925 4 [{I|L}P]PPPPPA{M(Oxidation (M))|F} 9 -1 + 69.382 0.0 0.0 7.4486 7.4486 92.57 0.0 0.0 0.0 19.93501263708417 12.04119982655925 12.04119982655925 12.04119982655925 0 1.9361818737241727 1.6989700043360187 0.0 0.0 [{I|L}P]PPPPPA{M(Oxidation (M))|F};[{I|L}P]PPPPP{M(Oxidation (M))|F}A;[{I|L}P][YK]PPA{M(Oxidation (M))|F};[{I|L}P]PPPP[WE];[{I|L}P]P[YK]PA{M(Oxidation (M))|F};[{I|L}P]PP[YK]A{M(Oxidation (M))|F};[{I|L}P][YK]PP{M(Oxidation (M))|F}A;[{I|L}P]P[YK]P{M(Oxidation (M))|F}A;[{I|L}P]PP[YK]{M(Oxidation (M))|F}A;[{I|L}P][YK]P[WE] 7.4486;6.1559;5.4106;5.3865;5.2763;5.04;4.1179;3.9837;3.7473;3.6988 +;-;-;-;-;-;-;-;-;- + 841 + 1 2.442 77055.1 1.0 1500 4083 5583 HBL1_DMSO_200M_050219_2,5585 HBL1_DMSO_200M_050219_2,5585,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5586 28.679 800.0 199080.0 25 0 10534.0 + 42107 VRLGDHHPVL 10 169 381.5525613438449 1141.635854631735 3 381.5521728396416 MULTI CID FTMS 0 0 0 5583 118876.0703125 0.194179023178049 -12 0.1909236907958984 3 Unmodified _VRLGDHHPVL_ REV__ENSG00000143126|ENST00000271332|CELSR2 20.871137199558856 0.4973446006067743 4 VPHHT 5 -1 61.67 0.0 0.0 5.4019 0.0 0.0 0.0 567.3278902643186 567.3278902643186 38.51868340340474 0.0 0.0 0.0 0 0.390959338239811 1.0 1.1307196863200843 0.0 VPHHT 5.4019 - 770 + 1 2.442 131587.6 0.4699999988079071 1501 4083 5583 HBL1_DMSO_200M_050219_2,5586 HBL1_DMSO_200M_050219_2,5586,VRLGDHHPVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5588 28.683 48.0 1154700.0 25 0 141440.0 -1 IPAPTILPC 9 48 491.2773514525076 980.5401499718153 2 491.2772399783134 MULTI CID FTMS 0 0 0 5587 1269883.75 1.0 0 0.0 1 Carbamidomethyl (C) _IPAPTILPC(Carbamidomethyl (C))_ ENSG00000135409|ENST00000257863|AMHR2;nc|ENSG00000135409|Q16671-3|AMHR2 21.74664581756881 0.2544899275067181 4 {I|L}PAPQ 5 -1 58.8 0.0 0.0 5.9967 0.0 0.0 0.0 471.23288904361567 471.23288904361567 46.32576888900239 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 {I|L}PAPQ 5.9967 - 55 + 1 2.442 47322.0 1.0 1502 4084 5587 HBL1_DMSO_200M_050219_2,5588 HBL1_DMSO_200M_050219_2,5588,IPAPTILPC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5591 28.703 800.0 175400.0 25 0 9261.3 + 28913 QAPPPPQQV 9 141 481.2586875982422 960.5028222632844 2 481.2591125369072 MULTI CID FTMS 0 0 0 5590 166453.375 0.0281890801155686 140 -3.87248420715332 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 103.74828524460852 0.0090107942103208 4 [QA]PPPPGAQV 10 2 + 71.877 0.0 0.0 7.4832 7.4832 80.319 0.0 0.0 0.0 2.6360803405286646 2.6360803405286646 2.6360803405286646 1.7609125905568137 0 2.223197507588033 2.0 0.0 0.8252574989159953 [QA]PPPPGAQV;[QA]PPPPQQV;[QA]PPPGPAQV;[QA]PPPPQN{I|L};[QA]PPGPPAQV;[QA]PPPPQ[AG]V;[QP]APPPGAQV;[AG]APPPPGAQV;[QA]PGPPPAQV;[QP]APPPQQV 7.4832;7.2999;6.9865;6.3986;6.3595;5.8079;5.4135;5.3626;5.2699;5.2301 -;+;-;-;-;-;-;-;-;- + 1567 1 2.442 108050.5 0.8399999737739563 1503 4086 5590 HBL1_DMSO_200M_050219_2,5591 HBL1_DMSO_200M_050219_2,5591,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5592 28.717 800.0 41860.0 25 0 2083.2 -1 0 70 754.3314313855461 2259.9724647568382 3 754.3330566287041 MULTI CID FTMS 0 0 0 5590 91106.5703125 1.0 0 0.0 2 4 {I|L}T{[SA]|[TG]}SY 6 -1 29.174 0.0 0.0 1.2909 0.0 0.0 1619.6540576296882 0.0 1619.6540576296882 0.0 18.20493438421167 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 {I|L}T{[SA]|[TG]}SY 1.2909 - 202 + 1 2.442 35391.2 0.5400000214576721 1504 4086 5590 HBL1_DMSO_200M_050219_2,5592 HBL1_DMSO_200M_050219_2,5592, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5593 28.731 800.0 52628.0 25 0 4825.3 + -1 DQSDEMEEEPS 11 84 656.2325131729533 1310.4504734127063 2 656.2324096560478 MULTI CID FTMS 0 0 0 5590 81777.546875 1.0 0 0.0 3 Oxidation (M) _DQSDEM(Oxidation (M))EEEPS_ REV__ENSG00000158163|ENST00000327532|DZIP1L;REV__nc|ENSG00000158163|Q8IYY4-2|DZIP1L 2.735195868890462 0.8622431031272658 4 [AG]AHDE 6 -1 17.132 0.0 0.0 1.3074 0.0 0.0 0.0 727.2024625086627 727.2024625086627 5.712399110043432 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [AG]AHDE 1.3074 - 55 1 2.442 37461.5 0.5600000023841858 1505 4086 5590 HBL1_DMSO_200M_050219_2,5593 HBL1_DMSO_200M_050219_2,5593,DQSDEMEEEPS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5595 28.737 189.0 302060.0 25 0 41428.0 + 4866 DGAPPSNQI 9 99 449.7169891694584 897.4194254057168 2 449.7168151736259 MULTI CID FTMS 0 0 0 5594 384685.9375 0.977722917759428 6 -0.1237602233886718 1 Unmodified _DGAPPSNQI_ ENSG00000112245|ENST00000626021|PTP4A1 37.97399986684836 0.0865783450051559 4 [DG]AP 4 5 41.727 0.0 0.0 4.6496 0.0 0.0 0.0 554.256053523411 554.256053523411 26.24220950028501 0.0 0.0 0.0 0 0.8494850021680094 1.3979400086720375 0.3054621874040891 0.0 + [DG]AP 4.6496 + + 194 1 2.442 49205.8 1.0 1506 4087 5594 HBL1_DMSO_200M_050219_2,5595 HBL1_DMSO_200M_050219_2,5595,DGAPPSNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5596 28.744 397.0 159820.0 25 0 26551.0 + 6105 DSRTNTAYV 9 88 513.746516404803 1025.4784798764058 2 513.7464477419853 MULTI CID FTMS 0 0 0 5594 237731.953125 0.725990188654397 5 -0.10400390625 2 Unmodified _DSRTNTAYV_ ENSG00000115762|ENST00000693505|PLEKHB2;nc|ENSG00000115762|Q96CS7-2|PLEKHB2;nc|ENSG00000115762|Q96CS7-3|PLEKHB2;nc|ENSG00000115762|Q96CS7-5|PLEKHB2;nc|ENSG00000115762|Q96CS7-6|PLEKHB2 22.736283301280096 0.2418982879461534 4 TAYV 4 5 35.165 0.0 0.0 3.4291 0.0 0.0 573.250780174025 0.0 573.250780174025 0.0 19.680475292681265 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 + TAYV 3.4291 + + 70 1 2.442 56823.5 1.0 1507 4087 5594 HBL1_DMSO_200M_050219_2,5596 HBL1_DMSO_200M_050219_2,5596,DSRTNTAYV False True DSRTNTAYV 28.744209 513.746447741985 2669689.75 5594.0 nc|ENSG00000115762|Q96CS7-5|PLEKHB2;;nc|ENSG00000115762|Q96CS7-2|PLEKHB2;;nc|ENSG00000115762|Q96CS7-3|PLEKHB2;;nc|ENSG00000115762|Q96CS7-6|PLEKHB2;;ENSG00000115762|ENST00000693505|PLEKHB2 3.326409022013346 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5598 28.749 23.0 2025100.0 25 0 277190.0 + 3859 DAKLDKSQI 9 85 509.2823896768746 1016.5502264205492 2 509.2825805544853 MULTI CID FTMS 0 0 0 5597 2540004.5 0.9550153775062882 3 -0.0450706481933593 1 Unmodified _DAKLDKSQI_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000425843.1_1_X:120337800-120338163:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 38.61474834105838 0.0830609365873449 4 {[DA]|[EG]}K{I|L}D 5 4 52.268 0.0 0.0 5.1417 0.0 0.0 0.0 471.256927430568 471.256927430568 31.298793729568857 0.0 0.0 0.0 0 1.7302046884880935 1.6989700043360187 0.805462187404089 0.0 + {[DA]|[EG]}K{I|L}D 5.1417 + + 155 1 2.442 44732.2 1.0 1508 4088 5597 HBL1_DMSO_200M_050219_2,5598 HBL1_DMSO_200M_050219_2,5598,DAKLDKSQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5601 28.757 33.0 1256900.0 25 0 418400.0 + 28553 PTQRSAPL 8 58 435.2455921735673 868.4766314139346 2 435.2456237673759 MULTI CID FTMS 0 0 0 5600 1848783.5 0.5766923351842002 9 -0.2725601196289062 1 Unmodified _PTQRSAPL_ REV__ENST00000466047.5_1_10:121609046-121633060:-|nuORF 15.847184025352805 0.6768015514314958 4 PT 2 -1 45.217 0.0 0.0 5.2064 0.0 0.0 0.0 667.3533559746041 667.3533559746041 32.99803764475705 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 PT 5.2064 + + 8 + 1 2.442 36795.6 1.0 1509 4090 5600 HBL1_DMSO_200M_050219_2,5601 HBL1_DMSO_200M_050219_2,5601,PTQRSAPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5602 28.761 203.0 385010.0 25 0 23374.0 10957 GALQQWLGP 9 112 323.8421010809009 968.5044738429026 3 323.8419372439384 MULTI CID FTMS 0 0 0 5600 225697.328125 0.1111728172224839 -10 0.1831645965576172 2 Unmodified _GALQQWLGP_ ENSG00000165716|ENST00000371692|DIPK1B;nc|ENSG00000165716|Q5VUD6-2|DIPK1B 8.593279151180031 0.6146971463335029 4 [AG]{I|L}QQP{[QN]|[E{I|L}]|[KN]}N 9 3 + 11.109 0.0 0.0 1.1471 1.1471 63.754 0.0 0.0 0.0 0.3073505902759965 1.431621889056398 0.3073505902759965 2.23538195826756 0 0.0 1.2218487496163564 0.0 0.5 [AG]{I|L}QQP{[QN]|[E{I|L}]|[KN]}N;[HT][R{I|L}]S{[QN]|[E{I|L}]|[KN]}N;[Q{I|L}]QQP{[QN]|[E{I|L}]|[KN]}N;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}T]H{[QN]|[E{I|L}]|[KN]}N;{[QN]|[E{I|L}]|[KN]}[HK]S{[QN]|[E{I|L}]|[KN]}N;{[QN]|[E{I|L}]|[KN]}[KS]H{[QN]|[E{I|L}]|[KN]}N 1.1471;0.91625;0.89263;0.32547;0.19455;0.19455 -;-;-;-;-;- 138 1 2.442 68869.9 1.0 1510 4090 5600 HBL1_DMSO_200M_050219_2,5602 HBL1_DMSO_200M_050219_2,5602,GALQQWLGP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5603 28.775 800.0 82370.0 25 0 5630.9 -1 LMYFCTDQL 9 115 575.2531829341588 1148.4918129351174 2 575.2528564333916 MULTI CID FTMS 0 0 0 5600 92586.6953125 1.0 0 0.0 3 Oxidation (M) _LM(Oxidation (M))YFCTDQL_ ENSG00000160007|ENST00000672722|ARHGAP35 8.593279151180031 0.6146971463335029 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[WR][KA]P 8 -1 16.404 0.0 0.0 1.4283 0.0 0.0 0.0 131.97485278816205 131.97485278816205 4.673799267481801 0.0 0.0 0.0 0 0.0 2.0 0.0 0.7742275032520141 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[WR][KA]P 1.4283 - 250 1 2.442 55683.9 0.5600000023841858 1511 4090 5600 HBL1_DMSO_200M_050219_2,5603 HBL1_DMSO_200M_050219_2,5603,LMYFCTDQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5604 28.789 800.0 83501.0 25 0 5652.7 + 26702 NYNYEQVNK 9 92 586.2726779492748 1170.5308029653495 2 586.2727538943291 MULTI CID FTMS 0 0 0 5600 90160.921875 1.0 0 0.0 4 Unmodified _NYNYEQVNK_ ENSG00000168813|ENST00000355898|ZNF507;ENST00000586664.1_1_19:32873361-32873986:+|nuORF 43.77239144664712 0.0547478964384323 4 [YN]NYEQVNK 9 0 + 65.345 0.0 0.0 5.5825 5.5825 83.965 0.0 0.0 0.0 51.88933438737884 11.796058402355456 11.796058402355456 9.208187539523747 0 0.7742275032520141 2.0 0.0 0.7302046884880937 + + [YN]NYEQVNK;[YN]GGYEQVNK;[YN]NYE[AG]VNK;[YN]NYEQVGGK;[YN]GGYE[AG]VNK;[YN]GGYEQVGGK;[YN]NYE[AG]VGGK;[YN]N{[HG]|PP}[WR][QP];[YN]N{[HG]|PP}[YK][{M(Oxidation (M))|F}E];[QP][WR][DP]N{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 5.5825;4.7958;4.7958;4.7958;4.0129;4.0129;4.0129;2.6998;2.0948;0.50907 +;-;-;-;-;-;-;-;-;- + 162 + 1 2.442 52543.5 0.550000011920929 1512 4090 5600 HBL1_DMSO_200M_050219_2,5604 HBL1_DMSO_200M_050219_2,5604,NYNYEQVNK True True NYNYEQVNK 28.789155 586.272753894329 535531.375 5600.0 ENSG00000168813|ENST00000355898|ZNF507;;ENST00000586664.1_1_19:32873361-32873986:+|nuORF 8.347299257914225 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5606 28.806 800.0 75751.0 25 0 10131.0 + 24361 MEQQDEETSAE 11 66 648.7499536681037 1295.4853544030072 2 648.7501098513603 MULTI CID FTMS 0 0 0 5605 40601.75390625 0.1660906041866395 9 -0.2739143371582031 1 Unmodified _MEQQDEETSAE_ REV__ENST00000582787.1_1_17:45971266-45971323:-|nuORF 7.101721422024254 0.8416415510090076 4 [QA]HDE 5 -1 36.753 0.0 0.0 2.837 0.0 0.0 0.0 712.2388693778697 712.2388693778697 18.169015600442577 0.0 0.0 0.0 0 1.8807196863200843 0.0 0.0 0.3252574989159953 [QA]HDE 2.837 - 38 1 2.442 50886.6 0.5799999833106995 1513 4091 5605 HBL1_DMSO_200M_050219_2,5606 HBL1_DMSO_200M_050219_2,5606,MEQQDEETSAE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5607 28.807 73.0 703700.0 25 0 74735.0 + 19400 LESIKNNSL 9 87 339.8576974294393 1016.551262888518 3 339.8571960330009 MULTI CID FTMS 0 0 0 5605 803970.3125 0.7315275090432058 5 -0.1475677490234375 2 Unmodified _LESIKNNSL_ REV__ENSG00000152990|ENST00000334304|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-2|ADGRA3 7.289230182591677 0.6602208344931196 4 {[DA]|[EG]}[{I|L}V]QR 6 -1 12.853 0.0 0.0 1.2644 0.0 0.0 0.0 331.157927277443 331.157927277443 0.0891402280857196 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}[{I|L}V]QR 1.2644 - 114 1 2.442 47118.1 1.0 1514 4091 5605 HBL1_DMSO_200M_050219_2,5607 HBL1_DMSO_200M_050219_2,5607,LESIKNNSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5608 28.821 800.0 192670.0 25 0 15131.0 + + 41629 VPPPPPSKV 9 138 459.2765245997975 916.538496266395 2 459.2767822146416 MULTI CID FTMS 0 0 0 5605 136259.59375 0.842120561349716 8 -0.2359066009521484 3 Unmodified _VPPPPLLQG_ ENSG00000140534|ENST00000268138|TICRR;nc|ENSG00000140534|Q7Z2Z1-2|TICRR 20.453626601364224 0.2830276176381075 4 VPPPP 5 -1 58.306 0.0 0.0 6.3616 0.0 0.0 0.0 426.2358492486938 426.2358492486938 48.12539775841829 0.0 0.0 0.0 0 0.555462187404089 2.0 0.0 0.0 VPPPP 6.3616 + + 193 + 1 2.442 123274.6 0.550000011920929 1515 4091 5605 HBL1_DMSO_200M_050219_2,5608 HBL1_DMSO_200M_050219_2,5608,VPPPPLLQG False False VPPPPPSKV 28.821053 459.276782214642 19442298.0 5605.0 ENSG00000140534|ENST00000268138|TICRR;;nc|ENSG00000140534|Q7Z2Z1-2|TICRR 5.976931095123291 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5609 28.835 800.0 248330.0 25 0 26781.0 13067 HDEAEKRLP 9 163 547.783633376571 1093.5527138199418 2 547.7822143435478 MULTI CID FTMS 0 0 0 5605 96521.375 0.2260168579432747 -10 0.1951484680175781 4 Unmodified _HDEAEKRLP_ ENSG00000132005|ENST00000254325|RFX1 14.838274106304384 0.4350285940865338 4 [HD]EAQADAG 9 5 42.938 0.0 0.0 3.9265 0.0 0.0 0.0 196.1667024276168 196.1667024276168 -0.4840095743367101 0.0 -0.4840095743367101 0.0 0 0.0 0.9208187539523752 1.4049471895720984 0.6861818737241735 [HD]EAQADAG 3.9265 - 10515 1 2.442 150000.0 0.4600000083446502 1516 4091 5605 HBL1_DMSO_200M_050219_2,5609 HBL1_DMSO_200M_050219_2,5609,HDEAEKRLP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5611 28.84 13.0 2657100.0 25 0 118230.0 + -1 CLCFAPCIAF 10 76 629.7758864997924 1257.5372200663846 2 629.7765380740166 MULTI CID FTMS 0 0 0 5610 4248607.0 0.4448215790564199 6 -0.1694469451904297 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 18.13498045792455 0.5432546531930572 4 [AG]AHDEAQQNA{M(Oxidation (M))|F} 12 -1 + 78.089 0.0 0.0 6.2097 6.2097 78.431 0.0 0.0 0.0 4.699846212402036 16.61181443446619 4.699846212402036 3.0102999566398125 0 0.9247425010840048 1.6989700043360187 0.0 0.5 [AG]AHDEAQQNA{M(Oxidation (M))|F};[AG]AHDEAQNQA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEAQNQA{M(Oxidation (M))|F};[AG]AHDEAQQGGA{M(Oxidation (M))|F};[AG]AHDEA[AG]QNA{M(Oxidation (M))|F};[AG]AHDEAQ[AG]NA{M(Oxidation (M))|F};[HD][QA]EAQQNA{M(Oxidation (M))|F};[HD]{[CP]|[EA]}QAQQNA{M(Oxidation (M))|F};[AG]AHDEA[AG]NQA{M(Oxidation (M))|F} 6.2097;5.9703;5.836;5.5966;5.4862;5.4862;5.4862;5.4486;5.3086;5.2468 -;-;-;-;-;-;-;-;-;- 887 1 2.45 32685.5 1.0 1517 4092 5610 HBL1_DMSO_200M_050219_2,5611 HBL1_DMSO_200M_050219_2,5611,CLCFAPCIAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5612 28.841 29.0 1811600.0 25 0 261590.0 + 45328 YSLELCQI 8 73 484.7436015185727 0 484.7436096072197 PEAK CID FTMS 0 0 0 5610 1314494.0 0.972577373248525 -1 0.0457725524902343 2 Unmodified _YSLELCQI_ REV__ENSG00000133640|ENST00000393217|LRRIQ1;REV__ENST00000525971.6_1_12:85431954-85518298:+|nuORF;REV__nc|ENSG00000133640|Q96JM4-2|LRRIQ1 36.04419817259434 0.1760516939127867 4 Q 1 -1 13.495 0.0 0.0 1.3949 0.0 0.0 250.0957396864025 586.2958405360275 836.3915802224301 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.3252574989159953 Q 1.3949 + + 55 + 1 2.45 49041.8 1.0 1518 4092 5610 HBL1_DMSO_200M_050219_2,5612 HBL1_DMSO_200M_050219_2,5612,YSLELCQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5613 28.855 800.0 101180.0 25 0 17394.0 -1 SLIYDSCGPQ 10 94 570.2570864125286 1138.499619891857 2 570.2579223513603 MULTI CID FTMS 0 0 0 5610 99647.2265625 0.6783869204348579 -3 0.0861148834228515 3 Carbamidomethyl (C) _SLIYDSC(Carbamidomethyl (C))GPQ_ ENST00000282041.9_2_18:43497781-43502345:-|nuORF 21.53697664764585 0.484802182336468 4 {[TV]|[{I|L}S]}{I|L}ED 5 -1 50.471 0.0 0.0 4.4331 0.0 0.0 0.0 578.2084444635374 578.2084444635374 32.310450018512924 0.0 0.0 0.0 0 0.75 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{I|L}ED 4.4331 - 108 + 1 2.45 67332.4 0.4900000095367431 1519 4092 5610 HBL1_DMSO_200M_050219_2,5613 HBL1_DMSO_200M_050219_2,5613,SLIYDSCGPQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5615 28.859 89.0 652900.0 25 0 65565.0 + 33258 SFPASSGVSH 10 67 488.23034326897925 974.4461336047584 2 488.2303649783134 MULTI CID FTMS 0 0 0 5614 573856.125 0.7788204426478527 -16 0.3437938690185547 1 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 49.93300154707207 0.0805441195901191 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 71.124 0.0 0.0 7.2989 7.2989 93.767 0.0 0.0 0.0 36.50998622776291 15.026975159433531 15.026975159433531 19.692489407922253 0 0.3807196863200844 2.0 1.0941876774005248 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}CAPDT;[PA]AA[W{M(Oxidation (M))|F}]PDT;{[QD]|[EN]|[WG]|[KD]|[RS]}{[QN]|[E{I|L}]|[KN]}SAPDT;[PA]S[SG]VSH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[PA]AA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[PA]AA[WE]P{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[PA]AA{[MG]|[TS]}SH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 7.2989;5.2781;4.8159;3.5701;2.5754;2.5278;1.7744;1.3948;1.2141;1.1383 +;-;-;-;-;-;-;-;-;- + 223 + 1 2.45 51605.2 1.0 1520 4093 5614 HBL1_DMSO_200M_050219_2,5615 HBL1_DMSO_200M_050219_2,5615,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5616 28.865 288.0 278960.0 25 0 16773.0 + 25065 MPVGPNAHKV 10 106 525.2813310007524 1048.5481090683047 2 525.2820312380791 MULTI CID FTMS 0 0 0 5614 252909.53125 0.2152901593802192 10 -0.2576808929443359 2 Unmodified _MPVGPNAHKV_ ENSG00000087365|ENST00000322535|SF3B2 56.17704186161178 0.0466144807663799 4 MPVG[NP]AHVK 10 2 + 67.651 0.0 0.0 6.4519 6.4519 75.437 0.0 0.0 0.0 25.479985151110583 0.947826021887451 0.947826021887451 0.947826021887451 0 1.2059771852360797 1.5228787452803376 0.0 0.2396518287104437 MPVG[NP]AHVK;MPVG[NP]AHKV;MPVV[DP]HRV;MVPG[NP]AHVK;MPVV[YV]WGV;MVPG[NP]AHKV;MVPV[DP]HRV;MPR[NP][QP][{I|L}P];{[ES]|[DT]|[{I|L}C]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVPMV;[QP][HN]KVPMV 6.4519;6.3615;4.9314;4.1814;4.1374;4.091;3.066;2.7646;2.2669;2.1914 -;+;-;-;-;-;-;-;-;- + 631 + 1 2.45 65547.1 1.0 1521 4093 5614 HBL1_DMSO_200M_050219_2,5616 HBL1_DMSO_200M_050219_2,5616,MPVGPNAHKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5617 28.879 800.0 156510.0 25 0 15569.0 + 26673 NYINQGVSH 9 122 516.2485630749178 1030.4825732166355 2 516.2468139529228 MULTI CID FTMS 0 0 0 5614 103591.0859375 0.0418569037155845 -12 0.2606773376464844 3 Unmodified _NYINQGVSH_ ENSG00000205339|ENST00000379719|IPO7 58.6788170122104 0.0268135626297836 4 [YN]{I|L}{NN|[MP]|[D{I|L}]|[EV]}{I|L}GSH 9 3 + 65.13 0.0 0.0 6.3203 6.3203 78.88 0.0 0.0 0.0 53.40797194541551 14.973024840566469 14.973024840566469 3.0102999566398125 0 0.805462187404089 2.0 0.5994850021680094 0.4247425010840047 [YN]{I|L}{NN|[MP]|[D{I|L}]|[EV]}{I|L}GSH;[YN]{I|L}{NN|[MP]|[D{I|L}]|[EV]}AVSH;[YN]{I|L}{NN|[MP]|[D{I|L}]|[EV]}G{I|L}SH;[YN]{I|L}{NN|[MP]|[D{I|L}]|[EV]}G[HS]{I|L};[QP]{M(Oxidation (M))|F}[HM]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[CT]|[{M(Oxidation (M))|F}G]}[PA][HM]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RV][HT]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[MT][HK]QQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 6.3203;6.0282;5.6018;2.7481;1.7132;0.45303;0.44336;0.28738 -;-;-;-;-;-;-;- 535 + 1 2.45 97654.3 0.5199999809265137 1522 4093 5614 HBL1_DMSO_200M_050219_2,5617 HBL1_DMSO_200M_050219_2,5617,NYINQGVSH True True NYINQGVSH 28.878594 516.246813952923 45397908.0 5614.0 ENSG00000205339|ENST00000379719|IPO7 8.375340779622396 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5618 28.892 800.0 140780.0 25 0 15971.0 + 17680 KPTGARPSAL 10 113 499.2934568128513 996.5723606925028 2 499.2934448122978 MULTI CID FTMS 0 0 0 5614 91774.7265625 0.0378987986788342 87 -2.2889652252197266 4 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 23.78978130925829 0.4341852049148378 4 KPTG 4 6 42.607 0.0 0.0 4.2754 0.0 0.0 0.0 610.3321627252561 610.3321627252561 29.8430060173148 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + KPTG 4.2754 + + 157 + 1 2.45 88913.6 0.4799999892711639 1523 4093 5614 HBL1_DMSO_200M_050219_2,5618 HBL1_DMSO_200M_050219_2,5618,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5619 28.906 800.0 57663.0 25 0 3842.3 + 28849 QAHSSSMWMLC 11 83 640.7665928996332 1279.5186328660664 2 640.7659789919853 MULTI CID FTMS 0 0 0 5614 84295.6875 0.5058248023223827 9 -0.238372802734375 5 Unmodified _QAHSSSMWMLC_ REV__ENST00000397728.7_1_21:47609640-47609970:-|nuORF 8.155526934196011 0.8366696279279818 4 [QA]HDQ 5 -1 34.208 0.0 0.0 2.6735 0.0 0.0 0.0 697.2728365533811 697.2728365533811 22.235790156711097 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.0 [QA]HDQ 2.6735 - 257 + 1 2.45 38151.3 0.4399999976158142 1524 4093 5614 HBL1_DMSO_200M_050219_2,5619 HBL1_DMSO_200M_050219_2,5619,QAHSSSMWMLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5621 28.912 175.0 301210.0 25 0 28528.0 + 25068 MPVGPNAHKV 10 92 350.52364336165704 1048.5491006851712 3 350.5233642458916 MULTI CID FTMS 0 0 0 5620 245652.921875 0.1535358710045268 13 -0.284677505493164 1 Unmodified _MPVGPNAHKV_ ENSG00000087365|ENST00000322535|SF3B2 17.11289562659939 0.5604042439455784 4 [VP]G{M(Oxidation (M))|F}{M(Oxidation (M))|F}G 6 7 33.645 0.0 0.0 3.2087 0.0 0.0 0.0 441.21612451838456 441.21612451838456 15.791812460476248 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VP]G{M(Oxidation (M))|F}{M(Oxidation (M))|F}G 3.2087 - 136 1 2.45 54187.0 1.0 1525 4094 5620 HBL1_DMSO_200M_050219_2,5621 HBL1_DMSO_200M_050219_2,5621,MPVGPNAHKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5622 28.917 243.0 268240.0 25 0 21760.0 + 2475 AQYEDIAQK 9 97 533.2643259927784 1064.5140990523566 2 533.2641479372978 MULTI CID FTMS 0 0 0 5620 336564.125 0.6412768313813286 6 -0.1568260192871093 2 Unmodified _AQYEDIAQK_ ENSG00000167768|ENST00000252244|KRT1 47.594388314883695 0.0456443387682827 4 [QA]YED{I|L}AQK 9 0 [QA] + + 63.052 18.684 9.3847 5.9231 5.9231 56.391 0.0 0.0 0.0 0.0 36.92040120633002 0.0 0.0 0 1.2614393726401687 0.0 0.4247425010840047 0.6505149978319906 + + [QA]YED{I|L}AQK 5.9231 + + 244 + 1 2.45 53164.2 1.0 1526 4094 5620 HBL1_DMSO_200M_050219_2,5622 HBL1_DMSO_200M_050219_2,5622,AQYEDIAQK True True AQYEDIAQK 28.916733 533.264147937298 7281134.5 5620.0 ENSG00000167768|ENST00000252244|KRT1 8.126634120941162 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5623 28.918 25.0 2301900.0 25 0 138400.0 + 6091 DSRITHQI 8 73 485.2596021747377 968.5046514162756 2 485.2603637576103 MULTI CID FTMS 0 0 0 5620 1940916.25 0.7578159239964899 -4 0.1537418365478515 3 Unmodified _DSRITHQI_ ENSG00000100029|ENST00000354694|PES1;nc|ENSG00000100029|O00541-2|PES1 51.629811660486645 0.1315812959312577 4 [Q{I|L}]{[ET]|[MV]}THQ{I|L} 8 4 + 44.416 0.0 0.0 4.5861 4.5861 67.883 0.0 0.0 0.0 0.9640156839957824 4.924843744914611 0.9640156839957824 0.9640156839957824 0 0.9489700043360187 0.0 0.7302046884880937 0.0 [Q{I|L}]{[ET]|[MV]}THQ{I|L};{[QN]|[E{I|L}]|[KN]}[QT]THQ{I|L};[Q{I|L}]{[ET]|[MV]}TH[AG]{I|L};[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}THQ{I|L};{[QN]|[E{I|L}]|[KN]}[QT]TH[AG]{I|L};{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PTHQ{I|L};{I|L}{[CA]|SS}{[RE]|[WV]}HQ{I|L};{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PTH{I|L}Q;{I|L}{[CA]|SS}{[RE]|[WV]}H{I|L}Q;[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TH[AG]{I|L} 4.5861;4.4865;3.6297;3.5713;3.5302;3.4732;3.3719;3.3455;3.2441;2.615 -;-;-;-;-;-;-;-;-;- 406 1 2.45 51137.8 1.0 1527 4094 5620 HBL1_DMSO_200M_050219_2,5623 HBL1_DMSO_200M_050219_2,5623,DSRITHQI False True DSRITHQI 28.917912 485.26036375761 15851549.0 5620.0 ENSG00000100029|ENST00000354694|PES1;;nc|ENSG00000100029|O00541-2|PES1 2.152821898460388 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5624 28.92 113.0 516150.0 25 0 32741.0 + 3336 AYMPPTSEA 9 85 491.7129692273722 981.4113855215444 2 491.7129699587822 MULTI CID FTMS 0 0 0 5620 439116.15625 0.733335563514391 -4 0.1537418365478515 4 Oxidation (M) _AYM(Oxidation (M))PPTSEA_ ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP 44.40701690623563 0.0526327925666318 4 [PA]VD{[MS]|[{M(Oxidation (M))|F}A]}Y{[CP]|[EA]} 9 6 + 27.61 0.0 0.0 2.8133 2.8133 69.776 0.0 0.0 0.0 5.154083493581538 5.558481052291672 5.154083493581538 5.154083493581538 0 0.4247425010840047 1.3979400086720375 0.5 0.0 [PA]VD{[MS]|[{M(Oxidation (M))|F}A]}Y{[CP]|[EA]};[TP]PS{[MS]|[{M(Oxidation (M))|F}A]}Y{[CP]|[EA]};[{I|L}P]GD{[MS]|[{M(Oxidation (M))|F}A]}Y{[CP]|[EA]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}P{[RE]|[WV]}{[CP]|[EA]};[TP]PA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{[CP]|[EA]};[PA][TP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}Y[WH]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[PG]{I|L}D{[MS]|[{M(Oxidation (M))|F}A]}Y{[CP]|[EA]};{[ES]|[DT]|[{I|L}C]}[TP][VS]Y{[CP]|[EA]};{[CP]|[EA]}[DV][VS]Y{[CP]|[EA]} 2.8133;2.2881;2.2849;1.8032;1.5526;1.1861;1.17;0.96603;0.4986;0.47391 -;-;-;-;-;-;-;-;-;- 258 1 2.45 51600.3 1.0 1528 4094 5620 HBL1_DMSO_200M_050219_2,5624 HBL1_DMSO_200M_050219_2,5624,AYMPPTSEA True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5625 28.926 323.0 282480.0 25 0 33349.0 + -1 HLCCWCGSI 9 114 539.7178392183204 1077.4211255034406 2 539.7183105349541 MULTI CID FTMS 0 0 0 5620 276329.4375 0.1109523843939992 -12 0.2825164794921875 5 Carbamidomethyl (C) _HLCC(Carbamidomethyl (C))WCGSI_ REV__ENSG00000103657|ENST00000443617|HERC1 24.67388899826682 0.2172451872415813 4 SQVCCC{I|L} 7 -1 45.494 0.0 0.0 4.2225 0.0 0.0 323.12356606795214 0.0 323.12356606795214 0.0 13.591141486435044 0.0 0.0 0 0.3494850021680094 0.0 1.5044321917401078 0.0 SQVCCC{I|L} 4.2225 - 364 1 2.45 74164.3 1.0 1529 4094 5620 HBL1_DMSO_200M_050219_2,5625 HBL1_DMSO_200M_050219_2,5625,HLCCWCGSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5626 28.928 105.0 527950.0 25 0 70550.0 + 36691 TDAPTSPRV 9 77 472.2456070641282 942.4766611950564 2 472.2443115115166 MULTI CID FTMS 0 0 0 5620 286913.65625 0.5602336286611568 -5 0.1574306488037109 6 Unmodified _TDAPTSPRV_ ENSG00000105063|ENST00000412770|PPP6R1 31.26834338654808 0.1333407332142048 4 {[ES]|[DT]|[{I|L}C]}APTS[RP]V 9 0 + 33.46 0.0 0.0 3.5502 3.5502 79.94 0.0 0.0 0.0 21.67728651550294 3.053948010664314 3.053948010664314 20.51152522447381 0 0.5 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}APTS[RP]V;{[ES]|[DT]|[{I|L}C]}AV{[DA]|[EG]}[RP]V;{[WT]|[RM]}V[DV][QP]V 3.5502;1.3739;0.41853 +;-;- + 109 + 1 2.45 51634.9 1.0 1530 4094 5620 HBL1_DMSO_200M_050219_2,5626 HBL1_DMSO_200M_050219_2,5626,TDAPTSPRV False True TDAPTSPRV 28.928373 472.244311511517 7742254.0 5620.0 ENSG00000105063|ENST00000412770|PPP6R1 4.889681975046794 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5628 28.933 105.0 622550.0 25 0 42600.0 42209 VSFRRDHLL 9 93 381.5525613438449 1141.635854631735 3 381.5523254275322 MULTI CID FTMS 0 0 0 5627 612198.3125 1.0 0 0.0 1 Unmodified _VSFRRDHLL_ ENSG00000118217|ENST00000367942|ATF6;ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B 24.99096001346401 0.2132109383330889 4 VPHHT 5 7 64.813 0.0 0.0 5.6772 0.0 0.0 0.0 567.3210543268186 567.3210543268186 43.58349385648225 0.0 0.0 0.0 0 0.5044321917401079 1.0969100130080565 1.5356668758921828 0.0 VPHHT 5.6772 - 213 + 1 2.45 62240.9 1.0 1531 4095 5627 HBL1_DMSO_200M_050219_2,5628 HBL1_DMSO_200M_050219_2,5628,VSFRRDHLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5629 28.937 182.0 303700.0 25 0 33499.0 -1 LPPPPPPAM 9 100 466.74926325411946 931.4839735750388 2 466.7491638064384 MULTI CID FTMS 0 0 0 5627 278647.75 0.4508554126244175 -19 0.421478271484375 2 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 79.93452657146344 0.0175326119056068 4 [{I|L}P]PPPPPA{M(Oxidation (M))|F} 9 -1 + 77.049 0.0 0.0 8.2717 8.2717 95.825 0.0 0.0 0.0 31.977437731477423 16.478174818886373 16.478174818886373 19.20818753952375 0 1.4476212463643423 1.6989700043360187 0.0 0.0 [{I|L}P]PPPPPA{M(Oxidation (M))|F};[{I|L}P]PPPP[WE];[{I|L}P]PP[YK]A{M(Oxidation (M))|F};[{I|L}P]P[YK]PA{M(Oxidation (M))|F};[{I|L}P][YK]PPA{M(Oxidation (M))|F};[{I|L}P]P[YK][WE];[{I|L}P][YK]P[WE];{[HG]|PP}APPPP{I|L}{M(Oxidation (M))|F};[{I|L}P][RV]{[ET]|[MV]}A{M(Oxidation (M))|F};[{I|L}P]QQ[KT]A{M(Oxidation (M))|F} 8.2717;6.2096;6.124;5.7153;5.4729;3.6605;3.4181;3.1991;3.1853;3.1135 +;-;-;-;-;-;-;-;-;- + 396 + 1 2.45 48815.2 1.0 1532 4095 5627 HBL1_DMSO_200M_050219_2,5629 HBL1_DMSO_200M_050219_2,5629,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5631 28.947 406.0 164870.0 25 0 22012.0 + 2800 ATVGRVSNV 9 111 451.756205116013 901.497857298826 2 451.7561523318291 MULTI CID FTMS 0 0 0 5630 208800.4375 1.0 0 0.0 1 Unmodified _ATVGRVSNV_ ENSG00000112651|ENST00000388752|MRPL2;ENST00000485654.1_1_6:43022014-43023405:-|nuORF 59.36838082759317 0.0264317782606298 4 [TA]VGRVSNV 9 0 + 70.626 0.0 0.0 7.8343 7.8343 94.48 0.0 0.0 0.0 52.26403468139864 2.626656038284452 2.626656038284452 15.515384402724592 0 1.5172203223519531 2.0 0.3807196863200844 1.055462187404089 + + [TA]VGRVSNV;[TA]VGRVSGGV;{[TV]|[{I|L}S]}[PS]{M(Oxidation (M))|F}VV[PG];{[TV]|[{I|L}S]}[PS]{M(Oxidation (M))|F}V[PG]V;[PG]T[Y{I|L}]VV[PG];[DV]{[VA]|[{I|L}G]}{M(Oxidation (M))|F}VV[PG];[PG]T[Y{I|L}]V[PG]V;{[TV]|[{I|L}S]}[PS]{M(Oxidation (M))|F}[RP]V;VV{[DA]|[EG]}{M(Oxidation (M))|F}VV[PG];[DG][{I|L}V]{M(Oxidation (M))|F}VV[PG] 7.8343;6.1133;4.0494;3.2444;3.1403;2.406;2.3353;2.1035;1.7801;1.7382 +;-;-;-;-;-;-;-;-;- + 543 + 1 2.45 55839.5 1.0 1533 4096 5630 HBL1_DMSO_200M_050219_2,5631 HBL1_DMSO_200M_050219_2,5631,ATVGRVSNV True True ATVGRVSNV 28.946504 451.756152331829 1389655.75 5630.0 ENSG00000112651|ENST00000388752|MRPL2;;ENST00000485654.1_1_6:43022014-43023405:-|nuORF 6.656519412994385 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5632 28.96 800.0 143400.0 25 0 24221.0 + + 33317 RQVTITGSAA 10 126 502.2823016319716 1002.5500503307431 2 502.2822448611259 MULTI CID FTMS 0 0 0 5630 83980.4765625 0.768690669521323 -5 0.1475677490234375 2 Unmodified _SFVIGPNKAA_ nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;nc|ENSG00000197111|Q15366-8|PCBP2;ENST00000437262.1_1_21:40543078-40543174:-|nuORF;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000197111|Q15366-7|PCBP2 13.90604991867851 0.6142120002215601 4 TGSAA 5 -1 30.273 0.0 0.0 3.0196 0.0 0.0 597.3592353795805 0.0 597.3592353795805 0.0 19.43565393373564 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 TGSAA 3.0196 - 175 1 2.45 90801.5 0.449999988079071 1534 4096 5630 HBL1_DMSO_200M_050219_2,5632 HBL1_DMSO_200M_050219_2,5632,SFVIGPNKAA False False RQVTITGSAA 28.960323 502.282244861126 2221461.0 5630.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;;nc|ENSG00000197111|Q15366-8|PCBP2;;ENST00000437262.1_1_21:40543078-40543174:-|nuORF;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-4|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000197111|Q15366-7|PCBP2 1.9344526529312132 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5634 28.977 800.0 154890.0 25 0 7484.1 + 28914 QAPPPPQQV 9 152 481.2586875982422 960.5028222632844 2 481.2585937380791 MULTI CID FTMS 0 0 0 5633 113009.5546875 0.019138304590764 151 -4.831659317016602 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 78.14939416004806 0.0179651292570206 4 [QA]PPP[PG]AQV 10 2 + 55.41 0.0 0.0 5.7688 5.7688 78.181 0.0 0.0 0.0 10.672874778693355 35.82273057248628 10.672874778693355 3.802112417116057 0 1.992992819099939 2.0 0.0 0.8366968715561641 [QA]PPP[PG]AQV;[QA]PPG{[HG]|PP}AQV;[QA]PPP[QP]QV;[QA]PG[YK]AQV;[QA]PGP{[HG]|PP}AQV;[AG]APPP[PG]AQV;[AG]PAPP[PG]AQV;[AG]APPG{[HG]|PP}AQV;[QA]PP[{I|L}T][HT]P;[AG]APPP[QP]QV 5.7688;5.373;5.0888;4.6572;4.2137;3.8512;3.4607;3.4554;3.3873;3.1666 -;-;+;-;-;-;-;-;-;- + 648 1 2.45 98210.5 0.5 1535 4097 5633 HBL1_DMSO_200M_050219_2,5634 HBL1_DMSO_200M_050219_2,5634,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5635 28.991 800.0 127530.0 25 0 13414.0 + 5613 DPAPAHTSI 9 135 454.72711973902153 907.4396865448432 2 454.7271911501884 MULTI CID FTMS 0 0 0 5633 90271.3984375 0.6033569964622796 -4 0.105661392211914 2 Unmodified _DPAPAHTSI_ ENSG00000175455|ENST00000409697|CCDC14;nc|ENSG00000175455|Q49A88-2|CCDC14;nc|ENSG00000175455|Q49A88-3|CCDC14;nc|ENSG00000175455|Q49A88-5|CCDC14;nc|ENSG00000175455|Q49A88-6|CCDC14;nc|ENSG00000175455|Q49A88|CCDC14 72.96794272382148 0.0199516581995792 4 DPAPA[HT]S{I|L} 9 0 + 69.789 0.0 0.0 7.6907 7.6907 90.128 0.0 0.0 0.0 25.479428783252885 9.107768156582353 9.107768156582353 9.107768156582353 0 1.0 1.6989700043360187 1.2198565171985374 0.0 + + DPAPA[HT]S{I|L};DPAPA[HT]TV;[DP][K{I|L}][WY]S;[DP]A{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}{[HG]|PP};[PA]H[YR]A{[HG]|PP};[PA]D{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}{[HG]|PP};[PA]T[{I|L}A][WY]S;D[VS]{I|L}ST{[WT]|[RM]};[DP][Q{I|L}]{[QN]|[E{I|L}]|[KN]}{[HG]|PP};[PA]A[{I|L}T][WY]S 7.6907;6.687;4.7625;3.8001;3.376;2.961;2.8643;2.361;2.3427;2.0707 +;-;-;-;-;-;-;-;-;- + 488 + 1 2.45 86743.1 0.449999988079071 1536 4097 5633 HBL1_DMSO_200M_050219_2,5635 HBL1_DMSO_200M_050219_2,5635,DPAPAHTSI True True DPAPAHTSI 28.990516 454.727191150188 1080109.25 5633.0 nc|ENSG00000175455|Q49A88-3|CCDC14;;nc|ENSG00000175455|Q49A88-2|CCDC14;;nc|ENSG00000175455|Q49A88-5|CCDC14;;nc|ENSG00000175455|Q49A88|CCDC14;;ENSG00000175455|ENST00000409697|CCDC14;;nc|ENSG00000175455|Q49A88-6|CCDC14 5.955570220947266 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5636 29.004 800.0 148400.0 25 0 16487.0 + 25782 NKEHEEHF 8 127 535.2364099885674 1068.4582670439347 2 536.2411987185478 MULTI CID FTMS 0 0 0 5633 88889.71875 0.1002544999380033 -20 0.4494552612304687 3 Unmodified _NKEHEEHF_ REV__ENSG00000062650|ENST00000298767|WAPL;REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL;REV__nc|ENSG00000062650|Q7Z5K2-3|WAPL 13.50788311687929 0.7113601687236069 4 [QP]QNS 5 -1 31.566 0.0 0.0 2.9543 0.0 0.0 0.0 511.1900535031722 511.1900535031722 14.866343384831474 0.0 0.0 0.0 0 0.0 0.721246399047171 0.3807196863200844 0.6109243748081782 [QP]QNS 2.9543 - 248 1 2.45 97479.5 0.4699999988079071 1537 4097 5633 HBL1_DMSO_200M_050219_2,5636 HBL1_DMSO_200M_050219_2,5636,NKEHEEHF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5638 29.016 444.0 215370.0 25 0 35493.0 + 3860 DAKLDKSQI 9 108 509.2823896768746 1016.5502264205492 2 509.2823058962822 MULTI CID FTMS 0 0 0 5637 183579.046875 0.0690238197426708 13 -0.2508277893066406 1 Unmodified _DAKLDKSQI_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000425843.1_1_X:120337800-120338163:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 83.27773906761396 0.0167225894082269 4 DAK{I|L}DKSQ{I|L} 9 0 + 89.344 0.0 0.0 8.7889 8.7889 90.363 0.0 0.0 0.0 59.650954417670974 12.245462655597096 12.245462655597096 7.059771852360797 0 2.447621246364342 1.6989700043360187 0.6549471895720984 0.6237125054200234 + + DAK{I|L}DKSQ{I|L};DA{I|L}KDKSQ{I|L};DAK{I|L}DKS[AG]{I|L};{I|L}EGKDKSQ{I|L};{I|L}SN{I|L}DKSQ{I|L};DA{I|L}KDKS[AG]{I|L};{I|L}EGKDKS[AG]{I|L};{I|L}SN{I|L}DKS[AG]{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WP]KSQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WK]PSQ{I|L} 8.7889;8.0944;7.2695;7.063;6.6607;6.575;5.5437;5.1413;0.90728;0.49204 +;-;-;-;-;-;-;-;-;- + 1083 + 1 2.45 77859.2 1.0 1538 4098 5637 HBL1_DMSO_200M_050219_2,5638 HBL1_DMSO_200M_050219_2,5638,DAKLDKSQI True True DAKLDKSQI 29.015635 509.282305896282 48148950.0 5637.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;;ENST00000425843.1_1_X:120337800-120338163:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 7.859482606252034 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5639 29.019 172.0 287540.0 25 0 37159.0 + 4867 DGAPPSNQI 9 90 449.7169891694584 897.4194254057168 2 449.7169067263603 MULTI CID FTMS 0 0 0 5637 317365.03125 0.8066192030961934 17 -0.3893680572509765 2 Unmodified _DGAPPSNQI_ ENSG00000112245|ENST00000626021|PTP4A1 30.63653989081413 0.1413794767160703 4 [DG]AP 4 5 38.57 0.0 0.0 4.2979 0.0 0.0 0.0 554.2579013180792 554.2579013180792 23.96591250700361 0.0 0.0 0.0 0 0.9247425010840048 1.3010299956639813 0.25 0.0 + [DG]AP 4.2979 + + 96 1 2.45 44611.1 1.0 1539 4098 5637 HBL1_DMSO_200M_050219_2,5639 HBL1_DMSO_200M_050219_2,5639,DGAPPSNQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5640 29.025 335.0 230040.0 25 0 50760.0 + 26961 PTGARPSAL 9 69 434.88222640213246 0 434.8820678591728 PEAK CID FTMS 0 0 0 5637 136202.703125 0.6884998216150438 25 -0.6053180694580078 3 Unmodified _PECERRPSICL_ ENST00000473611.5_1_6:33247055-33247262:-|nuORF;ENSG00000227057|ENST00000374617|WDR46 6.2057823575117 0.47618401536486 4 TG 2 11 12.959 0.0 0.0 1.4934 0.0 0.0 96.3261726986761 610.3285616510374 706.6547343497135 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TG 1.4934 - 3 + 1 2.45 67301.0 1.0 1540 4098 5637 HBL1_DMSO_200M_050219_2,5640 HBL1_DMSO_200M_050219_2,5640,PECERRPSICL False False PTGARPSAL 29.025057 434.882067859173 59921934.0 5637.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 2.975306590398153 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5642 29.03 26.0 1980100.0 25 0 206220.0 + 6092 DSRITHQI 8 88 323.8421010809009 968.5044738429026 3 323.8418151736259 MULTI CID FTMS 0 0 0 5641 2026413.375 0.99816017153425 -1 0.0206871032714843 1 Unmodified _DSRITHQI_ ENSG00000100029|ENST00000354694|PES1;nc|ENSG00000100029|O00541-2|PES1 15.847184025352805 0.6768015514314958 4 [AG]{I|L}QQP{[QN]|[E{I|L}]|[KN]}N 9 8 + 25.369 0.0 0.0 2.6194 2.6194 72.682 0.0 0.0 0.0 8.484769324350552 9.208187539523752 8.484769324350552 8.484769324350552 0 0.0 1.5228787452803376 0.0 0.5 [AG]{I|L}QQP{[QN]|[E{I|L}]|[KN]}N;[Q{I|L}]QQP{[QN]|[E{I|L}]|[KN]}N;{[QD]|[EN]|[WG]|[KD]|[RS]}H[{I|L}T]{[QN]|[E{I|L}]|[KN]}N 2.6194;1.7433;0.35449 -;-;- 103 1 2.45 45957.7 1.0 1541 4099 5641 HBL1_DMSO_200M_050219_2,5642 HBL1_DMSO_200M_050219_2,5642,DSRITHQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5643 29.043 745.0 151920.0 25 0 13198.0 + -1 TARPQAPATV 10 126 506.28240960165937 1010.5502662701188 2 506.2827636599541 MULTI CID FTMS 0 0 0 5641 73606.640625 0.3832528629710693 -9 0.2725601196289062 2 Oxidation (M) _VM(Oxidation (M))PPALPATV_ nc|ENSG00000103363|Q15370-2|ELOB;ENSG00000103363|ENST00000409906|ELOB 32.30548876998284 0.2428506522065767 4 ETV 3 -1 32.056 0.0 0.0 3.1721 0.0 0.0 663.3777026488282 0.0 663.3777026488282 0.0 13.37746949029819 0.0 0.0 0 1.424742501084005 0.0 0.3807196863200844 0.0 ETV 3.1721 - 426 + 1 2.45 93399.4 1.0 1542 4099 5641 HBL1_DMSO_200M_050219_2,5643 HBL1_DMSO_200M_050219_2,5643,VMPPALPATV False False TARPQAPATV 29.042751 506.282763659954 1330575.25 5641.0 nc|ENSG00000103363|Q15370-2|ELOB;;ENSG00000103363|ENST00000409906|ELOB 4.15847380956014 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5644 29.053 613.0 258640.0 25 0 18599.0 + 39487 VARPSSGTTI 10 131 494.7748639577574 987.5351749823149 2 494.7747375369072 MULTI CID FTMS 0 0 0 5641 112674.9609375 0.0221175456312556 -15 0.3465023040771484 3 Unmodified _VARPSSGTTI_ ENST00000381140.8_3_13:27998935-28001286:+|nuORF;ENST00000466776.5_1_13:27998904-28001286:+|nuORF 47.594388314883695 0.0942698883389255 4 {[VA]|[{I|L}G]}R[PS]SGTT{I|L} 10 0 + 53.492 0.0 0.0 5.4167 5.4167 73.633 0.0 0.0 0.0 2.186334732404944 11.505149978319906 2.186334732404944 2.186334732404944 0 0.8494850021680094 0.958607314841775 1.3807196863200843 0.0 + + {[VA]|[{I|L}G]}R[PS]SGTT{I|L};[PS]{I|L}{[NV]|[RG]}SGTT{I|L};[PS]G[R{I|L}]SGTT{I|L};{[TV]|[{I|L}S]}P{[NV]|[RG]}SGTT{I|L};{[VA]|[{I|L}G]}R[RD]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L} 5.4167;5.1953;4.7805;3.7382;2.8102 +;-;-;-;- + 328 1 2.45 122883.3 1.0 1543 4099 5641 HBL1_DMSO_200M_050219_2,5644 HBL1_DMSO_200M_050219_2,5644,VARPSSGTTI True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5645 29.063 547.0 137480.0 25 0 24146.0 + 10178 FQDDDQTRV 9 89 562.254364119948 1122.494175306696 2 562.2546874880791 MULTI CID FTMS 0 0 0 5641 112171.3671875 0.6644707747233025 -1 0.0206871032714843 4 Unmodified _FQDDDQTRV_ ENSG00000007923|ENST00000377577|DNAJC11;ENST00000472414.1_1_1:6698189-6705162:-|nuORF;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;nc|ENSG00000007923|Q9NVH1-3|DNAJC11 43.9818466556824 0.0535980856389242 4 {M(Oxidation (M))|F}QDDDQT[RV] 9 0 + 70.824 0.0 0.0 6.3096 6.3096 86.836 0.0 0.0 0.0 59.5872875024979 4.762036441594191 4.762036441594191 9.208187539523747 0 0.9247425010840048 0.0 0.8494850021680094 0.5 + + {M(Oxidation (M))|F}QDDDQT[RV];{M(Oxidation (M))|F}[AG]DDDQT[RV];{M(Oxidation (M))|F}QDDD[AG]T[RV];{M(Oxidation (M))|F}QDD[WR]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}[AG]DDD[AG]T[RV];{M(Oxidation (M))|F}QD[WR]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}[AG]DD[WR]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QD]|[EN]|[WG]|[KD]|[RS]}W[R{M(Oxidation (M))|F}]DQE;{M(Oxidation (M))|F}QV[VS]GDD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}[WR]DQE 6.3096;5.4892;5.4892;4.6882;4.6728;4.0416;3.863;3.7075;3.5733;3.486 +;-;-;-;-;-;-;-;-;- + 171 + 1 2.45 60781.3 1.0 1544 4099 5641 HBL1_DMSO_200M_050219_2,5645 HBL1_DMSO_200M_050219_2,5645,FQDDDQTRV True True FQDDDQTRV 29.063068 562.254687488079 1101908.75 5641.0 nc|ENSG00000007923|Q9NVH1-3|DNAJC11;;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;;ENST00000472414.1_1_1:6698189-6705162:-|nuORF;;ENSG00000007923|ENST00000377577|DNAJC11 7.695210138956706 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5647 29.079 714.0 234560.0 25 0 15030.0 41658 VPPVVLFF 8 136 459.2765245997975 916.538496266395 2 459.2760497927666 MULTI CID FTMS 0 0 0 5646 87961.9375 0.5436281890052871 17 -0.3675746917724609 1 Unmodified _VPPVVLFF_ ENST00000487084.1_1_7:105550697-105550985:+|nuORF 24.20995872069341 0.5349487244130675 4 VPPP 4 5 60.165 0.0 0.0 6.5644 0.0 0.0 0.0 523.2887686430781 523.2887686430781 49.78642178803096 0.0 0.0 0.0 0 0.8226825097560423 2.0 0.0 0.0 VPPP 6.5644 - 194 + 1 2.455 132636.3 1.0 1545 4100 5646 HBL1_DMSO_200M_050219_2,5647 HBL1_DMSO_200M_050219_2,5647,VPPVVLFF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5648 29.082 148.0 434550.0 25 0 33685.0 + 5948 DQHSAVDCGF 10 109 360.1477651097267 1077.4214659293802 3 360.1477538943291 MULTI CID FTMS 0 0 0 5646 516094.5625 0.934486779989396 -4 0.1263465881347656 2 Unmodified _DQHSAVDCGF_ REV__ENST00000421413.6_1_6:133646543-133785920:+|nuORF 5.296884461304476 0.7021353017287152 4 {NN|[MP]|[D{I|L}]|[EV]}[Y{M(Oxidation (M))|F}]VC 6 -1 34.025 0.0 0.0 3.158 0.0 0.0 0.0 334.1046073690865 334.1046073690865 12.571355421040742 0.0 0.0 0.0 0 0.5 2.0 0.5891368308784531 0.0 {NN|[MP]|[D{I|L}]|[EV]}[Y{M(Oxidation (M))|F}]VC 3.158 - 162 1 2.455 60528.3 1.0 1546 4100 5646 HBL1_DMSO_200M_050219_2,5648 HBL1_DMSO_200M_050219_2,5648,DQHSAVDCGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5649 29.087 280.0 364410.0 25 0 68902.0 -1 0 123 337.21569882883205 672.4168447244641 2 337.2147094607353 MULTI CID FTMS 0 0 0 5646 216280.40625 0.2552873382519156 -12 0.3189849853515625 3 4 VT 2 -1 44.125 0.0 0.0 6.5621 0.0 0.0 0.0 469.2767703957832 469.2767703957832 20.924778212679485 0.0 0.0 0.0 0 0.4119543704721594 1.5228787452803376 0.3807196863200844 0.0 VT 6.5621 - 190 + 1 2.455 84726.7 1.0 1547 4100 5646 HBL1_DMSO_200M_050219_2,5649 HBL1_DMSO_200M_050219_2,5649, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5651 29.093 156.0 515280.0 25 0 79731.0 + 27669 PLHQRMPCL 9 67 547.783633376571 1093.5527138199418 2 547.7830688357353 MULTI CID FTMS 0 0 0 5650 427053.875 1.0 0 0.0 1 Unmodified _PLHQRMPCL_ REV__ENST00000273610.3_1_3:48599595-48600222:-|nuORF 23.1484247019978 0.2366544122328345 4 HP{I|L}E[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}P 8 -1 44.663 0.0 0.0 4.0842 0.0 0.0 0.0 82.06666742496327 82.06666742496327 28.19726012513012 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 HP{I|L}E[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}P 4.0842 - 74 + 1 2.455 68351.1 1.0 1548 4101 5650 HBL1_DMSO_200M_050219_2,5651 HBL1_DMSO_200M_050219_2,5651,PLHQRMPCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5653 29.099 145.0 295330.0 25 0 14736.0 + -1 CLCFAPCIAF 10 76 629.7758864997924 1257.5372200663846 2 629.7764770388603 MULTI CID FTMS 0 0 0 5652 383221.21875 0.0401225784480185 16 -0.3448810577392578 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 18.13498045792455 0.5432546531930572 4 [AG]AHDEAGAQNA{M(Oxidation (M))|F} 13 -1 + 95.004 0.0 0.0 7.5547 7.5547 82.867 0.0 0.0 0.0 8.816244559530546 16.642078980768062 8.816244559530546 3.0102999566398125 0 0.9247425010840048 1.5228787452803376 1.0114393726401687 0.5 [AG]AHDEAGAQNA{M(Oxidation (M))|F};[AG]AHDEAGANQA{M(Oxidation (M))|F};[AG]AHDEAQQNA{M(Oxidation (M))|F};[AG]AHDEAQNQA{M(Oxidation (M))|F};[QA]HDEAGAQNA{M(Oxidation (M))|F};[AG]AHDEAGAQGGA{M(Oxidation (M))|F};[AG]AHDEAGA[AG]NA{M(Oxidation (M))|F};[AG]AHDEQAQNA{M(Oxidation (M))|F};[QA]HDEAGANQA{M(Oxidation (M))|F};[AG]AHDEAGAN[AG]A{M(Oxidation (M))|F} 7.5547;7.3154;7.2659;7.0266;6.8537;6.8333;6.8333;6.7679;6.6143;6.5939 -;-;-;-;-;-;-;-;-;- 3244 1 2.455 36203.4 1.0 1549 4102 5652 HBL1_DMSO_200M_050219_2,5653 HBL1_DMSO_200M_050219_2,5653,CLCFAPCIAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5654 29.112 800.0 73957.0 25 0 11085.0 + -1 SILMQCTSSP 10 91 570.2570864125286 1138.499619891857 2 570.2573730349541 MULTI CID FTMS 0 0 0 5652 98592.5859375 0.6712070476933873 7 -0.1290016174316406 2 Carbamidomethyl (C),Oxidation (M) _SILM(Oxidation (M))QC(Carbamidomethyl (C))TSSP_ REV__ENSG00000160539|ENST00000372264|PLPP7 17.11289562659939 0.5604042439455784 4 {[TV]|[{I|L}S]}{I|L}EYYQ 7 -1 47.223 0.0 0.0 4.1478 0.0 0.0 0.0 239.0579012506469 239.0579012506469 36.76554474077804 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.4247425010840047 {[TV]|[{I|L}S]}{I|L}EYYQ 4.1478 - 48 + 1 2.455 54125.1 0.4900000095367431 1550 4102 5652 HBL1_DMSO_200M_050219_2,5654 HBL1_DMSO_200M_050219_2,5654,SILMQCTSSP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5656 29.117 119.0 732630.0 25 0 76709.0 + 33259 SFPASSGVSH 10 77 488.23034326897925 974.4461336047584 2 488.2304870486259 MULTI CID FTMS 0 0 0 5655 668776.125 0.9076430398034274 -6 0.1520195007324218 1 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 65.23502041540118 0.0228537820337083 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH 10 0 + 90.527 0.0 0.0 9.2901 9.2901 98.329 0.0 0.0 0.0 62.08342832424712 16.53212513775344 16.53212513775344 36.08471912431625 0 0.3807196863200844 2.0 1.4604093769761874 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YV]EPH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YV]{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SAPDT;{[QN]|[E{I|L}]|[KN]}[MN]RPDT;{[QD]|[EN]|[WG]|[KD]|[RS]}{[QN]|[E{I|L}]|[KN]}SAPDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS][HS]S[QP];{[QN]|[E{I|L}]|[KN]}V{M(Oxidation (M))|F}PH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}V{M(Oxidation (M))|F}HP{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 9.2901;5.587;4.8159;3.609;2.9608;2.8326;2.8018;2.1857;1.9127;1.732 +;-;-;-;-;-;-;-;-;- + 310 + 1 2.455 71519.8 1.0 1551 4103 5655 HBL1_DMSO_200M_050219_2,5656 HBL1_DMSO_200M_050219_2,5656,SFPASSGVSH True True SFPASSGVSH 29.117369 488.230487048626 987196912.0 5655.0 MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant;;ENSG00000160294|ENST00000291688|MCM3AP 7.033709367116292 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5658 29.122 24.0 2237500.0 25 0 326150.0 + 26674 NYINQGVSH 9 76 516.2485630749178 1030.4825732166355 2 516.2490722537041 MULTI CID FTMS 0 0 0 5657 2251826.75 0.909870715283307 -1 0.0050258636474609 1 Unmodified _NYINQGVSH_ ENSG00000205339|ENST00000379719|IPO7 71.92227651296345 0.0203558744033348 4 [YN]{I|L}NQVGSH 9 2 + 86.38 0.0 0.0 8.3825 8.3825 82.094 0.0 0.0 0.0 71.40723485800656 14.973024840566469 14.973024840566469 1.7609125905568137 0 0.805462187404089 2.0 0.3494850021680094 0.9247425010840048 [YN]{I|L}NQVGSH;[YN]{I|L}NQGVSH;[YN]{I|L}GGQVGSH;[YN]{I|L}GGQGVSH;[YN]{I|L}N[AG]VGSH;[YN]{I|L}N[AG]GVSH;[YN]{I|L}GG[AG]VGSH;[YN]{I|L}GG[AG]GVSH;[QP]{M(Oxidation (M))|F}[HM]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[CT]|[{M(Oxidation (M))|F}G]}[PA][HM]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 8.3825;8.2116;7.4889;7.318;7.0037;6.8328;5.7022;5.5313;1.4211;0.025503 -;+;-;-;-;-;-;-;-;- + 298 + 1 2.455 46802.3 1.0 1552 4104 5657 HBL1_DMSO_200M_050219_2,5658 HBL1_DMSO_200M_050219_2,5658,NYINQGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5659 29.127 237.0 434650.0 25 0 51146.0 + 27156 PFSGRGGS 8 115 382.6864382153872 763.3583234975745 2 382.6859924197197 MULTI CID FTMS 0 0 0 5657 235940.625 0.811122044103613 -2 0.0243339538574218 2 Unmodified _PFSGRGGS_ REV__ENSG00000182087|ENST00000356663|TMEM259;REV__nc|ENSG00000182087|Q4ZIN3-2|TMEM259 2.889219685676258 0.8067950007271085 4 [{M(Oxidation (M))|F}E]P{M(Oxidation (M))|F}PK 6 -1 + 31.305 0.0 0.0 4.1009 4.1009 74.598 0.0 0.0 0.0 6.478174818886373 6.43581303815245 6.43581303815245 6.43581303815245 0 0.2887254899964357 0.0 0.0 0.1462566630072955 [{M(Oxidation (M))|F}E]P{M(Oxidation (M))|F}PK;[{M(Oxidation (M))|F}E]P{M(Oxidation (M))|F}KP 4.1009;3.2579 -;- 57 + 1 2.455 86950.3 1.0 1553 4104 5657 HBL1_DMSO_200M_050219_2,5659 HBL1_DMSO_200M_050219_2,5659,PFSGRGGS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5660 29.141 800.0 144980.0 25 0 18568.0 + 39162 TYPEESRSY 9 94 566.2508947951986 1130.4872366571972 2 566.2516967654228 MULTI CID FTMS 0 0 0 5657 107014.9765625 0.0415339752523199 -12 0.2824630737304687 3 Unmodified _TYPEESRSY_ ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13 32.78568957990786 0.1150597335874693 4 [YT]PEERSSY 9 2 + 70.896 0.0 0.0 6.2713 6.2713 84.402 0.0 0.0 0.0 7.501225267834002 7.501225267834002 7.501225267834002 7.501225267834002 0 0.3807196863200844 2.0 0.8494850021680094 0.0 [YT]PEERSSY;[EP]EREEP[{M(Oxidation (M))|F}V];[EP]E[VG]EEP[{M(Oxidation (M))|F}V];[YT]P{M(Oxidation (M))|F}G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[{M(Oxidation (M))|F}V];[YT][HM]SRSSY;[YT]P[NG]S[VG]SSY;[YT]PEE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]};[EP]ERS[HM][{M(Oxidation (M))|F}V];[EP]E[VG]S[NG]P[{M(Oxidation (M))|F}V];[YT][WD][{I|L}P]SSY 6.2713;5.6077;4.7932;3.9498;3.7556;3.5228;3.4008;3.0921;2.8592;2.8446 -;-;-;-;-;-;-;-;-;- 300 + 1 2.455 96302.3 0.5099999904632568 1554 4104 5657 HBL1_DMSO_200M_050219_2,5660 HBL1_DMSO_200M_050219_2,5660,TYPEESRSY True True TYPEESRSY 29.140792 566.251696765423 51032364.0 5657.0 ENSG00000123200|ENST00000679008|ZC3H13;;nc|ENSG00000123200|Q5T200|ZC3H13;;nc|ENSG00000123200|Q5T200-2|ZC3H13 8.031431992848715 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5662 29.156 726.0 160730.0 25 0 13852.0 + 17625 KPTAAFHLL 9 118 499.2931674909122 0 499.2932311892509 PEAK CID FTMS 0 0 0 5661 122746.546875 0.2001889769831243 -7 0.1364173889160156 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.2326366549411506 4 PT 2 -1 23.711 0.0 0.0 2.3793 0.0 0.0 128.0944044299635 667.3525397661657 795.4469441961292 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 PT 2.3793 + + 34 + 1 2.455 92545.7 1.0 1555 4105 5661 HBL1_DMSO_200M_050219_2,5662 HBL1_DMSO_200M_050219_2,5662,KPTAAFHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5663 29.17 800.0 221680.0 25 0 33175.0 34652 SPPPPPPPP 9 141 441.7399800073033 881.4654070814066 2 441.7398559451103 MULTI CID FTMS 0 0 0 5661 126766.6796875 0.2513344344083612 -23 0.5170650482177734 2 Unmodified _SPPPPPPPP_ ENSG00000099999|ENST00000382363|RNF215;ENSG00000100312|ENST00000216139|ACR;ENSG00000103479|ENST00000262133|RBL2;ENSG00000107816|ENST00000454422|LZTS2;ENSG00000109920|ENST00000263773|FNBP4;ENSG00000120549|ENST00000376454|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;ENSG00000136754|ENST00000376140|ABI1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000164944|ENST00000297591|VIRMA;ENSG00000184863|ENST00000401878|RBM33;ENSG00000260428|ENST00000567180|SCX;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;nc|ENSG00000109920|Q8N3X1-2|FNBP4;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000015285|ENST00000376701|WAS;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000100201|ENST00000403230|DDX17;REV__ENSG00000107816|ENST00000454422|LZTS2;REV__ENSG00000112541|ENST00000539869|PDE10A;REV__ENSG00000127666|ENST00000248244|TICAM1;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENSG00000141867|ENST00000679869|BRD4;REV__ENSG00000143006|ENST00000371445|DMRTB1;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000204334|ENST00000697325|ERICH2;REV__ENSG00000242265|ENST00000612748|PEG10;REV__ENST00000216019.11_1_22:38881942-38884127:-|nuORF;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF;REV__ENST00000361272.8_2_8:17102747-17104366:-|nuORF;REV__ENST00000431312.2_1_22:38881942-38884127:-|nuORF;REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF;REV__ENST00000482108.1_2_7:94293788-94294991:+|nuORF;REV__ENST00000508096.1_1_10:126605730-126631034:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100201|Q92841-1|DDX17;REV__nc|ENSG00000100201|Q92841-2|DDX17;REV__nc|ENSG00000100201|Q92841-3|DDX17;REV__nc|ENSG00000139218|Q99590-2|SCAF11;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000168066|Q15637-5|SF1;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 120.85680286791232 0.0012173254062244 4 [PS]PPPP[YK] 8 3 + 74.585 0.0 0.0 8.4615 8.4615 93.721 0.0 0.0 0.0 9.687943983952266 6.989700043360202 6.989700043360202 9.687943983952266 0 1.9291746928241125 2.0 1.5328095104469872 0.0 [PS]PPPP[YK];[PS]PPPPPPP;{[HG]|PP}SPPP[YK];[PS]PPPKYP;[PS][YK]P[YK];[PS][YK]PPPP;[PS]PP[YK]PP;[PS]P[YK]PPP;[YK]SPP[YK];[PS]PPPK{M(Oxidation (M))|F}{I|L} 8.4615;7.3624;5.4344;5.3192;5.286;4.9715;4.9316;4.9316;4.5814;4.5101 -;+;-;-;-;-;-;-;-;- + 365 1 2.455 141135.5 0.5299999713897705 1556 4105 5661 HBL1_DMSO_200M_050219_2,5663 HBL1_DMSO_200M_050219_2,5663,SPPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5665 29.175 60.0 894450.0 25 0 43991.0 + 19308 LELFIMGF 8 73 485.2596021747377 968.5046514162756 2 485.2593566775322 MULTI CID FTMS 0 0 0 5664 808383.1875 0.3156270406714047 8 -0.1732101440429687 1 Unmodified _LELFIMGF_ REV__ENSG00000146399|ENST00000275216|TAAR1 20.871210003555333 0.6025813472596342 4 GPHQ{I|L} 5 -1 38.675 0.0 0.0 3.9933 0.0 0.0 418.2253285138688 0.0 418.2253285138688 0.0 25.57591163894547 0.0 0.0 0 0.8497567760783129 0.0 0.0 0.0 GPHQ{I|L} 3.9933 - 312 1 2.455 47248.7 1.0 1557 4106 5664 HBL1_DMSO_200M_050219_2,5665 HBL1_DMSO_200M_050219_2,5665,LELFIMGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5666 29.177 103.0 546780.0 25 0 42757.0 -1 DAEMTTRMV 9 97 535.2364099885674 1068.4582670439347 2 535.2371093630791 MULTI CID FTMS 0 0 0 5664 414577.96875 0.1285888381376425 -12 0.2634963989257812 2 Oxidation (M) _DAEMTTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 31.26834338654808 0.1333407332142048 4 {[DA]|[EG]}EMTTR[{M(Oxidation (M))|F}V] 9 -1 + 56.092 0.0 0.0 5.2498 5.2498 78.61 0.0 0.0 0.0 32.53591878376909 2.243012119929091 2.243012119929091 5.964467979859336 0 0.5 2.0 0.0 0.0 {[DA]|[EG]}EMTTR[{M(Oxidation (M))|F}V];{[DA]|[EG]}EMS[RP]TY;WE[W{M(Oxidation (M))|F}]R[{M(Oxidation (M))|F}V];[YT]RT[PA]E[EC];[QP]Q[PA][PA]E[EC] 5.2498;4.6916;2.4535;1.1551;0.056894 +;-;-;-;- + 209 + 1 2.455 46481.2 1.0 1558 4106 5664 HBL1_DMSO_200M_050219_2,5666 HBL1_DMSO_200M_050219_2,5666,DAEMTTRMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5667 29.191 800.0 87702.0 25 0 12897.0 + -1 NQMPTQPQV 9 108 529.7504745442529 1057.4863961553058 2 529.7504150271416 MULTI CID FTMS 0 0 0 5664 88844.2109375 0.9799434062352756 -3 0.0573749542236328 3 Oxidation (M) _NQM(Oxidation (M))PTQPQV_ EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;ENSG00000100393|ENST00000263253|EP300 32.30548876998284 0.1201446275138228 4 [AG]N{[WT]|[RM]}WPQV 9 -1 [AG]N{[WT]|[RM]}W + + 16.749 7.5744 1.0589 1.5838 1.5838 44.357 0.0 0.0 0.0 0.0 4.077482560465402 0.0 0.0 0 0.5 0.0 0.0 0.7134679910804405 [AG]N{[WT]|[RM]}WPQV 1.5838 - 121 + 1 2.455 60893.0 0.4900000095367431 1559 4106 5664 HBL1_DMSO_200M_050219_2,5667 HBL1_DMSO_200M_050219_2,5667,NQMPTQPQV False False NQMPTQPQV 29.190909 529.750415027142 1536359.75 5664.0 EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;;ENSG00000100393|ENST00000263253|EP300 7.217717965443929 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5669 29.196 25.0 1548100.0 25 0 117610.0 + -1 TVHADNFCD 9 72 539.7178392183204 1077.4211255034406 2 539.7184936404228 MULTI CID FTMS 0 0 0 5668 2083798.75 0.8366913130988264 1 -0.0076808929443359 1 Carbamidomethyl (C) _TVHADNFC(Carbamidomethyl (C))D_ REV__ENSG00000188994|ENST00000369577|ZNF292;REV__nc|ENSG00000188994|O60281-2|ZNF292;REV__ZNF292|p.D2051Tfs*9|1|0.79|ENSG00000188994|chr6:87259779-87259779|T/-|frameshift_variant 10.823927491677226 0.5436922275383211 4 VQS 3 -1 32.435 0.0 0.0 3.0104 0.0 0.0 440.1392690076986 320.09992395572505 760.2391929634236 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.1989700043360187 0.0 VQS 3.0104 - 110 + 1 2.455 36242.8 1.0 1560 4107 5668 HBL1_DMSO_200M_050219_2,5669 HBL1_DMSO_200M_050219_2,5669,TVHADNFCD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5670 29.199 145.0 472150.0 25 0 60790.0 -1 LPPPPPPAM 9 98 466.74926325411946 931.4839735750388 2 466.7492248415947 MULTI CID FTMS 0 0 0 5668 477708.21875 0.7729376464680112 -7 0.1278514862060547 2 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 79.93452657146344 0.0175326119056068 4 [{I|L}P]PPPP[WE] 8 -1 + 48.522 0.0 0.0 5.2091 5.2091 85.53 0.0 0.0 0.0 6.0071123335628585 14.419628234359571 6.0071123335628585 16.962724883926654 0 1.566901560044258 1.6989700043360187 0.0 0.0 [{I|L}P]PPPP[WE];[YK]APPP{I|L}{M(Oxidation (M))|F};{[HG]|PP}PAPPP{I|L}{M(Oxidation (M))|F};{[HG]|PP}{I|L}PPP[WE];[{I|L}P][YK]P[WE];[YK]{I|L}PP[WE];{[HG]|PP}P{I|L}PP[WE];{[HG]|PP}APPPP{I|L}{M(Oxidation (M))|F};[YK]PAPP{I|L}{M(Oxidation (M))|F};{[HG]|PP}PPAPP{I|L}{M(Oxidation (M))|F} 5.2091;3.3881;3.3332;3.147;3.0873;3.0387;2.9765;2.8759;2.7418;2.6868 -;-;-;-;-;-;-;-;-;- 478 1 2.455 57205.6 1.0 1561 4107 5668 HBL1_DMSO_200M_050219_2,5670 HBL1_DMSO_200M_050219_2,5670,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5672 29.204 153.0 477840.0 25 0 77191.0 + 36692 TDAPTSPRV 9 98 472.2456070641282 942.4766611950564 2 472.2457763552666 MULTI CID FTMS 0 0 0 5671 304866.4375 0.5952886062307282 9 -0.2320423126220703 1 Unmodified _TDAPTSPRV_ ENSG00000105063|ENST00000412770|PPP6R1 31.26834338654808 0.1333407332142048 4 {[ES]|[DT]|[{I|L}C]}APTS 6 3 33.02 0.0 0.0 3.5036 0.0 0.0 0.0 367.21042810611567 367.21042810611567 22.64645333192 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 + {[ES]|[DT]|[{I|L}C]}APTS 3.5036 + + 105 + 1 2.455 59391.8 1.0 1562 4108 5671 HBL1_DMSO_200M_050219_2,5672 HBL1_DMSO_200M_050219_2,5672,TDAPTSPRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5673 29.208 213.0 343910.0 25 0 122090.0 12274 GRGMVGKV 8 80 402.2309330870601 0 402.2304260134697 PEAK CID FTMS 0 0 0 5671 198550.921875 0.9327125505597408 4 -0.0604305267333984 2 Unmodified _GRGMVGKV_ ENST00000494293.1_1_1:26146491-26149675:+|nuORF 2.577480529830294 0.5910327097116076 4 K 1 7 3.0989 0.0 0.0 0.38619 0.0 0.0 546.3408506938484 124.98832117252188 671.3291718663703 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.38619 + + 7 + 1 2.455 60625.9 1.0 1563 4108 5671 HBL1_DMSO_200M_050219_2,5673 HBL1_DMSO_200M_050219_2,5673,GRGMVGKV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5674 29.222 800.0 165740.0 25 0 35162.0 + 3337 AYMPPTSEA 9 139 491.7129692273722 981.4113855215444 2 491.7136718630791 MULTI CID FTMS 0 0 0 5671 103852.2421875 0.1734359837660911 10 -0.2393360137939453 3 Oxidation (M) _AYM(Oxidation (M))PPTSEA_ ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP 53.57557251787612 0.0325303259649373 4 [TP]PS{[MS]|[{M(Oxidation (M))|F}A]}Y{[CP]|[EA]} 9 6 + 33.705 0.0 0.0 3.4344 3.4344 72.619 0.0 0.0 0.0 6.449881918697731 6.802331676426327 6.449881918697731 6.449881918697731 0 0.7134679910804405 0.4559319556497244 1.2302046884880935 0.0 [TP]PS{[MS]|[{M(Oxidation (M))|F}A]}Y{[CP]|[EA]};{[HG]|PP}TS{[MS]|[{M(Oxidation (M))|F}A]}Y{[CP]|[EA]};[PA]VD{[MS]|[{M(Oxidation (M))|F}A]}Y{[CP]|[EA]};[{I|L}P]GD{[MS]|[{M(Oxidation (M))|F}A]}Y{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}Y[WH]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[TP]PSE{M(Oxidation (M))|F}S{[MS]|[{M(Oxidation (M))|F}A]};{[MS]|[{M(Oxidation (M))|F}A]}{[ES]|[DT]|[{I|L}C]}{[QN]|[E{I|L}]|[KN]}SEA;[PA]V[W{M(Oxidation (M))|F}]Y{[CP]|[EA]};[PG]{I|L}D{[MS]|[{M(Oxidation (M))|F}A]}Y{[CP]|[EA]};[{I|L}P]G[W{M(Oxidation (M))|F}]Y{[CP]|[EA]} 3.4344;2.7772;2.1918;2.0757;1.771;1.6395;1.3256;1.3245;1.2716;1.2084 -;-;-;-;-;-;-;-;-;- 666 1 2.455 101135.0 0.5099999904632568 1564 4108 5671 HBL1_DMSO_200M_050219_2,5674 HBL1_DMSO_200M_050219_2,5674,AYMPPTSEA True False AYMPPTSEA 29.222015 491.713671863079 8829522.0 5671.0 nc|ENSG00000231925|O15533-4|TAPBP;;nc|ENSG00000231925|O15533-3|TAPBP;;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;;nc|ENSG00000231925|O15533-2|TAPBP;;ENSG00000231925|ENST00000434618|TAPBP 6.420195738474528 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5676 29.237 656.0 141300.0 25 0 6605.0 + 28915 QAPPPPQQV 9 119 481.2586875982422 960.5028222632844 2 481.2587768435478 MULTI CID FTMS 0 0 0 5675 118360.9375 0.0200445677340054 163 -5.191226959228516 1 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 58.6788170122104 0.0268135626297836 4 [QA]PPPPQ{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 50.341 0.0 0.0 5.2411 5.2411 82.533 0.0 0.0 0.0 17.62308915409546 7.147642715192504 7.147642715192504 9.208187539523747 0 1.1382104921644451 1.5228787452803376 0.0 0.7689301784845296 + + [QA]PPPPQ{[QV]|[N{I|L}]|[RA]|[KV]};[QA]PPPP[AG]{[QV]|[N{I|L}]|[RA]|[KV]};[PG]APAPPQ{[QV]|[N{I|L}]|[RA]|[KV]};[QP]PAPPQ{[QV]|[N{I|L}]|[RA]|[KV]};[QA]P[YK]Q{[QV]|[N{I|L}]|[RA]|[KV]};[PG]APPPAQ{[QV]|[N{I|L}]|[RA]|[KV]};[QP]APPPQ{[QV]|[N{I|L}]|[RA]|[KV]};{[HG]|PP}QAPPQ{[QV]|[N{I|L}]|[RA]|[KV]};[PG]AAPPPQ{[QV]|[N{I|L}]|[RA]|[KV]};[QP]PPPAQ{[QV]|[N{I|L}]|[RA]|[KV]} 5.2411;4.2824;3.4063;3.2794;3.1079;3.0983;2.9912;2.9298;2.7795;2.7316 +;-;-;-;-;-;-;-;-;- + 525 1 2.457 76220.4 1.0 1565 4109 5675 HBL1_DMSO_200M_050219_2,5676 HBL1_DMSO_200M_050219_2,5676,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5677 29.251 800.0 180250.0 25 0 22570.0 + 43125 VYPERSTSY 9 121 551.2641634404746 1100.513773947749 2 551.2643920779228 MULTI CID FTMS 0 0 0 5675 146128.328125 0.0470467403347913 -20 0.473245620727539 2 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 34.40172386719151 0.1061884637610825 4 VYPE{[ET]|[MV]}R 7 4 59.301 0.0 0.0 5.3885 0.0 0.0 0.0 223.07268701724848 223.07268701724848 43.81691345950685 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.6861818737241735 VYPE{[ET]|[MV]}R 5.3885 - 305 + 1 2.457 115517.9 0.6100000143051147 1566 4109 5675 HBL1_DMSO_200M_050219_2,5677 HBL1_DMSO_200M_050219_2,5677,VYPERSTSY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5681 29.275 800.0 86393.0 25 0 3841.9 + 3647 DAEMTTRMV 9 116 543.2334935379079 1084.4524341426156 2 543.2325317263603 MULTI CID FTMS 0 0 0 5680 84259.1015625 0.4455679249543718 -6 0.0892925262451171 1 2 Oxidation (M) _DAEM(Oxidation (M))TTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 41.95555342248728 0.0647214845423414 4 {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V 9 0 + 63.33 0.0 0.0 5.8398 5.8398 79.648 0.0 0.0 0.0 20.061668675368622 4.678153166285988 4.678153166285988 4.678153166285988 0 1.3494850021680094 2.0 0.3494850021680094 0.0 + + {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V;{[DA]|[EG]}E{M(Oxidation (M))|F}TTRV{M(Oxidation (M))|F};{[DA]|[EG]}E{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[ET]|[MV]}V;{[DA]|[EG]}E[YQ]M{[ET]|[MV]}V;{[DA]|[EG]}E[YR]C{[ET]|[MV]}V;WE[YQ][DV]{M(Oxidation (M))|F}V;{[SA]|[TG]}V{[RE]|[WV]}YE[EC];WE[YQ][DV]V{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}E{[RE]|[WV]}R{M(Oxidation (M))|F}V;WE[YQ]VVD{M(Oxidation (M))|F} 5.8398;5.4085;4.2097;3.4227;3.1081;2.155;1.835;1.7236;1.6728;1.446 +;-;-;-;-;-;-;-;-;- + 360 + 1 2.457 59912.6 0.550000011920929 1567 4112 5680 HBL1_DMSO_200M_050219_2,5681 HBL1_DMSO_200M_050219_2,5681,DAEMTTRMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5682 29.279 185.0 606830.0 25 0 57023.0 + 44876 YPPHVQKV 8 120 323.1838573595554 966.5297426788665 3 323.1834289431572 MULTI CID FTMS 0 0 0 5680 258128.515625 0.6734588743589897 176 -5.661054611206055 2 Unmodified _YPPHVQKV_ ENSG00000112701|ENST00000447266|SENP6;nc|ENSG00000112701|Q9GZR1-2|SENP6 15.847184025352805 0.6768015514314958 4 YPPHVQKV 8 0 + 55.126 0.0 0.0 5.7035 5.7035 72.24 0.0 0.0 0.0 28.62826806974688 0.78628829289854 0.78628829289854 0.78628829289854 0 0.0 1.2218487496163564 0.0 0.0 + + YPPHVQKV;YPPHVQVK;YPPHV[AG]KV;YPPHV[AG]VK 5.7035;5.6221;4.7452;4.6638 +;-;-;- + 204 + 1 2.457 94566.3 1.0 1568 4112 5680 HBL1_DMSO_200M_050219_2,5682 HBL1_DMSO_200M_050219_2,5682,YPPHVQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5683 29.293 800.0 300010.0 25 0 104200.0 -1 0 132 470.25675038547536 469.24947391887537 1 470.2560607790947 MULTI CID FTMS 0 0 0 5680 152558.234375 0.2393549757073892 -20 0.4241046905517578 3 4 [PA]GAP 5 -1 20.891 0.0 0.0 4.4519 0.0 0.0 0.0 73.02596863006599 73.02596863006599 6.180540824916395 0.0 0.0 0.0 0 0.0 0.619788758288394 0.0 0.0 [PA]GAP 4.4519 - 158 1 2.457 187371.4 0.6100000143051147 1569 4112 5680 HBL1_DMSO_200M_050219_2,5683 HBL1_DMSO_200M_050219_2,5683, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5684 29.307 800.0 208290.0 25 0 57839.0 + 13066 HDDLAGSY 8 119 439.1878859904544 876.3612190477088 2 439.1881591677666 MULTI CID FTMS 0 0 0 5680 90422.3515625 1.0 0 0.0 4 Unmodified _HDDLAGSY_ ENST00000397292.7_1_9:26928180-26928324:-|nuORF 30.22481116460888 0.4082965392918993 4 [HD]D{I|L}QSY 7 2 + 38.482 0.0 0.0 4.3912 4.3912 75.091 0.0 0.0 0.0 11.276202523714772 14.1684977723439 11.276202523714772 5.897554856604174 0 0.8182503180159344 0.9208187539523752 0.2887254899964357 0.0 [HD]D{I|L}QSY;[HD]{I|L}DQSY;[HD]D{I|L}[AG]SY;[HD]{I|L}D[AG]SY;[HM]Q{[QG]|[NA]}NY;[HM][AG]{[QG]|[NA]}NY;[HM]Q{[QG]|[NA]}GGY;[WH]P{[MG]|[TS]}SY 4.3912;3.7182;3.3265;2.6535;2.2184;1.1538;1.1538;0.16912 -;-;+;-;-;-;-;- + 119 1 2.457 133498.0 0.5 1570 4112 5680 HBL1_DMSO_200M_050219_2,5684 HBL1_DMSO_200M_050219_2,5684,HDDLAGSY False True HDDLAGSY 29.306604 439.188159167767 466369.75 5680.0 ENST00000397292.7_1_9:26928180-26928324:-|nuORF 2.8815887769063315 2.0 True 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5686 29.311 12.0 3924300.0 25 0 357230.0 + 39488 VARPSSGTTI 10 75 494.7748639577574 987.5351749823149 2 494.7749816775322 MULTI CID FTMS 0 0 0 5685 5011712.0 0.9837746374919764 -1 0.0475978851318359 1 Unmodified _VARPSSGTTI_ ENST00000381140.8_3_13:27998935-28001286:+|nuORF;ENST00000466776.5_1_13:27998904-28001286:+|nuORF 45.739877483867886 0.1051543674217965 4 {[VA]|[{I|L}G]}R[PS]SGTT{I|L} 10 0 + 61.163 0.0 0.0 6.1935 6.1935 87.794 0.0 0.0 0.0 10.311672978144166 15.026975159433531 10.311672978144166 10.311672978144166 0 1.3494850021680094 0.958607314841775 1.0 0.0 + + {[VA]|[{I|L}G]}R[PS]SGTT{I|L};[PS]{I|L}{[NV]|[RG]}SGTT{I|L};[PS]{[NV]|[RG]}{I|L}SGTT{I|L};{[VA]|[{I|L}G]}R[RD]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};[PS]{[NV]|[RG]}[KT]ET{I|L};[PS]{[NV]|[RG]}[KT]TE{I|L} 6.1935;5.1493;4.6662;3.0575;2.2843;1.0934 +;-;-;-;-;- + 185 1 2.457 43386.7 1.0 1571 4113 5685 HBL1_DMSO_200M_050219_2,5686 HBL1_DMSO_200M_050219_2,5686,VARPSSGTTI True True VARPSSGTTI 29.311416 494.774981677532 97523334.0 5685.0 ENST00000381140.8_3_13:27998935-28001286:+|nuORF;;ENST00000466776.5_1_13:27998904-28001286:+|nuORF 6.852753321329753 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5687 29.315 204.0 265480.0 25 0 29866.0 + 4868 DGAPPSNQI 9 96 449.7169891694584 897.4194254057168 2 449.7168456912041 MULTI CID FTMS 0 0 0 5685 326334.90625 0.8294171572245201 32 -0.8491687774658203 2 Unmodified _DGAPPSNQI_ ENSG00000112245|ENST00000626021|PTP4A1 52.268347100219714 0.0353964759249114 4 [DG]AP 4 5 40.203 0.0 0.0 4.4798 0.0 0.0 0.0 554.258328564173 554.258328564173 25.598943791441968 0.0 0.0 0.0 0 0.8494850021680094 1.3010299956639813 0.25 0.0 + [DG]AP 4.4798 + + 238 1 2.457 48367.5 1.0 1572 4113 5685 HBL1_DMSO_200M_050219_2,5687 HBL1_DMSO_200M_050219_2,5687,DGAPPSNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5688 29.329 800.0 189540.0 25 0 19263.0 + 22721 LQHKGGGL 8 148 405.2354105212651 808.4562681093303 2 405.2352477908134 MULTI CID FTMS 0 0 0 5685 90331.109375 0.4443191435660625 -6 0.1157093048095703 3 Unmodified _LQHKGGGL_ REV__ENSG00000159208|ENST00000290363|CIART;REV__ENST00000469255.5_1_1:150256006-150257127:+|nuORF 9.347437153973935 0.7675937258251505 4 WS{I|L} 3 -1 30.42 0.0 0.0 3.7627 0.0 0.0 404.2383900373063 0.0 404.2383900373063 0.0 1.0674973968913406 0.0 0.0 0 0.8252574989159953 0.0 0.3494850021680094 0.0 WS{I|L} 3.7627 - 81 1 2.457 120733.9 0.4300000071525574 1573 4113 5685 HBL1_DMSO_200M_050219_2,5688 HBL1_DMSO_200M_050219_2,5688,LQHKGGGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5689 29.343 800.0 162070.0 25 0 16069.0 + 7414 EGLGSARGGQL 11 149 522.7748496275655 1043.5351463219308 2 522.7757446169853 MULTI CID FTMS 0 0 0 5685 85345.59375 0.0119720488726089 -9 0.189239501953125 4 Unmodified _EGLGSARGGQL_ REV__ENSG00000165458|ENST00000298229|INPPL1;REV__nc|ENSG00000165458|O15357-2|INPPL1 128.57297698046145 0.0503931262756423 4 {[DA]|[EG]}{I|L}RQSGGQ{I|L} 10 -1 + 102.04 0.0 0.0 9.7779 9.7779 92.907 0.0 0.0 0.0 19.27317490243957 66.20339769570353 19.27317490243957 9.151355113598129 0 1.3737125054200234 2.0 0.9634679910804403 0.8979400086720376 {[DA]|[EG]}{I|L}RQSGGQ{I|L};{[DA]|[EG]}{I|L}RQSNQ{I|L};{[DA]|[EG]}{I|L}RQSGG[AG]{I|L};{[DA]|[EG]}{I|L}R[AG]SGGQ{I|L};{[DA]|[EG]}{I|L}G[WK]GGQ{I|L};{[DA]|[EG]}{I|L}R[AG]SGG[AG]{I|L};{[DA]|[EG]}{I|L}RQSN[AG]{I|L};{[DA]|[EG]}{I|L}R[AG]SNQ{I|L};{[DA]|[EG]}{I|L}G[WK]NQ{I|L};{[DA]|[EG]}{I|L}G[WK]GG[AG]{I|L} 9.7779;8.901;8.8997;8.8997;8.5311;8.025;8.0186;8.0186;7.6541;7.6529 -;-;-;-;-;-;-;-;-;- 6636 1 2.457 101421.6 0.4799999892711639 1574 4113 5685 HBL1_DMSO_200M_050219_2,5689 HBL1_DMSO_200M_050219_2,5689,EGLGSARGGQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5691 29.348 83.0 778810.0 25 0 208670.0 -1 0 87 337.21569882883205 672.4168447244641 2 337.2154724001884 MULTI CID FTMS 0 0 0 5690 636788.6875 0.7516357671017917 2 -0.0575103759765625 1 4 VTK 3 -1 41.925 0.0 0.0 6.2349 0.0 0.0 0.0 341.18390833072505 341.18390833072505 24.300150061873108 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 VTK 6.2349 - 171 + 1 2.457 56725.4 1.0 1575 4114 5690 HBL1_DMSO_200M_050219_2,5691 HBL1_DMSO_200M_050219_2,5691, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5692 29.353 298.0 308790.0 25 0 40295.0 + -1 LPAVILFM 8 89 460.2715386827952 918.5285244323904 2 460.2715026736259 MULTI CID FTMS 0 0 0 5690 182737.265625 0.7843631119226538 1 -0.0507926940917968 2 Oxidation (M) _LPAVILFM(Oxidation (M))_ REV__ENSG00000182150|ENST00000653738|ERCC6L2;REV__nc|ENSG00000182150|Q5T890-2|ERCC6L2 32.45364647766026 0.3613649037604678 4 {I|L}PAPP 5 -1 59.693 0.0 0.0 6.4987 0.0 0.0 0.0 440.2255037897094 440.2255037897094 44.49092531119419 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 {I|L}PAPP 6.4987 - 188 + 1 2.457 76565.3 1.0 1576 4114 5690 HBL1_DMSO_200M_050219_2,5692 HBL1_DMSO_200M_050219_2,5692,LPAVILFM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5693 29.366 743.0 123030.0 25 0 19335.0 + 3820 DAIRSNNI 8 120 451.7386959084263 901.4628388836526 2 451.7386047244072 MULTI CID FTMS 0 0 0 5690 109694.265625 0.9201902185880592 -3 0.087747573852539 3 Unmodified _DAIRSNNI_ ENSG00000125124|ENST00000245157|BBS2 56.17704186161178 0.1143274477948619 4 {[DA]|[EG]}{I|L}REW{I|L} 7 3 + 38.21 0.0 0.0 4.2386 4.2386 69.56 0.0 0.0 0.0 7.621119296336111 9.106829096975275 7.621119296336111 2.569619513137056 0 1.079689690656103 2.0 0.0 0.0 {[DA]|[EG]}{I|L}REW{I|L};{[DA]|[EG]}{I|L}R[NS]N{I|L};[PS][C(Carbamidomethyl (C))K]{I|L}AN{I|L};{[SA]|[TG]}[WQ]{I|L}AN{I|L};[PS][C(Carbamidomethyl (C))K]{I|L}AGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}AREW{I|L};[VG][W{I|L}]EW{I|L};{NN|[MP]|[D{I|L}]|[EV]}AR[NS]N{I|L};{[SA]|[TG]}[WQ]{I|L}AGG{I|L};[KP][C(Carbamidomethyl (C))S]{I|L}AN{I|L} 4.2386;3.9536;3.3932;2.9342;2.3657;2.2524;2.0708;1.9674;1.9067;1.8425 -;+;-;-;-;-;-;-;-;- + 283 1 2.457 75536.0 1.0 1577 4114 5690 HBL1_DMSO_200M_050219_2,5693 HBL1_DMSO_200M_050219_2,5693,DAIRSNNI True True DAIRSNNI 29.366054 451.7385 691712.4375 5690.0 ENSG00000125124|ENST00000245157|BBS2 2.5590473810831704 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5694 29.38 800.0 110670.0 25 0 16507.0 1501 ALGSVPGG 8 84 657.3568459474994 656.3495694808994 1 657.3564941287041 MULTI CID FTMS 0 0 0 5690 95382.9296875 0.7606356785729149 1 -0.0507926940917968 4 Unmodified _ALGSVPGG_ ENSG00000196498|ENST00000405201|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;nc|ENSG00000196498|Q9Y618-5|NCOR2 24.67388899826682 0.525179942228231 4 [DP]VQ{I|L} 5 7 56.555 0.0 0.0 8.6165 0.0 0.0 0.0 101.0361992990801 101.0361992990801 4.167184309669878 0.0 0.0 0.0 0 0.9802046884880938 1.3979400086720375 0.75 0.3054621874040891 [DP]VQ{I|L} 8.6165 - 383 1 2.457 67522.9 0.4600000083446502 1578 4114 5690 HBL1_DMSO_200M_050219_2,5694 HBL1_DMSO_200M_050219_2,5694,ALGSVPGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5695 29.394 800.0 243730.0 25 0 36279.0 -1 0 87 952.951148483894 1903.887744034588 2 953.4511596560478 MULTI CID FTMS 0 0 0 5690 92232.5234375 0.0343644779596262 -10 0.2255592346191406 5 4 {[VA]|[{I|L}G]}V[QT]VNKVR 10 -1 31.088 0.0 0.0 1.6329 0.0 0.0 0.0 806.2320793219507 806.2320793219507 10.9232929158161 0.0 0.0 0.0 0 0.0 1.154901959985743 0.6747425010840047 0.9361818737241734 {[VA]|[{I|L}G]}V[QT]VNKVR 1.6329 - 156 1 2.457 136705.8 0.4399999976158142 1579 4114 5690 HBL1_DMSO_200M_050219_2,5695 HBL1_DMSO_200M_050219_2,5695, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5697 29.399 24.0 2521900.0 25 0 367010.0 + 39163 TYPEESRSY 9 54 566.2508947951986 1130.4872366571972 2 566.2515136599541 MULTI CID FTMS 0 0 0 5696 2350576.5 0.9122908710134298 -1 0.0507926940917968 1 Unmodified _TYPEESRSY_ ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13 21.53697664764585 0.2571576504437394 4 [EP]EREEP[{M(Oxidation (M))|F}V] 9 7 + 63.082 0.0 0.0 5.5801 5.5801 83.951 0.0 0.0 0.0 1.7517364849543782 56.09243748081781 1.7517364849543782 9.208187539523747 0 0.3494850021680094 1.6989700043360187 0.8494850021680094 0.0 [EP]EREEP[{M(Oxidation (M))|F}V];[EP]E[VG]EEP[{M(Oxidation (M))|F}V];[YT]PEE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]};[YT]PE{[ES]|[DT]|[{I|L}C]}{[MG]|[TS]}{[MS]|[{M(Oxidation (M))|F}A]};[YT]P{M(Oxidation (M))|F}[TP]{[MG]|[TS]}{[MS]|[{M(Oxidation (M))|F}A]} 5.5801;4.7656;3.3732;2.5587;1.9167 -;-;-;-;- 84 1 2.457 54190.1 1.0 1580 4115 5696 HBL1_DMSO_200M_050219_2,5697 HBL1_DMSO_200M_050219_2,5697,TYPEESRSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5698 29.4 87.0 860990.0 25 0 87252.0 + 33260 SFPASSGVSH 10 72 488.23034326897925 974.4461336047584 2 488.2305175662041 MULTI CID FTMS 0 0 0 5696 655134.0 0.8891283540341376 6 -0.1600608825683593 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 68.08070601005525 0.0189984391031388 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 75.213 0.0 0.0 7.7186 7.7186 95.746 0.0 0.0 0.0 36.31991147094716 14.146518864155126 14.146518864155126 29.53447425662482 0 0.3494850021680094 2.0 1.7104093769761877 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS]S[QP]SH;[PA]S[KS]DH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[PA]S[SG]VSH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[PA]S[DP]SAP{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}V]PH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[PA]S[SG][EP]P{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}VHP{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 7.7186;4.6877;4.4749;3.4008;2.6835;2.6547;1.8556;1.3059;1.2665;1.0611 +;-;-;-;-;-;-;-;-;- + 270 + 1 2.457 62491.5 1.0 1581 4115 5696 HBL1_DMSO_200M_050219_2,5698 HBL1_DMSO_200M_050219_2,5698,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5700 29.417 800.0 186720.0 25 0 18018.0 + 13578 HPLEDRNTI 9 117 547.783633376571 1093.5527138199418 2 547.7831298708916 MULTI CID FTMS 0 0 0 5699 169550.28125 0.3970231654027258 15 -0.3327312469482422 1 Unmodified _HPLEDRNTI_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 18.373094154950223 0.3393451798331396 4 HP{I|L}E[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}P 8 5 50.623 0.0 0.0 4.6292 0.0 0.0 0.0 82.06676660709218 82.06676660709218 34.78514482685948 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.4247425010840047 0.0 HP{I|L}E[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}P 4.6292 - 139 + 1 2.457 118136.0 0.6800000071525574 1582 4116 5699 HBL1_DMSO_200M_050219_2,5700 HBL1_DMSO_200M_050219_2,5700,HPLEDRNTI False True HPLEDRNTI 29.416832 547.783129870892 15450192.0 5699.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 5.776548147201538 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5701 29.431 800.0 166180.0 25 0 16114.0 + 26675 NYINQGVSH 9 136 516.2485630749178 1030.4825732166355 2 516.2479736208916 MULTI CID FTMS 0 0 0 5699 170197.109375 0.0687696625178568 11 -0.2708263397216797 2 Unmodified _NYINQGVSH_ ENSG00000205339|ENST00000379719|IPO7 115.6920309560759 0.0032017028976397 4 [YN]{I|L}NQVGSH 9 2 + 89.813 0.0 0.0 8.7156 8.7156 82.565 0.0 0.0 0.0 65.28795963064049 14.973024840566469 14.973024840566469 1.7609125905568137 0 0.805462187404089 2.0 1.117514149585333 1.1989700043360187 [YN]{I|L}NQVGSH;[YN]{I|L}NQGVSH;[YN]{I|L}GGQVGSH;[YN]{I|L}NN{I|L}GSH;[YN]{I|L}GGQGVSH;[YN]{I|L}NNAVSH;[YN]{I|L}N[AG]VGSH;[YN]{I|L}N[AG]GVSH;[YN]{I|L}GGN{I|L}GSH;[YN]{I|L}GGNAVSH 8.7156;8.5448;7.8221;7.8048;7.6512;7.6339;7.4829;7.312;6.9112;6.7403 -;+;-;-;-;-;-;-;-;- + 1372 + 1 2.457 106458.1 0.6600000262260437 1583 4116 5699 HBL1_DMSO_200M_050219_2,5701 HBL1_DMSO_200M_050219_2,5701,NYINQGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5703 29.435 18.0 2742900.0 25 0 308070.0 + -1 DAEMTTRMV 9 67 535.2364099885674 1068.4582670439347 2 535.2366210818291 MULTI CID FTMS 0 0 0 5702 3118935.5 0.9673941270456068 -1 0.0301837921142578 1 Oxidation (M) _DAEMTTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 34.93206674587334 0.1032771302489716 4 {[DA]|[EG]}EMTTR[{M(Oxidation (M))|F}V] 9 -1 + 68.918 0.0 0.0 6.4503 6.4503 91.854 0.0 0.0 0.0 36.25447181216778 0.7378621416091846 0.7378621416091846 29.87765543582988 0 1.305462187404089 2.0 0.0 0.0 {[DA]|[EG]}EMTTR[{M(Oxidation (M))|F}V];WE[W{M(Oxidation (M))|F}]R[{M(Oxidation (M))|F}V];{[DA]|[EG]}[YR][{I|L}A]E[EC];[YT]RT[PA]E[EC] 6.4503;3.6539;2.7339;2.5961 +;-;-;- + 122 + 1 2.457 45709.3 1.0 1584 4117 5702 HBL1_DMSO_200M_050219_2,5703 HBL1_DMSO_200M_050219_2,5703,DAEMTTRMV False False DAEMTTRMV 29.43543 535.236621081829 70697118.0 5702.0 ENSG00000205220|ENST00000358514|PSMB10 7.62515926361084 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5704 29.438 126.0 644640.0 25 0 118490.0 + 34653 SPPPPPPPP 9 94 441.7399800073033 881.4654070814066 2 441.7397033572197 MULTI CID FTMS 0 0 0 5702 489841.96875 0.9711870222424012 -11 0.260904312133789 2 Unmodified _SPPPPPPPP_ ENSG00000103479|ENST00000262133|RBL2;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENSG00000099999|ENST00000382363|RNF215;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000136754|Q8IZP0-8|ABI1;ENSG00000100312|ENST00000216139|ACR;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;ENSG00000139800|ENST00000267294|ZIC5;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000164944|Q69YN4-4|VIRMA;ENSG00000109920|ENST00000263773|FNBP4;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000260428|ENST00000567180|SCX;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000109920|Q8N3X1-2|FNBP4;ENSG00000274209|ENST00000620264|ANTXRL;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000136754|ENST00000376140|ABI1;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;ENSG00000107816|ENST00000454422|LZTS2;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;ENSG00000184863|ENST00000401878|RBM33;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217;nc|ENSG00000136754|Q8IZP0-12|ABI1 93.88341677533236 0.0134066622201488 4 [PS]PPPP[YK] 8 3 + 69.148 0.0 0.0 7.8447 7.8447 95.489 0.0 0.0 0.0 20.66946789630613 56.67403451429223 20.66946789630613 23.010299956639813 0 1.3494850021680094 2.0 1.4049471895720984 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[PS][YK]P[YK];[YK]SPP[YK];{[HG]|PP}PSPP[YK];[YK]PSP[YK];[PS]P[YK][YK];{[HG]|PP}PPSP[YK];[YK]PPS[YK];{[HG]|PP}PPPS[YK] 7.8447;5.2342;5.1315;5.0433;4.8877;3.6237;3.6026;3.4681;1.8141;1.6585 -;-;-;-;-;-;-;-;-;- 159 1 2.457 68724.3 1.0 1585 4117 5702 HBL1_DMSO_200M_050219_2,5704 HBL1_DMSO_200M_050219_2,5704,SPPPPPPPP False False SPPPPPPPP 29.438013 441.73970335722 23887291.5 5702.0 ENSG00000103479|ENST00000262133|RBL2;;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;;ENSG00000099999|ENST00000382363|RNF215;;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;;nc|ENSG00000136754|Q8IZP0-8|ABI1;;ENSG00000100312|ENST00000216139|ACR;;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;;nc|ENSG00000136754|Q8IZP0-7|ABI1;;nc|ENSG00000136754|Q8IZP0-10|ABI1;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000136754|Q8IZP0-11|ABI1;;nc|ENSG00000136754|Q8IZP0-3|ABI1;;ENSG00000139800|ENST00000267294|ZIC5;;nc|ENSG00000136754|Q8IZP0-5|ABI1;;nc|ENSG00000164944|Q69YN4-4|VIRMA;;ENSG00000109920|ENST00000263773|FNBP4;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000260428|ENST00000567180|SCX;;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;;nc|ENSG00000109920|Q8N3X1-2|FNBP4;;ENSG00000274209|ENST00000620264|ANTXRL;;nc|ENSG00000136754|Q8IZP0-4|ABI1;;nc|ENSG00000136754|Q8IZP0-6|ABI1;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA;;ENSG00000136754|ENST00000376140|ABI1;;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;;ENSG00000107816|ENST00000454422|LZTS2;;nc|ENSG00000136754|Q8IZP0-2|ABI1;;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;;ENSG00000184863|ENST00000401878|RBM33;;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;;ENSG00000126461|ENST00000360565|SCAF1;;ENSG00000127666|ENST00000248244|TICAM1;;nc|ENSG00000136754|Q8IZP0|ABI1;;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;;ENSG00000120549|ENST00000376454|KIAA1217;;nc|ENSG00000136754|Q8IZP0-12|ABI1 4.542984326680501 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5706 29.443 145.0 344180.0 25 0 32398.0 + 34876 SQGFSHSQM 9 96 504.7137476123857 1007.4129422915714 2 504.7141296267509 MULTI CID FTMS 0 0 0 5705 327659.0625 0.3928290009243484 -4 0.0949878692626953 1 Unmodified _SQGFSHSQM_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 43.77239144664712 0.0547478964384323 4 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QM{[QS]|[NT]} 9 4 + 42.347 0.0 0.0 4.2035 4.2035 71.224 0.0 0.0 0.0 13.692030164828708 5.642492736872597 5.642492736872597 3.4678748622465605 0 0.5 0.9208187539523752 1.0044321917401078 0.2742275032520141 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QM{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}QM{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]M{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}[AG]M{[QS]|[NT]};[AG]SG{[QD]|[EN]|[WG]|[KD]|[RS]}QM{[QS]|[NT]};[AG]S{[WN]|[YH]}QM{[QS]|[NT]};{[QS]|[NT]}G[C(Carbamidomethyl (C))R]{[DA]|[EG]}{[QS]|[NT]};[AG]SG{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]M{[QS]|[NT]};[AG]{[WN]|[YH]}SQM{[QS]|[NT]};[AG]S{[WN]|[YH]}[AG]M{[QS]|[NT]} 4.2035;3.8593;3.2895;2.9399;2.8444;2.4948;2.1221;1.9347;1.6953;1.5808 -;-;-;-;-;-;-;-;-;- 213 1 2.457 45585.1 1.0 1586 4118 5705 HBL1_DMSO_200M_050219_2,5706 HBL1_DMSO_200M_050219_2,5706,SQGFSHSQM True True SQGFSHSQM 29.443374 504.714129626751 8986618.0 5705.0 ENSG00000181143|ENST00000397910|MUC16 4.85003940264384 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5707 29.45 385.0 327090.0 25 0 59319.0 + 25658 NFYDKKTAIH 10 103 412.8834780288109 1235.6286046866328 3 412.8839599490166 MULTI CID FTMS 0 0 0 5705 192069.140625 0.9575469728633778 -1 0.007293701171875 2 Unmodified _NFYDKKTAIH_ ENSG00000110619|ENST00000380525|CARS1;ENST00000531387.5_1_11:3022346-3069017:-|nuORF;nc|ENSG00000110619|P49589-2|CARS1;nc|ENSG00000110619|P49589|CARS1 29.28111348798908 0.310803607902986 4 GG{M(Oxidation (M))|F}YDKKTA{I|L}H 11 2 + 71.917 0.0 0.0 5.8203 5.8203 90.573 0.0 0.0 0.0 60.49687766944379 16.57577319177794 16.57577319177794 71.9168609512698 0 0.25 1.0969100130080565 0.4247425010840047 0.0 GG{M(Oxidation (M))|F}YDKKTA{I|L}H 5.8203 - 166 + 1 2.457 101729.6 1.0 1587 4118 5705 HBL1_DMSO_200M_050219_2,5707 HBL1_DMSO_200M_050219_2,5707,NFYDKKTAIH False True NFYDKKTAIH 29.450274 412.883959949017 1062635.625 5705.0 nc|ENSG00000110619|P49589-2|CARS1;;ENSG00000110619|ENST00000380525|CARS1;;nc|ENSG00000110619|P49589|CARS1;;ENST00000531387.5_1_11:3022346-3069017:-|nuORF 7.170984586079915 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5708 29.457 348.0 215570.0 25 0 22982.0 + 6602 EAPSQKVTV 9 98 479.76371986001874 957.5128867868376 2 479.7638427615166 MULTI CID FTMS 0 0 0 5705 148562.4375 0.4185589135565425 -6 0.1789054870605468 3 Unmodified _EAPSQKVTV_ ENSG00000073050|ENST00000262887|XRCC1;ENST00000595789.5_1_19:44056953-44079610:-|nuORF 39.94969957227396 0.0757326808254658 4 [PS]QKVTV{[CP]|[EA]} 9 4 + 39.389 0.0 0.0 4.1137 4.1137 72.15 0.0 0.0 0.0 10.737862141609192 23.33113812663257 10.737862141609192 4.259687322722812 0 0.0 1.0 0.6747425010840047 0.0 [PS]QKVTV{[CP]|[EA]};[PS]QVKTV{[CP]|[EA]};[PS][AG]KVTV{[CP]|[EA]};[PS]{I|L}NKTV{[CP]|[EA]};[PS][AG]VKTV{[CP]|[EA]};[PG]{[SA]|[TG]}KVTV{[CP]|[EA]};{[TV]|[{I|L}S]}PNKTV{[CP]|[EA]};[PG]{[SA]|[TG]}VKTV{[CP]|[EA]};[PS]{I|L}GGKTV{[CP]|[EA]};{[TV]|[{I|L}S]}PGGKTV{[CP]|[EA]} 4.1137;3.6688;3.152;2.8308;2.7071;2.6758;2.5863;2.231;1.8691;1.6247 -;-;-;-;-;-;-;-;-;- 216 1 2.457 63936.2 1.0 1588 4118 5705 HBL1_DMSO_200M_050219_2,5708 HBL1_DMSO_200M_050219_2,5708,EAPSQKVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5709 29.469 724.0 182950.0 25 0 12298.0 + 29875 RQQEKHFEV 9 152 400.8754981673262 0 400.8754760622978 PEAK CID FTMS 0 0 0 5705 143749.46875 1.0 0 0.0 4 Unmodified _QRDNFFKFV_ ENSG00000186185|ENST00000593135|KIF18B;nc|ENSG00000186185|Q86Y91-6|KIF18B 20.41453444215458 0.197313647343139 4 K 1 8 10.485 0.0 0.0 1.311 0.0 0.0 113.35930241584715 555.264192848612 668.6234952644592 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 + K 1.311 + + 38 + 1 2.457 102421.0 1.0 1589 4118 5705 HBL1_DMSO_200M_050219_2,5709 HBL1_DMSO_200M_050219_2,5709,QRDNFFKFV False False RQQEKHFEV 29.469115 400.875476062298 827927.8125 5705.0 ENSG00000186185|ENST00000593135|KIF18B;;nc|ENSG00000186185|Q86Y91-6|KIF18B 4.932539542516072 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5711 29.475 102.0 545240.0 25 0 69959.0 -1 LPPPPPPAM 9 85 466.74926325411946 931.4839735750388 2 466.7492858767509 MULTI CID FTMS 0 0 0 5710 535391.875 0.8662704964202494 5 -0.154001235961914 1 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP[WE] 8 -1 + 49.078 0.0 0.0 5.2688 5.2688 85.827 0.0 0.0 0.0 6.911225100727592 17.98577533287428 6.911225100727592 16.989700043360187 0 1.3494850021680094 1.6989700043360187 0.0 0.0 [{I|L}P]PPPP[WE];{[HG]|PP}P{I|L}PP[WE];[{I|L}P][YK]P[WE];[YK]{I|L}PP[WE];{[HG]|PP}{I|L}PPP[WE];{[HG]|PP}PAPPP{I|L}{M(Oxidation (M))|F};[YK]APPP{I|L}{M(Oxidation (M))|F};{[HG]|PP}PP{I|L}P[WE];[YK]P{I|L}P[WE];[{I|L}P]P[YK][WE] 5.2688;3.4449;3.4044;3.4031;3.3108;2.6018;2.5527;2.4767;2.4349;2.3021 -;-;-;-;-;-;-;-;-;- 433 1 2.471 47569.9 1.0 1590 4119 5710 HBL1_DMSO_200M_050219_2,5711 HBL1_DMSO_200M_050219_2,5711,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5712 29.479 194.0 235030.0 25 0 30207.0 + + 16136 STIKEVAQA 9 80 473.7637619238997 945.5129709145996 2 473.7637206912041 MULTI CID FTMS 0 0 0 5710 124004.578125 0.2407897089015722 6 -0.1835670471191406 2 Unmodified _ITTSAIAAAQ_ ENST00000469778.1_1_9:94794749-94800706:-|nuORF;ENSG00000090054|ENST00000262554|SPTLC1 9.38312468134398 0.6832340498775793 4 M{I|L}A[QA] 5 -1 16.823 0.0 0.0 1.7792 0.0 0.0 413.26399428535314 0.0 413.26399428535314 0.0 2.8701563386385924 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L}A[QA] 1.7792 - 54 1 2.471 41203.1 1.0 1591 4119 5710 HBL1_DMSO_200M_050219_2,5712 HBL1_DMSO_200M_050219_2,5712,ITTSAIAAAQ False False STIKEVAQA 29.478886 473.763720691204 2751865.25 5710.0 ENST00000469778.1_1_9:94794749-94800706:-|nuORF;;ENSG00000090054|ENST00000262554|SPTLC1 1.5604091435670853 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5713 29.484 262.0 251230.0 25 0 24202.0 + 16816 KGSSGHLSETE 11 94 377.8473150054024 1130.520115616407 3 377.8475219607353 MULTI CID FTMS 0 0 0 5710 152148.90625 0.9937307645442446 -1 0.0311813354492187 3 Unmodified _KGSSGHLSETE_ REV__ENSG00000090989|ENST00000381295|EXOC1;REV__ENST00000504321.1_1_4:56755058-56759725:+|nuORF;REV__ENST00000511971.5_1_4:56749994-56766742:+|nuORF 7.608950283845883 0.8392484121837455 4 {[QD]|[EN]|[WG]|[KD]|[RS]}QYMK 6 -1 38.659 0.0 0.0 3.4195 0.0 0.0 0.0 334.10883566939464 334.10883566939464 19.45046257204389 0.0 0.0 0.0 0 1.0 0.0 0.0 0.3252574989159953 {[QD]|[EN]|[WG]|[KD]|[RS]}QYMK 3.4195 - 157 1 2.471 58009.9 1.0 1592 4119 5710 HBL1_DMSO_200M_050219_2,5713 HBL1_DMSO_200M_050219_2,5713,KGSSGHLSETE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5714 29.49 339.0 350140.0 25 0 40251.0 + 12601 GVIPHIHKS 9 106 329.8629043082492 986.5668835249476 3 329.8624450564384 MULTI CID FTMS 0 0 0 5710 142585.453125 0.5914435192042696 -13 0.2993793487548828 4 Unmodified _GVIPHIHKS_ chr7:44834562-44835643|14|15.29|0.2|6.28|-|2|H2AZ2,None|2;ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-3|H2AZ2;nc|ENSG00000105968|Q71UI9-4|H2AZ2 15.248480904072842 0.4239247793462406 4 [H{I|L}]HKP 5 5 19.922 0.0 0.0 2.0193 0.0 0.0 0.0 371.19455066501206 371.19455066501206 0.7918124604762511 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 [H{I|L}]HKP 2.0193 - 107 1 2.471 96999.7 1.0 1593 4119 5710 HBL1_DMSO_200M_050219_2,5714 HBL1_DMSO_200M_050219_2,5714,GVIPHIHKS False True GVIPHIHKS 29.489859 329.862445056438 2691863.5 5710.0 nc|ENSG00000105968|Q71UI9-4|H2AZ2;;nc|ENSG00000105968|Q71UI9-3|H2AZ2;;chr7:44834562-44835643|14|15.29|0.2|6.28|-|2|H2AZ2,None|2;;ENSG00000105968|ENST00000308153|H2AZ2;;ENSG00000164032|ENST00000296417|H2AZ1;;ENST00000511319.5_1_4:100869621-100871200:-|nuORF 5.534033298492432 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5715 29.504 800.0 127190.0 25 0 9925.2 + 33390 SGPPTHRESL 10 132 540.7741696207153 1079.5337863082304 2 540.7748901247978 MULTI CID FTMS 0 0 0 5710 135329.5 0.7022259712811063 -3 0.0686588287353515 5 Unmodified _SGPPTHRESL_ REV__ENSG00000135253|ENST00000610776|KCP;REV__nc|ENSG00000135253|Q6ZWJ8|KCP 18.1463463914782 0.5430639438673815 4 {[TV]|[{I|L}S]}QA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TV 8 -1 20.116 0.0 0.0 1.8634 0.0 0.0 0.0 218.0727627088742 218.0727627088742 -2.6683440452687464 0.0 -2.6683440452687464 0.0 0 0.0 0.744727494896694 0.805462187404089 0.0 {[TV]|[{I|L}S]}QA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TV 1.8634 - 1172 1 2.471 80220.6 0.5899999737739563 1594 4119 5710 HBL1_DMSO_200M_050219_2,5715 HBL1_DMSO_200M_050219_2,5715,SGPPTHRESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5716 29.518 800.0 166190.0 25 0 9826.6 + 7254 EESNYELEGK 10 128 599.26712716517 1196.51970139714 2 599.2675659060478 MULTI CID FTMS 0 0 0 5710 124466.03125 0.2811256196650784 -5 0.126169204711914 6 Unmodified _EESNYELEGK_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 61.08992128646608 0.0337271188422265 4 EESNYE{I|L}EGK 10 0 + 110.6 0.0 0.0 9.2436 9.2436 92.874 0.0 0.0 0.0 68.45995240652323 16.501086700847367 16.501086700847367 9.164539485499262 0 0.3494850021680094 1.5228787452803376 0.7742275032520141 1.2689301784845295 + + EESNYE{I|L}EGK;EESGGYE{I|L}EGK;[NS]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YNS[HC];[NS]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YGGS[HC];[KG]E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YNS[HC];[VS]Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YNS[HC];[KG]E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YGGS[HC];[AG][VS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YNS[HC];EEMSQ[W{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VS]Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YGGS[HC] 9.2436;8.4776;4.2009;3.4349;3.1231;2.7905;2.3572;2.21;2.1197;2.0246 +;-;-;-;-;-;-;-;-;- + 777 + 1 2.471 101611.3 0.550000011920929 1595 4119 5710 HBL1_DMSO_200M_050219_2,5716 HBL1_DMSO_200M_050219_2,5716,EESNYELEGK True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 5718 29.522 34.0 1957000.0 25 0 334440.0 + 43126 VYPERSTSY 9 63 551.2641634404746 1100.513773947749 2 551.2645141482353 MULTI CID FTMS 0 0 0 5717 1711171.5 0.550920155330391 -9 0.262216567993164 1 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 24.020572477871973 0.2255576514309169 4 [YV]PE 4 5 43.188 0.0 0.0 3.9243 0.0 0.0 0.0 609.2628579828507 609.2628579828507 26.73393743112328 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + [YV]PE 3.9243 + + 84 + 1 2.471 58538.1 1.0 1596 4120 5717 HBL1_DMSO_200M_050219_2,5718 HBL1_DMSO_200M_050219_2,5718,VYPERSTSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5719 29.532 579.0 128790.0 25 0 15430.0 + 17681 KPTGARPSAL 10 91 499.2931674909122 0 499.2932311892509 PEAK CID FTMS 0 0 0 5717 79044.609375 0.128914905467168 8 -0.1576442718505859 2 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 18.373094154950223 0.311295710629953 4 PTG 3 7 29.253 0.0 0.0 2.9353 0.0 0.0 128.09501987413506 610.3282564752561 738.4232763493912 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + PTG 2.9353 + + 27 + 1 2.471 65460.2 1.0 1597 4120 5717 HBL1_DMSO_200M_050219_2,5719 HBL1_DMSO_200M_050219_2,5719,KPTGARPSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5720 29.54 438.0 284930.0 25 0 21817.0 + 6669 EAYLGKKV 8 107 454.26567486544985 906.5167967976996 2 454.2658874392509 MULTI CID FTMS 0 0 0 5717 205816.421875 0.2964615116476185 -4 0.1169586181640625 3 Unmodified _EAYLGKKV_ ENSG00000044574|ENST00000324460|HSPA5 71.13359017698441 0.1103988542940256 4 EAY{I|L}GKKV 8 0 + 80.035 0.0 0.0 8.8289 8.8289 98.365 0.0 0.0 0.0 52.41048801331864 11.8943306386236 11.8943306386236 53.92790030352131 0 1.1989700043360187 1.5228787452803376 0.0 0.2742275032520141 + + EAY{I|L}GKKV;[KG]K{I|L}Y{[CP]|[EA]}V;[KG]{I|L}KY{[CP]|[EA]}V;KKG{I|L}Y{[CP]|[EA]}V 8.8289;2.8799;2.2158;2.1594 +;-;-;- + 294 + 1 2.471 98940.9 1.0 1598 4120 5717 HBL1_DMSO_200M_050219_2,5720 HBL1_DMSO_200M_050219_2,5720,EAYLGKKV True True EAYLGKKV 29.540123 454.265887439251 7253873.0 5717.0 ENSG00000044574|ENST00000324460|HSPA5 6.638656775156657 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5721 29.554 800.0 234540.0 25 0 25784.0 28153 PPQPPPPPP 9 133 462.2525712764202 922.4905896196404 2 462.2526428103447 MULTI CID FTMS 0 0 0 5717 148523.53125 0.932412107548232 -4 0.1169586181640625 4 Unmodified _PPQPPPPPP_ ENSG00000077044|ENST00000264057|DGKD;ENSG00000128652|ENST00000683222|HOXD3;ENSG00000131061|ENST00000375200|ZNF341;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000148143|ENST00000277225|ZNF462;ENSG00000165556|ENST00000381020|CDX2;ENSG00000181240|ENST00000321510|SLC25A41;ENSG00000183654|ENST00000332432|MARCHF11;ENSG00000196814|ENST00000361171|MVB12B;ENSG00000198914|ENST00000361360|POU3F3;ENSG00000204612|ENST00000376708|FOXB2;ENSG00000242265|ENST00000612748|PEG10;ENST00000372441.1_1_6:43477335-43478064:-|nuORF;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;ENST00000519758.5_1_X:47078159-47081683:+|nuORF;ENST00000522234.5_1_X:47078210-47085639:+|nuORF;nc|ENSG00000131061|Q9BYN7-2|ZNF341;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000148143|Q96JM2-3|ZNF462;nc|ENSG00000168066|Q15637-5|SF1;nc|ENSG00000181240|Q8N5S1-2|SLC25A41;nc|ENSG00000196814|Q9H7P6-2|MVB12B;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10;nc|ENSG00000288658|A0A7I2V3R4|RNF228;REV__ENSG00000100207|ENST00000677622|TCF20;REV__ENSG00000117523|ENST00000647382|PRRC2C;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000165556|ENST00000381020|CDX2;REV__ENSG00000187961|ENST00000338591|KLHL17;REV__nc|ENSG00000100207|Q9UGU0-2|TCF20;REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-3|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-4|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-5|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-6|PRRC2C;REV__nc|ENSG00000117523|Q9Y520|PRRC2C;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341 53.57557251787612 0.0325303259649373 4 {[HG]|PP}QPPP[YK] 8 3 + 24.805 0.0 0.0 2.6889 2.6889 68.256 0.0 0.0 0.0 3.646457057644863 7.815407125852314 3.646457057644863 4.128498242811009 0 1.0114393726401687 0.0 0.0 0.9698565171985376 {[HG]|PP}QPPP[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KG]PP[YK];{[NV]|[RG]}{I|L}{[WT]|[RM]}PPP;{[NV]|[RG]}{I|L}[YK]GVM;{[NV]|[RG]}{I|L}{[HG]|PP}PGVM;{[HG]|PP}[AG]PPP[YK];{[NV]|[RG]}{I|L}{[WT]|[RM]}[YK];{[HG]|PP}Q[YK][YK] 2.6889;2.2414;1.7034;1.2535;0.8269;0.63355;0.57718;0.10201 -;-;-;-;-;-;-;- 329 1 2.471 147006.8 0.5899999737739563 1599 4120 5717 HBL1_DMSO_200M_050219_2,5721 HBL1_DMSO_200M_050219_2,5721,PPQPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5723 29.562 205.0 351520.0 25 0 33362.0 -1 YVMKVSSL 8 95 471.7523208273028 941.4900887214056 2 471.7522155642509 MULTI CID FTMS 0 0 0 5722 290682.8125 0.8631905380467897 -2 0.0846843719482421 1 Oxidation (M) _YVM(Oxidation (M))KVSSL_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 15.847184025352805 0.6768015514314958 4 YV{M(Oxidation (M))|F}ATT{I|L}K 8 -1 + 77.346 0.0 0.0 8.2152 8.2152 63.252 0.0 0.0 0.0 0.0 9.15105190578248 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.1747425010840047 YV{M(Oxidation (M))|F}ATT{I|L}K;VY{M(Oxidation (M))|F}ATT{I|L}K;VY{M(Oxidation (M))|F}ATTK{I|L};YV{M(Oxidation (M))|F}ATTK{I|L};VY[HA][DP]{I|L}K;YV[HA][DP]{I|L}K;VY[HA][DP]K{I|L};YV[HA][DP]K{I|L};YY[PG]TT{I|L}K;YY[PG]TTK{I|L} 8.2152;8.2152;7.2432;7.2432;5.9715;5.9715;4.9996;4.9996;3.5967;2.6248 -;-;-;-;-;-;-;-;-;- 166 + 1 2.479 61077.1 1.0 1600 4121 5722 HBL1_DMSO_200M_050219_2,5723 HBL1_DMSO_200M_050219_2,5723,YVMKVSSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5724 29.569 414.0 123840.0 25 0 8619.2 -1 DAEMTTRMV 9 91 543.2334935379079 1084.4524341426156 2 543.2338134646416 MULTI CID FTMS 0 0 0 5722 139248.328125 0.7363547375353815 3 -0.0693168640136718 2 2 Oxidation (M) _DAEM(Oxidation (M))TTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 34.93206674587334 0.1032771302489716 4 {[DA]|[EG]}E{M(Oxidation (M))|F}TTR[{M(Oxidation (M))|F}V] 9 -1 + 71.092 0.0 0.0 6.5556 6.5556 92.753 0.0 0.0 0.0 37.96597803923873 3.1234684152074976 3.1234684152074976 41.18054082491639 0 1.3494850021680094 2.0 0.3494850021680094 0.0 {[DA]|[EG]}E{M(Oxidation (M))|F}TTR[{M(Oxidation (M))|F}V];[YT]RT[PS]E[EC];WE{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{[SA]|[TG]}[{M(Oxidation (M))|F}V];[YT]RTT[DP][EC];{[DA]|[EG]}E{[QV]|[N{I|L}]|[RA]|[KV]}{[YD]|[{M(Oxidation (M))|F}M]}[{M(Oxidation (M))|F}V];[YT]R[PS]TE[EC];{[{M(Oxidation (M))|F}C]|[YS]}E{[RE]|[WV]}R[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}RTT{M(Oxidation (M))|F}E[EC];{[TV]|[{I|L}S]}RT{M(Oxidation (M))|F}TE[EC];{[DA]|[EG]}{[{M(Oxidation (M))|F}H]|[RQ]}[W{I|L}][C(Carbamidomethyl (C))H] 6.5556;2.7582;2.7582;2.7294;2.6889;2.4807;2.4385;2.4364;2.3212;2.0715 +;-;-;-;-;-;-;-;-;- + 373 + 1 2.479 45588.2 1.0 1601 4121 5722 HBL1_DMSO_200M_050219_2,5724 HBL1_DMSO_200M_050219_2,5724,DAEMTTRMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5726 29.574 77.0 640680.0 25 0 46513.0 + 39489 VARPSSGTTI 10 81 494.7748639577574 987.5351749823149 2 494.7748901247978 MULTI CID FTMS 0 0 0 5725 762222.3125 0.1496205247165007 8 -0.1510028839111328 1 Unmodified _VARPSSGTTI_ ENST00000381140.8_3_13:27998935-28001286:+|nuORF;ENST00000466776.5_1_13:27998904-28001286:+|nuORF 49.55428908609986 0.0827668555218455 4 GTT{I|L} 4 6 45.662 0.0 0.0 4.6238 0.0 0.0 597.3229237287125 0.0 597.3229237287125 0.0 34.69273760456403 0.0 0.0 0 0.9247425010840048 0.0 0.9247425010840048 0.0 + GTT{I|L} 4.6238 + + 106 1 2.479 46029.2 1.0 1602 4122 5725 HBL1_DMSO_200M_050219_2,5726 HBL1_DMSO_200M_050219_2,5726,VARPSSGTTI True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5727 29.577 152.0 392980.0 25 0 45318.0 + 22237 LPRGSSPSV 9 87 450.2505641460378 898.4865753588756 2 450.2507202029228 MULTI CID FTMS 0 0 0 5725 350653.125 0.2175737562410737 -8 0.2259273529052734 2 Unmodified _LPRGSSPSV_ ENSG00000118707|ENST00000373872|TGIF2 38.17557092003332 0.0854718145212029 4 {[QD]|[EN]|[WG]|[KD]|[RS]}[Q{I|L}]{I|L}PSV 8 5 + 30.296 0.0 0.0 3.3718 3.3718 62.908 0.0 0.0 0.0 0.1883247136530741 13.295671638727027 0.1883247136530741 0.4789142144980687 0 1.0682503180159344 0.0 1.25 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}[Q{I|L}]{I|L}PSV;[{I|L}P]R[SG]SPSV;[SG][KG]H{I|L}{[DS]|[MA]|[CV]|TT}V 3.3718;3.3185;0.70054 -;+;- + 191 1 2.479 52340.7 1.0 1603 4122 5725 HBL1_DMSO_200M_050219_2,5727 HBL1_DMSO_200M_050219_2,5727,LPRGSSPSV True True LPRGSSPSV 29.576673 450.250720202923 18692034.0 5725.0 ENSG00000118707|ENST00000373872|TGIF2 5.230865319569905 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5728 29.581 211.0 316690.0 25 0 18339.0 -1 FRCQCPAGGAF 11 96 635.7757765566205 1269.5370001800409 2 635.7764770388603 MULTI CID FTMS 0 0 0 5725 287660.84375 0.5874258917116647 -2 0.0514583587646484 3 2 Carbamidomethyl (C) _FRC(Carbamidomethyl (C))QC(Carbamidomethyl (C))PAGGAF_ ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3 18.1463463914782 0.6576820063886638 4 [NP]HDEAQQNA{M(Oxidation (M))|F} 11 -1 + 86.54 0.0 0.0 6.8166 6.8166 85.432 0.0 0.0 0.0 6.465819348763318 16.57577319177794 6.465819348763318 6.465819348763318 0 0.7614393726401688 0.7958800173440752 0.7302046884880937 0.8494850021680094 [NP]HDEAQQNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};[NP]HDEAQQGGA{M(Oxidation (M))|F};[NP]HDEAQ[AG]NA{M(Oxidation (M))|F};[NP]HDEA[AG]QNA{M(Oxidation (M))|F};[HD][NP]EAQQNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F} 6.8166;6.3073;6.1897;6.0976;6.0976;6.0976;5.7778;5.5907;5.5907;5.5907 -;-;-;-;-;-;-;-;-;- 827 1 2.479 54854.5 1.0 1604 4122 5725 HBL1_DMSO_200M_050219_2,5728 HBL1_DMSO_200M_050219_2,5728,FRCQCPAGGAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5729 29.59 525.0 211320.0 25 0 17577.0 + 6594 EAPPNTHSI 9 131 483.2376798608715 964.460806788543 2 483.2381469607353 MULTI CID FTMS 0 0 0 5725 148135.640625 0.5074111494841477 -9 0.262247085571289 4 Unmodified _EAPPNTHSI_ ENSG00000163378|ENST00000383701|EOGT;nc|ENSG00000163378|Q5NDL2-2|EOGT;nc|ENSG00000163378|Q5NDL2-3|EOGT 62.57269311338072 0.0246576765497938 4 {[CP]|[EA]}PPNTHS{I|L} 9 0 + 45.275 0.0 0.0 4.6943 4.6943 78.059 0.0 0.0 0.0 7.147642715192504 7.659167939666311 7.147642715192504 7.659167939666311 0 0.75 0.0 1.048455006504028 0.0 + + {[CP]|[EA]}PPNTHS{I|L};{[CP]|[EA]}PPNTHTV;{[CP]|[EA]}PPGGTHS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASP{[QC]|[C(Carbamidomethyl (C))A]}S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AS{[WS]|[C(Carbamidomethyl (C)){I|L}]}TGP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{[YD]|[{M(Oxidation (M))|F}M]}HS{I|L};{[CP]|[EA]}PPNPVE{I|L};{[CP]|[EA]}PPGGTHTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[HD]YS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APS{[QC]|[C(Carbamidomethyl (C))A]}S{I|L} 4.6943;3.9002;3.7396;3.2481;3.2136;3.0711;3.0299;2.9454;2.9415;2.9359 +;-;-;-;-;-;-;-;-;- + 733 + 1 2.479 85545.5 1.0 1605 4122 5725 HBL1_DMSO_200M_050219_2,5729 HBL1_DMSO_200M_050219_2,5729,EAPPNTHSI True True EAPPNTHSI 29.589933 483.238146960735 11246718.0 5725.0 ENSG00000163378|ENST00000383701|EOGT;;nc|ENSG00000163378|Q5NDL2-3|EOGT;;nc|ENSG00000163378|Q5NDL2-2|EOGT 6.427202860514323 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5730 29.596 335.0 228600.0 25 0 29048.0 13869 HVKGAQGI 8 99 405.2354105212651 808.4562681093303 2 405.2351867556572 MULTI CID FTMS 0 0 0 5725 138513.578125 0.6813182615667492 3 -0.0838088989257812 5 Unmodified _HVKGAQGI_ ENSG00000179151|ENST00000315127|EDC3 7.910154910731844 0.7763180056447161 4 HT 2 7 23.553 0.0 0.0 2.9134 0.0 0.0 0.0 567.3263643854124 567.3263643854124 3.962146486993131 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 HT 2.9134 - 37 + 1 2.479 64110.1 1.0 1606 4122 5725 HBL1_DMSO_200M_050219_2,5730 HBL1_DMSO_200M_050219_2,5730,HVKGAQGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5731 29.61 800.0 154060.0 25 0 13311.0 + -1 SGHLSQGPMG 10 141 514.7264644686668 1027.4383760041335 2 514.7275878787041 MULTI CID FTMS 0 0 0 5725 111095.875 0.5438516150286503 -6 0.1684169769287109 6 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))SGHLSQGPM(Oxidation (M))G_ REV__ENST00000597564.5_1_19:58740933-58741387:+|nuORF 24.020572477871973 0.4289996903560794 4 {[SA]|[TG]}[QP]MPP[WD] 9 -1 + 35.895 0.0 0.0 3.4936 3.4936 71.933 0.0 0.0 0.0 12.963172653011654 5.855672000862555 5.855672000862555 5.726052125589973 0 0.8807196863200843 1.3010299956639813 0.5709991640913001 0.3807196863200844 {[SA]|[TG]}[QP]MPP[WD];{[SA]|[TG]}G[PA]MPP[WD];{[QS]|[NT]}[PA]MPP[WD];[{I|L}A]{[{M(Oxidation (M))|F}C]|[YS]}HH[WD];[QP]{[SA]|[TG]}MPP[WD];[AG]S[PA]MPP[WD];[PA]{[QS]|[NT]}MPP[WD];[PG][QT]MPP[WD];{[YC]|[HE]}[{M(Oxidation (M))|F}T]PP[WD];[AG]P{[SA]|[TG]}MPP[WD] 3.4936;2.9363;1.8485;1.8463;1.4492;1.2972;1.2476;1.1682;1.161;0.898 -;-;-;-;-;-;-;-;-;- 635 1 2.479 100401.1 0.550000011920929 1607 4122 5725 HBL1_DMSO_200M_050219_2,5731 HBL1_DMSO_200M_050219_2,5731,SGHLSQGPMG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5733 29.614 8.8 4927800.0 25 0 583520.0 + 3817 DAIRQSNQI 9 80 522.7748496275655 1043.5351463219308 2 522.7756225466728 MULTI CID FTMS 0 0 0 5732 6892737.5 0.9668945588191458 1 -0.013427734375 1 Unmodified _DAIRQSNQI_ ENSG00000269335|ENST00000594239|IKBKG;nc|ENSG00000269335|Q9Y6K9-2|IKBKG;nc|ENSG00000269335|Q9Y6K9-3|IKBKG 57.24910588100465 0.0276051374632116 4 {[DA]|[EG]}{I|L}RQSGGQ{I|L} 10 2 + 96.503 0.0 0.0 9.2477 9.2477 92.667 0.0 0.0 0.0 25.76483730104272 80.81669420019658 25.76483730104272 9.164539485499247 0 1.5114393726401687 2.0 0.3252574989159953 0.0 {[DA]|[EG]}{I|L}RQSGGQ{I|L};{[DA]|[EG]}{I|L}R[AG]SGGQ{I|L};{[DA]|[EG]}{I|L}RQSGG[AG]{I|L};{[DA]|[EG]}{I|L}RQSNQ{I|L};{[DA]|[EG]}{I|L}R[AG]SGG[AG]{I|L};{[DA]|[EG]}{I|L}R[AG]SNQ{I|L};{[DA]|[EG]}{I|L}RQSN[AG]{I|L};{[DA]|[EG]}{I|L}[W{I|L}]EGQ{I|L};{[DA]|[EG]}{I|L}R[AG]SN[AG]{I|L};{[DA]|[EG]}{I|L}[W{I|L}]EG[AG]{I|L} 9.2477;8.3695;8.3695;8.3101;7.4947;7.4277;7.4277;6.8249;6.5494;5.9425 -;-;-;+;-;-;-;-;-;- + 791 1 2.479 37316.5 1.0 1608 4123 5732 HBL1_DMSO_200M_050219_2,5733 HBL1_DMSO_200M_050219_2,5733,DAIRQSNQI True True DAIRQSNQI 29.614479 522.775622546673 83018712.0 5732.0 nc|ENSG00000269335|Q9Y6K9-3|IKBKG;;nc|ENSG00000269335|Q9Y6K9-2|IKBKG;;ENSG00000269335|ENST00000594239|IKBKG 6.087931315104167 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5734 29.623 499.0 249810.0 25 0 27575.0 + + -1 LPAPPPRTA 9 130 460.2715386827952 918.5285244323904 2 460.2711669802666 MULTI CID FTMS 0 0 0 5732 146845.1875 0.6303035554593961 10 -0.2076530456542968 2 Oxidation (M) _LPAVILFM(Oxidation (M))_ ENSG00000273604|ENST00000621654|EPOP 32.45364647766026 0.3613649037604678 4 {I|L}PAPP 5 -1 55.662 0.0 0.0 6.0599 0.0 0.0 0.0 440.22590051822505 440.22590051822505 36.43182616810859 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 {I|L}PAPP 6.0599 - 321 + 1 2.479 100076.8 1.0 1609 4123 5732 HBL1_DMSO_200M_050219_2,5734 HBL1_DMSO_200M_050219_2,5734,LPAVILFM False False LPAPPPRTA 29.623281 460.271166980267 7826497.0 5732.0 ENSG00000273604|ENST00000621654|EPOP 3.9677213033040366 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5736 29.628 96.0 871690.0 25 0 100330.0 + 33182 SFEVKGLK 8 106 303.1798665097348 906.5177701294044 3 303.1795837283134 MULTI CID FTMS 0 0 0 5735 467771.1875 0.8396593632475171 -3 0.0693168640136718 1 Unmodified _SFEVKGLK_ REV__ENSG00000007174|ENST00000262442|DNAH9;REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9 8.593279151180031 0.7721714526254883 4 {[CP]|[EA]}Y{I|L}KGKV 8 -1 + 27.924 0.0 0.0 3.0804 3.0804 65.089 0.0 0.0 0.0 6.989700043360188 1.9382002601611248 1.9382002601611248 1.9382002601611248 0 0.0 0.0 0.0 0.0 {[CP]|[EA]}Y{I|L}KGKV;{[CP]|[EA]}Y{I|L}K[RK];{[CP]|[EA]}VY[KA]KV;{[CP]|[EA]}YV[KA]KV 3.0804;2.8666;1.344;1.344 -;-;-;- 72 + 1 2.479 74473.3 1.0 1610 4124 5735 HBL1_DMSO_200M_050219_2,5736 HBL1_DMSO_200M_050219_2,5736,SFEVKGLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5737 29.633 299.0 313680.0 25 0 20796.0 + 5881 DPYKHKVNI 9 108 557.3058585178136 1112.597164102427 2 557.3060180544853 MULTI CID FTMS 0 0 0 5735 304494.0 0.2455165140322104 -8 0.2226600646972656 2 Unmodified _DPYKHKVNI_ ENSG00000198793|ENST00000361445|MTOR 74.92900055777586 0.0191935851694334 4 DPYKH 5 4 65.534 0.0 0.0 5.8902 0.0 0.0 0.0 469.2782686822876 469.2782686822876 25.41779694358688 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.6861818737241735 + DPYKH 5.8902 + + 651 + 1 2.479 77108.5 1.0 1611 4124 5735 HBL1_DMSO_200M_050219_2,5737 HBL1_DMSO_200M_050219_2,5737,DPYKHKVNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5738 29.647 800.0 114130.0 25 0 25572.0 -1 0 47 1076.0971855997807 3225.2697273995423 3 1076.432666003704 MULTI CID FTMS 0 0 0 5735 168050.203125 0.705404372672802 -5 0.154001235961914 3 4 TGV 3 -1 11.682 0.0 0.0 0.36222 0.0 0.0 2165.7635323062896 799.3469332330686 2965.1104655393583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TGV 0.36222 - 76 + 1 2.479 82724.3 0.5 1612 4124 5735 HBL1_DMSO_200M_050219_2,5738 HBL1_DMSO_200M_050219_2,5738, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5739 29.653 305.0 305840.0 25 0 33214.0 -1 TVMGAELRHV 10 112 376.8656518244827 1127.575126073648 3 376.8656799197197 MULTI CID FTMS 0 0 0 5735 148290.96875 0.2989435730430669 -6 0.1851825714111328 4 Oxidation (M) _TVM(Oxidation (M))GAELRHV_ ENSG00000160808|ENST00000292327|MYL3;ENSG00000168530|ENST00000352451|MYL1;ENSG00000198336|ENST00000393450|MYL4;nc|ENSG00000168530|P05976-2|MYL1 24.95707706330732 0.4079579053029958 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}GAE{I|L}RHV 10 -1 + 64.844 0.0 0.0 5.7508 5.7508 81.493 0.0 0.0 0.0 50.15153777800478 6.102518178147349 6.102518178147349 6.53212513775344 0 0.4247425010840047 2.0 0.3252574989159953 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}GAE{I|L}RHV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}QE{I|L}RHV;{[TV]|[{I|L}S]}HQ[W{I|L}]V{M(Oxidation (M))|F}V;[YT][NP]E{I|L}RHV;{[TV]|[{I|L}S]}Y[W{I|L}][NP]HV 5.7508;5.1715;2.2562;1.6251;1.487 +;-;-;-;- + 154 + 1 2.479 79944.4 1.0 1613 4124 5735 HBL1_DMSO_200M_050219_2,5739 HBL1_DMSO_200M_050219_2,5739,TVMGAELRHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5741 29.657 44.0 2903500.0 25 0 633040.0 -1 0 57 952.951148483894 1903.887744034588 2 952.9520751833916 MULTI CID FTMS 0 0 0 5740 2414691.25 0.8825821881827237 1 -0.0074501037597656 1 4 {[VA]|[{I|L}G]}V[QT]VNKV 9 -1 18.373 0.0 0.0 0.965 0.0 0.0 0.0 962.3145988532008 962.3145988532008 6.9526103705240025 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 {[VA]|[{I|L}G]}V[QT]VNKV 0.965 - 35 1 2.479 95239.3 1.0 1614 4125 5740 HBL1_DMSO_200M_050219_2,5741 HBL1_DMSO_200M_050219_2,5741, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5742 29.66 130.0 328120.0 25 0 38489.0 + 39164 TYPEESRSY 9 62 566.2508947951986 1130.4872366571972 2 566.2501098513603 MULTI CID FTMS 0 0 0 5740 323817.3125 0.1256779254237643 9 -0.1953659057617187 2 Unmodified _TYPEESRSY_ ENSG00000123200|ENST00000679008|ZC3H13;nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13 11.494710602746466 0.5255349189887087 4 [EP]EREEP[{M(Oxidation (M))|F}V] 9 7 + 52.826 0.0 0.0 4.6729 4.6729 80.189 0.0 0.0 0.0 1.7517364849543782 36.62848732905715 1.7517364849543782 9.208187539523747 0 0.3494850021680094 1.6989700043360187 0.0 0.0 [EP]EREEP[{M(Oxidation (M))|F}V];[EP]E[VG]EEP[{M(Oxidation (M))|F}V];[YT]PE{[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M;[EP]ERS[HM][{M(Oxidation (M))|F}V];[EP]E[VG]S[NG]P[{M(Oxidation (M))|F}V];[EP]E[{I|L}P][WD][{M(Oxidation (M))|F}V];[EP]E[{I|L}P]{NN|[MP]|[D{I|L}]|[EV]}T[DC];{[MG]|[TS]}[H{I|L}]{[DS]|[MA]|[CV]|TT}EP[{M(Oxidation (M))|F}V] 4.6729;3.8584;3.3025;2.748;2.5151;1.4661;1.2022;0.69686 -;-;-;-;-;-;-;- 104 1 2.479 40642.5 1.0 1615 4125 5740 HBL1_DMSO_200M_050219_2,5742 HBL1_DMSO_200M_050219_2,5742,TYPEESRSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5744 29.665 85.0 828640.0 25 0 86024.0 + 33261 SFPASSGVSH 10 70 488.23034326897925 974.4461336047584 2 488.2302123904228 MULTI CID FTMS 0 0 0 5743 588238.3125 0.7983395192020925 17 -0.4486083984375 1 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 56.17704186161178 0.0466144807663799 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH 10 0 + 90.042 0.0 0.0 9.2403 9.2403 98.235 0.0 0.0 0.0 49.87456922954955 16.53212513775344 16.53212513775344 33.83925646871916 0 0.3807196863200844 2.0 1.110924374808178 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;{[QN]|[E{I|L}]|[KN]}VG[MN]PDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{M(Oxidation (M))|F}V]YPDT;{[QV]|[N{I|L}]|[RA]|[KV]}NG[MN]PDT;[PA]S[SG]VSH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QV]|[N{I|L}]|[RA]|[KV]}GGG[MN]PDT;[PA]S[SG][EP]P{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 9.2403;5.7677;5.3056;4.5449;3.6325;2.6875;2.5861;1.8407;1.7425;1.3203 +;-;-;-;-;-;-;-;-;- + 358 + 1 2.479 61004.5 1.0 1616 4126 5743 HBL1_DMSO_200M_050219_2,5744 HBL1_DMSO_200M_050219_2,5744,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5745 29.671 358.0 398730.0 25 0 26634.0 + 28724 PVTRSVLPH 9 133 335.86640542718897 1004.5773868817668 3 335.8660766482353 MULTI CID FTMS 0 0 0 5743 172852.015625 0.4680954984246644 -6 0.1427173614501953 2 Unmodified _PVTRSVLPH_ REV__ENSG00000157741|ENST00000473989|UBN2 12.531546534597751 0.4974689918368763 4 VPHS 4 -1 27.665 0.0 0.0 2.7539 0.0 0.0 149.10574704523043 432.2356966608032 581.3414437060336 0.0 0.0 0.0 0.0 0 0.0 0.0 1.174742501084005 0.0 VPHS 2.7539 - 303 + 1 2.479 115709.2 1.0 1617 4126 5743 HBL1_DMSO_200M_050219_2,5745 HBL1_DMSO_200M_050219_2,5745,PVTRSVLPH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5748 29.685 386.0 341330.0 25 0 35112.0 + 29673 QPATPTRTI 9 119 492.7773747405869 983.5401965479738 2 492.7772399783134 MULTI CID FTMS 0 0 0 5747 265635.0 0.2263686425295407 -8 0.1576442718505859 1 Unmodified _QPATPTRTI_ ENSG00000143190|ENST00000367866|POU2F1;nc|ENSG00000143190|P14859-2|POU2F1;nc|ENSG00000143190|P14859-3|POU2F1;nc|ENSG00000143190|P14859-4|POU2F1;nc|ENSG00000143190|P14859-5|POU2F1;nc|ENSG00000143190|P14859|POU2F1 22.65808497894818 0.2428932432760099 4 [QP]ATPTRT{I|L} 9 0 + 45.142 0.0 0.0 4.5898 4.5898 84.376 0.0 0.0 0.0 29.657910715955936 7.773660774661877 7.773660774661877 31.237125054200234 0 0.5 0.8239087409443188 0.8494850021680094 0.0 + + [QP]ATPTRT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[PG]PTRT{I|L} 4.5898;1.4138 +;- + 212 + 1 2.479 104722.9 1.0 1618 4128 5747 HBL1_DMSO_200M_050219_2,5748 HBL1_DMSO_200M_050219_2,5748,QPATPTRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5749 29.698 800.0 69789.0 25 0 11166.0 -1 TNLTMTFNNQL 11 86 656.8163634562987 1311.6181739793974 2 656.8153564333916 MULTI CID FTMS 0 0 0 5747 92235.984375 0.970078138981194 5 -0.142282485961914 2 Oxidation (M) _TNLTM(Oxidation (M))TFNNQL_ ENSG00000064393|ENST00000406875|HIPK2;nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2 8.745405648335112 0.8338865417133445 4 [Q{I|L}]R 3 -1 8.9524 0.0 0.0 0.68255 0.0 0.0 0.0 911.3505097550412 911.3505097550412 0.2802872360024366 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [Q{I|L}]R 0.68255 - 91 1 2.479 47599.7 0.5699999928474426 1619 4128 5747 HBL1_DMSO_200M_050219_2,5749 HBL1_DMSO_200M_050219_2,5749,TNLTMTFNNQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5750 29.712 800.0 59131.0 25 0 5025.6 + -1 GQGGPYMCRFA 11 99 630.2680052732105 1258.521457613221 2 630.2668334841728 MULTI CID FTMS 0 0 0 5747 90759.4296875 0.931969597650936 4 -0.1000518798828125 3 Carbamidomethyl (C),Oxidation (M) _GQGGPYM(Oxidation (M))C(Carbamidomethyl (C))RFA_ REV__ENSG00000145725|ENST00000358359|PPIP5K2;REV__ENSG00000168781|ENST00000420765|PPIP5K1;REV__ENST00000488768.5_1_15:43865553-43876720:-|nuORF;REV__nc|ENSG00000145725|O43314-2|PPIP5K2;REV__nc|ENSG00000168781|Q6PFW1-2|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1-3|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1-4|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1-5|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1-6|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1-7|PPIP5K1;REV__nc|ENSG00000168781|Q6PFW1|PPIP5K1 13.042465956692816 0.7638483625850725 4 {[QG]|[NA]}G[HD]SAQQN{[MS]|[{M(Oxidation (M))|F}A]} 12 -1 + 37.212 0.0 0.0 2.9568 2.9568 64.905 0.0 0.0 0.0 1.972893776096221 1.972893776096221 1.972893776096221 1.972893776096221 0 0.5 1.2218487496163564 0.0 0.3494850021680094 {[QG]|[NA]}G[HD]SAQQN{[MS]|[{M(Oxidation (M))|F}A]};[HV]NQQ[C(Carbamidomethyl (C))R]CTN;{[QG]|[NA]}G[DP]G[HM]EN{[MS]|[{M(Oxidation (M))|F}A]};[HV]NQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}CTN;[HV]NQQAS{[SA]|[TG]}CTN;{[QG]|[NA]}G[DP]G[HM]QD{[MS]|[{M(Oxidation (M))|F}A]};{[QG]|[NA]}YY[HM]EN{[MS]|[{M(Oxidation (M))|F}A]};{[QG]|[NA]}G[DP]YYQN{[MS]|[{M(Oxidation (M))|F}A]};{[QG]|[NA]}G[HD]SA[AG]QN{[MS]|[{M(Oxidation (M))|F}A]};{[QG]|[NA]}G[HD]SAQQGG{[MS]|[{M(Oxidation (M))|F}A]} 2.9568;2.8;2.7465;2.388;2.3721;2.3674;2.2784;2.2774;2.2339;2.2339 -;-;-;-;-;-;-;-;-;- 1084 1 2.479 44337.0 0.5699999928474426 1620 4128 5747 HBL1_DMSO_200M_050219_2,5750 HBL1_DMSO_200M_050219_2,5750,GQGGPYMCRFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5752 29.717 136.0 357370.0 25 0 31329.0 -1 DAEMTTRMV 9 81 535.2364099885674 1068.4582670439347 2 535.2361328005791 MULTI CID FTMS 0 0 0 5751 343482.1875 0.1065371986475122 11 -0.3332195281982422 1 Oxidation (M) _DAEMTTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 31.26834338654808 0.1333407332142048 4 {[DA]|[EG]}EMTTR[{M(Oxidation (M))|F}V] 9 -1 + 68.364 0.0 0.0 6.3983 6.3983 91.837 0.0 0.0 0.0 42.33288122256525 2.243012119929091 2.243012119929091 33.13023042498983 0 0.9247425010840048 2.0 0.3252574989159953 0.0 {[DA]|[EG]}EMTTR[{M(Oxidation (M))|F}V];WE[W{M(Oxidation (M))|F}]R[{M(Oxidation (M))|F}V];{[DA]|[EG]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}DR[{M(Oxidation (M))|F}V];{[DA]|[EG]}E{[QD]|[EN]|[WG]|[KD]|[RS]}[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}V];W{M(Oxidation (M))|F}[WE]R[{M(Oxidation (M))|F}V];[YT]RT[PA]E[EC];{[DA]|[EG]}{M(Oxidation (M))|F}{[NV]|[RG]}EE[{M(Oxidation (M))|F}V];{[DA]|[EG]}{M(Oxidation (M))|F}[QP][{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}V];WWW[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}V];[PS][HV]T[PA]E[EC] 6.3983;3.2976;3.1262;2.7978;2.1754;1.8834;1.5789;1.3712;0.42052;0.20259 +;-;-;-;-;-;-;-;-;- + 205 + 1 2.479 44031.4 1.0 1621 4129 5751 HBL1_DMSO_200M_050219_2,5752 HBL1_DMSO_200M_050219_2,5752,DAEMTTRMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5753 29.72 136.0 469130.0 25 0 85867.0 34654 SPPPPPPPP 9 78 441.7399800073033 881.4654070814066 2 441.7396118044853 MULTI CID FTMS 0 0 0 5751 347202.78125 0.6883829005034949 1 -0.0078678131103515 2 Unmodified _SPPPPPPPP_ ENSG00000099999|ENST00000382363|RNF215;ENSG00000100312|ENST00000216139|ACR;ENSG00000103479|ENST00000262133|RBL2;ENSG00000107816|ENST00000454422|LZTS2;ENSG00000109920|ENST00000263773|FNBP4;ENSG00000120549|ENST00000376454|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;ENSG00000136754|ENST00000376140|ABI1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000164944|ENST00000297591|VIRMA;ENSG00000184863|ENST00000401878|RBM33;ENSG00000260428|ENST00000567180|SCX;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;nc|ENSG00000109920|Q8N3X1-2|FNBP4;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000015285|ENST00000376701|WAS;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000100201|ENST00000403230|DDX17;REV__ENSG00000107816|ENST00000454422|LZTS2;REV__ENSG00000112541|ENST00000539869|PDE10A;REV__ENSG00000127666|ENST00000248244|TICAM1;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENSG00000141867|ENST00000679869|BRD4;REV__ENSG00000143006|ENST00000371445|DMRTB1;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000204334|ENST00000697325|ERICH2;REV__ENSG00000242265|ENST00000612748|PEG10;REV__ENST00000216019.11_1_22:38881942-38884127:-|nuORF;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF;REV__ENST00000361272.8_2_8:17102747-17104366:-|nuORF;REV__ENST00000431312.2_1_22:38881942-38884127:-|nuORF;REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF;REV__ENST00000482108.1_2_7:94293788-94294991:+|nuORF;REV__ENST00000508096.1_1_10:126605730-126631034:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100201|Q92841-1|DDX17;REV__nc|ENSG00000100201|Q92841-2|DDX17;REV__nc|ENSG00000100201|Q92841-3|DDX17;REV__nc|ENSG00000139218|Q99590-2|SCAF11;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000168066|Q15637-5|SF1;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 81.86404211737425 0.017065112157077 4 [PS]PPPP[YK] 8 3 + 60.32 0.0 0.0 6.8431 6.8431 92.609 0.0 0.0 0.0 20.669467896306124 42.89718984227826 20.669467896306124 20.791812460476244 0 1.1989700043360187 2.0 0.9456290139465237 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KSP[YK];[PS][YK]P[YK];[PS]P[YK][YK];{[NV]|[RG]}[YV]P[YK];{[HG]|PP}S[YK][YK] 6.8431;4.4844;4.3682;4.2901;3.0829;1.3577;0.72416 -;-;-;-;-;-;- 147 1 2.479 56033.0 1.0 1622 4129 5751 HBL1_DMSO_200M_050219_2,5753 HBL1_DMSO_200M_050219_2,5753,SPPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5755 29.728 232.0 243080.0 25 0 18510.0 + 34877 SQGFSHSQM 9 99 504.7137476123857 1007.4129422915714 2 504.7136413455009 MULTI CID FTMS 0 0 0 5754 288596.4375 0.3459969925704441 8 -0.2320899963378906 1 Unmodified _SQGFSHSQM_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 36.506200033944 0.094635877243972 4 {[QS]|[NT]}G 3 6 19.964 0.0 0.0 1.9817 0.0 0.0 0.0 732.2782431551058 732.2782431551058 6.865429718850734 0.0 0.0 0.0 0 0.5 0.0 0.2134679910804404 0.5866968715561641 + {[QS]|[NT]}G 1.9817 + + 166 1 2.474 53567.5 1.0 1623 4130 5754 HBL1_DMSO_200M_050219_2,5755 HBL1_DMSO_200M_050219_2,5755,SQGFSHSQM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5756 29.733 282.0 205320.0 25 0 20430.0 + 6603 EAPSQKVTV 9 104 479.76371986001874 957.5128867868376 2 479.7637817263603 MULTI CID FTMS 0 0 0 5754 198093.171875 0.5581065052393843 6 -0.1925582885742187 2 Unmodified _EAPSQKVTV_ ENSG00000073050|ENST00000262887|XRCC1;ENST00000595789.5_1_19:44056953-44079610:-|nuORF 32.78568957990786 0.1150597335874693 4 [PS]QKVT 6 3 24.161 0.0 0.0 2.5233 0.0 0.0 0.0 314.1371903359188 314.1371903359188 2.5807921056275944 0.0 0.0 0.0 0 0.0 0.958607314841775 0.6237125054200234 0.0 + [PS]QKVT 2.5233 + + 98 1 2.474 50066.8 1.0 1624 4130 5754 HBL1_DMSO_200M_050219_2,5756 HBL1_DMSO_200M_050219_2,5756,EAPSQKVTV True True EAPSQKVTV 29.733284 479.76378172636 4848649.5 5754.0 ENST00000595789.5_1_19:44056953-44079610:-|nuORF;;ENSG00000073050|ENST00000262887|XRCC1 6.152928988138835 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5758 29.738 90.0 518700.0 25 0 52506.0 -1 LPPPPPPAM 9 86 466.74926325411946 931.4839735750388 2 466.7489807009697 MULTI CID FTMS 0 0 0 5757 506440.5 0.8194268232821414 17 -0.4477767944335937 1 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 4 {[HG]|PP}P{I|L}PPPA{M(Oxidation (M))|F} 9 -1 {[HG]|PP}P{I|L} + + 39.821 3.9009 0.965 4.275 4.275 49.688 0.0 0.0 0.0 0.0 8.728181429864673 0.0 0.0 0 1.1861818737241734 0.0 0.0 0.0 {[HG]|PP}P{I|L}PPPA{M(Oxidation (M))|F} 4.275 - 191 + 1 2.474 40815.6 1.0 1625 4131 5757 HBL1_DMSO_200M_050219_2,5758 HBL1_DMSO_200M_050219_2,5758,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5759 29.752 800.0 241650.0 25 0 27862.0 -1 0 147 462.1455257938485 461.1382493272485 1 462.1463500857353 MULTI CID FTMS 0 0 0 5757 122513.7890625 0.5779423851872348 -80 1.4931182861328125 2 4 PPP 3 -1 12.673 0.0 0.0 2.7482 0.0 0.0 151.9693478153328 0.0 151.9693478153328 0.0 1.252864504391253 0.0 0.0 0 0.0 0.0 0.0 0.0 PPP 2.7482 - 49 + 1 2.474 150000.6 0.5600000023841858 1626 4131 5757 HBL1_DMSO_200M_050219_2,5759 HBL1_DMSO_200M_050219_2,5759, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5760 29.761 542.0 198910.0 25 0 10205.0 + 35569 STQMTITTQK 10 117 569.7917204790077 1137.5688880248154 2 569.7921630740166 MULTI CID FTMS 0 0 0 5757 139165.734375 0.1509786942999307 -7 0.1100711822509765 3 Unmodified _STQMTITTQK_ ENSG00000181143|ENST00000397910|MUC16 81.9152076656658 0.0154982280583276 4 {[MG]|[TS]}QMT{I|L}TTQK 10 0 + 79.764 0.0 0.0 7.0118 7.0118 88.81 0.0 0.0 0.0 5.764837301042718 16.572328766508114 5.764837301042718 9.164539485499262 0 1.079689690656103 0.0 1.1549471895720984 1.2803695511246984 + + {[MG]|[TS]}QMT{I|L}TTQK;{[MG]|[TS]}[AG]MT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}TT[AG]K;{[MG]|[TS]}QMT{I|L}T[KS]AA;{[MG]|[TS]}[AG]MT{I|L}TT[AG]K;{[MG]|[TS]}[AG]MT{I|L}T[KS]AA;{[MG]|[TS]}QMT{I|L}[YV]VP;{[MG]|[TS]}[AG]MT{I|L}[YV]VP;{[MG]|[TS]}Q[RN]HGKNP;{[MG]|[TS]}Q[RN]H[W{I|L}]P 7.0118;6.2062;6.2062;5.555;5.4037;4.7525;4.6435;3.5032;1.8109;1.0663 +;-;-;-;-;-;-;-;-;- + 699 + 1 2.474 83760.2 1.0 1627 4131 5757 HBL1_DMSO_200M_050219_2,5760 HBL1_DMSO_200M_050219_2,5760,STQMTITTQK True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5761 29.775 800.0 162690.0 25 0 15453.0 + 39022 TVTGKLVHA 9 136 463.2766154725129 924.5386780118258 2 463.2766906619072 MULTI CID FTMS 0 0 0 5757 91846.140625 1.0 0 0.0 4 Unmodified _TVTGKLVHA_ ENSG00000072274|ENST00000360110|TFRC 15.847184025352805 0.4077185912009129 4 {[TV]|[{I|L}S]}T 3 6 33.2 0.0 0.0 3.591 0.0 0.0 0.0 620.3499239557249 620.3499239557249 22.090606190045108 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[TV]|[{I|L}S]}T 3.591 + + 110 + 1 2.474 101228.5 0.4699999988079071 1628 4131 5757 HBL1_DMSO_200M_050219_2,5761 HBL1_DMSO_200M_050219_2,5761,TVTGKLVHA False True TVTGKLVHA 29.775145 463.276690661907 435296.71875 5757.0 ENSG00000072274|ENST00000360110|TFRC 4.171619256337483 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5763 29.78 21.0 2947800.0 25 0 451150.0 + 43127 VYPERSTSY 9 59 551.2641634404746 1100.513773947749 2 551.2641479372978 MULTI CID FTMS 0 0 0 5762 2771628.75 0.8923396290016385 3 -0.0878829956054687 1 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 24.020572477871973 0.2255576514309169 4 [YV]PE 4 5 38.94 0.0 0.0 3.5384 0.0 0.0 0.0 609.2619112604124 609.2619112604124 23.36696871556164 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [YV]PE 3.5384 + + 17 + 1 2.474 53184.8 1.0 1629 4132 5762 HBL1_DMSO_200M_050219_2,5763 HBL1_DMSO_200M_050219_2,5763,VYPERSTSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5764 29.794 800.0 82540.0 25 0 4015.5 + 7255 EESNYELEGK 10 108 599.26712716517 1196.51970139714 2 599.2674438357353 MULTI CID FTMS 0 0 0 5762 73486.6953125 0.1659809712689411 8 -0.2701168060302734 2 Unmodified _EESNYELEGK_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 49.52724829834842 0.0829255630816734 4 EESNYE{I|L}EGK 10 0 + 88.256 0.0 0.0 7.376 7.376 89.582 0.0 0.0 0.0 76.47282939796247 12.557809497117844 12.557809497117844 9.164539485499247 0 0.3494850021680094 1.6989700043360187 0.75 0.9916440611282624 + + EESNYE{I|L}EGK;EESGGYE{I|L}EGK;EES[RP]{[YC]|[HE]}EGK;[NS]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YNS[HC];[KG]E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YNS[HC];[NS]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YGGS[HC];[AG][VS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YNS[HC];[KG]E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YGGS[HC];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[HV]{[YC]|[HE]}EGK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WH]{[YC]|[HE]}EGK 7.376;6.6101;4.0185;3.1599;2.7041;2.3939;2.0152;1.9382;1.0933;0.79897 +;-;-;-;-;-;-;-;-;- + 247 + 1 2.474 50053.1 0.7200000286102295 1630 4132 5762 HBL1_DMSO_200M_050219_2,5764 HBL1_DMSO_200M_050219_2,5764,EESNYELEGK True True EESNYELEGK 29.793732 599.267443835735 4842709.0 5762.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 8.857961972554525 2.0 True 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 5765 29.804 558.0 211060.0 25 0 30599.0 + 36381 SYQESTKQL 9 131 542.2696712092883 1082.5247894853765 2 542.2692748904228 MULTI CID FTMS 0 0 0 5762 122955.5546875 0.0225847868782162 -8 0.1519947052001953 3 Unmodified _SYQESTKQL_ ENSG00000124422|ENST00000261497|USP22;ENSG00000247746|ENST00000500968|USP51;ENSG00000273820|ENST00000621775|USP27X;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22 93.16586880292088 0.0136995152735431 4 {[{M(Oxidation (M))|F}C]|[YS]}QESTKQ{I|L} 9 0 + 61.274 0.0 0.0 5.6603 5.6603 84.291 0.0 0.0 0.0 3.65279269351241 16.406615298623862 3.65279269351241 9.208187539523747 0 1.6549471895720984 0.0 0.8494850021680094 1.5629529932484498 + + {[{M(Oxidation (M))|F}C]|[YS]}QESTKQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]ESTKQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QESTK[AG]{I|L};[KT]SQEQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[KT]SQE{I|L}Q{[{M(Oxidation (M))|F}C]|[YS]};[KT]SQEQ{[{M(Oxidation (M))|F}C]|[YS]}{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]ESTK[AG]{I|L};[KT]QSEQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[{M(Oxidation (M))|F}C]|[YS]}Q[WM]KQ{I|L};[KT]SEQQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 5.6603;4.8097;4.543;4.1447;3.8898;3.793;3.6964;3.5226;3.4472;3.4218 +;-;-;-;-;-;-;-;-;- + 2634 + 1 2.474 90911.1 1.0 1631 4132 5762 HBL1_DMSO_200M_050219_2,5765 HBL1_DMSO_200M_050219_2,5765,SYQESTKQL True True SYQESTKQL 29.80353 542.269274890423 133163592.0 5762.0 ENSG00000124422|ENST00000261497|USP22;;ENSG00000273820|ENST00000621775|USP27X;;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;;nc|ENSG00000124422|Q9UPT9-2|USP22;;ENSG00000247746|ENST00000500968|USP51 8.610062758127848 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5766 29.817 800.0 193700.0 25 0 21522.0 + -1 IVPWMSCGL 9 116 539.7545000081831 1077.494447083166 2 539.7553588747978 MULTI CID FTMS 0 0 0 5762 99486.9375 0.0596518900177517 -8 0.1519947052001953 4 Carbamidomethyl (C),Oxidation (M) _IVPWM(Oxidation (M))SC(Carbamidomethyl (C))GL_ REV__ENSG00000109220|ENST00000263921|CHIC2;REV__ENST00000509678.1_1_4:54915115-54930467:-|nuORF 28.486842064014134 0.1687311288560894 4 {I|L}PVS 4 -1 58.532 0.0 0.0 5.4322 0.0 0.0 0.0 678.2326143854124 678.2326143854124 35.310209324387536 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 0.805462187404089 0.0 {I|L}PVS 5.4322 - 158 + 1 2.474 127096.7 0.5199999809265137 1632 4132 5762 HBL1_DMSO_200M_050219_2,5766 HBL1_DMSO_200M_050219_2,5766,IVPWMSCGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5768 29.827 380.0 200760.0 25 0 15532.0 + 6670 EAYLGKKV 8 92 454.26567486544985 906.5167967976996 2 454.2653991580009 MULTI CID FTMS 0 0 0 5767 197728.390625 0.2848113724177933 9 -0.2495079040527343 1 Unmodified _EAYLGKKV_ ENSG00000044574|ENST00000324460|HSPA5 64.23631603340823 0.116217441302575 4 {[CP]|[EA]}Y{I|L}GKKV 8 0 + 46.602 0.0 0.0 5.1408 5.1408 85.727 0.0 0.0 0.0 18.97759749248018 12.184290373512034 12.184290373512034 20.35002991523864 0 1.2302046884880935 0.0 0.0 0.2396518287104437 + + {[CP]|[EA]}Y{I|L}GKKV;[KG]K{I|L}Y{[CP]|[EA]}V;[KG]{I|L}KY{[CP]|[EA]}V;KKG{I|L}Y{[CP]|[EA]}V;[KG]{I|L}YK{[CP]|[EA]}V;{[QV]|[N{I|L}]|[RA]|[KV]}AKY{[CP]|[EA]}V;{[QV]|[N{I|L}]|[RA]|[KV]}AYK{[CP]|[EA]}V 5.1408;2.8959;2.3696;2.1249;1.9811;1.2911;0.90256 +;-;-;-;-;-;- + 213 + 1 2.474 65150.4 1.0 1633 4133 5767 HBL1_DMSO_200M_050219_2,5768 HBL1_DMSO_200M_050219_2,5768,EAYLGKKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5769 29.834 422.0 290750.0 25 0 29377.0 + 41291 VPHTRPVSL 9 109 503.29632844115457 1004.5781039491092 2 503.2966796755791 MULTI CID FTMS 0 0 0 5767 156117.03125 1.0 0 0.0 2 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 26.88365393820708 0.1891292719743517 4 HPV 3 6 24.693 0.0 0.0 2.458 0.0 0.0 653.3853926441769 0.0 653.3853926441769 0.0 13.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 HPV 2.458 - 48 1 2.474 95935.4 1.0 1634 4133 5767 HBL1_DMSO_200M_050219_2,5769 HBL1_DMSO_200M_050219_2,5769,VPHTRPVSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5770 29.848 800.0 82965.0 25 0 7661.7 + 18507 KYQAQDNFM 9 118 580.7554676337 1159.4963823342 2 580.7551757693291 MULTI CID FTMS 0 0 0 5767 103510.359375 0.6311973512944873 -5 0.142282485961914 3 Oxidation (M) _KYQAQDNFM(Oxidation (M))_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 71.92227651296345 0.0203558744033348 4 {[HG]|PP}PQAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F} 10 3 + 77.389 0.0 0.0 6.6743 6.6743 75.433 0.0 0.0 0.0 0.5115252244738144 14.960762528683702 0.5115252244738144 0.5115252244738144 0 0.7742275032520141 0.0 0.0 1.9291746928241125 {[HG]|PP}PQAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};[YK]QAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};[YQ]KAQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]NKQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[HG]|PP}PQAQDGG{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[HG]|PP}PQA[AG]DN{M(Oxidation (M))|F}{M(Oxidation (M))|F};[YK]QA[AG]DN{M(Oxidation (M))|F}{M(Oxidation (M))|F};[YK][AG]AQDN{M(Oxidation (M))|F}{M(Oxidation (M))|F};[YK]QAQDGG{M(Oxidation (M))|F}{M(Oxidation (M))|F};[YQ]KAQDGG{M(Oxidation (M))|F}{M(Oxidation (M))|F} 6.6743;6.6302;6.4389;6.0692;5.8839;5.8839;5.8361;5.8361;5.8361;5.6447 -;+;-;-;-;-;-;-;-;- + 1505 1 2.474 56171.4 0.5099999904632568 1635 4133 5767 HBL1_DMSO_200M_050219_2,5770 HBL1_DMSO_200M_050219_2,5770,KYQAQDNFM True False KYQAQDNFM 29.84804 580.755175769329 2482758.25 5767.0 ENST00000379752.5_1_1:157029186-157029948:-|nuORF;;nc|ENSG00000122692|Q2TAY7-2|SMU1;;ENSG00000122692|ENST00000397149|SMU1 7.94247563680013 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5772 29.853 65.0 773510.0 25 0 102080.0 + 22238 LPRGSSPSV 9 80 450.2505641460378 898.4865753588756 2 450.2504455447197 MULTI CID FTMS 0 0 0 5771 993150.75 0.6162316083483916 4 -0.1039180755615234 1 Unmodified _LPRGSSPSV_ ENSG00000118707|ENST00000373872|TGIF2 41.8396318013385 0.0653578398400075 4 [PS]V{[QV]|[N{I|L}]|[RA]|[KV]}SPSV 9 4 + 38.299 0.0 0.0 4.2626 4.2626 65.659 0.0 0.0 0.0 4.889465451849098 21.845012469977767 4.889465451849098 0.457574905606755 0 0.7742275032520141 1.0969100130080565 0.8494850021680094 0.0 [PS]V{[QV]|[N{I|L}]|[RA]|[KV]}SPSV;[PS]V[WK]PSV;[PS]V{[QV]|[N{I|L}]|[RA]|[KV]}RDV;[PS]V{[QV]|[N{I|L}]|[RA]|[KV]}[VG]DV 4.2626;4.2116;4.0428;3.0119 -;-;-;- 105 1 2.474 44835.4 1.0 1636 4134 5771 HBL1_DMSO_200M_050219_2,5772 HBL1_DMSO_200M_050219_2,5772,LPRGSSPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5773 29.856 172.0 323530.0 25 0 26813.0 + 6595 EAPPNTHSI 9 90 483.2376798608715 964.460806788543 2 483.2376586794853 MULTI CID FTMS 0 0 0 5771 233652.015625 0.8003316239587044 3 -0.0968799591064453 2 Unmodified _EAPPNTHSI_ ENSG00000163378|ENST00000383701|EOGT;nc|ENSG00000163378|Q5NDL2-2|EOGT;nc|ENSG00000163378|Q5NDL2-3|EOGT 37.97399986684836 0.0865783450051559 4 [TA]Y{M(Oxidation (M))|F}[KG]P 7 8 17.077 0.0 0.0 1.7707 0.0 0.0 0.0 197.05697990907484 197.05697990907484 3.978539592413277 0.0 0.0 0.0 0 0.5941876774005248 0.0 1.1382104921644451 0.0 [TA]Y{M(Oxidation (M))|F}[KG]P 1.7707 - 198 1 2.474 46076.5 1.0 1637 4134 5771 HBL1_DMSO_200M_050219_2,5773 HBL1_DMSO_200M_050219_2,5773,EAPPNTHSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5774 29.863 380.0 346870.0 25 0 36952.0 + -1 PLMSMAWQV 9 120 360.1721800810324 1077.4947108432973 3 360.1719848513603 MULTI CID FTMS 0 0 0 5771 165673.046875 0.1833968763355117 -8 0.1879158020019531 3 Oxidation (M) _PLMSM(Oxidation (M))AWQV_ REV__chr3:121644928-121658264|10|11.0|0.1|6.85|-|1|HCLS1,HCLS1|2 16.149105407346934 0.3995459350917656 4 {I|L}PVV{M(Oxidation (M))|F} 5 -1 45.86 0.0 0.0 4.2562 0.0 0.0 0.0 519.1455172174436 519.1455172174436 31.25621038132192 0.0 0.0 0.0 0 0.2215141619232908 1.0457574905606752 0.0 0.0 {I|L}PVV{M(Oxidation (M))|F} 4.2562 - 72 + 1 2.474 120052.8 1.0 1638 4134 5771 HBL1_DMSO_200M_050219_2,5774 HBL1_DMSO_200M_050219_2,5774,PLMSMAWQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5776 29.875 522.0 112100.0 25 0 6485.3 -1 FRCQCPAGGAF 11 92 635.7757765566205 1269.5370001800409 2 635.7755615115166 MULTI CID FTMS 0 0 0 5775 135577.0 0.2768588142980178 11 -0.297586441040039 1 2 Carbamidomethyl (C) _FRC(Carbamidomethyl (C))QC(Carbamidomethyl (C))PAGGAF_ ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3 18.1463463914782 0.6576820063886638 4 [AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F} 12 -1 + 88.493 0.0 0.0 6.9705 6.9705 80.213 0.0 0.0 0.0 2.4620809547580222 16.611814434466197 2.4620809547580222 2.4620809547580222 0 0.9247425010840048 1.6989700043360187 0.3054621874040891 1.174742501084005 [AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F};[HD][NP]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F};[HD]E[NP]AQQNA{M(Oxidation (M))|F} 6.9705;6.7766;6.2539;6.2539;6.1997;6.0575;6.0575;6.0575;5.9977;5.4883 -;-;-;-;-;-;-;-;-;- 588 1 2.474 51807.8 1.0 1639 4135 5775 HBL1_DMSO_200M_050219_2,5776 HBL1_DMSO_200M_050219_2,5776,FRCQCPAGGAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5777 29.885 573.0 190850.0 25 0 20473.0 + 3401 AYVDKYRHM 9 115 394.8619645896725 1181.5640643692177 3 394.8618041872978 MULTI CID FTMS 0 0 0 5775 140818.703125 0.7581955673088078 -2 0.0456523895263671 2 Unmodified _AYVDKYRHM_ ENSG00000070047|ENST00000264555|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1 49.93300154707207 0.0405168250806675 4 AYVDKYRHM 9 0 + 88.506 0.0 0.0 7.4905 7.4905 77.599 0.0 0.0 0.0 36.478174818886366 0.3778856088939903 0.3778856088939903 0.3778856088939903 0 0.3807196863200844 2.0 0.4247425010840047 0.75 + + AYVDKYRHM;AYVDKYRMH;AYVDKY[QA][QP];AYVDKY[QA]G[PA];AYVDKYQQ[PA];AYVDK[NP][YN]V;AYVDK[NP][QT]{M(Oxidation (M))|F};AYVDK[{I|L}P][HC]H;AYVD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KQ][QP];AYVM[WH][KT]{M(Oxidation (M))|F} 7.4905;7.4586;6.0057;5.7546;5.7076;5.4915;5.4782;5.3471;5.2651;5.0409 +;-;-;-;-;-;-;-;-;- + 860 + 1 2.474 89690.2 1.0 1640 4135 5775 HBL1_DMSO_200M_050219_2,5777 HBL1_DMSO_200M_050219_2,5777,AYVDKYRHM True True AYVDKYRHM 29.884769 394.861804187298 1045523.4375 5775.0 ENSG00000070047|ENST00000264555|PHRF1;;nc|ENSG00000070047|Q9P1Y6-3|PHRF1 7.4213128089904785 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5778 29.899 800.0 141050.0 25 0 22455.0 + 13759 HSDAYQTREI 10 100 610.2891750438818 1218.5637971545634 2 610.2884399294853 MULTI CID FTMS 0 0 0 5775 96969.2421875 1.0 0 0.0 3 Unmodified _HSDAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 46.0223103267499 0.103496714999793 4 HSDA[QA]{I|L} 7 4 65.411 0.0 0.0 5.3679 0.0 0.0 0.0 493.2011812799438 493.2011812799438 49.212819689744975 0.0 0.0 0.0 0 1.416386562212267 1.2218487496163564 0.3054621874040891 0.4247425010840047 HSDA[QA]{I|L} 5.3679 - 257 + 1 2.474 88549.9 0.4600000083446502 1641 4135 5775 HBL1_DMSO_200M_050219_2,5778 HBL1_DMSO_200M_050219_2,5778,HSDAYQTREI True True HSDAYQTREI 29.898606 610.288439929485 669883.875 5775.0 ENSG00000127914|ENST00000356239|AKAP9;;nc|ENSG00000127914|Q99996-3|AKAP9;;nc|ENSG00000127914|Q99996-6|AKAP9 3.6737911701202393 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5779 29.912 800.0 171590.0 25 0 28843.0 + 27054 PERARSPLA 9 123 498.7829191677232 0 498.7827331423759 PEAK CID FTMS 0 0 0 5775 94556.484375 1.0 0 0.0 4 Unmodified _PERARSPLA_ REV__MER70-int_dup184|chr9:104142620-104143459:+|1.5393064399095269|0.2514137796431354|2.61|48.0|13|2|sense 15.847184025352805 0.2451986057151378 4 PT 2 -1 12.831 0.0 0.0 1.2888 0.0 0.0 127.07594678958124 667.3517814979119 794.4277282874932 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 PT 1.2888 - 225 + 1 2.474 108781.3 0.4699999988079071 1642 4135 5775 HBL1_DMSO_200M_050219_2,5779 HBL1_DMSO_200M_050219_2,5779,PERARSPLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5781 29.918 100.0 585050.0 25 0 43112.0 + 5882 DPYKHKVNI 9 84 557.3058585178136 1112.597164102427 2 557.3061401247978 MULTI CID FTMS 0 0 0 5780 615191.5625 0.4960350216655459 4 -0.1327934265136718 1 Unmodified _DPYKHKVNI_ ENSG00000198793|ENST00000361445|MTOR 60.07390631473393 0.0260411565414776 4 DPYKH 5 4 52.536 0.0 0.0 4.7219 0.0 0.0 0.0 469.2777804010376 469.2777804010376 23.071968632008435 0.0 0.0 0.0 0 0.6505149978319906 1.5228787452803376 0.0 0.0 + DPYKH 4.7219 + + 142 + 1 2.474 48023.1 1.0 1643 4136 5780 HBL1_DMSO_200M_050219_2,5781 HBL1_DMSO_200M_050219_2,5781,DPYKHKVNI True True DPYKHKVNI 29.917979 557.306140124798 15005860.0 5780.0 ENSG00000198793|ENST00000361445|MTOR 6.980073134104411 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5782 29.921 165.0 255440.0 25 0 28176.0 + 3818 DAIRQSNQI 9 76 522.7748496275655 1043.5351463219308 2 522.7752563357353 MULTI CID FTMS 0 0 0 5780 309963.0625 0.0434807793806406 14 -0.32037353515625 2 Unmodified _DAIRQSNQI_ ENSG00000269335|ENST00000594239|IKBKG;nc|ENSG00000269335|Q9Y6K9-2|IKBKG;nc|ENSG00000269335|Q9Y6K9-3|IKBKG 40.23920728925047 0.0741434193262949 4 {[DA]|[EG]}{I|L}RQSNQ{I|L} 9 0 + 78.95 0.0 0.0 7.5657 7.5657 90.903 0.0 0.0 0.0 16.989700043360187 16.478174818886373 16.478174818886373 9.208187539523747 0 0.6861818737241735 2.0 0.0 0.3494850021680094 + + {[DA]|[EG]}{I|L}RQSNQ{I|L};{[DA]|[EG]}{I|L}RQSGGQ{I|L};{[DA]|[EG]}{I|L}RQSN[AG]{I|L};{[DA]|[EG]}{I|L}R[AG]SNQ{I|L};{[DA]|[EG]}{I|L}G{[QV]|[N{I|L}]|[RA]|[KV]}SNQ{I|L};{[DA]|[EG]}{I|L}G[WK]NQ{I|L};{[QN]|[E{I|L}]|[KN]}GRQSNQ{I|L};{[DA]|[EG]}{I|L}R[AG]SGGQ{I|L};{[DA]|[EG]}{I|L}RQSGG[AG]{I|L};{[DA]|[EG]}{I|L}R[AG]SN[AG]{I|L} 7.5657;6.6833;6.6833;6.6833;6.5909;6.2534;5.9376;5.805;5.805;5.805 +;-;-;-;-;-;-;-;-;- + 790 1 2.474 37920.1 1.0 1644 4136 5780 HBL1_DMSO_200M_050219_2,5782 HBL1_DMSO_200M_050219_2,5782,DAIRQSNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5783 29.924 162.0 519540.0 25 0 82465.0 26805 PAPPPPPPP 9 101 433.74220658394137 0 433.7420532107353 PEAK CID FTMS 0 0 0 5780 257680.5625 0.4657751665448064 -28 0.713836669921875 3 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;ENSG00000103495|ENST00000322945|MAZ;ENSG00000105429|ENST00000251268|MEGF8;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139687|ENST00000267163|RB1;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000158195|ENST00000618852|WASF2;ENSG00000165821|ENST00000537235|SALL2;ENSG00000167771|ENST00000301459|RCOR2;ENSG00000169862|ENST00000304623|CTNND2;ENSG00000171634|ENST00000306378|BPTF;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000182601|ENST00000331351|HS3ST4;ENSG00000184937|ENST00000452863|WT1;ENSG00000196367|ENST00000456197|TRRAP;ENSG00000197483|ENST00000598519|ZNF628;ENSG00000205177|ENST00000379011|C11orf91;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000272333|ENST00000420124|KMT2B;ENST00000263228.3_1_9:33817570-33817774:+|nuORF;ENST00000378204.6_1_8:119123785-119123992:-|nuORF;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;ENST00000592092.1_1_19:36224173-36224410:+|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000103495|P56270-2|MAZ;nc|ENSG00000103495|P56270-3|MAZ;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000169862|Q9UQB3-2|CTNND2;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;nc|nan|Q3C1V1-2|C11orf91;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000060749|ENST00000650167|QSER1;REV__ENSG00000077420|ENST00000376236|APBB1IP;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000108819|ENST00000612501|PPP1R9B;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000112320|ENST00000317357|SOBP;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__ENSG00000126464|ENST00000418929|PRR12;REV__ENSG00000136848|ENST00000408936|DAB2IP;REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000168874|ENST00000306279|ATOH8;REV__ENSG00000171450|ENST00000302625|CDK5R2;REV__ENSG00000176058|ENST00000409012|TPRN;REV__ENSG00000176165|ENST00000313071|FOXG1;REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENSG00000182484|ENST00000359512|WASH6P;REV__ENSG00000188620|ENST00000357878|HMX3;REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENSG00000247746|ENST00000500968|USP51;REV__ENSG00000274588|ENST00000611977|DGKK;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000400706.3_1_12:88275-90926:+|nuORF;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;REV__ENST00000557932.5_1_15:102513813-102516466:+|nuORF;REV__ENST00000602719.5_1_16:85784553-85784670:-|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000168874|Q96SQ7-2|ATOH8;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6;REV__nc|ENSG00000234769|A8MWX3|WASH4P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P;REV__nc|ENSG00000292372|Q9NQA3|WASH6P 56.04830969593885 0.0209912446699182 4 {M(Oxidation (M))|F}PPPE 5 6 40.126 0.0 0.0 4.6364 0.0 0.0 215.15588943436163 80.05117975406483 295.2070691884265 0.0 0.0 0.0 0.0 0 1.5 0.0 1.2279659778248622 0.0 {M(Oxidation (M))|F}PPPE 4.6364 - 80 + 1 2.474 71404.1 1.0 1645 4136 5780 HBL1_DMSO_200M_050219_2,5783 HBL1_DMSO_200M_050219_2,5783,PAPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5784 29.931 372.0 208250.0 25 0 23372.0 + -1 TVMGAEIRHV 10 99 376.8656518244827 1127.575126073648 3 376.8654357790947 MULTI CID FTMS 0 0 0 5780 126736.75 0.2554918698032034 6 -0.1544151306152343 4 Oxidation (M) _TVM(Oxidation (M))GAELRHV_ ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENSG00000092841|ENST00000550697|MYL6;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 24.95707706330732 0.4079579053029958 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}GAE{I|L}RHV 10 -1 + 70.565 0.0 0.0 6.2581 6.2581 83.468 0.0 0.0 0.0 55.96124840090599 10.21076683145924 10.21076683145924 6.53212513775344 0 0.3807196863200844 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}GAE{I|L}RHV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}QE{I|L}RHV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G{[QN]|[E{I|L}]|[KN]}ARHV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[W{I|L}][KS]T{M(Oxidation (M))|F};[YT][NP]E{I|L}RHV 6.2581;5.6788;4.1014;3.0497;2.5482 +;-;-;-;- + 111 + 1 2.474 69141.7 1.0 1646 4136 5780 HBL1_DMSO_200M_050219_2,5784 HBL1_DMSO_200M_050219_2,5784,TVMGAELRHV False False TVMGAEIRHV 29.9311 376.865435779095 4970380.5 5780.0 ENST00000548725.5_1_12:56552185-56553955:+|nuORF;;ENSG00000092841|ENST00000550697|MYL6;;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;;nc|ENSG00000092841|P60660-2|MYL6 8.959650675455729 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5785 29.945 800.0 99379.0 25 0 17020.0 + 11192 GEMQGGPNRCY 11 92 606.2519730934157 1210.4893932536313 2 606.2515746951103 MULTI CID FTMS 0 0 0 5780 86108.3125 1.0 0 0.0 5 Unmodified _GEMQGGPNRCY_ REV__ENSG00000169071|ENST00000375708|ROR2 24.99096001346401 0.505407273373304 4 {[DA]|[EG]}MQV 5 -1 56.026 0.0 0.0 4.6283 0.0 0.0 0.0 663.2340773335808 663.2340773335808 41.7288529850385 0.0 0.0 0.0 0 1.0 2.0 0.0 0.3807196863200844 {[DA]|[EG]}MQV 4.6283 - 122 + 1 2.474 60766.6 0.4699999988079071 1647 4136 5780 HBL1_DMSO_200M_050219_2,5785 HBL1_DMSO_200M_050219_2,5785,GEMQGGPNRCY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5787 29.95 54.0 1155200.0 25 0 149450.0 + 29674 QPATPTRTI 9 73 492.7773747405869 983.5401965479738 2 492.7771484255791 MULTI CID FTMS 0 0 0 5786 1046666.1875 0.8919472360417295 1 -0.0070381164550781 1 Unmodified _QPATPTRTI_ ENSG00000143190|ENST00000367866|POU2F1;nc|ENSG00000143190|P14859-2|POU2F1;nc|ENSG00000143190|P14859-3|POU2F1;nc|ENSG00000143190|P14859-4|POU2F1;nc|ENSG00000143190|P14859-5|POU2F1;nc|ENSG00000143190|P14859|POU2F1 17.44264345198275 0.3645313841742926 4 [QP]ATPTRT{I|L} 9 0 + 32.278 0.0 0.0 3.2818 3.2818 79.554 0.0 0.0 0.0 16.793512686778705 8.19775651841369 8.19775651841369 22.998037644757048 0 0.5 0.0 0.4247425010840047 0.0 + + [QP]ATPTRT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[PG]PTRT{I|L} 3.2818;0.94353 +;- + 52 + 1 2.474 54112.3 1.0 1648 4137 5786 HBL1_DMSO_200M_050219_2,5787 HBL1_DMSO_200M_050219_2,5787,QPATPTRTI False True QPATPTRTI 29.949716 492.777148425579 31829706.0 5786.0 nc|ENSG00000143190|P14859-4|POU2F1;;ENSG00000143190|ENST00000367866|POU2F1;;nc|ENSG00000143190|P14859|POU2F1;;nc|ENSG00000143190|P14859-2|POU2F1;;nc|ENSG00000143190|P14859-5|POU2F1;;nc|ENSG00000143190|P14859-3|POU2F1 5.439301649729411 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5788 29.952 106.0 695540.0 25 0 70840.0 + 33262 SFPASSGVSH 10 78 488.23034326897925 974.4461336047584 2 488.2300598025322 MULTI CID FTMS 0 0 0 5786 526903.125 0.7150972293709279 28 -0.6402988433837891 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 65.23502041540118 0.0228537820337083 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH 10 0 + 91.169 0.0 0.0 9.3559 9.3559 97.898 0.0 0.0 0.0 53.85249585179414 15.026975159433531 15.026975159433531 26.920605305551803 0 0.3807196863200844 2.0 1.3996498648046138 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSGVSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASSG[HS]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV]QGVSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV][AG]GVSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DV]QG[HS]V;[PA]S[SG]VSH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[PA]S[KS]DH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[HS][KQ]YPDT 9.3559;6.5933;5.8295;4.9966;4.8846;4.8409;3.0669;2.5912;1.7344;1.4361 +;-;-;-;-;-;-;-;-;- + 306 + 1 2.474 61688.2 1.0 1649 4137 5786 HBL1_DMSO_200M_050219_2,5788 HBL1_DMSO_200M_050219_2,5788,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5790 29.958 158.0 478470.0 25 0 77284.0 + 12537 GVGPVPARA 9 76 412.2429195084503 822.4712860837005 2 412.2423278689384 MULTI CID FTMS 0 0 0 5789 392614.9375 0.1233599306935857 -15 0.3422775268554687 1 Unmodified _GVGPVPARA_ ENSG00000129636|ENST00000320640|ITFG1 28.486842064014134 0.1687311288560894 4 [VG]GPV 5 4 48.328 0.0 0.0 5.8759 0.0 0.0 0.0 410.21585221358686 410.21585221358686 24.426806100157563 0.0 0.0 0.0 0 0.6109243748081782 2.0 0.0 0.0 + [VG]GPV 5.8759 + + 82 + 1 2.474 65736.6 1.0 1650 4138 5789 HBL1_DMSO_200M_050219_2,5790 HBL1_DMSO_200M_050219_2,5790,GVGPVPARA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5791 29.963 319.0 326700.0 25 0 22759.0 20116 LKGHSITHL 9 114 335.86640542718897 1004.5773868817668 3 335.8656799197197 MULTI CID FTMS 0 0 0 5789 125841.375 0.3407873546633402 6 -0.1869640350341797 2 Unmodified _LKGHSITHL_ ENSG00000070476|ENST00000389709|ZXDC;ENSG00000198205|ENST00000358697|ZXDA;ENSG00000198455|ENST00000374888|ZXDB;nc|ENSG00000070476|Q2QGD7-2|ZXDC;nc|ENSG00000070476|Q2QGD7-3|ZXDC 10.073929032068715 0.563993802247229 4 HPV 3 8 21.172 0.0 0.0 2.1076 0.0 0.0 653.3850204610999 0.0 653.3850204610999 0.0 5.955612550363796 0.0 0.0 0 0.0994850021680094 0.0 0.0 0.0 HPV 2.1076 - 98 1 2.474 84618.5 1.0 1651 4138 5789 HBL1_DMSO_200M_050219_2,5791 HBL1_DMSO_200M_050219_2,5791,LKGHSITHL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5792 29.977 800.0 136250.0 25 0 9989.9 + 2479 AQYEDIAQKS 10 126 576.7817090317537 1151.5488651303074 2 576.7806274294853 MULTI CID FTMS 0 0 0 5789 120825.5390625 0.6236091979365699 -3 0.0889720916748046 3 Unmodified _AQYEDIAQKS_ ENSG00000167768|ENST00000252244|KRT1 48.07275321834293 0.0914622731454193 4 [QA]YED{I|L}AQSK 10 2 [QA] + + 59.565 21.025 10.56 5.1726 5.1726 53.246 0.0 0.0 0.0 0.0 32.39792088966729 0.0 0.0 0 1.566901560044258 0.0 0.3494850021680094 0.8829131673969606 [QA]YED{I|L}AQSK 5.1726 - 892 + 1 2.474 85878.7 0.5600000023841858 1652 4138 5789 HBL1_DMSO_200M_050219_2,5792 HBL1_DMSO_200M_050219_2,5792,AQYEDIAQKS True True AQYEDIAQKS 29.977256 576.780627429485 1325957.0 5789.0 ENSG00000167768|ENST00000252244|KRT1 5.111982981363933 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5794 29.995 800.0 165440.0 25 0 16007.0 + 29783 QPYNSRPAV 9 140 516.2665360811866 1030.518519229173 2 516.2665893435478 MULTI CID FTMS 0 0 0 5793 100339.8828125 0.5341885532007671 -1 0.0252857208251953 1 Unmodified _QPYNSRPAV_ ENSG00000144597|ENST00000396842|EAF1;nc|ENSG00000144597|Q96JC9-2|EAF1 43.77239144664712 0.0547478964384323 4 QPYNSRAPV 9 2 + 57.278 0.0 0.0 5.5582 5.5582 83.821 0.0 0.0 0.0 32.88431778173193 11.573996519486514 11.573996519486514 9.208187539523747 0 0.9731975075880328 0.0 0.0 0.8494850021680094 QPYNSRAPV;QPYGGSRAPV;QPYNSRV[PA];QP[NS]YRAPV;QPYGGSRV[PA];[VS]VRSN{[CA]|SS}PV;[VS]VRSGG{[CA]|SS}PV;[VS]V[VG]SN{[CA]|SS}PV;[VS]VRS[C(Carbamidomethyl (C))Q]PV;QP[NS]YRV[PA] 5.5582;4.6646;4.253;3.4974;3.3594;3.321;2.4317;2.4317;2.275;2.1921 -;-;-;-;-;-;-;-;-;- 654 + 1 2.482 107634.0 0.5299999713897705 1653 4139 5793 HBL1_DMSO_200M_050219_2,5794 HBL1_DMSO_200M_050219_2,5794,QPYNSRPAV True True QPYNSRPAV 29.994956 516.266589343548 1379428.875 5793.0 nc|ENSG00000144597|Q96JC9-2|EAF1;;ENSG00000144597|ENST00000396842|EAF1 6.592487176259358 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5795 30.009 800.0 158020.0 25 0 15873.0 + 42677 SIIGKKGESV 10 106 509.3006005668838 1016.5866482005677 2 509.3014099001884 MULTI CID FTMS 0 0 0 5793 127749.3671875 0.697972770048761 -6 0.1599102020263672 2 Unmodified _VTVSLLWSL_ nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000197111|Q15366-7|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 25.399314129420983 0.2080152500878129 4 VT{I|L}GH 5 6 56.81 0.0 0.0 5.5883 0.0 0.0 0.0 506.2712801568969 506.2712801568969 38.48258770979733 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VT{I|L}GH 5.5883 - 359 + 1 2.482 99201.0 0.550000011920929 1654 4139 5793 HBL1_DMSO_200M_050219_2,5795 HBL1_DMSO_200M_050219_2,5795,VTVSLLWSL False False SIIGKKGESV 30.008773 509.301409900188 2869609.75 5793.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000197111|Q15366-7|PCBP2;;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 4.426224788029988 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5796 30.022 774.0 218460.0 25 0 20760.0 + 45710 YYDPKTRAM 9 139 382.18629409986016 1143.5370528997803 3 382.1859924197197 MULTI CID FTMS 0 0 0 5793 102064.6640625 0.8654041555079216 1 -0.0679759979248046 3 Unmodified _YYDPKTRAM_ ENSG00000164609|ENST00000297151|SLU7;ENST00000520841.1_1_5:159833399-159835410:-|nuORF 17.44264345198275 0.3645313841742926 4 YYD 3 6 29.181 0.0 0.0 2.5518 0.0 0.0 0.0 699.3600542230336 699.3600542230336 10.764837301042714 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + YYD 2.5518 + + 108 1 2.482 140994.3 1.0 1655 4139 5793 HBL1_DMSO_200M_050219_2,5796 HBL1_DMSO_200M_050219_2,5796,YYDPKTRAM False True YYDPKTRAM 30.022147 382.18599241972 1660950.75 5793.0 ENSG00000164609|ENST00000297151|SLU7;;ENST00000520841.1_1_5:159833399-159835410:-|nuORF 3.077139417330424 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5797 30.031 525.0 193480.0 25 0 10046.0 + 3695 DAFKDDRKI 9 113 554.2932504137617 1106.571947894323 2 554.2935668826103 MULTI CID FTMS 0 0 0 5793 100447.390625 1.0 0 0.0 4 Unmodified _DAFKDDRKI_ ENSG00000065485|ENST00000316218|PDIA5;ENST00000467157.1_1_3:122864388-122880365:+|nuORF 29.43715596616401 0.1566398223704148 4 DA{M(Oxidation (M))|F}KDDRK{I|L} 9 0 + 60.434 0.0 0.0 5.4613 5.4613 84.688 0.0 0.0 0.0 45.74085316798076 6.311508337315175 6.311508337315175 9.897089349194005 0 0.9163865622122672 1.2218487496163564 0.0 0.0 + + DA{M(Oxidation (M))|F}KDDRK{I|L};DA{M(Oxidation (M))|F}KDD[K{I|L}]R;W{M(Oxidation (M))|F}KTC{[VA]|[{I|L}G]}PR;W{M(Oxidation (M))|F}KT{[WS]|[C(Carbamidomethyl (C)){I|L}]}PR;W{M(Oxidation (M))|F}KTC[R{I|L}][PG] 5.4613;4.5669;3.0738;2.7604;1.8848 +;-;-;-;- + 451 + 1 2.482 81880.9 1.0 1656 4139 5793 HBL1_DMSO_200M_050219_2,5797 HBL1_DMSO_200M_050219_2,5797,DAFKDDRKI False True DAFKDDRKI 30.031401 554.29356688261 694209.5 5793.0 ENST00000467157.1_1_3:122864388-122880365:+|nuORF;;ENSG00000065485|ENST00000316218|PDIA5 3.760593255360922 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5798 30.045 800.0 112520.0 25 0 19465.0 + 18142 KTMETAEKL 9 126 525.7784855181195 1049.542418103039 2 525.7776367068291 MULTI CID FTMS 0 0 0 5793 99818.453125 0.8901509446003262 -1 0.0252857208251953 5 Unmodified _KTMETAEKL_ ENSG00000064607|ENST00000452918|SUGP2;ENST00000598240.1_1_19:19105804-19136912:-|nuORF;nc|ENSG00000064607|Q8IX01-3|SUGP2;nc|ENSG00000064607|Q8IX01-4|SUGP2 77.04852534044906 0.0183742546292268 4 KTMETAE{I|L}K 9 2 + 78.718 0.0 0.0 7.5002 7.5002 79.768 0.0 0.0 0.0 16.478174818886373 1.4663648028671616 1.4663648028671616 1.4663648028671616 0 2.7728787452803374 0.0 0.7614393726401688 0.3054621874040891 KTMETAE{I|L}K;KTMETAEK{I|L};[MT]EATKE{I|L}K;[MT]EKTAE{I|L}K;[KT]METAE{I|L}K;[MT]EAETK{I|L}K;[MT]EATEK{I|L}K;[MT]KETAE{I|L}K;[{M(Oxidation (M))|F}V]DATKE{I|L}K;[{M(Oxidation (M))|F}V]DKTAE{I|L}K 7.5002;7.3605;4.9554;4.7507;4.7489;4.5365;4.4535;4.414;3.959;3.7543 -;+;-;-;-;-;-;-;-;- + 1057 + 1 2.482 74501.4 0.5 1657 4139 5793 HBL1_DMSO_200M_050219_2,5798 HBL1_DMSO_200M_050219_2,5798,KTMETAEKL True True KTMETAEKL 30.045235 525.777636706829 839144.25 5793.0 ENST00000598240.1_1_19:19105804-19136912:-|nuORF;;ENSG00000064607|ENST00000452918|SUGP2;;nc|ENSG00000064607|Q8IX01-4|SUGP2;;nc|ENSG00000064607|Q8IX01-3|SUGP2 6.666635831197103 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5800 30.05 37.0 1491900.0 25 0 231590.0 + 43128 VYPERSTSY 9 60 551.2641634404746 1100.513773947749 2 551.2643920779228 MULTI CID FTMS 0 0 0 5799 1453723.375 0.4680334540181508 11 -0.2032661437988281 1 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 30.63653989081413 0.1413794767160703 4 [YV]PE 4 5 43.188 0.0 0.0 3.9243 0.0 0.0 0.0 609.2618568569086 609.2618568569086 27.614393726401687 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + [YV]PE 3.9243 + + 34 + 1 2.482 48481.5 1.0 1658 4140 5799 HBL1_DMSO_200M_050219_2,5800 HBL1_DMSO_200M_050219_2,5800,VYPERSTSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5801 30.052 118.0 298690.0 25 0 20410.0 + 35570 STQMTITTQK 10 65 569.7917204790077 1137.5688880248154 2 569.7925292849541 MULTI CID FTMS 0 0 0 5799 414274.09375 0.449439382744335 2 -0.0216217041015625 2 Unmodified _STQMTITTQK_ ENSG00000181143|ENST00000397910|MUC16 53.31671820480216 0.0606844387689228 4 {[MG]|[TS]}QMT{I|L}TTQK 10 0 + 64.826 0.0 0.0 5.6986 5.6986 83.709 0.0 0.0 0.0 52.3514532483668 13.322646798160562 13.322646798160562 9.164539485499256 0 0.805462187404089 0.0 0.5 0.7614393726401688 + + {[MG]|[TS]}QMT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}TT[AG]K;{[MG]|[TS]}[AG]MT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}T[KS]AA;{[MG]|[TS]}[AG]MT{I|L}TT[AG]K;{[MG]|[TS]}[AG]MT{I|L}T[KS]AA 5.6986;4.893;4.893;4.4035;4.0905;3.6011 +;-;-;-;-;- + 135 + 1 2.482 32281.4 1.0 1659 4140 5799 HBL1_DMSO_200M_050219_2,5801 HBL1_DMSO_200M_050219_2,5801,STQMTITTQK True True STQMTITTQK 30.052487 569.792529284954 10277794.0 5799.0 ENSG00000181143|ENST00000397910|MUC16 10.630179405212402 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5802 30.056 168.0 744830.0 25 0 76652.0 15345 IPLTLHTV 8 117 447.2761269222121 892.5377009112242 2 447.2762634158134 MULTI CID FTMS 0 0 0 5799 441536.65625 0.1199608077922136 -43 1.0848865509033203 3 Unmodified _IPLTLHTV_ ENSG00000039600|ENST00000265007|SOX30;nc|ENSG00000039600|O94993-2|SOX30 34.18733598223924 0.3315367612694167 4 {I|L}PP 3 6 47.435 0.0 0.0 5.3146 0.0 0.0 0.0 582.3275850885374 582.3275850885374 38.10270717893526 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {I|L}PP 5.3146 - 124 + 1 2.482 103495.4 1.0 1660 4140 5799 HBL1_DMSO_200M_050219_2,5802 HBL1_DMSO_200M_050219_2,5802,IPLTLHTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5803 30.058 115.0 625600.0 25 0 70742.0 + 44546 YPESNSRAI 9 89 518.7561024368582 1035.4976519405163 2 518.7567626833916 MULTI CID FTMS 0 0 0 5799 416045.5 0.7014620976860394 -24 0.6447715759277344 4 Unmodified _YPESNSRAI_ ENSG00000166037|ENST00000325542|CEP57;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 31.26834338654808 0.1333407332142048 4 YPEHN 5 5 60.094 0.0 0.0 5.8034 0.0 0.0 0.0 392.2004183404906 392.2004183404906 49.12462815080637 0.0 0.0 0.0 0 0.5866968715561641 1.6989700043360187 0.3807196863200844 0.3252574989159953 YPEHN 5.8034 - 69 + 1 2.482 62806.0 1.0 1661 4140 5799 HBL1_DMSO_200M_050219_2,5803 HBL1_DMSO_200M_050219_2,5803,YPESNSRAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5804 30.061 134.0 370800.0 25 0 38836.0 + + 43083 YVMKVSSL 8 82 471.7532892431749 941.4920255531498 2 471.7520934939384 MULTI CID FTMS 0 0 0 5799 306313.75 0.9424114173417608 -1 0.0679759979248046 5 Unmodified _VYLTTSMK_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 11.640296217721598 0.738950129755968 4 YV{M(Oxidation (M))|F}[TA]T{I|L}K 8 -1 + 51.178 0.0 0.0 5.4358 5.4358 54.376 0.0 0.0 0.0 38.07882975038464 0.7324609481026201 0.7324609481026201 0.0 0 0.4247425010840047 2.0 0.0 0.0 YV{M(Oxidation (M))|F}[TA]T{I|L}K;VY{M(Oxidation (M))|F}[TA]T{I|L}K;VY[HA][DP]{I|L}K;YV[HA][DP]{I|L}K;VY{M(Oxidation (M))|F}[TA]TK{I|L};YV{M(Oxidation (M))|F}[TA]TK{I|L};VY[HA][DP]K{I|L};YV[HA][DP]K{I|L};VY[EP][{I|L}P][QP];YV[EP][{I|L}P][QP] 5.4358;5.4358;5.1201;5.1201;4.9041;4.9041;4.5884;4.5884;3.2823;3.2823 -;-;-;-;-;-;-;-;-;- 82 + 1 2.482 43345.5 1.0 1662 4140 5799 HBL1_DMSO_200M_050219_2,5804 HBL1_DMSO_200M_050219_2,5804,VYLTTSMK False False YVMKVSSL 30.060884 471.752093493938 2251048.25 5799.0 ENSG00000108021|ENST00000695737|TASOR2;;nc|ENSG00000108021|Q5VWN6-2|TASOR2 3.5016930103302 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5806 30.066 11.0 4574900.0 25 0 746090.0 + 36382 SYQESTKQL 9 86 542.2696712092883 1082.5247894853765 2 542.2698852419853 MULTI CID FTMS 0 0 0 5805 5169444.0 0.9495365322502431 1 -0.0059700012207031 1 Unmodified _SYQESTKQL_ ENSG00000124422|ENST00000261497|USP22;ENSG00000247746|ENST00000500968|USP51;ENSG00000273820|ENST00000621775|USP27X;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22 70.33199760932243 0.0209706178985989 4 {[{M(Oxidation (M))|F}C]|[YS]}QE{[MG]|[TS]}KQ{I|L} 9 0 + 50.706 0.0 0.0 4.684 4.684 80.234 0.0 0.0 0.0 10.77791668231594 17.80877995733176 10.77791668231594 9.208187539523747 0 1.6382104921644451 0.0 0.8807196863200843 0.7134679910804405 + + {[{M(Oxidation (M))|F}C]|[YS]}QE{[MG]|[TS]}KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]E{[MG]|[TS]}KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QE{[MG]|[TS]}K[AG]{I|L};{[{M(Oxidation (M))|F}C]|[YS]}Q[WM]KQ{I|L};[KT]QSEQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[KT]SQEQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[KT]QSE{I|L}Q{[{M(Oxidation (M))|F}C]|[YS]};[KT]SQE{I|L}Q{[{M(Oxidation (M))|F}C]|[YS]};[KT]SEQQ{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[KT]SEQ{I|L}Q{[{M(Oxidation (M))|F}C]|[YS]} 4.684;3.8334;3.5667;3.272;2.9567;2.9567;2.8424;2.8424;2.6786;2.5644 +;-;-;-;-;-;-;-;-;- + 804 + 1 2.482 42537.1 1.0 1663 4141 5805 HBL1_DMSO_200M_050219_2,5806 HBL1_DMSO_200M_050219_2,5806,SYQESTKQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5807 30.067 32.0 1515900.0 25 0 190020.0 -1 LPGMLCAGYP 10 48 539.7545000081831 1077.494447083166 2 539.7552368044853 MULTI CID FTMS 0 0 0 5805 1611837.625 0.9664501003759836 1 -0.0059700012207031 2 Carbamidomethyl (C) _LPGMLC(Carbamidomethyl (C))AGYP_ ENSG00000178226|ENST00000268281|PRSS36;nc|ENSG00000178226|Q5K4E3-2|PRSS36;nc|ENSG00000178226|Q5K4E3-3|PRSS36 12.531546534597751 0.6372748319968624 4 {I|L}PV 3 -1 43.984 0.0 0.0 4.0821 0.0 0.0 0.0 765.2656584047593 765.2656584047593 19.547509540478032 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 {I|L}PV 4.0821 - 10 + 1 2.482 46941.3 1.0 1664 4141 5805 HBL1_DMSO_200M_050219_2,5807 HBL1_DMSO_200M_050219_2,5807,LPGMLCAGYP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5809 30.073 200.0 309790.0 25 0 36270.0 -1 LPPPPPPAM 9 92 466.74926325411946 931.4839735750388 2 466.7492553591728 MULTI CID FTMS 0 0 0 5808 274143.9375 0.4435681898025196 28 -0.7584590911865234 1 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 79.93452657146344 0.0175326119056068 4 [{I|L}P]PPPPPA{M(Oxidation (M))|F} 9 -1 + 78.242 0.0 0.0 8.3997 8.3997 96.029 0.0 0.0 0.0 32.658715643802765 16.478174818886373 16.478174818886373 19.20818753952375 0 1.5669015600442575 1.6989700043360187 0.0 0.0 [{I|L}P]PPPPPA{M(Oxidation (M))|F};[{I|L}P]PPPP[WE];[{I|L}P][YK]PPA{M(Oxidation (M))|F};[{I|L}P]PP[YK]A{M(Oxidation (M))|F};[{I|L}P]P[YK]PA{M(Oxidation (M))|F};[{I|L}P][YK]P[WE];[{I|L}P]PP{[MS]|[{M(Oxidation (M))|F}A]}[YK];[{I|L}P]P[YK][WE];[{I|L}P][RV]{[ET]|[MV]}A{M(Oxidation (M))|F};[YK]{I|L}PP[WE] 8.3997;6.3376;6.2521;5.4729;5.1497;4.1973;3.2709;3.095;2.9963;2.5445 +;-;-;-;-;-;-;-;-;- + 268 + 1 2.482 50576.2 1.0 1665 4142 5808 HBL1_DMSO_200M_050219_2,5809 HBL1_DMSO_200M_050219_2,5809,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5810 30.087 800.0 153190.0 25 0 17564.0 -1 IQEEDCSLQ 9 95 561.243840184635 1120.47312743607 2 561.2439453005791 MULTI CID FTMS 0 0 0 5808 97973.609375 0.9994218145428108 1 -0.0418910980224609 2 Carbamidomethyl (C) _IQEEDC(Carbamidomethyl (C))SLQ_ ENSG00000186648|ENST00000342740|CARMIL3;ENST00000559694.5_1_14:24526437-24530034:+|nuORF 10.073929032068715 0.563993802247229 4 ER 2 -1 16.281 0.0 0.0 1.4531 0.0 0.0 817.2918280549837 0.0 817.2918280549837 0.0 0.0835593887173757 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 ER 1.4531 - 45 1 2.482 99696.3 0.5 1666 4142 5808 HBL1_DMSO_200M_050219_2,5810 HBL1_DMSO_200M_050219_2,5810,IQEEDCSLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5811 30.095 442.0 245740.0 25 0 21577.0 + 36369 SYQDRRQSW 9 107 409.1953583286991 1224.5642455862971 3 409.1953918337822 MULTI CID FTMS 0 0 0 5808 148027.328125 0.7534066030195912 -3 0.0895977020263671 3 Unmodified _SYQDRRQSW_ ENSG00000149636|ENST00000373750|DSN1;nc|ENSG00000149636|Q9H410-2|DSN1;nc|ENSG00000149636|Q9H410-4|DSN1 32.78568957990786 0.1150597335874693 4 SYWGWHRPH 9 7 + 81.711 0.0 0.0 6.6726 6.6726 91.588 0.0 0.0 0.0 65.07261053950863 6.911225100727592 6.911225100727592 18.372727025023003 0 0.5554621874040891 2.0 0.0 0.805462187404089 SYWGWHRPH;SY[VS]G{[DA]|[EG]}HRPH;SYWG[RP][EP]PH;SWYGWHRPH;SYWG[RP]QQG{M(Oxidation (M))|F};SWYG[RP]QQG{M(Oxidation (M))|F};S[VS]YG{[DA]|[EG]}HRPH;SWYG[RP][EP]PH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RP]DQ[MT];SW{[RE]|[WV]}[Y{I|L}]WW 6.6726;5.1723;5.0249;4.1149;4.0603;3.1358;2.6146;2.4672;1.4896;0.7865 -;-;-;-;-;-;-;-;-;- 410 + 1 2.482 90057.8 1.0 1667 4142 5808 HBL1_DMSO_200M_050219_2,5811 HBL1_DMSO_200M_050219_2,5811,SYQDRRQSW True True SYQDRRQSW 30.09488 409.195391833782 1626018.625 5808.0 nc|ENSG00000149636|Q9H410-2|DSN1;;nc|ENSG00000149636|Q9H410-4|DSN1;;ENSG00000149636|ENST00000373750|DSN1 8.34076197942098 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5812 30.109 800.0 59333.0 25 0 16979.0 -1 0 31 1133.131307580932 3396.372093342997 3 1133.466845691204 MULTI CID FTMS 0 0 0 5808 93424.796875 0.689198173722303 -7 0.2038555145263672 4 4 G{M(Oxidation (M))|F} 2 -1 7.9588 0.0 0.0 0.23433 0.0 0.0 1943.6861325049088 1245.59558645 3189.281718954909 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 0.23433 - 10 + 1 2.482 48803.2 0.3400000035762787 1668 4142 5808 HBL1_DMSO_200M_050219_2,5812 HBL1_DMSO_200M_050219_2,5812, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5814 30.125 800.0 61566.0 25 0 5504.4 + 18508 KYQAQDNFM 9 104 580.7554676337 1159.4963823342 2 580.7568237185478 MULTI CID FTMS 0 0 0 5813 49602.76171875 0.3024734142825169 5 -0.0722236633300781 1 Oxidation (M) _KYQAQDNFM(Oxidation (M))_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 49.93300154707207 0.0405168250806675 4 YQ[WQ]N{M(Oxidation (M))|F}{M(Oxidation (M))|F} 7 3 49.882 0.0 0.0 4.302 0.0 0.0 128.09527785468907 0.0 128.09527785468907 0.0 40.4178851384269 0.0 0.0 0 1.0 0.0 0.0 1.2302046884880935 YQ[WQ]N{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4.302 - 511 1 2.482 39817.4 0.4799999892711639 1669 4143 5813 HBL1_DMSO_200M_050219_2,5814 HBL1_DMSO_200M_050219_2,5814,KYQAQDNFM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5815 30.139 800.0 139870.0 25 0 6903.7 + 15434 IPPQNASQV 9 140 477.2559245924782 952.4972962517564 2 477.2558166384697 MULTI CID FTMS 0 0 0 5813 109724.0078125 1.0 0 0.0 2 Unmodified _IPPQNASQV_ ENSG00000171016|ENST00000563719|PYGO1;nc|ENSG00000171016|Q9Y3Y4|PYGO1 39.957323273325 0.0756908302845263 4 [AG]YSV 5 7 22.351 0.0 0.0 2.3466 0.0 0.0 0.0 472.2578607871658 472.2578607871658 9.58679110921434 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [AG]YSV 2.3466 - 574 1 2.482 85688.8 0.4900000095367431 1670 4143 5813 HBL1_DMSO_200M_050219_2,5815 HBL1_DMSO_200M_050219_2,5815,IPPQNASQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5817 30.145 78.0 646420.0 25 0 105420.0 -1 PLVGCEFWA 9 69 360.1721800810324 1077.4947108432973 3 360.1720153689384 MULTI CID FTMS 0 0 0 5816 690096.375 0.7639234138124493 2 -0.0216503143310546 1 Carbamidomethyl (C) _PLVGC(Carbamidomethyl (C))EFWA_ nc|ENSG00000079482|O60890-2|OPHN1 16.149105407346934 0.3995459350917656 4 {I|L}PVG 4 -1 41.67 0.0 0.0 3.8673 0.0 0.0 0.0 708.2374971979124 708.2374971979124 15.728050365394424 0.0 0.0 0.0 0 0.2742275032520141 1.0 0.0 0.0 {I|L}PVG 3.8673 - 62 + 1 2.487 53475.3 1.0 1671 4144 5816 HBL1_DMSO_200M_050219_2,5817 HBL1_DMSO_200M_050219_2,5817,PLVGCEFWA False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 5818 30.156 642.0 137620.0 25 0 12304.0 + 6596 EAPPNTHSI 9 118 483.2376798608715 964.460806788543 2 483.2384521365166 MULTI CID FTMS 0 0 0 5816 88097.3671875 0.3017611842939057 13 -0.2419776916503906 2 Unmodified _EAPPNTHSI_ ENSG00000163378|ENST00000383701|EOGT;nc|ENSG00000163378|Q5NDL2-2|EOGT;nc|ENSG00000163378|Q5NDL2-3|EOGT 36.12702656103203 0.0967173616627612 4 [VP][QT]G{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{I|L} 9 7 + 32.187 0.0 0.0 3.3373 3.3373 65.14 0.0 0.0 0.0 10.108624503186483 3.819707371725397 3.819707371725397 1.751284189090832 0 0.7302046884880937 2.0 0.0 0.3054621874040891 [VP][QT]G{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{I|L};[VP]{[ET]|[MV]}{[YD]|[{M(Oxidation (M))|F}M]}E{I|L};[VP][QT]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}{I|L};{[CP]|[EA]}PKG{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{I|L};[TA]T{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[SA]|[TG]}E{I|L};{[CP]|[EA]}PK{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[PA]E{I|L};{[QN]|[E{I|L}]|[KN]}[PS]{[YD]|[{M(Oxidation (M))|F}M]}E{I|L};[VP][QT][HS]P{[CP]|[EA]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[WT]|[RM]}{[SA]|[TG]}E{I|L} 3.3373;3.1557;2.6789;2.0796;2.01;1.4211;1.2646;1.2646;1.044;0.82294 -;-;-;-;-;-;-;-;-;- 294 1 2.487 72021.8 1.0 1672 4144 5816 HBL1_DMSO_200M_050219_2,5818 HBL1_DMSO_200M_050219_2,5818,EAPPNTHSI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5820 30.161 105.0 549290.0 25 0 43398.0 + 4197 DAPKAGQLEA 10 88 500.25904055705394 998.503528180908 2 500.2589599490166 MULTI CID FTMS 0 0 0 5819 612798.0 0.2839845601428362 -11 0.3077468872070312 1 Unmodified _DAPKAGQLEA_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 20.41453444215458 0.5050059513928961 4 {[DA]|[EG]}W 3 8 31.254 0.0 0.0 3.1301 0.0 0.0 0.0 623.3165987604124 623.3165987604124 1.0610626524299214 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[DA]|[EG]}W 3.1301 - 350 + 1 2.487 49253.6 1.0 1673 4145 5819 HBL1_DMSO_200M_050219_2,5820 HBL1_DMSO_200M_050219_2,5820,DAPKAGQLEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5823 30.181 800.0 232560.0 25 0 19449.0 + 31599 RQTGKILKV 9 154 348.2291592278653 1041.665648283796 3 348.2286865115166 MULTI CID FTMS 0 0 0 5822 150217.59375 1.0 0 0.0 1 Unmodified _RQTGKILKV_ ENSG00000113643|ENST00000231572|RARS1;nc|ENSG00000113643|P54136-2|RARS1 49.55428908609986 0.0413471690215031 4 {I|L}{I|L}{[MG]|[TS]}R{I|L}{I|L}KV 9 4 + 52.774 0.0 0.0 5.0663 5.0663 72.345 0.0 0.0 0.0 2.275844697417853 11.05596729259129 2.275844697417853 2.275844697417853 0 1.110924374808178 1.2218487496163564 0.4247425010840047 0.3807196863200844 {I|L}{I|L}{[MG]|[TS]}R{I|L}{I|L}KV;{[{M(Oxidation (M))|F}H]|[RQ]}{[SA]|[TG]}K{I|L}{I|L}KV;[KG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}{I|L}KV;{I|L}{I|L}{[MG]|[TS]}[VG]{I|L}{I|L}KV;{I|L}{I|L}{[MG]|[TS]}[K{I|L}]{I|L}RV;[K{I|L}][{I|L}V]{[DS]|[MA]|[CV]|TT}{I|L}RV 5.0663;4.8479;4.6349;3.8169;1.8397;0.61109 -;+;-;-;-;- + 183 1 2.487 156094.8 0.4300000071525574 1674 4147 5822 HBL1_DMSO_200M_050219_2,5823 HBL1_DMSO_200M_050219_2,5823,RQTGKILKV True True RQTGKILKV 30.180959 348.228686511517 1121175.5 5822.0 nc|ENSG00000113643|P54136-2|RARS1;;ENSG00000113643|ENST00000231572|RARS1 4.427156050999959 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5825 30.186 104.0 601160.0 25 0 98683.0 26806 PAPPPPPPP 9 76 433.74220658394137 0 433.7423278689384 PEAK CID FTMS 0 0 0 5824 310220.59375 0.5607448513681935 -16 0.405853271484375 1 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;ENSG00000103495|ENST00000322945|MAZ;ENSG00000105429|ENST00000251268|MEGF8;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139687|ENST00000267163|RB1;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000158195|ENST00000618852|WASF2;ENSG00000165821|ENST00000537235|SALL2;ENSG00000167771|ENST00000301459|RCOR2;ENSG00000169862|ENST00000304623|CTNND2;ENSG00000171634|ENST00000306378|BPTF;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000182601|ENST00000331351|HS3ST4;ENSG00000184937|ENST00000452863|WT1;ENSG00000196367|ENST00000456197|TRRAP;ENSG00000197483|ENST00000598519|ZNF628;ENSG00000205177|ENST00000379011|C11orf91;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000272333|ENST00000420124|KMT2B;ENST00000263228.3_1_9:33817570-33817774:+|nuORF;ENST00000378204.6_1_8:119123785-119123992:-|nuORF;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;ENST00000592092.1_1_19:36224173-36224410:+|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000103495|P56270-2|MAZ;nc|ENSG00000103495|P56270-3|MAZ;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000169862|Q9UQB3-2|CTNND2;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;nc|nan|Q3C1V1-2|C11orf91;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000060749|ENST00000650167|QSER1;REV__ENSG00000077420|ENST00000376236|APBB1IP;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000108819|ENST00000612501|PPP1R9B;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000112320|ENST00000317357|SOBP;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__ENSG00000126464|ENST00000418929|PRR12;REV__ENSG00000136848|ENST00000408936|DAB2IP;REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000168874|ENST00000306279|ATOH8;REV__ENSG00000171450|ENST00000302625|CDK5R2;REV__ENSG00000176058|ENST00000409012|TPRN;REV__ENSG00000176165|ENST00000313071|FOXG1;REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENSG00000182484|ENST00000359512|WASH6P;REV__ENSG00000188620|ENST00000357878|HMX3;REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENSG00000247746|ENST00000500968|USP51;REV__ENSG00000274588|ENST00000611977|DGKK;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000400706.3_1_12:88275-90926:+|nuORF;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;REV__ENST00000557932.5_1_15:102513813-102516466:+|nuORF;REV__ENST00000602719.5_1_16:85784553-85784670:-|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000168874|Q96SQ7-2|ATOH8;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6;REV__nc|ENSG00000234769|A8MWX3|WASH4P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P;REV__nc|ENSG00000292372|Q9NQA3|WASH6P 56.04830969593885 0.0209912446699182 4 V{M(Oxidation (M))|F}PPP 5 6 29.949 0.0 0.0 3.4604 0.0 0.0 116.08724412315776 209.09334741763908 325.18059154079685 0.0 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 V{M(Oxidation (M))|F}PPP 3.4604 - 82 + 1 2.487 53114.8 1.0 1675 4148 5824 HBL1_DMSO_200M_050219_2,5825 HBL1_DMSO_200M_050219_2,5825,PAPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5826 30.191 254.0 373200.0 25 0 29080.0 + -1 TPMPMILP 8 107 458.2391035184713 914.4636541037428 2 458.2393981814384 MULTI CID FTMS 0 0 0 5824 276698.375 0.043208928263154 -15 0.3636226654052734 2 Oxidation (M) _TPMPM(Oxidation (M))ILP_ REV__nc|ENSG00000176046|O60356-2|NUPR1 28.17323086031832 0.4514957916281387 4 TPMG 4 -1 63.488 0.0 0.0 6.9426 0.0 0.0 0.0 525.2784804285418 525.2784804285418 52.07325943207756 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.0 0.0 TPMG 6.9426 - 136 + 1 2.487 79313.3 1.0 1676 4148 5824 HBL1_DMSO_200M_050219_2,5826 HBL1_DMSO_200M_050219_2,5826,TPMPMILP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5827 30.202 669.0 116540.0 25 0 12429.0 + 748 AEQNRKDAEAW 11 103 439.8776690013724 1316.6111776043172 3 439.8776428103447 MULTI CID FTMS 0 0 0 5824 119546.8046875 0.8878802476178893 -7 0.1200847625732421 3 Unmodified _AEQNRKDAEAW_ CON__P08727;CON__P13645;CON__Q7Z3Y7;CON__Q7Z3Y9;CON__Q99456;ENSG00000171345|ENST00000361566|KRT19;ENSG00000173908|ENST00000306658|KRT28;ENSG00000186393|ENST00000335552|KRT26;ENSG00000186395|ENST00000269576|KRT10;ENSG00000187242|ENST00000251643|KRT12;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;ENST00000471565.2_1_17:39680334-39680852:-|nuORF 37.250883937326 0.2547447105151842 4 [MT]ATAGN{NN|[MP]|[D{I|L}]|[EV]}NRGP 13 11 + 49.463 0.0 0.0 3.7569 3.7569 63.529 0.0 0.0 0.0 0.2575317302218138 0.2575317302218138 0.2575317302218138 0.2575317302218138 0 0.0 1.3979400086720375 0.8494850021680094 0.7614393726401688 [MT]ATAGN{NN|[MP]|[D{I|L}]|[EV]}NRGP;[TA]RN{NN|[MP]|[D{I|L}]|[EV]}NGAEAW;[MT]ATA[EP]{[WT]|[RM]}RGP;[TA]R{[WT]|[RM]}[EP]AEAW;[MT]ATQN{NN|[MP]|[D{I|L}]|[EV]}NRGP;[TA]RN{NN|[MP]|[D{I|L}]|[EV]}NQEAW;{[CT]|[{M(Oxidation (M))|F}G]}AEAGN{NN|[MP]|[D{I|L}]|[EV]}NRGP;[MT]ATAGGG{NN|[MP]|[D{I|L}]|[EV]}NRGP;[MT]ATAGN{NN|[MP]|[D{I|L}]|[EV]}GGRGP;[MT]ATAGN{NN|[MP]|[D{I|L}]|[EV]}N[VG]GP 3.7569;3.7373;3.3072;3.2899;3.235;3.2178;3.0879;3.0678;3.0678;3.0678 -;-;-;-;-;-;-;-;-;- 625 + 1 2.487 66645.1 1.0 1677 4148 5824 HBL1_DMSO_200M_050219_2,5827 HBL1_DMSO_200M_050219_2,5827,AEQNRKDAEAW False True AEQNRKDAEAW 30.202415 439.877642810345 1312577.625 5824.0 ENST00000471565.2_1_17:39680334-39680852:-|nuORF;;Q99456;;P08727;;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;;ENSG00000173908|ENST00000306658|KRT28;;ENSG00000186395|ENST00000269576|KRT10;;ENSG00000186393|ENST00000335552|KRT26;;Q7Z3Y9;;P13645;;Q7Z3Y7;;ENSG00000171345|ENST00000361566|KRT19;;ENSG00000187242|ENST00000251643|KRT12 8.453336715698242 3.0 True 11.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 5829 30.208 156.0 482710.0 25 0 48929.0 + 29675 QPATPTRTI 9 78 492.7773747405869 983.5401965479738 2 492.7776061892509 MULTI CID FTMS 0 0 0 5828 409356.65625 0.3488452597953747 13 -0.2866477966308594 1 Unmodified _QPATPTRTI_ ENSG00000143190|ENST00000367866|POU2F1;nc|ENSG00000143190|P14859-2|POU2F1;nc|ENSG00000143190|P14859-3|POU2F1;nc|ENSG00000143190|P14859-4|POU2F1;nc|ENSG00000143190|P14859-5|POU2F1;nc|ENSG00000143190|P14859|POU2F1 19.361941925380144 0.3125782356748823 4 [SG]VE[HK]TVK 9 9 + 21.181 0.0 0.0 2.1536 2.1536 68.757 0.0 0.0 0.0 -2.8915947561237907 1.61622501717439 -2.8915947561237907 4.948500216800937 0 0.0 0.0 0.3494850021680094 0.2614393726401688 [SG]VE[HK]TVK;[SG]VT[{I|L}P][WP]K;{[QV]|[N{I|L}]|[RA]|[KV]}[YV]P{[YC]|[HE]}{I|L};[DG]{[TV]|[{I|L}S]}[HK]TVK 2.1536;1.6504;0.54691;0.32488 -;-;-;- 125 + 1 2.487 63219.9 1.0 1678 4149 5828 HBL1_DMSO_200M_050219_2,5829 HBL1_DMSO_200M_050219_2,5829,QPATPTRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5830 30.219 627.0 134640.0 25 0 9873.4 21418 LPGQQAAGLRP 11 114 554.3167948624847 1106.6190367917693 2 554.3174926638603 MULTI CID FTMS 0 0 0 5828 87304.4765625 0.7519519508607801 -15 0.3543643951416015 2 Unmodified _LPGQQAAGLRP_ ENST00000369878.8_1_10:104679325-104679463:+|nuORF 21.53697664764585 0.586507868110548 4 {I|L}P[QP]{[ET]|[MV]}G{I|L}PR 10 6 + 43.038 0.0 0.0 3.8891 3.8891 70.306 0.0 0.0 0.0 18.72363747448347 1.5839172150142955 1.5839172150142955 3.521825181113627 0 0.3494850021680094 1.6989700043360187 0.0 0.2887254899964357 {I|L}P[QP]{[ET]|[MV]}G{I|L}PR;{I|L}P[QP]{[WT]|[RM]}{I|L}PR;{I|L}{I|L}HS{[QS]|[NT]}G{I|L}PR;{I|L}[YG]K{[CT]|[{M(Oxidation (M))|F}G]}G{I|L}PR;[VS]{M(Oxidation (M))|F}K{[CT]|[{M(Oxidation (M))|F}G]}G{I|L}PR;{I|L}[YG]K{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}PR;[VS]{M(Oxidation (M))|F}K{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}PR;{[QN]|[E{I|L}]|[KN]}[KA]{[CT]|[{M(Oxidation (M))|F}G]}K{M(Oxidation (M))|F}[PA] 3.8891;3.5709;3.1884;2.1971;1.9251;1.8789;1.6069;0.011145 -;-;-;-;-;-;-;- 137 + 1 2.487 68389.3 1.0 1679 4149 5828 HBL1_DMSO_200M_050219_2,5830 HBL1_DMSO_200M_050219_2,5830,LPGQQAAGLRP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5831 30.233 800.0 116310.0 25 0 8646.0 + 31384 RNVSTGDVNVE 11 100 595.2937860712003 1188.5730192092003 2 595.2944213747978 MULTI CID FTMS 0 0 0 5828 90677.5234375 0.271597844013426 -9 0.1571846008300781 3 Unmodified _RNVSTGDVNVE_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 21.799462835604743 0.5803446114589816 4 {[NV]|[RG]}RST[DG]VNVE 11 2 + 48.224 0.0 0.0 4.0573 4.0573 75.16 0.0 0.0 0.0 3.231235680268618 39.807682735423136 3.231235680268618 7.087298416251748 0 0.9247425010840048 0.0 0.0 0.3807196863200844 {[NV]|[RG]}RST[DG]VNVE;{[NV]|[RG]}RSWWNVE;[KG][RD]T[DG]VNVE;{[NV]|[RG]}RST[DG]VGGVE;[VS][RN]T[DG]VNVE;{M(Oxidation (M))|F}VNV{[WS]|[C(Carbamidomethyl (C)){I|L}]}[RN][PA];[KG][RD]WWNVE;{[NV]|[RG]}RSWWGGVE;[VS][RN]WWNVE;{M(Oxidation (M))|F}VN[RD]T[RN][PA] 4.0573;3.461;3.4128;3.2893;3.1032;2.8832;2.8166;2.6863;2.507;2.3767 -;-;-;-;-;-;-;-;-;- 221 1 2.487 77838.8 0.449999988079071 1680 4149 5828 HBL1_DMSO_200M_050219_2,5831 HBL1_DMSO_200M_050219_2,5831,RNVSTGDVNVE False True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 5833 30.238 20.0 2873300.0 25 0 542980.0 + 12538 GVGPVPARA 9 64 412.2429195084503 822.4712860837005 2 412.2428771853447 MULTI CID FTMS 0 0 0 5832 2887513.25 0.9072589969830438 -3 0.0682086944580078 1 Unmodified _GVGPVPARA_ ENSG00000129636|ENST00000320640|ITFG1 28.486842064014134 0.1687311288560894 4 [VG]GPVA 6 3 52.58 0.0 0.0 6.393 0.0 0.0 0.0 339.17768274478755 339.17768274478755 29.90417829939986 0.0 0.0 0.0 0 0.6549471895720984 2.0 0.0 0.0 [VG]GPVA 6.393 - 54 + 1 2.487 51759.7 1.0 1681 4150 5832 HBL1_DMSO_200M_050219_2,5833 HBL1_DMSO_200M_050219_2,5833,GVGPVPARA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5834 30.241 171.0 484620.0 25 0 65886.0 + 33263 SFPASSGVSH 10 85 488.23034326897925 974.4461336047584 2 488.2304260134697 MULTI CID FTMS 0 0 0 5832 367078.90625 0.4981885594622077 41 -1.230184555053711 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 49.93300154707207 0.0805441195901191 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 74.135 0.0 0.0 7.6079 7.6079 94.378 0.0 0.0 0.0 38.89050805527644 16.53212513775344 16.53212513775344 17.93157681736544 0 0.3807196863200844 2.0 1.0941876774005248 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAYY{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}CAPDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD][WQ]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[VG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}{[QN]|[E{I|L}]|[KN]}SAPDT;[PA]S[SG]VSH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD][EP][QP] 7.6079;5.7677;5.3056;4.1804;3.7829;3.3721;3.1648;2.3791;2.3425;1.4353 +;-;-;-;-;-;-;-;-;- + 289 + 1 2.487 71077.7 1.0 1682 4150 5832 HBL1_DMSO_200M_050219_2,5834 HBL1_DMSO_200M_050219_2,5834,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5835 30.248 425.0 162450.0 25 0 28922.0 + -1 QSLMVHNC 8 103 474.2069793063481 946.3994056794962 2 474.2072936892509 MULTI CID FTMS 0 0 0 5832 108008.625 0.4985078411358148 -14 0.32037353515625 3 Oxidation (M) _QSLM(Oxidation (M))VHNC_ REV__ENSG00000051009|ENST00000449352|FHIP1B;REV__nc|ENSG00000051009|Q8N612-2|FHIP1B;REV__nc|ENSG00000051009|Q8N612-3|FHIP1B 36.04419817259434 0.3004715606373109 4 {[QS]|[NT]}[WC(Carbamidomethyl (C))]G{I|L} 6 -1 45.352 0.0 0.0 4.7921 0.0 0.0 0.0 212.06716125372927 212.06716125372927 23.92544976785331 0.0 0.0 0.0 0 0.4247425010840047 1.0457574905606752 0.2614393726401688 1.5356668758921828 {[QS]|[NT]}[WC(Carbamidomethyl (C))]G{I|L} 4.7921 - 69 1 2.487 62180.5 1.0 1683 4150 5832 HBL1_DMSO_200M_050219_2,5835 HBL1_DMSO_200M_050219_2,5835,QSLMVHNC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5837 30.265 800.0 141710.0 25 0 16089.0 + 38918 TVLLSWLSV 9 104 509.3006005668838 1016.5866482005677 2 509.3005859255791 MULTI CID FTMS 0 0 0 5836 100606.390625 0.5496741212508321 6 -0.1324138641357422 1 Unmodified _TVLLSWLSV_ REV__ENSG00000145248|ENST00000273861|SLC10A4 39.957323273325 0.0756908302845263 4 {[TV]|[{I|L}S]}{I|L}GK 5 -1 41.07 0.0 0.0 4.04 0.0 0.0 0.0 515.2476900690061 515.2476900690061 22.34636880228201 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}GK 4.04 - 585 + 1 2.487 89044.6 0.5199999809265137 1684 4151 5836 HBL1_DMSO_200M_050219_2,5837 HBL1_DMSO_200M_050219_2,5837,TVLLSWLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5838 30.274 518.0 252420.0 25 0 36077.0 + 32135 RVPETVADA 9 124 479.2536089249196 956.4926649166392 2 479.2534973025322 MULTI CID FTMS 0 0 0 5836 152878.53125 0.1298806877506756 -13 0.2965278625488281 2 Unmodified _RVPETVADA_ ENSG00000137714|ENST00000260270|FDX1;ENST00000449115.1_1_20:33063731-33063836:-|nuORF 49.55428908609986 0.0413471690215031 4 [RV][EP]TVADA 9 0 + 64.349 0.0 0.0 6.7276 6.7276 83.909 0.0 0.0 0.0 5.402194737753433 5.402194737753433 5.402194737753433 5.402194737753433 0 1.3494850021680094 1.0457574905606752 0.805462187404089 0.0 + + [RV][EP]TVADA;{[DA]|[EG]}V[VP]TVAW;{[DA]|[EG]}V[VP]TVWA;[EP][RV]TVADA;[KP]QQTVADA;[VP]{[RE]|[WV]}TVADA;[YK][YK]VADA;{[VA]|[{I|L}G]}D[VP]TVAW;{[DA]|[EG]}V[RP][{I|L}T]DA;{[VA]|[{I|L}G]}D[VP]TVWA 6.7276;6.1628;6.0841;4.9348;4.8207;4.8207;4.067;3.5631;3.5444;3.4844 +;-;-;-;-;-;-;-;-;- + 275 1 2.487 103497.9 1.0 1685 4151 5836 HBL1_DMSO_200M_050219_2,5838 HBL1_DMSO_200M_050219_2,5838,RVPETVADA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5839 30.288 800.0 123960.0 25 0 23128.0 17455 KPAATTRVPL 10 98 527.3243095543544 1052.634066175509 2 527.3242065310478 MULTI CID FTMS 0 0 0 5836 100062.734375 0.5304387821737204 -9 0.1816444396972656 3 Unmodified _KPAATTRVPL_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|22|2|sense 10.823927491677226 0.6659270209832991 4 KPT 3 7 28.5 0.0 0.0 2.7075 0.0 0.0 56.06312251626384 667.353397312304 723.4165198285679 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.4247425010840047 KPT 2.7075 - 72 + 1 2.487 81446.0 0.4799999892711639 1686 4151 5836 HBL1_DMSO_200M_050219_2,5839 HBL1_DMSO_200M_050219_2,5839,KPAATTRVPL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 5842 30.308 800.0 119760.0 25 0 10588.0 -1 EKGKQILMK 9 92 545.817973790653 1089.621394648106 2 545.8179809451103 MULTI CID FTMS 0 0 0 5841 78738.90625 0.1662483370349693 -13 0.2466163635253906 1 Oxidation (M) _EKGKQILM(Oxidation (M))K_ ENSG00000198515|ENST00000514170|CNGA1 6.723162845929126 0.6799819581413107 4 {M(Oxidation (M))|F}K 2 -1 17.854 0.0 0.0 1.6385 0.0 0.0 796.480233614706 0.0 796.480233614706 0.0 0.418727718234404 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.1923877696554315 {M(Oxidation (M))|F}K 1.6385 + + 69 + 1 2.487 79134.2 0.5199999809265137 1687 4153 5841 HBL1_DMSO_200M_050219_2,5842 HBL1_DMSO_200M_050219_2,5842,EKGKQILMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5843 30.314 336.0 278940.0 25 0 35833.0 + 18385 KVRDLEVK 8 111 493.8033790323451 985.5922051314902 2 493.8033630251884 MULTI CID FTMS 0 0 0 5841 244287.390625 1.0 0 0.0 2 Unmodified _KVRDLEVK_ REV__ENSG00000155363|ENST00000369645|MOV10;REV__ENST00000468624.5_1_1:113217534-113241292:+|nuORF;REV__ENST00000496577.5_1_1:113231344-113241292:+|nuORF;REV__nc|ENSG00000155363|Q9HCE1-2|MOV10 27.628801355627647 0.4629596117395134 4 {M(Oxidation (M))|F}TVK 4 -1 48.928 0.0 0.0 4.9643 0.0 0.0 492.294725486525 0.0 492.294725486525 0.0 21.74381402923105 0.0 0.0 0 1.5 0.0 0.5 0.0 {M(Oxidation (M))|F}TVK 4.9643 - 265 1 2.487 75177.8 1.0 1688 4153 5841 HBL1_DMSO_200M_050219_2,5843 HBL1_DMSO_200M_050219_2,5843,KVRDLEVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5844 30.328 800.0 169630.0 25 0 9298.9 + 41141 VPAHGHPVI 9 121 463.76406987633095 925.513586819462 2 463.7638732790947 MULTI CID FTMS 0 0 0 5841 140150.84375 0.8379689502310389 -8 0.1360492706298828 3 Unmodified _VPAHGHPVI_ ENSG00000132467|ENST00000254803|UTP3 67.34385681178166 0.0221257235307089 4 VPAH{[HG]|PP}PV{I|L} 9 0 + 60.382 0.0 0.0 6.5242 6.5242 85.46 0.0 0.0 0.0 7.610006921720441 7.610006921720441 7.610006921720441 7.610006921720441 0 2.475529563821533 1.6989700043360187 0.0 0.0 + + VPAH{[HG]|PP}PV{I|L};[VP]AH{[HG]|PP}PV{I|L};[PA]VH{[HG]|PP}PV{I|L};{[HG]|PP}HAPVPV{I|L};{[HG]|PP}HAPPVV{I|L};{[DA]|[EG]}{I|L}{[CP]|[EA]}VPV{I|L};[PA]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RH]V{I|L};{[DA]|[EG]}{I|L}{[CP]|[EA]}PVV{I|L};{[HG]|PP}[{I|L}P]{[HG]|PP}PV{I|L};{[HG]|PP}[R{I|L}][MT]V{I|L} 6.5242;5.7019;3.5596;3.4473;2.6631;2.1271;1.4285;1.3429;1.2875;0.40648 +;+;-;-;-;-;-;-;-;- + 269 + 1 2.487 110935.2 0.6200000047683716 1689 4153 5841 HBL1_DMSO_200M_050219_2,5844 HBL1_DMSO_200M_050219_2,5844,VPAHGHPVI True True VPAHGHPVI 30.328118 463.763873279095 4215062.5 5841.0 ENSG00000132467|ENST00000254803|UTP3 6.344096183776856 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5845 30.342 800.0 195330.0 25 0 31641.0 + 4492 DAYEYKKRL 9 126 395.8794236519308 1184.6164415559924 3 396.2127868533134 MULTI CID FTMS 0 0 0 5841 96065.828125 0.789131995787249 -4 0.0894317626953125 4 Unmodified _DAYEYKKRL_ ENSG00000124383|ENST00000244230|MPHOSPH10 23.80106514851385 0.2283505500606397 4 DAYEYKKR{I|L} 9 0 + 62.206 0.0 0.0 5.2511 5.2511 87.99 0.0 0.0 0.0 44.418951663995344 0.7159796350266276 0.7159796350266276 62.20554861391656 0 0.25 1.5228787452803376 0.5 0.0 + + DAYEYKKR{I|L} 5.2511 + + 84 + 1 2.487 124654.8 0.4600000083446502 1690 4153 5841 HBL1_DMSO_200M_050219_2,5845 HBL1_DMSO_200M_050219_2,5845,DAYEYKKRL False True DAYEYKKRL 30.341935 396.212786853313 1058272.5 5841.0 ENSG00000124383|ENST00000244230|MPHOSPH10 6.402377923329671 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5847 30.347 63.0 782110.0 25 0 93203.0 -1 LPGMLCAGYP 10 53 539.7545000081831 1077.494447083166 2 539.7549316287041 MULTI CID FTMS 0 0 0 5846 785295.0 0.4708591112425224 14 -0.353616714477539 1 Carbamidomethyl (C) _LPGMLC(Carbamidomethyl (C))AGYP_ ENSG00000178226|ENST00000268281|PRSS36;nc|ENSG00000178226|Q5K4E3-2|PRSS36;nc|ENSG00000178226|Q5K4E3-3|PRSS36 12.531546534597751 0.6372748319968624 4 {I|L}PVG 4 -1 49.725 0.0 0.0 4.6149 0.0 0.0 0.0 708.2448214166624 708.2448214166624 38.30481392825634 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 {I|L}PVG 4.6149 - 16 + 1 2.487 46948.4 1.0 1691 4154 5846 HBL1_DMSO_200M_050219_2,5847 HBL1_DMSO_200M_050219_2,5847,LPGMLCAGYP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5848 30.349 107.0 413180.0 25 0 61597.0 + 36383 SYQESTKQL 9 82 542.2696712092883 1082.5247894853765 2 542.2698242068291 MULTI CID FTMS 0 0 0 5846 422622.21875 0.0776283167094524 14 -0.353616714477539 2 Unmodified _SYQESTKQL_ ENSG00000124422|ENST00000261497|USP22;ENSG00000247746|ENST00000500968|USP51;ENSG00000273820|ENST00000621775|USP27X;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22 70.33199760932243 0.0209706178985989 4 {[{M(Oxidation (M))|F}C]|[YS]}QESTKQ{I|L} 9 0 + 60.245 0.0 0.0 5.5652 5.5652 83.877 0.0 0.0 0.0 39.88927373496995 16.01320047996861 16.01320047996861 9.208187539523747 0 1.3494850021680094 0.0 0.5 1.4361818737241734 + + {[{M(Oxidation (M))|F}C]|[YS]}QESTKQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]ESTKQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QESTK[AG]{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]ESTK[AG]{I|L};{[{M(Oxidation (M))|F}C]|[YS]}Q[WM]KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QY[PG]KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QY[KP]GQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QE[{I|L}P]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG][WM]KQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]Y[PG]KQ{I|L} 5.5652;4.7146;4.4324;3.5858;3.0285;2.9081;2.63;2.1894;2.1729;2.0574 +;-;-;-;-;-;-;-;-;- + 278 + 1 2.487 42995.3 1.0 1692 4154 5846 HBL1_DMSO_200M_050219_2,5848 HBL1_DMSO_200M_050219_2,5848,SYQESTKQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5849 30.351 77.0 1118400.0 25 0 108210.0 15346 IPLTLHTV 8 99 447.2761269222121 892.5377009112242 2 447.2763854861259 MULTI CID FTMS 0 0 0 5846 803384.3125 0.2182709628541564 -29 0.6893234252929688 3 Unmodified _IPLTLHTV_ ENSG00000039600|ENST00000265007|SOX30;nc|ENSG00000039600|O94993-2|SOX30 32.116972079565 0.368454113111938 4 {I|L}PP 3 6 50.445 0.0 0.0 5.6519 0.0 0.0 0.0 582.3258677150137 582.3258677150137 34.52771224684248 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PP 5.6519 - 234 + 1 2.487 69488.2 1.0 1693 4154 5846 HBL1_DMSO_200M_050219_2,5849 HBL1_DMSO_200M_050219_2,5849,IPLTLHTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5850 30.354 176.0 343760.0 25 0 54932.0 + 43129 VYPERSTSY 9 68 551.2641634404746 1100.513773947749 2 551.2642700076103 MULTI CID FTMS 0 0 0 5846 338251.0 0.108901587865775 25 -0.7301368713378906 4 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 27.628801355627647 0.1796483985696185 4 VYPE 4 5 54.68 0.0 0.0 4.9686 0.0 0.0 0.0 609.2633761041624 609.2633761041624 39.10728139283883 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VYPE 4.9686 + + 26 + 1 2.487 51808.1 1.0 1694 4154 5846 HBL1_DMSO_200M_050219_2,5850 HBL1_DMSO_200M_050219_2,5850,VYPERSTSY False True VYPERSTSY 30.354414 551.26427000761 210718900.0 5846.0 ENST00000603963.1_1_12:120899824-120902572:-|nuORF;;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;;ENSG00000111786|ENST00000229390|SRSF9 8.015006065368652 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5852 30.361 213.0 293310.0 25 0 26036.0 -1 LPPPPPPAM 9 99 466.74926325411946 931.4839735750388 2 466.7491332888603 MULTI CID FTMS 0 0 0 5851 173673.296875 0.2810054842517877 41 -1.2345466613769531 1 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 79.93452657146344 0.0175326119056068 4 [{I|L}P]PPPPPA{M(Oxidation (M))|F} 9 -1 + 59.024 0.0 0.0 6.3366 6.3366 89.131 0.0 0.0 0.0 14.903157130787632 14.903157130787632 14.903157130787632 12.547932899010078 0 1.7931576817365436 1.5228787452803376 0.0 0.0 [{I|L}P]PPPPPA{M(Oxidation (M))|F};[{I|L}P][YK]PPA{M(Oxidation (M))|F};[{I|L}P]PPPP[WE];[{I|L}P]PP[YK]A{M(Oxidation (M))|F};[{I|L}P][YK]P[WE];[YK]{I|L}PP[WE];{[HG]|PP}P{I|L}PP[WE];[{I|L}P]P[YK][WE];{[HG]|PP}{I|L}PPP[WE];[{I|L}P]QQ[KT]A{M(Oxidation (M))|F} 6.3366;4.9895;4.7366;3.8842;3.2579;2.5417;2.4794;2.3081;2.2185;2.2082 +;-;-;-;-;-;-;-;-;- + 345 + 1 2.487 55934.1 1.0 1695 4155 5851 HBL1_DMSO_200M_050219_2,5852 HBL1_DMSO_200M_050219_2,5852,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5853 30.37 499.0 176060.0 25 0 18741.0 + 41213 VPEYIELM 8 95 497.2539101224504 992.4932673117008 2 497.2542602419853 MULTI CID FTMS 0 0 0 5851 121009.7734375 0.0878469310548938 -14 0.2935371398925781 2 Unmodified _VPEYIELM_ REV__ENSG00000108622|ENST00000579788|ICAM2 32.116972079565 0.368454113111938 4 VPESS 5 -1 68.214 0.0 0.0 6.873 0.0 0.0 0.0 490.2416170709594 490.2416170709594 37.27223371580885 0.0 0.0 0.0 0 0.9436726795685342 1.6989700043360187 0.805462187404089 0.0 VPESS 6.873 - 282 + 1 2.487 72628.7 1.0 1696 4155 5851 HBL1_DMSO_200M_050219_2,5853 HBL1_DMSO_200M_050219_2,5853,VPEYIELM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5854 30.373 151.0 647830.0 25 0 66089.0 + 45019 YPTRENKE 8 80 518.7561024368582 1035.4976519405163 2 518.7565185427666 MULTI CID FTMS 0 0 0 5851 455695.40625 0.76831273400149 -9 0.1938362121582031 3 Unmodified _YPTRENKE_ REV__ENSG00000058335|ENST00000558480|RASGRF1;REV__ENST00000560334.5_1_15:79271198-79356973:-|nuORF;REV__nc|ENSG00000058335|Q13972-2|RASGRF1;REV__nc|ENSG00000058335|Q13972|RASGRF1 44.40701690623563 0.1655546087385432 4 YPESN 5 -1 66.23 0.0 0.0 6.396 0.0 0.0 0.0 442.2421053522094 442.2421053522094 59.24024714504206 0.0 0.0 0.0 0 0.6505149978319906 1.3979400086720375 0.8494850021680094 0.3807196863200844 YPESN 6.396 - 55 + 1 2.487 80819.9 1.0 1697 4155 5851 HBL1_DMSO_200M_050219_2,5854 HBL1_DMSO_200M_050219_2,5854,YPTRENKE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5855 30.377 217.0 408090.0 25 0 71330.0 + 16742 KFIDRKSSL 9 90 365.2172817330298 1092.6300157992894 3 365.2171813845634 MULTI CID FTMS 0 0 0 5851 302260.34375 0.8249325628767805 -4 0.1059226989746093 4 Unmodified _KFIDRKSSL_ ENSG00000126756|ENST00000333119|UXT;ENST00000376964.3_1_X:47516580-47516661:-|nuORF;nc|ENSG00000126756|Q9UBK9-2|UXT 18.721224879955976 0.3299216912490967 4 K{I|L}{M(Oxidation (M))|F}D{I|L} 5 6 46.983 0.0 0.0 4.2999 0.0 0.0 0.0 473.2459810846313 473.2459810846313 26.01342204748164 0.0 0.0 0.0 0 0.3494850021680094 0.0 1.1549471895720984 0.0 K{I|L}{M(Oxidation (M))|F}D{I|L} 4.2999 - 199 + 1 2.487 75658.8 1.0 1698 4155 5851 HBL1_DMSO_200M_050219_2,5855 HBL1_DMSO_200M_050219_2,5855,KFIDRKSSL False True KFIDRKSSL 30.376893 365.217181384563 2599415.0 5851.0 ENSG00000126756|ENST00000333119|UXT;;ENST00000376964.3_1_X:47516580-47516661:-|nuORF;;nc|ENSG00000126756|Q9UBK9-2|UXT 3.412093162536621 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5858 30.395 642.0 205670.0 25 0 17540.0 + 17561 KPQLVERAL 9 148 351.8860114006839 1052.6362048022518 3 351.8852111697197 MULTI CID FTMS 0 0 0 5857 103068.7578125 0.7239804058631828 -4 0.0890636444091796 1 Unmodified _KPQLVERAL_ REV__ENST00000424518.5_1_12:54357896-54358059:-|nuORF 14.838274106304384 0.4350285940865338 4 A{I|L} 2 -1 20.992 0.0 0.0 1.9942 0.0 0.0 850.5027486409056 0.0 850.5027486409056 0.0 3.55690898099267 0.0 0.0 0 0.5418727718234408 0.0 0.0 0.0 A{I|L} 1.9942 + + 61 1 2.487 107604.4 1.0 1699 4157 5857 HBL1_DMSO_200M_050219_2,5858 HBL1_DMSO_200M_050219_2,5858,KPQLVERAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5859 30.401 332.0 199380.0 25 0 41126.0 24922 MPPKAGQTI 9 86 471.7566710214138 941.4987891096276 2 471.7564880251884 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _MPPKAGQTI_ ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB;nc|ENSG00000170322|Q6P4R8-3|NFRKB 18.1463463914782 0.3454829746528889 4 MPP[RV]ET{I|L} 8 4 + 47.626 0.0 0.0 5.0585 5.0585 86.815 0.0 0.0 0.0 33.646387799684874 0.4330502818412185 0.4330502818412185 47.62578788640525 0 0.25 2.0 0.0 0.0 MPP[RV]ET{I|L} 5.0585 - 92 + 1 2.487 56334.7 1.0 1700 4157 5857 HBL1_DMSO_200M_050219_2,5859 HBL1_DMSO_200M_050219_2,5859,MPPKAGQTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5860 30.414 800.0 77254.0 25 0 4659.1 + 24733 MPDSDSASSDV 11 112 555.7161449256914 1109.4177369181828 2 555.7164794802666 MULTI CID FTMS 0 0 0 5857 93553.8125 0.705322926066152 -21 0.4684734344482422 3 Unmodified _MPDSDSASSDV_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 9.38312468134398 0.8308777417566128 4 MP 2 -1 39.706 0.0 0.0 3.579 0.0 0.0 0.0 878.3011568658811 878.3011568658811 25.726825097560425 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 MP 3.579 + + 241 + 1 2.487 53056.3 0.5299999713897705 1701 4157 5857 HBL1_DMSO_200M_050219_2,5860 HBL1_DMSO_200M_050219_2,5860,MPDSDSASSDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5862 30.419 26.0 1686800.0 25 0 124070.0 + 14321 IEPREVGEA 9 70 500.25904055705394 998.503528180908 2 500.2589904665947 MULTI CID FTMS 0 0 0 5861 2096070.5 0.971366843512666 2 -0.0374126434326171 1 Unmodified _IEPREVGEA_ REV__ENSG00000164304|ENST00000502583|CAGE1;REV__nc|ENSG00000164304|Q8TC20-2|CAGE1;REV__nc|ENSG00000164304|Q8TC20-3|CAGE1;REV__nc|ENSG00000164304|Q8TC20-4|CAGE1;REV__nc|ENSG00000164304|Q8TC20|CAGE1 20.453626601364224 0.2830276176381075 4 {[DA]|[EG]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K 6 -1 40.29 0.0 0.0 4.0351 0.0 0.0 0.0 350.15879236392817 350.15879236392817 13.846886630380697 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3807196863200844 {[DA]|[EG]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K 4.0351 - 163 + 1 2.487 40984.5 1.0 1702 4158 5861 HBL1_DMSO_200M_050219_2,5862 HBL1_DMSO_200M_050219_2,5862,IEPREVGEA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5863 30.422 150.0 381370.0 25 0 48752.0 22463 LPVEGGFWAC 10 81 360.1721800810324 1077.4947108432973 3 360.1721679568291 MULTI CID FTMS 0 0 0 5861 327558.6875 0.3626011667992391 16 -0.5145168304443359 2 Unmodified _LPVEGGFWAC_ ENSG00000169738|ENST00000306869|DCXR;ENST00000577286.5_1_17:79993838-79994415:-|nuORF;ENST00000579842.5_1_17:79993838-79994531:-|nuORF 14.838274106304384 0.5985701837916485 4 {I|L}PVV{M(Oxidation (M))|F}Y 6 6 47.133 0.0 0.0 4.3743 0.0 0.0 0.0 356.11493860416255 356.11493860416255 26.88715277282561 0.0 0.0 0.0 0 0.3054621874040891 1.0457574905606752 0.0 0.0 {I|L}PVV{M(Oxidation (M))|F}Y 4.3743 - 62 + 1 2.487 59201.8 1.0 1703 4158 5861 HBL1_DMSO_200M_050219_2,5863 HBL1_DMSO_200M_050219_2,5863,LPVEGGFWAC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5864 30.425 142.0 373590.0 25 0 25604.0 + -1 TPMPMILP 8 92 466.2366368969576 930.4587208607152 2 466.2370788455009 MULTI CID FTMS 0 0 0 5861 210856.671875 0.515396714663784 -8 0.1816692352294922 3 2 Oxidation (M) _TPM(Oxidation (M))PM(Oxidation (M))ILP_ REV__nc|ENSG00000176046|O60356-2|NUPR1 22.4526382665184 0.5719518724627818 4 TP{M(Oxidation (M))|F}GP 5 -1 49.447 0.0 0.0 5.3142 0.0 0.0 0.0 428.2282503717407 428.2282503717407 22.72034022175138 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 TP{M(Oxidation (M))|F}GP 5.3142 - 239 + 1 2.487 46569.6 1.0 1704 4158 5861 HBL1_DMSO_200M_050219_2,5864 HBL1_DMSO_200M_050219_2,5864,TPMPMILP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5865 30.432 378.0 102290.0 25 0 6405.5 + 4397 DAVQNVHSV 9 85 484.7429876700695 967.471422406939 2 484.7428466677666 MULTI CID FTMS 0 0 0 5861 84101.1328125 0.8203039719908006 6 -0.1214942932128906 4 Unmodified _DAVQNVHSV_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000426186.1_3_2:87098444-87121919:+|nuORF;ENST00000447760.1_1_2:106986223-106992976:+|nuORF 19.256988751693697 0.3154191944385105 4 QA 2 8 16.326 0.0 0.0 1.6875 0.0 0.0 285.1257325649453 480.2064303033813 765.3321628683266 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.5 QA 1.6875 - 51 + 1 2.487 36259.1 1.0 1705 4158 5861 HBL1_DMSO_200M_050219_2,5865 HBL1_DMSO_200M_050219_2,5865,DAVQNVHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5866 30.446 800.0 79834.0 25 0 6839.5 15613 IQASDSSWKGQ 11 84 603.7915223179472 1205.5684917026942 2 603.7912475466728 MULTI CID FTMS 0 0 0 5861 82322.3984375 0.3895424638955004 -8 0.1816692352294922 5 Unmodified _IQASDSSWKGQ_ ENSG00000009790|ENST00000367025|TRAF3IP3;nc|ENSG00000009790|Q9Y228-2|TRAF3IP3;nc|ENSG00000009790|Q9Y228-3|TRAF3IP3 18.373094154950223 0.6529654022026722 4 [HQ]VD[TP]EPV{[QG]|[NA]} 11 8 + 44.921 0.0 0.0 3.7261 3.7261 76.198 0.0 0.0 0.0 9.203103093438962 9.770538683820044 9.203103093438962 9.203103093438962 0 0.718765315847925 0.0 1.3494850021680094 0.6747425010840047 [HQ]VD[TP]EPV{[QG]|[NA]};[VP]GG[WY]E[{I|L}T]{[QG]|[NA]};[VP]N[WY]E[{I|L}T]{[QG]|[NA]} 3.7261;2.9627;2.667 -;-;- 201 1 2.487 51073.6 0.4300000071525574 1706 4158 5861 HBL1_DMSO_200M_050219_2,5866 HBL1_DMSO_200M_050219_2,5866,IQASDSSWKGQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5868 30.45 14.0 3885200.0 25 0 391390.0 + 38133 TPMGPGRTV 9 68 458.2391035184713 914.4636541037428 2 458.2395202517509 MULTI CID FTMS 0 0 0 5867 4408339.5 0.6884016764288134 -4 0.0912628173828125 1 Unmodified _TPMGPGRTV_ ENSG00000116977|ENST00000366584|LGALS8;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;nc|ENSG00000116977|O00214-2|LGALS8 31.26834338654808 0.1333407332142048 4 TPMG 4 5 63.928 0.0 0.0 6.9908 0.0 0.0 0.0 525.2799973004278 525.2799973004278 50.51152522447381 0.0 0.0 0.0 0 1.1989700043360187 2.0 0.0 0.0 + TPMG 6.9908 + + 79 + 1 2.494 49008.9 1.0 1707 4159 5867 HBL1_DMSO_200M_050219_2,5868 HBL1_DMSO_200M_050219_2,5868,TPMGPGRTV False True TPMGPGRTV 30.45047 458.239520251751 129468360.0 5867.0 ENSG00000116977|ENST00000366584|LGALS8;;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;;nc|ENSG00000116977|O00214-2|LGALS8 3.6866242090861 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5869 30.452 58.0 851670.0 25 0 112380.0 4312 DARNPPVV 8 84 434.23917972823335 866.4638065232667 2 434.2388488650322 MULTI CID FTMS 0 0 0 5867 569142.3125 0.9183280644863308 2 -0.0102214813232421 2 Unmodified _DARNPPVV_ ENSG00000120915|ENST00000521400|EPHX2;nc|ENSG00000120915|P34913-2|EPHX2;nc|ENSG00000120915|P34913-3|EPHX2 19.256988751693697 0.6264283240490721 4 [PA][C(Carbamidomethyl (C))K]PPVV 8 3 + 32.625 0.0 0.0 3.7653 3.7653 69.578 0.0 0.0 0.0 2.4865124202832334 9.821071206546035 2.4865124202832334 3.290587192642249 0 0.4731975075880329 1.3010299956639813 0.0 0.4247425010840047 [PA][C(Carbamidomethyl (C))K]PPVV;{[NV]|[RG]}QDPPVV;{[NV]|[RG]}ENPPVV;[PA]PP[C(Carbamidomethyl (C))K]VV;[PA]P[C(Carbamidomethyl (C))K]PVV;{[NV]|[RG]}[AG]DPPVV;{[NV]|[RG]}EGGPPVV;{[HG]|PP}AP[C(Carbamidomethyl (C))K]VV;{[HG]|PP}A[C(Carbamidomethyl (C))K]PVV 3.7653;3.3855;3.105;2.8996;2.7899;2.3165;2.036;1.3981;1.2884 -;-;-;-;-;-;-;-;- 159 1 2.494 42886.8 1.0 1708 4159 5867 HBL1_DMSO_200M_050219_2,5869 HBL1_DMSO_200M_050219_2,5869,DARNPPVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5872 30.472 800.0 211660.0 25 0 32527.0 + 29676 QPATPTRTI 9 149 492.7773747405869 983.5401965479738 2 492.7780944705009 MULTI CID FTMS 0 0 0 5871 112797.453125 0.0961236521719493 25 -0.8577289581298828 1 Unmodified _QPATPTRTI_ ENSG00000143190|ENST00000367866|POU2F1;nc|ENSG00000143190|P14859-2|POU2F1;nc|ENSG00000143190|P14859-3|POU2F1;nc|ENSG00000143190|P14859-4|POU2F1;nc|ENSG00000143190|P14859-5|POU2F1;nc|ENSG00000143190|P14859|POU2F1 22.65808497894818 0.2428932432760099 4 [QP]ATP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VK 9 4 + 30.128 0.0 0.0 3.0633 3.0633 68.597 0.0 0.0 0.0 7.147642715192507 3.90527933694586 3.90527933694586 3.90527933694586 0 0.0 0.0 0.805462187404089 0.2742275032520141 [QP]ATP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VK;[QP]ATPTRT{I|L};[QP]ATPK{[QS]|[NT]}K;[QP]ATP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KV;[SG]VE[HK]TVK;[SG]V[PG]P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VK;[SG]VT[{I|L}P][WP]K;[SG]V[PG]PTRT{I|L};[SG]VTA[{I|L}T][HA]K;[QP]{[RE]|[WV]}{NN|[MP]|[D{I|L}]|[EV]}VK 3.0633;2.6662;2.4511;2.3246;1.5329;1.4384;1.0978;1.0413;0.97078;0.94877 -;+;-;-;-;-;-;-;-;- + 526 + 1 2.494 131108.2 0.6299999952316284 1709 4161 5871 HBL1_DMSO_200M_050219_2,5872 HBL1_DMSO_200M_050219_2,5872,QPATPTRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5873 30.475 151.0 596670.0 25 0 60059.0 + 41143 VPAHGHPVI 9 113 309.51191886951915 925.5139272087574 3 309.5115234255791 MULTI CID FTMS 0 0 0 5871 286493.1875 0.8389829213314924 2 -0.0730133056640625 2 Unmodified _VPAHGHPVI_ ENSG00000132467|ENST00000254803|UTP3 13.90604991867851 0.4602628045680013 4 [VP][R{M(Oxidation (M))|F}]AP 6 6 23.645 0.0 0.0 2.5548 0.0 0.0 0.0 255.1364912428989 255.1364912428989 10.546218740408904 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VP][R{M(Oxidation (M))|F}]AP 2.5548 - 76 1 2.494 77981.1 1.0 1710 4161 5871 HBL1_DMSO_200M_050219_2,5873 HBL1_DMSO_200M_050219_2,5873,VPAHGHPVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5874 30.489 800.0 221340.0 25 0 14390.0 + 5718 DPLKATHAV 9 167 476.2670737755682 950.5195946179364 2 476.2672302126884 MULTI CID FTMS 0 0 0 5871 129020.078125 0.9310327759130956 -2 0.0102214813232421 3 Unmodified _DPLKATHAV_ ENSG00000113163|ENST00000643780|CERT1;nc|ENSG00000113163|Q9Y5P4-2|CERT1;nc|ENSG00000113163|Q9Y5P4-3|CERT1 32.037481411007896 0.1235546156350648 4 [DP]{I|L}[TA]KHAV 9 2 + 50.164 0.0 0.0 5.2775 5.2775 84.597 0.0 0.0 0.0 6.403763153726331 27.50869542769378 6.403763153726331 11.99331102496918 0 0.8996498648046138 1.5228787452803376 0.086696871556164 0.0 [DP]{I|L}[TA]KHAV;[{I|L}P]D[TA]KHAV;[DP]{I|L}KPPWV;[{I|L}P][HK]{[ES]|[DT]|[{I|L}C]}AAV;[{I|L}P][KT]{[DA]|[EG]}HAV;DP{I|L}WV[KP]P;[{I|L}P][HK][TA]DAV;{NN|[MP]|[D{I|L}]|[EV]}P[TA]KHAV;[{I|L}P][KT][HD]AAV;[{I|L}P]{[WT]|[RM]}{[HG]|PP}AAV 5.2775;4.0158;3.7754;3.5207;3.4998;3.2943;3.0585;3.038;2.5451;2.5451 -;-;-;-;-;-;-;-;-;- 1404 1 2.494 133273.5 0.6399999856948853 1711 4161 5871 HBL1_DMSO_200M_050219_2,5874 HBL1_DMSO_200M_050219_2,5874,DPLKATHAV True True DPLKATHAV 30.489063 476.267230212688 1264907.25 5871.0 nc|ENSG00000113163|Q9Y5P4-3|CERT1;;ENSG00000113163|ENST00000643780|CERT1;;nc|ENSG00000113163|Q9Y5P4-2|CERT1 5.3391194343566895 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5876 30.494 36.0 1435300.0 25 0 262300.0 + 12539 GVGPVPARA 9 61 412.2429195084503 822.4712860837005 2 412.2428161501884 MULTI CID FTMS 0 0 0 5875 1315188.125 0.4132331718760113 9 -0.356637954711914 1 Unmodified _GVGPVPARA_ ENSG00000129636|ENST00000320640|ITFG1 28.486842064014134 0.1687311288560894 4 [VG]GPV 5 4 48.456 0.0 0.0 5.8915 0.0 0.0 0.0 410.2157574200607 410.2157574200607 28.1651564221918 0.0 0.0 0.0 0 0.6237125054200234 2.0 0.0 0.0 + [VG]GPV 5.8915 + + 52 + 1 2.494 49472.3 1.0 1712 4162 5875 HBL1_DMSO_200M_050219_2,5876 HBL1_DMSO_200M_050219_2,5876,GVGPVPARA False True GVGPVPARA 30.493851 412.242816150188 87375216.0 5875.0 ENSG00000129636|ENST00000320640|ITFG1 4.6532033284505205 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5877 30.501 418.0 157170.0 25 0 16121.0 + 31385 RNVSTGDVNVE 11 81 595.2937860712003 1188.5730192092003 2 595.2939941287041 MULTI CID FTMS 0 0 0 5875 205624.59375 0.6158879755591207 4 -0.116119384765625 2 Unmodified _RNVSTGDVNVE_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 24.95707706330732 0.5062028554934599 4 {[NV]|[RG]}RSTGDVNVE 11 2 + 64.997 0.0 0.0 5.4685 5.4685 82.537 0.0 0.0 0.0 5.862435673934286 58.00753267355003 5.862435673934286 9.128498242811006 0 1.0 0.0 0.0 0.3807196863200844 {[NV]|[RG]}RSTGDVNVE;{[NV]|[RG]}RSTGDVGGVE;[KG][RD]TGDVNVE;{[NV]|[RG]}RSWWNVE;{M(Oxidation (M))|F}VNV[WE][PA]VE;{M(Oxidation (M))|F}VNVD{[TV]|[{I|L}S]}[PA]VE;[VS][RN]TGDVNVE;[DV]{[TV]|[{I|L}S]}[WE]VNVE;[KG][RD]TGDVGGVE;{[NV]|[RG]}RSWWGGVE 5.4685;4.7005;4.3975;4.0309;3.9924;3.9576;3.9576;3.6397;3.6295;3.2562 -;-;-;-;-;-;-;-;-;- 350 1 2.494 53540.9 1.0 1713 4162 5875 HBL1_DMSO_200M_050219_2,5877 HBL1_DMSO_200M_050219_2,5877,RNVSTGDVNVE False True RNVSTGDVNVE 30.501307 595.293994128704 4474316.0 5875.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 8.574485143025717 2.0 True 11.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 5878 30.515 800.0 207830.0 25 0 15198.0 + 2510 ARRSPPTHDL 10 130 383.8764582407287 1148.6075453223862 3 383.8760253787041 MULTI CID FTMS 0 0 0 5875 124360.203125 0.3099216879564587 -7 0.1346435546875 3 Unmodified _ARRSPPTHDL_ REV__ENSG00000101187|ENST00000217159|SLCO4A1;REV__nc|ENSG00000101187|Q96BD0-2|SLCO4A1;REV__nc|ENSG00000101187|Q96BD0-3|SLCO4A1;REV__nc|ENSG00000101187|Q96BD0-4|SLCO4A1 10.823927491677226 0.6659270209832991 4 [VP]{[NV]|[RG]}T[W{I|L}]K{I|L} 9 -1 21.282 0.0 0.0 1.8529 0.0 0.0 0.0 94.9551387783055 94.9551387783055 1.8180373105442345 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.8494850021680094 0.4247425010840047 [VP]{[NV]|[RG]}T[W{I|L}]K{I|L} 1.8529 - 91 1 2.494 137164.6 0.4900000095367431 1714 4162 5875 HBL1_DMSO_200M_050219_2,5878 HBL1_DMSO_200M_050219_2,5878,ARRSPPTHDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5879 30.529 800.0 15161.0 25 0 1820.7 -1 0 31 983.7478351467652 2948.221676040496 3 984.417041003704 MULTI CID FTMS 0 0 0 5875 82014.140625 1.0 0 0.0 4 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.494 17110.6 0.3700000047683716 1715 4162 5875 HBL1_DMSO_200M_050219_2,5879 HBL1_DMSO_200M_050219_2,5879, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5881 30.534 54.0 920560.0 25 0 100340.0 + 32136 RVPETVADA 9 69 479.2536089249196 956.4926649166392 2 479.2537109255791 MULTI CID FTMS 0 0 0 5880 1149619.25 0.976679574434464 -1 0.0398540496826171 1 Unmodified _RVPETVADA_ ENSG00000137714|ENST00000260270|FDX1;ENST00000449115.1_1_20:33063731-33063836:-|nuORF 45.69961567697781 0.0497987121815769 4 {[DA]|[EG]}V[VP]TVAW 9 5 + 59.715 0.0 0.0 6.2431 6.2431 88.65 0.0 0.0 0.0 12.272437815030628 12.272437815030628 12.272437815030628 12.272437815030628 0 0.8807196863200843 1.3979400086720375 0.805462187404089 0.0 {[DA]|[EG]}V[VP]TVAW;[RV][EP]TVA{[DA]|[EG]};[YK][YK]VA{[DA]|[EG]} 6.2431;4.9601;2.3474 -;+;- + 50 1 2.494 43034.4 1.0 1716 4163 5880 HBL1_DMSO_200M_050219_2,5881 HBL1_DMSO_200M_050219_2,5881,RVPETVADA True True RVPETVADA 30.533705 479.253710925579 21576752.0 5880.0 ENST00000449115.1_1_20:33063731-33063836:-|nuORF;;ENSG00000137714|ENST00000260270|FDX1 6.288911024729411 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5882 30.536 111.0 574000.0 25 0 90285.0 + 33264 SFPASSGVSH 10 84 488.23034326897925 974.4461336047584 2 488.2305175662041 MULTI CID FTMS 0 0 0 5880 439168.0625 0.5960258154133143 54 -1.7447872161865234 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 49.93300154707207 0.0805441195901191 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 64.403 0.0 0.0 6.6092 6.6092 90.289 0.0 0.0 0.0 35.16257482205354 1.3895309840842174 1.3895309840842174 12.971062485323516 0 0.3807196863200844 2.0 1.075257498915995 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YV]EPH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[YV]PDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RN]{NN|[MP]|[D{I|L}]|[EV]}SH;{[QN]|[E{I|L}]|[KN]}[KQ]SH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[PA][WP]C[PA]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}{NN|[MP]|[D{I|L}]|[EV]}[RN]DT 6.6092;5.2781;4.1163;3.558;3.4062;0.98525;0.49675;0.38707 +;-;-;-;-;-;-;- + 247 + 1 2.494 54469.7 1.0 1717 4163 5880 HBL1_DMSO_200M_050219_2,5882 HBL1_DMSO_200M_050219_2,5882,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5884 30.541 36.0 1469100.0 25 0 183320.0 + 39484 VARPGGDTI 9 72 443.2429770873452 884.4714012414904 2 443.2430602908134 MULTI CID FTMS 0 0 0 5883 1723605.25 0.8730279639968234 -1 0.0070571899414062 1 Unmodified _VARPGGDTI_ ENSG00000169567|ENST00000304043|HINT1 27.628801355627647 0.1796483985696185 4 {[VA]|[{I|L}G]}R[NP]DT{I|L} 8 2 + 50.455 0.0 0.0 5.7046 5.7046 81.089 0.0 0.0 0.0 16.202972028968716 29.016544138323468 16.202972028968716 6.409780573583319 0 1.1861818737241734 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}R[NP]DT{I|L};{[VA]|[{I|L}G]}RYYT{I|L};YY[{I|L}T]{[NV]|[RG]}{I|L} 5.7046;4.9799;0.61757 -;-;- 67 1 2.494 46274.3 1.0 1718 4164 5883 HBL1_DMSO_200M_050219_2,5884 HBL1_DMSO_200M_050219_2,5884,VARPGGDTI False True VARPGGDTI 30.540759 443.243060290813 10809959.0 5883.0 ENSG00000169567|ENST00000304043|HINT1 1.1345242460568743 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5885 30.547 371.0 249470.0 25 0 31898.0 + 34977 SQLNNNEE 8 115 474.2069793063481 946.3994056794962 2 474.2069274783134 MULTI CID FTMS 0 0 0 5883 216663.84375 1.0 0 0.0 2 Unmodified _SQLNNNEE_ REV__ENSG00000242265|ENST00000612748|PEG10;REV__nc|ENSG00000242265|Q86TG7-2|PEG10;REV__nc|ENSG00000242265|Q86TG7-3|PEG10;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7-5|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 43.85829265575387 0.1697421968005898 4 {[QS]|[NT]}[WC(Carbamidomethyl (C))]G{I|L} 6 -1 42.056 0.0 0.0 4.4438 0.0 0.0 0.0 212.0680151555428 212.0680151555428 31.875392301541368 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.6109243748081782 0.7302046884880937 {[QS]|[NT]}[WC(Carbamidomethyl (C))]G{I|L} 4.4438 - 200 1 2.494 75518.5 1.0 1719 4164 5883 HBL1_DMSO_200M_050219_2,5885 HBL1_DMSO_200M_050219_2,5885,SQLNNNEE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5886 30.561 800.0 213160.0 25 0 64087.0 -1 0 106 470.25675038547536 469.24947391887537 1 470.2568847537041 MULTI CID FTMS 0 0 0 5883 148667.0625 0.2332499538878228 32 -1.0529918670654297 3 4 [TP]AE 4 -1 21.018 0.0 0.0 4.4791 0.0 0.0 0.0 68.05135523013905 68.05135523013905 6.413960427940992 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 [TP]AE 4.4791 - 44 + 1 2.494 134943.3 0.5899999737739563 1720 4164 5883 HBL1_DMSO_200M_050219_2,5886 HBL1_DMSO_200M_050219_2,5886, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5887 30.571 579.0 200250.0 25 0 21227.0 + 3328 AYLTAATH 8 136 424.2198153762895 846.425077819379 2 424.2192870974541 MULTI CID FTMS 0 0 0 5883 139120.1875 0.9742296191149062 -2 0.0469112396240234 4 Unmodified _AYLTAATH_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 78.44472497914707 0.0986812004920242 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}TAATH 8 0 + 82.547 0.0 0.0 9.7524 9.7524 98.673 0.0 0.0 0.0 55.12431442192947 14.904630595263413 14.904630595263413 37.60426127408003 0 0.7134679910804405 2.0 1.329689690656103 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}TAATH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}T[WP]P;{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}QQQP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}QQAGP;QQAPG{I|L}AY;{[QD]|[EN]|[WG]|[KD]|[RS]}QQ{I|L}DT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQ{I|L}QP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQAAVP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQAAPV 9.7524;5.3097;3.8563;3.3597;2.6633;2.4458;2.264;2.0201;1.5606;1.4039 +;-;-;-;-;-;-;-;-;- + 266 + 1 2.494 90443.1 1.0 1721 4164 5883 HBL1_DMSO_200M_050219_2,5887 HBL1_DMSO_200M_050219_2,5887,AYLTAATH True True AYLTAATH 30.571384 424.219287097454 836189.1875 5883.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 7.40378475189209 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5888 30.585 800.0 111910.0 25 0 17600.0 17456 KPAATTRVPL 10 96 527.3243095543544 1052.634066175509 2 527.3242675662041 MULTI CID FTMS 0 0 0 5883 119138.015625 0.6315580352010411 4 -0.1596508026123047 5 Unmodified _KPAATTRVPL_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|22|2|sense 6.723162845929126 0.6955379296933136 4 KPT[WQ]KP{I|L} 8 5 25.571 0.0 0.0 2.4292 0.0 0.0 56.06237756890034 0.0 56.06237756890034 0.0 14.461856732047451 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 KPT[WQ]KP{I|L} 2.4292 - 117 + 1 2.494 78150.2 0.5400000214576721 1722 4164 5883 HBL1_DMSO_200M_050219_2,5888 HBL1_DMSO_200M_050219_2,5888,KPAATTRVPL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 5890 30.591 185.0 463040.0 25 0 58013.0 -1 EKGKQILMK 9 72 545.817973790653 1089.621394648106 2 545.8184081912041 MULTI CID FTMS 0 0 0 5889 361667.625 0.7636204778452447 -1 0.04925537109375 1 Oxidation (M) _EKGKQILM(Oxidation (M))K_ ENSG00000198515|ENST00000514170|CNGA1 7.910154910731844 0.6385446671287552 4 KTT[{I|L}P][WP]K 8 -1 27.495 0.0 0.0 2.5234 0.0 0.0 120.06149349025686 0.0 120.06149349025686 0.0 18.03138086231549 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.6643943297944485 KTT[{I|L}P][WP]K 2.5234 - 64 + 1 2.494 69231.2 1.0 1723 4165 5889 HBL1_DMSO_200M_050219_2,5890 HBL1_DMSO_200M_050219_2,5890,EKGKQILMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5891 30.605 800.0 219350.0 25 0 21326.0 + 41142 VPAHGHPVI 9 134 463.76406987633095 925.513586819462 2 463.7640869021416 MULTI CID FTMS 0 0 0 5889 115625.125 0.6913284431552532 4 -0.192636489868164 2 Unmodified _VPAHGHPVI_ ENSG00000132467|ENST00000254803|UTP3 48.345845343767074 0.0439967357579942 4 [VP]AH{[HG]|PP}PV{I|L} 9 0 + 42.945 0.0 0.0 4.6401 4.6401 82.28 0.0 0.0 0.0 0.7159714282604384 23.71786825126826 0.7159714282604384 12.754989640266452 0 1.8895840698003 1.5228787452803376 0.0 0.0 + + [VP]AH{[HG]|PP}PV{I|L};[PA]GHHVPV{I|L};[PA]H{[HG]|PP}VPV{I|L};{[HG]|PP}HAPVPV{I|L};[PA]HV{[HG]|PP}PV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HQ]VPV{I|L};[QP]HHVPV{I|L};[PA]GHHPVV{I|L};[PA]H{[HG]|PP}PVV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{[HG]|PP}VPV{I|L} 4.6401;3.2619;3.2125;2.8846;2.8843;2.6966;2.5849;2.5253;2.4759;2.3161 +;-;-;-;-;-;-;-;-;- + 382 1 2.494 136784.9 0.5899999737739563 1724 4165 5889 HBL1_DMSO_200M_050219_2,5891 HBL1_DMSO_200M_050219_2,5891,VPAHGHPVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5893 30.61 29.0 2256200.0 25 0 273770.0 + 21981 LPPPAAKTV 9 87 447.2761269222121 892.5377009112242 2 447.2762939333916 MULTI CID FTMS 0 0 0 5892 2136630.5 0.5804997549022438 -17 0.4027671813964844 1 Unmodified _LPPPAAKTV_ ENSG00000168894|ENST00000306368|RNF181;ENST00000461845.1_1_2:85822886-85823939:+|nuORF 45.69961567697781 0.0497987121815769 4 {I|L}PP[PA]AKTV 9 0 + 60.64 0.0 0.0 6.7941 6.7941 93.862 0.0 0.0 0.0 50.72505778798213 7.307323597799879 7.307323597799879 48.27872124681542 0 0.7134679910804405 2.0 1.024227503252014 0.0 + + {I|L}PP[PA]AKTV;{[HG]|PP}AAK{[TV]|[{I|L}S]}P{I|L};[PA]PAK{[TV]|[{I|L}S]}P{I|L};[KA][PA]P{[TV]|[{I|L}S]}P{I|L} 6.7941;1.3849;0.87412;0.43593 +;-;-;- + 120 + 1 2.496 57412.5 1.0 1725 4166 5892 HBL1_DMSO_200M_050219_2,5893 HBL1_DMSO_200M_050219_2,5893,LPPPAAKTV True True LPPPAAKTV 30.610016 447.276293933392 1101154208.0 5892.0 ENST00000461845.1_1_2:85822886-85823939:+|nuORF;;ENSG00000168894|ENST00000306368|RNF181 5.427285830179851 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5894 30.611 44.0 1157900.0 25 0 164550.0 + 4904 DGKQQVQVV 9 91 500.7758002866902 999.5370476401804 2 500.7746765017509 MULTI CID FTMS 0 0 0 5892 1142567.25 0.723760858149321 -3 0.0762653350830078 2 Unmodified _DGKQQVQVV_ ENSG00000068796|ENST00000407818|KIF2A;ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000068796|O00139-1|KIF2A;nc|ENSG00000068796|O00139-2|KIF2A;nc|ENSG00000068796|O00139-5|KIF2A;nc|ENSG00000068796|O00139|KIF2A;nc|ENSG00000142945|Q99661-2|KIF2C 62.57269311338072 0.0246576765497938 4 {[QV]|[N{I|L}]|[RA]|[KV]}[NS]QVQVV 9 4 + 59.802 0.0 0.0 5.9829 5.9829 73.517 0.0 0.0 0.0 0.8354605145007383 10.330145895351848 0.8354605145007383 0.8354605145007383 0 1.1069758080123702 0.958607314841775 0.6989700043360187 1.555462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}[NS]QVQVV;[AG]V[NS]QVQVV;{[QV]|[N{I|L}]|[RA]|[KV]}Q[NS]VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}VDDVQVV;[AG]Q[TA]QVQVV;[AG]VQ[NS]VQVV;[AG][TA]QQVQVV;[AG]QV[NS]VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}[NS][AG]VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}[NS]QV[AG]VV 5.9829;5.8994;5.7386;5.7342;5.6774;5.655;5.5982;5.4331;5.0617;5.0617 -;-;-;-;-;-;-;-;-;- 526 1 2.496 45681.8 1.0 1726 4166 5892 HBL1_DMSO_200M_050219_2,5894 HBL1_DMSO_200M_050219_2,5894,DGKQQVQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5895 30.614 108.0 278980.0 25 0 18117.0 + -1 CASWETTQV 9 70 541.2360378981571 1080.457522863114 2 541.2366821169853 MULTI CID FTMS 0 0 0 5892 516432.5 0.681003622631495 2 -0.0904426574707031 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))ASWETTQV_ REV__ENSG00000118523|ENST00000367976|CCN2;REV__nc|ENSG00000118523|P29279-2|CCN2 7.910154910731844 0.6385446671287552 4 [NP][MD][YN]TQV 9 -1 [NP][MD][YN]T + + 16.972 -6.9234 -0.82883 1.5709 1.5709 44.343 0.0 0.0 0.0 0.0 7.038610013562481 0.0 0.0 0 0.0 0.0 0.0 0.5 [NP][MD][YN]TQV 1.5709 - 33 + 1 2.496 32136.9 1.0 1727 4166 5892 HBL1_DMSO_200M_050219_2,5895 HBL1_DMSO_200M_050219_2,5895,CASWETTQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5896 30.62 359.0 161160.0 25 0 14952.0 + 2163 AQAELQQHDV 10 94 569.7773676598013 1137.5401823864024 2 569.7781249880791 MULTI CID FTMS 0 0 0 5892 205826.84375 0.9976707238962976 -1 0.0199527740478515 4 Unmodified _AQAELQQHDV_ ENSG00000169710|ENST00000306749|FASN 74.19965305603844 0.0188013450058842 4 [QA]AE{I|L}QQ[HD]V 10 0 + 72.321 0.0 0.0 6.3577 6.3577 86.385 0.0 0.0 0.0 55.646455987117534 6.205517744545489 6.205517744545489 9.164539485499262 0 1.424742501084005 0.8860566476931632 1.031234684152075 1.3494850021680094 + + [QA]AE{I|L}QQ[HD]V;[QA]AE{I|L}[AG]Q[HD]V;[QA]AE{I|L}Q[AG][HD]V;[QA]AE[HA]V{[QS]|[NT]}[TP];[QA]A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[WK]{M(Oxidation (M))|F};[QA]A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QN[{M(Oxidation (M))|F}T]V;[QA][MT]VQ[WK]{M(Oxidation (M))|F};[QA][MT]VQN[{M(Oxidation (M))|F}T]V;[HD]{I|L}NQV{[QS]|[NT]}[TP];[HD]{I|L}DVV{[QD]|[EN]|[WG]|[KD]|[RS]}[TP] 6.3577;5.552;5.1125;3.3171;2.5564;1.9869;1.7821;1.2126;0.16564;0.010842 +;-;-;-;-;-;-;-;-;- + 593 + 1 2.496 45498.0 1.0 1728 4166 5892 HBL1_DMSO_200M_050219_2,5896 HBL1_DMSO_200M_050219_2,5896,AQAELQQHDV True True AQAELQQHDV 30.620033 569.778124988079 1161350.5 5892.0 ENSG00000169710|ENST00000306749|FASN 9.417511304219564 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5897 30.634 800.0 195460.0 25 0 11751.0 -1 YCAVYYII 8 148 532.7600969527524 1063.5056409723047 2 532.7598754763603 MULTI CID FTMS 0 0 0 5892 147649.40625 0.7502357993231845 -3 0.0762653350830078 5 Carbamidomethyl (C) _YC(Carbamidomethyl (C))AVYYII_ ENSG00000153283|ENST00000352690|CD96;nc|ENSG00000153283|P40200|CD96 11.114462752807354 0.7467182956244686 4 [YC(Carbamidomethyl (C))][PG]PTRT{I|L} 9 -1 + 16.99 0.0 0.0 1.5975 1.5975 70.429 0.0 0.0 0.0 1.5052381731599276 5.2609644929468615 1.5052381731599276 6.778711644387911 0 0.3494850021680094 0.0 0.2614393726401688 0.0 [YC(Carbamidomethyl (C))][PG]PTRT{I|L};QW{[MS]|[{M(Oxidation (M))|F}A]}N{[QG]|[NA]}T{I|L};[YC(Carbamidomethyl (C))][PG]P{[ET]|[MV]}K{I|L};[YC(Carbamidomethyl (C))][PG]PT[{I|L}T]R;QW{[MS]|[{M(Oxidation (M))|F}A]}{[QD]|[EN]|[WG]|[KD]|[RS]}NR;QW{[MS]|[{M(Oxidation (M))|F}A]}N[DG]VK;[YC(Carbamidomethyl (C))][PG]P{[ET]|[MV]}{I|L}K 1.5975;0.96013;0.6646;0.3091;0.25956;0.12799;0.11551 -;-;-;-;-;-;- 244 + 1 2.496 120811.3 0.6100000143051147 1729 4166 5892 HBL1_DMSO_200M_050219_2,5897 HBL1_DMSO_200M_050219_2,5897,YCAVYYII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5898 30.641 406.0 171770.0 25 0 12093.0 43130 VYPERSTSY 9 106 551.2641634404746 1100.513773947749 2 551.2680541872978 MULTI CID FTMS 0 0 0 5892 144789.671875 0.0466157533126348 37 -1.265310287475586 6 Unmodified _VYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 21.53697664764585 0.2571576504437394 4 D[H{I|L}]VNAY 7 8 32.083 0.0 0.0 2.9153 0.0 0.0 270.1329823224625 0.0 270.1329823224625 0.0 15.629325833262726 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D[H{I|L}]VNAY 2.9153 - 290 1 2.496 61849.0 1.0 1730 4166 5892 HBL1_DMSO_200M_050219_2,5898 HBL1_DMSO_200M_050219_2,5898,VYPERSTSY False True RYQSTVNAY 30.641127 551.268054187298 1051943.25 5892.0 ENSG00000175567|ENST00000663595|UCP2 4.126370350519816 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5900 30.646 47.0 1328700.0 25 0 206660.0 + 41214 VPEYIELM 8 63 497.2539101224504 992.4932673117008 2 497.2538940310478 MULTI CID FTMS 0 0 0 5899 1254255.75 0.9105257804020432 -2 0.0558967590332031 1 Unmodified _VPEYIELM_ REV__ENSG00000108622|ENST00000579788|ICAM2 26.34127834903884 0.4900704351052977 4 VPESS 5 -1 63.232 0.0 0.0 6.371 0.0 0.0 0.0 490.24042688541255 490.24042688541255 35.784634594678266 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.805462187404089 0.0 VPESS 6.371 - 41 + 1 2.496 54549.8 1.0 1731 4167 5899 HBL1_DMSO_200M_050219_2,5900 HBL1_DMSO_200M_050219_2,5900,VPEYIELM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5901 30.66 800.0 123170.0 25 0 19077.0 + 22140 LPPQQQQRI 9 102 554.3167948624847 1106.6190367917693 2 554.3170654177666 MULTI CID FTMS 0 0 0 5899 69378.8515625 0.5975588519055485 3 -0.1841850280761718 2 Unmodified _LPPQQQQRI_ ENSG00000109606|ENST00000336812|DHX15;ENST00000336812.4_1_4:24550520-24550565:-|nuORF 32.30548876998284 0.1201446275138228 4 {I|L}PPQQ 5 4 59.508 0.0 0.0 5.3775 0.0 0.0 0.0 540.2880953424436 540.2880953424436 52.51857202580155 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + {I|L}PPQQ 5.3775 + + 134 + 1 2.496 84918.1 0.5199999809265137 1732 4167 5899 HBL1_DMSO_200M_050219_2,5901 HBL1_DMSO_200M_050219_2,5901,LPPQQQQRI True True LPPQQQQRI 30.659745 554.317065417767 16466198.0 5899.0 ENSG00000109606|ENST00000336812|DHX15;;ENST00000336812.4_1_4:24550520-24550565:-|nuORF 5.009565989176433 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5902 30.663 156.0 599050.0 25 0 63211.0 + 44547 YPESNSRAI 9 91 518.7561024368582 1035.4976519405163 2 518.7565185427666 MULTI CID FTMS 0 0 0 5899 458676.65625 0.7733391887491715 3 -0.1841850280761718 3 Unmodified _YPESNSRAI_ ENSG00000166037|ENST00000325542|CEP57;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 31.26834338654808 0.1333407332142048 4 YPESN 5 4 65.732 0.0 0.0 6.3479 0.0 0.0 0.0 442.24140344791255 442.24140344791255 47.80008452963799 0.0 0.0 0.0 0 0.5994850021680094 2.0 0.805462187404089 0.0 + YPESN 6.3479 + + 77 + 1 2.496 77414.2 1.0 1733 4167 5899 HBL1_DMSO_200M_050219_2,5902 HBL1_DMSO_200M_050219_2,5902,YPESNSRAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5903 30.668 277.0 346280.0 25 0 84042.0 -1 0 98 364.19813778995183 363.19086132335184 1 364.1973144412041 MULTI CID FTMS 0 0 0 5899 166909.359375 0.2582915807604841 -13 0.2991180419921875 4 4 {M(Oxidation (M))|F} 1 -1 19.732 0.0 0.0 5.4329 0.0 0.0 198.1120324432721 0.0 198.1120324432721 0.0 4.158781176037889 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F} 5.4329 - 8 + 1 2.496 85590.3 1.0 1734 4167 5899 HBL1_DMSO_200M_050219_2,5903 HBL1_DMSO_200M_050219_2,5903, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5904 30.682 800.0 107570.0 25 0 12084.0 + 80 AAGPISERNQD 11 102 600.2864404904593 1198.5583280477183 2 600.2863036990166 MULTI CID FTMS 0 0 0 5899 140179.65625 1.0 0 0.0 5 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAGPISERNQD_ ENSG00000143368|ENST00000271628|SF3B4 57.10758569107544 0.0808838796364293 4 [{I|L}P][MD][YQ]{I|L}PGA 10 11 69.712 0.0 0.0 5.8163 0.0 0.0 0.0 110.02265845226852 110.02265845226852 46.69135408287633 0.0 0.0 0.0 0 1.9957416651753048 2.0 0.3807196863200844 1.2302046884880935 [{I|L}P][MD][YQ]{I|L}PGA 5.8163 - 1414 1 2.496 64863.7 0.550000011920929 1735 4167 5899 HBL1_DMSO_200M_050219_2,5904 HBL1_DMSO_200M_050219_2,5904,AAGPISERNQD True False AAGPISERNQD 30.681779 600.286303699017 1086535.25 5899.0 ENSG00000143368|ENST00000271628|SF3B4 10.179143269856771 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5905 30.696 800.0 56729.0 25 0 9159.0 -1 0 48 1007.0730134289624 3018.197210887088 3 1007.406481921673 MULTI CID FTMS 0 0 0 5899 105417.34375 0.7586346328503702 1 -0.0544986724853515 6 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.496 48860.9 0.4399999976158142 1736 4167 5899 HBL1_DMSO_200M_050219_2,5905 HBL1_DMSO_200M_050219_2,5905, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5907 30.701 124.0 360990.0 25 0 27708.0 -1 TPMGPGRTV 9 92 466.2366368969576 930.4587208607152 2 466.2371398806572 MULTI CID FTMS 0 0 0 5906 189939.625 0.4642692016286057 2 -0.1296863555908203 1 Oxidation (M) _TPM(Oxidation (M))GPGRTV_ ENSG00000116977|ENST00000366584|LGALS8;ENST00000489586.6_1_1:236706790-236711458:+|nuORF;nc|ENSG00000116977|O00214-2|LGALS8 20.41453444215458 0.284085796332423 4 TP{M(Oxidation (M))|F}GP 5 -1 38.645 0.0 0.0 4.1533 0.0 0.0 0.0 428.22800623111567 428.22800623111567 14.180964183448438 0.0 0.0 0.0 0 0.7306883134323937 1.3010299956639813 0.0 0.0 TP{M(Oxidation (M))|F}GP 4.1533 + + 154 + 1 2.496 39243.9 1.0 1737 4168 5906 HBL1_DMSO_200M_050219_2,5907 HBL1_DMSO_200M_050219_2,5907,TPMGPGRTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5908 30.715 800.0 77565.0 25 0 6845.1 + + 11321 HQVDPTEPVGGA 12 86 603.7915223179472 1205.5684917026942 2 603.7916137576103 MULTI CID FTMS 0 0 0 5906 112405.3828125 0.5318925420903701 2 -0.1296863555908203 2 Unmodified _GEWTYVAVPGQ_ nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 11.494710602746466 0.7960433852372589 4 [VP]GG[WY]E[{I|L}T]NA 11 -1 + 34.455 0.0 0.0 2.858 2.858 62.78 0.0 0.0 0.0 1.4928876664371415 0.9948500216800936 0.9948500216800936 0.9948500216800936 0 0.5994850021680094 2.0 0.0 0.0 [VP]GG[WY]E[{I|L}T]NA;[VP]GG[WY]{M(Oxidation (M))|F}[PA]{[NV]|[RG]};[HQ]VD[TP]E[VP]NA;[VP]N[WY]E[{I|L}T]NA;[VP]N[WY]{M(Oxidation (M))|F}[PA]{[NV]|[RG]};[VP]GG[WY]E[VS]{[NV]|[RG]};[HQ]VD[TP]E[PA]{[NV]|[RG]};[VP]N[WY]E[VS]{[NV]|[RG]} 2.858;2.7755;2.7341;2.3125;2.23;2.111;1.9872;1.5656 -;-;-;-;-;-;-;- 229 1 2.496 50464.8 0.6600000262260437 1738 4168 5906 HBL1_DMSO_200M_050219_2,5908 HBL1_DMSO_200M_050219_2,5908,GEWTYVAVPGQ False False HQVDPTEPVGGA 30.714566 603.79161375761 2909211.5 5906.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 8.748438835144043 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5909 30.719 236.0 171020.0 25 0 24210.0 + 36384 SYQESTKQL 9 77 542.2696712092883 1082.5247894853765 2 542.2700073122978 MULTI CID FTMS 0 0 0 5906 243671.546875 0.0447582052591613 28 -0.893341064453125 3 Unmodified _SYQESTKQL_ ENSG00000124422|ENST00000261497|USP22;ENSG00000247746|ENST00000500968|USP51;ENSG00000273820|ENST00000621775|USP27X;ENST00000478443.1_1_17:20910195-20914666:-|nuORF;nc|ENSG00000124422|Q9UPT9-2|USP22 21.53697664764585 0.2571576504437394 4 Y 1 8 11.792 0.0 0.0 1.0893 0.0 0.0 378.1538310886952 538.2838228815061 916.4376539702014 0.0 0.0 0.0 0.0 0 0.6307196863200843 0.0 0.0 0.0 + Y 1.0893 + + 123 + 1 2.496 37838.2 1.0 1739 4168 5906 HBL1_DMSO_200M_050219_2,5909 HBL1_DMSO_200M_050219_2,5909,SYQESTKQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5910 30.725 357.0 191650.0 25 0 14971.0 + -1 ITFSGGHCSL 10 107 539.7545000081831 1077.494447083166 2 539.7547485232353 MULTI CID FTMS 0 0 0 5906 192465.15625 0.115401183525972 28 -0.893341064453125 4 Carbamidomethyl (C) _ITFSGGHC(Carbamidomethyl (C))SL_ REV__ENST00000480825.6_1_1:36932776-36933753:-|nuORF 14.838274106304384 0.5985701837916485 4 {I|L}PV 3 -1 42.703 0.0 0.0 3.9632 0.0 0.0 0.0 765.2668278663177 765.2668278663177 20.90743145471194 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.0 0.0 {I|L}PV 3.9632 - 104 + 1 2.496 59788.1 1.0 1740 4168 5906 HBL1_DMSO_200M_050219_2,5910 HBL1_DMSO_200M_050219_2,5910,ITFSGGHCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5911 30.739 800.0 61904.0 25 0 3411.6 + -1 CLCFAPCIAF 10 90 629.7764839261783 0 629.7769042849541 PEAK CID FTMS 0 0 0 5906 166699.390625 1.0 0 0.0 5 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 18.13498045792455 0.3131020363041972 4 ANQAGAEDH 9 -1 49.863 0.0 0.0 3.9651 0.0 0.0 165.0775843579732 196.07273279361564 361.15031715158887 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.5 ANQAGAEDH 3.9651 - 493 + 1 2.496 40916.7 0.6499999761581421 1741 4168 5906 HBL1_DMSO_200M_050219_2,5911 HBL1_DMSO_200M_050219_2,5911,CLCFAPCIAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5912 30.753 800.0 77328.0 25 0 5874.8 + 3819 DAIRQSNQI 9 111 522.7753891839657 1043.5362254347313 2 522.7759887576103 MULTI CID FTMS 0 0 0 5906 140118.234375 1.0 0 0.0 6 Unmodified _DAIRQSNQI_ ENSG00000269335|ENST00000594239|IKBKG;nc|ENSG00000269335|Q9Y6K9-2|IKBKG;nc|ENSG00000269335|Q9Y6K9-3|IKBKG 36.506200033944 0.094635877243972 4 {[DA]|[EG]}[R{I|L}]QSGGQ{I|L} 10 2 + 78.159 0.0 0.0 7.4898 7.4898 89.808 0.0 0.0 0.0 18.543060418010803 16.532125137753432 16.532125137753432 9.164539485499231 0 0.5138793319624578 2.0 0.3807196863200844 0.3807196863200844 {[DA]|[EG]}[R{I|L}]QSGGQ{I|L};{[DA]|[EG]}[R{I|L}][AG]SGGQ{I|L};{[DA]|[EG]}[R{I|L}]QSGG[AG]{I|L};{[DA]|[EG]}[R{I|L}]QSNQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}QSGGQ{I|L};{[DA]|[EG]}[R{I|L}][AG]SNQ{I|L};{[DA]|[EG]}[R{I|L}]QSN[AG]{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}QSGGQ{I|L};[Q{I|L}][DV]QSGGQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}QSGG[AG]{I|L} 7.4898;6.6116;6.6116;6.499;5.7129;5.6166;5.6166;5.4045;5.2848;4.8347 -;-;-;+;-;-;-;-;-;- + 321 1 2.496 56656.7 0.6299999952316284 1742 4168 5906 HBL1_DMSO_200M_050219_2,5912 HBL1_DMSO_200M_050219_2,5912,DAIRQSNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5913 30.76 398.0 123960.0 25 0 8254.1 + 28916 QAPPPPQQV 9 99 481.2585717845568 960.5025906359136 2 481.2594177126884 MULTI CID FTMS 0 0 0 5906 141971.359375 1.0 0 0.0 7 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 32.30548876998284 0.1201446275138228 4 A 1 8 11.99 0.0 0.0 1.2483 0.0 0.0 567.3020729130604 319.1420992486938 886.4441721617543 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + A 1.2483 + + 100 + 1 2.496 43279.5 1.0 1743 4168 5906 HBL1_DMSO_200M_050219_2,5913 HBL1_DMSO_200M_050219_2,5913,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5914 30.768 421.0 189840.0 25 0 29947.0 + 24923 MPPKAGQTI 9 107 471.7566710214138 941.4987891096276 2 471.7570068240166 MULTI CID FTMS 0 0 0 5906 119592.359375 0.4290337715276112 -46 1.126749038696289 8 Unmodified _MPPKAGQTI_ ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB;nc|ENSG00000170322|Q6P4R8-3|NFRKB 36.12702656103203 0.0967173616627612 4 MPPKTQQ{I|L} 8 3 + 48.835 0.0 0.0 5.187 5.187 87.271 0.0 0.0 0.0 13.73667275833668 1.5283541543426793 1.5283541543426793 41.93434108191034 0 0.4929928190999391 2.0 0.3494850021680094 0.4247425010840047 MPPKTQQ{I|L};[YV]{[QV]|[N{I|L}]|[RA]|[KV]}[YG]T{I|L};[{M(Oxidation (M))|F}V][KP][HT]T{I|L} 5.187;0.733;0.18991 -;-;- 269 + 1 2.496 64157.9 1.0 1744 4168 5906 HBL1_DMSO_200M_050219_2,5914 HBL1_DMSO_200M_050219_2,5914,MPPKAGQTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5915 30.778 508.0 412580.0 25 0 35681.0 + 44713 YPHDPPKV 8 135 476.7481369075522 951.4817208819044 2 476.7482787966728 MULTI CID FTMS 0 0 0 5906 111021.171875 0.060823911990339 -13 0.3412055969238281 9 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 88.95385435242217 0.0526491763134581 4 YPHDPPKV 8 0 + 83.912 0.0 0.0 8.8191 8.8191 94.778 0.0 0.0 0.0 14.636153375280188 11.28907713326285 11.28907713326285 11.28907713326285 0 2.281234684152075 1.3979400086720375 0.0 0.5796896906561032 + + YPHDPPKV;YPHDPPVK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HDPPKV;YPHDPVPK;YPWYPKV;YPHDPVKP;[DP]HYPPKV;[HD]PYPPKV;YPHDVPPK;YPHDVPKP 8.8191;7.6326;7.2809;6.7653;6.5656;6.5193;6.3826;6.3242;6.1085;5.8625 +;-;+;-;-;-;-;-;-;- + 1728 + 1 2.496 159919.1 1.0 1745 4168 5906 HBL1_DMSO_200M_050219_2,5915 HBL1_DMSO_200M_050219_2,5915,YPHDPPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5917 30.783 39.0 1168300.0 25 0 101340.0 + -1 TPMPMILP 8 76 458.2391035184713 914.4636541037428 2 458.2395812869072 MULTI CID FTMS 0 0 0 5916 1333424.125 0.2082261139462202 6 -0.1878662109375 1 Oxidation (M) _TPMPM(Oxidation (M))ILP_ REV__nc|ENSG00000176046|O60356-2|NUPR1 28.17323086031832 0.4514957916281387 4 TPMG 4 -1 64.24 0.0 0.0 7.0249 0.0 0.0 0.0 525.2797470356492 525.2797470356492 53.20947833959288 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.0 0.0 TPMG 7.0249 - 73 + 1 2.496 42685.4 1.0 1746 4169 5916 HBL1_DMSO_200M_050219_2,5917 HBL1_DMSO_200M_050219_2,5917,TPMPMILP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5918 30.785 133.0 602200.0 25 0 90299.0 + 26807 APPPPPPPP 9 85 433.74220658394137 0 433.7421752810478 PEAK CID FTMS 0 0 0 5916 381288.34375 0.6892046496978198 5 -0.1511306762695312 2 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000150275|Q96QU1-2|PCDH15;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000204463|P46379-2|BAG6;ENSG00000005483|ENST00000311117|KMT2E;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000106299|ENST00000223023|WASL;ENSG00000142235|ENST00000600059|LMTK3;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;nc|ENSG00000127481|Q5T4S7-5|UBR4;nc|ENSG00000150275|Q96QU1-6|PCDH15;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000173273|O95271-2|TNKS;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000107758|ENST00000360663|PPP3CB;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000137710|P35241-5|RDX;ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1;nc|ENSG00000168066|Q15637-7|SF1;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;ENSG00000158195|ENST00000618852|WASF2;ENSG00000184937|ENST00000452863|WT1;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000150275|Q96QU1-4|PCDH15;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000204463|P46379|BAG6;nc|ENSG00000005483|Q8IZD2-7|KMT2E;nc|ENSG00000204463|P46379-5|BAG6;ENSG00000168066|ENST00000377390|SF1;ENSG00000165821|ENST00000537235|SALL2;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;nc|ENSG00000182095|O15417-2|TNRC18;nc|ENSG00000171634|Q12830|BPTF;ENSG00000105323|ENST00000392006|HNRNPUL1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;nc|ENSG00000133816|O94851|MICAL2;ENSG00000010017|ENST00000011619|RANBP9;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;nc|ENSG00000185090|Q5VSG8-3|MANEAL;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000150275|Q96QU1|PCDH15;ENSG00000185090|ENST00000373045|MANEAL;ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000107758|P16298-4|PPP3CB;ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000107758|P16298-3|PPP3CB;ENSG00000183307|ENST00000331437|TMEM121B;nc|ENSG00000126464|Q9ULL5-2|PRR12;nc|ENSG00000137710|P35241-2|RDX;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;ENSG00000171634|ENST00000306378|BPTF;ENSG00000204463|ENST00000676615|BAG6;ENSG00000122574|ENST00000242140|WIPF3;nc|ENSG00000107758|P16298-2|PPP3CB;ENSG00000182601|ENST00000331351|HS3ST4;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;ENSG00000184863|ENST00000401878|RBM33;ENSG00000173273|ENST00000310430|TNKS;ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000168066|Q15637-2|SF1;ENSG00000171992|ENST00000307662|SYNPO 79.93452657146344 0.0144931966243808 4 PPPPE 5 5 41.071 0.0 0.0 4.7455 0.0 0.0 265.1433354317515 80.05121027164296 345.19454570339445 0.0 0.0 0.0 0.0 0 1.8494850021680087 0.0 0.9634679910804403 0.0 PPPPE 4.7455 - 73 + 1 2.496 67496.2 1.0 1747 4169 5916 HBL1_DMSO_200M_050219_2,5918 HBL1_DMSO_200M_050219_2,5918,PAPPPPPPP False False APPPPPPPP 30.785347 433.742175281048 81796448.0 5916.0 ENSG00000095539|ENST00000210633|SEMA4G;;nc|ENSG00000150275|Q96QU1-2|PCDH15;;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;;nc|ENSG00000184937|P19544-4|WT1;;nc|ENSG00000204463|P46379-2|BAG6;;ENSG00000005483|ENST00000311117|KMT2E;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000106299|ENST00000223023|WASL;;ENSG00000142235|ENST00000600059|LMTK3;;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000150275|Q96QU1-6|PCDH15;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000173273|O95271-2|TNKS;;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;;ENSG00000215474|ENST00000425639|SKOR2;;ENSG00000107758|ENST00000360663|PPP3CB;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;nc|ENSG00000137710|P35241-5|RDX;;ENSG00000105879|ENST00000440859|CBLL1;;nc|ENSG00000105879|Q75N03-2|CBLL1;;nc|ENSG00000168066|Q15637-7|SF1;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;nc|ENSG00000171634|Q12830-4|BPTF;;nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000126464|ENST00000418929|PRR12;;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;;ENSG00000158195|ENST00000618852|WASF2;;ENSG00000184937|ENST00000452863|WT1;;nc|ENSG00000165821|Q9Y467|SALL2;;nc|ENSG00000150275|Q96QU1-4|PCDH15;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000184937|P19544-2|WT1;;nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000005483|Q8IZD2-7|KMT2E;;nc|ENSG00000204463|P46379-5|BAG6;;ENSG00000168066|ENST00000377390|SF1;;ENSG00000165821|ENST00000537235|SALL2;;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;;nc|ENSG00000182095|O15417-2|TNRC18;;nc|ENSG00000171634|Q12830|BPTF;;ENSG00000105323|ENST00000392006|HNRNPUL1;;nc|ENSG00000184937|P19544|WT1;;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;;nc|ENSG00000133816|O94851|MICAL2;;ENSG00000010017|ENST00000011619|RANBP9;;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;;nc|ENSG00000185090|Q5VSG8-3|MANEAL;;nc|ENSG00000184937|P19544-8|WT1;;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;;nc|ENSG00000150275|Q96QU1|PCDH15;;ENSG00000185090|ENST00000373045|MANEAL;;ENSG00000137710|ENST00000645495|RDX;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000107758|P16298-4|PPP3CB;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000005483|Q8IZD2-2|KMT2E;;nc|ENSG00000107758|P16298-3|PPP3CB;;ENSG00000183307|ENST00000331437|TMEM121B;;nc|ENSG00000126464|Q9ULL5-2|PRR12;;nc|ENSG00000137710|P35241-2|RDX;;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;nc|ENSG00000095539|Q9NTN9|SEMA4G;;ENSG00000171634|ENST00000306378|BPTF;;ENSG00000204463|ENST00000676615|BAG6;;ENSG00000122574|ENST00000242140|WIPF3;;nc|ENSG00000107758|P16298-2|PPP3CB;;ENSG00000182601|ENST00000331351|HS3ST4;;nc|ENSG00000184937|P19544-3|WT1;;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;;nc|ENSG00000137710|P35241-4|RDX;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;;ENSG00000184863|ENST00000401878|RBM33;;ENSG00000173273|ENST00000310430|TNKS;;ENSG00000150275|ENST00000644397|PCDH15;;nc|ENSG00000168066|Q15637-2|SF1;;ENSG00000171992|ENST00000307662|SYNPO 1.4374605019887288 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5919 30.787 88.0 528330.0 25 0 34417.0 + 27073 PEVHFAEQL 9 89 535.2675157962208 1068.5204786592417 2 535.2677490115166 MULTI CID FTMS 0 0 0 5916 518753.0625 0.2689416076132707 -6 0.2489490509033203 3 Unmodified _PEVHFAEQL_ REV__ENSG00000092929|ENST00000207549|UNC13D;REV__ENST00000585574.5_1_17:73837076-73839803:-|nuORF;REV__ENST00000587504.5_1_17:73835995-73839803:-|nuORF;REV__ENST00000591563.5_1_17:73836050-73840487:-|nuORF;REV__nc|ENSG00000092929|Q70J99-2|UNC13D;REV__nc|ENSG00000092929|Q70J99-3|UNC13D 11.640296217721598 0.521594087909532 4 [EP]QDTR[NP]{I|L} 9 -1 + 34.575 0.0 0.0 3.2358 3.2358 76.091 0.0 0.0 0.0 19.090475125574866 7.4472749489669425 7.4472749489669425 9.208187539523756 0 0.0 0.0 0.4247425010840047 0.3494850021680094 [EP]QDTR[NP]{I|L};[EP][AG]DTR[NP]{I|L};[EP]QDTR[QP]V;[EP][AG]DTR[QP]V 3.2358;2.374;2.2431;1.3813 -;-;-;- 115 + 1 2.496 42185.6 1.0 1748 4169 5916 HBL1_DMSO_200M_050219_2,5919 HBL1_DMSO_200M_050219_2,5919,PEVHFAEQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5920 30.789 99.0 785920.0 25 0 140430.0 + 1177 AHSDAYQTREI 11 74 430.873634519519 1289.599074158757 3 430.8737365603447 MULTI CID FTMS 0 0 0 5916 321199.25 1.0 0 0.0 4 Unmodified _AHSDAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 15.538449434065043 0.7119291465483839 4 Q 1 10 12.232 0.0 0.0 0.94851 0.0 0.0 644.2557261129641 514.2636506752063 1158.5193767881706 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.5 + Q 0.94851 + + 20 + 1 2.496 68320.9 1.0 1749 4169 5916 HBL1_DMSO_200M_050219_2,5920 HBL1_DMSO_200M_050219_2,5920,AHSDAYQTREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5921 30.796 371.0 346400.0 25 0 45577.0 + 6525 EALAKAGG 8 115 358.70069473809343 715.3868365429869 2 358.7003051638603 MULTI CID FTMS 0 0 0 5916 192746.390625 0.1347585194847688 -7 0.2888031005859375 5 Unmodified _EALAKAGG_ REV__ENSG00000167984|ENST00000359128|NLRC3;REV__nc|ENSG00000167984|Q7RTR2-2|NLRC3;REV__nc|ENSG00000167984|Q7RTR2-4|NLRC3 18.13498045792455 0.6430038125133779 4 EA{I|L}EVR 6 -1 + 71.199 0.0 0.0 9.9525 9.9525 80.626 0.0 0.0 0.0 31.426675035687303 0.2996322337744175 0.2996322337744175 0.2996322337744175 0 0.2887254899964357 1.5228787452803376 0.75 0.2887254899964357 EA{I|L}EVR;EA{I|L}ERV;EA{I|L}VER;EAV{I|L}ER;EA{I|L}VWV;EAV{I|L}WV;EA{I|L}[RD]{I|L};EAV{[RE]|[WV]}{I|L};E[KT][KG][PG] 9.9525;9.9106;9.6166;8.495;8.0378;7.3709;7.0214;5.8998;0.41219 -;-;-;-;-;-;-;-;- 142 + 1 2.496 104614.7 1.0 1750 4169 5916 HBL1_DMSO_200M_050219_2,5921 HBL1_DMSO_200M_050219_2,5921,EALAKAGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5922 30.805 517.0 141860.0 25 0 17855.0 + 1178 AHSDAYQTREI 11 68 645.8075635719366 1289.6005742106731 2 645.8078491091728 MULTI CID FTMS 0 0 0 5916 159047.859375 1.0 0 0.0 6 Unmodified _AHSDAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 61.16457814134879 0.0644188075391754 4 AHSDAYQ 7 4 94.214 0.0 0.0 7.3057 0.0 0.0 0.0 514.2619722955686 514.2619722955686 81.02645733133485 0.0 0.0 0.0 0 1.8252574989159955 1.6989700043360187 0.8494850021680094 0.0 + AHSDAYQ 7.3057 + + 148 + 1 2.496 60904.1 1.0 1751 4169 5916 HBL1_DMSO_200M_050219_2,5922 HBL1_DMSO_200M_050219_2,5922,AHSDAYQTREI True True AHSDAYQTREI 30.805211 645.807849109173 2870295.0 5916.0 ENSG00000127914|ENST00000356239|AKAP9;;nc|ENSG00000127914|Q99996-3|AKAP9;;nc|ENSG00000127914|Q99996-6|AKAP9 3.0249780416488647 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5923 30.811 347.0 178170.0 25 0 17470.0 11065 GEAPGRPY 8 95 423.70992276680994 845.4052926004199 2 423.7104675173759 MULTI CID FTMS 0 0 0 5916 125209.609375 0.9051257532158368 -2 0.1367397308349609 7 Unmodified _GEAPGRPY_ ENST00000582186.5_3_17:73467910-73468033:+|nuORF 18.13498045792455 0.6430038125133779 4 {[DA]|[EG]}AS 4 5 45.445 0.0 0.0 5.3756 0.0 0.0 0.0 498.2507726136451 498.2507726136451 31.95046257204389 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[DA]|[EG]}AS 5.3756 - 72 + 1 2.496 53084.6 1.0 1752 4169 5916 HBL1_DMSO_200M_050219_2,5923 HBL1_DMSO_200M_050219_2,5923,GEAPGRPY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5924 30.825 800.0 115970.0 25 0 6790.6 + -1 YPRSGTGQTI 10 142 540.2779988588684 1078.541444784537 2 540.2780029177666 MULTI CID FTMS 0 0 0 5916 116953.046875 0.6676203639599289 8 -0.2541217803955078 8 Oxidation (M) _YM(Oxidation (M))FILYTI_ nc|ENSG00000164031|Q8TBM8-2|DNAJB14;ENSG00000164031|ENST00000442697|DNAJB14 34.18733598223924 0.3315367612694167 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QS]|[NT]}WGQT{I|L} 9 -1 + 43.716 0.0 0.0 4.0532 4.0532 66.126 0.0 0.0 0.0 1.1001717144734968 14.09256854528806 1.1001717144734968 1.1001717144734968 0 1.274227503252014 0.8860566476931632 0.5 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QS]|[NT]}WGQT{I|L};[{I|L}T]WWPYT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YYPYT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QS]|[NT]}WG[AG]T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]WGQT{I|L};[{I|L}P][HQ]{[DA]|[EG]}GQT{I|L};[{I|L}P]{[MG]|[TS]}{[MG]|[TS]}PYT{I|L};[{I|L}T]WWPTY{I|L};[VP]{[DS]|[MA]|[CV]|TT}{[MG]|[TS]}PYT{I|L};[PS][YK]WGQT{I|L} 4.0532;3.9512;3.433;3.1995;3.0436;2.9537;2.9341;2.7041;2.5742;2.4581 -;-;-;-;-;-;-;-;-;- 1276 1 2.496 76452.8 0.5600000023841858 1753 4169 5916 HBL1_DMSO_200M_050219_2,5924 HBL1_DMSO_200M_050219_2,5924,YMFILYTI False False YPRSGTGQTI 30.825309 540.278002917767 2733673.5 5916.0 nc|ENSG00000164031|Q8TBM8-2|DNAJB14;;ENSG00000164031|ENST00000442697|DNAJB14 2.224479017158349 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5926 30.831 170.0 445460.0 25 0 61424.0 + 33265 SFPASSGVSH 10 79 488.23034326897925 974.4461336047584 2 488.2308837771416 MULTI CID FTMS 0 0 0 5925 297439.0 0.4036753526691636 61 -1.86421012878418 1 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 58.6788170122104 0.0400518768368984 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH 10 0 + 72.329 0.0 0.0 7.4226 7.4226 94.662 0.0 0.0 0.0 30.44506439708221 14.146518864155126 14.146518864155126 23.907854813243983 0 0.3807196863200844 2.0 1.4876954943324543 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PH;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}CAPDT;{[QN]|[E{I|L}]|[KN]}[VG][MN]PDT;[PA]S[SG]VSH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[PA]S[SG][EP]P{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}[KQ]SH{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 7.4226;4.9691;4.8611;3.8209;2.4648;2.0959;1.5285;0.3397 +;-;-;-;-;-;-;- + 221 + 1 2.496 63449.1 1.0 1754 4170 5925 HBL1_DMSO_200M_050219_2,5926 HBL1_DMSO_200M_050219_2,5926,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5927 30.84 508.0 162910.0 25 0 38551.0 -1 LMGICLRSSL 10 78 575.3108773787286 1148.6072018242571 2 575.3103515505791 MULTI CID FTMS 0 0 0 5925 125452.3359375 1.0 0 0.0 2 Carbamidomethyl (C) _LMGIC(Carbamidomethyl (C))LRSSL_ ENST00000344651.4_1_12:121158842-121158938:+|nuORF 9.38312468134398 0.6832340498775793 4 DD 2 -1 13.188 0.0 0.0 1.1481 0.0 0.0 0.0 915.5625704401 915.5625704401 0.6246936830414995 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DD 1.1481 - 19 + 1 2.496 67591.5 1.0 1755 4170 5925 HBL1_DMSO_200M_050219_2,5927 HBL1_DMSO_200M_050219_2,5927,LMGICLRSSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5928 30.841 30.0 2609700.0 25 0 397320.0 + 44716 YPHDPPKV 8 88 318.16810558323687 951.4824873499106 3 318.1677429080009 MULTI CID FTMS 0 0 0 5925 1622955.5 0.2776444498541642 -13 0.4444007873535156 3 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 22.736283301280096 0.5659792798204337 4 YPHDPPKV 8 0 + 45.61 0.0 0.0 4.7936 4.7936 51.635 0.0 0.0 0.0 16.40978057358332 0.0 0.0 0.0 0 0.6505149978319906 0.0 0.0 0.0 + + YPHDPPKV;YPHDPPVK;YPHDPVPK;YPHDVPPK;YWYPPVK;YWYPPKV;YPWYPVK;YPWYPKV;YWYPVPK;YWYVPPK 4.7936;4.7936;4.2922;4.1071;2.7747;2.7747;2.4328;2.4328;2.2732;2.0881 +;-;-;-;-;-;-;-;-;- + 144 + 1 2.496 67573.5 1.0 1756 4170 5925 HBL1_DMSO_200M_050219_2,5928 HBL1_DMSO_200M_050219_2,5928,YPHDPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5929 30.846 237.0 237630.0 25 0 20514.0 + 28836 QAETSQRLV 9 89 516.2790654486155 1030.5435779640309 2 516.2793456912041 MULTI CID FTMS 0 0 0 5925 153694.890625 0.853152209398378 -1 0.0474452972412109 4 Unmodified _QAETSQRLV_ chr12:49323946-49324231|15|10.27|0.16|6.04|+|0|TROAP,TROAP|1;chr12:49324037-49324155|48|11.94|0.5|4.57|+|ENST00000380327|TROAP,TROAP;chr12:49324037-49324231|48|20.44|0.88|4.54|+|ENST00000548311|TROAP,TROAP;ENSG00000135451|ENST00000257909|TROAP;nc|ENSG00000135451|Q12815-2|TROAP;nc|ENSG00000135451|Q12815-3|TROAP 20.41453444215458 0.284085796332423 4 QAETSQ 6 3 55.394 0.0 0.0 5.3752 0.0 0.0 0.0 383.2404879205688 383.2404879205688 48.31546893236258 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.4247425010840047 + QAETSQ 5.3752 + + 53 + 1 2.496 47885.0 1.0 1757 4170 5925 HBL1_DMSO_200M_050219_2,5929 HBL1_DMSO_200M_050219_2,5929,QAETSQRLV False True QAETSQRLV 30.845755 516.279345691204 1218089.75 5925.0 nc|ENSG00000135451|Q12815-3|TROAP;;chr12:49324037-49324231|48|20.44|0.88|4.54|+|ENST00000548311|TROAP,TROAP;;chr12:49324037-49324155|48|11.94|0.5|4.57|+|ENST00000380327|TROAP,TROAP;;nc|ENSG00000135451|Q12815-2|TROAP;;ENSG00000135451|ENST00000257909|TROAP;;chr12:49323946-49324231|15|10.27|0.16|6.04|+|0|TROAP,TROAP|1 2.2862199942270918 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5931 30.863 800.0 193340.0 25 0 18460.0 + -1 KTQINVLMK 9 107 545.817973790653 1089.621394648106 2 545.8184081912041 MULTI CID FTMS 0 0 0 5930 166957.609375 0.3525121980460297 5 -0.1445350646972656 1 Oxidation (M) _KTQINVLM(Oxidation (M))K_ REV__ENSG00000280204|ENST00000641544|OR1S1;REV__nc|ENSG00000280204|Q8NH92|OR1S1 10.823927491677226 0.5436922275383211 4 KTT[{I|L}P]PWK 8 -1 36.246 0.0 0.0 3.3265 0.0 0.0 120.05969715190436 0.0 120.05969715190436 0.0 24.792293452872308 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.6643943297944485 KTT[{I|L}P]PWK 3.3265 - 157 + 1 2.497 122860.1 0.7699999809265137 1758 4171 5930 HBL1_DMSO_200M_050219_2,5931 HBL1_DMSO_200M_050219_2,5931,KTQINVLMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5932 30.877 800.0 193380.0 25 0 9108.8 + 39681 VEELKPTPE 9 154 521.2745092609676 1040.5344655887352 2 521.2756225466728 MULTI CID FTMS 0 0 0 5930 168711.4375 0.9089765110558492 -4 0.2045745849609375 2 Unmodified _VEELKPTPE_ CON__P02754 38.61474834105838 0.0830609365873449 4 VEE{I|L}K[TP]PE 9 0 + 60.752 0.0 0.0 5.8386 5.8386 74.307 0.0 0.0 0.0 14.673301219875237 1.6419203575597263 1.6419203575597263 1.6419203575597263 0 1.0044321917401078 1.3979400086720375 1.2847658448249766 0.0 + + VEE{I|L}K[TP]PE;VEE{I|L}K[TP]EP;VEEANN[R{I|L}]P;VEEANRRAP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HA]K{I|L}[HC]V;VEEANGG[R{I|L}]P;VEEAGGN[R{I|L}]P;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHK[HT]SV;{NN|[MP]|[D{I|L}]|[EV]}[DV]K{I|L}[HC]V;VAYHK[HT]SV 5.8386;5.6808;4.7382;4.0395;4.0278;3.8532;3.8532;3.7608;3.6908;3.6504 +;-;-;-;-;-;-;-;-;- + 968 + 1 2.497 122465.7 0.6600000262260437 1759 4171 5930 HBL1_DMSO_200M_050219_2,5932 HBL1_DMSO_200M_050219_2,5932,VEELKPTPE True True VEELKPTPE 30.877248 521.275622546673 1166341.25 5930.0 P02754 3.488073269526164 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 5933 30.891 800.0 86323.0 25 0 5935.9 + 24734 MPDSDSASSDV 11 118 555.7161449256914 1109.4177369181828 2 555.7170898318291 MULTI CID FTMS 0 0 0 5930 126277.890625 0.9520370034421258 -7 0.3097267150878906 3 Unmodified _MPDSDSASSDV_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 9.38312468134398 0.8308777417566128 4 MP 2 -1 39.949 0.0 0.0 3.6009 0.0 0.0 0.0 878.3036593072874 878.3036593072874 20.75257498915996 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 MP 3.6009 + + 441 + 1 2.497 63851.5 0.5899999737739563 1760 4171 5930 HBL1_DMSO_200M_050219_2,5933 HBL1_DMSO_200M_050219_2,5933,MPDSDSASSDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5935 30.896 19.0 3290400.0 25 0 430480.0 15347 IPLTLHTV 8 84 447.2761269222121 892.5377009112242 2 447.2763854861259 MULTI CID FTMS 0 0 0 5934 3117152.75 0.8468972091186825 -11 0.4351215362548828 1 Unmodified _IPLTLHTV_ ENSG00000039600|ENST00000265007|SOX30;nc|ENSG00000039600|O94993-2|SOX30 32.116972079565 0.368454113111938 4 {I|L}PPP 4 6 52.691 0.0 0.0 5.9035 0.0 0.0 0.0 485.27070032291255 485.27070032291255 41.086812544029456 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPP 5.9035 - 131 + 1 2.497 51760.9 1.0 1761 4172 5934 HBL1_DMSO_200M_050219_2,5935 HBL1_DMSO_200M_050219_2,5935,IPLTLHTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5936 30.897 71.0 536760.0 25 0 78085.0 + 4905 DGKQQVQVV 9 80 500.7758002866902 999.5370476401804 2 500.7751342654228 MULTI CID FTMS 0 0 0 5934 693279.25 0.4391587321596323 3 -0.07470703125 2 Unmodified _DGKQQVQVV_ ENSG00000068796|ENST00000407818|KIF2A;ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000068796|O00139-1|KIF2A;nc|ENSG00000068796|O00139-2|KIF2A;nc|ENSG00000068796|O00139-5|KIF2A;nc|ENSG00000068796|O00139|KIF2A;nc|ENSG00000142945|Q99661-2|KIF2C 19.256988751693697 0.3154191944385105 4 {[QV]|[N{I|L}]|[RA]|[KV]}VDDVQVV 9 5 {[QV]|[N{I|L}]|[RA]|[KV]}VDDVQ + + 16.198 21.329 2.7227 1.6205 1.6205 44.385 0.0 0.0 0.0 0.0 -8.978174818886373 -8.978174818886373 0.0 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}VDDVQVV 1.6205 - 62 + 1 2.497 33925.7 1.0 1762 4172 5934 HBL1_DMSO_200M_050219_2,5936 HBL1_DMSO_200M_050219_2,5936,DGKQQVQVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5937 30.906 467.0 212620.0 25 0 28788.0 + 3375 AYQEQAKGL 9 120 504.262843735316 1006.511134537432 2 504.2624999880791 MULTI CID FTMS 0 0 0 5934 178571.265625 0.9547816775128372 -2 0.065713882446289 3 Unmodified _AYQEQAKGL_ ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR 61.357469665136826 0.0253304979873734 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEQAKG{I|L} 9 0 + 58.425 0.0 0.0 5.8047 5.8047 84.892 0.0 0.0 0.0 47.82876828128684 5.874929182870119 5.874929182870119 9.208187539523747 0 0.7302046884880937 2.0 0.8807196863200843 0.6421590589602533 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEQAKG{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QE[AG]AKG{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]EQAKG{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEQ[KQ]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GEAQAKG{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]E[AG]AKG{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]EQ[KQ]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QE[AG][KQ]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GEA[AG]AKG{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QE{[TV]|[{I|L}S]}[PS]{I|L} 5.8047;4.8898;4.8898;4.7359;4.4058;3.9793;3.8157;3.8157;3.4952;3.3987 +;-;-;-;-;-;-;-;-;- + 229 + 1 2.497 77978.5 1.0 1763 4172 5934 HBL1_DMSO_200M_050219_2,5937 HBL1_DMSO_200M_050219_2,5937,AYQEQAKGL True True AYQEQAKGL 30.905738 504.262499988079 2333775.5 5934.0 ENSG00000116984|ENST00000366577|MTR;;nc|ENSG00000116984|Q99707-2|MTR 6.4244669278462725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5938 30.913 426.0 200710.0 25 0 12299.0 -1 NAKAMSARAE 10 110 532.7600969527524 1063.5056409723047 2 532.7599975466728 MULTI CID FTMS 0 0 0 5934 157949.265625 0.8025714194071258 3 -0.07470703125 4 Oxidation (M) _NAKAM(Oxidation (M))SARAE_ ENSG00000162244|ENST00000294189|RPL29;ENST00000480306.5_1_3:52027767-52028806:-|nuORF 8.745405648335112 0.6861838735306406 4 [YC(Carbamidomethyl (C))]AT 4 -1 10.991 0.0 0.0 1.0335 0.0 0.0 0.0 565.3111055963499 565.3111055963499 0.2775866392491579 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [YC(Carbamidomethyl (C))]AT 1.0335 - 109 + 1 2.497 69289.6 1.0 1764 4172 5934 HBL1_DMSO_200M_050219_2,5938 HBL1_DMSO_200M_050219_2,5938,NAKAMSARAE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5939 30.92 391.0 257600.0 25 0 27486.0 + -1 ASISHVAHV 9 145 460.70159897724 919.38864502128 2 460.7017089724541 MULTI CID FTMS 0 0 0 5934 144191.90625 0.3149573120969127 -8 0.355051040649414 5 Carbamidomethyl (C) _QSLGMC(Carbamidomethyl (C))PQ_ ENST00000466900.5_1_3:37035370-37047454:+|nuORF;ENST00000539477.5_1_3:37035370-37053334:+|nuORF;ENSG00000076242|ENST00000231790|MLH1;nc|ENSG00000076242|P40692-3|MLH1 14.838274106304384 0.6917062315640577 4 {[QS]|[NT]}{I|L}GP 5 -1 32.405 0.0 0.0 3.5247 0.0 0.0 0.0 434.11875330142817 434.11875330142817 15.06107156953824 0.0 0.0 0.0 0 0.7887254899964358 0.7695510786217261 0.0 0.0 {[QS]|[NT]}{I|L}GP 3.5247 - 367 + 1 2.497 84394.0 1.0 1765 4172 5934 HBL1_DMSO_200M_050219_2,5939 HBL1_DMSO_200M_050219_2,5939,QSLGMCPQ False False ASISHVAHV 30.920338 460.701708972454 647663.1875 5934.0 ENST00000466900.5_1_3:37035370-37047454:+|nuORF;;ENST00000539477.5_1_3:37035370-37053334:+|nuORF;;ENSG00000076242|ENST00000231790|MLH1;;nc|ENSG00000076242|P40692-3|MLH1 3.05815198024114 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5941 30.925 61.0 910100.0 25 0 129130.0 + 41215 VPEYIELM 8 60 497.2539101224504 992.4932673117008 2 497.2538024783134 MULTI CID FTMS 0 0 0 5940 1015320.8125 0.737071187562823 4 -0.1117591857910156 1 Unmodified _VPEYIELM_ REV__ENSG00000108622|ENST00000579788|ICAM2 32.116972079565 0.368454113111938 4 VPESS 5 -1 66.287 0.0 0.0 6.6788 0.0 0.0 0.0 490.24140344791255 490.24140344791255 38.83925646871916 0.0 0.0 0.0 0 0.7742275032520141 1.5228787452803376 0.7742275032520141 0.0 VPESS 6.6788 - 77 + 1 2.497 49526.9 1.0 1766 4173 5940 HBL1_DMSO_200M_050219_2,5941 HBL1_DMSO_200M_050219_2,5941,VPEYIELM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5942 30.929 216.0 317870.0 25 0 26376.0 + 3688 DAFGHKSNI 9 111 494.7462451567021 987.4779373802044 2 494.7460204958916 MULTI CID FTMS 0 0 0 5940 250413.609375 0.1214467230566246 -7 0.3150463104248047 2 Unmodified _DAFGHKSNI_ ENSG00000134058|ENST00000256443|CDK7;ENST00000512687.5_1_5:68530748-68551520:+|nuORF 75.5705956163825 0.0189455680524554 4 {[DA]|[EG]}{M(Oxidation (M))|F}GH[KS]N{I|L} 9 0 + 66.17 0.0 0.0 6.7009 6.7009 83.372 0.0 0.0 0.0 19.36613021135605 4.929155219028935 4.929155219028935 4.929155219028935 0 1.350576203518622 1.6989700043360187 0.0 1.236346736360778 + + {[DA]|[EG]}{M(Oxidation (M))|F}GH[KS]N{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}GH[KS]{I|L}N;{[DA]|[EG]}{M(Oxidation (M))|F}GH[KS]GG{I|L};W{M(Oxidation (M))|F}G[PG][TP]N{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{I|L}SHW;W{M(Oxidation (M))|F}G[PG][TP]{I|L}N;W{M(Oxidation (M))|F}[NP][TP]N{I|L};{[DA]|[EG]}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SHW;W{M(Oxidation (M))|F}[NP][TP]{I|L}N;W{M(Oxidation (M))|F}[KG]KHW 6.7009;6.2017;5.476;4.0942;3.6148;3.5951;3.1289;3.0672;2.6297;2.615 +;-;-;-;-;-;-;-;-;- + 742 + 1 2.497 53782.0 1.0 1767 4173 5940 HBL1_DMSO_200M_050219_2,5942 HBL1_DMSO_200M_050219_2,5942,DAFGHKSNI True True DAFGHKSNI 30.929087 494.746020495892 28563603.75 5940.0 ENSG00000134058|ENST00000256443|CDK7;;ENST00000512687.5_1_5:68530748-68551520:+|nuORF 8.166995525360107 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5944 30.937 324.0 378520.0 25 0 50362.0 + 44548 YPESNSRAI 9 99 518.7561024368582 1035.4976519405163 2 518.7567016482353 MULTI CID FTMS 0 0 0 5943 200561.515625 0.3381512393846439 10 -0.343362808227539 1 Unmodified _YPESNSRAI_ ENSG00000166037|ENST00000325542|CEP57;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-3|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 36.506200033944 0.094635877243972 4 YPESN 5 4 60.665 0.0 0.0 5.8586 0.0 0.0 0.0 442.24180017642817 442.24180017642817 40.45396392399776 0.0 0.0 0.0 0 0.6139829889124311 1.5228787452803376 0.8494850021680094 0.0 + YPESN 5.8586 + + 88 + 1 2.497 103714.5 1.0 1768 4174 5943 HBL1_DMSO_200M_050219_2,5944 HBL1_DMSO_200M_050219_2,5944,YPESNSRAI True True YPESNSRAI 30.937433 518.756701648235 44299184.0 5943.0 nc|ENSG00000166037|Q86XR8-3|CEP57;;nc|ENSG00000166037|Q86XR8-4|CEP57;;nc|ENSG00000166037|Q86XR8-5|CEP57;;nc|ENSG00000166037|Q86XR8-2|CEP57;;ENSG00000166037|ENST00000325542|CEP57 5.266247590382894 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5945 30.941 188.0 315590.0 25 0 46132.0 + 16327 IYHNGQDL 8 100 480.2323777451288 958.4502025570577 2 480.2323486208916 MULTI CID FTMS 0 0 0 5943 248020.625 0.9381038851835528 1 -0.0367355346679687 2 Unmodified _IYHNGQDL_ ENSG00000146094|ENST00000510898|DOK3;nc|ENSG00000146094|Q7L591|DOK3 30.22481116460888 0.4082965392918993 4 D{I|L} 2 6 30.573 0.0 0.0 3.1899 0.0 0.0 712.3281302687749 0.0 712.3281302687749 0.0 19.9772618612464 0.0 0.0 0 1.0 0.0 0.2614393726401688 0.0 + D{I|L} 3.1899 + + 97 + 1 2.497 49103.7 1.0 1769 4174 5943 HBL1_DMSO_200M_050219_2,5945 HBL1_DMSO_200M_050219_2,5945,IYHNGQDL False True IYHNGQDL 30.941046 480.232348620892 1443446.125 5943.0 ENSG00000146094|ENST00000510898|DOK3;;nc|ENSG00000146094|Q7L591|DOK3 1.9038841327031453 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5946 30.946 260.0 345110.0 25 0 34573.0 + 33229 SFMKNTKSV 9 115 347.8513998468188 0 347.8513976931572 PEAK CID FTMS 0 0 0 5943 237374.328125 0.9651263269571626 -2 0.0379714965820312 3 Unmodified _SFMKNTKSV_ ENSG00000171206|ENST00000643721|TRIM8 43.77239144664712 0.0487019148086553 4 NTKS 4 5 11.397 0.0 0.0 1.6429 0.0 0.0 146.39242264110015 114.05652033023672 260.44894297133686 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5629529932484498 0.3807196863200844 + NTKS 1.6429 + + 96 + 1 2.497 77022.2 1.0 1770 4174 5943 HBL1_DMSO_200M_050219_2,5946 HBL1_DMSO_200M_050219_2,5946,SFMKNTKSV True True SFMKNTKSV 30.945867 347.851397693157 1459446.0 5943.0 ENSG00000171206|ENST00000643721|TRIM8 7.196707725524902 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5947 30.96 800.0 168490.0 25 0 13354.0 2045 APLASFQDDL 10 129 538.766983527658 1075.519414122116 2 539.2670165896416 MULTI CID FTMS 0 0 0 5943 150258.03125 0.5635281304230677 -5 0.1511306762695312 4 Unmodified _APLASFQDDL_ ENSG00000162399|ENST00000651561|BSND 14.838274106304384 0.5985701837916485 4 P{I|L}{I|L}SDSSC(Carbamidomethyl (C))K 9 7 48.458 0.0 0.0 4.5056 0.0 0.0 70.03903156947406 0.0 70.03903156947406 0.0 19.16131990654592 0.0 0.0 0 0.1307196863200844 0.0 0.6747425010840047 0.0796896906561032 P{I|L}{I|L}SDSSC(Carbamidomethyl (C))K 4.5056 - 479 + 1 2.497 107635.8 0.6299999952316284 1771 4174 5943 HBL1_DMSO_200M_050219_2,5947 HBL1_DMSO_200M_050219_2,5947,APLASFQDDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5948 30.966 339.0 398170.0 25 0 32695.0 12533 GVGPIRKV 8 135 413.2681239542042 824.5216949752084 2 413.2683288455009 MULTI CID FTMS 0 0 0 5943 127994.34375 0.3487267463012344 -4 0.1036853790283203 5 Unmodified _GVGPIRKV_ ENSG00000047932|ENST00000368498|GOPC;nc|ENSG00000047932|Q9HD26-2|GOPC;nc|ENSG00000047932|Q9HD26-3|GOPC 38.15118350030904 0.2652218139009398 4 VGGP{I|L}KRV 8 4 + 62.392 0.0 0.0 7.5671 7.5671 85.739 0.0 0.0 0.0 44.957195644494725 5.577053078093222 5.577053078093222 4.771212547196626 0 0.8569758080123702 2.0 0.0 0.0 VGGP{I|L}KRV;GVGP{I|L}KRV;VGV[PA]KRV;GVV[PA]KRV;VNP{I|L}KRV 7.5671;6.9884;4.9428;4.3641;3.9402 -;-;-;-;- 197 + 1 2.497 108853.6 1.0 1772 4174 5943 HBL1_DMSO_200M_050219_2,5948 HBL1_DMSO_200M_050219_2,5948,GVGPIRKV False True DSPHAVTV 30.965831 413.268328845501 2907313.75 5943.0 nc|ENSG00000068912|Q96DZ1-2|ERLEC1;;nc|ENSG00000068912|Q96DZ1-3|ERLEC1;;ENSG00000068912|ENST00000185150|ERLEC1 3.383891026178996 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5950 30.971 68.0 820050.0 25 0 81634.0 + 24941 MPPPPPQGV 9 87 468.236188042907 934.457823152614 2 468.2363159060478 MULTI CID FTMS 0 0 0 5949 827133.5 0.4765260577570724 -22 0.6738853454589844 1 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 42.96799951952854 0.0591636306142405 4 [VG]EP[WK][YG] 8 7 + 21.36 0.0 0.0 2.2859 2.2859 77.472 0.0 0.0 0.0 4.097652991372847 2.956349637772753 2.956349637772753 20.54158659018768 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [VG]EP[WK][YG];{[RE]|[WV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V 2.2859;0.087631 -;- 148 1 2.497 48441.3 1.0 1773 4175 5949 HBL1_DMSO_200M_050219_2,5950 HBL1_DMSO_200M_050219_2,5950,MPPPPPQGV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5951 30.978 397.0 227210.0 25 0 20171.0 + 41100 VNLARASV 8 104 415.2473848994458 828.4802168656917 2 415.2476989626884 MULTI CID FTMS 0 0 0 5949 106798.3515625 0.7311207653610788 -1 0.0367355346679687 2 Unmodified _VNLARASV_ REV__nc|ENSG00000163110|Q96HC4-2|PDLIM5;REV__nc|ENSG00000163110|Q96HC4-3|PDLIM5 11.640296217721598 0.738950129755968 4 V 1 -1 12.474 0.0 0.0 1.5057 0.0 0.0 711.4008539279948 0.0 711.4008539279948 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.5057 + + 114 + 1 2.497 75534.1 1.0 1774 4175 5949 HBL1_DMSO_200M_050219_2,5951 HBL1_DMSO_200M_050219_2,5951,VNLARASV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5952 30.986 497.0 183210.0 25 0 17893.0 + 4315 DARPSVNAV 9 118 464.74607015314143 927.4775873730828 2 464.7458373904228 MULTI CID FTMS 0 0 0 5949 187398.15625 0.0970808595289213 -7 0.2701072692871094 3 Unmodified _DARPSVNAV_ ENSG00000087053|ENST00000346299|MTMR2;ENSG00000171100|ENST00000370396|MTM1;nc|ENSG00000087053|Q13614-2|MTMR2;nc|ENSG00000171100|Q13496-2|MTM1 43.77239144664712 0.0547478964384323 4 {[DA]|[EG]}R[PS]VNAV 9 0 + 60.852 0.0 0.0 6.5611 6.5611 87.822 0.0 0.0 0.0 10.748031033778744 32.035509672023174 10.748031033778744 9.208187539523747 0 1.1643943297944483 1.3979400086720375 0.2887254899964357 0.0 + + {[DA]|[EG]}R[PS]VNAV;{[DA]|[EG]}R[PS]VGGAV;[PS]{[NV]|[RG]}EVNAV;{[NV]|[RG]}[PS]EVNAV;[PS]{[NV]|[RG]}EVGGAV;{[NV]|[RG]}[PS]EVGGAV;[TP][HK][{M(Oxidation (M))|F}E]AV;{[VA]|[{I|L}G]}[RH]{[{M(Oxidation (M))|F}C]|[YS]}PV;{[NV]|[RG]}[H{I|L}][{M(Oxidation (M))|F}E]AV;[TP][QA]EV{[{M(Oxidation (M))|F}H]|[RQ]} 6.5611;5.5682;4.4454;4.2148;3.4526;3.222;2.6009;1.7956;1.764;1.6591 +;-;-;-;-;-;-;-;-;- + 323 1 2.497 76262.5 1.0 1775 4175 5949 HBL1_DMSO_200M_050219_2,5952 HBL1_DMSO_200M_050219_2,5952,DARPSVNAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5953 30.99 212.0 260850.0 25 0 22897.0 + 18524 KYQHTGAVL 9 67 508.7799540765662 1015.5453552199324 2 508.7801391482353 MULTI CID FTMS 0 0 0 5949 186175.84375 0.1641315053922696 -7 0.2701072692871094 4 Unmodified _KYQHTGAVL_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 18.1463463914782 0.3454829746528889 4 AV{I|L} 3 6 30.177 0.0 0.0 2.9715 0.0 0.0 714.3443913975295 0.0 714.3443913975295 0.0 23.187587626244124 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + AV{I|L} 2.9715 + + 47 1 2.497 48020.0 1.0 1776 4175 5949 HBL1_DMSO_200M_050219_2,5953 HBL1_DMSO_200M_050219_2,5953,KYQHTGAVL False True KYQHTGAVL 30.990393 508.780139148235 17611570.25 5949.0 nc|ENSG00000154473|O43684-2|BUB3;;ENSG00000154473|ENST00000368865|BUB3 5.095344066619873 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5955 31.001 442.0 137300.0 25 0 21284.0 + 24132 LYQDTHQEY 9 91 598.7647452985759 1195.5149376639515 2 598.7650024294853 MULTI CID FTMS 0 0 0 5954 190661.3125 0.3603793161823087 -4 0.0992107391357421 1 Unmodified _LYQDTHQEY_ ENSG00000164151|ENST00000296564|ICE1;ICE1|p.Y725Lfs*4|1|0.29|ENSG00000164151|chr5:5461508-5461508|A/-|frameshift_variant 43.77239144664712 0.0547478964384323 4 {I|L}Y{M(Oxidation (M))|F}YQDQ 7 6 79.148 0.0 0.0 6.6204 0.0 0.0 0.0 235.08333765201408 235.08333765201408 50.54043380181879 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.9436726795685342 1.325257498915995 {I|L}Y{M(Oxidation (M))|F}YQDQ 6.6204 - 1793 + 1 2.497 48665.0 1.0 1777 4176 5954 HBL1_DMSO_200M_050219_2,5955 HBL1_DMSO_200M_050219_2,5955,LYQDTHQEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5956 31.006 265.0 484050.0 25 0 47440.0 + 38718 TTVPTVHHV 9 135 330.85067182080354 989.5301860626108 3 330.8502380251884 MULTI CID FTMS 0 0 0 5954 174472.65625 0.866552168865709 -4 0.0992107391357421 2 Unmodified _TTVPTVHHV_ ENSG00000196678|ENST00000357967|ERI2;ENST00000568805.5_1_16:20809048-20811281:-|nuORF;nc|ENSG00000196678|A8K979-2|ERI2 23.1484247019978 0.2366544122328345 4 PTVHHV 6 3 27.167 0.0 0.0 2.7454 0.0 0.0 301.1632733328524 0.0 301.1632733328524 0.0 16.985926849692277 0.0 0.0 0 0.0 0.0 0.0 0.0 + PTVHHV 2.7454 + + 197 + 1 2.497 104340.6 1.0 1778 4176 5954 HBL1_DMSO_200M_050219_2,5956 HBL1_DMSO_200M_050219_2,5956,TTVPTVHHV False True TTVPTVHHV 31.005537 330.850238025188 4064531.25 5954.0 ENST00000568805.5_1_16:20809048-20811281:-|nuORF;;nc|ENSG00000196678|A8K979-2|ERI2;;ENSG00000196678|ENST00000357967|ERI2 8.050840377807617 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5957 31.018 740.0 488120.0 25 0 28560.0 -1 0 228 335.22404419412675 668.4335354550535 2 335.2235595583916 MULTI CID FTMS 0 0 0 5954 172155.53125 0.718143009215577 -3 0.07000732421875 3 4 GP{I|L}RKV 6 -1 + 85.547 0.0 0.0 12.798 12.798 96.684 0.0 0.0 0.0 43.552703616217954 12.307131330965715 12.307131330965715 13.464467979859336 0 1.1307196863200843 2.0 0.0 1.263632853717045 GP{I|L}RKV;GP{I|L}RVK;[PG]{I|L}RKV;GPV[R{I|L}]K;GPV[RK]{I|L};V[PA]RKV;GVKRP{I|L};VGKRP{I|L};V[PA]RVK;GVP[R{I|L}]K 12.798;10.784;6.8965;6.7763;6.5741;5.9811;4.6331;4.3679;3.9667;3.9568 -;-;-;-;-;-;-;-;-;- 192 + 1 2.497 283373.8 1.0 1779 4176 5954 HBL1_DMSO_200M_050219_2,5957 HBL1_DMSO_200M_050219_2,5957, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5958 31.032 800.0 169370.0 25 0 19995.0 + 27117 PFLKGGGG 8 185 366.7062047337232 731.3978565342464 2 366.7055847048759 MULTI CID FTMS 0 0 0 5954 109114.0859375 1.0 0 0.0 4 Unmodified _PFLKGGGG_ REV__ENST00000407595.2_1_2:56411641-56419673:+|nuORF 5.760428011301431 0.7893668129297577 4 PEV 3 -1 43.461 0.0 0.0 5.9421 0.0 0.0 0.0 403.2100924127563 403.2100924127563 32.49159686636801 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 PEV 5.9421 - 191 + 1 2.497 108014.4 0.959999978542328 1780 4176 5954 HBL1_DMSO_200M_050219_2,5958 HBL1_DMSO_200M_050219_2,5958,PFLKGGGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5960 31.037 48.0 1211500.0 25 0 136210.0 + 44714 YPHDPPKV 8 74 476.7481369075522 951.4817208819044 2 476.7482482790947 MULTI CID FTMS 0 0 0 5959 1226933.25 0.6721860232212639 -4 0.1117591857910156 1 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 68.08070601005525 0.1147890174299629 4 YPHDPPKV 8 0 + 69.18 0.0 0.0 7.2708 7.2708 93.743 0.0 0.0 0.0 42.71397942534385 9.060413759860992 9.060413759860992 20.032511901381863 0 1.6307196863200843 1.5228787452803376 0.0 0.0 + + YPHDPPKV;YPWYPKV;YWYPPKV;YPRR{[{M(Oxidation (M))|F}D]|MM}V;[KP][{I|L}T]DH{[QN]|[E{I|L}]|[KN]} 7.2708;5.1654;3.8276;3.408;2.2042 +;-;-;-;- + 169 + 1 2.492 51051.3 1.0 1781 4177 5959 HBL1_DMSO_200M_050219_2,5960 HBL1_DMSO_200M_050219_2,5960,YPHDPPKV True True YPHDPPKV 31.037147 476.748248279095 315573894.0 5959.0 ENSG00000130725|ENST00000253023|UBE2M;;ENST00000599829.1_1_19:59068052-59068363:-|nuORF;;ENST00000593801.1_1_19:59068052-59068513:-|nuORF 8.377805233001709 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5961 31.042 270.0 250100.0 25 0 49800.0 + 24924 MPPKAGQTI 9 90 471.7566710214138 941.4987891096276 2 471.7574340701103 MULTI CID FTMS 0 0 0 5959 187613.84375 0.6730586752825691 -37 0.9867572784423828 2 Unmodified _MPPKAGQTI_ ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB;nc|ENSG00000170322|Q6P4R8-3|NFRKB 24.020572477871973 0.2255576514309169 4 MP{[QN]|[E{I|L}]|[KN]}EKPV 8 6 + 60.129 0.0 0.0 6.3865 6.3865 90.44 0.0 0.0 0.0 41.13290021996811 4.736607226101555 4.736607226101555 17.713118258533385 0 0.3252574989159953 2.0 0.8494850021680094 0.0 MP{[QN]|[E{I|L}]|[KN]}EKPV;MP{[QN]|[E{I|L}]|[KN]}[VS]APV;[YV][HA]EKPV 6.3865;4.5052;1.2871 -;-;- 260 + 1 2.492 55319.4 1.0 1782 4177 5959 HBL1_DMSO_200M_050219_2,5961 HBL1_DMSO_200M_050219_2,5961,MPPKAGQTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5962 31.044 97.0 715180.0 25 0 49406.0 + 34390 SLTYPRDH 8 111 330.16662646320003 987.4780499898002 3 330.1661254763603 MULTI CID FTMS 0 0 0 5959 394925.125 0.7551647315188137 -5 0.1409626007080078 3 Unmodified _SLTYPRDH_ REV__ENSG00000113593|ENST00000261308|PPWD1;REV__nc|ENSG00000113593|Q96BP3-2|PPWD1 6.2057823575117 0.7866635192979977 4 {[DA]|[EG]}{M(Oxidation (M))|F}GHM 6 -1 43.912 0.0 0.0 4.4469 0.0 0.0 0.0 326.194733380698 326.194733380698 27.713949574709964 0.0 0.0 0.0 0 0.2396518287104437 2.0 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}GHM 4.4469 - 85 + 1 2.492 59159.4 1.0 1783 4177 5959 HBL1_DMSO_200M_050219_2,5962 HBL1_DMSO_200M_050219_2,5962,SLTYPRDH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5963 31.05 320.0 447300.0 25 0 53856.0 + 44772 YPLRPKKI 8 125 338.88692916927147 1013.6389581080144 3 338.8866149783134 MULTI CID FTMS 0 0 0 5959 224242.375 1.0 0 0.0 4 Unmodified _YPLRPKKI_ ENSG00000117697|ENST00000366977|NSL1 30.63653989081413 0.3996269429323407 4 YP{I|L}R[KP]K{I|L} 8 0 + 40.887 0.0 0.0 4.0337 4.0337 73.005 0.0 0.0 0.0 23.694116599473176 5.196918268477376 5.196918268477376 5.196918268477376 0 0.0 1.0457574905606752 0.0 0.6307196863200843 + + YP{I|L}R[KP]K{I|L};YP{I|L}R[KP]{I|L}K;Y{I|L}PR[KP]K{I|L};Y{I|L}PR[KP]{I|L}K 4.0337;3.521;3.299;2.7863 +;-;-;- + 152 + 1 2.492 121361.0 1.0 1784 4177 5959 HBL1_DMSO_200M_050219_2,5963 HBL1_DMSO_200M_050219_2,5963,YPLRPKKI False True YPLRPKKI 31.050049 338.886614978313 1629984.625 5959.0 ENSG00000117697|ENST00000366977|NSL1 0.9158615668614706 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5964 31.056 351.0 237220.0 25 0 33098.0 + 8878 FAEDGARTV 9 94 483.2382274755372 964.4619020178744 2 483.2380554080009 MULTI CID FTMS 0 0 0 5959 152080.328125 0.8771896415434889 -3 0.1029911041259765 5 Unmodified _FAEDGARTV_ ENSG00000157240|ENST00000287934|FZD1 27.628801355627647 0.1796483985696185 4 {M(Oxidation (M))|F}AEDSA{[QV]|[N{I|L}]|[RA]|[KV]}V 9 2 + 48.338 0.0 0.0 5.0119 5.0119 74.967 0.0 0.0 0.0 36.34820009305472 3.4678748622465605 3.4678748622465605 3.802112417116064 0 0.4247425010840047 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}AEDSA{[QV]|[N{I|L}]|[RA]|[KV]}V;{M(Oxidation (M))|F}AEDSA{[NV]|[RG]}{I|L};{M(Oxidation (M))|F}AV[MN][TP]SV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KP][YT]AE;{M(Oxidation (M))|F}[WE]SA{[QV]|[N{I|L}]|[RA]|[KV]}V;{M(Oxidation (M))|F}[C(Carbamidomethyl (C))N]QA{[QV]|[N{I|L}]|[RA]|[KV]}V;{M(Oxidation (M))|F}AV[MN][PS]TV;{M(Oxidation (M))|F}[C(Carbamidomethyl (C))N]QA{[NV]|[RG]}{I|L};{M(Oxidation (M))|F}[WE]SA{[NV]|[RG]}{I|L};{M(Oxidation (M))|F}AV[MN][PS]S{I|L} 5.0119;4.6177;2.0309;1.9922;1.8274;1.8274;1.7188;1.4332;1.4332;1.3246 -;-;-;-;-;-;-;-;-;- 259 + 1 2.492 69890.7 1.0 1785 4177 5959 HBL1_DMSO_200M_050219_2,5964 HBL1_DMSO_200M_050219_2,5964,FAEDGARTV False True FAEDGARTV 31.056381 483.238055408001 920482.625 5959.0 ENSG00000157240|ENST00000287934|FZD1 3.57363224029541 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5966 31.061 39.0 1171800.0 25 0 80875.0 27044 PEQNDRTPL 9 69 535.2675157962208 1068.5204786592417 2 535.2675659060478 MULTI CID FTMS 0 0 0 5965 1543999.375 0.8004688629021545 3 -0.1318225860595703 1 Unmodified _PEQNDRTPL_ ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;ENST00000544562.5_1_14:23067206-23078652:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4 25.399314129420983 0.2080152500878129 4 [EP]QDTR[NP]{I|L} 9 3 + 45.198 0.0 0.0 4.23 4.23 78.427 0.0 0.0 0.0 23.32650597641134 11.879165495209278 11.879165495209278 9.208187539523747 0 0.3807196863200844 0.0 0.8252574989159953 0.3807196863200844 [EP]QDTR[NP]{I|L};[EP][AG]DTR[NP]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}RR{[WT]|[RM]}[HA] 4.23;3.3682;0.18164 -;-;- 199 + 1 2.492 41115.7 1.0 1786 4178 5965 HBL1_DMSO_200M_050219_2,5966 HBL1_DMSO_200M_050219_2,5966,PEQNDRTPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5967 31.062 54.0 1218300.0 25 0 214840.0 6505 EAKGGGVV 8 70 358.70069473809343 715.3868365429869 2 358.7004272341728 MULTI CID FTMS 0 0 0 5965 1216038.125 0.8501923010369434 2 -0.0873947143554687 2 Unmodified _EAKGGGVV_ ENSG00000187867|ENST00000669674|PALM3;nc|ENSG00000187867|A6NDB9|PALM3 19.438996006549623 0.6237395211498085 4 EA{I|L}ERV 6 5 + 67.528 0.0 0.0 9.4394 9.4394 80.378 0.0 0.0 0.0 31.42667503568731 0.2996322337744317 0.2996322337744317 0.2996322337744317 0 0.2614393726401688 1.5228787452803376 0.4247425010840047 0.2742275032520141 EA{I|L}ERV;EA{I|L}EVR;EA{I|L}VER;EAV{I|L}ER;EA{I|L}VWV;EAV{I|L}WV;E[KT][KG][PG] 9.4394;9.3975;9.1256;8.2685;8.0416;7.3746;0.34445 -;-;-;-;-;-;- 112 + 1 2.492 57443.1 1.0 1787 4178 5965 HBL1_DMSO_200M_050219_2,5967 HBL1_DMSO_200M_050219_2,5967,EAKGGGVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5968 31.064 52.0 1032000.0 25 0 98110.0 + 25054 MPVAEGKSV 9 78 459.2416184024322 916.4686838716644 2 459.2417785525322 MULTI CID FTMS 0 0 0 5965 1136963.625 0.9780594125584652 -1 0.0242652893066406 3 Unmodified _MPVAEGKSV_ ENSG00000124641|ENST00000265350|MED20;ENST00000467535.5_1_6:41880803-41888587:-|nuORF;nc|ENSG00000288721|Q9H944-2|MED20 69.10491478415734 0.0214449631113747 4 MPVAE[KG]SV 9 0 + 78.562 0.0 0.0 8.5723 8.5723 97.526 0.0 0.0 0.0 39.38857232916224 4.762135550188063 4.762135550188063 34.832881222565256 0 1.4559771852360797 1.3979400086720375 0.9802046884880936 0.0 + + MPVAE[KG]SV;MPV[{M(Oxidation (M))|F}V][EP]V;M[{I|L}T]VSAQ[PA];[{M(Oxidation (M))|F}T]SPVAQ[PA];M[{I|L}T]SVAQ[PA];[{M(Oxidation (M))|F}T]PVSAQ[PA];[{M(Oxidation (M))|F}T]PSVAQ[PA] 8.5723;4.7715;0.91457;0.80883;0.80883;0.58611;0.48036 +;-;-;-;-;-;- + 518 + 1 2.492 48362.8 1.0 1788 4178 5965 HBL1_DMSO_200M_050219_2,5968 HBL1_DMSO_200M_050219_2,5968,MPVAEGKSV True True MPVAEGKSV 31.063782 459.241778552532 7475095.5 5965.0 nc|ENSG00000288721|Q9H944-2|MED20;;ENST00000467535.5_1_6:41880803-41888587:-|nuORF;;ENSG00000124641|ENST00000265350|MED20 5.708729426066081 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5969 31.067 161.0 456540.0 25 0 45277.0 + 38732 TVADHIQKV 9 103 337.52648706155594 1009.557631784868 3 337.5256530642509 MULTI CID FTMS 0 0 0 5965 282060.9375 0.6333991554677927 -2 0.0660171508789062 4 Unmodified _TVADHIQKV_ ENSG00000181789|ENST00000314797|COPG1 18.1463463914782 0.3454829746528889 4 {[TV]|[{I|L}S]}WH 4 6 37.435 0.0 0.0 3.7081 0.0 0.0 0.0 483.29364954166255 483.29364954166255 16.783051500547348 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}WH 3.7081 - 227 + 1 2.492 67667.7 1.0 1789 4178 5965 HBL1_DMSO_200M_050219_2,5969 HBL1_DMSO_200M_050219_2,5969,TVADHIQKV False True TVADHIQKV 31.066939 337.525653064251 3990072.875 5965.0 ENSG00000181789|ENST00000314797|COPG1 5.624645868937175 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5970 31.072 296.0 244120.0 25 0 34443.0 + 38733 TVADHIQKV 9 106 505.78521471531104 0 505.7849914431572 PEAK CID FTMS 0 0 0 5965 129139.609375 0.5134491180036495 -3 0.0905208587646484 5 Unmodified _TVADHIQKV_ ENSG00000181789|ENST00000314797|COPG1 56.17704186161178 0.0208571546621878 4 ADH{I|L}Q 5 4 21.682 0.0 0.0 2.1477 0.0 0.0 200.11594411418872 242.15114771060783 442.2670918247966 0.0 0.0 0.0 0.0 0 0.9731975075880328 0.0 0.0 0.4247425010840047 + ADH{I|L}Q 2.1477 + + 62 + 1 2.492 60623.4 1.0 1790 4178 5965 HBL1_DMSO_200M_050219_2,5970 HBL1_DMSO_200M_050219_2,5970,TVADHIQKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5972 31.089 800.0 72516.0 25 0 6099.1 -1 0 81 606.6464545331977 1816.917534199793 3 606.6468383669853 MULTI CID FTMS 0 0 0 5971 90071.59375 0.8296314312791571 1 -0.071502685546875 1 4 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}A{I|L}E[PS]D 10 -1 54.174 0.0 0.0 2.9816 0.0 0.0 0.0 755.407750594302 755.407750594302 35.97295930833134 0.0 0.0 0.0 0 1.0 2.0 0.0 0.6549471895720985 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}A{I|L}E[PS]D 2.9816 - 481 1 2.492 49006.2 0.5199999809265137 1791 4179 5971 HBL1_DMSO_200M_050219_2,5972 HBL1_DMSO_200M_050219_2,5972, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5973 31.102 800.0 113130.0 25 0 11448.0 + -1 CAEASEDRPF 10 83 591.2474219697533 1180.4802910063063 2 591.2466308474541 MULTI CID FTMS 0 0 0 5971 113590.1484375 0.9756880882624424 -4 0.1064128875732421 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))AEASEDRPF_ REV__ENSG00000171487|ENST00000390649|NLRP5 5.731851221503515 0.7001233259664787 4 [YV][DP][KC]PY 8 -1 22.369 0.0 0.0 1.8949 0.0 0.0 0.0 212.0318308847724 212.0318308847724 9.269856214892371 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [YV][DP][KC]PY 1.8949 - 305 1 2.492 71348.6 0.5400000214576721 1792 4179 5971 HBL1_DMSO_200M_050219_2,5973 HBL1_DMSO_200M_050219_2,5973,CAEASEDRPF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5974 31.116 800.0 163550.0 25 0 23663.0 + 22141 LPPQQQQRI 9 128 554.3167948624847 1106.6190367917693 2 554.3168823122978 MULTI CID FTMS 0 0 0 5971 103961.5078125 0.8954186737271593 15 -0.4612388610839844 3 Unmodified _LPPQQQQRI_ ENSG00000109606|ENST00000336812|DHX15;ENST00000336812.4_1_4:24550520-24550565:-|nuORF 20.453626601364224 0.2830276176381075 4 {I|L}PPQQ 5 4 52.206 0.0 0.0 4.7176 0.0 0.0 0.0 540.2907794773206 540.2907794773206 40.9471653193118 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPQQ 4.7176 + + 572 + 1 2.492 104551.3 0.5400000214576721 1793 4179 5971 HBL1_DMSO_200M_050219_2,5974 HBL1_DMSO_200M_050219_2,5974,LPPQQQQRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5975 31.13 800.0 82490.0 25 0 7973.3 -1 IFKCSVQYAN 10 92 615.3047490698591 1228.594945206518 2 615.3055908083916 MULTI CID FTMS 0 0 0 5971 101509.421875 0.6700469474077438 -2 0.0401573181152343 4 Carbamidomethyl (C) _IFKC(Carbamidomethyl (C))SVQYAN_ ENST00000426194.1_1_18:30353372-30353567:+|nuORF 27.628801355627647 0.3479284626772844 4 DP[WK]PSQSAN 10 -1 68.824 0.0 0.0 5.6018 0.0 0.0 100.06428725410312 0.0 100.06428725410312 0.0 48.99079424672394 0.0 0.0 0 1.0 0.0 2.2104093769761874 0.0 DP[WK]PSQSAN 5.6018 - 961 1 2.492 55929.1 0.5 1794 4179 5971 HBL1_DMSO_200M_050219_2,5975 HBL1_DMSO_200M_050219_2,5975,IFKCSVQYAN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 5976 31.144 800.0 70757.0 25 0 2938.1 7281 EETVMSARDRY 11 93 678.8119762528821 1355.609399572564 2 678.8129760622978 MULTI CID FTMS 0 0 0 5971 90610.1484375 1.0 0 0.0 5 Unmodified _EETVMSARDRY_ ENSG00000126653|ENST00000247026|NSRP1 8.745405648335112 0.8338865417133445 4 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F} 13 11 + 72.654 0.0 0.0 5.3595 5.3595 74.289 0.0 0.0 0.0 5.770670381819357 11.282487900354964 5.770670381819357 2.756158978292831 0 0.2215141619232908 0.8860566476931632 0.0 1.4124379954164592 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q[HV]EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[HV]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG[HV]EAQQNA{M(Oxidation (M))|F};EE[YK]EAQQNA{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V][R{M(Oxidation (M))|F}]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA[HV]EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA[HV]EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA[HV]EA[AG]QNA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}PHDEAQQNA{M(Oxidation (M))|F} 5.3595;5.1562;4.9338;4.9085;4.8532;4.7525;4.6903;4.6903;4.6903;4.5842 -;-;-;-;-;-;-;-;-;- 612 1 2.492 45161.6 0.4600000083446502 1795 4179 5971 HBL1_DMSO_200M_050219_2,5976 HBL1_DMSO_200M_050219_2,5976,EETVMSARDRY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5978 31.148 10.0 8028900.0 25 0 1371200.0 + 44717 YPHDPPKV 8 87 318.16810558323687 951.4824873499106 3 318.1677734255791 MULTI CID FTMS 0 0 0 5977 5431012.5 0.9291015543639916 -3 0.1116600036621093 1 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 25.399314129420983 0.5099049743284904 4 YPHDPPKV 8 0 + 38.511 0.0 0.0 4.0475 4.0475 72.359 0.0 0.0 0.0 14.258819170843609 8.927900303521312 8.927900303521312 4.662355562743272 0 0.718765315847925 0.0 0.0 0.0 + + YPHDPPKV;YWYPPKV;YPHDPV[KP];YPWYPKV;YPHDVP[KP];YWYPV[KP];YWYVP[KP];YPWYV[KP] 4.0475;3.5575;3.1092;2.9529;2.7928;2.6192;2.3028;2.0146 +;-;-;-;-;-;-;- + 146 + 1 2.492 71865.0 1.0 1796 4180 5977 HBL1_DMSO_200M_050219_2,5978 HBL1_DMSO_200M_050219_2,5978,YPHDPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5979 31.153 242.0 421270.0 25 0 83563.0 + 33266 SFPASSGVSH 10 94 488.23034326897925 974.4461336047584 2 488.2312499880791 MULTI CID FTMS 0 0 0 5977 164293.015625 0.2229735879407283 71 -2.771024703979492 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 41.8396318013385 0.1381409678234242 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASKDSH 9 3 + 71.659 0.0 0.0 7.3538 7.3538 85.672 0.0 0.0 0.0 49.4676842994688 14.973024840566474 14.973024840566474 5.228787452803374 0 0.3807196863200844 2.0 0.9258337024346172 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASKDSH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PASS[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H 7.3538;6.8172;5.4588 -;+;- + 195 + 1 2.492 83478.4 1.0 1797 4180 5977 HBL1_DMSO_200M_050219_2,5979 HBL1_DMSO_200M_050219_2,5979,SFPASSGVSH False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5980 31.157 185.0 497650.0 25 0 60041.0 + 18526 KYQHTGAVL 9 91 339.5226710415807 1015.546183724942 3 339.5221130251884 MULTI CID FTMS 0 0 0 5977 337034.71875 1.0 0 0.0 3 Unmodified _KYQHTGAVL_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 13.90604991867851 0.4602628045680013 4 A{[SA]|[TG]}HC(Carbamidomethyl (C))K{I|L} 7 7 20.75 0.0 0.0 2.0432 0.0 0.0 230.16280672253885 0.0 230.16280672253885 0.0 13.759876934359454 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 A{[SA]|[TG]}HC(Carbamidomethyl (C))K{I|L} 2.0432 - 255 + 1 2.492 74389.7 1.0 1798 4180 5977 HBL1_DMSO_200M_050219_2,5980 HBL1_DMSO_200M_050219_2,5980,KYQHTGAVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5981 31.161 216.0 272980.0 25 0 14881.0 + 34774 SQDEIKQEV 9 105 538.2670379648188 0 538.2669555544853 PEAK CID FTMS 0 0 0 5977 219662.84375 0.8068236939409807 -3 0.1116600036621093 4 Unmodified _SQDEIKQEV_ ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-2|DNA2;nc|ENSG00000138346|P51530-3|DNA2;nc|ENSG00000138346|P51530-4|DNA2 47.7319792270244 0.0378718497375857 4 {I|L}EDN 4 8 19.373 0.0 0.0 1.803 0.0 0.0 502.2788136231937 98.02520929508046 600.3040229182741 0.0 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.3252574989159953 0.25 {I|L}EDN 1.803 - 169 + 1 2.492 51761.8 1.0 1799 4180 5977 HBL1_DMSO_200M_050219_2,5981 HBL1_DMSO_200M_050219_2,5981,SQDEIKQEV True True SQDEIKQEV 31.160617 538.266955554485 1645548.125 5977.0 nc|ENSG00000138346|P51530-3|DNA2;;ENSG00000138346|ENST00000358410|DNA2;;nc|ENSG00000138346|P51530-4|DNA2;;nc|ENSG00000138346|P51530-2|DNA2 4.186558246612549 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5982 31.174 800.0 224940.0 25 0 18298.0 + 13233 HHPDYNNEL 9 146 569.7490046105385 1137.4834562878768 2 569.7494384646416 MULTI CID FTMS 0 0 0 5977 194293.953125 0.047576236833944 -14 0.5384654998779297 5 Unmodified _HHPDYNNEL_ ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11 61.357469665136826 0.0253304979873734 4 HH[DP]YNNE{I|L} 9 0 + 74.038 0.0 0.0 6.5089 6.5089 87.629 0.0 0.0 0.0 23.010299956639813 14.973024840566469 14.973024840566469 9.208187539523747 0 0.3252574989159953 1.3979400086720375 0.8684151806525389 0.9247425010840048 + + HH[DP]YNNE{I|L};HH[DP]YNGGE{I|L};HH[DP]YGGNE{I|L};[DP]HHYNNE{I|L};HH[YN][DP]NE{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HD]YNNE{I|L};[DP]YNNHHE{I|L};[DP]YHHNNE{I|L};[DP]HHYGGNE{I|L};[DP]HHYNGGE{I|L} 6.5089;5.6994;5.6994;4.486;4.1283;4.1175;4.0817;4.043;3.6765;3.6765 +;-;-;-;-;-;-;-;-;- + 2985 1 2.492 136859.5 0.7400000095367432 1800 4180 5977 HBL1_DMSO_200M_050219_2,5982 HBL1_DMSO_200M_050219_2,5982,HHPDYNNEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5983 31.188 800.0 149230.0 25 0 16538.0 + 24735 MPDSDSASSDV 11 140 555.7161449256914 1109.4177369181828 2 555.7161132693291 MULTI CID FTMS 0 0 0 5977 122764.546875 0.9255491262748942 2 -0.0625743865966796 6 Unmodified _MPDSDSASSDV_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 9.38312468134398 0.8308777417566128 4 MP 2 -1 32.805 0.0 0.0 2.957 0.0 0.0 0.0 878.3063448541624 878.3063448541624 11.245980483695774 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 MP 2.957 + + 547 + 1 2.492 94914.1 0.6000000238418579 1801 4180 5977 HBL1_DMSO_200M_050219_2,5983 HBL1_DMSO_200M_050219_2,5983,MPDSDSASSDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5985 31.193 17.0 3418400.0 25 0 438700.0 + 21982 LPPPAAKTV 9 73 447.2761269222121 892.5377009112242 2 447.2763854861259 MULTI CID FTMS 0 0 0 5984 3564976.5 0.968566153334542 -2 0.1159305572509765 1 Unmodified _LPPPAAKTV_ ENSG00000168894|ENST00000306368|RNF181;ENST00000461845.1_1_2:85822886-85823939:+|nuORF 31.26834338654808 0.1333407332142048 4 {I|L}PPP 4 5 55.547 0.0 0.0 6.2235 0.0 0.0 0.0 485.2718294733032 485.2718294733032 45.36638314497068 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 + {I|L}PPP 6.2235 + + 85 + 1 2.492 48649.6 1.0 1802 4181 5984 HBL1_DMSO_200M_050219_2,5985 HBL1_DMSO_200M_050219_2,5985,LPPPAAKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5986 31.194 31.0 1489000.0 25 0 161410.0 + 3689 DAFGHKSNI 9 84 494.7462451567021 987.4779373802044 2 494.7460815310478 MULTI CID FTMS 0 0 0 5984 1772824.625 0.8597924921002085 1 -0.0181465148925781 2 Unmodified _DAFGHKSNI_ ENSG00000134058|ENST00000256443|CDK7;ENST00000512687.5_1_5:68530748-68551520:+|nuORF 29.43715596616401 0.1566398223704148 4 {[DA]|[EG]}{M(Oxidation (M))|F}GK{M(Oxidation (M))|F}GH 8 4 50.76 0.0 0.0 5.1404 0.0 0.0 0.0 125.07244287662344 125.07244287662344 38.28579317617576 0.0 0.0 0.0 0 0.6861818737241735 1.6989700043360187 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}GK{M(Oxidation (M))|F}GH 5.1404 - 275 + 1 2.492 38394.8 1.0 1803 4181 5984 HBL1_DMSO_200M_050219_2,5986 HBL1_DMSO_200M_050219_2,5986,DAFGHKSNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5987 31.197 143.0 431640.0 25 0 66043.0 + 41216 VPEYIELM 8 61 497.2539101224504 992.4932673117008 2 497.2536193728447 MULTI CID FTMS 0 0 0 5984 405642.9375 0.2944761084266624 12 -0.3200035095214844 3 Unmodified _VPEYIELM_ REV__ENSG00000108622|ENST00000579788|ICAM2 26.34127834903884 0.4900704351052977 4 VPESS 5 -1 63.672 0.0 0.0 6.4154 0.0 0.0 0.0 490.2425468742657 490.2425468742657 36.22486274231747 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.8494850021680094 0.0 VPESS 6.4154 - 86 + 1 2.492 52433.0 1.0 1804 4181 5984 HBL1_DMSO_200M_050219_2,5987 HBL1_DMSO_200M_050219_2,5987,VPEYIELM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 5988 31.201 213.0 280690.0 25 0 30606.0 + 16744 KFIEKAQNM 9 93 554.7948100076565 1107.5750670821128 2 554.7961303591728 MULTI CID FTMS 0 0 0 5984 223668.6875 0.4759807354567442 -5 0.1978397369384765 4 Unmodified _KFIEKAQNM_ ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1 40.23920728925047 0.0741434193262949 4 K{M(Oxidation (M))|F}{I|L}E 4 5 44.042 0.0 0.0 3.9765 0.0 0.0 0.0 587.2629488580686 587.2629488580686 23.58471912431625 0.0 0.0 0.0 0 1.5114393726401687 0.0 0.0 0.0 + K{M(Oxidation (M))|F}{I|L}E 3.9765 + + 245 + 1 2.492 51257.7 1.0 1805 4181 5984 HBL1_DMSO_200M_050219_2,5988 HBL1_DMSO_200M_050219_2,5988,KFIEKAQNM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5989 31.206 299.0 275580.0 25 0 13011.0 + 22268 EQYVTKTV 8 117 484.2718225992972 966.5290922653944 2 484.2714111208916 MULTI CID FTMS 0 0 0 5984 63580.3828125 1.0 0 0.0 5 Unmodified _LPRPPCVSV_ ENSG00000119285|ENST00000366582|HEATR1 16.942295170755138 0.3780752226737986 4 [KT]VTYAVSV 9 6 + 38.581 0.0 0.0 3.9917 3.9917 69.58 0.0 0.0 0.0 1.517412290202671 6.72096315272664 1.517412290202671 3.0102999566398125 0 0.5796896906561032 0.0 0.2215141619232908 0.4247425010840047 [KT]VTYAVSV;[KT]TVYAVSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YVTKTV;[R{M(Oxidation (M))|F}]{[ES]|[DT]|[{I|L}C]}TKTV;{[MS]|[{M(Oxidation (M))|F}A]}{[DS]|[MA]|[CV]|TT}VTKTV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YVTTKV;[R{M(Oxidation (M))|F}]AY[KP]SV;{[TV]|[{I|L}S]}KTYAVSV;[R{M(Oxidation (M))|F}]{[ES]|[DT]|[{I|L}C]}TTKV;[YV]T[KT]AVSV 3.9917;3.6802;3.4526;2.8864;2.8444;2.7759;2.737;2.2816;2.2097;2.204 -;-;-;-;-;-;-;-;-;- 600 1 2.492 66721.6 1.0 1806 4181 5984 HBL1_DMSO_200M_050219_2,5989 HBL1_DMSO_200M_050219_2,5989,LPRPPCVSV False False EQYVTKTV 31.206415 484.271411120892 717191.8125 5984.0 ENSG00000119285|ENST00000366582|HEATR1 3.582202752431234 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5991 31.223 800.0 122340.0 25 0 7338.8 + 241 AAVSRVVEA 9 151 451.2582408435629 900.5019287539259 2 451.2585632205009 MULTI CID FTMS 0 0 0 5990 44377.42578125 0.4651852064777102 1 -0.0373802185058593 1 Unmodified _AAVSRVVEA_ ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40 24.99096001346401 0.2132109383330889 4 AAV 3 6 28.244 0.0 0.0 3.1365 0.0 0.0 0.0 656.3372896783811 656.3372896783811 13.82445542632836 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 + AAV 3.1365 + + 237 + 1 2.492 80078.7 0.4600000083446502 1807 4182 5990 HBL1_DMSO_200M_050219_2,5991 HBL1_DMSO_200M_050219_2,5991,AAVSRVVEA False True AAVSRVVEA 31.222594 451.258563220501 521124.875 5990.0 ENST00000493683.5_1_16:30773821-30780773:+|nuORF;;ENSG00000103549|ENST00000324685|RNF40;;nc|ENSG00000103549|O75150-4|RNF40;;nc|ENSG00000103549|O75150-3|RNF40 1.6303470532099409 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5992 31.23 411.0 238090.0 25 0 32910.0 + 13860 HVIENLHAA 9 104 502.26897562532616 1002.5233983174523 2 502.2665283083916 MULTI CID FTMS 0 0 0 5990 98865.3984375 1.0 0 0.0 2 Unmodified _HVIENLHAA_ ENSG00000140740|ENST00000268379|UQCRC2;ENST00000563711.5_1_16:21973998-21987565:+|nuORF 28.49450938151212 0.1686335738423394 4 [HV]{I|L}EN{I|L}HAA 9 0 + 60.596 0.0 0.0 6.0443 6.0443 56.879 0.0 0.0 0.0 21.655462488490684 20.72559982972642 20.72559982972642 0.0 0 0.7742275032520141 2.0 0.0 0.0 + + [HV]{I|L}EN{I|L}HAA;[HV]{I|L}EQVHAA;[HV]{I|L}E[AG]VHAA;[HV]{I|L}EGG{I|L}HAA;{[DA]|[EG]}{[VA]|[{I|L}G]}HV{I|L}HAA;{[DA]|[EG]}{[VA]|[{I|L}G]}H{I|L}VHAA;[HV][HK][HQ]{M(Oxidation (M))|F}A;[HV][HQ][HK]{M(Oxidation (M))|F}A;[HV]{I|L}[QT][YT]AA;HV[HQ][HA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 6.0443;6.0443;5.1258;5.1258;3.8749;3.8749;3.7797;3.5545;3.3318;3.3305 +;-;-;-;-;-;-;-;-;- + 530 1 2.492 79467.6 1.0 1808 4182 5990 HBL1_DMSO_200M_050219_2,5992 HBL1_DMSO_200M_050219_2,5992,HVIENLHAA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5993 31.244 800.0 50350.0 25 0 7573.5 -1 0 39 1082.7948672808575 3245.3627724427724 3 1083.127246081829 MULTI CID FTMS 0 0 0 5990 87059.9765625 0.9799345894048272 -4 0.1499691009521484 3 4 G 1 -1 6.9897 0.0 0.0 0.21537 0.0 0.0 1653.5784593202163 1531.7308996569664 3185.3093589771825 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21537 - 9 + 1 2.492 42147.8 0.3799999952316284 1809 4182 5990 HBL1_DMSO_200M_050219_2,5993 HBL1_DMSO_200M_050219_2,5993, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 5995 31.248 33.0 1215500.0 25 0 132730.0 + 4316 DARPSVNAV 9 72 464.74607015314143 927.4775873730828 2 464.7461730837822 MULTI CID FTMS 0 0 0 5994 1797058.0 0.9309586537798414 1 -0.028757095336914 1 Unmodified _DARPSVNAV_ ENSG00000087053|ENST00000346299|MTMR2;ENSG00000171100|ENST00000370396|MTM1;nc|ENSG00000087053|Q13614-2|MTMR2;nc|ENSG00000171100|Q13496-2|MTM1 31.26834338654808 0.1333407332142048 4 {[DA]|[EG]}R[PS]VNAV 9 0 + 59.359 0.0 0.0 6.4 6.4 87.208 0.0 0.0 0.0 10.290456128171996 42.70303756120384 10.290456128171996 9.208187539523747 0 0.9247425010840048 1.0969100130080565 0.4247425010840047 0.0 + + {[DA]|[EG]}R[PS]VNAV;{[DA]|[EG]}R[PS]VGGAV;{[NV]|[RG]}[PS]EVNAV;{[NV]|[RG]}[PS]EVGGAV;{[NV]|[RG]}[PS]ARDAV;{[NV]|[RG]}[PS]RADAV;{[NV]|[RG]}[PS]A[VG]DAV;{[NV]|[RG]}[PS][VG]ADAV;{[NV]|[RG]}[PS][VG]WAV;{[NV]|[RG]}[PS]A[VG]WV 6.4;5.4072;4.5453;3.5525;3.1137;2.7891;2.1208;1.7963;1.7411;0.87746 +;-;-;-;-;-;-;-;-;- + 232 1 2.492 38922.6 1.0 1810 4183 5994 HBL1_DMSO_200M_050219_2,5995 HBL1_DMSO_200M_050219_2,5995,DARPSVNAV False True DARPSVNAV 31.24839 464.746173083782 39560109.0 5994.0 nc|ENSG00000087053|Q13614-2|MTMR2;;ENSG00000087053|ENST00000346299|MTMR2;;nc|ENSG00000171100|Q13496-2|MTM1;;ENSG00000171100|ENST00000370396|MTM1 6.663005669911702 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5996 31.25 35.0 1524600.0 25 0 179340.0 + 24942 MPPPPPQGV 9 87 468.236188042907 934.457823152614 2 468.2365905642509 MULTI CID FTMS 0 0 0 5994 1669852.5 0.9620311943123956 -14 0.4657363891601562 2 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 5 4 22.369 0.0 0.0 2.3937 0.0 0.0 0.0 396.1881864082457 396.1881864082457 2.4605143320419174 0.0 0.0 0.0 0 0.5941876774005248 0.0 0.5 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 2.3937 + + 161 1 2.492 49957.5 1.0 1811 4183 5994 HBL1_DMSO_200M_050219_2,5996 HBL1_DMSO_200M_050219_2,5996,MPPPPPQGV True False MPPPPPQGV 31.249569 468.236590564251 374982300.0 5994.0 ENSG00000164754|ENST00000297338|RAD21;;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 9.048047224680582 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5997 31.251 69.0 766880.0 25 0 65902.0 + 18525 KYQHTGAVL 9 77 508.7799540765662 1015.5453552199324 2 508.7800475955009 MULTI CID FTMS 0 0 0 5994 906506.5 0.7991706845312874 1 -0.028757095336914 3 Unmodified _KYQHTGAVL_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 29.081581746732265 0.1611639662936252 4 [QT]HQ[YK]V{I|L} 8 5 + 29.313 0.0 0.0 2.8864 2.8864 68.328 0.0 0.0 0.0 0.6356056965476213 13.828277768876523 0.6356056965476213 3.979400086720375 0 0.5 0.0 0.3494850021680094 0.6203715150305281 [QT]HQ[YK]V{I|L};[HT]QQ[YK]V{I|L};{[SA]|[TG]}AHQ[YK]V{I|L};[HT][R{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}V{I|L};[QT]H[AG][YK]V{I|L};[HT][AG]Q[YK]V{I|L};[HT]Q[AG][YK]V{I|L};{[SA]|[TG]}AH[AG][YK]V{I|L} 2.8864;2.4946;2.4274;2.1632;1.9744;1.5825;1.5825;1.2847 -;-;-;-;-;-;-;- 202 1 2.492 49547.5 1.0 1812 4183 5994 HBL1_DMSO_200M_050219_2,5997 HBL1_DMSO_200M_050219_2,5997,KYQHTGAVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5998 31.258 351.0 311710.0 25 0 40702.0 12534 GVGPIRKV 8 124 413.2681239542042 824.5216949752084 2 413.2675048708916 MULTI CID FTMS 0 0 0 5994 171056.765625 0.4660523860783425 5 -0.1340408325195312 4 Unmodified _GVGPIRKV_ ENSG00000047932|ENST00000368498|GOPC;nc|ENSG00000047932|Q9HD26-2|GOPC;nc|ENSG00000047932|Q9HD26-3|GOPC 26.34127834903884 0.4900704351052977 4 [VG]GP 4 4 39.169 0.0 0.0 4.7505 0.0 0.0 0.0 511.3368624322874 511.3368624322874 22.079694176538982 0.0 0.0 0.0 0 0.5356668758921829 2.0 0.0 0.0 + [VG]GP 4.7505 + + 116 + 1 2.492 90523.8 1.0 1813 4183 5994 HBL1_DMSO_200M_050219_2,5998 HBL1_DMSO_200M_050219_2,5998,GVGPIRKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 5999 31.268 584.0 168780.0 25 0 14222.0 + 12040 GQDINPQRV 9 111 513.7697881996942 1025.5250234661885 2 513.7720214724541 MULTI CID FTMS 0 0 0 5994 112212.1875 0.2622656726233404 -11 0.3525772094726562 5 Unmodified _GQDINPQRV_ ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;ENST00000557366.5_1_14:68270819-68282710:-|nuORF;ENST00000557407.1_1_14:68264347-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-4|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 56.17704186161178 0.0281986971544335 4 {[QG]|[NA]}D{I|L}NPQ[RV] 9 0 + 53.917 0.0 0.0 5.2575 5.2575 78.301 0.0 0.0 0.0 30.651182078731512 3.99674684468792 3.99674684468792 5.617968113107068 0 1.0 0.721246399047171 0.0 0.6861818737241735 + + {[QG]|[NA]}D{I|L}NPQ[RV];{[QG]|[NA]}D{I|L}NV{[NV]|[RG]}[PA];{[QG]|[NA]}VENPQ[RV];{[QG]|[NA]}D{I|L}VN{[NV]|[RG]}[PA];{[QG]|[NA]}D{I|L}NP[AG][RV];{[QG]|[NA]}D{I|L}GGPQ[RV];{[QG]|[NA]}VENV{[NV]|[RG]}[PA];{[QG]|[NA]}D{I|L}VNP{[{M(Oxidation (M))|F}H]|[RQ]};{[QG]|[NA]}D{I|L}GGV{[NV]|[RG]}[PA];{[QG]|[NA]}VEVN{[NV]|[RG]}[PA] 5.2575;4.7097;4.5971;4.4591;4.3596;4.3596;4.0493;3.9179;3.8161;3.7987 +;-;-;-;-;-;-;-;-;- + 628 + 1 2.492 78519.1 1.0 1814 4183 5994 HBL1_DMSO_200M_050219_2,5999 HBL1_DMSO_200M_050219_2,5999,GQDINPQRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6000 31.272 254.0 233760.0 25 0 15321.0 + -1 MMISPYLS 8 88 479.2260323737172 0 479.2270385622978 PEAK CID FTMS 0 0 0 5994 86885.875 1.0 0 0.0 6 Oxidation (M) _M(Oxidation (M))MISPYLS_ REV__ENSG00000062822|ENST00000440232|POLD1 13.50788311687929 0.5021269579892848 4 P 1 -1 9.2048 0.0 0.0 0.96241 0.0 0.0 244.08682033134068 612.2749119596662 856.3617322910068 0.0 0.0 0.0 0.0 0 0.2215141619232908 0.0 0.0 0.0 P 0.96241 + + 33 + 1 2.492 53747.7 1.0 1815 4183 5994 HBL1_DMSO_200M_050219_2,6000 HBL1_DMSO_200M_050219_2,6000,MMISPYLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6002 31.288 663.0 194190.0 25 0 25429.0 + 24133 LYQDTHQEY 9 115 598.7647452985759 1195.5149376639515 2 598.7647582888603 MULTI CID FTMS 0 0 0 6001 287765.0625 0.5439203952029299 4 -0.1052837371826171 1 Unmodified _LYQDTHQEY_ ENSG00000164151|ENST00000296564|ICE1;ICE1|p.Y725Lfs*4|1|0.29|ENSG00000164151|chr5:5461508-5461508|A/-|frameshift_variant 70.33199760932243 0.0209706178985989 4 {I|L}YQ{M(Oxidation (M))|F}YDQ 7 5 85.711 0.0 0.0 7.1694 0.0 0.0 0.0 235.08435999088127 235.08435999088127 27.56774968260533 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.7302046884880937 1.6989700043360187 {I|L}YQ{M(Oxidation (M))|F}YDQ 7.1694 - 6638 + 1 2.504 99936.1 1.0 1816 4184 6001 HBL1_DMSO_200M_050219_2,6002 HBL1_DMSO_200M_050219_2,6002,LYQDTHQEY True True LYQDTHQEY 31.28779 598.76475828886 7516206.0 6001.0 ENSG00000164151|ENST00000296564|ICE1;;ICE1|p.Y725Lfs*4|1|0.29|ENSG00000164151|chr5:5461508-5461508|A/-|frameshift_variant 8.971735318501791 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6003 31.29 132.0 374000.0 25 0 63152.0 + 29926 QSISNENE 8 66 460.70159897724 919.38864502128 2 460.7018310427666 MULTI CID FTMS 0 0 0 6001 411020.34375 0.8977886904428735 4 -0.1052837371826171 2 Unmodified _QSISNENE_ REV__ENSG00000061794|ENST00000081029|MRPS35 22.736283301280096 0.5659792798204337 4 {[QS]|[NT]}{I|L}GP 5 -1 39.564 0.0 0.0 4.3033 0.0 0.0 0.0 434.11618982486567 434.11618982486567 33.878041644171894 0.0 0.0 0.0 0 0.8807196863200843 1.154901959985743 0.0 0.0 {[QS]|[NT]}{I|L}GP 4.3033 - 49 + 1 2.504 45345.9 1.0 1817 4184 6001 HBL1_DMSO_200M_050219_2,6003 HBL1_DMSO_200M_050219_2,6003,QSISNENE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6004 31.298 423.0 207130.0 25 0 16059.0 + 36541 TAKGGDISV 9 123 424.22957966959285 846.4446064059857 2 424.2297241091728 MULTI CID FTMS 0 0 0 6001 141339.015625 0.2233320369798492 -9 0.3066272735595703 3 Unmodified _TAKGGDISV_ ENSG00000126267|ENST00000649813|COX6B1 36.12702656103203 0.0967173616627612 4 [VS]Q{[QS]|[NT]}{I|L}SV 8 6 + 36.053 0.0 0.0 4.2594 4.2594 76.044 0.0 0.0 0.0 8.222281142179213 10.897803053245951 8.222281142179213 7.258950235313858 0 1.274227503252014 1.3979400086720375 0.6989700043360187 0.0 [VS]Q{[QS]|[NT]}{I|L}SV;[VS][NG][TA]{I|L}SV;{[DA]|[EG]}K{[QS]|[NT]}{I|L}SV;{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}{I|L}SV;[VS][AG]{[QS]|[NT]}{I|L}SV;{[QN]|[E{I|L}]|[KN]}[TA]D{I|L}SV;[VS][NG]{I|L}[TA]SV;[TA]{[QG]|[NA]}[TA]{I|L}SV;[VS]Q[VG][TA]SV;[TA]AA{[QS]|[NT]}{I|L}SV 4.2594;3.4018;3.2653;3.2604;3.1651;2.7873;2.6333;2.5553;2.3966;2.3186 -;-;-;-;-;-;-;-;-;- 479 1 2.504 71547.1 1.0 1818 4184 6001 HBL1_DMSO_200M_050219_2,6004 HBL1_DMSO_200M_050219_2,6004,TAKGGDISV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6005 31.304 326.0 402350.0 25 0 82528.0 + 38719 TTVPTVHHV 9 123 330.85067182080354 989.5301860626108 3 330.8500244021416 MULTI CID FTMS 0 0 0 6001 125788.9609375 0.6247551866440652 4 -0.1052837371826171 4 Unmodified _TTVPTVHHV_ ENSG00000196678|ENST00000357967|ERI2;ENST00000568805.5_1_16:20809048-20811281:-|nuORF;nc|ENSG00000196678|A8K979-2|ERI2 23.1484247019978 0.2366544122328345 4 PTVHHV 6 3 17.202 0.0 0.0 1.7384 0.0 0.0 301.16372258179007 0.0 301.16372258179007 0.0 7.113227156620553 0.0 0.0 0 0.0 0.0 0.0 0.0 + PTVHHV 1.7384 + + 77 + 1 2.504 106535.9 1.0 1819 4184 6001 HBL1_DMSO_200M_050219_2,6005 HBL1_DMSO_200M_050219_2,6005,TTVPTVHHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6007 31.309 41.0 1499900.0 25 0 161300.0 + 44715 YPHDPPKV 8 85 476.7481369075522 951.4817208819044 2 476.7480956912041 MULTI CID FTMS 0 0 0 6006 1346282.5 0.7375725450487067 4 -0.0777130126953125 1 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 62.57269311338072 0.1158273023829763 4 YPHDPPKV 8 0 + 77.025 0.0 0.0 8.0952 8.0952 95.055 0.0 0.0 0.0 41.88670047696206 14.936237904918173 14.936237904918173 16.173362959118407 0 2.075257498915996 1.2218487496163564 0.0 0.0 + + YPHDPPKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HDPPKV;YPWYPKV;[HD]PYPPKV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YDPPKV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DYPPKV;YWYPPKV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WYPKV;[WY]YPPKV;[HD]PPYPKV 8.0952;6.3954;5.5045;5.2413;5.004;4.9249;4.5294;4.2484;4.2003;3.847 +;+;-;-;-;-;-;-;-;- + 217 + 1 2.504 51324.1 1.0 1820 4185 6006 HBL1_DMSO_200M_050219_2,6007 HBL1_DMSO_200M_050219_2,6007,YPHDPPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6008 31.314 277.0 193780.0 25 0 36423.0 + 24925 MPPKAGQTI 9 78 471.7566710214138 941.4987891096276 2 471.7576171755791 MULTI CID FTMS 0 0 0 6006 165646.671875 0.5942521474359693 -29 0.9269847869873048 2 Unmodified _MPPKAGQTI_ ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB;nc|ENSG00000170322|Q6P4R8-3|NFRKB 24.020572477871973 0.2255576514309169 4 MPP 3 6 48.188 0.0 0.0 5.1182 0.0 0.0 0.0 613.3356417291624 613.3356417291624 29.19129307741976 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + MPP 5.1182 + + 98 + 1 2.504 45980.6 1.0 1821 4185 6006 HBL1_DMSO_200M_050219_2,6008 HBL1_DMSO_200M_050219_2,6008,MPPKAGQTI False True MPPKAGQTI 31.313766 471.757617175579 28874170.0 6006.0 nc|ENSG00000170322|Q6P4R8-3|NFRKB;;ENSG00000170322|ENST00000682444|NFRKB;;nc|ENSG00000170322|Q6P4R8-2|NFRKB 5.268325328826904 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6010 31.324 410.0 190370.0 25 0 10977.0 + 7382 EGGARRICAH 10 118 535.2675157962208 1068.5204786592417 2 535.2674438357353 MULTI CID FTMS 0 0 0 6009 128932.7109375 0.0668436931945214 11 -0.305023193359375 1 Unmodified _EGGARRICAH_ REV__ENSG00000235711|ENST00000421388|ANKRD34C 13.90604991867851 0.6142120002215601 4 [EP]QDTR[NP]{I|L} 9 -1 + 28.663 0.0 0.0 2.6824 2.6824 71.694 0.0 0.0 0.0 5.986446888048111 2.676062401770313 2.676062401770313 7.1600334363479945 0 0.0 0.0 0.5 0.6549471895720984 [EP]QDTR[NP]{I|L};[EP]QDTR[QP]V;[EP][AG]DTR[NP]{I|L};{[SA]|[TG]}[{I|L}A][VG]TDQ[HA];[EP]QDKW{I|L}[PG];{[DA]|[EG]}GRR{[WT]|[RM]}[HA];[EP]QDTRVA[PG];[EP]QDK[HK]{[MG]|[TS]};[AG][{I|L}T][VG]TDQ[HA];[EP][AG]DTR[QP]V 2.6824;2.0124;1.8207;1.4721;1.448;1.4391;1.4278;1.417;1.3652;1.1506 -;-;-;-;-;-;-;-;-;- 582 + 1 2.504 64895.7 1.0 1822 4186 6009 HBL1_DMSO_200M_050219_2,6010 HBL1_DMSO_200M_050219_2,6010,EGGARRICAH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6011 31.331 416.0 169420.0 25 0 16306.0 + 4857 DGAPPPNQI 9 123 454.7266376347831 907.4387223363664 2 454.7271911501884 MULTI CID FTMS 0 0 0 6009 177775.21875 0.1663473628559966 -27 0.867950439453125 2 Unmodified _DGAPPPNQI_ ENSG00000184007|ENST00000647444|PTP4A2;ENST00000532001.6_1_1:32374455-32378590:-|nuORF;nc|ENSG00000184007|Q12974-3|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2 34.93206674587334 0.1032771302489716 4 [DG]APP 5 4 47.561 0.0 0.0 5.2412 0.0 0.0 0.0 467.2250742252913 467.2250742252913 34.79656558957376 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.1803115997617927 0.0 + [DG]APP 5.2412 + + 227 1 2.504 56823.2 1.0 1823 4186 6009 HBL1_DMSO_200M_050219_2,6011 HBL1_DMSO_200M_050219_2,6011,DGAPPPNQI True True DGAPPPNQI 31.330921 454.727191150188 39711078.0 6009.0 ENSG00000184007|ENST00000647444|PTP4A2;;ENST00000532001.6_1_1:32374455-32378590:-|nuORF;;nc|ENSG00000184007|Q12974-4|PTP4A2;;nc|ENSG00000184007|Q12974-3|PTP4A2 5.618362585703532 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6012 31.342 638.0 241520.0 25 0 17579.0 + 24821 MPKKDPVKI 9 133 352.54792044354053 1054.6219319308216 3 352.5473815798759 MULTI CID FTMS 0 0 0 6009 125516.3671875 0.264559095262645 -10 0.3233966827392578 3 Unmodified _MPKKDPVKI_ ENSG00000101898|ENST00000394552|MCTS2;ENSG00000232119|ENST00000371317|MCTS1;ENST00000479096.1_1_20:30135258-30136578:+|nuORF;ENST00000487133.1_1_X:119739298-119742228:+|nuORF;nc|ENSG00000232119|Q9ULC4-2|MCTS1;nc|ENSG00000232119|Q9ULC4-3|MCTS1 23.78978130925829 0.2284941198415988 4 MPKKD[VP]{I|L}K 9 2 + 44.572 0.0 0.0 4.2263 4.2263 71.478 0.0 0.0 0.0 13.177913006781672 3.54874320879685 3.54874320879685 3.54874320879685 0 0.5 0.0 0.0 0.3530722587452721 MPKKD[VP]{I|L}K;MPKKD[VP]K{I|L};[YV]KPV[KP]QP;[YV]K[{I|L}T][R{I|L}]Y;[VP]KDKK{[QV]|[N{I|L}]|[RA]|[KV]}N;[YV]K[{I|L}T][YR]{I|L};[YV]KPK[VP]QP;[VP]K[SG]VK{[QV]|[N{I|L}]|[RA]|[KV]}N;[YV]PKV[KP]QP;[YV]KPV[KP][AG]P 4.2263;3.8898;1.7672;1.6191;1.4893;1.4879;1.4818;1.2626;1.0294;0.89408 -;+;-;-;-;-;-;-;-;- + 383 + 1 2.504 128185.0 1.0 1824 4186 6009 HBL1_DMSO_200M_050219_2,6012 HBL1_DMSO_200M_050219_2,6012,MPKKDPVKI False True MPKKDPVKI 31.342027 352.547381579876 3796054.75 6009.0 nc|ENSG00000232119|Q9ULC4-2|MCTS1;;ENSG00000101898|ENST00000394552|MCTS2;;ENSG00000232119|ENST00000371317|MCTS1;;nc|ENSG00000232119|Q9ULC4-3|MCTS1;;ENST00000479096.1_1_20:30135258-30136578:+|nuORF;;ENST00000487133.1_1_X:119739298-119742228:+|nuORF 4.265734036763509 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6014 31.36 800.0 93994.0 25 0 4365.2 43736 YDPEEHGSI 9 124 523.7231251568601 1045.43169738052 2 523.7237426638603 MULTI CID FTMS 0 0 0 6013 43716.3046875 0.4323112648338147 2 -0.0395431518554687 1 Unmodified _YDPEEHGSI_ ENSG00000079819|ENST00000337057|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2 16.942295170755138 0.3780752226737986 4 [Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]}TCCC{I|L} 9 6 + 42.525 0.0 0.0 4.0677 4.0677 70.604 0.0 0.0 0.0 12.198399377055 26.09826504823915 12.198399377055 3.36561841718499 0 0.3807196863200844 1.6989700043360187 0.9386218330464624 0.0 [Y{I|L}]{NN|[MP]|[D{I|L}]|[EV]}TCCC{I|L};[Y{I|L}]{[QN]|[E{I|L}]|[KN]}SCCC{I|L};[QA]RMTSS{[YC]|[HE]};[AG]ARMTSS{[YC]|[HE]};{[{M(Oxidation (M))|F}H]|[RQ]}[HT][YN]D{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[WT]|[RM]}{NN|[MP]|[D{I|L}]|[EV]}D{I|L} 4.0677;3.7458;1.9066;1.6774;1.0677;0.23078 -;-;-;-;-;- 421 1 2.516 62684.1 0.4799999892711639 1825 4187 6013 HBL1_DMSO_200M_050219_2,6014 HBL1_DMSO_200M_050219_2,6014,YDPEEHGSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6015 31.364 220.0 436630.0 25 0 58550.0 + 2860 AVDKSRTED 9 100 340.8370026994652 1019.4891786985957 3 340.8367797732353 MULTI CID FTMS 0 0 0 6013 251487.65625 0.7843346224614716 -6 0.1539745330810547 2 Unmodified _AVDKSRTED_ REV__ENSG00000185860|ENST00000367912|CCDC190;REV__nc|ENSG00000185860|Q86UF4|CCDC190 6.723162845929126 0.6799819581413107 4 DG{I|L}K{I|L} 5 -1 27.408 0.0 0.0 2.6884 0.0 0.0 0.0 490.15427576236567 490.15427576236567 20.32924130362474 0.0 0.0 0.0 0 0.0796896906561032 1.154901959985743 0.0 0.0 DG{I|L}K{I|L} 2.6884 - 65 + 1 2.516 83314.1 1.0 1826 4187 6013 HBL1_DMSO_200M_050219_2,6015 HBL1_DMSO_200M_050219_2,6015,AVDKSRTED False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6016 31.378 800.0 272870.0 25 0 80695.0 + 41425 VPLFRKSLCV 10 125 387.8999839028438 1160.6781223087314 3 387.8995544314384 MULTI CID FTMS 0 0 0 6013 77137.7265625 0.2504603275618585 -10 0.3100624084472656 3 Unmodified _VPLFRKSLCV_ ENST00000308595.9_1_11:67053337-67053520:+|nuORF 13.51866281300042 0.6207119795985845 4 VP{I|L} 3 7 40.301 0.0 0.0 3.4722 0.0 0.0 0.0 848.4502763005203 848.4502763005203 28.70693527921365 0.0 0.0 0.0 0 0.5242275032520141 0.8860566476931632 0.0 0.0 + VP{I|L} 3.4722 + + 31 + 1 2.516 178705.5 0.959999978542328 1827 4187 6013 HBL1_DMSO_200M_050219_2,6016 HBL1_DMSO_200M_050219_2,6016,VPLFRKSLCV False False VPLFRKSLCV 31.377722 387.899554431438 2510585.25 6013.0 ENST00000308595.9_1_11:67053337-67053520:+|nuORF 4.483529756466548 3.0 True 10.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6019 31.391 407.0 249600.0 25 0 30535.0 -1 DLGKHYKC 8 92 510.75129316690936 1019.4880334006187 2 510.7516967654228 MULTI CID FTMS 0 0 0 6018 219484.453125 0.982056827700998 -3 0.0679607391357421 1 Carbamidomethyl (C) _DLGKHYKC(Carbamidomethyl (C))_ ENST00000532317.5_1_11:85669287-85669476:-|nuORF 23.1484247019978 0.5573009939494978 4 D{I|L}GK{I|L} 5 -1 44.949 0.0 0.0 4.4089 0.0 0.0 0.0 490.15497766666255 490.15497766666255 37.95880017344075 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 D{I|L}GK{I|L} 4.4089 - 224 + 1 2.516 82544.9 1.0 1828 4189 6018 HBL1_DMSO_200M_050219_2,6019 HBL1_DMSO_200M_050219_2,6019,DLGKHYKC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6020 31.405 800.0 224090.0 25 0 10753.0 + 3653 DAEMTTRMV 9 181 535.2355215928542 1068.4564902525085 2 535.2364379763603 MULTI CID FTMS 0 0 0 6018 166072.40625 0.0883850039320165 -8 0.1935176849365234 2 Oxidation (M) _DAEM(Oxidation (M))TTRMV_ ENSG00000205220|ENST00000358514|PSMB10 66.45667989310934 0.0225072657982126 4 {[DA]|[EG]}E{M(Oxidation (M))|F}TTRMV 9 0 + 73.814 0.0 0.0 6.9085 6.9085 91.658 0.0 0.0 0.0 52.25949072601743 6.935749724493121 6.935749724493121 13.762874945799766 0 1.1989700043360187 2.0 1.055462187404089 0.0 + + {[DA]|[EG]}E{M(Oxidation (M))|F}TTRMV;{[DA]|[EG]}{M(Oxidation (M))|F}ETTRMV;EEG{M(Oxidation (M))|F}TTRMV;{[DA]|[EG]}E[YR]{[DA]|[EG]}VM;WEMA{M(Oxidation (M))|F}RMV;{[DA]|[EG]}E[YR][{I|L}A][EC];WE{M(Oxidation (M))|F}[YT]NP{I|L};{[DA]|[EG]}E[YG]{[RE]|[WV]}VM;[{M(Oxidation (M))|F}T]RTTEEW;{[DA]|[EG]}E[YR]{[ET]|[MV]}W 6.9085;5.6204;4.7048;3.5073;3.3284;3.2315;3.1787;3.1307;3.1257;3.1171 +;-;-;-;-;-;-;-;-;- + 1785 + 1 2.516 136348.6 0.7599999904632568 1829 4189 6018 HBL1_DMSO_200M_050219_2,6020 HBL1_DMSO_200M_050219_2,6020,DAEMTTRMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6022 31.41 18.0 3949000.0 25 0 678260.0 + 44718 YPHDPPKV 8 86 318.16810558323687 951.4824873499106 3 318.1676818728447 MULTI CID FTMS 0 0 0 6021 2628683.5 0.449697717650434 7 -0.2133922576904297 1 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 18.1463463914782 0.6428359029697936 4 YPHDPPKV 8 0 + 49.347 0.0 0.0 5.1864 5.1864 80.603 0.0 0.0 0.0 14.465175419594658 7.95880017344075 7.95880017344075 8.372727025023003 0 0.3252574989159953 0.0 0.0 0.0 + + YPHDPPKV;YPHDPV[KP];YPHDVP[KP];YWYPPKV;YPWYPKV;YWYPV[KP];YPWYV[KP];YWYVP[KP];YPRR{[{M(Oxidation (M))|F}D]|MM}V 5.1864;4.3064;3.99;2.9302;2.8511;2.0502;1.9711;1.7338;0.71693 +;-;-;-;-;-;-;-;- + 135 + 1 2.516 63075.6 1.0 1830 4190 6021 HBL1_DMSO_200M_050219_2,6022 HBL1_DMSO_200M_050219_2,6022,YPHDPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6023 31.424 800.0 190850.0 25 0 12797.0 + 13236 HHPDYNNEL 9 144 380.1688936141271 1137.4848514425812 3 380.1686584353447 MULTI CID FTMS 0 0 0 6021 126273.4296875 0.7132852261113866 -3 0.0632133483886718 2 Unmodified _HHPDYNNEL_ ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11 25.399314129420983 0.2080152500878129 4 HH[DP]YNNE{I|L} 9 0 + 38.362 0.0 0.0 3.3726 3.3726 76.47 0.0 0.0 0.0 10.737862141609192 6.751736484954385 6.751736484954385 9.208187539523756 0 0.1989700043360188 1.0 0.0 0.5 + + HH[DP]YNNE{I|L};HH[DP]YNGGE{I|L};HH[DP]YGGNE{I|L};[WH]YYNNE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NNY[HC]D{I|L};[DP]HHYNNE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}YNNE{I|L};[WH]YYNGGE{I|L};[WH]YYGGNE{I|L};[QP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YNNE{I|L} 3.3726;2.563;2.563;2.4286;2.1391;1.9641;1.8093;1.6143;1.6143;1.5466 +;-;-;-;-;-;-;-;-;- + 386 1 2.516 123324.0 0.5799999833106995 1831 4190 6021 HBL1_DMSO_200M_050219_2,6023 HBL1_DMSO_200M_050219_2,6023,HHPDYNNEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6024 31.438 800.0 150540.0 25 0 14060.0 + 36980 TFIGHSKAV 9 139 480.2693935782453 958.5242342232906 2 480.2697021365166 MULTI CID FTMS 0 0 0 6021 104350.1796875 0.9677610377445572 -4 0.0916309356689453 3 Unmodified _TFIGHSKAV_ ENSG00000168438|ENST00000307731|CDC40;ENST00000606893.5_1_6:110533295-110551331:+|nuORF 40.72490554402381 0.0714771638475563 4 T{M(Oxidation (M))|F}{I|L}GHSKAV 9 0 + 56.117 0.0 0.0 5.8545 5.8545 80.24 0.0 0.0 0.0 14.973024840566469 4.973246408079497 4.973246408079497 4.973246408079497 0 0.5484550065040282 0.0 0.7302046884880937 0.0 + + T{M(Oxidation (M))|F}{I|L}GHSKAV;T{M(Oxidation (M))|F}{I|L}GHSKG{I|L} 5.8545;5.3357 +;- + 410 + 1 2.516 96248.6 0.5099999904632568 1832 4190 6021 HBL1_DMSO_200M_050219_2,6024 HBL1_DMSO_200M_050219_2,6024,TFIGHSKAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6025 31.452 800.0 88294.0 25 0 8916.2 + -1 CAEASEDRPF 10 81 591.2474219697533 1180.4802910063063 2 591.2474853396416 MULTI CID FTMS 0 0 0 6021 99553.53125 0.8551198842612026 7 -0.2133922576904297 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))AEASEDRPF_ REV__ENSG00000171487|ENST00000390649|NLRP5 5.731851221503515 0.7001233259664787 4 Y 1 -1 13.495 0.0 0.0 1.1432 0.0 0.0 999.4062228684144 0.0 999.4062228684144 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1432 - 78 + 1 2.516 59869.1 0.4900000095367431 1833 4190 6021 HBL1_DMSO_200M_050219_2,6025 HBL1_DMSO_200M_050219_2,6025,CAEASEDRPF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6026 31.463 660.0 319070.0 25 0 32471.0 + 36981 TFIGHSKAV 9 188 320.5149090640504 958.5228977923512 3 320.5149108767509 MULTI CID FTMS 0 0 0 6021 81524.1328125 0.6630056908085512 -3 0.0632133483886718 5 Unmodified _TFIGHSKAV_ ENSG00000168438|ENST00000307731|CDC40;ENST00000606893.5_1_6:110533295-110551331:+|nuORF 26.020703789607367 0.2001090068861241 4 [{M(Oxidation (M))|F}T]{I|L}GH[KS]AV 9 0 + 28.43 0.0 0.0 2.966 2.966 62.413 0.0 0.0 0.0 3.904784322338571 0.6923858641019862 0.6923858641019862 0.6923858641019862 0 0.2134679910804404 0.0 0.5994850021680094 0.0 + + [{M(Oxidation (M))|F}T]{I|L}GH[KS]AV;[{M(Oxidation (M))|F}T]{I|L}GHR[KT];[{M(Oxidation (M))|F}T]VAH[KS]AV;[{M(Oxidation (M))|F}T]VAHR[KT];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TH{I|L}VET;[{M(Oxidation (M))|F}T]{I|L}GH[KS]G{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HT]V{I|L}ET;[{M(Oxidation (M))|F}T]{I|L}GH[VG][KT];[{M(Oxidation (M))|F}T]VAH[KS]G{I|L};[{M(Oxidation (M))|F}T]VAH[VG][KT] 2.966;2.8938;2.8356;2.7633;2.1465;2.0099;1.945;1.9275;1.8795;1.797 +;-;-;-;-;-;-;-;-;- + 213 + 1 2.516 169905.5 1.0 1834 4190 6021 HBL1_DMSO_200M_050219_2,6026 HBL1_DMSO_200M_050219_2,6026,TFIGHSKAV False True TFIGHSKAV 31.462997 320.514910876751 1717336.5 6021.0 ENSG00000168438|ENST00000307731|CDC40;;ENST00000606893.5_1_6:110533295-110551331:+|nuORF 7.342995166778564 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6028 31.468 14.0 3270000.0 25 0 314990.0 + 13234 HHPDYNNEL 9 70 569.7490046105385 1137.4834562878768 2 569.7496215701103 MULTI CID FTMS 0 0 0 6027 3880538.0 0.9502168850944251 -3 0.0853519439697265 1 Unmodified _HHPDYNNEL_ ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11 25.399314129420983 0.2080152500878129 4 HH[DP]YNNE{I|L} 9 0 + 42.214 0.0 0.0 3.7111 3.7111 76.757 0.0 0.0 0.0 14.533000792149036 8.969975784476162 8.969975784476162 9.208187539523747 0 0.1822333069283654 1.3010299956639813 0.0 0.4247425010840047 + + HH[DP]YNNE{I|L};HH[DP]YGGNE{I|L};HH[DP]YNGGE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NNY[HC]D{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}YNNE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGNY[HC]D{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NGGY[HC]D{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HD]YNNE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}YGGNE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}YNGGE{I|L} 3.7111;2.9016;2.9016;2.4335;2.3066;1.624;1.624;1.6186;1.4971;1.4971 +;-;-;-;-;-;-;-;-;- + 168 1 2.52 42856.1 1.0 1835 4191 6027 HBL1_DMSO_200M_050219_2,6028 HBL1_DMSO_200M_050219_2,6028,HHPDYNNEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6029 31.469 23.0 2741800.0 25 0 343310.0 + 15502 IPTLTHVL 8 82 447.2761269222121 892.5377009112242 2 447.2764160037041 MULTI CID FTMS 0 0 0 6027 2612336.75 0.7097440774608076 8 -0.2309989929199218 2 Unmodified _IPTLTHVL_ REV__ENST00000482692.1_1_7:28449401-28450235:+|nuORF 19.438996006549623 0.6237395211498085 4 {I|L}PP 3 -1 50.445 0.0 0.0 5.6519 0.0 0.0 0.0 582.3270342213316 582.3270342213316 40.26425173045176 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PP 5.6519 - 90 + 1 2.52 52211.7 1.0 1836 4191 6027 HBL1_DMSO_200M_050219_2,6029 HBL1_DMSO_200M_050219_2,6029,IPTLTHVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6030 31.47 60.0 1155800.0 25 0 116070.0 3536 CVPFRTTK 8 85 476.256952162498 950.499351391796 2 476.2577087283134 MULTI CID FTMS 0 0 0 6027 564110.5625 0.0743330035782218 -21 0.6376838684082031 3 Unmodified _CVPFRTTK_ ENSG00000139618|ENST00000380152|BRCA2 12.531546534597751 0.7257836412119636 4 {[DS]|[MA]|[CV]|TT}PPDV 6 5 43.007 0.0 0.0 4.5247 0.0 0.0 0.0 337.1875094049438 337.1875094049438 26.607281392838825 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 {[DS]|[MA]|[CV]|TT}PPDV 4.5247 - 143 + 1 2.52 57571.5 1.0 1837 4191 6027 HBL1_DMSO_200M_050219_2,6030 HBL1_DMSO_200M_050219_2,6030,CVPFRTTK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6031 31.473 114.0 639370.0 25 0 106840.0 1996 APAKPGGA 8 85 334.6900910434866 667.3656291537732 2 334.6898071169853 MULTI CID FTMS 0 0 0 6027 493414.4375 0.0546477331766825 -9 0.2567729949951172 4 Unmodified _APAKPGGA_ ENSG00000139842|ENST00000375440|CUL4A;ENST00000474116.5_1_13:113863941-113874010:+|nuORF;ENST00000494985.5_1_13:113863983-113873323:+|nuORF 2.577480529830294 0.808687252328423 4 A{I|L}NHT{I|L} 6 7 + 69.351 0.0 0.0 10.392 10.392 97.182 0.0 0.0 0.0 33.64446203934554 12.210857334502023 12.210857334502023 16.72212741510407 0 0.7134679910804405 2.0 0.6989700043360187 0.7302046884880937 A{I|L}NHT{I|L};A{I|L}GGHT{I|L} 10.392;7.886 -;- 75 + 1 2.52 66886.8 1.0 1838 4191 6027 HBL1_DMSO_200M_050219_2,6031 HBL1_DMSO_200M_050219_2,6031,APAKPGGA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6032 31.478 269.0 181100.0 25 0 23763.0 + 16745 KFIEKAQNM 9 87 554.7948100076565 1107.5750670821128 2 554.7954589724541 MULTI CID FTMS 0 0 0 6027 233010.765625 0.4958612527805285 5 -0.1259708404541015 5 Unmodified _KFIEKAQNM_ ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1 33.4449034751529 0.1114409586740657 4 K{M(Oxidation (M))|F}{I|L}E 4 5 42.537 0.0 0.0 3.8406 0.0 0.0 0.0 587.2626436822874 587.2626436822874 21.96440244762421 0.0 0.0 0.0 0 1.360924374808178 0.0 0.0 0.0 + K{M(Oxidation (M))|F}{I|L}E 3.8406 + + 173 + 1 2.52 48076.3 1.0 1839 4191 6027 HBL1_DMSO_200M_050219_2,6032 HBL1_DMSO_200M_050219_2,6032,KFIEKAQNM True True KFIEKAQNM 31.477813 554.795458972454 6069123.0 6027.0 nc|ENSG00000198522|Q9HCN4-3|GPN1;;ENSG00000198522|ENST00000610189|GPN1;;nc|ENSG00000198522|Q9HCN4-2|GPN1;;nc|ENSG00000198522|Q9HCN4-4|GPN1;;nc|ENSG00000198522|Q9HCN4-5|GPN1 6.212681611378987 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6034 31.489 500.0 163440.0 25 0 16965.0 + + 41217 VPESSGRYV 9 91 497.2539101224504 992.4932673117008 2 497.2539550662041 MULTI CID FTMS 0 0 0 6033 100582.765625 0.0730179639724186 23 -0.7453575134277344 1 Unmodified _VPEYIELM_ ENSG00000132017|ENST00000254337|DCAF15;ENST00000588523.1_1_19:14071181-14071804:+|nuORF 32.116972079565 0.368454113111938 4 VPESS 5 -1 63.293 0.0 0.0 6.3772 0.0 0.0 0.0 490.24216638736567 490.24216638736567 35.845806876763326 0.0 0.0 0.0 0 0.805462187404089 1.3010299956639813 0.8494850021680094 0.0 VPESS 6.3772 - 306 + 1 2.52 68435.2 1.0 1840 4192 6033 HBL1_DMSO_200M_050219_2,6034 HBL1_DMSO_200M_050219_2,6034,VPEYIELM False False VPESSGRYV 31.489163 497.253955066204 88978760.0 6033.0 ENSG00000132017|ENST00000254337|DCAF15;;ENST00000588523.1_1_19:14071181-14071804:+|nuORF 6.529537200927734 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6035 31.496 388.0 316410.0 25 0 36130.0 + 33267 SFPASSGVSH 10 122 488.23034326897925 974.4461336047584 2 488.2322265505791 MULTI CID FTMS 0 0 0 6033 93938.390625 0.1274903861454635 83 -3.0640182495117188 2 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 29.081581746732265 0.3152867722954398 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H 8 5 + 51.432 0.0 0.0 5.2781 5.2781 79.708 0.0 0.0 0.0 34.97810928665125 6.699243915188191 6.699243915188191 6.704328361272971 0 0.3807196863200844 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PA[VS][SG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PA{[CA]|SS}[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[SG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{NN|[MP]|[D{I|L}]|[EV]}H;[PA]SM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[YC]|[HE]}V;{[QN]|[E{I|L}]|[KN]}[VG]{[CA]|SS}APDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PA]{[CP]|[EA]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CP]|[EA]}[PA] 5.2781;4.59;4.4618;3.529;2.903;2.8062;2.594;1.3595;1.3148;1.2958 -;-;+;-;-;-;-;-;-;- + 345 + 1 2.52 96087.9 1.0 1841 4192 6033 HBL1_DMSO_200M_050219_2,6035 HBL1_DMSO_200M_050219_2,6035,SFPASSGVSH False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6036 31.508 689.0 154000.0 25 0 23780.0 + 21135 LPAPPTQNM 9 129 492.7439910645884 983.4734291959768 2 492.7451660037041 MULTI CID FTMS 0 0 0 6033 86787.921875 0.2360438037102859 -15 0.4458255767822265 3 Oxidation (M) _LPAPPTQNM(Oxidation (M))_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 57.47134341890925 0.0274820932774257 4 [{I|L}P]AP[TP]QN{M(Oxidation (M))|F} 9 0 + 31.805 0.0 0.0 3.2339 3.2339 71.306 0.0 0.0 0.0 2.780827726706012 6.086127766899029 2.780827726706012 5.751349721325948 0 1.274227503252014 1.3979400086720375 0.3252574989159953 0.0 + + [{I|L}P]AP[TP]QN{M(Oxidation (M))|F};[{I|L}P]A[Y{M(Oxidation (M))|F}]{I|L}N{M(Oxidation (M))|F};[PA]{I|L}P[TP]QN{M(Oxidation (M))|F};[{I|L}P]AP[TP][AG]N{M(Oxidation (M))|F};[PA]{I|L}[Y{M(Oxidation (M))|F}]{I|L}N{M(Oxidation (M))|F};[PA]{I|L}P[TP][AG]N{M(Oxidation (M))|F};[PA]P{I|L}[TP]QN{M(Oxidation (M))|F};{[QS]|[NT]}K[{M(Oxidation (M))|F}T]{I|L}N{M(Oxidation (M))|F};[PA]PSA[PA]{I|L}N{M(Oxidation (M))|F};[PA]P{I|L}[TP][AG]N{M(Oxidation (M))|F} 3.2339;2.6491;2.3961;2.2976;1.8113;1.4599;1.4353;1.2984;0.66692;0.49898 +;-;-;-;-;-;-;-;-;- + 370 1 2.52 85160.5 1.0 1842 4192 6033 HBL1_DMSO_200M_050219_2,6036 HBL1_DMSO_200M_050219_2,6036,LPAPPTQNM True False LPAPPTQNM 31.508076 492.745166003704 10525842.0 6033.0 ENSG00000184402|ENST00000331758|SS18L1;;ENSG00000141380|ENST00000415083|SS18;;nc|ENSG00000184402|O75177-5|SS18L1;;nc|ENSG00000184402|O75177-2|SS18L1;;nc|ENSG00000141380|Q15532-2|SS18 6.5673801104227705 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6038 31.513 39.0 1479800.0 25 0 158560.0 + 24943 MPPPPPQGV 9 82 468.236188042907 934.457823152614 2 468.2364074587822 MULTI CID FTMS 0 0 0 6037 1242818.75 0.7160095914916668 -4 0.1264858245849609 1 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 5 4 21.254 0.0 0.0 2.2745 0.0 0.0 0.0 396.1883091061972 396.1883091061972 5.390821784153344 0.0 0.0 0.0 0 0.5796896906561032 0.0 0.5 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 2.2745 + + 123 1 2.52 50315.9 1.0 1843 4193 6037 HBL1_DMSO_200M_050219_2,6038 HBL1_DMSO_200M_050219_2,6038,MPPPPPQGV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6039 31.518 270.0 202310.0 25 0 23543.0 + 4317 DARPSVNAV 9 85 464.74607015314143 927.4775873730828 2 464.7461120486259 MULTI CID FTMS 0 0 0 6037 300533.53125 0.1556901845506388 11 -0.4036865234375 2 Unmodified _DARPSVNAV_ ENSG00000087053|ENST00000346299|MTMR2;ENSG00000171100|ENST00000370396|MTM1;nc|ENSG00000087053|Q13614-2|MTMR2;nc|ENSG00000171100|Q13496-2|MTM1 31.26834338654808 0.1333407332142048 4 {[DA]|[EG]}R[PS]VNAV 9 0 + 59.575 0.0 0.0 6.4233 6.4233 87.289 0.0 0.0 0.0 11.25955625825256 35.050310955212964 11.25955625825256 9.208187539523747 0 0.9247425010840048 1.3979400086720375 0.3494850021680094 0.0 + + {[DA]|[EG]}R[PS]VNAV;{[DA]|[EG]}R[PS]VGGAV;[PS]{[NV]|[RG]}EVNAV;[VG]W[PS]VNAV;[PS]{[NV]|[RG]}EVGGAV;[PS]{[NV]|[RG]}D{I|L}NAV;[VG]W[PS]VGGAV;[PS]{[NV]|[RG]}D{I|L}GGAV;[PS]{[NV]|[RG]}R{[DA]|[EG]}AV;[PS]{[NV]|[RG]}[VG]WAV 6.4233;5.4305;4.9279;4.487;3.9351;3.7121;3.4942;2.7193;1.8803;1.8803 +;-;-;-;-;-;-;-;-;- + 337 1 2.52 45352.6 1.0 1844 4193 6037 HBL1_DMSO_200M_050219_2,6039 HBL1_DMSO_200M_050219_2,6039,DARPSVNAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6040 31.52 79.0 762410.0 25 0 65499.0 + 624 AEKVTTHA 8 102 428.7298647263455 855.4451765194909 2 428.7297546267509 MULTI CID FTMS 0 0 0 6037 442708.9375 0.6350966671098888 7 -0.1947879791259765 3 Unmodified _AEKVTTHA_ REV__ENSG00000137776|ENST00000380516|SLTM;REV__ENST00000480144.5_1_15:59191618-59225764:-|nuORF 18.13498045792455 0.6430038125133779 4 QQAPQAT{I|L} 8 -1 QQAPQA + + 14.693 -0.2287 -0.036692 1.7176 1.7176 44.416 0.0 0.0 0.0 0.0 8.037275116073342 0.0 0.0 0 0.0 0.0 0.0 0.0 QQAPQAT{I|L} 1.7176 - 54 + 1 2.52 51513.0 1.0 1845 4193 6037 HBL1_DMSO_200M_050219_2,6040 HBL1_DMSO_200M_050219_2,6040,AEKVTTHA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6041 31.533 800.0 197390.0 25 0 29795.0 -1 LYFDGNMA 8 124 473.7006235092593 945.3866940853186 2 473.7010070681572 MULTI CID FTMS 0 0 0 6037 277445.40625 1.0 0 0.0 4 Oxidation (M) _LYFDGNM(Oxidation (M))A_ ENST00000434735.6_1_12:109973723-109974035:+|nuORF 10.823927491677226 0.7510103885582552 4 {I|L}D 2 -1 22.959 0.0 0.0 2.4285 0.0 0.0 0.0 714.2531246571352 714.2531246571352 8.866231628152688 0.0 0.0 0.0 0 0.1989700043360188 0.0 0.0 0.0 {I|L}D 2.4285 - 325 + 1 2.52 123436.8 0.8899999856948853 1846 4193 6037 HBL1_DMSO_200M_050219_2,6041 HBL1_DMSO_200M_050219_2,6041,LYFDGNMA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6043 31.539 151.0 359710.0 25 0 40324.0 + 12041 GQDINPQRV 9 72 513.7697881996942 1025.5250234661885 2 513.7703124880791 MULTI CID FTMS 0 0 0 6042 427856.9375 1.0 0 0.0 1 Unmodified _GQDINPQRV_ ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;ENST00000557366.5_1_14:68270819-68282710:-|nuORF;ENST00000557407.1_1_14:68264347-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-4|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 41.8396318013385 0.0653578398400075 4 {[QG]|[NA]}VT{I|L}N{I|L}D 8 6 56.419 0.0 0.0 5.5015 0.0 0.0 0.0 182.0553725429264 182.0553725429264 45.13759790242446 0.0 0.0 0.0 0 0.8182503180159344 0.8538719643217619 0.0 1.7302046884880935 {[QG]|[NA]}VT{I|L}N{I|L}D 5.5015 - 217 1 2.52 45846.4 1.0 1847 4194 6042 HBL1_DMSO_200M_050219_2,6043 HBL1_DMSO_200M_050219_2,6043,GQDINPQRV True True GQDINPQRV 31.538942 513.770312488079 8652216.0 6042.0 ENST00000557407.1_1_14:68264347-68282710:-|nuORF;;ENST00000557366.5_1_14:68270819-68282710:-|nuORF;;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;;nc|ENSG00000072121|Q68DK2-4|ZFYVE26;;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;;ENSG00000072121|ENST00000347230|ZFYVE26;;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 6.19116751352946 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6044 31.547 477.0 176750.0 25 0 8714.6 -1 MAPPEGARS 9 118 479.2270676096695 956.439582286139 2 479.2272521853447 MULTI CID FTMS 0 0 0 6042 39490.546875 0.2108901963650782 1 -0.0139904022216796 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MAPPEGARS_ ENST00000446912.3_2_9:141121428-141121533:+|nuORF 17.11289562659939 0.3734572693229295 4 {M(Oxidation (M))|F}PDGHSKAV 9 -1 + 37.723 0.0 0.0 3.9441 3.9441 68.077 0.0 0.0 0.0 20.7137898137072 3.4385580864580447 3.4385580864580447 2.2676456630076345 0 0.3054621874040891 0.0 0.2887254899964357 0.0 {M(Oxidation (M))|F}PDGHSKAV;{M(Oxidation (M))|F}PPPA[QA]MV;{M(Oxidation (M))|F}PPP[WQ]SV;{M(Oxidation (M))|F}PPPA{[QD]|[EN]|[WG]|[KD]|[RS]}SV;{M(Oxidation (M))|F}PDGHSKG{I|L};{[ES]|[DT]|[{I|L}C]}[KC]APPPE;{M(Oxidation (M))|F}PDGH[KA]SV;{M(Oxidation (M))|F}PPPA{[WS]|[C(Carbamidomethyl (C)){I|L}]}GV;[TA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HK]PE;[{M(Oxidation (M))|F}T][RN]PPPE 3.9441;3.707;3.5764;3.5229;3.3884;3.1069;3.0585;2.9541;2.9222;2.8456 -;-;-;-;-;-;-;-;-;- 459 + 1 2.52 68382.2 1.0 1848 4194 6042 HBL1_DMSO_200M_050219_2,6044 HBL1_DMSO_200M_050219_2,6044,MAPPEGARS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6046 31.552 117.0 457950.0 25 0 47518.0 + 36542 TAKGGDISV 9 91 424.22957966959285 846.4446064059857 2 424.2295104861259 MULTI CID FTMS 0 0 0 6045 545287.625 0.8616176891613624 2 -0.0712814331054687 1 Unmodified _TAKGGDISV_ ENSG00000126267|ENST00000649813|COX6B1 43.77239144664712 0.0547478964384323 4 [TA]KND{I|L}SV 8 2 + 41.882 0.0 0.0 4.948 4.948 81.915 0.0 0.0 0.0 10.438587023789552 10.924778212679485 10.438587023789552 9.262137858390808 0 1.274227503252014 1.2218487496163564 0.6109243748081782 0.0 [TA]KND{I|L}SV;[TA]KGGD{I|L}SV;[VS]Q{[QS]|[NT]}{I|L}SV;[VS][NG][TA]{I|L}SV;[TA]{[QG]|[NA]}[TA]{I|L}SV;[VS][NG]{I|L}[TA]SV;[TA]{[QG]|[NA]}{I|L}[TA]SV;[VS]QK{[CP]|[EA]}SV;[VS][AG]{[QS]|[NT]}{I|L}SV;[TA]K{I|L}[DN]SV 4.948;3.8538;3.7148;3.6476;3.4401;3.2867;3.0793;2.6426;2.6205;2.5195 -;+;-;-;-;-;-;-;-;- + 422 1 2.52 44376.1 1.0 1849 4195 6045 HBL1_DMSO_200M_050219_2,6046 HBL1_DMSO_200M_050219_2,6046,TAKGGDISV True True TAKGGDISV 31.552346 424.229510486126 4606466.5 6045.0 ENSG00000126267|ENST00000649813|COX6B1 3.833563486735026 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6047 31.56 430.0 393280.0 25 0 25796.0 -1 0 88 624.7853458172015 2495.1122774024057 4 625.2880126833916 MULTI CID FTMS 0 0 0 6045 112643.7734375 0.0716704152159007 -10 0.2434940338134765 2 4 {M(Oxidation (M))|F}V{I|L}GSSY 7 -1 47.912 0.0 0.0 1.9202 0.0 0.0 1723.7329773345662 0.0 1723.7329773345662 0.0 -3.0230145643861306 -3.0230145643861306 0.0 0 0.0 0.0 1.575257498915995 0.0 {M(Oxidation (M))|F}V{I|L}GSSY 1.9202 - 270 + 1 2.52 129612.8 1.0 1850 4195 6045 HBL1_DMSO_200M_050219_2,6047 HBL1_DMSO_200M_050219_2,6047, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6048 31.565 290.0 459090.0 25 0 43457.0 -1 0 72 500.0300990391136 2495.114112862568 5 500.2317382693291 MULTI CID FTMS 0 0 0 6045 214663.6875 0.1410024195989733 -8 0.2053241729736328 3 4 VEE 3 -1 7.9318 0.0 0.0 0.31789 0.0 0.0 2119.944295823309 0.0 2119.944295823309 0.0 0.9421249706470308 0.0 0.0 0 0.0 0.0 0.5 0.0 VEE 0.31789 - 43 + 1 2.52 107421.5 1.0 1851 4195 6045 HBL1_DMSO_200M_050219_2,6048 HBL1_DMSO_200M_050219_2,6048, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6049 31.579 800.0 340090.0 25 0 41574.0 + 36643 TATRPITKM 9 166 509.7887012598336 1017.5628495864672 2 509.7898437380791 MULTI CID FTMS 0 0 0 6045 207053.671875 0.0680358721851909 -6 0.165781021118164 4 Unmodified _TATRPITKM_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 47.594388314883695 0.0456443387682827 4 {[CT]|[{M(Oxidation (M))|F}G]}[KP]P{I|L}TMK 9 5 + 60.573 0.0 0.0 5.9528 5.9528 83.709 0.0 0.0 0.0 3.748162098248997 21.702323857151896 3.748162098248997 8.163931154357797 0 1.805462187404089 0.0 1.1549471895720984 0.2887254899964357 {[CT]|[{M(Oxidation (M))|F}G]}[KP]P{I|L}TMK;RT[TA]P{I|L}TMK;[{I|L}V][WQ]{I|L}TMK;[VG]E[Q{I|L}]{I|L}G{M(Oxidation (M))|F}R;{[CT]|[{M(Oxidation (M))|F}G]}[KP]P{I|L}G{M(Oxidation (M))|F}[VG];[VG]T[Q{I|L}]{I|L}TMR;{[VA]|[{I|L}G]}D[Q{I|L}]{I|L}G{M(Oxidation (M))|F}R;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Q{I|L}]{I|L}EMK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TP][{I|L}A]TMK;K[YR][RH]MK 5.9528;5.1505;4.8247;4.0654;3.4258;3.1917;3.1373;2.9541;2.8692;2.86 -;-;-;-;-;-;-;-;-;- 902 1 2.52 206323.4 0.7400000095367432 1852 4195 6045 HBL1_DMSO_200M_050219_2,6049 HBL1_DMSO_200M_050219_2,6049,TATRPITKM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6050 31.589 568.0 199660.0 25 0 21444.0 -1 QSLGMCPQ 8 126 460.70159897724 919.38864502128 2 460.7019836306572 MULTI CID FTMS 0 0 0 6045 156370.9375 0.3415598797874574 15 -0.5831298828125 5 Carbamidomethyl (C) _QSLGMC(Carbamidomethyl (C))PQ_ ENSG00000198691|ENST00000370225|ABCA4 20.453626601364224 0.6087503291685402 4 {[QS]|[NT]}{I|L}RPKP 7 -1 46.256 0.0 0.0 5.0312 0.0 0.0 0.0 109.8891976636385 109.8891976636385 31.105527775844884 0.0 0.0 0.0 0 0.9247425010840048 0.958607314841775 0.4876954943324546 0.6382104921644451 {[QS]|[NT]}{I|L}RPKP 5.0312 - 278 1 2.52 91959.5 1.0 1853 4195 6045 HBL1_DMSO_200M_050219_2,6050 HBL1_DMSO_200M_050219_2,6050,QSLGMCPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6052 31.594 112.0 620440.0 25 0 67340.0 + 24822 MPKKDPVKI 9 94 352.54792044354053 1054.6219319308216 3 352.5474426150322 MULTI CID FTMS 0 0 0 6051 474436.03125 1.0 0 0.0 1 Unmodified _MPKKDPVKI_ ENSG00000101898|ENST00000394552|MCTS2;ENSG00000232119|ENST00000371317|MCTS1;ENST00000479096.1_1_20:30135258-30136578:+|nuORF;ENST00000487133.1_1_X:119739298-119742228:+|nuORF;nc|ENSG00000232119|Q9ULC4-2|MCTS1;nc|ENSG00000232119|Q9ULC4-3|MCTS1 26.268140514670165 0.1969607489560049 4 [KP]KDVPK{I|L}M 9 4 + 48.421 0.0 0.0 4.5914 4.5914 71.071 0.0 0.0 0.0 2.243012119929091 16.508804575418438 2.243012119929091 2.710667722865381 0 0.0 0.0 0.3807196863200844 0.0 [KP]KDVPK{I|L}M;[VP]K[SG]VPK{I|L}M;[VP]G[KS]VPK{I|L}M;[VP]KDKPK{I|L}M;MPKKD[VP]{I|L}K;MPKKD[VP]K{I|L};[KP]V[SG]VPK{I|L}M;[KP]VDKPK{I|L}M;[VP]G[VS]KPK{I|L}M;{[QD]|[EN]|[WG]|[KD]|[RS]}[KP]VPK{I|L}M 4.5914;4.3343;4.1875;4.1837;3.9278;3.8957;3.5797;3.429;3.1637;3.0238 -;-;-;-;-;+;-;-;-;- + 348 1 2.52 57943.4 1.0 1854 4196 6051 HBL1_DMSO_200M_050219_2,6052 HBL1_DMSO_200M_050219_2,6052,MPKKDPVKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6053 31.596 120.0 474590.0 25 0 67099.0 + 4858 DGAPPPNQI 9 92 454.7266376347831 907.4387223363664 2 454.7272827029228 MULTI CID FTMS 0 0 0 6051 516697.84375 0.4834831553325949 -17 0.5168209075927734 2 Unmodified _DGAPPPNQI_ ENSG00000184007|ENST00000647444|PTP4A2;ENST00000532001.6_1_1:32374455-32378590:-|nuORF;nc|ENSG00000184007|Q12974-3|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2 47.594388314883695 0.0456443387682827 4 [DG]APP{I|L}P{[QN]|[E{I|L}]|[KN]} 9 2 + 56.647 0.0 0.0 6.2425 6.2425 74.786 0.0 0.0 0.0 17.4595372608497 5.642492736872597 5.642492736872597 1.0340874929963917 0 1.325257498915995 1.5228787452803376 0.2302046884880938 0.0 [DG]APP{I|L}P{[QN]|[E{I|L}]|[KN]};[DG]AP{I|L}PP{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}PP{I|L}P{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}PP[NP]Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PN{[HG]|PP}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}PP{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}PGG{[HG]|PP}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PP[NP][AG]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PN{[HG]|PP}[AG]{I|L};[NP]EP{I|L}P{[QN]|[E{I|L}]|[KN]} 6.2425;6.1286;4.3185;4.2834;4.2757;4.2045;3.255;2.9261;2.9184;2.6563 -;-;-;-;-;-;-;-;-;- 307 1 2.52 47855.6 1.0 1855 4196 6051 HBL1_DMSO_200M_050219_2,6053 HBL1_DMSO_200M_050219_2,6053,DGAPPPNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6054 31.605 489.0 222060.0 25 0 31381.0 + 24926 MPPKAGQTI 9 118 471.7566710214138 941.4987891096276 2 471.7575256228447 MULTI CID FTMS 0 0 0 6051 224600.90625 0.8057485812684839 -18 0.5327129364013672 3 Unmodified _MPPKAGQTI_ ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB;nc|ENSG00000170322|Q6P4R8-3|NFRKB 34.40172386719151 0.1061884637610825 4 MPPKQQT{I|L} 8 2 + 59.273 0.0 0.0 6.2956 6.2956 91.854 0.0 0.0 0.0 34.83053960621027 10.772664576857302 10.772664576857302 46.761785589754886 0 0.3807196863200844 2.0 1.0629529932484498 0.3054621874040891 MPPKQQT{I|L};[{M(Oxidation (M))|F}V]{I|L}EA[HK]V;[YV]PEA[HK]V;[{M(Oxidation (M))|F}V][KP][HT]T{I|L} 6.2956;1.3288;1.0091;0.3143 -;-;-;- 385 + 1 2.52 87232.6 1.0 1856 4196 6051 HBL1_DMSO_200M_050219_2,6054 HBL1_DMSO_200M_050219_2,6054,MPPKAGQTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6055 31.619 800.0 177740.0 25 0 19821.0 + 22703 LQETYSKQV 9 147 548.2868476096567 1094.5591422861132 2 548.2888671755791 MULTI CID FTMS 0 0 0 6051 142408.59375 0.6632997154932081 -4 0.1111526489257812 4 Unmodified _LQETYSKQV_ chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C;chr20:45814470-45815390|47|12.11|0.65|4.22|+|ENST00000335046|UBE2C,UBE2C;chr20:45815540-45815854|47|12.17|0.56|4.44|+|ENST00000617055|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-2|UBE2C;nc|ENSG00000175063|O00762-3|UBE2C;nc|ENSG00000175063|O00762-4|UBE2C 75.76082778847304 0.0188720312721366 4 [Q{I|L}]ETHQQV{I|L} 9 4 + 58.693 0.0 0.0 5.3623 5.3623 70.501 0.0 0.0 0.0 9.827796776480469 14.36014117354418 9.827796776480469 0.6242413871779462 0 1.1989700043360187 0.958607314841775 0.7614393726401688 0.6861818737241735 [Q{I|L}]ETHQQV{I|L};[Q{I|L}]ETHQVQ{I|L};[Q{I|L}]ETHQ[AG]V{I|L};[Q{I|L}]ETH[AG]QV{I|L};[Q{I|L}][HT]EQQV{I|L};[AG]{I|L}ETHQQV{I|L};[Q{I|L}]ETHQV[AG]{I|L};[Q{I|L}]ETH[AG]VQ{I|L};[Q{I|L}][HT]EQVQ{I|L};[AG]{I|L}ETHQVQ{I|L} 5.3623;5.3053;4.521;4.521;4.4832;4.4644;4.464;4.464;4.4262;4.4074 -;-;-;-;-;-;-;-;-;- 3649 1 2.52 108326.8 0.6100000143051147 1857 4196 6051 HBL1_DMSO_200M_050219_2,6055 HBL1_DMSO_200M_050219_2,6055,LQETYSKQV True True LQETYSKQV 31.618811 548.288867175579 1372038.375 6051.0 ENSG00000175063|ENST00000356455|UBE2C;;chr20:45813290-45813437|47|23.66|0.62|5.25|+|ENST00000372568|UBE2C,UBE2C;;nc|ENSG00000175063|O00762-4|UBE2C;;nc|ENSG00000175063|O00762-2|UBE2C;;chr20:45815540-45815854|47|12.17|0.56|4.44|+|ENST00000617055|UBE2C,UBE2C;;nc|ENSG00000175063|O00762-3|UBE2C;;chr20:45814470-45815390|47|12.11|0.65|4.22|+|ENST00000335046|UBE2C,UBE2C 6.126075108846028 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6057 31.626 173.0 443790.0 25 0 64451.0 41426 VPLFRKSLCV 10 68 387.8999839028438 1160.6781223087314 3 387.8997680544853 MULTI CID FTMS 0 0 0 6056 307983.8125 1.0 0 0.0 1 Unmodified _VPLFRKSLCV_ ENST00000308595.9_1_11:67053337-67053520:+|nuORF 17.86316937532769 0.5478153791579383 4 VPH 3 8 38.553 0.0 0.0 3.3216 0.0 0.0 0.0 824.4753100518434 824.4753100518434 26.56360403813548 0.0 0.0 0.0 0 0.3494850021680094 0.8860566476931632 0.0 0.0 VPH 3.3216 - 20 + 1 2.517 72672.3 1.0 1858 4197 6056 HBL1_DMSO_200M_050219_2,6057 HBL1_DMSO_200M_050219_2,6057,VPLFRKSLCV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6058 31.631 284.0 431460.0 25 0 58369.0 27573 PLCSQRLTC 9 116 340.8370026994652 1019.4891786985957 3 340.8368408083916 MULTI CID FTMS 0 0 0 6056 117478.2265625 0.3663887200362012 4 -0.1728286743164062 2 Unmodified _PLCSQRLTC_ ENSG00000105429|ENST00000251268|MEGF8;nc|ENSG00000105429|Q7Z7M0-2|MEGF8 8.593279151180031 0.6146971463335029 4 DG{I|L}K{I|L} 5 8 20.128 0.0 0.0 1.9743 0.0 0.0 0.0 490.1561678522094 490.1561678522094 3.930286017296307 0.0 0.0 0.0 0 0.0629529932484498 0.744727494896694 0.0 0.0 DG{I|L}K{I|L} 1.9743 - 57 + 1 2.517 103810.6 1.0 1859 4197 6056 HBL1_DMSO_200M_050219_2,6058 HBL1_DMSO_200M_050219_2,6058,PLCSQRLTC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6060 31.636 132.0 443120.0 25 0 65218.0 + 14754 ILDESHERV 9 79 366.5247619376344 1096.5524564131033 3 366.5244018435478 MULTI CID FTMS 0 0 0 6059 234891.78125 0.7108756679706337 -1 0.0122566223144531 1 Unmodified _ILDESHERV_ ENSG00000128534|ENST00000249299|LSM8 29.84058131909904 0.1515068451768857 4 {I|L}{I|L}DESH 6 3 72.964 0.0 0.0 6.6539 0.0 0.0 0.0 399.19980798892817 399.19980798892817 60.19967477623663 0.0 0.0 0.0 0 0.0 2.0 1.2302046884880935 0.0 + {I|L}{I|L}DESH 6.6539 + + 89 + 1 2.517 56900.7 1.0 1860 4198 6059 HBL1_DMSO_200M_050219_2,6060 HBL1_DMSO_200M_050219_2,6060,ILDESHERV False True ILDESHERV 31.636139 366.524401843548 1600517.25 6059.0 ENSG00000128534|ENST00000249299|LSM8 2.3414864540100098 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6061 31.648 683.0 173180.0 25 0 42945.0 + 24688 MMFSFKEQVR 10 93 434.8819719445425 0 434.8820373415947 PEAK CID FTMS 0 0 0 6059 137934.640625 0.5687203018995897 -11 0.2888622283935547 2 Unmodified _MMFSFKEQVR_ REV__ENST00000535264.5_1_5:64865821-64867835:+|nuORF 3.5964929083625545 0.3961065659209837 4 PV 2 -1 9.464 0.0 0.0 1.0906 0.0 0.0 112.33133365303544 556.2871187799436 668.6184524329791 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PV 1.0906 - 16 + 1 2.517 94095.1 1.0 1861 4198 6059 HBL1_DMSO_200M_050219_2,6061 HBL1_DMSO_200M_050219_2,6061,MMFSFKEQVR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6062 31.662 800.0 169790.0 25 0 13589.0 -1 ATGGKMAY 8 131 407.6900502879613 813.3655476427225 2 407.6905700564384 MULTI CID FTMS 0 0 0 6059 124570.0859375 0.933489471367083 4 -0.2272415161132812 3 Oxidation (M) _ATGGKM(Oxidation (M))AY_ ENSG00000101457|ENST00000372622|DNTTIP1 16.942295170755138 0.6606234159769251 4 [R{M(Oxidation (M))|F}]EEAY 6 -1 + 32.937 0.0 0.0 4.0495 4.0495 81.873 0.0 0.0 0.0 6.694699959806982 22.558305890401407 6.694699959806982 23.79493455131808 0 0.805462187404089 0.0 0.0 0.4247425010840047 [R{M(Oxidation (M))|F}]EEAY;[R{M(Oxidation (M))|F}]ET{[{M(Oxidation (M))|F}D]|MM} 4.0495;1.124 -;- 97 1 2.517 108239.9 0.5099999904632568 1862 4198 6059 HBL1_DMSO_200M_050219_2,6062 HBL1_DMSO_200M_050219_2,6062,ATGGKMAY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6063 31.676 800.0 93933.0 25 0 5431.5 + 3648 DAEMTTRMV 9 130 543.2333990915098 1084.4522452498195 2 543.2336913943291 MULTI CID FTMS 0 0 0 6059 114654.9609375 0.8250238807634829 -11 0.2888622283935547 4 2 Oxidation (M) _DAEM(Oxidation (M))TTRM(Oxidation (M))V_ ENSG00000205220|ENST00000358514|PSMB10 49.55428908609986 0.0413471690215031 4 {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V 9 0 + 76.27 0.0 0.0 7.0331 7.0331 92.056 0.0 0.0 0.0 50.40135919786074 5.246502732308755 5.246502732308755 13.57840941039747 0 1.274227503252014 2.0 0.7302046884880937 0.0 + + {[DA]|[EG]}E{M(Oxidation (M))|F}TTR{M(Oxidation (M))|F}V;{[DA]|[EG]}{M(Oxidation (M))|F}ETTR{M(Oxidation (M))|F}V;[YT]RTT{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H];{[DA]|[EG]}E{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;W{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PS]R{M(Oxidation (M))|F}V;[YT]RTT[DP][EC];{[DA]|[EG]}E{[QV]|[N{I|L}]|[RA]|[KV]}{[YD]|[{M(Oxidation (M))|F}M]}[{M(Oxidation (M))|F}V];{[{M(Oxidation (M))|F}C]|[YS]}E{[RE]|[WV]}R{M(Oxidation (M))|F}V;[YT]RT[PS]E[EC];{[DA]|[EG]}{M(Oxidation (M))|F}E[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V 7.0331;5.781;4.004;3.2076;2.9019;2.6601;2.6154;2.3761;2.3378;2.3065 +;-;-;-;-;-;-;-;-;- + 646 + 1 2.517 59914.5 0.5799999833106995 1863 4198 6059 HBL1_DMSO_200M_050219_2,6063 HBL1_DMSO_200M_050219_2,6063,DAEMTTRMV True False DAEMTTRMV 31.675656 543.233691394329 9713295.75 6059.0 ENSG00000205220|ENST00000358514|PSMB10 8.028159459431967 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6064 31.686 572.0 130860.0 25 0 7668.5 -1 PTMVNNTGVV 10 111 524.2598910930748 1046.5052292529494 2 524.2609741091728 MULTI CID FTMS 0 0 0 6059 119055.8984375 0.9201693157117176 1 -0.0630817413330078 5 Oxidation (M) _PTM(Oxidation (M))VNNTGVV_ ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP 19.256988751693697 0.5244284437930726 4 {I|L}[EC]Q[QA]EKV 9 -1 + 31.506 0.0 0.0 3.0106 3.0106 67.93 0.0 0.0 0.0 21.048115563416744 2.5655278536194146 2.5655278536194146 3.521825181113627 0 0.5 0.0 0.9916440611282626 0.4247425010840047 {I|L}[EC]Q[QA]EKV;{I|L}[EC]Q[QA]KEV;[YQ]A[Y{M(Oxidation (M))|F}]EKV;[QA]Y[Y{M(Oxidation (M))|F}]EKV;[YQ]A[YR][{M(Oxidation (M))|F}T]V;[YQ]A[Y{M(Oxidation (M))|F}]KEV 3.0106;2.674;0.52248;0.23482;0.20566;0.18594 -;-;-;-;-;- 135 + 1 2.517 60801.8 1.0 1864 4198 6059 HBL1_DMSO_200M_050219_2,6064 HBL1_DMSO_200M_050219_2,6064,PTMVNNTGVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6065 31.694 482.0 233900.0 25 0 20960.0 41192 VPEAAQPFL 9 102 486.2616812418073 970.5088095504146 2 486.2625305056572 MULTI CID FTMS 0 0 0 6059 119156.9609375 1.0 0 0.0 6 Unmodified _VPEAAQPFL_ ENSG00000105357|ENST00000642316|MYH14;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14 24.020572477871973 0.2255576514309169 4 VPEP 4 5 56.187 0.0 0.0 5.7895 0.0 0.0 0.0 545.2689913385374 545.2689913385374 30.296738652707333 0.0 0.0 0.0 0 1.0269763493273798 1.3979400086720375 0.0 0.0 VPEP 5.7895 - 87 + 1 2.517 91346.2 1.0 1865 4198 6059 HBL1_DMSO_200M_050219_2,6065 HBL1_DMSO_200M_050219_2,6065,VPEAAQPFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6067 31.699 34.0 1470200.0 25 0 117670.0 + 3654 DAEMTTRMV 9 94 535.2355215928542 1068.4564902525085 2 535.2364379763603 MULTI CID FTMS 0 0 0 6066 1713575.5 0.9119779783121392 2 -0.0974903106689453 1 Oxidation (M) _DAEM(Oxidation (M))TTRMV_ ENSG00000205220|ENST00000358514|PSMB10 66.45667989310934 0.0225072657982126 4 {[DA]|[EG]}E{M(Oxidation (M))|F}TTRMV 9 0 + 89.218 0.0 0.0 8.3502 8.3502 94.952 0.0 0.0 0.0 63.30075608481181 6.478174818886373 6.478174818886373 13.57840941039747 0 1.305462187404089 2.0 1.1549471895720984 0.0 + + {[DA]|[EG]}E{M(Oxidation (M))|F}TTRMV;{[DA]|[EG]}{M(Oxidation (M))|F}ETTRMV;[{M(Oxidation (M))|F}T]RTTEEW;W{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PS]RMV;{[CT]|[{M(Oxidation (M))|F}G]}EETTRMV;[{M(Oxidation (M))|F}T]RTT[DP][EC];[{M(Oxidation (M))|F}T]RT[PS]E[EC];{[DA]|[EG]}[YR][{I|L}A]E[EC];{[{M(Oxidation (M))|F}C]|[YS]}E{[RE]|[WV]}RMV;[{M(Oxidation (M))|F}T]R[PS]TE[EC] 8.3502;7.0794;4.249;3.9219;3.9194;3.2753;2.8778;2.8246;2.8087;2.5961 +;-;-;-;-;-;-;-;-;- + 275 + 1 2.517 42139.6 1.0 1866 4199 6066 HBL1_DMSO_200M_050219_2,6067 HBL1_DMSO_200M_050219_2,6067,DAEMTTRMV True False DAEMTTRMV 31.698781 535.23643797636 113812032.0 6066.0 ENSG00000205220|ENST00000358514|PSMB10 8.155879338582357 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6068 31.703 233.0 495090.0 25 0 41861.0 + 44719 YPHDPPKV 8 138 318.16810558323687 951.4824873499106 3 318.1677429080009 MULTI CID FTMS 0 0 0 6066 175868.828125 0.0300864712749438 16 -0.5291767120361328 2 Unmodified _YPHDPPKV_ ENSG00000130725|ENST00000253023|UBE2M;ENST00000593801.1_1_19:59068052-59068513:-|nuORF;ENST00000599829.1_1_19:59068052-59068363:-|nuORF 15.847184025352805 0.6768015514314958 4 YWYPPKV 7 3 + 23.459 0.0 0.0 2.4655 2.4655 63.122 0.0 0.0 0.0 7.032178309427088 1.5261016320615894 1.5261016320615894 1.5261016320615894 0 0.7742275032520141 0.0 0.0 0.0 YWYPPKV;YWYPPVK;YWYPVPK;YWYVPPK 2.4655;2.3051;1.9278;1.6946 -;-;-;- 97 + 1 2.517 95210.5 1.0 1867 4199 6066 HBL1_DMSO_200M_050219_2,6068 HBL1_DMSO_200M_050219_2,6068,YPHDPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6070 31.708 62.0 881750.0 25 0 89745.0 + 24137 LYQEGAKM 8 79 470.2335813609614 938.4526097887228 2 470.2343932986259 MULTI CID FTMS 0 0 0 6069 715628.5 0.4965205570647201 -3 0.0842113494873046 1 Unmodified _LYQEGAKM_ ENSG00000173801|ENST00000393931|JUP 48.345845343767074 0.1470278396477103 4 {I|L}YQEQKM 7 2 + 78.965 0.0 0.0 8.4143 8.4143 93.446 0.0 0.0 0.0 57.07595816438735 11.804782212094338 11.804782212094338 9.33053210369387 0 0.3494850021680094 2.0 0.805462187404089 0.5 {I|L}YQEQKM;{I|L}YQE[AG]KM;{I|L}Y[AG]EQKM;{I|L}Y[AG]E[AG]KM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KME{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[KA]GEME{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[KQ]EME{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[YQ][QP]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 8.4143;7.4201;7.4201;6.4331;1.286;1.1107;0.93605;0.91357;0.15931 -;+;-;-;-;-;-;-;- + 241 + 1 2.517 44405.6 1.0 1868 4200 6069 HBL1_DMSO_200M_050219_2,6070 HBL1_DMSO_200M_050219_2,6070,LYQEGAKM False True LYQEGAKM 31.707654 470.2348 10671397.0 6069.0 ENSG00000173801|ENST00000393931|JUP 5.6297181447347 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6071 31.721 800.0 99297.0 25 0 15529.0 -1 DYGEGDDVDCA 11 97 608.2075598776948 1214.4005668221896 2 608.2079345583916 MULTI CID FTMS 0 0 0 6069 100456.9296875 0.6491046047628682 1 -0.0886173248291015 2 Carbamidomethyl (C) _DYGEGDDVDC(Carbamidomethyl (C))A_ ENSG00000131242|ENST00000621161|RAB11FIP4;ENST00000585058.1_1_17:29848187-29849414:+|nuORF;nc|ENSG00000131242|Q86YS3-2|RAB11FIP4 2.9952420565917617 0.861016188266951 4 DY 2 -1 18.954 0.0 0.0 1.5607 0.0 0.0 918.2992096298652 0.0 918.2992096298652 0.0 9.120768972555595 0.0 0.0 0 0.0 0.0 0.25 0.0 DY 1.5607 + + 53 + 1 2.517 64018.3 0.6299999952316284 1869 4200 6069 HBL1_DMSO_200M_050219_2,6071 HBL1_DMSO_200M_050219_2,6071,DYGEGDDVDCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6072 31.735 800.0 227180.0 25 0 16534.0 + 2483 AQYEEIAQR 9 145 554.2752299722841 1106.5359070113682 2 554.2750732302666 MULTI CID FTMS 0 0 0 6069 168230.015625 1.0 0 0.0 3 Unmodified _AQYEEIAQR_ CON__ENSEMBL:ENSBTAP00000038253;CON__P02538;CON__P04259;CON__P19013;CON__P35908;CON__P35908v2;CON__P48668;ENSG00000170465|ENST00000252250|KRT6C;ENSG00000170477|ENST00000551956|KRT4;ENSG00000172867|ENST00000309680|KRT2;ENSG00000185069|ENST00000332411|KRT76;ENSG00000185479|ENST00000252252|KRT6B;ENSG00000205420|ENST00000330722|KRT6A;ENST00000553087.1_1_12:52864282-52865086:-|nuORF 78.7280429016045 0.0178249292250809 4 [QA]YEE{I|L}AQR 9 0 [QA] + + 60.613 17.715 8.8979 5.4777 5.4777 54.576 0.0 0.0 0.0 0.0 38.14817443775116 0.0 0.0 0 0.8807196863200843 0.0 0.7134679910804405 0.9634679910804403 + + [QA]YEE{I|L}AQR 5.4777 + + 568 + 1 2.517 139437.1 0.6800000071525574 1870 4200 6069 HBL1_DMSO_200M_050219_2,6072 HBL1_DMSO_200M_050219_2,6072,AQYEEIAQR True True AQYEEIAQR 31.735322 554.275073230267 1188900.125 6069.0 ENSG00000185479|ENST00000252252|KRT6B;;P02538;;ENST00000553087.1_1_12:52864282-52865086:-|nuORF;;P48668;;ENSG00000170465|ENST00000252250|KRT6C;;P35908v2;;ENSG00000170477|ENST00000551956|KRT4;;ENSEMBL:ENSBTAP00000038253;;P04259;;ENSG00000205420|ENST00000330722|KRT6A;;ENSG00000172867|ENST00000309680|KRT2;;P35908;;P19013;;ENSG00000185069|ENST00000332411|KRT76 6.548296292622884 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 6073 31.743 415.0 469070.0 25 0 86893.0 + -1 MAPPAHKSI 9 116 484.2537439869064 966.4929350406128 2 484.2535888552666 MULTI CID FTMS 0 0 0 6069 169751.0 0.92402177085892 -1 0.0088729858398437 4 Carbamidomethyl (C) _NHTLC(Carbamidomethyl (C))LPI_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 38.15118350030904 0.2652218139009398 4 [HN]T{I|L} 4 -1 46.969 0.0 0.0 4.8597 0.0 0.0 0.0 498.23671490805344 498.23671490805344 4.631317125837185 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.5994850021680094 1.2302046884880935 [HN]T{I|L} 4.8597 + + 192 1 2.517 148618.1 1.0 1871 4200 6069 HBL1_DMSO_200M_050219_2,6073 HBL1_DMSO_200M_050219_2,6073,NHTLCLPI False False MAPPAHKSI 31.742718 484.253588855267 1221276.5 6069.0 ENSG00000108021|ENST00000695737|TASOR2;;nc|ENSG00000108021|Q5VWN6-2|TASOR2 4.04806399345398 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6074 31.751 484.0 486430.0 25 0 44267.0 22074 LPPPSPWPK 9 164 340.19524512398374 1017.5639059721512 3 340.1952392458916 MULTI CID FTMS 0 0 0 6069 169486.3125 0.7106203277018283 -2 0.0719547271728515 5 Unmodified _LPPPSPWPK_ ENSG00000103365|ENST00000309859|GGA2 36.04419817259434 0.0971720506436186 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}TMK 9 7 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 36.503 11.065 2.5779 3.5873 3.5873 47.396 0.0 0.0 0.0 0.0 23.404112767164733 0.0 0.0 0 0.5 0.0 0.7302046884880937 0.3054621874040891 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}TMK 3.5873 - 149 + 1 2.517 198403.0 1.0 1872 4200 6069 HBL1_DMSO_200M_050219_2,6074 HBL1_DMSO_200M_050219_2,6074,LPPPSPWPK True False PLPGVSTIPLTMK 31.751272 340.195239245892 0.0 6069.0 ENSG00000169894|ENST00000379458|MUC3A;;nc|ENSG00000169894|Q02505-3|MUC3A;;nc|ENSG00000169894|Q02505-2|MUC3A;;nc|ENSG00000169894|Q02505-4|MUC3A;;nc|ENSG00000169894|Q02505-5|MUC3A -0.128385121623675 4.0 False 13.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6075 31.765 800.0 190710.0 25 0 37304.0 + 13187 HGFSPRTV 8 133 450.7369548031176 899.4593566730352 2 450.7374145388603 MULTI CID FTMS 0 0 0 6069 127458.6015625 0.1895802617243277 -6 0.1694831848144531 6 Unmodified _HGFSPRTV_ ENST00000494664.5_1_3:119217469-119217535:+|nuORF 56.17704186161178 0.1143274477948619 4 HG{M(Oxidation (M))|F}S[RP]TV 8 0 + 71.906 0.0 0.0 7.9943 7.9943 94.539 0.0 0.0 0.0 41.46047321035975 9.878941709120454 9.878941709120454 14.27948461635836 0 1.9291746928241125 1.6989700043360187 0.2215141619232908 0.3054621874040891 + + HG{M(Oxidation (M))|F}S[RP]TV;HG{M(Oxidation (M))|F}S[RV][TP];HGKK{[QC]|[C(Carbamidomethyl (C))A]}TV;HGKK[YN][PG];HR[HK][WH];HGKK{[QS]|[NT]}{[ES]|[DT]|[{I|L}C]};{[HG]|PP}{M(Oxidation (M))|F}[HK]G{[MS]|[{M(Oxidation (M))|F}A]};H[YQ][RP]TV;HV[{I|L}T]{[QC]|[C(Carbamidomethyl (C))A]}TV;VH[{I|L}T]{[QC]|[C(Carbamidomethyl (C))A]}TV 7.9943;6.4068;4.881;3.1308;2.7962;2.7726;2.7174;2.6147;2.5248;2.2249 +;-;-;-;-;-;-;-;-;- + 441 + 1 2.517 119941.4 0.5400000214576721 1873 4200 6069 HBL1_DMSO_200M_050219_2,6075 HBL1_DMSO_200M_050219_2,6075,HGFSPRTV True True HGFSPRTV 31.765089 450.73741453886 17944663.5 6069.0 ENST00000494664.5_1_3:119217469-119217535:+|nuORF 8.3431765238444 2.0 True 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6076 31.779 800.0 137410.0 25 0 37790.0 -1 ISNVCLIMFL 10 82 613.3181684892262 1224.6217840452523 2 613.3192016482353 MULTI CID FTMS 0 0 0 6069 118024.3125 1.0 0 0.0 7 Carbamidomethyl (C),Oxidation (M) _ISNVC(Carbamidomethyl (C))LIM(Oxidation (M))FL_ ENST00000490918.5_1_6:3138827-3138989:+|nuORF 6.2057823575117 0.6979311171683138 4 {I|L} 1 -1 13.099 0.0 0.0 1.0696 0.0 0.0 1093.526872401501 0.0 1093.526872401501 0.0 3.184110487935872 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0696 + + 40 + 1 2.517 84360.6 0.550000011920929 1874 4200 6069 HBL1_DMSO_200M_050219_2,6076 HBL1_DMSO_200M_050219_2,6076,ISNVCLIMFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6077 31.792 652.0 289790.0 25 0 23809.0 -1 0 66 832.7122452689769 2495.1149064071305 3 833.0491821169853 MULTI CID FTMS 0 0 0 6069 119718.5234375 0.5283453470870718 -7 0.1947879791259765 8 4 [RD]WRDD 6 -1 22.215 0.0 0.0 0.89035 0.0 0.0 0.0 1648.726511979727 1648.726511979727 12.61107503885448 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.2614393726401688 [RD]WRDD 0.89035 - 55 1 2.517 138465.9 1.0 1875 4200 6069 HBL1_DMSO_200M_050219_2,6077 HBL1_DMSO_200M_050219_2,6077, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6079 31.796 8.3 6269300.0 25 0 1122800.0 1997 APAKPGGA 8 68 334.6900910434866 667.3656291537732 2 334.6898376345634 MULTI CID FTMS 0 0 0 6078 7586703.5 0.8402594594905903 1 -0.0666694641113281 1 Unmodified _APAKPGGA_ ENSG00000139842|ENST00000375440|CUL4A;ENST00000474116.5_1_13:113863941-113874010:+|nuORF;ENST00000494985.5_1_13:113863983-113873323:+|nuORF 2.302733041254933 0.8103549651115762 4 A{I|L}NHT{I|L} 6 7 + 67.98 0.0 0.0 10.186 10.186 90.036 0.0 0.0 0.0 22.16531835603314 5.967430773149204 5.967430773149204 5.967430773149204 0 0.75 2.0 1.2614393726401687 0.3494850021680094 A{I|L}NHT{I|L};[HN]T{I|L}{I|L}A;A{I|L}GGHT{I|L};[HN]{I|L}T{I|L}A;[HT]N{I|L}{I|L}A;[HT]{I|L}N{I|L}A;[HT]GG{I|L}{I|L}A;[HT]{I|L}GG{I|L}A 10.186;9.2921;8.251;7.6551;6.0572;4.3608;3.3727;2.2001 -;-;-;-;-;-;-;- 121 + 1 2.517 47752.4 1.0 1876 4201 6078 HBL1_DMSO_200M_050219_2,6079 HBL1_DMSO_200M_050219_2,6079,APAKPGGA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6080 31.797 14.0 5270800.0 25 0 843560.0 + 24267 MAPPPPRSV 9 57 476.256952162498 950.499351391796 2 476.2578613162041 MULTI CID FTMS 0 0 0 6078 4530444.0 0.5969778487580322 -11 0.3862209320068359 2 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 4 {[DS]|[MA]|[CV]|TT}PPP 5 4 48.015 0.0 0.0 5.0516 0.0 0.0 0.0 454.2420748346313 454.2420748346313 44.916440611282624 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + {[DS]|[MA]|[CV]|TT}PPP 5.0516 + + 25 + 1 2.517 62421.3 1.0 1877 4201 6078 HBL1_DMSO_200M_050219_2,6080 HBL1_DMSO_200M_050219_2,6080,MAPPPPRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6081 31.799 27.0 2288100.0 25 0 264580.0 15348 IPLTLHTV 8 73 447.2761269222121 892.5377009112242 2 447.2762939333916 MULTI CID FTMS 0 0 0 6078 2358906.25 0.6408897092699796 18 -0.549652099609375 3 Unmodified _IPLTLHTV_ ENSG00000039600|ENST00000265007|SOX30;nc|ENSG00000039600|O94993-2|SOX30 32.116972079565 0.368454113111938 4 {I|L}PP 3 6 53.5 0.0 0.0 5.9941 0.0 0.0 0.0 582.3261513865776 582.3261513865776 46.510234424404686 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 {I|L}PP 5.9941 - 124 + 1 2.517 53849.3 1.0 1878 4201 6078 HBL1_DMSO_200M_050219_2,6081 HBL1_DMSO_200M_050219_2,6081,IPLTLHTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6082 31.8 39.0 1256000.0 25 0 197170.0 + 11224 GEPREGEI 8 64 443.7160275990602 885.4175022649205 2 443.7169677615166 MULTI CID FTMS 0 0 0 6078 1550406.0 0.1879012724674859 -8 0.2834053039550781 4 Unmodified _GEPREGEI_ REV__ENST00000557806.5_1_14:24641555-24641950:+|nuORF 38.17557092003332 0.2648138137323925 4 {[DA]|[EG]}PREGE{I|L} 8 -1 + 63.321 0.0 0.0 7.1515 7.1515 81.828 0.0 0.0 0.0 15.873278429480422 43.71645960868548 15.873278429480422 3.0102999566398125 0 0.7429928190999391 2.0 0.0 0.3494850021680094 {[DA]|[EG]}PREGE{I|L};{[DA]|[EG]}PRADE{I|L};{[DA]|[EG]}PREAD{I|L};{[DA]|[EG]}PRAED{I|L};{[DA]|[EG]}PRE{I|L}{[DA]|[EG]};[RP]ADEGE{I|L};[RP]ADADE{I|L};[RP]ADEAD{I|L};[RP]ADAED{I|L};[VP]{[QD]|[EN]|[WG]|[KD]|[RS]}EGE{I|L} 7.1515;6.8115;6.4715;6.1315;5.0338;4.7018;4.3619;4.0219;3.6819;3.6041 +;-;-;-;-;-;-;-;-;- + 185 1 2.517 45901.5 1.0 1879 4201 6078 HBL1_DMSO_200M_050219_2,6082 HBL1_DMSO_200M_050219_2,6082,GEPREGEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6083 31.801 39.0 1233900.0 25 0 144270.0 + 24944 MPPPPPQGV 9 66 468.236188042907 934.457823152614 2 468.2365600466728 MULTI CID FTMS 0 0 0 6078 1456113.125 0.8388922067653907 4 -0.1628990173339843 5 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 42.96799951952854 0.0591636306142405 4 PPPPQR 6 4 28.338 0.0 0.0 3.0325 0.0 0.0 244.08906752754064 0.0 244.08906752754064 0.0 14.358251853052746 0.0 0.0 0 0.6822333069283655 0.0 0.0 0.0 PPPPQR 3.0325 - 73 1 2.517 46534.5 1.0 1880 4201 6078 HBL1_DMSO_200M_050219_2,6083 HBL1_DMSO_200M_050219_2,6083,MPPPPPQGV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6084 31.803 84.0 445280.0 25 0 46542.0 + 13235 HHPDYNNEL 9 62 569.7490046105385 1137.4834562878768 2 569.7493163943291 MULTI CID FTMS 0 0 0 6078 609905.9375 0.1493460237038898 7 -0.2960090637207031 6 Unmodified _HHPDYNNEL_ ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11 25.399314129420983 0.2080152500878129 4 HH[DP]YNNE{I|L} 9 0 + 43.49 0.0 0.0 3.8233 3.8233 77.062 0.0 0.0 0.0 15.351584312837044 8.697114610913488 8.697114610913488 9.208187539523747 0 0.1549471895720985 1.154901959985743 0.0 0.4247425010840047 + + HH[DP]YNNE{I|L};HH[DP]YNGGE{I|L};HH[DP]YGGNE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NNY[HC]D{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}YNNE{I|L};[DP]HHYNNE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGNY[HC]D{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NGGY[HC]D{I|L};[DP]HHYGGNE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}YGGNE{I|L} 3.8233;3.0138;3.0138;2.4737;2.1935;2.1935;1.6642;1.6642;1.384;1.384 +;-;-;-;-;-;-;-;-;- + 97 1 2.517 36654.3 1.0 1881 4201 6078 HBL1_DMSO_200M_050219_2,6084 HBL1_DMSO_200M_050219_2,6084,HHPDYNNEL False True HHPDYNNEL 31.802882 569.749316394329 154951856.0 6078.0 ENSG00000120509|ENST00000239666|PDZD11;;nc|ENSG00000120509|Q5EBL8-2|PDZD11 9.70125643412272 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6085 31.805 84.0 610600.0 25 0 29472.0 + 5669 DPFSSKHNV 9 100 515.7502200114754 1029.4858870897508 2 515.7501098513603 MULTI CID FTMS 0 0 0 6078 465633.78125 1.0 0 0.0 7 Unmodified _DPFSSKHNV_ ENSG00000108055|ENST00000361804|SMC3 69.10491478415734 0.0214449631113747 4 DP{M(Oxidation (M))|F}S[KS]HNV 9 0 + 79.285 0.0 0.0 7.7014 7.7014 89.907 0.0 0.0 0.0 68.57152383866128 10.212185284761176 10.212185284761176 8.851518780601921 0 0.805462187404089 2.0 0.3807196863200844 1.1382104921644451 + + DP{M(Oxidation (M))|F}S[KS]HNV;DPS[KS]{M(Oxidation (M))|F}HNV;DPS{M(Oxidation (M))|F}[KS]HNV;DP{M(Oxidation (M))|F}S[KS]HGGV;[DP]R[KS]S{M(Oxidation (M))|F}{[HG]|PP};DPS[KS]{M(Oxidation (M))|F}HGGV;DPS{M(Oxidation (M))|F}[KS]HGGV;[DP]{M(Oxidation (M))|F}R[KS]S{[HG]|PP};[DP]R{M(Oxidation (M))|F}[KS]S{[HG]|PP};[DP]R[KS]{M(Oxidation (M))|F}S{[HG]|PP} 7.7014;6.8416;6.5492;6.5265;5.7286;5.6667;5.3743;5.2608;4.8688;4.5764 +;-;-;-;-;-;-;-;-;- + 318 + 1 2.517 44890.4 1.0 1882 4201 6078 HBL1_DMSO_200M_050219_2,6085 HBL1_DMSO_200M_050219_2,6085,DPFSSKHNV True True DPFSSKHNV 31.804774 515.75010985136 2639781.5 6078.0 ENSG00000108055|ENST00000361804|SMC3 6.530638853708903 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6086 31.808 184.0 341430.0 25 0 31657.0 + 21136 LPAPPTQNM 9 100 492.7439910645884 983.4734291959768 2 492.7449523806572 MULTI CID FTMS 0 0 0 6078 325740.03125 0.8859402821938742 -6 0.244110107421875 8 Oxidation (M) _LPAPPTQNM(Oxidation (M))_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 57.47134341890925 0.0274820932774257 4 [{I|L}P]APPTQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 9 0 + 37.967 0.0 0.0 3.8605 3.8605 77.822 0.0 0.0 0.0 9.25514336734161 2.7520868087349086 2.7520868087349086 9.208187539523756 0 0.8807196863200843 1.5228787452803376 0.3807196863200844 0.0 + + [{I|L}P]APPTQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[{I|L}P]APPT[AG]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[PA]{I|L}PPTQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[PA]{I|L}PPT[AG]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[{I|L}P]AP{[SA]|[TG]}[PA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[PA]SHRR{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[PA]{I|L}P{[SA]|[TG]}[PA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 3.8605;2.9242;2.9068;1.9705;1.0941;0.32007;0.14045 +;-;-;-;-;-;- + 208 1 2.517 52327.6 1.0 1883 4201 6078 HBL1_DMSO_200M_050219_2,6086 HBL1_DMSO_200M_050219_2,6086,LPAPPTQNM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6087 31.813 281.0 189330.0 25 0 25772.0 + 45148 YQDTPKQI 8 93 496.7559020729626 0 496.7561828494072 PEAK CID FTMS 0 0 0 6078 165879.3125 1.0 0 0.0 9 Unmodified _YQDTPKQI_ ENSG00000048162|ENST00000614830|NOP16 29.081581746732265 0.2463278183412906 4 PESN 4 7 15.662 0.0 0.0 1.5796 0.0 0.0 98.07202783839156 463.2311190240844 561.303146862476 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PESN 1.5796 - 123 + 1 2.517 50100.4 1.0 1884 4201 6078 HBL1_DMSO_200M_050219_2,6087 HBL1_DMSO_200M_050219_2,6087,YQDTPKQI False True YQDTPKQI 31.813497 496.756182849407 1667122.25 6078.0 ENSG00000048162|ENST00000614830|NOP16 4.679361502329509 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6088 31.827 800.0 209710.0 25 0 21468.0 + 19070 LDQSAYCF 8 144 473.7006235092593 945.3866940853186 2 473.7003661990166 MULTI CID FTMS 0 0 0 6078 149566.890625 0.5390858426764815 8 -0.3024749755859375 10 Unmodified _LDQSAYCF_ REV__ENSG00000188419|ENST00000357749|CHM 21.74664581756881 0.5868176546531598 4 {I|L}DQ 3 -1 47.815 0.0 0.0 5.0577 0.0 0.0 0.0 586.1985567682249 586.1985567682249 38.48223438645677 0.0 0.0 0.0 0 0.3562030387680848 1.3010299956639813 0.0 0.805462187404089 {I|L}DQ 5.0577 + + 171 + 1 2.517 130975.6 0.6100000143051147 1885 4201 6078 HBL1_DMSO_200M_050219_2,6088 HBL1_DMSO_200M_050219_2,6088,LDQSAYCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6089 31.84 724.0 163960.0 25 0 18675.0 + 16534 KAVETVHNL 9 140 505.7840294599224 1009.5535059866448 2 505.7855407595634 MULTI CID FTMS 0 0 0 6078 97000.1875 0.2520017620604611 -6 0.244110107421875 11 Unmodified _KAVETVHNL_ ENSG00000101158|ENST00000652272|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;ENST00000478389.5_1_20:57566845-57568278:+|nuORF;nc|ENSG00000101158|Q8IXH7|NELFCD 87.25819977447905 0.0157581688916699 4 KAVETVHN{I|L} 9 0 + 75.358 0.0 0.0 7.4645 7.4645 82.242 0.0 0.0 0.0 8.189929242599106 15.607346925073957 8.189929242599106 2.984550065040281 0 2.3481362441963327 0.0 0.6307196863200843 1.174742501084005 + + KAVETVHN{I|L};KA{I|L}DTVHN{I|L};K{I|L}GETVHN{I|L};{I|L}KGETVHN{I|L};K{I|L}ADTVHN{I|L};{I|L}KADTVHN{I|L};KAVETV{I|L}[HN];KA{I|L}DTV{I|L}[HN];KAVETVHGG{I|L};K{I|L}GETV{I|L}[HN] 7.4645;7.1689;6.801;6.6533;6.5054;6.3577;5.9186;5.6229;5.3888;5.2551 +;-;-;-;-;-;-;-;-;- + 1260 + 1 2.517 90855.7 1.0 1886 4201 6078 HBL1_DMSO_200M_050219_2,6089 HBL1_DMSO_200M_050219_2,6089,KAVETVHNL True True KAVETVHNL 31.839865 505.785540759563 5404559.5 6078.0 ENST00000474543.5_1_20:57564608-57568882:+|nuORF;;nc|ENSG00000101158|Q8IXH7|NELFCD;;ENST00000478389.5_1_20:57566845-57568278:+|nuORF;;ENSG00000101158|ENST00000652272|NELFCD 6.90577507019043 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6090 31.848 487.0 141000.0 25 0 14595.0 + + 43683 YYITGESK 8 97 481.2360359548631 960.4575189765262 2 481.2360412478447 MULTI CID FTMS 0 0 0 6078 95635.421875 0.8939628736196935 -2 0.0974903106689453 12 Unmodified _YAVVESFF_ nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENSG00000096384|ENST00000371646|HSP90AB1 14.581692164780916 0.6954967302934248 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YT][{I|L}P]S{M(Oxidation (M))|F} 8 -1 + 30.608 0.0 0.0 3.1868 3.1868 79.81 0.0 0.0 0.0 19.77043197930871 14.024174299985006 14.024174299985006 30.60788741577753 0 0.3252574989159953 2.0 0.3252574989159953 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YT][{I|L}P]S{M(Oxidation (M))|F} 3.1868 - 120 + 1 2.517 54710.4 1.0 1887 4201 6078 HBL1_DMSO_200M_050219_2,6090 HBL1_DMSO_200M_050219_2,6090,YAVVESFF False False YYITGESK 31.848457 481.236041247845 610289.25 6078.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;nc|ENSG00000205940|Q58FF8|HSP90AB2P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 4.0899795691172285 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6091 31.858 569.0 235220.0 25 0 33974.0 + 33268 SFPASSGVSH 10 131 488.23034326897925 974.4461336047584 2 488.2328063845634 MULTI CID FTMS 0 0 0 6078 79725.0859375 0.1082005123147929 92 -3.2157058715820312 13 Unmodified _SFPASSGVSH_ ENSG00000160294|ENST00000291688|MCM3AP;MCM3AP|p.A160Gfs*2|1|0.53|ENSG00000160294|chr21:46284808-46284809|-/C|frameshift_variant 43.85829265575387 0.1168243637355526 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PA{[CA]|SS}[VG]SH 10 0 + 54.213 0.0 0.0 5.5634 5.5634 72.068 0.0 0.0 0.0 32.00637293795115 2.9922793352956845 2.9922793352956845 1.0199260499030416 0 0.3807196863200844 2.0 1.416386562212267 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PA{[CA]|SS}[VG]SH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[WK]H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAC[HK]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PA{[CA]|SS}{[HG]|PP}W;{[QN]|[E{I|L}]|[KN]}R{[CA]|SS}APDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP][VG]PDT;{[QN]|[E{I|L}]|[KN]}Y[HT]PDT;{[QN]|[E{I|L}]|[KN]}[VG]{[CA]|SS}APDT;{[QD]|[EN]|[WG]|[KD]|[RS]}P[MT]APDT;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QD]|[EN]|[WG]|[KD]|[RS]}[VG]PDT 5.5634;5.4588;4.2231;3.698;3.2253;2.7691;2.2913;2.2803;2.2647;2.1512 +;-;-;-;-;-;-;-;-;- + 428 + 1 2.517 107858.5 1.0 1888 4201 6078 HBL1_DMSO_200M_050219_2,6091 HBL1_DMSO_200M_050219_2,6091,SFPASSGVSH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6093 31.863 20.0 2862100.0 25 0 466850.0 36644 TATRPITKM 9 74 509.7887012598336 1017.5628495864672 2 509.7895080447197 MULTI CID FTMS 0 0 0 6092 3027840.75 0.9949197442317168 1 -0.012338638305664 1 Unmodified _TATRPITKM_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 23.78978130925829 0.2284941198415988 4 TMK 3 7 44.693 0.0 0.0 4.3921 0.0 0.0 639.3705910640482 0.0 639.3705910640482 0.0 23.26606256887672 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 TMK 4.3921 - 76 1 2.505 52814.2 1.0 1889 4202 6092 HBL1_DMSO_200M_050219_2,6093 HBL1_DMSO_200M_050219_2,6093,TATRPITKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6094 31.864 60.0 2720700.0 25 0 236510.0 -1 0 45 624.7853458172015 2495.1122774024057 4 625.0375244021416 MULTI CID FTMS 0 0 0 6092 1621131.125 0.9092735101071024 1 -0.012338638305664 2 4 DD 2 -1 24.776 0.0 0.0 0.99299 0.0 0.0 728.3323152890576 1533.702158370397 2262.0344736594548 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 DD 0.99299 - 9 + 1 2.505 126545.3 1.0 1890 4202 6092 HBL1_DMSO_200M_050219_2,6094 HBL1_DMSO_200M_050219_2,6094, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6095 31.866 49.0 2240200.0 25 0 245330.0 -1 0 50 500.0300990391136 2495.114112862568 5 500.2312194705009 MULTI CID FTMS 0 0 0 6092 1423878.25 0.935278252239806 -1 0.0666694641113281 3 4 DD 2 -1 22.959 0.0 0.0 0.92015 0.0 0.0 728.336131264129 1533.7022164005884 2262.038347664717 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 DD 0.92015 - 34 + 1 2.505 90500.8 1.0 1891 4202 6092 HBL1_DMSO_200M_050219_2,6095 HBL1_DMSO_200M_050219_2,6095, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6096 31.868 97.0 580390.0 25 0 82854.0 + 4859 DGAPPPNQI 9 91 454.7266376347831 907.4387223363664 2 454.7269164919853 MULTI CID FTMS 0 0 0 6092 591253.6875 0.5532463545035493 -11 0.3951587677001953 4 Unmodified _DGAPPPNQI_ ENSG00000184007|ENST00000647444|PTP4A2;ENST00000532001.6_1_1:32374455-32378590:-|nuORF;nc|ENSG00000184007|Q12974-3|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2 61.60191391372663 0.0251951588191061 4 [DG]APP{I|L}P{[QN]|[E{I|L}]|[KN]} 9 2 + 53.009 0.0 0.0 5.8416 5.8416 86.201 0.0 0.0 0.0 9.762123167845424 4.648459784582961 4.648459784582961 9.762123167845424 0 1.274227503252014 1.5228787452803376 0.2396518287104437 0.0 [DG]APP{I|L}P{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}PPPNQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PP{I|L}P{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}PN{[HG]|PP}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PPPGGQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PPPN[AG]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PGG{[HG]|PP}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PN{[HG]|PP}[AG]{I|L};[NP]EP{I|L}P{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}[YK]NQ{I|L} 5.8416;4.7658;3.9176;3.8151;3.7451;3.36;2.7944;2.4092;2.3714;2.0658 -;-;-;-;-;-;-;-;-;- 282 1 2.505 47949.3 1.0 1892 4202 6092 HBL1_DMSO_200M_050219_2,6096 HBL1_DMSO_200M_050219_2,6096,DGAPPPNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6097 31.871 148.0 461600.0 25 0 56091.0 + 18672 LAINGSRLDH 10 93 365.8692653838752 1094.5859667518257 3 366.2019836306572 MULTI CID FTMS 0 0 0 6092 302224.90625 0.1206311002220335 -10 0.380340576171875 5 Unmodified _LAINGSRLDH_ REV__ENSG00000174989|ENST00000652555|FBXW8;REV__nc|ENSG00000174989|Q8N3Y1-2|FBXW8 5.731851221503515 0.7001233259664787 4 [{I|L}A]EE 4 -1 24.693 0.0 0.0 2.2559 0.0 0.0 0.0 649.3626750860632 649.3626750860632 5.395906230238122 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A]EE 2.2559 - 60 1 2.505 59031.0 1.0 1893 4202 6092 HBL1_DMSO_200M_050219_2,6097 HBL1_DMSO_200M_050219_2,6097,LAINGSRLDH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6099 31.882 491.0 168820.0 25 0 12421.0 + 34957 SQLDEVRQA 9 114 523.2658892237934 1044.5172255143866 2 523.2670165896416 MULTI CID FTMS 0 0 0 6098 112139.2578125 0.6440960611389861 -3 0.1676254272460937 1 Unmodified _SQLDEVRQA_ ENSG00000090316|ENST00000303400|MAEA;ENST00000503162.1_1_4:1326530-1332954:+|nuORF;ENST00000506530.5_1_4:1326530-1332660:+|nuORF;ENST00000512289.5_1_4:1323768-1332954:+|nuORF;ENST00000514708.5_1_4:1309356-1332271:+|nuORF;ENST00000515766.1_1_4:1326530-1330951:+|nuORF;nc|ENSG00000090316|Q7L5Y9-2|MAEA;nc|ENSG00000090316|Q7L5Y9-3|MAEA 36.506200033944 0.094635877243972 4 {[QS]|[NT]}{I|L}DEVP 7 3 47.211 0.0 0.0 4.5199 0.0 0.0 0.0 273.1256502740844 273.1256502740844 32.9478104638698 0.0 0.0 0.0 0 0.8494850021680094 1.0 0.3494850021680094 0.0 {[QS]|[NT]}{I|L}DEVP 4.5199 - 585 + 1 2.505 68705.1 1.0 1894 4203 6098 HBL1_DMSO_200M_050219_2,6099 HBL1_DMSO_200M_050219_2,6099,SQLDEVRQA True True SQLDEVRQA 31.881713 523.267016589642 1003420.625 6098.0 ENST00000512289.5_1_4:1323768-1332954:+|nuORF;;nc|ENSG00000090316|Q7L5Y9-2|MAEA;;nc|ENSG00000090316|Q7L5Y9-3|MAEA;;MAEA|p.A228V|1|0.33|ENSG00000090316|chr4:1332783-1332783|C/T|missense_variant;;ENST00000514708.5_1_4:1309356-1332271:+|nuORF;;ENST00000506530.5_1_4:1326530-1332660:+|nuORF;;ENST00000515766.1_1_4:1326530-1330951:+|nuORF;;ENST00000503162.1_1_4:1326530-1332954:+|nuORF;;ENSG00000090316|ENST00000303400|MAEA 4.461084604263306 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6100 31.884 137.0 740980.0 25 0 131680.0 27510 PKLPPRGVG 9 79 307.5275544155195 919.5608338467584 3 307.5270873904228 MULTI CID FTMS 0 0 0 6098 456383.34375 0.0751865946420677 -37 1.265310287475586 2 Unmodified _PKLPPRGVG_ ENSG00000169184|ENST00000302326|MN1 10.823927491677226 0.5436922275383211 4 {I|L}[KP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P 7 6 22.535 0.0 0.0 2.4507 0.0 0.0 0.0 125.07247339420157 125.07247339420157 10.752729870336475 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 {I|L}[KP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P 2.4507 - 29 + 1 2.505 84609.3 1.0 1895 4203 6098 HBL1_DMSO_200M_050219_2,6100 HBL1_DMSO_200M_050219_2,6100,PKLPPRGVG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6101 31.898 800.0 182740.0 25 0 9225.8 + -1 SMQCSQESM 9 155 544.194600326848 1086.374647720496 2 544.1954833865166 MULTI CID FTMS 0 0 0 6098 196340.078125 0.0460926068335537 -9 0.3371086120605469 3 Carbamidomethyl (C) _SMQC(Carbamidomethyl (C))SQESM_ REV__ENSG00000171115|ENST00000307271|GIMAP8 14.838274106304384 0.4350285940865338 4 MSSAN 5 -1 28.984 0.0 0.0 2.668 0.0 0.0 357.1025662769396 236.06789575748283 593.1704620344225 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1307196863200843 0.5994850021680094 MSSAN 2.668 - 637 + 1 2.505 116711.7 0.7300000190734863 1896 4203 6098 HBL1_DMSO_200M_050219_2,6101 HBL1_DMSO_200M_050219_2,6101,SMQCSQESM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6102 31.912 800.0 262200.0 25 0 9489.1 -1 0 238 344.16918808646926 343.1619116198693 1 344.1698791384697 MULTI CID FTMS 0 0 0 6098 128706.484375 1.0 0 0.0 4 4 M 1 -1 13.099 0.0 0.0 3.8171 0.0 0.0 194.11054856010207 0.0 194.11054856010207 0.0 2.503011752845925 0.0 0.0 0 0.0 0.0 0.0 0.0 M 3.8171 - 41 + 1 2.505 172055.8 1.0 1897 4203 6098 HBL1_DMSO_200M_050219_2,6102 HBL1_DMSO_200M_050219_2,6102, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6104 31.928 800.0 126210.0 25 0 5440.2 -1 0 88 628.7839933240209 2511.1068674296835 4 629.0361816287041 MULTI CID FTMS 0 0 0 6103 67606.6328125 0.6973531417379802 1 -0.0426177978515625 1 4 DM 2 -1 18.711 0.0 0.0 0.74514 0.0 0.0 728.3295552783308 1533.7011547713037 2262.0307100496343 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 DM 0.74514 - 200 + 1 2.505 82225.6 0.4699999988079071 1898 4204 6103 HBL1_DMSO_200M_050219_2,6104 HBL1_DMSO_200M_050219_2,6104, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6105 31.93 61.0 813700.0 25 0 129130.0 + 26136 NPSMPQRTV 9 68 515.25975250221 1028.5049520712198 2 515.2603027224541 MULTI CID FTMS 0 0 0 6103 736928.5625 0.1244243339339317 -12 0.4339523315429687 2 Unmodified _NPSMPQRTV_ ENSG00000197943|ENST00000564138|PLCG2 45.739877483867886 0.0497104363764649 4 NPSMPQ 6 3 67.964 0.0 0.0 6.608 0.0 0.0 0.0 371.2038973443969 371.2038973443969 32.28978457299817 0.0 0.0 0.0 0 0.805462187404089 1.3010299956639813 0.0 0.4247425010840047 + NPSMPQ 6.608 + + 133 + 1 2.505 44740.0 1.0 1899 4204 6103 HBL1_DMSO_200M_050219_2,6105 HBL1_DMSO_200M_050219_2,6105,NPSMPQRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6106 31.934 251.0 450280.0 25 0 169530.0 -1 0 79 410.17472896225854 409.16745249565855 1 410.1735107302666 MULTI CID FTMS 0 0 0 6103 127119.375 0.0232989843301096 23 -0.6740875244140625 3 4 MPY 3 -1 + 51.414 0.0 0.0 12.566 12.566 98.73 0.0 0.0 0.0 33.96713777483761 10.713337517843655 10.713337517843655 31.22486274231747 0 0.4247425010840047 2.0 0.0 0.0 MPY;{NN|[MP]|[D{I|L}]|[EV]}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F} 12.566;4.9343;2.7927 -;-;- 12 + 1 2.505 95060.3 1.0 1900 4204 6103 HBL1_DMSO_200M_050219_2,6106 HBL1_DMSO_200M_050219_2,6106, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6107 31.944 528.0 116520.0 25 0 4055.2 + 13702 HQISQQTQL 9 106 541.7822999164624 1081.5500468997247 2 541.7824584841728 MULTI CID FTMS 0 0 0 6103 111314.5546875 0.6598525918001584 -3 0.1202812194824218 4 Unmodified _HQISQQTQL_ ENSG00000135870|ENST00000367696|RC3H1;nc|ENSG00000135870|Q5TC82-2|RC3H1 53.832793166522166 0.0319663582346103 4 [AG]{I|L}HSQQTQ{I|L} 10 3 + 73.013 0.0 0.0 6.7508 6.7508 80.526 0.0 0.0 0.0 14.49092531119419 6.319459175083608 6.319459175083608 3.0102999566398125 0 0.8424778212679485 2.0 1.174742501084005 0.4247425010840047 [AG]{I|L}HSQQTQ{I|L};[AG]H{I|L}SQQTQ{I|L};[AG]{I|L}HS[AG]QTQ{I|L};[AG]{I|L}HSQ[AG]TQ{I|L};[AG]H{I|L}SQ[AG]TQ{I|L};[AG]H{I|L}S[AG]QTQ{I|L};[Q{I|L}]HSQQTQ{I|L};[HQ]{I|L}SQQTQ{I|L};[AG]T[HV]QQTQ{I|L};[AG]{I|L}HS[AG][AG]TQ{I|L} 6.7508;6.4725;5.9034;5.9034;5.6251;5.6251;5.411;5.3231;5.0619;4.6667 -;-;-;-;-;-;-;+;-;- + 505 1 2.505 54390.4 1.0 1901 4204 6103 HBL1_DMSO_200M_050219_2,6107 HBL1_DMSO_200M_050219_2,6107,HQISQQTQL True True HQISQQTQL 31.943621 541.782458484173 1171084.375 6103.0 nc|ENSG00000135870|Q5TC82-2|RC3H1;;ENSG00000135870|ENST00000367696|RC3H1 6.90462605158488 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6108 31.955 647.0 265370.0 25 0 85415.0 -1 0 141 406.224831858581 405.217555391981 1 406.2247192263603 MULTI CID FTMS 0 0 0 6103 114932.53125 0.1066037903198878 -10 0.3783817291259765 5 4 PAV 3 -1 18.416 0.0 0.0 4.5448 0.0 0.0 120.0487759503779 0.0 120.0487759503779 0.0 5.642714304385628 0.0 0.0 0 0.0 0.0 0.0 0.0 PAV 4.5448 - 36 + 1 2.505 139247.2 1.0 1902 4204 6103 HBL1_DMSO_200M_050219_2,6108 HBL1_DMSO_200M_050219_2,6108, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6110 31.959 29.0 1839000.0 25 0 151850.0 + 3655 DAEMTTRMV 9 96 535.2355215928542 1068.4564902525085 2 535.2359496951103 MULTI CID FTMS 0 0 0 6109 1857060.875 0.988341991575552 8 -0.2268257141113281 1 Oxidation (M) _DAEM(Oxidation (M))TTRMV_ ENSG00000205220|ENST00000358514|PSMB10 53.832793166522166 0.0319663582346103 4 {[DA]|[EG]}E{M(Oxidation (M))|F}TTRMV 9 0 + 78.479 0.0 0.0 7.345 7.345 92.886 0.0 0.0 0.0 59.01464500711288 10.088422267289118 10.088422267289118 13.762874945799751 0 0.8494850021680094 2.0 1.055462187404089 0.0 + + {[DA]|[EG]}E{M(Oxidation (M))|F}TTRMV;{[DA]|[EG]}{M(Oxidation (M))|F}ETTRMV;{[DA]|[EG]}E{M(Oxidation (M))|F}[VP][HT][PG];[{M(Oxidation (M))|F}T]RTTEEW;{[CT]|[{M(Oxidation (M))|F}G]}EETTRMV;W{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PS]RMV;[{M(Oxidation (M))|F}T]RTTE[PS]M;{[DA]|[EG]}{M(Oxidation (M))|F}E[VP][HT][PG];[{M(Oxidation (M))|F}T]RTT[DP][EC];[{M(Oxidation (M))|F}T]RT[PS]E[EC] 7.345;6.0569;3.4849;3.1973;2.8289;2.7759;2.7029;2.1968;2.0749;1.7186 +;-;-;-;-;-;-;-;-;- + 225 + 1 2.481 46065.3 1.0 1903 4205 6109 HBL1_DMSO_200M_050219_2,6110 HBL1_DMSO_200M_050219_2,6110,DAEMTTRMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6111 31.972 732.0 238170.0 25 0 11585.0 + 2459 AQVTVRPKM 9 196 343.8672964483451 1028.5800599452352 3 343.8666564822197 MULTI CID FTMS 0 0 0 6109 134125.5 1.0 0 0.0 2 Unmodified _AQVTVRPKM_ ENST00000354911.8_2_10:28822518-28879725:+|nuORF 22.65808497894818 0.2428932432760099 4 [QA]VTV 5 4 29.916 0.0 0.0 2.9084 0.0 0.0 0.0 527.2778604096619 527.2778604096619 12.864132832946744 0.0 0.0 0.0 0 0.3494850021680094 0.4202164033831898 0.0 0.0 + [QA]VTV 2.9084 + + 274 + 1 2.481 143748.5 1.0 1904 4205 6109 HBL1_DMSO_200M_050219_2,6111 HBL1_DMSO_200M_050219_2,6111,AQVTVRPKM False True AQVTVRPKM 31.971917 343.86665648222 2218250.5 6109.0 ENST00000354911.8_2_10:28822518-28879725:+|nuORF 7.17327864964803 3.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6112 31.986 800.0 123350.0 25 0 8900.5 + 23666 LTRSSGGS 8 132 382.69992211460976 0 382.6997863650322 PEAK CID FTMS 0 0 0 6109 107714.0390625 0.930457665091586 -4 0.1628990173339843 3 Unmodified _LTRSSGGS_ REV__ENSG00000149115|ENST00000358252|TNKS1BP1;REV__ENST00000528882.5_1_11:57067274-57087552:-|nuORF;REV__nc|ENSG00000149115|Q9C0C2-2|TNKS1BP1 10.823927491677226 0.5322985476678564 4 EYRE 4 -1 16.5 0.0 0.0 2.1615 0.0 0.0 101.0476580946508 82.06686578922108 183.11452388387187 0.0 0.0 0.0 0.0 0 1.2259463536633983 0.0 0.3252574989159953 0.0 EYRE 2.1615 - 50 + 1 2.481 78106.7 0.449999988079071 1905 4205 6109 HBL1_DMSO_200M_050219_2,6112 HBL1_DMSO_200M_050219_2,6112,LTRSSGGS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6114 32.004 800.0 72253.0 25 0 4041.5 -1 0 97 630.2667385918311 629.259462125231 1 630.2657958865166 MULTI CID FTMS 0 0 0 6113 119388.6484375 0.9422913165079568 1 -0.045989990234375 1 4 {[QG]|[NA]}E 3 -1 18.905 0.0 0.0 3.0043 0.0 0.0 0.0 312.11331889696856 312.11331889696856 2.4508859305759394 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.3252574989159953 0.2887254899964357 {[QG]|[NA]}E 3.0043 - 130 1 2.481 48183.2 0.5400000214576721 1906 4206 6113 HBL1_DMSO_200M_050219_2,6114 HBL1_DMSO_200M_050219_2,6114, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6115 32.018 800.0 127590.0 25 0 15477.0 + 36453 SYYSSGSRASM 11 102 598.2546863963391 1194.4948198594782 2 598.2551147341728 MULTI CID FTMS 0 0 0 6113 94846.671875 0.3169563499282458 -5 0.193695068359375 2 Unmodified _SYYSSGSRASM_ ENST00000515481.5_1_5:179041844-179042012:-|nuORF 35.61225514009592 0.279986979807413 4 {[{M(Oxidation (M))|F}C]|[YS]}YSSGWKSM 10 3 + 50.487 0.0 0.0 4.2266 4.2266 77.641 0.0 0.0 0.0 36.50723641296437 10.916695755154391 10.916695755154391 9.164539485499256 0 0.805462187404089 0.0 0.8494850021680094 0.3494850021680094 {[{M(Oxidation (M))|F}C]|[YS]}YSSGWKSM;{[{M(Oxidation (M))|F}C]|[YS]}YSSG{[DA]|[EG]}KSM;{[{M(Oxidation (M))|F}C]|[YS]}YSSGT{[NV]|[RG]}SM;{[{M(Oxidation (M))|F}C]|[YS]}YS[RN]AM{[CT]|[{M(Oxidation (M))|F}G]};{[{M(Oxidation (M))|F}C]|[YS]}YS[RN]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M;[HT][NP]TGSSY[MT];[MT][KC][KC]SY[MT];[HM][MT]SGWKSM;[HM][MT]SGT{[NV]|[RG]}SM 4.2266;3.4594;3.3297;2.8343;2.6552;2.2909;1.6073;1.2975;0.40062 -;-;-;-;-;-;-;-;- 269 + 1 2.481 80152.5 0.5 1907 4206 6113 HBL1_DMSO_200M_050219_2,6115 HBL1_DMSO_200M_050219_2,6115,SYYSSGSRASM False True SYYSSGSRASM 32.017931 598.255114734173 3307571.75 6113.0 ENST00000515481.5_1_5:179041844-179042012:-|nuORF 8.696444829305014 2.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6116 32.032 800.0 29690.0 25 0 3804.1 -1 0 39 1125.1120163939088 3372.3142197819266 3 1126.112353503704 MULTI CID FTMS 0 0 0 6113 61881.8671875 1.0 0 0.0 3 4 M 1 -1 3.0989 0.0 0.0 0.091894 0.0 0.0 3007.181930547472 231.0640810602172 3238.246011607689 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.091894 - 3 + 1 2.481 29255.0 0.4000000059604645 1908 4206 6113 HBL1_DMSO_200M_050219_2,6116 HBL1_DMSO_200M_050219_2,6116, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6118 32.038 165.0 483720.0 25 0 111620.0 + 13188 HGFSPRTV 8 71 450.7369548031176 899.4593566730352 2 450.7368347048759 MULTI CID FTMS 0 0 0 6117 654287.5625 0.97317878763089 1 -0.0563240051269531 1 Unmodified _HGFSPRTV_ ENST00000494664.5_1_3:119217469-119217535:+|nuORF 52.268347100219714 0.1285778651304833 4 HG{M(Oxidation (M))|F}S[RP]TV 8 0 + 68.607 0.0 0.0 7.6276 7.6276 95.567 0.0 0.0 0.0 47.63805019828801 7.19273760456403 7.19273760456403 30.51152522447381 0 1.575257498915995 1.5228787452803376 0.0 0.25 + + HG{M(Oxidation (M))|F}S[RP]TV;HGKK{[QC]|[C(Carbamidomethyl (C))A]}TV;HGKK[YN][PG];H[YQ][RP]TV;HV[{I|L}T]{[QC]|[C(Carbamidomethyl (C))A]}TV;VH[{I|L}T]{[QC]|[C(Carbamidomethyl (C))A]}TV 7.6276;4.2354;2.871;2.4438;1.6517;0.95543 +;-;-;-;-;- + 135 + 1 2.449 66797.5 1.0 1909 4207 6117 HBL1_DMSO_200M_050219_2,6118 HBL1_DMSO_200M_050219_2,6118,HGFSPRTV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6119 32.052 800.0 210770.0 25 0 16764.0 -1 0 78 832.7122452689769 2495.1149064071305 3 833.0469848513603 MULTI CID FTMS 0 0 0 6117 226591.421875 1.0 0 0.0 2 4 N 1 -1 11.99 0.0 0.0 0.48053 0.0 0.0 728.3374878038829 1649.7243959537514 2378.0618837576344 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 N 0.48053 - 25 + 1 2.449 122024.7 0.6600000262260437 1910 4207 6117 HBL1_DMSO_200M_050219_2,6119 HBL1_DMSO_200M_050219_2,6119, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6120 32.066 800.0 238240.0 25 0 38813.0 + 6098 DSRPQLRSV 9 140 529.2902573734862 1056.5659618137722 2 529.2911865115166 MULTI CID FTMS 0 0 0 6117 149025.734375 0.2405007997994021 -8 0.3371753692626953 3 Unmodified _DSRPQLRSV_ ENSG00000063241|ENST00000425675|ISOC2;ENST00000591718.1_1_19:55966993-55972941:-|nuORF;nc|ENSG00000063241|Q96AB3-2|ISOC2 30.7034409873982 0.1405282614900322 4 VD[RP]QTRSV 9 3 + 31.864 0.0 0.0 3.0158 3.0158 62.768 0.0 0.0 0.0 7.917112166456462 1.2293664832659807 1.2293664832659807 0.796896906561031 0 1.035666875892183 0.619788758288394 0.5356668758921829 0.0 VD[RP]QTRSV;DV[RP]QTRSV;{[QD]|[EN]|[WG]|[KD]|[RS]}D[QP]{I|L}RSV;{[DS]|[MA]|[CV]|TT}R[QP]{I|L}RSV;{[DS]|[MA]|[CV]|TT}R[QP]{I|L}[VG]W;VD[RP]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PA];DV[RP]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PA] 3.0158;2.9404;2.3963;2.1918;1.0151;0.58198;0.50656 -;-;-;+;-;-;- + 418 + 1 2.449 148504.0 0.6800000071525574 1911 4207 6117 HBL1_DMSO_200M_050219_2,6120 HBL1_DMSO_200M_050219_2,6120,DSRPQLRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6121 32.08 800.0 192410.0 25 0 27602.0 -1 0 119 462.1455257938485 461.1382493272485 1 462.1456176638603 MULTI CID FTMS 0 0 0 6117 131311.90625 0.6194463242247138 -4 0.1606769561767578 4 4 V 1 -1 10.837 0.0 0.0 2.3502 0.0 0.0 344.05898557168047 0.0 344.05898557168047 0.0 0.4588518667782271 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.3502 - 20 + 1 2.449 121570.4 0.6200000047683716 1912 4207 6117 HBL1_DMSO_200M_050219_2,6121 HBL1_DMSO_200M_050219_2,6121, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6122 32.088 474.0 415240.0 25 0 34162.0 + + -1 KLWKGARSV 9 197 348.8808816501187 1043.620815550556 3 349.2142822146416 MULTI CID FTMS 0 0 0 6117 140295.875 1.0 0 0.0 5 Carbamidomethyl (C) _KLWLLC(Carbamidomethyl (C))VI_ nc|ENSG00000024048|Q8IWV8|UBR2;nc|ENSG00000024048|Q8IWV8-2|UBR2;ENSG00000024048|ENST00000372901|UBR2 15.847184025352805 0.6768015514314958 4 W{I|L}KKG 5 -1 56.242 0.0 0.0 5.3891 0.0 0.0 0.0 428.225790765126 428.225790765126 33.46999337258652 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 W{I|L}KKG 5.3891 - 557 + 1 2.449 159238.1 1.0 1913 4207 6117 HBL1_DMSO_200M_050219_2,6122 HBL1_DMSO_200M_050219_2,6122,KLWLLCVI False False KLWKGARSV 32.088156 348.8803 1513903.5 6117.0 nc|ENSG00000024048|Q8IWV8|UBR2;;nc|ENSG00000024048|Q8IWV8-2|UBR2;;ENSG00000024048|ENST00000372901|UBR2 3.392783522605896 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6124 32.092 9.6 4998900.0 25 0 764940.0 + 11225 GEPREGEI 8 70 443.7160275990602 885.4175022649205 2 443.7158996462822 MULTI CID FTMS 0 0 0 6123 7539178.0 0.9137097892802764 -1 0.0563240051269531 1 Unmodified _GEPREGEI_ REV__ENST00000557806.5_1_14:24641555-24641950:+|nuORF 24.99096001346401 0.5185035129578945 4 {[DA]|[EG]}PREGE{I|L} 8 -1 + 63.945 0.0 0.0 7.222 7.222 82.007 0.0 0.0 0.0 28.19984993812689 23.49993446776488 23.49993446776488 3.0102999566398125 0 1.1549471895720984 2.0 0.0 0.0 {[DA]|[EG]}PREGE{I|L};{[DA]|[EG]}PRADE{I|L};{[DA]|[EG]}E[RP]GE{I|L};[RP]{[DA]|[EG]}EGE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}H]|[RQ]}GE{I|L};[VP]{[QD]|[EN]|[WG]|[KD]|[RS]}EGE{I|L};[RP]{[DA]|[EG]}ADE{I|L};{[QN]|[E{I|L}]|[KN]}YYGE{I|L};[VP]{[QD]|[EN]|[WG]|[KD]|[RS]}ADE{I|L};[VP]{[QD]|[EN]|[WG]|[KD]|[RS]}EW{I|L} 7.222;6.8821;5.9579;3.745;3.7049;3.6394;3.405;3.3649;3.2994;2.9154 +;-;-;-;-;-;-;-;-;- + 92 1 2.449 40910.8 1.0 1914 4208 6123 HBL1_DMSO_200M_050219_2,6124 HBL1_DMSO_200M_050219_2,6124,GEPREGEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6125 32.093 10.0 5767000.0 25 0 973450.0 + 24268 MAPPPPRSV 9 58 476.256952162498 950.499351391796 2 476.2565795779228 MULTI CID FTMS 0 0 0 6123 7068297.0 0.9313914348003977 -4 0.1757278442382812 2 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 4 {[DS]|[MA]|[CV]|TT}PPP 5 4 43.015 0.0 0.0 4.5256 0.0 0.0 0.0 454.2414950006469 454.2414950006469 38.41129063296272 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {[DS]|[MA]|[CV]|TT}PPP 4.5256 + + 18 + 1 2.449 52368.5 1.0 1915 4208 6123 HBL1_DMSO_200M_050219_2,6125 HBL1_DMSO_200M_050219_2,6125,MAPPPPRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6126 32.095 36.0 1868200.0 25 0 218980.0 + 21983 LPPPAAKTV 9 82 447.2761269222121 892.5377009112242 2 447.2754089236259 MULTI CID FTMS 0 0 0 6123 2218902.25 0.6028521133050555 25 -0.6623878479003906 3 Unmodified _LPPPAAKTV_ ENSG00000168894|ENST00000306368|RNF181;ENST00000461845.1_1_2:85822886-85823939:+|nuORF 31.26834338654808 0.1333407332142048 4 {I|L}PPP 4 5 55.79 0.0 0.0 6.2507 0.0 0.0 0.0 485.2717074029906 485.2717074029906 48.80001899740286 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + {I|L}PPP 6.2507 + + 64 + 1 2.449 57402.0 1.0 1916 4208 6123 HBL1_DMSO_200M_050219_2,6126 HBL1_DMSO_200M_050219_2,6126,LPPPAAKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6128 32.101 179.0 257580.0 25 0 33639.0 + 16535 KAVETVHNL 9 88 505.7840294599224 1009.5535059866448 2 505.7834045290947 MULTI CID FTMS 0 0 0 6127 258331.859375 0.6711335868176055 2 -0.06268310546875 1 Unmodified _KAVETVHNL_ ENSG00000101158|ENST00000652272|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;ENST00000478389.5_1_20:57566845-57568278:+|nuORF;nc|ENSG00000101158|Q8IXH7|NELFCD 36.506200033944 0.094635877243972 4 [KA]{NN|[MP]|[D{I|L}]|[EV]}TVH{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 28.368 0.0 0.0 2.8099 2.8099 78.673 0.0 0.0 0.0 13.31810284277936 11.02889897491746 11.02889897491746 24.717262228329563 0 1.305462187404089 0.0 0.0 0.7742275032520141 + + [KA]{NN|[MP]|[D{I|L}]|[EV]}TVH{[QV]|[N{I|L}]|[RA]|[KV]};[HN][WK]AK{[QV]|[N{I|L}]|[RA]|[KV]} 2.8099;0.36157 +;- + 75 + 1 2.413 40213.0 1.0 1917 4209 6127 HBL1_DMSO_200M_050219_2,6128 HBL1_DMSO_200M_050219_2,6128,KAVETVHNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6129 32.115 800.0 208250.0 25 0 12987.0 -1 MAPPPPRSV 9 140 484.25449292526935 966.4944329173388 2 484.2534667849541 MULTI CID FTMS 0 0 0 6127 202384.53125 1.0 0 0.0 2 Oxidation (M) _M(Oxidation (M))APPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 20.41453444215458 0.284085796332423 4 PPPAE 5 -1 42.367 0.0 0.0 4.3836 0.0 0.0 457.2661610334 0.0 457.2661610334 0.0 32.18589245140191 0.0 0.0 0 0.8633643341304672 0.0 0.0 0.0 PPPAE 4.3836 - 183 1 2.413 131839.8 0.75 1918 4209 6127 HBL1_DMSO_200M_050219_2,6129 HBL1_DMSO_200M_050219_2,6129,MAPPPPRSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6130 32.117 105.0 563720.0 25 0 58671.0 26747 PAAKGPGA 8 81 334.6900910434866 667.3656291537732 2 334.6893188357353 MULTI CID FTMS 0 0 0 6127 437615.8125 0.0484677997599069 9 -0.2127876281738281 3 Unmodified _PAAKGPGA_ ENSG00000164853|ENST00000316333|UNCX 0.6903765706972694 0.8201419426409876 4 [HN]T{I|L}{I|L}A 6 7 + 38.573 0.0 0.0 5.7798 5.7798 82.575 0.0 0.0 0.0 13.78022170376731 23.058356021749027 13.78022170376731 7.625305739907809 0 0.0 0.0 0.2396518287104437 0.7302046884880937 [HN]T{I|L}{I|L}A;[HN]{I|L}T{I|L}A;[HT]N{I|L}{I|L}A;[HT]{I|L}N{I|L}A;[HT]GG{I|L}{I|L}A;[HT]{I|L}GG{I|L}A 5.7798;4.6372;3.5598;3.235;1.5118;1.187 -;-;-;-;-;- 45 1 2.413 50899.6 1.0 1919 4209 6127 HBL1_DMSO_200M_050219_2,6130 HBL1_DMSO_200M_050219_2,6130,PAAKGPGA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6131 32.131 800.0 158290.0 25 0 31049.0 -1 0 68 853.1917586308205 0 853.1922485232353 PEAK CID FTMS 0 0 0 6127 144399.953125 0.6132796563042084 -1 0.0064659118652343 4 4 Q 1 -1 3.4949 0.0 0.0 0.20505 0.0 0.0 1258.2614947012908 315.0221041315063 1573.283598832797 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.20505 - 12 + 1 2.413 89505.7 0.75 1920 4209 6127 HBL1_DMSO_200M_050219_2,6131 HBL1_DMSO_200M_050219_2,6131, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6133 32.135 20.0 2707100.0 25 0 284990.0 + 13136 HFIEKAHTL 9 91 365.8692653838752 1094.5859667518257 3 365.8690063357353 MULTI CID FTMS 0 0 0 6132 2599303.5 0.7833196504463745 -5 0.1761207580566406 1 Unmodified _HFIEKAHTL_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19762333-19763700:-|nuORF;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 53.31671820480216 0.0330978755772958 4 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EKAHT{I|L} 9 0 + 68.096 0.0 0.0 6.2211 6.2211 87.176 0.0 0.0 0.0 15.611879966701316 16.478174818886373 15.611879966701316 9.25846205488881 0 1.2231975075880328 1.6989700043360187 0.0 0.0 + + {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EKAHT{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}RKEHE{I|L};[{I|L}T]HN{I|L}{M(Oxidation (M))|F}HT{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}R{[RE]|[WV]}HT{I|L};[HA]KE{I|L}{M(Oxidation (M))|F}HT{I|L};[{I|L}T]HGG{I|L}{M(Oxidation (M))|F}HT{I|L};[HT]{I|L}N{I|L}{M(Oxidation (M))|F}HT{I|L};[{I|L}A][HT][VG]{M(Oxidation (M))|F}HT{I|L};[{I|L}T]HA[VG]{M(Oxidation (M))|F}HT{I|L};[HA]T[VG]{I|L}{M(Oxidation (M))|F}HT{I|L} 6.2211;5.3753;4.7948;4.2408;4.0076;3.9536;3.9191;3.8835;3.7927;3.2193 +;-;-;-;-;-;-;-;-;- + 851 1 2.413 48098.2 1.0 1921 4210 6132 HBL1_DMSO_200M_050219_2,6133 HBL1_DMSO_200M_050219_2,6133,HFIEKAHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6134 32.137 91.0 977180.0 25 0 118820.0 -1 0 35 624.7853458172015 2495.1122774024057 4 624.7857543826103 MULTI CID FTMS 0 0 0 6132 518746.1875 0.337761198147883 5 -0.0926666259765625 2 4 D 1 -1 21.237 0.0 0.0 0.85115 0.0 0.0 1651.747725269444 725.3135179277731 2377.0612431972168 0.0 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 D 0.85115 - 5 + 1 2.413 71073.1 1.0 1922 4210 6132 HBL1_DMSO_200M_050219_2,6134 HBL1_DMSO_200M_050219_2,6134, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6135 32.139 67.0 795560.0 25 0 116780.0 -1 0 36 500.0300990391136 2495.114112862568 5 500.0291931033134 MULTI CID FTMS 0 0 0 6132 807209.125 0.6745844691885857 6 -0.1248588562011718 3 4 D 1 -1 11.99 0.0 0.0 0.48053 0.0 0.0 843.3636956299184 1533.6992395831096 2377.062935213028 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 D 0.48053 - 3 + 1 2.413 48597.3 1.0 1923 4210 6132 HBL1_DMSO_200M_050219_2,6135 HBL1_DMSO_200M_050219_2,6135, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6136 32.141 82.0 514830.0 25 0 67530.0 + 4860 DGAPPPNQI 9 80 454.7266376347831 907.4387223363664 2 454.7260925173759 MULTI CID FTMS 0 0 0 6132 794952.4375 0.7438508162379717 -3 0.099334716796875 4 Unmodified _DGAPPPNQI_ ENSG00000184007|ENST00000647444|PTP4A2;ENST00000532001.6_1_1:32374455-32378590:-|nuORF;nc|ENSG00000184007|Q12974-3|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2 41.95555342248728 0.0647214845423414 4 [DG]APP{I|L}P{[QN]|[E{I|L}]|[KN]} 9 2 + 46.136 0.0 0.0 5.0842 5.0842 73.18 0.0 0.0 0.0 16.2101498947667 3.679359654502399 3.679359654502399 2.786144654057665 0 1.3494850021680094 1.3979400086720375 0.0 0.0 [DG]APP{I|L}P{[QN]|[E{I|L}]|[KN]};[DG]AP{I|L}PP{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}PP{I|L}P{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}PP{[QN]|[E{I|L}]|[KN]};[NP]EP{I|L}P{[QN]|[E{I|L}]|[KN]};[NP]E{I|L}PP{[QN]|[E{I|L}]|[KN]};[NP]PE{I|L}P{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}[KQ][YN]{I|L};{[HG]|PP}NE{I|L}P{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PAA[YN]{I|L} 5.0842;4.7772;3.2979;2.9908;2.0426;1.7355;1.3804;1.1353;0.93713;0.043128 -;-;-;-;-;-;-;-;-;- 186 1 2.413 40798.3 1.0 1924 4210 6132 HBL1_DMSO_200M_050219_2,6136 HBL1_DMSO_200M_050219_2,6136,DGAPPPNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6137 32.143 135.0 374560.0 25 0 60271.0 36645 TATRPITKM 9 77 509.7887012598336 1017.5628495864672 2 509.7881042361259 MULTI CID FTMS 0 0 0 6132 569120.6875 0.187007658459078 9 -0.21063232421875 5 Unmodified _TATRPITKM_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 23.78978130925829 0.2284941198415988 4 TMK 3 7 44.693 0.0 0.0 4.3921 0.0 0.0 639.3721843937242 0.0 639.3721843937242 0.0 23.26606256887672 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 TMK 4.3921 - 94 1 2.413 45184.2 1.0 1925 4210 6132 HBL1_DMSO_200M_050219_2,6137 HBL1_DMSO_200M_050219_2,6137,TATRPITKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6138 32.157 800.0 260070.0 25 0 44337.0 + 21599 LPKPPGRGV 9 139 460.78720631801633 919.5598597028328 2 460.7860595583916 MULTI CID FTMS 0 0 0 6132 179987.046875 0.1446149380305502 -31 1.058359146118164 6 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 32.30548876998284 0.1201446275138228 4 {I|L}PKPN 5 5 61.019 0.0 0.0 6.6356 0.0 0.0 0.0 367.1978853815063 367.1978853815063 50.181051057097605 0.0 0.0 0.0 0 1.035666875892183 1.6989700043360187 0.0 0.3494850021680094 {I|L}PKPN 6.6356 - 254 + 1 2.413 162155.6 0.9100000262260436 1926 4210 6132 HBL1_DMSO_200M_050219_2,6138 HBL1_DMSO_200M_050219_2,6138,LPKPPGRGV True True LPKPPGRGV 32.157311 460.786059558392 87818576.0 6132.0 nc|ENSG00000182325|Q8N531-2|FBXL6;;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;;ENSG00000182325|ENST00000331890|FBXL6 3.5225925842920938 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6140 32.161 15.0 2342400.0 25 0 204400.0 + -1 QCSSQDYPC 9 70 544.194600326848 1086.374647720496 2 544.1951171755791 MULTI CID FTMS 0 0 0 6139 3898312.25 0.9151640132244458 -1 0.0261383056640625 1 Carbamidomethyl (C) _QC(Carbamidomethyl (C))SSQDYPC_ REV__ENSG00000198797|ENST00000361539|BRINP2;REV__ENST00000478325.1_1_1:177226076-177250661:+|nuORF;REV__nc|ENSG00000198797|Q9C0B6-2|BRINP2 10.823927491677226 0.5436922275383211 4 MSN 3 -1 20.234 0.0 0.0 1.8625 0.0 0.0 357.0978055347521 394.1362703912719 751.234075926024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.3807196863200844 MSN 1.8625 - 183 + 1 2.413 35302.5 1.0 1927 4211 6139 HBL1_DMSO_200M_050219_2,6140 HBL1_DMSO_200M_050219_2,6140,QCSSQDYPC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6141 32.163 70.0 1259700.0 25 0 166680.0 + 27511 PKLPPRGVG 9 62 307.5275544155195 919.5608338467584 3 307.5266296267509 MULTI CID FTMS 0 0 0 6139 977341.9375 0.1610115993228676 -29 0.950420379638672 2 Unmodified _PKLPPRGVG_ ENSG00000169184|ENST00000302326|MN1 6.723162845929126 0.6799819581413107 4 {I|L}[KP]PP 5 6 20.713 0.0 0.0 2.2525 0.0 0.0 0.0 384.19953333072505 384.19953333072505 15.228787452803374 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}[KP]PP 2.2525 - 23 + 1 2.413 75583.1 1.0 1928 4211 6139 HBL1_DMSO_200M_050219_2,6141 HBL1_DMSO_200M_050219_2,6141,PKLPPRGVG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6143 32.167 61.0 1016400.0 25 0 123660.0 34486 SMLSFSDVAI 10 93 535.2661426483654 1068.5177323635307 2 535.2661620974541 MULTI CID FTMS 0 0 0 6142 786822.6875 0.5960794869682395 4 -0.0929489135742187 1 Unmodified _SMLSFSDVAI_ ENSG00000187918|ENST00000641930|OR51I2 15.847184025352805 0.5816416552707754 4 T{M(Oxidation (M))|F}[PS]{I|L} 5 7 25.502 0.0 0.0 2.3867 0.0 0.0 505.268846580275 0.0 505.268846580275 0.0 1.064921830680703 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 T{M(Oxidation (M))|F}[PS]{I|L} 2.3867 - 132 1 2.413 52444.7 1.0 1929 4212 6142 HBL1_DMSO_200M_050219_2,6143 HBL1_DMSO_200M_050219_2,6143,SMLSFSDVAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6144 32.18 746.0 337430.0 25 0 21719.0 + 35762 SVIKELRKA 9 174 522.3308274900181 1042.6471020468362 2 522.3309814333916 MULTI CID FTMS 0 0 0 6142 127334.9140625 0.2473274640729653 -4 0.074920654296875 2 Unmodified _SVIKELRKA_ ENSG00000204899|ENST00000377818|MZT1 47.7319792270244 0.0453426645642791 4 SV{I|L}KE{I|L}RKA 9 0 + 76.752 0.0 0.0 7.3613 7.3613 96.052 0.0 0.0 0.0 56.21928830545253 9.848299496535972 9.848299496535972 74.53840319068323 0 1.587180496500464 1.6989700043360187 0.2887254899964357 0.7392577316517049 + + SV{I|L}KE{I|L}RKA;[K{I|L}]{[RE]|[WV]}{[TV]|[{I|L}S]}VKA;[K{I|L}]{[RE]|[WV]}K{I|L}[VS]A 7.3613;0.2123;0.035393 +;-;- + 282 + 1 2.413 194389.6 1.0 1930 4212 6142 HBL1_DMSO_200M_050219_2,6144 HBL1_DMSO_200M_050219_2,6144,SVIKELRKA True True SVIKELRKA 32.180134 522.330981433392 2653577.25 6142.0 ENSG00000204899|ENST00000377818|MZT1 0.2189391454060872 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6145 32.182 76.0 807840.0 25 0 43867.0 + 6100 DSRPQLRSV 9 97 353.19603947070806 1056.5662890123242 3 353.1957275271416 MULTI CID FTMS 0 0 0 6142 805413.125 0.8244840069126442 -1 0.0057716369628906 3 Unmodified _DSRPQLRSV_ ENSG00000063241|ENST00000425675|ISOC2;ENST00000591718.1_1_19:55966993-55972941:-|nuORF;nc|ENSG00000063241|Q96AB3-2|ISOC2 45.739877483867886 0.0497104363764649 4 DSRPQ{I|L} 6 3 70.856 0.0 0.0 6.7063 0.0 0.0 0.0 357.1893402210652 357.1893402210652 54.61401446528966 0.0 0.0 0.0 0 0.5629529932484498 1.5228787452803376 0.0 1.424742501084005 + DSRPQ{I|L} 6.7063 + + 129 + 1 2.413 58130.4 1.0 1931 4212 6142 HBL1_DMSO_200M_050219_2,6145 HBL1_DMSO_200M_050219_2,6145,DSRPQLRSV True True DSRPQLRSV 32.18188 353.195727527142 8384944.75 6142.0 ENST00000591718.1_1_19:55966993-55972941:-|nuORF;;ENSG00000063241|ENST00000425675|ISOC2;;nc|ENSG00000063241|Q96AB3-2|ISOC2 4.350113073984782 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6147 32.186 13.0 3505100.0 25 0 624340.0 + 26137 NPSMPQRTV 9 69 515.25975250221 1028.5049520712198 2 515.2598144412041 MULTI CID FTMS 0 0 0 6146 4614583.0 0.7791344309006131 -3 0.0507049560546875 1 Unmodified _NPSMPQRTV_ ENSG00000197943|ENST00000564138|PLCG2 34.93206674587334 0.1032771302489716 4 [NP]SMPQ 6 3 46.471 0.0 0.0 4.5183 0.0 0.0 0.0 371.20441614322505 371.20441614322505 37.27507172544741 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + [NP]SMPQ 4.5183 + + 57 + 1 2.379 48224.6 1.0 1932 4213 6146 HBL1_DMSO_200M_050219_2,6147 HBL1_DMSO_200M_050219_2,6147,NPSMPQRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6148 32.2 800.0 137320.0 25 0 17570.0 -1 0 87 874.6409271897278 4368.168253615639 5 875.2422363162041 MULTI CID FTMS 0 0 0 -1 0 2 4 PGQ 3 -1 16.198 0.0 0.0 0.37082 0.0 0.0 2761.4019082851987 1321.6161234459526 4083.018031731152 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PGQ 0.37082 - 58 + 1 2.379 88324.6 0.7799999713897705 1933 4213 6146 HBL1_DMSO_200M_050219_2,6148 HBL1_DMSO_200M_050219_2,6148, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6149 32.214 800.0 119410.0 25 0 8674.6 + 14045 IAKQEDVSV 9 131 494.76815679127327 987.5217606493466 2 494.7676879763603 MULTI CID FTMS 0 0 0 6146 154276.625 0.920392601999178 3 -0.0741539001464843 3 Unmodified _IAKQEDVSV_ ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1 27.628801355627647 0.1796483985696185 4 [VS]{I|L}DV[RN]SV 9 7 + 44.042 0.0 0.0 4.4598 4.4598 83.102 0.0 0.0 0.0 22.34949910598236 14.09256854528806 14.09256854528806 21.095111605667284 0 0.5 1.5228787452803376 1.305462187404089 0.0 [VS]{I|L}DV[RN]SV;[VS]{I|L}DVQQTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[TV]|[{I|L}S]}{I|L}VW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[TV]|[{I|L}S]}V{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WR]A{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RRDVW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[W{I|L}]{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DV]KA{I|L}W;[KA]Q{[QN]|[E{I|L}]|[KN]}DVW;[VS]{I|L}DVQQS{I|L} 4.4598;2.3236;2.234;1.9292;1.8435;1.8435;1.7633;1.578;1.531;1.4893 -;-;-;-;-;-;-;-;-;- 450 + 1 2.379 77200.1 0.8799999952316284 1934 4213 6146 HBL1_DMSO_200M_050219_2,6149 HBL1_DMSO_200M_050219_2,6149,IAKQEDVSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6151 32.22 74.0 811030.0 25 0 89586.0 + 21862 LPPEQRQSI 9 80 534.2951098195646 1066.575666705929 2 534.2937499880791 MULTI CID FTMS 0 0 0 6150 522375.65625 0.3980009169533415 -22 0.7351837158203125 1 Unmodified _LPPEQRQSI_ ENSG00000101811|ENST00000372972|CSTF2;ENSG00000177613|ENST00000331173|CSTF2T;nc|ENSG00000101811|P33240-2|CSTF2 17.11289562659939 0.3734572693229295 4 {I|L}PPEP{I|L} 6 4 56.107 0.0 0.0 5.2605 0.0 0.0 0.0 417.1817721002563 417.1817721002563 42.1277502416482 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPEP{I|L} 5.2605 - 104 + 1 2.379 55691.4 1.0 1935 4214 6150 HBL1_DMSO_200M_050219_2,6151 HBL1_DMSO_200M_050219_2,6151,LPPEQRQSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6152 32.224 210.0 425400.0 25 0 44073.0 + 32615 SAYDNVNKV 9 108 505.2506821030496 1008.4868112728992 2 505.2498351931572 MULTI CID FTMS 0 0 0 6150 352761.8125 0.0659087669176907 -8 0.2278175354003906 2 Unmodified _SAYDNVNKV_ ENSG00000100030|ENST00000215832|MAPK1;nc|ENSG00000100030|P28482-2|MAPK1 47.74868867922204 0.0453060283459952 4 {[SA]|[TG]}YDNVNKV 9 0 + 71.307 0.0 0.0 7.0707 7.0707 89.654 0.0 0.0 0.0 53.68276045105476 8.59526940462149 8.59526940462149 9.208187539523747 0 0.6549471895720985 2.0 0.0 1.1382104921644451 + + {[SA]|[TG]}YDNVNKV;{[SA]|[TG]}YDGGVNKV;{[SA]|[TG]}YDNVGGKV;{[SA]|[TG]}YDGGVGGKV;{[SA]|[TG]}YDN[K{I|L}]QA;{[SA]|[TG]}YDGG[K{I|L}]QA;{[SA]|[TG]}YDN[K{I|L}][AG]A 7.0707;6.1577;6.1577;5.2489;4.5489;3.6359;3.3134 +;-;-;-;-;-;- + 534 + 1 2.379 72687.7 1.0 1936 4214 6150 HBL1_DMSO_200M_050219_2,6152 HBL1_DMSO_200M_050219_2,6152,SAYDNVNKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6154 32.229 188.0 209650.0 25 0 21556.0 + 21092 LPAGQNATV 9 72 435.73673663637777 869.4589203395556 2 435.7363464236259 MULTI CID FTMS 0 0 0 6153 168003.59375 0.7452523753718211 1 -0.0321922302246093 1 Unmodified _LPAGQNATV_ ENSG00000013503|ENST00000228347|POLR3B;nc|ENSG00000013503|Q9NW08-2|POLR3B 23.1484247019978 0.2366544122328345 4 [{I|L}P]QQNAS{I|L} 8 4 + 18.83 0.0 0.0 2.1657 2.1657 62.478 0.0 0.0 0.0 0.5719686320084385 3.3551586995424323 0.5719686320084385 1.3033376849500655 0 0.3935078169319297 1.2218487496163564 0.0 0.0 [{I|L}P]QQNAS{I|L};[{I|L}P]A{[QG]|[NA]}NAS{I|L};{[QG]|[NA]}[PA]{I|L}NAS{I|L};[PS][PG]KNAS{I|L};{[QG]|[NA]}[PA]N{I|L}AS{I|L};[PA]{[QG]|[NA]}{I|L}NAS{I|L};[PA]{[QG]|[NA]}N{I|L}AS{I|L};[PA]{I|L}{[QG]|[NA]}NAS{I|L} 2.1657;2.0158;0.99116;0.99116;0.90009;0.68195;0.59088;0.47942 -;-;-;-;-;-;-;- 76 1 2.379 38968.7 1.0 1937 4215 6153 HBL1_DMSO_200M_050219_2,6154 HBL1_DMSO_200M_050219_2,6154,LPAGQNATV False True LPAGQNATV 32.229319 435.736346423626 2448284.5 6153.0 ENSG00000013503|ENST00000228347|POLR3B;;nc|ENSG00000013503|Q9NW08-2|POLR3B 5.787629763285319 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6155 32.243 800.0 125040.0 25 0 27506.0 + 24736 MPDSDSASSDV 11 118 555.7158935279898 0 555.7159301638603 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _MPDSDSASSDV_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 9.38312468134398 0.4559597037863106 4 PHD 3 -1 16.198 0.0 0.0 1.46 0.0 0.0 113.95413973127354 643.2994238061108 757.2535635373844 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PHD 1.46 - 70 + 1 2.379 83396.5 0.7300000190734863 1938 4215 6153 HBL1_DMSO_200M_050219_2,6155 HBL1_DMSO_200M_050219_2,6155,MPDSDSASSDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6156 32.256 740.0 309620.0 25 0 18770.0 + 31487 RPYEKGRLI 9 157 377.892036347364 1130.6542796422918 3 377.8917724490166 MULTI CID FTMS 0 0 0 6153 298573.375 0.922425258663569 -1 0.0101737976074218 3 Unmodified _RPYEKGRLI_ ENSG00000086061|ENST00000330899|DNAJA1;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;nc|ENSG00000086061|P31689-2|DNAJA1 55.24861242081279 0.0288621114503864 4 RPYEK{[NV]|[RG]}{I|L}{I|L} 9 0 + 66.613 0.0 0.0 5.8915 5.8915 74.493 0.0 0.0 0.0 39.23564725985324 2.1220850904271344 2.1220850904271344 1.642078980768062 0 2.56295299324845 0.6777807052660807 0.4247425010840047 0.3807196863200844 + + RPYEK{[NV]|[RG]}{I|L}{I|L};RPYEK{I|L}{[NV]|[RG]}{I|L};RPYE{I|L}K{[NV]|[RG]}{I|L};{I|L}{I|L}[CS]EK{[NV]|[RG]}{I|L}{I|L};{I|L}{I|L}[CS]EK{I|L}{[NV]|[RG]}{I|L};{I|L}{I|L}[CS]E{I|L}K{[NV]|[RG]}{I|L};{I|L}[R{M(Oxidation (M))|F}]EK{[NV]|[RG]}{I|L}{I|L};{I|L}[R{M(Oxidation (M))|F}]EK{I|L}{[NV]|[RG]}{I|L};{I|L}[R{M(Oxidation (M))|F}]E{I|L}K{[NV]|[RG]}{I|L};[RP][{I|L}T]KT[CS]{I|L}{I|L} 5.8915;5.7463;5.3243;5.2862;5.141;4.719;4.5325;4.3873;3.9653;2.5831 +;-;-;-;-;-;-;-;-;- + 251 + 1 2.379 183325.6 1.0 1939 4215 6153 HBL1_DMSO_200M_050219_2,6156 HBL1_DMSO_200M_050219_2,6156,RPYEKGRLI True True RPYEKGRLI 32.255969 377.891772449017 5819901.5 6153.0 nc|ENSG00000086061|P31689-2|DNAJA1;;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;;ENSG00000086061|ENST00000330899|DNAJA1 7.146061261494954 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6158 32.274 800.0 230040.0 25 0 20759.0 + -1 SPRLVSLMTEE 11 168 426.55256946706646 1276.6358790013994 3 426.5521118044853 MULTI CID FTMS 0 0 0 6157 159405.4375 0.578427634943512 -6 0.1248588562011718 1 Oxidation (M) _SPRLVSLM(Oxidation (M))TEE_ REV__ENSG00000138688|ENST00000679879|BLTP1;REV__ENST00000482114.1_1_4:123130334-123145991:+|nuORF;REV__nc|ENSG00000138688|Q2LD37-2|BLTP1;REV__nc|ENSG00000138688|Q2LD37-4|BLTP1;REV__nc|ENSG00000138688|Q2LD37-5|BLTP1;REV__nc|ENSG00000138688|Q2LD37-6|BLTP1;REV__nc|ENSG00000138688|Q2LD37-7|BLTP1;REV__nc|ENSG00000138688|Q2LD37|BLTP1 8.28643447893445 0.836051997600898 4 [RV]{I|L}PSSA 7 -1 44.571 0.0 0.0 3.4913 0.0 0.0 0.0 563.2031757145431 563.2031757145431 32.096451073723706 0.0 0.0 0.0 0 1.8935078169319297 0.958607314841775 0.8494850021680094 0.1595680409956017 [RV]{I|L}PSSA 3.4913 - 404 1 2.379 143447.2 0.800000011920929 1940 4216 6157 HBL1_DMSO_200M_050219_2,6158 HBL1_DMSO_200M_050219_2,6158,SPRLVSLMTEE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6160 32.291 800.0 107410.0 25 0 8606.4 + 36454 SYYSSGSRASM 11 104 598.2546863963391 1194.4948198594782 2 598.2562133669853 MULTI CID FTMS 0 0 0 6159 65033.08984375 0.2173260313086834 6 -0.1966972351074218 1 Unmodified _SYYSSGSRASM_ ENST00000515481.5_1_5:179041844-179042012:-|nuORF 14.95716135407024 0.7240205813188479 4 SSY[MT] 5 8 31.58 0.0 0.0 2.6438 0.0 0.0 607.2752593568946 0.0 607.2752593568946 0.0 20.471062485323515 0.0 0.0 0 0.75 0.0 0.4247425010840047 0.0 SSY[MT] 2.6438 - 89 1 2.355 66666.5 0.6299999952316284 1941 4217 6159 HBL1_DMSO_200M_050219_2,6160 HBL1_DMSO_200M_050219_2,6160,SYYSSGSRASM False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6161 32.293 92.0 807120.0 25 0 157090.0 + 13635 HPRTSITV 8 75 455.75834558181776 909.5021382304355 2 455.7578918337822 MULTI CID FTMS 0 0 0 6159 830722.5 0.3140275149375917 -5 0.1112899780273437 2 Unmodified _HPRTSITV_ ENSG00000077348|ENST00000221233|EXOSC5;ENST00000593523.1_1_19:41897706-41903233:-|nuORF 37.97399986684836 0.2681860861828418 4 V{M(Oxidation (M))|F} 2 8 34.949 0.0 0.0 3.8426 0.0 0.0 0.0 660.3586405971149 660.3586405971149 4.726890629795548 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 V{M(Oxidation (M))|F} 3.8426 - 122 + 1 2.355 60222.3 1.0 1942 4217 6159 HBL1_DMSO_200M_050219_2,6161 HBL1_DMSO_200M_050219_2,6161,HPRTSITV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6162 32.307 800.0 158100.0 25 0 53003.0 + 32617 SAYDNVNKV 9 87 1009.4935329244014 1008.4862564578012 1 1009.570117175579 MULTI CID FTMS 0 0 0 -1 0 3 Unmodified _SAYDNVNKV_ ENSG00000100030|ENST00000215832|MAPK1;nc|ENSG00000100030|P28482-2|MAPK1 93.16586880292088 0.0136995152735431 4 NVNKV 5 4 65.988 0.0 0.0 6.5432 0.0 0.0 436.1605702130875 0.0 436.1605702130875 0.0 46.91962823435958 0.0 0.0 0 1.8252574989159955 0.0 0.0 1.7302046884880935 + NVNKV 6.5432 + + 737 1 2.355 87051.0 0.5899999737739563 1943 4217 6159 HBL1_DMSO_200M_050219_2,6162 HBL1_DMSO_200M_050219_2,6162,SAYDNVNKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6164 32.314 244.0 402890.0 25 0 85269.0 + 6099 DSRPQLRSV 9 85 529.2902573734862 1056.5659618137722 2 529.2901489138603 MULTI CID FTMS 0 0 0 6163 398558.84375 0.6432024716469372 3 -0.0802192687988281 1 Unmodified _DSRPQLRSV_ ENSG00000063241|ENST00000425675|ISOC2;ENST00000591718.1_1_19:55966993-55972941:-|nuORF;nc|ENSG00000063241|Q96AB3-2|ISOC2 12.240655878213236 0.5053430591993562 4 DV 2 7 20.969 0.0 0.0 1.9846 0.0 0.0 0.0 839.4484223097843 839.4484223097843 7.7815125038364386 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV 1.9846 - 48 + 1 2.355 80631.6 1.0 1944 4218 6163 HBL1_DMSO_200M_050219_2,6164 HBL1_DMSO_200M_050219_2,6164,DSRPQLRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6165 32.328 800.0 119840.0 25 0 21169.0 + 13189 HGFSPRTV 8 108 450.7369548031176 899.4593566730352 2 450.7373535037041 MULTI CID FTMS 0 0 0 6163 128521.4375 0.1911611100368871 12 -0.3721199035644531 2 Unmodified _HGFSPRTV_ ENST00000494664.5_1_3:119217469-119217535:+|nuORF 52.268347100219714 0.1285778651304833 4 HG{M(Oxidation (M))|F}S[RP]TV 8 0 + 58.846 0.0 0.0 6.5424 6.5424 84.386 0.0 0.0 0.0 27.914930551903225 6.462636538200158 6.462636538200158 6.462636538200158 0 1.3723637474483468 1.3010299956639813 0.2396518287104437 0.3252574989159953 + + HG{M(Oxidation (M))|F}S[RP]TV;HG{M(Oxidation (M))|F}S[RP]S{I|L};HG{M(Oxidation (M))|F}S[RV][TP];HGKK{[QC]|[C(Carbamidomethyl (C))A]}TV;HGKK{[QC]|[C(Carbamidomethyl (C))A]}S{I|L};HG[KQ]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AV;HG[RV]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP];VHT{I|L}{[QC]|[C(Carbamidomethyl (C))A]}TV;HG[KQ]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}G{I|L};HVT{I|L}{[QC]|[C(Carbamidomethyl (C))A]}TV 6.5424;5.8239;4.7962;3.6871;2.9686;2.7513;2.6102;2.0547;2.0328;1.8839 +;-;-;-;-;-;-;-;-;- + 254 + 1 2.355 77733.7 0.6100000143051147 1945 4218 6163 HBL1_DMSO_200M_050219_2,6165 HBL1_DMSO_200M_050219_2,6165,HGFSPRTV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6166 32.341 800.0 110640.0 25 0 8623.0 + -1 EGMYTGHGRM 10 119 577.7400718680508 1153.4655908029015 2 577.7412597537041 MULTI CID FTMS 0 0 0 6163 189146.765625 0.1104845130292835 -5 0.1255378723144531 3 Oxidation (M) _EGMYTGHGRM(Oxidation (M))_ REV__ENSG00000130713|ENST00000372358|EXOSC2;REV__ENST00000430138.6_1_9:133569178-133570981:+|nuORF;REV__ENST00000463488.1_1_9:133569202-133574940:+|nuORF;REV__ENST00000491115.6_1_9:133569178-133574746:+|nuORF;REV__nc|ENSG00000130713|Q13868-2|EXOSC2;REV__nc|ENSG00000130713|Q13868-3|EXOSC2 22.736283301280096 0.4578556481593033 4 {[DA]|[EG]}MQV{[CP]|[EA]}W 8 -1 61.828 0.0 0.0 5.3602 0.0 0.0 0.0 220.07264124088127 220.07264124088127 48.09894379144197 0.0 0.0 0.0 0 1.1861818737241734 2.0 0.3807196863200844 0.4247425010840047 {[DA]|[EG]}MQV{[CP]|[EA]}W 5.3602 - 168 + 1 2.355 69904.0 0.8500000238418579 1946 4218 6163 HBL1_DMSO_200M_050219_2,6166 HBL1_DMSO_200M_050219_2,6166,EGMYTGHGRM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6168 32.346 26.0 2354000.0 25 0 355440.0 + 35763 SVIKELRKA 9 77 348.5569602737142 1042.6490514213426 3 348.5564758181572 MULTI CID FTMS 0 0 0 6167 1651692.75 0.417591653389063 1 -0.0234107971191406 1 Unmodified _SVIKELRKA_ ENSG00000204899|ENST00000377818|MZT1 19.361941925380144 0.3125782356748823 4 SV{I|L}KE{I|L} 6 3 67.445 0.0 0.0 6.4686 0.0 0.0 0.0 370.2197664850219 370.2197664850219 55.53334925148606 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + SV{I|L}KE{I|L} 6.4686 + + 74 + 1 2.355 55726.1 1.0 1947 4219 6167 HBL1_DMSO_200M_050219_2,6168 HBL1_DMSO_200M_050219_2,6168,SVIKELRKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6169 32.348 93.0 541460.0 25 0 66371.0 + 17712 KPTPTMLPL 9 64 499.2928438774193 996.5711348216386 2 499.2927123904228 MULTI CID FTMS 0 0 0 6167 547903.4375 1.0 0 0.0 2 Unmodified _KPTPTMLPL_ REV__ENST00000524459.5_1_6:26365525-26368786:+|nuORF 21.74664581756881 0.2544899275067181 4 KPT 3 -1 39.253 0.0 0.0 3.9388 0.0 0.0 0.0 667.353320392518 667.353320392518 20.256214908100457 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 KPT 3.9388 + + 23 + 1 2.355 42928.4 1.0 1948 4219 6167 HBL1_DMSO_200M_050219_2,6169 HBL1_DMSO_200M_050219_2,6169,KPTPTMLPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6170 32.351 133.0 386900.0 25 0 42804.0 -1 NPSMPQRTV 9 97 523.2569476857481 1044.499342438296 2 523.2571288943291 MULTI CID FTMS 0 0 0 6167 332254.34375 0.8198626084923454 2 -0.0458297729492187 3 Oxidation (M) _NPSM(Oxidation (M))PQRTV_ ENSG00000197943|ENST00000564138|PLCG2 27.22323531849824 0.1848086127304535 4 NPS{M(Oxidation (M))|F} 4 -1 51.657 0.0 0.0 4.9456 0.0 0.0 0.0 596.3157639368147 596.3157639368147 28.46910013008056 0.0 0.0 0.0 0 0.75 1.5228787452803376 0.0 0.0 NPS{M(Oxidation (M))|F} 4.9456 + + 85 + 1 2.355 46176.1 1.0 1949 4219 6167 HBL1_DMSO_200M_050219_2,6170 HBL1_DMSO_200M_050219_2,6170,NPSMPQRTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6171 32.365 800.0 160050.0 25 0 12905.0 + 13237 HHPDYNNEL 9 144 569.7479361771373 1137.4813194210744 2 569.7487670779228 MULTI CID FTMS 0 0 0 6167 147317.0 1.0 0 0.0 4 Unmodified _HHPDYNNEL_ ENSG00000120509|ENST00000239666|PDZD11;nc|ENSG00000120509|Q5EBL8-2|PDZD11 36.12702656103203 0.0967173616627612 4 HH[DP]YNNE{I|L} 9 0 + 62.101 0.0 0.0 5.4595 5.4595 79.733 0.0 0.0 0.0 15.131189079911811 14.973024840566469 14.973024840566469 6.047575072713158 0 0.0 1.3979400086720375 0.0 0.9247425010840048 + + HH[DP]YNNE{I|L};HH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DNNE{I|L};HH[DP]YGGNE{I|L};HH[DP]YNGGE{I|L};[WY]HYNNE{I|L};HH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DGGNE{I|L};HH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DNGGE{I|L};[DP]HHYNNE{I|L};HH[DN]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NE{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DHYNNE{I|L} 5.4595;4.9278;4.65;4.65;4.1293;4.1183;4.1183;3.9558;3.6675;3.5186 +;-;-;-;-;-;-;-;-;- + 1255 1 2.355 97269.8 0.7300000190734863 1950 4219 6167 HBL1_DMSO_200M_050219_2,6171 HBL1_DMSO_200M_050219_2,6171,HHPDYNNEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6173 32.369 18.0 3851300.0 25 0 646200.0 + 24269 MAPPPPRSV 9 50 476.256952162498 950.499351391796 2 476.2569152712822 MULTI CID FTMS 0 0 0 6172 3468291.5 0.4570177224430472 8 -0.251739501953125 1 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 4 {[DS]|[MA]|[CV]|TT}PPP 5 4 51.026 0.0 0.0 5.3683 0.0 0.0 0.0 454.24180017642817 454.24180017642817 47.53083433768431 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 + {[DS]|[MA]|[CV]|TT}PPP 5.3683 + + 20 + 1 2.348 60199.3 1.0 1951 4220 6172 HBL1_DMSO_200M_050219_2,6173 HBL1_DMSO_200M_050219_2,6173,MAPPPPRSV False True MAPPPPRSV 32.369333 476.256915271282 875644560.0 6172.0 ENSG00000105879|ENST00000440859|CBLL1;;nc|ENSG00000105879|Q75N03-2|CBLL1 7.687113285064697 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6174 32.371 46.0 1483700.0 25 0 167280.0 15349 IPLTLHTV 8 72 447.2761269222121 892.5377009112242 2 447.2755920290947 MULTI CID FTMS 0 0 0 6172 1348390.375 0.3663433065286883 37 -1.7152252197265625 2 Unmodified _IPLTLHTV_ ENSG00000039600|ENST00000265007|SOX30;nc|ENSG00000039600|O94993-2|SOX30 32.116972079565 0.368454113111938 4 {I|L}PPP 4 6 52.295 0.0 0.0 5.8591 0.0 0.0 0.0 485.2715242975219 485.2715242975219 42.54095913243386 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPP 5.8591 - 125 + 1 2.348 58757.7 1.0 1952 4220 6172 HBL1_DMSO_200M_050219_2,6174 HBL1_DMSO_200M_050219_2,6174,IPLTLHTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6175 32.373 145.0 471960.0 25 0 45597.0 28065 PPGGVKGG 8 91 334.6900910434866 667.3656291537732 2 334.6892578005791 MULTI CID FTMS 0 0 0 6172 293654.0 0.0325234209188812 20 -0.7892570495605469 3 Unmodified _PPGGVKGG_ ENSG00000198771|ENST00000367854|RCSD1;nc|ENSG00000198771|Q6JBY9-2|RCSD1 0.0 0.8243325171867699 4 [{I|L}A]NH[{I|L}T] 6 8 + 32.177 0.0 0.0 4.8215 4.8215 82.456 0.0 0.0 0.0 17.267510821745844 1.9652887749746453 1.9652887749746453 11.471839183018815 0 0.3494850021680094 2.0 0.7396518287104438 0.3494850021680094 [{I|L}A]NH[{I|L}T];[HN]T{I|L}[{I|L}A];[{I|L}A]GGH[{I|L}T];[HT]{I|L}N[{I|L}A];[HT]N{I|L}[{I|L}A] 4.8215;3.1025;2.8863;0.97505;0.77137 -;-;-;-;- 44 + 1 2.348 60486.4 1.0 1953 4220 6172 HBL1_DMSO_200M_050219_2,6175 HBL1_DMSO_200M_050219_2,6175,PPGGVKGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6176 32.387 800.0 240290.0 25 0 18884.0 -1 MAPPPPRSV 9 156 484.25449292526935 966.4944329173388 2 484.2538635134697 MULTI CID FTMS 0 0 0 6172 145253.421875 0.7177100985824478 11 -0.3249740600585937 4 Oxidation (M) _M(Oxidation (M))APPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 21.53697664764585 0.2571576504437394 4 {[MS]|[{M(Oxidation (M))|F}A]}PPP 5 -1 45.713 0.0 0.0 4.7298 0.0 0.0 0.0 454.2419832818969 454.2419832818969 35.798504214337555 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}PPP 4.7298 + + 402 + 1 2.348 148205.8 0.6499999761581421 1954 4220 6172 HBL1_DMSO_200M_050219_2,6176 HBL1_DMSO_200M_050219_2,6176,MAPPPPRSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6178 32.392 63.0 1192900.0 25 0 117640.0 + 13137 HFIEKAHTL 9 102 365.8692653838752 1094.5859667518257 3 365.8691894412041 MULTI CID FTMS 0 0 0 6177 946029.125 0.2850929887591386 6 -0.1988868713378906 1 Unmodified _HFIEKAHTL_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19762333-19763700:-|nuORF;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 84.5221896805406 0.0164210731287474 4 {I|L}{M(Oxidation (M))|F}HEKAHT{I|L} 9 2 + 76.685 0.0 0.0 7.0058 7.0058 79.831 0.0 0.0 0.0 14.973024840566469 2.162924435491945 2.162924435491945 2.162924435491945 0 1.8494850021680087 0.0 2.309894379144197 0.0 {I|L}{M(Oxidation (M))|F}HEKAHT{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EKAHT{I|L};{I|L}{M(Oxidation (M))|F}HEKA[{I|L}T]H;{[{M(Oxidation (M))|F}H]|[RQ]}RKEHE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]}HT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HEKAHT{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}T[KA]HE{I|L};[HA]T{I|L}K{M(Oxidation (M))|F}HE{I|L};[{I|L}T]HN{I|L}{M(Oxidation (M))|F}HT{I|L};[HA]TK{I|L}{M(Oxidation (M))|F}HE{I|L} 7.0058;6.8082;6.1203;5.935;5.8749;5.1873;4.7731;4.7637;4.7507;4.7066 -;+;-;-;-;-;-;-;-;- + 2354 + 1 2.348 66172.8 1.0 1955 4221 6177 HBL1_DMSO_200M_050219_2,6178 HBL1_DMSO_200M_050219_2,6178,HFIEKAHTL True True HFIEKAHTL 32.391754 365.869189441204 66497322.0 6177.0 nc|ENSG00000105726|Q9HD20-2|ATP13A1;;ENSG00000105726|ENST00000357324|ATP13A1;;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;;ENST00000469641.5_1_19:19762333-19763700:-|nuORF 6.34947395324707 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6179 32.406 800.0 110540.0 25 0 7621.5 + 28917 QAPPPPQQV 9 132 481.2574135344112 960.5002741356224 2 481.2575561404228 MULTI CID FTMS 0 0 0 6177 51460.40625 0.4367461749173558 1 -0.0355339050292968 2 Unmodified _QAPPPPQQV_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 32.30548876998284 0.1201446275138228 4 [QA]PPS 5 5 26.453 0.0 0.0 2.7541 0.0 0.0 0.0 477.2408801749381 477.2408801749381 12.958391974997204 0.0 0.0 0.0 0 0.7887254899964358 1.2218487496163564 0.0 0.5501648626366046 [QA]PPS 2.7541 - 249 1 2.348 70426.5 0.5699999928474426 1956 4221 6177 HBL1_DMSO_200M_050219_2,6179 HBL1_DMSO_200M_050219_2,6179,QAPPPPQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6180 32.408 90.0 849330.0 25 0 58193.0 + 4081 DAMTGNSERSS 11 117 385.495936709114 1153.465980727542 3 385.4960510134697 MULTI CID FTMS 0 0 0 6177 514422.84375 0.5176820730163221 -2 0.0458297729492187 3 Unmodified _DAMTGNSERSS_ REV__ENSG00000121270|ENST00000356608|ABCC11;REV__nc|ENSG00000121270|Q96J66-2|ABCC11 12.240655878213236 0.7805268987462184 4 {[DA]|[EG]}[KA][YC(Carbamidomethyl (C))]Q 7 -1 30.8 0.0 0.0 2.6702 0.0 0.0 0.0 314.0814845897623 314.0814845897623 18.77529213885905 0.0 0.0 0.0 0 0.0 2.0 0.8252574989159953 0.3807196863200844 {[DA]|[EG]}[KA][YC(Carbamidomethyl (C))]Q 2.6702 - 152 1 2.348 66116.6 1.0 1957 4221 6177 HBL1_DMSO_200M_050219_2,6180 HBL1_DMSO_200M_050219_2,6180,DAMTGNSERSS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6181 32.412 250.0 372680.0 25 0 119760.0 27461 PKARGGCP 8 100 393.2085570700276 784.4025612068551 2 394.2115051150322 MULTI CID FTMS 0 0 0 -1 0 4 Unmodified _PKARGGCP_ ENST00000485732.5_1_9:139747929-139748217:+|nuORF 0.7936320650641473 0.8195151834710337 4 {I|L} 1 8 14.604 0.0 0.0 1.8618 0.0 0.0 653.3076648218927 0.0 653.3076648218927 0.0 4.638246794993387 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.8618 - 37 + 1 2.348 76988.0 1.0 1958 4221 6177 HBL1_DMSO_200M_050219_2,6181 HBL1_DMSO_200M_050219_2,6181,PKARGGCP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6182 32.423 609.0 398170.0 25 0 28625.0 + 40767 KVLGKIEKV 9 232 338.5619252587675 1012.6639463765024 3 338.5612975955009 MULTI CID FTMS 0 0 0 6177 185456.9375 1.0 0 0.0 5 Unmodified _VLKVNLKTV_ nc|ENSG00000198589|P50851|LRBA;nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA 18.373094154950223 0.3393451798331396 4 VKVAK{I|L}EKV 9 5 + 39.512 0.0 0.0 3.9018 3.9018 64.919 0.0 0.0 0.0 15.999686271123087 4.541740317262828 4.541740317262828 0.6861141617683373 0 0.6936726795685343 0.0 0.3807196863200844 0.5 VKVAK{I|L}EKV;KVVAK{I|L}EKV;VK{I|L}GK{I|L}EKV;KV{I|L}GK{I|L}EKV;VKV{I|L}AKEKV;KVV{I|L}AKEKV;VK{I|L}VAKEKV;KV{I|L}VAKEKV;VKVAK{I|L}EVK;KVVAK{I|L}EVK 3.9018;3.8341;3.8231;3.7554;3.5867;3.519;3.508;3.4403;3.3334;3.2657 -;-;-;-;-;-;-;-;-;- 550 + 1 2.348 191049.1 1.0 1959 4221 6177 HBL1_DMSO_200M_050219_2,6182 HBL1_DMSO_200M_050219_2,6182,VLKVNLKTV False False KVLGKIEKV 32.422849 338.561297595501 764907.5 6177.0 nc|ENSG00000198589|P50851|LRBA;;nc|ENSG00000198589|P50851-2|LRBA;;ENSG00000198589|ENST00000651943|LRBA 4.337631702423096 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6184 32.427 31.0 2679700.0 25 0 362690.0 27512 PKLPPRGVG 9 68 307.5275544155195 919.5608338467584 3 307.5268737673759 MULTI CID FTMS 0 0 0 6183 2156661.0 0.3552977964861504 -18 0.5107345581054688 1 Unmodified _PKLPPRGVG_ ENSG00000169184|ENST00000302326|MN1 6.723162845929126 0.6799819581413107 4 {I|L}[KP]PP 5 6 22.218 0.0 0.0 2.4162 0.0 0.0 0.0 384.1998385065063 384.1998385065063 16.73393743112328 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}[KP]PP 2.4162 - 38 + 1 2.348 71967.8 1.0 1960 4222 6183 HBL1_DMSO_200M_050219_2,6184 HBL1_DMSO_200M_050219_2,6184,PKLPPRGVG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6185 32.431 195.0 310910.0 25 0 20352.0 + -1 SMQCSQESM 9 99 544.194600326848 1086.374647720496 2 544.1959716677666 MULTI CID FTMS 0 0 0 6183 467505.40625 0.1097511169834778 10 -0.2967758178710937 2 Carbamidomethyl (C) _SMQC(Carbamidomethyl (C))SQESM_ REV__ENSG00000171115|ENST00000307271|GIMAP8 10.073929032068715 0.563993802247229 4 MSS[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V 6 -1 23.848 0.0 0.0 2.1952 0.0 0.0 357.0994534839709 0.0 357.0994534839709 0.0 -0.1503844293812015 -0.1503844293812015 0.0 0 0.0 0.0 1.25 0.0 MSS[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V 2.1952 - 448 + 1 2.348 55665.9 1.0 1961 4222 6183 HBL1_DMSO_200M_050219_2,6185 HBL1_DMSO_200M_050219_2,6185,SMQCSQESM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6186 32.434 136.0 640620.0 25 0 341050.0 -1 0 60 393.2087539784002 392.2014775118002 1 393.2093994021416 MULTI CID FTMS 0 0 0 6183 358673.84375 0.0484153799558263 12 -0.3753433227539062 3 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L} 3 -1 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} + + 14.604 1.7339 0.66407 3.7236 3.7236 47.821 0.0 0.0 0.0 0.0 2.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L} 3.7236 - 6 + 1 2.348 72827.1 1.0 1962 4222 6183 HBL1_DMSO_200M_050219_2,6186 HBL1_DMSO_200M_050219_2,6186, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6187 32.437 182.0 445330.0 25 0 60586.0 + 21600 LPKPPGRGV 9 74 460.78720631801633 919.5598597028328 2 460.7868530154228 MULTI CID FTMS 0 0 0 6183 320318.9375 0.2573679834235249 -19 0.5520076751708984 4 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 26.88365393820708 0.1891292719743517 4 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG 8 5 65.112 0.0 0.0 7.0808 0.0 0.0 0.0 68.05139337711171 68.05139337711171 51.13290021996811 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3252574989159953 0.3807196863200844 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG 7.0808 - 86 + 1 2.348 67547.5 1.0 1963 4222 6183 HBL1_DMSO_200M_050219_2,6187 HBL1_DMSO_200M_050219_2,6187,LPKPPGRGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6188 32.451 800.0 291250.0 25 0 13520.0 -1 IRCNGLMMNAF 11 147 663.8069297097319 1325.5993064862637 2 663.8066894412041 MULTI CID FTMS 0 0 0 6183 287979.28125 0.651926036726111 -1 0.0355339050292968 5 Carbamidomethyl (C) _IRC(Carbamidomethyl (C))NGLMMNAF_ ENSG00000058335|ENST00000558480|RASGRF1;ENST00000560334.5_1_15:79271198-79356973:-|nuORF;nc|ENSG00000058335|Q13972|RASGRF1 36.12702656103203 0.2720571796884491 4 {[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F} 13 -1 + 115.07 0.0 0.0 8.6809 8.6809 91.779 0.0 0.0 0.0 9.542425094393252 16.642078980768062 9.542425094393252 9.072459467631006 0 0.9802046884880936 1.3979400086720375 0.566901560044258 2.5158715643802765 {[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}A[AG]QNA{M(Oxidation (M))|F};[AG]NA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};[AG]GGA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};[AG]GQ{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F} 8.6809;7.9965;7.9965;7.9965;7.961;7.9494;7.8432;7.7727;7.7306;7.5238 -;-;-;-;-;-;-;-;-;- 9490 1 2.348 168697.7 0.9200000166893004 1964 4222 6183 HBL1_DMSO_200M_050219_2,6188 HBL1_DMSO_200M_050219_2,6188,IRCNGLMMNAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6189 32.457 314.0 172300.0 25 0 19284.0 3504 CPICRQAI 8 88 452.2293765669107 902.4442002006214 2 452.2288390994072 MULTI CID FTMS 0 0 0 6183 169932.71875 0.7340733130114309 -2 0.057952880859375 6 Unmodified _CPICRQAI_ ENSG00000090432|ENST00000264198|MUL1 10.183394434864962 0.7604730176254005 4 A{I|L} 2 6 17.691 0.0 0.0 1.9603 0.0 0.0 700.3121791818699 0.0 700.3121791818699 0.0 3.399028321079953 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + A{I|L} 1.9603 + + 35 + 1 2.348 46806.0 1.0 1965 4222 6183 HBL1_DMSO_200M_050219_2,6189 HBL1_DMSO_200M_050219_2,6189,CPICRQAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6190 32.471 800.0 165940.0 25 0 7351.7 5410 DLLAWWPNPQ 10 116 620.3133317599178 1238.6121105866357 2 620.3121826052666 MULTI CID FTMS 0 0 0 6183 136490.125 0.3065449915044819 -23 0.7285060882568359 7 Unmodified _DLLAWWPNPQ_ ENSG00000160161|ENST00000291495|CILP2 18.1463463914782 0.5430639438673815 4 {[HG]|PP}AMPPPPP[QP]N 12 9 {[HG]|PP}AM + + 64.109 7.167 1.809 5.1759 5.1759 53.257 0.0 0.0 0.0 0.0 46.81847389103287 0.0 0.0 0 2.774227503252014 0.0 0.0 1.3001648626366045 {[HG]|PP}AMPPPPP[QP]N 5.1759 - 2322 + 1 2.348 103681.5 0.6100000143051147 1966 4222 6183 HBL1_DMSO_200M_050219_2,6190 HBL1_DMSO_200M_050219_2,6190,DLLAWWPNPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6192 32.475 21.0 2414100.0 25 0 440720.0 + 26138 NPSMPQRTV 9 68 515.25975250221 1028.5049520712198 2 515.2606078982353 MULTI CID FTMS 0 0 0 6191 2855708.5 0.4821629206724732 7 -0.208465576171875 1 Unmodified _NPSMPQRTV_ ENSG00000197943|ENST00000564138|PLCG2 28.49450938151212 0.1686335738423394 4 NPSMPQ 6 3 60.851 0.0 0.0 5.9165 0.0 0.0 0.0 371.20554529361567 371.20554529361567 50.59054065780998 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.4247425010840047 + NPSMPQ 5.9165 + + 42 + 1 2.348 45650.0 1.0 1967 4223 6191 HBL1_DMSO_200M_050219_2,6192 HBL1_DMSO_200M_050219_2,6192,NPSMPQRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6193 32.489 800.0 142400.0 25 0 31730.0 -1 0 81 874.6409271897278 4368.168253615639 5 875.2458373904228 MULTI CID FTMS 0 0 0 6191 26962.09765625 0.1518882314439385 5 -0.1458854675292968 2 4 GQS[QP] 5 -1 30.713 0.0 0.0 0.70312 0.0 0.0 3852.9411999832337 0.0 3852.9411999832337 0.0 14.515449934959715 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 GQS[QP] 0.70312 - 33 1 2.348 90741.4 0.6000000238418579 1968 4223 6191 HBL1_DMSO_200M_050219_2,6193 HBL1_DMSO_200M_050219_2,6193, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6195 32.494 14.0 3188900.0 25 0 471880.0 + 32616 SAYDNVNKV 9 65 505.2506821030496 1008.4868112728992 2 505.2508117556572 MULTI CID FTMS 0 0 0 6194 4340320.0 0.8109300074202098 2 -0.0708045959472656 1 Unmodified _SAYDNVNKV_ ENSG00000100030|ENST00000215832|MAPK1;nc|ENSG00000100030|P28482-2|MAPK1 34.40172386719151 0.1061884637610825 4 {[SA]|[TG]}YDNVNKV 9 0 + 62.603 0.0 0.0 6.2076 6.2076 86.436 0.0 0.0 0.0 36.9408341705779 7.949624067838314 7.949624067838314 9.208187539523747 0 0.3807196863200844 1.6989700043360187 0.0 0.8494850021680094 + + {[SA]|[TG]}YDNVNKV;{[SA]|[TG]}YDNVGGKV;{[SA]|[TG]}YDGGVNKV;{[SA]|[TG]}YDGGVGGKV 6.2076;5.2945;5.2945;4.3858 +;-;-;- + 146 + 1 2.348 43111.2 1.0 1969 4224 6194 HBL1_DMSO_200M_050219_2,6195 HBL1_DMSO_200M_050219_2,6195,SAYDNVNKV True True SAYDNVNKV 32.493526 505.250811755657 52890752.125 6194.0 ENSG00000100030|ENST00000215832|MAPK1;;nc|ENSG00000100030|P28482-2|MAPK1 8.30761750539144 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6196 32.495 57.0 1153400.0 25 0 194980.0 + 21863 LPPEQRQSI 9 56 534.2951098195646 1066.575666705929 2 534.2949706912041 MULTI CID FTMS 0 0 0 6194 945678.5 0.7205177072090266 -12 0.326324462890625 2 Unmodified _LPPEQRQSI_ ENSG00000101811|ENST00000372972|CSTF2;ENSG00000177613|ENST00000331173|CSTF2T;nc|ENSG00000101811|P33240-2|CSTF2 21.53697664764585 0.2571576504437394 4 {I|L}PPEP 5 5 62.206 0.0 0.0 5.8323 0.0 0.0 0.0 530.2752051764909 530.2752051764909 55.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPEP 5.8323 - 25 + 1 2.348 58131.5 1.0 1970 4224 6194 HBL1_DMSO_200M_050219_2,6196 HBL1_DMSO_200M_050219_2,6196,LPPEQRQSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6197 32.5 301.0 183560.0 25 0 6860.7 -1 0 84 628.888565881189 3139.406447072945 5 629.2897216677666 MULTI CID FTMS 0 0 0 6194 213003.828125 1.0 0 0.0 3 4 {M(Oxidation (M))|F}H{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4 -1 12.932 0.0 0.0 0.41192 0.0 0.0 2580.160244535639 0.0 2580.160244535639 0.0 1.478174818886373 0.0 0.0 0 0.0 0.0 0.5 0.0 {M(Oxidation (M))|F}H{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 0.41192 - 231 + 1 2.348 49926.2 1.0 1971 4224 6194 HBL1_DMSO_200M_050219_2,6197 HBL1_DMSO_200M_050219_2,6197, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6198 32.509 487.0 226140.0 25 0 29972.0 + 41551 VPPDTRNVV 9 104 498.77759939018216 995.5406458471645 2 498.7771179080009 MULTI CID FTMS 0 0 0 6194 174366.46875 0.244510257049821 -18 0.5035591125488281 4 Unmodified _VPPDTRNVV_ ENSG00000275835|ENST00000615383|TUBGCP5;nc|ENSG00000275835|Q96RT8-2|TUBGCP5 15.248480904072842 0.4239247793462406 4 VPPD 4 5 56.186 0.0 0.0 5.6437 0.0 0.0 0.0 584.3165221349502 584.3165221349502 44.40288865343212 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VPPD 5.6437 + + 136 + 1 2.348 86661.3 1.0 1972 4224 6194 HBL1_DMSO_200M_050219_2,6198 HBL1_DMSO_200M_050219_2,6198,VPPDTRNVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6199 32.518 536.0 371270.0 25 0 44950.0 -1 0 172 337.6793378319548 673.3441227307096 2 337.6786071658134 MULTI CID FTMS 0 0 0 6194 173565.765625 0.4096280773891915 -11 0.3075294494628906 5 4 {[VA]|[{I|L}G]}PYPQ 6 -1 + 60.877 0.0 0.0 9.041 9.041 96.582 0.0 0.0 0.0 24.973024840566467 15.414930551903224 15.414930551903224 17.265251742466447 0 0.4247425010840047 2.0 0.0 0.5994850021680094 {[VA]|[{I|L}G]}PYPQ;{[VA]|[{I|L}G]}PYQP;{[VA]|[{I|L}G]}PY[AG]P;{[VA]|[{I|L}G]}QQTQ;{[VA]|[{I|L}G]}{[QG]|[NA]}ATQ;{[VA]|[{I|L}G]}P[PA][YG];{[VA]|[{I|L}G]}[RV]DD;{[VA]|[{I|L}G]}{[QG]|[NA]}[NS]V 9.041;6.4769;4.5949;4.5208;3.9129;3.8676;2.4819;1.1809 -;-;-;-;-;-;-;- 114 + 1 2.348 155879.7 1.0 1973 4224 6194 HBL1_DMSO_200M_050219_2,6199 HBL1_DMSO_200M_050219_2,6199, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6200 32.523 256.0 290800.0 25 0 15359.0 + 43176 VYTQNAEM 8 107 478.2122582393423 954.4099635454846 2 478.2126647830009 MULTI CID FTMS 0 0 0 6194 107527.0 0.6915902239325402 -1 0.0183372497558593 6 Unmodified _VYTQNAEM_ ENSG00000100902|ENST00000261479|PSMA6;ENST00000554843.5_1_14:35761682-35780127:+|nuORF;ENST00000603247.1_1_13:98128238-98128670:+|nuORF;nc|ENSG00000100902|P60900-2|PSMA6;nc|ENSG00000100902|P60900-3|PSMA6 14.581692164780916 0.6954967302934248 4 TM 2 6 19.464 0.0 0.0 2.0394 0.0 0.0 704.3139258518449 0.0 704.3139258518449 0.0 8.750612633917001 0.0 0.0 0 0.0 0.0 0.0 0.0 TM 2.0394 - 134 + 1 2.348 61250.8 1.0 1974 4224 6194 HBL1_DMSO_200M_050219_2,6200 HBL1_DMSO_200M_050219_2,6200,VYTQNAEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6202 32.532 282.0 291680.0 25 0 18078.0 + 31488 RPYEKGRLI 9 109 377.892036347364 1130.6542796422918 3 377.8922912478447 MULTI CID FTMS 0 0 0 6201 170956.171875 0.5281592541931458 9 -0.2748336791992187 1 Unmodified _RPYEKGRLI_ ENSG00000086061|ENST00000330899|DNAJA1;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;nc|ENSG00000086061|P31689-2|DNAJA1 18.373094154950223 0.3393451798331396 4 {I|L}{I|L} 2 7 20.969 0.0 0.0 1.8546 0.0 0.0 0.0 901.4684390206066 901.4684390206066 4.796962438796157 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}{I|L} 1.8546 + + 65 + 1 2.337 68178.5 1.0 1975 4225 6201 HBL1_DMSO_200M_050219_2,6202 HBL1_DMSO_200M_050219_2,6202,RPYEKGRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6203 32.546 800.0 87190.0 25 0 5510.5 + 9013 FCQQKCVPCD 10 101 585.7383395945567 1169.4621262559133 2 585.7380859255791 MULTI CID FTMS 0 0 0 6201 109737.390625 1.0 0 0.0 2 Unmodified _FCQQKCVPCD_ REV__ENSG00000130726|ENST00000253024|TRIM28 18.1463463914782 0.5430639438673815 4 {[DA]|[EG]}{M(Oxidation (M))|F}QVC(Carbamidomethyl (C))VE 8 -1 52.406 0.0 0.0 4.4812 0.0 0.0 0.0 218.07660502913896 218.07660502913896 46.921145796255374 0.0 0.0 0.0 0 2.0924778212679485 1.6989700043360187 0.2887254899964357 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}QVC(Carbamidomethyl (C))VE 4.4812 - 190 1 2.337 57710.4 0.5699999928474426 1976 4225 6201 HBL1_DMSO_200M_050219_2,6203 HBL1_DMSO_200M_050219_2,6203,FCQQKCVPCD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6204 32.56 800.0 178360.0 25 0 25161.0 -1 KMSHCNDF 8 137 527.7074344271591 1053.400315921118 2 527.7068359255791 MULTI CID FTMS 0 0 0 6201 109410.3515625 0.2545014760314174 -10 0.2998390197753906 3 Carbamidomethyl (C),Oxidation (M) _KM(Oxidation (M))SHC(Carbamidomethyl (C))NDF_ ENST00000319653.13_1_1:240637457-240637514:+|nuORF 37.97399986684836 0.2681860861828418 4 KESSWA 6 -1 46.885 0.0 0.0 4.4509 0.0 0.0 347.0840016095719 0.0 347.0840016095719 0.0 27.421525057367404 0.0 0.0 0 0.9177353201839438 0.0 0.805462187404089 0.4247425010840047 KESSWA 4.4509 - 466 1 2.337 110947.6 0.5699999928474426 1977 4225 6201 HBL1_DMSO_200M_050219_2,6204 HBL1_DMSO_200M_050219_2,6204,KMSHCNDF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6206 32.564 49.0 974510.0 25 0 187660.0 + 13636 HPRTSITV 8 70 455.75834558181776 909.5021382304355 2 455.7585632205009 MULTI CID FTMS 0 0 0 6205 1064233.875 0.4022988652391787 4 -0.11932373046875 1 Unmodified _HPRTSITV_ ENSG00000077348|ENST00000221233|EXOSC5;ENST00000593523.1_1_19:41897706-41903233:-|nuORF 37.97399986684836 0.2681860861828418 4 V{M(Oxidation (M))|F} 2 8 36.198 0.0 0.0 3.98 0.0 0.0 0.0 660.3581528039288 660.3581528039288 6.505149978319906 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 V{M(Oxidation (M))|F} 3.98 - 40 + 1 2.337 43129.4 1.0 1978 4226 6205 HBL1_DMSO_200M_050219_2,6206 HBL1_DMSO_200M_050219_2,6206,HPRTSITV False True HPRTSITV 32.56433 455.758563220501 27990838.0 6205.0 ENST00000593523.1_1_19:41897706-41903233:-|nuORF;;ENSG00000077348|ENST00000221233|EXOSC5 5.103414853413899 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6207 32.578 800.0 134740.0 25 0 9398.2 + -1 LIEAKQSIDNM 11 142 426.55256946706646 1276.6358790013994 3 426.5530883669853 MULTI CID FTMS 0 0 0 6205 40937.76171875 0.1485490900575936 4 -0.11932373046875 2 Oxidation (M) _LIEAKQSIDNM(Oxidation (M))_ REV__ENSG00000162614|ENST00000334785|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-2|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN 6.234356020891411 0.8457338374961867 4 SSAA 4 -1 26.058 0.0 0.0 2.0411 0.0 0.0 465.3025792961244 492.1726473443969 957.4752266405212 0.0 0.0 0.0 0.0 0 0.6505149978319906 0.0 0.0 0.0 SSAA 2.0411 - 251 + 1 2.337 88476.2 0.449999988079071 1979 4226 6205 HBL1_DMSO_200M_050219_2,6207 HBL1_DMSO_200M_050219_2,6207,LIEAKQSIDNM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6208 32.579 34.0 2953200.0 25 0 243370.0 + 32304 RYADRVKEL 9 82 383.8841588247727 1148.6306470745185 3 383.8838683962822 MULTI CID FTMS 0 0 0 6205 1599671.375 0.1039381939056055 -9 0.2858390808105469 3 Unmodified _RYADRVKEL_ ENSG00000142945|ENST00000372224|KIF2C;ENSG00000186638|ENST00000402558|KIF24;nc|ENSG00000142945|Q99661-2|KIF2C;nc|ENSG00000186638|Q5T7B8-2|KIF24;nc|ENSG00000186638|Q5T7B8-4|KIF24 28.23362336080872 0.1719529537093671 4 {I|L}{M(Oxidation (M))|F}KVRDA{[MG]|[TS]}{I|L} 10 8 + 60.655 0.0 0.0 5.2806 5.2806 76.116 0.0 0.0 0.0 16.53212513775344 8.789850105233299 8.789850105233299 3.789850105233299 0 0.4247425010840047 0.0 0.4247425010840047 0.3054621874040891 {I|L}{M(Oxidation (M))|F}KVRDA{[MG]|[TS]}{I|L};{I|L}{M(Oxidation (M))|F}KVRD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};[YR]ADRVKE{I|L};{I|L}{M(Oxidation (M))|F}KV[VG]DA{[MG]|[TS]}{I|L};{I|L}{M(Oxidation (M))|F}KV[VG]D{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};{I|L}{M(Oxidation (M))|F}KV[WR]{[MG]|[TS]}{I|L};{I|L}{M(Oxidation (M))|F}R[WR]A{[MG]|[TS]}{I|L};{I|L}{M(Oxidation (M))|F}R[WR]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};[KQ]Q[KG]YRE{I|L};[VP]YY[{I|L}P]RE{I|L} 5.2806;4.9507;4.5154;4.2168;4.149;4.1278;3.0606;2.1269;1.9479;1.2944 -;-;+;-;-;-;-;-;-;- + 396 + 1 2.337 88527.5 1.0 1980 4226 6205 HBL1_DMSO_200M_050219_2,6208 HBL1_DMSO_200M_050219_2,6208,RYADRVKEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6209 32.581 100.0 996710.0 25 0 145670.0 + 34323 SLSCCDGF 8 98 416.15385180395657 830.2931506747132 2 416.1541015505791 MULTI CID FTMS 0 0 0 6205 724557.875 0.2967271298018117 -9 0.2858390808105469 4 Unmodified _SLSCCDGF_ REV__ENSG00000143669|ENST00000389793|LYST;REV__ENST00000465349.5_1_1:235954948-235996891:-|nuORF;REV__ENST00000489585.5_1_1:235926109-235996891:-|nuORF;REV__nc|ENSG00000143669|Q99698-2|LYST;REV__nc|ENSG00000143669|Q99698-3|LYST 5.760428011301431 0.7893668129297577 4 {NN|[MP]|[D{I|L}]|[EV]}{[QS]|[NT]}{M(Oxidation (M))|F} 5 -1 17.821 0.0 0.0 2.1464 0.0 0.0 0.0 237.00161157779533 237.00161157779533 1.3623076280088997 0.0 0.0 0.0 0 0.2134679910804404 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[QS]|[NT]}{M(Oxidation (M))|F} 2.1464 - 59 + 1 2.337 83366.9 1.0 1981 4226 6205 HBL1_DMSO_200M_050219_2,6209 HBL1_DMSO_200M_050219_2,6209,SLSCCDGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6210 32.586 245.0 408530.0 25 0 157370.0 + 36372 SYQEHVKQL 9 95 566.2932303757918 1130.5719078183836 2 566.2933837771416 MULTI CID FTMS 0 0 0 6205 375711.71875 0.5285689778938583 -8 0.2527961730957031 5 Unmodified _SYQEHVKQL_ ENSG00000117226|ENST00000370481|GBP3;ENSG00000162645|ENST00000370466|GBP2;nc|ENSG00000117226|Q9H0R5-4|GBP3 24.881564428377168 0.2146028316269493 4 V 1 8 10.485 0.0 0.0 0.92737 0.0 0.0 387.2471769691961 641.2310748824642 1028.4782518516604 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + V 0.92737 + + 100 + 1 2.337 81020.7 1.0 1982 4226 6205 HBL1_DMSO_200M_050219_2,6210 HBL1_DMSO_200M_050219_2,6210,SYQEHVKQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6212 32.591 79.0 616340.0 25 0 66995.0 + -1 EGMYTGHGRM 10 69 577.7400718680508 1153.4655908029015 2 577.7411376833916 MULTI CID FTMS 0 0 0 6211 731309.75 0.4271730544021406 4 -0.103668212890625 1 Oxidation (M) _EGMYTGHGRM(Oxidation (M))_ REV__ENSG00000130713|ENST00000372358|EXOSC2;REV__ENST00000430138.6_1_9:133569178-133570981:+|nuORF;REV__ENST00000463488.1_1_9:133569202-133574940:+|nuORF;REV__ENST00000491115.6_1_9:133569178-133574746:+|nuORF;REV__nc|ENSG00000130713|Q13868-2|EXOSC2;REV__nc|ENSG00000130713|Q13868-3|EXOSC2 17.11289562659939 0.5604042439455784 4 {[DA]|[EG]}MQ{M(Oxidation (M))|F}VQC{[NV]|[RG]} 10 -1 + 63.07 0.0 0.0 5.4679 5.4679 82.744 0.0 0.0 0.0 1.6824376479242176 41.247293946369794 1.6824376479242176 9.164539485499256 0 1.924742501084005 2.0 0.0 0.0 {[DA]|[EG]}MQ{M(Oxidation (M))|F}VQC{[NV]|[RG]};{[DA]|[EG]}MQ{M(Oxidation (M))|F}V[AG]C{[NV]|[RG]};{[DA]|[EG]}M[AG]{M(Oxidation (M))|F}VQC{[NV]|[RG]};{[DA]|[EG]}M[AG]{M(Oxidation (M))|F}V[AG]C{[NV]|[RG]};{[DS]|[MA]|[CV]|TT}DQ{M(Oxidation (M))|F}VQC{[NV]|[RG]};{[DS]|[MA]|[CV]|TT}D[AG]{M(Oxidation (M))|F}VQC{[NV]|[RG]};{[DS]|[MA]|[CV]|TT}DQ{M(Oxidation (M))|F}V[AG]C{[NV]|[RG]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[DA]|[EG]}{M(Oxidation (M))|F}VQC{[NV]|[RG]};{[DA]|[EG]}[{M(Oxidation (M))|F}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QC{[NV]|[RG]};{[DS]|[MA]|[CV]|TT}G{[DA]|[EG]}{M(Oxidation (M))|F}VQC{[NV]|[RG]} 5.4679;4.6733;4.6733;3.8819;2.9555;2.161;2.161;2.0664;1.9044;1.7275 -;-;-;-;-;-;-;-;-;- 156 1 2.337 42626.1 1.0 1983 4227 6211 HBL1_DMSO_200M_050219_2,6212 HBL1_DMSO_200M_050219_2,6212,EGMYTGHGRM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6213 32.595 202.0 552740.0 25 0 156370.0 -1 0 60 785.8593276846786 3139.4082048723144 4 786.3612548708916 MULTI CID FTMS 0 0 0 6211 214890.078125 0.7835537388877577 2 -0.06390380859375 2 4 V 1 -1 6.9897 0.0 0.0 0.22264 0.0 0.0 978.4152634532624 2058.9002222685326 3037.315485721795 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.22264 - 6 + 1 2.337 84158.0 1.0 1984 4227 6211 HBL1_DMSO_200M_050219_2,6213 HBL1_DMSO_200M_050219_2,6213, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6214 32.598 199.0 263780.0 25 0 28674.0 + 4002 DALRQTASV 9 87 480.7590939921208 959.5036350510416 2 480.7590209841728 MULTI CID FTMS 0 0 0 6211 277454.875 0.0506543553216901 -9 0.2791061401367187 3 Unmodified _DALRQTASV_ ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT 57.24910588100465 0.0276051374632116 4 {[DA]|[EG]}{I|L}RQTASV 9 0 + 81.085 0.0 0.0 8.4508 8.4508 92.623 0.0 0.0 0.0 15.22160958700539 16.478174818886373 15.22160958700539 9.208187539523747 0 1.7302046884880935 1.5228787452803376 0.7742275032520141 0.0 + + {[DA]|[EG]}{I|L}RQTASV;{[DA]|[EG]}{I|L}R[AG]TASV;[VS]{M(Oxidation (M))|F}[H{I|L}]TASV;[VS]AA[Q{I|L}]WSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[Q{I|L}]DASV;{[SA]|[TG]}VA[Q{I|L}]WSV;[WR][WR]ASV;[VS]AA[Q{I|L}]SWV;[WR]{I|L}QQMV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A[Q{I|L}]WSV 8.4508;7.4911;6.8643;5.1919;4.8276;4.5111;4.1147;4.0433;3.8502;3.7882 +;-;-;-;-;-;-;-;-;- + 493 1 2.337 46582.1 1.0 1985 4227 6211 HBL1_DMSO_200M_050219_2,6214 HBL1_DMSO_200M_050219_2,6214,DALRQTASV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6215 32.603 229.0 384010.0 25 0 37855.0 + 36374 SYQEHVKQL 9 130 377.86489042006 1130.57284186038 3 377.8643371462822 MULTI CID FTMS 0 0 0 6211 203524.46875 0.242804066210733 -7 0.2213058471679687 4 Unmodified _SYQEHVKQL_ ENSG00000117226|ENST00000370481|GBP3;ENSG00000162645|ENST00000370466|GBP2;nc|ENSG00000117226|Q9H0R5-4|GBP3 22.65808497894818 0.2428932432760099 4 {[YC]|[HE]}QVKE{I|L} 7 4 33.109 0.0 0.0 2.9285 0.0 0.0 0.0 264.09909246629405 264.09909246629405 20.89043799626276 0.0 0.0 0.0 0 0.0 0.0 1.7602396519197263 0.7302046884880937 {[YC]|[HE]}QVKE{I|L} 2.9285 - 742 1 2.337 71288.7 1.0 1986 4227 6211 HBL1_DMSO_200M_050219_2,6215 HBL1_DMSO_200M_050219_2,6215,SYQEHVKQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6216 32.616 800.0 181010.0 25 0 44751.0 27110 PFIYGDIPQ 9 128 525.2671621989202 0 525.2675048708916 PEAK CID FTMS 0 0 0 6211 90722.546875 0.2726210349643678 -11 0.3304901123046875 5 Unmodified _PFIYGDIPQ_ ENSG00000196876|ENST00000627620|SCN8A;nc|ENSG00000196876|Q9UQD0-3|SCN8A;nc|ENSG00000196876|Q9UQD0-4|SCN8A;nc|ENSG00000196876|Q9UQD0-5|SCN8A;nc|ENSG00000196876|Q9UQD0|SCN8A 11.640296217721598 0.2934555500198502 4 {I|L}D 2 7 12.078 0.0 0.0 1.1519 0.0 0.0 692.3140047183498 125.0723818414672 817.386386559817 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}D 1.1519 - 67 + 1 2.337 116356.2 0.5 1987 4227 6211 HBL1_DMSO_200M_050219_2,6216 HBL1_DMSO_200M_050219_2,6216,PFIYGDIPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6218 32.631 603.0 325420.0 25 0 23879.0 + 35764 SVIKELRKA 9 187 348.5569602737142 1042.6490514213426 3 348.5568725466728 MULTI CID FTMS 0 0 0 6217 143564.40625 0.0362968825610917 10 -0.4475326538085937 1 Unmodified _SVIKELRKA_ ENSG00000204899|ENST00000377818|MZT1 32.78568957990786 0.1150597335874693 4 [VS]{I|L}KE 5 4 57.773 0.0 0.0 5.541 0.0 0.0 0.0 483.30704370770553 483.30704370770553 47.9402281476392 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3252574989159953 0.4247425010840047 + [VS]{I|L}KE 5.541 + + 80 + 1 2.337 161724.6 1.0 1988 4228 6217 HBL1_DMSO_200M_050219_2,6218 HBL1_DMSO_200M_050219_2,6218,SVIKELRKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6219 32.64 499.0 224320.0 25 0 24453.0 38016 TPAFFSQTPI 10 115 554.7891664953711 1107.563780057542 2 554.7885009646416 MULTI CID FTMS 0 0 0 6217 184714.296875 0.1070829322684034 -9 0.2751502990722656 2 Unmodified _TPAFFSQTPI_ ENSG00000158711|ENST00000357992|ELK4 14.40537977576856 0.6058337302021266 4 TP{M(Oxidation (M))|F}KH 5 7 35.119 0.0 0.0 3.1709 0.0 0.0 0.0 494.2467135065063 494.2467135065063 -3.18810092756425 0.0 -3.18810092756425 0.0 0 0.218765315847925 1.6989700043360187 0.0 0.0 TP{M(Oxidation (M))|F}KH 3.1709 - 465 + 1 2.337 88134.8 1.0 1989 4228 6217 HBL1_DMSO_200M_050219_2,6219 HBL1_DMSO_200M_050219_2,6219,TPAFFSQTPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6220 32.65 594.0 128500.0 25 0 6894.2 + 26062 NMVAKVDEV 9 118 510.7545082292453 1019.4944635252906 2 510.7549926638603 MULTI CID FTMS 0 0 0 6217 144450.546875 0.3390591028156308 -7 0.2293205261230468 3 Oxidation (M) _NM(Oxidation (M))VAKVDEV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 41.95555342248728 0.0647214845423414 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VA[WR]EV 8 3 + 44.965 0.0 0.0 4.4105 4.4105 81.228 0.0 0.0 0.0 20.90062738113217 7.900919768595038 7.900919768595038 12.25772496747986 0 1.7302046884880935 0.0 0.805462187404089 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VA[WR]EV;[{M(Oxidation (M))|F}V]NA[WR]EV;[KA]VVD{M(Oxidation (M))|F}N{NN|[MP]|[D{I|L}]|[EV]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VA[WR]{NN|[MP]|[D{I|L}]|[EV]};[KA]VDV{M(Oxidation (M))|F}N{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]GGA[WR]EV;[KA]VVD{M(Oxidation (M))|F}GG{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}[KG]V{M(Oxidation (M))|F}N{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}[RK]{M(Oxidation (M))|F}N{NN|[MP]|[D{I|L}]|[EV]};[KA]VDV{M(Oxidation (M))|F}GG{NN|[MP]|[D{I|L}]|[EV]} 4.4105;3.2082;2.9222;2.6414;2.6269;2.2997;2.019;1.8224;1.7775;1.7237 -;-;-;-;-;-;-;-;-;- 452 + 1 2.337 64565.2 1.0 1990 4228 6217 HBL1_DMSO_200M_050219_2,6220 HBL1_DMSO_200M_050219_2,6220,NMVAKVDEV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6222 32.655 31.0 2214800.0 25 0 345680.0 + 24270 MAPPPPRSV 9 62 476.256952162498 950.499351391796 2 476.2576476931572 MULTI CID FTMS 0 0 0 6221 1614439.0 0.2127350699337788 17 -1.056621551513672 1 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 4 {[DS]|[MA]|[CV]|TT}PPP 5 4 43.244 0.0 0.0 4.5496 0.0 0.0 0.0 454.2435701959594 454.2435701959594 36.25447181216778 0.0 0.0 0.0 0 0.7302046884880937 1.5228787452803376 0.0 0.0 + {[DS]|[MA]|[CV]|TT}PPP 4.5496 + + 43 + 1 2.337 60174.6 1.0 1991 4229 6221 HBL1_DMSO_200M_050219_2,6222 HBL1_DMSO_200M_050219_2,6222,MAPPPPRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6223 32.666 686.0 230070.0 25 0 18188.0 + 13138 HFIEKAHTL 9 158 365.8692653838752 1094.5859667518257 3 365.8695556521416 MULTI CID FTMS 0 0 0 6221 103802.390625 0.0312816307675779 14 -0.8263130187988281 2 Unmodified _HFIEKAHTL_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19762333-19763700:-|nuORF;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 83.42873516780209 0.0166860047644719 4 {I|L}H{M(Oxidation (M))|F}EKAHT{I|L} 9 2 + 56.67 0.0 0.0 5.1773 5.1773 70.078 0.0 0.0 0.0 22.03015186875664 5.54576644454535 5.54576644454535 0.796896906561031 0 1.242992819099939 0.0 1.841129063296272 0.0 {I|L}H{M(Oxidation (M))|F}EKAHT{I|L};{I|L}{M(Oxidation (M))|F}HEKAHT{I|L};{I|L}{M(Oxidation (M))|F}H{M(Oxidation (M))|F}K[YQ]{I|L};{I|L}{M(Oxidation (M))|F}H{M(Oxidation (M))|F}K[Q{I|L}]Y;{I|L}{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L}[KG]S{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L}[KQ]Y;{I|L}{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L}[KG]{M(Oxidation (M))|F}S;{I|L}{M(Oxidation (M))|F}KQR[YQ]{I|L};{I|L}{M(Oxidation (M))|F}QQR[YQ]{I|L};{I|L}{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L}[KG]AY 5.1773;5.1045;4.306;4.2062;3.9481;3.8701;3.6437;3.595;3.595;3.5483 -;-;-;-;-;-;-;-;-;- 2510 + 1 2.337 131240.4 1.0 1992 4229 6221 HBL1_DMSO_200M_050219_2,6223 HBL1_DMSO_200M_050219_2,6223,HFIEKAHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6224 32.668 40.0 1940100.0 25 0 418210.0 + 5057 DGYEQAARV 9 82 504.7409398526873 1007.4673267721746 2 504.7409240603447 MULTI CID FTMS 0 0 0 6221 1009431.5 0.0034610805239864 -8 0.2627906799316406 3 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 53.832793166522166 0.0319663582346103 4 [DG]YEQAARV 9 0 + 64.914 0.0 0.0 6.4433 6.4433 87.369 0.0 0.0 0.0 47.423080162145794 9.0678223540095 9.0678223540095 9.208187539523747 0 0.9802046884880936 0.6575773191777937 0.4247425010840047 0.6109243748081782 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YEQ[R{I|L}]Q;[DG]YEV[NG]RV;[DG]YV[DN]ARV;[DG]YE[AG][R{I|L}]Q;[DG]YVE[NG]RV 6.4433;5.5293;4.6171;4.5821;3.8643;3.6978;3.5655 +;-;-;-;-;-;- + 253 + 1 2.337 67262.0 1.0 1993 4229 6221 HBL1_DMSO_200M_050219_2,6224 HBL1_DMSO_200M_050219_2,6224,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6225 32.669 80.0 1516900.0 25 0 386910.0 + 19174 LEEIIYKEL 9 65 575.3223744938439 1148.6301960544877 2 575.3226196169853 MULTI CID FTMS 0 0 0 6221 753277.8125 0.3940466303554704 -6 0.1793556213378906 4 Unmodified _LEEIIYKEL_ REV__ENSG00000196305|ENST00000443024|IARS1 10.150570793230772 0.5619192000662246 4 {I|L}{M(Oxidation (M))|F} 2 -1 20.969 0.0 0.0 1.8256 0.0 0.0 0.0 885.4672526298842 885.4672526298842 13.737125054200234 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.8256 - 24 + 1 2.337 95205.7 1.0 1994 4229 6221 HBL1_DMSO_200M_050219_2,6225 HBL1_DMSO_200M_050219_2,6225,LEEIIYKEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6226 32.679 543.0 352110.0 25 0 40898.0 -1 0 128 403.2381963372889 402.2309198706889 1 404.2466613650322 MULTI CID FTMS 0 0 0 6221 107093.40625 0.3915949311661431 -10 0.3086204528808594 5 4 Q 1 -1 10.089 0.0 0.0 2.5082 0.0 0.0 256.1617040277186 0.0 256.1617040277186 0.0 2.887458999186128 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 2.5082 - 24 + 1 2.337 151471.6 1.0 1995 4229 6221 HBL1_DMSO_200M_050219_2,6226 HBL1_DMSO_200M_050219_2,6226, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6228 32.684 23.0 3654100.0 25 0 532410.0 27513 PKLPPRGVG 9 73 307.5275544155195 919.5608338467584 3 307.5272094607353 MULTI CID FTMS 0 0 0 6227 2509354.25 0.4134020300956695 -10 0.3143196105957031 1 Unmodified _PKLPPRGVG_ ENSG00000169184|ENST00000302326|MN1 10.823927491677226 0.5436922275383211 4 {I|L}[KP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P 7 6 22.223 0.0 0.0 2.4167 0.0 0.0 0.0 125.07235132388908 125.07235132388908 16.738569581344507 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.4247425010840047 {I|L}[KP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P 2.4167 - 32 + 1 2.337 73011.2 1.0 1996 4230 6227 HBL1_DMSO_200M_050219_2,6228 HBL1_DMSO_200M_050219_2,6228,PKLPPRGVG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6229 32.69 317.0 263990.0 25 0 108380.0 + 6298 DVDVEDDAR 9 97 345.15227063131465 0 345.1521789431572 PEAK CID FTMS 0 0 0 6227 224828.28125 0.6659693640420484 -6 0.1901283264160156 2 Unmodified _DVDVEDDAR_ REV__ENSG00000166598|ENST00000299767|HSP90B1;REV__ENST00000548462.5_1_12:104324233-104336580:+|nuORF;REV__ENST00000548622.1_1_12:104324188-104325414:+|nuORF 2.498486711656943 0.3444685223463734 4 GTD 3 -1 3.0648 0.0 0.0 0.44528 0.0 0.0 344.11397622181056 68.05134760074452 412.1653238225551 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 GTD 0.44528 - 14 + 1 2.337 73085.4 1.0 1997 4230 6227 HBL1_DMSO_200M_050219_2,6229 HBL1_DMSO_200M_050219_2,6229,DVDVEDDAR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6231 32.694 67.0 597780.0 25 0 74453.0 31409 RPGAPCKG 8 71 393.2085570700276 784.4025612068551 2 393.7086364626884 MULTI CID FTMS 0 0 0 6230 582583.9375 0.96618437656192 4 -0.1191520690917968 1 Unmodified _RPGAPCKG_ nc|ENSG00000234608|Q8N8E1|MAPKAPK5-AS1 0.0 0.8243325171867699 4 {I|L} 1 8 15.485 0.0 0.0 1.9741 0.0 0.0 653.3074664576349 0.0 653.3074664576349 0.0 5.026975159433532 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.9741 - 31 + 1 2.337 38772.7 1.0 1998 4231 6230 HBL1_DMSO_200M_050219_2,6231 HBL1_DMSO_200M_050219_2,6231,RPGAPCKG False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 6232 32.698 163.0 551100.0 25 0 76630.0 + 21601 LPKPPGRGV 9 92 460.78720631801633 919.5598597028328 2 460.7873107790947 MULTI CID FTMS 0 0 0 6230 435884.125 0.3502216232768869 -10 0.3025550842285156 2 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 20.453626601364224 0.2830276176381075 4 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG 8 5 61.965 0.0 0.0 6.7386 0.0 0.0 0.0 68.05133234195546 68.05133234195546 49.74673202085111 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.0 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG 6.7386 - 88 + 1 2.337 73637.1 1.0 1999 4231 6230 HBL1_DMSO_200M_050219_2,6232 HBL1_DMSO_200M_050219_2,6232,LPKPPGRGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6233 32.7 111.0 455930.0 25 0 38851.0 -1 MPPPPPQGV 9 81 468.236188042907 934.457823152614 2 468.2367126345634 MULTI CID FTMS 0 0 0 6230 430909.75 0.2482546341268799 34 -1.530437469482422 3 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 26.34127834903884 0.1960301806784604 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 5 -1 14.781 0.0 0.0 1.5818 0.0 0.0 0.0 396.1875221584245 396.1875221584245 0.8019813526458108 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.5 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 1.5818 + + 89 1 2.337 43470.4 1.0 2000 4231 6230 HBL1_DMSO_200M_050219_2,6233 HBL1_DMSO_200M_050219_2,6233,MPPPPPQGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6234 32.714 800.0 134080.0 25 0 6323.9 -1 IRCNGLMMNAF 11 94 663.8069297097319 1325.5993064862637 2 663.8077880740166 MULTI CID FTMS 0 0 0 6230 157883.609375 0.3574161143714474 8 -0.4230499267578125 4 Carbamidomethyl (C) _IRC(Carbamidomethyl (C))NGLMMNAF_ ENSG00000058335|ENST00000558480|RASGRF1;ENST00000560334.5_1_15:79271198-79356973:-|nuORF;nc|ENSG00000058335|Q13972|RASGRF1 24.020572477871973 0.5281922720044371 4 {[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F} 13 -1 + 98.617 0.0 0.0 7.4395 7.4395 85.083 0.0 0.0 0.0 20.62147906748844 16.642078980768062 16.642078980768062 4.528937514676485 0 0.3054621874040891 1.3979400086720375 0.3054621874040891 2.23239816956497 {[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}GQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}A[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}GQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}GQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}GQ[AG]NA{M(Oxidation (M))|F} 7.4395;7.0978;6.9477;6.7551;6.7551;6.7551;6.708;6.606;6.4134;6.4134 -;-;-;-;-;-;-;-;-;- 1194 1 2.337 81038.9 0.6000000238418579 2001 4231 6230 HBL1_DMSO_200M_050219_2,6234 HBL1_DMSO_200M_050219_2,6234,IRCNGLMMNAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6235 32.72 325.0 342880.0 25 0 35064.0 + 36226 SVYPPPPEK 9 113 507.2702726657104 1012.5259923982208 2 507.2704040408134 MULTI CID FTMS 0 0 0 6230 151289.421875 0.5567899692591712 -4 0.103668212890625 5 Unmodified _SVYPPPPEK_ REV__ENSG00000104341|ENST00000521545|LAPTM4B;REV__nc|ENSG00000104341|Q86VI4|LAPTM4B 14.838274106304384 0.4350285940865338 4 [VS]Y[KP]AYSV 9 -1 + 34.611 0.0 0.0 3.4183 3.4183 77.781 0.0 0.0 0.0 20.4422170121918 4.390986860449637 4.390986860449637 11.757568812382845 0 0.3990769156097178 2.0 0.9247425010840048 0.0 [VS]Y[KP]AYSV;[VS][RK]MY{[ET]|[MV]};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[KP]AYSV;[VP][KT]AMH{[ET]|[MV]};[PS][K{I|L}]AMH{[ET]|[MV]};[VS][RK][NS][WH] 3.4183;2.2571;0.85257;0.40217;0.2394;0.16517 -;-;-;-;-;- 512 1 2.337 89573.0 1.0 2002 4231 6230 HBL1_DMSO_200M_050219_2,6235 HBL1_DMSO_200M_050219_2,6235,SVYPPPPEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6237 32.736 800.0 165750.0 25 0 8898.9 + + 10661 MPPAPPPPPPQN 12 114 620.3133317599178 1238.6121105866357 2 620.3133422732353 MULTI CID FTMS 0 0 0 6236 147036.71875 0.3302317270210255 -13 0.3781394958496094 1 Unmodified _FVQLCPYKGQG_ ENST00000413725.5_1_11:64533292-64535069:-|nuORF;ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-7|SF1 21.53697664764585 0.586507868110548 4 {[HG]|PP}AMPPPPPPQN 12 -1 {[HG]|PP}AM + + 83.403 11.427 2.8842 6.7336 6.7336 59.469 0.0 0.0 0.0 0.0 65.44415214778299 0.0 0.0 0 2.774227503252014 0.0 0.0 1.9846368802282013 {[HG]|PP}AMPPPPPPQN 6.7336 - 2277 + 1 2.337 100961.1 0.6200000047683716 2003 4232 6236 HBL1_DMSO_200M_050219_2,6237 HBL1_DMSO_200M_050219_2,6237,FVQLCPYKGQG False False MPPAPPPPPPQN 32.735653 620.313342273235 170387728.0 6236.0 ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;ENSG00000168066|ENST00000377390|SF1;;nc|ENSG00000168066|Q15637-7|SF1 5.656145970026652 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6238 32.745 534.0 216330.0 25 0 44167.0 12044 GQDLHQYITEV 11 95 434.8819719445425 0 434.8822509646416 PEAK CID FTMS 0 0 0 6236 153046.46875 0.6310280979293784 23 -1.2951507568359375 2 Unmodified _GQDLHQYITEV_ ENSG00000160145|ENST00000682506|KALRN;ENST00000393501.5_1_3:124103736-124207203:+|nuORF;nc|ENSG00000160145|O60229-2|KALRN;nc|ENSG00000160145|O60229|KALRN 5.731851221503515 0.47618401536486 4 {I|L} 1 10 2.4743 0.0 0.0 0.28513 0.0 0.0 170.51135103893574 581.1321505182249 751.6435015571606 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.28513 + + 2 + 1 2.337 94668.5 1.0 2004 4232 6236 HBL1_DMSO_200M_050219_2,6238 HBL1_DMSO_200M_050219_2,6238,GQDLHQYITEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6239 32.75 281.0 267890.0 25 0 36594.0 28004 PMNKIPKD 8 98 471.7566710214138 941.4987891096276 2 471.7570983767509 MULTI CID FTMS 0 0 0 6236 140776.0 0.5050294060273948 18 -1.1683578491210938 3 Unmodified _PMNKIPKD_ ENSG00000102763|ENST00000379310|VWA8;nc|ENSG00000102763|A3KMH1-3|VWA8 24.67388899826682 0.525179942228231 4 MP 2 6 44.464 0.0 0.0 4.7227 0.0 0.0 0.0 710.3841437372164 710.3841437372164 33.62649471529184 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 MP 4.7227 - 79 + 1 2.337 64600.6 1.0 2005 4232 6236 HBL1_DMSO_200M_050219_2,6239 HBL1_DMSO_200M_050219_2,6239,PMNKIPKD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6241 32.755 82.0 856270.0 25 0 135670.0 + 21864 LPPEQRQSI 9 74 534.2951098195646 1066.575666705929 2 534.2952758669853 MULTI CID FTMS 0 0 0 6240 960674.4375 0.7319431953690618 -3 0.071014404296875 1 Unmodified _LPPEQRQSI_ ENSG00000101811|ENST00000372972|CSTF2;ENSG00000177613|ENST00000331173|CSTF2T;nc|ENSG00000101811|P33240-2|CSTF2 16.149105407346934 0.3995459350917656 4 {I|L}PPEP 5 5 62.206 0.0 0.0 5.8323 0.0 0.0 0.0 530.2757662408811 530.2757662408811 55.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPEP 5.8323 - 21 + 1 2.337 63433.9 1.0 2006 4233 6240 HBL1_DMSO_200M_050219_2,6241 HBL1_DMSO_200M_050219_2,6241,LPPEQRQSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6242 32.759 247.0 339800.0 25 0 37508.0 + 26139 NPSMPQRTV 9 112 515.25975250221 1028.5049520712198 2 515.2609130740166 MULTI CID FTMS 0 0 0 6240 215541.953125 0.0363924881150157 17 -1.1377525329589844 2 Unmodified _NPSMPQRTV_ ENSG00000197943|ENST00000564138|PLCG2 33.4449034751529 0.1114409586740657 4 [NP]S 3 6 44.371 0.0 0.0 4.3141 0.0 0.0 0.0 727.3540175831916 727.3540175831916 33.11145429996652 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.5 0.6694451763165201 + [NP]S 4.3141 + + 123 1 2.337 67380.3 1.0 2007 4233 6240 HBL1_DMSO_200M_050219_2,6242 HBL1_DMSO_200M_050219_2,6242,NPSMPQRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6243 32.765 304.0 372200.0 25 0 32653.0 + -1 VDECGHGSSV 10 85 523.7141976141774 1045.4138422951546 2 523.7145873904228 MULTI CID FTMS 0 0 0 6240 219251.734375 0.071542387632026 -4 0.1001243591308593 3 Carbamidomethyl (C) _VDEC(Carbamidomethyl (C))GHGSSV_ REV__ENSG00000142449|ENST00000600128|FBN3 14.838274106304384 0.5985701837916485 4 ARAV 4 -1 21.899 0.0 0.0 2.0947 0.0 0.0 630.160712267614 0.0 630.160712267614 0.0 3.315016636499024 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 ARAV 2.0947 - 69 + 1 2.337 92408.3 1.0 2008 4233 6240 HBL1_DMSO_200M_050219_2,6243 HBL1_DMSO_200M_050219_2,6243,VDECGHGSSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6244 32.774 528.0 253350.0 25 0 18474.0 + 4861 DGAPPPNQI 9 140 454.7266376347831 907.4387223363664 2 454.7274047732353 MULTI CID FTMS 0 0 0 6240 170814.078125 0.1598337025518182 20 -1.2122688293457031 4 Unmodified _DGAPPPNQI_ ENSG00000184007|ENST00000647444|PTP4A2;ENST00000532001.6_1_1:32374455-32378590:-|nuORF;nc|ENSG00000184007|Q12974-3|PTP4A2;nc|ENSG00000184007|Q12974-4|PTP4A2 63.960520009940105 0.0238892913700936 4 ENPP[NP]Q{I|L} 8 3 + 58.769 0.0 0.0 6.4764 6.4764 88.45 0.0 0.0 0.0 30.188076517011304 0.5375674101351464 0.5375674101351464 9.444826721501691 0 1.113982988912431 1.3010299956639813 0.0 1.3807196863200843 ENPP[NP]Q{I|L};ENPP[NP]{I|L}Q;ENPP[NP][AG]{I|L};ENPP[NP]AAV;EGGPP[NP]Q{I|L};EGGPP[NP]{I|L}Q;E{[HG]|PP}N[NP]Q{I|L};E{[HG]|PP}N[NP]{I|L}Q 6.4764;5.4356;5.0973;4.7199;4.022;2.9812;1.2622;0.22141 -;-;-;-;-;-;-;- 385 + 1 2.337 104981.2 1.0 2009 4233 6240 HBL1_DMSO_200M_050219_2,6244 HBL1_DMSO_200M_050219_2,6244,DGAPPPNQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6245 32.785 597.0 234070.0 25 0 57220.0 + 14040 IAKIQQSTV 9 137 494.296029607877 986.577506282554 2 494.2957031130791 MULTI CID FTMS 0 0 0 6240 134009.515625 0.0936531295089753 -4 0.1001243591308593 5 Unmodified _IAKIQQSTV_ ENSG00000105851|ENST00000496166|PIK3CG 53.832793166522166 0.0319663582346103 4 {I|L}A 2 7 39.693 0.0 0.0 4.0233 0.0 0.0 0.0 799.4371372290593 799.4371372290593 8.04445298187133 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + {I|L}A 4.0233 + + 648 + 1 2.337 107967.2 1.0 2010 4233 6240 HBL1_DMSO_200M_050219_2,6245 HBL1_DMSO_200M_050219_2,6245,IAKIQQSTV True True IAKIQQSTV 32.784556 494.295703113079 16761658.0 6240.0 ENSG00000105851|ENST00000496166|PIK3CG 4.743236382802327 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6246 32.798 800.0 81456.0 25 0 6285.9 -1 0 91 628.888565881189 3139.406447072945 5 629.0900756716728 MULTI CID FTMS 0 0 0 6240 104011.953125 0.4683007518543099 7 -0.4039230346679687 6 4 WG{M(Oxidation (M))|F} 3 -1 10.177 0.0 0.0 0.32418 0.0 0.0 1493.6786798371854 1252.5510197840429 2746.229699621228 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WG{M(Oxidation (M))|F} 0.32418 - 161 + 1 2.337 55382.8 0.4699999988079071 2011 4233 6240 HBL1_DMSO_200M_050219_2,6246 HBL1_DMSO_200M_050219_2,6246, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6248 32.805 194.0 369850.0 25 0 63265.0 + 41552 VPPDTRNVV 9 68 498.77759939018216 995.5406458471645 2 498.7775146365166 MULTI CID FTMS 0 0 0 6247 405440.75 0.5685406300399842 -8 0.2383003234863281 1 Unmodified _VPPDTRNVV_ ENSG00000275835|ENST00000615383|TUBGCP5;nc|ENSG00000275835|Q96RT8-2|TUBGCP5 12.240655878213236 0.5053430591993562 4 VPPD 4 5 56.186 0.0 0.0 5.6437 0.0 0.0 0.0 584.3176563437918 584.3176563437918 47.60213141451892 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VPPD 5.6437 + + 27 + 1 2.322 62771.1 1.0 2012 4234 6247 HBL1_DMSO_200M_050219_2,6248 HBL1_DMSO_200M_050219_2,6248,VPPDTRNVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6249 32.809 201.0 471660.0 25 0 82964.0 -1 0 105 337.6793378319548 673.3441227307096 2 337.6787902712822 MULTI CID FTMS 0 0 0 6247 295780.34375 0.6980635444065653 -1 0.0479621887207031 2 4 {[VA]|[{I|L}G]}PYPQ 6 -1 {[VA]|[{I|L}G]}P + + 30.674 22.676 8.4879 4.5555 4.5555 50.709 0.0 0.0 0.0 0.0 7.998037644757048 0.0 0.0 0 0.25 0.0 0.0 0.6747425010840047 {[VA]|[{I|L}G]}PYPQ 4.5555 - 51 + 1 2.322 83463.0 1.0 2013 4234 6247 HBL1_DMSO_200M_050219_2,6249 HBL1_DMSO_200M_050219_2,6249, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6251 32.814 129.0 458310.0 25 0 90132.0 -1 0 76 448.2752527161979 447.2679762495979 1 448.2752258181572 MULTI CID FTMS 0 0 0 6250 549116.375 0.2520976425716911 -4 0.1191520690917968 1 4 {I|L} 1 -1 0.71334 0.0 0.0 0.15949 0.0 0.0 265.1255487367057 66.03578363590077 331.16133237260647 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.15949 - 6 + 1 2.322 51358.5 1.0 2014 4235 6250 HBL1_DMSO_200M_050219_2,6251 HBL1_DMSO_200M_050219_2,6251, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6252 32.817 148.0 224780.0 25 0 31488.0 + 8360 ESCEYPKEGSR 11 58 642.7793869383845 1283.544220943569 2 642.7789184451103 MULTI CID FTMS 0 0 0 6250 404574.6875 0.3213570021298382 -3 0.0893974304199218 2 Unmodified _ESCEYPKEGSR_ REV__ENSG00000274349|ENST00000621410|ZNF658;REV__ENST00000377618.4_9:39444499-39464431:-|nuORF;REV__ENST00000602828.1_9:39444499-39446956:-|nuORF;REV__nc|ENSG00000198416|Q4V348|ZNF658B 4.897010918128616 0.8520435188433833 4 YEQAA[RV] 7 -1 42.039 0.0 0.0 3.2752 0.0 0.0 448.1256551250127 0.0 448.1256551250127 0.0 38.05925402426212 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3807196863200844 YEQAA[RV] 3.2752 - 60 + 1 2.322 30493.4 1.0 2015 4235 6250 HBL1_DMSO_200M_050219_2,6252 HBL1_DMSO_200M_050219_2,6252,ESCEYPKEGSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6253 32.82 190.0 382580.0 25 0 57533.0 -1 KMSHCNDF 8 84 527.7074344271591 1053.400315921118 2 527.7076904177666 MULTI CID FTMS 0 0 0 6250 429900.65625 1.0 0 0.0 3 Carbamidomethyl (C),Oxidation (M) _KM(Oxidation (M))SHC(Carbamidomethyl (C))NDF_ ENST00000319653.13_1_1:240637457-240637514:+|nuORF 24.020572477871973 0.5389365498350341 4 ESS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5 -1 36.466 0.0 0.0 3.4617 0.0 0.0 475.167772361525 0.0 475.167772361525 0.0 15.496812376923046 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 ESS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.4617 - 67 1 2.322 59854.1 1.0 2016 4235 6250 HBL1_DMSO_200M_050219_2,6253 HBL1_DMSO_200M_050219_2,6253,KMSHCNDF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6254 32.826 286.0 306520.0 25 0 34748.0 -1 MEYVNDFDLM 10 75 654.7572437872857 1307.4999346413713 2 654.7578613162041 MULTI CID FTMS 0 0 0 6250 336511.09375 0.8562303934435015 -2 0.0587921142578125 4 2 Oxidation (M) _M(Oxidation (M))EYVNDFDLM(Oxidation (M))_ ENSG00000129535|ENST00000561028|NRL;ENSG00000178573|ENST00000326043|MAF;nc|ENSG00000178573|O75444|MAF 5.731851221503515 0.7001233259664787 4 EQAA[RV] 6 -1 30.406 0.0 0.0 2.3255 0.0 0.0 635.1437467525026 0.0 635.1437467525026 0.0 3.719005324262241 0.0 0.0 0 0.0 0.0 0.5 0.3494850021680094 EQAA[RV] 2.3255 - 148 + 1 2.322 69046.4 1.0 2017 4235 6250 HBL1_DMSO_200M_050219_2,6254 HBL1_DMSO_200M_050219_2,6254,MEYVNDFDLM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6255 32.831 303.0 593070.0 25 0 145110.0 -1 MFNYCSQLED 10 57 661.7524448809684 1321.4903368287366 2 661.7520019412041 MULTI CID FTMS 0 0 0 6250 259693.125 0.342889722864456 -3 0.0893974304199218 5 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FNYC(Carbamidomethyl (C))SQLED_ ENSG00000166159|ENST00000299194|LRTM2;LRTM2|p.K348Sfs*5|1|0.32|ENSG00000166159|chr12:1834647-1834647|A/-|frameshift_variant 8.155526934196011 0.6889124077178598 4 DVEE 4 -1 19.737 0.0 0.0 1.4935 0.0 0.0 831.3189760869468 0.0 831.3189760869468 0.0 2.7422750325201406 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 DVEE 1.4935 - 22 1 2.322 132798.2 1.0 2018 4235 6250 HBL1_DMSO_200M_050219_2,6255 HBL1_DMSO_200M_050219_2,6255,MFNYCSQLED False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6256 32.834 130.0 739250.0 25 0 99870.0 + 28036 PNQSQGQGQS 10 102 515.7311500159745 1029.447747098749 2 515.7316161990166 MULTI CID FTMS 0 0 0 6250 199109.515625 0.2877413249992052 -5 0.1298065185546875 6 Unmodified _PNQSQGQGQS_ REV__ENSG00000171004|ENST00000370833|HS6ST2;REV__nc|ENSG00000171004|Q96MM7-2|HS6ST2;REV__nc|ENSG00000171004|Q96MM7-3|HS6ST2;REV__nc|ENSG00000171004|Q96MM7|HS6ST2 13.90604991867851 0.6142120002215601 4 [NP]Q 3 -1 22.051 0.0 0.0 2.142 0.0 0.0 0.0 687.2723985482208 687.2723985482208 1.0818162927846942 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.3054621874040891 [NP]Q 2.142 + + 282 1 2.322 76329.4 1.0 2019 4235 6250 HBL1_DMSO_200M_050219_2,6256 HBL1_DMSO_200M_050219_2,6256,PNQSQGQGQS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6257 32.848 800.0 165760.0 25 0 19808.0 + 6365 DVSYLCETW 9 138 558.2407240383683 1114.4668951435365 2 558.2400390505791 MULTI CID FTMS 0 0 0 6250 187011.0 0.8267424395645931 1 -0.0952301025390625 7 Unmodified _DVSYLCETW_ REV__ENSG00000141447|ENST00000319481|OSBPL1A;REV__nc|ENSG00000141447|Q9BXW6-2|OSBPL1A;REV__nc|ENSG00000141447|Q9BXW6-4|OSBPL1A 28.486842064014134 0.1687311288560894 4 [HQ]EAEGTGTW 10 -1 + 72.393 0.0 0.0 6.4958 6.4958 75.609 0.0 0.0 0.0 0.9600524337508602 9.164539485499262 0.9600524337508602 0.9600524337508602 0 1.0941876774005248 0.0 1.3494850021680094 0.1861818737241735 [HQ]EAEGTGTW;{[CP]|[EA]}HQEGTGTW;[DV][HN]EGTGTW;{[CP]|[EA]}HGAEGTGTW;{[CP]|[EA]}HQWTGTW;{[CP]|[EA]}HGAWTGTW;{[NV]|[RG]}[HD]EGTGTW;[HQ]EAWTGT{[DA]|[EG]};{[CP]|[EA]}HQTWGTW;{[SA]|[TG]}{M(Oxidation (M))|F}G[MT]GTGTW 6.4958;6.4096;6.2298;6.1893;5.8235;5.5993;5.1406;5.0834;4.9673;4.8936 -;-;-;-;-;-;-;-;-;- 1473 1 2.322 102602.1 0.7900000214576721 2020 4235 6250 HBL1_DMSO_200M_050219_2,6257 HBL1_DMSO_200M_050219_2,6257,DVSYLCETW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6258 32.862 800.0 127990.0 25 0 15407.0 + -1 CWEDERYFCYG 11 84 792.7950948423197 1583.575636751439 2 792.7961303591728 MULTI CID FTMS 0 0 0 6250 176830.671875 0.4657269107594165 -1 0.0108299255371093 8 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))WEDERYFC(Carbamidomethyl (C))YG_ REV__ENSG00000205978|ENST00000382554|NYNRIN 0.3506318815782774 0.8734936314171269 4 QAA[RV] 5 -1 17.051 0.0 0.0 1.0768 0.0 0.0 1040.261601424991 0.0 1040.261601424991 0.0 1.3380312008851547 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 QAA[RV] 1.0768 - 36 + 1 2.322 75546.2 0.7200000286102295 2021 4235 6250 HBL1_DMSO_200M_050219_2,6258 HBL1_DMSO_200M_050219_2,6258,CWEDERYFCYG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6259 32.876 800.0 249060.0 25 0 26004.0 -1 0 75 1179.8258087584848 3536.4555968756545 3 1180.493945300579 MULTI CID FTMS 0 0 0 6250 168493.640625 0.1124435425357109 -3 0.0893974304199218 9 4 YG 2 -1 9.464 0.0 0.0 0.26761 0.0 0.0 1781.6163772692785 1531.7447935775665 3313.3611708468447 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.26761 - 87 + 1 2.322 139206.6 0.5799999833106995 2022 4235 6250 HBL1_DMSO_200M_050219_2,6259 HBL1_DMSO_200M_050219_2,6259, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6260 32.889 800.0 169650.0 25 0 8255.7 + -1 CCYSTWVDSC 10 119 669.2347681559648 1336.4549833787296 2 669.2343627810478 MULTI CID FTMS 0 0 0 6250 134540.171875 0.4579226750185656 -1 0.0108299255371093 10 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))YSTWVDSC(Carbamidomethyl (C))_ REV__ENST00000579456.5_1_17:57760278-57760347:+|nuORF 1.6526216038709556 0.7189921496796233 4 EQAA[RV] 6 -1 21.374 0.0 0.0 1.5993 0.0 0.0 664.0975799784532 0.0 664.0975799784532 0.0 11.452424927286843 0.0 0.0 0 0.0 0.0 0.0 0.25 EQAA[RV] 1.5993 - 120 + 1 2.322 100515.0 0.6600000262260437 2023 4235 6250 HBL1_DMSO_200M_050219_2,6260 HBL1_DMSO_200M_050219_2,6260,CCYSTWVDSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6261 32.905 800.0 136060.0 25 0 14123.0 -1 FFMEVCDDCV 10 102 612.2259719986896 1222.437391064179 2 612.2255737185478 MULTI CID FTMS 0 0 0 6250 134848.765625 0.6350084424285822 -1 0.0108299255371093 11 Oxidation (M) _FFM(Oxidation (M))EVCDDCV_ ENSG00000110514|ENST00000706887|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6|MADD 3.944395688203298 0.708391353636983 4 YEQAARV 7 -1 40.354 0.0 0.0 3.3011 0.0 0.0 387.0186421401541 0.0 387.0186421401541 0.0 23.99774138417139 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.5866968715561641 YEQAARV 3.3011 - 144 + 1 2.322 85544.4 0.699999988079071 2024 4235 6250 HBL1_DMSO_200M_050219_2,6261 HBL1_DMSO_200M_050219_2,6261,FFMEVCDDCV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6263 32.909 5.4 10344000.0 25 0 911970.0 + + 19175 RYADRVKEL 9 66 383.8841588247727 1148.6306470745185 3 383.8840209841728 MULTI CID FTMS 0 0 0 6262 11244148.0 0.7305853273315754 1 -0.0986557006835937 1 Unmodified _LEEIIYKEL_ ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000186638|Q5T7B8-4|KIF24;nc|ENSG00000142945|Q99661-2|KIF2C;nc|ENSG00000186638|Q5T7B8-2|KIF24;ENSG00000186638|ENST00000402558|KIF24 17.44264345198275 0.3645313841742926 4 E{I|L} 2 -1 25.701 0.0 0.0 2.2375 0.0 0.0 888.495411870757 0.0 888.495411870757 0.0 18.711375162600703 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 E{I|L} 2.2375 + + 24 1 2.284 50628.1 1.0 2025 4236 6262 HBL1_DMSO_200M_050219_2,6263 HBL1_DMSO_200M_050219_2,6263,LEEIIYKEL False False RYADRVKEL 32.908692 383.884020984173 359977176.0 6262.0 ENSG00000142945|ENST00000372224|KIF2C;;nc|ENSG00000186638|Q5T7B8-4|KIF24;;nc|ENSG00000142945|Q99661-2|KIF2C;;nc|ENSG00000186638|Q5T7B8-2|KIF24;;ENSG00000186638|ENST00000402558|KIF24 5.255692323048909 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6264 32.91 14.0 2590700.0 25 0 317660.0 + 4003 DALRQTASV 9 66 480.7590939921208 959.5036350510416 2 480.7592346072197 MULTI CID FTMS 0 0 0 6262 5477414.0 1.0 0 0.0 2 Unmodified _DALRQTASV_ ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT 57.24910588100465 0.0276051374632116 4 {[DA]|[EG]}{I|L}RQTASV 9 0 + 79.606 0.0 0.0 8.2966 8.2966 92.363 0.0 0.0 0.0 19.201009673725764 16.478174818886373 16.478174818886373 9.208187539523747 0 1.305462187404089 1.5228787452803376 0.75 0.0 + + {[DA]|[EG]}{I|L}RQTASV;{[DA]|[EG]}{I|L}R[AG]TASV;[VS]{M(Oxidation (M))|F}[H{I|L}]TASV;[WR][WR]ASV;[WR][WK]ADV;[WR][Q{I|L}]QMV;[WR][Q{I|L}][AG]MV 8.2966;7.3369;6.2954;3.2573;1.7417;1.6661;0.69364 +;-;-;-;-;-;- + 147 1 2.284 35521.4 1.0 2026 4236 6262 HBL1_DMSO_200M_050219_2,6264 HBL1_DMSO_200M_050219_2,6264,DALRQTASV True True DALRQTASV 32.909869 480.75923460722 73433680.0 6262.0 ENST00000409258.2_1_2:86386442-86398424:-|nuORF;;nc|ENSG00000132305|Q16891-3|IMMT;;nc|ENSG00000132305|Q16891-4|IMMT;;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;;ENSG00000132305|ENST00000410111|IMMT;;nc|ENSG00000132305|Q16891-2|IMMT 7.641943454742432 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6265 32.911 54.0 2142500.0 25 0 642040.0 + 34324 SLSCCDGF 8 95 416.15385180395657 830.2931506747132 2 416.1540405154228 MULTI CID FTMS 0 0 0 6262 1814614.875 0.743136583194853 1 -0.0986557006835937 3 Unmodified _SLSCCDGF_ REV__ENSG00000143669|ENST00000389793|LYST;REV__ENST00000465349.5_1_1:235954948-235996891:-|nuORF;REV__ENST00000489585.5_1_1:235926109-235996891:-|nuORF;REV__nc|ENSG00000143669|Q99698-2|LYST;REV__nc|ENSG00000143669|Q99698-3|LYST 5.760428011301431 0.7893668129297577 4 {M(Oxidation (M))|F} 1 -1 13.979 0.0 0.0 1.6837 0.0 0.0 665.213467302446 0.0 665.213467302446 0.0 4.3753063169585005 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.6837 + + 43 + 1 2.284 94196.0 1.0 2027 4236 6262 HBL1_DMSO_200M_050219_2,6265 HBL1_DMSO_200M_050219_2,6265,SLSCCDGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6266 32.912 43.0 982330.0 25 0 124650.0 38017 TPAFFSQTPI 10 80 554.7891664953711 1107.563780057542 2 554.7895385622978 MULTI CID FTMS 0 0 0 6262 1525116.375 0.884143437993194 -1 0.0952301025390625 4 Unmodified _TPAFFSQTPI_ ENSG00000158711|ENST00000357992|ELK4 19.361941925380144 0.5226674314761524 4 TP{M(Oxidation (M))|F}K 4 7 43.15 0.0 0.0 3.8959 0.0 0.0 0.0 631.3131563985755 631.3131563985755 28.712600430434705 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 TP{M(Oxidation (M))|F}K 3.8959 - 34 + 1 2.284 37997.7 1.0 2028 4236 6262 HBL1_DMSO_200M_050219_2,6266 HBL1_DMSO_200M_050219_2,6266,TPAFFSQTPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6267 32.914 53.0 1225700.0 25 0 169790.0 + 24271 MAPPPPRSV 9 72 476.256952162498 950.499351391796 2 476.2583801150322 MULTI CID FTMS 0 0 0 6262 993501.8125 0.1309140063895406 24 -1.2001113891601562 5 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 12.240655878213236 0.5053430591993562 4 {[DS]|[MA]|[CV]|TT}PPP 5 4 38.869 0.0 0.0 4.0893 0.0 0.0 0.0 454.2420748346313 454.2420748346313 31.87916549520928 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + {[DS]|[MA]|[CV]|TT}PPP 4.0893 + + 75 + 1 2.284 59093.1 1.0 2029 4236 6262 HBL1_DMSO_200M_050219_2,6267 HBL1_DMSO_200M_050219_2,6267,MAPPPPRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6268 32.916 108.0 522810.0 25 0 63292.0 + 36375 SYQEHVKQL 9 104 377.86489042006 1130.57284186038 3 377.8643066287041 MULTI CID FTMS 0 0 0 6262 598548.0 0.7140659259050485 2 -0.1599159240722656 6 Unmodified _SYQEHVKQL_ ENSG00000117226|ENST00000370481|GBP3;ENSG00000162645|ENST00000370466|GBP2;nc|ENSG00000117226|Q9H0R5-4|GBP3 15.248480904072842 0.4239247793462406 4 W 1 9 11.99 0.0 0.0 1.0605 0.0 0.0 926.4816533611598 0.0 926.4816533611598 0.0 0.5697167615341847 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.0605 - 209 + 1 2.284 50086.9 1.0 2030 4236 6262 HBL1_DMSO_200M_050219_2,6268 HBL1_DMSO_200M_050219_2,6268,SYQEHVKQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6269 32.919 150.0 351440.0 25 0 26945.0 26148 NPVDAPGRPE 10 81 526.2616496625865 0 526.2615844607353 PEAK CID FTMS 0 0 0 6262 582889.25 0.2059579442657772 -3 0.154022216796875 7 Unmodified _NPVDAPGRPE_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN 8.155526934196011 0.3888059682493408 4 A 1 9 5.4846 0.0 0.0 0.52209 0.0 0.0 524.2222606515417 452.2160738580688 976.4383345096104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.52209 + + 13 + 1 2.284 48399.4 1.0 2031 4236 6262 HBL1_DMSO_200M_050219_2,6269 HBL1_DMSO_200M_050219_2,6269,NPVDAPGRPE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6270 32.928 529.0 219570.0 25 0 21898.0 + 36373 SYQEHVKQL 9 139 566.2932303757918 1130.5719078183836 2 566.2927734255791 MULTI CID FTMS 0 0 0 6262 379056.96875 0.5332752334750849 2 -0.1599159240722656 8 Unmodified _SYQEHVKQL_ ENSG00000117226|ENST00000370481|GBP3;ENSG00000162645|ENST00000370466|GBP2;nc|ENSG00000117226|Q9H0R5-4|GBP3 93.44831873261192 0.0135842389052425 4 [AG]YSEHVKQ{I|L} 10 3 + 75.198 0.0 0.0 6.6513 6.6513 79.038 0.0 0.0 0.0 2.4746023770363905 2.4746023770363905 2.4746023770363905 2.4746023770363905 0 2.298455006504028 2.0 0.4247425010840047 0.0 [AG]YSEHVKQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QEHVKQ{I|L};[AG]YSEHVK[AG]{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QEHVK{I|L}Q;{[{M(Oxidation (M))|F}C]|[YS]}[AG]EHVKQ{I|L};[YQ]SEHVKQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}QEHVK[AG]{I|L};{[CT]|[{M(Oxidation (M))|F}G]}SSEHVKQ{I|L};[HV]EQYSKQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[AG]EHVK{I|L}Q 6.6513;6.4324;5.8407;5.7006;5.6179;5.5561;5.4303;5.0455;4.9748;4.8861 -;+;-;-;-;-;-;-;-;- + 3047 1 2.284 89743.4 1.0 2032 4236 6262 HBL1_DMSO_200M_050219_2,6270 HBL1_DMSO_200M_050219_2,6270,SYQEHVKQL True True SYQEHVKQL 32.928405 566.292773425579 22013272.5 6262.0 ENSG00000117226|ENST00000370481|GBP3;;nc|ENSG00000117226|Q9H0R5-4|GBP3;;ENSG00000162645|ENST00000370466|GBP2 9.817189534505207 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6271 32.939 598.0 168910.0 25 0 8850.2 + 26063 NMVAKVDEV 9 127 510.7545082292453 1019.4944635252906 2 510.7526122927666 MULTI CID FTMS 0 0 0 6262 324667.34375 0.7620699309686084 1 -0.0986557006835937 9 Oxidation (M) _NM(Oxidation (M))VAKVDEV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 69.10491478415734 0.0214449631113747 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VA[WR]EV 8 3 + 47.484 0.0 0.0 4.6576 4.6576 70.755 0.0 0.0 0.0 21.05188654682749 8.472418817627762 8.472418817627762 2.3239375982296906 0 1.274227503252014 0.0 1.5356668758921828 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VA[WR]EV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VAKVDEV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VA[WR]VE;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VAKVDVE;[KA]VDEVV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{NN|[MP]|[D{I|L}]|[EV]}DKAVV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[KA]VVDEV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[KA]VDVEV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[WE]RAVV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VKAVV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 4.6576;4.4297;3.5414;3.3135;1.8922;1.7583;1.4844;1.4844;1.4683;1.463 -;+;-;-;-;-;-;-;-;- + 1010 + 1 2.284 83631.2 1.0 2033 4236 6262 HBL1_DMSO_200M_050219_2,6271 HBL1_DMSO_200M_050219_2,6271,NMVAKVDEV True False NMVAKVDEV 32.938854 510.752612292767 6598778.5 6262.0 ENST00000478340.2_1_6:35437033-35438524:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENSG00000198755|ENST00000322203|RPL10A 8.081786632537842 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6272 32.95 631.0 267760.0 25 0 21016.0 + 31218 RLQGANTL 8 155 436.7506912491264 871.4868295650527 2 436.7493163943291 MULTI CID FTMS 0 0 0 6262 290160.0 1.0 0 0.0 10 Unmodified _RLQGANTL_ ENSG00000158711|ENST00000357992|ELK4 42.09456458481378 0.1992492688217789 4 [RV]NVGNT{I|L} 8 4 + 58.256 0.0 0.0 6.6846 6.6846 84.851 0.0 0.0 0.0 5.528871982441359 40.82177864628136 5.528871982441359 6.409780573583319 0 0.8494850021680094 0.0 0.3054621874040891 0.9361818737241736 [RV]NVGNT{I|L};[RV]NRNT{I|L};{[NV]|[RG]}RVGNT{I|L};[RV]GGVGNT{I|L};[RV]NVGGGT{I|L};{[NV]|[RG]}RRNT{I|L};[RV]GGRNT{I|L};[RV]NRGGT{I|L};{[NV]|[RG]}RVGGGT{I|L};[RV]GGVGGGT{I|L} 6.6846;5.9491;5.7663;5.6218;5.6218;5.0308;4.8785;4.8785;4.7035;4.5652 -;-;-;-;-;-;-;-;-;- 477 1 2.284 134126.7 1.0 2034 4236 6262 HBL1_DMSO_200M_050219_2,6272 HBL1_DMSO_200M_050219_2,6272,RLQGANTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6273 32.962 684.0 945960.0 25 0 47006.0 + 5082 DGYICYGQQ 9 220 349.4789650200719 1045.4150656604156 3 349.4782897830009 MULTI CID FTMS 0 0 0 6262 287751.625 0.0676897961766478 -1 0.0952301025390625 11 Unmodified _DGYICYGQQ_ REV__ENST00000417517.1_1_1:43357732-43357957:-|nuORF 23.78978130925829 0.2284941198415988 4 DGYV 4 -1 36.631 0.0 0.0 3.504 0.0 0.0 0.0 608.2126736764662 608.2126736764662 3.1613244333244666 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 DGYV 3.504 - 771 + 1 2.284 516494.1 1.0 2035 4236 6262 HBL1_DMSO_200M_050219_2,6273 HBL1_DMSO_200M_050219_2,6273,DGYICYGQQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6274 32.975 759.0 311470.0 25 0 104320.0 -1 0 75 799.7903198879494 0 799.7902709841728 PEAK CID FTMS 0 0 0 6262 230716.375 0.8677945016077813 -2 0.1060600280761718 12 4 D 1 -1 11.237 0.0 0.0 0.70339 0.0 0.0 552.1492780720172 927.3674165675228 1479.5166946395402 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D 0.70339 - 17 + 1 2.284 163853.2 1.0 2036 4236 6262 HBL1_DMSO_200M_050219_2,6274 HBL1_DMSO_200M_050219_2,6274, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6275 32.989 800.0 188920.0 25 0 10065.0 -1 0 98 874.2415257571179 4366.171246452589 5 875.0420410037041 MULTI CID FTMS 0 0 0 -1 0 13 4 PG 2 -1 10.969 0.0 0.0 0.25123 0.0 0.0 2759.392885364383 1449.674317360704 4209.067202725087 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PG 0.25123 - 24 + 1 2.284 113682.6 0.8999999761581421 2037 4236 6262 HBL1_DMSO_200M_050219_2,6275 HBL1_DMSO_200M_050219_2,6275, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6276 33.003 756.0 205090.0 25 0 28909.0 -1 CCCACQEVQT 10 100 572.6984240955511 0 572.6984741091728 PEAK CID FTMS 0 0 0 6262 141324.25 0.9426281694200952 -1 0.0952301025390625 14 Carbamidomethyl (C) _C(Carbamidomethyl (C))CCACQEVQT_ ENSG00000135637|ENST00000393965|CCDC142;nc|ENSG00000135637|Q17RM4-2|CCDC142 1.4819007175156935 0.3961065659209837 4 VD 2 -1 14.508 0.0 0.0 1.2689 0.0 0.0 97.96558909254244 828.300119128489 926.2657082210314 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 VD 1.2689 - 13 + 1 2.284 122621.6 1.0 2038 4236 6262 HBL1_DMSO_200M_050219_2,6276 HBL1_DMSO_200M_050219_2,6276,CCCACQEVQT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6278 33.007 0.21 235720000.0 25 0 55780000.0 + 5058 DGYEQAARV 9 66 504.7409398526873 1007.4673267721746 2 504.7413207888603 MULTI CID FTMS 0 0 0 6277 291652128.0 1.0 0 0.0 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 43.85829265575387 0.0542763391141878 4 [YG]DEQAA[RV] 9 2 [YG]D + + 39.13 23.543 7.0255 3.884 3.884 48.291 0.0 0.0 0.0 0.0 15.586681479559203 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.7742275032520141 [YG]DEQAA[RV] 3.884 - 64 + 1 2.213 44325.4 1.0 2039 4237 6277 HBL1_DMSO_200M_050219_2,6278 HBL1_DMSO_200M_050219_2,6278,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6279 33.009 14.0 4714100.0 25 0 704830.0 27514 PKLPPRGVG 9 66 307.5275544155195 919.5608338467584 3 307.5273925662041 MULTI CID FTMS 0 0 0 6277 4417469.0 0.7277532267453618 -3 0.2047157287597656 2 Unmodified _PKLPPRGVG_ ENSG00000169184|ENST00000302326|MN1 10.823927491677226 0.5436922275383211 4 PP 2 7 10.969 0.0 0.0 1.1929 0.0 0.0 338.2308056549138 384.2000826471313 722.4308883020451 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + PP 1.1929 + + 14 + 1 2.213 57724.5 1.0 2040 4237 6277 HBL1_DMSO_200M_050219_2,6279 HBL1_DMSO_200M_050219_2,6279,PKLPPRGVG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6280 33.011 120.0 800770.0 25 0 119180.0 + 21602 LPKPPGRGV 9 77 460.78720631801633 919.5598597028328 2 460.7874328494072 MULTI CID FTMS 0 0 0 6277 1237213.5 0.9940690551877264 -4 0.2526779174804687 3 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 32.30548876998284 0.1201446275138228 4 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG 8 5 63.805 0.0 0.0 6.9387 0.0 0.0 0.0 68.05139337711171 68.05139337711171 56.81540340012745 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.3494850021680094 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PG 6.9387 - 112 + 1 2.213 77845.5 1.0 2041 4237 6277 HBL1_DMSO_200M_050219_2,6280 HBL1_DMSO_200M_050219_2,6280,LPKPPGRGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6281 33.017 350.0 665560.0 25 0 152320.0 + -1 LRMASRLMR 9 111 575.3223744938439 1148.6301960544877 2 575.3240844607353 MULTI CID FTMS 0 0 0 6277 624394.3125 0.3266264726916347 2 -0.1100120544433593 4 Oxidation (M) _LRM(Oxidation (M))ASRLMR_ REV__ENSG00000105552|ENST00000316273|BCAT2;REV__ENST00000595376.1_1_19:49302930-49310451:-|nuORF;REV__nc|ENSG00000105552|O15382-2|BCAT2 14.838274106304384 0.4350285940865338 4 [VG]YAD 5 -1 32.932 0.0 0.0 2.8671 0.0 0.0 0.0 640.3797575343905 640.3797575343905 -3.734109574468661 0.0 -3.734109574468661 0.0 0 0.8494850021680094 1.5228787452803376 0.0 0.0 [VG]YAD 2.8671 - 260 + 1 2.213 176315.4 1.0 2042 4237 6277 HBL1_DMSO_200M_050219_2,6281 HBL1_DMSO_200M_050219_2,6281,LRMASRLMR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6282 33.026 475.0 257300.0 25 0 20821.0 + 29848 QQNDQFQKV 9 140 567.7808629920119 1133.5471730508236 2 567.7827636599541 MULTI CID FTMS 0 0 0 6277 362920.28125 1.0 0 0.0 5 Unmodified _QQNDQFQKV_ ENSG00000134759|ENST00000358232|ELP2;ENST00000536373.5_1_18:33718798-33725056:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2 122.17920374332846 0.0007092405233684 4 QQNDQ{M(Oxidation (M))|F}QKV 9 0 + 58.848 0.0 0.0 5.1915 5.1915 73.472 0.0 0.0 0.0 5.642492736872597 2.659167939666318 2.659167939666318 2.659167939666318 0 1.3388903526330402 0.0 0.0 1.8169015600442573 + + QQNDQ{M(Oxidation (M))|F}QKV;QQNDQ{M(Oxidation (M))|F}QVK;[AG]QND{M(Oxidation (M))|F}QQKV;QQND[AG]{M(Oxidation (M))|F}QKV;QQNDQ{M(Oxidation (M))|F}[AG]KV;QQGGDQ{M(Oxidation (M))|F}QKV;[AG]DNQ{M(Oxidation (M))|F}QQKV;QQGGDQ{M(Oxidation (M))|F}QVK;QQNDQ{M(Oxidation (M))|F}[AG]VK;QQND[AG]{M(Oxidation (M))|F}QVK 5.1915;4.9569;4.3811;4.3792;4.3792;4.3792;4.2201;4.1446;4.1446;4.1446 +;-;-;-;-;-;-;-;-;- + 1773 + 1 2.213 95101.4 1.0 2043 4237 6277 HBL1_DMSO_200M_050219_2,6282 HBL1_DMSO_200M_050219_2,6282,QQNDQFQKV True True QQNDQFQKV 33.025764 567.782763659954 2897082.5 6277.0 nc|ENSG00000134759|Q6IA86-3|ELP2;;nc|ENSG00000134759|Q6IA86-4|ELP2;;nc|ENSG00000134759|Q6IA86-5|ELP2;;ENST00000536373.5_1_18:33718798-33725056:+|nuORF;;ENSG00000134759|ENST00000358232|ELP2;;nc|ENSG00000134759|Q6IA86-6|ELP2;;nc|ENSG00000134759|Q6IA86-2|ELP2 6.347367127736409 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6283 33.035 505.0 570190.0 25 0 132900.0 + -1 HSERMCVN 8 141 344.81547217195043 0 344.8155700564384 PEAK CID FTMS 0 0 0 6277 339434.5625 0.9185549623581172 -1 0.0986557006835937 6 Carbamidomethyl (C) _HSERMC(Carbamidomethyl (C))VN_ REV__ENSG00000163982|ENST00000296358|OTOP1 6.723162845929126 0.5749384031518959 4 E 1 -1 7.4743 0.0 0.0 1.087 0.0 0.0 119.36169660346576 436.1912325494751 555.5529291529408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E 1.087 + + 34 + 1 2.213 227303.4 1.0 2044 4237 6277 HBL1_DMSO_200M_050219_2,6283 HBL1_DMSO_200M_050219_2,6283,HSERMCVN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6284 33.045 584.0 344820.0 25 0 41304.0 -1 0 112 904.9168067619556 1807.8190605907112 2 905.4196655154228 MULTI CID FTMS 0 0 0 6277 272215.0625 0.148118728929226 -4 0.2526779174804687 7 4 VKAVS 5 -1 22.88 0.0 0.0 1.2656 0.0 0.0 965.3351391885052 355.16352258853755 1320.4986617770428 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 VKAVS 1.2656 - 51 + 1 2.213 135173.5 1.0 2045 4237 6277 HBL1_DMSO_200M_050219_2,6284 HBL1_DMSO_200M_050219_2,6284, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6285 33.054 536.0 290360.0 25 0 13381.0 + 10662 FVQLCPYKGQG 11 126 620.3133317599178 1238.6121105866357 2 620.3138305544853 MULTI CID FTMS 0 0 0 6277 262015.8125 0.5884648066433555 -8 0.3528022766113281 8 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}HPPPPPPQN 11 -1 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} + + 79.194 4.0765 1.5732 6.3938 6.3938 58.212 0.0 0.0 0.0 0.0 51.6482405252727 0.0 0.0 0 2.6549471895720984 0.0 0.0 1.6259059864968997 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}HPPPPPPQN 6.3938 - 8227 + 1 2.213 116854.8 1.0 2046 4237 6277 HBL1_DMSO_200M_050219_2,6285 HBL1_DMSO_200M_050219_2,6285,FVQLCPYKGQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6286 33.065 583.0 402670.0 25 0 61485.0 -1 0 135 403.2381963372889 402.2309198706889 1 404.2454711794853 MULTI CID FTMS 0 0 0 6277 231782.375 0.8475293331483716 -2 0.1938858032226562 9 4 VVW 3 -1 VV + + 11.99 -2.4916 -1.2575 2.9808 2.9808 45.873 0.0 0.0 0.0 0.0 2.7815125038364386 0.0 0.0 0 0.0 0.0 0.0 0.0 VVW 2.9808 - 32 + 1 2.213 184773.4 1.0 2047 4237 6277 HBL1_DMSO_200M_050219_2,6286 HBL1_DMSO_200M_050219_2,6286, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6288 33.069 67.0 1610500.0 25 0 177750.0 -1 VDMMELYN 8 64 523.7141976141774 1045.4138422951546 2 523.7145263552666 MULTI CID FTMS 0 0 0 6287 961905.75 0.3138722447425326 1 -0.0487518310546875 1 2 Oxidation (M) _VDM(Oxidation (M))M(Oxidation (M))ELYN_ ENSG00000205629|ENST00000399069|LCMT1;ENST00000572869.1_1_16:25162908-25186269:+|nuORF;nc|ENSG00000205629|Q9UIC8-2|LCMT1;nc|ENSG00000205629|Q9UIC8-3|LCMT1 11.640296217721598 0.738950129755968 4 VD 2 -1 20.261 0.0 0.0 1.9381 0.0 0.0 0.0 828.2979362999122 828.2979362999122 7.786596949921218 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 VD 1.9381 + + 13 + 1 2.213 90697.8 1.0 2048 4238 6287 HBL1_DMSO_200M_050219_2,6288 HBL1_DMSO_200M_050219_2,6288,VDMMELYN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6289 33.071 92.0 741900.0 25 0 78257.0 + 14041 IAKIQQSTV 9 110 494.296029607877 986.577506282554 2 494.2961608767509 MULTI CID FTMS 0 0 0 6287 821361.125 0.5740117741229444 1 -0.0487518310546875 2 Unmodified _IAKIQQSTV_ ENSG00000105851|ENST00000496166|PIK3CG 34.40172386719151 0.1061884637610825 4 {I|L}A 2 7 34.57 0.0 0.0 3.504 0.0 0.0 0.0 799.4337862604124 799.4337862604124 8.68914805777015 0.0 0.0 0.0 0 0.2887254899964357 1.2218487496163564 0.0 0.0 + {I|L}A 3.504 + + 375 + 1 2.213 60419.5 1.0 2049 4238 6287 HBL1_DMSO_200M_050219_2,6289 HBL1_DMSO_200M_050219_2,6289,IAKIQQSTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6290 33.073 98.0 961130.0 25 0 160680.0 22126 LPPQESRLQ 9 88 534.2951098195646 1066.575666705929 2 534.2951537966728 MULTI CID FTMS 0 0 0 6287 1111980.5 0.8472241256633697 2 -0.0899848937988281 3 Unmodified _LPPQESRLQ_ ENSG00000119596|ENST00000325680|YLPM1;nc|ENSG00000119596|P49750-1|YLPM1;nc|ENSG00000119596|P49750-3|YLPM1 27.628801355627647 0.1796483985696185 4 {I|L}PPEP 5 5 70.261 0.0 0.0 6.5875 0.0 0.0 0.0 530.2777312741903 530.2777312741903 54.54750954047803 0.0 0.0 0.0 0 0.805462187404089 2.0 0.4247425010840047 0.0 {I|L}PPEP 6.5875 - 72 + 1 2.213 80554.2 1.0 2050 4238 6287 HBL1_DMSO_200M_050219_2,6290 HBL1_DMSO_200M_050219_2,6290,LPPQESRLQ False True LPPEQRQSI 33.072754 534.295153796673 179745296.0 6287.0 ENSG00000177613|ENST00000331173|CSTF2T;;ENSG00000101811|ENST00000372972|CSTF2;;nc|ENSG00000101811|P33240-2|CSTF2 4.030800819396973 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6291 33.074 62.0 757630.0 25 0 84155.0 8472 ESYVDTAAM 9 90 493.71094599691867 985.4073390606374 2 493.7110473513603 MULTI CID FTMS 0 0 0 6287 992772.9375 1.0 0 0.0 4 Unmodified _ESYVDTAAM_ ENSG00000174502|ENST00000367135|SLC26A9;nc|ENSG00000174502|Q7LBE3-2|SLC26A9 13.50788311687929 0.4710407108020397 4 [YV]Q 3 7 18.996 0.0 0.0 1.9278 0.0 0.0 0.0 592.193843537453 592.193843537453 2.0065945054641823 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YV]Q 1.9278 - 81 1 2.213 42386.2 1.0 2051 4238 6287 HBL1_DMSO_200M_050219_2,6291 HBL1_DMSO_200M_050219_2,6291,ESYVDTAAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6292 33.075 41.0 1414300.0 25 0 104640.0 + 5633 DPDKTKIGSA 10 85 516.2720090328897 1030.5294651325794 2 516.2717162966728 MULTI CID FTMS 0 0 0 6287 921685.8125 0.7333300745246126 1 -0.0487518310546875 5 Unmodified _DPDKTKIGSA_ REV__ENSG00000116731|ENST00000311066|PRDM2;REV__nc|ENSG00000116731|Q13029-2|PRDM2;REV__nc|ENSG00000116731|Q13029-3|PRDM2;REV__nc|ENSG00000116731|Q13029-5|PRDM2 29.84058131909904 0.2982332456971691 4 [SG]A[{I|L}V]QE{I|L}G{[SA]|[TG]} 11 -1 + 33.592 0.0 0.0 3.2597 3.2597 66.533 0.0 0.0 0.0 3.2695685598578166 7.05082326462496 3.2695685598578166 2.5181197299379967 0 0.3807196863200844 0.8538719643217619 0.4247425010840047 0.0 [SG]A[{I|L}V]QE{I|L}G{[SA]|[TG]};[SG]A{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}G{[SA]|[TG]};[SG]A[{I|L}V][AG]E{I|L}G{[SA]|[TG]};[WR]{[NV]|[RG]}E{I|L}G{[SA]|[TG]};{[QS]|[NT]}[{I|L}V]QE{I|L}G{[SA]|[TG]};{[SA]|[TG]}G[{I|L}V]QE{I|L}G{[SA]|[TG]};{[QS]|[NT]}{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}G{[SA]|[TG]};[SG]A{[QN]|[E{I|L}]|[KN]}RRGW;{[SA]|[TG]}G{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}G{[SA]|[TG]};{[SA]|[TG]}[R{I|L}]QE{I|L}G{[SA]|[TG]} 3.2597;3.0153;2.3739;2.1005;2.0851;1.9681;1.8408;1.7341;1.7238;1.6221 -;-;-;-;-;-;-;-;-;- 403 1 2.213 50298.4 1.0 2052 4238 6287 HBL1_DMSO_200M_050219_2,6292 HBL1_DMSO_200M_050219_2,6292,DPDKTKIGSA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6293 33.078 114.0 1196200.0 25 0 114040.0 + 7435 EGMEQRLQ 8 106 495.7361024853446 989.4576520374892 2 495.7348815798759 MULTI CID FTMS 0 0 0 6287 695137.625 0.7886912996917196 -1 0.0612602233886718 6 Unmodified _EGMEQRLQ_ REV__ENSG00000162614|ENST00000334785|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-2|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-3|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-4|NEXN 28.486842064014134 0.4448922141344407 4 {M(Oxidation (M))|F}{I|L}NQAARV 8 -1 48.921 0.0 0.0 4.9442 0.0 0.0 71.95757215559657 0.0 71.95757215559657 0.0 18.6848380522446 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}{I|L}NQAARV 4.9442 - 523 + 1 2.213 108034.7 1.0 2053 4238 6287 HBL1_DMSO_200M_050219_2,6293 HBL1_DMSO_200M_050219_2,6293,EGMEQRLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6294 33.085 389.0 503960.0 25 0 84907.0 + 41793 VPVPVRDTN 9 113 498.77759939018216 995.5406458471645 2 498.7784606814384 MULTI CID FTMS 0 0 0 6287 486733.1875 0.6825352239078577 -4 0.2659759521484375 7 Unmodified _VPVPVRDTN_ REV__ENST00000323813.3_1_18:649936-657924:-|nuORF 32.30548876998284 0.1201446275138228 4 VPPD 4 -1 63.686 0.0 0.0 6.3971 0.0 0.0 0.0 584.3177660402666 584.3177660402666 41.61252584072537 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.75 0.0 VPPD 6.3971 - 614 + 1 2.213 150934.2 1.0 2054 4238 6287 HBL1_DMSO_200M_050219_2,6294 HBL1_DMSO_200M_050219_2,6294,VPVPVRDTN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6295 33.093 476.0 372950.0 25 0 23381.0 + -1 DQCHWGCV 8 155 531.1980502891302 1060.3815476450602 2 531.1980468630791 MULTI CID FTMS 0 0 0 6287 335084.8125 1.0 0 0.0 8 2 Carbamidomethyl (C) _DQC(Carbamidomethyl (C))HWGC(Carbamidomethyl (C))V_ REV__ENST00000517565.1_1_7:143510599-143510839:-|nuORF 8.593279151180031 0.7721714526254883 4 ARV 3 -1 19.877 0.0 0.0 1.8745 0.0 0.0 716.184862205275 0.0 716.184862205275 0.0 6.800150061873106 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 ARV 1.8745 - 183 1 2.213 132773.7 1.0 2055 4238 6287 HBL1_DMSO_200M_050219_2,6295 HBL1_DMSO_200M_050219_2,6295,DQCHWGCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6296 33.103 544.0 236060.0 25 0 17014.0 + 4237 DAPMTPKQI 9 138 508.758311817082 1015.502070700964 2 508.7578002810478 MULTI CID FTMS 0 0 0 6287 235476.359375 0.4178963847889966 -4 0.2659759521484375 9 Oxidation (M) _DAPM(Oxidation (M))TPKQI_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1 45.69961567697781 0.0497987121815769 4 {[DA]|[EG]}P{M(Oxidation (M))|F}TPKQ{I|L} 9 0 + 56.542 0.0 0.0 5.5679 5.5679 85.327 0.0 0.0 0.0 32.14394421124686 16.36459816187515 16.36459816187515 10.400742479681128 0 0.6109243748081782 2.0 0.2887254899964357 0.7614393726401688 + + {[DA]|[EG]}P{M(Oxidation (M))|F}TPKQ{I|L};{[DA]|[EG]}{I|L}[EC]PKQ{I|L};{[DA]|[EG]}P{M(Oxidation (M))|F}TPK[AG]{I|L};{[DA]|[EG]}P{M(Oxidation (M))|F}{[VA]|[{I|L}G]}RQ{I|L};{[DA]|[EG]}{I|L}[WD]RQ{I|L};{[DA]|[EG]}P{M(Oxidation (M))|F}TPKAAV;{[DA]|[EG]}{I|L}[EC]PK[AG]{I|L};[EP]G{M(Oxidation (M))|F}TPKQ{I|L};{[DA]|[EG]}P[KP][{M(Oxidation (M))|F}T]Q{I|L};{[DA]|[EG]}P{M(Oxidation (M))|F}{[VA]|[{I|L}G]}[VG]Q{I|L} 5.5679;4.5437;4.2862;3.7462;3.6219;3.4046;3.262;2.9548;2.9121;2.8394 +;-;-;-;-;-;-;-;-;- + 654 + 1 2.213 105675.5 1.0 2056 4238 6287 HBL1_DMSO_200M_050219_2,6296 HBL1_DMSO_200M_050219_2,6296,DAPMTPKQI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6297 33.113 601.0 330550.0 25 0 51548.0 -1 0 166 337.6793378319548 673.3441227307096 2 337.6789733767509 MULTI CID FTMS 0 0 0 6287 253454.78125 0.5981720783167007 3 -0.2236099243164062 10 4 {[VA]|[{I|L}G]}PYPQ 6 -1 + 67.279 0.0 0.0 9.9917 9.9917 96.87 0.0 0.0 0.0 26.47817481888638 15.351215791299218 15.351215791299218 15.351215791299218 0 0.6643943297944485 2.0 0.0 0.6989700043360187 {[VA]|[{I|L}G]}PYPQ;{[VA]|[{I|L}G]}PYQP;{[VA]|[{I|L}G]}PY[AG]P;{[VA]|[{I|L}G]}QQTQ;{[VA]|[{I|L}G]}P[PA][YG];{[VA]|[{I|L}G]}[PS]A{[ET]|[MV]};EE[R{I|L}]Q;{[VA]|[{I|L}G]}QQG[TA] 9.9917;7.7119;5.7939;4.7855;4.5844;2.4556;1.5491;1.1809 -;-;-;-;-;-;-;- 106 + 1 2.213 162444.0 1.0 2057 4238 6287 HBL1_DMSO_200M_050219_2,6297 HBL1_DMSO_200M_050219_2,6297, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6299 33.118 60.0 203530.0 25 0 24030.0 -1 ECWIQMMRV 9 30 642.7793869383845 1283.544220943569 2 642.7791015505791 MULTI CID FTMS 0 0 0 6298 896152.9375 0.7118216496054224 1 -0.0412330627441406 1 Carbamidomethyl (C),2 Oxidation (M) _EC(Carbamidomethyl (C))WIQM(Oxidation (M))M(Oxidation (M))RV_ ENSG00000101557|ENST00000261601|USP14;nc|ENSG00000101557|P54578-2|USP14;nc|ENSG00000101557|P54578-3|USP14 0.5247636613948944 0.8963649302248013 4 EQAA[RV] 6 -1 28.416 0.0 0.0 2.2139 0.0 0.0 611.189617516354 0.0 611.189617516354 0.0 28.41637507904749 0.0 0.0 0 0.0 0.0 0.0 0.0 EQAA[RV] 2.2139 - 35 + 1 2.18 17817.5 1.0 2058 4239 6298 HBL1_DMSO_200M_050219_2,6299 HBL1_DMSO_200M_050219_2,6299,ECWIQMMRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6300 33.121 128.0 448820.0 25 0 103620.0 -1 MFNYCSQLED 10 46 661.7524448809684 1321.4903368287366 2 661.7529174685478 MULTI CID FTMS 0 0 0 6298 637671.0 0.8419584941599841 1 -0.0412330627441406 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FNYC(Carbamidomethyl (C))SQLED_ ENSG00000166159|ENST00000299194|LRTM2;LRTM2|p.K348Sfs*5|1|0.32|ENSG00000166159|chr12:1834647-1834647|A/-|frameshift_variant 5.731851221503515 0.7001233259664787 4 DEE 3 -1 14.705 0.0 0.0 1.1128 0.0 0.0 930.3895640683772 0.0 930.3895640683772 0.0 5.752574989159953 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DEE 1.1128 - 5 1 2.18 46962.2 1.0 2059 4239 6298 HBL1_DMSO_200M_050219_2,6300 HBL1_DMSO_200M_050219_2,6300,MFNYCSQLED False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6301 33.124 184.0 492860.0 25 0 70120.0 + 36278 SYGPRAEEY 9 108 536.2415061797568 1070.4684594263135 2 536.2425414919853 MULTI CID FTMS 0 0 0 6298 344728.1875 0.6047150807021191 -1 0.0487518310546875 3 Unmodified _SYGPRAEEY_ ENSG00000141522|ENST00000269321|ARHGDIA 36.506200033944 0.094635877243972 4 EYSY 4 7 31.472 0.0 0.0 2.94 0.0 0.0 510.2564869611344 0.0 510.2564869611344 0.0 15.657978556393813 0.0 0.0 0 0.3807196863200844 0.0 0.3252574989159953 0.0 EYSY 2.94 - 187 1 2.18 71496.0 1.0 2060 4239 6298 HBL1_DMSO_200M_050219_2,6301 HBL1_DMSO_200M_050219_2,6301,SYGPRAEEY True True SYGPRAEEY 33.124122 536.2396 11292197.0 6298.0 ENSG00000141522|ENST00000269321|ARHGDIA 7.994693438212077 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6302 33.133 530.0 344530.0 25 0 58451.0 + 4246 DAPPSRVSV 9 116 464.2485375819246 926.4825222306492 2 464.2492553591728 MULTI CID FTMS 0 0 0 6298 298408.34375 0.1868076388979095 -3 0.2086677551269531 4 Unmodified _DAPPSRVSV_ ENSG00000180900|ENST00000356994|SCRIB;nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB 16.149105407346934 0.3995459350917656 4 {[DA]|[EG]}PP 4 5 39.737 0.0 0.0 4.289 0.0 0.0 0.0 543.2915743463499 543.2915743463499 16.602649242617602 0.0 0.0 0.0 0 0.6549471895720985 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}PP 4.289 + + 118 + 1 2.18 143978.1 1.0 2061 4239 6298 HBL1_DMSO_200M_050219_2,6302 HBL1_DMSO_200M_050219_2,6302,DAPPSRVSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6303 33.144 581.0 303080.0 25 0 26851.0 + 24945 MPPPPPQGV 9 126 468.236188042907 934.457823152614 2 468.2371703982353 MULTI CID FTMS 0 0 0 6298 232679.0 0.1340504363477695 42 -1.5862960815429688 5 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 56.541270873467816 0.0279970378729908 4 DPPPQR 6 5 41.943 0.0 0.0 4.4885 0.0 0.0 226.1141224591813 0.0 226.1141224591813 0.0 16.902403935311185 0.0 0.0 0 1.0044321917401078 0.0 0.4247425010840047 0.0 DPPPQR 4.4885 - 578 1 2.18 140231.2 1.0 2062 4239 6298 HBL1_DMSO_200M_050219_2,6303 HBL1_DMSO_200M_050219_2,6303,MPPPPPQGV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6304 33.154 621.0 434050.0 25 0 51186.0 -1 YFDCIESVME 10 107 654.7572437872857 1307.4999346413713 2 654.7584716677666 MULTI CID FTMS 0 0 0 6298 221234.0625 0.5629155528471466 1 -0.0412330627441406 6 Carbamidomethyl (C),Oxidation (M) _YFDC(Carbamidomethyl (C))IESVM(Oxidation (M))E_ ENSG00000171914|ENST00000636159|TLN2;ENST00000489129.5_1_15:63032816-63046163:+|nuORF 6.723162845929126 0.6955379296933136 4 EQAARV 6 -1 38.158 0.0 0.0 2.9184 0.0 0.0 635.1438715984498 0.0 635.1438715984498 0.0 10.221813686227163 0.0 0.0 0 0.0 0.0 0.5 0.6694451763165201 EQAARV 2.9184 - 441 + 1 2.18 194919.5 1.0 2063 4239 6298 HBL1_DMSO_200M_050219_2,6304 HBL1_DMSO_200M_050219_2,6304,YFDCIESVME False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6306 33.161 257.0 694070.0 25 0 88623.0 -1 0 58 1179.8258087584848 3536.4555968756545 3 1180.494433581829 MULTI CID FTMS 0 0 0 6305 1161636.625 0.7752134547613713 2 -0.2281379699707031 1 4 YC(Carbamidomethyl (C))Y{M(Oxidation (M))|F}G 5 -1 17.423 0.0 0.0 0.49266 0.0 0.0 1311.4435862328794 1531.7382408231977 2843.181827056077 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YC(Carbamidomethyl (C))Y{M(Oxidation (M))|F}G 0.49266 - 277 + 1 2.18 130412.5 1.0 2064 4240 6305 HBL1_DMSO_200M_050219_2,6306 HBL1_DMSO_200M_050219_2,6306, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6307 33.162 43.0 1693500.0 25 0 108890.0 + 945 AFISKVSTH 9 86 495.2750063222758 988.5354597113516 2 495.2744628787041 MULTI CID FTMS 0 0 0 6305 1283957.25 0.9969054334028596 -1 0.0412330627441406 2 Unmodified _AFISKVSTH_ ENSG00000122882|ENST00000372979|ECD;nc|ENSG00000122882|O95905-2|ECD;nc|ENSG00000122882|O95905-3|ECD 49.55428908609986 0.0413471690215031 4 A{M(Oxidation (M))|F}{I|L}SKVSTH 9 0 + 60.83 0.0 0.0 6.1535 6.1535 87.773 0.0 0.0 0.0 37.14031576134659 0.7487865374579314 0.7487865374579314 10.712415457825289 0 1.0189301784845295 0.0 0.3252574989159953 0.0 + + A{M(Oxidation (M))|F}{I|L}SKVSTH;A{M(Oxidation (M))|F}{I|L}S[EP]ARV 6.1535;5.0699 +;- + 277 + 1 2.18 60364.6 1.0 2065 4240 6305 HBL1_DMSO_200M_050219_2,6307 HBL1_DMSO_200M_050219_2,6307,AFISKVSTH True True AFISKVSTH 33.162363 495.274462878704 30296106.0 6305.0 nc|ENSG00000122882|O95905-2|ECD;;nc|ENSG00000122882|O95905-3|ECD;;ENSG00000122882|ENST00000372979|ECD 4.679765065511067 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6308 33.164 87.0 1000800.0 25 0 136110.0 + 4873 DGEAPERWA 9 97 515.7311500159745 1029.447747098749 2 515.7314330935478 MULTI CID FTMS 0 0 0 6305 691974.0 1.0 0 0.0 3 Unmodified _DGEAPERWA_ REV__ENSG00000179057|ENST00000513874|IGSF22;REV__nc|ENSG00000179057|Q8N9C0|IGSF22 11.640296217721598 0.521594087909532 4 VD[HQ][NP]YSA 9 -1 + 24.983 0.0 0.0 2.4269 2.4269 69.885 0.0 0.0 0.0 2.781964799699992 0.2068967394546241 0.2068967394546241 5.792264756339804 0 0.0 0.0 0.6109243748081782 0.0 VD[HQ][NP]YSA;D{[ET]|[MV]}K[WH]GSA;VD[RH][WC(Carbamidomethyl (C))]SA;DV[HQ][NP]YSA;VD[RH][C(Carbamidomethyl (C))S]WA;DV[RH][WC(Carbamidomethyl (C))]SA;D{[ET]|[MV]}K[WH]{[QS]|[NT]};DV[RH][C(Carbamidomethyl (C))S]WA 2.4269;1.8642;1.7976;1.7646;1.2815;1.1353;0.7461;0.61928 -;-;-;-;-;-;-;- 220 + 1 2.18 72822.9 1.0 2066 4240 6305 HBL1_DMSO_200M_050219_2,6308 HBL1_DMSO_200M_050219_2,6308,DGEAPERWA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6309 33.176 654.0 166740.0 25 0 47399.0 + -1 EAMKRGPT 8 118 453.2309866395361 0 453.2310363650322 PEAK CID FTMS 0 0 0 6305 265177.0625 1.0 0 0.0 4 Oxidation (M) _EAM(Oxidation (M))KRGPT_ REV__ENST00000603538.1_1_8:64080757-64080937:-|nuORF 14.581692164780916 0.4900557725783909 4 TP{I|L} 3 -1 11.682 0.0 0.0 1.2917 0.0 0.0 199.0778657577848 391.16843591861567 590.2463016764004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TP{I|L} 1.2917 - 42 + 1 2.18 89294.8 1.0 2067 4240 6305 HBL1_DMSO_200M_050219_2,6309 HBL1_DMSO_200M_050219_2,6309,EAMKRGPT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6310 33.188 732.0 172890.0 25 0 47489.0 + -1 MEDQMWQDDM 10 85 680.7251464724541 0 680.7251464724541 PEAK CID FTMS 0 0 0 -1 0 5 2 Oxidation (M) _M(Oxidation (M))EDQM(Oxidation (M))WQDDM_ REV__ENSG00000159339|ENST00000375448|PADI4;REV__ENST00000468945.1_1_1:17672544-17674609:+|nuORF 1.4819007175156935 0.3961065659209837 4 EQAA 4 -1 12.652 0.0 0.0 0.93065 0.0 0.0 687.0794300525268 270.15754114322505 957.236971195752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EQAA 0.93065 - 35 + 1 2.18 93171.9 1.0 2068 4240 6305 HBL1_DMSO_200M_050219_2,6310 HBL1_DMSO_200M_050219_2,6310,MEDQMWQDDM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6311 33.202 800.0 156080.0 25 0 24661.0 -1 0 84 819.2677536963328 0 819.2679931521416 PEAK CID FTMS 0 0 0 6305 149928.90625 1.0 0 0.0 6 4 D 1 -1 3.9794 0.0 0.0 0.24316 0.0 0.0 629.0534805032491 889.4197481744749 1518.473228677724 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.24316 - 16 + 1 2.18 91057.4 0.9800000190734864 2069 4240 6305 HBL1_DMSO_200M_050219_2,6311 HBL1_DMSO_200M_050219_2,6311, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6312 33.216 795.0 129160.0 25 0 5702.0 -1 DENPDIECADC 11 117 669.2347681559648 1336.4549833787296 2 669.7377807497978 MULTI CID FTMS 0 0 0 6305 151723.6875 0.3186644802597224 3 -0.322265625 7 2 Carbamidomethyl (C) _DENPDIEC(Carbamidomethyl (C))ADC(Carbamidomethyl (C))_ ENSG00000058085|ENST00000264144|LAMC2;nc|ENSG00000058085|Q13753-2|LAMC2 4.897010918128616 0.8520435188433833 4 {[ES]|[DT]|[{I|L}C]}SV 4 -1 18.951 0.0 0.0 1.418 0.0 0.0 0.0 931.2561973282014 931.2561973282014 -1.867036420635355 0.0 -1.867036420635355 0.0 0 0.0 0.0 0.5138793319624578 0.0 {[ES]|[DT]|[{I|L}C]}SV 1.418 - 150 1 2.18 75888.9 1.0 2070 4240 6305 HBL1_DMSO_200M_050219_2,6312 HBL1_DMSO_200M_050219_2,6312,DENPDIECADC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6313 33.23 798.0 411460.0 25 0 22283.0 + 32184 RVVDELDNQM 10 145 617.790296791338 1233.566040649476 2 617.7910644412041 MULTI CID FTMS 0 0 0 6305 135284.703125 0.0723775970421875 -2 0.0899848937988281 8 Oxidation (M) _RVVDELDNQM(Oxidation (M))_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 125.0377797344192 0.000220824405701 4 [RV]VDE{I|L}DNQ{M(Oxidation (M))|F} 10 0 + 109.63 0.0 0.0 8.8875 8.8875 92.526 0.0 0.0 0.0 16.8740810491245 66.76263425167437 16.8740810491245 9.164539485499262 0 1.4802046884880935 1.0 1.6906140654642814 1.1549471895720984 + + [RV]VDE{I|L}DNQ{M(Oxidation (M))|F};[RV]VDE{I|L}DGGQ{M(Oxidation (M))|F};[RV]VDE{I|L}DN[AG]{M(Oxidation (M))|F};[RV]VDE{I|L}NDQ{M(Oxidation (M))|F};[RV]VDE{I|L}DGG[AG]{M(Oxidation (M))|F};[RV]VDE{I|L}ND[AG]{M(Oxidation (M))|F};[RV]VDE{I|L}GGDQ{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}E{I|L}DNQ{M(Oxidation (M))|F};[RV]VDE{I|L}GGD[AG]{M(Oxidation (M))|F};GGQD[K{I|L}]{I|L}DNQ{M(Oxidation (M))|F} 8.8875;8.1445;8.1445;8.1161;7.4045;7.3732;7.3732;6.8959;6.6332;6.5932 +;-;-;-;-;-;-;-;-;- + 2792 1 2.18 240187.0 1.0 2071 4240 6305 HBL1_DMSO_200M_050219_2,6313 HBL1_DMSO_200M_050219_2,6313,RVVDELDNQM True False RVVDELDNQM 33.229788 617.791064441204 49079910.0 6305.0 nc|ENSG00000085231|Q9Y3D8-2|AK6;;ENSG00000085231|ENST00000380822|AK6 8.76919428507487 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6314 33.245 800.0 257720.0 25 0 14953.0 + -1 VDEFCMTQV 9 175 544.2257143098234 1086.436875686447 2 545.2354003787041 MULTI CID FTMS 0 0 0 -1 0 9 Oxidation (M) _VDEFCM(Oxidation (M))TQV_ REV__ENST00000559345.5_1_15:79189432-79189510:+|nuORF 14.838274106304384 0.4350285940865338 4 DVVTN{I|L} 6 -1 29.853 0.0 0.0 2.7478 0.0 0.0 427.0857537155467 0.0 427.0857537155467 0.0 11.716882967217536 0.0 0.0 0 0.0 0.0 1.1505149978319906 0.5941876774005248 DVVTN{I|L} 2.7478 - 644 + 1 2.18 158648.0 0.8500000238418579 2072 4240 6305 HBL1_DMSO_200M_050219_2,6314 HBL1_DMSO_200M_050219_2,6314,VDEFCMTQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6315 33.259 800.0 38123.0 25 0 9408.3 -1 0 43 1095.284594714642 0 1095.284594714642 PEAK CID FTMS 0 0 0 -1 0 10 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.18 31005.1 0.6899999976158142 2073 4240 6305 HBL1_DMSO_200M_050219_2,6315 HBL1_DMSO_200M_050219_2,6315, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6316 33.274 800.0 88950.0 25 0 16243.0 -1 VCWCQCCPQYC 11 70 810.7801391482353 0 810.7801391482353 PEAK CID FTMS 0 0 0 -1 0 11 5 Carbamidomethyl (C) _VC(Carbamidomethyl (C))WC(Carbamidomethyl (C))QC(Carbamidomethyl (C))C(Carbamidomethyl (C))PQYC(Carbamidomethyl (C))_ ENSG00000145103|ENST00000344209|ILDR1;ENST00000460554.1_1_3:121712781-121740924:-|nuORF;nc|ENSG00000145103|Q86SU0-2|ILDR1;nc|ENSG00000145103|Q86SU0-3|ILDR1;nc|ENSG00000145103|Q86SU0-6|ILDR1 0.0 0.4761840153648598 4 VP 2 -1 6.4537 0.0 0.0 0.39849 0.0 0.0 810.1237102740744 610.2852877252561 1420.4089979993305 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VP 0.39849 - 15 + 1 2.18 54045.9 0.7799999713897705 2074 4240 6305 HBL1_DMSO_200M_050219_2,6316 HBL1_DMSO_200M_050219_2,6316,VCWCQCCPQYC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6317 33.288 800.0 236360.0 25 0 39559.0 25033 MPSRPELL 8 159 471.7566710214138 941.4987891096276 2 471.7580444216728 MULTI CID FTMS 0 0 0 6305 93195.234375 0.3343349282618493 26 -1.0773277282714844 12 Unmodified _MPSRPELL_ ENSG00000143514|ENST00000343537|TP53BP2;ENST00000481128.1_1_1:223989797-223991008:-|nuORF;nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2 44.40701690623563 0.1655546087385432 4 MPP 3 5 47.307 0.0 0.0 5.0247 0.0 0.0 0.0 613.3347262018186 613.3347262018186 35.08864383480216 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 MPP 5.0247 - 249 + 1 2.18 149448.4 0.6399999856948853 2075 4240 6305 HBL1_DMSO_200M_050219_2,6317 HBL1_DMSO_200M_050219_2,6317,MPSRPELL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6319 33.292 1.3 26618000.0 25 0 5956200.0 + 5059 DGYEQAARV 9 55 504.7409398526873 1007.4673267721746 2 504.7413207888603 MULTI CID FTMS 0 0 0 6318 30998456.0 0.1062857185804589 4 -0.3192062377929687 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 39.94969957227396 0.0757326808254658 4 [DG]YEQAA[RV] 9 0 + 64.521 0.0 0.0 6.4043 6.4043 87.222 0.0 0.0 0.0 57.531126631746105 5.642492736872597 5.642492736872597 9.208187539523747 0 0.7134679910804405 1.0457574905606752 0.4247425010840047 0.3807196863200844 + + [DG]YEQAA[RV];[DG]YE[AG]AA[RV];[DG]YEV[NG][RV] 6.4043;5.4903;4.5431 +;-;- + 68 + 1 2.167 30740.3 1.0 2076 4241 6318 HBL1_DMSO_200M_050219_2,6319 HBL1_DMSO_200M_050219_2,6319,DGYEQAARV True True DGYEQAARV 33.292217 504.74132078886 8000732672.0 6318.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 8.623213291168213 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6320 33.293 8.8 7661300.0 25 0 1165900.0 + 21604 LPKPPGRGV 9 65 307.5275544155195 919.5608338467584 3 307.5273315310478 MULTI CID FTMS 0 0 0 6318 5891205.0 0.9705429620826788 1 -0.094512939453125 2 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 14.838274106304384 0.4350285940865338 4 {I|L}PKVRTP 7 5 38.192 0.0 0.0 4.1533 0.0 0.0 0.0 125.07253442935782 125.07253442935782 31.202519733105163 0.0 0.0 0.0 0 0.242992819099939 0.0 0.3807196863200844 0.3494850021680094 {I|L}PKVRTP 4.1533 - 48 + 1 2.167 62275.7 1.0 2077 4241 6318 HBL1_DMSO_200M_050219_2,6320 HBL1_DMSO_200M_050219_2,6320,LPKPPGRGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6321 33.295 33.0 2542600.0 25 0 424190.0 -1 0 60 904.9168067619556 1807.8190605907112 2 904.9176513552666 MULTI CID FTMS 0 0 0 6318 2181024.0 1.0 0 0.0 3 4 M 1 -1 10.379 0.0 0.0 0.5741 0.0 0.0 1658.7703067838736 0.0 1658.7703067838736 0.0 1.706465878406183 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.5741 - 15 + 1 2.167 63633.5 1.0 2078 4241 6318 HBL1_DMSO_200M_050219_2,6321 HBL1_DMSO_200M_050219_2,6321, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6322 33.296 55.0 1207600.0 25 0 198180.0 + 21603 LPKPPGRGV 9 58 460.78720631801633 919.5598597028328 2 460.7875244021416 MULTI CID FTMS 0 0 0 6318 1244595.125 1.0 0 0.0 4 Unmodified _LPKPPGRGV_ ENSG00000182325|ENST00000331890|FBXL6;ENST00000526524.5_1_8:145579333-145580709:-|nuORF;nc|ENSG00000182325|Q8N531-2|FBXL6 26.88365393820708 0.1891292719743517 4 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}P 7 5 59.781 0.0 0.0 6.501 0.0 0.0 0.0 125.07254968814688 125.07254968814688 52.791229100142445 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.4247425010840047 {I|L}PK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}P 6.501 - 69 + 1 2.167 61468.4 1.0 2079 4241 6318 HBL1_DMSO_200M_050219_2,6322 HBL1_DMSO_200M_050219_2,6322,LPKPPGRGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6323 33.298 89.0 796630.0 25 0 190790.0 -1 0 78 448.2752527161979 447.2679762495979 1 448.2752868533134 MULTI CID FTMS 0 0 0 6318 969179.4375 0.4449473054281211 2 -0.1886405944824218 5 4 P 1 -1 9.3323 0.0 0.0 2.0865 0.0 0.0 332.203620330944 0.0 332.203620330944 0.0 9.33230545814891 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.0865 - 7 + 1 2.167 57904.8 1.0 2080 4241 6318 HBL1_DMSO_200M_050219_2,6323 HBL1_DMSO_200M_050219_2,6323, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6324 33.3 67.0 563370.0 25 0 52736.0 + 28403 PSPSSVVLCY 10 74 526.2616496625865 0 526.2615844607353 PEAK CID FTMS 0 0 0 6318 926008.875 0.3271957481920709 2 -0.1886405944824218 6 Unmodified _PSPSSVVLCY_ REV__ENSG00000159433|ENST00000290607|STARD9 6.723162845929126 0.3961065659209837 4 AV 2 -1 4.9485 0.0 0.0 0.47106 0.0 0.0 613.2798168038854 264.09919153385005 877.3790083377355 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AV 0.47106 - 21 + 1 2.167 37194.9 1.0 2081 4241 6318 HBL1_DMSO_200M_050219_2,6324 HBL1_DMSO_200M_050219_2,6324,PSPSSVVLCY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6325 33.313 800.0 178560.0 25 0 45306.0 -1 0 56 1120.784407442078 3359.331392926434 3 1121.119555652142 MULTI CID FTMS 0 0 0 6318 310754.84375 0.8197018669441168 -1 0.1336250305175781 7 4 QHP 3 -1 8.4164 0.0 0.0 0.25054 0.0 0.0 2019.7076879477213 974.4449192777764 2994.1526072254983 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QHP 0.25054 - 79 + 1 2.167 119006.9 0.8199999928474426 2082 4241 6318 HBL1_DMSO_200M_050219_2,6325 HBL1_DMSO_200M_050219_2,6325, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6326 33.317 163.0 400200.0 25 0 57519.0 + 32305 RYADRVKEL 9 75 383.8841588247727 1148.6306470745185 3 383.8840515017509 MULTI CID FTMS 0 0 0 6318 279384.3125 0.0181529164681147 6 -0.4586982727050781 8 Unmodified _RYADRVKEL_ ENSG00000142945|ENST00000372224|KIF2C;ENSG00000186638|ENST00000402558|KIF24;nc|ENSG00000142945|Q99661-2|KIF2C;nc|ENSG00000186638|Q5T7B8-2|KIF24;nc|ENSG00000186638|Q5T7B8-4|KIF24 11.517880264261096 0.5249077435482886 4 E{I|L} 2 7 21.454 0.0 0.0 1.8678 0.0 0.0 888.4936199331125 0.0 888.4936199331125 0.0 2.9492384583112674 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + E{I|L} 1.8678 + + 24 1 2.167 60908.9 1.0 2083 4241 6318 HBL1_DMSO_200M_050219_2,6326 HBL1_DMSO_200M_050219_2,6326,RYADRVKEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6327 33.321 205.0 491090.0 25 0 67213.0 + 24272 MAPPPPRSV 9 88 476.256952162498 950.499351391796 2 476.2576782107353 MULTI CID FTMS 0 0 0 6318 266115.1875 0.035066071262682 29 -1.101531982421875 9 Unmodified _MAPPPPRSV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 17.11289562659939 0.3734572693229295 4 {[DS]|[MA]|[CV]|TT}PPPK 6 4 41.661 0.0 0.0 4.383 0.0 0.0 0.0 326.1426180475219 326.1426180475219 31.38296029532631 0.0 0.0 0.0 0 0.6421590589602533 1.5228787452803376 0.0 0.0 {[DS]|[MA]|[CV]|TT}PPPK 4.383 - 72 + 1 2.167 86017.8 1.0 2084 4241 6318 HBL1_DMSO_200M_050219_2,6327 HBL1_DMSO_200M_050219_2,6327,MAPPPPRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6328 33.334 800.0 269140.0 25 0 21782.0 -1 0 123 874.2415257571179 4366.171246452589 5 874.8436767458916 MULTI CID FTMS 0 0 0 6318 248621.5625 0.9590907077158984 2 -0.1886405944824218 10 4 PPPGQQ 6 -1 32.652 0.0 0.0 0.74783 0.0 0.0 2565.289707983777 1193.5530489557252 3758.842756939503 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPGQQ 0.74783 - 224 + 1 2.167 157978.8 0.800000011920929 2085 4241 6318 HBL1_DMSO_200M_050219_2,6328 HBL1_DMSO_200M_050219_2,6328, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6329 33.348 800.0 216100.0 25 0 18767.0 + 44530 YPDSHQPRI 9 129 556.7777308245077 1111.5409087158152 2 556.7776977419853 MULTI CID FTMS 0 0 0 6318 240847.34375 1.0 0 0.0 11 Unmodified _YPDSHQPRI_ ENSG00000143575|ENST00000328703|HAX1;ENST00000411473.1_1_X:147279889-147280084:-|nuORF;ENST00000435087.1_2_1:154246317-154247633:+|nuORF;ENST00000477780.2_1_1:154246158-154247548:+|nuORF;nc|ENSG00000143575|O00165-2|HAX1;nc|ENSG00000143575|O00165-3|HAX1;nc|ENSG00000143575|O00165-5|HAX1 83.42873516780209 0.0166860047644719 4 YPDSHQ{I|L}PR 9 2 + 102.66 0.0 0.0 9.2357 9.2357 82.147 0.0 0.0 0.0 23.76287494579977 1.249387366082999 1.249387366082999 1.249387366082999 0 1.66944517631652 2.0 0.7742275032520141 0.5649093276264391 YPDSHQ{I|L}PR;YPDSHQ{I|L}RP;YPDSHQP{I|L}R;YPDSH[AG]{I|L}PR;YPDSH[AG]{I|L}RP;YPDSH[AG]P{I|L}R;{I|L}{M(Oxidation (M))|F}DSHQ{I|L}PR;{I|L}{M(Oxidation (M))|F}DSHQ{I|L}RP;{I|L}{M(Oxidation (M))|F}DSHQP{I|L}R;{I|L}{M(Oxidation (M))|F}DSH[AG]{I|L}PR 9.2357;9.1233;9.0521;8.4073;8.2949;8.2237;7.0979;6.9855;6.9143;6.2695 -;-;-;-;-;-;-;-;-;- 879 + 1 2.167 135405.6 0.9100000262260436 2086 4241 6318 HBL1_DMSO_200M_050219_2,6329 HBL1_DMSO_200M_050219_2,6329,YPDSHQPRI True True YPDSHQPRI 33.348194 556.777697741985 5886672.5 6318.0 ENST00000411473.1_1_X:147279889-147280084:-|nuORF;;nc|ENSG00000143575|O00165-2|HAX1;;ENST00000435087.1_2_1:154246317-154247633:+|nuORF;;nc|ENSG00000143575|O00165-5|HAX1;;ENSG00000143575|ENST00000328703|HAX1;;nc|ENSG00000143575|O00165-3|HAX1;;ENST00000477780.2_1_1:154246158-154247548:+|nuORF 7.666229248046875 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6330 33.351 151.0 561470.0 25 0 61898.0 + 26693 NYNNQSSNF 9 114 544.2257143098234 1086.436875686447 2 544.2255126833916 MULTI CID FTMS 0 0 0 6318 234439.96875 0.3063802046003593 -3 0.2236099243164062 12 Unmodified _NYNNQSSNF_ chr12:54282662-54282800|48|694.65|0.0|26.05|+|ENST00000677249|HNRNPA1,HNRNPA1;chr12:54283967-54284240|48|13.83|0.0|20.4|+|ENST00000677375|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;ENST00000432375.1_1_6:32293532-32293889:+|nuORF;ENST00000444886.1_1_9:128358610-128358904:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1 37.97399986684836 0.0865783450051559 4 [YN]NNQS 6 3 35.067 0.0 0.0 3.2277 0.0 0.0 0.0 363.1291113644342 363.1291113644342 17.888728364440137 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3807196863200844 + [YN]NNQS 3.2277 + + 403 1 2.167 69890.5 1.0 2087 4241 6318 HBL1_DMSO_200M_050219_2,6330 HBL1_DMSO_200M_050219_2,6330,NYNNQSSNF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6331 33.358 405.0 213050.0 25 0 22828.0 + 4369 DAVAQSTRI 9 117 480.7590939921208 959.5036350510416 2 480.7582885622978 MULTI CID FTMS 0 0 0 6318 200952.375 0.0366874541526348 5 -0.4189491271972656 13 Unmodified _DAVAQSTRI_ ENSG00000111669|ENST00000396705|TPI1;nc|ENSG00000111669|P60174-3|TPI1;nc|ENSG00000111669|P60174-4|TPI1 34.93206674587334 0.1032771302489716 4 {[DA]|[EG]}VAQS 6 3 65.961 0.0 0.0 6.8745 0.0 0.0 0.0 385.22226892642817 385.22226892642817 40.15099728730121 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.0 0.7059771852360797 + {[DA]|[EG]}VAQS 6.8745 + + 874 + 1 2.167 68031.5 1.0 2088 4241 6318 HBL1_DMSO_200M_050219_2,6331 HBL1_DMSO_200M_050219_2,6331,DAVAQSTRI True True DAVAQSTRI 33.35844 480.758288562298 36716840.0 6318.0 nc|ENSG00000111669|P60174-4|TPI1;;ENSG00000111669|ENST00000396705|TPI1;;nc|ENSG00000111669|P60174-3|TPI1 3.95296573638916 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6332 33.368 487.0 223450.0 25 0 11089.0 -1 0 154 442.2326744878114 441.22539802121145 1 442.2278320193291 MULTI CID FTMS 0 0 0 6318 125477.4453125 0.7900815626435183 -24 1.0137252807617188 14 4 AV 2 -1 16.454 0.0 0.0 3.7291 0.0 0.0 253.1086357915224 0.0 253.1086357915224 0.0 6.075046625430254 0.0 0.0 0 0.0 0.0 0.0 0.0 AV 3.7291 - 38 + 1 2.167 87869.3 1.0 2089 4241 6318 HBL1_DMSO_200M_050219_2,6332 HBL1_DMSO_200M_050219_2,6332, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6333 33.382 800.0 192430.0 25 0 26393.0 + 45868 YYQTAPKAGY 10 124 581.2821155676966 1160.549678202193 2 581.2821533083916 MULTI CID FTMS 0 0 0 6318 88592.9140625 0.5521303620324705 -1 0.1336250305175781 15 Unmodified _YYQTAPKAGY_ ENSG00000056097|ENST00000265069|ZFR;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 47.74868867922204 0.0933642699623533 4 YYQTAPKAGY 10 0 + 69.435 0.0 0.0 5.9829 5.9829 72.833 0.0 0.0 0.0 41.72304947512243 3.0201765547475787 3.0201765547475787 0.5115252244738144 0 0.7614393726401688 2.0 0.5 0.4247425010840047 + + YYQTAPKAGY;YYQTAPKQY;YY[AG]TAPKAGY;YY[AG]TAPKQY;[YT]QYAPKAGY;[YT]QYAPKQY;YYQQQ[{I|L}V]GY;[DP]PKPA[NP]YY;YYQAAN[{I|L}V]GY;[DP]PKPAYQ[{M(Oxidation (M))|F}V] 5.9829;5.9389;5.1933;5.1454;3.4415;3.3975;2.9289;2.877;2.8213;2.8134 +;-;-;-;-;-;-;-;-;- + 2408 + 1 2.167 116611.0 0.4699999988079071 2090 4241 6318 HBL1_DMSO_200M_050219_2,6333 HBL1_DMSO_200M_050219_2,6333,YYQTAPKAGY True True YYQTAPKAGY 33.382046 581.282153308392 986080.375 6318.0 ENSG00000056097|ENST00000265069|ZFR;;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 7.667551040649414 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6335 33.387 38.0 1645200.0 25 0 432700.0 + 4247 DAPPSRVSV 9 56 464.2485375819246 926.4825222306492 2 464.2484008669853 MULTI CID FTMS 0 0 0 6334 1597409.75 1.0 0 0.0 1 Unmodified _DAPPSRVSV_ ENSG00000180900|ENST00000356994|SCRIB;nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB 12.240655878213236 0.5053430591993562 4 {[DA]|[EG]}PP 4 5 40.445 0.0 0.0 4.3655 0.0 0.0 0.0 543.2909029596311 543.2909029596311 29.47621246364342 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[DA]|[EG]}PP 4.3655 + + 13 + 1 2.171 54976.2 1.0 2091 4242 6334 HBL1_DMSO_200M_050219_2,6335 HBL1_DMSO_200M_050219_2,6335,DAPPSRVSV False True DAPPSRVSV 33.386922 464.248400866985 148357464.0 6334.0 nc|ENSG00000180900|Q14160|SCRIB;;nc|ENSG00000180900|Q14160-2|SCRIB;;ENSG00000180900|ENST00000356994|SCRIB 6.612313747406006 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6336 33.388 64.0 1013200.0 25 0 182530.0 + 21500 LPHWPLPHA 9 65 534.2951098195646 1066.575666705929 2 534.2949706912041 MULTI CID FTMS 0 0 0 6334 805752.375 0.6139072145694628 6 -0.4100608825683594 2 Unmodified _LPHWPLPHA_ REV__ENST00000266000.10_2_6:33288751-33288820:-|nuORF 14.581692164780916 0.4419739649577144 4 {I|L}PPEP 5 -1 66.454 0.0 0.0 6.2306 0.0 0.0 0.0 530.2808253146318 530.2808253146318 59.463950151760656 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {I|L}PPEP 6.2306 - 26 + 1 2.171 60083.8 1.0 2092 4242 6334 HBL1_DMSO_200M_050219_2,6336 HBL1_DMSO_200M_050219_2,6336,LPHWPLPHA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6337 33.39 62.0 928380.0 25 0 127160.0 + 41553 VPPDTRNVV 9 68 498.77759939018216 995.5406458471645 2 498.7769653201103 MULTI CID FTMS 0 0 0 6334 713125.375 1.0 0 0.0 3 Unmodified _VPPDTRNVV_ ENSG00000275835|ENST00000615383|TUBGCP5;nc|ENSG00000275835|Q96RT8-2|TUBGCP5 17.11289562659939 0.3734572693229295 4 VPPD 4 5 56.186 0.0 0.0 5.6437 0.0 0.0 0.0 584.3163859423379 584.3163859423379 45.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VPPD 5.6437 + + 29 + 1 2.171 50400.8 1.0 2093 4242 6334 HBL1_DMSO_200M_050219_2,6337 HBL1_DMSO_200M_050219_2,6337,VPPDTRNVV False True VPPDTRNVV 33.390004 498.77696532011 185863116.0 6334.0 nc|ENSG00000275835|Q96RT8-2|TUBGCP5;;ENSG00000275835|ENST00000615383|TUBGCP5 6.312803745269775 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6338 33.392 90.0 647130.0 25 0 51095.0 -1 DAPMTPKQI 9 93 508.758311817082 1015.502070700964 2 508.7582275271416 MULTI CID FTMS 0 0 0 6334 563480.25 1.0 0 0.0 4 Oxidation (M) _DAPM(Oxidation (M))TPKQI_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1 36.12702656103203 0.0967173616627612 4 {[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TPKQ{I|L} 9 -1 + 40.956 0.0 0.0 4.033 4.033 67.162 0.0 0.0 0.0 28.73721324904025 9.076535249994537 9.076535249994537 1.7609125905568064 0 0.3807196863200844 2.0 0.0 0.7059771852360797 {[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TPKQ{I|L};{[DA]|[EG]}{I|L}[EC]PKQ{I|L};{[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TPK[AG]{I|L};{[DA]|[EG]}{I|L}[EC]PK[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T[KP]{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]} 4.033;3.8596;2.806;2.6326;0.23182 +;-;-;-;- + 86 + 1 2.171 51174.6 1.0 2094 4242 6334 HBL1_DMSO_200M_050219_2,6338 HBL1_DMSO_200M_050219_2,6338,DAPMTPKQI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6339 33.395 165.0 438420.0 25 0 29408.0 + -1 SNVGPCKKMFL 11 89 620.3133317599178 1238.6121105866357 2 620.3135864138603 MULTI CID FTMS 0 0 0 6334 378545.15625 0.8501796134095344 -3 0.2693710327148437 5 Oxidation (M) _SNVGPCKKM(Oxidation (M))FL_ REV__ENSG00000111199|ENST00000261740|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-2|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-3|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-4|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-5|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-6|TRPV4 15.248480904072842 0.7179608125786238 4 {[HG]|PP}AMPPPPP[QP]N 12 -1 {[HG]|PP}AM + + 68.696 10.177 2.5688 5.5462 5.5462 54.812 0.0 0.0 0.0 0.0 51.863044005075736 0.0 0.0 0 2.774227503252014 0.0 0.0 1.360924374808178 {[HG]|PP}AMPPPPP[QP]N 5.5462 - 1496 + 1 2.171 60088.5 1.0 2095 4242 6334 HBL1_DMSO_200M_050219_2,6339 HBL1_DMSO_200M_050219_2,6339,SNVGPCKKMFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6340 33.4 277.0 401760.0 25 0 56979.0 + 36279 SYGPRAEEY 9 128 536.2415061797568 1070.4684594263135 2 536.2405883669853 MULTI CID FTMS 0 0 0 6334 315059.90625 0.5526715932794757 2 -0.1515541076660156 6 Unmodified _SYGPRAEEY_ ENSG00000141522|ENST00000269321|ARHGDIA 40.23920728925047 0.0741434193262949 4 SYGC(Carbamidomethyl (C)) 4 6 56.247 0.0 0.0 5.2544 0.0 0.0 0.0 600.2926729791624 600.2926729791624 25.89755485660417 0.0 0.0 0.0 0 0.6694451763165201 2.0 0.0 0.0 SYGC(Carbamidomethyl (C)) 5.2544 - 274 + 1 2.171 91999.6 1.0 2096 4242 6334 HBL1_DMSO_200M_050219_2,6340 HBL1_DMSO_200M_050219_2,6340,SYGPRAEEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6341 33.403 108.0 393420.0 25 0 19252.0 + 36679 TAYQNQQI 8 83 483.2396696880489 964.464786442898 2 483.2380859255791 MULTI CID FTMS 0 0 0 6334 313060.78125 1.0 0 0.0 7 Unmodified _TAYQNQQI_ ENSG00000092607|ENST00000369429|TBX15;ENSG00000112837|ENST00000369663|TBX18;ENSG00000122145|ENST00000373296|TBX22;ENST00000606521.1_1_6:85452265-85472428:-|nuORF;nc|ENSG00000092607|Q96SF7-2|TBX15;nc|ENSG00000122145|Q9Y458-2|TBX22 18.13498045792455 0.6430038125133779 4 {M(Oxidation (M))|F}RRC(Carbamidomethyl (C)){I|L} 5 7 13.188 0.0 0.0 1.3673 0.0 0.0 214.07136710871663 0.0 214.07136710871663 0.0 1.127451000356423 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}RRC(Carbamidomethyl (C)){I|L} 1.3673 - 176 + 1 2.171 40573.0 1.0 2097 4242 6334 HBL1_DMSO_200M_050219_2,6341 HBL1_DMSO_200M_050219_2,6341,TAYQNQQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6342 33.407 214.0 529470.0 25 0 64599.0 + 32648 SAYYTSRKI 9 103 363.52936231796696 1087.566257554101 3 363.5290099978447 MULTI CID FTMS 0 0 0 6334 233858.828125 1.0 0 0.0 8 Unmodified _SAYYTSRKI_ ENST00000473858.5_1_1:24294155-24306819:-|nuORF;nc|ENSG00000188529|O75494-3|SRSF10;nc|ENSG00000188529|O75494-5|SRSF10;nc|ENSG00000188529|O75494-6|SRSF10 32.78568957990786 0.1150597335874693 4 {[SA]|[TG]}YY{I|L}KK{[ES]|[DT]|[{I|L}C]} 9 4 + 61.137 0.0 0.0 5.6214 5.6214 77.888 0.0 0.0 0.0 26.44402179365485 6.438937347570075 6.438937347570075 4.018637558036673 0 0.3807196863200844 1.6989700043360187 1.274227503252014 0.3494850021680094 {[SA]|[TG]}YY{I|L}KK{[ES]|[DT]|[{I|L}C]};{[SA]|[TG]}Y{I|L}YKK{[ES]|[DT]|[{I|L}C]};{[SA]|[TG]}[DG][PG]{I|L}KK{[ES]|[DT]|[{I|L}C]};{[SA]|[TG]}[H{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Y{[SA]|[TG]} 5.6214;5.2519;3.1028;1.3906 -;-;-;- 192 + 1 2.171 92795.5 1.0 2098 4242 6334 HBL1_DMSO_200M_050219_2,6342 HBL1_DMSO_200M_050219_2,6342,SAYYTSRKI True True SAYYTSRKI 33.406679 363.529009997845 1389436.0 6334.0 nc|ENSG00000188529|O75494-5|SRSF10;;nc|ENSG00000188529|O75494-6|SRSF10;;ENST00000473858.5_1_1:24294155-24306819:-|nuORF;;nc|ENSG00000188529|O75494-3|SRSF10 0.8695988059043884 3.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 6343 33.412 264.0 271520.0 25 0 25738.0 + -1 DYDHMKFY 8 107 567.7331337938937 1133.4517146545872 2 567.7324706912041 MULTI CID FTMS 0 0 0 6334 199418.78125 0.3402594703333821 -2 0.2281379699707031 9 Oxidation (M) _DYDHM(Oxidation (M))KFY_ REV__ENSG00000180398|ENST00000319466|MCFD2;REV__ENST00000477791.5_1_2:47134810-47142912:-|nuORF;REV__nc|ENSG00000180398|Q8NI22-2|MCFD2;REV__nc|ENSG00000180398|Q8NI22-3|MCFD2 13.50788311687929 0.7113601687236069 4 [EP]AAAKY 7 -1 31.929 0.0 0.0 2.817 0.0 0.0 0.0 400.0638867254768 400.0638867254768 9.939644787305395 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.6747425010840047 0.0 [EP]AAAKY 2.817 - 477 1 2.171 57636.4 1.0 2099 4242 6334 HBL1_DMSO_200M_050219_2,6343 HBL1_DMSO_200M_050219_2,6343,DYDHMKFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6344 33.425 800.0 97361.0 25 0 22620.0 -1 0 41 1151.7910989889074 3452.351467566922 3 1152.460009753704 MULTI CID FTMS 0 0 0 6334 189389.328125 1.0 0 0.0 10 4 E 1 -1 6.9897 0.0 0.0 0.20246 0.0 0.0 2796.12348956147 524.1615084283811 3320.284997989851 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20246 - 4 + 1 2.171 69377.7 0.5600000023841858 2100 4242 6334 HBL1_DMSO_200M_050219_2,6344 HBL1_DMSO_200M_050219_2,6344, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6345 33.433 439.0 150050.0 25 0 5087.0 -1 0 72 753.8447822536208 3011.350023148083 4 754.0955688357353 MULTI CID FTMS 0 0 0 6334 169511.71875 1.0 0 0.0 11 4 QGSH{[YC]|[HE]} 6 -1 27.184 0.0 0.0 0.90273 0.0 0.0 2318.066581478046 0.0 2318.066581478046 0.0 12.408037477650636 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.5 QGSH{[YC]|[HE]} 0.90273 - 362 + 1 2.171 54272.9 1.0 2101 4242 6334 HBL1_DMSO_200M_050219_2,6345 HBL1_DMSO_200M_050219_2,6345, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6346 33.447 800.0 137700.0 25 0 6927.4 -1 0 89 603.2774539928529 3011.3508876312644 5 603.4772827029228 MULTI CID FTMS 0 0 0 6334 146691.546875 1.0 0 0.0 12 4 GTEG 4 -1 26.414 0.0 0.0 0.87716 0.0 0.0 1291.5909953896387 1372.587388812743 2664.178384202381 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 GTEG 0.87716 - 101 + 1 2.171 86134.9 0.6399999856948853 2102 4242 6334 HBL1_DMSO_200M_050219_2,6346 HBL1_DMSO_200M_050219_2,6346, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6347 33.461 800.0 202630.0 25 0 23497.0 -1 0 74 644.778074138434 2575.083190687336 4 645.0287963747978 MULTI CID FTMS 0 0 0 6334 140848.84375 1.0 0 0.0 13 4 DD 2 -1 23.271 0.0 0.0 0.9037 0.0 0.0 728.3400628439637 1613.6919832486356 2342.032046092599 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 DD 0.9037 - 36 + 1 2.171 123938.4 0.6200000047683716 2103 4242 6334 HBL1_DMSO_200M_050219_2,6347 HBL1_DMSO_200M_050219_2,6347, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6348 33.476 800.0 65944.0 25 0 10618.0 -1 0 55 1169.8421764852687 3506.504700056006 3 1170.511401355267 MULTI CID FTMS 0 0 0 6334 125366.1640625 1.0 0 0.0 14 4 {M(Oxidation (M))|F}C(Carbamidomethyl (C))GY 4 -1 18.928 0.0 0.0 0.53979 0.0 0.0 947.3346844661312 2028.9723496005645 2976.307034066696 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C))GY 0.53979 - 26 + 1 2.171 44919.5 0.449999988079071 2104 4242 6334 HBL1_DMSO_200M_050219_2,6348 HBL1_DMSO_200M_050219_2,6348, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6350 33.481 59.0 668940.0 25 0 48940.0 + 32185 RVVDELDNQM 10 67 617.790296791338 1233.566040649476 2 617.7906371951103 MULTI CID FTMS 0 0 0 6349 897473.75 0.4801503195333337 1 -0.0574264526367187 1 Oxidation (M) _RVVDELDNQM(Oxidation (M))_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 51.487983226225225 0.0714176344394665 4 [RV]VDE{I|L}DNQ{M(Oxidation (M))|F} 10 0 + 76.375 0.0 0.0 6.1914 6.1914 85.5 0.0 0.0 0.0 6.85169394249219 56.24298247225546 6.85169394249219 9.164539485499247 0 1.2614393726401687 0.0 0.0 0.805462187404089 + + [RV]VDE{I|L}DNQ{M(Oxidation (M))|F};[RV]VDE{I|L}DGGQ{M(Oxidation (M))|F};[RV]VDE{I|L}DN[AG]{M(Oxidation (M))|F};[RV]VDE{I|L}DGG[AG]{M(Oxidation (M))|F};[RV]VD[QP][DN][YE] 6.1914;5.4484;5.4484;4.7084;0.05701 +;-;-;-;- + 152 1 2.171 34998.2 1.0 2105 4243 6349 HBL1_DMSO_200M_050219_2,6350 HBL1_DMSO_200M_050219_2,6350,RVVDELDNQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6351 33.484 153.0 315170.0 25 0 16616.0 + 946 AFISKVSTH 9 90 495.2750063222758 988.5354597113516 2 495.7765991091728 MULTI CID FTMS 0 0 0 6349 214936.25 0.2134949853839824 2 -0.1305656433105468 2 Unmodified _AFISKVSTH_ ENSG00000122882|ENST00000372979|ECD;nc|ENSG00000122882|O95905-2|ECD;nc|ENSG00000122882|O95905-3|ECD 32.78568957990786 0.1150597335874693 4 AAQN{I|L}{[CP]|[EA]} 7 8 40.974 0.0 0.0 4.1449 0.0 0.0 273.1792469709 0.0 273.1792469709 0.0 24.84083206033368 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3494850021680094 AAQN{I|L}{[CP]|[EA]} 4.1449 - 193 1 2.171 40868.9 1.0 2106 4243 6349 HBL1_DMSO_200M_050219_2,6351 HBL1_DMSO_200M_050219_2,6351,AFISKVSTH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6352 33.486 118.0 702290.0 25 0 57161.0 + + 40785 VILRDSHGV 9 100 332.5261152376493 994.556516313148 3 332.5257140994072 MULTI CID FTMS 0 0 0 6349 414982.59375 1.0 0 0.0 3 Unmodified _VLLIYMMI_ ENSG00000110700|ENST00000525634|RPS13;ENST00000531908.5_1_11:17095982-17097186:-|nuORF;ENST00000526895.5_1_11:17095982-17099246:-|nuORF 11.114462752807354 0.7467182956244686 4 V{I|L}V 3 -1 43.817 0.0 0.0 4.4057 0.0 0.0 0.0 680.3114951628212 680.3114951628212 29.10285334183937 0.0 0.0 0.0 0 0.2134679910804404 1.6989700043360187 0.0 0.0 V{I|L}V 4.4057 - 220 + 1 2.171 72671.3 1.0 2107 4243 6349 HBL1_DMSO_200M_050219_2,6352 HBL1_DMSO_200M_050219_2,6352,VLLIYMMI False False VILRDSHGV 33.486345 332.525714099407 2927271.75 6349.0 ENSG00000110700|ENST00000525634|RPS13;;ENST00000531908.5_1_11:17095982-17097186:-|nuORF;;ENST00000526895.5_1_11:17095982-17099246:-|nuORF 1.650324861208598 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6353 33.489 159.0 545590.0 25 0 69848.0 + 26140 NPSMPQRTV 9 102 515.260965616398 1028.507378299596 2 515.2612792849541 MULTI CID FTMS 0 0 0 6349 344681.3125 1.0 0 0.0 4 Unmodified _NPSMPQRTV_ ENSG00000197943|ENST00000564138|PLCG2 47.594388314883695 0.0456443387682827 4 [NP]SMPQR{[TV]|[{I|L}S]} 9 0 + 43.839 0.0 0.0 4.2624 4.2624 78.606 0.0 0.0 0.0 31.27304383796932 1.3034258797900833 1.3034258797900833 9.208187539523747 0 0.7742275032520141 1.3979400086720375 0.4247425010840047 0.0 + + [NP]SMPQR{[TV]|[{I|L}S]};[NP]SMP[AG]R{[TV]|[{I|L}S]};[NP][WE]QR{[TV]|[{I|L}S]};[NP][WE][AG]R{[TV]|[{I|L}S]} 4.2624;3.3671;1.4226;0.52202 +;-;-;- + 182 + 1 2.171 73062.2 1.0 2108 4243 6349 HBL1_DMSO_200M_050219_2,6353 HBL1_DMSO_200M_050219_2,6353,NPSMPQRTV True True NPSMPQRTV 33.489495 515.261279284954 204606480.0 6349.0 ENSG00000197943|ENST00000564138|PLCG2 8.279940764109293 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6354 33.493 190.0 371340.0 25 0 34358.0 + 24946 MPPPPPQGV 9 89 468.236188042907 934.457823152614 2 468.2368957400322 MULTI CID FTMS 0 0 0 6349 331243.28125 0.190835040501418 46 -1.4497718811035156 5 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 4 {M(Oxidation (M))|F}PPPQR 6 4 37.612 0.0 0.0 4.025 0.0 0.0 194.1056385724625 0.0 194.1056385724625 0.0 23.632900219968107 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 {M(Oxidation (M))|F}PPPQR 4.025 - 179 1 2.171 58042.7 1.0 2109 4243 6349 HBL1_DMSO_200M_050219_2,6354 HBL1_DMSO_200M_050219_2,6354,MPPPPPQGV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6355 33.497 201.0 486980.0 25 0 47174.0 + 35765 SVIKELRKA 9 106 348.5571033230804 0 348.5569946169853 PEAK CID FTMS 0 0 0 6349 165758.578125 1.0 0 0.0 6 Unmodified _SVIKELRKA_ ENSG00000204899|ENST00000377818|MZT1 27.628801355627647 0.1319135480000405 4 E 1 8 10.797 0.0 0.0 1.5533 0.0 0.0 79.72848489223072 483.3056236504725 563.0341085427033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + E 1.5533 + + 25 + 1 2.171 85383.9 1.0 2110 4243 6349 HBL1_DMSO_200M_050219_2,6355 HBL1_DMSO_200M_050219_2,6355,SVIKELRKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6356 33.506 500.0 247170.0 25 0 21435.0 -1 VDMMELYN 8 119 523.7141976141774 1045.4138422951546 2 523.7148925662041 MULTI CID FTMS 0 0 0 6349 166833.078125 0.0544380493914295 6 -0.3754768371582031 7 2 Oxidation (M) _VDM(Oxidation (M))M(Oxidation (M))ELYN_ ENSG00000205629|ENST00000399069|LCMT1;ENST00000572869.1_1_16:25162908-25186269:+|nuORF;nc|ENSG00000205629|Q9UIC8-2|LCMT1;nc|ENSG00000205629|Q9UIC8-3|LCMT1 16.942295170755138 0.6606234159769251 4 VD 2 -1 31.812 0.0 0.0 3.043 0.0 0.0 0.0 828.2956692463621 828.2956692463621 16.851294994513097 0.0 0.0 0.0 0 0.1462566630072955 1.0969100130080565 0.3807196863200844 0.0 VD 3.043 + + 92 + 1 2.171 97968.2 1.0 2111 4243 6349 HBL1_DMSO_200M_050219_2,6356 HBL1_DMSO_200M_050219_2,6356,VDMMELYN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6357 33.52 800.0 169500.0 25 0 24126.0 + 13637 HPRTSITV 8 144 455.7589348525787 0 455.7590820193291 PEAK CID FTMS 0 0 0 6349 147455.6875 1.0 0 0.0 8 Unmodified _HPRTSITV_ ENSG00000077348|ENST00000221233|EXOSC5;ENST00000593523.1_1_19:41897706-41903233:-|nuORF 54.773552608820026 0.0822686074598012 4 NVHT 4 7 30.988 0.0 0.0 3.4071 0.0 0.0 341.1998022229324 114.05643640689686 455.2562386298293 0.0 0.0 0.0 0.0 0 1.7302046884880935 0.0 0.8737125054200234 0.0 NVHT 3.4071 - 184 + 1 2.171 110039.8 0.6000000238418579 2112 4243 6349 HBL1_DMSO_200M_050219_2,6357 HBL1_DMSO_200M_050219_2,6357,HPRTSITV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6358 33.533 800.0 47236.0 25 0 6440.1 -1 0 44 1179.8258087584848 3536.4555968756545 3 1180.497119128704 MULTI CID FTMS 0 0 0 6349 127267.1171875 0.0849311905884873 5 -0.3159332275390625 9 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.19765 0.0 0.0 1473.5167185450623 1912.8613273118665 3386.378045856929 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19765 - 1 + 1 2.171 36430.4 0.4600000083446502 2113 4243 6349 HBL1_DMSO_200M_050219_2,6358 HBL1_DMSO_200M_050219_2,6358, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6360 33.55 800.0 253180.0 25 0 68000.0 + 24927 MPPKAGQTI 9 156 471.7566710214138 941.4987891096276 2 471.7576782107353 MULTI CID FTMS 0 0 0 6359 107296.0546875 0.3849211709944237 30 -0.9541053771972656 1 Unmodified _MPPKAGQTI_ ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB;nc|ENSG00000170322|Q6P4R8-3|NFRKB 49.93300154707207 0.0405168250806675 4 MPPKQQT{I|L} 8 2 + 63.763 0.0 0.0 6.7725 6.7725 92.237 0.0 0.0 0.0 34.805008060618626 11.638568026386691 11.638568026386691 20.02596207519796 0 0.5891368308784531 2.0 1.4049471895720984 0.0 MPPKQQT{I|L};MPPK[KS]SPA;MPPK[KS]SAP;MPPK[KS][PA]S;MP[W{I|L}]{[TV]|[{I|L}S]}PV;MP[W{I|L}]{[TV]|[{I|L}S]}VP;[KP]A{[QG]|[NA]}T{I|L}PM;VV[WP]T{I|L}PM;[PA]K{[QG]|[NA]}T{I|L}PM;[KP]QQT{I|L}PM 6.7725;4.6455;4.5307;4.3487;2.9688;2.7895;1.9238;1.8136;1.7644;1.7425 -;-;-;-;-;-;-;-;-;- 616 + 1 2.171 158271.8 0.5799999833106995 2114 4244 6359 HBL1_DMSO_200M_050219_2,6360 HBL1_DMSO_200M_050219_2,6360,MPPKAGQTI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6361 33.552 108.0 592240.0 25 0 74927.0 + 41798 VPVQPGSSV 9 77 435.2400722158064 868.4655914984129 2 435.2400390505791 MULTI CID FTMS 0 0 0 6359 364411.09375 0.5532930200126096 -1 0.0574264526367187 2 Unmodified _VPVQPGSSV_ ENSG00000149476|ENST00000394900|TKFC;ENST00000524953.1_1_11:61110045-61110363:+|nuORF;nc|ENSG00000149476|Q3LXA3-2|TKFC 44.40701690623563 0.0526327925666318 4 [VP]QV 4 5 28.927 0.0 0.0 3.3308 0.0 0.0 0.0 442.1946423583028 442.1946423583028 9.841532552839016 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.0 0.25 [VP]QV 3.3308 - 67 1 2.171 60571.7 1.0 2115 4244 6359 HBL1_DMSO_200M_050219_2,6361 HBL1_DMSO_200M_050219_2,6361,VPVQPGSSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6362 33.555 134.0 768830.0 25 0 66560.0 + 22370 LPSPSSLGH 9 126 447.73727708737374 893.4600012415475 2 447.7377807497978 MULTI CID FTMS 0 0 0 6359 357089.46875 0.980295035711666 -1 0.0574264526367187 3 Unmodified _LPSPSSLGH_ ENST00000174618.4_1_17:2287644-2288013:-|nuORF 48.345845343767074 0.0439967357579942 4 {I|L}PSPSHGS{I|L} 9 4 + 71.564 0.0 0.0 8.0097 8.0097 78.624 0.0 0.0 0.0 32.62694224651139 0.3138501108154941 0.3138501108154941 0.3138501108154941 0 1.086696871556164 1.6989700043360187 1.392159058960253 0.0 {I|L}PSPSHGS{I|L};{I|L}PSPSHGTV;{I|L}PSP{[WT]|[RM]}PP;{I|L}[W{M(Oxidation (M))|F}][QT]S{I|L};{I|L}[W{M(Oxidation (M))|F}][QT]TV;{I|L}[W{M(Oxidation (M))|F}][TA]GS{I|L};{I|L}[W{M(Oxidation (M))|F}][TA]GTV;{I|L}[W{M(Oxidation (M))|F}][C(Carbamidomethyl (C))R]{I|L};{I|L}[W{M(Oxidation (M))|F}][{I|L}T]{[QS]|[NT]} 8.0097;7.9746;6.0118;1.5235;1.4884;1.4586;1.4234;0.66194;0.33925 -;-;-;-;-;-;-;-;- 208 + 1 2.171 83453.2 1.0 2116 4244 6359 HBL1_DMSO_200M_050219_2,6362 HBL1_DMSO_200M_050219_2,6362,LPSPSSLGH True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6363 33.559 234.0 453190.0 25 0 33955.0 + 40192 VGPTTGRPQL 10 111 513.2905337766491 1024.566514620098 2 513.2903320193291 MULTI CID FTMS 0 0 0 6359 261887.515625 0.303433782978019 -2 0.1515541076660156 4 Unmodified _VGPTTGRPQL_ REV__ENST00000576886.5_1_16:2834849-2835800:-|nuORF 29.081581746732265 0.3152867722954398 4 [VG]PTGAR[PS]A{I|L} 11 -1 + 70.059 0.0 0.0 6.8379 6.8379 85.764 0.0 0.0 0.0 46.01783263018984 1.4264534681742873 1.4264534681742873 6.575773191777934 0 1.110924374808178 2.0 0.7302046884880937 0.0 [VG]PTGAR[PS]A{I|L};[VG]PTQR[PS]A{I|L};RPTGA[VG][PS]A{I|L};RPTQ[VG][PS]A{I|L};[VG]P{I|L}E{[QN]|[E{I|L}]|[KN]}{I|L}R;[TP][WQ][K{I|L}]P[VG];[TP][WQ][KP]{I|L}[VG] 6.8379;6.1961;4.8859;4.2441;2.6316;0.7457;0.65112 -;-;-;-;-;-;- 164 + 1 2.171 91492.0 1.0 2117 4244 6359 HBL1_DMSO_200M_050219_2,6363 HBL1_DMSO_200M_050219_2,6363,VGPTTGRPQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6364 33.573 800.0 160990.0 25 0 6851.6 7685 EKPYACSYCA 10 153 378.8247492903568 1133.4524184712704 3 378.8242675662041 MULTI CID FTMS 0 0 0 6359 170717.84375 1.0 0 0.0 5 Unmodified _EKPYACSYCA_ ENSG00000236609|ENST00000457543|ZNF853 13.90604991867851 0.6142120002215601 4 [EP][YK]A 5 6 30.744 0.0 0.0 2.7124 0.0 0.0 0.0 542.1397103016017 542.1397103016017 17.645228064085998 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.7302046884880937 0.5994850021680094 [EP][YK]A 2.7124 - 210 1 2.171 104812.3 0.6000000238418579 2118 4244 6359 HBL1_DMSO_200M_050219_2,6364 HBL1_DMSO_200M_050219_2,6364,EKPYACSYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6365 33.579 324.0 339730.0 25 0 112540.0 662 AELYKGPE 8 101 453.7336181950552 905.4526834569104 2 453.7335693240166 MULTI CID FTMS 0 0 0 6359 153325.140625 0.6577161329587011 -1 0.0574264526367187 6 Unmodified _AELYKGPE_ ENST00000491365.1_1_3:49045513-49045807:+|nuORF 26.88365393820708 0.4786498634179528 4 {[CP]|[EA]}TP{I|L}T{M(Oxidation (M))|F}K 8 6 + 41.529 0.0 0.0 4.5866 4.5866 83.049 0.0 0.0 0.0 23.80780419746588 10.326385825694937 10.326385825694937 17.266310984031428 0 0.8494850021680094 0.0 0.3807196863200844 0.1505149978319906 {[CP]|[EA]}TP{I|L}T{M(Oxidation (M))|F}K;{[CP]|[EA]}TP{I|L}[YN]V;{[CP]|[EA]}[Y{I|L}]K[WP];{[CP]|[EA]}TK[{I|L}T]{M(Oxidation (M))|F}P;[{I|L}P]{[YC]|[HE]}K[WP];{[{M(Oxidation (M))|F}D]|MM}[{I|L}T]K[WP];{[CP]|[EA]}T{[VA]|[{I|L}G]}[YV]GP 4.5866;2.6797;1.9885;1.5124;1.1739;0.4009;0.37051 -;-;-;-;-;-;- 176 + 1 2.171 89261.0 1.0 2119 4244 6359 HBL1_DMSO_200M_050219_2,6365 HBL1_DMSO_200M_050219_2,6365,AELYKGPE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6366 33.593 800.0 162260.0 25 0 31584.0 -1 0 69 1135.4796877022734 3403.4172337070204 3 1135.813769519329 MULTI CID FTMS 0 0 0 6359 144537.59375 0.4140921412610875 -1 0.0574264526367187 7 4 GC(Carbamidomethyl (C)){M(Oxidation (M))|F}Y 4 -1 11.938 0.0 0.0 0.35077 0.0 0.0 1255.4445200854125 1617.7735266329105 2873.2180467183225 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GC(Carbamidomethyl (C)){M(Oxidation (M))|F}Y 0.35077 - 66 + 1 2.171 105916.9 0.5299999713897705 2120 4244 6359 HBL1_DMSO_200M_050219_2,6366 HBL1_DMSO_200M_050219_2,6366, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6367 33.607 800.0 139560.0 25 0 43491.0 + 36212 SVYDGHGGEEV 11 93 574.746267475101 1147.477982017002 2 574.7462646365166 MULTI CID FTMS 0 0 0 6359 115943.25 0.2187244035869966 2 -0.172882080078125 8 Unmodified _SVYDGHGGEEV_ ENSG00000115241|ENST00000344034|PPM1G 17.11289562659939 0.6791789249425932 4 [VS]YD 4 7 39.297 0.0 0.0 3.4246 0.0 0.0 0.0 680.2641085260374 680.2641085260374 16.10924374808178 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.0 + [VS]YD 3.4246 + + 65 + 1 2.171 87193.4 0.5799999833106995 2121 4244 6359 HBL1_DMSO_200M_050219_2,6367 HBL1_DMSO_200M_050219_2,6367,SVYDGHGGEEV False True SVYDGHGGEEV 33.606628 574.746264636517 3016452.25 6359.0 ENSG00000115241|ENST00000344034|PPM1G 5.358352502187093 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6369 33.611 19.0 2673600.0 25 0 608750.0 + 5060 DGYEQAARV 9 69 504.7409398526873 1007.4673267721746 2 504.7411071658134 MULTI CID FTMS 0 0 0 6368 2562577.5 0.0087864179753216 8 -0.3555145263671875 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 31.26834338654808 0.1333407332142048 4 [DG]YEQAA[RV] 9 0 + 64.983 0.0 0.0 6.4501 6.4501 86.808 0.0 0.0 0.0 55.25054479347911 4.762036441594184 4.762036441594184 9.208187539523742 0 1.0228787452803376 0.958607314841775 0.4247425010840047 0.3807196863200844 + + [DG]YEQAA[RV];[DG]YE[AG]AA[RV];[DG]YEV[NG][RV];[DG]YV[DN]A[RV];[DG]YVE[NG][RV] 6.4501;5.5361;4.4141;3.761;3.2874 +;-;-;-;- + 108 + 1 2.189 43943.4 1.0 2122 4245 6368 HBL1_DMSO_200M_050219_2,6369 HBL1_DMSO_200M_050219_2,6369,DGYEQAARV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6370 33.613 80.0 432960.0 25 0 69515.0 + 26694 NYNNQSSNF 9 68 544.2257143098234 1086.436875686447 2 544.2259399294853 MULTI CID FTMS 0 0 0 6368 518103.9375 0.677089283119527 1 -0.0997428894042968 2 Unmodified _NYNNQSSNF_ chr12:54282662-54282800|48|694.65|0.0|26.05|+|ENST00000677249|HNRNPA1,HNRNPA1;chr12:54283967-54284240|48|13.83|0.0|20.4|+|ENST00000677375|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;ENST00000432375.1_1_6:32293532-32293889:+|nuORF;ENST00000444886.1_1_9:128358610-128358904:+|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1 28.486842064014134 0.1687311288560894 4 N{M(Oxidation (M))|F} 2 7 19.706 0.0 0.0 1.8138 0.0 0.0 807.3155205612499 0.0 807.3155205612499 0.0 11.607281392838829 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 + N{M(Oxidation (M))|F} 1.8138 + + 48 + 1 2.189 33936.0 1.0 2123 4245 6368 HBL1_DMSO_200M_050219_2,6370 HBL1_DMSO_200M_050219_2,6370,NYNNQSSNF False True NYNNQSSNF 33.613248 544.225939929485 13209093.0 6368.0 ENSG00000135486|ENST00000340913|HNRNPA1;;chr12:54282662-54282800|48|694.65|0.0|26.05|+|ENST00000677249|HNRNPA1,HNRNPA1;;nc|ENSG00000135486|P09651-3|HNRNPA1;;ENST00000411857.2_1_1:179425361-179425934:-|nuORF;;ENSG00000224578|ENST00000565308|HNRNPA1L3;;chr12:54283967-54284240|48|13.83|0.0|20.4|+|ENST00000677375|HNRNPA1,HNRNPA1;;ENST00000444886.1_1_9:128358610-128358904:+|nuORF;;ENSG00000139675|ENST00000357495|HNRNPA1L2;;nc|ENSG00000135486|P09651-2|HNRNPA1;;ENST00000432375.1_1_6:32293532-32293889:+|nuORF 6.526318232218425 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6371 33.616 107.0 545480.0 25 0 61245.0 + 13300 HIYHQHFDSV 10 77 428.2037298905643 1281.589360271893 3 428.2035095095634 MULTI CID FTMS 0 0 0 6368 278513.46875 1.0 0 0.0 3 Unmodified _HIYHQHFDSV_ ENSG00000114978|ENST00000396049|MOB1A;ENST00000497054.5_1_2:74386211-74405801:-|nuORF 20.580933911654288 0.5022139299129796 4 [H{I|L}]YHQ{[{M(Oxidation (M))|F}D]|MM}HSV 10 2 + 36.889 0.0 0.0 2.8784 2.8784 66.625 0.0 0.0 0.0 9.422262144776354 11.561734207603742 9.422262144776354 3.0102999566398125 0 0.5796896906561032 1.6989700043360187 0.0 0.0 [H{I|L}]YHQ{[{M(Oxidation (M))|F}D]|MM}HSV;[H{I|L}]YHQH{[{M(Oxidation (M))|F}D]|MM}SV;[H{I|L}]YH[AG]{[{M(Oxidation (M))|F}D]|MM}HSV;[H{I|L}]YH[AG]H{[{M(Oxidation (M))|F}D]|MM}SV;[HQ]{[RE]|[WV]}Q{[{M(Oxidation (M))|F}D]|MM}HSV;[HQ]{[RE]|[WV]}QH{[{M(Oxidation (M))|F}D]|MM}SV 2.8784;2.6435;2.1633;1.9284;0.74208;0.50719 -;+;-;-;-;- + 117 1 2.189 49848.6 1.0 2124 4245 6368 HBL1_DMSO_200M_050219_2,6371 HBL1_DMSO_200M_050219_2,6371,HIYHQHFDSV False True HIYHQHFDSV 33.61551 428.203509509563 1795964.25 6368.0 ENST00000497054.5_1_2:74386211-74405801:-|nuORF;;ENSG00000114978|ENST00000396049|MOB1A 6.493767897288005 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6372 33.619 192.0 578240.0 25 0 81859.0 + 16491 KALETLRRV 9 96 362.5643674971408 1084.6712730916224 3 362.5643493533134 MULTI CID FTMS 0 0 0 6368 279732.9375 0.7226659280256075 -1 0.0731391906738281 4 Unmodified _KALETLRRV_ ENSG00000143384|ENST00000369026|MCL1;nc|ENSG00000143384|Q07820-2|MCL1 6.1918466704503565 0.6985299363762377 4 KVA{I|L} 4 7 33.8 0.0 0.0 3.1162 0.0 0.0 0.0 670.3643668372591 670.3643668372591 27.513487579716767 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 KVA{I|L} 3.1162 - 46 + 1 2.189 93566.2 1.0 2125 4245 6368 HBL1_DMSO_200M_050219_2,6372 HBL1_DMSO_200M_050219_2,6372,KALETLRRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6373 33.624 289.0 239390.0 25 0 22785.0 + 2846 AVAQQVQQV 9 97 485.76959746735486 969.5246420015096 2 485.7694579958916 MULTI CID FTMS 0 0 0 6368 217337.265625 1.0 0 0.0 5 Unmodified _AVAQQVQQV_ ENSG00000106459|ENST00000393232|NRF1;nc|ENSG00000106459|Q16656-2|NRF1;nc|ENSG00000106459|Q16656-4|NRF1 53.57557251787612 0.0325303259649373 4 {[VA]|[{I|L}G]}GQAAV 7 5 43.936 0.0 0.0 4.5317 0.0 0.0 0.0 370.1754348084035 370.1754348084035 26.210674670095365 0.0 0.0 0.0 0 0.0 2.0 0.0 1.3001648626366045 {[VA]|[{I|L}G]}GQAAV 4.5317 - 627 1 2.189 61187.6 1.0 2126 4245 6368 HBL1_DMSO_200M_050219_2,6373 HBL1_DMSO_200M_050219_2,6373,AVAQQVQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6374 33.638 800.0 288270.0 25 0 26312.0 + 45059 YPYGDGNRSV 10 143 564.2594949785671 1126.504437023934 2 564.2589599490166 MULTI CID FTMS 0 0 0 6368 162168.265625 0.0323424732244855 -7 0.542816162109375 6 Unmodified _YPYGDGNRSV_ ENSG00000156735|ENST00000287322|BAG4;ENST00000531211.1_1_8:70772071-70772629:-|nuORF;nc|ENSG00000156735|O95429-2|BAG4 76.82478488871298 0.0187167883027705 4 YPYGD[{I|L}T]PCV 10 4 + 87.828 0.0 0.0 7.7965 7.7965 82.116 0.0 0.0 0.0 47.01622290693017 3.082370005444872 3.082370005444872 2.315986760461257 0 1.6861818737241734 2.0 0.7302046884880937 0.0 YPYGD[{I|L}T]PCV;YPYGDG[RN]SV;YPYG[{I|L}T]DPCV;YPV{[WT]|[RM]}GY{[QN]|[E{I|L}]|[KN]};YPV[TA]DYPCV;YPYG[{I|L}T]PDCV;YPYV[TA]DPCV;YPV{[WT]|[RM]}YG{[QN]|[E{I|L}]|[KN]};YPV[TA]YDPCV;YPYV[TA]PDCV 7.7965;7.5909;7.035;6.5137;6.4071;6.2848;6.2735;6.0699;5.9633;5.5233 -;+;-;-;-;-;-;-;-;- + 1215 + 1 2.189 181146.7 0.6800000071525574 2127 4245 6368 HBL1_DMSO_200M_050219_2,6374 HBL1_DMSO_200M_050219_2,6374,YPYGDGNRSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6375 33.643 260.0 242360.0 25 0 20659.0 -1 VPPPVMLL 8 100 441.26365308251553 880.5127532318311 2 441.2635986208916 MULTI CID FTMS 0 0 0 6368 156477.84375 0.9846558358852864 -2 0.1305656433105468 7 Oxidation (M) _VPPPVM(Oxidation (M))LL_ ENSG00000166908|ENST00000354947|PIP4K2C;nc|ENSG00000166908|Q8TBX8-2|PIP4K2C;nc|ENSG00000166908|Q8TBX8-3|PIP4K2C 17.086550045450526 0.6584923310065985 4 VP 2 -1 35.969 0.0 0.0 4.085 0.0 0.0 0.0 681.3685188161318 681.3685188161318 20.545309728167496 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.0 0.0 VP 4.085 + + 90 + 1 2.189 49941.5 1.0 2128 4245 6368 HBL1_DMSO_200M_050219_2,6375 HBL1_DMSO_200M_050219_2,6375,VPPPVMLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6376 33.651 465.0 271790.0 25 0 49385.0 + 38535 TSSAVTTALK 10 137 489.7781703188235 977.5417877044472 2 490.2817870974541 MULTI CID FTMS 0 0 0 6368 141240.59375 0.6508456012219432 -1 0.0731391906738281 8 Unmodified _TSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 30.7034409873982 0.2788461460996952 4 {[MG]|[TS]}SAVTTAK{I|L} 10 2 + 39.836 0.0 0.0 4.0751 4.0751 68.618 0.0 0.0 0.0 5.764837301042711 2.381995291989305 2.381995291989305 2.381995291989305 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {[MG]|[TS]}SAVTTAK{I|L};{[MG]|[TS]}SAVTTA{I|L}K 4.0751;3.8314 -;+ + 510 + 1 2.189 101533.2 1.0 2129 4245 6368 HBL1_DMSO_200M_050219_2,6376 HBL1_DMSO_200M_050219_2,6376,TSSAVTTALK False True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 6377 33.665 800.0 158650.0 25 0 9677.1 + 44531 YPDSHQPRI 9 157 556.7777308245077 1111.5409087158152 2 556.7786132693291 MULTI CID FTMS 0 0 0 6368 133010.03125 0.5522586596930239 4 -0.2449111938476562 9 Unmodified _YPDSHQPRI_ ENSG00000143575|ENST00000328703|HAX1;ENST00000411473.1_1_X:147279889-147280084:-|nuORF;ENST00000435087.1_2_1:154246317-154247633:+|nuORF;ENST00000477780.2_1_1:154246158-154247548:+|nuORF;nc|ENSG00000143575|O00165-2|HAX1;nc|ENSG00000143575|O00165-3|HAX1;nc|ENSG00000143575|O00165-5|HAX1 47.594388314883695 0.0456443387682827 4 YPDSHQ{I|L}[RP] 9 2 + 79.658 0.0 0.0 7.1665 7.1665 89.875 0.0 0.0 0.0 49.22508200162774 2.922152515121226 2.922152515121226 9.208187539523747 0 0.9247425010840048 2.0 0.4247425010840047 0.0 YPDSHQ{I|L}[RP];YPDSH[AG]{I|L}[RP];YPDN[HT]{I|L}[RP];{I|L}{M(Oxidation (M))|F}DSHQ{I|L}[RP];YPDGG[HT]{I|L}[RP];{I|L}{M(Oxidation (M))|F}DSH[AG]{I|L}[RP];{I|L}{M(Oxidation (M))|F}DN[HT]{I|L}[RP];Y{I|L}C(Carbamidomethyl (C))YQ{I|L}[RP];{I|L}{M(Oxidation (M))|F}DGG[HT]{I|L}[RP];{I|L}YC(Carbamidomethyl (C))YQ{I|L}[RP] 7.1665;6.338;5.1215;5.0286;4.2931;4.2002;2.9837;2.3051;2.1553;2.0343 -;-;-;-;-;-;-;-;-;- 450 + 1 2.189 100409.6 0.6200000047683716 2130 4245 6368 HBL1_DMSO_200M_050219_2,6377 HBL1_DMSO_200M_050219_2,6377,YPDSHQPRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6378 33.679 800.0 345560.0 25 0 61724.0 + -1 GAYSCCYYD 9 164 579.6967610454224 1157.3789691576446 2 579.6969482302666 MULTI CID FTMS 0 0 0 6368 122984.140625 0.0520107179683939 -5 0.4528312683105469 10 2 Carbamidomethyl (C) _GAYSC(Carbamidomethyl (C))C(Carbamidomethyl (C))YYD_ REV__nc|ENSG00000211668|P01706|IGLV2-11 23.1484247019978 0.2366544122328345 4 QDYYY 5 -1 57.365 0.0 0.0 4.9565 0.0 0.0 407.0933094709 0.0 407.0933094709 0.0 37.54091503501385 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 1.579689690656103 QDYYY 4.9565 - 1544 1 2.189 201144.8 0.6000000238418579 2131 4245 6368 HBL1_DMSO_200M_050219_2,6378 HBL1_DMSO_200M_050219_2,6378,GAYSCCYYD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6379 33.688 482.0 239850.0 25 0 38135.0 24258 MAPPAHKSI 9 106 476.256952162498 950.499351391796 2 476.2571594119072 MULTI CID FTMS 0 0 0 6368 124580.2265625 0.0164159706313706 33 -1.0226898193359375 11 Unmodified _MAPPAHKSI_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 19.256988751693697 0.3154191944385105 4 {[DS]|[MA]|[CV]|TT}PPP 5 5 39.041 0.0 0.0 4.1074 0.0 0.0 0.0 454.2321871393188 454.2321871393188 26.82258126592544 0.0 0.0 0.0 0 0.6109243748081782 1.5228787452803376 0.0 0.0 {[DS]|[MA]|[CV]|TT}PPP 4.1074 - 108 + 1 2.189 96365.2 1.0 2132 4245 6368 HBL1_DMSO_200M_050219_2,6379 HBL1_DMSO_200M_050219_2,6379,MAPPAHKSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6380 33.703 800.0 177740.0 25 0 24781.0 + 45825 YYPDGHNDY 9 118 572.222428975292 1142.430305017384 2 572.2225829958916 MULTI CID FTMS 0 0 0 6368 114705.2890625 0.6883866643986563 -7 0.542816162109375 12 Unmodified _YYPDGHNDY_ ENSG00000141380|ENST00000415083|SS18 41.95555342248728 0.0647214845423414 4 YYPDEMYY 8 4 + 70.812 0.0 0.0 6.1984 6.1984 81.452 0.0 0.0 0.0 47.96333321506811 9.653500133247732 9.653500133247732 4.885728732517464 0 0.841129063296272 2.0 0.3807196863200844 0.0 YYPDEMYY;YYPDGHNDY;YYPT[KC]CCY;YYPDGHGGDY;YY[MN]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DY 6.1984;5.7707;5.1711;4.5929;3.9105 -;+;-;-;- + 571 + 1 2.189 108520.7 0.5299999713897705 2133 4245 6368 HBL1_DMSO_200M_050219_2,6380 HBL1_DMSO_200M_050219_2,6380,YYPDGHNDY True True YYPDGHNDY 33.702854 572.222582995892 22848013.5 6368.0 ENSG00000141380|ENST00000415083|SS18 8.126544316609701 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6381 33.706 183.0 429830.0 25 0 28055.0 + 13377 HLIHEVTKV 9 89 359.2143732326276 1074.6212902980828 3 359.2132446169853 MULTI CID FTMS 0 0 0 6368 117071.8984375 0.4426446366434491 -2 0.1305656433105468 13 Unmodified _HLIHEVTKV_ ENSG00000089597|ENST00000356638|GANAB;ENST00000524437.5_1_11:62402291-62406896:-|nuORF;nc|ENSG00000089597|Q14697-2|GANAB 41.8396318013385 0.0653578398400075 4 HEVTKV 6 3 27.558 0.0 0.0 2.5644 0.0 0.0 363.23050353526895 0.0 363.23050353526895 0.0 15.775365173610574 0.0 0.0 0 1.5629529932484498 0.0 0.0 0.3054621874040891 + HEVTKV 2.5644 + + 148 + 1 2.189 72789.3 1.0 2134 4245 6368 HBL1_DMSO_200M_050219_2,6381 HBL1_DMSO_200M_050219_2,6381,HLIHEVTKV True True HLIHEVTKV 33.706383 359.213244616985 2150135.5 6368.0 nc|ENSG00000089597|Q14697-2|GANAB;;ENST00000524437.5_1_11:62402291-62406896:-|nuORF;;ENSG00000089597|ENST00000356638|GANAB 5.980423291524251 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6383 33.712 49.0 1182800.0 25 0 272820.0 + 4248 DAPPSRVSV 9 57 464.2485375819246 926.4825222306492 2 464.2484313845634 MULTI CID FTMS 0 0 0 6382 943169.5625 0.5904368384504978 4 -0.1812553405761718 1 Unmodified _DAPPSRVSV_ ENSG00000180900|ENST00000356994|SCRIB;nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB 17.11289562659939 0.3734572693229295 4 {[DA]|[EG]}PP 4 5 41.242 0.0 0.0 4.4515 0.0 0.0 0.0 543.2874239557249 543.2874239557249 29.45947288271596 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + {[DA]|[EG]}PP 4.4515 + + 19 + 1 2.21 48452.6 1.0 2135 4246 6382 HBL1_DMSO_200M_050219_2,6383 HBL1_DMSO_200M_050219_2,6383,DAPPSRVSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6384 33.714 96.0 635590.0 25 0 118310.0 -1 PLHWVCKK 8 63 534.2951098195646 1066.575666705929 2 534.2949096560478 MULTI CID FTMS 0 0 0 6382 583488.875 0.4445634181140571 10 -0.3469085693359375 2 Carbamidomethyl (C) _PLHWVC(Carbamidomethyl (C))KK_ ENSG00000139187|ENST00000356986|KLRG1;ENST00000538029.1_1_12:9102760-9162130:+|nuORF;nc|ENSG00000139187|Q96E93|KLRG1 14.581692164780916 0.6954967302934248 4 {I|L}PPEP 5 -1 66.454 0.0 0.0 6.2306 0.0 0.0 0.0 530.2820577169525 530.2820577169525 59.463950151760656 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {I|L}PPEP 6.2306 - 34 + 1 2.21 53168.8 1.0 2136 4246 6382 HBL1_DMSO_200M_050219_2,6384 HBL1_DMSO_200M_050219_2,6384,PLHWVCKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6385 33.715 66.0 1343700.0 25 0 279220.0 + 10074 FPRTPARSV 9 75 344.1980780567317 1029.572404770395 3 344.1976196169853 MULTI CID FTMS 0 0 0 6382 743817.375 0.4268554712929113 -6 0.5525741577148438 3 Unmodified _FPRTPARSV_ ENSG00000277972|ENST00000613478|CISD3 16.149105407346934 0.3995459350917656 4 PT[PG]VE 6 6 26.911 0.0 0.0 2.6138 0.0 0.0 431.2487354962906 0.0 431.2487354962906 0.0 14.238508575887934 0.0 0.0 0 0.0 0.0 0.0 0.0 PT[PG]VE 2.6138 - 66 1 2.21 75995.0 1.0 2137 4246 6382 HBL1_DMSO_200M_050219_2,6385 HBL1_DMSO_200M_050219_2,6385,FPRTPARSV False True FPRTPARSV 33.715208 344.197619616985 43294483.5 6382.0 ENSG00000277972|ENST00000613478|CISD3 4.714292387167613 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6386 33.717 87.0 686400.0 25 0 122340.0 + 41554 VPPDTRNVV 9 57 498.77759939018216 995.5406458471645 2 498.7776367068291 MULTI CID FTMS 0 0 0 6382 635318.3125 0.8908928706961241 4 -0.1812553405761718 4 Unmodified _VPPDTRNVV_ ENSG00000275835|ENST00000615383|TUBGCP5;nc|ENSG00000275835|Q96RT8-2|TUBGCP5 12.240655878213236 0.5053430591993562 4 VPPD 4 5 56.186 0.0 0.0 5.6437 0.0 0.0 0.0 584.3154205715348 584.3154205715348 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VPPD 5.6437 + + 16 + 1 2.21 53443.4 1.0 2138 4246 6382 HBL1_DMSO_200M_050219_2,6386 HBL1_DMSO_200M_050219_2,6386,VPPDTRNVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6387 33.72 170.0 416540.0 25 0 32407.0 + 10663 FVQLCPYKGQG 11 81 620.3133317599178 1238.6121105866357 2 620.3134033083916 MULTI CID FTMS 0 0 0 6382 408745.625 0.9180072488256504 1 -0.0397491455078125 5 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 4 {[HG]|PP}AMPPPPPPQN 12 -1 {[HG]|PP}AM + + 82.605 7.167 1.809 6.6692 6.6692 59.219 0.0 0.0 0.0 0.0 63.475409843999344 0.0 0.0 0 2.774227503252014 0.0 0.0 1.6549471895720984 {[HG]|PP}AMPPPPPPQN 6.6692 - 1371 + 1 2.21 59248.7 1.0 2139 4246 6382 HBL1_DMSO_200M_050219_2,6387 HBL1_DMSO_200M_050219_2,6387,FVQLCPYKGQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6388 33.724 203.0 400000.0 25 0 57369.0 + 39514 VATITKTV 8 100 416.76063272908175 831.5067125249635 2 416.7605468630791 MULTI CID FTMS 0 0 0 6382 329667.40625 0.8233862986412908 -2 0.172882080078125 6 Unmodified _VATITKTV_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107 56.17704186161178 0.1143274477948619 4 [{I|L}T]TKTVAV 8 4 + 53.859 0.0 0.0 6.4773 6.4773 84.307 0.0 0.0 0.0 5.616042352767735 21.081152240127267 5.616042352767735 6.53212513775344 0 0.3054621874040891 1.3979400086720375 0.5501648626366046 0.0 [{I|L}T]TKTVAV;[{I|L}T]KTTVAV;[KT]T{I|L}TVAV;[KT]{I|L}TTVAV;[{I|L}T]KS[{I|L}T]AV;[KT]TV[{I|L}T]AV;[KT]{I|L}S[{I|L}T]AV;{[TV]|[{I|L}S]}[KT][{I|L}T]AV 6.4773;5.6917;5.1116;4.688;3.7659;3.1857;2.7621;0.26797 -;-;-;-;-;-;-;- 478 1 2.21 66823.0 1.0 2140 4246 6382 HBL1_DMSO_200M_050219_2,6388 HBL1_DMSO_200M_050219_2,6388,VATITKTV True True VATITKTV 33.724347 416.760546863079 2520844.0 6382.0 ENSG00000111581|ENST00000229179|NUP107;;nc|ENSG00000111581|P57740-2|NUP107 3.1115742524464927 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6389 33.728 177.0 311940.0 25 0 23002.0 -1 DAPMTPKQI 9 85 508.758311817082 1015.502070700964 2 508.7587158083916 MULTI CID FTMS 0 0 0 6382 289588.53125 0.5139284495774253 4 -0.1812553405761718 7 Oxidation (M) _DAPM(Oxidation (M))TPKQI_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1 24.020572477871973 0.2255576514309169 4 {[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T[KP]Q{I|L} 9 -1 + 31.99 0.0 0.0 3.1501 3.1501 79.803 0.0 0.0 0.0 19.36522561962896 6.219866491072711 6.219866491072711 31.98978823820021 0 0.3807196863200844 2.0 0.0 0.7302046884880937 {[DA]|[EG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T[KP]Q{I|L} 3.1501 + + 161 + 1 2.21 50998.4 1.0 2141 4246 6382 HBL1_DMSO_200M_050219_2,6389 HBL1_DMSO_200M_050219_2,6389,DAPMTPKQI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6390 33.732 196.0 430810.0 25 0 131010.0 + 40795 VLLKEQDSV 9 84 515.7932943150896 1029.5720356969791 2 515.7935058474541 MULTI CID FTMS 0 0 0 6382 211079.390625 0.4263442022838202 -3 0.2303085327148437 8 Unmodified _VLLKEQDSV_ REV__ENST00000449830.5_1_17:656175-657770:+|nuORF 10.073929032068715 0.563993802247229 4 VAK[C(Carbamidomethyl (C))R]{I|L} 6 -1 16.788 0.0 0.0 1.6306 0.0 0.0 0.0 299.1366366022094 299.1366366022094 4.085390679490079 0.0 0.0 0.0 0 0.0924778212679485 1.0969100130080565 0.0 0.0 VAK[C(Carbamidomethyl (C))R]{I|L} 1.6306 - 128 + 1 2.21 69847.3 1.0 2142 4246 6382 HBL1_DMSO_200M_050219_2,6390 HBL1_DMSO_200M_050219_2,6390,VLLKEQDSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6391 33.739 393.0 234340.0 25 0 23804.0 + 43990 YIDHGDPQV 9 111 522.242856244889 1042.471159556578 2 522.2433959841728 MULTI CID FTMS 0 0 0 6382 164618.875 0.3451674206182042 -4 0.3244361877441406 9 Unmodified _YIDHGDPQV_ ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF 52.268347100219714 0.0353964759249114 4 [HD]GD{I|L}YPQV 9 4 + 52.858 0.0 0.0 5.0705 5.0705 80.499 0.0 0.0 0.0 2.3764301679958777 41.74919076937762 2.3764301679958777 8.979400086720375 0 0.9559771852360796 0.0 0.4247425010840047 0.0 [HD]GD{I|L}YPQV;{NN|[MP]|[D{I|L}]|[EV]}{[WN]|[YH]}GDPQV;[HD]GD{I|L}YP[AG]V;[VG]A[WD]GDPQV;[HD]GD{I|L}{M(Oxidation (M))|F}{I|L}QV;[HD]G[Y{I|L}]DPQV;{[QV]|[N{I|L}]|[RA]|[KV]}[WD]GDPQV;{NN|[MP]|[D{I|L}]|[EV]}{[WN]|[YH]}GDP[AG]V;[HD][Y{I|L}]GDPQV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}D]|MM}YPQV 5.0705;4.2091;4.1872;3.7026;3.6046;3.5606;3.5167;3.3258;3.2718;3.1443 -;-;-;-;-;-;-;-;-;- 218 1 2.21 82018.0 1.0 2143 4246 6382 HBL1_DMSO_200M_050219_2,6391 HBL1_DMSO_200M_050219_2,6391,YIDHGDPQV True True YIDHGDPQV 33.738581 522.243395984173 14784802.5 6382.0 ENST00000510626.5_1_4:3131970-3189635:+|nuORF;;ENSG00000197386|ENST00000355072|HTT 7.799357414245605 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6392 33.746 423.0 267030.0 25 0 64002.0 -1 0 113 408.2142500866781 407.2069736200781 1 408.2120849490166 MULTI CID FTMS 0 0 0 6382 153969.578125 0.8971027578614875 -4 0.3244361877441406 10 4 {M(Oxidation (M))|F}{I|L}E 3 -1 + 35.164 0.0 0.0 8.6354 8.6354 94.395 0.0 0.0 0.0 12.84318117920506 10.779550148593485 10.779550148593485 10.779550148593485 0 0.4247425010840047 0.0 0.25 0.0 {M(Oxidation (M))|F}{I|L}E;{M(Oxidation (M))|F}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 8.6354;5.9882;5.3277;2.5681 -;-;-;- 33 + 1 2.21 91330.4 1.0 2144 4246 6382 HBL1_DMSO_200M_050219_2,6392 HBL1_DMSO_200M_050219_2,6392, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6394 33.757 442.0 209050.0 25 0 16389.0 -1 MPPPPPQGV 9 101 468.236188042907 934.457823152614 2 468.2367126345634 MULTI CID FTMS 0 0 0 6393 153529.703125 0.0884511438344232 50 -1.3182525634765625 1 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 20.871210003555333 0.2717241269066626 4 GV 2 -1 14.949 0.0 0.0 1.5997 0.0 0.0 760.3572657569093 0.0 760.3572657569093 0.0 -1.426675035687314 -1.426675035687314 0.0 0 0.0 0.0 0.0 0.0 GV 1.5997 + + 94 + 1 2.21 73680.4 1.0 2145 4247 6393 HBL1_DMSO_200M_050219_2,6394 HBL1_DMSO_200M_050219_2,6394,MPPPPPQGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6395 33.761 213.0 680940.0 25 0 62614.0 15709 IQTSLTSASL 10 125 340.85808499967425 1019.5524255992228 3 340.8575622439384 MULTI CID FTMS 0 0 0 6393 316352.65625 0.7757625140772065 -2 0.1394920349121093 2 Unmodified _IQTSLTSASL_ ENSG00000103197|ENST00000219476|TSC2;ENST00000497886.5_1_16:2128976-2136835:+|nuORF;ENST00000561695.1_1_16:2128976-2129273:+|nuORF;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-4|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-7|TSC2 24.020572477871973 0.4289996903560794 4 DHPN{I|L} 5 9 23.602 0.0 0.0 2.3149 0.0 0.0 425.2745533673844 0.0 425.2745533673844 0.0 7.404178299399856 0.0 0.0 0 0.242992819099939 0.0 1.25 0.0 DHPN{I|L} 2.3149 - 204 1 2.21 121628.2 1.0 2146 4247 6393 HBL1_DMSO_200M_050219_2,6395 HBL1_DMSO_200M_050219_2,6395,IQTSLTSASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6396 33.764 197.0 329670.0 25 0 31049.0 + 26096 NPHVPSTRL 9 89 510.78319074654286 1019.5518285598856 2 510.7831298708916 MULTI CID FTMS 0 0 0 6393 290957.6875 0.8149998231809433 -2 0.1394920349121093 3 Unmodified _NPHVPSTRL_ REV__ENSG00000174137|ENST00000308132|FAM53A;REV__ENST00000489363.5_2_4:1643022-1645966:-|nuORF 20.453626601364224 0.2830276176381075 4 [NP]HTR 5 -1 39.32 0.0 0.0 3.8566 0.0 0.0 0.0 411.2260836236938 411.2260836236938 12.637568051790574 0.0 0.0 0.0 0 0.2396518287104437 1.5228787452803376 0.4247425010840047 0.0 [NP]HTR 3.8566 - 232 + 1 2.21 55183.6 1.0 2147 4247 6393 HBL1_DMSO_200M_050219_2,6396 HBL1_DMSO_200M_050219_2,6396,NPHVPSTRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6397 33.778 800.0 174600.0 25 0 12821.0 + 3388 AYQYTIRAH 9 128 561.7885082317753 1121.5624635303504 2 561.7885619997978 MULTI CID FTMS 0 0 0 6393 132189.203125 0.3685592273146441 -5 0.3641853332519531 4 Unmodified _AYQYTIRAH_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 81.9152076656658 0.0170527153246128 4 AYQYT{I|L}RAH 9 0 + 114.19 0.0 0.0 10.181 10.181 93.981 0.0 0.0 0.0 82.72136139036361 14.973024840566469 14.973024840566469 9.208187539523747 0 1.774227503252014 2.0 0.75 1.0629529932484498 + + AYQYT{I|L}RAH;AY[AG]YT{I|L}RAH;AYQYT{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};AYQYTH{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};AY[AG]YT{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};AYQYHT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};AY[TA][YG]{I|L}RAH;AY[AG]YTH{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};AYQHYT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};AYQVV[YR]SH 10.181;9.3599;7.7767;7.1644;6.9556;6.739;6.462;6.3434;6.2261;6.1286 +;-;-;-;-;-;-;-;-;- + 1273 + 1 2.21 107120.5 0.6100000143051147 2148 4247 6393 HBL1_DMSO_200M_050219_2,6397 HBL1_DMSO_200M_050219_2,6397,AYQYTIRAH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6398 33.792 800.0 90971.0 25 0 5808.3 -1 YKCSVCPDY 9 122 567.7331337938937 1133.4517146545872 2 567.7336913943291 MULTI CID FTMS 0 0 0 6393 91322.609375 0.1558197402502672 3 -0.1415061950683593 5 Carbamidomethyl (C) _YKC(Carbamidomethyl (C))SVCPDY_ ENSG00000161011|ENST00000389805|SQSTM1;ENST00000466342.1_1_5:179250916-179260288:+|nuORF;nc|ENSG00000161011|Q13501-2|SQSTM1 7.910154910731844 0.6385446671287552 4 [EP]AAAKY 7 -1 40.05 0.0 0.0 3.5334 0.0 0.0 0.0 400.0630177153873 400.0630177153873 19.08040534199916 0.0 0.0 0.0 0 0.5 0.6575773191777937 0.6747425010840047 0.0 [EP]AAAKY 3.5334 - 226 1 2.21 57584.6 0.5099999904632568 2149 4247 6393 HBL1_DMSO_200M_050219_2,6398 HBL1_DMSO_200M_050219_2,6398,YKCSVCPDY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6400 33.81 800.0 72746.0 25 0 4412.8 32186 RVVDELDNQM 10 97 617.790296791338 1233.566040649476 2 617.7919799685478 MULTI CID FTMS 0 0 0 6399 52046.24609375 0.0278448497155761 6 -0.2008590698242187 1 Oxidation (M) _RVVDELDNQM(Oxidation (M))_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 40.72490554402381 0.149912226101682 4 DE{I|L}DNQ{M(Oxidation (M))|F} 7 3 61.446 0.0 0.0 4.9812 0.0 0.0 354.23848159004064 0.0 354.23848159004064 0.0 39.88662744221054 0.0 0.0 0 1.274227503252014 0.0 0.4247425010840047 0.0 + DE{I|L}DNQ{M(Oxidation (M))|F} 4.9812 + + 187 1 2.22 50170.5 0.5 2150 4248 6399 HBL1_DMSO_200M_050219_2,6400 HBL1_DMSO_200M_050219_2,6400,RVVDELDNQM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6401 33.815 271.0 431630.0 25 0 66548.0 + 17895 KQPLRLGW 8 110 333.2016977837417 0 333.2017089724541 PEAK CID FTMS 0 0 0 6399 211556.109375 1.0 0 0.0 2 Unmodified _KQPLRLGW_ REV__ENSG00000117643|ENST00000374332|MAN1C1;REV__MAN1C1|p.K495Pfs*21|1|0.06|ENSG00000117643|chr1:25780942-25780943|-/CT|frameshift_variant 2.577480529830294 0.5910327097116076 4 A 1 -1 0.83746 0.0 0.0 0.12605 0.0 0.0 508.2622690032271 82.06684290103749 590.3291119042647 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.12605 - 5 + 1 2.22 100060.5 1.0 2151 4248 6399 HBL1_DMSO_200M_050219_2,6401 HBL1_DMSO_200M_050219_2,6401,KQPLRLGW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6402 33.829 800.0 260510.0 25 0 19702.0 + 24797 MPILTMKEP 9 153 530.2841969818508 1058.5538410305014 2 530.2841064333916 MULTI CID FTMS 0 0 0 6399 166934.484375 0.5604049150769794 -1 0.0458755493164062 3 Unmodified _MPILTMKEP_ REV__ENSG00000143552|ENST00000368559|NUP210L;REV__nc|ENSG00000143552|Q5VU65-2|NUP210L 32.30548876998284 0.1201446275138228 4 MP{I|L}QQSRTV 9 -1 + 86.533 0.0 0.0 8.1746 8.1746 82.309 0.0 0.0 0.0 31.706962271689747 2.0035983378261903 2.0035983378261903 2.0035983378261903 0 1.5044321917401078 1.5228787452803376 0.805462187404089 0.8494850021680094 MP{I|L}QQSRTV;MP{I|L}QQSRS{I|L};MP{I|L}[AG]QSRTV;MP{I|L}Q[AG]SRTV;MP{I|L}[AG]QSRS{I|L};MP{I|L}Q[AG]SRS{I|L};MP{I|L}QQ[KP]{[MS]|[{M(Oxidation (M))|F}A]};MP{I|L}[AG][AG]SRTV;MP{I|L}[AG][AG]SRS{I|L};MP{I|L}[AG]Q[KP]{[MS]|[{M(Oxidation (M))|F}A]} 8.1746;7.9853;7.3047;7.3047;7.1154;7.1154;6.7178;6.439;6.2497;5.8479 -;-;-;-;-;-;-;-;-;- 436 + 1 2.22 162870.2 0.6800000071525574 2152 4248 6399 HBL1_DMSO_200M_050219_2,6402 HBL1_DMSO_200M_050219_2,6402,MPILTMKEP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6403 33.842 800.0 273520.0 25 0 38710.0 + 45866 YYQSGTRSL 9 142 537.7644097733747 1073.5142666135494 2 537.7645141482353 MULTI CID FTMS 0 0 0 6399 159700.109375 0.2271451767996678 -6 0.4100608825683594 4 Unmodified _YYQSGTRSL_ ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC 63.960520009940105 0.0238892913700936 4 YYQSGTRS{I|L} 9 0 + 93.841 0.0 0.0 8.7415 8.7415 80.691 0.0 0.0 0.0 36.47817481888637 0.7463361829690314 0.7463361829690314 0.7463361829690314 0 0.9247425010840048 2.0 1.174742501084005 0.805462187404089 + + YYQSGTRS{I|L};YYQSGTRTV;YYAGSGTRS{I|L};YYAGSGTRTV;YYQS[WK]S{I|L};YYQS[WK]TV;YYAGS[WK]S{I|L};YYAGS[WK]TV;YYQS{[WT]|[RM]}KV;YYAGS{[WT]|[RM]}KV 8.7415;8.672;8.6251;8.5556;7.5607;7.4912;7.4393;7.3697;6.7176;6.5962 +;-;-;-;-;-;-;-;-;- + 1025 + 1 2.22 164493.8 0.6700000166893005 2153 4248 6399 HBL1_DMSO_200M_050219_2,6403 HBL1_DMSO_200M_050219_2,6403,YYQSGTRSL True True YYQSGTRSL 33.842382 537.764514148235 11030082.0 6399.0 nc|ENSG00000078618|O43847-2|NRDC;;ENSG00000078618|ENST00000352171|NRDC 5.719827493031819 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6404 33.852 519.0 222630.0 25 0 23918.0 -1 ENQQMMKR 8 132 548.7495680735832 1095.4845832139663 2 548.7487060427666 MULTI CID FTMS 0 0 0 6399 109943.734375 0.4292992313197396 -7 0.5045738220214844 5 2 Oxidation (M) _ENQQM(Oxidation (M))M(Oxidation (M))KR_ ENSG00000101350|ENST00000375712|KIF3B;nc|ENSG00000101350|O15066-2|KIF3B 21.74664581756881 0.5868176546531598 4 [AG]NYTEEN[KA] 10 -1 + 47.226 0.0 0.0 4.3109 4.3109 71.612 0.0 0.0 0.0 2.483562254273864 20.64326570884305 2.483562254273864 3.428492611147973 0 0.0 1.5228787452803376 1.316901560044258 0.6861818737241735 [AG]NYTEEN[KA];{[QN]|[E{I|L}]|[KN]}YTEEN[KA];[AG]NYTEEGG[KA];{[QN]|[E{I|L}]|[KN]}[HC]Q[PG]N[KA];[AG]NE[YT]EN[KA];[AG]GGYTEEN[KA];{[QN]|[E{I|L}]|[KN]}YTEEGG[KA];[AG]EN[YT]EN[KA];[AG][HC]NQ[PG]N[KA];[AG]DQ[YT]EN[KA] 4.3109;3.998;3.4744;3.3618;3.2553;3.2357;3.1574;3.1564;3.0222;2.8921 -;-;-;-;-;-;-;-;-;- 2092 1 2.22 92937.4 1.0 2154 4248 6399 HBL1_DMSO_200M_050219_2,6404 HBL1_DMSO_200M_050219_2,6404,ENQQMMKR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6406 33.857 132.0 401000.0 25 0 32958.0 + 40193 VGPTTGRPQL 10 79 513.2905337766491 1024.566514620098 2 513.2906982302666 MULTI CID FTMS 0 0 0 6405 346367.84375 0.401316209671848 3 -0.0775642395019531 1 Unmodified _VGPTTGRPQL_ REV__ENST00000576886.5_1_16:2834849-2835800:-|nuORF 21.53697664764585 0.484802182336468 4 [VG]PTGAR 7 -1 66.503 0.0 0.0 6.4908 0.0 0.0 0.0 383.1929110162719 383.1929110162719 54.71986764517409 0.0 0.0 0.0 0 1.4291746928241125 2.0 0.3494850021680094 0.0 [VG]PTGAR 6.4908 - 102 + 1 2.22 45651.3 1.0 2155 4249 6405 HBL1_DMSO_200M_050219_2,6406 HBL1_DMSO_200M_050219_2,6406,VGPTTGRPQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6407 33.86 180.0 413490.0 25 0 44001.0 + 41799 VPVQPGSSV 9 95 435.2400722158064 868.4655914984129 2 435.2397338747978 MULTI CID FTMS 0 0 0 6405 286663.78125 0.435247641952576 4 -0.1106033325195312 2 Unmodified _VPVQPGSSV_ ENSG00000149476|ENST00000394900|TKFC;ENST00000524953.1_1_11:61110045-61110363:+|nuORF;nc|ENSG00000149476|Q3LXA3-2|TKFC 36.04419817259434 0.0971720506436186 4 [VP]QV 4 5 20.864 0.0 0.0 2.4024 0.0 0.0 0.0 442.1944455828625 442.1944455828625 3.55651869704872 0.0 0.0 0.0 0 0.3494850021680094 1.0457574905606752 0.0 0.0 [VP]QV 2.4024 - 150 1 2.22 65197.2 1.0 2156 4249 6405 HBL1_DMSO_200M_050219_2,6407 HBL1_DMSO_200M_050219_2,6407,VPVQPGSSV True True VPVQPGSSV 33.860269 435.239733874798 10318890.0 6405.0 ENSG00000149476|ENST00000394900|TKFC;;nc|ENSG00000149476|Q3LXA3-2|TKFC;;ENST00000524953.1_1_11:61110045-61110363:+|nuORF 4.522892951965332 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6408 33.862 55.0 1354400.0 25 0 227450.0 + 3390 AYQYTIRAH 9 93 374.8612280326524 1121.5618546981573 3 374.8609496951103 MULTI CID FTMS 0 0 0 6405 994992.8125 0.8925563514365104 -1 0.0595436096191406 3 Unmodified _AYQYTIRAH_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 29.84058131909904 0.1515068451768857 4 YT{I|L}RAH 6 3 29.844 0.0 0.0 2.661 0.0 0.0 362.1607010346584 0.0 362.1607010346584 0.0 17.5371440516031 0.0 0.0 0 0.0 0.0 0.0 0.25 + YT{I|L}RAH 2.661 + + 223 + 1 2.22 63732.3 1.0 2157 4249 6405 HBL1_DMSO_200M_050219_2,6408 HBL1_DMSO_200M_050219_2,6408,AYQYTIRAH False True AYQYTIRAH 33.861663 374.86094969511 14125288.0 6405.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENSG00000132182|ENST00000254508|NUP210 7.946551322937012 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6409 33.865 155.0 757760.0 25 0 96717.0 + 12881 GVYGDVHRV 9 110 334.51072822429563 1000.5103552730868 3 334.5100890994072 MULTI CID FTMS 0 0 0 6405 368405.53125 0.5963049255115618 -4 0.2449111938476562 4 Unmodified _GVYGDVHRV_ ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3;nc|ENSG00000119314|O95758|PTBP3 34.40172386719151 0.1061884637610825 4 [VG]YGDVHVR 9 2 + 74.55 0.0 0.0 7.4512 7.4512 80.003 0.0 0.0 0.0 22.81407476695494 1.7107045768063074 1.7107045768063074 1.7107045768063074 0 0.3494850021680094 2.0 0.0 0.805462187404089 [VG]YGDVHVR;[VG]YGDVHRV;[VG]YVGDHVR;[VG]VYGDHVR;[VG]YGVDHVR;[VG]YVGDHRV;[VG]VYGDHRV;[VG]YGVDHRV;[VG]YGDVVHR;[VG]VYGDVHR 7.4512;7.2802;7.0228;7.0228;6.9743;6.8518;6.8518;6.8033;6.3726;5.9441 -;+;-;-;-;-;-;-;-;- + 257 + 1 2.22 96722.9 1.0 2158 4249 6405 HBL1_DMSO_200M_050219_2,6409 HBL1_DMSO_200M_050219_2,6409,GVYGDVHRV True True GVYGDVHRV 33.864722 334.510089099407 9090004.0 6405.0 ENSG00000119314|ENST00000374257|PTBP3;;nc|ENSG00000119314|O95758-4|PTBP3;;nc|ENSG00000119314|O95758-1|PTBP3;;nc|ENSG00000119314|O95758-5|PTBP3;;nc|ENSG00000119314|O95758-7|PTBP3;;nc|ENSG00000119314|O95758|PTBP3;;nc|ENSG00000119314|O95758-2|PTBP3 7.889220078786214 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6410 33.868 196.0 336920.0 25 0 41526.0 + 4255 DAPRVGDEV 9 77 479.2355082368232 956.4564635404464 2 479.2356445193291 MULTI CID FTMS 0 0 0 6405 329535.3125 0.1454038125030128 -10 0.7389755249023438 5 Unmodified _DAPRVGDEV_ ENSG00000162783|ENST00000367577|IER5 24.99096001346401 0.2132109383330889 4 {[DA]|[EG]}[RP][VG]DEV 9 0 + 45.92 0.0 0.0 4.8011 4.8011 51.671 0.0 0.0 0.0 10.174837133936308 22.55780949711784 10.174837133936308 0.0 0 0.8807196863200843 2.0 0.0 0.0 + + {[DA]|[EG]}[RP][VG]DEV;{[DA]|[EG]}[RP][DV]GEV;{[DA]|[EG]}[RP][VG]EDV;{[DA]|[EG]}[RP][DV]ADV;{NN|[MP]|[D{I|L}]|[EV]}[NP]RDEV;{NN|[MP]|[D{I|L}]|[EV]}[NP]REDV;{[DA]|[EG]}[RP][DV]V{[DA]|[EG]};[RP]{[DA]|[EG]}[DV]GEV;[RP]{[DA]|[EG]}[VG]DEV;{[CT]|[{M(Oxidation (M))|F}G]}V[YN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V 4.8011;4.8011;4.1716;4.1716;3.1556;2.5262;2.2585;2.0032;2.0032;1.5812 +;-;-;-;-;-;-;-;-;- + 219 1 2.22 57197.8 1.0 2159 4249 6405 HBL1_DMSO_200M_050219_2,6410 HBL1_DMSO_200M_050219_2,6410,DAPRVGDEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6411 33.874 289.0 286590.0 25 0 31596.0 + 32619 SAYEQVKQV 9 113 526.2746094703621 1050.534666007524 2 526.2748290896416 MULTI CID FTMS 0 0 0 6405 241414.453125 0.314254579296367 -8 0.564117431640625 6 Unmodified _SAYEQVKQV_ ENSG00000054282|ENST00000366541|SDCCAG8;nc|ENSG00000054282|Q86SQ7-2|SDCCAG8;nc|ENSG00000054282|Q86SQ7-3|SDCCAG8;nc|ENSG00000054282|Q86SQ7-4|SDCCAG8 99.7552728972412 0.0110101799492648 4 {[SA]|[TG]}YEQVKQV 9 0 + 89.803 0.0 0.0 8.5483 8.5483 92.767 0.0 0.0 0.0 44.99159686636801 14.749321833847873 14.749321833847873 9.208187539523747 0 1.9361818737241727 1.6989700043360187 0.3252574989159953 1.579689690656103 + + {[SA]|[TG]}YEQVKQV;{[SA]|[TG]}YE[AG]VKQV;{[SA]|[TG]}YEQVK[AG]V;{[SA]|[TG]}YE[AG]VK[AG]V;[YE]QVKQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}Y[TP]KQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QV]|[N{I|L}]|[RA]|[KV]}KQV{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}KQEY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QV]|[N{I|L}]|[RA]|[KV]}EYKQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[YE][AG]VKQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8.5483;7.6718;7.3094;6.437;3.7046;3.6546;3.4617;3.4235;3.072;2.823 +;-;-;-;-;-;-;-;-;- + 1006 + 1 2.22 68416.0 1.0 2160 4249 6405 HBL1_DMSO_200M_050219_2,6411 HBL1_DMSO_200M_050219_2,6411,SAYEQVKQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6412 33.888 800.0 208200.0 25 0 24348.0 + 44827 YPNPYSKHV 9 157 368.8547555163086 1103.5424371491258 3 368.8539611697197 MULTI CID FTMS 0 0 0 6405 116764.9375 0.4752044573969987 -21 1.235260009765625 7 Unmodified _YPNPYSKHV_ ENSG00000169230|ENST00000303204|PRELID1;ENST00000511309.5_1_5:176730986-176733129:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1 26.268140514670165 0.1969607489560049 4 YPNPY[KS]VH 9 2 + 53.108 0.0 0.0 4.8125 4.8125 67.214 0.0 0.0 0.0 26.478174818886373 0.2227639471115239 0.2227639471115239 0.2227639471115239 0 0.3054621874040891 1.0 0.4247425010840047 0.0 YPNPY[KS]VH;YPNPY[KS]HV;YPNVVYNVH;YPNVVYNHV;YPGGPY[KS]VH;YPGGPY[KS]HV;YPGGVVYNVH;YPNVVYGGVH;YPGGVVYNHV;YPNVVYGGHV 4.8125;4.7923;4.0109;3.9907;3.9781;3.9579;3.1765;3.1765;3.1563;3.1563 -;+;-;-;-;-;-;-;-;- + 382 + 1 2.22 138822.4 0.4600000083446502 2161 4249 6405 HBL1_DMSO_200M_050219_2,6412 HBL1_DMSO_200M_050219_2,6412,YPNPYSKHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6414 33.892 11.0 5467200.0 25 0 566810.0 + 45060 YPYGDGNRSV 10 53 564.2594949785671 1126.504437023934 2 564.2598144412041 MULTI CID FTMS 0 0 0 6413 4956012.0 0.9884158580130896 -2 0.0956306457519531 1 Unmodified _YPYGDGNRSV_ ENSG00000156735|ENST00000287322|BAG4;ENST00000531211.1_1_8:70772071-70772629:-|nuORF;nc|ENSG00000156735|O95429-2|BAG4 22.65808497894818 0.4596126414678359 4 YPYGD 5 5 67.206 0.0 0.0 5.9659 0.0 0.0 0.0 528.2531480425165 528.2531480425165 60.21652514092061 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + YPYGD 5.9659 + + 47 + 1 2.236 53085.0 1.0 2162 4250 6413 HBL1_DMSO_200M_050219_2,6414 HBL1_DMSO_200M_050219_2,6414,YPYGDGNRSV False True YPYGDGNRSV 33.892422 564.259814441204 195453744.0 6413.0 ENSG00000156735|ENST00000287322|BAG4;;ENST00000531211.1_1_8:70772071-70772629:-|nuORF;;nc|ENSG00000156735|O95429-2|BAG4 6.948077042897542 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6415 33.894 58.0 943740.0 25 0 209610.0 + 5061 DGYEQAARV 9 72 504.7409398526873 1007.4673267721746 2 504.7410461306572 MULTI CID FTMS 0 0 0 6413 917413.0625 0.0031455730112142 13 -0.2756233215332031 2 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 36.12702656103203 0.0967173616627612 4 [YG]DEQAA[RV] 9 2 [YG]D + + 35.947 23.468 7.003 3.5681 3.5681 47.35 0.0 0.0 0.0 0.0 12.479334554485249 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.3807196863200844 [YG]DEQAA[RV] 3.5681 - 114 + 1 2.236 51090.8 1.0 2163 4250 6413 HBL1_DMSO_200M_050219_2,6415 HBL1_DMSO_200M_050219_2,6415,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6416 33.898 204.0 356900.0 25 0 182170.0 -1 0 66 415.225869313818 414.218592847218 1 415.2260009646416 MULTI CID FTMS 0 0 0 6413 216236.875 0.8362274258517636 3 -0.0745162963867187 3 4 M 1 -1 1.1092 0.0 0.0 0.26779 0.0 0.0 148.1101771751461 132.0456942193969 280.15587139454306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.26779 - 4 + 1 2.236 62103.8 1.0 2164 4250 6413 HBL1_DMSO_200M_050219_2,6416 HBL1_DMSO_200M_050219_2,6416, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6417 33.904 323.0 205170.0 25 0 17225.0 -1 0 103 442.2326744878114 441.22539802121145 1 442.2301818728447 MULTI CID FTMS 0 0 0 6413 105546.734375 0.6645858036018926 -15 1.078960418701172 4 4 [PS]PAA 5 -1 + 24.69 0.0 0.0 5.5957 5.5957 86.123 0.0 0.0 0.0 3.8024937611541567 10.085679301909597 3.8024937611541567 12.429082168446795 0 0.2215141619232908 0.5086383061657274 0.3494850021680094 0.0 [PS]PAA;[QP][TP];[Y{M(Oxidation (M))|F}]{I|L};[PA]G[TP];[QT]PP 5.5957;2.7788;2.1907;0.38687;0.33324 -;-;-;-;- 45 1 2.236 59612.9 1.0 2165 4250 6413 HBL1_DMSO_200M_050219_2,6417 HBL1_DMSO_200M_050219_2,6417, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6418 33.915 634.0 171890.0 25 0 23015.0 + 38738 TVADKIHSV 9 123 485.27163279498353 968.5287126567672 2 485.2707702517509 MULTI CID FTMS 0 0 0 6413 97469.6484375 0.2859068254835873 -8 0.5056915283203125 5 Unmodified _TVADKIHSV_ ENSG00000276023|ENST00000617516|DUSP14 38.17557092003332 0.0854718145212029 4 {[TV]|[{I|L}S]}ADK{I|L}HSV 9 0 + 55.614 0.0 0.0 5.7421 5.7421 80.806 0.0 0.0 0.0 14.409691691163324 9.24279286061882 9.24279286061882 6.020599913279625 0 0.75 2.0 0.7302046884880937 0.0 + + {[TV]|[{I|L}S]}ADK{I|L}HSV;{[TV]|[{I|L}S]}ADK{I|L}SHV;{[TV]|[{I|L}S]}N{I|L}HSVTV;{[TV]|[{I|L}S]}ADK{I|L}SVH;{[TV]|[{I|L}S]}A[VG]HSVTV;{[TV]|[{I|L}S]}A[HK]DVTV;{[TV]|[{I|L}S]}ADKVTHV;{[TV]|[{I|L}S]}GG{I|L}HSVTV;{[TV]|[{I|L}S]}ADVKHTV;{[TV]|[{I|L}S]}ADKVTVH 5.7421;5.1205;4.9074;4.7878;4.7487;4.1184;4.0407;3.9567;3.7878;3.708 +;-;-;-;-;-;-;-;-;- + 971 + 1 2.236 87231.5 1.0 2166 4250 6413 HBL1_DMSO_200M_050219_2,6418 HBL1_DMSO_200M_050219_2,6418,TVADKIHSV True True TVADKIHSV 33.914671 485.270770251751 2386727.0 6413.0 ENSG00000276023|ENST00000617516|DUSP14 6.628620147705078 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6420 33.919 30.0 1603200.0 25 0 352540.0 + 43721 YDDEDYDSH 9 73 579.6967610454224 1157.3789691576446 2 579.6970703005791 MULTI CID FTMS 0 0 0 6419 1813161.625 0.7667967384228719 1 -0.0144386291503906 1 Unmodified _YDDEDYDSH_ REV__ENSG00000122728|ENST00000242310|TAF1L;REV__ENSG00000147133|ENST00000423759|TAF1;REV__nc|ENSG00000147133|P21675-1|TAF1;REV__nc|ENSG00000147133|P21675-13|TAF1;REV__nc|ENSG00000147133|P21675-15|TAF1;REV__nc|ENSG00000147133|P21675-16|TAF1;REV__nc|ENSG00000147133|P21675-17|TAF1;REV__nc|ENSG00000147133|P21675-18|TAF1;REV__nc|ENSG00000147133|P21675-19|TAF1;REV__nc|ENSG00000147133|P21675-20|TAF1;REV__nc|ENSG00000147133|P21675-21|TAF1;REV__nc|ENSG00000147133|P21675-22|TAF1;REV__nc|ENSG00000147133|P21675-23|TAF1;REV__nc|ENSG00000147133|P21675-24|TAF1;REV__nc|ENSG00000147133|P21675-25|TAF1;REV__nc|ENSG00000147133|P21675|TAF1 15.847184025352805 0.4077185912009129 4 DY 2 -1 19.341 0.0 0.0 1.6711 0.0 0.0 861.2787016789322 0.0 861.2787016789322 0.0 11.241961303643231 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 DY 1.6711 + + 54 + 1 2.236 41404.2 1.0 2167 4251 6419 HBL1_DMSO_200M_050219_2,6420 HBL1_DMSO_200M_050219_2,6420,YDDEDYDSH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6421 33.929 550.0 199370.0 25 0 39025.0 + 38536 TSSAVTTALK 10 129 489.7781703188235 977.5417877044472 2 489.7769958376884 MULTI CID FTMS 0 0 0 6419 130978.515625 0.3558892649604785 3 -0.0781898498535156 2 Unmodified _TSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 46.0223103267499 0.103496714999793 4 TSSAVTTA{I|L}K 10 0 + 93.179 0.0 0.0 9.532 9.532 84.555 0.0 0.0 0.0 36.53212513775345 2.43575575842074 2.43575575842074 2.43575575842074 0 0.6861818737241735 2.0 0.3807196863200844 0.1643943297944484 + + TSSAVTTA{I|L}K;TSSAVTTAK{I|L};TSS[{I|L}T]GTA{I|L}K;TSS[{I|L}T]GTAK{I|L};TS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TTA{I|L}K;TS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TTAK{I|L};TSS[{I|L}T][QT]{I|L}K;TSS[{I|L}T][QT]K{I|L};TSS[{I|L}T][RK]SV 9.532;9.2828;7.7997;7.5505;6.9861;6.7369;5.8292;5.5801;4.0233 +;-;-;-;-;-;-;-;- + 390 + 1 2.236 89169.0 1.0 2168 4251 6419 HBL1_DMSO_200M_050219_2,6421 HBL1_DMSO_200M_050219_2,6421,TSSAVTTALK True True TSSAVTTALK 33.929107 489.776995837688 4797579.5 6419.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 8.011091550191244 2.0 True 10.0 False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 6423 33.935 190.0 251750.0 25 0 23373.0 + 964 AFNEETHSY 9 95 549.2300201896039 1096.4454874460075 2 549.2303954958916 MULTI CID FTMS 0 0 0 6422 99967.328125 0.6971924256669845 1 -0.0330390930175781 1 Unmodified _AFNEETHSY_ ENSG00000185917|ENST00000332131|SETD4;nc|ENSG00000185917|Q9NVD3-3|SETD4;nc|ENSG00000185917|Q9NVD3-4|SETD4 32.30548876998284 0.1201446275138228 4 {[QN]|[E{I|L}]|[KN]}YTEEN{[CP]|[EA]} 9 8 + 35.843 0.0 0.0 3.269 3.269 76.197 0.0 0.0 0.0 2.134679910804408 2.134679910804408 2.134679910804408 9.208187539523756 0 0.3807196863200844 0.0 0.6022338482433752 0.6382104921644451 {[QN]|[E{I|L}]|[KN]}YTEEN{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}YTEEGG{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}NEET[C(Carbamidomethyl (C))N]{I|L};{[QN]|[E{I|L}]|[KN]}[HC]Q[PG]N{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}[HC]Q[HM]{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}[HC]QSY{[MS]|[{M(Oxidation (M))|F}A]};{[MS]|[{M(Oxidation (M))|F}A]}GGEET[C(Carbamidomethyl (C))N]{I|L};[HS]EEQ[PG]N{[CP]|[EA]};[HS]EEQSY{[MS]|[{M(Oxidation (M))|F}A]};{[QN]|[E{I|L}]|[KN]}Y[YE]Y{[MS]|[{M(Oxidation (M))|F}A]} 3.269;2.4292;2.4157;2.1637;1.8425;1.7611;1.5759;1.4608;1.0581;1.0455 -;-;-;-;-;-;-;-;-;- 271 1 2.236 41707.9 1.0 2169 4252 6422 HBL1_DMSO_200M_050219_2,6423 HBL1_DMSO_200M_050219_2,6423,AFNEETHSY True True AFNEETHSY 33.935309 549.230395495892 1928588.0 6422.0 nc|ENSG00000185917|Q9NVD3-4|SETD4;;ENSG00000185917|ENST00000332131|SETD4;;nc|ENSG00000185917|Q9NVD3-3|SETD4 6.56896464029948 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6424 33.946 609.0 217360.0 25 0 14405.0 + 41161 VPARQPTI 8 144 441.26365308251553 880.5127532318311 2 441.2635375857353 MULTI CID FTMS 0 0 0 6422 113078.15625 0.7115580314399031 5 -0.1506614685058593 2 Unmodified _VPARQPTI_ ENSG00000038532|ENST00000409790|CLEC16A;ENST00000261657.5_1_16:11260358-11272544:+|nuORF;nc|ENSG00000038532|Q2KHT3-3|CLEC16A 21.74664581756881 0.5868176546531598 4 VP 2 6 35.727 0.0 0.0 4.0575 0.0 0.0 0.0 681.3701518007814 681.3701518007814 19.65198257135194 0.0 0.0 0.0 0 0.3252574989159953 1.3010299956639813 0.0 0.0 + VP 4.0575 + + 338 + 1 2.236 107029.7 1.0 2170 4252 6422 HBL1_DMSO_200M_050219_2,6424 HBL1_DMSO_200M_050219_2,6424,VPARQPTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6425 33.948 112.0 695230.0 25 0 105120.0 + 18334 KVLERVNAV 9 83 514.3164768621723 1026.6184007911445 2 514.3166992068291 MULTI CID FTMS 0 0 0 6422 540877.0 0.1546415634815387 -12 0.7753067016601562 3 Unmodified _KVLERVNAV_ ENSG00000100911|ENST00000216802|PSME2;ENST00000442824.1_1_5:97549420-97549822:+|nuORF;ENST00000453033.1_1_13:49345602-49345743:+|nuORF;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;ENST00000559359.1_1_14:24613399-24613677:-|nuORF 43.77239144664712 0.0547478964384323 4 KV{I|L}E 4 5 55.394 0.0 0.0 5.3958 0.0 0.0 0.0 554.3056734674436 554.3056734674436 31.463278596586832 0.0 0.0 0.0 0 0.9247425010840048 1.2218487496163564 0.3494850021680094 0.0 + KV{I|L}E 5.3958 + + 82 + 1 2.236 64980.0 1.0 2171 4252 6422 HBL1_DMSO_200M_050219_2,6425 HBL1_DMSO_200M_050219_2,6425,KVLERVNAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6426 33.962 800.0 48489.0 25 0 10776.0 -1 0 38 998.7435105387702 2993.2087022165106 3 999.0789062380792 MULTI CID FTMS 0 0 0 6422 68238.640625 0.4392463337997079 -8 0.3956146240234375 4 4 W 1 -1 8.9794 0.0 0.0 0.29999 0.0 0.0 2091.7984371792045 712.3247164361936 2804.123153615398 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 W 0.29999 - 12 + 1 2.236 43943.0 0.3799999952316284 2172 4252 6422 HBL1_DMSO_200M_050219_2,6426 HBL1_DMSO_200M_050219_2,6426, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6428 33.968 98.0 590700.0 25 0 136560.0 + 4249 DAPPSRVSV 9 68 464.2485375819246 926.4825222306492 2 464.2485229372978 MULTI CID FTMS 0 0 0 6427 539605.875 0.3378005392792926 11 -0.2367401123046875 1 Unmodified _DAPPSRVSV_ ENSG00000180900|ENST00000356994|SCRIB;nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB 17.11289562659939 0.3734572693229295 4 {[DA]|[EG]}PP 4 5 38.06 0.0 0.0 4.108 0.0 0.0 0.0 543.2891329400999 543.2891329400999 25.84121882396211 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[DA]|[EG]}PP 4.108 + + 11 + 1 2.246 51975.4 1.0 2173 4253 6427 HBL1_DMSO_200M_050219_2,6428 HBL1_DMSO_200M_050219_2,6428,DAPPSRVSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6429 33.982 800.0 182370.0 25 0 24677.0 + 45826 YYPDGHNDY 9 130 572.222428975292 1142.430305017384 2 572.2224609255791 MULTI CID FTMS 0 0 0 6427 137972.71875 0.8280226693520211 1 -0.0307121276855468 2 Unmodified _YYPDGHNDY_ ENSG00000141380|ENST00000415083|SS18 29.081581746732265 0.1611639662936252 4 YYPT[KC]DD 8 5 46.691 0.0 0.0 4.087 0.0 0.0 0.0 154.01453577213127 154.01453577213127 5.558232855649891 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.7134679910804405 0.805462187404089 YYPT[KC]DD 4.087 - 525 + 1 2.246 109460.8 0.6499999761581421 2174 4253 6427 HBL1_DMSO_200M_050219_2,6429 HBL1_DMSO_200M_050219_2,6429,YYPDGHNDY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6430 33.986 224.0 245880.0 25 0 20795.0 + -1 GATNVCTEGL 10 95 511.2344832673007 1020.4544136014014 2 511.2347900271416 MULTI CID FTMS 0 0 0 6427 206079.375 0.9939066034892852 4 -0.1176223754882812 3 Carbamidomethyl (C) _GATNVC(Carbamidomethyl (C))TEGL_ REV__CON__ENSEMBL:ENSBTAP00000016046 8.745405648335112 0.6861838735306406 4 {[DA]|[EG]}{I|L} 3 -1 19.41 0.0 0.0 1.9021 0.0 0.0 0.0 718.2842835567326 718.2842835567326 0.4479024067207504 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[DA]|[EG]}{I|L} 1.9021 + + 264 1 2.246 45545.8 1.0 2175 4253 6427 HBL1_DMSO_200M_050219_2,6430 HBL1_DMSO_200M_050219_2,6430,GATNVCTEGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6431 33.993 373.0 277380.0 25 0 47762.0 + 15131 INLEYEAQHSV 11 98 434.8819719445425 0 434.8821899294853 PEAK CID FTMS 0 0 0 6427 141206.328125 0.5822098437165701 44 -1.1022300720214844 4 Unmodified _INLEYEAQHSV_ REV__ENSG00000140995|ENST00000563594|DEF8;REV__ENST00000452760.2_1_17:20516367-20517318:+|nuORF;REV__nc|ENSG00000140995|Q6ZN54-3|DEF8;REV__nc|ENSG00000140995|Q6ZN54-4|DEF8;REV__nc|ENSG00000140995|Q6ZN54-6|DEF8;REV__nc|ENSG00000140995|Q6ZN54|DEF8 5.731851221503515 0.47618401536486 4 S 1 -1 10.485 0.0 0.0 1.2082 0.0 0.0 134.37356288188886 643.3223971002561 777.695959982145 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 S 1.2082 + + 76 + 1 2.246 85576.5 1.0 2176 4253 6427 HBL1_DMSO_200M_050219_2,6431 HBL1_DMSO_200M_050219_2,6431,INLEYEAQHSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6433 33.998 37.0 2296200.0 25 0 545170.0 28264 PRFTPKRE 8 68 344.1980780567317 1029.572404770395 3 344.1976806521416 MULTI CID FTMS 0 0 0 6432 1455321.125 0.83516707941167 2 -0.0604248046875 1 Unmodified _PRFTPKRE_ ENST00000537236.2_1_12:110006587-110011320:-|nuORF 18.1463463914782 0.6428359029697936 4 RAPT[PG]VE 8 5 34.148 0.0 0.0 3.3167 0.0 0.0 204.11120803047032 0.0 204.11120803047032 0.0 24.1090030539564 0.0 0.0 0 0.0 0.0 0.0 0.7059771852360797 RAPT[PG]VE 3.3167 - 49 1 2.246 75324.3 1.0 2177 4254 6432 HBL1_DMSO_200M_050219_2,6433 HBL1_DMSO_200M_050219_2,6433,PRFTPKRE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6434 34.001 142.0 436680.0 25 0 39873.0 + 43991 YIDHGDPQV 9 88 522.242856244889 1042.471159556578 2 522.2432739138603 MULTI CID FTMS 0 0 0 6432 434505.625 0.9110570451009988 4 -0.1002731323242187 2 Unmodified _YIDHGDPQV_ ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF 37.97399986684836 0.0865783450051559 4 [HD]GD{I|L}YPQV 9 4 + 56.641 0.0 0.0 5.4333 5.4333 83.34 0.0 0.0 0.0 12.97569463554474 44.650954417670974 12.97569463554474 9.208187539523747 0 0.7302046884880937 1.0969100130080565 0.4247425010840047 0.0 [HD]GD{I|L}YPQV;[HD]GD{I|L}YP[AG]V;[HD][Y{I|L}]GDPQV;[HD]G[Y{I|L}]DPQV;{NN|[MP]|[D{I|L}]|[EV]}{[WN]|[YH]}GDPQV;[QP]{[CA]|SS}WDPQV;{NN|[MP]|[D{I|L}]|[EV]}[NG]WDPQV;[HD][Y{I|L}]GDP[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}[WD]GDPQV;[HD]G[Y{I|L}]DP[AG]V 5.4333;4.55;4.5009;4.2122;4.1615;3.9706;3.8727;3.6176;3.5129;3.3289 -;-;-;-;-;-;-;-;-;- 162 1 2.246 57247.4 1.0 2178 4254 6432 HBL1_DMSO_200M_050219_2,6434 HBL1_DMSO_200M_050219_2,6434,YIDHGDPQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6435 34.003 129.0 568380.0 25 0 28404.0 + 3830 DAIRVTKTV 9 99 501.8010450827645 1001.587537232329 2 501.8007079958916 MULTI CID FTMS 0 0 0 6432 489414.5625 0.094914471883297 -13 0.7054328918457031 3 Unmodified _DAIRVTKTV_ ENSG00000120008|ENST00000263461|WDR11 39.92294525591503 0.0758795494663778 4 {[DA]|[EG]}{I|L}RVTKTV 9 0 + 63.369 0.0 0.0 6.3268 6.3268 90.24 0.0 0.0 0.0 13.988442819649798 42.19283671315789 13.988442819649798 17.817530396199395 0 1.4916440611282624 1.2218487496163564 0.6505149978319906 0.0 + + {[DA]|[EG]}{I|L}RVTKTV;[VG][KQ]AATKTV;{[TV]|[{I|L}S]}[RK]{I|L}ADTV;[VG][KQ]KKDTV;[KT][RV]{I|L}ADTV 6.3268;4.5479;4.0685;2.8903;2.3349 +;-;-;-;- + 320 1 2.246 61452.2 1.0 2179 4254 6432 HBL1_DMSO_200M_050219_2,6435 HBL1_DMSO_200M_050219_2,6435,DAIRVTKTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6436 34.006 132.0 447260.0 25 0 78529.0 + 41555 VPPDTRNVV 9 57 498.77759939018216 995.5406458471645 2 498.7776672244072 MULTI CID FTMS 0 0 0 6432 387560.09375 0.543466979771965 12 -0.2382698059082031 4 Unmodified _VPPDTRNVV_ ENSG00000275835|ENST00000615383|TUBGCP5;nc|ENSG00000275835|Q96RT8-2|TUBGCP5 12.240655878213236 0.5053430591993562 4 VPPD 4 5 56.186 0.0 0.0 5.6437 0.0 0.0 0.0 584.3163677424152 584.3163677424152 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VPPD 5.6437 + + 11 + 1 2.246 53038.5 1.0 2180 4254 6432 HBL1_DMSO_200M_050219_2,6436 HBL1_DMSO_200M_050219_2,6436,VPPDTRNVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6437 34.009 171.0 355910.0 25 0 58665.0 -1 PLHWVCKK 8 60 534.2951098195646 1066.575666705929 2 534.2942993044853 MULTI CID FTMS 0 0 0 6432 296911.84375 0.2262187846101553 18 -0.4204216003417969 5 Carbamidomethyl (C) _PLHWVC(Carbamidomethyl (C))KK_ ENSG00000139187|ENST00000356986|KLRG1;ENST00000538029.1_1_12:9102760-9162130:+|nuORF;nc|ENSG00000139187|Q96E93|KLRG1 20.871210003555333 0.6025813472596342 4 {I|L}PPEP 5 -1 66.454 0.0 0.0 6.2306 0.0 0.0 0.0 530.2830294244749 530.2830294244749 59.463950151760656 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {I|L}PPEP 6.2306 - 18 + 1 2.246 59436.5 1.0 2181 4254 6432 HBL1_DMSO_200M_050219_2,6437 HBL1_DMSO_200M_050219_2,6437,PLHWVCKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6438 34.015 290.0 339710.0 25 0 23557.0 + 10664 FVQLCPYKGQG 11 96 620.3133317599178 1238.6121105866357 2 620.3130981326103 MULTI CID FTMS 0 0 0 6432 266888.1875 0.5994077386172375 9 -0.1703948974609375 6 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 4 {[HG]|PP}AMPPPPPPQN 12 -1 {[HG]|PP}AM + + 81.228 10.177 2.5689 6.558 6.558 58.833 0.0 0.0 0.0 0.0 64.55304628242637 0.0 0.0 0 2.774227503252014 0.0 0.0 2.0400990676322905 {[HG]|PP}AMPPPPPPQN 6.558 - 2521 + 1 2.246 78741.9 1.0 2182 4254 6432 HBL1_DMSO_200M_050219_2,6438 HBL1_DMSO_200M_050219_2,6438,FVQLCPYKGQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6440 34.022 303.0 229140.0 25 0 26583.0 + 36613 TAPRAMAV 8 104 408.7233404305659 0 408.7230712771416 PEAK CID FTMS 0 0 0 6439 187245.109375 1.0 0 0.0 1 Unmodified _TAPRAMAV_ ENSG00000172053|ENST00000306125|QARS1;ENST00000470113.2_1_3:49135784-49136686:-|nuORF;nc|ENSG00000172053|P47897-2|QARS1 18.13498045792455 0.4501116112875982 4 VH 2 8 12.206 0.0 0.0 1.4969 0.0 0.0 172.0844844817563 404.19809678174 576.2825812634962 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 VH 1.4969 - 37 + 1 2.246 59502.8 1.0 2183 4255 6439 HBL1_DMSO_200M_050219_2,6440 HBL1_DMSO_200M_050219_2,6440,TAPRAMAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6441 34.03 407.0 319350.0 25 0 28885.0 + 36245 SYAPRRGEF 9 119 361.5175220489346 1081.530736747004 3 361.5174438357353 MULTI CID FTMS 0 0 0 6439 150592.046875 0.0772025995349656 -12 0.5383567810058594 2 Unmodified _SYAPRRGEF_ ENSG00000197157|ENST00000354725|SND1 24.020572477871973 0.2255576514309169 4 SY{M(Oxidation (M))|F}E 4 6 55.433 0.0 0.0 5.1254 0.0 0.0 0.0 552.3019918754613 552.3019918754613 42.95880017344075 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 SY{M(Oxidation (M))|F}E 5.1254 - 44 + 1 2.246 108059.5 1.0 2184 4255 6439 HBL1_DMSO_200M_050219_2,6441 HBL1_DMSO_200M_050219_2,6441,SYAPRRGEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6442 34.04 557.0 219200.0 25 0 29238.0 25034 MPSRPELL 8 129 471.7566710214138 941.4987891096276 2 471.7575256228447 MULTI CID FTMS 0 0 0 6439 96187.84375 0.3450708188620103 41 -1.0460853576660156 3 Unmodified _MPSRPELL_ ENSG00000143514|ENST00000343537|TP53BP2;ENST00000481128.1_1_1:223989797-223991008:-|nuORF;nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2 15.847184025352805 0.6768015514314958 4 MPP 3 5 42.809 0.0 0.0 4.5469 0.0 0.0 0.0 613.3316744440061 613.3316744440061 29.654190996213025 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 MPP 4.5469 - 188 + 1 2.246 98942.1 1.0 2185 4255 6439 HBL1_DMSO_200M_050219_2,6442 HBL1_DMSO_200M_050219_2,6442,MPSRPELL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6443 34.053 800.0 54779.0 25 0 2865.2 -1 0 52 874.6423308306893 4368.175271820446 5 875.0426513552666 MULTI CID FTMS 0 0 0 6439 80433.328125 0.7237921250622437 -15 0.8606224060058594 4 4 AE 2 -1 7.9588 0.0 0.0 0.1822 0.0 0.0 3628.82457709564 536.2462862604124 4165.0708633560525 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AE 0.1822 - 15 + 1 2.246 40066.5 0.4099999964237213 2186 4255 6439 HBL1_DMSO_200M_050219_2,6443 HBL1_DMSO_200M_050219_2,6443, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6445 34.064 407.0 214340.0 25 0 16713.0 + 3389 AYQYTIRAH 9 96 561.7885082317753 1121.5624635303504 2 561.7887451052666 MULTI CID FTMS 0 0 0 6444 175559.46875 0.4894806884423406 4 -0.0507278442382812 1 Unmodified _AYQYTIRAH_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 71.70789743142352 0.0204387454931768 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QYT{I|L}RAH 9 0 + 86.71 0.0 0.0 7.7312 7.7312 91.335 0.0 0.0 0.0 57.78205299454001 14.973024840566469 14.973024840566469 9.208187539523747 0 1.579689690656103 2.0 0.3054621874040891 0.8807196863200843 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QYT{I|L}RAH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]YT{I|L}RAH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QYT{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]YT{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QH[VP]{[TV]|[{I|L}S]}AH;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QYH[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[TP][KA]A{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[PG]T{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[TP][KA]AG{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TA]YG{I|L}RAH 7.7312;6.9102;6.2159;5.3949;4.4974;4.4577;4.398;4.3805;4.3372;4.0563 +;-;-;-;-;-;-;-;-;- + 455 + 1 2.264 70515.6 1.0 2187 4256 6444 HBL1_DMSO_200M_050219_2,6445 HBL1_DMSO_200M_050219_2,6445,AYQYTIRAH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6446 34.066 64.0 1252500.0 25 0 112610.0 4401 DAVRIKTSI 9 114 334.86991941719305 1001.5879288517792 3 334.8693420290947 MULTI CID FTMS 0 0 0 6444 623918.4375 0.2189489803241254 -10 0.3469085693359375 2 Unmodified _DAVRIKTSI_ ENSG00000197658|ENST00000612278|SLC22A24;nc|ENSG00000197658|Q8N4F4-3|SLC22A24 27.22323531849824 0.1848086127304535 4 {[DA]|[EG]}{I|L}[RV]TKTV 9 4 + 35.601 0.0 0.0 3.5544 3.5544 65.535 0.0 0.0 0.0 7.007046801327739 2.735097166722156 2.735097166722156 1.6334835803019132 0 0.2742275032520141 1.5228787452803376 0.3807196863200844 0.0 {[DA]|[EG]}{I|L}[RV]TKTV;{[DA]|[EG]}V[R{I|L}]TKTV 3.5544;3.3913 -;- 204 + 1 2.264 69948.4 1.0 2188 4256 6444 HBL1_DMSO_200M_050219_2,6446 HBL1_DMSO_200M_050219_2,6446,DAVRIKTSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6447 34.08 800.0 163720.0 25 0 38552.0 17984 KRQQHQEE 8 108 541.7727793892047 1081.5310058452094 2 541.7727538943291 MULTI CID FTMS 0 0 0 6444 86501.25 0.1281467251392464 -11 0.4466514587402344 3 Unmodified _KRQQHQEE_ ENSG00000160818|ENST00000368232|GPATCH4;nc|ENSG00000160818|Q5T3I0-3|GPATCH4 11.640296217721598 0.738950129755968 4 SEE 3 6 25.93 0.0 0.0 2.3975 0.0 0.0 718.37602431465 0.0 718.37602431465 0.0 8.711375162600703 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SEE 2.3975 - 88 1 2.264 105874.9 0.4900000095367431 2189 4256 6444 HBL1_DMSO_200M_050219_2,6447 HBL1_DMSO_200M_050219_2,6447,KRQQHQEE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6449 34.085 101.0 703340.0 25 0 100870.0 + -1 YYQLMDLL 8 68 537.7644097733747 1073.5142666135494 2 537.7645141482353 MULTI CID FTMS 0 0 0 6448 622705.6875 0.8856887702513272 3 -0.0242424011230468 1 Oxidation (M) _YYQLM(Oxidation (M))DLL_ REV__ENSG00000172594|ENST00000368440|SMPDL3A;REV__nc|ENSG00000172594|Q92484-2|SMPDL3A 42.09456458481378 0.1992492688217789 4 YYQSGT 6 -1 78.549 0.0 0.0 7.317 0.0 0.0 0.0 371.20469080142817 371.20469080142817 67.7524439246897 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.8494850021680094 0.3807196863200844 YYQSGT 7.317 - 130 + 1 2.264 61722.9 1.0 2190 4257 6448 HBL1_DMSO_200M_050219_2,6449 HBL1_DMSO_200M_050219_2,6449,YYQLMDLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6450 34.093 490.0 230410.0 25 0 34054.0 + 24798 MPILTMKEP 9 111 530.2841969818508 1058.5538410305014 2 530.2843505740166 MULTI CID FTMS 0 0 0 6448 170276.140625 0.5716229722328091 8 -0.1401863098144531 2 Unmodified _MPILTMKEP_ REV__ENSG00000143552|ENST00000368559|NUP210L;REV__nc|ENSG00000143552|Q5VU65-2|NUP210L 25.399314129420983 0.2080152500878129 4 MP{I|L}QQSRTV 9 -1 + 78.414 0.0 0.0 7.4077 7.4077 90.545 0.0 0.0 0.0 54.23306927924408 0.8019813526458108 0.8019813526458108 9.208187539523747 0 1.1307196863200843 1.6989700043360187 0.3807196863200844 0.6747425010840047 MP{I|L}QQSRTV;MP{I|L}Q[AG]SRTV;MP{I|L}[AG]QSRTV;MP{I|L}QQ[KP]A{M(Oxidation (M))|F};MP{I|L}[AG][AG]SRTV;MP{I|L}Q[AG][KP]A{M(Oxidation (M))|F};MP{I|L}[AG]Q[KP]A{M(Oxidation (M))|F};[{I|L}P]M[{M(Oxidation (M))|F}V][EP]{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[{M(Oxidation (M))|F}V][EP]{[QV]|[N{I|L}]|[RA]|[KV]} 7.4077;6.5378;6.5378;6.4713;5.672;5.6014;5.6014;2.207;1.1671 -;-;-;-;-;-;-;-;- 258 + 1 2.264 91741.2 1.0 2191 4257 6448 HBL1_DMSO_200M_050219_2,6450 HBL1_DMSO_200M_050219_2,6450,MPILTMKEP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6452 34.1 238.0 228300.0 25 0 33994.0 -1 ENQQMMKR 8 97 548.7495680735832 1095.4845832139663 2 548.7496826052666 MULTI CID FTMS 0 0 0 6451 187987.859375 0.7340394974384442 3 -0.0146865844726562 1 2 Oxidation (M) _ENQQM(Oxidation (M))M(Oxidation (M))KR_ ENSG00000101350|ENST00000375712|KIF3B;nc|ENSG00000101350|O15066-2|KIF3B 15.847184025352805 0.6768015514314958 4 EQNE 4 -1 34.399 0.0 0.0 3.1401 0.0 0.0 356.2100752057415 236.06781946353752 592.277894669279 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6307196863200843 1.1549471895720984 EQNE 3.1401 - 520 + 1 2.264 48429.3 1.0 2192 4258 6451 HBL1_DMSO_200M_050219_2,6452 HBL1_DMSO_200M_050219_2,6452,ENQQMMKR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6456 34.126 800.0 138480.0 25 0 9069.1 -1 MPPPPPQGV 9 120 468.236188042907 934.457823152614 2 468.2372009158134 MULTI CID FTMS 0 0 0 6455 111364.5625 0.0641590697776914 64 -1.7858810424804688 1 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 24.67388899826682 0.2172451872415813 4 V 1 -1 18.979 0.0 0.0 2.0311 0.0 0.0 817.3784754737062 0.0 817.3784754737062 0.0 5.706487313221293 0.0 0.0 0 0.5 0.0 0.0 0.0 V 2.0311 + + 226 + 1 2.268 89732.6 0.6100000143051147 2193 4261 6455 HBL1_DMSO_200M_050219_2,6456 HBL1_DMSO_200M_050219_2,6456,MPPPPPQGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6457 34.128 148.0 474550.0 25 0 81190.0 -1 STVDLSCYS 9 93 516.2223508229558 1030.4301487127116 2 516.2233764529228 MULTI CID FTMS 0 0 0 6455 135555.875 0.2792180611033386 -7 0.114959716796875 2 Carbamidomethyl (C) _STVDLSC(Carbamidomethyl (C))YS_ ENSG00000040199|ENST00000568954|PHLPP2;ENST00000538126.5_1_16:71712656-71757677:-|nuORF;nc|ENSG00000040199|Q6ZVD8-2|PHLPP2;nc|ENSG00000040199|Q6ZVD8-3|PHLPP2 16.942295170755138 0.3780752226737986 4 P 1 -1 11.783 0.0 0.0 1.1435 0.0 0.0 915.366258187124 0.0 915.366258187124 0.0 0.5236767526000641 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.1435 - 71 + 1 2.268 58915.8 1.0 2194 4261 6455 HBL1_DMSO_200M_050219_2,6457 HBL1_DMSO_200M_050219_2,6457,STVDLSCYS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6459 34.133 27.0 1715700.0 25 0 217320.0 + 4256 DAPRVGDEV 9 65 479.2355082368232 956.4564635404464 2 479.2353698611259 MULTI CID FTMS 0 0 0 6458 2099934.75 0.9265729864915802 3 -0.0915298461914062 1 Unmodified _DAPRVGDEV_ ENSG00000162783|ENST00000367577|IER5 19.361941925380144 0.3125782356748823 4 {[DA]|[EG]}[RP][VG]DEV 9 0 + 48.931 0.0 0.0 5.1158 5.1158 52.994 0.0 0.0 0.0 13.18513709057612 46.71204671777453 13.18513709057612 0.0 0 0.8807196863200843 2.0 0.0 0.0 + + {[DA]|[EG]}[RP][VG]DEV;{[DA]|[EG]}[RP][DV]GEV;{NN|[MP]|[D{I|L}]|[EV]}[NP]RDEV;[RP]{[DA]|[EG]}[DV]GEV;[RP]{[DA]|[EG]}[VG]DEV 5.1158;5.1158;3.4704;2.3179;2.3179 +;-;-;-;- + 75 1 2.268 43562.1 1.0 2195 4262 6458 HBL1_DMSO_200M_050219_2,6459 HBL1_DMSO_200M_050219_2,6459,DAPRVGDEV False True DAPRVGDEV 34.133216 479.235369861126 32315526.0 6458.0 ENSG00000162783|ENST00000367577|IER5 2.625359217325846 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6460 34.136 114.0 522110.0 25 0 76141.0 + 32620 SAYEQVKQV 9 88 526.2746094703621 1050.534666007524 2 526.2746459841728 MULTI CID FTMS 0 0 0 6458 584003.125 0.7602098962136803 5 -0.1390724182128906 2 Unmodified _SAYEQVKQV_ ENSG00000054282|ENST00000366541|SDCCAG8;nc|ENSG00000054282|Q86SQ7-2|SDCCAG8;nc|ENSG00000054282|Q86SQ7-3|SDCCAG8;nc|ENSG00000054282|Q86SQ7-4|SDCCAG8 89.40071534611396 0.0152361884002446 4 {[SA]|[TG]}YEQVKQV 9 0 + 96.252 0.0 0.0 9.1622 9.1622 93.455 0.0 0.0 0.0 46.99600975727897 19.436974992327123 19.436974992327123 9.208187539523747 0 1.9291746928241125 1.6989700043360187 0.4247425010840047 1.6549471895720984 + + {[SA]|[TG]}YEQVKQV;{[SA]|[TG]}YE[AG]VKQV;{[SA]|[TG]}YEQVK[AG]V;{[SA]|[TG]}YE[AG]VK[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}KQV{M(Oxidation (M))|F}G{M(Oxidation (M))|F}V;{[QV]|[N{I|L}]|[RA]|[KV]}K[AG]V{M(Oxidation (M))|F}G{M(Oxidation (M))|F}V;{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}{I|L}{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}KQEY{[SA]|[TG]}V;[YE]QV[KQ]{[SA]|[TG]}V;{[QV]|[N{I|L}]|[RA]|[KV]}EY[KQ]{[SA]|[TG]}V 9.1622;8.2857;7.8813;7.009;4.8853;4.0087;3.6116;3.2504;2.7803;2.7589 +;-;-;-;-;-;-;-;-;- + 619 + 1 2.268 51490.8 1.0 2196 4262 6458 HBL1_DMSO_200M_050219_2,6460 HBL1_DMSO_200M_050219_2,6460,SAYEQVKQV True True SAYEQVKQV 34.135622 526.274645984173 11310005.0 6458.0 nc|ENSG00000054282|Q86SQ7-3|SDCCAG8;;ENSG00000054282|ENST00000366541|SDCCAG8;;nc|ENSG00000054282|Q86SQ7-2|SDCCAG8;;nc|ENSG00000054282|Q86SQ7-4|SDCCAG8 7.229146798451741 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6461 34.149 800.0 256280.0 25 0 13490.0 -1 0 208 331.68943769990926 0 331.6895019412041 PEAK CID FTMS 0 0 0 6458 114068.484375 1.0 0 0.0 3 4 Y 1 -1 7.302 0.0 0.0 1.1041 0.0 0.0 330.22209331798416 165.05593286685783 495.278026184842 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 Y 1.1041 - 49 + 1 2.268 159731.1 0.959999978542328 2197 4262 6458 HBL1_DMSO_200M_050219_2,6461 HBL1_DMSO_200M_050219_2,6461, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6462 34.163 800.0 214790.0 25 0 27625.0 + 44828 YPNPYSKHV 9 159 368.8547555163086 1103.5424371491258 3 368.8538696169853 MULTI CID FTMS 0 0 0 6458 113642.0546875 0.4624950956296575 -8 0.1355667114257812 4 Unmodified _YPNPYSKHV_ ENSG00000169230|ENST00000303204|PRELID1;ENST00000511309.5_1_5:176730986-176733129:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1 38.17557092003332 0.0854718145212029 4 YPNPY[KS]HV 9 0 + 60.07 0.0 0.0 5.4434 5.4434 70.866 0.0 0.0 0.0 28.69666231504993 0.6069784035361181 0.6069784035361181 0.6069784035361181 0 0.5010912013506126 1.2218487496163564 0.4247425010840047 0.0 + + YPNPY[KS]HV;YPNPY[KS]VH;YPGGPY[KS]HV;YPGGPY[KS]VH;YPNV[YV]NHV;YPNV[YV]NVH;YPGGV[YV]NHV;YPNV[YV]GGHV;YPGGV[YV]NVH;YPNV[YV]GGVH 5.4434;5.3884;4.609;4.554;4.1165;4.0615;3.2821;3.2821;3.2271;3.2271 +;-;-;-;-;-;-;-;-;- + 427 + 1 2.268 141858.4 0.4300000071525574 2198 4262 6458 HBL1_DMSO_200M_050219_2,6462 HBL1_DMSO_200M_050219_2,6462,YPNPYSKHV True True YPNPYSKHV 34.163251 368.853869616985 8269803.5 6458.0 ENST00000511309.5_1_5:176730986-176733129:+|nuORF;;ENSG00000169230|ENST00000303204|PRELID1;;nc|ENSG00000169230|Q9Y255-2|PRELID1 7.059518814086914 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6464 34.168 34.0 1738900.0 25 0 175660.0 + 45061 YPYGDGNRSV 10 63 564.2594949785671 1126.504437023934 2 564.2596923708916 MULTI CID FTMS 0 0 0 6463 1622049.0 0.32349779501629 11 -0.3243446350097656 1 Unmodified _YPYGDGNRSV_ ENSG00000156735|ENST00000287322|BAG4;ENST00000531211.1_1_8:70772071-70772629:-|nuORF;nc|ENSG00000156735|O95429-2|BAG4 18.373094154950223 0.5392593366289069 4 YPYGD 5 5 67.206 0.0 0.0 5.9659 0.0 0.0 0.0 528.2528742953838 528.2528742953838 60.21652514092061 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + YPYGD 5.9659 + + 70 + 1 2.268 51612.4 1.0 2199 4263 6463 HBL1_DMSO_200M_050219_2,6464 HBL1_DMSO_200M_050219_2,6464,YPYGDGNRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6465 34.171 126.0 524040.0 25 0 114590.0 + 5062 DGYEQAARV 9 81 504.7409398526873 1007.4673267721746 2 504.7409850955009 MULTI CID FTMS 0 0 0 6463 421826.21875 0.0014463334166037 26 -0.7625846862792969 2 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 45.69961567697781 0.0497987121815769 4 [DG]YEQAA[RV] 9 0 + 65.886 0.0 0.0 6.5397 6.5397 87.738 0.0 0.0 0.0 56.15385795954465 4.762036441594191 4.762036441594191 9.208187539523747 0 0.9749073637206092 1.0969100130080565 0.4247425010840047 0.3807196863200844 + + [DG]YEQAA[RV];[DG]YE[AG]AA[RV];[DG]YEV[NG][RV];[DG]YV[DN]A[RV];[DG]YVE[NG][RV] 6.5397;5.6258;4.3798;4.1456;3.548 +;-;-;-;- + 123 + 1 2.268 55578.7 1.0 2200 4263 6463 HBL1_DMSO_200M_050219_2,6465 HBL1_DMSO_200M_050219_2,6465,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6466 34.175 261.0 286570.0 25 0 27697.0 -1 0 101 442.2326744878114 441.22539802121145 1 442.2319518923759 MULTI CID FTMS 0 0 0 6463 120277.3515625 0.7573386407131217 -2 0.0554351806640625 3 4 TAA 3 -1 19.57 0.0 0.0 4.4354 0.0 0.0 180.09004409004064 0.0 180.09004409004064 0.0 4.4323428421059 0.0 0.0 0 0.2742275032520141 0.0 0.3807196863200844 0.0 TAA 4.4354 - 38 1 2.268 63235.4 1.0 2201 4263 6463 HBL1_DMSO_200M_050219_2,6466 HBL1_DMSO_200M_050219_2,6466, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6467 34.185 559.0 187750.0 25 0 9605.0 + 12122 GQIRNLESA 9 138 494.2631608080079 986.5117686828158 2 494.2642089724541 MULTI CID FTMS 0 0 0 6463 106068.2109375 0.7534213454039999 -2 0.0554351806640625 4 Unmodified _GQIRNLESA_ ENSG00000214517|ENST00000328257|PPME1;nc|ENSG00000214517|Q9Y570-2|PPME1;nc|ENSG00000214517|Q9Y570-4|PPME1 26.268140514670165 0.1969607489560049 4 {[SA]|[TG]}[{I|L}V][TP]{I|L}ESA 10 4 {[SA]|[TG]}[{I|L}V][TP]{I|L}E + + 18.469 -11.35 -1.4005 1.8722 1.8722 44.497 0.0 0.0 0.0 0.0 1.5578750293529673 0.0 0.0 0 0.5 0.0 0.25 0.0 {[SA]|[TG]}[{I|L}V][TP]{I|L}ESA 1.8722 - 353 + 1 2.268 84400.5 1.0 2202 4263 6463 HBL1_DMSO_200M_050219_2,6467 HBL1_DMSO_200M_050219_2,6467,GQIRNLESA False True GQIRNLESA 34.185245 494.264208972454 728083.875 6463.0 ENSG00000214517|ENST00000328257|PPME1;;nc|ENSG00000214517|Q9Y570-4|PPME1;;nc|ENSG00000214517|Q9Y570-2|PPME1 3.973389546076457 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6468 34.199 800.0 53027.0 25 0 4124.3 -1 0 56 874.6423308306893 4368.175271820446 5 875.4456054568291 MULTI CID FTMS 0 0 0 6463 68396.5 0.8767057441825346 -4 0.0631866455078125 5 4 {I|L}AE 3 -1 12.778 0.0 0.0 0.29253 0.0 0.0 3497.743339302672 554.2580050104124 4052.001344313084 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8252574989159953 0.0 {I|L}AE 0.29253 - 81 + 1 2.268 41537.7 0.4000000059604645 2203 4263 6463 HBL1_DMSO_200M_050219_2,6468 HBL1_DMSO_200M_050219_2,6468, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6470 34.207 297.0 234390.0 25 0 48098.0 + 43722 YDDEDYDSH 9 92 579.6967610454224 1157.3789691576446 2 579.6970703005791 MULTI CID FTMS 0 0 0 6469 359952.40625 0.1522259942491142 14 -0.4304351806640625 1 Unmodified _YDDEDYDSH_ REV__ENSG00000122728|ENST00000242310|TAF1L;REV__ENSG00000147133|ENST00000423759|TAF1;REV__nc|ENSG00000147133|P21675-1|TAF1;REV__nc|ENSG00000147133|P21675-13|TAF1;REV__nc|ENSG00000147133|P21675-15|TAF1;REV__nc|ENSG00000147133|P21675-16|TAF1;REV__nc|ENSG00000147133|P21675-17|TAF1;REV__nc|ENSG00000147133|P21675-18|TAF1;REV__nc|ENSG00000147133|P21675-19|TAF1;REV__nc|ENSG00000147133|P21675-20|TAF1;REV__nc|ENSG00000147133|P21675-21|TAF1;REV__nc|ENSG00000147133|P21675-22|TAF1;REV__nc|ENSG00000147133|P21675-23|TAF1;REV__nc|ENSG00000147133|P21675-24|TAF1;REV__nc|ENSG00000147133|P21675-25|TAF1;REV__nc|ENSG00000147133|P21675|TAF1 11.640296217721598 0.521594087909532 4 QDYYY 5 -1 27.976 0.0 0.0 2.4172 0.0 0.0 407.0928822248063 0.0 407.0928822248063 0.0 8.46787486224656 0.0 0.0 0 0.3182503180159344 0.0 0.0 1.424742501084005 QDYYY 2.4172 - 149 1 2.268 60057.7 1.0 2204 4264 6469 HBL1_DMSO_200M_050219_2,6470 HBL1_DMSO_200M_050219_2,6470,YDDEDYDSH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6471 34.212 279.0 542070.0 25 0 93600.0 + 40039 VGGALMRK 8 115 416.2481825103727 0 416.2487975955009 PEAK CID FTMS 0 0 0 6469 165473.921875 0.9640735870117948 -2 0.0704612731933593 2 Unmodified _VGGALMRK_ REV__ENSG00000169783|ENST00000355300|LINGO1 10.183394434864962 0.5394990767616434 4 E 1 -1 6.9897 0.0 0.0 0.84164 0.0 0.0 146.1152854345699 552.3007674324773 698.4160528670473 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.84164 - 30 + 1 2.268 121826.3 1.0 2205 4264 6469 HBL1_DMSO_200M_050219_2,6471 HBL1_DMSO_200M_050219_2,6471,VGGALMRK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6472 34.22 456.0 211250.0 25 0 23934.0 + 42137 VRTYSEKV 8 104 491.2717781268404 980.5290033204808 2 491.2712280154228 MULTI CID FTMS 0 0 0 6469 164221.984375 0.8051220226105372 5 -0.154876708984375 3 Unmodified _VRTYSEKV_ ENSG00000152939|ENST00000325631|MARVELD2;nc|ENSG00000152939|Q8N4S9-2|MARVELD2;nc|ENSG00000152939|Q8N4S9-3|MARVELD2 26.88365393820708 0.4786498634179528 4 V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D[{M(Oxidation (M))|F}V]KV 8 5 + 33.452 0.0 0.0 3.4117 3.4117 79.536 0.0 0.0 0.0 9.802046884880935 15.59944018472553 9.802046884880935 20.133418048066783 0 0.6307196863200843 0.0 0.0 0.7302046884880937 V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D[{M(Oxidation (M))|F}V]KV;V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[R{M(Oxidation (M))|F}]WV;V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RP]M{[CT]|[{M(Oxidation (M))|F}G]} 3.4117;1.3583;0.77714 -;-;- 178 + 1 2.268 76699.0 1.0 2206 4264 6469 HBL1_DMSO_200M_050219_2,6472 HBL1_DMSO_200M_050219_2,6472,VRTYSEKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6474 34.225 19.0 3012400.0 25 0 447030.0 + 18335 KVLERVNAV 9 65 514.3164768621723 1026.6184007911445 2 514.3167602419853 MULTI CID FTMS 0 0 0 6473 3384672.25 0.9677080160786604 1 -0.0111732482910156 1 Unmodified _KVLERVNAV_ ENSG00000100911|ENST00000216802|PSME2;ENST00000442824.1_1_5:97549420-97549822:+|nuORF;ENST00000453033.1_1_13:49345602-49345743:+|nuORF;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;ENST00000559359.1_1_14:24613399-24613677:-|nuORF 17.11289562659939 0.3734572693229295 4 KV{I|L}E 4 5 41.186 0.0 0.0 4.0118 0.0 0.0 0.0 554.3050020807249 554.3050020807249 29.76564198917517 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + KV{I|L}E 4.0118 + + 27 + 1 2.268 48985.2 1.0 2207 4265 6473 HBL1_DMSO_200M_050219_2,6474 HBL1_DMSO_200M_050219_2,6474,KVLERVNAV False True KVLERVNAV 34.224744 514.316760241985 50347144.0 6473.0 ENSG00000100911|ENST00000216802|PSME2;;ENST00000442824.1_1_5:97549420-97549822:+|nuORF;;ENST00000471700.6_1_14:24612807-24615772:-|nuORF;;ENST00000559359.1_1_14:24613399-24613677:-|nuORF;;ENST00000453033.1_1_13:49345602-49345743:+|nuORF 4.559551239013672 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6475 34.23 280.0 387800.0 25 0 82824.0 + 4250 DAPPSRVSV 9 89 464.2485375819246 926.4825222306492 2 464.2483398318291 MULTI CID FTMS 0 0 0 6473 350142.59375 0.2191939755907963 23 -0.7001266479492188 2 Unmodified _DAPPSRVSV_ ENSG00000180900|ENST00000356994|SCRIB;nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB 12.240655878213236 0.5053430591993562 4 {[DA]|[EG]}PP 4 5 38.94 0.0 0.0 4.203 0.0 0.0 0.0 543.2902315729124 543.2902315729124 26.72167511924052 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[DA]|[EG]}PP 4.203 + + 35 + 1 2.268 87348.1 1.0 2208 4265 6473 HBL1_DMSO_200M_050219_2,6475 HBL1_DMSO_200M_050219_2,6475,DAPPSRVSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6476 34.231 58.0 915490.0 25 0 116350.0 + 27659 PLHHRLRV 8 78 343.213648407306 1026.619115822118 3 343.2132751345634 MULTI CID FTMS 0 0 0 6473 635571.9375 0.8638025554551052 3 -0.0967292785644531 3 Unmodified _PLHHRLRV_ REV__ENST00000536474.1_1_12:110173555-110173708:-|nuORF 10.183394434864962 0.7604730176254005 4 [{I|L}P][KC]RR[RV] 8 -1 + 17.905 0.0 0.0 1.7441 1.7441 76.735 0.0 0.0 0.0 4.409999832893593 -12.730012720637372 -12.730012720637372 17.904849854573687 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P][KC]RR[RV] 1.7441 - 68 1 2.268 51125.4 1.0 2209 4265 6473 HBL1_DMSO_200M_050219_2,6476 HBL1_DMSO_200M_050219_2,6476,PLHHRLRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6478 34.244 599.0 187450.0 25 0 17574.0 + 41134 VPADASAHI 9 118 440.7300241621157 879.4454953910315 2 440.7299377322197 MULTI CID FTMS 0 0 0 6477 155831.546875 0.716039059133993 -4 0.1027030944824218 1 Unmodified _VPADASAHI_ ENSG00000135912|ENST00000392102|TTLL4 42.09456458481378 0.0639583784996157 4 VPADASAH{I|L} 9 0 + 73.158 0.0 0.0 8.3187 8.3187 85.937 0.0 0.0 0.0 36.47817481888637 3.881801713828821 3.881801713828821 3.881801713828821 0 0.3807196863200844 2.0 0.0 0.0 + + VPADASAH{I|L};VPADASA{I|L}H;VPAD[QT]H{I|L};VPADWP[VP];VPWWRH;VPAD[QT]{I|L}H;VP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QRH;VPA[TA][DG]H{I|L};VP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QP[VP];VPA[TA][DG]{I|L}H 8.3187;7.8773;6.7532;6.3589;6.3118;6.3118;5.638;5.584;5.3087;5.1426 +;-;-;-;-;-;-;-;-;- + 570 + 1 2.268 90206.8 1.0 2210 4266 6477 HBL1_DMSO_200M_050219_2,6478 HBL1_DMSO_200M_050219_2,6478,VPADASAHI True True VPADASAHI 34.244134 440.72993773222 3821767.5 6477.0 ENSG00000135912|ENST00000392102|TTLL4 6.0549899737040205 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6479 34.247 151.0 405390.0 25 0 76189.0 34104 SLLNDAVTV 9 85 466.258732264515 930.50291159583 2 466.2587158083916 MULTI CID FTMS 0 0 0 6477 331103.90625 0.6767678812941474 9 -0.310699462890625 2 Unmodified _SLLNDAVTV_ ENSG00000066230|ENST00000264938|SLC9A3;ENSG00000090020|ENST00000263980|SLC9A1;ENSG00000115616|ENST00000233969|SLC9A2;ENSG00000135740|ENST00000299798|SLC9A5;ENST00000564704.5_1_16:67272241-67289541:+|nuORF;ENST00000564812.5_1_16:67286693-67289803:+|nuORF;nc|ENSG00000066230|P48764-2|SLC9A3;nc|ENSG00000090020|P19634-2|SLC9A1 21.53697664764585 0.2571576504437394 4 {[TV]|[{I|L}S]}QVDA 6 5 48.633 0.0 0.0 5.2265 0.0 0.0 0.0 314.1733577230363 314.1733577230363 23.438718088259805 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}QVDA 5.2265 - 305 1 2.268 52478.5 1.0 2211 4266 6477 HBL1_DMSO_200M_050219_2,6479 HBL1_DMSO_200M_050219_2,6479,SLLNDAVTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6480 34.254 377.0 226780.0 25 0 12473.0 + 25637 NFQTADKY 8 132 493.73281650983 985.45108008646 2 493.7325012087822 MULTI CID FTMS 0 0 0 6477 167474.40625 1.0 0 0.0 3 Unmodified _NFQTADKY_ ENSG00000197943|ENST00000564138|PLCG2 58.6788170122104 0.1149141431586871 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QTADKY 8 0 + 39.162 0.0 0.0 3.974 3.974 78.269 0.0 0.0 0.0 22.339190936484027 11.524174299985006 11.524174299985006 9.262137858390812 0 0.7059771852360797 0.0 0.6747425010840047 0.5 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QTADKY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[AG]TADKY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Q[KA]{[ES]|[DT]|[{I|L}C]}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Q{[YD]|[{M(Oxidation (M))|F}M]}[KT]A;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Q[YC(Carbamidomethyl (C))]RV;{[QD]|[EN]|[WG]|[KD]|[RS]}[H{I|L}]{[QC]|[C(Carbamidomethyl (C))A]}SR;{[QD]|[EN]|[WG]|[KD]|[RS]}{[HG]|PP}{[WT]|[RM]}SR;{[DA]|[EG]}T[YK]Q{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[AG][YC(Carbamidomethyl (C))]RV;[AG]PAQ[PG]E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.974;3.0341;1.4887;1.1153;1.0736;0.43241;0.43241;0.25015;0.12673;0.062445 +;-;-;-;-;-;-;-;-;- + 508 + 1 2.268 69019.2 1.0 2212 4266 6477 HBL1_DMSO_200M_050219_2,6480 HBL1_DMSO_200M_050219_2,6480,NFQTADKY True True NFQTADKY 34.253903 493.732501208782 906104.5625 6477.0 ENSG00000197943|ENST00000564138|PLCG2 6.486993312835693 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6481 34.268 800.0 205110.0 25 0 24822.0 + 45827 YYPDGHNDY 9 122 572.222428975292 1142.430305017384 2 572.2223998904228 MULTI CID FTMS 0 0 0 6477 152116.546875 0.912904741873468 14 -0.44512939453125 4 Unmodified _YYPDGHNDY_ ENSG00000141380|ENST00000415083|SS18 22.736283301280096 0.2418982879461534 4 YYPDE{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 8 4 + 49.421 0.0 0.0 4.3259 4.3259 76.928 0.0 0.0 0.0 25.088892031443944 8.548888535387185 8.548888535387185 7.971062485323522 0 0.3252574989159953 2.0 0.3807196863200844 0.0 YYPDE{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y;YYPTY[C(Carbamidomethyl (C))N]Y;YYPDEMNDP;YYPT[KC]CCY;YYY[TP][C(Carbamidomethyl (C))N]Y;YYPDG[WM]DP;YYPDDY[NG]H;YYYM[YE]DP;{[HG]|PP}[DP]NDYYY;YY[QA]{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}Y 4.3259;3.6282;3.56;3.1903;2.7574;2.6261;2.4676;2.24;2.2396;2.0963 -;-;-;-;-;-;-;-;-;- 408 + 1 2.268 124060.2 0.6399999856948853 2213 4266 6477 HBL1_DMSO_200M_050219_2,6481 HBL1_DMSO_200M_050219_2,6481,YYPDGHNDY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6483 34.272 12.0 4863700.0 25 0 267890.0 + 3831 DAIRVTKTV 9 76 501.8010450827645 1001.587537232329 2 501.8008911013603 MULTI CID FTMS 0 0 0 6482 5156374.5 1.0 0 0.0 1 Unmodified _DAIRVTKTV_ ENSG00000120008|ENST00000263461|WDR11 37.77132515983256 0.0876909340306915 4 {[DA]|[EG]}[R{I|L}]VTKTV 9 0 + 61.098 0.0 0.0 6.1001 6.1001 87.741 0.0 0.0 0.0 9.973024840566469 29.684334470932043 9.973024840566469 11.32068444291761 0 1.1237125054200234 1.3979400086720375 0.6549471895720984 0.0 + + {[DA]|[EG]}[R{I|L}]VTKTV;{[TV]|[{I|L}S]}[RK]{I|L}ADTV;[{I|L}A][RD]VTKTV;[KT][RV]{I|L}ADTV 6.1001;4.9698;4.0926;3.4493 +;-;-;- + 237 1 2.268 48738.0 1.0 2214 4267 6482 HBL1_DMSO_200M_050219_2,6483 HBL1_DMSO_200M_050219_2,6483,DAIRVTKTV True True DAIRVTKTV 34.27229 501.80089110136 80437730.0 6482.0 ENSG00000120008|ENST00000263461|WDR11 4.423139890034993 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6484 34.276 170.0 427150.0 25 0 67372.0 + 41660 VPPYHAVLT 9 78 498.77759939018216 995.5406458471645 2 498.7776061892509 MULTI CID FTMS 0 0 0 6482 370347.6875 0.5193304017543899 25 -0.6881446838378906 2 Unmodified _VPPYHAVLT_ REV__chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;REV__chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;REV__ENSG00000116062|ENST00000234420|MSH6;REV__nc|ENSG00000116062|P52701-2|MSH6;REV__nc|ENSG00000116062|P52701-3|MSH6;REV__nc|ENSG00000116062|P52701-4|MSH6 16.942295170755138 0.3780752226737986 4 VPPD 4 -1 59.993 0.0 0.0 6.0262 0.0 0.0 0.0 584.3168512554394 584.3168512554394 45.56433626008975 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 VPPD 6.0262 - 60 + 1 2.268 60111.1 1.0 2215 4267 6482 HBL1_DMSO_200M_050219_2,6484 HBL1_DMSO_200M_050219_2,6484,VPPYHAVLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6485 34.28 259.0 346940.0 25 0 24507.0 -1 0 94 620.3133180947808 619.3060416281808 1 620.3137084841728 MULTI CID FTMS 0 0 0 6482 396603.75 0.8439514525028438 -8 0.1674308776855468 3 4 PP[QP]N 5 -1 32.408 0.0 0.0 5.2329 0.0 0.0 68.03486463807083 0.0 68.03486463807083 0.0 17.179001828205486 0.0 0.0 0 0.0 0.0 0.0 1.0189301784845295 PP[QP]N 5.2329 - 299 + 1 2.268 71564.3 1.0 2216 4267 6482 HBL1_DMSO_200M_050219_2,6485 HBL1_DMSO_200M_050219_2,6485, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6486 34.286 326.0 294470.0 25 0 42484.0 + 21865 LPPEQRQSI 9 98 534.2951098195646 1066.575666705929 2 534.2942993044853 MULTI CID FTMS 0 0 0 6482 232603.9375 0.1772222332804348 31 -0.8008308410644531 4 Unmodified _LPPEQRQSI_ ENSG00000101811|ENST00000372972|CSTF2;ENSG00000177613|ENST00000331173|CSTF2T;nc|ENSG00000101811|P33240-2|CSTF2 21.53697664764585 0.2571576504437394 4 {I|L}PPE 4 5 59.68 0.0 0.0 5.5955 0.0 0.0 0.0 627.3208101861936 627.3208101861936 49.84759407011602 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 + {I|L}PPE 5.5955 + + 41 + 1 2.268 82440.8 1.0 2217 4267 6482 HBL1_DMSO_200M_050219_2,6486 HBL1_DMSO_200M_050219_2,6486,LPPEQRQSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6487 34.294 419.0 300100.0 25 0 135290.0 -1 0 86 407.1889153940869 406.1816389274869 1 407.1887695193291 MULTI CID FTMS 0 0 0 6482 224709.796875 0.3948046394111219 4 -0.1323204040527343 5 4 [YQ]P 3 -1 [YQ] + + 16.99 -0.16712 -0.057406 4.1828 4.1828 49.305 0.0 0.0 0.0 0.0 7.156818820794939 0.0 0.0 0 0.0 0.0 0.0 0.0 [YQ]P 4.1828 - 20 + 1 2.268 104843.7 1.0 2218 4267 6482 HBL1_DMSO_200M_050219_2,6487 HBL1_DMSO_200M_050219_2,6487, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6488 34.308 800.0 183640.0 25 0 44968.0 -1 0 47 1108.8053983926002 3323.394365778001 3 1109.139453113079 MULTI CID FTMS 0 0 0 6482 197689.75 0.2116908222130548 -7 0.1634864807128906 6 4 GYW 3 -1 13.188 0.0 0.0 0.39681 0.0 0.0 1944.678771320998 969.5374185438488 2914.216189864847 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYW 0.39681 - 33 + 1 2.268 126462.9 0.550000011920929 2219 4267 6482 HBL1_DMSO_200M_050219_2,6488 HBL1_DMSO_200M_050219_2,6488, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6489 34.317 517.0 372090.0 25 0 70410.0 + 6130 DSYPRNPTV 9 142 524.7565015837678 1047.4984502343357 2 524.7568237185478 MULTI CID FTMS 0 0 0 6482 155307.390625 0.0221633197139341 -8 0.1674308776855468 7 Unmodified _DSYPRNPTV_ ENSG00000057252|ENST00000367619|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;nc|ENSG00000057252|P35610-3|SOAT1 61.60191391372663 0.0251951588191061 4 {[DS]|[MA]|[CV]|TT}YPRNPTV 9 0 {[DS]|[MA]|[CV]|TT} + + 28.708 6.4659 3.2 2.7406 2.7406 45.452 0.0 0.0 0.0 0.0 17.09183145787911 0.0 0.0 0 1.492992819099939 0.0 0.6109243748081782 0.0 + + {[DS]|[MA]|[CV]|TT}YPRNPTV 2.7406 + + 630 + 1 2.268 154438.6 1.0 2220 4267 6482 HBL1_DMSO_200M_050219_2,6489 HBL1_DMSO_200M_050219_2,6489,DSYPRNPTV True True DSYPRNPTV 34.316773 524.756823718548 120186156.0 6482.0 nc|ENSG00000057252|P35610-2|SOAT1;;ENSG00000057252|ENST00000367619|SOAT1;;nc|ENSG00000057252|P35610-3|SOAT1 7.471131165822347 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6491 34.322 29.0 2624100.0 25 0 331610.0 + 36246 SYAPRRGEF 9 67 361.5175220489346 1081.530736747004 3 361.5173217654228 MULTI CID FTMS 0 0 0 6490 1816719.25 0.931360265271068 1 -0.037078857421875 1 Unmodified _SYAPRRGEF_ ENSG00000197157|ENST00000354725|SND1 24.020572477871973 0.2255576514309169 4 SY{M(Oxidation (M))|F} 3 6 49.45 0.0 0.0 4.5723 0.0 0.0 0.0 681.3438457292775 681.3438457292775 36.97621246364342 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 SY{M(Oxidation (M))|F} 4.5723 - 34 + 1 2.271 70629.0 1.0 2221 4268 6490 HBL1_DMSO_200M_050219_2,6491 HBL1_DMSO_200M_050219_2,6491,SYAPRRGEF False True SYAPRRGEF 34.321525 361.517321765423 26245080.0 6490.0 ENSG00000197157|ENST00000354725|SND1 8.046225547790527 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6492 34.335 800.0 147860.0 25 0 6839.8 + 43992 YIDHGDPQV 9 148 522.242856244889 1042.471159556578 2 522.2433959841728 MULTI CID FTMS 0 0 0 6490 54663.625 0.1146168836525628 18 -0.5199966430664062 2 Unmodified _YIDHGDPQV_ ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF 32.30548876998284 0.1201446275138228 4 {I|L}YPQV 5 5 28.136 0.0 0.0 2.699 0.0 0.0 424.1345997541032 0.0 424.1345997541032 0.0 17.858501203795907 0.0 0.0 0 0.5484550065040282 0.0 0.0 0.0 {I|L}YPQV 2.699 - 140 1 2.271 98245.9 0.6100000143051147 2222 4268 6490 HBL1_DMSO_200M_050219_2,6492 HBL1_DMSO_200M_050219_2,6492,YIDHGDPQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6493 34.34 252.0 325530.0 25 0 66094.0 + + -1 YPDGTVKTV 9 109 490.26072210857495 978.50689128395 2 490.2587463259697 MULTI CID FTMS 0 0 0 6490 143180.46875 0.2717293641896723 -6 0.1882591247558593 3 Oxidation (M) _M(Oxidation (M))LQTLASLS_ ENSG00000151849|ENST00000381884|CENPJ 36.12702656103203 0.0967173616627612 4 YPWWKTV 7 -1 + 74.359 0.0 0.0 7.5992 7.5992 95.683 0.0 0.0 0.0 28.928444568809688 12.094741946982772 12.094741946982772 33.60895145401999 0 1.048455006504028 1.6989700043360187 1.360924374808178 0.0 YPWWKTV;[DP]GTVKTVY;[DP]KEKTVY;[DP]GTVYK{[TV]|[{I|L}S]};[DP]KTRTVY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WWK{[TV]|[{I|L}S]};[DP]KEYK{[TV]|[{I|L}S]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RRQPY;{[MS]|[{M(Oxidation (M))|F}A]}Y[HN]KTV;[DP]GTVKY{[TV]|[{I|L}S]} 7.5992;4.1645;3.8443;3.295;3.2181;3.0336;2.9748;2.8811;2.7885;2.7592 -;-;-;-;-;-;-;-;-;- 514 + 1 2.271 67991.4 1.0 2223 4268 6490 HBL1_DMSO_200M_050219_2,6493 HBL1_DMSO_200M_050219_2,6493,MLQTLASLS False False YPDGTVKTV 34.340044 490.25874632597 6429561.0 6490.0 ENSG00000151849|ENST00000381884|CENPJ 5.533613999684651 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6494 34.354 800.0 190260.0 25 0 9448.9 + -1 AQYEDIAQKSKAEAE 15 139 560.9407321123621 1679.800366937286 3 560.9412109255791 MULTI CID FTMS 0 0 0 6490 119978.6015625 0.4387952841209037 -4 0.1177978515625 4 Acetyl (Protein N-term),2 Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))WRC(Carbamidomethyl (C))RRRC(Carbamidomethyl (C))RVS_ ENSG00000167768|ENST00000252244|KRT1 0.0 0.8751479354844584 4 [YE]D{I|L}{I|L}KQA{I|L}DEY 12 -1 90.531 0.0 0.0 5.3894 0.0 0.0 0.0 196.07077815987364 196.07077815987364 69.61303739409743 0.0 0.0 0.0 0 1.086696871556164 1.6989700043360187 1.3851518780601924 0.5 [YE]D{I|L}{I|L}KQA{I|L}DEY 5.3894 - 2595 1 2.271 115114.2 0.5799999833106995 2224 4268 6490 HBL1_DMSO_200M_050219_2,6494 HBL1_DMSO_200M_050219_2,6494,MWRCRRRCRVS False False AQYEDIAQKSKAEAE 34.353875 560.941210925579 1305063.0 6490.0 ENSG00000167768|ENST00000252244|KRT1 9.005032539367676 3.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6496 34.359 31.0 1810100.0 25 0 132340.0 + 3832 DAIRVTKTV 9 86 334.86991941719305 1001.5879288517792 3 334.8694640994072 MULTI CID FTMS 0 0 0 6495 1694978.75 0.5948115116946848 3 -0.0595169067382812 1 Unmodified _DAIRVTKTV_ ENSG00000120008|ENST00000263461|WDR11 37.77132515983256 0.0876909340306915 4 DA{I|L}RVTKTV 9 0 + 79.219 0.0 0.0 7.9093 7.9093 83.667 0.0 0.0 0.0 35.74031267727718 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.3054621874040891 2.0 1.0994850021680094 0.0 + + DA{I|L}RVTKTV;DA{I|L}RVTKVT;DA{I|L}R[KS]{I|L}TV;DA{I|L}R[KS]{I|L}VT;DA{I|L}RV{I|L}[KS]T;W{I|L}[VG]VTKTV;W{I|L}[VG]VTKVT;W{I|L}[VG][KS]{I|L}TV;W{I|L}[VG][KS]{I|L}VT;W{I|L}[VG]V{I|L}[KS]T 7.9093;7.6088;6.562;6.2614;5.5087;4.341;4.0404;2.9936;2.6931;1.9403 +;-;-;-;-;-;-;-;-;- + 296 + 1 2.271 52192.2 1.0 2225 4269 6495 HBL1_DMSO_200M_050219_2,6496 HBL1_DMSO_200M_050219_2,6496,DAIRVTKTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6497 34.361 118.0 756610.0 25 0 210360.0 + 36248 SYAPRRGEF 9 65 541.7727793892047 1081.5310058452094 2 541.7728149294853 MULTI CID FTMS 0 0 0 6495 591531.25 0.8763201977430947 2 -0.0460548400878906 2 Unmodified _SYAPRRGEF_ ENSG00000197157|ENST00000354725|SND1 10.823927491677226 0.5436922275383211 4 {M(Oxidation (M))|F} 1 8 16.722 0.0 0.0 1.5461 0.0 0.0 916.451749719036 0.0 916.451749719036 0.0 9.274400170273578 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.5461 + + 71 + 1 2.271 74179.2 1.0 2226 4269 6495 HBL1_DMSO_200M_050219_2,6497 HBL1_DMSO_200M_050219_2,6497,SYAPRRGEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6498 34.368 410.0 246210.0 25 0 42878.0 -1 0 121 472.2749696223293 471.2676931557293 1 472.2755920290947 MULTI CID FTMS 0 0 0 6495 148877.1875 0.9069203823553657 2 -0.0460548400878906 3 4 {[TV]|[{I|L}S]}V[PG] 5 -1 + 13.468 0.0 0.0 2.8578 2.8578 70.243 0.0 0.0 0.0 0.7905871926422474 0.4006983822611065 0.4006983822611065 5.563025007672876 0 0.0 1.0 0.0 0.0 {[TV]|[{I|L}S]}V[PG];[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}[PS]V;{[VA]|[{I|L}G]}[VP]S 2.8578;1.6774;1.5554;0.40097 -;-;-;- 54 1 2.271 83653.5 1.0 2227 4269 6495 HBL1_DMSO_200M_050219_2,6498 HBL1_DMSO_200M_050219_2,6498, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6499 34.375 382.0 225360.0 25 0 25755.0 + 25051 MPTSQSPAV 9 105 459.2232357151393 916.4319184970786 2 459.2232238650322 MULTI CID FTMS 0 0 0 6495 113629.1640625 0.034548406263271 -11 0.2606315612792969 4 Unmodified _MPTSQSPAV_ ENSG00000273841|ENST00000217893|TAF9 26.88365393820708 0.1891292719743517 4 [Q{I|L}][DG]MSPAV 9 5 [Q{I|L}][DG]MS + + 17.976 15.975 2.5307 1.9615 1.9615 44.557 0.0 0.0 0.0 0.0 1.899816693937904 0.0 0.0 0 0.5 0.0 0.0 0.0 [Q{I|L}][DG]MSPAV 1.9615 - 227 + 1 2.271 71023.2 1.0 2228 4269 6495 HBL1_DMSO_200M_050219_2,6499 HBL1_DMSO_200M_050219_2,6499,MPTSQSPAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6500 34.389 800.0 48357.0 25 0 11856.0 -1 0 34 1123.4617228804968 3367.3633392416905 3 1124.128832995892 MULTI CID FTMS 0 0 0 6495 90896.2890625 0.6880534422291117 -6 0.1905097961425781 5 4 E 1 -1 6.9897 0.0 0.0 0.20757 0.0 0.0 2711.13447068876 524.1639498346311 3235.298420523391 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20757 - 5 + 1 2.271 39555.0 0.3799999952316284 2229 4269 6495 HBL1_DMSO_200M_050219_2,6500 HBL1_DMSO_200M_050219_2,6500, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6502 34.395 194.0 353170.0 25 0 27326.0 + 4257 DAPRVGDEV 9 103 479.2355082368232 956.4564635404464 2 479.2354614138603 MULTI CID FTMS 0 0 0 6501 312068.625 0.1376968297974834 11 -0.309906005859375 1 Unmodified _DAPRVGDEV_ ENSG00000162783|ENST00000367577|IER5 16.149105407346934 0.3995459350917656 4 EGEV 4 6 32.735 0.0 0.0 3.4225 0.0 0.0 524.2710995927528 0.0 524.2710995927528 0.0 -3.1947654920421087 -3.1947654920421087 0.0 0 0.3807196863200844 0.0 0.0 0.0 EGEV 3.4225 - 165 1 2.271 57744.0 1.0 2230 4270 6501 HBL1_DMSO_200M_050219_2,6502 HBL1_DMSO_200M_050219_2,6502,DAPRVGDEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6503 34.4 252.0 323170.0 25 0 22363.0 35470 STLTDMYSN 9 107 516.2223508229558 1030.4301487127116 2 516.2231323122978 MULTI CID FTMS 0 0 0 6501 305098.5625 0.6284421760891276 2 -0.024322509765625 2 Unmodified _STLTDMYSN_ ENSG00000196132|ENST00000328439|MYT1;nc|ENSG00000196132|Q01538-2|MYT1 12.531546534597751 0.4974689918368763 4 AAE{I|L}{I|L} 5 9 19.362 0.0 0.0 1.879 0.0 0.0 0.0 530.1251309727303 530.1251309727303 4.000109629655135 0.0 0.0 0.0 0 0.0 0.0 0.6139829889124311 0.0 AAE{I|L}{I|L} 1.879 - 333 1 2.271 68180.2 1.0 2231 4270 6501 HBL1_DMSO_200M_050219_2,6503 HBL1_DMSO_200M_050219_2,6503,STLTDMYSN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6505 34.408 322.0 373730.0 25 0 27887.0 22492 LPVPGVKW 8 130 448.2721410177608 894.5297291023215 2 448.2728454470634 MULTI CID FTMS 0 0 0 6504 236094.34375 0.268436171190998 -13 0.3066864013671875 1 Unmodified _LPVPGVKW_ nc|ENSG00000155657|Q8WZ42-6|TTN 12.531546534597751 0.7257836412119636 4 [VP]R{[QS]|[NT]}VP{I|L} 8 6 + 26.405 0.0 0.0 2.9519 2.9519 77.006 0.0 0.0 0.0 2.8868292332295624 16.490502423289886 2.8868292332295624 12.596373105057564 0 0.1747425010840047 1.5228787452803376 0.0 0.0 [VP]R{[QS]|[NT]}VP{I|L};[{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PVP{I|L};[VP][VG][WK]P{I|L};{I|L}[RH]R[WK] 2.9519;1.5437;1.1922;0.6555 -;-;-;- 103 1 2.271 94561.7 1.0 2232 4271 6504 HBL1_DMSO_200M_050219_2,6505 HBL1_DMSO_200M_050219_2,6505,LPVPGVKW False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 6506 34.413 283.0 337910.0 25 0 83427.0 + 12828 GVTTSVTM 8 113 398.1981302477906 794.3817075623813 2 398.1975280642509 MULTI CID FTMS 0 0 0 6504 233234.828125 0.9556357205912752 -1 0.0108604431152343 2 Unmodified _GVTTSVTM_ REV__ENSG00000167600|ENST00000310054|CYP2S1;REV__ENST00000593890.1_1_19:41707198-41711900:+|nuORF;REV__nc|ENSG00000167600|Q96SQ9-2|CYP2S1 14.581692164780916 0.6954967302934248 4 {[YD]|[{M(Oxidation (M))|F}M]}[KP]YG 6 -1 22.252 0.0 0.0 2.8012 0.0 0.0 0.0 68.05125604801015 68.05125604801015 3.985475850783505 0.0 0.0 0.0 0 0.2396518287104437 2.0 0.0 0.4247425010840047 {[YD]|[{M(Oxidation (M))|F}M]}[KP]YG 2.8012 - 107 + 1 2.271 78716.3 1.0 2233 4271 6504 HBL1_DMSO_200M_050219_2,6506 HBL1_DMSO_200M_050219_2,6506,GVTTSVTM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6508 34.421 296.0 486310.0 25 0 25706.0 + -1 NISNCKIQV 9 132 359.1895663887732 1074.5468697665194 3 359.1894103884697 MULTI CID FTMS 0 0 0 6507 218401.359375 0.857038455633379 -2 0.024322509765625 1 Carbamidomethyl (C) _NISNC(Carbamidomethyl (C))KIQV_ REV__ENST00000223145.9_1_7:8128214-8128313:+|nuORF 20.41453444215458 0.284085796332423 4 {[QN]|[E{I|L}]|[KN]}[TA]ASTQRV 10 -1 + 39.16 0.0 0.0 3.6443 3.6443 63.001 0.0 0.0 0.0 7.877230817761625 15.02697515943353 7.877230817761625 0.1722032235195314 0 0.5440228147639203 1.154901959985743 0.3054621874040891 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}[TA]ASTQRV;{[QN]|[E{I|L}]|[KN]}[TA]ASQTRV;{NN|[MP]|[D{I|L}]|[EV]}[VS]ASTQRV;{NN|[MP]|[D{I|L}]|[EV]}[VS]ASQTRV;[Q{I|L}][DN]{[ET]|[MV]}TRV;{[QN]|[E{I|L}]|[KN]}[TA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QRV;{[QN]|[E{I|L}]|[KN]}{NN|[MP]|[D{I|L}]|[EV]}{[ET]|[MV]}TRV;[AG]{I|L}[DN]{[ET]|[MV]}TRV;{NN|[MP]|[D{I|L}]|[EV]}[VS]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QRV;[{I|L}T]{[CP]|[EA]}ASTQRV 3.6443;3.6283;2.9113;2.8952;2.5936;2.5302;2.5141;1.8228;1.7971;1.7564 -;-;-;-;-;-;-;-;-;- 417 1 2.271 123976.3 1.0 2234 4272 6507 HBL1_DMSO_200M_050219_2,6508 HBL1_DMSO_200M_050219_2,6508,NISNCKIQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6509 34.425 186.0 152520.0 25 0 10696.0 -1 0 62 537.1973141096944 536.1900376430943 1 537.1966430544853 MULTI CID FTMS 0 0 0 6507 307472.125 0.1720965364391131 -10 0.2848548889160156 2 4 [HM]{[{M(Oxidation (M))|F}C]|[YS]} 4 -1 + 8.2442 0.0 0.0 1.5375 1.5375 71.538 0.0 0.0 0.0 7.530834337684311 7.530834337684311 7.530834337684311 8.244171855527968 0 0.0 0.0 0.3807196863200844 0.0 [HM]{[{M(Oxidation (M))|F}C]|[YS]} 1.5375 - 7 + 1 2.271 28885.3 1.0 2235 4272 6507 HBL1_DMSO_200M_050219_2,6509 HBL1_DMSO_200M_050219_2,6509, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6510 34.438 744.0 206170.0 25 0 39737.0 28795 PYMMPQFLLY 10 109 434.8819719445425 0 434.8819763064384 PEAK CID FTMS 0 0 0 6507 136161.125 0.5614078941019299 63 -1.871185302734375 3 Unmodified _PYMMPQFLLY_ ENST00000352410.8_1_15:75190564-75190915:+|nuORF 4.3292370932331545 0.3961065659209837 4 P 1 9 6.9897 0.0 0.0 0.8055 0.0 0.0 269.40220604214034 498.27290372689896 767.6751097690393 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.8055 + + 2 + 1 2.271 126911.4 1.0 2236 4272 6507 HBL1_DMSO_200M_050219_2,6510 HBL1_DMSO_200M_050219_2,6510,PYMMPQFLLY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6511 34.45 719.0 162820.0 25 0 10451.0 + 35068 SQVALENANA 10 146 508.7545515641843 1015.4945501951686 2 508.7539245486259 MULTI CID FTMS 0 0 0 6507 136425.546875 0.6021719123847242 -2 0.024322509765625 4 Unmodified _SQVALENANA_ ENSG00000101361|ENST00000329276|NOP56;ENST00000470143.1_1_20:2633306-2634188:+|nuORF;ENST00000494697.5_1_20:2633306-2634895:+|nuORF 57.24910588100465 0.0438022649904578 4 {[DA]|[EG]}KA{I|L}ENA{[QG]|[NA]} 10 3 + 69.87 0.0 0.0 6.8804 6.8804 84.158 0.0 0.0 0.0 8.506307200306686 5.764837301042718 5.764837301042718 4.982653242032441 0 0.9247425010840048 1.154901959985743 1.0608029503079703 0.6861818737241735 {[DA]|[EG]}KA{I|L}ENA{[QG]|[NA]};{[DA]|[EG]}AK{I|L}ENA{[QG]|[NA]};{[QS]|[NT]}VA{I|L}ENA{[QG]|[NA]};{[DA]|[EG]}KA{I|L}EGGA{[QG]|[NA]};[AG]SVA{I|L}ENA{[QG]|[NA]};{[DA]|[EG]}AK{I|L}EGGA{[QG]|[NA]};{[SA]|[TG]}GVA{I|L}ENA{[QG]|[NA]};{[QS]|[NT]}VA{I|L}EGGA{[QG]|[NA]};{[QG]|[NA]}{[TV]|[{I|L}S]}{I|L}ENA{[QG]|[NA]};[AG]EK{I|L}ENA{[QG]|[NA]} 6.8804;6.3898;6.0428;5.9779;5.7796;5.4873;5.4706;5.1403;4.8536;4.7803 -;-;+;-;-;-;-;-;-;- + 1536 1 2.271 91661.5 1.0 2237 4272 6507 HBL1_DMSO_200M_050219_2,6511 HBL1_DMSO_200M_050219_2,6511,SQVALENANA True True SQVALENANA 34.450183 508.753924548626 1346435.125 6507.0 ENST00000494697.5_1_20:2633306-2634895:+|nuORF;;ENST00000470143.1_1_20:2633306-2634188:+|nuORF;;ENSG00000101361|ENST00000329276|NOP56 5.98051913579305 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6513 34.455 131.0 478460.0 25 0 54537.0 + 15807 ISFPVEMAD 9 96 504.7409398526873 1007.4673267721746 2 505.2441284060478 MULTI CID FTMS 0 0 0 6512 261163.15625 0.0017198266155058 36 -1.0407867431640625 1 Unmodified _ISFPVEMAD_ REV__ENST00000559466.1_1_21:9908333-9912191:-|nuORF 20.453626601364224 0.2830276176381075 4 EQAARV 6 -1 30.227 0.0 0.0 3.0003 0.0 0.0 335.11122074231656 0.0 335.11122074231656 0.0 15.53395642852614 0.0 0.0 0 0.2614393726401688 0.0 0.4247425010840047 0.0 EQAARV 3.0003 - 220 + 1 2.271 58002.1 1.0 2238 4273 6512 HBL1_DMSO_200M_050219_2,6513 HBL1_DMSO_200M_050219_2,6513,ISFPVEMAD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6514 34.469 800.0 213090.0 25 0 12512.0 + 45062 YPYGDGNRSV 10 149 564.2594949785671 1126.504437023934 2 564.2593871951103 MULTI CID FTMS 0 0 0 6512 147864.296875 0.029489721950876 21 -0.5707321166992188 2 Unmodified _YPYGDGNRSV_ ENSG00000156735|ENST00000287322|BAG4;ENST00000531211.1_1_8:70772071-70772629:-|nuORF;nc|ENSG00000156735|O95429-2|BAG4 29.84058131909904 0.2982332456971691 4 YPYGD 5 5 68.201 0.0 0.0 6.0542 0.0 0.0 0.0 528.2540328279789 528.2540328279789 53.996233543367794 0.0 0.0 0.0 0 1.024227503252014 2.0 0.0 0.0 + YPYGD 6.0542 + + 604 + 1 2.271 135601.0 0.8199999928474426 2239 4273 6512 HBL1_DMSO_200M_050219_2,6514 HBL1_DMSO_200M_050219_2,6514,YPYGDGNRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6515 34.471 101.0 983640.0 25 0 158240.0 + 22386 LPSSTHTI 8 100 428.23230827267713 854.4500636121543 2 428.2325012087822 MULTI CID FTMS 0 0 0 6512 452103.75 0.6509877498037675 -2 0.0502395629882812 3 Unmodified _LPSSTHTI_ ENSG00000100225|ENST00000266087|FBXO7;ENST00000492535.1_1_22:32889009-32894514:+|nuORF;nc|ENSG00000100225|Q9Y3I1-2|FBXO7;nc|ENSG00000100225|Q9Y3I1-3|FBXO7 53.57557251787612 0.1224291679108181 4 {I|L}PS 3 5 48.474 0.0 0.0 5.6731 0.0 0.0 0.0 554.2584932916624 554.2584932916624 32.662486627213525 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.805462187404089 0.0 + {I|L}PS 5.6731 + + 143 + 1 2.271 81750.9 1.0 2240 4273 6512 HBL1_DMSO_200M_050219_2,6515 HBL1_DMSO_200M_050219_2,6515,LPSSTHTI True True LPSSTHTI 34.471287 428.232501208782 3462452.0 6512.0 nc|ENSG00000100225|Q9Y3I1-3|FBXO7;;ENST00000492535.1_1_22:32889009-32894514:+|nuORF;;ENSG00000100225|ENST00000266087|FBXO7;;nc|ENSG00000100225|Q9Y3I1-2|FBXO7 2.4158974091211958 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6516 34.474 132.0 333870.0 25 0 31487.0 + 39130 TYHTAASTL 9 88 482.74047565793 963.46639838266 2 482.7406188845634 MULTI CID FTMS 0 0 0 6512 430949.65625 0.9019114882885616 1 -0.0375404357910156 4 Unmodified _TYHTAASTL_ ENSG00000124641|ENST00000265350|MED20;ENST00000467535.5_1_6:41880803-41888587:-|nuORF;nc|ENSG00000288721|Q9H944-2|MED20 57.47134341890925 0.0274820932774257 4 [HT]YTAAST{I|L} 9 2 + 49.046 0.0 0.0 5.0906 5.0906 84.653 0.0 0.0 0.0 3.65279269351241 29.83796566865003 3.65279269351241 14.608247441199126 0 0.8935078169319297 0.0 1.424742501084005 0.0 [HT]YTAAST{I|L};{[MG]|[TS]}[WQ]AAST{I|L};[{I|L}T][C(Carbamidomethyl (C))Q]AAST{I|L};[HT]Y{[QD]|[EN]|[WG]|[KD]|[RS]}ST{I|L};[HT]YT[QT]T{I|L};[HT]Y[KS]DT{I|L};[HT]AA[YT]ST{I|L};{[MG]|[TS]}[QP][KC]ST{I|L};{[MG]|[TS]}[RH]{[{M(Oxidation (M))|F}C]|[YS]}T{I|L};{[MG]|[TS]}[WQ][QT]T{I|L} 5.0906;3.5744;3.4569;2.8904;2.1371;1.7241;1.6166;1.5514;1.2961;0.62091 -;-;-;-;-;-;-;-;-;- 184 1 2.271 39541.6 1.0 2241 4273 6512 HBL1_DMSO_200M_050219_2,6516 HBL1_DMSO_200M_050219_2,6516,TYHTAASTL True True TYHTAASTL 34.473966 482.740618884563 3061039.5 6512.0 nc|ENSG00000288721|Q9H944-2|MED20;;ENST00000467535.5_1_6:41880803-41888587:-|nuORF;;ENSG00000124641|ENST00000265350|MED20 8.96707820892334 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6517 34.488 800.0 267260.0 25 0 12071.0 + 34932 SQIRETQQL 9 178 551.7965371702389 1101.5785214072778 2 551.7961303591728 MULTI CID FTMS 0 0 0 6512 143834.109375 0.1701324371857625 -3 0.0611000061035156 5 Unmodified _SQIRETQQL_ ENSG00000186283|ENST00000367627|TOR3A;ENST00000472001.1_1_1:179057051-179060848:+|nuORF;ENST00000495145.1_1_1:179054938-179057273:+|nuORF;nc|ENSG00000186283|Q9H497-2|TOR3A;nc|ENSG00000186283|Q9H497-3|TOR3A 96.93554129104106 0.0121609977933358 4 [AG]S{I|L}RETQQ{I|L} 10 3 + 91.738 0.0 0.0 8.3279 8.3279 83.628 0.0 0.0 0.0 3.917731411351753 16.53212513775344 3.917731411351753 2.698405410982616 0 1.3441876774005248 2.0 1.3996498648046138 0.2396518287104437 [AG]S{I|L}RETQQ{I|L};[AG]S{I|L}W{I|L}SQQ{I|L};{[QS]|[NT]}{I|L}RETQQ{I|L};[AG]S{I|L}RTEQQ{I|L};{[QS]|[NT]}{I|L}W{I|L}SQQ{I|L};{[QS]|[NT]}{I|L}RTEQQ{I|L};[AG]S{I|L}WVTQQ{I|L};[AG]{I|L}SRETQQ{I|L};[AG]S{I|L}RETQ[AG]{I|L};[AG]S{I|L}RET[AG]Q{I|L} 8.3279;8.083;7.9723;7.9667;7.9449;7.611;7.5607;7.5152;7.496;7.496 -;-;+;-;-;-;-;-;-;- + 21932 1 2.271 159094.8 0.6499999761581421 2242 4273 6512 HBL1_DMSO_200M_050219_2,6517 HBL1_DMSO_200M_050219_2,6517,SQIRETQQL True True SQIRETQQL 34.487797 551.796130359173 9135317.0 6512.0 nc|ENSG00000186283|Q9H497-2|TOR3A;;ENST00000472001.1_1_1:179057051-179060848:+|nuORF;;ENST00000495145.1_1_1:179054938-179057273:+|nuORF;;nc|ENSG00000186283|Q9H497-3|TOR3A;;chr1:179085893-179087917|17|11.71|0.32|5.18|+|0|TOR3A,None|1;;ENSG00000186283|ENST00000367627|TOR3A 6.001026471455892 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6519 34.502 647.0 191940.0 25 0 18992.0 + 41135 VPADASAHI 9 123 440.7300241621157 879.4454953910315 2 440.7298461794853 MULTI CID FTMS 0 0 0 6518 112082.1875 0.5150126896164123 4 -0.1417236328125 1 Unmodified _VPADASAHI_ ENSG00000135912|ENST00000392102|TTLL4 34.10243960390752 0.1078313939113124 4 VPADASAH{I|L} 9 0 + 59.329 0.0 0.0 6.7462 6.7462 59.521 0.0 0.0 0.0 24.22508200162774 0.0 0.0 0.0 0 0.4749073637206092 1.5228787452803376 0.0 0.0 + + VPADASAH{I|L};VPADASA{I|L}H;VPAD[QT]{I|L}H;VPAD[QT]H{I|L};VPA[TA][DG]H{I|L};VPA[TA][DG]{I|L}H;VPW[WR]H;VPAD[WP]PV;VPA[KC]S{I|L}Y;VPA[KC]SY{I|L} 6.7462;6.7462;5.9755;5.9755;5.1485;5.1485;4.8703;4.4852;4.0547;3.8115 +;-;-;-;-;-;-;-;-;- + 536 + 1 2.271 99182.8 1.0 2243 4274 6518 HBL1_DMSO_200M_050219_2,6519 HBL1_DMSO_200M_050219_2,6519,VPADASAHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6520 34.515 728.0 341220.0 25 0 78078.0 -1 0 92 1095.7766770004068 3284.3082016014205 3 1096.111254870892 MULTI CID FTMS 0 0 0 6518 484556.375 0.2529637064764291 -7 0.2201004028320312 2 4 VTHTVKY 7 -1 29.647 0.0 0.0 0.90269 0.0 0.0 2165.7653716380646 287.0540560358032 2452.819427673868 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3226825097560422 0.5994850021680094 VTHTVKY 0.90269 - 1924 + 1 2.271 204240.6 1.0 2244 4274 6518 HBL1_DMSO_200M_050219_2,6520 HBL1_DMSO_200M_050219_2,6520, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6521 34.529 800.0 338440.0 25 0 38821.0 + 11215 GEPIRAEGV 9 156 464.2485375819246 926.4825222306492 2 464.2483398318291 MULTI CID FTMS 0 0 0 6518 267946.5625 0.1677381539082255 32 -0.8021812438964844 3 Unmodified _GEPIRAEGV_ REV__ENST00000560032.1_1_14:24641799-24642251:+|nuORF 22.736283301280096 0.2418982879461534 4 {[DA]|[EG]}PP 4 -1 38.817 0.0 0.0 4.1897 0.0 0.0 0.0 543.2906545513396 543.2906545513396 27.034380941159565 0.0 0.0 0.0 0 0.7134679910804405 1.6989700043360187 0.0 0.0 {[DA]|[EG]}PP 4.1897 - 70 + 1 2.271 204074.2 0.8999999761581421 2245 4274 6518 HBL1_DMSO_200M_050219_2,6521 HBL1_DMSO_200M_050219_2,6521,GEPIRAEGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6522 34.532 172.0 555510.0 25 0 33438.0 + 31894 RTNSTFNQV 9 113 533.7675273634131 1065.5205017936262 2 533.7675659060478 MULTI CID FTMS 0 0 0 6518 267466.15625 0.2854699426486357 -3 0.0877799987792968 4 Unmodified _RTNSTFNQV_ ENSG00000063177|ENST00000549920|RPL18;ENST00000547892.1_1_19:49120227-49120731:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18 66.45667989310934 0.0225072657982126 4 {[QD]|[EN]|[WG]|[KD]|[RS]}KST{M(Oxidation (M))|F}NQV 9 2 + 63.092 0.0 0.0 5.9212 5.9212 73.496 0.0 0.0 0.0 0.9741845761653424 14.973024840566469 0.9741845761653424 0.9741845761653424 0 0.5629529932484498 0.0 1.1307196863200843 1.0114393726401687 {[QD]|[EN]|[WG]|[KD]|[RS]}KST{M(Oxidation (M))|F}NQV;GG{I|L}[KC]T{M(Oxidation (M))|F}NQV;[{I|L}P][WY]{M(Oxidation (M))|F}NQV;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]T{M(Oxidation (M))|F}NQV;{[QD]|[EN]|[WG]|[KD]|[RS]}KST{M(Oxidation (M))|F}N[AG]V;{[QD]|[EN]|[WG]|[KD]|[RS]}KST{M(Oxidation (M))|F}GGQV;GG{I|L}[KC]T{M(Oxidation (M))|F}GGQV;GG{I|L}[KC]T{M(Oxidation (M))|F}N[AG]V;{[{M(Oxidation (M))|F}D]|MM}[VP]T{M(Oxidation (M))|F}NQV;[{I|L}P][WY]{M(Oxidation (M))|F}N[AG]V 5.9212;5.8298;5.1698;5.0995;5.057;5.057;4.9697;4.9697;4.7224;4.3005 -;-;-;-;-;-;-;-;-;- 1207 1 2.271 80090.8 1.0 2246 4274 6518 HBL1_DMSO_200M_050219_2,6522 HBL1_DMSO_200M_050219_2,6522,RTNSTFNQV True True RTNSTFNQV 34.532093 533.767565906048 10096282.0 6518.0 ENST00000547892.1_1_19:49120227-49120731:-|nuORF;;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;;nc|ENSG00000063177|Q07020-2|RPL18;;ENSG00000063177|ENST00000549920|RPL18;;ENST00000552705.5_1_19:49119841-49122400:-|nuORF 6.747008164723714 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6523 34.538 319.0 263300.0 25 0 20889.0 + + -1 RYGDGGSTF 9 106 480.214597776332 958.414642619464 2 480.2146179080009 MULTI CID FTMS 0 0 0 6518 237838.375 1.0 0 0.0 5 2 Oxidation (M) _M(Oxidation (M))LTPM(Oxidation (M))STF_ ENST00000515481.5_1_5:179044503-179045371:-|nuORF;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502904.5_1_5:179043989-179045371:-|nuORF 40.44857923139169 0.2267865117615937 4 [{M(Oxidation (M))|F}T]{[QD]|[EN]|[WG]|[KD]|[RS]}GGST{M(Oxidation (M))|F} 9 -1 + 51.903 0.0 0.0 5.4155 5.4155 76.105 0.0 0.0 0.0 0.915149811213496 36.41827190205533 0.915149811213496 3.4678748622465605 0 1.0 0.0 1.2059771852360797 0.0 [{M(Oxidation (M))|F}T]{[QD]|[EN]|[WG]|[KD]|[RS]}GGST{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]{[QD]|[EN]|[WG]|[KD]|[RS]}NST{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]{[WN]|[YH]}GST{M(Oxidation (M))|F};[HM][NP][WQ]{M(Oxidation (M))|F} 5.4155;5.0537;4.7396;0.46471 -;-;-;- 378 1 2.271 68288.3 1.0 2247 4274 6518 HBL1_DMSO_200M_050219_2,6523 HBL1_DMSO_200M_050219_2,6523,MLTPMSTF False False RYGDGGSTF 34.537899 480.214617908001 1442466.0 6518.0 ENST00000515481.5_1_5:179044503-179045371:-|nuORF;;ENSG00000169045|ENST00000393432|HNRNPH1;;ENST00000502904.5_1_5:179043989-179045371:-|nuORF 5.910879453023274 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6524 34.542 225.0 387220.0 25 0 71947.0 -1 VDIGELLM 8 96 453.2377218507879 904.460890768376 2 453.2354003787041 MULTI CID FTMS 0 0 0 6518 175663.734375 0.65563447223732 -1 0.0375404357910156 6 Oxidation (M) _VDIGELLM(Oxidation (M))_ ENSG00000175445|ENST00000650287|LPL 5.230669730166228 0.792582437072536 4 [DV]YG 4 -1 33.5 0.0 0.0 3.7039 0.0 0.0 0.0 467.2627708925568 467.2627708925568 22.66247903129606 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [DV]YG 3.7039 - 83 + 1 2.271 73415.0 1.0 2248 4274 6518 HBL1_DMSO_200M_050219_2,6524 HBL1_DMSO_200M_050219_2,6524,VDIGELLM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6526 34.547 11.0 5714900.0 25 0 978980.0 + 4338 DASLQPRNV 9 72 500.2650106665505 998.515468399901 2 500.2647888064384 MULTI CID FTMS 0 0 0 6525 5681120.5 0.7760132043748131 -4 0.1420097351074218 1 Unmodified _DASLQPRNV_ ENSG00000124226|ENST00000244061|RNF114;nc|ENSG00000124226|Q9Y508-2|RNF114 58.6788170122104 0.0268135626297836 4 {[DA]|[EG]}S{I|L}QV 6 3 63.901 0.0 0.0 6.3996 0.0 0.0 0.0 382.18503748111567 382.18503748111567 45.37138160647259 0.0 0.0 0.0 0 1.274227503252014 2.0 0.0 0.4247425010840047 {[DA]|[EG]}S{I|L}QV 6.3996 - 251 + 1 2.271 53704.7 1.0 2249 4275 6525 HBL1_DMSO_200M_050219_2,6526 HBL1_DMSO_200M_050219_2,6526,DASLQPRNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6527 34.554 424.0 284760.0 25 0 75348.0 -1 0 47 1108.8053983926002 3323.394365778001 3 1109.140063464642 MULTI CID FTMS 0 0 0 6525 546058.75 0.5847325203463151 1 -0.0461959838867187 2 4 GYW 3 -1 11.427 0.0 0.0 0.34383 0.0 0.0 1944.6777743320824 969.5415838426104 2914.2193581746924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYW 0.34383 - 20 + 1 2.271 106506.9 1.0 2250 4275 6525 HBL1_DMSO_200M_050219_2,6527 HBL1_DMSO_200M_050219_2,6527, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6528 34.559 259.0 460780.0 25 0 30381.0 -1 0 104 620.3133180947808 619.3060416281808 1 620.3137084841728 MULTI CID FTMS 0 0 0 6525 469936.6875 1.0 0 0.0 3 4 PPPQN 5 -1 36.317 0.0 0.0 5.8642 0.0 0.0 68.03510966006941 0.0 68.03510966006941 0.0 11.848331157524974 0.0 0.0 0 0.0 0.0 0.0 1.2416440611282626 PPPQN 5.8642 - 292 + 1 2.271 90428.5 1.0 2251 4275 6525 HBL1_DMSO_200M_050219_2,6528 HBL1_DMSO_200M_050219_2,6528, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6529 34.563 231.0 362080.0 25 0 46040.0 -1 0 91 422.123007315197 842.2314616971942 2 422.1231872439384 MULTI CID FTMS 0 0 0 6525 319592.875 0.3791137026161252 -10 0.3218727111816406 4 4 {I|L} 1 -1 11.259 0.0 0.0 1.3368 0.0 0.0 711.1364127243411 0.0 711.1364127243411 0.0 4.269359821608809 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3368 - 12 + 1 2.271 68470.9 1.0 2252 4275 6525 HBL1_DMSO_200M_050219_2,6529 HBL1_DMSO_200M_050219_2,6529, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6530 34.567 211.0 302930.0 25 0 33191.0 + 39128 TYHASGAEL 9 97 474.7253978138708 947.4362426945416 2 474.7252685427666 MULTI CID FTMS 0 0 0 6525 240751.5 0.7849973512618111 -1 0.054229736328125 5 Unmodified _TYHASGAEL_ ENSG00000198911|ENST00000361204|SREBF2 34.10243960390752 0.1078313939113124 4 [AG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}A[SG]AE{I|L} 10 4 + 28.843 0.0 0.0 3.0444 3.0444 63.94 0.0 0.0 0.0 1.3909485187523885 13.358757848763824 1.3909485187523885 1.4448988376194514 0 0.0 0.8860566476931632 0.6549471895720985 0.0 [AG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}A[SG]AE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[SG]AE{I|L};[AG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[QS]|[NT]}AE{I|L};{[TV]|[{I|L}S]}[QA]{[C(Carbamidomethyl (C))G]|[NC]}AE{I|L};[HA][YT][SG]AE{I|L};{[QN]|[E{I|L}]|[KN]}{[DS]|[MA]|[CV]|TT}[DG]AE{I|L};[AG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}A{[QS]|[NT]}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QS]|[NT]}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}{NN|[MP]|[D{I|L}]|[EV]}[KC]E{I|L};{[TV]|[{I|L}S]}[QA][C(Carbamidomethyl (C))Q]E{I|L} 3.0444;2.8918;2.8585;2.7544;2.1541;2.0621;1.9531;1.8062;1.6744;1.6688 -;-;-;-;-;-;-;-;-;- 218 1 2.271 53494.9 1.0 2253 4275 6525 HBL1_DMSO_200M_050219_2,6530 HBL1_DMSO_200M_050219_2,6530,TYHASGAEL True True TYHASGAEL 34.567351 474.725268542767 1846923.375 6525.0 ENSG00000198911|ENST00000361204|SREBF2 4.557573715845744 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6531 34.573 299.0 404000.0 25 0 60554.0 -1 0 121 345.17977284038176 344.17249637378177 1 345.1784850955009 MULTI CID FTMS 0 0 0 6525 142833.28125 0.9300748550454204 -4 0.1420097351074218 6 4 {I|L} 1 -1 9.2694 0.0 0.0 2.6932 0.0 0.0 213.077538953663 0.0 213.077538953663 0.0 2.2796597782486216 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.6932 - 19 + 1 2.271 101960.4 1.0 2254 4275 6525 HBL1_DMSO_200M_050219_2,6531 HBL1_DMSO_200M_050219_2,6531, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6532 34.579 350.0 262920.0 25 0 17167.0 + 12785 GVQRTAFGV 9 135 467.7587227322688 933.5028925313376 2 468.2367431521416 MULTI CID FTMS 0 0 0 -1 0 7 Unmodified _GVQRTAFGV_ REV__ENSG00000164434|ENST00000368444|FABP7;REV__nc|ENSG00000164434|O15540-2|FABP7 11.640296217721598 0.521594087909532 4 G{I|L}R 3 -1 26.995 0.0 0.0 2.8918 0.0 0.0 589.2990818369848 0.0 589.2990818369848 0.0 8.767959391884546 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 G{I|L}R 2.8918 - 207 1 2.271 74505.9 1.0 2255 4275 6525 HBL1_DMSO_200M_050219_2,6532 HBL1_DMSO_200M_050219_2,6532,GVQRTAFGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6533 34.588 523.0 288030.0 25 0 47632.0 + 18355 KVLVNREAV 9 150 514.3164768621723 1026.6184007911445 2 514.3152343630791 MULTI CID FTMS 0 0 0 6525 134544.875 0.0384675810367758 11 -0.2948532104492187 8 Unmodified _KVLVNREAV_ REV__ENST00000547566.5_1_12:54680505-54680764:+|nuORF 11.494710602746466 0.5255349189887087 4 KV{I|L}S 4 -1 39.09 0.0 0.0 3.8077 0.0 0.0 0.0 596.3171480768186 596.3171480768186 9.56530859430913 0.0 0.0 0.0 0 0.6861818737241735 0.744727494896694 0.0 0.0 KV{I|L}S 3.8077 - 675 + 1 2.271 120078.6 1.0 2256 4275 6525 HBL1_DMSO_200M_050219_2,6533 HBL1_DMSO_200M_050219_2,6533,KVLVNREAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6535 34.593 9.6 5146800.0 25 0 1266500.0 + 6131 DSYPRNPTV 9 63 524.7565015837678 1047.4984502343357 2 524.7568237185478 MULTI CID FTMS 0 0 0 6534 6527231.0 0.9314760032830977 1 -0.0108070373535156 1 Unmodified _DSYPRNPTV_ ENSG00000057252|ENST00000367619|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;nc|ENSG00000057252|P35610-3|SOAT1 26.268140514670165 0.1969607489560049 4 {[DS]|[MA]|[CV]|TT}YP 4 5 17.435 0.0 0.0 1.6644 0.0 0.0 0.0 582.3010347955686 582.3010347955686 4.3360688456422025 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {[DS]|[MA]|[CV]|TT}YP 1.6644 + + 59 + 1 2.259 47821.8 1.0 2257 4276 6534 HBL1_DMSO_200M_050219_2,6535 HBL1_DMSO_200M_050219_2,6535,DSYPRNPTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6536 34.599 352.0 332510.0 25 0 19875.0 + 36247 SYAPRRGEF 9 136 361.5175220489346 1081.530736747004 3 361.5170165896416 MULTI CID FTMS 0 0 0 6534 137033.078125 0.0702514513419786 9 -0.2423477172851562 2 Unmodified _SYAPRRGEF_ ENSG00000197157|ENST00000354725|SND1 13.90604991867851 0.4602628045680013 4 SYA[HM]Q 6 6 49.988 0.0 0.0 4.6219 0.0 0.0 0.0 361.2301119440063 361.2301119440063 38.39387718865866 0.0 0.0 0.0 0 0.0 2.0 0.0 1.1549471895720984 SYA[HM]Q 4.6219 - 116 + 1 2.259 100320.9 1.0 2258 4276 6534 HBL1_DMSO_200M_050219_2,6536 HBL1_DMSO_200M_050219_2,6536,SYAPRRGEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6538 34.604 80.0 742200.0 25 0 68131.0 19722 LGPEIMPLGL 10 81 520.2979203792493 1038.5812878252984 2 520.2987548708916 MULTI CID FTMS 0 0 0 6537 600223.1875 1.0 0 0.0 1 Unmodified _LGPEIMPLGL_ ENST00000470902.5_1_9:130911720-130912803:+|nuORF 10.073929032068715 0.6785112666868882 4 {[VA]|[{I|L}G]}PT 4 7 23.94 0.0 0.0 2.3051 0.0 0.0 0.0 667.354742851773 667.354742851773 13.226825097560422 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 {[VA]|[{I|L}G]}PT 2.3051 - 43 + 1 2.259 52984.1 1.0 2259 4277 6537 HBL1_DMSO_200M_050219_2,6538 HBL1_DMSO_200M_050219_2,6538,LGPEIMPLGL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6539 34.606 104.0 453120.0 25 0 75564.0 + 5749 DPNPQSTVV 9 99 478.7379517724085 955.461350611617 2 478.7376281619072 MULTI CID FTMS 0 0 0 6537 429229.03125 0.3538780810873842 -11 0.3677024841308594 2 Unmodified _DPNPQSTVV_ ENSG00000181222|ENST00000674977|POLR2A;ENST00000573603.1_1_17:7412268-7412987:+|nuORF;nc|ENSG00000181222|P24928|POLR2A 10.073929032068715 0.563993802247229 4 Y 1 9 16.99 0.0 0.0 1.7782 0.0 0.0 774.3867178985296 0.0 774.3867178985296 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.7782 - 55 + 1 2.259 41468.5 1.0 2260 4277 6537 HBL1_DMSO_200M_050219_2,6539 HBL1_DMSO_200M_050219_2,6539,DPNPQSTVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6540 34.609 159.0 364780.0 25 0 58855.0 + -1 MLQTLASLS 9 88 490.26072210857495 978.50689128395 2 490.2591735720634 MULTI CID FTMS 0 0 0 6537 357247.59375 0.6779881526821575 3 -0.0774269104003906 3 Oxidation (M) _M(Oxidation (M))LQTLASLS_ REV__ENSG00000116266|ENST00000370008|STXBP3 21.74664581756881 0.2544899275067181 4 YPWWKTV 7 -1 + 56.221 0.0 0.0 5.7456 5.7456 88.031 0.0 0.0 0.0 34.48869634303921 0.9416726747834758 0.9416726747834758 18.29812217439504 0 0.3252574989159953 1.6989700043360187 0.805462187404089 0.0 YPWWKTV;YP[KT]WWV;[DP]GTVK{[TV]|[{I|L}S]}Y;[DP]KEK{[TV]|[{I|L}S]}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}{I|L}[VP]Y;[DP]K{I|L}[HQ]{[QN]|[E{I|L}]|[KN]};[DP]K{I|L}[SG]{[TV]|[{I|L}S]}Y;Y[{I|L}T]{I|L}{I|L}D{[QN]|[E{I|L}]|[KN]};[DP]Y{I|L}{I|L}[VP]Y;[WR]{M(Oxidation (M))|F}WWV 5.7456;3.8756;2.9036;2.5447;2.1088;1.8429;1.3773;1.1142;0.94024;0.41929 -;-;-;-;-;-;-;-;-;- 193 + 1 2.259 48214.8 1.0 2261 4277 6537 HBL1_DMSO_200M_050219_2,6540 HBL1_DMSO_200M_050219_2,6540,MLQTLASLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6541 34.613 214.0 453550.0 25 0 69038.0 + 3422 AYYDPKTRAM 10 70 405.8661683233847 1214.5766755703542 3 405.8655578494072 MULTI CID FTMS 0 0 0 6537 200222.375 0.9597173895410672 -2 0.0570030212402343 4 Unmodified _AYYDPKTRAM_ ENSG00000164609|ENST00000297151|SLU7;ENST00000520841.1_1_5:159833399-159835410:-|nuORF 13.614867670302877 0.6190977555336379 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YDPK 6 4 52.664 0.0 0.0 4.336 0.0 0.0 0.0 474.2152302761791 474.2152302761791 38.90546909946898 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YDPK 4.336 + + 100 + 1 2.259 80991.4 1.0 2262 4277 6537 HBL1_DMSO_200M_050219_2,6541 HBL1_DMSO_200M_050219_2,6541,AYYDPKTRAM False True AYYDPKTRAM 34.613013 405.865557849407 1387372.25 6537.0 ENSG00000164609|ENST00000297151|SLU7;;ENST00000520841.1_1_5:159833399-159835410:-|nuORF 5.064768473307292 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6542 34.622 491.0 203670.0 25 0 31454.0 + 43956 YGSETGQVTI 10 125 527.7562087179552 1053.4978645027104 2 527.7567016482353 MULTI CID FTMS 0 0 0 6537 176212.265625 0.6708538776757217 -2 0.0570030212402343 5 Unmodified _YGSETGQVTI_ ENSG00000142661|ENST00000374434|MYOM3;nc|ENSG00000142661|Q5VTT5-3|MYOM3 25.399314129420983 0.3980215340001851 4 [YG]DEQ[KT]T{I|L} 9 5 [YG]D + + 45.239 15.528 4.6338 4.2942 4.2942 49.772 0.0 0.0 0.0 0.0 23.70165856629469 0.0 0.0 0 1.2302046884880935 0.0 0.805462187404089 0.2742275032520141 [YG]DEQ[KT]T{I|L} 4.2942 - 1251 + 1 2.259 81678.2 1.0 2263 4277 6537 HBL1_DMSO_200M_050219_2,6542 HBL1_DMSO_200M_050219_2,6542,YGSETGQVTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6543 34.63 447.0 131420.0 25 0 6691.9 + 11250 GESGGRIRWYS 11 98 634.3115087576184 1266.6084645820367 2 634.3112670779228 MULTI CID FTMS 0 0 0 6537 147457.546875 1.0 0 0.0 6 Unmodified _GESGGRIRWYS_ REV__ENSG00000128228|ENST00000248958|SDF2L1;REV__ENST00000466935.1_1_22:21996661-21997389:+|nuORF 8.155526934196011 0.8366696279279818 4 Q{I|L}SW{[{M(Oxidation (M))|F}C]|[YS]} 6 -1 29.213 0.0 0.0 2.3064 0.0 0.0 484.2770653660743 0.0 484.2770653660743 0.0 9.591831457879106 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 Q{I|L}SW{[{M(Oxidation (M))|F}C]|[YS]} 2.3064 - 71 1 2.259 48911.1 1.0 2264 4277 6537 HBL1_DMSO_200M_050219_2,6543 HBL1_DMSO_200M_050219_2,6543,GESGGRIRWYS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6545 34.634 19.0 2291400.0 25 0 413340.0 + 25052 MPTSQSPAV 9 72 459.2232357151393 916.4319184970786 2 459.2235900759697 MULTI CID FTMS 0 0 0 6544 3165278.5 0.9623878557642834 -2 0.0412979125976562 1 Unmodified _MPTSQSPAV_ ENSG00000273841|ENST00000217893|TAF9 26.88365393820708 0.1891292719743517 4 [PS][QT]MS 6 6 22.707 0.0 0.0 2.4778 0.0 0.0 0.0 282.14525619278 282.14525619278 3.2530272850235065 0.0 0.0 0.0 0 0.5 0.0 1.1307196863200843 0.0 [PS][QT]MS 2.4778 - 112 1 2.259 39733.7 1.0 2265 4278 6544 HBL1_DMSO_200M_050219_2,6545 HBL1_DMSO_200M_050219_2,6545,MPTSQSPAV False True MPTSQSPAV 34.634113 459.22359007597 70261976.0 6544.0 ENSG00000273841|ENST00000217893|TAF9 3.765428463617961 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6546 34.64 312.0 253750.0 25 0 10356.0 + 23028 LSKKLKSKD 9 109 349.5569811539941 0 349.5574828982353 PEAK CID FTMS 0 0 0 6544 76634.0546875 0.6808657273199521 1 -0.0102043151855468 2 Unmodified _LSKKLKSKD_ REV__ENSG00000206043|ENST00000579455|C18orf63 7.101721422024254 0.3444685223463735 4 {I|L}K 2 -1 8.5835 0.0 0.0 1.2313 0.0 0.0 55.64053570201481 397.2567843072876 452.8973200093024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}K 1.2313 + + 10 + 1 2.259 66104.8 1.0 2266 4278 6544 HBL1_DMSO_200M_050219_2,6546 HBL1_DMSO_200M_050219_2,6546,LSKKLKSKD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6548 34.649 379.0 257410.0 25 0 14151.0 + + 28815 QADITRETV 9 134 516.7667093968952 1031.5188658605905 2 516.7687866091728 MULTI CID FTMS 0 0 0 6547 108606.421875 0.681714050890146 -3 0.0515022277832031 1 Unmodified _QAACKYLHV_ ENSG00000105778|ENST00000318709|AVL9;nc|ENSG00000105778|Q8NBF6-2|AVL9 28.486842064014134 0.1687311288560894 4 QAD{I|L}R{[ET]|[MV]}TV 9 -1 + 48.901 0.0 0.0 4.7407 4.7407 51.435 0.0 0.0 0.0 12.07402149029418 6.588797561877314 6.588797561877314 0.0 0 0.5 1.0457574905606752 0.7614393726401688 0.0 QAD{I|L}R{[ET]|[MV]}TV;QAD{I|L}T{[RE]|[WV]}TV;QAD{I|L}[VG]{[ET]|[MV]}TV;{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}SGPGTV;QW{I|L}[VG]{[ET]|[MV]}TV;{[TV]|[{I|L}S]}[HQ]HGPGTV;{[QS]|[NT]}[H{I|L}]HGPGTV;{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]T[Y{M(Oxidation (M))|F}]V;{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T]R[Y{M(Oxidation (M))|F}]V 4.7407;4.7407;3.848;3.2783;2.2009;1.9842;1.1855;1.0587;1.0587 -;-;-;-;-;-;-;-;- 323 + 1 2.259 80515.5 1.0 2267 4279 6547 HBL1_DMSO_200M_050219_2,6548 HBL1_DMSO_200M_050219_2,6548,QAACKYLHV False False QADITRETV 34.648883 516.768786609173 1007486.125 6547.0 ENSG00000105778|ENST00000318709|AVL9;;nc|ENSG00000105778|Q8NBF6-2|AVL9 6.273593743642171 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6549 34.663 800.0 131590.0 25 0 7917.6 + 18178 KTVEGRELQSV 11 113 623.3445064554369 1244.6744599776737 2 623.3448364138603 MULTI CID FTMS 0 0 0 6547 122348.5 1.0 0 0.0 2 Unmodified _KTVEGRELQSV_ ENSG00000068394|ENST00000156109|GPKOW 27.289341220302404 0.4514405737498551 4 KTVE 4 7 48.488 0.0 0.0 3.8956 0.0 0.0 0.0 784.3949924082214 784.3949924082214 24.77629699328141 0.0 0.0 0.0 0 0.805462187404089 0.0 0.8494850021680094 0.0 + KTVE 3.8956 + + 95 + 1 2.259 83034.3 0.6200000047683716 2268 4279 6547 HBL1_DMSO_200M_050219_2,6549 HBL1_DMSO_200M_050219_2,6549,KTVEGRELQSV False True KTVEGRELQSV 34.662721 623.34483641386 690446.5 6547.0 ENSG00000068394|ENST00000156109|GPKOW 4.918837229410808 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6550 34.677 800.0 122540.0 25 0 8822.2 24446 MHDLVHTIN 9 123 540.2670706942474 0 540.2661620974541 PEAK CID FTMS 0 0 0 6547 93903.8125 1.0 0 0.0 3 Unmodified _MHDLVHTIN_ ENSG00000054282|ENST00000366541|SDCCAG8;nc|ENSG00000054282|Q86SQ7-2|SDCCAG8;nc|ENSG00000054282|Q86SQ7-3|SDCCAG8;nc|ENSG00000054282|Q86SQ7-4|SDCCAG8 7.910154910731844 0.3362437653303669 4 S 1 9 5.4846 0.0 0.0 0.50853 0.0 0.0 856.4186495898635 132.0458925836547 988.4645421735182 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.50853 - 17 + 1 2.259 77450.0 0.5400000214576721 2269 4279 6547 HBL1_DMSO_200M_050219_2,6550 HBL1_DMSO_200M_050219_2,6550,MHDLVHTIN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6552 34.682 82.0 930000.0 25 0 107260.0 + 4304 DARKPPVI 8 78 448.2721410177608 894.5297291023215 2 448.2720825076103 MULTI CID FTMS 0 0 0 6551 827145.25 0.9404532967716251 -4 0.0882339477539062 1 Unmodified _DARKPPVI_ ENSG00000142621|ENST00000688493|FHAD1;nc|ENSG00000142621|B1AJZ9-3|FHAD1;nc|ENSG00000142621|B1AJZ9-4|FHAD1;nc|ENSG00000142621|B1AJZ9|FHAD1 26.268140514670165 0.4916104673212489 4 {[DA]|[EG]}RKPPV{I|L} 8 0 + 45.073 0.0 0.0 5.0387 5.0387 71.226 0.0 0.0 0.0 17.140012553530966 38.083362792012 17.140012553530966 1.7609125905568137 0 0.25 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}RKPPV{I|L};{[DA]|[EG]}RKPVP{I|L};{[SA]|[TG]}RR[RH]{I|L} 5.0387;4.8419;0.55495 +;-;- + 68 1 2.248 63662.7 1.0 2270 4280 6551 HBL1_DMSO_200M_050219_2,6552 HBL1_DMSO_200M_050219_2,6552,DARKPPVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6553 34.685 171.0 392560.0 25 0 25227.0 + + 7203 EEQLQQIR 8 99 522.277780064253 1042.5410071953058 2 522.2786743044853 MULTI CID FTMS 0 0 0 6551 408186.53125 0.9306662009762114 3 -0.1062545776367187 2 Unmodified _EEQLQQLR_ ENSG00000186395|ENST00000269576|KRT10;ENSG00000186393|ENST00000335552|KRT26;Q7Z3Y9;P13645;P02535-1 64.23631603340823 0.116217441302575 4 EEQ{I|L}QQ{I|L}R 8 -1 + 73.624 0.0 0.0 7.062 7.062 90.433 0.0 0.0 0.0 22.21848749616356 13.222192947339195 13.222192947339195 9.262137858390815 0 0.4916440611282626 1.5228787452803376 0.0 1.0114393726401687 EEQ{I|L}QQ{I|L}R;EE[AG]{I|L}QQ{I|L}R;EEQ{I|L}[AG]Q{I|L}R;EEQ{I|L}Q[AG]{I|L}R;EEQ{I|L}QQR{I|L};EE[AG]{I|L}[AG]Q{I|L}R;EE[AG]{I|L}Q[AG]{I|L}R;EEQ{I|L}[AG][AG]{I|L}R;EEQ{I|L}Q[AG]R{I|L};EEQ{I|L}[AG]QR{I|L} 7.062;6.1736;6.1736;6.1736;5.7938;5.2904;5.2904;5.2904;4.9053;4.9053 +;-;-;-;-;-;-;-;-;- + 175 + 1 2.248 58046.4 1.0 2271 4280 6551 HBL1_DMSO_200M_050219_2,6553 HBL1_DMSO_200M_050219_2,6553,EEQLQQLR False False EEQLQQIR 34.685319 522.278674304485 2558395.75 6551.0 ENSG00000186395|ENST00000269576|KRT10;;ENSG00000186393|ENST00000335552|KRT26;;Q7Z3Y9;;P13645;;P02535-1 6.111705938975017 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6554 34.699 800.0 85024.0 25 0 4218.3 -1 0 89 694.3152122781553 2079.923807434666 3 694.6498290896416 MULTI CID FTMS 0 0 0 6551 135971.6875 0.4629932125235522 -14 0.44512939453125 3 4 GWTG[WR] 6 -1 39.754 0.0 0.0 1.9113 0.0 0.0 1318.595771220709 0.0 1318.595771220709 0.0 31.28653141768609 0.0 0.0 0 0.6861818737241735 0.0 0.9247425010840048 0.0 GWTG[WR] 1.9113 - 216 1 2.248 57608.4 0.6000000238418579 2272 4280 6551 HBL1_DMSO_200M_050219_2,6554 HBL1_DMSO_200M_050219_2,6554, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6556 34.715 800.0 198380.0 25 0 37443.0 + 3009 AVISHIDQT 9 133 492.2619801191556 982.5094073051112 2 492.2614929080009 MULTI CID FTMS 0 0 0 6555 88854.953125 0.874998201679197 -1 0.0226058959960937 1 Unmodified _AVISHIDQT_ ENSG00000134900|ENST00000376052|TPP2;ENST00000466153.5_1_13:103307300-103330663:+|nuORF;ENST00000482393.1_1_13:103309549-103320211:+|nuORF;nc|ENSG00000134900|P29144|TPP2 43.85829265575387 0.0542763391141878 4 {[VA]|[{I|L}G]}{I|L} 3 6 31.695 0.0 0.0 3.2259 0.0 0.0 0.0 696.2976778619749 696.2976778619749 15.72559982972642 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[VA]|[{I|L}G]}{I|L} 3.2259 + + 765 + 1 2.248 124934.6 0.5 2273 4281 6555 HBL1_DMSO_200M_050219_2,6556 HBL1_DMSO_200M_050219_2,6556,AVISHIDQT True True AVISHIDQT 34.715225 492.263 717147.875 6555.0 ENST00000466153.5_1_13:103307300-103330663:+|nuORF;;nc|ENSG00000134900|P29144|TPP2;;ENSG00000134900|ENST00000376052|TPP2;;ENST00000482393.1_1_13:103309549-103320211:+|nuORF 1.517449180285136 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6557 34.726 638.0 203210.0 25 0 39102.0 7438 EGNKEPDKTWV 11 95 434.8819719445425 0 434.8821594119072 PEAK CID FTMS 0 0 0 6555 131689.921875 0.5429726121482282 72 -2.5216522216796875 2 Unmodified _EGNKEPDKTWV_ ENSG00000111912|ENST00000392477|NCOA7;nc|ENSG00000111912|Q8NI08-2|NCOA7;nc|ENSG00000111912|Q8NI08-7|NCOA7 3.2813086475875832 0.4761840153648598 4 TTA 3 10 10.177 0.0 0.0 1.1728 0.0 0.0 96.32543109426928 495.2693270318969 591.5947581261662 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TTA 1.1728 - 12 + 1 2.248 105455.2 1.0 2274 4281 6555 HBL1_DMSO_200M_050219_2,6557 HBL1_DMSO_200M_050219_2,6557,EGNKEPDKTWV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6558 34.73 212.0 301540.0 25 0 27045.0 -1 VVMFPAVGV 9 109 467.7587227322688 933.5028925313376 2 467.7586852908134 MULTI CID FTMS 0 0 0 6555 124754.921875 0.9221876004849148 -2 0.0593376159667968 3 Oxidation (M) _VVM(Oxidation (M))FPAVGV_ ENST00000523271.1_1_8:28610202-28610277:+|nuORF 14.581692164780916 0.4419739649577144 4 {[QV]|[N{I|L}]|[RA]|[KV]}[HQ]PVQV 8 -1 + 25.585 0.0 0.0 2.7408 2.7408 77.244 0.0 0.0 0.0 6.670337752241743 12.15858386185287 6.670337752241743 14.719875180197848 0 0.4957416651753049 0.8860566476931632 0.0 0.1643943297944484 {[QV]|[N{I|L}]|[RA]|[KV]}[HQ]PVQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[Q{I|L}]VQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NAAVVQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQVVQV;[QP][HQ]VVQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GG[Q{I|L}]VQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GGAAVVQV 2.7408;1.1639;1.1091;1.0601;0.59906;0.17175;0.12273 -;-;-;-;-;-;- 299 1 2.248 56878.6 1.0 2275 4281 6555 HBL1_DMSO_200M_050219_2,6558 HBL1_DMSO_200M_050219_2,6558,VVMFPAVGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6559 34.737 393.0 248390.0 25 0 18760.0 + 3750 DAGGHNVTI 9 129 442.21706766673975 882.4195824002795 2 442.2160217165947 MULTI CID FTMS 0 0 0 6555 121291.9140625 0.0995546839323069 -10 0.2990455627441406 4 Unmodified _DAGGHNVTI_ ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1 27.628801355627647 0.1796483985696185 4 {[DA]|[EG]}[HN]NVT{I|L} 8 2 + 36.661 0.0 0.0 4.1545 4.1545 68.593 0.0 0.0 0.0 12.028937514676484 2.2011407381960097 2.2011407381960097 2.2011407381960097 0 1.079689690656103 2.0 0.0 0.0 {[DA]|[EG]}[HN]NVT{I|L};{[DA]|[EG]}[HN]KGE{I|L};{[DA]|[EG]}[HN]GGVT{I|L};[HN]NVTGE{I|L};[HN]NVADT{I|L};{[DA]|[EG]}QQ[HA]T{I|L};[{I|L}T]{[{M(Oxidation (M))|F}C]|[YS]}TGE{I|L};[HN]NVASE{I|L};[HN]N{[DA]|[EG]}VT{I|L};[HN]GGVTGE{I|L} 4.1545;3.9051;3.1049;2.7914;2.2487;2.1194;2.1168;2.1085;1.7977;1.7417 -;-;-;-;-;-;-;-;-;- 385 1 2.248 78059.0 1.0 2276 4281 6555 HBL1_DMSO_200M_050219_2,6559 HBL1_DMSO_200M_050219_2,6559,DAGGHNVTI False True DAGGHNVTI 34.737375 442.216021716595 15557035.0 6555.0 ENSG00000173692|ENST00000308696|PSMD1;;nc|ENSG00000173692|Q99460-2|PSMD1 5.240984280904134 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6561 34.745 184.0 283500.0 25 0 15121.0 + 34933 SQIRETQQL 9 88 551.7965371702389 1101.5785214072778 2 551.7968627810478 MULTI CID FTMS 0 0 0 6560 352160.40625 0.4165486785852371 6 -0.1829452514648437 1 Unmodified _SQIRETQQL_ ENSG00000186283|ENST00000367627|TOR3A;ENST00000472001.1_1_1:179057051-179060848:+|nuORF;ENST00000495145.1_1_1:179054938-179057273:+|nuORF;nc|ENSG00000186283|Q9H497-2|TOR3A;nc|ENSG00000186283|Q9H497-3|TOR3A 57.24910588100465 0.0276051374632116 4 {[QS]|[NT]}{I|L}RETQQ{I|L} 9 0 + 46.577 0.0 0.0 4.2282 4.2282 78.417 0.0 0.0 0.0 2.243012119929091 34.10273743745762 2.243012119929091 9.208187539523747 0 0.8979400086720375 0.0 0.3494850021680094 0.0 + + {[QS]|[NT]}{I|L}RETQQ{I|L};{[QS]|[NT]}{I|L}RET[AG]Q{I|L};{[QS]|[NT]}{I|L}RETQ[AG]{I|L};{[QS]|[NT]}{I|L}REAASQ{I|L};{[QS]|[NT]}{I|L}REG[TA]Q{I|L};[Q{I|L}][NG][KS]SQQ{I|L};[Q{I|L}][NG][KS]QSQ{I|L};[Q{I|L}][QT]{[RE]|[WV]}SQ{I|L};{[QS]|[NT]}{I|L}REGQ[TA]{I|L};{[QN]|[E{I|L}]|[KN]}P[DP][YK]Q{I|L} 4.2282;3.3923;3.3923;2.9759;2.7138;2.4678;2.0514;2.0049;2.0034;1.9442 +;-;-;-;-;-;-;-;-;- + 325 1 2.236 48229.5 1.0 2277 4282 6560 HBL1_DMSO_200M_050219_2,6561 HBL1_DMSO_200M_050219_2,6561,SQIRETQQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6562 34.748 197.0 399750.0 25 0 61229.0 + 5063 DGYEQAARV 9 102 504.7409398526873 1007.4673267721746 2 504.7407104372978 MULTI CID FTMS 0 0 0 6560 275694.875 0.0009452866909992 45 -1.1839370727539062 2 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 32.78568957990786 0.1150597335874693 4 [DG]YEQAARV 9 0 + 57.703 0.0 0.0 5.7276 5.7276 84.579 0.0 0.0 0.0 33.59550797172324 5.731136571674753 5.731136571674753 9.208187539523747 0 0.4247425010840047 0.8239087409443188 0.4247425010840047 0.2887254899964357 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YEV[NG]RV;[DG]YV[DN]ARV;[DG]YVE[NG]RV;[DG]YEV[{I|L}P]{[ES]|[DT]|[{I|L}C]};[DG]Q[YE]AARV;[DG]YVE[{I|L}P]{[ES]|[DT]|[{I|L}C]};[DG][AG][YE]AARV;{[QN]|[E{I|L}]|[KN]}QGPS{M(Oxidation (M))|F}[KC] 5.7276;4.8136;3.8664;3.4291;3.1303;3.0677;2.7366;2.37;1.8226;1.6017 +;-;-;-;-;-;-;-;-;- + 352 + 1 2.236 65734.8 1.0 2278 4282 6560 HBL1_DMSO_200M_050219_2,6562 HBL1_DMSO_200M_050219_2,6562,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6563 34.755 374.0 373780.0 25 0 67164.0 28527 PTMGTLDSCI 10 118 519.2374067275922 0 519.1387817263603 PEAK CID FTMS 0 0 0 6560 22497.810546875 0.4181100125459729 2 -0.0530433654785156 3 Unmodified _PTMGTLDSCI_ ENSG00000170075|ENST00000367282|GPR37L1 6.723162845929126 0.3961065659209837 4 PH 2 9 10.969 0.0 0.0 1.0583 0.0 0.0 131.96437749800378 667.3546846979124 799.3190621959161 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PH 1.0583 - 17 + 1 2.236 110314.3 1.0 2279 4282 6560 HBL1_DMSO_200M_050219_2,6563 HBL1_DMSO_200M_050219_2,6563,PTMGTLDSCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6564 34.769 800.0 202220.0 25 0 18267.0 + + 44062 IYQTSTGQY 9 163 530.7505721756189 1059.4865914180375 2 530.7510864138603 MULTI CID FTMS 0 0 0 6560 129562.734375 0.8105485092659642 1 -0.0453758239746093 4 Unmodified _YIRPDFFC_ nc|ENSG00000095794|Q03060-32|CREM;ENST00000472813.1_1_10:35464831-35468254:+|nuORF;nc|ENSG00000095794|Q03060-7|CREM;ENSG00000095794|ENST00000685392|CREM;ENST00000374711.5_1_10:35464603-35477327:+|nuORF;nc|ENSG00000095794|Q03060-25|CREM;ENST00000497686.1_1_10:35456653-35468254:+|nuORF;nc|ENSG00000095794|Q03060-1|CREM;nc|ENSG00000095794|Q03060-16|CREM;nc|ENSG00000095794|Q03060-13|CREM;nc|ENSG00000095794|Q03060-21|CREM;nc|ENSG00000095794|Q03060-15|CREM;nc|ENSG00000095794|Q03060-26|CREM;nc|ENSG00000095794|Q03060|CREM;nc|ENSG00000095794|Q03060-30|CREM;nc|ENSG00000095794|Q03060-2|CREM;nc|ENSG00000095794|Q03060-22|CREM;nc|ENSG00000095794|Q03060-12|CREM;ENST00000489388.5_1_10:35416112-35468254:+|nuORF;nc|ENSG00000095794|Q03060-14|CREM;nc|ENSG00000095794|Q03060-20|CREM;nc|ENSG00000095794|Q03060-6|CREM 14.581692164780916 0.6954967302934248 4 [Y{I|L}]QT[NP]P{NN|[MP]|[D{I|L}]|[EV]} 9 -1 + 24.049 0.0 0.0 2.2699 2.2699 63.154 0.0 0.0 0.0 2.120889123272008 5.174837133936318 2.120889123272008 1.7069622716897612 0 0.0 1.5228787452803376 0.0 0.0 [Y{I|L}]QT[NP]P{NN|[MP]|[D{I|L}]|[EV]};[Y{I|L}]Q[Y{M(Oxidation (M))|F}]V{NN|[MP]|[D{I|L}]|[EV]};[AG]Y{I|L}T[NP]P{NN|[MP]|[D{I|L}]|[EV]};[AG]Y{I|L}[Y{M(Oxidation (M))|F}]V{NN|[MP]|[D{I|L}]|[EV]};[Y{I|L}][AG]T[NP]P{NN|[MP]|[D{I|L}]|[EV]};[YQ]{I|L}T[NP]P{NN|[MP]|[D{I|L}]|[EV]};[Y{I|L}][AG][Y{M(Oxidation (M))|F}]V{NN|[MP]|[D{I|L}]|[EV]};[AG]YT{I|L}[NP]P{NN|[MP]|[D{I|L}]|[EV]};[YQ]{I|L}[Y{M(Oxidation (M))|F}]V{NN|[MP]|[D{I|L}]|[EV]};[{I|L}T][C(Carbamidomethyl (C))R]WP{NN|[MP]|[D{I|L}]|[EV]} 2.2699;2.1087;2.0697;1.9035;1.4007;1.2828;1.2345;1.169;1.1217;0.9559 -;-;-;-;-;-;-;-;-;- 620 1 2.236 124090.1 0.6499999761581421 2280 4282 6560 HBL1_DMSO_200M_050219_2,6564 HBL1_DMSO_200M_050219_2,6564,YIRPDFFC False False IYQTSTGQY 34.768885 530.75108641386 1152382.625 6560.0 nc|ENSG00000095794|Q03060-32|CREM;;ENST00000472813.1_1_10:35464831-35468254:+|nuORF;;nc|ENSG00000095794|Q03060-7|CREM;;ENSG00000095794|ENST00000685392|CREM;;ENST00000374711.5_1_10:35464603-35477327:+|nuORF;;nc|ENSG00000095794|Q03060-25|CREM;;ENST00000497686.1_1_10:35456653-35468254:+|nuORF;;nc|ENSG00000095794|Q03060-1|CREM;;nc|ENSG00000095794|Q03060-16|CREM;;nc|ENSG00000095794|Q03060-13|CREM;;nc|ENSG00000095794|Q03060-21|CREM;;nc|ENSG00000095794|Q03060-15|CREM;;nc|ENSG00000095794|Q03060-26|CREM;;nc|ENSG00000095794|Q03060|CREM;;nc|ENSG00000095794|Q03060-30|CREM;;nc|ENSG00000095794|Q03060-2|CREM;;nc|ENSG00000095794|Q03060-22|CREM;;nc|ENSG00000095794|Q03060-12|CREM;;ENST00000489388.5_1_10:35416112-35468254:+|nuORF;;nc|ENSG00000095794|Q03060-14|CREM;;nc|ENSG00000095794|Q03060-20|CREM;;nc|ENSG00000095794|Q03060-6|CREM 5.959334850311279 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6565 34.783 800.0 34725.0 25 0 7397.7 -1 0 26 1103.1016328100882 3306.2830690304645 3 1104.102099597454 MULTI CID FTMS 0 0 0 6560 81167.4921875 0.9632436417619354 -1 0.0382728576660156 5 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.236 32836.0 0.3799999952316284 2281 4282 6560 HBL1_DMSO_200M_050219_2,6565 HBL1_DMSO_200M_050219_2,6565, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6567 34.787 113.0 861510.0 25 0 220250.0 -1 0 49 1095.7766770004068 3284.3082016014205 3 1096.111376941204 MULTI CID FTMS 0 0 0 6566 1692830.625 0.8837458991986434 2 -0.0478591918945312 1 4 VTVTS 5 -1 22.312 0.0 0.0 0.67936 0.0 0.0 2368.8389766031773 425.1802462213501 2794.019222824528 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 VTVTS 0.67936 - 95 + 1 2.236 89460.5 1.0 2282 4283 6566 HBL1_DMSO_200M_050219_2,6567 HBL1_DMSO_200M_050219_2,6567, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6568 34.79 146.0 302840.0 25 0 16281.0 + 25826 NLDFLMSQV 9 86 533.7675273634131 1065.5205017936262 2 533.7676269412041 MULTI CID FTMS 0 0 0 6566 316411.4375 0.337709847791247 6 -0.1433258056640625 2 Unmodified _NLDFLMSQV_ REV__ENSG00000105738|ENST00000222345|SIPA1L3 32.78568957990786 0.1150597335874693 4 [{I|L}P][WY]{M(Oxidation (M))|F}NQV 8 -1 + 49.258 0.0 0.0 4.6229 4.6229 77.258 0.0 0.0 0.0 7.055912674110019 4.247425010840047 4.247425010840047 7.055912674110019 0 0.3054621874040891 2.0 0.0 0.3807196863200844 [{I|L}P][WY]{M(Oxidation (M))|F}NQV;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}M{M(Oxidation (M))|F}NQV;[{I|L}P][WY]{M(Oxidation (M))|F}N[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]T{M(Oxidation (M))|F}NQV;[{I|L}P][WY]{M(Oxidation (M))|F}GGQV;{[{M(Oxidation (M))|F}D]|MM}[VP]T{M(Oxidation (M))|F}NQV;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}M{M(Oxidation (M))|F}GGQV;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}M{M(Oxidation (M))|F}N[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]T{M(Oxidation (M))|F}N[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]T{M(Oxidation (M))|F}GGQV 4.6229;3.9607;3.7536;3.5609;3.3963;3.2784;3.0965;3.0965;2.6967;2.6967 -;-;-;-;-;-;-;-;-;- 281 1 2.236 38544.7 1.0 2283 4283 6566 HBL1_DMSO_200M_050219_2,6568 HBL1_DMSO_200M_050219_2,6568,NLDFLMSQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6570 34.804 623.0 191250.0 25 0 20943.0 + + -1 DVYGPGKAV 9 116 453.2377218507879 904.460890768376 2 453.2385131716728 MULTI CID FTMS 0 0 0 6569 110246.578125 0.4114762635675912 9 -0.2170066833496093 1 Oxidation (M) _VVDIM(Oxidation (M))EAL_ ENSG00000078142|ENST00000262039|PIK3C3 22.4526382665184 0.5719518724627818 4 [DV]YG 4 -1 33.188 0.0 0.0 3.6693 0.0 0.0 0.0 467.2634158308069 467.2634158308069 20.08864383480216 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [DV]YG 3.6693 - 236 + 1 2.236 93892.7 1.0 2284 4284 6569 HBL1_DMSO_200M_050219_2,6570 HBL1_DMSO_200M_050219_2,6570,VVDIMEAL False False DVYGPGKAV 34.803585 453.238513171673 1223469.375 6569.0 ENSG00000078142|ENST00000262039|PIK3C3 3.3907861709594727 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6571 34.817 800.0 68855.0 25 0 17234.0 32672 SDDCSSSE 8 58 829.250089732771 828.242813266171 1 829.2521850466728 MULTI CID FTMS 0 0 0 6569 99389.390625 0.5482570922430526 -4 0.113922119140625 2 Unmodified _SDDCSSSE_ ENSG00000250423|ENST00000691062|KIAA1210;nc|ENSG00000250423|Q9ULL0|KIAA1210 2.577480529830294 0.808687252328423 4 N 1 8 6.1536 0.0 0.0 0.74297 0.0 0.0 408.14010438120846 303.02890298286263 711.1690073640711 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 N 0.74297 - 3 + 1 2.236 44955.5 0.4699999988079071 2285 4284 6569 HBL1_DMSO_200M_050219_2,6571 HBL1_DMSO_200M_050219_2,6571,SDDCSSSE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6572 34.831 760.0 207660.0 25 0 12178.0 + 36214 SVYGKLRKV 9 167 350.5540714360448 1048.6403849083345 3 350.5533630251884 MULTI CID FTMS 0 0 0 6569 94192.296875 0.95366843864679 -1 0.0076675415039062 3 Unmodified _SVYGKLRKV_ ENSG00000172890|ENST00000319023|NADSYN1;ENST00000530831.1_1_11:71208417-71209628:+|nuORF;ENST00000531236.1_1_11:71196518-71209628:+|nuORF;nc|ENSG00000172890|Q6IA69-2|NADSYN1 29.84058131909904 0.1515068451768857 4 [VS]YGK{I|L} 6 3 54.526 0.0 0.0 5.1996 0.0 0.0 0.0 398.2546175592407 398.2546175592407 44.52561882712928 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3807196863200844 + [VS]YGK{I|L} 5.1996 + + 56 + 1 2.236 133054.9 1.0 2286 4284 6569 HBL1_DMSO_200M_050219_2,6572 HBL1_DMSO_200M_050219_2,6572,SVYGKLRKV False True SVYGKLRKV 34.830585 350.553363025188 731112.0 6569.0 ENST00000530831.1_1_11:71208417-71209628:+|nuORF;;ENST00000531236.1_1_11:71196518-71209628:+|nuORF;;ENSG00000172890|ENST00000319023|NADSYN1;;nc|ENSG00000172890|Q6IA69-2|NADSYN1 4.907805681228638 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6574 34.835 25.0 1959800.0 25 0 322330.0 + 4339 DASLQPRNV 9 67 500.2650106665505 998.515468399901 2 500.2647888064384 MULTI CID FTMS 0 0 0 6573 2163656.75 0.2955449031110489 6 -0.1215248107910156 1 Unmodified _DASLQPRNV_ ENSG00000124226|ENST00000244061|RNF114;nc|ENSG00000124226|Q9Y508-2|RNF114 49.93300154707207 0.0405168250806675 4 {[DA]|[EG]}S{I|L}{I|L}{I|L}{I|L}S 8 5 63.665 0.0 0.0 6.376 0.0 0.0 0.0 183.0416658990844 183.0416658990844 45.13541628787123 0.0 0.0 0.0 0 0.0 2.0 1.305462187404089 0.0 {[DA]|[EG]}S{I|L}{I|L}{I|L}{I|L}S 6.376 - 165 + 1 2.23 44761.8 1.0 2287 4285 6573 HBL1_DMSO_200M_050219_2,6574 HBL1_DMSO_200M_050219_2,6574,DASLQPRNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6575 34.837 80.0 353560.0 25 0 30647.0 -1 0 56 422.123007315197 842.2314616971942 2 422.1228210330009 MULTI CID FTMS 0 0 0 6573 843000.0625 1.0 0 0.0 2 4 Q 1 -1 5.4846 0.0 0.0 0.65119 0.0 0.0 408.140807255591 303.01892763886536 711.1597348944564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.65119 - 2 + 1 2.23 30257.9 1.0 2288 4285 6573 HBL1_DMSO_200M_050219_2,6575 HBL1_DMSO_200M_050219_2,6575, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6577 34.853 800.0 257310.0 25 0 13366.0 -1 0 124 620.3133180947808 619.3060416281808 1 620.3132812380791 MULTI CID FTMS 0 0 0 6576 202598.578125 0.4311188794447975 11 -0.2276954650878906 1 4 PPPQN 5 -1 35.015 0.0 0.0 5.6539 0.0 0.0 68.03478823560268 0.0 68.03478823560268 0.0 13.819559887630437 0.0 0.0 0 0.0 0.0 0.0 1.236346736360778 PPPQN 5.6539 - 346 + 1 2.23 151424.9 0.8600000143051147 2289 4286 6576 HBL1_DMSO_200M_050219_2,6577 HBL1_DMSO_200M_050219_2,6577, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6578 34.855 80.0 687760.0 25 0 42030.0 + 25380 NAYRQVQEV 9 84 553.7834520756633 1105.5523512181264 2 553.7834960818291 MULTI CID FTMS 0 0 0 6576 826712.125 0.610941884793104 -6 0.1604232788085937 2 Unmodified _NAYRQVQEV_ ENSG00000126391|ENST00000317568|FRMD8;nc|ENSG00000126391|Q9BZ67-2|FRMD8;nc|ENSG00000126391|Q9BZ67-3|FRMD8 75.76082778847304 0.0188720312721366 4 {[QG]|[NA]}YRQVQEV 9 0 + 90.939 0.0 0.0 8.2256 8.2256 92.237 0.0 0.0 0.0 24.76203644159419 77.22865638833312 24.76203644159419 9.208187539523747 0 1.610924374808178 2.0 0.0 0.6747425010840047 + + {[QG]|[NA]}YRQVQEV;{[QG]|[NA]}YRQV[AG]EV;{[QG]|[NA]}YR[AG]VQEV;{[QG]|[NA]}YR{[VA]|[{I|L}G]}GQEV;{[QG]|[NA]}YR[AG]V[AG]EV;{[QG]|[NA]}YR{[VA]|[{I|L}G]}G[AG]EV;{NN|[MP]|[D{I|L}]|[EV]}Q[Y{I|L}]VQEV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[Y{I|L}]VQEV;{[QG]|[NA]}YRQV[TA][PS];{[QG]|[NA]}YR{[VA]|[{I|L}G]}E{[QG]|[NA]}V 8.2256;7.3927;7.3927;7.2773;6.5638;6.4483;5.2958;4.9842;4.6006;4.5752 +;-;-;-;-;-;-;-;-;- + 408 1 2.23 48525.9 1.0 2290 4286 6576 HBL1_DMSO_200M_050219_2,6578 HBL1_DMSO_200M_050219_2,6578,NAYRQVQEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6579 34.862 396.0 293630.0 25 0 28125.0 2765 ATNIGIPHT 9 114 462.2513279848805 922.4881030365608 2 462.2506896853447 MULTI CID FTMS 0 0 0 6576 199938.03125 0.8398757176271303 -5 0.1378173828125 3 Unmodified _ATNIGIPHT_ ENSG00000083168|ENST00000265713|KAT6A 27.628801355627647 0.1796483985696185 4 [TA]N{I|L}[PA]H{[TV]|[{I|L}S]} 9 3 + 57.296 0.0 0.0 6.211 6.211 80.045 0.0 0.0 0.0 13.310384486277798 3.9524249272868417 3.9524249272868417 3.9524249272868417 0 1.1643943297944483 2.0 1.1549471895720984 0.0 [TA]N{I|L}[PA]H{[TV]|[{I|L}S]};[TA]N{I|L}[VS][YR];[TA]N{I|L}[PA]{[TV]|[{I|L}S]}H;[TA]GG{I|L}[PA]H{[TV]|[{I|L}S]};[TA]GG{I|L}[VS][YR];{[QV]|[N{I|L}]|[RA]|[KV]}Q[PA]{I|L}N[PG];{[QV]|[N{I|L}]|[RA]|[KV]}[AG][PA]{I|L}N[PG];{[QV]|[N{I|L}]|[RA]|[KV]}Q[PA]{I|L}GG[PG];[HT]V[VS]{I|L}N[PG];[HT]V[VS]{I|L}GG[PG] 6.211;5.7826;5.7567;5.2129;4.7786;4.7682;3.77;3.77;3.6641;2.666 -;-;-;-;-;-;-;-;-;- 225 + 1 2.23 91199.8 1.0 2291 4286 6576 HBL1_DMSO_200M_050219_2,6579 HBL1_DMSO_200M_050219_2,6579,ATNIGIPHT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6580 34.876 800.0 47391.0 25 0 15638.0 -1 0 33 1108.423300710615 3322.2480727320453 3 1108.757861316204 MULTI CID FTMS 0 0 0 6576 135640.78125 1.0 0 0.0 4 4 V 1 -1 2.4743 0.0 0.0 0.074475 0.0 0.0 2213.8107691205205 1006.3588350885374 3220.169604209058 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.074475 - 4 + 1 2.23 40224.1 0.5699999928474426 2292 4286 6576 HBL1_DMSO_200M_050219_2,6580 HBL1_DMSO_200M_050219_2,6580, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6582 34.881 62.0 920600.0 25 0 219280.0 + 5750 DPNPQSTVV 9 82 478.7379517724085 955.461350611617 2 478.7379333376884 MULTI CID FTMS 0 0 0 6581 1039161.6875 0.8567373526462232 -1 0.0390281677246093 1 Unmodified _DPNPQSTVV_ ENSG00000181222|ENST00000674977|POLR2A;ENST00000573603.1_1_17:7412268-7412987:+|nuORF;nc|ENSG00000181222|P24928|POLR2A 27.628801355627647 0.1796483985696185 4 [QP]NPDSTVV 9 2 + 30.846 0.0 0.0 3.2284 3.2284 71.598 0.0 0.0 0.0 6.020599913279625 4.766872691037193 4.766872691037193 6.020599913279625 0 0.0629529932484498 0.0 0.9247425010840048 0.2887254899964357 [QP]NPDSTVV;[NP]QPDSTVV;[QP]GGPDSTVV;[QP]YYSTVV;[QP]SYYTVV;[HA]{NN|[MP]|[D{I|L}]|[EV]}DSTVV;[NP][AG]PDSTVV;[NP]D[QP]STVV;YY[QP]STVV;[NP]TYYTVV 3.2284;2.5983;2.2647;2.1468;2.0934;1.6639;1.6346;1.5646;1.5167;1.4633 -;-;-;-;-;-;-;-;-;- 214 1 2.23 48893.1 1.0 2293 4287 6581 HBL1_DMSO_200M_050219_2,6582 HBL1_DMSO_200M_050219_2,6582,DPNPQSTVV False True DPNPQSTVV 34.880499 478.737933337688 25991036.0 6581.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A;;ENST00000573603.1_1_17:7412268-7412987:+|nuORF 1.2522135376930237 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6583 34.884 190.0 328760.0 25 0 55916.0 + 6132 DSYPRNPTV 9 92 524.7565015837678 1047.4984502343357 2 524.7570678591728 MULTI CID FTMS 0 0 0 6581 341249.3125 0.0486983754260581 12 -0.1965560913085937 2 Unmodified _DSYPRNPTV_ ENSG00000057252|ENST00000367619|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;nc|ENSG00000057252|P35610-3|SOAT1 41.95555342248728 0.0647214845423414 4 {[DS]|[MA]|[CV]|TT}YPRNTPV 9 2 + 30.824 0.0 0.0 2.9426 2.9426 73.18 0.0 0.0 0.0 16.21986649107271 12.587418566968154 12.587418566968154 8.45098040014257 0 1.0924778212679485 0.0 0.4247425010840047 0.0 {[DS]|[MA]|[CV]|TT}YPRNTPV;{[DS]|[MA]|[CV]|TT}YPRNPTV 2.9426;2.1358 -;+ + 128 + 1 2.23 54931.9 1.0 2294 4287 6581 HBL1_DMSO_200M_050219_2,6583 HBL1_DMSO_200M_050219_2,6583,DSYPRNPTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6584 34.889 261.0 393630.0 25 0 50517.0 + 36165 SVVGKINKV 9 117 472.3007016466455 942.586850360091 2 472.3004333376884 MULTI CID FTMS 0 0 0 6581 227897.4375 0.1088427814252141 -11 0.2876853942871094 3 Unmodified _SVVGKINKV_ ENSG00000169231|ENST00000368378|THBS3;ENST00000486260.5_1_1:155170782-155176189:-|nuORF;nc|ENSG00000169231|P49746-2|THBS3 37.97399986684836 0.0865783450051559 4 VSVG[K{I|L}]NKV 9 2 + 65.276 0.0 0.0 6.9252 6.9252 89.159 0.0 0.0 0.0 49.31540340012745 12.36880000633434 12.36880000633434 9.208187539523747 0 0.6989700043360187 2.0 0.0 0.3494850021680094 VSVG[K{I|L}]NKV;VSVG[K{I|L}]GGKV 6.9252;5.9483 -;- 544 + 1 2.23 80317.6 1.0 2295 4287 6581 HBL1_DMSO_200M_050219_2,6584 HBL1_DMSO_200M_050219_2,6584,SVVGKINKV True True SVVGKINKV 34.888988 472.300433337688 30959863.5 6581.0 ENST00000486260.5_1_1:155170782-155176189:-|nuORF;;nc|ENSG00000169231|P49746-2|THBS3;;ENSG00000169231|ENST00000368378|THBS3 4.412175973256429 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6585 34.893 191.0 330210.0 25 0 41865.0 + 36392 SYQKPKEV 8 91 489.7664181712971 0 489.7661926150322 PEAK CID FTMS 0 0 0 6581 181500.8125 0.812458650718973 -2 0.0453376770019531 4 Unmodified _SYQKPKEV_ ENSG00000166171|ENST00000370151|DPCD 16.942295170755138 0.4635191396245973 4 P 1 7 8.2268 0.0 0.0 0.8416 0.0 0.0 250.09435936468643 627.3507174127561 877.4450767774426 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 + P 0.8416 + + 125 + 1 2.23 54270.6 1.0 2296 4287 6581 HBL1_DMSO_200M_050219_2,6585 HBL1_DMSO_200M_050219_2,6585,SYQKPKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6586 34.906 800.0 106860.0 25 0 8450.7 + 45394 YTAQQFRNA 9 106 549.7699661396975 1097.525379346195 2 549.7704955935478 MULTI CID FTMS 0 0 0 6581 108398.546875 1.0 0 0.0 5 Unmodified _YTAQQFRNA_ ENSG00000126768|ENST00000696123|TIMM17B;ENST00000466995.5_1_X:48751014-48751375:-|nuORF;ENST00000472645.1_1_X:48751014-48754386:-|nuORF;nc|ENSG00000126768|O60830-2|TIMM17B 49.93300154707207 0.0405168250806675 4 YTAQQ{M(Oxidation (M))|F}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 9 2 + 91.225 0.0 0.0 8.3119 8.3119 92.395 0.0 0.0 0.0 73.28009063929706 14.678477052876817 14.678477052876817 9.208187539523747 0 0.3494850021680094 2.0 0.7302046884880937 1.5356668758921828 YTAQQ{M(Oxidation (M))|F}{I|L}{NN|[MP]|[D{I|L}]|[EV]};YTAQ[AG]{M(Oxidation (M))|F}{I|L}{NN|[MP]|[D{I|L}]|[EV]};YTA[AG]Q{M(Oxidation (M))|F}{I|L}{NN|[MP]|[D{I|L}]|[EV]};YTAQQ{M(Oxidation (M))|F}R{[QG]|[NA]};YTA[AG][AG]{M(Oxidation (M))|F}{I|L}{NN|[MP]|[D{I|L}]|[EV]};YTAQQ{I|L}{I|L}{[{M(Oxidation (M))|F}D]|MM};YTA{[NV]|[RG]}[CS]{I|L}{NN|[MP]|[D{I|L}]|[EV]};YTA[AG]Q{M(Oxidation (M))|F}R{[QG]|[NA]};YTAQ[AG]{M(Oxidation (M))|F}R{[QG]|[NA]};YTA[AG]Q{I|L}{I|L}{[{M(Oxidation (M))|F}D]|MM} 8.3119;7.4729;7.4729;6.7988;6.6379;6.3043;5.9818;5.9598;5.9598;5.4653 -;-;-;+;-;-;-;-;-;- + 536 + 1 2.23 69585.3 0.5600000023841858 2297 4287 6581 HBL1_DMSO_200M_050219_2,6586 HBL1_DMSO_200M_050219_2,6586,YTAQQFRNA True True YTAQQFRNA 34.90649 549.770495593548 810291.3125 6581.0 ENST00000466995.5_1_X:48751014-48751375:-|nuORF;;ENSG00000126768|ENST00000696123|TIMM17B;;nc|ENSG00000126768|O60830-2|TIMM17B;;ENST00000472645.1_1_X:48751014-48754386:-|nuORF 8.477732340494791 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6587 34.92 800.0 119960.0 25 0 9552.1 + + -1 KVLNDINQA 9 142 507.2822229417045 1012.5498929502088 2 507.7805358767509 MULTI CID FTMS 0 0 0 6581 89227.203125 1.0 0 0.0 6 Carbamidomethyl (C) _IGC(Carbamidomethyl (C))LQRAVP_ ENSG00000005469|ENST00000331536|CROT;ENST00000479014.1_1_7:87005212-87011518:+|nuORF;nc|ENSG00000005469|Q9UKG9-3|CROT 18.13498045792455 0.3457906370836843 4 GV{I|L}[DN]{I|L}N[TP] 9 -1 21.545 0.0 0.0 2.1278 0.0 0.0 71.07429701972812 0.0 71.07429701972812 0.0 10.659938603434014 0.0 0.0 0 0.3807196863200844 0.0 0.25 0.3054621874040891 GV{I|L}[DN]{I|L}N[TP] 2.1278 - 333 1 2.23 77093.9 0.4900000095367431 2298 4287 6581 HBL1_DMSO_200M_050219_2,6587 HBL1_DMSO_200M_050219_2,6587,IGCLQRAVP False False KVLNDINQA 34.920311 507.780535876751 1013327.0 6581.0 ENSG00000005469|ENST00000331536|CROT;;ENST00000479014.1_1_7:87005212-87011518:+|nuORF;;nc|ENSG00000005469|Q9UKG9-3|CROT 3.241426706314087 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6589 34.925 16.0 3230300.0 25 0 382070.0 + -1 SPCISSAPV 9 87 459.2232357151393 916.4319184970786 2 459.2236816287041 MULTI CID FTMS 0 0 0 6588 1748391.75 0.5315901862406304 8 -0.1404266357421875 1 Carbamidomethyl (C) _SPC(Carbamidomethyl (C))ISSAPV_ REV__ENSG00000064655|ENST00000327619|EYA2;REV__nc|ENSG00000064655|O00167-2|EYA2;REV__nc|ENSG00000064655|O00167-3|EYA2 23.1484247019978 0.2366544122328345 4 [DP]P 3 -1 31.695 0.0 0.0 3.4585 0.0 0.0 0.0 604.2755518801442 604.2755518801442 12.86507189255381 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 [DP]P 3.4585 - 155 1 2.23 42778.4 1.0 2299 4288 6588 HBL1_DMSO_200M_050219_2,6589 HBL1_DMSO_200M_050219_2,6589,SPCISSAPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6590 34.926 19.0 3284900.0 25 0 423500.0 + 3295 AYIENAKQV 9 96 518.2769556217038 1034.5393583102075 2 518.2772704958916 MULTI CID FTMS 0 0 0 6588 3407196.5 0.2639446660727028 -14 0.4324836730957031 2 Unmodified _AYIENAKQV_ ENSG00000121022|ENST00000357849|COPS5;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 71.13359017698441 0.0206607516130725 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAKQV 9 0 + 75.288 0.0 0.0 7.2775 7.2775 90.152 0.0 0.0 0.0 39.397737521010825 12.72083661503494 12.72083661503494 9.208187539523747 0 0.4247425010840047 2.0 0.3807196863200844 1.341129063296272 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAKQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EGGAKQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAK[AG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}E[KQ]GQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EGGAK[AG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}E[KQ]G[AG]V;D[HV]QRP{[{M(Oxidation (M))|F}H]|[RQ]};D[H{I|L}]NRP{[{M(Oxidation (M))|F}H]|[RQ]};D[HV][AG]RP{[{M(Oxidation (M))|F}H]|[RQ]} 7.2775;6.3874;6.1347;5.5858;5.2488;4.443;0.91143;0.74122;0.016141 +;-;-;-;-;-;-;-;- + 1564 + 1 2.23 54992.5 1.0 2300 4288 6588 HBL1_DMSO_200M_050219_2,6590 HBL1_DMSO_200M_050219_2,6590,AYIENAKQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6592 34.931 18.0 3029900.0 25 0 419690.0 + 5785 DPPPGSHVI 9 69 459.7377035282235 917.460854123247 2 459.7391235232353 MULTI CID FTMS 0 0 0 6591 2540575.5 0.2587367524201682 -19 0.5368804931640625 1 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 34.10243960390752 0.1078313939113124 4 [DP]PP[SG]H{I|L}V 9 2 + 43.07 0.0 0.0 4.6945 4.6945 84.67 0.0 0.0 0.0 26.62971259689116 1.1194126402513405 1.1194126402513405 28.69911285071794 0 0.9247425010840048 2.0 0.0 0.0 [DP]PP[SG]H{I|L}V;[DP][KQ]{[TV]|[{I|L}S]}[KC] 4.6945;1.5664 -;- 108 + 1 2.23 49819.9 1.0 2301 4289 6591 HBL1_DMSO_200M_050219_2,6592 HBL1_DMSO_200M_050219_2,6592,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6593 34.936 292.0 319470.0 25 0 41625.0 32673 SDDCSSSE 8 108 415.12848256859854 828.2424122039971 2 415.1281310915947 MULTI CID FTMS 0 0 0 6591 297460.0 1.0 0 0.0 2 Unmodified _SDDCSSSE_ ENSG00000250423|ENST00000691062|KIAA1210;nc|ENSG00000250423|Q9ULL0|KIAA1210 2.577480529830294 0.808687252328423 4 {I|L} 1 8 9.7539 0.0 0.0 1.1777 0.0 0.0 697.1475005602456 0.0 697.1475005602456 0.0 0.4216044285001796 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1777 - 30 + 1 2.23 77096.5 1.0 2302 4289 6591 HBL1_DMSO_200M_050219_2,6593 HBL1_DMSO_200M_050219_2,6593,SDDCSSSE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6595 34.945 373.0 196890.0 25 0 9936.4 -1 0 89 694.3152122781553 2079.923807434666 3 694.6503784060478 MULTI CID FTMS 0 0 0 6594 256388.65625 0.8730215075971917 -4 0.0990676879882812 1 4 HGWTG[PS]{[SA]|[TG]} 9 -1 44.587 0.0 0.0 2.1437 0.0 0.0 1181.543748924025 0.0 1181.543748924025 0.0 33.61818737241734 0.0 0.0 0 0.9247425010840048 0.0 1.424742501084005 0.0 HGWTG[PS]{[SA]|[TG]} 2.1437 - 303 1 2.23 60031.2 1.0 2303 4290 6594 HBL1_DMSO_200M_050219_2,6595 HBL1_DMSO_200M_050219_2,6595, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6596 34.952 398.0 235680.0 25 0 31804.0 + 43761 YEHDDYEIV 9 131 394.8354139630869 1181.4844124894607 3 394.8355590701103 MULTI CID FTMS 0 0 0 6594 154987.828125 0.444866009020546 -9 0.2368850708007812 2 Unmodified _YEHDDYEIV_ REV__ENSG00000113360|ENST00000344624|DROSHA;REV__nc|ENSG00000113360|Q9NRR4-2|DROSHA;REV__nc|ENSG00000113360|Q9NRR4-3|DROSHA;REV__nc|ENSG00000113360|Q9NRR4-4|DROSHA 5.296884461304476 0.7297726132274777 4 {[VA]|[{I|L}G]}[C(Carbamidomethyl (C))Q]VD 6 -1 23.377 0.0 0.0 1.9786 0.0 0.0 0.0 506.17310812838576 506.17310812838576 8.940162615404077 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[VA]|[{I|L}G]}[C(Carbamidomethyl (C))Q]VD 1.9786 - 386 1 2.23 82682.4 1.0 2304 4290 6594 HBL1_DMSO_200M_050219_2,6596 HBL1_DMSO_200M_050219_2,6596,YEHDDYEIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6599 34.96 36.0 1526300.0 25 0 238020.0 + 3196 AVVTQVNKV 9 76 479.2901554415722 956.5657579499444 2 479.2900573611259 MULTI CID FTMS 0 0 0 6598 1581592.125 0.1040801808987831 -11 0.2567787170410156 1 Unmodified _AVVTQVNKV_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 58.6788170122104 0.0268135626297836 4 {[VA]|[{I|L}G]}VTQVNKV 9 0 + 83.427 0.0 0.0 8.7215 8.7215 92.974 0.0 0.0 0.0 51.43221177763565 14.09256854528806 14.09256854528806 9.208187539523747 0 1.0356668758921828 2.0 0.0 0.9247425010840048 + + {[VA]|[{I|L}G]}VTQVNKV;{[VA]|[{I|L}G]}VTQVGGKV;{[VA]|[{I|L}G]}VT[AG]VNKV;{[VA]|[{I|L}G]}VT[AG]VGGKV;{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]{I|L}V[NP];{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]{I|L}[NP]V 8.7215;7.7588;7.7588;6.8008;4.4591;4.4591 +;-;-;-;-;- + 333 + 1 2.23 46121.6 1.0 2305 4292 6598 HBL1_DMSO_200M_050219_2,6599 HBL1_DMSO_200M_050219_2,6599,AVVTQVNKV True True AVVTQVNKV 34.960434 479.290057361126 286601808.0 6598.0 ENST00000526368.1_1_11:62530297-62533976:+|nuORF;;ENSG00000168002|ENST00000301788|POLR2G;;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 8.47162357966105 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6600 34.974 800.0 171890.0 25 0 23849.0 11915 GLYLMSGSHDC 11 129 591.74950498439 1181.48445703558 2 591.7493163943291 MULTI CID FTMS 0 0 0 6598 196098.453125 0.6918989452625686 -2 0.0198936462402343 2 Unmodified _GLYLMSGSHDC_ ENSG00000115808|ENST00000263918|STRN;nc|ENSG00000115808|O43815-2|STRN 19.256988751693697 0.6345794173041263 4 {[VA]|[{I|L}G]}YEGHCEV 9 7 71.041 0.0 0.0 6.0129 0.0 0.0 0.0 191.05803857974848 191.05803857974848 44.55767843264759 0.0 0.0 0.0 0 1.0228787452803376 2.0 0.8494850021680094 0.0 {[VA]|[{I|L}G]}YEGHCEV 6.0129 - 2608 + 1 2.23 108140.1 0.9800000190734864 2306 4292 6598 HBL1_DMSO_200M_050219_2,6600 HBL1_DMSO_200M_050219_2,6600,GLYLMSGSHDC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6601 34.98 303.0 492270.0 25 0 58677.0 + 31962 RVEEAIHPV 9 132 525.2902910902392 1048.5660292472785 2 525.2902099490166 MULTI CID FTMS 0 0 0 6598 197084.046875 0.0949875478402651 -11 0.2567787170410156 3 Unmodified _RVEEAIHPV_ ENST00000367590.8_1_1:180601192-180601402:+|nuORF 31.26834338654808 0.1333407332142048 4 [{I|L}T]H{I|L}EA 6 8 33.21 0.0 0.0 3.1672 0.0 0.0 0.0 381.1898897760376 381.1898897760376 15.097543361717708 0.0 0.0 0.0 0 1.16944517631652 0.0 0.0 0.0 [{I|L}T]H{I|L}EA 3.1672 - 608 + 1 2.23 120839.3 1.0 2307 4292 6598 HBL1_DMSO_200M_050219_2,6601 HBL1_DMSO_200M_050219_2,6601,RVEEAIHPV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6602 34.994 800.0 50899.0 25 0 3381.9 19179 LEEMLIVVDEN 11 81 652.3246929518721 1302.634832970544 2 652.8261596560478 MULTI CID FTMS 0 0 0 6598 110641.6875 0.5748741881126804 -4 0.0355606079101562 4 Unmodified _LEEMLIVVDEN_ ENSG00000148377|ENST00000277517|IDI2 4.897010918128616 0.8520435188433833 4 EP[H{I|L}]{[{M(Oxidation (M))|F}C]|[YS]} 6 9 12.197 0.0 0.0 0.9363 0.0 0.0 558.3133412091812 0.0 558.3133412091812 0.0 8.217196696094435 0.0 0.0 0 0.8494850021680094 0.0 0.2302046884880938 0.0 EP[H{I|L}]{[{M(Oxidation (M))|F}C]|[YS]} 0.9363 - 42 1 2.23 37511.0 0.699999988079071 2308 4292 6598 HBL1_DMSO_200M_050219_2,6602 HBL1_DMSO_200M_050219_2,6602,LEEMLIVVDEN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6603 35.007 800.0 77219.0 25 0 5040.4 8821 EYISTVAFEAG 11 102 593.7853786821539 1185.5562044311075 2 593.7850829958916 MULTI CID FTMS 0 0 0 6598 103346.0390625 0.7306484090356251 -9 0.1731300354003906 5 Unmodified _EYISTVAFEAG_ ENST00000418271.1_1_22:27619498-27620502:-|nuORF 8.155526934196011 0.8366696279279818 4 P{I|L} 2 10 12.078 0.0 0.0 1.0188 0.0 0.0 383.1206098039577 589.2623995416624 972.3830093456202 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 P{I|L} 1.0188 - 68 + 1 2.23 52283.8 0.699999988079071 2309 4292 6598 HBL1_DMSO_200M_050219_2,6603 HBL1_DMSO_200M_050219_2,6603,EYISTVAFEAG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6605 35.012 57.0 695430.0 25 0 79573.0 + 3751 DAGGHNVTI 9 67 442.21706766673975 882.4195824002795 2 442.2169982790947 MULTI CID FTMS 0 0 0 6604 935040.5625 0.767468040908376 2 -0.0372543334960937 1 Unmodified _DAGGHNVTI_ ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1 24.020572477871973 0.2255576514309169 4 {[DA]|[EG]}[HN]NVT{I|L} 8 2 + 43.887 0.0 0.0 4.9735 4.9735 82.024 0.0 0.0 0.0 17.064856298445576 14.93501263708417 14.93501263708417 9.262137858390808 0 0.6989700043360187 2.0 0.3252574989159953 0.0 {[DA]|[EG]}[HN]NVT{I|L};{[DA]|[EG]}[HN]GGVT{I|L};[HN]{[DA]|[EG]}NVT{I|L};[HN]N{[DA]|[EG]}VT{I|L};[HN]NV{[DA]|[EG]}T{I|L};[HN]{[DA]|[EG]}GGVT{I|L};[HN]GG{[DA]|[EG]}VT{I|L};[HN]GGV{[DA]|[EG]}T{I|L} 4.9735;3.9239;2.5075;2.48;2.48;1.4579;1.4304;1.4304 -;-;-;-;-;-;-;- 105 1 2.221 40782.1 1.0 2310 4293 6604 HBL1_DMSO_200M_050219_2,6605 HBL1_DMSO_200M_050219_2,6605,DAGGHNVTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6606 35.015 128.0 432970.0 25 0 57946.0 + 6453 EAFGNAKTV 9 88 468.7427304142523 935.4709078953048 2 468.7432739138603 MULTI CID FTMS 0 0 0 6604 401362.625 0.82912318488145 5 -0.0611419677734375 2 Unmodified _EAFGNAKTV_ ENSG00000006788|ENST00000252172|MYH13;ENSG00000092054|ENST00000355349|MYH7;ENSG00000100345|ENST00000216181|MYH9;ENSG00000105357|ENST00000642316|MYH14;ENSG00000109061|ENST00000226207|MYH1;ENSG00000109063|ENST00000583535|MYH3;ENSG00000125414|ENST00000245503|MYH2;ENSG00000128641|ENST00000392318|MYO1B;ENSG00000133020|ENST00000403437|MYH8;ENSG00000133392|ENST00000300036|MYH11;ENSG00000142347|ENST00000644032|MYO1F;ENSG00000145555|ENST00000513610|MYO10;ENSG00000157483|ENST00000288235|MYO1E;ENSG00000196586|ENST00000369977|MYO6;ENSG00000197616|ENST00000405093|MYH6;ENSG00000264424|ENST00000255381|MYH4;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;ENST00000557461.1_1_14:23869380-23876432:-|nuORF;ENST00000594977.5_1_19:8612968-8642307:-|nuORF;ENST00000595325.5_1_19:8616850-8642307:-|nuORF;ENST00000598529.5_1_19:8616563-8619410:-|nuORF;nc|ENSG00000100345|P35579-2|MYH9;nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000125414|Q9UKX2-2|MYH2;nc|ENSG00000128641|O43795-2|MYO1B;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54|MYO6 47.74868867922204 0.0453060283459952 4 GNAKTV 6 3 31.534 0.0 0.0 3.3709 0.0 0.0 347.1480049954316 0.0 347.1480049954316 0.0 13.44212497064703 0.0 0.0 0 0.0 0.0 0.816901560044258 0.0 + GNAKTV 3.3709 + + 243 + 1 2.221 49803.3 1.0 2311 4293 6604 HBL1_DMSO_200M_050219_2,6606 HBL1_DMSO_200M_050219_2,6606,EAFGNAKTV True True EAFGNAKTV 35.015102 468.74327391386 3396558.5 6604.0 ENSG00000197616|ENST00000405093|MYH6;;nc|ENSG00000125414|Q9UKX2-2|MYH2;;ENST00000595325.5_1_19:8616850-8642307:-|nuORF;;nc|ENSG00000196586|Q9UM54-2|MYO6;;nc|ENSG00000133392|P35749-4|MYH11;;nc|ENSG00000105357|Q7Z406-5|MYH14;;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;;ENSG00000100345|ENST00000216181|MYH9;;nc|ENSG00000128641|O43795-2|MYO1B;;ENSG00000142347|ENST00000644032|MYO1F;;ENST00000557461.1_1_14:23869380-23876432:-|nuORF;;ENSG00000264424|ENST00000255381|MYH4;;nc|ENSG00000196586|Q9UM54-5|MYO6;;ENSG00000109061|ENST00000226207|MYH1;;ENSG00000133020|ENST00000403437|MYH8;;nc|ENSG00000196586|Q9UM54-6|MYO6;;ENSG00000196586|ENST00000369977|MYO6;;ENSG00000125414|ENST00000245503|MYH2;;nc|ENSG00000196586|Q9UM54|MYO6;;ENSG00000109063|ENST00000583535|MYH3;;ENSG00000105357|ENST00000642316|MYH14;;nc|ENSG00000105357|Q7Z406-6|MYH14;;ENST00000594977.5_1_19:8612968-8642307:-|nuORF;;ENST00000598529.5_1_19:8616563-8619410:-|nuORF;;nc|ENSG00000133392|P35749-3|MYH11;;ENSG00000006788|ENST00000252172|MYH13;;nc|ENSG00000196586|Q9UM54-4|MYO6;;ENSG00000092054|ENST00000355349|MYH7;;nc|ENSG00000100345|P35579-2|MYH9;;nc|ENSG00000105357|Q7Z406-4|MYH14;;ENSG00000128641|ENST00000392318|MYO1B;;nc|ENSG00000133392|P35749-2|MYH11;;ENSG00000157483|ENST00000288235|MYO1E;;ENSG00000145555|ENST00000513610|MYO10;;nc|ENSG00000105357|Q7Z406|MYH14;;ENSG00000133392|ENST00000300036|MYH11 7.033028920491536 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6607 35.017 95.0 904510.0 25 0 117130.0 + 36167 SVVGKINKV 9 98 315.2030047919588 942.5871849760764 3 315.2024719119072 MULTI CID FTMS 0 0 0 6604 528801.1875 0.5983631895441699 -8 0.1768150329589843 3 Unmodified _SVVGKINKV_ ENSG00000169231|ENST00000368378|THBS3;ENST00000486260.5_1_1:155170782-155176189:-|nuORF;nc|ENSG00000169231|P49746-2|THBS3 30.63653989081413 0.1413794767160703 4 [VS]VGK{I|L}NKV 9 0 + 54.024 0.0 0.0 5.7315 5.7315 84.59 0.0 0.0 0.0 42.91501874674325 4.894549897933878 4.894549897933878 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + + [VS]VGK{I|L}NKV;[VS]VGK{I|L}GGKV;[VS]VV[KA]NKV;[VS]VV[KA]GGKV 5.7315;4.7546;3.8748;2.8979 +;-;-;- + 164 + 1 2.221 74054.7 1.0 2312 4293 6604 HBL1_DMSO_200M_050219_2,6607 HBL1_DMSO_200M_050219_2,6607,SVVGKINKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6608 35.021 208.0 435080.0 25 0 58055.0 + 5064 DGYEQAARV 9 115 504.7409398526873 1007.4673267721746 2 504.7412902712822 MULTI CID FTMS 0 0 0 6604 276466.53125 0.0009479325014559 56 -2.09014892578125 4 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 32.78568957990786 0.1150597335874693 4 [DG]YEQAARV 9 0 + 61.784 0.0 0.0 6.1326 6.1326 86.187 0.0 0.0 0.0 44.52926140126731 6.522949032151004 6.522949032151004 9.208187539523747 0 0.6549471895720985 0.8860566476931632 0.4247425010840047 0.3252574989159953 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YEQA{[NV]|[RG]}{I|L};[DG]YE[AG]A{[NV]|[RG]}{I|L};[DG]YEV[NG]RV;[DG]YV[DN]ARV;[DG]YE{[{M(Oxidation (M))|F}H]|[RQ]}K{I|L};[DG]YE{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}K;[DG]YEV[{I|L}P]C{I|L};[DG]YVE[NG]RV 6.1326;5.2186;5.2101;4.2961;4.2714;3.8568;3.7947;3.6644;3.5958;3.558 +;-;-;-;-;-;-;-;-;- + 500 + 1 2.221 75281.0 1.0 2313 4293 6604 HBL1_DMSO_200M_050219_2,6608 HBL1_DMSO_200M_050219_2,6608,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6610 35.03 363.0 303660.0 25 0 56635.0 11263 GETEFPEPLRQ 11 72 434.8819719445425 0 434.8821899294853 PEAK CID FTMS 0 0 0 6609 143270.046875 0.5907187921954856 85 -3.633583068847656 1 Unmodified _GETEFPEPLRQ_ ENST00000378883.5_1_20:5931372-5931489:+|nuORF 1.3295316138638542 0.4761840153648598 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.221 89597.3 1.0 2314 4294 6609 HBL1_DMSO_200M_050219_2,6610 HBL1_DMSO_200M_050219_2,6610,GETEFPEPLRQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6611 35.037 411.0 229790.0 25 0 28167.0 + 12008 GPPSHLQS 8 103 411.7090516182051 821.4035503032102 2 411.7089721560478 MULTI CID FTMS 0 0 0 6609 167301.046875 0.7518714158494503 -3 0.0688934326171875 2 Unmodified _GPPSHLQS_ REV__ENSG00000189050|ENST00000305783|RNFT1;REV__ENST00000477207.2_1_17:58039882-58042045:-|nuORF;REV__ENST00000586083.5_1_17:58037427-58042045:-|nuORF;REV__nc|ENSG00000189050|Q5M7Z0-2|RNFT1;REV__nc|ENSG00000189050|Q5M7Z0-3|RNFT1 16.942295170755138 0.6606234159769251 4 [RD]G{M(Oxidation (M))|F}{I|L}QS 7 -1 + 28.148 0.0 0.0 3.4268 3.4268 79.483 0.0 0.0 0.0 4.804544755026747 13.117956763885925 4.804544755026747 19.30100680816928 0 0.5172203223519531 0.0 0.0 0.0 [RD]G{M(Oxidation (M))|F}{I|L}QS;[AG][YR]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[AG]{I|L}[YR]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.4268;1.077;0.10112 -;-;- 73 1 2.221 82469.2 1.0 2315 4294 6609 HBL1_DMSO_200M_050219_2,6611 HBL1_DMSO_200M_050219_2,6611,GPPSHLQS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6612 35.045 426.0 311110.0 25 0 25148.0 + 3259 AYGPPTRAV 9 120 466.2535885521363 930.4926241710726 2 466.2534973025322 MULTI CID FTMS 0 0 0 6609 120536.4765625 0.0231422740555217 -20 0.5331916809082031 3 Unmodified _AYGPPTRAV_ ENSG00000084463|ENST00000261167|WBP11 22.736283301280096 0.2418982879461534 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5 4 46.224 0.0 0.0 4.9677 0.0 0.0 0.0 442.2424410455688 442.2424410455688 30.025749891599528 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 4.9677 + + 214 + 1 2.221 106294.1 1.0 2316 4294 6609 HBL1_DMSO_200M_050219_2,6612 HBL1_DMSO_200M_050219_2,6612,AYGPPTRAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6614 35.061 800.0 185300.0 25 0 43496.0 -1 0 68 1095.7766770004068 3284.3082016014205 3 1096.112353503704 MULTI CID FTMS 0 0 0 6613 362133.0625 0.1890523506736659 14 -0.4464035034179687 1 4 VTHTVKY 7 -1 23.651 0.0 0.0 0.72011 0.0 0.0 2165.766341510005 287.0540865533813 2452.8204280633863 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.6747425010840047 VTHTVKY 0.72011 - 395 + 1 2.221 126229.2 0.8299999833106995 2317 4295 6613 HBL1_DMSO_200M_050219_2,6614 HBL1_DMSO_200M_050219_2,6614, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6619 35.089 800.0 327990.0 25 0 70796.0 -1 0 137 388.2149460907335 387.20766962413353 1 388.2137939333916 MULTI CID FTMS 0 0 0 6618 143408.734375 0.0743306695047781 -18 0.3734016418457031 1 4 T 1 -1 12.656 0.0 0.0 3.2685 0.0 0.0 268.1490052337999 0.0 268.1490052337999 0.0 1.3966440259878432 0.0 0.0 0 0.0 0.0 0.2059771852360797 0.0 T 3.2685 - 16 + 1 2.207 205646.8 0.8799999952316284 2318 4299 6618 HBL1_DMSO_200M_050219_2,6619 HBL1_DMSO_200M_050219_2,6619, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6620 35.102 800.0 133520.0 25 0 6363.0 + -1 DPLGCLVVPS 10 130 528.7726812112588 1055.5308094893176 2 528.7726928591728 MULTI CID FTMS 0 0 0 6618 92421.3828125 1.0 0 0.0 2 Carbamidomethyl (C) _DPLGC(Carbamidomethyl (C))LVVPS_ REV__ENSG00000185504|ENST00000327787|FAAP100;REV__nc|ENSG00000185504|Q0VG06-3|FAAP100 13.042465956692816 0.6287021003332052 4 EEAPS 5 -1 32.218 0.0 0.0 3.0523 0.0 0.0 0.0 539.2954195611936 539.2954195611936 1.5937056182820406 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.0 0.0 EEAPS 3.0523 - 292 + 1 2.207 87341.7 0.7799999713897705 2319 4299 6618 HBL1_DMSO_200M_050219_2,6620 HBL1_DMSO_200M_050219_2,6620,DPLGCLVVPS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6622 35.108 181.0 363040.0 25 0 49532.0 -1 0 73 422.123007315197 842.2314616971942 2 422.1226684451103 MULTI CID FTMS 0 0 0 6621 385446.0 0.4572312828268622 15 -0.521087646484375 1 4 Q 1 -1 6.9897 0.0 0.0 0.8299 0.0 0.0 408.14152015078673 303.01910854979127 711.160628700578 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.8299 - 6 + 1 2.207 57678.3 1.0 2320 4300 6621 HBL1_DMSO_200M_050219_2,6622 HBL1_DMSO_200M_050219_2,6622, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6623 35.114 311.0 265430.0 25 0 26375.0 + 4340 DASLQPRNV 9 110 500.2650106665505 998.515468399901 2 500.2651550173759 MULTI CID FTMS 0 0 0 6621 232168.546875 0.0317130851238787 21 -0.7055587768554688 2 Unmodified _DASLQPRNV_ ENSG00000124226|ENST00000244061|RNF114;nc|ENSG00000124226|Q9Y508-2|RNF114 43.85829265575387 0.0542763391141878 4 {[DA]|[EG]}S{I|L}QV 6 3 58.148 0.0 0.0 5.8235 0.0 0.0 0.0 382.1855867975219 382.1855867975219 39.93623790491817 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.4247425010840047 {[DA]|[EG]}S{I|L}QV 5.8235 - 298 + 1 2.207 67746.6 1.0 2321 4300 6621 HBL1_DMSO_200M_050219_2,6623 HBL1_DMSO_200M_050219_2,6623,DASLQPRNV True True DASLQPRNV 35.113827 500.265155017376 211069504.0 6621.0 ENSG00000124226|ENST00000244061|RNF114;;nc|ENSG00000124226|Q9Y508-2|RNF114 6.67410405476888 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6624 35.116 113.0 816660.0 25 0 57671.0 + 30404 RAVEELHKL 9 105 365.5490498636207 1093.6253201910622 3 365.5487548708916 MULTI CID FTMS 0 0 0 6621 428941.09375 0.4770980930626153 -5 0.0576705932617187 3 Unmodified _RAVEELHKL_ ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR 38.61474834105838 0.0830609365873449 4 {[QV]|[N{I|L}]|[RA]|[KV]}VEE{I|L}HK{I|L} 9 0 + 72.626 0.0 0.0 6.6409 6.6409 92.977 0.0 0.0 0.0 10.642492736872596 48.356444972833 10.642492736872596 38.83417202263438 0 1.4517188504113845 0.0 0.0 0.3494850021680094 + + {[QV]|[N{I|L}]|[RA]|[KV]}VEE{I|L}HK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VET{I|L}[RH]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VTE{I|L}[RH]{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[RH]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}H[KQ][WR]{I|L} 6.6409;3.0899;2.3341;2.2873;1.014 +;-;-;-;- + 333 1 2.207 80124.7 1.0 2322 4300 6621 HBL1_DMSO_200M_050219_2,6624 HBL1_DMSO_200M_050219_2,6624,RAVEELHKL True True RAVEELHKL 35.116199 365.548754870892 12475231.0 6621.0 nc|ENSG00000047410|P12270-2|TPR;;ENSG00000047410|ENST00000367478|TPR 6.589122136433919 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6625 35.119 157.0 427830.0 25 0 50556.0 + 4550 DAYQTREI 8 100 498.24395396526336 994.4733549973269 2 498.2438537478447 MULTI CID FTMS 0 0 0 6621 270102.21875 0.785634635266263 -2 0.033782958984375 4 Unmodified _DAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 36.12702656103203 0.299085846329477 4 {[DA]|[EG]}YQ{I|L}{I|L}C(Carbamidomethyl (C)){I|L} 8 3 + 60.104 0.0 0.0 6.0438 6.0438 75.247 0.0 0.0 0.0 45.80706579873059 8.416375079047498 8.416375079047498 1.7339374311232802 0 0.805462187404089 1.6989700043360187 0.0 0.4247425010840047 {[DA]|[EG]}YQ{I|L}{I|L}C(Carbamidomethyl (C)){I|L};{[DA]|[EG]}YQTVW{I|L};{[DA]|[EG]}YQ{I|L}SW{I|L};{[DA]|[EG]}Y{I|L}Q{I|L}C(Carbamidomethyl (C)){I|L};{[DA]|[EG]}YQ{I|L}{I|L}[CG]{I|L};{[DA]|[EG]}Y{I|L}QSW{I|L};{[DA]|[EG]}Y{I|L}GA{I|L}C(Carbamidomethyl (C)){I|L};{[DA]|[EG]}Y[AG]{I|L}{I|L}C(Carbamidomethyl (C)){I|L};{[DA]|[EG]}Y[AG]TVW{I|L};{[DA]|[EG]}Y{I|L}GASW{I|L} 6.0438;5.8694;5.6924;5.194;5.1124;4.8426;4.8129;4.6853;4.511;4.4615 -;-;-;-;-;-;-;-;-;- 518 + 1 2.207 59152.2 1.0 2323 4300 6621 HBL1_DMSO_200M_050219_2,6625 HBL1_DMSO_200M_050219_2,6625,DAYQTREI False True DAYQTREI 35.119289 498.243853747845 2175622.0 6621.0 ENSG00000127914|ENST00000356239|AKAP9;;nc|ENSG00000127914|Q99996-3|AKAP9;;nc|ENSG00000127914|Q99996-6|AKAP9 5.444844484329224 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6626 35.127 437.0 237550.0 25 0 15380.0 -1 0 101 620.3133180947808 619.3060416281808 1 620.3134643435478 MULTI CID FTMS 0 0 0 6621 233914.546875 0.4977575769182737 25 -0.7915878295898438 5 4 PPPQN 5 -1 36.151 0.0 0.0 5.8374 0.0 0.0 68.0353868275392 0.0 68.0353868275392 0.0 18.761472389051853 0.0 0.0 0 0.0 0.0 0.0 1.173877368056628 PPPQN 5.8374 - 390 + 1 2.207 80084.9 1.0 2324 4300 6621 HBL1_DMSO_200M_050219_2,6626 HBL1_DMSO_200M_050219_2,6626, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6629 35.135 119.0 331310.0 25 0 19619.0 + 25381 NAYRQVQEV 9 79 553.7834520756633 1105.5523512181264 2 553.7834350466728 MULTI CID FTMS 0 0 0 6628 361355.9375 0.2670427478457862 10 -0.4334869384765625 1 Unmodified _NAYRQVQEV_ ENSG00000126391|ENST00000317568|FRMD8;nc|ENSG00000126391|Q9BZ67-2|FRMD8;nc|ENSG00000126391|Q9BZ67-3|FRMD8 47.74868867922204 0.0453060283459952 4 {[QG]|[NA]}YRQVQEV 9 0 + 60.045 0.0 0.0 5.4312 5.4312 83.333 0.0 0.0 0.0 21.75173648495437 43.73258109881903 21.75173648495437 9.208187539523747 0 1.1989700043360187 1.6989700043360187 0.0 0.3494850021680094 + + {[QG]|[NA]}YRQVQEV;{[QG]|[NA]}YR[AG]VQEV;{[QG]|[NA]}YRQV[AG]EV;{[QG]|[NA]}YR{[VA]|[{I|L}G]}GQEV;{[QG]|[NA]}YRQV[TA][PS];{[QG]|[NA]}YR[AG]V[AG]EV;{[QG]|[NA]}YR{[VA]|[{I|L}G]}G[AG]EV;{NN|[MP]|[D{I|L}]|[EV]}Q[Y{I|L}]VQEV;{[QG]|[NA]}YR[AG]V[TA][PS];{NN|[MP]|[D{I|L}]|[EV]}[Y{I|L}]QVQEV 5.4312;4.5983;4.5983;4.0537;3.9187;3.7693;3.2248;3.1457;3.0897;2.7142 +;-;-;-;-;-;-;-;-;- + 323 1 2.207 36604.6 1.0 2325 4302 6628 HBL1_DMSO_200M_050219_2,6629 HBL1_DMSO_200M_050219_2,6629,NAYRQVQEV True True NAYRQVQEV 35.135445 553.783435046673 19418796.0 6628.0 nc|ENSG00000126391|Q9BZ67-3|FRMD8;;ENSG00000126391|ENST00000317568|FRMD8;;nc|ENSG00000126391|Q9BZ67-2|FRMD8 7.576170126597087 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6630 35.138 134.0 440930.0 25 0 30405.0 29796 QQDIKVSMC 9 91 526.2488083095967 1050.483063685993 2 526.7507202029228 MULTI CID FTMS 0 0 0 6628 258221.578125 0.964979386243396 -2 0.0283126831054687 2 Unmodified _QQDIKVSMC_ ENSG00000100485|ENST00000216373|SOS2;nc|ENSG00000100485|Q07890-2|SOS2 14.838274106304384 0.4350285940865338 4 PVGQVNPV 8 8 27.495 0.0 0.0 2.6173 0.0 0.0 242.0406362820308 0.0 242.0406362820308 0.0 13.78797357861622 0.0 0.0 0 0.5 0.0 0.0 0.0 PVGQVNPV 2.6173 - 514 + 1 2.207 51940.5 1.0 2326 4302 6628 HBL1_DMSO_200M_050219_2,6630 HBL1_DMSO_200M_050219_2,6630,QQDIKVSMC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6631 35.152 800.0 159380.0 25 0 8575.9 15130 INKVNEHLK 9 139 547.818526371398 1093.622499809596 2 547.8190795779228 MULTI CID FTMS 0 0 0 6628 97933.7421875 0.8631765800245866 -1 0.0037040710449218 3 Unmodified _INKVNEHLK_ ENSG00000118200|ENST00000358823|CAMSAP2;nc|ENSG00000118200|Q08AD1-2|CAMSAP2;nc|ENSG00000118200|Q08AD1|CAMSAP2 20.41453444215458 0.284085796332423 4 {[QV]|[N{I|L}]|[RA]|[KV]}[RN]S{I|L}HK{I|L} 9 6 + 43.863 0.0 0.0 4.0108 4.0108 69.257 0.0 0.0 0.0 1.299858435346401 30.36790235686893 1.299858435346401 3.010299956639805 0 1.0 0.6575773191777937 0.0 0.2215141619232908 {[QV]|[N{I|L}]|[RA]|[KV]}[RN]S{I|L}HK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[QA]AS{I|L}HK{I|L};[KA]QQE{I|L}HK{I|L};[{I|L}T][WP]S{I|L}HK{I|L};{[VA]|[{I|L}G]}{[RE]|[WV]}E{I|L}HK{I|L};[Q{I|L}]{[QG]|[NA]}AS{I|L}HK{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]S{I|L}HK{I|L};{[VA]|[{I|L}G]}G[RN]S{I|L}HK{I|L};{NN|[MP]|[D{I|L}]|[EV]}VVAS{I|L}HK{I|L};{[VA]|[{I|L}G]}G[QA]AS{I|L}HK{I|L} 4.0108;3.7355;2.8052;2.7707;2.6323;2.53;2.5123;2.4039;2.237;2.1326 -;-;-;-;-;-;-;-;-;- 839 1 2.207 98562.4 0.7599999904632568 2327 4302 6628 HBL1_DMSO_200M_050219_2,6631 HBL1_DMSO_200M_050219_2,6631,INKVNEHLK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6632 35.166 800.0 291430.0 25 0 11419.0 + 26641 NYADHVREM 9 198 378.8385524766153 1133.493828030046 3 379.1728698611259 MULTI CID FTMS 0 0 0 6628 97760.65625 1.0 0 0.0 4 Unmodified _NYADHVREM_ ENSG00000180185|ENST00000427358|FAHD1;nc|ENSG00000180185|Q6P587-1|FAHD1;nc|ENSG00000180185|Q6P587-2|FAHD1;nc|ENSG00000180185|Q6P587-3|FAHD1 20.41453444215458 0.284085796332423 4 VGK{I|L}NKV 7 9 44.35 0.0 0.0 3.9127 0.0 0.0 377.0062148300764 0.0 377.0062148300764 0.0 -4.48454311781029 -4.48454311781029 0.0 0 0.0 0.0 0.0 1.4876954943324543 VGK{I|L}NKV 3.9127 - 1005 + 1 2.207 191714.8 0.6399999856948853 2328 4302 6628 HBL1_DMSO_200M_050219_2,6632 HBL1_DMSO_200M_050219_2,6632,NYADHVREM False True NYADHVREM 35.165831 378.8389 798129.4375 6628.0 nc|ENSG00000180185|Q6P587-2|FAHD1;;nc|ENSG00000180185|Q6P587-1|FAHD1;;nc|ENSG00000180185|Q6P587-3|FAHD1;;ENSG00000180185|ENST00000427358|FAHD1 3.634869575500488 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6634 35.17 36.0 1801700.0 25 0 355020.0 + 36166 SVVGKINKV 9 73 472.3007016466455 942.586850360091 2 472.3005859255791 MULTI CID FTMS 0 0 0 6633 1870822.0 0.8934960930900414 5 -0.2404747009277343 1 Unmodified _SVVGKINKV_ ENSG00000169231|ENST00000368378|THBS3;ENST00000486260.5_1_1:155170782-155176189:-|nuORF;nc|ENSG00000169231|P49746-2|THBS3 41.8396318013385 0.0653578398400075 4 SVV 3 6 54.253 0.0 0.0 5.7557 0.0 0.0 0.0 654.3955766964906 654.3955766964906 24.404374896105235 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + SVV 5.7557 + + 335 + 1 2.197 56569.4 1.0 2329 4303 6633 HBL1_DMSO_200M_050219_2,6634 HBL1_DMSO_200M_050219_2,6634,SVVGKINKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6635 35.184 800.0 188300.0 25 0 21991.0 + 36364 SYPTKQAAL 9 131 489.7664181712971 0 489.7668945193291 PEAK CID FTMS 0 0 0 6633 161541.78125 0.7231153173439072 14 -0.5076141357421875 2 Unmodified _SYPTKQAAL_ ENSG00000134294|ENST00000256689|SLC38A2;ENST00000553252.1_1_12:46764947-46766316:-|nuORF 18.1463463914782 0.2188250594445807 4 AAQKE 5 8 11.471 0.0 0.0 1.1735 0.0 0.0 381.1892072485391 66.03577600650624 447.2249832550453 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 AAQKE 1.1735 - 225 + 1 2.197 117911.8 0.6299999952316284 2330 4303 6633 HBL1_DMSO_200M_050219_2,6635 HBL1_DMSO_200M_050219_2,6635,SYPTKQAAL False True SYPTKQAAL 35.184251 489.766894519329 4506156.5 6633.0 ENST00000553252.1_1_12:46764947-46766316:-|nuORF;;ENSG00000134294|ENST00000256689|SLC38A2 6.77600892384847 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6637 35.189 6.3 9486100.0 25 0 1220800.0 + 3296 AYIENAKQV 9 85 518.2769556217038 1034.5393583102075 2 518.2775146365166 MULTI CID FTMS 0 0 0 6636 9303831.0 0.7207381688998155 2 -0.1058158874511718 1 Unmodified _AYIENAKQV_ ENSG00000121022|ENST00000357849|COPS5;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 85.27202061508552 0.0162393975915471 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAKQV 9 0 + 79.521 0.0 0.0 7.6866 7.6866 88.141 0.0 0.0 0.0 42.84633986495051 12.825878518657532 12.825878518657532 6.624379954164596 0 1.0994850021680094 2.0 0.3494850021680094 1.430884548956689 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAKQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}DQAKQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EGGAKQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENAK[AG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}D[AG]AKQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}DQAK[AG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EGGAK[AG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}D[AG]AK[AG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[KP]D{I|L}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}D[KP]{[ET]|[MV]}V 7.6866;7.0463;6.7965;6.5438;6.1562;5.9035;5.658;5.0177;4.1243;4.009 +;-;-;-;-;-;-;-;-;- + 1044 + 1 2.197 53085.0 1.0 2331 4304 6636 HBL1_DMSO_200M_050219_2,6637 HBL1_DMSO_200M_050219_2,6637,AYIENAKQV True True AYIENAKQV 35.188753 518.277514636517 256150056.0 6636.0 ENSG00000121022|ENST00000357849|COPS5;;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 7.508713404337565 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6638 35.19 7.2 8105300.0 25 0 1234700.0 + 5786 DPPPGSHVI 9 74 459.7377035282235 917.460854123247 2 459.7379333376884 MULTI CID FTMS 0 0 0 6636 8014843.5 0.8162459955808811 -4 0.0818519592285156 2 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 42.09456458481378 0.0639583784996157 4 [DP]PPAP{I|L} 7 4 47.624 0.0 0.0 5.1909 0.0 0.0 0.0 227.06812886373453 227.06812886373453 36.82721341614666 0.0 0.0 0.0 0 1.242992819099939 2.0 0.7614393726401688 0.0 [DP]PPAP{I|L} 5.1909 - 140 1 2.197 51242.6 1.0 2332 4304 6636 HBL1_DMSO_200M_050219_2,6638 HBL1_DMSO_200M_050219_2,6638,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6639 35.197 392.0 354690.0 25 0 21308.0 + 16464 KAIRDGVIEA 10 135 536.3116057946401 1070.60865865608 2 536.3114501833916 MULTI CID FTMS 0 0 0 6636 291172.03125 0.5979881807948184 -2 0.0535392761230468 3 Unmodified _KAIRDGVIEA_ ENSG00000108344|ENST00000264639|PSMD3;ENST00000415039.7_1_17:38140716-38152959:+|nuORF;nc|ENSG00000108344|O43242-2|PSMD3 38.16057220495361 0.1769910087603572 4 R{I|L}EA 4 6 45.737 0.0 0.0 4.272 0.0 0.0 583.3413563459 0.0 583.3413563459 0.0 16.468488073214253 0.0 0.0 0 0.9749073637206092 0.0 0.0 0.7059771852360797 R{I|L}EA 4.272 - 153 1 2.197 110109.4 1.0 2333 4304 6636 HBL1_DMSO_200M_050219_2,6639 HBL1_DMSO_200M_050219_2,6639,KAIRDGVIEA False True KAIRDGVIEA 35.196957 536.311450183392 9937504.5 6636.0 ENST00000415039.7_1_17:38140716-38152959:+|nuORF;;ENSG00000108344|ENST00000264639|PSMD3;;nc|ENSG00000108344|O43242-2|PSMD3 5.378729343414307 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6640 35.201 228.0 502100.0 25 0 34206.0 + 16466 KAIRDGVIEA 10 107 357.87714216202886 1070.6095970862866 3 357.8766052126884 MULTI CID FTMS 0 0 0 6636 197198.375 0.4517554312361989 -2 0.0535392761230468 4 Unmodified _KAIRDGVIEA_ ENSG00000108344|ENST00000264639|PSMD3;ENST00000415039.7_1_17:38140716-38152959:+|nuORF;nc|ENSG00000108344|O43242-2|PSMD3 17.04857598603903 0.5614834650426465 4 {[ET]|[MV]}TVGDK 7 9 29.742 0.0 0.0 2.778 0.0 0.0 0.0 337.1870211236938 337.1870211236938 15.76229158546596 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 {[ET]|[MV]}TVGDK 2.778 - 80 + 1 2.197 96498.8 1.0 2334 4304 6636 HBL1_DMSO_200M_050219_2,6640 HBL1_DMSO_200M_050219_2,6640,KAIRDGVIEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6641 35.215 800.0 180280.0 25 0 12018.0 + 5835 DPSQPQTTI 9 156 493.7433240866455 985.472095240091 2 493.7432433962822 MULTI CID FTMS 0 0 0 6636 179920.6875 0.2657434718294829 -5 0.1116981506347656 5 Unmodified _DPSQPQTTI_ ENSG00000005339|ENST00000262367|CREBBP;ENSG00000100393|ENST00000263253|EP300;nc|ENSG00000005339|Q92793-2|CREBBP 66.45667989310934 0.0225072657982126 4 [DP]SQPQTT{I|L} 9 0 + 68.937 0.0 0.0 6.9953 6.9953 82.884 0.0 0.0 0.0 3.830809237667154 8.824995917031941 3.830809237667154 3.830809237667154 0 1.048455006504028 2.0 1.860924374808178 0.0 + + [DP]SQPQTT{I|L};[PS]QDPQTT{I|L};[PS]DQPQTT{I|L};[DP]SQP[AG]TT{I|L};[DP]S[AG]PQTT{I|L};[PS]NEPQTT{I|L};[QP]SDPQTT{I|L};[PS][AG]DPQTT{I|L};[PS]QDP[AG]TT{I|L};[PS]QPDQTT{I|L} 6.9953;6.6066;6.4968;6.0609;6.0609;6.0126;5.8294;5.6722;5.6722;5.6468 +;-;-;-;-;-;-;-;-;- + 2059 1 2.197 111458.1 0.699999988079071 2335 4304 6636 HBL1_DMSO_200M_050219_2,6641 HBL1_DMSO_200M_050219_2,6641,DPSQPQTTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6642 35.229 800.0 367990.0 25 0 24701.0 + 20124 LKKQPRLL 8 235 332.5625372809104 994.6657824429312 3 332.5619689822197 MULTI CID FTMS 0 0 0 6636 124371.7578125 0.5876362321731546 -1 0.0184898376464843 6 Unmodified _LKKQPRLL_ REV__ENST00000361203.7_2_6:56472809-56472863:-|nuORF 24.020572477871973 0.5389365498350341 4 PQK{I|L}K[R{I|L}]{I|L} 8 -1 + 53.116 0.0 0.0 5.3401 5.3401 74.893 0.0 0.0 0.0 36.85694565209612 10.731457247781648 10.731457247781648 3.0102999566398125 0 0.627862320874889 0.5686362358410126 0.0 0.9247425010840048 PQK{I|L}K[R{I|L}]{I|L};PQ{I|L}KK[R{I|L}]{I|L};P[AG]K{I|L}K[R{I|L}]{I|L};P[AG]{I|L}KK[R{I|L}]{I|L};{I|L}[QP]KK[R{I|L}]{I|L} 5.3401;5.0374;3.8372;3.5346;2.8463 -;-;-;-;- 125 + 1 2.197 234404.3 0.4699999988079071 2336 4304 6636 HBL1_DMSO_200M_050219_2,6642 HBL1_DMSO_200M_050219_2,6642,LKKQPRLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6643 35.243 800.0 123090.0 25 0 5038.9 -1 RPCPWNYGQF 10 108 662.7998142062 1323.5850754792 2 662.8019897341728 MULTI CID FTMS 0 0 0 6636 100864.609375 0.6655359843488081 -2 0.0535392761230468 7 Carbamidomethyl (C) _RPC(Carbamidomethyl (C))PWNYGQF_ ENSG00000104055|ENST00000220420|TGM5;nc|ENSG00000104055|O43548-2|TGM5 25.399314129420983 0.3980215340001851 4 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F} 12 -1 + 98.387 0.0 0.0 7.4333 7.4333 83.039 0.0 0.0 0.0 15.764315747219186 16.611814434466197 15.764315747219186 3.133345013315264 0 1.261439372640169 1.154901959985743 0.0 1.5629529932484498 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}Q[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA[W{M(Oxidation (M))|F}]A[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA[W{M(Oxidation (M))|F}]AQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA[W{M(Oxidation (M))|F}]AQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F} 7.4333;7.1966;6.7459;6.7459;6.7459;6.7064;6.5092;6.5092;6.5092;6.2423 -;-;-;-;-;-;-;-;-;- 1175 1 2.197 74130.7 0.5199999809265137 2337 4304 6636 HBL1_DMSO_200M_050219_2,6643 HBL1_DMSO_200M_050219_2,6643,RPCPWNYGQF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6644 35.257 800.0 108910.0 25 0 8944.9 + 4004 DALRSGLT 8 122 416.729754494869 0 416.7298156619072 PEAK CID FTMS 0 0 0 6636 92054.2265625 1.0 0 0.0 8 Unmodified _DALRSGLT_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 38.17557092003332 0.1570009502315449 4 {I|L} 1 7 13.737 0.0 0.0 1.6522 0.0 0.0 119.057945413763 596.2809287848063 715.3388741985693 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 + {I|L} 1.6522 + + 72 + 1 2.197 72591.6 0.4399999976158142 2338 4304 6636 HBL1_DMSO_200M_050219_2,6644 HBL1_DMSO_200M_050219_2,6644,DALRSGLT False True DALRSGLT 35.256522 416.729815661907 530089.125 6636.0 nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 4.570683638254802 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6646 35.261 5.0 10767000.0 25 0 1705700.0 + 3197 AVVTQVNKV 9 72 479.2901554415722 956.5657579499444 2 479.2903625369072 MULTI CID FTMS 0 0 0 6645 11837125.0 0.7789682888826401 2 -0.0887451171875 1 Unmodified _AVVTQVNKV_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 58.6788170122104 0.0268135626297836 4 {[VA]|[{I|L}G]}VTQVNKV 9 0 + 82.273 0.0 0.0 8.6008 8.6008 92.816 0.0 0.0 0.0 45.17175092765598 7.931825014007217 7.931825014007217 9.208187539523747 0 1.079689690656103 2.0 0.4247425010840047 0.805462187404089 + + {[VA]|[{I|L}G]}VTQVNKV;{[VA]|[{I|L}G]}VT[AG]VNKV;{[VA]|[{I|L}G]}VTQVGGKV;{[VA]|[{I|L}G]}VT[AG]VGGKV;{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]{I|L}V[NP];{[VA]|[{I|L}G]}VTA{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}];{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]{I|L}[NP]V;{[VA]|[{I|L}G]}VT[TP]T[R{I|L}];{[VA]|[{I|L}G]}{[SA]|[TG]}{I|L}{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}];{[TV]|[{I|L}S]}Q{I|L}{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}] 8.6008;7.6382;7.6382;6.6801;4.321;3.821;3.6216;3.5063;2.6562;2.0343 +;-;-;-;-;-;-;-;-;- + 500 + 1 2.208 46333.3 1.0 2339 4305 6645 HBL1_DMSO_200M_050219_2,6646 HBL1_DMSO_200M_050219_2,6646,AVVTQVNKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6647 35.262 30.0 2399100.0 25 0 377650.0 + + -1 RVEEAIHPV 9 71 525.2902910902392 1048.5660292472785 2 525.2905151247978 MULTI CID FTMS 0 0 0 6645 1645812.75 0.7932236008219185 2 -0.0887451171875 2 Oxidation (M) _TLLM(Oxidation (M))LAMLQ_ ENST00000367590.8_1_1:180601192-180601402:+|nuORF 20.453626601364224 0.2830276176381075 4 [{I|L}T]H{I|L}{M(Oxidation (M))|F} 5 -1 29.208 0.0 0.0 2.7855 0.0 0.0 0.0 434.1903780572876 434.1903780572876 7.327796776480469 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 [{I|L}T]H{I|L}{M(Oxidation (M))|F} 2.7855 - 83 + 1 2.208 60495.9 1.0 2340 4305 6645 HBL1_DMSO_200M_050219_2,6647 HBL1_DMSO_200M_050219_2,6647,TLLMLAMLQ False False RVEEAIHPV 35.262292 525.290515124798 28132900.0 6645.0 ENST00000367590.8_1_1:180601192-180601402:+|nuORF 6.241642951965332 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6648 35.276 800.0 228880.0 25 0 15234.0 -1 TVSCSKMSSI 10 162 529.7480028777774 1057.4814528223546 2 529.7482787966728 MULTI CID FTMS 0 0 0 6645 145323.59375 0.3775765092265753 -2 0.090850830078125 3 Oxidation (M) _TVSCSKM(Oxidation (M))SSI_ ENSG00000134852|ENST00000513440|CLOCK 24.020572477871973 0.4289996903560794 4 {[TV]|[{I|L}S]}SG[HK]NS[DN] 10 -1 + 34.076 0.0 0.0 3.2224 3.2224 74.279 0.0 0.0 0.0 5.46983721748952 4.259687322722812 4.259687322722812 9.093694704528197 0 0.0 1.5228787452803376 1.3494850021680094 0.0 {[TV]|[{I|L}S]}SG[HK]NS[DN];{NN|[MP]|[D{I|L}]|[EV]}Q[RP]NS[DN];{[TV]|[{I|L}S]}SG[HK]GGS[DN];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[YC]|[HE]}SS[DN];{[CA]|SS}{I|L}G[HK]NS[DN];{NN|[MP]|[D{I|L}]|[EV]}Q[RP]GGS[DN];{NN|[MP]|[D{I|L}]|[EV]}[AG][RP]NS[DN];[AG]D{I|L}[RP]NS[DN];{[QV]|[N{I|L}]|[RA]|[KV]}E[RP]NS[DN];[PA]TS[RP]NS[DN] 3.2224;2.3624;2.3557;1.9704;1.687;1.4916;1.4916;1.2507;1.1795;1.1712 -;-;-;-;-;-;-;-;-;- 852 1 2.208 137049.8 0.6200000047683716 2341 4305 6645 HBL1_DMSO_200M_050219_2,6648 HBL1_DMSO_200M_050219_2,6648,TVSCSKMSSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6649 35.29 800.0 85471.0 25 0 18172.0 -1 0 42 1108.8070519964665 3323.399326589599 3 1109.476123034954 MULTI CID FTMS 0 0 0 6645 118701.9140625 0.6314448531566123 -1 0.0723609924316406 4 4 Y 1 -1 6.9897 0.0 0.0 0.21032 0.0 0.0 1619.5866567671362 1537.7395723932252 3157.326229160361 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.21032 - 8 + 1 2.208 65667.4 0.4799999892711639 2342 4305 6645 HBL1_DMSO_200M_050219_2,6649 HBL1_DMSO_200M_050219_2,6649, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6651 35.295 60.0 992340.0 25 0 115070.0 + 3260 AYGPPTRAV 9 64 466.2535885521363 930.4926241710726 2 466.2536804080009 MULTI CID FTMS 0 0 0 6650 909869.125 0.1746893657911902 -8 0.2214508056640625 1 Unmodified _AYGPPTRAV_ ENSG00000084463|ENST00000261167|WBP11 22.736283301280096 0.2418982879461534 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5 4 49.08 0.0 0.0 5.2747 0.0 0.0 0.0 442.2411287897094 442.2411287897094 42.09060619004511 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5.2747 + + 45 + 1 2.208 55605.5 1.0 2343 4306 6650 HBL1_DMSO_200M_050219_2,6651 HBL1_DMSO_200M_050219_2,6651,AYGPPTRAV False True AYGPPTRAV 35.294571 466.253680408001 222296860.0 6650.0 ENSG00000084463|ENST00000261167|WBP11 5.77715539932251 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6652 35.299 234.0 301300.0 25 0 50662.0 + 5065 DGYEQAARV 9 90 504.7409398526873 1007.4673267721746 2 504.7409240603447 MULTI CID FTMS 0 0 0 6650 214993.53125 0.0007371574235522 69 -3.186119079589844 2 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 34.40172386719151 0.1061884637610825 4 [YG]DEQAA[RV] 9 2 [YG]D + + 35.877 20.458 6.1047 3.5611 3.5611 47.333 0.0 0.0 0.0 0.0 15.419562702124452 0.0 0.0 0 0.75 0.0 0.4247425010840047 0.3494850021680094 [YG]DEQAA[RV] 3.5611 - 123 + 1 2.208 62245.5 1.0 2344 4306 6650 HBL1_DMSO_200M_050219_2,6652 HBL1_DMSO_200M_050219_2,6652,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6653 35.309 561.0 180940.0 25 0 44956.0 + 25939 NLNDEAQTREL 11 78 434.8819719445425 0 434.8821899294853 PEAK CID FTMS 0 0 0 6650 150594.421875 0.620918028169504 97 -4.381538391113281 3 Unmodified _NLNDEAQTREL_ REV__ENSG00000183137|ENST00000517392|CEP57L1;REV__nc|ENSG00000183137|Q8IYX8-2|CEP57L1 2.735195868890462 0.4761840153648598 4 G 1 -1 3.0989 0.0 0.0 0.35712 0.0 0.0 433.50300531311 374.19599329166255 807.6989986047726 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.35712 - 1 + 1 2.208 82304.7 1.0 2345 4306 6650 HBL1_DMSO_200M_050219_2,6653 HBL1_DMSO_200M_050219_2,6653,NLNDEAQTREL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6654 35.321 713.0 241570.0 25 0 23448.0 31776 RSIQEAPAV 9 152 485.7682523962941 969.5219518593884 2 485.7687560915947 MULTI CID FTMS 0 0 0 6650 128141.1796875 0.993814889357229 1 -0.0552902221679687 4 Unmodified _RSIQEAPAV_ nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1 19.361941925380144 0.3125782356748823 4 [PA]G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAPAV 10 5 + 49.133 0.0 0.0 5.0677 5.0677 77.204 0.0 0.0 0.0 12.183589881006696 14.309297785430443 12.183589881006696 5.356216463058274 0 0.8882104921644451 1.2218487496163564 0.3807196863200844 0.0 [PA]G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAPAV;[PA]A[{M(Oxidation (M))|F}V]QAPAV;{[QN]|[E{I|L}]|[KN]}{[QD]|[EN]|[WG]|[KD]|[RS]}QAPAV;[PA][WM]KAPAV;[PA]G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}APAV;{[DA]|[EG]}[WK]{I|L}APAV;[VS]V{[CP]|[EA]}QAPAV;[QP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAPAV;[TA]{I|L}{[CP]|[EA]}QAPAV;{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}EAPAV 5.0677;4.5153;3.8111;3.606;3.2265;3.1956;3.1556;3.1337;3.1089;2.8777 -;-;-;-;-;-;-;-;-;- 753 1 2.208 131316.6 1.0 2346 4306 6650 HBL1_DMSO_200M_050219_2,6654 HBL1_DMSO_200M_050219_2,6654,RSIQEAPAV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 6655 35.331 581.0 143920.0 25 0 6924.5 35027 SQQEELEQL 9 115 552.2666838069421 0 552.2673828005791 PEAK CID FTMS 0 0 0 6650 108001.5078125 0.8915082956706862 3 -0.2010650634765625 5 Unmodified _SQQEELEQL_ ENSG00000167202|ENST00000300584|TBC1D2B;nc|ENSG00000167202|Q9UPU7-2|TBC1D2B 14.838274106304384 0.2567717476666951 4 PNVP{I|L}E 6 7 20.839 0.0 0.0 1.8901 0.0 0.0 162.04238060533595 288.0991937620237 450.1415743673596 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 PNVP{I|L}E 1.8901 - 180 + 1 2.208 70107.9 1.0 2347 4306 6650 HBL1_DMSO_200M_050219_2,6655 HBL1_DMSO_200M_050219_2,6655,SQQEELEQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6656 35.345 800.0 150370.0 25 0 16024.0 + 26713 NYQTRQEF 8 131 543.2550786080383 1084.4956042828765 2 543.2547485232353 MULTI CID FTMS 0 0 0 6650 109587.390625 1.0 0 0.0 6 Unmodified _NYQTRQEF_ ENSG00000089597|ENST00000356638|GANAB;nc|ENSG00000089597|Q14697-2|GANAB 63.960520009940105 0.1161527639280749 4 NYQT 4 4 64.954 0.0 0.0 5.9893 0.0 0.0 0.0 575.2596529596311 575.2596529596311 31.75582814447204 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.6861818737241735 0.4247425010840047 + NYQT 5.9893 + + 1160 + 1 2.208 96964.3 0.5600000023841858 2348 4306 6650 HBL1_DMSO_200M_050219_2,6656 HBL1_DMSO_200M_050219_2,6656,NYQTRQEF True True NYQTRQEF 35.345163 543.254748523235 820950.625 6650.0 nc|ENSG00000089597|Q14697-2|GANAB;;ENSG00000089597|ENST00000356638|GANAB 6.999133745829265 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6658 35.36 629.0 293370.0 25 0 71937.0 -1 0 129 388.2149460907335 387.20766962413353 1 388.2137328982353 MULTI CID FTMS 0 0 0 6657 115891.2578125 0.0600679925145178 -10 0.2806930541992187 1 4 QQ{I|L} 3 -1 QQ + + 9.5329 -1.6723 -0.65294 2.462 2.462 45.045 0.0 0.0 0.0 0.0 0.1115247706751176 0.0 0.0 0 0.0 0.0 0.0 0.0 QQ{I|L} 2.462 - 15 + 1 2.21 148387.4 1.0 2349 4307 6657 HBL1_DMSO_200M_050219_2,6658 HBL1_DMSO_200M_050219_2,6658, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6659 35.364 245.0 314740.0 25 0 21444.0 + 14068 IANQDPIAV 9 110 470.75864941967006 939.50274590614 2 470.7587463259697 MULTI CID FTMS 0 0 0 6657 276132.1875 0.7417704532044095 5 -0.218841552734375 2 Unmodified _IANQDPIAV_ ENSG00000157168|ENST00000405005|NRG1;nc|ENSG00000157168|Q02297-11|NRG1;nc|ENSG00000157168|Q02297-2|NRG1;nc|ENSG00000157168|Q02297-6|NRG1;nc|ENSG00000157168|Q02297-7|NRG1 39.957323273325 0.0756908302845263 4 [AG]PPSQTV[{I|L}A] 10 7 + 48.28 0.0 0.0 5.1389 5.1389 69.52 0.0 0.0 0.0 0.5992644675488634 0.7918124604762511 0.5992644675488634 0.5992644675488634 0 0.0 0.8538719643217619 1.1549471895720984 0.4247425010840047 [AG]PPSQTV[{I|L}A];[QP]PSQTV[{I|L}A];{[HG]|PP}QSQTV[{I|L}A];[QP]PS[AG]TV[{I|L}A];{[HG]|PP}QS[AG]TV[{I|L}A];{[HG]|PP}[AG]SQTV[{I|L}A];[AG]PPS[AG]TV[{I|L}A];[{I|L}A]NQ[DP]V[{I|L}A];[PS][QP]QTV[{I|L}A];[{I|L}A]N[NP]EV[{I|L}A] 5.1389;5.0751;4.7547;4.095;3.7746;3.7746;3.7114;3.6874;3.5029;2.9903 -;-;-;-;-;-;-;-;-;- 1223 1 2.21 63234.5 1.0 2350 4307 6657 HBL1_DMSO_200M_050219_2,6659 HBL1_DMSO_200M_050219_2,6659,IANQDPIAV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6660 35.378 800.0 73284.0 25 0 17275.0 -1 0 43 1133.4781640398414 3397.4126627197247 3 1134.145312488079 MULTI CID FTMS 0 0 0 6657 143536.109375 0.8527114722011641 -1 0.0552902221679687 3 4 KD 2 -1 10.969 0.0 0.0 0.32287 0.0 0.0 2350.832458943899 800.4121187799436 3151.2445777238427 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KD 0.32287 - 24 + 1 2.21 54968.5 0.4600000083446502 2351 4307 6657 HBL1_DMSO_200M_050219_2,6660 HBL1_DMSO_200M_050219_2,6660, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6661 35.392 800.0 116340.0 25 0 11723.0 13754 HRWQDNIKEED 11 88 735.3413677247481 1468.6681825162962 2 735.3423339724541 MULTI CID FTMS 0 0 0 6657 111776.8515625 0.8707496336840732 -1 0.0552902221679687 4 Unmodified _HRWQDNIKEED_ ENSG00000007402|ENST00000424201|CACNA2D2;nc|ENSG00000007402|Q9NY47-3|CACNA2D2;nc|ENSG00000007402|Q9NY47-4|CACNA2D2;nc|ENSG00000007402|Q9NY47-5|CACNA2D2;nc|ENSG00000007402|Q9NY47|CACNA2D2 23.78978130925829 0.5336113198261219 4 {I|L}DEED 5 7 51.612 0.0 0.0 3.5142 0.0 0.0 849.433062852354 0.0 849.433062852354 0.0 19.94219050288216 0.0 0.0 0 0.9361818737241734 0.0 0.7302046884880937 0.0 {I|L}DEED 3.5142 - 434 1 2.21 70540.1 0.550000011920929 2352 4307 6657 HBL1_DMSO_200M_050219_2,6661 HBL1_DMSO_200M_050219_2,6661,HRWQDNIKEED False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6662 35.406 800.0 87848.0 25 0 4201.9 + 29183 QGDDTKRCLTN 11 111 625.7913460331853 1249.5681391331705 2 625.7905761599541 MULTI CID FTMS 0 0 0 6657 89444.3125 0.8485106577880238 -1 0.0552902221679687 5 Unmodified _QGDDTKRCLTN_ REV__ENSG00000115760|ENST00000421745|BIRC6 32.037481411007896 0.3399527776090619 4 A{[QG]|[NA]}G{M(Oxidation (M))|F}{I|L}QS 8 -1 28.945 0.0 0.0 2.3164 0.0 0.0 443.1810780255875 0.0 443.1810780255875 0.0 -2.621571592199672 -2.621571592199672 0.0 0 0.5796896906561032 0.0 0.0 0.4247425010840047 A{[QG]|[NA]}G{M(Oxidation (M))|F}{I|L}QS 2.3164 - 126 1 2.21 60554.5 0.5199999809265137 2353 4307 6657 HBL1_DMSO_200M_050219_2,6662 HBL1_DMSO_200M_050219_2,6662,QGDDTKRCLTN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6664 35.411 80.0 886340.0 25 0 72493.0 -1 0 82 547.3092425141134 546.3019660475134 1 547.3094360232353 MULTI CID FTMS 0 0 0 6663 874188.875 0.9424341228668844 -1 0.0608787536621093 1 4 [Q{I|L}]TSV 5 -1 + 56.414 0.0 0.0 10.327 10.327 87.897 0.0 0.0 0.0 4.088709367037282 4.088709367037282 4.088709367037282 4.088709367037282 0 0.7742275032520141 1.0969100130080565 0.8494850021680094 0.0 [Q{I|L}]TSV;Q{I|L}TSV;[AG]{I|L}TSV;[{I|L}T]QSV;[{I|L}T][AG]SV;{[QD]|[EN]|[WG]|[KD]|[RS]}VSV;{[MG]|[TS]}Q{I|L}V;[VS]GVSV;{[MG]|[TS]}V{I|L}Q;[AG]ST{I|L}V 10.327;9.5782;9.4818;9.018;7.2712;5.9943;5.9709;5.2983;4.7987;4.7444 -;-;-;-;-;-;-;-;-;- 184 1 2.21 62767.4 1.0 2354 4308 6663 HBL1_DMSO_200M_050219_2,6664 HBL1_DMSO_200M_050219_2,6664, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6665 35.413 107.0 693370.0 25 0 41030.0 + 30405 RAVEELHKL 9 112 365.5490498636207 1093.6253201910622 3 365.5485717654228 MULTI CID FTMS 0 0 0 6663 232070.84375 0.2581253198209274 3 -0.1500282287597656 2 Unmodified _RAVEELHKL_ ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR 31.26834338654808 0.1333407332142048 4 {[QV]|[N{I|L}]|[RA]|[KV]}VEE{I|L} 6 3 39.601 0.0 0.0 3.621 0.0 0.0 0.0 393.2267685473594 393.2267685473594 16.662844453510445 0.0 0.0 0.0 0 0.6549471895720985 0.0 0.3252574989159953 0.2887254899964357 + {[QV]|[N{I|L}]|[RA]|[KV]}VEE{I|L} 3.621 + + 218 1 2.21 65681.6 1.0 2355 4308 6663 HBL1_DMSO_200M_050219_2,6665 HBL1_DMSO_200M_050219_2,6665,RAVEELHKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6666 35.415 87.0 851660.0 25 0 118180.0 + 43672 YARVEGREI 9 90 364.8650316632596 1091.573265589979 3 364.8647338747978 MULTI CID FTMS 0 0 0 6663 421869.40625 1.0 0 0.0 3 Unmodified _YARVEGREI_ ENSG00000115524|ENST00000335508|SF3B1 20.41453444215458 0.284085796332423 4 YARV{M(Oxidation (M))|F}EV 7 4 63.436 0.0 0.0 5.8114 0.0 0.0 0.0 224.11519800357652 224.11519800357652 48.03472940049659 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5 0.0 YARV{M(Oxidation (M))|F}EV 5.8114 - 310 + 1 2.21 65171.3 1.0 2356 4308 6663 HBL1_DMSO_200M_050219_2,6666 HBL1_DMSO_200M_050219_2,6666,YARVEGREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6667 35.429 795.0 356630.0 25 0 26934.0 43760 YEGSGSDAASL 11 232 352.8218239327274 1055.4436423983825 3 352.8210021853447 MULTI CID FTMS 0 0 0 6663 162841.65625 0.7793907646466137 -2 0.1161689758300781 4 Unmodified _YEGSGSDAASL_ ENSG00000062038|ENST00000264012|CDH3;ENST00000429102.6_2_16:68732081-68732300:+|nuORF;ENST00000542274.5_1_16:68679206-68732300:+|nuORF;ENST00000567674.1_1_16:68721613-68732300:+|nuORF 5.731851221503515 0.8481046878870278 4 V{M(Oxidation (M))|F}M[HD]PK{I|L} 8 9 26.667 0.0 0.0 2.5266 0.0 0.0 69.93880869571838 0.0 69.93880869571838 0.0 15.183801482744864 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.1139829889124311 V{M(Oxidation (M))|F}M[HD]PK{I|L} 2.5266 - 1045 + 1 2.21 235322.3 1.0 2357 4308 6663 HBL1_DMSO_200M_050219_2,6667 HBL1_DMSO_200M_050219_2,6667,YEGSGSDAASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6668 35.436 391.0 234360.0 25 0 26574.0 -1 0 127 455.24910934105975 454.24183287445976 1 455.2492553591728 MULTI CID FTMS 0 0 0 6663 156171.90625 0.4616277281408114 -5 0.2404747009277343 5 4 {I|L} 1 -1 10.089 0.0 0.0 2.221 0.0 0.0 323.14673812523944 0.0 323.14673812523944 0.0 1.3162071738729075 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.221 - 10 + 1 2.21 75845.5 1.0 2358 4308 6663 HBL1_DMSO_200M_050219_2,6668 HBL1_DMSO_200M_050219_2,6668, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6669 35.444 454.0 191490.0 25 0 13468.0 -1 0 103 620.3133180947808 619.3060416281808 1 620.3130981326103 MULTI CID FTMS 0 0 0 6663 150450.109375 0.3201497422458637 33 -1.0650787353515625 6 4 PP[QP]N 5 -1 25.986 0.0 0.0 4.1961 0.0 0.0 68.03457733085504 0.0 68.03457733085504 0.0 8.539171939081172 0.0 0.0 0 0.0 0.0 0.0 1.0044321917401078 PP[QP]N 4.1961 - 276 + 1 2.21 69439.1 1.0 2359 4308 6663 HBL1_DMSO_200M_050219_2,6669 HBL1_DMSO_200M_050219_2,6669, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6670 35.457 784.0 364880.0 25 0 35521.0 + 41292 VPHTRPVSL 9 197 335.8665827678017 1004.577918903605 3 335.8661071658134 MULTI CID FTMS 0 0 0 6663 121173.5234375 0.2125207201457803 -5 0.2404747009277343 7 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 78.06048673739656 0.0179866705178931 4 VPHTRPVS{I|L} 9 0 + 76.139 0.0 0.0 7.5792 7.5792 95.834 0.0 0.0 0.0 31.58670414216409 14.97302484056646 14.97302484056646 38.73380636665302 0 2.166386562212267 1.5228787452803376 1.1479400086720375 0.0 + + VPHTRPVS{I|L};V{M(Oxidation (M))|F}V[WR]VS{I|L};[HT][RP]VSPV{I|L};[HT][RP]VSP{I|L}V;[HT][RP]VPSV{I|L};[HT][RP]VPS{I|L}V;[HT][RP]VPVS{I|L};{[TV]|[{I|L}S]}[{I|L}T]{[CA]|SS}VSV{I|L};[HT][RP]VS{I|L}PV;[HT][RP]PVSV{I|L} 7.5792;3.7235;3.5234;2.928;2.8548;2.2594;2.1152;1.937;1.9059;1.8988 +;-;-;-;-;-;-;-;-;- + 1111 + 1 2.21 224113.4 1.0 2360 4308 6663 HBL1_DMSO_200M_050219_2,6670 HBL1_DMSO_200M_050219_2,6670,VPHTRPVSL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6671 35.467 556.0 279230.0 25 0 29610.0 + 43205 WACTRSTV 8 143 462.2256744563382 922.4367959794764 2 462.2246276736259 MULTI CID FTMS 0 0 0 6663 115215.8125 0.5511450453570153 -1 0.0608787536621093 8 Unmodified _WACTRSTV_ REV__ENST00000369651.7_1_6:86159426-86159717:+|nuORF 28.486842064014134 0.4448922141344407 4 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QDTV 8 -1 + 41.526 0.0 0.0 4.5018 4.5018 83.535 0.0 0.0 0.0 0.3186708022256539 32.06228073223493 0.3186708022256539 23.521825181113623 0 1.1237125054200234 1.3979400086720375 0.6643943297944485 0.0 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QDTV;{[QV]|[N{I|L}]|[RA]|[KV]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QDTV;[{I|L}V][HC]HDTV;[{I|L}V][HC]HSEV 4.5018;1.9518;1.2073;0.33889 -;-;-;- 193 1 2.21 119252.3 1.0 2361 4308 6663 HBL1_DMSO_200M_050219_2,6671 HBL1_DMSO_200M_050219_2,6671,WACTRSTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6672 35.476 504.0 181430.0 25 0 24796.0 + 4341 DASLQPRNV 9 130 500.2650106665505 998.515468399901 2 500.2660705447197 MULTI CID FTMS 0 0 0 6663 115343.921875 0.0157554141686269 29 -0.9496498107910156 9 Unmodified _DASLQPRNV_ ENSG00000124226|ENST00000244061|RNF114;nc|ENSG00000124226|Q9Y508-2|RNF114 48.345845343767074 0.0439967357579942 4 {[DA]|[EG]}S{I|L}{I|L}R 6 4 35.207 0.0 0.0 3.5259 0.0 0.0 0.0 340.12494040601354 340.12494040601354 20.742946587693964 0.0 0.0 0.0 0 0.8182503180159344 1.5228787452803376 0.7614393726401688 0.0 {[DA]|[EG]}S{I|L}{I|L}R 3.5259 - 274 1 2.21 73321.9 1.0 2362 4308 6663 HBL1_DMSO_200M_050219_2,6672 HBL1_DMSO_200M_050219_2,6672,DASLQPRNV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6673 35.491 800.0 38500.0 25 0 9623.0 -1 0 31 1095.7766770004068 3284.3082016014205 3 1096.111743152142 MULTI CID FTMS 0 0 0 6663 92926.1953125 0.0485123218015707 27 -0.8785171508789062 10 4 E 1 -1 6.9897 0.0 0.0 0.21282 0.0 0.0 2628.0792720133336 524.1651095025999 3152.2443815159336 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21282 - 6 + 1 2.21 34561.7 0.4000000059604645 2363 4308 6663 HBL1_DMSO_200M_050219_2,6673 HBL1_DMSO_200M_050219_2,6673, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6675 35.496 6.1 9342500.0 25 0 1332500.0 + 5787 DPPPGSHVI 9 73 459.7377035282235 917.460854123247 2 459.7378723025322 MULTI CID FTMS 0 0 0 6674 9268102.0 0.9438800825162906 1 -0.042724609375 1 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 50.855029805455786 0.0384952370514206 4 [DP]P[HK]{I|L}[DP] 8 6 + 45.518 0.0 0.0 4.9613 4.9613 78.259 0.0 0.0 0.0 3.567430710554838 21.917504964012487 3.567430710554838 6.670918457378008 0 1.0 2.0 0.6643943297944485 0.0 [DP]P[HK]{I|L}[DP];[DP]PP[SG]H[{I|L}V];[DP][HK]P{I|L}[DP];{[ET]|[MV]}{I|L}[HK][YQ];{[HG]|PP}D[HK]{I|L}[DP];{[WT]|[RM]}{[MG]|[TS]}V{I|L}[DP] 4.9613;4.2342;4.0062;1.1417;1.0891;1.0541 -;+;-;-;-;- + 119 1 2.211 49773.0 1.0 2364 4309 6674 HBL1_DMSO_200M_050219_2,6675 HBL1_DMSO_200M_050219_2,6675,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6676 35.498 93.0 737110.0 25 0 83935.0 + 3297 AYIENAKQV 9 107 518.2769556217038 1034.5393583102075 2 518.2773315310478 MULTI CID FTMS 0 0 0 6674 417733.3125 0.0323604698687781 7 -0.1361236572265625 2 Unmodified _AYIENAKQV_ ENSG00000121022|ENST00000357849|COPS5;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 25.399314129420983 0.2080152500878129 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WP]{[VA]|[{I|L}G]}{I|L}{[ES]|[DT]|[{I|L}C]} 9 6 + 24.656 0.0 0.0 2.3833 2.3833 76.9 0.0 0.0 0.0 5.192183891903856 -13.57577549998069 -13.57577549998069 15.48209952937228 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WP]{[VA]|[{I|L}G]}{I|L}{[ES]|[DT]|[{I|L}C]};[{I|L}T]W{[WT]|[RM]}{I|L}{[ES]|[DT]|[{I|L}C]};[KA]N{[CT]|[{M(Oxidation (M))|F}G]}{[VA]|[{I|L}G]}{I|L}{[ES]|[DT]|[{I|L}C]} 2.3833;0.88677;0.86324 -;-;- 371 1 2.211 57531.2 1.0 2365 4309 6674 HBL1_DMSO_200M_050219_2,6676 HBL1_DMSO_200M_050219_2,6676,AYIENAKQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6677 35.499 42.0 1439300.0 25 0 128050.0 + 35485 STMSTNGIPR 10 83 532.2639720813365 1062.513391229473 2 532.2641479372978 MULTI CID FTMS 0 0 0 6674 1213023.5 0.3681390197115202 -7 0.3604202270507812 3 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 55.50274090549119 0.048383292844968 4 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 10 2 + 56.885 0.0 0.0 5.3539 5.3539 75.984 0.0 0.0 0.0 7.269987279362624 3.521825181113627 3.521825181113627 3.521825181113627 0 0.75 0.0 0.0 0.6989700043360187 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MST{[QN]|[E{I|L}]|[KN]}VVP;{[MG]|[TS]}M[{I|L}V][YN][HV] 5.3539;5.0224;4.4913;4.1599;3.0945;0.88067 -;+;-;-;-;- + 158 + 1 2.211 50010.8 1.0 2366 4309 6674 HBL1_DMSO_200M_050219_2,6677 HBL1_DMSO_200M_050219_2,6677,STMSTNGIPR True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6678 35.501 87.0 587270.0 25 0 50326.0 + 5836 DPSQPQTTI 9 86 493.7433240866455 985.472095240091 2 493.7433044314384 MULTI CID FTMS 0 0 0 6674 677046.5 1.0 0 0.0 4 Unmodified _DPSQPQTTI_ ENSG00000005339|ENST00000262367|CREBBP;ENSG00000100393|ENST00000263253|EP300;nc|ENSG00000005339|Q92793-2|CREBBP 53.832793166522166 0.0319663582346103 4 [DP]SQPQTT{I|L} 9 0 + 56.565 0.0 0.0 5.7399 5.7399 84.618 0.0 0.0 0.0 9.247425010840049 10.330145895351848 9.247425010840049 9.208187539523747 0 0.7429928190999391 2.0 0.6989700043360187 0.2302046884880938 + + [DP]SQPQTT{I|L};[DP]SQP[AG]TT{I|L};[PS]QDPQTT{I|L};[DP]S[AG]PQTT{I|L};[QP]SDPQTT{I|L};[PS]DQPQTT{I|L};[PS]QPDQTT{I|L};{[QS]|[NT]}PDPQTT{I|L};[PS]QDP[AG]TT{I|L};[QP]SPDQTT{I|L} 5.7399;4.8055;4.8015;4.5719;4.5263;4.3213;4.0525;3.8851;3.8671;3.7774 +;-;-;-;-;-;-;-;-;- + 801 1 2.211 46636.3 1.0 2367 4309 6674 HBL1_DMSO_200M_050219_2,6678 HBL1_DMSO_200M_050219_2,6678,DPSQPQTTI True True DPSQPQTTI 35.500812 493.743304431438 14236764.0 6674.0 ENSG00000005339|ENST00000262367|CREBBP;;nc|ENSG00000005339|Q92793-2|CREBBP;;ENSG00000100393|ENST00000263253|EP300 5.572435855865479 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6679 35.506 286.0 318500.0 25 0 28428.0 + 11213 GEPAGEEAET 10 117 495.20671805332273 988.3988831734456 2 495.2071716189384 MULTI CID FTMS 0 0 0 6674 214025.6875 0.6047832543182771 -5 0.3068809509277344 5 Unmodified _GEPAGEEAET_ REV__ENSG00000159212|ENST00000349499|CLIC6;REV__nc|ENSG00000159212|Q96NY7|CLIC6 29.081581746732265 0.3152867722954398 4 {[DA]|[EG]}PAPTP 7 -1 54.429 0.0 0.0 5.5068 0.0 0.0 0.0 336.0696200006469 336.0696200006469 19.62578038388885 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.4247425010840047 0.0 {[DA]|[EG]}PAPTP 5.5068 - 297 + 1 2.211 73798.6 1.0 2368 4309 6674 HBL1_DMSO_200M_050219_2,6679 HBL1_DMSO_200M_050219_2,6679,GEPAGEEAET False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6680 35.52 800.0 137130.0 25 0 8677.4 5928 DQAMMQDCYS 10 144 596.2096007698134 1190.4046486064267 2 596.2102538943291 MULTI CID FTMS 0 0 0 6674 177463.828125 0.6886598682002577 -4 0.2345199584960937 6 Unmodified _DQAMMQDCYS_ ENSG00000157106|ENST00000446231|SMG1;ENST00000562668.1_16:18859095-18860659:-|nuORF;nc|ENSG00000157106|Q96Q15-2|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1 8.155526934196011 0.6889124077178598 4 [QA]DPD 5 7 53.031 0.0 0.0 4.4549 0.0 0.0 0.0 661.1780000070704 661.1780000070704 32.85409319271118 0.0 0.0 0.0 0 1.5 0.9208187539523752 0.2396518287104437 1.0228787452803376 [QA]DPD 4.4549 - 651 1 2.211 85617.5 0.7400000095367432 2369 4309 6674 HBL1_DMSO_200M_050219_2,6680 HBL1_DMSO_200M_050219_2,6680,DQAMMQDCYS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6681 35.534 800.0 162610.0 25 0 13555.0 + 16465 KAIRDGVIEA 10 141 536.3116057946401 1070.60865865608 2 536.3115112185478 MULTI CID FTMS 0 0 0 6674 156290.5 0.3209781906912207 3 -0.0730667114257812 7 Unmodified _KAIRDGVIEA_ ENSG00000108344|ENST00000264639|PSMD3;ENST00000415039.7_1_17:38140716-38152959:+|nuORF;nc|ENSG00000108344|O43242-2|PSMD3 29.291429492411588 0.3105718235091443 4 R{I|L}EA 4 6 41.681 0.0 0.0 3.8932 0.0 0.0 583.3454457013687 0.0 583.3454457013687 0.0 10.300084529637983 0.0 0.0 0 0.5010912013506126 0.0 0.0 0.7742275032520141 R{I|L}EA 3.8932 - 118 1 2.211 103888.2 0.6800000071525574 2370 4309 6674 HBL1_DMSO_200M_050219_2,6681 HBL1_DMSO_200M_050219_2,6681,KAIRDGVIEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6683 35.538 99.0 674620.0 25 0 87651.0 + 3198 AVVTQVNKV 9 95 479.2901554415722 956.5657579499444 2 479.2901183962822 MULTI CID FTMS 0 0 0 6682 516246.875 0.0339727716704656 7 -0.1395187377929687 1 Unmodified _AVVTQVNKV_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 68.08070601005525 0.0218408846571049 4 {[VA]|[{I|L}G]}VTQVNKV 9 0 + 77.973 0.0 0.0 8.1514 8.1514 92.135 0.0 0.0 0.0 50.69432557852118 9.46372858424762 9.46372858424762 9.208187539523747 0 1.0941876774005248 2.0 0.0 1.1861818737241734 + + {[VA]|[{I|L}G]}VTQVNKV;{[VA]|[{I|L}G]}VTQVGGKV;{[VA]|[{I|L}G]}VT[AG]VNKV;{[VA]|[{I|L}G]}VT[AG]VGGKV;{[VA]|[{I|L}G]}[TA][VG]VNKV;[WR]RVNKV;[WR]RVGGKV 8.1514;7.1887;7.1887;6.2307;4.006;2.2879;1.3125 +;-;-;-;-;-;- + 400 + 1 2.211 55642.9 1.0 2371 4310 6682 HBL1_DMSO_200M_050219_2,6683 HBL1_DMSO_200M_050219_2,6683,AVVTQVNKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6684 35.545 350.0 237760.0 25 0 18158.0 25398 NDSHTWVTV 9 111 529.7480028777774 1057.4814528223546 2 529.7481567263603 MULTI CID FTMS 0 0 0 6682 194462.828125 0.5052489683407997 3 -0.0696525573730468 2 Unmodified _NDSHTWVTV_ ENSG00000121898|ENST00000241305|CPXM2;ENST00000368854.7_1_10:125528237-125699754:-|nuORF 16.942295170755138 0.3780752226737986 4 [DN]SSSQ 6 6 29.359 0.0 0.0 2.7763 0.0 0.0 0.0 436.2358797662719 436.2358797662719 5.858565581929653 0.0 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 [DN]SSSQ 2.7763 - 392 + 1 2.211 69579.2 1.0 2372 4310 6682 HBL1_DMSO_200M_050219_2,6684 HBL1_DMSO_200M_050219_2,6684,NDSHTWVTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6685 35.55 289.0 270710.0 25 0 20332.0 + 32666 SDAYQTREI 9 96 541.7595519768906 1081.5045510205812 2 541.7594482302666 MULTI CID FTMS 0 0 0 6682 175191.859375 0.0581565281246519 -9 0.4068489074707031 3 Unmodified _SDAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 47.594388314883695 0.0456443387682827 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 8 8 55.399 0.0 0.0 5.1224 0.0 0.0 0.0 199.03508652084184 199.03508652084184 42.10957216750407 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.3807196863200844 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 5.1224 - 470 1 2.211 65471.8 1.0 2373 4310 6682 HBL1_DMSO_200M_050219_2,6685 HBL1_DMSO_200M_050219_2,6685,SDAYQTREI True True SDAYQTREI 35.549997 541.759448230267 57621816.0 6682.0 ENSG00000127914|ENST00000356239|AKAP9;;nc|ENSG00000127914|Q99996-3|AKAP9;;nc|ENSG00000127914|Q99996-6|AKAP9 6.570144971211751 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6686 35.556 342.0 273330.0 25 0 19312.0 -1 GEFNLCCA 8 129 485.69165121425976 969.3687494953195 2 485.6915771365166 MULTI CID FTMS 0 0 0 6682 168541.84375 0.9953839272671636 -4 0.2437896728515625 4 2 Carbamidomethyl (C) _GEFNLC(Carbamidomethyl (C))C(Carbamidomethyl (C))A_ ENST00000366592.7_2_1:236306173-236341839:+|nuORF 18.13498045792455 0.6430038125133779 4 {[DA]|[EG]}{M(Oxidation (M))|F} 3 -1 33.557 0.0 0.0 3.4617 0.0 0.0 0.0 633.2117403619749 633.2117403619749 18.66196879911484 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F} 3.4617 + + 333 + 1 2.211 73847.4 1.0 2374 4310 6682 HBL1_DMSO_200M_050219_2,6686 HBL1_DMSO_200M_050219_2,6686,GEFNLCCA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6688 35.561 13.0 5059700.0 25 0 668110.0 + 3261 AYGPPTRAV 9 60 466.2535885521363 930.4926241710726 2 466.2535888552666 MULTI CID FTMS 0 0 0 6687 4320968.5 0.829599803014209 -3 0.1500282287597656 1 Unmodified _AYGPPTRAV_ ENSG00000084463|ENST00000261167|WBP11 17.11289562659939 0.3734572693229295 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5 4 49.961 0.0 0.0 5.3693 0.0 0.0 0.0 442.2435396783813 442.2435396783813 42.97106248532352 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5.3693 + + 28 + 1 2.211 57788.8 1.0 2375 4311 6687 HBL1_DMSO_200M_050219_2,6688 HBL1_DMSO_200M_050219_2,6688,AYGPPTRAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6689 35.564 171.0 346150.0 25 0 47659.0 + 5066 DGYEQAARV 9 94 504.7409398526873 1007.4673267721746 2 504.7415344119072 MULTI CID FTMS 0 0 0 6687 218773.703125 0.0007501186589147 74 -3.2492408752441406 2 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 41.8396318013385 0.0653578398400075 4 EQAARV 6 3 44.921 0.0 0.0 4.4588 0.0 0.0 335.1119536090659 0.0 335.1119536090659 0.0 26.98890114944096 0.0 0.0 0 0.5649093276264391 0.0 0.4247425010840047 0.7302046884880937 + EQAARV 4.4588 + + 111 + 1 2.211 52738.6 1.0 2376 4311 6687 HBL1_DMSO_200M_050219_2,6689 HBL1_DMSO_200M_050219_2,6689,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6691 35.57 204.0 314380.0 25 0 41614.0 + 10514 FVDEGKATV 9 85 483.25070201846495 964.48685110373 2 483.2502624392509 MULTI CID FTMS 0 0 0 6690 174339.265625 0.2249228554027746 -6 0.2741317749023437 1 Unmodified _FVDEGKATV_ ENSG00000165501|ENST00000298288|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF;nc|ENSG00000165501|Q96L50-2|LRR1 34.40172386719151 0.1061884637610825 4 {[DA]|[EG]}AKDTV{M(Oxidation (M))|F}V 9 7 + 35.353 0.0 0.0 3.6655 3.6655 74.272 0.0 0.0 0.0 10.106051598226273 4.17786650315956 4.17786650315956 7.447274948966935 0 0.1150219788552205 1.3010299956639813 0.7302046884880937 0.0 {[DA]|[EG]}AKDTV{M(Oxidation (M))|F}V;{[DA]|[EG]}A[TA]ATV{M(Oxidation (M))|F}V;{[SA]|[TG]}{I|L}NDTV{M(Oxidation (M))|F}V;{[DA]|[EG]}AKDVT{M(Oxidation (M))|F}V;[KG][TA][{M(Oxidation (M))|F}V]D{NN|[MP]|[D{I|L}]|[EV]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KDTV{M(Oxidation (M))|F}V;{[SA]|[TG]}[KA][{M(Oxidation (M))|F}V]D{NN|[MP]|[D{I|L}]|[EV]};[KG]{[CP]|[EA]}DTV{M(Oxidation (M))|F}V;[TA]VNDTV{M(Oxidation (M))|F}V;{[DA]|[EG]}A[TA]AVT{M(Oxidation (M))|F}V 3.6655;2.8934;2.4681;2.464;2.4619;2.3696;2.0493;1.9734;1.917;1.6918 -;-;-;-;-;-;-;-;-;- 372 1 2.211 54821.6 1.0 2377 4312 6690 HBL1_DMSO_200M_050219_2,6691 HBL1_DMSO_200M_050219_2,6691,FVDEGKATV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6692 35.573 111.0 578360.0 25 0 36256.0 + 34247 SLQADAHLT 9 97 478.24655220525705 954.478551477314 2 478.2467834353447 MULTI CID FTMS 0 0 0 6690 205721.421875 0.9513404976545924 -1 0.0079345703125 2 Unmodified _SLQADAHLT_ REV__ENSG00000081803|ENST00000449022|CADPS2 19.256988751693697 0.3154191944385105 4 {[VA]|[{I|L}G]}{[SA]|[TG]}HAAT{I|L}D 10 -1 + 51.891 0.0 0.0 5.4365 5.4365 75.905 0.0 0.0 0.0 3.222192947339196 12.23242737174388 3.222192947339196 3.222192947339196 0 0.0 2.0 0.6307196863200843 0.0 {[VA]|[{I|L}G]}{[SA]|[TG]}HAAT{I|L}D;[{I|L}T]NHAAT{I|L}D;{[TV]|[{I|L}S]}QHAAT{I|L}D;[QT]VHAAT{I|L}D;{[VA]|[{I|L}G]}{[SA]|[TG]}HAADT{I|L};[{I|L}T]GGHAAT{I|L}D;[{I|L}T]NHAADT{I|L};{[TV]|[{I|L}S]}[AG]HAAT{I|L}D;{[VA]|[{I|L}G]}{[SA]|[TG]}H{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}D;{[TV]|[{I|L}S]}QHAADT{I|L} 5.4365;5.0989;4.5019;4.3059;4.155;4.1342;3.8174;3.5372;3.4185;3.2203 -;-;-;-;-;-;-;-;-;- 798 1 2.211 56663.9 1.0 2378 4312 6690 HBL1_DMSO_200M_050219_2,6692 HBL1_DMSO_200M_050219_2,6692,SLQADAHLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6693 35.586 800.0 86121.0 25 0 6621.7 + 6875 SVEGEGEEEGEEY 13 102 721.7751699598778 1441.5357869865554 2 721.7769653201103 MULTI CID FTMS 0 0 0 6690 113189.1875 0.9950807835169057 3 -0.0592880249023437 3 Unmodified _EEEKEQDEDEY_ ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000123416|ENST00000336023|TUBA1B;nc|ENSG00000123416|P68363-2|TUBA1B 13.90604991867851 0.7458848613461305 4 EEGEGEWE 8 6 47.851 0.0 0.0 3.3195 0.0 0.0 0.0 493.1721754965742 493.1721754965742 18.23699398973 0.0 0.0 0.0 0 0.0 0.9208187539523752 2.5356668758921828 0.0 EEGEGEWE 3.3195 - 2109 1 2.211 58507.0 0.5799999833106995 2379 4312 6690 HBL1_DMSO_200M_050219_2,6693 HBL1_DMSO_200M_050219_2,6693,EEEKEQDEDEY False False SVEGEGEEEGEEY 35.586499 721.77696532011 906594.9375 6690.0 ENSG00000167552|ENST00000301071|TUBA1A;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;ENSG00000123416|ENST00000336023|TUBA1B;;nc|ENSG00000123416|P68363-2|TUBA1B 5.7278666496276855 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6694 35.596 557.0 173290.0 25 0 12999.0 + -1 AEYCLNCAL 9 134 528.7280850326672 1055.4416171321343 2 528.7281982302666 MULTI CID FTMS 0 0 0 6690 111434.796875 0.6456969708273153 3 -0.0592880249023437 4 Carbamidomethyl (C) _AEYC(Carbamidomethyl (C))LNCAL_ REV__ENSG00000145246|ENST00000273859|ATP10D 16.942295170755138 0.3780752226737986 4 CNPK{I|L} 5 -1 23.276 0.0 0.0 2.2054 0.0 0.0 482.14426713389054 0.0 482.14426713389054 0.0 0.4625711568515029 0.0 0.0 0 0.0 0.0 0.0 0.0 CNPK{I|L} 2.2054 - 718 + 1 2.211 79812.1 1.0 2380 4312 6690 HBL1_DMSO_200M_050219_2,6694 HBL1_DMSO_200M_050219_2,6694,AEYCLNCAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6695 35.603 403.0 234650.0 25 0 19223.0 + + 25276 MVYDGHQHI 9 121 367.17213747306016 1098.4945830193806 3 367.1719848513603 MULTI CID FTMS 0 0 0 6690 110821.5859375 0.893888100107259 -5 0.218841552734375 5 Unmodified _MVYFVYMF_ ENSG00000171097|ENST00000302586|KYAT1;nc|ENSG00000286112|Q16773-3|KYAT1;ENST00000462722.5_1_9:131598322-131644289:-|nuORF;ENST00000483599.5_1_9:131598322-131607768:-|nuORF;nc|ENSG00000286112|Q16773-2|KYAT1 6.354104778181461 0.7857632046190106 4 {[ET]|[MV]}YD 4 -1 18.333 0.0 0.0 1.6689 0.0 0.0 0.0 587.2696016900999 587.2696016900999 5.094830382621796 0.0 0.0 0.0 0 0.2134679910804404 0.0 0.0 0.0 {[ET]|[MV]}YD 1.6689 - 157 + 1 2.211 81809.7 1.0 2381 4312 6690 HBL1_DMSO_200M_050219_2,6695 HBL1_DMSO_200M_050219_2,6695,MVYFVYMF False False MVYDGHQHI 35.60348 367.17198485136 688144.75 6690.0 ENSG00000171097|ENST00000302586|KYAT1;;nc|ENSG00000286112|Q16773-3|KYAT1;;ENST00000462722.5_1_9:131598322-131644289:-|nuORF;;ENST00000483599.5_1_9:131598322-131607768:-|nuORF;;nc|ENSG00000286112|Q16773-2|KYAT1 5.91864808400472 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6698 35.624 800.0 201850.0 25 0 13888.0 + 45218 YQYSPQNQHV 10 161 632.2936900093617 1262.5728270855234 2 632.2913085818291 MULTI CID FTMS 0 0 0 6697 114175.65625 0.9007094685688136 -1 0.0038986206054687 1 Unmodified _YQYSPQNQHV_ ENSG00000144802|ENST00000326172|NFKBIZ;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ 53.832793166522166 0.0576554960245129 4 [Q{I|L}]S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VSY{[WS]|[C(Carbamidomethyl (C)){I|L}]} 10 9 + 42.487 0.0 0.0 3.3651 3.3651 66.839 0.0 0.0 0.0 0.4949425463913215 -2.7051848890561985 -2.7051848890561985 2.5457414737377 0 1.1861818737241734 0.0 1.2544321917401078 0.8371804965004639 [Q{I|L}]S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VSY{[WS]|[C(Carbamidomethyl (C)){I|L}]};[Q{I|L}]SE{M(Oxidation (M))|F}SYVQY;{[QS]|[NT]}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VSY{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[TV]|[{I|L}S]}Q{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VSY{[WS]|[C(Carbamidomethyl (C)){I|L}]};[Q{I|L}]SE{M(Oxidation (M))|F}SVYQY;[{I|L}P][DN]G[QP]SY{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[ES]|[DT]|[{I|L}C]}{I|L}Q{M(Oxidation (M))|F}SYVQY;{[QS]|[NT]}{I|L}E{M(Oxidation (M))|F}SYVQY;{[TV]|[{I|L}S]}QE{M(Oxidation (M))|F}SYVQY;{[ES]|[DT]|[{I|L}C]}{I|L}Q{M(Oxidation (M))|F}SVYQY 3.3651;3.1635;3.0106;2.9981;2.9878;2.8813;2.8706;2.8089;2.7965;2.6949 -;-;-;-;-;-;-;-;-;- 4839 1 2.211 120428.6 0.7599999904632568 2382 4314 6697 HBL1_DMSO_200M_050219_2,6698 HBL1_DMSO_200M_050219_2,6698,YQYSPQNQHV True True YQYSPQNQHV 35.623505 632.29 1107039.125 6697.0 ENSG00000144802|ENST00000326172|NFKBIZ;;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ 7.385863939921061 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6701 35.643 792.0 175380.0 25 0 47042.0 -1 0 95 630.3248878687031 629.317611402103 1 630.3237792849541 MULTI CID FTMS 0 0 0 6700 138256.375 0.672400399014152 -1 0.0037689208984375 1 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AAPQ 6 -1 + 36.26 0.0 0.0 5.7617 5.7617 87.124 0.0 0.0 0.0 2.174165578762484 21.009687899773496 2.174165578762484 13.262551614495344 0 0.8807196863200843 0.6989700043360187 0.3807196863200844 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AAPQ;[TP]{[RE]|[WV]}Q 5.7617;3.6543 -;- 64 1 2.211 106605.6 1.0 2383 4316 6700 HBL1_DMSO_200M_050219_2,6701 HBL1_DMSO_200M_050219_2,6701, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6702 35.646 121.0 362060.0 25 0 46381.0 -1 0 65 472.2762768863494 471.26900041974943 1 472.2750121951103 MULTI CID FTMS 0 0 0 6700 309934.90625 0.6531189985793654 4 -0.1564903259277343 2 4 V 1 -1 9.6041 0.0 0.0 2.0379 0.0 0.0 354.1899960635955 0.0 354.1899960635955 0.0 9.604093769761874 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.0379 - 3 + 1 2.211 38934.8 1.0 2384 4316 6700 HBL1_DMSO_200M_050219_2,6702 HBL1_DMSO_200M_050219_2,6702, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6703 35.66 800.0 58631.0 25 0 4737.9 -1 0 65 661.0855659535148 3300.391447434574 5 661.2888061404228 MULTI CID FTMS 0 0 0 6700 161650.484375 0.9343724028605496 2 -0.0856552124023437 3 4 {I|L}{M(Oxidation (M))|F}[YG]{[{M(Oxidation (M))|F}D]|MM}{I|L}{[QS]|[NT]} 9 -1 13.222 0.0 0.0 0.40063 0.0 0.0 2211.900430979372 0.0 2211.900430979372 0.0 4.409999832893591 0.0 0.0 0 0.0 0.0 0.0 0.6109243748081782 {I|L}{M(Oxidation (M))|F}[YG]{[{M(Oxidation (M))|F}D]|MM}{I|L}{[QS]|[NT]} 0.40063 - 214 + 1 2.211 45582.6 0.9300000071525574 2385 4316 6700 HBL1_DMSO_200M_050219_2,6703 HBL1_DMSO_200M_050219_2,6703, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6704 35.673 800.0 192680.0 25 0 39535.0 + 21118 LPAPFAAPPV 10 132 490.2855782082544 978.5566034833088 2 490.2851745486259 MULTI CID FTMS 0 0 0 6700 92772.109375 0.3733126107025274 -8 0.2210197448730468 4 Unmodified _LPAPFAAPPV_ REV__ENSG00000179094|ENST00000317276|PER1 12.531546534597751 0.6372748319968624 4 TAP{I|L}[TA] 6 -1 28.99 0.0 0.0 2.9625 0.0 0.0 406.2479619811588 0.0 406.2479619811588 0.0 6.799759777929154 0.0 0.0 0 0.0 0.0 0.9604093769761874 0.0 TAP{I|L}[TA] 2.9625 - 685 + 1 2.211 120314.2 0.699999988079071 2386 4316 6700 HBL1_DMSO_200M_050219_2,6704 HBL1_DMSO_200M_050219_2,6704,LPAPFAAPPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6706 35.69 800.0 216850.0 25 0 15628.0 + 18027 KSLEHSPTSM 10 164 558.7721678036372 1115.5297826740743 2 558.7703124880791 MULTI CID FTMS 0 0 0 6705 210527.4375 0.4764867866413799 -2 0.0498886108398437 1 Unmodified _KSLEHSPTSM_ REV__ENSG00000181143|ENST00000397910|MUC16 32.78568957990786 0.2337485590374503 4 [YT]{I|L}RSTGTSM 10 -1 + 76.57 0.0 0.0 6.864 6.864 85.141 0.0 0.0 0.0 22.29696243879616 64.05166332099336 22.29696243879616 6.020599913279625 0 2.031718309096375 2.0 1.066901560044258 0.0 [YT]{I|L}RSTGTSM;[YT]{I|L}RSGTTSM;[YT]{I|L}RS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SM;{[MS]|[{M(Oxidation (M))|F}A]}[KQ]Y{I|L}ESM;{[MG]|[TS]}{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}YTSM;{[MG]|[TS]}{[QV]|[N{I|L}]|[RA]|[KV]}[YV]TTSM;{[MG]|[TS]}{[NV]|[RG]}[{I|L}T]YTSM;TY{[CA]|SS}GSRVYP;TY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VSQQP;TY{[CA]|SS}GSR{I|L}[{M(Oxidation (M))|F}V] 6.864;6.3243;4.6046;3.7401;3.236;2.8707;2.8422;2.8296;2.8093;2.6654 -;-;-;-;-;-;-;-;-;- 3442 1 2.211 133170.4 0.5299999713897705 2387 4317 6705 HBL1_DMSO_200M_050219_2,6706 HBL1_DMSO_200M_050219_2,6706,KSLEHSPTSM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6707 35.699 498.0 220390.0 25 0 8216.4 + 38279 TQADWQHRV 9 134 380.8561169402895 1139.5465214210683 3 380.8558837771416 MULTI CID FTMS 0 0 0 6705 118136.921875 0.7776614603234684 -1 0.0461196899414062 2 Unmodified _TQADWQHRV_ ENSG00000166199|ENST00000302708|ALKBH3;ENST00000532962.5_1_11:43918877-43941557:+|nuORF 24.881564428377168 0.2146028316269493 4 [QT]ADWQH[RV] 9 0 + 49.682 0.0 0.0 4.3598 4.3598 78.992 0.0 0.0 0.0 40.21780875296074 8.039011023977032 8.039011023977032 9.208187539523747 0 0.3807196863200844 0.0 0.0 1.0010912013506126 + + [QT]ADWQH[RV];[QT]ADW[AG]H[RV];[QT]W{[DA]|[EG]}QH[RV];[EP]RRWDA[NP];[QT]W{[DA]|[EG]}[AG]H[RV];[WD][PG][R{I|L}]W[NP];[EP]RR{[DA]|[EG]}W[NP];[PG]{M(Oxidation (M))|F}[PG][R{I|L}]DA[NP];{[HG]|PP}[C(Carbamidomethyl (C))R][{I|L}T]DA[NP];[PG][WD][R{I|L}]W[NP] 4.3598;3.5517;2.9785;2.6441;2.1704;1.5117;1.2628;1.1635;1.0528;0.89075 +;-;-;-;-;-;-;-;-;- + 230 + 1 2.211 95560.6 1.0 2388 4317 6705 HBL1_DMSO_200M_050219_2,6707 HBL1_DMSO_200M_050219_2,6707,TQADWQHRV False True TQADWQHRV 35.699086 380.855883777142 894312.625 6705.0 ENST00000532962.5_1_11:43918877-43941557:+|nuORF;;ENSG00000166199|ENST00000302708|ALKBH3 7.114614645640056 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6708 35.713 800.0 104880.0 25 0 5039.9 + 41839 VPYGNAQEQNV 11 129 609.7907900344259 1217.5670271356516 2 609.7904540896416 MULTI CID FTMS 0 0 0 6705 89692.328125 0.7838758855340625 1 -0.0395355224609375 3 Unmodified _VPYGNAQEQNV_ ENSG00000216490|ENST00000407280|IFI30;ENST00000600463.1_1_19:18285864-18288180:+|nuORF 45.739877483867886 0.1412225664835785 4 [DV]QSTAQEQD 10 6 59.152 0.0 0.0 4.8582 0.0 0.0 0.0 113.07548525328994 113.07548525328994 46.05295181285973 0.0 0.0 0.0 0 0.9604093769761876 0.744727494896694 0.0 1.5189301784845295 [DV]QSTAQEQD 4.8582 - 2040 1 2.211 71722.0 0.550000011920929 2389 4317 6705 HBL1_DMSO_200M_050219_2,6708 HBL1_DMSO_200M_050219_2,6708,VPYGNAQEQNV False True VPYGNAQEQNV 35.712923 609.790454089642 978561.1875 6705.0 ENSG00000216490|ENST00000407280|IFI30;;ENST00000600463.1_1_19:18285864-18288180:+|nuORF 6.633791923522949 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6710 35.718 139.0 618240.0 25 0 55052.0 + 41293 VPHTRPVSL 9 111 335.8665827678017 1004.577918903605 3 335.8659850955009 MULTI CID FTMS 0 0 0 6709 379241.34375 0.6651341084785269 5 -0.1272926330566406 1 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 38.17557092003332 0.0854718145212029 4 SP{I|L}V 4 7 35.222 0.0 0.0 3.5061 0.0 0.0 590.3302714469853 0.0 590.3302714469853 0.0 19.023722004121453 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 SP{I|L}V 3.5061 - 172 1 2.211 74452.5 1.0 2390 4318 6709 HBL1_DMSO_200M_050219_2,6710 HBL1_DMSO_200M_050219_2,6710,VPHTRPVSL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6711 35.732 800.0 124240.0 25 0 4397.1 -1 ISPSRMPQPPN 11 124 620.3133317599178 1238.6121105866357 2 620.8134033083916 MULTI CID FTMS 0 0 0 6709 106287.796875 0.3693044192624964 43 -1.90020751953125 2 Oxidation (M) _ISPSRM(Oxidation (M))PQPPN_ ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP 14.40537977576856 0.7354982482299568 4 {[HG]|PP}AMGHPPP[QP]N 12 -1 {[HG]|PP}AM + + 59.32 13.188 3.3287 4.7893 4.7893 51.621 0.0 0.0 0.0 0.0 37.05743023600581 0.0 0.0 0 1.805462187404089 0.0 0.0 1.3129529932484498 {[HG]|PP}AMGHPPP[QP]N 4.7893 - 1979 + 1 2.211 78468.6 0.7300000190734863 2391 4318 6709 HBL1_DMSO_200M_050219_2,6711 HBL1_DMSO_200M_050219_2,6711,ISPSRMPQPPN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6712 35.746 800.0 109090.0 25 0 10884.0 + 6696 ECKECRKCFYQ 11 89 775.8292829351711 1549.6440129371422 2 775.8293945193291 MULTI CID FTMS 0 0 0 6709 111399.8359375 0.3808016169991938 -6 0.148712158203125 3 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 55.50274090549119 0.0873970505193986 4 [HD]EAQAGAQDA{M(Oxidation (M))|F}YQ 14 10 + 118.41 0.0 0.0 7.6409 7.6409 83.633 0.0 0.0 0.0 0.4937152568888621 75.45570305340658 0.4937152568888621 3.187587626244124 0 1.8252574989159955 0.0 1.079689690656103 2.329689690656103 [HD]EAQAGAQDA{M(Oxidation (M))|F}YQ;[HD][QA]EAGAQDA{M(Oxidation (M))|F}YQ;[HD]EAQAQQDA{M(Oxidation (M))|F}YK;[YE][C(Carbamidomethyl (C))K]AGAQDA{M(Oxidation (M))|F}YQ;[HD]EAQQAQDA{M(Oxidation (M))|F}YQ;[HD][QA]EAQQDA{M(Oxidation (M))|F}YK;[HD]EAQAGA[AG]DA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]AQQDA{M(Oxidation (M))|F}YK;[HD][QA]EQAQDA{M(Oxidation (M))|F}YK;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QAGAQDA{M(Oxidation (M))|F}YQ 7.6409;7.4352;7.4049;7.2798;7.2106;7.1992;7.0569;7.0454;7.0049;6.9436 -;-;-;-;-;-;-;-;-;- 5468 1 2.211 66208.9 0.5600000023841858 2392 4318 6709 HBL1_DMSO_200M_050219_2,6712 HBL1_DMSO_200M_050219_2,6712,ECKECRKCFYQ True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6713 35.759 800.0 137990.0 25 0 15541.0 + 18467 KYIGYARQY 9 118 581.3069679991207 1160.5993830650414 2 581.8105956912041 MULTI CID FTMS 0 0 0 6709 107217.2109375 0.6579175259491402 -6 0.148712158203125 4 Unmodified _KYIGYARQY_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 29.081581746732265 0.1611639662936252 4 [YK]{I|L}GYARYQ 9 2 + 42.626 0.0 0.0 3.6728 3.6728 80.347 0.0 0.0 0.0 5.642492736872597 11.423329158756658 5.642492736872597 20.828825250701748 0 0.8807196863200843 0.0 0.0 0.2215141619232908 [YK]{I|L}GYARYQ;[YK]{I|L}GYA[HV]PN;[YK]{I|L}[YQ]RYQ;[YK]{I|L}GYA[RH][PG];[YK]{I|L}G{[CP]|[EA]}[KP]QQ;[YK]{I|L}GYA[HV]G[PG];[YK]YY[R{I|L}]QQ 3.6728;1.8781;1.7584;1.6752;1.5232;1.282;0.038461 -;-;-;-;-;-;- 347 + 1 2.211 84389.6 0.5799999833106995 2393 4318 6709 HBL1_DMSO_200M_050219_2,6713 HBL1_DMSO_200M_050219_2,6713,KYIGYARQY False True KYIGYARQY 35.759477 581.810595691204 1421800.875 6709.0 ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;nc|ENSG00000125885|Q9UJA3-2|MCM8 4.283226807912191 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6715 35.764 10.0 5168000.0 25 0 752640.0 + 5788 DPPPGSHVI 9 67 459.7377035282235 917.460854123247 2 459.7377502322197 MULTI CID FTMS 0 0 0 6714 6090193.0 0.620236146665211 11 -0.2699356079101562 1 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 42.09456458481378 0.0639583784996157 4 [DP]P 3 6 44.091 0.0 0.0 4.8058 0.0 0.0 0.0 605.3054335512345 605.3054335512345 34.21426330358688 0.0 0.0 0.0 0 1.0 2.0 0.6643943297944485 0.0 + [DP]P 4.8058 + + 94 1 2.201 45399.0 1.0 2394 4319 6714 HBL1_DMSO_200M_050219_2,6715 HBL1_DMSO_200M_050219_2,6715,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6716 35.765 32.0 1577200.0 25 0 166460.0 + 35486 STMSTNGIPR 10 68 532.2639720813365 1062.513391229473 2 532.2639648318291 MULTI CID FTMS 0 0 0 6714 1684538.0 0.5112383791301693 3 -0.0612297058105468 2 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 34.93206674587334 0.2110832994570416 4 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 10 2 + 52.14 0.0 0.0 4.9072 4.9072 75.863 0.0 0.0 0.0 7.269987279362624 4.771212547196626 4.771212547196626 4.771212547196626 0 0.5 0.0 0.0 0.3494850021680094 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MST{[QN]|[E{I|L}]|[KN]}VVP;{[MG]|[TS]}MST[{I|L}P]{[ET]|[MV]}P;{[MG]|[TS]}MST[{I|L}P][NG]R 4.9072;4.4582;4.0447;3.5956;2.6478;2.5303;2.0812 -;+;-;-;-;-;- + 127 + 1 2.201 44073.6 1.0 2395 4319 6714 HBL1_DMSO_200M_050219_2,6716 HBL1_DMSO_200M_050219_2,6716,STMSTNGIPR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6717 35.77 266.0 294150.0 25 0 23645.0 + 11214 GEPAGEEAET 10 109 495.20671805332273 988.3988831734456 2 495.2072936892509 MULTI CID FTMS 0 0 0 6714 252616.375 0.7138309197889446 5 -0.0845756530761718 3 Unmodified _GEPAGEEAET_ REV__ENSG00000159212|ENST00000349499|CLIC6;REV__nc|ENSG00000159212|Q96NY7|CLIC6 24.020572477871973 0.4289996903560794 4 {[DA]|[EG]}PAPTP 7 -1 47.044 0.0 0.0 4.7596 0.0 0.0 0.0 336.0700777643188 336.0700777643188 -4.317949115704209 0.0 -4.317949115704209 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {[DA]|[EG]}PAPTP 4.7596 - 256 + 1 2.201 65533.3 1.0 2396 4319 6714 HBL1_DMSO_200M_050219_2,6717 HBL1_DMSO_200M_050219_2,6717,GEPAGEEAET False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6718 35.778 423.0 292740.0 25 0 19290.0 + 33475 SIHENFSQA 9 154 516.7407472307019 1031.4669415282035 2 516.7407714724541 MULTI CID FTMS 0 0 0 6714 251215.28125 0.6524391203970105 -5 0.1521186828613281 4 Unmodified _SIHENFSQA_ ENSG00000125633|ENST00000376300|CCDC93 88.95385435242217 0.0153473310052057 4 {[TV]|[{I|L}S]}HEN{M(Oxidation (M))|F}SQA 9 0 + 63.72 0.0 0.0 6.1776 6.1776 89.236 0.0 0.0 0.0 15.678936295970352 7.464825806156249 7.464825806156249 15.075156255085387 0 0.7689301784845296 1.5228787452803376 1.4634679910804405 0.5866968715561641 + + {[TV]|[{I|L}S]}HEN{M(Oxidation (M))|F}SQA;{[TV]|[{I|L}S]}HEGG{M(Oxidation (M))|F}SQA;{[CP]|[EA]}S[RH]{M(Oxidation (M))|F}SQA;{[YC]|[HE]}N{M(Oxidation (M))|F}S{I|L}SQA;{[TV]|[{I|L}S]}H[CS]S{I|L}SQA;{[YC]|[HE]}{[TV]|[{I|L}S]}N{M(Oxidation (M))|F}SQA;{[YC]|[HE]}NVT{M(Oxidation (M))|F}SQA;{[TV]|[{I|L}S]}HNT{M(Oxidation (M))|F}DQA;{[YC]|[HE]}GG{M(Oxidation (M))|F}S{I|L}SQA;{[CP]|[EA]}S[HK]{M(Oxidation (M))|F}DQA 6.1776;4.7161;4.6576;4.2673;4.2643;4.0303;3.8059;3.5272;3.0592;2.969 +;-;-;-;-;-;-;-;-;- + 1046 1 2.201 97743.4 1.0 2397 4319 6714 HBL1_DMSO_200M_050219_2,6718 HBL1_DMSO_200M_050219_2,6718,SIHENFSQA True True SIHENFSQA 35.777681 516.740771472454 2305036.5 6714.0 ENSG00000125633|ENST00000376300|CCDC93 8.269877115885416 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6719 35.784 330.0 270780.0 25 0 28675.0 + 15352 IPMEDRHNI 9 116 562.779541119484 1123.5445293057678 2 562.7796508669853 MULTI CID FTMS 0 0 0 6714 209110.046875 0.9235039876916216 -1 0.0466156005859375 5 Unmodified _IPMEDRHNI_ ENSG00000175305|ENST00000308108|CCNE2;nc|ENSG00000175305|O96020-2|CCNE2 32.78568957990786 0.1150597335874693 4 {I|L}PMED[RH]QV 9 2 + 63.529 0.0 0.0 5.6543 5.6543 82.898 0.0 0.0 0.0 47.60889342430126 5.327600179775089 5.327600179775089 8.804458880789916 0 0.3252574989159953 2.0 0.0 0.8494850021680094 {I|L}PMED[RH]QV;{I|L}PME[RP]{[SA]|[TG]}HS;{I|L}PME[TP]{[NV]|[RG]}HS;{I|L}PMED[RH][AG]V;{I|L}P{I|L}Q{[C(Carbamidomethyl (C))G]|[NC]}NVHS;{I|L}{I|L}DE[TP]{[NV]|[RG]}HS;{I|L}{I|L}PQ{[C(Carbamidomethyl (C))G]|[NC]}NVHS 5.6543;4.8707;4.6732;4.4567;4.0034;2.6746;2.0047 -;-;-;-;-;-;- 353 + 1 2.201 73053.8 1.0 2398 4319 6714 HBL1_DMSO_200M_050219_2,6719 HBL1_DMSO_200M_050219_2,6719,IPMEDRHNI True True IPMEDRHNI 35.783685 562.779650866985 1875248.125 6714.0 nc|ENSG00000175305|O96020-2|CCNE2;;ENSG00000175305|ENST00000308108|CCNE2 5.705235322316487 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6721 35.8 800.0 80327.0 25 0 4004.8 5929 DQAMMQDCYS 10 121 596.2096007698134 1190.4046486064267 2 596.2095825076103 MULTI CID FTMS 0 0 0 6720 94543.609375 0.3668825938179572 7 -0.1376152038574218 1 Unmodified _DQAMMQDCYS_ ENSG00000157106|ENST00000446231|SMG1;ENST00000562668.1_16:18859095-18860659:-|nuORF;nc|ENSG00000157106|Q96Q15-2|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1 8.155526934196011 0.6889124077178598 4 [QA]DP 4 7 31.427 0.0 0.0 2.64 0.0 0.0 0.0 776.2055878976954 776.2055878976954 16.73393743112328 0.0 0.0 0.0 0 1.0 0.0 0.0 0.7614393726401688 [QA]DP 2.64 - 171 1 2.201 53343.4 0.6299999952316284 2399 4320 6720 HBL1_DMSO_200M_050219_2,6721 HBL1_DMSO_200M_050219_2,6721,DQAMMQDCYS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6722 35.808 454.0 260350.0 25 0 19080.0 + 14275 IEHYPIEV 8 176 500.2603196605994 998.5060863879988 2 500.2589599490166 MULTI CID FTMS 0 0 0 6720 174428.703125 0.6660929251265798 -11 0.2926139831542969 2 Unmodified _IEHYPIEV_ REV__ENSG00000013523|ENST00000251089|ANGEL1 30.22481116460888 0.4082965392918993 4 {I|L}SEV 4 -1 39.95 0.0 0.0 4.001 0.0 0.0 552.2695109155517 0.0 552.2695109155517 0.0 24.742364975308224 0.0 0.0 0 0.6022338482433752 0.0 0.5 0.0 {I|L}SEV 4.001 - 1126 1 2.201 88239.2 1.0 2400 4320 6720 HBL1_DMSO_200M_050219_2,6722 HBL1_DMSO_200M_050219_2,6722,IEHYPIEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6724 35.812 22.0 2547300.0 25 0 260340.0 + 32667 SDAYQTREI 9 64 541.7595519768906 1081.5045510205812 2 541.7596313357353 MULTI CID FTMS 0 0 0 6723 2678502.5 0.8891532205258929 2 -0.0322456359863281 1 Unmodified _SDAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 40.23920728925047 0.0741434193262949 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 8 8 55.187 0.0 0.0 5.1028 0.0 0.0 0.0 199.03546339464108 199.03546339464108 37.457676322403366 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.4247425010840047 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 5.1028 - 224 1 2.201 47480.5 1.0 2401 4321 6723 HBL1_DMSO_200M_050219_2,6724 HBL1_DMSO_200M_050219_2,6724,SDAYQTREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6725 35.821 444.0 281750.0 25 0 27802.0 + 43790 YENEVALRQ 9 135 561.2831797001986 1120.5518064671971 2 561.2839233279228 MULTI CID FTMS 0 0 0 6723 190303.15625 0.1665295442291917 -8 0.2044486999511718 2 Unmodified _YENEVALRQ_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 118.0683919894846 0.0022886718041725 4 YENEVA{I|L}RQ 9 0 + 130.72 0.0 0.0 11.665 11.665 92.425 0.0 0.0 0.0 36.47817481888637 11.95046257204389 11.95046257204389 8.26606256887672 0 1.5044321917401078 2.0 1.048455006504028 1.960409376976188 + + YENEVA{I|L}RQ;YEQDVA{I|L}RQ;YEGGEVA{I|L}RQ;YE[AG]DVA{I|L}RQ;{[QD]|[EN]|[WG]|[KD]|[RS]}VA[R{I|L}]EQY;{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}{I|L}NEQY;{[QD]|[EN]|[WG]|[KD]|[RS]}VWW{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}VA[R{I|L}]QEY;{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}{I|L}NQEY;{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}{I|L}QDQY 11.665;10.928;10.844;10.106;1.376;1.3352;1.2983;1.2645;1.2237;1.0665 +;-;-;-;-;-;-;-;-;- + 766 + 1 2.201 94788.9 1.0 2402 4321 6723 HBL1_DMSO_200M_050219_2,6725 HBL1_DMSO_200M_050219_2,6725,YENEVALRQ True True YENEVALRQ 35.820701 561.283923327923 16452122.0 6723.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 7.956160704294841 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 6727 35.825 31.0 1966400.0 25 0 240950.0 + 3262 AYGPPTRAV 9 54 466.2535885521363 930.4926241710726 2 466.2535583376884 MULTI CID FTMS 0 0 0 6726 1975019.25 0.379191743876233 8 -0.2087059020996093 1 Unmodified _AYGPPTRAV_ ENSG00000084463|ENST00000261167|WBP11 17.11289562659939 0.3734572693229295 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5 4 51.466 0.0 0.0 5.531 0.0 0.0 0.0 442.24118982486567 442.24118982486567 44.47621246364342 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5.531 + + 38 + 1 2.202 52535.4 1.0 2403 4322 6726 HBL1_DMSO_200M_050219_2,6727 HBL1_DMSO_200M_050219_2,6727,AYGPPTRAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6728 35.828 101.0 578860.0 25 0 100620.0 + 10515 FVDEGKATV 9 74 483.25070201846495 964.48685110373 2 483.2505981326103 MULTI CID FTMS 0 0 0 6726 503902.8125 0.6501074730736751 4 -0.0773506164550781 2 Unmodified _FVDEGKATV_ ENSG00000165501|ENST00000298288|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF;nc|ENSG00000165501|Q96L50-2|LRR1 34.40172386719151 0.1061884637610825 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKATV{M(Oxidation (M))|F}V 9 4 + 40.869 0.0 0.0 4.2374 4.2374 69.285 0.0 0.0 0.0 2.430380486862937 7.1919646325935815 2.430380486862937 2.430380486862937 0 0.1549471895720985 0.0 1.1237125054200234 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKATV{M(Oxidation (M))|F}V;[DV]{[QS]|[NT]}ATV{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}ANDTV{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}[DN]ATV{M(Oxidation (M))|F}V;{[SA]|[TG]}{I|L}NDTV{M(Oxidation (M))|F}V;[KG]{[CP]|[EA]}DTV{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}AGGDTV{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KQ]TV{M(Oxidation (M))|F}V;{[SA]|[TG]}{I|L}GGDTV{M(Oxidation (M))|F}V;[VS][QA]DTV{M(Oxidation (M))|F}V 4.2374;3.9854;2.9427;2.7879;2.6033;2.2471;1.988;1.8054;1.6486;1.6229 -;-;-;-;-;-;-;-;-;- 360 1 2.202 47976.3 1.0 2404 4322 6726 HBL1_DMSO_200M_050219_2,6728 HBL1_DMSO_200M_050219_2,6728,FVDEGKATV True True FVDEGKATV 35.827514 483.25059813261 9430012.0 6726.0 nc|ENSG00000165501|Q96L50-2|LRR1;;ENST00000540712.1_1_14:50068361-50081211:+|nuORF;;ENSG00000165501|ENST00000298288|LRR1 6.721682548522949 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6729 35.83 105.0 748270.0 25 0 90820.0 + 6597 EAPPPPRVV 9 83 481.2772922584121 0 481.2770263552666 PEAK CID FTMS 0 0 0 6726 429777.25 0.8466605477691705 -3 0.0612297058105468 3 Unmodified _EAPPPPRVV_ ENSG00000204116|ENST00000373502|CHIC1;nc|ENSG00000204116|Q5VXU3-2|CHIC1 26.88365393820708 0.1386685954232994 4 PPP 3 6 18.5 0.0 0.0 1.926 0.0 0.0 200.07991122750727 466.2786959283813 666.3586071558886 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + PPP 1.926 + + 30 + 1 2.202 64735.8 1.0 2405 4322 6726 HBL1_DMSO_200M_050219_2,6729 HBL1_DMSO_200M_050219_2,6729,EAPPPPRVV False True EAPPPPRVV 35.829737 481.277026355267 8267929.0 6726.0 ENSG00000204116|ENST00000373502|CHIC1;;nc|ENSG00000204116|Q5VXU3-2|CHIC1 5.725845257441203 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6730 35.836 320.0 305030.0 25 0 42477.0 + 5067 DGYEQAARV 9 120 504.7409398526873 1007.4673267721746 2 504.7411071658134 MULTI CID FTMS 0 0 0 6726 168178.921875 0.0005766421902294 85 -3.9841232299804688 4 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 53.832793166522166 0.0319663582346103 4 [DG]YEQAARV 9 0 + 60.017 0.0 0.0 5.9572 5.9572 85.537 0.0 0.0 0.0 43.36184743377423 8.42728709255362 8.42728709255362 9.208187539523747 0 0.7302046884880937 0.744727494896694 0.4247425010840047 0.5649093276264391 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YV[DN]ARV;[DG]YEQ[R{I|L}]Q;[DG]YEV[NG]RV;[DG]YVE[NG]RV;[DG]YE[AG][R{I|L}]Q 5.9572;5.0433;3.9169;3.8674;3.6225;3.1445;2.9481 +;-;-;-;-;-;- + 207 + 1 2.202 75361.8 1.0 2406 4322 6726 HBL1_DMSO_200M_050219_2,6730 HBL1_DMSO_200M_050219_2,6730,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6731 35.84 248.0 303820.0 25 0 36118.0 17318 KLTEPRKA 8 101 471.7904546623765 941.566356391553 2 471.7904846072197 MULTI CID FTMS 0 0 0 6726 163823.453125 0.7029536292147412 -3 0.0612297058105468 5 Unmodified _KLTEPRKA_ ENSG00000123159|ENST00000393033|GIPC1;ENST00000585606.5_1_19:14590895-14591279:-|nuORF;nc|ENSG00000123159|O14908-2|GIPC1 16.942295170755138 0.6606234159769251 4 {I|L}A[KA] 4 5 24.693 0.0 0.0 2.6225 0.0 0.0 540.3023060276445 0.0 540.3023060276445 0.0 12.474250108400469 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L}A[KA] 2.6225 - 79 1 2.202 60201.8 1.0 2407 4322 6726 HBL1_DMSO_200M_050219_2,6731 HBL1_DMSO_200M_050219_2,6731,KLTEPRKA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6734 35.852 338.0 269810.0 25 0 21165.0 28397 PSPHGLAG 8 112 368.19345383228887 734.3723547313778 2 368.1927368044853 MULTI CID FTMS 0 0 0 6733 140425.234375 0.2579292624323694 -11 0.2405929565429687 1 Unmodified _PSPHGLAG_ ENST00000300976.8_1_19:18780088-18780439:+|nuORF 9.347437153973935 0.7675937258251505 4 {I|L}Q 2 7 29.486 0.0 0.0 4.0151 0.0 0.0 475.2183763151653 0.0 475.2183763151653 0.0 18.065901680703416 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3494850021680094 {I|L}Q 4.0151 - 30 + 1 2.202 73381.8 1.0 2408 4324 6733 HBL1_DMSO_200M_050219_2,6734 HBL1_DMSO_200M_050219_2,6734,PSPHGLAG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6735 35.866 800.0 144320.0 25 0 17219.0 + 2453 AQVKPDGTYV 10 140 539.2830101024816 1076.5514672717632 2 539.2830688357353 MULTI CID FTMS 0 0 0 6733 141098.703125 0.5832311745818305 -5 0.0845756530761718 2 Unmodified _AQVKPDGTYV_ ENSG00000161533|ENST00000293217|ACOX1;ENST00000589744.1_1_17:73949530-73951667:-|nuORF;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1 49.55428908609986 0.0827668555218455 4 [QA]VAEVQAYV 10 5 + 59.034 0.0 0.0 5.4836 5.4836 75.988 0.0 0.0 0.0 3.0747359150982234 8.947340481202062 3.0747359150982234 3.0747359150982234 0 2.311243137115873 0.0 1.4489700043360187 0.3807196863200844 [QA]VAEVQAYV;AAGVAEVQAYV;[QA]VAEV[AG]AYV;AAGVAEV[AG]AYV;[QA]VK[RD]{[{M(Oxidation (M))|F}D]|MM}V;{[VA]|[{I|L}G]}QAEVQAYV;[PG]{[ES]|[DT]|[{I|L}C]}KVQAYV;[DP]{[SA]|[TG]}KVQAYV;[QA]VAEVYV[QA];AAGVAEVYV[QA] 5.4836;5.198;4.6323;4.3501;3.8329;3.7544;3.4882;3.3842;3.1969;2.9113 -;-;-;-;-;-;-;-;-;- 824 1 2.202 95851.2 0.8399999737739563 2409 4324 6733 HBL1_DMSO_200M_050219_2,6735 HBL1_DMSO_200M_050219_2,6735,AQVKPDGTYV True True AQVKPDGTYV 35.866305 539.283068835735 1729165.75 6733.0 ENST00000589744.1_1_17:73949530-73951667:-|nuORF;;nc|ENSG00000161533|Q15067-3|ACOX1;;nc|ENSG00000161533|Q15067|ACOX1;;ENSG00000161533|ENST00000293217|ACOX1 6.557623227437337 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6736 35.88 800.0 378320.0 25 0 62965.0 + 15193 IPEKTVRVV 9 216 347.5537675531369 1039.639473259611 3 347.5534545779228 MULTI CID FTMS 0 0 0 6733 121891.59375 0.6997061813495566 -6 0.1311912536621093 3 Unmodified _IPEKTVRVV_ ENSG00000082438|ENST00000652658|COBLL1;nc|ENSG00000082438|Q53SF7-2|COBLL1;nc|ENSG00000082438|Q53SF7-3|COBLL1 27.628801355627647 0.1796483985696185 4 {I|L}PEKT 5 4 55.113 0.0 0.0 5.3012 0.0 0.0 0.0 468.2951256701042 468.2951256701042 35.883067976439555 0.0 0.0 0.0 0 0.0 0.0604807473813814 1.2302046884880935 0.4247425010840047 + {I|L}PEKT 5.3012 + + 87 + 1 2.202 244484.7 0.6399999856948853 2410 4324 6733 HBL1_DMSO_200M_050219_2,6736 HBL1_DMSO_200M_050219_2,6736,IPEKTVRVV False True IPEKTVRVV 35.88012 347.553454577923 2767312.0 6733.0 nc|ENSG00000082438|Q53SF7-3|COBLL1;;nc|ENSG00000082438|Q53SF7-2|COBLL1;;ENSG00000082438|ENST00000652658|COBLL1 4.612885395685832 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6737 35.894 800.0 97491.0 25 0 6972.6 -1 NLPCLQNKM 9 115 567.277308270834 0 567.2776977419853 PEAK CID FTMS 0 0 0 6733 113834.0 0.8836995028491622 -3 0.0361442565917968 4 Carbamidomethyl (C),Oxidation (M) _NLPC(Carbamidomethyl (C))LQNKM(Oxidation (M))_ ENST00000559323.5_1_15:89011518-89011599:+|nuORF 11.640296217721598 0.2934555500198502 4 VQ 2 -1 13.443 0.0 0.0 1.187 0.0 0.0 695.3110729852243 207.07807336978752 902.3891463550118 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.0 VQ 1.187 - 64 + 1 2.202 68058.3 0.7799999713897705 2411 4324 6733 HBL1_DMSO_200M_050219_2,6737 HBL1_DMSO_200M_050219_2,6737,NLPCLQNKM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6740 35.914 800.0 326770.0 25 0 20587.0 22339 LPSMMSCRTT 10 235 376.1723589227407 1125.4952473684225 3 376.1721374392509 MULTI CID FTMS 0 0 0 6739 144592.53125 0.4838279130800585 -3 0.0579032897949218 1 Unmodified _LPSMMSCRTT_ ENST00000561204.5_1_19:47920462-47921455:-|nuORF 12.240655878213236 0.6421556946785427 4 VP{I|L}{[YC]|[HE]}{[CA]|SS}NP{M(Oxidation (M))|F} 10 8 + 34.903 0.0 0.0 3.1011 3.1011 68.962 0.0 0.0 0.0 8.910865639906028 4.057653461839941 4.057653461839941 4.057653461839941 0 0.3145152305677002 0.8538719643217619 0.0 0.4247425010840047 VP{I|L}{[YC]|[HE]}{[CA]|SS}NP{M(Oxidation (M))|F};VP{I|L}{[YC]|[HE]}{[CA]|SS}N{M(Oxidation (M))|F}P;VP{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}P{M(Oxidation (M))|F};VP{I|L}{[YC]|[HE]}[C(Carbamidomethyl (C))Q]P{M(Oxidation (M))|F};VP{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}P;VP{I|L}{[YC]|[HE]}[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}P;[{I|L}P]TH[NP][{M(Oxidation (M))|F}T]CP;[{I|L}P]DD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PCP;N{I|L}DE[{I|L}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F};N{I|L}DE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T{M(Oxidation (M))|F} 3.1011;2.7406;2.583;2.5207;2.2225;2.1602;1.7604;1.1739;1.1464;1.1389 -;-;-;-;-;-;-;-;-;- 999 + 1 2.202 216607.0 0.8700000047683716 2412 4326 6739 HBL1_DMSO_200M_050219_2,6740 HBL1_DMSO_200M_050219_2,6740,LPSMMSCRTT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6741 35.921 402.0 450460.0 25 0 51127.0 + 24187 LYYRDARSY 9 102 402.8685668765291 1205.5838712297873 3 402.8683959841728 MULTI CID FTMS 0 0 0 6739 183933.25 0.1812810068985084 -5 0.09014892578125 2 Unmodified _LYYRDARSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 29.43715596616401 0.1566398223704148 4 {I|L}YYRDY[WK] 8 4 + 80.17 0.0 0.0 6.6499 6.6499 82.366 0.0 0.0 0.0 36.40978057358332 4.313637641589878 4.313637641589878 4.313637641589878 0 0.2302046884880938 2.0 0.0 1.274227503252014 {I|L}YYRDY[WK];{I|L}YYRDYS{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}YYRD[WK]Y;{I|L}Y{[RE]|[WV]}[WR]{[{M(Oxidation (M))|F}H]|[RQ]};{I|L}[HM][{I|L}T]DY[WK];{I|L}[HM][{I|L}T]DYS{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{[RE]|[WV]}Y[WR]{[{M(Oxidation (M))|F}H]|[RQ]} 6.6499;6.2921;6.1986;3.1445;2.3373;1.984;0.54656 -;-;-;-;-;-;- 294 + 1 2.202 140260.0 1.0 2413 4326 6739 HBL1_DMSO_200M_050219_2,6741 HBL1_DMSO_200M_050219_2,6741,LYYRDARSY False True LYYRDARSY 35.921361 402.868395984173 16231877.0 6739.0 ENSG00000159377|ENST00000290541|PSMB4;;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 5.499703725179036 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6743 35.928 233.0 356930.0 25 0 39501.0 34163 SLMFKIQL 8 106 490.2855782082544 978.5566034833088 2 490.2867004275322 MULTI CID FTMS 0 0 0 6742 235747.1875 0.9486406919526104 3 -0.1081008911132812 1 Unmodified _SLMFKIQL_ ENSG00000137094|ENST00000682809|DNAJB5;ENST00000541010.5_1_9:34990621-34990810:+|nuORF;nc|ENSG00000137094|O75953-5|DNAJB5 13.50788311687929 0.7113601687236069 4 [{I|L}T]SVA 5 7 31.699 0.0 0.0 3.2394 0.0 0.0 0.0 504.2655557973709 504.2655557973709 1.5508648229288475 0.0 0.0 0.0 0 0.0 1.154901959985743 0.9436726795685344 0.0 [{I|L}T]SVA 3.2394 - 1537 1 2.202 66468.8 1.0 2414 4327 6742 HBL1_DMSO_200M_050219_2,6743 HBL1_DMSO_200M_050219_2,6743,SLMFKIQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6744 35.937 497.0 190400.0 25 0 7935.0 + -1 VPLHECPMQ 9 133 563.7545757771308 1125.4945986210614 2 563.7542602419853 MULTI CID FTMS 0 0 0 6742 119332.125 0.5133254469686785 -3 0.0772590637207031 2 Carbamidomethyl (C),Oxidation (M) _VPLHEC(Carbamidomethyl (C))PM(Oxidation (M))Q_ REV__ENST00000525527.5_1_11:111268336-111269853:-|nuORF 29.081581746732265 0.1611639662936252 4 VP{I|L}EHPN 7 -1 61.494 0.0 0.0 5.4637 0.0 0.0 0.0 336.06931482486567 336.06931482486567 29.431963025707454 0.0 0.0 0.0 0 1.055462187404089 1.154901959985743 0.0 0.6694451763165201 VP{I|L}EHPN 5.4637 - 806 + 1 2.202 80160.4 1.0 2415 4327 6742 HBL1_DMSO_200M_050219_2,6744 HBL1_DMSO_200M_050219_2,6744,VPLHECPMQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6745 35.941 197.0 397670.0 25 0 49380.0 + -1 SSSRCLAPT 9 101 489.7351595460708 977.4557661589416 2 489.7354614138603 MULTI CID FTMS 0 0 0 6742 251719.953125 0.1584288858515794 -6 0.1134033203125 3 Carbamidomethyl (C) _SSSRC(Carbamidomethyl (C))LAPT_ REV__nc|ENSG00000118004|Q9BWP8-9|COLEC11 21.53697664764585 0.2571576504437394 4 {[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q 8 -1 + 38.99 0.0 0.0 3.9889 3.9889 67.179 0.0 0.0 0.0 3.521825181113627 3.842823352908141 3.521825181113627 1.7609125905568137 0 0.8807196863200843 0.0 0.0 0.3807196863200844 {[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}D[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}SWRDQ;{[WT]|[RM]}SD[QT]{I|L}Q;[{I|L}T]SVC(Carbamidomethyl (C))RDQ;[VS]{I|L}TC(Carbamidomethyl (C))RDQ;{[CA]|SS}S{I|L}W[RD]Q;{[WT]|[RM]}DS[QT]{I|L}Q;[{M(Oxidation (M))|F}T]{[YC]|[HE]}G{M(Oxidation (M))|F}{I|L}Q;{[TV]|[{I|L}S]}VTC(Carbamidomethyl (C))RDQ 3.9889;3.8087;3.7317;3.6286;3.5957;3.4228;3.3553;3.3206;2.4195;2.2196 -;-;-;-;-;-;-;-;-;- 1505 + 1 2.202 65937.8 1.0 2416 4327 6742 HBL1_DMSO_200M_050219_2,6745 HBL1_DMSO_200M_050219_2,6745,SSSRCLAPT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6746 35.954 800.0 141220.0 25 0 10457.0 -1 0 105 647.3251777819678 646.3179013153677 1 647.3256103396416 MULTI CID FTMS 0 0 0 6742 237345.96875 0.514497621647744 8 -0.3633918762207031 4 4 {[DA]|[EG]}{I|L}ETV 6 -1 + 74.988 0.0 0.0 11.602 11.602 82.028 0.0 0.0 0.0 0.7973492024245843 14.827548579838693 0.7973492024245843 0.7973492024245843 0 1.4604093769761877 1.2218487496163564 0.9749073637206092 0.0 {[DA]|[EG]}{I|L}ETV;{[QN]|[E{I|L}]|[KN]}GETV;{[DA]|[EG]}{I|L}TEV;{[QN]|[E{I|L}]|[KN]}GTEV;{[DA]|[EG]}E{I|L}TV;{[QN]|[E{I|L}]|[KN]}SAEV;{NN|[MP]|[D{I|L}]|[EV]}AETV;{[QN]|[E{I|L}]|[KN]}TGEV;{NN|[MP]|[D{I|L}]|[EV]}ATEV;{[DA]|[EG]}T{I|L}EV 11.602;11.479;10.548;10.424;9.7937;9.6703;9.5083;8.8899;8.4535;8.3628 -;-;-;-;-;-;-;-;-;- 661 1 2.202 90221.4 0.8600000143051147 2417 4327 6742 HBL1_DMSO_200M_050219_2,6746 HBL1_DMSO_200M_050219_2,6746, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6748 35.965 452.0 177060.0 25 0 10010.0 10884 GAFYLLGTGSM 11 129 558.7721678036372 1115.5297826740743 2 558.7714721560478 MULTI CID FTMS 0 0 0 6747 86972.8515625 0.1968456703704159 9 -0.4014472961425781 1 Unmodified _GAFYLLGTGSM_ nc|ENSG00000211750|A0A075B6N3|TRBV24-1 29.081581746732265 0.4093582134107448 4 [YT]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}KTSM 9 6 + 59.387 0.0 0.0 5.3236 5.3236 76.714 0.0 0.0 0.0 4.091422346133193 4.091422346133193 4.091422346133193 4.091422346133193 0 1.6989700043360187 2.0 0.5283773187068795 0.0 [YT]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}KTSM;[YT]{[MG]|[TS]}[R{I|L}]GTSM;AAP[EP]KQGTSM;{[QV]|[N{I|L}]|[RA]|[KV]}[HT]KQGTSM;[YT]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[NG]Y{I|L};{[MG]|[TS]}[YT][R{I|L}]GTSM;[PG]A[C(Carbamidomethyl (C))H]KKTSM;{[VA]|[{I|L}G]}G[HT]KQGTSM;[QP][C(Carbamidomethyl (C))H]KKTSM;{[QV]|[N{I|L}]|[RA]|[KV]}[HT]KQGGMM 5.3236;4.9568;2.8105;2.7821;2.5319;2.3859;2.3384;2.2463;2.2056;1.7034 -;-;-;-;-;-;-;-;-;- 428 + 1 2.202 65683.9 1.0 2418 4328 6747 HBL1_DMSO_200M_050219_2,6748 HBL1_DMSO_200M_050219_2,6748,GAFYLLGTGSM False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 6749 35.966 50.0 991150.0 25 0 99828.0 + 39917 VFQKPSGVSA 10 74 510.280001919738 1018.545450906276 2 510.2801391482353 MULTI CID FTMS 0 0 0 6747 1232091.375 0.7446665401472118 -3 0.0604515075683593 2 Unmodified _VFQKPSGVSA_ ENSG00000189306|ENST00000323013|RRP7A;ENST00000357802.6_1_22:42970741-42976277:-|nuORF 45.69961567697781 0.105390671673896 4 RR{[CT]|[{M(Oxidation (M))|F}G]}KQ{NN|[MP]|[D{I|L}]|[EV]} 8 8 + 25.111 0.0 0.0 2.4654 2.4654 63.999 0.0 0.0 0.0 0.9421249706470292 -2.218487496163561 -2.218487496163561 1.9188552623891293 0 0.8494850021680094 0.0 0.3494850021680094 0.4247425010840047 RR{[CT]|[{M(Oxidation (M))|F}G]}KQ{NN|[MP]|[D{I|L}]|[EV]};{[QD]|[EN]|[WG]|[KD]|[RS]}PKQ{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};RR{[CT]|[{M(Oxidation (M))|F}G]}K[AG]{NN|[MP]|[D{I|L}]|[EV]};{[QD]|[EN]|[WG]|[KD]|[RS]}PK[AG]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QD]|[EN]|[WG]|[KD]|[RS]}PKQ{[SA]|[TG]}[{M(Oxidation (M))|F}V];RR{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QD]|[EN]|[WG]|[KD]|[RS]}PKS[QA][{M(Oxidation (M))|F}V] 2.4654;2.277;1.556;1.3676;0.77655;0.37155;0.012109 -;-;-;-;-;-;- 240 1 2.202 45814.4 1.0 2419 4328 6747 HBL1_DMSO_200M_050219_2,6749 HBL1_DMSO_200M_050219_2,6749,VFQKPSGVSA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6750 35.974 432.0 194070.0 25 0 17503.0 + 25442 NEGRSSVACIQ 11 109 582.2757565865962 1162.5369602399924 2 582.2759277224541 MULTI CID FTMS 0 0 0 6747 121722.203125 0.4276826221614126 -3 0.0604515075683593 3 Unmodified _NEGRSSVACIQ_ REV__ENST00000547005.5_1_12:108959188-108962689:+|nuORF 27.22323531849824 0.4529927607131788 4 {[QG]|[NA]}DV{[WN]|[YH]}G{M(Oxidation (M))|F}{I|L}Q 10 -1 + 60.244 0.0 0.0 5.1821 5.1821 86.962 0.0 0.0 0.0 18.010299956639813 37.05645316481359 18.010299956639813 34.407365922476814 0 1.7302046884880935 1.2218487496163564 0.0 0.9119543704721594 {[QG]|[NA]}DV{[WN]|[YH]}G{M(Oxidation (M))|F}{I|L}Q;[QP]T[YN]{[WN]|[YH]}{I|L}Q;{[VA]|[{I|L}G]}[DN]{[WN]|[YH]}G{M(Oxidation (M))|F}{I|L}Q;[QP]T[YN]{I|L}WNQ;[QP]T[YN]{I|L}WGGQ;[TA][PG][YN]{I|L}WNQ 5.1821;2.2224;1.7525;1.7292;0.93709;0.57656 -;-;-;-;-;- 244 1 2.202 67287.3 1.0 2420 4328 6747 HBL1_DMSO_200M_050219_2,6750 HBL1_DMSO_200M_050219_2,6750,NEGRSSVACIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6752 35.99 800.0 135220.0 25 0 6798.9 -1 0 118 620.3133180947808 619.3060416281808 1 620.3141357302666 MULTI CID FTMS 0 0 0 6751 86133.8125 0.183288121125891 54 -2.781818389892578 1 4 PP[QP]N 5 -1 28.57 0.0 0.0 4.6132 0.0 0.0 68.03425341680072 0.0 68.03425341680072 0.0 9.853998963943551 0.0 0.0 0 0.0 0.0 0.0 1.086696871556164 PP[QP]N 4.6132 - 316 + 1 2.202 83547.0 0.6000000238418579 2421 4329 6751 HBL1_DMSO_200M_050219_2,6752 HBL1_DMSO_200M_050219_2,6752, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6753 36.002 686.0 288190.0 25 0 32405.0 + 6496 EAIQRTPKI 9 207 352.5453801790373 1054.614311137312 3 352.5449401736259 MULTI CID FTMS 0 0 0 6751 200888.0625 0.512923998510798 -15 0.3663558959960937 2 Unmodified _EAIQRTPKI_ B2M|p.Y46Cfs*10|1|0.63|ENSG00000166710|chr15:44715491-44715492|TA/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF 29.081581746732265 0.1611639662936252 4 {I|L}{I|L}Q[SG]PK{I|L} 8 4 23.026 0.0 0.0 2.1834 0.0 0.0 200.0794229921333 0.0 200.0794229921333 0.0 0.0534980230035095 0.0 0.0 0 0.0 0.0 1.5114393726401687 0.4247425010840047 {I|L}{I|L}Q[SG]PK{I|L} 2.1834 - 660 + 1 2.202 161151.6 1.0 2422 4329 6751 HBL1_DMSO_200M_050219_2,6753 HBL1_DMSO_200M_050219_2,6753,EAIQRTPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6754 36.016 800.0 194400.0 25 0 13166.0 + 21560 LPKEDPTAV 9 159 485.26616294007226 968.5177729469444 2 485.2651855349541 MULTI CID FTMS 0 0 0 6751 128488.4375 0.5608558459171797 -3 0.0756568908691406 3 Unmodified _LPKEDPTAV_ ENSG00000181789|ENST00000314797|COPG1 49.55428908609986 0.0413471690215031 4 {[TV]|[{I|L}S]}[DG]{I|L}PTPAV 10 5 + 62.325 0.0 0.0 6.4351 6.4351 75.251 0.0 0.0 0.0 0.8565782558790502 0.8565782558790502 0.8565782558790502 0.8565782558790502 0 1.305462187404089 1.6989700043360187 1.2059771852360797 0.0 {[TV]|[{I|L}S]}[DG]{I|L}PTPAV;{I|L}PWWTPAV;[{I|L}P]WWTPAV;[TP]{[WT]|[RM]}PTPAV;{NN|[MP]|[D{I|L}]|[EV]}[SG]{I|L}PTPAV;[TP]{[CA]|SS}{I|L}PTPAV;WW{I|L}PTPAV;{[TV]|[{I|L}S]}[DG]P{I|L}TPAV;[{I|L}P][SG]D{I|L}TPAV;{[TV]|[{I|L}S]}[PG]D{I|L}TPAV 6.4351;6.3467;5.8657;5.8453;5.4498;5.4445;5.3486;5.2267;5.2222;5.1877 -;-;-;-;-;-;-;-;-;- 3052 1 2.202 118569.2 0.550000011920929 2423 4329 6751 HBL1_DMSO_200M_050219_2,6754 HBL1_DMSO_200M_050219_2,6754,LPKEDPTAV True True LPKEDPTAV 36.015586 485.265185534954 1997569.875 6751.0 ENSG00000181789|ENST00000314797|COPG1 4.794464826583862 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6755 36.029 800.0 156700.0 25 0 14835.0 + 24092 LYHSSQNEL 9 156 545.7625191007378 1089.5104852682755 2 545.7628661990166 MULTI CID FTMS 0 0 0 6751 108805.671875 1.0 0 0.0 4 Unmodified _LYHSSQNEL_ ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1 43.85829265575387 0.0542763391141878 4 {[WN]|[YH]}{I|L}SSQNE{I|L} 9 2 + 46.71 0.0 0.0 4.2872 4.2872 67.498 0.0 0.0 0.0 1.3033376849500584 13.213337517843648 1.3033376849500584 1.3033376849500584 0 0.3807196863200844 0.0 0.7302046884880937 0.6549471895720984 {[WN]|[YH]}{I|L}SSQNE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[TP]QNE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}R{[{M(Oxidation (M))|F}H]|[RQ]}E{I|L};{[WN]|[YH]}{I|L}SS[AG]NE{I|L};{[WN]|[YH]}{I|L}SSQGGE{I|L};{[WN]|[YH]}S{I|L}SQNE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[TP]QGGE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[TP][AG]NE{I|L};{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]}SSQNE{I|L};[HS]Y{I|L}SQNE{I|L} 4.2872;4.1676;3.4554;3.4421;3.4421;3.3314;3.3224;3.3224;3.2179;2.7319 -;-;-;-;-;-;-;-;-;- 1367 1 2.202 98210.6 0.5799999833106995 2424 4329 6751 HBL1_DMSO_200M_050219_2,6755 HBL1_DMSO_200M_050219_2,6755,LYHSSQNEL True True LYHSSQNEL 36.029419 545.762866199017 891304.0625 6751.0 ENSG00000173230|ENST00000614479|GOLGB1;;nc|ENSG00000173230|Q14789-4|GOLGB1;;nc|ENSG00000173230|Q14789-2|GOLGB1;;nc|ENSG00000173230|Q14789|GOLGB1;;nc|ENSG00000173230|Q14789-3|GOLGB1 4.434180657068889 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6757 36.034 15.0 3287500.0 25 0 483040.0 + 5789 DPPPGSHVI 9 58 459.7377035282235 917.460854123247 2 459.7377502322197 MULTI CID FTMS 0 0 0 6756 3561548.25 0.3627144431616905 22 -1.163837432861328 1 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 42.09456458481378 0.0639583784996157 4 [DP]PP 4 5 41.95 0.0 0.0 4.5725 0.0 0.0 0.0 508.2569674127563 508.2569674127563 30.14590192746258 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + [DP]PP 4.5725 + + 92 + 1 2.197 45466.6 1.0 2425 4330 6756 HBL1_DMSO_200M_050219_2,6757 HBL1_DMSO_200M_050219_2,6757,DPPPGSHVI True True DPPPGSHVI 36.033965 459.73775023222 1821828528.0 6756.0 nc|ENSG00000130305|Q96P11-5|NSUN5;;nc|ENSG00000130305|Q96P11-3|NSUN5;;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;;ENSG00000130305|ENST00000438747|NSUN5;;nc|ENSG00000130305|Q96P11|NSUN5;;nc|ENSG00000130305|Q96P11-4|NSUN5 6.664512952168782 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6758 36.048 800.0 128960.0 25 0 12803.0 -1 ECKECRKCFYQ 11 102 775.8292829351711 1549.6440129371422 2 775.8288452029228 MULTI CID FTMS 0 0 0 6756 171459.1875 0.5861044165810037 6 -0.3081703186035156 2 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 34.93206674587334 0.2904649469012649 4 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}YQ 14 -1 + 124.89 0.0 0.0 8.059 8.059 82.242 0.0 0.0 0.0 2.060544824331245 0.0 0.0 2.060544824331245 0 1.75 1.0969100130080565 1.3996498648046138 1.6237125054200234 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}YQ;[QA]HDEAGAQDA{M(Oxidation (M))|F}YK;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}YQ;[QA]HDEAQQDA{M(Oxidation (M))|F}YQ;[QA]DHEAGAQDA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}QHEAGA[AG]DA{M(Oxidation (M))|F}YK;{[DA]|[EG]}QHEAGADAGA{M(Oxidation (M))|F}YK;{[DA]|[EG]}QHEQAQDA{M(Oxidation (M))|F}YQ;[QA]DHEAQQDA{M(Oxidation (M))|F}YK;[QA]HDEAGA[AG]DA{M(Oxidation (M))|F}YQ 8.059;7.926;7.8229;7.69;7.5886;7.4749;7.3909;7.383;7.3526;7.342 -;-;-;-;-;-;-;-;-;- 15217 1 2.197 78295.0 0.8199999928474426 2426 4330 6756 HBL1_DMSO_200M_050219_2,6758 HBL1_DMSO_200M_050219_2,6758,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6760 36.064 800.0 165610.0 25 0 23531.0 + -1 FSNGCETCY 9 154 569.2019300456684 1136.3893071581367 2 569.2013427615166 MULTI CID FTMS 0 0 0 6759 154281.328125 0.7315005428836605 -1 0.0183296203613281 1 2 Carbamidomethyl (C) _FSNGC(Carbamidomethyl (C))ETC(Carbamidomethyl (C))Y_ REV__ENSG00000157429|ENST00000288177|ZNF19;REV__nc|ENSG00000157429|P17023-2|ZNF19 13.042465956692816 0.4836390050082244 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N 3 -1 27.179 0.0 0.0 2.3917 0.0 0.0 0.0 785.2222899064367 785.2222899064367 6.971128017558641 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N 2.3917 + + 840 1 2.197 100314.5 0.6399999856948853 2427 4331 6759 HBL1_DMSO_200M_050219_2,6760 HBL1_DMSO_200M_050219_2,6760,FSNGCETCY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6761 36.067 134.0 385150.0 25 0 38136.0 + 6680 EAYTHAQI 8 91 466.727488986143 931.440425039086 2 466.7278015017509 MULTI CID FTMS 0 0 0 6759 309896.375 1.0 0 0.0 2 Unmodified _EAYTHAQI_ ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR 19.438996006549623 0.6237395211498085 4 [HT]AQYA{[QN]|[E{I|L}]|[KN]} 8 6 + 20.767 0.0 0.0 2.2296 2.2296 64.378 0.0 0.0 0.0 0.5997167634124168 4.569488448666803 0.5997167634124168 2.284700126913385 0 0.0 0.0 0.0 0.7614393726401688 [HT]AQYA{[QN]|[E{I|L}]|[KN]};[TA]HQYA{[QN]|[E{I|L}]|[KN]};[HA]TQYA{[QN]|[E{I|L}]|[KN]};[HA]QTYA{[QN]|[E{I|L}]|[KN]};[PG][WP]YA{[QN]|[E{I|L}]|[KN]};[HT]A[AG]YA{[QN]|[E{I|L}]|[KN]};[TA]H[AG]YA{[QN]|[E{I|L}]|[KN]} 2.2296;1.9843;1.7174;1.3942;1.2231;0.41772;0.17244 -;-;-;-;-;-;- 177 1 2.197 44778.1 1.0 2428 4331 6759 HBL1_DMSO_200M_050219_2,6761 HBL1_DMSO_200M_050219_2,6761,EAYTHAQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6762 36.071 239.0 356270.0 25 0 39453.0 + 38494 TSGTTIIGTIK 11 124 364.5488934864384 1090.624851059515 3 364.5488464236259 MULTI CID FTMS 0 0 0 6759 145211.09375 0.6947560570462624 -1 0.0183296203613281 3 Unmodified _TSGTTIIGTIK_ REV__ENSG00000057019|ENST00000326840|DCBLD2;REV__nc|ENSG00000057019|Q96PD2-2|DCBLD2 21.53697664764585 0.586507868110548 4 [{I|L}T][KA]RPS[YR] 9 -1 + 27.526 0.0 0.0 2.5239 2.5239 78.441 0.0 0.0 0.0 6.81270466781767 12.051368718728812 6.81270466781767 27.526042185661325 0 0.0 2.0 0.1382104921644452 0.0 [{I|L}T][KA]RPS[YR] 2.5239 - 290 1 2.197 74301.3 1.0 2429 4331 6759 HBL1_DMSO_200M_050219_2,6762 HBL1_DMSO_200M_050219_2,6762,TSGTTIIGTIK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6763 36.085 800.0 185300.0 25 0 25621.0 3546 CYCRFFNAF 9 132 585.7445422871036 1169.4745316410072 2 585.7447997927666 MULTI CID FTMS 0 0 0 6759 135128.21875 0.683339554461845 -2 0.0740280151367187 4 Unmodified _CYCRFFNAF_ ENSG00000159723|ENST00000290953|AGRP 23.1484247019978 0.2366544122328345 4 DEAQQNA{M(Oxidation (M))|F} 8 6 77.798 0.0 0.0 6.6524 0.0 0.0 248.0914478986344 0.0 248.0914478986344 0.0 53.0401779476049 0.0 0.0 0 0.8807196863200843 0.0 0.7059771852360797 0.805462187404089 DEAQQNA{M(Oxidation (M))|F} 6.6524 - 1404 1 2.197 114355.3 0.6299999952316284 2430 4331 6759 HBL1_DMSO_200M_050219_2,6763 HBL1_DMSO_200M_050219_2,6763,CYCRFFNAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6764 36.096 607.0 185030.0 25 0 12618.0 + 24826 MPKKYEHVI 9 136 382.2109693014357 1143.611078504507 3 382.2105590701103 MULTI CID FTMS 0 0 0 6759 122153.53125 0.9290891229978324 -1 0.0183296203613281 5 Unmodified _MPKKYEHVI_ ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-2|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP 15.738622578938676 0.4106572216562794 4 MPKK[YE]HV{I|L} 9 0 + 29.848 0.0 0.0 2.61 2.61 64.245 0.0 0.0 0.0 -0.2629404780348849 6.940834170577908 -0.2629404780348849 1.9382002601611283 0 0.3807196863200844 0.0 0.0 0.0 + + MPKK[YE]HV{I|L};[YV]PKV[CS]HV{I|L};[YV]VPK[CS]HV{I|L};M{I|L}[{I|L}T]K[CS]HV{I|L};[YV]PVK[CS]HV{I|L};[KP]N[WM]KEV{I|L};[YV]PKK{M(Oxidation (M))|F}[Y{I|L}]S;[KP]AA[CS]KPMV{I|L};[H{I|L}][HQ]{I|L}GPMV{I|L};[YV]PKV{[HG]|PP}[{M(Oxidation (M))|F}T]P 2.61;2.4405;2.4405;2.2665;2.0233;1.2754;1.1671;0.94978;0.69823;0.4942 +;-;-;-;-;-;-;-;-;- + 330 + 1 2.197 93357.4 1.0 2431 4331 6759 HBL1_DMSO_200M_050219_2,6764 HBL1_DMSO_200M_050219_2,6764,MPKKYEHVI False True MPKKYEHVI 36.095512 382.21055907011 1081109.5 6759.0 nc|ENSG00000080603|Q6ZRS2-3|SRCAP;;ENSG00000080603|ENST00000262518|SRCAP;;nc|ENSG00000080603|Q6ZRS2-2|SRCAP 5.026560624440511 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6765 36.109 800.0 168800.0 25 0 17811.0 + 16117 ITSSAVTTALK 11 155 546.3195512379983 1090.6245495427966 2 546.3190795779228 MULTI CID FTMS 0 0 0 6759 121622.8984375 1.0 0 0.0 6 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 61.08992128646608 0.0647217981198246 4 [{I|L}T]QK[{I|L}T]SST{I|L} 10 8 + 64.708 0.0 0.0 5.9331 5.9331 71.794 0.0 0.0 0.0 4.1906366823344285 29.30600747992833 4.1906366823344285 0.0793970026509498 0 0.6989700043360187 2.0 2.5356668758921828 0.0 [{I|L}T]QK[{I|L}T]SST{I|L};[{I|L}T][KA]TVASST{I|L};{I|L}TSSAV[RK]{[ET]|[MV]};[{I|L}T][AG]K[{I|L}T]SST{I|L};[{I|L}T][KA]G[{I|L}T]SST{I|L};{I|L}TS[YR]G[PG]K{I|L};{I|L}TS[YR]K[NP]{I|L};[{I|L}T]QK[HS]KH{I|L};{I|L}TS[YR]KQVP;{I|L}TS[YR]G[PG]{I|L}K 5.9331;5.9258;5.2387;5.0928;5.0887;4.7054;4.6585;4.6069;4.5954;4.2179 -;-;-;-;-;-;-;-;-;- 3306 1 2.197 102628.8 0.6000000238418579 2432 4331 6759 HBL1_DMSO_200M_050219_2,6765 HBL1_DMSO_200M_050219_2,6765,ITSSAVTTALK True True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 6766 36.123 800.0 149540.0 25 0 12018.0 + 41891 VQDDIKESV 9 176 516.7634865772512 0 516.7408325076103 PEAK CID FTMS 0 0 0 6759 27671.59375 0.3497524108919655 -3 0.093353271484375 7 Unmodified _VQDDIKESV_ ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS 23.78978130925829 0.1667157386347964 4 D 1 8 8.9794 0.0 0.0 0.87051 0.0 0.0 689.3583197347774 224.1042879693969 913.4626077041744 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + D 0.87051 + + 271 + 1 2.197 93722.4 0.5699999928474426 2433 4331 6759 HBL1_DMSO_200M_050219_2,6766 HBL1_DMSO_200M_050219_2,6766,VQDDIKESV False True VQDDIKESV 36.123181 516.74083250761 829870.1875 6759.0 ENSG00000136813|ENST00000684092|ECPAS;;nc|ENSG00000136813|Q5VYK3|ECPAS 5.159799734751384 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6767 36.132 403.0 233710.0 25 0 50536.0 + 35624 SVAGSVERV 9 94 452.2480087683029 902.4814646034058 2 452.2486450076103 MULTI CID FTMS 0 0 0 6759 114921.640625 0.2008484697745784 -4 0.1264305114746093 8 Unmodified _SVAGSVERV_ ENSG00000130713|ENST00000372358|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;ENST00000463488.1_1_9:133569202-133574940:+|nuORF;ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2 28.49450938151212 0.1686335738423394 4 [VS]AGSVERV 9 0 + 67.629 0.0 0.0 7.4937 7.4937 92.5 0.0 0.0 0.0 57.62919476879247 12.252684618815088 12.252684618815088 11.478174818886371 0 0.9247425010840048 2.0 0.0 0.0 + + [VS]AGSVERV;[VS]QSVERV;[VS]AGSV[RD]{I|L};[VS]AWWRV;[VS]V{[QS]|[NT]}ERV;[VS]QSV[RD]{I|L};[{I|L}P][YK]SGA[PA];[VS]V{[QS]|[NT]}[RD]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GH[HK][PA];[{I|L}P][YK]SQ[PA] 7.4937;6.2218;5.4517;5.1838;4.4777;4.1798;2.5306;2.4357;1.8391;1.2588 +;-;-;-;-;-;-;-;-;- + 166 + 1 2.197 78166.0 1.0 2434 4331 6759 HBL1_DMSO_200M_050219_2,6767 HBL1_DMSO_200M_050219_2,6767,SVAGSVERV False True SVAGSVERV 36.131856 452.24864500761 8387093.0 6759.0 ENST00000491115.6_1_9:133569178-133574746:+|nuORF;;nc|ENSG00000130713|Q13868-3|EXOSC2;;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;;nc|ENSG00000130713|Q13868-2|EXOSC2;;ENSG00000130713|ENST00000372358|EXOSC2;;ENST00000463488.1_1_9:133569202-133574940:+|nuORF 5.673647403717041 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6768 36.138 337.0 323950.0 25 0 33641.0 + 37724 TLQIEKTLQ 9 126 358.5452952592271 1072.6140563778813 3 358.5450012087822 MULTI CID FTMS 0 0 0 6759 116393.53125 0.6961104665804766 -1 0.0183296203613281 9 Unmodified _TLQIEKTLQ_ REV__ENSG00000165097|ENST00000650836|KDM1B;REV__nc|ENSG00000165097|Q8NB78-2|KDM1B 16.942295170755138 0.3780752226737986 4 {[QV]|[N{I|L}]|[RA]|[KV]}[R{I|L}]VASS 8 -1 37.273 0.0 0.0 3.475 0.0 0.0 0.0 229.1213555324313 229.1213555324313 14.952727916589552 0.0 0.0 0.0 0 0.0 0.638272163982407 0.0 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}[R{I|L}]VASS 3.475 - 368 1 2.197 95271.8 1.0 2435 4331 6759 HBL1_DMSO_200M_050219_2,6768 HBL1_DMSO_200M_050219_2,6768,TLQIEKTLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6770 36.142 50.0 1238900.0 25 0 88666.0 + 38660 TTISKVSQV 9 99 481.7793755171475 961.544198101095 2 481.7795593142509 MULTI CID FTMS 0 0 0 6769 1196841.25 0.6160913176676358 2 -0.1069221496582031 1 Unmodified _TTISKVSQV_ ENSG00000065183|ENST00000349139|WDR3 43.77239144664712 0.0547478964384323 4 {[DS]|[MA]|[CV]|TT}{I|L}SKVSAGV 10 2 + 32.177 0.0 0.0 3.3464 3.3464 65.024 0.0 0.0 0.0 -4.09256854528806 3.2319095436452088 -4.09256854528806 1.6551701944288872 0 0.4247425010840047 0.0 0.0 0.3807196863200844 {[DS]|[MA]|[CV]|TT}{I|L}SKVSAGV;{[DS]|[MA]|[CV]|TT}{I|L}SKVSQV;{[DS]|[MA]|[CV]|TT}[KT]KS{I|L}[PS];[YR]Q[R{I|L}]AGV 3.3464;3.1742;1.6603;0.39753 -;+;-;- + 428 + 1 2.197 55320.0 1.0 2436 4332 6769 HBL1_DMSO_200M_050219_2,6770 HBL1_DMSO_200M_050219_2,6770,TTISKVSQV True True TTISKVSQV 36.142479 481.779559314251 13636865.0 6769.0 ENSG00000065183|ENST00000349139|WDR3 6.684237162272136 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6771 36.144 86.0 572490.0 25 0 77507.0 + 43791 YENEVALRQ 9 61 561.2831797001986 1120.5518064671971 2 561.2831909060478 MULTI CID FTMS 0 0 0 6769 659224.5625 0.5768709678866052 3 -0.1467781066894531 2 Unmodified _YENEVALRQ_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 59.36838082759317 0.0264317782606298 4 YENEVA{I|L}RQ 9 0 + 104.19 0.0 0.0 9.2983 9.2983 93.56 0.0 0.0 0.0 36.47817481888637 9.208187539523747 9.208187539523747 9.208187539523747 0 1.274227503252014 2.0 0.0 1.1307196863200843 + + YENEVA{I|L}RQ;YEGGEVA{I|L}RQ 9.2983;8.4765 +;- + 140 + 1 2.197 43213.1 1.0 2437 4332 6769 HBL1_DMSO_200M_050219_2,6771 HBL1_DMSO_200M_050219_2,6771,YENEVALRQ True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 6772 36.147 127.0 612900.0 25 0 77534.0 28398 PSPHGLAG 8 103 368.19345383228887 734.3723547313778 2 368.1930114626884 MULTI CID FTMS 0 0 0 6769 489906.34375 0.8998466868635151 -3 0.1642112731933593 3 Unmodified _PSPHGLAG_ ENST00000300976.8_1_19:18780088-18780439:+|nuORF 9.347437153973935 0.7675937258251505 4 [RD]G{M(Oxidation (M))|F}{I|L}Q 6 7 + 36.872 0.0 0.0 5.0209 5.0209 78.915 0.0 0.0 0.0 4.353415603609747 20.701075205960887 4.353415603609747 7.161903266879719 0 0.9247425010840048 0.0 0.0 0.0 [RD]G{M(Oxidation (M))|F}{I|L}Q;{[WT]|[RM]}{[MG]|[TS]}{I|L}Q;{[CA]|SS}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}R 5.0209;4.0456;2.0612 -;-;- 71 1 2.197 67961.6 1.0 2438 4332 6769 HBL1_DMSO_200M_050219_2,6772 HBL1_DMSO_200M_050219_2,6772,PSPHGLAG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6773 36.151 184.0 457080.0 25 0 49119.0 -1 0 110 472.2753912780334 471.2681148114334 1 472.2750427126884 MULTI CID FTMS 0 0 0 6769 387262.75 0.2046482962665466 -14 0.4250640869140625 4 4 Y 1 -1 15.485 0.0 0.0 3.2857 0.0 0.0 290.1937262389709 0.0 290.1937262389709 0.0 5.105946495349691 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.2857 - 17 + 1 2.197 70799.8 1.0 2439 4332 6769 HBL1_DMSO_200M_050219_2,6773 HBL1_DMSO_200M_050219_2,6773, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6774 36.153 130.0 369270.0 25 0 34894.0 + 8849 EYVSSQLGRP 10 75 568.2923023208621 1134.570051708524 2 568.2928344607353 MULTI CID FTMS 0 0 0 6769 351214.0625 0.3882715215983278 -11 0.33001708984375 5 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 17.11289562659939 0.5604042439455784 4 {M(Oxidation (M))|F}STNG{I|L}RP 8 -1 55.482 0.0 0.0 4.8902 0.0 0.0 244.14173166536187 0.0 244.14173166536187 0.0 41.60342221458804 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.2742275032520141 {M(Oxidation (M))|F}STNG{I|L}RP 4.8902 - 232 + 1 2.197 44659.1 1.0 2440 4332 6769 HBL1_DMSO_200M_050219_2,6774 HBL1_DMSO_200M_050219_2,6774,EYVSSQLGRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6775 36.159 313.0 372030.0 25 0 86576.0 + 45810 YYNGKIHAY 9 123 376.8541338163574 1127.5405720492722 3 376.8537780642509 MULTI CID FTMS 0 0 0 6769 227788.640625 1.0 0 0.0 6 Unmodified _YYNGKIHAY_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000493271.1_1_2:96945134-96947649:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 44.40701690623563 0.0526327925666318 4 YYNGK{I|L}HAY 9 0 + 75.571 0.0 0.0 6.7023 6.7023 88.32 0.0 0.0 0.0 36.47817481888637 9.719712763997563 9.719712763997563 9.208187539523747 0 0.0 2.0 0.0 0.4247425010840047 + + YYNGK{I|L}HAY;YYGGGK{I|L}HAY;YYNGK{I|L}{[QG]|[NA]}W;YYNGK{I|L}HS{M(Oxidation (M))|F};YYNGK[KP]C(Carbamidomethyl (C))V;YYGGGK{I|L}{[QG]|[NA]}W;YY[W{I|L}]{I|L}HAY;YYGGGK{I|L}HS{M(Oxidation (M))|F};YY[W{I|L}]{I|L}{[QG]|[NA]}W;YYGGGK[KP]C(Carbamidomethyl (C))V 6.7023;5.8856;5.8403;5.5999;5.0491;5.0236;4.889;4.7832;4.4037;4.2324 +;-;-;-;-;-;-;-;-;- + 578 + 1 2.197 99208.9 1.0 2441 4332 6769 HBL1_DMSO_200M_050219_2,6775 HBL1_DMSO_200M_050219_2,6775,YYNGKIHAY True True YYNGKIHAY 36.158914 376.853778064251 1519271.5 6769.0 ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENST00000493271.1_1_2:96945134-96947649:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 7.764779249827067 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6776 36.164 258.0 292030.0 25 0 51622.0 + 5068 DGYEQAARV 9 107 504.7409398526873 1007.4673267721746 2 504.7408935427666 MULTI CID FTMS 0 0 0 6769 202992.234375 0.0006960080688147 95 -4.613304138183594 7 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 53.832793166522166 0.0319663582346103 4 [DG]YEQAARV 9 0 + 69.053 0.0 0.0 6.8541 6.8541 88.348 0.0 0.0 0.0 58.08387609333212 7.351905544230341 7.351905544230341 9.208187539523742 0 0.9204841662593096 1.0457574905606752 0.4247425010840047 0.6549471895720984 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YQEAARV;[DG]YEQA{[NV]|[RG]}{I|L};[DG]Y[AG]EAARV;[DG]YE[AG]A{[NV]|[RG]}{I|L};[DG]YQEA{[NV]|[RG]}{I|L};[DG]YEV[NG]RV;[DG]YV[DN]ARV;[DG]YVE[NG]RV 6.8541;5.9401;5.8881;5.6606;4.9741;4.7466;4.6946;4.6942;4.422;3.8244 +;-;-;-;-;-;-;-;-;- + 208 + 1 2.197 61530.8 1.0 2442 4332 6769 HBL1_DMSO_200M_050219_2,6776 HBL1_DMSO_200M_050219_2,6776,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6777 36.167 168.0 262150.0 25 0 42571.0 33147 SEVLAQPQGA 10 82 500.2603196605994 998.5060863879988 2 500.2595397830009 MULTI CID FTMS 0 0 0 6769 207232.46875 0.7913610479117644 1 -0.0886688232421875 8 Unmodified _SEVLAQPQGA_ ENSG00000167646|ENST00000524407|DNAAF3;ENST00000587789.2_1_19:55670432-55671308:-|nuORF;nc|ENSG00000167646|Q8N9W5-3|DNAAF3;nc|ENSG00000167646|Q8N9W5-6|DNAAF3;nc|ENSG00000167646|Q8N9W5-7|DNAAF3 9.38312468134398 0.6832340498775793 4 {NN|[MP]|[D{I|L}]|[EV]}[KQ][HM]EV 8 7 {NN|[MP]|[D{I|L}]|[EV]}[KQ][HM]E + + 14.604 -8.2053 -0.93091 1.4626 1.4626 44.315 0.0 0.0 0.0 0.0 -0.3444064470390628 -0.3444064470390628 0.0 0 0.0 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KQ][HM]EV 1.4626 - 92 + 1 2.197 38912.2 1.0 2443 4332 6769 HBL1_DMSO_200M_050219_2,6777 HBL1_DMSO_200M_050219_2,6777,SEVLAQPQGA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6778 36.176 525.0 188920.0 25 0 14634.0 + 21652 LPLHSQQQV 9 121 525.2905972783684 1048.5666416235367 2 525.2906371951103 MULTI CID FTMS 0 0 0 6769 179292.828125 0.8120722591482624 -3 0.1642112731933593 9 Unmodified _LPLHSQQQV_ ENSG00000010818|ENST00000367603|HIVEP2 69.10491478415734 0.0214449631113747 4 [{I|L}P]HSQQ{I|L}QV 9 2 + 61.525 0.0 0.0 5.8675 5.8675 73.916 0.0 0.0 0.0 15.642492736872596 25.411646332235986 15.642492736872596 1.2763625255165325 0 0.9163865622122672 1.3010299956639813 0.25 0.75 [{I|L}P]HSQQ{I|L}QV;[{I|L}P]HSQ{I|L}QQV;[{I|L}P]HSQQQ{I|L}V;[{I|L}P]H{I|L}SQQQV;[{I|L}P]HS{I|L}QQQV;[{I|L}P]HS[AG]Q{I|L}QV;[{I|L}P]HSQQ{I|L}[AG]V;[{I|L}P]HSQ[AG]{I|L}QV;[{I|L}P]HSQ{I|L}[AG]QV;[{I|L}P]HS[AG]{I|L}QQV 5.8675;5.7458;5.2921;5.0884;5.0884;4.9894;4.9894;4.9894;4.8676;4.8676 -;-;-;-;-;-;-;-;-;- 1473 1 2.197 81988.2 1.0 2444 4332 6769 HBL1_DMSO_200M_050219_2,6778 HBL1_DMSO_200M_050219_2,6778,LPLHSQQQV True True LPLHSQQQV 36.176232 525.29063719511 1837846.75 6769.0 ENSG00000010818|ENST00000367603|HIVEP2 5.86508305867513 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6779 36.182 295.0 294970.0 25 0 23306.0 + 3263 AYGPPTRAV 9 114 466.2535885521363 930.4926241710726 2 466.2536193728447 MULTI CID FTMS 0 0 0 6769 139786.328125 0.0268381290621719 18 -0.9688644409179688 10 Unmodified _AYGPPTRAV_ ENSG00000084463|ENST00000261167|WBP11 17.11289562659939 0.3734572693229295 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 5 4 44.521 0.0 0.0 4.7846 0.0 0.0 0.0 442.2411593072876 442.2411593072876 25.99099084342931 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPP 4.7846 + + 167 + 1 2.197 72744.7 1.0 2445 4332 6769 HBL1_DMSO_200M_050219_2,6779 HBL1_DMSO_200M_050219_2,6779,AYGPPTRAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6780 36.191 514.0 123430.0 25 0 7525.8 + 32668 SDAYQTREI 9 85 541.7595519768906 1081.5045510205812 2 541.7598754763603 MULTI CID FTMS 0 0 0 6769 139580.828125 0.0463351230215446 13 -0.5662422180175781 11 Unmodified _SDAYQTREI_ ENSG00000127914|ENST00000356239|AKAP9;nc|ENSG00000127914|Q99996-3|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9 36.506200033944 0.094635877243972 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 8 8 47.228 0.0 0.0 4.3669 0.0 0.0 0.0 199.03679582146188 199.03679582146188 38.07951266944436 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.3807196863200844 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{I|L}QYA 4.3669 - 245 1 2.197 54138.3 1.0 2446 4332 6769 HBL1_DMSO_200M_050219_2,6780 HBL1_DMSO_200M_050219_2,6780,SDAYQTREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6781 36.205 800.0 123100.0 25 0 10609.0 + 33917 SLGFDSIKAY 10 152 550.7850050079923 1099.5554570827844 2 550.7850829958916 MULTI CID FTMS 0 0 0 6769 131182.640625 1.0 0 0.0 12 Unmodified _SLGFDSIKAY_ REV__chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;REV__ENSG00000115085|ENST00000264972|ZAP70;REV__ENSG00000165025|ENST00000375754|SYK;REV__ENST00000487283.5_1_2:98351482-98355958:+|nuORF;REV__ENST00000495754.1_1_2:98351695-98354405:+|nuORF;REV__nc|ENSG00000115085|P43403-2|ZAP70;REV__nc|ENSG00000115085|P43403-3|ZAP70;REV__nc|ENSG00000165025|P43405-2|SYK 24.020572477871973 0.4289996903560794 4 {[VA]|[{I|L}G]}GEYTVKAY 10 -1 + 25.964 0.0 0.0 2.3613 2.3613 69.169 0.0 0.0 0.0 6.499701431211591 -1.989700043360188 -1.989700043360188 5.173101226032614 0 0.7742275032520141 1.5228787452803376 0.5 0.0 {[VA]|[{I|L}G]}GEYTVKAY;{[VA]|[{I|L}G]}GT{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}KAY;{[VA]|[{I|L}G]}GT[YE]VKAY;K{M(Oxidation (M))|F}{M(Oxidation (M))|F}Y[VS]VNP;{[TV]|[{I|L}S]}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}KAY;{[VA]|[{I|L}G]}GEYKM[R{M(Oxidation (M))|F}];{[VA]|[{I|L}G]}GEYK{[TV]|[{I|L}S]}AY;{[TV]|[{I|L}S]}WW{M(Oxidation (M))|F}KAY;{[QV]|[N{I|L}]|[RA]|[KV]}EYTVKAY;[QT]V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}KAY 2.3613;1.8908;1.7256;1.7025;1.6795;1.678;1.6775;1.6378;1.55;1.5249 -;-;-;-;-;-;-;-;-;- 1327 1 2.197 78257.7 0.6299999952316284 2447 4332 6769 HBL1_DMSO_200M_050219_2,6781 HBL1_DMSO_200M_050219_2,6781,SLGFDSIKAY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6782 36.212 396.0 394540.0 25 0 44796.0 + 39112 TYAPSGRSL 9 132 476.2485605856988 950.4825682381976 2 476.2491332888603 MULTI CID FTMS 0 0 0 6769 118247.765625 0.3672389938315494 -3 0.1642112731933593 13 Unmodified _TYAIGVAWA_ ENSG00000163874|ENST00000373087|ZC3H12A 24.67388899826682 0.2172451872415813 4 [YT]AP 4 6 43.06 0.0 0.0 4.5303 0.0 0.0 0.0 515.2588000176174 515.2588000176174 26.86181873724173 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 [YT]AP 4.5303 - 282 + 1 2.197 119531.4 1.0 2448 4332 6769 HBL1_DMSO_200M_050219_2,6782 HBL1_DMSO_200M_050219_2,6782,TYAIGVAWA False False TYAPSGRSL 36.211614 476.24913328886 2148749.5 6769.0 ENSG00000163874|ENST00000373087|ZC3H12A 4.234313567479451 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6783 36.227 800.0 139670.0 25 0 7738.9 + 6499 EAIQRTPKI 9 142 528.3143797677506 1054.614206602301 2 528.3146850466728 MULTI CID FTMS 0 0 0 6769 96851.5 0.6046547471354359 -10 0.3172187805175781 14 Unmodified _EAIQRTPKI_ B2M|p.Y46Cfs*10|1|0.63|ENSG00000166710|chr15:44715491-44715492|TA/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF 61.60191391372663 0.0251951588191061 4 {I|L}EAQ 4 7 31.726 0.0 0.0 3.0083 0.0 0.0 0.0 610.3679903619749 610.3679903619749 14.726438333931991 0.0 0.0 0.0 0 0.0994850021680094 0.8538719643217619 0.4247425010840047 0.3252574989159953 {I|L}EAQ 3.0083 - 334 + 1 2.197 88355.0 0.5299999713897705 2449 4332 6769 HBL1_DMSO_200M_050219_2,6783 HBL1_DMSO_200M_050219_2,6783,EAIQRTPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6785 36.231 53.0 827730.0 25 0 83753.0 + 39918 VFQKPSGVSA 10 72 510.280001919738 1018.545450906276 2 510.2801086306572 MULTI CID FTMS 0 0 0 6784 929789.125 0.5619573879252693 2 -0.0581092834472656 1 Unmodified _VFQKPSGVSA_ ENSG00000189306|ENST00000323013|RRP7A;ENST00000357802.6_1_22:42970741-42976277:-|nuORF 53.40400417844725 0.0601721406801337 4 V{M(Oxidation (M))|F}QK 4 6 39.909 0.0 0.0 3.9183 0.0 0.0 0.0 513.2322624205007 513.2322624205007 -1.4789477908568216 0.0 -1.4789477908568216 0.0 0 0.8494850021680094 0.0 0.0 0.4247425010840047 + V{M(Oxidation (M))|F}QK 3.9183 + + 277 + 1 2.197 39914.6 1.0 2450 4333 6784 HBL1_DMSO_200M_050219_2,6785 HBL1_DMSO_200M_050219_2,6785,VFQKPSGVSA True True VFQKPSGVSA 36.231149 510.280108630657 30641102.0 6784.0 ENSG00000189306|ENST00000323013|RRP7A;;ENST00000357802.6_1_22:42970741-42976277:-|nuORF 9.987429936726889 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6786 36.232 32.0 1847900.0 25 0 290490.0 26272 NQNSQFIQ 8 84 489.7351595460708 977.4557661589416 2 489.7354614138603 MULTI CID FTMS 0 0 0 6784 1588851.375 1.0 0 0.0 2 Unmodified _NQNSQFIQ_ ENSG00000185869|ENST00000391711|ZNF829;nc|ENSG00000185869|Q3KNS6-3|ZNF829 22.736283301280096 0.5659792798204337 4 {[CA]|SS}{I|L}SWDRQ 8 6 + 49.59 0.0 0.0 5.0733 5.0733 75.456 0.0 0.0 0.0 4.731975075880328 5.573002318327468 4.731975075880328 3.979400086720375 0 0.4247425010840047 0.0 0.5 0.4247425010840047 {[CA]|SS}{I|L}SWDRQ;{[CA]|SS}S{I|L}WDRQ;[AG][RD]DG{M(Oxidation (M))|F}{I|L}Q;{[CA]|SS}{I|L}D[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[DA]|[EG]}DRQ;{[CA]|SS}D[TA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q;{[CA]|SS}{[WT]|[RM]}VDRQ;{[CA]|SS}{I|L}D{[WS]|[C(Carbamidomethyl (C)){I|L}]}RQ;{[CA]|SS}{[WT]|[RM]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q 5.0733;4.6662;4.5032;4.3595;4.1794;3.0559;3.0516;2.9749;2.9515;2.877 -;-;-;-;-;-;-;-;-;- 407 + 1 2.197 48684.2 1.0 2451 4333 6784 HBL1_DMSO_200M_050219_2,6786 HBL1_DMSO_200M_050219_2,6786,NQNSQFIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6787 36.234 52.0 1159500.0 25 0 143990.0 + 13733 HQVPAVSSV 9 92 462.25106310834633 922.4875732834928 2 462.2510864138603 MULTI CID FTMS 0 0 0 6784 861521.1875 0.2152755249679421 -8 0.3326568603515625 3 Unmodified _HQVPAVSSV_ ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2 52.268347100219714 0.0353964759249114 4 [HQ]VPAVSSV 9 0 [HQ]VPAV + + 32.479 25.45 4.0311 3.5208 3.5208 47.213 0.0 0.0 0.0 0.0 7.028937514676485 0.0 0.0 0 0.5 0.0 0.7302046884880937 0.0 + + [HQ]VPAVSSV 3.5208 + + 158 + 1 2.197 55321.9 1.0 2452 4333 6784 HBL1_DMSO_200M_050219_2,6787 HBL1_DMSO_200M_050219_2,6787,HQVPAVSSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6788 36.235 79.0 941430.0 25 0 116470.0 + 24188 LYYRDARSY 9 69 402.8685668765291 1205.5838712297873 3 402.8682128787041 MULTI CID FTMS 0 0 0 6784 605254.1875 0.5965266668181997 2 -0.0581092834472656 4 Unmodified _LYYRDARSY_ ENSG00000159377|ENST00000290541|PSMB4;ENST00000474100.1_1_1:151372658-151373852:+|nuORF;ENST00000493673.1_1_1:151373717-151374107:+|nuORF 29.43715596616401 0.1566398223704148 4 {I|L}YYRDY[WK] 8 4 + 73.621 0.0 0.0 6.1066 6.1066 75.283 0.0 0.0 0.0 36.40978057358332 1.5713626090697377 1.5713626090697377 1.5713626090697377 0 0.0 2.0 0.0 0.8494850021680094 {I|L}YYRDY[WK];{I|L}YYRD{[QV]|[N{I|L}]|[RA]|[KV]}SY;{I|L}YYRD[WK]Y;{I|L}YYRYD[WK];{I|L}YY[VG][WR]SY;[RH]Y{[QV]|[N{I|L}]|[RA]|[KV]}[CS][WK] 6.1066;5.9763;5.7109;5.4612;4.6707;0.17996 -;+;-;-;-;- + 143 + 1 2.197 60940.8 1.0 2453 4333 6784 HBL1_DMSO_200M_050219_2,6788 HBL1_DMSO_200M_050219_2,6788,LYYRDARSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6789 36.238 119.0 593640.0 25 0 92520.0 + -1 SVMYKLATT 9 86 515.2675900228874 1028.5206271125746 2 515.2680541872978 MULTI CID FTMS 0 0 0 6784 361234.125 0.0506264430484246 -10 0.3864402770996094 5 Oxidation (M) _SVM(Oxidation (M))YKLATT_ REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8;REV__nc|ENSG00000189195|Q5XKL5|BTBD8 14.838274106304384 0.4350285940865338 4 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K 9 -1 + 69.17 0.0 0.0 6.7252 6.7252 92.521 0.0 0.0 0.0 55.67561760842315 15.348717921153394 15.348717921153394 24.247425010840047 0 0.7134679910804405 2.0 0.2742275032520141 0.3252574989159953 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}Y[PG]TT{I|L}K;[VP][HK]A{M(Oxidation (M))|F}V[MT];{[{M(Oxidation (M))|F}C]|[YS]}YT[PG]T{I|L}K 6.7252;4.3677;1.9738;1.8739;1.3884 -;-;-;-;- 210 + 1 2.197 59652.0 1.0 2454 4333 6784 HBL1_DMSO_200M_050219_2,6789 HBL1_DMSO_200M_050219_2,6789,SVMYKLATT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6790 36.245 382.0 181710.0 25 0 22718.0 8485 ETDELTQSIQ 10 95 582.2757565865962 1162.5369602399924 2 582.2759277224541 MULTI CID FTMS 0 0 0 6784 269793.625 0.9479457487631868 2 -0.0581092834472656 6 Unmodified _ETDELTQSIQ_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;ENST00000557060.1_1_14:64540716-64565614:+|nuORF;nc|ENSG00000054654|Q8WXH0-7|SYNE2;nc|ENSG00000054654|Q8WXH0|SYNE2 18.373094154950223 0.5392593366289069 4 DG{M(Oxidation (M))|F}{I|L}Q 5 7 41.454 0.0 0.0 3.5658 0.0 0.0 584.2686634748062 0.0 584.2686634748062 0.0 28.354706403678875 0.0 0.0 0 1.0 0.0 0.0 0.0 DG{M(Oxidation (M))|F}{I|L}Q 3.5658 - 175 1 2.197 57882.8 1.0 2455 4333 6784 HBL1_DMSO_200M_050219_2,6790 HBL1_DMSO_200M_050219_2,6790,ETDELTQSIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6792 36.253 317.0 395310.0 25 0 56714.0 + 6497 EAIQRTPKI 9 123 352.5453801790373 1054.614311137312 3 352.5449401736259 MULTI CID FTMS 0 0 0 6791 250295.953125 0.6390763069256354 -10 0.4007949829101562 1 Unmodified _EAIQRTPKI_ B2M|p.Y46Cfs*10|1|0.63|ENSG00000166710|chr15:44715491-44715492|TA/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF 22.736283301280096 0.2418982879461534 4 {[CP]|[EA]}{I|L}{I|L}Q[SG]PK{I|L} 10 3 {[CP]|[EA]} + + 22.08 2.0463 1.0227 2.0936 2.0936 44.648 0.0 0.0 0.0 0.0 0.6872191047062941 0.0 0.0 0 0.0 0.0 1.325257498915995 0.4247425010840047 {[CP]|[EA]}{I|L}{I|L}Q[SG]PK{I|L} 2.0936 - 190 + 1 2.197 105158.5 1.0 2456 4334 6791 HBL1_DMSO_200M_050219_2,6792 HBL1_DMSO_200M_050219_2,6792,EAIQRTPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6793 36.267 800.0 190450.0 25 0 19285.0 -1 0 90 616.3298562384265 615.3225797718264 1 616.3296996951103 MULTI CID FTMS 0 0 0 6791 199888.71875 0.8572224815423692 2 -0.0927352905273437 2 4 {[QN]|[E{I|L}]|[KN]}{I|L}E{I|L} 5 -1 + 55.366 0.0 0.0 8.9979 8.9979 92.046 0.0 0.0 0.0 10.14575283941467 16.020599913279625 10.14575283941467 8.979400086720375 0 0.0 1.154901959985743 0.6382104921644451 1.1237125054200234 {[QN]|[E{I|L}]|[KN]}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}{I|L};[Q{I|L}]DQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Q{I|L};[AG]N{I|L}E{I|L};[Q{I|L}]NE{I|L};[Q{I|L}]D[AG]{I|L};[AG]{I|L}DQ{I|L};[AG]D{I|L}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[AG]{I|L} 8.9979;7.5386;7.3491;6.5229;6.0889;6.0494;5.7983;5.6389;5.3091;4.9721 -;-;-;-;-;-;-;-;-;- 343 1 2.197 113694.4 0.75 2457 4334 6791 HBL1_DMSO_200M_050219_2,6793 HBL1_DMSO_200M_050219_2,6793, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6794 36.274 411.0 240300.0 25 0 27645.0 + 32054 RVLEGPAAPSA 11 115 534.2953361760771 1066.576119418954 2 534.2949706912041 MULTI CID FTMS 0 0 0 6791 180872.953125 0.8817698271342903 -1 0.0182533264160156 3 Unmodified _RVLEGPAAPSA_ ENST00000287652.8_1_3:10290629-10291047:+|nuORF 30.7034409873982 0.3712764582118616 4 [PS]A 3 8 31.254 0.0 0.0 2.9304 0.0 0.0 0.0 808.4311663762384 808.4311663762384 6.332946754800375 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.531234684152075 0.0 + [PS]A 2.9304 + + 128 1 2.197 88432.9 1.0 2458 4334 6791 HBL1_DMSO_200M_050219_2,6794 HBL1_DMSO_200M_050219_2,6794,RVLEGPAAPSA False True RVLEGPAAPSA 36.274092 534.294970691204 1475653.25 6791.0 ENST00000287652.8_1_3:10290629-10291047:+|nuORF 5.632136503855388 2.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6795 36.279 241.0 269170.0 25 0 34797.0 37020 TFQQNASSM 9 113 507.2223334907001 1012.4301140482004 2 507.2225829958916 MULTI CID FTMS 0 0 0 6791 156896.484375 0.857524774290077 -1 0.0182533264160156 4 Unmodified _TFQQNASSM_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 22.736283301280096 0.2418982879461534 4 [AG]QN[YR]SSM 9 5 [AG]QN[YR]S + + 22.519 0.23248 0.029945 2.2242 2.2242 44.774 0.0 0.0 0.0 0.0 9.647489879638576 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 [AG]QN[YR]SSM 2.2242 - 436 + 1 2.197 56232.7 1.0 2459 4334 6791 HBL1_DMSO_200M_050219_2,6795 HBL1_DMSO_200M_050219_2,6795,TFQQNASSM False True KQVLDSQPV 36.278596 507.222582995892 1618590.125 6791.0 ENST00000405995.5_1_9:134305515-134305602:+|nuORF 4.59967581431071 2.0 False 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 6796 36.285 343.0 176510.0 25 0 13575.0 + 32541 SANDKVYTV 9 87 498.7542330874181 995.4939132416364 2 498.7535888552666 MULTI CID FTMS 0 0 0 6791 156030.171875 0.8855005946089791 1 -0.03985595703125 5 Unmodified _SANDKVYTV_ ENSG00000079739|ENST00000371084|PGM1;nc|ENSG00000079739|P36871-2|PGM1;nc|ENSG00000079739|P36871-3|PGM1 51.629811660486645 0.0367964933207742 4 {[SA]|[TG]}[DN]KVYTV 9 0 + 49.033 0.0 0.0 4.9255 4.9255 68.818 0.0 0.0 0.0 18.80211241711606 9.577570906191896 9.577570906191896 0.7525749891599531 0 1.0924778212679485 2.0 0.3252574989159953 0.7742275032520141 + + {[SA]|[TG]}[DN]KVYTV;{[SA]|[TG]}[QA]VYTGTV;{[SA]|[TG]}[QA]VTGYTV;{[SA]|[TG]}[QA]{[SA]|[TG]}VYTV;[DN]KVYTGTV;[VP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YTGTV;[DN]KVTGYTV;[DN]K{[SA]|[TG]}VYTV;[VP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TGYTV;[DN]{[SA]|[TG]}KVYTV 4.9255;4.8499;4.7211;4.4002;3.0367;2.9854;2.908;2.5871;2.43;2.1874 +;-;-;-;-;-;-;-;-;- + 296 1 2.197 52925.1 1.0 2460 4334 6791 HBL1_DMSO_200M_050219_2,6796 HBL1_DMSO_200M_050219_2,6796,SANDKVYTV True True SANDKVYTV 36.284815 498.753588855267 1545821.5 6791.0 nc|ENSG00000079739|P36871-3|PGM1;;ENSG00000079739|ENST00000371084|PGM1;;nc|ENSG00000079739|P36871-2|PGM1 5.830794334411621 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6798 36.302 800.0 155710.0 25 0 10840.0 + 21561 LPKEDPTAV 9 146 485.26616294007226 968.5177729469444 2 485.2657653689384 MULTI CID FTMS 0 0 0 6797 135034.234375 0.5894284436929924 3 -0.0840492248535156 1 Unmodified _LPKEDPTAV_ ENSG00000181789|ENST00000314797|COPG1 49.55428908609986 0.0413471690215031 4 [{I|L}P]WW[TP]AV 8 3 + 45.128 0.0 0.0 4.6595 4.6595 68.246 0.0 0.0 0.0 0.975342607707816 14.904630595263413 0.975342607707816 0.975342607707816 0 1.579689690656103 1.2218487496163564 1.0 0.0 [{I|L}P]WW[TP]AV;[TP]{[WT]|[RM]}P[TP]AV;[TP]{[CA]|SS}{I|L}P[TP]AV;WW{I|L}P[TP]AV;[{I|L}P]WWAPTV;[TP]{[WT]|[RM]}PAPTV;{[DA]|[EG]}[VS]{I|L}P[TP]AV;[TP]{[CA]|SS}{I|L}PAPTV;WW{I|L}PAPTV;{NN|[MP]|[D{I|L}]|[EV]}[SG]{I|L}P[TP]AV 4.6595;4.5588;4.3607;4.3278;4.1374;4.0367;3.9656;3.8386;3.8057;3.8025 -;-;-;-;-;-;-;-;-;- 1543 1 2.191 99094.2 0.6200000047683716 2461 4335 6797 HBL1_DMSO_200M_050219_2,6798 HBL1_DMSO_200M_050219_2,6798,LPKEDPTAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6799 36.31 439.0 85755.0 25 0 7063.1 -1 CLLAFVFFDAN 11 73 658.8209807344598 1315.6274085357195 2 658.8207275271416 MULTI CID FTMS 0 0 0 6797 156314.640625 1.0 0 0.0 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))LLAFVFFDAN_ ENSG00000158941|ENST00000308511|CCAR2;ENST00000520536.1_1_8:22475798-22477192:+|nuORF;ENST00000521436.5_1_8:22474947-22476312:+|nuORF;nc|ENSG00000158941|Q8N163-2|CCAR2 17.11289562659939 0.6791789249425932 4 {[DA]|[EG]}[KQ]VV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN 12 -1 + 60.746 0.0 0.0 4.6173 4.6173 68.846 0.0 0.0 0.0 1.419720759070806 9.098233696509112 1.419720759070806 1.419720759070806 0 1.5 1.0969100130080565 1.6237125054200234 0.0 {[DA]|[EG]}[KQ]VV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN;{[SA]|[TG]}A{[NV]|[RG]}VV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN;[QT]{[NV]|[RG]}VV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN;[PS]Q[KT]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN;{[NV]|[RG]}[QT]VV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN;{[NV]|[RG]}V[QT]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN;[PS]K[QT]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN 4.6173;4.5093;4.086;3.8441;3.6284;3.6284;3.4208 -;-;-;-;-;-;- 206 1 2.191 35182.5 1.0 2462 4335 6797 HBL1_DMSO_200M_050219_2,6799 HBL1_DMSO_200M_050219_2,6799,CLLAFVFFDAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6800 36.324 800.0 163850.0 25 0 18578.0 + 29951 QSPCYDRMAS 10 130 579.2391509918297 1156.4637490504592 2 579.2383911013603 MULTI CID FTMS 0 0 0 6797 152998.15625 0.3097102611674636 -8 0.3633918762207031 3 Unmodified _QSPCYDRMAS_ REV__ENSG00000169258|ENST00000303991|GPRIN1;REV__nc|ENSG00000169258|Q7Z2K8-2|GPRIN1 29.84058131909904 0.2982332456971691 4 {[QS]|[NT]}PS 4 -1 36.554 0.0 0.0 3.1609 0.0 0.0 0.0 754.2661858963335 754.2661858963335 22.12939136549785 0.0 0.0 0.0 0 0.5 1.154901959985743 0.3807196863200844 0.0 {[QS]|[NT]}PS 3.1609 - 106 + 1 2.191 100938.1 0.6499999761581421 2463 4335 6797 HBL1_DMSO_200M_050219_2,6800 HBL1_DMSO_200M_050219_2,6800,QSPCYDRMAS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6801 36.338 800.0 120450.0 25 0 11628.0 + 21299 LPENEMLSSK 10 118 574.284908310107 1146.5552636870138 2 574.2844116091728 MULTI CID FTMS 0 0 0 6797 112334.296875 0.9563298266729132 -1 0.03985595703125 4 Unmodified _LPENEMLSSK_ REV__ENSG00000155085|ENST00000424296|AK9;REV__nc|ENSG00000155085|Q5TCS8-5|AK9;REV__nc|ENSG00000155085|Q5TCS8-6|AK9 9.38312468134398 0.6832340498775793 4 [NP]SW{I|L}SAAV 9 -1 28.748 0.0 0.0 2.5073 0.0 0.0 0.0 218.0636605412108 218.0636605412108 14.042938592620724 0.0 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 [NP]SW{I|L}SAAV 2.5073 - 530 1 2.191 78911.1 0.5600000023841858 2464 4335 6797 HBL1_DMSO_200M_050219_2,6801 HBL1_DMSO_200M_050219_2,6801,LPENEMLSSK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6803 36.342 18.0 2908900.0 25 0 344460.0 + 5790 DPPPGSHVI 9 75 459.7377035282235 917.460854123247 2 459.7377807497978 MULTI CID FTMS 0 0 0 6802 2473095.0 0.25186441761977 28 -1.6145896911621094 1 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 28.486842064014134 0.1687311288560894 4 [DP]P 3 6 42.249 0.0 0.0 4.605 0.0 0.0 0.0 605.3056776918595 605.3056776918595 31.411866397379058 0.0 0.0 0.0 0 1.0 2.0 0.6307196863200843 0.0 + [DP]P 4.605 + + 117 1 2.191 45544.8 1.0 2465 4336 6802 HBL1_DMSO_200M_050219_2,6803 HBL1_DMSO_200M_050219_2,6803,DPPPGSHVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6804 36.356 800.0 160120.0 25 0 10898.0 3547 CYCRFFNAF 9 128 585.7445422871036 1169.4745316410072 2 585.7441284060478 MULTI CID FTMS 0 0 0 6802 118362.640625 0.5985565032811844 3 -0.0560150146484375 2 Unmodified _CYCRFFNAF_ ENSG00000159723|ENST00000290953|AGRP 30.22481116460888 0.1466181017706357 4 [AG]P{I|L}C{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F} 11 6 + 74.28 0.0 0.0 6.3516 6.3516 75.904 0.0 0.0 0.0 5.169982497568299 39.66574405820549 5.169982497568299 1.3864714069326425 0 0.7742275032520141 2.0 0.3807196863200844 1.2302046884880935 [AG]P{I|L}C{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F};[AG]NA{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F};[AG]GQ{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F};[AG]GGA{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F};[AG]{I|L}PC{[{M(Oxidation (M))|F}C]|[YS]}QNA{M(Oxidation (M))|F};[AG]P{I|L}C{[{M(Oxidation (M))|F}C]|[YS]}QGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F};[AG]NA{[{M(Oxidation (M))|F}C]|[YS]}[AG]QNA{M(Oxidation (M))|F};[AG]NA{[{M(Oxidation (M))|F}C]|[YS]}Q[AG]NA{M(Oxidation (M))|F};[AG]NA{[{M(Oxidation (M))|F}C]|[YS]}QQGGA{M(Oxidation (M))|F} 6.3516;6.233;5.9685;5.9362;5.6289;5.571;5.5145;5.4525;5.4525;5.4525 -;-;-;-;-;-;-;-;-;- 1533 1 2.191 100208.6 0.6700000166893005 2466 4336 6802 HBL1_DMSO_200M_050219_2,6804 HBL1_DMSO_200M_050219_2,6804,CYCRFFNAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6806 36.362 176.0 269850.0 25 0 64649.0 + 45261 YSDGKLQTV 9 94 505.76127282917406 1009.507992725148 2 505.7620422244072 MULTI CID FTMS 0 0 0 6805 238358.84375 0.9691380769767348 -4 0.129241943359375 1 Unmodified _YSDGKLQTV_ ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1 32.78568957990786 0.1150597335874693 4 YSD 3 6 50.49 0.0 0.0 5.0014 0.0 0.0 0.0 641.3631685846311 641.3631685846311 31.233843202355647 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.5 0.0 + YSD 5.0014 + + 261 + 1 2.191 41854.8 1.0 2467 4337 6805 HBL1_DMSO_200M_050219_2,6806 HBL1_DMSO_200M_050219_2,6806,YSDGKLQTV True True YSDGKLQTV 36.361552 505.762042224407 1774368.875 6805.0 ENSG00000167986|ENST00000301764|DDB1;;nc|ENSG00000167986|Q16531-2|DDB1 7.435424486796061 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6807 36.369 412.0 164990.0 25 0 9556.4 + + 34689 RVEPVTTSV 9 114 493.7726739544863 985.5307949757728 2 494.2773010134697 MULTI CID FTMS 0 0 0 6805 186493.359375 0.011504276898065 -12 0.4618988037109375 2 Unmodified _SPSVERGRV_ ENST00000475124.1_1_3:53880615-53891834:+|nuORF;nc|ENSG00000056736|Q9NRM6-2|IL17RB;ENSG00000056736|ENST00000288167|IL17RB 16.942295170755138 0.3780752226737986 4 {M(Oxidation (M))|F}VTT{[QG]|[NA]} 6 -1 30.45 0.0 0.0 3.0897 0.0 0.0 334.19819838691564 0.0 334.19819838691564 0.0 7.971062485323515 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {M(Oxidation (M))|F}VTT{[QG]|[NA]} 3.0897 - 553 1 2.191 56809.1 1.0 2468 4337 6805 HBL1_DMSO_200M_050219_2,6807 HBL1_DMSO_200M_050219_2,6807,SPSVERGRV False False RVEPVTTSV 36.3689 494.27730101347 6401065.0 6805.0 ENST00000475124.1_1_3:53880615-53891834:+|nuORF;;nc|ENSG00000056736|Q9NRM6-2|IL17RB;;ENSG00000056736|ENST00000288167|IL17RB 4.918198108673096 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6809 36.374 167.0 444890.0 25 0 98988.0 + 35625 SVAGSVERV 9 91 452.2480087683029 902.4814646034058 2 452.2482482790947 MULTI CID FTMS 0 0 0 6808 397809.125 0.6952507254863601 3 -0.1025123596191406 1 Unmodified _SVAGSVERV_ ENSG00000130713|ENST00000372358|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;ENST00000463488.1_1_9:133569202-133574940:+|nuORF;ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2 22.65808497894818 0.2428932432760099 4 [VS]AGSVERV 9 0 + 62.278 0.0 0.0 6.9008 6.9008 87.153 0.0 0.0 0.0 44.17403451429223 6.700236701755316 6.700236701755316 7.971062485323515 0 0.9247425010840048 2.0 0.0 0.0 + + [VS]AGSVERV;[VS]AGSK{[QG]|[NA]}AV;[VS]QSVERV;[VS]AGSKQQV;[VS]A{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAP;[VS]QSK{[QG]|[NA]}AV;[VS]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}AAP;[VS]AWWRV;[VS]AV[SG]ERV;[VS]A{I|L}[YT][H{I|L}] 6.9008;6.0175;5.6289;5.4902;4.7991;4.7397;4.5342;4.3957;4.3821;4.3118 +;-;-;-;-;-;-;-;-;- + 345 + 1 2.191 63111.7 1.0 2469 4338 6808 HBL1_DMSO_200M_050219_2,6809 HBL1_DMSO_200M_050219_2,6809,SVAGSVERV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6810 36.38 302.0 399650.0 25 0 48741.0 + -1 YYHPARLGA 9 110 349.8509236036405 1046.5309414111216 3 349.8504821658134 MULTI CID FTMS 0 0 0 6808 199531.609375 0.7106059047961194 -5 0.1421585083007812 2 Oxidation (M) _LILM(Oxidation (M))PNTET_ nc|ENSG00000213402|Q14761|PTPRCAP 11.494710602746466 0.5255349189887087 4 {[WN]|[YH]}Y 3 -1 30.418 0.0 0.0 2.9066 0.0 0.0 0.0 580.3220540422341 580.3220540422341 6.861818737241734 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.4247425010840047 {[WN]|[YH]}Y 2.9066 - 84 1 2.191 103040.5 1.0 2470 4338 6808 HBL1_DMSO_200M_050219_2,6810 HBL1_DMSO_200M_050219_2,6810,LILMPNTET False False YYHPARLGA 36.379848 349.850482165813 2545017.5 6808.0 nc|ENSG00000213402|Q14761|PTPRCAP 5.094364563624064 3.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 6811 36.394 800.0 174420.0 25 0 14086.0 + 5604 DNSRNLDLD 9 157 531.2465321222103 1060.4785113112205 2 531.2456542849541 MULTI CID FTMS 0 0 0 6808 138971.0625 1.0 0 0.0 3 Unmodified _DNSRNLDLD_ CON__P35908;CON__P35908v2;ENSG00000172867|ENST00000309680|KRT2 40.23920728925047 0.0741434193262949 4 {NN|[MP]|[D{I|L}]|[EV]}DWG{I|L}D{I|L}D 9 4 + 46.792 0.0 0.0 4.4124 4.4124 67.456 0.0 0.0 0.0 1.081717184190829 1.081717184190829 1.081717184190829 1.081717184190829 0 0.961758134947864 1.6989700043360187 0.0 0.9604093769761876 {NN|[MP]|[D{I|L}]|[EV]}DWG{I|L}D{I|L}D;[DN]KDD{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}D{[VA]|[{I|L}G]}WD{I|L}D;[DN]KDD{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L};[{M(Oxidation (M))|F}V]DN{I|L}YYQ;[{M(Oxidation (M))|F}V]D{I|L}NYYQ;[NS]RD{I|L}ND{I|L}D;[DN]KDD{[QV]|[N{I|L}]|[RA]|[KV]}EV;{[QV]|[N{I|L}]|[RA]|[KV]}[MN]{I|L}ND{I|L}D;[{M(Oxidation (M))|F}V]DN[RP]WQ 4.4124;4.3104;3.496;3.4718;3.4491;3.2163;3.1862;3.1749;3.0887;2.974 -;-;-;-;-;-;-;-;-;- 1230 1 2.191 109172.7 0.6100000143051147 2471 4338 6808 HBL1_DMSO_200M_050219_2,6811 HBL1_DMSO_200M_050219_2,6811,DNSRNLDLD True True DNSRNLDLD 36.393679 531.245654284954 1056667.125 6808.0 P35908;;P35908v2;;ENSG00000172867|ENST00000309680|KRT2 3.93505589167277 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 6813 36.41 800.0 159420.0 25 0 21331.0 + -1 DQLWSCFDWS 10 144 672.2738524100004 1342.5331518868006 2 672.2740356326103 MULTI CID FTMS 0 0 0 6812 82135.3359375 0.1468049559540015 -7 0.2556724548339844 1 Carbamidomethyl (C) _DQLWSC(Carbamidomethyl (C))FDWS_ REV__ENST00000409458.3_2_7:23286447-23292970:+|nuORF;REV__ENST00000474157.1_1_7:23286447-23286639:+|nuORF 10.150570793230772 0.6772252923741907 4 [AG]YD[RH]H 7 -1 15.894 0.0 0.0 1.1839 0.0 0.0 0.0 503.1533050452569 503.1533050452569 0.3043745418246679 0.0 0.0 0.0 0 0.6549471895720985 1.0457574905606752 0.5 0.2887254899964357 [AG]YD[RH]H 1.1839 - 2310 1 2.191 93716.8 0.5600000023841858 2472 4339 6812 HBL1_DMSO_200M_050219_2,6813 HBL1_DMSO_200M_050219_2,6813,DQLWSCFDWS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6814 36.424 800.0 166710.0 25 0 24916.0 -1 LNSCSCEENSC 11 139 672.7282164316534 1343.4418799301068 2 672.7284423708916 MULTI CID FTMS 0 0 0 6812 123774.2421875 0.9133113851021047 -2 0.0377616882324218 2 Acetyl (Protein N-term),2 Carbamidomethyl (C) _(Acetyl (Protein N-term))LNSC(Carbamidomethyl (C))SC(Carbamidomethyl (C))EENSC_ ENST00000498816.1_1_10:18629789-18787496:+|nuORF 2.735195868890462 0.8622431031272658 4 [TP]AAVD 6 -1 19.35 0.0 0.0 1.4403 0.0 0.0 0.0 786.1475433424692 786.1475433424692 4.745854058252757 0.0 0.0 0.0 0 0.0 0.958607314841775 0.9876954943324544 0.0 [TP]AAVD 1.4403 - 1285 1 2.191 96734.9 0.5699999928474426 2473 4339 6812 HBL1_DMSO_200M_050219_2,6814 HBL1_DMSO_200M_050219_2,6814,LNSCSCEENSC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6815 36.437 799.0 176900.0 25 0 21822.0 + 2036 SGAPPVRSI 9 134 442.2534332610532 882.4923135889063 2 442.2531005740166 MULTI CID FTMS 0 0 0 6812 103264.2890625 0.3647305418236388 -5 0.1487503051757812 3 Unmodified _APGSPVSLR_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35 18.1463463914782 0.3454829746528889 4 [SG]APE 5 7 31.325 0.0 0.0 3.5496 0.0 0.0 0.0 438.2878880462343 438.2878880462343 18.724505626362667 0.0 0.0 0.0 0 1.0 0.8239087409443188 0.3252574989159953 0.0 [SG]APE 3.5496 - 189 1 2.191 114667.0 1.0 2474 4339 6812 HBL1_DMSO_200M_050219_2,6815 HBL1_DMSO_200M_050219_2,6815,APGSPVSLR False False SGAPPVRSI 36.43737 442.253100574017 3444865.75 6812.0 ENSG00000163002|ENST00000295119|NUP35;;nc|ENSG00000163002|Q8NFH5-2|NUP35 2.3234393199284877 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6817 36.442 108.0 447080.0 25 0 41879.0 -1 SMTKSEPAIR 10 77 568.2923023208621 1134.570051708524 2 568.2925903201103 MULTI CID FTMS 0 0 0 6816 491946.15625 0.5438526045113476 -3 0.08135986328125 1 Oxidation (M) _SM(Oxidation (M))TKSEPAIR_ ENSG00000163491|ENST00000691995|NEK10;ENST00000491627.1_1_3:27353503-27394373:-|nuORF;nc|ENSG00000163491|Q6ZWH5-2|NEK10;nc|ENSG00000163491|Q6ZWH5-3|NEK10;nc|ENSG00000163491|Q6ZWH5-4|NEK10;nc|ENSG00000163491|Q6ZWH5|NEK10 14.838274106304384 0.5985701837916485 4 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 8 -1 40.394 0.0 0.0 3.5603 0.0 0.0 244.1423884696136 0.0 244.1423884696136 0.0 27.317007929073483 0.0 0.0 0 0.0 0.0 0.0 0.6237125054200234 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 3.5603 - 105 + 1 2.191 39102.9 1.0 2475 4340 6816 HBL1_DMSO_200M_050219_2,6817 HBL1_DMSO_200M_050219_2,6817,SMTKSEPAIR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6818 36.448 328.0 320800.0 25 0 27032.0 + 28399 DGRFLLTGSSGSFQ 14 128 368.19345383228887 734.3723547313778 2 368.1929199099541 MULTI CID FTMS 0 0 0 6816 220115.40625 0.4043020090851378 5 -0.2669715881347656 2 Unmodified _PSPHGLAG_ ENSG00000154646|ENST00000284885|TMPRSS15 9.347437153973935 0.7675937258251505 4 {I|L}Q 2 7 30.529 0.0 0.0 4.1571 0.0 0.0 475.21840683274337 0.0 475.21840683274337 0.0 18.36188426947686 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3807196863200844 {I|L}Q 4.1571 - 70 + 1 2.191 91261.0 1.0 2476 4340 6816 HBL1_DMSO_200M_050219_2,6818 HBL1_DMSO_200M_050219_2,6818,PSPHGLAG False False DGRFLLTGSSGSFQ 36.447758 368.192919909954 692017.3125 6816.0 ENSG00000154646|ENST00000284885|TMPRSS15 -0.3955777684847514 4.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6819 36.45 102.0 853590.0 25 0 113860.0 + 38165 TPPTAQVV 8 96 406.7294079739102 811.4442630146204 2 406.7292358279228 MULTI CID FTMS 0 0 0 6816 472394.6875 0.2735301785522482 -6 0.1923484802246093 3 Unmodified _TPPTAQVV_ ENSG00000116489|ENST00000263168|CAPZA1;ENST00000466066.1_1_1:113202257-113212751:+|nuORF 63.562846038646086 0.116059504757595 4 [TP]PTAQVV 8 0 + 39.473 0.0 0.0 4.8645 4.8645 70.008 0.0 0.0 0.0 15.9957546134072 9.731975075880328 9.731975075880328 1.5308998699194376 0 0.6237125054200234 1.3010299956639813 1.4361818737241734 0.0 + + [TP]PTAQVV;[TP]PATQVV;[TP]PAQTVV;[TP]PTA[AG]VV;[TP]PAT[AG]VV;[TP]PA[AG]TVV;[TP][QA]PTVV;[{I|L}A][DP]AQVV;[{I|L}A][DP]A[AG]VV;{[VA]|[{I|L}G]}[EP]AQVV 4.8645;4.6759;4.3678;3.7231;3.5344;3.2263;3.082;2.8933;1.7518;1.6501 +;-;-;-;-;-;-;-;-;- + 113 1 2.191 73069.6 1.0 2477 4340 6816 HBL1_DMSO_200M_050219_2,6819 HBL1_DMSO_200M_050219_2,6819,TPPTAQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6820 36.452 112.0 632450.0 25 0 171310.0 34881 SQGLWSDYSD 10 81 386.49545283620455 1156.4645291088136 3 386.4953185915947 MULTI CID FTMS 0 0 0 6816 313574.9375 0.6712515193537404 -3 0.08135986328125 4 Unmodified _SQGLWSDYSD_ ENSG00000196150|ENST00000417550|ZNF250;nc|ENSG00000196150|P15622-2|ZNF250;nc|ENSG00000196150|P15622|ZNF250 13.042465956692816 0.6287021003332052 4 {[QS]|[NT]}PSV 5 7 31.466 0.0 0.0 2.7209 0.0 0.0 0.0 655.1974914885218 655.1974914885218 16.60341400782185 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 {[QS]|[NT]}PSV 2.7209 - 66 + 1 2.191 67368.3 1.0 2478 4340 6816 HBL1_DMSO_200M_050219_2,6820 HBL1_DMSO_200M_050219_2,6820,SQGLWSDYSD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6821 36.458 294.0 350140.0 25 0 30881.0 + 34934 SQISAEARV 9 123 480.75894886373726 959.5033447942744 2 480.7594482302666 MULTI CID FTMS 0 0 0 6816 265888.875 0.9847232352233832 -1 0.0435981750488281 5 Unmodified _SQISAEARV_ ENSG00000115355|ENST00000436346|CCDC88A;nc|ENSG00000115355|Q3V6T2-2|CCDC88A;nc|ENSG00000115355|Q3V6T2-3|CCDC88A;nc|ENSG00000115355|Q3V6T2-4|CCDC88A;nc|ENSG00000115355|Q3V6T2-5|CCDC88A 27.22323531849824 0.1848086127304535 4 {[QS]|[NT]}{I|L}SAEARV 9 0 + 40.9 0.0 0.0 4.2626 4.2626 76.662 0.0 0.0 0.0 22.623337350737245 5.238238384176341 5.238238384176341 7.958800173440743 0 0.8494850021680094 1.0457574905606752 0.0 0.0 + + {[QS]|[NT]}{I|L}SAEARV;{[QS]|[NT]}{I|L}S{[CA]|SS}PRV;{[QS]|[NT]}VTAEARV;{[QS]|[NT]}{I|L}SAE{[NV]|[RG]}{I|L};{[QS]|[NT]}{I|L}SA[W{I|L}]GV;{[QS]|[NT]}VT{[CA]|SS}PRV;{[QS]|[NT]}VTAE{[NV]|[RG]}{I|L};{[QS]|[NT]}{I|L}V[WK]{[CP]|[EA]};{[QS]|[NT]}VTA[W{I|L}]GV;{[QS]|[NT]}VWWRV 4.2626;3.4331;3.4011;3.2555;2.8221;2.5716;2.394;2.0193;1.9606;1.5422 +;-;-;-;-;-;-;-;-;- + 272 + 1 2.191 80948.7 1.0 2479 4340 6816 HBL1_DMSO_200M_050219_2,6821 HBL1_DMSO_200M_050219_2,6821,SQISAEARV False True SQISAEARV 36.457679 480.759448230267 1400371.375 6816.0 nc|ENSG00000115355|Q3V6T2-2|CCDC88A;;nc|ENSG00000115355|Q3V6T2-5|CCDC88A;;nc|ENSG00000115355|Q3V6T2-4|CCDC88A;;nc|ENSG00000115355|Q3V6T2-3|CCDC88A;;ENSG00000115355|ENST00000436346|CCDC88A 5.200762112935384 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6822 36.471 800.0 211510.0 25 0 22325.0 + 22070 LPPPRASL 8 131 425.7610386944438 849.5075244556876 2 425.7603637576103 MULTI CID FTMS 0 0 0 6816 152386.8125 0.1469398000315191 -7 0.210601806640625 6 Unmodified _LPPPRASL_ ENST00000531472.1_1_19:52901204-52901724:+|nuORF 25.399314129420983 0.5099049743284904 4 {I|L}PPP[WK]{I|L} 7 3 + 53.76 0.0 0.0 6.3284 6.3284 92.121 0.0 0.0 0.0 41.77062918686282 1.984770478451935 1.984770478451935 50.115166698372136 0 0.4247425010840047 2.0 0.0 0.3807196863200844 {I|L}PPP[WK]{I|L};{I|L}[YK][WK]{I|L};{I|L}[{I|L}T][RK][YG] 6.3284;0.42909;0.0039775 -;-;- 123 + 1 2.191 133249.7 0.5799999833106995 2480 4340 6816 HBL1_DMSO_200M_050219_2,6822 HBL1_DMSO_200M_050219_2,6822,LPPPRASL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6824 36.489 800.0 162010.0 25 0 9307.5 5468 DLRKYLNQ 8 169 525.2905972783684 1048.5666416235367 2 525.2926513552666 MULTI CID FTMS 0 0 0 6823 73735.96875 0.333972838453703 6 -0.418304443359375 1 Unmodified _DLRKYLNQ_ ENSG00000104365|ENST00000520810|IKBKB;ENST00000518647.5_1_8:42129618-42174557:+|nuORF;ENST00000520201.5_1_8:42129679-42177019:+|nuORF;nc|ENSG00000104365|O14920-2|IKBKB;nc|ENSG00000104365|O14920-3|IKBKB;nc|ENSG00000104365|O14920-4|IKBKB 23.1484247019978 0.5573009939494978 4 {NN|[MP]|[D{I|L}]|[EV]}Q[YR]KVQ 8 4 + 26.234 0.0 0.0 2.5019 2.5019 66.821 0.0 0.0 0.0 8.199849938126892 3.3715017571890016 3.3715017571890016 3.3715017571890016 0 0.7742275032520141 0.744727494896694 0.0 1.329689690656103 {NN|[MP]|[D{I|L}]|[EV]}Q[YR]KVQ;{NN|[MP]|[D{I|L}]|[EV]}Q[YR]KQV;{NN|[MP]|[D{I|L}]|[EV]}Q[YR]K{I|L}N;{NN|[MP]|[D{I|L}]|[EV]}Q[YR]KN{I|L};{[QN]|[E{I|L}]|[KN]}N[YR]KVQ;{NN|[MP]|[D{I|L}]|[EV]}[AG][YR]KVQ;{[QN]|[E{I|L}]|[KN]}N[YR]KQV;{NN|[MP]|[D{I|L}]|[EV]}[AG][YR]KQV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}[WY]VQ;{[QN]|[E{I|L}]|[KN]}N[YR]K{I|L}N 2.5019;2.1804;1.9328;1.7648;1.7199;1.6186;1.3984;1.2971;1.2198;1.1508 -;-;-;-;-;-;-;-;-;- 1136 + 1 2.175 102386.0 0.5699999928474426 2481 4341 6823 HBL1_DMSO_200M_050219_2,6824 HBL1_DMSO_200M_050219_2,6824,DLRKYLNQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6825 36.503 800.0 176780.0 25 0 19922.0 + 44489 YPAPPPPQA 9 132 469.2424933897632 936.4704338463264 2 469.2426635622978 MULTI CID FTMS 0 0 0 6823 107635.7421875 0.6314447826031958 -3 0.1025123596191406 2 Unmodified _YPAPPPPQA_ ENSG00000168175|ENST00000395468|MAPK1IP1L;ENST00000553976.1_1_14:55529677-55530620:+|nuORF 53.57557251787612 0.0325303259649373 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PAPP 6 4 33.893 0.0 0.0 3.6192 0.0 0.0 0.0 311.13555800080843 311.13555800080843 23.055066573986977 0.0 0.0 0.0 0 0.7059771852360797 1.2218487496163564 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PAPP 3.6192 - 644 1 2.175 113027.9 0.5199999809265137 2482 4341 6823 HBL1_DMSO_200M_050219_2,6825 HBL1_DMSO_200M_050219_2,6825,YPAPPPPQA True True YPAPPPPQA 36.502549 469.242663562298 2875709.5 6823.0 ENSG00000168175|ENST00000395468|MAPK1IP1L;;ENST00000553976.1_1_14:55529677-55530620:+|nuORF 2.283866425355276 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6826 36.516 800.0 216880.0 25 0 13359.0 43916 YGGGGNYNDFG 11 171 560.721765324615 1119.42897771603 2 560.7214233279228 MULTI CID FTMS 0 0 0 6823 91083.1171875 0.0154417986244249 -5 0.1336822509765625 3 Unmodified _YGGGGNYNDFG_ ENSG00000170144|ENST00000392524|HNRNPA3;ENST00000472163.1_1_3:75263799-75264780:+|nuORF;nc|ENSG00000170144|P51991-2|HNRNPA3 14.838274106304384 0.7264935675211688 4 [YG]GGAMGGQS 10 7 53.061 0.0 0.0 4.74 0.0 0.0 0.0 251.0674414213612 251.0674414213612 24.64269276049244 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.2887254899964357 0.75 [YG]GGAMGGQS 4.74 - 6217 1 2.175 129036.7 0.5400000214576721 2483 4341 6823 HBL1_DMSO_200M_050219_2,6826 HBL1_DMSO_200M_050219_2,6826,YGGGGNYNDFG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6827 36.53 800.0 197150.0 25 0 26747.0 + 6500 EAIQRTPKI 9 147 528.3143797677506 1054.614206602301 2 528.3144409060478 MULTI CID FTMS 0 0 0 6823 94174.7578125 0.587943546270921 -1 0.0340690612792968 4 Unmodified _EAIQRTPKI_ B2M|p.Y46Cfs*10|1|0.63|ENSG00000166710|chr15:44715491-44715492|TA/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF 93.93812099017352 0.0133843357737428 4 EA{I|L}QRTPK{I|L} 9 0 + 76.726 0.0 0.0 7.2753 7.2753 86.734 0.0 0.0 0.0 12.661644047406014 6.4145161104794965 6.4145161104794965 6.4145161104794965 0 1.9749073637206087 1.3010299956639813 0.4247425010840047 0.3252574989159953 + + EA{I|L}QRTPK{I|L};EA{I|L}QRTP{I|L}K;EA{I|L}QRT{I|L}PK;EA{I|L}[AG]RTPK{I|L};{I|L}AEQRTPK{I|L};EA{I|L}[AG]RTP{I|L}K;EA{I|L}[AG]RT{I|L}PK;{I|L}AEQRTP{I|L}K;{I|L}AEQRT{I|L}PK;{I|L}AE[AG]RTPK{I|L} 7.2753;6.667;6.6035;6.4021;6.0747;5.7939;5.7304;5.4664;5.4029;5.2015 +;-;-;-;-;-;-;-;-;- + 589 + 1 2.175 124243.1 0.5199999809265137 2484 4341 6823 HBL1_DMSO_200M_050219_2,6827 HBL1_DMSO_200M_050219_2,6827,EAIQRTPKI True True EAIQRTPKI 36.530212 528.314440906048 23343349.5 6823.0 ENST00000559720.5_1_15:45003705-45007919:+|nuORF;;ENSG00000166710|ENST00000648006|B2M;;B2M|p.Y46Cfs*10|1|0.63|ENSG00000166710|chr15:44715491-44715492|TA/-|frameshift_variant 3.7464147408803306 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6829 36.535 9.8 6409500.0 25 0 1425200.0 + 36219 SVYLKEQY 8 66 515.2675900228874 1028.5206271125746 2 515.2681152224541 MULTI CID FTMS 0 0 0 6828 6593809.5 0.9241129174158484 -1 0.0586929321289062 1 Unmodified _SVYLKEQY_ REV__ENST00000548132.1_1_12:120592933-120593466:-|nuORF 10.823927491677226 0.7510103885582552 4 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K 9 -1 + 77.824 0.0 0.0 7.5666 7.5666 95.016 0.0 0.0 0.0 63.38727931051733 15.198466416439205 15.198466416439205 24.24742501084006 0 0.7742275032520141 2.0 0.3252574989159953 0.2215141619232908 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}Y[PG]TT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}YT[PG]T{I|L}K 7.5666;5.2091;3.0227;2.3431 -;-;-;- 108 + 1 2.158 55747.7 1.0 2485 4342 6828 HBL1_DMSO_200M_050219_2,6829 HBL1_DMSO_200M_050219_2,6829,SVYLKEQY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6830 36.536 19.0 2685800.0 25 0 310680.0 + 13734 HQVPAVSSV 9 77 462.25106310834633 922.4875732834928 2 462.2509338259697 MULTI CID FTMS 0 0 0 6828 3245302.0 0.8109308301016249 1 -0.0054512023925781 2 Unmodified _HQVPAVSSV_ ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2;nc|ENSG00000204256|P25440-3|BRD2;nc|ENSG00000204256|P25440-4|BRD2 39.957323273325 0.0756908302845263 4 [HQ]V[PA]VSSV 9 0 [HQ]V[PA]V + + 32.039 15.418 2.4421 3.4731 3.4731 47.091 0.0 0.0 0.0 0.0 16.620768972555595 0.0 0.0 0 0.5 0.0 0.6861818737241735 0.0 + + [HQ]V[PA]VSSV 3.4731 + + 90 + 1 2.158 48118.2 1.0 2486 4342 6828 HBL1_DMSO_200M_050219_2,6830 HBL1_DMSO_200M_050219_2,6830,HQVPAVSSV True True HQVPAVSSV 36.535689 462.25093382597 58630904.0 6828.0 ENSG00000204256|ENST00000374825|BRD2;;nc|ENSG00000204256|P25440-2|BRD2;;nc|ENSG00000204256|P25440-4|BRD2;;nc|ENSG00000204256|P25440-3|BRD2 7.76594352722168 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6832 36.541 148.0 371970.0 25 0 37052.0 + 4323 DARSYTAAV 9 88 477.2372678459737 0 477.2382995486259 PEAK CID FTMS 0 0 0 6831 227882.28125 0.1537881760832694 -1 0.0054512023925781 1 Unmodified _DARSYTAAV_ ENSG00000108389|ENST00000682306|MTMR4;nc|ENSG00000108389|Q9NYA4|MTMR4 19.256988751693697 0.2078072434435185 4 A 1 8 16.99 0.0 0.0 1.7838 0.0 0.0 764.3434646696834 114.05658899478748 878.4000536644709 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 + A 1.7838 + + 85 + 1 2.158 48700.9 1.0 2487 4343 6831 HBL1_DMSO_200M_050219_2,6832 HBL1_DMSO_200M_050219_2,6832,DARSYTAAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6833 36.544 170.0 594820.0 25 0 99309.0 + 9762 FMQEKARQL 9 111 384.2059432591195 1149.5960003775583 3 384.2052795290947 MULTI CID FTMS 0 0 0 6831 312742.90625 0.8585803402090237 -1 0.0054512023925781 2 Unmodified _FMQEKARQL_ ENSG00000101057|ENST00000217026|MYBL2;nc|ENSG00000101057|P10244-2|MYBL2 34.40172386719151 0.1061884637610825 4 AKEQME 6 8 48.668 0.0 0.0 4.2335 0.0 0.0 415.2555103986344 0.0 415.2555103986344 0.0 28.223010016729653 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.8494850021680094 AKEQME 4.2335 - 135 1 2.158 85486.8 1.0 2488 4343 6831 HBL1_DMSO_200M_050219_2,6833 HBL1_DMSO_200M_050219_2,6833,FMQEKARQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6834 36.548 212.0 545550.0 25 0 68696.0 + 6498 EAIQRTPKI 9 134 352.5453801790373 1054.614311137312 3 352.5447265505791 MULTI CID FTMS 0 0 0 6831 278022.625 0.7098703363295573 -1 0.0054512023925781 3 Unmodified _EAIQRTPKI_ B2M|p.Y46Cfs*10|1|0.63|ENSG00000166710|chr15:44715491-44715492|TA/-|frameshift_variant;ENSG00000166710|ENST00000648006|B2M;ENST00000559720.5_1_15:45003705-45007919:+|nuORF 21.53697664764585 0.2571576504437394 4 {[CP]|[EA]}{I|L}Q{I|L} 5 4 20.19 0.0 0.0 1.9144 0.0 0.0 0.0 497.2824729998354 497.2824729998354 2.698405410982616 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {[CP]|[EA]}{I|L}Q{I|L} 1.9144 - 141 + 1 2.158 96261.5 1.0 2489 4343 6831 HBL1_DMSO_200M_050219_2,6834 HBL1_DMSO_200M_050219_2,6834,EAIQRTPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6835 36.552 227.0 489380.0 25 0 43494.0 -1 0 147 336.1121268005461 670.2097006678922 2 336.1116515994072 MULTI CID FTMS 0 0 0 6831 203974.40625 0.5142172761814576 -3 0.0982131958007812 4 4 P{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 2.455 0.0 0.0 408.07738750648895 0.0 408.07738750648895 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F} 2.455 - 89 + 1 2.158 90895.6 1.0 2490 4343 6831 HBL1_DMSO_200M_050219_2,6835 HBL1_DMSO_200M_050219_2,6835, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6836 36.556 216.0 278660.0 25 0 30614.0 42303 VSSTWDRQ 8 90 489.7351595460708 977.4557661589416 2 489.7340270876884 MULTI CID FTMS 0 0 0 6831 193164.78125 0.1215751103529114 10 -0.6853446960449219 5 Unmodified _VSSTWDRQ_ ENSG00000157500|ENST00000288266|APPL1;ENST00000482800.5_1_3:57261911-57301862:+|nuORF 14.838274106304384 0.6917062315640577 4 {[CA]|SS}S{I|L}W[RD]Q 8 2 + 42.44 0.0 0.0 4.3419 4.3419 71.598 0.0 0.0 0.0 30.450397039808763 3.2783248807594845 3.2783248807594845 3.293037728310246 0 0.4247425010840047 0.0 0.5 0.3807196863200844 {[CA]|SS}S{I|L}W[RD]Q;{[CA]|SS}S{I|L}DR[VS]Q;{[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}D{I|L}SR[VS]Q;{[CA]|SS}S{I|L}DRQSV;{[CA]|SS}S{I|L}DRNTV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[DA]|[EG]}[RD]Q;{[CA]|SS}D{I|L}SRQSV;{[CA]|SS}D{I|L}SRNTV;{[CA]|SS}S{I|L}DR[AG]SV 4.3419;4.005;3.6736;3.5169;3.1099;2.8613;2.7316;2.6218;2.3732;2.1679 -;-;-;-;-;-;-;-;-;- 507 + 1 2.158 53909.6 1.0 2491 4343 6831 HBL1_DMSO_200M_050219_2,6836 HBL1_DMSO_200M_050219_2,6836,VSSTWDRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6837 36.57 800.0 156440.0 25 0 8023.0 + 9763 FMQEKARQL 9 124 575.8051377579578 1149.5957225827156 2 575.8053466677666 MULTI CID FTMS 0 0 0 6831 160718.765625 1.0 0 0.0 6 Unmodified _FMQEKARQL_ ENSG00000101057|ENST00000217026|MYBL2;nc|ENSG00000101057|P10244-2|MYBL2 63.960520009940105 0.0238892913700936 4 AKEQME 6 8 67.81 0.0 0.0 5.8986 0.0 0.0 415.25593764472814 0.0 415.25593764472814 0.0 49.82152649253392 0.0 0.0 0 1.0044321917401078 0.0 0.7614393726401688 0.75 AKEQME 5.8986 - 392 1 2.158 98206.0 0.7200000286102295 2492 4343 6831 HBL1_DMSO_200M_050219_2,6837 HBL1_DMSO_200M_050219_2,6837,FMQEKARQL True True FMQEKARQL 36.570176 575.805346667767 3603561.5625 6831.0 nc|ENSG00000101057|P10244-2|MYBL2;;ENSG00000101057|ENST00000217026|MYBL2 6.671853701273601 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6838 36.578 458.0 504500.0 25 0 40347.0 + 4302 DARIVINRA 9 188 343.205495261509 1026.594656384727 3 343.2046996951103 MULTI CID FTMS 0 0 0 6831 168368.921875 0.4505686292727477 -1 0.0054512023925781 7 Unmodified _DARIVINRA_ ENSG00000101182|ENST00000370873|PSMA7;ENST00000484488.5_1_20:60714188-60718428:-|nuORF;nc|ENSG00000101182|O14818-2|PSMA7;nc|ENSG00000101182|O14818-4|PSMA7 37.77132515983256 0.0876909340306915 4 DAR{I|L}V{I|L}ANR 9 2 + 83.124 0.0 0.0 8.0971 8.0971 86.494 0.0 0.0 0.0 72.3782633303496 14.69273760456403 14.69273760456403 4.527712246842484 0 1.416386562212267 1.6989700043360187 0.0 1.274227503252014 DAR{I|L}V{I|L}ANR;DAR{I|L}V{I|L}NAR;DAR{I|L}VA{I|L}NR;DAR{I|L}V{I|L}AGGR;DAR{I|L}V{I|L}GGAR;DAR{I|L}VA{I|L}GGR;DAR{I|L}VA[VG]AR;W[VG]{I|L}V{I|L}ANR;DA[VG]{I|L}V{[QN]|[E{I|L}]|[KN]}{I|L}V;DAR{I|L}QVVAR 8.0971;7.6561;7.5617;7.2001;6.7591;6.6647;6.2236;4.9089;4.8148;4.6655 -;-;-;-;-;-;-;-;-;- 610 + 1 2.158 186684.0 1.0 2493 4343 6831 HBL1_DMSO_200M_050219_2,6838 HBL1_DMSO_200M_050219_2,6838,DARIVINRA True True DARIVINRA 36.578284 343.20469969511 1625243.75 6831.0 ENST00000484488.5_1_20:60714188-60718428:-|nuORF;;ENSG00000101182|ENST00000370873|PSMA7;;nc|ENSG00000101182|O14818-2|PSMA7;;nc|ENSG00000101182|O14818-4|PSMA7 5.852272748947144 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6839 36.592 800.0 165460.0 25 0 17618.0 + 8040 ENKSCNDKLQ 10 137 618.286695964953 1234.5588389967058 2 618.2869750857353 MULTI CID FTMS 0 0 0 6831 137730.078125 0.5013865206034481 -1 0.0054512023925781 8 Carbamidomethyl (C) _ENKSC(Carbamidomethyl (C))NDKLQ_ ENSG00000138193|ENST00000371380|PLCE1;nc|ENSG00000138193|Q9P212-2|PLCE1 60.07390631473393 0.0363923079357811 4 [AG]DERQDG{M(Oxidation (M))|F}{I|L}Q 11 8 + 83.084 0.0 0.0 6.7299 6.7299 77.76 0.0 0.0 0.0 1.690266026773486 9.128498242810991 1.690266026773486 1.690266026773486 0 1.805462187404089 0.958607314841775 0.3494850021680094 0.9489700043360187 [AG]DERQDG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}ERQDG{M(Oxidation (M))|F}{I|L}Q;[AG]DE[VG]QDG{M(Oxidation (M))|F}{I|L}Q;[AG]DER[AG]DG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}ER[AG]DG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}E[VG]QDG{M(Oxidation (M))|F}{I|L}Q;[AG]DER{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}E[VG][AG]DG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}ER{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;[AG]DE[VG][AG]DG{M(Oxidation (M))|F}{I|L}Q 6.7299;6.5929;5.9904;5.9904;5.8506;5.8506;5.1661;5.1112;5.0327;4.4848 -;-;-;-;-;-;-;-;-;- 983 1 2.158 101437.9 0.699999988079071 2494 4343 6831 HBL1_DMSO_200M_050219_2,6839 HBL1_DMSO_200M_050219_2,6839,ENKSCNDKLQ True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6840 36.606 800.0 33526.0 25 0 4218.1 + -1 QIACIGTEDEW 11 49 661.2885088214364 0 661.2900268435478 PEAK CID FTMS 0 0 0 6831 141802.03125 1.0 0 0.0 9 Carbamidomethyl (C) _QIAC(Carbamidomethyl (C))IGTEDEW_ REV__ENST00000298832.13_1_14:76127654-76129423:+|nuORF 5.296884461304476 0.47618401536486 4 AGAA 4 -1 17.423 0.0 0.0 1.3193 0.0 0.0 749.3218163715852 298.08393274478755 1047.4057491163728 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AGAA 1.3193 - 41 + 1 2.158 30230.1 0.6700000166893005 2495 4343 6831 HBL1_DMSO_200M_050219_2,6840 HBL1_DMSO_200M_050219_2,6840,QIACIGTEDEW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6841 36.613 368.0 276210.0 25 0 47539.0 + 24400 MFPERVRSA 9 91 364.8592125722053 1091.5558083168155 3 364.8580505251884 MULTI CID FTMS 0 0 0 6831 134019.296875 0.441342973422691 -11 0.3974838256835937 10 Unmodified _MFPERVRSA_ ENSG00000100216|ENST00000216034|TOMM22;ENST00000492561.1_1_22:39078186-39079843:+|nuORF 22.736283301280096 0.2418982879461534 4 M{M(Oxidation (M))|F}[EP]R 5 4 34.08 0.0 0.0 3.1222 0.0 0.0 0.0 428.22715173892817 428.22715173892817 19.387568628841265 0.0 0.0 0.0 0 0.0 0.0 0.0 1.1861818737241734 + M{M(Oxidation (M))|F}[EP]R 3.1222 + + 55 + 1 2.158 89520.1 1.0 2496 4343 6831 HBL1_DMSO_200M_050219_2,6841 HBL1_DMSO_200M_050219_2,6841,MFPERVRSA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6842 36.628 800.0 116820.0 25 0 24533.0 + -1 SEREEQNMIEP 11 113 689.2993144000023 0 689.2989379763603 PEAK CID FTMS 0 0 0 6831 128966.453125 0.9787723339036812 -1 0.0054512023925781 11 Oxidation (M) _SEREEQNM(Oxidation (M))IEP_ REV__ENSG00000172262|ENST00000682664|ZNF131;REV__nc|ENSG00000172262|P52739-2|ZNF131 13.042465956692816 0.4221659143281722 4 {I|L}ESD 4 -1 19.329 0.0 0.0 1.4041 0.0 0.0 706.3063791888734 223.0729921930297 929.3793713819032 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.0 {I|L}ESD 1.4041 - 110 + 1 2.158 70069.8 0.6399999856948853 2497 4343 6831 HBL1_DMSO_200M_050219_2,6842 HBL1_DMSO_200M_050219_2,6842,SEREEQNMIEP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6843 36.642 800.0 143840.0 25 0 9449.3 + 21176 LPCQAQEKV 9 157 508.2659722992083 1014.5173916652166 2 508.2662231326103 MULTI CID FTMS 0 0 0 6831 118475.0078125 0.1296679004588927 12 -0.7943611145019531 12 Unmodified _LPCQAQEKV_ ENST00000504562.1_1_5:40834363-40834613:-|nuORF 21.53697664764585 0.2571576504437394 4 {I|L}PCQ 4 5 49.647 0.0 0.0 4.8937 0.0 0.0 0.0 570.2895601861936 570.2895601861936 34.22872795449586 0.0 0.0 0.0 0 0.6203715150305281 2.0 0.0 0.0 + {I|L}PCQ 4.8937 + + 299 + 1 2.158 93804.3 0.5799999833106995 2498 4343 6831 HBL1_DMSO_200M_050219_2,6843 HBL1_DMSO_200M_050219_2,6843,LPCQAQEKV False True LPCQAQEKV 36.641684 508.26622313261 6805484.0 6831.0 ENST00000504562.1_1_5:40834363-40834613:-|nuORF 4.987004121144612 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6844 36.651 514.0 235890.0 25 0 22749.0 -1 YGEKCESCL 9 153 573.2333603475945 1144.452167761989 2 573.2342407107353 MULTI CID FTMS 0 0 0 6831 97211.5234375 0.5640004017736421 -1 0.0054512023925781 13 2 Carbamidomethyl (C) _YGEKC(Carbamidomethyl (C))ESC(Carbamidomethyl (C))L_ ENSG00000105429|ENST00000251268|MEGF8;nc|ENSG00000105429|Q7Z7M0-2|MEGF8 13.50788311687929 0.4710407108020397 4 [YG]AV 4 -1 22.892 0.0 0.0 2.0003 0.0 0.0 0.0 751.2403201880232 751.2403201880232 9.254499489963074 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [YG]AV 2.0003 - 459 1 2.158 96263.7 1.0 2499 4343 6831 HBL1_DMSO_200M_050219_2,6844 HBL1_DMSO_200M_050219_2,6844,YGEKCESCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6846 36.657 164.0 804900.0 25 0 95231.0 + -1 NTCWWYDL 8 106 579.2391509918297 1156.4637490504592 2 579.2395507693291 MULTI CID FTMS 0 0 0 6845 300150.4375 0.6075868668362039 1 -0.0537490844726562 1 Carbamidomethyl (C) _NTC(Carbamidomethyl (C))WWYDL_ REV__ENSG00000173137|ENST00000308860|ADCK5;REV__ENST00000532190.2_1_8:145615874-145615982:+|nuORF 19.438996006549623 0.6237395211498085 4 {[QS]|[NT]}PS 4 -1 30.539 0.0 0.0 2.6407 0.0 0.0 0.0 754.266404686458 754.266404686458 19.301667623768903 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.2887254899964357 0.0 {[QS]|[NT]}PS 2.6407 - 53 + 1 2.138 102524.9 1.0 2500 4344 6845 HBL1_DMSO_200M_050219_2,6846 HBL1_DMSO_200M_050219_2,6846,NTCWWYDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6847 36.664 378.0 183030.0 25 0 9487.2 + 38523 TSPSPRRSV 9 106 493.7726739544863 985.5307949757728 2 494.2770873904228 MULTI CID FTMS 0 0 0 6845 225025.59375 0.0138812274513541 -5 0.2568206787109375 2 Unmodified _TSPSPRRSV_ REV__ENST00000543035.5_2_12:3068990-3120181:+|nuORF 16.942295170755138 0.3780752226737986 4 [VS]PTPVTT 8 -1 39.641 0.0 0.0 4.0223 0.0 0.0 0.0 200.0769124896977 200.0769124896977 17.730012720637376 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.8494850021680094 0.0 [VS]PTPVTT 4.0223 - 658 1 2.138 58140.0 1.0 2501 4344 6845 HBL1_DMSO_200M_050219_2,6847 HBL1_DMSO_200M_050219_2,6847,TSPSPRRSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6848 36.665 19.0 2776600.0 25 0 512650.0 + 13667 HPYPPGPGV 9 68 460.7355712000413 919.4565894668826 2 460.7348510622978 MULTI CID FTMS 0 0 0 6845 2788585.5 0.88278901490842 1 -0.0537490844726562 3 Unmodified _HPYPPGPGV_ ENSG00000171566|ENST00000499023|PLRG1;ENST00000512719.5_1_4:155467261-155471460:-|nuORF 56.04830969593885 0.0282699710924866 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HPPG[PG]V 9 2 + 55.339 0.0 0.0 6.0186 6.0186 82.393 0.0 0.0 0.0 6.478174818886373 10.347621062592118 6.478174818886373 6.478174818886373 0 1.6237125054200234 1.0457574905606752 1.25 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HPPG[PG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YPPG[PG]V;[PG]{[QD]|[EN]|[WG]|[KD]|[RS]}PPG[RP];[PG]PGWPG[PG]V;[PG]PGPWG[PG]V;[PG]PH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PG]V;[PG]{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RP];[PS]{[VA]|[{I|L}G]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RP] 6.0186;5.3141;4.8932;4.6478;3.3965;3.3117;1.4142;0.39498;0.12308 -;+;-;-;-;-;-;-;- + 210 1 2.138 48456.4 1.0 2502 4344 6845 HBL1_DMSO_200M_050219_2,6848 HBL1_DMSO_200M_050219_2,6848,HPYPPGPGV True True HPYPPGPGV 36.665261 460.734851062298 61653484.0 6845.0 ENSG00000171566|ENST00000499023|PLRG1;;ENST00000512719.5_1_4:155467261-155471460:-|nuORF 8.277580738067627 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6849 36.668 162.0 1429900.0 25 0 211350.0 -1 LTSTTSTC 8 99 435.6975691876442 869.3805854420884 2 435.6974975466728 MULTI CID FTMS 0 0 0 6845 846286.9375 0.5266863925579427 -1 0.1150093078613281 4 Carbamidomethyl (C) _LTSTTSTC(Carbamidomethyl (C))_ ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1;nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1 9.347437153973935 0.7675937258251505 4 {I|L}T 2 -1 18.201 0.0 0.0 2.0936 0.0 0.0 0.0 652.2267677280995 652.2267677280995 7.4041782993998595 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {I|L}T 2.0936 + + 117 + 1 2.138 181040.7 1.0 2503 4344 6845 HBL1_DMSO_200M_050219_2,6849 HBL1_DMSO_200M_050219_2,6849,LTSTTSTC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6850 36.67 29.0 1597800.0 25 0 152260.0 41112 VNPMFRGYAQ 10 66 591.7898531957247 1181.5651534582494 2 591.7898437380791 MULTI CID FTMS 0 0 0 6845 597726.9375 0.3879217422463158 -4 0.2132225036621093 5 Unmodified _VNPMFRGYAQ_ ENSG00000136878|ENST00000372429|USP20 6.723162845929126 0.6955379296933136 4 GK 2 9 12.717 0.0 0.0 1.0762 0.0 0.0 422.1772883872554 571.2644747369749 993.4417631242302 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 GK 1.0762 - 104 + 1 2.138 39519.3 1.0 2504 4344 6845 HBL1_DMSO_200M_050219_2,6850 HBL1_DMSO_200M_050219_2,6850,VNPMFRGYAQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6851 36.673 176.0 843540.0 25 0 95813.0 + -1 GYCWCFYC 8 108 579.6953175248902 1157.3760821165804 2 579.6960327029228 MULTI CID FTMS 0 0 0 6845 335317.0 0.5134499593982811 -1 0.1150093078613281 6 2 Carbamidomethyl (C) _GYC(Carbamidomethyl (C))WC(Carbamidomethyl (C))FYC_ REV__ENST00000491103.5_1_6:10748006-10756744:+|nuORF 6.354104778181461 0.7857632046190106 4 MSS 3 -1 30.247 0.0 0.0 2.6134 0.0 0.0 0.0 849.2495902558974 849.2495902558974 5.186143099099851 0.0 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 MSS 2.6134 - 79 + 1 2.138 116134.1 1.0 2505 4344 6845 HBL1_DMSO_200M_050219_2,6851 HBL1_DMSO_200M_050219_2,6851,GYCWCFYC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6852 36.687 800.0 272110.0 25 0 35850.0 -1 YDHMIDDSM 9 178 571.7125467501531 1141.4105405671062 2 571.7133666872978 MULTI CID FTMS 0 0 0 6845 227193.921875 0.7343281430830769 -1 0.1150093078613281 7 Oxidation (M) _YDHM(Oxidation (M))IDDSM_ ENSG00000148702|ENST00000351270|HABP2;nc|ENSG00000148702|Q14520-2|HABP2 36.04419817259434 0.0971720506436186 4 [YG]GGG{[{M(Oxidation (M))|F}D]|MM}HDSM 11 -1 + 64.127 0.0 0.0 5.6182 5.6182 78.241 0.0 0.0 0.0 40.14275160646923 1.415379984277628 1.415379984277628 4.273947874410027 0 2.147940008672037 2.0 0.5649093276264391 0.0 [YG]GGG{[{M(Oxidation (M))|F}D]|MM}HDSM;[YG]GGG[EP][C(Carbamidomethyl (C))Q]SM;[YG]GGG[EP][C(Carbamidomethyl (C))S]QM;[YG]GN{[{M(Oxidation (M))|F}D]|MM}HDSM;[YG]NG{[{M(Oxidation (M))|F}D]|MM}HDSM;[MD][DP]EYGGGAM;[YG]NG[EP][C(Carbamidomethyl (C))S]QM;[YG]G[C(Carbamidomethyl (C))S][EP]GGGAM;[YG]G[C(Carbamidomethyl (C))S][EP]GNAM;[YG]N[CS][EP]GGGAM 5.6182;5.2438;4.8371;4.7572;4.7086;4.7084;4.6991;4.6984;4.5572;4.5527 -;-;-;-;-;-;-;-;-;- 4304 + 1 2.138 162549.6 0.8700000047683716 2506 4344 6845 HBL1_DMSO_200M_050219_2,6852 HBL1_DMSO_200M_050219_2,6852,YDHMIDDSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6853 36.701 800.0 193710.0 25 0 13177.0 + 17910 KQTPDFHTV 9 184 536.7747492606479 1071.5349455880958 2 536.7745849490166 MULTI CID FTMS 0 0 0 6845 190167.4375 0.8364058846523258 -4 0.2132225036621093 8 Unmodified _KQTPDFHTV_ ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733207-65733809:+|nuORF 72.96794272382148 0.0199516581995792 4 [VG][PS]C(Carbamidomethyl (C))PVTQK 10 8 + 36.308 0.0 0.0 3.3884 3.3884 62.792 0.0 0.0 0.0 0.3950016385110118 0.8247700685076467 0.3950016385110118 0.3950016385110118 0 0.0 2.0 0.6109243748081782 0.4247425010840047 [VG][PS]C(Carbamidomethyl (C))PVTQK;{[{M(Oxidation (M))|F}H]|[RQ]}TDPVTQK;[DP]KC(Carbamidomethyl (C))PVTQK;[{I|L}A]{[WN]|[YH]}DPTQK;{[{M(Oxidation (M))|F}H]|[RQ]}TVDPTQK;[AG]KT[DP]{M(Oxidation (M))|F}HS{I|L};[VG][PS]C(Carbamidomethyl (C))VPTQK;{[{M(Oxidation (M))|F}H]|[RQ]}TDVPTQK;[VG][PS]C(Carbamidomethyl (C))PTVQK;[PS]VGC(Carbamidomethyl (C))PVTQK 3.3884;3.3516;3.267;3.1165;3.0196;2.9155;2.8552;2.8184;2.7788;2.7618 -;-;-;-;-;-;-;-;-;- 3603 1 2.138 118092.8 0.7699999809265137 2507 4344 6845 HBL1_DMSO_200M_050219_2,6853 HBL1_DMSO_200M_050219_2,6853,KQTPDFHTV True True KQTPDFHTV 36.700713 536.774584949017 7813172.5 6845.0 ENST00000583108.5_1_17:65733207-65733809:+|nuORF;;ENSG00000130935|ENST00000253247|NOL11 7.6398857434590655 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6854 36.704 198.0 257030.0 25 0 43264.0 + 5069 DGYEQAARV 9 87 504.7409398526873 1007.4673267721746 2 504.7406494021416 MULTI CID FTMS 0 0 0 6845 180550.734375 0.0006190619475781 107 -5.021415710449219 9 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 24.020572477871973 0.2255576514309169 4 EQAARV 6 3 34.262 0.0 0.0 3.4008 0.0 0.0 335.1116345019836 0.0 335.1116345019836 0.0 26.960179168349896 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.3054621874040891 + EQAARV 3.4008 + + 77 + 1 2.138 44844.2 1.0 2508 4344 6845 HBL1_DMSO_200M_050219_2,6854 HBL1_DMSO_200M_050219_2,6854,DGYEQAARV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6856 36.709 51.0 1205400.0 25 0 320080.0 + 38166 TPPTAQVV 8 75 406.7294079739102 811.4442630146204 2 406.7290527224541 MULTI CID FTMS 0 0 0 6855 1401501.375 0.811509806288775 -1 0.0537490844726562 1 Unmodified _TPPTAQVV_ ENSG00000116489|ENST00000263168|CAPZA1;ENST00000466066.1_1_1:113202257-113212751:+|nuORF 63.562846038646086 0.116059504757595 4 [TP]PATQVV 8 2 + 59.558 0.0 0.0 7.3397 7.3397 78.718 0.0 0.0 0.0 17.174617874626037 44.07312836760731 17.174617874626037 1.1670532451996252 0 0.8182503180159344 1.3010299956639813 1.5 0.0 [TP]PATQVV;[TP]PTAQVV;[TP]PAQTVV;[TP]PAT[AG]VV;[TP]PTA[AG]VV;[TP]APTQVV;[TP]PA[AG]TVV;[TP]APQTVV;[TP]AQPTVV;[TP]APT[AG]VV 7.3397;7.1959;6.5679;6.1983;6.0545;5.6403;5.4265;4.8685;4.6216;4.4989 -;+;-;-;-;-;-;-;-;- + 290 1 2.122 54578.6 1.0 2509 4345 6855 HBL1_DMSO_200M_050219_2,6856 HBL1_DMSO_200M_050219_2,6856,TPPTAQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6857 36.713 227.0 341520.0 25 0 27182.0 + 8850 EYVSSQLGRP 10 102 568.2923023208621 1134.570051708524 2 568.2927123904228 MULTI CID FTMS 0 0 0 6855 357089.5 0.3947668909521129 2 -0.1854019165039062 2 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 29.081581746732265 0.3152867722954398 4 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 8 -1 52.049 0.0 0.0 4.5876 0.0 0.0 244.14174212094264 0.0 244.14174212094264 0.0 24.74189577140811 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.7134679910804405 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 4.5876 - 321 + 1 2.122 61460.5 1.0 2510 4345 6855 HBL1_DMSO_200M_050219_2,6857 HBL1_DMSO_200M_050219_2,6857,EYVSSQLGRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6858 36.715 20.0 3288700.0 25 0 195860.0 + 2674 ATDPTIHTV 9 87 477.748403193477 953.482253453754 2 477.7490417361259 MULTI CID FTMS 0 0 0 6855 3061332.75 0.3163673474112007 -1 0.0537490844726562 3 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 112.59319219568356 0.0043923200227745 4 [TA]DPT{I|L}HTV 9 0 + 85.561 0.0 0.0 8.9736 8.9736 98.305 0.0 0.0 0.0 50.28537168208721 24.83841796451358 24.83841796451358 43.61600575786412 0 1.2302046884880935 2.0 1.8979400086720373 0.0 + + [TA]DPT{I|L}HTV;[DP]KKTPD[PG];[TA]{[ET]|[MV]}[VP]HTV;[TA][MT]T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV;[TA]{[ET]|[MV]}T[YV]AV;[TA]{[ET]|[MV]}T{I|L}[YR];[TA]{[DS]|[MA]|[CV]|TT}E{I|L}[YR];{[ES]|[DT]|[{I|L}C]}A[Y{I|L}]TTAV;[H{I|L}]TPTDTAV;[HT]{I|L}PTDTAV 8.9736;4.3992;3.9958;3.9745;3.1867;3.0316;2.8469;2.598;2.2823;2.2823 +;-;-;-;-;-;-;-;-;- + 581 + 1 2.122 56207.9 1.0 2511 4345 6855 HBL1_DMSO_200M_050219_2,6858 HBL1_DMSO_200M_050219_2,6858,ATDPTIHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6859 36.719 206.0 522300.0 25 0 63185.0 + -1 YQCSHPELMY 10 96 672.2738524100004 1342.5331518868006 2 672.2739135622978 MULTI CID FTMS 0 0 0 6855 458888.9375 0.8201971720031485 -1 0.0537490844726562 4 Carbamidomethyl (C),Oxidation (M) _YQC(Carbamidomethyl (C))SHPELM(Oxidation (M))Y_ REV__ENSG00000068912|ENST00000185150|ERLEC1;REV__nc|ENSG00000068912|Q96DZ1-2|ERLEC1;REV__nc|ENSG00000068912|Q96DZ1-3|ERLEC1 6.723162845929126 0.6955379296933136 4 [YQ]DQSPQNQ 9 -1 47.294 0.0 0.0 3.5228 0.0 0.0 0.0 251.11548243245733 251.11548243245733 14.573331911542674 0.0 0.0 0.0 0 0.5 1.154901959985743 0.5 0.9749073637206092 [YQ]DQSPQNQ 3.5228 - 2085 + 1 2.122 83186.2 1.0 2512 4345 6855 HBL1_DMSO_200M_050219_2,6859 HBL1_DMSO_200M_050219_2,6859,YQCSHPELMY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6860 36.723 217.0 470010.0 25 0 124480.0 + -1 CRGGGAGKV 9 59 431.22047840213776 0 430.8883849978447 PEAK CID FTMS 0 0 0 6855 52379.0625 0.3069007488365088 5 -0.4026222229003906 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))RGGGAGKV_ REV__ENST00000527038.6_2_11:118926784-118927823:-|nuORF 3.944395688203298 0.3444685223463734 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.122 85548.2 1.0 2513 4345 6855 HBL1_DMSO_200M_050219_2,6860 HBL1_DMSO_200M_050219_2,6860,CRGGGAGKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6861 36.729 334.0 497250.0 25 0 47537.0 + 16550 KAWNDIKKV 9 152 367.8855060271642 1100.6346886816923 3 367.8851501345634 MULTI CID FTMS 0 0 0 6855 224350.03125 0.3454654442694041 -1 0.0537490844726562 6 Unmodified _KAWNDIKKV_ ENSG00000174444|ENST00000307961|RPL4;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF 55.23464941255904 0.0288927259679799 4 KAWND{I|L}KVK 9 2 + 72.186 0.0 0.0 6.5586 6.5586 80.313 0.0 0.0 0.0 16.478174818886366 3.182503180159344 3.182503180159344 3.182503180159344 0 1.666386562212267 0.0 0.3807196863200844 0.7592893296996894 KAWND{I|L}KVK;KAWND{I|L}KKV;KAWGGD{I|L}KVK;KAWGGD{I|L}KKV;KAWND{I|L}VKK;KAWGGD{I|L}VKK;KAWNDV{I|L}KK;KAV{[QN]|[E{I|L}]|[KN]}[WE]VK;KAV{[QN]|[E{I|L}]|[KN]}{I|L}[WD]K;KAV{[QN]|[E{I|L}]|[KN]}[WE]KV 6.5586;6.2694;5.722;5.4328;5.3593;4.5226;4.4947;4.4094;4.1794;4.1203 -;+;-;-;-;-;-;-;-;- + 662 + 1 2.122 139250.8 1.0 2514 4345 6855 HBL1_DMSO_200M_050219_2,6861 HBL1_DMSO_200M_050219_2,6861,KAWNDIKKV True True KAWNDIKKV 36.728708 367.885150134563 7690520.5 6855.0 ENST00000566622.5_1_15:66794044-66797161:-|nuORF;;ENSG00000174444|ENST00000307961|RPL4;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF 3.1456621487935386 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6862 36.743 800.0 198940.0 25 0 21541.0 + 24100 LYIQRTKSM 9 151 380.5462167151525 1138.6168207456576 3 380.5463439822197 MULTI CID FTMS 0 0 0 6855 215791.34375 1.0 0 0.0 7 Unmodified _LYIQRTKSM_ ENSG00000100129|ENST00000652021|EIF3L;ENST00000457262.1_1_10:43062145-43062928:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L 38.61474834105838 0.0830609365873449 4 {I|L}Y{I|L}Q[K{I|L}][SG]SM 10 4 + 67.357 0.0 0.0 5.9156 5.9156 86.341 0.0 0.0 0.0 41.95046257204389 10.17606240177031 10.17606240177031 9.51667520279372 0 0.3252574989159953 2.0 0.5994850021680094 0.3494850021680094 {I|L}Y{I|L}Q[K{I|L}][SG]SM;{I|L}Y{I|L}Q[K{I|L}][KC]M;{I|L}Y{I|L}Q[K{I|L}][SG]MS;{I|L}Y{I|L}Q{[QN]|[E{I|L}]|[KN]}VVY;{I|L}Y{I|L}Q{[QN]|[E{I|L}]|[KN]}[{I|L}T]{M(Oxidation (M))|F};{I|L}Y{I|L}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{M(Oxidation (M))|F}P;{I|L}Y{I|L}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VM{I|L};{I|L}Y{I|L}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KQ]S;{I|L}Y{[QG]|[NA]}{M(Oxidation (M))|F}SRR{I|L};[YV]SY{I|L}{[TV]|[{I|L}S]}VVP 5.9156;5.0798;4.909;4.4177;4.325;4.0587;3.8319;3.6755;3.0293;0.22598 -;-;-;-;-;-;-;-;-;- 295 + 1 2.122 127161.4 0.7400000095367432 2515 4345 6855 HBL1_DMSO_200M_050219_2,6862 HBL1_DMSO_200M_050219_2,6862,LYIQRTKSM True True LYIQRTKSM 36.742527 380.54634398222 1139159.875 6855.0 ENST00000457262.1_1_10:43062145-43062928:+|nuORF;;nc|ENSG00000100129|Q9Y262-2|EIF3L;;ENST00000495197.1_1_10:38368986-38369799:-|nuORF;;ENSG00000100129|ENST00000652021|EIF3L 2.4130709966023765 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6863 36.749 331.0 288810.0 25 0 21893.0 + 23744 LTWMIEASI 9 123 532.2794432193501 1062.5443335055002 2 532.2798950076103 MULTI CID FTMS 0 0 0 6855 220908.671875 0.8889167977843341 -1 0.0537490844726562 8 Unmodified _LTWMIEASI_ REV__ENSG00000137766|ENST00000260323|UNC13C;REV__ENST00000561210.1_1_15:54556427-54709226:+|nuORF 21.74664581756881 0.2544899275067181 4 [VP]TS{M(Oxidation (M))|F} 5 -1 26.942 0.0 0.0 2.5356 0.0 0.0 0.0 528.2738006288001 528.2738006288001 10.064987362915833 0.0 0.0 0.0 0 0.5 0.9208187539523752 0.6747425010840047 0.0 [VP]TS{M(Oxidation (M))|F} 2.5356 - 1125 1 2.122 77726.9 1.0 2516 4345 6855 HBL1_DMSO_200M_050219_2,6863 HBL1_DMSO_200M_050219_2,6863,LTWMIEASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6864 36.762 800.0 355300.0 25 0 58579.0 + 2568 ASGPRSLVP 9 186 442.2534332610532 882.4923135889063 2 442.2532836794853 MULTI CID FTMS 0 0 0 6855 147773.9375 0.5219390825338113 1 -0.1210556030273437 9 Unmodified _ASGPRSLVP_ REV__ENST00000464728.5_1_16:841212-841371:+|nuORF 12.240655878213236 0.5053430591993562 4 AGSPP 5 -1 26.516 0.0 0.0 3.0046 0.0 0.0 0.0 470.27404750488654 470.27404750488654 14.29719989586374 0.0 0.0 0.0 0 0.4419628234359579 0.638272163982407 0.0 0.0 AGSPP 3.0046 - 322 + 1 2.122 219835.2 0.6200000047683716 2517 4345 6855 HBL1_DMSO_200M_050219_2,6864 HBL1_DMSO_200M_050219_2,6864,ASGPRSLVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6865 36.771 486.0 274210.0 25 0 38083.0 + 26294 NQVNDLTTA 9 145 488.2403316040412 974.4661102748825 2 488.2401611208916 MULTI CID FTMS 0 0 0 6855 145876.15625 1.0 0 0.0 10 Unmodified _NQVNDLTTA_ ENSG00000128944|ENST00000249776|KNSTRN;ENST00000416151.6_1_15:40685627-40685795:+|nuORF;ENST00000560220.5_1_15:40676698-40685795:+|nuORF 39.957323273325 0.0756908302845263 4 {[QN]|[E{I|L}]|[KN]}VDN{M(Oxidation (M))|F}W 7 5 37.515 0.0 0.0 3.8498 0.0 0.0 0.0 68.0519031786155 68.0519031786155 13.198082157920863 0.0 0.0 0.0 0 0.3807196863200844 0.4089353929735008 0.341129063296272 0.8996498648046138 {[QN]|[E{I|L}]|[KN]}VDN{M(Oxidation (M))|F}W 3.8498 - 1512 1 2.122 103454.0 1.0 2518 4345 6855 HBL1_DMSO_200M_050219_2,6865 HBL1_DMSO_200M_050219_2,6865,NQVNDLTTA True True NQVNDLTTA 36.770944 488.240161120892 1060205.5 6855.0 ENST00000416151.6_1_15:40685627-40685795:+|nuORF;;ENSG00000128944|ENST00000249776|KNSTRN;;ENST00000560220.5_1_15:40676698-40685795:+|nuORF 4.226718902587891 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6866 36.786 800.0 259580.0 25 0 22168.0 + 40936 LPNSTERAI 9 165 500.27723412962 998.53991532604 2 500.7744323611259 MULTI CID FTMS 0 0 0 6855 123086.5234375 0.2414041382984317 -8 0.3483314514160156 11 Unmodified _VLTGLQSGQP_ nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENST00000547987.2_1_12:53854819-53861193:+|nuORF;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000197111|Q15366-7|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 8.745405648335112 0.6861838735306406 4 [{I|L}V]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TSNP 8 6 35.143 0.0 0.0 3.5194 0.0 0.0 0.0 109.06519133528028 109.06519133528028 12.791681396005998 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.0 0.8494850021680094 [{I|L}V]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TSNP 3.5194 - 547 1 2.122 156759.3 0.6000000238418579 2519 4345 6855 HBL1_DMSO_200M_050219_2,6866 HBL1_DMSO_200M_050219_2,6866,VLTGLQSGQP False False LPNSTERAI 36.785933 500.774432361126 3537729.75 6855.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;ENST00000547987.2_1_12:53854819-53861193:+|nuORF;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000197111|Q15366-7|PCBP2;;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 3.5292558670043945 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6867 36.797 622.0 376730.0 25 0 66302.0 + 45813 YYNSSERAL 9 156 551.7620014817068 1101.5094500302134 2 551.7620117068291 MULTI CID FTMS 0 0 0 6855 110262.984375 0.2008742180178212 -2 0.1687583923339843 12 Unmodified _YYNSSERAL_ ENSG00000154370|ENST00000284551|TRIM11;nc|ENSG00000154370|Q96F44-3|TRIM11 69.10491478415734 0.0214449631113747 4 YYNSSERA{I|L} 9 0 + 92.13 0.0 0.0 8.364 8.364 92.462 0.0 0.0 0.0 61.89184421230178 6.379910789384425 6.379910789384425 9.208187539523747 0 0.805462187404089 2.0 0.6549471895720985 1.1237125054200234 + + YYNSSERA{I|L};YYGGSSERA{I|L};YYNKT[VP]SM;YYNKT{NN|[MP]|[D{I|L}]|[EV]}W;YYNS[Q{I|L}]MA{I|L};YYNKT[WD]{I|L};YYNK{[VA]|[{I|L}G]}[DV]M;YYGGKT[VP]SM;YYNK[WE]S{I|L};YYGGKT{NN|[MP]|[D{I|L}]|[EV]}W 8.364;7.5281;6.326;6.1026;5.9796;5.8021;5.5797;5.49;5.4611;5.2618 +;-;-;-;-;-;-;-;-;- + 2220 + 1 2.122 176072.4 1.0 2520 4345 6855 HBL1_DMSO_200M_050219_2,6867 HBL1_DMSO_200M_050219_2,6867,YYNSSERAL True True YYNSSERAL 36.796791 551.762011706829 3788613.0 6855.0 nc|ENSG00000154370|Q96F44-3|TRIM11;;ENSG00000154370|ENST00000284551|TRIM11 5.586408774058024 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6868 36.811 800.0 107850.0 25 0 7664.2 -1 DVSNVQIMCA 10 132 548.2421142458916 0 548.2421142458916 PEAK CID FTMS 0 0 0 -1 0 13 Oxidation (M) _DVSNVQIM(Oxidation (M))CA_ ENSG00000112320|ENST00000317357|SOBP;ENST00000477448.1_1_6:107811820-107879187:+|nuORF 6.2057823575117 0.3961065659209838 4 {I|L}PY 3 -1 13.188 0.0 0.0 1.2049 0.0 0.0 79.95163669789436 638.3081373807173 718.2597740786117 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}PY 1.2049 - 84 + 1 2.122 71751.6 0.5400000214576721 2521 4345 6855 HBL1_DMSO_200M_050219_2,6868 HBL1_DMSO_200M_050219_2,6868,DVSNVQIMCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6869 36.826 800.0 83591.0 25 0 3317.6 + 38492 TSFLEDSGRKT 11 116 620.8148839373725 0 620.8158447146416 PEAK CID FTMS 0 0 0 6855 95448.1484375 0.8074893419134265 -2 0.1687583923339843 14 Unmodified _TSFLEDSGRKT_ REV__ENSG00000011304|ENST00000356948|PTBP1;REV__ENST00000586944.5_1_19:797434-805231:+|nuORF;REV__ENST00000590887.5_1_19:797434-804304:+|nuORF;REV__nc|ENSG00000011304|P26599-1|PTBP1;REV__nc|ENSG00000011304|P26599-2|PTBP1 13.042465956692816 0.4221659143281722 4 RPPT 4 -1 17.779 0.0 0.0 1.4343 0.0 0.0 396.1880431659575 389.1764925592407 785.3645357251982 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 RPPT 1.4343 - 242 + 1 2.122 56476.6 0.5299999713897705 2522 4345 6855 HBL1_DMSO_200M_050219_2,6869 HBL1_DMSO_200M_050219_2,6869,TSFLEDSGRKT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6871 36.83 13.0 3046900.0 25 0 360740.0 -1 QYRSMDSSM 9 71 560.721765324615 1119.42897771603 2 560.7219116091728 MULTI CID FTMS 0 0 0 6870 5898478.5 1.0 0 0.0 1 Oxidation (M) _QYRSM(Oxidation (M))DSSM_ ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1 12.531546534597751 0.4974689918368763 4 [YG]GQMGG 7 -1 37.413 0.0 0.0 3.3421 0.0 0.0 0.0 466.16033692917375 466.16033692917375 11.935297428629568 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YG]GQMGG 3.3421 - 538 1 2.097 34840.6 1.0 2523 4346 6870 HBL1_DMSO_200M_050219_2,6871 HBL1_DMSO_200M_050219_2,6871,QYRSMDSSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6872 36.831 61.0 703370.0 25 0 94344.0 + -1 MYPYITLI 8 70 515.2675900228874 1028.5206271125746 2 515.2679321169853 MULTI CID FTMS 0 0 0 6870 527793.3125 0.0739694736111119 3 -0.2723503112792969 2 Oxidation (M) _M(Oxidation (M))YPYITLI_ REV__ENSG00000165164|ENST00000378653|CFAP47;REV__nc|ENSG00000165164|Q6ZTR5-6|CFAP47 10.183394434864962 0.7604730176254005 4 [VS]Y{M(Oxidation (M))|F}A 5 -1 45.713 0.0 0.0 4.4446 0.0 0.0 0.0 458.262553447844 458.262553447844 31.7288529850385 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [VS]Y{M(Oxidation (M))|F}A 4.4446 - 112 + 1 2.097 39482.7 1.0 2524 4346 6870 HBL1_DMSO_200M_050219_2,6872 HBL1_DMSO_200M_050219_2,6872,MYPYITLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6873 36.832 33.0 1497800.0 25 0 85267.0 + 26604 NVPWTRTI 8 87 493.7726739544863 985.5307949757728 2 493.7725707888603 MULTI CID FTMS 0 0 0 6870 2466828.75 0.0792258016300001 -3 0.2898139953613281 3 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 32.30548876998284 0.3644845974844379 4 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L} 9 -1 + 45.155 0.0 0.0 4.5818 4.5818 77.688 0.0 0.0 0.0 4.137342758552691 21.994784489444967 4.137342758552691 7.781512503836431 0 0.8494850021680094 0.0 0.0 0.3807196863200844 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L};{[NV]|[RG]}R[NG]VNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GGGT{I|L};{[NV]|[RG]}R[NG]VGGT{I|L};[PA]AT[W{I|L}]NT{I|L};[PG][VS][W{I|L}]NT{I|L};{[NV]|[RG]}R[NP]HH{I|L};[PA]AT[W{I|L}]GGT{I|L};{[NV]|[RG]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}N[VP] 4.5818;3.7923;3.6475;2.8579;1.5003;1.2121;1.026;0.1796;0.0097777 -;-;-;-;-;-;-;-;- 235 1 2.097 43783.1 1.0 2525 4346 6870 HBL1_DMSO_200M_050219_2,6873 HBL1_DMSO_200M_050219_2,6873,NVPWTRTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6874 36.835 103.0 807490.0 25 0 110020.0 22469 LPVHKSLG 8 65 425.7610386944438 849.5075244556876 2 425.7608520388603 MULTI CID FTMS 0 0 0 6870 827404.625 0.7978293406632812 -1 0.1210556030273437 4 Unmodified _LPVHKSLG_ ENSG00000103091|ENST00000262144|WDR59;ENST00000563381.5_1_16:74923599-74938045:-|nuORF;nc|ENSG00000103091|Q6PJI9-3|WDR59;nc|ENSG00000103091|Q6PJI9-4|WDR59 21.74664581756881 0.5868176546531598 4 {I|L}PPP 4 6 53.175 0.0 0.0 6.2595 0.0 0.0 0.0 442.24424158267817 442.24424158267817 46.18562527100117 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPP 6.2595 - 23 + 1 2.097 70976.0 1.0 2526 4346 6870 HBL1_DMSO_200M_050219_2,6874 HBL1_DMSO_200M_050219_2,6874,LPVHKSLG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6875 36.84 286.0 240970.0 25 0 20480.0 -1 QYRSMDSSM 9 113 568.7190607126762 1135.4235684921523 2 568.7191039919853 MULTI CID FTMS 0 0 0 6870 454579.375 1.0 0 0.0 5 2 Oxidation (M) _QYRSM(Oxidation (M))DSSM(Oxidation (M))_ ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-2|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37|BLTP1 12.531546534597751 0.4974689918368763 4 SS{M(Oxidation (M))|F} 3 -1 32.14 0.0 0.0 2.8306 0.0 0.0 796.3137490114867 0.0 796.3137490114867 0.0 -0.4210361666002313 -0.4210361666002313 0.0 0 0.0 0.0 0.5941876774005248 0.0 SS{M(Oxidation (M))|F} 2.8306 + + 1584 + 1 2.097 61941.1 1.0 2527 4346 6870 HBL1_DMSO_200M_050219_2,6875 HBL1_DMSO_200M_050219_2,6875,QYRSMDSSM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6876 36.844 244.0 635290.0 25 0 68198.0 -1 0 147 336.1121268005461 670.2097006678922 2 336.1117126345634 MULTI CID FTMS 0 0 0 6870 396669.6875 1.0 0 0.0 6 4 P{M(Oxidation (M))|F} 2 -1 19.508 0.0 0.0 2.9108 0.0 0.0 408.0772205702756 0.0 408.0772205702756 0.0 1.549471895720984 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 P{M(Oxidation (M))|F} 2.9108 - 85 + 1 2.097 126054.6 1.0 2528 4346 6870 HBL1_DMSO_200M_050219_2,6876 HBL1_DMSO_200M_050219_2,6876, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6877 36.847 112.0 743370.0 25 0 58777.0 + 30384 RAMEVRGMEA 10 119 383.8551427538429 0 383.8552123904228 PEAK CID FTMS 0 0 0 6870 320924.125 1.0 0 0.0 7 Unmodified _RAMEVRGMEA_ ENSG00000101811|ENST00000372972|CSTF2;nc|ENSG00000101811|P33240-2|CSTF2 8.28643447893445 0.3878129062711051 4 K 1 10 5.4846 0.0 0.0 0.71628 0.0 0.0 70.27222290827338 564.3056713997909 634.5778943080643 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.71628 - 20 + 1 2.097 70997.2 1.0 2529 4346 6870 HBL1_DMSO_200M_050219_2,6877 HBL1_DMSO_200M_050219_2,6877,RAMEVRGMEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6878 36.854 378.0 356400.0 25 0 90439.0 + 30385 RAMEVRGMEA 10 108 575.2797034950029 0 575.2795287966728 PEAK CID FTMS 0 0 0 6870 246182.46875 1.0 0 0.0 8 Unmodified _RAMEVRGMEA_ ENSG00000101811|ENST00000372972|CSTF2;nc|ENSG00000101811|P33240-2|CSTF2 18.3397198061782 0.3115488877625628 4 PAME 4 7 17.032 0.0 0.0 1.4829 0.0 0.0 59.04937856831345 658.2977999322874 717.3471785006009 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 PAME 1.4829 - 84 + 1 2.097 110881.0 1.0 2530 4346 6870 HBL1_DMSO_200M_050219_2,6878 HBL1_DMSO_200M_050219_2,6878,RAMEVRGMEA False True RAMEVRGMEA 36.853624 575.279528796673 1567595.25 6870.0 ENSG00000101811|ENST00000372972|CSTF2;;nc|ENSG00000101811|P33240-2|CSTF2 6.5590583483378095 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6879 36.86 364.0 356450.0 25 0 28364.0 + -1 VEEMQRIQ 8 152 524.7563100308038 1047.4980671284077 2 524.7569457888603 MULTI CID FTMS 0 0 0 6870 216972.125 0.6968069016832096 -1 0.1210556030273437 9 Oxidation (M) _VEEM(Oxidation (M))QRIQ_ REV__ENSG00000090989|ENST00000381295|EXOC1;REV__ENST00000511971.5_1_4:56749994-56766742:+|nuORF;REV__nc|ENSG00000090989|Q9NV70-2|EXOC1 46.020951573049366 0.1579632664462935 4 DPYEQAARV 9 -1 + 106.96 0.0 0.0 10.211 10.211 91.735 0.0 0.0 0.0 29.546284272644044 7.543003491326772 7.543003491326772 7.543003491326772 0 2.336696871556164 1.6989700043360187 0.4247425010840047 1.2416440611282626 DPYEQAARV;DPYEQAAVR;DPYE[AG]AARV;DPYE[AG]AAVR;DPYEQ[R{I|L}]Q;DPYEV[NG]RV;DPYEQ[Q{I|L}]R;DPYE[RN]RV;DPYE[AG][R{I|L}]Q;DPYEQVAAR 10.211;9.491;9.332;8.6119;8.5707;8.155;7.843;7.824;7.6865;7.6547 -;-;-;-;-;-;-;-;-;- 2165 + 1 2.097 101535.2 1.0 2531 4346 6870 HBL1_DMSO_200M_050219_2,6879 HBL1_DMSO_200M_050219_2,6879,VEEMQRIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6880 36.864 199.0 377470.0 25 0 56260.0 + 2105 APSPPPLGP 9 94 416.732095785175 831.44963863715 2 416.7333557009697 MULTI CID FTMS 0 0 0 6870 214432.96875 0.7636362361620003 -1 0.1210556030273437 10 Unmodified _APSPPPLGP_ REV__ENST00000351266.8_1_9:34551759-34552056:-|nuORF 53.57557251787612 0.0325303259649373 4 [PA]SPPP 6 -1 38.893 0.0 0.0 4.6777 0.0 0.0 0.0 282.1455539224548 282.1455539224548 18.434947104849044 0.0 0.0 0.0 0 0.8252574989159953 0.7958800173440752 0.903598431600422 0.0 [PA]SPPP 4.6777 + + 245 1 2.097 63085.7 1.0 2532 4346 6870 HBL1_DMSO_200M_050219_2,6880 HBL1_DMSO_200M_050219_2,6880,APSPPPLGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6881 36.878 800.0 127930.0 25 0 9091.1 + 11569 GKCRLQLEQG 10 138 566.298398399151 1130.582243865102 2 566.2987548708916 MULTI CID FTMS 0 0 0 6870 148187.75 0.7456713161233774 -1 0.1210556030273437 11 Unmodified _GKCRLQLEQG_ REV__ENSG00000147255|ENST00000361420|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-4|IGSF1 24.020572477871973 0.4289996903560794 4 [AG]NSS 5 -1 21.749 0.0 0.0 1.9237 0.0 0.0 0.0 711.3929182637925 711.3929182637925 5.622352066686517 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.7134679910804405 0.0 [AG]NSS 1.9237 - 515 1 2.097 80603.1 0.7599999904632568 2533 4346 6870 HBL1_DMSO_200M_050219_2,6881 HBL1_DMSO_200M_050219_2,6881,GKCRLQLEQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6882 36.89 698.0 391740.0 25 0 30797.0 + 43160 VYQPKRSVL 9 182 363.8854451498512 1088.6345060497536 3 363.8852722048759 MULTI CID FTMS 0 0 0 6870 136784.59375 0.3372929026353899 -2 0.1748046875 12 Unmodified _VYQPKRSVL_ ENSG00000119812|ENST00000238823|FAM98A;ENST00000474985.5_1_2:33809845-33813599:-|nuORF 39.94969957227396 0.0757326808254658 4 VYQPK 5 4 44.797 0.0 0.0 4.115 0.0 0.0 0.0 470.2722567193969 470.2722567193969 30.94042183487777 0.0 0.0 0.0 0 0.378569643379605 1.3979400086720375 0.0 0.7134679910804405 + VYQPK 4.115 + + 409 + 1 2.097 227037.1 1.0 2534 4346 6870 HBL1_DMSO_200M_050219_2,6882 HBL1_DMSO_200M_050219_2,6882,VYQPKRSVL True True VYQPKRSVL 36.889953 363.885272204876 6536899.0 6870.0 ENST00000474985.5_1_2:33809845-33813599:-|nuORF;;ENSG00000119812|ENST00000238823|FAM98A 1.215403546889623 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6884 36.906 800.0 239790.0 25 0 22972.0 + -1 RMLPHAPGV 9 166 497.2694863541056 992.5244197750112 2 497.2692748904228 MULTI CID FTMS 0 0 0 6883 72941.890625 0.2608518277583057 -1 0.0643463134765625 1 Oxidation (M) _RM(Oxidation (M))LPHAPGV_ ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;ENSG00000116478|ENST00000373548|HDAC1 28.486842064014134 0.1687311288560894 4 [PA][YR]YAPGV 9 -1 + 28.678 0.0 0.0 2.8894 2.8894 63.789 0.0 0.0 0.0 0.4028488911117698 14.249689886318674 0.4028488911117698 1.5402957901185594 0 1.3783333568435268 0.744727494896694 0.0 0.2887254899964357 [PA][YR]YAPGV;[KG][KC]AYAPGV;[PG]A[YV]YAPR;[RH]{[HG]|PP}YAPGV;[PG]G[Y{I|L}]YAPR;[PA]G[YV]YAPR;[TA][HD]{I|L}{I|L}APR;[{M(Oxidation (M))|F}V][Q{I|L}]YAPGV;{[TV]|[{I|L}S]}{[WT]|[RM]}YAPGV;[QP][YV]YAPR 2.8894;2.7342;2.7174;2.4424;2.1294;1.957;1.8789;1.8008;1.6355;1.6289 -;-;-;-;-;-;-;-;-;- 530 1 2.097 146865.1 0.6800000071525574 2535 4347 6883 HBL1_DMSO_200M_050219_2,6884 HBL1_DMSO_200M_050219_2,6884,RMLPHAPGV False False RMLPHAPGV 36.905695 497.269274890423 2417408.0 6883.0 ENSG00000196591|ENST00000519065|HDAC2;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 4.952550490697225 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6885 36.907 64.0 1434700.0 25 0 174600.0 + 6384 DWAKLIKRL 9 91 381.5741944535738 1141.7007539609217 3 381.5739929080009 MULTI CID FTMS 0 0 0 6883 880746.5625 0.0427160854297883 -5 0.3596115112304687 2 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 4.5288652416199255 0.7565837746943351 4 {M(Oxidation (M))|F}PQK{I|L}KR{I|L}{I|L} 9 -1 + 51.112 0.0 0.0 4.4768 4.4768 79.417 0.0 0.0 0.0 38.01283868714784 9.375802710242064 9.375802710242064 9.208187539523747 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}PQK{I|L}KR{I|L}{I|L};{M(Oxidation (M))|F}P[AG]K{I|L}KR{I|L}{I|L};[PG]A{M(Oxidation (M))|F}K{I|L}KR{I|L}{I|L} 4.4768;3.6703;2.4161 -;-;- 88 + 1 2.097 75204.0 1.0 2536 4347 6883 HBL1_DMSO_200M_050219_2,6885 HBL1_DMSO_200M_050219_2,6885,DWAKLIKRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6886 36.909 71.0 871330.0 25 0 80832.0 + 32285 RWPKKSAEF 9 97 383.5453438582354 1147.6142021749065 3 383.5451232790947 MULTI CID FTMS 0 0 0 6883 555117.625 0.2742772565486804 -15 0.7516441345214844 3 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 17.11289562659939 0.3734572693229295 4 [WR]PKK{M(Oxidation (M))|F}{[SA]|[TG]}E 9 2 + 42.787 0.0 0.0 3.7284 3.7284 66.407 0.0 0.0 0.0 17.216036960495558 22.0860622346639 17.216036960495558 1.7609125905568137 0 0.0 1.0457574905606752 0.4247425010840047 0.0 [WR]PKK{M(Oxidation (M))|F}{[SA]|[TG]}E;[WR]PKK{[SA]|[TG]}E{M(Oxidation (M))|F};[WR]PKK{[WT]|[RM]}{M(Oxidation (M))|F};[WR]PKK{[SA]|[TG]}{M(Oxidation (M))|F}E;[KP][WR]K{M(Oxidation (M))|F}{[SA]|[TG]}E;[KP][WR]K{[SA]|[TG]}E{M(Oxidation (M))|F};[KP][WR]K{[WT]|[RM]}{M(Oxidation (M))|F};[KP][WR]K{[SA]|[TG]}{M(Oxidation (M))|F}E;[KP]{[QD]|[EN]|[WG]|[KD]|[RS]}VK{[WT]|[RM]}{M(Oxidation (M))|F};[KP]{[QD]|[EN]|[WG]|[KD]|[RS]}VK{M(Oxidation (M))|F}WT 3.7284;3.5749;3.4262;3.3126;1.3872;1.2338;1.085;0.97146;0.86259;0.81911 -;+;-;-;-;-;-;-;-;- + 173 1 2.097 56344.1 1.0 2537 4347 6883 HBL1_DMSO_200M_050219_2,6886 HBL1_DMSO_200M_050219_2,6886,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6887 36.923 793.0 590820.0 25 0 25715.0 3484 CILDFMCMS 9 215 531.711666892254 1061.408780851308 2 531.7103149294853 MULTI CID FTMS 0 0 0 6883 239290.6875 0.2656181805126433 -1 0.0643463134765625 4 Unmodified _CILDFMCMS_ ENST00000579991.2_1_17:56166640-56166793:+|nuORF 14.838274106304384 0.4350285940865338 4 [YV]{[QN]|[E{I|L}]|[KN]}SMCMS 9 4 + 28.361 0.0 0.0 2.672 2.672 61.016 0.0 0.0 0.0 0.204982592156476 -1.2275201008647088 -1.2275201008647088 0.2876324552321065 0 0.4337955442476159 1.5228787452803376 0.5994850021680094 0.0 [YV]{[QN]|[E{I|L}]|[KN]}SMCMS;[DP]VT[Y{M(Oxidation (M))|F}]CMS;[PS]{I|L}D[Y{M(Oxidation (M))|F}]CMS;[PS]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MCMS;[DP]S{I|L}[Y{M(Oxidation (M))|F}]CMS;[YV]{[QS]|[NT]}NMCMS;[PS]D{I|L}[Y{M(Oxidation (M))|F}]CMS;[DP][HK]NMCMS;[PS]VE[Y{M(Oxidation (M))|F}]CMS;[VP]DT[Y{M(Oxidation (M))|F}]CMS 2.672;2.6449;2.4438;2.4144;2.1954;2.0566;2.0521;2.0001;1.8862;1.7732 -;-;-;-;-;-;-;-;-;- 5758 1 2.097 352178.6 1.0 2538 4347 6883 HBL1_DMSO_200M_050219_2,6887 HBL1_DMSO_200M_050219_2,6887,CILDFMCMS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6888 36.936 800.0 239850.0 25 0 26663.0 -1 PPSSICTSL 9 159 481.2375798238176 0 481.2375976443291 PEAK CID FTMS 0 0 0 6883 202145.578125 1.0 0 0.0 5 Carbamidomethyl (C) _PPSSIC(Carbamidomethyl (C))TSL_ ENST00000506396.1_1_5:31249548-31249821:+|nuORF 21.74664581756881 0.185237546287679 4 T 1 -1 11.237 0.0 0.0 1.17 0.0 0.0 113.0841145272238 743.3057371876023 856.3898517148261 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T 1.17 + + 38 + 1 2.097 149407.6 0.8799999952316284 2539 4347 6883 HBL1_DMSO_200M_050219_2,6888 HBL1_DMSO_200M_050219_2,6888,PPSSICTSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6889 36.944 406.0 323160.0 25 0 37036.0 + 24401 MFPERVRSA 9 112 364.8592125722053 1091.5558083168155 3 364.8589660525322 MULTI CID FTMS 0 0 0 6883 188420.078125 0.6204918207397008 -7 0.4523735046386719 6 Unmodified _MFPERVRSA_ ENSG00000100216|ENST00000216034|TOMM22;ENST00000492561.1_1_22:39078186-39079843:+|nuORF 21.53697664764585 0.2571576504437394 4 M{M(Oxidation (M))|F}[EP]R 5 4 30.005 0.0 0.0 2.7488 0.0 0.0 0.0 428.2277926080688 428.2277926080688 19.035984316004217 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.805462187404089 + M{M(Oxidation (M))|F}[EP]R 2.7488 + + 102 + 1 2.097 113345.5 1.0 2540 4347 6883 HBL1_DMSO_200M_050219_2,6889 HBL1_DMSO_200M_050219_2,6889,MFPERVRSA False True MFPERVRSA 36.943672 364.858966052532 13470342.0 6883.0 ENSG00000100216|ENST00000216034|TOMM22;;ENST00000492561.1_1_22:39078186-39079843:+|nuORF 4.491567929585774 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6890 36.957 800.0 254530.0 25 0 13500.0 + 26169 NQDDLTHKL 9 198 361.8522426526724 0 361.8519470095634 PEAK CID FTMS 0 0 0 6883 159035.421875 0.8531316057186984 -1 0.0643463134765625 7 Unmodified _NQDDLTHKL_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928-2|POLR2A;nc|ENSG00000181222|P24928|POLR2A 34.93206674587334 0.0866320009191956 4 DTHK 4 5 16.919 0.0 0.0 2.3444 0.0 0.0 109.36597104577612 128.07216821842033 237.43813926419648 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6382104921644451 0.1694451763165201 DTHK 2.3444 - 35 + 1 2.097 163756.7 0.6700000166893005 2541 4347 6883 HBL1_DMSO_200M_050219_2,6890 HBL1_DMSO_200M_050219_2,6890,NQDDLTHKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6891 36.971 800.0 272010.0 25 0 30989.0 -1 0 75 1108.3101034509257 6643.8169619059545 6 1108.976123034954 MULTI CID FTMS 0 0 0 6883 139950.40625 0.6174178638029832 3 -0.2172203063964843 8 4 V 1 -1 5.4846 0.0 0.0 0.082551 0.0 0.0 4452.888103605637 2088.7918184869745 6541.679922092611 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.082551 - 8 + 1 2.097 140490.4 0.6200000047683716 2542 4347 6883 HBL1_DMSO_200M_050219_2,6891 HBL1_DMSO_200M_050219_2,6891, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6892 36.987 800.0 157080.0 25 0 5507.3 + 26170 NQDDLTHKL 9 161 542.2753046283797 0 542.2759887576103 PEAK CID FTMS 0 0 0 6883 96462.5703125 0.6251915366691643 1 -0.0966758728027343 9 Unmodified _NQDDLTHKL_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928-2|POLR2A;nc|ENSG00000181222|P24928|POLR2A 49.55428908609986 0.0328875595922215 4 DD{I|L}TH 5 4 25.821 0.0 0.0 2.3852 0.0 0.0 242.09890392607696 256.1670321100219 498.2659360360989 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.5994850021680094 0.0 + DD{I|L}TH 2.3852 + + 125 + 1 2.097 100553.9 0.6499999761581421 2543 4347 6883 HBL1_DMSO_200M_050219_2,6892 HBL1_DMSO_200M_050219_2,6892,NQDDLTHKL True True NQDDLTHKL 36.986651 542.27598875761 3392032.375 6883.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A;;nc|ENSG00000181222|P24928-2|POLR2A 6.290085951487224 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6894 36.991 2.4 22163000.0 25 0 4286500.0 + 43013 VVYGGKSTI 9 69 462.26348275175 922.5124125703 2 462.2635986208916 MULTI CID FTMS 0 0 0 6893 27369410.0 0.9347419906219144 1 -0.111328125 1 Unmodified _VVYGIPYL_ ENST00000466404.5_1_19:54631532-54634860:+|nuORF;ENSG00000105618|ENST00000321030|PRPF31 24.20995872069341 0.5349487244130675 4 VVYRYGGG 8 5 52.841 0.0 0.0 5.728 0.0 0.0 0.0 68.05142389468983 68.05142389468983 38.3771376077312 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VVYRYGGG 5.728 - 204 + 1 2.073 46567.9 1.0 2544 4348 6893 HBL1_DMSO_200M_050219_2,6894 HBL1_DMSO_200M_050219_2,6894,VVYGIPYL False False VVYGGKSTI 36.990798 462.263598620892 591947520.0 6893.0 ENST00000466404.5_1_19:54631532-54634860:+|nuORF;;ENSG00000105618|ENST00000321030|PRPF31 4.288942575454712 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6895 36.992 12.0 3775600.0 25 0 214070.0 + 2675 ATDPTIHTV 9 79 477.748403193477 953.482253453754 2 477.7483398318291 MULTI CID FTMS 0 0 0 6893 5115369.0 0.5286376404392781 2 -0.12054443359375 2 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 64.23631603340823 0.0237365939569086 4 [TA]D 3 6 34.666 0.0 0.0 3.6357 0.0 0.0 0.0 663.3470050008822 663.3470050008822 4.96839269034524 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.0 0.0 + [TA]D 3.6357 + + 197 1 2.073 41086.3 1.0 2545 4348 6893 HBL1_DMSO_200M_050219_2,6895 HBL1_DMSO_200M_050219_2,6895,ATDPTIHTV True True ATDPTIHTV 36.991977 477.748339831829 123665888.0 6893.0 nc|ENSG00000086848|Q9H6U8|ALG9;;ENSG00000086848|ENST00000616540|ALG9;;nc|ENSG00000086848|Q9H6U8-2|ALG9;;nc|ENSG00000086848|Q9H6U8-4|ALG9 9.54786173502604 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6896 36.993 22.0 2454900.0 25 0 306010.0 + 26916 PDPRSFTV 8 74 459.7377035282235 917.460854123247 2 459.7378723025322 MULTI CID FTMS 0 0 0 6893 1981695.75 0.2018194391939344 40 -1.9592971801757808 3 Unmodified _PDPRSFTV_ REV__ENSG00000181143|ENST00000397910|MUC16 21.74664581756881 0.5868176546531598 4 [DP]P 3 -1 38.997 0.0 0.0 4.2505 0.0 0.0 0.0 605.304823199672 605.304823199672 25.184465535402296 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 [DP]P 4.2505 + + 117 1 2.073 49987.6 1.0 2546 4348 6893 HBL1_DMSO_200M_050219_2,6896 HBL1_DMSO_200M_050219_2,6896,PDPRSFTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6897 36.995 51.0 1122500.0 25 0 160950.0 -1 VLFVEDGKME 10 70 591.7898531957247 1181.5651534582494 2 591.7899047732353 MULTI CID FTMS 0 0 0 6893 1540844.125 1.0 0 0.0 4 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 28.49450938151212 0.328477364964909 4 G[K{I|L}]GK[{M(Oxidation (M))|F}E] 7 -1 34.041 0.0 0.0 2.881 0.0 0.0 404.1674366681656 0.0 404.1674366681656 0.0 29.43652269646357 0.0 0.0 0 1.274227503252014 0.0 0.0 0.3807196863200844 G[K{I|L}]GK[{M(Oxidation (M))|F}E] 2.881 - 61 1 2.073 48060.5 1.0 2547 4348 6893 HBL1_DMSO_200M_050219_2,6897 HBL1_DMSO_200M_050219_2,6897,VLFVEDGKME False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6898 36.996 65.0 781930.0 25 0 208010.0 + 38167 TPPTAQVV 8 66 406.7294079739102 811.4442630146204 2 406.7291747927666 MULTI CID FTMS 0 0 0 6893 1194768.375 0.6918054237058486 2 -0.12054443359375 5 Unmodified _TPPTAQVV_ ENSG00000116489|ENST00000263168|CAPZA1;ENST00000466066.1_1_1:113202257-113212751:+|nuORF 63.562846038646086 0.116059504757595 4 [TP]PTAQVV 8 0 + 55.64 0.0 0.0 6.8569 6.8569 79.248 0.0 0.0 0.0 19.3931053707896 40.15539695625556 19.3931053707896 2.085521743960328 0 0.8182503180159344 1.5228787452803376 1.4604093769761874 0.0 + + [TP]PTAQVV;[TP]PATQVV;[TP]PAQTVV;[TP]PTA[AG]VV;[TP]PAT[AG]VV;[TP]PA[AG]TVV;[TP][QA]PTVV;[TP]PAQVTV;{[VA]|[{I|L}G]}[EP]AQVV;[TP]PA[AG]VTV 6.8569;6.5999;5.7982;5.7155;5.4585;4.6568;4.1312;4.0706;2.9422;2.9292 +;-;-;-;-;-;-;-;-;- + 198 1 2.073 46512.4 1.0 2548 4348 6893 HBL1_DMSO_200M_050219_2,6898 HBL1_DMSO_200M_050219_2,6898,TPPTAQVV True True TPPTAQVV 36.996065 406.729174792767 65392038.0 6893.0 ENST00000466066.1_1_1:113202257-113212751:+|nuORF;;ENSG00000116489|ENST00000263168|CAPZA1 5.68516190846761 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6899 36.999 122.0 761700.0 25 0 85561.0 + -1 MPKLGKARLI 10 89 571.8571759380762 1141.6997989429524 2 571.8575927615166 MULTI CID FTMS 0 0 0 6893 763504.4375 0.339903473094359 -4 0.3358268737792969 6 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 20.453626601364224 0.5043500229302764 4 {M(Oxidation (M))|F}PQK{I|L}KR{I|L}{I|L} 9 -1 + 54.447 0.0 0.0 4.7689 4.7689 80.526 0.0 0.0 0.0 47.45699154527294 2.922152515121219 2.922152515121219 9.208187539523747 0 0.805462187404089 0.0 0.0 0.5 {M(Oxidation (M))|F}PQK{I|L}KR{I|L}{I|L};{M(Oxidation (M))|F}P[AG]K{I|L}KR{I|L}{I|L} 4.7689;3.9624 -;- 73 + 1 2.073 73710.3 1.0 2549 4348 6893 HBL1_DMSO_200M_050219_2,6899 HBL1_DMSO_200M_050219_2,6899,MPKLGKARLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6900 37.001 131.0 438200.0 25 0 76942.0 + 45150 YQEGAKMAV 9 89 498.7443781419802 995.4742033507604 2 498.7445861697197 MULTI CID FTMS 0 0 0 6893 485453.15625 1.0 0 0.0 7 Unmodified _YQEGAKMAV_ ENSG00000173801|ENST00000393931|JUP 36.12702656103203 0.0967173616627612 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KMAVQY 8 5 + 45.699 0.0 0.0 4.5907 4.5907 77.023 0.0 0.0 0.0 6.963305589062927 16.40978057358332 6.963305589062927 6.963305589062927 0 0.0 0.0 0.7302046884880937 0.2302046884880938 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KMAVQY;{[DA]|[EG]}AKMAVQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KMAV[AG]Y;[YQ][QP]AVQY;[KA]{[DA]|[EG]}MAVQY;[NS][{I|L}A]MAVQY;[QT][VG]MAVQY;{[DA]|[EG]}AKMAV[AG]Y;[YQ][QP]AV[AG]Y;[YQ][RK]E{[WS]|[C(Carbamidomethyl (C)){I|L}]} 4.5907;3.8912;3.6602;3.5785;3.3316;3.0292;3.0292;2.9662;2.648;2.5674 -;-;-;-;-;-;-;-;-;- 421 1 2.073 50195.9 1.0 2550 4348 6893 HBL1_DMSO_200M_050219_2,6900 HBL1_DMSO_200M_050219_2,6900,YQEGAKMAV True True YQEGAKMAV 37.001246 498.74458616972 3563806.5 6893.0 ENSG00000173801|ENST00000393931|JUP 5.9067145983378095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6901 37.006 269.0 343970.0 25 0 23412.0 + 30616 RFIEATKQY 9 112 578.3114566297093 1154.6083603262184 2 578.3115112185478 MULTI CID FTMS 0 0 0 6893 322756.21875 1.0 0 0.0 8 Unmodified _RFIEATKQY_ ENSG00000095585|ENST00000224337|BLNK;nc|ENSG00000095585|Q8WV28-2|BLNK 31.26834338654808 0.1333407332142048 4 ATKQY 5 4 49.187 0.0 0.0 4.2601 0.0 0.0 545.2973499982437 0.0 545.2973499982437 0.0 32.632717555561456 0.0 0.0 0 0.6139829889124311 0.0 0.8807196863200843 0.3807196863200844 + ATKQY 4.2601 + + 210 1 2.073 73749.8 1.0 2551 4348 6893 HBL1_DMSO_200M_050219_2,6901 HBL1_DMSO_200M_050219_2,6901,RFIEATKQY False True RFIEATKQY 37.006234 578.311511218548 2507587.5 6893.0 ENSG00000095585|ENST00000224337|BLNK;;nc|ENSG00000095585|Q8WV28-2|BLNK 2.3445184032122293 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6902 37.011 255.0 291240.0 25 0 21172.0 + -1 YPKMFHGMY 9 95 402.5078189212461 1204.5016273639385 3 402.8416931033134 MULTI CID FTMS 0 0 0 6893 286295.03125 1.0 0 0.0 9 2 Oxidation (M) _YPKM(Oxidation (M))FHGM(Oxidation (M))Y_ REV__ENSG00000165684|ENST00000684778|SNAPC4 2.9952420565917617 0.8101217823238775 4 PY 2 -1 10.969 0.0 0.0 0.91068 0.0 0.0 348.1441494901207 593.21910244486 941.3632519349808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PY 0.91068 - 75 + 1 2.073 62530.9 1.0 2552 4348 6893 HBL1_DMSO_200M_050219_2,6902 HBL1_DMSO_200M_050219_2,6902,YPKMFHGMY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6903 37.018 396.0 298580.0 25 0 30610.0 + 3173 AVVAGIAKA 9 124 400.2555766446554 798.4966003561108 2 400.2552062869072 MULTI CID FTMS 0 0 0 6893 225089.875 1.0 0 0.0 10 Unmodified _AVVAGIAKA_ ENSG00000159131|ENST00000381815|GART;ENST00000424203.5_1_21:34876433-34900844:-|nuORF 34.10243960390752 0.1078313939113124 4 {[VA]|[{I|L}G]}VAAVAKA 9 2 + 55.883 0.0 0.0 6.9986 6.9986 87.404 0.0 0.0 0.0 26.172134023570948 1.7508318932272715 1.7508318932272715 7.809771275310105 0 1.307902146726378 2.0 0.0 0.1923877696554315 {[VA]|[{I|L}G]}VAAVAKA;{[VA]|[{I|L}G]}VA[Q{I|L}]KA;{[VA]|[{I|L}G]}V[Q{I|L}]AKA 6.9986;6.0205;5.6132 -;-;- 271 + 1 2.073 96986.2 1.0 2553 4348 6893 HBL1_DMSO_200M_050219_2,6903 HBL1_DMSO_200M_050219_2,6903,AVVAGIAKA True True AVVAGIAKA 37.018034 400.255206286907 1312133.375 6893.0 ENST00000424203.5_1_21:34876433-34900844:-|nuORF;;ENSG00000159131|ENST00000381815|GART 3.429768244425456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6904 37.024 334.0 193390.0 25 0 15767.0 + 17911 KQTPDFHTV 9 123 536.7747492606479 1071.5349455880958 2 536.7744628787041 MULTI CID FTMS 0 0 0 6893 227362.625 1.0 0 0.0 11 Unmodified _KQTPDFHTV_ ENSG00000130935|ENST00000253247|NOL11;ENST00000583108.5_1_17:65733207-65733809:+|nuORF 86.33184430468982 0.0159826143231117 4 [KA]GT[DP]{M(Oxidation (M))|F}HTV 10 2 + 46.889 0.0 0.0 4.3758 4.3758 72.057 0.0 0.0 0.0 3.521825181113627 14.350831322769928 3.521825181113627 3.521825181113627 0 1.9143943297944483 0.0 0.5 0.6861818737241735 [KA]GT[DP]{M(Oxidation (M))|F}HTV;[KQ]T[DP]{M(Oxidation (M))|F}HTV;[AG]KT[DP]{M(Oxidation (M))|F}HTV;{[{M(Oxidation (M))|F}H]|[RQ]}{[RE]|[WV]}{M(Oxidation (M))|F}HTV;[{I|L}A][NG][DV]{M(Oxidation (M))|F}HTV;[{I|L}A][NG]{M(Oxidation (M))|F}[DV]HTV;[KA]GT[DP]{NN|[MP]|[D{I|L}]|[EV]}QK;[DP]K[QT]{M(Oxidation (M))|F}HTV;[KQ]T[DP]{NN|[MP]|[D{I|L}]|[EV]}QK;[AG]KT[DP]{NN|[MP]|[D{I|L}]|[EV]}QK 4.3758;4.0472;4.0244;2.6577;2.5873;2.2798;2.1141;1.836;1.7855;1.7627 -;+;-;-;-;-;-;-;-;- + 535 1 2.073 53387.1 1.0 2554 4348 6893 HBL1_DMSO_200M_050219_2,6904 HBL1_DMSO_200M_050219_2,6904,KQTPDFHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6905 37.038 800.0 404150.0 25 0 18856.0 + 36598 TANRHVLRI 9 213 360.55286599091846 1078.6367685729554 3 360.5523864626884 MULTI CID FTMS 0 0 0 6893 185534.4375 0.7423495051963572 -1 0.0966758728027343 12 Unmodified _TANRHVLRI_ ENSG00000102699|ENST00000381989|PARP4 53.31671820480216 0.0330978755772958 4 TA[RN]HV{I|L}R{I|L} 9 0 + 88.264 0.0 0.0 8.1829 8.1829 78.467 0.0 0.0 0.0 25.18950376349061 0.0269751594335332 0.0269751594335332 0.0269751594335332 0 1.6470950735091925 2.0 0.0 1.0189301784845295 + + TA[RN]HV{I|L}R{I|L};TA[RN]HV{I|L}{I|L}R;TA{I|L}NRHVR{I|L};TA{I|L}NRHV{I|L}R;TA[RN]H{I|L}VR{I|L};TA[RN]H{I|L}V{I|L}R;TA{I|L}GGRHVR{I|L};TA{I|L}GGRHV{I|L}R;TA[RN]{I|L}HVR{I|L};TA[RN]{I|L}HV{I|L}R 8.1829;8.1804;7.4355;7.433;7.3995;7.397;6.5818;6.5793;6.2145;6.212 +;-;-;-;-;-;-;-;-;- + 1188 + 1 2.073 261574.4 0.75 2555 4348 6893 HBL1_DMSO_200M_050219_2,6905 HBL1_DMSO_200M_050219_2,6905,TANRHVLRI True True TANRHVLRI 37.037904 360.552386462688 1710688.75 6893.0 ENSG00000102699|ENST00000381989|PARP4 2.600711445013682 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6906 37.046 443.0 195580.0 25 0 14393.0 + 2418 AQQITQTEV 9 127 509.2642020520284 1016.5138511708568 2 509.2644531130791 MULTI CID FTMS 0 0 0 6893 176040.765625 0.7427043101021708 -5 0.450836181640625 13 Unmodified _AQQITQTEV_ ENSG00000066136|ENST00000447388|NFYC;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC 64.23631603340823 0.0237365939569086 4 [AG]AQ{I|L}T 6 6 32.914 0.0 0.0 3.2379 0.0 0.0 0.0 472.2035233722818 472.2035233722818 18.309489524090736 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2887254899964357 0.5189301784845296 [AG]AQ{I|L}T 3.2379 - 694 1 2.073 70346.7 1.0 2556 4348 6893 HBL1_DMSO_200M_050219_2,6906 HBL1_DMSO_200M_050219_2,6906,AQQITQTEV True True AQQITQTEV 37.045775 509.264453113079 2247727.25 6893.0 ENSG00000066136|ENST00000447388|NFYC;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC 5.404094378153483 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6907 37.06 800.0 197330.0 25 0 15706.0 29364 QKKELDTIQ 9 199 368.2064448843865 0 368.2192260622978 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _QKKELDTIQ_ ENSG00000137831|ENST00000322954|UACA;nc|ENSG00000137831|Q9BZF9-2|UACA 6.630372943996041 0.3444685223463734 4 P 1 9 4.8708 0.0 0.0 0.66323 0.0 0.0 95.02774464982924 539.2966402643186 634.3243849141479 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 P 0.66323 - 28 + 1 2.073 128336.8 0.6499999761581421 2557 4348 6893 HBL1_DMSO_200M_050219_2,6907 HBL1_DMSO_200M_050219_2,6907,QKKELDTIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6908 37.069 521.0 278070.0 25 0 21533.0 43863 YFLRNSQI 8 172 347.5222672854794 0 347.5222656130791 PEAK CID FTMS 0 0 0 6893 148368.875 1.0 0 0.0 15 Unmodified _YFLRNSQI_ ENSG00000152380|ENST00000282226|FAM151B;ENST00000509292.1_1_5:79797630-79817970:+|nuORF 19.256988751693697 0.4320151646958274 4 E 1 8 7.7866 0.0 0.0 1.1236 0.0 0.0 76.70217509654636 484.26328455142817 560.9654596479745 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 E 1.1236 - 16 + 1 2.073 120800.2 1.0 2558 4348 6893 HBL1_DMSO_200M_050219_2,6908 HBL1_DMSO_200M_050219_2,6908,YFLRNSQI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6909 37.084 800.0 141310.0 25 0 22806.0 + 24403 MFPERVRSA 9 112 546.7850829958916 0 546.7850829958916 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _MFPERVRSA_ ENSG00000100216|ENST00000216034|TOMM22;ENST00000492561.1_1_22:39078186-39079843:+|nuORF 17.11289562659939 0.230679707888486 4 PN 2 8 6.6824 0.0 0.0 0.61219 0.0 0.0 112.04470847836816 765.3916939057245 877.4364023840927 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 PN 0.61219 - 72 + 1 2.073 90603.1 0.7300000190734863 2559 4348 6893 HBL1_DMSO_200M_050219_2,6909 HBL1_DMSO_200M_050219_2,6909,MFPERVRSA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6910 37.098 800.0 142980.0 25 0 13543.0 + 32293 RWPKKSAEF 9 123 574.8141299707913 1147.6137070083826 2 575.3165161013603 MULTI CID FTMS 0 0 0 6893 125326.4453125 0.5368253326591415 -12 0.6486625671386719 17 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 36.12702656103203 0.0967173616627612 4 [WR][KP]KSA{M(Oxidation (M))|F}E 9 2 + 56.959 0.0 0.0 4.9633 4.9633 84.597 0.0 0.0 0.0 16.34143808327238 44.48470379211543 16.34143808327238 17.81189454565719 0 0.3054621874040891 1.154901959985743 0.0 0.8252574989159953 [WR][KP]KSA{M(Oxidation (M))|F}E;[KP][WR]KSA{M(Oxidation (M))|F}E;{[CP]|[EA]}S[R{I|L}]{I|L}{I|L}A{M(Oxidation (M))|F}E;{M(Oxidation (M))|F}{M(Oxidation (M))|F}A{I|L}{I|L}[R{I|L}]D[PG] 4.9633;3.4112;1.439;1.0562 -;-;-;- 299 1 2.073 90515.8 0.7099999785423279 2560 4348 6893 HBL1_DMSO_200M_050219_2,6910 HBL1_DMSO_200M_050219_2,6910,RWPKKSAEF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6912 37.102 2.2 17197000.0 25 0 1019400.0 + 26605 NVPWTRTI 8 74 493.7726739544863 985.5307949757728 2 493.7727233767509 MULTI CID FTMS 0 0 0 6911 31136684.0 1.0 0 0.0 1 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 25.399314129420983 0.5099049743284904 4 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L} 9 -1 + 43.235 0.0 0.0 4.387 4.387 79.076 0.0 0.0 0.0 5.059991111671067 16.579853937541742 5.059991111671067 9.208187539523747 0 1.3494850021680094 0.0 0.0 0.6307196863200843 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GGGT{I|L};{[NV]|[RG]}R[NP]HH{I|L} 4.387;3.4527;0.50109 -;-;- 102 1 2.052 36102.0 1.0 2561 4349 6911 HBL1_DMSO_200M_050219_2,6912 HBL1_DMSO_200M_050219_2,6912,NVPWTRTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6913 37.105 163.0 259160.0 25 0 21408.0 + 43917 GYGGGYGGQSSM 12 79 560.721765324615 1119.42897771603 2 560.7227050662041 MULTI CID FTMS 0 0 0 6911 563578.625 0.0955464404930864 3 -0.0956764221191406 2 Unmodified _YGGGGNYNDFG_ ENST00000515481.5_1_5:179043097-179043181:-|nuORF;ENSG00000126945|ENST00000316594|HNRNPH2;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 10.823927491677226 0.8099964156050846 4 YGNG 4 7 24.17 0.0 0.0 2.1592 0.0 0.0 593.2106072099738 132.04590784244377 725.2565150524175 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6747425010840047 YGNG 2.1592 - 765 + 1 2.052 36921.7 1.0 2562 4349 6911 HBL1_DMSO_200M_050219_2,6913 HBL1_DMSO_200M_050219_2,6913,YGGGGNYNDFG False False GYGGGYGGQSSM 37.105337 560.722705066204 124741932.0 6911.0 ENST00000515481.5_1_5:179043097-179043181:-|nuORF;;ENSG00000126945|ENST00000316594|HNRNPH2;;ENSG00000169045|ENST00000393432|HNRNPH1;;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 6.537147521972656 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6914 37.107 80.0 691640.0 25 0 99759.0 22165 LPPTLGPR 8 51 425.7610386944438 849.5075244556876 2 425.7610351443291 MULTI CID FTMS 0 0 0 6911 808042.375 0.7791591874099589 2 -0.0542869567871093 3 Unmodified _LPPTLGPR_ nc|ENSG00000144485|Q96HZ4-2|HES6 26.88365393820708 0.4786498634179528 4 {I|L}PP 3 5 53.698 0.0 0.0 6.3211 0.0 0.0 0.0 539.2959225339087 539.2959225339087 41.70818753952375 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 + {I|L}PP 6.3211 + + 33 + 1 2.052 50813.2 1.0 2563 4349 6911 HBL1_DMSO_200M_050219_2,6914 HBL1_DMSO_200M_050219_2,6914,LPPTLGPR False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 6916 37.111 79.0 635330.0 25 0 85495.0 23975 LVTEGLPRD 9 72 500.27723412962 998.53991532604 2 500.2776061892509 MULTI CID FTMS 0 0 0 6915 682713.1875 0.7166603114635617 -8 0.5768318176269531 1 Unmodified _LVTEGLPRD_ ENST00000456721.2_2_20:60928053-60928212:+|nuORF 20.453626601364224 0.2830276176381075 4 {I|L}VD 3 6 50.005 0.0 0.0 5.0078 0.0 0.0 0.0 668.3378389947874 668.3378389947874 39.167629009615965 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}VD 5.0078 - 70 + 1 2.052 42578.6 1.0 2564 4350 6915 HBL1_DMSO_200M_050219_2,6916 HBL1_DMSO_200M_050219_2,6916,LVTEGLPRD False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6917 37.118 390.0 459100.0 25 0 51932.0 -1 0 159 336.1121268005461 670.2097006678922 2 336.1118041872978 MULTI CID FTMS 0 0 0 6915 315331.75 0.7949479376338783 4 -0.1906318664550781 2 4 EC(Carbamidomethyl (C)) 2 -1 17.959 0.0 0.0 2.6796 0.0 0.0 363.1254529564423 0.0 363.1254529564423 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 EC(Carbamidomethyl (C)) 2.6796 - 86 + 1 2.052 142099.6 1.0 2565 4350 6915 HBL1_DMSO_200M_050219_2,6917 HBL1_DMSO_200M_050219_2,6917, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6918 37.12 98.0 650320.0 25 0 97451.0 + 32567 SASGPLHSV 9 92 427.7223913105135 853.430229687827 2 427.7220031619072 MULTI CID FTMS 0 0 0 6915 587911.4375 0.7525546350324233 -3 0.2172203063964843 3 Unmodified _SASGPLHSV_ ENSG00000166025|ENST00000433060|AMOTL1;nc|ENSG00000166025|Q8IY63-2|AMOTL1 43.85829265575387 0.0542763391141878 4 {[SA]|[TG]}SGP{I|L}H[VS] 9 0 + 55.313 0.0 0.0 6.4812 6.4812 91.131 0.0 0.0 0.0 45.98058187407541 5.629005157155831 5.629005157155831 20.242275032520133 0 0.75 2.0 0.3252574989159953 0.0 + + {[SA]|[TG]}SGP{I|L}H[VS];{[SA]|[TG]}SGPVV[HT];{[SA]|[TG]}[YK]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L} 6.4812;4.1094;2.0261 +;-;- + 123 + 1 2.052 55315.0 1.0 2566 4350 6915 HBL1_DMSO_200M_050219_2,6918 HBL1_DMSO_200M_050219_2,6918,SASGPLHSV True True SASGPLHSV 37.120435 427.723 9086463.0 6915.0 ENSG00000166025|ENST00000433060|AMOTL1;;nc|ENSG00000166025|Q8IY63-2|AMOTL1 7.257438500722249 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6919 37.125 218.0 479790.0 25 0 49742.0 + 29787 QPYYATRVN 9 98 556.2799265797648 1110.5453002263296 2 556.2800170779228 MULTI CID FTMS 0 0 0 6915 359268.15625 0.5619547784174127 -2 0.12054443359375 4 Unmodified _QPYYATRVN_ ENSG00000111679|ENST00000318974|PTPN6;ENST00000416215.6_1_12:7061038-7070080:+|nuORF;nc|ENSG00000111679|P29350-2|PTPN6;nc|ENSG00000111679|P29350-3|PTPN6;nc|ENSG00000111679|P29350-4|PTPN6 13.90604991867851 0.4602628045680013 4 [QP]YYN{[QV]|[N{I|L}]|[RA]|[KV]}TV 9 4 + 34.497 0.0 0.0 3.1063 3.1063 70.422 0.0 0.0 0.0 18.78391479438148 0.2396584092155222 0.2396584092155222 5.222763947111528 0 0.5 0.0 0.0 1.1861818737241734 [QP]YYN{[QV]|[N{I|L}]|[RA]|[KV]}TV;[QP]YYN{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S;[QP]YYGG{[QV]|[N{I|L}]|[RA]|[KV]}TV;[QP]YYGG{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S;[QP]Y[HT]N[VP]GV;[QP]V{[QC]|[C(Carbamidomethyl (C))A]}AN[VP]GV 3.1063;2.636;2.2772;1.8069;1.3922;0.78869 -;-;-;-;-;- 159 + 1 2.052 86950.7 1.0 2567 4350 6915 HBL1_DMSO_200M_050219_2,6919 HBL1_DMSO_200M_050219_2,6919,QPYYATRVN False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6920 37.138 800.0 160810.0 25 0 28498.0 + 35266 SSFPSHEVKEV 11 120 623.3074560379081 0 623.3097411990166 PEAK CID FTMS 0 0 0 6915 201150.03125 0.7688700146056373 -2 0.12054443359375 5 Unmodified _SSFPSHEVKEV_ REV__ENSG00000120733|ENST00000314358|KDM3B;REV__nc|ENSG00000120733|Q7LBC6-2|KDM3B 18.1463463914782 0.3750318954284983 4 VSSVE 5 -1 28.461 0.0 0.0 2.2867 0.0 0.0 640.3122254529661 100.02332483463124 740.3355502875974 0.0 0.0 0.0 0.0 0 0.0 0.0 1.5044321917401078 0.0 VSSVE 2.2867 - 114 + 1 2.052 98322.5 0.949999988079071 2568 4350 6915 HBL1_DMSO_200M_050219_2,6920 HBL1_DMSO_200M_050219_2,6920,SSFPSHEVKEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6921 37.152 800.0 313910.0 25 0 37029.0 + 5070 DGYEQAARV 9 155 504.7409398526873 1007.4673267721746 2 504.7407104372978 MULTI CID FTMS 0 0 0 6915 165928.25 0.0005689252162768 113 -5.221096038818359 6 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 39.94969957227396 0.0757326808254658 4 [DG]YEQAARV 9 0 + 51.833 0.0 0.0 5.1449 5.1449 82.105 0.0 0.0 0.0 40.0939763876162 5.588732180528659 5.588732180528659 9.208187539523747 0 0.5891368308784531 0.8239087409443188 0.4247425010840047 0.6307196863200843 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YEQA{[NV]|[RG]}{I|L};[DG]YV[DN]ARV;[DG]YE[AG]A{[NV]|[RG]}{I|L};{[SA]|[TG]}M[KG]VVDDS;[DG]YV[DN]{[NV]|[RG]}{I|L};[DG]YVV[KG]C[PA];[VS]C[KG]VVDDS;[DV]{[{M(Oxidation (M))|F}C]|[YS]}QA{[NV]|[RG]}{I|L} 5.1449;4.2309;4.0561;3.2837;3.1421;2.5279;2.1949;1.6449;1.4805;1.3252 +;-;-;-;-;-;-;-;-;- + 400 + 1 2.052 193614.1 0.8299999833106995 2569 4350 6915 HBL1_DMSO_200M_050219_2,6921 HBL1_DMSO_200M_050219_2,6921,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6923 37.158 203.0 438620.0 25 0 39152.0 + 43140 VYPILLQLM 9 103 363.8854451498512 1088.6345060497536 3 363.8853027224541 MULTI CID FTMS 0 0 0 6922 362295.6875 0.8933737396808195 3 -0.1455612182617187 1 Unmodified _VYPILLQLM_ REV__ENST00000462343.1_1_2:10266966-10267371:+|nuORF 8.593279151180031 0.6146971463335029 4 PHE 3 -1 13.188 0.0 0.0 1.2114 0.0 0.0 98.03921846611384 624.4202974908811 722.459515956995 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PHE 1.2114 - 66 + 1 2.052 86079.5 1.0 2570 4351 6922 HBL1_DMSO_200M_050219_2,6923 HBL1_DMSO_200M_050219_2,6923,VYPILLQLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6924 37.172 800.0 132120.0 25 0 12413.0 + 16356 IYPEKQEPY 9 100 583.7902361592892 1165.5659193853785 2 583.7894164919853 MULTI CID FTMS 0 0 0 6922 75865.59375 0.4472208446963863 3 -0.1455612182617187 2 Unmodified _IYPEKQEPY_ ENSG00000105963|ENST00000265846|ADAP1;nc|ENSG00000105963|O75689-2|ADAP1;nc|ENSG00000105963|O75689-3|ADAP1 25.399314129420983 0.2080152500878129 4 [EP]KQEPY[Y{I|L}] 9 4 + 53.243 0.0 0.0 4.568 4.568 71.703 0.0 0.0 0.0 6.248081165126365 4.137342758552691 4.137342758552691 3.0102999566398125 0 0.0 1.5228787452803376 0.5774509799928715 0.2396518287104437 [EP]KQEPY[Y{I|L}];[EP]KQEYP[Y{I|L}];[EP]K[AG]EPY[Y{I|L}];[Y{I|L}]PE[QA][VS]PY;[EP]K[AG]EYP[Y{I|L}];[Y{I|L}]P[QA]E[VS]PY;[Y{I|L}]P[TP][C(Carbamidomethyl (C))R]PY;[Y{I|L}]PE[QA][VS]YP;[Y{I|L}]P[QA]E[VS]YP;[Y{I|L}]P[TP][C(Carbamidomethyl (C))R]YP 4.568;4.3097;3.778;3.6082;3.5197;3.1414;3.1376;3.0916;2.6248;2.6211 -;-;-;-;-;-;-;-;-;- 324 1 2.052 82893.3 0.6800000071525574 2571 4351 6922 HBL1_DMSO_200M_050219_2,6924 HBL1_DMSO_200M_050219_2,6924,IYPEKQEPY False True IYPEKQEPY 37.171866 583.789416491985 3058492.0 6922.0 nc|ENSG00000105963|O75689-2|ADAP1;;nc|ENSG00000105963|O75689-3|ADAP1;;ENSG00000105963|ENST00000265846|ADAP1 5.228644212086995 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6925 37.18 449.0 377640.0 25 0 21627.0 + 12998 HALSWNSV 8 130 457.2301337914486 912.4457146496972 2 457.2293578982353 MULTI CID FTMS 0 0 0 6922 200099.875 0.4902080813339253 -3 0.1656150817871093 3 Unmodified _HALSWNSV_ REV__ENST00000219069.5_1_16:3333246-3333393:+|nuORF 19.438996006549623 0.6237395211498085 4 [HA]{M(Oxidation (M))|F}QPQ[VS] 8 -1 + 42.468 0.0 0.0 4.6543 4.6543 80.782 0.0 0.0 0.0 15.94212497064703 28.73538447187963 15.94212497064703 9.262137858390808 0 0.5 1.0457574905606752 0.0 0.2396518287104437 [HA]{M(Oxidation (M))|F}QPQ[VS];[HA]{M(Oxidation (M))|F}QP[AG][VS];[HA]{M(Oxidation (M))|F}[AG]PQ[VS];[HA]{M(Oxidation (M))|F}[AG]P[AG][VS];{I|L}{I|L}{[DA]|[EG]}KN[HC];{I|L}{I|L}{I|L}[NS]N[HC] 4.6543;3.6393;3.3766;2.3674;0.5057;0.23934 -;-;-;-;-;- 185 1 2.052 133367.1 1.0 2572 4351 6922 HBL1_DMSO_200M_050219_2,6925 HBL1_DMSO_200M_050219_2,6925,HALSWNSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6926 37.194 800.0 105780.0 25 0 13033.0 -1 LIHCMMYHY 9 89 634.2765991091728 0 634.2765991091728 PEAK CID FTMS 0 0 0 -1 0 4 Carbamidomethyl (C) _LIHC(Carbamidomethyl (C))MMYHY_ ENSG00000170185|ENST00000307017|USP38;nc|ENSG00000170185|Q8NB14-2|USP38 14.581692164780916 0.2597149829103905 4 HY 2 -1 17.351 0.0 0.0 1.37 0.0 0.0 181.08007605083736 782.3126150674299 963.3926911182672 0.0 0.0 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.0 HY 1.37 + + 35 + 1 2.052 69084.9 0.6100000143051147 2573 4351 6922 HBL1_DMSO_200M_050219_2,6926 HBL1_DMSO_200M_050219_2,6926,LIHCMMYHY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6928 37.198 2.8 21178000.0 25 0 2839600.0 + 6385 DWAKLIKRL 9 76 381.5741944535738 1141.7007539609217 3 381.5742065310478 MULTI CID FTMS 0 0 0 6927 20618616.0 1.0 0 0.0 1 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 7.608950283845883 0.6490595679007971 4 {M(Oxidation (M))|F}[QP]K{I|L}K[R{I|L}]{I|L} 9 -1 + 31.884 0.0 0.0 2.7927 2.7927 75.809 0.0 0.0 0.0 19.894549897933874 3.467874862246564 3.467874862246564 10.04432191740108 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[QP]K{I|L}K[R{I|L}]{I|L};[PG]A{M(Oxidation (M))|F}K{I|L}K[R{I|L}]{I|L} 2.7927;1.9129 -;- 36 + 1 2.028 54061.7 1.0 2574 4352 6927 HBL1_DMSO_200M_050219_2,6928 HBL1_DMSO_200M_050219_2,6928,DWAKLIKRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6929 37.199 48.0 1235000.0 25 0 144510.0 + 32286 RWPKKSAEF 9 95 383.5453438582354 1147.6142021749065 3 383.5449401736259 MULTI CID FTMS 0 0 0 6927 1116117.125 0.5514606801252268 -10 0.6632919311523438 2 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 18.1463463914782 0.3454829746528889 4 [WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F} 9 0 + 47.381 0.0 0.0 4.1287 4.1287 70.085 0.0 0.0 0.0 19.71726222832956 41.89651225317682 19.71726222832956 3.0102999566398125 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + + [WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F};[WR][KP]S[KA]E{M(Oxidation (M))|F};[WR][KP]K{[WT]|[RM]}{M(Oxidation (M))|F};[KP][WR]K{[SA]|[TG]}E{M(Oxidation (M))|F};[KP]SARR{[SA]|[TG]}E{M(Oxidation (M))|F};[KP][WR]S[KA]E{M(Oxidation (M))|F};[KP][WR]K{[WT]|[RM]}{M(Oxidation (M))|F};[KP]S[WR][KA]E{M(Oxidation (M))|F} 4.1287;3.8663;3.5642;1.9702;1.7524;1.7079;1.4057;1.1832 +;-;-;-;-;-;-;- + 370 1 2.028 53043.1 1.0 2575 4352 6927 HBL1_DMSO_200M_050219_2,6929 HBL1_DMSO_200M_050219_2,6929,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6930 37.201 62.0 1352300.0 25 0 105420.0 + 40721 VLHPRYAIV 9 72 356.5490876363513 1066.625433509254 3 356.5488464236259 MULTI CID FTMS 0 0 0 6927 869372.25 0.2668659015898275 -4 0.2070045471191406 3 Unmodified _VLHPRYAIV_ REV__ENST00000547892.1_1_19:49122178-49122400:-|nuORF 10.823927491677226 0.5436922275383211 4 {I|L}{I|L}V 3 -1 25.93 0.0 0.0 2.431 0.0 0.0 723.379937896321 0.0 723.379937896321 0.0 9.47621246364342 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}{I|L}V 2.431 - 17 1 2.028 77212.0 1.0 2576 4352 6927 HBL1_DMSO_200M_050219_2,6930 HBL1_DMSO_200M_050219_2,6930,VLHPRYAIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6931 37.214 785.0 149500.0 25 0 17863.0 + 18189 KVADSKTLLES 11 150 595.8350075379486 1189.6554621426972 2 595.8360473513603 MULTI CID FTMS 0 0 0 6927 263344.59375 0.9311809020016734 -2 0.0864601135253906 4 Unmodified _KVADSKTLLES_ ENSG00000104889|ENST00000221486|RNASEH2A;ENST00000590121.1_1_19:12917502-12918326:+|nuORF;ENST00000590279.1_1_19:12917826-12918144:+|nuORF 80.23954778395604 0.0074784772210252 4 VADS[{I|L}T]K{I|L}TD 10 5 59.0 0.0 0.0 4.9595 0.0 0.0 128.09549147773595 0.0 128.09549147773595 0.0 10.199508371931444 0.0 0.0 0 2.2128493362984765 0.0 0.6747425010840047 0.25 VADS[{I|L}T]K{I|L}TD 4.9595 - 5539 1 2.028 87376.7 1.0 2577 4352 6927 HBL1_DMSO_200M_050219_2,6931 HBL1_DMSO_200M_050219_2,6931,KVADSKTLLES True True KVADSKTLLES 37.214178 595.83604735136 2350285.5 6927.0 ENST00000590279.1_1_19:12917826-12918144:+|nuORF;;ENSG00000104889|ENST00000221486|RNASEH2A;;ENST00000590121.1_1_19:12917502-12918326:+|nuORF 7.063159306844075 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6932 37.221 391.0 275220.0 25 0 25126.0 + 24402 MFPERVRSA 9 115 364.8592125722053 1091.5558083168155 3 364.8590270876884 MULTI CID FTMS 0 0 0 6927 241162.078125 0.7941780856808633 -2 0.0864601135253906 5 Unmodified _MFPERVRSA_ ENSG00000100216|ENST00000216034|TOMM22;ENST00000492561.1_1_22:39078186-39079843:+|nuORF 32.78568957990786 0.1150597335874693 4 M{M(Oxidation (M))|F}PER 5 4 41.057 0.0 0.0 3.7614 0.0 0.0 0.0 428.2269075983032 428.2269075983032 29.374854021094947 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 1.2302046884880935 + M{M(Oxidation (M))|F}PER 3.7614 + + 82 + 1 2.028 98583.8 1.0 2578 4352 6927 HBL1_DMSO_200M_050219_2,6932 HBL1_DMSO_200M_050219_2,6932,MFPERVRSA True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6934 37.237 800.0 191900.0 25 0 13380.0 + 3787 DAHRSHPFI 9 149 540.2737007812023 0 540.2723876833916 PEAK CID FTMS 0 0 0 6933 109001.6640625 0.1822494299306052 -2 0.0688934326171875 1 Unmodified _DAHRSHPFI_ ENSG00000105669|ENST00000262812|COPE;ENST00000595984.5_1_19:19010490-19010792:-|nuORF;ENST00000598969.5_1_19:19010490-19016602:-|nuORF;nc|ENSG00000105669|O14579-2|COPE;nc|ENSG00000105669|O14579-3|COPE 35.61225514009592 0.0832881035976632 4 {M(Oxidation (M))|F}PDWWM 6 9 28.464 0.0 0.0 2.6392 0.0 0.0 131.09573092870954 82.06698023013905 213.1627111588486 0.0 0.0 0.0 0.0 0 1.089136830878453 0.0 0.3494850021680094 0.0 {M(Oxidation (M))|F}PDWWM 2.6392 - 980 + 1 2.028 123637.5 0.8199999928474426 2579 4353 6933 HBL1_DMSO_200M_050219_2,6934 HBL1_DMSO_200M_050219_2,6934,DAHRSHPFI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6935 37.251 790.0 244510.0 25 0 128920.0 + 41751 VPTPTSTV 8 72 801.4338625019108 800.4265860353107 1 801.4340698122978 MULTI CID FTMS 0 0 0 6933 296280.875 0.6384586251889587 4 -0.1689376831054687 2 Unmodified _VPTPTSTV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 89.42679046578446 0.050933533736698 4 VPT[TP]{[WT]|[RM]} 7 2 + 59.313 0.0 0.0 7.4102 7.4102 81.842 0.0 0.0 0.0 17.653631197717985 2.749000602454572 2.749000602454572 2.749000602454572 0 1.3494850021680094 1.154901959985743 1.305462187404089 0.0 VPT[TP]{[WT]|[RM]};[VP]T[TP]STV;VPTHK[YG];[VP]T{[MG]|[TS]}TPV;[TP]STVTPV;[VP]T{[MG]|[TS]}PTV;[TP]STVPTV;[TP]V[TP]STV;[VP]T[DG]{I|L}TV;VPHTK[YG] 7.4102;7.0668;6.9011;6.5856;6.5434;6.4261;6.3839;5.812;5.6134;5.5242 -;+;-;-;-;-;-;-;-;- + 448 + 1 2.028 139007.3 1.0 2580 4353 6933 HBL1_DMSO_200M_050219_2,6935 HBL1_DMSO_200M_050219_2,6935,VPTPTSTV True True VPTPTSTV 37.250566 801.434069812298 4756257.0 6933.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 7.228352387746175 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6936 37.264 766.0 366200.0 25 0 114490.0 + 22219 LPRDRQALV 9 163 534.3200628330959 1066.6255727329917 2 534.3211547732353 MULTI CID FTMS 0 0 0 6933 247928.3125 0.3242825687368411 -6 0.3311843872070312 3 Unmodified _LPRDRQALV_ ENSG00000112576|ENST00000372991|CCND3;ENST00000505672.5_1_6:41904922-42016364:-|nuORF;ENST00000505884.5_1_6:41904922-41997824:-|nuORF;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;ENST00000511161.5_1_6:41904922-42016364:-|nuORF;ENST00000513956.5_1_6:41904284-42016364:-|nuORF;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3 69.10491478415734 0.0214449631113747 4 {I|L}PRD 4 5 34.539 0.0 0.0 3.2381 0.0 0.0 0.0 582.3371032228147 582.3371032228147 2.5488658727822866 0.0 0.0 0.0 0 0.9489700043360187 1.154901959985743 0.3494850021680094 0.3807196863200844 + {I|L}PRD 3.2381 + + 504 + 1 2.028 217765.2 1.0 2581 4353 6933 HBL1_DMSO_200M_050219_2,6936 HBL1_DMSO_200M_050219_2,6936,LPRDRQALV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6937 37.27 352.0 307010.0 25 0 47936.0 + -1 YENEVALR 8 118 497.25654762581246 992.4985423184248 2 497.7541992068291 MULTI CID FTMS 0 0 0 6933 250960.46875 0.6728111405987103 -9 0.5703353881835938 4 Carbamidomethyl (C) _YEKALPLC(Carbamidomethyl (C))_ ENSG00000186395|ENST00000269576|KRT10;P13645 32.116972079565 0.368454113111938 4 YENEVA{I|L}R 8 -1 + 94.638 0.0 0.0 9.5353 9.5353 94.511 0.0 0.0 0.0 80.58311459537022 19.213476084830305 19.213476084830305 9.262137858390815 0 0.7614393726401688 2.0 0.4247425010840047 0.8441876774005248 YENEVA{I|L}R;YEGGEVA{I|L}R;YENE{I|L}G{I|L}R;YEGGE{I|L}G{I|L}R;YENE{I|L}RAV;YEGGE{I|L}RAV;Y[DG]AEVA{I|L}R;Y[DG]AE{I|L}G{I|L}R;Y{[CP]|[EA]}ATVA{I|L}R;Y[DG]AE{I|L}RAV 9.5353;8.6021;8.3991;7.4659;7.3308;6.3976;5.5723;4.4362;3.924;3.3679 -;-;-;-;-;-;-;-;-;- 326 + 1 2.028 86438.0 1.0 2582 4353 6933 HBL1_DMSO_200M_050219_2,6937 HBL1_DMSO_200M_050219_2,6937,YEKALPLC False False YENEVALR 37.270176 497.2532 2536359.75 6933.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 5.929864565531413 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6938 37.284 800.0 198250.0 25 0 12999.0 + -1 DAHRSHPFI 9 147 540.2752108748781 1078.535868816556 2 540.7740356326103 MULTI CID FTMS 0 0 0 6933 111904.71875 0.1169563103251005 -9 0.5703353881835938 5 Oxidation (M) _IPAYIEM(Oxidation (M))NI_ ENSG00000105669|ENST00000262812|COPE;nc|ENSG00000105669|O14579-3|COPE;ENST00000595984.5_1_19:19010490-19010792:-|nuORF;nc|ENSG00000105669|O14579-2|COPE;ENST00000598969.5_1_19:19010490-19016602:-|nuORF 32.30548876998284 0.1201446275138228 4 {I|L}[YV]DWWM 7 -1 29.429 0.0 0.0 2.7286 0.0 0.0 0.0 82.06695734195546 82.06695734195546 13.170284965696588 0.0 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 {I|L}[YV]DWWM 2.7286 - 1140 + 1 2.028 126528.4 0.7400000095367432 2583 4353 6933 HBL1_DMSO_200M_050219_2,6938 HBL1_DMSO_200M_050219_2,6938,IPAYIEMNI False False DAHRSHPFI 37.284009 540.2731 21761706.5 6933.0 ENSG00000105669|ENST00000262812|COPE;;nc|ENSG00000105669|O14579-3|COPE;;ENST00000595984.5_1_19:19010490-19010792:-|nuORF;;nc|ENSG00000105669|O14579-2|COPE;;ENST00000598969.5_1_19:19010490-19016602:-|nuORF 4.698919932047526 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6939 37.298 800.0 312640.0 25 0 15596.0 + 3784 DAHRSHPFI 9 201 360.51774177677737 1078.5313959305322 3 360.5173828005791 MULTI CID FTMS 0 0 0 6933 113256.46875 0.0859905603701824 -9 0.5703353881835938 6 Unmodified _DAHRSHPFI_ ENSG00000105669|ENST00000262812|COPE;ENST00000595984.5_1_19:19010490-19010792:-|nuORF;ENST00000598969.5_1_19:19010490-19016602:-|nuORF;nc|ENSG00000105669|O14579-2|COPE;nc|ENSG00000105669|O14579-3|COPE 27.628801355627647 0.1796483985696185 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WWSP{M(Oxidation (M))|F}{I|L} 8 4 + 44.314 0.0 0.0 4.1088 4.1088 79.259 0.0 0.0 0.0 11.245980483695767 9.419628234359578 9.419628234359578 9.961436392060286 0 0.5924778212679485 2.0 0.6505149978319906 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WWSP{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TEAASP{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ADP{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}[RH]HSP{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WP{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TE[QT]P{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}[RH]SHP{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]RWDP{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}V]AASP{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WP]ADP{M(Oxidation (M))|F}{I|L} 4.1088;3.1851;3.066;2.9799;2.7445;2.557;2.5518;2.1325;1.9008;1.6997 -;-;-;-;-;-;+;-;-;- + 486 1 2.028 203464.7 0.6100000143051147 2584 4353 6933 HBL1_DMSO_200M_050219_2,6939 HBL1_DMSO_200M_050219_2,6939,DAHRSHPFI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6941 37.302 49.0 1052800.0 25 0 180000.0 43014 VVYGIPYL 8 66 462.26348275175 922.5124125703 2 462.2633849978447 MULTI CID FTMS 0 0 0 6940 1353076.125 0.0462113385179105 7 -0.3156471252441406 1 Unmodified _VVYGIPYL_ ENSG00000142606|ENST00000378412|MMEL1;nc|ENSG00000142606|Q495T6-2|MMEL1;nc|ENSG00000142606|Q495T6-3|MMEL1 17.086550045450526 0.6584923310065985 4 VVYRYGGG 8 5 49.831 0.0 0.0 5.4016 0.0 0.0 0.0 68.05145441226796 68.05145441226796 36.11941264025134 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VVYRYGGG 5.4016 - 283 + 1 2.001 48402.9 1.0 2585 4354 6940 HBL1_DMSO_200M_050219_2,6941 HBL1_DMSO_200M_050219_2,6941,VVYGIPYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6942 37.304 36.0 1654100.0 25 0 180120.0 + -1 MPKLGKARLI 10 70 571.8571759380762 1141.6997989429524 2 571.8573486208916 MULTI CID FTMS 0 0 0 6940 1562419.625 0.6955714084743431 2 -0.086456298828125 2 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 14.838274106304384 0.5985701837916485 4 K{I|L}KQPE 6 -1 56.459 0.0 0.0 4.9451 0.0 0.0 400.2801991193375 0.0 400.2801991193375 0.0 50.97418457616534 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.3807196863200844 K{I|L}KQPE 4.9451 - 58 1 2.001 50375.2 1.0 2586 4354 6940 HBL1_DMSO_200M_050219_2,6942 HBL1_DMSO_200M_050219_2,6942,MPKLGKARLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6943 37.307 194.0 363590.0 25 0 47678.0 -1 VLFVEDGKME 10 75 591.7898531957247 1181.5651534582494 2 591.7894775271416 MULTI CID FTMS 0 0 0 6940 454843.53125 0.2951911383314 6 -0.2151870727539062 3 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 34.93206674587334 0.2110832994570416 4 [{M(Oxidation (M))|F}E]K[KA]VGK[{M(Oxidation (M))|F}E] 10 -1 [{M(Oxidation (M))|F}E]K[KA]V + + 39.297 -2.0952 -0.2983 3.3258 3.3258 46.722 0.0 0.0 0.0 0.0 28.45937593785709 0.0 0.0 0 1.5 0.0 1.110924374808178 0.0 [{M(Oxidation (M))|F}E]K[KA]VGK[{M(Oxidation (M))|F}E] 3.3258 - 261 + 1 2.001 58761.5 1.0 2587 4354 6940 HBL1_DMSO_200M_050219_2,6943 HBL1_DMSO_200M_050219_2,6943,VLFVEDGKME False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6944 37.318 643.0 228830.0 25 0 9868.7 + 2676 ATDPTIHTV 9 146 477.748403193477 953.482253453754 2 477.7481872439384 MULTI CID FTMS 0 0 0 6940 334918.28125 0.0346114639901791 8 -0.4129867553710937 4 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 81.61307344734483 0.0171259190214613 4 [TA]DPT{I|L}HTV 9 0 + 71.371 0.0 0.0 7.4853 7.4853 84.969 0.0 0.0 0.0 27.147642715192504 4.316648157921165 4.316648157921165 4.316648157921165 0 0.6694451763165201 2.0 1.5994850021680094 0.0 + + [TA]DPT{I|L}HTV;[TA]DPT{I|L}H{I|L}S;[TA]DPT{I|L}HS{I|L};[TA]A[KP]TPDGP;[TA]DPT[KP]QP;[TA]DPT[KP]AGP;[DP]TKKPDGP;[DP]KKTPDGP;[TA]{[ET]|[MV]}[VP]HTV;{[ES]|[DT]|[{I|L}C]}PKKPDGP 7.4853;7.0325;7.0071;4.4991;4.2295;4.0149;3.8001;3.7253;3.5632;3.2978 +;-;-;-;-;-;-;-;-;- + 914 + 1 2.001 115897.3 1.0 2588 4354 6940 HBL1_DMSO_200M_050219_2,6944 HBL1_DMSO_200M_050219_2,6944,ATDPTIHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6945 37.33 676.0 171110.0 25 0 33967.0 + 38168 TPPTAQVV 8 129 406.7294079739102 811.4442630146204 2 406.7291442751884 MULTI CID FTMS 0 0 0 6940 315368.40625 0.1826074228899969 8 -0.4129867553710937 5 Unmodified _TPPTAQVV_ ENSG00000116489|ENST00000263168|CAPZA1;ENST00000466066.1_1_1:113202257-113212751:+|nuORF 63.562846038646086 0.116059504757595 4 [TP]PATQVV 8 2 + 59.619 0.0 0.0 7.3473 7.3473 76.771 0.0 0.0 0.0 19.3931053707896 44.13479704297593 19.3931053707896 0.1230450566754512 0 0.8182503180159344 1.5228787452803376 1.1593793813122064 0.0 [TP]PATQVV;[TP]PTAQVV;[TP]PAQTVV;[TP]PAT[AG]VV;[TP]PTA[AG]VV;[TP]PA[AG]TVV;[TP][QA]PTVV;{[VA]|[{I|L}G]}[EP]AQVV;[AG]A[TP]PTVV;{[VA]|[{I|L}G]}[EP]A[AG]VV 7.3473;7.3321;6.4214;6.2059;6.1907;5.2799;4.04;2.9482;2.4853;1.8068 -;+;-;-;-;-;-;-;-;- + 275 1 2.001 95523.4 1.0 2589 4354 6940 HBL1_DMSO_200M_050219_2,6945 HBL1_DMSO_200M_050219_2,6945,TPPTAQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6947 37.346 800.0 423560.0 25 0 25808.0 + 4534 DAYPKNPHL 9 261 352.18248582592616 1053.5256280779786 3 352.1817199587822 MULTI CID FTMS 0 0 0 6946 244782.40625 0.4716587025587228 -5 0.2229804992675781 1 Unmodified _DAYPKNPHL_ ENSG00000099940|ENST00000215730|SNAP29 34.10243960390752 0.1078313939113124 4 {[DA]|[EG]}YPKNPH{I|L} 9 0 + 60.974 0.0 0.0 5.7877 5.7877 78.785 0.0 0.0 0.0 44.99294240473753 1.2245861636305904 1.2245861636305904 4.168253528324108 0 0.2887254899964357 1.6989700043360187 0.0 0.3807196863200844 + + {[DA]|[EG]}YPKNPH{I|L};{[DA]|[EG]}YPKNP{I|L}H;{[DA]|[EG]}YPKKW{M(Oxidation (M))|F};{[DA]|[EG]}YPKK{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V;{[DA]|[EG]}YPKGGPH{I|L};{[DA]|[EG]}YPKGGP{I|L}H;{[DA]|[EG]}YPKN[H{I|L}]P;WYPK{I|L}ANY;WYPKKDA{M(Oxidation (M))|F};WYPKK{M(Oxidation (M))|F}AD 5.7877;5.392;5.3457;5.0701;4.9136;4.518;4.15;3.631;3.5645;3.511 +;-;-;-;-;-;-;-;-;- + 574 + 1 2.001 270252.1 0.8199999928474426 2590 4355 6946 HBL1_DMSO_200M_050219_2,6947 HBL1_DMSO_200M_050219_2,6947,DAYPKNPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6948 37.357 616.0 232720.0 25 0 18311.0 31445 RPQSNWKESAN 11 129 658.8204817528074 1315.626410572415 2 658.8204223513603 MULTI CID FTMS 0 0 0 6946 327209.46875 0.4278789230532469 -4 0.1779098510742187 2 Unmodified _RPQSNWKESAN_ ENSG00000197077|ENST00000358431|KIAA1671 33.4449034751529 0.3133739643825231 4 DPS[WK]PSQSAN 11 6 97.05 0.0 0.0 7.3767 0.0 0.0 100.06430251289218 0.0 100.06430251289218 0.0 54.90981414994207 0.0 0.0 0 2.1747425010840047 0.0 3.385151878060192 0.3807196863200844 DPS[WK]PSQSAN 7.3767 - 2599 1 2.001 106661.2 1.0 2591 4355 6946 HBL1_DMSO_200M_050219_2,6948 HBL1_DMSO_200M_050219_2,6948,RPQSNWKESAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6949 37.37 800.0 258770.0 25 0 26900.0 + 3839 DAIVVRKM 8 165 466.273176089541 930.531799245882 2 466.2735168337822 MULTI CID FTMS 0 0 0 6946 190591.8125 0.5821345953918219 -3 0.1365203857421875 3 Unmodified _DAIVVRKM_ ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;nc|ENSG00000068878|Q14997-3|PSME4 46.020951573049366 0.1579632664462935 4 DA{I|L}VVRKM 8 0 + 78.371 0.0 0.0 8.4222 8.4222 94.223 0.0 0.0 0.0 26.40978057358332 11.234943439647012 11.234943439647012 11.234943439647012 0 1.25 2.0 0.0 0.5796896906561032 + + DA{I|L}VVRKM;DA{I|L}VV[KT]SV;DA{I|L}V[{I|L}T][KA]T 8.4222;7.2148;6.6817 +;-;- + 454 + 1 2.001 160414.5 0.9700000286102296 2592 4355 6946 HBL1_DMSO_200M_050219_2,6949 HBL1_DMSO_200M_050219_2,6949,DAIVVRKM False True DAIVVRKM 37.370484 466.273516833782 1255781.375 6946.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4;;nc|ENSG00000068878|Q14997-3|PSME4 4.102117617925008 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6950 37.384 800.0 224170.0 25 0 32480.0 + 4536 DAYPKNPHL 9 155 527.7693613553644 1053.5241697775286 2 527.7692138552666 MULTI CID FTMS 0 0 0 6946 108794.1875 0.3887221238653477 -4 0.1779098510742187 4 Unmodified _DAYPKNPHL_ ENSG00000099940|ENST00000215730|SNAP29 69.10491478415734 0.0214449631113747 4 {[DA]|[EG]}YPKNPH{I|L} 9 0 + 73.998 0.0 0.0 7.0238 7.0238 91.177 0.0 0.0 0.0 46.88477471662273 12.22357194224834 12.22357194224834 11.267711195242768 0 2.0114393726401687 1.5228787452803376 0.0 0.5501648626366046 + + {[DA]|[EG]}YPKNPH{I|L};{[DA]|[EG]}Y{I|L}[EP]PH{I|L};{[DA]|[EG]}YPKGGPH{I|L};{[DA]|[EG]}YPKN[H{I|L}]P;[KP]NPHDPH{I|L};{[DA]|[EG]}Y{I|L}[EP][H{I|L}]P;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}[EP]PH{I|L};{[DA]|[EG]}YPKGG[H{I|L}]P;{I|L}[MT][QT]NPH{I|L};{[DA]|[EG]}YPK[HV]QP 7.0238;5.9543;5.8757;4.4982;3.9899;3.4287;3.3876;3.3501;3.3206;3.2403 +;-;-;-;-;-;-;-;-;- + 1442 + 1 2.001 138595.7 0.8399999737739563 2593 4355 6946 HBL1_DMSO_200M_050219_2,6950 HBL1_DMSO_200M_050219_2,6950,DAYPKNPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6952 37.388 21.0 1424800.0 25 0 69850.0 + 26606 NVPWTRTI 8 67 493.7726739544863 985.5307949757728 2 493.7725402712822 MULTI CID FTMS 0 0 0 6951 2600022.0 0.0835034970326319 7 -0.4376869201660156 1 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 18.13498045792455 0.6430038125133779 4 WT{I|L} 3 -1 25.662 0.0 0.0 2.6039 0.0 0.0 567.3164833076071 0.0 567.3164833076071 0.0 15.344406447039065 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 WT{I|L} 2.6039 - 101 + 1 1.976 28608.0 1.0 2594 4356 6951 HBL1_DMSO_200M_050219_2,6952 HBL1_DMSO_200M_050219_2,6952,NVPWTRTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6953 37.39 72.0 639000.0 25 0 115280.0 + 23804 LVDSNNPKI 9 56 500.27723412962 998.53991532604 2 500.2776367068291 MULTI CID FTMS 0 0 0 6951 904594.5625 0.9495744813183272 -2 0.086456298828125 2 Unmodified _LVDSNNPKI_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928-2|POLR2A;nc|ENSG00000181222|P24928|POLR2A 21.53697664764585 0.2571576504437394 4 {I|L}VDSNN 6 3 63.193 0.0 0.0 6.3285 0.0 0.0 0.0 353.2204125457847 353.2204125457847 51.510234424404686 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}VDSNN 6.3285 + + 126 + 1 1.976 42031.4 1.0 2595 4356 6951 HBL1_DMSO_200M_050219_2,6953 HBL1_DMSO_200M_050219_2,6953,LVDSNNPKI False True LVDSNNPKI 37.390104 500.277636706829 39029574.0 6951.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A;;nc|ENSG00000181222|P24928-2|POLR2A 5.639695803324382 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6955 37.394 20.0 2499200.0 25 0 304980.0 26918 PDPSRSIF 8 70 459.7377035282235 917.460854123247 2 459.7375060915947 MULTI CID FTMS 0 0 0 6954 1642167.125 0.1672412368196357 49 -2.408344268798828 1 Unmodified _PDPSRSIF_ ENSG00000136193|ENST00000242059|SCRN1;nc|ENSG00000136193|Q12765-2|SCRN1;nc|ENSG00000136193|Q12765-3|SCRN1 15.847184025352805 0.6768015514314958 4 [DP]P 3 5 38.072 0.0 0.0 4.1497 0.0 0.0 0.0 605.3032930963499 605.3032930963499 27.58741856696816 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 + [DP]P 4.1497 + + 93 + 1 1.976 45981.1 1.0 2596 4357 6954 HBL1_DMSO_200M_050219_2,6955 HBL1_DMSO_200M_050219_2,6955,PDPSRSIF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6956 37.398 179.0 476420.0 25 0 74857.0 22075 LPPPTARV 8 68 425.7610386944438 849.5075244556876 2 425.7610961794853 MULTI CID FTMS 0 0 0 6954 655292.0625 0.6318688805567851 10 -0.7048721313476562 2 Unmodified _LPPPTARV_ ENST00000511502.5_1_1:1563180-1563657:+|nuORF 25.399314129420983 0.5099049743284904 4 {I|L}PPP 4 4 57.423 0.0 0.0 6.7595 0.0 0.0 0.0 442.2436922662719 442.2436922662719 49.49092531119419 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + {I|L}PPP 6.7595 + + 75 + 1 1.976 70856.6 1.0 2597 4357 6954 HBL1_DMSO_200M_050219_2,6956 HBL1_DMSO_200M_050219_2,6956,LPPPTARV False True PLPPTIGR 37.397704 425.761096179485 40738548.0 6954.0 ENST00000539759.5_1_11:47639025-47663996:-|nuORF;;ENSG00000109919|ENST00000302503|MTCH2 1.9501733779907229 2.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6958 37.404 256.0 635080.0 25 0 72841.0 + 25291 NAAILKKV 8 119 428.7848250011946 855.5550970691893 2 428.7851135134697 MULTI CID FTMS 0 0 0 6957 562484.75 1.0 0 0.0 1 Unmodified _NAAILKKV_ ENSG00000113558|ENST00000353411|SKP1;nc|ENSG00000113558|P63208-2|SKP1 46.020951573049366 0.1579632664462935 4 NAA{I|L}{I|L}KKV 8 0 + 76.164 0.0 0.0 8.9023 8.9023 98.88 0.0 0.0 0.0 63.10148488977264 8.679601765309314 8.679601765309314 76.16402076587934 0 1.110924374808178 2.0 0.0 0.1747425010840047 + + NAA{I|L}{I|L}KKV 8.9023 + + 150 + 1 1.976 131653.1 1.0 2598 4358 6957 HBL1_DMSO_200M_050219_2,6958 HBL1_DMSO_200M_050219_2,6958,NAAILKKV False True NAAILKKV 37.404337 428.78511351347 2978023.5 6957.0 nc|ENSG00000113558|P63208-2|SKP1;;ENSG00000113558|ENST00000353411|SKP1 3.540783246358236 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6959 37.408 176.0 704640.0 25 0 98126.0 + 22588 LPYDSKHQI 9 116 367.53021174267633 1099.568805828229 3 367.5291931033134 MULTI CID FTMS 0 0 0 6957 627605.1875 0.1403317327762445 -3 0.0675086975097656 2 Unmodified _LPYDSKHQI_ ENSG00000134242|ENST00000359785|PTPN22;ENST00000484147.5_1_1:114375712-114414257:-|nuORF;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;nc|ENSG00000134242|Q9Y2R2-6|PTPN22;nc|ENSG00000134242|Q9Y2R2|PTPN22 32.78568957990786 0.1150597335874693 4 {I|L}PYD{I|L}MK 7 5 59.399 0.0 0.0 5.402 0.0 0.0 0.0 236.1047762506469 236.1047762506469 30.93881719685367 0.0 0.0 0.0 0 0.5356668758921829 1.3010299956639813 0.0 0.8494850021680094 {I|L}PYD{I|L}MK 5.402 - 932 + 1 1.976 108360.9 1.0 2599 4358 6957 HBL1_DMSO_200M_050219_2,6959 HBL1_DMSO_200M_050219_2,6959,LPYDSKHQI True True LPYDSKHQI 37.407758 367.529193103313 82456352.0 6957.0 ENSG00000134242|ENST00000359785|PTPN22;;nc|ENSG00000134242|Q9Y2R2-6|PTPN22;;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;;nc|ENSG00000134242|Q9Y2R2|PTPN22;;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;;ENST00000484147.5_1_1:114375712-114414257:-|nuORF 7.000712076822917 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6960 37.412 242.0 271630.0 25 0 45219.0 + 32294 RWPKKSAEF 9 76 574.8141299707913 1147.6137070083826 2 574.8138305544853 MULTI CID FTMS 0 0 0 6957 354869.15625 0.9670355189581596 -4 0.0998573303222656 3 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 38.61474834105838 0.0830609365873449 4 [WR][KP]KSAE{M(Oxidation (M))|F} 9 0 + 59.103 0.0 0.0 5.1501 5.1501 76.488 0.0 0.0 0.0 4.628618393527404 49.43697499232712 4.628618393527404 4.431890546242343 0 0.9916440611282624 0.0 0.3807196863200844 0.3494850021680094 + + [WR][KP]KSAE{M(Oxidation (M))|F};[WR][KP]KSA{M(Oxidation (M))|F}E;[KP][WR]KSAE{M(Oxidation (M))|F};[KP][WR]KSA{M(Oxidation (M))|F}E;[VG]W[KP]CRR{M(Oxidation (M))|F};[WR][KP]K{[WT]|[RM]}{M(Oxidation (M))|F};[KP][WR]K{[WT]|[RM]}{M(Oxidation (M))|F} 5.1501;4.7639;4.1252;3.7391;3.2976;3.214;2.1892 +;-;-;-;-;-;- + 92 1 1.976 58085.8 1.0 2600 4358 6957 HBL1_DMSO_200M_050219_2,6960 HBL1_DMSO_200M_050219_2,6960,RWPKKSAEF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6961 37.423 602.0 347630.0 25 0 34686.0 + 22589 LPYDSKHQI 9 145 550.7908807850292 1099.5672086368584 2 550.7908813357353 MULTI CID FTMS 0 0 0 6957 332450.0 0.0999266743504052 -3 0.0675086975097656 4 Unmodified _LPYDSKHQI_ ENSG00000134242|ENST00000359785|PTPN22;ENST00000484147.5_1_1:114375712-114414257:-|nuORF;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;nc|ENSG00000134242|Q9Y2R2-6|PTPN22;nc|ENSG00000134242|Q9Y2R2|PTPN22 92.65332237495696 0.0139087009896299 4 {I|L}PYDSKH{I|L}Q 9 2 + 96.75 0.0 0.0 8.7989 8.7989 84.453 0.0 0.0 0.0 25.8540325403023 2.8082660957569487 2.8082660957569487 2.8082660957569487 0 1.2544321917401078 2.0 0.5866968715561641 1.316901560044258 {I|L}PYDSKH{I|L}Q;{I|L}PYDSKHQ{I|L};{I|L}PYDSK{I|L}HQ;{I|L}PYDSKH[AG]{I|L};{I|L}PW{I|L}KSDNQ;{I|L}P{I|L}WKSDNQ;{I|L}P{I|L}EY[R{M(Oxidation (M))|F}]Y;{I|L}PY{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]Y;{I|L}PWKSDN{I|L}Q;{I|L}PWKS{I|L}DNQ 8.7989;8.5435;8.3429;7.4103;6.8083;6.6278;6.5641;6.291;6.1651;6.1222 -;+;-;-;-;-;-;-;-;- + 5185 + 1 1.976 167909.1 1.0 2601 4358 6957 HBL1_DMSO_200M_050219_2,6961 HBL1_DMSO_200M_050219_2,6961,LPYDSKHQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6962 37.437 800.0 191680.0 25 0 19186.0 -1 YVCTMDGNL 9 164 544.7229188457202 1087.4312847582405 2 544.7230102419853 MULTI CID FTMS 0 0 0 6957 171407.15625 0.1342532557649781 -4 0.0998573303222656 5 Carbamidomethyl (C),Oxidation (M) _YVC(Carbamidomethyl (C))TM(Oxidation (M))DGNL_ ENST00000572259.1_1_17:578096-579572:-|nuORF 18.13498045792455 0.3457906370836843 4 [YV]QG 4 -1 33.544 0.0 0.0 3.0847 0.0 0.0 0.0 637.2009981744749 637.2009981744749 16.165579780723842 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.4247425010840047 [YV]QG 3.0847 - 516 + 1 1.976 118991.8 0.949999988079071 2602 4358 6957 HBL1_DMSO_200M_050219_2,6962 HBL1_DMSO_200M_050219_2,6962,YVCTMDGNL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6964 37.442 188.0 378550.0 25 0 37639.0 -1 AIHNICSV 8 95 457.2301337914486 912.4457146496972 2 457.2317382693291 MULTI CID FTMS 0 0 0 6963 242424.34375 0.5938952856333543 5 -0.5159187316894531 1 Carbamidomethyl (C) _AIHNIC(Carbamidomethyl (C))SV_ ENSG00000064419|ENST00000265388|TNPO3;nc|ENSG00000064419|Q9Y5L0-1|TNPO3;nc|ENSG00000064419|Q9Y5L0-3|TNPO3 14.581692164780916 0.6954967302934248 4 [HA]{M(Oxidation (M))|F}Q[QP][VS] 8 -1 + 17.162 0.0 0.0 1.8809 1.8809 66.295 0.0 0.0 0.0 0.439482365052207 -2.082887833543545 -2.082887833543545 3.4295419826573745 0 0.4247425010840047 1.0457574905606752 0.0 0.2614393726401688 [HA]{M(Oxidation (M))|F}Q[QP][VS];[{I|L}A]{NN|[MP]|[D{I|L}]|[EV]}KN[HC];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VP]VV[HC];[HA]{M(Oxidation (M))|F}[AG][QP][VS];[{I|L}A]{NN|[MP]|[D{I|L}]|[EV]}KGG[HC];[VS]Q{I|L}{I|L}N[HC] 1.8809;1.5051;1.0033;0.57931;0.48998;0.44438 -;-;-;-;-;- 158 1 1.976 62528.8 1.0 2603 4359 6963 HBL1_DMSO_200M_050219_2,6964 HBL1_DMSO_200M_050219_2,6964,AIHNICSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6965 37.456 800.0 89644.0 25 0 23227.0 -1 0 38 1129.125241517038 3384.3538951513137 3 1129.796435534954 MULTI CID FTMS 0 0 0 6963 233514.875 0.2973894199309696 -2 0.0465621948242187 2 4 {M(Oxidation (M))|F}YC(Carbamidomethyl (C)) 3 -1 11.682 0.0 0.0 0.34519 0.0 0.0 1310.4598044304137 1600.6994112604127 2911.1592156908264 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}YC(Carbamidomethyl (C)) 0.34519 - 21 + 1 1.976 65809.7 0.6700000166893005 2604 4359 6963 HBL1_DMSO_200M_050219_2,6965 HBL1_DMSO_200M_050219_2,6965, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6966 37.458 111.0 474940.0 25 0 43721.0 + 25384 NAYTSSQI 8 88 442.2117013715476 882.4088498098953 2 442.2116271853447 MULTI CID FTMS 0 0 0 6963 610082.9375 0.943461934069868 -1 0.0389747619628906 3 Unmodified _NAYTSSQI_ ENSG00000157456|ENST00000288207|CCNB2 18.13498045792455 0.6430038125133779 4 {[QG]|[NA]}YT 4 4 26.26 0.0 0.0 2.9759 0.0 0.0 0.0 430.19315702108594 430.19315702108594 11.655462488490684 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.2614393726401688 + {[QG]|[NA]}YT 2.9759 + + 101 1 1.976 46682.1 1.0 2605 4359 6963 HBL1_DMSO_200M_050219_2,6966 HBL1_DMSO_200M_050219_2,6966,NAYTSSQI False True NAYTSSQI 37.458385 442.211627185345 4780286.5 6963.0 ENSG00000157456|ENST00000288207|CCNB2 2.551037391026815 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6967 37.471 752.0 160960.0 25 0 7041.4 + 30290 QYQANANQL 9 150 525.2531967833494 1048.491840633499 2 525.2533447146416 MULTI CID FTMS 0 0 0 6963 228690.890625 0.5675635273170216 -2 0.0465621948242187 4 Unmodified _QYQANANQL_ ENSG00000089177|ENST00000354981|KIF16B;nc|ENSG00000089177|Q96L93-2|KIF16B;nc|ENSG00000089177|Q96L93-4|KIF16B;nc|ENSG00000089177|Q96L93-5|KIF16B;nc|ENSG00000089177|Q96L93-6|KIF16B 67.34385681178166 0.0221257235307089 4 [YQ]QANAN{I|L}Q 9 2 + 50.676 0.0 0.0 4.8332 4.8332 76.1 0.0 0.0 0.0 5.241049764686139 6.769083242921923 5.241049764686139 5.241049764686139 0 0.468765315847925 1.0457574905606752 0.0 1.9489700043360187 [YQ]QANAN{I|L}Q;[AG]YQANAN{I|L}Q;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NANAC(Carbamidomethyl (C)){I|L}Q;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NANAQC(Carbamidomethyl (C)){I|L};{[CA]|SS}[KA]ANAC(Carbamidomethyl (C)){I|L}Q;{[QN]|[E{I|L}]|[KN]}AA[YG]AN{I|L}Q;{[QN]|[E{I|L}]|[KN]}A[YQ]AN{I|L}Q;[YQ]QANAGG{I|L}Q;[YQ][AG]ANAN{I|L}Q;[YQ]QAGGAN{I|L}Q 4.8332;4.3333;4.1771;4.1247;3.9911;3.9869;3.9638;3.955;3.955;3.955 -;-;-;-;-;-;-;-;-;- 3034 1 1.976 97522.5 1.0 2606 4359 6963 HBL1_DMSO_200M_050219_2,6967 HBL1_DMSO_200M_050219_2,6967,QYQANANQL True True QYQANANQL 37.471425 525.253344714642 2668915.0 6963.0 ENSG00000089177|ENST00000354981|KIF16B;;nc|ENSG00000089177|Q96L93-4|KIF16B;;nc|ENSG00000089177|Q96L93-6|KIF16B;;nc|ENSG00000089177|Q96L93-2|KIF16B;;nc|ENSG00000089177|Q96L93-5|KIF16B 6.667440414428711 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6968 37.485 800.0 140390.0 25 0 18980.0 + 45973 YYYYHRQY 8 94 628.2797838350153 1254.5450147368306 2 628.2805663943291 MULTI CID FTMS 0 0 0 6963 133942.453125 0.7883152857620002 3 -0.2741546630859375 5 Unmodified _YYYYHRQY_ ENSG00000140990|ENST00000268668|NDUFB10;ENST00000565031.1_1_16:2009625-2011290:+|nuORF;nc|ENSG00000140990|O96000-2|NDUFB10 86.12129899796855 0.0650563179454676 4 YYYYHY{[{M(Oxidation (M))|F}H]|[RQ]} 8 2 + 90.728 0.0 0.0 7.232 7.232 92.142 0.0 0.0 0.0 36.40978057358331 14.432316212977142 14.432316212977142 12.4296799943576 0 1.2302046884880935 2.0 0.0 1.426935982160881 YYYYHY{[{M(Oxidation (M))|F}H]|[RQ]};YYYHYY{[{M(Oxidation (M))|F}H]|[RQ]};YYYY[Y{I|L}]NPP;YYY{I|L}YD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}P;YYYY[Y{I|L}]GGPP 7.232;6.2412;6.0815;4.9715;4.4403 -;-;-;-;- 352 + 1 1.976 89182.9 0.8999999761581421 2607 4359 6963 HBL1_DMSO_200M_050219_2,6968 HBL1_DMSO_200M_050219_2,6968,YYYYHRQY True True YYYYHRQY 37.485262 628.280566394329 1230360.875 6963.0 nc|ENSG00000140990|O96000-2|NDUFB10;;ENST00000565031.1_1_16:2009625-2011290:+|nuORF;;ENSG00000140990|ENST00000268668|NDUFB10 4.716126521428426 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6969 37.499 800.0 235610.0 25 0 19603.0 + 2302 AQIEAQNRL 9 178 521.7861913325532 0 521.7861205935478 PEAK CID FTMS 0 0 0 6963 120561.3125 0.5576157687429868 -1 0.0389747619628906 6 Unmodified _AQIEAQNRL_ ENSG00000157823|ENST00000336418|AP3S2;nc|ENSG00000242498|Q7Z6K5-2|ARPIN 60.07390631473393 0.0167981024283326 4 {I|L}EAQ[KG]Q 7 5 53.364 0.0 0.0 5.1235 0.0 0.0 199.0949521467723 85.04154382877186 284.13649597554416 0.0 0.0 0.0 0.0 0 1.960409376976188 0.0 0.4247425010840047 1.6237125054200234 {I|L}EAQ[KG]Q 5.1235 - 412 + 1 1.976 147350.4 0.8500000238418579 2608 4359 6963 HBL1_DMSO_200M_050219_2,6969 HBL1_DMSO_200M_050219_2,6969,AQIEAQNRL True True AQIEAQNRL 37.499093 521.786120593548 1598654.75 6963.0 ENSG00000157823|ENST00000336418|AP3S2;;nc|ENSG00000242498|Q7Z6K5-2|ARPIN 4.759958028793335 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6970 37.513 800.0 143760.0 25 0 8421.2 + 21832 LPNPTKPNNV 10 134 547.303947912225 1092.59334289125 2 547.3027221560478 MULTI CID FTMS 0 0 0 6963 128175.6171875 0.4778293480822553 -15 0.7858352661132812 7 Unmodified _LPNPTKPNNV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 51.41523569358685 0.0718446036348414 4 {I|L}PNPTK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}P 9 4 71.908 0.0 0.0 6.5814 0.0 0.0 0.0 83.0259035699828 83.0259035699828 61.19456889533673 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.3054621874040891 0.6747425010840047 {I|L}PNPTK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}P 6.5814 - 956 + 1 1.976 93680.5 0.8600000143051147 2609 4359 6963 HBL1_DMSO_200M_050219_2,6970 HBL1_DMSO_200M_050219_2,6970,LPNPTKPNNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6972 37.517 16.0 3308200.0 25 0 453870.0 + -1 PQMLLKLRK 9 66 381.5741944535738 1141.7007539609217 3 381.5740539431572 MULTI CID FTMS 0 0 0 6971 2783700.0 0.1350090617139385 8 -0.6554069519042969 1 Oxidation (M) _PQM(Oxidation (M))LLKLRK_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 4.897010918128616 0.7437319958283661 4 K{I|L}K[QP]E 6 -1 24.526 0.0 0.0 2.1482 0.0 0.0 400.2809315412125 0.0 400.2809315412125 0.0 14.248032187880124 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.1482 - 35 1 1.959 48334.9 1.0 2610 4360 6971 HBL1_DMSO_200M_050219_2,6972 HBL1_DMSO_200M_050219_2,6972,PQMLLKLRK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 6973 37.518 29.0 2437500.0 25 0 223630.0 + 22221 LPRDRQALV 9 66 356.5490876363513 1066.625433509254 3 356.5488159060478 MULTI CID FTMS 0 0 0 6971 1867993.25 0.573406504319596 4 -0.4395637512207031 2 Unmodified _LPRDRQALV_ ENSG00000112576|ENST00000372991|CCND3;ENST00000505672.5_1_6:41904922-42016364:-|nuORF;ENST00000505884.5_1_6:41904922-41997824:-|nuORF;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;ENST00000511161.5_1_6:41904922-42016364:-|nuORF;ENST00000513956.5_1_6:41904284-42016364:-|nuORF;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3 10.799506525563784 0.5443532743200366 4 A{I|L}V 3 6 22.92 0.0 0.0 2.1488 0.0 0.0 765.4248460728713 0.0 765.4248460728713 0.0 15.929862658764264 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + A{I|L}V 2.1488 + + 6 1 1.959 63925.2 1.0 2611 4360 6971 HBL1_DMSO_200M_050219_2,6973 HBL1_DMSO_200M_050219_2,6973,LPRDRQALV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6974 37.52 29.0 1896200.0 25 0 242340.0 + 32287 RWPKKSAEF 9 90 383.5453438582354 1147.6142021749065 3 383.5450927615166 MULTI CID FTMS 0 0 0 6971 1753241.125 0.8662563467216916 -2 0.1153297424316406 3 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 18.1463463914782 0.3454829746528889 4 [WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F} 9 0 + 46.871 0.0 0.0 4.0842 4.0842 74.595 0.0 0.0 0.0 16.917629994555128 36.413187455970544 16.917629994555128 6.478174818886373 0 0.4247425010840047 1.3979400086720375 0.0 0.25 + + [WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F};[WR][KP]K{[WT]|[RM]}{M(Oxidation (M))|F} 4.0842;3.5197 +;- + 130 1 1.959 48096.8 1.0 2612 4360 6971 HBL1_DMSO_200M_050219_2,6974 HBL1_DMSO_200M_050219_2,6974,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6975 37.523 180.0 422280.0 25 0 51372.0 + 6810 EEAPSRPAL 9 81 485.2538040177107 968.4930551022214 2 485.2539245486259 MULTI CID FTMS 0 0 0 6971 464950.65625 0.0478242547007488 -3 0.1229171752929687 4 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 49.93300154707207 0.0405168250806675 4 EEAPSR[PA]{I|L} 9 0 + 49.649 0.0 0.0 5.1264 5.1264 78.415 0.0 0.0 0.0 32.50894362433556 3.300756084811809 3.300756084811809 6.197887582883936 0 0.7302046884880937 1.5228787452803376 0.3807196863200844 0.0 + + EEAPSR[PA]{I|L};EEAPSR[{I|L}A]P;EE{I|L}{I|L}{[ET]|[MV]}[HV];[PS]R[SG]{I|L}{I|L}[HC] 5.1264;4.4865;1.1333;0.39866 +;-;-;- + 133 + 1 1.959 64513.6 1.0 2613 4360 6971 HBL1_DMSO_200M_050219_2,6975 HBL1_DMSO_200M_050219_2,6975,EEAPSRPAL True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 6976 37.533 580.0 390190.0 25 0 126000.0 + 22220 LPRDRQALV 9 140 534.3200628330959 1066.6255727329917 2 534.3201171755791 MULTI CID FTMS 0 0 0 6971 380698.3125 0.4979416245221315 1 -0.1004600524902343 5 Unmodified _LPRDRQALV_ ENSG00000112576|ENST00000372991|CCND3;ENST00000505672.5_1_6:41904922-42016364:-|nuORF;ENST00000505884.5_1_6:41904922-41997824:-|nuORF;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;ENST00000511161.5_1_6:41904922-42016364:-|nuORF;ENST00000513956.5_1_6:41904284-42016364:-|nuORF;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3 63.960520009940105 0.0238892913700936 4 [{I|L}P]RDR[QA]{I|L}V 9 0 + 42.824 0.0 0.0 4.0149 4.0149 81.744 0.0 0.0 0.0 10.379099962974152 25.33313692172342 10.379099962974152 23.844793210667486 0 1.7302046884880935 1.2218487496163564 0.0 0.805462187404089 + + [{I|L}P]RDR[QA]{I|L}V;[DP][R{I|L}]R[QA]{I|L}V;[{I|L}P][WQ]{I|L}[QA]{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}R[{M(Oxidation (M))|F}T][{I|L}T]{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}V;[{M(Oxidation (M))|F}T][Y{I|L}]RR{I|L}V 4.0149;1.7794;1.7266;0.86331;0.76715;0.44733 +;-;-;-;-;- + 428 1 1.959 178841.4 1.0 2614 4360 6971 HBL1_DMSO_200M_050219_2,6976 HBL1_DMSO_200M_050219_2,6976,LPRDRQALV True True LPRDRQALV 37.533172 534.320117175579 57589383.0 6971.0 ENST00000513956.5_1_6:41904284-42016364:-|nuORF;;nc|ENSG00000112576|P30281-2|CCND3;;ENST00000505884.5_1_6:41904922-41997824:-|nuORF;;ENSG00000112576|ENST00000372991|CCND3;;ENST00000505672.5_1_6:41904922-42016364:-|nuORF;;ENST00000511161.5_1_6:41904922-42016364:-|nuORF;;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;;nc|ENSG00000112576|P30281-3|CCND3 7.41724173227946 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6977 37.539 293.0 428120.0 25 0 43749.0 + 3873 DAKSTSIQV 9 123 474.7535597060666 947.4925664789332 2 474.7529479861259 MULTI CID FTMS 0 0 0 6971 313583.28125 0.3354117747334749 -2 0.1153297424316406 6 Unmodified _DAKSTSIQV_ ENSG00000076242|ENST00000231790|MLH1;ENST00000435176.5_1_3:37035370-37045944:+|nuORF;ENST00000454028.5_1_3:37035144-37045944:+|nuORF;ENST00000458205.6_1_3:37035370-37038667:+|nuORF;ENST00000466900.5_1_3:37035370-37047454:+|nuORF;ENST00000539477.5_1_3:37035370-37053334:+|nuORF 56.17704186161178 0.0281986971544335 4 [AG]VSS{[MG]|[TS]}{I|L}N{I|L} 10 5 + 43.082 0.0 0.0 4.5469 4.5469 67.526 0.0 0.0 0.0 0.8111574582482461 7.001962355242952 0.8111574582482461 0.8111574582482461 0 0.3539171939081173 1.6989700043360187 1.610924374808178 0.0 [AG]VSS{[MG]|[TS]}{I|L}N{I|L};{[DA]|[EG]}KS{[MG]|[TS]}{I|L}N{I|L};{[TV]|[{I|L}S]}NS{[MG]|[TS]}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[{M(Oxidation (M))|F}V]{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}SS{[MG]|[TS]}{I|L}N{I|L};{[VA]|[{I|L}G]}GSS{[MG]|[TS]}{I|L}N{I|L};{[TV]|[{I|L}S]}GGS{[MG]|[TS]}{I|L}N{I|L};{[SA]|[TG]}[VG]S{[MG]|[TS]}{I|L}N{I|L};[R{M(Oxidation (M))|F}]Q{I|L}{[SA]|[TG]}QV;[R{M(Oxidation (M))|F}]QKAAEV 4.5469;4.4613;3.8886;3.5451;3.4914;3.3189;2.9168;2.1163;1.9637;1.619 -;-;-;-;-;-;-;-;-;- 842 1 1.959 103129.1 1.0 2615 4360 6971 HBL1_DMSO_200M_050219_2,6977 HBL1_DMSO_200M_050219_2,6977,DAKSTSIQV True True DAKSTSIQV 37.538528 474.752947986126 13794197.0 6971.0 ENST00000466900.5_1_3:37035370-37047454:+|nuORF;;ENST00000539477.5_1_3:37035370-37053334:+|nuORF;;ENST00000458205.6_1_3:37035370-37038667:+|nuORF;;ENST00000454028.5_1_3:37035144-37045944:+|nuORF;;ENST00000435176.5_1_3:37035370-37045944:+|nuORF;;ENSG00000076242|ENST00000231790|MLH1 6.245188236236572 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6978 37.543 212.0 344820.0 25 0 20090.0 + 26300 NQWDGTQHGV 10 93 571.2542480962039 1140.4939432592078 2 571.2544433474541 MULTI CID FTMS 0 0 0 6971 302315.59375 0.6911761133580099 4 -0.4395637512207031 7 Unmodified _NQWDGTQHGV_ ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;nc|ENSG00000152818|P46939-4|UTRN 57.72198328787511 0.0425618229276495 4 KQTGDW[HS] 8 7 47.185 0.0 0.0 4.1372 0.0 0.0 183.0649128644547 0.0 183.0649128644547 0.0 32.40350443602328 0.0 0.0 0 1.0 0.0 1.0228787452803376 0.75 KQTGDW[HS] 4.1372 - 277 1 1.959 59792.2 1.0 2616 4360 6971 HBL1_DMSO_200M_050219_2,6978 HBL1_DMSO_200M_050219_2,6978,NQWDGTQHGV True True NQWDGTQHGV 37.542566 571.254443347454 3145909.5 6971.0 nc|ENSG00000152818|P46939-2|UTRN;;nc|ENSG00000152818|P46939-4|UTRN;;ENSG00000152818|ENST00000367545|UTRN 9.740970929463703 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6979 37.556 800.0 108710.0 25 0 18046.0 -1 0 54 1141.7942847771617 3422.3610249316844 3 1142.464648425579 MULTI CID FTMS 0 0 0 6971 177886.359375 1.0 0 0.0 8 4 EN 2 -1 9.464 0.0 0.0 0.27653 0.0 0.0 2766.1321563787537 410.1232699029906 3176.2554262817443 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EN 0.27653 - 38 + 1 1.959 71842.4 0.6499999761581421 2617 4360 6971 HBL1_DMSO_200M_050219_2,6979 HBL1_DMSO_200M_050219_2,6979, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6980 37.57 800.0 123570.0 25 0 23819.0 -1 0 79 896.8833140902706 1791.752075247341 2 896.8840820193291 MULTI CID FTMS 0 0 0 6971 139367.125 1.0 0 0.0 9 4 {[QG]|[NA]}STGV 6 -1 14.574 0.0 0.0 0.81338 0.0 0.0 0.0 1259.4787639573703 1259.4787639573703 3.604699792700579 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.6747425010840047 {[QG]|[NA]}STGV 0.81338 - 109 1 1.959 70833.6 0.6899999976158142 2618 4360 6971 HBL1_DMSO_200M_050219_2,6980 HBL1_DMSO_200M_050219_2,6980, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6981 37.584 800.0 276140.0 25 0 64341.0 -1 IAVYLCIS 8 157 469.7528854237339 937.4912179142678 2 470.2537719607353 MULTI CID FTMS 0 0 0 6971 152075.0625 0.8753100137464122 -1 0.07635498046875 10 Carbamidomethyl (C) _IAVYLC(Carbamidomethyl (C))IS_ ENSG00000221855|ENST00000408916|TAS2R41 19.438996006549623 0.6237395211498085 4 [{I|L}A]PDVSHTV 9 -1 + 50.489 0.0 0.0 5.3855 5.3855 78.806 0.0 0.0 0.0 23.2319095436452 5.593080109070122 5.593080109070122 5.593080109070122 0 0.3807196863200844 1.6989700043360187 1.319341519366547 0.0 [{I|L}A]PDVSHTV;[{I|L}A]PDVSHS{I|L};[{I|L}A]V[DP]SHTV;[{I|L}A]PDVS{[TV]|[{I|L}S]}H;[{I|L}A]V[DP]SHS{I|L};[{I|L}A]V[WM][YR];[{I|L}A]V{M(Oxidation (M))|F}[TP][YQ];[{I|L}A]PD[HT][VS]V;[{I|L}A][RK]C(Carbamidomethyl (C))[YQ];[{I|L}A]V[NP]YYV 5.3855;4.7889;3.9699;3.7575;3.3733;3.1221;3.1166;2.9748;2.8629;2.6547 -;-;-;-;-;-;-;-;-;- 439 + 1 1.959 172323.9 0.8100000023841858 2619 4360 6971 HBL1_DMSO_200M_050219_2,6981 HBL1_DMSO_200M_050219_2,6981,IAVYLCIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6982 37.598 800.0 228850.0 25 0 28166.0 + 5071 DGYEQAARV 9 151 504.7409398526873 1007.4673267721746 2 504.7418090701103 MULTI CID FTMS 0 0 0 6971 141248.71875 0.0004843054625337 123 -5.480293273925781 11 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 53.832793166522166 0.0319663582346103 4 [DG]YEQAARV 9 0 + 68.765 0.0 0.0 6.8255 6.8255 88.236 0.0 0.0 0.0 58.67101153204426 11.271211393095244 11.271211393095244 9.208187539523742 0 0.9559771852360796 0.6777807052660807 0.4247425010840047 0.6989700043360187 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YV[DN]ARV;[DG]YEV[NG]RV;[DG]YEQA{[NV]|[RG]}{I|L};[DG]YEQ[R{I|L}]Q;[DG]YVE[NG]RV;[DG]YE[AG]A{[NV]|[RG]}{I|L};[DG]YE[AG][R{I|L}]Q;[DG]YEV[RN]GV 6.8255;5.9115;4.8402;4.7231;4.6464;4.4098;4.3002;3.7324;3.4905;3.1665 +;-;-;-;-;-;-;-;-;- + 317 + 1 1.959 141736.7 0.8299999833106995 2620 4360 6971 HBL1_DMSO_200M_050219_2,6982 HBL1_DMSO_200M_050219_2,6982,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6983 37.613 800.0 108370.0 25 0 8775.0 + 44383 YLTHDSPSV 9 147 509.7457078305885 0 509.7456848025322 PEAK CID FTMS 0 0 0 6971 105172.7734375 0.6364229064526832 2 -0.1977996826171875 12 Unmodified _YLTHDSPSV_ ENSG00000124562|ENST00000244520|SNRPC 42.09456458481378 0.053291022336892 4 S 1 8 13.979 0.0 0.0 1.3739 0.0 0.0 301.1607572721577 626.2586153619749 927.4193726341324 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 + S 1.3739 + + 112 + 1 1.959 69270.9 0.6200000047683716 2621 4360 6971 HBL1_DMSO_200M_050219_2,6983 HBL1_DMSO_200M_050219_2,6983,YLTHDSPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6985 37.618 19.0 2444800.0 25 0 137870.0 + 22657 LPYRDSTQV 9 81 539.7801401633457 0 539.7802001833916 PEAK CID FTMS 0 0 0 6984 1908709.0 0.7626622127968178 1 -0.0973396301269531 1 Unmodified _LPYRDSTQV_ ENSG00000134508|ENST00000256925|CABLES1;nc|ENSG00000134508|Q8TDN4-2|CABLES1;nc|ENSG00000134508|Q8TDN4-4|CABLES1 41.8396318013385 0.053988301646488 4 {M(Oxidation (M))|F}PH 3 8 9.9215 0.0 0.0 0.92075 0.0 0.0 130.10809710195912 563.2310885065061 693.3391856084652 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}PH 0.92075 - 78 + 1 1.954 44436.2 1.0 2622 4361 6984 HBL1_DMSO_200M_050219_2,6985 HBL1_DMSO_200M_050219_2,6985,LPYRDSTQV True True LPYRDSTQV 37.617619 539.780200183392 21058640.0 6984.0 nc|ENSG00000134508|Q8TDN4-2|CABLES1;;ENSG00000134508|ENST00000256925|CABLES1;;nc|ENSG00000134508|Q8TDN4-4|CABLES1 3.777850170930227 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6986 37.619 51.0 1359900.0 25 0 111510.0 + 3785 DAHRSHPFI 9 78 360.51774177677737 1078.5313959305322 3 360.5175048708916 MULTI CID FTMS 0 0 0 6984 920671.4375 0.6990245564004167 -1 0.1004600524902343 2 Unmodified _DAHRSHPFI_ ENSG00000105669|ENST00000262812|COPE;ENST00000595984.5_1_19:19010490-19010792:-|nuORF;ENST00000598969.5_1_19:19010490-19016602:-|nuORF;nc|ENSG00000105669|O14579-2|COPE;nc|ENSG00000105669|O14579-3|COPE 21.74664581756881 0.2544899275067181 4 DWWM 4 8 17.013 0.0 0.0 1.5775 0.0 0.0 375.21560975806887 82.06697260074452 457.2825823588134 0.0 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.3252574989159953 0.0 DWWM 1.5775 - 140 + 1 1.954 64308.6 1.0 2623 4361 6984 HBL1_DMSO_200M_050219_2,6986 HBL1_DMSO_200M_050219_2,6986,DAHRSHPFI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6987 37.622 126.0 392700.0 25 0 28056.0 + 34772 NTAQGFRTV 9 94 497.25654762581246 992.4985423184248 2 497.2590515017509 MULTI CID FTMS 0 0 0 6984 378333.8125 0.5052477114269109 -1 0.1004600524902343 3 Unmodified _SQAVPTFLM_ ENSG00000089127|ENST00000202917|OAS1;nc|ENSG00000089127|P00973-2|OAS1;nc|ENSG00000089127|P00973-3|OAS1;nc|ENSG00000089127|P00973-4|OAS1 46.020951573049366 0.0490941689151868 4 {[QS]|[NT]}A 3 6 51.695 0.0 0.0 5.2085 0.0 0.0 0.0 703.3475162776624 703.3475162776624 16.746199743006045 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.7742275032520141 0.6505149978319906 + {[QS]|[NT]}A 5.2085 + + 229 1 1.954 41744.9 1.0 2624 4361 6984 HBL1_DMSO_200M_050219_2,6987 HBL1_DMSO_200M_050219_2,6987,SQAVPTFLM True False NTAQGFRTV 37.621534 497.259051501751 12035554.0 6984.0 ENSG00000089127|ENST00000202917|OAS1;;nc|ENSG00000089127|P00973-2|OAS1;;nc|ENSG00000089127|P00973-3|OAS1;;nc|ENSG00000089127|P00973-4|OAS1 7.203585624694824 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6988 37.625 163.0 636240.0 25 0 48977.0 + 4535 DAYPKNPHL 9 107 352.18248582592616 1053.5256280779786 3 352.1826354861259 MULTI CID FTMS 0 0 0 6984 380060.75 0.7323196261720509 1 -0.0973396301269531 4 Unmodified _DAYPKNPHL_ ENSG00000099940|ENST00000215730|SNAP29 42.09456458481378 0.0639583784996157 4 {[DA]|[EG]}YPKNPH{I|L} 9 0 + 60.829 0.0 0.0 5.7739 5.7739 84.779 0.0 0.0 0.0 49.04676038521386 9.57711861032834 9.57711861032834 9.208187539523747 0 0.2742275032520141 1.6989700043360187 0.0 0.3807196863200844 + + {[DA]|[EG]}YPKNPH{I|L};{[DA]|[EG]}YPKGGPH{I|L};WY{I|L}[EP]PH{I|L};WYPK{I|L}A[YN] 5.7739;4.8999;4.041;3.0512 +;-;-;- + 210 + 1 1.954 87580.6 1.0 2625 4361 6984 HBL1_DMSO_200M_050219_2,6988 HBL1_DMSO_200M_050219_2,6988,DAYPKNPHL True True DAYPKNPHL 37.624728 352.182635486126 16707110.0 6984.0 ENSG00000099940|ENST00000215730|SNAP29 8.17687733968099 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6989 37.631 339.0 215330.0 25 0 16903.0 31446 RPQSNWKESAN 11 102 658.8204817528074 1315.626410572415 2 658.8202392458916 MULTI CID FTMS 0 0 0 6984 292740.4375 0.3828051297236071 2 -0.20849609375 5 Unmodified _RPQSNWKESAN_ ENSG00000197077|ENST00000358431|KIAA1671 21.59015148037692 0.5852593066373742 4 {[DA]|[EG]}{[NV]|[RG]}[WK]PSQSAN 12 7 + 87.062 0.0 0.0 6.6175 6.6175 91.539 0.0 0.0 0.0 2.327245372023043 73.56668758921828 2.327245372023043 19.307804560813224 0 1.8252574989159955 1.3010299956639813 2.048455006504028 0.3252574989159953 {[DA]|[EG]}{[NV]|[RG]}[WK]PSQSAN;{[SA]|[TG]}GPS[K{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN;{[SA]|[TG]}GPS[WK]RQDAN;[PS]QS[K{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN;[PS]QS[WK]RQDAN;{[SA]|[TG]}GPS[WK]A{[NV]|[RG]}DAN;{[QS]|[NT]}PS[K{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN;{[QS]|[NT]}PS[WK]RQDAN;[PS]QS[WK]A{[NV]|[RG]}DAN;{[SA]|[TG]}GPS[WK]R[AG]DAN 6.6175;5.1499;4.9107;4.8791;4.6422;4.5216;4.5029;4.2659;4.2508;4.2192 -;-;-;-;-;-;-;-;-;- 671 1 1.954 57520.8 1.0 2626 4361 6984 HBL1_DMSO_200M_050219_2,6989 HBL1_DMSO_200M_050219_2,6989,RPQSNWKESAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6990 37.645 800.0 297490.0 25 0 27963.0 43008 VVYFVLPS 8 156 462.26348275175 922.5124125703 2 462.2639343142509 MULTI CID FTMS 0 0 0 6984 209729.3125 0.007162843300532 14 -0.863067626953125 6 Unmodified _VVYFVLPS_ ENST00000301919.8_1_11:105878863-105879127:-|nuORF 19.438996006549623 0.6237395211498085 4 VVYRYGGG 8 5 48.07 0.0 0.0 5.2108 0.0 0.0 0.0 68.05143152408436 68.05143152408436 27.09636449950647 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VVYRYGGG 5.2108 - 490 + 1 1.954 181592.6 0.800000011920929 2627 4361 6984 HBL1_DMSO_200M_050219_2,6990 HBL1_DMSO_200M_050219_2,6990,VVYFVLPS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 6991 37.653 474.0 262950.0 25 0 40021.0 + 36298 SYISDGKEY 9 126 531.2438089411252 1060.4730649490502 2 531.2435790896416 MULTI CID FTMS 0 0 0 6984 186099.3125 0.8000104784134607 -1 0.1004600524902343 7 Unmodified _SYISDGKEY_ ENSG00000197081|ENST00000356956|IGF2R 40.23920728925047 0.0741434193262949 4 [KG]DSE{I|L}YSY 9 7 + 63.827 0.0 0.0 6.0188 6.0188 82.056 0.0 0.0 0.0 2.243012119929091 25.147430403112217 2.243012119929091 6.131382658072319 0 0.3054621874040891 0.0 1.5189301784845295 0.0 [KG]DSE{I|L}YSY;[KG]DES{I|L}YSY;{[TV]|[{I|L}S]}NDS{I|L}YSY;[KG]DSEY{I|L}SY;[KG]DS{I|L}EYSY;[KG]EDS{I|L}YSY;{[TV]|[{I|L}S]}DGGS{I|L}YSY;{[TV]|[{I|L}S]}DNS{I|L}YSY;[KG]DESY{I|L}SY;{[TV]|[{I|L}S]}NDSY{I|L}SY 6.0188;5.4406;5.2551;5.2098;5.1788;5.0027;4.8276;4.7794;4.6317;4.4462 -;-;-;-;-;-;-;-;-;- 1434 1 1.954 95696.3 1.0 2628 4361 6984 HBL1_DMSO_200M_050219_2,6991 HBL1_DMSO_200M_050219_2,6991,SYISDGKEY True True SYISDGKEY 37.653113 531.243579089642 1485327.375 6984.0 ENSG00000197081|ENST00000356956|IGF2R 6.402189095815023 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6992 37.667 800.0 194810.0 25 0 19940.0 + + 19781 AAFVQRSTV 9 165 489.7698705156096 977.5251880980192 2 489.7700683474541 MULTI CID FTMS 0 0 0 6984 168792.703125 1.0 0 0.0 8 Unmodified _LGRYATGLQ_ nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2 37.97399986684836 0.0865783450051559 4 AA{M(Oxidation (M))|F}VT[Q{I|L}]TQ 9 -1 + 58.712 0.0 0.0 6.0062 6.0062 72.264 0.0 0.0 0.0 7.602131414518922 7.602131414518922 7.602131414518922 0.2427273283836939 0 0.5 1.0 0.8494850021680094 1.236346736360778 AA{M(Oxidation (M))|F}VT[Q{I|L}]TQ;AA{M(Oxidation (M))|F}VT[QT]{I|L}Q;AA{M(Oxidation (M))|F}VT[VS]RQ;AA{M(Oxidation (M))|F}VTWRQ;AA{M(Oxidation (M))|F}[KA]TVDR;[{M(Oxidation (M))|F}V]KNTVDR;{[VA]|[{I|L}G]}[YK]QVDR;AA{M(Oxidation (M))|F}VT[Q{I|L}]QT;AA{M(Oxidation (M))|F}VT[RN]VT;AA{M(Oxidation (M))|F}VT[QA]AVT 6.0062;5.9813;5.5893;5.3417;5.2285;5.2195;4.8796;4.7329;4.6108;4.564 -;-;-;-;-;-;-;-;-;- 2804 + 1 1.954 121107.6 0.7300000190734863 2629 4361 6984 HBL1_DMSO_200M_050219_2,6992 HBL1_DMSO_200M_050219_2,6992,LGRYATGLQ False False AAFVQRSTV 37.666928 489.770068347454 1795969.5 6984.0 nc|ENSG00000024048|Q8IWV8|UBR2;;ENSG00000024048|ENST00000372901|UBR2 5.270381609598796 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6993 37.681 800.0 135290.0 25 0 10842.0 -1 VAVDMMCS 8 130 464.6824537206545 927.3503545081088 2 464.6823303103447 MULTI CID FTMS 0 0 0 6984 146757.546875 1.0 0 0.0 9 Carbamidomethyl (C),Oxidation (M) _VAVDM(Oxidation (M))MC(Carbamidomethyl (C))S_ ENSG00000108557|ENST00000353383|RAI1 19.438996006549623 0.6237395211498085 4 VAV 3 -1 41.198 0.0 0.0 4.4425 0.0 0.0 0.0 655.1518038385374 655.1518038385374 25.530479290217887 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 VAV 4.4425 + + 61 + 1 1.954 86863.8 0.6499999761581421 2630 4361 6984 HBL1_DMSO_200M_050219_2,6993 HBL1_DMSO_200M_050219_2,6993,VAVDMMCS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6994 37.692 619.0 302840.0 25 0 22704.0 -1 0 137 402.2331776020473 401.2259011354473 1 403.2320129275322 MULTI CID FTMS 0 0 0 6984 129406.390625 0.0983148763043029 94 -4.322803497314453 10 4 P 1 -1 12.218 0.0 0.0 3.0453 0.0 0.0 286.162056386227 0.0 286.162056386227 0.0 2.7545373444029053 0.0 0.0 0 0.0 0.0 0.0 0.0 P 3.0453 - 14 + 1 1.954 147325.6 1.0 2631 4361 6984 HBL1_DMSO_200M_050219_2,6994 HBL1_DMSO_200M_050219_2,6994, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6995 37.707 800.0 60700.0 25 0 16803.0 -1 0 33 1134.4566308814954 3400.3480632446863 3 1135.124926745892 MULTI CID FTMS 0 0 0 6984 101178.71875 1.0 0 0.0 11 4 G 1 -1 6.9897 0.0 0.0 0.20556 0.0 0.0 1944.6782156878487 1395.6292351591128 3340.3074508469617 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20556 - 11 + 1 1.954 49200.6 0.4099999964237213 2632 4361 6984 HBL1_DMSO_200M_050219_2,6995 HBL1_DMSO_200M_050219_2,6995, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 6996 37.711 193.0 459790.0 25 0 58818.0 + 10632 FVNQHLCGS 9 105 502.734792487722 1003.455032042244 2 502.7343932986259 MULTI CID FTMS 0 0 0 6984 107083.859375 0.3042724526216376 -1 0.1004600524902343 12 Unmodified _FVNQHLCGS_ ENSG00000129965|ENST00000397270|INS-IGF2;ENSG00000254647|ENST00000381330|INS 24.020572477871973 0.2255576514309169 4 {[QN]|[E{I|L}]|[KN]}H{I|L}CG 6 3 40.13 0.0 0.0 3.9991 0.0 0.0 0.0 348.1582011836337 348.1582011836337 14.913121923735416 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.4247425010840047 0.9049471895720984 + {[QN]|[E{I|L}]|[KN]}H{I|L}CG 3.9991 + + 161 1 1.954 68438.3 1.0 2633 4361 6984 HBL1_DMSO_200M_050219_2,6996 HBL1_DMSO_200M_050219_2,6996,FVNQHLCGS False True FVNQHLCGS 37.710575 502.734393298626 2759064.25 6984.0 ENSG00000254647|ENST00000381330|INS;;ENSG00000129965|ENST00000397270|INS-IGF2 0.989876220623652 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6998 37.715 4.4 13877000.0 25 0 1747000.0 22197 LPQGEKVQAM 10 93 367.53021174267633 1099.568805828229 3 367.5296508669853 MULTI CID FTMS 0 0 0 6997 3752781.75 0.8391172925232828 1 -0.1111564636230468 1 Unmodified _LPQGEKVQAM_ ENSG00000135821|ENST00000331872|GLUL;ENST00000475808.5_1_1:182355349-182357923:-|nuORF;ENST00000489818.5_1_1:182354893-182357872:-|nuORF;ENST00000491322.1_1_1:182356257-182357923:-|nuORF 13.90604991867851 0.6142120002215601 4 [KC]PH[{I|L}T][R{M(Oxidation (M))|F}]V 9 10 + 23.134 0.0 0.0 2.1039 2.1039 76.935 0.0 0.0 0.0 7.64908724233678 3.925449767853312 3.925449767853312 17.78151250383644 0 0.0 0.0 0.0 0.0 [KC]PH[{I|L}T][R{M(Oxidation (M))|F}]V;{[QN]|[E{I|L}]|[KN]}A{I|L}[HA]H[Y{M(Oxidation (M))|F}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KS][KG]H[Y{M(Oxidation (M))|F}] 2.1039;0.48675;0.31048 -;-;- 195 + 1 1.954 57144.8 1.0 2634 4362 6997 HBL1_DMSO_200M_050219_2,6998 HBL1_DMSO_200M_050219_2,6998,LPQGEKVQAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 6999 37.716 14.0 3815300.0 25 0 274280.0 + 22590 LPYDSKHQI 9 89 550.7908807850292 1099.5672086368584 2 550.7908203005791 MULTI CID FTMS 0 0 0 6997 2743411.25 0.8246050912557923 1 -0.1111564636230468 2 Unmodified _LPYDSKHQI_ ENSG00000134242|ENST00000359785|PTPN22;ENST00000484147.5_1_1:114375712-114414257:-|nuORF;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;nc|ENSG00000134242|Q9Y2R2-6|PTPN22;nc|ENSG00000134242|Q9Y2R2|PTPN22 32.78568957990786 0.1150597335874693 4 {I|L}PYD[KS]H[Q{I|L}] 9 0 + 55.582 0.0 0.0 5.0549 5.0549 86.976 0.0 0.0 0.0 38.58226858864825 5.004311474114331 5.004311474114331 55.582137524178 0 0.0 2.0 0.0 0.75 + + {I|L}PYD[KS]H[Q{I|L}] 5.0549 + + 150 + 1 1.954 46193.3 1.0 2635 4362 6997 HBL1_DMSO_200M_050219_2,6999 HBL1_DMSO_200M_050219_2,6999,LPYDSKHQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7000 37.717 4.1 15418000.0 25 0 1701000.0 + 21445 LPHHRVIEV 9 92 367.21764255817567 1098.631098274727 3 367.2176391482353 MULTI CID FTMS 0 0 0 6997 11021421.0 0.5172302278804648 -1 0.0973396301269531 3 Unmodified _LPHHRVIEV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 41.8396318013385 0.0653578398400075 4 {I|L}PHH 4 5 34.277 0.0 0.0 3.12 0.0 0.0 0.0 611.3543001558882 611.3543001558882 18.07950361376121 0.0 0.0 0.0 0 0.5796896906561032 1.0969100130080565 0.0 0.0 + {I|L}PHH 3.12 + + 116 + 1 1.954 64955.8 1.0 2636 4362 6997 HBL1_DMSO_200M_050219_2,7000 HBL1_DMSO_200M_050219_2,7000,LPHHRVIEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7001 37.719 45.0 1319300.0 25 0 156380.0 + 5791 DPPPGSHVI 9 82 459.7377035282235 917.460854123247 2 459.7378417849541 MULTI CID FTMS 0 0 0 6997 1280932.0 0.1304524056659882 54 -2.4764633178710938 4 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 42.09456458481378 0.0639583784996157 4 [DP]PPAP 6 5 46.097 0.0 0.0 5.0244 0.0 0.0 0.0 340.1493517275806 340.1493517275806 29.899137950735085 0.0 0.0 0.0 0 1.1822333069283657 2.0 0.9124379954164592 0.0 [DP]PPAP 5.0244 - 154 1 1.954 52965.4 1.0 2637 4362 6997 HBL1_DMSO_200M_050219_2,7001 HBL1_DMSO_200M_050219_2,7001,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7002 37.72 50.0 791470.0 25 0 117570.0 -1 QDSGMYVCI 9 62 544.7229188457202 1087.4312847582405 2 544.7234374880791 MULTI CID FTMS 0 0 0 6997 1276744.875 1.0 0 0.0 5 Carbamidomethyl (C),Oxidation (M) _QDSGM(Oxidation (M))YVC(Carbamidomethyl (C))I_ ENSG00000174482|ENST00000698399|LINGO2 7.910154910731844 0.6385446671287552 4 [YV]Q 3 -1 31.695 0.0 0.0 2.9146 0.0 0.0 0.0 694.2170568131809 694.2170568131809 15.24104976468614 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [YV]Q 2.9146 - 41 1 1.954 37868.6 1.0 2638 4362 6997 HBL1_DMSO_200M_050219_2,7002 HBL1_DMSO_200M_050219_2,7002,QDSGMYVCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7003 37.725 248.0 458330.0 25 0 117790.0 -1 0 44 1129.125241517038 3384.3538951513137 3 1129.460498034954 MULTI CID FTMS 0 0 0 6997 865401.4375 1.0 0 0.0 6 4 E 1 -1 6.9897 0.0 0.0 0.20653 0.0 0.0 2728.125132079587 524.1633394830686 3252.288471562656 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20653 - 8 + 1 1.954 102450.2 1.0 2639 4362 6997 HBL1_DMSO_200M_050219_2,7003 HBL1_DMSO_200M_050219_2,7003, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7004 37.728 150.0 507160.0 25 0 52140.0 + 32295 RWPKKSAEF 9 103 574.8141299707913 1147.6137070083826 2 574.8145019412041 MULTI CID FTMS 0 0 0 6997 366966.0 1.0 0 0.0 7 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 18.373094154950223 0.3393451798331396 4 [WR]PKK{[SA]|[TG]}E{M(Oxidation (M))|F} 9 0 + 33.489 0.0 0.0 2.9181 2.9181 61.631 0.0 0.0 0.0 3.4286373909302696 9.548793152518172 3.4286373909302696 0.4068182437442473 0 0.9386218330464624 0.0 0.0 0.0 + + [WR]PKK{[SA]|[TG]}E{M(Oxidation (M))|F};[WR]PKK{[SA]|[TG]}{M(Oxidation (M))|F}E;[KP][WR]K{[SA]|[TG]}E{M(Oxidation (M))|F};[KP][WR]K{[SA]|[TG]}{M(Oxidation (M))|F}E;[WR][MT][KA]{I|L}SGV 2.9181;2.8827;1.939;1.9035;0.79291 +;-;-;-;- + 262 1 1.954 60096.2 1.0 2640 4362 6997 HBL1_DMSO_200M_050219_2,7004 HBL1_DMSO_200M_050219_2,7004,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7005 37.732 212.0 311700.0 25 0 24200.0 + 25385 NAYTSSQI 8 91 442.2117013715476 882.4088498098953 2 442.2117492556572 MULTI CID FTMS 0 0 0 6997 354194.5 0.5477436057731248 2 -0.2417640686035156 8 Unmodified _NAYTSSQI_ ENSG00000157456|ENST00000288207|CCNB2 12.531546534597751 0.7257836412119636 4 {[QG]|[NA]}YT 4 4 26.031 0.0 0.0 2.95 0.0 0.0 0.0 430.19388944296094 430.19388944296094 12.05136871872881 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + {[QG]|[NA]}YT 2.95 + + 155 1 1.954 57836.0 1.0 2641 4362 6997 HBL1_DMSO_200M_050219_2,7005 HBL1_DMSO_200M_050219_2,7005,NAYTSSQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7006 37.737 306.0 321960.0 25 0 41909.0 + 22496 LPVPTRAP 8 93 425.7610386944438 849.5075244556876 2 425.7612182497978 MULTI CID FTMS 0 0 0 6997 300794.9375 0.2900431293340642 15 -0.8586311340332031 9 Unmodified _LPVPTRAP_ REV__ENST00000477110.6_1_X:302544-308028:-|nuORF 25.399314129420983 0.5099049743284904 4 {I|L}PPV{M(Oxidation (M))|F} 5 -1 59.68 0.0 0.0 7.0253 0.0 0.0 0.0 293.1514986627563 293.1514986627563 49.30187172299068 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 {I|L}PPV{M(Oxidation (M))|F} 7.0253 - 76 + 1 1.954 81343.0 1.0 2642 4362 6997 HBL1_DMSO_200M_050219_2,7006 HBL1_DMSO_200M_050219_2,7006,LPVPTRAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7007 37.742 275.0 282180.0 25 0 36798.0 + 23805 LVDSNNPKI 9 91 500.27723412962 998.53991532604 2 500.2785522341728 MULTI CID FTMS 0 0 0 6997 283014.71875 0.2970872984464612 4 -0.365875244140625 10 Unmodified _LVDSNNPKI_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928-2|POLR2A;nc|ENSG00000181222|P24928|POLR2A 47.74868867922204 0.0453060283459952 4 {I|L}VD[WE]P[K{I|L}] 8 3 + 71.585 0.0 0.0 7.169 7.169 77.111 0.0 0.0 0.0 59.11114057108961 4.164317917986224 4.164317917986224 0.5115252244738144 0 0.7059771852360797 2.0 0.7614393726401688 0.8494850021680094 {I|L}VD[WE]P[K{I|L}];{I|L}VD[NS]NP[K{I|L}];{I|L}VD[NS]GGP[K{I|L}];{I|L}V[WH][Q{I|L}]{[CT]|[{M(Oxidation (M))|F}G]} 7.169;7.1178;6.1956;3.614 -;+;-;- + 195 + 1 1.954 65407.7 1.0 2643 4362 6997 HBL1_DMSO_200M_050219_2,7007 HBL1_DMSO_200M_050219_2,7007,LVDSNNPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7008 37.756 800.0 160380.0 25 0 15286.0 6861 EEEEGTYHCT 10 145 599.2223650819634 1196.4301772307267 2 599.2226440310478 MULTI CID FTMS 0 0 0 6997 213955.140625 0.96168177053968 -1 0.0973396301269531 11 Unmodified _EEEEGTYHCT_ ENSG00000131116|ENST00000300811|ZNF428 8.745405648335112 0.6861838735306406 4 NQYA{I|L}Y 6 9 29.5 0.0 0.0 2.4657 0.0 0.0 426.07213027168126 0.0 426.07213027168126 0.0 -3.2296248029075656 -3.2296248029075656 0.0 0 0.7742275032520141 0.0 0.0 1.174742501084005 NQYA{I|L}Y 2.4657 - 566 1 1.954 96566.2 0.8199999928474426 2644 4362 6997 HBL1_DMSO_200M_050219_2,7008 HBL1_DMSO_200M_050219_2,7008,EEEEGTYHCT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7009 37.77 800.0 371350.0 25 0 25324.0 36395 SYRCHECGKAF 11 148 650.7815959584584 1299.5486389837167 2 650.7819702029228 MULTI CID FTMS 0 0 0 6997 213239.21875 0.1515159690451258 -2 0.1977996826171875 12 Unmodified _SYRCHECGKAF_ nc|ENSG00000269001|Q6ZRF7|ZNF818P 20.41453444215458 0.6105011870913812 4 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F} 11 8 + 95.435 0.0 0.0 7.3437 7.3437 77.658 0.0 0.0 0.0 0.5471659609672486 1.6156591345500573 0.5471659609672486 0.5471659609672486 0 0.8494850021680094 0.0 1.3754223615525998 1.819341519366547 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F};[HS][PG]DEAQQNA{M(Oxidation (M))|F};[PG]SHDEAQQNA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F};[HS][PG]DEAQQGGA{M(Oxidation (M))|F};[HS][PG]DEA[AG]QNA{M(Oxidation (M))|F};[HS][PG]DEAQ[AG]NA{M(Oxidation (M))|F} 7.3437;7.3016;7.2307;7.1512;6.6412;6.6412;6.6412;6.6015;6.6015;6.6015 -;-;-;-;-;-;-;-;-;- 14460 1 1.954 215172.4 0.8100000023841858 2645 4362 6997 HBL1_DMSO_200M_050219_2,7009 HBL1_DMSO_200M_050219_2,7009,SYRCHECGKAF False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7010 37.775 254.0 163870.0 25 0 7105.9 + 30291 QYQANANQL 9 94 525.2531967833494 1048.491840633499 2 525.2537109255791 MULTI CID FTMS 0 0 0 6997 173257.59375 0.4299895407922288 1 -0.1111564636230468 13 Unmodified _QYQANANQL_ ENSG00000089177|ENST00000354981|KIF16B;nc|ENSG00000089177|Q96L93-2|KIF16B;nc|ENSG00000089177|Q96L93-4|KIF16B;nc|ENSG00000089177|Q96L93-5|KIF16B;nc|ENSG00000089177|Q96L93-6|KIF16B 28.486842064014134 0.1687311288560894 4 [YQ]Q{[QG]|[NA]}AP 7 3 28.433 0.0 0.0 2.7118 0.0 0.0 0.0 273.09673564797896 273.09673564797896 8.13264452080993 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 1.1989700043360187 [YQ]Q{[QG]|[NA]}AP 2.7118 - 373 1 1.954 38527.9 1.0 2646 4362 6997 HBL1_DMSO_200M_050219_2,7010 HBL1_DMSO_200M_050219_2,7010,QYQANANQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7011 37.781 373.0 228420.0 25 0 26657.0 + 4537 DAYPKNPHL 9 120 527.7693613553644 1053.5241697775286 2 527.7691528201103 MULTI CID FTMS 0 0 0 6997 151952.734375 0.5429278069970147 3 -0.3030052185058594 14 Unmodified _DAYPKNPHL_ ENSG00000099940|ENST00000215730|SNAP29 36.12702656103203 0.0967173616627612 4 {[DA]|[EG]}YPKNPH{I|L} 9 0 + 54.101 0.0 0.0 5.1352 5.1352 82.063 0.0 0.0 0.0 42.50685020462235 6.075543018713816 6.075543018713816 9.208187539523747 0 1.1861818737241734 1.0457574905606752 0.0 0.0 + + {[DA]|[EG]}YPKNPH{I|L};{[DA]|[EG]}YPKGGPH{I|L};{[DA]|[EG]}YPK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SV;{[DA]|[EG]}YPK[RH][PA];{[DA]|[EG]}YP[RP][PA][PA] 5.1352;4.2612;3.1984;1.9516;0.98562 +;-;-;-;- + 316 + 1 1.954 71788.5 1.0 2647 4362 6997 HBL1_DMSO_200M_050219_2,7011 HBL1_DMSO_200M_050219_2,7011,DAYPKNPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7012 37.796 800.0 274020.0 25 0 20683.0 26045 NMLVTNFWMST 11 140 672.3093929200804 1342.6042329069608 2 672.3080322146416 MULTI CID FTMS 0 0 0 6997 134585.265625 0.3363714240124041 -1 0.0973396301269531 15 Unmodified _NMLVTNFWMST_ ENSG00000066405|ENST00000183605|CLDN18;nc|ENSG00000066405|P56856-2|CLDN18 22.65808497894818 0.560183898709508 4 NMPN{I|L}NADQR[NG] 12 9 + 115.76 0.0 0.0 8.6218 8.6218 91.726 0.0 0.0 0.0 51.0422196671626 0.9720660658253736 0.9720660658253736 9.098233696509112 0 0.9698565171985376 1.6989700043360187 0.3252574989159953 2.4035091073498256 NMPN{I|L}NADQR[NG];NMPN{I|L}GGADQR[NG];NMPGG{I|L}NADQR[NG];NMPN{I|L}NAD[AG]R[NG];NMPN{I|L}NWQR[NG];NMPN{I|L}NAD[RN]{[QG]|[NA]};NMPGG{I|L}NAD[AG]R[NG];NMPGG{I|L}GGADQR[NG];NMPN{I|L}GGAD[AG]R[NG];NMPGG{I|L}NWQR[NG] 8.6218;7.9442;7.9442;7.9442;7.6449;7.5456;7.2684;7.2684;7.2684;6.965 -;-;-;-;-;-;-;-;-;- 7420 + 1 1.954 160522.0 0.6399999856948853 2648 4362 6997 HBL1_DMSO_200M_050219_2,7012 HBL1_DMSO_200M_050219_2,7012,NMLVTNFWMST False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7013 37.81 800.0 115200.0 25 0 16417.0 42160 VSCSCALSCS 10 136 480.1857630396198 958.3569731460396 2 480.1856262087822 MULTI CID FTMS 0 0 0 6997 137611.65625 1.0 0 0.0 16 Unmodified _VSCSCALSCS_ ENST00000504869.1_1_4:83821360-83821651:-|nuORF 6.2057823575117 0.6979311171683138 4 [VS]T 3 8 27.932 0.0 0.0 2.9146 0.0 0.0 0.0 668.1851951521521 668.1851951521521 14.436974992327125 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [VS]T 2.9146 - 129 1 1.954 72657.4 0.6000000238418579 2649 4362 6997 HBL1_DMSO_200M_050219_2,7013 HBL1_DMSO_200M_050219_2,7013,VSCSCALSCS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7014 37.816 294.0 261150.0 25 0 37551.0 + -1 MYHNSSEF 8 106 507.7034165899568 1013.3922802467137 2 507.7033874392509 MULTI CID FTMS 0 0 0 6997 120389.0859375 0.3175954366908581 -2 0.1977996826171875 17 Oxidation (M) _SNHSEM(Oxidation (M))FF_ ENST00000475662.5_1_2:27017350-27017374:+|nuORF 29.081581746732265 0.4323690340403521 4 {[WN]|[YH]}MNSSE{M(Oxidation (M))|F} 8 -1 + 53.141 0.0 0.0 5.2439 5.2439 74.096 0.0 0.0 0.0 2.9684285749067385 9.63660567114374 2.9684285749067385 2.9684285749067385 0 0.5 0.0 1.3807196863200843 0.0 {[WN]|[YH]}MNSSE{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{[QS]|[NT]}NSSE{M(Oxidation (M))|F};[HN]SYMSE{M(Oxidation (M))|F};{[WN]|[YH]}MGGSSE{M(Oxidation (M))|F};[NS]HYMSE{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{[QS]|[NT]}GGSSE{M(Oxidation (M))|F};[HN]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SSE{M(Oxidation (M))|F};[HN]S{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F};[HN]S[{M(Oxidation (M))|F}E]S{M(Oxidation (M))|F}{M(Oxidation (M))|F};[HN]SY{[CP]|[EA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5.2439;4.951;4.707;4.3299;4.1754;4.0423;3.9877;3.6164;3.5378;3.1746 -;-;-;-;-;-;-;-;-;- 660 1 1.954 64186.6 1.0 2650 4362 6997 HBL1_DMSO_200M_050219_2,7014 HBL1_DMSO_200M_050219_2,7014,SNHSEMFF False False MYHNSSEF 37.815549 507.703387439251 2940055.5 6997.0 ENST00000475662.5_1_2:27017350-27017374:+|nuORF 7.293279488881429 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7015 37.822 271.0 460200.0 25 0 66421.0 + 29972 QSVVENCTM 9 139 534.2287002098426 1066.442847486485 2 534.2287475466728 MULTI CID FTMS 0 0 0 6997 90965.890625 0.0561390664121152 -2 0.1977996826171875 18 Carbamidomethyl (C) _QSVVENC(Carbamidomethyl (C))TM_ ENST00000551276.1_1_12:56706564-56708983:-|nuORF 85.64151623876279 0.0161498729896241 4 {[QS]|[NT]}VGEGV{[TV]|[{I|L}S]}P 10 5 53.47 0.0 0.0 5.0139 0.0 0.0 0.0 109.92681425525691 109.92681425525691 30.29491859017588 0.0 0.0 0.0 0 1.5994850021680094 0.9208187539523752 1.9101359949697527 1.2447026752325154 {[QS]|[NT]}VGEGV{[TV]|[{I|L}S]}P 5.0139 - 1705 1 1.954 99326.3 1.0 2651 4362 6997 HBL1_DMSO_200M_050219_2,7015 HBL1_DMSO_200M_050219_2,7015,QSVVENCTM True False MAYVQRQAV 37.821746 534.228747546673 1919570.625 6997.0 nc|ENSG00000135506|Q13438-5|OS9;;nc|ENSG00000135506|Q13438-7|OS9 0.4955714146296183 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7017 37.826 7.2 8573600.0 25 0 1261300.0 + 6811 EEAPSRPAL 9 84 485.2538040177107 968.4930551022214 2 485.2539550662041 MULTI CID FTMS 0 0 0 7016 9722068.0 1.0 0 0.0 1 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 36.12702656103203 0.0967173616627612 4 EEAPSR[PA]{I|L} 9 0 + 54.816 0.0 0.0 5.6599 5.6599 89.552 0.0 0.0 0.0 40.2119811855394 5.686362358410122 5.686362358410122 54.81607495530128 0 0.4247425010840047 1.5228787452803376 0.4247425010840047 0.0 + + EEAPSR[PA]{I|L} 5.6599 + + 66 + 1 1.945 55796.3 1.0 2652 4363 7016 HBL1_DMSO_200M_050219_2,7017 HBL1_DMSO_200M_050219_2,7017,EEAPSRPAL True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7018 37.827 29.0 2278300.0 25 0 256780.0 + 32288 RWPKKSAEF 9 106 383.5453438582354 1147.6142021749065 3 383.5453369021416 MULTI CID FTMS 0 0 0 7016 1706802.0 0.843311307277986 1 -0.1306076049804687 2 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 24.99096001346401 0.2132109383330889 4 [WR][KP]KSAE{M(Oxidation (M))|F} 9 0 + 60.837 0.0 0.0 5.3011 5.3011 76.537 0.0 0.0 0.0 19.15423722065668 53.84697482522071 19.15423722065668 4.018637558036673 0 0.8494850021680094 1.5228787452803376 0.0 0.0 + + [WR][KP]KSAE{M(Oxidation (M))|F};[WR][KP]KSA{M(Oxidation (M))|F}E;[WR][KP]K{[WT]|[RM]}{M(Oxidation (M))|F};{[SA]|[TG]}[KP]RRSAE{M(Oxidation (M))|F};{[SA]|[TG]}[KP]RRSA{M(Oxidation (M))|F}E 5.3011;4.951;3.3651;3.0595;2.7093 +;-;-;-;- + 141 1 1.945 58196.4 1.0 2653 4363 7016 HBL1_DMSO_200M_050219_2,7018 HBL1_DMSO_200M_050219_2,7018,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7019 37.828 14.0 4517400.0 25 0 475960.0 + 21448 LPHHRVIEV 9 69 550.3225356483899 1098.6305183635798 2 550.3227416872978 MULTI CID FTMS 0 0 0 7016 4199179.0 1.0 0 0.0 3 Unmodified _LPHHRVIEV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 36.506200033944 0.094635877243972 4 {I|L}PHH 4 5 58.998 0.0 0.0 5.3701 0.0 0.0 0.0 611.3532203551471 611.3532203551471 27.397355284160952 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.0 0.0 + {I|L}PHH 5.3701 + + 188 + 1 1.945 52436.9 1.0 2654 4363 7016 HBL1_DMSO_200M_050219_2,7019 HBL1_DMSO_200M_050219_2,7019,LPHHRVIEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7020 37.83 25.0 2146000.0 25 0 139810.0 + 12212 GQTGVIRSV 9 83 458.7643508332176 915.5141487332352 2 458.7646057009697 MULTI CID FTMS 0 0 0 7016 2280118.75 0.9488977545171215 -1 0.1111564636230468 4 Unmodified _GQTGVIRSV_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 40.23920728925047 0.0741434193262949 4 {[QG]|[NA]}TGV{I|L}RSV 9 0 + 57.926 0.0 0.0 6.3271 6.3271 92.272 0.0 0.0 0.0 30.92097737863484 7.236286549994659 7.236286549994659 57.925930760249365 0 1.0 0.744727494896694 0.0 0.2396518287104437 + + {[QG]|[NA]}TGV{I|L}RSV 6.3271 + + 188 + 1 1.945 48341.1 1.0 2655 4363 7016 HBL1_DMSO_200M_050219_2,7020 HBL1_DMSO_200M_050219_2,7020,GQTGVIRSV True True GQTGVIRSV 37.829656 458.76460570097 17931900.0 7016.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 5.980170090993245 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7021 37.831 64.0 861580.0 25 0 77262.0 + 3277 AYHGHGVSAF 10 76 523.2464139240866 1044.478274914973 2 523.2466308474541 MULTI CID FTMS 0 0 0 7016 913350.375 0.1113937080844528 -3 0.3089561462402344 5 Unmodified _AYHGHGVSAF_ ENST00000429772.6_1_12:48357436-48358078:+|nuORF;ENST00000550146.5_1_12:48357374-48358078:+|nuORF 63.562846038646086 0.0272401946707695 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGHGVSA{M(Oxidation (M))|F} 10 0 + 53.018 0.0 0.0 5.0761 5.0761 74.812 0.0 0.0 0.0 19.286662482156338 36.02867538573598 19.286662482156338 3.521825181113627 0 1.1989700043360187 1.6989700043360187 0.9247425010840048 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGHGVSA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGHKDA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[HN]VSA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGQAY[HV];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[YT]YA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HG[AG]AY[HV];[HV]SRHGH{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HQQY[HV];[HV]DR[PS]{[MG]|[TS]}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGQ{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]} 5.0761;4.7389;4.2651;3.765;3.5728;2.8834;2.4473;2.3828;2.3552;2.258 +;-;-;-;-;-;-;-;-;- + 370 1 1.945 49043.8 1.0 2656 4363 7016 HBL1_DMSO_200M_050219_2,7021 HBL1_DMSO_200M_050219_2,7021,AYHGHGVSAF True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7022 37.833 64.0 1215500.0 25 0 270130.0 + 3280 AYHGHGVSAF 10 92 349.16686648247673 1044.4787700476302 3 349.1665527224541 MULTI CID FTMS 0 0 0 7016 774833.5625 0.1108161744704208 -4 0.3853111267089844 6 Unmodified _AYHGHGVSAF_ ENST00000429772.6_1_12:48357436-48358078:+|nuORF;ENST00000550146.5_1_12:48357374-48358078:+|nuORF 38.15118350030904 0.1770901513673823 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}GVSA{M(Oxidation (M))|F} 10 0 + 32.54 0.0 0.0 3.1154 3.1154 64.596 0.0 0.0 0.0 7.930902953988848 15.973936379523558 7.930902953988848 1.7609125905568064 0 0.3182503180159344 1.6989700043360187 0.7887254899964358 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}GVSA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[HN]VSA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}KDA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}]RDA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}]GVDA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG]{M(Oxidation (M))|F}RDA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}RSA{M(Oxidation (M))|F};[HV]DVGWW{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG][MT]VSA{M(Oxidation (M))|F};[HV]DR{M(Oxidation (M))|F}[QP]{M(Oxidation (M))|F} 3.1154;2.9468;2.5018;2.4312;2.3822;2.3064;2.2136;2.0465;1.9894;1.9707 +;-;-;-;-;-;-;-;-;- + 294 1 1.945 71125.2 1.0 2657 4363 7016 HBL1_DMSO_200M_050219_2,7022 HBL1_DMSO_200M_050219_2,7022,AYHGHGVSAF False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7023 37.835 79.0 542850.0 25 0 46774.0 + 3874 DAKSTSIQV 9 72 474.7535597060666 947.4925664789332 2 474.7537109255791 MULTI CID FTMS 0 0 0 7016 557540.4375 0.5963507585038164 1 -0.1306076049804687 7 Unmodified _DAKSTSIQV_ ENSG00000076242|ENST00000231790|MLH1;ENST00000435176.5_1_3:37035370-37045944:+|nuORF;ENST00000454028.5_1_3:37035144-37045944:+|nuORF;ENST00000458205.6_1_3:37035370-37038667:+|nuORF;ENST00000466900.5_1_3:37035370-37047454:+|nuORF;ENST00000539477.5_1_3:37035370-37053334:+|nuORF 36.12702656103203 0.0967173616627612 4 {[DA]|[EG]}[KS]{[MG]|[TS]}{I|L}QV 9 0 + 34.912 0.0 0.0 3.6847 3.6847 73.117 0.0 0.0 0.0 6.255410871774856 9.137342758552698 6.255410871774856 6.255410871774856 0 0.5796896906561032 2.0 0.7742275032520141 0.0 + + {[DA]|[EG]}[KS]{[MG]|[TS]}{I|L}QV;[AG]V{[CA]|SS}{[MG]|[TS]}{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{[MG]|[TS]}{I|L}QV 3.6847;3.0245;1.8915 +;-;- + 102 1 1.945 40042.4 1.0 2658 4363 7016 HBL1_DMSO_200M_050219_2,7023 HBL1_DMSO_200M_050219_2,7023,DAKSTSIQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7024 37.842 405.0 187190.0 25 0 14216.0 -1 SFMDVSNPFYQ 11 97 675.7888556664083 1349.5631583996164 2 675.7894164919853 MULTI CID FTMS 0 0 0 7016 224840.25 1.0 0 0.0 8 Oxidation (M) _SFM(Oxidation (M))DVSNPFYQ_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 36.506200033944 0.2662161991516171 4 [HD]EAQQNA{M(Oxidation (M))|F}YQ 11 -1 + 90.883 0.0 0.0 6.7342 6.7342 85.325 0.0 0.0 0.0 4.357285695614365 83.80418138346927 4.357285695614365 6.575773191777927 0 1.0 0.0 0.9559771852360796 1.1382104921644451 [HD]EAQQNA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QNA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QNA{M(Oxidation (M))|F}YQ;[HD]EAQQGGA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]NA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QGGA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K][AG]NA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}YQ;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QGGA{M(Oxidation (M))|F}YQ 6.7342;6.247;6.0578;6.0578;6.0578;5.5679;5.5679;5.3837;5.3837;5.3837 -;-;-;-;-;-;-;-;-;- 422 1 1.945 59418.3 1.0 2659 4363 7016 HBL1_DMSO_200M_050219_2,7024 HBL1_DMSO_200M_050219_2,7024,SFMDVSNPFYQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7025 37.846 195.0 434260.0 25 0 67758.0 + 18179 KTVIALHKV 9 105 336.89050476422466 1007.649684892874 3 336.8899719119072 MULTI CID FTMS 0 0 0 7016 208529.59375 0.8625844154719374 1 -0.1306076049804687 9 Unmodified _KTVIALHKV_ ENSG00000160683|ENST00000292174|CXCR5;nc|ENSG00000160683|P32302-2|CXCR5 16.149105407346934 0.3995459350917656 4 {[TV]|[{I|L}S]}K 3 6 28.235 0.0 0.0 2.8021 0.0 0.0 0.0 676.4160477681271 676.4160477681271 3.0797645886003373 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.1747425010840047 0.0 {[TV]|[{I|L}S]}K 2.8021 - 141 1 1.945 69845.3 1.0 2660 4363 7016 HBL1_DMSO_200M_050219_2,7025 HBL1_DMSO_200M_050219_2,7025,KTVIALHKV False True KTVIALHKV 37.845566 336.889971911907 1599608.125 7016.0 nc|ENSG00000160683|P32302-2|CXCR5;;ENSG00000160683|ENST00000292174|CXCR5 1.9794089595476787 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7026 37.859 800.0 121830.0 25 0 9626.2 -1 EGMNIVETME 10 111 584.7489824271805 1167.483411921161 2 584.7494384646416 MULTI CID FTMS 0 0 0 7016 158506.203125 1.0 0 0.0 10 Oxidation (M) _EGMNIVETM(Oxidation (M))E_ ENST00000557282.1_1_12:98984503-98984704:-|nuORF 21.53697664764585 0.484802182336468 4 WMTC(Carbamidomethyl (C))VRCNV 9 -1 + 56.623 0.0 0.0 4.85 4.85 67.348 0.0 0.0 0.0 0.1918721078823537 0.1918721078823537 0.1918721078823537 0.1918721078823537 0 1.274227503252014 0.0 0.3494850021680094 0.8494850021680094 WMTC(Carbamidomethyl (C))VRCNV;{[DA]|[EG]}MK[YN]Q[PS]D;WMQ[MT]RCNV;WMTC(Carbamidomethyl (C))VR{[MG]|[TS]}Q;WMQ[MT]R{[MG]|[TS]}Q;WMTC(Carbamidomethyl (C))VCRNV;WMQ[MT]CRNV;WMQ[MT]{M(Oxidation (M))|F}[EP]V;WMT[CG]VRCNV;WM[AG][MT]RCNV 4.85;4.8336;4.79;4.5238;4.4637;4.2732;4.2132;4.0769;4.0613;4.0012 -;-;-;-;-;-;-;-;-;- 717 + 1 1.945 77208.1 0.699999988079071 2661 4363 7016 HBL1_DMSO_200M_050219_2,7026 HBL1_DMSO_200M_050219_2,7026,EGMNIVETME False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7027 37.873 800.0 173010.0 25 0 15927.0 + -1 QSRRWRCGL 9 125 609.8146324452445 1217.6147119572888 2 609.8148071169853 MULTI CID FTMS 0 0 0 7016 146300.71875 0.5137439775347851 -1 0.1111564636230468 11 Carbamidomethyl (C) _QSRRWRC(Carbamidomethyl (C))GL_ REV__ENST00000235180.4_1_1:35334661-35351837:-|nuORF 20.453626601364224 0.2830276176381075 4 [VG]Q[WK]DPSQS 10 -1 74.504 0.0 0.0 6.1189 0.0 0.0 0.0 102.05679958720376 102.05679958720376 61.40510499844545 0.0 0.0 0.0 0 1.566901560044258 1.154901959985743 1.5114393726401687 1.274227503252014 [VG]Q[WK]DPSQS 6.1189 - 478 1 1.945 106081.0 0.6800000071525574 2662 4363 7016 HBL1_DMSO_200M_050219_2,7027 HBL1_DMSO_200M_050219_2,7027,QSRRWRCGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7028 37.887 800.0 217890.0 25 0 23103.0 34378 SLTPQQAQAQG 11 141 564.7865689537797 1127.5585849743593 2 564.7868530154228 MULTI CID FTMS 0 0 0 7016 138591.59375 0.4306506664750476 -1 0.1111564636230468 12 Unmodified _SLTPQQAQAQG_ ENSG00000185958|ENST00000327337|FAM186A 15.248480904072842 0.7179608125786238 4 PQD 3 9 35.802 0.0 0.0 3.1752 0.0 0.0 170.06890042269112 614.3278593282363 784.3967597509275 0.0 0.0 0.0 0.0 0 0.5 0.0 0.6549471895720985 0.805462187404089 PQD 3.1752 - 789 + 1 1.945 135492.3 0.6600000262260437 2663 4363 7016 HBL1_DMSO_200M_050219_2,7028 HBL1_DMSO_200M_050219_2,7028,SLTPQQAQAQG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7029 37.901 800.0 91971.0 25 0 14608.0 -1 0 54 1123.3677939466384 2244.721034960077 2 1123.369311511517 MULTI CID FTMS 0 0 0 7016 131555.5625 0.8792530758510643 -11 0.6283149719238281 13 4 D 1 -1 3.9794 0.0 0.0 0.17728 0.0 0.0 1722.5408114266768 404.1207190185437 2126.6615304452207 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.17728 - 25 + 1 1.945 62564.5 0.4600000083446502 2664 4363 7016 HBL1_DMSO_200M_050219_2,7029 HBL1_DMSO_200M_050219_2,7029, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7030 37.916 800.0 138570.0 25 0 12168.0 6749 EDREGLENLV 10 137 587.2909111998156 1172.567269466431 2 587.2896606326103 MULTI CID FTMS 0 0 0 7016 127326.0546875 0.8139891641486933 -1 0.1111564636230468 14 Unmodified _EDREGLENLV_ ENST00000521130.1_1_5:168547122-168727722:-|nuORF 36.12702656103203 0.1984647928738587 4 QSANV{I|L} 6 9 67.969 0.0 0.0 5.7966 0.0 0.0 542.2359486310562 0.0 542.2359486310562 0.0 46.09189699011423 0.0 0.0 0 0.7302046884880937 0.0 1.305462187404089 1.1861818737241734 QSANV{I|L} 5.7966 - 1189 1 1.945 85273.0 0.5799999833106995 2665 4363 7016 HBL1_DMSO_200M_050219_2,7030 HBL1_DMSO_200M_050219_2,7030,EDREGLENLV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7031 37.924 407.0 190450.0 25 0 13567.0 + 21833 LPNPTKPNNV 10 124 547.303947912225 1092.59334289125 2 547.3046752810478 MULTI CID FTMS 0 0 0 7016 115290.8046875 0.4297957072687238 -11 0.6283149719238281 15 Unmodified _LPNPTKPNNV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 47.594388314883695 0.0942698883389255 4 {I|L}PNPTK[RH]M 9 4 + 75.952 0.0 0.0 6.9516 6.9516 83.895 0.0 0.0 0.0 22.557809497117844 4.752640521395065 4.752640521395065 4.752640521395065 0 0.8807196863200843 1.6989700043360187 0.3494850021680094 0.3807196863200844 {I|L}PNPTK[RH]M;{I|L}PNPTK[NP]NV;{I|L}PGGPTK[RH]M;{I|L}PNV[QT]K{M(Oxidation (M))|F}{M(Oxidation (M))|F};{I|L}PGGPTK[NP]NV;{I|L}PNPTK[NP]GGV;{I|L}PGGV[QT]K{M(Oxidation (M))|F}{M(Oxidation (M))|F};{I|L}PNV{NN|[MP]|[D{I|L}]|[EV]}[Y{I|L}]{M(Oxidation (M))|F};{I|L}{NN|[MP]|[D{I|L}]|[EV]}[DV]PK{M(Oxidation (M))|F}{M(Oxidation (M))|F};{I|L}[QT]{[NV]|[RG]}PK{M(Oxidation (M))|F}{M(Oxidation (M))|F} 6.9516;6.5166;6.1088;5.7229;5.6778;5.4893;4.8801;4.5852;0.31823;0.20388 -;+;-;-;-;-;-;-;-;- + 917 + 1 1.945 67047.5 1.0 2666 4363 7016 HBL1_DMSO_200M_050219_2,7031 HBL1_DMSO_200M_050219_2,7031,LPNPTKPNNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7032 37.937 800.0 233400.0 25 0 25596.0 + 36348 SYPDNHQEF 9 167 568.7358753689622 1135.4571978047245 2 568.7349731326103 MULTI CID FTMS 0 0 0 7016 105809.9609375 0.3000272698192439 -10 0.6008110046386719 16 Unmodified _SYPDNHQEF_ ENSG00000169967|ENST00000682094|MAP3K2 41.8396318013385 0.0653578398400075 4 [AG]GQN{M(Oxidation (M))|F}VDP[MT] 11 10 + 42.614 0.0 0.0 3.753 3.753 65.81 0.0 0.0 0.0 2.8458232963880405 2.8458232963880405 2.8458232963880405 1.4261514288442925 0 0.9731975075880328 1.6989700043360187 0.3054621874040891 1.048455006504028 [AG]GQN{M(Oxidation (M))|F}VDP[MT];[AG]NAN{M(Oxidation (M))|F}VDP[MT];[AG]GGAN{M(Oxidation (M))|F}VDP[MT];{[{M(Oxidation (M))|F}C]|[YS]}PDN[HA]EG{M(Oxidation (M))|F};[AG]GQ{M(Oxidation (M))|F}M{M(Oxidation (M))|F}{M(Oxidation (M))|F}[MT];[AG]GQQAE{M(Oxidation (M))|F}P[MT];[AG]ANN{M(Oxidation (M))|F}VDP[MT];[AG]NA{M(Oxidation (M))|F}M{M(Oxidation (M))|F}{M(Oxidation (M))|F}[MT];[AG]NAQAE{M(Oxidation (M))|F}P[MT];[AG]GQ{M(Oxidation (M))|F}ME{M(Oxidation (M))|F}SY 3.753;3.6274;3.5207;3.5024;3.2246;3.2211;3.1375;3.099;3.0955;3.007 -;-;-;-;-;-;-;-;-;- 5017 1 1.945 140056.6 0.550000011920929 2667 4363 7016 HBL1_DMSO_200M_050219_2,7032 HBL1_DMSO_200M_050219_2,7032,SYPDNHQEF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7033 37.952 800.0 140810.0 25 0 28701.0 1503 ALGVEVFGF 9 128 469.7528854237339 937.4912179142678 2 469.7515136599541 MULTI CID FTMS 0 0 0 7016 100376.5703125 0.5456745099071841 1 -0.1306076049804687 17 Unmodified _ALGVEVFGF_ ENST00000518563.5_3_8:42249167-42251383:+|nuORF 18.13498045792455 0.3457906370836843 4 [{I|L}A]PD 4 7 29.609 0.0 0.0 3.1583 0.0 0.0 0.0 538.2616671197874 538.2616671197874 7.102328011224298 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.3807196863200844 0.0 [{I|L}A]PD 3.1583 - 423 + 1 1.945 88114.4 0.4900000095367431 2668 4363 7016 HBL1_DMSO_200M_050219_2,7033 HBL1_DMSO_200M_050219_2,7033,ALGVEVFGF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7035 37.957 65.0 884450.0 25 0 101450.0 24011 LVYDLFFY 8 70 540.2752108748781 1078.535868816556 2 540.2730590701103 MULTI CID FTMS 0 0 0 7034 904556.1875 0.5112054126197869 4 -0.2158432006835937 1 Unmodified _LVYDLFFY_ HAL1_dup21739|chr20:4024584-4025416:+|1.0515913160234027|0.1385400223363406|2.92|48.0|45|2|anti-sense 20.871210003555333 0.6025813472596342 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{[QG]|[NA]}HP{M(Oxidation (M))|F}{I|L} 9 7 + 57.157 0.0 0.0 5.2995 5.2995 86.931 0.0 0.0 0.0 2.6567174039983144 48.74606867853579 2.6567174039983144 24.916440611282624 0 0.9247425010840048 2.0 0.3807196863200844 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{[QG]|[NA]}HP{M(Oxidation (M))|F}{I|L};{I|L}[YV]D[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L};{I|L}[YV]H[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}{I|L};{I|L}[YV]H[QP][WH] 5.2995;2.9893;1.8001;0.56488 -;-;-;- 184 1 1.939 51199.5 1.0 2669 4364 7034 HBL1_DMSO_200M_050219_2,7035 HBL1_DMSO_200M_050219_2,7035,LVYDLFFY False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 7036 37.959 66.0 846680.0 25 0 70236.0 + 3786 DAHRSHPFI 9 75 360.51774177677737 1078.5313959305322 3 360.5176879763603 MULTI CID FTMS 0 0 0 7034 626846.125 0.4759361663801427 2 -0.1241111755371093 2 Unmodified _DAHRSHPFI_ ENSG00000105669|ENST00000262812|COPE;ENST00000595984.5_1_19:19010490-19010792:-|nuORF;ENST00000598969.5_1_19:19010490-19016602:-|nuORF;nc|ENSG00000105669|O14579-2|COPE;nc|ENSG00000105669|O14579-3|COPE 13.90604991867851 0.4602628045680013 4 {NN|[MP]|[D{I|L}]|[EV]}NHSH 6 6 22.24 0.0 0.0 2.062 0.0 0.0 0.0 372.1919570250573 372.1919570250573 4.280768228398493 0.0 0.0 0.0 0 0.2396518287104437 1.5228787452803376 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}NHSH 2.062 - 236 1 1.939 52463.5 1.0 2670 4364 7034 HBL1_DMSO_200M_050219_2,7036 HBL1_DMSO_200M_050219_2,7036,DAHRSHPFI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7037 37.961 76.0 739180.0 25 0 67986.0 33177 SFAYLLMVY 9 91 553.7826925377248 1105.5508321422494 2 553.7829467654228 MULTI CID FTMS 0 0 0 7034 719641.375 0.8066508721565223 -1 0.1306076049804687 3 Unmodified _SFAYLLMVY_ ENST00000503051.1_1_4:53527397-53527544:+|nuORF 13.50788311687929 0.4710407108020397 4 YYGS 4 8 34.055 0.0 0.0 3.0803 0.0 0.0 0.0 632.3505812479713 632.3505812479713 20.9556125503638 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 YYGS 3.0803 - 119 1 1.939 49462.4 1.0 2671 4364 7034 HBL1_DMSO_200M_050219_2,7037 HBL1_DMSO_200M_050219_2,7037,SFAYLLMVY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7038 37.962 72.0 733780.0 25 0 45947.0 + 42735 VVDPNDPQM 9 77 507.731820046605 1013.44908716001 2 507.7319824099541 MULTI CID FTMS 0 0 0 7034 658004.875 0.0499901368975074 -7 0.5624809265136719 4 Unmodified _VVDPNDPQM_ ENSG00000151883|ENST00000281631|PARP8 21.74664581756881 0.2544899275067181 4 VVD 3 6 17.447 0.0 0.0 1.7216 0.0 0.0 0.0 697.2614095079193 697.2614095079193 0.4575749056067515 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + VVD 1.7216 + + 147 1 1.939 48684.4 1.0 2672 4364 7034 HBL1_DMSO_200M_050219_2,7038 HBL1_DMSO_200M_050219_2,7038,VVDPNDPQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7039 37.966 200.0 283530.0 25 0 32368.0 34758 SQAMQKTSL 9 89 497.25654762581246 992.4985423184248 2 497.2592651247978 MULTI CID FTMS 0 0 0 7034 273140.9375 0.3647673800471532 2 -0.1241111755371093 5 Unmodified _SQAMQKTSL_ ENSG00000075399|ENST00000389386|VPS9D1;nc|ENSG00000075399|Q9Y2B5-2|VPS9D1 27.628801355627647 0.1796483985696185 4 {[QS]|[NT]}A 3 6 43.389 0.0 0.0 4.3717 0.0 0.0 0.0 703.3480655940687 703.3480655940687 28.684151806525392 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.7134679910804405 0.2302046884880938 + {[QS]|[NT]}A 4.3717 + + 125 1 1.939 47312.0 1.0 2673 4364 7034 HBL1_DMSO_200M_050219_2,7039 HBL1_DMSO_200M_050219_2,7039,SQAMQKTSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7040 37.971 267.0 280740.0 25 0 17868.0 + 12216 GQTPVFSKA 9 107 467.7535985949904 933.4926442567807 2 467.7539550662041 MULTI CID FTMS 0 0 0 7034 215813.609375 0.5678519109689086 -2 0.2417640686035156 6 Unmodified _GQTPVFSKA_ ENSG00000142676|ENST00000643754|RPL11;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;nc|ENSG00000142676|P62913-2|RPL11 27.22323531849824 0.1848086127304535 4 {[QG]|[NA]}TPV{M(Oxidation (M))|F}SKA 9 0 + 35.497 0.0 0.0 3.8026 3.8026 67.112 0.0 0.0 0.0 16.56223880765351 3.682409970128923 3.682409970128923 1.989700043360188 0 1.0 0.0 0.0 0.0 + + {[QG]|[NA]}TPV{M(Oxidation (M))|F}SKA;{[QS]|[NT]}APV{M(Oxidation (M))|F}SKA;{[QG]|[NA]}TP[KG][Y{I|L}]A;{[QS]|[NT]}AP[KG][Y{I|L}]A;{[QG]|[NA]}TVV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GV;{[QS]|[NT]}AVV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GV;{[QG]|[NA]}TVV[MT]KA;{[QS]|[NT]}AVV[MT]KA 3.8026;3.5895;1.5864;1.3732;1.1335;0.92033;0.56413;0.35099 +;-;-;-;-;-;-;- + 274 + 1 1.939 62208.6 1.0 2674 4364 7034 HBL1_DMSO_200M_050219_2,7040 HBL1_DMSO_200M_050219_2,7040,GQTPVFSKA False True GQTPVFSKA 37.97114 467.753955066204 6934777.0 7034.0 ENSG00000142676|ENST00000643754|RPL11;;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;;nc|ENSG00000142676|P62913-2|RPL11 6.919831116994222 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7041 37.985 800.0 192290.0 25 0 18211.0 + 21114 LPANSVTKV 9 136 464.7773152170644 927.5400775009288 2 464.7773315310478 MULTI CID FTMS 0 0 0 7034 169873.421875 0.8076598692205854 -1 0.1306076049804687 7 Unmodified _LPANSVTKV_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 45.739877483867886 0.0497104363764649 4 {I|L}PANSVTKV 9 0 + 71.64 0.0 0.0 7.7236 7.7236 91.317 0.0 0.0 0.0 8.235228231192409 12.587418566968154 8.235228231192409 9.208187539523747 0 1.135151878060192 1.6989700043360187 0.0 0.4247425010840047 + + {I|L}PANSVTKV;{I|L}PAGGSVTKV;{I|L}PANSVSK{I|L};{I|L}V[HK]V[W{M(Oxidation (M))|F}] 7.7236;6.7309;5.8444;2.1586 +;-;-;- + 614 + 1 1.939 118148.6 0.6899999976158142 2675 4364 7034 HBL1_DMSO_200M_050219_2,7041 HBL1_DMSO_200M_050219_2,7041,LPANSVTKV True True LPANSVTKV 37.984955 464.777331531048 1314795.25 7034.0 nc|ENSG00000124155|Q969N2-2|PIGT;;nc|ENSG00000124155|Q969N2-6|PIGT;;nc|ENSG00000124155|Q969N2-3|PIGT;;nc|ENSG00000124155|Q969N2-4|PIGT;;ENSG00000124155|ENST00000279036|PIGT;;nc|ENSG00000124155|Q969N2-5|PIGT 6.055262088775635 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7042 37.999 800.0 146680.0 25 0 24811.0 24318 MEDDDDDASY 10 140 588.1882881044828 1174.3620232757655 2 588.1880370974541 MULTI CID FTMS 0 0 0 7034 164499.140625 1.0 0 0.0 8 Unmodified _MEDDDDDASY_ ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF 6.723162845929126 0.6955379296933136 4 {[MS]|[{M(Oxidation (M))|F}A]}ES 4 8 16.233 0.0 0.0 1.3823 0.0 0.0 0.0 737.1910997740655 737.1910997740655 0.5322788648285872 0.0 0.0 0.0 0 0.0 0.6777807052660807 0.7059771852360797 0.0 {[MS]|[{M(Oxidation (M))|F}A]}ES 1.3823 - 344 1 1.939 89782.5 0.75 2676 4364 7034 HBL1_DMSO_200M_050219_2,7042 HBL1_DMSO_200M_050219_2,7042,MEDDDDDASY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7043 38.003 246.0 865560.0 25 0 48760.0 279 ADKHGHLC 8 149 440.7069286126061 879.3993042920123 2 441.2087585330009 MULTI CID FTMS 0 0 0 7034 163466.765625 0.6129329484694184 -1 0.1306076049804687 9 Unmodified _ADKHGHLC_ ENSG00000179938|ENST00000567927|GOLGA8J 42.09456458481378 0.1992492688217789 4 AYADK 5 7 57.013 0.0 0.0 6.4832 0.0 0.0 0.0 328.1189301775236 328.1189301775236 36.77530476200069 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.8252574989159953 0.5 AYADK 6.4832 - 2341 + 1 1.939 165209.5 1.0 2677 4364 7034 HBL1_DMSO_200M_050219_2,7043 HBL1_DMSO_200M_050219_2,7043,ADKHGHLC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7044 38.014 583.0 281770.0 25 0 71793.0 + 5297 NVTTEVKSV 9 144 488.2680240568127 0 488.2683593630791 PEAK CID FTMS 0 0 0 7034 103002.59375 0.6635166523690078 -14 0.8453826904296875 10 Unmodified _DLCREKLV_ ENST00000547505.2_1_12:44054314-44054545:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENSG00000156508|ENST00000309268|EEF1A1;nc|ENSG00000196205|Q5VTE0|EEF1A1P5 20.453626601364224 0.4093984001168845 4 PP 2 8 10.969 0.0 0.0 1.1256 0.0 0.0 111.97919157225849 665.4127854231582 777.3919769954167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 1.1256 - 121 + 1 1.939 130816.8 1.0 2678 4364 7034 HBL1_DMSO_200M_050219_2,7044 HBL1_DMSO_200M_050219_2,7044,DLCREKLV False False NVTTEVKSV 38.013571 488.268359363079 641070.875 7034.0 ENST00000547505.2_1_12:44054314-44054545:+|nuORF;;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;;ENSG00000156508|ENST00000309268|EEF1A1;;nc|ENSG00000196205|Q5VTE0|EEF1A1P5 0.7611561516920725 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7046 38.018 3.9 14194000.0 25 0 1186300.0 + 21446 LPHHRVIEV 9 86 367.21764255817567 1098.631098274727 3 367.2176391482353 MULTI CID FTMS 0 0 0 7045 13377226.0 0.6277870750412745 2 -0.0811500549316406 1 Unmodified _LPHHRVIEV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 36.12702656103203 0.0967173616627612 4 [{I|L}P]HV{[RE]|[WV]}H{I|L}V 9 4 + 31.988 0.0 0.0 2.9117 2.9117 70.513 0.0 0.0 0.0 5.736733410745575 5.736733410745575 5.736733410745575 5.736733410745575 0 0.9073871488943877 1.2218487496163564 0.805462187404089 0.0 [{I|L}P]HV{[RE]|[WV]}H{I|L}V;[{I|L}P]HHRVE{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}HRVE{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]HHP{I|L}V;[{I|L}P]HV{M(Oxidation (M))|F}[{I|L}A][R{M(Oxidation (M))|F}];[{I|L}P]{[QS]|[NT]}[KS]VE{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[KQ][VG]VE{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}VVA{[QN]|[E{I|L}]|[KN]}E{I|L}V 2.9117;2.3895;1.8386;1.6261;1.4998;1.3998;0.46119;0.23997 -;-;-;-;-;-;-;- 300 + 1 1.939 53636.1 1.0 2679 4365 7045 HBL1_DMSO_200M_050219_2,7046 HBL1_DMSO_200M_050219_2,7046,LPHHRVIEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7047 38.019 53.0 1014500.0 25 0 88323.0 26176 NQENRFCGWF 10 77 650.7815959584584 1299.5486389837167 2 650.7819702029228 MULTI CID FTMS 0 0 0 7045 1123693.125 0.7984340485852613 1 -0.0628700256347656 2 Unmodified _NQENRFCGWF_ nc|ENSG00000164708|P15259|PGAM2 18.1463463914782 0.5430639438673815 4 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F} 11 7 + 83.478 0.0 0.0 6.4236 6.4236 77.634 0.0 0.0 0.0 4.299228001854743 68.87425319246988 4.299228001854743 2.133713753366024 0 0.805462187404089 0.0 1.0941876774005248 1.25 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG[HD]AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}Q[HD]AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F};[HS][PG]DEAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG[HD]AQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG[HD]AQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG[HD]A[AG]QNA{M(Oxidation (M))|F} 6.4236;6.2595;6.1178;5.7212;5.7212;5.7212;5.578;5.5593;5.5593;5.5593 -;-;-;-;-;-;-;-;-;- 971 1 1.939 47080.6 1.0 2680 4365 7045 HBL1_DMSO_200M_050219_2,7047 HBL1_DMSO_200M_050219_2,7047,NQENRFCGWF False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7048 38.022 146.0 467280.0 25 0 39016.0 + 45733 YYGPAETRK 9 80 542.7752489489474 1083.5359449646946 2 542.7751953005791 MULTI CID FTMS 0 0 0 7045 342240.96875 0.8748788741692546 -1 0.0612411499023437 3 Unmodified _YYGPAETRK_ REV__ENSG00000114166|ENST00000263754|KAT2B;REV__ENST00000468400.1_1_3:20189792-20189999:+|nuORF 4.3292370932331545 0.7635526921153418 4 [QP]YYS 5 -1 22.218 0.0 0.0 2.0506 0.0 0.0 0.0 442.2436712822361 442.2436712822361 11.249387366083 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [QP]YYS 2.0506 - 69 + 1 1.939 55966.7 1.0 2681 4365 7045 HBL1_DMSO_200M_050219_2,7048 HBL1_DMSO_200M_050219_2,7048,YYGPAETRK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7049 38.026 169.0 339280.0 25 0 20231.0 8075 EPATRVPEV 9 106 499.2685869815552 996.5226210299104 2 499.2693359255791 MULTI CID FTMS 0 0 0 7045 209549.625 0.6111128021690095 -7 0.6161346435546875 4 Unmodified _EPATRVPEV_ ENST00000519579.1_X:52238938-52240854:+|nuORF 30.63653989081413 0.1413794767160703 4 [EP]V[TA]REPV 9 3 + 41.801 0.0 0.0 4.1947 4.1947 80.35 0.0 0.0 0.0 12.22058091587676 12.22058091587676 12.22058091587676 12.22058091587676 0 1.1435078169319297 1.6989700043360187 0.3252574989159953 0.0 [EP]V[TA]REPV;Q[KS]R[PG]PEV;[{I|L}P]{[WT]|[RM]}[VG]PEV;Q{[QD]|[EN]|[WG]|[KD]|[RS]}K[PG]PEV;[{I|L}T]E[PG]RPEV;Q[KS]R[PG]EPV;[{I|L}P]{[WT]|[RM]}[VG]EPV;Q{[QD]|[EN]|[WG]|[KD]|[RS]}K[PG]EPV;{NN|[MP]|[D{I|L}]|[EV]}P[TA]REPV;Q[KS]R[PG]PD{I|L} 4.1947;2.9683;2.8966;2.8416;2.7647;2.7413;2.6696;2.6145;2.4327;2.1926 -;-;-;-;-;-;-;-;-;- 312 1 1.939 50783.2 1.0 2682 4365 7045 HBL1_DMSO_200M_050219_2,7049 HBL1_DMSO_200M_050219_2,7049,EPATRVPEV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7050 38.03 257.0 344740.0 25 0 134900.0 -1 0 100 496.2024015308072 495.1951250642072 1 496.2030517458916 MULTI CID FTMS 0 0 0 7045 194132.0625 0.8940016928138018 -1 0.0612411499023437 5 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QD]|[EN]|[WG]|[KD]|[RS]} 4 -1 + 22.676 0.0 0.0 4.5792 4.5792 68.418 0.0 0.0 0.0 1.249387366082999 1.249387366082999 1.249387366082999 1.249387366082999 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}{[{M(Oxidation (M))|F}D]|MM};[AG]S{[{M(Oxidation (M))|F}D]|MM};{[YD]|[{M(Oxidation (M))|F}M]}[QA] 4.5792;4.3269;3.2932;0.89601 -;-;-;- 20 1 1.939 72677.8 1.0 2683 4365 7045 HBL1_DMSO_200M_050219_2,7050 HBL1_DMSO_200M_050219_2,7050, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7051 38.044 800.0 177100.0 25 0 15376.0 + -1 EMWCINRNWPQ 11 112 775.3369604954394 1548.6593680576786 2 775.3365966677666 MULTI CID FTMS 0 0 0 7045 151800.90625 0.0453440093991178 -7 0.6161346435546875 6 Carbamidomethyl (C),Oxidation (M) _EM(Oxidation (M))WC(Carbamidomethyl (C))INRNWPQ_ REV__ENST00000295974.12_1_4:41145057-41216499:-|nuORF;REV__ENST00000502682.1_1_4:41145057-41218531:-|nuORF;REV__ENST00000503555.5_1_4:41145057-41179590:-|nuORF 8.155526934196011 0.8366696279279818 4 [QA]HDEAGANAGA{M(Oxidation (M))|F}YQ 15 -1 + 112.19 0.0 0.0 7.2441 7.2441 77.185 0.0 0.0 0.0 7.010013220239003 53.49891329915265 7.010013220239003 0.4845500650402812 0 1.0 0.0 1.0044321917401078 2.337180496500464 [QA]HDEAGANAGA{M(Oxidation (M))|F}YQ;[QA]HDEAGAQGGA{M(Oxidation (M))|F}YK;[QA]HDEAGANQA{M(Oxidation (M))|F}YQ;[QA]HDEAGAQNA{M(Oxidation (M))|F}YK;[QA]HDEAQNAGA{M(Oxidation (M))|F}YK;[QA]HDEAQQGGA{M(Oxidation (M))|F}YQ;[QA]HDEAQNQA{M(Oxidation (M))|F}YQ;[QA]HDEAQQNA{M(Oxidation (M))|F}YK;[QA]HDEAGNAAGA{M(Oxidation (M))|F}YQ;[QA]HDEAGAGGAGA{M(Oxidation (M))|F}YQ 7.2441;7.2129;7.1202;7.0889;7.0065;6.9752;6.8841;6.8528;6.7104;6.661 -;-;-;-;-;-;-;-;-;- 50552 1 1.939 99624.3 0.6499999761581421 2684 4365 7045 HBL1_DMSO_200M_050219_2,7051 HBL1_DMSO_200M_050219_2,7051,EMWCINRNWPQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7052 38.058 800.0 112150.0 25 0 13443.0 + -1 VGITVWSGRMM 11 101 626.8111585642557 1251.6077641953111 2 626.8109008669853 MULTI CID FTMS 0 0 0 7045 151957.890625 0.8687568822816405 -2 0.1918487548828125 7 Oxidation (M) _VGITVWSGRM(Oxidation (M))M_ REV__ENSG00000165678|ENST00000372134|GHITM 6.2057823575117 0.8458686499021061 4 VS 2 -1 16.083 0.0 0.0 1.285 0.0 0.0 725.3312807209703 337.1519869440063 1062.483267664977 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 VS 1.285 - 237 + 1 1.939 74409.7 0.699999988079071 2685 4365 7045 HBL1_DMSO_200M_050219_2,7052 HBL1_DMSO_200M_050219_2,7052,VGITVWSGRMM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7053 38.063 246.0 266250.0 25 0 28148.0 + 5072 DGYEQAARV 9 107 504.7409398526873 1007.4673267721746 2 504.7422057986259 MULTI CID FTMS 0 0 0 7045 128747.0859375 0.0004414405847829 128 -5.261028289794922 8 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 20.41453444215458 0.284085796332423 4 EQAARV 6 3 26.93 0.0 0.0 2.673 0.0 0.0 335.11041221095326 0.0 335.11041221095326 0.0 7.00827206916173 0.0 0.0 0 0.6307196863200843 0.0 0.4247425010840047 0.0 + EQAARV 2.673 + + 162 + 1 1.939 51532.2 1.0 2686 4365 7045 HBL1_DMSO_200M_050219_2,7053 HBL1_DMSO_200M_050219_2,7053,DGYEQAARV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7054 38.076 800.0 83416.0 25 0 6371.0 + -1 FSKGCNMCEY 10 107 599.2223650819634 1196.4301772307267 2 599.2223388552666 MULTI CID FTMS 0 0 0 7045 115212.65625 0.5178558034521613 2 -0.0811500549316406 9 Oxidation (M) _FSKGCNM(Oxidation (M))CEY_ REV__ENSG00000089335|ENST00000505242|ZNF302;REV__ENSG00000197841|ENST00000492450|ZNF181;REV__ENST00000509196.1_1_19:35173669-35176139:+|nuORF;REV__nc|ENSG00000089335|Q9NR11|ZNF302;REV__nc|ENSG00000197841|Q2M3W8-2|ZNF181;REV__nc|ENSG00000197841|Q2M3W8-3|ZNF181 3.944395688203298 0.708391353636983 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA 4 -1 24.27 0.0 0.0 2.0285 0.0 0.0 0.0 831.2462532407454 831.2462532407454 9.6657624451305 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA 2.0285 - 262 1 1.939 54269.9 0.6100000143051147 2687 4365 7045 HBL1_DMSO_200M_050219_2,7054 HBL1_DMSO_200M_050219_2,7054,FSKGCNMCEY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7056 38.081 46.0 895770.0 25 0 145860.0 + 29973 QSVVENCTM 9 84 534.2287002098426 1066.442847486485 2 534.2289916872978 MULTI CID FTMS 0 0 0 7055 1240833.5 0.7657731242366699 2 -0.0917320251464843 1 Carbamidomethyl (C) _QSVVENC(Carbamidomethyl (C))TM_ ENST00000551276.1_1_12:56706564-56708983:-|nuORF 66.45667989310934 0.0225072657982126 4 {[QS]|[NT]}VV 4 5 48.373 0.0 0.0 4.5359 0.0 0.0 0.0 650.1930970804882 650.1930970804882 30.47096932708321 0.0 0.0 0.0 0 0.9247425010840048 0.958607314841775 0.9049471895720984 0.5796896906561032 + {[QS]|[NT]}VV 4.5359 + + 185 1 1.939 39730.8 1.0 2688 4366 7055 HBL1_DMSO_200M_050219_2,7056 HBL1_DMSO_200M_050219_2,7056,QSVVENCTM True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7057 38.095 800.0 119180.0 25 0 8339.9 + 24707 MNYAMKMCRPV 11 106 672.3093929200804 1342.6042329069608 2 672.3093139529228 MULTI CID FTMS 0 0 0 7055 119823.5 0.2994770723078573 3 -0.1291999816894531 2 Unmodified _MNYAMKMCRPV_ REV__ENSG00000164930|ENST00000358755|FZD6 18.1463463914782 0.6576820063886638 4 [MN]PN{I|L}NADQ 9 -1 83.483 0.0 0.0 6.218 0.0 0.0 0.0 342.15305505924067 342.15305505924067 51.043704980708526 0.0 0.0 0.0 0 0.7302046884880937 1.5228787452803376 0.0 1.960409376976188 [MN]PN{I|L}NADQ 6.218 - 847 + 1 1.939 73883.0 0.8799999952316284 2689 4366 7055 HBL1_DMSO_200M_050219_2,7057 HBL1_DMSO_200M_050219_2,7057,MNYAMKMCRPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7059 38.099 7.9 6371500.0 25 0 577460.0 + 3278 AYHGHGVSAF 10 70 523.2464139240866 1044.478274914973 2 523.2466308474541 MULTI CID FTMS 0 0 0 7058 7235776.5 0.8824871563723218 1 -0.0734519958496093 1 Unmodified _AYHGHGVSAF_ ENST00000429772.6_1_12:48357436-48358078:+|nuORF;ENST00000550146.5_1_12:48357374-48358078:+|nuORF 85.35673624503755 0.0126777600935658 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}GVSA{M(Oxidation (M))|F} 10 0 + 76.394 0.0 0.0 7.3141 7.3141 87.08 0.0 0.0 0.0 19.286662482156345 57.185559738766045 19.286662482156345 6.53212513775344 0 1.4802046884880935 1.6989700043360187 1.424742501084005 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}GVSA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[HN]VSA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}RSA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}KDA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}]RDA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG]{M(Oxidation (M))|F}RDA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG][MT]VSA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP}G{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}][PS]SA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}][VG]DA{M(Oxidation (M))|F} 7.3141;6.6887;6.6887;6.6655;5.304;5.255;4.6848;4.5613;4.4404;4.4172 +;-;-;-;-;-;-;-;-;- + 661 1 1.939 46529.0 1.0 2690 4367 7058 HBL1_DMSO_200M_050219_2,7059 HBL1_DMSO_200M_050219_2,7059,AYHGHGVSAF True True AYHGHGVSAF 38.099114 523.246630847454 283898092.0 7058.0 ENST00000550146.5_1_12:48357374-48358078:+|nuORF;;ENST00000429772.6_1_12:48357436-48358078:+|nuORF 9.342673619588217 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7060 38.1 8.1 7739500.0 25 0 1964700.0 + 3281 AYHGHGVSAF 10 68 349.16686648247673 1044.4787700476302 3 349.1665832400322 MULTI CID FTMS 0 0 0 7058 6992062.0 1.0 0 0.0 2 Unmodified _AYHGHGVSAF_ ENST00000429772.6_1_12:48357436-48358078:+|nuORF;ENST00000550146.5_1_12:48357374-48358078:+|nuORF 30.22481116460888 0.2896002054046443 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[HN]VSA{M(Oxidation (M))|F} 9 2 + 39.007 0.0 0.0 3.7346 3.7346 80.164 0.0 0.0 0.0 17.72756218496938 22.0172156934973 17.72756218496938 17.90221594415691 0 0.3182503180159344 1.6989700043360187 0.7742275032520141 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[HN]VSA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[QG]|[NA]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG][MT]VSA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG][R{M(Oxidation (M))|F}]DA{M(Oxidation (M))|F};{[WT]|[RM]}{[WT]|[RM]}{M(Oxidation (M))|F}SA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASA{M(Oxidation (M))|F};[HV]SV[MT][QP]{M(Oxidation (M))|F};[HV]SWW[PS]{M(Oxidation (M))|F};[HV]D[R{M(Oxidation (M))|F}][QP]{M(Oxidation (M))|F};[HV]SA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{M(Oxidation (M))|F} 3.7346;2.0206;2.014;1.6768;1.6111;1.5572;1.2525;0.92048;0.92048;0.7957 -;-;-;-;-;-;-;-;-;- 219 1 1.939 56745.3 1.0 2691 4367 7058 HBL1_DMSO_200M_050219_2,7060 HBL1_DMSO_200M_050219_2,7060,AYHGHGVSAF False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7061 38.101 31.0 1946500.0 25 0 224470.0 + 32289 RWPKKSAEF 9 104 383.5453438582354 1147.6142021749065 3 383.5452148318291 MULTI CID FTMS 0 0 0 7058 1588676.875 0.7849470367966264 5 -0.2005882263183593 3 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 18.1463463914782 0.3454829746528889 4 [WR][KP]A[KS]E{M(Oxidation (M))|F} 9 2 + 42.61 0.0 0.0 3.7129 3.7129 66.358 0.0 0.0 0.0 16.45119965945284 37.1252997059802 16.45119965945284 1.7609125905568137 0 0.4247425010840047 1.5228787452803376 0.0 0.0 [WR][KP]A[KS]E{M(Oxidation (M))|F};[WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F};[WR][KP]K{[WT]|[RM]}{M(Oxidation (M))|F};[KP][WR]A[KS]E{M(Oxidation (M))|F};[KP][WR]K{[SA]|[TG]}E{M(Oxidation (M))|F};[KP]SRVK{[WT]|[RM]}{M(Oxidation (M))|F};[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}R[KS]E{M(Oxidation (M))|F};[KP][WR]K{[WT]|[RM]}{M(Oxidation (M))|F};[KP]SARR{[SA]|[TG]}E{M(Oxidation (M))|F} 3.7129;3.5595;2.995;1.5544;1.401;1.256;1.1387;0.83648;0.32632 -;+;-;-;-;-;-;-;- + 181 1 1.939 51396.3 1.0 2692 4367 7058 HBL1_DMSO_200M_050219_2,7061 HBL1_DMSO_200M_050219_2,7061,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7062 38.103 42.0 1555200.0 25 0 178500.0 + 21449 LPHHRVIEV 9 80 550.3225356483899 1098.6305183635798 2 550.3226196169853 MULTI CID FTMS 0 0 0 7058 1420411.5 0.3382593359320953 4 -0.1636543273925781 4 Unmodified _LPHHRVIEV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 43.77239144664712 0.0547478964384323 4 {I|L}PHH 4 5 55.918 0.0 0.0 5.0898 0.0 0.0 0.0 611.3523043268186 611.3523043268186 21.092145186756014 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 + {I|L}PHH 5.0898 + + 107 + 1 1.939 57955.4 1.0 2693 4367 7058 HBL1_DMSO_200M_050219_2,7062 HBL1_DMSO_200M_050219_2,7062,LPHHRVIEV True True LPHHRVIEV 38.102683 550.322619616985 850110864.0 7058.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;;nc|ENSG00000185164|Q5JPE7|NOMO2 5.377482096354167 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7063 38.104 44.0 1131800.0 25 0 151070.0 + 6812 EEAPSRPAL 9 69 485.2538040177107 968.4930551022214 2 485.2539245486259 MULTI CID FTMS 0 0 0 7058 1392754.625 0.1432570338944348 4 -0.1636543273925781 5 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 29.081581746732265 0.1611639662936252 4 EEAPSR[PA]{I|L} 9 0 + 39.6 0.0 0.0 4.0888 4.0888 82.849 0.0 0.0 0.0 18.33999355612812 1.0822685886482546 1.0822685886482546 39.59954981438067 0 0.4247425010840047 1.5228787452803376 0.0 0.0 + + EEAPSR[PA]{I|L} 4.0888 + + 95 + 1 1.939 43755.9 1.0 2694 4367 7058 HBL1_DMSO_200M_050219_2,7063 HBL1_DMSO_200M_050219_2,7063,EEAPSRPAL False True EEAPSRPAL 38.103894 485.253924548626 220140696.0 7058.0 nc|ENSG00000173349|Q587I9|SFT2D3 7.143882433573405 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7064 38.105 52.0 1108500.0 25 0 138500.0 + 5792 DPPPGSHVI 9 94 459.7377035282235 917.460854123247 2 459.7379333376884 MULTI CID FTMS 0 0 0 7058 950696.5 0.0968206317612763 59 -2.6416778564453125 6 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 34.10243960390752 0.1078313939113124 4 [DP]P 3 6 41.695 0.0 0.0 4.5446 0.0 0.0 0.0 605.304970063096 605.304970063096 30.012262311882765 0.0 0.0 0.0 0 1.0 2.0 0.4247425010840047 0.0 + [DP]P 4.5446 + + 111 1 1.939 49838.0 1.0 2695 4367 7058 HBL1_DMSO_200M_050219_2,7064 HBL1_DMSO_200M_050219_2,7064,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7065 38.107 52.0 884110.0 25 0 128080.0 + 45830 YYPDGNSQY 9 80 553.7245630101261 1105.434573087052 2 553.7256347537041 MULTI CID FTMS 0 0 0 7058 737395.1875 0.3282088477208275 -20 1.2049942016601562 7 Unmodified _YYPDGNSQY_ nc|ENSG00000141380|Q15532-2|SS18 12.531546534597751 0.4974689918368763 4 YYGSQ 5 4 48.015 0.0 0.0 4.3436 0.0 0.0 0.0 504.1768575931646 504.1768575931646 33.41129063296272 0.0 0.0 0.0 0 0.5 2.0 0.3807196863200844 0.0 YYGSQ 4.3436 - 148 1 1.939 37526.5 1.0 2696 4367 7058 HBL1_DMSO_200M_050219_2,7065 HBL1_DMSO_200M_050219_2,7065,YYPDGNSQY False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7066 38.108 63.0 1341400.0 25 0 162830.0 + 21992 LPPPGVRKI 9 67 326.2152667066333 975.6239707201 3 326.2149841189384 MULTI CID FTMS 0 0 0 7058 710491.9375 0.5062060371009419 -26 1.6232986450195312 8 Unmodified _LPPPGVRKI_ ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54566383-54570502:-|nuORF 20.453626601364224 0.2830276176381075 4 {I|L}PPPG 5 4 55.815 0.0 0.0 5.721 0.0 0.0 0.0 511.3383883111937 511.3383883111937 50.330918867322296 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + {I|L}PPPG 5.721 + + 38 + 1 1.939 71999.2 1.0 2697 4367 7058 HBL1_DMSO_200M_050219_2,7066 HBL1_DMSO_200M_050219_2,7066,LPPPGVRKI False True LPPPGVRKI 38.108133 326.214984118938 115767475.0 7058.0 ENSG00000067248|ENST00000251636|DHX29;;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;;ENST00000513447.1_1_5:54566383-54570502:-|nuORF 3.3724846045176187 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7067 38.112 191.0 301920.0 25 0 68674.0 25810 NKSAYNSYSWG 11 49 638.7840652414915 1275.5535775497829 2 638.7838012576103 MULTI CID FTMS 0 0 0 7058 252387.875 0.7712732005211845 -3 0.1423912048339843 9 Unmodified _NKSAYNSYSWG_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 10.799506525563784 0.8105043987015127 4 Y 1 10 11.99 0.0 0.0 0.93996 0.0 0.0 712.282619507624 397.1832898790565 1109.4659093866806 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + Y 0.93996 + + 31 + 1 1.939 47181.5 1.0 2698 4367 7058 HBL1_DMSO_200M_050219_2,7067 HBL1_DMSO_200M_050219_2,7067,NKSAYNSYSWG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7068 38.116 192.0 376050.0 25 0 30891.0 + 42741 VVDPNDPQM 9 105 515.728805267427 1029.443057601654 2 515.7298461794853 MULTI CID FTMS 0 0 0 7058 245496.15625 0.3570954467072157 -5 0.3841552734375 10 Oxidation (M) _VVDPNDPQM(Oxidation (M))_ ENSG00000151883|ENST00000281631|PARP8 41.8396318013385 0.0653578398400075 4 DPQ{M(Oxidation (M))|F} 4 5 27.581 0.0 0.0 2.6792 0.0 0.0 524.2579512557539 0.0 524.2579512557539 0.0 0.0328325774887616 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.6747425010840047 + DPQ{M(Oxidation (M))|F} 2.6792 + + 437 + 1 1.939 58968.4 1.0 2699 4367 7058 HBL1_DMSO_200M_050219_2,7068 HBL1_DMSO_200M_050219_2,7068,VVDPNDPQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7069 38.121 300.0 332290.0 25 0 53783.0 + 22375 LPSSAARCV 9 81 452.2391455550029 902.4637381768058 2 452.2392150759697 MULTI CID FTMS 0 0 0 7058 244388.953125 0.9872598362454152 -2 0.0811500549316406 11 Unmodified _LPSSAARCV_ ENSG00000105641|ENST00000222248|SLC5A5 21.53697664764585 0.2571576504437394 4 {I|L}PSSA 5 4 62.875 0.0 0.0 6.9671 0.0 0.0 0.0 444.2043856256469 444.2043856256469 54.776296993281406 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + {I|L}PSSA 6.9671 + + 57 + 1 1.939 82930.5 1.0 2700 4367 7058 HBL1_DMSO_200M_050219_2,7069 HBL1_DMSO_200M_050219_2,7069,LPSSAARCV False True LPSSAARCV 38.120983 452.23921507597 2222189.25 7058.0 ENSG00000105641|ENST00000222248|SLC5A5 4.263356685638428 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7070 38.127 310.0 351910.0 25 0 32315.0 + -1 PDLAGDMCI 9 126 504.2124590846895 1006.410365236179 2 504.2113525271416 MULTI CID FTMS 0 0 0 7058 140120.796875 0.688054937402616 1 -0.0734519958496093 12 Carbamidomethyl (C),Oxidation (M) _PDLAGDM(Oxidation (M))C(Carbamidomethyl (C))I_ REV__ENSG00000128815|ENST00000325239|WDFY4;REV__ENST00000374161.7_3_10:50011336-50031259:+|nuORF;REV__nc|ENSG00000128815|Q6ZS81-4|WDFY4;REV__nc|ENSG00000128815|Q6ZS81-5|WDFY4 12.531546534597751 0.4974689918368763 4 [DP]PV 4 -1 35.138 0.0 0.0 3.4914 0.0 0.0 0.0 595.1869209825259 595.1869209825259 18.861147182067903 0.0 0.0 0.0 0 1.0 2.0 0.2742275032520141 0.0 [DP]PV 3.4914 - 211 1 1.939 84224.7 1.0 2701 4367 7058 HBL1_DMSO_200M_050219_2,7070 HBL1_DMSO_200M_050219_2,7070,PDLAGDMCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7071 38.14 800.0 123360.0 25 0 10209.0 26050 NMPKFDSLWDY 11 93 708.3195810332 1414.6246091332 2 708.3200561404228 MULTI CID FTMS 0 0 0 7058 139795.078125 0.6507934406568334 1 -0.0734519958496093 13 Unmodified _NMPKFDSLWDY_ ENSG00000197928|ENST00000598513|ZNF677 15.248480904072842 0.7179608125786238 4 [MN]PN{I|L}NEEQR[NG] 12 9 + 96.038 0.0 0.0 6.789 6.789 87.592 0.0 0.0 0.0 71.30188814261538 2.9120359271378646 2.9120359271378646 9.098233696509112 0 0.7614393726401688 1.5228787452803376 0.3807196863200844 2.309894379144197 [MN]PN{I|L}NEEQR[NG];[MN]PGG{I|L}NEEQR[NG];[MN]PN{I|L}GGEEQR[NG];[MN]PN{I|L}NEE[AG]R[NG];[MN]PGG{I|L}GGEEQR[NG];[MN]PN{I|L}GGEE[AG]R[NG];[MN]PGG{I|L}NEE[AG]R[NG];[MN]PN{I|L}NEHHY{M(Oxidation (M))|F};[MN]PN{I|L}N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QY{M(Oxidation (M))|F};[MN]PGG{I|L}NEHHY{M(Oxidation (M))|F} 6.789;6.1458;6.1458;6.1458;5.5045;5.5045;5.5045;5.3146;4.7082;4.6693 -;-;-;-;-;-;-;-;-;- 587 + 1 1.939 71611.1 0.6200000047683716 2702 4367 7058 HBL1_DMSO_200M_050219_2,7071 HBL1_DMSO_200M_050219_2,7071,NMPKFDSLWDY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7072 38.154 800.0 234840.0 25 0 16451.0 + 22092 LPPPVAVRK 9 168 488.8188640373592 975.6231751415183 2 488.8196899294853 MULTI CID FTMS 0 0 0 7058 121279.25 0.3678911865904531 -28 1.7009658813476562 14 Unmodified _LPPPVAVRK_ ENSG00000184271|ENST00000333640|POU6F1;nc|ENSG00000184271|Q14863|POU6F1 21.74664581756881 0.2544899275067181 4 {I|L}PPP 4 5 56.637 0.0 0.0 5.8052 0.0 0.0 0.0 568.3580416315061 568.3580416315061 38.97804978834373 0.0 0.0 0.0 0 0.6203715150305281 2.0 0.0 0.0 + {I|L}PPP 5.8052 + + 372 + 1 1.939 142753.2 0.5899999737739563 2703 4367 7058 HBL1_DMSO_200M_050219_2,7072 HBL1_DMSO_200M_050219_2,7072,LPPPVAVRK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7073 38.168 800.0 194220.0 25 0 7575.6 + -1 NMLYSDMF 8 181 526.7049316084529 1051.3953102837056 2 526.7052490115166 MULTI CID FTMS 0 0 0 7058 96251.2890625 0.3029813307961937 -2 0.0811500549316406 15 2 Oxidation (M) _NM(Oxidation (M))LYSDM(Oxidation (M))F_ REV__ENSG00000136936|ENST00000375128|XPA 14.581692164780916 0.6954967302934248 4 VVDM 4 -1 45.501 0.0 0.0 4.3276 0.0 0.0 0.0 604.1670626275999 604.1670626275999 21.53859533540446 0.0 0.0 0.0 0 0.4838855026932703 1.6989700043360187 0.0 0.0 VVDM 4.3276 - 738 + 1 1.939 129145.6 0.550000011920929 2704 4367 7058 HBL1_DMSO_200M_050219_2,7073 HBL1_DMSO_200M_050219_2,7073,NMLYSDMF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7075 38.185 800.0 158050.0 25 0 15144.0 -1 AAAAGHMKLVC 11 131 564.7865689537797 1127.5585849743593 2 564.7865478396416 MULTI CID FTMS 0 0 0 7074 59909.3359375 0.1861584440402749 4 -0.12713623046875 1 Carbamidomethyl (C) _AAAAGHMKLVC(Carbamidomethyl (C))_ ENSG00000115183|ENST00000263635|TANC1;nc|ENSG00000115183|Q9C0D5-2|TANC1 6.2057823575117 0.8458686499021061 4 PQD 3 -1 27.747 0.0 0.0 2.4608 0.0 0.0 170.06926590624124 614.328102648865 784.3973685551061 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.7302046884880937 PQD 2.4608 - 203 + 1 1.933 100935.3 0.8700000047683716 2705 4368 7074 HBL1_DMSO_200M_050219_2,7075 HBL1_DMSO_200M_050219_2,7075,AAAAGHMKLVC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7076 38.187 49.0 1313400.0 25 0 76532.0 + 32316 RYIGKTMDY 9 89 573.7839885115143 1145.5534240898285 2 573.7846557497978 MULTI CID FTMS 0 0 0 7074 970475.25 0.4109851879574669 -5 0.3464508056640625 2 Unmodified _RYIGKTMDY_ ENSG00000143314|ENST00000361531|MRPL24;ENST00000478899.1_1_1:156707192-156707995:-|nuORF 31.26834338654808 0.1333407332142048 4 [YR]{I|L}GKTMDY 9 0 + 51.648 0.0 0.0 4.5086 4.5086 76.609 0.0 0.0 0.0 3.65279269351241 31.93865255602468 3.65279269351241 6.7609125905568135 0 0.8807196863200843 0.0 0.4247425010840047 0.0 + + [YR]{I|L}GKTMDY;[YR]{I|L}GKTDMY;[YR]{I|L}GKDTMY;YSY[EP]RK{[CT]|[{M(Oxidation (M))|F}G]} 4.5086;3.9184;3.2848;2.5616 +;-;-;- + 233 1 1.933 55018.9 1.0 2706 4368 7074 HBL1_DMSO_200M_050219_2,7076 HBL1_DMSO_200M_050219_2,7076,RYIGKTMDY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7077 38.189 93.0 696110.0 25 0 81528.0 + 35325 SSVENIQRV 9 92 516.2778100310702 1030.5410671289403 2 516.2780639529228 MULTI CID FTMS 0 0 0 7074 483840.75 0.4861901423152026 -4 0.2158432006835937 3 Unmodified _SSVENIQRV_ ENSG00000173801|ENST00000393931|JUP 71.92227651296345 0.0203558744033348 4 {[CA]|SS}VE{I|L}NQ[RV] 9 2 + 61.092 0.0 0.0 5.9282 5.9282 73.229 0.0 0.0 0.0 7.147642715192504 3.979400086720375 3.979400086720375 0.796896906561031 0 1.411954370472159 0.0 0.3807196863200844 0.7302046884880937 {[CA]|SS}VE{I|L}NQ[RV];{[CA]|SS}VEN{I|L}Q[RV];{[CA]|SS}VE{I|L}N[RV]Q;{[CA]|SS}VEN{I|L}[RV]Q;{[CA]|SS}VE{I|L}N[AG][RV];{[CA]|SS}VE{I|L}GGQ[RV];{[CA]|SS}VEN{I|L}[AG][RV];{[CA]|SS}VEGG{I|L}Q[RV];{[CA]|SS}VE{I|L}GG[RV]Q;{[CA]|SS}VEGG{I|L}[RV]Q 5.9282;5.8509;5.542;5.4647;5.0347;5.0347;4.9573;4.9573;4.6485;4.5712 -;+;-;-;-;-;-;-;-;- + 382 + 1 1.933 57563.5 1.0 2707 4368 7074 HBL1_DMSO_200M_050219_2,7077 HBL1_DMSO_200M_050219_2,7077,SSVENIQRV True True SSVENIQRV 38.188864 516.278063952923 7065975.5 7074.0 ENSG00000173801|ENST00000393931|JUP 4.118585268656413 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7078 38.195 322.0 261320.0 25 0 23267.0 + 5821 DPRTPTAPAV 10 112 512.7750587658492 1023.5355645984984 2 512.7748290896416 MULTI CID FTMS 0 0 0 7074 220559.359375 0.8233763226355884 -3 0.15460205078125 4 Unmodified _DPRTPTAPAV_ ENSG00000167978|ENST00000301740|SRRM2 30.63653989081413 0.2803493085145199 4 [PA][DV]{[VA]|[{I|L}G]}ADPAV 11 6 + 43.306 0.0 0.0 4.2311 4.2311 65.784 0.0 0.0 0.0 9.494110626068384 18.244723259985385 9.494110626068384 0.5551732784983088 0 1.079689690656103 1.6989700043360187 0.7059771852360797 0.0 [PA][DV]{[VA]|[{I|L}G]}ADPAV;[PA][DV][Q{I|L}]DPAV;[PA][DV]{[VA]|[{I|L}G]}WPAV;[DP]{[VA]|[{I|L}G]}{[VA]|[{I|L}G]}ADPAV;[DP]{[VA]|[{I|L}G]}[Q{I|L}]DPAV;[PA]A[KT]H{[ET]|[MV]}AV;[DP]{[VA]|[{I|L}G]}{[VA]|[{I|L}G]}WPAV;[PS][TP]{[VA]|[{I|L}G]}ADPAV;[PS][TP][Q{I|L}]DPAV;[PA]A[KT]H[VS]DV 4.2311;4.1768;3.2708;2.9195;2.8653;2.0494;1.9593;1.5537;1.4995;1.0114 -;-;-;-;-;-;-;-;-;- 287 1 1.933 73909.8 1.0 2708 4368 7074 HBL1_DMSO_200M_050219_2,7078 HBL1_DMSO_200M_050219_2,7078,DPRTPTAPAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7079 38.199 212.0 317970.0 25 0 41892.0 + 7426 EGLRALDV 8 89 436.7461371192473 871.4777213052946 2 436.7450134158134 MULTI CID FTMS 0 0 0 7074 205649.65625 0.7007939746611354 -3 0.15460205078125 5 Unmodified _EGLRALDV_ REV__ENSG00000168014|ENST00000334126|C2CD3;REV__nc|ENSG00000168014|Q4AC94-1|C2CD3;REV__nc|ENSG00000168014|Q4AC94-2|C2CD3;REV__nc|ENSG00000168014|Q4AC94-3|C2CD3;REV__nc|ENSG00000168014|Q4AC94-4|C2CD3 32.30548876998284 0.3644845974844379 4 {[DA]|[EG]}{I|L}R 4 -1 35.767 0.0 0.0 4.1042 0.0 0.0 0.0 413.213139356329 413.213139356329 17.139113082429088 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.3494850021680094 {[DA]|[EG]}{I|L}R 4.1042 + + 313 1 1.933 57535.1 1.0 2709 4368 7074 HBL1_DMSO_200M_050219_2,7079 HBL1_DMSO_200M_050219_2,7079,EGLRALDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7080 38.206 380.0 391470.0 25 0 26551.0 + 32409 RYYDDPREY 9 140 426.1912815609922 1275.5520152831766 3 426.1910888552666 MULTI CID FTMS 0 0 0 7074 200774.53125 0.8395583605365878 -1 0.0734519958496093 6 Unmodified _RYYDDPREY_ ENSG00000065526|ENST00000375759|SPEN 72.96794272382148 0.0199516581995792 4 [YR]YDD 5 4 52.05 0.0 0.0 4.0806 0.0 0.0 0.0 560.2476149307342 560.2476149307342 32.86880604026195 0.0 0.0 0.0 0 1.274227503252014 1.3979400086720375 0.3494850021680094 0.5891368308784531 + [YR]YDD 4.0806 + + 625 1 1.933 127383.1 1.0 2710 4368 7074 HBL1_DMSO_200M_050219_2,7080 HBL1_DMSO_200M_050219_2,7080,RYYDDPREY True True RYYDDPREY 38.205549 426.191088855267 14988522.5 7074.0 ENSG00000065526|ENST00000375759|SPEN 7.188513120015462 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7082 38.215 416.0 344210.0 25 0 48285.0 + 36349 SYPDNHQEF 9 126 568.7358753689622 1135.4571978047245 2 568.7360717654228 MULTI CID FTMS 0 0 0 7081 320551.34375 0.908932804152633 -4 0.1920700073242187 1 Unmodified _SYPDNHQEF_ ENSG00000169967|ENST00000682094|MAP3K2 53.832793166522166 0.0319663582346103 4 {[{M(Oxidation (M))|F}C]|[YS]}PDNHAEG{M(Oxidation (M))|F} 10 2 + 54.59 0.0 0.0 4.8077 4.8077 82.305 0.0 0.0 0.0 23.19258387748888 9.09083922659839 9.09083922659839 11.115713463802322 0 0.4247425010840047 0.0 0.6989700043360187 1.1237125054200234 {[{M(Oxidation (M))|F}C]|[YS]}PDNHAEG{M(Oxidation (M))|F};[DP]NHQE{M(Oxidation (M))|F}SY;[DP]N[{M(Oxidation (M))|F}T]VDP[MT];[DP]NHQ{M(Oxidation (M))|F}ESY;YYHQE{M(Oxidation (M))|F}SY;{[{M(Oxidation (M))|F}C]|[YS]}PDNHAT[MT];[DP]GGHQE{M(Oxidation (M))|F}SY;[DP]NH[AG]E{M(Oxidation (M))|F}SY;{[{M(Oxidation (M))|F}C]|[YS]}PDGGHAEG{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][WP]NDP[MT] 4.8077;3.8288;3.5105;3.1768;3.0815;3.0474;3.0178;3.0178;3.011;2.9136 -;-;-;-;-;-;-;-;-;- 1039 + 1 1.933 113327.0 1.0 2711 4369 7081 HBL1_DMSO_200M_050219_2,7082 HBL1_DMSO_200M_050219_2,7082,SYPDNHQEF True True SYPDNHQEF 38.215222 568.736071765423 14465426.0 7081.0 ENSG00000169967|ENST00000682094|MAP3K2 8.75080649058024 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7083 38.218 148.0 461570.0 25 0 110790.0 -1 0 84 492.3016674425531 491.2943909759531 1 492.3015930056572 MULTI CID FTMS 0 0 0 7081 622634.125 0.46026393869644 5 -0.1770248413085937 2 4 A 1 -1 9.9148 0.0 0.0 2.0181 0.0 0.0 402.2461483385492 0.0 402.2461483385492 0.0 9.914833303506096 0.0 0.0 0 0.0 0.0 0.0 0.0 A 2.0181 - 8 + 1 1.933 57778.3 1.0 2712 4369 7081 HBL1_DMSO_200M_050219_2,7083 HBL1_DMSO_200M_050219_2,7083, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7085 38.223 4.9 9659500.0 25 0 750510.0 + 42736 VVDPNDPQM 9 65 507.731820046605 1013.44908716001 2 507.7321655154228 MULTI CID FTMS 0 0 0 7084 12190835.0 0.9261656466373828 -1 0.0126113891601562 1 Unmodified _VVDPNDPQM_ ENSG00000151883|ENST00000281631|PARP8 37.97399986684836 0.0865783450051559 4 DPQM 4 5 31.943 0.0 0.0 3.1519 0.0 0.0 524.2581519566882 0.0 524.2581519566882 0.0 0.0012252678339983 0.0 0.0 0 0.5 0.0 0.0 0.7302046884880937 + DPQM 3.1519 + + 171 + 1 1.933 44545.8 1.0 2713 4370 7084 HBL1_DMSO_200M_050219_2,7085 HBL1_DMSO_200M_050219_2,7085,VVDPNDPQM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7086 38.226 180.0 289920.0 25 0 16735.0 + 12217 GQTPVFSKA 9 102 467.7535985949904 933.4926442567807 2 467.7535278201103 MULTI CID FTMS 0 0 0 7084 244302.34375 0.6428118836174332 4 -0.1644134521484375 2 Unmodified _GQTPVFSKA_ ENSG00000142676|ENST00000643754|RPL11;ENST00000482370.1_1_1:24019089-24022860:+|nuORF;nc|ENSG00000142676|P62913-2|RPL11 27.22323531849824 0.1848086127304535 4 {[QG]|[NA]}TPV{M(Oxidation (M))|F}SKA 9 0 + 31.392 0.0 0.0 3.3629 3.3629 78.076 0.0 0.0 0.0 17.280642935275704 5.985994592184557 5.985994592184557 12.814922407731393 0 1.0 0.0 0.0 0.0 + + {[QG]|[NA]}TPV{M(Oxidation (M))|F}SKA;{[QG]|[NA]}{I|L}APYSKA;{[QG]|[NA]}TP[KG][Y{I|L}]A;{[QG]|[NA]}TVV[MT]KA;{[QG]|[NA]}T{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[{I|L}A]SV;{[QG]|[NA]}TVV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GV;{[QG]|[NA]}T{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[{I|L}T]GV 3.3629;1.9901;1.3842;0.85047;0.53754;0.44317;0.33198 +;-;-;-;-;-;- + 327 + 1 1.933 45814.3 1.0 2714 4370 7084 HBL1_DMSO_200M_050219_2,7086 HBL1_DMSO_200M_050219_2,7086,GQTPVFSKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7087 38.231 236.0 258580.0 25 0 16865.0 + 21834 LPNPTKPNNV 10 100 547.303947912225 1092.59334289125 2 547.3040649294853 MULTI CID FTMS 0 0 0 7084 227510.25 0.848141610900179 -4 0.1418113708496093 3 Unmodified _LPNPTKPNNV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 28.49450938151212 0.328477364964909 4 {I|L}PNPTK[RH]M 9 4 + 67.885 0.0 0.0 6.2132 6.2132 86.453 0.0 0.0 0.0 38.36024314562721 10.457574905606748 10.457574905606748 9.208187539523747 0 0.8494850021680094 1.3010299956639813 0.0 0.3807196863200844 {I|L}PNPTK[RH]M;{I|L}PGGPTK[RH]M;[{M(Oxidation (M))|F}V][Y{I|L}]K[RH]M 6.2132;5.3705;0.1468 -;-;- 294 + 1 1.933 57470.4 1.0 2715 4370 7084 HBL1_DMSO_200M_050219_2,7087 HBL1_DMSO_200M_050219_2,7087,LPNPTKPNNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7088 38.238 414.0 179560.0 25 0 9744.8 + 24012 HVYADQPHI 9 114 540.2752108748781 1078.535868816556 2 540.2695190310478 MULTI CID FTMS 0 0 0 7084 161243.203125 0.091125791105875 10 -0.4435272216796875 4 Unmodified _LVYDLFFY_ ENSG00000100439|ENST00000428304|ABHD4 20.871210003555333 0.6025813472596342 4 {I|L}YVD 4 6 31.191 0.0 0.0 2.8919 0.0 0.0 0.0 585.2686251275999 585.2686251275999 2.758665443768461 0.0 0.0 0.0 0 0.5 0.0 0.805462187404089 0.0 {I|L}YVD 2.8919 - 228 + 1 1.933 64968.4 1.0 2716 4370 7084 HBL1_DMSO_200M_050219_2,7088 HBL1_DMSO_200M_050219_2,7088,LVYDLFFY False False HVYADQPHI 38.237976 540.269519031048 1557499.625 7084.0 ENSG00000100439|ENST00000428304|ABHD4 0.5297396232684454 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7089 38.244 358.0 282290.0 25 0 34913.0 + 16401 IYQSKVREL 9 102 379.2206432961651 1134.6401004886957 3 379.2207519412041 MULTI CID FTMS 0 0 0 7084 145296.328125 0.0074847135479314 -7 0.3965301513671875 5 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 33.4449034751529 0.1114409586740657 4 {I|L}YQSKV 6 3 62.691 0.0 0.0 5.5252 0.0 0.0 0.0 413.2166231744751 413.2166231744751 49.90422239681987 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.7302046884880937 0.5 + {I|L}YQSKV 5.5252 + + 124 + 1 1.933 83648.8 1.0 2717 4370 7084 HBL1_DMSO_200M_050219_2,7089 HBL1_DMSO_200M_050219_2,7089,IYQSKVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7090 38.258 800.0 88036.0 25 0 13214.0 -1 0 52 1123.3677939466384 2244.721034960077 2 1123.868579089642 MULTI CID FTMS 0 0 0 7084 111776.234375 0.7765564310148889 -4 0.1418113708496093 6 4 D 1 -1 3.9794 0.0 0.0 0.17728 0.0 0.0 1722.5449618173018 404.1203475145304 2126.6653093318323 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.17728 - 24 + 1 1.933 60086.7 0.4199999868869781 2718 4370 7084 HBL1_DMSO_200M_050219_2,7090 HBL1_DMSO_200M_050219_2,7090, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7092 38.274 776.0 225300.0 25 0 17326.0 + 43796 YYEVHKEL 8 184 360.51774177677737 1078.5313959305322 3 360.8502075076103 MULTI CID FTMS 0 0 0 7091 84143.2734375 0.1334570707023145 9 -0.4034042358398437 1 Unmodified _YERNRGER_ ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1 8.593279151180031 0.7721714526254883 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PA]{I|L}VEY[SG] 10 8 + 29.142 0.0 0.0 2.702 2.702 69.369 0.0 0.0 0.0 7.754537344402905 15.039237471316296 7.754537344402905 4.783474859079391 0 0.0 1.6989700043360187 0.4247425010840047 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PA]{I|L}VEY[SG];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PA]V{I|L}EY[SG];{[QN]|[E{I|L}]|[KN]}[TP]A{I|L}EY[SG];[YE][KP]AS[Q{I|L}][SG];[VP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{I|L}EY[SG];[YE][KP]RR{[QC]|[C(Carbamidomethyl (C))A]};[VP]{[ES]|[DT]|[{I|L}C]}{I|L}VEY[SG];{[MS]|[{M(Oxidation (M))|F}A]}{[HG]|PP}{I|L}VEY[SG];[HK][{M(Oxidation (M))|F}V]{I|L}E[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[VP]{[ES]|[DT]|[{I|L}C]}V{I|L}EY[SG] 2.702;2.2585;1.506;0.91898;0.87572;0.71328;0.67116;0.57872;0.28941;0.22764 -;-;-;-;-;-;-;-;-;- 565 1 1.933 143932.2 1.0 2719 4371 7091 HBL1_DMSO_200M_050219_2,7092 HBL1_DMSO_200M_050219_2,7092,YERNRGER False False YYEVHKEL 38.273947 360.85020750761 9007361.0 7091.0 ENSG00000198901|ENST00000394249|PRC1;;nc|ENSG00000198901|O43663-2|PRC1;;nc|ENSG00000198901|O43663-3|PRC1;;nc|ENSG00000198901|O43663-4|PRC1 2.026094675064087 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7093 38.277 146.0 406880.0 25 0 32326.0 + 12050 GQDVGRYQV 9 88 511.2566672775585 1020.498781621917 2 511.2570983767509 MULTI CID FTMS 0 0 0 7091 302733.3125 0.0363265451647243 -5 0.1819343566894531 2 Unmodified _GQDVGRYQV_ ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF 37.97399986684836 0.0865783450051559 4 {[QG]|[NA]}DVV 5 4 38.409 0.0 0.0 3.7637 0.0 0.0 0.0 519.2331026666624 519.2331026666624 21.16838189970857 0.0 0.0 0.0 0 1.0 0.7695510786217261 0.0 0.0 {[QG]|[NA]}DVV 3.7637 - 186 + 1 1.933 50203.2 1.0 2720 4371 7091 HBL1_DMSO_200M_050219_2,7093 HBL1_DMSO_200M_050219_2,7093,GQDVGRYQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7094 38.281 239.0 297500.0 25 0 27211.0 -1 KNMLATPIM 9 103 525.7712047943236 1049.527856655447 2 526.7755004763603 MULTI CID FTMS 0 0 0 7091 217213.40625 0.6032745307734863 -4 0.1636543273925781 3 2 Oxidation (M) _KNM(Oxidation (M))LATPIM(Oxidation (M))_ ENSG00000133256|ENST00000496514|PDE6B;nc|ENSG00000133256|P35913-2|PDE6B 15.847184025352805 0.4077185912009129 4 VV{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}V 7 -1 31.884 0.0 0.0 3.0379 0.0 0.0 0.0 273.09295610296584 273.09295610296584 12.419847493669849 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.0044321917401078 0.0 VV{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}V 3.0379 - 289 1 1.933 65378.9 1.0 2721 4371 7091 HBL1_DMSO_200M_050219_2,7094 HBL1_DMSO_200M_050219_2,7094,KNMLATPIM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7095 38.295 800.0 82421.0 25 0 5200.0 -1 ENCGICRMAF 10 98 629.260429453468 1256.5063059737358 2 629.2610961794853 MULTI CID FTMS 0 0 0 7091 87423.625 0.7631694563737014 -5 0.1819343566894531 4 2 Carbamidomethyl (C) _ENC(Carbamidomethyl (C))GIC(Carbamidomethyl (C))RMAF_ ENSG00000141552|ENST00000344877|ANAPC11;nc|ENSG00000141552|Q9NYG5-2|ANAPC11 13.90604991867851 0.6142120002215601 4 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F} 11 -1 + 68.395 0.0 0.0 5.4433 5.4433 77.946 0.0 0.0 0.0 0.4824027371879111 40.74417185552796 0.4824027371879111 4.630047760583175 0 0.5 0.0 0.868415180652539 0.75 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}EMGAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQNA{M(Oxidation (M))|F};[AG]S{[CA]|SS}[CS]AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]A[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQQGGA{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}EMQQQNA{M(Oxidation (M))|F};[AG]S{[CA]|SS}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQNA{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}EMGAQQGGA{M(Oxidation (M))|F} 5.4433;5.0748;4.9199;4.9196;4.7168;4.7168;4.7168;4.5514;4.391;4.3483 -;-;-;-;-;-;-;-;-;- 1829 1 1.933 56068.3 0.550000011920929 2722 4371 7091 HBL1_DMSO_200M_050219_2,7095 HBL1_DMSO_200M_050219_2,7095,ENCGICRMAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7097 38.3 16.0 2721000.0 25 0 285610.0 -1 RAWDMRYYMNQ 11 56 775.3369604954394 1548.6593680576786 2 775.3376342654228 MULTI CID FTMS 0 0 0 7096 3347761.0 1.0 0 0.0 1 Oxidation (M) _RAWDM(Oxidation (M))RYYMNQ_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF;ENST00000591149.5_1_19:2807001-2808381:+|nuORF 1.3295316138638542 0.8688751186870782 4 EAQQNA{M(Oxidation (M))|F}YQ 9 -1 67.797 0.0 0.0 4.3778 0.0 0.0 451.1814747541032 0.0 451.1814747541032 0.0 47.55449080957064 0.0 0.0 0 0.8935078169319297 0.0 0.0 1.274227503252014 EAQQNA{M(Oxidation (M))|F}YQ 4.3778 - 806 1 1.933 39690.5 1.0 2723 4372 7096 HBL1_DMSO_200M_050219_2,7097 HBL1_DMSO_200M_050219_2,7097,RAWDMRYYMNQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7098 38.301 32.0 1524100.0 25 0 137470.0 + 21447 LPHHRVIEV 9 83 367.21764255817567 1098.631098274727 3 367.2173034548759 MULTI CID FTMS 0 0 0 7096 1531523.0 0.0718736713073725 9 -0.4093055725097656 2 Unmodified _LPHHRVIEV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 16.149105407346934 0.3995459350917656 4 {I|L}PHH 4 5 33.945 0.0 0.0 3.0897 0.0 0.0 0.0 611.3534890443391 611.3534890443391 18.460244700585022 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 + {I|L}PHH 3.0897 + + 131 + 1 1.933 48302.4 1.0 2724 4372 7096 HBL1_DMSO_200M_050219_2,7098 HBL1_DMSO_200M_050219_2,7098,LPHHRVIEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7099 38.304 127.0 936390.0 25 0 52721.0 + 16405 IYQSKVREL 9 103 568.3269742749021 1134.639395616604 2 568.3274413943291 MULTI CID FTMS 0 0 0 7096 623902.0625 0.0376974563152939 -4 0.12713623046875 3 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 57.24910588100465 0.0276051374632116 4 {I|L}YQSKV 6 3 88.123 0.0 0.0 7.7666 0.0 0.0 0.0 413.215487393406 413.215487393406 74.3324578640332 0.0 0.0 0.0 0 1.1307196863200843 2.0 0.7302046884880937 0.7742275032520141 + {I|L}YQSKV 7.7666 + + 234 + 1 1.933 92548.8 1.0 2725 4372 7096 HBL1_DMSO_200M_050219_2,7099 HBL1_DMSO_200M_050219_2,7099,IYQSKVREL True True IYQSKVREL 38.303517 568.327441394329 993486656.0 7096.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 5.205156564712524 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7100 38.307 204.0 431080.0 25 0 25428.0 + 8190 EPSLRAPDL 9 114 499.2685869815552 996.5226210299104 2 499.2676269412041 MULTI CID FTMS 0 0 0 7096 342898.4375 1.0 0 0.0 4 Unmodified _EPSLRAPDL_ REV__ENSG00000187690|ENST00000342995|EZHIP 30.63653989081413 0.1413794767160703 4 HAME 4 -1 44.641 0.0 0.0 4.4797 0.0 0.0 0.0 525.3168383078594 525.3168383078594 -0.0034068823872246 0.0 -0.0034068823872246 0.0 0 0.5 1.3979400086720375 0.0 0.0 HAME 4.4797 - 334 + 1 1.933 72901.1 1.0 2726 4372 7096 HBL1_DMSO_200M_050219_2,7100 HBL1_DMSO_200M_050219_2,7100,EPSLRAPDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7101 38.312 274.0 352440.0 25 0 25966.0 + 26100 NPKFNDPHV 9 134 534.266841514056 1066.5191300949118 2 534.2668945193291 MULTI CID FTMS 0 0 0 7096 235598.59375 0.981879301005914 -2 0.077056884765625 5 Unmodified _NPKFNDPHV_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000480835.1_1_2:96943505-96944085:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 37.97399986684836 0.0865783450051559 4 [NP]K{M(Oxidation (M))|F}DN 6 4 28.061 0.0 0.0 2.6311 0.0 0.0 0.0 348.16565949224474 348.16565949224474 13.90408391974576 0.0 0.0 0.0 0 0.9247425010840048 0.619788758288394 0.3252574989159953 1.0189301784845295 [NP]K{M(Oxidation (M))|F}DN 2.6311 - 318 1 1.933 81940.0 1.0 2727 4372 7096 HBL1_DMSO_200M_050219_2,7101 HBL1_DMSO_200M_050219_2,7101,NPKFNDPHV True True NPKFNDPHV 38.312463 534.266894519329 2114176.75 7096.0 ENST00000480835.1_1_2:96943505-96944085:-|nuORF;;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 6.2904408772786455 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7102 38.321 506.0 129140.0 25 0 11843.0 -1 LQDAGYYQC 9 119 559.2341690631539 1116.4537851931077 2 559.2341186404228 MULTI CID FTMS 0 0 0 7096 158437.71875 0.5979089960178372 -8 0.3429794311523437 6 Carbamidomethyl (C) _LQDAGYYQC(Carbamidomethyl (C))_ ENSG00000103742|ENST00000352385|IGDCC4;ENST00000559327.1_1_15:65676349-65688574:-|nuORF;nc|ENSG00000103742|Q8TDY8-2|IGDCC4 12.240655878213236 0.5053430591993562 4 [YQ]{I|L}ENY[C(Carbamidomethyl (C))Q] 8 -1 + 36.049 0.0 0.0 3.2289 3.2289 71.376 0.0 0.0 0.0 5.641395878311322 20.564338470346897 5.641395878311322 5.832358973952264 0 0.3054621874040891 0.0 0.0 1.2059771852360797 [YQ]{I|L}ENY[C(Carbamidomethyl (C))Q];[AG]Y{I|L}ENY[C(Carbamidomethyl (C))Q];{[VA]|[{I|L}G]}AYENY[C(Carbamidomethyl (C))Q];{[VA]|[{I|L}G]}EG[YQ]Y[C(Carbamidomethyl (C))Q];[YQ]{I|L}EGGY[C(Carbamidomethyl (C))Q];{[VA]|[{I|L}G]}AD[YQ]Y[C(Carbamidomethyl (C))Q];{[QN]|[E{I|L}]|[KN]}N[YQ]Y[C(Carbamidomethyl (C))Q];[Q{I|L}]YENY[C(Carbamidomethyl (C))Q];{[QN]|[E{I|L}]|[KN]}GG[YQ]Y[C(Carbamidomethyl (C))Q];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[YQ]Y[C(Carbamidomethyl (C))Q] 3.2289;2.7065;2.63;2.5163;2.3993;2.2467;2.015;1.911;1.8383;1.7233 -;-;-;-;-;-;-;-;-;- 536 1 1.933 54705.6 1.0 2728 4372 7096 HBL1_DMSO_200M_050219_2,7102 HBL1_DMSO_200M_050219_2,7102,LQDAGYYQC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7103 38.327 286.0 289070.0 25 0 27231.0 + + 7487 DAVTAREAI 9 114 473.25424762556486 944.4939423179296 2 473.2535888552666 MULTI CID FTMS 0 0 0 7096 130933.1953125 0.2734512556132774 -3 0.0896682739257812 7 Unmodified _EGVLTAWGL_ ENSG00000132128|ENST00000617190|LRRC41;ENST00000472710.2_1_1:46744539-46744996:-|nuORF 26.88365393820708 0.1891292719743517 4 {[DA]|[EG]}VW[WR]{I|L} 7 -1 + 48.996 0.0 0.0 5.1876 5.1876 83.93 0.0 0.0 0.0 33.824858504146675 4.788107009300617 4.788107009300617 11.091444694250676 0 1.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}VW[WR]{I|L};{[DA]|[EG]}VTA{[RE]|[WV]}A{I|L};WV{[DA]|[EG]}[WR]{I|L};{[DA]|[EG]}V{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG]V 5.1876;4.0132;3.3888;2.3655 -;-;-;- 197 + 1 1.933 68845.9 1.0 2729 4372 7096 HBL1_DMSO_200M_050219_2,7103 HBL1_DMSO_200M_050219_2,7103,EGVLTAWGL False False DAVTAREAI 38.326634 473.253588855267 3123084.5 7096.0 ENSG00000132128|ENST00000617190|LRRC41;;ENST00000472710.2_1_1:46744539-46744996:-|nuORF 5.005956967671712 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7104 38.34 800.0 159590.0 25 0 49875.0 -1 0 131 496.2024015308072 495.1951250642072 1 496.2025634646416 MULTI CID FTMS 0 0 0 7096 113415.9765625 0.5222943275483176 6 -0.3161430358886719 8 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DQ 4 -1 + 32.396 0.0 0.0 6.542 6.542 92.29 0.0 0.0 0.0 17.171161774193564 9.719712763997563 9.719712763997563 31.47276491447352 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DQ;[AG]S{[{M(Oxidation (M))|F}D]|MM} 6.542;0.18639 -;- 56 1 1.933 98585.9 0.5699999928474426 2730 4372 7096 HBL1_DMSO_200M_050219_2,7104 HBL1_DMSO_200M_050219_2,7104, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7106 38.358 800.0 98693.0 25 0 8418.3 -1 RYIGKTMDY 9 105 581.7814472534268 1161.5483415736535 2 581.7826415896416 MULTI CID FTMS 0 0 0 7105 98674.984375 0.9454283467614112 1 -0.0419883728027343 1 Oxidation (M) _RYIGKTM(Oxidation (M))DY_ ENSG00000143314|ENST00000361531|MRPL24;ENST00000478899.1_1_1:156707192-156707995:-|nuORF 36.506200033944 0.094635877243972 4 [YR]{I|L}GKT{M(Oxidation (M))|F}DY 9 -1 + 30.995 0.0 0.0 2.6684 2.6684 77.234 0.0 0.0 0.0 2.922152515121222 14.000153727075148 2.922152515121222 15.313119813491198 0 1.2856668758921828 0.0 0.4247425010840047 0.0 [YR]{I|L}GKT{M(Oxidation (M))|F}DY;[{M(Oxidation (M))|F}T][K{I|L}]KT{M(Oxidation (M))|F}DY;[MN]DT{[HG]|PP}KK[MT] 2.6684;1.3501;0.76769 +;-;- + 142 1 1.933 66267.4 0.550000011920929 2731 4373 7105 HBL1_DMSO_200M_050219_2,7106 HBL1_DMSO_200M_050219_2,7106,RYIGKTMDY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7107 38.363 325.0 426930.0 25 0 43852.0 + -1 VVDERSDGC 9 119 518.7224807113479 1035.4304084894957 2 518.7228271365166 MULTI CID FTMS 0 0 0 7105 278511.5625 0.9978066406693894 4 -0.2285194396972656 2 Carbamidomethyl (C) _VVDERSDGC(Carbamidomethyl (C))_ REV__ENSG00000159733|ENST00000290974|ZFYVE28;REV__nc|ENSG00000159733|Q9HCC9-2|ZFYVE28;REV__nc|ENSG00000159733|Q9HCC9-3|ZFYVE28;REV__nc|ENSG00000159733|Q9HCC9-4|ZFYVE28;REV__nc|ENSG00000159733|Q9HCC9-5|ZFYVE28 24.020572477871973 0.2255576514309169 4 VVDMKD 6 -1 69.756 0.0 0.0 6.7369 0.0 0.0 0.0 345.0826510065063 345.0826510065063 50.72895495712153 0.0 0.0 0.0 0 0.75 2.0 0.5 0.7614393726401688 VVDMKD 6.7369 - 254 + 1 1.933 107723.7 1.0 2732 4373 7105 HBL1_DMSO_200M_050219_2,7107 HBL1_DMSO_200M_050219_2,7107,VVDERSDGC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7108 38.373 571.0 269140.0 25 0 32634.0 + 197 AAPPGPKD 8 164 376.7003941877452 0 376.7003967165947 PEAK CID FTMS 0 0 0 7105 162317.9375 0.9289502087564128 3 -0.2015876770019531 3 Unmodified _AAPPGPKD_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 9.347437153973935 0.5488964601725408 4 {I|L}SV{M(Oxidation (M))|F}S 5 -1 18.805 0.0 0.0 2.5027 0.0 0.0 133.03822626435914 82.06695734195546 215.1051836063146 0.0 0.0 0.0 0.0 0 0.6382104921644451 0.0 0.5 0.0 {I|L}SV{M(Oxidation (M))|F}S 2.5027 - 54 + 1 1.933 121408.8 1.0 2733 4373 7105 HBL1_DMSO_200M_050219_2,7108 HBL1_DMSO_200M_050219_2,7108,AAPPGPKD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7109 38.383 517.0 398250.0 25 0 34824.0 + 40448 VILEKATKV 9 211 334.2191790616376 999.6357077851128 3 334.2180358767509 MULTI CID FTMS 0 0 0 7105 154048.421875 0.7281644443065779 -2 0.0823020935058593 4 Unmodified _VILEKATKV_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7687207-7690948:-|nuORF 57.72198328787511 0.0273433238377839 4 V{I|L}{I|L}EKATKV 9 0 + 85.284 0.0 0.0 8.5315 8.5315 95.431 0.0 0.0 0.0 71.57272016916376 12.967043305270964 12.967043305270964 14.291653335242913 0 0.3001648626366046 2.0 0.91944517631652 0.6747425010840047 + + V{I|L}{I|L}EKATKV;V{I|L}{I|L}EKA{I|L}[KS];V{I|L}{I|L}V{[SA]|[TG]}ATKV;V{I|L}V{I|L}{[SA]|[TG]}ATKV;V{I|L}{I|L}V[QT]TKV;V{I|L}{I|L}ERR[KS];V{I|L}V{I|L}[QT]TKV;V{I|L}{I|L}V{[SA]|[TG]}A{I|L}[KS];V{I|L}{I|L}{M(Oxidation (M))|F}K[KG]PV;V{I|L}V[WR]TKV 8.5315;7.1018;6.8941;6.5617;5.9905;5.7087;5.6581;5.4644;5.322;5.1875 +;-;-;-;-;-;-;-;-;- + 465 + 1 1.933 167657.9 1.0 2734 4373 7105 HBL1_DMSO_200M_050219_2,7109 HBL1_DMSO_200M_050219_2,7109,VILEKATKV True True VILEKATKV 38.382534 334.218035876751 2601173.5 7105.0 ENST00000595288.5_1_19:7687207-7690948:-|nuORF;;ENSG00000076924|ENST00000358368|XAB2 5.196985244750977 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7111 38.387 49.0 936290.0 25 0 58818.0 + 3279 AYHGHGVSAF 10 91 523.2464139240866 1044.478274914973 2 523.2475463747978 MULTI CID FTMS 0 0 0 7110 898810.25 0.1096203706182461 8 -0.3347320556640625 1 Unmodified _AYHGHGVSAF_ ENST00000429772.6_1_12:48357436-48358078:+|nuORF;ENST00000550146.5_1_12:48357374-48358078:+|nuORF 36.04419817259434 0.1993394420055842 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}]RDA{M(Oxidation (M))|F} 8 6 + 33.368 0.0 0.0 3.1947 3.1947 66.674 0.0 0.0 0.0 2.7841464142532217 2.7841464142532217 2.7841464142532217 2.7841464142532217 0 0.6989700043360187 1.5228787452803376 0.5 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}]RDA{M(Oxidation (M))|F};[HV]SV[PA]MSA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}PD[PA]VSA{M(Oxidation (M))|F};[HV]SVWWTM;[HV]DR{[WT]|[RM]}TM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}][VG]DA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{M(Oxidation (M))|F}][PS]SA{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}WWVSA{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{[WT]|[RM]}RDA{M(Oxidation (M))|F};[HV]S[PS]WW{M(Oxidation (M))|F} 3.1947;2.9281;2.9128;2.7663;2.6997;2.3079;2.2822;2.1405;2.0738;2.0439 -;-;-;-;-;-;-;-;-;- 319 1 1.933 41161.2 1.0 2735 4374 7110 HBL1_DMSO_200M_050219_2,7111 HBL1_DMSO_200M_050219_2,7111,AYHGHGVSAF False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7112 38.388 41.0 1539200.0 25 0 136430.0 + 32290 RWPKKSAEF 9 106 383.5453438582354 1147.6142021749065 3 383.5450927615166 MULTI CID FTMS 0 0 0 7110 955360.8125 0.4720328284777811 12 -0.4549789428710937 2 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 13.042465956692816 0.4836390050082244 4 PPC(Carbamidomethyl (C))G{M(Oxidation (M))|F} 5 7 27.263 0.0 0.0 2.3756 0.0 0.0 571.3803578107437 0.0 571.3803578107437 0.0 11.778259348524358 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.0 PPC(Carbamidomethyl (C))G{M(Oxidation (M))|F} 2.3756 - 172 1 1.933 54765.3 1.0 2736 4374 7110 HBL1_DMSO_200M_050219_2,7112 HBL1_DMSO_200M_050219_2,7112,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7113 38.39 74.0 829020.0 25 0 106410.0 + 5793 DPPPGSHVI 9 81 459.7377035282235 917.460854123247 2 459.7372924685478 MULTI CID FTMS 0 0 0 7110 725993.875 0.0739365145788557 66 -2.8416976928710938 3 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 34.10243960390752 0.1078313939113124 4 [DP]PAPP 6 6 56.309 0.0 0.0 6.1375 0.0 0.0 0.0 340.1499159731096 340.1499159731096 45.04965456012764 0.0 0.0 0.0 0 1.2887254899964358 2.0 0.7302046884880937 0.0 [DP]PAPP 6.1375 - 140 1 1.933 52003.4 1.0 2737 4374 7110 HBL1_DMSO_200M_050219_2,7113 HBL1_DMSO_200M_050219_2,7113,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7114 38.392 94.0 838030.0 25 0 80041.0 + 3982 DALRKIRAV 9 95 347.88952386288645 1040.6467421888594 3 347.8889648318291 MULTI CID FTMS 0 0 0 7110 610571.8125 0.4281638079166101 5 -0.2721023559570312 4 Unmodified _DALRKIRAV_ ENSG00000155827|ENST00000389120|RNF20 22.65808497894818 0.2428932432760099 4 DA{I|L}RK{I|L} 6 3 62.81 0.0 0.0 6.0357 0.0 0.0 0.0 341.19431482486567 341.19431482486567 39.62266579556342 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.3807196863200844 + DA{I|L}RK{I|L} 6.0357 + + 115 + 1 1.933 68354.9 1.0 2738 4374 7110 HBL1_DMSO_200M_050219_2,7114 HBL1_DMSO_200M_050219_2,7114,DALRKIRAV False True DALRKIRAV 38.391998 347.888964831829 9162833.0 7110.0 ENSG00000155827|ENST00000389120|RNF20 3.49310048421224 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7115 38.4 440.0 302430.0 25 0 65756.0 + 32411 RYYDDPREY 9 89 638.7840652414915 1275.5535775497829 2 638.7837402224541 MULTI CID FTMS 0 0 0 7110 252828.109375 0.7726185146547803 4 -0.2287864685058593 5 Unmodified _RYYDDPREY_ ENSG00000065526|ENST00000375759|SPEN 47.594388314883695 0.0456443387682827 4 [RP][DN]DD 6 6 25.705 0.0 0.0 2.0152 0.0 0.0 0.0 560.2482202896878 560.2482202896878 16.435078169319294 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 1.1307196863200843 [RP][DN]DD 2.0152 - 176 1 1.933 100461.3 1.0 2739 4374 7110 HBL1_DMSO_200M_050219_2,7115 HBL1_DMSO_200M_050219_2,7115,RYYDDPREY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7116 38.41 564.0 387060.0 25 0 22213.0 4368 DAVAPGREY 9 165 489.237052732431 976.459552531662 2 489.2345153689384 MULTI CID FTMS 0 0 0 7110 149426.46875 0.2263342327730224 -13 0.769439697265625 6 Unmodified _DAVAPGREY_ ENSG00000198734|ENST00000367797|F5 9.38312468134398 0.5871240394367778 4 {[DA]|[EG]}VACT 6 5 29.666 0.0 0.0 3.0381 0.0 0.0 0.0 413.20800158855576 413.20800158855576 1.7989247940391095 0.0 0.0 0.0 0 0.7429928190999391 1.3010299956639813 0.805462187404089 0.0 {[DA]|[EG]}VACT 3.0381 - 516 1 1.933 166569.0 1.0 2740 4374 7110 HBL1_DMSO_200M_050219_2,7116 HBL1_DMSO_200M_050219_2,7116,DAVAPGREY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7117 38.424 800.0 199580.0 25 0 13857.0 + 39800 VESAAQCFC 9 181 479.1934894176456 956.3724259020912 2 479.1935912966728 MULTI CID FTMS 0 0 0 7110 147512.53125 0.6250985406645689 -2 0.0873565673828125 7 Unmodified _VESAAQCFC_ REV__ENSG00000030066|ENST00000378460|NUP160;REV__nc|ENSG00000030066|Q12769|NUP160 25.399314129420983 0.2080152500878129 4 VE 2 -1 29.252 0.0 0.0 3.0586 0.0 0.0 0.0 725.2389010065061 725.2389010065061 8.962053328752827 0.0 0.0 0.0 0 0.5 0.6777807052660807 0.0 0.0 VE 3.0586 + + 359 + 1 1.933 121751.0 0.6100000143051147 2741 4374 7110 HBL1_DMSO_200M_050219_2,7117 HBL1_DMSO_200M_050219_2,7117,VESAAQCFC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7118 38.437 800.0 438050.0 25 0 48669.0 + 16170 IVDKSGVVRV 10 234 357.8890220307136 1070.6452366923409 3 358.2227661013603 MULTI CID FTMS 0 0 0 7110 124576.546875 0.3359687953387689 -6 0.2144927978515625 8 Unmodified _IVDKSGVVRV_ ENSG00000102081|ENST00000370475|FMR1;ENSG00000114416|ENST00000357559|FXR1;ENSG00000129245|ENST00000250113|FXR2;ENST00000571079.1_1_17:7497531-7497639:-|nuORF;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-9|FMR1;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1 61.60191391372663 0.0323840705564037 4 {I|L}VDKSG 6 4 87.59 0.0 0.0 8.181 0.0 0.0 0.0 468.2946416346829 468.2946416346829 73.49902035602351 0.0 0.0 0.0 0 0.5902280322290656 2.0 1.2302046884880935 0.7614393726401688 + {I|L}VDKSG 8.181 + + 1384 + 1 1.933 281547.5 0.4799999892711639 2742 4374 7110 HBL1_DMSO_200M_050219_2,7118 HBL1_DMSO_200M_050219_2,7118,IVDKSGVVRV True True IVDKSGVVRV 38.437344 358.22276610136 10270238.0 7110.0 nc|ENSG00000102081|Q06787-4|FMR1;;nc|ENSG00000102081|Q06787-10|FMR1;;ENSG00000114416|ENST00000357559|FXR1;;nc|ENSG00000102081|Q06787-9|FMR1;;nc|ENSG00000102081|Q06787-5|FMR1;;nc|ENSG00000114416|P51114-2|FXR1;;nc|ENSG00000102081|Q06787-3|FMR1;;ENST00000571079.1_1_17:7497531-7497639:-|nuORF;;ENSG00000129245|ENST00000250113|FXR2;;ENSG00000102081|ENST00000370475|FMR1;;nc|ENSG00000114416|P51114-3|FXR1;;nc|ENSG00000102081|Q06787-8|FMR1;;nc|ENSG00000102081|Q06787-7|FMR1;;nc|ENSG00000102081|Q06787-2|FMR1;;nc|ENSG00000102081|Q06787-6|FMR1;;nc|ENSG00000102081|Q06787-11|FMR1 4.798094193140666 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7119 38.447 559.0 198580.0 25 0 25786.0 -1 0 129 486.25354405219537 485.2462675855954 1 486.2533141970634 MULTI CID FTMS 0 0 0 7110 118326.5 0.5373021442644497 -8 0.3062248229980469 9 4 V 1 -1 9.8329 0.0 0.0 2.0264 0.0 0.0 368.1665842133282 0.0 368.1665842133282 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.0264 - 25 + 1 1.933 89449.3 1.0 2743 4374 7110 HBL1_DMSO_200M_050219_2,7119 HBL1_DMSO_200M_050219_2,7119, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7120 38.461 800.0 147020.0 25 0 9548.5 + 23924 LVPKVESIQS 10 142 550.3225356483899 1098.6305183635798 2 550.3221923708916 MULTI CID FTMS 0 0 0 7110 103970.53125 0.0247597283302283 11 -0.4229469299316406 10 Unmodified _LVPKVESIQS_ REV__ENSG00000099290|ENST00000282633|WASHC2A;REV__ENSG00000172661|ENST00000623400|WASHC2C;REV__nc|ENSG00000099290|Q641Q2-2|WASHC2A;REV__nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;REV__nc|ENSG00000172661|Q9Y4E1-6|WASHC2C 32.78568957990786 0.2337485590374503 4 {I|L}PV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VS]{I|L}{[QS]|[NT]} 10 -1 + 50.267 0.0 0.0 4.5754 4.5754 83.877 0.0 0.0 0.0 28.429862658764257 3.7135567771539257 3.7135567771539257 24.365307411965563 0 0.2396518287104437 1.2218487496163564 1.4916440611282624 0.7302046884880937 {I|L}PV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VS]{I|L}{[QS]|[NT]};[Q{I|L}][HA][KG]HPV{I|L};[AG]{I|L}[HA][KG]HPV{I|L};[Q{I|L}][KG][HA]HPV{I|L};{I|L}[{I|L}T]H[KG]Q[R{M(Oxidation (M))|F}];[HA]{I|L}Q[KG]HPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KS][KG]HPV{I|L};[AG]{I|L}[KG][HA]HPV{I|L};[HA]{I|L}[AG][KG]HPV{I|L};[AG]G[K{I|L}][HA]HPV{I|L} 4.5754;2.3576;2.0278;1.4097;1.3562;1.235;1.1002;1.0799;0.40081;0.097615 -;-;-;-;-;-;-;-;-;- 319 + 1 1.933 91520.5 0.5699999928474426 2744 4374 7110 HBL1_DMSO_200M_050219_2,7120 HBL1_DMSO_200M_050219_2,7120,LVPKVESIQS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7121 38.476 800.0 195200.0 25 0 6925.6 + 30407 RAVYKDLV 8 167 482.2851019360983 962.5556509389966 2 482.2844726443291 MULTI CID FTMS 0 0 0 7110 103566.4296875 1.0 0 0.0 11 Unmodified _RAVYKDLV_ ENSG00000132635|ENST00000360652|PCED1A;ENSG00000179715|ENST00000546455|PCED1B;nc|ENSG00000132635|Q9H1Q7-2|PCED1A;nc|ENSG00000132635|Q9H1Q7-3|PCED1A;nc|ENSG00000132635|Q9H1Q7-4|PCED1A 28.486842064014134 0.4448922141344407 4 [VG]PPRPEV{I|L} 9 8 + 43.628 0.0 0.0 4.5325 4.5325 68.446 0.0 0.0 0.0 1.3654931240621977 1.3377830042433771 1.3377830042433771 1.3377830042433771 0 0.4564608101803795 1.6989700043360187 0.3807196863200844 0.2614393726401688 [VG]PPRPEV{I|L};[VG]PPRPE{I|L}V;[PS]{I|L}RPPPS{I|L};[VG]P[HV]KDV{I|L};[PS]{I|L}RPPPTV;[RP]P{[TV]|[{I|L}S]}PPS{I|L};[VG]P[HV]KD{I|L}V;[RP]P{[TV]|[{I|L}S]}PPTV;[{I|L}P]SRPPPS{I|L};[RP]{[TV]|[{I|L}S]}PPPS{I|L} 4.5325;4.3935;4.3906;4.3131;4.2516;4.2507;4.1741;4.1117;4.0186;3.9379 -;-;-;-;-;-;-;-;-;- 2444 1 1.933 120345.8 0.5 2745 4374 7110 HBL1_DMSO_200M_050219_2,7121 HBL1_DMSO_200M_050219_2,7121,RAVYKDLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7123 38.481 15.0 2416500.0 25 0 165210.0 + 42737 VVDPNDPQM 9 63 507.731820046605 1013.44908716001 2 507.7321655154228 MULTI CID FTMS 0 0 0 7122 3612148.75 0.2744232107804071 4 -0.1784744262695312 1 Unmodified _VVDPNDPQM_ ENSG00000151883|ENST00000281631|PARP8 25.399314129420983 0.2080152500878129 4 VVD 3 6 22.051 0.0 0.0 2.1759 0.0 0.0 0.0 697.2623860704193 697.2623860704193 0.9370405245622492 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + VVD 2.1759 + + 79 1 1.926 38050.7 1.0 2746 4375 7122 HBL1_DMSO_200M_050219_2,7123 HBL1_DMSO_200M_050219_2,7123,VVDPNDPQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7124 38.482 40.0 1166700.0 25 0 97971.0 + 32317 RYIGKTMDY 9 82 573.7839885115143 1145.5534240898285 2 573.7844116091728 MULTI CID FTMS 0 0 0 7122 1256142.375 0.5319619537857497 2 -0.0929031372070312 2 Unmodified _RYIGKTMDY_ ENSG00000143314|ENST00000361531|MRPL24;ENST00000478899.1_1_1:156707192-156707995:-|nuORF 45.69961567697781 0.0497987121815769 4 SGKTMDY 7 3 56.688 0.0 0.0 4.9486 0.0 0.0 345.2093983380875 0.0 345.2093983380875 0.0 35.261620030292136 0.0 0.0 0 1.1237125054200234 0.0 0.4247425010840047 0.3252574989159953 SGKTMDY 4.9486 - 106 1 1.926 40992.0 1.0 2747 4375 7122 HBL1_DMSO_200M_050219_2,7124 HBL1_DMSO_200M_050219_2,7124,RYIGKTMDY True True RYIGKTMDY 38.481868 573.784411609173 37293384.0 7122.0 ENSG00000143314|ENST00000361531|MRPL24;;ENST00000478899.1_1_1:156707192-156707995:-|nuORF 6.890945911407471 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7125 38.483 31.0 1292200.0 25 0 207230.0 + 37980 TNEYVCTNY 9 68 553.7245630101261 1105.434573087052 2 553.7251464724541 MULTI CID FTMS 0 0 0 7122 1940554.75 0.8637257867060306 -12 0.654571533203125 3 Unmodified _TNEYVCTNY_ REV__ENSG00000165323|ENST00000525166|FAT3;REV__nc|ENSG00000165323|Q8TDW7|FAT3 19.256988751693697 0.3154191944385105 4 YYGSQ 5 -1 55.005 0.0 0.0 4.9759 0.0 0.0 0.0 504.1773458744146 504.1773458744146 39.5205343810445 0.0 0.0 0.0 0 0.5 2.0 0.7302046884880937 0.5 YYGSQ 4.9759 - 226 1 1.926 38477.9 1.0 2748 4375 7122 HBL1_DMSO_200M_050219_2,7125 HBL1_DMSO_200M_050219_2,7125,TNEYVCTNY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7126 38.484 55.0 988880.0 25 0 87434.0 + 3863 DAKLEPTNV 9 93 493.7614349654868 985.5083169977736 2 493.7616454958916 MULTI CID FTMS 0 0 0 7122 1058257.125 0.054256034927475 -8 0.3815727233886719 4 Unmodified _DAKLEPTNV_ ENSG00000094804|ENST00000209728|CDC6 60.07390631473393 0.0260411565414776 4 {[DA]|[EG]}K{I|L}E[TP]NV 9 0 + 45.084 0.0 0.0 4.5747 4.5747 76.627 0.0 0.0 0.0 14.259687322722808 26.497651436415023 14.259687322722808 6.575221787320508 0 1.1435078169319297 1.3979400086720375 1.1307196863200843 0.0 + + {[DA]|[EG]}K{I|L}E[TP]NV;{[DA]|[EG]}KE{I|L}[TP]NV;{[DA]|[EG]}K{I|L}T[EP]NV;{[SA]|[TG]}VG{I|L}E[TP]NV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{I|L}E[TP]NV;{[SA]|[TG]}GV{I|L}E[TP]NV;[KG]E{I|L}E[TP]NV;{[DA]|[EG]}K{I|L}T[QP][DV];{[QS]|[NT]}V{I|L}E[TP]NV;{[DA]|[EG]}K{I|L}T[HA][KC] 4.5747;3.9075;3.6596;2.9027;2.8508;2.8223;2.8088;2.8035;2.7704;2.6779 +;-;-;-;-;-;-;-;-;- + 816 1 1.926 47517.0 1.0 2749 4375 7122 HBL1_DMSO_200M_050219_2,7126 HBL1_DMSO_200M_050219_2,7126,DAKLEPTNV True True DAKLEPTNV 38.484443 493.761645495892 435580176.0 7122.0 ENSG00000094804|ENST00000209728|CDC6 7.5183030764261884 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7127 38.488 200.0 457630.0 25 0 44956.0 + 35326 SSVENIQRV 9 109 516.2778100310702 1030.5410671289403 2 516.2782470583916 MULTI CID FTMS 0 0 0 7122 403778.21875 0.4057388503094076 3 -0.1351585388183593 5 Unmodified _SSVENIQRV_ ENSG00000173801|ENST00000393931|JUP 71.92227651296345 0.0203558744033348 4 {[CA]|SS}VEN{I|L}QRV 9 0 + 55.062 0.0 0.0 5.343 5.343 75.741 0.0 0.0 0.0 7.147642715192504 3.435823463494444 3.435823463494444 3.435823463494444 0 0.9749073637206092 0.0 0.4247425010840047 1.079689690656103 + + {[CA]|SS}VEN{I|L}QRV;{[CA]|SS}VEN{I|L}[RV]Q;{[CA]|SS}VEN{I|L}[AG]RV;{[CA]|SS}VEGG{I|L}QRV;{[CA]|SS}VEGG{I|L}[RV]Q;{[CA]|SS}VEGG{I|L}[AG]RV;{[CA]|SS}VV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QRV;{[CA]|SS}VV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RV]Q;{[CA]|SS}VV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]RV;VVW{[QV]|[N{I|L}]|[RA]|[KV]}Q{[WS]|[C(Carbamidomethyl (C)){I|L}]} 5.343;5.0096;4.4495;4.4495;4.1161;3.5602;3.2283;2.8949;2.3348;1.8043 +;-;-;-;-;-;-;-;-;- + 480 + 1 1.926 75568.7 1.0 2750 4375 7122 HBL1_DMSO_200M_050219_2,7127 HBL1_DMSO_200M_050219_2,7127,SSVENIQRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7128 38.491 134.0 531140.0 25 0 84506.0 + 33230 SFMQMAIAF 9 88 349.16686648247673 1044.4787700476302 3 349.1661865115166 MULTI CID FTMS 0 0 0 7122 251672.140625 0.0359939801198845 8 -0.2793960571289062 6 Unmodified _SFMQMAIAF_ REV__ENSG00000165487|ENST00000382374|MICU2;REV__ENST00000479790.2_1_13:22070152-22077202:-|nuORF 12.531546534597751 0.4974689918368763 4 {M(Oxidation (M))|F} 1 -1 15.485 0.0 0.0 1.4825 0.0 0.0 879.3994681450896 0.0 879.3994681450896 0.0 -11.197887582883936 -11.197887582883936 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.4825 + + 38 + 1 1.926 63536.0 1.0 2751 4375 7122 HBL1_DMSO_200M_050219_2,7128 HBL1_DMSO_200M_050219_2,7128,SFMQMAIAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7129 38.499 422.0 196370.0 25 0 12479.0 + 21838 LPNPTKPNNV 10 113 547.303947912225 1092.59334289125 2 547.3040038943291 MULTI CID FTMS 0 0 0 7122 237040.953125 0.883671376708308 1 -0.0659713745117187 7 Unmodified _LPNVNLPNVN_ nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;ENSG00000171681|ENST00000261168|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF 34.40172386719151 0.2166836008404837 4 {I|L}PNPTKHRM 9 7 + 74.733 0.0 0.0 6.8399 6.8399 83.368 0.0 0.0 0.0 50.40636133063461 2.9527766677488927 2.9527766677488927 4.538584807207556 0 0.8807196863200843 1.6989700043360187 0.0 0.6139829889124311 {I|L}PNPTKHRM;{I|L}PNPTKHSTV;{I|L}PNPTK[NP]NV;{I|L}PGGPTKHRM;{I|L}PGGPTKHSTV;{I|L}PGGPTK[NP]NV;{I|L}PNPTK[NP]GGV;{I|L}PNPAAP{[MS]|[{M(Oxidation (M))|F}A]}PV 6.8399;6.4245;6.1505;5.9971;5.5857;5.3117;5.1413;3.5954 -;-;-;-;-;-;-;- 796 + 1 1.926 70113.2 1.0 2752 4375 7122 HBL1_DMSO_200M_050219_2,7129 HBL1_DMSO_200M_050219_2,7129,LPNVNLPNVN False False LPNPTKPNNV 38.498521 547.304003894329 33075006.0 7122.0 nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;;ENSG00000171681|ENST00000261168|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;;ENST00000537653.5_1_12:14576849-14628955:+|nuORF 8.476458231608072 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7130 38.505 373.0 260920.0 25 0 29662.0 + 5600 DNNRSLDLD 9 122 531.2468865951042 1060.4792202570084 2 531.2465698122978 MULTI CID FTMS 0 0 0 7122 206256.171875 0.5302540234431143 -3 0.1809844970703125 8 Unmodified _DNNRSLDLD_ CON__P04264;CON__P12035;CON__P50446;CON__Q5XQN5;CON__Q6IFZ6;CON__Q7Z794;CON__Q8BGZ7;CON__Q922U2;ENSG00000167768|ENST00000252244|KRT1;ENSG00000186442|ENST00000417996|KRT3;ENSG00000189182|ENST00000341809|KRT77 43.9818466556824 0.0535980856389242 4 {NN|[MP]|[D{I|L}]|[EV]}S[RN]ND{I|L}D 9 4 + 64.727 0.0 0.0 6.1036 6.1036 81.642 0.0 0.0 0.0 5.473504814225322 16.478174818886373 5.473504814225322 5.473504814225322 0 0.4247425010840047 2.0 0.3054621874040891 0.7302046884880937 {NN|[MP]|[D{I|L}]|[EV]}S[RN]ND{I|L}D;{[TV]|[{I|L}S]}D[RN]ND{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}V[DG]S{I|L}D{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}S[RN]GGD{I|L}D;{[TV]|[{I|L}S]}D[RN]GGD{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}G[PA]D{I|L}D;[DN][RN]S{I|L}D{I|L}D;[{I|L}V]D{M(Oxidation (M))|F}G[PA]D{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}D{[MG]|[TS]}[HK][{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}S[KS]{[YC]|[HE]}[{M(Oxidation (M))|F}V] 6.1036;5.5875;5.3981;5.2353;4.7192;4.5592;3.5296;2.7185;1.0242;0.57427 -;-;-;-;-;-;+;-;-;- + 282 1 1.926 79629.5 1.0 2753 4375 7122 HBL1_DMSO_200M_050219_2,7130 HBL1_DMSO_200M_050219_2,7130,DNNRSLDLD True True DNNRSLDLD 38.505229 531.246569812298 5777044.5 7122.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;Q8BGZ7;;ENSG00000186442|ENST00000417996|KRT3;;P12035;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;Q5XQN5;;P50446;;Q6IFZ6;;Q922U2 5.002813657124837 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 7131 38.511 325.0 207700.0 25 0 21945.0 + 40449 VILEKATKV 9 106 500.8230255644346 999.6314981956692 2 500.8243286013603 MULTI CID FTMS 0 0 0 7122 167228.296875 1.0 0 0.0 9 Unmodified _VILEKATKV_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7687207-7690948:-|nuORF 34.93206674587334 0.1032771302489716 4 V{I|L}{I|L}EKATKV 9 0 + 74.065 0.0 0.0 7.4092 7.4092 93.893 0.0 0.0 0.0 58.658749220161496 9.81949275144234 9.81949275144234 17.971062485323507 0 0.4247425010840047 2.0 0.4247425010840047 0.1861818737241735 + + V{I|L}{I|L}EKATKV;V{I|L}V[WR]TKV 7.4092;5.6114 +;- + 286 + 1 1.926 55862.8 1.0 2754 4375 7122 HBL1_DMSO_200M_050219_2,7131 HBL1_DMSO_200M_050219_2,7131,VILEKATKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7132 38.52 489.0 220120.0 25 0 12782.0 + 32410 RYYDDPREY 9 113 426.1912815609922 1275.5520152831766 3 426.1901733279228 MULTI CID FTMS 0 0 0 7122 106946.2265625 0.4472061176254744 6 -0.2283210754394531 10 Unmodified _RYYDDPREY_ ENSG00000065526|ENST00000375759|SPEN 39.94969957227396 0.0757326808254658 4 [YR]YDD 5 4 39.551 0.0 0.0 3.1007 0.0 0.0 0.0 560.2467463005622 560.2467463005622 18.380003999414853 0.0 0.0 0.0 0 0.5 1.154901959985743 0.3807196863200844 0.3252574989159953 + [YR]YDD 3.1007 + + 259 1 1.926 92536.0 1.0 2755 4375 7122 HBL1_DMSO_200M_050219_2,7132 HBL1_DMSO_200M_050219_2,7132,RYYDDPREY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7133 38.534 800.0 77306.0 25 0 16729.0 -1 0 47 1114.780171751155 3341.318685853665 3 1115.112231433392 MULTI CID FTMS 0 0 0 7122 108478.765625 0.2315223103939984 -10 0.4627227783203125 11 4 Y{M(Oxidation (M))|F} 2 -1 9.464 0.0 0.0 0.28324 0.0 0.0 1310.4683195222651 1717.7308953269708 3028.199214849236 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.28324 - 12 + 1 1.926 57137.4 0.4199999868869781 2756 4375 7122 HBL1_DMSO_200M_050219_2,7133 HBL1_DMSO_200M_050219_2,7133, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7134 38.542 490.0 126970.0 25 0 5840.5 + 44013 YIFRNDEAI 9 101 570.7858411019397 1139.5571292706793 2 570.7852661013603 MULTI CID FTMS 0 0 0 7122 101695.5078125 0.8223390887272292 -1 0.0936279296875 12 Unmodified _YIFRNDEAI_ REV__ENSG00000155026|ENST00000404406|RSPH10B;REV__ENSG00000169402|ENST00000404077|RSPH10B2 15.847184025352805 0.4077185912009129 4 A{I|L} 2 -1 24.706 0.0 0.0 2.1681 0.0 0.0 937.4264559447876 0.0 937.4264559447876 0.0 8.904243831634984 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.0 A{I|L} 2.1681 + + 46 1 1.926 53308.8 1.0 2757 4375 7122 HBL1_DMSO_200M_050219_2,7134 HBL1_DMSO_200M_050219_2,7134,YIFRNDEAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7136 38.547 3.0 24523000.0 25 0 3997700.0 + 16402 IYQSKVREL 9 78 379.2206432961651 1134.6401004886957 3 379.2205688357353 MULTI CID FTMS 0 0 0 7135 18471116.0 0.951510708871284 -1 0.0659713745117187 1 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 23.78978130925829 0.2284941198415988 4 {I|L}YQSKV 6 3 62.797 0.0 0.0 5.5345 0.0 0.0 0.0 413.2169283502563 413.2169283502563 51.9825221775622 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.8807196863200843 + {I|L}YQSKV 5.5345 + + 78 + 1 1.926 63979.9 1.0 2758 4376 7135 HBL1_DMSO_200M_050219_2,7136 HBL1_DMSO_200M_050219_2,7136,IYQSKVREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7137 38.548 7.9 6183400.0 25 0 530990.0 + 12051 GQDVGRYQV 9 71 511.2566672775585 1020.498781621917 2 511.2568237185478 MULTI CID FTMS 0 0 0 7135 8333666.5 1.0 0 0.0 2 Unmodified _GQDVGRYQV_ ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF 53.832793166522166 0.0319663582346103 4 {[QG]|[NA]}VS[H{I|L}]VD 8 6 43.743 0.0 0.0 4.2864 0.0 0.0 0.0 182.05532927465663 182.05532927465663 23.90997284041749 0.0 0.0 0.0 0 0.7429928190999391 0.8860566476931632 0.0 2.079689690656103 {[QG]|[NA]}VS[H{I|L}]VD 4.2864 - 129 1 1.926 44601.5 1.0 2759 4376 7135 HBL1_DMSO_200M_050219_2,7137 HBL1_DMSO_200M_050219_2,7137,GQDVGRYQV True True GQDVGRYQV 38.547839 511.256823718548 170017428.0 7135.0 ENST00000485612.5_1_X:153061851-153063885:+|nuORF;;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;;ENSG00000180879|ENST00000370086|SSR4 6.547801494598389 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7138 38.549 57.0 1020800.0 25 0 95539.0 + 44552 YPESVGREV 9 72 518.2586288816432 1034.5027048300865 2 518.2591430544853 MULTI CID FTMS 0 0 0 7135 902576.9375 0.0764418142750139 -12 0.589935302734375 3 Unmodified _YPESVGREV_ ENSG00000170471|ENST00000262879|RALGAPB;nc|ENSG00000170471|Q86X10-3|RALGAPB;nc|ENSG00000170471|Q86X10-4|RALGAPB 29.84058131909904 0.1515068451768857 4 YPESVG 6 3 63.109 0.0 0.0 6.1004 0.0 0.0 0.0 399.2016085260376 399.2016085260376 39.156687756324686 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.8494850021680094 0.0 + YPESVG 6.1004 + + 141 + 1 1.926 51868.5 1.0 2760 4376 7135 HBL1_DMSO_200M_050219_2,7138 HBL1_DMSO_200M_050219_2,7138,YPESVGREV False True YPESVGREV 38.549284 518.259143054485 291622176.0 7135.0 nc|ENSG00000170471|Q86X10-3|RALGAPB;;ENSG00000170471|ENST00000262879|RALGAPB;;nc|ENSG00000170471|Q86X10-4|RALGAPB 6.540609359741211 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7139 38.552 148.0 443440.0 25 0 46875.0 -1 MECHSWSF 8 103 521.6907557059945 1041.366958478789 2 521.6915161013603 MULTI CID FTMS 0 0 0 7135 550008.8125 0.6665591857201072 -11 0.5286941528320312 4 Oxidation (M) _M(Oxidation (M))ECHSWSF_ ENST00000606930.1_1_5:150891787-150892117:+|nuORF 14.581692164780916 0.6954967302934248 4 S{M(Oxidation (M))|F} 2 -1 29.776 0.0 0.0 2.8593 0.0 0.0 789.2554118270012 0.0 789.2554118270012 0.0 10.21144069483583 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 S{M(Oxidation (M))|F} 2.8593 + + 61 + 1 1.926 57126.3 1.0 2761 4376 7135 HBL1_DMSO_200M_050219_2,7139 HBL1_DMSO_200M_050219_2,7139,MECHSWSF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7140 38.555 158.0 421630.0 25 0 36448.0 + 42742 VVDPNDPQM 9 95 515.728805267427 1029.443057601654 2 515.7291747927666 MULTI CID FTMS 0 0 0 7135 422514.65625 0.6145842045701659 4 -0.1195144653320312 5 Oxidation (M) _VVDPNDPQM(Oxidation (M))_ ENSG00000151883|ENST00000281631|PARP8 41.8396318013385 0.0653578398400075 4 DPQ{M(Oxidation (M))|F} 4 5 29.953 0.0 0.0 2.9096 0.0 0.0 524.2587447127852 0.0 524.2587447127852 0.0 -0.2364176144649121 -0.2364176144649121 0.0 0 0.3807196863200844 0.0 0.0 0.805462187404089 + DPQ{M(Oxidation (M))|F} 2.9096 + + 297 + 1 1.926 55320.4 1.0 2762 4376 7135 HBL1_DMSO_200M_050219_2,7140 HBL1_DMSO_200M_050219_2,7140,VVDPNDPQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7141 38.569 800.0 104160.0 25 0 6133.1 + -1 AGNAYWCERM 10 104 629.260429453468 1256.5063059737358 2 629.2620727419853 MULTI CID FTMS 0 0 0 7135 114553.359375 1.0 0 0.0 6 Carbamidomethyl (C) _AGNAYWC(Carbamidomethyl (C))ERM_ REV__ENSG00000106799|ENST00000374994|TGFBR1;REV__ENSG00000123612|ENST00000243349|ACVR1C;REV__ENSG00000135503|ENST00000257963|ACVR1B;REV__nc|ENSG00000106799|P36897-2|TGFBR1;REV__nc|ENSG00000106799|P36897-3|TGFBR1;REV__nc|ENSG00000123612|Q8NER5-2|ACVR1C;REV__nc|ENSG00000123612|Q8NER5-3|ACVR1C;REV__nc|ENSG00000123612|Q8NER5-4|ACVR1C;REV__nc|ENSG00000135503|P36896-4|ACVR1B;REV__nc|ENSG00000135503|P36896-5|ACVR1B 10.823927491677226 0.6659270209832991 4 DEAQQNA{M(Oxidation (M))|F} 8 -1 59.405 0.0 0.0 4.7278 0.0 0.0 335.1232777326188 0.0 335.1232777326188 0.0 38.01828723425615 0.0 0.0 0 0.8494850021680094 0.0 0.3054621874040891 0.0 DEAQQNA{M(Oxidation (M))|F} 4.7278 - 893 1 1.926 64940.4 0.6200000047683716 2763 4376 7135 HBL1_DMSO_200M_050219_2,7141 HBL1_DMSO_200M_050219_2,7141,AGNAYWCERM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7143 38.574 3.7 18206000.0 25 0 1348100.0 + 16406 IYQSKVREL 9 63 568.3269742749021 1134.639395616604 2 568.3275024294853 MULTI CID FTMS 0 0 0 7142 16425062.0 0.9924363044095486 1 -0.0422554016113281 1 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 38.61474834105838 0.0830609365873449 4 {I|L}YQSKV 6 3 78.761 0.0 0.0 6.9415 0.0 0.0 0.0 413.2157076471313 413.2157076471313 71.77108148272637 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3807196863200844 0.4247425010840047 + {I|L}YQSKV 6.9415 + + 67 + 1 1.918 55364.1 1.0 2764 4377 7142 HBL1_DMSO_200M_050219_2,7143 HBL1_DMSO_200M_050219_2,7143,IYQSKVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7144 38.575 16.0 2852800.0 25 0 242810.0 + -1 GVVTDMFTAI 10 77 535.2672444976168 1068.5199360620336 2 535.2673217654228 MULTI CID FTMS 0 0 0 7142 3771724.75 0.1640446922189125 -9 0.4010238647460937 2 Oxidation (M) _GVVTDM(Oxidation (M))FTAI_ REV__ENSG00000164659|ENST00000450689|ELAPOR2 19.256988751693697 0.5244284437930726 4 QDTRGTA{I|L} 8 -1 65.436 0.0 0.0 6.124 0.0 0.0 208.08520705390785 0.0 208.08520705390785 0.0 58.1286617806053 0.0 0.0 0 2.788725489996436 0.0 0.5 0.0 QDTRGTA{I|L} 6.124 - 226 1 1.918 40392.9 1.0 2765 4377 7142 HBL1_DMSO_200M_050219_2,7144 HBL1_DMSO_200M_050219_2,7144,GVVTDMFTAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7145 38.576 50.0 1782200.0 25 0 243520.0 + 22094 LPPPVAVRK 9 71 326.2152667066333 975.6239707201 3 326.2148620486259 MULTI CID FTMS 0 0 0 7142 855542.625 0.6095506773744174 -16 0.9559707641601562 3 Unmodified _LPPPVAVRK_ ENSG00000184271|ENST00000333640|POU6F1;nc|ENSG00000184271|Q14863|POU6F1 15.847184025352805 0.4077185912009129 4 {I|L}PPP 4 5 50.222 0.0 0.0 5.1476 0.0 0.0 0.0 568.3580288974919 568.3580288974919 39.25250945692483 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 + {I|L}PPP 5.1476 + + 41 + 1 1.918 76013.9 1.0 2766 4377 7142 HBL1_DMSO_200M_050219_2,7145 HBL1_DMSO_200M_050219_2,7145,LPPPVAVRK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7146 38.578 64.0 557850.0 25 0 54448.0 + -1 KDSTAWMEQFYQ 12 49 775.3369604954394 1548.6593680576786 2 775.8388549685478 MULTI CID FTMS 0 0 0 7142 785544.125 0.2731649229691237 5 -0.1482009887695312 4 2 Carbamidomethyl (C),Oxidation (M) _QSC(Carbamidomethyl (C))FRIC(Carbamidomethyl (C))FEM(Oxidation (M))R_ nc|ENSG00000171804|Q6ZQQ6|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;ENSG00000171804|ENST00000447313|WDR87 2.498486711656943 0.8633599123570009 4 EAQQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[SG] 10 -1 63.136 0.0 0.0 4.0768 0.0 0.0 451.18199355293126 0.0 451.18199355293126 0.0 42.33919093648403 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 EAQQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[SG] 4.0768 - 679 1 1.918 34561.9 1.0 2767 4377 7142 HBL1_DMSO_200M_050219_2,7146 HBL1_DMSO_200M_050219_2,7146,QSCFRICFEMR False False KDSTAWMEQFYQ 38.57767 775.3379 33474402.0 7142.0 nc|ENSG00000171804|Q6ZQQ6|WDR87;;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;;ENSG00000171804|ENST00000447313|WDR87 2.3236159086227417 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7147 38.58 108.0 504360.0 25 0 55832.0 + 16452 KAIGSLKEV 9 83 472.792450578032 943.570348222864 2 472.7924377322197 MULTI CID FTMS 0 0 0 7142 422927.0625 0.7359950829485951 -5 0.2738876342773437 5 Unmodified _KAIGSLKEV_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 38.61474834105838 0.0830609365873449 4 GA{I|L}S{[VA]|[{I|L}G]}KEV 9 3 36.28 0.0 0.0 3.845 0.0 0.0 71.07431227851718 0.0 71.07431227851718 0.0 12.32796403999962 0.0 0.0 0 2.120855139974828 0.0 0.0 0.0 GA{I|L}S{[VA]|[{I|L}G]}KEV 3.845 - 390 1 1.918 47037.4 1.0 2768 4377 7142 HBL1_DMSO_200M_050219_2,7147 HBL1_DMSO_200M_050219_2,7147,KAIGSLKEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7148 38.584 215.0 351870.0 25 0 26863.0 + 24144 LYQKEVSHL 9 106 558.8060634382952 1115.5975739433902 2 558.8064453005791 MULTI CID FTMS 0 0 0 7142 292563.1875 0.5801740456075716 -5 0.2738876342773437 6 Unmodified _LYQKEVSHL_ ENSG00000062822|ENST00000440232|POLD1;ENST00000596221.1_1_19:50920282-50921201:+|nuORF;ENST00000597963.5_1_19:50919583-50921201:+|nuORF 71.70789743142352 0.0204387454931768 4 {I|L}YQKEVS{I|L}H 9 2 + 104.45 0.0 0.0 9.363 9.363 91.567 0.0 0.0 0.0 90.95815128087182 9.041068762088996 9.041068762088996 7.786596949921218 0 1.9802046884880933 2.0 1.1549471895720984 0.5 {I|L}YQKEVS{I|L}H;{I|L}YQKVES{I|L}H;{I|L}Y[AG]KEVS{I|L}H;{I|L}Y[AG]KVES{I|L}H;[Y{I|L}]QEKVSH{I|L};[Y{I|L}]QS{[VA]|[{I|L}G]}VSH{I|L};[Y{I|L}][AG]EKVSH{I|L};[Y{I|L}][AG]S{[VA]|[{I|L}G]}VSH{I|L};[YQ]{I|L}EKVSH{I|L};[Y{I|L}]Q{[WT]|[RM]}RH{I|L} 9.363;8.665;8.5376;7.8396;5.8227;5.2333;4.9973;4.4118;4.1929;4.0031 -;-;-;-;-;-;-;-;-;- 632 + 1 1.918 60922.6 1.0 2769 4377 7142 HBL1_DMSO_200M_050219_2,7148 HBL1_DMSO_200M_050219_2,7148,LYQKEVSHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7149 38.589 257.0 431910.0 25 0 68288.0 + 14066 IANATRPTI 9 131 478.7797903907224 955.5450278482448 2 478.7792236208916 MULTI CID FTMS 0 0 0 7142 291215.34375 0.4156200299174994 -4 0.2285194396972656 7 Unmodified _IANATRPTI_ ENSG00000115760|ENST00000421745|BIRC6 40.23920728925047 0.0741434193262949 4 {I|L}ANATR[TP]{I|L} 9 0 + 79.258 0.0 0.0 8.2946 8.2946 92.356 0.0 0.0 0.0 59.19656979033872 0.8232913608582919 0.8232913608582919 9.208187539523747 0 1.25 2.0 0.0 0.805462187404089 + + {I|L}ANATR[TP]{I|L};{I|L}AGGATR[TP]{I|L};{I|L}QQTR[TP]{I|L} 8.2946;7.3309;2.464 +;-;- + 595 + 1 1.918 89365.0 1.0 2770 4377 7142 HBL1_DMSO_200M_050219_2,7149 HBL1_DMSO_200M_050219_2,7149,IANATRPTI True True IANATRPTI 38.588784 478.779223620892 5495855.0 7142.0 ENSG00000115760|ENST00000421745|BIRC6 5.18043867746989 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7150 38.593 243.0 252080.0 25 0 17717.0 + + 8191 RVPETAPEV 9 94 499.2685869815552 996.5226210299104 2 499.2690002322197 MULTI CID FTMS 0 0 0 7142 170622.15625 0.4975880248798159 5 -0.1482009887695312 8 Unmodified _EPSLRAPDL_ ENSG00000144357|ENST00000272793|UBR3;nc|ENSG00000144357|Q6ZT12-4|UBR3 37.97399986684836 0.0865783450051559 4 PEV 3 -1 30.93 0.0 0.0 3.1038 0.0 0.0 653.34773937542 0.0 653.34773937542 0.0 3.482587709797329 0.0 0.0 0 1.0 0.0 0.7742275032520141 0.0 PEV 3.1038 - 105 + 1 1.918 51598.5 1.0 2771 4377 7142 HBL1_DMSO_200M_050219_2,7150 HBL1_DMSO_200M_050219_2,7150,EPSLRAPDL False False RVPETAPEV 38.593318 499.26900023222 18037442.0 7142.0 ENSG00000144357|ENST00000272793|UBR3;;nc|ENSG00000144357|Q6ZT12-4|UBR3 4.868642171223958 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7151 38.598 232.0 369660.0 25 0 20243.0 -1 AFVFMHKV 8 123 332.17681058098043 993.5086023431412 3 332.1775390505791 MULTI CID FTMS 0 0 0 7142 146128.25 1.0 0 0.0 9 Oxidation (M) _AFVFM(Oxidation (M))HKV_ ENST00000595288.5_1_19:7692592-7692715:-|nuORF 11.640296217721598 0.738950129755968 4 K{M(Oxidation (M))|F}AV 4 -1 16.37 0.0 0.0 1.6477 0.0 0.0 530.2296620099625 0.0 530.2296620099625 0.0 3.895840698002999 0.0 0.0 0 0.1677353201839438 0.0 0.0 0.0 K{M(Oxidation (M))|F}AV 1.6477 - 94 1 1.918 72560.5 1.0 2772 4377 7142 HBL1_DMSO_200M_050219_2,7151 HBL1_DMSO_200M_050219_2,7151,AFVFMHKV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7152 38.611 800.0 208550.0 25 0 22936.0 + 45886 YYRLSQDAL 9 143 564.786235316686 0 564.7864257693291 PEAK CID FTMS 0 0 0 7142 124020.5390625 1.0 0 0.0 10 Unmodified _YYRLSQDAL_ REV__ENSG00000133030|ENST00000651222|MPRIP;REV__nc|ENSG00000133030|Q6WCQ1-2|MPRIP;REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP;REV__nc|ENSG00000133030|Q6WCQ1|MPRIP 9.347437153973935 0.3197567915069932 4 PQD 3 -1 26.44 0.0 0.0 2.3449 0.0 0.0 170.0694222475119 614.3279250440502 784.397347291562 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.75 PQD 2.3449 - 111 + 1 1.918 129756.8 0.6499999761581421 2773 4377 7142 HBL1_DMSO_200M_050219_2,7152 HBL1_DMSO_200M_050219_2,7152,YYRLSQDAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7154 38.623 539.0 181120.0 25 0 14192.0 + -1 GVPGRTMGV 9 123 437.2354569771513 436.22818051055134 1 437.2345153689384 MULTI CID FTMS 0 0 0 7153 96382.65625 0.029306213594388 19 -0.7488937377929688 1 ENST00000530219.1_1_11:8014470-8016722:+|nuORF;ENSG00000175390|ENST00000651655|EIF3F 4 V 1 -1 11.594 0.0 0.0 2.6577 0.0 0.0 319.1486039498076 0.0 319.1486039498076 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.6577 - 30 + 1 1.918 83901.7 1.0 2774 4378 7153 HBL1_DMSO_200M_050219_2,7154 HBL1_DMSO_200M_050219_2,7154, False False GVPGRTMGV 38.62307 437.234515368938 2651173.75 7153.0 ENST00000530219.1_1_11:8014470-8016722:+|nuORF;;ENSG00000175390|ENST00000651655|EIF3F 0.6483415563901266 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7155 38.627 217.0 479280.0 25 0 99323.0 + -1 LCQNRNGMV 9 90 546.2579784903751 1090.50140404755 2 546.2579833865166 MULTI CID FTMS 0 0 0 7153 307016.65625 0.3413946019073277 -8 0.3931999206542969 2 Carbamidomethyl (C) _LC(Carbamidomethyl (C))QNRNGMV_ REV__nc|ENSG00000197008|P52744-3|ZNF138 3.944395688203298 0.7769873103969335 4 {I|L} 1 -1 10.837 0.0 0.0 0.9938 0.0 0.0 959.4068128383688 0.0 959.4068128383688 0.0 4.895330465821786 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.9938 + + 19 + 1 1.918 83772.2 1.0 2775 4378 7153 HBL1_DMSO_200M_050219_2,7155 HBL1_DMSO_200M_050219_2,7155,LCQNRNGMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7156 38.641 800.0 229580.0 25 0 22797.0 + 5073 DGYEQAARV 9 164 504.7409398526873 1007.4673267721746 2 504.7416564822197 MULTI CID FTMS 0 0 0 7153 91499.40625 0.0003137278883492 141 -6.369686126708984 3 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 51.629811660486645 0.0367964933207742 4 [DG]YEQAARV 9 0 + 58.992 0.0 0.0 5.8555 5.8555 85.123 0.0 0.0 0.0 28.476622594126543 14.142427204637473 14.142427204637473 9.208187539523747 0 0.8829131673969606 0.7695510786217261 0.3807196863200844 0.5629529932484498 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YEQA{[NV]|[RG]}{I|L};[DG]YV[DN]ARV;[DG]YEQ[R{I|L}]Q;[DG]YE[AG]A{[NV]|[RG]}{I|L};[DG]YE[AG][R{I|L}]Q;[DG]YV[DN]{[NV]|[RG]}{I|L};[DG]AA{[YD]|[{M(Oxidation (M))|F}M]}AARV;VAWAE[YG]NV 5.8555;4.9415;4.2926;3.8068;3.6793;3.3786;2.76;2.244;2.1559;1.5588 +;-;-;-;-;-;-;-;-;- + 1331 + 1 1.918 139418.9 0.5699999928474426 2776 4378 7153 HBL1_DMSO_200M_050219_2,7156 HBL1_DMSO_200M_050219_2,7156,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7157 38.655 800.0 150030.0 25 0 9681.3 + 5608 DPAKFKSI 8 154 453.25826468839887 0 453.2600585818291 PEAK CID FTMS 0 0 0 7153 97375.8203125 0.9684738165394726 1 -0.0433158874511718 4 Unmodified _DPAKFKSI_ ENSG00000174238|ENST00000313486|PITPNA 38.17557092003332 0.1570009502315449 4 PAK{M(Oxidation (M))|F}KS 6 2 15.794 0.0 0.0 1.7462 0.0 0.0 115.02623721016172 128.07203088931877 243.0982680994805 0.0 0.0 0.0 0.0 0 0.5774509799928715 0.0 0.2887254899964357 0.3494850021680094 + PAK{M(Oxidation (M))|F}KS 1.7462 + + 67 + 1 1.918 93652.6 0.5099999904632568 2777 4378 7153 HBL1_DMSO_200M_050219_2,7157 HBL1_DMSO_200M_050219_2,7157,DPAKFKSI False True DPAKFKSI 38.654813 453.260058581829 784593.0625 7153.0 ENSG00000174238|ENST00000313486|PITPNA 4.787866115570068 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7159 38.66 84.0 895000.0 25 0 70514.0 + 32291 RWPKKSAEF 9 97 383.5453438582354 1147.6142021749065 3 383.5449096560478 MULTI CID FTMS 0 0 0 7158 573172.5 0.2831979633670404 17 -0.5865516662597656 1 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 24.020572477871973 0.2255576514309169 4 [WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F} 9 0 + 35.625 0.0 0.0 3.1043 3.1043 71.85 0.0 0.0 0.0 5.352124803540626 20.01734675796755 5.352124803540626 6.47817481888638 0 0.4247425010840047 1.2218487496163564 0.3807196863200844 0.0 + + [WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F};[WR][KP]K{[WT]|[RM]}{M(Oxidation (M))|F};[KP]TGRR{[SA]|[TG]}E{M(Oxidation (M))|F};[KP][WR]K{[SA]|[TG]}E{M(Oxidation (M))|F};[KP][VS]RK{[WT]|[RM]}{M(Oxidation (M))|F};[KP][WR]K{[WT]|[RM]}{M(Oxidation (M))|F};[KP]RRC[WR]{M(Oxidation (M))|F} 3.1043;2.5398;2.3576;1.719;1.4478;1.1545;0.19519 +;-;-;-;-;-;- + 244 1 1.908 66521.5 1.0 2778 4379 7158 HBL1_DMSO_200M_050219_2,7159 HBL1_DMSO_200M_050219_2,7159,RWPKKSAEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7160 38.662 72.0 789880.0 25 0 80656.0 + 5794 DPPPGSHVI 9 92 459.7377035282235 917.460854123247 2 459.7358886599541 MULTI CID FTMS 0 0 0 7158 673595.9375 0.068600214916726 71 -2.932315826416016 2 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 26.88365393820708 0.1891292719743517 4 DPP 3 6 55.445 0.0 0.0 6.0433 0.0 0.0 0.0 605.3070818894769 605.3070818894769 42.68110275043508 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + DPP 6.0433 + + 227 + 1 1.908 51439.5 1.0 2779 4379 7158 HBL1_DMSO_200M_050219_2,7160 HBL1_DMSO_200M_050219_2,7160,DPPPGSHVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7162 38.669 261.0 295830.0 25 0 30130.0 + -1 VMINKATPY 9 123 525.7712047943236 1049.527856655447 2 526.7758056521416 MULTI CID FTMS 0 0 0 7161 301341.15625 0.836925527654712 5 -0.1438331604003906 1 2 Oxidation (M) _M(Oxidation (M))PINKATIM(Oxidation (M))_ ENSG00000170906|ENST00000485876|NDUFA3 18.1463463914782 0.3454829746528889 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N[KA]T{M(Oxidation (M))|F}{I|L} 9 -1 + 27.36 0.0 0.0 2.6069 2.6069 64.017 0.0 0.0 0.0 1.7770340806903595 8.239087409443187 1.7770340806903595 1.7770340806903595 0 0.0 0.0 0.7059771852360797 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N[KA]T{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}E]V{M(Oxidation (M))|F}{I|L}WP{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N{I|L}[KA]T{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}D]|MM}{I|L}{M(Oxidation (M))|F}{I|L}WP{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N[KA]TPY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}GG[KA]T{M(Oxidation (M))|F}{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KT]{M(Oxidation (M))|F}T{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N[KA][DV]{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[{M(Oxidation (M))|F}V]AP{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N{I|L}[KA]TPY 2.6069;2.4376;2.1518;2.0584;1.8219;1.7296;1.6038;1.5618;1.4372;1.3668 -;-;-;-;-;-;-;-;-;- 802 + 1 1.908 67632.2 1.0 2780 4380 7161 HBL1_DMSO_200M_050219_2,7162 HBL1_DMSO_200M_050219_2,7162,MPINKATIM False False VMINKATPY 38.668773 526.775805652142 4629919.0 7161.0 ENSG00000170906|ENST00000485876|NDUFA3 1.389115164677302 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7163 38.676 401.0 428670.0 25 0 22154.0 + 45809 YYMLSTSL 8 149 489.237052732431 976.459552531662 2 489.2350952029228 MULTI CID FTMS 0 0 0 7161 279044.6875 0.422665179623341 -7 0.3211021423339844 2 Unmodified _YYMLSTSL_ REV__HERVFH21-int_dup68|chrX:64848898-64850686:+|1.1618635505066113|0.1868304972504996|2.64|46.0|9|1|sense 10.183394434864962 0.7604730176254005 4 YY{[ES]|[DT]|[{I|L}C]}{I|L}[R{M(Oxidation (M))|F}] 7 -1 + 29.014 0.0 0.0 2.9713 2.9713 77.946 0.0 0.0 0.0 4.33218846098795 1.7520571610612734 1.7520571610612734 16.549471895720984 0 0.3494850021680094 2.0 0.3054621874040891 0.0 YY{[ES]|[DT]|[{I|L}C]}{I|L}[R{M(Oxidation (M))|F}];YY[W{M(Oxidation (M))|F}][VS]{I|L};{[DA]|[EG]}VAC[VP][R{M(Oxidation (M))|F}];{[RE]|[WV]}AS[WD]T{I|L};YY[W{M(Oxidation (M))|F}]{[TV]|[{I|L}S]}V;YY[YN][KQ]V;YY[YN][KG]G{I|L};{[DA]|[EG]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[VP][R{M(Oxidation (M))|F}];{[HG]|PP}[C(Carbamidomethyl (C))S]T{I|L}[R{M(Oxidation (M))|F}] 2.9713;1.2765;1.1094;0.64424;0.52642;0.34608;0.33907;0.25077;0.23177 -;-;-;-;-;-;-;-;- 400 1 1.908 131551.3 1.0 2781 4380 7161 HBL1_DMSO_200M_050219_2,7163 HBL1_DMSO_200M_050219_2,7163,YYMLSTSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7164 38.681 277.0 369000.0 25 0 38054.0 + 32629 SAYGTATRI 9 116 470.24853500160486 938.4825170700096 2 470.2491332888603 MULTI CID FTMS 0 0 0 7161 180515.796875 0.3387048078856901 -6 0.27911376953125 3 Unmodified _SAYGTATRI_ ENSG00000198730|ENST00000361367|CTR9 34.93206674587334 0.1032771302489716 4 {[SA]|[TG]}YGTA 6 3 54.843 0.0 0.0 5.8438 0.0 0.0 0.0 385.2209871881469 385.2209871881469 40.74539712336197 0.0 0.0 0.0 0 0.9916440611282626 1.6989700043360187 0.8807196863200843 0.0 + {[SA]|[TG]}YGTA 5.8438 + + 515 + 1 1.908 81535.0 1.0 2782 4380 7161 HBL1_DMSO_200M_050219_2,7164 HBL1_DMSO_200M_050219_2,7164,SAYGTATRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7165 38.695 800.0 224460.0 25 0 6231.1 + -1 TIDCHMIGGC 10 164 561.7232820376338 1121.4320111420675 2 561.7239868044853 MULTI CID FTMS 0 0 0 7161 183486.9375 0.5845485414913659 -5 0.18548583984375 4 Carbamidomethyl (C),Oxidation (M) _TIDC(Carbamidomethyl (C))HM(Oxidation (M))IGGC_ REV__ENST00000425839.1_1_6:30437447-30438005:+|nuORF 3.944395688203298 0.708391353636983 4 {I|L} 1 -1 10.181 0.0 0.0 0.90786 0.0 0.0 990.336855357691 0.0 990.336855357691 0.0 1.5756321960212103 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.90786 + + 199 + 1 1.908 137474.5 0.8100000023841858 2783 4380 7161 HBL1_DMSO_200M_050219_2,7165 HBL1_DMSO_200M_050219_2,7165,TIDCHMIGGC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7166 38.705 557.0 291940.0 25 0 37380.0 + 4879 DGFPENKKI 9 149 349.85357371841604 0 349.8536254763603 PEAK CID FTMS 0 0 0 7161 171857.953125 0.8043369028714384 -7 0.3211021423339844 5 Unmodified _DGFPENKKI_ ENSG00000164338|ENST00000296792|UTP15;nc|ENSG00000164338|Q8TED0-2|UTP15;nc|ENSG00000164338|Q8TED0-3|UTP15 27.628801355627647 0.1319135480000405 4 E 1 8 6.5938 0.0 0.0 0.94509 0.0 0.0 67.32109715595955 498.3049410455688 565.6260382015283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + E 0.94509 + + 24 + 1 1.908 135432.5 1.0 2784 4380 7161 HBL1_DMSO_200M_050219_2,7166 HBL1_DMSO_200M_050219_2,7166,DGFPENKKI False True DGFPENKKI 38.704638 349.85362547636 25091565.0 7161.0 nc|ENSG00000164338|Q8TED0-3|UTP15;;ENSG00000164338|ENST00000296792|UTP15;;nc|ENSG00000164338|Q8TED0-2|UTP15 4.71379288037618 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7168 38.71 154.0 664400.0 25 0 95015.0 + 16171 IVDKSGVVRV 10 96 357.8890220307136 1070.6452366923409 3 357.8886596560478 MULTI CID FTMS 0 0 0 7167 449492.03125 0.6123275765403883 4 -0.1009979248046875 1 Unmodified _IVDKSGVVRV_ ENSG00000102081|ENST00000370475|FMR1;ENSG00000114416|ENST00000357559|FXR1;ENSG00000129245|ENST00000250113|FXR2;ENST00000571079.1_1_17:7497531-7497639:-|nuORF;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-9|FMR1;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1 47.594388314883695 0.0942698883389255 4 {I|L}VDKSGVV[RV] 10 0 + 80.628 0.0 0.0 7.5308 7.5308 92.963 0.0 0.0 0.0 68.13608784304506 2.0074990971912854 2.0074990971912854 12.487737688117235 0 0.2302046884880938 2.0 0.8494850021680094 0.4247425010840047 + + {I|L}VDKSGVV[RV];{I|L}VDKV[SG]V[RV];{I|L}[WR]SRV[RV];{I|L}[KC][TP]RV[RV] 7.5308;6.3644;2.2501;0.70711 +;-;-;- + 187 + 1 1.908 91234.7 1.0 2785 4381 7167 HBL1_DMSO_200M_050219_2,7168 HBL1_DMSO_200M_050219_2,7168,IVDKSGVVRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7169 38.717 429.0 222720.0 25 0 21530.0 -1 0 132 486.25354405219537 485.2462675855954 1 486.2530395388603 MULTI CID FTMS 0 0 0 7167 163111.125 0.7406621273838632 -1 0.0428352355957031 2 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F} 3 -1 17.932 0.0 0.0 3.6954 0.0 0.0 0.0 101.05678939639536 101.05678939639536 6.672765149038224 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F} 3.6954 - 30 1 1.908 76139.8 1.0 2786 4381 7167 HBL1_DMSO_200M_050219_2,7169 HBL1_DMSO_200M_050219_2,7169, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7171 38.733 800.0 260940.0 25 0 16026.0 + 45847 YYQCMGNYC 9 138 572.6979479052275 1143.3813428772548 2 572.6976196169853 MULTI CID FTMS 0 0 0 7170 50119.8984375 0.2744058034864547 -4 0.1059455871582031 1 Unmodified _YYQCMGNYC_ REV__ENSG00000168615|ENST00000487273|ADAM9;REV__nc|ENSG00000168615|Q13443-2|ADAM9 12.531546534597751 0.4974689918368763 4 YYY 3 -1 47.945 0.0 0.0 4.1933 0.0 0.0 0.0 651.1737764947874 651.1737764947874 34.75772496747986 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 YYY 4.1933 - 367 + 1 1.908 157572.8 0.6899999976158142 2787 4382 7170 HBL1_DMSO_200M_050219_2,7171 HBL1_DMSO_200M_050219_2,7171,YYQCMGNYC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7172 38.742 482.0 220000.0 25 0 31657.0 + 4878 DGFPENKKI 9 136 524.2764670960572 1046.5383812589143 2 524.2777587771416 MULTI CID FTMS 0 0 0 7170 170947.703125 0.8022501112560632 -12 0.4991455078125 2 Unmodified _DGFPENKKI_ ENSG00000164338|ENST00000296792|UTP15;nc|ENSG00000164338|Q8TED0-2|UTP15;nc|ENSG00000164338|Q8TED0-3|UTP15 20.41453444215458 0.284085796332423 4 [DG]{M(Oxidation (M))|F}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KN 8 4 32.164 0.0 0.0 3.0733 0.0 0.0 0.0 125.07247339420157 125.07247339420157 -0.5285230732527495 0.0 -0.5285230732527495 0.0 0 0.6421590589602533 0.3979400086720376 0.805462187404089 0.75 [DG]{M(Oxidation (M))|F}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KN 3.0733 - 772 + 1 1.908 86429.1 1.0 2788 4382 7170 HBL1_DMSO_200M_050219_2,7172 HBL1_DMSO_200M_050219_2,7172,DGFPENKKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7173 38.756 800.0 84464.0 25 0 7711.7 + -1 PVPDETCHLRG 11 76 640.8073719365507 1279.6001909399013 2 640.8074218630791 MULTI CID FTMS 0 0 0 7170 143835.140625 0.7665469257471678 -5 0.1482009887695312 3 Carbamidomethyl (C) _PVPDETC(Carbamidomethyl (C))HLRG_ REV__ENSG00000149600|ENST00000278980|COMMD7;REV__nc|ENSG00000149600|Q86VX2-2|COMMD7 8.155526934196011 0.8366696279279818 4 {I|L} 1 -1 12.218 0.0 0.0 0.95487 0.0 0.0 1148.5051572258371 0.0 1148.5051572258371 0.0 5.541090196904113 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.95487 + + 21 + 1 1.908 58783.0 0.6899999976158142 2789 4382 7170 HBL1_DMSO_200M_050219_2,7173 HBL1_DMSO_200M_050219_2,7173,PVPDETCHLRG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7175 38.76 3.2 12696000.0 25 0 1138800.0 + 3864 DAKLEPTNV 9 76 493.7614349654868 985.5083169977736 2 493.7616149783134 MULTI CID FTMS 0 0 0 7174 19504874.0 1.0 0 0.0 1 Unmodified _DAKLEPTNV_ ENSG00000094804|ENST00000209728|CDC6 56.17704186161178 0.0281986971544335 4 {[DA]|[EG]}K{I|L}E 5 4 38.505 0.0 0.0 3.9071 0.0 0.0 0.0 426.1988484595735 426.1988484595735 20.73617692033952 0.0 0.0 0.0 0 0.5 1.3979400086720375 1.110924374808178 0.0 + {[DA]|[EG]}K{I|L}E 3.9071 + + 199 1 1.897 37505.6 1.0 2790 4383 7174 HBL1_DMSO_200M_050219_2,7175 HBL1_DMSO_200M_050219_2,7175,DAKLEPTNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7176 38.761 22.0 2029500.0 25 0 254500.0 + 45831 YYPDGNSQY 9 61 553.7245630101261 1105.434573087052 2 553.7251464724541 MULTI CID FTMS 0 0 0 7174 1925974.875 0.8572363980379446 -4 0.100921630859375 2 Unmodified _YYPDGNSQY_ nc|ENSG00000141380|Q15532-2|SS18 18.13498045792455 0.3457906370836843 4 YYGSQYYY 8 5 + 58.849 0.0 0.0 5.3236 5.3236 83.653 0.0 0.0 0.0 14.47112801755864 43.36487529584844 14.47112801755864 9.262137858390815 0 0.8182503180159344 2.0 0.7302046884880937 0.0 YYGSQYYY;YYGS[AG]YYY;YYGS[YE][HT]S;[DP]NGSQYYY;SQEYQS{[DS]|[MA]|[CV]|TT}Y;[DP]GGGSQYYY;[DP]GNSQYYY;[DP]NGS[AG]YYY;[DP]NGS[YE][HT]S;SQEYE[C(Carbamidomethyl (C))K]Y 5.3236;4.4858;4.1258;3.7445;3.6688;3.5144;3.0198;2.9115;2.8959;2.7228 -;-;-;-;-;-;-;-;-;- 362 1 1.897 36390.6 1.0 2791 4383 7174 HBL1_DMSO_200M_050219_2,7176 HBL1_DMSO_200M_050219_2,7176,YYPDGNSQY False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7177 38.764 108.0 354390.0 25 0 61477.0 -1 GEVCCWLCI 9 57 541.728286705154 1081.442020477108 2 541.7286254763603 MULTI CID FTMS 0 0 0 7174 332243.6875 0.2978659037807611 -6 0.186492919921875 3 Carbamidomethyl (C) _GEVC(Carbamidomethyl (C))CWLCI_ ENSG00000164082|ENST00000395052|GRM2;ENST00000296479.9_1_3:51747995-51752125:+|nuORF 8.593279151180031 0.6146971463335029 4 TTS 3 -1 17.435 0.0 0.0 1.6122 0.0 0.0 416.22902106480166 373.0655611627563 789.294582227558 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 TTS 1.6122 - 15 + 1 1.897 36137.7 1.0 2792 4383 7174 HBL1_DMSO_200M_050219_2,7177 HBL1_DMSO_200M_050219_2,7177,GEVCCWLCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7178 38.771 448.0 225130.0 25 0 13191.0 + 42738 VVDPNDPQM 9 123 507.731820046605 1013.44908716001 2 507.7317687869072 MULTI CID FTMS 0 0 0 7174 258131.75 0.0196108600564595 12 -0.4196662902832031 4 Unmodified _VVDPNDPQM_ ENSG00000151883|ENST00000281631|PARP8 49.93300154707207 0.0405168250806675 4 [DP]NDP 5 4 30.877 0.0 0.0 3.0468 0.0 0.0 0.0 472.22439168565376 472.22439168565376 2.945577698402332 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.4517188504113846 0.6694451763165201 + [DP]NDP 3.0468 + + 700 1 1.897 84106.7 1.0 2793 4383 7174 HBL1_DMSO_200M_050219_2,7178 HBL1_DMSO_200M_050219_2,7178,VVDPNDPQM True True VVDPNDPQM 38.7715 507.731768786907 374902848.0 7174.0 ENSG00000151883|ENST00000281631|PARP8 6.870431582132976 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7179 38.785 800.0 233000.0 25 0 27281.0 + 5601 DNNRSLDLD 9 157 531.2468865951042 1060.4792202570084 2 531.2470580935478 MULTI CID FTMS 0 0 0 7174 238760.671875 0.6138182714766337 5 -0.1900100708007812 5 Unmodified _DNNRSLDLD_ CON__P04264;CON__P12035;CON__P50446;CON__Q5XQN5;CON__Q6IFZ6;CON__Q7Z794;CON__Q8BGZ7;CON__Q922U2;ENSG00000167768|ENST00000252244|KRT1;ENSG00000186442|ENST00000417996|KRT3;ENSG00000189182|ENST00000341809|KRT77 55.23464941255904 0.0288927259679799 4 {NN|[MP]|[D{I|L}]|[EV]}S[RN]ND{I|L}D 9 4 + 64.446 0.0 0.0 6.0771 6.0771 76.63 0.0 0.0 0.0 2.318152605279032 12.98332479720628 2.318152605279032 2.318152605279032 0 0.8494850021680094 2.0 0.5994850021680094 0.7614393726401688 {NN|[MP]|[D{I|L}]|[EV]}S[RN]ND{I|L}D;[DN]NRS{I|L}D{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}S[PS]S{I|L}D{I|L}D;{[TV]|[{I|L}S]}D[RN]ND{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}S[RN]GGD{I|L}D;[DN]GGRS{I|L}D{I|L}D;{[TV]|[{I|L}S]}D[RN]GGD{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}SVV{[DA]|[EG]}D{I|L}D;[DN][RD][KA]D{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}S[KS]W[NP]D 6.0771;5.8585;5.7679;5.7326;5.2088;4.9902;4.8643;4.1911;3.815;2.3147 -;+;-;-;-;-;-;-;-;- + 789 1 1.897 144227.9 0.9399999976158142 2794 4383 7174 HBL1_DMSO_200M_050219_2,7179 HBL1_DMSO_200M_050219_2,7179,DNNRSLDLD True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 7181 38.8 736.0 254380.0 25 0 53413.0 -1 0 67 1114.780171751155 3341.318685853665 3 1115.114794909954 MULTI CID FTMS 0 0 0 7180 394621.15625 0.8422256770618657 -1 0.0296363830566406 1 4 E 1 -1 6.9897 0.0 0.0 0.20919 0.0 0.0 2685.0900688131446 524.1621187799436 3209.2521875930884 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20919 - 8 + 1 1.897 153874.7 1.0 2795 4384 7180 HBL1_DMSO_200M_050219_2,7181 HBL1_DMSO_200M_050219_2,7181, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7182 38.802 78.0 640890.0 25 0 48756.0 + 34712 SPWVPCPAP 9 92 477.2293481201721 952.4441433071444 2 477.2288085818291 MULTI CID FTMS 0 0 0 7180 641398.375 0.4437158215720354 -7 0.2161293029785156 2 Unmodified _SPWVPCPAP_ REV__ENST00000274811.8_1_5:175963981-175964065:-|nuORF 23.1484247019978 0.2366544122328345 4 SPAMPHNS{I|L} 9 -1 + 74.347 0.0 0.0 7.8059 7.8059 92.405 0.0 0.0 0.0 30.11037454634915 9.38477471662273 9.38477471662273 9.38477471662273 0 0.9526508185411954 2.0 0.7134679910804405 0.805462187404089 SPAMPHNS{I|L};SPAMP{[QS]|[NT]}VH;SPAM[KA][WY];SPAMPHGGS{I|L};SP[WE][QA]VH 7.8059;6.8206;6.0105;5.9934;3.9943 -;-;-;-;- 346 + 1 1.897 45401.2 1.0 2796 4384 7180 HBL1_DMSO_200M_050219_2,7182 HBL1_DMSO_200M_050219_2,7182,SPWVPCPAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7183 38.806 187.0 445200.0 25 0 37212.0 + 3610 DAASYVRKV 9 99 504.7772899886477 1007.5400270440956 2 504.7770568728447 MULTI CID FTMS 0 0 0 7180 274576.3125 0.1550817080284158 -5 0.1305580139160156 3 Unmodified _DAASYVRKV_ ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A 49.52724829834842 0.0414064571532091 4 {[DA]|[EG]}ASYVRKV 9 0 + 75.281 0.0 0.0 7.4717 7.4717 85.529 0.0 0.0 0.0 52.74089217652197 8.197859905088634 8.197859905088634 4.771212547196626 0 1.3494850021680094 2.0 0.4247425010840047 0.0 + + {[DA]|[EG]}ASYVRKV;{[DA]|[EG]}ASYVKRV 7.4717;6.9982 +;- + 299 + 1 1.897 68136.4 1.0 2797 4384 7180 HBL1_DMSO_200M_050219_2,7183 HBL1_DMSO_200M_050219_2,7183,DAASYVRKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7185 38.81 8.8 7028000.0 25 0 1302100.0 + 16403 IYQSKVREL 9 75 379.2206432961651 1134.6401004886957 3 379.2204772830009 MULTI CID FTMS 0 0 0 7184 5720021.0 0.2946579533401571 8 -0.2824630737304687 1 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 33.4449034751529 0.1114409586740657 4 {I|L}YQSKV 6 3 67.044 0.0 0.0 5.9089 0.0 0.0 0.0 413.2155855768188 413.2155855768188 56.58661594732408 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.805462187404089 0.5 + {I|L}YQSKV 5.9089 + + 80 + 1 1.897 54331.2 1.0 2798 4385 7184 HBL1_DMSO_200M_050219_2,7185 HBL1_DMSO_200M_050219_2,7185,IYQSKVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7186 38.811 9.2 6697200.0 25 0 762800.0 + 44553 YPESVGREV 9 56 518.2586288816432 1034.5027048300865 2 518.2592651247978 MULTI CID FTMS 0 0 0 7184 7316967.0 0.6196947974536586 -3 0.0882148742675781 2 Unmodified _YPESVGREV_ ENSG00000170471|ENST00000262879|RALGAPB;nc|ENSG00000170471|Q86X10-3|RALGAPB;nc|ENSG00000170471|Q86X10-4|RALGAPB 31.26834338654808 0.1333407332142048 4 YPESV 5 4 71.058 0.0 0.0 6.8688 0.0 0.0 0.0 456.22218277239153 456.22218277239153 46.8765315847925 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.8494850021680094 0.0 + YPESV 6.8688 + + 87 + 1 1.897 57024.2 1.0 2799 4385 7184 HBL1_DMSO_200M_050219_2,7186 HBL1_DMSO_200M_050219_2,7186,YPESVGREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7187 38.812 43.0 1041200.0 25 0 74817.0 + 12052 GQDVGRYQV 9 69 511.2566672775585 1020.498781621917 2 511.2568237185478 MULTI CID FTMS 0 0 0 7184 1201019.5 0.1441165782192028 9 -0.3207817077636719 3 Unmodified _GQDVGRYQV_ ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF 34.40172386719151 0.1061884637610825 4 {[QG]|[NA]}DVV 5 4 29.833 0.0 0.0 2.9234 0.0 0.0 0.0 519.2300509088499 519.2300509088499 18.41289794073925 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {[QG]|[NA]}DVV 2.9234 - 124 + 1 1.897 40470.2 1.0 2800 4385 7184 HBL1_DMSO_200M_050219_2,7187 HBL1_DMSO_200M_050219_2,7187,GQDVGRYQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7188 38.814 87.0 517250.0 25 0 66060.0 -1 MECHSWSF 8 83 521.6907557059945 1041.366958478789 2 521.6917602419853 MULTI CID FTMS 0 0 0 7184 651099.1875 0.7890712555501525 -2 0.0499229431152343 4 Oxidation (M) _M(Oxidation (M))ECHSWSF_ ENST00000606930.1_1_5:150891787-150892117:+|nuORF 26.34127834903884 0.4900704351052977 4 SPS{M(Oxidation (M))|F} 4 -1 45.165 0.0 0.0 4.3371 0.0 0.0 605.1739369123062 0.0 605.1739369123062 0.0 35.63213378353272 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.0 SPS{M(Oxidation (M))|F} 4.3371 - 38 1 1.897 42277.8 1.0 2801 4385 7184 HBL1_DMSO_200M_050219_2,7188 HBL1_DMSO_200M_050219_2,7188,MECHSWSF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7189 38.819 229.0 187380.0 25 0 14580.0 + 31564 RQLKKLDEDSL 11 75 448.9208051874494 1343.7405861625482 3 448.9205810427666 MULTI CID FTMS 0 0 0 7184 257392.578125 1.0 0 0.0 5 Unmodified _RQLKKLDEDSL_ ENSG00000101109|ENST00000372806|STK4;ENST00000480745.5_1_20:43595209-43601992:+|nuORF;ENST00000488618.1_1_20:43595209-43600800:+|nuORF;nc|ENSG00000101109|Q13043-2|STK4 29.291429492411588 0.4044309236191126 4 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KK{NN|[MP]|[D{I|L}]|[EV]}EDS{I|L} 11 0 + 67.466 0.0 0.0 5.0208 5.0208 87.053 0.0 0.0 0.0 7.367585652254178 59.56154852465221 7.367585652254178 67.4663983792259 0 1.0 0.0 0.8494850021680094 0.0 + + {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KK{NN|[MP]|[D{I|L}]|[EV]}EDS{I|L} 5.0208 + + 88 1 1.897 44228.5 1.0 2802 4385 7184 HBL1_DMSO_200M_050219_2,7189 HBL1_DMSO_200M_050219_2,7189,RQLKKLDEDSL False True RQLKKLDEDSL 38.81865 448.920581042767 1799211.125 7184.0 nc|ENSG00000101109|Q13043-2|STK4;;ENST00000480745.5_1_20:43595209-43601992:+|nuORF;;ENST00000488618.1_1_20:43595209-43600800:+|nuORF;;ENSG00000101109|ENST00000372806|STK4 6.8982588450113935 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7190 38.832 800.0 154280.0 25 0 49442.0 + 33391 SGQGGGRAG 9 59 746.353876655844 745.346600189244 1 746.3553344607353 MULTI CID FTMS 0 0 0 7184 166087.015625 0.275911187569902 -7 0.1941604614257812 6 Unmodified _SGQGGGRAG_ REV__ENSG00000146834|ENST00000310512|MEPCE 0.0 0.9146841635160942 4 P{M(Oxidation (M))|F}[KP] 4 -1 16.655 0.0 0.0 2.2346 0.0 0.0 258.06782729316564 0.0 258.06782729316564 0.0 9.208187539523747 0.0 0.0 0 1.0 0.0 0.0 0.0 P{M(Oxidation (M))|F}[KP] 2.2346 - 18 1 1.897 90844.9 0.7099999785423279 2803 4385 7184 HBL1_DMSO_200M_050219_2,7190 HBL1_DMSO_200M_050219_2,7190,SGQGGGRAG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7191 38.838 282.0 392040.0 25 0 93000.0 + 1101 AGPAPKDPL 9 117 433.24200354850063 864.4694541638013 2 433.2437316775322 MULTI CID FTMS 0 0 0 7184 127524.328125 0.5669467261356274 -12 0.464935302734375 7 Unmodified _AGPAPKDPL_ REV__ENSG00000075218|ENST00000454366|GTSE1 12.531546534597751 0.4974689918368763 4 [R{I|L}]Y 3 -1 13.072 0.0 0.0 1.5121 0.0 0.0 0.0 429.1750582330688 429.1750582330688 0.6027588722727373 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.0 [R{I|L}]Y 1.5121 - 90 + 1 1.897 92271.5 1.0 2804 4385 7184 HBL1_DMSO_200M_050219_2,7191 HBL1_DMSO_200M_050219_2,7191,AGPAPKDPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7193 38.842 2.7 14133000.0 25 0 1139400.0 34487 SMLSFSDVAI 10 72 535.2672444976168 1068.5199360620336 2 535.2677490115166 MULTI CID FTMS 0 0 0 7192 22992056.0 1.0 0 0.0 1 Unmodified _SMLSFSDVAI_ ENSG00000187918|ENST00000641930|OR51I2 15.847184025352805 0.5816416552707754 4 QDT[WK]A{I|L} 7 8 57.083 0.0 0.0 5.3422 0.0 0.0 208.08153381769608 0.0 208.08153381769608 0.0 48.13055110109673 0.0 0.0 0 2.6237125054200234 0.0 0.0 0.0 QDT[WK]A{I|L} 5.3422 - 104 + 1 1.888 35714.7 1.0 2805 4386 7192 HBL1_DMSO_200M_050219_2,7193 HBL1_DMSO_200M_050219_2,7193,SMLSFSDVAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7194 38.843 18.0 3356800.0 25 0 214110.0 + 16391 IYQSKKQIQ 9 62 568.3269742749021 1134.639395616604 2 568.3273193240166 MULTI CID FTMS 0 0 0 7192 3368902.5 0.2035560746751573 10 -0.4036750793457031 2 Unmodified _IYQSKKQIQ_ REV__ENSG00000173166|ENST00000319170|RAPH1;REV__nc|ENSG00000173166|Q70E73-2|RAPH1;REV__nc|ENSG00000173166|Q70E73-3|RAPH1;REV__nc|ENSG00000173166|Q70E73-4|RAPH1;REV__nc|ENSG00000173166|Q70E73-5|RAPH1;REV__nc|ENSG00000173166|Q70E73-6|RAPH1;REV__nc|ENSG00000173166|Q70E73-7|RAPH1;REV__nc|ENSG00000173166|Q70E73-8|RAPH1;REV__nc|ENSG00000173166|Q70E73-9|RAPH1 41.8396318013385 0.0653578398400075 4 {I|L}YQSKV 6 -1 81.815 0.0 0.0 7.2107 0.0 0.0 0.0 413.2154940240844 413.2154940240844 74.82570335676726 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.805462187404089 0.4247425010840047 {I|L}YQSKV 7.2107 - 65 + 1 1.888 48802.3 1.0 2806 4386 7192 HBL1_DMSO_200M_050219_2,7194 HBL1_DMSO_200M_050219_2,7194,IYQSKKQIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7195 38.844 45.0 1994300.0 25 0 258570.0 + 22095 LPPPVAVRK 9 71 326.2152667066333 975.6239707201 3 326.2148010134697 MULTI CID FTMS 0 0 0 7192 1188924.0 0.8470757719952314 -7 0.1828765869140625 3 Unmodified _LPPPVAVRK_ ENSG00000184271|ENST00000333640|POU6F1;nc|ENSG00000184271|Q14863|POU6F1 21.74664581756881 0.2544899275067181 4 {I|L}PPP 4 5 52.735 0.0 0.0 5.4053 0.0 0.0 0.0 568.3582095389593 568.3582095389593 45.74539712336197 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}PPP 5.4053 + + 30 + 1 1.888 75633.3 1.0 2807 4386 7192 HBL1_DMSO_200M_050219_2,7195 HBL1_DMSO_200M_050219_2,7195,LPPPVAVRK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7196 38.858 800.0 226150.0 25 0 22878.0 + 16453 KAIGSLKEV 9 172 472.792450578032 943.570348222864 2 472.7925292849541 MULTI CID FTMS 0 0 0 7192 278120.375 0.4839965247383982 4 -0.1923255920410156 4 Unmodified _KAIGSLKEV_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 87.25819977447905 0.0157581688916699 4 [KA]{I|L}SG{I|L}KEV 9 2 + 65.981 0.0 0.0 6.9926 6.9926 76.402 0.0 0.0 0.0 3.1234684152074976 20.181569293084763 3.1234684152074976 0.4575749056067479 0 1.774227503252014 0.0 0.3494850021680094 1.319341519366547 [KA]{I|L}SG{I|L}KEV;[KA]{I|L}SVAKEV;{[VA]|[{I|L}G]}S{I|L}KAKEV;{[VA]|[{I|L}G]}SAK{I|L}KEV;[KA]{I|L}SG{I|L}EKV;[KA]{I|L}A[VS]KEV;[KA]{I|L}SVAEKV;[KA]EK{I|L}KEV;[K{I|L}]ASG{I|L}KEV;{[VA]|[{I|L}G]}SKA{I|L}KEV 6.9926;6.9442;6.5853;6.3552;6.2748;6.2434;6.2263;5.9616;5.9375;5.9158 -;-;-;-;-;-;-;-;-;- 7670 1 1.888 139952.6 0.9900000095367432 2808 4386 7192 HBL1_DMSO_200M_050219_2,7196 HBL1_DMSO_200M_050219_2,7196,KAIGSLKEV True True KAIGSLKEV 38.85827 472.792529284954 8135486.5 7192.0 ENSG00000114346|ENST00000392692|ECT2;;nc|ENSG00000114346|Q9H8V3-3|ECT2;;nc|ENSG00000114346|Q9H8V3-4|ECT2;;nc|ENSG00000114346|Q9H8V3-2|ECT2 4.600366115570068 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7197 38.865 358.0 269600.0 25 0 13744.0 + 24145 LYQKEVSHL 9 118 558.8060634382952 1115.5975739433902 2 558.8063232302666 MULTI CID FTMS 0 0 0 7192 237832.03125 0.4716381884011942 4 -0.1923255920410156 5 Unmodified _LYQKEVSHL_ ENSG00000062822|ENST00000440232|POLD1;ENST00000596221.1_1_19:50920282-50921201:+|nuORF;ENST00000597963.5_1_19:50919583-50921201:+|nuORF 55.50274090549119 0.0285720310785888 4 {I|L}YQKEVS[H{I|L}] 9 0 + 83.09 0.0 0.0 7.4481 7.4481 91.291 0.0 0.0 0.0 71.67047644286136 4.13734275855272 4.13734275855272 9.208187539523763 0 1.3778623208748888 2.0 0.5941876774005248 0.3807196863200844 + + {I|L}YQKEVS[H{I|L}];{I|L}Y[AG]KEVS[H{I|L}];{I|L}YQK[KP][EP]N;{I|L}YQK{[QV]|[N{I|L}]|[RA]|[KV]}[SG]{[HG]|PP} 7.4481;6.6227;4.8929;4.5378 +;-;-;- + 194 + 1 1.888 77129.4 1.0 2809 4386 7192 HBL1_DMSO_200M_050219_2,7197 HBL1_DMSO_200M_050219_2,7197,LYQKEVSHL True True LYQKEVSHL 38.864741 558.806323230267 7151533.0 7192.0 ENST00000596221.1_1_19:50920282-50921201:+|nuORF;;ENST00000597963.5_1_19:50919583-50921201:+|nuORF;;ENSG00000062822|ENST00000440232|POLD1 7.010622660319011 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7198 38.871 331.0 299550.0 25 0 31799.0 + -1 EPMFTLAV 8 127 462.2327336185656 922.4509143039312 2 462.2330810427666 MULTI CID FTMS 0 0 0 7192 192254.515625 0.5881510893302319 -2 0.0523185729980468 6 Oxidation (M) _EPM(Oxidation (M))FTLAV_ REV__ENSG00000122012|ENST00000502798|SV2C 19.438996006549623 0.6237395211498085 4 AAAV 4 -1 34.553 0.0 0.0 3.7457 0.0 0.0 592.2631092755875 0.0 592.2631092755875 0.0 19.06804392152253 0.0 0.0 0 0.5 0.0 0.0 0.0 AAAV 3.7457 - 356 1 1.888 79285.7 1.0 2810 4386 7192 HBL1_DMSO_200M_050219_2,7198 HBL1_DMSO_200M_050219_2,7198,EPMFTLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7199 38.885 800.0 331710.0 25 0 14737.0 25277 MWVRVAPGI 9 267 343.5287861351402 1027.564529005621 3 343.5285217165947 MULTI CID FTMS 0 0 0 7192 137219.390625 0.6619422162267645 -4 0.1202468872070312 7 Unmodified _MWVRVAPGI_ nc|ENSG00000136487|P01242-2|GH2 11.640296217721598 0.521594087909532 4 MWV 3 6 26.198 0.0 0.0 2.5495 0.0 0.0 0.0 608.3634307439846 608.3634307439846 -5.154652366330215 0.0 -5.154652366330215 0.0 0 0.0 0.0 0.0 0.0 + MWV 2.5495 + + 320 + 1 1.888 214929.3 1.0 2811 4386 7192 HBL1_DMSO_200M_050219_2,7199 HBL1_DMSO_200M_050219_2,7199,MWVRVAPGI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7200 38.893 459.0 201410.0 25 0 16104.0 28253 PQTENCFQY 9 110 565.2338653531921 0 565.2347900271416 PEAK CID FTMS 0 0 0 7192 128150.9609375 1.0 0 0.0 8 Unmodified _PQTENCFQY_ chr1:206053265-206056179|26|15.38|0.64|4.59|+|0|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056179,206058429|RHEX,None|7;chr1:206053265-206056224|35|14.69|0.74|4.32|+|0|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056224,206058429|RHEX,None|7;chr1:206053265-206056227|32|13.19|0.57|4.52|+|0|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056227,206058429|RHEX,None|6 10.823927491677226 0.3028200641087142 4 Y 1 8 6.9897 0.0 0.0 0.61941 0.0 0.0 830.3208473558517 132.0459383600219 962.3667857158736 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.61941 + + 58 + 1 1.888 72121.7 1.0 2812 4386 7192 HBL1_DMSO_200M_050219_2,7200 HBL1_DMSO_200M_050219_2,7200,PQTENCFQY False False False False TE_chimeric_transcript PXD020620_cell_line HBL1_DMSO_200M_050219_2 7202 38.897 78.0 912410.0 25 0 216980.0 + -1 LEMVEWPTA 9 66 546.2579784903751 1090.50140404755 2 546.2578613162041 MULTI CID FTMS 0 0 0 7201 577841.0 0.6425442859363827 1 -0.0530319213867187 1 Oxidation (M) _LEM(Oxidation (M))VEWPTA_ REV__ENST00000378720.7_1_13:47355662-47355734:-|nuORF 4.3292370932331545 0.7635526921153418 4 {I|L} 1 -1 11.42 0.0 0.0 1.0472 0.0 0.0 959.4064771450096 0.0 959.4064771450096 0.0 7.889821653416893 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0472 + + 5 + 1 1.888 61312.4 1.0 2813 4387 7201 HBL1_DMSO_200M_050219_2,7202 HBL1_DMSO_200M_050219_2,7202,LEMVEWPTA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7203 38.911 800.0 58806.0 25 0 6029.6 12787 GVRGITHSWR 10 78 584.8199084892104 1167.6252640452208 2 584.8195068240166 MULTI CID FTMS 0 0 0 7201 64252.71484375 0.5639911978847932 1 -0.0530319213867187 2 Unmodified _GVRGITHSWR_ ENST00000301454.8_1_19:6440495-6440663:-|nuORF 1.4819007175156935 0.719781833666733 4 N 1 10 1.5938 0.0 0.0 0.1365 0.0 0.0 583.4601161954146 467.1066683404906 1050.5667845359053 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.1365 - 1 + 1 1.888 41441.4 0.6800000071525574 2814 4387 7201 HBL1_DMSO_200M_050219_2,7203 HBL1_DMSO_200M_050219_2,7203,GVRGITHSWR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7204 38.912 45.0 1942200.0 25 0 171770.0 + 32604 SAVTSVAKV 9 107 431.25564235035927 860.4967317675186 2 431.2557250857353 MULTI CID FTMS 0 0 0 7201 1040639.8125 0.018197041422198 -8 0.2378997802734375 3 Unmodified _SAVTSVAKV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 36.506200033944 0.094635877243972 4 {[SA]|[TG]}VTSVAKV 9 0 + 65.425 0.0 0.0 7.6032 7.6032 85.344 0.0 0.0 0.0 47.1367979379779 9.362915595803004 9.362915595803004 4.393326938302614 0 1.274227503252014 2.0 0.0 0.0 + + {[SA]|[TG]}VTSVAKV;{[SA]|[TG]}VTVSAKV;{[SA]|[TG]}VTSVV[KA];{[SA]|[TG]}VTA[VS]KV;{[SA]|[TG]}VTSV[KG]{I|L};{[SA]|[TG]}VTVSV[KA];{[SA]|[TG]}VTVS[KG]{I|L};{[SA]|[TG]}VTA[{I|L}T][KA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WT]|[RM]}AKV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WT]|[RM]}V[KA] 7.6032;7.0926;6.466;6.2838;6.2237;5.9555;5.7131;5.1466;1.577;0.43985 +;-;-;-;-;-;-;-;-;- + 226 + 1 1.888 73189.1 1.0 2815 4387 7201 HBL1_DMSO_200M_050219_2,7204 HBL1_DMSO_200M_050219_2,7204,SAVTSVAKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7205 38.918 318.0 582250.0 25 0 62294.0 + 23959 LVSAGELNVPD 11 126 557.2930717108634 1112.571590488527 2 557.2947265505791 MULTI CID FTMS 0 0 0 7201 309463.125 0.5380856127538878 -4 0.1369781494140625 4 Unmodified _LVSAGELNVPD_ REV__ENSG00000146147|ENST00000502396|MLIP;REV__ENST00000511744.1_1_6:53976250-54068425:+|nuORF;REV__nc|ENSG00000146147|Q5VWP3-4|MLIP 19.361941925380144 0.6323962752489956 4 {[DA]|[EG]}KE{I|L} 5 -1 23.289 0.0 0.0 2.0933 0.0 0.0 0.0 553.2619173996952 553.2619173996952 2.3295734487718924 0.0 0.0 0.0 0 0.0 0.958607314841775 1.1307196863200843 0.0 {[DA]|[EG]}KE{I|L} 2.0933 - 845 1 1.888 140523.3 1.0 2816 4387 7201 HBL1_DMSO_200M_050219_2,7205 HBL1_DMSO_200M_050219_2,7205,LVSAGELNVPD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7206 38.923 275.0 274550.0 25 0 29352.0 + 17778 KQHSGEFTV 9 108 344.84226784148365 1031.504974124651 3 344.8418151736259 MULTI CID FTMS 0 0 0 7201 291488.3125 1.0 0 0.0 5 Unmodified _KQHSGEFTV_ ENSG00000185480|ENST00000327680|PARPBP;ENST00000392914.3_1_12:102517666-102545686:+|nuORF;ENST00000541668.5_1_12:102514215-102548625:+|nuORF;nc|ENSG00000185480|Q9NWS1-3|PARPBP;nc|ENSG00000185480|Q9NWS1-4|PARPBP;nc|ENSG00000185480|Q9NWS1-6|PARPBP;nc|ENSG00000185480|Q9NWS1-7|PARPBP 14.838274106304384 0.4350285940865338 4 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F} 3 8 19.621 0.0 0.0 1.9022 0.0 0.0 0.0 635.2900536215371 635.2900536215371 2.648590849053217 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F} 1.9022 - 57 + 1 1.888 64191.8 1.0 2817 4387 7201 HBL1_DMSO_200M_050219_2,7206 HBL1_DMSO_200M_050219_2,7206,KQHSGEFTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7207 38.928 267.0 302000.0 25 0 40614.0 + 41987 VQNGKVIGV 9 106 457.2767862153559 912.5390194975116 2 457.2773315310478 MULTI CID FTMS 0 0 0 7201 209756.859375 0.4823460437994978 -2 0.0870552062988281 6 Unmodified _VQNGKVIGV_ ENSG00000057608|ENST00000380191|GDI2;nc|ENSG00000057608|P50395-2|GDI2 34.10243960390752 0.1078313939113124 4 [VG]AKRGG 7 6 27.739 0.0 0.0 3.0398 0.0 0.0 0.0 284.1580740231555 284.1580740231555 14.94759562507383 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [VG]AKRGG 3.0398 - 450 1 1.888 66177.4 1.0 2818 4387 7201 HBL1_DMSO_200M_050219_2,7207 HBL1_DMSO_200M_050219_2,7207,VQNGKVIGV True True VQNGKVIGV 38.92792 457.277331531048 3008811.75 7201.0 ENSG00000057608|ENST00000380191|GDI2;;nc|ENSG00000057608|P50395-2|GDI2 4.867047150929769 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7208 38.932 207.0 288460.0 25 0 21401.0 + 8192 EPSLRAPDL 9 104 499.2685869815552 996.5226210299104 2 499.2681457400322 MULTI CID FTMS 0 0 0 7201 151274.984375 0.4411655692510993 15 -0.7591133117675781 7 Unmodified _EPSLRAPDL_ REV__ENSG00000187690|ENST00000342995|EZHIP 30.63653989081413 0.1413794767160703 4 [EP]VRTAPEV 9 -1 + 44.821 0.0 0.0 4.4978 4.4978 81.919 0.0 0.0 0.0 15.720515383641631 12.198690202528006 12.198690202528006 13.266062568876706 0 0.6237125054200235 1.5228787452803376 0.3054621874040891 0.0 [EP]VRTAPEV;[EP]VRQ[NG]VV;{NN|[MP]|[D{I|L}]|[EV]}PRTTPVV;[EP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}A]PVV;[EP]V{[CA]|SS}[{I|L}A]PVV;{NN|[MP]|[D{I|L}]|[EV]}PRTAPEV;Q[KS]AT[PA]PTP;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PPVVPEV;[EP]VR[AG][NG]VV;[TP]AVM[PS]PVV 4.4978;3.1665;2.9202;2.7213;2.5959;2.4908;2.3619;2.2968;2.2425;2.1684 -;-;-;-;-;-;-;-;-;- 484 1 1.888 51214.0 1.0 2819 4387 7201 HBL1_DMSO_200M_050219_2,7208 HBL1_DMSO_200M_050219_2,7208,EPSLRAPDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7209 38.946 800.0 222690.0 25 0 20545.0 + 15360 IPNASQAESKV 11 162 572.3038073772084 1142.593061821217 2 572.3052856326103 MULTI CID FTMS 0 0 0 7201 133186.859375 0.8470216324443042 -1 0.055023193359375 8 Unmodified _IPNASQAESKV_ ENSG00000164924|ENST00000395958|YWHAZ;ENST00000440317.1_1_2:127315208-127315727:-|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;nc|ENSG00000164924|P63104-2|YWHAZ 53.7980654928069 0.0965963895464316 4 {I|L}PNASQAESKV 11 0 + 75.206 0.0 0.0 6.5821 6.5821 86.903 0.0 0.0 0.0 51.94192126411783 5.45818132123803 5.45818132123803 9.128498242811006 0 1.6298545532927078 1.3979400086720375 0.3054621874040891 0.6307196863200843 + + {I|L}PNASQAESKV;{I|L}PNAS[AG]AESKV;{I|L}PGGASQAESKV;{I|L}PGGAS[AG]AESKV;{I|L}PNASQ[C(Carbamidomethyl (C))R]VV;{I|L}PV[WD]AESKV;{I|L}PNAS[AG][C(Carbamidomethyl (C))R]VV;{I|L}PGGASQ[C(Carbamidomethyl (C))R]VV;{I|L}PNH{I|L}[YC(Carbamidomethyl (C))]KV;{I|L}PV[HQ][YC(Carbamidomethyl (C))]KV 6.5821;5.7832;5.7832;4.9869;4.5481;4.2456;3.746;3.746;3.1693;2.3075 +;-;-;-;-;-;-;-;-;- + 1958 + 1 1.888 132268.5 0.7200000286102295 2820 4387 7201 HBL1_DMSO_200M_050219_2,7209 HBL1_DMSO_200M_050219_2,7209,IPNASQAESKV True True IPNASQAESKV 38.94568 572.30528563261 3748480.5 7201.0 ENST00000440317.1_1_2:127315208-127315727:-|nuORF;;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;;ENSG00000164924|ENST00000395958|YWHAZ;;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;;nc|ENSG00000164924|P63104-2|YWHAZ 6.379794915517171 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7211 38.951 76.0 821740.0 25 0 89161.0 + 5795 DPPPGSHVI 9 88 459.7377035282235 917.460854123247 2 459.7375671267509 MULTI CID FTMS 0 0 0 7210 708438.25 0.0721486183328254 80 -3.4940185546875 1 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 42.09456458481378 0.0639583784996157 4 [DP]P 3 6 41.695 0.0 0.0 4.5446 0.0 0.0 0.0 605.3047316469376 605.3047316469376 25.875620045835408 0.0 0.0 0.0 0 1.0 2.0 0.4247425010840047 0.0 + [DP]P 4.5446 + + 238 1 1.88 53981.9 1.0 2821 4388 7210 HBL1_DMSO_200M_050219_2,7211 HBL1_DMSO_200M_050219_2,7211,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7212 38.952 58.0 1053800.0 25 0 129760.0 + + 306 YYYNGKAV 8 94 489.237052732431 976.459552531662 2 489.2386962771416 MULTI CID FTMS 0 0 0 7210 656298.0625 0.9940857178046552 1 -0.0665092468261718 2 Unmodified _ADVASGAGRSS_ ENST00000563760.5_1_18:52921909-52988969:-|nuORF;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-6|TCF4 9.5439744041441 0.8301188422821563 4 YYYNGKG{I|L} 8 -1 + 38.351 0.0 0.0 3.9276 3.9276 70.99 0.0 0.0 0.0 13.89761737029442 3.899710790007624 3.899710790007624 3.899710790007624 0 0.4247425010840047 2.0 0.0 0.2614393726401688 YYYNGKG{I|L};YYYNGKAV;YYYN[KQ]V;YYYGGGKG{I|L};YYY[W{I|L}]G{I|L};YYYGGGKAV;YY{[ES]|[DT]|[{I|L}C]}{I|L}[R{M(Oxidation (M))|F}];YYY[W{I|L}]AV;YYYGG[KQ]V;{[RE]|[WV]}ASC(Carbamidomethyl (C))GKG{I|L} 3.9276;3.5282;3.0502;2.9791;2.7456;2.5797;2.5043;2.3462;2.0946;1.2298 -;-;-;-;-;-;-;-;-;- 247 + 1 1.88 54259.3 1.0 2822 4388 7210 HBL1_DMSO_200M_050219_2,7212 HBL1_DMSO_200M_050219_2,7212,ADVASGAGRSS False False YYYNGKAV 38.952372 489.238696277142 4452954.0 7210.0 ENST00000563760.5_1_18:52921909-52988969:-|nuORF;;nc|ENSG00000196628|P15884-2|TCF4;;nc|ENSG00000196628|P15884-6|TCF4 1.172634224096934 2.0 False 8.0 True non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 7213 38.954 61.0 769930.0 25 0 95194.0 + 42037 VQTEVNREL 9 76 544.2911663114102 0 544.2912475466728 PEAK CID FTMS 0 0 0 7210 954793.25 0.6062699506203667 -2 0.1080551147460937 3 Unmodified _VQTEVNREL_ ENSG00000117475|ENST00000367808|BLZF1 28.49450938151212 0.124065572374239 4 TEVN 4 5 34.993 0.0 0.0 3.2205 0.0 0.0 227.12697470715085 413.2154940240844 640.3424687312353 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + TEVN 3.2205 + + 82 + 1 1.88 42194.3 1.0 2823 4388 7210 HBL1_DMSO_200M_050219_2,7213 HBL1_DMSO_200M_050219_2,7213,VQTEVNREL True True VQTEVNREL 38.953892 544.291247546673 9842428.0 7210.0 ENSG00000117475|ENST00000367808|BLZF1 4.784823576609294 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7214 38.957 159.0 707360.0 25 0 51899.0 + 32292 RWPKKSAEF 9 107 383.5453438582354 1147.6142021749065 3 383.5451537966728 MULTI CID FTMS 0 0 0 7210 351039.0 0.1734443467933345 26 -1.014728546142578 4 Unmodified _RWPKKSAEF_ ENSG00000265681|ENST00000580261|RPL17;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;nc|ENSG00000265681|P18621-2|RPL17;nc|ENSG00000265681|P18621-3|RPL17 27.628801355627647 0.1796483985696185 4 [WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F} 9 0 + 32.725 0.0 0.0 2.8516 2.8516 72.31 0.0 0.0 0.0 2.7640323731958887 20.564790766210454 2.7640323731958887 7.513487579716767 0 0.7302046884880937 0.958607314841775 0.3494850021680094 0.0 + + [WR][KP]K{[SA]|[TG]}E{M(Oxidation (M))|F};[WR][KP]K{[SA]|[TG]}{M(Oxidation (M))|F}E;[KP][WR]K{[SA]|[TG]}E{M(Oxidation (M))|F};[KP][WR]K{[SA]|[TG]}{M(Oxidation (M))|F}E 2.8516;2.1968;1.6005;0.94579 +;-;-;- + 147 1 1.88 97181.2 1.0 2824 4388 7210 HBL1_DMSO_200M_050219_2,7214 HBL1_DMSO_200M_050219_2,7214,RWPKKSAEF False True RWPKKSAEF 38.957024 383.545153796673 549401436.0 7210.0 nc|ENSG00000265681|P18621-2|RPL17;;ENST00000582935.1_1_18:47016781-47017264:-|nuORF;;nc|ENSG00000265681|P18621-3|RPL17;;ENST00000414070.1_1_1:109535017-109535455:+|nuORF;;ENSG00000265681|ENST00000580261|RPL17 6.5701093673706055 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7215 38.96 177.0 501480.0 25 0 51015.0 + 32630 SAYGTATRI 9 116 470.24853500160486 938.4825170700096 2 470.2484924197197 MULTI CID FTMS 0 0 0 7210 331075.84375 0.6212031411887288 2 -0.0842704772949218 5 Unmodified _SAYGTATRI_ ENSG00000198730|ENST00000361367|CTR9 36.506200033944 0.094635877243972 4 {[SA]|[TG]}YGTA 6 3 50.323 0.0 0.0 5.3621 0.0 0.0 0.0 385.22284876041255 385.22284876041255 40.223703006718594 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.8807196863200843 0.0 + {[SA]|[TG]}YGTA 5.3621 + + 207 + 1 1.88 71681.2 1.0 2825 4388 7210 HBL1_DMSO_200M_050219_2,7215 HBL1_DMSO_200M_050219_2,7215,SAYGTATRI True True SAYGTATRI 38.960447 470.24849241972 6589092.5 7210.0 ENSG00000198730|ENST00000361367|CTR9 3.988329966862997 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7216 38.964 161.0 486400.0 25 0 256320.0 -1 0 75 467.2519336063222 466.2446571397222 1 467.2520324587822 MULTI CID FTMS 0 0 0 7210 325729.34375 0.7333211621316629 -1 0.0530319213867187 6 4 V 1 -1 12.474 0.0 0.0 2.6755 0.0 0.0 349.16505006140034 0.0 349.16505006140034 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.6755 - 4 + 1 1.88 65159.4 1.0 2826 4388 7210 HBL1_DMSO_200M_050219_2,7216 HBL1_DMSO_200M_050219_2,7216, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7217 38.977 800.0 272460.0 25 0 30426.0 + 45779 YYKPDSPEY 9 158 581.2585290540017 1160.5025051748032 2 581.2593871951103 MULTI CID FTMS 0 0 0 7210 160679.34375 0.0260746051489766 -8 0.2839202880859375 7 Unmodified _YYKPDSPEY_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 92.65332237495696 0.0139087009896299 4 YYVVEYYY 8 6 + 76.722 0.0 0.0 6.6111 6.6111 74.377 0.0 0.0 0.0 0.1127952313832736 16.409780573583326 0.1127952313832736 0.1127952313832736 0 1.5451140161145327 2.0 0.9947026752325154 0.0 YYVVEYYY;YYK[DP]SPEY;YY[QA]EVPEY;[DP]SKPEYYY;YYV[DN]VPEY;[DP]NVVEYYY;[PS]DKPEYYY;[DP]KSPEYYY;[EP]S[DP]KYYY;YYVV[DN]PEY 6.6111;6.6014;6.3354;6.0679;5.9045;5.7914;5.5711;5.5149;5.5146;5.4494 -;+;-;-;-;-;-;-;-;- + 4723 1 1.88 161558.9 0.7799999713897705 2827 4388 7210 HBL1_DMSO_200M_050219_2,7217 HBL1_DMSO_200M_050219_2,7217,YYKPDSPEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7218 38.985 399.0 292160.0 25 0 22358.0 + 27026 PEMTCGCVWP 10 136 561.7232820376338 1121.4320111420675 2 561.7202636599541 MULTI CID FTMS 0 0 0 7210 124051.96875 0.3952019603681325 3 -0.1201934814453125 8 Unmodified _PEMTCGCVWP_ REV__ENSG00000183908|ENST00000497933|LRRC55 14.838274106304384 0.5985701837916485 4 [EP]M 3 -1 32.447 0.0 0.0 2.8934 0.0 0.0 0.0 761.2724032673408 761.2724032673408 5.132425261499655 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5 0.0 [EP]M 2.8934 + + 78 1 1.88 91165.0 1.0 2828 4388 7210 HBL1_DMSO_200M_050219_2,7218 HBL1_DMSO_200M_050219_2,7218,PEMTCGCVWP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7219 38.998 800.0 333870.0 25 0 20144.0 41881 VPYTPRRL 8 249 334.5346410367197 1000.582093710359 3 334.5345336794853 MULTI CID FTMS 0 0 0 7210 132806.078125 0.4703560114183613 -4 0.1603736877441406 9 Unmodified _VPYTPRRL_ ENSG00000176473|ENST00000402312|WDR25 16.942295170755138 0.6606234159769251 4 V{I|L}P 3 6 26.265 0.0 0.0 2.625 0.0 0.0 0.0 688.3540165370621 688.3540165370621 18.202017080578337 0.0 0.0 0.0 0 0.0067180366000753 0.0 0.0 0.0 V{I|L}P 2.625 - 88 + 1 1.88 209225.6 0.5299999713897705 2829 4388 7210 HBL1_DMSO_200M_050219_2,7219 HBL1_DMSO_200M_050219_2,7219,VPYTPRRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7220 39.012 800.0 313520.0 25 0 19509.0 + 18350 KVLPRIHDV 9 217 359.5575409370995 1075.6507934114984 3 359.5572082400322 MULTI CID FTMS 0 0 0 7210 91496.2578125 0.6391789380179556 -2 0.1080551147460937 10 Unmodified _KVLPRIHDV_ ENSG00000138095|ENST00000260665|LRPPRC 12.872603262515298 0.4882369880199512 4 KV{I|L}V 4 5 22.652 0.0 0.0 2.1058 0.0 0.0 0.0 633.3114250946392 633.3114250946392 3.77758779335053 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KV{I|L}V 2.1058 - 438 + 1 1.88 201614.2 0.4600000083446502 2830 4388 7210 HBL1_DMSO_200M_050219_2,7220 HBL1_DMSO_200M_050219_2,7220,KVLPRIHDV False True KVLPRIHDV 39.012207 359.557208240032 848746.375 7210.0 ENSG00000138095|ENST00000260665|LRPPRC 1.060848633448283 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7222 39.018 213.0 294930.0 25 0 45282.0 + -1 NITGTKLGPM 10 101 524.2764670960572 1046.5383812589143 2 524.2789184451103 MULTI CID FTMS 0 0 0 7221 186446.609375 0.8749858019738135 -5 0.2268829345703125 1 Oxidation (M) _NITGTKLGPM(Oxidation (M))_ REV__ENSG00000112200|ENST00000370706|ZNF451;REV__ENST00000444273.6_1_6:56954967-57015704:+|nuORF;REV__nc|ENSG00000112200|Q9Y4E5-2|ZNF451 16.149105407346934 0.5765757077271437 4 [DG]{M(Oxidation (M))|F}{I|L} 4 -1 18.672 0.0 0.0 1.7842 0.0 0.0 0.0 611.3174532525999 611.3174532525999 0.657205584423366 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 [DG]{M(Oxidation (M))|F}{I|L} 1.7842 - 91 + 1 1.88 54432.5 1.0 2831 4389 7221 HBL1_DMSO_200M_050219_2,7222 HBL1_DMSO_200M_050219_2,7222,NITGTKLGPM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7223 39.026 442.0 268350.0 25 0 27982.0 -1 0 151 486.25354405219537 485.2462675855954 1 486.2530090212822 MULTI CID FTMS 0 0 0 7221 217952.15625 0.9896866796548988 7 -0.2291107177734375 2 4 [VS]TA 4 -1 15.913 0.0 0.0 3.2795 0.0 0.0 0.0 124.038387296786 124.038387296786 5.428896610403967 0.0 0.0 0.0 0 0.0 0.3979400086720376 0.8033121444636097 0.0 [VS]TA 3.2795 - 94 1 1.88 91023.8 1.0 2832 4389 7221 HBL1_DMSO_200M_050219_2,7223 HBL1_DMSO_200M_050219_2,7223, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7224 39.03 193.0 334230.0 25 0 35731.0 + -1 MPEWVVCAM 9 98 561.740631620043 1121.466710306886 2 561.7427856326103 MULTI CID FTMS 0 0 0 7221 194626.578125 0.186108863957436 -7 0.2948112487792969 3 Carbamidomethyl (C) _MPEWVVC(Carbamidomethyl (C))AM_ REV__ENSG00000032389|ENST00000382125|EIPR1 23.1484247019978 0.2366544122328345 4 MPEPA 5 -1 61.638 0.0 0.0 5.4962 0.0 0.0 0.0 593.2195528619749 593.2195528619749 49.64841568716295 0.0 0.0 0.0 0 0.8807196863200843 1.3010299956639813 0.4247425010840047 0.0 MPEPA 5.4962 - 87 + 1 1.88 55823.0 1.0 2833 4389 7221 HBL1_DMSO_200M_050219_2,7224 HBL1_DMSO_200M_050219_2,7224,MPEWVVCAM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7226 39.034 18.0 2153900.0 25 0 153180.0 + 3865 DAKLEPTNV 9 75 493.7614349654868 985.5083169977736 2 493.7614013552666 MULTI CID FTMS 0 0 0 7225 2681825.5 0.1374951460850247 7 -0.3303756713867187 1 Unmodified _DAKLEPTNV_ ENSG00000094804|ENST00000209728|CDC6 43.77239144664712 0.0547478964384323 4 {[DA]|[EG]}K{I|L}E[TP]NV 9 0 + 45.045 0.0 0.0 4.5707 4.5707 82.556 0.0 0.0 0.0 13.802112417116051 31.549764189782778 13.802112417116051 14.771212547196626 0 1.1069758080123702 1.3010299956639813 0.6861818737241735 0.0 + + {[DA]|[EG]}K{I|L}E[TP]NV;[KG]E{I|L}E[TP]NV;{[SA]|[TG]}[VG]{I|L}E[TP]NV;[TA]AA{I|L}E[TP]NV;{[SA]|[TG]}[{I|L}V]GE[TP]NV;[TA]VVGE[TP]NV;[TP][KT]E[TP]NV 4.5707;3.0719;2.5233;2.2643;1.9079;1.6489;1.3726 +;-;-;-;-;-;- + 162 1 1.876 34540.3 1.0 2834 4390 7225 HBL1_DMSO_200M_050219_2,7226 HBL1_DMSO_200M_050219_2,7226,DAKLEPTNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7227 39.036 25.0 1732600.0 25 0 240110.0 26885 PDGGLSENQCS 11 72 553.7245630101261 1105.434573087052 2 553.7252075076103 MULTI CID FTMS 0 0 0 7225 2085967.125 0.928447700887358 3 -0.05810546875 2 Unmodified _PDGGLSENQCS_ ENST00000425406.5_1_7:86811523-86817410:+|nuORF 13.614867670302877 0.751941774060705 4 YYGSQYYY 8 9 + 65.31 0.0 0.0 5.9081 5.9081 86.102 0.0 0.0 0.0 17.52574989159953 44.34115329172698 17.52574989159953 9.262137858390815 0 0.8182503180159344 2.0 0.7742275032520141 0.0 YYGSQYYY;YYGS[AG]YYY;SQEYQS{[DS]|[MA]|[CV]|TT}Y;[DP]NGSQYYY;[DP]GGGSQYYY;[DP]GNSQYYY;[DP]NGS[AG]YYY;[DP]GGGS[AG]YYY;SQEYQ[YV]CS;[DP]EEQ[HQ]HS 5.9081;5.0702;4.2533;3.981;3.9396;3.1687;3.148;3.1105;2.9413;2.3615 -;-;-;-;-;-;-;-;-;- 452 1 1.876 39055.5 1.0 2835 4390 7225 HBL1_DMSO_200M_050219_2,7227 HBL1_DMSO_200M_050219_2,7227,PDGGLSENQCS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7228 39.037 59.0 704900.0 25 0 97034.0 -1 GEVCCWLCI 9 76 541.728286705154 1081.442020477108 2 541.7286254763603 MULTI CID FTMS 0 0 0 7225 1018334.25 0.912965582610666 1 -0.0359230041503906 3 Carbamidomethyl (C) _GEVC(Carbamidomethyl (C))CWLCI_ ENSG00000164082|ENST00000395052|GRM2;ENST00000296479.9_1_3:51747995-51752125:+|nuORF 18.13498045792455 0.3457906370836843 4 {[DA]|[EG]}VP[HV]S 7 -1 46.783 0.0 0.0 4.326 0.0 0.0 0.0 373.0660799615844 373.0660799615844 27.358178818301223 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.3807196863200844 0.0 {[DA]|[EG]}VP[HV]S 4.326 - 35 + 1 1.876 41834.7 1.0 2836 4390 7225 HBL1_DMSO_200M_050219_2,7228 HBL1_DMSO_200M_050219_2,7228,GEVCCWLCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7229 39.039 76.0 851110.0 25 0 247370.0 18541 LAAAKGII 8 97 378.7526326952251 755.4907124572502 2 378.7525207400322 MULTI CID FTMS 0 0 0 7225 617823.8125 0.4670982666978784 4 -0.0964241027832031 4 Unmodified _LAAAKGII_ ENSG00000157184|ENST00000371486|CPT2 19.438996006549623 0.6237395211498085 4 {I|L}A 2 6 38.188 0.0 0.0 5.0547 0.0 0.0 0.0 568.3490084283811 568.3490084283811 24.82271233039569 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + {I|L}A 5.0547 + + 181 + 1 1.876 53971.0 1.0 2837 4390 7225 HBL1_DMSO_200M_050219_2,7229 HBL1_DMSO_200M_050219_2,7229,LAAAKGII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7230 39.043 194.0 355330.0 25 0 27261.0 -1 HCVSPEQL 8 112 485.2266800192393 968.4388071052788 2 485.2267028689384 MULTI CID FTMS 0 0 0 7225 182347.796875 1.0 0 0.0 5 Carbamidomethyl (C) _HC(Carbamidomethyl (C))VSPEQL_ nc|ENSG00000197558|A2VEC9-2|SSPOP;nc|ENSG00000197558|A2VEC9|SSPOP 14.581692164780916 0.6954967302934248 4 SP 2 -1 39.949 0.0 0.0 4.125 0.0 0.0 0.0 781.3335665338499 781.3335665338499 16.11809917757732 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 SP 4.125 + + 186 + 1 1.876 56164.1 1.0 2838 4390 7225 HBL1_DMSO_200M_050219_2,7230 HBL1_DMSO_200M_050219_2,7230,HCVSPEQL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7231 39.045 113.0 457770.0 25 0 57347.0 + 35917 SVPDLSPPSF 10 89 523.2635624544467 1044.5125719756934 2 523.2651244997978 MULTI CID FTMS 0 0 0 7225 149967.078125 0.7272375628526124 -3 0.1373023986816406 6 Unmodified _SVPDLSPPSF_ REV__chr19:58306216-58312169|16|11.12|0.0|20.09|+|0|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,acceptor,+,58312169,58313278|ZNF8-ERVK3-1,None|4;REV__chr19:58306216-58312266|18|11.0|0.0|20.07|+|2|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,acceptor,+,58312266,58313278|ZNF8-ERVK3-1,None|5 13.90604991867851 0.6142120002215601 4 [VS]Y 3 -1 30.458 0.0 0.0 2.916 0.0 0.0 0.0 692.3300611331555 692.3300611331555 7.525749891599531 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]Y 2.916 - 93 + 1 1.876 47940.5 1.0 2839 4390 7225 HBL1_DMSO_200M_050219_2,7231 HBL1_DMSO_200M_050219_2,7231,SVPDLSPPSF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7232 39.052 402.0 260160.0 25 0 44661.0 30022 QTLTNLVSA 9 127 473.7639303088656 945.5133076845312 2 473.7635070681572 MULTI CID FTMS 0 0 0 7225 157984.125 0.3335251383549304 -5 0.2243576049804687 7 Unmodified _QTLTNLVSA_ ENST00000454309.6_1_3:192126033-192126612:-|nuORF 24.020572477871973 0.2255576514309169 4 ASA 3 7 21.616 0.0 0.0 2.2861 0.0 0.0 698.3969269245687 0.0 698.3969269245687 0.0 10.844852394487598 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 ASA 2.2861 - 786 + 1 1.876 88769.9 1.0 2840 4390 7225 HBL1_DMSO_200M_050219_2,7232 HBL1_DMSO_200M_050219_2,7232,QTLTNLVSA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7233 39.066 800.0 134460.0 25 0 7889.9 + -1 IHCYARQCYYQ 11 106 781.3373636574155 1560.660174381631 2 781.8387939333916 MULTI CID FTMS 0 0 0 7225 98241.09375 0.6707711025071276 -4 0.1923255920410156 8 2 Carbamidomethyl (C) _IHC(Carbamidomethyl (C))YARQC(Carbamidomethyl (C))YYQ_ REV__ENSG00000165416|ENST00000310528|SUGT1;REV__ENST00000607588.1_1_13:52743381-52745380:-|nuORF;REV__nc|ENSG00000165416|Q9Y2Z0|SUGT1 13.042465956692816 0.7638483625850725 4 {M(Oxidation (M))|F}ANQQAED{[DS]|[MA]|[CV]|TT}Q 11 -1 73.423 0.0 0.0 4.7046 0.0 0.0 309.1336846494808 0.0 309.1336846494808 0.0 49.522311053335926 0.0 0.0 0 0.8494850021680094 0.0 0.0 1.6237125054200234 {M(Oxidation (M))|F}ANQQAED{[DS]|[MA]|[CV]|TT}Q 4.7046 - 960 + 1 1.876 77866.4 0.5899999737739563 2841 4390 7225 HBL1_DMSO_200M_050219_2,7233 HBL1_DMSO_200M_050219_2,7233,IHCYARQCYYQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7235 39.07 7.9 7962100.0 25 0 800910.0 + 44554 YPESVGREV 9 74 518.2586288816432 1034.5027048300865 2 518.2592651247978 MULTI CID FTMS 0 0 0 7234 7939326.0 0.672404155641069 3 -0.0605010986328125 1 Unmodified _YPESVGREV_ ENSG00000170471|ENST00000262879|RALGAPB;nc|ENSG00000170471|Q86X10-3|RALGAPB;nc|ENSG00000170471|Q86X10-4|RALGAPB 24.99096001346401 0.2132109383330889 4 YPESV 5 4 66.498 0.0 0.0 6.428 0.0 0.0 0.0 456.2214249582374 456.2214249582374 37.00441289091096 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.4247425010840047 0.0 + YPESV 6.428 + + 179 + 1 1.876 54813.2 1.0 2842 4391 7234 HBL1_DMSO_200M_050219_2,7235 HBL1_DMSO_200M_050219_2,7235,YPESVGREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7236 39.071 40.0 1328500.0 25 0 111850.0 + 2069 APMSNPHTV 9 90 477.2293481201721 952.4441433071444 2 477.2290527224541 MULTI CID FTMS 0 0 0 7234 1445516.125 1.0 0 0.0 2 Unmodified _APMSNPHTV_ REV__ENSG00000068697|ENST00000175091|LAPTM4A 32.30548876998284 0.1201446275138228 4 SPAMP[HN]S{I|L} 9 -1 + 78.721 0.0 0.0 8.2651 8.2651 86.825 0.0 0.0 0.0 63.20162661041831 6.561060344227172 6.561060344227172 4.5860731484177535 0 1.7302046884880935 2.0 0.4247425010840047 0.7742275032520141 SPAMP[HN]S{I|L};SPAMP[NS]H{I|L};SPAMP{[QS]|[NT]}[HV];SPA[YG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{I|L};SP[YG]A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{I|L};SP[YQ]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{I|L};SP[YG][WK]C{I|L};[PS]A[HS][PA]{[WT]|[RM]};[PA]S[HS][PA]{[WT]|[RM]} 8.2651;7.7836;7.3658;4.978;4.453;4.0889;3.6727;3.1613;1.512 -;-;-;-;-;-;-;-;- 816 + 1 1.876 46615.1 1.0 2843 4391 7234 HBL1_DMSO_200M_050219_2,7236 HBL1_DMSO_200M_050219_2,7236,APMSNPHTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7237 39.073 59.0 997940.0 25 0 108460.0 + 3611 DAASYVRKV 9 76 504.7772899886477 1007.5400270440956 2 504.7774230837822 MULTI CID FTMS 0 0 0 7234 1085628.375 0.6131668866341613 2 -0.0221824645996093 3 Unmodified _DAASYVRKV_ ENSG00000108946|ENST00000589228|PRKAR1A;nc|ENSG00000108946|P10644-2|PRKAR1A 35.61225514009592 0.0995432151795903 4 {[DA]|[EG]}ASYVRKV 9 0 + 65.634 0.0 0.0 6.5143 6.5143 93.135 0.0 0.0 0.0 55.037991477007935 6.605569361261303 6.605569361261303 65.63392351560398 0 1.3807196863200843 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}ASYVRKV 6.5143 + + 93 + 1 1.876 50479.1 1.0 2844 4391 7234 HBL1_DMSO_200M_050219_2,7237 HBL1_DMSO_200M_050219_2,7237,DAASYVRKV True True DAASYVRKV 39.072933 504.777423083782 20775808.0 7234.0 ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 6.01728884379069 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7239 39.077 100.0 549790.0 25 0 60339.0 -1 MECHSWSF 8 90 521.6907557059945 1041.366958478789 2 521.6916992068291 MULTI CID FTMS 0 0 0 7238 720826.6875 0.8735744572553047 5 -0.2874603271484375 1 Oxidation (M) _M(Oxidation (M))ECHSWSF_ ENST00000606930.1_1_5:150891787-150892117:+|nuORF 14.581692164780916 0.6954967302934248 4 S{M(Oxidation (M))|F} 2 -1 29.024 0.0 0.0 2.7871 0.0 0.0 789.2552608718154 0.0 789.2552608718154 0.0 12.385606273598311 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 S{M(Oxidation (M))|F} 2.7871 + + 42 + 1 1.876 50558.8 1.0 2845 4392 7238 HBL1_DMSO_200M_050219_2,7239 HBL1_DMSO_200M_050219_2,7239,MECHSWSF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7240 39.088 621.0 310600.0 25 0 51898.0 + 12053 GQDVGRYQV 9 178 511.2566672775585 1020.498781621917 2 511.2570983767509 MULTI CID FTMS 0 0 0 7238 162631.109375 0.0195149529171823 16 -0.7684669494628906 2 Unmodified _GQDVGRYQV_ ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF 32.78568957990786 0.1150597335874693 4 {[QG]|[NA]}DVQ 5 4 41.114 0.0 0.0 4.0288 0.0 0.0 0.0 490.22898279361567 490.22898279361567 27.88196635465781 0.0 0.0 0.0 0 0.9247425010840048 0.5528419686577808 0.0 0.7614393726401688 {[QG]|[NA]}DVQ 4.0288 - 809 + 1 1.876 152810.6 1.0 2846 4392 7238 HBL1_DMSO_200M_050219_2,7240 HBL1_DMSO_200M_050219_2,7240,GQDVGRYQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7242 39.104 800.0 128700.0 25 0 30818.0 -1 0 115 651.2984223003709 650.2911458337709 1 651.2993041872978 MULTI CID FTMS 0 0 0 7241 90111.234375 0.7538908829844835 1 -0.0383186340332031 1 4 MV 2 -1 16.744 0.0 0.0 2.5748 0.0 0.0 0.0 417.1458834283813 417.1458834283813 -0.5351959431462667 0.0 -0.5351959431462667 0.0 0 0.0 0.0 0.0 0.0 MV 2.5748 - 116 + 1 1.876 77831.5 0.7099999785423279 2847 4393 7241 HBL1_DMSO_200M_050219_2,7242 HBL1_DMSO_200M_050219_2,7242, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7243 39.109 265.0 540420.0 25 0 35654.0 + 21993 LPPPGVRKI 9 133 488.8188640373592 975.6231751415183 2 488.8187133669853 MULTI CID FTMS 0 0 0 7241 288553.5 0.8753046338085727 -2 0.0221824645996093 2 Unmodified _LPPPGVRKI_ ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54566383-54570502:-|nuORF 28.486842064014134 0.1687311288560894 4 {I|L}PPP 4 5 53.29 0.0 0.0 5.4621 0.0 0.0 0.0 568.3557833307249 568.3557833307249 32.65485646555199 0.0 0.0 0.0 0 0.6747425010840047 1.6989700043360187 0.0 0.0 + {I|L}PPP 5.4621 + + 395 + 1 1.876 112767.8 1.0 2848 4393 7241 HBL1_DMSO_200M_050219_2,7243 HBL1_DMSO_200M_050219_2,7243,LPPPGVRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7244 39.113 190.0 844720.0 25 0 89103.0 + 44758 YPLHKAIKV 9 134 356.8907457334391 1067.650407800517 3 356.8902465701103 MULTI CID FTMS 0 0 0 7241 280777.0625 0.7912287397585647 -1 0.0151901245117187 3 Unmodified _YPLHKAIKV_ ENSG00000185722|ENST00000341657|ANKFY1;ENST00000570934.5_1_17:4098183-4145738:-|nuORF;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;nc|ENSG00000185722|Q9P2R3-4|ANKFY1 18.373094154950223 0.3393451798331396 4 YP{I|L}HK[{I|L}A]VK 9 2 + 38.722 0.0 0.0 3.6268 3.6268 63.22 0.0 0.0 0.0 25.67580379314534 0.2996322337744317 0.2996322337744317 0.2996322337744317 0 0.0 0.9208187539523752 0.0 0.1923877696554315 YP{I|L}HK[{I|L}A]VK;YP{I|L}HK[{I|L}A]KV 3.6268;3.5988 -;+ + 235 + 1 1.876 136152.1 1.0 2849 4393 7241 HBL1_DMSO_200M_050219_2,7244 HBL1_DMSO_200M_050219_2,7244,YPLHKAIKV False True YPLHKAIKV 39.112623 356.89024657011 1795814.25 7241.0 ENST00000570934.5_1_17:4098183-4145738:-|nuORF;;nc|ENSG00000185722|Q9P2R3-4|ANKFY1;;ENSG00000185722|ENST00000341657|ANKFY1;;nc|ENSG00000185722|Q9P2R3-2|ANKFY1 2.895908991495768 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7245 39.126 800.0 55323.0 25 0 12684.0 -1 0 41 1102.8062948446468 3305.397055134141 3 1103.142626941204 MULTI CID FTMS 0 0 0 7241 74561.203125 1.0 0 0.0 4 4 E 1 -1 6.9897 0.0 0.0 0.21146 0.0 0.0 2649.168141784104 524.1629732721311 3173.3311150562354 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21146 - 4 + 1 1.876 45353.6 0.4799999892711639 2850 4393 7241 HBL1_DMSO_200M_050219_2,7245 HBL1_DMSO_200M_050219_2,7245, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7247 39.131 15.0 2082900.0 25 0 161240.0 29680 QPDFELHAI 9 68 535.2672444976168 1068.5199360620336 2 535.2675048708916 MULTI CID FTMS 0 0 0 7246 2907325.5 0.1264491309520123 8 -0.5253868103027344 1 Unmodified _QPDFELHAI_ ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4 20.453626601364224 0.2830276176381075 4 QDT[WK]A{I|L} 7 5 48.231 0.0 0.0 4.5139 0.0 0.0 208.08489075128983 0.0 208.08489075128983 0.0 34.25205716106127 0.0 0.0 0 2.0 0.0 0.0 0.0 QDT[WK]A{I|L} 4.5139 - 48 + 1 1.876 31809.3 1.0 2851 4394 7246 HBL1_DMSO_200M_050219_2,7247 HBL1_DMSO_200M_050219_2,7247,QPDFELHAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7248 39.132 37.0 2371000.0 25 0 307820.0 + 22096 LPPPVAVRK 9 67 326.2152667066333 975.6239707201 3 326.2148315310478 MULTI CID FTMS 0 0 0 7246 1374656.625 0.9794051780014824 1 -0.0489616394042968 2 Unmodified _LPPPVAVRK_ ENSG00000184271|ENST00000333640|POU6F1;nc|ENSG00000184271|Q14863|POU6F1 15.847184025352805 0.4077185912009129 4 {I|L}PPP 4 5 50.42 0.0 0.0 5.1679 0.0 0.0 0.0 568.3591275593212 568.3591275593212 34.45046257204389 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 + {I|L}PPP 5.1679 + + 35 + 1 1.876 76470.3 1.0 2852 4394 7246 HBL1_DMSO_200M_050219_2,7248 HBL1_DMSO_200M_050219_2,7248,LPPPVAVRK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7249 39.133 21.0 2429200.0 25 0 325750.0 + 6432 EADKLVVNV 9 80 493.77945753386905 985.544362134538 2 493.7796203494072 MULTI CID FTMS 0 0 0 7246 1996102.875 0.5929341912613253 -2 0.0535087585449218 3 Unmodified _EADKLVVNV_ REV__ENSG00000153310|ENST00000694912|CYRIB;REV__ENST00000523288.5_1_8:130864395-130891707:-|nuORF 21.74664581756881 0.2544899275067181 4 [KP]QST{I|L} 6 -1 30.239 0.0 0.0 3.0682 0.0 0.0 0.0 328.1516430275479 328.1516430275479 8.1246936830415 0.0 0.0 0.0 0 0.0 0.0 1.110924374808178 0.0 [KP]QST{I|L} 3.0682 - 306 1 1.876 46553.5 1.0 2853 4394 7246 HBL1_DMSO_200M_050219_2,7249 HBL1_DMSO_200M_050219_2,7249,EADKLVVNV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7250 39.139 303.0 333820.0 25 0 19744.0 -1 IYLILDLCI 9 93 568.3269742749021 1134.639395616604 2 568.3270141482353 MULTI CID FTMS 0 0 0 7246 358656.46875 0.0216707675379751 18 -0.7926177978515625 4 Carbamidomethyl (C) _IYLILDLC(Carbamidomethyl (C))I_ ENSG00000135763|ENST00000258243|URB2 42.09456458481378 0.0639583784996157 4 {I|L}YQSKV{[RE]|[WV]}{I|L} 9 -1 + 82.683 0.0 0.0 7.2872 7.2872 90.18 0.0 0.0 0.0 67.76818337488072 1.1799601197801195 1.1799601197801195 9.208187539523747 0 1.1989700043360187 2.0 0.7742275032520141 0.4247425010840047 {I|L}YQSKV{[RE]|[WV]}{I|L};{I|L}Y[AG]SKV{[RE]|[WV]}{I|L};{I|L}Y{I|L}{[ET]|[MV]}V{[RE]|[WV]}{I|L};{I|L}Y{I|L}[VP]EVV{[CT]|[{M(Oxidation (M))|F}G]};{I|L}Y{I|L}[KT][KP]C(Carbamidomethyl (C)){I|L} 7.2872;6.4756;5.3266;4.4828;4.4452 -;-;-;-;- 194 + 1 1.876 81457.3 1.0 2854 4394 7246 HBL1_DMSO_200M_050219_2,7250 HBL1_DMSO_200M_050219_2,7250,IYLILDLCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7251 39.141 111.0 719270.0 25 0 226280.0 -1 0 61 415.25391299958136 414.24663653298137 1 415.2527953982353 MULTI CID FTMS 0 0 0 7246 300568.53125 0.0026321940354823 39 -1.9871902465820312 5 4 A 1 -1 2.2185 0.0 0.0 0.53555 0.0 0.0 258.11972720856573 82.0670412652953 340.18676847386104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.53555 - 11 + 1 1.876 69202.3 1.0 2855 4394 7246 HBL1_DMSO_200M_050219_2,7251 HBL1_DMSO_200M_050219_2,7251, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7252 39.148 377.0 292330.0 25 0 30461.0 + 17370 KMAEPFTKA 9 147 511.7710798903928 1021.5276068475856 2 511.7722656130791 MULTI CID FTMS 0 0 0 7246 151513.8125 1.0 0 0.0 6 Unmodified _KMAEPFTKA_ ENSG00000124571|ENST00000265351|XPO5 16.565877749689598 0.3882643987948875 4 KM 2 7 28.271 0.0 0.0 2.7675 0.0 0.0 0.0 759.3690262675003 759.3690262675003 13.711286967760682 0.0 0.0 0.0 0 0.7302046884880938 0.0 0.0 0.0 + KM 2.7675 + + 483 + 1 1.876 87622.5 1.0 2856 4394 7246 HBL1_DMSO_200M_050219_2,7252 HBL1_DMSO_200M_050219_2,7252,KMAEPFTKA False True KMAEPFTKA 39.147798 511.772265613079 591422.6875 7246.0 ENSG00000124571|ENST00000265351|XPO5 3.217113892237345 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7253 39.162 800.0 90700.0 25 0 5788.4 -1 YYKCVYLDQP 10 116 674.819293586091 0 674.8200561404228 PEAK CID FTMS 0 0 0 7246 118371.875 0.9770846576053944 -3 0.0605010986328125 7 Carbamidomethyl (C) _YYKC(Carbamidomethyl (C))VYLDQP_ ENST00000524141.5_1_8:48625456-48625810:+|nuORF 7.289230182591677 0.3953776778296116 4 YRRD 4 -1 6.7833 0.0 0.0 0.50336 0.0 0.0 350.1843502563632 404.1472872369751 754.3316374933382 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 YRRD 0.50336 - 145 + 1 1.876 58485.8 0.7099999785423279 2857 4394 7246 HBL1_DMSO_200M_050219_2,7253 HBL1_DMSO_200M_050219_2,7253,YYKCVYLDQP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7254 39.175 800.0 103100.0 25 0 8805.7 + 28148 PPQAAVHV 8 123 409.7280035929143 817.4414542526285 2 409.7278625369072 MULTI CID FTMS 0 0 0 7246 105376.8046875 1.0 0 0.0 8 Unmodified _PPQAAVHV_ REV__ENST00000540139.5_3_11:61120480-61121493:-|nuORF;REV__ENST00000546151.5_1_11:61120480-61124010:-|nuORF 6.354104778181461 0.7857632046190106 4 V 1 -1 10.379 0.0 0.0 1.2696 0.0 0.0 700.3619463564356 0.0 700.3619463564356 0.0 0.1010169304414354 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2696 + + 59 + 1 1.876 67560.6 0.5600000023841858 2858 4394 7246 HBL1_DMSO_200M_050219_2,7254 HBL1_DMSO_200M_050219_2,7254,PPQAAVHV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7256 39.18 1.1 51089000.0 25 0 6264400.0 + 32605 SAVTSVAKV 9 76 431.25564235035927 860.4967317675186 2 431.2559692263603 MULTI CID FTMS 0 0 0 7255 57187308.0 1.0 0 0.0 1 Unmodified _SAVTSVAKV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 43.77239144664712 0.0547478964384323 4 {[SA]|[TG]}VTSVAKV 9 0 + 83.822 0.0 0.0 9.7412 9.7412 97.996 0.0 0.0 0.0 44.74668792343109 11.082268588648247 11.082268588648247 24.83288122256525 0 1.274227503252014 2.0 0.4247425010840047 0.0 + + {[SA]|[TG]}VTSVAKV;{[SA]|[TG]}VTVK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}VTKV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}GTVK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}GTKV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}SAVK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}STVK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}SAKV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}STKV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TVK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9.7412;6.8553;6.5255;4.9423;4.6125;4.3894;4.0626;4.0596;3.7328;3.5549 +;-;-;-;-;-;-;-;-;- + 209 + 1 1.876 51173.8 1.0 2859 4395 7255 HBL1_DMSO_200M_050219_2,7256 HBL1_DMSO_200M_050219_2,7256,SAVTSVAKV True True SAVTSVAKV 39.17975 431.25596922636 938137344.0 7255.0 nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27 9.434604008992514 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7257 39.182 115.0 325260.0 25 0 21741.0 + -1 MQDDNQVMV 9 83 548.2254791255309 1094.4364053178615 2 548.2260009646416 MULTI CID FTMS 0 0 0 7255 568717.4375 0.8256389359499783 5 -0.3814735412597656 2 Oxidation (M) _MQDDNQVM(Oxidation (M))V_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 31.26834338654808 0.1333407332142048 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDNQV[{M(Oxidation (M))|F}V] 9 -1 + 42.558 0.0 0.0 3.8886 3.8886 77.286 0.0 0.0 0.0 7.504311474114331 30.084099879420947 7.504311474114331 9.208187539523747 0 0.5 0.0 0.0 1.1237125054200234 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDNQV[{M(Oxidation (M))|F}V];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDGGQV[{M(Oxidation (M))|F}V];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDN[AG]V[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DDMQV[{M(Oxidation (M))|F}V];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDGG[AG]V[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DDM[AG]V[{M(Oxidation (M))|F}V] 3.8886;3.0472;3.0472;2.783;2.2099;1.9416 +;-;-;-;-;- + 133 1 1.876 34368.1 1.0 2860 4395 7255 HBL1_DMSO_200M_050219_2,7257 HBL1_DMSO_200M_050219_2,7257,MQDDNQVMV False False MQDDNQVMV 39.182164 548.226000964642 6731334.5 7255.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 8.305894692738852 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7258 39.183 36.0 2165200.0 25 0 402610.0 + 18547 LAAARLAAA 9 78 414.2584990166322 826.5024451000645 2 414.2584716677666 MULTI CID FTMS 0 0 0 7255 1810818.875 0.1433631558788098 -2 0.0872802734375 3 Unmodified _LAAARLAAA_ ENSG00000167004|ENST00000300289|PDIA3;ENST00000469684.1_1_15:44038662-44048907:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF 57.47134341890925 0.0274820932774257 4 {I|L}AAA 4 5 56.855 0.0 0.0 6.8789 0.0 0.0 0.0 497.2832125299438 497.2832125299438 32.37334396171555 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + {I|L}AAA 6.8789 + + 60 + 1 1.876 68772.5 1.0 2861 4395 7255 HBL1_DMSO_200M_050219_2,7258 HBL1_DMSO_200M_050219_2,7258,LAAARLAAA True True LAAARLAAA 39.183343 414.258471667767 141700624.0 7255.0 ENST00000471856.1_1_1:146649692-146651075:+|nuORF;;ENSG00000167004|ENST00000300289|PDIA3;;ENST00000469684.1_1_15:44038662-44048907:+|nuORF 0.3697806398073832 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7259 39.185 98.0 608030.0 25 0 52844.0 + 13638 HPRTSITVV 9 98 505.2935267284601 1008.57250052372 2 505.2940856814384 MULTI CID FTMS 0 0 0 7255 492225.90625 0.6259429740899698 -1 0.0489616394042968 4 Unmodified _HPRTSITVV_ ENSG00000077348|ENST00000221233|EXOSC5;ENST00000593523.1_1_19:41897706-41903233:-|nuORF 32.78568957990786 0.1150597335874693 4 {I|L}TVV 4 5 39.412 0.0 0.0 3.9077 0.0 0.0 578.2918568341812 0.0 578.2918568341812 0.0 20.6271442187095 0.0 0.0 0 0.8494850021680094 0.0 0.5 0.0 + {I|L}TVV 3.9077 + + 51 1 1.876 48270.7 1.0 2862 4395 7255 HBL1_DMSO_200M_050219_2,7259 HBL1_DMSO_200M_050219_2,7259,HPRTSITVV True True HPRTSITVV 39.185464 505.294085681438 11252737.0 7255.0 ENST00000593523.1_1_19:41897706-41903233:-|nuORF;;ENSG00000077348|ENST00000221233|EXOSC5 4.636708895365397 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7260 39.189 153.0 358460.0 25 0 35189.0 10973 GAPTQLLTESP 11 80 557.2930717108634 1112.571590488527 2 557.2930786013603 MULTI CID FTMS 0 0 0 7255 382827.65625 0.6656497571153783 4 -0.3248100280761719 5 Unmodified _GAPTQLLTESP_ ENSG00000167182|ENST00000376741|SP2;nc|ENSG00000167182|Q02086-2|SP2 8.155526934196011 0.8366696279279818 4 [QP][QT]{I|L}[WR]{[QG]|[NA]} 9 7 + 12.243 0.0 0.0 1.1005 1.1005 75.258 0.0 0.0 0.0 2.410423191425636 7.63921064422901 2.410423191425636 12.243304413990884 0 0.5 0.0 0.6382104921644451 0.0 [QP][QT]{I|L}[WR]{[QG]|[NA]} 1.1005 - 74 1 1.876 47507.9 1.0 2863 4395 7255 HBL1_DMSO_200M_050219_2,7260 HBL1_DMSO_200M_050219_2,7260,GAPTQLLTESP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7261 39.195 371.0 308690.0 25 0 71781.0 18748 LALRLQEAE 9 120 348.2017440968711 0 348.2017089724541 PEAK CID FTMS 0 0 0 7255 270411.25 0.7658889139076411 -2 0.0872802734375 6 Unmodified _LALRLQEAE_ ENSG00000078814|ENST00000262873|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B 4.75600775471527 0.3444685223463735 4 S 1 9 4.6041 0.0 0.0 0.66304 0.0 0.0 347.2177602003508 257.1186617486938 604.3364219490446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.66304 - 4 + 1 1.876 97995.1 1.0 2864 4395 7255 HBL1_DMSO_200M_050219_2,7261 HBL1_DMSO_200M_050219_2,7261,LALRLQEAE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7262 39.2 259.0 430710.0 25 0 31711.0 + 25302 NAFLEKKTV 9 128 525.3027238991464 1048.5908948650929 2 525.3016845583916 MULTI CID FTMS 0 0 0 7255 241371.5 0.115621977116576 -2 0.0872802734375 7 Unmodified _NAFLEKKTV_ ENSG00000196199|ENST00000361479|MPHOSPH8;nc|ENSG00000196199|Q99549-2|MPHOSPH8 67.08073823543168 0.0222274355215578 4 NA{M(Oxidation (M))|F}{I|L}EKKTV 9 0 + 103.28 0.0 0.0 9.8497 9.8497 89.352 0.0 0.0 0.0 17.659167939666332 5.365716455251544 5.365716455251544 5.365716455251544 0 1.9291746928241125 1.6989700043360187 1.079689690656103 0.0 + + NA{M(Oxidation (M))|F}{I|L}EKKTV;NA{M(Oxidation (M))|F}{I|L}EKKS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}N{I|L}EKKTV;{[MS]|[{M(Oxidation (M))|F}A]}N{I|L}EKKS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}GG{I|L}EKKTV;{[MS]|[{M(Oxidation (M))|F}A]}GG{I|L}EKKS{I|L};[{I|L}T][KC]EKKTV;{[TV]|[{I|L}S]}GK{I|L}TCKTV;{[TV]|[{I|L}S]}GK{I|L}{M(Oxidation (M))|F}{[QG]|[NA]}TV;{[TV]|[{I|L}S]}GK{I|L}{M(Oxidation (M))|F}T{[QG]|[NA]}V 9.8497;9.338;5.6312;5.1195;4.753;4.2413;3.4379;3.1884;3.172;3.0041 +;-;-;-;-;-;-;-;-;- + 1125 + 1 1.876 88325.1 1.0 2865 4395 7255 HBL1_DMSO_200M_050219_2,7262 HBL1_DMSO_200M_050219_2,7262,NAFLEKKTV True True NAFLEKKTV 39.199987 525.301684558392 26285405.375 7255.0 nc|ENSG00000196199|Q99549-2|MPHOSPH8;;ENSG00000196199|ENST00000361479|MPHOSPH8 6.692330042521159 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7263 39.203 172.0 446840.0 25 0 24053.0 + 43093 VYNASNNEL 9 118 512.2407265148009 1022.466900096402 2 512.2427856326103 MULTI CID FTMS 0 0 0 7255 185009.703125 0.015810708665882 -4 0.1094627380371093 8 Unmodified _VYNASNNEL_ ENSG00000142937|ENST00000396651|RPS8 12.531546534597751 0.4974689918368763 4 [YV]NA 4 5 26.682 0.0 0.0 2.6096 0.0 0.0 0.0 572.2249927079831 572.2249927079831 5.713337517843655 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [YV]NA 2.6096 + + 160 1 1.876 63369.7 1.0 2866 4395 7255 HBL1_DMSO_200M_050219_2,7263 HBL1_DMSO_200M_050219_2,7263,VYNASNNEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7264 39.217 800.0 318340.0 25 0 34333.0 + 21062 LPAETRQEI 9 171 528.7878359032534 1055.561118873307 2 528.7881957888603 MULTI CID FTMS 0 0 0 7255 151636.421875 0.1522708775200469 -2 0.0872802734375 9 Unmodified _LPAETRQEI_ ENSG00000089234|ENST00000419234|BRAP;nc|ENSG00000089234|Q7Z569-2|BRAP 57.72198328787511 0.0273433238377839 4 {I|L}PAE[KC]VPS{I|L} 10 5 + 88.411 0.0 0.0 8.3757 8.3757 90.166 0.0 0.0 0.0 30.000000000000007 7.492535925975076 7.492535925975076 7.492535925975076 0 1.524227503252014 1.5228787452803376 1.6605162882498865 0.3252574989159953 {I|L}PAE[KC]VPS{I|L};{I|L}PAE[KC]VPTV;{I|L}PS{[ET]|[MV]}NVPS{I|L};{I|L}PAE[KC]VTPV;{I|L}PAE[QA]NKSV;{I|L}PS{[ET]|[MV]}NVPTV;{I|L}PAAASMVPS{I|L};{I|L}PS{[ET]|[MV]}GGVPS{I|L};{I|L}PAE[QA]GGKSV;{I|L}PAE[KC][{I|L}P]SV 8.3757;7.6659;7.0589;6.7064;6.5048;6.3491;6.3075;5.8826;5.6366;5.6057 -;-;-;-;-;-;-;-;-;- 6517 + 1 1.876 203544.5 0.8500000238418579 2867 4395 7255 HBL1_DMSO_200M_050219_2,7264 HBL1_DMSO_200M_050219_2,7264,LPAETRQEI True True LPAETRQEI 39.217179 528.78819578886 6150847.5 7255.0 nc|ENSG00000089234|Q7Z569-2|BRAP;;ENSG00000089234|ENST00000419234|BRAP 4.157530148824056 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7265 39.228 593.0 410520.0 25 0 28103.0 + 12754 GVPDEMRKV 9 217 344.1843271726085 1029.5311521180256 3 344.1833373904228 MULTI CID FTMS 0 0 0 7255 140914.8125 0.6482587604317639 -2 0.0872802734375 10 Unmodified _GVPDEMRKV_ ENSG00000146263|ENST00000683635|MMS22L;ENST00000509383.5_1_6:97679279-97717985:-|nuORF 52.268347100219714 0.0353964759249114 4 [VG]PDEM[RK]V 9 0 + 61.309 0.0 0.0 5.955 5.955 76.356 0.0 0.0 0.0 10.737862141609185 2.430380486862944 2.430380486862944 2.430380486862944 0 0.3494850021680094 2.0 0.6505149978319906 0.6237125054200234 + + [VG]PDEM[RK]V;[VG]PDE[C(Carbamidomethyl (C))K]{I|L}{I|L};[VG]PDV{M(Oxidation (M))|F}{[VA]|[{I|L}G]}QV;[VG]PVD{M(Oxidation (M))|F}{[VA]|[{I|L}G]}QV;[VG]PDV{M(Oxidation (M))|F}[NG]{I|L}{I|L};[VG]PVD{M(Oxidation (M))|F}[NG]{I|L}{I|L};[VG]PDV{M(Oxidation (M))|F}{[VA]|[{I|L}G]}N{I|L};[VG]PVD{M(Oxidation (M))|F}{[VA]|[{I|L}G]}N{I|L};[VG]PMTE{[VA]|[{I|L}G]}QV;[VG]P[HS]H{[VA]|[{I|L}G]}QV 5.955;5.719;4.3467;4.2228;4.0885;3.9645;3.6472;3.5233;3.4318;3.4027 +;-;-;-;-;-;-;-;-;- + 995 + 1 1.876 203248.7 1.0 2868 4395 7255 HBL1_DMSO_200M_050219_2,7265 HBL1_DMSO_200M_050219_2,7265,GVPDEMRKV True True GVPDEMRKV 39.227543 344.183337390423 3726253.125 7255.0 ENST00000509383.5_1_6:97679279-97717985:-|nuORF;;ENSG00000146263|ENST00000683635|MMS22L 6.975435415903728 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7266 39.241 800.0 262940.0 25 0 45449.0 + -1 MPYMTREQERGHAAV 15 125 592.6148786765932 1774.8228066299794 3 592.9489623904228 MULTI CID FTMS 0 0 0 7255 106203.0234375 0.7253587231539912 -1 0.0489616394042968 11 ENSG00000173141|ENST00000309594|MRPL57 4 MPYM 4 -1 54.621 0.0 0.0 3.0776 0.0 0.0 0.0 1249.608968644867 1249.608968644867 26.40166826542434 0.0 0.0 0.0 0 0.8703715150305281 1.3979400086720375 0.0 0.0 MPYM 3.0776 - 339 + 1 1.876 158310.8 0.7400000095367432 2869 4395 7255 HBL1_DMSO_200M_050219_2,7266 HBL1_DMSO_200M_050219_2,7266, False False MPYMTREQERGHAAV 39.241378 592.948962390423 1080889.875 7255.0 ENSG00000173141|ENST00000309594|MRPL57 6.011380195617676 3.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7268 39.246 9.9 5045300.0 25 0 787700.0 + 45780 YYKPDSPEY 9 72 581.2585290540017 1160.5025051748032 2 581.2587158083916 MULTI CID FTMS 0 0 0 7267 6162292.5 1.0 0 0.0 1 Unmodified _YYKPDSPEY_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 47.74868867922204 0.0453060283459952 4 YYVVEYYY 8 6 + 58.281 0.0 0.0 5.0221 5.0221 83.853 0.0 0.0 0.0 6.19325543266271 26.62630571450393 6.19325543266271 12.94863128127119 0 1.242992819099939 2.0 0.4247425010840047 0.0 YYVVEYYY;[PS]DKPEYYY;[KP]DSPEYYY;[PS]D[EP]KYYY;[PS]DKYY[EP]Y;[TP][QT]PEYYY;[KP]DSYY[EP]Y;[TP]AASPEYYY;[PS][VG]SPEYYY;[PS]DKP[DN][EP]Y 5.0221;3.9063;3.5892;3.2584;3.2402;3.0111;2.9231;2.8457;2.644;2.4467 -;-;-;-;-;-;-;-;-;- 350 1 1.863 44088.3 1.0 2870 4396 7267 HBL1_DMSO_200M_050219_2,7268 HBL1_DMSO_200M_050219_2,7268,YYKPDSPEY True True YYKPDSPEY 39.245716 581.258715808392 126164652.0 7267.0 nc|ENSG00000163939|Q86U86-7|PBRM1;;ENSG00000163939|ENST00000707071|PBRM1;;nc|ENSG00000163939|Q86U86-8|PBRM1;;nc|ENSG00000163939|Q86U86-4|PBRM1;;nc|ENSG00000163939|Q86U86-5|PBRM1;;nc|ENSG00000163939|Q86U86|PBRM1;;nc|ENSG00000163939|Q86U86-2|PBRM1;;nc|ENSG00000163939|Q86U86-3|PBRM1;;nc|ENSG00000163939|Q86U86-6|PBRM1;;nc|ENSG00000163939|Q86U86-9|PBRM1 7.689386208852132 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7269 39.247 14.0 4038900.0 25 0 381970.0 + 14434 IFQEPTEPK 9 73 544.7857676832127 1087.5569824332254 2 544.7850829958916 MULTI CID FTMS 0 0 0 7267 4125738.25 1.0 0 0.0 2 Unmodified _IFQEPTEPK_ ENSG00000171848|ENST00000304567|RRM2;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 41.95555342248728 0.0647214845423414 4 {I|L}{M(Oxidation (M))|F}QEP{[ET]|[MV]}PK 9 0 + 60.174 0.0 0.0 5.5329 5.5329 83.733 0.0 0.0 0.0 48.58017516893504 4.358500049694527 4.358500049694527 9.208187539523747 0 0.7059771852360797 0.0 0.805462187404089 0.4247425010840047 + + {I|L}{M(Oxidation (M))|F}QEP{[ET]|[MV]}PK;{I|L}{M(Oxidation (M))|F}[AG]EP{[ET]|[MV]}PK 5.5329;4.6863 +;- + 127 + 1 1.863 50754.6 1.0 2871 4396 7267 HBL1_DMSO_200M_050219_2,7269 HBL1_DMSO_200M_050219_2,7269,IFQEPTEPK True True IFQEPTEPK 39.246893 544.785082995892 59718428.0 7267.0 ENSG00000171848|ENST00000304567|RRM2;;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;;nc|ENSG00000171848|P31350-2|RRM2 9.064724604288736 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7270 39.248 21.0 2340400.0 25 0 279030.0 + 2423 AQQPTAVQV 9 87 471.2560806544129 940.497608375626 2 471.2563354372978 MULTI CID FTMS 0 0 0 7267 2658579.5 0.6322369615578842 -1 0.0659637451171875 3 Unmodified _AQQPTAVQV_ ENSG00000066136|ENST00000447388|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 56.17704186161178 0.0281986971544335 4 [TP]AVQ[QA]QV 9 6 + 26.565 0.0 0.0 2.8245 2.8245 76.255 0.0 0.0 0.0 6.34825843726086 6.214009073017483 6.214009073017483 11.366742268222383 0 0.5682503180159344 1.0457574905606752 0.5228787452803376 0.2396518287104437 [TP]AVQ[QA]QV;{[VA]|[{I|L}G]}GA[TP][QA]QV;[TP]AV[AG][QA]QV;{[VA]|[{I|L}G]}[TP]Q[QA]QV;{[QV]|[N{I|L}]|[RA]|[KV]}A[TP][QA]QV;{[VA]|[{I|L}G]}Q[TP][QA]QV;{[VA]|[{I|L}G]}GA[TA][QP]QV;[QA]V[TP][QA]QV;{[QV]|[N{I|L}]|[RA]|[KV]}A[TA][QP]QV;{[VA]|[{I|L}G]}Q[TA][QP]QV 2.8245;1.616;1.5907;1.5675;1.2693;1.1762;0.91486;0.88883;0.3134;0.22032 -;-;-;-;-;-;-;-;-;- 205 1 1.863 42415.8 1.0 2872 4396 7267 HBL1_DMSO_200M_050219_2,7270 HBL1_DMSO_200M_050219_2,7270,AQQPTAVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7271 39.249 53.0 1229500.0 25 0 176210.0 + 12985 HAIPSMSHV 9 88 489.7451103677275 977.475667802255 2 489.7450744509697 MULTI CID FTMS 0 0 0 7267 1050795.25 0.4621941875343359 -1 0.0659637451171875 4 Unmodified _HAIPSMSHV_ ENSG00000137074|ENST00000379817|APTX;ENST00000479656.5_1_9:32974523-32984658:-|nuORF;nc|ENSG00000137074|Q7Z2E3-10|APTX;nc|ENSG00000137074|Q7Z2E3-11|APTX;nc|ENSG00000137074|Q7Z2E3-2|APTX;nc|ENSG00000137074|Q7Z2E3-3|APTX;nc|ENSG00000137074|Q7Z2E3-4|APTX;nc|ENSG00000137074|Q7Z2E3-5|APTX;nc|ENSG00000137074|Q7Z2E3-6|APTX;nc|ENSG00000137074|Q7Z2E3-8|APTX;nc|ENSG00000137074|Q7Z2E3-9|APTX;nc|ENSG00000137074|Q7Z2E3|APTX 67.34385681178166 0.0221257235307089 4 [HA]{I|L}PSMSVH 9 2 + 54.686 0.0 0.0 5.5946 5.5946 76.848 0.0 0.0 0.0 32.52390466852811 8.461149292312136 8.461149292312136 3.431336123240058 0 1.424742501084005 1.6989700043360187 0.7742275032520141 0.0 [HA]{I|L}PSMSVH;[HA]{I|L}[DC]A{I|L}VH;[HA]{I|L}[WE]SVH;[HA]{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{I|L}VH;[HA]{I|L}PE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H;[HA][YT]SP[R{M(Oxidation (M))|F}];[HA]{I|L}PS{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[HS][WE]A{I|L}VH;[{I|L}P]{[{M(Oxidation (M))|F}D]|MM}SP[R{M(Oxidation (M))|F}];[{I|L}P][DN]{[{M(Oxidation (M))|F}H]|[RQ]}VH 5.5946;5.2436;5.0939;4.7736;3.789;3.2813;2.8485;2.2465;1.4734;1.2374 -;-;-;-;-;-;-;-;-;- 247 + 1 1.863 54535.9 1.0 2873 4396 7267 HBL1_DMSO_200M_050219_2,7271 HBL1_DMSO_200M_050219_2,7271,HAIPSMSHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7272 39.252 99.0 771670.0 25 0 90515.0 + 5796 DPPPGSHVI 9 95 459.7377035282235 917.460854123247 2 459.7376281619072 MULTI CID FTMS 0 0 0 7267 753912.875 0.0767798354684803 88 -3.776809692382813 5 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 34.10243960390752 0.1078313939113124 4 [DP]P 3 6 41.695 0.0 0.0 4.5446 0.0 0.0 0.0 605.3051894106095 605.3051894106095 31.45242492728684 0.0 0.0 0.0 0 1.0 2.0 0.4247425010840047 0.0 + [DP]P 4.5446 + + 116 1 1.863 63693.6 1.0 2874 4396 7267 HBL1_DMSO_200M_050219_2,7272 HBL1_DMSO_200M_050219_2,7272,DPPPGSHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7273 39.259 413.0 316420.0 25 0 35408.0 + 16404 IYQSKVREL 9 118 379.2206432961651 1134.6401004886957 3 379.2204162478447 MULTI CID FTMS 0 0 0 7267 176117.46875 0.009072416498003 19 -0.8216094970703125 6 Unmodified _IYQSKVREL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 33.4449034751529 0.1114409586740657 4 {I|L}YQSKV{[RE]|[WV]}{I|L} 9 0 + 67.162 0.0 0.0 5.9193 5.9193 78.438 0.0 0.0 0.0 52.20168122889959 1.2274966527342457 1.2274966527342457 3.5589610259505235 0 0.3807196863200844 1.5228787452803376 0.805462187404089 0.5 + + {I|L}YQSKV{[RE]|[WV]}{I|L};{I|L}YQSKV[W{I|L}]V;{I|L}Y[AG]SKV{[RE]|[WV]}{I|L};{I|L}Y[AG]SKV[W{I|L}]V;{I|L}YQ{I|L}[KQ]{[ET]|[MV]}{I|L};{I|L}YQ{I|L}[KQ]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V;{I|L}YQ{I|L}[KQ][{M(Oxidation (M))|F}V]P 5.9193;5.6056;5.1077;4.7941;3.6996;3.3859;2.4716 +;-;-;-;-;-;- + 173 + 1 1.863 104730.0 1.0 2875 4396 7267 HBL1_DMSO_200M_050219_2,7273 HBL1_DMSO_200M_050219_2,7273,IYQSKVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7274 39.273 800.0 402440.0 25 0 24391.0 + 41882 VPYTPRRL 8 265 334.5346410367197 1000.582093710359 3 334.5344421267509 MULTI CID FTMS 0 0 0 7267 165890.109375 0.5875289089249333 4 -0.3155097961425781 7 Unmodified _VPYTPRRL_ ENSG00000176473|ENST00000402312|WDR25 34.10243960390752 0.3329570729325616 4 VPYT{I|L}RRP 8 2 + 34.978 0.0 0.0 3.4957 3.4957 67.653 0.0 0.0 0.0 19.351278086476533 3.7628094808317294 3.7628094808317294 2.9414975128932213 0 0.0673851849885577 0.3187587626244128 0.3494850021680094 1.5501648626366045 VPYT{I|L}RRP;V{I|L}{M(Oxidation (M))|F}T{I|L}RRP;VPYT{I|L}[RP]R;V{I|L}{M(Oxidation (M))|F}T{I|L}[RP]R;VPYTRR{I|L}P;V{I|L}{M(Oxidation (M))|F}TRR{I|L}P;VPYTRRP{I|L};VP{I|L}[YT]RRP;V{I|L}{M(Oxidation (M))|F}TRRP{I|L};V{I|L}P[YT]RRP 3.4957;3.2018;3.1197;2.8257;2.7429;2.4489;2.225;2.121;1.931;1.827 -;-;-;-;-;-;-;-;-;- 346 + 1 1.863 250007.9 0.6600000262260437 2876 4396 7267 HBL1_DMSO_200M_050219_2,7274 HBL1_DMSO_200M_050219_2,7274,VPYTPRRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7275 39.287 800.0 155810.0 25 0 7116.4 + 30271 QYMKEYQDAF 10 137 661.7917960415418 1321.5690391498836 2 661.7916137576103 MULTI CID FTMS 0 0 0 7267 141407.90625 0.7545039607242353 -1 0.0659637451171875 8 Unmodified _QYMKEYQDAF_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 19.256988751693697 0.5244284437930726 4 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F} 13 7 + 97.869 0.0 0.0 7.4055 7.4055 84.439 0.0 0.0 0.0 6.672268755754658 16.642078980768076 6.672268755754658 4.116329089168545 0 0.805462187404089 1.3010299956639813 0.0 2.059894379144197 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}G{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQNA{M(Oxidation (M))|F};[AG]NA{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EA[AG]QNA{M(Oxidation (M))|F};[AG]GGA{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F};[AG]GQ{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GR[MD]AQQNA{M(Oxidation (M))|F} 7.4055;7.094;6.9006;6.8846;6.719;6.719;6.719;6.6668;6.6545;6.6385 -;-;-;-;-;-;-;-;-;- 4173 1 1.863 91862.2 0.7900000214576721 2877 4396 7267 HBL1_DMSO_200M_050219_2,7275 HBL1_DMSO_200M_050219_2,7275,QYMKEYQDAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7276 39.3 800.0 184240.0 25 0 21431.0 -1 GQNPVVTPCNK 11 138 607.3023747535026 1212.590196573805 2 607.3198119997978 MULTI CID FTMS 0 0 0 -1 0 9 Carbamidomethyl (C) _GQNPVVTPC(Carbamidomethyl (C))NK_ ENSG00000111605|ENST00000435070|CPSF6;ENST00000547486.1_1_12:69645004-69651771:+|nuORF;nc|ENSG00000111605|Q16630-2|CPSF6;nc|ENSG00000111605|Q16630-3|CPSF6 10.799506525563784 0.8105043987015127 4 {I|L}[WM]SVTQG 8 -1 18.721 0.0 0.0 1.5439 0.0 0.0 0.0 307.14121490843235 307.14121490843235 6.616153199080177 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {I|L}[WM]SVTQG 1.5439 - 591 + 1 1.863 106563.9 0.800000011920929 2878 4396 7267 HBL1_DMSO_200M_050219_2,7276 HBL1_DMSO_200M_050219_2,7276,GQNPVVTPCNK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7277 39.314 800.0 242900.0 25 0 23736.0 + 21790 LPNGKPVSV 9 157 455.77158704612 909.52862115904 2 455.7717468142509 MULTI CID FTMS 0 0 0 7267 134496.28125 0.3781324957021822 -2 0.1149253845214843 10 Unmodified _LPNGKPVSV_ CTSC-RAB38|1|fusion;CTSC-RAB38|2|fusion;ENSG00000123892|ENST00000243662|RAB38 60.07390631473393 0.0260411565414776 4 {I|L}PNGK[VP]SV 9 0 + 82.405 0.0 0.0 9.0602 9.0602 93.392 0.0 0.0 0.0 33.46787486224656 10.170333392987814 10.170333392987814 9.208187539523747 0 1.152797146631619 1.6989700043360187 0.5994850021680094 0.4247425010840047 + + {I|L}PNGK[VP]SV;{I|L}PGGGK[VP]SV;{I|L}PNGK[VP]VS;{I|L}PW{I|L}[VP]SV;{I|L}PGGGK[VP]VS;{I|L}PNGK[{I|L}T]AP;{I|L}PW{I|L}[VP]VS;{I|L}PGGGK[{I|L}T]AP;VPQGK[VP]SV;{I|L}PW{I|L}[{I|L}T]AP 9.0602;8.0478;7.942;7.2688;6.9296;6.6053;6.1506;5.5929;5.1755;4.8139 +;-;-;-;-;-;-;-;-;- + 783 + 1 1.863 150533.1 0.7200000286102295 2879 4396 7267 HBL1_DMSO_200M_050219_2,7277 HBL1_DMSO_200M_050219_2,7277,LPNGKPVSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7278 39.322 365.0 257850.0 25 0 45214.0 -1 0 105 467.2519336063222 466.2446571397222 1 467.2512390017509 MULTI CID FTMS 0 0 0 7267 123110.640625 0.2771615139567803 7 -0.4303932189941406 11 4 [{M(Oxidation (M))|F}T]TV 4 -1 + 20.054 0.0 0.0 4.3012 4.3012 77.413 0.0 0.0 0.0 3.723637474483468 8.79518274795986 3.723637474483468 8.839460567940925 0 0.0 0.0 0.2887254899964357 0.0 [{M(Oxidation (M))|F}T]TV;{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T];[{M(Oxidation (M))|F}T]S{I|L} 4.3012;2.4053;2.0891 -;-;- 30 + 1 1.863 77169.1 1.0 2880 4396 7267 HBL1_DMSO_200M_050219_2,7278 HBL1_DMSO_200M_050219_2,7278, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7279 39.336 800.0 202330.0 25 0 22850.0 + 12755 GVPDEMRKV 9 168 515.7710663671535 0 515.7716552615166 PEAK CID FTMS 0 0 0 7267 111925.484375 0.8815904545650342 -1 0.0659637451171875 12 Unmodified _GVPDEMRKV_ ENSG00000146263|ENST00000683635|MMS22L;ENST00000509383.5_1_6:97679279-97717985:-|nuORF 34.40172386719151 0.0892392376003579 4 PDEM 4 5 23.593 0.0 0.0 2.2917 0.0 0.0 156.08804259470713 398.2526033990844 554.3406459937916 0.0 0.0 0.0 0.0 0 0.6694451763165201 0.0 0.4247425010840047 0.0 + PDEM 2.2917 + + 111 + 1 1.863 132187.3 0.6499999761581421 2881 4396 7267 HBL1_DMSO_200M_050219_2,7279 HBL1_DMSO_200M_050219_2,7279,GVPDEMRKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7280 39.34 188.0 493900.0 25 0 36086.0 + 38557 TSVAKVVRV 9 103 479.8056840683313 957.5968152034626 2 479.8072082400322 MULTI CID FTMS 0 0 0 7267 107791.265625 0.234340348374448 -1 0.0659637451171875 13 Unmodified _TSVAKVVRV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 66.45667989310934 0.0225072657982126 4 TSVAKVVRV 9 0 + 80.774 0.0 0.0 8.4351 8.4351 94.132 0.0 0.0 0.0 62.2742035735682 7.836455609270629 7.836455609270629 10.791812460476253 0 1.6989700043360187 1.5228787452803376 0.0 0.3252574989159953 + + TSVAKVVRV;TSVAVKVRV;TSVVAKVRV;V{[MG]|[TS]}AKVVRV;V{[MG]|[TS]}AVKVRV;V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KVVRV;V{[MG]|[TS]}VAKVRV;V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VKVRV;V[K{I|L}]S{[SA]|[TG]}VRV;V{[WT]|[RM]}AKVRV 8.4351;7.3081;6.2358;5.3582;4.2313;3.5336;3.159;2.4066;1.859;1.6993 +;-;-;-;-;-;-;-;-;- + 313 + 1 1.863 76474.9 1.0 2882 4396 7267 HBL1_DMSO_200M_050219_2,7280 HBL1_DMSO_200M_050219_2,7280,TSVAKVVRV True True TSVAKVVRV 39.339736 479.807208240032 2474091.0 7267.0 nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27 5.317316850026448 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7281 39.345 310.0 316760.0 25 0 15745.0 2428 AQQYIRQG 8 114 482.2526347707442 962.4907166082884 2 482.2551147341728 MULTI CID FTMS 0 0 0 7267 100292.25 0.432127418500269 -1 0.0659637451171875 14 Unmodified _AQQYIRQG_ ENSG00000109680|ENST00000264866|TBC1D19;ENST00000502873.5_1_4:26585743-26755545:+|nuORF;nc|ENSG00000109680|Q8N5T2-2|TBC1D19 23.1484247019978 0.5573009939494978 4 [YV]MS{I|L} 5 7 43.244 0.0 0.0 4.4929 0.0 0.0 0.0 366.1906832330688 366.1906832330688 29.30400924012389 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.5 0.0 [YV]MS{I|L} 4.4929 - 271 + 1 1.863 77292.4 1.0 2883 4396 7267 HBL1_DMSO_200M_050219_2,7281 HBL1_DMSO_200M_050219_2,7281,AQQYIRQG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7282 39.36 800.0 107850.0 25 0 5340.6 + 32218 RVVNPKAFSTA 11 120 595.3377334968944 1188.6609140605888 2 595.3379394412041 MULTI CID FTMS 0 0 0 7267 100693.1796875 0.9723858156165346 2 -0.1907882690429687 15 Unmodified _RVVNPKAFSTA_ ENSG00000168288|ENST00000303319|MMADHC 7.608950283845883 0.8392484121837455 4 A{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4 9 11.427 0.0 0.0 0.96131 0.0 0.0 693.4311390607437 0.0 693.4311390607437 0.0 9.832881222565248 0.0 0.0 0 0.0 0.0 0.0 0.0 A{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 0.96131 - 47 1 1.863 69525.2 0.6499999761581421 2884 4396 7267 HBL1_DMSO_200M_050219_2,7282 HBL1_DMSO_200M_050219_2,7282,RVVNPKAFSTA False True RVVNPKAFSTA 39.360382 595.337939441204 1128797.75 7267.0 ENSG00000168288|ENST00000303319|MMADHC 3.7311474482218414 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7284 39.365 56.0 799480.0 25 0 105290.0 + -1 RTMCSSAMY 9 77 553.7245630101261 1105.434573087052 2 553.7252685427666 MULTI CID FTMS 0 0 0 7283 1065982.125 0.4744603312687731 10 -0.44464111328125 1 Carbamidomethyl (C) _RTMC(Carbamidomethyl (C))SSAMY_ REV__ENSG00000165795|ENST00000556147|NDRG2;REV__ENST00000555650.5_1_14:21485757-21486740:-|nuORF;REV__ENST00000556716.5_1_14:21485757-21486740:-|nuORF;REV__nc|ENSG00000165795|Q9UN36-2|NDRG2;REV__nc|ENSG00000165795|Q9UN36-3|NDRG2;REV__nc|ENSG00000165795|Q9UN36-4|NDRG2;REV__nc|ENSG00000165795|Q9UN36-5|NDRG2;REV__nc|ENSG00000165795|Q9UN36-6|NDRG2 8.593279151180031 0.6146971463335029 4 YYGS 4 -1 37.664 0.0 0.0 3.4071 0.0 0.0 0.0 632.2334066654302 632.2334066654302 22.179250024847263 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 YYGS 3.4071 - 141 1 1.854 41886.4 1.0 2885 4397 7283 HBL1_DMSO_200M_050219_2,7284 HBL1_DMSO_200M_050219_2,7284,RTMCSSAMY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7285 39.367 78.0 591000.0 25 0 75378.0 + -1 MPEWVVCAM 9 63 561.740631620043 1121.466710306886 2 561.7408325076103 MULTI CID FTMS 0 0 0 7283 590024.375 0.5642023160265446 1 -0.0717620849609375 2 Carbamidomethyl (C) _MPEWVVC(Carbamidomethyl (C))AM_ REV__ENSG00000032389|ENST00000382125|EIPR1 16.942295170755138 0.3780752226737986 4 MPEPAS{[CP]|[EA]}[YQ] 10 -1 + 68.193 0.0 0.0 6.0807 6.0807 82.805 0.0 0.0 0.0 63.58857830256703 1.249387366082999 1.249387366082999 6.53212513775344 0 0.8807196863200843 1.3979400086720375 0.0 0.0 MPEPAS{[CP]|[EA]}[YQ];MPEPAS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[MT];MPE{[QN]|[E{I|L}]|[KN]}[WC(Carbamidomethyl (C))]{[SA]|[TG]};M[WH]AS{[CP]|[EA]}[YQ];M[WH]AS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[MT];M[WH]AS[W{M(Oxidation (M))|F}]{[SA]|[TG]} 6.0807;5.4982;2.8639;2.0628;1.4803;1.3689 -;-;-;-;-;- 82 + 1 1.854 41319.4 1.0 2886 4397 7283 HBL1_DMSO_200M_050219_2,7285 HBL1_DMSO_200M_050219_2,7285,MPEWVVCAM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7286 39.368 15.0 2984600.0 25 0 276050.0 + 38268 TPYGRPANI 9 57 494.7644134747128 987.5142740162256 2 494.7639648318291 MULTI CID FTMS 0 0 0 7283 3133654.5 1.0 0 0.0 3 Unmodified _TPYGRPANI_ ENSG00000174485|ENST00000443035|DENND4A;ENST00000568515.1_1_15:66007788-66048788:-|nuORF;nc|ENSG00000174485|Q7Z401-2|DENND4A;nc|ENSG00000174485|Q7Z401|DENND4A 25.399314129420983 0.2080152500878129 4 TPY{I|L} 4 5 53.175 0.0 0.0 5.3848 0.0 0.0 0.0 510.242502080725 510.242502080725 33.051987963624114 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 TPY{I|L} 5.3848 - 112 + 1 1.854 41374.8 1.0 2887 4397 7283 HBL1_DMSO_200M_050219_2,7286 HBL1_DMSO_200M_050219_2,7286,TPYGRPANI False True TPYGRPANI 39.368244 494.763964831829 38467748.0 7283.0 nc|ENSG00000174485|Q7Z401|DENND4A;;ENST00000568515.1_1_15:66007788-66048788:-|nuORF;;ENSG00000174485|ENST00000443035|DENND4A;;nc|ENSG00000174485|Q7Z401-2|DENND4A 6.557493845621745 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7287 39.369 32.0 1012900.0 25 0 71833.0 + -1 GASFNIWCL 9 62 534.2537879968465 1066.493023060493 2 534.2537109255791 MULTI CID FTMS 0 0 0 7283 1377824.625 0.8779210280247289 -1 0.1190261840820312 4 Carbamidomethyl (C) _GASFNIWC(Carbamidomethyl (C))L_ REV__ENST00000421044.1_1_3:40637993-40638476:-|nuORF 12.531546534597751 0.4974689918368763 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA 4 -1 28.416 0.0 0.0 2.6645 0.0 0.0 0.0 701.3099840802773 701.3099840802773 12.931825014007217 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA 2.6645 - 53 1 1.854 32541.5 1.0 2888 4397 7283 HBL1_DMSO_200M_050219_2,7287 HBL1_DMSO_200M_050219_2,7287,GASFNIWCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7288 39.371 93.0 1069300.0 25 0 113870.0 + 22228 LPRELSKQV 9 94 357.2173139370643 1068.630112411393 3 357.2165710330009 MULTI CID FTMS 0 0 0 7283 698653.0625 0.1305919937262284 -18 0.7055778503417969 5 Unmodified _LPRELSKQV_ ENSG00000123975|ENST00000314355|CKS2 27.628801355627647 0.1796483985696185 4 QKS[H{I|L}]VQ 7 7 30.991 0.0 0.0 2.9001 0.0 0.0 230.16440559197247 0.0 230.16440559197247 0.0 11.526880689866896 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.5941876774005248 QKS[H{I|L}]VQ 2.9001 - 269 + 1 1.854 82793.5 1.0 2889 4397 7283 HBL1_DMSO_200M_050219_2,7288 HBL1_DMSO_200M_050219_2,7288,LPRELSKQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7289 39.374 114.0 523400.0 25 0 42456.0 + 12147 GQLNGFHEA 9 101 486.7304288197296 971.4463047062592 2 486.7303649783134 MULTI CID FTMS 0 0 0 7283 467732.9375 1.0 0 0.0 6 Unmodified _GQLNGFHEA_ ENSG00000168906|ENST00000306434|MAT2A;ENST00000465151.5_1_2:85766338-85768324:+|nuORF;ENST00000469221.5_1_2:85766338-85768508:+|nuORF 21.53697664764585 0.2571576504437394 4 {[QG]|[NA]}{I|L}NG{M(Oxidation (M))|F} 6 3 26.916 0.0 0.0 2.7707 0.0 0.0 0.0 352.1263521783813 352.1263521783813 4.186004532113213 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.3807196863200844 + {[QG]|[NA]}{I|L}NG{M(Oxidation (M))|F} 2.7707 + + 458 + 1 1.854 51567.7 1.0 2890 4397 7283 HBL1_DMSO_200M_050219_2,7289 HBL1_DMSO_200M_050219_2,7289,GQLNGFHEA False True GQLNGFHEA 39.373819 486.730364978313 7240331.5 7283.0 ENST00000469221.5_1_2:85766338-85768508:+|nuORF;;ENST00000465151.5_1_2:85766338-85768324:+|nuORF;;ENSG00000168906|ENST00000306434|MAT2A 6.736984570821126 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7290 39.378 223.0 498410.0 25 0 89604.0 + 38160 TPPPPGTAI 9 123 425.7372055535758 849.4598581739516 2 425.7370788455009 MULTI CID FTMS 0 0 0 7283 403614.59375 1.0 0 0.0 7 Unmodified _TPPPPGTAI_ ENSG00000078900|ENST00000378295|TP73;ENST00000603364.5_1_1:3607439-3646013:+|nuORF;nc|ENSG00000078900|O15350-10|TP73;nc|ENSG00000078900|O15350-11|TP73;nc|ENSG00000078900|O15350-12|TP73;nc|ENSG00000078900|O15350-13|TP73;nc|ENSG00000078900|O15350-2|TP73;nc|ENSG00000078900|O15350-3|TP73;nc|ENSG00000078900|O15350-4|TP73;nc|ENSG00000078900|O15350-5|TP73;nc|ENSG00000078900|O15350-6|TP73;nc|ENSG00000078900|O15350-8|TP73;nc|ENSG00000078900|O15350-9|TP73;TBL1XR1-TP73|1|fusion;TBL1XR1-TP73|2|fusion;TBL1XR1-TP73|3|fusion;TBL1XR1-TP73|4|fusion;TBL1XR1-TP73|5|fusion;TBL1XR1-TP73|6|fusion 36.04419817259434 0.0971720506436186 4 [TP]PGPA 6 4 31.295 0.0 0.0 3.6841 0.0 0.0 0.0 326.17321353234894 326.17321353234894 13.335974376075566 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.3882104921644451 0.0 [TP]PGPA 3.6841 - 228 1 1.854 89103.8 1.0 2891 4397 7283 HBL1_DMSO_200M_050219_2,7290 HBL1_DMSO_200M_050219_2,7290,TPPPPGTAI True True TPPPPGTAI 39.378017 425.737078845501 9832913.0 7283.0 nc|ENSG00000078900|O15350-6|TP73;;ENSG00000078900|ENST00000378295|TP73;;nc|ENSG00000078900|O15350-5|TP73;;TBL1XR1-TP73|4|fusion;;nc|ENSG00000078900|O15350-12|TP73;;nc|ENSG00000078900|O15350-11|TP73;;nc|ENSG00000078900|O15350-8|TP73;;nc|ENSG00000078900|O15350-10|TP73;;nc|ENSG00000078900|O15350-9|TP73;;nc|ENSG00000078900|O15350-3|TP73;;nc|ENSG00000078900|O15350-2|TP73;;TBL1XR1-TP73|2|fusion;;TBL1XR1-TP73|5|fusion;;nc|ENSG00000078900|O15350-4|TP73;;ENST00000603364.5_1_1:3607439-3646013:+|nuORF;;TBL1XR1-TP73|6|fusion;;TBL1XR1-TP73|1|fusion;;nc|ENSG00000078900|O15350-13|TP73;;TBL1XR1-TP73|3|fusion 5.576471487681071 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7291 39.384 316.0 303740.0 25 0 21856.0 + 35633 SVAPDTINNHV 11 117 583.7938126445234 1165.5730723558468 2 583.7935668826103 MULTI CID FTMS 0 0 0 7283 306788.4375 1.0 0 0.0 8 Unmodified _SVAPDTINNHV_ ENSG00000115216|ENST00000379852|NRBP1 74.19965305603844 0.0202339408097979 4 [VS]APDT{I|L}NN[HV] 11 0 + 88.981 0.0 0.0 7.6341 7.6341 79.201 0.0 0.0 0.0 7.825160557860926 0.9691001300805624 0.9691001300805624 0.9691001300805624 0 0.9247425010840048 1.6989700043360187 1.2302046884880935 1.0501648626366045 + + [VS]APDT{I|L}NN[HV];[VS]APDT{I|L}N[HV]N;[DP]RN{I|L}TDPA[PA];[VS]APDT{I|L}GGN[HV];[VS]APDT{I|L}GG[HV]N;[VS]APDT{I|L}NGG[HV];[VS]APDT[KT]AYN;[DP]RGG{I|L}TDPA[PA];[PA][WQ]{I|L}TDPA[PA];[VS]A{M(Oxidation (M))|F}SYHVAW 7.6341;7.551;6.9091;6.851;6.7678;6.6033;6.2368;6.1259;5.5466;5.4942 +;-;-;-;-;-;-;-;-;- + 1104 + 1 1.854 74910.0 1.0 2892 4397 7283 HBL1_DMSO_200M_050219_2,7291 HBL1_DMSO_200M_050219_2,7291,SVAPDTINNHV True True SVAPDTINNHV 39.383788 583.79356688261 1625553.625 7283.0 ENSG00000115216|ENST00000379852|NRBP1 8.934436798095703 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7292 39.386 122.0 436770.0 25 0 30514.0 + -1 VLYHYVAVNNPKKQE 15 81 451.2449897685308 1800.9508532077232 4 451.4959899783134 MULTI CID FTMS 0 0 0 7283 259355.78125 1.0 0 0.0 9 ENSG00000228474|ENST00000456793|OST4 4 {[WN]|[YH]}V{I|L}YA 6 -1 24.531 0.0 0.0 1.3621 0.0 0.0 0.0 1051.550132342742 1051.550132342742 9.055008637669316 0.0 0.0 0.0 0 0.8935078169319297 1.2218487496163564 0.0 0.2742275032520141 {[WN]|[YH]}V{I|L}YA 1.3621 - 218 1 1.854 48651.2 1.0 2893 4397 7283 HBL1_DMSO_200M_050219_2,7292 HBL1_DMSO_200M_050219_2,7292, False False VLYHYVAVNNPKKQE 39.386302 451.2455 2428083.75 7283.0 ENSG00000228474|ENST00000456793|OST4 10.824297904968262 4.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7293 39.391 252.0 241070.0 25 0 24957.0 -1 MECHSWSF 8 106 521.6907557059945 1041.366958478789 2 521.6915771365166 MULTI CID FTMS 0 0 0 7283 253292.375 0.3069666437919338 10 -0.44464111328125 10 Oxidation (M) _M(Oxidation (M))ECHSWSF_ ENST00000606930.1_1_5:150891787-150892117:+|nuORF 14.581692164780916 0.6954967302934248 4 S{M(Oxidation (M))|F} 2 -1 29.464 0.0 0.0 2.8294 0.0 0.0 789.2555063076937 0.0 789.2555063076937 0.0 15.510299956639813 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 S{M(Oxidation (M))|F} 2.8294 + + 75 + 1 1.854 54079.1 1.0 2894 4397 7283 HBL1_DMSO_200M_050219_2,7293 HBL1_DMSO_200M_050219_2,7293,MECHSWSF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7294 39.395 211.0 403670.0 25 0 63490.0 + 36433 SYYGRDRSPL 10 72 405.20345231106336 1212.58852753339 3 405.2029601931572 MULTI CID FTMS 0 0 0 7283 241369.9375 0.9636873517561928 -1 0.1190261840820312 11 Unmodified _SYYGRDRSPL_ ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 17.04857598603903 0.5614834650426465 4 SY{I|L}{[DS]|[MA]|[CV]|TT}R{[WT]|[RM]}W 9 6 + 56.765 0.0 0.0 4.6813 4.6813 85.204 0.0 0.0 0.0 44.29081395446892 1.5398434942550026 1.5398434942550026 43.12112679885252 0 0.4947026752325155 2.0 0.0 0.4247425010840047 SY{I|L}{[DS]|[MA]|[CV]|TT}R{[WT]|[RM]}W;[YR][DG]R{[DS]|[MA]|[CV]|TT}{I|L}[MT] 4.6813;1.1252 -;- 77 + 1 1.854 69702.0 1.0 2895 4397 7283 HBL1_DMSO_200M_050219_2,7294 HBL1_DMSO_200M_050219_2,7294,SYYGRDRSPL False True SYYGRDRSPL 39.394994 405.202960193157 1908658.75 7283.0 ENSG00000173933|ENST00000310092|RBM4;;ENSG00000173914|ENST00000310046|RBM4B;;nc|ENSG00000239306|Q96PK6-5|RBM14 6.940582434336345 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7295 39.409 800.0 178920.0 25 0 6534.4 + 17938 KQYEAYVQA 9 176 550.2743705692927 1098.5341882053854 2 550.2740356326103 MULTI CID FTMS 0 0 0 7283 204943.46875 1.0 0 0.0 12 Unmodified _KQYEAYVQA_ ENSG00000146457|ENST00000621533|WTAP;nc|ENSG00000146457|Q15007-2|WTAP 53.832793166522166 0.0319663582346103 4 [AG]AE[YK]YV[QA] 10 5 + 48.522 0.0 0.0 4.417 4.417 77.627 0.0 0.0 0.0 9.719712763997556 7.269987279362624 7.269987279362624 8.47695185925513 0 0.8807196863200843 1.6989700043360187 0.6861818737241735 0.6989700043360187 [AG]AE[YK]YV[QA];[AG]AY[VS]AYV[QA];[AG][YK]EAYV[QA];[QA]E[YK]YV[QA];[QA]Y[VS]AYV[QA];{[CP]|[EA]}Y[KQ]YV[QA];{[CP]|[EA]}Q[YK]YV[QA];{[CP]|[EA]}Y[KG]AYV[QA];[YE]A[KQ]YV[QA];[YE][KQ]AYV[QA] 4.417;3.6453;3.6221;3.5322;3.3929;3.3046;3.2582;3.1909;3.1443;3.0723 -;-;-;-;-;-;-;-;-;- 1656 1 1.854 113242.3 0.8999999761581421 2896 4397 7283 HBL1_DMSO_200M_050219_2,7295 HBL1_DMSO_200M_050219_2,7295,KQYEAYVQA True True KQYEAYVQA 39.408832 550.27403563261 1029666.375 7283.0 ENSG00000146457|ENST00000621533|WTAP;;nc|ENSG00000146457|Q15007-2|WTAP 6.253033638000488 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7296 39.414 287.0 360090.0 25 0 42115.0 8963 FANLYIVIP 9 134 350.5378762812851 1048.5917994440554 3 350.5376464724541 MULTI CID FTMS 0 0 0 7283 192859.890625 1.0 0 0.0 13 Unmodified _FANLYIVIP_ ENSG00000181616|ENST00000322653|OR52H1 9.347437153973935 0.588369872918737 4 {[QG]|[NA]}{M(Oxidation (M))|F}{I|L}E 5 6 28.239 0.0 0.0 2.693 0.0 0.0 0.0 471.2957857721313 471.2957857721313 18.56137735557777 0.0 0.0 0.0 0 0.0 0.6020599913279624 0.0 0.0 {[QG]|[NA]}{M(Oxidation (M))|F}{I|L}E 2.693 - 70 + 1 1.854 89368.0 1.0 2897 4397 7283 HBL1_DMSO_200M_050219_2,7296 HBL1_DMSO_200M_050219_2,7296,FANLYIVIP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7297 39.418 221.0 381340.0 25 0 22813.0 -1 HAIPSMSHV 9 121 497.74278457852233 0 497.7424499392509 PEAK CID FTMS 0 0 0 7283 180994.296875 0.8768312301033881 -1 0.1190261840820312 14 Oxidation (M) _HAIPSM(Oxidation (M))SHV_ ENSG00000137074|ENST00000379817|APTX;ENST00000479656.5_1_9:32974523-32984658:-|nuORF;nc|ENSG00000137074|Q7Z2E3-10|APTX;nc|ENSG00000137074|Q7Z2E3-11|APTX;nc|ENSG00000137074|Q7Z2E3-2|APTX;nc|ENSG00000137074|Q7Z2E3-3|APTX;nc|ENSG00000137074|Q7Z2E3-4|APTX;nc|ENSG00000137074|Q7Z2E3-5|APTX;nc|ENSG00000137074|Q7Z2E3-6|APTX;nc|ENSG00000137074|Q7Z2E3-8|APTX;nc|ENSG00000137074|Q7Z2E3-9|APTX;nc|ENSG00000137074|Q7Z2E3|APTX 34.10243960390752 0.0907105591560806 4 HA{I|L}[PS]C{I|L} 7 -1 19.914 0.0 0.0 2.0045 0.0 0.0 63.99974258838274 205.07367883853752 269.0734214269203 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.0 HA{I|L}[PS]C{I|L} 2.0045 - 190 + 1 1.854 67200.7 1.0 2898 4397 7283 HBL1_DMSO_200M_050219_2,7297 HBL1_DMSO_200M_050219_2,7297,HAIPSMSHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7298 39.432 800.0 172620.0 25 0 32955.0 45369 YSTSTPFLSLP 11 142 606.8123052416476 0 606.8119994997978 PEAK CID FTMS 0 0 0 7283 172794.03125 0.7065362676164995 1 -0.0717620849609375 15 Unmodified _YSTSTPFLSLP_ nc|ENSG00000157168|Q02297-10|NRG1;nc|ENSG00000157168|Q02297-8|NRG1;nc|ENSG00000157168|Q02297-9|NRG1 5.731851221503515 0.47618401536486 4 Y 1 10 6.9897 0.0 0.0 0.57689 0.0 0.0 266.1408257202375 779.3780611627561 1045.5188868829937 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.57689 + + 34 + 1 1.854 103895.0 0.8199999928474426 2899 4397 7283 HBL1_DMSO_200M_050219_2,7298 HBL1_DMSO_200M_050219_2,7298,YSTSTPFLSLP False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7300 39.437 11.0 3847300.0 25 0 429500.0 + 32606 SAVTSVAKV 9 77 431.25564235035927 860.4967317675186 2 431.2556335330009 MULTI CID FTMS 0 0 0 7299 3896499.0 0.0681357303966817 3 -0.1713600158691406 1 Unmodified _SAVTSVAKV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 36.506200033944 0.094635877243972 4 {[SA]|[TG]}VTSVA{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 68.606 0.0 0.0 7.9728 7.9728 97.013 0.0 0.0 0.0 49.3360688456422 7.147642715192504 7.147642715192504 51.10251817814735 0 1.274227503252014 2.0 0.0 0.0 + + {[SA]|[TG]}VTSVA{[QV]|[N{I|L}]|[RA]|[KV]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WT]|[RM]}A{[QV]|[N{I|L}]|[RA]|[KV]} 7.9728;2.0341 +;- + 97 + 1 1.847 39638.5 1.0 2900 4398 7299 HBL1_DMSO_200M_050219_2,7300 HBL1_DMSO_200M_050219_2,7300,SAVTSVAKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7301 39.438 52.0 1728600.0 25 0 222480.0 22097 LPPPVAVRK 9 69 326.2152667066333 975.6239707201 3 326.2148620486259 MULTI CID FTMS 0 0 0 7299 968007.875 0.6896790863108899 5 -0.2396049499511718 2 Unmodified _LPPPVAVRK_ ENSG00000184271|ENST00000333640|POU6F1;nc|ENSG00000184271|Q14863|POU6F1 15.847184025352805 0.4077185912009129 4 {I|L}PPP 4 5 50.222 0.0 0.0 5.1476 0.0 0.0 0.0 568.3599947565061 568.3599947565061 38.2319095436452 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 + {I|L}PPP 5.1476 + + 29 + 1 1.847 77521.9 1.0 2901 4398 7299 HBL1_DMSO_200M_050219_2,7301 HBL1_DMSO_200M_050219_2,7301,LPPPVAVRK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7302 39.44 112.0 453310.0 25 0 86703.0 -1 YQAMACYDQN 10 76 611.7287821984341 1221.4430114636682 2 611.7292968630791 MULTI CID FTMS 0 0 0 7299 589235.125 0.4025678052233167 -3 0.2567520141601562 3 Oxidation (M) _YQAM(Oxidation (M))ACYDQN_ ENSG00000005108|ENST00000423059|THSD7A 9.38312468134398 0.6832340498775793 4 GYNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 7 -1 47.061 0.0 0.0 3.8529 0.0 0.0 354.0636463849625 0.0 354.0636463849625 0.0 32.45649515198938 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.4247425010840047 GYNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.8529 - 90 1 1.847 42218.7 1.0 2902 4398 7299 HBL1_DMSO_200M_050219_2,7302 HBL1_DMSO_200M_050219_2,7302,YQAMACYDQN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7303 39.445 231.0 420040.0 25 0 56995.0 30256 QYDYCNSWS 9 134 583.2181573103188 1164.4217616874375 2 583.2184936404228 MULTI CID FTMS 0 0 0 7299 406646.375 0.8247128059466957 -1 0.0717620849609375 4 Unmodified _QYDYCNSWS_ ENSG00000240053|ENST00000375864|LY6G5B;nc|ENSG00000240053|Q8NDX9-2|LY6G5B 8.155526934196011 0.6299788542272896 4 [VS]A{M(Oxidation (M))|F}DQYV 8 9 41.653 0.0 0.0 3.5772 0.0 0.0 0.0 251.9503621115188 251.9503621115188 17.85335007137462 0.0 0.0 0.0 0 1.3494850021680094 1.3979400086720375 0.5044321917401079 0.3807196863200844 [VS]A{M(Oxidation (M))|F}DQYV 3.5772 - 1152 1 1.847 75863.0 1.0 2903 4398 7299 HBL1_DMSO_200M_050219_2,7303 HBL1_DMSO_200M_050219_2,7303,QYDYCNSWS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7304 39.447 102.0 767790.0 25 0 71070.0 + 21318 LPESSRGLV 9 97 479.2720558895423 956.5295588458846 2 479.2715331912041 MULTI CID FTMS 0 0 0 7299 380755.34375 0.1931772693032182 -11 0.5394401550292969 5 Unmodified _LPESSRGLV_ ENST00000590866.2_1_19:1358969-1359134:+|nuORF 21.53697664764585 0.2571576504437394 4 {I|L}PESS 5 4 53.148 0.0 0.0 5.5564 0.0 0.0 0.0 440.2640169733032 440.2640169733032 28.711375162600703 0.0 0.0 0.0 0 0.3054621874040891 1.2218487496163564 0.3807196863200844 0.0 + {I|L}PESS 5.5564 + + 105 + 1 1.847 62072.0 1.0 2904 4398 7299 HBL1_DMSO_200M_050219_2,7304 HBL1_DMSO_200M_050219_2,7304,LPESSRGLV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7305 39.453 372.0 394850.0 25 0 55986.0 + 14217 IDNDMSHET 9 123 531.2145303126897 1060.4145076921793 2 531.2144653201103 MULTI CID FTMS 0 0 0 7299 241061.4375 0.6267247192563116 -2 0.1907882690429687 6 Unmodified _IDNDMSHET_ REV__ENSG00000152990|ENST00000334304|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-3|ADGRA3 10.823927491677226 0.5436922275383211 4 {I|L}E 2 -1 20.969 0.0 0.0 1.9774 0.0 0.0 0.0 815.265484227018 815.265484227018 5.726825097560422 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E 1.9774 - 106 + 1 1.847 116381.7 1.0 2905 4398 7299 HBL1_DMSO_200M_050219_2,7305 HBL1_DMSO_200M_050219_2,7305,IDNDMSHET False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7306 39.467 800.0 195200.0 25 0 15405.0 + -1 TDTNMENCPT 10 158 591.7255534261418 1181.4365539190835 2 591.7263061404228 MULTI CID FTMS 0 0 0 7299 185314.859375 0.2641025633031978 -4 0.3057136535644531 7 Carbamidomethyl (C) _TDTNMENC(Carbamidomethyl (C))PT_ REV__ENSG00000215440|ENST00000356091|NPEPL1;REV__ENST00000527587.5_1_20:57268807-57288710:+|nuORF;REV__ENST00000529976.5_1_20:57268807-57287813:+|nuORF;REV__ENST00000530122.1_1_20:57266543-57280604:+|nuORF;REV__nc|ENSG00000215440|Q8NDH3-2|NPEPL1;REV__nc|ENSG00000215440|Q8NDH3-3|NPEPL1;REV__nc|ENSG00000215440|Q8NDH3-4|NPEPL1;REV__nc|ENSG00000215440|Q8NDH3-5|NPEPL1 19.256988751693697 0.5244284437930726 4 SEST 4 -1 26.654 0.0 0.0 2.2561 0.0 0.0 374.1925404581525 400.0644522380101 774.2569926961626 0.0 0.0 0.0 0.0 0 1.045114016114533 0.0 0.3807196863200844 0.0 SEST 2.2561 - 347 + 1 1.847 119601.0 0.8600000143051147 2906 4398 7299 HBL1_DMSO_200M_050219_2,7306 HBL1_DMSO_200M_050219_2,7306,TDTNMENCPT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7307 39.473 344.0 401840.0 25 0 136680.0 + 5221 DIYESRHEI 9 124 387.857283545412 1160.550021236436 3 387.8556701540947 MULTI CID FTMS 0 0 0 7299 168368.65625 1.0 0 0.0 8 Unmodified _DIYESRHEI_ ENSG00000111816|ENST00000606080|FRK;nc|ENSG00000111816|P42685-2|FRK 7.608950283845883 0.6490595679007971 4 MPYES{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F} 9 6 + 41.41 0.0 0.0 3.5681 3.5681 69.871 0.0 0.0 0.0 29.41982688701461 0.9298626587642717 0.9298626587642717 3.899710790007617 0 0.1803115997617927 0.0 0.0 0.0 MPYES{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F};MPYES{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}K;MPYP{[YC]|[HE]}{I|L}K{M(Oxidation (M))|F};MP{I|L}{M(Oxidation (M))|F}{[YC]|[HE]}{I|L}K{M(Oxidation (M))|F};MPYP{[YC]|[HE]}{I|L}{M(Oxidation (M))|F}K;MPYE[RD][HT]{I|L};MPY[HC]VV{[CP]|[EA]}{I|L};MPYES{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};MPY[HC]{[{M(Oxidation (M))|F}H]|[RQ]}KV;MP{I|L}{M(Oxidation (M))|F}{[YC]|[HE]}{I|L}{M(Oxidation (M))|F}K 3.5681;3.2321;2.6229;2.3635;2.2869;2.1839;2.1736;2.1084;2.0889;2.0275 -;-;-;-;-;-;-;-;-;- 492 + 1 1.847 112688.0 1.0 2907 4398 7299 HBL1_DMSO_200M_050219_2,7307 HBL1_DMSO_200M_050219_2,7307,DIYESRHEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7308 39.487 800.0 132810.0 25 0 5386.6 + 16392 IYQSKKQIQ 9 129 568.3269742749021 1134.639395616604 2 568.3276244997978 MULTI CID FTMS 0 0 0 7299 109352.484375 0.0066073038549947 22 -1.0452842712402344 9 Unmodified _IYQSKKQIQ_ REV__ENSG00000173166|ENST00000319170|RAPH1;REV__nc|ENSG00000173166|Q70E73-2|RAPH1;REV__nc|ENSG00000173166|Q70E73-3|RAPH1;REV__nc|ENSG00000173166|Q70E73-4|RAPH1;REV__nc|ENSG00000173166|Q70E73-5|RAPH1;REV__nc|ENSG00000173166|Q70E73-6|RAPH1;REV__nc|ENSG00000173166|Q70E73-7|RAPH1;REV__nc|ENSG00000173166|Q70E73-8|RAPH1;REV__nc|ENSG00000173166|Q70E73-9|RAPH1 41.8396318013385 0.0653578398400075 4 {I|L}YQSKV 6 -1 76.063 0.0 0.0 6.7037 0.0 0.0 0.0 413.2158602350219 413.2158602350219 54.63029595722496 0.0 0.0 0.0 0 0.6421590589602533 2.0 0.7742275032520141 0.4247425010840047 {I|L}YQSKV 6.7037 - 422 + 1 1.847 85916.4 0.7200000286102295 2908 4398 7299 HBL1_DMSO_200M_050219_2,7308 HBL1_DMSO_200M_050219_2,7308,IYQSKKQIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7309 39.5 737.0 259650.0 25 0 16014.0 + 41976 VQLVTLLFT 9 210 345.21536798862223 1032.6242745660668 3 345.5498229861259 MULTI CID FTMS 0 0 0 7299 86663.359375 1.0 0 0.0 10 Unmodified _VQLVTLLFT_ REV__ENST00000586818.1_1_19:28294655-28294964:+|nuORF 4.3292370932331545 0.7635526921153418 4 {I|L} 1 -1 10.837 0.0 0.0 1.0495 0.0 0.0 901.5293934398934 0.0 901.5293934398934 0.0 0.6601677668645056 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0495 + + 152 + 1 1.847 152780.0 1.0 2909 4398 7299 HBL1_DMSO_200M_050219_2,7309 HBL1_DMSO_200M_050219_2,7309,VQLVTLLFT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7311 39.505 5.1 6024700.0 25 0 510530.0 + 43094 VYNASNNEL 9 48 512.2407265148009 1022.466900096402 2 512.2410156130791 MULTI CID FTMS 0 0 0 7310 11701544.0 1.0 0 0.0 1 Unmodified _VYNASNNEL_ ENSG00000142937|ENST00000396651|RPS8 21.74664581756881 0.2544899275067181 4 [YV]NA[WE]E{I|L} 8 3 + 41.828 0.0 0.0 4.0909 4.0909 80.628 0.0 0.0 0.0 15.910065365128716 33.53433568963817 15.910065365128716 14.262137858390812 0 0.3182503180159344 2.0 0.0 0.5 [YV]NA[WE]E{I|L};[YV]GGA[WE]E{I|L};[YN]VA[WE]E{I|L};[YN]AV[WE]E{I|L};{[QG]|[NA]}YV[WE]E{I|L} 4.0909;2.696;1.8404;1.546;1.546 -;-;-;-;- 83 1 1.841 32446.8 1.0 2910 4399 7310 HBL1_DMSO_200M_050219_2,7311 HBL1_DMSO_200M_050219_2,7311,VYNASNNEL False True VYNASNNEL 39.50456 512.241015613079 94645232.0 7310.0 ENSG00000142937|ENST00000396651|RPS8 5.965076446533203 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7312 39.506 11.0 4303000.0 25 0 1036100.0 + 1368 ALAARALAA 9 66 414.2584990166322 826.5024451000645 2 414.2584106326103 MULTI CID FTMS 0 0 0 7310 5307254.5 0.4201771721492658 2 -0.103302001953125 2 Unmodified _ALAARALAA_ REV__ENSG00000116032|ENST00000234389|GRIN3B 57.47134341890925 0.0274820932774257 4 {I|L}AAA 4 -1 58.047 0.0 0.0 7.0233 0.0 0.0 0.0 497.2851046197876 497.2851046197876 32.90356624253355 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {I|L}AAA 7.0233 - 28 + 1 1.841 41089.7 1.0 2911 4399 7310 HBL1_DMSO_200M_050219_2,7312 HBL1_DMSO_200M_050219_2,7312,ALAARALAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7313 39.507 75.0 697160.0 25 0 54347.0 + 25303 NAFLEKKTV 9 85 525.3027238991464 1048.5908948650929 2 525.3031494021416 MULTI CID FTMS 0 0 0 7310 828079.0 0.3966670927956164 2 -0.103302001953125 3 Unmodified _NAFLEKKTV_ ENSG00000196199|ENST00000361479|MPHOSPH8;nc|ENSG00000196199|Q99549-2|MPHOSPH8 40.23920728925047 0.0741434193262949 4 {[QG]|[NA]}{M(Oxidation (M))|F}{I|L}EKKTV 9 0 + 73.4 0.0 0.0 6.9998 6.9998 79.726 0.0 0.0 0.0 25.850162448297667 2.071254927956488 2.071254927956488 2.071254927956488 0 1.2302046884880935 2.0 0.3807196863200844 0.0 + + {[QG]|[NA]}{M(Oxidation (M))|F}{I|L}EKKTV;{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}EKKS{I|L} 6.9998;6.8023 +;- + 231 + 1 1.841 45443.0 1.0 2912 4399 7310 HBL1_DMSO_200M_050219_2,7313 HBL1_DMSO_200M_050219_2,7313,NAFLEKKTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7314 39.511 160.0 608340.0 25 0 93401.0 + 32343 RYPDNLKHL 9 106 385.8807338770856 1154.620372231457 3 385.8802062869072 MULTI CID FTMS 0 0 0 7310 367815.3125 1.0 0 0.0 4 Unmodified _RYPDNLKHL_ ENSG00000133773|ENST00000256151|CCDC59;ENST00000406807.2_1_6:149812705-149813218:-|nuORF;ENST00000552606.1_1_12:82750710-82752155:-|nuORF 40.72490554402381 0.0714771638475563 4 [YR][DP]N{I|L}KH{I|L} 9 0 + 60.343 0.0 0.0 5.2262 5.2262 82.435 0.0 0.0 0.0 22.532971854817525 46.363825189904695 22.532971854817525 9.208187539523747 0 1.8424778212679485 1.3010299956639813 0.0 0.5774509799928715 + + [YR][DP]N{I|L}KH{I|L};[YR][DP]GG{I|L}KH{I|L};[YR]YY{I|L}KH{I|L};[DP][YR]N{I|L}KH{I|L};[KA]C[QT]N{I|L}KH{I|L};[DP][YR]GG{I|L}KH{I|L};[KA]C[QT]GG{I|L}KH{I|L};[H{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YT]KH{I|L} 5.2262;4.4287;4.0472;2.9147;2.6175;2.1172;1.8238;0.094469 +;-;-;-;-;-;-;- + 182 1 1.841 80189.1 1.0 2913 4399 7310 HBL1_DMSO_200M_050219_2,7314 HBL1_DMSO_200M_050219_2,7314,RYPDNLKHL True True RYPDNLKHL 39.510643 385.880206286907 3668003.0 7310.0 ENST00000552606.1_1_12:82750710-82752155:-|nuORF;;ENSG00000133773|ENST00000256151|CCDC59;;ENST00000406807.2_1_6:149812705-149813218:-|nuORF 8.41353448232015 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7315 39.513 114.0 498410.0 25 0 52276.0 + 41743 VPTDPPRTI 9 90 498.2802641779709 994.5459754227418 2 498.2796203494072 MULTI CID FTMS 0 0 0 7310 237273.90625 0.0318669678737445 -16 0.744476318359375 5 Unmodified _VPTDPPRTI_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 20.41453444215458 0.284085796332423 4 VPTDP 5 4 43.153 0.0 0.0 4.339 0.0 0.0 0.0 482.2732943170532 482.2732943170532 13.923019956658308 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 0.0 0.0 + VPTDP 4.339 + + 144 + 1 1.841 49665.8 1.0 2914 4399 7310 HBL1_DMSO_200M_050219_2,7315 HBL1_DMSO_200M_050219_2,7315,VPTDPPRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7316 39.52 419.0 235790.0 25 0 20414.0 + -1 MCDRNVFVS 9 114 564.2511946703271 1126.487836407454 2 564.2522460818291 MULTI CID FTMS 0 0 0 7310 187465.140625 0.0662692976728788 -8 0.4342727661132812 6 Carbamidomethyl (C) _MC(Carbamidomethyl (C))DRNVFVS_ REV__ENST00000316836.4_1_14:74180406-74180559:-|nuORF 6.723162845929126 0.6799819581413107 4 SSVT{I|L} 5 -1 33.972 0.0 0.0 3.0158 0.0 0.0 320.15642879202284 316.04474817447505 636.2011769664979 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6549471895720984 0.0 SSVT{I|L} 3.0158 - 148 + 1 1.841 77230.8 1.0 2915 4399 7310 HBL1_DMSO_200M_050219_2,7316 HBL1_DMSO_200M_050219_2,7316,MCDRNVFVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7317 39.529 480.0 234560.0 25 0 15429.0 + 13639 HPRTSITVV 9 137 505.2935267284601 1008.57250052372 2 505.2937194705009 MULTI CID FTMS 0 0 0 7310 166242.234375 0.2114032546494992 3 -0.1516151428222656 7 Unmodified _HPRTSITVV_ ENSG00000077348|ENST00000221233|EXOSC5;ENST00000593523.1_1_19:41897706-41903233:-|nuORF 29.081581746732265 0.1611639662936252 4 EVV 3 7 38.232 0.0 0.0 3.7907 0.0 0.0 663.3811873077601 0.0 663.3811873077601 0.0 22.8701563386386 0.0 0.0 0 0.7302046884880937 0.0 0.9247425010840048 0.0 EVV 3.7907 - 195 1 1.841 88317.8 1.0 2916 4399 7310 HBL1_DMSO_200M_050219_2,7317 HBL1_DMSO_200M_050219_2,7317,HPRTSITVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7318 39.543 800.0 144670.0 25 0 18284.0 -1 0 58 1107.800184329088 3320.378723587464 3 1108.468066394329 MULTI CID FTMS 0 0 0 7310 165370.078125 0.9463928162140586 -2 0.1398200988769531 8 4 YQSE 4 -1 17.684 0.0 0.0 0.53258 0.0 0.0 2230.950727653395 579.1988619440061 2810.149589597401 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.3807196863200844 YQSE 0.53258 - 179 + 1 1.841 90718.6 0.550000011920929 2917 4399 7310 HBL1_DMSO_200M_050219_2,7318 HBL1_DMSO_200M_050219_2,7318, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7319 39.557 800.0 182280.0 25 0 7258.5 + 26999 PEKLWQYTG 9 183 561.2831258836812 1120.5516988341624 2 561.2832519412041 MULTI CID FTMS 0 0 0 7310 95925.46875 0.6268055463525194 2 -0.103302001953125 9 Unmodified _PEKLWQYTG_ REV__ENST00000372492.8_2_1:43649473-43650825:+|nuORF 18.1463463914782 0.3454829746528889 4 [EP]QSRA{I|L} 7 -1 40.098 0.0 0.0 3.5784 0.0 0.0 0.0 336.11887347699366 336.11887347699366 28.12528918491893 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.3054621874040891 0.805462187404089 [EP]QSRA{I|L} 3.5784 - 747 1 1.841 109640.9 0.5899999737739563 2918 4399 7310 HBL1_DMSO_200M_050219_2,7319 HBL1_DMSO_200M_050219_2,7319,PEKLWQYTG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7321 39.561 33.0 1228800.0 25 0 147930.0 + 2424 AQQPTAVQV 9 76 471.2560806544129 940.497608375626 2 471.2562133669853 MULTI CID FTMS 0 0 0 7320 1528866.875 0.3635799296866983 3 -0.1148834228515625 1 Unmodified _AQQPTAVQV_ ENSG00000066136|ENST00000447388|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 37.97399986684836 0.0865783450051559 4 VQV 3 6 15.898 0.0 0.0 1.6904 0.0 0.0 596.2906179439586 0.0 596.2906179439586 0.0 2.40295303156586 0.0 0.0 0 0.5440228147639203 0.0 0.0 0.0 + VQV 1.6904 + + 56 1 1.841 38655.9 1.0 2919 4400 7320 HBL1_DMSO_200M_050219_2,7321 HBL1_DMSO_200M_050219_2,7321,AQQPTAVQV True True AQQPTAVQV 39.561224 471.256213366985 92432904.0 7320.0 ENSG00000066136|ENST00000447388|NFYC;;nc|ENSG00000066136|Q13952|NFYC;;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC;;nc|ENSG00000066136|Q13952-5|NFYC;;ENST00000424419.6_1_1:41157373-41232429:+|nuORF 7.5157575607299805 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7322 39.563 101.0 466040.0 25 0 65277.0 + 45781 YYKPDSPEY 9 76 581.2585290540017 1160.5025051748032 2 581.2585937380791 MULTI CID FTMS 0 0 0 7320 400316.4375 0.0649622583640747 4 -0.173309326171875 2 Unmodified _YYKPDSPEY_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 36.12702656103203 0.0967173616627612 4 YYV{[NV]|[RG]}D[EP]Y 9 4 + 67.642 0.0 0.0 5.8287 5.8287 75.26 0.0 0.0 0.0 36.47817481888637 9.542425094393252 9.542425094393252 2.04628427264403 0 1.2302046884880935 2.0 0.4247425010840047 0.0 YYV{[NV]|[RG]}D[EP]Y;YYK[PS]D[EP]Y;YYV{[NV]|[RG]}D{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F};YYK[HC]{[RE]|[WV]}Y;YYK[PS]D{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}Y[R{M(Oxidation (M))|F}]{[RE]|[WV]}Y 5.8287;5.6523;5.0064;4.9227;4.8301;2.2287 -;-;-;-;-;- 288 + 1 1.841 40394.6 1.0 2920 4400 7320 HBL1_DMSO_200M_050219_2,7322 HBL1_DMSO_200M_050219_2,7322,YYKPDSPEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7323 39.565 71.0 1005800.0 25 0 96545.0 + 5797 DPPPGSHVI 9 108 459.7377035282235 917.460854123247 2 459.7376586794853 MULTI CID FTMS 0 0 0 7320 589570.375 0.0600429013625616 92 -3.7024154663085938 3 Unmodified _DPPPGSHVI_ ENSG00000130305|ENST00000438747|NSUN5;ENST00000471461.5_1_7:72717735-72721871:-|nuORF;nc|ENSG00000130305|Q96P11-3|NSUN5;nc|ENSG00000130305|Q96P11-4|NSUN5;nc|ENSG00000130305|Q96P11-5|NSUN5;nc|ENSG00000130305|Q96P11|NSUN5 21.74664581756881 0.2544899275067181 4 [DP]P 3 6 41.695 0.0 0.0 4.5446 0.0 0.0 0.0 605.305067340297 605.305067340297 31.650378042405904 0.0 0.0 0.0 0 1.0 2.0 0.4247425010840047 0.0 + [DP]P 4.5446 + + 148 1 1.841 59141.2 1.0 2921 4400 7320 HBL1_DMSO_200M_050219_2,7323 HBL1_DMSO_200M_050219_2,7323,DPPPGSHVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7324 39.567 107.0 796750.0 25 0 72150.0 + 41294 VPHTRPVSL 9 99 335.8664553650867 1004.57753669546 3 335.8658325076103 MULTI CID FTMS 0 0 0 7320 564737.0625 0.0195999207065698 -14 0.7191848754882812 4 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 65.47368725323818 0.0230515101691092 4 VSPV{I|L} 5 5 45.93 0.0 0.0 4.5721 0.0 0.0 491.2596607892594 0.0 491.2596607892594 0.0 2.3056137690699217 0.0 0.0 0 0.4247425010840047 0.0 1.1989700043360187 0.0 VSPV{I|L} 4.5721 - 320 1 1.841 73811.3 1.0 2922 4400 7320 HBL1_DMSO_200M_050219_2,7324 HBL1_DMSO_200M_050219_2,7324,VPHTRPVSL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7325 39.57 127.0 566580.0 25 0 80360.0 + 30697 RFQSSAVM 8 81 463.23147654016384 924.4484001471276 2 463.2316467165947 MULTI CID FTMS 0 0 0 7320 529359.875 0.0259780452193583 -11 0.5446205139160156 5 Unmodified _RFQSSAVM_ ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7 20.453626601364224 0.6087503291685402 4 VM 2 6 30.217 0.0 0.0 3.2686 0.0 0.0 676.329028664509 0.0 676.329028664509 0.0 22.76925019195368 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + VM 3.2686 + + 132 + 1 1.841 59062.0 1.0 2923 4400 7320 HBL1_DMSO_200M_050219_2,7325 HBL1_DMSO_200M_050219_2,7325,RFQSSAVM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7326 39.574 186.0 490670.0 25 0 84283.0 + 5074 DGYEQAARV 9 122 504.74182195019256 1007.4690909671853 2 504.7411682009697 MULTI CID FTMS 0 0 0 7320 485151.09375 1.0 0 0.0 6 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 56.17704186161178 0.0281986971544335 4 [DG]YEQAARV 9 0 + 64.861 0.0 0.0 6.438 6.438 87.341 0.0 0.0 0.0 51.90236967123205 7.492049162231567 7.492049162231567 9.208187539523747 0 0.8252574989159953 1.154901959985743 0.4247425010840047 0.6989700043360187 + + [DG]YEQAARV;[DG]YE[AG]AARV;[DG]YEQA{[NV]|[RG]}{I|L};[DG]YE[RN]RV;[DG]YEV[NG]RV;[DG]YERQQ{I|L};[DG]YE[AG]A{[NV]|[RG]}{I|L};[DG]YV[DN]ARV;[DG]YEV{NN|[MP]|[D{I|L}]|[EV]}VV;[DG]YER[NG]VV 6.438;5.524;5.2362;4.5315;4.4807;4.4184;4.3222;4.3091;4.0464;4.0071 +;-;-;-;-;-;-;-;-;- + 320 + 1 1.841 72226.9 1.0 2924 4400 7320 HBL1_DMSO_200M_050219_2,7326 HBL1_DMSO_200M_050219_2,7326,DGYEQAARV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7327 39.575 77.0 650830.0 25 0 76202.0 + 36295 SYIKSSSSL 9 91 486.2555492346999 970.4965455361998 2 486.2555724978447 MULTI CID FTMS 0 0 0 7320 471123.4375 0.5997998962879043 -3 0.1964836120605468 7 Unmodified _SYIKSSSSL_ ENSG00000184661|ENST00000330560|CDCA2 30.63653989081413 0.1413794767160703 4 {I|L}[MT] 3 8 17.958 0.0 0.0 1.8503 0.0 0.0 607.3180240092767 0.0 607.3180240092767 0.0 0.6125564017013794 0.0 0.0 0 0.75 0.0 0.0 0.0 {I|L}[MT] 1.8503 - 66 1 1.841 44105.8 1.0 2925 4400 7320 HBL1_DMSO_200M_050219_2,7327 HBL1_DMSO_200M_050219_2,7327,SYIKSSSSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7328 39.578 145.0 474140.0 25 0 45455.0 + 12986 HAIPSMSHV 9 96 489.7451103677275 977.475667802255 2 489.7449828982353 MULTI CID FTMS 0 0 0 7320 400850.96875 0.1763150221927228 3 -0.1148834228515625 8 Unmodified _HAIPSMSHV_ ENSG00000137074|ENST00000379817|APTX;ENST00000479656.5_1_9:32974523-32984658:-|nuORF;nc|ENSG00000137074|Q7Z2E3-10|APTX;nc|ENSG00000137074|Q7Z2E3-11|APTX;nc|ENSG00000137074|Q7Z2E3-2|APTX;nc|ENSG00000137074|Q7Z2E3-3|APTX;nc|ENSG00000137074|Q7Z2E3-4|APTX;nc|ENSG00000137074|Q7Z2E3-5|APTX;nc|ENSG00000137074|Q7Z2E3-6|APTX;nc|ENSG00000137074|Q7Z2E3-8|APTX;nc|ENSG00000137074|Q7Z2E3-9|APTX;nc|ENSG00000137074|Q7Z2E3|APTX 50.855029805455786 0.0384952370514206 4 [HA]{I|L}[DC]A{I|L}HV 9 4 + 49.446 0.0 0.0 5.0585 5.0585 78.08 0.0 0.0 0.0 6.17423111099761 6.17423111099761 6.17423111099761 6.17423111099761 0 1.329689690656103 1.6989700043360187 0.3807196863200844 0.0 [HA]{I|L}[DC]A{I|L}HV;[HA]{I|L}P{[MS]|[{M(Oxidation (M))|F}A]}SHV;[HA]{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{I|L}HV;[HA]{I|L}[WE]SHV;[HA]{I|L}P{[MS]|[{M(Oxidation (M))|F}A]}HSV;[HA]{I|L}[WE]HSV;[{I|L}P]M{[MS]|[{M(Oxidation (M))|F}A]}P[R{M(Oxidation (M))|F}];[{I|L}P]M[WE][R{M(Oxidation (M))|F}];[HS][WE]A{I|L}HV;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))H]A{I|L}HV 5.0585;4.4269;4.3958;4.3801;3.6159;3.5691;2.2433;2.2035;1.2685;1.2046 -;+;-;-;-;-;-;-;-;- + 159 1 1.841 57832.2 1.0 2926 4400 7320 HBL1_DMSO_200M_050219_2,7328 HBL1_DMSO_200M_050219_2,7328,HAIPSMSHV True True HAIPSMSHV 39.578168 489.744982898235 24602486.0 7320.0 nc|ENSG00000137074|Q7Z2E3|APTX;;nc|ENSG00000137074|Q7Z2E3-9|APTX;;nc|ENSG00000137074|Q7Z2E3-11|APTX;;nc|ENSG00000137074|Q7Z2E3-4|APTX;;nc|ENSG00000137074|Q7Z2E3-3|APTX;;ENST00000479656.5_1_9:32974523-32984658:-|nuORF;;nc|ENSG00000137074|Q7Z2E3-2|APTX;;nc|ENSG00000137074|Q7Z2E3-8|APTX;;ENSG00000137074|ENST00000379817|APTX;;nc|ENSG00000137074|Q7Z2E3-5|APTX;;nc|ENSG00000137074|Q7Z2E3-10|APTX;;nc|ENSG00000137074|Q7Z2E3-6|APTX 7.600369771321614 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7329 39.581 135.0 339620.0 25 0 27833.0 + 14435 IFQEPTEPK 9 78 544.7857676832127 1087.5569824332254 2 544.7850829958916 MULTI CID FTMS 0 0 0 7320 377989.1875 0.0916173456956461 4 -0.173309326171875 9 Unmodified _IFQEPTEPK_ ENSG00000171848|ENST00000304567|RRM2;ENST00000459969.5_1_2:10262865-10264033:+|nuORF;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 45.69961567697781 0.0497987121815769 4 {I|L}{M(Oxidation (M))|F}QE 4 5 51.983 0.0 0.0 4.7798 0.0 0.0 0.0 567.278231480155 567.278231480155 40.199785559993146 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.805462187404089 0.4247425010840047 + {I|L}{M(Oxidation (M))|F}QE 4.7798 + + 104 + 1 1.841 40523.2 1.0 2927 4400 7320 HBL1_DMSO_200M_050219_2,7329 HBL1_DMSO_200M_050219_2,7329,IFQEPTEPK True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7330 39.585 218.0 358960.0 25 0 23596.0 38147 TPPAPCLPSPI 11 115 364.86354859986193 1091.568816399786 3 364.8633300662041 MULTI CID FTMS 0 0 0 7320 236761.265625 0.1627502875490612 -9 0.490936279296875 10 Unmodified _TPPAPCLPSPI_ ENSG00000215182|ENST00000621226|MUC5AC 17.11289562659939 0.6791789249425932 4 TP 2 9 34.706 0.0 0.0 3.1795 0.0 0.0 0.0 890.4432467096311 890.4432467096311 8.146584396390253 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 + TP 3.1795 + + 485 + 1 1.841 79706.5 1.0 2928 4400 7320 HBL1_DMSO_200M_050219_2,7330 HBL1_DMSO_200M_050219_2,7330,TPPAPCLPSPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7331 39.589 237.0 296780.0 25 0 34007.0 + 21791 LPNGKPVSV 9 97 455.77158704612 909.52862115904 2 455.7717773318291 MULTI CID FTMS 0 0 0 7320 226972.453125 0.6381266408122552 2 -0.0949516296386718 11 Unmodified _LPNGKPVSV_ CTSC-RAB38|1|fusion;CTSC-RAB38|2|fusion;ENSG00000123892|ENST00000243662|RAB38 41.8396318013385 0.0653578398400075 4 {I|L}PN[KG][VP]SV 9 0 + 65.697 0.0 0.0 7.2231 7.2231 87.759 0.0 0.0 0.0 35.942798834023606 12.587418566968154 12.587418566968154 7.543096649567076 0 0.7742275032520141 1.6989700043360187 0.2614393726401688 0.4247425010840047 + + {I|L}PN[KG][VP]SV;{I|L}PW{I|L}[VP]SV;{I|L}PN[KG][{I|L}T][PA];{I|L}PW{I|L}[{I|L}T][PA] 7.2231;6.3938;5.0115;4.1821 +;-;-;- + 214 + 1 1.841 62564.4 1.0 2929 4400 7320 HBL1_DMSO_200M_050219_2,7331 HBL1_DMSO_200M_050219_2,7331,LPNGKPVSV True True LPNGKPVSV 39.589468 455.771777331829 7581400.0 7320.0 CTSC-RAB38|1|fusion;;ENSG00000123892|ENST00000243662|RAB38;;CTSC-RAB38|2|fusion 6.712004502614339 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7332 39.603 800.0 154020.0 25 0 7275.7 36314 SYLLHLKLR 9 147 381.5740579325415 0 381.5741149783134 PEAK CID FTMS 0 0 0 7320 182628.875 1.0 0 0.0 12 Unmodified _SYLLHLKLR_ ENST00000506591.1_1_5:145316511-145316655:+|nuORF 4.897010918128616 0.3444685223463734 4 PAM 3 9 10.991 0.0 0.0 1.444 0.0 0.0 98.79777469879237 360.18332849674067 458.981103195533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PAM 1.444 - 20 + 1 1.841 102893.2 0.6600000262260437 2930 4400 7320 HBL1_DMSO_200M_050219_2,7332 HBL1_DMSO_200M_050219_2,7332,SYLLHLKLR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7334 39.609 160.0 372440.0 25 0 38552.0 38148 TPPAPCLPSPI 11 92 546.7913457940977 1091.5681386549952 2 546.7919799685478 MULTI CID FTMS 0 0 0 7333 350797.8125 0.3160394038187582 -5 0.3621482849121094 1 Unmodified _TPPAPCLPSPI_ ENSG00000215182|ENST00000621226|MUC5AC 27.628801355627647 0.4434699450731472 4 TPMK 4 9 43.448 0.0 0.0 3.9804 0.0 0.0 0.0 631.3111666315061 631.3111666315061 -3.424778212679485 0.0 -3.424778212679485 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 TPMK 3.9804 - 169 + 1 1.841 51171.1 1.0 2931 4401 7333 HBL1_DMSO_200M_050219_2,7334 HBL1_DMSO_200M_050219_2,7334,TPPAPCLPSPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7335 39.623 800.0 182000.0 25 0 16056.0 + 21450 LPHHRVIEV 9 168 367.2176346342724 1098.631074503017 3 367.2167846560478 MULTI CID FTMS 0 0 0 7333 68278.6953125 0.4125900473703198 1 -0.0483131408691406 2 Unmodified _LPHHRVIEV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 15.248480904072842 0.4239247793462406 4 {I|L}PHH{I|L}[RV]EV 9 2 + 35.766 0.0 0.0 3.2555 3.2555 73.119 0.0 0.0 0.0 21.78692060176596 2.938195733382571 2.938195733382571 7.403626894942441 0 0.2887254899964357 0.8538719643217619 0.5269763493273799 0.0 {I|L}PHH{I|L}[RV]EV;{I|L}PHH{I|L}[RV]D{I|L};{I|L}HHP{I|L}[RV]EV;{I|L}E{I|L}E{I|L}[RV]EV;{I|L}HHP{I|L}[RV]D{I|L};{I|L}[{I|L}T]H[WK]K{[CA]|SS};{I|L}E{I|L}E{I|L}[RV]D{I|L} 3.2555;2.5816;1.0528;0.73062;0.37887;0.17548;0.056726 -;-;-;-;-;-;- 156 + 1 1.841 118761.0 0.5600000023841858 2932 4401 7333 HBL1_DMSO_200M_050219_2,7335 HBL1_DMSO_200M_050219_2,7335,LPHHRVIEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7336 39.624 66.0 1197400.0 25 0 78300.0 + 22229 LPRELSKQV 9 95 535.3209181080251 1068.6272832828502 2 535.3219482302666 MULTI CID FTMS 0 0 0 7333 962414.5625 0.1729010398158624 -13 0.6577682495117188 3 Unmodified _LPRELSKQV_ ENSG00000123975|ENST00000314355|CKS2 36.506200033944 0.094635877243972 4 {I|L}SKQV 5 4 51.333 0.0 0.0 4.8037 0.0 0.0 495.28132826972814 0.0 495.28132826972814 0.0 37.62194771494772 0.0 0.0 0 0.9857737871658818 0.0 0.7742275032520141 0.0 + {I|L}SKQV 4.8037 + + 204 1 1.841 63885.2 1.0 2933 4401 7333 HBL1_DMSO_200M_050219_2,7336 HBL1_DMSO_200M_050219_2,7336,LPRELSKQV True True LPRELSKQV 39.624209 535.321948230267 42713728.0 7333.0 chr9:89311345-89315170|10|74.8|0.14|9.01|+|1|None,CKS2|1;;ENSG00000123975|ENST00000314355|CKS2 1.6102000772953031 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7337 39.627 135.0 862020.0 25 0 61550.0 + 41298 VPHTRPVSL 9 119 503.2960277940775 1004.577502654955 2 503.2958251833916 MULTI CID FTMS 0 0 0 7333 483904.0 0.0367743024909501 -13 0.6577682495117188 4 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 60.07390631473393 0.0260411565414776 4 VPHTR[VP]S{I|L} 9 0 + 80.411 0.0 0.0 8.0045 8.0045 96.768 0.0 0.0 0.0 55.4972646727866 5.220384319171387 5.220384319171387 39.291746928241125 0 1.1989700043360187 1.6989700043360187 1.3807196863200843 0.0 + + VPHTR[VP]S{I|L};VP{I|L}[W{I|L}][HQ]{I|L};VP[YK][RV]M{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}]SS{I|L}PV;[HT][RP]VS{I|L}PV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{[VA]|[{I|L}G]}[KA]{[{M(Oxidation (M))|F}H]|[RQ]} 8.0045;4.0932;3.1853;3.1192;1.57;0.71933 +;-;-;-;-;- + 311 + 1 1.841 91731.4 1.0 2934 4401 7333 HBL1_DMSO_200M_050219_2,7337 HBL1_DMSO_200M_050219_2,7337,VPHTRPVSL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7338 39.63 182.0 386200.0 25 0 51320.0 + 37022 TFQSTKAVY 9 109 522.7711694757231 1043.5277860182462 2 522.7714111208916 MULTI CID FTMS 0 0 0 7333 250422.859375 0.4557700079886695 -6 0.4281120300292969 5 Unmodified _TFQSTKAVY_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7687207-7690948:-|nuORF 51.629811660486645 0.0367964933207742 4 [KT]SAGAVYT{M(Oxidation (M))|F} 10 6 + 42.283 0.0 0.0 4.052 4.052 73.152 0.0 0.0 0.0 8.177915127358126 11.297443431192214 8.177915127358126 5.2557626122369 0 0.1331596456423734 0.0 1.079689690656103 1.274227503252014 [KT]SAGAVYT{M(Oxidation (M))|F};[KT]SAQVYT{M(Oxidation (M))|F};[KT]SAVQYT{M(Oxidation (M))|F};[KT]SQAVYT{M(Oxidation (M))|F};[KT]SAGAT{M(Oxidation (M))|F}VY;[KT]SAV[AG]YT{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]QST[KA]VY;[{M(Oxidation (M))|F}T][TP]VA{M(Oxidation (M))|F}VY;{[VA]|[{I|L}G]}QAQVAQET;{[SA]|[TG]}[KT]GAVYT{M(Oxidation (M))|F} 4.052;3.5483;3.4762;3.0612;2.8407;2.5938;2.54;2.4882;2.4056;2.3952 -;-;-;-;-;-;+;-;-;- + 611 1 1.841 61502.2 1.0 2935 4401 7333 HBL1_DMSO_200M_050219_2,7338 HBL1_DMSO_200M_050219_2,7338,TFQSTKAVY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7339 39.636 272.0 274090.0 25 0 65107.0 + 45934 YYYDKNIIHK 10 93 452.9028190100347 1355.6866276303042 3 452.9028503298759 MULTI CID FTMS 0 0 0 7333 229729.984375 0.9719065836014286 -1 0.0466384887695312 6 Unmodified _YYYDKNIIHK_ ENSG00000134954|ENST00000392668|ETS1;ENSG00000157557|ENST00000360938|ETS2;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-4|ETS1;nc|ENSG00000134954|P14921|ETS1 42.83518252547288 0.1276281763412153 4 YYYDK{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}HK 10 0 + 80.641 0.0 0.0 5.9484 5.9484 78.266 0.0 0.0 0.0 36.53212513775344 3.411742928826272 3.411742928826272 3.411742928826272 0 0.3807196863200844 2.0 0.3494850021680094 0.5994850021680094 + + YYYDK{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}HK;YYYDK{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KH 5.9484;5.6967 +;- + 124 + 1 1.841 64961.0 1.0 2936 4401 7333 HBL1_DMSO_200M_050219_2,7339 HBL1_DMSO_200M_050219_2,7339,YYYDKNIIHK True True YYYDKNIIHK 39.635507 452.902850329876 1722187.75 7333.0 nc|ENSG00000134954|P14921-4|ETS1;;nc|ENSG00000134954|P14921-2|ETS1;;ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;ENSG00000157557|ENST00000360938|ETS2 7.402654488881429 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7340 39.643 397.0 296320.0 25 0 34852.0 + 45851 YYQDTPKQI 9 139 578.287769165863 1154.560985398526 2 578.2878906130791 MULTI CID FTMS 0 0 0 7333 190950.15625 0.0346564146892985 -13 0.6577682495117188 7 Unmodified _YYQDTPKQI_ ENSG00000048162|ENST00000614830|NOP16 92.65332237495696 0.0139087009896299 4 YYQDTPKQ{I|L} 9 0 + 88.146 0.0 0.0 7.6346 7.6346 91.107 0.0 0.0 0.0 60.88475352260661 12.645680359949552 12.645680359949552 9.208187539523747 0 1.079689690656103 2.0 0.6549471895720984 1.424742501084005 + + YYQDTPKQ{I|L};YY[AG]DTPKQ{I|L};YYQDTPK[AG]{I|L};YY[AG]DTPK[AG]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}Y[KQ]{I|L}{[ET]|[MV]}M 7.6346;6.8371;6.5553;5.7616;0.42398 +;-;-;-;- + 616 + 1 1.841 90560.5 1.0 2937 4401 7333 HBL1_DMSO_200M_050219_2,7340 HBL1_DMSO_200M_050219_2,7340,YYQDTPKQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7341 39.652 511.0 315950.0 25 0 15477.0 + 43148 VYPPSAAKM 9 137 482.2526347707442 962.4907166082884 2 482.2516662478447 MULTI CID FTMS 0 0 0 7333 147131.59375 0.6339432586966371 4 -0.1444168090820312 8 Unmodified _VYPPSAAKM_ ENSG00000150907|ENST00000379561|FOXO1 18.1463463914782 0.3454829746528889 4 [YV]PP 4 5 34.798 0.0 0.0 3.6154 0.0 0.0 0.0 503.23252283267817 503.23252283267817 21.30327099861356 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + [YV]PP 3.6154 + + 304 + 1 1.841 124536.8 1.0 2938 4401 7333 HBL1_DMSO_200M_050219_2,7341 HBL1_DMSO_200M_050219_2,7341,VYPPSAAKM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7343 39.656 38.0 2042600.0 25 0 253430.0 + 19121 LDVRLNQLV 9 88 357.2173139370643 1068.630112411393 3 357.2167541384697 MULTI CID FTMS 0 0 0 7342 1729342.875 0.3232481842624112 -13 0.6395721435546875 1 Unmodified _LDVRLNQLV_ REV__ENST00000470145.2_1_20:31016136-31017171:+|nuORF 24.020572477871973 0.2255576514309169 4 QKS{I|L}HVQ 7 -1 45.168 0.0 0.0 4.2267 0.0 0.0 230.1645885302345 0.0 230.1645885302345 0.0 25.70390476194192 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.5891368308784531 QKS{I|L}HVQ 4.2267 - 200 + 1 1.841 69912.2 1.0 2939 4402 7342 HBL1_DMSO_200M_050219_2,7343 HBL1_DMSO_200M_050219_2,7343,LDVRLNQLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7344 39.658 105.0 374200.0 25 0 29436.0 38080 TPIPYRNQ 8 64 494.7644134747128 987.5142740162256 2 494.7646057009697 MULTI CID FTMS 0 0 0 7342 308236.84375 0.0983633785249777 5 -0.1532058715820312 2 Unmodified _TPIPYRNQ_ ENSG00000180336|ENST00000409122|MEIOC;nc|ENSG00000180336|A2RUB1-1|MEIOC;nc|ENSG00000180336|A2RUB1-2|MEIOC;nc|ENSG00000180336|A2RUB1-5|MEIOC 16.942295170755138 0.6606234159769251 4 TPY 3 5 50.445 0.0 0.0 5.1083 0.0 0.0 0.0 623.3275145271379 623.3275145271379 26.888793896675267 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 TPY 5.1083 - 24 + 1 1.841 35886.4 1.0 2940 4402 7342 HBL1_DMSO_200M_050219_2,7344 HBL1_DMSO_200M_050219_2,7344,TPIPYRNQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7345 39.662 194.0 309810.0 25 0 43576.0 + 45957 YYYGFSSGY 9 106 553.7245630101261 1105.434573087052 2 553.7255737185478 MULTI CID FTMS 0 0 0 7342 349120.4375 0.1553907842769399 15 -0.6148567199707031 3 Unmodified _YYYGFSSGY_ REV__ENSG00000212938|ENST00000391624|KRTAP6-3 13.50788311687929 0.4710407108020397 4 YYGS 4 -1 40.49 0.0 0.0 3.6628 0.0 0.0 0.0 632.2354208255864 632.2354208255864 25.00508444608478 0.0 0.0 0.0 0 0.5 2.0 0.3807196863200844 0.0 YYGS 3.6628 - 236 1 1.841 50761.8 1.0 2941 4402 7342 HBL1_DMSO_200M_050219_2,7345 HBL1_DMSO_200M_050219_2,7345,YYYGFSSGY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7346 39.672 535.0 249730.0 25 0 19934.0 + 4877 DGFKDEATV 9 151 491.2299418944989 980.4453308557978 2 491.2303954958916 MULTI CID FTMS 0 0 0 7342 187183.796875 0.0968582992937321 -9 0.5637054443359375 4 Unmodified _DGFKDEATV_ ENSG00000070915|ENST00000563236|SLC12A3;nc|ENSG00000070915|P55017-2|SLC12A3;nc|ENSG00000070915|P55017-3|SLC12A3 26.268140514670165 0.1969607489560049 4 {[TV]|[{I|L}S]}A[C(Carbamidomethyl (C))M]EATV 9 5 {[TV]|[{I|L}S]}A[C(Carbamidomethyl (C))M]EA + + 25.093 8.191 1.0745 2.5594 2.5594 45.171 0.0 0.0 0.0 0.0 10.059363894716258 0.0 0.0 0 0.4247425010840047 0.0 0.2887254899964357 0.0 {[TV]|[{I|L}S]}A[C(Carbamidomethyl (C))M]EATV 2.5594 - 841 + 1 1.841 105671.2 1.0 2942 4402 7342 HBL1_DMSO_200M_050219_2,7346 HBL1_DMSO_200M_050219_2,7346,DGFKDEATV False True DGFKDEATV 39.671528 491.230395495892 22761708.0 7342.0 nc|ENSG00000070915|P55017-3|SLC12A3;;ENSG00000070915|ENST00000563236|SLC12A3;;nc|ENSG00000070915|P55017-2|SLC12A3 5.687896887461345 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7348 39.689 800.0 101250.0 25 0 7155.5 3445 CDMSHWLNVK 10 104 616.7788208008598 1231.5430886685194 2 616.7775756716728 MULTI CID FTMS 0 0 0 7347 80439.8828125 0.1733840032062292 -10 0.5836372375488281 1 Unmodified _CDMSHWLNVK_ ENSG00000135220|ENST00000251566|UGT2A3 13.042465956692816 0.6287021003332052 4 D[WR]{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}NP{I|L} 10 9 + 22.633 0.0 0.0 1.8378 1.8378 75.763 0.0 0.0 0.0 5.088836101636325 0.3479174014204318 0.3479174014204318 12.971736348700096 0 0.0 0.0 0.3807196863200844 0.0 D[WR]{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}NP{I|L};[MT][QP]{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}NP{I|L} 1.8378;0.7845 -;- 202 + 1 1.839 66400.3 0.5600000023841858 2943 4403 7347 HBL1_DMSO_200M_050219_2,7348 HBL1_DMSO_200M_050219_2,7348,CDMSHWLNVK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7349 39.693 181.0 411110.0 25 0 36884.0 + 2466 AQYDGAYKV 9 86 507.7483902487239 1013.4822275642478 2 507.7481262087822 MULTI CID FTMS 0 0 0 7347 306280.1875 0.4048165279714694 -4 0.1715469360351562 2 Unmodified _AQYDGAYKV_ ENSG00000168291|ENST00000302746|PDHB;ENST00000469827.1_1_3:58417358-58419536:-|nuORF;ENST00000480626.5_1_3:58417333-58419536:-|nuORF;ENST00000482894.5_1_3:58417133-58419536:-|nuORF;nc|ENSG00000168291|P11177-2|PDHB;nc|ENSG00000168291|P11177-3|PDHB 29.081581746732265 0.1611639662936252 4 YYDQK{[QV]|[N{I|L}]|[RA]|[KV]}A 8 6 + 32.062 0.0 0.0 3.1635 3.1635 75.97 0.0 0.0 0.0 0.2287874528033668 7.3688000063343395 0.2287874528033668 9.262137858390808 0 0.0 2.0 0.0 0.0 YYDQK{[QV]|[N{I|L}]|[RA]|[KV]}A;YYD[AG]K{[QV]|[N{I|L}]|[RA]|[KV]}A;{[QD]|[EN]|[WG]|[KD]|[RS]}YYK{[QV]|[N{I|L}]|[RA]|[KV]}A;{[DA]|[EG]}GYYK{[QV]|[N{I|L}]|[RA]|[KV]}A;YY{[QS]|[NT]}[{I|L}V]{[QN]|[E{I|L}]|[KN]} 3.1635;2.2496;1.9579;1.4662;1.1726 -;-;-;-;- 209 1 1.839 64734.6 1.0 2944 4403 7347 HBL1_DMSO_200M_050219_2,7349 HBL1_DMSO_200M_050219_2,7349,AQYDGAYKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7350 39.706 800.0 251540.0 25 0 19315.0 + 22093 LPPPVAVRK 9 171 488.8188640373592 975.6231751415183 2 488.8188964724541 MULTI CID FTMS 0 0 0 7347 126663.6796875 0.3842244359043072 8 -0.2197151184082031 3 Unmodified _LPPPVAVRK_ ENSG00000184271|ENST00000333640|POU6F1;nc|ENSG00000184271|Q14863|POU6F1 21.74664581756881 0.2544899275067181 4 {I|L}PPP 4 5 52.691 0.0 0.0 5.4007 0.0 0.0 0.0 568.3600557916624 568.3600557916624 30.920561918473908 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPP 5.4007 + + 627 + 1 1.839 154355.2 0.5899999737739563 2945 4403 7347 HBL1_DMSO_200M_050219_2,7350 HBL1_DMSO_200M_050219_2,7350,LPPPVAVRK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7351 39.718 665.0 204420.0 25 0 15384.0 + 2001 APAPPSKVI 9 140 440.2685915844583 878.5226302357165 2 440.2682678103447 MULTI CID FTMS 0 0 0 7347 110453.6328125 0.272398162513484 -9 0.545318603515625 4 Unmodified _APAPPSKVI_ ENSG00000062650|ENST00000298767|WAPL;nc|ENSG00000062650|Q7Z5K2-2|WAPL;nc|ENSG00000062650|Q7Z5K2-3|WAPL 41.8396318013385 0.0653578398400075 4 APAP[PS]KV{I|L} 9 0 + 68.126 0.0 0.0 7.7547 7.7547 86.213 0.0 0.0 0.0 23.46832715811012 4.771212547196626 4.771212547196626 4.771212547196626 0 1.305462187404089 1.5228787452803376 0.0 0.0 + + APAP[PS]KV{I|L};APAP[PS]K{I|L}V 7.7547;7.2116 +;- + 367 + 1 1.839 104933.3 1.0 2946 4403 7347 HBL1_DMSO_200M_050219_2,7351 HBL1_DMSO_200M_050219_2,7351,APAPPSKVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7352 39.73 698.0 155840.0 25 0 9471.9 + 21874 LPPESTQV 8 143 435.7319671401997 869.4493813471995 2 435.7321044802666 MULTI CID FTMS 0 0 0 7347 84925.453125 0.2614235347455477 -53 2.564765930175781 5 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 34.18733598223924 0.3315367612694167 4 [EP]P{I|L}STQV 8 2 + 20.67 0.0 0.0 2.3774 2.3774 66.863 0.0 0.0 0.0 3.487219860018559 6.791746928241125 3.487219860018559 3.487219860018559 0 0.218765315847925 0.8538719643217619 0.7302046884880937 0.0 [EP]P{I|L}STQV;[{I|L}P][EP]STQV;[EP]PS{I|L}TQV;[TP]DP{I|L}TQV;{[HG]|PP}E{I|L}STQV;[EP]SP{I|L}TQV;{[HG]|PP}ES{I|L}TQV;[PS]EP{I|L}TQV;[EP]PS[QT]{I|L}V 2.3774;1.9763;1.9401;1.4936;1.3183;1.2476;0.88097;0.73727;0.0066591 -;+;-;-;-;-;-;-;- + 328 1 1.839 88577.1 1.0 2947 4403 7347 HBL1_DMSO_200M_050219_2,7352 HBL1_DMSO_200M_050219_2,7352,LPPESTQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7354 39.735 47.0 844840.0 25 0 168430.0 -1 YQAMACYDQN 10 70 611.7287821984341 1221.4430114636682 2 611.7292358279228 MULTI CID FTMS 0 0 0 7353 1080956.0 0.7385134829886042 3 -0.0748481750488281 1 Oxidation (M) _YQAM(Oxidation (M))ACYDQN_ ENSG00000005108|ENST00000423059|THSD7A 6.2057823575117 0.6979311171683138 4 N 1 -1 14.604 0.0 0.0 1.1956 0.0 0.0 1089.3891764800728 0.0 1089.3891764800728 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 N 1.1956 + + 57 + 1 1.839 35918.0 1.0 2948 4404 7353 HBL1_DMSO_200M_050219_2,7354 HBL1_DMSO_200M_050219_2,7354,YQAMACYDQN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7355 39.736 41.0 1598100.0 25 0 241440.0 + 21319 LPESSRGLV 9 75 479.2720558895423 956.5295588458846 2 479.2719604372978 MULTI CID FTMS 0 0 0 7353 1323942.5 0.6717058632600635 -5 0.2299728393554687 2 Unmodified _LPESSRGLV_ ENST00000590866.2_1_19:1358969-1359134:+|nuORF 32.78568957990786 0.1150597335874693 4 {I|L}PESS 5 4 67.479 0.0 0.0 7.0546 0.0 0.0 0.0 440.2635897272094 440.2635897272094 41.53720958383822 0.0 0.0 0.0 0 0.7302046884880937 1.5228787452803376 0.8494850021680094 0.0 + {I|L}PESS 7.0546 + + 65 + 1 1.839 55857.0 1.0 2949 4404 7353 HBL1_DMSO_200M_050219_2,7355 HBL1_DMSO_200M_050219_2,7355,LPESSRGLV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7356 39.738 120.0 403020.0 25 0 43314.0 + -1 TDTNMENCPT 10 89 591.7255534261418 1181.4365539190835 2 591.7261230349541 MULTI CID FTMS 0 0 0 7353 547964.8125 0.7809352799300106 2 -0.06805419921875 3 Carbamidomethyl (C) _TDTNMENC(Carbamidomethyl (C))PT_ REV__ENSG00000215440|ENST00000356091|NPEPL1;REV__ENST00000527587.5_1_20:57268807-57288710:+|nuORF;REV__ENST00000529976.5_1_20:57268807-57287813:+|nuORF;REV__ENST00000530122.1_1_20:57266543-57280604:+|nuORF;REV__nc|ENSG00000215440|Q8NDH3-2|NPEPL1;REV__nc|ENSG00000215440|Q8NDH3-3|NPEPL1;REV__nc|ENSG00000215440|Q8NDH3-4|NPEPL1;REV__nc|ENSG00000215440|Q8NDH3-5|NPEPL1 6.2057823575117 0.6979311171683138 4 SEST 4 -1 16.186 0.0 0.0 1.37 0.0 0.0 374.1926707177148 400.0645529304144 774.2572236481292 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 SEST 1.37 - 68 + 1 1.839 43425.7 1.0 2950 4404 7353 HBL1_DMSO_200M_050219_2,7356 HBL1_DMSO_200M_050219_2,7356,TDTNMENCPT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7357 39.74 59.0 855730.0 25 0 106220.0 -1 RFQSSAVM 8 90 471.22998375137854 940.4454145695572 2 471.2292053103447 MULTI CID FTMS 0 0 0 7353 508402.3125 0.6168834679941209 -7 0.3697929382324219 4 Oxidation (M) _RFQSSAVM(Oxidation (M))_ ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7 14.838274106304384 0.6917062315640577 4 AV{M(Oxidation (M))|F} 3 -1 30.802 0.0 0.0 3.2753 0.0 0.0 605.29301650215 0.0 605.29301650215 0.0 19.54292148767681 0.0 0.0 0 1.0 0.0 0.0 0.0 AV{M(Oxidation (M))|F} 3.2753 + + 148 1 1.839 45041.9 1.0 2951 4404 7353 HBL1_DMSO_200M_050219_2,7357 HBL1_DMSO_200M_050219_2,7357,RFQSSAVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7358 39.748 455.0 205680.0 25 0 14936.0 + 35533 STPASSISTQP 11 113 538.2682969640118 1074.5220409948236 2 538.2689086794853 MULTI CID FTMS 0 0 0 7353 176009.0625 0.5988310000292383 -5 0.2299728393554687 5 Unmodified _STPASSISTQP_ REV__ENSG00000215182|ENST00000621226|MUC5AC;REV__ENSG00000215182|ENST00000621226|MUC5AC 9.38312468134398 0.8308777417566128 4 ST[PA]P{I|L}H[RV] 9 -1 31.717 0.0 0.0 2.9517 0.0 0.0 97.97451102883186 0.0 97.97451102883186 0.0 19.93439454629025 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3807196863200844 ST[PA]P{I|L}H[RV] 2.9517 - 109 + 1 1.839 78167.9 1.0 2952 4404 7353 HBL1_DMSO_200M_050219_2,7358 HBL1_DMSO_200M_050219_2,7358,STPASSISTQP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7360 39.764 800.0 171340.0 25 0 15737.0 + -1 VSCSFSDFGC 10 173 583.2181573103188 1164.4217616874375 2 583.2174560427666 MULTI CID FTMS 0 0 0 7359 177963.203125 0.3609242369478408 6 -0.1435432434082031 1 2 Carbamidomethyl (C) _VSC(Carbamidomethyl (C))SFSDFGC(Carbamidomethyl (C))_ REV__ENST00000540753.5_1_9:125155274-125155376:+|nuORF 10.073929032068715 0.6785112666868882 4 [YQ]{I|L}DQY 6 -1 28.364 0.0 0.0 2.4359 0.0 0.0 0.0 351.0394124044876 351.0394124044876 11.681212380090216 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.7742275032520141 [YQ]{I|L}DQY 2.4359 - 847 1 1.839 103733.2 0.6000000238418579 2953 4405 7359 HBL1_DMSO_200M_050219_2,7360 HBL1_DMSO_200M_050219_2,7360,VSCSFSDFGC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7361 39.77 366.0 284760.0 25 0 46525.0 18904 LAVSDLLV 8 112 415.25373306436177 0 415.2534362673759 PEAK CID FTMS 0 0 0 7359 177139.078125 0.1767672923174333 5 -0.1380424499511718 2 Unmodified _LAVSDLLV_ ENSG00000132911|ENST00000255262|NMUR2;ENSG00000148734|ENST00000277942|NPFFR1;ENSG00000171596|ENST00000305141|NMUR1;ENSG00000184845|ENST00000393752|DRD1 5.760428011301431 0.5786759180849727 4 AA 2 7 13.315 0.0 0.0 1.6072 0.0 0.0 114.07843673243606 569.3277681940061 683.4062049264422 0.0 0.0 0.0 0.0 0 0.4731975075880329 0.0 0.0 0.0 AA 1.6072 - 20 + 1 1.839 85352.2 1.0 2954 4405 7359 HBL1_DMSO_200M_050219_2,7361 HBL1_DMSO_200M_050219_2,7361,LAVSDLLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7362 39.784 800.0 148660.0 25 0 9356.7 + 13057 HAYLSKNSL 9 154 516.7773405573759 1031.5401281815516 2 516.7770873904228 MULTI CID FTMS 0 0 0 7359 95429.4140625 0.4026686044043072 -4 0.1444168090820312 3 Unmodified _HAYLSKNSL_ ENSG00000131236|ENST00000372805|CAP1;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;ENST00000476047.1_1_3:76483919-76484456:+|nuORF;ENST00000494114.1_1_1:40536414-40537202:+|nuORF;nc|ENSG00000131236|Q01518-2|CAP1 76.82478488871298 0.0184607444814265 4 [HA]Y{I|L}SKNS{I|L} 9 0 + 70.403 0.0 0.0 6.825 6.825 89.98 0.0 0.0 0.0 1.1816571734373724 1.1816571734373724 1.1816571734373724 9.822474587548072 0 2.271652514092061 1.6989700043360187 0.2614393726401688 0.0 + + [HA]Y{I|L}SKNS{I|L};[HA]Y{I|L}SKNTV;[HA]Y{I|L}SKGGS{I|L};[HA]Y{I|L}SKGGTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{I|L}SKNS{I|L};[HA]Y{I|L}S{I|L}{I|L}C{I|L};{[QG]|[NA]}W{I|L}SKNS{I|L};[NS]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KNS{I|L};[HA]Y{I|L}[{I|L}A][MT]{I|L};{[QG]|[NA]}{I|L}WSKNS{I|L} 6.825;5.8728;5.8178;4.9801;4.846;3.8618;3.5822;3.2639;3.0914;2.7809 +;-;-;-;-;-;-;-;-;- + 543 1 1.839 91862.2 0.550000011920929 2955 4405 7359 HBL1_DMSO_200M_050219_2,7362 HBL1_DMSO_200M_050219_2,7362,HAYLSKNSL True True HAYLSKNSL 39.784283 516.777087390423 1390007.125 7359.0 ENSG00000131236|ENST00000372805|CAP1;;ENST00000476047.1_1_3:76483919-76484456:+|nuORF;;ENST00000417455.1_1_10:44100293-44100833:-|nuORF;;nc|ENSG00000131236|Q01518-2|CAP1;;ENST00000461993.1_1_1:40535258-40537202:+|nuORF;;ENST00000494114.1_1_1:40536414-40537202:+|nuORF 5.984730879465739 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7363 39.798 800.0 42934.0 25 0 9257.0 -1 0 32 1163.1373857597955 3486.3903278795874 3 1164.140063464642 MULTI CID FTMS 0 0 0 7359 65725.1015625 0.6718278964347849 -4 0.1444168090820312 4 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20049 0.0 0.0 1999.6845004549564 1336.6219369395076 3336.306437394464 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20049 - 2 + 1 1.839 38736.2 0.3199999928474426 2956 4405 7359 HBL1_DMSO_200M_050219_2,7363 HBL1_DMSO_200M_050219_2,7363, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7365 39.803 24.0 1466900.0 25 0 114150.0 + 43095 DAVYGQKEI 9 68 512.2407265148009 1022.466900096402 2 512.2408935427666 MULTI CID FTMS 0 0 0 7364 1643972.875 0.140491962000912 7 -0.1262855529785156 1 Unmodified _VYNASNNEL_ ENSG00000145907|ENST00000356245|G3BP1;nc|ENSG00000145907|Q13283-2|G3BP1;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;ENST00000519832.1_1_5:151166169-151170647:+|nuORF 12.531546534597751 0.4974689918368763 4 [YV]NA 4 5 30.177 0.0 0.0 2.9514 0.0 0.0 0.0 572.2319507157956 572.2319507157956 12.016675202793715 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [YV]NA 2.9514 + + 71 1 1.839 33372.3 1.0 2957 4406 7364 HBL1_DMSO_200M_050219_2,7365 HBL1_DMSO_200M_050219_2,7365,VYNASNNEL False True DAVYGQKEI 39.802587 512.240893542767 7530788.5 7364.0 ENSG00000145907|ENST00000356245|G3BP1;;nc|ENSG00000145907|Q13283-2|G3BP1;;ENST00000413279.1_1_2:136269117-136269381:-|nuORF;;ENST00000519832.1_1_5:151166169-151170647:+|nuORF 5.483479658762614 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7366 39.804 20.0 2238300.0 25 0 262320.0 + -1 TRGGTCSCKT 10 65 564.2511946703271 1126.487836407454 2 564.2518798708916 MULTI CID FTMS 0 0 0 7364 2615629.25 0.9246301087884656 -1 0.0503082275390625 2 2 Carbamidomethyl (C) _TRGGTC(Carbamidomethyl (C))SC(Carbamidomethyl (C))KT_ REV__ENSG00000164619|ENST00000649409|BMPER 5.731851221503515 0.7001233259664787 4 SSVTS 5 -1 39.196 0.0 0.0 3.4795 0.0 0.0 320.1544783389235 342.09601770572505 662.2504960446486 0.0 0.0 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 SSVTS 3.4795 - 68 + 1 1.839 41471.4 1.0 2958 4406 7364 HBL1_DMSO_200M_050219_2,7366 HBL1_DMSO_200M_050219_2,7366,TRGGTCSCKT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7367 39.805 23.0 2497500.0 25 0 457000.0 + 41744 VPTDPPRTI 9 59 498.2802641779709 994.5459754227418 2 498.2797729372978 MULTI CID FTMS 0 0 0 7364 2103156.0 0.2824634438093555 -9 0.4378471374511719 3 Unmodified _VPTDPPRTI_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 31.26834338654808 0.1333407332142048 4 VPTDP 5 4 58.928 0.0 0.0 5.9251 0.0 0.0 0.0 482.27411829166255 482.27411829166255 31.826382099970083 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 + VPTDP 5.9251 + + 115 + 1 1.839 51201.1 1.0 2959 4406 7364 HBL1_DMSO_200M_050219_2,7367 HBL1_DMSO_200M_050219_2,7367,VPTDPPRTI False True VPTDPPRTI 39.804943 498.279772937298 408557600.0 7364.0 ENSG00000132004|ENST00000393261|FBXW9;;nc|ENSG00000132004|Q5XUX1-2|FBXW9 5.772884686787923 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7369 39.818 627.0 489000.0 25 0 29197.0 + 41726 VPSTTLGTV 9 175 437.7477001688821 873.4808474045642 2 437.7481567263603 MULTI CID FTMS 0 0 0 7368 106821.328125 0.3290773579794279 -7 0.2481575012207031 1 Unmodified _VPSTTLGTV_ REV__ENST00000555225.5_1_14:24910114-24911620:-|nuORF;REV__ENST00000556523.1_1_14:24910114-24911620:-|nuORF 57.47134341890925 0.0274820932774257 4 VPSVGTVH 8 -1 73.952 0.0 0.0 8.4663 0.0 0.0 0.0 94.03047357730702 94.03047357730702 54.14442544444192 0.0 0.0 0.0 0 1.329689690656103 2.0 1.1549471895720984 0.0 VPSVGTVH 8.4663 - 1694 + 1 1.839 240206.1 1.0 2960 4407 7368 HBL1_DMSO_200M_050219_2,7369 HBL1_DMSO_200M_050219_2,7369,VPSTTLGTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7370 39.82 76.0 1318200.0 25 0 153470.0 22098 LPPPVAVRK 9 82 326.2152667066333 975.6239707201 3 326.2147704958916 MULTI CID FTMS 0 0 0 7368 664490.5625 0.4734313179086578 14 -0.7216987609863281 2 Unmodified _LPPPVAVRK_ ENSG00000184271|ENST00000333640|POU6F1;nc|ENSG00000184271|Q14863|POU6F1 15.847184025352805 0.4077185912009129 4 {I|L}PPP 4 5 49.909 0.0 0.0 5.1156 0.0 0.0 0.0 568.3585108130505 568.3585108130505 33.94016261540408 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 0.0 0.0 + {I|L}PPP 5.1156 + + 39 + 1 1.839 86494.3 1.0 2961 4407 7368 HBL1_DMSO_200M_050219_2,7370 HBL1_DMSO_200M_050219_2,7370,LPPPVAVRK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7371 39.828 434.0 232990.0 25 0 26244.0 -1 IMDWMDEM 8 140 543.6984299720161 1085.3823070108322 2 543.6982299685478 MULTI CID FTMS 0 0 0 7368 109117.0859375 0.530557552803574 -6 0.2015190124511718 3 Oxidation (M) _IM(Oxidation (M))DWMDEM_ ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1 10.183394434864962 0.7604730176254005 4 [VS][PA][KT]QY 8 -1 25.367 0.0 0.0 2.3371 0.0 0.0 0.0 207.8938762421124 207.8938762421124 -0.7080048751170942 0.0 -0.7080048751170942 0.0 0 0.0 2.0 0.3494850021680094 0.4247425010840047 [VS][PA][KT]QY 2.3371 - 365 1 1.839 82677.7 1.0 2962 4407 7368 HBL1_DMSO_200M_050219_2,7371 HBL1_DMSO_200M_050219_2,7371,IMDWMDEM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7372 39.841 800.0 110710.0 25 0 7646.4 8834 EYSNLCEPEQF 11 111 679.7842001940065 1357.553847454813 2 679.7859374880791 MULTI CID FTMS 0 0 0 7368 89573.0625 0.5397589335952594 -5 0.1532058715820312 4 Unmodified _EYSNLCEPEQF_ ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-7|DIAPH3 7.101721422024254 0.8416415510090076 4 DEAQQNA{M(Oxidation (M))|F} 8 10 64.774 0.0 0.0 4.7714 0.0 0.0 436.1710377423844 0.0 436.1710377423844 0.0 33.00357438670538 0.0 0.0 0 0.7302046884880937 0.0 0.6861818737241735 0.0 DEAQQNA{M(Oxidation (M))|F} 4.7714 - 670 1 1.839 70631.8 0.5400000214576721 2963 4407 7368 HBL1_DMSO_200M_050219_2,7372 HBL1_DMSO_200M_050219_2,7372,EYSNLCEPEQF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7374 39.846 3.4 12010000.0 25 0 2012600.0 + 30698 RFQSSAVM 8 54 463.23147654016384 924.4484001471276 2 463.2319213747978 MULTI CID FTMS 0 0 0 7373 18388240.0 0.9023927818941972 -3 0.0934677124023437 1 Unmodified _RFQSSAVM_ ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7 20.453626601364224 0.6087503291685402 4 VM 2 6 30.217 0.0 0.0 3.2686 0.0 0.0 676.3277927025949 0.0 676.3277927025949 0.0 22.76925019195368 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + VM 3.2686 + + 11 + 1 1.839 39646.2 1.0 2964 4408 7373 HBL1_DMSO_200M_050219_2,7374 HBL1_DMSO_200M_050219_2,7374,RFQSSAVM False True RFQSSAVM 39.845747 463.231921374798 391264056.0 7373.0 ENSG00000275379|ENST00000616365|H3C11;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000168148|ENST00000366696|H3-4;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13 5.036830107371013 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7375 39.847 3.7 18791000.0 25 0 1941000.0 + 41295 VPHTRPVSL 9 83 335.8664553650867 1004.57753669546 3 335.8662292361259 MULTI CID FTMS 0 0 0 7373 15482720.0 0.5373475630918462 -6 0.1895713806152343 2 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 49.55428908609986 0.0413471690215031 4 [VP]H{[SA]|[TG]}VSPV 9 4 47.277 0.0 0.0 4.7061 0.0 0.0 0.0 128.0698232706126 128.0698232706126 15.550077918659682 0.0 0.0 0.0 0 1.174742501084005 1.5228787452803376 0.8494850021680094 0.0 [VP]H{[SA]|[TG]}VSPV 4.7061 - 506 1 1.839 61470.6 1.0 2965 4408 7373 HBL1_DMSO_200M_050219_2,7375 HBL1_DMSO_200M_050219_2,7375,VPHTRPVSL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7376 39.848 36.0 1244300.0 25 0 96419.0 + 27997 PMGPPPVSTPL 11 83 364.86354859986193 1091.568816399786 3 364.8634216189384 MULTI CID FTMS 0 0 0 7373 1377963.0 0.9472152207412708 -1 0.0363655090332031 3 Unmodified _PMGPPPVSTPL_ REV__ENSG00000119596|ENST00000325680|YLPM1 13.90604991867851 0.7458848613461305 4 MPTP{I|L} 5 -1 25.886 0.0 0.0 2.3714 0.0 0.0 534.28129775215 0.0 534.28129775215 0.0 13.411290632962718 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.0 MPTP{I|L} 2.3714 - 187 1 1.839 49726.4 1.0 2966 4408 7373 HBL1_DMSO_200M_050219_2,7376 HBL1_DMSO_200M_050219_2,7376,PMGPPPVSTPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7377 39.849 50.0 930400.0 25 0 91360.0 + 24974 MPPPPPQGV 9 87 460.23852327962805 918.462493626056 2 460.2392455935478 MULTI CID FTMS 0 0 0 7373 918915.6875 0.0495852259108357 -50 2.443916320800781 4 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 4 {[RE]|[WV]}HP[QP]GV 8 4 + 26.38 0.0 0.0 2.8722 2.8722 76.641 0.0 0.0 0.0 10.182372115689091 5.575764706045952 5.575764706045952 12.20667748014435 0 1.0 0.0 0.0 0.3807196863200844 {[RE]|[WV]}HP[QP]GV;{[RE]|[WV]}HE[H{I|L}]V 2.8722;1.5432 -;- 242 + 1 1.839 41985.6 1.0 2967 4408 7373 HBL1_DMSO_200M_050219_2,7377 HBL1_DMSO_200M_050219_2,7377,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7378 39.852 127.0 564610.0 25 0 53417.0 -1 LPQVGGQCC 9 84 481.2153558863525 960.4161588395052 2 481.2154113650322 MULTI CID FTMS 0 0 0 7373 362180.4375 0.7021008551500738 -2 0.0431594848632812 5 Carbamidomethyl (C) _LPQVGGQC(Carbamidomethyl (C))C_ ENST00000429422.5_2_3:47893728-47893833:-|nuORF 7.289230182591677 0.6602208344931196 4 {I|L}P 2 -1 28.583 0.0 0.0 2.9762 0.0 0.0 0.0 747.2606905572874 747.2606905572874 16.888793896675267 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {I|L}P 2.9762 + + 82 + 1 1.839 60575.1 1.0 2968 4408 7373 HBL1_DMSO_200M_050219_2,7378 HBL1_DMSO_200M_050219_2,7378,LPQVGGQCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7380 39.858 224.0 270290.0 25 0 32425.0 + 36296 SYIKSSSSL 9 84 486.2555492346999 970.4965455361998 2 486.2560607790947 MULTI CID FTMS 0 0 0 7379 278330.75 0.3543503500263338 6 -0.2109603881835937 1 Unmodified _SYIKSSSSL_ ENSG00000184661|ENST00000330560|CDCA2 25.399314129420983 0.2080152500878129 4 {[TV]|[{I|L}S]}[{M(Oxidation (M))|F}E]{I|L}YS{I|L} 8 5 {[TV]|[{I|L}S]}[{M(Oxidation (M))|F}E]{I|L}Y + + 18.073 2.6593 0.35345 1.8623 1.8623 44.494 0.0 0.0 0.0 0.0 3.36819398339564 0.0 0.0 0 0.0 0.0 0.25 0.0 {[TV]|[{I|L}S]}[{M(Oxidation (M))|F}E]{I|L}YS{I|L} 1.8623 - 59 + 1 1.839 51772.2 1.0 2969 4409 7379 HBL1_DMSO_200M_050219_2,7380 HBL1_DMSO_200M_050219_2,7380,SYIKSSSSL False True SYIKSSSSL 39.858329 486.256060779095 5475741.5 7379.0 ENSG00000184661|ENST00000330560|CDCA2 6.485378901163737 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7381 39.872 800.0 118490.0 25 0 9090.2 + 24708 MNYNKEFDRA 10 107 644.2915372921995 1286.5685216511988 2 644.2912475466728 MULTI CID FTMS 0 0 0 7379 117224.640625 0.7359524941130192 -1 0.0106163024902343 2 Unmodified _MNYNKEFDRA_ REV__ENSG00000113140|ENST00000231061|SPARC 13.90604991867851 0.6142120002215601 4 [MN]PN{I|L}NAD 8 -1 63.18 0.0 0.0 4.9108 0.0 0.0 0.0 414.17497003996846 414.17497003996846 32.71192284133327 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.4247425010840047 [MN]PN{I|L}NAD 4.9108 - 171 + 1 1.839 72030.1 0.6100000143051147 2970 4409 7379 HBL1_DMSO_200M_050219_2,7381 HBL1_DMSO_200M_050219_2,7381,MNYNKEFDRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7382 39.886 800.0 205650.0 25 0 35466.0 + 175 AAMSVAQRV 9 152 466.7521593839042 931.4897658346084 2 466.7528869509697 MULTI CID FTMS 0 0 0 7379 128436.9296875 0.5672434955962871 -3 0.0537757873535156 3 Unmodified _AAMSVAQRV_ ENSG00000109606|ENST00000336812|DHX15 41.8396318013385 0.0653578398400075 4 AAMSVAQRV 9 0 + 63.166 0.0 0.0 6.7812 6.7812 80.659 0.0 0.0 0.0 22.37643016799588 4.684438542926195 4.684438542926195 3.0102999566398125 0 1.086696871556164 1.5228787452803376 0.0 0.5356668758921829 + + AAMSVAQRV;AAMVSAQRV;AAMSVA[RN]{I|L};AAMVSA[RN]{I|L};AAMSVA[AG]RV;AAMVSA[AG]RV;AAMSVA{[QV]|[N{I|L}]|[RA]|[KV]}GV;AAMVSA{[QV]|[N{I|L}]|[RA]|[KV]}GV;AAMKA[K{I|L}]{[CP]|[EA]};AAMKAP[KC]{I|L} 6.7812;6.458;6.2783;5.9551;5.7927;5.4695;4.6801;4.3569;2.562;2.2866 +;-;-;-;-;-;-;-;-;- + 346 + 1 1.839 127599.8 0.6600000262260437 2971 4409 7379 HBL1_DMSO_200M_050219_2,7382 HBL1_DMSO_200M_050219_2,7382,AAMSVAQRV True True AAMSVAQRV 39.885981 466.75288695097 1139488.75 7379.0 ENSG00000109606|ENST00000336812|DHX15 6.3186354637146 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7384 39.89 6.1 11011000.0 25 0 1250200.0 + 41299 VPHTRPVSL 9 68 503.2960277940775 1004.577502654955 2 503.2958251833916 MULTI CID FTMS 0 0 0 7383 9901831.0 0.7524900153920349 -4 0.0877342224121093 1 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 45.69961567697781 0.0497987121815769 4 VPHT 4 5 67.964 0.0 0.0 6.7654 0.0 0.0 0.0 567.3273900664828 567.3273900664828 56.54390133769952 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 1.2302046884880935 0.0 + VPHT 6.7654 + + 78 + 1 1.839 56937.3 1.0 2972 4410 7383 HBL1_DMSO_200M_050219_2,7384 HBL1_DMSO_200M_050219_2,7384,VPHTRPVSL True True VPHTRPVSL 39.890322 503.295825183392 1358880368.0 7383.0 ENST00000412609.5_1_19:40170059-40174276:+|nuORF 8.101398150126139 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7385 39.892 14.0 4869000.0 25 0 282070.0 + + 26501 DPNKQVIRV 9 87 535.3209181080251 1068.6272832828502 2 535.3199340701103 MULTI CID FTMS 0 0 0 7383 4049362.75 0.7274817499102632 -4 0.0877342224121093 2 Unmodified _NVDLIRIQV_ nc|ENSG00000100353|O15371-2|EIF3D;ENSG00000100353|ENST00000216190|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D;ENST00000462641.1_1_22:36907036-36908721:-|nuORF 22.736283301280096 0.2418982879461534 4 VNNKQV{I|L}RV 9 -1 + 40.225 0.0 0.0 3.7641 3.7641 73.0 0.0 0.0 0.0 17.120572375850216 4.034343192154566 4.034343192154566 6.020599913279618 0 0.0 0.0 0.0 0.3494850021680094 VNNKQV{I|L}RV;VNNKVQ{I|L}RV;VNNKVR{I|L}QV;VGGNKQV{I|L}RV;VNGGKQV{I|L}RV;VNNK[AG]V{I|L}RV;VEKPTQ{I|L}RV;VEKPTR{I|L}QV;VNGGKVQ{I|L}RV;VGGNKVQ{I|L}RV 3.7641;3.2007;3.0796;2.9025;2.9025;2.9025;2.5269;2.4057;2.3391;2.3391 -;-;-;-;-;-;-;-;-;- 382 + 1 1.839 59455.7 1.0 2973 4410 7383 HBL1_DMSO_200M_050219_2,7385 HBL1_DMSO_200M_050219_2,7385,NVDLIRIQV False False DPNKQVIRV 39.891501 535.31993407011 77238568.0 7383.0 nc|ENSG00000100353|O15371-2|EIF3D;;ENSG00000100353|ENST00000216190|EIF3D;;nc|ENSG00000100353|O15371-3|EIF3D;;ENST00000462641.1_1_22:36907036-36908721:-|nuORF 4.679187456766765 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7387 39.896 15.0 3736300.0 25 0 591960.0 + 45852 YYQDTPKQI 9 76 578.287769165863 1154.560985398526 2 578.2878906130791 MULTI CID FTMS 0 0 0 7386 4094502.75 0.7431299771480199 -3 0.0500755310058593 1 Unmodified _YYQDTPKQI_ ENSG00000048162|ENST00000614830|NOP16 47.74868867922204 0.0453060283459952 4 YYQDTPKQ{I|L} 9 0 + 68.093 0.0 0.0 5.8978 5.8978 85.257 0.0 0.0 0.0 51.1696953623826 11.3360411678469 11.3360411678469 9.208187539523747 0 0.75 2.0 0.3807196863200844 0.9247425010840048 + + YYQDTPKQ{I|L};YY[AG]DTPKQ{I|L};YYQDTPK[AG]{I|L};YY[AG]DTPK[AG]{I|L};YY{[SA]|[TG]}{[DA]|[EG]}PKQ{I|L};[KP]Q{[ES]|[DT]|[{I|L}C]}[Q{I|L}]YY;[KP]Q{[ES]|[DT]|[{I|L}C]}[YQ]Y{I|L} 5.8978;5.1002;4.7323;3.9386;3.1944;0.0354;0.0015831 +;-;-;-;-;-;- + 225 + 1 1.839 50831.6 1.0 2974 4411 7386 HBL1_DMSO_200M_050219_2,7387 HBL1_DMSO_200M_050219_2,7387,YYQDTPKQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7388 39.898 72.0 672320.0 25 0 90789.0 + -1 LMQKSPYPL 9 72 546.7913457940977 1091.5681386549952 2 546.7916137576103 MULTI CID FTMS 0 0 0 7386 755112.8125 0.6802933045040175 5 -0.2956008911132812 2 Oxidation (M) _LM(Oxidation (M))QKSPYPL_ REV__ENST00000286186.10_1_2:202074038-202074122:+|nuORF 22.736283301280096 0.2418982879461534 4 [TP]MK[HA]PTP 9 -1 60.613 0.0 0.0 5.5528 0.0 0.0 0.0 128.0705549640317 128.0705549640317 50.81993528765344 0.0 0.0 0.0 0 1.7302046884880935 1.6989700043360187 0.8494850021680094 0.0 [TP]MK[HA]PTP 5.5528 - 293 1 1.839 43105.3 1.0 2975 4411 7386 HBL1_DMSO_200M_050219_2,7388 HBL1_DMSO_200M_050219_2,7388,LMQKSPYPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7389 39.911 763.0 257590.0 25 0 27106.0 + + 35336 TFQSTKAVY 9 170 522.7711694757231 1043.5277860182462 2 522.7719604372978 MULTI CID FTMS 0 0 0 7386 262209.1875 0.477221144187239 4 -0.1715011596679687 3 Unmodified _STAKGAVFTY_ ENST00000595288.5_1_19:7687207-7690948:-|nuORF;ENSG00000076924|ENST00000358368|XAB2 51.629811660486645 0.0705852162080619 4 [KT]SAGAV[{M(Oxidation (M))|F}T]Y 10 -1 + 44.18 0.0 0.0 4.2337 4.2337 65.323 0.0 0.0 0.0 3.6324207347211015 3.6324207347211015 3.6324207347211015 0.3824186505213589 0 0.4247425010840047 0.0 1.8909593382398109 1.1549471895720984 [KT]SAGAV[{M(Oxidation (M))|F}T]Y;[KT]SAGAT{M(Oxidation (M))|F}VY;[KT]SAQV[{M(Oxidation (M))|F}T]Y;[KT]SAQT{M(Oxidation (M))|F}VY;{[VA]|[{I|L}G]}QAQVAQET;[KT]SAVQ[{M(Oxidation (M))|F}T]Y;{[VA]|[{I|L}G]}QAGAVAQET;[AG]{I|L}GAQVAQET;[KT]SAV[YN]VY;{[VA]|[{I|L}G]}QQAVAQET 4.2337;4.197;3.9337;3.897;3.8856;3.7785;3.7059;3.5937;3.5811;3.3642 -;-;-;-;-;-;-;-;-;- 3620 1 1.839 155709.0 1.0 2976 4411 7386 HBL1_DMSO_200M_050219_2,7389 HBL1_DMSO_200M_050219_2,7389,STAKGAVFTY False False TFQSTKAVY 39.910733 522.771960437298 8285336.0 7386.0 ENST00000595288.5_1_19:7687207-7690948:-|nuORF;;ENSG00000076924|ENST00000358368|XAB2 5.903382619222005 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7390 39.914 181.0 287780.0 25 0 21812.0 -1 0 103 494.2646405675614 493.2573641009614 1 494.2638427615166 MULTI CID FTMS 0 0 0 7386 198422.890625 0.6041802934420012 -2 0.039459228515625 4 4 [{I|L}T]N{M(Oxidation (M))|F} 4 -1 + 34.437 0.0 0.0 6.9815 6.9815 90.472 0.0 0.0 0.0 13.22559982972642 13.010299956639813 13.010299956639813 9.719712763997563 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}T]N{M(Oxidation (M))|F};[{I|L}T]GG{M(Oxidation (M))|F};{[QS]|[NT]}{I|L}{M(Oxidation (M))|F};{[VA]|[{I|L}G]}{[SA]|[TG]}{M(Oxidation (M))|F};{[SA]|[TG]}G{I|L}{M(Oxidation (M))|F};[YV]NV 6.9815;5.011;2.8167;1.6274;1.5961;0.6288 -;-;-;-;-;- 66 1 1.839 42591.3 1.0 2977 4411 7386 HBL1_DMSO_200M_050219_2,7390 HBL1_DMSO_200M_050219_2,7390, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7391 39.919 264.0 515770.0 25 0 31013.0 + 43149 VYPPSAAKM 9 113 482.2526347707442 962.4907166082884 2 482.2516052126884 MULTI CID FTMS 0 0 0 7386 175021.4375 0.7541117281652487 14 -0.805908203125 5 Unmodified _VYPPSAAKM_ ENSG00000150907|ENST00000379561|FOXO1 18.1463463914782 0.3454829746528889 4 [YV]PP 4 5 35.674 0.0 0.0 3.7064 0.0 0.0 0.0 503.2305086725219 503.2305086725219 22.90989020323845 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [YV]PP 3.7064 + + 97 + 1 1.839 109291.0 1.0 2978 4411 7386 HBL1_DMSO_200M_050219_2,7391 HBL1_DMSO_200M_050219_2,7391,VYPPSAAKM False True VYPPSAAKM 39.91911 482.251605212688 9487615.0 7386.0 ENSG00000150907|ENST00000379561|FOXO1 4.49840799967448 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7393 39.923 11.0 5827300.0 25 0 778130.0 5419 DLLNLNRLV 9 86 357.2173139370643 1068.630112411393 3 357.2170287966728 MULTI CID FTMS 0 0 0 7392 4674095.5 0.8736803471920555 -3 0.0670433044433593 1 Unmodified _DLLNLNRLV_ ENSG00000102786|ENST00000311234|INTS6;ENST00000486195.6_1_13:51961577-52026149:-|nuORF;ENST00000491723.5_1_13:51995314-52026679:-|nuORF;ENST00000491997.2_1_13:51997202-52025480:-|nuORF;nc|ENSG00000102786|Q9UL03-2|INTS6;nc|ENSG00000102786|Q9UL03-3|INTS6 20.453626601364224 0.2830276176381075 4 QKS{I|L}HVQ 7 8 38.615 0.0 0.0 3.6135 0.0 0.0 230.16453592097332 0.0 230.16453592097332 0.0 5.440068145837451 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.5941876774005248 QKS{I|L}HVQ 3.6135 - 214 + 1 1.829 59669.6 1.0 2979 4412 7392 HBL1_DMSO_200M_050219_2,7393 HBL1_DMSO_200M_050219_2,7393,DLLNLNRLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7394 39.925 31.0 1263800.0 25 0 145560.0 -1 AEKDTMATV 9 66 491.2299418944989 980.4453308557978 2 491.2300292849541 MULTI CID FTMS 0 0 0 7392 1841256.5 0.952758604809286 1 -0.0054664611816406 2 Oxidation (M) _AEKDTM(Oxidation (M))ATV_ ENSG00000168124|ENST00000304646|OR1F1 27.628801355627647 0.1796483985696185 4 {[TV]|[{I|L}S]}A[DG]T{M(Oxidation (M))|F}ATV 10 -1 + 43.594 0.0 0.0 4.4463 4.4463 82.898 0.0 0.0 0.0 13.266062568876716 26.60396270529162 13.266062568876716 20.0 0 0.8935078169319297 1.0969100130080565 0.3054621874040891 0.0 {[TV]|[{I|L}S]}A[DG]T{M(Oxidation (M))|F}ATV;[TA]V[DG]T{M(Oxidation (M))|F}ATV;[TA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DEATV;[TA]WW{M(Oxidation (M))|F}ATV 4.4463;2.4064;1.4286;1.3865 -;-;-;- 144 1 1.829 34385.9 1.0 2980 4412 7392 HBL1_DMSO_200M_050219_2,7394 HBL1_DMSO_200M_050219_2,7394,AEKDTMATV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7396 39.931 244.0 379590.0 25 0 30641.0 3446 CDMSHWLNVK 10 88 616.7788208008598 1231.5430886685194 2 616.7787963747978 MULTI CID FTMS 0 0 0 7395 463940.625 1.0 0 0.0 1 Unmodified _CDMSHWLNVK_ ENSG00000135220|ENST00000251566|UGT2A3 13.042465956692816 0.6287021003332052 4 N{[QV]|[N{I|L}]|[RA]|[KV]} 3 7 22.364 0.0 0.0 1.8159 0.0 0.0 872.3260304183226 0.0 872.3260304183226 0.0 -2.116907486102061 -2.116907486102061 0.0 0 0.805462187404089 0.0 0.0 0.6861818737241735 + N{[QV]|[N{I|L}]|[RA]|[KV]} 1.8159 + + 211 + 1 1.829 72629.4 1.0 2981 4413 7395 HBL1_DMSO_200M_050219_2,7396 HBL1_DMSO_200M_050219_2,7396,CDMSHWLNVK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7397 39.937 340.0 148350.0 25 0 16982.0 + 15708 IQTDPNSNDGL 11 84 587.2729213554547 1172.5312897777094 2 587.2736083865166 MULTI CID FTMS 0 0 0 7395 178175.734375 0.531667744463721 -2 0.033050537109375 2 Unmodified _IQTDPNSNDGL_ ENSG00000170558|ENST00000269141|CDH2;nc|ENSG00000170558|P19022-2|CDH2 40.23920728925047 0.2087110615831976 4 [Q{I|L}]TD 4 7 24.481 0.0 0.0 2.0879 0.0 0.0 0.0 712.2892614502667 712.2892614502667 -1.2050654486819212 0.0 -1.2050654486819212 0.0 0 0.5 0.0 0.4247425010840047 0.3807196863200844 + [Q{I|L}]TD 2.0879 + + 292 1 1.829 45363.9 1.0 2982 4413 7395 HBL1_DMSO_200M_050219_2,7397 HBL1_DMSO_200M_050219_2,7397,IQTDPNSNDGL False True IQTDPNSNDGL 39.937362 587.273608386517 2403366.25 7395.0 nc|ENSG00000170558|P19022-2|CDH2;;ENSG00000170558|ENST00000269141|CDH2 6.028372287750244 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7398 39.942 267.0 810950.0 25 0 201300.0 + -1 PHTRPVSL 8 136 454.228595683888 453.221319217288 1 454.2289916872978 MULTI CID FTMS 0 0 0 7395 278734.0 0.4991518408567817 -2 0.033050537109375 3 ENST00000412609.5_1_19:40170059-40174276:+|nuORF 4 {I|L} 1 -1 11.99 0.0 0.0 2.6454 0.0 0.0 322.12607188017705 0.0 322.12607188017705 0.0 1.1522446068913703 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.6454 - 29 + 1 1.829 169806.3 1.0 2983 4413 7395 HBL1_DMSO_200M_050219_2,7398 HBL1_DMSO_200M_050219_2,7398, False False PHTRPVSL 39.942286 454.228991687298 1292699.125 7395.0 ENST00000412609.5_1_19:40170059-40174276:+|nuORF 4.24037226041158 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7399 39.947 238.0 450420.0 25 0 71461.0 + 38158 TPPPGPSVV 9 118 425.7372055535758 849.4598581739516 2 425.7368957400322 MULTI CID FTMS 0 0 0 7395 250587.40625 0.6208581407371373 16 -0.9447402954101562 4 Unmodified _TPPPGPSVV_ REV__ENST00000430334.7_1_17:43514711-43515125:-|nuORF 16.942295170755138 0.3780752226737986 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[Y{I|L}]{I|L}[TP] 7 -1 + 28.714 0.0 0.0 3.3802 3.3802 79.645 0.0 0.0 0.0 13.229006712113645 3.0102999566398125 3.0102999566398125 21.51618702236867 0 0.0 2.0 0.5 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[Y{I|L}]{I|L}[TP];[R{M(Oxidation (M))|F}]P[KC]S{I|L};{[HG]|PP}[PG]TA{I|L}[TP];[R{M(Oxidation (M))|F}]PT[KC]V;[R{M(Oxidation (M))|F}]P[KC]TV;{[HG]|PP}A[PS]A{I|L}[TP] 3.3802;0.84729;0.57143;0.44709;0.2068;0.16833 -;-;-;-;-;- 177 1 1.829 90351.6 1.0 2984 4413 7395 HBL1_DMSO_200M_050219_2,7399 HBL1_DMSO_200M_050219_2,7399,TPPPGPSVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7400 39.961 800.0 268250.0 25 0 20919.0 + -1 KLPKQPVIVKA 11 202 408.11373881834777 407.1064623517478 1 408.1142455935478 MULTI CID FTMS 0 0 0 7395 144952.96875 0.3412609046716045 12 -0.772857666015625 5 ENSG00000166441|ENST00000314138|RPL27A 4 V 1 -1 11.99 0.0 0.0 2.9451 0.0 0.0 290.02681712645324 0.0 290.02681712645324 0.0 1.901056208558032 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.9451 - 51 + 1 1.829 169143.1 0.6899999976158142 2985 4413 7395 HBL1_DMSO_200M_050219_2,7400 HBL1_DMSO_200M_050219_2,7400, False False KLPKQPVIVKA 39.960547 408.114245593548 3806761.25 7395.0 ENSG00000166441|ENST00000314138|RPL27A 3.793228546778361 3.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7402 39.965 114.0 393660.0 25 0 32043.0 + 2467 AQYDGAYKV 9 80 507.7483902487239 1013.4822275642478 2 507.7483093142509 MULTI CID FTMS 0 0 0 7401 321801.125 0.4253308553293634 7 -0.5662574768066406 1 Unmodified _AQYDGAYKV_ ENSG00000168291|ENST00000302746|PDHB;ENST00000469827.1_1_3:58417358-58419536:-|nuORF;ENST00000480626.5_1_3:58417333-58419536:-|nuORF;ENST00000482894.5_1_3:58417133-58419536:-|nuORF;nc|ENSG00000168291|P11177-2|PDHB;nc|ENSG00000168291|P11177-3|PDHB 22.736283301280096 0.2418982879461534 4 [QA]YDQYKV 8 2 + 48.572 0.0 0.0 4.7926 4.7926 81.312 0.0 0.0 0.0 29.03963081882736 10.0854292192491 10.0854292192491 9.262137858390808 0 0.5 0.958607314841775 0.0 0.0 [QA]YDQYKV;[QA]YD[AG]YKV 4.7926;3.8787 -;+ + 104 + 1 1.829 41082.0 1.0 2986 4414 7401 HBL1_DMSO_200M_050219_2,7402 HBL1_DMSO_200M_050219_2,7402,AQYDGAYKV False True AQYDGAYKV 39.964959 507.748309314251 10197691.0 7401.0 ENST00000482894.5_1_3:58417133-58419536:-|nuORF;;ENSG00000168291|ENST00000302746|PDHB;;nc|ENSG00000168291|P11177-2|PDHB;;ENST00000480626.5_1_3:58417333-58419536:-|nuORF;;ENST00000469827.1_1_3:58417358-58419536:-|nuORF;;nc|ENSG00000168291|P11177-3|PDHB 6.756661732991536 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7403 39.976 647.0 317300.0 25 0 31810.0 + 2002 APAPPSKVI 9 141 440.2685915844583 878.5226302357165 2 440.2686035037041 MULTI CID FTMS 0 0 0 7401 357393.03125 0.8813943238325679 2 -0.2266006469726562 2 Unmodified _APAPPSKVI_ ENSG00000062650|ENST00000298767|WAPL;nc|ENSG00000062650|Q7Z5K2-2|WAPL;nc|ENSG00000062650|Q7Z5K2-3|WAPL 60.07390631473393 0.0260411565414776 4 APAP[PS]KV{I|L} 9 0 + 79.172 0.0 0.0 9.0119 9.0119 91.83 0.0 0.0 0.0 29.60893001920488 8.603380065709928 8.603380065709928 8.603380065709928 0 1.9124379954164592 1.6989700043360187 0.3494850021680094 0.0 + + APAP[PS]KV{I|L};APAP[PS]K{I|L}V;[PA]AVAA[PA]V{I|L};[PA]AP[PS]KV{I|L};[PA]AP[KP]SV{I|L};[PA]PKPASV{I|L};[PA]PA[PS]KV{I|L};[PA]PA[KP]SV{I|L};[PA]A{I|L}Q[PA]V{I|L};[PA]PS[PA]KV{I|L} 9.0119;8.0326;5.0674;5.0142;4.8487;4.6405;3.6494;3.484;3.4665;3.1565 +;-;-;+;-;-;-;-;-;- + 743 + 1 1.829 157641.1 1.0 2987 4414 7401 HBL1_DMSO_200M_050219_2,7403 HBL1_DMSO_200M_050219_2,7403,APAPPSKVI True True APAPPSKVI 39.976224 440.268603503704 6994358.5 7401.0 nc|ENSG00000062650|Q7Z5K2-3|WAPL;;nc|ENSG00000062650|Q7Z5K2-2|WAPL;;ENSG00000062650|ENST00000298767|WAPL 5.82078742980957 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7404 39.99 800.0 128970.0 25 0 13011.0 + 32638 SAYNSLGLEV 10 139 526.7666704801431 1051.5187880270862 2 526.7667724490166 MULTI CID FTMS 0 0 0 7401 221878.59375 1.0 0 0.0 3 Unmodified _SAYNSLGLEV_ REV__ENSG00000053371|ENST00000235835|AKR7A2;REV__ENST00000492217.1_1_1:19634582-19638531:-|nuORF 31.26834338654808 0.266153677697784 4 {[SA]|[TG]}Y{M(Oxidation (M))|F}VEVQ 8 -1 57.855 0.0 0.0 5.502 0.0 0.0 0.0 125.07253442935782 125.07253442935782 10.858725583731411 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.75 0.6861818737241735 {[SA]|[TG]}Y{M(Oxidation (M))|F}VEVQ 5.502 - 1458 + 1 1.829 85980.3 0.9700000286102296 2988 4414 7401 HBL1_DMSO_200M_050219_2,7404 HBL1_DMSO_200M_050219_2,7404,SAYNSLGLEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7405 40.004 800.0 227210.0 25 0 19864.0 + 21199 LPDEKQNYV 9 162 553.2807495671906 1104.546946201181 2 553.2812988162041 MULTI CID FTMS 0 0 0 7401 167063.078125 0.8872841059436128 -1 0.03594970703125 4 Unmodified _LPDEKQNYV_ ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 53.832793166522166 0.0319663582346103 4 YYGSQ{I|L}{I|L}VY 9 8 + 62.339 0.0 0.0 5.6439 5.6439 80.905 0.0 0.0 0.0 6.478174818886373 6.439389643433628 6.439389643433628 6.478174818886373 0 0.7429928190999391 2.0 0.6694451763165201 0.9163865622122672 YYGSQ{I|L}{I|L}VY;[DP]NGSQ{I|L}{I|L}VY;[DP]GGGSQ{I|L}{I|L}VY;[DP]GNSQ{I|L}{I|L}VY;[DP]NGS[AG]{I|L}{I|L}VY;YYG[{I|L}T]N{I|L}VY;[DP]GNS[AG]{I|L}{I|L}VY;YYGS[AG]{I|L}{I|L}VY;[DP]NG[{I|L}T]N{I|L}VY;[DP]GGG[{I|L}T]N{I|L}VY 5.6439;5.0574;5.0199;4.9697;4.2277;4.1538;4.1399;3.9806;3.5673;3.5299 -;-;-;-;-;-;-;-;-;- 1739 1 1.829 139479.7 0.8799999952316284 2989 4414 7401 HBL1_DMSO_200M_050219_2,7405 HBL1_DMSO_200M_050219_2,7405,LPDEKQNYV True True LPDEKQNYV 40.003888 553.281298816204 1077873.875 7401.0 nc|ENSG00000079785|Q92499-2|DDX1;;nc|ENSG00000079785|Q92499-3|DDX1;;ENSG00000079785|ENST00000233084|DDX1 4.5256946086883545 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7406 40.018 800.0 429350.0 25 0 63535.0 85 AAGPSPPAV 9 197 383.7083514172677 0 383.7083923220634 PEAK CID FTMS 0 0 0 7401 169852.75 0.2569679296432141 -1 0.03594970703125 5 Unmodified _AAGPSPPAV_ ENST00000546023.1_1_6:160210088-160210586:-|nuORF 7.910154910731844 0.3362437653303669 4 Y{I|L}R 3 9 22.466 0.0 0.0 2.9352 0.0 0.0 115.0273462898104 215.10418115787343 330.1315274476839 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.5796896906561032 Y{I|L}R 2.9352 - 24 + 1 1.829 265071.2 0.7099999785423279 2990 4414 7401 HBL1_DMSO_200M_050219_2,7406 HBL1_DMSO_200M_050219_2,7406,AAGPSPPAV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7407 40.032 800.0 802190.0 25 0 285140.0 6697 ECKECRKCFYQ 11 122 775.8285872373588 1549.6426215415174 2 775.8304321169853 MULTI CID FTMS 0 0 0 7401 159085.65625 0.7074222457748269 -1 0.03594970703125 6 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 41.95555342248728 0.1822715950200113 4 [QA]HDEAQQDA{M(Oxidation (M))|F}YQ 13 9 + 95.329 0.0 0.0 6.1517 6.1517 76.17 0.0 0.0 0.0 1.7037476561366844 79.73384490641205 1.7037476561366844 1.8887938966752529 0 1.424742501084005 0.0 1.336696871556164 1.2302046884880935 [QA]HDEAQQDA{M(Oxidation (M))|F}YQ;[QA][YR]SACQDA{M(Oxidation (M))|F}YQ;[YQ]{[QV]|[N{I|L}]|[RA]|[KV]}SACQDA{M(Oxidation (M))|F}YQ;[QA]DHEAQQDA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}YQ;[QA]HD[KP]CQDA{M(Oxidation (M))|F}YQ;[AG]AHDEAQQDA{M(Oxidation (M))|F}YQ;[AG]A[YR]SACQDA{M(Oxidation (M))|F}YQ;[AG]Y{[QV]|[N{I|L}]|[RA]|[KV]}SACQDA{M(Oxidation (M))|F}YQ;[HD]EAQAQQDA{M(Oxidation (M))|F}YQ 6.1517;6.0298;6.0298;5.9244;5.8812;5.8327;5.805;5.6831;5.6831;5.6575 -;-;-;-;-;-;-;-;-;- 5891 1 1.829 441464.8 0.7900000214576721 2991 4414 7401 HBL1_DMSO_200M_050219_2,7407 HBL1_DMSO_200M_050219_2,7407,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7408 40.047 800.0 328860.0 25 0 26929.0 20399 LLHAFDGRP 9 247 342.5226384635297 1024.5460859907892 3 342.5222350955009 MULTI CID FTMS 0 0 0 7401 151229.4375 0.7279405709138724 15 -0.9087905883789062 7 Unmodified _LLHAFDGRP_ ENSG00000203705|ENST00000366974|TATDN3;nc|ENSG00000203705|Q17R31-2|TATDN3;nc|ENSG00000203705|Q17R31-3|TATDN3;nc|ENSG00000203705|Q17R31-4|TATDN3;nc|ENSG00000203705|Q17R31-5|TATDN3 7.910154910731844 0.6385446671287552 4 VV 2 9 20.969 0.0 0.0 2.0467 0.0 0.0 0.0 823.387033453338 823.387033453338 1.303337684950062 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV 2.0467 - 159 + 1 1.829 206185.8 0.6399999856948853 2992 4414 7401 HBL1_DMSO_200M_050219_2,7408 HBL1_DMSO_200M_050219_2,7408,LLHAFDGRP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7409 40.049 108.0 857360.0 25 0 45801.0 -1 DQRCCLQEK 9 86 590.2663733565205 1178.5181937798409 2 590.2653076052666 MULTI CID FTMS 0 0 0 7401 132235.890625 0.0458959611062679 -2 0.0414161682128906 8 Carbamidomethyl (C) _DQRC(Carbamidomethyl (C))CLQEK_ ENSG00000121957|ENST00000264126|GPSM2 16.149105407346934 0.3995459350917656 4 QHVDAAEK 8 -1 81.88 0.0 0.0 6.9477 0.0 0.0 282.08311659980626 0.0 282.08311659980626 0.0 41.23957558986824 0.0 0.0 0 3.1237125054200234 0.0 0.0 0.7302046884880937 QHVDAAEK 6.9477 - 459 1 1.829 77835.1 1.0 2993 4414 7401 HBL1_DMSO_200M_050219_2,7409 HBL1_DMSO_200M_050219_2,7409,DQRCCLQEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7410 40.063 800.0 29985.0 25 0 1925.7 -1 0 40 1076.642382800579 0 1076.642382800579 PEAK CID FTMS 0 0 0 -1 0 9 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.829 28857.6 0.5400000214576721 2994 4414 7401 HBL1_DMSO_200M_050219_2,7410 HBL1_DMSO_200M_050219_2,7410, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7412 40.067 8.2 7069800.0 25 0 1445000.0 + 41745 VPTDPPRTI 9 49 498.2802641779709 994.5459754227418 2 498.2797119021416 MULTI CID FTMS 0 0 0 7411 7445763.5 1.0 0 0.0 1 Unmodified _VPTDPPRTI_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 19.361941925380144 0.3125782356748823 4 VPTDP 5 4 67.206 0.0 0.0 6.7575 0.0 0.0 0.0 482.2747591608032 482.2747591608032 41.97235328539264 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VPTDP 6.7575 + + 58 + 1 1.822 53304.7 1.0 2995 4415 7411 HBL1_DMSO_200M_050219_2,7412 HBL1_DMSO_200M_050219_2,7412,VPTDPPRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7413 40.069 35.0 1666400.0 25 0 291570.0 21320 LPESSRGLV 9 66 479.2720558895423 956.5295588458846 2 479.2718688845634 MULTI CID FTMS 0 0 0 7411 1725287.0 0.8753290975298136 6 -0.4637565612792969 2 Unmodified _LPESSRGLV_ ENST00000590866.2_1_19:1358969-1359134:+|nuORF 32.78568957990786 0.1150597335874693 4 {I|L}PESS 5 4 63.488 0.0 0.0 6.6373 0.0 0.0 0.0 440.2625826471313 440.2625826471313 37.54554718523508 0.0 0.0 0.0 0 0.7302046884880937 1.3979400086720375 0.4247425010840047 0.0 + {I|L}PESS 6.6373 + + 30 + 1 1.822 54064.0 1.0 2996 4415 7411 HBL1_DMSO_200M_050219_2,7413 HBL1_DMSO_200M_050219_2,7413,LPESSRGLV True True IPESSGRIV 40.068502 479.271868884563 126040944.0 7411.0 nc|ENSG00000101096|Q13469|NFATC2;;nc|ENSG00000101096|Q13469-5|NFATC2;;nc|ENSG00000101096|Q13469-4|NFATC2;;ENSG00000101096|ENST00000371564|NFATC2;;nc|ENSG00000101096|Q13469-3|NFATC2 4.025257587432861 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7414 40.07 25.0 2373600.0 25 0 264660.0 + 3925 DALKEKVI 8 85 458.2792271670636 914.5439014009272 2 458.2792846560478 MULTI CID FTMS 0 0 0 7411 2717485.0 1.0 0 0.0 3 Unmodified _DALKEKVI_ ENSG00000168906|ENST00000306434|MAT2A;nc|ENSG00000168906|P31153-2|MAT2A 79.59630418116434 0.0936370603175206 4 {[DA]|[EG]}{I|L}KEKV{I|L} 8 0 + 84.418 0.0 0.0 9.2306 9.2306 96.834 0.0 0.0 0.0 11.48657795251836 11.48657795251836 11.48657795251836 17.84189756716492 0 2.223197507588033 2.0 0.7059771852360797 0.0 + + {[DA]|[EG]}{I|L}KEKV{I|L};{[SA]|[TG]}VVAEKV{I|L};{[DA]|[EG]}{I|L}KT[VG]V{I|L};{[SA]|[TG]}VVK{I|L}AD{I|L};{[SA]|[TG]}VKV{I|L}AD{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAEKV{I|L};{[DA]|[EG]}{I|L}K[K{I|L}]D{I|L};{[SA]|[TG]}VVK{[CP]|[EA]}V{I|L};[K{I|L}]DAEKV{I|L};{[SA]|[TG]}VKV{[CP]|[EA]}V{I|L} 9.2306;7.2797;6.6647;6.5641;6.4386;6.3196;6.0869;5.7761;5.7185;5.6507 +;-;-;-;-;-;-;-;-;- + 913 1 1.822 52116.2 1.0 2997 4415 7411 HBL1_DMSO_200M_050219_2,7414 HBL1_DMSO_200M_050219_2,7414,DALKEKVI True True DALKEKVI 40.069681 458.279284656048 17883888.0 7411.0 nc|ENSG00000168906|P31153-2|MAT2A;;ENSG00000168906|ENST00000306434|MAT2A 5.264962991078694 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7415 40.071 49.0 1060600.0 25 0 135010.0 + -1 GEVMSEMNL 9 81 513.2171555276142 1024.4197581220285 2 513.2176391482353 MULTI CID FTMS 0 0 0 7411 1125040.25 0.0426708852818552 -6 0.2109603881835937 4 Oxidation (M) _GEVM(Oxidation (M))SEMNL_ REV__ENSG00000083307|ENST00000646743|GRHL2;REV__nc|ENSG00000083307|Q6ISB3-2|GRHL2 15.847184025352805 0.4077185912009129 4 {[DA]|[EG]}V 3 -1 30.062 0.0 0.0 2.9345 0.0 0.0 0.0 736.264642725797 736.264642725797 0.4474060134371882 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V 2.9345 + + 52 1 1.822 44538.8 1.0 2998 4415 7411 HBL1_DMSO_200M_050219_2,7415 HBL1_DMSO_200M_050219_2,7415,GEVMSEMNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7416 40.073 65.0 777430.0 25 0 128060.0 + -1 RKSMSAVM 8 71 471.22998375137854 940.4454145695572 2 471.2292663455009 MULTI CID FTMS 0 0 0 7411 672258.0 0.8157021245390023 4 -0.3690109252929687 5 2 Oxidation (M) _RKSM(Oxidation (M))SAVM(Oxidation (M))_ REV__ENSG00000076321|ENST00000209884|KLHL20;REV__nc|ENSG00000076321|Q9Y2M5-2|KLHL20 10.823927491677226 0.7510103885582552 4 AV{M(Oxidation (M))|F} 3 -1 34.693 0.0 0.0 3.689 0.0 0.0 605.2950306623062 0.0 605.2950306623062 0.0 23.723637474483468 0.0 0.0 0 1.0 0.0 0.0 0.0 AV{M(Oxidation (M))|F} 3.689 + + 51 1 1.822 46596.1 1.0 2999 4415 7411 HBL1_DMSO_200M_050219_2,7416 HBL1_DMSO_200M_050219_2,7416,RKSMSAVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7417 40.076 160.0 557580.0 25 0 51686.0 11309 GEVPNGYNV 9 120 474.7263455494248 947.4381381656495 2 474.7266113162041 MULTI CID FTMS 0 0 0 7411 484079.3125 0.150405570215193 -3 0.1439170837402343 6 Unmodified _GEVPNGYNV_ nc|ENSG00000211706|A0A0K0K1D8|TRBV6-1;nc|ENSG00000211721|A0A0K0K1A5|TRBV6-5;nc|ENSG00000211724|A0A0A6YYG2|TRBV6-6;nc|ENSG00000253188|A0A0A0MS04|TRBV6-7 21.74664581756881 0.2544899275067181 4 [AG]S[SG]GQAR{[SA]|[TG]} 11 9 + 27.31 0.0 0.0 2.8825 2.8825 63.831 0.0 0.0 0.0 1.5258800645485593 8.415453019029137 1.5258800645485593 1.5697496860860838 0 0.0 1.3979400086720375 0.2887254899964357 0.0 [AG]S[SG]GQAR{[SA]|[TG]};{NN|[MP]|[D{I|L}]|[EV]}MGQAR{[SA]|[TG]};{[SA]|[TG]}G[SG]GQAR{[SA]|[TG]};{[DA]|[EG]}VMQA[VG]{[SA]|[TG]};{[QS]|[NT]}[SG]GQAR{[SA]|[TG]};{NN|[MP]|[D{I|L}]|[EV]}GMQAR{[SA]|[TG]};[AG]S[NS]QAR{[SA]|[TG]};V[YN]YYQV;[AG]S[SG]G[AG]AR{[SA]|[TG]};[AG]S[SG]GQA[VG]{[SA]|[TG]} 2.8825;2.7169;2.439;2.3451;2.2965;2.2133;2.1885;1.9497;1.9191;1.9191 -;-;-;-;-;-;-;-;-;- 918 1 1.822 72394.6 1.0 3000 4415 7411 HBL1_DMSO_200M_050219_2,7417 HBL1_DMSO_200M_050219_2,7417,GEVPNGYNV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7418 40.079 195.0 482250.0 25 0 54137.0 + 26561 NVKVDPEIQ 9 113 521.2818410341322 1040.5491291350645 2 521.2825805544853 MULTI CID FTMS 0 0 0 7411 393058.21875 1.0 0 0.0 7 Unmodified _NVKVDPEIQ_ CON__P35908;CON__P35908v2;ENSG00000172867|ENST00000309680|KRT2 45.69961567697781 0.0497987121815769 4 {[NV]|[RG]}KVD[EP]{I|L}Q 9 0 + 34.548 0.0 0.0 3.3201 3.3201 65.852 0.0 0.0 0.0 2.0200820851809524 2.156907015634964 2.0200820851809524 2.0200820851809524 0 0.8807196863200843 0.0 0.0 0.6109243748081782 + + {[NV]|[RG]}KVD[EP]{I|L}Q;[KG][VG]VD[EP]{I|L}Q;[EP]{I|L}DVK{[NV]|[RG]}Q;[EP]{I|L}[QT]{[NV]|[RG]}{I|L}Q;[EP][WR]{[NV]|[RG]}{I|L}Q;[EP]{I|L}[QT]{I|L}{[NV]|[RG]}Q;[EP]D{I|L}VK{[NV]|[RG]}Q;[EP]{I|L}[WR]{[NV]|[RG]}Q;[EP][WR]{I|L}{[NV]|[RG]}Q;{[NV]|[RG]}[WR][EP]{I|L}Q 3.3201;3.126;2.4474;2.3946;2.2305;2.0287;1.9889;1.9847;1.8646;1.6349 +;-;-;-;-;-;-;-;-;- + 189 1 1.822 76905.4 1.0 3001 4415 7411 HBL1_DMSO_200M_050219_2,7418 HBL1_DMSO_200M_050219_2,7418,NVKVDPEIQ True True NVKVDPEIQ 40.079469 521.282580554485 2390361.25 7411.0 P35908;;P35908v2;;ENSG00000172867|ENST00000309680|KRT2 4.721829891204834 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 7419 40.09 614.0 292990.0 25 0 14196.0 + 35158 SRPDSILGMQF 11 140 633.8108642971252 1265.6071756610504 2 633.8113891482353 MULTI CID FTMS 0 0 0 7411 368425.5625 0.0816678599750513 -3 0.1439170837402343 8 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 43.77239144664712 0.1542841003880809 4 [AG]K{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 11 -1 + 100.2 0.0 0.0 7.9171 7.9171 82.696 0.0 0.0 0.0 10.665127121512938 16.575773191777927 10.665127121512938 2.525749891599532 0 1.4604093769761874 1.5228787452803376 0.9436726795685342 2.2128493362984765 [AG]K{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}QEQA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[AG]K{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQEQA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[AG]EQ{I|L}KQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 7.9171;7.7175;7.1958;7.1958;7.1958;7.0744;6.9963;6.9963;6.9963;6.8765 -;-;-;-;-;-;-;-;-;- 6521 1 1.822 135032.0 1.0 3002 4415 7411 HBL1_DMSO_200M_050219_2,7419 HBL1_DMSO_200M_050219_2,7419,SRPDSILGMQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7420 40.095 275.0 343920.0 25 0 32986.0 -1 MNPVFTCDVFK 11 88 679.3166637581935 1356.618774583187 2 679.3177978396416 MULTI CID FTMS 0 0 0 7411 356276.5625 1.0 0 0.0 9 Carbamidomethyl (C) _MNPVFTC(Carbamidomethyl (C))DVFK_ ENST00000510241.5_2_5:139943603-139943852:-|nuORF 20.41453444215458 0.6105011870913812 4 [MN]PN{I|L}NEAQ 9 -1 85.768 0.0 0.0 6.3222 0.0 0.0 0.0 342.15412317447505 342.15412317447505 56.058417828259294 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 1.5356668758921828 [MN]PN{I|L}NEAQ 6.3222 - 769 + 1 1.822 69038.9 1.0 3003 4415 7411 HBL1_DMSO_200M_050219_2,7420 HBL1_DMSO_200M_050219_2,7420,MNPVFTCDVFK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7421 40.106 637.0 371650.0 25 0 42712.0 + 29214 QGLEMPGYDC 10 161 556.7240973084029 1111.4336416836056 2 556.7247802615166 MULTI CID FTMS 0 0 0 7411 337066.34375 0.7928792376214188 -1 0.1025009155273437 10 Unmodified _QGLEMPGYDC_ REV__ENST00000475441.5_1_1:28905145-28906492:-|nuORF;REV__nc|ENSG00000197989|Q9BXW3|SNHG12 27.628801355627647 0.3479284626772844 4 {[QG]|[NA]}{I|L}ET{M(Oxidation (M))|F}[EC]W 9 -1 + 69.064 0.0 0.0 6.2139 6.2139 90.086 0.0 0.0 0.0 45.655058256571 2.6141721588886497 2.6141721588886497 20.25484055221854 0 1.8129529932484496 2.0 0.8494850021680094 0.0 {[QG]|[NA]}{I|L}ET{M(Oxidation (M))|F}[EC]W;{[QG]|[NA]}{I|L}[C(Carbamidomethyl (C))D]WNGY;{[QG]|[NA]}{I|L}[C(Carbamidomethyl (C))D]YHGY;{[QG]|[NA]}{I|L}[C(Carbamidomethyl (C))D]WGGGY;{[QG]|[NA]}{I|L}[C(Carbamidomethyl (C))D]WGNY;{[QG]|[NA]}{I|L}E{[QG]|[NA]}{[{M(Oxidation (M))|F}C]|[YS]}{[QC]|[C(Carbamidomethyl (C))A]};{[QG]|[NA]}{I|L}[C(Carbamidomethyl (C))D]YGHY;{[QG]|[NA]}{I|L}[C(Carbamidomethyl (C))D]YGNW;{[QG]|[NA]}{I|L}[C(Carbamidomethyl (C))D]YNGW;{[QG]|[NA]}{I|L}EEH{[CP]|[EA]}{[CP]|[EA]} 6.2139;4.3915;3.9865;3.7869;3.4918;3.3672;3.0867;2.9841;2.9841;2.6616 -;-;-;-;-;-;-;-;-;- 2193 + 1 1.822 182451.8 1.0 3004 4415 7411 HBL1_DMSO_200M_050219_2,7421 HBL1_DMSO_200M_050219_2,7421,QGLEMPGYDC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7422 40.111 245.0 250550.0 25 0 26120.0 8630 EVEEDEYKAFY 11 83 711.3074425199937 1420.6003321067874 2 711.8097411990166 MULTI CID FTMS 0 0 0 7411 319225.84375 0.6728068449708987 -2 0.1384506225585937 11 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 4 [QA]HDEAGAQNA{M(Oxidation (M))|F}Y 13 9 + 74.36 0.0 0.0 5.2344 5.2344 72.38 0.0 0.0 0.0 5.427385130620152 56.607925955536544 5.427385130620152 1.870866433571436 0 0.8935078169319297 0.0 0.0 1.274227503252014 [QA]HDEAGAQNA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAGANQA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEQAQNA{M(Oxidation (M))|F}Y;[QA]HDEAGAQGGA{M(Oxidation (M))|F}Y;[QA]HDEAGA[AG]NA{M(Oxidation (M))|F}Y;[QA]HDEQANQA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y 5.2344;5.1027;5.0225;4.8908;4.7669;4.5958;4.5958;4.555;4.4623;4.4623 -;-;-;-;-;-;-;-;-;- 1578 1 1.822 49916.9 1.0 3005 4415 7411 HBL1_DMSO_200M_050219_2,7422 HBL1_DMSO_200M_050219_2,7422,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7423 40.123 673.0 172210.0 25 0 12027.0 + -1 IPTSCFCSR 9 139 564.2511946703271 1126.487836407454 2 564.2517578005791 MULTI CID FTMS 0 0 0 7411 303556.90625 0.1073079662377332 8 -0.5762214660644531 12 2 Carbamidomethyl (C) _IPTSC(Carbamidomethyl (C))FC(Carbamidomethyl (C))SR_ REV__ENST00000484704.5_1_6:29693915-29694026:+|nuORF 8.593279151180031 0.6146971463335029 4 SVT{I|L} 4 -1 27.779 0.0 0.0 2.466 0.0 0.0 407.1873125810853 316.04364954166255 723.2309621227479 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.0 SVT{I|L} 2.466 - 265 + 1 1.822 90598.7 1.0 3006 4415 7411 HBL1_DMSO_200M_050219_2,7423 HBL1_DMSO_200M_050219_2,7423,IPTSCFCSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7424 40.127 235.0 767640.0 25 0 218930.0 + 33293 SFQRNVRSL 9 116 553.8068695426309 1105.5991861520615 2 553.8072997927666 MULTI CID FTMS 0 0 0 7411 274988.0 0.3958743771004751 -1 0.1025009155273437 13 Unmodified _SFQRNVRSL_ ENST00000376007.8_1_6:31588511-31590634:+|nuORF 63.22749603027936 0.0242951379232427 4 {[MS]|[{M(Oxidation (M))|F}A]}R[SG]NVRS{I|L} 10 4 + 47.813 0.0 0.0 4.3246 4.3246 76.495 0.0 0.0 0.0 15.586577407565052 2.230749808046326 2.230749808046326 7.435012637084171 0 1.0451140161145327 0.0 0.2302046884880938 1.1237125054200234 {[MS]|[{M(Oxidation (M))|F}A]}R[SG]NVRS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}R[SG]NVRTV;{[MS]|[{M(Oxidation (M))|F}A]}R[SG]GGVRS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}R[SG]GGVRTV;[QP][RH]NV[VG]S{I|L} 4.3246;3.6521;3.4957;2.8232;2.4353 -;-;-;-;- 312 + 1 1.822 141912.7 1.0 3007 4415 7411 HBL1_DMSO_200M_050219_2,7424 HBL1_DMSO_200M_050219_2,7424,SFQRNVRSL True True SFQRNVRSL 40.127115 553.807299792767 10023194.0 7411.0 ENST00000376007.8_1_6:31588511-31590634:+|nuORF 6.344528039296468 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7425 40.133 257.0 811580.0 25 0 51122.0 + 41733 VPSVSTATL 9 127 437.7477001688821 873.4808474045642 2 437.7488891482353 MULTI CID FTMS 0 0 0 7411 257508.984375 0.7932907942778004 1 -0.1240997314453125 14 Unmodified _VPSVSTATL_ REV__ENST00000608290.1_1_22:46409584-46410459:+|nuORF 48.345845343767074 0.0439967357579942 4 VPHTRVD 7 -1 67.189 0.0 0.0 7.6921 0.0 0.0 0.0 66.03574548892811 66.03574548892811 45.7339304838933 0.0 0.0 0.0 0 1.3807196863200843 2.0 1.1989700043360187 0.0 VPHTRVD 7.6921 - 963 + 1 1.822 164127.9 1.0 3008 4415 7411 HBL1_DMSO_200M_050219_2,7425 HBL1_DMSO_200M_050219_2,7425,VPSVSTATL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7426 40.137 180.0 369100.0 25 0 25224.0 + 19766 LGQWGVLTI 9 103 493.7856029029535 985.556652872707 2 493.7858154177666 MULTI CID FTMS 0 0 0 7411 241335.03125 1.0 0 0.0 15 Unmodified _LGQWGVLTI_ REV__ENST00000484115.5_1_3:49043105-49043375:+|nuORF 25.399314129420983 0.2080152500878129 4 {I|L}GQAE[RV]T{I|L} 9 -1 + 33.765 0.0 0.0 3.4259 3.4259 66.203 0.0 0.0 0.0 15.85979084976366 9.841736652060792 9.841736652060792 2.0411998265592537 0 0.242992819099939 1.0 0.3252574989159953 0.0 {I|L}GQAE[RV]T{I|L};{I|L}GQAVVWT{I|L};{I|L}GQAE[R{I|L}]S{I|L};{I|L}GQAE[R{I|L}]TV;[{I|L}T][QT][W{I|L}]PK;{[VA]|[{I|L}G]}[WH]{M(Oxidation (M))|F}[KA]K;{[VA]|[{I|L}G]}{[HG]|PP}E{M(Oxidation (M))|F}[KA]K;{I|L}QQE[RV]T{I|L};{I|L}QQVVWT{I|L};{[VA]|[{I|L}G]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[W{I|L}]PK 3.4259;3.2188;2.7328;2.4273;1.8167;1.6628;1.5305;1.5074;1.3003;0.9004 -;-;-;-;-;-;-;-;-;- 350 + 1 1.822 55090.3 1.0 3009 4415 7411 HBL1_DMSO_200M_050219_2,7426 HBL1_DMSO_200M_050219_2,7426,LGQWGVLTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7427 40.144 439.0 306620.0 25 0 33470.0 + 5823 DPRVGIRSV 9 190 333.5301962555001 997.5687593667004 3 333.5299865603447 MULTI CID FTMS 0 0 0 7411 226502.875 0.747111447966688 1 -0.1240997314453125 16 Unmodified _DPRVGIRSV_ ENSG00000137802|ENST00000457542|MAPKBP1;nc|ENSG00000137802|O60336-2|MAPKBP1;nc|ENSG00000137802|O60336-3|MAPKBP1;nc|ENSG00000137802|O60336|MAPKBP1 8.444304893310646 0.6198977621250997 4 DPRVG{I|L} 6 3 37.038 0.0 0.0 3.7128 0.0 0.0 0.0 357.1897766132802 357.1897766132802 28.11197534870789 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 + DPRVG{I|L} 3.7128 + + 178 + 1 1.822 107965.6 1.0 3010 4415 7411 HBL1_DMSO_200M_050219_2,7427 HBL1_DMSO_200M_050219_2,7427,DPRVGIRSV False True DPRVGIRSV 40.144331 333.529986560345 1794747.375 7411.0 nc|ENSG00000137802|O60336-2|MAPKBP1;;ENSG00000137802|ENST00000457542|MAPKBP1;;nc|ENSG00000137802|O60336-3|MAPKBP1;;nc|ENSG00000137802|O60336|MAPKBP1 2.6071251233418784 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7428 40.149 248.0 313200.0 25 0 25890.0 -1 0 110 351.7052464484772 0 351.7050353884697 PEAK CID FTMS 0 0 0 7411 225815.09375 1.0 0 0.0 17 4 {I|L}EK 3 -1 16.343 0.0 0.0 2.3301 0.0 0.0 200.0786941817013 128.0719393365844 328.15063351828576 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3054621874040891 0.2614393726401688 {I|L}EK 2.3301 - 24 + 1 1.822 65141.4 1.0 3011 4415 7411 HBL1_DMSO_200M_050219_2,7428 HBL1_DMSO_200M_050219_2,7428, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7429 40.163 800.0 266750.0 25 0 20225.0 + 35673 SVDQTVTQV 9 171 488.7510213540617 0 488.7507507205009 PEAK CID FTMS 0 0 0 7411 133692.296875 1.0 0 0.0 18 Unmodified _SVDQTVTQV_ ENSG00000100150|ENST00000651528|DEPDC5;nc|ENSG00000100150|O75140-1|DEPDC5;nc|ENSG00000100150|O75140-2|DEPDC5;nc|ENSG00000100150|O75140-4|DEPDC5;nc|ENSG00000100150|O75140-5|DEPDC5;nc|ENSG00000100150|O75140-6|DEPDC5;nc|ENSG00000100150|O75140-8|DEPDC5;nc|ENSG00000100150|O75140-9|DEPDC5 34.40172386719151 0.0892392376003579 4 PPP 3 9 13.812 0.0 0.0 1.4159 0.0 0.0 112.94769176982363 568.3597506158811 681.3074423857048 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPP 1.4159 - 231 + 1 1.822 161944.9 0.6899999976158142 3012 4415 7411 HBL1_DMSO_200M_050219_2,7429 HBL1_DMSO_200M_050219_2,7429,SVDQTVTQV True True SVDQTVTQV 40.162773 488.750750720501 992423.25 7411.0 nc|ENSG00000100150|O75140-5|DEPDC5;;ENSG00000100150|ENST00000651528|DEPDC5;;nc|ENSG00000100150|O75140-6|DEPDC5;;nc|ENSG00000100150|O75140-8|DEPDC5;;nc|ENSG00000100150|O75140-1|DEPDC5;;nc|ENSG00000100150|O75140-9|DEPDC5;;nc|ENSG00000100150|O75140-4|DEPDC5;;nc|ENSG00000100150|O75140-2|DEPDC5 3.951768527428309 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7430 40.178 800.0 203490.0 25 0 21068.0 + 24947 MPPPPPQGV 9 163 468.2364995746263 0 468.2369262576103 PEAK CID FTMS 0 0 0 7411 123472.5546875 0.154541391918583 -44 1.8045539855957031 19 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0325740255581346 4 QPPPP 5 5 24.029 0.0 0.0 2.5714 0.0 0.0 174.0981689717151 241.06545435123283 415.163623322948 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 QPPPP 2.5714 - 142 + 1 1.822 127206.9 0.6499999761581421 3013 4415 7411 HBL1_DMSO_200M_050219_2,7430 HBL1_DMSO_200M_050219_2,7430,MPPPPPQGV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7431 40.187 524.0 231100.0 25 0 17477.0 39415 VALGAAEK 8 149 379.7245066483627 757.4344603635254 2 379.7238952517509 MULTI CID FTMS 0 0 0 7411 112520.3203125 0.6301044997086293 -1 0.1025009155273437 20 Unmodified _VALGAAEK_ ENSG00000145901|ENST00000521591|TNIP1;nc|ENSG00000145901|Q15025-2|TNIP1;nc|ENSG00000145901|Q15025-3|TNIP1;nc|ENSG00000145901|Q15025-4|TNIP1;nc|ENSG00000145901|Q15025-5|TNIP1;nc|ENSG00000145901|Q15025-6|TNIP1;nc|ENSG00000145901|Q15025-7|TNIP1;nc|ENSG00000145901|Q15025-8|TNIP1 28.486842064014134 0.4448922141344407 4 K{M(Oxidation (M))|F}AADV 6 6 39.083 0.0 0.0 5.1599 0.0 0.0 0.0 123.09337793521718 123.09337793521718 14.35071500685646 0.0 0.0 0.0 0 1.416386562212267 0.0 0.5 0.0 K{M(Oxidation (M))|F}AADV 5.1599 - 281 + 1 1.822 96878.1 1.0 3014 4415 7411 HBL1_DMSO_200M_050219_2,7431 HBL1_DMSO_200M_050219_2,7431,VALGAAEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7433 40.191 4.0 12393000.0 25 0 1342100.0 + 41296 VPHTRPVSL 9 78 335.8664553650867 1004.57753669546 3 335.8663207888603 MULTI CID FTMS 0 0 0 7432 12154266.0 0.4218293178634039 2 -0.171417236328125 1 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 34.40172386719151 0.1061884637610825 4 DP{I|L}V 4 7 40.433 0.0 0.0 4.0249 0.0 0.0 562.3346981996394 0.0 562.3346981996394 0.0 22.11758134947864 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 DP{I|L}V 4.0249 - 147 1 1.82 46024.0 1.0 3015 4416 7432 HBL1_DMSO_200M_050219_2,7433 HBL1_DMSO_200M_050219_2,7433,VPHTRPVSL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7434 40.193 5.4 9541300.0 25 0 528910.0 41713 VPSPHLRSL 9 77 503.2960277940775 1004.577502654955 2 503.2959472537041 MULTI CID FTMS 0 0 0 7432 5105510.0 0.3879934224775385 2 -0.171417236328125 2 Unmodified _VPSPHLRSL_ ENST00000314400.9_1_3:112738493-112738592:-|nuORF 24.020572477871973 0.2255576514309169 4 VPH 3 6 42.095 0.0 0.0 4.1904 0.0 0.0 0.0 668.3763870210117 668.3763870210117 24.15853297939611 0.0 0.0 0.0 0 0.2887254899964357 1.3010299956639813 0.0 0.0 VPH 4.1904 - 27 + 1 1.82 43390.5 1.0 3016 4416 7432 HBL1_DMSO_200M_050219_2,7434 HBL1_DMSO_200M_050219_2,7434,VPSPHLRSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7435 40.194 17.0 2583800.0 25 0 254060.0 + 24975 MPPPPPQGV 9 79 460.23852327962805 918.462493626056 2 460.2390930056572 MULTI CID FTMS 0 0 0 7432 2845063.75 0.1535212976484086 -42 1.8043632507324217 3 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 56.541270873467816 0.0279970378729908 4 {NN|[MP]|[D{I|L}]|[EV]}PPP[QP]GV 9 0 + 30.128 0.0 0.0 3.2803 3.2803 77.086 0.0 0.0 0.0 3.389399919613968 5.519243580975374 3.389399919613968 10.642040441009044 0 1.6989700043360187 0.0 0.0 0.3807196863200844 + + {NN|[MP]|[D{I|L}]|[EV]}PPP[QP]GV;{NN|[MP]|[D{I|L}]|[EV]}[YK][QP]GV 3.2803;2.1216 +;- + 170 + 1 1.82 40126.8 1.0 3017 4416 7432 HBL1_DMSO_200M_050219_2,7435 HBL1_DMSO_200M_050219_2,7435,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7436 40.195 33.0 2033400.0 25 0 276280.0 + 22846 LRTVPGSLIN 10 87 357.2173139370643 1068.630112411393 3 357.2170287966728 MULTI CID FTMS 0 0 0 7432 1508638.5 0.2819941972660382 1 -0.0796089172363281 4 Unmodified _LRTVPGSLIN_ REV__ENST00000422972.1_1_22:29214364-29218101:+|nuORF;REV__ENST00000451486.5_1_22:29197956-29218101:+|nuORF;REV__ENST00000458080.1_1_22:29196681-29218101:+|nuORF 16.149105407346934 0.5765757077271437 4 QKS[H{I|L}]VQ 7 -1 27.594 0.0 0.0 2.5822 0.0 0.0 230.16392469361807 0.0 230.16392469361807 0.0 8.129877237720144 0.0 0.0 0 0.0 0.0 0.805462187404089 0.4247425010840047 QKS[H{I|L}]VQ 2.5822 - 107 + 1 1.82 61962.9 1.0 3018 4416 7432 HBL1_DMSO_200M_050219_2,7436 HBL1_DMSO_200M_050219_2,7436,LRTVPGSLIN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7437 40.196 38.0 1201800.0 25 0 172370.0 + 45853 YYQDTPKQI 9 78 578.287769165863 1154.560985398526 2 578.2879516482353 MULTI CID FTMS 0 0 0 7432 1365533.25 0.2478368570804748 2 -0.171417236328125 5 Unmodified _YYQDTPKQI_ ENSG00000048162|ENST00000614830|NOP16 57.72198328787511 0.0273433238377839 4 YYQDT[KP]Q{I|L} 9 0 + 69.063 0.0 0.0 5.9818 5.9818 85.604 0.0 0.0 0.0 48.36365002801443 8.657424843733637 8.657424843733637 9.208187539523747 0 0.6747425010840047 2.0 0.3252574989159953 1.274227503252014 + + YYQDT[KP]Q{I|L};YY[AG]DT[KP]Q{I|L};YYQDT[KP][AG]{I|L} 5.9818;5.1842;4.8815 +;-;- + 289 + 1 1.82 40052.7 1.0 3019 4416 7432 HBL1_DMSO_200M_050219_2,7437 HBL1_DMSO_200M_050219_2,7437,YYQDTPKQI True True YYQDTPKQI 40.196137 578.287951648235 129472224.0 7432.0 ENSG00000048162|ENST00000614830|NOP16 7.22313912709554 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7438 40.197 35.0 1720400.0 25 0 96750.0 40274 VGTVTRLPVQ 10 89 535.3209181080251 1068.6272832828502 2 535.3217651247978 MULTI CID FTMS 0 0 0 7432 1352204.5 0.2429281239119741 2 -0.171417236328125 6 Unmodified _VGTVTRLPVQ_ ENST00000347708.4_1_8:145194626-145194866:+|nuORF 20.41453444215458 0.5050059513928961 4 DPDKQV 6 9 43.109 0.0 0.0 4.0341 0.0 0.0 0.0 383.2417696588501 383.2417696588501 21.682437647924218 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 DPDKQV 4.0341 - 104 + 1 1.82 49395.1 1.0 3020 4416 7432 HBL1_DMSO_200M_050219_2,7438 HBL1_DMSO_200M_050219_2,7438,VGTVTRLPVQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7439 40.198 42.0 983740.0 25 0 141610.0 6703 ECLFLAVM 8 54 463.23147654016384 924.4484001471276 2 463.2316161990166 MULTI CID FTMS 0 0 0 7432 1201242.375 0.058950310008214 5 -0.3396568298339844 7 Unmodified _ECLFLAVM_ ENSG00000176198|ENST00000641082|OR11H4;nc|ENSG00000176198|Q8NGC9|OR11H4 19.438996006549623 0.6237395211498085 4 [{M(Oxidation (M))|F}E]W[{I|L}T]VM 7 4 + 35.986 0.0 0.0 3.8927 3.8927 79.252 0.0 0.0 0.0 20.501444527144272 2.1737132828989303 2.1737132828989303 12.055460378246464 0 1.0 0.0 0.0 0.0 [{M(Oxidation (M))|F}E]W[{I|L}T]VM;[YR]AA{[QS]|[NT]}VM;{[CT]|[{M(Oxidation (M))|F}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[NV]|[RG]}VM;[{M(Oxidation (M))|F}T]{[QS]|[NT]}{[NV]|[RG]}VM;[{M(Oxidation (M))|F}T]{[NV]|[RG]}{[QS]|[NT]}VM;[{M(Oxidation (M))|F}T]AAA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}W;{[CT]|[{M(Oxidation (M))|F}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RRM;[{M(Oxidation (M))|F}E][KG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}W 3.8927;2.5886;2.1768;2.152;2.152;1.1198;0.94257;0.076073 -;-;-;-;-;-;-;- 125 + 1 1.82 36274.4 1.0 3021 4416 7432 HBL1_DMSO_200M_050219_2,7439 HBL1_DMSO_200M_050219_2,7439,ECLFLAVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7440 40.2 59.0 881120.0 25 0 98507.0 + 21040 LPAASQPQV 9 87 455.75335734232647 909.492161751453 2 455.7534362673759 MULTI CID FTMS 0 0 0 7432 713937.8125 0.8729702380938734 -1 0.1240997314453125 8 Unmodified _LPAASQPQV_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 63.562846038646086 0.0241094678104353 4 [WR]{I|L}NT 5 9 35.234 0.0 0.0 3.874 0.0 0.0 0.0 236.10471521549064 236.10471521549064 3.974315640635595 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.7742275032520141 0.3054621874040891 [WR]{I|L}NT 3.874 - 198 + 1 1.82 48575.3 1.0 3022 4416 7432 HBL1_DMSO_200M_050219_2,7440 HBL1_DMSO_200M_050219_2,7440,LPAASQPQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7441 40.202 75.0 625580.0 25 0 110900.0 + 30310 QYYNGKIHAY 10 78 419.5401485448502 1255.5986162347506 3 419.5400573611259 MULTI CID FTMS 0 0 0 7432 486963.0625 1.0 0 0.0 9 Unmodified _QYYNGKIHAY_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000493271.1_1_2:96945134-96947649:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 17.44264345198275 0.5548713957087773 4 [YQ]YN[KG]{I|L}HAY 10 0 + 28.594 0.0 0.0 2.2773 2.2773 70.587 0.0 0.0 0.0 5.764837301042718 6.653280873937462 5.764837301042718 6.532125137753436 0 0.0 0.0 0.0 0.0 + + [YQ]YN[KG]{I|L}HAY;[YQ]Y[W{I|L}]{I|L}HAY;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KT][KG]NY{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]YGG[KG]{I|L}HAY;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KT]T[TP]Y{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KT][W{I|L}]Y{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{M(Oxidation (M))|F}V][KQ][KG]NY{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{M(Oxidation (M))|F}V][KQ]T[TP]Y{[WS]|[C(Carbamidomethyl (C)){I|L}]};[RN]{[DS]|[MA]|[CV]|TT}Y[W{I|L}][R{M(Oxidation (M))|F}];[YN][KP][KG]NY{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.2773;1.7571;1.7474;1.5474;1.3674;1.2272;0.86932;0.8276;0.41255;0.38982 +;-;-;-;-;-;-;-;-;- + 247 + 1 1.82 45323.8 1.0 3023 4416 7432 HBL1_DMSO_200M_050219_2,7441 HBL1_DMSO_200M_050219_2,7441,QYYNGKIHAY False True QYYNGKIHAY 40.201693 419.540057361126 3643462.75 7432.0 ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENST00000493271.1_1_2:96945134-96947649:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 5.498622576395671 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7442 40.204 136.0 510990.0 25 0 55633.0 + 41510 VPNATIRNV 9 86 492.2802795309003 982.5460061286008 2 492.2850219607353 MULTI CID FTMS 0 0 0 7432 473667.90625 0.0474685965239649 -12 0.4568901062011719 10 Unmodified _VPNLNQSLV_ ENST00000467443.5_1_22:21831964-21846319:-|nuORF;nc|ENSG00000183506|A4QPH2|PI4KAP2;ENSG00000241973|ENST00000255882|PI4KA;nc|ENSG00000241973|P42356-2|PI4KA;ENST00000360806.9_2_22:21827645-21842641:-|nuORF;ENST00000450651.5_1_22:21841260-21846319:-|nuORF;nc|ENSG00000290425|Q8N8J0|PI4KAP1;nc|ENSG00000183506|A4QPH2-2|PI4KAP2;nc|ENSG00000183506|A4QPH2-4|PI4KAP2;ENST00000462560.6_1_22:21830876-21842641:-|nuORF 24.020572477871973 0.2255576514309169 4 VPNAT{I|L} 6 5 60.878 0.0 0.0 6.196 0.0 0.0 0.0 384.2002352350219 384.2002352350219 34.59183145787911 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.4247425010840047 VPNAT{I|L} 6.196 - 100 + 1 1.82 57996.8 1.0 3024 4416 7432 HBL1_DMSO_200M_050219_2,7442 HBL1_DMSO_200M_050219_2,7442,VPNLNQSLV False False VPNATIRNV 40.204441 492.285021960735 17053098.0 7432.0 ENST00000467443.5_1_22:21831964-21846319:-|nuORF;;nc|ENSG00000183506|A4QPH2|PI4KAP2;;ENSG00000241973|ENST00000255882|PI4KA;;nc|ENSG00000241973|P42356-2|PI4KA;;ENST00000360806.9_2_22:21827645-21842641:-|nuORF;;ENST00000450651.5_1_22:21841260-21846319:-|nuORF;;nc|ENSG00000290425|Q8N8J0|PI4KAP1;;nc|ENSG00000183506|A4QPH2-2|PI4KAP2;;nc|ENSG00000183506|A4QPH2-4|PI4KAP2;;ENST00000462560.6_1_22:21830876-21842641:-|nuORF 6.84290885925293 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7443 40.208 208.0 472860.0 25 0 177360.0 -1 0 107 386.1578414950247 385.1505650284247 1 386.1575500369072 MULTI CID FTMS 0 0 0 7432 406113.4375 0.2621323154768729 2 -0.171417236328125 11 4 W 1 -1 10.278 0.0 0.0 2.6685 0.0 0.0 181.0611465487356 0.0 181.0611465487356 0.0 1.1288952162239418 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.6685 - 9 + 1 1.82 85694.1 1.0 3025 4416 7432 HBL1_DMSO_200M_050219_2,7443 HBL1_DMSO_200M_050219_2,7443, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7444 40.211 143.0 550730.0 25 0 42648.0 + + 43049 VYNVTQHAV 9 116 515.7687928705482 1029.5230328078962 2 515.7688476443291 MULTI CID FTMS 0 0 0 7432 276880.4375 0.3375548191976075 -2 0.2266006469726562 12 Unmodified _VYGGRHWR_ ENST00000483765.5_1_13:27827977-27830662:+|nuORF;ENST00000397467.2_1_3:1947466-1947595:+|nuORF;ENSG00000122026|ENST00000311549|RPL21;ENST00000488408.1_1_3:153741662-153741884:+|nuORF 32.116972079565 0.368454113111938 4 VYNVTQ 6 -1 67.256 0.0 0.0 6.5327 0.0 0.0 0.0 322.1521665973477 322.1521665973477 54.48065234703047 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.3494850021680094 0.3807196863200844 VYNVTQ 6.5327 - 625 + 1 1.82 65937.4 1.0 3026 4416 7432 HBL1_DMSO_200M_050219_2,7444 HBL1_DMSO_200M_050219_2,7444,VYGGRHWR False False VYNVTQHAV 40.211264 515.768847644329 13806759.0 7432.0 ENST00000483765.5_1_13:27827977-27830662:+|nuORF;;ENST00000397467.2_1_3:1947466-1947595:+|nuORF;;ENSG00000122026|ENST00000311549|RPL21;;ENST00000488408.1_1_3:153741662-153741884:+|nuORF 7.647034645080566 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7445 40.215 180.0 262060.0 25 0 24328.0 -1 SQAPSTMQV 9 88 482.7233625623836 963.4321721915672 2 482.7236511111259 MULTI CID FTMS 0 0 0 7432 245752.65625 0.2839398510400628 -2 0.2266006469726562 13 Oxidation (M) _SQAPSTM(Oxidation (M))QV_ ENSG00000112658|ENST00000265354|SRF 18.1463463914782 0.3454829746528889 4 [PA]ENAA 6 -1 18.86 0.0 0.0 1.9576 0.0 0.0 0.0 407.1620055258048 407.1620055258048 0.9028874993307312 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.3252574989159953 0.0 [PA]ENAA 1.9576 - 165 1 1.82 43445.1 1.0 3027 4416 7432 HBL1_DMSO_200M_050219_2,7445 HBL1_DMSO_200M_050219_2,7445,SQAPSTMQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7446 40.22 268.0 300850.0 25 0 46016.0 + 11527 GIPEKDLHSV 10 111 365.53319332565394 1093.577750577162 3 365.5329162478447 MULTI CID FTMS 0 0 0 7432 199535.625 0.3919771014269618 -5 0.2956008911132812 14 Unmodified _GIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 38.17557092003332 0.1768326257063233 4 {[VA]|[{I|L}G]}P{M(Oxidation (M))|F}VSV 7 5 53.505 0.0 0.0 4.8926 0.0 0.0 0.0 391.1681307428344 391.1681307428344 26.391529223888664 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.805462187404089 0.0 {[VA]|[{I|L}G]}P{M(Oxidation (M))|F}VSV 4.8926 - 896 + 1 1.82 76251.4 1.0 3028 4416 7432 HBL1_DMSO_200M_050219_2,7446 HBL1_DMSO_200M_050219_2,7446,GIPEKDLHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7447 40.234 800.0 217520.0 25 0 12127.0 + 36283 SYHHGEMSL 9 169 530.7292536314206 1059.4439543296412 2 530.7297241091728 MULTI CID FTMS 0 0 0 7432 175832.65625 0.8997722842417177 -1 0.1240997314453125 15 Unmodified _SYHHGEMSL_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 103.74828524460852 0.0090107942103208 4 {[{M(Oxidation (M))|F}C]|[YS]}HHGEMS{I|L} 9 0 + 69.355 0.0 0.0 6.5464 6.5464 80.38 0.0 0.0 0.0 3.252574989159953 11.117646881713767 3.252574989159953 3.252574989159953 0 1.41944517631652 0.0 1.610924374808178 0.0 + + {[{M(Oxidation (M))|F}C]|[YS]}HHGEMS{I|L};{[WN]|[YH]}SHGEMS{I|L};{[{M(Oxidation (M))|F}C]|[YS]}HHWMS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}MEG{M(Oxidation (M))|F}MD{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}C(Carbamidomethyl (C))HGEMS{I|L};{[DA]|[EG]}HMHSYS{I|L};{[DA]|[EG]}HHMSYS{I|L};{[DA]|[EG]}HMQQMS{I|L};HH{[DA]|[EG]}MSYS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[CG]HGEMS{I|L} 6.5464;6.2393;5.9349;5.497;5.4825;5.323;5.2719;5.0537;4.8068;4.6134 +;-;-;-;-;-;-;-;-;- + 1340 1 1.82 131375.1 0.8399999737739563 3029 4416 7432 HBL1_DMSO_200M_050219_2,7447 HBL1_DMSO_200M_050219_2,7447,SYHHGEMSL True True SYHHGEMSL 40.233518 530.729724109173 1627332.125 7432.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 7.639610449473063 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7448 40.247 800.0 246700.0 25 0 22104.0 + 45470 YTIPPGHQV 9 168 506.2664900810326 1010.5184272288652 2 506.2654907107353 MULTI CID FTMS 0 0 0 7432 173997.625 0.863190499813965 -9 0.3820419311523437 16 Unmodified _YTIPPGHQV_ ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;ENST00000492267.1_1_3:82855892-82856129:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1 37.97399986684836 0.0865783450051559 4 [YT]{I|L}Q 4 5 36.471 0.0 0.0 3.6091 0.0 0.0 0.0 502.2482978149982 502.2482978149982 19.67352101606476 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.3807196863200844 [YT]{I|L}Q 3.6091 - 683 + 1 1.82 152891.7 0.7799999713897705 3030 4416 7432 HBL1_DMSO_200M_050219_2,7448 HBL1_DMSO_200M_050219_2,7448,YTIPPGHQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7449 40.253 298.0 121060.0 25 0 11441.0 6347 DVNIGHEV 8 71 441.7193696553679 0 441.7197143435478 PEAK CID FTMS 0 0 0 7432 117779.765625 0.6555414255135799 1 -0.0796089172363281 17 Unmodified _DVNIGHEV_ ENSG00000089876|ENST00000284690|DHX32;nc|ENSG00000089876|Q7L7V1-2|DHX32 13.50788311687929 0.5021269579892848 4 T 1 8 4.6041 0.0 0.0 0.52235 0.0 0.0 663.2972007591749 114.05670343570546 777.3539041948803 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.52235 - 21 + 1 1.82 35432.6 1.0 3031 4416 7432 HBL1_DMSO_200M_050219_2,7449 HBL1_DMSO_200M_050219_2,7449,DVNIGHEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7450 40.267 800.0 226720.0 25 0 14497.0 27777 PLPPKGRVL 9 176 488.8188640373592 975.6231751415183 2 488.8193542361259 MULTI CID FTMS 0 0 0 7432 105359.9140625 0.3196011172852842 21 -0.996185302734375 18 Unmodified _PLPPKGRVL_ ENSG00000171204|ENST00000358867|TMEM126B;nc|ENSG00000171204|Q8IUX1-2|TMEM126B;nc|ENSG00000171204|Q8IUX1-5|TMEM126B 18.13498045792455 0.3457906370836843 4 {I|L}PP 3 6 46.995 0.0 0.0 4.8169 0.0 0.0 0.0 665.4119804454735 665.4119804454735 10.965611671789084 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}PP 4.8169 + + 1463 + 1 1.82 139151.9 0.6600000262260437 3032 4416 7432 HBL1_DMSO_200M_050219_2,7450 HBL1_DMSO_200M_050219_2,7450,PLPPKGRVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7452 40.271 131.0 463610.0 25 0 82641.0 + 36237 SYAALGGK 8 77 383.7083514172677 0 383.7083312869072 PEAK CID FTMS 0 0 0 7451 377600.9375 0.5712673544626842 2 -0.1653022766113281 1 Unmodified _SYAALGGK_ REV__ENSG00000015520|ENST00000381160|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-2|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9-4|NPC1L1;REV__nc|ENSG00000015520|Q9UHC9|NPC1L1 2.577480529830294 0.5910327097116076 4 {I|L}R 2 -1 12.449 0.0 0.0 1.6264 0.0 0.0 278.08967863062355 215.10482202701408 493.1945006576376 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.2742275032520141 {I|L}R 1.6264 - 7 + 1 1.82 55034.0 1.0 3033 4417 7451 HBL1_DMSO_200M_050219_2,7452 HBL1_DMSO_200M_050219_2,7452,SYAALGGK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7453 40.275 189.0 383500.0 25 0 25232.0 + 41546 VPPAPTATV 9 117 426.7446367001476 851.4747204670953 2 426.7449523806572 MULTI CID FTMS 0 0 0 7451 381951.96875 1.0 0 0.0 2 Unmodified _VPPAPTATV_ ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4 53.57557251787612 0.0325303259649373 4 [TP]APPAVTV 9 4 + 44.133 0.0 0.0 5.1831 5.1831 77.694 0.0 0.0 0.0 4.989919302670458 28.17410004652736 4.989919302670458 5.331683632526541 0 0.5 0.4559319556497244 0.5242275032520141 0.0 [TP]APPAVTV;[PA]PTPAVTV;[TA]PPPAVTV;{[HG]|PP}ATPAVTV;[PA]TPPAVTV;[VP][PA][Q{I|L}]EV;[TA][YK]AVTV;[PA]PV[Q{I|L}]EV;{[HG]|PP}AV[Q{I|L}]EV;[TP]A{[TV]|[{I|L}S]}[PA]PV 5.1831;4.557;4.4492;4.3811;4.3502;3.3963;3.2996;2.158;1.9821;1.3376 -;-;-;-;-;-;-;-;-;- 196 1 1.82 58679.1 1.0 3034 4417 7451 HBL1_DMSO_200M_050219_2,7453 HBL1_DMSO_200M_050219_2,7453,VPPAPTATV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7454 40.276 6.9 6991300.0 25 0 619100.0 + 44777 YPLSKAQTV 9 75 503.7820742905152 1005.5495956478304 2 503.7813293337822 MULTI CID FTMS 0 0 0 7451 6197031.0 1.0 0 0.0 3 Unmodified _YPLSKAQTV_ ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3 41.8396318013385 0.0653578398400075 4 YP{I|L}S{M(Oxidation (M))|F} 5 5 59.725 0.0 0.0 5.9395 0.0 0.0 0.0 395.2185019759646 395.2185019759646 40.7723722827955 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.805462187404089 0.0 YP{I|L}S{M(Oxidation (M))|F} 5.9395 - 106 + 1 1.82 40499.5 1.0 3035 4417 7451 HBL1_DMSO_200M_050219_2,7454 HBL1_DMSO_200M_050219_2,7454,YPLSKAQTV True True YPLSKAQTV 40.276251 503.781329333782 391277056.0 7451.0 nc|ENSG00000144218|P51826-2|AFF3;;ENSG00000144218|ENST00000672756|AFF3 6.08193572362264 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7455 40.279 119.0 261840.0 25 0 14008.0 + 26086 NPDSPCFKFC 10 75 579.2392304933336 1156.463908053467 2 579.7413818240166 MULTI CID FTMS 0 0 0 7451 321135.09375 1.0 0 0.0 4 Unmodified _NPDSPCFKFC_ REV__ENSG00000162643|ENST00000294664|DNAI3;REV__nc|ENSG00000162643|Q8IWG1-2|DNAI3 17.11289562659939 0.5604042439455784 4 [DP]NST{M(Oxidation (M))|F}RG 8 -1 39.907 0.0 0.0 3.4508 0.0 0.0 0.0 279.0422762506469 279.0422762506469 9.634059955566984 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3807196863200844 [DP]NST{M(Oxidation (M))|F}RG 3.4508 - 63 + 1 1.82 32469.7 1.0 3036 4417 7451 HBL1_DMSO_200M_050219_2,7455 HBL1_DMSO_200M_050219_2,7455,NPDSPCFKFC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7456 40.286 371.0 420590.0 25 0 32007.0 -1 DACFCMLM 8 134 532.1910462683535 1062.3675396035069 2 532.1910888552666 MULTI CID FTMS 0 0 0 7451 244640.453125 0.2212065751281182 -2 0.2037086486816406 5 2 Carbamidomethyl (C),Oxidation (M) _DAC(Carbamidomethyl (C))FC(Carbamidomethyl (C))MLM(Oxidation (M))_ ENST00000254810.8_2_17:73774350-73774470:-|nuORF 14.581692164780916 0.6954967302934248 4 DAY 3 -1 27.99 0.0 0.0 2.6347 0.0 0.0 0.0 710.2138142814663 710.2138142814663 1.7479764152974724 0.0 0.0 0.0 0 0.4247425010840047 1.0969100130080565 0.0 0.0 DAY 2.6347 - 138 + 1 1.82 120877.2 1.0 3037 4417 7451 HBL1_DMSO_200M_050219_2,7456 HBL1_DMSO_200M_050219_2,7456,DACFCMLM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7457 40.299 800.0 211340.0 25 0 17297.0 -1 GGPNGCKI 8 174 401.6974123061864 0 401.6973754763603 PEAK CID FTMS 0 0 0 7451 178313.390625 1.0 0 0.0 6 Carbamidomethyl (C) _GGPNGC(Carbamidomethyl (C))KI_ ENST00000407721.6_1_11:71155939-71158746:-|nuORF 9.347437153973935 0.5488964601725408 4 N 1 -1 9.2048 0.0 0.0 1.1486 0.0 0.0 131.08987968874152 553.2212823023593 684.3111619911008 0.0 0.0 0.0 0.0 0 0.2215141619232908 0.0 0.0 0.0 N 1.1486 + + 89 + 1 1.82 134328.9 0.6800000071525574 3038 4417 7451 HBL1_DMSO_200M_050219_2,7457 HBL1_DMSO_200M_050219_2,7457,GGPNGCKI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7458 40.313 800.0 238940.0 25 0 27832.0 + 11531 GIPEKDLHSV 10 134 547.7950396986308 1093.5755264640616 2 547.7958862185478 MULTI CID FTMS 0 0 0 7451 154954.421875 0.5594966095928859 -6 0.3752098083496094 7 Unmodified _GIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 82.5293158979368 0.0149949422200525 4 {[VA]|[{I|L}G]}PEKD{I|L}HSV 10 0 + 80.507 0.0 0.0 7.3618 7.3618 87.985 0.0 0.0 0.0 23.426913006155218 10.538900595307126 10.538900595307126 7.403626894942434 0 0.7059771852360797 2.0 2.263485234903719 0.0 + + {[VA]|[{I|L}G]}PEKD{I|L}HSV;{[VA]|[{I|L}G]}VS[PA]D{I|L}HSV;{[VA]|[{I|L}G]}PEKD{I|L}V[HS];[EP]KD{I|L}HSVAV;{[VA]|[{I|L}G]}VS[PA]D{I|L}V[HS];{[VA]|[{I|L}G]}[HS]VEPSVAV;{[VA]|[{I|L}G]}PWW{I|L}HSV;[EP][PA]VEPSVAV;{[VA]|[{I|L}G]}PSD{I|L}HSVAV;{[VA]|[{I|L}G]}PEKD[EP][{I|L}P] 7.3618;6.6848;6.3981;5.8091;5.7211;5.4967;5.4885;5.4033;5.3152;4.567 +;-;-;-;-;-;-;-;-;- + 4043 + 1 1.82 150824.8 0.75 3039 4417 7451 HBL1_DMSO_200M_050219_2,7458 HBL1_DMSO_200M_050219_2,7458,GIPEKDLHSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7459 40.322 530.0 235350.0 25 0 26212.0 + 21875 LPPESTQV 8 132 435.7319671401997 869.4493813471995 2 435.7322875857353 MULTI CID FTMS 0 0 0 7451 149053.15625 0.4588259648671192 -39 1.6551856994628906 8 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 20.871210003555333 0.6025813472596342 4 {NN|[MP]|[D{I|L}]|[EV]}G 3 7 21.121 0.0 0.0 2.4293 0.0 0.0 0.0 581.2926790369057 581.2926790369057 2.167066694331883 0.0 0.0 0.0 0 0.5 0.8860566476931632 0.1803115997617927 0.0 {NN|[MP]|[D{I|L}]|[EV]}G 2.4293 - 298 1 1.82 97758.9 1.0 3040 4417 7451 HBL1_DMSO_200M_050219_2,7459 HBL1_DMSO_200M_050219_2,7459,LPPESTQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7460 40.329 374.0 280690.0 25 0 29560.0 7482 EGTSNECFY 9 127 525.1961488261754 1048.3777447191508 2 525.1956664919853 MULTI CID FTMS 0 0 0 7451 145385.671875 0.7062074600817908 -4 0.3421592712402344 9 Unmodified _EGTSNECFY_ ENST00000495329.1_1_2:202488980-202490962:-|nuORF 10.823927491677226 0.5436922275383211 4 {[DA]|[EG]}VD 4 7 34.425 0.0 0.0 3.2836 0.0 0.0 0.0 645.1991918229195 645.1991918229195 18.667053245199625 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {[DA]|[EG]}VD 3.2836 - 196 1 1.82 89602.0 1.0 3041 4417 7451 HBL1_DMSO_200M_050219_2,7460 HBL1_DMSO_200M_050219_2,7460,EGTSNECFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7461 40.343 800.0 45818.0 25 0 11125.0 -1 0 33 1137.1435447949257 3408.408804984977 3 1137.477709949017 MULTI CID FTMS 0 0 0 7451 85896.921875 1.0 0 0.0 10 4 E 1 -1 5.4846 0.0 0.0 0.16091 0.0 0.0 2752.1809624352413 524.1655977838499 3276.346560219092 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16091 - 6 + 1 1.82 40887.8 0.4099999964237213 3042 4417 7451 HBL1_DMSO_200M_050219_2,7461 HBL1_DMSO_200M_050219_2,7461, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7462 40.358 800.0 85096.0 25 0 6769.5 + -1 FQEENTEKL 9 115 569.2746954430605 1136.534837952921 2 569.2748901247978 MULTI CID FTMS 0 0 0 7451 92856.1328125 1.0 0 0.0 11 Oxidation (M) _M(Oxidation (M))KEEKEQLS_ ENSG00000197170|ENST00000356126|PSMD12;nc|ENSG00000197170|O00232-2|PSMD12;ENST00000584289.5_1_17:65341859-65362635:-|nuORF 13.042465956692816 0.4836390050082244 4 {[DA]|[EG]}VV[KG]YE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 10 -1 + 28.981 0.0 0.0 2.55 2.55 62.318 0.0 0.0 0.0 1.0003158559005598 1.0003158559005598 1.0003158559005598 1.0003158559005598 0 0.5 0.721246399047171 0.7614393726401688 0.0 {[DA]|[EG]}VV[KG]YE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EY[Y{M(Oxidation (M))|F}]K{I|L};{NN|[MP]|[D{I|L}]|[EV]}[VG][KG]YE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[Y{M(Oxidation (M))|F}][YE]K{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RH]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E[HV]HH{[CT]|[{M(Oxidation (M))|F}G]} 2.55;2.4619;1.0976;0.6572;0.43563;0.43089 -;-;-;-;-;- 114 1 1.82 58109.0 0.5299999713897705 3043 4417 7451 HBL1_DMSO_200M_050219_2,7462 HBL1_DMSO_200M_050219_2,7462,MKEEKEQLS False False FQEENTEKL 40.358361 569.274890124798 999125.5625 7451.0 ENSG00000197170|ENST00000356126|PSMD12;;nc|ENSG00000197170|O00232-2|PSMD12;;ENST00000584289.5_1_17:65341859-65362635:-|nuORF 1.0210863947868347 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7464 40.363 2.7 18592000.0 25 0 2619300.0 + -1 GEVMSEMNL 9 74 513.2171555276142 1024.4197581220285 2 513.2181274294853 MULTI CID FTMS 0 0 0 7463 23224636.0 0.8808713985733794 -3 0.2955169677734375 1 Oxidation (M) _GEVM(Oxidation (M))SEMNL_ REV__ENSG00000083307|ENST00000646743|GRHL2;REV__nc|ENSG00000083307|Q6ISB3-2|GRHL2 15.847184025352805 0.4077185912009129 4 STT{I|L}{[RE]|[WV]} 6 -1 34.13 0.0 0.0 3.3316 0.0 0.0 319.0666676251969 0.0 319.0666676251969 0.0 1.6824376479242176 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 STT{I|L}{[RE]|[WV]} 3.3316 - 51 1 1.821 44596.2 1.0 3044 4418 7463 HBL1_DMSO_200M_050219_2,7464 HBL1_DMSO_200M_050219_2,7464,GEVMSEMNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7465 40.364 19.0 2820000.0 25 0 556800.0 + 41746 VPTDPPRTI 9 57 498.2802641779709 994.5459754227418 2 498.2800781130791 MULTI CID FTMS 0 0 0 7463 2868304.0 0.3852263102366869 3 -0.1682395935058593 2 Unmodified _VPTDPPRTI_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 22.65808497894818 0.2428932432760099 4 VPTDPP 6 3 64.87 0.0 0.0 6.5226 0.0 0.0 0.0 385.2230623834594 385.2230623834594 36.18562527100117 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.0 0.0 + VPTDPP 6.5226 + + 46 + 1 1.821 44430.7 1.0 3045 4418 7463 HBL1_DMSO_200M_050219_2,7465 HBL1_DMSO_200M_050219_2,7465,VPTDPPRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7466 40.365 13.0 2737300.0 25 0 148590.0 + -1 SRPDSILGMQF 11 66 633.8108642971252 1265.6071756610504 2 633.8115112185478 MULTI CID FTMS 0 0 0 7463 4511267.5 1.0 0 0.0 3 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 26.268140514670165 0.4754186812857754 4 [KQ]{I|L}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 44.729 0.0 0.0 3.5342 3.5342 66.781 0.0 0.0 0.0 2.2454626555970947 7.81234684152075 2.2454626555970947 2.2454626555970947 0 0.9802046884880938 0.0 0.3807196863200844 1.048455006504028 [KQ]{I|L}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 3.5342;3.3567;2.81;2.6326 -;-;-;- 128 1 1.821 34015.9 1.0 3046 4418 7463 HBL1_DMSO_200M_050219_2,7466 HBL1_DMSO_200M_050219_2,7466,SRPDSILGMQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7467 40.366 15.0 2728400.0 25 0 247960.0 + 11310 SQAPSTMQV 9 65 474.7263455494248 947.4381381656495 2 474.7267028689384 MULTI CID FTMS 0 0 0 7463 3218493.25 1.0 0 0.0 4 Unmodified _GEVPNGYNV_ ENSG00000112658|ENST00000265354|SRF 28.486842064014134 0.1687311288560894 4 [AG]SA 4 8 20.883 0.0 0.0 2.2042 0.0 0.0 0.0 658.287325747934 658.287325747934 0.9049891258101326 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [AG]SA 2.2042 - 117 1 1.821 40034.3 1.0 3047 4418 7463 HBL1_DMSO_200M_050219_2,7467 HBL1_DMSO_200M_050219_2,7467,GEVPNGYNV False False SQAPSTMQV 40.366378 474.726702868938 66267276.0 7463.0 ENSG00000112658|ENST00000265354|SRF 4.44966721534729 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7468 40.368 41.0 1325700.0 25 0 69972.0 -1 DFHTRCSEK 9 75 590.2663733565205 1178.5181937798409 2 590.2665893435478 MULTI CID FTMS 0 0 0 7463 1601538.25 0.5558561815917775 2 -0.1189460754394531 5 Carbamidomethyl (C) _DFHTRC(Carbamidomethyl (C))SEK_ ENST00000525002.5_1_6:135521662-135539115:+|nuORF;ENST00000528343.5_1_6:135521662-135539115:+|nuORF 21.53697664764585 0.2571576504437394 4 QHVDAAEK 8 -1 84.718 0.0 0.0 7.1885 0.0 0.0 282.0835438459 0.0 282.0835438459 0.0 76.13412548780211 0.0 0.0 0 3.1237125054200234 0.0 0.0 1.110924374808178 QHVDAAEK 7.1885 - 131 1 1.821 49713.8 1.0 3048 4418 7463 HBL1_DMSO_200M_050219_2,7468 HBL1_DMSO_200M_050219_2,7468,DFHTRCSEK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7469 40.37 94.0 697070.0 25 0 112810.0 + 21321 LPESSRGLV 9 65 479.2720558895423 956.5295588458846 2 479.2719299197197 MULTI CID FTMS 0 0 0 7463 583800.5 0.2961927869406388 9 -0.3929405212402344 6 Unmodified _LPESSRGLV_ ENST00000590866.2_1_19:1358969-1359134:+|nuORF 26.268140514670165 0.1969607489560049 4 {I|L}PESS 5 4 60.445 0.0 0.0 6.3192 0.0 0.0 0.0 440.2650850885376 440.2650850885376 32.99803764475705 0.0 0.0 0.0 0 0.6505149978319906 1.5228787452803376 0.4247425010840047 0.0 + {I|L}PESS 6.3192 + + 40 + 1 1.821 58611.3 1.0 3049 4418 7463 HBL1_DMSO_200M_050219_2,7469 HBL1_DMSO_200M_050219_2,7469,LPESSRGLV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7470 40.374 205.0 348970.0 25 0 21611.0 -1 DPNECLICH 9 100 579.2392304933336 1156.463908053467 2 579.2395507693291 MULTI CID FTMS 0 0 0 7463 516396.375 1.0 0 0.0 7 2 Carbamidomethyl (C) _DPNEC(Carbamidomethyl (C))LIC(Carbamidomethyl (C))H_ ENSG00000101115|ENST00000217086|SALL4 61.357469665136826 0.0253304979873734 4 DPNST{M(Oxidation (M))|F}R 7 -1 92.291 0.0 0.0 7.9804 0.0 0.0 0.0 336.07001672916255 336.07001672916255 69.1030140161445 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.6747425010840047 0.8807196863200843 DPNST{M(Oxidation (M))|F}R 7.9804 - 1060 + 1 1.821 61577.8 1.0 3050 4418 7463 HBL1_DMSO_200M_050219_2,7470 HBL1_DMSO_200M_050219_2,7470,DPNECLICH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7471 40.378 243.0 187500.0 25 0 18315.0 8631 EVEEDEYKAFY 11 76 711.3074425199937 1420.6003321067874 2 711.3080322146416 MULTI CID FTMS 0 0 0 7463 300796.0625 0.4367067300974073 2 -0.1189460754394531 8 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 17.11289562659939 0.6791789249425932 4 [QA]HDEAGAQNA{M(Oxidation (M))|F}Y 13 9 + 70.452 0.0 0.0 4.9593 4.9593 70.013 0.0 0.0 0.0 1.079053973095185 53.46256682698029 1.079053973095185 1.2763625255165325 0 0.8935078169319297 0.0 0.4247425010840047 0.805462187404089 [QA]HDEAGAQNA{M(Oxidation (M))|F}Y;[QA]HDEAGANQA{M(Oxidation (M))|F}Y;[QA]HDAEGAQNA{M(Oxidation (M))|F}Y;[QA]HDAEGANQA{M(Oxidation (M))|F}Y;[QA]HDEQAQNA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEQANQA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAGA[AG]NA{M(Oxidation (M))|F}Y;[QA]HDEAGAQGGA{M(Oxidation (M))|F}Y 4.9593;4.8695;4.7474;4.6576;4.4918;4.4918;4.4019;4.4019;4.3207;4.3207 -;-;-;-;-;-;-;-;-;- 1925 1 1.821 38993.4 1.0 3051 4418 7463 HBL1_DMSO_200M_050219_2,7471 HBL1_DMSO_200M_050219_2,7471,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7472 40.386 430.0 227400.0 25 0 40317.0 287 ADPPAGFQT 9 111 452.2136279595956 0 452.2139160037041 PEAK CID FTMS 0 0 0 7463 179016.59375 1.0 0 0.0 9 Unmodified _ADPPAGFQT_ chr5:151742959-151746275|18|53.33|0.57|6.55|-|0|ATOX1,None|1;ENST00000522145.5_1_5:151122460-151125911:-|nuORF 6.723162845929126 0.3444685223463734 4 Y 1 9 5.4846 0.0 0.0 0.60777 0.0 0.0 185.0697597260288 551.2597750299436 736.3295347559724 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.60777 - 17 + 1 1.821 82751.1 1.0 3052 4418 7463 HBL1_DMSO_200M_050219_2,7472 HBL1_DMSO_200M_050219_2,7472,ADPPAGFQT False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 7473 40.39 246.0 373520.0 25 0 29591.0 + 37135 THHIIGSVI 9 115 488.782987973846 975.551423014492 2 488.7827331423759 MULTI CID FTMS 0 0 0 7463 175540.796875 0.3227742886365726 -4 0.3980178833007812 10 Unmodified _THHIIGSVI_ REV__ENSG00000150712|ENST00000382142|MTMR12;REV__nc|ENSG00000150712|Q9C0I1-2|MTMR12;REV__nc|ENSG00000150712|Q9C0I1-3|MTMR12 42.09456458481378 0.0639583784996157 4 EVA[C(Carbamidomethyl (C))K]SV{I|L} 8 -1 40.302 0.0 0.0 4.1312 0.0 0.0 71.07434279609531 0.0 71.07434279609531 0.0 18.339125404248904 0.0 0.0 0 1.0114393726401687 0.0 0.7614393726401688 0.0 EVA[C(Carbamidomethyl (C))K]SV{I|L} 4.1312 - 950 1 1.821 72154.7 1.0 3053 4418 7463 HBL1_DMSO_200M_050219_2,7473 HBL1_DMSO_200M_050219_2,7473,THHIIGSVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7474 40.404 800.0 139160.0 25 0 13488.0 + 29215 QGLEMPGYDC 10 140 556.7240973084029 1111.4336416836056 2 556.7248412966728 MULTI CID FTMS 0 0 0 7463 148930.21875 0.3503277039990473 2 -0.1189460754394531 11 Unmodified _QGLEMPGYDC_ REV__ENST00000475441.5_1_1:28905145-28906492:-|nuORF;REV__nc|ENSG00000197989|Q9BXW3|SNHG12 10.073929032068715 0.6785112666868882 4 {[QG]|[NA]}{I|L} 3 -1 30.432 0.0 0.0 2.7381 0.0 0.0 0.0 810.2463302424525 810.2463302424525 10.837742452234096 0.0 0.0 0.0 0 0.0 2.0 0.0 0.4489700043360188 {[QG]|[NA]}{I|L} 2.7381 + + 217 1 1.821 90214.1 0.75 3054 4418 7463 HBL1_DMSO_200M_050219_2,7474 HBL1_DMSO_200M_050219_2,7474,QGLEMPGYDC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7475 40.418 800.0 130720.0 25 0 13784.0 + -1 CWMTSSTCC 9 140 539.6750777610176 1077.3356025888352 2 539.6744872927666 MULTI CID FTMS 0 0 0 7463 146512.21875 1.0 0 0.0 12 Carbamidomethyl (C) _CWMTSSTC(Carbamidomethyl (C))C_ REV__ENST00000397117.5_1_3:10345759-10345831:-|nuORF 2.302733041254933 0.8342969208511092 4 {[DA]|[EG]}V 3 -1 27.447 0.0 0.0 2.5477 0.0 0.0 0.0 789.1796632179945 789.1796632179945 9.03424574685009 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V 2.5477 - 147 1 1.821 88383.9 0.7099999785423279 3055 4418 7463 HBL1_DMSO_200M_050219_2,7475 HBL1_DMSO_200M_050219_2,7475,CWMTSSTCC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7476 40.432 800.0 237590.0 25 0 15679.0 + 35064 SQTSVAERL 9 178 495.76525718723616 989.5159614412725 2 495.7650939822197 MULTI CID FTMS 0 0 0 7463 143661.140625 0.5305475093910175 -2 0.171417236328125 13 Unmodified _SQTSVAERL_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1 45.739877483867886 0.0497104363764649 4 {[QS]|[NT]}TSVAER{I|L} 9 0 + 67.193 0.0 0.0 6.7905 6.7905 83.232 0.0 0.0 0.0 14.843153501409766 4.573771965239047 4.573771965239047 4.573771965239047 0 1.0 0.7695510786217261 0.4247425010840047 0.2396518287104437 + + {[QS]|[NT]}TSVAER{I|L};{[QS]|[NT]}TSVAE{I|L}R;{[QS]|[NT]}TSVA[W{I|L}]V;{[QS]|[NT]}T{I|L}GSER{I|L};{[QS]|[NT]}{I|L}{[CA]|SS}AER{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GSVAER{I|L};{[QS]|[NT]}{I|L}TGSER{I|L};{[QS]|[NT]}T{I|L}GSE{I|L}R;{[QS]|[NT]}TS[W{I|L}]R{I|L};{[QS]|[NT]}{I|L}{[CA]|SS}AE{I|L}R 6.7905;6.3282;5.5963;5.0406;4.7434;4.5961;4.5842;4.5783;4.5451;4.2812 +;-;-;-;-;-;-;-;-;- + 807 + 1 1.821 144672.6 0.6600000262260437 3056 4418 7463 HBL1_DMSO_200M_050219_2,7476 HBL1_DMSO_200M_050219_2,7476,SQTSVAERL True True SQTSVAERL 40.431796 495.76509398222 1683761.375 7463.0 ENSG00000171456|ENST00000375687|ASXL1;;ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant 5.483648935953776 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7478 40.448 799.0 179840.0 25 0 41668.0 + 33294 SFQRNVRSL 9 123 553.8068695426309 1105.5991861520615 2 553.8071166872978 MULTI CID FTMS 0 0 0 7477 106203.3828125 0.1528910280334478 3 -0.1538467407226562 1 Unmodified _SFQRNVRSL_ ENST00000376007.8_1_6:31588511-31590634:+|nuORF 36.506200033944 0.094635877243972 4 [PS]V[WY]VRTV 9 6 [PS]V[WY]V + + 24.556 -6.311 -0.8629 2.2211 2.2211 44.764 0.0 0.0 0.0 0.0 0.3749925880815929 0.0 0.0 0 0.9247425010840048 0.0 0.25 0.2887254899964357 [PS]V[WY]VRTV 2.2211 - 169 + 1 1.821 110894.7 1.0 3057 4419 7477 HBL1_DMSO_200M_050219_2,7478 HBL1_DMSO_200M_050219_2,7478,SFQRNVRSL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7479 40.45 116.0 917040.0 25 0 274980.0 -1 0 95 317.1581304402976 316.1508539736976 1 317.1546813845634 MULTI CID FTMS 0 0 0 7477 427512.96875 0.9427744320714414 -7 0.5129280090332031 2 4 V 1 -1 12.218 0.0 0.0 3.8648 0.0 0.0 199.07142237145 0.0 199.07142237145 0.0 1.839883926472972 0.0 0.0 0 0.0 0.0 0.0 0.0 V 3.8648 - 23 + 1 1.821 92400.8 1.0 3058 4419 7477 HBL1_DMSO_200M_050219_2,7479 HBL1_DMSO_200M_050219_2,7479, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7480 40.454 164.0 520780.0 25 0 57909.0 + 15203 IPESQIRQV 9 112 535.3037934879691 1068.593034042738 2 535.3022338747978 MULTI CID FTMS 0 0 0 7477 240363.0625 0.2253537426693404 -5 0.4715118408203125 3 Unmodified _IPESQIRQV_ ENSG00000179409|ENST00000319004|GEMIN4 51.629811660486645 0.0367964933207742 4 {I|L}PESQ{I|L}RN{I|L} 9 2 + 94.713 0.0 0.0 8.8633 8.8633 93.174 0.0 0.0 0.0 31.706962271689747 12.028937514676484 12.028937514676484 9.208187539523747 0 1.1382104921644451 1.5228787452803376 0.805462187404089 0.3494850021680094 {I|L}PESQ{I|L}RN{I|L};{I|L}PES[AG]{I|L}RN{I|L};{I|L}PESQ{I|L}RQV;{I|L}PESQ{I|L}RGG{I|L};{I|L}PES[AG]{I|L}RQV;{I|L}PEV[QT]RN{I|L};{I|L}PES[AG]{I|L}RGG{I|L};{I|L}PESQ{I|L}R[AG]V;{I|L}PEV[QT]RQV;{I|L}PES[AG]{I|L}R[AG]V 8.8633;8.0016;7.7376;7.6746;6.8759;6.8281;6.8169;6.5489;5.7024;5.6913 -;-;+;-;-;-;-;-;-;- + 308 + 1 1.821 74704.4 1.0 3059 4419 7477 HBL1_DMSO_200M_050219_2,7480 HBL1_DMSO_200M_050219_2,7480,IPESQIRQV True True IPESQIRQV 40.453554 535.302233874798 10221196.0 7477.0 ENSG00000179409|ENST00000319004|GEMIN4 6.558258374532064 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7481 40.463 563.0 269130.0 25 0 21696.0 + 44971 YPRHKHLLI 9 127 392.90476717081424 1175.6924721126427 3 392.9045287966728 MULTI CID FTMS 0 0 0 7477 138574.328125 0.6241604938019636 -4 0.3690109252929687 4 Unmodified _YPRHKHLLI_ ENSG00000132912|ENST00000447998|DCTN4;nc|ENSG00000132912|Q9UJW0-2|DCTN4;nc|ENSG00000132912|Q9UJW0-3|DCTN4 28.49450938151212 0.1686335738423394 4 Y{I|L}H{I|L}{I|L} 5 5 37.479 0.0 0.0 3.1879 0.0 0.0 518.3081486499666 0.0 518.3081486499666 0.0 28.015384402724592 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 Y{I|L}H{I|L}{I|L} 3.1879 - 248 1 1.821 123597.5 1.0 3060 4419 7477 HBL1_DMSO_200M_050219_2,7481 HBL1_DMSO_200M_050219_2,7481,YPRHKHLLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7482 40.477 800.0 163290.0 25 0 12764.0 + 35138 SQYSGQLHEV 10 162 574.2721637074974 1146.529774481795 2 574.2726318240166 MULTI CID FTMS 0 0 0 7477 116143.8203125 0.5527716575227231 1 -0.0454521179199218 5 Unmodified _SQYSGQLHEV_ ENSG00000144645|ENST00000396556|OSBPL10;ENST00000466604.5_1_3:31863684-32001816:-|nuORF 49.52724829834842 0.0829255630816734 4 {[QS]|[NT]}{I|L}[PA]QGS{[WS]|[C(Carbamidomethyl (C)){I|L}]}S 11 8 + 62.706 0.0 0.0 5.4692 5.4692 54.548 0.0 0.0 0.0 8.643948177770731 8.120160641414152 8.120160641414152 0.0 0 0.8807196863200843 1.0969100130080565 0.6203715150305281 0.3494850021680094 {[QS]|[NT]}{I|L}[PA]QGS{[WS]|[C(Carbamidomethyl (C)){I|L}]}S;{[QS]|[NT]}[PA]{I|L}QGS{[WS]|[C(Carbamidomethyl (C)){I|L}]}S;{[QS]|[NT]}YSVSYVQS;[AG]S[PA]{I|L}QGS{[WS]|[C(Carbamidomethyl (C)){I|L}]}S;[AG]S{I|L}[PA]QGS{[WS]|[C(Carbamidomethyl (C)){I|L}]}S;{[QS]|[NT]}YSVSVYQS;{[QS]|[NT]}{I|L}[PA]QG[MT]QS;{[QS]|[NT]}[PA]{I|L}QG[MT]QS;{[QS]|[NT]}Y{[VA]|[{I|L}G]}HEVQS;{[QS]|[NT]}{I|L}[YG]HEVQS 5.4692;5.4692;4.8143;4.7153;4.7153;4.6608;4.5425;4.5425;4.4896;4.4697 -;-;-;-;-;-;-;-;-;- 5260 1 1.821 100130.2 0.5899999737739563 3061 4419 7477 HBL1_DMSO_200M_050219_2,7482 HBL1_DMSO_200M_050219_2,7482,SQYSGQLHEV True True SQYSGQLHEV 40.477242 574.272631824017 1420435.25 7477.0 ENST00000466604.5_1_3:31863684-32001816:-|nuORF;;ENSG00000144645|ENST00000396556|OSBPL10 6.895438512166341 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7484 40.482 15.0 3862700.0 25 0 420850.0 + 24976 MPPPPPQGV 9 91 460.23852327962805 918.462493626056 2 460.2391540408134 MULTI CID FTMS 0 0 0 7483 4214144.0 0.22739766564361 -38 1.7599945068359375 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 56.541270873467816 0.0279970378729908 4 {NN|[MP]|[D{I|L}]|[EV]}PPP 5 4 29.019 0.0 0.0 3.1595 0.0 0.0 0.0 396.1870086642303 396.1870086642303 -6.844968372557759 0.0 -6.844968372557759 0.0 0 1.16944517631652 0.0 0.2887254899964357 0.0 + {NN|[MP]|[D{I|L}]|[EV]}PPP 3.1595 + + 323 1 1.821 48214.5 1.0 3062 4420 7483 HBL1_DMSO_200M_050219_2,7484 HBL1_DMSO_200M_050219_2,7484,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7485 40.483 46.0 1363400.0 25 0 149650.0 + 41297 VPHTRPVSL 9 81 335.8664553650867 1004.57753669546 3 335.8660156130791 MULTI CID FTMS 0 0 0 7483 1096950.75 0.0380710761638958 6 -0.2590065002441406 2 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 53.40400417844725 0.0329064971918313 4 DHPV{I|L} 5 5 48.8 0.0 0.0 4.8578 0.0 0.0 425.2759571759781 0.0 425.2759571759781 0.0 8.138181262758266 0.0 0.0 0 0.4247425010840047 0.0 1.1989700043360187 0.0 DHPV{I|L} 4.8578 - 196 1 1.821 56953.5 1.0 3063 4420 7483 HBL1_DMSO_200M_050219_2,7485 HBL1_DMSO_200M_050219_2,7485,VPHTRPVSL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7486 40.485 71.0 948940.0 25 0 103310.0 41511 VPNLNQSLV 9 90 492.2802795309003 982.5460061286008 2 492.2851440310478 MULTI CID FTMS 0 0 0 7483 664541.125 0.0665969429635739 -8 0.558380126953125 3 Unmodified _VPNLNQSLV_ ENSG00000197057|ENST00000639862|DTHD1;nc|ENSG00000197057|Q6ZMT9-2|DTHD1;nc|ENSG00000197057|Q6ZMT9|DTHD1 30.63653989081413 0.1413794767160703 4 VPNAT{I|L} 6 5 59.174 0.0 0.0 6.0225 0.0 0.0 0.0 384.2006929986938 384.2006929986938 33.767959391884546 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.805462187404089 VPNAT{I|L} 6.0225 - 130 + 1 1.821 58189.1 1.0 3064 4420 7483 HBL1_DMSO_200M_050219_2,7486 HBL1_DMSO_200M_050219_2,7486,VPNLNQSLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7487 40.487 116.0 468440.0 25 0 39753.0 + 34771 SQAPSTMQV 9 101 482.7233625623836 963.4321721915672 2 482.7234985232353 MULTI CID FTMS 0 0 0 7483 660666.8125 0.7633269938597588 2 -0.1083946228027343 4 Oxidation (M) _SQAPSTM(Oxidation (M))QV_ ENSG00000112658|ENST00000265354|SRF 43.77239144664712 0.0547478964384323 4 [PA]ENA 5 7 24.023 0.0 0.0 2.4935 0.0 0.0 0.0 478.1944762289298 478.1944762289298 2.5643134995392494 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [PA]ENA 2.4935 - 312 1 1.821 48200.6 1.0 3065 4420 7483 HBL1_DMSO_200M_050219_2,7487 HBL1_DMSO_200M_050219_2,7487,SQAPSTMQV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7488 40.489 79.0 740030.0 25 0 72784.0 + 43101 VYNVTQHAV 9 93 515.7687928705482 1029.5230328078962 2 515.7689086794853 MULTI CID FTMS 0 0 0 7483 589354.4375 0.718503020256244 2 -0.1083946228027343 5 Unmodified _VYNVTQHAV_ ENSG00000122026|ENST00000311549|RPL21;ENST00000397467.2_1_3:1947466-1947595:+|nuORF;ENST00000483765.5_1_13:27827977-27830662:+|nuORF;ENST00000488408.1_1_3:153741662-153741884:+|nuORF 27.22323531849824 0.1848086127304535 4 [YV]NVTQ 6 3 57.128 0.0 0.0 5.549 0.0 0.0 0.0 322.15257820504337 322.15257820504337 46.01850649356642 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.8494850021680094 + [YV]NVTQ 5.549 + + 194 + 1 1.821 49805.2 1.0 3066 4420 7483 HBL1_DMSO_200M_050219_2,7488 HBL1_DMSO_200M_050219_2,7488,VYNVTQHAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7489 40.491 107.0 538750.0 25 0 95878.0 + 11528 GIPEKDLHSV 10 87 365.53319332565394 1093.577750577162 3 365.5329467654228 MULTI CID FTMS 0 0 0 7483 464852.71875 0.9131783925104489 -1 0.0454521179199218 6 Unmodified _GIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 51.629811660486645 0.0705852162080619 4 {[VA]|[{I|L}G]}PEKD{I|L}HSV 10 0 + 56.288 0.0 0.0 5.1472 5.1472 86.702 0.0 0.0 0.0 25.90166223149673 10.48455006504028 10.48455006504028 32.242044859456016 0 0.3807196863200844 2.0 1.024227503252014 0.0 + + {[VA]|[{I|L}G]}PEKD{I|L}HSV;[HS]V{[VA]|[{I|L}G]}EPSVAV;[HS]V{[VA]|[{I|L}G]}ESPVAV;[H{I|L}]WWPS[R{I|L}];[H{I|L}]PWWS[R{I|L}];[H{I|L}]WWSP[R{I|L}];[HS]V{[VA]|[{I|L}G]}ESVPAV;[HS]R[QP]NS[R{I|L}];[H{I|L}]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[DS]|[MA]|[CV]|TT}VAV;[HS]V{[VA]|[{I|L}G]}[TP]DVAV 5.1472;2.1989;1.6483;1.5673;1.5673;1.0168;0.68958;0.67537;0.54495;0.18682 +;-;-;-;-;-;-;-;-;- + 356 + 1 1.821 56233.9 1.0 3067 4420 7483 HBL1_DMSO_200M_050219_2,7489 HBL1_DMSO_200M_050219_2,7489,GIPEKDLHSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7490 40.494 140.0 391430.0 25 0 41047.0 + 21041 LPAASQPQV 9 93 455.75335734232647 909.492161751453 2 455.7536193728447 MULTI CID FTMS 0 0 0 7483 323748.21875 0.3958643941479915 3 -0.1617584228515625 7 Unmodified _LPAASQPQV_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 63.562846038646086 0.0241094678104353 4 [{I|L}P]AASQ 6 3 39.362 0.0 0.0 4.3279 0.0 0.0 0.0 339.16742115311826 339.16742115311826 22.947946504140766 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.7302046884880937 0.3252574989159953 + [{I|L}P]AASQ 4.3279 + + 200 1 1.821 49045.4 1.0 3068 4420 7483 HBL1_DMSO_200M_050219_2,7490 HBL1_DMSO_200M_050219_2,7490,LPAASQPQV True True LPAASQPQV 40.494027 455.753619372845 14002726.0 7483.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 6.119111061096191 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7491 40.503 494.0 309710.0 25 0 25855.0 + 30699 RFQSSAVM 8 138 463.23147654016384 924.4484001471276 2 463.2310058474541 MULTI CID FTMS 0 0 0 7483 168863.28125 0.0082868728125676 9 -0.3918266296386719 8 Unmodified _RFQSSAVM_ ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7 20.453626601364224 0.6087503291685402 4 [{I|L}P]M[YT]AVM 8 5 [{I|L}P]M[YT]A + + 28.271 -1.2877 -0.1904 3.0582 3.0582 46.052 0.0 0.0 0.0 0.0 11.040631375222883 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 [{I|L}P]M[YT]AVM 3.0582 - 1646 + 1 1.821 121352.5 1.0 3069 4420 7483 HBL1_DMSO_200M_050219_2,7491 HBL1_DMSO_200M_050219_2,7491,RFQSSAVM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7492 40.511 447.0 255520.0 25 0 29704.0 + 11300 GEVGDYCFGT 10 123 524.2073489792584 1046.4001450253168 2 524.2083007693291 MULTI CID FTMS 0 0 0 7483 164794.40625 1.0 0 0.0 9 Unmodified _GEVGDYCFGT_ REV__ENSG00000136295|ENST00000258796|TTYH3;REV__nc|ENSG00000136295|Q9C0H2-2|TTYH3;REV__nc|ENSG00000136295|Q9C0H2-3|TTYH3;REV__nc|ENSG00000136295|Q9C0H2-4|TTYH3 13.90604991867851 0.6142120002215601 4 {[DA]|[EG]}V{I|L} 4 -1 38.672 0.0 0.0 3.6957 0.0 0.0 0.0 645.1632722651586 645.1632722651586 22.11758134947864 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V{I|L} 3.6957 - 254 + 1 1.821 101703.9 1.0 3070 4420 7483 HBL1_DMSO_200M_050219_2,7492 HBL1_DMSO_200M_050219_2,7492,GEVGDYCFGT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7493 40.519 487.0 292200.0 25 0 20410.0 -1 LNSAVSCGY 9 154 485.717288151578 969.420023369956 2 485.7178832888603 MULTI CID FTMS 0 0 0 7483 136016.0 0.7463705314349309 1 -0.0492935180664062 10 Carbamidomethyl (C) _LNSAVSC(Carbamidomethyl (C))GY_ ENST00000300403.10_1_20:30388876-30389098:+|nuORF 20.453626601364224 0.2830276176381075 4 {[QS]|[NT]}A[RK]{I|L}AS 8 -1 39.984 0.0 0.0 4.1246 0.0 0.0 0.0 124.93060183387448 124.93060183387448 18.821384935422945 0.0 0.0 0.0 0 1.0 0.6989700043360187 0.1307196863200844 0.2302046884880938 {[QS]|[NT]}A[RK]{I|L}AS 4.1246 - 1319 1 1.821 111904.5 1.0 3071 4420 7483 HBL1_DMSO_200M_050219_2,7493 HBL1_DMSO_200M_050219_2,7493,LNSAVSCGY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7494 40.527 408.0 313800.0 25 0 46395.0 + 24948 MPPPPPQGV 9 122 468.2364995746263 0 468.2366515994072 PEAK CID FTMS 0 0 0 7483 126542.0546875 0.1583832562397244 -39 1.7727775573730469 11 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 40.44857923139169 0.0595120860820594 4 PP 2 7 10.762 0.0 0.0 1.1517 0.0 0.0 399.2115332115308 338.1186922662719 737.3302254778027 0.0 0.0 0.0 0.0 0 0.5189301784845296 0.0 0.0 0.0 + PP 1.1517 + + 168 + 1 1.821 102273.7 1.0 3072 4420 7483 HBL1_DMSO_200M_050219_2,7494 HBL1_DMSO_200M_050219_2,7494,MPPPPPQGV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7496 40.544 800.0 132030.0 25 0 13318.0 21225 LPDGRSVV 8 137 421.7400262075968 841.4654994819936 2 421.7403747439384 MULTI CID FTMS 0 0 0 7495 66948.109375 0.5845266323327607 1 -0.0591011047363281 1 Unmodified _LPDGRSVV_ ENSG00000154359|ENST00000398246|LONRF1;nc|ENSG00000154359|Q17RB8-2|LONRF1 18.13498045792455 0.6430038125133779 4 [{I|L}P]S[KC]PVV 8 4 + 43.99 0.0 0.0 5.2277 5.2277 78.613 0.0 0.0 0.0 6.020599913279625 11.8943306386236 6.020599913279625 6.020599913279625 0 0.3807196863200844 2.0 0.3807196863200844 0.0 [{I|L}P]S[KC]PVV;[VP]T[KC]PVV;[{I|L}T][WQ]PVV;{[SA]|[TG]}[RD]PVVV;[{I|L}P]S{[RE]|[WV]}AAV;[TP][KC]PVVV;[TP]V[KC]PVV;{[TV]|[{I|L}S]}YYVVV;[{I|L}P]P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAV;{[SA]|[TG]}[RD]VPVV 5.2277;4.5122;2.653;2.6194;2.547;2.5062;2.3578;2.3528;2.3377;2.2617 -;-;-;-;-;-;-;-;-;- 281 1 1.821 84630.9 0.5 3073 4421 7495 HBL1_DMSO_200M_050219_2,7496 HBL1_DMSO_200M_050219_2,7496,LPDGRSVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7497 40.545 59.0 1222700.0 25 0 240660.0 + 38835 TVIAKVNNV 9 88 479.29005932322207 956.5655657132442 2 479.2901489138603 MULTI CID FTMS 0 0 0 7495 679430.6875 0.2187464333369446 -4 0.2600479125976562 2 Unmodified _TVIAKVNNV_ ENSG00000113407|ENST00000265112|TARS1;nc|ENSG00000113407|P26639-2|TARS1 26.88365393820708 0.1891292719743517 4 {[TV]|[{I|L}S]}[KC]NV{I|L}N 8 5 42.33 0.0 0.0 4.4252 0.0 0.0 0.0 82.06692682437733 82.06692682437733 29.23061874357608 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.6989700043360187 {[TV]|[{I|L}S]}[KC]NV{I|L}N 4.4252 - 347 + 1 1.821 61153.6 1.0 3074 4421 7495 HBL1_DMSO_200M_050219_2,7497 HBL1_DMSO_200M_050219_2,7497,TVIAKVNNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7498 40.547 92.0 778660.0 25 0 60422.0 -1 0 87 488.3080091707508 487.3007327041508 1 488.3080016970634 MULTI CID FTMS 0 0 0 7495 424164.59375 1.0 0 0.0 3 4 {[VA]|[{I|L}G]}VTV 5 -1 + 61.07 0.0 0.0 12.532 12.532 97.768 0.0 0.0 0.0 19.867034247796767 16.020599913279625 16.020599913279625 19.867034247796767 0 0.805462187404089 1.6989700043360187 0.3807196863200844 0.0 {[VA]|[{I|L}G]}VTV;{[TV]|[{I|L}S]}VAV;[VS]{I|L}AV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L} 12.532;8.4553;6.5551;1.8896 -;-;-;- 71 1 1.821 58871.2 1.0 3075 4421 7495 HBL1_DMSO_200M_050219_2,7498 HBL1_DMSO_200M_050219_2,7498, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7499 40.551 187.0 562220.0 25 0 79726.0 -1 TALKIMKV 8 120 307.1931413087347 918.5575945264042 3 307.1927673220634 MULTI CID FTMS 0 0 0 7495 275925.59375 0.8587798613949249 -2 0.0947456359863281 4 Oxidation (M) _TALKIM(Oxidation (M))KV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 22.736283301280096 0.5659792798204337 4 [TA]{I|L}K{I|L}{M(Oxidation (M))|F}KV 8 -1 + 54.756 0.0 0.0 5.9611 5.9611 90.338 0.0 0.0 0.0 42.9851014694977 9.30578591241531 9.30578591241531 36.807011180249305 0 0.3054621874040891 1.6989700043360187 0.0 0.0 [TA]{I|L}K{I|L}{M(Oxidation (M))|F}KV;[K{I|L}][YT]K{I|L}[PG] 5.9611;1.9541 +;- + 111 + 1 1.821 92881.7 1.0 3076 4421 7495 HBL1_DMSO_200M_050219_2,7499 HBL1_DMSO_200M_050219_2,7499,TALKIMKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7500 40.555 242.0 209030.0 25 0 8477.2 + 16546 KAWENSPNV 9 87 522.7587473133962 1043.5029416935922 2 522.7576171755791 MULTI CID FTMS 0 0 0 7495 203192.390625 0.5076913148693366 -2 0.0947456359863281 5 Unmodified _KAWENSPNV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 63.960520009940105 0.0238892913700936 4 V[QT]SNWPNV 9 5 + 75.843 0.0 0.0 7.2681 7.2681 90.128 0.0 0.0 0.0 51.89818981687438 14.973024840566469 14.973024840566469 9.208187539523747 0 0.7059771852360797 0.0 0.7614393726401688 2.0356668758921828 V[QT]SNWPNV;V[QT]SGGWPNV;V[C(Carbamidomethyl (C))R]NWPNV;V[QT]SNWPGGV;V[QT]WNSPNV;V[QT]SNER[NP];V[QT]SNWV[NP];V[C(Carbamidomethyl (C))R]GGWPNV;[QT]RENSPNV;[QT]VWNSPNV 7.2681;6.3857;5.9897;5.7281;5.7146;5.4909;5.3766;5.1021;4.9738;4.8595 -;-;-;-;-;-;-;-;-;- 757 + 1 1.821 53486.8 1.0 3077 4421 7495 HBL1_DMSO_200M_050219_2,7500 HBL1_DMSO_200M_050219_2,7500,KAWENSPNV True True KAWENSPNV 40.555195 522.757617175579 3256519.75 7495.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 8.998271942138672 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7501 40.569 800.0 255870.0 25 0 18561.0 + 7198 EEQLQQIRAE 10 140 622.3176201756396 1242.6206874180791 2 622.3184692263603 MULTI CID FTMS 0 0 0 7495 152091.515625 0.2195176917531219 -4 0.2600479125976562 6 Unmodified _EEQLQQIRAE_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 150.61878029816774 4.2759518620235246e-05 4 EEQ{I|L}QQ{I|L}RAE 10 0 + 105.94 0.0 0.0 8.5253 8.5253 91.784 0.0 0.0 0.0 24.259687322722783 17.21517972237018 17.21517972237018 9.164539485499231 0 1.656038390922711 1.6989700043360187 1.2658715643802767 1.8996498648046136 + + EEQ{I|L}QQ{I|L}RAE;EEQ{I|L}[AG]Q{I|L}RAE;EE[AG]{I|L}QQ{I|L}RAE;EEQ{I|L}Q[AG]{I|L}RAE;EEQ{I|L}QQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};EEQ{I|L}[AG][AG]{I|L}RAE;EE[AG]{I|L}Q[AG]{I|L}RAE;EE[AG]{I|L}[AG]Q{I|L}RAE;EE[AG]{I|L}QQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};EEQ{I|L}[AG]Q{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 8.5253;7.7878;7.7878;7.7878;7.14;7.0532;7.0532;7.0532;6.4024;6.4024 +;-;-;-;-;-;-;-;-;- + 4358 + 1 1.821 155045.7 0.6499999761581421 3078 4421 7495 HBL1_DMSO_200M_050219_2,7501 HBL1_DMSO_200M_050219_2,7501,EEQLQQIRAE True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 7502 40.574 291.0 509710.0 25 0 49738.0 + 30960 RLAHYIDRV 9 121 381.5529372736155 1141.6369824210465 3 381.5526611208916 MULTI CID FTMS 0 0 0 7495 139472.203125 1.0 0 0.0 7 Unmodified _RLAHYIDRV_ ENSG00000176619|ENST00000325327|LMNB2 11.517880264261096 0.5249077435482886 4 VYERV 5 6 17.115 0.0 0.0 1.4992 0.0 0.0 477.2821422260159 0.0 477.2821422260159 0.0 4.897000433601875 0.0 0.0 0 0.5 0.0 0.0 0.0 VYERV 1.4992 - 106 + 1 1.821 117984.3 1.0 3079 4421 7495 HBL1_DMSO_200M_050219_2,7502 HBL1_DMSO_200M_050219_2,7502,RLAHYIDRV False True RLAHYIDRV 40.574366 381.552661120892 958105.5625 7495.0 ENSG00000176619|ENST00000325327|LMNB2 5.661247571309407 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7503 40.586 646.0 252840.0 25 0 27779.0 + 45472 YTIPPGHQV 9 166 506.2664900810326 1010.5184272288652 2 506.2669250369072 MULTI CID FTMS 0 0 0 7495 133868.8125 0.664114163462731 -4 0.2600479125976562 8 Unmodified _YTIQSFRP_ ENST00000492267.1_1_3:82855892-82856129:-|nuORF;ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF 34.10243960390752 0.3329570729325616 4 [YT]{I|L}PPGHN{I|L} 9 6 + 42.038 0.0 0.0 4.1601 4.1601 67.209 0.0 0.0 0.0 4.357172030975434 1.4612803567823818 1.4612803567823818 1.4612803567823818 0 0.4247425010840047 1.5228787452803376 0.0 0.4650302283996909 [YT]{I|L}PPGHN{I|L};[YT]{I|L}PPGHQV;[YT][RN]V{I|L}[{M(Oxidation (M))|F}V];[YT]{I|L}Q[YR]AP;[YT]{I|L}PPGH{I|L}N;[VS][YR]Q{I|L}[{M(Oxidation (M))|F}V];[YT]{I|L}V[RN]{M(Oxidation (M))|F}V;[YT]{I|L}PPGHGG{I|L};[YT]{I|L}[AG][YR]AP;[YT]{I|L}PPGH[AG]V 4.1601;4.0155;3.7289;3.6979;3.4599;2.9022;2.8914;2.7887;2.7813;2.644 -;-;-;-;-;-;-;-;-;- 602 + 1 1.821 128383.0 1.0 3080 4421 7495 HBL1_DMSO_200M_050219_2,7503 HBL1_DMSO_200M_050219_2,7503,YTIQSFRP False False YTIPPGHQV 40.585608 506.266925036907 21425197.5 7495.0 ENST00000492267.1_1_3:82855892-82856129:-|nuORF;;ENSG00000001630|ENST00000003100|CYP51A1;;nc|ENSG00000001630|Q16850-2|CYP51A1;;ENST00000419457.1_1_13:29296686-29297403:-|nuORF 9.31781800587972 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7505 40.59 13.0 3935000.0 25 0 367850.0 + 44778 YPLSKAQTV 9 76 503.7820742905152 1005.5495956478304 2 503.7822143435478 MULTI CID FTMS 0 0 0 7504 4220155.0 0.6809962706334695 5 -0.1655998229980468 1 Unmodified _YPLSKAQTV_ ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3 68.08070601005525 0.0218408846571049 4 YP{I|L}S 4 5 68.972 0.0 0.0 6.8592 0.0 0.0 0.0 542.2923383221049 542.2923383221049 47.648546751633205 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 1.1989700043360187 0.0 + YP{I|L}S 6.8592 + + 241 + 1 1.821 42502.9 1.0 3081 4422 7504 HBL1_DMSO_200M_050219_2,7505 HBL1_DMSO_200M_050219_2,7505,YPLSKAQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7506 40.594 210.0 621520.0 25 0 54931.0 -1 IDECDPDPC 9 122 532.1910462683535 1062.3675396035069 2 532.1912109255791 MULTI CID FTMS 0 0 0 7504 494991.0 0.4475762795178249 3 -0.1115493774414062 2 Carbamidomethyl (C) _IDEC(Carbamidomethyl (C))DPDPC_ ENSG00000148400|ENST00000651671|NOTCH1 15.847184025352805 0.4077185912009129 4 {I|L}DT 3 -1 29.481 0.0 0.0 2.7751 0.0 0.0 0.0 730.1828707330686 730.1828707330686 6.293709283484077 0.0 0.0 0.0 0 0.0 0.0 0.566901560044258 0.0 {I|L}DT 2.7751 - 64 + 1 1.821 102406.2 1.0 3082 4422 7504 HBL1_DMSO_200M_050219_2,7506 HBL1_DMSO_200M_050219_2,7506,IDECDPDPC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7507 40.599 239.0 379130.0 25 0 82984.0 + 19935 LIDENDNKI 9 90 537.2774954150887 1072.5404378969772 2 537.2773925662041 MULTI CID FTMS 0 0 0 7504 387185.53125 0.1640423595273903 -6 0.3987579345703125 3 Unmodified _LIDENDNKI_ ENSG00000067064|ENST00000381344|IDI1;ENST00000482091.1_1_10:1089912-1094811:-|nuORF;nc|ENSG00000067064|Q13907|IDI1 71.92227651296345 0.0203558744033348 4 {I|L}{I|L}DEDNNK{I|L} 9 2 + 93.611 0.0 0.0 8.728 8.728 92.984 0.0 0.0 0.0 69.24865027867403 12.587418566968154 12.587418566968154 9.208187539523747 0 1.048455006504028 2.0 0.7059771852360797 1.0994850021680094 {I|L}{I|L}DEDNNK{I|L};{I|L}{I|L}DEDNGGK{I|L} 8.728;7.8694 -;- 301 + 1 1.821 74783.3 1.0 3083 4422 7504 HBL1_DMSO_200M_050219_2,7507 HBL1_DMSO_200M_050219_2,7507,LIDENDNKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7508 40.603 203.0 282390.0 25 0 24508.0 + 41547 VPPAPTATV 9 95 426.7446367001476 851.4747204670953 2 426.7449523806572 MULTI CID FTMS 0 0 0 7504 313532.0625 0.8208677743593906 5 -0.1655998229980468 4 Unmodified _VPPAPTATV_ ENSG00000156304|ENST00000286835|SCAF4;ENST00000467731.1_1_21:33057290-33073360:-|nuORF;nc|ENSG00000156304|O95104-2|SCAF4;nc|ENSG00000156304|O95104-3|SCAF4 44.40701690623563 0.0526327925666318 4 [TA]PP[PA]VTV 9 4 + 39.787 0.0 0.0 4.6728 4.6728 70.071 0.0 0.0 0.0 1.850550783663344 10.702317760907048 1.850550783663344 1.850550783663344 0 0.8807196863200843 0.6777807052660807 0.2887254899964357 0.0 [TA]PP[PA]VTV;[VP][PA][Q{I|L}]EV 4.6728;4.4554 -;- 104 1 1.821 48643.6 1.0 3084 4422 7504 HBL1_DMSO_200M_050219_2,7508 HBL1_DMSO_200M_050219_2,7508,VPPAPTATV True True VPPAPTATV 40.602518 426.744952380657 11245838.0 7504.0 nc|ENSG00000156304|O95104-3|SCAF4;;ENSG00000156304|ENST00000286835|SCAF4;;nc|ENSG00000156304|O95104-2|SCAF4;;ENST00000467731.1_1_21:33057290-33073360:-|nuORF 6.08072296778361 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7509 40.606 177.0 340580.0 25 0 39862.0 + 11532 GIPEKDLHSV 10 85 547.7950396986308 1093.5755264640616 2 547.7960693240166 MULTI CID FTMS 0 0 0 7504 263997.375 0.9532198853484428 -1 0.0591011047363281 5 Unmodified _GIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 36.506200033944 0.1944608063770638 4 {[VA]|[{I|L}G]}PEKD{I|L}HSV 10 0 + 60.144 0.0 0.0 5.4998 5.4998 86.38 0.0 0.0 0.0 21.27035331242574 11.572779458418708 11.572779458418708 14.49092531119419 0 0.2887254899964357 2.0 0.75 0.0 + + {[VA]|[{I|L}G]}PEKD{I|L}HSV;{[VA]|[{I|L}G]}PWW{I|L}HSV;[EP][PA]VEPSVAV;{[VA]|[{I|L}G]}[HS]VEPSVAV;[EP][{I|L}P]GEPSVAV;[EP][{I|L}P]WPSVAV;[EP][PA]VESPVAV;{[VA]|[{I|L}G]}[HS]VESPVAV;{[VA]|[{I|L}G]}[KC][HT]{I|L}HSV;[EP][{I|L}P]GESPVAV 5.4998;4.1747;3.9593;3.919;3.5955;3.4304;3.4088;3.3685;3.3327;3.0449 +;-;-;-;-;-;-;-;-;- + 381 + 1 1.821 51252.8 1.0 3085 4422 7504 HBL1_DMSO_200M_050219_2,7509 HBL1_DMSO_200M_050219_2,7509,GIPEKDLHSV False True GIPEKDLHSV 40.605972 547.796069324017 38869288.5 7504.0 ENST00000606952.5_1_1:156203463-156206310:+|nuORF;;ENSG00000160783|ENST00000368277|PMF1;;nc|ENSG00000160783|Q6P1K2-2|PMF1;;nc|ENSG00000160783|Q6P1K2-4|PMF1 7.551999727884929 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7510 40.609 171.0 423960.0 25 0 51719.0 + 3823 DAIRTSEI 8 96 452.7404594916384 903.4663660500768 2 452.7407104372978 MULTI CID FTMS 0 0 0 7504 189225.734375 0.0295444042397324 -7 0.522857666015625 6 Unmodified _DAIRTSEI_ ENSG00000143612|ENST00000368521|C1orf43;nc|nan|Q9BWL3-2|C1orf43;nc|nan|Q9BWL3-3|C1orf43 31.26834338654808 0.3863233259196171 4 {[DA]|[EG]}{I|L}RTSE{I|L} 8 0 + 40.812 0.0 0.0 4.5172 4.5172 80.638 0.0 0.0 0.0 10.62214796746474 20.244273272324588 10.62214796746474 9.597368199827445 0 1.242992819099939 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}{I|L}RTSE{I|L};{[DA]|[EG]}{I|L}R[WM]{I|L};[VS]{[WT]|[RM]}{I|L}GE{I|L};[VS]V[RD]SE{I|L};{[QN]|[E{I|L}]|[KN]}GRTSE{I|L};{[QN]|[E{I|L}]|[KN]}[KC]{I|L}W{I|L};{[QN]|[E{I|L}]|[KN]}[WK]SE{I|L};[VS]V[YT]A[PA]P;{[VA]|[{I|L}G]}ERTSE{I|L};{[QN]|[E{I|L}]|[KN]}[HA]VA[HQ] 4.5172;3.455;2.8115;2.7847;2.4165;2.317;2.2902;2.1507;1.89;1.6486 +;-;-;-;-;-;-;-;-;- + 265 1 1.821 59793.3 1.0 3086 4422 7504 HBL1_DMSO_200M_050219_2,7510 HBL1_DMSO_200M_050219_2,7510,DAIRTSEI False True DAIRTSEI 40.609301 452.740710437298 78470488.0 7504.0 nc|nan|Q9BWL3-2|C1orf43;;ENSG00000143612|ENST00000368521|C1orf43;;nc|nan|Q9BWL3-3|C1orf43 2.017270008722941 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7511 40.623 800.0 133790.0 25 0 13041.0 -1 0 107 698.3176052207377 697.3103287541377 1 698.3176147341728 MULTI CID FTMS 0 0 0 7504 188881.0625 1.0 0 0.0 7 4 [YT]VNAM 6 -1 + 81.13 0.0 0.0 11.635 11.635 97.319 0.0 0.0 0.0 19.832881222565256 45.14387776570936 19.832881222565256 16.92008053022313 0 1.3283409326844269 1.6989700043360187 0.7951140161145329 0.75 [YT]VNAM;[YT]VGGAM;[YV]TNAM;[YT]GQVM;{[QG]|[NA]}VTYM;{[QG]|[NA]}[YT]VM;[YV]NTAM;{[NV]|[RG]}YTAM;[YV]TGGAM;{[DA]|[EG]}[YK]AM 11.635;9.2083;8.2288;7.5593;6.4875;6.2488;6.1272;5.8516;5.8023;5.4175 -;-;-;-;-;-;-;-;-;- 624 1 1.821 80130.6 0.7400000095367432 3087 4422 7504 HBL1_DMSO_200M_050219_2,7511 HBL1_DMSO_200M_050219_2,7511, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7512 40.629 336.0 242600.0 25 0 15403.0 + 21876 LPPESTQV 8 125 435.7319671401997 869.4493813471995 2 435.7323181033134 MULTI CID FTMS 0 0 0 7504 165309.484375 0.5088673435591562 -34 1.6400871276855469 8 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 26.34127834903884 0.4900704351052977 4 [{I|L}P]PES 5 3 21.497 0.0 0.0 2.4725 0.0 0.0 0.0 343.16163655643703 343.16163655643703 -0.5734154673554634 0.0 -0.5734154673554634 0.0 0 0.0 1.6989700043360187 0.5 0.0 + [{I|L}P]PES 2.4725 + + 234 1 1.821 64615.1 1.0 3088 4422 7504 HBL1_DMSO_200M_050219_2,7512 HBL1_DMSO_200M_050219_2,7512,LPPESTQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7513 40.639 557.0 259220.0 25 0 28707.0 + 40209 VGRAVLVEAE 10 175 348.2016028268117 0 348.2014343142509 PEAK CID FTMS 0 0 0 7504 123142.7421875 0.532309647188314 -23 1.0856208801269531 9 Unmodified _VGRAVLVEAE_ REV__ENSG00000132692|ENST00000329117|BCAN;REV__nc|ENSG00000132692|Q96GW7-2|BCAN 3.944395688203298 0.3961065659209837 4 {M(Oxidation (M))|F} 1 -1 6.3515 0.0 0.0 0.91469 0.0 0.0 200.14022239991408 344.1517428033813 544.2919652032954 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.91469 - 18 + 1 1.821 117791.5 1.0 3089 4422 7504 HBL1_DMSO_200M_050219_2,7513 HBL1_DMSO_200M_050219_2,7513,VGRAVLVEAE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7515 40.644 2.9 13192000.0 25 0 1754700.0 + -1 GEVMSEMNL 9 60 513.2171555276142 1024.4197581220285 2 513.2182494997978 MULTI CID FTMS 0 0 0 7514 18407170.0 0.6981530122443234 2 -0.0581855773925781 1 Oxidation (M) _GEVM(Oxidation (M))SEMNL_ REV__ENSG00000083307|ENST00000646743|GRHL2;REV__nc|ENSG00000083307|Q6ISB3-2|GRHL2 15.847184025352805 0.4077185912009129 4 {[DA]|[EG]}VV 4 -1 33.672 0.0 0.0 3.2869 0.0 0.0 0.0 637.1929569347814 637.1929569347814 -0.9813624419633272 0.0 -0.9813624419633272 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}VV 3.2869 - 31 1 1.823 33596.9 1.0 3090 4423 7514 HBL1_DMSO_200M_050219_2,7515 HBL1_DMSO_200M_050219_2,7515,GEVMSEMNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7516 40.645 33.0 1329300.0 25 0 78996.0 11311 GEVPNGYNV 9 76 474.7263455494248 947.4381381656495 2 474.7266418337822 MULTI CID FTMS 0 0 0 7514 1027594.3125 0.3192780697924409 5 -0.1633987426757812 2 Unmodified _GEVPNGYNV_ nc|ENSG00000211706|A0A0K0K1D8|TRBV6-1;nc|ENSG00000211721|A0A0K0K1A5|TRBV6-5;nc|ENSG00000211724|A0A0A6YYG2|TRBV6-6;nc|ENSG00000253188|A0A0A0MS04|TRBV6-7 21.74664581756881 0.2544899275067181 4 {[SA]|[TG]}GAM 5 7 21.343 0.0 0.0 2.2527 0.0 0.0 0.0 527.2448757967621 527.2448757967621 0.4353478007761957 0.0 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 {[SA]|[TG]}GAM 2.2527 - 113 1 1.823 40406.7 1.0 3091 4423 7514 HBL1_DMSO_200M_050219_2,7516 HBL1_DMSO_200M_050219_2,7516,GEVPNGYNV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7517 40.646 75.0 674580.0 25 0 123800.0 + 41747 VPTDPPRTI 9 67 498.2802641779709 994.5459754227418 2 498.2799560427666 MULTI CID FTMS 0 0 0 7514 576068.1875 0.077368585169271 8 -0.3896446228027344 3 Unmodified _VPTDPPRTI_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 19.361941925380144 0.3125782356748823 4 VPTDP 5 4 63.756 0.0 0.0 6.4105 0.0 0.0 0.0 482.2732637994751 482.2732637994751 39.49092531119419 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + VPTDP 6.4105 + + 41 + 1 1.823 45433.4 1.0 3092 4423 7514 HBL1_DMSO_200M_050219_2,7517 HBL1_DMSO_200M_050219_2,7517,VPTDPPRTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7518 40.649 99.0 360940.0 25 0 22723.0 + -1 SRPDSILGMQF 11 65 633.8108642971252 1265.6071756610504 2 633.8112670779228 MULTI CID FTMS 0 0 0 7514 548328.3125 0.1215463974370839 5 -0.1633987426757812 4 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 20.41453444215458 0.6105011870913812 4 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 58.919 0.0 0.0 4.6554 4.6554 67.376 0.0 0.0 0.0 0.5237875363565792 2.9794656189555013 0.5237875363565792 0.5237875363565792 0 0.9489700043360187 0.0 0.0 2.004432191740108 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[RV]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[RV]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 4.6554;4.614;3.9313;3.9313;3.8899;3.8899;3.21;3.1687;2.8615;2.1374 -;-;-;-;-;-;-;-;-;- 282 1 1.823 37260.1 1.0 3093 4423 7514 HBL1_DMSO_200M_050219_2,7518 HBL1_DMSO_200M_050219_2,7518,SRPDSILGMQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7519 40.65 77.0 738560.0 25 0 77450.0 + 31435 RPPPPNSVI 9 97 488.782987973846 975.551423014492 2 488.7824890017509 MULTI CID FTMS 0 0 0 7514 481672.25 0.8856711409395973 1 -0.0248451232910156 5 Unmodified _RPPPPNSVI_ ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1 36.12702656103203 0.0967173616627612 4 {[VA]|[{I|L}G]}VT[C(Carbamidomethyl (C))K]SV 8 7 51.639 0.0 0.0 5.2934 0.0 0.0 0.0 128.0720278331045 128.0720278331045 35.709522437012886 0.0 0.0 0.0 0 1.0021934810768762 1.6989700043360187 0.8252574989159953 0.0 {[VA]|[{I|L}G]}VT[C(Carbamidomethyl (C))K]SV 5.2934 - 283 1 1.823 48996.2 1.0 3094 4423 7514 HBL1_DMSO_200M_050219_2,7519 HBL1_DMSO_200M_050219_2,7519,RPPPPNSVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7520 40.654 177.0 385710.0 25 0 37462.0 + 32536 SAMSAAKAI 9 98 425.2284371183992 0 425.2284423708916 PEAK CID FTMS 0 0 0 7514 347248.28125 0.9388666525621926 -1 0.0533638000488281 6 Unmodified _SAMSAAKAI_ ENSG00000014641|ENST00000233114|MDH1;nc|ENSG00000014641|P40925-2|MDH1;nc|ENSG00000014641|P40925-3|MDH1 41.8396318013385 0.053988301646488 4 MSAAK 5 4 20.165 0.0 0.0 2.3767 0.0 0.0 158.06464903972966 199.1092928522094 357.1739418919391 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + MSAAK 2.3767 + + 124 + 1 1.823 56212.2 1.0 3095 4423 7514 HBL1_DMSO_200M_050219_2,7520 HBL1_DMSO_200M_050219_2,7520,SAMSAAKAI True True SAMSAAKAI 40.653805 425.228442370892 2063203.5 7514.0 ENSG00000014641|ENST00000233114|MDH1;;nc|ENSG00000014641|P40925-3|MDH1;;nc|ENSG00000014641|P40925-2|MDH1 5.098134517669678 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7521 40.657 136.0 649560.0 25 0 59065.0 12663 GVLKLRLCEL 10 99 381.9019863301553 1142.684129590666 3 381.9022399783134 MULTI CID FTMS 0 0 0 7514 185463.484375 0.4180266889620564 -2 0.1124649047851562 7 Unmodified _GVLKLRLCEL_ ENSG00000180481|ENST00000550916|GLIPR1L2;nc|ENSG00000180481|Q4G1C9-2|GLIPR1L2;nc|ENSG00000180481|Q4G1C9-3|GLIPR1L2;nc|ENSG00000180481|Q4G1C9-4|GLIPR1L2 6.630372943996041 0.695967137280542 4 K{I|L}K[EP]E 6 7 18.505 0.0 0.0 1.6194 0.0 0.0 400.27949721504064 0.0 400.27949721504064 0.0 6.51531887048947 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[EP]E 1.6194 - 75 1 1.823 74550.4 1.0 3096 4423 7514 HBL1_DMSO_200M_050219_2,7521 HBL1_DMSO_200M_050219_2,7521,GVLKLRLCEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7522 40.664 409.0 327460.0 25 0 39326.0 + 22218 LPRDHPAVI 9 120 509.2941670899621 1016.5737812467244 2 509.2946960330009 MULTI CID FTMS 0 0 0 7514 167684.625 0.52956803935964 -2 0.1124649047851562 8 Unmodified _LPRDHPAVI_ ENSG00000173653|ENST00000309657|RCE1;ENST00000534822.1_1_11:66611010-66611365:+|nuORF 39.94969957227396 0.0757326808254658 4 [PA]V[DV]HPAV{I|L} 10 3 + 69.218 0.0 0.0 6.809 6.809 78.364 0.0 0.0 0.0 11.461280356782382 16.53212513775344 11.461280356782382 1.7609125905568137 0 1.0 1.3979400086720375 0.7614393726401688 0.0 [PA]V[DV]HPAV{I|L};[PA]V[DV]HAPV{I|L};[{I|L}P]G[DV]HPAV{I|L};[{I|L}P]G[DV]HAPV{I|L};[PA]G[KQ]HPAV{I|L};[{I|L}P][RD]HPAV{I|L};[PA]{[QN]|[E{I|L}]|[KN]}[HA]PAV{I|L};[PA]G[KQ]HAPV{I|L};[{I|L}P][RD]HAPV{I|L};[PA]V[RH]EPV{I|L} 6.809;6.6358;5.6815;5.5083;5.3724;5.3351;5.2606;5.1992;5.1619;5.1268 -;-;-;-;-;+;-;-;-;- + 1016 1 1.823 111389.3 1.0 3097 4423 7514 HBL1_DMSO_200M_050219_2,7522 HBL1_DMSO_200M_050219_2,7522,LPRDHPAVI True True LPRDHPAVI 40.663841 509.294696033001 5157228.375 7514.0 ENST00000534822.1_1_11:66611010-66611365:+|nuORF;;ENSG00000173653|ENST00000309657|RCE1 3.569799264272054 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7524 40.68 800.0 223560.0 25 0 12758.0 7483 EGTWATSEEP 10 188 553.7341080887991 1105.453663244398 2 553.7345458865166 MULTI CID FTMS 0 0 0 7523 128609.828125 0.2717736085940251 -4 0.1866035461425781 1 Unmodified _EGTWATSEEP_ ENSG00000182872|ENST00000377604|RBM10;nc|ENSG00000182872|P98175-2|RBM10;nc|ENSG00000182872|P98175-3|RBM10;nc|ENSG00000182872|P98175-4|RBM10;nc|ENSG00000182872|P98175-5|RBM10 24.020572477871973 0.4289996903560794 4 {[DA]|[EG]}TSQ{I|L}[MD]EP 10 5 + 68.419 0.0 0.0 6.1892 6.1892 88.822 0.0 0.0 0.0 42.84553100232623 5.22679741976512 5.22679741976512 13.411964496339294 0 0.8494850021680094 2.0 1.0356668758921828 0.4247425010840047 {[DA]|[EG]}TSQ{I|L}[MD]EP;{[DA]|[EG]}TS[AG]{I|L}[MD]EP;{[DA]|[EG]}TSQ[C(Carbamidomethyl (C))R]DGP;{[DA]|[EG]}C(Carbamidomethyl (C))R{I|L}[MD]EP;{[DA]|[EG]}TS[AG][C(Carbamidomethyl (C))R]DGP;{[DA]|[EG]}GCR{I|L}[MD]EP;{[DA]|[EG]}TS{[YC]|[HE]}[HV]NP;{[DA]|[EG]}T[HQ]WWY;{[DA]|[EG]}TS{[YC]|[HE]}[RH]GP;{[DA]|[EG]}TS{[YC]|[HE]}[HV]GGP 6.1892;4.976;4.1685;3.9408;3.3394;3.1366;3.0398;2.8796;2.8676;1.9013 -;-;-;-;-;-;-;-;-;- 2110 + 1 1.823 137035.0 0.6100000143051147 3098 4424 7523 HBL1_DMSO_200M_050219_2,7524 HBL1_DMSO_200M_050219_2,7524,EGTWATSEEP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7525 40.683 175.0 694250.0 25 0 97243.0 2125 APVNAKPHAL 10 86 339.86641182597054 1016.5774060781116 3 339.8660461306572 MULTI CID FTMS 0 0 0 7523 487270.3125 0.904191161888238 -1 0.0248451232910156 2 Unmodified _APVNAKPHAL_ ENSG00000188315|ENST00000343010|C3orf62 12.531546534597751 0.6372748319968624 4 [PA]V[DV]H 6 6 20.679 0.0 0.0 2.0342 0.0 0.0 0.0 395.229877124718 395.229877124718 -0.7525749891599531 0.0 -0.7525749891599531 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.0 [PA]V[DV]H 2.0342 - 56 1 1.823 109840.8 1.0 3099 4424 7523 HBL1_DMSO_200M_050219_2,7525 HBL1_DMSO_200M_050219_2,7525,APVNAKPHAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7526 40.697 800.0 142410.0 25 0 9301.1 + 18479 KYLDAEQSY 9 152 558.7641473167312 1115.5137417002622 2 558.7639037966728 MULTI CID FTMS 0 0 0 7523 115538.3203125 0.904134308916965 -2 0.0782089233398437 3 Unmodified _KYLDAEQSY_ ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF 66.45667989310934 0.0225072657982126 4 {[QS]|[NT]}Y[{I|L}V]EQSY 9 4 + 66.079 0.0 0.0 5.9237 5.9237 81.835 0.0 0.0 0.0 6.262490244606809 16.47817481888638 6.262490244606809 6.262490244606809 0 1.0 0.6989700043360187 1.5626432252195628 0.8391368308784531 {[QS]|[NT]}Y[{I|L}V]EQSY;[YK]{I|L}DAEQSY;{[QS]|[NT]}V[Y{I|L}]EQSY;[AG]SY[{I|L}V]EQSY;[Y{I|L}]KDAEQSY;{[QS]|[NT]}Y[{I|L}V]E[AG]SY;[AG]SV[Y{I|L}]EQSY;{[DA]|[EG]}K[Y{I|L}]EQSY;{[DA]|[EG]}{I|L}[YK]EQSY;{[{M(Oxidation (M))|F}C]|[YS]}Q[{I|L}V]EQSY 5.9237;5.3623;5.3211;5.2539;5.2234;5.0982;4.8971;4.8477;4.7767;4.7717 -;+;-;-;-;-;-;-;-;- + 1259 1 1.823 87080.8 0.6200000047683716 3100 4424 7523 HBL1_DMSO_200M_050219_2,7526 HBL1_DMSO_200M_050219_2,7526,KYLDAEQSY True True KYLDAEQSY 40.697201 558.763903796673 854900.5625 7523.0 ENSG00000141452|ENST00000269221|RMC1;;ENST00000589215.5_1_18:21087981-21111645:+|nuORF 6.871780077616374 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7528 40.713 800.0 136030.0 25 0 11217.0 + -1 IMFEDPEEK 9 140 590.2663733565205 1178.5181937798409 2 590.2673217654228 MULTI CID FTMS 0 0 0 7527 68658.6171875 0.0238297878825031 9 -0.4363136291503906 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))IMFEDPEEK_ REV__ENSG00000145309|ENST00000273936|CABS1 14.838274106304384 0.4350285940865338 4 NVSMGDAAEK 10 -1 45.576 0.0 0.0 3.8672 0.0 0.0 158.06953627754064 0.0 158.06953627754064 0.0 27.49359510617246 0.0 0.0 0 1.174742501084005 0.0 0.0 0.3252574989159953 NVSMGDAAEK 3.8672 - 983 1 1.823 83591.7 0.6100000143051147 3101 4425 7527 HBL1_DMSO_200M_050219_2,7528 HBL1_DMSO_200M_050219_2,7528,IMFEDPEEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7529 40.715 68.0 839240.0 25 0 91060.0 + -1 KYISGPHEL 9 92 521.9928466066749 3646.898990980524 7 522.2800170779228 MULTI CID FTMS 0 0 0 7527 534863.6875 0.3422579987202048 -4 0.1706504821777343 2 ENSG00000117724|ENST00000366955|CENPF 4 [YK]{I|L}{M(Oxidation (M))|F}S{I|L}Y 7 -1 31.713 0.0 0.0 0.86958 0.0 0.0 0.0 2729.425668603851 2729.425668603851 11.424456981286175 0.0 0.0 0.0 0 0.0 0.0 0.75 0.4247425010840047 [YK]{I|L}{M(Oxidation (M))|F}S{I|L}Y 0.86958 - 237 1 1.823 51413.9 1.0 3102 4425 7527 HBL1_DMSO_200M_050219_2,7529 HBL1_DMSO_200M_050219_2,7529, False False KYISGPHEL 40.714948 522.280017077923 25720126.5 7527.0 ENSG00000117724|ENST00000366955|CENPF 5.921317418416341 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7530 40.718 163.0 525410.0 25 0 51362.0 + 41132 VPAAPTPGRV 10 89 482.78254305279614 963.5505331723924 2 482.7822448611259 MULTI CID FTMS 0 0 0 7527 359308.375 0.2769154130027175 -10 0.6344070434570312 3 Unmodified _VPAAPTPGRV_ REV__ENST00000372583.5_1_1:42049420-42049822:-|nuORF 21.74664581756881 0.480091245866545 4 [PA]APVC(Carbamidomethyl (C)) 6 -1 56.401 0.0 0.0 5.8534 0.0 0.0 0.0 365.25583826236567 365.25583826236567 35.45880017344075 0.0 0.0 0.0 0 1.25 1.6989700043360187 0.0 0.0 [PA]APVC(Carbamidomethyl (C)) 5.8534 - 221 + 1 1.823 71813.0 1.0 3103 4425 7527 HBL1_DMSO_200M_050219_2,7530 HBL1_DMSO_200M_050219_2,7530,VPAAPTPGRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7531 40.724 345.0 398140.0 25 0 43437.0 + 18472 KYISGPHEL 9 151 348.522414907416 1042.545415322448 3 348.5221435427666 MULTI CID FTMS 0 0 0 7527 205618.796875 0.4761003096916108 -3 0.1115493774414062 4 Unmodified _KYISGPHEL_ ENSG00000117724|ENST00000366955|CENPF 39.94969957227396 0.0757326808254658 4 [YK]{I|L}{M(Oxidation (M))|F}S 5 6 22.945 0.0 0.0 2.2009 0.0 0.0 0.0 401.2179366449668 401.2179366449668 12.667725954474829 0.0 0.0 0.0 0 0.0 0.0 0.5 0.3252574989159953 [YK]{I|L}{M(Oxidation (M))|F}S 2.2009 - 142 1 1.823 113885.7 1.0 3104 4425 7527 HBL1_DMSO_200M_050219_2,7531 HBL1_DMSO_200M_050219_2,7531,KYISGPHEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7532 40.736 680.0 333050.0 25 0 24202.0 + 32479 SAIRRLKEL 9 187 362.5647781665612 1084.6725050998834 3 362.5642883181572 MULTI CID FTMS 0 0 0 7527 165209.40625 0.5193936259616007 -4 0.1706504821777343 5 Unmodified _SAIRRLKEL_ ENSG00000197756|ENST00000491306|RPL37A;ENST00000420712.1_1_2:217364102-217366124:+|nuORF;ENST00000494116.1_1_11:111759925-111760129:-|nuORF;nc|ENSG00000176343|A6NKH3|RPL37AP8 35.61225514009592 0.0995432151795903 4 {I|L}KE{I|L} 4 5 29.457 0.0 0.0 2.7157 0.0 0.0 583.356406536194 0.0 583.356406536194 0.0 14.852678516200797 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.3494850021680094 + {I|L}KE{I|L} 2.7157 + + 121 1 1.823 180287.8 1.0 3105 4425 7527 HBL1_DMSO_200M_050219_2,7532 HBL1_DMSO_200M_050219_2,7532,SAIRRLKEL True True SAIRRLKEL 40.736211 362.564288318157 2563263.75 7527.0 ENST00000420712.1_1_2:217364102-217366124:+|nuORF;;nc|ENSG00000176343|A6NKH3|RPL37AP8;;ENSG00000197756|ENST00000491306|RPL37A;;ENST00000494116.1_1_11:111759925-111760129:-|nuORF 3.691021283467611 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7534 40.741 7.5 6696300.0 25 0 680360.0 + 24977 MPPPPPQGV 9 74 460.23852327962805 918.462493626056 2 460.2390319705009 MULTI CID FTMS 0 0 0 7533 7474619.0 0.4033347963845978 -32 1.610004425048828 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 74.39630413441286 0.0193995060682538 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 46.392 0.0 0.0 5.051 5.051 72.563 0.0 0.0 0.0 2.451818904348144 2.451818904348144 2.451818904348144 2.451818904348144 0 1.9436726795685344 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;{[HG]|PP}NNPPQR;[VG][EP]HPQR;[PS][HT]PPQR;[PS][TP]HPQR;{[HG]|PP}GGNPPQR;{[HG]|PP}NGGPPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQGV;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR 5.051;4.7841;3.4538;3.4227;3.404;2.6617;2.4454;2.4454;2.3152;1.9105 -;+;-;-;-;-;-;-;-;- + 251 1 1.823 45556.6 1.0 3106 4426 7533 HBL1_DMSO_200M_050219_2,7534 HBL1_DMSO_200M_050219_2,7534,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7535 40.751 599.0 309440.0 25 0 22836.0 + 44972 YPRHKHLLI 9 162 392.90476717081424 1175.6924721126427 3 392.9046508669853 MULTI CID FTMS 0 0 0 7533 150059.234375 0.6758903116784972 3 -0.1328201293945312 2 Unmodified _YPRHKHLLI_ ENSG00000132912|ENST00000447998|DCTN4;nc|ENSG00000132912|Q9UJW0-2|DCTN4;nc|ENSG00000132912|Q9UJW0-3|DCTN4 36.506200033944 0.094635877243972 4 KH{I|L}{I|L}{I|L} 5 4 39.748 0.0 0.0 3.3808 0.0 0.0 553.2762928693375 0.0 553.2762928693375 0.0 29.0343858209858 0.0 0.0 0 0.8778623208748889 0.0 0.0 0.6505149978319906 + KH{I|L}{I|L}{I|L} 3.3808 + + 382 1 1.823 145821.2 1.0 3107 4426 7533 HBL1_DMSO_200M_050219_2,7535 HBL1_DMSO_200M_050219_2,7535,YPRHKHLLI True True YPRHKHLLI 40.751257 392.9052 4167143.75 7533.0 nc|ENSG00000132912|Q9UJW0-2|DCTN4;;nc|ENSG00000132912|Q9UJW0-3|DCTN4;;ENSG00000132912|ENST00000447998|DCTN4 4.221933762232463 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7537 40.756 7.1 8489100.0 25 0 1061200.0 + 1674 ALPDQGIAKA 10 67 492.2802795309003 982.5460061286008 2 492.2800781130791 MULTI CID FTMS 0 0 0 7536 8453618.0 0.8471787442527989 -1 0.0149879455566406 1 Unmodified _ALPDQGIAKA_ ENSG00000089289|ENST00000356413|IGBP1 43.77239144664712 0.1177314611616471 4 [{I|L}A]PDQG{I|L}AKA 10 0 + 60.583 0.0 0.0 6.166 6.166 85.527 0.0 0.0 0.0 7.83137116318585 9.208187539523747 7.83137116318585 9.164539485499256 0 0.8182503180159344 2.0 0.0 0.3807196863200844 + + [{I|L}A]PDQG{I|L}AKA;[{I|L}A]PD[AG]G{I|L}AKA;[{I|L}A]PDQ[Q{I|L}]KA;[{I|L}A]PD[AG][Q{I|L}]KA;[DP]QGRR[RV];[DP][AG]GRR[RV] 6.166;5.2332;5.1006;4.1635;2.5052;1.5625 +;-;-;-;-;- + 152 + 1 1.823 53104.7 1.0 3108 4427 7536 HBL1_DMSO_200M_050219_2,7537 HBL1_DMSO_200M_050219_2,7537,ALPDQGIAKA True True ALPDQGIAKA 40.755782 492.280078113079 187537416.0 7536.0 ENSG00000089289|ENST00000356413|IGBP1 9.212637901306152 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7538 40.758 95.0 609200.0 25 0 77769.0 + 11529 GIPEKDLHSV 10 88 365.53319332565394 1093.577750577162 3 365.5327636599541 MULTI CID FTMS 0 0 0 7536 377569.9375 0.7417160203207278 6 -0.3621978759765625 2 Unmodified _GIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 26.268140514670165 0.3785003716575977 4 {[VA]|[{I|L}G]}PE 4 6 42.99 0.0 0.0 3.9311 0.0 0.0 0.0 694.3527367384416 694.3527367384416 16.523722004121453 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.805462187404089 0.0 + {[VA]|[{I|L}G]}PE 3.9311 + + 138 + 1 1.823 55769.3 1.0 3109 4427 7536 HBL1_DMSO_200M_050219_2,7538 HBL1_DMSO_200M_050219_2,7538,GIPEKDLHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7539 40.761 149.0 592110.0 25 0 39909.0 + 6139 DSYRKQVVI 9 107 554.3113820102004 1106.6082110872007 2 554.3118774294853 MULTI CID FTMS 0 0 0 7536 492994.90625 0.3128400554582944 -3 0.0873908996582031 3 Unmodified _DSYRKQVVI_ ENSG00000133703|ENST00000311936|KRAS;ENSG00000174775|ENST00000311189|HRAS;ENSG00000213281|ENST00000369535|NRAS;nc|ENSG00000133703|P01116|KRAS;nc|ENSG00000174775|P01112-2|HRAS 24.99096001346401 0.2132109383330889 4 KQVV{I|L} 5 4 33.884 0.0 0.0 3.062 0.0 0.0 521.2250843732437 0.0 521.2250843732437 0.0 6.947037775157071 0.0 0.0 0 0.6171302707394362 0.0 0.0 0.0 + KQVV{I|L} 3.062 + + 254 1 1.823 74987.2 1.0 3110 4427 7536 HBL1_DMSO_200M_050219_2,7539 HBL1_DMSO_200M_050219_2,7539,DSYRKQVVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7540 40.763 91.0 497390.0 25 0 45103.0 + 4423 DAVTQETRI 9 81 516.7700510162625 1031.525549099325 2 516.7696411013603 MULTI CID FTMS 0 0 0 7536 484666.75 0.9769126939649974 -1 0.0149879455566406 4 Unmodified _DAVTQETRI_ ENSG00000100578|ENST00000652326|KIAA0586;ENST00000538571.6_1_14:58909433-59003756:+|nuORF;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-3|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586 34.93206674587334 0.1032771302489716 4 {[DA]|[EG]}VTQE 6 3 66.643 0.0 0.0 6.4606 0.0 0.0 0.0 385.2213228815063 385.2213228815063 53.81228130928562 0.0 0.0 0.0 0 1.3494850021680094 1.6989700043360187 0.4247425010840047 0.3494850021680094 + {[DA]|[EG]}VTQE 6.4606 + + 72 + 1 1.823 40984.7 1.0 3111 4427 7536 HBL1_DMSO_200M_050219_2,7540 HBL1_DMSO_200M_050219_2,7540,DAVTQETRI True True DAVTQETRI 40.762827 516.76964110136 2572630.25 7536.0 ENSG00000100578|ENST00000652326|KIAA0586;;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;;nc|ENSG00000100578|Q9BVV6-3|KIAA0586;;nc|ENSG00000100578|Q9BVV6|KIAA0586;;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;;ENST00000538571.6_1_14:58909433-59003756:+|nuORF 5.479645729064941 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7541 40.766 180.0 553410.0 25 0 44342.0 27825 PLPWQQRSL 9 98 375.5438403944079 1123.6096917834236 3 375.5438110232353 MULTI CID FTMS 0 0 0 7536 303058.03125 0.10415198371966 -6 0.224700927734375 5 Unmodified _PLPWQQRSL_ ENST00000448404.5_1_11:64532928-64535069:-|nuORF;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-5|SF1 22.65808497894818 0.2428932432760099 4 SGVG[KC]SRS{I|L} 10 7 53.524 0.0 0.0 4.7635 0.0 0.0 131.09311359037002 0.0 131.09311359037002 0.0 42.55449080957064 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.7614393726401688 SGVG[KC]SRS{I|L} 4.7635 - 537 + 1 1.823 84186.4 1.0 3112 4427 7536 HBL1_DMSO_200M_050219_2,7541 HBL1_DMSO_200M_050219_2,7541,PLPWQQRSL False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 7542 40.77 192.0 520370.0 25 0 78070.0 -1 0 111 352.1869730473215 351.1796965807215 1 352.1864501833916 MULTI CID FTMS 0 0 0 7536 248193.921875 0.649205875496292 -3 0.0873908996582031 6 4 [VS]{M(Oxidation (M))|F} 3 -1 + 40.942 0.0 0.0 11.658 11.658 91.525 0.0 0.0 0.0 2.2577249674798594 2.2577249674798594 2.2577249674798594 7.143232132484307 0 0.3494850021680094 2.0 0.0 0.0 [VS]{M(Oxidation (M))|F};YG{I|L};[YG]{I|L} 11.658;9.6244;8.9392 -;-;- 20 1 1.823 84662.6 1.0 3113 4427 7536 HBL1_DMSO_200M_050219_2,7542 HBL1_DMSO_200M_050219_2,7542, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7543 40.784 800.0 157440.0 25 0 15632.0 + 29216 QGLEMPGYDC 10 143 556.7239557242488 1111.4333585152974 2 556.7254516482353 MULTI CID FTMS 0 0 0 7536 151900.953125 0.2392888300647436 -3 0.0873908996582031 7 Unmodified _QGLEMPGYDC_ REV__ENST00000475441.5_1_1:28905145-28906492:-|nuORF;REV__nc|ENSG00000197989|Q9BXW3|SNHG12 24.020572477871973 0.4289996903560794 4 {[QG]|[NA]}{I|L}ET{M(Oxidation (M))|F}P 7 -1 58.064 0.0 0.0 5.2243 0.0 0.0 0.0 336.06989465885005 336.06989465885005 43.622279031934994 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.5 0.0 {[QG]|[NA]}{I|L}ET{M(Oxidation (M))|F}P 5.2243 - 271 + 1 1.823 97711.0 0.6899999976158142 3114 4427 7536 HBL1_DMSO_200M_050219_2,7543 HBL1_DMSO_200M_050219_2,7543,QGLEMPGYDC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7544 40.789 257.0 545740.0 25 0 65603.0 -1 MPPQPGMPA 9 112 471.213353942924 940.412154952648 2 471.2141601443291 MULTI CID FTMS 0 0 0 7536 131224.375 1.0 0 0.0 8 Oxidation (M) _MPPQPGM(Oxidation (M))PA_ ENSG00000164054|ENST00000296444|SHISA5;ENST00000460758.1_1_3:48510739-48511042:-|nuORF;ENST00000465449.5_1_3:48510508-48514931:-|nuORF;ENST00000466424.5_1_3:48509548-48511229:-|nuORF;ENST00000494854.5_1_3:48510739-48514492:-|nuORF;ENST00000497863.1_1_3:48510508-48511042:-|nuORF;nc|ENSG00000164054|Q8N114-2|SHISA5;nc|ENSG00000164054|Q8N114-3|SHISA5;nc|ENSG00000164054|Q8N114-4|SHISA5;nc|ENSG00000164054|Q8N114-5|SHISA5 9.347437153973935 0.588369872918737 4 {M(Oxidation (M))|F} 1 -1 15.485 0.0 0.0 1.6466 0.0 0.0 775.3657815169043 0.0 775.3657815169043 0.0 4.569400253826784 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.6466 + + 67 + 1 1.823 113666.4 1.0 3115 4427 7536 HBL1_DMSO_200M_050219_2,7544 HBL1_DMSO_200M_050219_2,7544,MPPQPGMPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7545 40.802 800.0 151570.0 25 0 11390.0 26775 PAGPAIRPT 9 139 440.256455867947 878.498358802694 2 440.2563659548759 MULTI CID FTMS 0 0 0 7536 111230.671875 1.0 0 0.0 9 Unmodified _PAGPAIRPT_ ENST00000464902.5_1_2:220071908-220072061:+|nuORF 13.50788311687929 0.4710407108020397 4 PAV 3 7 26.7 0.0 0.0 3.0392 0.0 0.0 182.06901757485463 426.2480504898737 608.3170680647283 0.0 0.0 0.0 0.0 0 1.2887254899964358 0.0 0.0 0.0 PAV 3.0392 - 137 + 1 1.823 99982.6 0.5099999904632568 3116 4427 7536 HBL1_DMSO_200M_050219_2,7545 HBL1_DMSO_200M_050219_2,7545,PAGPAIRPT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7547 40.807 30.0 1737900.0 25 0 448490.0 + 38836 TVIAKVNNV 9 80 479.29005932322207 956.5655657132442 2 479.2902099490166 MULTI CID FTMS 0 0 0 7546 1707984.375 0.5498949298289981 3 -0.2262458801269531 1 Unmodified _TVIAKVNNV_ ENSG00000113407|ENST00000265112|TARS1;nc|ENSG00000113407|P26639-2|TARS1 48.345845343767074 0.0439967357579942 4 {[TV]|[{I|L}S]}{I|L}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}N 8 4 58.99 0.0 0.0 6.1668 0.0 0.0 0.0 82.0669420831664 82.0669420831664 45.26084705832169 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 1.1549471895720984 {[TV]|[{I|L}S]}{I|L}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}N 6.1668 - 377 + 1 1.825 47251.7 1.0 3117 4428 7546 HBL1_DMSO_200M_050219_2,7547 HBL1_DMSO_200M_050219_2,7547,TVIAKVNNV True True TVIAKVNNV 40.807017 479.290209949017 36050996.0 7546.0 ENSG00000113407|ENST00000265112|TARS1;;nc|ENSG00000113407|P26639-2|TARS1 5.304883559544881 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7548 40.821 800.0 193880.0 25 0 8811.1 6725 EDKRQDMANAF 11 115 662.799511531029 1323.584470128858 2 662.7993041872978 MULTI CID FTMS 0 0 0 7546 213705.875 0.4251704110319437 -2 0.0661506652832031 2 Unmodified _EDKRQDMANAF_ ENSG00000062598|ENST00000290246|ELMO2;ENST00000480042.5_1_20:45008831-45014791:-|nuORF;nc|ENSG00000062598|Q96JJ3-3|ELMO2 31.26834338654808 0.3580123756476716 4 {[QG]|[NA]}GA{M(Oxidation (M))|F}EGAQQNA{M(Oxidation (M))|F} 13 9 + 113.64 0.0 0.0 8.5857 8.5857 79.673 0.0 0.0 0.0 0.384676136202728 16.642078980768062 0.384676136202728 0.384676136202728 0 1.3812033112643842 1.3010299956639813 0.6549471895720984 1.9802046884880933 {[QG]|[NA]}GA{M(Oxidation (M))|F}EGAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}WAQQNA{M(Oxidation (M))|F};[AG]NA{M(Oxidation (M))|F}EGAQQNA{M(Oxidation (M))|F};[AG]GGA{M(Oxidation (M))|F}EGAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}EGAQQNA{M(Oxidation (M))|F};[AG]GQ{M(Oxidation (M))|F}EGAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}EGA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}EGAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}EGAQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}WAQQGGA{M(Oxidation (M))|F} 8.5857;8.5566;8.2478;8.2182;8.1074;8.0021;7.9002;7.9002;7.9002;7.8669 -;-;-;-;-;-;-;-;-;- 9706 1 1.825 115654.0 0.5899999737739563 3118 4428 7546 HBL1_DMSO_200M_050219_2,7548 HBL1_DMSO_200M_050219_2,7548,EDKRQDMANAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7549 40.823 92.0 697080.0 25 0 211180.0 + 24949 MPPPPPQGV 9 73 468.2364995746263 0 468.2361328005791 PEAK CID FTMS 0 0 0 7546 319221.75 0.3995460667396416 -31 1.4422035217285156 3 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 42.96799951952854 0.0509020470942709 4 P 1 8 8.9794 0.0 0.0 0.96092 0.0 0.0 399.2111827235343 435.1713961236938 834.382578847228 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + P 0.96092 + + 53 + 1 1.825 54856.7 1.0 3119 4428 7546 HBL1_DMSO_200M_050219_2,7549 HBL1_DMSO_200M_050219_2,7549,MPPPPPQGV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7550 40.826 138.0 575900.0 25 0 35884.0 + 22064 LPPPPQQKI 9 77 509.3084386644216 1016.6023243956432 2 509.3085815310478 MULTI CID FTMS 0 0 0 7546 248857.625 0.0576984495741203 -6 0.2167625427246093 4 Unmodified _LPPPPQQKI_ ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 26.88365393820708 0.1891292719743517 4 {I|L}PPP 4 5 54.68 0.0 0.0 5.3787 0.0 0.0 0.0 609.3404635065061 609.3404635065061 32.2653551291414 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPP 5.3787 + + 608 + 1 1.825 73235.5 1.0 3120 4428 7546 HBL1_DMSO_200M_050219_2,7550 HBL1_DMSO_200M_050219_2,7550,LPPPPQQKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7551 40.833 417.0 403010.0 25 0 114270.0 + 31458 RPRGPEGVGSL 11 93 562.8120828691694 1123.6096128051388 2 562.8123657107353 MULTI CID FTMS 0 0 0 7546 245163.96875 0.2005669538650706 -5 0.1633987426757812 5 Unmodified _RPRGPEGVGSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 47.72431441374281 0.1302327715749751 4 {[MS]|[{M(Oxidation (M))|F}A]}GVG[WP]RP 9 9 37.303 0.0 0.0 3.3199 0.0 0.0 0.0 153.07839380435783 153.07839380435783 22.609849771020485 0.0 0.0 0.0 0 1.836696871556164 0.0 0.0 1.3494850021680094 {[MS]|[{M(Oxidation (M))|F}A]}GVG[WP]RP 3.3199 - 446 + 1 1.825 131672.2 1.0 3121 4428 7546 HBL1_DMSO_200M_050219_2,7551 HBL1_DMSO_200M_050219_2,7551,RPRGPEGVGSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7552 40.847 800.0 207130.0 25 0 12313.0 + 5683 DPHSFPRTV 9 166 528.2666773953116 1054.5188018574231 2 528.2670165896416 MULTI CID FTMS 0 0 0 7546 119418.515625 0.1298077961735736 -16 0.8835372924804688 6 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 51.629811660486645 0.0367964933207742 4 DPHS{M(Oxidation (M))|F}{[RE]|[WV]}T 8 2 69.844 0.0 0.0 6.6233 0.0 0.0 0.0 82.06696497134999 82.06696497134999 43.53486046496684 0.0 0.0 0.0 0 0.4247425010840047 1.154901959985743 1.4802046884880935 0.2614393726401688 DPHS{M(Oxidation (M))|F}{[RE]|[WV]}T 6.6233 - 2930 + 1 1.825 131203.9 0.6499999761581421 3122 4428 7546 HBL1_DMSO_200M_050219_2,7552 HBL1_DMSO_200M_050219_2,7552,DPHSFPRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7553 40.861 800.0 107820.0 25 0 8702.1 + 15610 IQAEPDNLARA 11 93 599.3155521536537 1196.6165513741073 2 599.3152343630791 MULTI CID FTMS 0 0 0 7546 111002.015625 1.0 0 0.0 7 Unmodified _IQAEPDNLARA_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1 67.08073823543168 0.0408645806987127 4 AEPDN{I|L}W 7 5 56.904 0.0 0.0 4.7554 0.0 0.0 241.14315607486785 127.08805261783438 368.2312086927022 0.0 0.0 0.0 0.0 0 1.924742501084005 0.0 0.4247425010840047 0.6989700043360187 AEPDN{I|L}W 4.7554 - 594 + 1 1.825 69966.4 0.6399999856948853 3123 4428 7546 HBL1_DMSO_200M_050219_2,7553 HBL1_DMSO_200M_050219_2,7553,IQAEPDNLARA True True IQAEPDNLARA 40.860762 599.315234363079 686948.9375 7546.0 ENSG00000171456|ENST00000375687|ASXL1;;ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant 6.234101931254069 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7554 40.869 469.0 551960.0 25 0 37846.0 + 28011 PMPPRTNE 8 144 471.2300881821903 940.4456234311806 2 471.2303954958916 MULTI CID FTMS 0 0 0 7546 84818.7578125 0.1121104398015073 -33 1.6271934509277344 8 Unmodified _PMPPRTNE_ REV__ENSG00000101203|ENST00000358894|COL20A1;REV__ENST00000471582.5_1_20:61956720-61961007:+|nuORF;REV__ENST00000479501.5_1_20:61950534-61961007:+|nuORF;REV__nc|ENSG00000101203|Q9P218-2|COL20A1;REV__nc|ENSG00000101203|Q9P218-3|COL20A1 15.847184025352805 0.6768015514314958 4 MPPP 4 -1 57.423 0.0 0.0 6.1059 0.0 0.0 0.0 515.2244094606665 515.2244094606665 42.81865655543953 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 MPPP 6.1059 - 255 + 1 1.825 199248.6 1.0 3124 4428 7546 HBL1_DMSO_200M_050219_2,7554 HBL1_DMSO_200M_050219_2,7554,PMPPRTNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7556 40.874 7.3 6693900.0 25 0 871730.0 + 3824 DAIRTSEI 8 68 452.7404594916384 903.4663660500768 2 452.7407104372978 MULTI CID FTMS 0 0 0 7555 6404791.0 1.0 0 0.0 1 Unmodified _DAIRTSEI_ ENSG00000143612|ENST00000368521|C1orf43;nc|nan|Q9BWL3-2|C1orf43;nc|nan|Q9BWL3-3|C1orf43 24.020572477871973 0.5389365498350341 4 {[DA]|[EG]}{I|L}R[WM]{I|L} 7 3 + 38.217 0.0 0.0 4.23 4.23 82.275 0.0 0.0 0.0 3.511744483784085 18.612650630469005 3.511744483784085 21.989700043360187 0 1.274227503252014 2.0 0.0 0.0 {[DA]|[EG]}{I|L}R[WM]{I|L};{[QN]|[E{I|L}]|[KN]}GR[WM]{I|L};{[QN]|[E{I|L}]|[KN]}[HA]VA[HQ];{[VA]|[{I|L}G]}ER[WM]{I|L} 4.23;1.7961;1.0699;0.49433 -;-;-;- 60 1 1.825 45109.5 1.0 3125 4429 7555 HBL1_DMSO_200M_050219_2,7556 HBL1_DMSO_200M_050219_2,7556,DAIRTSEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7557 40.875 31.0 1424800.0 25 0 315900.0 + 19936 LIDENDNKI 9 65 537.2774954150887 1072.5404378969772 2 537.2775756716728 MULTI CID FTMS 0 0 0 7555 1827659.25 0.7743407529050341 1 -0.0843048095703125 2 Unmodified _LIDENDNKI_ ENSG00000067064|ENST00000381344|IDI1;ENST00000482091.1_1_10:1089912-1094811:-|nuORF;nc|ENSG00000067064|Q13907|IDI1 57.72198328787511 0.0273433238377839 4 {I|L}{I|L}DENDNK{I|L} 9 0 + 92.578 0.0 0.0 8.6317 8.6317 92.851 0.0 0.0 0.0 80.9843534683349 10.590992953673537 10.590992953673537 9.208187539523747 0 0.8494850021680094 2.0 0.805462187404089 0.4247425010840047 + + {I|L}{I|L}DENDNK{I|L};{I|L}{I|L}DENDGGK{I|L};{I|L}{I|L}DEGGDNK{I|L};{I|L}{I|L}DEGGDGGK{I|L} 8.6317;7.7731;7.7731;6.9187 +;-;-;- + 161 + 1 1.825 39759.1 1.0 3126 4429 7555 HBL1_DMSO_200M_050219_2,7557 HBL1_DMSO_200M_050219_2,7557,LIDENDNKI True True LIDENDNKI 40.874793 537.277575671673 31403544.0 7555.0 nc|ENSG00000067064|Q13907|IDI1;;ENSG00000067064|ENST00000381344|IDI1;;ENST00000482091.1_1_10:1089912-1094811:-|nuORF 7.647386868794759 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7558 40.876 42.0 1212700.0 25 0 120650.0 + 44779 YPLSKAQTV 9 68 503.7820742905152 1005.5495956478304 2 503.7821227908134 MULTI CID FTMS 0 0 0 7555 1234508.75 0.1992097102628662 12 -0.3794898986816406 3 Unmodified _YPLSKAQTV_ ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3 30.63653989081413 0.1413794767160703 4 YP{I|L} 3 6 47.435 0.0 0.0 4.7173 0.0 0.0 0.0 629.3270653246258 629.3270653246258 35.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + YP{I|L} 4.7173 + + 69 + 1 1.825 46770.3 1.0 3127 4429 7555 HBL1_DMSO_200M_050219_2,7558 HBL1_DMSO_200M_050219_2,7558,YPLSKAQTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7559 40.878 108.0 725180.0 25 0 143000.0 + -1 SYTMVGLK 8 100 457.7365310700032 913.4585092068064 2 457.7364379763603 MULTI CID FTMS 0 0 0 7555 470788.0 0.8968630068989297 -1 0.0666694641113281 4 Oxidation (M) _SYTM(Oxidation (M))VGLK_ REV__ENSG00000136758|ENST00000376016|YME1L1;REV__nc|ENSG00000136758|Q96TA2-3|YME1L1;REV__nc|ENSG00000136758|Q96TA2|YME1L1 16.942295170755138 0.6606234159769251 4 {[{M(Oxidation (M))|F}C]|[YS]}MATT{I|L}K 8 -1 + 42.349 0.0 0.0 4.6362 4.6362 77.85 0.0 0.0 0.0 6.989700043360188 7.730012720637376 6.989700043360188 7.730012720637376 0 0.3494850021680094 0.0 0.7302046884880937 0.1989700043360188 {[{M(Oxidation (M))|F}C]|[YS]}MATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}MATTK{I|L};[HM]M[PG]T{I|L}K;[HM]M[PG]TK{I|L} 4.6362;3.7899;1.1952;0.34899 -;-;-;- 98 + 1 1.825 67809.3 1.0 3128 4429 7555 HBL1_DMSO_200M_050219_2,7559 HBL1_DMSO_200M_050219_2,7559,SYTMVGLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7560 40.881 161.0 335190.0 25 0 44181.0 42587 VTRDGVVSV 9 75 466.2642083070398 930.5138636808796 2 466.2636596560478 MULTI CID FTMS 0 0 0 7555 331498.875 1.0 0 0.0 5 Unmodified _VTRDGVVSV_ ENST00000556686.1_1_14:52472206-52472602:-|nuORF 27.628801355627647 0.1796483985696185 4 VVSV 4 5 41.186 0.0 0.0 4.4261 0.0 0.0 528.2663471729758 0.0 528.2663471729758 0.0 25.70107520596089 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 + VVSV 4.4261 + + 39 1 1.825 47288.7 1.0 3129 4429 7555 HBL1_DMSO_200M_050219_2,7560 HBL1_DMSO_200M_050219_2,7560,VTRDGVVSV False True TAREAVVSV 40.881414 466.263659656048 2358805.0 7555.0 ENST00000487940.1_1_6:32146222-32147541:+|nuORF;;ENSG00000204308|ENST00000375094|RNF5 0.1370671490828196 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7561 40.883 81.0 626100.0 25 0 50262.0 + 7364 EGAQKEQEI 9 85 516.2536839735342 1030.4928150138685 2 516.2534667849541 MULTI CID FTMS 0 0 0 7555 312027.65625 0.0822230608128597 -9 0.3918266296386719 6 Unmodified _EGAQKEQEI_ REV__ENSG00000205542|ENST00000451311|TMSB4X;REV__ENST00000402089.4_1_4:91760056-91760137:-|nuORF 11.640296217721598 0.521594087909532 4 {[DA]|[EG]}RR{M(Oxidation (M))|F}T{[YC]|[HE]} 8 -1 + 39.587 0.0 0.0 3.8416 3.8416 82.01 0.0 0.0 0.0 7.037533833776401 11.897489324369047 7.037533833776401 38.67188949464263 0 0.0 1.6989700043360187 0.1694451763165201 0.4247425010840047 {[DA]|[EG]}RR{M(Oxidation (M))|F}T{[YC]|[HE]};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[DV][C(Carbamidomethyl (C))K]{I|L} 3.8416;0.088807 -;- 186 1 1.825 43734.0 1.0 3130 4429 7555 HBL1_DMSO_200M_050219_2,7561 HBL1_DMSO_200M_050219_2,7561,EGAQKEQEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7562 40.897 800.0 192860.0 25 0 20331.0 + 16362 IYPGYHQSSY 10 121 607.7774698752676 1213.540386817335 2 607.7776977419853 MULTI CID FTMS 0 0 0 7555 223353.5625 0.5489693815736426 -4 0.1718826293945312 7 Unmodified _IYPGYHQSSY_ ENSG00000176986|ENST00000345254|SEC24C 61.60191391372663 0.0323840705564037 4 {I|L}YPGNSQWSY 10 3 + 118.25 0.0 0.0 9.7446 9.7446 92.951 0.0 0.0 0.0 89.1367654321465 15.026975159433531 15.026975159433531 9.164539485499247 0 0.4247425010840047 2.0 1.4742887089386454 1.316901560044258 {I|L}YPGNSQWSY;{I|L}YPGGGSQWSY;{I|L}YPGNS[AG]WSY;{I|L}YPGNW{[QS]|[NT]}SY;{I|L}Y[HM]SQ[VS]SY;{I|L}YPGNSQ[MT]{[CT]|[{M(Oxidation (M))|F}G]};{I|L}Y[HM]SV{[QS]|[NT]}SY;{I|L}YPGGGS[AG]WSY;{I|L}YPGYH{[QS]|[NT]}SY;{I|L}YPGNSV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[CT]|[{M(Oxidation (M))|F}G]} 9.7446;8.9894;8.5059;7.776;7.3586;7.2288;7.1811;7.152;7.1311;7.0513 -;-;-;-;-;-;-;-;+;- + 3605 + 1 1.825 116699.2 0.8500000238418579 3131 4429 7555 HBL1_DMSO_200M_050219_2,7562 HBL1_DMSO_200M_050219_2,7562,IYPGYHQSSY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7563 40.9 166.0 416230.0 25 0 46937.0 -1 QPPPKCPI 8 90 468.7532287631016 935.4919045930033 2 468.7539855837822 MULTI CID FTMS 0 0 0 7555 178827.078125 0.4151003623889088 -33 1.627899169921875 8 Carbamidomethyl (C) _QPPPKC(Carbamidomethyl (C))PI_ ENSG00000187170|ENST00000368777|LCE4A 12.531546534597751 0.7257836412119636 4 QGV 3 -1 16.287 0.0 0.0 1.741 0.0 0.0 633.3326466357751 0.0 633.3326466357751 0.0 3.1875876262441274 0.0 0.0 0 0.0 0.0 0.0 0.0 QGV 1.741 - 157 + 1 1.825 61247.7 1.0 3132 4429 7555 HBL1_DMSO_200M_050219_2,7563 HBL1_DMSO_200M_050219_2,7563,QPPPKCPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7564 40.907 385.0 268130.0 25 0 26799.0 -1 VKSVQRCMAL 10 109 575.8073602519908 0 575.8072387576103 PEAK CID FTMS 0 0 0 7555 199901.765625 0.71198351794084 -1 0.0666694641113281 9 Oxidation (M) _VKSVQRCM(Oxidation (M))AL_ ENSG00000123136|ENST00000242776|DDX39A;ENST00000587730.5_1_19:14520346-14520718:-|nuORF;ENST00000588692.5_1_19:14519750-14520718:-|nuORF 22.736283301280096 0.276231959287006 4 VA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}V]EV 8 -1 22.95 0.0 0.0 1.9964 0.0 0.0 128.09398052084913 80.05125604801015 208.14523656885927 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3252574989159953 0.0 VA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}V]EV 1.9964 - 122 + 1 1.825 80068.4 1.0 3133 4429 7555 HBL1_DMSO_200M_050219_2,7564 HBL1_DMSO_200M_050219_2,7564,VKSVQRCMAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7565 40.915 420.0 136660.0 25 0 7416.7 + 7199 EEQLQQIRAE 10 87 622.3176201756396 1242.6206874180791 2 622.3186523318291 MULTI CID FTMS 0 0 0 7555 130580.21875 0.1884698702016615 4 -0.2443656921386718 10 Unmodified _EEQLQQIRAE_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 59.05245873256422 0.0390717477387156 4 EEQ{I|L}QQ{I|L}RAE 10 0 + 74.079 0.0 0.0 5.9615 5.9615 84.614 0.0 0.0 0.0 63.99012038334735 11.1988912832049 11.1988912832049 9.164539485499231 0 0.7614393726401688 1.3979400086720375 0.75 0.805462187404089 + + EEQ{I|L}QQ{I|L}RAE;EE[AG]{I|L}QQ{I|L}RAE;EEQ{I|L}[AG]Q{I|L}RAE;EEQ{I|L}Q[AG]{I|L}RAE;EEQ{I|L}[AG][AG]{I|L}RAE;EE[AG]{I|L}[AG]Q{I|L}RAE;EE[AG]{I|L}Q[AG]{I|L}RAE;[VP][YK]QQ{I|L}Q[HC];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HS]QQ{I|L}RAE;[VP][YK][AG]Q{I|L}Q[HC] 5.9615;5.224;5.224;5.224;4.4894;4.4894;4.4894;2.9216;2.2313;2.184 +;-;-;-;-;-;-;-;-;- + 213 + 1 1.825 46278.6 1.0 3134 4429 7555 HBL1_DMSO_200M_050219_2,7565 HBL1_DMSO_200M_050219_2,7565,EEQLQQIRAE True True EEQLQQIRAE 40.914762 622.318652331829 8330931.5 7555.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 6.903400421142578 2.0 True 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 7566 40.929 800.0 229340.0 25 0 15909.0 + 2581 ASKGAAAL 8 210 344.70278749426666 687.3910220553333 2 344.7028076052666 MULTI CID FTMS 0 0 0 7555 132344.21875 1.0 0 0.0 11 Unmodified _ASKGAAAL_ REV__ENSG00000198786|ENST00000361567|MT-ND5 19.256988751693697 0.6264283240490721 4 A{I|L}[RD]T{I|L} 6 -1 + 46.566 0.0 0.0 6.7743 6.7743 86.151 0.0 0.0 0.0 19.997906580286795 6.146387799684874 6.146387799684874 7.291258037473952 0 1.174742501084005 1.6989700043360187 0.3494850021680094 0.0 A{I|L}[RD]T{I|L};[{I|L}A][RD]T{I|L};A{I|L}{[RE]|[WV]}S{I|L};AKSG{[NV]|[RG]}{I|L};A{I|L}{[RE]|[WV]}TV;{[ES]|[DT]|[{I|L}C]}Q[{I|L}V]{I|L};A[YK]{[HG]|PP}{I|L};{[ES]|[DT]|[{I|L}C]}[R{I|L}]A{I|L};AKSG[KT]P;AKSG{[QV]|[N{I|L}]|[RA]|[KV]}V 6.7743;5.7136;5.3006;2.8472;2.6814;1.4279;1.2892;0.98999;0.6726;0.22799 -;-;-;-;-;-;-;-;-;- 134 + 1 1.825 145022.5 0.4900000095367431 3135 4429 7555 HBL1_DMSO_200M_050219_2,7566 HBL1_DMSO_200M_050219_2,7566,ASKGAAAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7567 40.942 800.0 123150.0 25 0 11851.0 + 11533 GIPEKDLHSV 10 131 547.7950396986308 1093.5755264640616 2 547.7960693240166 MULTI CID FTMS 0 0 0 7555 126992.046875 0.4585323788251741 6 -0.2733039855957031 12 Unmodified _GIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 47.594388314883695 0.0942698883389255 4 {[VA]|[{I|L}G]}PEKD{I|L}HSV 10 0 + 71.376 0.0 0.0 6.5268 6.5268 90.5 0.0 0.0 0.0 19.51592841374369 8.234933738005935 8.234933738005935 14.61835432144909 0 0.7302046884880937 2.0 1.34733495922753 0.0 + + {[VA]|[{I|L}G]}PEKD{I|L}HSV;{[VA]|[{I|L}G]}PWW{I|L}HSV;{[VA]|[{I|L}G]}GN{I|L}QHWG{I|L};{[VA]|[{I|L}G]}PSD{I|L}HSVG{I|L};[EP]KD{I|L}HSVG{I|L};{[VA]|[{I|L}G]}GN{I|L}QPEPG{I|L};{[VA]|[{I|L}G]}VYD[TA]SVG{I|L};{[VA]|[{I|L}G]}GGG{I|L}QHWG{I|L};{[VA]|[{I|L}G]}GN{I|L}[AG]HWG{I|L};{[VA]|[{I|L}G]}GNQ{I|L}HWG{I|L} 6.5268;5.1901;4.8164;4.5632;4.5388;4.4309;3.994;3.9783;3.9783;3.9463 +;-;-;-;-;-;-;-;-;- + 2277 + 1 1.825 80294.8 0.6600000262260437 3136 4429 7555 HBL1_DMSO_200M_050219_2,7567 HBL1_DMSO_200M_050219_2,7567,GIPEKDLHSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7568 40.953 558.0 254810.0 25 0 21915.0 45473 YTIQSFRP 8 158 506.2664900810326 1010.5184272288652 2 506.2662536501884 MULTI CID FTMS 0 0 0 7555 120258.375 0.5965936996155278 4 -0.2443656921386718 13 Unmodified _YTIQSFRP_ ENSG00000215029|ENST00000642911|TCP11X2;ENSG00000268235|ENST00000622971|TCP11X1;nc|ENSG00000268235|B4DZS4-2|TCP11X1 30.22481116460888 0.4082965392918993 4 [YT][RN]V 5 5 23.275 0.0 0.0 2.3033 0.0 0.0 0.0 374.1714991946776 374.1714991946776 3.673910434890715 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.0994850021680094 0.2614393726401688 [YT][RN]V 2.3033 - 1551 1 1.825 113969.5 1.0 3137 4429 7555 HBL1_DMSO_200M_050219_2,7568 HBL1_DMSO_200M_050219_2,7568,YTIQSFRP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7570 40.958 29.0 1267100.0 25 0 170880.0 + -1 GEVMSEMNL 9 59 513.2171555276142 1024.4197581220285 2 513.2178832888603 MULTI CID FTMS 0 0 0 7569 1561718.75 0.0592333666495685 9 -0.2635421752929687 1 Oxidation (M) _GEVM(Oxidation (M))SEMNL_ REV__ENSG00000083307|ENST00000646743|GRHL2;REV__nc|ENSG00000083307|Q6ISB3-2|GRHL2 15.847184025352805 0.4077185912009129 4 {[DA]|[EG]}V 3 -1 30.942 0.0 0.0 3.0205 0.0 0.0 0.0 736.2638797863439 736.2638797863439 0.759752854957938 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V 3.0205 + + 25 1 1.825 38980.2 1.0 3138 4430 7569 HBL1_DMSO_200M_050219_2,7570 HBL1_DMSO_200M_050219_2,7570,GEVMSEMNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7571 40.96 114.0 469350.0 25 0 48962.0 + 31436 RPPPPNSVI 9 98 488.782987973846 975.551423014492 2 488.7828857302666 MULTI CID FTMS 0 0 0 7569 322641.9375 0.5932553783212283 8 -0.2336006164550781 2 Unmodified _RPPPPNSVI_ ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1 24.020572477871973 0.2255576514309169 4 SV{I|L} 3 6 33.698 0.0 0.0 3.4542 0.0 0.0 658.3564302802977 0.0 658.3564302802977 0.0 17.367282444438548 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 + SV{I|L} 3.4542 + + 240 1 1.825 48552.7 1.0 3139 4430 7569 HBL1_DMSO_200M_050219_2,7571 HBL1_DMSO_200M_050219_2,7571,RPPPPNSVI False True RPPPPNSVI 40.960297 488.782885730267 36313660.0 7569.0 ENST00000453595.1_1_X:36980271-36981156:-|nuORF;;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;;nc|ENSG00000198176|Q14186-2|TFDP1;;ENSG00000198176|ENST00000375370|TFDP1 6.66865889231364 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7572 40.961 35.0 995650.0 25 0 126850.0 36528 TAGSFRCECP 10 78 535.7232481784182 1069.4319434236363 2 535.7236205935478 MULTI CID FTMS 0 0 0 7569 1359789.75 0.9946258129214556 -1 0.0843048095703125 3 Unmodified _TAGSFRCECP_ ENSG00000142449|ENST00000600128|FBN3 4.897010918128616 0.7039849508293987 4 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}Y 4 9 13.984 0.0 0.0 1.3077 0.0 0.0 0.0 506.1043426758426 506.1043426758426 3.4999344677648736 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}Y 1.3077 - 27 1 1.825 34010.3 1.0 3140 4430 7569 HBL1_DMSO_200M_050219_2,7572 HBL1_DMSO_200M_050219_2,7572,TAGSFRCECP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7573 40.963 62.0 1358200.0 25 0 395160.0 + 37084 TGLTSASLL 9 80 431.74754674162665 861.4805405500533 2 431.7475463747978 MULTI CID FTMS 0 0 0 7569 838343.9375 0.9722236275475792 -1 0.0843048095703125 4 Unmodified _TGLTSASLL_ REV__ENST00000383729.8_2_3:49027379-49027721:+|nuORF 34.10243960390752 0.1078313939113124 4 {[SA]|[TG]}{I|L} 3 -1 28.244 0.0 0.0 3.2786 0.0 0.0 0.0 587.3066500299436 587.3066500299436 3.7802217037673103 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {[SA]|[TG]}{I|L} 3.2786 + + 37 + 1 1.825 69232.4 1.0 3141 4430 7569 HBL1_DMSO_200M_050219_2,7573 HBL1_DMSO_200M_050219_2,7573,TGLTSASLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7574 40.965 73.0 810590.0 25 0 57716.0 + 15466 IPRNQLQSV 9 85 527.803352500111 1053.592152067022 2 527.8044921755791 MULTI CID FTMS 0 0 0 7569 449598.3125 0.2224724696398596 -6 0.2895278930664062 5 Unmodified _IPRNQLQSV_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4 22.736283301280096 0.2418982879461534 4 H{I|L}QW 4 7 31.899 0.0 0.0 3.0276 0.0 0.0 471.2823353498063 0.0 471.2823353498063 0.0 3.711375162600703 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 H{I|L}QW 3.0276 - 203 1 1.825 50609.0 1.0 3142 4430 7569 HBL1_DMSO_200M_050219_2,7574 HBL1_DMSO_200M_050219_2,7574,IPRNQLQSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7575 40.967 116.0 456310.0 25 0 45235.0 + 2230 AQDEPAESL 9 101 480.2194861603424 958.4244193874848 2 480.2198364138603 MULTI CID FTMS 0 0 0 7569 416433.625 0.5449270483677757 -13 0.6868858337402344 6 Unmodified _AQDEPAESL_ ENSG00000141582|ENST00000269397|CBX4;nc|ENSG00000141582|O00257-3|CBX4 49.93300154707207 0.0405168250806675 4 {[TV]|[{I|L}S]}E 3 8 22.28 0.0 0.0 2.3247 0.0 0.0 0.0 626.241838170941 626.241838170941 0.0257498915995313 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.0 {[TV]|[{I|L}S]}E 2.3247 - 152 1 1.825 49402.9 1.0 3143 4430 7569 HBL1_DMSO_200M_050219_2,7575 HBL1_DMSO_200M_050219_2,7575,AQDEPAESL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7576 40.97 120.0 469170.0 25 0 40240.0 + + 21381 LPSASTSKATI 11 102 538.303693255891 1074.5928335785818 2 538.3038818240166 MULTI CID FTMS 0 0 0 7569 378786.71875 1.0 0 0.0 7 Unmodified _LPFSTSLPLT_ ENST00000466696.1_1_3:87302513-87302969:+|nuORF;nc|ENSG00000083937|Q9UQN3-2|CHMP2B;ENSG00000083937|ENST00000263780|CHMP2B 30.63653989081413 0.2803493085145199 4 {I|L}PSASN 6 -1 68.206 0.0 0.0 6.3472 0.0 0.0 0.0 502.2930086725219 502.2930086725219 44.60239002314389 0.0 0.0 0.0 0 0.6307196863200843 2.0 0.4247425010840047 0.0 {I|L}PSASN 6.3472 - 687 + 1 1.825 54386.9 1.0 3144 4430 7569 HBL1_DMSO_200M_050219_2,7576 HBL1_DMSO_200M_050219_2,7576,LPFSTSLPLT False False LPSASTSKATI 40.969624 538.303881824017 3170178.25 7569.0 ENST00000466696.1_1_3:87302513-87302969:+|nuORF;;nc|ENSG00000083937|Q9UQN3-2|CHMP2B;;ENSG00000083937|ENST00000263780|CHMP2B 4.6344161828358965 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7577 40.974 236.0 333450.0 25 0 48024.0 + 21877 LPPESTQV 8 100 435.7319671401997 869.4493813471995 2 435.7322875857353 MULTI CID FTMS 0 0 0 7569 211152.46875 0.649984459542721 -26 1.2233848571777344 8 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 26.34127834903884 0.4900704351052977 4 T{I|L}{M(Oxidation (M))|F}QV 5 6 20.934 0.0 0.0 2.4078 0.0 0.0 263.14519541145575 0.0 263.14519541145575 0.0 7.633738724173686 0.0 0.0 0 0.0 0.0 0.5 0.3494850021680094 T{I|L}{M(Oxidation (M))|F}QV 2.4078 - 167 + 1 1.825 65925.0 1.0 3145 4430 7569 HBL1_DMSO_200M_050219_2,7577 HBL1_DMSO_200M_050219_2,7577,LPPESTQV False False LPPESTQV 40.974041 435.732287585735 12131212.0 7569.0 ENSG00000095059|ENST00000210060|DHPS;;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;;nc|ENSG00000095059|P49366-2|DHPS 4.341552813847859 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7578 40.978 192.0 302130.0 25 0 25880.0 + 35967 SVQESTVTV 9 92 475.2454305260575 948.476308118915 2 475.2457458376884 MULTI CID FTMS 0 0 0 7569 201704.671875 1.0 0 0.0 9 Unmodified _SVQESTVTV_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON 22.736283301280096 0.2418982879461534 4 [VS]QC(Carbamidomethyl (C))[KQ]TV 8 4 + 42.171 0.0 0.0 4.4462 4.4462 80.659 0.0 0.0 0.0 18.98325926497116 12.838797225625616 12.838797225625616 10.229239748666927 0 0.718765315847925 1.6989700043360187 0.6109243748081782 0.0 [VS]QC(Carbamidomethyl (C))[KQ]TV;[VS][C(Carbamidomethyl (C))K]QQTV;[VS][YR]YYV;[VS][YR]EQ[PA];[VS][C(Carbamidomethyl (C))K]PYPV;{[TV]|[{I|L}S]}NE[YR][PA];[VS][YR][DN]PV;[VS][C(Carbamidomethyl (C))K][RN]SV;[VS][YR]E[AG][PA];{[TV]|[{I|L}S]}GGE[YR][PA] 4.4462;3.3677;2.5796;2.493;2.3598;2.3427;2.2011;1.9939;1.5164;1.3662 -;-;-;-;-;-;-;-;-;- 219 + 1 1.825 51013.1 1.0 3146 4430 7569 HBL1_DMSO_200M_050219_2,7578 HBL1_DMSO_200M_050219_2,7578,SVQESTVTV False True SVQESTVTV 40.97772 475.245745837688 1359560.75 7569.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-9|SON 3.153337081273397 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7579 40.992 800.0 203280.0 25 0 15743.0 + 13571 HPITHLLISL 10 141 381.9019863301553 1142.684129590666 3 381.9021179080009 MULTI CID FTMS 0 0 0 7569 161691.71875 0.364446155260295 5 -0.1889991760253906 10 Unmodified _HPITHLLISL_ REV__ENST00000488213.5_1_3:184082670-184082769:+|nuORF 8.97624648632007 0.6851160995914376 4 {M(Oxidation (M))|F}PEK{I|L}K[R{I|L}]{I|L} 9 -1 + 30.723 0.0 0.0 2.6886 2.6886 78.845 0.0 0.0 0.0 10.277289224562129 1.522044440423901 1.522044440423901 30.722601818286112 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}PEK{I|L}K[R{I|L}]{I|L} 2.6886 - 92 + 1 1.825 131045.1 0.5899999737739563 3147 4430 7569 HBL1_DMSO_200M_050219_2,7579 HBL1_DMSO_200M_050219_2,7579,HPITHLLISL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7580 41.005 800.0 115590.0 25 0 11245.0 + -1 EYRWECMKRYP 11 80 809.3683053870037 1616.722057840807 2 809.8713256716728 MULTI CID FTMS 0 0 0 7569 156033.734375 1.0 0 0.0 11 Carbamidomethyl (C) _EYRWEC(Carbamidomethyl (C))MKRYP_ REV__ENSG00000165899|ENST00000547103|OTOGL 0.3070304955306653 0.8736993455979228 4 {M(Oxidation (M))|F}ANQQA[C(Carbamidomethyl (C))R]WQ 10 -1 65.795 0.0 0.0 4.0696 0.0 0.0 309.1380580783189 0.0 309.1380580783189 0.0 58.80510344348764 0.0 0.0 0 0.8494850021680094 0.0 0.0 1.1549471895720984 {M(Oxidation (M))|F}ANQQA[C(Carbamidomethyl (C))R]WQ 4.0696 - 2576 + 1 1.825 70296.7 0.6000000238418579 3148 4430 7569 HBL1_DMSO_200M_050219_2,7580 HBL1_DMSO_200M_050219_2,7580,EYRWECMKRYP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7581 41.015 528.0 148810.0 25 0 9750.1 + -1 AQITECMCI 9 116 542.7259268995903 1083.4373008659804 2 542.7262451052666 MULTI CID FTMS 0 0 0 7569 107932.8515625 0.7660961991208368 -4 0.2171249389648437 12 Carbamidomethyl (C),Oxidation (M) _AQITEC(Carbamidomethyl (C))M(Oxidation (M))CI_ REV__ENST00000209728.8_1_17:38447541-38449724:+|nuORF 10.823927491677226 0.5436922275383211 4 [QA]P 3 -1 23.153 0.0 0.0 2.137 0.0 0.0 0.0 784.2639189929517 784.2639189929517 9.658235670143911 0.0 0.0 0.0 0 0.5 0.7695510786217261 0.0 0.0 [QA]P 2.137 - 164 + 1 1.825 66674.2 1.0 3149 4430 7569 HBL1_DMSO_200M_050219_2,7581 HBL1_DMSO_200M_050219_2,7581,AQITECMCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7582 41.029 800.0 320720.0 25 0 32564.0 + -1 DAYDASCMK 9 191 530.7069072038664 1059.3992614745328 2 530.7079345583916 MULTI CID FTMS 0 0 0 7569 106985.453125 0.0318144699914185 -11 0.5215835571289062 13 Carbamidomethyl (C) _DAYDASC(Carbamidomethyl (C))MK_ REV__ENSG00000042832|ENST00000220616|TG;REV__nc|ENSG00000042832|P01266-2|TG 18.1463463914782 0.3454829746528889 4 {[DA]|[EG]}YDEY 6 -1 39.813 0.0 0.0 3.758 0.0 0.0 0.0 300.1179134306301 300.1179134306301 20.56009668965985 0.0 0.0 0.0 0 0.5891368308784531 1.6989700043360187 0.760001290417896 0.0 {[DA]|[EG]}YDEY 3.758 - 901 1 1.825 202026.3 0.6000000238418579 3150 4430 7569 HBL1_DMSO_200M_050219_2,7582 HBL1_DMSO_200M_050219_2,7582,DAYDASCMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7584 41.033 6.1 8638300.0 25 0 941060.0 + 24978 MPPPPPQGV 9 69 460.23852327962805 918.462493626056 2 460.2389099001884 MULTI CID FTMS 0 0 0 7583 9485476.0 0.5118418117459885 -27 1.2986564636230469 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 74.39630413441286 0.0193995060682538 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQGV 9 0 + 48.299 0.0 0.0 5.2586 5.2586 69.113 0.0 0.0 0.0 22.89258754269092 3.288493772929044 3.288493772929044 0.189549981487076 0 2.1989700043360187 0.0 0.0 0.4247425010840047 + + {NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;{NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{[HG]|PP}NNPPQR;[VG][EP]HPQR;{[HG]|PP}GGNPPQR;{[HG]|PP}NGGPPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQGV;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR;{[HG]|PP}GGGGPPQR 5.2586;5.238;3.9034;3.4332;2.895;2.895;2.598;2.0313;1.9494;1.8924 +;-;-;-;-;-;-;-;-;- + 214 + 1 1.83 48635.3 1.0 3151 4431 7583 HBL1_DMSO_200M_050219_2,7584 HBL1_DMSO_200M_050219_2,7584,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7585 41.034 29.0 1541800.0 25 0 212530.0 + 1675 ALPDQGIAKA 10 65 492.2802795309003 982.5460061286008 2 492.2799255251884 MULTI CID FTMS 0 0 0 7583 1424298.25 0.1427359507936672 3 -0.1048545837402343 2 Unmodified _ALPDQGIAKA_ ENSG00000089289|ENST00000356413|IGBP1 29.84058131909904 0.2982332456971691 4 [{I|L}A]PDQG{I|L}A[KA] 10 0 + 52.625 0.0 0.0 5.3559 5.3559 82.21 0.0 0.0 0.0 5.969100130080562 4.259687322722812 4.259687322722812 9.164539485499256 0 0.8182503180159344 2.0 0.0 0.3807196863200844 + + [{I|L}A]PDQG{I|L}A[KA];[{I|L}A]PD[AG]G{I|L}A[KA];[{I|L}A]PDQ[Q{I|L}][KA];[{I|L}A]PD[AG][Q{I|L}][KA] 5.3559;4.4232;4.2906;3.3534 +;-;-;- + 74 + 1 1.83 41181.0 1.0 3152 4431 7583 HBL1_DMSO_200M_050219_2,7585 HBL1_DMSO_200M_050219_2,7585,ALPDQGIAKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7586 41.036 21.0 3510300.0 25 0 337970.0 + + 16762 RPRGPEGVGSL 11 75 375.5438403944079 1123.6096917834236 3 375.5436889529228 MULTI CID FTMS 0 0 0 7583 2665904.0 0.9161914926357082 -2 0.159576416015625 3 Unmodified _KFSGRSSRSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 23.015651743759182 0.4515786786615758 4 SGVG[KC]SRS{I|L} 10 -1 46.948 0.0 0.0 4.1784 0.0 0.0 131.09372004120706 0.0 131.09372004120706 0.0 35.97926902225012 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.7302046884880937 SGVG[KC]SRS{I|L} 4.1784 - 237 + 1 1.83 66392.5 1.0 3153 4431 7583 HBL1_DMSO_200M_050219_2,7586 HBL1_DMSO_200M_050219_2,7586,KFSGRSSRSL False False RPRGPEGVGSL 41.035546 375.543688952923 94964924.0 7583.0 ENST00000523767.5_1_5:149877380-149900454:+|nuORF 8.108025868733725 3.0 False 11.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7587 41.037 34.0 2109000.0 25 0 249260.0 + 5686 DPHSFPRTV 9 105 352.5139443299147 1054.520003589944 3 352.5136901736259 MULTI CID FTMS 0 0 0 7583 1532701.875 0.6440629472325592 -8 0.3896446228027344 4 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 11.494710602746466 0.5255349189887087 4 [WY]S{M(Oxidation (M))|F}P 5 6 24.449 0.0 0.0 2.3185 0.0 0.0 0.0 371.20522328306936 371.20522328306936 4.941639098424734 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 0.0 0.0 [WY]S{M(Oxidation (M))|F}P 2.3185 - 106 + 1 1.83 62768.1 1.0 3154 4431 7583 HBL1_DMSO_200M_050219_2,7587 HBL1_DMSO_200M_050219_2,7587,DPHSFPRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7588 41.038 52.0 1250800.0 25 0 171210.0 + 26749 PAAPLRPVSG 10 67 482.78254305279614 963.5505331723924 2 482.7825500369072 MULTI CID FTMS 0 0 0 7583 1220753.25 0.9408224631506564 -4 0.2774085998535156 5 Unmodified _PAAPLRPVSG_ REV__chr22:37692026-37693332|27|11.0|0.0|20.07|+|1|None,NOL12|1 17.11289562659939 0.5604042439455784 4 [PA]APV 5 -1 55.956 0.0 0.0 5.8072 0.0 0.0 0.0 525.2792303954714 525.2792303954714 31.51863755803668 0.0 0.0 0.0 0 1.674742501084005 1.6989700043360187 0.0 0.0 [PA]APV 5.8072 - 50 + 1 1.83 53861.7 1.0 3155 4431 7583 HBL1_DMSO_200M_050219_2,7588 HBL1_DMSO_200M_050219_2,7588,PAAPLRPVSG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7589 41.039 53.0 1119000.0 25 0 110480.0 + 6140 DSYRKQVVI 9 85 554.3113820102004 1106.6082110872007 2 554.3117553591728 MULTI CID FTMS 0 0 0 7583 1138157.875 0.7222414840828683 1 -0.0494651794433593 6 Unmodified _DSYRKQVVI_ ENSG00000133703|ENST00000311936|KRAS;ENSG00000174775|ENST00000311189|HRAS;ENSG00000213281|ENST00000369535|NRAS;nc|ENSG00000133703|P01116|KRAS;nc|ENSG00000174775|P01112-2|HRAS 21.53697664764585 0.2571576504437394 4 QVV{I|L} 4 5 36.428 0.0 0.0 3.2919 0.0 0.0 649.3182586298236 0.0 649.3182586298236 0.0 27.844406447039063 0.0 0.0 0 0.75 0.0 0.0 0.0 + QVV{I|L} 3.2919 + + 142 1 1.83 52519.6 1.0 3156 4431 7583 HBL1_DMSO_200M_050219_2,7589 HBL1_DMSO_200M_050219_2,7589,DSYRKQVVI False True DSYRKQVVI 41.039457 554.311755359173 25141764.0 7583.0 nc|ENSG00000174775|P01112-2|HRAS;;ENSG00000213281|ENST00000369535|NRAS;;ENSG00000133703|ENST00000311936|KRAS;;ENSG00000174775|ENST00000311189|HRAS;;nc|ENSG00000133703|P01116|KRAS 3.234686056772868 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7590 41.041 90.0 600660.0 25 0 41110.0 -1 0 84 521.9928466066749 3646.898990980524 7 522.2799560427666 MULTI CID FTMS 0 0 0 7583 398050.375 0.254711486162214 2 -0.0847892761230468 7 4 [YK]{I|L}[HQ]VV 7 -1 11.298 0.0 0.0 0.30979 0.0 0.0 0.0 2776.3957643009226 2776.3957643009226 -6.850461017086076 0.0 -6.850461017086076 0.0 0 0.0 0.0 0.0 0.7742275032520141 [YK]{I|L}[HQ]VV 0.30979 - 165 1 1.83 49225.1 1.0 3157 4431 7583 HBL1_DMSO_200M_050219_2,7590 HBL1_DMSO_200M_050219_2,7590, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7591 41.044 128.0 626880.0 25 0 40755.0 + 36502 TAELGIRHV 9 111 332.5260803025516 994.5564115078548 3 332.5258056521416 MULTI CID FTMS 0 0 0 7583 370823.5 0.5232536255823482 -2 0.159576416015625 8 Unmodified _TAELGIRHV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 38.61474834105838 0.0830609365873449 4 TAE{I|L}G{I|L}RHV 9 0 + 81.31 0.0 0.0 8.1755 8.1755 97.54 0.0 0.0 0.0 69.52745127200336 8.601292910313347 8.601292910313347 59.937463172752175 0 0.6747425010840047 2.0 0.5 0.0 + + TAE{I|L}G{I|L}RHV;[PG][KQ]{I|L}G{I|L}[WP];[PG][KQ]{I|L}[W{I|L}][PG] 8.1755;2.149;0.69071 +;-;- + 156 + 1 1.83 67873.3 1.0 3158 4431 7583 HBL1_DMSO_200M_050219_2,7591 HBL1_DMSO_200M_050219_2,7591,TAELGIRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7592 41.05 338.0 300850.0 25 0 35547.0 + 29217 QGLEMPGYDC 10 117 556.7239557242488 1111.4333585152974 2 556.7243530154228 MULTI CID FTMS 0 0 0 7583 346867.0625 0.5464179905791444 1 -0.0494651794433593 9 Unmodified _QGLEMPGYDC_ REV__ENST00000475441.5_1_1:28905145-28906492:-|nuORF;REV__nc|ENSG00000197989|Q9BXW3|SNHG12 27.628801355627647 0.3479284626772844 4 {[QG]|[NA]}{I|L}ET{M(Oxidation (M))|F}P[CS]M 10 -1 + 60.06 0.0 0.0 5.4038 5.4038 87.682 0.0 0.0 0.0 35.147678599754 2.9900868069886144 2.9900868069886144 30.5879067473932 0 0.75 2.0 1.174742501084005 0.0 {[QG]|[NA]}{I|L}ET{M(Oxidation (M))|F}P[CS]M;{[QG]|[NA]}[WM][C(Carbamidomethyl (C))S]{I|L}{[QC]|[C(Carbamidomethyl (C))A]};GGA[WM][C(Carbamidomethyl (C))S]{I|L}{[QC]|[C(Carbamidomethyl (C))A]};[YV][HC][C(Carbamidomethyl (C))S]{I|L}{[QC]|[C(Carbamidomethyl (C))A]} 5.4038;2.6517;1.32;0.73691 -;-;-;- 258 + 1 1.83 84963.7 1.0 3159 4431 7583 HBL1_DMSO_200M_050219_2,7592 HBL1_DMSO_200M_050219_2,7592,QGLEMPGYDC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7593 41.057 366.0 343450.0 25 0 48505.0 + 18473 KYISGPHEL 9 147 348.522414907416 1042.545415322448 3 348.5219299197197 MULTI CID FTMS 0 0 0 7583 128764.7734375 0.2981485615258824 3 -0.1048545837402343 10 Unmodified _KYISGPHEL_ ENSG00000117724|ENST00000366955|CENPF 10.073929032068715 0.563993802247229 4 SG{M(Oxidation (M))|F} 3 7 18.06 0.0 0.0 1.7323 0.0 0.0 404.2442811445167 344.15143762760005 748.3957187721168 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 SG{M(Oxidation (M))|F} 1.7323 - 52 + 1 1.83 103792.8 1.0 3160 4431 7583 HBL1_DMSO_200M_050219_2,7593 HBL1_DMSO_200M_050219_2,7593,KYISGPHEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7594 41.071 800.0 196470.0 25 0 41359.0 4889 DGHLLHTFY 9 115 551.7673240790308 1101.5200952248615 2 551.7681762576103 MULTI CID FTMS 0 0 0 7583 119622.0078125 0.5677001599106606 2 -0.0847892761230468 11 Unmodified _DGHLLHTFY_ ENSG00000149256|ENST00000278550|TENM4 32.30548876998284 0.1201446275138228 4 [DG]H{I|L}YD{I|L}[RN] 9 5 + 49.657 0.0 0.0 4.5081 4.5081 77.165 0.0 0.0 0.0 19.663253565256355 4.379617791072832 4.379617791072832 7.431278489376034 0 1.579689690656103 0.0 0.0 0.6747425010840047 [DG]H{I|L}YD{I|L}[RN];{I|L}GDHYD{I|L}[RN];[DG]H{I|L}YD[RN]{I|L};[DG]{I|L}HYD{I|L}[RN];[DG]H{I|L}K{[QN]|[E{I|L}]|[KN]}QY;[DV]AHYD{I|L}[RN];{I|L}GDHYD[RN]{I|L};{I|L}GDHK{[QN]|[E{I|L}]|[KN]}QY;[DG]{I|L}HYD[RN]{I|L};[DG]{I|L}HK{[QN]|[E{I|L}]|[KN]}QY 4.5081;3.8334;3.8016;3.7809;3.7796;3.1463;3.127;3.105;3.0744;3.0524 -;-;-;-;-;-;-;-;-;- 1003 + 1 1.83 121917.9 0.6299999952316284 3161 4431 7583 HBL1_DMSO_200M_050219_2,7594 HBL1_DMSO_200M_050219_2,7594,DGHLLHTFY True False NGHIYDNRI 41.070605 551.76817625761 0.0 7583.0 nc|ENSG00000147162|O15294-3|OGT;;ENSG00000147162|ENST00000373719|OGT;;nc|ENSG00000147162|O15294-4|OGT;;nc|ENSG00000147162|O15294-2|OGT 2.538480559984843 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7595 41.078 420.0 317040.0 25 0 14803.0 + 11530 GIPEKDLHSV 10 150 365.53319332565394 1093.577750577162 3 365.5326110720634 MULTI CID FTMS 0 0 0 7583 115288.625 0.2264783597164665 10 -0.2199134826660156 12 Unmodified _GIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 11.494710602746466 0.654671931888957 4 {[VA]|[{I|L}G]}PE 4 6 40.56 0.0 0.0 3.7089 0.0 0.0 0.0 694.3547457330686 694.3547457330686 22.39909385331508 0.0 0.0 0.0 0 0.25 2.0 0.4247425010840047 0.0 + {[VA]|[{I|L}G]}PE 3.7089 + + 252 + 1 1.83 112825.3 1.0 3162 4431 7583 HBL1_DMSO_200M_050219_2,7595 HBL1_DMSO_200M_050219_2,7595,GIPEKDLHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7597 41.084 155.0 365300.0 25 0 19416.0 + 6726 EDKRQDMANAF 11 69 662.799511531029 1323.584470128858 2 662.7997924685478 MULTI CID FTMS 0 0 0 7596 462741.40625 0.9206295984928452 2 -0.055389404296875 1 Unmodified _EDKRQDMANAF_ ENSG00000062598|ENST00000290246|ELMO2;ENST00000480042.5_1_20:45008831-45014791:-|nuORF;nc|ENSG00000062598|Q96JJ3-3|ELMO2 20.41453444215458 0.6105011870913812 4 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F} 13 9 + 118.6 0.0 0.0 8.9602 8.9602 92.119 0.0 0.0 0.0 17.611179110848624 16.642078980768062 16.642078980768062 9.072459467631006 0 0.7614393726401688 1.6989700043360187 0.0 2.079689690656103 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG][AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQ[AG]GGA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F} 8.9602;8.2747;8.2747;8.2747;8.1375;7.6296;7.591;7.591;7.591;7.4501 -;-;-;-;-;-;-;-;-;- 1199 1 1.83 44924.9 1.0 3163 4432 7596 HBL1_DMSO_200M_050219_2,7597 HBL1_DMSO_200M_050219_2,7597,EDKRQDMANAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7598 41.097 800.0 135660.0 25 0 38517.0 + 32108 RVLSEDAIRTA 11 89 615.8441658262095 1229.673778719219 2 615.8437988162041 MULTI CID FTMS 0 0 0 7596 94411.7421875 0.8727571809965218 1 -0.0353240966796875 2 Unmodified _RVLSEDAIRTA_ ENSG00000168393|ENST00000305784|DTYMK;nc|ENSG00000168393|P23919-2|DTYMK 21.799462835604743 0.5803446114589816 4 R{I|L}A 3 8 28.94 0.0 0.0 2.3535 0.0 0.0 190.09487774888072 696.3320336380895 886.4269113869702 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.4247425010840047 R{I|L}A 2.3535 - 25 + 1 1.83 85708.4 0.5600000023841858 3164 4432 7596 HBL1_DMSO_200M_050219_2,7598 HBL1_DMSO_200M_050219_2,7598,RVLSEDAIRTA False True RVLSEDAIRTA 41.097338 615.843798816204 715842.125 7596.0 ENSG00000168393|ENST00000305784|DTYMK;;nc|ENSG00000168393|P23919-2|DTYMK 3.2774044275283813 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7599 41.099 42.0 1332700.0 25 0 90003.0 + 36504 TAELGIRHV 9 85 498.2853408464354 994.5561287596709 2 498.2851745486259 MULTI CID FTMS 0 0 0 7596 968362.4375 0.7470943035803611 -4 0.2757110595703125 3 Unmodified _TAELGIRHV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 47.594388314883695 0.0456443387682827 4 [TA]E{I|L}G{I|L}R[HV] 9 0 + 63.121 0.0 0.0 6.3467 6.3467 92.458 0.0 0.0 0.0 60.647124887093824 3.65279269351241 3.65279269351241 63.12137499549429 0 1.0 1.6989700043360187 0.4247425010840047 0.0 + + [TA]E{I|L}G{I|L}R[HV] 6.3467 + + 49 + 1 1.83 47002.2 1.0 3165 4432 7596 HBL1_DMSO_200M_050219_2,7599 HBL1_DMSO_200M_050219_2,7599,TAELGIRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7600 41.1 80.0 988410.0 25 0 100850.0 6018 DSAPGMAPPPP 11 94 518.7431468910955 1035.471740848991 2 518.7438232302666 MULTI CID FTMS 0 0 0 7596 603366.6875 0.175092789211785 -13 0.6463203430175781 4 Unmodified _DSAPGMAPPPP_ ENST00000369550.9_1_X:153991041-153991164:+|nuORF 13.90604991867851 0.7458848613461305 4 {[DS]|[MA]|[CV]|TT}AP 4 7 24.693 0.0 0.0 2.3847 0.0 0.0 0.0 662.3030278460335 662.3030278460335 6.365006360318688 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + {[DS]|[MA]|[CV]|TT}AP 2.3847 + + 82 + 1 1.83 65306.8 1.0 3166 4432 7596 HBL1_DMSO_200M_050219_2,7600 HBL1_DMSO_200M_050219_2,7600,DSAPGMAPPPP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7601 41.103 138.0 728580.0 25 0 57326.0 + -1 EGSVCVCLAV 10 109 346.1649495094744 1035.4730191286233 3 346.1647827029228 MULTI CID FTMS 0 0 0 7596 482467.59375 0.190570244713567 -13 0.6463203430175781 5 Carbamidomethyl (C) _EGSVC(Carbamidomethyl (C))VCLAV_ REV__ENST00000423656.5_1_3:51533973-51534006:-|nuORF 9.5439744041441 0.6824900257974675 4 VVKV 4 -1 21.509 0.0 0.0 2.0772 0.0 0.0 592.1619512030194 0.0 592.1619512030194 0.0 2.301796106316008 0.0 0.0 0 0.0 0.0 0.0 0.2215141619232908 VVKV 2.0772 - 111 + 1 1.83 88495.5 1.0 3167 4432 7596 HBL1_DMSO_200M_050219_2,7601 HBL1_DMSO_200M_050219_2,7601,EGSVCVCLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7602 41.108 269.0 260200.0 25 0 19289.0 + 40063 VGGRQGAETL 10 115 494.2641371301421 986.5137213270842 2 494.2631713747978 MULTI CID FTMS 0 0 0 7596 282742.6875 0.9583810567822626 -3 0.2090415954589843 6 Unmodified _VGGRQGAETL_ REV__ENST00000492211.5_1_10:98982170-98982335:-|nuORF 39.94969957227396 0.1580982266129622 4 {[NV]|[RG]}RNVGDT{I|L} 9 -1 + 65.869 0.0 0.0 6.6769 6.6769 84.906 0.0 0.0 0.0 2.3764301679958777 48.37758990359475 2.3764301679958777 6.478174818886373 0 1.305462187404089 0.0 0.4247425010840047 0.3494850021680094 {[NV]|[RG]}RNVGDT{I|L};{[NV]|[RG]}RNRDT{I|L};[{I|L}T]D[RP]GDT{I|L};{[NV]|[RG]}RGGVGDT{I|L};{[QN]|[E{I|L}]|[KN]}S[RP]GDT{I|L};[{I|L}T]DG[RP]DT{I|L};{[NV]|[RG]}RGGRDT{I|L};{[QN]|[E{I|L}]|[KN]}SG[RP]DT{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}[RP]GDT{I|L};{[QN]|[E{I|L}]|[KN]}AAVVGDT{I|L} 6.6769;6.0202;5.9859;5.7435;5.6289;5.1971;5.0814;4.8401;4.5009;4.4491 -;-;-;-;-;-;-;-;-;- 717 1 1.83 57041.4 1.0 3168 4432 7596 HBL1_DMSO_200M_050219_2,7602 HBL1_DMSO_200M_050219_2,7602,VGGRQGAETL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7603 41.111 122.0 485360.0 25 0 49278.0 -1 MPPPPPQGV 9 93 468.2364995746263 0 468.2362243533134 PEAK CID FTMS 0 0 0 7596 256674.09375 0.3212598282910689 -27 1.3303756713867188 7 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 26.34127834903884 0.1435854383732919 4 PP 2 -1 6.9553 0.0 0.0 0.74431 0.0 0.0 399.2116943623401 338.11896692447505 737.3306612868151 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 PP 0.74431 + + 60 + 1 1.83 51703.7 1.0 3169 4432 7596 HBL1_DMSO_200M_050219_2,7603 HBL1_DMSO_200M_050219_2,7603,MPPPPPQGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7604 41.113 142.0 352470.0 25 0 22211.0 -1 DQYCEKSA 8 93 500.7058432705106 999.3971336078212 2 500.7057372927666 MULTI CID FTMS 0 0 0 7596 231018.328125 0.6287648048245025 -2 0.1247367858886718 8 Carbamidomethyl (C) _DQYC(Carbamidomethyl (C))EKSA_ ENSG00000157259|ENST00000287957|GATAD1 9.347437153973935 0.7675937258251505 4 {[QS]|[NT]}M 3 -1 13.345 0.0 0.0 1.3353 0.0 0.0 0.0 650.24250649284 650.24250649284 1.126342309407546 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 {[QS]|[NT]}M 1.3353 - 35 1 1.83 44523.1 1.0 3170 4432 7596 HBL1_DMSO_200M_050219_2,7604 HBL1_DMSO_200M_050219_2,7604,DQYCEKSA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7606 41.118 14.0 3667200.0 25 0 325990.0 + 22065 LPPPPQQKI 9 53 509.3084386644216 1016.6023243956432 2 509.3084899783134 MULTI CID FTMS 0 0 0 7605 4157354.25 0.963896101457128 -1 0.0353240966796875 1 Unmodified _LPPPPQQKI_ ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 26.88365393820708 0.1891292719743517 4 {I|L}PPP 4 5 59.24 0.0 0.0 5.8273 0.0 0.0 0.0 609.3370344187263 609.3370344187263 37.51393987558032 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + {I|L}PPP 5.8273 + + 143 + 1 1.83 50517.6 1.0 3171 4433 7605 HBL1_DMSO_200M_050219_2,7606 HBL1_DMSO_200M_050219_2,7606,LPPPPQQKI False True LPPPPQQKI 41.117979 509.308489978313 135033336.0 7605.0 nc|ENSG00000101343|Q9BZJ0|CRNKL1;;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;;ENSG00000101343|ENST00000536226|CRNKL1 5.62089729309082 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7607 41.119 56.0 1413000.0 25 0 474750.0 + 31459 RPRGPEGVGSL 11 49 562.8120828691694 1123.6096128051388 2 562.8122436404228 MULTI CID FTMS 0 0 0 7605 1222354.75 1.0 0 0.0 2 Unmodified _RPRGPEGVGSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 18.3397198061782 0.6536596255577894 4 RPR 3 8 23.672 0.0 0.0 2.1068 0.0 0.0 0.0 711.3324679010374 711.3324679010374 8.723637474483468 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + RPR 2.1068 + + 21 + 1 1.83 66889.3 1.0 3172 4433 7605 HBL1_DMSO_200M_050219_2,7607 HBL1_DMSO_200M_050219_2,7607,RPRGPEGVGSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7608 41.122 137.0 428300.0 25 0 26084.0 25037 MPTHQQSI 8 79 471.2300881821903 940.4456234311806 2 471.2296935915947 MULTI CID FTMS 0 0 0 7605 292897.90625 0.3871421125880822 -28 1.3656997680664062 3 Unmodified _MPTHQQSI_ ENST00000327906.7_1_3:52453897-52455742:+|nuORF 16.942295170755138 0.6606234159769251 4 MPPPYHS{I|L} 8 4 + 73.48 0.0 0.0 7.8133 7.8133 94.845 0.0 0.0 0.0 59.5006419075002 13.214562785677655 13.214562785677655 18.08622918369565 0 0.805462187404089 2.0 0.0 0.0 MPPPYHS{I|L};MP{[QN]|[E{I|L}]|[KN]}DHS{I|L};M[YK]YHS{I|L} 7.8133;5.8902;2.4749 -;-;- 89 + 1 1.83 53443.3 1.0 3173 4433 7605 HBL1_DMSO_200M_050219_2,7608 HBL1_DMSO_200M_050219_2,7608,MPTHQQSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7609 41.129 410.0 226560.0 25 0 37541.0 33176 SFAGCITQCY 10 119 546.7280822737471 1091.441611614294 2 546.7279540896416 MULTI CID FTMS 0 0 0 7605 246081.03125 0.3686920321791373 -12 0.5868988037109375 4 Unmodified _SFAGCITQCY_ ENSG00000255804|ENST00000540461|OR6J1 13.042465956692816 0.6287021003332052 4 [VS]Q[VP]AQW 8 8 37.664 0.0 0.0 3.4508 0.0 0.0 0.0 192.9312639853031 192.9312639853031 20.23001272063737 0.0 0.0 0.0 0 0.0 2.0 0.5752574989159953 0.3494850021680094 [VS]Q[VP]AQW 3.4508 - 623 1 1.83 75530.8 1.0 3174 4433 7605 HBL1_DMSO_200M_050219_2,7609 HBL1_DMSO_200M_050219_2,7609,SFAGCITQCY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7610 41.133 211.0 289040.0 25 0 21586.0 -1 PEEICRCL 8 108 538.7471919053695 1075.479830877539 2 538.7477905154228 MULTI CID FTMS 0 0 0 7605 236373.203125 0.8659426648637887 -2 0.0847892761230468 5 2 Carbamidomethyl (C) _PEEIC(Carbamidomethyl (C))RC(Carbamidomethyl (C))L_ ENSG00000156958|ENST00000560031|GALK2;ENST00000560119.5_1_15:49527865-49611209:+|nuORF;ENST00000561014.1_1_15:49531438-49610381:+|nuORF;nc|ENSG00000156958|Q01415-2|GALK2 18.13498045792455 0.6430038125133779 4 [EP]TVS 5 -1 31.51 0.0 0.0 2.9299 0.0 0.0 0.0 559.2134493463499 559.2134493463499 16.627946838353576 0.0 0.0 0.0 0 0.2302046884880938 1.0 0.0 0.0 [EP]TVS 2.9299 - 282 + 1 1.83 56571.8 1.0 3175 4433 7605 HBL1_DMSO_200M_050219_2,7610 HBL1_DMSO_200M_050219_2,7610,PEEICRCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7612 41.138 17.0 2873200.0 25 0 239370.0 + 4354 DASPVTNNTI 10 105 516.2536839735342 1030.4928150138685 2 516.2541381716728 MULTI CID FTMS 0 0 0 7611 3449166.5 0.9088970839685896 -4 0.1801261901855468 1 Unmodified _DASPVTNNTI_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 34.40172386719151 0.2166836008404837 4 {[DA]|[EG]}SPVG 6 5 34.759 0.0 0.0 3.3731 0.0 0.0 0.0 501.2281415121683 501.2281415121683 1.7080884309298838 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3807196863200844 0.0 {[DA]|[EG]}SPVG 3.3731 - 963 1 1.83 46275.8 1.0 3176 4434 7611 HBL1_DMSO_200M_050219_2,7612 HBL1_DMSO_200M_050219_2,7612,DASPVTNNTI False True DASPVTNNTI 41.138044 516.254138171673 30795910.0 7611.0 nc|ENSG00000122779|O15164-2|TRIM24;;ENSG00000122779|ENST00000343526|TRIM24 4.1414932409922285 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7613 41.142 232.0 322220.0 25 0 29426.0 + 44780 YPLSKAQTV 9 122 503.7820742905152 1005.5495956478304 2 503.7820922732353 MULTI CID FTMS 0 0 0 7611 253623.859375 0.0409266726880985 17 -0.5383415222167969 2 Unmodified _YPLSKAQTV_ ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3 58.6788170122104 0.0268135626297836 4 YP{I|L}E 4 6 63.972 0.0 0.0 6.3619 0.0 0.0 0.0 500.26804529361567 500.26804529361567 45.1497720194672 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 1.1549471895720984 0.0 YP{I|L}E 6.3619 - 661 + 1 1.83 61787.5 1.0 3177 4434 7611 HBL1_DMSO_200M_050219_2,7613 HBL1_DMSO_200M_050219_2,7613,YPLSKAQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7615 41.15 269.0 318010.0 25 0 35427.0 + 16363 IYPGYHQSSY 10 78 607.7774698752676 1213.540386817335 2 607.7776977419853 MULTI CID FTMS 0 0 0 7614 311785.09375 0.7663207525504219 2 -0.0406913757324218 1 Unmodified _IYPGYHQSSY_ ENSG00000176986|ENST00000345254|SEC24C 40.23920728925047 0.1550410903091231 4 {I|L}YP[NG]SQWSY 10 3 + 92.172 0.0 0.0 7.5953 7.5953 89.391 0.0 0.0 0.0 64.69318990042758 15.026975159433531 15.026975159433531 8.45098040014257 0 0.4247425010840047 2.0 0.7742275032520141 0.3807196863200844 {I|L}YP[NG]SQWSY;{I|L}Y[HM]SQVSSY;{I|L}YP[NG]S[AG]WSY;{I|L}Y[HM]SVQSSY;{I|L}Y[HM]S[AG]VSSY;{I|L}YP[NG]WQSSY;{I|L}Y[HM]SV[AG]SSY;{I|L}YP[YG]HQSSY;{I|L}YP[NG]W[AG]SSY;{I|L}YP[YG]H[AG]SSY 7.5953;6.8989;6.5264;6.3266;5.83;5.7249;5.2577;5.2288;4.9697;4.4736 -;-;-;-;-;-;-;+;-;- + 942 + 1 1.83 68184.4 1.0 3178 4435 7614 HBL1_DMSO_200M_050219_2,7615 HBL1_DMSO_200M_050219_2,7615,IYPGYHQSSY False True IYPGYHQSSY 41.149664 607.777697741985 8793645.0 7614.0 ENSG00000176986|ENST00000345254|SEC24C 8.168094317118326 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7616 41.16 612.0 200190.0 25 0 28873.0 + + 2845 AVAAADPRL 9 125 442.2533628577834 0 442.2523071169853 PEAK CID FTMS 0 0 0 7614 127821.9375 0.4564284200674862 -8 0.3911361694335937 2 Unmodified _AVAQELPR_ ENST00000336273.7_1_8:98656420-98656720:+|nuORF 28.486842064014134 0.2575685520298453 4 AAAD{I|L}W 6 -1 31.235 0.0 0.0 3.5394 0.0 0.0 170.10311389086127 82.06688867740468 252.170002568266 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 AAAD{I|L}W 3.5394 - 395 + 1 1.83 98275.6 1.0 3179 4435 7614 HBL1_DMSO_200M_050219_2,7616 HBL1_DMSO_200M_050219_2,7616,AVAQELPR False False AVAAADPRL 41.160352 442.252307116985 2146817.75 7614.0 ENST00000336273.7_1_8:98656420-98656720:+|nuORF 3.981891949971517 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7618 41.169 366.0 254410.0 25 0 71856.0 -1 0 89 576.3057533916541 575.298476925054 1 576.3062621951103 MULTI CID FTMS 0 0 0 7617 197746.546875 0.7428120410901498 -5 0.1317024230957031 1 4 V{M(Oxidation (M))|F}PT{I|L} 5 -1 + 38.621 0.0 0.0 6.7131 6.7131 85.33 0.0 0.0 0.0 14.51544993495972 6.670175336041453 6.670175336041453 6.670175336041453 0 0.9247425010840048 0.0 0.4247425010840047 0.0 V{M(Oxidation (M))|F}PT{I|L};V{M(Oxidation (M))|F}{I|L}[TP];[{M(Oxidation (M))|F}V]PT{I|L} 6.7131;5.5537;3.9018 -;-;- 38 + 1 1.83 76012.2 1.0 3180 4436 7617 HBL1_DMSO_200M_050219_2,7618 HBL1_DMSO_200M_050219_2,7618, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7619 41.183 800.0 105650.0 25 0 6438.1 + 33291 SFQNMKNQY 9 128 580.2628142956411 1158.511075658082 2 580.2645141482353 MULTI CID FTMS 0 0 0 7617 94496.296875 1.0 0 0.0 2 Unmodified _SFQNMKNQY_ ENSG00000119596|ENST00000325680|YLPM1 22.736283301280096 0.2418982879461534 4 {[TV]|[{I|L}S]}VCDEAQ 8 7 41.552 0.0 0.0 3.5867 0.0 0.0 0.0 310.12382854543813 310.12382854543813 15.661837734644593 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.5 0.0 {[TV]|[{I|L}S]}VCDEAQ 3.5867 - 785 1 1.83 65004.6 0.5600000023841858 3181 4436 7617 HBL1_DMSO_200M_050219_2,7619 HBL1_DMSO_200M_050219_2,7619,SFQNMKNQY False True SFQNMKNQY 41.183081 580.264514148235 684220.6875 7617.0 ENSG00000119596|ENST00000325680|YLPM1 3.180343548456828 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7622 41.203 800.0 78979.0 25 0 8211.8 -1 ILWLKFCPQNL 11 93 716.3944174224329 0 716.3956786990166 PEAK CID FTMS 0 0 0 7621 51896.37109375 0.5833983750790535 3 -0.06158447265625 1 Carbamidomethyl (C) _ILWLKFC(Carbamidomethyl (C))PQNL_ ENST00000522142.1_1_8:38853185-38854124:-|nuORF 13.042465956692816 0.4221659143281722 4 {I|L}DQ{I|L}E 5 -1 31.52 0.0 0.0 2.203 0.0 0.0 732.4133332806094 97.0411623590453 829.4544956396547 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 {I|L}DQ{I|L}E 2.203 - 255 + 1 1.83 47392.9 0.6600000262260437 3182 4438 7621 HBL1_DMSO_200M_050219_2,7622 HBL1_DMSO_200M_050219_2,7622,ILWLKFCPQNL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7623 41.217 800.0 87887.0 25 0 9005.0 1172 AHQSEEKGAAL 11 84 570.7855262026552 1139.5564994721103 2 570.7854492068291 MULTI CID FTMS 0 0 0 7621 80741.4765625 0.841368109970996 -4 0.0534744262695312 2 Unmodified _AHQSEEKGAAL_ ENSG00000187796|ENST00000371732|CARD9;ENST00000556340.1_1_9:139265151-139266545:-|nuORF;nc|ENSG00000289701|Q9H257-2|CARD9;nc|ENSG00000289701|Q9H257-3|CARD9 27.22323531849824 0.4529927607131788 4 [VP]TDGNE[PG]AA{I|L} 12 7 + 56.905 0.0 0.0 4.9936 4.9936 74.596 0.0 0.0 0.0 13.46787486224656 16.61181443446617 13.46787486224656 3.601514477826377 0 0.9247425010840048 1.0457574905606752 1.274227503252014 0.0 [VP]TDGNE[PG]AA{I|L};[VP]TDGN[WP]AA{I|L};[VP]TD{[WN]|[YH]}[PG]AA{I|L};[VP]TDGNE[QP]A{I|L};[VP]TDGGGE[PG]AA{I|L};[VP]TD{[WN]|[YH]}[QP]A{I|L};[VP]TDGGG[WP]AA{I|L};{[TV]|[{I|L}S]}PDGNE[PG]AA{I|L};[VP]TDGGGE[QP]A{I|L};{[TV]|[{I|L}S]}PDGN[WP]AA{I|L} 4.9936;4.6775;4.662;4.3933;4.1952;4.0648;3.8765;3.8117;3.5922;3.4957 -;-;-;-;-;-;-;-;-;- 436 1 1.83 62490.5 0.7300000190734863 3183 4438 7621 HBL1_DMSO_200M_050219_2,7623 HBL1_DMSO_200M_050219_2,7623,AHQSEEKGAAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7625 41.221 24.0 1993000.0 25 0 157670.0 + 15467 IPRNQLQSV 9 77 527.803352500111 1053.592152067022 2 527.8041259646416 MULTI CID FTMS 0 0 0 7624 1718198.0 0.8502072667149245 3 -0.0517158508300781 1 Unmodified _IPRNQLQSV_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4 19.256988751693697 0.3154191944385105 4 PHP[VP][HA]SV 9 7 31.928 0.0 0.0 3.0304 0.0 0.0 114.09785432030851 0.0 114.09785432030851 0.0 15.73023197994765 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 PHP[VP][HA]SV 3.0304 - 135 + 1 1.828 44358.7 1.0 3184 4439 7624 HBL1_DMSO_200M_050219_2,7625 HBL1_DMSO_200M_050219_2,7625,IPRNQLQSV False True IPRNQLQSV 41.221462 527.804125964642 14578805.0 7624.0 ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4 2.981728434562683 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7626 41.224 137.0 362290.0 25 0 45601.0 + -1 GEVMSEMNL 9 74 513.2171555276142 1024.4197581220285 2 513.2177001833916 MULTI CID FTMS 0 0 0 7624 429355.15625 0.0162847192511705 18 -0.8444404602050781 2 Oxidation (M) _GEVM(Oxidation (M))SEMNL_ REV__ENSG00000083307|ENST00000646743|GRHL2;REV__nc|ENSG00000083307|Q6ISB3-2|GRHL2 19.256988751693697 0.3154191944385105 4 {[DA]|[EG]}V 3 -1 36.695 0.0 0.0 3.582 0.0 0.0 0.0 736.2658657381545 736.2658657381545 3.3175623520757824 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V 3.582 + + 53 + 1 1.828 45100.8 1.0 3185 4439 7624 HBL1_DMSO_200M_050219_2,7626 HBL1_DMSO_200M_050219_2,7626,GEVMSEMNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7628 41.229 103.0 585670.0 25 0 59581.0 + 2231 AQDEPAESL 9 97 480.2194861603424 958.4244193874848 2 480.2195312380791 MULTI CID FTMS 0 0 0 7627 665175.375 0.8704197547584646 -3 0.0411491394042968 1 Unmodified _AQDEPAESL_ ENSG00000141582|ENST00000269397|CBX4;nc|ENSG00000141582|O00257-3|CBX4 49.93300154707207 0.0405168250806675 4 [PA]ES{I|L} 5 4 27.396 0.0 0.0 2.8584 0.0 0.0 0.0 458.1535508174255 458.1535508174255 -0.5938593453571848 0.0 -0.5938593453571848 0.0 0 0.0 0.9208187539523752 0.3494850021680094 0.0 + [PA]ES{I|L} 2.8584 + + 149 1 1.828 53981.2 1.0 3186 4440 7627 HBL1_DMSO_200M_050219_2,7628 HBL1_DMSO_200M_050219_2,7628,AQDEPAESL True True AQDEPAESL 41.228758 480.219531238079 37028613.0 7627.0 ENSG00000141582|ENST00000269397|CBX4;;nc|ENSG00000141582|O00257-3|CBX4 6.128320852915446 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7629 41.231 113.0 501730.0 25 0 39808.0 + 31537 RQLDTETNL 9 93 545.2804239226499 1088.5462949120997 2 545.2810546755791 MULTI CID FTMS 0 0 0 7627 519675.25 0.3721121692005947 -7 0.11077880859375 2 Unmodified _RQLDTETNL_ ENSG00000047410|ENST00000367478|TPR 34.221707139014875 0.1071766711162635 4 DTETN{I|L} 6 3 57.3 0.0 0.0 5.2639 0.0 0.0 397.2444020001969 0.0 397.2444020001969 0.0 43.5984549006748 0.0 0.0 0 0.7614393726401688 0.0 0.9247425010840048 0.3807196863200844 + DTETN{I|L} 5.2639 + + 517 1 1.828 49268.8 1.0 3187 4440 7627 HBL1_DMSO_200M_050219_2,7629 HBL1_DMSO_200M_050219_2,7629,RQLDTETNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7630 41.233 99.0 509680.0 25 0 51775.0 7509 EHGGGHGVHAL 11 86 535.7588152530392 1069.5030775728785 2 535.7586547732353 MULTI CID FTMS 0 0 0 7627 451384.40625 0.4700787629128212 -6 0.0907135009765625 3 Unmodified _EHGGGHGVHAL_ ENST00000480510.5_1_22:37678610-37692439:+|nuORF 18.1463463914782 0.6576820063886638 4 EDT[WK]A{I|L} 7 8 46.445 0.0 0.0 4.3427 0.0 0.0 208.0842065785408 0.0 208.0842065785408 0.0 40.24690718274137 0.0 0.0 0 2.274227503252014 0.0 0.3252574989159953 0.0 EDT[WK]A{I|L} 4.3427 - 76 + 1 1.828 46032.8 1.0 3188 4440 7627 HBL1_DMSO_200M_050219_2,7630 HBL1_DMSO_200M_050219_2,7630,EHGGGHGVHAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7631 41.242 513.0 417440.0 25 0 99751.0 + 21878 LPPESTQV 8 148 435.7319671401997 869.4493813471995 2 435.7318908572197 MULTI CID FTMS 0 0 0 7627 221686.984375 0.6824125504175049 -16 0.5603675842285156 4 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 44.40701690623563 0.1655546087385432 4 [{I|L}P][EP]STQV 8 0 + 29.223 0.0 0.0 3.3611 3.3611 68.565 0.0 0.0 0.0 3.2176489919579865 4.57039304039391 3.2176489919579865 3.408896712421523 0 0.7914478256039673 1.6989700043360187 0.9247425010840048 0.0 + + [{I|L}P][EP]STQV;[EP]PS{I|L}TQV;[EP]P{I|L}STQV;[EP]SP{I|L}TQV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}P{[DA]|[EG]}QV;[TP]DP{I|L}TQV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}P{[DA]|[EG]}[AG]V 3.3611;2.9691;2.8395;2.2178;2.0241;1.3997;0.032452 +;-;-;-;-;-;- + 340 1 1.828 167467.3 1.0 3189 4440 7627 HBL1_DMSO_200M_050219_2,7631 HBL1_DMSO_200M_050219_2,7631,LPPESTQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7632 41.249 348.0 270460.0 25 0 40035.0 + 34193 SLNRFQVL 8 113 488.782987973846 975.551423014492 2 488.7822448611259 MULTI CID FTMS 0 0 0 7627 168983.96875 0.3107179714075572 18 -0.9109611511230468 5 Unmodified _SLNRFQVL_ REV__ENSG00000113658|ENST00000545279|SMAD5 16.942295170755138 0.6606234159769251 4 SV{I|L} 3 -1 22.135 0.0 0.0 2.269 0.0 0.0 658.3554554669937 0.0 658.3554554669937 0.0 5.65934310155658 0.0 0.0 0 0.7429928190999391 0.0 0.4247425010840047 0.0 SV{I|L} 2.269 - 202 1 1.828 75191.0 1.0 3190 4440 7627 HBL1_DMSO_200M_050219_2,7632 HBL1_DMSO_200M_050219_2,7632,SLNRFQVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7634 41.257 358.0 335090.0 25 0 32300.0 36962 TFEDRLCLPS 10 129 394.1930017849122 1179.5571759549368 3 394.1927673220634 MULTI CID FTMS 0 0 0 7633 129443.171875 0.1832855625890115 -7 0.1150588989257812 1 Unmodified _TFEDRLCLPS_ ENSG00000206107|ENST00000382835|KRTAP27-1 20.41453444215458 0.5050059513928961 4 TESYSYKR{M(Oxidation (M))|F} 9 8 + 86.368 0.0 0.0 7.3221 7.3221 95.276 0.0 0.0 0.0 68.40959357930545 10.48564692360155 10.48564692360155 42.54554718523508 0 0.2887254899964357 1.6989700043360187 0.8807196863200843 0.75 TESYSYKR{M(Oxidation (M))|F};TE{M(Oxidation (M))|F}{[NV]|[RG]}[HM]R{M(Oxidation (M))|F};TE{M(Oxidation (M))|F}[RD][{I|L}V][WD];T{M(Oxidation (M))|F}E{[NV]|[RG]}[HM]R{M(Oxidation (M))|F};T{M(Oxidation (M))|F}E[RD][{I|L}V][WD];{[MG]|[TS]}M[{I|L}V][RD]{M(Oxidation (M))|F}[DP] 7.3221;3.7152;3.4781;1.9857;1.4258;0.45415 -;-;-;-;-;- 188 + 1 1.828 100778.9 1.0 3191 4441 7633 HBL1_DMSO_200M_050219_2,7634 HBL1_DMSO_200M_050219_2,7634,TFEDRLCLPS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7635 41.263 326.0 353360.0 25 0 26622.0 + 32520 SALPHVHTV 9 124 320.84709579481154 959.5194579846346 3 320.8468505740166 MULTI CID FTMS 0 0 0 7633 219180.96875 0.9134311326766348 5 -0.1178932189941406 2 Unmodified _SALPHVHTV_ ENSG00000166340|ENST00000299427|TPP1;nc|ENSG00000166340|O14773-2|TPP1 48.345845343767074 0.0439967357579942 4 PHVHTV 6 3 31.151 0.0 0.0 3.2465 0.0 0.0 271.1528389732288 0.0 271.1528389732288 0.0 -3.9862747447027296 -3.9862747447027296 0.0 0 0.0 0.0 1.5189301784845295 0.0 + PHVHTV 3.2465 + + 189 + 1 1.828 97756.6 1.0 3192 4441 7633 HBL1_DMSO_200M_050219_2,7635 HBL1_DMSO_200M_050219_2,7635,SALPHVHTV True True SALPHVHTV 41.263214 320.846850574017 3928469.5 7633.0 ENSG00000166340|ENST00000299427|TPP1;;nc|ENSG00000166340|O14773-2|TPP1 7.324606577555339 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7636 41.269 296.0 332300.0 25 0 112170.0 + 8731 EVLQRMSL 8 106 488.26782104312025 0 488.2668945193291 PEAK CID FTMS 0 0 0 7633 121702.921875 0.6382804177306057 -3 0.06158447265625 3 Unmodified _EVLQRMSL_ REV__CON__Q9D646 13.50788311687929 0.5021269579892848 4 VS 2 -1 12.959 0.0 0.0 1.3298 0.0 0.0 130.065841205578 655.3303316705686 785.3961728761467 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 VS 1.3298 - 91 + 1 1.828 80506.5 1.0 3193 4441 7633 HBL1_DMSO_200M_050219_2,7636 HBL1_DMSO_200M_050219_2,7636,EVLQRMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7638 41.273 19.0 2225400.0 25 0 354460.0 + -1 SACFMNDTV 9 68 530.7069072038664 1059.3992614745328 2 530.7074462771416 MULTI CID FTMS 0 0 0 7637 3105840.25 0.9235896894909282 1 -0.0045356750488281 1 Carbamidomethyl (C),Oxidation (M) _SAC(Carbamidomethyl (C))FM(Oxidation (M))NDTV_ REV__ENSG00000149090|ENST00000619888|PAMR1;REV__nc|ENSG00000149090|Q6UXH9-2|PAMR1;REV__nc|ENSG00000149090|Q6UXH9-3|PAMR1 12.531546534597751 0.4974689918368763 4 GVTY{[RE]|[WV]} 6 -1 27.893 0.0 0.0 2.6329 0.0 0.0 336.0566578595719 0.0 336.0566578595719 0.0 8.199849938126889 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 GVTY{[RE]|[WV]} 2.6329 - 101 1 1.828 39103.5 1.0 3194 4442 7637 HBL1_DMSO_200M_050219_2,7638 HBL1_DMSO_200M_050219_2,7638,SACFMNDTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7641 41.293 800.0 129510.0 25 0 8643.2 + 36293 SYIHKAYSDP 10 114 590.7855922175313 1179.5566315018625 2 590.7853881716728 MULTI CID FTMS 0 0 0 7640 83989.578125 0.3027708434250695 -3 0.0283546447753906 1 Unmodified _SYIHKAYSDP_ REV__ENSG00000137270|ENST00000259803|GCM1 39.21299971606389 0.1658776112144286 4 TESYSYK[R{M(Oxidation (M))|F}] 9 -1 + 88.07 0.0 0.0 7.4664 7.4664 94.301 0.0 0.0 0.0 66.81540340012745 4.137342758552691 4.137342758552691 20.14645333192 0 0.8494850021680094 2.0 0.8494850021680094 0.4247425010840047 TESYSYK[R{M(Oxidation (M))|F}];TE{M(Oxidation (M))|F}[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}S[DP];TE{M(Oxidation (M))|F}[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}D[PS];TESYS{[QV]|[N{I|L}]|[RA]|[KV]}[NG][VP];TE{M(Oxidation (M))|F}CS{[QV]|[N{I|L}]|[RA]|[KV]}[NG][VP];TESY[WK][NG][VP];TE{M(Oxidation (M))|F}C[WR][NP]K;T{M(Oxidation (M))|F}E[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}S[DP];T{M(Oxidation (M))|F}E[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}D[PS];{[ET]|[MV]}S{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}V]EET 7.4664;5.7584;4.7419;4.5261;4.5261;4.3731;4.3057;3.8714;3.7665;3.2561 -;-;-;-;-;-;-;-;-;- 634 + 1 1.828 81633.2 0.7699999809265137 3195 4444 7640 HBL1_DMSO_200M_050219_2,7641 HBL1_DMSO_200M_050219_2,7641,SYIHKAYSDP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7642 41.3 367.0 403310.0 25 0 17811.0 -1 0 161 366.22807939113886 730.4416058490777 2 366.2278015017509 MULTI CID FTMS 0 0 0 7640 234587.015625 0.9960908250726986 5 -0.2272796630859375 2 4 [{I|L}P]HEK 5 -1 20.718 0.0 0.0 2.8364 0.0 0.0 0.0 123.09232124547889 123.09232124547889 1.3663566586953309 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.3494850021680094 0.0 [{I|L}P]HEK 2.8364 - 112 1 1.828 117600.1 1.0 3196 4444 7640 HBL1_DMSO_200M_050219_2,7642 HBL1_DMSO_200M_050219_2,7642, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7643 41.313 800.0 250110.0 25 0 20002.0 + + 36089 SVVGHDVSV 9 180 449.7401068428663 0 449.7372314333916 PEAK CID FTMS 0 0 0 7640 111954.1015625 0.5956539092262951 -1 0.0037460327148437 3 Unmodified _SVRHDVSV_ ENST00000479994.1_1_3:121377041-121379717:-|nuORF;ENSG00000180353|ENST00000314583|HCLS1;ENST00000468693.5_1_3:121376124-121379717:-|nuORF;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;ENST00000488033.5_1_3:121372652-121379717:-|nuORF;nc|ENSG00000180353|P14317-2|HCLS1 49.93300154707207 0.1072524555144024 4 SVSVD 5 -1 25.107 0.0 0.0 2.7976 0.0 0.0 117.07797872303884 290.1271151178344 407.2050938408733 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.024227503252014 0.0 SVSVD 2.7976 - 790 + 1 1.828 154238.1 0.6600000262260437 3197 4444 7640 HBL1_DMSO_200M_050219_2,7643 HBL1_DMSO_200M_050219_2,7643,SVRHDVSV False False SVVGHDVSV 41.313453 449.737231433392 5084872.0 7640.0 ENST00000479994.1_1_3:121377041-121379717:-|nuORF;;ENSG00000180353|ENST00000314583|HCLS1;;ENST00000468693.5_1_3:121376124-121379717:-|nuORF;;ENST00000481314.5_1_3:121363541-121379717:-|nuORF;;ENST00000487290.5_1_3:121363549-121379717:-|nuORF;;ENST00000488033.5_1_3:121372652-121379717:-|nuORF;;nc|ENSG00000180353|P14317-2|HCLS1 4.210583209991455 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7645 41.318 4.9 11011000.0 25 0 1101400.0 + 24979 MPPPPPQGV 9 90 460.23852327962805 918.462493626056 2 460.2389709353447 MULTI CID FTMS 0 0 0 7644 11527477.0 0.6220293754936719 -13 0.2353439331054687 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 4 {[RE]|[WV]}HP[QP]GV 8 4 + 38.298 0.0 0.0 4.1698 4.1698 83.109 0.0 0.0 0.0 13.231661347003424 12.796517645449 12.796517645449 38.298414468456826 0 1.2887254899964358 0.0 0.0 0.3807196863200844 {[RE]|[WV]}HP[QP]GV 4.1698 - 399 + 1 1.828 48929.9 1.0 3198 4445 7644 HBL1_DMSO_200M_050219_2,7645 HBL1_DMSO_200M_050219_2,7645,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7646 41.319 25.0 1853900.0 25 0 302940.0 + 32021 RVIEGDVVSA 10 51 522.787141873563 1043.559730813926 2 522.7879516482353 MULTI CID FTMS 0 0 0 7644 2362950.5 0.923458606654278 4 -0.1907386779785156 2 Unmodified _RVIEGDVVSA_ ENSG00000169756|ENST00000544547|LIMS1;ENSG00000256671|ENST00000632897|LIMS4;ENSG00000256977|ENST00000480744|LIMS3;ENST00000603767.1_1_2:111195993-111209584:-|nuORF;nc|ENSG00000169756|P48059-3|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059|LIMS1 23.78978130925829 0.4341852049148378 4 [VS]A[HK]{M(Oxidation (M))|F}VVSA 10 5 [VS]A[HK]{M(Oxidation (M))|F}V + + 34.296 21.672 2.8204 3.2865 3.2865 46.641 0.0 0.0 0.0 0.0 12.624022127867672 0.0 0.0 0 1.0 0.0 0.6549471895720984 0.0 [VS]A[HK]{M(Oxidation (M))|F}VVSA 3.2865 - 54 + 1 1.828 46103.4 1.0 3199 4445 7644 HBL1_DMSO_200M_050219_2,7646 HBL1_DMSO_200M_050219_2,7646,RVIEGDVVSA False True RVIEGDVVSA 41.319176 522.787951648235 17953864.0 7644.0 ENSG00000169756|ENST00000544547|LIMS1;;nc|ENSG00000169756|P48059-5|LIMS1;;ENST00000603767.1_1_2:111195993-111209584:-|nuORF;;nc|ENSG00000169756|P48059-3|LIMS1;;nc|ENSG00000169756|P48059-4|LIMS1;;ENSG00000256977|ENST00000480744|LIMS3;;ENSG00000256671|ENST00000632897|LIMS4;;nc|ENSG00000169756|P48059|LIMS1 5.825174808502197 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7647 41.32 22.0 2584700.0 25 0 310930.0 + 5687 DPHSFPRTV 9 101 352.5139443299147 1054.520003589944 3 352.5136596560478 MULTI CID FTMS 0 0 0 7644 2245985.25 0.9437946825476784 6 -0.3583869934082031 3 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 20.41453444215458 0.284085796332423 4 [WY]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PR{[TV]|[{I|L}S]} 8 3 + 31.8 0.0 0.0 3.0156 3.0156 76.377 0.0 0.0 0.0 11.878713199345722 0.3786035696905898 0.3786035696905898 10.51152522447381 0 0.2614393726401688 1.6989700043360187 0.0 0.5752574989159953 [WY]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PR{[TV]|[{I|L}S]};[DP]H{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PR{[TV]|[{I|L}S]};[WY]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[K{I|L}][DP];{[ET]|[MV]}[K{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{[HG]|PP} 3.0156;2.0188;1.1674;0.1706 -;+;-;- + 84 + 1 1.828 51000.0 1.0 3200 4445 7644 HBL1_DMSO_200M_050219_2,7647 HBL1_DMSO_200M_050219_2,7647,DPHSFPRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7648 41.322 55.0 1001800.0 25 0 119390.0 + 2132 APVPAPERK 9 69 482.78254305279614 963.5505331723924 2 482.7824890017509 MULTI CID FTMS 0 0 0 7644 1065155.875 0.8209051042517336 10 -0.6224250793457031 4 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 28.486842064014134 0.1687311288560894 4 [PA]APV 5 -1 52.263 0.0 0.0 5.424 0.0 0.0 0.0 525.2799395408058 525.2799395408058 20.83613437787733 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.0 0.0 [PA]APV 5.424 - 82 + 1 1.828 48108.9 1.0 3201 4445 7644 HBL1_DMSO_200M_050219_2,7648 HBL1_DMSO_200M_050219_2,7648,APVPAPERK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7649 41.323 35.0 2237700.0 25 0 391630.0 + 33303 SFSITKIESL 10 91 375.5438403944079 1123.6096917834236 3 375.5436889529228 MULTI CID FTMS 0 0 0 7644 905566.9375 0.3112162794120389 12 -0.7479019165039062 5 Unmodified _SFSITKIESL_ REV__ENSG00000176219|ENST00000315519|OR11H6 17.11289562659939 0.5604042439455784 4 RGS{I|L} 4 -1 33.761 0.0 0.0 3.0047 0.0 0.0 692.3731681652097 0.0 692.3731681652097 0.0 22.791681396006 0.0 0.0 0 0.7302046884880937 0.0 0.3807196863200844 0.0 RGS{I|L} 3.0047 - 102 1 1.828 66238.1 1.0 3202 4445 7644 HBL1_DMSO_200M_050219_2,7649 HBL1_DMSO_200M_050219_2,7649,SFSITKIESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7650 41.326 170.0 515220.0 25 0 28080.0 + 36503 TAELGIRHV 9 111 332.5260803025516 994.5564115078548 3 332.5257446169853 MULTI CID FTMS 0 0 0 7644 331518.25 0.4677916212408742 12 -0.7479019165039062 6 Unmodified _TAELGIRHV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 34.93206674587334 0.1032771302489716 4 TAE{I|L}G{I|L}RHV 9 0 + 69.104 0.0 0.0 6.9482 6.9482 94.795 0.0 0.0 0.0 42.82710378649153 7.931825014007217 7.931825014007217 69.10351040942807 0 0.3182503180159344 2.0 0.0 0.6747425010840047 + + TAE{I|L}G{I|L}RHV 6.9482 + + 88 + 1 1.828 73070.6 1.0 3203 4445 7644 HBL1_DMSO_200M_050219_2,7650 HBL1_DMSO_200M_050219_2,7650,TAELGIRHV True True TAELGIRHV 41.326245 332.525744616985 18642073.0 7644.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 5.5075257619222 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7651 41.34 800.0 221780.0 25 0 8051.9 9271 FHSGDKTMEC 10 172 577.7334249847149 1153.4522970362298 2 577.7343017458916 MULTI CID FTMS 0 0 0 7644 214814.1875 0.4639694508822268 -4 0.0648956298828125 7 Unmodified _FHSGDKTMEC_ ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3 13.042465956692816 0.6287021003332052 4 {[{M(Oxidation (M))|F}C]|[YS]}CEVSNHC{I|L} 10 9 + 67.344 0.0 0.0 5.8384 5.8384 80.066 0.0 0.0 0.0 4.842757820673015 4.842757820673015 4.842757820673015 4.842757820673015 0 1.305462187404089 0.0 1.1861818737241734 0.4247425010840047 {[{M(Oxidation (M))|F}C]|[YS]}CEVSNHC{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HNSVEC[MT];{[{M(Oxidation (M))|F}C]|[YS]}CEVSNH{I|L}C;{[{M(Oxidation (M))|F}C]|[YS]}CEVSGGHC{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGGSVEC[MT];{[WN]|[YH]}ANSVEC[MT];[HN]YASVEC[MT];{[{M(Oxidation (M))|F}C]|[YS]}CEVSA[HM]Q;{[{M(Oxidation (M))|F}C]|[YS]}CA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NHC{I|L};{[{M(Oxidation (M))|F}C]|[YS]}CEVSN{[ES]|[DT]|[{I|L}C]}H 5.8384;5.4186;4.7303;4.6757;4.2558;4.0468;3.9828;3.8043;3.7755;3.745 -;-;-;-;-;-;-;-;-;- 1695 + 1 1.828 134216.2 0.8500000238418579 3204 4445 7644 HBL1_DMSO_200M_050219_2,7651 HBL1_DMSO_200M_050219_2,7651,FHSGDKTMEC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7652 41.344 198.0 330070.0 25 0 24539.0 + 1676 ALPDQGIAKA 10 111 492.2802795309003 982.5460061286008 2 492.2798339724541 MULTI CID FTMS 0 0 0 7644 139762.125 0.0140062517080382 17 -0.9824943542480468 8 Unmodified _ALPDQGIAKA_ ENSG00000089289|ENST00000356413|IGBP1 23.78978130925829 0.4341852049148378 4 [{I|L}A]PDQG{I|L}AKA 10 0 + 41.933 0.0 0.0 4.2678 4.2678 76.799 0.0 0.0 0.0 23.072003099888395 3.1428575103995016 3.1428575103995016 8.069130622369883 0 0.7742275032520141 2.0 0.0 0.0 + + [{I|L}A]PDQG{I|L}AKA;[{I|L}A]P[{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L};[{I|L}A]PD[AG]G{I|L}AKA;[{I|L}A]PDQ[K{I|L}]QA;[{I|L}A]PDQ[Q{I|L}]KA;[{I|L}A]P[{I|L}P]{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{I|L};[{I|L}A]P[{I|L}P]{[WS]|[C(Carbamidomethyl (C)){I|L}]}TV;[{I|L}A]PD[AG][K{I|L}]QA;[{I|L}A]PD[AG][Q{I|L}]KA;[{I|L}A]PDQ[K{I|L}][AG]A 4.2678;3.4465;3.335;3.207;3.2025;3.1871;2.5904;2.2698;2.2653;1.9589 +;-;-;-;-;-;-;-;-;- + 367 + 1 1.828 53284.4 1.0 3205 4445 7644 HBL1_DMSO_200M_050219_2,7652 HBL1_DMSO_200M_050219_2,7652,ALPDQGIAKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7653 41.358 800.0 180590.0 25 0 16656.0 + 43194 VYYASPRSY 9 131 553.269674122359 1104.524795311518 2 553.2694579958916 MULTI CID FTMS 0 0 0 7644 136899.765625 0.5337141551816036 -6 0.0965385437011718 9 Unmodified _VYYASPRSY_ ENSG00000118217|ENST00000367942|ATF6 39.94969957227396 0.0757326808254658 4 VYYAS 5 4 73.003 0.0 0.0 6.6095 0.0 0.0 0.0 518.2368651880618 518.2368651880618 55.52546510005413 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.805462187404089 0.0 + VYYAS 6.6095 + + 327 + 1 1.828 114399.5 0.6899999976158142 3206 4445 7644 HBL1_DMSO_200M_050219_2,7653 HBL1_DMSO_200M_050219_2,7653,VYYASPRSY True True VYYASPRSY 41.357697 553.269457995892 3406363.0 7644.0 ENSG00000118217|ENST00000367942|ATF6 6.55706771214803 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7654 41.366 496.0 308590.0 25 0 13955.0 + 6096 DSRMEIHTV 9 174 363.1785189663047 1086.513727499114 3 363.1780273318291 MULTI CID FTMS 0 0 0 7644 133629.609375 0.2372244136554 -4 0.0648956298828125 10 Unmodified _DSRMEIHTV_ ENSG00000177125|ENST00000319119|ZBTB34;nc|ENSG00000177125|Q8NCN2|ZBTB34 65.47368725323818 0.0230515101691092 4 DSRME{I|L}H{I|L}S 9 2 + 67.95 0.0 0.0 6.2539 6.2539 73.461 0.0 0.0 0.0 25.604028237526748 0.3624270683831838 0.3624270683831838 0.3624270683831838 0 1.4846368802282015 1.2218487496163564 2.43986268792935 0.4247425010840047 DSRME{I|L}H{I|L}S;DSRME{I|L}HTV;DSRME{I|L}HS{I|L};DSRME{I|L}{I|L}HS;[H{I|L}]S{I|L}{M(Oxidation (M))|F}QEVD;D[{M(Oxidation (M))|F}V]QE{I|L}H{I|L}S;D[{M(Oxidation (M))|F}V]QE{I|L}HTV;{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}EQEVD;[MT]EQE{I|L}H{I|L}S;[MT]EQE{I|L}HTV 6.2539;6.2206;5.8767;5.105;4.2058;4.0805;4.0472;3.9506;3.8974;3.864 -;+;-;-;-;-;-;-;-;- + 1504 + 1 1.828 123651.2 1.0 3207 4445 7644 HBL1_DMSO_200M_050219_2,7654 HBL1_DMSO_200M_050219_2,7654,DSRMEIHTV True True DSRMEIHTV 41.36644 363.178027331829 3257207.75 7644.0 nc|ENSG00000177125|Q8NCN2|ZBTB34;;ENSG00000177125|ENST00000319119|ZBTB34 3.472108761469523 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7656 41.371 17.0 3028900.0 25 0 335600.0 6019 DSAPGMAPPPP 11 67 518.7431468910955 1035.471740848991 2 518.7440063357353 MULTI CID FTMS 0 0 0 7655 2963651.25 0.8600308475159116 1 -0.0057106018066406 1 Unmodified _DSAPGMAPPPP_ ENST00000369550.9_1_X:153991041-153991164:+|nuORF 19.256988751693697 0.6345794173041263 4 {[DS]|[MA]|[CV]|TT}AP{M(Oxidation (M))|F}KWW 8 6 + 30.467 0.0 0.0 2.9424 2.9424 73.422 0.0 0.0 0.0 5.022183007410543 15.10619469199147 5.022183007410543 8.812033112643842 0 1.3935078169319297 0.0 0.2887254899964357 0.0 {[DS]|[MA]|[CV]|TT}AP{M(Oxidation (M))|F}KWW;{[DS]|[MA]|[CV]|TT}{[ES]|[DT]|[{I|L}C]}VKWW 2.9424;2.0914 -;- 76 1 1.828 47691.6 1.0 3208 4446 7655 HBL1_DMSO_200M_050219_2,7656 HBL1_DMSO_200M_050219_2,7656,DSAPGMAPPPP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7657 41.372 21.0 2558800.0 25 0 234520.0 + -1 EGSVCVCLAV 10 91 346.1649495094744 1035.4730191286233 3 346.1648742556572 MULTI CID FTMS 0 0 0 7655 2414439.5 0.9536813090073004 1 -0.0057106018066406 2 Carbamidomethyl (C) _EGSVC(Carbamidomethyl (C))VCLAV_ REV__ENST00000423656.5_1_3:51533973-51534006:-|nuORF 13.614867670302877 0.6190977555336379 4 {[DA]|[EG]}SP 4 -1 20.724 0.0 0.0 2.0014 0.0 0.0 0.0 662.3009969941107 662.3009969941107 0.5584810522916719 0.0 0.0 0.0 0 1.0 1.2218487496163564 0.0 0.0 {[DA]|[EG]}SP 2.0014 - 79 1 1.828 56516.8 1.0 3209 4446 7655 HBL1_DMSO_200M_050219_2,7657 HBL1_DMSO_200M_050219_2,7657,EGSVCVCLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7659 41.377 26.0 2162300.0 25 0 165880.0 + 22066 LPPPPQQKI 9 88 509.3084386644216 1016.6023243956432 2 509.3084899783134 MULTI CID FTMS 0 0 0 7658 2136811.25 0.4954266366463076 13 -0.8780441284179688 1 Unmodified _LPPPPQQKI_ ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 32.30548876998284 0.1201446275138228 4 {I|L}PPP 4 5 59.993 0.0 0.0 5.9013 0.0 0.0 0.0 609.3369596654903 609.3369596654903 43.79493455131808 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + {I|L}PPP 5.9013 + + 155 + 1 1.828 54127.8 1.0 3210 4447 7658 HBL1_DMSO_200M_050219_2,7659 HBL1_DMSO_200M_050219_2,7659,LPPPPQQKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7660 41.378 34.0 2400900.0 25 0 373420.0 + 9006 FAYTSRHEI 9 97 375.1894658907057 1122.5465682723172 3 375.1891662478447 MULTI CID FTMS 0 0 0 7658 1090222.875 0.7455195910190776 -2 0.0587081909179687 2 Unmodified _FAYTSRHEI_ ENSG00000117682|ENST00000236342|DHDDS;nc|ENSG00000117682|Q86SQ9-2|DHDDS;nc|ENSG00000117682|Q86SQ9-3|DHDDS 40.23920728925047 0.0741434193262949 4 TYAE 4 7 31.899 0.0 0.0 2.8417 0.0 0.0 640.3299192696019 0.0 640.3299192696019 0.0 10.778266536553346 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 TYAE 2.8417 - 318 1 1.828 68721.6 1.0 3211 4447 7658 HBL1_DMSO_200M_050219_2,7660 HBL1_DMSO_200M_050219_2,7660,FAYTSRHEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7661 41.379 43.0 1290800.0 25 0 104340.0 + 5684 DPHSFPRTV 9 83 528.2666773953116 1054.5188018574231 2 528.2673828005791 MULTI CID FTMS 0 0 0 7658 897831.5 0.9759418607763644 3 -0.2147712707519531 3 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 38.17557092003332 0.0854718145212029 4 DPHS{M(Oxidation (M))|F} 5 4 59.724 0.0 0.0 5.6636 0.0 0.0 0.0 468.2595892147298 468.2595892147298 43.525684359364405 0.0 0.0 0.0 0 0.3807196863200844 1.0457574905606752 0.75 0.0 + DPHS{M(Oxidation (M))|F} 5.6636 + + 153 + 1 1.828 46206.6 1.0 3212 4447 7658 HBL1_DMSO_200M_050219_2,7661 HBL1_DMSO_200M_050219_2,7661,DPHSFPRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7662 41.381 110.0 328670.0 25 0 36561.0 + -1 MQDDNQVMV 9 73 548.2253756757278 1094.4361984182556 2 548.2261840701103 MULTI CID FTMS 0 0 0 7658 474567.8125 0.966886020720264 -1 0.0057106018066406 4 Oxidation (M) _M(Oxidation (M))QDDNQVMV_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 26.268140514670165 0.1969607489560049 4 AQVMV 5 -1 32.633 0.0 0.0 2.9817 0.0 0.0 548.1364613263687 0.0 548.1364613263687 0.0 19.13811573052314 0.0 0.0 0 0.718765315847925 0.0 0.0 0.9247425010840048 AQVMV 2.9817 - 52 1 1.828 34911.9 1.0 3213 4447 7658 HBL1_DMSO_200M_050219_2,7662 HBL1_DMSO_200M_050219_2,7662,MQDDNQVMV False False MQDDNQVMV 41.38144 548.22618407011 4026164.0 7658.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 5.160757382710774 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7663 41.384 116.0 551670.0 25 0 74623.0 + 9007 FAYTSRHEI 9 80 562.2808693473477 1122.5471857614953 2 562.2807494997978 MULTI CID FTMS 0 0 0 7658 376451.53125 0.7518180011698117 -2 0.0587081909179687 5 Unmodified _FAYTSRHEI_ ENSG00000117682|ENST00000236342|DHDDS;nc|ENSG00000117682|Q86SQ9-2|DHDDS;nc|ENSG00000117682|Q86SQ9-3|DHDDS 32.89776655970281 0.1144444835665315 4 TYAE 4 7 36.186 0.0 0.0 3.2235 0.0 0.0 640.3285999982437 0.0 640.3285999982437 0.0 24.92656540603217 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 TYAE 3.2235 - 43 1 1.828 55287.2 1.0 3214 4447 7658 HBL1_DMSO_200M_050219_2,7663 HBL1_DMSO_200M_050219_2,7663,FAYTSRHEI True True FAYTSRHEI 41.383871 562.280749499798 13574372.0 7658.0 nc|ENSG00000117682|Q86SQ9-2|DHDDS;;nc|ENSG00000117682|Q86SQ9-3|DHDDS;;ENSG00000117682|ENST00000236342|DHDDS 6.20458984375 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7664 41.389 276.0 422770.0 25 0 57268.0 + 28012 PMPPRTNE 8 110 471.2300881821903 940.4456234311806 2 471.2300292849541 MULTI CID FTMS 0 0 0 7658 259883.6875 0.3435050837135541 -14 0.25872802734375 6 Unmodified _PMPPRTNE_ REV__ENSG00000101203|ENST00000358894|COL20A1;REV__ENST00000471582.5_1_20:61956720-61961007:+|nuORF;REV__ENST00000479501.5_1_20:61950534-61961007:+|nuORF;REV__nc|ENSG00000101203|Q9P218-2|COL20A1;REV__nc|ENSG00000101203|Q9P218-3|COL20A1 15.847184025352805 0.6768015514314958 4 MPPP 4 -1 56.938 0.0 0.0 6.0544 0.0 0.0 0.0 515.2240084283811 515.2240084283811 44.71971276399756 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 MPPP 6.0544 - 172 + 1 1.828 93444.1 1.0 3215 4447 7658 HBL1_DMSO_200M_050219_2,7664 HBL1_DMSO_200M_050219_2,7664,PMPPRTNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7665 41.403 800.0 201570.0 25 0 35139.0 + -1 DNCFMARFY 9 122 612.2519445370135 1222.489336140827 2 612.2518188357353 MULTI CID FTMS 0 0 0 7658 181850.46875 0.3630776239890168 -3 0.0952491760253906 7 Carbamidomethyl (C) _DNC(Carbamidomethyl (C))FMARFY_ REV__ENSG00000114796|ENST00000242810|KLHL24;REV__ENSG00000172578|ENST00000341319|KLHL6;REV__ENST00000489245.5_1_3:183211997-183273441:-|nuORF;REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24 28.486842064014134 0.1687311288560894 4 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 -1 + 117.85 0.0 0.0 9.6405 9.6405 91.677 0.0 0.0 0.0 6.812412373755876 85.44190571133676 6.812412373755876 7.7815125038364386 0 1.25 0.0 2.4648415687162952 1.6549471895720984 [HD]EAQQDA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQDA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQ[AG]DA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HA[AG]QDA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}QQDA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQWGA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQW{M(Oxidation (M))|F}Y;[HD]EAQ{[DA]|[EG]}GA{M(Oxidation (M))|F}Y 9.6405;9.004;8.8909;8.8909;8.2543;8.2543;7.984;7.8527;7.8364;7.7395 -;-;-;-;-;-;-;-;-;- 3802 1 1.828 121170.5 0.7699999809265137 3216 4447 7658 HBL1_DMSO_200M_050219_2,7665 HBL1_DMSO_200M_050219_2,7665,DNCFMARFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7667 41.407 38.0 1449500.0 25 0 133270.0 7476 EGSFLGDPPI 10 82 516.2536839735342 1030.4928150138685 2 516.2542602419853 MULTI CID FTMS 0 0 0 7666 1088619.125 0.2868643042500087 10 -0.7323837280273438 1 Unmodified _EGSFLGDPPI_ nc|ENSG00000182648|Q8NI28|RNF32-DT 13.90604991867851 0.6142120002215601 4 {[DA]|[EG]}S 3 7 29.181 0.0 0.0 2.8318 0.0 0.0 0.0 754.3739545004495 754.3739545004495 16.706962271689747 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}S 2.8318 + + 57 1 1.828 45710.1 1.0 3217 4448 7666 HBL1_DMSO_200M_050219_2,7667 HBL1_DMSO_200M_050219_2,7667,EGSFLGDPPI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 7668 41.415 429.0 351100.0 25 0 45293.0 + 2818 AVAAADPRL 9 117 442.2533628577834 0 442.2529479861259 PEAK CID FTMS 0 0 0 7666 204236.96875 0.7292923170244939 5 -0.3807754516601562 2 Unmodified _AVAAADPRL_ ENST00000336273.7_1_8:98656420-98656720:+|nuORF 34.40172386719151 0.0892392376003579 4 AAAD{I|L}W 6 5 33.409 0.0 0.0 3.7858 0.0 0.0 170.10306903699853 82.06695734195546 252.170026378954 0.0 0.0 0.0 0.0 0 1.066901560044258 0.0 0.0 0.0 AAAD{I|L}W 3.7858 - 119 + 1 1.828 117023.5 1.0 3218 4448 7666 HBL1_DMSO_200M_050219_2,7668 HBL1_DMSO_200M_050219_2,7668,AVAAADPRL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7669 41.429 800.0 263420.0 25 0 26921.0 + 34924 SQIQEFKEA 9 182 540.2721145298868 1078.5296761265736 2 540.2730590701103 MULTI CID FTMS 0 0 0 7666 222871.609375 0.0861185122262133 -2 0.0363388061523437 3 Unmodified _SQIQEFKEA_ ENSG00000101335|ENST00000279022|MYL9;ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B;ENST00000577510.5_1_18:3252320-3253446:+|nuORF;ENST00000580353.1_1_18:3247898-3253446:+|nuORF;nc|ENSG00000101335|P24844-2|MYL9 57.24910588100465 0.0276051374632116 4 {[QS]|[NT]}{I|L}QE{M(Oxidation (M))|F}KEA 9 0 + 66.353 0.0 0.0 6.1522 6.1522 84.688 0.0 0.0 0.0 16.733715863610257 8.482956231335173 8.482956231335173 8.482956231335173 0 1.25 0.958607314841775 1.4802046884880935 0.5 + + {[QS]|[NT]}{I|L}QE{M(Oxidation (M))|F}KEA;{[QS]|[NT]}{I|L}QE{M(Oxidation (M))|F}{[QS]|[NT]}{I|L};{[QS]|[NT]}{I|L}[AG]E{M(Oxidation (M))|F}KEA;{[QS]|[NT]}{I|L}[AG]E{M(Oxidation (M))|F}{[QS]|[NT]}{I|L};{[QS]|[NT]}{I|L}QEA[YQ]{I|L};{[QS]|[NT]}{I|L}QT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{I|L};{[QS]|[NT]}{I|L}Q{[WT]|[RM]}{[VA]|[{I|L}G]}{M(Oxidation (M))|F};{[QS]|[NT]}{I|L}[AG]EA[YQ]{I|L};{[QS]|[NT]}{I|L}Q{[WT]|[RM]}TC{I|L};{[QS]|[NT]}{I|L}QT[VS]{[VA]|[{I|L}G]}{M(Oxidation (M))|F} 6.1522;5.3656;5.2984;4.5119;3.7431;3.2623;3.1424;2.8893;2.8861;2.7825 +;-;-;-;-;-;-;-;-;- + 3739 + 1 1.828 165452.7 0.8600000143051147 3219 4448 7666 HBL1_DMSO_200M_050219_2,7669 HBL1_DMSO_200M_050219_2,7669,SQIQEFKEA True True SQIQEFKEA 41.428805 540.27305907011 16402966.0 7666.0 nc|ENSG00000101335|P24844-2|MYL9;;ENST00000577510.5_1_18:3252320-3253446:+|nuORF;;ENSG00000101608|ENST00000217652|MYL12A;;ENSG00000101335|ENST00000279022|MYL9;;ENST00000580353.1_1_18:3247898-3253446:+|nuORF;;ENSG00000118680|ENST00000237500|MYL12B 5.196563720703125 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7670 41.443 800.0 210500.0 25 0 11321.0 + 12056 GQEPTLKTV 9 174 486.7718531328821 971.5291533325642 2 486.7716552615166 MULTI CID FTMS 0 0 0 7666 136187.640625 0.8023424582970603 2 -0.18414306640625 4 Unmodified _GQEPTLKTV_ chr18:50375918-50380126|40|22.95|0.95|4.6|+|2|SKA1,SKA1|1;ENSG00000154839|ENST00000285116|SKA1;nc|ENSG00000154839|Q96BD8-2|SKA1 55.50274090549119 0.0285720310785888 4 {[QG]|[NA]}EPT{I|L}KTV 9 0 + 48.094 0.0 0.0 4.9504 4.9504 78.453 0.0 0.0 0.0 7.854956727344309 6.989700043360188 6.989700043360188 6.989700043360188 0 0.9247425010840048 0.4202164033831898 1.024227503252014 0.0 + + {[QG]|[NA]}EPT{I|L}KTV;{[QG]|[NA]}EPT{I|L}KS{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}[RH]KTV;[{I|L}P]TKTVENA;[TP]{I|L}KTVENA;{[QG]|[NA]}{M(Oxidation (M))|F}[RH]KS{I|L};[{I|L}T]PKTVENA;[K{I|L}][TP]TVENA;[K{I|L}]{I|L}{[DA]|[EG]}VENA;[VG]A[{I|L}V]TVENA 4.9504;4.2309;2.8183;2.56;2.2121;2.0989;1.416;1.2252;1.0966;0.91439 +;-;-;-;-;-;-;-;-;- + 931 + 1 1.828 131306.6 0.6299999952316284 3220 4448 7666 HBL1_DMSO_200M_050219_2,7670 HBL1_DMSO_200M_050219_2,7670,GQEPTLKTV True True GQEPTLKTV 41.442619 486.771655261517 1378721.375 7666.0 nc|ENSG00000154839|Q96BD8-2|SKA1;;ENSG00000154839|ENST00000285116|SKA1;;chr18:50375918-50380126|40|22.95|0.95|4.6|+|2|SKA1,SKA1|1 7.180271943410237 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7671 41.456 800.0 179950.0 25 0 31111.0 + 32099 RVLQDLREA 9 138 550.3152883725917 0 550.3152343630791 PEAK CID FTMS 0 0 0 7666 114472.625 0.9288397908292156 2 -0.18414306640625 5 Unmodified _RVLQDLREA_ ENSG00000105808|ENST00000262940|RASA4;ENSG00000170667|ENST00000465829|RASA4B;nc|ENSG00000105808|O43374-2|RASA4 40.72490554402381 0.0581536288891289 4 {M(Oxidation (M))|F}R{I|L}D 4 7 32.088 0.0 0.0 2.9208 0.0 0.0 71.03662905440304 493.2897738092407 564.3264028636437 0.0 0.0 0.0 0.0 0 1.110924374808178 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}R{I|L}D 2.9208 - 159 + 1 1.828 114127.8 0.6399999856948853 3221 4448 7666 HBL1_DMSO_200M_050219_2,7671 HBL1_DMSO_200M_050219_2,7671,RVLQDLREA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7672 41.47 800.0 192260.0 25 0 14893.0 + 21830 LPNPSSKAI 9 165 463.76842389829727 925.5222948633946 2 463.7686645388603 MULTI CID FTMS 0 0 0 7666 106228.890625 0.3353176409662026 -10 0.2158164978027343 6 Unmodified _LPNPSSKAI_ ENSG00000129292|ENST00000395386|PHF20L1;ENST00000361997.9_1_8:133790074-133829825:+|nuORF;ENST00000395383.5_1_8:133790074-133836319:+|nuORF;nc|ENSG00000129292|A8MW92-4|PHF20L1 55.50274090549119 0.0285720310785888 4 {I|L}PNPSSKA{I|L} 9 0 + 67.081 0.0 0.0 7.2479 7.2479 89.5 0.0 0.0 0.0 29.960540961170665 14.092568545288051 14.092568545288051 9.208187539523742 0 1.110924374808178 1.6989700043360187 0.3807196863200844 0.3807196863200844 + + {I|L}PNPSSKA{I|L};{I|L}PGGPSSKA{I|L};{I|L}A{[SA]|[TG]}{I|L}A[QP]GV;{I|L}A{[SA]|[TG]}{I|L}A{[QG]|[NA]}PV;{I|L}A{[SA]|[TG]}{I|L}QQPV;{I|L}TQ{I|L}A[QP]GV;{I|L}A{[SA]|[TG]}{I|L}A{[QG]|[NA]}VP;{I|L}A{[SA]|[TG]}{I|L}QQVP 7.2479;6.253;1.5011;1.135;0.94476;0.36537;0.30214;0.11188 +;-;-;-;-;-;-;- + 1221 + 1 1.828 120425.5 0.5400000214576721 3222 4448 7666 HBL1_DMSO_200M_050219_2,7672 HBL1_DMSO_200M_050219_2,7672,LPNPSSKAI True True LPNPSSKAI 41.470283 463.76866453886 9381342.0 7666.0 ENST00000395383.5_1_8:133790074-133836319:+|nuORF;;ENSG00000129292|ENST00000395386|PHF20L1;;nc|ENSG00000129292|A8MW92-4|PHF20L1;;ENST00000361997.9_1_8:133790074-133829825:+|nuORF 5.243356704711914 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7673 41.484 800.0 161330.0 25 0 10499.0 + 41177 VPDPAQKVV 9 127 476.7772771089866 951.5400012847732 2 476.7765991091728 MULTI CID FTMS 0 0 0 7666 100579.3984375 0.7599749732087716 -1 0.0306282043457031 7 Unmodified _VPDPAQKVV_ ENSG00000108219|ENST00000429989|TSPAN14;nc|ENSG00000108219|Q8NG11-2|TSPAN14;nc|ENSG00000108219|Q8NG11-3|TSPAN14 51.629811660486645 0.0367964933207742 4 VPDP[QA]KVV 9 0 + 56.833 0.0 0.0 5.9727 5.9727 90.321 0.0 0.0 0.0 35.17265551938308 12.403405327429413 12.403405327429413 35.13176327768326 0 1.6989700043360187 1.3979400086720375 0.0 0.0 + + VPDP[QA]KVV;VP[MT]V[H{I|L}]R;V[{I|L}T]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KVV;V[{I|L}T]DV[HA]VV;V[{I|L}T]DV{I|L}HGV 5.9727;2.2806;2.0895;1.8763;1.1797 +;-;-;-;- + 625 + 1 1.828 100816.3 0.550000011920929 3223 4448 7666 HBL1_DMSO_200M_050219_2,7673 HBL1_DMSO_200M_050219_2,7673,VPDPAQKVV True True VPDPAQKVV 41.4841 476.776599109173 1697759.75 7666.0 nc|ENSG00000108219|Q8NG11-2|TSPAN14;;ENSG00000108219|ENST00000429989|TSPAN14;;nc|ENSG00000108219|Q8NG11-3|TSPAN14 8.181069691975912 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7674 41.499 800.0 179800.0 25 0 11666.0 + 44781 YPLSKAQTV 9 181 503.7820742905152 1005.5495956478304 2 503.7827026247978 MULTI CID FTMS 0 0 0 7666 93627.0703125 0.0151083753353016 31 -1.4803810119628906 8 Unmodified _YPLSKAQTV_ ENSG00000144218|ENST00000672756|AFF3;nc|ENSG00000144218|P51826-2|AFF3 41.8396318013385 0.0653578398400075 4 YP{I|L}S 4 5 46.445 0.0 0.0 4.6189 0.0 0.0 0.0 542.2971895807249 542.2971895807249 27.96236705762973 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.3807196863200844 0.0 + YP{I|L}S 4.6189 + + 586 + 1 1.828 108942.7 0.4900000095367431 3224 4448 7666 HBL1_DMSO_200M_050219_2,7674 HBL1_DMSO_200M_050219_2,7674,YPLSKAQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7675 41.504 257.0 214610.0 25 0 14143.0 + -1 AGAGRMEPAL 10 111 494.74666200242825 987.4787710716564 2 494.7475158572197 MULTI CID FTMS 0 0 0 7666 84008.96875 0.8960398135182907 -1 0.0306282043457031 9 Oxidation (M) _AGAGRM(Oxidation (M))EPAL_ REV__ENSG00000168056|ENST00000301873|LTBP3;REV__nc|ENSG00000168056|Q9NS15-2|LTBP3 15.847184025352805 0.5816416552707754 4 {[C(Carbamidomethyl (C))E]|[WC]}{I|L}HPPHV 8 -1 + 21.945 0.0 0.0 2.2223 2.2223 67.06 0.0 0.0 0.0 5.484550065040278 4.175355647354181 4.175355647354181 3.699112850717935 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))E]|[WC]}{I|L}HPPHV;{[C(Carbamidomethyl (C))E]|[WC]}{I|L}H[PA]YV;{[C(Carbamidomethyl (C))E]|[WC]}{I|L}HPPVH;{[C(Carbamidomethyl (C))E]|[WC]}{I|L}H[{M(Oxidation (M))|F}V]A{I|L};{[C(Carbamidomethyl (C))E]|[WC]}{I|L}HP[HV]P;{[C(Carbamidomethyl (C))E]|[WC]}{I|L}H[{M(Oxidation (M))|F}V]{I|L}A;{[C(Carbamidomethyl (C))E]|[WC]}{I|L}H[Y{I|L}]GP 2.2223;1.8477;1.7995;1.5263;1.0829;0.49919;0.11653 -;-;-;-;-;-;- 241 + 1 1.828 46715.3 1.0 3225 4448 7666 HBL1_DMSO_200M_050219_2,7675 HBL1_DMSO_200M_050219_2,7675,AGAGRMEPAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7677 41.509 61.0 681440.0 25 0 47655.0 + 31538 RQLDTETNL 9 79 545.2804239226499 1088.5462949120997 2 545.2808715701103 MULTI CID FTMS 0 0 0 7676 645004.0 0.4618535086730807 2 -0.1676483154296875 1 Unmodified _RQLDTETNL_ ENSG00000047410|ENST00000367478|TPR 37.77132515983256 0.0876909340306915 4 DTETN{I|L} 6 3 56.235 0.0 0.0 5.1661 0.0 0.0 397.24376113105626 0.0 397.24376113105626 0.0 34.22843712902285 0.0 0.0 0 1.110924374808178 0.0 0.8494850021680094 0.0 + DTETN{I|L} 5.1661 + + 270 1 1.828 38967.1 1.0 3226 4449 7676 HBL1_DMSO_200M_050219_2,7677 HBL1_DMSO_200M_050219_2,7677,RQLDTETNL True True RQLDTETNL 41.509335 545.28087157011 18313970.0 7676.0 ENSG00000047410|ENST00000367478|TPR 7.827474753061931 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7678 41.511 98.0 472190.0 25 0 39265.0 -1 YDLELSMAL 9 80 535.7588152530392 1069.5030775728785 2 535.7592040896416 MULTI CID FTMS 0 0 0 7676 495696.03125 0.5162255805127188 3 -0.2255287170410156 2 Oxidation (M) _YDLELSM(Oxidation (M))AL_ ENSG00000155363|ENST00000369645|MOV10;ENST00000468624.5_1_1:113217534-113241292:+|nuORF;ENST00000496577.5_1_1:113231344-113241292:+|nuORF;nc|ENSG00000155363|Q9HCE1-2|MOV10 24.67388899826682 0.2172451872415813 4 EDT[WK]A{I|L} 7 -1 53.231 0.0 0.0 4.9772 0.0 0.0 208.08526248950585 0.0 208.08526248950585 0.0 31.561281911740195 0.0 0.0 0 2.1747425010840047 0.0 0.3252574989159953 0.0 EDT[WK]A{I|L} 4.9772 - 203 + 1 1.828 41878.9 1.0 3227 4449 7676 HBL1_DMSO_200M_050219_2,7678 HBL1_DMSO_200M_050219_2,7678,YDLELSMAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7679 41.513 73.0 1105800.0 25 0 69427.0 + 38880 TVKKTFFEDV 10 84 405.2193556320232 1212.6362374962696 3 405.2192870974541 MULTI CID FTMS 0 0 0 7676 876993.9375 0.0519398352210662 -4 0.1907386779785156 3 Unmodified _TVKKTFFEDV_ REV__ENSG00000079691|ENST00000329474|CARMIL1;REV__nc|ENSG00000079691|Q5VZK9-2|CARMIL1 9.38312468134398 0.6832340498775793 4 VT{I|L}Y[KA]WTV 9 -1 44.843 0.0 0.0 3.698 0.0 0.0 133.03510947398405 0.0 133.03510947398405 0.0 35.344902840322625 0.0 0.0 0 0.0 0.0 0.5 0.0 VT{I|L}Y[KA]WTV 3.698 - 117 + 1 1.828 70622.8 1.0 3228 4449 7676 HBL1_DMSO_200M_050219_2,7679 HBL1_DMSO_200M_050219_2,7679,TVKKTFFEDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7680 41.515 93.0 808640.0 25 0 53910.0 36920 TESYSVPQRGG 11 100 394.1930017849122 1179.5571759549368 3 394.1933471560478 MULTI CID FTMS 0 0 0 7676 610795.6875 0.8648585289495755 1 -0.0827407836914062 4 Unmodified _TESYSVPQRGG_ ENST00000372876.1_1_6:42712424-42712766:-|nuORF 13.534932898082838 0.7536045057035061 4 TESYSYK[R{M(Oxidation (M))|F}] 9 5 + 86.648 0.0 0.0 7.3458 7.3458 95.238 0.0 0.0 0.0 68.68948444925195 7.147642715192504 7.147642715192504 38.73835032203424 0 0.5796896906561032 1.6989700043360187 0.9247425010840048 0.0 TESYSYK[R{M(Oxidation (M))|F}];TE[HM][MT]K[R{M(Oxidation (M))|F}];TE[HM]{M(Oxidation (M))|F}{[NV]|[RG]}[R{M(Oxidation (M))|F}];TE[HM]{M(Oxidation (M))|F}[RK]MT;HE[MT][MT]K[R{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}C]|[YS]}[RK]{M(Oxidation (M))|F}[MT]{M(Oxidation (M))|F}T;HE[MT]{M(Oxidation (M))|F}{[NV]|[RG]}[R{M(Oxidation (M))|F}];HE[MT]{M(Oxidation (M))|F}[RK]MT 7.3458;4.0617;3.5513;3.401;1.3015;1.0079;0.7911;0.64078 -;-;-;-;-;-;-;- 219 + 1 1.828 66878.4 1.0 3229 4449 7676 HBL1_DMSO_200M_050219_2,7680 HBL1_DMSO_200M_050219_2,7680,TESYSVPQRGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7681 41.517 89.0 579150.0 25 0 47154.0 + 2232 AQDEPAESL 9 95 480.2194861603424 958.4244193874848 2 480.2195922732353 MULTI CID FTMS 0 0 0 7676 587925.75 0.769334233293267 6 -0.4316864013671875 5 Unmodified _AQDEPAESL_ ENSG00000141582|ENST00000269397|CBX4;nc|ENSG00000141582|O00257-3|CBX4 34.40172386719151 0.1061884637610825 4 [PA]ES{I|L} 5 4 25.489 0.0 0.0 2.6595 0.0 0.0 0.0 458.1523606318786 458.1523606318786 4.017963694660093 0.0 0.0 0.0 0 0.0 0.958607314841775 0.6861818737241735 0.0 + [PA]ES{I|L} 2.6595 + + 102 1 1.828 44057.1 1.0 3230 4449 7676 HBL1_DMSO_200M_050219_2,7681 HBL1_DMSO_200M_050219_2,7681,AQDEPAESL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7682 41.519 72.0 664980.0 25 0 58145.0 + + 21202 KQTEVETVM 9 90 532.7683823115353 1063.5222116898706 2 532.7680541872978 MULTI CID FTMS 0 0 0 7676 579616.3125 1.0 0 0.0 6 Unmodified _LPDFLETVM_ ENSG00000112578|ENST00000230340|BYSL 36.04419817259434 0.0971720506436186 4 VETVM 5 -1 48.928 0.0 0.0 4.6006 0.0 0.0 486.2456837384781 0.0 486.2456837384781 0.0 36.16369046023241 0.0 0.0 0 0.9247425010840048 0.0 0.9247425010840048 0.0 VETVM 4.6006 - 142 1 1.828 44096.8 1.0 3231 4449 7676 HBL1_DMSO_200M_050219_2,7682 HBL1_DMSO_200M_050219_2,7682,LPDFLETVM False False KQTEVETVM 41.518856 532.768054187298 3571009.25 7676.0 ENSG00000112578|ENST00000230340|BYSL 6.530251979827881 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7683 41.522 146.0 411280.0 25 0 27269.0 + + 6644 AQEVPPPTV 9 110 468.7532287631016 935.4919045930033 2 469.2537414431572 MULTI CID FTMS 0 0 0 7676 366817.3125 0.8700050963337527 -1 0.1014022827148437 7 Unmodified _EAVLFCRV_ ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY 9.347437153973935 0.7675937258251505 4 VV[HM]GPPTV 9 -1 + 18.417 0.0 0.0 1.9687 1.9687 76.511 0.0 0.0 0.0 1.7866515684025046 9.58728750249791 1.7866515684025046 15.563317301734676 0 0.0 0.0 0.2887254899964357 0.0 VV[HM]GPPTV;VV{[RE]|[WV]}{[YD]|[{M(Oxidation (M))|F}M]}GV 1.9687;0.30501 -;- 145 + 1 1.828 52204.9 1.0 3232 4449 7676 HBL1_DMSO_200M_050219_2,7683 HBL1_DMSO_200M_050219_2,7683,EAVLFCRV False False AQEVPPPTV 41.521771 469.253741443157 8693832.0 7676.0 ENSG00000131473|ENST00000352035|ACLY;;nc|ENSG00000131473|P53396-2|ACLY;;nc|ENSG00000131473|P53396-3|ACLY 5.658256848653157 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7684 41.534 702.0 202290.0 25 0 17910.0 + 35795 SVISEQSEQSV 11 134 596.7899741056209 1191.5653952780417 2 596.7888671755791 MULTI CID FTMS 0 0 0 7676 344352.625 0.5845204679268374 -1 0.1014022827148437 8 Unmodified _SVISEQSEQSV_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON 83.42873516780209 0.0051066973335107 4 [AG]ESSEQSV{I|L}W 11 7 + 65.114 0.0 0.0 5.4645 5.4645 77.855 0.0 0.0 0.0 6.082367697242127 8.604710706454433 6.082367697242127 4.432342842105896 0 0.2742275032520141 1.5228787452803376 2.1549471895720984 0.2396518287104437 [AG]ESSEQSV{I|L}W;[AG]SESEQSV{I|L}W;{[ES]|[DT]|[{I|L}C]}QSEQSV{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSEQSV{I|L}W;{[QS]|[NT]}ESEQSV{I|L}W;[AG]ESSE[AG]SV{I|L}W;{[ES]|[DT]|[{I|L}C]}QSE[AG]SV{I|L}W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSE[AG]SV{I|L}W;[AG]SESE[AG]SV{I|L}W;{[QS]|[NT]}ESE[AG]SV{I|L}W 5.4645;5.0926;4.9541;4.9541;4.8551;4.4973;4.185;4.185;4.1254;4.086 -;-;-;-;-;-;-;-;-;- 2817 1 1.828 108402.8 1.0 3233 4449 7676 HBL1_DMSO_200M_050219_2,7684 HBL1_DMSO_200M_050219_2,7684,SVISEQSEQSV True True SVISEQSEQSV 41.533977 596.788867175579 4246248.0 7676.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-8|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-9|SON 6.554585297902425 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7685 41.547 748.0 388710.0 25 0 53400.0 -1 ECKECRKCFY 10 158 711.7990622814344 1421.5835716296688 2 711.7995483279228 MULTI CID FTMS 0 0 0 7676 332542.125 0.1386259180328535 -3 0.1377410888671875 9 2 Carbamidomethyl (C) _ECKEC(Carbamidomethyl (C))RKC(Carbamidomethyl (C))FY_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 27.628801355627647 0.3479284626772844 4 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y 13 -1 + 145.46 0.0 0.0 10.232 10.232 81.761 0.0 0.0 0.0 9.45886570567589 16.642078980768076 9.45886570567589 0.7878248729527684 0 1.66944517631652 1.3010299956639813 2.2510912013506124 2.8288245576287263 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGADAGA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGADQA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQDAGA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGA[AG]DA{M(Oxidation (M))|F}Y;[QA]DHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEQAQDA{M(Oxidation (M))|F}Y;[QA]DHEAGADAGA{M(Oxidation (M))|F}Y;{[DA]|[EG]}EHQAGAQDA{M(Oxidation (M))|F}Y 10.232;10.177;9.7838;9.7356;9.7266;9.594;9.5668;9.5362;9.5114;9.4871 -;-;-;-;-;-;-;-;-;- 193216 1 1.828 206536.5 1.0 3234 4449 7676 HBL1_DMSO_200M_050219_2,7685 HBL1_DMSO_200M_050219_2,7685,ECKECRKCFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7686 41.551 202.0 386660.0 25 0 39371.0 + 21879 LPPESTQV 8 105 435.7319671401997 869.4493813471995 2 435.7318603396416 MULTI CID FTMS 0 0 0 7676 295003.53125 0.9081007290980369 -7 0.2355613708496093 10 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 34.18733598223924 0.3315367612694167 4 [{I|L}P][EP]STQV 8 0 + 27.101 0.0 0.0 3.117 3.117 72.343 0.0 0.0 0.0 6.94537812595911 8.667053245199622 6.94537812595911 6.94537812595911 0 0.3182503180159344 1.5228787452803376 0.805462187404089 0.0 + + [{I|L}P][EP]STQV;[EP]PS{I|L}TQV;[EP]PST{I|L}QV;[EP]P{I|L}STQV;[EP]SP{I|L}TQV;[EP]SPT{I|L}QV;[EP]PSTQ{I|L}V;[EP]SPTQ{I|L}V;[EP]PST[AG]{I|L}V;[EP]SPT[AG]{I|L}V 3.117;2.3182;2.3137;2.0783;1.8605;1.856;1.6732;1.2156;0.60796;0.15027 +;-;-;-;-;-;-;-;-;- + 292 1 1.828 65624.2 1.0 3235 4449 7676 HBL1_DMSO_200M_050219_2,7686 HBL1_DMSO_200M_050219_2,7686,LPPESTQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7687 41.558 422.0 183490.0 25 0 18447.0 11276 GEVCCWLCI 9 114 513.2171555276142 1024.4197581220285 2 513.2172119021416 MULTI CID FTMS 0 0 0 7676 199558.640625 0.0075689237439392 28 -1.2651710510253906 11 Unmodified _GEVCCWLCI_ ENSG00000164082|ENST00000395052|GRM2;ENST00000296479.9_1_3:51747995-51752125:+|nuORF 12.531546534597751 0.4974689918368763 4 {[DA]|[EG]}VAR 5 6 30.417 0.0 0.0 2.9692 0.0 0.0 0.0 509.12981606564085 509.12981606564085 12.739699466309492 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.2396518287104437 0.0 {[DA]|[EG]}VAR 2.9692 - 218 1 1.828 61972.8 1.0 3236 4449 7676 HBL1_DMSO_200M_050219_2,7687 HBL1_DMSO_200M_050219_2,7687,GEVCCWLCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7688 41.566 405.0 295550.0 25 0 28008.0 + 13974 HYVDSTTMY 9 129 558.7370745949318 1115.4595962566634 2 558.7366210818291 MULTI CID FTMS 0 0 0 7676 203654.203125 0.3956515953079146 -2 0.1320304870605468 12 Unmodified _HYVDSTTMY_ ENSG00000106392|ENST00000436587|C1GALT1 74.42276476219924 0.019389277360085 4 {[WN]|[YH]}VDSTTMY 9 0 + 79.548 0.0 0.0 7.1314 7.1314 92.963 0.0 0.0 0.0 16.970355045588192 14.09256854528806 14.09256854528806 16.970355045588192 0 0.9247425010840048 1.5228787452803376 1.6989700043360187 0.0 + + {[WN]|[YH]}VDSTTMY;[VG]GWDSTTMY;{[WN]|[YH]}T{[CP]|[EA]}TTMY;{[NV]|[RG]}WDSTTMY;{[WN]|[YH]}V{[CA]|SS}ETMY;{[WN]|[YH]}T[HQ]HMY;{[WN]|[YH]}V{[CA]|SS}MVMY;[QA][WE]STTMY;[QA]{I|L}{[C(Carbamidomethyl (C))E]|[WC]}TTMY;[QA]MTT[DG]VMY 7.1314;5.61;5.3589;5.0085;4.7433;4.4688;4.4036;4.3528;4.1744;4.122 +;-;-;-;-;-;-;-;-;- + 2244 1 1.828 95918.5 1.0 3237 4449 7676 HBL1_DMSO_200M_050219_2,7688 HBL1_DMSO_200M_050219_2,7688,HYVDSTTMY True True HYVDSTTMY 41.56557 558.736621081829 3124221.25 7676.0 ENSG00000106392|ENST00000436587|C1GALT1 7.930847803751628 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7689 41.571 229.0 862150.0 25 0 150660.0 + 15366 IPNEKIRNI 9 131 366.2207244973479 1095.6403440922436 3 366.2190124392509 MULTI CID FTMS 0 0 0 7676 174662.671875 0.0542392126258111 -4 0.1907386779785156 13 Unmodified _IPNEKIRNI_ ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1 43.77239144664712 0.0547478964384323 4 {I|L}PNEK{I|L}RN{I|L} 9 0 + 73.98 0.0 0.0 6.7522 6.7522 77.848 0.0 0.0 0.0 27.44727494896693 1.6633142176652456 1.6633142176652456 1.6633142176652456 0 0.566901560044258 1.0969100130080565 0.3807196863200844 0.9489700043360187 + + {I|L}PNEK{I|L}RN{I|L};{I|L}PNEK{I|L}RQV;{I|L}PNEK{I|L}{I|L}[RN];{I|L}PN{I|L}[SG]{I|L}RN{I|L};{I|L}PGGEK{I|L}RN{I|L};{I|L}PN{I|L}EKRN{I|L};{I|L}PNE{I|L}KRN{I|L};{I|L}PN{I|L}[SG]{I|L}RQV;{I|L}PGGEK{I|L}RQV;{I|L}PN{I|L}[SG]{I|L}{I|L}[RN] 6.7522;6.6004;6.5503;5.956;5.9118;5.8995;5.8552;5.8042;5.76;5.7541 +;-;-;-;-;-;-;-;-;- + 1182 + 1 1.828 166666.3 1.0 3238 4449 7676 HBL1_DMSO_200M_050219_2,7689 HBL1_DMSO_200M_050219_2,7689,IPNEKIRNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7690 41.575 215.0 341490.0 25 0 40929.0 + 2327 AQITGTEHL 9 98 485.25360254359225 968.4926521539844 2 485.2532836794853 MULTI CID FTMS 0 0 0 7676 154992.609375 0.3958346235816313 -2 0.1320304870605468 14 Unmodified _AQITGTEHL_ ENSG00000163110|ENST00000317968|PDLIM5;nc|ENSG00000163110|Q96HC4-2|PDLIM5;nc|ENSG00000163110|Q96HC4-3|PDLIM5;nc|ENSG00000163110|Q96HC4-4|PDLIM5;nc|ENSG00000163110|Q96HC4-6|PDLIM5;nc|ENSG00000163110|Q96HC4-7|PDLIM5 57.47134341890925 0.0274820932774257 4 [QA]{I|L}TASEH{I|L} 9 2 + 66.266 0.0 0.0 6.8422 6.8422 92.918 0.0 0.0 0.0 52.28665815228513 8.738221912761503 8.738221912761503 23.499934467764863 0 1.305462187404089 0.6777807052660807 1.1989700043360187 0.0 [QA]{I|L}TASEH{I|L};[QA]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EH{I|L};[QA]{I|L}[DG]A[VP][QA];[QA]{I|L}YY{I|L}[QA];[QA][TP]SA[VP][QA];[QA]{I|L}[DG][PG]{I|L}[QA];[QA][TP]S[PG]{I|L}[QA];[QA]YY{I|L}{I|L}[QA];{[DA]|[EG]}[HT]{I|L}T{I|L}[QA];[QA][HM][RK][QA] 6.8422;4.4157;3.4303;3.269;2.914;2.7586;2.2423;2.191;0.77575;0.71662 -;-;-;-;-;-;-;-;-;- 205 + 1 1.828 60510.7 1.0 3239 4449 7676 HBL1_DMSO_200M_050219_2,7690 HBL1_DMSO_200M_050219_2,7690,AQITGTEHL True True AQITGTEHL 41.575101 485.253283679485 2288419.0 7676.0 nc|ENSG00000163110|Q96HC4-3|PDLIM5;;nc|ENSG00000163110|Q96HC4-4|PDLIM5;;ENSG00000163110|ENST00000317968|PDLIM5;;nc|ENSG00000163110|Q96HC4-2|PDLIM5;;nc|ENSG00000163110|Q96HC4-6|PDLIM5;;nc|ENSG00000163110|Q96HC4-7|PDLIM5 7.495704015096028 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7691 41.579 193.0 684530.0 25 0 250640.0 + 5814 DPRHGRYLTV 10 68 607.3254071765065 1212.6362614198129 2 607.3245727419853 MULTI CID FTMS 0 0 0 7676 119707.4140625 0.0449129191917676 -4 0.1907386779785156 15 Unmodified _DPRHGRYLTV_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000454403.1_1_13:41958968-41959286:-|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3 11.494710602746466 0.654671931888957 4 DV[PG]H 5 8 22.218 0.0 0.0 1.8322 0.0 0.0 0.0 704.3720797174436 704.3720797174436 6.020599913279625 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV[PG]H 1.8322 - 27 + 1 1.828 98643.4 1.0 3240 4449 7676 HBL1_DMSO_200M_050219_2,7691 HBL1_DMSO_200M_050219_2,7691,DPRHGRYLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7692 41.587 462.0 226830.0 25 0 15711.0 -1 SSHCAPFSV 9 147 496.2202061655906 990.4258593979812 2 496.2200500369072 MULTI CID FTMS 0 0 0 7676 110654.0 0.3631058497121397 -3 0.1377410888671875 16 Carbamidomethyl (C) _SSHC(Carbamidomethyl (C))APFSV_ ENST00000481500.1_1_2:242277175-242285749:+|nuORF 34.10243960390752 0.1078313939113124 4 V[DP]{[DS]|[MA]|[CV]|TT}WSSV 9 -1 + 42.418 0.0 0.0 4.2828 4.2828 81.386 0.0 0.0 0.0 31.380259698573028 3.1909945086313485 3.1909945086313485 14.28666248215634 0 1.774227503252014 0.0 0.805462187404089 0.0 V[DP]{[DS]|[MA]|[CV]|TT}WSSV;E{[ES]|[DT]|[{I|L}C]}[PA]WSSV;[TA][WH]{[CT]|[{M(Oxidation (M))|F}G]}SSV;E{[{M(Oxidation (M))|F}D]|MM}[YR]YV;V[DP]{[DS]|[MA]|[CV]|TT}WTTA;{[HG]|PP}C(Carbamidomethyl (C))[VP]C(Carbamidomethyl (C))YV;{[QS]|[NT]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][HV]DV;{[HG]|PP}C(Carbamidomethyl (C))AA[YV]DV 4.2828;2.8403;2.0437;1.0755;0.99044;0.42981;0.12848;0.12178 -;-;-;-;-;-;-;- 528 + 1 1.828 83561.0 1.0 3241 4449 7676 HBL1_DMSO_200M_050219_2,7692 HBL1_DMSO_200M_050219_2,7692,SSHCAPFSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7694 41.591 3.6 14166000.0 25 0 1424400.0 + 24980 MPPPPPQGV 9 72 460.23852327962805 918.462493626056 2 460.2391235232353 MULTI CID FTMS 0 0 0 7693 15817997.0 0.8535483345983492 -8 0.3183021545410156 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 74.39630413441286 0.0193995060682538 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 49.742 0.0 0.0 5.4158 5.4158 74.198 0.0 0.0 0.0 2.5096284014659886 2.5096284014659886 2.5096284014659886 2.5096284014659886 0 2.0356668758921828 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;{[RE]|[WV]}HPPQGV;[VG]EPHPQR;[RH]EPPQGV;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQGV;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;[VG]EP{[QD]|[EN]|[WG]|[KD]|[RS]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.4158;5.1426;4.0567;3.3882;3.3763;2.6736;2.1751;2.1751;0.17597 -;+;-;-;-;-;-;-;- + 203 1 1.828 44736.7 1.0 3242 4450 7693 HBL1_DMSO_200M_050219_2,7694 HBL1_DMSO_200M_050219_2,7694,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7695 41.593 49.0 1322600.0 25 0 152250.0 + 5688 DPHSFPRTV 9 87 352.5139443299147 1054.520003589944 3 352.5136291384697 MULTI CID FTMS 0 0 0 7693 1006001.5625 0.4227360466067869 11 -0.7004852294921875 2 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 36.506200033944 0.094635877243972 4 [WY]S{M(Oxidation (M))|F}P 5 6 36.4 0.0 0.0 3.4518 0.0 0.0 0.0 371.2048682350655 371.2048682350655 20.457574905606748 0.0 0.0 0.0 0 0.6109243748081782 1.0457574905606752 0.0 0.0 [WY]S{M(Oxidation (M))|F}P 3.4518 - 79 + 1 1.828 60206.6 1.0 3243 4450 7693 HBL1_DMSO_200M_050219_2,7695 HBL1_DMSO_200M_050219_2,7695,DPHSFPRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7696 41.594 44.0 1795900.0 25 0 484580.0 -1 ILMEHIHKL 9 86 383.8864846790674 1148.6376246374025 3 383.8864929080009 MULTI CID FTMS 0 0 0 7693 995813.4375 1.0 0 0.0 3 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 20.580933911654288 0.2795815587326093 4 {I|L}{I|L}{M(Oxidation (M))|F}E[H{I|L}]H{I|L}K 9 -1 + 59.607 0.0 0.0 5.1894 5.1894 77.367 0.0 0.0 0.0 33.46787486224656 4.913616938342727 4.913616938342727 4.913616938342727 0 0.2742275032520141 1.6989700043360187 0.3807196863200844 0.3494850021680094 {I|L}{I|L}{M(Oxidation (M))|F}E[H{I|L}]H{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}E[H{I|L}]HK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}E[H{I|L}]{I|L}HK;{I|L}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}HHK 5.1894;4.7616;4.6652;4.5809 -;+;-;- + 198 + 1 1.828 64951.6 1.0 3244 4450 7693 HBL1_DMSO_200M_050219_2,7696 HBL1_DMSO_200M_050219_2,7696,ILMEHIHKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7697 41.595 48.0 1009800.0 25 0 114220.0 + 10561 FVHPGAATV 9 70 449.74240965700255 897.4702663808051 2 449.7411071658134 MULTI CID FTMS 0 0 0 7693 874056.75 1.0 0 0.0 4 Unmodified _FVHPGAATV_ ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 26.34127834903884 0.1960301806784604 4 [VS][NP]VH{M(Oxidation (M))|F}V 8 6 + 34.587 0.0 0.0 3.8539 3.8539 78.613 0.0 0.0 0.0 10.496812376923046 9.731975075880328 9.731975075880328 10.496812376923046 0 0.6989700043360187 2.0 0.3494850021680094 0.0 [VS][NP]VH{M(Oxidation (M))|F}V;[VS][MT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SV;[VS][RH][PG]{M(Oxidation (M))|F}V;[VS][NP]V{[QS]|[NT]}[PA];[VS][NP][WK][PA];[VS][RH][MT][PA];{[TV]|[{I|L}S]}A[QP]H{M(Oxidation (M))|F}V 3.8539;2.6843;2.4384;1.7076;1.5174;1.3242;1.1491 -;-;-;-;-;-;- 169 1 1.828 44359.5 1.0 3245 4450 7693 HBL1_DMSO_200M_050219_2,7697 HBL1_DMSO_200M_050219_2,7697,FVHPGAATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7698 41.598 125.0 486360.0 25 0 49535.0 + 2133 APVPAPERK 9 79 482.78254305279614 963.5505331723924 2 482.7826721072197 MULTI CID FTMS 0 0 0 7693 447033.1875 0.344524058874174 15 -0.8190231323242188 5 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 22.736283301280096 0.2418982879461534 4 APAPVP 6 -1 68.889 0.0 0.0 7.1495 0.0 0.0 0.0 428.2252291315063 428.2252291315063 46.83729411347621 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 APAPVP 7.1495 - 132 + 1 1.828 51735.9 1.0 3246 4450 7693 HBL1_DMSO_200M_050219_2,7698 HBL1_DMSO_200M_050219_2,7698,APVPAPERK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7699 41.601 152.0 651540.0 25 0 125630.0 + 10722 FYDDKKYTY 9 81 414.86072042111215 1241.5603318635365 3 414.8607971072197 MULTI CID FTMS 0 0 0 7693 326637.53125 0.1942073182061075 -3 0.2147712707519531 6 Unmodified _FYDDKKYTY_ ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 43.77239144664712 0.0547478964384323 4 {M(Oxidation (M))|F}YDDKS 6 4 67.0 0.0 0.0 5.3964 0.0 0.0 0.0 483.2231539361938 483.2231539361938 46.831436695420976 0.0 0.0 0.0 0 0.5752574989159953 1.5228787452803376 0.4247425010840047 0.0 {M(Oxidation (M))|F}YDDKS 5.3964 - 315 + 1 1.828 84699.3 1.0 3247 4450 7693 HBL1_DMSO_200M_050219_2,7699 HBL1_DMSO_200M_050219_2,7699,FYDDKKYTY True True FYDDKKYTY 41.600864 414.86079710722 43485678.0 7693.0 ENSG00000115368|ENST00000314761|WDR75;;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 7.946776231129964 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7700 41.613 725.0 357410.0 25 0 35749.0 + 10724 FYDDKKYTY 9 154 621.7873831838443 1241.5602134344886 2 621.7874023318291 MULTI CID FTMS 0 0 0 7693 311581.9375 0.2198612028061095 -2 0.18414306640625 7 Unmodified _FYDDKKYTY_ ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 100.7086487251713 0.0106210784076588 4 {M(Oxidation (M))|F}YDDKSKD[QP] 10 4 + 94.835 0.0 0.0 7.6384 7.6384 83.639 0.0 0.0 0.0 26.398707089686653 0.6774187340745641 0.6774187340745641 3.194987059555146 0 1.4308845489566888 1.6989700043360187 1.6861818737241734 0.0 {M(Oxidation (M))|F}YDDKSKD[QP];{M(Oxidation (M))|F}YDDKYKTY;{M(Oxidation (M))|F}YDDKSDK[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}DKSKDDEY;{M(Oxidation (M))|F}YDDYKKTY;{[QD]|[EN]|[WG]|[KD]|[RS]}KDSKDDEY;[Y{M(Oxidation (M))|F}]DDKKYTY;{[QD]|[EN]|[WG]|[KD]|[RS]}DKYTY{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}DKYY{M(Oxidation (M))|F}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}DKYYT{M(Oxidation (M))|F}Y 7.6384;7.3811;7.134;6.7106;6.415;6.2062;5.7201;5.1728;5.0859;4.8856 -;-;-;-;-;-;+;-;-;- + 4842 + 1 1.828 190012.1 1.0 3248 4450 7693 HBL1_DMSO_200M_050219_2,7700 HBL1_DMSO_200M_050219_2,7700,FYDDKKYTY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7701 41.627 766.0 216850.0 25 0 20210.0 + -1 FSHMLAGSEC 10 155 577.7334249847149 1153.4522970362298 2 577.7341186404228 MULTI CID FTMS 0 0 0 7693 290596.46875 0.6276488792633945 1 -0.0849075317382812 8 Carbamidomethyl (C),Oxidation (M) _FSHM(Oxidation (M))LAGSEC(Carbamidomethyl (C))_ REV__ENSG00000213533|ENST00000355083|STIMATE 13.90604991867851 0.6142120002215601 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HNSVEC[MT] 10 -1 + 58.48 0.0 0.0 5.07 5.07 73.021 0.0 0.0 0.0 2.7422750325201406 2.7422750325201406 2.7422750325201406 2.7422750325201406 0 0.4247425010840047 1.0969100130080565 1.0044321917401078 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HNSVEC[MT];{[{M(Oxidation (M))|F}C]|[YS]}CEVSNHC{I|L};{[{M(Oxidation (M))|F}C]|[YS]}CEVSNH{I|L}C;{[WN]|[YH]}ANSVEC[MT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HGGSVEC[MT];{[{M(Oxidation (M))|F}C]|[YS]}CEVSN{[ES]|[DT]|[{I|L}C]}H;{[{M(Oxidation (M))|F}C]|[YS]}CEVSGGHC{I|L};[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}NSVEC[MT];{[{M(Oxidation (M))|F}C]|[YS]}CA[Y{M(Oxidation (M))|F}]C(Carbamidomethyl (C)){I|L}Q;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AC[MT] 5.07;4.8322;4.2522;4.0012;3.9072;3.6726;3.6695;3.4763;3.3439;3.3333 -;-;-;-;-;-;-;-;-;- 1408 1 1.828 126144.4 1.0 3249 4450 7693 HBL1_DMSO_200M_050219_2,7701 HBL1_DMSO_200M_050219_2,7701,FSHMLAGSEC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7702 41.64 782.0 515580.0 25 0 78703.0 + 15369 IPNEKIRNI 9 177 548.8271833472782 1095.6398137613562 2 548.8273193240166 MULTI CID FTMS 0 0 0 7693 267686.5 0.326886329300092 -3 0.2147712707519531 9 Unmodified _IPNEKIRNI_ ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1 61.60191391372663 0.0251951588191061 4 {I|L}PNEK{I|L}RQV 9 2 + 92.257 0.0 0.0 8.4204 8.4204 80.052 0.0 0.0 0.0 36.47817481888637 0.621479067488437 0.621479067488437 0.621479067488437 0 1.372363747448347 2.0 0.2614393726401688 0.9604093769761876 {I|L}PNEK{I|L}RQV;{I|L}PNEK{I|L}RVQ;{I|L}PNEK{I|L}RN{I|L};{I|L}PGGEK{I|L}RQV;{I|L}PGGEK{I|L}RVQ;{I|L}PNEK{I|L}R[AG]V;{I|L}PGGEK{I|L}RN{I|L};{I|L}PN{I|L}[SG]{I|L}RQV;{I|L}PN{I|L}[SG]{I|L}RVQ;{I|L}PNEK{I|L}RGG{I|L} 8.4204;8.3636;8.0511;7.5799;7.5232;7.41;7.2107;7.2027;7.146;7.0407 -;-;+;-;-;-;-;-;-;- + 1889 + 1 1.828 311270.1 1.0 3250 4450 7693 HBL1_DMSO_200M_050219_2,7702 HBL1_DMSO_200M_050219_2,7702,IPNEKIRNI True True IPNEKIRNI 41.640237 548.827319324017 128544540.0 7693.0 ENSG00000168827|ENST00000486715|GFM1;;nc|ENSG00000168827|Q96RP9-2|GFM1 6.228493372599284 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7703 41.643 146.0 588070.0 25 0 29771.0 + 18468 KYIHSANVL 9 107 522.7948666455446 1043.5751803578892 2 522.7927734255791 MULTI CID FTMS 0 0 0 7693 279845.03125 0.1754579892994432 -3 0.2147712707519531 10 Unmodified _KYIHSANVL_ ENSG00000069956|ENST00000261845|MAPK6;ENSG00000100030|ENST00000215832|MAPK1;ENSG00000102882|ENST00000263025|MAPK3;ENSG00000141639|ENST00000400384|MAPK4;ENST00000478356.5_2_16:30128576-30134273:-|nuORF;ENST00000483869.1_1_16:30129346-30134419:-|nuORF;nc|ENSG00000100030|P28482-2|MAPK1;nc|ENSG00000102882|P27361-2|MAPK3;nc|ENSG00000102882|P27361-3|MAPK3 66.45667989310934 0.0225072657982126 4 [VS]Q{[QV]|[N{I|L}]|[RA]|[KV]}SANV{I|L} 10 4 + 51.23 0.0 0.0 4.9091 4.9091 68.799 0.0 0.0 0.0 0.791812460476244 15.026975159433531 0.791812460476244 0.791812460476244 0 0.8494850021680094 0.6989700043360187 0.9436726795685342 0.4247425010840047 [VS]Q{[QV]|[N{I|L}]|[RA]|[KV]}SANV{I|L};[YK]{I|L}HSANV{I|L};[KG]E{[QV]|[N{I|L}]|[RA]|[KV]}SANV{I|L};[H{I|L}]YKSANV{I|L};{[QG]|[NA]}S[R{I|L}]SANV{I|L};[VS]Q[WK]ANV{I|L};{[SA]|[TG]}R{[QV]|[N{I|L}]|[RA]|[KV]}SANV{I|L};{[SA]|[TG]}N[R{I|L}]SANV{I|L};[WK]{[QV]|[N{I|L}]|[RA]|[KV]}SANV{I|L};[KG]E[WK]ANV{I|L} 4.9091;4.8332;4.6965;4.581;4.2883;4.2789;4.2393;4.2393;4.2351;4.0663 -;+;-;-;-;-;-;-;-;- + 1232 1 1.828 75771.7 1.0 3251 4450 7693 HBL1_DMSO_200M_050219_2,7703 HBL1_DMSO_200M_050219_2,7703,KYIHSANVL True True KYIHSANVL 41.643164 522.792773425579 10879788.0 7693.0 ENST00000483869.1_1_16:30129346-30134419:-|nuORF;;nc|ENSG00000102882|P27361-3|MAPK3;;ENSG00000141639|ENST00000400384|MAPK4;;nc|ENSG00000100030|P28482-2|MAPK1;;ENSG00000102882|ENST00000263025|MAPK3;;ENSG00000100030|ENST00000215832|MAPK1;;nc|ENSG00000102882|P27361-2|MAPK3;;ENST00000478356.5_2_16:30128576-30134273:-|nuORF;;ENSG00000069956|ENST00000261845|MAPK6 5.64812692006429 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7704 41.657 800.0 185430.0 25 0 37779.0 8258 EQHQGQEEGYF 11 128 676.2806739458304 1350.5467949584606 2 676.2820312380791 MULTI CID FTMS 0 0 0 7693 165232.890625 1.0 0 0.0 11 Unmodified _EQHQGQEEGYF_ ENSG00000197808|ENST00000588268|ZNF461;nc|ENSG00000197808|Q8TAF7-2|ZNF461 32.78568957990786 0.3235288296534633 4 {[DA]|[EG]}QEHQQW{M(Oxidation (M))|F}Y 10 7 + 69.783 0.0 0.0 5.167 5.167 77.609 0.0 0.0 0.0 6.709412807357751 11.17620096875696 6.709412807357751 5.330119266223079 0 0.8935078169319297 1.0969100130080565 1.392159058960253 1.9124379954164592 {[DA]|[EG]}QEHQQW{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAEHQQW{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AEHQQW{M(Oxidation (M))|F}Y;[AG]DAEHQQW{M(Oxidation (M))|F}Y;{[DA]|[EG]}QEHQQ{[DA]|[EG]}{M(Oxidation (M))|F}Y;{[DA]|[EG]}QEHQ[AG]W{M(Oxidation (M))|F}Y;{[DA]|[EG]}QEH[AG]QW{M(Oxidation (M))|F}Y;[QA]DEHQQW{M(Oxidation (M))|F}Y;[AG][NS]NHQQW{M(Oxidation (M))|F}Y;[AG]ADEHQQW{M(Oxidation (M))|F}Y 5.167;4.7723;4.6702;4.5783;4.4884;4.4884;4.4884;4.2831;4.211;4.1912 -;-;-;-;-;-;-;-;-;- 4487 1 1.828 107632.8 0.7599999904632568 3252 4450 7693 HBL1_DMSO_200M_050219_2,7704 HBL1_DMSO_200M_050219_2,7704,EQHQGQEEGYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7705 41.672 800.0 148310.0 25 0 7155.2 + 14926 ILMEHIHKL 9 153 575.3252395244591 1148.635926115718 2 575.3263427615166 MULTI CID FTMS 0 0 0 7693 96914.5625 0.9495097630991104 1 -0.0849075317382812 12 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 79.59630418116434 0.0176145593575188 4 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}H{I|L}K 9 2 + 90.563 0.0 0.0 7.8844 7.8844 94.371 0.0 0.0 0.0 70.71900508346326 12.06228073223494 12.06228073223494 14.4703848962221 0 1.837180496500464 2.0 1.174742501084005 0.2396518287104437 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}H{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}SNP{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}SGGP{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}SNPRR{M(Oxidation (M))|F};{I|L}{I|L}{M(Oxidation (M))|F}SGGPRR{M(Oxidation (M))|F};{I|L}YPEH{I|L}H{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}EHVV[VP]P;{I|L}{I|L}{M(Oxidation (M))|F}SMK[WP]K;{I|L}{I|L}{M(Oxidation (M))|F}SMK[WK]P 7.8844;6.6246;5.8268;5.8197;5.018;4.8607;4.8555;4.7021;4.6287;4.4355 -;-;-;-;-;-;+;-;-;- + 1732 + 1 1.828 90465.4 0.6399999856948853 3253 4450 7693 HBL1_DMSO_200M_050219_2,7705 HBL1_DMSO_200M_050219_2,7705,ILMEHIHKL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7707 41.676 22.0 2025500.0 25 0 291910.0 34925 SQIQEFKEA 9 74 540.2721145298868 1078.5296761265736 2 540.2723876833916 MULTI CID FTMS 0 0 0 7706 2267874.5 0.876316092495877 1 -0.0578804016113281 1 Unmodified _SQIQEFKEA_ ENSG00000101335|ENST00000279022|MYL9;ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B;ENST00000577510.5_1_18:3252320-3253446:+|nuORF;ENST00000580353.1_1_18:3247898-3253446:+|nuORF;nc|ENSG00000101335|P24844-2|MYL9 37.07464296494664 0.0915153923251136 4 {[QS]|[NT]}{I|L}QE{M(Oxidation (M))|F} 6 3 60.323 0.0 0.0 5.593 0.0 0.0 0.0 343.16367517642817 343.16367517642817 36.957640437841874 0.0 0.0 0.0 0 1.2302046884880935 1.0 0.7614393726401688 0.5 + {[QS]|[NT]}{I|L}QE{M(Oxidation (M))|F} 5.593 + + 546 + 1 1.823 36775.7 1.0 3254 4451 7706 HBL1_DMSO_200M_050219_2,7707 HBL1_DMSO_200M_050219_2,7707,SQIQEFKEA True True MFEQAQIQEFKEA 41.676388 540.272387683392 0.0 7706.0 ENSG00000106631|ENST00000223364|MYL7 0.1451079050699869 3.0 False 13.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7708 41.678 77.0 749770.0 25 0 52323.0 + 22067 LPPPPQQKI 9 89 509.3084386644216 1016.6023243956432 2 509.3084594607353 MULTI CID FTMS 0 0 0 7706 758754.6875 0.1759197415624544 17 -0.7677268981933594 2 Unmodified _LPPPPQQKI_ ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 20.453626601364224 0.2830276176381075 4 {I|L}PPP 4 5 56.186 0.0 0.0 5.5268 0.0 0.0 0.0 609.3366182916624 609.3366182916624 43.11288366702229 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPP 5.5268 + + 113 + 1 1.823 55138.6 1.0 3255 4451 7706 HBL1_DMSO_200M_050219_2,7708 HBL1_DMSO_200M_050219_2,7708,LPPPPQQKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7709 41.679 29.0 2345800.0 25 0 307530.0 + 21090 LPAGPAPKV 9 72 425.2631464009008 848.5117398686017 2 425.2632934451103 MULTI CID FTMS 0 0 0 7706 1519735.375 1.0 0 0.0 3 Unmodified _LPAGPAPKV_ ENSG00000254505|ENST00000347519|CHMP4A;nc|ENSG00000254505|Q9BY43-2|CHMP4A 42.09456458481378 0.0639583784996157 4 {I|L}PA[QP]PKV 8 2 + 54.115 0.0 0.0 6.3776 6.3776 92.363 0.0 0.0 0.0 39.74379329866573 6.182730646235811 6.182730646235811 54.11455566024303 0 1.1505149978319906 1.5228787452803376 0.0 0.0 {I|L}PA[QP]PKV 6.3776 - 119 + 1 1.823 56473.4 1.0 3256 4451 7706 HBL1_DMSO_200M_050219_2,7709 HBL1_DMSO_200M_050219_2,7709,LPAGPAPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7710 41.683 215.0 563620.0 25 0 76276.0 + 28013 PMPPRTNE 8 98 471.2300881821903 940.4456234311806 2 471.2300292849541 MULTI CID FTMS 0 0 0 7706 641258.25 0.8475925171265596 -10 0.4232826232910156 4 Unmodified _PMPPRTNE_ REV__ENSG00000101203|ENST00000358894|COL20A1;REV__ENST00000471582.5_1_20:61956720-61961007:+|nuORF;REV__ENST00000479501.5_1_20:61950534-61961007:+|nuORF;REV__nc|ENSG00000101203|Q9P218-2|COL20A1;REV__nc|ENSG00000101203|Q9P218-3|COL20A1 15.847184025352805 0.6768015514314958 4 MPPP 4 -1 57.691 0.0 0.0 6.1344 0.0 0.0 0.0 515.2235989334565 515.2235989334565 46.096981436199016 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 MPPP 6.1344 - 129 + 1 1.823 97003.8 1.0 3257 4451 7706 HBL1_DMSO_200M_050219_2,7710 HBL1_DMSO_200M_050219_2,7710,PMPPRTNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7711 41.688 243.0 324760.0 25 0 59101.0 25558 NEVDGQDYHF 10 86 612.2519445370135 1222.489336140827 2 612.2526733279228 MULTI CID FTMS 0 0 0 7706 354784.09375 0.7083521239911382 1 -0.0578804016113281 5 Unmodified _NEVDGQDYHF_ ENSG00000082458|ENST00000374360|DLG3;nc|ENSG00000082458|Q92796-2|DLG3;nc|ENSG00000082458|Q92796-3|DLG3 16.149105407346934 0.5765757077271437 4 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 8 + 108.81 0.0 0.0 8.9003 8.9003 92.544 0.0 0.0 0.0 7.269987279362624 90.13296575220323 7.269987279362624 9.164539485499262 0 1.424742501084005 0.0 1.8098943791441968 1.2302046884880935 [HD]EAQQDA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQDA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]DA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[AG]DA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[AG]QDA{M(Oxidation (M))|F}Y;[AG]DA[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}NA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}A[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}NA{M(Oxidation (M))|F}Y;{[SA]|[TG]}[{M(Oxidation (M))|F}E]Q{M(Oxidation (M))|F}NA{M(Oxidation (M))|F}Y 8.9003;8.1506;8.1506;6.4441;6.3976;5.6944;5.6944;3.9789;3.4481;3.2163 -;-;-;-;-;-;-;-;-;- 756 1 1.823 62310.5 1.0 3258 4451 7706 HBL1_DMSO_200M_050219_2,7711 HBL1_DMSO_200M_050219_2,7711,NEVDGQDYHF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7712 41.691 134.0 428460.0 25 0 102380.0 + 56 AADGKGVVVV 10 77 457.7693259969946 913.5240990607892 2 457.7692443728447 MULTI CID FTMS 0 0 0 7706 348650.59375 0.81899504733761 -1 0.0849075317382812 6 Unmodified _AADGKGVVVV_ ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28;nc|ENSG00000108107|P46779-4|RPL28;nc|ENSG00000108107|P46779-5|RPL28 20.41453444215458 0.5050059513928961 4 VGVVV 5 6 23.5 0.0 0.0 2.5724 0.0 0.0 442.216600486525 0.0 442.216600486525 0.0 8.015384402724592 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 VGVVV 2.5724 - 161 1 1.823 52383.8 1.0 3259 4451 7706 HBL1_DMSO_200M_050219_2,7712 HBL1_DMSO_200M_050219_2,7712,AADGKGVVVV False True AADGKGVVVV 41.690695 457.769244372845 2903393.25 7706.0 nc|ENSG00000108107|P46779-3|RPL28;;ENSG00000108107|ENST00000344063|RPL28;;nc|ENSG00000108107|P46779-4|RPL28;;nc|ENSG00000108107|P46779-2|RPL28;;nc|ENSG00000108107|P46779-5|RPL28 2.5924947261810303 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7713 41.695 253.0 349380.0 25 0 25200.0 + 5685 DPHSFPRTV 9 107 528.2666773953116 1054.5188018574231 2 528.2671386599541 MULTI CID FTMS 0 0 0 7706 345776.65625 0.3758588480284489 7 -0.4633331298828125 7 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 45.69961567697781 0.0497987121815769 4 DPHS{M(Oxidation (M))|F}V 6 3 69.513 0.0 0.0 6.592 0.0 0.0 0.0 369.1905001276001 369.1905001276001 56.81031895404267 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 1.274227503252014 0.0 DPHS{M(Oxidation (M))|F}V 6.592 - 210 + 1 1.823 72613.5 1.0 3260 4451 7706 HBL1_DMSO_200M_050219_2,7713 HBL1_DMSO_200M_050219_2,7713,DPHSFPRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7714 41.702 383.0 342230.0 25 0 31039.0 + 18519 KYQEVTNNL 9 144 554.7852653255493 1107.5559777178985 2 554.7855712771416 MULTI CID FTMS 0 0 0 7706 309873.59375 0.0969017167434652 -5 0.305389404296875 8 Unmodified _KYQEVTNNL_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 122.17920374332846 0.0007092405233684 4 DNTVEKC(Carbamidomethyl (C)){I|L} 8 7 90.934 0.0 0.0 8.2103 0.0 0.0 130.10819513338873 0.0 130.10819513338873 0.0 45.33411252432687 0.0 0.0 0 1.1549471895720984 0.0 1.960409376976188 1.687273075074786 DNTVEKC(Carbamidomethyl (C)){I|L} 8.2103 - 3556 + 1 1.823 103217.1 1.0 3261 4451 7706 HBL1_DMSO_200M_050219_2,7714 HBL1_DMSO_200M_050219_2,7714,KYQEVTNNL True True KYQEVTNNL 41.702297 554.785571277142 59045264.0 7706.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 7.1131876309712725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7715 41.716 800.0 282640.0 25 0 25599.0 -1 VCMAFQKD 8 180 319.8105002251301 0 319.8107482790947 PEAK CID FTMS 0 0 0 7706 198603.875 0.9350390636609232 -4 0.2996788024902344 9 Oxidation (M) _VCM(Oxidation (M))AFQKD_ ENSG00000115239|ENST00000263634|ASB3;nc|ENSG00000115239|Q9Y575-2|ASB3;nc|ENSG00000115239|Q9Y575-3|ASB3 5.731851221503515 0.5787868584755843 4 {M(Oxidation (M))|F} 1 -1 0.27759 0.0 0.0 0.043536 0.0 0.0 247.450821151629 240.0963533990844 487.5471745507134 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.043536 + + 7 + 1 1.823 186630.6 0.6600000262260437 3262 4451 7706 HBL1_DMSO_200M_050219_2,7715 HBL1_DMSO_200M_050219_2,7715,VCMAFQKD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7716 41.73 800.0 151430.0 25 0 11243.0 + 21451 LPHKNITSI 9 158 511.8029507370789 1021.5913485409578 2 511.8033935427666 MULTI CID FTMS 0 0 0 7706 164490.3125 1.0 0 0.0 10 Unmodified _LPHKNITSI_ ENSG00000130449|ENST00000252744|ZSWIM6 72.96794272382148 0.0199516581995792 4 {I|L}PHV[KQ]TS{I|L} 9 3 + 78.462 0.0 0.0 7.6804 7.6804 93.255 0.0 0.0 0.0 30.457574905606748 12.263748473171717 12.263748473171717 12.263748473171717 0 1.829689690656103 1.3979400086720375 0.7134679910804405 0.0 {I|L}PHV[KQ]TS{I|L};{I|L}PHV[KQ]TTV;{I|L}PHV[KQ]ST{I|L};[{I|L}P]H{[QN]|[E{I|L}]|[KN]}T{I|L}S{I|L};[{I|L}P]H{[QN]|[E{I|L}]|[KN]}{I|L}TS{I|L};[{I|L}P]HV{M(Oxidation (M))|F}P{I|L}S{I|L};[{I|L}P]HV{M(Oxidation (M))|F}SP{I|L}{I|L};[{I|L}P]H{[QN]|[E{I|L}]|[KN]}TS{I|L}{I|L};[{I|L}P]HV{M(Oxidation (M))|F}PS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{M(Oxidation (M))|F}P{I|L}S{I|L} 7.6804;6.4799;6.2178;6.0005;5.6559;5.6205;5.5795;5.5072;5.4693;5.2421 -;-;-;-;+;-;-;-;-;- + 887 + 1 1.823 98085.1 0.7599999904632568 3263 4451 7706 HBL1_DMSO_200M_050219_2,7716 HBL1_DMSO_200M_050219_2,7716,LPHKNITSI True True LPHKNITSI 41.729945 511.803393542767 1162714.75 7706.0 ENSG00000130449|ENST00000252744|ZSWIM6 5.800195376078288 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7718 41.746 800.0 270980.0 25 0 18554.0 + 21831 LPNPSSKAI 9 173 463.76842389829727 925.5222948633946 2 463.7687560915947 MULTI CID FTMS 0 0 0 7717 292908.4375 0.9245824342486528 -6 0.3632698059082031 1 Unmodified _LPNPSSKAI_ ENSG00000129292|ENST00000395386|PHF20L1;ENST00000361997.9_1_8:133790074-133829825:+|nuORF;ENST00000395383.5_1_8:133790074-133836319:+|nuORF;nc|ENSG00000129292|A8MW92-4|PHF20L1 67.83816525789305 0.0219346420158844 4 {I|L}PNPSSKA{I|L} 9 0 + 74.95 0.0 0.0 8.0981 8.0981 92.026 0.0 0.0 0.0 25.36074950468564 10.387724664119176 10.387724664119176 9.208187539523747 0 1.4604093769761874 1.6989700043360187 0.7742275032520141 0.3252574989159953 + + {I|L}PNPSSKA{I|L};{I|L}PGGPSSKA{I|L};[VG]DKANP{I|L}{I|L};[VG]DKNAP{I|L}{I|L};{I|L}PNPS[KA]S{I|L};[PS]SKANP{I|L}{I|L};[VG]DKAGGP{I|L}{I|L};[{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NP{I|L}{I|L};[{I|L}P]NPYP{I|L}{I|L};[NP]{I|L}PYP{I|L}{I|L} 8.0981;7.1032;6.9757;6.4536;6.2552;6.1865;5.9808;5.9214;5.8415;5.6881 +;-;-;-;-;-;-;-;-;- + 3847 + 1 1.823 167771.7 0.8700000047683716 3264 4452 7717 HBL1_DMSO_200M_050219_2,7718 HBL1_DMSO_200M_050219_2,7718,LPNPSSKAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7719 41.748 89.0 692390.0 25 0 65339.0 + 3006 AVIREIQNA 9 97 507.29054525159694 1012.566537569994 2 507.2907897830009 MULTI CID FTMS 0 0 0 7717 638561.5 0.3347635429381689 -2 0.1427879333496093 2 Unmodified _AVIREIQNA_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19762333-19763700:-|nuORF;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 43.77239144664712 0.0547478964384323 4 {[VA]|[{I|L}G]}{I|L}RE{I|L}QNA 9 0 + 50.555 0.0 0.0 4.9927 4.9927 81.421 0.0 0.0 0.0 24.8466169989238 25.87443887542142 24.8466169989238 9.208187539523747 0 1.0431576817365438 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}{I|L}RE{I|L}QNA;{[VA]|[{I|L}G]}{I|L}RE{I|L}[AG]NA;{[VA]|[{I|L}G]}{I|L}REA{[VA]|[{I|L}G]}NA;{[VA]|[{I|L}G]}{I|L}REAN[Q{I|L}];{[VA]|[{I|L}G]}{I|L}RTA[TP]NA;{[VA]|[{I|L}G]}{I|L}REAGG[Q{I|L}];{[VA]|[{I|L}G]}{I|L}R[Q{I|L}]ENA 4.9927;4.0834;3.6122;3.5761;2.9219;2.6667;2.5464 +;-;-;-;-;-;- + 199 1 1.823 55143.3 1.0 3265 4452 7717 HBL1_DMSO_200M_050219_2,7719 HBL1_DMSO_200M_050219_2,7719,AVIREIQNA True True AVIREIQNA 41.747798 507.290789783001 30261524.0 7717.0 nc|ENSG00000105726|Q9HD20-2|ATP13A1;;ENSG00000105726|ENST00000357324|ATP13A1;;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;;ENST00000469641.5_1_19:19762333-19763700:-|nuORF 5.419295946756999 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7720 41.762 800.0 316350.0 25 0 15285.0 -1 CCWINETY 8 229 544.71217947658 1087.40980601996 2 544.7126953005791 MULTI CID FTMS 0 0 0 7717 198538.875 0.679150454215868 -2 0.1427879333496093 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))CWINETY_ ENSG00000155897|ENST00000286355|ADCY8 18.13498045792455 0.6430038125133779 4 TMT[CS]TY 7 -1 27.879 0.0 0.0 2.5638 0.0 0.0 282.1213671545286 0.0 282.1213671545286 0.0 12.31610333734638 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 TMT[CS]TY 2.5638 - 1235 + 1 1.823 189051.9 0.9300000071525574 3266 4452 7717 HBL1_DMSO_200M_050219_2,7720 HBL1_DMSO_200M_050219_2,7720,CCWINETY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7721 41.77 471.0 379600.0 25 0 51206.0 + 5087 DGYSVSHQI 9 160 503.2352283938329 1004.455903854466 2 503.2345458865166 MULTI CID FTMS 0 0 0 7717 194833.59375 0.5885151164235144 -2 0.1427879333496093 4 Unmodified _DGYSVSHQI_ ENSG00000165699|ENST00000298552|TSC1;ENST00000493467.5_1_9:135785858-135804259:-|nuORF;nc|ENSG00000165699|Q92574-2|TSC1 26.268140514670165 0.1969607489560049 4 SV[HQ]TV 6 6 21.588 0.0 0.0 2.1492 0.0 0.0 335.11050579710576 0.0 335.11050579710576 0.0 1.9174957218492168 0.0 0.0 0 0.3054621874040891 0.0 0.1694451763165201 0.6203715150305281 SV[HQ]TV 2.1492 - 461 + 1 1.823 136386.6 1.0 3267 4452 7717 HBL1_DMSO_200M_050219_2,7721 HBL1_DMSO_200M_050219_2,7721,DGYSVSHQI False True DGYSVSHQI 41.769965 503.234545886517 4325141.0 7717.0 ENSG00000165699|ENST00000298552|TSC1;;ENST00000493467.5_1_9:135785858-135804259:-|nuORF;;nc|ENSG00000165699|Q92574-2|TSC1 4.989706675211589 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7722 41.784 800.0 163050.0 25 0 10222.0 -1 0 70 877.0043482545235 4379.985358939617 5 877.4053832888603 MULTI CID FTMS 0 0 0 7717 107919.640625 1.0 0 0.0 5 4 AASA 4 -1 21.938 0.0 0.0 0.50087 0.0 0.0 584.1370415695582 3492.681330667985 4076.818372237544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AASA 0.50087 - 38 + 1 1.823 97019.7 0.6000000238418579 3268 4452 7717 HBL1_DMSO_200M_050219_2,7722 HBL1_DMSO_200M_050219_2,7722, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7724 41.788 3.2 17434000.0 25 0 1397400.0 + 38881 TVKKTFFEDV 10 65 405.2193556320232 1212.6362374962696 3 405.2196227908134 MULTI CID FTMS 0 0 0 7723 16884804.0 1.0 0 0.0 1 Unmodified _TVKKTFFEDV_ REV__ENSG00000079691|ENST00000329474|CARMIL1;REV__nc|ENSG00000079691|Q5VZK9-2|CARMIL1 13.042465956692816 0.6287021003332052 4 Y{I|L}TVD 5 -1 35.177 0.0 0.0 2.9009 0.0 0.0 603.3374123759494 0.0 603.3374123759494 0.0 11.593793813122062 0.0 0.0 0 0.0 0.0 0.5 0.0 Y{I|L}TVD 2.9009 - 31 1 1.823 48970.4 1.0 3269 4453 7723 HBL1_DMSO_200M_050219_2,7724 HBL1_DMSO_200M_050219_2,7724,TVKKTFFEDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7725 41.789 13.0 3481700.0 25 0 285600.0 + 43666 YARQGQIEV 9 70 532.2807022178657 1062.5468515025314 2 532.2803832888603 MULTI CID FTMS 0 0 0 7723 4247670.0 1.0 0 0.0 2 Unmodified _YARQGQIEV_ ENSG00000064393|ENST00000406875|HIPK2;ENSG00000110422|ENST00000303296|HIPK3;ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2;nc|ENSG00000110422|Q9H422-2|HIPK3;nc|ENSG00000163349|Q86Z02-2|HIPK1 61.357469665136826 0.0253304979873734 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RQGQ{I|L}EV 9 0 + 65.628 0.0 0.0 6.1765 6.1765 86.33 0.0 0.0 0.0 12.272437815030628 16.478174818886373 12.272437815030628 9.208187539523747 0 0.3054621874040891 1.3010299956639813 0.0 0.6989700043360187 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RQGQ{I|L}EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RQG[AG]{I|L}EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[AG]GQ{I|L}EV;{[QN]|[E{I|L}]|[KN]}[Y{I|L}]GQ{I|L}EV;{[QN]|[E{I|L}]|[KN]}S[{M(Oxidation (M))|F}V]Q{I|L}EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[AG]G[AG]{I|L}EV;{[QN]|[E{I|L}]|[KN]}[Y{I|L}]G[AG]{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}T[{M(Oxidation (M))|F}V]Q{I|L}EV;{[QN]|[E{I|L}]|[KN]}S[{M(Oxidation (M))|F}V][AG]{I|L}EV;[{I|L}T]D[{M(Oxidation (M))|F}V]Q{I|L}EV 6.1765;5.3098;5.3098;5.0214;4.7381;4.4473;4.1548;4.0372;3.8715;3.3049 +;-;-;-;-;-;-;-;-;- + 337 1 1.823 40689.7 1.0 3270 4453 7723 HBL1_DMSO_200M_050219_2,7725 HBL1_DMSO_200M_050219_2,7725,YARQGQIEV True True YARQGQIEV 41.78929 532.28038328886 56919628.0 7723.0 nc|ENSG00000064393|Q9H2X6-2|HIPK2;;nc|ENSG00000110422|Q9H422-2|HIPK3;;nc|ENSG00000163349|Q86Z02-2|HIPK1;;ENSG00000163349|ENST00000426820|HIPK1;;ENSG00000110422|ENST00000303296|HIPK3;;ENSG00000064393|ENST00000406875|HIPK2;;nc|ENSG00000064393|Q9H2X6-3|HIPK2 5.80974817276001 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7726 41.792 113.0 522330.0 25 0 17633.0 + + -1 EESNYELEGKIK 12 106 480.239876801627 1437.6978010050811 3 480.2403137087822 MULTI CID FTMS 0 0 0 7723 515005.65625 1.0 0 0.0 3 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LSKRALC(Carbamidomethyl (C))QC(Carbamidomethyl (C))R_ ENSG00000186395|ENST00000269576|KRT10;P13645;P02535-1 2.434785330301024 0.8636604596255422 4 EE[NS]YE{I|L}E[KG]K{I|L} 12 -1 + 52.091 0.0 0.0 3.6232 3.6232 65.61 0.0 0.0 0.0 12.956349637772746 1.545087942141535 1.545087942141535 1.545087942141535 0 0.3807196863200844 0.8239087409443188 0.8494850021680094 0.0 EE[NS]YE{I|L}E[KG]K{I|L};EE[NS]YE{I|L}E[KG]{I|L}K;[NS]{I|L}{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[NS][HC];{[TV]|[{I|L}S]}N{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[NS][HC];[KG]E{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[NS][HC];GGS{I|L}{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[NS][HC] 3.6232;3.5158;1.871;1.514;1.426;1.1494 -;-;-;-;-;- 358 + 1 1.823 53140.1 1.0 3271 4453 7723 HBL1_DMSO_200M_050219_2,7726 HBL1_DMSO_200M_050219_2,7726,MLSKRALCQCR False False EESNYELEGKIK 41.791648 480.240313708782 3637782.25 7723.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 6.1656514803568525 3.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7727 41.793 72.0 534870.0 25 0 55370.0 + 24950 MPPPPPQGV 9 82 468.2364995746263 0 468.2363159060478 PEAK CID FTMS 0 0 0 7723 406971.1875 0.5093754960054765 -6 0.4114036560058594 4 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 40.44857923139169 0.0595120860820594 4 PP 2 7 13.628 0.0 0.0 1.4584 0.0 0.0 399.2098266260916 338.1184481256469 737.3282747517385 0.0 0.0 0.0 0.0 0 0.566901560044258 0.0 0.0 0.0 + PP 1.4584 + + 35 + 1 1.823 34845.7 1.0 3272 4453 7723 HBL1_DMSO_200M_050219_2,7727 HBL1_DMSO_200M_050219_2,7727,MPPPPPQGV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7728 41.797 163.0 362230.0 25 0 123550.0 + 12822 GVTIPSTALA 10 73 465.26844440862754 928.5223358840552 2 465.2632018923759 MULTI CID FTMS 0 0 0 7723 360331.625 0.037989760533695 -24 0.9144973754882812 5 Unmodified _GVTIPSTALA_ REV__ENSG00000104957|ENST00000221554|YJU2B;REV__ENST00000593174.5_1_19:13869843-13873879:+|nuORF 3.5964929083625545 0.7100006075494749 4 V 1 -1 10.969 0.0 0.0 1.1814 0.0 0.0 811.4428432466513 0.0 811.4428432466513 0.0 7.870156338638594 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1814 + + 18 + 1 1.823 49821.4 1.0 3273 4453 7723 HBL1_DMSO_200M_050219_2,7728 HBL1_DMSO_200M_050219_2,7728,GVTIPSTALA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7729 41.8 171.0 448880.0 25 0 56818.0 + 43837 YFHDGVRVAA 10 86 378.860887339138 0 378.8608886599541 PEAK CID FTMS 0 0 0 7723 315544.875 0.8708925802069335 -1 0.0538444519042968 6 Unmodified _YFHDGVRVAA_ ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5 23.78978130925829 0.2677467798970439 4 DR 2 8 7.4743 0.0 0.0 0.98904 0.0 0.0 69.33489032345172 412.2310274713501 481.56591779480175 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DR 0.98904 - 27 + 1 1.823 66301.1 1.0 3274 4453 7723 HBL1_DMSO_200M_050219_2,7729 HBL1_DMSO_200M_050219_2,7729,YFHDGVRVAA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7730 41.813 749.0 112780.0 25 0 9399.2 37976 TNEDSSLLAKD 11 127 596.7899741056209 1191.5653952780417 2 596.7881347537041 MULTI CID FTMS 0 0 0 7723 260385.203125 0.441990185995677 3 -0.2311935424804687 7 Unmodified _TNEDSSLLAKD_ ENSG00000156599|ENST00000287169|ZDHHC5;ENST00000529480.1_1_11:57457792-57467500:+|nuORF;nc|ENSG00000156599|Q9C0B5-2|ZDHHC5 26.268140514670165 0.4754186812857754 4 [VS]{I|L}[C(Carbamidomethyl (C))H][YE]VW 9 11 + 28.023 0.0 0.0 2.3518 2.3518 65.284 0.0 0.0 0.0 2.823383885569516 0.3470403574558425 0.3470403574558425 2.823383885569516 0 0.5796896906561032 2.0 0.2614393726401688 0.0 [VS]{I|L}[C(Carbamidomethyl (C))H][YE]VW;{[QS]|[NT]}ESE{[QS]|[NT]}{I|L}VW;{[ES]|[DT]|[{I|L}C]}QSE{[QS]|[NT]}{I|L}VW;[AG]ESSE{[QS]|[NT]}{I|L}VW;[AG]SESE{[QS]|[NT]}{I|L}VW;{[QS]|[NT]}ESV[MN]{I|L}VW;{[ES]|[DT]|[{I|L}C]}QSV[MN]{I|L}VW;[AG]ESSV[MN]{I|L}VW;[AG]SESV[MN]{I|L}VW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSE{[QS]|[NT]}{I|L}VW 2.3518;2.1148;2.0912;2.0747;2.0651;1.9323;1.9087;1.8922;1.8826;1.8515 -;-;-;-;-;-;-;-;-;- 858 1 1.823 67995.3 1.0 3275 4453 7723 HBL1_DMSO_200M_050219_2,7730 HBL1_DMSO_200M_050219_2,7730,TNEDSSLLAKD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7731 41.827 800.0 140970.0 25 0 10653.0 27222 PGLEEHWAL 9 148 526.2622329717307 1050.5099130102612 2 526.2644531130791 MULTI CID FTMS 0 0 0 7723 136387.3125 0.7223473839614959 -1 0.0538444519042968 8 Unmodified _PGLEEHWAL_ ENST00000376499.7_2_9:84303922-84304000:-|nuORF 30.22481116460888 0.1466181017706357 4 PQE[QP]GTA{I|L} 9 6 49.148 0.0 0.0 4.6785 0.0 0.0 111.03252608466951 0.0 111.03252608466951 0.0 38.17918449261214 0.0 0.0 0 1.674742501084005 0.0 0.8807196863200843 0.0 PQE[QP]GTA{I|L} 4.6785 - 1331 1 1.823 91383.1 0.8100000023841858 3276 4453 7723 HBL1_DMSO_200M_050219_2,7731 HBL1_DMSO_200M_050219_2,7731,PGLEEHWAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7732 41.84 800.0 209140.0 25 0 9939.0 + 30678 RFPEHVREI 9 177 394.8834829426876 1181.6286194282627 3 395.2165405154228 MULTI CID FTMS 0 0 0 7723 101215.546875 0.5666208142383599 -17 0.6232185363769531 9 Unmodified _RFPEHVREI_ ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR 15.538449434065043 0.4160756728588197 4 {I|L}MREHV 6 6 54.87 0.0 0.0 4.6436 0.0 0.0 0.0 413.21587999885696 413.21587999885696 40.83564826594065 0.0 0.0 0.0 0 1.1237125054200234 1.6989700043360187 0.4247425010840047 0.0 {I|L}MREHV 4.6436 - 433 + 1 1.823 135387.5 0.5799999833106995 3277 4453 7723 HBL1_DMSO_200M_050219_2,7732 HBL1_DMSO_200M_050219_2,7732,RFPEHVREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7733 41.854 800.0 155070.0 25 0 15461.0 + 43836 YFHDGVRVAA 10 118 567.7884958660136 1133.562438798827 2 567.7875244021416 MULTI CID FTMS 0 0 0 7723 97884.2265625 1.0 0 0.0 10 Unmodified _YFHDGVRVAA_ ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5 34.93206674587334 0.2110832994570416 4 Y{M(Oxidation (M))|F}HDR 5 5 49.363 0.0 0.0 4.3547 0.0 0.0 0.0 412.2316988580688 412.2316988580688 36.59863006256506 0.0 0.0 0.0 0 1.1382104921644451 0.0 0.4247425010840047 0.0 Y{M(Oxidation (M))|F}HDR 4.3547 - 166 + 1 1.823 95982.8 0.75 3278 4453 7723 HBL1_DMSO_200M_050219_2,7733 HBL1_DMSO_200M_050219_2,7733,YFHDGVRVAA False True YFHDGVRVAA 41.854342 567.787524402142 3514265.6875 7723.0 ENSG00000065150|ENST00000651721|IPO5;;nc|ENSG00000065150|O00410-3|IPO5;;nc|ENSG00000065150|O00410-2|IPO5 7.166919708251953 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7735 41.859 3.6 13179000.0 25 0 1324100.0 + 24981 MPPPPPQGV 9 81 460.23852327962805 918.462493626056 2 460.2391540408134 MULTI CID FTMS 0 0 0 7734 15892015.0 0.8575423890055097 -4 0.2672195434570312 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 74.39630413441286 0.0193995060682538 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 49.526 0.0 0.0 5.3922 5.3922 85.028 0.0 0.0 0.0 6.064921830680703 23.877268672201453 6.064921830680703 11.913318520440797 0 1.805462187404089 0.0 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{[HG]|PP}NNPPQR;{[HG]|PP}GGNPPQR;{[HG]|PP}NGGPPQR;[VG][EP]HPQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;{[HG]|PP}GGGGPPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR 5.3922;4.0951;3.0867;3.0867;2.9947;2.2119;2.0841;1.819 -;-;-;-;-;-;-;- 177 1 1.823 42159.0 1.0 3279 4454 7734 HBL1_DMSO_200M_050219_2,7735 HBL1_DMSO_200M_050219_2,7735,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7736 41.86 20.0 2874300.0 25 0 555290.0 + 15367 IPNEKIRNI 9 69 366.2207244973479 1095.6403440922436 3 366.2205993533134 MULTI CID FTMS 0 0 0 7734 2619183.25 0.8133531662929225 1 -0.08172607421875 2 Unmodified _IPNEKIRNI_ ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1 27.628801355627647 0.1796483985696185 4 {I|L}PNEK{I|L} 6 3 53.136 0.0 0.0 4.8498 0.0 0.0 0.0 398.2163179986938 398.2163179986938 30.204262829037845 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.7742275032520141 + {I|L}PNEK{I|L} 4.8498 + + 50 + 1 1.823 52440.6 1.0 3280 4454 7734 HBL1_DMSO_200M_050219_2,7736 HBL1_DMSO_200M_050219_2,7736,IPNEKIRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7737 41.861 27.0 1931100.0 25 0 813480.0 + 5815 DPRHGRYLTV 10 31 607.3254071765065 1212.6362614198129 2 607.3257324099541 MULTI CID FTMS 0 0 0 7734 2208805.0 0.828719601474118 1 -0.08172607421875 3 Unmodified _DPRHGRYLTV_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000454403.1_1_13:41958968-41959286:-|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3 5.296884461304476 0.7021353017287152 4 DV 2 8 20.969 0.0 0.0 1.7292 0.0 0.0 0.0 995.5199898969 995.5199898969 20.96910013008056 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV 1.7292 - 4 + 1 1.823 45934.0 1.0 3281 4454 7734 HBL1_DMSO_200M_050219_2,7737 HBL1_DMSO_200M_050219_2,7737,DPRHGRYLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7738 41.862 32.0 1548800.0 25 0 172790.0 + 2187 AQAPDLQRV 9 76 499.2749073758181 996.5352618184362 2 499.2752868533134 MULTI CID FTMS 0 0 0 7734 2083250.0 0.0441535618598342 -6 0.4513626098632812 4 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 13.042465956692816 0.4836390050082244 4 [QA]A 3 6 20.335 0.0 0.0 2.0405 0.0 0.0 0.0 723.378956236658 723.378956236658 18.344829805571106 0.0 0.0 0.0 0 1.0 0.0 0.0 0.2887254899964357 + [QA]A 2.0405 + + 10 1 1.823 43112.8 1.0 3282 4454 7734 HBL1_DMSO_200M_050219_2,7738 HBL1_DMSO_200M_050219_2,7738,AQAPDLQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7739 41.863 25.0 1537500.0 25 0 112190.0 + 26265 NQMPTQPQV 9 76 521.7523614149425 1041.4901698966848 2 521.7531616091728 MULTI CID FTMS 0 0 0 7734 1998306.5 0.978115453762744 -1 0.070587158203125 5 Unmodified _NQMPTQPQV_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 43.85829265575387 0.0542763391141878 4 PN{I|L} 3 8 17.764 0.0 0.0 1.7056 0.0 0.0 699.2990784859826 0.0 699.2990784859826 0.0 7.167586941727574 0.0 0.0 0 0.5 0.0 0.0 0.7134679910804405 PN{I|L} 1.7056 - 72 + 1 1.823 36558.1 1.0 3283 4454 7734 HBL1_DMSO_200M_050219_2,7739 HBL1_DMSO_200M_050219_2,7739,NQMPTQPQV True True NQMPTQPQV 41.863412 521.753161609173 40781388.0 7734.0 EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;;ENSG00000100393|ENST00000263253|EP300 6.685985406239827 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7740 41.865 35.0 959060.0 25 0 173640.0 -1 ECKECRKCFY 10 53 711.7990622814344 1421.5835716296688 2 711.8000976443291 MULTI CID FTMS 0 0 0 7734 1521906.875 0.6344331194352782 2 -0.1606063842773437 6 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFY_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 6.723162845929126 0.6955379296933136 4 HEAQQDA{M(Oxidation (M))|F}Y 9 -1 63.906 0.0 0.0 4.4954 0.0 0.0 314.12361342597814 0.0 314.12361342597814 0.0 46.91630954681237 0.0 0.0 0 1.274227503252014 0.0 0.4247425010840047 0.3807196863200844 HEAQQDA{M(Oxidation (M))|F}Y 4.4954 - 211 1 1.823 28096.2 1.0 3284 4454 7734 HBL1_DMSO_200M_050219_2,7740 HBL1_DMSO_200M_050219_2,7740,ECKECRKCFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7741 41.87 287.0 343110.0 25 0 38307.0 + 21880 LPPESTQV 8 109 435.7319671401997 869.4493813471995 2 435.7319518923759 MULTI CID FTMS 0 0 0 7734 256967.65625 0.7910160092201903 -2 0.1244316101074218 7 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 32.116972079565 0.368454113111938 4 [{I|L}P]A{I|L} 4 6 27.396 0.0 0.0 3.1509 0.0 0.0 0.0 472.1852205865844 472.1852205865844 12.791681396005998 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 [{I|L}P]A{I|L} 3.1509 - 163 + 1 1.823 81689.7 1.0 3285 4454 7734 HBL1_DMSO_200M_050219_2,7741 HBL1_DMSO_200M_050219_2,7741,LPPESTQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7742 41.884 800.0 347810.0 25 0 31386.0 + 5689 DPHSFPRTV 9 233 352.5139443299147 1054.520003589944 3 352.5138427615166 MULTI CID FTMS 0 0 0 7734 196502.546875 0.0825731419419165 15 -0.6363945007324219 8 Unmodified _DPHSFPRTV_ ENSG00000107672|ENST00000369023|NSMCE4A;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 23.78978130925829 0.2284941198415988 4 [DP]HS{M(Oxidation (M))|F}PRTV 9 0 + 34.555 0.0 0.0 3.2768 3.2768 72.742 0.0 0.0 0.0 14.264268467029892 4.029023130893577 4.029023130893577 6.850342263927267 0 0.3494850021680094 0.585026652029182 0.3054621874040891 0.2396518287104437 + + [DP]HS{M(Oxidation (M))|F}PRTV;[DP]HS{M(Oxidation (M))|F}PRS{I|L};{[ET]|[MV]}[K{I|L}]{M(Oxidation (M))|F}SH{[HG]|PP} 3.2768;2.6272;1.9552 +;-;- + 239 + 1 1.823 222408.6 0.7400000095367432 3286 4454 7734 HBL1_DMSO_200M_050219_2,7742 HBL1_DMSO_200M_050219_2,7742,DPHSFPRTV False True DPHSFPRTV 41.883675 352.513842761517 177081194.0 7734.0 ENSG00000107672|ENST00000369023|NSMCE4A;;ENST00000483541.1_1_10:123719867-123724812:-|nuORF 7.350818951924642 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7743 41.898 800.0 185680.0 25 0 12790.0 + 29720 QPLEQNQTI 9 173 535.7784081039384 1069.5422632746768 2 535.7795898318291 MULTI CID FTMS 0 0 0 7734 176344.625 0.3158796024963489 -4 0.2672195434570312 9 Unmodified _QPLEQNQTI_ ENSG00000163848|ENST00000360647|ZNF148;ENST00000497929.1_1_3:124951187-125011317:-|nuORF 92.4914307365334 0.0139747738690111 4 {[QN]|[E{I|L}]|[KN]}[KP]QNQT{I|L} 9 3 + 66.812 0.0 0.0 6.2468 6.2468 81.982 0.0 0.0 0.0 5.278749836353114 14.973024840566469 5.278749836353114 5.278749836353114 0 0.4247425010840047 1.154901959985743 2.004432191740108 1.669135408287633 {[QN]|[E{I|L}]|[KN]}[KP]QNQT{I|L};[{I|L}P]QEQNQT{I|L};[QP]{I|L}EQNQT{I|L};{[QN]|[E{I|L}]|[KN]}[KP][AG]NQT{I|L};{[QN]|[E{I|L}]|[KN]}[KP]QGGQT{I|L};{[QN]|[E{I|L}]|[KN]}[KP]QN[AG]T{I|L};[AG]P{I|L}EQNQT{I|L};[DP][RV]QNQT{I|L};[{I|L}P]QEQN[AG]T{I|L};[{I|L}P]QEQGGQT{I|L} 6.2468;5.7532;5.5959;5.3859;5.3859;5.3859;5.2026;5.1657;4.8923;4.8923 -;-;+;-;-;-;-;-;-;- + 2251 1 1.823 117099.7 0.8399999737739563 3287 4454 7734 HBL1_DMSO_200M_050219_2,7743 HBL1_DMSO_200M_050219_2,7743,QPLEQNQTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7744 41.907 511.0 339560.0 25 0 19706.0 + 3230 AWPEQVRLS 9 169 362.5294940101128 1084.5666526305386 3 362.5294067263603 MULTI CID FTMS 0 0 0 7734 139543.453125 0.0460925150815145 -33 1.327617645263672 10 Unmodified _AWPEQVRLS_ REV__ENSG00000140853|ENST00000688547|NLRC5;REV__ENST00000545081.5_1_16:57093337-57116437:+|nuORF;REV__nc|ENSG00000140853|Q86WI3-4|NLRC5;REV__nc|ENSG00000140853|Q86WI3-6|NLRC5 24.020572477871973 0.2255576514309169 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PQQ[KQ]S 9 -1 + 48.156 0.0 0.0 4.4401 4.4401 71.971 0.0 0.0 0.0 25.91836442676655 4.1149997493403845 4.1149997493403845 3.3226467981605623 0 0.3807196863200844 1.5228787452803376 1.2971062485323517 0.3807196863200844 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PQQ[KQ]S;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L}QQ[KQ]S;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}P[KQ]QQS;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L}[KQ]QQS 4.4401;4.1338;3.6666;3.3603 -;-;-;- 646 + 1 1.823 147903.9 1.0 3288 4454 7734 HBL1_DMSO_200M_050219_2,7744 HBL1_DMSO_200M_050219_2,7744,AWPEQVRLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7745 41.92 800.0 318790.0 25 0 31090.0 + 13927 HYGQSGISM 9 187 490.2187290486804 978.4229051641609 2 490.2183410525322 MULTI CID FTMS 0 0 0 7734 126174.953125 0.7916104669623182 -3 0.18231201171875 11 Unmodified _HYGQSGISM_ ENSG00000166888|ENST00000300134|STAT6;ENST00000555222.5_1_12:57490357-57492756:-|nuORF;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6 74.92900055777586 0.0191935851694334 4 {[WN]|[YH]}GQSG{I|L}SM 9 0 + 61.894 0.0 0.0 6.3259 6.3259 86.931 0.0 0.0 0.0 21.12704280191288 46.40941647255978 21.12704280191288 9.208187539523747 0 0.5 1.3979400086720375 1.805462187404089 0.0 + + {[WN]|[YH]}GQSG{I|L}SM;{[WN]|[YH]}G[AG]SG{I|L}SM;{[WN]|[YH]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{I|L}DM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HN]SG{I|L}SM;{[WN]|[YH]}G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DM;{[WN]|[YH]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TP]SM;{[WN]|[YH]}GQ[KT]DM;[{I|L}P][C(Carbamidomethyl (C))D]SG{I|L}SM;{[QS]|[NT]}D{[QN]|[E{I|L}]|[KN]}G{I|L}SM;[VP]{[C(Carbamidomethyl (C))E]|[WC]}SG{I|L}SM 6.3259;5.3848;3.7411;3.6483;3.4802;3.3402;3.2318;2.7846;2.7561;2.673 +;-;-;-;-;-;-;-;-;- + 446 1 1.823 191629.1 0.7300000190734863 3289 4454 7734 HBL1_DMSO_200M_050219_2,7745 HBL1_DMSO_200M_050219_2,7745,HYGQSGISM True True HYGQSGISM 41.920325 490.218341052532 1476902.625 7734.0 nc|ENSG00000166888|P42226-3|STAT6;;nc|ENSG00000166888|P42226-2|STAT6;;ENST00000555222.5_1_12:57490357-57492756:-|nuORF;;ENSG00000166888|ENST00000300134|STAT6 6.238091468811035 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7746 41.928 406.0 291160.0 25 0 68972.0 + -1 LGAQCCPSV 9 114 496.2202061655906 990.4258593979812 2 496.2200805544853 MULTI CID FTMS 0 0 0 7734 121932.1015625 0.4001144047665559 2 -0.1606063842773437 12 2 Carbamidomethyl (C) _LGAQC(Carbamidomethyl (C))C(Carbamidomethyl (C))PSV_ REV__ENST00000560529.1_1_15:83358202-83378458:-|nuORF 28.486842064014134 0.1687311288560894 4 {[VA]|[{I|L}G]}[QT]P[NP]NA 9 -1 25.767 0.0 0.0 2.6016 0.0 0.0 0.0 94.95582128003984 94.95582128003984 2.4253842356181856 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.3252574989159953 {[VA]|[{I|L}G]}[QT]P[NP]NA 2.6016 - 235 1 1.823 94137.9 1.0 3290 4454 7734 HBL1_DMSO_200M_050219_2,7746 HBL1_DMSO_200M_050219_2,7746,LGAQCCPSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7747 41.936 388.0 235970.0 25 0 15037.0 + 32001 RVIDHSQYL 9 103 565.8009909725621 1129.587429011924 2 565.8019286990166 MULTI CID FTMS 0 0 0 7734 108232.328125 0.4068702399481414 -2 0.1244316101074218 13 Unmodified _RVIDHSQYL_ ENSG00000183826|ENST00000481247|BTBD9;nc|ENSG00000183826|Q96Q07-2|BTBD9;nc|ENSG00000183826|Q96Q07-3|BTBD9 45.69961567697781 0.0497987121815769 4 DHSQY{I|L} 6 3 55.795 0.0 0.0 4.9394 0.0 0.0 368.2546559064469 0.0 368.2546559064469 0.0 45.33722858124108 0.0 0.0 0 0.7614393726401688 0.0 0.8494850021680094 0.3054621874040891 + DHSQY{I|L} 4.9394 + + 165 1 1.823 72120.0 1.0 3291 4454 7734 HBL1_DMSO_200M_050219_2,7747 HBL1_DMSO_200M_050219_2,7747,RVIDHSQYL True True RVIDHSQYL 41.935993 565.801928699017 1770174.25 7734.0 ENSG00000183826|ENST00000481247|BTBD9;;nc|ENSG00000183826|Q96Q07-2|BTBD9;;nc|ENSG00000183826|Q96Q07-3|BTBD9 7.205389817555745 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7749 41.941 75.0 904550.0 25 0 155020.0 + 10723 FYDDKKYTY 9 85 414.86072042111215 1241.5603318635365 3 414.8607360720634 MULTI CID FTMS 0 0 0 7748 424300.6875 0.2522744349586517 2 -0.1254768371582031 1 Unmodified _FYDDKKYTY_ ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 32.78568957990786 0.1150597335874693 4 {M(Oxidation (M))|F}YD 3 6 49.411 0.0 0.0 3.9798 0.0 0.0 0.0 813.378939380774 813.378939380774 34.745462655597095 0.0 0.0 0.0 0 0.5242275032520141 1.5228787452803376 0.4247425010840047 0.0 + {M(Oxidation (M))|F}YD 3.9798 + + 131 + 1 1.822 59659.9 1.0 3292 4455 7748 HBL1_DMSO_200M_050219_2,7749 HBL1_DMSO_200M_050219_2,7749,FYDDKKYTY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7750 41.945 191.0 393410.0 25 0 42887.0 + 10725 FYDDKKYTY 9 81 621.7873831838443 1241.5602134344886 2 621.7877685427666 MULTI CID FTMS 0 0 0 7748 371199.78125 0.2619292730567533 3 -0.1992950439453125 2 Unmodified _FYDDKKYTY_ ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 59.36838082759317 0.0264317782606298 4 {M(Oxidation (M))|F}YDDKSKDD 9 4 68.197 0.0 0.0 5.4929 0.0 0.0 0.0 125.0723818414672 125.0723818414672 37.800857501608434 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.805462187404089 0.0 {M(Oxidation (M))|F}YDDKSKDD 5.4929 - 550 + 1 1.822 61158.2 1.0 3293 4455 7748 HBL1_DMSO_200M_050219_2,7750 HBL1_DMSO_200M_050219_2,7750,FYDDKKYTY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7751 41.947 70.0 641820.0 25 0 152440.0 + 28014 PMPPRTNE 8 70 471.2300881821903 940.4456234311806 2 471.2297241091728 MULTI CID FTMS 0 0 0 7748 546220.5625 0.7219750568131642 -6 0.4316864013671875 3 Unmodified _PMPPRTNE_ REV__ENSG00000101203|ENST00000358894|COL20A1;REV__ENST00000471582.5_1_20:61956720-61961007:+|nuORF;REV__ENST00000479501.5_1_20:61950534-61961007:+|nuORF;REV__nc|ENSG00000101203|Q9P218-2|COL20A1;REV__nc|ENSG00000101203|Q9P218-3|COL20A1 15.847184025352805 0.6768015514314958 4 MPPP 4 -1 55.79 0.0 0.0 5.9323 0.0 0.0 0.0 515.2238863580686 515.2238863580686 48.80001899740286 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 MPPP 5.9323 - 68 + 1 1.822 39505.0 1.0 3294 4455 7748 HBL1_DMSO_200M_050219_2,7751 HBL1_DMSO_200M_050219_2,7751,PMPPRTNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7752 41.95 195.0 644720.0 25 0 97649.0 + 15370 IPNEKIRNI 9 100 548.8271833472782 1095.6398137613562 2 548.8276855349541 MULTI CID FTMS 0 0 0 7748 532373.125 0.6501093504874883 2 -0.1254768371582031 4 Unmodified _IPNEKIRNI_ ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1 43.77239144664712 0.0547478964384323 4 {I|L}PNEK{I|L}R 7 2 73.281 0.0 0.0 6.6884 0.0 0.0 0.0 242.11469446353752 242.11469446353752 51.8541885755802 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.805462187404089 + {I|L}PNEK{I|L}R 6.6884 + + 111 + 1 1.822 102516.7 1.0 3295 4455 7748 HBL1_DMSO_200M_050219_2,7752 HBL1_DMSO_200M_050219_2,7752,IPNEKIRNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7753 41.954 173.0 472260.0 25 0 38225.0 + 21091 LPAGPAPKV 9 83 425.2631464009008 848.5117398686017 2 425.2633239626884 MULTI CID FTMS 0 0 0 7748 406684.4375 0.2676021392869137 4 -0.2608108520507812 5 Unmodified _LPAGPAPKV_ ENSG00000254505|ENST00000347519|CHMP4A;nc|ENSG00000254505|Q9BY43-2|CHMP4A 48.345845343767074 0.0439967357579942 4 {I|L}PAG[PA]PKV 9 0 + 61.041 0.0 0.0 7.1939 7.1939 83.284 0.0 0.0 0.0 45.8391254042489 6.61159286695316 6.61159286695316 3.710149894766701 0 1.5 1.5228787452803376 0.0 0.0 + + {I|L}PAG[PA]PKV;{I|L}PA[QP]PKV;{I|L}PQ[PA]PKV 7.1939;6.7566;6.0471 +;-;- + 248 + 1 1.822 65792.0 1.0 3296 4455 7748 HBL1_DMSO_200M_050219_2,7753 HBL1_DMSO_200M_050219_2,7753,LPAGPAPKV True True LPAGPAPKV 41.953687 425.263323962688 22316786.0 7748.0 ENSG00000254505|ENST00000347519|CHMP4A;;nc|ENSG00000254505|Q9BY43-2|CHMP4A 5.630467891693115 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7754 41.96 333.0 338480.0 25 0 27423.0 -1 0 99 541.2325387693526 540.2252623027525 1 541.2310058474541 MULTI CID FTMS 0 0 0 7748 279662.3125 0.4282563019881783 3 -0.1992950439453125 6 4 YMEV 4 -1 + 46.306 0.0 0.0 8.5715 8.5715 86.646 0.0 0.0 0.0 4.082044802559423 4.082044802559423 4.082044802559423 4.082044802559423 0 0.4247425010840047 2.0 0.2215141619232908 0.0 YMEV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YD 8.5715;7.8159;4.4324 -;-;- 76 + 1 1.822 89400.2 1.0 3297 4455 7748 HBL1_DMSO_200M_050219_2,7754 HBL1_DMSO_200M_050219_2,7754, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7755 41.974 800.0 195220.0 25 0 9390.4 + -1 VGAHAGEYGAEALER 15 153 510.58255679435007 1528.7258409832502 3 510.5829955935478 MULTI CID FTMS 0 0 0 7748 208672.109375 0.812559991258069 1 -0.0788803100585937 7 Oxidation (M) _RQYQM(Oxidation (M))NKNFER_ ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2;ENST00000472694.1_1_16:226715-226811:+|nuORF 2.2527281973983926 0.8645194170429107 4 {I|L}YGAEA{I|L}ER 9 -1 85.971 0.0 0.0 5.6237 0.0 0.0 508.227594873537 0.0 508.227594873537 0.0 68.53837233798197 0.0 0.0 0 2.1989700043360187 0.0 0.6421590589602533 0.4194451763165202 {I|L}YGAEA{I|L}ER 5.6237 - 10706 + 1 1.822 123473.3 0.8899999856948853 3298 4455 7748 HBL1_DMSO_200M_050219_2,7755 HBL1_DMSO_200M_050219_2,7755,RQYQMNKNFER False False VGAHAGEYGAEALER 41.973541 510.582995593548 2306144.25 7748.0 ENSG00000206172|ENST00000320868|HBA1;;ENSG00000188536|ENST00000251595|HBA2;;ENST00000472694.1_1_16:226715-226811:+|nuORF 5.190305709838867 3.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7756 41.987 800.0 363650.0 25 0 39589.0 + 43832 YFHDATRVY 9 140 586.279876383162 1170.545199833124 2 586.2800170779228 MULTI CID FTMS 0 0 0 7748 183575.75 0.2775489762517623 -3 0.2061576843261718 8 Unmodified _YFHDATRVY_ chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;ENSG00000087586|ENST00000395915|AURKA 79.59630418116434 0.0176145593575188 4 Y{M(Oxidation (M))|F}HDATRVY 9 0 + 77.969 0.0 0.0 6.6609 6.6609 91.184 0.0 0.0 0.0 61.9550506248451 21.175748672893405 21.175748672893405 16.043031117331957 0 2.173877368056628 0.0 0.3807196863200844 0.6382104921644451 + + Y{M(Oxidation (M))|F}HDATRVY;Y{M(Oxidation (M))|F}HD{I|L}[WK]Y;Y{M(Oxidation (M))|F}HWTVVGY;Y{M(Oxidation (M))|F}H[VG]MVVGY;[TP]E[{M(Oxidation (M))|F}E]MRVY 6.6609;5.2904;4.5014;2.909;0.87663 +;-;-;-;- + 678 + 1 1.822 214579.0 0.8199999928474426 3299 4455 7748 HBL1_DMSO_200M_050219_2,7756 HBL1_DMSO_200M_050219_2,7756,YFHDATRVY True True YFHDATRVY 41.987372 586.280017077923 7917953.5 7748.0 chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;;ENSG00000087586|ENST00000395915|AURKA 6.779627799987793 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7757 42.001 800.0 167130.0 25 0 17011.0 + 6017 FVHPGAATV 9 127 449.6953336499297 897.3761143666594 2 449.6956054568291 MULTI CID FTMS 0 0 0 7748 190836.0 1.0 0 0.0 9 Unmodified _DSAMTSSTV_ ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 12.531546534597751 0.4974689918368763 4 V{M(Oxidation (M))|F} 2 8 34.991 0.0 0.0 3.8992 0.0 0.0 0.0 648.2321626925524 648.2321626925524 1.8196314394088944 0.0 0.0 0.0 0 0.1803115997617927 2.0 0.0 0.0 V{M(Oxidation (M))|F} 3.8992 - 213 + 1 1.822 104226.8 0.7799999713897705 3300 4455 7748 HBL1_DMSO_200M_050219_2,7757 HBL1_DMSO_200M_050219_2,7757,DSAMTSSTV False False FVHPGAATV 42.001187 449.695605456829 5842247.0 7748.0 ENSG00000183283|ENST00000412716|DAZAP2;;nc|ENSG00000183283|Q15038-2|DAZAP2;;nc|ENSG00000183283|Q15038-5|DAZAP2;;nc|ENSG00000183283|Q15038-6|DAZAP2 0.6900503734747568 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7758 42.015 800.0 188350.0 25 0 7647.5 + 39626 VDRQQQTL 8 185 494.26415458283833 0 494.2628356814384 PEAK CID FTMS 0 0 0 7748 125427.578125 0.5871579395474986 -1 0.08172607421875 10 Unmodified _VDRQQQTL_ REV__ENSG00000017260|ENST00000510168|ATP2C1;REV__nc|ENSG00000017260|P98194-2|ATP2C1;REV__nc|ENSG00000017260|P98194-3|ATP2C1;REV__nc|ENSG00000017260|P98194-4|ATP2C1;REV__nc|ENSG00000017260|P98194-5|ATP2C1;REV__nc|ENSG00000017260|P98194-6|ATP2C1;REV__nc|ENSG00000017260|P98194-7|ATP2C1;REV__nc|ENSG00000017260|P98194-8|ATP2C1;REV__nc|ENSG00000017260|P98194-9|ATP2C1 36.12702656103203 0.1753113530223663 4 TNGVNR 6 -1 36.552 0.0 0.0 3.7052 0.0 0.0 131.09280884080232 211.07280908756096 342.1656179283633 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.3807196863200844 0.2887254899964357 TNGVNR 3.7052 - 1214 + 1 1.822 114690.5 0.6800000071525574 3301 4455 7748 HBL1_DMSO_200M_050219_2,7758 HBL1_DMSO_200M_050219_2,7758,VDRQQQTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7760 42.019 20.0 1799500.0 25 0 169840.0 + 18520 KYQEVTNNL 9 75 554.7852653255493 1107.5559777178985 2 554.7855712771416 MULTI CID FTMS 0 0 0 7759 3197813.25 1.0 0 0.0 1 Unmodified _KYQEVTNNL_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 62.57269311338072 0.0246576765497938 4 DNTVEKC(Carbamidomethyl (C)){I|L} 8 7 67.147 0.0 0.0 6.0626 0.0 0.0 130.10583635363372 0.0 130.10583635363372 0.0 47.31421401685495 0.0 0.0 0 0.4247425010840047 0.0 1.1989700043360187 0.8494850021680094 DNTVEKC(Carbamidomethyl (C)){I|L} 6.0626 - 554 + 1 1.822 33662.3 1.0 3302 4456 7759 HBL1_DMSO_200M_050219_2,7760 HBL1_DMSO_200M_050219_2,7760,KYQEVTNNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7761 42.02 40.0 1029600.0 25 0 98986.0 + 3007 AVIREIQNA 9 71 507.29054525159694 1012.566537569994 2 507.2906982302666 MULTI CID FTMS 0 0 0 7759 1566032.625 0.8209869055709761 2 -0.1204147338867187 2 Unmodified _AVIREIQNA_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19762333-19763700:-|nuORF;ENST00000473243.5_1_19:19762333-19765368:-|nuORF;ENST00000491221.1_1_19:19762333-19764718:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 32.78568957990786 0.1150597335874693 4 {[VA]|[{I|L}G]}[R{I|L}]E{I|L}Q{[QG]|[NA]} 9 0 + 48.178 0.0 0.0 4.758 4.758 80.484 0.0 0.0 0.0 21.96780933001144 32.961434083857526 21.96780933001144 9.208187539523747 0 0.805462187404089 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}[R{I|L}]E{I|L}Q{[QG]|[NA]};{[VA]|[{I|L}G]}[R{I|L}]E{I|L}[AG]{[QG]|[NA]};{[VA]|[{I|L}G]}[R{I|L}]EA{[VA]|[{I|L}G]}{[QG]|[NA]};{[VA]|[{I|L}G]}[R{I|L}]EAN[Q{I|L}];{[VA]|[{I|L}G]}[R{I|L}][Q{I|L}]E{[QG]|[NA]};{[VA]|[{I|L}G]}[R{I|L}]EAGG[Q{I|L}] 4.758;3.8486;3.3774;3.3162;2.435;2.4068 +;-;-;-;-;- + 138 1 1.822 39281.8 1.0 3303 4456 7759 HBL1_DMSO_200M_050219_2,7761 HBL1_DMSO_200M_050219_2,7761,AVIREIQNA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7762 42.022 54.0 978220.0 25 0 279830.0 + 39444 VANTMRTSL 9 58 496.7635444839125 991.512536034625 2 496.7636291384697 MULTI CID FTMS 0 0 0 7759 993045.3125 0.1657403067207381 -3 0.2311935424804687 3 Unmodified _VANTMRTSL_ ENSG00000150753|ENST00000280326|CCT5;ENST00000508451.1_1_5:10250422-10254994:+|nuORF;ENST00000510326.5_1_5:10250452-10254343:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5 36.506200033944 0.094635877243972 4 VANTM 5 4 69.068 0.0 0.0 6.9659 0.0 0.0 0.0 472.2556246393188 472.2556246393188 57.07834387816234 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.4247425010840047 + VANTM 6.9659 + + 48 + 1 1.822 47046.5 1.0 3304 4456 7759 HBL1_DMSO_200M_050219_2,7762 HBL1_DMSO_200M_050219_2,7762,VANTMRTSL True True VANTMRTSL 42.021865 496.76362913847 86080568.0 7759.0 ENSG00000150753|ENST00000280326|CCT5;;ENST00000508451.1_1_5:10250422-10254994:+|nuORF;;nc|ENSG00000150753|P48643-2|CCT5;;ENST00000510326.5_1_5:10250452-10254343:+|nuORF 6.242908636728923 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7763 42.024 96.0 779420.0 25 0 130210.0 + 43144 VYPNFRPTPK 10 77 406.8925128875632 1217.6557092628896 3 406.8924438357353 MULTI CID FTMS 0 0 0 7759 639847.3125 0.6627637785151921 -1 0.0788803100585937 4 Unmodified _VYPNFRPTPK_ ENSG00000065518|ENST00000184266|NDUFB4;ENST00000418418.1_1_17:19743579-19743825:+|nuORF;ENST00000513465.1_1_4:43901008-43901365:+|nuORF;nc|ENSG00000065518|O95168-2|NDUFB4 44.94466952835103 0.1098215951422272 4 VYPN{M(Oxidation (M))|F}R[TP]PK 10 0 + 83.919 0.0 0.0 6.8919 6.8919 88.378 0.0 0.0 0.0 76.75250945692483 12.64136888583522 12.64136888583522 9.164539485499262 0 0.3807196863200844 2.0 1.325257498915995 0.3494850021680094 + + VYPN{M(Oxidation (M))|F}R[TP]PK;VYPGG{M(Oxidation (M))|F}R[TP]PK;[KP]M[K{I|L}]{M(Oxidation (M))|F}NP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KP]M[K{I|L}]{M(Oxidation (M))|F}GGP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KP]M[K{I|L}]DDK{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KP]M[K{I|L}]E[QT]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.8919;6.1393;2.0051;1.2525;0.62961;0.44741 +;-;-;-;-;- + 240 + 1 1.822 66009.2 1.0 3305 4456 7759 HBL1_DMSO_200M_050219_2,7763 HBL1_DMSO_200M_050219_2,7763,VYPNFRPTPK True True VYPNFRPTPK 42.023963 406.8932 16489839.375 7759.0 ENST00000513465.1_1_4:43901008-43901365:+|nuORF;;ENST00000418418.1_1_17:19743579-19743825:+|nuORF;;ENSG00000065518|ENST00000184266|NDUFB4;;nc|ENSG00000065518|O95168-2|NDUFB4 9.139660835266112 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7764 42.027 126.0 443810.0 25 0 54984.0 + 2030 APGPPGRER 9 80 468.7532287631016 935.4919045930033 2 468.7537414431572 MULTI CID FTMS 0 0 0 7759 351617.0 0.8161870431058408 -6 0.427825927734375 5 Unmodified _APGPPGRER_ REV__ENST00000427566.2_1_1:248100136-248100640:-|nuORF 14.838274106304384 0.4350285940865338 4 [QP]PP 4 -1 21.242 0.0 0.0 2.2707 0.0 0.0 0.0 513.2504549682562 513.2504549682562 6.020599913279625 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 [QP]PP 2.2707 - 189 1 1.822 49612.8 1.0 3306 4456 7759 HBL1_DMSO_200M_050219_2,7764 HBL1_DMSO_200M_050219_2,7764,APGPPGRER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7765 42.033 340.0 546820.0 25 0 73160.0 + 36441 SYYNSHDSL 9 155 543.2301379612808 1084.4457229893617 2 543.2302734255791 MULTI CID FTMS 0 0 0 7759 288379.28125 0.5203193296888967 -3 0.2311935424804687 6 Unmodified _SYYNSHDSL_ ENSG00000134242|ENST00000359785|PTPN22;ENST00000484147.5_1_1:114375712-114414257:-|nuORF;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;nc|ENSG00000134242|Q9Y2R2-6|PTPN22;nc|ENSG00000134242|Q9Y2R2|PTPN22 52.268347100219714 0.0353964759249114 4 [HD]SNYS{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 9 7 + 45.714 0.0 0.0 4.2155 4.2155 68.306 0.0 0.0 0.0 1.893204479383464 1.893204479383464 1.893204479383464 1.893204479383464 0 0.0 0.958607314841775 0.9247425010840048 1.1351518780601924 [HD]SNYS{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WN]|[YH]}NY[MT];[HS]DNYS{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HS]NYDS{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HS]NDYS{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[ES]|[DT]|[{I|L}C]}[TP]Y[MT];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WN]|[YH]}GGY[MT];{[{M(Oxidation (M))|F}C]|[YS]}YNS[HD]S{I|L};{[{M(Oxidation (M))|F}C]|[YS]}YNS[HS]D{I|L};[HM]{I|L}SY{[QC]|[C(Carbamidomethyl (C))A]}{[CT]|[{M(Oxidation (M))|F}G]} 4.2155;4.0409;3.7984;3.543;3.3584;3.212;3.1868;2.9557;2.7765;2.7415 -;-;-;-;-;-;-;+;-;- + 774 1 1.822 142147.9 1.0 3307 4456 7759 HBL1_DMSO_200M_050219_2,7765 HBL1_DMSO_200M_050219_2,7765,SYYNSHDSL True True SYYNSHDSL 42.032701 543.230273425579 8108314.0 7759.0 ENSG00000134242|ENST00000359785|PTPN22;;nc|ENSG00000134242|Q9Y2R2-6|PTPN22;;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;;nc|ENSG00000134242|Q9Y2R2|PTPN22;;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;;ENST00000484147.5_1_1:114375712-114414257:-|nuORF 6.386392593383789 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7766 42.047 800.0 172960.0 25 0 8651.1 -1 QVPDEMPLN 9 183 529.7466720943171 1057.478791255434 2 529.7513915896416 MULTI CID FTMS 0 0 0 -1 0 7 Oxidation (M) _QVPDEM(Oxidation (M))PLN_ ENST00000389301.7_1_16:89809334-89813290:-|nuORF;ENST00000568983.5_1_16:89811297-89813082:-|nuORF 32.30548876998284 0.1201446275138228 4 [QP][EP]P{I|L}GC{[MS]|[{M(Oxidation (M))|F}A]} 10 -1 + 40.906 0.0 0.0 3.8683 3.8683 73.794 0.0 0.0 0.0 4.610291840710161 26.401820422943395 4.610291840710161 6.409080081077981 0 0.3807196863200844 0.7958800173440752 1.055462187404089 0.4482935309920375 [QP][EP]P{I|L}GC{[MS]|[{M(Oxidation (M))|F}A]};[QP][EP]P{I|L}C(Carbamidomethyl (C)){[MS]|[{M(Oxidation (M))|F}A]};{[QD]|[EN]|[WG]|[KD]|[RS]}V[YR]GC{[MS]|[{M(Oxidation (M))|F}A]};[AG]P[EP]P{I|L}GC{[MS]|[{M(Oxidation (M))|F}A]};{I|L}[QT]QN[KC][HS];{I|L}[DN]QN[KC][HS];{[DA]|[EG]}[HK]P{I|L}GC{[MS]|[{M(Oxidation (M))|F}A]};[AG]P[EP]P{I|L}C(Carbamidomethyl (C)){[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}[HN]P{I|L}GC{[MS]|[{M(Oxidation (M))|F}A]};{I|L}[DN]Q[TP]{M(Oxidation (M))|F}[HS] 3.8683;3.2622;2.8133;2.811;2.7092;2.7092;2.6156;2.4738;2.435;2.4245 -;-;-;-;-;-;-;-;-;- 2087 1 1.822 114013.4 0.7599999904632568 3308 4456 7759 HBL1_DMSO_200M_050219_2,7766 HBL1_DMSO_200M_050219_2,7766,QVPDEMPLN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7767 42.053 382.0 99133.0 25 0 13968.0 + -1 DCVYCWVSW 9 72 637.7544175389877 1273.4942821447753 2 637.7556640505791 MULTI CID FTMS 0 0 0 7759 152269.390625 0.6638505431110026 -3 0.2311935424804687 8 2 Carbamidomethyl (C) _DC(Carbamidomethyl (C))VYC(Carbamidomethyl (C))WVSW_ REV__ENSG00000156256|ENST00000399976|USP16;REV__ENST00000474835.5_1_21:30400234-30414894:+|nuORF;REV__nc|ENSG00000156256|Q9Y5T5-2|USP16;REV__nc|ENSG00000156256|Q9Y5T5-3|USP16;REV__nc|ENSG00000156256|Q9Y5T5-5|USP16 7.289230182591677 0.6602208344931196 4 [YV]Q 3 -1 29.309 0.0 0.0 2.3015 0.0 0.0 0.0 880.2824650883878 880.2824650883878 14.61635608164464 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [YV]Q 2.3015 - 72 1 1.822 36264.1 1.0 3309 4456 7759 HBL1_DMSO_200M_050219_2,7767 HBL1_DMSO_200M_050219_2,7767,DCVYCWVSW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7768 42.062 467.0 247490.0 25 0 20567.0 + 34766 SQAPPMHSL 9 139 484.2371093434816 966.4596657537631 2 484.2366210818291 MULTI CID FTMS 0 0 0 7759 136439.3125 0.731519983164876 -3 0.2311935424804687 9 Unmodified _SQAPPMHSL_ ENSG00000077063|ENST00000160373|CTTNBP2 34.40172386719151 0.1061884637610825 4 {[QS]|[NT]}AP{NN|[MP]|[D{I|L}]|[EV]}HS{I|L} 9 0 + 36.468 0.0 0.0 3.7733 3.7733 66.94 0.0 0.0 0.0 4.979537049754072 1.7045199427879467 1.7045199427879467 1.9312459835446203 0 1.0 0.6575773191777937 0.7302046884880937 0.0 + + {[QS]|[NT]}AP{NN|[MP]|[D{I|L}]|[EV]}HS{I|L};{[QS]|[NT]}AP{NN|[MP]|[D{I|L}]|[EV]}HTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PMR{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{[QS]|[NT]}A{[QS]|[NT]}[RH]GP;{[QS]|[NT]}{M(Oxidation (M))|F}[KQ]{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{[VA]|[{I|L}G]}AN{NN|[MP]|[D{I|L}]|[EV]}P[HM];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[KQ]{I|L}{[C(Carbamidomethyl (C))G]|[NC]};[Q{I|L}]N{NN|[MP]|[D{I|L}]|[EV]}P[HM];{[QS]|[NT]}A[{M(Oxidation (M))|F}V][YV]GP;{[VA]|[{I|L}G]}GQ{NN|[MP]|[D{I|L}]|[EV]}P[HM] 3.7733;3.5735;2.5414;2.0439;1.8546;1.6773;1.5067;1.4792;1.46;1.3658 +;-;-;-;-;-;-;-;-;- + 796 + 1 1.822 89426.5 1.0 3310 4456 7759 HBL1_DMSO_200M_050219_2,7768 HBL1_DMSO_200M_050219_2,7768,SQAPPMHSL True True SQAPPMHSL 42.061667 484.236621081829 2426921.0 7759.0 ENSG00000077063|ENST00000160373|CTTNBP2 5.861716111501058 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7770 42.066 20.0 2463700.0 25 0 155840.0 + 38882 TVKKTFFEDV 10 52 405.2193556320232 1212.6362374962696 3 405.2194702029228 MULTI CID FTMS 0 0 0 7769 2670853.75 0.1581809152182045 4 -0.2260627746582031 1 Unmodified _TVKKTFFEDV_ REV__ENSG00000079691|ENST00000329474|CARMIL1;REV__nc|ENSG00000079691|Q5VZK9-2|CARMIL1 8.745405648335112 0.6861838735306406 4 [{M(Oxidation (M))|F}V]D{I|L} 4 -1 26.198 0.0 0.0 2.1604 0.0 0.0 0.0 735.3850824524663 735.3850824524663 2.6979531151190628 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{M(Oxidation (M))|F}V]D{I|L} 2.1604 - 22 + 1 1.822 44355.8 1.0 3311 4457 7769 HBL1_DMSO_200M_050219_2,7770 HBL1_DMSO_200M_050219_2,7770,TVKKTFFEDV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7771 42.068 99.0 652490.0 25 0 76238.0 + 43667 YARQGQIEV 9 97 532.2807022178657 1062.5468515025314 2 532.2800170779228 MULTI CID FTMS 0 0 0 7769 612377.8125 0.1441679350090755 4 -0.2260627746582031 2 Unmodified _YARQGQIEV_ ENSG00000064393|ENST00000406875|HIPK2;ENSG00000110422|ENST00000303296|HIPK3;ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2;nc|ENSG00000110422|Q9H422-2|HIPK3;nc|ENSG00000163349|Q86Z02-2|HIPK1 52.268347100219714 0.0353964759249114 4 Q{I|L}EV 4 5 38.047 0.0 0.0 3.5808 0.0 0.0 575.28325087715 0.0 575.28325087715 0.0 29.095019080956064 0.0 0.0 0 0.5866968715561641 0.0 0.0 0.6747425010840047 + Q{I|L}EV 3.5808 + + 273 1 1.822 53404.4 1.0 3312 4457 7769 HBL1_DMSO_200M_050219_2,7771 HBL1_DMSO_200M_050219_2,7771,YARQGQIEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7772 42.069 54.0 1235900.0 25 0 765440.0 -1 0 53 481.2605534849676 480.2532770183676 1 481.2614929080009 MULTI CID FTMS 0 0 0 7769 1498006.625 0.7215056933615569 -4 0.2777900695800781 3 4 V 1 -1 10.596 0.0 0.0 2.2063 0.0 0.0 363.1738911924871 0.0 363.1738911924871 0.0 7.101082016915949 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.2063 - 2 + 1 1.822 60461.9 1.0 3313 4457 7769 HBL1_DMSO_200M_050219_2,7772 HBL1_DMSO_200M_050219_2,7772, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7773 42.073 174.0 457980.0 25 0 91539.0 + 2630 ASVPKVETV 9 80 465.26844440862754 928.5223358840552 2 465.2683288455009 MULTI CID FTMS 0 0 0 7769 572623.875 0.0603717308663277 -20 0.8782920837402344 4 Unmodified _ASVPKVETV_ ENSG00000100664|ENST00000216554|EIF5 41.8396318013385 0.0653578398400075 4 {[SA]|[TG]}VPK{NN|[MP]|[D{I|L}]|[EV]}TV 9 0 + 47.735 0.0 0.0 5.141 5.141 79.32 0.0 0.0 0.0 18.11674284527307 6.989700043360188 6.989700043360188 6.989700043360188 0 0.4247425010840047 1.0969100130080565 0.9876954943324544 0.0 + + {[SA]|[TG]}VPK{NN|[MP]|[D{I|L}]|[EV]}TV;{[SA]|[TG]}VPK{NN|[MP]|[D{I|L}]|[EV]}S{I|L};[KP]VETV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}E[KP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}[PS]{[VA]|[{I|L}G]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}EV[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.141;4.3882;2.9264;2.1185;1.5496;0.79833 +;-;-;-;-;- + 212 + 1 1.822 65068.4 1.0 3314 4457 7769 HBL1_DMSO_200M_050219_2,7773 HBL1_DMSO_200M_050219_2,7773,ASVPKVETV True True ASVPKVETV 42.072805 465.268328845501 220850720.0 7769.0 ENSG00000100664|ENST00000216554|EIF5 6.282391866048177 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7774 42.075 128.0 517870.0 25 0 61792.0 + 24858 MPMGPGHASV 10 105 492.2255174155769 982.436481897954 2 492.2254821658134 MULTI CID FTMS 0 0 0 7769 405455.96875 0.3517339307965329 -3 0.2072029113769531 5 Unmodified _MPMGPGHASV_ ENSG00000161021|ENST00000292599|MAML1 49.93300154707207 0.0805441195901191 4 MPMGPG[HA]SV 10 0 + 65.246 0.0 0.0 6.6412 6.6412 82.533 0.0 0.0 0.0 49.21504865789996 1.6644170265800966 1.6644170265800966 4.503187623076961 0 1.385151878060192 2.0 0.3494850021680094 0.0 + + MPMGPG[HA]SV;MPMGP[HQ]SV;MPM[NP][HA]SV;MV{M(Oxidation (M))|F}NRMSV;[{M(Oxidation (M))|F}T]SPM{[QS]|[NT]}SV;[{M(Oxidation (M))|F}T]PSM{[QS]|[NT]}SV 6.6412;6.1829;4.9825;3.2103;0.87917;0.57276 +;-;-;-;-;- + 441 + 1 1.822 52969.7 1.0 3315 4457 7769 HBL1_DMSO_200M_050219_2,7774 HBL1_DMSO_200M_050219_2,7774,MPMGPGHASV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7775 42.078 112.0 551170.0 25 0 41964.0 + 30839 RILDESHSI 9 93 535.2859439160858 0 535.2859985232353 PEAK CID FTMS 0 0 0 7769 399512.21875 0.5376798863571939 -1 0.0465965270996093 6 Unmodified _RILDESHSI_ ENSG00000100888|ENST00000646647|CHD8;ENST00000554384.1_1_14:21876861-21881122:-|nuORF;nc|ENSG00000100888|Q9HCK8-2|CHD8 29.84058131909904 0.1118629134628069 4 SHSE 4 6 42.053 0.0 0.0 3.9355 0.0 0.0 131.09451858966673 494.2736137170924 625.3681323067591 0.0 0.0 0.0 0.0 0 1.2059771852360797 0.0 0.805462187404089 0.0 SHSE 3.9355 - 138 + 1 1.822 50308.9 1.0 3316 4457 7769 HBL1_DMSO_200M_050219_2,7775 HBL1_DMSO_200M_050219_2,7775,RILDESHSI True True RILDESHSI 42.077767 535.285998523235 4612509.0 7769.0 ENST00000554384.1_1_14:21876861-21881122:-|nuORF;;nc|ENSG00000100888|Q9HCK8-2|CHD8;;ENSG00000100888|ENST00000646647|CHD8 1.643299624323845 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7776 42.09 680.0 167920.0 25 0 18219.0 29257 QHFHALCHSL 10 113 596.7899741056209 1191.5653952780417 2 596.7962524294853 MULTI CID FTMS 0 0 0 7769 307867.28125 0.5225885160469251 7 -0.2977561950683594 7 Unmodified _QHFHALCHSL_ ENSG00000159374|ENST00000421985|M1AP;ENST00000464686.5_1_2:74785845-74804048:-|nuORF;nc|ENSG00000159374|Q8TC57-2|M1AP;nc|ENSG00000159374|Q8TC57-3|M1AP;nc|ENSG00000159374|Q8TC57-4|M1AP 14.838274106304384 0.5985701837916485 4 [HS]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}AQTV 9 7 33.368 0.0 0.0 2.8003 0.0 0.0 0.0 218.05878269104176 218.05878269104176 21.087353034733034 0.0 0.0 0.0 0 0.0 0.0 1.7302046884880935 0.0 [HS]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}AQTV 2.8003 - 661 1 1.822 86518.7 1.0 3317 4457 7769 HBL1_DMSO_200M_050219_2,7776 HBL1_DMSO_200M_050219_2,7776,QHFHALCHSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7777 42.103 800.0 217250.0 25 0 25290.0 + 43146 VYPNFRPTPK 10 116 609.8353370935628 1217.6561212539254 2 609.8353759646416 MULTI CID FTMS 0 0 0 7769 187056.453125 1.0 0 0.0 8 Unmodified _VYPNFRPTPK_ ENSG00000065518|ENST00000184266|NDUFB4;ENST00000418418.1_1_17:19743579-19743825:+|nuORF;ENST00000513465.1_1_4:43901008-43901365:+|nuORF;nc|ENSG00000065518|O95168-2|NDUFB4 55.46699784157472 0.0484770532980821 4 VYPN{M(Oxidation (M))|F}R[TP]PK 10 0 + 78.537 0.0 0.0 6.4498 6.4498 86.718 0.0 0.0 0.0 53.75532642444085 11.325161711962323 11.325161711962323 9.164539485499262 0 0.7302046884880937 2.0 1.0189301784845295 0.6747425010840047 + + VYPN{M(Oxidation (M))|F}R[TP]PK;VYPGG{M(Oxidation (M))|F}R[TP]PK;VYPN[RK][WQ]K;[KP]M[K{I|L}]{M(Oxidation (M))|F}NP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{M(Oxidation (M))|F}R[TP][YV]PK;[KP]M[K{I|L}]{M(Oxidation (M))|F}GGP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KP]M[K{I|L}]DDK{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.4498;5.6972;4.1525;1.7402;1.0239;0.98755;0.79633 +;-;-;-;-;-;- + 290 + 1 1.822 133320.7 0.9200000166893004 3318 4457 7769 HBL1_DMSO_200M_050219_2,7777 HBL1_DMSO_200M_050219_2,7777,VYPNFRPTPK True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7778 42.113 546.0 349580.0 25 0 12166.0 -1 MPHSIMRI 8 220 334.1742241027546 999.5008429084636 3 334.1738464236259 MULTI CID FTMS 0 0 0 7769 141258.703125 1.0 0 0.0 9 Oxidation (M) _MPHSIM(Oxidation (M))RI_ ENSG00000138107|ENST00000369905|ACTR1A;ENST00000480947.1_1_10:104243895-104247966:-|nuORF 11.494710602746466 0.7411008738235387 4 MPHS 4 -1 35.745 0.0 0.0 3.5763 0.0 0.0 0.0 544.2908419244749 544.2908419244749 14.80327215271494 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 MPHS 3.5763 + + 141 + 1 1.822 150227.9 1.0 3319 4457 7769 HBL1_DMSO_200M_050219_2,7778 HBL1_DMSO_200M_050219_2,7778,MPHSIMRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7779 42.127 800.0 171290.0 25 0 12044.0 + + -1 APFQSMQTV 9 172 513.2171555276142 1024.4197581220285 2 513.2177612185478 MULTI CID FTMS 0 0 0 7769 109449.4375 0.0041512331596368 36 -1.213092803955078 10 Carbamidomethyl (C),Oxidation (M) _GVEVSM(Oxidation (M))C(Carbamidomethyl (C))DL_ nc|ENSG00000135387|Q14444-2|CAPRIN1;ENSG00000135387|ENST00000341394|CAPRIN1 16.942295170755138 0.3780752226737986 4 {[DA]|[EG]}V{I|L}D 5 -1 30.674 0.0 0.0 2.9943 0.0 0.0 0.0 508.15758706173455 508.15758706173455 14.95567808259892 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.2742275032520141 0.0 {[DA]|[EG]}V{I|L}D 2.9943 - 625 1 1.822 106835.7 0.7400000095367432 3320 4457 7769 HBL1_DMSO_200M_050219_2,7779 HBL1_DMSO_200M_050219_2,7779,GVEVSMCDL False False APFQSMQTV 42.126863 513.217761218548 1200846.125 7769.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 3.836358070373535 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7780 42.136 492.0 321250.0 25 0 15784.0 11460 GIFLAIILF 9 195 336.2164446513235 0 336.5068847537041 PEAK CID FTMS 0 0 0 7769 21185.65625 0.7210978020823777 2 -0.1353340148925781 11 Unmodified _GIFLAIILF_ ENSG00000164713|ENST00000297290|BRI3;ENST00000456357.6_1_7:97881701-97920552:+|nuORF;ENST00000473967.1_1_7:97912317-97920552:+|nuORF 9.347437153973935 0.3197567915069932 4 D 1 9 6.9897 0.0 0.0 1.0426 0.0 0.0 98.0938867618283 454.2781466119751 552.3720333738033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 1.0426 - 26 + 1 1.822 129713.1 1.0 3321 4457 7769 HBL1_DMSO_200M_050219_2,7780 HBL1_DMSO_200M_050219_2,7780,GIFLAIILF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7782 42.14 2.2 23795000.0 25 0 3733900.0 + 2188 AQAPDLQRV 9 66 499.2749073758181 996.5352618184362 2 499.2750121951103 MULTI CID FTMS 0 0 0 7781 30368800.0 0.643653277047371 -2 0.1204147338867187 1 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 32.78568957990786 0.1150597335874693 4 [QA]APD{I|L} 6 3 45.15 0.0 0.0 4.5307 0.0 0.0 0.0 398.2163790338501 398.2163790338501 30.546218740408904 0.0 0.0 0.0 0 1.0 0.8239087409443188 0.0 0.0 + [QA]APD{I|L} 4.5307 + + 28 + 1 1.813 49316.3 1.0 3322 4458 7781 HBL1_DMSO_200M_050219_2,7782 HBL1_DMSO_200M_050219_2,7782,AQAPDLQRV True True AQAPDLQRV 42.139721 499.27501219511 1839446784.0 7781.0 ENSG00000111641|ENST00000322166|NOP2;;nc|ENSG00000111641|P46087-4|NOP2;;nc|ENSG00000111641|P46087-2|NOP2;;nc|ENSG00000111641|P46087-3|NOP2 8.9628054300944 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7783 42.141 2.8 14270000.0 25 0 1773400.0 + 24982 MPPPPPQGV 9 63 460.23852327962805 918.462493626056 2 460.7396118044853 MULTI CID FTMS 0 0 0 7781 8861778.0 0.9635376351767242 1 -0.0615158081054687 2 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 34.18733598223924 0.1073653526364521 4 {[HG]|PP}MPP 5 5 19.45 0.0 0.0 2.1177 0.0 0.0 0.0 396.18822526033983 396.18822526033983 7.231975075880328 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {[HG]|PP}MPP 2.1177 - 36 1 1.813 37904.3 1.0 3323 4458 7781 HBL1_DMSO_200M_050219_2,7783 HBL1_DMSO_200M_050219_2,7783,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7784 42.142 50.0 1122300.0 25 0 197300.0 + 15368 IPNEKIRNI 9 73 366.2207244973479 1095.6403440922436 3 366.2200805544853 MULTI CID FTMS 0 0 0 7781 1062084.5 0.3298164765468913 5 -0.192718505859375 3 Unmodified _IPNEKIRNI_ ENSG00000168827|ENST00000486715|GFM1;nc|ENSG00000168827|Q96RP9-2|GFM1 21.53697664764585 0.2571576504437394 4 {I|L}PNEK{I|L}V{[{M(Oxidation (M))|F}H]|[RQ]} 9 3 + 65.367 0.0 0.0 5.9661 5.9661 82.795 0.0 0.0 0.0 43.31546893236258 7.147642715192504 7.147642715192504 6.989700043360188 0 0.0 0.0 0.4247425010840047 0.3494850021680094 {I|L}PNEK{I|L}V{[{M(Oxidation (M))|F}H]|[RQ]};{I|L}PNE{I|L}KV{[{M(Oxidation (M))|F}H]|[RQ]};{I|L}PGGEK{I|L}V{[{M(Oxidation (M))|F}H]|[RQ]};{I|L}PGGE{I|L}KV{[{M(Oxidation (M))|F}H]|[RQ]} 5.9661;5.3281;5.1256;4.4877 -;-;-;- 80 + 1 1.813 55599.2 1.0 3324 4458 7781 HBL1_DMSO_200M_050219_2,7784 HBL1_DMSO_200M_050219_2,7784,IPNEKIRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7785 42.144 59.0 1189400.0 25 0 381220.0 -1 0 71 360.1949457833196 359.1876693167196 1 360.1948730349541 MULTI CID FTMS 0 0 0 7781 975591.6875 0.6608100359855312 6 -0.22393798828125 4 4 MP{I|L} 3 -1 + 50.974 0.0 0.0 14.192 14.192 99.161 0.0 0.0 0.0 45.48963451112506 12.21848749616356 12.21848749616356 41.308422131034845 0 0.3807196863200844 1.6989700043360187 0.0 0.0 MP{I|L};[{I|L}P]M 14.192;2.691 -;- 12 + 1 1.813 64023.7 1.0 3325 4458 7781 HBL1_DMSO_200M_050219_2,7785 HBL1_DMSO_200M_050219_2,7785, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7786 42.145 58.0 812090.0 25 0 62709.0 + 26266 NQMPTQPQV 9 78 521.7523614149425 1041.4901698966848 2 521.7527953982353 MULTI CID FTMS 0 0 0 7781 968811.0625 0.4742060699935438 3 -0.1522445678710937 5 Unmodified _NQMPTQPQV_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 32.30548876998284 0.1201446275138228 4 PQV 3 6 17.577 0.0 0.0 1.6877 0.0 0.0 699.299055302817 0.0 699.299055302817 0.0 1.3225542734493343 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.7302046884880937 + PQV 1.6877 + + 53 + 1 1.813 40637.0 1.0 3326 4458 7781 HBL1_DMSO_200M_050219_2,7786 HBL1_DMSO_200M_050219_2,7786,NQMPTQPQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7787 42.147 63.0 691490.0 25 0 79607.0 -1 MPPPPPQGV 9 83 468.2364995746263 0 468.2367126345634 PEAK CID FTMS 0 0 0 7781 517845.28125 0.6481483335741408 -1 0.0738182067871093 6 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 32.116972079565 0.1004713836468113 4 PP 2 -1 13.954 0.0 0.0 1.4932 0.0 0.0 399.2102884719919 338.1199740045532 737.330262476545 0.0 0.0 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.0 PP 1.4932 + + 79 + 1 1.813 37242.8 1.0 3327 4458 7781 HBL1_DMSO_200M_050219_2,7787 HBL1_DMSO_200M_050219_2,7787,MPPPPPQGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7788 42.15 142.0 548110.0 25 0 55396.0 + 6674 EAYLGKTV 8 87 440.742217740185 879.4698825471701 2 440.7421752810478 MULTI CID FTMS 0 0 0 7781 371518.625 0.0809569095491895 -8 0.5482406616210938 7 Unmodified _EAYLGKTV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 54.773552608820026 0.1167943196628344 4 {[CP]|[EA]}Y{I|L}GKTV 8 0 {[CP]|[EA]}Y + + 26.23 9.0977 2.5053 2.9825 2.9825 45.876 0.0 0.0 0.0 0.0 -2.68149360313571 -2.68149360313571 0.0 0 0.2887254899964357 0.0 1.0994850021680094 0.0 + + {[CP]|[EA]}Y{I|L}GKTV 2.9825 + + 314 + 1 1.813 63829.6 1.0 3328 4458 7781 HBL1_DMSO_200M_050219_2,7788 HBL1_DMSO_200M_050219_2,7788,EAYLGKTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7789 42.161 648.0 191330.0 25 0 27610.0 -1 VEQMFETFDFN 11 126 711.7990622814344 1421.5835716296688 2 711.7998535037041 MULTI CID FTMS 0 0 0 7781 322519.625 0.1344478661139146 6 -0.22393798828125 8 Oxidation (M) _VEQM(Oxidation (M))FETFDFN_ ENSG00000048545|ENST00000372958|GUCA1A 20.41453444215458 0.6105011870913812 4 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y 13 -1 + 134.25 0.0 0.0 9.4438 9.4438 86.866 0.0 0.0 0.0 8.910545338787557 16.642078980768062 8.910545338787557 3.631779024128264 0 1.6382104921644451 1.3010299956639813 2.360924374808178 1.5044321917401078 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAGAQDA{M(Oxidation (M))|F}Y;[AG]AHDEAQQDA{M(Oxidation (M))|F}Y;[AG]AHDEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGA[AG]DA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEQAQDA{M(Oxidation (M))|F}Y;[AG]ADHEAQQDA{M(Oxidation (M))|F}Y;[AG]ADHEAGAQDA{M(Oxidation (M))|F}Y 9.4438;9.1883;8.9709;8.9604;8.8169;8.8064;8.8056;8.7477;8.7209;8.7104 -;-;-;-;-;-;-;-;-;- 21719 1 1.813 89127.8 1.0 3329 4458 7781 HBL1_DMSO_200M_050219_2,7789 HBL1_DMSO_200M_050219_2,7789,VEQMFETFDFN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7790 42.173 712.0 442750.0 25 0 27890.0 30429 RDACSVSLPC 10 249 350.82834647680926 1049.4632100306278 3 350.8285400271416 MULTI CID FTMS 0 0 0 7781 314977.40625 0.1844312500768518 -5 0.3516082763671875 9 Unmodified _RDACSVSLPC_ ENST00000598558.5_1_19:41083239-41086365:+|nuORF 10.823927491677226 0.6659270209832991 4 V 1 9 14.604 0.0 0.0 1.3916 0.0 0.0 932.3835571759388 0.0 932.3835571759388 0.0 2.4113561651978426 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.3916 + + 1874 + 1 1.813 258308.6 1.0 3330 4458 7781 HBL1_DMSO_200M_050219_2,7790 HBL1_DMSO_200M_050219_2,7790,RDACSVSLPC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7791 42.184 633.0 392500.0 25 0 12676.0 -1 GADVARMWE 9 204 525.7380710961268 1049.4615892590534 2 525.7388793826103 MULTI CID FTMS 0 0 0 7781 317098.0625 0.2207828631486015 -6 0.4054527282714844 10 Oxidation (M) _GADVARM(Oxidation (M))WE_ ENSG00000184304|ENST00000331968|PRKD1 17.11289562659939 0.3734572693229295 4 [DG]APRT{I|L} 7 -1 30.793 0.0 0.0 2.9342 0.0 0.0 0.0 336.0645153937864 336.0645153937864 4.590153894181558 0.0 0.0 0.0 0 1.524227503252014 1.3010299956639813 0.2742275032520141 0.0 [DG]APRT{I|L} 2.9342 - 2476 1 1.813 192974.9 1.0 3331 4458 7781 HBL1_DMSO_200M_050219_2,7791 HBL1_DMSO_200M_050219_2,7791,GADVARMWE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7792 42.197 742.0 156030.0 25 0 49706.0 + 5816 DPRHGRYLTV 10 90 607.3254071765065 1212.6362614198129 2 607.3258544802666 MULTI CID FTMS 0 0 0 7781 204455.78125 0.0767095843936334 5 -0.192718505859375 11 Unmodified _DPRHGRYLTV_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000454403.1_1_13:41958968-41959286:-|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3 8.745405648335112 0.6861838735306406 4 DV 2 8 20.969 0.0 0.0 1.7292 0.0 0.0 0.0 995.5207903859388 995.5207903859388 11.054266826574466 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV 1.7292 - 30 + 1 1.813 87757.2 1.0 3332 4458 7781 HBL1_DMSO_200M_050219_2,7792 HBL1_DMSO_200M_050219_2,7792,DPRHGRYLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7794 42.201 58.0 1286100.0 25 0 142530.0 + 43224 WAPIRDGASI 10 78 362.5294940101128 1084.5666526305386 3 362.5293151736259 MULTI CID FTMS 0 0 0 7793 1168088.75 0.3858307009049982 -28 1.1680450439453125 1 Unmodified _WAPIRDGASI_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 17.11289562659939 0.5604042439455784 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 5 -1 45.362 0.0 0.0 4.1825 0.0 0.0 0.0 485.2471102350219 485.2471102350219 33.595756168365014 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.7302046884880937 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 4.1825 - 100 + 1 1.813 71830.9 1.0 3333 4459 7793 HBL1_DMSO_200M_050219_2,7794 HBL1_DMSO_200M_050219_2,7794,WAPIRDGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7795 42.215 800.0 57436.0 25 0 4738.2 + -1 NSGDVNVEIN 10 56 1060.502246081829 0 1060.502246081829 PEAK CID FTMS 0 0 0 -1 0 2 ENSG00000171403|ENST00000246662|KRT9;P35527 4 D{I|L}EVNV 6 -1 50.17 0.0 0.0 2.3676 0.0 0.0 1076.5219959704957 370.10126672916255 1446.6232626996582 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 1.774227503252014 D{I|L}EVNV 2.3676 - 495 + 1 1.813 36610.8 0.6499999761581421 3334 4459 7793 HBL1_DMSO_200M_050219_2,7795 HBL1_DMSO_200M_050219_2,7795, False False NSGDVNVEIN 42.215102 1060.50224608183 234320.078125 7793.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 6.756288051605225 1.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7796 42.218 119.0 912570.0 25 0 92432.0 + 24151 LYQPRASEM 9 91 547.7683434665378 1093.5221339998757 2 547.7687255740166 MULTI CID FTMS 0 0 0 7793 980410.25 0.5373599004162591 -5 0.3425369262695312 3 Unmodified _LYQPRASEM_ ENSG00000168081|ENST00000301908|PNOC;nc|ENSG00000168081|Q13519-2|PNOC 62.57269311338072 0.0246576765497938 4 {I|L}YQMGP{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 9 6 + 71.281 0.0 0.0 6.5185 6.5185 74.121 0.0 0.0 0.0 41.35467746634737 7.7936148139174435 7.7936148139174435 0.16691467821299 0 0.7429928190999391 2.0 1.1382104921644451 0.3807196863200844 {I|L}YQMGP{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{I|L}YQPGM{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{I|L}Y[AG]MGP{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{I|L}Y[AG]PGM{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[Y{I|L}]Q[YT][Y{I|L}]M;[Y{I|L}][YT]Q[Y{I|L}]M;[Y{I|L}][KS]C(Carbamidomethyl (C))[RH]M;{I|L}Y{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}H]|[RQ]}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{I|L}Y[YN][Y{I|L}][{M(Oxidation (M))|F}V];[Y{I|L}][YT]ME{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 6.5185;6.5032;5.3283;5.313;4.2915;3.8786;3.6069;3.6044;3.216;2.9238 -;-;-;-;-;-;-;-;-;- 415 + 1 1.813 86827.4 1.0 3335 4459 7793 HBL1_DMSO_200M_050219_2,7796 HBL1_DMSO_200M_050219_2,7796,LYQPRASEM True True LYQPRASEM 42.217587 547.768725574017 46193511.0 7793.0 nc|ENSG00000168081|Q13519-2|PNOC;;ENSG00000168081|ENST00000301908|PNOC 7.214627742767334 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7797 42.219 52.0 784830.0 25 0 63723.0 + 17779 KQIDVYRSV 9 68 554.311395482548 1106.608238031896 2 554.3116332888603 MULTI CID FTMS 0 0 0 7793 696185.75 0.9132568597331012 -1 0.0615158081054687 4 Unmodified _KQIDVYRSV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 10.799506525563784 0.5443532743200366 4 KQ{I|L}D[RN]{I|L} 7 4 40.731 0.0 0.0 3.6807 0.0 0.0 0.0 236.10442529849848 236.10442529849848 29.89400181131284 0.0 0.0 0.0 0 0.1747425010840047 0.0 0.0 0.4247425010840047 KQ{I|L}D[RN]{I|L} 3.6807 - 64 + 1 1.813 35823.0 1.0 3336 4459 7793 HBL1_DMSO_200M_050219_2,7797 HBL1_DMSO_200M_050219_2,7797,KQIDVYRSV False True KQIDVYRSV 42.218948 554.31163328886 5180780.0 7793.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 1.701098695397377 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7798 42.232 782.0 243610.0 25 0 13695.0 + 30679 RFPEHVREI 9 167 394.8834829426876 1181.6286194282627 3 394.8844177126884 MULTI CID FTMS 0 0 0 7793 228270.40625 0.7307502195105872 1 -0.0535163879394531 5 Unmodified _RFPEHVREI_ ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR 72.58957779350692 0.0200979202038191 4 {I|L}MREHVRE{I|L} 9 3 + 68.993 0.0 0.0 5.8388 5.8388 86.383 0.0 0.0 0.0 18.83294675480037 10.133904811810304 10.133904811810304 10.133904811810304 0 2.103917193908117 1.3010299956639813 1.1549471895720984 0.2302046884880938 {I|L}MREHVRE{I|L};{I|L}MREHV{I|L}WV;{I|L}MREH{I|L}[RD]{I|L};{I|L}E{[WT]|[RM]}HVRE{I|L};{I|L}MREH{I|L}VWV;{I|L}MRE{I|L}H[RD]{I|L};[R{M(Oxidation (M))|F}]PEHVRE{I|L};{I|L}E{[WT]|[RM]}HV{I|L}WV;{I|L}E{[WT]|[RM]}H{I|L}[RD]{I|L};{I|L}MRE{I|L}HVWV 5.8388;4.9812;4.9468;4.8652;4.5533;4.3325;4.245;4.0076;3.9731;3.9391 -;-;-;-;-;-;+;-;-;- + 1058 + 1 1.813 154526.0 1.0 3337 4459 7793 HBL1_DMSO_200M_050219_2,7798 HBL1_DMSO_200M_050219_2,7798,RFPEHVREI True True RFPEHVREI 42.232464 394.884417712688 12425470.0 7793.0 nc|ENSG00000175054|Q13535-3|ATR;;nc|ENSG00000175054|Q13535-2|ATR;;ENSG00000175054|ENST00000350721|ATR 4.841275612513225 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7799 42.246 777.0 188680.0 25 0 32850.0 11 AAAEWRRRRRQ 11 85 728.4105124962421 1454.806472059284 2 728.4117309451103 MULTI CID FTMS 0 0 0 7793 209097.28125 1.0 0 0.0 6 Unmodified _AAAEWRRRRRQ_ ENST00000554273.1_1_14:50998776-50999365:-|nuORF 2.282774691075616 0.8643776557276657 4 [QA]A 3 9 25.756 0.0 0.0 1.7704 0.0 0.0 0.0 1181.6501043622598 1181.6501043622598 13.766734124050544 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.7059771852360797 [QA]A 1.7704 - 49 1 1.813 105967.5 1.0 3338 4459 7793 HBL1_DMSO_200M_050219_2,7799 HBL1_DMSO_200M_050219_2,7799,AAAEWRRRRRQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7800 42.251 250.0 432780.0 25 0 66601.0 -1 0 136 336.20163263349474 335.19435616689475 1 336.2009155154228 MULTI CID FTMS 0 0 0 7793 217093.328125 0.3075329154265574 -13 0.8302383422851562 7 4 {M(Oxidation (M))|F} 1 -1 12.764 0.0 0.0 3.808 0.0 0.0 170.11462701826036 0.0 170.11462701826036 0.0 1.926754406820086 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 3.808 - 25 + 1 1.813 91643.7 1.0 3339 4459 7793 HBL1_DMSO_200M_050219_2,7800 HBL1_DMSO_200M_050219_2,7800, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7802 42.256 114.0 471220.0 25 0 34442.0 + 28015 PMPPRTNE 8 85 471.2300881821903 940.4456234311806 2 471.2297241091728 MULTI CID FTMS 0 0 0 7801 323149.0 0.4271269403815554 -1 0.0535163879394531 1 Unmodified _PMPPRTNE_ REV__ENSG00000101203|ENST00000358894|COL20A1;REV__ENST00000471582.5_1_20:61956720-61961007:+|nuORF;REV__ENST00000479501.5_1_20:61950534-61961007:+|nuORF;REV__nc|ENSG00000101203|Q9P218-2|COL20A1;REV__nc|ENSG00000101203|Q9P218-3|COL20A1 15.847184025352805 0.6768015514314958 4 MPPP 4 -1 56.542 0.0 0.0 6.0123 0.0 0.0 0.0 515.2241304986936 515.2241304986936 45.57319389984244 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 MPPP 6.0123 - 121 + 1 1.795 47887.9 1.0 3340 4460 7801 HBL1_DMSO_200M_050219_2,7802 HBL1_DMSO_200M_050219_2,7802,PMPPRTNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7803 42.267 611.0 160470.0 25 0 9421.9 + 43833 YFHDATRVY 9 119 586.279876383162 1170.545199833124 2 586.7814819216728 MULTI CID FTMS 0 0 0 7801 121852.2421875 0.2946011398206949 3 -0.0776863098144531 2 Unmodified _YFHDATRVY_ chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;ENSG00000087586|ENST00000395915|AURKA 24.99096001346401 0.2132109383330889 4 Y{M(Oxidation (M))|F}HD 4 5 37.779 0.0 0.0 3.2275 0.0 0.0 0.0 605.3066510701424 605.3066510701424 17.946537861557985 0.0 0.0 0.0 0 0.6549471895720985 0.0 0.3807196863200844 0.0 + Y{M(Oxidation (M))|F}HD 3.2275 + + 343 + 1 1.795 76401.7 1.0 3341 4460 7801 HBL1_DMSO_200M_050219_2,7803 HBL1_DMSO_200M_050219_2,7803,YFHDATRVY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7804 42.268 2.8 17709000.0 25 0 1956200.0 + 24983 MPPPPPQGV 9 69 460.23852327962805 918.462493626056 2 460.2392455935478 MULTI CID FTMS 0 0 0 7801 15724027.0 0.8484776586460017 2 -0.0457420349121093 3 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 34.18733598223924 0.1073653526364521 4 {NN|[MP]|[D{I|L}]|[EV]}PPP 5 4 20.005 0.0 0.0 2.1781 0.0 0.0 0.0 396.186045696838 396.186045696838 -8.371600865782867 0.0 -8.371600865782867 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}PPP 2.1781 + + 113 1 1.795 41883.3 1.0 3342 4460 7801 HBL1_DMSO_200M_050219_2,7804 HBL1_DMSO_200M_050219_2,7804,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7805 42.271 135.0 783060.0 25 0 81674.0 + 3220 AWPEKRGEI 9 94 543.2904189954048 1084.5662850576095 2 543.2913085818291 MULTI CID FTMS 0 0 0 7801 521127.6875 0.3923899796031677 -28 1.1720962524414062 4 Unmodified _AWPEKRGEI_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 17.11289562659939 0.3734572693229295 4 AWPE 4 5 46.714 0.0 0.0 4.3072 0.0 0.0 0.0 598.333460888738 598.333460888738 16.098107595439153 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + AWPE 4.3072 + + 271 + 1 1.795 82917.1 1.0 3343 4460 7801 HBL1_DMSO_200M_050219_2,7805 HBL1_DMSO_200M_050219_2,7805,AWPEKRGEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7806 42.272 41.0 1094900.0 25 0 71229.0 -1 SFIQGTTTM 9 82 501.2332809763564 1000.4520090195128 2 501.2324096560478 MULTI CID FTMS 0 0 0 7801 370794.375 0.3496487546756683 -6 0.3960533142089844 5 Oxidation (M) _SFIQGTTTM(Oxidation (M))_ ENSG00000165501|ENST00000298288|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF 11.640296217721598 0.521594087909532 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 3 -1 17.28 0.0 0.0 1.7272 0.0 0.0 0.0 650.2443423537503 650.2443423537503 -0.6786440019085624 0.0 -0.6786440019085624 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 1.7272 + + 47 1 1.795 40475.4 1.0 3344 4460 7801 HBL1_DMSO_200M_050219_2,7806 HBL1_DMSO_200M_050219_2,7806,SFIQGTTTM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7807 42.284 663.0 354410.0 25 0 34049.0 + 30805 RIIDKYEKI 9 192 393.23664906507975 1176.6881177954392 3 393.2367126345634 MULTI CID FTMS 0 0 0 7801 304178.0625 1.0 0 0.0 6 Unmodified _RIIDKYEKI_ ENSG00000173145|ENST00000371361|NOC3L 57.2037768669896 0.0276302343558183 4 [R{I|L}]{I|L}DKYEK{I|L} 9 0 + 89.539 0.0 0.0 7.6094 7.6094 94.069 0.0 0.0 0.0 16.1183473742191 14.973024840566469 14.973024840566469 16.025684359364405 0 2.018930178484529 1.2218487496163564 0.5 0.7059771852360797 + + [R{I|L}]{I|L}DKYEK{I|L};[R{I|L}]{I|L}DKYT[VG]{I|L};{I|L}R{I|L}DKYEK{I|L};{I|L}R{I|L}DKYE{I|L}K;{I|L}R{I|L}DKAS[YV]{I|L};{I|L}K[QA]GKYEK{I|L};{I|L}KQQKYEK{I|L};{I|L}R{I|L}DKAS[{I|L}V]Y;{I|L}K[QA]GKYE{I|L}K;{I|L}K[QA]GKAS[YV]{I|L} 7.6094;6.2475;6.2396;5.8006;5.737;5.224;5.0744;4.8514;4.7849;4.7251 +;-;-;-;-;-;-;-;-;- + 1045 1 1.795 187203.6 1.0 3345 4460 7801 HBL1_DMSO_200M_050219_2,7807 HBL1_DMSO_200M_050219_2,7807,RIIDKYEKI True True RIIDKYEKI 42.283551 393.236712634563 1766917.875 7801.0 ENSG00000173145|ENST00000371361|NOC3L 6.751067161560059 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7808 42.288 222.0 308850.0 25 0 25944.0 -1 TEEMLQRV 8 89 511.2530118299045 1020.491470726609 2 511.2530090212822 MULTI CID FTMS 0 0 0 7801 251473.875 0.9031825339932368 -3 0.1888504028320312 7 Oxidation (M) _TEEM(Oxidation (M))LQRV_ ENST00000597384.1_1_19:7571970-7578873:+|nuORF 32.30548876998284 0.3644845974844379 4 V[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}VQR 7 -1 35.583 0.0 0.0 3.4868 0.0 0.0 100.04105249838376 0.0 100.04105249838376 0.0 7.690322953457525 0.0 0.0 0 1.066901560044258 0.0 0.0 0.8494850021680094 V[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}VQR 3.4868 - 136 + 1 1.795 57243.1 1.0 3346 4460 7801 HBL1_DMSO_200M_050219_2,7808 HBL1_DMSO_200M_050219_2,7808,TEEMLQRV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7810 42.292 9.5 4238200.0 25 0 691330.0 + 39445 VANTMRTSL 9 51 496.7635444839125 991.512536034625 2 496.7638427615166 MULTI CID FTMS 0 0 0 7809 5209136.5 0.869410358613613 2 -0.0404739379882812 1 Unmodified _VANTMRTSL_ ENSG00000150753|ENST00000280326|CCT5;ENST00000508451.1_1_5:10250422-10254994:+|nuORF;ENST00000510326.5_1_5:10250452-10254343:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5 45.69961567697781 0.0497987121815769 4 VANTM 5 4 68.756 0.0 0.0 6.9344 0.0 0.0 0.0 472.2518404596313 472.2518404596313 56.28144697160131 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.4247425010840047 + VANTM 6.9344 + + 38 + 1 1.795 37315.2 1.0 3347 4461 7809 HBL1_DMSO_200M_050219_2,7810 HBL1_DMSO_200M_050219_2,7810,VANTMRTSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7811 42.296 231.0 320430.0 25 0 47825.0 + 43145 VYPNFRPTPK 10 75 406.8925128875632 1217.6557092628896 3 406.8925048708916 MULTI CID FTMS 0 0 0 7809 304600.6875 0.3155101203708271 4 -0.1185379028320312 2 Unmodified _VYPNFRPTPK_ ENSG00000065518|ENST00000184266|NDUFB4;ENST00000418418.1_1_17:19743579-19743825:+|nuORF;ENST00000513465.1_1_4:43901008-43901365:+|nuORF;nc|ENSG00000065518|O95168-2|NDUFB4 25.997395711884035 0.38458358153512 4 VYPN 4 6 57.423 0.0 0.0 4.7158 0.0 0.0 0.0 741.4089359879692 741.4089359879692 42.01667520279372 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.3494850021680094 + VYPN 4.7158 + + 68 + 1 1.795 62548.8 1.0 3348 4461 7809 HBL1_DMSO_200M_050219_2,7811 HBL1_DMSO_200M_050219_2,7811,VYPNFRPTPK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7813 42.3 39.0 1204700.0 25 0 167320.0 + 18089 KTIETSPSL 9 78 488.2715517811069 974.5285506290136 2 488.2735473513603 MULTI CID FTMS 0 0 0 7812 1297874.625 0.6662124084422861 -4 0.1607742309570312 1 Unmodified _KTIETSPSL_ ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI 45.69961567697781 0.0497987121815769 4 STRPS{I|L} 6 5 50.126 0.0 0.0 5.1436 0.0 0.0 315.17877041579976 0.0 315.17877041579976 0.0 27.44972548463494 0.0 0.0 0 0.9247425010840048 0.0 1.274227503252014 0.0 STRPS{I|L} 5.1436 - 315 + 1 1.795 43137.3 1.0 3349 4462 7812 HBL1_DMSO_200M_050219_2,7813 HBL1_DMSO_200M_050219_2,7813,KTIETSPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7814 42.306 303.0 348820.0 25 0 97575.0 + 21881 LPPESTQV 8 97 435.7319671401997 869.4493813471995 2 435.7324401736259 MULTI CID FTMS 0 0 0 7812 226951.890625 0.6986193571089343 6 -0.1436195373535156 2 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 26.34127834903884 0.4900704351052977 4 T{M(Oxidation (M))|F}QV 4 6 15.424 0.0 0.0 1.774 0.0 0.0 376.231438087237 0.0 376.231438087237 0.0 1.50637524615391 0.0 0.0 0 0.0 0.0 0.25 0.5 T{M(Oxidation (M))|F}QV 1.774 - 145 + 1 1.795 86735.1 1.0 3350 4462 7812 HBL1_DMSO_200M_050219_2,7814 HBL1_DMSO_200M_050219_2,7814,LPPESTQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7815 42.309 160.0 459760.0 25 0 44800.0 45179 YQPKGKCL 8 103 468.7532287631016 935.4919045930033 2 468.7525817751884 MULTI CID FTMS 0 0 0 7812 430804.4375 1.0 0 0.0 3 Unmodified _YQPKGKCL_ ENSG00000140386|ENST00000563290|SCAPER;nc|ENSG00000140386|Q9BY12-3|SCAPER 8.593279151180031 0.7721714526254883 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 5 7 15.713 0.0 0.0 1.6797 0.0 0.0 0.0 397.2217865777026 397.2217865777026 -2.7165251409206093 0.0 -2.7165251409206093 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPP 1.6797 - 234 1 1.795 61090.3 1.0 3351 4462 7812 HBL1_DMSO_200M_050219_2,7815 HBL1_DMSO_200M_050219_2,7815,YQPKGKCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7816 42.315 313.0 310320.0 25 0 38851.0 + 19155 LEDGGAPP 8 118 378.1822069287997 754.3498609243994 2 378.1821472048759 MULTI CID FTMS 0 0 0 7812 249237.40625 1.0 0 0.0 4 Unmodified _LEDGGAPP_ REV__ENSG00000151611|ENST00000649156|MMAA 10.183394434864962 0.7604730176254005 4 {[QN]|[E{I|L}]|[KN]}DE{I|L}H 6 -1 + 44.016 0.0 0.0 5.8349 5.8349 76.132 0.0 0.0 0.0 23.46787486224656 2.596373105057559 2.596373105057559 2.596373105057559 0 0.0 1.6989700043360187 0.805462187404089 0.0 {[QN]|[E{I|L}]|[KN]}DE{I|L}H;{[QN]|[E{I|L}]|[KN]}DEH{I|L};{[YC]|[HE]}D{I|L}E{I|L};{[YC]|[HE]}{I|L}DE{I|L};[H{I|L}]EDE{I|L} 5.8349;5.4908;2.3516;1.7715;0.86779 -;-;-;-;- 81 + 1 1.795 82256.5 1.0 3352 4462 7812 HBL1_DMSO_200M_050219_2,7816 HBL1_DMSO_200M_050219_2,7816,LEDGGAPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7817 42.328 770.0 228110.0 25 0 14675.0 + 16533 KAVESLRQI 9 176 522.3130057540193 1042.6114585748385 2 522.3132812380791 MULTI CID FTMS 0 0 0 7812 190254.390625 0.4451765777591756 3 -0.1100082397460937 5 Unmodified _KAVESLRQI_ ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B 24.99096001346401 0.2132109383330889 4 KAVE 4 5 42.128 0.0 0.0 4.0406 0.0 0.0 0.0 612.3493616894626 612.3493616894626 27.132542393671194 0.0 0.0 0.0 0 0.6382104921644451 0.0 0.3807196863200844 0.0 + KAVE 4.0406 + + 851 + 1 1.795 142469.4 1.0 3353 4462 7812 HBL1_DMSO_200M_050219_2,7817 HBL1_DMSO_200M_050219_2,7817,KAVESLRQI False True KAVESLRQI 42.328205 522.313281238079 2548852.5 7812.0 nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENSG00000137713|ENST00000527614|PPP2R1B 0.747943381468455 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7819 42.332 25.0 1886500.0 25 0 464750.0 + 2631 ASVPKVETV 9 69 465.26844440862754 928.5223358840552 2 465.2686340212822 MULTI CID FTMS 0 0 0 7818 2322311.25 0.2448412577502905 -14 0.823699951171875 1 Unmodified _ASVPKVETV_ ENSG00000100664|ENST00000216554|EIF5 15.847184025352805 0.4077185912009129 4 [KP]VETV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 5 + 33.633 0.0 0.0 3.6222 3.6222 80.626 0.0 0.0 0.0 2.04119982655925 17.179250024847263 2.04119982655925 24.75895023531386 0 0.0 0.0 0.4247425010840047 0.0 [KP]VETV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP]VV{[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.6222;0.95571 -;- 90 1 1.781 41865.1 1.0 3354 4463 7818 HBL1_DMSO_200M_050219_2,7819 HBL1_DMSO_200M_050219_2,7819,ASVPKVETV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7820 42.334 23.0 2084500.0 25 0 370430.0 + 44492 YPARAPSVV 9 79 480.26940599084605 958.524259048492 2 480.2692443728447 MULTI CID FTMS 0 0 0 7818 1305257.25 0.8073856276414149 2 -0.07806396484375 2 Unmodified _YPARAPSVV_ ENSG00000197321|ENST00000355867|SVIL;ENST00000422642.6_2_10:30987145-31001569:+|nuORF;nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-3|SVIL;nc|ENSG00000197321|O95425-4|SVIL 18.373094154950223 0.3393451798331396 4 YP 2 7 37.691 0.0 0.0 3.9322 0.0 0.0 0.0 695.3845865987261 695.3845865987261 17.311675286346926 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.0 + YP 3.9322 + + 95 + 1 1.781 42977.3 1.0 3355 4463 7818 HBL1_DMSO_200M_050219_2,7820 HBL1_DMSO_200M_050219_2,7820,YPARAPSVV False True YPARAPSVV 42.333615 480.269244372845 15663698.0 7818.0 ENST00000422642.6_2_10:30987145-31001569:+|nuORF;;nc|ENSG00000197321|O95425-3|SVIL;;nc|ENSG00000197321|O95425-2|SVIL;;nc|ENSG00000197321|O95425-4|SVIL;;ENSG00000197321|ENST00000355867|SVIL 3.033089796702067 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7821 42.335 11.0 4820600.0 25 0 1370200.0 + 38817 TVFSHAQTV 9 73 495.25659498857146 988.498637043943 2 495.2567016482353 MULTI CID FTMS 0 0 0 7818 5781072.5 0.8178891664433098 -5 0.192718505859375 3 Unmodified _TVFSHAQTV_ ENSG00000177954|ENST00000651669|RPS27;ENSG00000185088|ENST00000330964|RPS27L;ENST00000482846.1_1_15:63447754-63448774:-|nuORF 34.40172386719151 0.1061884637610825 4 [HS]{M(Oxidation (M))|F}AQTVTV 9 6 + 44.83 0.0 0.0 4.5351 4.5351 73.686 0.0 0.0 0.0 4.247425010840047 7.830145895351848 4.247425010840047 4.247425010840047 0 0.5682503180159344 0.0 0.805462187404089 0.0 [HS]{M(Oxidation (M))|F}AQTVTV;[HA]YAQTVTV;{[TV]|[{I|L}S]}Q[WQ]QTV;[HS]{M(Oxidation (M))|F}A[AG]TVTV;{[TV]|[{I|L}S]}Q[WQ]E[KA];{[TV]|[{I|L}S]}[NG]{[WN]|[YH]}VTV;[HA]QS{M(Oxidation (M))|F}TVTV;[HA]YA[AG]TVTV;{[TV]|[{I|L}S]}Q[WQ][AG]TV;{[TV]|[{I|L}S]}[AG][WQ]QTV 4.5351;4.1054;4.0507;3.6036;3.2977;3.2254;3.1918;3.1739;3.1137;3.1137 -;-;-;-;-;-;-;-;-;- 211 1 1.781 44663.7 1.0 3356 4463 7818 HBL1_DMSO_200M_050219_2,7821 HBL1_DMSO_200M_050219_2,7821,TVFSHAQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7822 42.336 59.0 756680.0 25 0 75777.0 + 24859 MPMGPGHASV 10 79 492.2255174155769 982.436481897954 2 492.2256957888603 MULTI CID FTMS 0 0 0 7818 898205.375 0.7791951076347889 3 -0.0835418701171875 4 Unmodified _MPMGPGHASV_ ENSG00000161021|ENST00000292599|MAML1 36.12702656103203 0.1984647928738587 4 MPMG[KA][WY] 8 5 + 60.138 0.0 0.0 6.1213 6.1213 82.003 0.0 0.0 0.0 48.87899033331902 0.4575749056067479 0.4575749056067479 5.747942838938727 0 0.7742275032520141 2.0 0.0 0.0 MPMG[KA][WY];MPMG[PG][HA]SV;MPM[KQ][WY];MPM[NP][HA]SV;M[{M(Oxidation (M))|F}V]NRMSV 6.1213;5.5362;5.4689;4.8714;0.90648 -;+;-;-;- + 159 + 1 1.781 42240.4 1.0 3357 4463 7818 HBL1_DMSO_200M_050219_2,7822 HBL1_DMSO_200M_050219_2,7822,MPMGPGHASV False True MPMGPGHASV 42.336261 492.22569578886 17061356.0 7818.0 ENSG00000161021|ENST00000292599|MAML1 9.587288538614908 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7823 42.34 205.0 363810.0 25 0 79878.0 -1 0 98 483.2803538708772 482.2730774042772 1 483.2815124392509 MULTI CID FTMS 0 0 0 7818 417089.625 0.3775919922433741 -9 0.4737396240234375 5 4 {[QS]|[NT]}A 3 -1 12.517 0.0 0.0 2.5955 0.0 0.0 0.0 193.1219292932022 193.1219292932022 1.4081030098857656 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2059771852360797 {[QS]|[NT]}A 2.5955 - 27 1 1.781 63293.4 1.0 3358 4463 7818 HBL1_DMSO_200M_050219_2,7823 HBL1_DMSO_200M_050219_2,7823, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7824 42.354 798.0 147970.0 25 0 12933.0 + 12504 GVDQEHFSNV 10 156 566.2583697387364 1130.5021865442727 2 566.2575561404228 MULTI CID FTMS 0 0 0 7818 195396.6875 0.8740502293847618 -3 0.0776863098144531 6 Unmodified _GVDQEHFSNV_ ENSG00000138594|ENST00000308580|TMOD3 53.40400417844725 0.0601721406801337 4 [VG]A{M(Oxidation (M))|F}{M(Oxidation (M))|F}[YQ]SNV 10 5 + 47.888 0.0 0.0 4.236 4.236 65.393 0.0 0.0 0.0 4.714628317912784 11.376122473046578 4.714628317912784 0.4139268515822465 0 1.3882104921644451 2.0 0.2396518287104437 0.3807196863200844 [VG]A{M(Oxidation (M))|F}{M(Oxidation (M))|F}[YQ]SNV;[VG]A{M(Oxidation (M))|F}{M(Oxidation (M))|F}[SG]{M(Oxidation (M))|F}SNV;[VG]A{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M]{M(Oxidation (M))|F}SNV;[VS]C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}SRNV;[VS]C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}SVGNV;[YT][MN]{M(Oxidation (M))|F}SRNV;[VG]A{M(Oxidation (M))|F}{M(Oxidation (M))|F}[YQ]SGGV;[VS]C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}SNRV;[VS]C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}RSNV;[VG]AP{[YD]|[{M(Oxidation (M))|F}M]}[C(Carbamidomethyl (C))H]NV 4.236;4.1993;3.884;3.8189;3.4756;3.449;3.4253;3.392;3.3801;3.3525 -;-;-;-;-;-;-;-;-;- 6380 1 1.781 92883.2 1.0 3359 4463 7818 HBL1_DMSO_200M_050219_2,7824 HBL1_DMSO_200M_050219_2,7824,GVDQEHFSNV True True GVDQEHFSNV 42.353951 566.257556140423 1669163.75 7818.0 ENSG00000138594|ENST00000308580|TMOD3 6.463254610697429 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7825 42.359 299.0 299740.0 25 0 18574.0 40311 VGWGPGRVWTV 11 94 405.2193556320232 1212.6362374962696 3 405.2189514040947 MULTI CID FTMS 0 0 0 7818 192287.640625 0.0113882068530377 10 -0.2718849182128906 7 Unmodified _VGWGPGRVWTV_ ENST00000251546.8_1_1:11721807-11722026:+|nuORF 18.1463463914782 0.6576820063886638 4 VT{I|L}Y[KA]WTV 9 7 53.399 0.0 0.0 4.4036 0.0 0.0 133.03788358715002 0.0 133.03788358715002 0.0 39.41992052842137 0.0 0.0 0 0.3054621874040891 0.0 1.0501648626366045 0.0 VT{I|L}Y[KA]WTV 4.4036 - 337 + 1 1.781 73301.3 1.0 3360 4463 7818 HBL1_DMSO_200M_050219_2,7825 HBL1_DMSO_200M_050219_2,7825,VGWGPGRVWTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7827 42.375 800.0 156250.0 25 0 7072.0 38730 TTYVSGGVEEV 11 140 570.7732002021908 1139.5318474711814 2 570.7731201052666 MULTI CID FTMS 0 0 0 7826 147187.0 0.536138779140693 -1 0.031219482421875 1 Unmodified _TTYVSGGVEEV_ ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3 34.40172386719151 0.2986346176549658 4 {[TV]|[{I|L}S]}T[PS]C[MT]TTV 11 8 + 43.012 0.0 0.0 3.7745 3.7745 64.449 0.0 0.0 0.0 0.6260180594693665 9.164212927358314 0.6260180594693665 0.6260180594693665 0 1.1549471895720984 1.3979400086720375 1.3494850021680094 0.0 {[TV]|[{I|L}S]}T[PS]C[MT]TTV;[PS]V[RD]{[YC]|[HE]}TTV;{[TV]|[{I|L}S]}{[RE]|[WV]}C[MT]TTV;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[W{M(Oxidation (M))|F}]ETV;[PS]V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[YD]|[{M(Oxidation (M))|F}M]}TTV;{[DS]|[MA]|[CV]|TT}V[PS]C[MT]TTV;{[TV]|[{I|L}S]}T[PS]C[W{M(Oxidation (M))|F}]TV;{[TV]|[{I|L}S]}T[YQ]{[CP]|[EA]}ETV;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[MT]TTV;[PS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[W{M(Oxidation (M))|F}]ETV 3.7745;3.7196;3.5003;3.2422;3.2422;3.2311;3.155;3.0699;3.0654;2.9331 -;-;-;-;-;-;-;-;-;- 1035 1 1.781 98077.2 0.8100000023841858 3361 4464 7826 HBL1_DMSO_200M_050219_2,7827 HBL1_DMSO_200M_050219_2,7827,TTYVSGGVEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7828 42.379 207.0 595560.0 25 0 50493.0 + 4980 DGRQFPKV 8 140 316.1753352609141 945.5041763829424 3 316.1752502322197 MULTI CID FTMS 0 0 0 7826 293253.65625 0.5565161031833463 -6 0.22393798828125 2 Unmodified _DGRQFPKV_ ENSG00000111641|ENST00000322166|NOP2;ENST00000536506.5_1_12:6669839-6672276:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 10.823927491677226 0.7510103885582552 4 V 1 7 10.596 0.0 0.0 1.1207 0.0 0.0 828.4245845634097 0.0 828.4245845634097 0.0 0.4186443689917318 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1207 + + 120 + 1 1.781 102036.8 1.0 3362 4464 7826 HBL1_DMSO_200M_050219_2,7828 HBL1_DMSO_200M_050219_2,7828,DGRQFPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7829 42.392 761.0 179380.0 25 0 7219.2 + 22535 LPWHDGKQV 9 150 540.2856680657221 1078.556783198244 2 540.2857543826103 MULTI CID FTMS 0 0 0 7826 225375.953125 1.0 0 0.0 3 Unmodified _LPWHDGKQV_ ENSG00000049656|ENST00000320895|CLPTM1L;nc|ENSG00000049656|Q96KA5-2|CLPTM1L 79.42699986076722 0.0176555798755335 4 {I|L}PWHDGKQV 9 0 + 67.039 0.0 0.0 6.2156 6.2156 73.998 0.0 0.0 0.0 15.016317135697804 0.657205584423366 0.657205584423366 0.657205584423366 0 1.9870768395504903 2.0 0.0 1.4049471895720984 + + {I|L}PWHDGKQV;{I|L}PWHDGKN{I|L};{I|L}PWHDGKVQ;{I|L}PWHDGK[AG]V;{I|L}PWHDGKGG{I|L};{I|L}PWAA[SG]{I|L}HQ;[{I|L}P]MS[WH]P{I|L}V;{I|L}PWHD[{I|L}A]EV;[{I|L}P][DN][PS]PQ{I|L}V;{I|L}PWH[WE]{I|L}V 6.2156;6.1547;5.7389;4.968;4.9071;4.8283;4.8233;4.5812;4.5768;4.556 +;-;-;-;-;-;-;-;-;- + 3021 + 1 1.781 109693.6 1.0 3363 4464 7826 HBL1_DMSO_200M_050219_2,7829 HBL1_DMSO_200M_050219_2,7829,LPWHDGKQV True True LPWHDGKQV 42.392359 540.28575438261 1453891.0 7826.0 nc|ENSG00000049656|Q96KA5-2|CLPTM1L;;ENSG00000049656|ENST00000320895|CLPTM1L 6.6065545082092285 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7830 42.406 800.0 298420.0 25 0 50050.0 27789 PLPPPPPPP 9 143 454.765498880348 907.516444827496 2 454.7655212283134 MULTI CID FTMS 0 0 0 7826 132665.0 0.4411146611543266 -27 1.1760482788085938 4 Unmodified _PLPPPPPPP_ ENSG00000009694|ENST00000371130|TENM1;ENSG00000100312|ENST00000216139|ACR;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000117560|ENST00000367721|FASLG;ENSG00000124496|ENST00000695948|TRERF1;ENSG00000126460|ENST00000246794|PRRG2;ENSG00000132510|ENST00000448097|KDM6B;ENSG00000138771|ENST00000296043|SHROOM3;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000141456|ENST00000572293|PELP1;ENSG00000146083|ENST00000274811|RNF44;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000160685|ENST00000535420|ZBTB7B;ENSG00000170234|ENST00000307063|PWWP2A;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000175073|ENST00000310421|VCPIP1;ENSG00000175785|ENST00000393140|PRIMA1;ENSG00000176182|ENST00000322217|MYPOP;ENSG00000188779|ENST00000380035|SKOR1;ENSG00000204334|ENST00000697325|ERICH2;ENSG00000248905|ENST00000616417|FMN1;ENSG00000259956|ENST00000563281|RBM15B;ENST00000361272.8_2_8:17102747-17104366:-|nuORF;ENST00000379565.7_1_X:20227482-20284914:-|nuORF;ENST00000508096.1_1_10:126605730-126631034:+|nuORF;ENST00000508478.1_1_5:175957081-175957609:-|nuORF;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENST00000596700.5_1_19:50084718-50093643:+|nuORF;ENST00000597121.5_1_19:50086773-50093643:+|nuORF;nc|ENSG00000009694|Q9UKZ4-2|TENM1;nc|ENSG00000110076|P58401|NRXN2;nc|ENSG00000117560|P48023-2|FASLG;nc|ENSG00000124496|Q96PN7|TRERF1;nc|ENSG00000132510|O15054-1|KDM6B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000146083|Q7L0R7-2|RNF44;nc|ENSG00000160685|O15156-2|ZBTB7B;nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170234|Q96N64-2|PWWP2A;nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000175785|Q86XR5-2|PRIMA1;nc|ENSG00000188779|P84550-3|SKOR1;nc|ENSG00000248905|Q68DA7-5|FMN1;REV__ENSG00000048991|ENST00000683871|R3HDM1;REV__ENSG00000066855|ENST00000262146|MTFR1;REV__ENSG00000068489|ENST00000262293|PRR11;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000100592|ENST00000360909|DAAM1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000119596|ENST00000325680|YLPM1;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000125740|ENST00000353609|FOSB;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__ENSG00000132510|ENST00000448097|KDM6B;REV__ENSG00000135250|ENST00000393651|SRPK2;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138081|ENST00000403359|FBXO11;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__ENSG00000141431|ENST00000269197|ASXL3;REV__ENSG00000145414|ENST00000274054|NAF1;REV__ENSG00000146122|ENST00000274867|DAAM2;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152409|ENST00000396137|JMY;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000157827|ENST00000288670|FMNL2;REV__ENSG00000162775|ENST00000369784|RBM15;REV__ENSG00000164916|ENST00000328914|FOXK1;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000173166|ENST00000319170|RAPH1;REV__ENSG00000173917|ENST00000330070|HOXB2;REV__ENSG00000175073|ENST00000310421|VCPIP1;REV__ENSG00000176624|ENST00000406189|MEX3C;REV__ENSG00000186472|ENST00000333891|PCLO;REV__ENSG00000187017|ENST00000645284|ESPN;REV__ENSG00000187164|ENST00000355371|SHTN1;REV__ENSG00000203485|ENST00000392634|INF2;REV__ENSG00000215045|ENST00000457091|GRID2IP;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000274209|ENST00000620264|ANTXRL;REV__ENST00000324225.8_1_11:117049861-117050083:+|nuORF;REV__ENST00000358635.7_1_4:140005384-140005639:-|nuORF;REV__ENST00000368219.1_1_1:156698226-156698472:-|nuORF;REV__ENST00000379565.7_1_X:20227482-20284914:-|nuORF;REV__ENST00000424808.6_1_8:66582187-66620357:+|nuORF;REV__ENST00000471339.1_1_5:173036657-173043649:-|nuORF;REV__ENST00000519935.1_1_7:27209203-27211037:+|nuORF;REV__ENST00000587358.1_1_19:45974364-45976267:+|nuORF;REV__nc|ENSG00000048991|Q15032-2|R3HDM1;REV__nc|ENSG00000048991|Q15032-3|R3HDM1;REV__nc|ENSG00000048991|Q15032-4|R3HDM1;REV__nc|ENSG00000048991|Q15032|R3HDM1;REV__nc|ENSG00000066855|Q15390-2|MTFR1;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100592|Q9Y4D1-3|DAAM1;REV__nc|ENSG00000100592|Q9Y4D1|DAAM1;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000119596|P49750-1|YLPM1;REV__nc|ENSG00000119596|P49750-3|YLPM1;REV__nc|ENSG00000125740|P53539-10|FOSB;REV__nc|ENSG00000125740|P53539-2|FOSB;REV__nc|ENSG00000125740|P53539-3|FOSB;REV__nc|ENSG00000125740|P53539-5|FOSB;REV__nc|ENSG00000125740|P53539-8|FOSB;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1;REV__nc|ENSG00000132510|O15054-1|KDM6B;REV__nc|ENSG00000135250|P78362|SRPK2;REV__nc|ENSG00000138081|Q86XK2-4|FBXO11;REV__nc|ENSG00000138081|Q86XK2-5|FBXO11;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3;REV__nc|ENSG00000140836|Q15911-2|ZFHX3;REV__nc|ENSG00000146122|Q86T65-4|DAAM2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000157827|Q96PY5|FMNL2;REV__nc|ENSG00000162775|Q96T37-2|RBM15;REV__nc|ENSG00000162775|Q96T37-3|RBM15;REV__nc|ENSG00000162775|Q96T37-4|RBM15;REV__nc|ENSG00000170004|Q12873-3|CHD3;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__nc|ENSG00000187017|B1AK53-2|ESPN;REV__nc|ENSG00000187164|A0MZ66-2|SHTN1;REV__nc|ENSG00000187164|A0MZ66-3|SHTN1;REV__nc|ENSG00000187164|A0MZ66-4|SHTN1;REV__nc|ENSG00000187164|A0MZ66-5|SHTN1;REV__nc|ENSG00000187164|A0MZ66-6|SHTN1;REV__nc|ENSG00000187164|A0MZ66-8|SHTN1;REV__nc|ENSG00000203485|Q27J81-2|INF2;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__PCLO|p.V3720Sfs*2|1|0.13|ENSG00000186472|chr7:82916828-82916829|-/T|frameshift_variant 56.04830969593885 0.0282699710924866 4 [{I|L}P]PPPP[YK] 8 3 + 39.862 0.0 0.0 4.3924 4.3924 81.112 0.0 0.0 0.0 8.724244651523545 6.989700043360188 6.989700043360188 12.155177696945287 0 1.2059771852360797 1.5228787452803376 0.0 0.0 [{I|L}P]PPPP[YK];[{I|L}P][YK]P[YK];[YK]{I|L}PP[YK];{[HG]|PP}P{I|L}PP[YK];{[HG]|PP}{I|L}PPP[YK];[YK]P{I|L}P[YK];{[HG]|PP}PP{I|L}P[YK];[{I|L}P]P[YK][YK];[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[YK];[{I|L}P]PP[KT]QQ 4.3924;3.053;2.8655;2.7143;2.5203;2.4459;2.2948;2.1688;1.9244;1.7486 -;-;-;-;-;-;-;-;-;- 329 1 1.781 185626.7 0.800000011920929 3364 4464 7826 HBL1_DMSO_200M_050219_2,7830 HBL1_DMSO_200M_050219_2,7830,PLPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7832 42.41 1.6 28955000.0 25 0 5209000.0 + 2189 AQAPDLQRV 9 57 499.2749073758181 996.5352618184362 2 499.2752258181572 MULTI CID FTMS 0 0 0 7831 34685992.0 0.7351542510220651 5 -0.1053199768066406 1 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 38.17557092003332 0.0854718145212029 4 [QA]APD{I|L}Q[RV] 9 0 + 56.321 0.0 0.0 5.6517 5.6517 84.256 0.0 0.0 0.0 42.82637491194109 4.762036441594191 4.762036441594191 9.208187539523747 0 1.0 0.9208187539523752 0.0 0.0 + + [QA]APD{I|L}Q[RV];[QA]APD{I|L}[AG][RV];[QA]AV[EP]Q[RV];[QA]AV[EP][AG][RV] 5.6517;4.7277;3.7701;2.8461 +;-;-;- + 51 + 1 1.77 43553.1 1.0 3365 4465 7831 HBL1_DMSO_200M_050219_2,7832 HBL1_DMSO_200M_050219_2,7832,AQAPDLQRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7833 42.412 14.0 4041800.0 25 0 586390.0 + 6675 EAYLGKTV 8 73 440.742217740185 879.4698825471701 2 440.7424499392509 MULTI CID FTMS 0 0 0 7831 4437042.5 0.9668674035882052 -1 0.046844482421875 2 Unmodified _EAYLGKTV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 58.6788170122104 0.1149141431586871 4 {[CP]|[EA]}Y{I|L}GKTV 8 0 + 41.341 0.0 0.0 4.7006 4.7006 85.267 0.0 0.0 0.0 18.412294893538387 16.190709717085955 16.190709717085955 41.34077403061495 0 0.5941876774005248 0.0 0.805462187404089 0.0 + + {[CP]|[EA]}Y{I|L}GKTV 4.7006 + + 122 + 1 1.77 52550.2 1.0 3366 4465 7831 HBL1_DMSO_200M_050219_2,7833 HBL1_DMSO_200M_050219_2,7833,EAYLGKTV True True EAYLGKTV 42.41168 440.742449939251 95431392.0 7831.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 6.238053480784099 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7835 42.416 35.0 1323700.0 25 0 134950.0 33398 SGTPWVGFCP 10 86 350.82834647680926 1049.4632100306278 3 350.8283874392509 MULTI CID FTMS 0 0 0 7834 1628267.25 0.9534123985335784 3 -0.0791130065917968 1 Unmodified _SGTPWVGFCP_ ENST00000270645.7_1_19:50046507-50046666:+|nuORF 7.289230182591677 0.6929195370588109 4 V 1 9 15.485 0.0 0.0 1.4755 0.0 0.0 932.3836639874622 0.0 932.3836639874622 0.0 4.771212547196626 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.4755 + + 73 + 1 1.77 45151.7 1.0 3367 4466 7834 HBL1_DMSO_200M_050219_2,7835 HBL1_DMSO_200M_050219_2,7835,SGTPWVGFCP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7836 42.43 800.0 175040.0 25 0 23825.0 + 31495 RQDDYFTSYNN 11 133 711.7990622814344 1421.5835716296688 2 711.7996703982353 MULTI CID FTMS 0 0 0 7834 226618.890625 0.0944699916032516 14 -0.502593994140625 2 Unmodified _RQDDYFTSYNN_ REV__ENSG00000119321|ENST00000238256|FKBP15;REV__nc|ENSG00000119321|Q5T1M5-2|FKBP15;REV__nc|ENSG00000119321|Q5T1M5-3|FKBP15 15.248480904072842 0.7179608125786238 4 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y 13 -1 + 123.34 0.0 0.0 8.6761 8.6761 83.674 0.0 0.0 0.0 3.227266044202836 16.642078980768076 3.227266044202836 2.3959995082975496 0 0.9247425010840048 1.2218487496163564 1.874803706770636 2.059894379144197 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGADAGA{M(Oxidation (M))|F}Y;[QA]DHEAGAQDA{M(Oxidation (M))|F}Y;[AG]DAHEAGAQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}Y;[AG]DAHEAQQDA{M(Oxidation (M))|F}Y 8.6761;8.5076;8.462;8.4565;8.4491;8.316;8.2594;8.2425;8.2295;8.197 -;-;-;-;-;-;-;-;-;- 39041 1 1.77 104512.2 0.9900000095367432 3368 4466 7834 HBL1_DMSO_200M_050219_2,7836 HBL1_DMSO_200M_050219_2,7836,RQDDYFTSYNN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7838 42.434 40.0 983910.0 25 0 56385.0 -1 DGACRRRC 8 82 525.7380710961268 1049.4615892590534 2 525.7392455935478 MULTI CID FTMS 0 0 0 7837 1372873.375 0.955877535432698 3 -0.0817146301269531 1 2 Carbamidomethyl (C) _DGAC(Carbamidomethyl (C))RRRC(Carbamidomethyl (C))_ ENST00000437899.5_1_10:46951605-46951668:-|nuORF 12.531546534597751 0.7257836412119636 4 [DG]AP 4 -1 31.727 0.0 0.0 3.0231 0.0 0.0 0.0 706.3034151666624 706.3034151666624 14.737059521965108 0.0 0.0 0.0 0 0.805462187404089 1.0969100130080565 0.0 0.0 [DG]AP 3.0231 - 34 + 1 1.77 39042.8 1.0 3369 4467 7837 HBL1_DMSO_200M_050219_2,7838 HBL1_DMSO_200M_050219_2,7838,DGACRRRC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7839 42.44 312.0 326530.0 25 0 54596.0 + 4982 DGRQFPKV 8 113 473.75926173571 945.50397053822 2 473.7587768435478 MULTI CID FTMS 0 0 0 7837 146824.515625 0.5688922644006476 -5 0.1336135864257812 2 Unmodified _DGRQFPKV_ ENSG00000111641|ENST00000322166|NOP2;ENST00000536506.5_1_12:6669839-6672276:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 22.736283301280096 0.5659792798204337 4 P{M(Oxidation (M))|F}QCPG 6 6 32.472 0.0 0.0 3.4344 0.0 0.0 245.17280926490545 68.05138574771718 313.2241950126226 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.3807196863200844 P{M(Oxidation (M))|F}QCPG 3.4344 - 365 + 1 1.77 85543.5 1.0 3370 4467 7837 HBL1_DMSO_200M_050219_2,7839 HBL1_DMSO_200M_050219_2,7839,DGRQFPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7841 42.456 795.0 311600.0 25 0 74371.0 14235 IDRWSRIV 8 169 522.8007703496495 1043.586987766099 2 522.8010742068291 MULTI CID FTMS 0 0 0 7840 271208.75 0.4314229458857664 -7 0.1521492004394531 1 Unmodified _IDRWSRIV_ ENSG00000166206|ENST00000311550|GABRB3;nc|ENSG00000166206|P28472-2|GABRB3;nc|ENSG00000166206|P28472-3|GABRB3;nc|ENSG00000166206|P28472-4|GABRB3 26.88365393820708 0.4786498634179528 4 VE 2 8 30.918 0.0 0.0 2.9626 0.0 0.0 0.0 812.4551940675124 812.4551940675124 8.521825181113623 0.0 0.0 0.0 0 0.3494850021680094 0.7958800173440752 0.0 0.0 VE 2.9626 - 578 + 1 1.77 194328.1 1.0 3371 4468 7840 HBL1_DMSO_200M_050219_2,7841 HBL1_DMSO_200M_050219_2,7841,IDRWSRIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7842 42.469 800.0 246700.0 25 0 62777.0 + 18889 LAVCLVKAPL 10 159 513.8242902679607 1025.6340276027213 2 513.8249999880791 MULTI CID FTMS 0 0 0 7840 125694.375 0.576775115823717 -6 0.1436195373535156 2 Unmodified _LAVCLVKAPL_ REV__ENST00000380636.1_1_X:12993550-12993946:+|nuORF 15.847184025352805 0.5816416552707754 4 {[DA]|[EG]}{I|L}[{I|L}T]KR 7 -1 30.83 0.0 0.0 3.0059 0.0 0.0 0.0 225.12341390783448 225.12341390783448 6.031307827563982 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.5138793319624578 0.4247425010840047 {[DA]|[EG]}{I|L}[{I|L}T]KR 3.0059 - 673 1 1.77 156506.5 0.7400000095367432 3372 4468 7840 HBL1_DMSO_200M_050219_2,7842 HBL1_DMSO_200M_050219_2,7842,LAVCLVKAPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7843 42.477 417.0 255820.0 25 0 27825.0 + 21302 LPENSMRAV 9 123 508.76099627698153 1015.5074396207632 2 508.7639343142509 MULTI CID FTMS 0 0 0 7840 116293.28125 0.0603219363630345 -8 0.189361572265625 3 Unmodified _LPENSRGPF_ nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-17|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1 56.17704186161178 0.0281986971544335 4 {I|L}PENSMRAV 9 4 + 79.691 0.0 0.0 7.8474 7.8474 80.824 0.0 0.0 0.0 24.266641599339323 1.6481024864599192 1.6481024864599192 1.6481024864599192 0 0.3807196863200844 2.0 0.6747425010840047 0.8494850021680094 {I|L}PENSMRAV;{I|L}PENSMRG{I|L};{I|L}PEGGSMRAV;{I|L}PEGGSMRG{I|L} 7.8474;7.6851;6.9407;6.7784 -;-;-;- 399 + 1 1.77 93078.4 1.0 3373 4468 7840 HBL1_DMSO_200M_050219_2,7843 HBL1_DMSO_200M_050219_2,7843,LPENSRGPF True True LPENSMRAV 42.476888 508.763934314251 33036322.0 7840.0 nc|ENSG00000131196|O95644-10|NFATC1;;nc|ENSG00000131196|O95644-5|NFATC1;;ENSG00000131196|ENST00000427363|NFATC1;;nc|ENSG00000131196|O95644-11|NFATC1;;nc|ENSG00000131196|O95644-8|NFATC1;;nc|ENSG00000131196|O95644-2|NFATC1;;nc|ENSG00000131196|O95644-6|NFATC1;;nc|ENSG00000131196|O95644-4|NFATC1;;nc|ENSG00000131196|O95644-17|NFATC1;;nc|ENSG00000131196|O95644-3|NFATC1;;chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1 5.346503575642903 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7844 42.491 800.0 169020.0 25 0 17463.0 -1 0 145 575.340097879418 574.3328214128179 1 575.3410522341728 MULTI CID FTMS 0 0 0 7840 109954.2890625 0.4052142407256903 6 -0.2181358337402343 4 4 {[VA]|[{I|L}G]}TAT{I|L} 6 -1 + 51.966 0.0 0.0 9.048 9.048 91.409 0.0 0.0 0.0 3.0069812690926057 25.974184576165342 3.0069812690926057 7.920501761731522 0 0.9163865622122672 1.0969100130080565 1.1989700043360187 0.0 {[VA]|[{I|L}G]}TAT{I|L};[TA]VAT{I|L};[TA]T{I|L}G{I|L};[TA]{I|L}GT{I|L};[{I|L}T]GAT{I|L};[TA]{I|L}TG{I|L};{[TV]|[{I|L}S]}AAT{I|L};[TA]G{I|L}T{I|L};[TA]TAV{I|L};[{I|L}T]QT{I|L} 9.048;7.6689;6.6986;6.3188;6.0922;5.8879;5.8278;5.7056;5.658;5.2353 -;-;-;-;-;-;-;-;-;- 483 1 1.77 103480.7 0.7099999785423279 3374 4468 7840 HBL1_DMSO_200M_050219_2,7844 HBL1_DMSO_200M_050219_2,7844, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7846 42.495 28.0 2347900.0 25 0 234530.0 + 3224 AWPEKRGEI 9 81 362.5294940101128 1084.5666526305386 3 362.5293762087822 MULTI CID FTMS 0 0 0 7845 1833627.25 0.6056643273604034 -18 0.8187065124511719 1 Unmodified _AWPEKRGEI_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 22.736283301280096 0.2418982879461534 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE{I|L} 5 4 43.94 0.0 0.0 4.0514 0.0 0.0 0.0 485.2479311719374 485.2479311719374 31.46591250700361 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE{I|L} 4.0514 - 42 + 1 1.762 60083.7 1.0 3375 4469 7845 HBL1_DMSO_200M_050219_2,7846 HBL1_DMSO_200M_050219_2,7846,AWPEKRGEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7847 42.496 46.0 1087200.0 25 0 136920.0 + 24152 LYQPRASEM 9 60 547.7683434665378 1093.5221339998757 2 547.7688476443291 MULTI CID FTMS 0 0 0 7845 1297944.25 0.7113993279097767 5 -0.1671562194824218 2 Unmodified _LYQPRASEM_ ENSG00000168081|ENST00000301908|PNOC;nc|ENSG00000168081|Q13519-2|PNOC 39.94969957227396 0.0757326808254658 4 {I|L}YQP 4 5 59.993 0.0 0.0 5.4862 0.0 0.0 0.0 589.2417086236936 589.2417086236936 40.38872836444014 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + {I|L}YQP 5.4862 + + 79 + 1 1.762 43946.8 1.0 3376 4469 7845 HBL1_DMSO_200M_050219_2,7847 HBL1_DMSO_200M_050219_2,7847,LYQPRASEM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7848 42.498 42.0 1906700.0 25 0 362640.0 + 14200 IDKKTHFR 8 66 348.8699633379118 1043.5880606139356 3 348.8697692751884 MULTI CID FTMS 0 0 0 7845 1308655.5 0.5433552507633214 -5 0.1314353942871093 3 Unmodified _IDKKTHFR_ REV__ENSG00000162510|ENST00000373765|MATN1;REV__ENST00000494561.1_1_1:31186977-31188978:-|nuORF 7.910154910731844 0.7763180056447161 4 {I|L}V 2 -1 20.969 0.0 0.0 2.0093 0.0 0.0 0.0 828.4164795437027 828.4164795437027 10.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 2.0093 - 18 + 1 1.762 70527.8 1.0 3377 4469 7845 HBL1_DMSO_200M_050219_2,7848 HBL1_DMSO_200M_050219_2,7848,IDKKTHFR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7849 42.511 800.0 140670.0 25 0 9702.7 + -1 LYQPRASEM 9 105 555.7663237970578 1109.5180946609155 2 555.7662231326103 MULTI CID FTMS 0 0 0 7845 126659.46875 0.8485645010921352 1 -0.0207290649414062 4 Oxidation (M) _YLQKPEWM(Oxidation (M))_ nc|ENSG00000168081|Q13519-2|PNOC;ENSG00000168081|ENST00000301908|PNOC 42.09456458481378 0.1992492688217789 4 {I|L}YQ[WD]{I|L}C(Carbamidomethyl (C)){I|L} 8 -1 + 61.675 0.0 0.0 5.5587 5.5587 84.639 0.0 0.0 0.0 42.38306055802156 3.729494892538696 3.729494892538696 9.262137858390815 0 0.4247425010840047 2.0 0.75 0.3252574989159953 {I|L}YQ[WD]{I|L}C(Carbamidomethyl (C)){I|L};{I|L}YQ[WD]{I|L}[CG]{I|L};{I|L}Y[AG][WD]{I|L}C(Carbamidomethyl (C)){I|L};[Y{I|L}][HV]EG[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F} 5.5587;4.7239;4.4308;3.1597 -;-;-;- 461 + 1 1.762 88851.5 0.7400000095367432 3378 4469 7845 HBL1_DMSO_200M_050219_2,7849 HBL1_DMSO_200M_050219_2,7849,YLQKPEWM False False LYQPRASEM 42.511402 555.76622313261 1984345.375 7845.0 nc|ENSG00000168081|Q13519-2|PNOC;;ENSG00000168081|ENST00000301908|PNOC 2.805602510770162 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7851 42.527 800.0 98732.0 25 0 9476.2 + 45906 YYSYSQISH 9 119 574.255402399574 0 574.2552978396416 PEAK CID FTMS 0 0 0 7850 41790.93359375 0.462042159092244 1 -0.0437507629394531 1 Unmodified _YYSYSQISH_ ENSG00000100109|ENST00000407690|TFIP11 29.081581746732265 0.1187435359889091 4 DY 2 8 14.996 0.0 0.0 1.308 0.0 0.0 733.339709973173 132.04587732486564 865.3855872980386 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 DY 1.308 - 160 + 1 1.762 63333.8 0.6100000143051147 3379 4470 7850 HBL1_DMSO_200M_050219_2,7851 HBL1_DMSO_200M_050219_2,7851,YYSYSQISH True True YYSYSQISH 42.527406 574.255297839642 1096020.5 7850.0 ENSG00000100109|ENST00000407690|TFIP11 4.053166389465332 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7852 42.533 320.0 231550.0 25 0 14763.0 + 3841 DAIYGAGEDGI 11 109 540.7437351997235 1079.4729174662468 2 540.7444335818291 MULTI CID FTMS 0 0 0 7850 214309.09375 0.4080704139130302 -5 0.1053199768066406 2 Unmodified _DAIYGAGEDGI_ REV__ENSG00000160838|ENST00000337428|LRRC71;REV__nc|ENSG00000160838|Q8N4P6-2|LRRC71 21.53697664764585 0.586507868110548 4 {[DA]|[EG]}DQQ[YE]V{I|L} 9 -1 + 45.128 0.0 0.0 4.1806 4.1806 71.197 0.0 0.0 0.0 3.481362441963327 3.481362441963327 3.481362441963327 3.481362441963327 0 1.8807196863200843 2.0 0.0 0.0 {[DA]|[EG]}DQQ[YE]V{I|L};{[SA]|[TG]}G[W{M(Oxidation (M))|F}]DWV{I|L};WD[HT][Y{M(Oxidation (M))|F}]V{I|L};{[SA]|[TG]}G[W{M(Oxidation (M))|F}]DVW{I|L};{[DA]|[EG]}DQQ[Y{I|L}]D{I|L};{[DA]|[EG]}DQQ[YE]{I|L}V;{[QS]|[NT]}[W{M(Oxidation (M))|F}]DWV{I|L};{[SA]|[TG]}G[W{M(Oxidation (M))|F}]VDW{I|L};{[DA]|[EG]}{I|L}[HC]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}D{I|L};WD[HT][Y{M(Oxidation (M))|F}]{I|L}V 4.1806;3.8581;3.7436;3.116;3.059;2.791;2.7434;2.674;2.4192;2.354 -;-;-;-;-;-;-;-;-;- 380 + 1 1.762 65017.5 1.0 3380 4470 7850 HBL1_DMSO_200M_050219_2,7852 HBL1_DMSO_200M_050219_2,7852,DAIYGAGEDGI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7853 42.541 455.0 406760.0 25 0 28208.0 + 33366 SGIPEKDLHSV 11 174 394.5436867408933 1180.60923082288 3 394.5436889529228 MULTI CID FTMS 0 0 0 7850 155830.5 0.2347464005472829 -8 0.2153282165527343 3 Unmodified _SGIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 21.2413784809298 0.5933019168770548 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEKD{I|L}HSV 10 3 + 30.963 0.0 0.0 2.6227 2.6227 60.904 0.0 0.0 0.0 4.8001575643895045 0.2673608714622411 0.2673608714622411 0.2673608714622411 0 0.0 0.0 1.3441876774005248 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEKD{I|L}HSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[CA]|SS}HVWV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[CA]|SS}HVW{I|L}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[DG]HVWV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[DG]HVW{I|L}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[CA]|SS}HV{[DA]|[EG]}V{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VSHQ{I|L}HSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AAEHVWV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{M(Oxidation (M))|F}PQ{I|L}HSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RD]HVWV{I|L} 2.6227;2.6;2.4017;2.364;2.1657;2.0355;2.0329;2.0226;1.9994;1.9792 -;-;-;-;-;-;-;-;-;- 4805 + 1 1.762 149155.8 1.0 3381 4470 7850 HBL1_DMSO_200M_050219_2,7853 HBL1_DMSO_200M_050219_2,7853,SGIPEKDLHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7854 42.555 800.0 160130.0 25 0 8591.0 + 5660 DPFAGRNV 8 173 438.222395700159 874.430238467118 2 438.2234069705009 MULTI CID FTMS 0 0 0 7850 114262.8515625 0.9237040230414992 -2 0.0717086791992187 4 Unmodified _DPFAGRNV_ ENSG00000111877|ENST00000619706|MCM9;ENST00000436788.2_1_6:119234457-119238897:-|nuORF;nc|ENSG00000111877|Q9NXL9-2|MCM9;nc|ENSG00000111877|Q9NXL9-3|MCM9 28.486842064014134 0.4448922141344407 4 DP{M(Oxidation (M))|F}AVE{M(Oxidation (M))|F} 7 4 65.922 0.0 0.0 7.5389 0.0 0.0 0.0 66.03573023013905 66.03573023013905 54.81298874902095 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 DP{M(Oxidation (M))|F}AVE{M(Oxidation (M))|F} 7.5389 - 251 + 1 1.762 100708.2 0.6000000238418579 3382 4470 7850 HBL1_DMSO_200M_050219_2,7854 HBL1_DMSO_200M_050219_2,7854,DPFAGRNV False True DPFAGRNV 42.555123 438.223406970501 847761.9375 7850.0 nc|ENSG00000111877|Q9NXL9-3|MCM9;;nc|ENSG00000111877|Q9NXL9-2|MCM9;;ENSG00000111877|ENST00000619706|MCM9;;ENST00000436788.2_1_6:119234457-119238897:-|nuORF 5.426005760828654 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7856 42.56 4.1 12953000.0 25 0 1179000.0 + 24984 MPPPPPQGV 9 80 460.23852327962805 918.462493626056 2 460.2392150759697 MULTI CID FTMS 0 0 0 7855 13460288.0 0.7263249832209568 13 -0.46295166015625 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 56.541270873467816 0.0279970378729908 4 {[HG]|PP}MPP[QP]GV 9 2 {[HG]|PP}M + + 28.394 5.6864 1.7489 3.0915 3.0915 46.126 0.0 0.0 0.0 0.0 -4.001290800069128 -4.001290800069128 0.0 0 1.5 0.0 0.0 0.3807196863200844 {[HG]|PP}MPP[QP]GV 3.0915 - 161 + 1 1.76 48812.5 1.0 3383 4471 7855 HBL1_DMSO_200M_050219_2,7856 HBL1_DMSO_200M_050219_2,7856,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7857 42.561 71.0 965260.0 25 0 134990.0 + 43215 WALNWSLPV 9 69 543.2904189954048 1084.5662850576095 2 543.2910644412041 MULTI CID FTMS 0 0 0 7855 736652.6875 0.5546723767632163 -17 0.7008743286132812 2 Unmodified _WALNWSLPV_ REV__ENST00000473097.5_1_1:1288733-1289815:-|nuORF 15.847184025352805 0.4077185912009129 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE 4 -1 37.435 0.0 0.0 3.4516 0.0 0.0 0.0 598.3328531682577 598.3328531682577 30.445312593723983 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE 3.4516 - 19 + 1 1.76 57541.4 1.0 3384 4471 7855 HBL1_DMSO_200M_050219_2,7857 HBL1_DMSO_200M_050219_2,7857,WALNWSLPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7859 42.566 39.0 1159100.0 25 0 99168.0 + 18090 KTIETSPSL 9 65 488.2715517811069 974.5285506290136 2 488.2716247439384 MULTI CID FTMS 0 0 0 7858 1127739.5 0.5788802970013375 6 -0.2625999450683594 1 Unmodified _KTIETSPSL_ ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI 53.832793166522166 0.0319663582346103 4 STRPS{I|L} 6 5 44.066 0.0 0.0 4.5218 0.0 0.0 315.1803339635914 0.0 315.1803339635914 0.0 16.141755649463647 0.0 0.0 0 1.0 0.0 1.274227503252014 0.0 STRPS{I|L} 4.5218 - 505 + 1 1.76 42543.7 1.0 3385 4472 7858 HBL1_DMSO_200M_050219_2,7859 HBL1_DMSO_200M_050219_2,7859,KTIETSPSL True True KTIETSPSL 42.56571 488.271624743938 29342750.0 7858.0 nc|ENSG00000140525|Q9NVI1-2|FANCI;;nc|ENSG00000140525|Q9NVI1-1|FANCI;;ENSG00000140525|ENST00000310775|FANCI 4.9227298100789385 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7860 42.567 57.0 760720.0 25 0 61028.0 + -1 YADASVMKT 9 89 501.2332809763564 1000.4520090195128 2 501.2336913943291 MULTI CID FTMS 0 0 0 7858 617885.5625 0.5826488534519969 6 -0.2625999450683594 2 Oxidation (M) _YADASVM(Oxidation (M))KT_ REV__ENSG00000173786|ENST00000393892|CNP;REV__nc|ENSG00000173786|P09543-2|CNP 12.531546534597751 0.4974689918368763 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D 3 -1 26.739 0.0 0.0 2.6727 0.0 0.0 0.0 648.2994570998441 648.2994570998441 8.78022170376731 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D 2.6727 + + 78 1 1.76 39342.0 1.0 3386 4472 7858 HBL1_DMSO_200M_050219_2,7860 HBL1_DMSO_200M_050219_2,7860,YADASVMKT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7861 42.569 64.0 619430.0 25 0 75539.0 -1 MPPPPPQGV 9 76 468.2364995746263 0 468.2362853884697 PEAK CID FTMS 0 0 0 7858 540717.0 0.676775158864516 13 -0.5271492004394531 3 Oxidation (M) _M(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 26.34127834903884 0.1435854383732919 4 PP 2 -1 9.0237 0.0 0.0 0.96566 0.0 0.0 399.2120187225684 338.11838709049067 737.3304058130591 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 PP 0.96566 + + 73 + 1 1.76 36279.7 1.0 3387 4472 7858 HBL1_DMSO_200M_050219_2,7861 HBL1_DMSO_200M_050219_2,7861,MPPPPPQGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7862 42.572 188.0 434820.0 25 0 31770.0 + 21867 LPPEQVTKV 9 113 505.7971851353432 1009.5798173374864 2 505.7973205447197 MULTI CID FTMS 0 0 0 7858 293404.5625 0.796384939526901 8 -0.3528633117675781 4 Unmodified _LPPEQVTKV_ ENSG00000124920|ENST00000278836|MYRF;nc|ENSG00000124920|Q9Y2G1-2|MYRF 24.99096001346401 0.2132109383330889 4 {I|L}PP 3 6 48.94 0.0 0.0 4.8476 0.0 0.0 0.0 699.3687227838499 699.3687227838499 30.47991791481905 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PP 4.8476 + + 354 + 1 1.76 64298.2 1.0 3388 4472 7858 HBL1_DMSO_200M_050219_2,7862 HBL1_DMSO_200M_050219_2,7862,LPPEQVTKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7863 42.575 104.0 491200.0 25 0 40511.0 25008 MPPRGPASE 9 82 471.2300881821903 940.4456234311806 2 471.2296325564384 MULTI CID FTMS 0 0 0 7858 253918.171875 0.3356200757552914 11 -0.4317436218261719 5 Unmodified _MPPRGPASE_ ENSG00000262484|ENST00000571838|CCER2 13.90604991867851 0.4602628045680013 4 MPP 3 6 49.693 0.0 0.0 5.284 0.0 0.0 0.0 612.2769869440061 612.2769869440061 39.41515096531488 0.0 0.0 0.0 0 0.6505149978319906 1.6989700043360187 0.0 0.0 + MPP 5.284 + + 153 + 1 1.76 48368.9 1.0 3389 4472 7858 HBL1_DMSO_200M_050219_2,7863 HBL1_DMSO_200M_050219_2,7863,MPPRGPASE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7864 42.579 231.0 731120.0 25 0 130870.0 + 283 ADLNGPKL 8 120 414.23447368183207 826.4543944304642 2 414.2350341677666 MULTI CID FTMS 0 0 0 7858 192707.5625 0.0611178215443918 -8 0.2020530700683593 6 Unmodified _ADLNGPKL_ REV__ENSG00000020577|ENST00000554335|SAMD4A;REV__ENST00000555112.1_1_14:55034634-55169324:+|nuORF;REV__ENST00000557013.1_1_14:55168817-55201659:+|nuORF;REV__nc|ENSG00000020577|Q9UPU9-3|SAMD4A 11.640296217721598 0.738950129755968 4 {[QV]|[N{I|L}]|[RA]|[KV]}EAQ[PG]V 8 -1 + 16.502 0.0 0.0 1.9967 1.9967 70.796 0.0 0.0 0.0 3.737813714317973 1.2860791218225387 1.2860791218225387 6.989700043360188 0 0.8979400086720375 0.8860566476931632 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}EAQ[PG]V;{[QV]|[N{I|L}]|[RA]|[KV]}EAQ[VG]P;{[QV]|[N{I|L}]|[RA]|[KV]}HH[HA]V 1.9967;1.151;0.053648 -;-;- 231 + 1 1.76 133458.3 1.0 3390 4472 7858 HBL1_DMSO_200M_050219_2,7864 HBL1_DMSO_200M_050219_2,7864,ADLNGPKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7865 42.586 399.0 222340.0 25 0 15646.0 21882 LPPESTQV 8 118 435.7319671401997 869.4493813471995 2 435.7323791384697 MULTI CID FTMS 0 0 0 7858 172307.953125 0.5304105249153788 16 -0.5802955627441406 7 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 28.17323086031832 0.4514957916281387 4 {NN|[MP]|[D{I|L}]|[EV]}G[HA]{I|L} 6 7 27.283 0.0 0.0 3.1379 0.0 0.0 0.0 260.12538167362453 260.12538167362453 -0.6099224912845891 0.0 -0.6099224912845891 0.0 0 0.4247425010840047 0.744727494896694 0.9456290139465234 0.2742275032520141 {NN|[MP]|[D{I|L}]|[EV]}G[HA]{I|L} 3.1379 - 355 1 1.76 70428.3 1.0 3391 4472 7858 HBL1_DMSO_200M_050219_2,7865 HBL1_DMSO_200M_050219_2,7865,LPPESTQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7866 42.6 800.0 178380.0 25 0 12403.0 + 16489 KALETLRQV 9 166 529.321548573914 1056.628544214628 2 529.3219482302666 MULTI CID FTMS 0 0 0 7858 139708.34375 1.0 0 0.0 8 Unmodified _KALETLRQV_ ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-2|RAD50;nc|ENSG00000113522|Q92878-3|RAD50 61.60191391372663 0.0251951588191061 4 KA{I|L}ET{I|L}RQV 9 0 + 64.648 0.0 0.0 6.1183 6.1183 72.57 0.0 0.0 0.0 16.478174818886366 0.1378828448563354 0.1378828448563354 0.1378828448563354 0 1.6421590589602533 0.0 0.7742275032520141 0.5554621874040891 + + KA{I|L}ET{I|L}RQV;KA{I|L}ET{I|L}RN{I|L};KA{I|L}ET{I|L}R[AG]V;KA{I|L}ET{I|L}RGG{I|L};[{I|L}T]VQT{I|L}RQV;V[{I|L}T]QT{I|L}RQV;V[{I|L}T]QT{I|L}RN{I|L};[{I|L}T]VQT{I|L}RN{I|L};KV[DV]T{I|L}RQV;KV[DV]T{I|L}RN{I|L} 6.1183;6.1053;5.029;5.0159;2.6984;2.6984;2.6853;2.6853;2.5138;2.5007 +;-;-;-;-;-;-;-;-;- + 1271 + 1 1.76 115887.4 0.6899999976158142 3392 4472 7858 HBL1_DMSO_200M_050219_2,7866 HBL1_DMSO_200M_050219_2,7866,KALETLRQV True True KALETLRQV 42.59981 529.321948230267 843100.75 7858.0 nc|ENSG00000113522|Q92878-2|RAD50;;nc|ENSG00000113522|Q92878-3|RAD50;;ENSG00000113522|ENST00000378823|RAD50 6.321928819020589 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7868 42.604 8.7 5706400.0 25 0 1376500.0 + 2632 ASVPKVETV 9 62 465.26844440862754 928.5223358840552 2 465.2686645388603 MULTI CID FTMS 0 0 0 7867 6809136.5 0.7178872103614067 -4 0.1092300415039062 1 Unmodified _ASVPKVETV_ ENSG00000100664|ENST00000216554|EIF5 30.63653989081413 0.1413794767160703 4 [KP]VETV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 5 + 32.88 0.0 0.0 3.5411 3.5411 70.622 0.0 0.0 0.0 2.710667722865381 -1.5882570711737287 -1.5882570711737287 4.414543788274798 0 0.0 0.0 0.3494850021680094 0.0 [KP]VETV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PK{NN|[MP]|[D{I|L}]|[EV]}TV;{NN|[MP]|[D{I|L}]|[EV]}KPTV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP]VEVT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}T[KP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}E[KP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}[VG]{[VA]|[{I|L}G]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}KPVT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[VS][TP]{[VA]|[{I|L}G]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}[PS]{[VA]|[{I|L}G]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.5411;3.0657;2.7579;2.3267;2.2194;1.7056;1.5461;1.5435;1.0992;1.0323 -;-;-;-;-;-;-;-;-;- 178 1 1.76 45187.0 1.0 3393 4473 7867 HBL1_DMSO_200M_050219_2,7868 HBL1_DMSO_200M_050219_2,7868,ASVPKVETV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7869 42.605 22.0 2223100.0 25 0 583490.0 + 38818 TVFSHAQTV 9 75 495.25659498857146 988.498637043943 2 495.2566406130791 MULTI CID FTMS 0 0 0 7867 2264433.0 0.3203653333938855 5 -0.2239875793457031 2 Unmodified _TVFSHAQTV_ ENSG00000177954|ENST00000651669|RPS27;ENSG00000185088|ENST00000330964|RPS27L;ENST00000482846.1_1_15:63447754-63448774:-|nuORF 31.26834338654808 0.1333407332142048 4 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DP]V{[TV]|[{I|L}S]} 9 5 + 39.216 0.0 0.0 3.9672 3.9672 64.21 0.0 0.0 0.0 0.2802872360024366 5.6424927368726046 0.2802872360024366 0.2802872360024366 0 0.8807196863200843 2.0 0.8807196863200843 0.5 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DP]V{[TV]|[{I|L}S]};[HA]YAQTV{[TV]|[{I|L}S]};[HA]S{M(Oxidation (M))|F}QTV{[TV]|[{I|L}S]};[HA]YA[AG]TV{[TV]|[{I|L}S]};[HA]S{M(Oxidation (M))|F}[AG]TV{[TV]|[{I|L}S]};[HA]YA{[TV]|[{I|L}S]}Q{[TV]|[{I|L}S]};[HA]YA[KA]E{[TV]|[{I|L}S]};[HA]S{M(Oxidation (M))|F}{[TV]|[{I|L}S]}Q{[TV]|[{I|L}S]};[HV]V{[SA]|[TG]}[YN]TV;[HA]S{M(Oxidation (M))|F}[KA]E{[TV]|[{I|L}S]} 3.9672;3.9389;3.4562;3.0073;2.5247;2.0188;1.7143;1.5362;1.269;1.2316 -;-;-;-;-;-;-;-;-;- 172 1 1.76 43784.1 1.0 3394 4473 7867 HBL1_DMSO_200M_050219_2,7869 HBL1_DMSO_200M_050219_2,7869,TVFSHAQTV False True TVFSHAQTV 42.605501 495.256640613079 105702608.0 7867.0 ENSG00000185088|ENST00000330964|RPS27L;;ENSG00000177954|ENST00000651669|RPS27;;ENST00000482846.1_1_15:63447754-63448774:-|nuORF 7.157340367635091 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7870 42.607 59.0 859760.0 25 0 53929.0 + 24242 MAPKPGPYV 9 81 480.25373291300207 958.4929128928042 2 480.2545959353447 MULTI CID FTMS 0 0 0 7867 353344.75 1.0 0 0.0 3 Unmodified _MAPKPGPYV_ ENSG00000131236|ENST00000372805|CAP1;nc|ENSG00000131236|Q01518-2|CAP1 24.67388899826682 0.2172451872415813 4 {[DS]|[MA]|[CV]|TT}PK[WE]VV 8 4 + 46.643 0.0 0.0 4.8663 4.8663 82.214 0.0 0.0 0.0 29.64333124107817 9.208187539523747 9.208187539523747 10.05395031886706 0 0.4247425010840047 2.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}PK[WE]VV;{[DS]|[MA]|[CV]|TT}PK[PG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YT]VV 4.8663;3.8174;0.51065 -;+;- + 63 + 1 1.76 45992.7 1.0 3395 4473 7867 HBL1_DMSO_200M_050219_2,7870 HBL1_DMSO_200M_050219_2,7870,MAPKPGPYV False True MAPKPGPYV 42.60697 480.254595935345 6783129.0 7867.0 ENSG00000131236|ENST00000372805|CAP1;;nc|ENSG00000131236|Q01518-2|CAP1 7.654202938079834 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7871 42.609 114.0 411480.0 25 0 45800.0 -1 QPPPKCPI 8 82 468.7532287631016 935.4919045930033 2 468.7525817751884 MULTI CID FTMS 0 0 0 7867 354132.75 0.8220266997597953 11 -0.4182014465332031 4 Carbamidomethyl (C) _QPPPKC(Carbamidomethyl (C))PI_ ENSG00000187170|ENST00000368777|LCE4A 12.531546534597751 0.7257836412119636 4 [QP]PP 4 -1 21.114 0.0 0.0 2.257 0.0 0.0 0.0 513.2520418823187 513.2520418823187 6.165827977365623 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3494850021680094 [QP]PP 2.257 + + 88 1 1.76 46126.9 1.0 3396 4473 7867 HBL1_DMSO_200M_050219_2,7871 HBL1_DMSO_200M_050219_2,7871,QPPPKCPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7872 42.616 383.0 203570.0 25 0 15310.0 + 31916 RTYADYESV 9 104 552.2535318478836 1102.492510762567 2 552.2534667849541 MULTI CID FTMS 0 0 0 7867 168656.484375 0.5414931464641108 -2 0.0447502136230468 5 Unmodified _RTYADYESV_ ENSG00000100632|ENST00000557016|ERH;ENST00000523006.1_1_7:139218986-139219103:+|nuORF 38.17557092003332 0.0854718145212029 4 [YE][WK]YESV 8 4 + 53.025 0.0 0.0 4.8096 4.8096 71.68 0.0 0.0 0.0 0.1793810893175162 37.58544105163671 0.1793810893175162 2.525749891599532 0 0.9247425010840048 0.0 0.7887254899964358 0.3494850021680094 [YE][WK]YESV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WWYESV;[YE][WK]YTDV;[MT]TM{M(Oxidation (M))|F}{[WT]|[RM]}SV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WWYTDV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WM]{[MS]|[{M(Oxidation (M))|F}A]}ESV;{[CT]|[{M(Oxidation (M))|F}G]}EM{M(Oxidation (M))|F}{[WT]|[RM]}SV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WM]{[MS]|[{M(Oxidation (M))|F}A]}TDV;[DP]Y{[NV]|[RG]}[Y{M(Oxidation (M))|F}]SV;[YE]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[YR]DV 4.8096;4.5805;4.4283;3.9169;3.8539;3.5005;3.3911;2.7739;2.5268;1.716 -;-;-;-;-;-;-;-;-;- 279 1 1.76 64279.6 1.0 3397 4473 7867 HBL1_DMSO_200M_050219_2,7872 HBL1_DMSO_200M_050219_2,7872,RTYADYESV True True RTYADYESV 42.616224 552.253466784954 2015188.75 7867.0 ENST00000523006.1_1_7:139218986-139219103:+|nuORF;;ENSG00000100632|ENST00000557016|ERH 2.6939566135406494 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7873 42.63 800.0 183830.0 25 0 21199.0 + 33368 SGIPEKDLHSV 11 124 591.3117058555949 1180.6088587779898 2 591.3117553591728 MULTI CID FTMS 0 0 0 7867 153400.265625 0.399930300729337 -4 0.1092300415039062 6 Unmodified _SGIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 64.86049521808526 0.0494191392184129 4 [EP]KD{I|L}HSVASV 11 6 + 68.642 0.0 0.0 5.8141 5.8141 75.963 0.0 0.0 0.0 1.2604625132690472 41.36962104224865 1.2604625132690472 2.5436480540244872 0 0.9489700043360187 1.5228787452803376 0.8754223615525999 0.0 [EP]KD{I|L}HSVASV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VSHQ{I|L}HSV;{[TV]|[{I|L}S]}GPD{I|L}HSVASV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VSQH{I|L}HSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{I|L}HSVASV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VSH[AG]{I|L}HSV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WHQ{I|L}HSV;[SG]{I|L}PD{I|L}HSVASV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VS[AG]H{I|L}HSV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WQH{I|L}HSV 5.8141;5.5987;5.5751;5.5166;5.2845;4.8224;4.7699;4.7614;4.7403;4.6878 -;-;-;-;-;-;-;-;-;- 5461 1 1.76 112661.9 0.7200000286102295 3398 4473 7867 HBL1_DMSO_200M_050219_2,7873 HBL1_DMSO_200M_050219_2,7873,SGIPEKDLHSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7874 42.644 800.0 152010.0 25 0 13349.0 + -1 SSCKYCTWR 9 111 595.7579047211979 1189.5012565091956 2 595.7584716677666 MULTI CID FTMS 0 0 0 7867 115378.46875 0.6368883179529659 -4 0.1092300415039062 7 Carbamidomethyl (C) _SSC(Carbamidomethyl (C))KYCTWR_ REV__ENSG00000156931|ENST00000625842|VPS8;REV__ENST00000492449.5_1_3:184603882-184769810:+|nuORF;REV__nc|ENSG00000156931|Q8N3P4-2|VPS8;REV__nc|ENSG00000156931|Q8N3P4-3|VPS8 4.3292370932331545 0.7635526921153418 4 DSS[HC]K{M(Oxidation (M))|F}{I|L}R 9 -1 43.37 0.0 0.0 3.6461 0.0 0.0 97.97491480951436 0.0 97.97491480951436 0.0 34.518440961331294 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.3807196863200844 DSS[HC]K{M(Oxidation (M))|F}{I|L}R 3.6461 - 131 + 1 1.76 93563.2 0.6399999856948853 3399 4473 7867 HBL1_DMSO_200M_050219_2,7874 HBL1_DMSO_200M_050219_2,7874,SSCKYCTWR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7875 42.658 800.0 248000.0 25 0 28120.0 + 20940 LNEYKSNEM 9 161 564.2552530509421 1126.495953168684 2 564.2564575076103 MULTI CID FTMS 0 0 0 7867 117761.4765625 0.1018159198966204 -6 0.1702156066894531 8 Unmodified _LNEYKSNEM_ ENSG00000087495|ENST00000371015|PHACTR3;nc|ENSG00000087495|Q96KR7-2|PHACTR3;nc|ENSG00000087495|Q96KR7-3|PHACTR3;nc|ENSG00000087495|Q96KR7-4|PHACTR3 56.17704186161178 0.0281986971544335 4 {[YD]|[{M(Oxidation (M))|F}M]}[KS]Q{I|L}NEM 9 5 + 93.45 0.0 0.0 8.2956 8.2956 86.266 0.0 0.0 0.0 9.452430961214446 14.09256854528806 9.452430961214446 4.119543704721593 0 1.3807196863200843 2.0 2.0495462078546405 0.805462187404089 {[YD]|[{M(Oxidation (M))|F}M]}[KS]Q{I|L}NEM;{[YD]|[{M(Oxidation (M))|F}M]}N[KT]{I|L}NEM;{[YD]|[{M(Oxidation (M))|F}M]}[KS][AG]{I|L}NEM;{[YD]|[{M(Oxidation (M))|F}M]}[KS]Q{I|L}GGEM;{[QV]|[N{I|L}]|[RA]|[KV]}{[YC]|[HE]}Q{I|L}NEM;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}[KT]NEM;{[YD]|[{M(Oxidation (M))|F}M]}N[KT]{I|L}GGEM;{[YD]|[{M(Oxidation (M))|F}M]}GG[KT]{I|L}NEM;{[QV]|[N{I|L}]|[RA]|[KV]}Q{[YC]|[HE]}{I|L}NEM;{[QV]|[N{I|L}]|[RA]|[KV]}{[YC]|[HE]}Q{I|L}GGEM 8.2956;7.9299;7.4782;7.4782;7.4565;7.1254;7.1125;7.1125;7.0572;6.6391 -;-;-;-;-;-;-;-;-;- 4426 1 1.76 149711.0 0.6600000262260437 3400 4473 7867 HBL1_DMSO_200M_050219_2,7875 HBL1_DMSO_200M_050219_2,7875,LNEYKSNEM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7877 42.663 136.0 643530.0 25 0 78241.0 + 4981 DGRQFPKV 8 117 316.1753352609141 945.5041763829424 3 316.1750671267509 MULTI CID FTMS 0 0 0 7876 444191.0625 0.8429544658792987 4 -0.1660614013671875 1 Unmodified _DGRQFPKV_ ENSG00000111641|ENST00000322166|NOP2;ENST00000536506.5_1_12:6669839-6672276:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 19.256988751693697 0.6264283240490721 4 [KP]CQ{M(Oxidation (M))|F} 5 6 14.961 0.0 0.0 1.5823 0.0 0.0 0.0 339.2081918460862 339.2081918460862 1.2709095578939138 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [KP]CQ{M(Oxidation (M))|F} 1.5823 - 123 1 1.76 74513.1 1.0 3401 4474 7876 HBL1_DMSO_200M_050219_2,7877 HBL1_DMSO_200M_050219_2,7877,DGRQFPKV False True DGRQFPKV 42.662751 316.175067126751 13052651.0 7876.0 ENSG00000111641|ENST00000322166|NOP2;;nc|ENSG00000111641|P46087-2|NOP2;;ENST00000536506.5_1_12:6669839-6672276:-|nuORF;;nc|ENSG00000111641|P46087-4|NOP2;;nc|ENSG00000111641|P46087-3|NOP2 2.013582468032837 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7878 42.677 800.0 117750.0 25 0 6010.3 + 28669 PVPEALSDESP 11 125 570.7732002021908 1139.5318474711814 2 570.7733032107353 MULTI CID FTMS 0 0 0 7876 66720.390625 0.2430336155603255 9 -0.335205078125 2 Unmodified _PVPEALSDESP_ REV__ENSG00000167566|ENST00000335999|NCKAP5L;REV__nc|ENSG00000167566|Q9HCH0-2|NCKAP5L 27.628801355627647 0.4434699450731472 4 [PS]{[{M(Oxidation (M))|F}D]|MM}TVSSTTV 11 -1 + 59.082 0.0 0.0 5.1848 5.1848 72.67 0.0 0.0 0.0 1.6410528487555496 45.642591845466455 1.6410528487555496 2.188105454342804 0 0.4247425010840047 0.5528419686577808 1.2887254899964358 0.0 [PS]{[{M(Oxidation (M))|F}D]|MM}TVSSTTV;[PS]VM[MT]SSTTV;[VP]SM[MT]SSTTV;[PS]{[{M(Oxidation (M))|F}D]|MM}TVQ{M(Oxidation (M))|F}TV;[PS]VM[MT]Q{M(Oxidation (M))|F}TV;[VP]PY[CS]SSTTV;[PS]V[RD]{[YC]|[HE]}TTV;[VP]SM[MT]Q{M(Oxidation (M))|F}TV;[VP]S[RD]{[YC]|[HE]}TTV;[VP]PY[CS]Q{M(Oxidation (M))|F}TV 5.1848;4.9927;4.3674;3.6691;3.477;3.3482;3.0058;2.8517;2.3805;1.8325 -;-;-;-;-;-;-;-;-;- 483 1 1.76 75789.6 0.6800000071525574 3402 4474 7876 HBL1_DMSO_200M_050219_2,7878 HBL1_DMSO_200M_050219_2,7878,PVPEALSDESP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7880 42.681 8.2 6129500.0 25 0 1097200.0 + 2190 AQAPDLQRV 9 56 499.2749073758181 996.5352618184362 2 499.2751953005791 MULTI CID FTMS 0 0 0 7879 7236674.0 0.1533781030209789 15 -0.5124969482421875 1 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 53.832793166522166 0.0319663582346103 4 [QA]APD{I|L}Q[RV] 9 0 + 65.313 0.0 0.0 6.554 6.554 87.797 0.0 0.0 0.0 52.54867748893542 4.762036441594191 4.762036441594191 9.208187539523747 0 1.0 1.0457574905606752 0.0 0.7742275032520141 + + [QA]APD{I|L}Q[RV];[QA]APD{I|L}[AG][RV];[QA]AV[EP]Q[RV];[QA]AV[EP][AG][RV];[QA]VA[EP]Q[RV];[QA]VA[EP][AG][RV] 6.554;5.63;4.3217;3.3977;2.915;1.991 +;-;-;-;-;- + 64 + 1 1.76 44686.7 1.0 3403 4475 7879 HBL1_DMSO_200M_050219_2,7880 HBL1_DMSO_200M_050219_2,7880,AQAPDLQRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7881 42.683 85.0 618210.0 25 0 71235.0 + 6676 EAYLGKTV 8 81 440.742217740185 879.4698825471701 2 440.7421752810478 MULTI CID FTMS 0 0 0 7879 558718.5 0.121749274529531 9 -0.3413581848144531 2 Unmodified _EAYLGKTV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000456928.2_1_12:4206979-4207195:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 46.020951573049366 0.1579632664462935 4 {[CP]|[EA]}Y{I|L}GKTV 8 0 {[CP]|[EA]}Y + + 22.076 8.543 2.3525 2.5101 2.5101 45.111 0.0 0.0 0.0 0.0 0.3187910468242414 0.0 0.0 0 0.2887254899964357 0.0 0.7742275032520141 0.0 + + {[CP]|[EA]}Y{I|L}GKTV 2.5101 + + 114 + 1 1.76 46359.3 1.0 3404 4475 7879 HBL1_DMSO_200M_050219_2,7881 HBL1_DMSO_200M_050219_2,7881,EAYLGKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7882 42.685 106.0 569690.0 25 0 49446.0 + 11241 KVSSGFSGV 9 86 434.2319441990056 866.4493354648113 2 434.2323791384697 MULTI CID FTMS 0 0 0 7879 435990.34375 0.4928979366366234 -3 0.1154556274414062 3 Unmodified _GERGHRGV_ nc|ENSG00000137193|P11309-2|PIM1;ENSG00000137193|ENST00000373509|PIM1 14.581692164780916 0.6954967302934248 4 CRGV 4 5 27.964 0.0 0.0 3.2274 0.0 0.0 433.2459582288275 0.0 433.2459582288275 0.0 14.891915987517091 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 CRGV 3.2274 - 68 + 1 1.76 55175.8 1.0 3405 4475 7879 HBL1_DMSO_200M_050219_2,7882 HBL1_DMSO_200M_050219_2,7882,GERGHRGV False False KVSSGFSGV 42.685309 434.23237913847 12514260.0 7879.0 nc|ENSG00000137193|P11309-2|PIM1;;ENSG00000137193|ENST00000373509|PIM1 0.981891711552938 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7883 42.699 800.0 227490.0 25 0 45871.0 + 44838 YPNVGKSSTI 10 180 533.2836090753219 1064.5526652174435 2 533.2835571169853 MULTI CID FTMS 0 0 0 7879 102014.6875 0.4812201183256629 -13 0.3806724548339844 4 Unmodified _YPNVGKSSTI_ ENSG00000041802|ENST00000265245|LSG1;ENST00000466391.1_1_3:194371468-194371945:-|nuORF 49.52724829834842 0.0829255630816734 4 YPNV[{I|L}P]AVQ 9 6 64.409 0.0 0.0 6.0503 0.0 0.0 0.0 80.01482568912343 80.01482568912343 41.35811529443016 0.0 0.0 0.0 0 0.9361818737241736 1.6989700043360187 0.0 0.6989700043360187 YPNV[{I|L}P]AVQ 6.0503 - 2655 + 1 1.76 143728.6 0.5899999737739563 3406 4475 7879 HBL1_DMSO_200M_050219_2,7883 HBL1_DMSO_200M_050219_2,7883,YPNVGKSSTI True True YPNVGKSSTI 42.699143 533.283557116985 3660627.75 7879.0 ENSG00000041802|ENST00000265245|LSG1;;ENST00000466391.1_1_3:194371468-194371945:-|nuORF 5.030116399129232 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7884 42.713 785.0 285580.0 25 0 15930.0 32477 SAIRQKFPF 9 197 365.2084484080427 1092.6035158243285 3 365.2072631716728 MULTI CID FTMS 0 0 0 7879 95560.90625 0.3810912289418816 -2 0.07684326171875 5 Unmodified _SAIRQKFPF_ ENSG00000129317|ENST00000344862|PUS7L 26.268140514670165 0.1969607489560049 4 SAYRT{I|L}{I|L}NR 9 6 + 71.42 0.0 0.0 6.5367 6.5367 85.937 0.0 0.0 0.0 56.471510254408514 3.4678748622465605 3.4678748622465605 8.195439355418685 0 0.4274913471593705 2.0 0.0 0.7302046884880937 SAYRT{I|L}{I|L}NR;SAYRT{I|L}[RN]{I|L};SAYRT{I|L}{I|L}GGR;SAYEK{I|L}{I|L}NR;SAY[VG]T{I|L}{I|L}NR;SAYRT{I|L}[KG]TP;SAYR[R{I|L}]NT{I|L};SAYEK{I|L}[RN]{I|L};SAYRT{I|L}[KP]AS;SAYEK{I|L}{I|L}GGR 6.5367;5.7866;5.6939;5.4603;5.3297;5.041;4.96;4.7102;4.6798;4.6175 -;-;-;-;-;-;-;-;-;- 404 + 1 1.76 179054.0 1.0 3407 4475 7879 HBL1_DMSO_200M_050219_2,7884 HBL1_DMSO_200M_050219_2,7884,SAIRQKFPF False True SAYRTLNRI 42.712701 365.207263171673 1440268.5 7879.0 ENSG00000266472|ENST00000614145|MRPS21 2.0941423575083413 3.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7886 42.718 124.0 722600.0 25 0 212430.0 + 21144 LPARGFREV 9 58 522.8007703496495 1043.586987766099 2 522.8013183474541 MULTI CID FTMS 0 0 0 7885 485776.15625 0.7727441698338988 1 -0.0566062927246093 1 Unmodified _LPARGFREV_ ENSG00000096080|ENST00000372133|MRPS18A;nc|ENSG00000096080|Q9NVS2-2|MRPS18A;nc|ENSG00000096080|Q9NVS2-3|MRPS18A 19.256988751693697 0.3154191944385105 4 VKA 3 8 26.995 0.0 0.0 2.5867 0.0 0.0 0.0 742.3629244440061 742.3629244440061 8.05462187404089 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 VKA 2.5867 - 20 + 1 1.76 74703.9 1.0 3408 4476 7885 HBL1_DMSO_200M_050219_2,7886 HBL1_DMSO_200M_050219_2,7886,LPARGFREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7887 42.731 800.0 306070.0 25 0 71829.0 + 31779 RSLAITRPL 9 169 513.8242902679607 1025.6340276027213 2 513.8249999880791 MULTI CID FTMS 0 0 0 7885 209754.265625 0.9625016302470024 2 -0.1110076904296875 2 Unmodified _RSLAITRPL_ ENSG00000109163|ENST00000226413|GNRHR;nc|ENSG00000109163|P30968-2|GNRHR 17.11289562659939 0.3734572693229295 4 [VG]VV 4 9 28.276 0.0 0.0 2.757 0.0 0.0 0.0 668.3738642208858 668.3738642208858 5.678644001908566 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.0 [VG]VV 2.757 - 570 + 1 1.76 191245.0 0.7599999904632568 3409 4476 7885 HBL1_DMSO_200M_050219_2,7887 HBL1_DMSO_200M_050219_2,7887,RSLAITRPL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7888 42.733 75.0 1422300.0 25 0 267340.0 18565 LAAKAAGV 8 105 350.7213170772315 699.428081221263 2 350.7210571169853 MULTI CID FTMS 0 0 0 7885 929720.5 0.1919881559321627 -4 0.1515922546386718 3 Unmodified _LAAKAAGV_ ENSG00000104714|ENST00000262109|ERICH1 10.183394434864962 0.7604730176254005 4 [{I|L}A]{I|L}ERV 6 5 + 55.367 0.0 0.0 7.916 7.916 84.972 0.0 0.0 0.0 26.478174818886373 3.679767852945943 3.679767852945943 3.679767852945943 0 0.4247425010840047 2.0 0.0 0.3494850021680094 [{I|L}A]{I|L}ERV;[{I|L}A]{I|L}EVR;[{I|L}A]V{I|L}ER;[{I|L}A]{I|L}VER 7.916;7.3899;7.1035;6.2081 -;-;-;- 67 + 1 1.76 84823.4 1.0 3410 4476 7885 HBL1_DMSO_200M_050219_2,7888 HBL1_DMSO_200M_050219_2,7888,LAAKAAGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7889 42.739 301.0 229880.0 25 0 22475.0 13194 HGGKHGGG 8 84 706.3401685578453 705.3328920912453 1 706.3403198122978 MULTI CID FTMS 0 0 0 7885 301952.6875 0.2323964122607931 9 -0.3755569458007812 4 Unmodified _HGGKHGGG_ ENSG00000214819|ENST00000399044|CDRT15L2 0.6903765706972694 0.8201419426409876 4 [W{I|L}]TESA 6 8 + 64.887 0.0 0.0 9.1995 9.1995 79.831 0.0 0.0 0.0 0.0591597954944802 0.0591597954944802 0.0591597954944802 0.0591597954944802 0 1.1549471895720984 1.5228787452803376 1.3494850021680094 0.0 [W{I|L}]TESA;{I|L}WTESA;[W{I|L}]TTDA;{[ET]|[MV]}W{I|L}SA;{[WT]|[RM]}{I|L}ESA;{[ET]|[MV]}SAW{I|L};{[ET]|[MV]}SW{I|L}A;{[WT]|[RM]}E{I|L}SA;{[ET]|[MV]}WS{I|L}A;[W{I|L}][WM]A 9.1995;9.1912;7.7881;5.7717;5.3025;4.6242;4.3421;4.2029;4.1991;3.9319 -;-;-;-;-;-;-;-;-;- 387 1 1.76 53947.9 1.0 3411 4476 7885 HBL1_DMSO_200M_050219_2,7889 HBL1_DMSO_200M_050219_2,7889,HGGKHGGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7890 42.743 246.0 891590.0 25 0 88384.0 + 33584 SINSRFAKV 9 164 341.1977598371467 1020.5714501116402 3 341.1973449587822 MULTI CID FTMS 0 0 0 7885 225929.09375 0.2478219139624908 -3 0.1129798889160156 5 Unmodified _SINSRFAKV_ ENSG00000171311|ENST00000370902|EXOSC1;ENST00000471049.5_1_10:99197505-99205308:-|nuORF;ENST00000472345.5_1_10:99197505-99205641:-|nuORF;ENST00000476234.5_1_10:99200926-99205742:-|nuORF 23.78978130925829 0.2284941198415988 4 {[TV]|[{I|L}S]}VK[NS]{M(Oxidation (M))|F}KV 9 4 + 53.662 0.0 0.0 5.258 5.258 71.659 0.0 0.0 0.0 27.147642715192504 3.904243831634986 3.904243831634986 1.5051499783199065 0 0.3494850021680094 2.0 0.9247425010840048 0.9247425010840048 {[TV]|[{I|L}S]}VK[NS]{M(Oxidation (M))|F}KV;{[TV]|[{I|L}S]}VN[KS]{M(Oxidation (M))|F}KV;{[TV]|[{I|L}S]}VK[NS]{M(Oxidation (M))|F}VK;{[TV]|[{I|L}S]}VN[KS]{M(Oxidation (M))|F}VK;{[TV]|[{I|L}S]}NV[KS]{M(Oxidation (M))|F}KV;{[TV]|[{I|L}S]}VGG[KS]{M(Oxidation (M))|F}KV;{[TV]|[{I|L}S]}NV[KS]{M(Oxidation (M))|F}VK;{[TV]|[{I|L}S]}VGG[KS]{M(Oxidation (M))|F}VK;{[TV]|[{I|L}S]}VN[R{M(Oxidation (M))|F}]SAK;{[TV]|[{I|L}S]}GGV[KS]{M(Oxidation (M))|F}KV 5.258;5.1106;4.8755;4.728;4.2269;4.2083;3.8443;3.8257;3.6925;3.3246 -;-;-;-;-;-;-;-;-;- 650 + 1 1.76 177230.3 1.0 3412 4476 7885 HBL1_DMSO_200M_050219_2,7890 HBL1_DMSO_200M_050219_2,7890,SINSRFAKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7891 42.747 198.0 241630.0 25 0 28133.0 -1 SFHMDTVVV 9 101 525.7480054555268 1049.4814579778536 2 525.7505981326103 MULTI CID FTMS 0 0 0 7885 214080.25 0.7566173680204246 -2 0.0550537109375 6 Oxidation (M) _SFHM(Oxidation (M))DTVVV_ ENSG00000171495|ENST00000399564|MROH2B;nc|ENSG00000171495|Q7Z745-2|MROH2B 16.942295170755138 0.3780752226737986 4 VV 2 -1 29.024 0.0 0.0 2.7655 0.0 0.0 833.3341171348833 0.0 833.3341171348833 0.0 13.310384486277798 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 VV 2.7655 + + 93 + 1 1.76 49639.1 1.0 3413 4476 7885 HBL1_DMSO_200M_050219_2,7891 HBL1_DMSO_200M_050219_2,7891,SFHMDTVVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7892 42.752 242.0 334730.0 25 0 28148.0 + 2116 APTPAQAQI 9 116 448.7451664676896 895.4757800021791 2 448.7451660037041 MULTI CID FTMS 0 0 0 7885 166100.09375 0.2757901410061394 -6 0.2014808654785156 7 Unmodified _APTPAQAQI_ ENSG00000165417|ENST00000553612|GTF2A1;ENST00000298173.7_1_14:81646569-81676264:-|nuORF;nc|ENSG00000165417|P52655-2|GTF2A1 54.773552608820026 0.0299037012502309 4 [PA][TP]AGAAQ{I|L} 10 2 + 27.99 0.0 0.0 3.1257 3.1257 62.378 0.0 0.0 0.0 3.212112250009657 12.505172640924805 3.212112250009657 0.5115252244738073 0 0.5796896906561032 0.9208187539523752 1.5114393726401687 0.0 [PA][TP]AGAAQ{I|L};[PA][TP]AQAQ{I|L};[PA][TP]QAAQ{I|L};[AG]A[TP]PAAQ{I|L};[QA][TP]PAAQ{I|L};[PA][QT]PAAQ{I|L};[AG]AA[RK][WH];[QA]A[RK][WH];[DP][KP]GAAQ{I|L};[DP][KP]QAQ{I|L} 3.1257;3.0686;2.9732;2.4317;2.3431;2.0025;1.5858;1.5108;1.1217;1.0706 -;+;-;-;-;-;-;-;-;- + 352 1 1.76 65421.4 1.0 3414 4476 7885 HBL1_DMSO_200M_050219_2,7892 HBL1_DMSO_200M_050219_2,7892,APTPAQAQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7893 42.76 476.0 164580.0 25 0 9026.9 + 17946 KQYGITGENV 10 137 554.7853062249402 1107.5560595166803 2 554.7848998904228 MULTI CID FTMS 0 0 0 7885 151019.5625 0.8735486162546303 -3 0.1129798889160156 8 Unmodified _KQYGITGENV_ ENSG00000108465|ENST00000338399|CDK5RAP3;nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 59.36838082759317 0.0382430275470746 4 [AG]KY{[VA]|[{I|L}G]}TGENV 11 3 + 53.589 0.0 0.0 4.8385 4.8385 68.983 0.0 0.0 0.0 1.0127481841050567 6.254775019983413 1.0127481841050567 1.0127481841050567 0 1.086696871556164 0.9208187539523752 0.3494850021680094 0.8829131673969606 [AG]KY{[VA]|[{I|L}G]}TGENV;[KQ]Y{[VA]|[{I|L}G]}TGENV;[KG]AY{[VA]|[{I|L}G]}TGENV;[KA]GY{[VA]|[{I|L}G]}TGENV;[AG]KY{[VA]|[{I|L}G]}TGEGGV;[KQ]Y{[VA]|[{I|L}G]}TGEGGV;{[SA]|[TG]}[R{M(Oxidation (M))|F}]KTGENV;[KG]AY{[VA]|[{I|L}G]}TGEGGV;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KTGENV;{[VA]|[{I|L}G]}[YQ]KTGENV 4.8385;4.7471;4.4792;4.1287;4.0143;3.9196;3.7388;3.655;3.5955;3.5281 -;+;-;-;-;-;-;-;-;- + 1141 1 1.76 66109.3 1.0 3415 4476 7885 HBL1_DMSO_200M_050219_2,7893 HBL1_DMSO_200M_050219_2,7893,KQYGITGENV True True KQYGITGENV 42.760026 554.784899890423 1569780.125 7885.0 nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;;ENSG00000108465|ENST00000338399|CDK5RAP3;;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 6.049765586853027 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7894 42.769 532.0 280580.0 25 0 15111.0 + 26351 NSIKKLSTI 9 163 502.3096906152185 1002.6048282972372 2 502.3108093142509 MULTI CID FTMS 0 0 0 7885 145877.640625 0.6875320065541175 -2 0.0550537109375 9 Unmodified _NSIKKLSTI_ ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000468280.5_1_19:52693376-52714746:+|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 55.23464941255904 0.0288927259679799 4 [NS]{I|L}KK{I|L}ST{I|L} 9 0 + 57.8 0.0 0.0 5.765 5.765 82.27 0.0 0.0 0.0 24.880388454840528 14.09256854528806 14.09256854528806 7.367869231686804 0 1.6791746928241125 1.2218487496163564 0.6861818737241735 0.0 + + [NS]{I|L}KK{I|L}ST{I|L};{I|L}SNKK{I|L}ST{I|L};[YR]VV[RP]T{I|L} 5.765;5.0301;0.83701 +;-;- + 544 + 1 1.76 117923.8 1.0 3416 4476 7885 HBL1_DMSO_200M_050219_2,7894 HBL1_DMSO_200M_050219_2,7894,NSIKKLSTI True True NSIKKLSTI 42.769367 502.310809314251 1267605.125 7885.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000468280.5_1_19:52693376-52714746:+|nuORF;;nc|ENSG00000137713|P30154-5|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 4.434695323308309 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7896 42.774 26.0 2730400.0 25 0 538970.0 + 23925 LVPLMKQCL 9 66 348.8699633379118 1043.5880606139356 3 348.8697692751884 MULTI CID FTMS 0 0 0 7895 2023522.25 0.8401687377418352 3 -0.1446647644042968 1 Unmodified _LVPLMKQCL_ REV__ENST00000355689.5_1_2:178481615-178481684:-|nuORF 11.640296217721598 0.521594087909532 4 {I|L}VPQ 4 -1 40.433 0.0 0.0 3.8744 0.0 0.0 0.0 603.2898054513951 603.2898054513951 29.595594845372403 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 {I|L}VPQ 3.8744 - 23 + 1 1.766 65589.9 1.0 3417 4477 7895 HBL1_DMSO_200M_050219_2,7896 HBL1_DMSO_200M_050219_2,7896,LVPLMKQCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7897 42.775 22.0 3228000.0 25 0 350620.0 + 43225 WAPIRDGASI 10 85 362.5294940101128 1084.5666526305386 3 362.5293151736259 MULTI CID FTMS 0 0 0 7895 2416382.75 0.7981539502775342 -10 0.3398017883300781 2 Unmodified _WAPIRDGASI_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 17.11289562659939 0.5604042439455784 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 5 -1 45.234 0.0 0.0 4.1707 0.0 0.0 0.0 485.2483309381469 485.2483309381469 27.953715727355966 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.805462187404089 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 4.1707 - 67 + 1 1.766 66841.0 1.0 3418 4477 7895 HBL1_DMSO_200M_050219_2,7897 HBL1_DMSO_200M_050219_2,7897,WAPIRDGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7898 42.776 30.0 1815500.0 25 0 294210.0 + 21303 LPENSRGPF 9 54 508.76099627698153 1015.5074396207632 2 508.7634765505791 MULTI CID FTMS 0 0 0 7895 1873421.375 0.971753516189472 1 -0.0544013977050781 3 Unmodified _LPENSRGPF_ ENSG00000170558|ENST00000269141|CDH2;nc|ENSG00000170558|P19022-2|CDH2 32.78568957990786 0.1150597335874693 4 {I|L}PENSM 6 4 66.86 0.0 0.0 6.5839 0.0 0.0 0.0 341.1944674127563 341.1944674127563 39.41245036856159 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.4247425010840047 0.4247425010840047 {I|L}PENSM 6.5839 - 44 + 1 1.766 51195.6 1.0 3419 4477 7895 HBL1_DMSO_200M_050219_2,7898 HBL1_DMSO_200M_050219_2,7898,LPENSRGPF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7899 42.78 217.0 482270.0 25 0 65287.0 + 13892 HVQNMIKGV 9 105 513.2810972750474 1024.547641616895 2 513.2817870974541 MULTI CID FTMS 0 0 0 7895 279171.03125 0.3213357435055704 -3 0.1116600036621093 4 Unmodified _HVQNMIKGV_ ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000514842.5_1_4:39459094-39460113:-|nuORF;ENST00000561773.1_1_15:66671752-66672088:-|nuORF 54.773552608820026 0.0299037012502309 4 [HV]QNM{I|L} 6 3 54.543 0.0 0.0 5.3236 0.0 0.0 0.0 299.1708729884397 299.1708729884397 43.57386545501626 0.0 0.0 0.0 0 1.1861818737241734 1.5228787452803376 0.0 0.3807196863200844 + [HV]QNM{I|L} 5.3236 + + 225 1 1.766 84277.0 1.0 3420 4477 7895 HBL1_DMSO_200M_050219_2,7899 HBL1_DMSO_200M_050219_2,7899,HVQNMIKGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7900 42.782 83.0 464500.0 25 0 37795.0 + -1 SQPCAIASL 9 77 473.7365847800897 945.4586166269794 2 473.7368652224541 MULTI CID FTMS 0 0 0 7895 223163.8125 0.3674577365885044 -4 0.169586181640625 5 Carbamidomethyl (C) _SQPC(Carbamidomethyl (C))AIASL_ REV__ENSG00000179059|ENST00000326866|ZFP42 19.256988751693697 0.3154191944385105 4 {[QS]|[NT]}PTVG{M(Oxidation (M))|F}[NP] 9 -1 + 31.098 0.0 0.0 3.2891 3.2891 72.584 0.0 0.0 0.0 7.786596949921218 2.2430121199290944 2.2430121199290944 6.655462488490688 0 0.0 1.0 0.3807196863200844 0.0 {[QS]|[NT]}PTVG{M(Oxidation (M))|F}[NP];{[QS]|[NT]}P[YQ]{I|L}[NP];{[SA]|[TG]}A{M(Oxidation (M))|F}GVT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[SA]|[TG]}A{I|L}[YQ]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[VA]|[{I|L}G]}{[MS]|[{M(Oxidation (M))|F}A]}{[QS]|[NT]}{I|L}[NP];{[QS]|[NT]}V[TP]G{M(Oxidation (M))|F}[NP];{[VA]|[{I|L}G]}[SG][TP]G{M(Oxidation (M))|F}[NP];{[SA]|[TG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3.2891;2.5852;2.4656;1.7616;1.4375;1.2216;1.1191;0.75234 -;-;-;-;-;-;-;- 165 1 1.766 34902.3 1.0 3421 4477 7895 HBL1_DMSO_200M_050219_2,7900 HBL1_DMSO_200M_050219_2,7900,SQPCAIASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7901 42.796 800.0 98832.0 25 0 7719.1 + 17085 KLEQAQEMMK 10 111 634.3022502159794 1266.5899474987586 2 634.3030883669853 MULTI CID FTMS 0 0 0 7895 141955.71875 1.0 0 0.0 6 2 Oxidation (M) _KLEQAQEM(Oxidation (M))M(Oxidation (M))K_ ENSG00000164440|ENST00000358430|TXLNB 51.629811660486645 0.0705852162080619 4 E{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 9 6 73.899 0.0 0.0 5.8345 0.0 0.0 128.09546096015782 0.0 128.09546096015782 0.0 47.519123430258965 0.0 0.0 0 0.7614393726401688 0.0 2.059894379144197 1.2302046884880935 E{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 5.8345 - 1810 1 1.766 64708.6 0.6399999856948853 3422 4477 7895 HBL1_DMSO_200M_050219_2,7901 HBL1_DMSO_200M_050219_2,7901,KLEQAQEMMK True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7902 42.81 800.0 304070.0 25 0 18868.0 + 36531 TAHPRVLTV 9 236 331.865905898573 992.575888295919 3 331.8659850955009 MULTI CID FTMS 0 0 0 7895 107840.890625 0.4684094512086906 -2 0.092742919921875 7 Unmodified _TAHPRVLTV_ ENSG00000103168|ENST00000566732|TAF1C;ENST00000544090.5_1_16:84213937-84215086:-|nuORF;nc|ENSG00000103168|Q15572-4|TAF1C;ENST00000564208.5_1_16:84212549-84215086:-|nuORF;nc|ENSG00000103168|Q15572-2|TAF1C;nc|ENSG00000103168|Q15572|TAF1C;ENST00000564774.5_1_16:84214522-84215086:-|nuORF 31.26834338654808 0.1333407332142048 4 THATV 5 5 22.365 0.0 0.0 2.2533 0.0 0.0 465.30879409004064 0.0 465.30879409004064 0.0 8.386054042683316 0.0 0.0 0 0.3452266673433143 0.0 0.9247425010840048 0.0 THATV 2.2533 - 91 1 1.766 190300.1 0.9700000286102296 3423 4477 7895 HBL1_DMSO_200M_050219_2,7902 HBL1_DMSO_200M_050219_2,7902,TAHPRVLTV False False TAHPRVLTV 42.809907 331.865985095501 1509857.625 7895.0 ENSG00000103168|ENST00000566732|TAF1C;;ENST00000544090.5_1_16:84213937-84215086:-|nuORF;;nc|ENSG00000103168|Q15572-4|TAF1C;;ENST00000564208.5_1_16:84212549-84215086:-|nuORF;;nc|ENSG00000103168|Q15572-2|TAF1C;;nc|ENSG00000103168|Q15572|TAF1C;;ENST00000564774.5_1_16:84214522-84215086:-|nuORF 5.242100238800049 3.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7903 42.824 800.0 155830.0 25 0 14755.0 + 24153 LYQPRASEM 9 125 547.7683434665378 1093.5221339998757 2 547.7684814333916 MULTI CID FTMS 0 0 0 7895 99404.890625 0.0544835206763078 13 -0.4197540283203125 8 Unmodified _LYQPRASEM_ ENSG00000168081|ENST00000301908|PNOC;nc|ENSG00000168081|Q13519-2|PNOC 22.736283301280096 0.2418982879461534 4 {I|L}YQC(Carbamidomethyl (C)) 4 6 49.508 0.0 0.0 4.5274 0.0 0.0 0.0 526.2531832330686 526.2531832330686 32.22811589762955 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.4247425010840047 {I|L}YQC(Carbamidomethyl (C)) 4.5274 - 379 + 1 1.766 96615.5 0.5600000023841858 3424 4477 7895 HBL1_DMSO_200M_050219_2,7903 HBL1_DMSO_200M_050219_2,7903,LYQPRASEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7905 42.828 4.2 11873000.0 25 0 1139000.0 + 24985 MPPPPPQGV 9 81 460.23852327962805 918.462493626056 2 460.2392761111259 MULTI CID FTMS 0 0 0 7904 13279862.0 0.7165890911343518 20 -0.6178665161132812 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 59.79521254764295 0.0261954583213598 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 35.609 0.0 0.0 3.877 3.877 71.357 0.0 0.0 0.0 2.218487496163561 7.900990676322905 2.218487496163561 4.259687322722812 0 1.0994850021680094 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;[NP]NPPPQR;[VG][EP]HPQR;[NP]GGPPPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;[NP]N[YK]QR 3.877;3.4133;2.8701;2.4048;1.0509;0.69673;0.23295 -;-;-;-;-;-;- 164 1 1.766 44316.8 1.0 3425 4478 7904 HBL1_DMSO_200M_050219_2,7905 HBL1_DMSO_200M_050219_2,7905,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7906 42.83 48.0 1354300.0 25 0 203840.0 + 43216 WALNWSLPV 9 65 543.2904189954048 1084.5662850576095 2 543.2906371951103 MULTI CID FTMS 0 0 0 7904 1187525.875 0.8941633020975955 -10 0.3841972351074219 2 Unmodified _WALNWSLPV_ REV__ENST00000473097.5_1_1:1288733-1289815:-|nuORF 15.847184025352805 0.4077185912009129 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[DN]VR 7 -1 41.387 0.0 0.0 3.816 0.0 0.0 0.0 227.10254846744377 227.10254846744377 34.39728522514727 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.4247425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[DN]VR 3.816 - 21 + 1 1.766 55326.9 1.0 3426 4478 7904 HBL1_DMSO_200M_050219_2,7906 HBL1_DMSO_200M_050219_2,7906,WALNWSLPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7907 42.831 62.0 807240.0 25 0 100620.0 + 33367 SGIPEKDLHSV 11 77 394.5436867408933 1180.60923082288 3 394.5434448122978 MULTI CID FTMS 0 0 0 7904 663824.875 1.0 0 0.0 3 Unmodified _SGIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 7.429076235409084 0.8400970696663368 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 5 8 12.932 0.0 0.0 1.0954 0.0 0.0 0.0 566.2603243463499 566.2603243463499 1.9627248839266545 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 1.0954 - 158 + 1 1.766 47489.1 1.0 3427 4478 7904 HBL1_DMSO_200M_050219_2,7907 HBL1_DMSO_200M_050219_2,7907,SGIPEKDLHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7908 42.832 49.0 966370.0 25 0 105140.0 -1 QPCKCKAV 8 80 467.2365671583473 932.4585813834948 2 468.2364074587822 MULTI CID FTMS 0 0 0 -1 0 4 Carbamidomethyl (C) _QPC(Carbamidomethyl (C))KCKAV_ ENSG00000105708|ENST00000344099|ZNF14 9.347437153973935 0.7675937258251505 4 V 1 -1 13.979 0.0 0.0 1.4992 0.0 0.0 815.3791116342744 0.0 815.3791116342744 0.0 4.057875029352969 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4992 + + 49 + 1 1.766 44007.1 1.0 3428 4478 7904 HBL1_DMSO_200M_050219_2,7908 HBL1_DMSO_200M_050219_2,7908,QPCKCKAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7909 42.835 123.0 339380.0 25 0 19836.0 -1 WDTWTCVL 8 80 540.7437351997235 1079.4729174662468 2 540.7443115115166 MULTI CID FTMS 0 0 0 7904 281775.09375 0.5365338312292005 3 -0.1361961364746093 5 Carbamidomethyl (C) _WDTWTC(Carbamidomethyl (C))VL_ ENSG00000214595|ENST00000356458|EML6;nc|ENSG00000214595|Q6ZMW3-2|EML6 24.67388899826682 0.525179942228231 4 DWV{I|L} 4 -1 38.972 0.0 0.0 3.6103 0.0 0.0 548.220506736525 0.0 548.220506736525 0.0 9.66312853471372 0.0 0.0 0 0.805462187404089 0.0 0.3494850021680094 0.0 DWV{I|L} 3.6103 - 53 1 1.766 45880.9 1.0 3429 4478 7904 HBL1_DMSO_200M_050219_2,7909 HBL1_DMSO_200M_050219_2,7909,WDTWTCVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7910 42.842 372.0 332540.0 25 0 43028.0 + 27360 PHVRLRCV 8 130 490.28569284784487 0 490.2858764529228 PEAK CID FTMS 0 0 0 7904 243089.84375 0.9024432602449663 1 -0.0594062805175781 6 Unmodified _PHVRLRCV_ REV__ENST00000532094.5_1_11:420655-431830:-|nuORF 9.347437153973935 0.5488964601725408 4 PS 2 -1 10.969 0.0 0.0 1.1209 0.0 0.0 113.17758735989136 678.2721041315061 791.4496914913975 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PS 1.1209 - 17 + 1 1.766 98878.1 1.0 3430 4478 7904 HBL1_DMSO_200M_050219_2,7910 HBL1_DMSO_200M_050219_2,7910,PHVRLRCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7911 42.855 800.0 143750.0 25 0 11984.0 + 24191 LYYSSSRKVTY 11 88 683.8527866155407 1365.691020297881 2 683.8535644412041 MULTI CID FTMS 0 0 0 7904 127870.0 1.0 0 0.0 7 Unmodified _LYYSSSRKVTY_ ENST00000453465.1_1_10:21915067-21915193:-|nuORF;ENST00000478691.5_1_1:23664326-23665089:-|nuORF;ENST00000490652.1_1_1:23664981-23665089:-|nuORF 57.10758569107544 0.0808838796364293 4 {I|L}YYSS 5 6 71.568 0.0 0.0 5.2404 0.0 0.0 0.0 749.3963106744749 749.3963106744749 22.372118693881543 0.0 0.0 0.0 0 0.75 2.0 0.8494850021680094 0.0 + {I|L}YYSS 5.2404 + + 165 + 1 1.766 86422.4 0.6200000047683716 3431 4478 7904 HBL1_DMSO_200M_050219_2,7911 HBL1_DMSO_200M_050219_2,7911,LYYSSSRKVTY True True LYYSSSRKVTY 42.855479 683.853564441204 924015.8125 7904.0 ENST00000478691.5_1_1:23664326-23665089:-|nuORF;;ENST00000453465.1_1_10:21915067-21915193:-|nuORF;;ENST00000490652.1_1_1:23664981-23665089:-|nuORF 8.28536081314087 2.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7912 42.869 800.0 158950.0 25 0 33415.0 + -1 NDMRQEYEQL 10 119 671.2905189217588 1340.5664849103175 2 671.2910644412041 MULTI CID FTMS 0 0 0 7904 124092.0 1.0 0 0.0 8 Oxidation (M) _NDM(Oxidation (M))RQEYEQL_ ENSG00000171403|ENST00000246662|KRT9;P35527 38.61474834105838 0.1721950110283317 4 [VP]KETV 6 -1 40.423 0.0 0.0 3.0154 0.0 0.0 0.0 684.1674730297112 684.1674730297112 9.787946895250176 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.0044321917401078 0.0 [VP]KETV 3.0154 - 1100 1 1.766 96663.9 0.6200000047683716 3432 4478 7904 HBL1_DMSO_200M_050219_2,7912 HBL1_DMSO_200M_050219_2,7912,NDMRQEYEQL False False NDMRQEYEQL 42.869312 671.291064441204 1157925.75 7904.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 4.714487234751384 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7913 42.883 800.0 60577.0 25 0 15833.0 -1 0 34 1111.1284086196836 3330.363396459251 3 1111.463305652142 MULTI CID FTMS 0 0 0 7904 112304.390625 1.0 0 0.0 9 4 YG 2 -1 10.969 0.0 0.0 0.32937 0.0 0.0 1781.6098086680383 1325.6453687748244 3107.255177442863 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.32937 - 19 + 1 1.766 52708.9 0.4399999976158142 3433 4478 7904 HBL1_DMSO_200M_050219_2,7913 HBL1_DMSO_200M_050219_2,7913, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7915 42.888 7.7 6499300.0 25 0 1623800.0 + 2633 ASVPKVETV 9 72 465.26844440862754 928.5223358840552 2 465.2687255740166 MULTI CID FTMS 0 0 0 7914 7722598.5 0.8141935022019581 2 -0.0767898559570312 1 Unmodified _ASVPKVETV_ ENSG00000100664|ENST00000216554|EIF5 19.256988751693697 0.3154191944385105 4 [KP]VETV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 5 + 33.633 0.0 0.0 3.6222 3.6222 73.703 0.0 0.0 0.0 3.802112417116057 14.168950068207453 3.802112417116057 6.989700043360188 0 0.0 0.0 0.4247425010840047 0.0 [KP]VETV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP]VTEV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.6222;2.8694 -;- 78 1 1.772 47147.4 1.0 3434 4479 7914 HBL1_DMSO_200M_050219_2,7915 HBL1_DMSO_200M_050219_2,7915,ASVPKVETV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7916 42.889 21.0 3209900.0 25 0 573420.0 + 10838 GAAKDLPGV 9 81 414.23447368183207 826.4543944304642 2 414.2346679568291 MULTI CID FTMS 0 0 0 7914 3065804.0 0.9723295719755816 -1 0.0594062805175781 2 Unmodified _GAAKDLPGV_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 43.85829265575387 0.0542763391141878 4 [AG][VS]Q{I|L}PGV 9 3 + 36.913 0.0 0.0 4.4664 4.4664 66.495 0.0 0.0 0.0 7.216036960495565 12.844365682651333 7.216036960495565 0.4845500650402812 0 0.9826446478103829 1.5228787452803376 0.3494850021680094 0.0 [AG][VS]Q{I|L}PGV;[AG][VS]{I|L}QPGV;[KA]DQ{I|L}PGV;[KA]D{I|L}QPGV;[TP]TKQPGV;[QA]{I|L}DKPGV;[QA]{I|L}S[VG]PGV;[KA]D[AG]{I|L}PGV;[KA]D{I|L}[AG]PGV;[AG]A{I|L}[TP][QA]V 4.4664;4.4077;3.5932;3.5346;3.2251;2.5975;2.4994;2.4725;2.4139;2.1104 -;-;-;-;-;-;-;-;-;- 278 1 1.772 57763.5 1.0 3435 4479 7914 HBL1_DMSO_200M_050219_2,7916 HBL1_DMSO_200M_050219_2,7916,GAAKDLPGV True True GAAKDLPGV 42.888893 414.234667956829 24569060.0 7914.0 ENSG00000240682|ENST00000393295|ISY1;;nc|ENSG00000240682|Q9ULR0-2|ISY1;;nc|ENSG00000240682|Q9ULR0-1|ISY1 3.517829338709513 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7917 42.89 20.0 2824500.0 25 0 184860.0 + 4240 DAPMTPKQI 9 84 500.760018192245 999.5054834512902 2 500.7604858279228 MULTI CID FTMS 0 0 0 7914 2764716.5 0.2714614755684657 -12 0.4536094665527344 3 Unmodified _DAPMTPKQI_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1 71.92227651296345 0.0203558744033348 4 {[DA]|[EG]}PMTPKQ{I|L} 9 0 + 84.134 0.0 0.0 8.4176 8.4176 94.79 0.0 0.0 0.0 47.688324713653074 14.436974992327125 14.436974992327125 12.703037561203844 0 0.5796896906561032 2.0 0.9247425010840048 0.9916440611282626 + + {[DA]|[EG]}PMTPKQ{I|L};{[DA]|[EG]}PMTPK[AG]{I|L};{[CT]|[{M(Oxidation (M))|F}G]}P[DV]PKQ{I|L};[KP]TQM{I|L}P{[DA]|[EG]};[KP]QTM{I|L}P{[DA]|[EG]};{[CT]|[{M(Oxidation (M))|F}G]}P[DV]PK[AG]{I|L};[KP]TQMP{I|L}{[DA]|[EG]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}M{I|L}P{[DA]|[EG]};[KP]QTMP{I|L}{[DA]|[EG]};[KP]T[AG]M{I|L}P{[DA]|[EG]} 8.4176;7.1467;3.3366;2.5084;2.2653;2.0657;2.0311;1.8549;1.7879;1.5871 +;-;-;-;-;-;-;-;-;- + 417 + 1 1.772 50545.6 1.0 3436 4479 7914 HBL1_DMSO_200M_050219_2,7917 HBL1_DMSO_200M_050219_2,7917,DAPMTPKQI True True DAPMTPKQI 42.890073 500.760485827923 441465792.0 7914.0 ENSG00000171456|ENST00000375687|ASXL1;;nc|ENSG00000171456|Q8IXJ9-2|ASXL1;;ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant 7.427034536997477 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7918 42.891 54.0 1136100.0 25 0 118500.0 + + -1 EPPPVREI 8 84 468.7613374718353 935.5081220104706 2 468.7599975466728 MULTI CID FTMS 0 0 0 7914 691533.8125 0.502740903533536 -10 0.3926239013671875 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PSPPIERV_ ENSG00000006062|ENST00000344686|MAP3K14;ENST00000592267.1_1_17:43342005-43351146:-|nuORF 26.88365393820708 0.4786498634179528 4 [EP]PPV{[RE]|[WV]}{I|L} 8 -1 + 39.36 0.0 0.0 4.2074 4.2074 66.319 0.0 0.0 0.0 20.274979200736173 0.8895039916081089 0.8895039916081089 0.8895039916081089 0 0.2887254899964357 1.3979400086720375 0.0 0.4247425010840047 [EP]PPV{[RE]|[WV]}{I|L};[EP]PPV[W{I|L}]V;[EP][VG][{I|L}T]{I|L}[HA];[EP]{I|L}Q[KP][QP];[TP][PS][{I|L}T]{I|L}[HA];{[QD]|[EN]|[WG]|[KD]|[RS]}[Y{I|L}][W{I|L}]V 4.2074;4.1123;1.5939;1.4543;0.58761;0.2634 -;-;-;-;-;- 134 + 1 1.772 54641.0 1.0 3437 4479 7914 HBL1_DMSO_200M_050219_2,7918 HBL1_DMSO_200M_050219_2,7918,PSPPIERV False False EPPPVREI 42.891462 468.759997546673 48933824.0 7914.0 ENSG00000006062|ENST00000344686|MAP3K14;;ENST00000592267.1_1_17:43342005-43351146:-|nuORF 4.319033066431682 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7919 42.895 186.0 418830.0 25 0 38884.0 + 21868 LPPEQVTKV 9 110 505.7971851353432 1009.5798173374864 2 505.7978698611259 MULTI CID FTMS 0 0 0 7914 301980.09375 0.8196614144315553 15 -0.4398422241210937 5 Unmodified _LPPEQVTKV_ ENSG00000124920|ENST00000278836|MYRF;nc|ENSG00000124920|Q9Y2G1-2|MYRF 24.99096001346401 0.2132109383330889 4 {I|L}P[EP]N{I|L}TKV 9 2 + 50.727 0.0 0.0 5.0246 5.0246 86.173 0.0 0.0 0.0 21.474211568641444 5.510840447343384 5.510840447343384 32.47302484056647 0 0.9177353201839438 2.0 0.0 0.0 {I|L}P[EP]N{I|L}TKV;{I|L}V[YE]{M(Oxidation (M))|F}{I|L}KV 5.0246;1.8081 -;- 267 + 1 1.772 63264.0 1.0 3438 4479 7914 HBL1_DMSO_200M_050219_2,7919 HBL1_DMSO_200M_050219_2,7919,LPPEQVTKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7920 42.898 152.0 392980.0 25 0 34444.0 + 28016 PMPPRTNE 8 73 471.2300881821903 940.4456234311806 2 471.2293884158134 MULTI CID FTMS 0 0 0 7914 294102.75 0.3887346325233917 18 -0.4986953735351562 6 Unmodified _PMPPRTNE_ REV__ENSG00000101203|ENST00000358894|COL20A1;REV__ENST00000471582.5_1_20:61956720-61961007:+|nuORF;REV__ENST00000479501.5_1_20:61950534-61961007:+|nuORF;REV__nc|ENSG00000101203|Q9P218-2|COL20A1;REV__nc|ENSG00000101203|Q9P218-3|COL20A1 15.847184025352805 0.6768015514314958 4 MPPP 4 -1 56.983 0.0 0.0 6.0591 0.0 0.0 0.0 515.2247784869517 515.2247784869517 46.38659013896616 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 MPPP 6.0591 - 59 + 1 1.772 51166.4 1.0 3439 4479 7914 HBL1_DMSO_200M_050219_2,7920 HBL1_DMSO_200M_050219_2,7920,PMPPRTNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7921 42.9 102.0 641100.0 25 0 63537.0 + 6535 EALGNVRTV 9 102 479.7692879751714 957.5240230171428 2 479.7689391970634 MULTI CID FTMS 0 0 0 7914 276450.09375 0.1346519480293338 -6 0.2833938598632812 7 Unmodified _EALGNVRTV_ ENSG00000197150|ENST00000358849|ABCB8;ENST00000466514.5_1_7:150731570-150742433:+|nuORF;ENST00000470645.5_1_7:150732911-150733055:+|nuORF;nc|ENSG00000197150|Q9NUT2-3|ABCB8;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-5|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8 36.506200033944 0.094635877243972 4 {[CP]|[EA]}{I|L}GNVRTV 9 0 + 41.424 0.0 0.0 4.3262 4.3262 71.496 0.0 0.0 0.0 5.642492736872597 3.2735893438633 3.2735893438633 3.2735893438633 0 0.3494850021680094 0.0 0.0 0.3807196863200844 + + {[CP]|[EA]}{I|L}GNVRTV;{[CP]|[EA]}{I|L}GNVRS{I|L};{[CP]|[EA]}{I|L}GGGVRTV;{[CP]|[EA]}{I|L}GGGVRS{I|L};{[CP]|[EA]}{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[PG];{[CP]|[EA]}{I|L}[RN]RTV;{[CP]|[EA]}{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PG]V;{[CP]|[EA]}{I|L}[RN]RS{I|L};{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}VRTV;{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]}VRS{I|L} 4.3262;3.9843;3.3645;3.0226;2.6803;2.3201;2.2354;1.9783;1.6082;1.2663 +;-;-;-;-;-;-;-;-;- + 148 + 1 1.772 53329.3 1.0 3440 4479 7914 HBL1_DMSO_200M_050219_2,7921 HBL1_DMSO_200M_050219_2,7921,EALGNVRTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7922 42.914 800.0 235200.0 25 0 15655.0 + 8978 FASHVSPEV 9 176 486.7427199742478 971.4708870152956 2 486.7433959841728 MULTI CID FTMS 0 0 0 7914 127171.9765625 0.0357481743893203 -12 0.4536094665527344 8 Unmodified _FASHVSPEV_ ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3 85.35673624503755 0.0162188719545379 4 [HS]VA{M(Oxidation (M))|F}SPEV 9 4 + 60.457 0.0 0.0 6.2233 6.2233 76.437 0.0 0.0 0.0 4.793197719702015 31.99201723133486 4.793197719702015 1.9015085044215847 0 1.0731074559755158 0.5376020021010439 1.4049471895720984 0.0 [HS]VA{M(Oxidation (M))|F}SPEV;[HS]A{M(Oxidation (M))|F}VSPEV;[HV]SA{M(Oxidation (M))|F}SPEV;{[SA]|[TG]}{M(Oxidation (M))|F}HVSPEV;[HS]VSA{M(Oxidation (M))|F}PEV;[HS]AV{M(Oxidation (M))|F}SPEV;[VS]HA{M(Oxidation (M))|F}SPEV;{[SA]|[TG]}H{M(Oxidation (M))|F}VSPEV;[HS]VAS{M(Oxidation (M))|F}PEV;[HV]SSA{M(Oxidation (M))|F}PEV 6.2233;6.0275;5.601;5.4946;5.4943;5.4847;5.3242;5.2444;4.9837;4.872 -;-;-;-;-;-;-;-;-;- 4122 1 1.772 144526.8 0.6100000143051147 3441 4479 7914 HBL1_DMSO_200M_050219_2,7922 HBL1_DMSO_200M_050219_2,7922,FASHVSPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7924 42.919 58.0 731920.0 25 0 119390.0 43734 YDLNKTQMD 9 63 564.2552530509421 1126.495953168684 2 564.2556030154228 MULTI CID FTMS 0 0 0 7923 940696.75 0.8133211958681463 1 -0.0459327697753906 1 Unmodified _YDLNKTQMD_ ENSG00000135677|ENST00000258145|GNS;ENST00000540883.1_1_12:65116746-65122837:-|nuORF;nc|ENSG00000135677|P15586-2|GNS 24.99096001346401 0.2132109383330889 4 {[YD]|[{M(Oxidation (M))|F}M]}N{I|L}Q[KS]EM 9 5 + 75.423 0.0 0.0 6.6954 6.6954 76.462 0.0 0.0 0.0 49.11114057108961 16.21523434085148 16.21523434085148 0.9936247538460918 0 0.9247425010840048 2.0 0.3807196863200844 0.3494850021680094 {[YD]|[{M(Oxidation (M))|F}M]}N{I|L}Q[KS]EM;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}V{[SA]|[TG]}QSM;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}[KT]NEM;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}[KT]DQM;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}V{[SA]|[TG]}SQM;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}[AG][KS]EM;{[YD]|[{M(Oxidation (M))|F}M]}GG{I|L}Q[KS]EM;{[YD]|[{M(Oxidation (M))|F}M]}GG{I|L}V{[SA]|[TG]}QSM;{[YD]|[{M(Oxidation (M))|F}M]}[KS]Q{I|L}NEM;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}V{[SA]|[TG]}[AG]SM 6.6954;6.6072;6.2515;6.0941;5.9629;5.878;5.878;5.7937;5.6474;5.4834 -;-;-;-;-;-;-;-;-;- 381 + 1 1.772 37202.3 1.0 3442 4480 7923 HBL1_DMSO_200M_050219_2,7924 HBL1_DMSO_200M_050219_2,7924,YDLNKTQMD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7925 42.932 800.0 143170.0 25 0 8852.0 + 17358 KLYGNDFSQT 10 143 586.7825329216342 1171.5505129100684 2 586.7818481326103 MULTI CID FTMS 0 0 0 7923 221598.890625 0.9469126935636069 -2 0.0902633666992187 2 Unmodified _KLYGNDFSQT_ chr19:42092134-42093829|48|27.9|0.5|5.79|-|ENST00000529067|POU2F2,POU2F2;chr19:42099821-42116709|41|13.12|0.46|4.84|-|ENST00000526831|POU2F2,POU2F2;chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2;ENSG00000028277|ENST00000692977|POU2F2;ENSG00000137709|ENST00000543440|POU2F3;ENSG00000143190|ENST00000367866|POU2F1;ENST00000533620.5_1_11:120169092-120189098:+|nuORF;ENST00000559648.1_1_1:167358914-167365774:+|nuORF;nc|ENSG00000028277|P09086-2|POU2F2;nc|ENSG00000028277|P09086-3|POU2F2;nc|ENSG00000028277|P09086-4|POU2F2;nc|ENSG00000028277|P09086-5|POU2F2;nc|ENSG00000028277|P09086|POU2F2;nc|ENSG00000137709|Q9UKI9-2|POU2F3;nc|ENSG00000137709|Q9UKI9-3|POU2F3;nc|ENSG00000143190|P14859-2|POU2F1;nc|ENSG00000143190|P14859-3|POU2F1;nc|ENSG00000143190|P14859-4|POU2F1;nc|ENSG00000143190|P14859-5|POU2F1;nc|ENSG00000143190|P14859|POU2F1 110.5527297667825 0.0023234913804031 4 {[ET]|[MV]}S{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}SQT 10 6 + 62.523 0.0 0.0 5.3368 5.3368 71.622 0.0 0.0 0.0 1.270388721149068 15.843312243675308 1.270388721149068 1.270388721149068 0 0.9049471895720984 0.0 2.024227503252014 0.0 {[ET]|[MV]}S{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}SQT;[K{I|L}]Y[NG]D{M(Oxidation (M))|F}SQT;[QT]{M(Oxidation (M))|F}GY[K{I|L}]SQT;[YG]ND[K{I|L}]{M(Oxidation (M))|F}SQT;{[ET]|[MV]}S{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}S[AG]T;[K{I|L}]Y[NG]D{M(Oxidation (M))|F}S[AG]T;[AG]S[KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}SQT;{[ET]|[MV]}S{I|L}[VG][HN]SQT;[AG]T{M(Oxidation (M))|F}GY[K{I|L}]SQT;{[QS]|[NT]}[KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}SQT 5.3368;5.2283;4.7785;4.5876;4.5545;4.4461;4.394;4.2976;4.2711;4.0381 -;+;-;-;-;-;-;-;-;- + 1174 1 1.772 88804.5 0.6399999856948853 3443 4480 7923 HBL1_DMSO_200M_050219_2,7925 HBL1_DMSO_200M_050219_2,7925,KLYGNDFSQT True True KLYGNDFSQT 42.932412 586.78184813261 1652181.625 7923.0 nc|ENSG00000028277|P09086|POU2F2;;nc|ENSG00000143190|P14859-5|POU2F1;;nc|ENSG00000028277|P09086-3|POU2F2;;nc|ENSG00000137709|Q9UKI9-2|POU2F3;;nc|ENSG00000143190|P14859-3|POU2F1;;nc|ENSG00000137709|Q9UKI9-3|POU2F3;;nc|ENSG00000143190|P14859|POU2F1;;chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2;;nc|ENSG00000028277|P09086-5|POU2F2;;chr19:42092134-42093829|48|27.9|0.5|5.79|-|ENST00000529067|POU2F2,POU2F2;;ENSG00000137709|ENST00000543440|POU2F3;;ENST00000533620.5_1_11:120169092-120189098:+|nuORF;;nc|ENSG00000143190|P14859-4|POU2F1;;chr19:42099821-42116709|41|13.12|0.46|4.84|-|ENST00000526831|POU2F2,POU2F2;;nc|ENSG00000143190|P14859-2|POU2F1;;ENST00000559648.1_1_1:167358914-167365774:+|nuORF;;nc|ENSG00000028277|P09086-4|POU2F2;;ENSG00000143190|ENST00000367866|POU2F1;;ENSG00000028277|ENST00000692977|POU2F2;;nc|ENSG00000028277|P09086-2|POU2F2 7.777953783671061 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7926 42.946 791.0 255400.0 25 0 29759.0 + 33369 SGIPEKDLHSV 11 151 591.3117058555949 1180.6088587779898 2 591.3124267458916 MULTI CID FTMS 0 0 0 7923 285419.875 0.7441190272898512 3 -0.0788803100585937 3 Unmodified _SGIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 79.86024073602366 0.007760565640174 4 SH{I|L}HQSVAW 9 9 73.032 0.0 0.0 6.1859 0.0 0.0 117.07938582588046 0.0 117.07938582588046 0.0 27.289685464404307 0.0 0.0 0 0.7742275032520141 0.0 1.6976212463643423 0.0 SH{I|L}HQSVAW 6.1859 - 9882 1 1.772 151109.0 1.0 3444 4480 7923 HBL1_DMSO_200M_050219_2,7926 HBL1_DMSO_200M_050219_2,7926,SGIPEKDLHSV True True SGIPEKDLHSV 42.946098 591.312426745892 28315990.5 7923.0 ENST00000606952.5_1_1:156203463-156206310:+|nuORF;;ENSG00000160783|ENST00000368277|PMF1;;nc|ENSG00000160783|Q6P1K2-2|PMF1;;nc|ENSG00000160783|Q6P1K2-4|PMF1 7.8326975504557295 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7927 42.96 800.0 88078.0 25 0 6707.5 + 45163 YQGGMGPV 8 75 808.3640426779804 807.3567662113803 1 808.3619872927666 MULTI CID FTMS 0 0 0 7923 87027.78125 0.5881398612209151 -11 0.4234809875488281 4 Unmodified _YQGGMGPV_ REV__ENST00000604292.1_1_6:101337865-101338153:+|nuORF 9.347437153973935 0.7675937258251505 4 AE[HA]YQ 6 -1 28.416 0.0 0.0 3.5197 0.0 0.0 90.05074922094907 0.0 90.05074922094907 0.0 24.436974992327123 0.0 0.0 0 0.0 0.0 0.0 0.6989700043360187 AE[HA]YQ 3.5197 - 121 + 1 1.772 54398.1 0.5099999904632568 3445 4480 7923 HBL1_DMSO_200M_050219_2,7927 HBL1_DMSO_200M_050219_2,7927,YQGGMGPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7929 42.966 211.0 302640.0 25 0 36880.0 + 228 AAVDAVARV 9 95 436.2530000142567 870.4914470953133 2 436.2533752322197 MULTI CID FTMS 0 0 0 7928 285777.40625 0.7796201233870939 2 -0.0329475402832031 1 Unmodified _AAVDAVARV_ ENSG00000184967|ENST00000330579|NOC4L;ENST00000535343.5_1_12:132632219-132636084:+|nuORF 41.8396318013385 0.0653578398400075 4 AAVDAV{[QV]|[N{I|L}]|[RA]|[KV]}V 9 0 + 62.33 0.0 0.0 7.1603 7.1603 90.847 0.0 0.0 0.0 42.28591448099354 4.436974992327123 4.436974992327123 9.489700043360187 0 1.424742501084005 1.5228787452803376 0.0 0.0 + + AAVDAV{[QV]|[N{I|L}]|[RA]|[KV]}V;AAVDVA{[QV]|[N{I|L}]|[RA]|[KV]}V;AAVWV{[QV]|[N{I|L}]|[RA]|[KV]}V;AAVVDA{[QV]|[N{I|L}]|[RA]|[KV]}V 7.1603;6.0701;5.9281;5.2364 +;-;-;- + 187 + 1 1.772 54244.3 1.0 3446 4481 7928 HBL1_DMSO_200M_050219_2,7929 HBL1_DMSO_200M_050219_2,7929,AAVDAVARV True True AAVDAVARV 42.966253 436.25337523222 2289743.75 7928.0 ENST00000535343.5_1_12:132632219-132636084:+|nuORF;;ENSG00000184967|ENST00000330579|NOC4L 4.5694154898325605 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7930 42.97 220.0 323180.0 25 0 19430.0 -1 MLRDERLL 8 107 531.2902580369018 1060.5659631406036 2 532.2929565310478 MULTI CID FTMS 0 0 0 7928 122158.4453125 0.5335583979340509 3 -0.0580177307128906 2 Oxidation (M) _M(Oxidation (M))LRDERLL_ ENSG00000142794|ENST00000318249|NBPF3;nc|ENSG00000142794|Q9H094-2|NBPF3;nc|ENSG00000142794|Q9H094-3|NBPF3;nc|ENSG00000142794|Q9H094-5|NBPF3 9.347437153973935 0.7675937258251505 4 VVM[KA] 5 -1 17.447 0.0 0.0 1.6451 0.0 0.0 514.2452870099625 0.0 514.2452870099625 0.0 4.003924710485904 0.0 0.0 0 0.0 0.0 0.0 0.0 VVM[KA] 1.6451 - 167 1 1.772 59594.3 1.0 3447 4481 7928 HBL1_DMSO_200M_050219_2,7930 HBL1_DMSO_200M_050219_2,7930,MLRDERLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7932 42.975 116.0 530910.0 25 0 49627.0 11126 GEHGRRGV 8 95 434.2319441990056 866.4493354648113 2 434.2319518923759 MULTI CID FTMS 0 0 0 7931 417826.25 0.4723629764968114 4 -0.133697509765625 1 Unmodified _GEHGRRGV_ ENST00000359827.7_1_7:132261243-132261777:-|nuORF 23.1484247019978 0.5573009939494978 4 [VS]P[{M(Oxidation (M))|F}V]YGV 8 6 + 30.623 0.0 0.0 3.5343 3.5343 79.655 0.0 0.0 0.0 16.64320017660792 5.344406447039063 5.344406447039063 18.561062652429914 0 0.4247425010840047 0.0 0.0 0.0 [VS]P[{M(Oxidation (M))|F}V]YGV;[VS]PE{[TV]|[{I|L}S]}HV 3.5343;1.3921 -;- 107 + 1 1.772 51271.1 1.0 3448 4482 7931 HBL1_DMSO_200M_050219_2,7932 HBL1_DMSO_200M_050219_2,7932,GEHGRRGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7933 42.989 797.0 323940.0 25 0 32379.0 + 17148 KLIDRTESL 9 154 537.8113247394633 1073.6080965457263 2 537.8119384646416 MULTI CID FTMS 0 0 0 7931 307163.53125 0.7075015702290051 -2 0.0564117431640625 2 Unmodified _KLIDRTESL_ ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1 57.2037768669896 0.0276302343558183 4 K{I|L}{I|L}D{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}{I|L} 8 3 66.055 0.0 0.0 6.1526 0.0 0.0 0.0 80.05127130679921 80.05127130679921 22.76547920854292 0.0 0.0 0.0 0 1.610924374808178 0.7958800173440752 1.079689690656103 0.0 K{I|L}{I|L}D{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}{I|L} 6.1526 - 525 + 1 1.772 197973.1 1.0 3449 4482 7931 HBL1_DMSO_200M_050219_2,7933 HBL1_DMSO_200M_050219_2,7933,KLIDRTESL True True KLIDRTESL 42.988928 537.811938464642 2605398.25 7931.0 ENSG00000130592|ENST00000311604|LSP1;;nc|ENSG00000130592|P33241-3|LSP1;;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;;nc|ENSG00000130592|P33241-2|LSP1 4.032816410064697 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7934 42.993 206.0 320860.0 25 0 20813.0 + 31206 RLQESVMEA 9 95 531.7665162495305 1061.5184795658608 2 531.7664062380791 MULTI CID FTMS 0 0 0 7931 194342.140625 0.7457351754827488 -1 0.0104789733886718 3 Unmodified _RLQESVMEA_ ENSG00000164754|ENST00000297338|RAD21 29.84058131909904 0.1515068451768857 4 SVMEA 5 4 44.508 0.0 0.0 4.1929 0.0 0.0 526.2852650373062 0.0 526.2852650373062 0.0 32.034021960761265 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 + SVMEA 4.1929 + + 147 1 1.772 58275.6 1.0 3450 4482 7931 HBL1_DMSO_200M_050219_2,7934 HBL1_DMSO_200M_050219_2,7934,RLQESVMEA False True RLQESVMEA 42.992864 531.766406238079 1692723.0 7931.0 ENSG00000164754|ENST00000297338|RAD21 5.218049685160319 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7936 42.997 15.0 4168400.0 25 0 958070.0 + 1320 AIVVGGKG 8 58 350.7213170772315 699.428081221263 2 350.7211486697197 MULTI CID FTMS 0 0 0 7935 4035610.75 0.8333574079010976 3 -0.1112289428710937 1 Unmodified _AIVVGGKG_ REV__ENSG00000188011|ENST00000343216|RTP5;REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF 9.347437153973935 0.7675937258251505 4 [{I|L}A]{I|L}EVR 6 -1 + 53.047 0.0 0.0 7.5843 7.5843 82.958 0.0 0.0 0.0 32.8398734054117 14.798121020293657 14.798121020293657 3.0102999566398125 0 0.4247425010840047 2.0 0.0 0.3807196863200844 [{I|L}A]{I|L}EVR;[{I|L}A]V{I|L}ER;[{I|L}A]{I|L}VER 7.5843;7.1539;6.1792 -;-;- 46 + 1 1.772 54599.5 1.0 3451 4483 7935 HBL1_DMSO_200M_050219_2,7936 HBL1_DMSO_200M_050219_2,7936,AIVVGGKG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7937 43.002 263.0 236130.0 25 0 54654.0 + 39663 VEDRKRNK 8 71 522.8007703496495 1043.586987766099 2 522.8020507693291 MULTI CID FTMS 0 0 0 7935 132991.25 0.2115546672149421 8 -0.2190589904785156 2 Unmodified _VEDRKRNK_ REV__ENSG00000170448|ENST00000507489|NFXL1 7.910154910731844 0.7763180056447161 4 {NN|[MP]|[D{I|L}]|[EV]}D 3 -1 23.222 0.0 0.0 2.2252 0.0 0.0 0.0 697.4242734929145 697.4242734929145 2.2526846188150884 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}D 2.2252 + + 20 1 1.772 55630.7 1.0 3452 4483 7935 HBL1_DMSO_200M_050219_2,7937 HBL1_DMSO_200M_050219_2,7937,VEDRKRNK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7938 43.004 80.0 1045900.0 25 0 131700.0 + 42681 VTVTPMKFV 9 84 341.1977598371467 1020.5714501116402 3 341.1974975466728 MULTI CID FTMS 0 0 0 7935 516238.8125 0.5662630184186865 4 -0.1326904296875 3 Unmodified _VTVTPMKFV_ REV__ENSG00000105227|ENST00000324001|PRX;REV__ENST00000291825.11_2_19:40899875-40904000:-|nuORF;REV__nc|ENSG00000105227|Q9BXM0-3|PRX 10.150570793230772 0.5619192000662246 4 {[TV]|[{I|L}S]}V 3 -1 33.345 0.0 0.0 3.2673 0.0 0.0 0.0 718.3634403809077 718.3634403809077 20.87057969717064 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {[TV]|[{I|L}S]}V 3.2673 + + 25 + 1 1.772 70439.7 1.0 3453 4483 7935 HBL1_DMSO_200M_050219_2,7938 HBL1_DMSO_200M_050219_2,7938,VTVTPMKFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7939 43.018 800.0 341870.0 25 0 29819.0 + 11541 GIPPHVVKV 9 236 315.8674901686352 0 315.8673889040947 PEAK CID FTMS 0 0 0 7935 156517.640625 0.9192856149759856 -3 0.0788803100585937 4 Unmodified _GIPPHVVKV_ ENSG00000145907|ENST00000356245|G3BP1 19.361941925380144 0.2068558026293938 4 G 1 8 6.9897 0.0 0.0 1.11 0.0 0.0 487.60950929059214 82.06691156558827 569.6764208561804 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 1.11 + + 45 + 1 1.772 216900.7 1.0 3454 4483 7935 HBL1_DMSO_200M_050219_2,7939 HBL1_DMSO_200M_050219_2,7939,GIPPHVVKV False True GIPPHVVKV 43.017964 315.867388904095 7069599.875 7935.0 ENSG00000145907|ENST00000356245|G3BP1 5.679945151011149 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7941 43.023 102.0 459390.0 25 0 35052.0 + 2117 APTPAQAQI 9 82 448.7451664676896 895.4757800021791 2 448.7454406619072 MULTI CID FTMS 0 0 0 7940 464291.5625 0.7709028489927376 2 -0.0861587524414062 1 Unmodified _APTPAQAQI_ ENSG00000165417|ENST00000553612|GTF2A1;ENST00000298173.7_1_14:81646569-81676264:-|nuORF;nc|ENSG00000165417|P52655-2|GTF2A1 42.09456458481378 0.0639583784996157 4 AGAAS 5 6 35.037 0.0 0.0 3.9127 0.0 0.0 330.1886228750291 205.10129724674064 535.2899201217698 0.0 0.0 0.0 0.0 0 0.0 0.0 1.610924374808178 0.0 AGAAS 3.9127 - 145 + 1 1.772 42870.0 1.0 3455 4484 7940 HBL1_DMSO_200M_050219_2,7941 HBL1_DMSO_200M_050219_2,7941,APTPAQAQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7942 43.036 800.0 113540.0 25 0 9831.9 -1 LTFHTDMAV 9 159 525.7480054555268 1049.4814579778536 2 525.7485229372978 MULTI CID FTMS 0 0 0 7940 98884.4140625 0.3494842009303082 6 -0.1711387634277343 2 Oxidation (M) _LTFHTDM(Oxidation (M))AV_ ENSG00000118257|ENST00000357785|NRP2;nc|ENSG00000118257|O60462-2|NRP2;nc|ENSG00000118257|O60462-4|NRP2;nc|ENSG00000118257|O60462-5|NRP2;nc|ENSG00000118257|O60462-6|NRP2;nc|ENSG00000118257|O60462|NRP2 16.942295170755138 0.3780752226737986 4 [QA][YC(Carbamidomethyl (C))][DP]VVV 9 -1 [QA][YC(Carbamidomethyl (C))][DP]V + + 30.217 -14.877 -1.7852 2.8792 2.8792 45.666 0.0 0.0 0.0 0.0 0.4464496667179638 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 [QA][YC(Carbamidomethyl (C))][DP]VVV 2.8792 - 647 + 1 1.772 83162.4 0.6600000262260437 3456 4484 7940 HBL1_DMSO_200M_050219_2,7942 HBL1_DMSO_200M_050219_2,7942,LTFHTDMAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7943 43.039 105.0 1122700.0 25 0 123480.0 + 16349 IYMGHVKGY 9 104 356.51619997744683 1066.5267705325405 3 356.5161315798759 MULTI CID FTMS 0 0 0 7940 564609.125 1.0 0 0.0 3 Unmodified _IYMGHVKGY_ ENSG00000126226|ENST00000337344|PCID2;nc|ENSG00000126226|Q5JVF3-2|PCID2;nc|ENSG00000126226|Q5JVF3-3|PCID2;nc|ENSG00000126226|Q5JVF3-4|PCID2 32.30548876998284 0.1201446275138228 4 {I|L}YMGHVKGY 9 0 + 72.349 0.0 0.0 6.7836 6.7836 94.101 0.0 0.0 0.0 48.86104379539295 12.641865279118782 12.641865279118782 61.724347222421535 0 0.0 1.2218487496163564 0.0 0.4247425010840047 + + {I|L}YMGHVKGY;[HV]GK[HT]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[HG]|PP}VK[HT]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[HV]GMY[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[RH][VS]YVSGY;{[HG]|PP}VMY[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[RH][VS]VYSGY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[HG]|PP}V[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[HG]|PP}MVY[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[HG]|PP}MYV[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 6.7836;0.99618;0.99209;0.71393;0.71165;0.70984;0.54654;0.33166;0.31044;0.14533 +;-;-;-;-;-;-;-;-;- + 246 + 1 1.772 98308.0 1.0 3457 4484 7940 HBL1_DMSO_200M_050219_2,7943 HBL1_DMSO_200M_050219_2,7943,IYMGHVKGY True True IYMGHVKGY 43.03858 356.516131579876 3654424.0 7940.0 nc|ENSG00000126226|Q5JVF3-2|PCID2;;nc|ENSG00000126226|Q5JVF3-4|PCID2;;nc|ENSG00000126226|Q5JVF3-3|PCID2;;ENSG00000126226|ENST00000337344|PCID2 7.174881299336751 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7944 43.052 800.0 168310.0 25 0 18603.0 + 18533 KYQSPVRVY 9 130 570.3127413557964 1138.6109297783928 2 570.3130370974541 MULTI CID FTMS 0 0 0 7940 153044.671875 0.9668511853943847 -4 0.1039505004882812 4 Unmodified _KYQSPVRVY_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000588696.5_1_17:75139678-75139750:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1 67.83816525789305 0.0219346420158844 4 KYQSVP[RV]Y 9 2 + 88.15 0.0 0.0 7.7419 7.7419 91.36 0.0 0.0 0.0 64.4387407508647 15.510752252503366 15.510752252503366 9.208187539523747 0 2.504432191740108 0.9208187539523752 0.7059771852360797 1.079689690656103 KYQSVP[RV]Y;KY[AG]SVP[RV]Y;KYQSVP[{I|L}T]{[CT]|[{M(Oxidation (M))|F}G]};KYQS[YQ][{I|L}P]{I|L};KY[AG]SVP[{I|L}T]{[CT]|[{M(Oxidation (M))|F}G]};[YK]QSVP[RV]Y;KY{[WT]|[RM]}[R{I|L}]SW;KY{[WT]|[RM]}[R{I|L}]C(Carbamidomethyl (C)){I|L};KY[WK]P[{I|L}T]{[CT]|[{M(Oxidation (M))|F}G]};{[HG]|PP}PQSVP[RV]Y 7.7419;6.9332;5.4623;5.2198;4.2844;3.979;3.7238;3.1099;2.931;2.8232 -;-;-;-;-;-;-;-;-;- 461 + 1 1.772 104215.8 0.7099999785423279 3458 4484 7940 HBL1_DMSO_200M_050219_2,7944 HBL1_DMSO_200M_050219_2,7944,KYQSPVRVY True True KYQSPVRVY 43.052416 570.313037097454 1490323.25 7940.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENST00000588696.5_1_17:75139678-75139750:+|nuORF;;ENSG00000129657|ENST00000436233|SEC14L1 5.89380407333374 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7945 43.066 800.0 235260.0 25 0 51581.0 + 45950 YYYDTHTNTY 10 123 670.7744652680572 1339.5343776029142 2 670.7762939333916 MULTI CID FTMS 0 0 0 7940 108062.8671875 0.0533517852020609 -9 0.3413581848144531 5 Unmodified _YYYDTHTNTY_ ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2 99.7552728972412 0.0086345419122624 4 [HT]DYTNTYYY 10 7 + 86.826 0.0 0.0 6.4818 6.4818 77.83 0.0 0.0 0.0 2.100482788152874 16.53212513775344 2.100482788152874 2.100482788152874 0 0.0 0.9208187539523752 2.376795939188455 0.3494850021680094 [HT]DYTNTYYY;YYYHNWMTY;YYYHYHMTY;[HT]DYTNYTYY;YYYHNT[WM]Y;[HT]DYTTNYYY;YYYDTQA[NS]C{I|L};YYY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[NG]TY;YYQYNTYYY;[HT]DTYNTYYY 6.4818;6.325;6.2791;6.1647;5.9879;5.8647;5.8255;5.7765;5.7062;5.6991 -;-;-;-;-;-;-;-;-;- 21440 1 1.772 138464.4 0.6000000238418579 3459 4484 7940 HBL1_DMSO_200M_050219_2,7945 HBL1_DMSO_200M_050219_2,7945,YYYDTHTNTY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7946 43.074 464.0 411140.0 25 0 150760.0 + 7947 ELRTKERV 8 140 515.8050054345462 1029.5954579358922 2 515.8065673708916 MULTI CID FTMS 0 0 0 7940 100053.7265625 0.5608698291264116 -3 0.0580177307128906 6 Unmodified _ELRTKERV_ REV__ENSG00000065491|ENST00000373491|TBC1D22B 28.486842064014134 0.4448922141344407 4 KY{I|L}K 4 -1 31.714 0.0 0.0 3.0803 0.0 0.0 0.0 494.2223299615844 494.2223299615844 4.928410629103599 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 KY{I|L}K 3.0803 - 942 + 1 1.772 145490.3 1.0 3460 4484 7940 HBL1_DMSO_200M_050219_2,7946 HBL1_DMSO_200M_050219_2,7946,ELRTKERV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7947 43.088 800.0 159910.0 25 0 20304.0 -1 0 64 953.9409569199004 1905.8673609066009 2 954.4423705935478 MULTI CID FTMS 0 0 0 7940 94939.9453125 0.3153725358911276 -7 0.2486152648925781 7 4 {M(Oxidation (M))|F} 1 -1 11.42 0.0 0.0 0.5992 0.0 0.0 1740.8240087110914 0.0 1740.8240087110914 0.0 4.430283238465815 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.5992 - 8 + 1 1.772 93160.8 0.4900000095367431 3461 4484 7940 HBL1_DMSO_200M_050219_2,7947 HBL1_DMSO_200M_050219_2,7947, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7949 43.093 4.2 12224000.0 25 0 1314700.0 + 24986 MPPPPPQGV 9 79 460.23852327962805 918.462493626056 2 460.2392455935478 MULTI CID FTMS 0 0 0 7948 13953728.0 0.752951293127591 27 -1.2684555053710938 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 78.44472497914707 0.017893573946697 4 [VG]EHPPQR 8 6 + 47.853 0.0 0.0 5.2102 5.2102 76.123 0.0 0.0 0.0 3.99166239860314 9.061734207603749 3.99166239860314 3.99166239860314 0 1.1989700043360187 1.6989700043360187 0.0 0.0 [VG]EHPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQR;[VG]EPHPQR;{[HG]|PP}NNPPQR;{[HG]|PP}NGGPPQR;{[HG]|PP}GGNPPQR;{[HG]|PP}GGGGPPQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR 5.2102;4.7756;4.1401;3.8493;2.8409;2.8409;1.8383;1.4869;1.4869 -;-;-;-;-;-;-;-;- 200 1 1.774 44000.7 1.0 3462 4485 7948 HBL1_DMSO_200M_050219_2,7949 HBL1_DMSO_200M_050219_2,7949,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7950 43.094 20.0 3710400.0 25 0 410130.0 + 43226 WAPIRDGASI 10 69 362.5294940101128 1084.5666526305386 3 362.5293762087822 MULTI CID FTMS 0 0 0 7948 2897713.25 0.9571419417139324 -2 0.0954055786132812 2 Unmodified _WAPIRDGASI_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 17.11289562659939 0.5604042439455784 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 5 -1 43.729 0.0 0.0 4.0319 0.0 0.0 0.0 485.24640833072505 485.24640833072505 32.30873863874224 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.805462187404089 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 4.0319 - 82 + 1 1.774 71522.5 1.0 3463 4485 7948 HBL1_DMSO_200M_050219_2,7950 HBL1_DMSO_200M_050219_2,7950,WAPIRDGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7951 43.095 42.0 1586600.0 25 0 224440.0 + 43217 WALNWSLPV 9 60 543.2904189954048 1084.5662850576095 2 543.2906371951103 MULTI CID FTMS 0 0 0 7948 1305052.25 0.9826563393996756 -3 0.1178741455078125 3 Unmodified _WALNWSLPV_ REV__ENST00000473097.5_1_1:1288733-1289815:-|nuORF 15.847184025352805 0.4077185912009129 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE 4 -1 37.435 0.0 0.0 3.4516 0.0 0.0 0.0 598.3325641780683 598.3325641780683 34.67080279379527 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE 3.4516 - 25 + 1 1.774 58060.6 1.0 3464 4485 7948 HBL1_DMSO_200M_050219_2,7951 HBL1_DMSO_200M_050219_2,7951,WALNWSLPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7952 43.097 84.0 589980.0 25 0 40739.0 + 38677 TTLERTEGL 9 77 510.271555187664 1018.528557442128 2 510.2726928591728 MULTI CID FTMS 0 0 0 7948 489494.75 0.7711249595209206 -2 0.0954055786132812 4 Unmodified _TTLERTEGL_ ENSG00000134001|ENST00000256383|EIF2S1 49.55428908609986 0.0413471690215031 4 TT{I|L}{[HG]|PP}G[YT]G{I|L} 10 4 + 64.268 0.0 0.0 6.3098 6.3098 85.19 0.0 0.0 0.0 37.30356444677673 2.140012553530965 2.140012553530965 8.438718088259805 0 1.4436726795685342 2.0 0.4247425010840047 0.0 TT{I|L}{[HG]|PP}G[YT]G{I|L};TT{I|L}{[HG]|PP}G[YT]AV;TT{I|L}[QP][Y{I|L}][PS];TT{I|L}[QP][YT]PV;[PS]{I|L}[DP]{[HG]|PP}{I|L}[PS];[{I|L}T][YT][QP]{I|L}[PS];{[DS]|[MA]|[CV]|TT}{I|L}Y[HA][WK];[{I|L}T]TY[HA][WK] 6.3098;5.4813;5.1614;4.7556;2.9826;1.8148;0.84179;0.26267 -;-;-;-;-;-;-;- 129 + 1 1.774 42931.1 1.0 3465 4485 7948 HBL1_DMSO_200M_050219_2,7952 HBL1_DMSO_200M_050219_2,7952,TTLERTEGL True True TTLERTEGL 43.097119 510.272692859173 3772606.0 7948.0 ENSG00000134001|ENST00000256383|EIF2S1 5.916971206665039 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7953 43.1 126.0 455560.0 25 0 57364.0 + 13893 HVQNMIKGV 9 93 513.2810972750474 1024.547641616895 2 513.2819702029228 MULTI CID FTMS 0 0 0 7948 423872.15625 0.4878918628126931 5 -0.1008033752441406 5 Unmodified _HVQNMIKGV_ ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000514842.5_1_4:39459094-39460113:-|nuORF;ENST00000561773.1_1_15:66671752-66672088:-|nuORF 61.357469665136826 0.0253304979873734 4 [HV]QNM{I|L}KGV 9 0 + 68.234 0.0 0.0 6.66 6.66 88.789 0.0 0.0 0.0 17.337321105952313 16.348943214391284 16.348943214391284 9.208187539523756 0 1.2128493362984765 2.0 0.0 0.3252574989159953 + + [HV]QNM{I|L}KGV;[HV]QGGM{I|L}KGV;[HV][AG]NM{I|L}KGV;[HV]QMN{I|L}KGV;[VG][HA]NM{I|L}KGV;[HV]QMGG{I|L}KGV;[HV][AG]MN{I|L}KGV;[VG]{[C(Carbamidomethyl (C))G]|[NC]}VH{I|L}KGV;[VG][HA]MN{I|L}KGV;[HV][{M(Oxidation (M))|F}E]P{I|L}KR 6.66;5.7612;5.7612;5.6839;4.9678;4.7852;4.7852;4.2594;3.9917;3.5472 +;-;-;-;-;-;-;-;-;- + 241 1 1.774 47098.6 1.0 3466 4485 7948 HBL1_DMSO_200M_050219_2,7953 HBL1_DMSO_200M_050219_2,7953,HVQNMIKGV True True HVQNMIKGV 43.099717 513.281970202923 18092778.0 7948.0 ENSG00000163682|ENST00000295955|RPL9;;ENST00000514842.5_1_4:39459094-39460113:-|nuORF;;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;;ENST00000561773.1_1_15:66671752-66672088:-|nuORF;;ENST00000439124.1_1_6:64325734-64326112:-|nuORF 6.705414295196533 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7954 43.102 96.0 457170.0 25 0 42145.0 + 39432 VAMNPTNTV 9 84 473.7365847800897 945.4586166269794 2 473.7369567751884 MULTI CID FTMS 0 0 0 7948 406477.65625 0.6692991926700712 4 -0.0927772521972656 6 Unmodified _VAMNPTNTV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 30.22481116460888 0.1466181017706357 4 {[QS]|[NT]}PTV 5 5 31.727 0.0 0.0 3.3557 0.0 0.0 0.0 430.17544947293567 430.17544947293567 12.0205343810445 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3054621874040891 0.0 {[QS]|[NT]}PTV 3.3557 - 106 1 1.774 37606.6 1.0 3467 4485 7948 HBL1_DMSO_200M_050219_2,7954 HBL1_DMSO_200M_050219_2,7954,VAMNPTNTV False True VAMNPTNTV 43.101805 473.736956775188 10244743.0 7948.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 5.386377493540446 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7955 43.104 111.0 374060.0 25 0 36158.0 + -1 EVPSSMQPV 9 73 495.2334217574287 988.4522905816574 2 495.2336303591728 MULTI CID FTMS 0 0 0 7948 332117.53125 0.6173346089235552 -6 0.2051429748535156 7 Oxidation (M) _EVPSSM(Oxidation (M))QPV_ REV__ENSG00000132549|ENST00000357162|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8-6|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8|VPS13B 28.486842064014134 0.1687311288560894 4 [{I|L}T]Q 3 -1 29.978 0.0 0.0 3.0328 0.0 0.0 0.0 643.2388560936292 643.2388560936292 8.807196863200843 0.0 0.0 0.0 0 0.5 2.0 0.0 0.3807196863200844 [{I|L}T]Q 3.0328 - 126 1 1.774 38947.4 1.0 3468 4485 7948 HBL1_DMSO_200M_050219_2,7955 HBL1_DMSO_200M_050219_2,7955,EVPSSMQPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7957 43.113 336.0 253740.0 25 0 28574.0 + 2740 ATIGDVKGDEV 11 125 552.2815014091825 1102.548449885165 2 552.2827026247978 MULTI CID FTMS 0 0 0 7956 182773.359375 0.7080547091211953 -3 0.1112289428710937 1 Unmodified _ATIGDVKGDEV_ ENSG00000102098|ENST00000251900|SCML2 30.7034409873982 0.3712764582118616 4 [TA]{I|L}GDV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SD 10 4 54.609 0.0 0.0 4.953 0.0 0.0 0.0 82.06696497134999 82.06696497134999 32.05620496817181 0.0 0.0 0.0 0 0.6861818737241735 1.5228787452803376 1.1883753548010496 0.0 [TA]{I|L}GDV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SD 4.953 - 3390 + 1 1.774 69898.9 1.0 3469 4486 7956 HBL1_DMSO_200M_050219_2,7957 HBL1_DMSO_200M_050219_2,7957,ATIGDVKGDEV False True ATIGDVKGDEV 43.112542 552.282702624798 1573497.375 7956.0 ENSG00000102098|ENST00000251900|SCML2 6.188828786214192 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7958 43.114 41.0 1630900.0 25 0 245590.0 + 34921 SQIPAQPSV 9 77 463.7503539934432 925.4861550536864 2 463.7506896853447 MULTI CID FTMS 0 0 0 7956 1512490.625 0.2116537375168125 -7 0.2209663391113281 2 Unmodified _SQIPAQPSV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 59.36838082759317 0.0264317782606298 4 {[QS]|[NT]}{I|L}PAQ 6 3 37.87 0.0 0.0 4.092 0.0 0.0 0.0 298.139328231674 298.139328231674 9.53808523823382 0.0 0.0 0.0 0 1.2134679910804405 0.8239087409443188 0.0 0.535666875892183 + {[QS]|[NT]}{I|L}PAQ 4.092 + + 428 1 1.774 59457.1 1.0 3470 4486 7956 HBL1_DMSO_200M_050219_2,7958 HBL1_DMSO_200M_050219_2,7958,SQIPAQPSV True True SQIPAQPSV 43.113719 463.750689685345 200775360.0 7956.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 6.537379900614421 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7959 43.116 106.0 521940.0 25 0 40917.0 + 5671 DPFSVKRNV 9 94 531.2902580369018 1060.5659631406036 2 531.2909423708916 MULTI CID FTMS 0 0 0 7956 237198.09375 0.4712582262396658 -5 0.1441764831542968 3 Unmodified _DPFSVKRNV_ ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3-2|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4 38.17557092003332 0.0854718145212029 4 DP{M(Oxidation (M))|F}SVK 6 3 59.936 0.0 0.0 5.6513 0.0 0.0 0.0 384.1987703912719 384.1987703912719 38.96718187225762 0.0 0.0 0.0 0 0.6989700043360187 1.6989700043360187 0.0 0.3807196863200844 + DP{M(Oxidation (M))|F}SVK 5.6513 + + 134 + 1 1.774 52142.9 1.0 3471 4486 7956 HBL1_DMSO_200M_050219_2,7959 HBL1_DMSO_200M_050219_2,7959,DPFSVKRNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7960 43.126 550.0 238240.0 25 0 21182.0 -1 0 142 483.2803538708772 482.2730774042772 1 483.2809631228447 MULTI CID FTMS 0 0 0 7956 134043.8125 0.1213501060108419 14 -0.5091438293457031 4 4 {I|L} 1 -1 10.379 0.0 0.0 2.152 0.0 0.0 351.17811998415846 0.0 351.17811998415846 0.0 0.2899597348884342 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.152 - 31 + 1 1.774 102220.1 1.0 3472 4486 7956 HBL1_DMSO_200M_050219_2,7960 HBL1_DMSO_200M_050219_2,7960, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 7962 43.133 292.0 257630.0 25 0 29452.0 + 27361 PHVRLRCV 8 108 490.28535700236114 0 490.2849609255791 PEAK CID FTMS 0 0 0 7961 143163.046875 0.5830930887912135 -4 0.1326904296875 1 Unmodified _PHVRLRCV_ REV__ENST00000532094.5_1_11:420655-431830:-|nuORF 2.302733041254933 0.5920993303473642 4 G 1 -1 2.2185 0.0 0.0 0.22671 0.0 0.0 488.3770666885129 430.1413668268188 918.5184335153316 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.22671 - 2 + 1 1.774 60193.4 1.0 3473 4487 7961 HBL1_DMSO_200M_050219_2,7962 HBL1_DMSO_200M_050219_2,7962,PHVRLRCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7963 43.136 158.0 476930.0 25 0 52821.0 + 39146 TYLNQGQSY 9 97 537.2482546523685 1072.4819563715369 2 537.2488281130791 MULTI CID FTMS 0 0 0 7961 350213.84375 1.0 0 0.0 2 Unmodified _TYLNQGQSY_ ENSG00000115112|ENST00000263707|TFCP2L1;ENSG00000135457|ENST00000257915|TFCP2;ENSG00000153560|ENST00000283629|UBP1;nc|ENSG00000135457|Q12800-2|TFCP2;nc|ENSG00000135457|Q12800-3|TFCP2;nc|ENSG00000135457|Q12800-4|TFCP2;nc|ENSG00000153560|Q9NZI7-4|UBP1 20.453626601364224 0.2830276176381075 4 [YT]{I|L}N{I|L}D{I|L}{I|L} 8 5 46.833 0.0 0.0 4.3668 0.0 0.0 0.0 123.94361833291455 123.94361833291455 24.754406279932653 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.4247425010840047 0.0 [YT]{I|L}N{I|L}D{I|L}{I|L} 4.3668 - 209 1 1.774 60533.2 1.0 3474 4487 7961 HBL1_DMSO_200M_050219_2,7963 HBL1_DMSO_200M_050219_2,7963,TYLNQGQSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7964 43.141 278.0 598860.0 25 0 120390.0 29971 QSVSPGGTTM 10 104 482.7240643383242 963.4335757434484 2 482.7236816287041 MULTI CID FTMS 0 0 0 7961 160410.546875 0.1357683531784866 -8 0.2424278259277343 3 Unmodified _QSVSPGGTTM_ ENSG00000085465|ENST00000369732|OVGP1 15.248480904072842 0.5916873121453583 4 VSQPE[HA]G 8 8 25.904 0.0 0.0 2.6887 0.0 0.0 0.0 155.04641138248283 155.04641138248283 10.385075495668278 0.0 0.0 0.0 0 0.6069758080123702 0.0 0.0 0.4247425010840047 VSQPE[HA]G 2.6887 - 128 + 1 1.774 131532.1 1.0 3475 4487 7961 HBL1_DMSO_200M_050219_2,7964 HBL1_DMSO_200M_050219_2,7964,QSVSPGGTTM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7966 43.146 66.0 1498100.0 25 0 285860.0 + 10839 GAAKDLPGV 9 89 414.23447368183207 826.4543944304642 2 414.2347595095634 MULTI CID FTMS 0 0 0 7965 912394.8125 0.2893689412339686 8 -0.2297630310058593 1 Unmodified _GAAKDLPGV_ ENSG00000240682|ENST00000393295|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1;nc|ENSG00000240682|Q9ULR0-2|ISY1 28.486842064014134 0.1687311288560894 4 [EP]{I|L} 3 8 23.301 0.0 0.0 2.8194 0.0 0.0 0.0 484.2590568662642 484.2590568662642 2.889596516319344 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [EP]{I|L} 2.8194 - 398 1 1.774 82169.7 1.0 3476 4488 7965 HBL1_DMSO_200M_050219_2,7966 HBL1_DMSO_200M_050219_2,7966,GAAKDLPGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7967 43.16 800.0 297630.0 25 0 15829.0 + 5444 DLPSRLGHF 9 195 521.2765461675672 1040.5385394019345 2 521.2779418826103 MULTI CID FTMS 0 0 0 7965 186346.625 0.5236842953428472 -12 0.4287033081054687 2 Unmodified _DLPSRLGHF_ REV__ENSG00000113721|ENST00000261799|PDGFRB;REV__ENST00000520579.5_1_5:149495328-149514444:-|nuORF 13.042465956692816 0.4836390050082244 4 {NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]PGV{[QG]|[NA]} 10 -1 + 24.006 0.0 0.0 2.3071 2.3071 75.342 0.0 0.0 0.0 3.1158382535459594 7.808575858109989 3.1158382535459594 10.644038680813493 0 0.5 1.154901959985743 0.4604093769761875 0.0 {NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]PGV{[QG]|[NA]};{[HG]|PP}[RH]PPR{[QG]|[NA]};{[{M(Oxidation (M))|F}H]|[RQ]}HVP[YE]{I|L};{[HG]|PP}[VG]HPPGV{[QG]|[NA]};[Q{I|L}][{M(Oxidation (M))|F}V]PPGV{[QG]|[NA]};[KA][C(Carbamidomethyl (C))K]PPGV{[QG]|[NA]};[Q{I|L}][{M(Oxidation (M))|F}V]PPR{[QG]|[NA]};{[TV]|[{I|L}S]}D[R{I|L}]PGH{M(Oxidation (M))|F};[AG]{I|L}[{M(Oxidation (M))|F}V]PPGV{[QG]|[NA]};{[{M(Oxidation (M))|F}H]|[RQ]}HVP{[QN]|[E{I|L}]|[KN]}Y 2.3071;1.2842;1.0628;1.0482;0.85224;0.81015;0.80308;0.68156;0.6377;0.60425 -;-;-;-;-;-;-;-;-;- 945 1 1.774 184934.2 0.7200000286102295 3477 4488 7965 HBL1_DMSO_200M_050219_2,7967 HBL1_DMSO_200M_050219_2,7967,DLPSRLGHF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7968 43.162 91.0 577620.0 25 0 49667.0 + 11299 GEVERWQL 8 82 508.76099627698153 1015.5074396207632 2 508.7584716677666 MULTI CID FTMS 0 0 0 7965 590062.0 0.306068261482173 12 -0.4718208312988281 3 Unmodified _GEVERWQL_ REV__nc|ENSG00000085831|Q5SRH9-3|TTC39A 36.04419817259434 0.3004715606373109 4 {[DA]|[EG]}P{M(Oxidation (M))|F}T[KP]Q{I|L} 9 -1 + 51.188 0.0 0.0 5.0407 5.0407 83.99 0.0 0.0 0.0 15.399214004031483 13.740984232451012 13.740984232451012 13.015384402724592 0 0.0 2.0 0.0 0.805462187404089 {[DA]|[EG]}P{M(Oxidation (M))|F}T[KP]Q{I|L};{[DA]|[EG]}P{M(Oxidation (M))|F}T[KP][AG]{I|L};{I|L}PEN[R{M(Oxidation (M))|F}]Q{I|L};{[DA]|[EG]}P{M(Oxidation (M))|F}T[KP]AAV;{I|L}PEGG[R{M(Oxidation (M))|F}]Q{I|L};{I|L}PEN[R{M(Oxidation (M))|F}][AG]{I|L};{I|L}PEN[R{M(Oxidation (M))|F}]AAV 5.0407;3.759;3.2729;3.0539;2.3608;1.9859;1.2808 -;-;-;-;-;-;- 106 + 1 1.774 48185.2 1.0 3478 4488 7965 HBL1_DMSO_200M_050219_2,7968 HBL1_DMSO_200M_050219_2,7968,GEVERWQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7969 43.167 298.0 494690.0 25 0 74593.0 + 41181 VPDQPHPEI 9 143 516.2609455430522 1030.5073381529044 2 516.2622558474541 MULTI CID FTMS 0 0 0 7965 187340.3125 0.0455603978563496 -14 0.4837570190429687 4 Unmodified _VPDQPHPEI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 40.23920728925047 0.0741434193262949 4 VPDQPH[EP]{I|L} 9 0 + 57.511 0.0 0.0 5.5809 5.5809 80.466 0.0 0.0 0.0 14.844263994037108 2.5477287997883025 2.5477287997883025 6.275482985105626 0 1.336696871556164 1.3979400086720375 0.6549471895720985 0.3807196863200844 + + VPDQPH[EP]{I|L};[EP]NHPEP{I|L}V;[DP]QHPEP{I|L}V;VPD[AG]PH[EP]{I|L};VPDQ[TA][C(Carbamidomethyl (C))K]{I|L};[EP]GGHPEP{I|L}V;VPDQ[KT][MN]V;VPDQ[KT]{[QC]|[C(Carbamidomethyl (C))A]}{I|L};[DP][AG]HPEP{I|L}V;VP[WC(Carbamidomethyl (C))]{[QS]|[NT]}RV 5.5809;4.9719;4.3877;4.3179;4.0021;3.8247;3.5272;3.4546;3.2404;2.9575 +;-;-;-;-;-;-;-;-;- + 1557 + 1 1.774 117514.7 1.0 3479 4488 7965 HBL1_DMSO_200M_050219_2,7969 HBL1_DMSO_200M_050219_2,7969,VPDQPHPEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7970 43.181 800.0 124020.0 25 0 11837.0 + -1 VEKSMRTEM 9 134 563.7636793946695 0 563.7640258669853 PEAK CID FTMS 0 0 0 7965 79824.0625 1.0 0 0.0 5 Oxidation (M) _VEKSM(Oxidation (M))RTEM_ REV__ENST00000462792.1_1_3:87780725-87780770:-|nuORF 19.256988751693697 0.2078072434435185 4 EVA 3 -1 24.693 0.0 0.0 2.1939 0.0 0.0 149.0476422118524 674.291844643034 823.3394868548864 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 EVA 2.1939 - 277 + 1 1.774 80128.3 0.6000000238418579 3480 4488 7965 HBL1_DMSO_200M_050219_2,7970 HBL1_DMSO_200M_050219_2,7970,VEKSMRTEM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7972 43.186 5.7 9210600.0 25 0 632590.0 + 4241 DAPMTPKQI 9 67 500.760018192245 999.5054834512902 2 500.7605773806572 MULTI CID FTMS 0 0 0 7971 9681191.0 0.9505750025798848 -2 0.0554924011230468 1 Unmodified _DAPMTPKQI_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1 41.8396318013385 0.0653578398400075 4 {[DA]|[EG]}PMTPKQ{I|L} 9 0 + 56.889 0.0 0.0 5.6917 5.6917 86.669 0.0 0.0 0.0 39.00900915657069 15.106442888633254 15.106442888633254 12.703037561203844 0 0.5044321917401079 2.0 0.0 0.7742275032520141 + + {[DA]|[EG]}PMTPKQ{I|L};{[DA]|[EG]}PMTPK[AG]{I|L} 5.6917;4.4208 +;- + 177 + 1 1.774 45931.8 1.0 3481 4489 7971 HBL1_DMSO_200M_050219_2,7972 HBL1_DMSO_200M_050219_2,7972,DAPMTPKQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7973 43.187 18.0 2703200.0 25 0 292910.0 + 8979 FASHVSPEV 9 65 486.7427199742478 971.4708870152956 2 486.7431518435478 MULTI CID FTMS 0 0 0 7971 3322169.0 0.93386514838375 -2 0.0554924011230468 2 Unmodified _FASHVSPEV_ ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3 50.855029805455786 0.0384952370514206 4 [HS]A{M(Oxidation (M))|F}VS[EP]V 9 4 + 43.86 0.0 0.0 4.5149 4.5149 76.17 0.0 0.0 0.0 5.444087325889981 22.43378736925017 5.444087325889981 6.430446019098064 0 0.9247425010840048 0.0 0.75 0.0 [HS]A{M(Oxidation (M))|F}VS[EP]V;[HS]VA{M(Oxidation (M))|F}S[EP]V;{[MS]|[{M(Oxidation (M))|F}A]}[HS]VS[EP]V;[HS]VSA{M(Oxidation (M))|F}[EP]V;[HS]AV{M(Oxidation (M))|F}S[EP]V;[HS]VAS{M(Oxidation (M))|F}[EP]V;[HS]AVS{M(Oxidation (M))|F}[EP]V;[EP]V{[WS]|[C(Carbamidomethyl (C)){I|L}]}QQV;{NN|[MP]|[D{I|L}]|[EV]}[DV]VGQQV;[TP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VGQQV 4.5149;3.8529;3.6956;3.612;3.3101;3.2332;2.6904;2.6899;2.4809;2.3523 -;-;+;-;-;-;-;-;-;- + 340 1 1.774 46996.8 1.0 3482 4489 7971 HBL1_DMSO_200M_050219_2,7973 HBL1_DMSO_200M_050219_2,7973,FASHVSPEV True True FASHVSPEV 43.186814 486.743151843548 49493404.0 7971.0 nc|ENSG00000242247|Q9NP61-2|ARFGAP3;;ENSG00000242247|ENST00000263245|ARFGAP3 7.654481569925944 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7974 43.188 35.0 1468200.0 25 0 241930.0 + 6536 EALGNVRTV 9 67 479.7692879751714 957.5240230171428 2 479.7697021365166 MULTI CID FTMS 0 0 0 7971 1402298.25 0.6830245145490236 4 -0.0933570861816406 3 Unmodified _EALGNVRTV_ ENSG00000197150|ENST00000358849|ABCB8;ENST00000466514.5_1_7:150731570-150742433:+|nuORF;ENST00000470645.5_1_7:150732911-150733055:+|nuORF;nc|ENSG00000197150|Q9NUT2-3|ABCB8;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-5|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8 43.77239144664712 0.0547478964384323 4 {[CP]|[EA]}{I|L}GNVRTV 9 0 + 54.659 0.0 0.0 5.7083 5.7083 84.516 0.0 0.0 0.0 40.39381281052492 14.125080446669926 14.125080446669926 9.208187539523747 0 0.5 0.0 0.4247425010840047 0.3807196863200844 + + {[CP]|[EA]}{I|L}GNVRTV;{[CP]|[EA]}{I|L}GGGVRTV;{[CP]|[EA]}VANVRTV;{[CP]|[EA]}VAGGVRTV;{[CP]|[EA]}{I|L}[RN]RTV 5.7083;4.7467;4.6819;3.7203;3.3879 +;-;-;-;- + 115 + 1 1.774 45300.6 1.0 3483 4489 7971 HBL1_DMSO_200M_050219_2,7974 HBL1_DMSO_200M_050219_2,7974,EALGNVRTV True True EALGNVRTV 43.187994 479.769702136517 25079008.0 7971.0 nc|ENSG00000197150|Q9NUT2|ABCB8;;ENST00000470645.5_1_7:150732911-150733055:+|nuORF;;ENSG00000197150|ENST00000358849|ABCB8;;nc|ENSG00000197150|Q9NUT2-5|ABCB8;;nc|ENSG00000197150|Q9NUT2-4|ABCB8;;nc|ENSG00000197150|Q9NUT2-3|ABCB8;;ENST00000466514.5_1_7:150731570-150742433:+|nuORF 6.225130558013916 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7975 43.189 34.0 1630100.0 25 0 196120.0 + -1 PSPPIERV 8 69 468.7613374718353 935.5081220104706 2 468.7618591189384 MULTI CID FTMS 0 0 0 7971 1375527.25 1.0 0 0.0 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PSPPIERV_ REV__ENST00000313543.4_1_7:150217976-150218036:+|nuORF 20.453626601364224 0.6087503291685402 4 [EP]PPV[W{I|L}]V 8 -1 + 43.707 0.0 0.0 4.672 4.672 85.204 0.0 0.0 0.0 31.488343711055933 3.645162531850872 3.645162531850872 43.70683120721949 0 0.2614393726401688 1.5228787452803376 0.0 0.0 [EP]PPV[W{I|L}]V 4.672 - 57 + 1 1.774 49593.3 1.0 3484 4489 7971 HBL1_DMSO_200M_050219_2,7975 HBL1_DMSO_200M_050219_2,7975,PSPPIERV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7977 43.197 332.0 384400.0 25 0 32556.0 + 21869 LPPEQVTKV 9 132 505.7971851353432 1009.5798173374864 2 505.7974120974541 MULTI CID FTMS 0 0 0 7976 317763.0625 0.8625009616643073 26 -1.4570884704589844 1 Unmodified _LPPEQVTKV_ ENSG00000124920|ENST00000278836|MYRF;nc|ENSG00000124920|Q9Y2G1-2|MYRF 26.020703789607367 0.2001090068861241 4 {I|L}PPEQVTKV 9 0 + 59.005 0.0 0.0 5.8445 5.8445 85.092 0.0 0.0 0.0 28.77932370125422 11.42667503568731 11.42667503568731 9.208187539523747 0 0.6643943297944485 2.0 0.0 0.0 + + {I|L}PPEQVTKV;{I|L}PPE[AG]VTKV;{I|L}V[YE]{M(Oxidation (M))|F}{I|L}KV;{I|L}[{I|L}T]KD[QP]PV;{I|L}[{I|L}T]KD[QP]VP 5.8445;4.9324;1.9952;1.0355;0.34318 +;-;-;-;- + 619 + 1 1.774 99879.6 1.0 3485 4490 7976 HBL1_DMSO_200M_050219_2,7977 HBL1_DMSO_200M_050219_2,7977,LPPEQVTKV False True LPPEQVTKV 43.197435 505.797412097454 20788138.0 7976.0 nc|ENSG00000124920|Q9Y2G1-2|MYRF;;ENSG00000124920|ENST00000278836|MYRF 4.970402081807454 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7978 43.202 223.0 449180.0 25 0 49655.0 3347 AYNRRLLH 8 117 348.20165255162914 0 348.2016479372978 PEAK CID FTMS 0 0 0 7976 144120.890625 0.5643377444788892 13 -0.5303230285644531 2 Unmodified _AYNRRLLH_ ENSG00000173175|ENST00000462833|ADCY5;ENSG00000174233|ENST00000357869|ADCY6;ENST00000547260.5_1_12:49165333-49167887:-|nuORF;ENST00000552099.5_1_12:49165333-49167571:-|nuORF;nc|ENSG00000173175|O95622-2|ADCY5;nc|ENSG00000174233|O43306-2|ADCY6 2.889219685676258 0.5898224805723975 4 A 1 7 1.5938 0.0 0.0 0.22952 0.0 0.0 347.2174697185381 273.1162022168026 620.3336719353407 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.22952 + + 2 + 1 1.774 86149.5 1.0 3486 4490 7976 HBL1_DMSO_200M_050219_2,7978 HBL1_DMSO_200M_050219_2,7978,AYNRRLLH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7979 43.212 598.0 353880.0 25 0 21451.0 + 16589 KDLQQTKTL 9 227 358.87571417151423 1073.6053131147428 3 359.2095825076103 MULTI CID FTMS 0 0 0 7976 149025.59375 0.9370704521374428 2 -0.069976806640625 3 Unmodified _KDLQQTKTL_ ENSG00000174844|ENST00000495027|DNAH12;nc|ENSG00000174844|Q6ZR08-2|DNAH12;nc|ENSG00000174844|Q6ZR08-3|DNAH12;nc|ENSG00000174844|Q6ZR08|DNAH12 10.150570793230772 0.5619192000662246 4 T{I|L} 2 7 18.85 0.0 0.0 1.7558 0.0 0.0 841.4622752502881 0.0 841.4622752502881 0.0 9.64198094270153 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 + T{I|L} 1.7558 + + 230 + 1 1.774 164984.4 1.0 3487 4490 7976 HBL1_DMSO_200M_050219_2,7979 HBL1_DMSO_200M_050219_2,7979,KDLQQTKTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7981 43.228 800.0 115530.0 25 0 10823.0 + 33370 SGIPEKDLHSV 11 127 591.3117058555949 1180.6088587779898 2 591.3115722537041 MULTI CID FTMS 0 0 0 7980 81547.6640625 0.2126031638824978 14 -0.5711746215820312 1 Unmodified _SGIPEKDLHSV_ ENSG00000160783|ENST00000368277|PMF1;ENST00000606952.5_1_1:156203463-156206310:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 36.95490438235368 0.2593041297346161 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}HQSVAW 10 8 + 53.484 0.0 0.0 4.5302 4.5302 66.379 0.0 0.0 0.0 0.3258344212375164 4.3702218708737135 0.3258344212375164 0.3258344212375164 0 1.242992819099939 1.2218487496163564 0.3252574989159953 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}HQSVAW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEKD{I|L}HSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}QHSVAW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PQ{I|L}HSVAW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VSQH{I|L}HSV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WQH{I|L}HSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PWW{I|L}HSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}H[AG]SVAW;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}HSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}QHSV 4.5302;4.5026;4.1261;4.0851;3.9237;3.8804;3.7852;3.754;3.6794;3.6383 -;-;-;-;-;-;-;-;-;- 2569 1 1.774 71641.9 0.6800000071525574 3488 4491 7980 HBL1_DMSO_200M_050219_2,7981 HBL1_DMSO_200M_050219_2,7981,SGIPEKDLHSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7982 43.232 177.0 581130.0 25 0 38173.0 + -1 AFRMVQLNE 9 114 375.190208200284 1122.548795201052 3 375.1901428103447 MULTI CID FTMS 0 0 0 7980 303846.28125 0.148081363992992 -7 0.1939888000488281 2 Oxidation (M) _AFRM(Oxidation (M))VQLNE_ REV__ENSG00000137807|ENST00000679126|KIF23;REV__nc|ENSG00000137807|Q02241-2|KIF23;REV__nc|ENSG00000137807|Q02241-3|KIF23;REV__nc|ENSG00000137807|Q02241|KIF23 7.101721422024254 0.6667666702315642 4 YTM 3 -1 26.198 0.0 0.0 2.3338 0.0 0.0 0.0 724.3549945090117 724.3549945090117 11.593793813122062 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YTM 2.3338 - 268 + 1 1.774 90795.9 1.0 3489 4491 7980 HBL1_DMSO_200M_050219_2,7982 HBL1_DMSO_200M_050219_2,7982,AFRMVQLNE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7983 43.245 800.0 261970.0 25 0 45780.0 + 26771 PAGAPAAA 8 118 625.329791855361 624.322515388761 1 625.3308593630791 MULTI CID FTMS 0 0 0 7980 110349.015625 0.7431896214344096 -2 0.0308761596679687 3 Unmodified _PAGAPAAA_ REV__ENSG00000166126|ENST00000299155|AMN;REV__ENST00000541086.5_1_14:103389974-103397014:+|nuORF;REV__ENST00000558590.1_1_14:103395319-103397951:+|nuORF;REV__ENST00000559507.1_1_14:103396518-103396893:+|nuORF 17.086550045450526 0.6584923310065985 4 {I|L}PAQD 5 -1 54.203 0.0 0.0 8.682 0.0 0.0 0.0 97.04133783511952 97.04133783511952 9.493388489695375 0.0 0.0 0.0 0 0.9258337024346172 0.7695510786217261 0.9634679910804403 0.7059771852360797 {I|L}PAQD 8.682 - 658 + 1 1.774 155315.0 0.6499999761581421 3490 4491 7980 HBL1_DMSO_200M_050219_2,7983 HBL1_DMSO_200M_050219_2,7983,PAGAPAAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7984 43.259 800.0 147320.0 25 0 25974.0 -1 MFQNRVRPL 9 89 588.8187404455848 1175.6229279579695 2 588.8193847537041 MULTI CID FTMS 0 0 0 7980 103619.2578125 0.9222341247204427 -2 0.0308761596679687 4 Oxidation (M) _M(Oxidation (M))FQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 16.942295170755138 0.3780752226737986 4 R[{I|L}P] 3 -1 13.072 0.0 0.0 1.1119 0.0 0.0 791.3716595026946 0.0 791.3716595026946 0.0 2.614393726401687 0.0 0.0 0 0.5 0.0 0.0 0.0 R[{I|L}P] 1.1119 + + 35 + 1 1.774 93619.0 0.6399999856948853 3491 4491 7980 HBL1_DMSO_200M_050219_2,7984 HBL1_DMSO_200M_050219_2,7984,MFQNRVRPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 7986 43.266 178.0 516810.0 25 0 62814.0 1597 ALLKGAGA 8 122 350.7213170772315 699.428081221263 2 350.7210876345634 MULTI CID FTMS 0 0 0 7985 327104.5 0.0675473862866443 12 -0.5058822631835938 1 Unmodified _ALLKGAGA_ ENSG00000165591|ENST00000374900|FAAH2 14.581692164780916 0.6954967302934248 4 [{I|L}A]{I|L}EVR 6 5 + 52.535 0.0 0.0 7.5111 7.5111 93.82 0.0 0.0 0.0 41.93863644679641 15.099555848308276 15.099555848308276 16.121381029421904 0 0.4247425010840047 2.0 0.0 0.5891368308784531 [{I|L}A]{I|L}EVR;[{I|L}A]V{[QN]|[E{I|L}]|[KN]}R;G{I|L}{I|L}{[QN]|[E{I|L}]|[KN]}R 7.5111;5.2061;1.309 -;-;- 61 + 1 1.774 76266.1 1.0 3492 4492 7985 HBL1_DMSO_200M_050219_2,7986 HBL1_DMSO_200M_050219_2,7986,ALLKGAGA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7987 43.267 63.0 981280.0 25 0 90270.0 + 38526 TSPSTPSTL 9 89 445.72650170947264 889.4384504857453 2 445.7270080447197 MULTI CID FTMS 0 0 0 7985 1001075.0625 1.0 0 0.0 2 Unmodified _TSPSTPSTL_ REV__ENSG00000110934|ENST00000615107|BIN2;REV__ENST00000503900.1_1_5:75206464-75206944:+|nuORF;REV__ENST00000605039.5_1_12:51675285-51695971:-|nuORF;REV__nc|ENSG00000110934|Q9UBW5-2|BIN2;REV__nc|ENSG00000110934|Q9UBW5-3|BIN2 28.486842064014134 0.1687311288560894 4 {[DA]|[EG]}VSVP[R{M(Oxidation (M))|F}] 8 -1 + 40.724 0.0 0.0 4.5786 4.5786 83.168 0.0 0.0 0.0 21.21523434085148 2.218487496163561 2.218487496163561 18.29303772831025 0 0.0 1.5228787452803376 0.6109243748081782 0.0 {[DA]|[EG]}VSVP[R{M(Oxidation (M))|F}];{[DA]|[EG]}[PA]T{I|L}[R{M(Oxidation (M))|F}];[PS]TSVP[R{M(Oxidation (M))|F}];[PS]STVP[R{M(Oxidation (M))|F}];{[SA]|[TG]}[DV]VP[R{M(Oxidation (M))|F}] 4.5786;2.5219;1.4551;1.0621;0.76299 -;-;-;-;- 95 1 1.774 54561.2 1.0 3493 4492 7985 HBL1_DMSO_200M_050219_2,7987 HBL1_DMSO_200M_050219_2,7987,TSPSTPSTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7988 43.27 131.0 630610.0 25 0 51641.0 + 43071 VYITGKEV 8 84 454.7584830893822 907.5024132455644 2 454.7574645876884 MULTI CID FTMS 0 0 0 7985 346884.375 0.8137709191206145 -2 0.069976806640625 3 Unmodified _VYITGKEV_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 19.256988751693697 0.6264283240490721 4 [YV]{I|L}[{M(Oxidation (M))|F}V]TGG 8 5 34.932 0.0 0.0 3.8492 0.0 0.0 0.0 68.05137048892811 68.05137048892811 11.955999313992224 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.535666875892183 0.0 [YV]{I|L}[{M(Oxidation (M))|F}V]TGG 3.8492 - 256 + 1 1.774 70701.3 1.0 3494 4492 7985 HBL1_DMSO_200M_050219_2,7988 HBL1_DMSO_200M_050219_2,7988,VYITGKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7989 43.275 252.0 316130.0 25 0 17235.0 + 6456 EAFKNRMEV 9 95 562.2816748229858 1122.5487967127715 2 562.2825195193291 MULTI CID FTMS 0 0 0 7985 235496.875 0.3314122368204057 -6 0.1549568176269531 4 Unmodified _EAFKNRMEV_ ENSG00000123562|ENST00000441076|MORF4L2 21.799462835604743 0.2538179108695974 4 EA{M(Oxidation (M))|F}KN 5 4 50.662 0.0 0.0 4.5131 0.0 0.0 0.0 530.2390841119749 530.2390841119749 5.907883750575493 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 + EA{M(Oxidation (M))|F}KN 4.5131 + + 269 + 1 1.774 64196.5 1.0 3495 4492 7985 HBL1_DMSO_200M_050219_2,7989 HBL1_DMSO_200M_050219_2,7989,EAFKNRMEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7991 43.28 161.0 358150.0 25 0 22768.0 + 2199 AQAPPTAQL 9 103 448.7451664676896 895.4757800021791 2 448.7453491091728 MULTI CID FTMS 0 0 0 7990 346599.5 0.5754886876917097 11 -0.4905281066894531 1 Unmodified _AQAPPTAQL_ ENSG00000118513|ENST00000341911|MYB;nc|ENSG00000118513|P10242-10|MYB;nc|ENSG00000118513|P10242-11|MYB;nc|ENSG00000118513|P10242-12|MYB;nc|ENSG00000118513|P10242-2|MYB;nc|ENSG00000118513|P10242-3|MYB;nc|ENSG00000118513|P10242-5|MYB;nc|ENSG00000118513|P10242-6|MYB;nc|ENSG00000118513|P10242-7|MYB;nc|ENSG00000118513|P10242-8|MYB;nc|ENSG00000118513|P10242-9|MYB;nc|ENSG00000118513|P10242|MYB 45.69961567697781 0.0497987121815769 4 [PA][TP]QAAQ{I|L} 9 4 + 28.755 0.0 0.0 3.2112 3.2112 63.719 0.0 0.0 0.0 1.1293062379478158 3.95708370663683 1.1293062379478158 1.1293062379478158 0 0.6822333069283655 0.7958800173440752 1.3807196863200843 0.0 [PA][TP]QAAQ{I|L};[AG]A[TP]PAAQ{I|L};[QA][TP]PAAQ{I|L};[PA][TP][AG]AAQ{I|L};[PA][QT]PAAQ{I|L};[VP][NS]PAAQ{I|L};[PA][PG][TA]AAQ{I|L};[PG][PA][TA]AAQ{I|L} 3.2112;3.0851;2.8051;2.1829;2.0566;1.3222;0.93094;0.54505 -;-;-;-;-;-;-;- 192 1 1.774 47832.3 1.0 3496 4493 7990 HBL1_DMSO_200M_050219_2,7991 HBL1_DMSO_200M_050219_2,7991,AQAPPTAQL True True AQAPPTAQL 43.279912 448.745349109173 32524912.0 7990.0 nc|ENSG00000118513|P10242-10|MYB;;nc|ENSG00000118513|P10242-3|MYB;;nc|ENSG00000118513|P10242-9|MYB;;nc|ENSG00000118513|P10242-12|MYB;;nc|ENSG00000118513|P10242|MYB;;nc|ENSG00000118513|P10242-6|MYB;;ENSG00000118513|ENST00000341911|MYB;;nc|ENSG00000118513|P10242-8|MYB;;nc|ENSG00000118513|P10242-5|MYB;;nc|ENSG00000118513|P10242-7|MYB;;nc|ENSG00000118513|P10242-11|MYB;;nc|ENSG00000118513|P10242-2|MYB 7.225584665934245 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7992 43.289 503.0 192510.0 25 0 13091.0 + 21883 LPPESTQV 8 135 435.7319671401997 869.4493813471995 2 435.7320129275322 MULTI CID FTMS 0 0 0 7990 150050.484375 0.4618960108208911 37 -2.6783409118652344 2 Unmodified _LPPESTQV_ ENSG00000095059|ENST00000210060|DHPS;ENST00000593473.1_1_19:12790962-12792580:-|nuORF;nc|ENSG00000095059|P49366-2|DHPS 38.15118350030904 0.2652218139009398 4 [{I|L}P]A 3 6 23.473 0.0 0.0 2.6997 0.0 0.0 0.0 585.2682411077546 585.2682411077546 -2.07457289475159 0.0 -2.07457289475159 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [{I|L}P]A 2.6997 - 424 + 1 1.774 79074.2 1.0 3497 4493 7990 HBL1_DMSO_200M_050219_2,7992 HBL1_DMSO_200M_050219_2,7992,LPPESTQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7993 43.303 800.0 178120.0 25 0 12022.0 2741 ATIGDVKGDEV 11 165 552.2815014091825 1102.548449885165 2 551.7740966677666 MULTI CID FTMS 0 0 0 7990 158820.109375 0.9123399464937002 -3 0.0853309631347656 3 Unmodified _ATIGDVKGDEV_ ENSG00000102098|ENST00000251900|SCML2 23.80106514851385 0.5333463718001408 4 [TA]{I|L}[{M(Oxidation (M))|F}V]RYAY 9 7 + 50.933 0.0 0.0 4.6196 4.6196 50.969 0.0 0.0 0.0 8.020884704825022 9.176127934005436 8.020884704825022 0.0 0 0.75 1.154901959985743 0.0 0.0 [TA]{I|L}[{M(Oxidation (M))|F}V]RYAY;[TA]{I|L}[{M(Oxidation (M))|F}V]RAYY;[TA]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L}YY;[TA]{I|L}MY[TA]VAY;[TA]{I|L}[{M(Oxidation (M))|F}V][VG]AYY;[TA]{I|L}[{M(Oxidation (M))|F}V][VG]YAY;[TA]{I|L}[{M(Oxidation (M))|F}V][YG]VAY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SAR[{M(Oxidation (M))|F}V]{I|L}[PG];[R{M(Oxidation (M))|F}]VERAYY;[R{M(Oxidation (M))|F}]VERYAY 4.6196;4.6196;4.0271;3.9314;3.7844;3.7844;3.5114;3.0117;2.9787;2.9787 -;-;-;-;-;-;-;-;-;- 2450 + 1 1.774 108400.6 0.8100000023841858 3498 4493 7990 HBL1_DMSO_200M_050219_2,7993 HBL1_DMSO_200M_050219_2,7993,ATIGDVKGDEV False True KYTISQEAY 43.30261 551.774096667767 1041115.0 7990.0 ENSG00000105254|ENST00000221855|TBCB;;ENST00000392178.8_1_19:36606435-36612715:+|nuORF;;nc|ENSG00000105254|Q99426-2|TBCB;;ENST00000589308.1_1_19:36606815-36612715:+|nuORF 4.924933433532715 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7994 43.309 369.0 205000.0 25 0 9810.2 + -1 LMMQGCRL 8 116 512.7397845160962 0 512.7391845583916 PEAK CID FTMS 0 0 0 7990 130705.9140625 1.0 0 0.0 4 Carbamidomethyl (C),Oxidation (M) _LMM(Oxidation (M))QGC(Carbamidomethyl (C))RL_ REV__ENSG00000101844|ENST00000372232|ATG4A;REV__nc|ENSG00000101844|Q8WYN0-2|ATG4A;REV__nc|ENSG00000101844|Q8WYN0-3|ATG4A;REV__nc|ENSG00000101844|Q8WYN0-5|ATG4A 11.114462752807354 0.5290325060821968 4 P{M(Oxidation (M))|F}G 3 -1 16.44 0.0 0.0 1.6063 0.0 0.0 99.0698048122318 620.2291964166624 719.2990012288942 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 P{M(Oxidation (M))|F}G 1.6063 - 202 + 1 1.774 63784.2 1.0 3499 4493 7990 HBL1_DMSO_200M_050219_2,7994 HBL1_DMSO_200M_050219_2,7994,LMMQGCRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7995 43.323 800.0 57615.0 25 0 5162.0 + 9022 FDMYWDIGRHY 11 80 751.8300016035353 1501.6454502738704 2 752.3325683474541 MULTI CID FTMS 0 0 0 7990 85329.421875 1.0 0 0.0 5 Unmodified _FDMYWDIGRHY_ REV__ENSG00000164100|ENST00000296499|NDST3 3.2813086475875832 0.8596665074481906 4 DQQAE 5 -1 24.949 0.0 0.0 1.6614 0.0 0.0 399.1799866639927 528.221949474347 927.4019361383396 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DQQAE 1.6614 - 195 + 1 1.774 36977.3 0.5699999928474426 3500 4493 7990 HBL1_DMSO_200M_050219_2,7995 HBL1_DMSO_200M_050219_2,7995,FDMYWDIGRHY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7997 43.328 34.0 1513400.0 25 0 408970.0 + 45951 YYYDTHTNTY 10 52 670.7744652680572 1339.5343776029142 2 670.7756225466728 MULTI CID FTMS 0 0 0 7996 1560948.5 0.7706568523578138 1 -0.0325584411621093 1 Unmodified _YYYDTHTNTY_ ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2 57.72198328787511 0.0425618229276495 4 YYYQNTYYY 9 5 + 69.83 0.0 0.0 5.213 5.213 82.393 0.0 0.0 0.0 15.145228064085998 16.478174818886373 15.145228064085998 9.208187539523747 0 0.7742275032520141 2.0 0.7742275032520141 0.3252574989159953 YYYQNTYYY;YYYQGGTYYY;[HT]{[YD]|[{M(Oxidation (M))|F}M]}TNTYYY;[HT]T{[YD]|[{M(Oxidation (M))|F}M]}NTYYY;[YT][HD]TNTYYY;[HT]{[YD]|[{M(Oxidation (M))|F}M]}TGGTYYY;[YT][HS]ENTYYY;[HT]T{[YD]|[{M(Oxidation (M))|F}M]}GGTYYY;[YT]EE{M(Oxidation (M))|F}YYYY;[HT]{[YD]|[{M(Oxidation (M))|F}M]}[C(Carbamidomethyl (C))R]YYY 5.213;4.5256;4.0823;3.7262;3.4048;3.1554;3.0487;2.7992;2.6744;2.6444 -;-;-;-;-;-;-;-;-;- 423 1 1.774 43853.6 1.0 3501 4494 7996 HBL1_DMSO_200M_050219_2,7997 HBL1_DMSO_200M_050219_2,7997,YYYDTHTNTY True True YYYDTHTNTY 43.327557 670.775622546673 41234409.0 7996.0 ENSG00000064651|ENST00000262461|SLC12A2;;nc|ENSG00000064651|P55011-3|SLC12A2 7.5651961962382 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 7998 43.342 800.0 137430.0 25 0 12286.0 + 19097 LDSDSNSSGLV 11 149 547.2539886751767 1092.4934244171534 2 547.2558471560478 MULTI CID FTMS 0 0 0 7996 108004.59375 0.7945011183116099 -2 0.0639190673828125 2 Unmodified _LDSDSNSSGLV_ REV__ENSG00000128881|ENST00000267890|TTBK2;REV__nc|ENSG00000128881|Q6IQ55-2|TTBK2 18.373094154950223 0.6529654022026722 4 {I|L}P 2 -1 37.58 0.0 0.0 3.4398 0.0 0.0 0.0 879.3345559076578 879.3345559076578 14.630517524737993 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 {I|L}P 3.4398 - 345 + 1 1.774 87130.7 0.699999988079071 3502 4494 7996 HBL1_DMSO_200M_050219_2,7998 HBL1_DMSO_200M_050219_2,7998,LDSDSNSSGLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 7999 43.356 800.0 178020.0 25 0 11297.0 + 17235 KLLNTVEET 9 169 523.7893351227124 1045.5641173122249 2 523.7905761599541 MULTI CID FTMS 0 0 0 7996 83437.109375 0.7862475819828904 -3 0.1110458374023437 3 Unmodified _KLLNTVEET_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 51.629811660486645 0.0367964933207742 4 {[SA]|[TG]}G{I|L}[K{I|L}]VEET 10 5 + 51.634 0.0 0.0 4.9384 4.9384 76.248 0.0 0.0 0.0 4.960017938758348 15.026975159433526 4.960017938758348 4.960017938758348 0 0.0 1.154901959985743 0.7856668758921829 0.7614393726401688 {[SA]|[TG]}G{I|L}[K{I|L}]VEET;{[QS]|[NT]}{I|L}[K{I|L}]VEET;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KTVEET;[K{I|L}]{I|L}NTVEET;{[TV]|[{I|L}S]}RRREET;{[TV]|[{I|L}S]}Q[K{I|L}]VEET;{[QV]|[N{I|L}]|[RA]|[KV]}T[K{I|L}]VEET;{[SA]|[TG]}AV[K{I|L}]VEET;[{I|L}V]QKTVEET;[Q{I|L}]VKTVEET 4.9384;4.464;3.9114;3.8323;3.6883;3.6844;3.5895;3.588;3.5145;3.0974 -;-;-;+;-;-;-;-;-;- + 1101 1 1.774 113144.3 0.6399999856948853 3503 4494 7996 HBL1_DMSO_200M_050219_2,7999 HBL1_DMSO_200M_050219_2,7999,KLLNTVEET True True KLLNTVEET 43.35563 523.790576159954 629588.75 7996.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 4.493141492207845 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8001 43.36 5.0 9566000.0 25 0 972830.0 + 24987 MPPPPPQGV 9 75 460.23852327962805 918.462493626056 2 460.2392455935478 MULTI CID FTMS 0 0 0 8000 10969011.0 0.5918942247391357 37 -2.70892333984375 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 4 {NN|[MP]|[D{I|L}]|[EV]}PPP 5 4 23.715 0.0 0.0 2.582 0.0 0.0 0.0 396.1877961455453 396.1877961455453 1.496046352182585 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.2887254899964357 0.0 + {NN|[MP]|[D{I|L}]|[EV]}PPP 2.582 + + 113 1 1.777 42202.0 1.0 3504 4495 8000 HBL1_DMSO_200M_050219_2,8001 HBL1_DMSO_200M_050219_2,8001,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8002 43.361 22.0 2954700.0 25 0 339710.0 + 43227 WAPIRDGASI 10 80 362.5294940101128 1084.5666526305386 3 362.5293762087822 MULTI CID FTMS 0 0 0 8000 2258433.0 0.7459816622127196 8 -0.3638687133789062 2 Unmodified _WAPIRDGASI_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 22.736283301280096 0.4578556481593033 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 5 -1 44.495 0.0 0.0 4.1025 0.0 0.0 0.0 485.24628626041255 485.24628626041255 29.71848749616356 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.7059771852360797 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 4.1025 - 70 + 1 1.777 61107.5 1.0 3505 4495 8000 HBL1_DMSO_200M_050219_2,8002 HBL1_DMSO_200M_050219_2,8002,WAPIRDGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8003 43.363 57.0 1143300.0 25 0 161350.0 43211 WALATPQKNG 10 73 543.2904189954048 1084.5662850576095 2 543.2908203005791 MULTI CID FTMS 0 0 0 8000 949268.375 0.7147641686264887 7 -0.3205032348632812 3 Unmodified _WALATPQKNG_ ENSG00000166173|ENST00000299213|LARP6 17.11289562659939 0.5604042439455784 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 5 6 41.22 0.0 0.0 3.8006 0.0 0.0 0.0 470.2346285455688 470.2346285455688 38.74557228525223 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.4247425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 3.8006 - 33 + 1 1.777 56484.4 1.0 3506 4495 8000 HBL1_DMSO_200M_050219_2,8003 HBL1_DMSO_200M_050219_2,8003,WALATPQKNG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8004 43.364 61.0 800240.0 25 0 129410.0 + 29936 QSLGQVYPG 9 76 474.7416097497134 947.4686665662268 2 474.7419921755791 MULTI CID FTMS 0 0 0 8000 791676.0625 1.0 0 0.0 4 Unmodified _QSLGQVYPG_ REV__ENSG00000159433|ENST00000290607|STARD9;REV__ENST00000564158.5_1_15:42867889-42955097:+|nuORF;REV__nc|ENSG00000159433|Q9P2P6-2|STARD9;REV__nc|ENSG00000159433|Q9P2P6-3|STARD9 19.256988751693697 0.3154191944385105 4 {[QS]|[NT]}{I|L}VQ 5 -1 24.208 0.0 0.0 2.555 0.0 0.0 0.0 389.1500643365844 389.1500643365844 8.266062568876718 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {[QS]|[NT]}{I|L}VQ 2.555 - 136 + 1 1.777 41988.0 1.0 3507 4495 8000 HBL1_DMSO_200M_050219_2,8004 HBL1_DMSO_200M_050219_2,8004,QSLGQVYPG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8005 43.367 114.0 419460.0 25 0 34896.0 + + -1 TIDPSNPMV 9 95 495.2334217574287 988.4522905816574 2 495.2334472537041 MULTI CID FTMS 0 0 0 8000 345474.125 0.6421616258779848 4 -0.1790924072265625 5 Oxidation (M) _EVPSSM(Oxidation (M))QPV_ ENSG00000198730|ENST00000361367|CTR9 16.942295170755138 0.3780752226737986 4 [{I|L}T]{M(Oxidation (M))|F} 3 -1 28.244 0.0 0.0 2.8574 0.0 0.0 0.0 624.2616222069105 624.2616222069105 13.640078085766092 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}T]{M(Oxidation (M))|F} 2.8574 - 130 1 1.777 42724.3 1.0 3508 4495 8000 HBL1_DMSO_200M_050219_2,8005 HBL1_DMSO_200M_050219_2,8005,EVPSSMQPV False False TIDPSNPMV 43.366626 495.233447253704 13039439.0 8000.0 ENSG00000198730|ENST00000361367|CTR9 5.508351643880208 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8006 43.371 251.0 368300.0 25 0 22418.0 11809 GLMTIAIS 8 115 403.2288439868252 804.4431350404504 2 403.2326537966728 MULTI CID FTMS 0 0 0 8000 144437.109375 0.3967434587367661 -6 0.1744804382324218 6 Unmodified _GLMTIAIS_ ENSG00000142408|ENST00000270458|CACNG8 9.347437153973935 0.7675937258251505 4 [WY]V{I|L}PK 6 7 + 17.229 0.0 0.0 2.1417 2.1417 60.343 0.0 0.0 0.0 6.119412640251344 0.2802872360024366 0.2802872360024366 0.2802872360024366 0 0.2614393726401688 0.0 0.0 0.0 [WY]V{I|L}PK;[WY]V{I|L}KP;[WY]VK{I|L}P 2.1417;2.1068;1.0191 -;-;- 72 + 1 1.777 78724.0 1.0 3509 4495 8000 HBL1_DMSO_200M_050219_2,8006 HBL1_DMSO_200M_050219_2,8006,GLMTIAIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8008 43.376 10.0 5162000.0 25 0 736610.0 + 34922 SQIPAQPSV 9 57 463.7503539934432 925.4861550536864 2 463.7507812380791 MULTI CID FTMS 0 0 0 8007 5882389.0 0.8231651798686591 3 -0.1634407043457031 1 Unmodified _SQIPAQPSV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 40.23920728925047 0.0741434193262949 4 [PA]Q{I|L}ST 6 5 28.852 0.0 0.0 3.1175 0.0 0.0 0.0 325.1506434995553 325.1506434995553 5.435684192258002 0.0 0.0 0.0 0 0.7302046884880937 0.744727494896694 0.0 0.0 [PA]Q{I|L}ST 3.1175 - 317 1 1.777 48660.5 1.0 3510 4496 8007 HBL1_DMSO_200M_050219_2,8008 HBL1_DMSO_200M_050219_2,8008,SQIPAQPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8009 43.382 337.0 261750.0 25 0 23235.0 + 5672 DPFSVKRNV 9 113 531.2902580369018 1060.5659631406036 2 531.2908813357353 MULTI CID FTMS 0 0 0 8007 170147.015625 0.3380431078334085 5 -0.2707633972167969 2 Unmodified _DPFSVKRNV_ ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3-2|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4 51.629811660486645 0.0367964933207742 4 DP{M(Oxidation (M))|F}SVK 6 3 74.558 0.0 0.0 7.03 0.0 0.0 0.0 384.19980798892817 384.19980798892817 38.359790849763655 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.0 0.4247425010840047 + DP{M(Oxidation (M))|F}SVK 7.03 + + 262 + 1 1.777 71891.9 1.0 3511 4496 8007 HBL1_DMSO_200M_050219_2,8009 HBL1_DMSO_200M_050219_2,8009,DPFSVKRNV True True DPFSVKRNV 43.381876 531.290881335735 6359270.5 8007.0 nc|ENSG00000134744|Q5TAX3|TUT4;;ENSG00000134744|ENST00000257177|TUT4;;nc|ENSG00000134744|Q5TAX3-2|TUT4 6.538464387257894 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8011 43.386 38.0 1132700.0 25 0 73088.0 + 36609 TAPPNAYTV 9 75 467.2365671583473 932.4585813834948 2 467.2376281619072 MULTI CID FTMS 0 0 0 8010 1203734.375 0.7935605066426327 -3 0.0588531494140625 1 Unmodified _TAPPNAYTV_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 19.256988751693697 0.3154191944385105 4 AYTV[TA] 6 6 30.406 0.0 0.0 3.2608 0.0 0.0 308.14814955879064 0.0 308.14814955879064 0.0 12.422750325201406 0.0 0.0 0 0.0 0.0 0.5 0.0 AYTV[TA] 3.2608 - 136 1 1.777 43566.3 1.0 3512 4497 8010 HBL1_DMSO_200M_050219_2,8011 HBL1_DMSO_200M_050219_2,8011,TAPPNAYTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8012 43.391 266.0 413320.0 25 0 62623.0 + 21236 LPDKGQKLI 9 98 337.8781051567177 1010.6124860703532 3 337.8781005740166 MULTI CID FTMS 0 0 0 8010 234553.0 0.0507310926359964 -7 0.1927490234375 2 Unmodified _LPDKGQKLI_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 38.17557092003332 0.0854718145212029 4 KDP{I|L}{I|L} 5 6 44.469 0.0 0.0 4.4002 0.0 0.0 426.2595997541032 0.0 426.2595997541032 0.0 35.618641976483644 0.0 0.0 0 0.6549471895720984 0.0 0.7742275032520141 0.0 KDP{I|L}{I|L} 4.4002 - 166 1 1.777 96211.4 1.0 3513 4497 8010 HBL1_DMSO_200M_050219_2,8012 HBL1_DMSO_200M_050219_2,8012,LPDKGQKLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8013 43.4 463.0 301240.0 25 0 55052.0 + 12929 HAAELIKTV 9 146 491.2898013899257 980.5650498466514 2 491.2900573611259 MULTI CID FTMS 0 0 0 8010 212282.359375 0.8850406822790258 -1 0.0106430053710937 3 Unmodified _HAAELIKTV_ ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 78.7280429016045 0.0178249292250809 4 [HA]AE{I|L}{I|L}KTV 9 0 + 79.516 0.0 0.0 8.1092 8.1092 94.234 0.0 0.0 0.0 12.57278487800906 16.47817481888638 12.57278487800906 12.57278487800906 0 1.1643943297944483 1.5228787452803376 0.7059771852360797 0.0 + + [HA]AE{I|L}{I|L}KTV;[VG]DH{I|L}{I|L}KTV;[VG]D{I|L}H{I|L}KTV;{NN|[MP]|[D{I|L}]|[EV]}RH{I|L}KTV;[{I|L}A]EAH{I|L}KTV;{[CP]|[EA]}{I|L}AH{I|L}KTV;{[CP]|[EA]}AH{I|L}{I|L}KTV;{[TV]|[{I|L}S]}[PS]H{I|L}KTV;[PS]SH{I|L}{I|L}KTV;{[QN]|[E{I|L}]|[KN]}AAH{I|L}KTV 8.1092;6.827;6.3404;6.0229;5.7738;5.4556;5.3873;5.3679;5.3673;5.1771 +;-;-;-;-;-;-;-;-;- + 625 1 1.777 109514.1 1.0 3514 4497 8010 HBL1_DMSO_200M_050219_2,8013 HBL1_DMSO_200M_050219_2,8013,HAAELIKTV True True HAAELIKTV 43.399526 491.290057361126 1761014.125 8010.0 ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 6.782375335693359 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8014 43.409 520.0 437490.0 25 0 41916.0 + 13936 HYIDRVRAL 9 146 381.55242642977817 1141.6354498895346 3 381.5523864626884 MULTI CID FTMS 0 0 0 8010 187056.6875 0.1615511181325686 -3 0.0588531494140625 4 Unmodified _HYIDRVRAL_ ENSG00000176619|ENST00000325327|LMNB2 71.70789743142352 0.0204387454931768 4 HY{I|L}DRVRA{I|L} 9 0 + 86.176 0.0 0.0 7.5485 7.5485 94.992 0.0 0.0 0.0 58.7803916285369 6.726307269461756 6.726307269461756 24.489700043360195 0 1.6947116695113236 2.0 0.0 1.5387254899964358 + + HY{I|L}DRVRA{I|L};H{I|L}YDRVRA{I|L};{I|L}HYDRVRA{I|L};HY[KG][QA]VRA{I|L};{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}GDRVRA{I|L};H{I|L}A{[YC]|[HE]}PVRA{I|L};[PG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DRVRA{I|L};{I|L}AH{[YC]|[HE]}PVRA{I|L};{I|L}HA{[YC]|[HE]}PVRA{I|L};H{I|L}[RH]MKHA{I|L} 7.5485;5.4033;4.6927;3.9409;3.8861;2.6448;2.0308;1.9766;1.9341;1.501 +;-;-;-;-;-;-;-;-;- + 609 + 1 1.777 184130.6 1.0 3515 4497 8010 HBL1_DMSO_200M_050219_2,8014 HBL1_DMSO_200M_050219_2,8014,HYIDRVRAL True True HYIDRVRAL 43.408668 381.552386462688 16651660.0 8010.0 ENSG00000176619|ENST00000325327|LMNB2 6.41219965616862 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8015 43.414 287.0 246870.0 25 0 13022.0 + 23733 LTVTDGEHVVL 11 104 394.8837838428192 1181.6295221286578 3 394.8842651247978 MULTI CID FTMS 0 0 0 8010 160198.265625 0.7491824909140691 6 -0.3375740051269531 5 Unmodified _LTVTDGEHVVL_ REV__nc|ENSG00000211815|A0A075B6V5|TRAV36DV7 13.51866281300042 0.753942941462391 4 HVER{I|L} 5 -1 14.843 0.0 0.0 1.2562 0.0 0.0 529.2636812151288 0.0 529.2636812151288 0.0 3.873949984654255 0.0 0.0 0 0.5 0.0 0.0 0.0 HVER{I|L} 1.2562 - 113 + 1 1.777 62678.5 1.0 3516 4497 8010 HBL1_DMSO_200M_050219_2,8015 HBL1_DMSO_200M_050219_2,8015,LTVTDGEHVVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8016 43.428 800.0 230860.0 25 0 10689.0 + 26205 NQIDHEVTV 9 188 527.7610707450333 1053.5075885568665 2 527.7623779177666 MULTI CID FTMS 0 0 0 8010 136286.4375 0.1066787921827504 -3 0.0588531494140625 6 Unmodified _NQIDHEVTV_ ENSG00000112159|ENST00000369393|MDN1 114.6490535036381 0.0036024293994099 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SEQTRTV 9 7 + 63.84 0.0 0.0 6.0597 6.0597 75.089 0.0 0.0 0.0 1.5625631093818129 1.5625631093818129 1.5625631093818129 1.5625631093818129 0 1.0941876774005248 1.6989700043360187 0.3054621874040891 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SEQTRTV;GGQ{I|L}DHEVTV;{[QN]|[E{I|L}]|[KN]}{I|L}DHEVTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SE[AG]TRTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}VDVEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VTVE{M(Oxidation (M))|F}TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV]{NN|[MP]|[D{I|L}]|[EV]}HTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}V{I|L}DVEV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RH][NG]HTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SEQTRS{I|L} 6.0597;5.9114;5.5107;5.1857;5.131;4.6681;4.6181;4.6146;4.5605;4.3882 -;-;+;-;-;-;-;-;-;- + 4910 + 1 1.777 146727.4 0.6899999976158142 3517 4497 8010 HBL1_DMSO_200M_050219_2,8016 HBL1_DMSO_200M_050219_2,8016,NQIDHEVTV True True NQIDHEVTV 43.42778 527.762377917767 7800035.0 8010.0 ENSG00000112159|ENST00000369393|MDN1 6.677681128184001 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8017 43.442 800.0 106930.0 25 0 56525.0 -1 0 39 953.9409569199004 1905.8673609066009 2 955.4474975466728 MULTI CID FTMS 0 0 0 8010 103907.8125 0.7968226306685589 2 -0.1527976989746093 7 4 V 1 -1 6.9897 0.0 0.0 0.36675 0.0 0.0 951.4243726901587 852.3501632592968 1803.774535949456 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.36675 - 3 + 1 1.777 66648.9 0.5199999809265137 3518 4497 8010 HBL1_DMSO_200M_050219_2,8017 HBL1_DMSO_200M_050219_2,8017, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8019 43.446 12.0 4413100.0 25 0 301680.0 + 4242 DAPMTPKQI 9 78 500.760018192245 999.5054834512902 2 500.7604553103447 MULTI CID FTMS 0 0 0 8018 4264987.5 0.418769808778246 7 -0.3415107727050781 1 Unmodified _DAPMTPKQI_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1 47.74868867922204 0.0453060283459952 4 {[DA]|[EG]}PMTPKQ{I|L} 9 0 + 73.236 0.0 0.0 7.3272 7.3272 92.425 0.0 0.0 0.0 55.35544349108783 15.655980316589364 15.655980316589364 12.460762528683702 0 0.3054621874040891 2.0 0.3807196863200844 0.75 + + {[DA]|[EG]}PMTPKQ{I|L};{[DA]|[EG]}PMTPK[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}T[KP]{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]} 7.3272;6.0805;0.25003 +;-;- + 214 + 1 1.777 47117.3 1.0 3519 4498 8018 HBL1_DMSO_200M_050219_2,8019 HBL1_DMSO_200M_050219_2,8019,DAPMTPKQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8020 43.447 25.0 2211300.0 25 0 248660.0 + 41182 VPDQPHPEI 9 70 516.2609455430522 1030.5073381529044 2 516.2617675662041 MULTI CID FTMS 0 0 0 8018 2459492.75 0.598138578501664 -4 0.1186180114746093 2 Unmodified _VPDQPHPEI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 36.506200033944 0.094635877243972 4 VPDQ 4 5 50.394 0.0 0.0 4.8902 0.0 0.0 0.0 588.2806439499274 588.2806439499274 14.75895023531386 0.0 0.0 0.0 0 0.75 1.5228787452803376 0.0 0.3252574989159953 + VPDQ 4.8902 + + 205 + 1 1.777 53681.8 1.0 3520 4498 8018 HBL1_DMSO_200M_050219_2,8020 HBL1_DMSO_200M_050219_2,8020,VPDQPHPEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8021 43.45 108.0 674220.0 25 0 145160.0 42248 VSMEQKEN 8 66 482.7240643383242 963.4335757434484 2 482.7242614626884 MULTI CID FTMS 0 0 0 8018 611035.5 0.5171685103301794 3 -0.2003555297851562 3 Unmodified _VSMEQKEN_ ENSG00000264522|ENST00000581312|OTUD7B;nc|ENSG00000264522|Q6GQQ9-2|OTUD7B 7.289230182591677 0.7800870086367542 4 VS 2 6 20.969 0.0 0.0 2.1765 0.0 0.0 0.0 774.309400512235 774.309400512235 4.542425094393252 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + VS 2.1765 + + 32 + 1 1.777 61822.1 1.0 3521 4498 8018 HBL1_DMSO_200M_050219_2,8021 HBL1_DMSO_200M_050219_2,8021,VSMEQKEN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8022 43.452 139.0 390360.0 25 0 34959.0 + + 33377 DAPMTPKQI 9 97 508.76099627698153 1015.5074396207632 2 508.7578613162041 MULTI CID FTMS 0 0 0 8018 384395.5625 0.1993879991184604 22 -1.6606483459472656 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SGLDRWQL_ ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1;ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant 48.345845343767074 0.1470278396477103 4 {[DA]|[EG]}P{M(Oxidation (M))|F}TPKQ{I|L} 9 -1 + 53.202 0.0 0.0 5.239 5.239 83.484 0.0 0.0 0.0 28.29435119098428 14.4812969097282 14.4812969097282 9.451687839877891 0 0.0 2.0 0.0 0.6861818737241735 {[DA]|[EG]}P{M(Oxidation (M))|F}TPKQ{I|L};{[DA]|[EG]}{I|L}[EC]PKQ{I|L};{[DA]|[EG]}P{M(Oxidation (M))|F}TPK[AG]{I|L};{[DA]|[EG]}{I|L}[EC]PK[AG]{I|L};{[DA]|[EG]}[HK]T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QG]|[NA]} 5.239;4.3083;4.0314;3.1007;1.4839 -;-;-;-;- 156 + 1 1.777 47667.2 1.0 3522 4498 8018 HBL1_DMSO_200M_050219_2,8022 HBL1_DMSO_200M_050219_2,8022,SGLDRWQL False False DAPMTPKQI 43.452434 508.757861316204 23165707.5 8018.0 ENSG00000171456|ENST00000375687|ASXL1;;nc|ENSG00000171456|Q8IXJ9-2|ASXL1;;ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant 7.213500022888184 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8023 43.455 115.0 414080.0 25 0 31460.0 + 25535 NERGELRPA 9 86 521.2765461675672 1040.5385394019345 2 521.2771484255791 MULTI CID FTMS 0 0 0 8018 321087.96875 0.9023438265002648 -2 0.0704078674316406 5 Unmodified _NERGELRPA_ REV__ENST00000453535.1_1_19:42734412-42734915:-|nuORF 6.723162845929126 0.6799819581413107 4 PR{[QG]|[NA]} 4 -1 21.198 0.0 0.0 2.0372 0.0 0.0 584.3174629899223 0.0 584.3174629899223 0.0 10.819284013193348 0.0 0.0 0 0.5 0.0 0.0 0.0 PR{[QG]|[NA]} 2.0372 - 44 1 1.777 45938.2 1.0 3523 4498 8018 HBL1_DMSO_200M_050219_2,8023 HBL1_DMSO_200M_050219_2,8023,NERGELRPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8024 43.459 199.0 446580.0 25 0 76873.0 -1 YPLVGTMSTMP 11 98 410.1912856872805 1227.5520276620416 3 410.1915771365166 MULTI CID FTMS 0 0 0 8018 319198.71875 0.6202048899378421 -1 0.0597648620605468 6 2 Oxidation (M) _YPLVGTM(Oxidation (M))STM(Oxidation (M))P_ ENSG00000100714|ENST00000652337|MTHFD1;ENSG00000120254|ENST00000367321|MTHFD1L 13.51866281300042 0.753942941462391 4 YP{I|L}V 4 -1 45.266 0.0 0.0 3.6875 0.0 0.0 0.0 752.2580050104124 752.2580050104124 18.35792101923193 0.0 0.0 0.0 0 0.2614393726401688 1.2218487496163564 0.0 0.0 YP{I|L}V 3.6875 + + 156 + 1 1.777 76844.1 1.0 3524 4498 8018 HBL1_DMSO_200M_050219_2,8024 HBL1_DMSO_200M_050219_2,8024,YPLVGTMSTMP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8025 43.463 208.0 473150.0 25 0 43553.0 + 21241 LPDKGQKLI 9 112 506.31376148077777 1010.6129700283556 2 506.3154479861259 MULTI CID FTMS 0 0 0 8018 255790.140625 0.131897193892481 -8 0.2525138854980469 7 Unmodified _LPDKGQKLI_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 51.629811660486645 0.0367964933207742 4 [{I|L}P][WE]K{I|L}{I|L}{I|L} 8 5 + 49.804 0.0 0.0 4.9281 4.9281 73.103 0.0 0.0 0.0 5.575287319555642 14.904630595263413 5.575287319555642 3.0102999566398125 0 0.6989700043360187 2.0 0.7742275032520141 0.0 [{I|L}P][WE]K{I|L}{I|L}{I|L};[{I|L}P][WE]{I|L}K{I|L}{I|L};[DP]K{I|L}{[QG]|[NA]}K{I|L}{I|L};[DP]K{[QG]|[NA]}K{I|L}{I|L}{I|L};[DP]AAV[KG]K{I|L}{I|L};[DP]K{[QG]|[NA]}{I|L}K{I|L}{I|L};[DP]{I|L}Q[KG]K{I|L}{I|L};{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}[HT]K{I|L}{I|L};[PS][VG]{I|L}{[QG]|[NA]}K{I|L}{I|L};[KT][HS]{[TV]|[{I|L}S]}{I|L}{I|L}{I|L} 4.9281;4.6302;4.3764;3.7819;3.6913;3.484;3.3599;3.118;2.3799;1.9596 -;-;-;-;-;-;-;-;-;- 426 1 1.777 82543.0 1.0 3525 4498 8018 HBL1_DMSO_200M_050219_2,8025 HBL1_DMSO_200M_050219_2,8025,LPDKGQKLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8026 43.469 359.0 455530.0 25 0 59013.0 + 41840 VPYGSFKHV 9 162 345.1876136874332 1032.5410116624996 3 345.1871215701103 MULTI CID FTMS 0 0 0 8018 230033.796875 0.7782764112011354 -1 0.0597648620605468 8 Unmodified _VPYGSFKHV_ ENSG00000163935|ENST00000394752|SFMBT1;nc|ENSG00000163935|Q9UHJ3-2|SFMBT1 26.268140514670165 0.1969607489560049 4 VPYGS{M(Oxidation (M))|F}KHV 9 0 + 51.592 0.0 0.0 4.9966 4.9966 68.302 0.0 0.0 0.0 16.418823306512756 0.3778856088939974 0.3778856088939974 0.3778856088939974 0 0.0731074559755159 0.4436974992327127 0.3807196863200844 0.0 + + VPYGS{M(Oxidation (M))|F}KHV;VPYGS{M(Oxidation (M))|F}KVH;VPYGS[{I|L}A]MPV;VPYGS[R{I|L}]{[QN]|[E{I|L}]|[KN]};VPY[YQ]KHV;VPY[YQ]KVH;VPYG{I|L}V[CS]PV;VPV[QA]{[{M(Oxidation (M))|F}H]|[RQ]}HV;VPV[QA]{[{M(Oxidation (M))|F}H]|[RQ]}VH;VPYG{I|L}V[PS]CV 4.9966;4.96;3.7689;3.4951;3.2297;3.1931;3.066;2.9653;2.9287;2.7745 +;-;-;-;-;-;-;-;-;- + 465 + 1 1.777 142662.0 1.0 3526 4498 8018 HBL1_DMSO_200M_050219_2,8026 HBL1_DMSO_200M_050219_2,8026,VPYGSFKHV False True VPYGSFKHV 43.469073 345.18712157011 5036807.0 8018.0 nc|ENSG00000163935|Q9UHJ3-2|SFMBT1;;ENSG00000163935|ENST00000394752|SFMBT1 7.146110375722249 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8027 43.476 375.0 281250.0 25 0 32715.0 + 13820 HTLVPSTFGH 10 109 548.2824597880839 1094.5503666429677 2 548.2824584841728 MULTI CID FTMS 0 0 0 8018 187585.40625 0.1589342832711406 -6 0.1825370788574218 9 Unmodified _HTLVPSTFGH_ REV__ENST00000599425.5_1_19:50060962-50063306:-|nuORF;REV__ENST00000600019.5_1_19:50060962-50063200:-|nuORF 19.62595529434964 0.5182375435722777 4 EHPPEH[HK] 8 -1 58.203 0.0 0.0 5.3175 0.0 0.0 85.0898686139664 0.0 85.0898686139664 0.0 40.94045721766862 0.0 0.0 0 2.638210492164445 0.0 0.7742275032520141 0.0 EHPPEH[HK] 5.3175 - 934 1 1.777 86027.7 1.0 3527 4498 8018 HBL1_DMSO_200M_050219_2,8027 HBL1_DMSO_200M_050219_2,8027,HTLVPSTFGH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8028 43.484 457.0 277390.0 25 0 15754.0 + 29681 QPDFELHAI 9 164 535.2671645504306 1068.5197761676611 2 535.2675048708916 MULTI CID FTMS 0 0 0 8018 161205.78125 0.3959949476836232 -1 0.0597648620605468 10 Unmodified _QPDFELHAI_ ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4 36.12702656103203 0.0967173616627612 4 QDTRGTA{I|L} 8 5 65.602 0.0 0.0 6.1395 0.0 0.0 208.0852833478532 0.0 208.0852833478532 0.0 47.18555973876606 0.0 0.0 0 2.7302046884880937 0.0 0.6989700043360187 0.3252574989159953 QDTRGTA{I|L} 6.1395 - 1601 1 1.777 98278.6 1.0 3528 4498 8018 HBL1_DMSO_200M_050219_2,8028 HBL1_DMSO_200M_050219_2,8028,QPDFELHAI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8029 43.489 247.0 230960.0 25 0 24923.0 + 13876 HVMDETHVI 9 96 540.7606111438048 1079.5066693544095 2 540.7618896365166 MULTI CID FTMS 0 0 0 8018 164180.921875 1.0 0 0.0 11 Unmodified _HVMDETHVI_ ENSG00000075089|ENST00000188312|ACTR6 36.04419817259434 0.0971720506436186 4 [HV][HS][HD]HM 8 6 39.816 0.0 0.0 3.6883 0.0 0.0 0.0 96.09763943044746 96.09763943044746 31.232332902177248 0.0 0.0 0.0 0 0.9876954943324544 2.0 0.805462187404089 0.0 [HV][HS][HD]HM 3.6883 - 177 1 1.777 48364.0 1.0 3529 4498 8018 HBL1_DMSO_200M_050219_2,8029 HBL1_DMSO_200M_050219_2,8029,HVMDETHVI True True HVMDETHVI 43.48854 540.761889636517 993820.0 8018.0 ENSG00000075089|ENST00000188312|ACTR6 3.9877773920694985 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8030 43.492 178.0 311050.0 25 0 22474.0 -1 EAFKCSIC 8 105 479.21354572844695 956.412538523694 2 479.2137328982353 MULTI CID FTMS 0 0 0 8018 136070.671875 0.4734472292985562 -3 0.0860595703125 12 Carbamidomethyl (C) _EAFKCSIC(Carbamidomethyl (C))_ ENSG00000163602|ENST00000477973|RYBP;nc|ENSG00000163602|Q8N488|RYBP 9.347437153973935 0.7675937258251505 4 [TA]V 3 -1 17.051 0.0 0.0 1.7828 0.0 0.0 0.0 682.2363049634001 682.2363049634001 3.952424927286849 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.2614393726401688 0.0 [TA]V 1.7828 - 175 1 1.777 46598.9 1.0 3530 4498 8018 HBL1_DMSO_200M_050219_2,8030 HBL1_DMSO_200M_050219_2,8030,EAFKCSIC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8031 43.506 800.0 139180.0 25 0 6880.0 + 45553 YVDDTPAEQM 10 128 584.7447515311932 1167.4749501291865 2 584.7451049685478 MULTI CID FTMS 0 0 0 8018 127991.9609375 0.3645226638134331 -2 0.0704078674316406 13 Unmodified _YVDDTPAEQM_ ENSG00000136628|ENST00000366923|EPRS1 92.4914307365334 0.009155046393728 4 [YV]DDTPAEMQ 10 2 + 66.89 0.0 0.0 5.7294 5.7294 77.715 0.0 0.0 0.0 3.577504818670363 6.248482774355892 3.577504818670363 3.577504818670363 0 0.7856668758921829 2.0 1.6549471895720984 0.0 [YV]DDTPAEMQ;{[ES]|[DT]|[{I|L}C]}DYVPAEMQ;DDTYVPAEMQ;[YN]EAPTDD{I|L}M;{[ES]|[DT]|[{I|L}C]}DVYPAEMQ;[PA]{[{M(Oxidation (M))|F}D]|MM}YPAEMQ;DDTVYPAEMQ;[PA]Y{[{M(Oxidation (M))|F}D]|MM}PAEMQ;[YN]EAPTDD{M(Oxidation (M))|F}P;[YN]EAPV{[C(Carbamidomethyl (C))G]|[NC]}QM 5.7294;5.423;5.2148;5.0385;4.4835;4.3152;4.2753;4.262;4.1299;4.1132 -;-;-;-;-;-;-;-;-;- 2399 1 1.777 87409.1 0.6499999761581421 3531 4498 8018 HBL1_DMSO_200M_050219_2,8031 HBL1_DMSO_200M_050219_2,8031,YVDDTPAEQM True True YVDDTPAEQM 43.505823 584.745104968548 5757474.5 8018.0 ENSG00000136628|ENST00000366923|EPRS1 8.315781275431315 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8032 43.521 800.0 95697.0 25 0 4154.0 + 15124 INENRQFEQIS 11 116 689.3410125987381 1376.667472264276 2 689.3425170779228 MULTI CID FTMS 0 0 0 8018 109530.0859375 0.843656257330169 -1 0.0597648620605468 14 Unmodified _INENRQFEQIS_ REV__ENSG00000061987|ENST00000393630|MON2;REV__ENST00000547095.5_1_12:62864501-62986526:+|nuORF;REV__ENST00000551307.5_1_12:62954224-62986526:+|nuORF;REV__nc|ENSG00000061987|Q7Z3U7-2|MON2;REV__nc|ENSG00000061987|Q7Z3U7-3|MON2;REV__nc|ENSG00000061987|Q7Z3U7-5|MON2;REV__nc|ENSG00000061987|Q7Z3U7-6|MON2 33.4449034751529 0.3133739643825231 4 {[QV]|[N{I|L}]|[RA]|[KV]}E{M(Oxidation (M))|F}[WH]G{M(Oxidation (M))|F}{I|L}QS 11 -1 + 66.687 0.0 0.0 4.8441 4.8441 77.058 0.0 0.0 0.0 12.8701563386386 9.35728569561438 9.35728569561438 6.020599913279632 0 1.2856668758921828 0.6989700043360187 0.7742275032520141 0.5866968715561641 {[QV]|[N{I|L}]|[RA]|[KV]}E{M(Oxidation (M))|F}[WH]G{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}E[WQ]RG{M(Oxidation (M))|F}{I|L}QS;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}[WH]G{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}E[WQ][VG]G{M(Oxidation (M))|F}{I|L}QS;[Q{I|L}]D{M(Oxidation (M))|F}[WH]G{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}EHG[WH][RN]QS;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[WQ]RG{M(Oxidation (M))|F}{I|L}QS;{NN|[MP]|[D{I|L}]|[EV]}Q{M(Oxidation (M))|F}[WH]G{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}EHGEE[HV]VQS;{[QV]|[N{I|L}]|[RA]|[KV]}ES[{M(Oxidation (M))|F}T][EP]{I|L}{I|L}QS 4.8441;4.4067;3.9092;3.7437;3.6243;3.5885;3.4719;3.4459;3.4021;3.3651 -;-;-;-;-;-;-;-;-;- 1249 1 1.777 61358.0 0.5899999737739563 3532 4498 8018 HBL1_DMSO_200M_050219_2,8032 HBL1_DMSO_200M_050219_2,8032,INENRQFEQIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8033 43.535 800.0 178380.0 25 0 18223.0 + 32378 RYQEDVQQL 9 116 589.7935227194862 1177.5724925057723 2 589.7946044802666 MULTI CID FTMS 0 0 0 8018 99623.3359375 0.3439447027369414 -3 0.0860595703125 15 Unmodified _RYQEDVQQL_ ENSG00000126001|ENST00000397527|CEP250;nc|ENSG00000126001|Q9BV73-2|CEP250 66.45667989310934 0.0225072657982126 4 [AG][YR]EDVQQ{I|L} 10 3 + 74.116 0.0 0.0 6.2939 6.2939 84.463 0.0 0.0 0.0 7.507950837768433 16.53212513775344 7.507950837768433 7.507950837768433 0 0.3807196863200844 2.0 0.7059771852360797 0.805462187404089 [AG][YR]EDVQQ{I|L};[YR]QEDVQQ{I|L};[AG][YR]EDVQ[AG]{I|L};[AG][YR]EDV[AG]Q{I|L};[AG]V[WY]DVQQ{I|L};[YR][AG]EDVQQ{I|L};[YR]QEDV[AG]Q{I|L};[YR]QEDVQ[AG]{I|L};[AG]VD[WY]VQQ{I|L};[VP][HN]EDVQQ{I|L} 6.2939;5.6564;5.5157;5.5157;5.2156;4.8744;4.8744;4.8744;4.8539;4.8019 -;+;-;-;-;-;-;-;-;- + 853 1 1.777 110205.2 0.6200000047683716 3533 4498 8018 HBL1_DMSO_200M_050219_2,8033 HBL1_DMSO_200M_050219_2,8033,RYQEDVQQL True True RYQEDVQQL 43.534665 589.794604480267 1909950.625 8018.0 nc|ENSG00000126001|Q9BV73-2|CEP250;;ENSG00000126001|ENST00000397527|CEP250 7.805489381154378 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8035 43.539 35.0 1643900.0 25 0 132300.0 + 6458 EAFKNRMEV 9 87 375.190208200284 1122.548795201052 3 375.1902038455009 MULTI CID FTMS 0 0 0 8034 1565688.375 0.7630479109507655 1 -0.0786170959472656 1 Unmodified _EAFKNRMEV_ ENSG00000123562|ENST00000441076|MORF4L2 12.240655878213236 0.5053430591993562 4 YTM 3 8 26.198 0.0 0.0 2.3338 0.0 0.0 0.0 724.3539153650029 724.3539153650029 11.593793813122062 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YTM 2.3338 - 181 + 1 1.779 54386.2 1.0 3534 4499 8034 HBL1_DMSO_200M_050219_2,8035 HBL1_DMSO_200M_050219_2,8035,EAFKNRMEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8036 43.541 52.0 1180200.0 25 0 154510.0 + 8980 GQISDRPSL 9 92 486.7427199742478 971.4708870152956 2 486.7427856326103 MULTI CID FTMS 0 0 0 8034 196223.765625 0.0551587038473385 8 -0.365692138671875 2 Unmodified _FASHVSPEV_ nc|ENSG00000239961|P59901-2|LILRA4;ENSG00000239961|ENST00000291759|LILRA4 28.486842064014134 0.1687311288560894 4 {I|L}SDR[TP]V 7 6 32.523 0.0 0.0 3.3478 0.0 0.0 185.04633186787183 0.0 185.04633186787183 0.0 11.915564956887028 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}SDR[TP]V 3.3478 - 159 + 1 1.779 52404.3 1.0 3535 4499 8034 HBL1_DMSO_200M_050219_2,8036 HBL1_DMSO_200M_050219_2,8036,FASHVSPEV False True GQISDRPSL 43.540717 486.74278563261 17852432.0 8034.0 nc|ENSG00000239961|P59901-2|LILRA4;;ENSG00000239961|ENST00000291759|LILRA4 5.613498210906982 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8037 43.542 19.0 2749400.0 25 0 337050.0 + 41044 VMINKATPY 9 76 518.7775878301118 1035.5406227270234 2 518.7786743044853 MULTI CID FTMS 0 0 0 8034 2986984.0 0.3579602174281421 -3 0.1634407043457031 3 Unmodified _VMINKATPY_ ENSG00000170906|ENST00000485876|NDUFA3 21.53697664764585 0.2571576504437394 4 {[QN]|[E{I|L}]|[KN]}{I|L}ATMVPY 9 6 + 44.377 0.0 0.0 4.2854 4.2854 71.801 0.0 0.0 0.0 8.238536004985761 25.436909460092 8.238536004985761 3.564921830680703 0 0.5994850021680094 0.0 0.805462187404089 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}{I|L}ATMVPY;{[QN]|[E{I|L}]|[KN]}AT{I|L}MVPY;{[QN]|[E{I|L}]|[KN]}A{I|L}TMVPY;{[QN]|[E{I|L}]|[KN]}{I|L}AMTVPY;{[QN]|[E{I|L}]|[KN]}A{I|L}MTVPY;{[QN]|[E{I|L}]|[KN]}{I|L}A{[YC]|[HE]}{I|L}[DP];{[ET]|[MV]}{I|L}N[KA]TPY;{[QN]|[E{I|L}]|[KN]}A{I|L}{[YC]|[HE]}{I|L}[DP];{[ET]|[MV]}{I|L}GG[KA]TPY;{[QN]|[E{I|L}]|[KN]}[PG][YV]VPY 4.2854;3.9411;3.704;3.4145;2.8331;2.7254;2.6446;2.144;1.7554;0.083283 -;-;-;-;-;-;+;-;-;- + 399 1 1.779 47840.5 1.0 3536 4499 8034 HBL1_DMSO_200M_050219_2,8037 HBL1_DMSO_200M_050219_2,8037,VMINKATPY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8038 43.543 40.0 1251400.0 25 0 163110.0 + 12124 GQISDRPSL 9 86 486.758558037648 971.502563142096 2 486.7594482302666 MULTI CID FTMS 0 0 0 8034 874875.5625 0.6509062182289336 -1 0.0930328369140625 4 Unmodified _GQISDRPSL_ ENSG00000239961|ENST00000291759|LILRA4;nc|ENSG00000239961|P59901-2|LILRA4 19.361941925380144 0.3125782356748823 4 {[QG]|[NA]}{I|L}SDR[TP]V 9 2 + 51.149 0.0 0.0 5.2649 5.2649 79.062 0.0 0.0 0.0 14.59491766415944 6.232492903979008 6.232492903979008 6.232492903979008 0 0.8807196863200843 0.744727494896694 0.0 0.0 {[QG]|[NA]}{I|L}SDR[TP]V;{[QG]|[NA]}{I|L}SDR[PS]{I|L};{[QG]|[NA]}{I|L}SDK[EP]V;{[QG]|[NA]}{I|L}SD[VG][TP]V;{[QG]|[NA]}{I|L}SDK[DP]{I|L};{[QG]|[NA]}{I|L}SD[VG][PS]{I|L};{[QG]|[NA]}{I|L}{I|L}[MN][TP]V;{[QG]|[NA]}{I|L}{I|L}[MN][PS]{I|L} 5.2649;4.6234;4.5455;4.3171;3.9039;3.6756;3.025;2.3835 -;+;-;-;-;-;-;- + 137 + 1 1.779 44365.0 1.0 3537 4499 8034 HBL1_DMSO_200M_050219_2,8038 HBL1_DMSO_200M_050219_2,8038,GQISDRPSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8039 43.545 110.0 602440.0 25 0 33936.0 + 6457 EAFKNRMEV 9 87 562.2816748229858 1122.5487967127715 2 562.2821533083916 MULTI CID FTMS 0 0 0 8034 621915.9375 0.8752156560936727 1 -0.0786170959472656 5 Unmodified _EAFKNRMEV_ ENSG00000123562|ENST00000441076|MORF4L2 63.22749603027936 0.0242951379232427 4 {[CP]|[EA]}{M(Oxidation (M))|F}KN{[WT]|[RM]}EV 9 0 + 42.33 0.0 0.0 3.7708 3.7708 76.939 0.0 0.0 0.0 19.30909368620867 9.55645316481359 9.55645316481359 9.208187539523747 0 0.9247425010840048 0.0 0.7742275032520141 0.4247425010840047 + + {[CP]|[EA]}{M(Oxidation (M))|F}KN{[WT]|[RM]}EV;{[CP]|[EA]}{M(Oxidation (M))|F}KGG{[WT]|[RM]}EV;{[CP]|[EA]}{M(Oxidation (M))|F}KWW{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WWKDDV;{[CP]|[EA]}{M(Oxidation (M))|F}K[DV]{[SA]|[TG]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[CP]|[EA]}{M(Oxidation (M))|F}[WR]{[SA]|[TG]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.7708;2.9506;2.3949;2.2671;1.6154;0.34379 +;-;-;-;-;- + 176 + 1 1.779 56199.3 1.0 3538 4499 8034 HBL1_DMSO_200M_050219_2,8039 HBL1_DMSO_200M_050219_2,8039,EAFKNRMEV True True EAFKNRMEV 43.545402 562.282153308392 10991918.0 8034.0 ENSG00000123562|ENST00000441076|MORF4L2 6.191967646280925 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8040 43.547 69.0 988050.0 25 0 117100.0 + 31331 RMLPHAPGV 9 91 489.2707683773461 976.5269838214924 2 489.2728454470634 MULTI CID FTMS 0 0 0 8034 589989.4375 0.1472862153798645 -5 0.2116508483886718 6 Unmodified _RMLPHAPGV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 34.10243960390752 0.1078313939113124 4 [TA]VS{I|L}YAPGV 10 6 + 41.34 0.0 0.0 4.2333 4.2333 67.758 0.0 0.0 0.0 4.86371556024956 13.892273813814016 4.86371556024956 1.663865622122671 0 0.8257411238602952 0.7958800173440752 0.5 0.0 [TA]VS{I|L}YAPGV;[TA]VAY{I|L}SPGV;[TA]VS{I|L}Y[QP]V;{[CA]|SS}{I|L}{I|L}PHAPGV;{[CA]|SS}{I|L}{I|L}AYAPGV;[TA]V{[TV]|[{I|L}S]}{M(Oxidation (M))|F}SPGV;{[CA]|SS}{I|L}{I|L}PH[QP]V;{[CA]|SS}{I|L}{I|L}A{M(Oxidation (M))|F}SPGV;{[CA]|SS}{I|L}{I|L}AY[QP]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]SEPR 4.2333;4.0629;3.9669;3.4557;3.2754;2.7815;2.1652;2.0476;1.9849;1.3278 -;-;-;-;-;-;-;-;-;- 251 1 1.779 56618.3 1.0 3539 4499 8034 HBL1_DMSO_200M_050219_2,8040 HBL1_DMSO_200M_050219_2,8040,RMLPHAPGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8041 43.549 65.0 516150.0 25 0 59899.0 + 35092 SQVGPVNENV 10 76 521.760381151193 1041.506209369186 2 521.7617675662041 MULTI CID FTMS 0 0 0 8034 324797.0 0.5466701549190092 -1 0.0930328369140625 7 Unmodified _SQVGPVNENV_ ENSG00000075292|ENST00000264447|ZNF638;ENST00000492262.1_1_2:71654468-71655831:+|nuORF;nc|ENSG00000075292|Q14966-3|ZNF638;nc|ENSG00000075292|Q14966-5|ZNF638 11.494710602746466 0.654671931888957 4 {[QS]|[NT]}VG 4 6 16.44 0.0 0.0 1.5785 0.0 0.0 0.0 667.2995803010796 667.2995803010796 5.020179333578074 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 + {[QS]|[NT]}VG 1.5785 + + 62 1 1.779 35434.9 1.0 3540 4499 8034 HBL1_DMSO_200M_050219_2,8041 HBL1_DMSO_200M_050219_2,8041,SQVGPVNENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8042 43.552 167.0 421880.0 25 0 40303.0 + 15678 IQQGETPGL 9 102 471.7483975365663 941.4822421399326 2 471.7483398318291 MULTI CID FTMS 0 0 0 8034 290505.0 0.9978243809940482 -1 0.0930328369140625 8 Unmodified _IQQGETPGL_ ENSG00000166478|ENST00000396602|ZNF143;ENST00000532305.1_1_11:9546777-9549157:+|nuORF;nc|ENSG00000166478|P52747-2|ZNF143;nc|ENSG00000166478|P52747-3|ZNF143 16.942295170755138 0.3780752226737986 4 [KT]P[DN]TPG{I|L} 9 5 + 21.884 0.0 0.0 2.3244 2.3244 67.316 0.0 0.0 0.0 4.137342758552695 3.802112417116064 3.802112417116064 3.802112417116064 0 0.0 0.0 0.0 0.0 [KT]P[DN]TPG{I|L};[KT]P[DN]TPAV;[KT]YYTPG{I|L};[KT]YYTPAV;[KT]P[DN]T{I|L}[PG];{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}{[QG]|[NA]}PG{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}{[QG]|[NA]}PAV;[KT]YYT{I|L}[PG] 2.3244;1.9206;1.6364;1.2325;0.80412;0.54965;0.1458;0.11603 -;-;-;-;-;-;-;- 381 + 1 1.779 57801.3 1.0 3541 4499 8034 HBL1_DMSO_200M_050219_2,8042 HBL1_DMSO_200M_050219_2,8042,IQQGETPGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8043 43.555 131.0 504000.0 25 0 111680.0 + + 35601 STVEKLYAA 9 94 491.2657630008744 980.5169730685489 2 491.2667419314384 MULTI CID FTMS 0 0 0 8034 267158.03125 0.3341852544329384 -4 0.1790924072265625 9 Unmodified _STVSIIGSFA_ nc|ENSG00000104825|Q15653-2|NFKBIB;ENSG00000104825|ENST00000313582|NFKBIB;ENST00000509705.3_1_19:39390655-39398344:+|nuORF 24.020572477871973 0.4289996903560794 4 {[MG]|[TS]}VSHV[{I|L}P]AA 10 -1 + 28.862 0.0 0.0 2.9435 2.9435 66.779 0.0 0.0 0.0 15.762743881329513 0.0895484265292623 0.0895484265292623 3.0102999566398125 0 0.4247425010840047 0.0 0.0 0.0 {[MG]|[TS]}VSHV[{I|L}P]AA;{[MG]|[TS]}VSH{I|L}[VP]AA;{[MG]|[TS]}VSH{I|L}[Q{I|L}]P;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}HP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[MG]|[TS]}VSH{I|L}[QP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}YA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}VHP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[TV]|[{I|L}S]}[VG]{I|L}HP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}VYA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[TV]|[{I|L}S]}[VG]{I|L}YA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 2.9435;2.6365;2.4047;2.0829;1.9989;1.7759;1.397;1.09;1.09;0.78298 -;-;-;-;-;-;-;-;-;- 398 + 1 1.779 57779.6 1.0 3542 4499 8034 HBL1_DMSO_200M_050219_2,8043 HBL1_DMSO_200M_050219_2,8043,STVSIIGSFA False False STVEKLYAA 43.55455 491.266741931438 4759985.0 8034.0 nc|ENSG00000104825|Q15653-2|NFKBIB;;ENSG00000104825|ENST00000313582|NFKBIB;;ENST00000509705.3_1_19:39390655-39398344:+|nuORF 3.5444511572519937 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8044 43.561 347.0 205270.0 25 0 14594.0 -1 ELELQGRMEF 10 114 634.3024840524013 1266.5904151716024 2 634.3032104372978 MULTI CID FTMS 0 0 0 8034 247692.265625 0.6282611325160019 -1 0.0930328369140625 10 Oxidation (M) _ELELQGRM(Oxidation (M))EF_ ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40 38.17557092003332 0.1768326257063233 4 [AG]{I|L}KQEQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F} 11 -1 + 78.752 0.0 0.0 6.2176 6.2176 85.351 0.0 0.0 0.0 9.093892921715934 10.0 9.093892921715934 9.093892921715934 0 0.6694451763165201 1.3979400086720375 0.3494850021680094 2.091129063296272 [AG]{I|L}KQEQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[AG]{I|L}KQE[AG]A{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[AG]{I|L}K[AG]EQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[AG]{I|L}K[AG]E[AG]A{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[Q{I|L}]K[AG]E[AG]A{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[{I|L}A]EQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[RV]EQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F} 6.2176;5.4997;5.4969;5.4969;4.7786;4.7761;4.7761;4.0554;3.8817;3.8378 -;-;-;-;-;-;-;-;-;- 1016 1 1.779 59101.9 1.0 3543 4499 8034 HBL1_DMSO_200M_050219_2,8044 HBL1_DMSO_200M_050219_2,8044,ELELQGRMEF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8045 43.565 239.0 286760.0 25 0 13350.0 + 2118 APTPAQAQI 9 110 448.7451664676896 895.4757800021791 2 448.7454406619072 MULTI CID FTMS 0 0 0 8034 231170.15625 0.3838315111643264 17 -1.111541748046875 11 Unmodified _APTPAQAQI_ ENSG00000165417|ENST00000553612|GTF2A1;ENST00000298173.7_1_14:81646569-81676264:-|nuORF;nc|ENSG00000165417|P52655-2|GTF2A1 37.97399986684836 0.0865783450051559 4 [TP]PAAQAQ{I|L} 9 2 + 26.395 0.0 0.0 2.9476 2.9476 61.846 0.0 0.0 0.0 7.697600363316681 4.737734923843689 4.737734923843689 0.4575749056067515 0 0.535666875892183 0.0 1.59669816197406 0.0 [TP]PAAQAQ{I|L};[TP]PAAGAAQ{I|L};[TP]PAQAAQ{I|L};[PA][TP]AQAQ{I|L};[PA][TP]AGAAQ{I|L};[DP][KP]QAQ{I|L};[DP][KP]GAAQ{I|L};{[QN]|[E{I|L}]|[KN]}A[HA]E{[QV]|[N{I|L}]|[RA]|[KV]};[PA][TP]QAAQ{I|L} 2.9476;2.8966;2.5332;1.6551;1.604;1.5804;1.5233;1.4112;1.2407 -;-;-;+;-;-;-;-;- + 219 1 1.779 58229.9 1.0 3544 4499 8034 HBL1_DMSO_200M_050219_2,8045 HBL1_DMSO_200M_050219_2,8045,APTPAQAQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8046 43.572 370.0 216780.0 25 0 11292.0 + 40041 VGGDAGLM 8 101 719.3384701312552 718.3311936646552 1 719.3415405154228 MULTI CID FTMS 0 0 0 8034 173055.65625 0.3281413488316035 -4 0.1790924072265625 12 Unmodified _VGGDAGLM_ REV__ENSG00000198355|ENST00000360612|PIM3 14.581692164780916 0.6954967302934248 4 {[QN]|[E{I|L}]|[KN]}VNNM 6 -1 + 65.154 0.0 0.0 9.0702 9.0702 94.374 0.0 0.0 0.0 9.16969318954402 9.16969318954402 9.16969318954402 9.42008053022314 0 1.4291746928241125 1.3979400086720375 1.124803706770636 0.5 {[QN]|[E{I|L}]|[KN]}VNNM;{[QN]|[E{I|L}]|[KN]}VGGNM;{[QN]|[E{I|L}]|[KN]}VNGGM;{[QN]|[E{I|L}]|[KN]}VGGGGM;{[QN]|[E{I|L}]|[KN]}V{[QC]|[C(Carbamidomethyl (C))A]}Q;{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))G]|[NC]}{I|L}Q;[DN]{I|L}{I|L}NM;[DN]MV{I|L}Q;{[QN]|[E{I|L}]|[KN]}{[QD]|[EN]|[WG]|[KD]|[RS]}SQ;[MD]NV{I|L}Q 9.0702;7.7588;7.7588;6.4599;4.8487;3.7186;2.7808;2.5814;2.4479;2.1923 -;-;-;-;-;-;-;-;-;- 298 1 1.779 59947.7 1.0 3545 4499 8034 HBL1_DMSO_200M_050219_2,8046 HBL1_DMSO_200M_050219_2,8046,VGGDAGLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8047 43.586 800.0 195230.0 25 0 28686.0 -1 0 120 621.3238710995049 620.3165946329049 1 621.3242065310478 MULTI CID FTMS 0 0 0 8034 159813.828125 0.0427031730615459 -11 0.3932037353515625 13 4 {[{M(Oxidation (M))|F}C]|[YS]}{I|L}A[PA] 6 -1 + 37.949 0.0 0.0 6.1177 6.1177 84.088 0.0 0.0 0.0 0.4575749056067479 28.485221620214105 0.4575749056067479 7.781964799699992 0 1.25 0.0 1.055462187404089 0.0 {[{M(Oxidation (M))|F}C]|[YS]}{I|L}A[PA];{[TV]|[{I|L}S]}YA[PA];{[{M(Oxidation (M))|F}C]|[YS]}A{I|L}[PA];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}[PA];{[TV]|[{I|L}S]}AY[PA];[DV]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};[{I|L}A]SY[PA];{[SA]|[TG]}{I|L}Y[PA];{[SA]|[TG]}Y{I|L}[PA];[VS]Y[PG]V 6.1177;4.8632;3.9997;3.2646;3.2511;2.9118;2.4082;2.3147;1.8087;1.5284 -;-;-;-;-;-;-;-;-;- 259 1 1.779 116287.2 0.75 3546 4499 8034 HBL1_DMSO_200M_050219_2,8047 HBL1_DMSO_200M_050219_2,8047, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8048 43.593 421.0 412520.0 25 0 32747.0 29430 QLFIVYHRG 9 153 378.2124206520409 0 378.2124206423759 PEAK CID FTMS 0 0 0 8034 163105.484375 0.6491464661467857 -1 0.0930328369140625 14 Unmodified _QLFIVYHRG_ ENSG00000198554|ENST00000360586|WDHD1;nc|ENSG00000198554|O75717-2|WDHD1 15.847184025352805 0.2451986057151378 4 {M(Oxidation (M))|F} 1 8 4.8708 0.0 0.0 0.64564 0.0 0.0 377.2675099058412 227.08297144107652 604.3504813469178 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.64564 + + 15 + 1 1.779 141418.2 1.0 3547 4499 8034 HBL1_DMSO_200M_050219_2,8048 HBL1_DMSO_200M_050219_2,8048,QLFIVYHRG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8049 43.599 343.0 386120.0 25 0 50294.0 + 43662 YARPSSEVI 9 102 511.26898500022224 1020.5234170672444 2 511.2715331912041 MULTI CID FTMS 0 0 0 8034 117283.4296875 0.0596917296760833 -5 0.2116508483886718 15 Unmodified _YARPSSEVI_ ENSG00000066044|ENST00000407627|ELAVL1;nc|ENSG00000066044|Q15717-2|ELAVL1 41.8396318013385 0.0653578398400075 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[PS]SEV{I|L} 9 0 + 71.405 0.0 0.0 6.9969 6.9969 94.357 0.0 0.0 0.0 21.75173648495437 61.03917193908117 21.75173648495437 41.139526681308666 0 0.9247425010840048 1.6989700043360187 0.805462187404089 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[PS]SEV{I|L};{[TV]|[{I|L}S]}[RH]HC(Carbamidomethyl (C))V{I|L};{[ES]|[DT]|[{I|L}C]}R[RD]{M(Oxidation (M))|F}V{I|L};[PS]{[ES]|[DT]|[{I|L}C]}{[QV]|[N{I|L}]|[RA]|[KV]}YV{I|L};{[ES]|[DT]|[{I|L}C]}[PS]{[QV]|[N{I|L}]|[RA]|[KV]}YV{I|L};{[ES]|[DT]|[{I|L}C]}[VP][KC]{M(Oxidation (M))|F}V{I|L} 6.9969;2.9657;2.9368;2.728;2.4204;2.1068 +;-;-;-;-;- + 376 1 1.779 105264.4 1.0 3548 4499 8034 HBL1_DMSO_200M_050219_2,8049 HBL1_DMSO_200M_050219_2,8049,YARPSSEVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8050 43.613 800.0 132470.0 25 0 29537.0 + -1 YELIRCRYWCR 11 100 837.8995769227996 1673.7846009123991 2 837.9020263552666 MULTI CID FTMS 0 0 0 8034 93575.9921875 1.0 0 0.0 16 2 Carbamidomethyl (C) _YELIRC(Carbamidomethyl (C))RYWC(Carbamidomethyl (C))R_ REV__ENSG00000272333|ENST00000420124|KMT2B 0.3070304955306653 0.8736993455979228 4 {[VA]|[{I|L}G]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}PPGV 9 -1 43.698 0.0 0.0 2.6107 0.0 0.0 0.0 833.2964166685116 833.2964166685116 17.82867243087606 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.0387254899964358 0.0 {[VA]|[{I|L}G]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}PPGV 2.6107 - 1535 1 1.779 76598.6 0.5600000023841858 3549 4499 8034 HBL1_DMSO_200M_050219_2,8050 HBL1_DMSO_200M_050219_2,8050,YELIRCRYWCR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8052 43.629 800.0 120280.0 25 0 27153.0 + 45952 YYYDTHTNTY 10 97 670.7744652680572 1339.5343776029142 2 670.7756225466728 MULTI CID FTMS 0 0 0 8051 148604.828125 0.0733677818890158 7 -0.2870750427246094 1 Unmodified _YYYDTHTNTY_ ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2 79.59630418116434 0.0173986606250113 4 YYYD{[NV]|[RG]}[HC]TY 10 4 + 79.688 0.0 0.0 5.9489 5.9489 73.763 0.0 0.0 0.0 17.69672784728506 9.836740400816026 9.836740400816026 1.0894464544462323 0 0.805462187404089 2.0 1.95597718523608 0.2742275032520141 YYYD{[NV]|[RG]}[HC]TY;YYQYNTYYY;YYQYTNYYY;YYYHN[WM]TY;YY[AG]YNTYYY;YYQYGGTYYY;YYYH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DG]TY;YYY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[NG]TY;YY[AG]YTNYYY;YYQYTGGYYY 5.9489;5.8676;5.4182;5.2832;5.1802;5.1802;5.002;4.8463;4.7307;4.7307 -;-;-;-;-;-;-;-;-;- 2129 + 1 1.779 73099.5 0.949999988079071 3550 4500 8051 HBL1_DMSO_200M_050219_2,8052 HBL1_DMSO_200M_050219_2,8052,YYYDTHTNTY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8053 43.631 66.0 825560.0 25 0 55203.0 25564 NEVVSQASFY 10 98 572.269084883696 1142.523616834192 2 572.2699462771416 MULTI CID FTMS 0 0 0 8051 813889.6875 1.0 0 0.0 2 Unmodified _NEVVSQASFY_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000461872.6_1_6:152697909-152949466:-|nuORF;nc|ENSG00000131018|Q8NF91-10|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1;SYNE1|p.A1982Sfs*14|1|0.3|ENSG00000131018|chr6:152416493-152416494|-/T|frameshift_variant 22.736283301280096 0.4578556481593033 4 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}YN 6 8 27.829 0.0 0.0 2.4358 0.0 0.0 0.0 407.1557328832732 407.1557328832732 7.317488425803038 0.0 0.0 0.0 0 0.0 0.721246399047171 0.2742275032520141 0.6861818737241735 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}YN 2.4358 - 344 1 1.779 46242.6 1.0 3551 4500 8051 HBL1_DMSO_200M_050219_2,8053 HBL1_DMSO_200M_050219_2,8053,NEVVSQASFY False True IYNEVNQTY 43.63102 572.269946277142 5823609.5 8051.0 ENSG00000169371|ENST00000308588|SNUPN 4.068511803944905 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8054 43.638 360.0 210250.0 25 0 23535.0 + + -1 ASNDYTQQATQSYG 14 101 788.3310221105246 1574.647491287849 2 788.3318969607353 MULTI CID FTMS 0 0 0 8051 223898.0 0.176264726950096 -6 0.2902679443359375 3 Oxidation (M) _YSYM(Oxidation (M))RDYYDRQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 1.3295316138638542 0.8688751186870782 4 [DN]{[CP]|[EA]}YTQQA 9 -1 45.963 0.0 0.0 2.919 0.0 0.0 0.0 551.2083680617175 551.2083680617175 20.027100189976167 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 1.5994850021680094 0.6861818737241735 [DN]{[CP]|[EA]}YTQQA 2.919 - 2420 1 1.779 55687.0 1.0 3552 4500 8051 HBL1_DMSO_200M_050219_2,8054 HBL1_DMSO_200M_050219_2,8054,YSYMRDYYDRQ False False ASNDYTQQATQSYG 43.637539 788.331896960735 21876578.0 8051.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 8.015922864278158 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8055 43.642 238.0 547080.0 25 0 61246.0 + 38976 TVPVKIDKV 9 154 333.54625277282946 997.6169289186884 3 333.5462524294853 MULTI CID FTMS 0 0 0 8051 217623.046875 0.261351281567251 -4 0.2420578002929687 4 Unmodified _TVPVKIDKV_ ENSG00000167881|ENST00000307877|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68 30.7034409873982 0.1405282614900322 4 {[TV]|[{I|L}S]}PVK{NN|[MP]|[D{I|L}]|[EV]}KV 9 0 + 55.879 0.0 0.0 5.6012 5.6012 73.44 0.0 0.0 0.0 34.926712890127135 13.615745043515531 13.615745043515531 1.7339374311232802 0 0.3054621874040891 2.0 1.579689690656103 0.0 + + {[TV]|[{I|L}S]}PVK{NN|[MP]|[D{I|L}]|[EV]}KV;{[TV]|[{I|L}S]}VPK{NN|[MP]|[D{I|L}]|[EV]}KV;{[TV]|[{I|L}S]}PVVG{I|L}SKV;{[TV]|[{I|L}S]}VPVG{I|L}SKV;{[TV]|[{I|L}S]}VGKVVPTV;{[TV]|[{I|L}S]}VGVKVPTV;{[TV]|[{I|L}S]}[{I|L}T]VK{I|L}QP;{[TV]|[{I|L}S]}V[{I|L}T]K{I|L}QP;{[TV]|[{I|L}S]}[{I|L}T]KV{I|L}QP;{[TV]|[{I|L}S]}V[{I|L}T]K[QP]{I|L} 5.6012;5.4274;5.1737;4.9999;3.468;3.2915;2.9445;2.9445;2.768;2.4387 +;-;-;-;-;-;-;-;-;- + 483 + 1 1.779 107480.8 1.0 3553 4500 8051 HBL1_DMSO_200M_050219_2,8055 HBL1_DMSO_200M_050219_2,8055,TVPVKIDKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8057 43.647 5.5 10477000.0 25 0 1001700.0 + 24988 MPPPPPQGV 9 87 460.23852327962805 918.462493626056 2 460.2391845583916 MULTI CID FTMS 0 0 0 8056 9984833.0 0.5387874064202085 43 -3.429218292236328 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 59.79521254764295 0.0261954583213598 4 [VG]EHPP 6 7 32.331 0.0 0.0 3.5201 0.0 0.0 0.0 299.13104766341866 299.13104766341866 12.311664372593077 0.0 0.0 0.0 0 0.6747425010840047 1.6989700043360187 0.0 0.0 [VG]EHPP 3.5201 - 181 1 1.779 50949.5 1.0 3554 4501 8056 HBL1_DMSO_200M_050219_2,8057 HBL1_DMSO_200M_050219_2,8057,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8058 43.648 17.0 3780200.0 25 0 917460.0 + 21237 LPDKGQKLI 9 81 337.8781051567177 1010.6124860703532 3 337.8779785037041 MULTI CID FTMS 0 0 0 8056 3399046.25 0.7351742684288259 -3 0.2003555297851562 2 Unmodified _LPDKGQKLI_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 34.40172386719151 0.1061884637610825 4 {I|L}PDK{[QG]|[NA]}K{I|L}{I|L} 9 0 + 44.351 0.0 0.0 4.3885 4.3885 84.123 0.0 0.0 0.0 23.53871964321762 3.3205533784473573 3.3205533784473573 44.35086988803299 0 0.5 1.154901959985743 0.0 0.0 + + {I|L}PDK{[QG]|[NA]}K{I|L}{I|L} 4.3885 + + 198 + 1 1.779 64011.7 1.0 3555 4501 8056 HBL1_DMSO_200M_050219_2,8058 HBL1_DMSO_200M_050219_2,8058,LPDKGQKLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8059 43.649 32.0 2187300.0 25 0 235150.0 + 3225 AWPEKRGEI 9 75 362.5294940101128 1084.5666526305386 3 362.5293151736259 MULTI CID FTMS 0 0 0 8056 1684471.0 0.5563966150552715 14 -0.8974342346191406 3 Unmodified _AWPEKRGEI_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 22.736283301280096 0.2418982879461534 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 5 4 43.94 0.0 0.0 4.0514 0.0 0.0 0.0 470.2363985651001 470.2363985651001 28.723637474483468 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.3494850021680094 0.0 + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 4.0514 + + 65 + 1 1.779 67297.3 1.0 3556 4501 8056 HBL1_DMSO_200M_050219_2,8059 HBL1_DMSO_200M_050219_2,8059,AWPEKRGEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8060 43.65 40.0 1138000.0 25 0 146870.0 + 25192 MTDDKITEV 9 88 526.2519733644158 1050.4893937956317 2 526.2526122927666 MULTI CID FTMS 0 0 0 8056 1258111.25 0.541508113079966 -3 0.2003555297851562 4 Unmodified _MTDDKITEV_ chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;ENSG00000148773|ENST00000368654|MKI67;nc|ENSG00000148773|P46013-2|MKI67;nc|ENSG00000148773|P46013-2|MKI67 41.95555342248728 0.0647214845423414 4 MT[{M(Oxidation (M))|F}V]T{I|L}D 7 6 61.352 0.0 0.0 5.8404 0.0 0.0 0.0 240.09890161685783 240.09890161685783 42.7071733181415 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 1.305462187404089 0.0 MT[{M(Oxidation (M))|F}V]T{I|L}D 5.8404 - 964 + 1 1.779 41843.9 1.0 3557 4501 8056 HBL1_DMSO_200M_050219_2,8060 HBL1_DMSO_200M_050219_2,8060,MTDDKITEV True True MTDDKITEV 43.65007 526.252612292767 15026016.0 8056.0 nc|ENSG00000148773|P46013-2|MKI67;;ENSG00000148773|ENST00000368654|MKI67;;chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67 5.30197540918986 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8061 43.651 43.0 1142800.0 25 0 75923.0 + 36610 TAPPNAYTV 9 76 467.2365671583473 932.4585813834948 2 467.2375671267509 MULTI CID FTMS 0 0 0 8056 1274763.625 0.8403864582704128 1 -0.034088134765625 5 Unmodified _TAPPNAYTV_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 32.30548876998284 0.1201446275138228 4 AYTV[TA] 6 6 30.406 0.0 0.0 3.2608 0.0 0.0 308.14851576972814 0.0 308.14851576972814 0.0 10.955612550363796 0.0 0.0 0 0.0 0.0 0.5 0.0 AYTV[TA] 3.2608 - 188 1 1.779 43488.1 1.0 3558 4501 8056 HBL1_DMSO_200M_050219_2,8061 HBL1_DMSO_200M_050219_2,8061,TAPPNAYTV True True TAPPNAYTV 43.65126 467.237567126751 46432664.0 8056.0 ENSG00000244038|ENST00000602624|DDOST;;nc|ENSG00000244038|P39656|DDOST;;nc|ENSG00000244038|P39656-3|DDOST;;nc|ENSG00000244038|P39656-2|DDOST 5.918837388356526 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8062 43.653 79.0 872010.0 25 0 121890.0 + 3221 AWPEKRGEI 9 53 543.2904189954048 1084.5662850576095 2 543.2908203005791 MULTI CID FTMS 0 0 0 8056 708107.9375 0.5331792299991087 13 -0.8273200988769531 6 Unmodified _AWPEKRGEI_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 12.240655878213236 0.5053430591993562 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 5 4 36.555 0.0 0.0 3.3704 0.0 0.0 0.0 470.2361544244751 470.2361544244751 22.7962253513872 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 3.3704 + + 16 + 1 1.779 61285.4 1.0 3559 4501 8056 HBL1_DMSO_200M_050219_2,8062 HBL1_DMSO_200M_050219_2,8062,AWPEKRGEI False True AWPEKRGEI 43.65307 543.290820300579 1081013016.0 8056.0 ENSG00000133313|ENST00000324262|CNDP2;;nc|ENSG00000133313|Q96KP4-2|CNDP2;;ENST00000582620.5_1_18:72167208-72179735:+|nuORF 4.378724257151286 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8063 43.655 92.0 757110.0 25 0 91832.0 + 26827 PAQSAGPLSV 10 103 463.7503539934432 925.4861550536864 2 463.7506591677666 MULTI CID FTMS 0 0 0 8056 692318.125 0.0968810756806389 8 -0.4218292236328125 7 Unmodified _PAQSAGPLSV_ REV__ENST00000382162.7_1_22:32000383-32001012:+|nuORF 36.12702656103203 0.1984647928738587 4 {[QS]|[NT]}{I|L}PAQ 6 -1 26.385 0.0 0.0 2.8509 0.0 0.0 0.0 298.1434175871428 298.1434175871428 3.694992958118579 0.0 0.0 0.0 0 0.9247425010840048 0.7695510786217261 0.0 0.2742275032520141 {[QS]|[NT]}{I|L}PAQ 2.8509 - 545 1 1.779 59422.0 1.0 3560 4501 8056 HBL1_DMSO_200M_050219_2,8063 HBL1_DMSO_200M_050219_2,8063,PAQSAGPLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8064 43.658 152.0 539460.0 25 0 59247.0 32570 SASRGSIK 8 105 403.2288439868252 804.4431350404504 2 403.2258788943291 MULTI CID FTMS 0 0 0 8056 364056.6875 1.0 0 0.0 8 Unmodified _SASRGSIK_ ENSG00000143258|ENST00000368002|USP21;ENST00000485277.1_1_1:161133669-161135234:+|nuORF;ENST00000487163.5_1_1:161134308-161135234:+|nuORF;nc|ENSG00000143258|Q9UK80-3|USP21 7.910154910731844 0.7763180056447161 4 {[DA]|[EG]}YV{I|L}PK 7 6 + 60.679 0.0 0.0 7.5429 7.5429 94.315 0.0 0.0 0.0 49.579569145996345 12.786144654057663 12.786144654057663 18.896292993866552 0 0.4247425010840047 2.0 0.0 0.1237125054200235 {[DA]|[EG]}YV{I|L}PK;{[DA]|[EG]}YVK[{I|L}P];{[DA]|[EG]}[KS][KG]TV 7.5429;5.194;1.3113 -;-;- 66 + 1 1.779 68926.6 1.0 3561 4501 8056 HBL1_DMSO_200M_050219_2,8064 HBL1_DMSO_200M_050219_2,8064,SASRGSIK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8065 43.664 311.0 282490.0 25 0 28965.0 + 1001 AFYEHAQTY 9 104 565.2507094118407 1128.486865890481 2 565.2513305544853 MULTI CID FTMS 0 0 0 8056 246927.375 0.4785245867983933 -3 0.2003555297851562 9 Unmodified _AFYEHAQTY_ ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11 62.57269311338072 0.0246576765497938 4 [HV]YTQA{M(Oxidation (M))|F}TY 9 5 + 68.669 0.0 0.0 6.085 6.085 88.377 0.0 0.0 0.0 46.08857830256703 14.09256854528806 14.09256854528806 13.128039559972152 0 1.1549471895720984 0.0 0.9802046884880936 0.6505149978319906 [HV]YTQA{M(Oxidation (M))|F}TY;{[YC]|[HE]}YA{M(Oxidation (M))|F}AGATY;{[YC]|[HE]}YA{M(Oxidation (M))|F}AQTY;[HV]YT[AG]A{M(Oxidation (M))|F}TY;{[YC]|[HE]}YAQ{M(Oxidation (M))|F}ATY;[HV]{[CA]|SS}A{M(Oxidation (M))|F}A{M(Oxidation (M))|F}TY;{[MS]|[{M(Oxidation (M))|F}A]}[QA][NP]A{M(Oxidation (M))|F}TY;{[YC]|[HE]}YA{M(Oxidation (M))|F}QATY;{[YC]|[HE]}AY{M(Oxidation (M))|F}AGATY;{[YC]|[HE]}AY{M(Oxidation (M))|F}AQTY 6.085;4.9217;4.7657;4.6926;4.4989;4.466;4.3851;4.3429;4.1452;3.9891 -;-;-;-;-;-;-;-;-;- 1552 + 1 1.779 71380.7 1.0 3562 4501 8056 HBL1_DMSO_200M_050219_2,8065 HBL1_DMSO_200M_050219_2,8065,AFYEHAQTY True True AFYEHAQTY 43.663764 565.251330554485 7682287.0 8056.0 ENSG00000168538|ENST00000334690|TRAPPC11;;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;;ENST00000509857.5_1_4:184585182-184595983:+|nuORF 8.336373964945475 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8066 43.668 234.0 390530.0 25 0 46915.0 + -1 SAYAPARL 8 101 424.73176197114987 847.4489710090998 2 424.7337829470634 MULTI CID FTMS 0 0 0 8056 245083.28125 0.2728837954590308 -6 0.2864151000976562 10 Carbamidomethyl (C) _ATLSLALC(Carbamidomethyl (C))_ ENSG00000162063|ENST00000397066|CCNF 19.438996006549623 0.6237395211498085 4 [TA]{I|L}Q{I|L}SC{I|L} 8 -1 + 43.232 0.0 0.0 5.1015 5.1015 68.4 0.0 0.0 0.0 0.189549981487076 0.189549981487076 0.189549981487076 0.189549981487076 0 0.9876954943324544 1.5228787452803376 0.3054621874040891 0.0 [TA]{I|L}Q{I|L}SC{I|L};{[SA]|[TG]}Y{I|L}Q{I|L}[PG];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}Q{I|L}[PG];[TA]V[RV]SC{I|L};{[SA]|[TG]}Y[RV]V[PG];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[RV]V[PG];{[SA]|[TG]}YA{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L};{[SA]|[TG]}{I|L}[RV]SC{I|L};[TA]PS[MT]K{I|L};{[SA]|[TG]}[RV]YV[PG] 5.1015;5.0791;4.9523;4.3785;4.3562;4.2294;4.1046;3.8707;3.7885;2.7689 -;-;-;-;-;-;-;-;-;- 265 + 1 1.779 73585.6 1.0 3563 4501 8056 HBL1_DMSO_200M_050219_2,8066 HBL1_DMSO_200M_050219_2,8066,ATLSLALC False False SAYAPARL 43.668141 424.733782947063 3856301.5 8056.0 ENSG00000162063|ENST00000397066|CCNF 3.343834400177002 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8067 43.676 453.0 309960.0 25 0 41910.0 27790 PLPPPPPPP 9 120 454.7654400354143 907.5163271376288 2 454.7663757205009 MULTI CID FTMS 0 0 0 8056 158284.609375 0.7053680853548292 2 -0.07745361328125 11 Unmodified _PLPPPPPPP_ ENSG00000009694|ENST00000371130|TENM1;ENSG00000100312|ENST00000216139|ACR;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000117560|ENST00000367721|FASLG;ENSG00000124496|ENST00000695948|TRERF1;ENSG00000126460|ENST00000246794|PRRG2;ENSG00000132510|ENST00000448097|KDM6B;ENSG00000138771|ENST00000296043|SHROOM3;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000141456|ENST00000572293|PELP1;ENSG00000146083|ENST00000274811|RNF44;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000160685|ENST00000535420|ZBTB7B;ENSG00000170234|ENST00000307063|PWWP2A;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000175073|ENST00000310421|VCPIP1;ENSG00000175785|ENST00000393140|PRIMA1;ENSG00000176182|ENST00000322217|MYPOP;ENSG00000188779|ENST00000380035|SKOR1;ENSG00000204334|ENST00000697325|ERICH2;ENSG00000248905|ENST00000616417|FMN1;ENSG00000259956|ENST00000563281|RBM15B;ENST00000361272.8_2_8:17102747-17104366:-|nuORF;ENST00000379565.7_1_X:20227482-20284914:-|nuORF;ENST00000508096.1_1_10:126605730-126631034:+|nuORF;ENST00000508478.1_1_5:175957081-175957609:-|nuORF;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENST00000596700.5_1_19:50084718-50093643:+|nuORF;ENST00000597121.5_1_19:50086773-50093643:+|nuORF;nc|ENSG00000009694|Q9UKZ4-2|TENM1;nc|ENSG00000110076|P58401|NRXN2;nc|ENSG00000117560|P48023-2|FASLG;nc|ENSG00000124496|Q96PN7|TRERF1;nc|ENSG00000132510|O15054-1|KDM6B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000146083|Q7L0R7-2|RNF44;nc|ENSG00000160685|O15156-2|ZBTB7B;nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170234|Q96N64-2|PWWP2A;nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000175785|Q86XR5-2|PRIMA1;nc|ENSG00000188779|P84550-3|SKOR1;nc|ENSG00000248905|Q68DA7-5|FMN1;REV__ENSG00000048991|ENST00000683871|R3HDM1;REV__ENSG00000066855|ENST00000262146|MTFR1;REV__ENSG00000068489|ENST00000262293|PRR11;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000100592|ENST00000360909|DAAM1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000119596|ENST00000325680|YLPM1;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000125740|ENST00000353609|FOSB;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__ENSG00000132510|ENST00000448097|KDM6B;REV__ENSG00000135250|ENST00000393651|SRPK2;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138081|ENST00000403359|FBXO11;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__ENSG00000141431|ENST00000269197|ASXL3;REV__ENSG00000145414|ENST00000274054|NAF1;REV__ENSG00000146122|ENST00000274867|DAAM2;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152409|ENST00000396137|JMY;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000157827|ENST00000288670|FMNL2;REV__ENSG00000162775|ENST00000369784|RBM15;REV__ENSG00000164916|ENST00000328914|FOXK1;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000173166|ENST00000319170|RAPH1;REV__ENSG00000173917|ENST00000330070|HOXB2;REV__ENSG00000175073|ENST00000310421|VCPIP1;REV__ENSG00000176624|ENST00000406189|MEX3C;REV__ENSG00000186472|ENST00000333891|PCLO;REV__ENSG00000187017|ENST00000645284|ESPN;REV__ENSG00000187164|ENST00000355371|SHTN1;REV__ENSG00000203485|ENST00000392634|INF2;REV__ENSG00000215045|ENST00000457091|GRID2IP;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000274209|ENST00000620264|ANTXRL;REV__ENST00000324225.8_1_11:117049861-117050083:+|nuORF;REV__ENST00000358635.7_1_4:140005384-140005639:-|nuORF;REV__ENST00000368219.1_1_1:156698226-156698472:-|nuORF;REV__ENST00000379565.7_1_X:20227482-20284914:-|nuORF;REV__ENST00000424808.6_1_8:66582187-66620357:+|nuORF;REV__ENST00000471339.1_1_5:173036657-173043649:-|nuORF;REV__ENST00000519935.1_1_7:27209203-27211037:+|nuORF;REV__ENST00000587358.1_1_19:45974364-45976267:+|nuORF;REV__nc|ENSG00000048991|Q15032-2|R3HDM1;REV__nc|ENSG00000048991|Q15032-3|R3HDM1;REV__nc|ENSG00000048991|Q15032-4|R3HDM1;REV__nc|ENSG00000048991|Q15032|R3HDM1;REV__nc|ENSG00000066855|Q15390-2|MTFR1;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100592|Q9Y4D1-3|DAAM1;REV__nc|ENSG00000100592|Q9Y4D1|DAAM1;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000119596|P49750-1|YLPM1;REV__nc|ENSG00000119596|P49750-3|YLPM1;REV__nc|ENSG00000125740|P53539-10|FOSB;REV__nc|ENSG00000125740|P53539-2|FOSB;REV__nc|ENSG00000125740|P53539-3|FOSB;REV__nc|ENSG00000125740|P53539-5|FOSB;REV__nc|ENSG00000125740|P53539-8|FOSB;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1;REV__nc|ENSG00000132510|O15054-1|KDM6B;REV__nc|ENSG00000135250|P78362|SRPK2;REV__nc|ENSG00000138081|Q86XK2-4|FBXO11;REV__nc|ENSG00000138081|Q86XK2-5|FBXO11;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3;REV__nc|ENSG00000140836|Q15911-2|ZFHX3;REV__nc|ENSG00000146122|Q86T65-4|DAAM2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000157827|Q96PY5|FMNL2;REV__nc|ENSG00000162775|Q96T37-2|RBM15;REV__nc|ENSG00000162775|Q96T37-3|RBM15;REV__nc|ENSG00000162775|Q96T37-4|RBM15;REV__nc|ENSG00000170004|Q12873-3|CHD3;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__nc|ENSG00000187017|B1AK53-2|ESPN;REV__nc|ENSG00000187164|A0MZ66-2|SHTN1;REV__nc|ENSG00000187164|A0MZ66-3|SHTN1;REV__nc|ENSG00000187164|A0MZ66-4|SHTN1;REV__nc|ENSG00000187164|A0MZ66-5|SHTN1;REV__nc|ENSG00000187164|A0MZ66-6|SHTN1;REV__nc|ENSG00000187164|A0MZ66-8|SHTN1;REV__nc|ENSG00000203485|Q27J81-2|INF2;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__PCLO|p.V3720Sfs*2|1|0.13|ENSG00000186472|chr7:82916828-82916829|-/T|frameshift_variant 56.04830969593885 0.0282699710924866 4 [{I|L}P]PPPP[YK] 8 3 + 43.664 0.0 0.0 4.8113 4.8113 74.668 0.0 0.0 0.0 4.191293077419758 6.989700043360188 4.191293077419758 4.191293077419758 0 1.2059771852360797 1.5228787452803376 0.0 0.0 [{I|L}P]PPPP[YK];[YK]{I|L}PP[YK];[YK]P{I|L}P[YK];[{I|L}P][YK]P[YK];{[HG]|PP}{I|L}PPP[YK];{[HG]|PP}P{I|L}PP[YK];{[HG]|PP}PP{I|L}P[YK];[YK]PP{I|L}[YK];[{I|L}P]P[YK][YK];[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[YK] 4.8113;4.3495;3.93;3.2779;3.046;3.046;2.6265;2.5201;2.2561;1.868 -;-;-;-;-;-;-;-;-;- 378 1 1.779 113631.9 1.0 3564 4501 8056 HBL1_DMSO_200M_050219_2,8067 HBL1_DMSO_200M_050219_2,8067,PLPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8069 43.681 61.0 1435100.0 25 0 177540.0 + 13937 HYIDRVRAL 9 84 381.55242642977817 1141.6354498895346 3 381.5524169802666 MULTI CID FTMS 0 0 0 8068 845793.125 0.7304674688660324 2 -0.0889015197753906 1 Unmodified _HYIDRVRAL_ ENSG00000176619|ENST00000325327|LMNB2 38.61474834105838 0.0830609365873449 4 HY{I|L}DRVRA{I|L} 9 0 + 72.666 0.0 0.0 6.3651 6.3651 91.079 0.0 0.0 0.0 50.44739902836845 5.951389271089482 5.951389271089482 23.226825097560425 0 0.9291746928241128 1.6989700043360187 0.0 0.8494850021680094 + + HY{I|L}DRVRA{I|L};H{I|L}YDRVRA{I|L};{I|L}HYDRVRA{I|L};{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[NP]RVRA{I|L} 6.3651;4.3305;3.8926;0.86987 +;-;-;- + 156 + 1 1.779 76110.2 1.0 3565 4502 8068 HBL1_DMSO_200M_050219_2,8069 HBL1_DMSO_200M_050219_2,8069,HYIDRVRAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8070 43.687 361.0 146030.0 25 0 17528.0 + 38377 TQVEASEESAL 11 89 582.2745354886938 1162.5345180441875 2 582.2748290896416 MULTI CID FTMS 0 0 0 8068 122461.6171875 0.7401965932351648 -2 0.0627937316894531 2 Unmodified _TQVEASEESAL_ ENSG00000178988|ENST00000320848|MRFAP1L1;ENSG00000179010|ENST00000382581|MRFAP1 21.59015148037692 0.5852593066373742 4 {[SA]|[TG]}AV{[CP]|[EA]}SE[SG][KQ] 12 5 + 30.251 0.0 0.0 2.6022 2.6022 67.986 0.0 0.0 0.0 4.011100554615435 4.71726222832956 4.011100554615435 4.011100554615435 0 0.0 0.585026652029182 0.75 0.0 {[SA]|[TG]}AV{[CP]|[EA]}SE[SG][KQ];[QT]V{[CP]|[EA]}SE[SG][KQ];{[SA]|[TG]}G{I|L}{[CP]|[EA]}SE[SG][KQ];{[QS]|[NT]}{I|L}{[CP]|[EA]}SE[SG][KQ];{NN|[MP]|[D{I|L}]|[EV]}A[QT]SE[SG][KQ];{NN|[MP]|[D{I|L}]|[EV]}A[C(Carbamidomethyl (C))R]E[SG][KQ] 2.6022;2.2572;1.6739;1.5916;0.96245;0.39681 -;-;-;-;-;- 129 1 1.779 47722.8 1.0 3566 4502 8068 HBL1_DMSO_200M_050219_2,8070 HBL1_DMSO_200M_050219_2,8070,TQVEASEESAL False True TQVEASEESAL 43.68723 582.274829089642 1446051.5 8068.0 ENSG00000179010|ENST00000382581|MRFAP1;;ENSG00000178988|ENST00000320848|MRFAP1L1 4.8648520310719805 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8071 43.689 92.0 553390.0 25 0 44405.0 + 37028 TFSNQAESM 9 88 507.713161538349 1013.411770143498 2 507.7138549685478 MULTI CID FTMS 0 0 0 8068 459792.75 0.0314398674335343 -6 0.3048515319824219 3 Unmodified _TFSNQAESM_ ENSG00000133958|ENST00000695012|UNC79;nc|ENSG00000133958|Q9P2D8-2|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;nc|ENSG00000133958|Q9P2D8|UNC79 12.531546534597751 0.4974689918368763 4 SM 2 7 22.717 0.0 0.0 2.2416 0.0 0.0 777.3282262975981 0.0 777.3282262975981 0.0 9.7306616132063 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + SM 2.2416 + + 157 + 1 1.779 46755.6 1.0 3567 4502 8068 HBL1_DMSO_200M_050219_2,8071 HBL1_DMSO_200M_050219_2,8071,TFSNQAESM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8072 43.694 233.0 371100.0 25 0 29671.0 + 41773 VPVESPRAI 9 104 484.2827081372138 966.5508633412276 2 484.2830078005791 MULTI CID FTMS 0 0 0 8068 232761.140625 0.709376676510289 -3 0.1414108276367187 4 Unmodified _VPVESPRAI_ ENSG00000132676|ENST00000368336|DAP3;ENST00000462002.5_1_1:155679570-155696073:+|nuORF;ENST00000471523.1_1_1:155679570-155695881:+|nuORF;ENST00000496863.5_1_1:155679570-155695280:+|nuORF;nc|ENSG00000132676|P51398-3|DAP3 27.628801355627647 0.1796483985696185 4 VPVES 5 4 62.083 0.0 0.0 6.4232 0.0 0.0 0.0 452.2636202447876 452.2636202447876 48.58833010592525 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.0 0.0 + VPVES 6.4232 + + 187 + 1 1.779 69344.9 1.0 3568 4502 8068 HBL1_DMSO_200M_050219_2,8072 HBL1_DMSO_200M_050219_2,8072,VPVESPRAI False True VPVESPRAI 43.693607 484.283007800579 3686548.0 8068.0 nc|ENSG00000132676|P51398-3|DAP3;;ENST00000462002.5_1_1:155679570-155696073:+|nuORF;;ENST00000496863.5_1_1:155679570-155695280:+|nuORF;;ENST00000471523.1_1_1:155679570-155695881:+|nuORF;;ENSG00000132676|ENST00000368336|DAP3 4.801570494969686 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8073 43.698 240.0 298180.0 25 0 24074.0 + 41699 VPSERGDTV 9 93 480.2439781549132 958.4734033766264 2 480.2448608279228 MULTI CID FTMS 0 0 0 8068 206748.453125 0.3888538294806776 -3 0.1414108276367187 5 Unmodified _VPSERGDTV_ ENST00000346693.8_1_X:149935131-149935296:-|nuORF 20.453626601364224 0.2830276176381075 4 VPP[KG]T{[{M(Oxidation (M))|F}D]|MM}V 9 5 + 56.132 0.0 0.0 5.8564 5.8564 73.668 0.0 0.0 0.0 42.63682493045401 5.686362358410122 5.686362358410122 1.2481620982489972 0 0.4247425010840047 2.0 0.0 0.0 VPP[KG]T{[{M(Oxidation (M))|F}D]|MM}V;VPP{[WT]|[RM]}C(Carbamidomethyl (C))TV;VPP[KG]{[{M(Oxidation (M))|F}D]|MM}TV;VPP{[WT]|[RM]}[CG]TV;VPP{[CT]|[{M(Oxidation (M))|F}G]}{[QD]|[EN]|[WG]|[KD]|[RS]}TV;VP{I|L}[{M(Oxidation (M))|F}E][NS][PG];{[QD]|[EN]|[WG]|[KD]|[RS]}W[HV]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QS]|[NT]}Y{[WT]|[RM]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.8564;5.7261;5.0739;4.7598;4.6587;3.0661;0.3397;0.12674 -;-;-;-;-;-;-;- 217 + 1 1.779 57224.9 1.0 3569 4502 8068 HBL1_DMSO_200M_050219_2,8073 HBL1_DMSO_200M_050219_2,8073,VPSERGDTV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8074 43.706 428.0 256050.0 25 0 18640.0 + -1 EVPSSMQPV 9 159 495.2334217574287 988.4522905816574 2 495.2331725955009 MULTI CID FTMS 0 0 0 8068 161563.609375 0.3003117818996303 11 -0.764862060546875 6 Oxidation (M) _EVPSSM(Oxidation (M))QPV_ REV__ENSG00000132549|ENST00000357162|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8-6|VPS13B;REV__nc|ENSG00000132549|Q7Z7G8|VPS13B 32.30548876998284 0.1201446275138228 4 [{I|L}T]QSTK{I|L}T 8 -1 32.228 0.0 0.0 3.2604 0.0 0.0 0.0 112.93654779784416 112.93654779784416 8.671233099557298 0.0 0.0 0.0 0 0.718765315847925 2.0 0.7059771852360797 0.4247425010840047 [{I|L}T]QSTK{I|L}T 3.2604 - 746 1 1.779 85324.9 1.0 3570 4502 8068 HBL1_DMSO_200M_050219_2,8074 HBL1_DMSO_200M_050219_2,8074,EVPSSMQPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8075 43.72 800.0 231390.0 25 0 29947.0 + 45870 YYQTIGNHASY 11 134 658.7984054293943 1315.5822579255885 2 658.7996703982353 MULTI CID FTMS 0 0 0 8068 130733.53125 0.2419108390749098 -4 0.2344436645507812 7 Unmodified _YYQTIGNHASY_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF;nc|ENSG00000185627|Q9UNM6-2|PSMD13 100.7086487251713 0.0002960460221903 4 YYQT{I|L}GN[HA]SY 11 0 + 107.88 0.0 0.0 8.2 8.2 90.48 0.0 0.0 0.0 46.765074976623225 4.318048224298067 4.318048224298067 8.322646798160562 0 1.0994850021680094 2.0 1.3684151806525389 1.4049471895720984 + + YYQT{I|L}GN[HA]SY;YYQTG{I|L}N[HA]SY;YYQT{I|L}GNNA{[WS]|[C(Carbamidomethyl (C)){I|L}]};YY[AG]T{I|L}GN[HA]SY;YYQTGQV[HA]SY;YYQT{I|L}GND{M(Oxidation (M))|F}VP;YYQTG{I|L}NNA{[WS]|[C(Carbamidomethyl (C)){I|L}]};YYQT{I|L}GD[{M(Oxidation (M))|F}V]NP;YY[AG]TG{I|L}N[HA]SY;YYQT{I|L}GGGNA{[WS]|[C(Carbamidomethyl (C)){I|L}]} 8.2;7.5673;7.5325;7.5061;7.4937;7.1649;6.8999;6.8945;6.8735;6.8386 +;-;-;-;-;-;-;-;-;- + 21766 + 1 1.779 137583.9 0.6700000166893005 3571 4502 8068 HBL1_DMSO_200M_050219_2,8075 HBL1_DMSO_200M_050219_2,8075,YYQTIGNHASY True True YYQTIGNHASY 43.719536 658.799670398235 8408115.0 8068.0 ENST00000527047.5_1_11:237024-247462:+|nuORF;;ENSG00000185627|ENST00000532097|PSMD13;;nc|ENSG00000185627|Q9UNM6-2|PSMD13 8.460689703623453 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8077 43.724 14.0 3575600.0 25 0 393090.0 + 41183 VPDQPHPEI 9 66 516.2609455430522 1030.5073381529044 2 516.2620727419853 MULTI CID FTMS 0 0 0 8076 3625499.75 0.8817067124199239 1 -0.0455360412597656 1 Unmodified _VPDQPHPEI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 55.50274090549119 0.0285720310785888 4 VPDQPH 6 3 66.38 0.0 0.0 6.4415 0.0 0.0 0.0 354.16739822852577 354.16739822852577 28.75569708000178 0.0 0.0 0.0 0 1.6549471895720984 1.5228787452803376 0.0 0.4247425010840047 + VPDQPH 6.4415 + + 329 + 1 1.779 49293.6 1.0 3572 4503 8076 HBL1_DMSO_200M_050219_2,8077 HBL1_DMSO_200M_050219_2,8077,VPDQPHPEI True True VPDQPHPEI 43.723986 516.262072741985 221155408.0 8076.0 nc|ENSG00000137265|Q15306-2|IRF4;;ENSG00000137265|ENST00000380956|IRF4;;chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;;ENST00000495137.5_1_6:394829-397293:+|nuORF 8.129073778788248 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8078 43.725 29.0 1989900.0 25 0 202040.0 + 21242 LPDKGQKLI 9 74 506.31376148077777 1010.6129700283556 2 506.3141967654228 MULTI CID FTMS 0 0 0 8076 1773580.625 0.9145399701801848 -3 0.1061592102050781 2 Unmodified _LPDKGQKLI_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 67.83816525789305 0.0219346420158844 4 {I|L}PDK{[QG]|[NA]}K{I|L}{I|L} 9 0 + 78.898 0.0 0.0 7.807 7.807 93.321 0.0 0.0 0.0 59.85731066642202 12.252684618815096 12.252684618815096 11.743361733367491 0 2.353917193908117 2.0 0.4247425010840047 0.0 + + {I|L}PDK{[QG]|[NA]}K{I|L}{I|L};[{I|L}P]DK{[QG]|[NA]}K{I|L}{I|L};[{I|L}P][WE]K{I|L}{I|L}{I|L};[{I|L}P][WE]{I|L}K{I|L}{I|L};[DP]{I|L}K{[QG]|[NA]}K{I|L}{I|L};[DP]K{I|L}{[QG]|[NA]}K{I|L}{I|L};[DP]K{[QG]|[NA]}K{I|L}{I|L}{I|L};[DP]K{[QG]|[NA]}{I|L}K{I|L}{I|L};[PS][VG]{I|L}{[QG]|[NA]}K{I|L}{I|L};[PS][VG]{[QG]|[NA]}K{I|L}{I|L}{I|L} 7.807;6.645;5.7857;5.7591;5.6567;5.2856;4.9663;4.9398;2.8675;2.5482 +;+;-;-;-;-;-;-;-;- + 197 + 1 1.779 52313.7 1.0 3573 4503 8076 HBL1_DMSO_200M_050219_2,8078 HBL1_DMSO_200M_050219_2,8078,LPDKGQKLI True True LPDKGQKLI 43.725165 506.314196765423 282982760.0 8076.0 ENSG00000116830|ENST00000369466|TTF2;;nc|ENSG00000116830|Q9UNY4-2|TTF2 4.292327006657918 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8079 43.727 77.0 689880.0 25 0 109150.0 + 978 AFQHVGKAF 9 80 335.51511937096745 1003.5235287131025 3 335.5153076052666 MULTI CID FTMS 0 0 0 8076 588418.4375 0.8523255389719128 -1 0.043365478515625 3 Unmodified _AFQHVGKAF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 27.628801355627647 0.1796483985696185 4 {M(Oxidation (M))|F} 1 8 14.604 0.0 0.0 1.4553 0.0 0.0 838.4441047402493 0.0 838.4441047402493 0.0 6.645293596321125 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.4553 + + 69 + 1 1.779 48938.3 1.0 3574 4503 8076 HBL1_DMSO_200M_050219_2,8079 HBL1_DMSO_200M_050219_2,8079,AFQHVGKAF False True AFQHVGKAF 43.726926 335.515307605267 4712045.5 8076.0 ENSG00000254772|ENST00000329251|EEF1G;;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;;nc|ENSG00000254772|P26641-2|EEF1G 6.267436504364014 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8080 43.729 103.0 386660.0 25 0 47705.0 + 2634 ASVSQNAIVSA 11 87 523.7770424360086 1045.5395319388172 2 523.7774536013603 MULTI CID FTMS 0 0 0 8076 505088.28125 1.0 0 0.0 4 Unmodified _ASVSQNAIVSA_ ENSG00000113569|ENST00000231498|NUP155;ENST00000507233.1_1_5:37342606-37350289:-|nuORF;nc|ENSG00000113569|O75694-2|NUP155 23.78978130925829 0.5336113198261219 4 {[QV]|[N{I|L}]|[RA]|[KV]}A{M(Oxidation (M))|F}[DP]{I|L}VSA 10 6 {[QV]|[N{I|L}]|[RA]|[KV]}A{M(Oxidation (M))|F}[DP]{I|L} + + 16.24 17.583 2.2824 1.5532 1.5532 44.332 0.0 0.0 0.0 0.0 -0.0853278542425997 -0.0853278542425997 0.0 0 0.0 0.0 0.6237125054200234 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}A{M(Oxidation (M))|F}[DP]{I|L}VSA 1.5532 - 194 + 1 1.779 40342.0 1.0 3575 4503 8076 HBL1_DMSO_200M_050219_2,8080 HBL1_DMSO_200M_050219_2,8080,ASVSQNAIVSA False True ASVSQNAIVSA 43.729138 523.77745360136 3106178.5 8076.0 ENST00000507233.1_1_5:37342606-37350289:-|nuORF;;nc|ENSG00000113569|O75694-2|NUP155;;ENSG00000113569|ENST00000231498|NUP155 2.707098772128423 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8081 43.734 242.0 548860.0 25 0 59749.0 + 31913 RTVPEIEKV 9 133 535.8131887019056 1069.611824470611 2 535.8141967654228 MULTI CID FTMS 0 0 0 8076 414030.65625 0.7364750272405544 -1 0.043365478515625 5 Unmodified _RTVPEIEKV_ ENSG00000104884|ENST00000391945|ERCC2;ENST00000586441.1_1_19:45867568-45872241:-|nuORF;nc|ENSG00000104884|P18074-2|ERCC2 45.739877483867886 0.0497104363764649 4 KE[HA]{I|L}TRV 8 7 37.885 0.0 0.0 3.542 0.0 0.0 117.07935530830234 0.0 117.07935530830234 0.0 14.609178215846654 0.0 0.0 0 0.5 0.0 0.0 1.2302046884880935 KE[HA]{I|L}TRV 3.542 - 223 1 1.779 104690.2 1.0 3576 4503 8076 HBL1_DMSO_200M_050219_2,8081 HBL1_DMSO_200M_050219_2,8081,RTVPEIEKV True True RTVPEIEKV 43.73367 535.814196765423 8156050.5 8076.0 nc|ENSG00000104884|P18074-2|ERCC2;;ENSG00000104884|ENST00000391945|ERCC2;;ENST00000586441.1_1_19:45867568-45872241:-|nuORF 4.714492321014404 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8082 43.736 119.0 536590.0 25 0 30410.0 + 4243 DAPMTPKQI 9 90 500.760018192245 999.5054834512902 2 500.7600890994072 MULTI CID FTMS 0 0 0 8076 405600.0 0.0398249782538534 12 -0.8199806213378906 6 Unmodified _DAPMTPKQI_ ASXL1|p.A1041Pfs*6|1|0.34|ENSG00000171456|chr20:32435833-32435833|G/-|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1;nc|ENSG00000171456|Q8IXJ9-2|ASXL1 47.74868867922204 0.0453060283459952 4 {[DA]|[EG]}PMTPKQ{I|L} 9 0 + 66.402 0.0 0.0 6.6435 6.6435 90.07 0.0 0.0 0.0 48.09680627430876 0.8975548566041738 0.8975548566041738 12.09544243948811 0 0.2887254899964357 1.6989700043360187 0.4247425010840047 0.6694451763165201 + + {[DA]|[EG]}PMTPKQ{I|L};{[DA]|[EG]}PMTPK[AG]{I|L};{[DA]|[EG]}PMTPKAAV;{[DA]|[EG]}P[YV]T[HV]V;{[DA]|[EG]}P[YV]{I|L}[HS]V 6.6435;5.4334;5.2572;2.4718;2.4048 +;-;-;-;- + 520 + 1 1.779 54852.5 1.0 3577 4503 8076 HBL1_DMSO_200M_050219_2,8082 HBL1_DMSO_200M_050219_2,8082,DAPMTPKQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8083 43.741 263.0 741620.0 25 0 71877.0 -1 0 183 300.198961197871 598.383369462542 2 300.1988098025322 MULTI CID FTMS 0 0 0 8076 212560.015625 0.9619383609790136 -1 0.043365478515625 7 4 N 1 -1 11.466 0.0 0.0 1.9161 0.0 0.0 61.05213073858426 420.2765894285847 481.32872016716897 0.0 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.0 N 1.9161 - 9 + 1 1.779 156107.0 1.0 3578 4503 8076 HBL1_DMSO_200M_050219_2,8083 HBL1_DMSO_200M_050219_2,8083, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8084 43.755 800.0 296260.0 25 0 45091.0 -1 QYDDMAACMKS 11 170 676.2490483240111 1350.4835437148222 2 676.2501098513603 MULTI CID FTMS 0 0 0 8076 196053.671875 0.1050617933170992 -4 0.1847763061523437 8 Carbamidomethyl (C),2 Oxidation (M) _QYDDM(Oxidation (M))AAC(Carbamidomethyl (C))M(Oxidation (M))KS_ ENST00000440317.1_1_2:127315208-127315727:-|nuORF 11.494710602746466 0.7960433852372589 4 [YQ]E{I|L}NEY{M(Oxidation (M))|F} 8 -1 71.52 0.0 0.0 5.2959 0.0 0.0 0.0 261.0011080377563 261.0011080377563 44.97277664392469 0.0 0.0 0.0 0 1.0501648626366045 1.3010299956639813 1.110924374808178 0.7742275032520141 [YQ]E{I|L}NEY{M(Oxidation (M))|F} 5.2959 - 3030 + 1 1.779 170079.8 0.8399999737739563 3579 4503 8076 HBL1_DMSO_200M_050219_2,8084 HBL1_DMSO_200M_050219_2,8084,QYDDMAACMKS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8085 43.765 585.0 292590.0 25 0 24038.0 + 41841 VPYGSFKHV 9 183 345.1876136874332 1032.5410116624996 3 345.5212585330009 MULTI CID FTMS 0 0 0 8076 147232.34375 0.7820395820566124 4 -0.1809158325195312 9 Unmodified _VPYGSFKHV_ ENSG00000163935|ENST00000394752|SFMBT1;nc|ENSG00000163935|Q9UHJ3-2|SFMBT1 9.38312468134398 0.5871240394367778 4 VPY 3 6 28.864 0.0 0.0 2.7955 0.0 0.0 0.0 670.3313658378889 670.3313658378889 18.77552552846001 0.0 0.0 0.0 0 0.2666281780378236 0.0 0.0 0.0 + VPY 2.7955 + + 214 + 1 1.779 143119.8 1.0 3580 4503 8076 HBL1_DMSO_200M_050219_2,8085 HBL1_DMSO_200M_050219_2,8085,VPYGSFKHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8087 43.77 49.0 1186700.0 25 0 171460.0 + -1 FELREMVR 8 79 548.2824597880839 1094.5503666429677 2 548.2830078005791 MULTI CID FTMS 0 0 0 8086 1180270.25 1.0 0 0.0 1 Oxidation (M) _FELREM(Oxidation (M))VR_ REV__ENST00000297579.9_1_8:104432557-104433221:+|nuORF 10.073929032068715 0.7620901558688216 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSEPPH[VP] 10 -1 + 53.109 0.0 0.0 4.8521 4.8521 83.439 0.0 0.0 0.0 2.659167939666318 45.66183773464459 2.659167939666318 13.96713777483761 0 1.8494850021680087 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSEPPH[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[MS]|[{M(Oxidation (M))|F}A]}PPH[VP];[{I|L}T]H[WH]H[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[{I|L}T]EH[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VS[HV]SH[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSE[YV][HK];[{I|L}T]{[CP]|[EA]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H[HK];[{I|L}T]H[MD][{I|L}T][HK];[{I|L}T]{[CP]|[EA]}{[QN]|[E{I|L}]|[KN]}SH[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[MS]|[{M(Oxidation (M))|F}A]}[YV][HK] 4.8521;3.5761;3.5231;3.1092;2.7964;2.2113;1.7399;1.7113;1.0635;0.93522 -;-;-;-;-;-;-;-;-;- 315 1 1.776 49783.4 1.0 3581 4504 8086 HBL1_DMSO_200M_050219_2,8087 HBL1_DMSO_200M_050219_2,8087,FELREMVR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8088 43.783 766.0 150790.0 25 0 7205.0 + 45554 YVDDTPAEQM 10 138 584.7447515311932 1167.4749501291865 2 584.7448608279228 MULTI CID FTMS 0 0 0 8086 193663.546875 0.551556140505613 4 -0.1839179992675781 2 Unmodified _YVDDTPAEQM_ ENSG00000136628|ENST00000366923|EPRS1 85.27202061508552 0.012747187882667 4 [YV]D{[ES]|[DT]|[{I|L}C]}PAE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 10 0 + 48.509 0.0 0.0 4.155 4.155 71.164 0.0 0.0 0.0 3.5071123335628585 7.269987279362624 3.5071123335628585 3.5071123335628585 0 0.6382104921644451 2.0 1.325257498915995 0.0 + + [YV]D{[ES]|[DT]|[{I|L}C]}PAE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ES]|[DT]|[{I|L}C]}DYVPAE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};DDTYVPAE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]EAP{[ES]|[DT]|[{I|L}C]}D{I|L}M;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ESVPA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[PA]EYDPA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ES]|[DT]|[{I|L}C]}DVYPAE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};DDTVYPAE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[PA]YEDPA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ESVWE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4.155;3.8546;3.7868;3.5323;3.5288;3.43;3.4116;3.3438;3.1722;3.1397 +;-;-;-;-;-;-;-;-;- + 1847 1 1.776 90842.5 1.0 3582 4504 8086 HBL1_DMSO_200M_050219_2,8088 HBL1_DMSO_200M_050219_2,8088,YVDDTPAEQM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8090 43.788 100.0 714200.0 25 0 99984.0 + 40590 VKTSQVAV 8 76 416.2491117541584 830.4836705751169 2 416.2492858767509 MULTI CID FTMS 0 0 0 8089 882973.9375 0.6243942494279384 4 -0.2806739807128906 1 Unmodified _VKTSQVAV_ REV__ENSG00000104823|ENST00000221418|ECH1;REV__ENST00000601333.1_1_19:39306255-39306727:-|nuORF 14.838274106304384 0.6917062315640577 4 GKV{[VA]|[{I|L}G]} 5 -1 19.23 0.0 0.0 2.3155 0.0 0.0 358.1860523908219 0.0 358.1860523908219 0.0 5.735272328612417 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 GKV{[VA]|[{I|L}G]} 2.3155 - 41 1 1.776 61823.5 1.0 3583 4505 8089 HBL1_DMSO_200M_050219_2,8090 HBL1_DMSO_200M_050219_2,8090,VKTSQVAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8091 43.79 110.0 669160.0 25 0 85524.0 + 38978 TVPVKIDKV 9 89 499.8159981631434 997.6174433930868 2 499.8160888552666 MULTI CID FTMS 0 0 0 8089 355464.9375 0.8931790385003163 -1 0.0181655883789062 2 Unmodified _TVPVKIDKV_ ENSG00000167881|ENST00000307877|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68 23.80106514851385 0.2283505500606397 4 {[TV]|[{I|L}S]}VPK{I|L}[QT]{I|L} 9 5 + 46.436 0.0 0.0 4.6547 4.6547 77.244 0.0 0.0 0.0 22.613941430538134 4.0359843160042175 4.0359843160042175 6.888341600811707 0 0.4247425010840047 2.0 1.079689690656103 0.0 {[TV]|[{I|L}S]}VPK{I|L}[QT]{I|L};{[TV]|[{I|L}S]}V{I|L}TK[QP]{I|L};{[TV]|[{I|L}S]}PVK{I|L}[QT]{I|L};{[TV]|[{I|L}S]}V{I|L}TP[KQ]{I|L};{[TV]|[{I|L}S]}VP[{I|L}T][KQ]{I|L};{[TV]|[{I|L}S]}PV[{I|L}T][KQ]{I|L};{[TV]|[{I|L}S]}V{I|L}[KP][QT]{I|L};{[TV]|[{I|L}S]}[{I|L}T]VK[QP]{I|L};{[TV]|[{I|L}S]}[{I|L}T]VP[KQ]{I|L};{[TV]|[{I|L}S]}[{I|L}T]KV[QP]{I|L} 4.6547;3.9643;3.8518;3.8178;3.5468;2.7439;2.7182;2.0618;1.9153;1.4583 -;-;-;-;-;-;-;-;-;- 509 + 1 1.776 61664.8 1.0 3584 4505 8089 HBL1_DMSO_200M_050219_2,8091 HBL1_DMSO_200M_050219_2,8091,TVPVKIDKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8092 43.795 249.0 303470.0 25 0 15006.0 + 36974 TFGEECYCT 9 113 351.46025377036744 1051.3589319113023 3 351.4602233767509 MULTI CID FTMS 0 0 0 8089 288693.875 0.7339329979571405 -3 0.1070671081542968 3 Unmodified _TFGEECYCT_ REV__ENSG00000041982|ENST00000350763|TNC;REV__nc|ENSG00000041982|P24821-2|TNC;REV__nc|ENSG00000041982|P24821-3|TNC;REV__nc|ENSG00000041982|P24821-4|TNC;REV__nc|ENSG00000041982|P24821-5|TNC;REV__nc|ENSG00000041982|P24821-6|TNC 2.059750862983233 0.8427793054688888 4 TM 2 -1 20.969 0.0 0.0 1.9945 0.0 0.0 0.0 816.2481048239465 816.2481048239465 11.878318069804426 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TM 1.9945 - 32 + 1 1.776 67641.0 1.0 3585 4505 8089 HBL1_DMSO_200M_050219_2,8092 HBL1_DMSO_200M_050219_2,8092,TFGEECYCT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8093 43.798 144.0 311890.0 25 0 35518.0 + 16910 KIINNTENL 9 88 529.7957326593231 1057.576912385446 2 529.7961303591728 MULTI CID FTMS 0 0 0 8089 281361.5625 0.2999591617613361 -2 0.0637016296386718 4 Unmodified _KIINNTENL_ ENSG00000135069|ENST00000376588|PSAT1;nc|ENSG00000135069|Q9Y617-2|PSAT1 41.8396318013385 0.0653578398400075 4 TEN{I|L} 4 5 35.477 0.0 0.0 3.3546 0.0 0.0 582.350877830275 0.0 582.350877830275 0.0 22.201140738196017 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + TEN{I|L} 3.3546 + + 61 1 1.776 40436.6 1.0 3586 4505 8089 HBL1_DMSO_200M_050219_2,8093 HBL1_DMSO_200M_050219_2,8093,KIINNTENL True True KIINNTENL 43.797525 529.796130359173 10627429.0 8089.0 ENSG00000135069|ENST00000376588|PSAT1;;nc|ENSG00000135069|Q9Y617-2|PSAT1 4.5649707317352295 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8094 43.811 800.0 310790.0 25 0 37353.0 -1 CCCYCFFFFFL 11 117 807.3046835250954 1612.5948141169906 2 807.3053466677666 MULTI CID FTMS 0 0 0 8089 229421.171875 1.0 0 0.0 5 3 Carbamidomethyl (C) _CC(Carbamidomethyl (C))C(Carbamidomethyl (C))YC(Carbamidomethyl (C))FFFFFL_ ENST00000494000.1_1_3:172048292-172052928:+|nuORF 0.3506318815782774 0.8734936314171269 4 CPNDY[MT]HYYSYG 13 -1 + 43.295 0.0 0.0 2.6848 2.6848 61.82 0.0 0.0 0.0 20.50376665353955 3.742401767119184 3.742401767119184 0.6214790674884441 0 1.3226825097560422 0.0 0.805462187404089 0.0 CPNDY[MT]HYYSYG;CYYY[MT]HYYSYG;CPNDY[MT]HAE[NS][MT];CYYY[MT]HAE[NS][MT];[WQ]DY[MT]HAE[DN]TC 2.6848;2.6463;1.6866;1.6465;0.14364 -;-;-;-;- 612 + 1 1.776 171621.4 0.8299999833106995 3587 4505 8089 HBL1_DMSO_200M_050219_2,8094 HBL1_DMSO_200M_050219_2,8094,CCCYCFFFFFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8095 43.825 800.0 173230.0 25 0 7293.4 -1 FCCLGFIALAY 11 130 639.3039086557031 1276.5932643782062 2 639.3058959841728 MULTI CID FTMS 0 0 0 8089 136655.546875 0.4546085621331886 -2 0.0637016296386718 6 Carbamidomethyl (C) _FC(Carbamidomethyl (C))CLGFIALAY_ ENSG00000244242|ENST00000340134|IFITM10 15.847184025352805 0.7055071256943262 4 {I|L}AY 3 -1 31.427 0.0 0.0 2.4618 0.0 0.0 911.4003985960042 0.0 911.4003985960042 0.0 3.865680223695272 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}AY 2.4618 + + 395 1 1.776 108818.2 0.7200000286102295 3588 4505 8089 HBL1_DMSO_200M_050219_2,8095 HBL1_DMSO_200M_050219_2,8095,FCCLGFIALAY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8096 43.839 800.0 109350.0 25 0 9445.8 + 35426 STLELSQKQSN 11 104 617.8168364119017 1233.619119890603 2 617.8176147341728 MULTI CID FTMS 0 0 0 8089 121186.0625 0.942934005082494 1 -0.0558090209960937 7 Unmodified _STLELSQKQSN_ REV__ENSG00000163681|ENST00000671191|SLMAP;REV__nc|ENSG00000163681|Q14BN4-2|SLMAP;REV__nc|ENSG00000163681|Q14BN4-3|SLMAP;REV__nc|ENSG00000163681|Q14BN4-4|SLMAP;REV__nc|ENSG00000163681|Q14BN4-5|SLMAP;REV__nc|ENSG00000163681|Q14BN4-8|SLMAP;REV__nc|ENSG00000163681|Q14BN4|SLMAP 41.95555342248728 0.1822715950200113 4 {[MG]|[TS]}{I|L}ESESVQRV 11 -1 + 69.009 0.0 0.0 5.594 5.594 79.764 0.0 0.0 0.0 47.58201737346158 5.670792272733991 5.670792272733991 5.670240868276572 0 1.2614393726401687 0.0 0.8494850021680094 0.0 {[MG]|[TS]}{I|L}ESESVQRV;{[MG]|[TS]}{I|L}ESV{[ES]|[DT]|[{I|L}C]}QRV;{[MG]|[TS]}{I|L}ESESV[AG]RV;{[MG]|[TS]}{I|L}ESESV[RV]Q;{[MG]|[TS]}{I|L}EVS{[ES]|[DT]|[{I|L}C]}QRV;{[MG]|[TS]}{I|L}ESESV[RN]{I|L};{[MG]|[TS]}{I|L}T{[QS]|[NT]}VSH{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[MG]|[TS]}{I|L}ESV{[ES]|[DT]|[{I|L}C]}[AG]RV;{[MG]|[TS]}{I|L}ESV{[ES]|[DT]|[{I|L}C]}[RV]Q;{[MG]|[TS]}{I|L}[KA]SESH{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.594;5.1344;4.854;4.8367;4.7476;4.7395;4.4663;4.3944;4.3771;4.2808 -;-;-;-;-;-;-;-;-;- 1903 + 1 1.776 70784.1 0.6800000071525574 3589 4505 8089 HBL1_DMSO_200M_050219_2,8096 HBL1_DMSO_200M_050219_2,8096,STLELSQKQSN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8098 43.843 16.0 3084600.0 25 0 332970.0 + 41045 VMINKATPY 9 83 518.7775878301118 1035.5406227270234 2 518.7787353396416 MULTI CID FTMS 0 0 0 8097 2994140.25 0.3588178225595958 4 -0.3507347106933594 1 Unmodified _VMINKATPY_ ENSG00000170906|ENST00000485876|NDUFA3 41.8396318013385 0.0653578398400075 4 {[QN]|[E{I|L}]|[KN]}{I|L}ATMVPY 9 6 + 47.814 0.0 0.0 4.6173 4.6173 76.834 0.0 0.0 0.0 6.517864586066224 31.616225017174383 6.517864586066224 6.581531501239297 0 0.5994850021680094 0.0 1.555462187404089 0.6421590589602533 {[QN]|[E{I|L}]|[KN]}{I|L}ATMVPY;{[QN]|[E{I|L}]|[KN]}TA{I|L}MVPY;{[QV]|[N{I|L}]|[RA]|[KV]}KATMVPY;{[ET]|[MV]}{I|L}N[KA]TPY;{[ET]|[MV]}{I|L}GG[KA]TPY;{[QN]|[E{I|L}]|[KN]}{I|L}A{[YC]|[HE]}{I|L}[DP];{[QV]|[N{I|L}]|[RA]|[KV]}KA{[YC]|[HE]}{I|L}[DP];{[ET]|[MV]}{I|L}[H{I|L}][RH]M;{[QN]|[E{I|L}]|[KN]}{I|L}[PG]P[QA][DP];{[QN]|[E{I|L}]|[KN]}{[CP]|[EA]}[H{I|L}]{I|L}[DP] 4.6173;3.9817;3.8001;3.3659;2.4767;1.9352;1.118;0.54912;0.38763;0.24465 -;-;-;+;-;-;-;-;-;- + 225 1 1.776 43606.2 1.0 3590 4506 8097 HBL1_DMSO_200M_050219_2,8098 HBL1_DMSO_200M_050219_2,8098,VMINKATPY True True VMINKATPY 43.843498 518.778735339642 109817936.0 8097.0 ENSG00000170906|ENST00000485876|NDUFA3 4.882335186004639 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8099 43.845 19.0 3510500.0 25 0 524710.0 + 31332 RMLPHAPGV 9 71 489.2707683773461 976.5269838214924 2 489.2714111208916 MULTI CID FTMS 0 0 0 8097 3293655.5 0.8222351495234613 2 -0.1099433898925781 2 Unmodified _RMLPHAPGV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 28.486842064014134 0.1687311288560894 4 PHAPR 5 5 34.208 0.0 0.0 3.503 0.0 0.0 400.225389549025 0.0 400.225389549025 0.0 20.28273777167044 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.0 PHAPR 3.503 - 61 1 1.776 53907.2 1.0 3591 4506 8097 HBL1_DMSO_200M_050219_2,8099 HBL1_DMSO_200M_050219_2,8099,RMLPHAPGV False True RMLPHAPGV 43.844675 489.271411120892 90372168.0 8097.0 ENSG00000196591|ENST00000519065|HDAC2;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 6.298631032307942 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8100 43.847 85.0 813510.0 25 0 71632.0 + 3745 DAFVGGHRI 9 97 486.25591218295375 0 486.2565490603447 PEAK CID FTMS 0 0 0 8097 422105.25 0.4994069542233733 -2 0.073974609375 3 Unmodified _DAFVGGHRI_ ENSG00000167972|ENST00000301732|ABCA3 37.97399986684836 0.0716774499419844 4 {M(Oxidation (M))|F}V{I|L} 3 6 22.065 0.0 0.0 2.2736 0.0 0.0 186.06207325839333 422.1909603433144 608.2530336017078 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 {M(Oxidation (M))|F}V{I|L} 2.2736 - 71 + 1 1.776 58703.1 1.0 3592 4506 8097 HBL1_DMSO_200M_050219_2,8100 HBL1_DMSO_200M_050219_2,8100,DAFVGGHRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8101 43.86 800.0 211270.0 25 0 14326.0 + 4606 DAYTKKELI 9 158 540.8001570186357 1079.5857611040713 2 540.8005859255791 MULTI CID FTMS 0 0 0 8097 144093.765625 0.0801737389598982 -3 0.1195106506347656 4 Unmodified _DAYTKKELI_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 107.09958533191995 0.0072323465566536 4 {[DA]|[EG]}YTKKE{I|L}{I|L} 9 0 + 65.292 0.0 0.0 6.0479 6.0479 88.759 0.0 0.0 0.0 1.6593216667414623 32.8200211006023 1.6593216667414623 15.0 0 2.473197507588033 1.5228787452803376 1.281234684152075 0.0 + + {[DA]|[EG]}YTKKE{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DTKKE{I|L}{I|L};[YT]ADKKE{I|L}{I|L};{[DA]|[EG]}[RH]{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}{I|L};[KT]KEYGE{I|L}{I|L};[{M(Oxidation (M))|F}V][RV]KTDC{I|L};{[SA]|[TG]}[YE]KKE{I|L}{I|L};[YT]{[QS]|[NT]}{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}VP[NP]GE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}KK[CS]{M(Oxidation (M))|F}{I|L}{I|L} 6.0479;4.6585;3.5267;3.4858;3.4187;2.731;2.7226;2.4226;2.3825;2.2784 +;-;-;-;-;-;-;-;-;- + 1585 1 1.776 134274.7 0.7400000095367432 3593 4506 8097 HBL1_DMSO_200M_050219_2,8101 HBL1_DMSO_200M_050219_2,8101,DAYTKKELI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8102 43.874 800.0 109270.0 25 0 8894.2 -1 DYWSWQQCHCK 11 134 799.3220215583649 1596.6294901835297 2 799.3231689333916 MULTI CID FTMS 0 0 0 8097 139725.125 1.0 0 0.0 5 2 Carbamidomethyl (C) _DYWSWQQC(Carbamidomethyl (C))HC(Carbamidomethyl (C))K_ ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4 0.3506318815782774 0.8734936314171269 4 {[YC]|[HE]}YYTQQA{M(Oxidation (M))|F}DNS 12 -1 82.914 0.0 0.0 5.193 0.0 0.0 0.0 110.02525507144765 110.02525507144765 26.63263233645928 0.0 0.0 0.0 0 1.0629529932484498 2.0 0.9076960356474644 0.2887254899964357 {[YC]|[HE]}YYTQQA{M(Oxidation (M))|F}DNS 5.193 - 11783 + 1 1.776 63071.8 0.6499999761581421 3594 4506 8097 HBL1_DMSO_200M_050219_2,8102 HBL1_DMSO_200M_050219_2,8102,DYWSWQQCHCK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8103 43.888 800.0 201080.0 25 0 16028.0 + 24416 MFTEKTTTY 9 190 561.2630120643078 1120.5114711954154 2 561.2638427615166 MULTI CID FTMS 0 0 0 8097 131712.28125 0.4583260566647144 -3 0.1195106506347656 6 Unmodified _MFTEKTTTY_ ENSG00000129292|ENST00000395386|PHF20L1 72.96794272382148 0.0199516581995792 4 [VG]TTTTT{M(Oxidation (M))|F}YM 10 6 + 69.269 0.0 0.0 6.1819 6.1819 72.728 0.0 0.0 0.0 17.501225267834002 15.026975159433531 15.026975159433531 0.0831070928538224 0 0.0 2.0 1.9406140654642807 0.0 [VG]TTTTT{M(Oxidation (M))|F}YM;[VG]TTTTTY{M(Oxidation (M))|F}M;[VG]TTTTYT{M(Oxidation (M))|F}M;[VG]TTT{M(Oxidation (M))|F}MAYM;[VG]TTT{M(Oxidation (M))|F}MS{M(Oxidation (M))|F}M;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TTTT{M(Oxidation (M))|F}YM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TTTTY{M(Oxidation (M))|F}M;{[TV]|[{I|L}S]}GTTTT{M(Oxidation (M))|F}YM;{[TV]|[{I|L}S]}GTTTTY{M(Oxidation (M))|F}M;[VG]TT[PS][QA]TEM 6.1819;6.1745;5.784;4.6876;4.6801;4.62;4.6126;4.6048;4.5974;4.5791 -;-;-;-;-;-;-;-;-;- 6387 1 1.776 119059.5 0.7099999785423279 3595 4506 8097 HBL1_DMSO_200M_050219_2,8103 HBL1_DMSO_200M_050219_2,8103,MFTEKTTTY True True MFTEKTTTY 43.888106 561.263842761517 2768788.25 8097.0 ENSG00000129292|ENST00000395386|PHF20L1 7.718810081481934 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8104 43.896 468.0 367320.0 25 0 32816.0 6884 EEELTTTLKV 10 128 388.2131865782912 1161.6177303350737 3 388.2128173708916 MULTI CID FTMS 0 0 0 8097 130937.3828125 0.6398709521158482 7 -0.6019859313964844 7 Unmodified _EEELTTTLKV_ ENSG00000103037|ENST00000219315|SETD6;ENST00000427443.5_1_16:58550827-58552930:+|nuORF;ENST00000463954.1_1_16:58551888-58552930:+|nuORF;nc|ENSG00000103037|Q8TBK2-2|SETD6 17.11289562659939 0.5604042439455784 4 Y[HS]PPHVVKV 10 8 + 39.288 0.0 0.0 3.3821 3.3821 65.933 0.0 0.0 0.0 26.52331380567791 8.859513715790364 8.859513715790364 1.9629464514396844 0 0.5 0.0 0.4247425010840047 0.6307196863200843 Y[HS]PPHVVKV;Y[HS]PPV[HV]KV;Y[HS]PVP[HV]KV;Y[HS]PPV[RP]P{I|L};Y[HS]VPP[HV]KV;YV[HS]PP[HV]KV;Y[HS]PPV[RP]{I|L}P;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPVK[WH]Y;Y[HS]PVP[RP]P{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVPK[WH]Y 3.3821;3.2132;2.2837;2.1371;2.0245;1.8532;1.8203;1.405;1.2076;1.1459 -;-;-;-;-;-;-;-;-;- 331 + 1 1.776 141811.6 1.0 3596 4506 8097 HBL1_DMSO_200M_050219_2,8104 HBL1_DMSO_200M_050219_2,8104,EEELTTTLKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8105 43.901 218.0 370520.0 25 0 50615.0 + 41630 VPPPPPPAM 9 122 451.74475670163486 0 451.7447387576103 PEAK CID FTMS 0 0 0 8097 129253.8203125 0.8471532212376838 -2 0.073974609375 8 Unmodified _VPPPPPPAM_ ENSG00000137449|ENST00000538197|CPEB2;nc|ENSG00000137449|Q7Z5Q1-4|CPEB2;nc|ENSG00000137449|Q7Z5Q1-5|CPEB2;nc|ENSG00000137449|Q7Z5Q1-6|CPEB2;nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;nc|ENSG00000137449|Q7Z5Q1|CPEB2 45.7499826716795 0.043292906891918 4 PPM 3 6 11.682 0.0 0.0 1.2959 0.0 0.0 382.2227172844599 191.0830477350219 573.3057650194818 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPM 1.2959 - 109 + 1 1.776 66379.5 1.0 3597 4506 8097 HBL1_DMSO_200M_050219_2,8105 HBL1_DMSO_200M_050219_2,8105,VPPPPPPAM True True VPPPPPPAM 43.900506 451.74473875761 4260533.5 8097.0 nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;;ENSG00000137449|ENST00000538197|CPEB2;;nc|ENSG00000137449|Q7Z5Q1|CPEB2;;nc|ENSG00000137449|Q7Z5Q1-4|CPEB2;;nc|ENSG00000137449|Q7Z5Q1-5|CPEB2;;nc|ENSG00000137449|Q7Z5Q1-6|CPEB2 0.3405531098445256 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8107 43.905 6.2 8434300.0 25 0 774890.0 + 24989 MPPPPPQGV 9 84 460.23852327962805 918.462493626056 2 460.2390930056572 MULTI CID FTMS 0 0 0 8106 9617527.0 0.5189673606465255 49 -4.318527221679688 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 59.79521254764295 0.0261954583213598 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 43.677 0.0 0.0 4.7555 4.7555 81.77 0.0 0.0 0.0 7.034021960761265 18.2711470149615 7.034021960761265 10.044321917401078 0 1.1237125054200234 0.0 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{[HG]|PP}NNPPQR;[VG][EP]HPQR;{[HG]|PP}GGNPPQR;{[HG]|PP}NGGPPQR;{[HG]|PP}GGGGPPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR 4.7555;3.6619;3.2593;2.6534;2.6534;1.6509;1.5967;1.5488 -;-;-;-;-;-;-;- 188 1 1.776 47839.3 1.0 3598 4507 8106 HBL1_DMSO_200M_050219_2,8107 HBL1_DMSO_200M_050219_2,8107,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8108 43.906 14.0 3854600.0 25 0 950200.0 + 21238 LPDKGQKLI 9 76 337.8781051567177 1010.6124860703532 3 337.8779785037041 MULTI CID FTMS 0 0 0 8106 3877052.5 0.8385614745158736 3 -0.2893295288085937 2 Unmodified _LPDKGQKLI_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 27.628801355627647 0.1796483985696185 4 [DP]KGQK{I|L} 7 2 40.538 0.0 0.0 4.0112 0.0 0.0 0.0 241.15599598465204 241.15599598465204 -1.5234013280145575 0.0 -1.5234013280145575 0.0 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.0 + [DP]KGQK{I|L} 4.0112 + + 185 1 1.776 56477.9 1.0 3599 4507 8106 HBL1_DMSO_200M_050219_2,8108 HBL1_DMSO_200M_050219_2,8108,LPDKGQKLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8109 43.907 55.0 921890.0 25 0 129340.0 + 43663 YARPSSEVI 9 58 511.26898500022224 1020.5234170672444 2 511.2692748904228 MULTI CID FTMS 0 0 0 8106 1270945.75 0.6468513953259047 3 -0.2893295288085937 3 Unmodified _YARPSSEVI_ ENSG00000066044|ENST00000407627|ELAVL1;nc|ENSG00000066044|Q15717-2|ELAVL1 37.97399986684836 0.0865783450051559 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[RD]EV 7 4 45.507 0.0 0.0 4.4591 0.0 0.0 0.0 128.07003237368625 128.07003237368625 30.02197890818877 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.805462187404089 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[RD]EV 4.4591 - 104 1 1.776 46280.6 1.0 3600 4507 8106 HBL1_DMSO_200M_050219_2,8109 HBL1_DMSO_200M_050219_2,8109,YARPSSEVI True True YARPSSEVI 43.907489 511.269274890423 27087564.0 8106.0 nc|ENSG00000066044|Q15717-2|ELAVL1;;ELAVL1|p.T90P|1|0.43|ENSG00000066044|chr19:7981091-7981091|T/G|missense_variant;;ENSG00000066044|ENST00000407627|ELAVL1 4.9802859624226885 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8110 43.909 48.0 739420.0 25 0 99307.0 + -1 YSYMRDYYDRQ 11 66 788.3310221105246 1574.647491287849 2 788.3320190310478 MULTI CID FTMS 0 0 0 8106 1052054.625 0.8282348266273512 1 -0.0485382080078125 4 Oxidation (M) _YSYM(Oxidation (M))RDYYDRQ_ REV__ENSG00000092199|ENST00000553300|HNRNPC;REV__ENST00000556181.1_1_14:58988169-58988316:+|nuORF;REV__nc|ENSG00000092199|P07910-3|HNRNPC;REV__nc|ENSG00000092199|P07910-4|HNRNPC;REV__nc|ENSG00000092199|P07910|HNRNPC 1.3295316138638542 0.8688751186870782 4 {[CP]|[EA]}[DN]YTQQA 9 -1 17.209 0.0 0.0 1.0929 0.0 0.0 0.0 551.2120414189616 551.2120414189616 3.883221270165437 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.4247425010840047 {[CP]|[EA]}[DN]YTQQA 1.0929 - 322 1 1.776 33719.5 1.0 3601 4507 8106 HBL1_DMSO_200M_050219_2,8110 HBL1_DMSO_200M_050219_2,8110,YSYMRDYYDRQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8111 43.91 65.0 1216300.0 25 0 126860.0 + 43228 WAPIRDGASI 10 81 362.5294940101128 1084.5666526305386 3 362.5293456912041 MULTI CID FTMS 0 0 0 8106 1012430.4375 0.3344152961991792 20 -1.8150520324707031 5 Unmodified _WAPIRDGASI_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 29.081581746732265 0.3152867722954398 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 5 -1 51.867 0.0 0.0 4.7823 0.0 0.0 0.0 485.2483004205688 485.2483004205688 35.69599075987611 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 1.1421590589602533 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PE 4.7823 - 216 + 1 1.776 72264.2 1.0 3602 4507 8106 HBL1_DMSO_200M_050219_2,8111 HBL1_DMSO_200M_050219_2,8111,WAPIRDGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8112 43.912 79.0 864180.0 25 0 137300.0 + 38977 TVPVKIDKV 9 92 333.54625277282946 997.6169289186884 3 333.5462219119072 MULTI CID FTMS 0 0 0 8106 528470.125 0.6346586284038551 3 -0.2893295288085937 6 Unmodified _TVPVKIDKV_ ENSG00000167881|ENST00000307877|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;nc|ENSG00000167881|Q9UHB9-4|SRP68 28.23362336080872 0.1719529537093671 4 {[TV]|[{I|L}S]}VPK{I|L}DKV 9 2 + 65.728 0.0 0.0 6.5885 6.5885 86.685 0.0 0.0 0.0 42.803039116161656 9.041068762088996 9.041068762088996 9.018637558036673 0 0.3494850021680094 2.0 1.2302046884880935 0.0 {[TV]|[{I|L}S]}VPK{I|L}DKV;{[TV]|[{I|L}S]}PVK{I|L}DKV;{[TV]|[{I|L}S]}V[{I|L}T]K{I|L}[QP];{[TV]|[{I|L}S]}[{I|L}T]VK{I|L}[QP];{[TV]|[{I|L}S]}[{I|L}T]KV{I|L}[QP] 6.5885;5.6845;4.018;3.2905;2.8122 -;+;-;-;- + 305 + 1 1.776 62303.4 1.0 3603 4507 8106 HBL1_DMSO_200M_050219_2,8112 HBL1_DMSO_200M_050219_2,8112,TVPVKIDKV False True TVPVKIDKV 43.912158 333.546221911907 13295030.25 8106.0 nc|ENSG00000167881|Q9UHB9-4|SRP68;;ENSG00000167881|ENST00000307877|SRP68;;nc|ENSG00000167881|Q9UHB9-2|SRP68 6.3257598876953125 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8113 43.925 719.0 330250.0 25 0 40285.0 + 8940 FAMNDESVFY 10 144 611.7595783278656 1221.504603722531 2 611.7601806521416 MULTI CID FTMS 0 0 0 8106 298762.75 0.1181226398719941 -3 0.1353797912597656 7 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 32.30548876998284 0.2428506522065767 4 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 109.87 0.0 0.0 8.9946 8.9946 92.425 0.0 0.0 0.0 12.977301291514422 77.09421108581924 12.977301291514422 9.164539485499247 0 1.325257498915995 0.721246399047171 1.646591250700361 1.4802046884880935 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[AG]AEHDQNA{M(Oxidation (M))|F}Y;[QA]EHDQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQAEDH{M(Oxidation (M))|F}Y 8.9946;8.2443;8.2443;8.2443;7.497;7.497;7.2307;6.4362;5.9152;5.8554 -;-;-;-;-;-;-;-;-;- 3221 1 1.776 172318.7 1.0 3604 4507 8106 HBL1_DMSO_200M_050219_2,8113 HBL1_DMSO_200M_050219_2,8113,FAMNDESVFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8114 43.932 418.0 404840.0 25 0 83956.0 -1 0 142 503.3069510401497 502.29967457354974 1 503.3074523806572 MULTI CID FTMS 0 0 0 8106 224475.390625 1.0 0 0.0 8 4 {M(Oxidation (M))|F} 1 -1 11.594 0.0 0.0 2.3081 0.0 0.0 337.22026585948566 0.0 337.22026585948566 0.0 1.4127329498498398 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.3081 - 49 + 1 1.776 130374.1 1.0 3605 4507 8106 HBL1_DMSO_200M_050219_2,8114 HBL1_DMSO_200M_050219_2,8114, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8115 43.941 518.0 257720.0 25 0 46208.0 + 3067 AVLRGIQKV 9 140 492.32109924020097 982.627645547202 2 492.3210327029228 MULTI CID FTMS 0 0 0 8106 128279.828125 0.8940994445631508 1 -0.0485382080078125 9 Unmodified _AVLRGIQKV_ ENSG00000058600|ENST00000299853|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;ENST00000569787.1_1_16:22328322-22336592:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E 46.020951573049366 0.0490941689151868 4 {[VA]|[{I|L}G]}{I|L}R{[VA]|[{I|L}G]}QKV 9 0 + 43.28 0.0 0.0 4.4045 4.4045 75.232 0.0 0.0 0.0 0.0925030130529336 19.91447222211206 0.0925030130529336 6.020599913279618 0 1.218765315847925 1.6989700043360187 0.0 0.0 + + {[VA]|[{I|L}G]}{I|L}R{[VA]|[{I|L}G]}QKV;{[VA]|[{I|L}G]}{I|L}RQ{[VA]|[{I|L}G]}KV;{[VA]|[{I|L}G]}{I|L}RQK{[VA]|[{I|L}G]}V;{[VA]|[{I|L}G]}Q[R{I|L}]{[VA]|[{I|L}G]}KV;{[VA]|[{I|L}G]}Q[R{I|L}]K{[VA]|[{I|L}G]}V;[{I|L}A]VR{[VA]|[{I|L}G]}QKV;{[VA]|[{I|L}G]}RR{[QV]|[N{I|L}]|[RA]|[KV]}RV;[{I|L}A]VRQ{[VA]|[{I|L}G]}KV;{[VA]|[{I|L}G]}RR{[NV]|[RG]}[R{I|L}];[{I|L}A]VRQK{[VA]|[{I|L}G]}V 4.4045;3.7918;3.1849;3.0836;2.4767;2.2723;2.1537;1.6596;1.0665;1.0526 +;-;-;-;-;-;-;-;-;- + 280 1 1.776 107015.3 1.0 3606 4507 8106 HBL1_DMSO_200M_050219_2,8115 HBL1_DMSO_200M_050219_2,8115,AVLRGIQKV True True AVLRGIQKV 43.94121 492.321032702923 1156278.5 8106.0 nc|ENSG00000058600|Q9NVU0-3|POLR3E;;ENSG00000058600|ENST00000299853|POLR3E;;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;;ENST00000569787.1_1_16:22328322-22336592:+|nuORF;;nc|ENSG00000058600|Q9NVU0-5|POLR3E;;nc|ENSG00000058600|Q9NVU0-4|POLR3E;;nc|ENSG00000058600|Q9NVU0-2|POLR3E 2.972882390022278 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8116 43.949 440.0 191380.0 25 0 20554.0 + 16355 IYNEVNQTY 9 114 572.269084883696 1142.523616834192 2 572.2700073122978 MULTI CID FTMS 0 0 0 8106 126089.15625 0.154921678191186 7 -0.5689506530761719 10 Unmodified _IYNEVNQTY_ ENSG00000169371|ENST00000308588|SNUPN 15.847184025352805 0.4077185912009129 4 VVQD 4 7 24.437 0.0 0.0 2.1389 0.0 0.0 0.0 698.2764909399137 698.2764909399137 9.832881222565248 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 VVQD 2.1389 - 346 1 1.776 70011.6 1.0 3607 4507 8106 HBL1_DMSO_200M_050219_2,8116 HBL1_DMSO_200M_050219_2,8116,IYNEVNQTY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8118 43.953 4.0 9163300.0 25 0 1322000.0 + -1 TFQQNASSM 9 65 507.713161538349 1013.411770143498 2 507.7139160037041 MULTI CID FTMS 0 0 0 8117 14624513.0 1.0 0 0.0 1 Oxidation (M) _AM(Oxidation (M))SQDTKSM_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 18.13498045792455 0.3457906370836843 4 [AG][C(Carbamidomethyl (C))H]{[HG]|PP}ASSM 10 -1 [AG][C(Carbamidomethyl (C))H]{[HG]|PP}A + + 29.397 0.80086 0.11602 2.9008 2.9008 45.715 0.0 0.0 0.0 0.0 5.19566314150752 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.0 [AG][C(Carbamidomethyl (C))H]{[HG]|PP}ASSM 2.9008 - 102 + 1 1.77 34136.3 1.0 3608 4508 8117 HBL1_DMSO_200M_050219_2,8118 HBL1_DMSO_200M_050219_2,8118,AMSQDTKSM False False TFQQNASSM 43.953439 507.713916003704 0.0 8117.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 0.2943079670270284 2.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 8119 43.955 11.0 3438400.0 25 0 318830.0 + 41637 VPPPSAQEI 9 76 469.2527500155162 936.4909470978324 2 469.2531921267509 MULTI CID FTMS 0 0 0 8117 4578284.5 0.8313637640533601 1 -0.1149215698242187 2 Unmodified _VPPPSAQEI_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 39.957323273325 0.0756908302845263 4 [VP]P[PS]AQE{I|L} 9 0 + 44.811 0.0 0.0 4.785 4.785 68.795 0.0 0.0 0.0 11.319459175083608 15.374015516889372 11.319459175083608 1.0340874929963917 0 0.8182503180159344 1.3979400086720375 0.6505149978319906 0.0 + + [VP]P[PS]AQE{I|L};[VP]P{[SA]|[TG]}PQE{I|L};[VP]P[PS]A[AG]E{I|L};[VP]P{[SA]|[TG]}P[AG]E{I|L};[VP]P[PS][DN]V{I|L};{[QN]|[E{I|L}]|[KN]}[HT]EPV{I|L};{[QN]|[E{I|L}]|[KN]}[HT]PVE{I|L};{[QN]|[E{I|L}]|[KN]}[HT]PEV{I|L} 4.785;4.6746;3.8017;3.6913;2.2474;1.2874;1.154;0.64452 +;-;-;-;-;-;-;- + 213 1 1.77 35331.7 1.0 3609 4508 8117 HBL1_DMSO_200M_050219_2,8119 HBL1_DMSO_200M_050219_2,8119,VPPPSAQEI True True VPPPSAQEI 43.954618 469.253192126751 149509568.0 8117.0 nc|ENSG00000051108|Q15011-4|HERPUD1;;nc|ENSG00000051108|Q15011-2|HERPUD1;;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;;ENSG00000051108|ENST00000439977|HERPUD1 5.621280352274577 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8120 43.956 41.0 1572400.0 25 0 133810.0 25182 MSQDYYDM 8 86 526.6864337513844 1051.3583145695686 2 526.6871215701103 MULTI CID FTMS 0 0 0 8117 1233354.125 1.0 0 0.0 3 Unmodified _MSQDYYDM_ ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;nc|ENSG00000100722|Q6PJT7-9|ZC3H14 10.823927491677226 0.7510103885582552 4 MS 2 6 23.271 0.0 0.0 2.2134 0.0 0.0 0.0 830.2654472746148 830.2654472746148 6.25951216083255 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + MS 2.2134 + + 136 + 1 1.77 53883.6 1.0 3610 4508 8117 HBL1_DMSO_200M_050219_2,8120 HBL1_DMSO_200M_050219_2,8120,MSQDYYDM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8121 43.958 85.0 761560.0 25 0 91645.0 -1 TAILCGTL 8 89 424.73176197114987 847.4489710090998 2 424.7314636111259 MULTI CID FTMS 0 0 0 8117 765096.8125 0.8518839841859122 1 -0.1149215698242187 4 Carbamidomethyl (C) _TAILC(Carbamidomethyl (C))GTL_ ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF 19.438996006549623 0.6237395211498085 4 [TA]PSTMK{I|L} 8 -1 + 53.141 0.0 0.0 6.2707 6.2707 88.598 0.0 0.0 0.0 10.162703231326269 12.184290373512034 10.162703231326269 11.933115814076343 0 0.4247425010840047 2.0 0.0 0.0 [TA]PSTMK{I|L};[TA]{I|L}[DG]MK{I|L};[TA]{[RE]|[WV]}MK{I|L};[TA]{I|L}[Q{I|L}][CS]{I|L};[PS]P[{I|L}P]SP[PG];{[SA]|[TG]}Y[Q{I|L}]{I|L}[PG];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[R{M(Oxidation (M))|F}]{I|L}[PG] 6.2707;4.8625;4.0122;3.6938;2.2561;1.9656;0.99977 -;-;-;-;-;-;- 125 + 1 1.77 53188.1 1.0 3611 4508 8117 HBL1_DMSO_200M_050219_2,8121 HBL1_DMSO_200M_050219_2,8121,TAILCGTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8122 43.96 124.0 590410.0 25 0 65183.0 41450 VPLMCHLF 8 78 480.2439781549132 958.4734033766264 2 480.2447387576103 MULTI CID FTMS 0 0 0 8117 413887.59375 0.7784424665413344 3 -0.327362060546875 5 Unmodified _VPLMCHLF_ ENST00000303545.3_1_8:125499025-125499136:+|nuORF 17.086550045450526 0.6584923310065985 4 VPP 3 6 50.445 0.0 0.0 5.2631 0.0 0.0 0.0 662.2781985070853 662.2781985070853 37.97106248532352 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VPP 5.2631 - 71 + 1 1.77 64186.1 1.0 3612 4508 8117 HBL1_DMSO_200M_050219_2,8122 HBL1_DMSO_200M_050219_2,8122,VPLMCHLF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8123 43.963 113.0 568760.0 25 0 61172.0 + 3222 AWPEKRGEI 9 87 543.2904189954048 1084.5662850576095 2 543.2902099490166 MULTI CID FTMS 0 0 0 8117 393055.375 0.295956239283804 20 -1.8436508178710933 6 Unmodified _AWPEKRGEI_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 13.90604991867851 0.4602628045680013 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE 4 5 37.435 0.0 0.0 3.4516 0.0 0.0 0.0 598.3329395774406 598.3329395774406 16.220230592096243 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE 3.4516 + + 101 + 1 1.77 57201.6 1.0 3613 4508 8117 HBL1_DMSO_200M_050219_2,8123 HBL1_DMSO_200M_050219_2,8123,AWPEKRGEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8124 43.974 626.0 145220.0 25 0 23988.0 + -1 IYPTAPPRSY 10 100 583.2621525119371 582.254876045337 1 583.2624389529228 MULTI CID FTMS 0 0 0 8117 367726.1875 1.0 0 0.0 7 ENSG00000143353|ENST00000366928|LYPLAL1 4 [TP]K 3 -1 13.308 0.0 0.0 2.2857 0.0 0.0 0.0 253.0379930709808 253.0379930709808 1.3187534394046914 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.2396518287104437 0.0 [TP]K 2.2857 - 22 1 1.77 71861.9 1.0 3614 4508 8117 HBL1_DMSO_200M_050219_2,8124 HBL1_DMSO_200M_050219_2,8124, False False IYPTAPPRSY 43.973558 583.262438952923 1266471.5 8117.0 ENSG00000143353|ENST00000366928|LYPLAL1 4.344076792399089 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8125 43.987 800.0 140050.0 25 0 11750.0 + 1002 AFYEHAQTY 9 129 565.2507094118407 1128.486865890481 2 565.2507812380791 MULTI CID FTMS 0 0 0 8117 179470.21875 0.3477982636391004 4 -0.4078750610351562 8 Unmodified _AFYEHAQTY_ ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11 71.92227651296345 0.0203558744033348 4 [HV]YTQA{M(Oxidation (M))|F}TY 9 5 + 59.051 0.0 0.0 5.2328 5.2328 82.474 0.0 0.0 0.0 28.47032539791456 14.09256854528806 14.09256854528806 9.208187539523747 0 0.7614393726401688 0.0 0.7614393726401688 0.0 [HV]YTQA{M(Oxidation (M))|F}TY;[HV]YT[AG]A{M(Oxidation (M))|F}TY;[HV]{[CA]|SS}A{M(Oxidation (M))|F}A{M(Oxidation (M))|F}TY;[QA][PG]GA{M(Oxidation (M))|F}A{M(Oxidation (M))|F}TY;[QA][NP]A{M(Oxidation (M))|F}A{M(Oxidation (M))|F}TY;{[MS]|[{M(Oxidation (M))|F}A]}[QA][NP]A{M(Oxidation (M))|F}TY;[HV]YT{M(Oxidation (M))|F}AQTY;[QA][PG]{M(Oxidation (M))|F}QA{M(Oxidation (M))|F}TY;{[MS]|[{M(Oxidation (M))|F}A]}YEHAQTY;{[YC]|[HE]}YA{M(Oxidation (M))|F}AGATY 5.2328;4.4168;4.1358;3.9533;3.9041;3.8148;3.6012;3.581;3.5532;3.4322 -;-;-;-;-;-;-;-;+;- + 1721 + 1 1.77 88542.7 0.8700000047683716 3615 4508 8117 HBL1_DMSO_200M_050219_2,8125 HBL1_DMSO_200M_050219_2,8125,AFYEHAQTY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8126 43.992 276.0 308840.0 25 0 35406.0 27791 PLPPPPPPP 9 91 454.7654400354143 907.5163271376288 2 454.7654296755791 MULTI CID FTMS 0 0 0 8117 161324.0 0.718912605913505 9 -0.8081016540527344 9 Unmodified _PLPPPPPPP_ ENSG00000009694|ENST00000371130|TENM1;ENSG00000100312|ENST00000216139|ACR;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000117560|ENST00000367721|FASLG;ENSG00000124496|ENST00000695948|TRERF1;ENSG00000126460|ENST00000246794|PRRG2;ENSG00000132510|ENST00000448097|KDM6B;ENSG00000138771|ENST00000296043|SHROOM3;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000141456|ENST00000572293|PELP1;ENSG00000146083|ENST00000274811|RNF44;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000160685|ENST00000535420|ZBTB7B;ENSG00000170234|ENST00000307063|PWWP2A;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000175073|ENST00000310421|VCPIP1;ENSG00000175785|ENST00000393140|PRIMA1;ENSG00000176182|ENST00000322217|MYPOP;ENSG00000188779|ENST00000380035|SKOR1;ENSG00000204334|ENST00000697325|ERICH2;ENSG00000248905|ENST00000616417|FMN1;ENSG00000259956|ENST00000563281|RBM15B;ENST00000361272.8_2_8:17102747-17104366:-|nuORF;ENST00000379565.7_1_X:20227482-20284914:-|nuORF;ENST00000508096.1_1_10:126605730-126631034:+|nuORF;ENST00000508478.1_1_5:175957081-175957609:-|nuORF;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENST00000596700.5_1_19:50084718-50093643:+|nuORF;ENST00000597121.5_1_19:50086773-50093643:+|nuORF;nc|ENSG00000009694|Q9UKZ4-2|TENM1;nc|ENSG00000110076|P58401|NRXN2;nc|ENSG00000117560|P48023-2|FASLG;nc|ENSG00000124496|Q96PN7|TRERF1;nc|ENSG00000132510|O15054-1|KDM6B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000146083|Q7L0R7-2|RNF44;nc|ENSG00000160685|O15156-2|ZBTB7B;nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170234|Q96N64-2|PWWP2A;nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000175785|Q86XR5-2|PRIMA1;nc|ENSG00000188779|P84550-3|SKOR1;nc|ENSG00000248905|Q68DA7-5|FMN1;REV__ENSG00000048991|ENST00000683871|R3HDM1;REV__ENSG00000066855|ENST00000262146|MTFR1;REV__ENSG00000068489|ENST00000262293|PRR11;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000100592|ENST00000360909|DAAM1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000119596|ENST00000325680|YLPM1;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000125740|ENST00000353609|FOSB;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__ENSG00000132510|ENST00000448097|KDM6B;REV__ENSG00000135250|ENST00000393651|SRPK2;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138081|ENST00000403359|FBXO11;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__ENSG00000141431|ENST00000269197|ASXL3;REV__ENSG00000145414|ENST00000274054|NAF1;REV__ENSG00000146122|ENST00000274867|DAAM2;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152409|ENST00000396137|JMY;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000157827|ENST00000288670|FMNL2;REV__ENSG00000162775|ENST00000369784|RBM15;REV__ENSG00000164916|ENST00000328914|FOXK1;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000173166|ENST00000319170|RAPH1;REV__ENSG00000173917|ENST00000330070|HOXB2;REV__ENSG00000175073|ENST00000310421|VCPIP1;REV__ENSG00000176624|ENST00000406189|MEX3C;REV__ENSG00000186472|ENST00000333891|PCLO;REV__ENSG00000187017|ENST00000645284|ESPN;REV__ENSG00000187164|ENST00000355371|SHTN1;REV__ENSG00000203485|ENST00000392634|INF2;REV__ENSG00000215045|ENST00000457091|GRID2IP;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000274209|ENST00000620264|ANTXRL;REV__ENST00000324225.8_1_11:117049861-117050083:+|nuORF;REV__ENST00000358635.7_1_4:140005384-140005639:-|nuORF;REV__ENST00000368219.1_1_1:156698226-156698472:-|nuORF;REV__ENST00000379565.7_1_X:20227482-20284914:-|nuORF;REV__ENST00000424808.6_1_8:66582187-66620357:+|nuORF;REV__ENST00000471339.1_1_5:173036657-173043649:-|nuORF;REV__ENST00000519935.1_1_7:27209203-27211037:+|nuORF;REV__ENST00000587358.1_1_19:45974364-45976267:+|nuORF;REV__nc|ENSG00000048991|Q15032-2|R3HDM1;REV__nc|ENSG00000048991|Q15032-3|R3HDM1;REV__nc|ENSG00000048991|Q15032-4|R3HDM1;REV__nc|ENSG00000048991|Q15032|R3HDM1;REV__nc|ENSG00000066855|Q15390-2|MTFR1;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100592|Q9Y4D1-3|DAAM1;REV__nc|ENSG00000100592|Q9Y4D1|DAAM1;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000119596|P49750-1|YLPM1;REV__nc|ENSG00000119596|P49750-3|YLPM1;REV__nc|ENSG00000125740|P53539-10|FOSB;REV__nc|ENSG00000125740|P53539-2|FOSB;REV__nc|ENSG00000125740|P53539-3|FOSB;REV__nc|ENSG00000125740|P53539-5|FOSB;REV__nc|ENSG00000125740|P53539-8|FOSB;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1;REV__nc|ENSG00000132510|O15054-1|KDM6B;REV__nc|ENSG00000135250|P78362|SRPK2;REV__nc|ENSG00000138081|Q86XK2-4|FBXO11;REV__nc|ENSG00000138081|Q86XK2-5|FBXO11;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3;REV__nc|ENSG00000140836|Q15911-2|ZFHX3;REV__nc|ENSG00000146122|Q86T65-4|DAAM2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000157827|Q96PY5|FMNL2;REV__nc|ENSG00000162775|Q96T37-2|RBM15;REV__nc|ENSG00000162775|Q96T37-3|RBM15;REV__nc|ENSG00000162775|Q96T37-4|RBM15;REV__nc|ENSG00000170004|Q12873-3|CHD3;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__nc|ENSG00000187017|B1AK53-2|ESPN;REV__nc|ENSG00000187164|A0MZ66-2|SHTN1;REV__nc|ENSG00000187164|A0MZ66-3|SHTN1;REV__nc|ENSG00000187164|A0MZ66-4|SHTN1;REV__nc|ENSG00000187164|A0MZ66-5|SHTN1;REV__nc|ENSG00000187164|A0MZ66-6|SHTN1;REV__nc|ENSG00000187164|A0MZ66-8|SHTN1;REV__nc|ENSG00000203485|Q27J81-2|INF2;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__PCLO|p.V3720Sfs*2|1|0.13|ENSG00000186472|chr7:82916828-82916829|-/T|frameshift_variant 56.04830969593885 0.0282699710924866 4 [{I|L}P]PPPP[YK] 8 3 + 41.538 0.0 0.0 4.5771 4.5771 82.445 0.0 0.0 0.0 15.228787452803378 6.989700043360188 6.989700043360188 14.19637752350454 0 1.16944517631652 1.5228787452803376 0.0 0.0 [{I|L}P]PPPP[YK];[{I|L}P][YK]P[YK];{[HG]|PP}{I|L}PPP[YK];{[HG]|PP}P{I|L}PP[YK];[YK]{I|L}PP[YK];[{I|L}P]P[YK][YK];{[HG]|PP}PP{I|L}P[YK];[YK]P{I|L}P[YK];{[HG]|PP}{I|L}[YK][YK] 4.5771;3.0127;2.899;2.899;2.8561;2.5006;2.3922;2.3493;0.82248 -;-;-;-;-;-;-;-;- 132 1 1.77 70617.1 1.0 3616 4508 8117 HBL1_DMSO_200M_050219_2,8126 HBL1_DMSO_200M_050219_2,8126,PLPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8127 44.004 639.0 502660.0 25 0 30745.0 + 3744 DAFVGGHRI 9 268 324.5068642185719 970.4987632559156 3 324.5066711306572 MULTI CID FTMS 0 0 0 8117 134102.609375 1.0 0 0.0 10 Unmodified _DAFVGGHRI_ ENSG00000167972|ENST00000301732|ABCA3 26.88365393820708 0.1891292719743517 4 NV[WE] 4 8 16.114 0.0 0.0 1.6604 0.0 0.0 424.2556324689469 0.0 424.2556324689469 0.0 1.510234424404686 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 NV[WE] 1.6604 - 162 1 1.77 253909.9 1.0 3617 4508 8117 HBL1_DMSO_200M_050219_2,8127 HBL1_DMSO_200M_050219_2,8127,DAFVGGHRI False True DAFVGGHRI 44.00362 324.506671130657 11081210.0625 8117.0 ENSG00000167972|ENST00000301732|ABCA3 4.713518857955933 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8128 44.013 512.0 281260.0 25 0 66564.0 + -1 GLMKKLHT 8 138 472.2725990633161 0 472.2726623415947 PEAK CID FTMS 0 0 0 8117 131529.96875 1.0 0 0.0 11 Oxidation (M) _GLM(Oxidation (M))KKLHT_ REV__ENSG00000121964|ENST00000682281|GTDC1;REV__ENST00000491448.5_1_2:144764747-144969145:-|nuORF;REV__nc|ENSG00000121964|Q4AE62-2|GTDC1;REV__nc|ENSG00000121964|Q4AE62-3|GTDC1;REV__nc|ENSG00000121964|Q4AE62-4|GTDC1;REV__nc|ENSG00000121964|Q4AE62-5|GTDC1;REV__nc|ENSG00000121964|Q4AE62-6|GTDC1 10.183394434864962 0.5394990767616434 4 M 1 -1 6.9897 0.0 0.0 0.74159 0.0 0.0 742.4317510057354 66.03574548892811 808.4674964946635 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.74159 + + 121 + 1 1.77 115243.9 1.0 3618 4508 8117 HBL1_DMSO_200M_050219_2,8128 HBL1_DMSO_200M_050219_2,8128,GLMKKLHT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8129 44.028 800.0 190200.0 25 0 10854.0 1095 AGLSHTEVL 9 166 463.7503539934432 925.4861550536864 2 463.7502929568291 MULTI CID FTMS 0 0 0 8117 133087.359375 0.0186238754557318 15 -1.401409149169922 12 Unmodified _AGLSHTEVL_ ENSG00000113194|ENST00000261942|FAF2 23.1484247019978 0.2366544122328345 4 [{I|L}P][WD]{I|L}PSV 8 8 [{I|L}P][WD]{I|L} + + 22.825 1.707 0.27341 2.4662 2.4662 45.055 0.0 0.0 0.0 0.0 4.491096760230647 0.0 0.0 0 0.3494850021680094 0.0 0.3668114052518756 0.0 [{I|L}P][WD]{I|L}PSV 2.4662 - 373 + 1 1.77 123487.9 0.6700000166893005 3619 4508 8117 HBL1_DMSO_200M_050219_2,8129 HBL1_DMSO_200M_050219_2,8129,AGLSHTEVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8130 44.035 417.0 321640.0 25 0 15841.0 + 39556 VAYQREPQI 9 150 552.2957547233497 1102.5769565134992 2 552.2952758669853 MULTI CID FTMS 0 0 0 8117 114507.828125 0.1001826814576939 -7 0.3069076538085937 13 Unmodified _VAYQREPQI_ ENSG00000165271|ENST00000297990|NOL6;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6 110.6747026088012 0.0053351249510064 4 VAYQWVPQ{I|L} 9 2 + 78.979 0.0 0.0 7.1631 7.1631 89.865 0.0 0.0 0.0 25.239976964633208 14.134901114970075 14.134901114970075 9.208187539523747 0 1.5635751933493736 1.6989700043360187 0.0 1.8441876774005248 VAYQWVPQ{I|L};VAY[AG]WVPQ{I|L};VAYQWV[Q{I|L}]P;VAW{I|L}WRC(Carbamidomethyl (C)){I|L};VAW{I|L}WRGC{I|L};VAYQWVP[AG]{I|L};VAYQ[VP]WQ{I|L};VA[VS]VAERC(Carbamidomethyl (C)){I|L};VAYQWVPAAV;VA[VS]VAERGC{I|L} 7.1631;6.328;5.8812;5.6647;5.5465;5.5444;5.4609;5.2048;5.1856;5.0954 -;-;-;-;-;-;-;-;-;- 3190 + 1 1.77 107711.6 1.0 3620 4508 8117 HBL1_DMSO_200M_050219_2,8130 HBL1_DMSO_200M_050219_2,8130,VAYQREPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8131 44.049 800.0 126270.0 25 0 17759.0 -1 0 85 1033.3938139421386 2064.773074951077 2 1033.894457995892 MULTI CID FTMS 0 0 0 8117 108716.96875 1.0 0 0.0 14 4 QQDA{M(Oxidation (M))|F}TSS 8 -1 50.498 0.0 0.0 2.4457 0.0 0.0 0.0 1197.3877959806275 1197.3877959806275 32.763808234059375 0.0 0.0 0.0 0 0.0 0.0 1.4698565171985376 1.774227503252014 QQDA{M(Oxidation (M))|F}TSS 2.4457 - 1355 1 1.77 74235.5 0.449999988079071 3621 4508 8117 HBL1_DMSO_200M_050219_2,8131 HBL1_DMSO_200M_050219_2,8131, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8132 44.064 800.0 124940.0 25 0 7405.6 + 43167 VYQVQTGSEY 10 121 587.2745125412558 1172.5344721493116 2 587.2750732302666 MULTI CID FTMS 0 0 0 8117 110059.0625 1.0 0 0.0 15 Unmodified _VYQVQTGSEY_ ENSG00000139436|ENST00000355312|GIT2;nc|ENSG00000139436|Q14161-10|GIT2;nc|ENSG00000139436|Q14161-3|GIT2;nc|ENSG00000139436|Q14161-4|GIT2;nc|ENSG00000139436|Q14161-5|GIT2;nc|ENSG00000139436|Q14161-8|GIT2;nc|ENSG00000139436|Q14161-9|GIT2 7.289230182591677 0.6929195370588109 4 [YV]QQ[HD]{I|L}Y 8 5 22.017 0.0 0.0 1.8777 0.0 0.0 0.0 123.02700079604908 123.02700079604908 6.532213332593457 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YV]QQ[HD]{I|L}Y 1.8777 - 351 1 1.77 79815.0 0.6299999952316284 3622 4508 8117 HBL1_DMSO_200M_050219_2,8132 HBL1_DMSO_200M_050219_2,8132,VYQVQTGSEY False True VYQVQTGSEY 44.063945 587.275073230267 707313.3125 8117.0 nc|ENSG00000139436|Q14161-3|GIT2;;nc|ENSG00000139436|Q14161-5|GIT2;;nc|ENSG00000139436|Q14161-8|GIT2;;nc|ENSG00000139436|Q14161-10|GIT2;;nc|ENSG00000139436|Q14161-9|GIT2;;nc|ENSG00000139436|Q14161-4|GIT2;;ENSG00000139436|ENST00000355312|GIT2 1.0383620361487071 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8134 44.069 40.0 1451200.0 25 0 111960.0 + 41184 VPDQPHPEI 9 89 516.2609455430522 1030.5073381529044 2 516.2615234255791 MULTI CID FTMS 0 0 0 8133 1388688.0 0.337723242445955 7 -0.5823898315429688 1 Unmodified _VPDQPHPEI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 34.93206674587334 0.1032771302489716 4 VPDQPH 6 3 57.031 0.0 0.0 5.5342 0.0 0.0 0.0 354.1678203872542 354.1678203872542 25.4266155373798 0.0 0.0 0.0 0 1.0138793319624575 1.3979400086720375 0.0 0.3807196863200844 + VPDQPH 5.5342 + + 336 + 1 1.766 50578.2 1.0 3623 4509 8133 HBL1_DMSO_200M_050219_2,8134 HBL1_DMSO_200M_050219_2,8134,VPDQPHPEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8135 44.07 39.0 800630.0 25 0 135050.0 + -1 EDCKNCESFY 10 61 676.2490483240111 1350.4835437148222 2 676.2505370974541 MULTI CID FTMS 0 0 0 8133 880690.8125 0.4719470705865512 2 -0.2124404907226562 2 2 Carbamidomethyl (C) _EDC(Carbamidomethyl (C))KNC(Carbamidomethyl (C))ESFY_ REV__ENSG00000141429|ENST00000269195|GALNT1;REV__nc|ENSG00000141429|Q10472-2|GALNT1 1.844237919475145 0.7181058121064529 4 Y 1 -1 13.099 0.0 0.0 0.96994 0.0 0.0 1169.4090788484143 0.0 1169.4090788484143 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.96994 + + 30 + 1 1.766 28802.0 1.0 3624 4509 8133 HBL1_DMSO_200M_050219_2,8135 HBL1_DMSO_200M_050219_2,8135,EDCKNCESFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8136 44.072 80.0 729240.0 25 0 76631.0 8632 EVEEDEYKAFY 11 81 711.3065774151316 1420.5986018970632 2 711.3083373904228 MULTI CID FTMS 0 0 0 8133 869877.1875 0.0339850285166831 -5 0.2988395690917969 3 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 4 [QA]HDEAQQGGA{M(Oxidation (M))|F}Y 13 9 + 69.845 0.0 0.0 4.9166 4.9166 68.502 0.0 0.0 0.0 0.5833677554122687 10.203682123901558 0.5833677554122687 0.5833677554122687 0 0.8935078169319297 0.0 0.0 1.1237125054200234 [QA]HDEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HS]NQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQNAGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HS]NQNAGA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HS]NQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HS]NQNQA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QGGA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]GGA{M(Oxidation (M))|F}Y 4.9166;4.8755;4.7047;4.6636;4.6609;4.6181;4.449;4.4061;4.2779;4.2779 -;-;-;-;-;-;-;-;-;- 1943 1 1.766 46763.9 1.0 3625 4509 8133 HBL1_DMSO_200M_050219_2,8136 HBL1_DMSO_200M_050219_2,8136,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8137 44.074 95.0 759340.0 25 0 100310.0 -1 ELMTLAHKH 9 96 548.2824597880839 1094.5503666429677 2 548.2829467654228 MULTI CID FTMS 0 0 0 8133 686203.8125 0.5813955003102044 5 -0.4054908752441406 4 Oxidation (M) _ELM(Oxidation (M))TLAHKH_ ENSG00000023734|ENST00000419869|STRAP;nc|ENSG00000023734|Q9Y3F4-2|STRAP 10.823927491677226 0.5436922275383211 4 EHPPEH[HK] 8 -1 44.421 0.0 0.0 4.0584 0.0 0.0 85.08989150215 0.0 85.08989150215 0.0 35.46872086896853 0.0 0.0 0 2.531718309096375 0.0 0.75 0.0 EHPPEH[HK] 4.0584 - 372 1 1.766 63136.4 1.0 3626 4509 8133 HBL1_DMSO_200M_050219_2,8137 HBL1_DMSO_200M_050219_2,8137,ELMTLAHKH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8138 44.076 133.0 1072400.0 25 0 57917.0 -1 HKCGCDFD 8 163 519.6910091783335 1037.367465423467 2 519.6921874880791 MULTI CID FTMS 0 0 0 8133 642773.375 1.0 0 0.0 5 2 Carbamidomethyl (C) _HKC(Carbamidomethyl (C))GC(Carbamidomethyl (C))DFD_ ENSG00000109927|ENST00000392793|TECTA 13.50788311687929 0.7113601687236069 4 GDD[YQ]SM 7 -1 27.533 0.0 0.0 2.6541 0.0 0.0 223.0858014603794 0.0 223.0858014603794 0.0 16.695669435081733 0.0 0.0 0 0.0 0.0 0.5501648626366046 0.6861818737241735 GDD[YQ]SM 2.6541 - 435 + 1 1.766 110483.9 1.0 3627 4509 8133 HBL1_DMSO_200M_050219_2,8138 HBL1_DMSO_200M_050219_2,8138,HKCGCDFD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8139 44.079 97.0 971580.0 25 0 88329.0 + -1 AYVHMVTHF 9 103 374.1794668738054 1119.5165712216162 3 374.1796447634697 MULTI CID FTMS 0 0 0 8133 634959.25 0.8010985216496971 -6 0.3443756103515625 6 Oxidation (M) _AYVHM(Oxidation (M))VTHF_ nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6 31.26834338654808 0.1333407332142048 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}VTH{M(Oxidation (M))|F} 9 -1 + 57.406 0.0 0.0 5.1277 5.1277 84.569 0.0 0.0 0.0 32.21176192622913 10.890625187447966 10.890625187447966 13.699112850717938 0 0.2614393726401688 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}VTH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YH[VS]PH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[YG]VTH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[YR]TH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[NS][VS]PH{M(Oxidation (M))|F};[HV]H[{M(Oxidation (M))|F}E]HVDT;[HV]Y[VS][NS]VDT 5.1277;3.9041;3.7218;3.1431;3.0816;2.9651;1.9444 +;-;-;-;-;-;- + 218 + 1 1.766 80431.1 1.0 3628 4509 8133 HBL1_DMSO_200M_050219_2,8139 HBL1_DMSO_200M_050219_2,8139,AYVHMVTHF False False AYVHMVTHF 44.078513 374.17964476347 25264400.375 8133.0 nc|ENSG00000139644|P55061-2|TMBIM6;;ENSG00000139644|ENST00000267115|TMBIM6 8.049243450164795 3.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8140 44.08 82.0 475900.0 25 0 40996.0 + 38285 TQDGTWRTV 9 67 532.2622778580057 0 532.2623779177666 PEAK CID FTMS 0 0 0 8133 433235.90625 1.0 0 0.0 7 Unmodified _TQDGTWRTV_ ENSG00000170779|ENST00000336219|CDCA4 27.22323531849824 0.1355901598355292 4 DGTW 4 5 25.349 0.0 0.0 2.3858 0.0 0.0 229.1060659956433 371.2059115045532 600.3119775001965 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + DGTW 2.3858 + + 20 + 1 1.766 36151.0 1.0 3629 4509 8133 HBL1_DMSO_200M_050219_2,8140 HBL1_DMSO_200M_050219_2,8140,TQDGTWRTV False True TQDGTWRTV 44.080382 532.262377917767 3205670.0 8133.0 ENSG00000170779|ENST00000336219|CDCA4 6.471793333689372 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8141 44.084 159.0 394320.0 25 0 15435.0 + -1 VMPIQPTI 8 98 457.7560617673461 913.4975706014924 2 457.7567321658134 MULTI CID FTMS 0 0 0 8133 418746.40625 0.9935359551143296 -1 0.1149215698242187 8 Oxidation (M) _VM(Oxidation (M))PIQPTI_ REV__ENSG00000121406|ENST00000376233|ZNF549 24.67388899826682 0.525179942228231 4 [PS]{[QV]|[N{I|L}]|[RA]|[KV]}VGNT{I|L} 9 -1 + 31.794 0.0 0.0 3.4804 3.4804 72.785 0.0 0.0 0.0 0.348561278798968 4.779938523721185 0.348561278798968 6.478174818886377 0 0.4291746928241126 0.7695510786217261 0.1549471895720985 0.3252574989159953 [PS]{[QV]|[N{I|L}]|[RA]|[KV]}VGNT{I|L};[PS]{[QV]|[N{I|L}]|[RA]|[KV]}RNT{I|L};[VP][WK]GNT{I|L};[PS]{[QV]|[N{I|L}]|[RA]|[KV]}VGGGT{I|L};[PS]{[QV]|[N{I|L}]|[RA]|[KV]}RGGT{I|L};[VP][WK]GGGT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NG[H{I|L}]T{I|L};[PG]GV[RN]TT{I|L};[PS]{[QV]|[N{I|L}]|[RA]|[KV]}KN{[QN]|[E{I|L}]|[KN]};[VP]N[RN]TT{I|L} 3.4804;2.7713;2.6675;2.4724;1.7574;1.6535;1.3532;1.1165;1.0468;0.91369 -;-;-;-;-;-;-;-;-;- 706 1 1.766 55277.3 1.0 3630 4509 8133 HBL1_DMSO_200M_050219_2,8141 HBL1_DMSO_200M_050219_2,8141,VMPIQPTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8142 44.087 152.0 342290.0 25 0 36832.0 25995 NLSTINLGIN 10 102 529.7957326593231 1057.576912385446 2 529.7956420779228 MULTI CID FTMS 0 0 0 8133 409250.875 0.4363017759936322 2 -0.2124404907226562 9 Unmodified _NLSTINLGIN_ ENSG00000101916|ENST00000218032|TLR8;nc|ENSG00000101916|Q9NR97-2|TLR8 29.081581746732265 0.3152867722954398 4 {I|L}GN{I|L} 4 7 30.165 0.0 0.0 2.8523 0.0 0.0 642.3332733247024 0.0 642.3332733247024 0.0 17.946537861557985 0.0 0.0 0 0.5 0.0 0.0 0.7742275032520141 {I|L}GN{I|L} 2.8523 - 152 + 1 1.766 45417.5 1.0 3631 4509 8133 HBL1_DMSO_200M_050219_2,8142 HBL1_DMSO_200M_050219_2,8142,NLSTINLGIN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8143 44.09 189.0 422400.0 25 0 70565.0 + 45902 YYSPTKNEI 9 90 557.7746447538134 0 557.7747680544853 PEAK CID FTMS 0 0 0 8133 333445.78125 0.5223585956059914 -1 0.1149215698242187 10 Unmodified _YYSPTKNEI_ ENSG00000117298|ENST00000374893|ECE1;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 53.832793166522166 0.0232989711577274 4 YS{[WT]|[RM]}SPT 7 6 36.744 0.0 0.0 3.2997 0.0 0.0 163.06276499415168 125.07251917056875 288.1352841647204 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.6861818737241735 0.7302046884880937 YS{[WT]|[RM]}SPT 3.2997 - 255 + 1 1.766 64681.4 1.0 3632 4509 8133 HBL1_DMSO_200M_050219_2,8143 HBL1_DMSO_200M_050219_2,8143,YYSPTKNEI True True YYSPTKNEI 44.090197 557.774768054485 36512252.0 8133.0 ENSG00000117298|ENST00000374893|ECE1;;nc|ENSG00000117298|P42892-3|ECE1;;nc|ENSG00000117298|P42892-4|ECE1;;nc|ENSG00000117298|P42892-2|ECE1 6.649641990661621 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8144 44.096 315.0 236090.0 25 0 16751.0 + 40591 VKTSQVAV 8 114 416.2491117541584 830.4836705751169 2 416.2495605349541 MULTI CID FTMS 0 0 0 8133 309119.46875 0.2185935625916697 8 -0.6931800842285156 11 Unmodified _VKTSQVAV_ REV__ENSG00000104823|ENST00000221418|ECH1;REV__ENST00000601333.1_1_19:39306255-39306727:-|nuORF 20.453626601364224 0.6087503291685402 4 VAV 3 -1 23.812 0.0 0.0 2.8673 0.0 0.0 543.2999070026544 0.0 543.2999070026544 0.0 13.354706403678874 0.0 0.0 0 1.0 0.0 0.0 0.0 VAV 2.8673 + + 132 + 1 1.766 63277.0 1.0 3633 4509 8133 HBL1_DMSO_200M_050219_2,8144 HBL1_DMSO_200M_050219_2,8144,VKTSQVAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8145 44.1 191.0 618890.0 25 0 47176.0 -1 TIDPSNPMV 9 130 495.2334217574287 988.4522905816574 2 495.2343627810478 MULTI CID FTMS 0 0 0 8133 288883.8125 0.5369724830327912 18 -1.651592254638672 12 Oxidation (M) _TIDPSNPM(Oxidation (M))V_ ENSG00000198730|ENST00000361367|CTR9 39.957323273325 0.0756908302845263 4 [{I|L}T]{M(Oxidation (M))|F}C 4 -1 32.703 0.0 0.0 3.3085 0.0 0.0 0.0 521.256617324098 521.256617324098 11.53212513775344 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 [{I|L}T]{M(Oxidation (M))|F}C 3.3085 - 297 1 1.766 93558.1 1.0 3634 4509 8133 HBL1_DMSO_200M_050219_2,8145 HBL1_DMSO_200M_050219_2,8145,TIDPSNPMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8146 44.113 800.0 212090.0 25 0 18667.0 + 42938 VVSEVDIAKAD 11 159 573.3054321603806 1144.5963113875612 2 573.3057128787041 MULTI CID FTMS 0 0 0 8133 211968.609375 1.0 0 0.0 13 Unmodified _VVSEVDIAKAD_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 51.76506608216692 0.1078551230621665 4 VVSEVD{I|L}AKAD 11 0 + 87.856 0.0 0.0 7.6757 7.6757 78.564 0.0 0.0 0.0 36.575773191777934 0.5775162877106226 0.5775162877106226 0.5775162877106226 0 0.9361818737241736 2.0 0.0 0.6237125054200234 + + VVSEVD{I|L}AKAD;VVSEVD{I|L}ASQV;VVSEVD{I|L}ASVQ;VVSEVD{I|L}ASN{I|L};VVSEVD{I|L}AS[AG]V;VVSEVD{I|L}ASGG{I|L};VV[WE][W{I|L}]KAD;VV[WE][W{I|L}]SQV;VV[WE][W{I|L}]SVQ;VV[WE][W{I|L}]SN{I|L} 7.6757;7.6252;7.5491;7.5378;6.0432;5.9557;4.207;4.1565;4.0804;4.069 +;-;-;-;-;-;-;-;-;- + 1684 + 1 1.766 133155.1 0.9100000262260436 3635 4509 8133 HBL1_DMSO_200M_050219_2,8146 HBL1_DMSO_200M_050219_2,8146,VVSEVDIAKAD True True VVSEVDIAKAD 44.113422 573.305712878704 1646555.5 8133.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1 6.747082392374675 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8147 44.118 271.0 403980.0 25 0 49645.0 + 14129 IAWERTKTV 9 136 368.5454296907124 1102.614459672337 3 368.8793517947197 MULTI CID FTMS 0 0 0 8133 188500.328125 1.0 0 0.0 14 Unmodified _IAWERTKTV_ ENSG00000058729|ENST00000283109|RIOK2;ENST00000508991.1_1_5:96512756-96518871:-|nuORF;nc|ENSG00000058729|Q9BVS4-2|RIOK2 49.93300154707207 0.0405168250806675 4 {I|L}AW{M(Oxidation (M))|F}A[WK]D 8 5 60.297 0.0 0.0 5.4685 0.0 0.0 0.0 82.06699548892811 82.06699548892811 39.327665712010216 0.0 0.0 0.0 0 0.25 2.0 0.7614393726401688 0.3807196863200844 {I|L}AW{M(Oxidation (M))|F}A[WK]D 5.4685 - 315 + 1 1.766 93145.4 1.0 3636 4509 8133 HBL1_DMSO_200M_050219_2,8147 HBL1_DMSO_200M_050219_2,8147,IAWERTKTV True True IAWERTKTV 44.118411 368.87935179472 1950566.75 8133.0 ENSG00000058729|ENST00000283109|RIOK2;;ENST00000508991.1_1_5:96512756-96518871:-|nuORF;;nc|ENSG00000058729|Q9BVS4-2|RIOK2 3.481527884801229 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8148 44.132 800.0 237270.0 25 0 13368.0 + 14394 IFHEKTSEF 9 173 569.282134763268 1136.549716593336 2 569.2824584841728 MULTI CID FTMS 0 0 0 8133 159259.59375 0.0838673079254834 -3 0.2248649597167968 15 Unmodified _IFHEKTSEF_ ENSG00000003989|ENST00000494857|SLC7A2;nc|ENSG00000003989|P52569-2|SLC7A2;nc|ENSG00000003989|P52569-3|SLC7A2 70.33199760932243 0.0209706178985989 4 {I|L}{M(Oxidation (M))|F}HE 4 5 52.0 0.0 0.0 4.5752 0.0 0.0 0.0 607.2754491586912 607.2754491586912 6.115490839232244 0.0 0.0 0.0 0 1.113982988912431 0.0 1.1307196863200843 0.0 + {I|L}{M(Oxidation (M))|F}HE 4.5752 + + 4558 + 1 1.766 138842.3 0.7799999713897705 3637 4509 8133 HBL1_DMSO_200M_050219_2,8148 HBL1_DMSO_200M_050219_2,8148,IFHEKTSEF True True IFHEKTSEF 44.132242 569.282458484173 54701026.0 8133.0 nc|ENSG00000003989|P52569-3|SLC7A2;;nc|ENSG00000003989|P52569-2|SLC7A2;;ENSG00000003989|ENST00000494857|SLC7A2 6.566572189331055 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8149 44.138 303.0 481400.0 25 0 76854.0 + 14396 IFHEKTSEF 9 140 379.8571889752571 1136.5497375259713 3 379.8570739626884 MULTI CID FTMS 0 0 0 8133 154634.921875 0.0440348300275632 -3 0.2248649597167968 16 Unmodified _IFHEKTSEF_ ENSG00000003989|ENST00000494857|SLC7A2;nc|ENSG00000003989|P52569-2|SLC7A2;nc|ENSG00000003989|P52569-3|SLC7A2 49.93300154707207 0.0405168250806675 4 {[{M(Oxidation (M))|F}H]|[RQ]}EK{[MG]|[TS]}{M(Oxidation (M))|F}E{I|L} 9 3 + 50.868 0.0 0.0 4.4757 4.4757 74.603 0.0 0.0 0.0 2.3261192127829133 15.189097685623524 2.3261192127829133 5.044321917401078 0 0.2614393726401688 1.3010299956639813 1.0 0.6861818737241735 {[{M(Oxidation (M))|F}H]|[RQ]}EK{[MG]|[TS]}{M(Oxidation (M))|F}E{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}EK{[MG]|[TS]}E{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}SG{[MG]|[TS]}{M(Oxidation (M))|F}E{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}EK[WM]{M(Oxidation (M))|F}{I|L};{I|L}{M(Oxidation (M))|F}HS{[SA]|[TG]}DT{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}SG{[MG]|[TS]}E{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}SG[WM]{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}E{I|L}[W{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[{M(Oxidation (M))|F}H]|[RQ]}E[RN]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K];{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}E[W{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4.4757;4.0318;3.7797;3.7655;3.451;3.3359;3.0648;2.8603;2.8603;2.8142 -;-;-;-;-;-;-;-;-;- 3778 1 1.766 116977.7 1.0 3638 4509 8133 HBL1_DMSO_200M_050219_2,8149 HBL1_DMSO_200M_050219_2,8149,IFHEKTSEF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8150 44.147 439.0 246900.0 25 0 14226.0 + 2191 AQAPDLQRV 9 150 499.2749073758181 996.5352618184362 2 499.2747070193291 MULTI CID FTMS 0 0 0 8133 141048.5625 0.0029894618646751 49 -4.348773956298828 17 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 20.41453444215458 0.284085796332423 4 QAAPD{I|L} 6 5 51.081 0.0 0.0 5.1258 0.0 0.0 0.0 398.2185152643188 398.2185152643188 37.1011436037525 0.0 0.0 0.0 0 0.8807196863200843 0.638272163982407 0.0 0.0 QAAPD{I|L} 5.1258 - 582 + 1 1.766 86121.0 1.0 3639 4509 8133 HBL1_DMSO_200M_050219_2,8150 HBL1_DMSO_200M_050219_2,8150,AQAPDLQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8151 44.161 800.0 226280.0 25 0 19565.0 -1 YPECEIRMM 9 119 630.7559828178685 1259.4974127025368 2 630.7568237185478 MULTI CID FTMS 0 0 0 8133 125943.5078125 0.5340970225113807 -2 0.1634597778320312 18 Carbamidomethyl (C),2 Oxidation (M) _YPEC(Carbamidomethyl (C))EIRM(Oxidation (M))M(Oxidation (M))_ ENSG00000066923|ENST00000615138|STAG3;nc|ENSG00000292277|Q9UJ98-2|STAG3;nc|ENSG00000292277|Q9UJ98-3|STAG3;nc|ENSG00000292277|Q9UJ98|STAG3 18.1463463914782 0.3454829746528889 4 YPES 4 -1 58.844 0.0 0.0 4.672 0.0 0.0 0.0 780.2844942682249 780.2844942682249 25.65166884247504 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.4247425010840047 0.0 YPES 4.672 - 690 + 1 1.766 132660.6 0.6800000071525574 3640 4509 8133 HBL1_DMSO_200M_050219_2,8151 HBL1_DMSO_200M_050219_2,8151,YPECEIRMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8152 44.175 800.0 74732.0 25 0 9968.1 + 45871 YYQTIGNHASY 11 88 658.7984054293943 1315.5822579255885 2 658.7996703982353 MULTI CID FTMS 0 0 0 8133 129760.40625 0.2401101573138963 3 -0.2929534912109375 19 Unmodified _YYQTIGNHASY_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF;nc|ENSG00000185627|Q9UNM6-2|PSMD13 17.44264345198275 0.6723198055858692 4 YYQT{I|L} 5 6 43.57 0.0 0.0 3.3118 0.0 0.0 0.0 644.2440814040853 644.2440814040853 31.09575616836501 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.5 0.0 + YYQT{I|L} 3.3118 + + 186 + 1 1.766 50191.0 0.6700000166893005 3641 4509 8133 HBL1_DMSO_200M_050219_2,8152 HBL1_DMSO_200M_050219_2,8152,YYQTIGNHASY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8153 44.19 800.0 100980.0 25 0 8193.2 + 32443 SAEQQFETWQQ 11 109 691.305905656149 0 691.3046752810478 PEAK CID FTMS 0 0 0 8133 105836.578125 0.8170634530037258 1 -0.1258697509765625 20 Unmodified _SAEQQFETWQQ_ REV__ENSG00000185483|ENST00000371079|ROR1 8.155526934196011 0.4672964927559179 4 PP 2 -1 15.217 0.0 0.0 1.1022 0.0 0.0 690.2205932838624 493.2422218231417 1183.4628151070042 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PP 1.1022 - 162 + 1 1.766 60571.0 0.6000000238418579 3642 4509 8133 HBL1_DMSO_200M_050219_2,8153 HBL1_DMSO_200M_050219_2,8153,SAEQQFETWQQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8155 44.194 7.6 5892800.0 25 0 613260.0 + 24990 MPPPPPQGV 9 64 460.23852327962805 918.462493626056 2 460.2390930056572 MULTI CID FTMS 0 0 0 8154 7431933.5 0.4010314619335609 52 -4.4943695068359375 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 56.541270873467816 0.0279970378729908 4 {[HG]|PP}MPP 5 5 28.557 0.0 0.0 3.1092 0.0 0.0 0.0 396.18745975183657 396.18745975183657 -6.030768805449192 0.0 -6.030768805449192 0.0 0 1.110924374808178 0.0 0.0 0.0 {[HG]|PP}MPP 3.1092 - 169 1 1.766 41908.9 1.0 3643 4510 8154 HBL1_DMSO_200M_050219_2,8155 HBL1_DMSO_200M_050219_2,8155,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8156 44.195 33.0 1528100.0 25 0 355960.0 + 21239 LPDKGQKLI 9 68 337.8781051567177 1010.6124860703532 3 337.8779479861259 MULTI CID FTMS 0 0 0 8154 1268960.125 0.2744613526698045 6 -0.4565200805664062 2 Unmodified _LPDKGQKLI_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 22.736283301280096 0.2418982879461534 4 {I|L}{I|L} 2 7 32.474 0.0 0.0 3.2133 0.0 0.0 0.0 781.421394243968 781.421394243968 2.97651103243183 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + {I|L}{I|L} 3.2133 + + 143 + 1 1.766 47089.2 1.0 3644 4510 8154 HBL1_DMSO_200M_050219_2,8156 HBL1_DMSO_200M_050219_2,8156,LPDKGQKLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8157 44.197 23.0 2237700.0 25 0 343080.0 + 8941 FAMNDESVFY 10 67 611.7595783278656 1221.504603722531 2 611.7601806521416 MULTI CID FTMS 0 0 0 8154 2529259.0 1.0 0 0.0 3 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 25.399314129420983 0.3980215340001851 4 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 74.418 0.0 0.0 6.0923 6.0923 85.16 0.0 0.0 0.0 4.259687322722812 56.53720958383822 4.259687322722812 9.164539485499247 0 1.0 0.0 0.0 1.2302046884880935 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;[TP][NS]NQ[HD]{M(Oxidation (M))|F}Y;[TP][WE]Q[HD]{M(Oxidation (M))|F}Y 6.0923;5.342;5.342;5.342;4.5947;4.5947;4.5947;3.595;2.7125 -;-;-;-;-;-;-;-;- 297 1 1.766 42162.9 1.0 3645 4510 8154 HBL1_DMSO_200M_050219_2,8157 HBL1_DMSO_200M_050219_2,8157,FAMNDESVFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8158 44.198 31.0 1687200.0 25 0 181190.0 + 4607 DAYTKKELI 9 77 540.8001570186357 1079.5857611040713 2 540.8007690310478 MULTI CID FTMS 0 0 0 8154 1683269.875 0.9365709819016368 1 -0.0865707397460937 4 Unmodified _DAYTKKELI_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 49.52724829834842 0.0414064571532091 4 DAYTK 5 4 59.157 0.0 0.0 5.4796 0.0 0.0 0.0 498.29441248111567 498.29441248111567 19.98651242028324 0.0 0.0 0.0 0 1.1989700043360187 1.6989700043360187 0.0 0.0 + DAYTK 5.4796 + + 137 + 1 1.766 45357.5 1.0 3646 4510 8154 HBL1_DMSO_200M_050219_2,8158 HBL1_DMSO_200M_050219_2,8158,DAYTKKELI True True DAYTKKELI 44.197769 540.800769031048 48749079.0 8154.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 7.537154356638591 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8159 44.199 57.0 854780.0 25 0 103710.0 + -1 ICFNTDEAAFY 11 82 675.7881282387648 1349.5617035443297 2 675.7894164919853 MULTI CID FTMS 0 0 0 8154 940755.8125 0.8617108598941909 -1 0.1258697509765625 5 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FNTDEAAFY_ REV__ENSG00000163746|ENST00000696113|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7-3|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7|PLSCR2 22.736283301280096 0.5583477779825423 4 ANQQ[HD]{M(Oxidation (M))|F}Y 8 -1 65.795 0.0 0.0 4.8753 0.0 0.0 328.1361677401832 0.0 328.1361677401832 0.0 39.17394631945221 0.0 0.0 0 0.0 0.0 1.1861818737241734 1.7302046884880935 ANQQ[HD]{M(Oxidation (M))|F}Y 4.8753 - 596 + 1 1.766 40795.4 1.0 3647 4510 8154 HBL1_DMSO_200M_050219_2,8159 HBL1_DMSO_200M_050219_2,8159,ICFNTDEAAFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8160 44.201 81.0 1104500.0 25 0 117360.0 + 13653 HPVLPARSI 9 79 495.29803342643226 988.5815139196644 2 495.2986022830009 MULTI CID FTMS 0 0 0 8154 900116.625 0.7599789724178152 -1 0.1258697509765625 6 Unmodified _HPVLPARSI_ ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF 24.99096001346401 0.2132109383330889 4 HPV{I|L} 4 5 41.896 0.0 0.0 4.238 0.0 0.0 0.0 539.2952205385913 539.2952205385913 14.728629198949676 0.0 0.0 0.0 0 0.9957416651753048 0.0 0.0 0.0 + HPV{I|L} 4.238 + + 80 + 1 1.766 74931.5 1.0 3648 4510 8154 HBL1_DMSO_200M_050219_2,8160 HBL1_DMSO_200M_050219_2,8160,HPVLPARSI False True HPVLPARSI 44.201048 495.298602283001 8586901.0 8154.0 ENSG00000141452|ENST00000269221|RMC1;;ENST00000589215.5_1_18:21087981-21111645:+|nuORF 2.808427691459656 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8161 44.204 122.0 632340.0 25 0 42768.0 + 36086 SVQRSFTQV 9 113 526.2804160725946 0 526.2806274294853 PEAK CID FTMS 0 0 0 8154 416766.90625 1.0 0 0.0 7 Unmodified _SVQRSFTQV_ ENSG00000198911|ENST00000361204|SREBF2;nc|ENSG00000198911|Q12772-2|SREBF2 51.41523569358685 0.0277975921585534 4 QT{M(Oxidation (M))|F} 3 7 18.787 0.0 0.0 1.7883 0.0 0.0 117.07949561999528 554.2690523736936 671.348547993689 0.0 0.0 0.0 0.0 0 0.5994850021680094 0.0 0.5 0.0 QT{M(Oxidation (M))|F} 1.7883 - 112 + 1 1.766 64781.2 1.0 3649 4510 8154 HBL1_DMSO_200M_050219_2,8161 HBL1_DMSO_200M_050219_2,8161,SVQRSFTQV True True SVQRSFTQV 44.203583 526.280627429485 2788698.75 8154.0 nc|ENSG00000198911|Q12772-2|SREBF2;;ENSG00000198911|ENST00000361204|SREBF2 7.048689206441243 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8162 44.207 166.0 548250.0 25 0 55155.0 + 3226 AWPEKRGEI 9 101 362.5294940101128 1084.5666526305386 3 362.5292236208916 MULTI CID FTMS 0 0 0 8154 403132.6875 0.133158518456616 23 -1.9098587036132808 8 Unmodified _AWPEKRGEI_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 29.081581746732265 0.1611639662936252 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 5 4 47.435 0.0 0.0 4.3736 0.0 0.0 0.0 470.2390535943969 470.2390535943969 24.247425010840047 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.3494850021680094 0.3494850021680094 + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 4.3736 + + 135 + 1 1.766 82828.3 1.0 3650 4510 8154 HBL1_DMSO_200M_050219_2,8162 HBL1_DMSO_200M_050219_2,8162,AWPEKRGEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8163 44.213 310.0 690290.0 25 0 34649.0 + 990 AFTQDTRSL 9 169 519.7622785162554 1037.510004099311 2 519.7635375857353 MULTI CID FTMS 0 0 0 8154 320284.9375 0.5181536732370162 -1 0.1258697509765625 9 Unmodified _AFTQDTRSL_ ENSG00000257103|ENST00000544216|LSM14A;nc|ENSG00000257103|Q8ND56|LSM14A 43.77239144664712 0.0547478964384323 4 A[MT]PAQTEA 9 7 61.648 0.0 0.0 5.9419 0.0 0.0 119.07398421455234 0.0 119.07398421455234 0.0 42.79811614046742 0.0 0.0 0 0.9489700043360187 0.0 0.6747425010840047 0.3807196863200844 A[MT]PAQTEA 5.9419 - 1142 1 1.766 163863.5 1.0 3651 4510 8154 HBL1_DMSO_200M_050219_2,8163 HBL1_DMSO_200M_050219_2,8163,AFTQDTRSL True True AFTQDTRSL 44.212504 519.763537585735 3795103.25 8154.0 nc|ENSG00000257103|Q8ND56|LSM14A;;ENSG00000257103|ENST00000544216|LSM14A 5.244731426239014 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8164 44.216 152.0 477120.0 25 0 28326.0 + 23929 LVPSAELAGL 10 112 485.2843926959607 968.5542324587212 2 485.2848083376884 MULTI CID FTMS 0 0 0 8154 291801.375 0.850222861942144 -1 0.1258697509765625 10 Unmodified _LVPSAELAGL_ REV__ENST00000318876.9_1_14:73437074-73437530:-|nuORF 14.838274106304384 0.5985701837916485 4 [{I|L}V]P 3 -1 32.319 0.0 0.0 3.3369 0.0 0.0 0.0 656.3283785455686 656.3283785455686 18.049537427956103 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}V]P 3.3369 + + 309 + 1 1.766 59986.8 1.0 3652 4510 8154 HBL1_DMSO_200M_050219_2,8164 HBL1_DMSO_200M_050219_2,8164,LVPSAELAGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8165 44.221 286.0 536810.0 25 0 61556.0 + 35932 SVPEKIERI 9 120 357.54478077209086 0 357.5448791384697 PEAK CID FTMS 0 0 0 8154 241105.875 0.5274692729562362 -3 0.2893295288085937 11 Unmodified _SVPEKIERI_ ENSG00000078177|ENST00000261435|N4BP2;nc|ENSG00000078177|Q86UW6-2|N4BP2 29.84058131909904 0.1118629134628069 4 K{I|L}E 3 6 15.78 0.0 0.0 2.2129 0.0 0.0 55.656514216034175 284.17194544010005 339.8284596561342 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + K{I|L}E 2.2129 + + 18 + 1 1.766 136120.2 1.0 3653 4510 8154 HBL1_DMSO_200M_050219_2,8165 HBL1_DMSO_200M_050219_2,8165,SVPEKIERI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8166 44.224 146.0 465140.0 25 0 40527.0 + 98 AAIENLNEA 9 101 472.7378581812269 943.4611634292536 2 472.7379638552666 MULTI CID FTMS 0 0 0 8154 229963.71875 0.2220195404399685 -4 0.3507347106933594 12 Unmodified _AAIENLNEA_ ENSG00000089053|ENST00000261819|ANAPC5;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5 39.957323273325 0.0756908302845263 4 {[QV]|[N{I|L}]|[RA]|[KV]}EAA{I|L} 6 7 27.531 0.0 0.0 2.9181 0.0 0.0 0.0 329.1095758650537 329.1095758650537 7.803943707888763 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.7742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}EAA{I|L} 2.9181 - 323 1 1.766 57782.6 1.0 3654 4510 8154 HBL1_DMSO_200M_050219_2,8166 HBL1_DMSO_200M_050219_2,8166,AAIENLNEA True True AAIENLNEA 44.223681 472.737963855267 7435100.0 8154.0 nc|ENSG00000089053|Q9UJX4-3|ANAPC5;;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;;ENSG00000089053|ENST00000261819|ANAPC5 4.115367253621419 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8167 44.229 276.0 328770.0 25 0 29736.0 + 36326 SYMKSRLTY 9 115 383.5305910920695 1147.5699438764084 3 383.5302917361259 MULTI CID FTMS 0 0 0 8154 208968.390625 1.0 0 0.0 13 Unmodified _SYMKSRLTY_ chr18:50375239-50375820|34|11.82|0.32|5.23|+|ENST00000494518|SKA1,SKA1;ENSG00000154839|ENST00000285116|SKA1 22.736283301280096 0.2418982879461534 4 G[TP]KM[MT] 7 7 20.278 0.0 0.0 1.767 0.0 0.0 383.21336562324376 0.0 383.21336562324376 0.0 5.673647750663804 0.0 0.0 0 0.3494850021680094 0.0 0.3807196863200844 0.0 G[TP]KM[MT] 1.767 - 85 1 1.766 74549.4 1.0 3655 4510 8154 HBL1_DMSO_200M_050219_2,8167 HBL1_DMSO_200M_050219_2,8167,SYMKSRLTY False True SYMKSRLTY 44.228752 383.530291736126 1440322.75 8154.0 ENSG00000154839|ENST00000285116|SKA1;;chr18:50375239-50375820|34|11.82|0.32|5.23|+|ENST00000494518|SKA1,SKA1 7.691683451334636 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8168 44.236 392.0 220140.0 25 0 25822.0 -1 TKEYNCCMV 9 119 582.2280361508163 1162.4415193684324 2 582.2291137576103 MULTI CID FTMS 0 0 0 8154 166608.203125 0.7172111368612998 1 -0.0865707397460937 14 Carbamidomethyl (C),Oxidation (M) _TKEYNC(Carbamidomethyl (C))CM(Oxidation (M))V_ L1MC1_dup2137|chr3:11202598-11203364:-|1.9306732226679817|0.3234029913481031|2.58|48.0|53|3|anti-sense 13.90604991867851 0.4602628045680013 4 [Y{I|L}][WR]ATP 7 -1 28.996 0.0 0.0 2.4944 0.0 0.0 0.0 271.9668376796904 271.9668376796904 -3.7510649297805534 0.0 -3.7510649297805534 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}][WR]ATP 2.4944 - 256 1 1.766 70475.3 1.0 3656 4510 8154 HBL1_DMSO_200M_050219_2,8168 HBL1_DMSO_200M_050219_2,8168,TKEYNCCMV False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 8169 44.25 800.0 285690.0 25 0 27166.0 + -1 PEGGGCPG 8 142 730.2809830557586 729.2737065891586 1 731.2861816287041 MULTI CID FTMS 0 0 0 8154 167283.90625 0.2489875998423026 -3 0.2893295288085937 15 Carbamidomethyl (C) _PEGGGC(Carbamidomethyl (C))PG_ REV__ENSG00000175175|ENST00000308249|PPM1E 2.889219685676258 0.8067950007271085 4 DD{M(Oxidation (M))|F}YT 5 -1 33.893 0.0 0.0 4.6476 0.0 0.0 0.0 85.0158222119475 85.0158222119475 -2.058399100431835 0.0 -2.058399100431835 0.0 0 0.0 0.7695510786217261 0.6989700043360187 0.0 DD{M(Oxidation (M))|F}YT 4.6476 - 491 1 1.766 160149.7 0.7300000190734863 3657 4510 8154 HBL1_DMSO_200M_050219_2,8169 HBL1_DMSO_200M_050219_2,8169,PEGGGCPG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8170 44.257 392.0 348380.0 25 0 49248.0 + 35931 SVPEKIERI 9 128 535.8131887019056 1069.611824470611 2 535.8145629763603 MULTI CID FTMS 0 0 0 8154 160807.953125 0.2860441367576442 6 -0.4565200805664062 16 Unmodified _SVPEKIERI_ ENSG00000078177|ENST00000261435|N4BP2;nc|ENSG00000078177|Q86UW6-2|N4BP2 29.84058131909904 0.1515068451768857 4 [VS]PEK{I|L}ER{I|L} 9 0 + 62.489 0.0 0.0 5.8422 5.8422 83.9 0.0 0.0 0.0 28.411611309069613 7.201184835616026 7.201184835616026 9.030899869919438 0 0.3807196863200844 2.0 0.3494850021680094 0.3494850021680094 + + [VS]PEK{I|L}ER{I|L};[VS]PE{I|L}KER{I|L};[VS]PEK{I|L}[W{I|L}]V;[VS]PE{I|L}K[W{I|L}]V;[VS]KKSKEP[PA];[VS]PEKSKKAP;[VS]{I|L}[EP]KER{I|L};[VS]{I|L}[EP]K[W{I|L}]V;[EP]K{I|L}D{I|L}T[RV];[VS]PA{I|L}D{I|L}T[RV] 5.8422;4.9979;4.9093;4.065;3.8771;3.8122;3.481;2.5481;2.5024;2.3649 +;-;-;-;-;-;-;-;-;- + 444 + 1 1.766 110028.6 1.0 3658 4510 8154 HBL1_DMSO_200M_050219_2,8170 HBL1_DMSO_200M_050219_2,8170,SVPEKIERI False True SVPEKIERI 44.256646 535.81456297636 26070818.0 8154.0 nc|ENSG00000078177|Q86UW6-2|N4BP2;;ENSG00000078177|ENST00000261435|N4BP2 3.0699194272359214 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8171 44.261 209.0 432800.0 25 0 42279.0 + 11870 GLTHPGVPSL 10 113 489.2738003626761 976.5330477921524 2 489.2715331912041 MULTI CID FTMS 0 0 0 -1 0 17 Unmodified _GLTHPGVPSL_ REV__ENSG00000269743|ENST00000594199|SLC25A53 13.042465956692816 0.6287021003332052 4 PAYA[RP] 6 -1 23.773 0.0 0.0 2.4344 0.0 0.0 303.1726246564469 0.0 303.1726246564469 0.0 12.663800089887545 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 PAYA[RP] 2.4344 - 225 1 1.766 73771.9 1.0 3659 4510 8154 HBL1_DMSO_200M_050219_2,8171 HBL1_DMSO_200M_050219_2,8171,GLTHPGVPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8172 44.266 208.0 280160.0 25 0 19732.0 + -1 SQWDSPMRV 9 93 561.2552442997708 1120.4959356663414 2 561.2639648318291 MULTI CID FTMS 0 0 0 -1 0 18 Oxidation (M) _SQWDSPM(Oxidation (M))RV_ ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B 11.494710602746466 0.5255349189887087 4 {[QS]|[NT]}WDS 5 -1 27.479 0.0 0.0 2.4524 0.0 0.0 0.0 514.2462460550191 514.2462460550191 0.3658448645242593 0.0 0.0 0.0 0 0.4247425010840047 0.8538719643217619 0.0 0.0 {[QS]|[NT]}WDS 2.4524 + + 180 + 1 1.766 50923.4 1.0 3660 4510 8154 HBL1_DMSO_200M_050219_2,8172 HBL1_DMSO_200M_050219_2,8172,SQWDSPMRV False False SQWDSPMRV 44.265737 561.263964831829 2004092.375 8154.0 ENSG00000132549|ENST00000357162|VPS13B;;nc|ENSG00000132549|Q7Z7G8|VPS13B;;nc|ENSG00000132549|Q7Z7G8-6|VPS13B 3.073471705118815 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8173 44.268 92.0 551050.0 25 0 70554.0 + + 7431 DALSAAKEV 9 74 452.2469644033468 0 452.2472717165947 PEAK CID FTMS 0 0 0 8154 161459.375 0.3340888218330249 -2 0.2407913208007812 19 Unmodified _EGLRRACV_ nc|ENSG00000146576|Q96N11-2|INTS15;ENSG00000146576|ENST00000344417|INTS15 13.50788311687929 0.5021269579892848 4 {I|L} 1 -1 10.485 0.0 0.0 1.1617 0.0 0.0 603.3316230432187 183.0417879693969 786.3734110126155 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 1.1617 + + 88 + 1 1.766 46256.5 1.0 3661 4510 8154 HBL1_DMSO_200M_050219_2,8173 HBL1_DMSO_200M_050219_2,8173,EGLRRACV False False DALSAAKEV 44.267756 452.247271716595 2150529.0 8154.0 nc|ENSG00000146576|Q96N11-2|INTS15;;ENSG00000146576|ENST00000344417|INTS15 4.739481290181478 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8174 44.276 484.0 225710.0 25 0 9320.2 + 18037 KSRWKSQEE 9 129 589.3008221870414 1176.587091440883 2 589.3005859255791 MULTI CID FTMS 0 0 0 8154 162411.15625 1.0 0 0.0 20 Unmodified _KSRWKSQEE_ REV__ENSG00000269964|ENST00000684080|MEI4 13.90604991867851 0.4602628045680013 4 YQEKV[PA]{I|L} 8 -1 42.74 0.0 0.0 3.6326 0.0 0.0 113.01832998127776 132.04586206607658 245.0641920473544 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0356668758921828 0.4247425010840047 YQEKV[PA]{I|L} 3.6326 - 818 + 1 1.766 82037.1 1.0 3662 4510 8154 HBL1_DMSO_200M_050219_2,8174 HBL1_DMSO_200M_050219_2,8174,KSRWKSQEE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8176 44.281 13.0 3095000.0 25 0 242110.0 + 37029 TFSNQAESM 9 82 507.713161538349 1013.411770143498 2 507.7140075564384 MULTI CID FTMS 0 0 0 8175 1835356.5 0.1254986405359276 3 -0.1930503845214843 1 Unmodified _TFSNQAESM_ ENSG00000133958|ENST00000695012|UNC79;nc|ENSG00000133958|Q9P2D8-2|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;nc|ENSG00000133958|Q9P2D8|UNC79 7.910154910731844 0.6385446671287552 4 SM 2 7 17.959 0.0 0.0 1.7721 0.0 0.0 777.3284704382231 0.0 777.3284704382231 0.0 5.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 + SM 1.7721 + + 85 + 1 1.764 40098.9 1.0 3663 4511 8175 HBL1_DMSO_200M_050219_2,8176 HBL1_DMSO_200M_050219_2,8176,TFSNQAESM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8177 44.282 25.0 2447200.0 25 0 255810.0 + 41638 VPPPSAQEI 9 103 469.2527500155162 936.4909470978324 2 469.2531616091728 MULTI CID FTMS 0 0 0 8175 2395303.5 0.4349595429926182 4 -0.2631645202636719 2 Unmodified _VPPPSAQEI_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 46.020951573049366 0.0490941689151868 4 [VP]P[PS]AQE{I|L} 9 0 + 53.604 0.0 0.0 5.7239 5.7239 77.788 0.0 0.0 0.0 3.644870237789085 16.478174818886373 3.644870237789085 3.644870237789085 0 0.4482935309920375 1.3979400086720375 0.7059771852360797 0.0 + + [VP]P[PS]AQE{I|L};{[HG]|PP}SPAVQE{I|L};{[HG]|PP}SPVAQE{I|L};[VP]P[PS]A[AG]E{I|L};{[HG]|PP}ASPVQE{I|L};{[HG]|PP}SPAQVE{I|L};{[HG]|PP}SPAV[AG]E{I|L};{[HG]|PP}SAPVQE{I|L};{[HG]|PP}SPVA[AG]E{I|L};{[HG]|PP}ASPQVE{I|L} 5.7239;5.3347;5.0523;4.7407;4.666;4.6068;4.3515;4.3445;4.069;3.938 +;-;-;-;-;-;-;-;-;- + 444 1 1.764 51996.7 1.0 3664 4511 8175 HBL1_DMSO_200M_050219_2,8177 HBL1_DMSO_200M_050219_2,8177,VPPPSAQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8178 44.283 15.0 2920900.0 25 0 290090.0 + 44923 YPPPVFYM 8 79 507.2427850769938 1012.4710172207876 2 507.2436401247978 MULTI CID FTMS 0 0 0 8175 2421133.25 0.95538836412065 1 -0.0805130004882812 3 Unmodified _YPPPVFYM_ REV__ENSG00000145934|ENST00000518659|TENM2;REV__nc|ENSG00000145934|Q9NT68-2|TENM2 17.086550045450526 0.6584923310065985 4 YPV{M(Oxidation (M))|F}[RN]SM 8 -1 + 66.004 0.0 0.0 6.5191 6.5191 91.212 0.0 0.0 0.0 53.785181119309456 14.90463059526342 14.90463059526342 19.62849336298477 0 0.3252574989159953 1.5228787452803376 0.2396518287104437 0.0 YPV{M(Oxidation (M))|F}[RN]SM;YPV{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]NQ;YPV[QT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M;YPV{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]GGQ;YPV[QT][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}VNQ;[VP][Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}VNQ;[KS][YQ]{M(Oxidation (M))|F}VNQ 6.5191;4.5804;4.0826;3.6656;3.3922;2.8235;2.7813;1.8594 -;-;-;-;-;-;-;- 254 + 1 1.764 41262.0 1.0 3665 4511 8175 HBL1_DMSO_200M_050219_2,8178 HBL1_DMSO_200M_050219_2,8178,YPPPVFYM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8179 44.287 174.0 369210.0 25 0 16817.0 + -1 AQCSRVHCHWC 11 87 722.2966691445704 1442.578785355941 2 722.2978393435478 MULTI CID FTMS 0 0 0 8175 282983.125 0.7163638380183891 -1 0.0865707397460937 4 2 Carbamidomethyl (C) _AQC(Carbamidomethyl (C))SRVHC(Carbamidomethyl (C))HWC_ REV__ENSG00000179292|ENST00000327259|TMEM151A 8.745405648335112 0.8338865417133445 4 [QA]HDE[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}Y 11 -1 [QA] + + 65.116 8.7236 4.3817 4.5139 4.5139 50.586 0.0 0.0 0.0 0.0 52.77408644139668 0.0 0.0 0 2.0356668758921828 0.0 0.0 0.7134679910804405 [QA]HDE[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}Y 4.5139 - 1080 + 1 1.764 51137.4 1.0 3666 4511 8175 HBL1_DMSO_200M_050219_2,8179 HBL1_DMSO_200M_050219_2,8179,AQCSRVHCHWC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8180 44.295 458.0 218390.0 25 0 19270.0 + -1 VPPCGHVPP 9 121 480.2439781549132 958.4734033766264 2 480.2431518435478 MULTI CID FTMS 0 0 0 8175 180913.9375 0.3402641051963274 6 -0.4807395935058594 5 Carbamidomethyl (C) _VPPC(Carbamidomethyl (C))GHVPP_ REV__ENST00000307845.7_1_2:10567007-10567424:+|nuORF 20.871210003555333 0.2717241269066626 4 VPPW 4 -1 59.667 0.0 0.0 6.2252 0.0 0.0 0.0 476.21439864761226 476.21439864761226 44.71848749616356 0.0 0.0 0.0 0 0.7728787452803376 2.0 0.0 0.0 VPPW 6.2252 - 226 + 1 1.764 78939.4 1.0 3667 4511 8175 HBL1_DMSO_200M_050219_2,8180 HBL1_DMSO_200M_050219_2,8180,VPPCGHVPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8181 44.308 800.0 208350.0 25 0 25013.0 27792 PLPPPPPPP 9 135 454.7654400354143 907.5163271376288 2 454.7654296755791 MULTI CID FTMS 0 0 0 8175 162742.484375 0.725233837091004 12 -1.0740470886230469 6 Unmodified _PLPPPPPPP_ ENSG00000009694|ENST00000371130|TENM1;ENSG00000100312|ENST00000216139|ACR;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000117560|ENST00000367721|FASLG;ENSG00000124496|ENST00000695948|TRERF1;ENSG00000126460|ENST00000246794|PRRG2;ENSG00000132510|ENST00000448097|KDM6B;ENSG00000138771|ENST00000296043|SHROOM3;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000141456|ENST00000572293|PELP1;ENSG00000146083|ENST00000274811|RNF44;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000160685|ENST00000535420|ZBTB7B;ENSG00000170234|ENST00000307063|PWWP2A;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000175073|ENST00000310421|VCPIP1;ENSG00000175785|ENST00000393140|PRIMA1;ENSG00000176182|ENST00000322217|MYPOP;ENSG00000188779|ENST00000380035|SKOR1;ENSG00000204334|ENST00000697325|ERICH2;ENSG00000248905|ENST00000616417|FMN1;ENSG00000259956|ENST00000563281|RBM15B;ENST00000361272.8_2_8:17102747-17104366:-|nuORF;ENST00000379565.7_1_X:20227482-20284914:-|nuORF;ENST00000508096.1_1_10:126605730-126631034:+|nuORF;ENST00000508478.1_1_5:175957081-175957609:-|nuORF;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENST00000596700.5_1_19:50084718-50093643:+|nuORF;ENST00000597121.5_1_19:50086773-50093643:+|nuORF;nc|ENSG00000009694|Q9UKZ4-2|TENM1;nc|ENSG00000110076|P58401|NRXN2;nc|ENSG00000117560|P48023-2|FASLG;nc|ENSG00000124496|Q96PN7|TRERF1;nc|ENSG00000132510|O15054-1|KDM6B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000146083|Q7L0R7-2|RNF44;nc|ENSG00000160685|O15156-2|ZBTB7B;nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170234|Q96N64-2|PWWP2A;nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000175785|Q86XR5-2|PRIMA1;nc|ENSG00000188779|P84550-3|SKOR1;nc|ENSG00000248905|Q68DA7-5|FMN1;REV__ENSG00000048991|ENST00000683871|R3HDM1;REV__ENSG00000066855|ENST00000262146|MTFR1;REV__ENSG00000068489|ENST00000262293|PRR11;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000100592|ENST00000360909|DAAM1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000119596|ENST00000325680|YLPM1;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000125740|ENST00000353609|FOSB;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__ENSG00000132510|ENST00000448097|KDM6B;REV__ENSG00000135250|ENST00000393651|SRPK2;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138081|ENST00000403359|FBXO11;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__ENSG00000141431|ENST00000269197|ASXL3;REV__ENSG00000145414|ENST00000274054|NAF1;REV__ENSG00000146122|ENST00000274867|DAAM2;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152409|ENST00000396137|JMY;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000157827|ENST00000288670|FMNL2;REV__ENSG00000162775|ENST00000369784|RBM15;REV__ENSG00000164916|ENST00000328914|FOXK1;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000173166|ENST00000319170|RAPH1;REV__ENSG00000173917|ENST00000330070|HOXB2;REV__ENSG00000175073|ENST00000310421|VCPIP1;REV__ENSG00000176624|ENST00000406189|MEX3C;REV__ENSG00000186472|ENST00000333891|PCLO;REV__ENSG00000187017|ENST00000645284|ESPN;REV__ENSG00000187164|ENST00000355371|SHTN1;REV__ENSG00000203485|ENST00000392634|INF2;REV__ENSG00000215045|ENST00000457091|GRID2IP;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000274209|ENST00000620264|ANTXRL;REV__ENST00000324225.8_1_11:117049861-117050083:+|nuORF;REV__ENST00000358635.7_1_4:140005384-140005639:-|nuORF;REV__ENST00000368219.1_1_1:156698226-156698472:-|nuORF;REV__ENST00000379565.7_1_X:20227482-20284914:-|nuORF;REV__ENST00000424808.6_1_8:66582187-66620357:+|nuORF;REV__ENST00000471339.1_1_5:173036657-173043649:-|nuORF;REV__ENST00000519935.1_1_7:27209203-27211037:+|nuORF;REV__ENST00000587358.1_1_19:45974364-45976267:+|nuORF;REV__nc|ENSG00000048991|Q15032-2|R3HDM1;REV__nc|ENSG00000048991|Q15032-3|R3HDM1;REV__nc|ENSG00000048991|Q15032-4|R3HDM1;REV__nc|ENSG00000048991|Q15032|R3HDM1;REV__nc|ENSG00000066855|Q15390-2|MTFR1;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100592|Q9Y4D1-3|DAAM1;REV__nc|ENSG00000100592|Q9Y4D1|DAAM1;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000119596|P49750-1|YLPM1;REV__nc|ENSG00000119596|P49750-3|YLPM1;REV__nc|ENSG00000125740|P53539-10|FOSB;REV__nc|ENSG00000125740|P53539-2|FOSB;REV__nc|ENSG00000125740|P53539-3|FOSB;REV__nc|ENSG00000125740|P53539-5|FOSB;REV__nc|ENSG00000125740|P53539-8|FOSB;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1;REV__nc|ENSG00000132510|O15054-1|KDM6B;REV__nc|ENSG00000135250|P78362|SRPK2;REV__nc|ENSG00000138081|Q86XK2-4|FBXO11;REV__nc|ENSG00000138081|Q86XK2-5|FBXO11;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3;REV__nc|ENSG00000140836|Q15911-2|ZFHX3;REV__nc|ENSG00000146122|Q86T65-4|DAAM2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000157827|Q96PY5|FMNL2;REV__nc|ENSG00000162775|Q96T37-2|RBM15;REV__nc|ENSG00000162775|Q96T37-3|RBM15;REV__nc|ENSG00000162775|Q96T37-4|RBM15;REV__nc|ENSG00000170004|Q12873-3|CHD3;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__nc|ENSG00000187017|B1AK53-2|ESPN;REV__nc|ENSG00000187164|A0MZ66-2|SHTN1;REV__nc|ENSG00000187164|A0MZ66-3|SHTN1;REV__nc|ENSG00000187164|A0MZ66-4|SHTN1;REV__nc|ENSG00000187164|A0MZ66-5|SHTN1;REV__nc|ENSG00000187164|A0MZ66-6|SHTN1;REV__nc|ENSG00000187164|A0MZ66-8|SHTN1;REV__nc|ENSG00000203485|Q27J81-2|INF2;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__PCLO|p.V3720Sfs*2|1|0.13|ENSG00000186472|chr7:82916828-82916829|-/T|frameshift_variant 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP[YK] 8 3 + 42.986 0.0 0.0 4.7367 4.7367 82.593 0.0 0.0 0.0 14.259687322722815 6.989700043360188 6.989700043360188 12.634643315900792 0 1.1382104921644451 1.6989700043360187 0.0 0.0 [{I|L}P]PPPP[YK];[{I|L}P][YK]P[YK];{[HG]|PP}P{I|L}PP[YK];[YK]{I|L}PP[YK];{[HG]|PP}{I|L}PPP[YK];{[HG]|PP}PP{I|L}P[YK];[YK]P{I|L}P[YK];[{I|L}P]P[YK][YK];[{M(Oxidation (M))|F}V]AA{I|L}P[YK];{[HG]|PP}{I|L}[YK][YK] 4.7367;3.3444;3.1654;3.1225;2.7269;2.6735;2.6306;2.5878;0.88269;0.57803 -;-;-;-;-;-;-;-;-;- 273 1 1.764 131360.5 0.699999988079071 3668 4511 8175 HBL1_DMSO_200M_050219_2,8181 HBL1_DMSO_200M_050219_2,8181,PLPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8182 44.315 384.0 275570.0 25 0 26593.0 + 3223 AWPEKRGEI 9 124 543.2904189954048 1084.5662850576095 2 543.2895385622978 MULTI CID FTMS 0 0 0 8175 177846.71875 0.1339120373311633 23 -1.833560943603516 7 Unmodified _AWPEKRGEI_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 13.90604991867851 0.4602628045680013 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE 4 5 37.435 0.0 0.0 3.4516 0.0 0.0 0.0 598.3325356754585 598.3325356754585 27.52017933357808 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE 3.4516 + + 147 + 1 1.764 84101.8 1.0 3669 4511 8175 HBL1_DMSO_200M_050219_2,8182 HBL1_DMSO_200M_050219_2,8182,AWPEKRGEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8183 44.329 800.0 220760.0 25 0 25031.0 -1 CRPFEESGTCK 11 137 657.2826858974448 1312.5508188616895 2 657.2841064333916 MULTI CID FTMS 0 0 0 8175 144269.78125 0.121854944927322 -4 0.3759002685546875 8 Carbamidomethyl (C) _C(Carbamidomethyl (C))RPFEESGTCK_ ENSG00000152518|ENST00000282388|ZFP36L2 10.799506525563784 0.8105043987015127 4 VSSVET{I|L} 7 -1 46.279 0.0 0.0 3.5259 0.0 0.0 221.0900777501645 373.06553064517817 594.1556083953427 0.0 0.0 0.0 0.0 0 0.0 0.0 1.8098943791441968 0.0 VSSVET{I|L} 3.5259 - 2327 + 1 1.764 129355.1 0.7300000190734863 3670 4511 8175 HBL1_DMSO_200M_050219_2,8183 HBL1_DMSO_200M_050219_2,8183,CRPFEESGTCK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8184 44.343 800.0 225240.0 25 0 27802.0 -1 YPECEIRMM 9 187 420.8393770744884 1259.4963018236651 3 421.1741515994072 MULTI CID FTMS 0 0 0 8175 146546.296875 0.7913080637976188 1 -0.0805130004882812 9 Carbamidomethyl (C),2 Oxidation (M) _YPEC(Carbamidomethyl (C))EIRM(Oxidation (M))M(Oxidation (M))_ ENSG00000066923|ENST00000615138|STAG3;nc|ENSG00000292277|Q9UJ98-2|STAG3;nc|ENSG00000292277|Q9UJ98-3|STAG3;nc|ENSG00000292277|Q9UJ98|STAG3 18.373094154950223 0.3393451798331396 4 YPE 3 -1 52.167 0.0 0.0 4.1419 0.0 0.0 0.0 867.3173939947219 867.3173939947219 -3.5876737108399226 0.0 -3.5876737108399226 0.0 0 0.4247425010840047 1.3979400086720375 0.7742275032520141 0.0 YPE 4.1419 + + 807 + 1 1.764 145920.1 0.6200000047683716 3671 4511 8175 HBL1_DMSO_200M_050219_2,8184 HBL1_DMSO_200M_050219_2,8184,YPECEIRMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8185 44.357 800.0 219900.0 25 0 9703.6 -1 CYRCYHFCGCY 11 152 737.7629716501034 1473.5113903670067 2 737.7655517458916 MULTI CID FTMS 0 0 0 8175 134220.609375 0.5321908755744438 -3 0.327362060546875 10 Carbamidomethyl (C) _C(Carbamidomethyl (C))YRCYHFCGCY_ ENST00000374843.8_1_6:32918343-32920806:-|nuORF;ENST00000475627.1_1_6:32918275-32920806:-|nuORF 3.2813086475875832 0.8596665074481906 4 [TP]EANQQAED 10 -1 60.196 0.0 0.0 4.0852 0.0 0.0 0.0 387.0510347955688 387.0510347955688 27.151413698603264 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.3252574989159953 [TP]EANQQAED 4.0852 - 5100 + 1 1.764 121798.0 0.6600000262260437 3672 4511 8175 HBL1_DMSO_200M_050219_2,8185 HBL1_DMSO_200M_050219_2,8185,CYRCYHFCGCY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8187 44.361 2.6 19421000.0 25 0 2217000.0 8633 EVEEDEYKAFY 11 70 711.3065774151316 1420.5986018970632 2 711.3085815310478 MULTI CID FTMS 0 0 0 8186 23836284.0 0.9312542081944862 -2 0.167083740234375 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 4 [QA]HDEAQQGGA{M(Oxidation (M))|F}Y 13 9 + 68.991 0.0 0.0 4.8565 4.8565 68.737 0.0 0.0 0.0 3.288090537885793 52.001286470197925 3.288090537885793 0.7968969065610452 0 0.8935078169319297 0.0 0.0 1.2302046884880935 [QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQNAGA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]GGA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QGGA{M(Oxidation (M))|F}Y;[QA]HDEAQGGAGA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]NAGA{M(Oxidation (M))|F}Y;[QA]HDEAQQGQ{M(Oxidation (M))|F}Y;[QA]HDEAQNAQ{M(Oxidation (M))|F}Y 4.8565;4.8004;4.6008;4.5447;4.2178;4.2178;4.1617;4.1617;4.0899;4.0338 -;-;-;-;-;-;-;-;-;- 1163 1 1.764 41455.0 1.0 3673 4512 8186 HBL1_DMSO_200M_050219_2,8187 HBL1_DMSO_200M_050219_2,8187,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8188 44.363 66.0 915090.0 25 0 84517.0 + 45513 YTSGTFRTV 9 102 516.2609455430522 1030.5073381529044 2 516.2616454958916 MULTI CID FTMS 0 0 0 8186 756958.9375 0.1840893179540292 10 -0.912841796875 2 Unmodified _YTSGTFRTV_ ENSG00000112118|ENST00000596288|MCM3;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;nc|ENSG00000112118|P25205-2|MCM3 24.99096001346401 0.2132109383330889 4 YTSGT 5 4 59.993 0.0 0.0 5.8217 0.0 0.0 0.0 518.2743624322874 518.2743624322874 29.437648855703703 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 + YTSGT 5.8217 + + 165 + 1 1.764 54444.9 1.0 3674 4512 8186 HBL1_DMSO_200M_050219_2,8188 HBL1_DMSO_200M_050219_2,8188,YTSGTFRTV False True YTSGTFRTV 44.362914 516.261645495892 55288852.0 8186.0 ENSG00000112118|ENST00000596288|MCM3;;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;;nc|ENSG00000112118|P25205-2|MCM3 3.238266388575236 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8189 44.365 80.0 618080.0 25 0 51430.0 + 39557 VAYQREPQI 9 96 552.2957547233497 1102.5769565134992 2 552.2963134646416 MULTI CID FTMS 0 0 0 8186 671571.0625 0.5875562477457703 -3 0.2929534912109375 3 Unmodified _VAYQREPQI_ ENSG00000165271|ENST00000297990|NOL6;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6 67.83816525789305 0.0219346420158844 4 VAYQREPQ{I|L} 9 0 + 82.348 0.0 0.0 7.4687 7.4687 93.118 0.0 0.0 0.0 42.25772496747986 18.746068678535792 18.746068678535792 13.309159218443796 0 1.7346368802282015 1.6989700043360187 0.3054621874040891 1.5114393726401687 + + VAYQREPQ{I|L};VAG{I|L}M{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PQ{I|L};VAG{I|L}[VS]ERC(Carbamidomethyl (C)){I|L};VAW[W{I|L}]RC(Carbamidomethyl (C)){I|L};VAWD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PQ{I|L};VAG{I|L}[VS]ERGC{I|L};VAW[W{I|L}]RGC{I|L};VA[VS]{[VA]|[{I|L}G]}ERC(Carbamidomethyl (C)){I|L};VA[VS]E{[VA]|[{I|L}G]}RC(Carbamidomethyl (C)){I|L};{[VA]|[{I|L}G]}[VS]ERQCV{I|L} 7.4687;6.2616;5.6912;5.6705;5.557;5.4686;5.439;4.9902;4.9902;4.845 +;-;-;-;-;-;-;-;-;- + 801 + 1 1.764 45122.8 1.0 3675 4512 8186 HBL1_DMSO_200M_050219_2,8189 HBL1_DMSO_200M_050219_2,8189,VAYQREPQI True True VAYQREPQI 44.364749 552.296313464642 27868588.0 8186.0 ENSG00000165271|ENST00000297990|NOL6;;nc|ENSG00000165271|Q9H6R4-2|NOL6;;nc|ENSG00000165271|Q9H6R4-4|NOL6 7.891677061716716 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8190 44.367 119.0 576810.0 25 0 65843.0 37533 TLHPVWSQQ 9 87 548.2824597880839 1094.5503666429677 2 548.2832519412041 MULTI CID FTMS 0 0 0 8186 377856.59375 0.3201441311852095 8 -0.7455101013183594 4 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 15.738622578938676 0.4106572216562794 4 EHPPEH[HK] 8 7 38.326 0.0 0.0 3.5015 0.0 0.0 85.08981520820468 0.0 85.08981520820468 0.0 28.59366274865181 0.0 0.0 0 2.0924778212679485 0.0 0.7302046884880937 0.0 EHPPEH[HK] 3.5015 - 282 1 1.764 59916.4 1.0 3676 4512 8186 HBL1_DMSO_200M_050219_2,8190 HBL1_DMSO_200M_050219_2,8190,TLHPVWSQQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8191 44.37 124.0 602950.0 25 0 79166.0 + 12884 GVYGDVQRV 9 101 496.7609979739176 0 496.7611266970634 PEAK CID FTMS 0 0 0 8186 349853.0 0.7115498359633393 -1 0.0805130004882812 5 Unmodified _GVYGDVQRV_ ENSG00000011304|ENST00000356948|PTBP1;ENSG00000117569|ENST00000674951|PTBP2;ENST00000586944.5_1_19:807712-810823:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;nc|ENSG00000117569|Q9UKA9-2|PTBP2;nc|ENSG00000117569|Q9UKA9-3|PTBP2;nc|ENSG00000117569|Q9UKA9-4|PTBP2 41.8396318013385 0.053988301646488 4 YGDVQR 6 3 37.278 0.0 0.0 3.7597 0.0 0.0 156.08821829726168 114.05668054752186 270.14489884478354 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.3054621874040891 0.0 + YGDVQR 3.7597 + + 289 + 1 1.764 63127.5 1.0 3677 4512 8186 HBL1_DMSO_200M_050219_2,8191 HBL1_DMSO_200M_050219_2,8191,GVYGDVQRV True True GVYGDVQRV 44.369793 496.761126697063 6651574.5 8186.0 nc|ENSG00000117569|Q9UKA9-2|PTBP2;;ENSG00000011304|ENST00000356948|PTBP1;;nc|ENSG00000011304|P26599-1|PTBP1;;ENST00000586944.5_1_19:807712-810823:+|nuORF;;nc|ENSG00000117569|Q9UKA9-3|PTBP2;;nc|ENSG00000011304|P26599-2|PTBP1;;nc|ENSG00000117569|Q9UKA9-4|PTBP2;;ENSG00000117569|ENST00000674951|PTBP2 6.00009028116862 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8192 44.373 162.0 360610.0 25 0 58292.0 + 45903 YYSPTKNEI 9 87 557.7746447538134 0 557.7745239138603 PEAK CID FTMS 0 0 0 8186 301029.5 0.4715769570288237 2 -0.1125373840332031 6 Unmodified _YYSPTKNEI_ ENSG00000117298|ENST00000374893|ECE1;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 27.628801355627647 0.1319135480000405 4 SRMSPT 6 7 29.882 0.0 0.0 2.6836 0.0 0.0 326.12704983314705 125.07259546451408 451.1996452976611 0.0 0.0 0.0 0.0 0 1.1677353201839438 0.0 0.805462187404089 0.0 SRMSPT 2.6836 - 93 + 1 1.764 49998.7 1.0 3678 4512 8186 HBL1_DMSO_200M_050219_2,8192 HBL1_DMSO_200M_050219_2,8192,YYSPTKNEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8193 44.379 313.0 586770.0 25 0 84995.0 + + 21427 LPRAEVSRI 9 148 347.545169468385 1039.613679005355 3 347.5450927615166 MULTI CID FTMS 0 0 0 8186 270555.90625 0.4959847628484266 -2 0.167083740234375 7 Unmodified _LPGWVSRLL_ LCMT1|p.E297G|1|0.22|ENSG00000205629|chr16:25174942-25174942|A/G|missense_variant;nc|ENSG00000205629|Q9UIC8-3|LCMT1;nc|ENSG00000205629|Q9UIC8-2|LCMT1;ENSG00000205629|ENST00000399069|LCMT1 21.53697664764585 0.2571576504437394 4 {I|L}{I|L}[NP]EV{M(Oxidation (M))|F}{I|L} 8 -1 34.412 0.0 0.0 3.3101 0.0 0.0 0.0 111.04564081363516 111.04564081363516 22.004456988330965 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.8494850021680094 {I|L}{I|L}[NP]EV{M(Oxidation (M))|F}{I|L} 3.3101 - 340 + 1 1.764 150480.0 1.0 3679 4512 8186 HBL1_DMSO_200M_050219_2,8193 HBL1_DMSO_200M_050219_2,8193,LPGWVSRLL False False LPRAEVSRI 44.378693 347.545092761517 5137046.5 8186.0 LCMT1|p.E297G|1|0.22|ENSG00000205629|chr16:25174942-25174942|A/G|missense_variant;;nc|ENSG00000205629|Q9UIC8-3|LCMT1;;nc|ENSG00000205629|Q9UIC8-2|LCMT1;;ENSG00000205629|ENST00000399069|LCMT1 1.934399624665578 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8194 44.385 362.0 257880.0 25 0 40476.0 + 3590 DAAKQINI 8 118 436.74532832617206 871.4761037191441 2 436.7457153201103 MULTI CID FTMS 0 0 0 8186 231772.765625 0.9873905070716096 -1 0.0805130004882812 8 Unmodified _DAAKQINI_ ENSG00000090104|ENST00000367459|RGS1 61.357469665136826 0.1155423183535659 4 {[DA]|[EG]}AKQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 8 0 + 56.687 0.0 0.0 6.5047 6.5047 83.688 0.0 0.0 0.0 27.060544824331245 0.6694678963061307 0.6694678963061307 6.016740735028847 0 0.8252574989159953 2.0 0.75 0.0 + + {[DA]|[EG]}AKQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[DA]|[EG]}AKVAA{[QV]|[N{I|L}]|[RA]|[KV]};{[DA]|[EG]}AK[AG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[DA]|[EG]}AKVA{I|L}{[QG]|[NA]};{[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[VG][QT]Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}VAA{[QV]|[N{I|L}]|[RA]|[KV]};[KA]{[DA]|[EG]}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[AG]EKQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 6.5047;5.8143;5.4419;5.239;3.3996;3.2459;3.1654;2.7092;2.6373;2.6188 +;-;-;-;-;-;-;-;-;- + 1116 1 1.764 76827.9 1.0 3680 4512 8186 HBL1_DMSO_200M_050219_2,8194 HBL1_DMSO_200M_050219_2,8194,DAAKQINI True True DAAKQINI 44.385205 436.74571532011 1843319.125 8186.0 ENSG00000090104|ENST00000367459|RGS1 2.8919061422348022 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8195 44.393 433.0 308310.0 25 0 34509.0 21422 LPGSGTTPLL 10 133 478.2763552182567 954.5381575033134 2 478.2765380740166 MULTI CID FTMS 0 0 0 8186 207259.125 0.4437830815283023 -3 0.2929534912109375 9 Unmodified _LPGSGTTPLL_ ENSG00000118898|ENST00000345988|PPL 61.357469665136826 0.0330252915653943 4 {I|L}PTKG[TP]E{I|L} 9 4 + 67.545 0.0 0.0 7.0762 7.0762 93.192 0.0 0.0 0.0 27.59349433103128 11.616225017174392 11.616225017174392 19.29824835903905 0 1.045114016114533 2.0 1.2302046884880935 0.0 {I|L}PTKG[TP]E{I|L};[TP]KGETP{I|L}{I|L};[TP]GEKTP{I|L}{I|L};[TP]GKETP{I|L}{I|L};[TP]KG[TP]E{I|L}{I|L};[TP]{I|L}SNTP{I|L}{I|L};[TP]KGET{I|L}P{I|L};[TP]GK[TP]E{I|L}{I|L};[TP]GEKT{I|L}P{I|L};[PG]TEKTP{I|L}{I|L} 7.0762;5.0544;4.7583;4.4237;4.1893;3.9527;3.7942;3.5586;3.4982;3.3984 -;-;-;-;-;-;-;-;-;- 880 + 1 1.764 104353.3 1.0 3681 4512 8186 HBL1_DMSO_200M_050219_2,8195 HBL1_DMSO_200M_050219_2,8195,LPGSGTTPLL True False LPTKGPTEI 44.392905 478.276538074017 3375574.75 8186.0 ENSG00000177576|ENST00000318240|C18orf32 4.0237696170806885 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8196 44.407 800.0 192990.0 25 0 16234.0 + 44969 YPRELSNSV 9 205 532.7715507283231 1063.528548523446 2 532.7737914919853 MULTI CID FTMS 0 0 0 8186 192020.375 0.8855881427372219 2 -0.1125373840332031 10 Unmodified _YPRELSNSV_ ENSG00000163125|ENST00000369068|RPRD2;ENST00000492220.1_1_1:150381497-150445807:+|nuORF;nc|ENSG00000163125|Q5VT52-2|RPRD2;nc|ENSG00000163125|Q5VT52-3|RPRD2;nc|ENSG00000163125|Q5VT52-5|RPRD2 57.72198328787511 0.0273433238377839 4 [VS]QT[KS]DNSV 10 6 + 52.242 0.0 0.0 4.9121 4.9121 68.664 0.0 0.0 0.0 2.0081143090869773 15.674919357644818 2.0081143090869773 0.6942140875846974 0 0.5 0.8538719643217619 1.0264209843288905 1.0356668758921828 [VS]QT[KS]DNSV;[VS]QTA[TA]SNSV;[QT]P{M(Oxidation (M))|F}[KG]SNSV;[NS]{I|L}T[KS]DNSV;[VS]GAT[KS]DNSV;[NS]{I|L}TA[TA]SNSV;[VS]Q[KC]{I|L}SNSV;[VS]{[WT]|[RM]}[KG]SNSV;{[TV]|[{I|L}S]}NT[KS]DNSV;{[TV]|[{I|L}S]}NTA[TA]SNSV 4.9121;4.8468;4.7233;4.3708;4.3502;4.3055;4.2185;4.2093;4.1213;4.056 -;-;-;-;-;-;-;-;-;- 2667 1 1.764 122889.4 0.8100000023841858 3682 4512 8186 HBL1_DMSO_200M_050219_2,8196 HBL1_DMSO_200M_050219_2,8196,YPRELSNSV True True YPRELSNSV 44.406738 532.773791491985 1780017.0 8186.0 ENST00000492220.1_1_1:150381497-150445807:+|nuORF;;nc|ENSG00000163125|Q5VT52-5|RPRD2;;nc|ENSG00000163125|Q5VT52-3|RPRD2;;nc|ENSG00000163125|Q5VT52-2|RPRD2;;ENSG00000163125|ENST00000369068|RPRD2 4.543347199757894 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8197 44.413 370.0 316930.0 25 0 74069.0 + -1 SEYCTRREQG 10 106 643.2851532874286 1284.555753641657 2 643.2824584841728 MULTI CID FTMS 0 0 0 8186 131366.015625 0.3225648220078532 -2 0.167083740234375 11 Carbamidomethyl (C) _SEYC(Carbamidomethyl (C))TRREQG_ REV__ENST00000530527.5_1_11:17297709-17304375:+|nuORF 9.38312468134398 0.6832340498775793 4 [RV]{I|L}QSE{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}[CS] 11 -1 + 51.417 0.0 0.0 4.0027 4.0027 76.578 0.0 0.0 0.0 17.367585652254178 38.741287440266646 17.367585652254178 9.128498242810991 0 0.3807196863200844 1.0 0.3252574989159953 0.2887254899964357 [RV]{I|L}QSE{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}[CS];[RV]{I|L}[AG]SE{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}[CS] 4.0027;3.2921 -;- 129 1 1.764 87471.4 1.0 3683 4512 8186 HBL1_DMSO_200M_050219_2,8197 HBL1_DMSO_200M_050219_2,8197,SEYCTRREQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8198 44.427 800.0 195000.0 25 0 19521.0 -1 CRFSQCYDYF 10 157 482.5265307569824 1444.5577628711474 3 482.5269042849541 MULTI CID FTMS 0 0 0 8186 124994.7421875 0.7365591407749867 -2 0.167083740234375 12 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))RFSQC(Carbamidomethyl (C))YDYF_ ENST00000309922.6_1_3:101284419-101284533:+|nuORF 3.319642798002388 0.7112812012931492 4 EAQQNA{M(Oxidation (M))|F}Y 8 -1 61.433 0.0 0.0 4.2527 0.0 0.0 475.1403370587906 0.0 475.1403370587906 0.0 44.97933455448525 0.0 0.0 0 0.8182503180159344 0.0 1.024227503252014 0.4247425010840047 EAQQNA{M(Oxidation (M))|F}Y 4.2527 - 577 1 1.764 119967.6 0.6299999952316284 3684 4512 8186 HBL1_DMSO_200M_050219_2,8198 HBL1_DMSO_200M_050219_2,8198,CRFSQCYDYF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8199 44.441 800.0 221860.0 25 0 13496.0 + 8063 ENSSDFQSNIA 11 186 606.2633113670349 1210.5120698008698 2 606.2624389529228 MULTI CID FTMS 0 0 0 8186 110551.8984375 0.4532314865432558 -1 0.0805130004882812 13 Unmodified _ENSSDFQSNIA_ ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 27.22323531849824 0.4529927607131788 4 [NS]QQA[PA]DS{M(Oxidation (M))|F}{M(Oxidation (M))|F} 11 10 + 40.588 0.0 0.0 3.3529 3.3529 63.171 0.0 0.0 0.0 0.5889538379542145 0.5889538379542145 0.5889538379542145 0.5889538379542145 0 0.4247425010840047 0.4436974992327127 0.8494850021680094 0.0 [NS]QQA[PA]DS{M(Oxidation (M))|F}{M(Oxidation (M))|F};[HD]EAQAQND{I|L}A;[NS]Q[HS]EPND{I|L}A;[NS]QQAE[PG]S{M(Oxidation (M))|F}{M(Oxidation (M))|F};[NS]QQA[WP]S{M(Oxidation (M))|F}{M(Oxidation (M))|F};[HD]EAQANQD{I|L}A;[NS][AG]QA[PA]DS{M(Oxidation (M))|F}{M(Oxidation (M))|F};[NS]Q[AG]A[PA]DS{M(Oxidation (M))|F}{M(Oxidation (M))|F};[HD]EAQA[AG]ND{I|L}A;[HD]EA[AG]AQND{I|L}A 3.3529;3.3043;2.8409;2.8156;2.7697;2.7269;2.5988;2.5988;2.5502;2.5502 -;-;-;-;-;-;-;-;-;- 9957 + 1 1.764 127311.0 0.6800000071525574 3685 4512 8186 HBL1_DMSO_200M_050219_2,8199 HBL1_DMSO_200M_050219_2,8199,ENSSDFQSNIA False True ENSSDFQSNIA 44.441053 606.262438952923 1813950.25 8186.0 chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;;ENSG00000169045|ENST00000393432|HNRNPH1;;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 3.5205349922180176 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8201 44.445 18.0 2663600.0 25 0 516540.0 -1 HFIMQWIF 8 80 379.8571889752571 1136.5497375259713 3 379.8572875857353 MULTI CID FTMS 0 0 0 8200 2944707.0 0.8385536116530967 1 -0.0283699035644531 1 Oxidation (M) _HFIM(Oxidation (M))QWIF_ ENST00000526769.3_1_11:6735844-6741409:-|nuORF;nc|ENSG00000254838|Q7Z2Y8|GVINP1 15.847184025352805 0.6768015514314958 4 {[{M(Oxidation (M))|F}H]|[RQ]}[PG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 9 -1 + 35.637 0.0 0.0 3.1356 3.1356 65.161 0.0 0.0 0.0 1.9173027292342224 5.228787452803374 1.9173027292342224 1.9173027292342224 0 0.0 1.0457574905606752 0.0 0.3807196863200844 {[{M(Oxidation (M))|F}H]|[RQ]}[PG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MW{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MWH{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[ET]|[MV]}{[SA]|[TG]}W{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L};{[ET]|[MV]}{[SA]|[TG]}WH{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[ET]|[MV]}[YE][KA]H{M(Oxidation (M))|F}{I|L};{[ET]|[MV]}[HA]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 3.1356;2.9669;2.5471;1.6456;1.2259;0.90038;0.90038 -;-;-;-;-;-;- 118 1 1.764 42621.7 1.0 3686 4513 8200 HBL1_DMSO_200M_050219_2,8201 HBL1_DMSO_200M_050219_2,8201,HFIMQWIF False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 8202 44.447 35.0 1433200.0 25 0 113390.0 + 14395 IFHEKTSEF 9 76 569.282134763268 1136.549716593336 2 569.2828857302666 MULTI CID FTMS 0 0 0 8200 1380650.375 0.7270609412662726 1 -0.0283699035644531 2 Unmodified _IFHEKTSEF_ ENSG00000003989|ENST00000494857|SLC7A2;nc|ENSG00000003989|P52569-2|SLC7A2;nc|ENSG00000003989|P52569-3|SLC7A2 41.8396318013385 0.0653578398400075 4 {I|L}{M(Oxidation (M))|F}HE 4 5 50.477 0.0 0.0 4.4413 0.0 0.0 0.0 607.2715548150999 607.2715548150999 30.001677563697555 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.7742275032520141 0.0 + {I|L}{M(Oxidation (M))|F}HE 4.4413 + + 120 + 1 1.764 42406.5 1.0 3687 4513 8200 HBL1_DMSO_200M_050219_2,8202 HBL1_DMSO_200M_050219_2,8202,IFHEKTSEF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8203 44.45 143.0 772530.0 25 0 61536.0 -1 AYVHMVTHF 9 98 374.1794668738054 1119.5165712216162 3 374.1797057986259 MULTI CID FTMS 0 0 0 8200 513791.1875 0.648226418849544 -2 0.1646804809570312 3 Oxidation (M) _AYVHM(Oxidation (M))VTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 29.84058131909904 0.1515068451768857 4 AYVH{M(Oxidation (M))|F}VTH{M(Oxidation (M))|F} 9 -1 + 72.106 0.0 0.0 6.4408 6.4408 80.635 0.0 0.0 0.0 36.47817481888637 3.679767852945943 3.679767852945943 3.679767852945943 0 0.3054621874040891 2.0 0.0 0.0 AYVH{M(Oxidation (M))|F}VTH{M(Oxidation (M))|F};AYVH{M(Oxidation (M))|F}VT{M(Oxidation (M))|F}H;AYYHSVPH{M(Oxidation (M))|F};AYYHSVP{M(Oxidation (M))|F}H;AYY[YR]TH{M(Oxidation (M))|F};AYY[YR]T{M(Oxidation (M))|F}H;AYVH[HQ][QT]H;AYYHSV[HM]{I|L};AYVH[DN]T{[MG]|[TS]}{I|L};AYY[KQ]{M(Oxidation (M))|F}{[MG]|[TS]}{I|L} 6.4408;6.1121;5.3722;5.0435;4.8823;4.5536;3.8129;3.6867;3.3352;3.1072 +;-;-;-;-;-;-;-;-;- + 247 + 1 1.764 96661.0 1.0 3688 4513 8200 HBL1_DMSO_200M_050219_2,8203 HBL1_DMSO_200M_050219_2,8203,AYVHMVTHF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8204 44.456 336.0 415000.0 25 0 26169.0 34025 SLKDSFQKV 9 172 351.1977967140222 1050.571560742267 3 351.1977722048759 MULTI CID FTMS 0 0 0 8200 148680.28125 0.6001878611094327 -1 0.08416748046875 4 Unmodified _SLKDSFQKV_ ENSG00000213988|ENST00000418063|ZNF90 60.07390631473393 0.0260411565414776 4 {[TV]|[{I|L}S]}KC(Carbamidomethyl (C)){I|L}V 6 5 35.865 0.0 0.0 3.4138 0.0 0.0 0.0 347.1462067749821 347.1462067749821 14.573507628719344 0.0 0.0 0.0 0 0.25 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}KC(Carbamidomethyl (C)){I|L}V 3.4138 - 355 + 1 1.764 116084.8 1.0 3689 4513 8200 HBL1_DMSO_200M_050219_2,8204 HBL1_DMSO_200M_050219_2,8204,SLKDSFQKV True True SIKDSFQKV 44.455611 351.197772204876 1073798.0 8200.0 nc|ENSG00000146757|Q03936-2|ZNF92;;ENSG00000081665|ENST00000540806|ZNF506;;nc|ENSG00000146757|Q03936-3|ZNF92;;nc|ENSG00000081665|Q5JVG8-2|ZNF506;;ENSG00000173041|ENST00000309683|ZNF680;;ENSG00000146757|ENST00000328747|ZNF92;;ENSG00000237440|ENST00000427401|ZNF737 4.127613067626953 3.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8205 44.469 800.0 210230.0 25 0 12229.0 + 20007 LILTGETESY 10 165 563.2852493459861 1124.5559457587722 2 563.2828246951103 MULTI CID FTMS 0 0 0 8200 131474.65625 0.4356988810798468 -2 0.1646804809570312 5 Unmodified _LILTGETESY_ REV__ENSG00000084073|ENST00000372759|ZMPSTE24 30.63653989081413 0.2803493085145199 4 [YQ]{I|L}H{I|L}TTSY 9 -1 + 68.457 0.0 0.0 6.0875 6.0875 88.78 0.0 0.0 0.0 14.501962355242952 14.973024840566469 14.501962355242952 14.501962355242952 0 1.110924374808178 1.5228787452803376 1.3494850021680094 0.3252574989159953 [YQ]{I|L}H{I|L}TTSY;[AG]Y{I|L}H{I|L}TTSY;P{[HG]|PP}{I|L}QDAKPY;[Q{I|L}]YH{I|L}TTSY;[AG]{I|L}YH{I|L}TTSY;P{[HG]|PP}{I|L}QWKPY;[AG]D{I|L}GK{I|L}TTSY;[AG]DAKV{I|L}TTSY;[AG]D{I|L}AVKTTSY;[AG]D{I|L}AKVTTSY 6.0875;4.7979;4.6917;4.3556;4.3216;4.2459;4.1864;4.0996;4.0331;4.0331 -;-;-;-;-;-;-;-;-;- 7721 1 1.764 129373.2 0.7300000190734863 3690 4513 8200 HBL1_DMSO_200M_050219_2,8205 HBL1_DMSO_200M_050219_2,8205,LILTGETESY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8207 44.474 8.1 6812300.0 25 0 637550.0 + 24991 MPPPPPQGV 9 95 460.23852327962805 918.462493626056 2 460.2390319705009 MULTI CID FTMS 0 0 0 8206 7601407.5 0.4101763777188983 56 -4.744239807128906 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 67.03532852164291 0.0222449892513529 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 45.615 0.0 0.0 4.9664 4.9664 78.676 0.0 0.0 0.0 5.8913683087845286 20.789236894265606 5.8913683087845286 7.167730834301061 0 1.4802046884880935 0.0 0.2396518287104437 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;[NP]NPPPQR;{[HG]|PP}NNPPQR;[VG][EP]HPQR;[NP]PNPPQR;[NP]GGPPPQR;{[HG]|PP}NGGPPQR;{[HG]|PP}GGNPPQR;[NP]PGGPPQR;{[HG]|PP}GGGGPPQR 4.9664;4.186;3.7715;3.4939;3.252;3.1776;2.7631;2.7631;2.2436;1.7605 -;-;-;-;-;-;-;-;-;- 303 1 1.764 47477.1 1.0 3691 4514 8206 HBL1_DMSO_200M_050219_2,8207 HBL1_DMSO_200M_050219_2,8207,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8208 44.475 48.0 1033700.0 25 0 98375.0 + 3383 AYQQRVTAL 9 78 525.2899663712622 1048.5653798093242 2 525.2906371951103 MULTI CID FTMS 0 0 0 8206 1126799.5 0.6851471428323866 -1 0.0283699035644531 2 Unmodified _AYQQRVTAL_ ENSG00000135968|ENST00000309863|GCC2;ENST00000393321.2_3_2:109102933-109106471:+|nuORF 66.45667989310934 0.0225072657982126 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQRVTA{I|L} 9 0 + 81.181 0.0 0.0 7.7421 7.7421 91.363 0.0 0.0 0.0 74.19138127225978 14.09256854528806 14.09256854528806 9.208187539523747 0 1.8979400086720373 2.0 0.4247425010840047 0.6861818737241735 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQRVTA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[AG]RVTA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]QRVTA{I|L};KYY[YK]TA{I|L};[TA]{[QN]|[E{I|L}]|[KN]}[MT]VTA{I|L} 7.7421;6.8639;6.8639;3.4951;2.1649 +;-;-;-;- + 176 + 1 1.764 44821.9 1.0 3692 4514 8206 HBL1_DMSO_200M_050219_2,8208 HBL1_DMSO_200M_050219_2,8208,AYQQRVTAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8209 44.478 141.0 378200.0 25 0 56352.0 + 8942 FAMNDESVFY 10 69 611.7595783278656 1221.504603722531 2 611.7604858279228 MULTI CID FTMS 0 0 0 8206 426952.9375 0.168805542453343 4 -0.4205398559570312 3 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 10.823927491677226 0.6659270209832991 4 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 58.148 0.0 0.0 4.7604 4.7604 79.726 0.0 0.0 0.0 7.269987279362624 41.15865011156764 7.269987279362624 9.164539485499256 0 0.8935078169319297 0.0 0.0 0.3807196863200844 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;[TP][NS]NQ[HD]{M(Oxidation (M))|F}Y;[QA]E[HD]QNA{M(Oxidation (M))|F}Y;[TP][WE]Q[HD]{M(Oxidation (M))|F}Y 4.7604;4.0101;4.0101;4.0101;3.2628;3.2628;3.2628;3.0844;2.7799;2.5496 -;-;-;-;-;-;-;-;-;- 299 1 1.764 47605.2 1.0 3693 4514 8206 HBL1_DMSO_200M_050219_2,8209 HBL1_DMSO_200M_050219_2,8209,FAMNDESVFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8210 44.481 170.0 308120.0 25 0 35076.0 + -1 ICFNTDEAAFY 11 85 675.7881282387648 1349.5617035443297 2 675.7888061404228 MULTI CID FTMS 0 0 0 8206 415343.9375 0.3804455702312911 3 -0.287689208984375 4 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FNTDEAAFY_ REV__ENSG00000163746|ENST00000696113|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7-3|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7|PLSCR2 22.736283301280096 0.5583477779825423 4 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA[Y{M(Oxidation (M))|F}] 11 -1 + 72.612 0.0 0.0 5.3804 5.3804 82.101 0.0 0.0 0.0 3.589997858903658 43.73767645865766 3.589997858903658 9.128498242811006 0 0.5 0.0 1.8098943791441968 2.2302046884880937 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}[HS]GGQQNA[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}[HS]N[AG]QNA[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}[HS]NQ[AG]NA[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}[HS]NQQGGA[Y{M(Oxidation (M))|F}];[YQ]{[QC]|[C(Carbamidomethyl (C))A]}[VS]QNA[Y{M(Oxidation (M))|F}] 5.3804;4.704;4.704;4.704;4.704;3.1593 -;-;-;-;-;- 717 1 1.764 43676.2 1.0 3694 4514 8206 HBL1_DMSO_200M_050219_2,8210 HBL1_DMSO_200M_050219_2,8210,ICFNTDEAAFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8211 44.485 173.0 610780.0 25 0 78419.0 + 35933 SVPEKIERI 9 92 357.54478077209086 0 357.5446960330009 PEAK CID FTMS 0 0 0 8206 400811.0625 0.8768576034478279 1 -0.0701141357421875 5 Unmodified _SVPEKIERI_ ENSG00000078177|ENST00000261435|N4BP2;nc|ENSG00000078177|Q86UW6-2|N4BP2 23.78978130925829 0.1667157386347964 4 K{I|L}E 3 6 12.703 0.0 0.0 1.7814 0.0 0.0 55.65649361801065 284.17279993228755 339.8292935502982 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K{I|L}E 1.7814 + + 16 + 1 1.764 96925.3 1.0 3695 4514 8206 HBL1_DMSO_200M_050219_2,8211 HBL1_DMSO_200M_050219_2,8211,SVPEKIERI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8212 44.487 127.0 436640.0 25 0 85536.0 + 21240 LPDKGQKLI 9 82 337.8781051567177 1010.6124860703532 3 337.8777953982353 MULTI CID FTMS 0 0 0 8206 380173.25 0.0822270632372122 10 -0.9858512878417968 6 Unmodified _LPDKGQKLI_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 22.736283301280096 0.2418982879461534 4 [DP]K{[QG]|[NA]}K{I|L} 7 2 36.259 0.0 0.0 3.5878 0.0 0.0 0.0 241.15423765150948 241.15423765150948 15.290003832308445 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.3807196863200844 0.0 + [DP]K{[QG]|[NA]}K{I|L} 3.5878 + + 107 1 1.764 52090.4 1.0 3696 4514 8206 HBL1_DMSO_200M_050219_2,8212 HBL1_DMSO_200M_050219_2,8212,LPDKGQKLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8213 44.49 140.0 375840.0 25 0 32621.0 + 2884 AVELPQLTV 9 82 485.2843926959607 968.5542324587212 2 485.2845947146416 MULTI CID FTMS 0 0 0 8206 311194.9375 0.9067299644600942 3 -0.287689208984375 7 Unmodified _AVELPQLTV_ REV__ENSG00000111046|ENST00000228641|MYF6 16.942295170755138 0.3780752226737986 4 [{I|L}V][{M(Oxidation (M))|F}V]EV 6 -1 29.934 0.0 0.0 3.0906 0.0 0.0 0.0 279.1468599908813 279.1468599908813 16.438937347570075 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}V][{M(Oxidation (M))|F}V]EV 3.0906 - 86 + 1 1.764 46394.4 1.0 3697 4514 8206 HBL1_DMSO_200M_050219_2,8213 HBL1_DMSO_200M_050219_2,8213,AVELPQLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8214 44.504 800.0 281090.0 25 0 17927.0 + 43229 WAPIRDGASI 10 230 362.5294940101128 1084.5666526305386 3 362.5290710330009 MULTI CID FTMS 0 0 0 8206 166589.28125 0.0550260064981769 27 -2.3096961975097656 8 Unmodified _WAPIRDGASI_ REV__ENSG00000144369|ENST00000304698|FAM171B;REV__nc|ENSG00000144369|Q6P995-2|FAM171B 29.081581746732265 0.3152867722954398 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 5 -1 47.817 0.0 0.0 4.4089 0.0 0.0 0.0 470.2381075494751 470.2381075494751 29.85863111416478 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.3494850021680094 0.3252574989159953 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEK 4.4089 - 368 + 1 1.764 182128.7 0.6299999952316284 3698 4514 8206 HBL1_DMSO_200M_050219_2,8214 HBL1_DMSO_200M_050219_2,8214,WAPIRDGASI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8215 44.512 443.0 210250.0 25 0 45334.0 + 38846 TVIEDCNKV 9 112 510.7551812268803 1019.4958095205608 2 510.7554199099541 MULTI CID FTMS 0 0 0 8206 164576.0 1.0 0 0.0 9 Unmodified _TVIEDCNKV_ ENSG00000143228|ENST00000271452|NUF2 62.57269311338072 0.0246576765497938 4 {[TV]|[{I|L}S]}{I|L}EDCNKV 9 0 + 77.414 0.0 0.0 7.5933 7.5933 90.988 0.0 0.0 0.0 48.6977591736112 10.55571873260216 10.55571873260216 9.208187539523747 0 0.6989700043360187 2.0 0.75 1.2971062485323517 + + {[TV]|[{I|L}S]}{I|L}EDCNKV;{[TV]|[{I|L}S]}{I|L}EDCGGKV;{[TV]|[{I|L}S]}{I|L}ED[{M(Oxidation (M))|F}T]PV;{[TV]|[{I|L}S]}{I|L}ED{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L};{[TV]|[{I|L}S]}{I|L}[PS]{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}][YK]TV;{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}][YK]S{I|L};{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}][YT]KV;{[TV]|[{I|L}S]}{[QG]|[NA]}[C(Carbamidomethyl (C))K]E[KA];{[TV]|[{I|L}S]}{[QG]|[NA]}[C(Carbamidomethyl (C))K]P[KC] 7.5933;6.6901;5.2451;4.7837;4.0679;3.4501;3.3616;3.3473;2.1413;2.0187 +;-;-;-;-;-;-;-;-;- + 492 + 1 1.764 78616.7 1.0 3699 4514 8206 HBL1_DMSO_200M_050219_2,8215 HBL1_DMSO_200M_050219_2,8215,TVIEDCNKV True True TVIEDCNKV 44.511798 510.755419909954 951923.4375 8206.0 ENSG00000143228|ENST00000271452|NUF2 7.599233627319336 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8216 44.526 800.0 68418.0 25 0 5596.1 + -1 WTCTNAMMMCM 11 94 755.7504250088167 1509.486297084433 2 755.7531005740166 MULTI CID FTMS 0 0 0 8206 118690.265625 1.0 0 0.0 10 Acetyl (Protein N-term),2 Carbamidomethyl (C),2 Oxidation (M) _(Acetyl (Protein N-term))WTC(Carbamidomethyl (C))TNAM(Oxidation (M))M(Oxidation (M))MC(Carbamidomethyl (C))M_ REV__ENST00000531382.5_1_1:26887623-26888029:+|nuORF 0.3070304955306653 0.8736993455979228 4 {[{M(Oxidation (M))|F}D]|MM}TANQQA 8 -1 29.685 0.0 0.0 1.9666 0.0 0.0 0.0 631.1209200494749 631.1209200494749 16.497519816658368 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}D]|MM}TANQQA 1.9666 - 126 + 1 1.764 43812.1 0.6899999976158142 3700 4514 8206 HBL1_DMSO_200M_050219_2,8216 HBL1_DMSO_200M_050219_2,8216,WTCTNAMMMCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8217 44.539 800.0 126740.0 25 0 10586.0 + 4608 DAYTKKELI 9 130 540.8001570186357 1079.5857611040713 2 540.8006469607353 MULTI CID FTMS 0 0 0 8206 116815.359375 0.0649960398245921 5 -0.5116806030273438 11 Unmodified _DAYTKKELI_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 47.594388314883695 0.0456443387682827 4 DAYTK 5 4 53.008 0.0 0.0 4.9101 0.0 0.0 0.0 498.2935885065063 498.2935885065063 6.654921997787113 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.2742275032520141 0.0 + DAYTK 4.9101 + + 670 + 1 1.764 86546.6 0.7099999785423279 3701 4514 8206 HBL1_DMSO_200M_050219_2,8217 HBL1_DMSO_200M_050219_2,8217,DAYTKKELI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8219 44.544 19.0 3118300.0 25 0 585150.0 -1 0 69 490.2855722616303 489.2782957950303 1 490.2859374880791 MULTI CID FTMS 0 0 0 8218 3601650.25 0.9178307529790826 1 -0.1067848205566406 1 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.763 49698.1 1.0 3702 4515 8218 HBL1_DMSO_200M_050219_2,8219 HBL1_DMSO_200M_050219_2,8219, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8220 44.546 120.0 414200.0 25 0 34595.0 + 37030 TFSNQAESM 9 87 507.713161538349 1013.411770143498 2 507.7136108279228 MULTI CID FTMS 0 0 0 8218 331474.1875 0.0226656564563893 7 -0.7301902770996094 2 Unmodified _TFSNQAESM_ ENSG00000133958|ENST00000695012|UNC79;nc|ENSG00000133958|Q9P2D8-2|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;nc|ENSG00000133958|Q9P2D8|UNC79 12.531546534597751 0.4974689918368763 4 PV[YN]QVM 7 6 22.184 0.0 0.0 2.189 0.0 0.0 164.00230746732137 0.0 164.00230746732137 0.0 10.194182131708304 0.0 0.0 0 0.0 0.0 0.0 0.0 PV[YN]QVM 2.189 - 217 + 1 1.763 46606.3 1.0 3703 4515 8218 HBL1_DMSO_200M_050219_2,8220 HBL1_DMSO_200M_050219_2,8220,TFSNQAESM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8221 44.548 35.0 2536000.0 25 0 236180.0 + 4140 DAPHPLSKI 9 93 326.5186994585964 976.5342689759892 3 326.5185729861259 MULTI CID FTMS 0 0 0 8218 1466904.75 0.8347789381613853 -1 0.0701141357421875 3 Unmodified _DAPHPLSKI_ ENSG00000180304|ENST00000326005|OAZ2;ENST00000560837.5_1_15:64982571-64983740:-|nuORF 20.41453444215458 0.284085796332423 4 {I|L}PSK{I|L} 5 5 23.056 0.0 0.0 2.3611 0.0 0.0 420.1749112065225 0.0 420.1749112065225 0.0 11.897841593004973 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 {I|L}PSK{I|L} 2.3611 - 59 + 1 1.763 75168.7 1.0 3704 4515 8218 HBL1_DMSO_200M_050219_2,8221 HBL1_DMSO_200M_050219_2,8221,DAPHPLSKI False True DAPHPLSKI 44.547621 326.518572986126 27958481.0 8218.0 ENST00000560837.5_1_15:64982571-64983740:-|nuORF;;ENSG00000180304|ENST00000326005|OAZ2 4.42242447535197 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8222 44.55 99.0 765920.0 25 0 107400.0 + 13601 HPMPRVNEI 9 94 546.7840750960592 1091.5535972589182 2 546.7850219607353 MULTI CID FTMS 0 0 0 8218 598258.3125 1.0 0 0.0 4 Unmodified _HPMPRVNEI_ ENSG00000084774|ENST00000264705|CAD 12.240655878213236 0.5053430591993562 4 HPM{I|L} 4 5 43.047 0.0 0.0 3.9437 0.0 0.0 0.0 610.2946871393186 610.2946871393186 26.453650195120844 0.0 0.0 0.0 0 1.110924374808178 0.0 0.0 0.0 HPM{I|L} 3.9437 - 89 + 1 1.763 60885.4 1.0 3705 4515 8218 HBL1_DMSO_200M_050219_2,8222 HBL1_DMSO_200M_050219_2,8222,HPMPRVNEI False True HPMPRVNEI 44.549773 546.785021960735 6518780.5 8218.0 ENSG00000084774|ENST00000264705|CAD 4.187028249104817 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8223 44.553 137.0 417770.0 25 0 42258.0 + 3667 DAENAMRYI 9 90 549.7459425205411 1097.477332107882 2 549.7480346560478 MULTI CID FTMS 0 0 0 8218 460324.96875 0.5619231717334895 -2 0.0984840393066406 5 Oxidation (M) _DAENAM(Oxidation (M))RYI_ ENSG00000114503|ENST00000321256|NCBP2;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;ENST00000479647.1_1_3:196664263-196668636:-|nuORF;nc|ENSG00000114503|P52298-2|NCBP2 47.74868867922204 0.0453060283459952 4 {[DA]|[EG]}ENA{M(Oxidation (M))|F}R{I|L}Y 9 2 + 69.513 0.0 0.0 6.3339 6.3339 74.598 0.0 0.0 0.0 19.55909798898422 0.72550667148613 0.72550667148613 0.72550667148613 0 0.8494850021680094 2.0 0.0 0.3807196863200844 {[DA]|[EG]}ENA{M(Oxidation (M))|F}R{I|L}Y;{[DA]|[EG]}ENA{M(Oxidation (M))|F}RY{I|L};{[DA]|[EG]}EGGA{M(Oxidation (M))|F}R{I|L}Y;{[DA]|[EG]}EGGA{M(Oxidation (M))|F}RY{I|L};{[DA]|[EG]}ENA{M(Oxidation (M))|F}[HV][VP];{[DA]|[EG]}EGGA{M(Oxidation (M))|F}[HV][VP];{[DA]|[EG]}EN[YV][QP]Y;{[DA]|[EG]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][PG]R{I|L}Y;{[{M(Oxidation (M))|F}C]|[YS]}EN[PG]R{I|L}Y;{[DA]|[EG]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][PG]RY{I|L} 6.3339;6.2678;5.4948;5.4287;5.3721;4.1901;3.6234;2.6188;2.5775;2.5527 -;+;-;-;-;-;-;-;-;- + 300 + 1 1.763 46240.8 1.0 3706 4515 8218 HBL1_DMSO_200M_050219_2,8223 HBL1_DMSO_200M_050219_2,8223,DAENAMRYI True False DAENAMRYI 44.552552 549.748034656048 8610836.0 8218.0 ENST00000479647.1_1_3:196664263-196668636:-|nuORF;;ENSG00000114503|ENST00000321256|NCBP2;;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;;nc|ENSG00000114503|P52298-2|NCBP2 7.945681889851888 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8224 44.556 154.0 509070.0 25 0 43382.0 + -1 PGGAGCPD 8 80 730.2809830557586 729.2737065891586 1 730.2819091677666 MULTI CID FTMS 0 0 0 8218 327578.8125 0.2913523199684081 2 -0.2175750732421875 6 Carbamidomethyl (C) _PGGAGC(Carbamidomethyl (C))PD_ REV__ENST00000254846.9_1_17:7752365-7752407:+|nuORF 0.7936320650641473 0.8195151834710337 4 EM 2 -1 20.969 0.0 0.0 2.8753 0.0 0.0 451.18260390449376 0.0 451.18260390449376 0.0 4.771212547196626 0.0 0.0 0 0.0 0.0 0.0 0.0 EM 2.8753 - 101 1 1.763 62767.6 1.0 3707 4515 8218 HBL1_DMSO_200M_050219_2,8224 HBL1_DMSO_200M_050219_2,8224,PGGAGCPD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8225 44.559 148.0 399100.0 25 0 25770.0 + -1 CVNMQTASV 9 106 505.22408645478106 1008.433619976362 2 505.2246581912041 MULTI CID FTMS 0 0 0 8218 308471.15625 0.9989629932183176 -2 0.0984840393066406 7 Carbamidomethyl (C) _C(Carbamidomethyl (C))VNMQTASV_ REV__ENSG00000042781|ENST00000307340|USH2A;REV__nc|ENSG00000042781|O75445-3|USH2A 10.073929032068715 0.563993802247229 4 [{I|L}P]{[CP]|[EA]}[YC(Carbamidomethyl (C))]ASV 9 -1 [{I|L}P]{[CP]|[EA]}[YC(Carbamidomethyl (C))]A + + 19.253 7.8601 0.97723 1.9091 1.9091 44.511 0.0 0.0 0.0 0.0 6.63039737402158 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 [{I|L}P]{[CP]|[EA]}[YC(Carbamidomethyl (C))]ASV 1.9091 - 217 + 1 1.763 48509.2 1.0 3708 4515 8218 HBL1_DMSO_200M_050219_2,8225 HBL1_DMSO_200M_050219_2,8225,CVNMQTASV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8226 44.561 120.0 350200.0 25 0 22807.0 + 3414 AYVHMVTHF 9 76 560.765515969227 0 560.7662231326103 PEAK CID FTMS 0 0 0 8218 247006.390625 1.0 0 0.0 8 Oxidation (M) _AYVHM(Oxidation (M))VTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 42.09456458481378 0.053291022336892 4 VH{M(Oxidation (M))|F}VTG 6 4 26.508 0.0 0.0 2.3678 0.0 0.0 234.1014381760457 242.09087549381096 476.19231366985673 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 VH{M(Oxidation (M))|F}VTG 2.3678 - 192 + 1 1.763 37596.3 1.0 3709 4515 8218 HBL1_DMSO_200M_050219_2,8226 HBL1_DMSO_200M_050219_2,8226,AYVHMVTHF True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8227 44.566 271.0 434700.0 25 0 32604.0 + -1 AFFIMIDAQ 9 119 536.2647973375446 1070.515041741889 2 536.2651244997978 MULTI CID FTMS 0 0 0 8218 249301.34375 1.0 0 0.0 9 Oxidation (M) _AFFIM(Oxidation (M))IDAQ_ REV__ENSG00000157227|ENST00000311852|MMP14 21.74664581756881 0.2544899275067181 4 {[MS]|[{M(Oxidation (M))|F}A]}NSQTRT{M(Oxidation (M))|F} 9 -1 + 45.508 0.0 0.0 4.2511 4.2511 78.532 0.0 0.0 0.0 32.87044863270039 6.827417515368438 6.827417515368438 9.208187539523747 0 0.805462187404089 0.0 0.5387254899964358 0.3807196863200844 {[MS]|[{M(Oxidation (M))|F}A]}NSQTRT{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}NS[AG]TRT{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}GGSQTRT{M(Oxidation (M))|F};[EP][PA]KESN{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}NSEKQT{M(Oxidation (M))|F};[VS][HV]TQS[WQ];{[MS]|[{M(Oxidation (M))|F}A]}NSQT[HV][PA];{[MS]|[{M(Oxidation (M))|F}A]}GGS[AG]TRT{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V[YK]SN{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}N[C(Carbamidomethyl (C))R]RT{M(Oxidation (M))|F} 4.2511;3.3909;3.3909;3.1552;3.1525;2.7666;2.7293;2.5348;2.4742;2.4568 -;-;-;-;-;-;-;-;-;- 448 + 1 1.763 91686.6 1.0 3710 4515 8218 HBL1_DMSO_200M_050219_2,8227 HBL1_DMSO_200M_050219_2,8227,AFFIMIDAQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8228 44.58 800.0 161920.0 25 0 11918.0 25416 NEAYSLYEHFY 11 120 718.3113472274521 1434.608141521704 2 718.3156616091728 MULTI CID FTMS 0 0 0 8218 188421.65625 0.6035645133084153 -7 0.5905265808105469 10 Unmodified _NEAYSLYEHFY_ ENSG00000091879|ENST00000629816|ANGPT2;nc|ENSG00000091879|O15123-2|ANGPT2;nc|ENSG00000091879|O15123|ANGPT2 24.99096001346401 0.505407273373304 4 ANQQAEH{M(Oxidation (M))|F}Y 9 6 82.899 0.0 0.0 5.7785 0.0 0.0 328.1333540972328 0.0 328.1333540972328 0.0 37.7472712837649 0.0 0.0 0 0.7059771852360797 0.0 0.3494850021680094 1.1989700043360187 ANQQAEH{M(Oxidation (M))|F}Y 5.7785 - 4648 + 1 1.763 94969.5 0.8500000238418579 3711 4515 8218 HBL1_DMSO_200M_050219_2,8228 HBL1_DMSO_200M_050219_2,8228,NEAYSLYEHFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8229 44.594 800.0 101580.0 25 0 49875.0 -1 0 62 663.3012483428517 662.2939718762517 1 663.3033325076103 MULTI CID FTMS 0 0 0 8218 154798.234375 0.8981854492333851 3 -0.3504257202148437 11 4 {[CP]|[EA]}VPT{M(Oxidation (M))|F} 6 -1 + 43.517 0.0 0.0 6.5707 6.5707 90.068 0.0 0.0 0.0 4.655593552960937 4.655593552960937 4.655593552960937 12.66589350960075 0 1.579689690656103 0.0 0.805462187404089 0.0 {[CP]|[EA]}VPT{M(Oxidation (M))|F};[TP]TPT{M(Oxidation (M))|F};{[CP]|[EA]}[TP]V{M(Oxidation (M))|F};{[CP]|[EA]}E{M(Oxidation (M))|F}[PA];[TP]{M(Oxidation (M))|F}V{[CP]|[EA]};[TP]{[CP]|[EA]}V{M(Oxidation (M))|F};[VS][DP]V{M(Oxidation (M))|F};[PS][DV]V{M(Oxidation (M))|F} 6.5707;4.6583;2.4483;2.3347;1.7944;1.2388;0.18342;0.12092 -;-;-;-;-;-;-;- 68 + 1 1.763 67861.7 0.7900000214576721 3712 4515 8218 HBL1_DMSO_200M_050219_2,8229 HBL1_DMSO_200M_050219_2,8229, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8230 44.6 342.0 244100.0 25 0 14788.0 -1 0 125 543.3009218374228 542.2936453708228 1 543.3019897341728 MULTI CID FTMS 0 0 0 8218 156611.984375 0.0322824511461248 -18 1.1575546264648438 12 4 V 1 -1 9.8329 0.0 0.0 1.8132 0.0 0.0 425.21434346828215 0.0 425.21434346828215 0.0 0.3959062302381237 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.8132 - 34 + 1 1.763 72326.7 1.0 3713 4515 8218 HBL1_DMSO_200M_050219_2,8230 HBL1_DMSO_200M_050219_2,8230, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8231 44.603 178.0 336290.0 25 0 29871.0 + -1 PVMLLDSL 8 93 452.2469644033468 0 452.2461120486259 PEAK CID FTMS 0 0 0 8218 125575.7578125 0.2598390894202792 3 -0.3504257202148437 13 Oxidation (M) _PVM(Oxidation (M))LLDSL_ REV__ENST00000558573.1_1_15:44968716-45003494:-|nuORF 10.183394434864962 0.5394990767616434 4 D 1 -1 4.8464 0.0 0.0 0.53701 0.0 0.0 684.3518714563046 100.07744775943593 784.4293192157405 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1747425010840047 0.0 D 0.53701 + + 64 + 1 1.763 50609.2 1.0 3714 4515 8218 HBL1_DMSO_200M_050219_2,8231 HBL1_DMSO_200M_050219_2,8231,PVMLLDSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8232 44.618 800.0 77076.0 25 0 5026.7 -1 MSSDTEMEVF 10 125 596.2310513598985 1190.447549786597 2 596.2327758669853 MULTI CID FTMS 0 0 0 8218 110704.8359375 1.0 0 0.0 14 Oxidation (M) _M(Oxidation (M))SSDTEMEVF_ ENSG00000109063|ENST00000583535|MYH3 3.944395688203298 0.708391353636983 4 NQQV{M(Oxidation (M))|F} 5 -1 31.37 0.0 0.0 2.6352 0.0 0.0 556.1434803693375 0.0 556.1434803693375 0.0 15.885540741363188 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.8494850021680094 NQQV{M(Oxidation (M))|F} 2.6352 - 54 1 1.763 48019.6 0.7200000286102295 3715 4515 8218 HBL1_DMSO_200M_050219_2,8232 HBL1_DMSO_200M_050219_2,8232,MSSDTEMEVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8233 44.632 800.0 381520.0 25 0 53384.0 27556 PLAGHLAL 8 201 396.24172537731727 790.4688978214346 2 396.2418395876884 MULTI CID FTMS 0 0 0 8218 90747.859375 0.9646067502972324 -1 0.0701141357421875 15 Unmodified _PLAGHLAL_ ENSG00000142910|ENST00000271064|TINAGL1;ENST00000466998.1_1_1:32042169-32043067:+|nuORF;ENST00000481165.5_1_1:32042638-32048843:+|nuORF;nc|ENSG00000142910|Q9GZM7-3|TINAGL1 17.086550045450526 0.6584923310065985 4 PH{I|L}PSK{I|L} 7 6 + 78.282 0.0 0.0 9.9032 9.9032 87.266 0.0 0.0 0.0 38.71260043043471 12.825382125373965 12.825382125373965 3.750612633917001 0 0.8807196863200843 1.3979400086720375 1.2302046884880935 0.1747425010840047 PH{I|L}PSK{I|L};PHP{I|L}SK{I|L};PH{I|L}P{I|L}[KS];PHP{I|L}{I|L}[KS];{I|L}SM{I|L}SK{I|L};{I|L}SM{I|L}{I|L}[KS] 9.9032;9.4288;7.9426;7.4681;4.1095;2.1488 -;-;-;-;-;- 227 + 1 1.763 235204.8 0.449999988079071 3716 4515 8218 HBL1_DMSO_200M_050219_2,8233 HBL1_DMSO_200M_050219_2,8233,PLAGHLAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8234 44.646 800.0 238690.0 25 0 17779.0 + 12183 GQQEITNRL 9 187 529.7829491145532 0 529.7831298708916 PEAK CID FTMS 0 0 0 8218 89947.828125 0.9284804563676792 1 -0.1067848205566406 16 Unmodified _GQQEITNRL_ ENSG00000183486|ENST00000330714|MX2;ENST00000482953.5_1_21:42762449-42780157:+|nuORF 57.72198328787511 0.0192479126618854 4 QE{I|L}T 4 5 33.972 0.0 0.0 3.2123 0.0 0.0 185.078742676187 398.21552454166255 583.2942672178496 0.0 0.0 0.0 0.0 0 1.1307196863200843 0.0 0.3494850021680094 0.3252574989159953 + QE{I|L}T 3.2123 + + 310 + 1 1.763 146443.5 0.550000011920929 3717 4515 8218 HBL1_DMSO_200M_050219_2,8234 HBL1_DMSO_200M_050219_2,8234,GQQEITNRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8236 44.651 6.6 5029400.0 25 0 564830.0 8634 EVEEDEYKAFY 11 54 711.3065774151316 1420.5986018970632 2 711.3088256716728 MULTI CID FTMS 0 0 0 8235 6086724.0 0.2378007972684994 2 -0.2436408996582031 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 8.155526934196011 0.8366696279279818 4 [QA]HDEAQQNA{M(Oxidation (M))|F}Y 12 8 + 65.8 0.0 0.0 4.6318 4.6318 71.987 0.0 0.0 0.0 8.99674684468792 48.81018788957242 8.99674684468792 3.0102999566398125 0 0.8935078169319297 0.0 0.0 0.7302046884880937 [QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QNA{M(Oxidation (M))|F}Y;[QA]E[HD]AQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQGGQA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]NQA{M(Oxidation (M))|F}Y;[QA]HDEAQN[AG]A{M(Oxidation (M))|F}Y;[QA]E[HD]AQNQA{M(Oxidation (M))|F}Y 4.6318;4.4199;3.9914;3.9914;3.9914;3.8076;3.7795;3.7795;3.7795;3.5957 -;-;-;-;-;-;-;-;-;- 687 1 1.763 31325.5 1.0 3718 4516 8235 HBL1_DMSO_200M_050219_2,8236 HBL1_DMSO_200M_050219_2,8236,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8237 44.652 51.0 996770.0 25 0 85390.0 + 41639 VPPPSAQEI 9 96 469.2527500155162 936.4909470978324 2 469.2532226443291 MULTI CID FTMS 0 0 0 8235 1046705.6875 0.1900697041033732 9 -0.8936614990234375 2 Unmodified _VPPPSAQEI_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 29.081581746732265 0.1611639662936252 4 AAVQE{I|L} 6 6 30.878 0.0 0.0 3.2972 0.0 0.0 307.1548329084 0.0 307.1548329084 0.0 19.619303010596205 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 AAVQE{I|L} 3.2972 - 225 1 1.763 44336.7 1.0 3719 4516 8235 HBL1_DMSO_200M_050219_2,8237 HBL1_DMSO_200M_050219_2,8237,VPPPSAQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8238 44.653 30.0 2865600.0 25 0 349890.0 + 12944 HAFKISKI 8 94 315.1956329921905 942.5650695767716 3 315.1955139040947 MULTI CID FTMS 0 0 0 8235 1719426.25 0.1392238168038816 -2 0.1768989562988281 3 Unmodified _HAFKISKI_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4 34.10243960390752 0.3329570729325616 4 [HA]{M(Oxidation (M))|F}K{I|L}SK{I|L} 8 0 + 44.633 0.0 0.0 4.7353 4.7353 84.914 0.0 0.0 0.0 15.05850998962318 10.094953548720936 10.094953548720936 30.96910013008056 0 0.9049471895720984 1.3979400086720375 0.0 0.0 + + [HA]{M(Oxidation (M))|F}K{I|L}SK{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HA]{I|L}SK{I|L} 4.7353;1.4496 +;- + 96 1 1.763 73107.8 1.0 3720 4516 8235 HBL1_DMSO_200M_050219_2,8238 HBL1_DMSO_200M_050219_2,8238,HAFKISKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8239 44.654 38.0 1554000.0 25 0 293040.0 + 36430 SYYGNRAATL 10 66 558.2767557622622 1114.5389585913242 2 558.2779418826103 MULTI CID FTMS 0 0 0 8235 1464780.625 0.918062697874296 -1 0.1067848205566406 4 Unmodified _SYYGNRAATL_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 47.594388314883695 0.0942698883389255 4 {[{M(Oxidation (M))|F}C]|[YS]}YG[{I|L}V]{[CP]|[EA]}T{I|L} 10 3 + 35.313 0.0 0.0 3.1684 3.1684 76.816 0.0 0.0 0.0 8.851270583960144 6.085879570257248 6.085879570257248 10.802185451867588 0 1.274227503252014 0.0 0.9436726795685342 0.0 {[{M(Oxidation (M))|F}C]|[YS]}YG[{I|L}V]{[CP]|[EA]}T{I|L};[{I|L}T]{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}V]GY[MT];[HM]{I|L}T{[CP]|[EA]}{[CP]|[EA]}T{I|L};[{I|L}T]{[MS]|[{M(Oxidation (M))|F}A]}{[CP]|[EA]}T{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 3.1684;2.1992;1.973;1.0038 -;-;-;- 69 + 1 1.763 49134.4 1.0 3721 4516 8235 HBL1_DMSO_200M_050219_2,8239 HBL1_DMSO_200M_050219_2,8239,SYYGNRAATL True True SYYGNRAATL 44.654451 558.27794188261 13047401.0 8235.0 ENSG00000168259|ENST00000457167|DNAJC7;;nc|ENSG00000168259|Q99615-2|DNAJC7 5.9081711769104 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8240 44.656 67.0 787010.0 25 0 48105.0 + 41962 VQLHHWQR 8 80 552.2957547233497 1102.5769565134992 2 552.2969238162041 MULTI CID FTMS 0 0 0 8235 902834.125 0.7898878621230584 1 -0.1107902526855468 5 Unmodified _VQLHHWQR_ REV__CON__Q8N1A0;REV__ENSG00000213424|ENST00000394052|KRT222;REV__ENST00000581564.1_1_17:38813911-38818272:-|nuORF;REV__nc|ENSG00000264058|Q8N1A0-2|KRT222 30.22481116460888 0.4082965392918993 4 VAG{I|L}ME[R{M(Oxidation (M))|F}]N 9 -1 81.406 0.0 0.0 7.3832 0.0 0.0 0.0 82.06687341861561 82.06687341861561 70.29676584209078 0.0 0.0 0.0 0 0.9802046884880936 1.6989700043360187 0.0 0.6989700043360187 VAG{I|L}ME[R{M(Oxidation (M))|F}]N 7.3832 - 409 + 1 1.763 47720.5 1.0 3722 4516 8235 HBL1_DMSO_200M_050219_2,8240 HBL1_DMSO_200M_050219_2,8240,VQLHHWQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8241 44.658 95.0 694640.0 25 0 157800.0 + 39133 TYIDKSTQL 9 96 534.7818510744078 1067.5491492156154 2 534.7822753787041 MULTI CID FTMS 0 0 0 8235 544300.9375 0.1987696742563952 -2 0.1768989562988281 6 Unmodified _TYIDKSTQL_ ENSG00000119965|ENST00000481909|C10orf88 43.85829265575387 0.0542763391141878 4 [YT]{I|L}D 4 5 48.188 0.0 0.0 4.5139 0.0 0.0 0.0 572.3031710260374 572.3031710260374 13.00612010228214 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7742275032520141 0.0 + [YT]{I|L}D 4.5139 + + 542 + 1 1.763 55983.3 1.0 3723 4516 8235 HBL1_DMSO_200M_050219_2,8241 HBL1_DMSO_200M_050219_2,8241,TYIDKSTQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8242 44.66 101.0 498020.0 25 0 70049.0 -1 CRPFEESGTCK 11 61 657.2826858974448 1312.5508188616895 2 657.2839843630791 MULTI CID FTMS 0 0 0 8235 533391.8125 0.4505200560624817 1 -0.1107902526855468 7 Carbamidomethyl (C) _C(Carbamidomethyl (C))RPFEESGTCK_ ENSG00000152518|ENST00000282388|ZFP36L2 7.101721422024254 0.8416415510090076 4 SSVET{I|L} 6 -1 39.954 0.0 0.0 3.044 0.0 0.0 320.15587364860204 373.06589685611567 693.2217705047177 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 SSVET{I|L} 3.044 - 303 + 1 1.763 42177.9 1.0 3724 4516 8235 HBL1_DMSO_200M_050219_2,8242 HBL1_DMSO_200M_050219_2,8242,CRPFEESGTCK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8243 44.663 106.0 815220.0 25 0 113150.0 14623 IIIKYLMF 8 86 347.545169468385 1039.613679005355 3 347.5451232790947 MULTI CID FTMS 0 0 0 8235 393861.15625 0.7220287107587893 2 -0.2436408996582031 8 Unmodified _IIIKYLMF_ ENSG00000170175|ENST00000306071|CHRNB1;ENST00000573209.1_1_17:7350776-7358776:+|nuORF;nc|ENSG00000170175|P11230-2|CHRNB1 13.90604991867851 0.7054780292895731 4 {I|L}{I|L} 2 6 30.555 0.0 0.0 2.9391 0.0 0.0 0.0 810.4231717008269 810.4231717008269 9.128498242811002 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 + {I|L}{I|L} 2.9391 + + 71 + 1 1.763 76618.6 1.0 3725 4516 8235 HBL1_DMSO_200M_050219_2,8243 HBL1_DMSO_200M_050219_2,8243,IIIKYLMF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8244 44.665 130.0 395220.0 25 0 45455.0 + 24814 MPKAGYSSI 9 84 477.2414632000172 952.4683734668344 2 477.2420226931572 MULTI CID FTMS 0 0 0 8235 366598.3125 0.780885081719329 -1 0.1067848205566406 9 Unmodified _MPKAGYSSI_ ENSG00000181381|ENST00000682922|DDX60L;ENST00000515088.5_1_4:169391961-169393850:-|nuORF;nc|ENSG00000181381|Q5H9U9-2|DDX60L 24.020572477871973 0.2255576514309169 4 MP 2 7 32.053 0.0 0.0 3.3652 0.0 0.0 0.0 721.3496798150999 721.3496798150999 2.341958219573812 0.0 0.0 0.0 0 0.25 1.0969100130080565 0.0 0.0 + MP 3.3652 + + 124 + 1 1.763 46496.1 1.0 3726 4516 8235 HBL1_DMSO_200M_050219_2,8244 HBL1_DMSO_200M_050219_2,8244,MPKAGYSSI False True MPKAGYSSI 44.66523 477.242022693157 3450246.0 8235.0 nc|ENSG00000181381|Q5H9U9-2|DDX60L;;ENST00000515088.5_1_4:169391961-169393850:-|nuORF;;ENSG00000181381|ENST00000682922|DDX60L -0.2701077461242676 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8245 44.67 229.0 474270.0 25 0 47789.0 + -1 AAFGQLHKV 9 147 324.18715490113 323.17987843453 1 324.1874267458916 MULTI CID FTMS 0 0 0 8235 275622.75 1.0 0 0.0 10 ENSG00000129351|ENST00000588657|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-2|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-6|ILF3 4 W 1 -1 12.764 0.0 0.0 3.9496 0.0 0.0 119.089742791755 0.0 119.089742791755 0.0 4.839076583142994 0.0 0.0 0 0.0 0.0 0.0 0.0 W 3.9496 - 20 + 1 1.763 91119.0 1.0 3727 4516 8235 HBL1_DMSO_200M_050219_2,8245 HBL1_DMSO_200M_050219_2,8245, False False AAFGQLHKV 44.669522 324.187426745892 1392304.625 8235.0 ENSG00000129351|ENST00000588657|ILF3;;nc|ENSG00000129351|Q12906-4|ILF3;;nc|ENSG00000129351|Q12906-2|ILF3;;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;;nc|ENSG00000129351|Q12906|ILF3;;nc|ENSG00000129351|Q12906-5|ILF3;;nc|ENSG00000129351|Q12906-3|ILF3;;nc|ENSG00000129351|Q12906-6|ILF3 6.179512977600098 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8246 44.673 197.0 384860.0 25 0 46449.0 + 3876 DALAEAQRV 9 99 486.758629126077 971.502705318954 2 486.7591735720634 MULTI CID FTMS 0 0 0 8235 246928.140625 0.5959848842488168 -1 0.1067848205566406 11 Unmodified _DALAEAQRV_ ENSG00000136824|ENST00000374793|SMC2;nc|ENSG00000136824|O95347-2|SMC2 60.07390631473393 0.0260411565414776 4 {[DA]|[EG]}{I|L}AEAQRV 9 0 + 79.196 0.0 0.0 8.152 8.152 92.139 0.0 0.0 0.0 50.784634594678266 9.058867815920095 9.058867815920095 9.208187539523747 0 1.424742501084005 1.6989700043360187 0.3807196863200844 0.6861818737241735 + + {[DA]|[EG]}{I|L}AEAQRV;{[DA]|[EG]}{I|L}AEA[AG]RV;{[DA]|[EG]}{I|L}AVNDRV;{[DA]|[EG]}{I|L}V[DG]QRV;{[DA]|[EG]}{I|L}VANDRV;{[DA]|[EG]}{I|L}V[DG][AG]RV;W{I|L}VS{[QS]|[NT]}[PG]V 8.152;7.2041;6.013;5.7276;5.2089;4.7798;3.7097 +;-;-;-;-;-;- + 354 + 1 1.763 61522.0 1.0 3728 4516 8235 HBL1_DMSO_200M_050219_2,8246 HBL1_DMSO_200M_050219_2,8246,DALAEAQRV True True DALAEAQRV 44.67328 486.759173572063 2622200.5 8235.0 ENSG00000136824|ENST00000374793|SMC2;;nc|ENSG00000136824|O95347-2|SMC2 5.398130416870117 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8247 44.678 232.0 376600.0 25 0 57124.0 + 33288 SFQEVREY 8 110 529.2507235145272 1056.4868940958545 2 529.2508422732353 MULTI CID FTMS 0 0 0 8235 189731.21875 0.3508764457459648 -1 0.1067848205566406 12 Unmodified _SFQEVREY_ ENSG00000097046|ENST00000234626|CDC7 53.832793166522166 0.1212192986213991 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEVREY 8 0 + 77.172 0.0 0.0 7.3046 7.3046 86.755 0.0 0.0 0.0 23.667053245199625 6.289336803913173 6.289336803913173 6.289336803913173 0 1.1677353201839438 2.0 1.2302046884880935 0.3807196863200844 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEVREY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEV[{M(Oxidation (M))|F}T]S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]EVREY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]EV[{M(Oxidation (M))|F}T]S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[QA][YN]S{I|L};[YE]R[{M(Oxidation (M))|F}V]QDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T][{M(Oxidation (M))|F}V]QDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[{M(Oxidation (M))|F}V][WM]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K[YV][TP]DT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP][YV]S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7.3046;6.7093;6.4279;5.4773;4.0042;3.7091;3.6711;3.5171;3.4357;3.3758 +;-;-;-;-;-;-;-;-;- + 299 + 1 1.763 73374.3 1.0 3729 4516 8235 HBL1_DMSO_200M_050219_2,8247 HBL1_DMSO_200M_050219_2,8247,SFQEVREY True True SFQEVREY 44.677641 529.250842273235 8472098.0 8235.0 ENSG00000097046|ENST00000234626|CDC7 4.762123743693034 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8248 44.686 451.0 205720.0 25 0 12721.0 + 27064 PERQPASL 8 129 449.2433281607139 896.4721033882278 2 449.2428771853447 MULTI CID FTMS 0 0 0 8235 170554.6875 1.0 0 0.0 13 Unmodified _PERQPASL_ REV__ENST00000378891.9_3_1:1270760-1271384:-|nuORF 39.957323273325 0.2350051964751539 4 [EP]GAR[PS]A{I|L} 9 -1 + 51.951 0.0 0.0 5.795 5.795 84.267 0.0 0.0 0.0 32.659256134506336 9.670846891215277 9.670846891215277 9.208187539523742 0 1.3411290632962718 1.5228787452803376 0.0 0.0 [EP]GAR[PS]A{I|L};[EP]GA[VG][PS]A{I|L};[EP]QR[PS]A{I|L};[EP]Q[VG][PS]A{I|L};[EP]G[RK][DP]V;[EP]G[RK][DV]P 5.795;4.7679;4.7317;3.6985;2.1799;1.7501 -;-;-;-;-;- 117 + 1 1.763 75042.0 1.0 3730 4516 8235 HBL1_DMSO_200M_050219_2,8248 HBL1_DMSO_200M_050219_2,8248,PERQPASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8249 44.699 800.0 133460.0 25 0 7354.9 + + 29095 QENSSDFQSNIA 12 142 670.2911420472059 1338.5677311612117 2 670.2914916872978 MULTI CID FTMS 0 0 0 8235 154934.0625 0.5143949215084204 -1 0.1067848205566406 14 Unmodified _QENSFDSDRLE_ chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 36.506200033944 0.2662161991516171 4 [AG]ENSSD{M(Oxidation (M))|F}QSNA{I|L} 13 -1 + 98.56 0.0 0.0 7.3631 7.3631 85.513 0.0 0.0 0.0 4.953936931521653 6.690933939796508 4.953936931521653 4.953936931521653 0 0.4929928190999391 1.3979400086720375 3.131810887670697 2.274227503252014 [AG]ENSSD{M(Oxidation (M))|F}QSNA{I|L};[NS]QESD{M(Oxidation (M))|F}QSNA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NSSD{M(Oxidation (M))|F}QSNA{I|L};[AG]ENSSD{M(Oxidation (M))|F}QSGGA{I|L};[AG]ENSSD{M(Oxidation (M))|F}[AG]SNA{I|L};[NS]Q{I|L}CD{M(Oxidation (M))|F}QSNA{I|L};[AG]SNESD{M(Oxidation (M))|F}QSNA{I|L};[NS]{I|L}QCD{M(Oxidation (M))|F}QSNA{I|L};[NS]QESD{M(Oxidation (M))|F}QSGGA{I|L};[NS][AG]ESD{M(Oxidation (M))|F}QSNA{I|L} 7.3631;6.993;6.7129;6.6853;6.6853;6.5695;6.4385;6.3904;6.3133;6.3133 -;-;-;-;-;-;-;-;-;- 9778 1 1.763 82435.3 0.7200000286102295 3731 4516 8235 HBL1_DMSO_200M_050219_2,8249 HBL1_DMSO_200M_050219_2,8249,QENSFDSDRLE False False QENSSDFQSNIA 44.699472 670.291491687298 2184002.25 8235.0 chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;;ENSG00000169045|ENST00000393432|HNRNPH1;;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 7.317914485931396 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8250 44.709 527.0 199610.0 25 0 9679.4 + 2192 AQAPDLQRV 9 159 499.274682655908 0 499.2752868533134 PEAK CID FTMS 0 0 0 8235 153834.3125 0.4627219930507545 -9 0.745849609375 15 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 26.268140514670165 0.1442484609216422 4 AAPD{I|L} 5 4 31.682 0.0 0.0 3.1793 0.0 0.0 128.06577048584103 398.2154940240844 526.2812645099254 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 AAPD{I|L} 3.1793 - 45 + 1 1.763 81572.6 1.0 3732 4516 8235 HBL1_DMSO_200M_050219_2,8250 HBL1_DMSO_200M_050219_2,8250,AQAPDLQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8251 44.714 276.0 191500.0 25 0 9386.6 + 10031 FPNHQPRP 8 103 496.7552043928333 0 496.7602722048759 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _FPNHQPRP_ REV__ENST00000556924.5_1_14:21492198-21493426:-|nuORF 18.13498045792455 0.4501116112875982 4 YGD 3 -1 11.198 0.0 0.0 1.1294 0.0 0.0 156.0715527292229 497.28486047916255 653.3564132083854 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YGD 1.1294 - 68 + 1 1.763 42392.8 1.0 3733 4516 8235 HBL1_DMSO_200M_050219_2,8251 HBL1_DMSO_200M_050219_2,8251,FPNHQPRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8252 44.728 800.0 119790.0 25 0 7422.8 -1 CDFLMQHICGY 11 118 722.2966691445704 1442.578785355941 2 722.2985107302666 MULTI CID FTMS 0 0 0 8235 108760.4765625 0.2753240936717394 4 -0.4560737609863281 17 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))DFLMQHIC(Carbamidomethyl (C))GY_ ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4 13.042465956692816 0.7638483625850725 4 [QA]HDEAN{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}Y 12 -1 + 59.777 0.0 0.0 4.1437 4.1437 69.625 0.0 0.0 0.0 2.894680962404124 2.894680962404124 2.894680962404124 2.894680962404124 0 2.822682509756042 0.0 0.0 0.0 [QA]HDEAN{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}Y;[QA]HDEANP[HD]{M(Oxidation (M))|F}Y;[QA]HDEA[YE][NG]{M(Oxidation (M))|F}Y;[QA]HDEPNA[HD]{M(Oxidation (M))|F}Y;[QA]HDEP[KG][HD]{M(Oxidation (M))|F}Y;[QA]HDEP{[YC]|[HE]}[NG]{M(Oxidation (M))|F}Y;[QA]HDE[KG]P[HD]{M(Oxidation (M))|F}Y;[QA]HD[WQ]{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}Y;[QA]HD[WQ]P[HD]{M(Oxidation (M))|F}Y;[QA]HDEPN{M(Oxidation (M))|F}{[YC]|[HE]}GY 4.1437;3.9431;3.7649;3.7322;3.5049;3.4342;3.294;3.2531;3.1823;3.054 -;-;-;-;-;-;-;-;-;- 1342 + 1 1.763 71394.6 0.6000000238418579 3734 4516 8235 HBL1_DMSO_200M_050219_2,8252 HBL1_DMSO_200M_050219_2,8252,CDFLMQHICGY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8253 44.743 800.0 169210.0 25 0 11860.0 41451 VPLMCHLF 8 162 480.2439781549132 958.4734033766264 2 480.2450439333916 MULTI CID FTMS 0 0 0 8235 107052.5859375 0.2013451968728301 11 -1.0692024230957031 18 Unmodified _VPLMCHLF_ ENST00000303545.3_1_8:125499025-125499136:+|nuORF 24.20995872069341 0.5349487244130675 4 VPPW 4 6 50.207 0.0 0.0 5.2382 0.0 0.0 0.0 476.2136934869751 476.2136934869751 36.71237874310257 0.0 0.0 0.0 0 0.4545391030138068 2.0 0.0 0.0 VPPW 5.2382 - 513 + 1 1.763 105487.2 0.5099999904632568 3735 4516 8235 HBL1_DMSO_200M_050219_2,8253 HBL1_DMSO_200M_050219_2,8253,VPLMCHLF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8254 44.757 800.0 206580.0 25 0 22707.0 27793 PLPPPPPPP 9 141 454.7637970492512 907.5130411653024 2 454.7654601931572 MULTI CID FTMS 0 0 0 -1 0 19 Unmodified _PLPPPPPPP_ ENSG00000009694|ENST00000371130|TENM1;ENSG00000100312|ENST00000216139|ACR;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000117560|ENST00000367721|FASLG;ENSG00000124496|ENST00000695948|TRERF1;ENSG00000126460|ENST00000246794|PRRG2;ENSG00000132510|ENST00000448097|KDM6B;ENSG00000138771|ENST00000296043|SHROOM3;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000141456|ENST00000572293|PELP1;ENSG00000146083|ENST00000274811|RNF44;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000160685|ENST00000535420|ZBTB7B;ENSG00000170234|ENST00000307063|PWWP2A;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000175073|ENST00000310421|VCPIP1;ENSG00000175785|ENST00000393140|PRIMA1;ENSG00000176182|ENST00000322217|MYPOP;ENSG00000188779|ENST00000380035|SKOR1;ENSG00000204334|ENST00000697325|ERICH2;ENSG00000248905|ENST00000616417|FMN1;ENSG00000259956|ENST00000563281|RBM15B;ENST00000361272.8_2_8:17102747-17104366:-|nuORF;ENST00000379565.7_1_X:20227482-20284914:-|nuORF;ENST00000508096.1_1_10:126605730-126631034:+|nuORF;ENST00000508478.1_1_5:175957081-175957609:-|nuORF;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENST00000596700.5_1_19:50084718-50093643:+|nuORF;ENST00000597121.5_1_19:50086773-50093643:+|nuORF;nc|ENSG00000009694|Q9UKZ4-2|TENM1;nc|ENSG00000110076|P58401|NRXN2;nc|ENSG00000117560|P48023-2|FASLG;nc|ENSG00000124496|Q96PN7|TRERF1;nc|ENSG00000132510|O15054-1|KDM6B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000146083|Q7L0R7-2|RNF44;nc|ENSG00000160685|O15156-2|ZBTB7B;nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170234|Q96N64-2|PWWP2A;nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000175785|Q86XR5-2|PRIMA1;nc|ENSG00000188779|P84550-3|SKOR1;nc|ENSG00000248905|Q68DA7-5|FMN1;REV__ENSG00000048991|ENST00000683871|R3HDM1;REV__ENSG00000066855|ENST00000262146|MTFR1;REV__ENSG00000068489|ENST00000262293|PRR11;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000100592|ENST00000360909|DAAM1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000119596|ENST00000325680|YLPM1;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000125740|ENST00000353609|FOSB;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__ENSG00000132510|ENST00000448097|KDM6B;REV__ENSG00000135250|ENST00000393651|SRPK2;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138081|ENST00000403359|FBXO11;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__ENSG00000141431|ENST00000269197|ASXL3;REV__ENSG00000145414|ENST00000274054|NAF1;REV__ENSG00000146122|ENST00000274867|DAAM2;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152409|ENST00000396137|JMY;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000157827|ENST00000288670|FMNL2;REV__ENSG00000162775|ENST00000369784|RBM15;REV__ENSG00000164916|ENST00000328914|FOXK1;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000173166|ENST00000319170|RAPH1;REV__ENSG00000173917|ENST00000330070|HOXB2;REV__ENSG00000175073|ENST00000310421|VCPIP1;REV__ENSG00000176624|ENST00000406189|MEX3C;REV__ENSG00000186472|ENST00000333891|PCLO;REV__ENSG00000187017|ENST00000645284|ESPN;REV__ENSG00000187164|ENST00000355371|SHTN1;REV__ENSG00000203485|ENST00000392634|INF2;REV__ENSG00000215045|ENST00000457091|GRID2IP;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000274209|ENST00000620264|ANTXRL;REV__ENST00000324225.8_1_11:117049861-117050083:+|nuORF;REV__ENST00000358635.7_1_4:140005384-140005639:-|nuORF;REV__ENST00000368219.1_1_1:156698226-156698472:-|nuORF;REV__ENST00000379565.7_1_X:20227482-20284914:-|nuORF;REV__ENST00000424808.6_1_8:66582187-66620357:+|nuORF;REV__ENST00000471339.1_1_5:173036657-173043649:-|nuORF;REV__ENST00000519935.1_1_7:27209203-27211037:+|nuORF;REV__ENST00000587358.1_1_19:45974364-45976267:+|nuORF;REV__nc|ENSG00000048991|Q15032-2|R3HDM1;REV__nc|ENSG00000048991|Q15032-3|R3HDM1;REV__nc|ENSG00000048991|Q15032-4|R3HDM1;REV__nc|ENSG00000048991|Q15032|R3HDM1;REV__nc|ENSG00000066855|Q15390-2|MTFR1;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100592|Q9Y4D1-3|DAAM1;REV__nc|ENSG00000100592|Q9Y4D1|DAAM1;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000119596|P49750-1|YLPM1;REV__nc|ENSG00000119596|P49750-3|YLPM1;REV__nc|ENSG00000125740|P53539-10|FOSB;REV__nc|ENSG00000125740|P53539-2|FOSB;REV__nc|ENSG00000125740|P53539-3|FOSB;REV__nc|ENSG00000125740|P53539-5|FOSB;REV__nc|ENSG00000125740|P53539-8|FOSB;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1;REV__nc|ENSG00000132510|O15054-1|KDM6B;REV__nc|ENSG00000135250|P78362|SRPK2;REV__nc|ENSG00000138081|Q86XK2-4|FBXO11;REV__nc|ENSG00000138081|Q86XK2-5|FBXO11;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3;REV__nc|ENSG00000140836|Q15911-2|ZFHX3;REV__nc|ENSG00000146122|Q86T65-4|DAAM2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000157827|Q96PY5|FMNL2;REV__nc|ENSG00000162775|Q96T37-2|RBM15;REV__nc|ENSG00000162775|Q96T37-3|RBM15;REV__nc|ENSG00000162775|Q96T37-4|RBM15;REV__nc|ENSG00000170004|Q12873-3|CHD3;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__nc|ENSG00000187017|B1AK53-2|ESPN;REV__nc|ENSG00000187164|A0MZ66-2|SHTN1;REV__nc|ENSG00000187164|A0MZ66-3|SHTN1;REV__nc|ENSG00000187164|A0MZ66-4|SHTN1;REV__nc|ENSG00000187164|A0MZ66-5|SHTN1;REV__nc|ENSG00000187164|A0MZ66-6|SHTN1;REV__nc|ENSG00000187164|A0MZ66-8|SHTN1;REV__nc|ENSG00000203485|Q27J81-2|INF2;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__PCLO|p.V3720Sfs*2|1|0.13|ENSG00000186472|chr7:82916828-82916829|-/T|frameshift_variant 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPPP{[HG]|PP} 9 0 + 48.328 0.0 0.0 5.3254 5.3254 85.341 0.0 0.0 0.0 14.717262228329552 6.478174818886366 6.478174818886366 13.47295930833134 0 1.1549471895720984 1.5228787452803376 0.0 0.0 + + [{I|L}P]PPPPP{[HG]|PP};[{I|L}P][YK]PP{[HG]|PP};{[HG]|PP}P{I|L}PPP{[HG]|PP};[YK]{I|L}PPP{[HG]|PP};{[HG]|PP}{I|L}PPPP{[HG]|PP};[{I|L}P]P[YK]P{[HG]|PP};{[HG]|PP}PP{I|L}PP{[HG]|PP};[YK]P{I|L}PP{[HG]|PP};[{I|L}P]PQ{M(Oxidation (M))|F}{I|L}{[HG]|PP};[{I|L}P]PP[YK]{[HG]|PP} 5.3254;3.8408;3.7036;3.6532;3.5096;3.0128;2.9524;2.902;2.5687;2.3556 +;-;-;-;-;-;-;-;-;- + 496 1 1.763 133673.2 0.4900000095367431 3736 4516 8235 HBL1_DMSO_200M_050219_2,8254 HBL1_DMSO_200M_050219_2,8254,PLPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8256 44.762 11.0 4484000.0 25 0 533280.0 + 24992 MPPPPPQGV 9 73 460.23852327962805 918.462493626056 2 460.2390014529228 MULTI CID FTMS 0 0 0 8255 5189979.0 0.2800542908214236 59 -4.935050964355469 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 4 P[{M(Oxidation (M))|F}T]GV 5 6 23.5 0.0 0.0 2.5586 0.0 0.0 399.2101539798168 0.0 399.2101539798168 0.0 7.302046884880937 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 P[{M(Oxidation (M))|F}T]GV 2.5586 - 109 + 1 1.773 43981.4 1.0 3737 4517 8255 HBL1_DMSO_200M_050219_2,8256 HBL1_DMSO_200M_050219_2,8256,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8257 44.763 69.0 705370.0 25 0 73900.0 + 3384 AYQQRVTAL 9 81 525.2899663712622 1048.5653798093242 2 525.2908203005791 MULTI CID FTMS 0 0 0 8255 711008.5625 0.4323266784607531 2 -0.2239913940429687 2 Unmodified _AYQQRVTAL_ ENSG00000135968|ENST00000309863|GCC2;ENST00000393321.2_3_2:109102933-109106471:+|nuORF 57.72198328787511 0.0273433238377839 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQ 4 5 47.619 0.0 0.0 4.5414 0.0 0.0 0.0 555.3271578424436 555.3271578424436 12.442190502882156 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.3807196863200844 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQ 4.5414 + + 102 + 1 1.773 46474.7 1.0 3738 4517 8255 HBL1_DMSO_200M_050219_2,8257 HBL1_DMSO_200M_050219_2,8257,AYQQRVTAL True True AYQQRVTAL 44.763197 525.290820300579 25835150.0 8255.0 ENST00000393321.2_3_2:109102933-109106471:+|nuORF;;ENSG00000135968|ENST00000309863|GCC2 10.199256579081217 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8258 44.764 28.0 2461600.0 25 0 197670.0 + 12947 HAFKISKI 8 98 472.2895465415244 942.5645401498488 2 472.2899658083916 MULTI CID FTMS 0 0 0 8255 1765052.25 0.702848522907007 -1 0.1107902526855468 3 Unmodified _HAFKISKI_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4 45.69961567697781 0.159474709770503 4 [HA]{M(Oxidation (M))|F}K{I|L}SK{I|L} 8 0 + 66.609 0.0 0.0 7.0668 7.0668 93.492 0.0 0.0 0.0 16.72212741510407 48.86168767277148 16.72212741510407 21.989700043360187 0 1.579689690656103 1.3979400086720375 0.0 0.0 + + [HA]{M(Oxidation (M))|F}K{I|L}SK{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}AHSK{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HA]{I|L}SK{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[KS]AH{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}A[KS]H{I|L} 7.0668;4.7338;3.5701;2.4564;2.2696 +;-;-;-;- + 127 1 1.773 58558.8 1.0 3739 4517 8255 HBL1_DMSO_200M_050219_2,8258 HBL1_DMSO_200M_050219_2,8258,HAFKISKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8259 44.768 184.0 504610.0 25 0 50595.0 + 33984 SLIKKIKDV 9 122 348.5655144168318 1042.6747138506953 3 348.5652953982353 MULTI CID FTMS 0 0 0 8255 342709.125 0.9895835890002354 1 -0.1328506469726562 4 Unmodified _SLIKKIKDV_ ENSG00000005020|ENST00000345317|SKAP2;ENST00000468712.5_1_7:26766479-26894483:-|nuORF;ENST00000487720.1_1_7:26887667-26904048:-|nuORF;ENST00000497511.5_1_7:26786288-26904048:-|nuORF 21.59015148037692 0.2564810811560323 4 VT{I|L}KK{I|L}KDV 9 2 + 70.065 0.0 0.0 6.7197 6.7197 80.371 0.0 0.0 0.0 3.0102999566398125 5.542872095319609 3.0102999566398125 3.0102999566398125 0 0.3054621874040891 2.0 0.0 0.0 VT{I|L}KK{I|L}KDV;S{I|L}{I|L}KK{I|L}KDV;VT{I|L}KK{I|L}KVD;S{I|L}{I|L}KK{I|L}KVD 6.7197;6.431;6.1881;5.8994 -;+;-;- + 232 + 1 1.773 82258.9 1.0 3740 4517 8255 HBL1_DMSO_200M_050219_2,8259 HBL1_DMSO_200M_050219_2,8259,SLIKKIKDV False True SLIKKIKDV 44.767915 348.565295398235 3277970.125 8255.0 ENST00000487720.1_1_7:26887667-26904048:-|nuORF;;ENST00000497511.5_1_7:26786288-26904048:-|nuORF;;ENSG00000005020|ENST00000345317|SKAP2;;ENST00000468712.5_1_7:26766479-26894483:-|nuORF 4.109467109044393 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8260 44.771 140.0 482770.0 25 0 91594.0 + 15615 IQDDAVHTL 9 122 506.2598712851149 1010.5051896370298 2 506.2581664919853 MULTI CID FTMS 0 0 0 8255 342228.0 1.0 0 0.0 5 Unmodified _IQDDAVHTL_ ENSG00000115816|ENST00000234170|CEBPZ 58.6788170122104 0.0268135626297836 4 {[DA]|[EG]}DVHT{I|L}Q{I|L} 9 5 + 46.041 0.0 0.0 4.5562 4.5562 79.687 0.0 0.0 0.0 10.969100130080555 13.46787486224656 10.969100130080555 9.208187539523747 0 0.0 1.0 0.0 0.0 {[DA]|[EG]}DVHT{I|L}Q{I|L};{[DA]|[EG]}DVHT{I|L}[AG]{I|L};[HT]{I|L}PGMDQ{I|L};[{I|L}P][HT]GMDQ{I|L};{[DA]|[EG]}DVH[WR]{I|L};[Q{I|L}]QVN[C(Carbamidomethyl (C))H]{I|L};[VS][YR]MDQ{I|L};[HT]{I|L}PGMD[AG]{I|L};[HT]{I|L}PGQ[MD]{I|L};[{M(Oxidation (M))|F}V]QYT{I|L}Q{I|L} 4.5562;3.645;3.4707;2.8243;2.6554;2.6371;2.58;2.5595;2.3852;2.3804 -;-;-;-;-;-;-;-;-;- 525 1 1.773 55988.1 1.0 3741 4517 8255 HBL1_DMSO_200M_050219_2,8260 HBL1_DMSO_200M_050219_2,8260,IQDDAVHTL True True IQDDAVHTL 44.770734 506.258166491985 2347485.0 8255.0 ENSG00000115816|ENST00000234170|CEBPZ 3.57339080174764 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8261 44.775 240.0 617560.0 25 0 64644.0 -1 AYVHMVTHF 9 128 374.1794668738054 1119.5165712216162 3 374.1798583865166 MULTI CID FTMS 0 0 0 8255 215612.96875 0.2720288436055185 2 -0.2239913940429687 6 Oxidation (M) _AYVHM(Oxidation (M))VTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 11.494710602746466 0.5255349189887087 4 {M(Oxidation (M))|F} 1 -1 11.99 0.0 0.0 1.071 0.0 0.0 954.4374371657552 0.0 954.4374371657552 0.0 -7.843181179205061 -7.843181179205061 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.071 + + 170 + 1 1.773 123986.1 1.0 3742 4517 8255 HBL1_DMSO_200M_050219_2,8261 HBL1_DMSO_200M_050219_2,8261,AYVHMVTHF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8262 44.783 425.0 151090.0 25 0 6267.7 + + 32441 RFHTITTSY 9 114 563.2852493459861 1124.5559457587722 2 563.2878906130791 MULTI CID FTMS 0 0 0 8255 190177.265625 0.6302356986739587 2 -0.2239913940429687 7 Unmodified _SAEELLLTSY_ ENSG00000084733|ENST00000264710|RAB10 20.453626601364224 0.5043500229302764 4 T{I|L}TT{[{M(Oxidation (M))|F}C]|[YS]} 6 -1 30.01 0.0 0.0 2.6686 0.0 0.0 440.2290211408219 0.0 440.2290211408219 0.0 6.645293596321125 0.0 0.0 0 0.5 0.0 1.2614393726401687 0.0 T{I|L}TT{[{M(Oxidation (M))|F}C]|[YS]} 2.6686 - 252 1 1.773 53488.9 1.0 3743 4517 8255 HBL1_DMSO_200M_050219_2,8262 HBL1_DMSO_200M_050219_2,8262,SAEELLLTSY False False RFHTITTSY 44.782784 563.287890613079 3323813.25 8255.0 ENSG00000084733|ENST00000264710|RAB10 7.586103598276774 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8263 44.797 800.0 182740.0 25 0 15376.0 + -1 KYSTFLMLNA 10 148 602.3082280897272 1202.6019032462543 2 602.3093139529228 MULTI CID FTMS 0 0 0 8255 144570.28125 0.084571293419245 -3 0.287689208984375 8 Oxidation (M) _KYSTFLM(Oxidation (M))LNA_ REV__ENST00000500779.2_1_5:110848093-111005185:+|nuORF 20.41453444215458 0.5050059513928961 4 [{I|L}P]VSQSQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]} 11 -1 + 62.325 0.0 0.0 5.1825 5.1825 69.095 0.0 0.0 0.0 0.365938022764567 7.367585652254192 0.365938022764567 0.365938022764567 0 0.5 0.8860566476931632 1.9436726795685344 0.4247425010840047 [{I|L}P]VSQSQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[VP]SQ{I|L}SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[VP]{I|L}SQSQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[VP]S{I|L}QSQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[{I|L}P][NS]{I|L}SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[{I|L}P]VSQS[AG]{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[{I|L}P]VS[AG]SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[VP]S[AG]{I|L}SQ{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[VP]SQ{I|L}S[AG]{M(Oxidation (M))|F}{I|L}{[QG]|[NA]};[VP]{I|L}SQS[AG]{M(Oxidation (M))|F}{I|L}{[QG]|[NA]} 5.1825;5.1521;4.9676;4.8212;4.4549;4.4234;4.4234;4.393;4.393;4.2085 -;-;-;-;-;-;-;-;-;- 2372 1 1.773 105274.7 0.6800000071525574 3744 4517 8255 HBL1_DMSO_200M_050219_2,8263 HBL1_DMSO_200M_050219_2,8263,KYSTFLMLNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8264 44.81 800.0 172420.0 25 0 19695.0 + -1 LDQCMELFY 9 137 617.7600705180909 1233.5055881029816 2 617.7601196169853 MULTI CID FTMS 0 0 0 8255 138123.359375 1.0 0 0.0 9 Carbamidomethyl (C),Oxidation (M) _LDQC(Carbamidomethyl (C))M(Oxidation (M))ELFY_ REV__ENSG00000133477|ENST00000333407|FAM83F;REV__nc|ENSG00000133477|Q8NEG4-2|FAM83F 21.74664581756881 0.2544899275067181 4 EAQQNA{M(Oxidation (M))|F}Y 8 -1 73.608 0.0 0.0 5.9674 0.0 0.0 264.0855885236344 0.0 264.0855885236344 0.0 49.32835048914064 0.0 0.0 0 0.5 0.0 0.3494850021680094 1.274227503252014 EAQQNA{M(Oxidation (M))|F}Y 5.9674 - 2655 1 1.773 102217.6 0.6800000071525574 3745 4517 8255 HBL1_DMSO_200M_050219_2,8264 HBL1_DMSO_200M_050219_2,8264,LDQCMELFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8265 44.824 800.0 155020.0 25 0 17138.0 + 15121 INEIEREMIQ 10 130 645.8239092609051 1289.63326558861 2 646.3261596560478 MULTI CID FTMS 0 0 0 8255 134099.421875 0.45899088314304 -2 0.2175750732421875 10 Oxidation (M) _INEIEREM(Oxidation (M))IQ_ REV__ENSG00000168491|ENST00000307588|CCDC110;REV__nc|ENSG00000168491|Q8TBZ0-2|CCDC110 45.69961567697781 0.105390671673896 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}GD[HK]V[NS]Q 11 -1 + 56.242 0.0 0.0 4.361 4.361 69.162 0.0 0.0 0.0 2.0144368507241595 2.0144368507241595 2.0144368507241595 2.0144368507241595 0 0.5 0.0 0.4247425010840047 0.7742275032520141 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}GD[HK]V[NS]Q;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[HK]DG{M(Oxidation (M))|F}{I|L}Q;[TP]T{M(Oxidation (M))|F}[HK]DG{M(Oxidation (M))|F}{I|L}Q;{[CP]|[EA]}{M(Oxidation (M))|F}V[HK]DG{M(Oxidation (M))|F}{I|L}Q;{[{M(Oxidation (M))|F}C]|[YS]}PV[HK]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}EA{[TV]|[{I|L}S]}[QA]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}EA[NS][TP]G{M(Oxidation (M))|F}{I|L}Q;[TP]M{[QG]|[NA]}{I|L}[QA]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}EA[DG]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}E[RD][QA]G{M(Oxidation (M))|F}{I|L}Q 4.361;4.2048;4.1276;3.9669;3.9669;3.8877;3.8126;3.4741;3.402;3.3938 -;-;-;-;-;-;-;-;-;- 3940 + 1 1.773 96957.6 0.6600000262260437 3746 4517 8255 HBL1_DMSO_200M_050219_2,8265 HBL1_DMSO_200M_050219_2,8265,INEIEREMIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8266 44.832 418.0 422430.0 25 0 44472.0 + -1 IIMLPPRL 8 190 323.5380891928355 967.5924381787064 3 323.5378906130791 MULTI CID FTMS 0 0 0 8255 119217.8359375 1.0 0 0.0 11 Oxidation (M) _IIM(Oxidation (M))LPPRL_ REV__ENSG00000048649|ENST00000308488|RSF1;REV__ENST00000531768.1_1_11:77402049-77404650:-|nuORF;REV__nc|ENSG00000048649|Q96T23-2|RSF1;REV__nc|ENSG00000048649|Q96T23-3|RSF1 10.823927491677226 0.7510103885582552 4 {I|L}{I|L} 2 -1 20.969 0.0 0.0 2.1671 0.0 0.0 0.0 738.4015787433638 738.4015787433638 10.78803926680834 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 2.1671 + + 76 + 1 1.773 145488.3 1.0 3747 4517 8255 HBL1_DMSO_200M_050219_2,8266 HBL1_DMSO_200M_050219_2,8266,IIMLPPRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8267 44.847 800.0 77594.0 25 0 4394.9 + -1 DAVPITCMWC 10 110 606.2482928076166 0 606.2477294802666 PEAK CID FTMS 0 0 0 8255 118980.203125 1.0 0 0.0 12 Carbamidomethyl (C),Oxidation (M) _DAVPITC(Carbamidomethyl (C))M(Oxidation (M))WC_ REV__ENST00000361875.7_1_3:150180166-150180214:+|nuORF 10.073929032068715 0.3742530088597855 4 E 1 -1 14.292 0.0 0.0 1.1807 0.0 0.0 285.13071837058675 793.2868878100626 1078.4176061806493 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.0 E 1.1807 - 18 + 1 1.773 52701.5 0.6299999952316284 3748 4517 8255 HBL1_DMSO_200M_050219_2,8267 HBL1_DMSO_200M_050219_2,8267,DAVPITCMWC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8268 44.861 800.0 173980.0 25 0 15842.0 -1 LNEMERTQAQL 11 120 674.8274393906415 1347.640325848083 2 674.8284789919853 MULTI CID FTMS 0 0 0 8255 104798.4296875 0.3575006380228349 -2 0.2175750732421875 13 Oxidation (M) _LNEM(Oxidation (M))ERTQAQL_ ENSG00000105122|ENST00000343625|RASAL3;ENST00000602101.6_1_19:15562608-15563116:-|nuORF;ENST00000609274.5_2_19:15562608-15562761:-|nuORF 71.70789743142352 0.0274550572689813 4 {I|L}NEEQRAT{M(Oxidation (M))|F}{I|L}Q 11 -1 + 119.04 0.0 0.0 8.8335 8.8335 92.086 0.0 0.0 0.0 25.52819811906477 16.11819828617118 16.11819828617118 9.128498242810991 0 2.917735320183944 1.0457574905606752 0.9392404878284264 1.7346368802282015 {I|L}NEEQRAT{M(Oxidation (M))|F}{I|L}Q;{I|L}NEEQ[VG]AT{M(Oxidation (M))|F}{I|L}Q;{I|L}NEE[AG]RAT{M(Oxidation (M))|F}{I|L}Q;{I|L}GGEEQRAT{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}E{[MG]|[TS]}[QP]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}EE[DG]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}E[WD]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}EE[DG]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}E[WD]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;[AG]VE{[MG]|[TS]}[QP]DG{M(Oxidation (M))|F}{I|L}Q 8.8335;8.1562;8.1562;7.3802;6.4557;5.9371;5.8733;5.4465;5.3854;5.3694 -;-;-;-;-;-;-;-;-;- 5674 + 1 1.773 106533.2 0.5899999737739563 3749 4517 8255 HBL1_DMSO_200M_050219_2,8268 HBL1_DMSO_200M_050219_2,8268,LNEMERTQAQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8269 44.875 800.0 140850.0 25 0 5092.1 + 33985 SLIKKIKDV 9 155 522.3439607858401 1042.67336863848 2 522.3448974490166 MULTI CID FTMS 0 0 0 8255 105133.3828125 1.0 0 0.0 14 Unmodified _SLIKKIKDV_ ENSG00000005020|ENST00000345317|SKAP2;ENST00000468712.5_1_7:26766479-26894483:-|nuORF;ENST00000487720.1_1_7:26887667-26904048:-|nuORF;ENST00000497511.5_1_7:26786288-26904048:-|nuORF 24.881564428377168 0.2146028316269493 4 VT{I|L}K[K{I|L}]KDV 9 2 + 46.614 0.0 0.0 4.4706 4.4706 68.713 0.0 0.0 0.0 31.279601748529885 2.1450969996157454 2.1450969996157454 1.6662949513872007 0 1.2614393726401687 1.5228787452803376 0.0 0.0 VT{I|L}K[K{I|L}]KDV;S{I|L}{I|L}K[K{I|L}]KDV;VT{I|L}K[K{I|L}][QT]{I|L};S{I|L}{I|L}K[K{I|L}][QT]{I|L};VT{I|L}K[K{I|L}]AAS{I|L};VT{I|L}K[K{I|L}]AATV;S{I|L}{I|L}K[K{I|L}]AAS{I|L};S{I|L}{I|L}K[K{I|L}]AATV;VT{I|L}K[K{I|L}][{I|L}A]{[SA]|[TG]};S{I|L}{I|L}K[K{I|L}][{I|L}A]{[SA]|[TG]} 4.4706;4.3108;3.4583;3.2985;2.9348;2.8241;2.775;2.6643;2.5121;2.3523 -;+;-;-;-;-;-;-;-;- + 206 + 1 1.773 90714.0 0.6000000238418579 3750 4517 8255 HBL1_DMSO_200M_050219_2,8269 HBL1_DMSO_200M_050219_2,8269,SLIKKIKDV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8270 44.89 800.0 64368.0 25 0 8933.8 + 45731 GYYNQSEAGSHTL 13 86 714.3057810910879 1426.5970092489756 2 714.3073608279228 MULTI CID FTMS 0 0 0 8255 102612.890625 1.0 0 0.0 15 Unmodified _YYGDYYQRHY_ ENSG00000234745|ENST00000412585|HLA-B;ENSG00000204592|ENST00000376630|HLA-E;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;ENST00000474381.1_1_6:31323854-31324663:-|nuORF 13.90604991867851 0.6142120002215601 4 [YG]YDQSEAGS 10 8 114.8 0.0 0.0 8.0471 0.0 0.0 0.0 366.1794222467407 366.1794222467407 89.21659067315574 0.0 0.0 0.0 0 1.4049471895720984 2.0 2.610924374808178 0.5 [YG]YDQSEAGS 8.0471 - 709 + 1 1.773 43852.0 0.5699999928474426 3751 4517 8255 HBL1_DMSO_200M_050219_2,8270 HBL1_DMSO_200M_050219_2,8270,YYGDYYQRHY False False GYYNQSEAGSHTL 44.889704 714.307360827923 0.0 8255.0 ENSG00000234745|ENST00000412585|HLA-B;;ENSG00000204592|ENST00000376630|HLA-E;;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;;ENST00000474381.1_1_6:31323854-31324663:-|nuORF 6.664787133534749 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8272 44.895 76.0 587200.0 25 0 35881.0 + 4141 DAPHPLSKI 9 83 489.2738003626761 976.5330477921524 2 489.2744628787041 MULTI CID FTMS 0 0 0 8271 264826.34375 0.1482658802582385 2 -0.212432861328125 1 Unmodified _DAPHPLSKI_ ENSG00000180304|ENST00000326005|OAZ2;ENST00000560837.5_1_15:64982571-64983740:-|nuORF 21.53697664764585 0.2571576504437394 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]{[VA]|[{I|L}G]}W{I|L} 8 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]{[VA]|[{I|L}G]}W + + 12.474 0.48796 0.057716 1.2774 1.2774 44.283 0.0 0.0 0.0 0.0 -15.713337517843655 -15.713337517843655 0.0 0 0.0 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]{[VA]|[{I|L}G]}W{I|L} 1.2774 - 47 + 1 1.78 41407.3 1.0 3752 4518 8271 HBL1_DMSO_200M_050219_2,8272 HBL1_DMSO_200M_050219_2,8272,DAPHPLSKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8273 44.897 73.0 553110.0 25 0 59974.0 + + -1 FYQGHVEGY 9 74 549.7459425205411 1097.477332107882 2 550.2471801638603 MULTI CID FTMS 0 0 0 8271 649918.0 0.6422922249857999 1 -0.0911407470703125 2 Oxidation (M) _GEERM(Oxidation (M))GLYQ_ ENST00000559180.1_1_10:135086915-135090354:-|nuORF;nc|ENSG00000151651|P78325-3|ADAM8;ENST00000537099.5_1_10:135085588-135089062:-|nuORF;ENSG00000151651|ENST00000445355|ADAM8 24.020572477871973 0.2255576514309169 4 {[DA]|[EG]}[HV]Q[HT]YQ 9 -1 + 37.654 0.0 0.0 3.431 3.431 68.93 0.0 0.0 0.0 9.03089986991944 9.208187539523756 9.03089986991944 3.4948500216800937 0 0.0 1.3979400086720375 0.3807196863200844 0.8494850021680094 {[DA]|[EG]}[HV]Q[HT]YQ;{[DA]|[EG]}[HV][HT]QYQ;{[DA]|[EG]}[HV]QY[HT]Q;{[HG]|PP}VEQ[HT]YQ;{[HG]|PP}VE[HT]QYQ;{[HG]|PP}VEQY[HT]Q;{[HG]|PP}Q{NN|[MP]|[D{I|L}]|[EV]}[HT]YQ;{[HG]|PP}V[Y{M(Oxidation (M))|F}]GQYQ;{[HG]|PP}Q[NP]A[PS]YQ;{[HG]|PP}Q{NN|[MP]|[D{I|L}]|[EV]}Y[HT]Q 3.431;3.1125;2.9911;2.6081;2.2897;2.1682;2.0694;1.9427;1.7975;1.6295 -;-;-;-;-;-;-;-;-;- 191 1 1.78 35257.5 1.0 3753 4518 8271 HBL1_DMSO_200M_050219_2,8273 HBL1_DMSO_200M_050219_2,8273,GEERMGLYQ False False FYQGHVEGY 44.896937 550.24718016386 8110260.0 8271.0 ENST00000559180.1_1_10:135086915-135090354:-|nuORF;;nc|ENSG00000151651|P78325-3|ADAM8;;ENST00000537099.5_1_10:135085588-135089062:-|nuORF;;ENSG00000151651|ENST00000445355|ADAM8 6.857149442036946 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8274 44.898 25.0 1704000.0 25 0 180840.0 + 16457 KAINQGGLTSV 11 80 544.3086822638671 1086.6028115945342 2 544.3091308474541 MULTI CID FTMS 0 0 0 8271 2409596.0 0.9163583896693502 -1 0.1328506469726562 3 Unmodified _KAINQGGLTSV_ ENSG00000100902|ENST00000261479|PSMA6;ENST00000554843.5_1_14:35761682-35780127:+|nuORF;ENST00000556167.1_1_14:35761682-35777333:+|nuORF;nc|ENSG00000100902|P60900-2|PSMA6 79.59630418116434 0.0079568537026334 4 {[MG]|[TS]}[RP]{I|L}GG{I|L}TSV 11 5 + 61.943 0.0 0.0 5.7006 5.7006 80.771 0.0 0.0 0.0 6.064921830680703 10.550088832413527 6.064921830680703 6.064921830680703 0 1.5924778212679485 0.0 0.7302046884880937 0.8494850021680094 {[MG]|[TS]}[RP]{I|L}GG{I|L}TSV;{[QN]|[E{I|L}]|[KN]}[KA]{I|L}GG{I|L}TSV;{[MG]|[TS]}[RP]{I|L}N{I|L}TSV;{[QN]|[E{I|L}]|[KN]}[KA]{I|L}N{I|L}TSV;[VS][WP][KA]{I|L}TSV;{[QN]|[E{I|L}]|[KN]}N{I|L}[KA]{I|L}TSV;{[QN]|[E{I|L}]|[KN]}NRR{I|L}TSV;[VS][WP]RRTSV;[VS][WP]{I|L}[KA]TSV;{[QN]|[E{I|L}]|[KN]}GG{I|L}[KA]{I|L}TSV 5.7006;5.1424;5.0954;4.5373;3.9372;3.7073;3.5452;3.0144;2.9723;2.8639 -;-;-;-;-;-;-;-;-;- 335 1 1.78 38542.5 1.0 3754 4518 8271 HBL1_DMSO_200M_050219_2,8274 HBL1_DMSO_200M_050219_2,8274,KAINQGGLTSV True True KAINQGGLTSV 44.898116 544.309130847454 41513192.0 8271.0 ENST00000554843.5_1_14:35761682-35780127:+|nuORF;;ENST00000556167.1_1_14:35761682-35777333:+|nuORF;;ENSG00000100902|ENST00000261479|PSMA6;;nc|ENSG00000100902|P60900-2|PSMA6;;chr14:35294529-35307994|40|30.73|0.0|21.55|+|2|TE_info:MIR,MIR_dup134546,MIR,SINE,donor,+,35294443,35294529|None,PSMA6|2;;chr14:35292877-35307994|18|30.89|0.0|21.56|+|2|None,PSMA6|1 6.444746494293213 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8275 44.899 30.0 1681200.0 25 0 194290.0 + 31573 RQPDSGISSI 10 71 530.2748439334505 1058.5351349337009 2 530.2753173708916 MULTI CID FTMS 0 0 0 8271 1603588.5 0.6588050588999199 -1 0.1328506469726562 4 Unmodified _RQPDSGISSI_ ENSG00000163902|ENST00000296255|RPN1 49.52724829834842 0.0829255630816734 4 {[TV]|[{I|L}S]}[YG]YG{I|L}SS{I|L} 10 5 + 77.128 0.0 0.0 7.2863 7.2863 91.974 0.0 0.0 0.0 10.981362441963327 52.71775040875461 10.981362441963327 11.631928475523525 0 1.3494850021680094 1.3010299956639813 1.1237125054200234 0.0 {[TV]|[{I|L}S]}[YG]YG{I|L}SS{I|L};[AG]R[DP]SG{I|L}SS{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[DP]SG{I|L}SS{I|L};{[TV]|[{I|L}S]}S{[QN]|[E{I|L}]|[KN]}[HS]SS{I|L};{[CA]|SS}{I|L}{[QN]|[E{I|L}]|[KN]}[HS]SS{I|L};[AG][WP][QT]{I|L}SS{I|L};[AG][TP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{I|L}SS{I|L};{[WT]|[RM]}{[QN]|[E{I|L}]|[KN]}[HS]SS{I|L};[AG][WP][WR]SS{I|L};{[CA]|SS}{I|L}{[QN]|[E{I|L}]|[KN]}[VP]DS{I|L} 7.2863;6.1874;6.0825;5.5618;4.687;4.648;4.4708;4.2844;4.0309;4.0013 -;-;+;-;-;-;-;-;-;- + 345 1 1.78 44405.3 1.0 3755 4518 8271 HBL1_DMSO_200M_050219_2,8275 HBL1_DMSO_200M_050219_2,8275,RQPDSGISSI True True RQPDSGISSI 44.899294 530.275317370892 64196880.0 8271.0 ENSG00000163902|ENST00000296255|RPN1 7.830772082010905 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8276 44.902 124.0 605670.0 25 0 109770.0 42152 VSALKGLPG 9 85 421.2602850785381 840.5060172238763 2 421.2604858279228 MULTI CID FTMS 0 0 0 8271 490932.3125 0.3666192771432985 -2 0.2436408996582031 5 Unmodified _VSALKGLPG_ ENST00000369827.7_1_1:110217734-110217830:+|nuORF 25.399314129420983 0.2080152500878129 4 [VS]VGPV 6 5 46.688 0.0 0.0 5.5547 0.0 0.0 0.0 299.17256202770744 299.17256202770744 11.281446971601312 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 [VS]VGPV 5.5547 - 287 + 1 1.78 65313.2 1.0 3756 4518 8271 HBL1_DMSO_200M_050219_2,8276 HBL1_DMSO_200M_050219_2,8276,VSALKGLPG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8277 44.903 70.0 664400.0 25 0 41025.0 + 29807 QQHPAFSGV 9 93 485.73983136133 969.46510978946 2 485.7409850955009 MULTI CID FTMS 0 0 0 8271 485006.5625 0.9800336629430731 -1 0.1328506469726562 6 Unmodified _QQHPAFSGV_ ENSG00000165271|ENST00000297990|NOL6;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6 23.1484247019978 0.2366544122328345 4 [SG][KC][VP]HSGV 10 6 [SG][KC][VP]H + + 21.427 -5.0101 -0.70731 2.2102 2.2102 44.753 0.0 0.0 0.0 0.0 5.907431454711933 0.0 0.0 0 0.0 0.0 0.0 0.0 [SG][KC][VP]HSGV 2.2102 - 185 + 1 1.78 42017.6 1.0 3757 4518 8271 HBL1_DMSO_200M_050219_2,8277 HBL1_DMSO_200M_050219_2,8277,QQHPAFSGV False True QQHPAFSGV 44.903498 485.740985095501 4699712.0 8271.0 ENSG00000165271|ENST00000297990|NOL6;;nc|ENSG00000165271|Q9H6R4-2|NOL6;;nc|ENSG00000165271|Q9H6R4-4|NOL6 7.448289235432942 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8278 44.906 119.0 971680.0 25 0 170450.0 + -1 VAMGRVVKV 9 108 320.20717090309995 319.1998944365 1 320.2077209353447 MULTI CID FTMS 0 0 0 8271 323895.3125 1.0 0 0.0 7 ENSG00000148843|ENST00000369797|PDCD11 4 {I|L} 1 -1 16.99 0.0 0.0 5.3226 0.0 0.0 188.1049827927484 0.0 188.1049827927484 0.0 5.880456295278407 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 5.3226 - 30 + 1 1.78 96660.4 1.0 3758 4518 8271 HBL1_DMSO_200M_050219_2,8278 HBL1_DMSO_200M_050219_2,8278, False False VAMGRVVKV 44.905954 320.207720935345 1016087.125 8271.0 ENSG00000148843|ENST00000369797|PDCD11 0.007718672355016 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8279 44.908 107.0 424380.0 25 0 23390.0 + -1 SAVCHSYSV 9 106 505.22408645478106 1008.433619976362 2 505.2242919802666 MULTI CID FTMS 0 0 0 8271 297349.71875 0.9629469694547006 1 -0.0911407470703125 8 Carbamidomethyl (C) _SAVC(Carbamidomethyl (C))HSYSV_ REV__ENST00000494399.5_1_1:45478943-45479284:+|nuORF 11.640296217721598 0.521594087909532 4 {[DA]|[EG]}A[KP]T 6 -1 29.666 0.0 0.0 2.9418 0.0 0.0 0.0 422.1138317285684 422.1138317285684 12.01530176554556 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[DA]|[EG]}A[KP]T 2.9418 - 221 1 1.78 39598.7 1.0 3759 4518 8271 HBL1_DMSO_200M_050219_2,8279 HBL1_DMSO_200M_050219_2,8279,SAVCHSYSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8280 44.914 315.0 325350.0 25 0 42547.0 10369 FSNHTGYAHW 10 103 610.264962759992 1218.515372586784 2 610.2664672732353 MULTI CID FTMS 0 0 0 8271 178941.375 0.069189953266014 -3 0.3504257202148437 9 Unmodified _FSNHTGYAHW_ ENSG00000160209|ENST00000291565|PDXK;nc|ENSG00000160209|O00764-2|PDXK 14.838274106304384 0.5985701837916485 4 {[QG]|[NA]}YPY 5 8 45.942 0.0 0.0 3.7703 0.0 0.0 0.0 607.2323129323366 607.2323129323366 27.118033645342194 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 {[QG]|[NA]}YPY 3.7703 - 98 + 1 1.78 78269.0 1.0 3760 4518 8271 HBL1_DMSO_200M_050219_2,8280 HBL1_DMSO_200M_050219_2,8280,FSNHTGYAHW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8281 44.918 222.0 267620.0 25 0 36381.0 -1 CKTCSACRV 9 100 514.2297651050259 0 514.2300903201103 PEAK CID FTMS 0 0 0 8271 168839.328125 0.21395185161308 3 -0.2987937927246094 10 Carbamidomethyl (C) _CKTC(Carbamidomethyl (C))SACRV_ ENSG00000156650|ENST00000287239|KAT6B;nc|ENSG00000156650|Q8WYB5-2|KAT6B;nc|ENSG00000156650|Q8WYB5-3|KAT6B 11.640296217721598 0.2934555500198502 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.68096 0.0 0.0 694.2963973372629 182.0574740045532 876.353871341816 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.68096 - 20 + 1 1.78 50946.3 1.0 3761 4518 8271 HBL1_DMSO_200M_050219_2,8281 HBL1_DMSO_200M_050219_2,8281,CKTCSACRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8282 44.924 346.0 382710.0 25 0 65187.0 + 35675 SVDSHFQEV 9 145 524.2400057541652 1046.4654585751302 2 524.2402831912041 MULTI CID FTMS 0 0 0 8271 168478.109375 0.0748388132864371 -3 0.3504257202148437 11 Unmodified _SVDSHFQEV_ ENSG00000114026|ENST00000344629|OGG1;ENST00000432857.2_1_3:9792686-9793638:+|nuORF;nc|ENSG00000114026|O15527-2|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-8|OGG1 60.07390631473393 0.0260411565414776 4 D{M(Oxidation (M))|F}QWEV 6 5 51.307 0.0 0.0 4.9029 0.0 0.0 224.0909596173844 0.0 224.0909596173844 0.0 22.978844195129284 0.0 0.0 0 0.6643943297944485 0.0 0.7742275032520141 0.0 D{M(Oxidation (M))|F}QWEV 4.9029 - 3728 1 1.78 105962.3 1.0 3762 4518 8271 HBL1_DMSO_200M_050219_2,8282 HBL1_DMSO_200M_050219_2,8282,SVDSHFQEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8283 44.938 800.0 335630.0 25 0 56567.0 + 19225 LEGVTVYSYLY 11 121 653.8345719498211 1305.654590966442 2 653.8349487185478 MULTI CID FTMS 0 0 0 8271 159807.09375 0.2713168970780718 -3 0.3504257202148437 12 Unmodified _LEGVTVYSYLY_ REV__ENSG00000139514|ENST00000380752|SLC7A1;REV__ENSG00000165349|ENST00000374299|SLC7A3 13.042465956692816 0.7638483625850725 4 [VP]TSPV 6 -1 31.278 0.0 0.0 2.3956 0.0 0.0 0.0 722.3090613106282 722.3090613106282 13.971203775967634 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.9674165578762486 0.0 [VP]TSPV 2.3956 - 736 1 1.78 197206.1 0.699999988079071 3763 4518 8271 HBL1_DMSO_200M_050219_2,8283 HBL1_DMSO_200M_050219_2,8283,LEGVTVYSYLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8284 44.952 800.0 218290.0 25 0 19633.0 + 29775 QPYLSSREV 9 147 539.7793114442129 1077.5440699552255 2 539.7787353396416 MULTI CID FTMS 0 0 0 8271 155148.703125 0.6766109694943998 -2 0.2436408996582031 13 Unmodified _QPYLSSREV_ nc|ENSG00000258289|Q8WUH1-1|CHURC1 34.93206674587334 0.1032771302489716 4 PQY{I|L}S[RD]TV 9 4 + 59.97 0.0 0.0 5.5655 5.5655 75.307 0.0 0.0 0.0 8.997519816658368 8.997519816658368 8.997519816658368 2.869704042775041 0 1.031234684152075 0.0 1.048455006504028 0.0 PQY{I|L}S[RD]TV;PQY{I|L}SS{[RE]|[WV]}V;[Y{I|L}]{[NV]|[RG]}S{I|L}{[CA]|SS}PV;P[AG]Y{I|L}S[RD]TV;PQY{I|L}V[EC]KV;P[AG]Y{I|L}SS{[RE]|[WV]}V;[Y{I|L}][NS]V{I|L}{[CA]|SS}PV;PQY{I|L}S[RD]S{I|L};PQY{I|L}S[Q{I|L}]MV;[Y{I|L}]{[NV]|[RG]}S[WP]TV 5.5655;5.2992;4.7305;4.7109;4.4713;4.4446;4.4262;4.4218;4.3989;4.3302 -;-;-;-;-;-;-;-;-;- 1459 + 1 1.78 138018.8 0.7099999785423279 3764 4518 8271 HBL1_DMSO_200M_050219_2,8284 HBL1_DMSO_200M_050219_2,8284,QPYLSSREV True True QPYLSSREV 44.952116 539.778735339642 2179947.25 8271.0 nc|ENSG00000258289|Q8WUH1-1|CHURC1 4.27811614672343 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 8285 44.961 494.0 451790.0 25 0 39307.0 + -1 AGGECWPLCGL 11 147 407.1789569803616 1218.5150415412847 3 407.1794006228447 MULTI CID FTMS 0 0 0 8271 134826.875 0.0609640643711881 -3 0.3504257202148437 14 2 Carbamidomethyl (C) _AGGEC(Carbamidomethyl (C))WPLC(Carbamidomethyl (C))GL_ REV__ENST00000225777.7_1_17:76168333-76168627:+|nuORF 9.764250979337303 0.8290795630453686 4 {[QG]|[NA]}YPY{I|L} 6 -1 48.945 0.0 0.0 4.0168 0.0 0.0 0.0 494.1489657037719 494.1489657037719 37.3514532483668 0.0 0.0 0.0 0 0.6549471895720984 1.6989700043360187 0.0 0.0 {[QG]|[NA]}YPY{I|L} 4.0168 - 275 + 1 1.78 177595.7 1.0 3765 4518 8271 HBL1_DMSO_200M_050219_2,8285 HBL1_DMSO_200M_050219_2,8285,AGGECWPLCGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8286 44.975 800.0 91626.0 25 0 23751.0 -1 0 33 1158.4616707401642 3472.3631828206926 3 1158.798632800579 MULTI CID FTMS 0 0 0 8271 128979.4609375 0.9348108512855752 -1 0.1328506469726562 15 4 AP{[ET]|[MV]}N 5 -1 6.5546 0.0 0.0 0.18876 0.0 0.0 2313.861670224793 643.2650850885374 2957.1267553133307 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 AP{[ET]|[MV]}N 0.18876 - 20 + 1 1.78 66068.0 0.4300000071525574 3766 4518 8271 HBL1_DMSO_200M_050219_2,8286 HBL1_DMSO_200M_050219_2,8286, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8287 44.981 251.0 264060.0 25 0 26886.0 + 36114 SVSGSLGANL 10 104 452.7391506165949 903.4637482999898 2 452.7401916384697 MULTI CID FTMS 0 0 0 8271 133447.1875 1.0 0 0.0 16 Unmodified _SVSGSLGANL_ ENSG00000188897|ENST00000696174|unknown 14.838274106304384 0.5985701837916485 4 {NN|[MP]|[D{I|L}]|[EV]}Q 3 9 17.566 0.0 0.0 1.9442 0.0 0.0 0.0 544.2714624936023 544.2714624936023 4.070677831939317 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}Q 1.9442 - 126 1 1.78 59252.5 1.0 3767 4518 8271 HBL1_DMSO_200M_050219_2,8287 HBL1_DMSO_200M_050219_2,8287,SVSGSLGANL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8289 44.986 5.6 12512000.0 25 0 1606700.0 + 12945 HAFKISKI 8 86 315.1956329921905 942.5650695767716 3 315.1957580447197 MULTI CID FTMS 0 0 0 8288 9093532.0 0.7363131935831707 1 -0.1212921142578125 1 Unmodified _HAFKISKI_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4 54.773552608820026 0.1167943196628344 4 [HA]{M(Oxidation (M))|F}K{I|L}SK{I|L} 8 0 + 52.374 0.0 0.0 5.5565 5.5565 88.51 0.0 0.0 0.0 16.05786899542536 23.95750937337162 16.05786899542536 33.979400086720375 0 1.4291746928241125 1.5228787452803376 0.0 0.0 + + [HA]{M(Oxidation (M))|F}K{I|L}SK{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HA]{I|L}SK{I|L} 5.5565;1.9515 +;- + 80 1 1.789 60102.7 1.0 3768 4519 8288 HBL1_DMSO_200M_050219_2,8289 HBL1_DMSO_200M_050219_2,8289,HAFKISKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8290 44.987 27.0 1785000.0 25 0 498130.0 + 39134 TYIDKSTQL 9 68 534.7818510744078 1067.5491492156154 2 534.7825195193291 MULTI CID FTMS 0 0 0 8288 1691429.25 0.6176819069877846 1 -0.1212921142578125 2 Unmodified _TYIDKSTQL_ ENSG00000119965|ENST00000481909|C10orf88 41.8396318013385 0.0653578398400075 4 [YT]{I|L}D 4 5 47.435 0.0 0.0 4.4434 0.0 0.0 0.0 572.3045137994749 572.3045137994749 14.17171735129724 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + [YT]{I|L}D 4.4434 + + 154 + 1 1.789 44329.2 1.0 3769 4519 8288 HBL1_DMSO_200M_050219_2,8290 HBL1_DMSO_200M_050219_2,8290,TYIDKSTQL True True TYIDKSTQL 44.986712 534.782519519329 42739344.0 8288.0 ENSG00000119965|ENST00000481909|C10orf88 5.191743850708008 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8291 44.988 34.0 1700000.0 25 0 234720.0 + 3998 DALRPSVV 8 85 428.7475938389115 855.480634744623 2 428.7480041384697 MULTI CID FTMS 0 0 0 8288 1226336.125 0.3536593384417718 -2 0.2239913940429687 3 Unmodified _DALRPSVV_ ENSG00000089154|ENST00000300648|GCN1 39.94969957227396 0.2351327405675156 4 {[DA]|[EG]}{I|L}R[PS]VV 8 0 + 47.386 0.0 0.0 5.5391 5.5391 88.269 0.0 0.0 0.0 3.730815340281453 3.730815340281453 3.730815340281453 30.752574989159942 0 1.7786596949921218 1.5228787452803376 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}R[PS]VV;{[SA]|[TG]}[RV][EP]VV;{[SA]|[TG]}[RV]V[EP]V;{[SA]|[TG]}[RV]VV[EP] 5.5391;1.9444;1.4479;0.95136 +;-;-;- + 154 1 1.789 50500.4 1.0 3770 4519 8288 HBL1_DMSO_200M_050219_2,8291 HBL1_DMSO_200M_050219_2,8291,DALRPSVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8292 44.99 102.0 423010.0 25 0 50230.0 8635 EVEEDEYKAFY 11 69 711.3065774151316 1420.5986018970632 2 711.3082153201103 MULTI CID FTMS 0 0 0 8288 516050.5625 0.0201614588066351 5 -0.4741706848144531 4 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 4 ANQQA[HD]{M(Oxidation (M))|F}Y 9 9 55.679 0.0 0.0 3.9194 0.0 0.0 328.13915492707434 0.0 328.13915492707434 0.0 44.63615337528019 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 ANQQA[HD]{M(Oxidation (M))|F}Y 3.9194 - 547 + 1 1.789 36969.3 1.0 3771 4519 8288 HBL1_DMSO_200M_050219_2,8292 HBL1_DMSO_200M_050219_2,8292,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8293 44.992 83.0 936480.0 25 0 111940.0 + + -1 VYMNRVKEI 9 103 384.546727965605 1150.6183544970152 3 384.5462829470634 MULTI CID FTMS 0 0 0 8288 499194.8125 0.3405929701992553 -1 0.0911407470703125 5 Oxidation (M) _IVVLTM(Oxidation (M))CILM_ ENST00000455013.2_1_10:81784495-81784867:-|nuORF;ENSG00000197223|ENST00000410067|C1D 22.65808497894818 0.4596126414678359 4 VY{I|L}{M(Oxidation (M))|F}M 5 -1 51.23 0.0 0.0 4.4524 0.0 0.0 0.0 494.2858980768188 494.2858980768188 35.29041203075199 0.0 0.0 0.0 0 0.2302046884880938 1.6989700043360187 0.0 0.0 VY{I|L}{M(Oxidation (M))|F}M 4.4524 - 242 + 1 1.789 72105.0 1.0 3772 4519 8288 HBL1_DMSO_200M_050219_2,8293 HBL1_DMSO_200M_050219_2,8293,IVVLTMCILM False False VYMNRVKEI 44.991939 384.546282947063 14515150.0 8288.0 ENST00000455013.2_1_10:81784495-81784867:-|nuORF;;ENSG00000197223|ENST00000410067|C1D 5.043447176615397 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8294 44.995 173.0 371040.0 25 0 28361.0 + 18536 KYTEGVQSL 9 95 512.7685444857267 1023.5225360382534 2 512.7692748904228 MULTI CID FTMS 0 0 0 8288 333888.15625 0.2828506548089388 -2 0.2239913940429687 6 Unmodified _KYTEGVQSL_ ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16552211-16552709:-|nuORF 72.96794272382148 0.0199516581995792 4 {[TV]|[{I|L}S]}{[SA]|[TG]}YGVQ{[TV]|[{I|L}S]} 10 4 + 53.623 0.0 0.0 5.2391 5.2391 70.46 0.0 0.0 0.0 2.04119982655925 3.826637040881593 2.04119982655925 0.8802080986366292 0 0.7302046884880938 1.3979400086720375 1.4436726795685342 0.0 {[TV]|[{I|L}S]}{[SA]|[TG]}YGVQ{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}EG[YK]Q{[TV]|[{I|L}S]};[YK]TEGVQ{[TV]|[{I|L}S]};{[HG]|PP}PTEGVQ{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{[SA]|[TG]}YGV[AG]{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}EG[YK][AG]{[TV]|[{I|L}S]};[YK]TEGV[AG]{[TV]|[{I|L}S]};{[HG]|PP}PTEGV[AG]{[TV]|[{I|L}S]};{[DA]|[EG]}T[YK]VQ{[TV]|[{I|L}S]};{[DA]|[EG]}TV[YK]Q{[TV]|[{I|L}S]} 5.2391;5.1531;5.0396;4.558;4.3437;4.2534;4.14;3.6627;3.5517;3.2696 -;-;+;-;-;-;-;-;-;- + 997 1 1.789 54907.3 1.0 3773 4519 8288 HBL1_DMSO_200M_050219_2,8294 HBL1_DMSO_200M_050219_2,8294,KYTEGVQSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8295 44.999 210.0 328720.0 25 0 26371.0 + 2193 AQAPDLQRV 9 109 499.274682655908 0 499.2748290896416 PEAK CID FTMS 0 0 0 8288 253499.34375 0.7625068794522569 -6 0.5400505065917969 7 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 16.149105407346934 0.2417352846137613 4 APM 3 7 24.182 0.0 0.0 2.4267 0.0 0.0 199.0942181373113 495.29364954166255 694.3878676789739 0.0 0.0 0.0 0.0 0 1.0994850021680094 0.0 0.0 0.0 APM 2.4267 - 23 + 1 1.789 58500.6 1.0 3774 4519 8288 HBL1_DMSO_200M_050219_2,8295 HBL1_DMSO_200M_050219_2,8295,AQAPDLQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8296 45.006 366.0 218820.0 25 0 22371.0 + + 15842 RYQEKISAL 9 114 554.3115661879483 1106.6085794426965 2 554.3126098513603 MULTI CID FTMS 0 0 0 8288 223771.8125 0.4534109037858969 2 -0.2076530456542968 8 Oxidation (M) _ISLIM(Oxidation (M))MLSAL_ ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1 58.6788170122104 0.0400518768368984 4 [YR]QEK{I|L}SA{I|L} 9 -1 + 63.3 0.0 0.0 5.7202 5.7202 84.541 0.0 0.0 0.0 5.253312076568903 51.8799046511066 5.253312076568903 9.208187539523747 0 1.1989700043360187 0.0 1.174742501084005 0.0 [YR]QEK{I|L}SA{I|L};[YR][AG]EK{I|L}SA{I|L};[YR]QEKS{I|L}A{I|L};[YR]QG{[TV]|[{I|L}S]}{I|L}SA{I|L};[YR]AADK{I|L}SA{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[W{M(Oxidation (M))|F}]K{I|L}SA{I|L};[YR][AG]EKS{I|L}A{I|L};[YR]QEKSA{I|L}{I|L};[YR][AG]G{[TV]|[{I|L}S]}{I|L}SA{I|L};[YR]QG{[TV]|[{I|L}S]}S{I|L}A{I|L} 5.7202;4.8881;4.5445;4.3964;4.219;4.1387;3.7124;3.6909;3.5682;3.2207 -;-;-;-;-;-;-;-;-;- 871 1 1.789 62604.2 1.0 3775 4519 8288 HBL1_DMSO_200M_050219_2,8296 HBL1_DMSO_200M_050219_2,8296,ISLIMMLSAL False False RYQEKISAL 45.005902 554.31260985136 3662804.75 8288.0 ENSG00000173230|ENST00000614479|GOLGB1;;nc|ENSG00000173230|Q14789-4|GOLGB1;;nc|ENSG00000173230|Q14789-2|GOLGB1;;nc|ENSG00000173230|Q14789|GOLGB1;;nc|ENSG00000173230|Q14789-3|GOLGB1 6.378395239512126 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8297 45.011 304.0 418720.0 25 0 47050.0 12297 GSDLRHHPHH 10 123 398.1945566574013 1191.561840572404 3 398.1946288943291 MULTI CID FTMS 0 0 0 8288 197383.0 0.2239809792678473 -2 0.2239913940429687 9 Unmodified _GSDLRHHPHH_ ENST00000404970.3_1_17:8064789-8064941:-|nuORF;ENST00000498285.1_2_17:8054153-8064944:-|nuORF 13.90604991867851 0.6142120002215601 4 [SG]DAVVHPAD[QP] 12 7 + 46.243 0.0 0.0 3.8809 3.8809 74.17 0.0 0.0 0.0 14.68043718954397 22.165050478616635 14.68043718954397 6.611814434466183 0 0.2742275032520141 1.0457574905606752 0.9274913471593704 0.0 [SG]DAVVHPAD[QP];[SG]DAVVHPW[QP];[SG]EGVVHPAD[QP];{[DS]|[MA]|[CV]|TT}GAVVHPAD[QP];[SG]EGVVHPW[QP];{[DS]|[MA]|[CV]|TT}GAVVHPW[QP];{[DS]|[MA]|[CV]|TT}QVVHPAD[QP];{[DA]|[EG]}SGVVHPAD[QP];{[DS]|[MA]|[CV]|TT}AGVVHPAD[QP];{[DS]|[MA]|[CV]|TT}GAVVH{[{M(Oxidation (M))|F}H]|[RQ]}[HS] 3.8809;3.326;2.6874;2.6312;2.1325;2.0763;1.7568;1.7191;1.4377;1.4276 -;-;-;-;-;-;-;-;-;- 327 1 1.789 107994.8 1.0 3776 4519 8288 HBL1_DMSO_200M_050219_2,8297 HBL1_DMSO_200M_050219_2,8297,GSDLRHHPHH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8298 45.025 800.0 236920.0 25 0 15567.0 + 43087 VYMNRVKEI 9 159 576.3164759532553 1150.6183989733106 2 576.3168823122978 MULTI CID FTMS 0 0 0 8288 154367.0 0.3568695199357717 -2 0.2239913940429687 10 Unmodified _VYMNRVKEI_ ENSG00000197223|ENST00000410067|C1D;ENST00000455013.2_1_10:81784495-81784867:-|nuORF 67.08073823543168 0.0222274355215578 4 VYMN 4 5 60.494 0.0 0.0 5.2576 0.0 0.0 0.0 640.3797701471311 640.3797701471311 19.336068845642203 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.6694451763165201 + VYMN 5.2576 + + 593 + 1 1.789 144056.7 0.7099999785423279 3777 4519 8288 HBL1_DMSO_200M_050219_2,8298 HBL1_DMSO_200M_050219_2,8298,VYMNRVKEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8299 45.03 245.0 240420.0 25 0 11109.0 -1 AMILTVCR 8 104 482.2608337484281 962.5071145636564 2 482.2613098025322 MULTI CID FTMS 0 0 0 8288 148660.96875 0.5762804464511392 1 -0.1212921142578125 11 Carbamidomethyl (C) _AMILTVC(Carbamidomethyl (C))R_ ENSG00000140534|ENST00000268138|TICRR;nc|ENSG00000140534|Q7Z2Z1-2|TICRR 15.847184025352805 0.6768015514314958 4 {[DS]|[MA]|[CV]|TT}{I|L}A 4 -1 37.435 0.0 0.0 3.8893 0.0 0.0 0.0 573.2902926080686 573.2902926080686 24.960762528683706 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}{I|L}A 3.8893 - 188 + 1 1.789 50052.0 1.0 3778 4519 8288 HBL1_DMSO_200M_050219_2,8299 HBL1_DMSO_200M_050219_2,8299,AMILTVCR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8300 45.039 529.0 246820.0 25 0 18145.0 + 39170 TYPEGNASL 9 156 476.2243683882854 950.4341838433708 2 476.2251464724541 MULTI CID FTMS 0 0 0 8288 121992.7109375 0.7855825616814243 4 -0.3693161010742187 12 Unmodified _TYPEGNASL_ ENST00000287022.9_1_8:97247747-97247798:-|nuORF 15.847184025352805 0.4077185912009129 4 [EP]GNAS 6 3 18.778 0.0 0.0 1.9757 0.0 0.0 0.0 392.1808628807334 392.1808628807334 -1.5381768443112875 0.0 -1.5381768443112875 0.0 0 0.0 0.6989700043360187 0.3807196863200844 0.2742275032520141 + [EP]GNAS 1.9757 + + 186 1 1.789 104704.0 1.0 3779 4519 8288 HBL1_DMSO_200M_050219_2,8300 HBL1_DMSO_200M_050219_2,8300,TYPEGNASL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8301 45.045 331.0 333130.0 25 0 29578.0 + 34713 SPYAKASW 8 136 455.2279312804328 908.4413096276656 2 455.2267944216728 MULTI CID FTMS 0 0 0 8288 118846.7109375 0.8301922121047871 -1 0.0911407470703125 13 Unmodified _SPYAKASW_ REV__ENSG00000114841|ENST00000420323|DNAH1;REV__ENST00000486752.5_1_3:52422617-52434459:+|nuORF;REV__ENST00000488988.5_1_3:52422617-52433783:+|nuORF;REV__nc|ENSG00000114841|Q9P2D7-8|DNAH1 22.736283301280096 0.5659792798204337 4 SPYANMKV 8 -1 + 66.537 0.0 0.0 7.3243 7.3243 85.537 0.0 0.0 0.0 56.34745277947189 11.40978057358332 11.40978057358332 5.16039320750032 0 0.805462187404089 1.6989700043360187 0.0 0.1595680409956017 SPYANMKV;SPY[C(Carbamidomethyl (C))R]KV;SPYAGGMKV;SP[{I|L}P]{M(Oxidation (M))|F}[WY];SP[{I|L}P]{M(Oxidation (M))|F}[HD]P;SP[{I|L}P][Y{M(Oxidation (M))|F}]SV;SP[RN][H{I|L}]{[DA]|[EG]};[Y{M(Oxidation (M))|F}]PQQKV 7.3243;6.7563;6.3047;4.2932;3.3272;2.9348;2.2691;1.0788 -;-;-;-;-;-;-;- 340 + 1 1.789 88581.7 1.0 3780 4519 8288 HBL1_DMSO_200M_050219_2,8301 HBL1_DMSO_200M_050219_2,8301,SPYAKASW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8302 45.057 637.0 149310.0 25 0 9837.3 + -1 PFCQRATL 8 142 496.7552043928333 0 496.7550842165947 PEAK CID FTMS 0 0 0 8288 116208.328125 1.0 0 0.0 14 Carbamidomethyl (C) _PFC(Carbamidomethyl (C))QRATL_ REV__ENSG00000019991|ENST00000222390|HGF;REV__nc|ENSG00000019991|P14210-3|HGF 19.438996006549623 0.4285751805470146 4 MQR 3 -1 24.253 0.0 0.0 2.4461 0.0 0.0 212.1557030687333 361.1118563287719 573.2675593975052 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 MQR 2.4461 - 157 + 1 1.789 73158.4 1.0 3781 4519 8288 HBL1_DMSO_200M_050219_2,8302 HBL1_DMSO_200M_050219_2,8302,PFCQRATL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8303 45.071 800.0 214250.0 25 0 15476.0 + -1 CKGWQKDVCFY 11 116 745.8302961339458 1489.6460393346915 2 745.8308593630791 MULTI CID FTMS 0 0 0 8288 107226.921875 1.0 0 0.0 15 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))KGWQKDVC(Carbamidomethyl (C))FY_ REV__ENST00000375640.7_1_6:31802385-31802835:+|nuORF 10.799506525563784 0.8105043987015127 4 {[HG]|PP}QPPPMCQDA{M(Oxidation (M))|F}Y 13 -1 + 90.795 0.0 0.0 6.0951 6.0951 75.648 0.0 0.0 0.0 1.7609125905568137 10.696083918116416 1.7609125905568137 1.7609125905568137 0 1.1237125054200234 0.0 0.0 2.2104093769761874 {[HG]|PP}QPPPMCQDA{M(Oxidation (M))|F}Y;[QP]PPPPMCQDA{M(Oxidation (M))|F}Y;{[HG]|PP}QPPMPCQDA{M(Oxidation (M))|F}Y;{[HG]|PP}QPMPPCQDA{M(Oxidation (M))|F}Y;[QP]PPPMPCQDA{M(Oxidation (M))|F}Y;[QP]PPMPPCQDA{M(Oxidation (M))|F}Y;{[HG]|PP}QPPD{I|L}CQDA{M(Oxidation (M))|F}Y;{[HG]|PP}QPPPMC[AG]DA{M(Oxidation (M))|F}Y;[QP]PPPD{I|L}CQDA{M(Oxidation (M))|F}Y;[QP]PPPPMC[AG]DA{M(Oxidation (M))|F}Y 6.0951;5.9769;5.6909;5.6827;5.5727;5.5645;5.5278;5.4861;5.4096;5.3679 -;-;-;-;-;-;-;-;-;- 5736 1 1.789 122729.6 0.4900000095367431 3782 4519 8288 HBL1_DMSO_200M_050219_2,8303 HBL1_DMSO_200M_050219_2,8303,CKGWQKDVCFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8304 45.075 204.0 240840.0 25 0 28284.0 + 43169 LPHAQTYV 8 91 464.7480581309684 0 464.7473937869072 PEAK CID FTMS 0 0 0 8288 106993.921875 1.0 0 0.0 16 Unmodified _VYRSAFSV_ nc|ENSG00000103005|Q9BQ65-3|USB1;nc|ENSG00000103005|Q9BQ65-2|USB1;ENSG00000103005|ENST00000219281|USB1;ENST00000566292.5_1_16:58035387-58044017:+|nuORF;ENST00000565662.5_1_16:58035387-58051252:+|nuORF 20.871210003555333 0.4015059659087983 4 D 1 8 11.352 0.0 0.0 1.2239 0.0 0.0 280.1414276859618 529.3011333900171 809.4425610759788 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.3494850021680094 0.0 D 1.2239 - 63 + 1 1.789 43467.9 1.0 3783 4519 8288 HBL1_DMSO_200M_050219_2,8304 HBL1_DMSO_200M_050219_2,8304,VYRSAFSV False False LPHAQTYV 45.075145 464.747393786907 5253598.0 8288.0 nc|ENSG00000103005|Q9BQ65-3|USB1;;nc|ENSG00000103005|Q9BQ65-2|USB1;;ENSG00000103005|ENST00000219281|USB1;;ENST00000566292.5_1_16:58035387-58044017:+|nuORF;;ENST00000565662.5_1_16:58035387-58051252:+|nuORF 2.0652029514312744 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8305 45.08 249.0 288810.0 25 0 27664.0 + 16530 KAVESLRAI 9 98 492.2974984222936 982.5804439113872 2 493.8034850955009 MULTI CID FTMS 0 0 0 8288 102155.9765625 0.0572711348923317 -8 0.7047309875488281 17 Unmodified _KAVDGGIPVK_ ENST00000468280.5_1_19:52693376-52714746:+|nuORF;ENSG00000105568|ENST00000322088|PPP2R1A 9.38312468134398 0.6832340498775793 4 AVE 3 8 16.198 0.0 0.0 1.6485 0.0 0.0 125.08201957390732 555.3263093859254 680.4083289598327 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AVE 1.6485 - 76 + 1 1.789 62014.3 1.0 3784 4519 8288 HBL1_DMSO_200M_050219_2,8305 HBL1_DMSO_200M_050219_2,8305,KAVDGGIPVK False False KAVESLRAI 45.079778 493.803485095501 22826326.0 8288.0 ENST00000468280.5_1_19:52693376-52714746:+|nuORF;;ENSG00000105568|ENST00000322088|PPP2R1A 0.2817577887326479 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8306 45.095 800.0 75717.0 25 0 19387.0 -1 LRCAMSDVEMQ 11 86 670.2911420472059 1338.5677311612117 2 670.2921630740166 MULTI CID FTMS 0 0 0 8288 96018.09375 0.3187886446721126 2 -0.2076530456542968 18 Carbamidomethyl (C) _LRC(Carbamidomethyl (C))AMSDVEMQ_ ENST00000393668.3_1_11:71991299-71991795:+|nuORF 2.735195868890462 0.8622431031272658 4 {M(Oxidation (M))|F} 1 -1 11.594 0.0 0.0 0.86613 0.0 0.0 1173.488597105351 0.0 1173.488597105351 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.86613 + + 28 + 1 1.789 50113.1 0.4900000095367431 3785 4519 8288 HBL1_DMSO_200M_050219_2,8306 HBL1_DMSO_200M_050219_2,8306,LRCAMSDVEMQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8307 45.102 415.0 335370.0 25 0 37621.0 -1 CPNARCQFAFY 11 106 717.3065335155635 1432.598514097927 2 717.3081542849541 MULTI CID FTMS 0 0 0 8288 82393.25 0.0921970459280172 -4 0.4415664672851562 19 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PNARC(Carbamidomethyl (C))QFAFY_ ENSG00000129353|ENST00000335757|SLC44A2;ENST00000589561.5_1_19:10746968-10754058:+|nuORF;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;nc|ENSG00000129353|Q8IWA5-3|SLC44A2 13.90604991867851 0.7458848613461305 4 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 97.405 0.0 0.0 6.7992 6.7992 76.62 0.0 0.0 0.0 0.8175866893543571 11.382353118286233 0.8175866893543571 0.8175866893543571 0 0.8935078169319297 1.154901959985743 1.0114393726401687 1.5994850021680094 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQNA{M(Oxidation (M))|F}Y;[NP]HDEAQQNA{M(Oxidation (M))|F}Y 6.7992;6.7421;6.1641;6.1641;6.1641;6.1089;6.1089;5.8818;5.8701;5.7829 -;-;-;-;-;-;-;-;-;- 6150 1 1.789 101295.4 1.0 3786 4519 8288 HBL1_DMSO_200M_050219_2,8307 HBL1_DMSO_200M_050219_2,8307,CPNARCQFAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8309 45.107 14.0 3646700.0 25 0 383710.0 + 24993 MPPPPPQGV 9 76 460.23852327962805 918.462493626056 2 460.2389709353447 MULTI CID FTMS 0 0 0 8308 4083298.0 0.2203371392451756 62 -5.094047546386719 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 67.03532852164291 0.0222449892513529 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 43.862 0.0 0.0 4.7756 4.7756 81.708 0.0 0.0 0.0 3.098943791441968 21.64320017660792 3.098943791441968 9.798187706630152 0 1.6237125054200234 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;[VG][EP]HPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQGV;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR 4.7756;3.7088;3.1917;2.5501;1.9494;1.5689 -;+;-;-;-;- + 133 1 1.795 46081.7 1.0 3787 4520 8308 HBL1_DMSO_200M_050219_2,8309 HBL1_DMSO_200M_050219_2,8309,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8310 45.108 58.0 915050.0 25 0 85380.0 + 12948 HAFKISKI 8 87 472.2895465415244 942.5645401498488 2 472.2899047732353 MULTI CID FTMS 0 0 0 8308 719733.25 0.2865997035779306 2 -0.1673316955566406 2 Unmodified _HAFKISKI_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4 41.8396318013385 0.2035142800366642 4 [HA]{M(Oxidation (M))|F}K{I|L}SK{I|L} 8 0 + 51.187 0.0 0.0 5.4306 5.4306 87.601 0.0 0.0 0.0 10.602450132300142 20.15578724019952 10.602450132300142 26.249387366082992 0 1.4353805887553706 1.6989700043360187 0.0 0.0 + + [HA]{M(Oxidation (M))|F}K{I|L}SK{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}AHSK{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AH{I|L}SK{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{I|L}HSK{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[KS]AH{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}A[KS]H{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{I|L}[KS]H{I|L} 5.4306;2.6457;2.6457;2.6457;2.6031;2.2838;2.2838 +;-;-;-;-;-;- + 171 1 1.795 48628.0 1.0 3788 4520 8308 HBL1_DMSO_200M_050219_2,8310 HBL1_DMSO_200M_050219_2,8310,HAFKISKI False True HAFKISKI 45.108284 472.289904773235 331308716.0 8308.0 ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 4.740891297658284 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8311 45.109 18.0 2964500.0 25 0 240260.0 + 13025 HASQPSLTV 9 78 470.248038865904 938.481524798608 2 470.2484619021416 MULTI CID FTMS 0 0 0 8308 3269129.75 0.3797924677444801 -6 0.6329727172851562 3 Unmodified _HASQPSLTV_ ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000175387|Q15796-2|SMAD2 49.93300154707207 0.0405168250806675 4 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TV 8 5 + 59.524 0.0 0.0 6.3425 6.3425 84.6 0.0 0.0 0.0 7.410488013318641 16.40978057358332 7.410488013318641 7.410488013318641 0 0.8494850021680094 1.2218487496163564 0.9247425010840048 0.0 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TV;[HA]{[QS]|[NT]}[PS]{I|L}TV;[{I|L}T]V{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TV;{[TV]|[{I|L}S]}[TP]A[HN]TV;[HT]{[QG]|[NA]}[PS]{I|L}TV;[{I|L}T][PS]A[HN]TV 6.3425;5.5529;4.853;3.6676;3.5251;2.178 -;+;-;-;-;- + 220 1 1.795 50671.9 1.0 3789 4520 8308 HBL1_DMSO_200M_050219_2,8311 HBL1_DMSO_200M_050219_2,8311,HASQPSLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8312 45.111 32.0 1358300.0 25 0 180760.0 + 7982 ELWMQRRGQ 9 68 602.3082280897272 1202.6019032462543 2 602.3091308474541 MULTI CID FTMS 0 0 0 8308 1709448.625 1.0 0 0.0 4 Unmodified _ELWMQRRGQ_ REV__ENST00000366663.9_1_1:230974343-230974889:-|nuORF 7.289230182591677 0.6602208344931196 4 [VP]SQ{I|L}SQE{I|L} 9 -1 40.288 0.0 0.0 3.3501 0.0 0.0 0.0 218.06275464689807 218.06275464689807 28.69456889533673 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.4247425010840047 [VP]SQ{I|L}SQE{I|L} 3.3501 - 117 1 1.795 36529.3 1.0 3790 4520 8308 HBL1_DMSO_200M_050219_2,8312 HBL1_DMSO_200M_050219_2,8312,ELWMQRRGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8313 45.112 54.0 1232400.0 25 0 208660.0 + 37090 TGPISVAR 8 73 400.734608777641 799.454664622082 2 400.7348815798759 MULTI CID FTMS 0 0 0 8308 1192770.375 0.6624580035042611 -1 0.1212921142578125 5 Unmodified _TGPISVAR_ REV__ENST00000492010.1_1_3:137831300-137834397:-|nuORF 14.838274106304384 0.6917062315640577 4 {[SA]|[TG]}PSA 5 -1 44.961 0.0 0.0 5.6239 0.0 0.0 0.0 383.2416170709594 383.2416170709594 36.00833760139686 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[SA]|[TG]}PSA 5.6239 - 36 + 1 1.795 57198.2 1.0 3791 4520 8308 HBL1_DMSO_200M_050219_2,8313 HBL1_DMSO_200M_050219_2,8313,TGPISVAR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8314 45.113 50.0 1252600.0 25 0 220660.0 + 36316 SYISRTNQL 9 75 541.2828446597806 1080.5511363863611 2 541.2856933474541 MULTI CID FTMS 0 0 0 8308 851074.4375 0.2052856646313967 -3 0.3452835083007812 6 Unmodified _SYLMVIQDI_ ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1 24.020572477871973 0.2255576514309169 4 [EP]{M(Oxidation (M))|F}{[NV]|[RG]}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}{I|L} 9 6 + 22.584 0.0 0.0 2.0901 2.0901 65.974 0.0 0.0 0.0 1.7855254091623678 4.96468271239106 1.7855254091623678 3.010299956639816 0 0.2215141619232908 1.154901959985743 0.0 0.0 [EP]{M(Oxidation (M))|F}{[NV]|[RG]}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}{I|L};[EP]{M(Oxidation (M))|F}VVQ{[{M(Oxidation (M))|F}C]|[YS]}{I|L};{[QN]|[E{I|L}]|[KN]}M{[NV]|[RG]}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}{I|L};{[QN]|[E{I|L}]|[KN]}MVVQ{[{M(Oxidation (M))|F}C]|[YS]}{I|L} 2.0901;1.8115;1.2575;0.9789 -;-;-;- 153 1 1.795 53966.8 1.0 3792 4520 8308 HBL1_DMSO_200M_050219_2,8314 HBL1_DMSO_200M_050219_2,8314,SYLMVIQDI False False SYISRTNQL 45.113346 541.285693347454 30354976.0 8308.0 ENSG00000153207|ENST00000648844|AHCTF1;;nc|ENSG00000153207|Q8WYP5-2|AHCTF1;;nc|ENSG00000153207|Q8WYP5-3|AHCTF1 5.690805117289226 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8315 45.118 232.0 1058500.0 25 0 217810.0 + 6434 EAEARFREI 9 125 374.1960803839163 1119.5664117519489 3 374.1960937380791 MULTI CID FTMS 0 0 0 8308 369435.09375 0.8817265275515603 -1 0.1212921142578125 7 Unmodified _EAEARFREI_ ENSG00000109685|ENST00000508803|NSD2;ENST00000353275.9_2_4:1944147-1980633:+|nuORF;nc|ENSG00000109685|O96028-2|NSD2;nc|ENSG00000109685|O96028-4|NSD2 28.49450938151212 0.1686335738423394 4 EA{I|L}EN{M(Oxidation (M))|F}{[RE]|[WV]}{I|L} 9 3 + 64.422 0.0 0.0 5.7542 5.7542 72.521 0.0 0.0 0.0 44.95836429720191 1.5200544073856506 1.5200544073856506 0.796896906561031 0 0.4581706663129559 1.3010299956639813 1.2302046884880935 0.0 EA{I|L}EN{M(Oxidation (M))|F}{[RE]|[WV]}{I|L};EAE{I|L}N{M(Oxidation (M))|F}{[RE]|[WV]}{I|L};EAEAR{M(Oxidation (M))|F}{[RE]|[WV]}{I|L};EA{I|L}EN{M(Oxidation (M))|F}[W{I|L}]V;EAEAR{M(Oxidation (M))|F}[W{I|L}]V;EAE{I|L}N{M(Oxidation (M))|F}[W{I|L}]V;EA{I|L}EGG{M(Oxidation (M))|F}{[RE]|[WV]}{I|L};EAE{I|L}GG{M(Oxidation (M))|F}{[RE]|[WV]}{I|L};EAEA[VG]{M(Oxidation (M))|F}{[RE]|[WV]}{I|L};EA{I|L}E[RK]D{M(Oxidation (M))|F}{I|L} 5.7542;5.683;5.3469;5.1813;5.1534;5.1101;4.9317;4.8606;4.5245;4.4816 -;-;+;-;-;-;-;-;-;- + 270 + 1 1.795 196666.3 1.0 3793 4520 8308 HBL1_DMSO_200M_050219_2,8315 HBL1_DMSO_200M_050219_2,8315,EAEARFREI False True EAEARFREI 45.1177 374.196093738079 3005433.0 8308.0 nc|ENSG00000109685|O96028-4|NSD2;;ENST00000353275.9_2_4:1944147-1980633:+|nuORF;;nc|ENSG00000109685|O96028-2|NSD2;;ENSG00000109685|ENST00000508803|NSD2 1.149695634841919 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8316 45.123 265.0 262580.0 25 0 17620.0 + 15143 KVMPKMDQDSL 11 113 645.8239092609051 1289.63326558861 2 646.3246337771416 MULTI CID FTMS 0 0 0 8308 291669.53125 0.9983164271889522 1 -0.0863609313964843 8 Unmodified _INTVTYEWAPP_ ENSG00000079459|ENST00000220584|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 23.78978130925829 0.5336113198261219 4 {[QV]|[N{I|L}]|[RA]|[KV]}TVTV 6 6 45.003 0.0 0.0 3.4896 0.0 0.0 0.0 659.2462165986288 659.2462165986288 19.784275020433284 0.0 0.0 0.0 0 0.3494850021680094 0.8538719643217619 1.3494850021680094 0.4604093769761876 {[QV]|[N{I|L}]|[RA]|[KV]}TVTV 3.4896 - 1194 1 1.795 60270.5 1.0 3794 4520 8308 HBL1_DMSO_200M_050219_2,8316 HBL1_DMSO_200M_050219_2,8316,INTVTYEWAPP False False KVMPKMDQDSL 45.122613 646.324633777142 2799326.75 8308.0 ENSG00000079459|ENST00000220584|FDFT1;;nc|ENSG00000079459|P37268-5|FDFT1 2.168460468451182 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8317 45.129 333.0 285520.0 25 0 35827.0 37534 TLHPVWSQQ 9 112 548.2824597880839 1094.5503666429677 2 548.2832519412041 MULTI CID FTMS 0 0 0 8308 228440.796875 0.1935495678849823 16 -1.1330070495605469 9 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 17.86316937532769 0.3531482428618743 4 [VS]PHEPPHPV 10 9 + 67.45 0.0 0.0 6.1624 6.1624 88.541 0.0 0.0 0.0 10.929862658764264 7.626656038284452 7.626656038284452 12.740181612806936 0 2.527310937020445 0.7958800173440752 0.2614393726401688 0.0 [VS]PHEPPHPV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSEPPHPV;[{I|L}T]HPPER{M(Oxidation (M))|F}V;[YT]REPPHPV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PESVPHPV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[MS]|[{M(Oxidation (M))|F}A]}PPHPV;{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EHP[PA];[{I|L}T]H[WH]H[HK];{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]ER{M(Oxidation (M))|F}V;[{I|L}T]HPP[RD]{M(Oxidation (M))|F}{I|L} 6.1624;4.9984;4.8629;4.7652;4.1464;3.8511;3.4366;3.2596;3.1406;3.1238 -;-;-;-;-;-;-;-;-;- 663 1 1.795 76964.5 1.0 3795 4520 8308 HBL1_DMSO_200M_050219_2,8317 HBL1_DMSO_200M_050219_2,8317,TLHPVWSQQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8318 45.132 198.0 449200.0 25 0 81208.0 + + 45017 TPYPGFKSHV 10 116 378.1954555901101 1131.5645373705302 3 378.5294982790947 MULTI CID FTMS 0 0 0 8308 209088.875 1.0 0 0.0 10 Unmodified _YPTPVEQLW_ nc|ENSG00000151332|Q9NS73-2|MBIP;nc|ENSG00000151332|Q9NS73-5|MBIP;nc|ENSG00000151332|Q9NS73-3|MBIP;ENSG00000151332|ENST00000416007|MBIP 10.073929032068715 0.563993802247229 4 TPYV{[DS]|[MA]|[CV]|TT}KSHV 10 -1 + 37.935 0.0 0.0 3.3525 3.3525 62.806 0.0 0.0 0.0 20.85684068375429 6.77108148272638 6.77108148272638 0.4600254412747517 0 0.0 0.638272163982407 0.5 0.0 TPYV{[DS]|[MA]|[CV]|TT}KSHV;TPYVN[R{M(Oxidation (M))|F}]HV;TPYV[RH]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V;TPYV[{M(Oxidation (M))|F}V][NG]HV;TPYVGG[R{M(Oxidation (M))|F}]HV;TPYP[KP]{M(Oxidation (M))|F}[WP];TP{[ES]|[DT]|[{I|L}C]}[R{I|L}]{M(Oxidation (M))|F}[WP] 3.3525;3.3118;2.8247;2.498;2.498;2.1573;0.57019 -;-;-;-;-;-;- 312 + 1 1.795 82334.0 1.0 3796 4520 8308 HBL1_DMSO_200M_050219_2,8318 HBL1_DMSO_200M_050219_2,8318,YPTPVEQLW False False TPYPGFKSHV 45.132436 378.529498279095 1585253.375 8308.0 nc|ENSG00000151332|Q9NS73-2|MBIP;;nc|ENSG00000151332|Q9NS73-5|MBIP;;nc|ENSG00000151332|Q9NS73-3|MBIP;;ENSG00000151332|ENST00000416007|MBIP 5.4857048988342285 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8319 45.146 800.0 169310.0 25 0 10845.0 + 40233 VGSGTLFYAFM 11 133 596.7879620224343 1191.5613711116684 2 596.7890502810478 MULTI CID FTMS 0 0 0 8308 177662.703125 0.6350845614819397 -1 0.1212921142578125 11 Unmodified _VGSGTLFYAFM_ REV__ENST00000566834.5_2_16:68298472-68307791:+|nuORF;REV__ENST00000568088.5_3_16:68298472-68307791:+|nuORF 27.628801355627647 0.4434699450731472 4 VGSDAP[HV]VAD 11 -1 93.656 0.0 0.0 7.8599 0.0 0.0 0.0 141.03081690006096 141.03081690006096 41.17273142559679 0.0 0.0 0.0 0 1.2205165412400896 2.0 1.6254223615525998 0.0 VGSDAP[HV]VAD 7.8599 - 1826 + 1 1.795 107361.2 0.7799999713897705 3797 4520 8308 HBL1_DMSO_200M_050219_2,8319 HBL1_DMSO_200M_050219_2,8319,VGSGTLFYAFM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8320 45.16 800.0 109610.0 25 0 9844.1 -1 INCREESTVLQ 11 114 674.8274393906415 1347.640325848083 2 674.8284179568291 MULTI CID FTMS 0 0 0 8308 157806.328125 0.5383273695699033 1 -0.0863609313964843 12 Carbamidomethyl (C) _INC(Carbamidomethyl (C))REESTVLQ_ ENST00000367434.4_1_1:193155339-193155666:-|nuORF 38.61474834105838 0.2337350513322792 4 {I|L}NEEQRAT{M(Oxidation (M))|F}{I|L}Q 11 -1 + 81.418 0.0 0.0 6.0415 6.0415 87.787 0.0 0.0 0.0 12.074732896553344 16.118198286171193 12.074732896553344 12.074732896553344 0 1.917735320183944 0.7695510786217261 0.0 1.4604093769761874 {I|L}NEEQRAT{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}VQ[WE]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}E[DG][Q{I|L}]DG{M(Oxidation (M))|F}{I|L}Q;{I|L}NE{[WS]|[C(Carbamidomethyl (C)){I|L}]}WWS{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}E{[MG]|[TS]}[QP]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}V[AG][WE]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}V[DC][QP]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}E[DG]N{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}[WD][Q{I|L}]DG{M(Oxidation (M))|F}{I|L}Q;{[NV]|[RG]}{I|L}Q[WE]DG{M(Oxidation (M))|F}{I|L}Q 6.0415;5.1455;4.5442;4.5067;4.4946;4.4681;4.3597;4.1255;3.9188;3.9144 -;-;-;-;-;-;-;-;-;- 762 + 1 1.795 69338.2 0.7099999785423279 3798 4520 8308 HBL1_DMSO_200M_050219_2,8320 HBL1_DMSO_200M_050219_2,8320,INCREESTVLQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8321 45.165 240.0 458180.0 25 0 29450.0 27794 PLPPPPPPP 9 120 454.7637970492512 907.5130411653024 2 454.7644836306572 MULTI CID FTMS 0 0 0 8308 154785.0625 0.2666130331752534 -2 0.212432861328125 13 Unmodified _PLPPPPPPP_ ENSG00000009694|ENST00000371130|TENM1;ENSG00000100312|ENST00000216139|ACR;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000117560|ENST00000367721|FASLG;ENSG00000124496|ENST00000695948|TRERF1;ENSG00000126460|ENST00000246794|PRRG2;ENSG00000132510|ENST00000448097|KDM6B;ENSG00000138771|ENST00000296043|SHROOM3;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000141456|ENST00000572293|PELP1;ENSG00000146083|ENST00000274811|RNF44;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000160685|ENST00000535420|ZBTB7B;ENSG00000170234|ENST00000307063|PWWP2A;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000175073|ENST00000310421|VCPIP1;ENSG00000175785|ENST00000393140|PRIMA1;ENSG00000176182|ENST00000322217|MYPOP;ENSG00000188779|ENST00000380035|SKOR1;ENSG00000204334|ENST00000697325|ERICH2;ENSG00000248905|ENST00000616417|FMN1;ENSG00000259956|ENST00000563281|RBM15B;ENST00000361272.8_2_8:17102747-17104366:-|nuORF;ENST00000379565.7_1_X:20227482-20284914:-|nuORF;ENST00000508096.1_1_10:126605730-126631034:+|nuORF;ENST00000508478.1_1_5:175957081-175957609:-|nuORF;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENST00000596700.5_1_19:50084718-50093643:+|nuORF;ENST00000597121.5_1_19:50086773-50093643:+|nuORF;nc|ENSG00000009694|Q9UKZ4-2|TENM1;nc|ENSG00000110076|P58401|NRXN2;nc|ENSG00000117560|P48023-2|FASLG;nc|ENSG00000124496|Q96PN7|TRERF1;nc|ENSG00000132510|O15054-1|KDM6B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000146083|Q7L0R7-2|RNF44;nc|ENSG00000160685|O15156-2|ZBTB7B;nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170234|Q96N64-2|PWWP2A;nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000175785|Q86XR5-2|PRIMA1;nc|ENSG00000188779|P84550-3|SKOR1;nc|ENSG00000248905|Q68DA7-5|FMN1;REV__ENSG00000048991|ENST00000683871|R3HDM1;REV__ENSG00000066855|ENST00000262146|MTFR1;REV__ENSG00000068489|ENST00000262293|PRR11;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000100592|ENST00000360909|DAAM1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000119596|ENST00000325680|YLPM1;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000125740|ENST00000353609|FOSB;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__ENSG00000132510|ENST00000448097|KDM6B;REV__ENSG00000135250|ENST00000393651|SRPK2;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138081|ENST00000403359|FBXO11;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__ENSG00000141431|ENST00000269197|ASXL3;REV__ENSG00000145414|ENST00000274054|NAF1;REV__ENSG00000146122|ENST00000274867|DAAM2;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152409|ENST00000396137|JMY;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000157827|ENST00000288670|FMNL2;REV__ENSG00000162775|ENST00000369784|RBM15;REV__ENSG00000164916|ENST00000328914|FOXK1;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000173166|ENST00000319170|RAPH1;REV__ENSG00000173917|ENST00000330070|HOXB2;REV__ENSG00000175073|ENST00000310421|VCPIP1;REV__ENSG00000176624|ENST00000406189|MEX3C;REV__ENSG00000186472|ENST00000333891|PCLO;REV__ENSG00000187017|ENST00000645284|ESPN;REV__ENSG00000187164|ENST00000355371|SHTN1;REV__ENSG00000203485|ENST00000392634|INF2;REV__ENSG00000215045|ENST00000457091|GRID2IP;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000274209|ENST00000620264|ANTXRL;REV__ENST00000324225.8_1_11:117049861-117050083:+|nuORF;REV__ENST00000358635.7_1_4:140005384-140005639:-|nuORF;REV__ENST00000368219.1_1_1:156698226-156698472:-|nuORF;REV__ENST00000379565.7_1_X:20227482-20284914:-|nuORF;REV__ENST00000424808.6_1_8:66582187-66620357:+|nuORF;REV__ENST00000471339.1_1_5:173036657-173043649:-|nuORF;REV__ENST00000519935.1_1_7:27209203-27211037:+|nuORF;REV__ENST00000587358.1_1_19:45974364-45976267:+|nuORF;REV__nc|ENSG00000048991|Q15032-2|R3HDM1;REV__nc|ENSG00000048991|Q15032-3|R3HDM1;REV__nc|ENSG00000048991|Q15032-4|R3HDM1;REV__nc|ENSG00000048991|Q15032|R3HDM1;REV__nc|ENSG00000066855|Q15390-2|MTFR1;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100592|Q9Y4D1-3|DAAM1;REV__nc|ENSG00000100592|Q9Y4D1|DAAM1;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000119596|P49750-1|YLPM1;REV__nc|ENSG00000119596|P49750-3|YLPM1;REV__nc|ENSG00000125740|P53539-10|FOSB;REV__nc|ENSG00000125740|P53539-2|FOSB;REV__nc|ENSG00000125740|P53539-3|FOSB;REV__nc|ENSG00000125740|P53539-5|FOSB;REV__nc|ENSG00000125740|P53539-8|FOSB;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1;REV__nc|ENSG00000132510|O15054-1|KDM6B;REV__nc|ENSG00000135250|P78362|SRPK2;REV__nc|ENSG00000138081|Q86XK2-4|FBXO11;REV__nc|ENSG00000138081|Q86XK2-5|FBXO11;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3;REV__nc|ENSG00000140836|Q15911-2|ZFHX3;REV__nc|ENSG00000146122|Q86T65-4|DAAM2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000157827|Q96PY5|FMNL2;REV__nc|ENSG00000162775|Q96T37-2|RBM15;REV__nc|ENSG00000162775|Q96T37-3|RBM15;REV__nc|ENSG00000162775|Q96T37-4|RBM15;REV__nc|ENSG00000170004|Q12873-3|CHD3;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__nc|ENSG00000187017|B1AK53-2|ESPN;REV__nc|ENSG00000187164|A0MZ66-2|SHTN1;REV__nc|ENSG00000187164|A0MZ66-3|SHTN1;REV__nc|ENSG00000187164|A0MZ66-4|SHTN1;REV__nc|ENSG00000187164|A0MZ66-5|SHTN1;REV__nc|ENSG00000187164|A0MZ66-6|SHTN1;REV__nc|ENSG00000187164|A0MZ66-8|SHTN1;REV__nc|ENSG00000203485|Q27J81-2|INF2;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__PCLO|p.V3720Sfs*2|1|0.13|ENSG00000186472|chr7:82916828-82916829|-/T|frameshift_variant 36.46614268402704 0.0948557732959553 4 {[VA]|[{I|L}G]}VP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EV 8 6 34.384 0.0 0.0 3.7888 0.0 0.0 0.0 66.03569971256093 66.03569971256093 3.719005324262241 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8252574989159953 0.0 {[VA]|[{I|L}G]}VP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EV 3.7888 - 517 + 1 1.795 87280.4 1.0 3799 4520 8308 HBL1_DMSO_200M_050219_2,8321 HBL1_DMSO_200M_050219_2,8321,PLPPPPPPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8322 45.174 512.0 282210.0 25 0 13702.0 + 41478 VPLRQPRAL 9 187 350.5575329675178 1048.6507695027533 3 350.5570861697197 MULTI CID FTMS 0 0 0 8308 114286.5859375 0.7599814865765732 1 -0.0863609313964843 14 Unmodified _VPLRQPRAL_ REV__ENSG00000176387|ENST00000326152|HSD11B2 4.5288652416199255 0.7565837746943351 4 VVK 3 -1 29.671 0.0 0.0 2.8295 0.0 0.0 0.0 719.3987520807249 719.3987520807249 22.681537131799047 0.0 0.0 0.0 0 0.0731074559755159 0.0 0.0 0.4247425010840047 VVK 2.8295 - 39 + 1 1.795 122232.8 1.0 3800 4520 8308 HBL1_DMSO_200M_050219_2,8322 HBL1_DMSO_200M_050219_2,8322,VPLRQPRAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8323 45.189 800.0 132260.0 25 0 7586.8 14240 IDVFEDYIYG 10 119 617.2848217964095 1232.5550906596188 2 617.2848388552666 MULTI CID FTMS 0 0 0 8308 102665.5 1.0 0 0.0 15 Unmodified _IDVFEDYIYG_ ENSG00000123384|ENST00000243077|LRP1;ENST00000556356.1_1_12:57602422-57606335:+|nuORF 10.073929032068715 0.6785112666868882 4 {NN|[MP]|[D{I|L}]|[EV]}V 3 7 15.379 0.0 0.0 1.2477 0.0 0.0 0.0 902.3531307809656 902.3531307809656 -0.0611722820850548 0.0 -0.0611722820850548 0.0 0 0.5 0.9208187539523752 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}V 1.2477 + + 168 1 1.795 84317.5 0.6100000143051147 3801 4520 8308 HBL1_DMSO_200M_050219_2,8323 HBL1_DMSO_200M_050219_2,8323,IDVFEDYIYG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8325 45.193 40.0 1149200.0 25 0 134760.0 + 31574 RQPDSGISSI 10 66 530.2748439334505 1058.5351349337009 2 530.2753173708916 MULTI CID FTMS 0 0 0 8324 1334351.625 0.5481940041982896 2 -0.1616630554199218 1 Unmodified _RQPDSGISSI_ ENSG00000163902|ENST00000296255|RPN1 55.23464941255904 0.0494277333541689 4 {[TV]|[{I|L}S]}[YG]YG{I|L}SS{I|L} 10 5 + 73.633 0.0 0.0 6.9561 6.9561 82.621 0.0 0.0 0.0 3.7371250542002334 16.53212513775344 3.7371250542002334 3.7371250542002334 0 1.274227503252014 1.3010299956639813 0.8494850021680094 0.0 {[TV]|[{I|L}S]}[YG]YG{I|L}SS{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[DP]SG{I|L}SS{I|L};{[TV]|[{I|L}S]}S{[QN]|[E{I|L}]|[KN]}[HS]SS{I|L};{[TV]|[{I|L}S]}[YG]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};{[CA]|SS}{I|L}{[QN]|[E{I|L}]|[KN]}[HS]SS{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[DP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SS{I|L};{[WT]|[RM]}{[QN]|[E{I|L}]|[KN]}[HS]SS{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[DP]S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}W[WP]SS{I|L};{[CA]|SS}{I|L}{[QN]|[E{I|L}]|[KN]}[VP]DS{I|L} 6.9561;6.6031;5.4907;4.5219;4.5086;4.499;4.2133;4.1688;4.0551;3.8941 -;+;-;-;-;-;-;-;-;- + 247 1 1.795 40567.2 1.0 3802 4521 8324 HBL1_DMSO_200M_050219_2,8325 HBL1_DMSO_200M_050219_2,8325,RQPDSGISSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8326 45.194 27.0 2074100.0 25 0 519370.0 + 35676 SVDSHFQEV 9 79 524.2400057541652 1046.4654585751302 2 524.2410766482353 MULTI CID FTMS 0 0 0 8324 2251213.0 1.0 0 0.0 2 Unmodified _SVDSHFQEV_ ENSG00000114026|ENST00000344629|OGG1;ENST00000432857.2_1_3:9792686-9793638:+|nuORF;nc|ENSG00000114026|O15527-2|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-8|OGG1 60.07390631473393 0.0260411565414776 4 [HS]D{M(Oxidation (M))|F}QEVSV 9 5 + 57.885 0.0 0.0 5.5315 5.5315 75.153 0.0 0.0 0.0 2.875240784723374 2.875240784723374 2.875240784723374 2.875240784723374 0 0.4247425010840047 0.0 0.805462187404089 0.0 [HS]D{M(Oxidation (M))|F}QEVSV;W[{M(Oxidation (M))|F}V]Q[HC]EV;[HS]D{M(Oxidation (M))|F}Q[VS]EV;[HS]D{M(Oxidation (M))|F}[AG]EVSV;[HS]D{M(Oxidation (M))|F}[VS]QEV;[HS]D[VS]{M(Oxidation (M))|F}QEV;{[{M(Oxidation (M))|F}H]|[RQ]}SDQEVSV;[HS]{M(Oxidation (M))|F}DQEVSV;{NN|[MP]|[D{I|L}]|[EV]}EEQEVSV;[R{M(Oxidation (M))|F}]EQ[HC]EV 5.5315;5.2568;4.9135;4.6516;4.5497;4.5241;4.382;4.382;4.2133;4.1531 -;-;-;-;-;-;-;-;-;- 1278 1 1.795 47381.5 1.0 3803 4521 8324 HBL1_DMSO_200M_050219_2,8326 HBL1_DMSO_200M_050219_2,8326,SVDSHFQEV True True SVDSHFQEV 45.194367 524.241076648235 50696304.0 8324.0 ENST00000432857.2_1_3:9792686-9793638:+|nuORF;;nc|ENSG00000114026|O15527-5|OGG1;;nc|ENSG00000114026|O15527-3|OGG1;;nc|ENSG00000114026|O15527-6|OGG1;;nc|ENSG00000114026|O15527-2|OGG1;;ENSG00000114026|ENST00000344629|OGG1;;nc|ENSG00000114026|O15527-4|OGG1;;nc|ENSG00000114026|O15527-7|OGG1;;nc|ENSG00000114026|O15527-8|OGG1 7.176772435506185 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8327 45.196 21.0 2697200.0 25 0 454960.0 + -1 AGGECWPLCGL 11 40 610.264962759992 1218.515372586784 2 610.2657348513603 MULTI CID FTMS 0 0 0 8324 2586233.5 1.0 0 0.0 3 2 Carbamidomethyl (C) _AGGEC(Carbamidomethyl (C))WPLC(Carbamidomethyl (C))GL_ REV__ENST00000225777.7_1_17:76168333-76168627:+|nuORF 8.745405648335112 0.8338865417133445 4 {[QG]|[NA]}YPY 5 -1 48.456 0.0 0.0 3.9766 0.0 0.0 0.0 607.2324312799436 607.2324312799436 41.46591250700361 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[QG]|[NA]}YPY 3.9766 - 19 + 1 1.795 45670.1 1.0 3804 4521 8324 HBL1_DMSO_200M_050219_2,8327 HBL1_DMSO_200M_050219_2,8327,AGGECWPLCGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8328 45.197 66.0 1007000.0 25 0 195850.0 + + 17178 SVVGPVKGV 9 78 421.2602850785381 840.5060172238763 2 421.2606384158134 MULTI CID FTMS 0 0 0 8324 839076.6875 0.6266071326055634 1 -0.0809707641601562 4 Unmodified _KLKEGVAP_ nc|ENSG00000170322|Q6P4R8-3|NFRKB;ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB 21.74664581756881 0.5868176546531598 4 [VS]VG[VP][KG]V 9 -1 + 44.592 0.0 0.0 5.3054 5.3054 86.685 0.0 0.0 0.0 13.657528230408587 0.894135456510142 0.894135456510142 22.530485428495705 0 0.75 2.0 0.0 0.3252574989159953 [VS]VG[VP][KG]V;[VG]PVK[VG][VS];[VG]PKV[VG][VS];[PG]VVK[VG][VS];{[QV]|[N{I|L}]|[RA]|[KV]}PRR[VS];[PG]VKV[VG][VS];[KP]VR[WR];[KP]VGV[VG][VS];{[QV]|[N{I|L}]|[RA]|[KV]}PGV[VG][VS] 5.3054;2.6248;2.4153;1.4548;1.3699;1.2453;1.0558;0.54257;0.46292 -;-;-;-;-;-;-;-;- 221 + 1 1.795 58924.0 1.0 3805 4521 8324 HBL1_DMSO_200M_050219_2,8328 HBL1_DMSO_200M_050219_2,8328,KLKEGVAP False False SVVGPVKGV 45.197133 421.260638415813 19800454.0 8324.0 nc|ENSG00000170322|Q6P4R8-3|NFRKB;;ENSG00000170322|ENST00000682444|NFRKB;;nc|ENSG00000170322|Q6P4R8-2|NFRKB 5.266668955485026 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8329 45.199 64.0 895280.0 25 0 80896.0 -1 KAFVYPSVC 9 75 535.7728684245202 1069.5311839158403 2 535.7731811404228 MULTI CID FTMS 0 0 0 8324 662995.5625 0.4218523610250031 -2 0.2076530456542968 5 Carbamidomethyl (C) _KAFVYPSVC(Carbamidomethyl (C))_ ENSG00000188868|ENST00000293725|ZNF563;ENSG00000188868|ENST00000293725|ZNF563 10.823927491677226 0.5436922275383211 4 KA{M(Oxidation (M))|F} 3 -1 20.445 0.0 0.0 1.9116 0.0 0.0 97.97609186727456 622.3304537408811 720.3065456081557 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 KA{M(Oxidation (M))|F} 1.9116 + + 81 + 1 1.795 50019.4 1.0 3806 4521 8324 HBL1_DMSO_200M_050219_2,8329 HBL1_DMSO_200M_050219_2,8329,KAFVYPSVC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8330 45.201 84.0 881060.0 25 0 80595.0 + 19226 LEGVTVYSYLY 11 70 653.8345719498211 1305.654590966442 2 653.8353149294853 MULTI CID FTMS 0 0 0 8324 589005.3125 1.0 0 0.0 6 Unmodified _LEGVTVYSYLY_ REV__ENSG00000139514|ENST00000380752|SLC7A1;REV__ENSG00000165349|ENST00000374299|SLC7A3 13.042465956692816 0.7638483625850725 4 [VP]TSPV 6 -1 36.353 0.0 0.0 2.7842 0.0 0.0 0.0 722.3091020838862 722.3091020838862 24.7587902335121 0.0 0.0 0.0 0 0.0 1.154901959985743 1.0189301784845295 0.0 [VP]TSPV 2.7842 - 256 1 1.795 60862.4 1.0 3807 4521 8324 HBL1_DMSO_200M_050219_2,8330 HBL1_DMSO_200M_050219_2,8330,LEGVTVYSYLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8331 45.203 86.0 1277000.0 25 0 143220.0 45479 YTLFRGKV 8 102 328.52722979785483 982.5598599937646 3 328.5270873904228 MULTI CID FTMS 0 0 0 8324 502134.03125 0.8734291413728463 1 -0.0809707641601562 7 Unmodified _YTLFRGKV_ ENSG00000110536|ENST00000326674|PTPMT1;nc|ENSG00000110536|Q8WUK0-2|PTPMT1;nc|ENSG00000110536|Q8WUK0-3|PTPMT1 13.50788311687929 0.7113601687236069 4 {I|L}YTVG 5 6 45.573 0.0 0.0 4.6382 0.0 0.0 0.0 446.2533053033813 446.2533053033813 32.808984056553534 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {I|L}YTVG 4.6382 - 45 + 1 1.795 92938.7 1.0 3808 4521 8324 HBL1_DMSO_200M_050219_2,8331 HBL1_DMSO_200M_050219_2,8331,YTLFRGKV False True IYTVGKRF 45.202506 328.527087390423 3778099.5 8324.0 ENSG00000147604|ENST00000352983|RPL7 3.7501724561055503 3.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8332 45.205 116.0 366480.0 25 0 32533.0 + 16458 KAINQGGLTSV 11 91 544.3086822638671 1086.6028115945342 2 544.3091918826103 MULTI CID FTMS 0 0 0 8324 505657.875 0.1922993879715211 2 -0.1616630554199218 8 Unmodified _KAINQGGLTSV_ ENSG00000100902|ENST00000261479|PSMA6;ENST00000554843.5_1_14:35761682-35780127:+|nuORF;ENST00000556167.1_1_14:35761682-35777333:+|nuORF;nc|ENSG00000100902|P60900-2|PSMA6 63.960520009940105 0.0530716371881472 4 [VS][WP][KA]{I|L}TSV 10 7 + 64.403 0.0 0.0 5.927 5.927 75.29 0.0 0.0 0.0 11.505149978319906 57.391187112966655 11.505149978319906 1.875207208364636 0 1.424742501084005 1.3979400086720375 0.9247425010840048 0.805462187404089 [VS][WP][KA]{I|L}TSV;[VS]G[EP][KA]{I|L}TSV;[VS][WP]{I|L}[KA]TSV;[VS][WP]RRTSV;[VS]G[EP]{I|L}[KA]TSV;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}[KA]{I|L}TSV;{[QD]|[EN]|[WG]|[KD]|[RS]}[EP][KA]{I|L}TSV;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[KA]TSV;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}RRTSV;{[QD]|[EN]|[WG]|[KD]|[RS]}[EP]{I|L}[KA]TSV 5.927;5.7544;4.982;4.9349;4.8094;4.6405;4.5789;3.6955;3.6484;3.6339 -;-;-;-;-;-;-;-;-;- 217 1 1.795 41249.8 1.0 3809 4521 8324 HBL1_DMSO_200M_050219_2,8332 HBL1_DMSO_200M_050219_2,8332,KAINQGGLTSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8333 45.208 169.0 556970.0 25 0 45401.0 + -1 DAMWTSEAL 9 110 520.2244865716252 1038.4344202100503 2 520.2255737185478 MULTI CID FTMS 0 0 0 8324 439158.1875 0.9293947486419244 -2 0.2076530456542968 9 Oxidation (M) _DAM(Oxidation (M))WTSEAL_ REV__ENST00000375772.7_1_X:51639815-51639956:+|nuORF 26.88365393820708 0.1891292719743517 4 {[DA]|[EG]}VHPT 6 -1 49.398 0.0 0.0 4.7569 0.0 0.0 0.0 415.1271555673181 415.1271555673181 26.03408749299639 0.0 0.0 0.0 0 1.25 1.6989700043360187 0.3252574989159953 0.0 {[DA]|[EG]}VHPT 4.7569 - 212 1 1.795 74957.9 1.0 3810 4521 8324 HBL1_DMSO_200M_050219_2,8333 HBL1_DMSO_200M_050219_2,8333,DAMWTSEAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8334 45.211 122.0 748250.0 25 0 90614.0 + 3170 AVTSVAKVV 9 91 437.2732971396938 872.5320413461876 2 437.2736694216728 MULTI CID FTMS 0 0 0 8324 412303.8125 0.0940195333294795 -3 0.2987937927246094 10 Unmodified _AVTSVAKVV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 49.93300154707207 0.0405168250806675 4 {[VA]|[{I|L}G]}TSVAKVV 9 0 + 62.194 0.0 0.0 7.128 7.128 94.072 0.0 0.0 0.0 41.41441272380455 13.187587626244124 13.187587626244124 26.34286745032816 0 1.1382104921644451 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}TSVAKVV;{[VA]|[{I|L}G]}{[WT]|[RM]}AKVV;{[MG]|[TS]}VAKV[R{I|L}];{[WT]|[RM]}AKV[R{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V[R{I|L}] 7.128;4.1089;3.2579;2.9773;1.4285 +;-;-;-;- + 395 + 1 1.795 76005.3 1.0 3811 4521 8324 HBL1_DMSO_200M_050219_2,8334 HBL1_DMSO_200M_050219_2,8334,AVTSVAKVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8335 45.213 130.0 562550.0 25 0 35453.0 + 34022 SLKDITNVS 9 113 488.7686639141015 975.5227748950032 2 488.7693054080009 MULTI CID FTMS 0 0 0 8324 348725.125 0.1473142952372161 -3 0.2987937927246094 11 Unmodified _SLKDITNVS_ ENSG00000129810|ENST00000412997|SGO1;nc|ENSG00000129810|Q5FBB7-2|SGO1;nc|ENSG00000129810|Q5FBB7-3|SGO1;nc|ENSG00000129810|Q5FBB7-4|SGO1;nc|ENSG00000129810|Q5FBB7-5|SGO1;nc|ENSG00000129810|Q5FBB7|SGO1 47.74868867922204 0.0453060283459952 4 {[TV]|[{I|L}S]}EKS{I|L}NSV 9 5 + 54.814 0.0 0.0 5.6189 5.6189 77.313 0.0 0.0 0.0 4.433428283417037 9.577570906191896 4.433428283417037 3.633643341304669 0 1.048455006504028 1.154901959985743 1.0138793319624575 0.0 {[TV]|[{I|L}S]}EKS{I|L}NSV;{[TV]|[{I|L}S]}KES{I|L}NSV;{[QN]|[E{I|L}]|[KN]}SKS{I|L}NSV;{[TV]|[{I|L}S]}{[WT]|[RM]}G{I|L}NSV;{[TV]|[{I|L}S]}EKS{I|L}GGSV;{[QN]|[E{I|L}]|[KN]}KSS{I|L}NSV;{[TV]|[{I|L}S]}KES{I|L}GGSV;{[QN]|[E{I|L}]|[KN]}SKS{I|L}GGSV;[VS][{I|L}A]SS{I|L}NSV;[{I|L}T]DKS{I|L}NSV 5.6189;5.2464;5.1645;4.866;4.675;4.4684;4.3025;4.2205;4.1974;4.04 -;-;-;-;-;-;-;-;-;- 478 1 1.795 62366.0 1.0 3812 4521 8324 HBL1_DMSO_200M_050219_2,8335 HBL1_DMSO_200M_050219_2,8335,SLKDITNVS True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8336 45.219 332.0 363070.0 25 0 23162.0 + -1 EGEPCFSSV 9 151 506.2086818345664 1010.4028107359328 2 506.2093688845634 MULTI CID FTMS 0 0 0 8324 217881.375 0.5575981116435187 1 -0.0809707641601562 12 Carbamidomethyl (C) _EGEPC(Carbamidomethyl (C))FSSV_ REV__ENSG00000196663|ENST00000359520|TECPR2;REV__nc|ENSG00000196663|O15040-2|TECPR2 12.531546534597751 0.4974689918368763 4 {[DA]|[EG]}A{I|L}V{I|L}{I|L}SP 9 -1 38.236 0.0 0.0 3.7843 0.0 0.0 0.0 127.8866862554129 127.8866862554129 24.145845000778543 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0752574989159953 0.0 {[DA]|[EG]}A{I|L}V{I|L}{I|L}SP 3.7843 - 452 1 1.795 93516.3 1.0 3813 4521 8324 HBL1_DMSO_200M_050219_2,8336 HBL1_DMSO_200M_050219_2,8336,EGEPCFSSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8337 45.226 345.0 307430.0 25 0 15611.0 + 26217 NQIKKIENL 9 145 550.3265306500481 1098.638508366896 2 550.3267089724541 MULTI CID FTMS 0 0 0 8324 215369.203125 0.2519980303257005 -2 0.2076530456542968 13 Unmodified _NQIKKIENL_ ENSG00000115685|ENST00000234038|PPP1R7;nc|ENSG00000115685|Q15435-2|PPP1R7;nc|ENSG00000115685|Q15435-3|PPP1R7;nc|ENSG00000115685|Q15435-4|PPP1R7;nc|ENSG00000115685|Q15435-5|PPP1R7 92.65332237495696 0.0139087009896299 4 {[QN]|[E{I|L}]|[KN]}{I|L}K[K{I|L}]EN{I|L} 9 0 {[QN]|[E{I|L}]|[KN]} + + 51.251 17.717 7.3179 4.6649 4.6649 51.179 0.0 0.0 0.0 0.0 22.261584145730644 0.0 0.0 0 1.75 0.0 0.6549471895720984 1.1549471895720984 + + {[QN]|[E{I|L}]|[KN]}{I|L}K[K{I|L}]EN{I|L} 4.6649 + + 945 + 1 1.795 87104.1 1.0 3814 4521 8324 HBL1_DMSO_200M_050219_2,8337 HBL1_DMSO_200M_050219_2,8337,NQIKKIENL True True NQIKKIENL 45.225679 550.3284 6300804.5 8324.0 ENSG00000115685|ENST00000234038|PPP1R7;;nc|ENSG00000115685|Q15435-4|PPP1R7;;nc|ENSG00000115685|Q15435-3|PPP1R7;;nc|ENSG00000115685|Q15435-5|PPP1R7;;nc|ENSG00000115685|Q15435-2|PPP1R7 5.291274388631185 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8338 45.233 430.0 160570.0 25 0 7216.1 + 29641 QMYEHFQEA 9 118 591.7474351449812 1181.4803173567625 2 591.7480346560478 MULTI CID FTMS 0 0 0 8324 182420.984375 1.0 0 0.0 14 Unmodified _QMYEHFQEA_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 49.93300154707207 0.0405168250806675 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SMQ[WD]WA 9 6 + 36.505 0.0 0.0 3.0897 3.0897 62.468 0.0 0.0 0.0 17.99976696344672 7.019309113210504 7.019309113210504 0.5676571578941036 0 0.0 1.3010299956639813 0.3807196863200844 0.4247425010840047 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SMQ[WD]WA;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SM[YE]HWA;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SQM[WD]WA;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SMQDDKEA;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SQMDDKEA;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SQ{[QG]|[NA]}[C(Carbamidomethyl (C))S]WA;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SMQ[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SQM[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SMQY[MT]Y;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SQWW[WM] 3.0897;3.0417;2.984;2.8544;2.7487;2.6651;2.4878;2.382;2.233;2.2118 -;-;-;-;-;-;-;-;-;- 1238 + 1 1.795 55811.3 1.0 3815 4521 8324 HBL1_DMSO_200M_050219_2,8338 HBL1_DMSO_200M_050219_2,8338,QMYEHFQEA True True QMYEHFQEA 45.23335 591.748034656048 1304472.75 8324.0 chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;;nc|ENSG00000079263|Q13342-5|SP140;;nc|ENSG00000079263|Q13342-2|SP140;;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-6|SP140;;nc|ENSG00000079263|Q13342-4|SP140;;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;;ENSG00000079263|ENST00000392045|SP140;;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-3|SP140 7.031947294871013 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8339 45.237 203.0 300580.0 25 0 23966.0 31777 RSIQEAPAV 9 86 485.7690155005295 969.523478067859 2 485.7694885134697 MULTI CID FTMS 0 0 0 8324 171319.46875 0.8497486352959631 1 -0.0809707641601562 15 Unmodified _RSIQEAPAV_ nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1 14.838274106304384 0.4350285940865338 4 SGV 3 7 15.662 0.0 0.0 1.6154 0.0 0.0 708.3908314387559 0.0 708.3908314387559 0.0 3.672137691284407 0.0 0.0 0 0.0 0.0 0.0 0.0 SGV 1.6154 - 80 + 1 1.795 52028.7 1.0 3816 4521 8324 HBL1_DMSO_200M_050219_2,8339 HBL1_DMSO_200M_050219_2,8339,RSIQEAPAV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 8340 45.246 469.0 229860.0 25 0 17237.0 + -1 AQQNSGHFL 9 132 501.24724898938473 500.2399725227848 1 501.2440978884697 MULTI CID FTMS 0 0 0 8324 127224.9765625 0.4662501408645556 -2 0.2076530456542968 16 nc|ENSG00000137265|Q15306-2|IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000493114.1_1_6:406896-407595:+|nuORF 4 [QA][WP] 4 -1 + 14.705 0.0 0.0 2.9396 2.9396 68.702 0.0 0.0 0.0 2.230749808046326 2.4865124202832334 2.230749808046326 4.137471167825417 0 0.0 0.0 0.0 0.4247425010840047 [QA][WP];[AG]A[WP];[YR]Y;{M(Oxidation (M))|F}[HV]V 2.9396;2.1125;2.0905;0.23188 -;-;-;- 63 1 1.795 87425.6 1.0 3817 4521 8324 HBL1_DMSO_200M_050219_2,8340 HBL1_DMSO_200M_050219_2,8340, False False AQQNSGHFL 45.245506 501.24409788847 1991497.375 8324.0 nc|ENSG00000137265|Q15306-2|IRF4;;ENSG00000137265|ENST00000380956|IRF4;;ENST00000493114.1_1_6:406896-407595:+|nuORF 8.068847179412842 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8341 45.259 800.0 134150.0 25 0 7514.3 + 7928 ELRERMDSIQS 11 131 682.3323363688544 1362.650119804509 2 682.3339111208916 MULTI CID FTMS 0 0 0 8324 118867.515625 0.7692986230528052 -1 0.0863609313964843 17 Unmodified _ELRERMDSIQS_ REV__nc|ENSG00000002079|Q9H6N6|MYH16 33.4449034751529 0.3133739643825231 4 {I|L}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QS 11 -1 + 49.94 0.0 0.0 3.6649 3.6649 69.453 0.0 0.0 0.0 10.223802115312443 10.223802115312443 10.223802115312443 3.442428178462656 0 1.5629529932484498 0.8538719643217619 0.7742275032520141 0.805462187404089 {I|L}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QS;{I|L}NW{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QS;{I|L}N{M(Oxidation (M))|F}{[WN]|[YH]}[WR]{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}AT{[CT]|[{M(Oxidation (M))|F}G]}{I|L}WN{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}AT{[CT]|[{M(Oxidation (M))|F}G]}WN{I|L}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}TA{[CT]|[{M(Oxidation (M))|F}G]}{I|L}WN{I|L}QS;{I|L}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]Q{I|L}S;{[QV]|[N{I|L}]|[RA]|[KV]}AT{[CT]|[{M(Oxidation (M))|F}G]}W{I|L}N{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}AT{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q[DG]{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}TA{[CT]|[{M(Oxidation (M))|F}G]}WN{I|L}{I|L}QS 3.6649;3.4123;3.2621;2.9146;2.6356;2.6156;2.5341;2.4728;2.4097;2.3365 -;-;-;-;-;-;-;-;-;- 2586 + 1 1.795 86665.6 0.6299999952316284 3818 4521 8324 HBL1_DMSO_200M_050219_2,8341 HBL1_DMSO_200M_050219_2,8341,ELRERMDSIQS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8342 45.27 514.0 214260.0 25 0 7649.8 + 42270 VSPYYATY 8 135 482.227027587423 962.439502241646 2 482.2284728884697 MULTI CID FTMS 0 0 0 8324 101962.96875 0.5312218820469141 -3 0.2987937927246094 18 Unmodified _VSPYYATY_ REV__nc|ENSG00000104413|Q6NXG1-2|ESRP1 8.593279151180031 0.7721714526254883 4 [DP]{M(Oxidation (M))|F} 3 -1 19.666 0.0 0.0 2.0433 0.0 0.0 0.0 600.2749727838499 600.2749727838499 3.634993639681319 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 [DP]{M(Oxidation (M))|F} 2.0433 - 285 + 1 1.795 88196.1 1.0 3819 4521 8324 HBL1_DMSO_200M_050219_2,8342 HBL1_DMSO_200M_050219_2,8342,VSPYYATY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8344 45.274 20.0 2326000.0 25 0 486790.0 + 3999 DALRPSVV 8 71 428.7475938389115 855.480634744623 2 428.7480346560478 MULTI CID FTMS 0 0 0 8343 2649559.0 0.7640982468019869 1 -0.0806922912597656 1 Unmodified _DALRPSVV_ ENSG00000089154|ENST00000300648|GCN1 39.94969957227396 0.2351327405675156 4 {[DA]|[EG]}{I|L}R[PS]VV 8 0 + 54.887 0.0 0.0 6.416 6.416 90.449 0.0 0.0 0.0 2.161903266879719 2.161903266879719 2.161903266879719 16.989700043360187 0 1.805462187404089 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}{I|L}R[PS]VV;W{I|L}[VG][PS]VV;[R{I|L}]{[DA]|[EG]}[PS]VV;{[SA]|[TG]}[R{I|L}][DP]VV;[R{I|L}]{[SA]|[TG]}[DP]VV;[PS]V[R{I|L}]{[DA]|[EG]}V 6.416;4.43;3.455;2.6646;2.4522;1.0686 +;-;-;-;-;- + 76 + 1 1.803 43107.9 1.0 3820 4522 8343 HBL1_DMSO_200M_050219_2,8344 HBL1_DMSO_200M_050219_2,8344,DALRPSVV False True DALRPSVV 45.274158 428.748034656048 55093768.0 8343.0 ENSG00000089154|ENST00000300648|GCN1 7.713895320892334 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8345 45.275 24.0 2198200.0 25 0 249050.0 33240 SFNPVWDEEP 10 61 407.1789569803616 1218.5150415412847 3 407.1793395876884 MULTI CID FTMS 0 0 0 8343 1818324.875 0.8221838170411689 1 -0.0806922912597656 2 Unmodified _SFNPVWDEEP_ ENSG00000149782|ENST00000279230|PLCB3;nc|ENSG00000149782|Q01970-2|PLCB3 5.40270961882225 0.7016457984575614 4 PY{I|L} 3 9 18.5 0.0 0.0 1.5182 0.0 0.0 348.1427744313783 494.1506746881469 842.2934491195252 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 PY{I|L} 1.5182 - 46 + 1 1.803 48230.8 1.0 3821 4522 8343 HBL1_DMSO_200M_050219_2,8345 HBL1_DMSO_200M_050219_2,8345,SFNPVWDEEP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8346 45.277 43.0 1373000.0 25 0 109530.0 + 43088 VYMNRVKEI 9 93 384.546727965605 1150.6183544970152 3 384.5472595095634 MULTI CID FTMS 0 0 0 8343 950511.625 0.6485195147489051 2 -0.185546875 3 Unmodified _VYMNRVKEI_ ENSG00000197223|ENST00000410067|C1D;ENST00000455013.2_1_10:81784495-81784867:-|nuORF 14.40537977576856 0.4467465336100671 4 [YV]PYM 5 7 23.952 0.0 0.0 2.0817 0.0 0.0 0.0 494.2851046197876 494.2851046197876 0.9936247538460918 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [YV]PYM 2.0817 - 90 + 1 1.803 57487.0 1.0 3822 4522 8343 HBL1_DMSO_200M_050219_2,8346 HBL1_DMSO_200M_050219_2,8346,VYMNRVKEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8347 45.278 68.0 640490.0 25 0 56655.0 + 18537 KYTEGVQSL 9 78 512.7685444857267 1023.5225360382534 2 512.7692138552666 MULTI CID FTMS 0 0 0 8343 802487.125 0.6798204863907709 1 -0.0806922912597656 4 Unmodified _KYTEGVQSL_ ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16552211-16552709:-|nuORF 60.07390631473393 0.0260411565414776 4 {[TV]|[{I|L}S]}{[SA]|[TG]}YGVQS{I|L} 10 4 + 57.743 0.0 0.0 5.6416 5.6416 85.492 0.0 0.0 0.0 10.0 10.660043594061918 10.0 10.0 0 1.1822333069283657 1.3010299956639813 1.1549471895720984 0.4247425010840047 {[TV]|[{I|L}S]}{[SA]|[TG]}YGVQS{I|L};[YK]{[ET]|[MV]}GVQS{I|L};{[TV]|[{I|L}S]}{[SA]|[TG]}YGV[AG]S{I|L};{[TV]|[{I|L}S]}EG[YK]QS{I|L};{[DA]|[EG]}T[YK]VQS{I|L};[YK]{[ET]|[MV]}GV[AG]S{I|L};{[DA]|[EG]}TV[YK]QS{I|L};{[SA]|[TG]}{[TV]|[{I|L}S]}YGVQS{I|L};{[DA]|[EG]}T[YK]V[AG]S{I|L};{[SA]|[TG]}E[YK]VQS{I|L} 5.6416;4.6645;4.3312;4.0439;3.9985;3.7649;3.657;3.5654;3.0988;2.9268 -;+;-;-;-;-;-;-;-;- + 326 1 1.803 37622.5 1.0 3823 4522 8343 HBL1_DMSO_200M_050219_2,8347 HBL1_DMSO_200M_050219_2,8347,KYTEGVQSL True True KYTEGVQSL 45.278158 512.769213855267 17197574.0 8343.0 ENST00000537175.1_1_12:16552211-16552709:-|nuORF;;ENSG00000092201|ENST00000216297|SUPT16H 5.74622376759847 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8348 45.28 66.0 1188700.0 25 0 130660.0 + 12946 HAFKISKI 8 110 315.1956329921905 942.5650695767716 3 315.1955444216728 MULTI CID FTMS 0 0 0 8343 763291.8125 0.0618045696763107 4 -0.3387298583984375 5 Unmodified _HAFKISKI_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4 23.1484247019978 0.5573009939494978 4 [HA]{M(Oxidation (M))|F}K{I|L} 5 3 33.288 0.0 0.0 3.5317 0.0 0.0 0.0 343.19791773140906 343.19791773140906 22.179250024847263 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 + [HA]{M(Oxidation (M))|F}K{I|L} 3.5317 + + 56 1 1.803 64838.6 1.0 3824 4522 8343 HBL1_DMSO_200M_050219_2,8348 HBL1_DMSO_200M_050219_2,8348,HAFKISKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8349 45.281 73.0 629700.0 25 0 99063.0 -1 ECKECRKCFY 10 62 711.7989531922636 1421.5833534513272 2 711.8007079958916 MULTI CID FTMS 0 0 0 8343 633758.125 0.5571117368312616 -2 0.1673316955566406 6 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFY_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 6.723162845929126 0.6955379296933136 4 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}Y 12 -1 + 76.024 0.0 0.0 5.3478 5.3478 74.925 0.0 0.0 0.0 7.447274948966935 59.03389089629101 7.447274948966935 3.0102999566398125 0 0.8935078169319297 0.0 0.0 0.8494850021680094 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHAEQQDA{M(Oxidation (M))|F}Y;[QA]DHEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEA[AG]QDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQ[AG]DA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQW{M(Oxidation (M))|F}Y;[QA]DHAEQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHAE[AG]QDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHAEQ[AG]DA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHAEQQW{M(Oxidation (M))|F}Y 5.3478;5.1361;4.7533;4.7078;4.7078;4.5839;4.5416;4.496;4.496;4.3722 -;-;-;-;-;-;-;-;-;- 496 1 1.803 41037.3 1.0 3825 4522 8343 HBL1_DMSO_200M_050219_2,8349 HBL1_DMSO_200M_050219_2,8349,ECKECRKCFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8350 45.283 71.0 1037500.0 25 0 89781.0 + 25641 NFQTAKESL 9 105 519.2657527286724 1036.5169525241447 2 519.2669555544853 MULTI CID FTMS 0 0 0 8343 536421.5 0.4871096820065863 -1 0.0809707641601562 7 Unmodified _NFQTAKESL_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 53.832793166522166 0.0319663582346103 4 {[DA]|[EG]}VHPKQ 7 8 41.378 0.0 0.0 3.9921 0.0 0.0 0.0 258.087300995101 258.087300995101 29.159963018955253 0.0 0.0 0.0 0 0.6989700043360187 1.154901959985743 1.079689690656103 0.5 {[DA]|[EG]}VHPKQ 3.9921 - 301 1 1.803 59706.8 1.0 3826 4522 8343 HBL1_DMSO_200M_050219_2,8350 HBL1_DMSO_200M_050219_2,8350,NFQTAKESL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8351 45.285 107.0 645910.0 25 0 62443.0 12298 GSDLRHHPHH 10 91 398.1945566574013 1191.561840572404 3 398.1948425173759 MULTI CID FTMS 0 0 0 8343 517442.71875 0.5871697504883516 1 -0.0806922912597656 8 Unmodified _GSDLRHHPHH_ ENST00000404970.3_1_17:8064789-8064941:-|nuORF;ENST00000498285.1_2_17:8054153-8064944:-|nuORF 19.256988751693697 0.5244284437930726 4 [SG]DAVVHPA 9 5 37.343 0.0 0.0 3.134 0.0 0.0 0.0 355.12500841355774 355.12500841355774 15.56706569622894 0.0 0.0 0.0 0 0.5138793319624578 0.9208187539523752 1.1445990182825423 0.0 [SG]DAVVHPA 3.134 - 254 1 1.803 65458.9 1.0 3827 4522 8343 HBL1_DMSO_200M_050219_2,8351 HBL1_DMSO_200M_050219_2,8351,GSDLRHHPHH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8352 45.289 200.0 340810.0 25 0 20275.0 + 2194 AQAPDLQRV 9 113 499.274682655908 0 499.2749206423759 PEAK CID FTMS 0 0 0 8343 277795.53125 0.835587976385913 -3 0.2886238098144531 9 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 13.042465956692816 0.2773713495150148 4 A 1 8 15.485 0.0 0.0 1.5538 0.0 0.0 199.09476218505972 723.3799663006628 922.4747284857226 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + A 1.5538 + + 9 + 1 1.803 54211.0 1.0 3828 4522 8343 HBL1_DMSO_200M_050219_2,8352 HBL1_DMSO_200M_050219_2,8352,AQAPDLQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8353 45.292 111.0 534960.0 25 0 62347.0 + 42744 VVDPNQVNV 9 98 492.2610115132087 982.5074700932174 2 492.2611266970634 MULTI CID FTMS 0 0 0 8343 259007.6875 1.0 0 0.0 10 Unmodified _VVDPNQVNV_ ENSG00000130589|ENST00000467148|HELZ2;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2 21.74664581756881 0.2544899275067181 4 VVD[RP]TVV 8 3 27.005 0.0 0.0 2.7486 0.0 0.0 0.0 113.98460536221084 113.98460536221084 6.32576888900239 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 VVD[RP]TVV 2.7486 - 386 1 1.803 52402.0 1.0 3829 4522 8343 HBL1_DMSO_200M_050219_2,8353 HBL1_DMSO_200M_050219_2,8353,VVDPNQVNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8354 45.296 208.0 440390.0 25 0 27374.0 + + 26476 SQPDKLQTL 9 125 515.2818399992659 1028.5491270653315 2 515.2828246951103 MULTI CID FTMS 0 0 0 8343 273288.5 0.0885953919218382 -3 0.2886238098144531 11 Unmodified _NTLQGISSPL_ ENSG00000085840|ENST00000371568|ORC1 37.97399986684836 0.1789611706409123 4 [DP]K{I|L}QT{I|L}{[QS]|[NT]} 9 -1 + 49.308 0.0 0.0 4.7939 4.7939 80.027 0.0 0.0 0.0 13.8566032266867 5.64249273687259 5.64249273687259 9.208187539523742 0 0.0 1.0457574905606752 1.089136830878453 0.2887254899964357 [DP]K{I|L}QT{I|L}{[QS]|[NT]};[DP]K{I|L}[AG]T{I|L}{[QS]|[NT]};[PS][VG]{I|L}QT{I|L}{[QS]|[NT]};[PS]{I|L}[VG]QT{I|L}{[QS]|[NT]};[PS][VG]{I|L}[AG]T{I|L}{[QS]|[NT]};[PS]{I|L}[VG][AG]T{I|L}{[QS]|[NT]};[PS]{I|L}TV{[QG]|[NA]}{I|L}{[QS]|[NT]};{[DA]|[EG]}[{I|L}V]V{[QG]|[NA]}{I|L}{[QS]|[NT]};[{I|L}T]SPV{[QG]|[NA]}{I|L}{[QS]|[NT]} 4.7939;3.8987;3.4467;3.1628;2.275;1.9911;1.565;0.16489;0.15583 -;-;-;-;-;-;-;-;- 310 1 1.803 71722.6 1.0 3830 4522 8343 HBL1_DMSO_200M_050219_2,8354 HBL1_DMSO_200M_050219_2,8354,NTLQGISSPL False False SQPDKLQTL 45.295516 515.28282469511 22937078.0 8343.0 ENSG00000085840|ENST00000371568|ORC1 4.4287692705790205 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8355 45.3 263.0 416410.0 25 0 71141.0 34576 SPHCYEEVCGF 11 101 424.1664309927584 1269.4774635784752 3 424.5012695193291 MULTI CID FTMS 0 0 0 8343 192172.90625 0.2761850744000288 -3 0.2886238098144531 12 Unmodified _SPHCYEEVCGF_ ENST00000498417.5_1_22:38227952-38229926:-|nuORF;nc|ENSG00000100124|Q6NXT1-2|ANKRD54 10.073929032068715 0.8255972128077141 4 YYSPS{[CP]|[EA]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{M(Oxidation (M))|F} 10 8 + 58.682 0.0 0.0 4.6226 4.6226 74.289 0.0 0.0 0.0 32.359856381998775 0.3545753392086226 0.3545753392086226 4.3933269383026285 0 0.805462187404089 2.0 0.805462187404089 0.0 YYSPS{[CP]|[EA]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{M(Oxidation (M))|F};YYSPS{[CP]|[EA]}{[{M(Oxidation (M))|F}C]|[YS]}G{M(Oxidation (M))|F};YYSPS{[CP]|[EA]}[CG]{M(Oxidation (M))|F}{M(Oxidation (M))|F};YYSP[WC(Carbamidomethyl (C))]Y[MT];YY[RD]{[CP]|[EA]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{M(Oxidation (M))|F};YYCC[HK]C(Carbamidomethyl (C)){M(Oxidation (M))|F}{M(Oxidation (M))|F} 4.6226;4.2765;3.9006;3.6775;1.9337;1.5579 -;-;-;-;-;- 531 + 1 1.803 90496.4 1.0 3831 4522 8343 HBL1_DMSO_200M_050219_2,8355 HBL1_DMSO_200M_050219_2,8355,SPHCYEEVCGF False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 8356 45.307 380.0 330320.0 25 0 20441.0 + 38022 TPAGGAPLLS 10 142 442.2469028893132 882.4792528454263 2 442.2469360232353 MULTI CID FTMS 0 0 0 8343 189086.890625 0.6218407627039041 -2 0.1673316955566406 13 Unmodified _TPAGGAPLLS_ REV__ENSG00000126883|ENST00000359428|NUP214;REV__nc|ENSG00000126883|P35658-2|NUP214;REV__nc|ENSG00000126883|P35658-3|NUP214;REV__nc|ENSG00000126883|P35658-4|NUP214;REV__nc|ENSG00000126883|P35658-5|NUP214 43.85829265575387 0.1168243637355526 4 [TP]NA{I|L}PAS{I|L} 9 -1 + 70.957 0.0 0.0 8.0406 8.0406 91.935 0.0 0.0 0.0 12.21848749616356 16.478174818886373 12.21848749616356 9.208187539523747 0 0.5752574989159953 1.0457574905606752 1.4604093769761874 0.0 [TP]NA{I|L}PAS{I|L};[TP]GGA{I|L}PAS{I|L};[TP]QG{I|L}PAS{I|L};[PA][SG]A{I|L}PAS{I|L};[TP]NA[PA]{I|L}S{I|L};[NP]TA{I|L}PAS{I|L};[PS]QA{I|L}PAS{I|L};[TP][AG]G{I|L}PAS{I|L};[TP]GGA[PA]{I|L}S{I|L};[PA]{[QS]|[NT]}{I|L}PAS{I|L} 8.0406;6.9972;6.8526;6.6561;6.6386;6.3578;6.3489;5.8091;5.5951;5.5198 -;-;-;-;-;-;-;-;-;- 1171 1 1.803 99355.5 1.0 3832 4522 8343 HBL1_DMSO_200M_050219_2,8356 HBL1_DMSO_200M_050219_2,8356,TPAGGAPLLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8357 45.321 800.0 290850.0 25 0 30249.0 -1 YYKTACCASCT 11 123 635.745934226955 1269.47731552071 2 635.7485839724541 MULTI CID FTMS 0 0 0 8343 161730.046875 0.2353951063979787 -2 0.1673316955566406 14 Carbamidomethyl (C) _YYKTAC(Carbamidomethyl (C))CASCT_ ENSG00000187720|ENST00000261862|THSD4;nc|ENSG00000187720|Q6ZMP0-4|THSD4 21.53697664764585 0.586507868110548 4 YYSPS 5 -1 81.498 0.0 0.0 6.4198 0.0 0.0 0.0 669.2138649067655 669.2138649067655 45.934406614145466 0.0 0.0 0.0 0 0.805462187404089 2.0 1.548455006504028 0.0 YYSPS 6.4198 - 551 + 1 1.803 171469.5 0.7200000286102295 3833 4522 8343 HBL1_DMSO_200M_050219_2,8357 HBL1_DMSO_200M_050219_2,8357,YYKTACCASCT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8358 45.328 416.0 519860.0 25 0 75651.0 + 38943 TVMGAELRHV 10 132 556.7967302801862 1111.5789076271724 2 556.7976562380791 MULTI CID FTMS 0 0 0 8343 132403.484375 0.0670015692326162 -2 0.1673316955566406 15 Unmodified _TVMGAELRHV_ ENSG00000160808|ENST00000292327|MYL3;ENSG00000168530|ENST00000352451|MYL1;ENSG00000198336|ENST00000393450|MYL4;nc|ENSG00000168530|P05976-2|MYL1 69.33821966488729 0.0189579340102328 4 TVMGAE{I|L}RHV 10 0 + 109.62 0.0 0.0 9.862 9.862 81.336 0.0 0.0 0.0 36.53212513775344 0.5999792967528634 0.5999792967528634 0.5999792967528634 0 1.4361818737241734 2.0 0.3494850021680094 0.91944517631652 + + TVMGAE{I|L}RHV;TVMGAE{I|L}RVH;TVMQE{I|L}RHV;TVMQE{I|L}RVH;TVVC(Carbamidomethyl (C))E{I|L}RHV;TVVC(Carbamidomethyl (C))E{I|L}RVH;TVV[CG]E{I|L}RHV;TVV[CG]E{I|L}RVH;TVMGAE[RH]{I|L}V;TVMGAE[RH]V{I|L} 9.862;9.808;9.0392;8.9852;8.7834;8.7295;7.955;7.9011;7.6359;7.5128 +;-;-;-;-;-;-;-;-;- + 1458 + 1 1.803 163955.7 1.0 3834 4522 8343 HBL1_DMSO_200M_050219_2,8358 HBL1_DMSO_200M_050219_2,8358,TVMGAELRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8359 45.342 800.0 226840.0 25 0 11398.0 + 1131 AGTDRSFAQI 10 182 533.2716759292318 1064.5287989252636 2 533.2717162966728 MULTI CID FTMS 0 0 0 8343 115352.5546875 0.4855472904523841 -2 0.1673316955566406 16 Unmodified _AGTDRSFAQI_ REV__ENSG00000154864|ENST00000674853|PIEZO2;REV__ENST00000579151.1_1_18:10677742-10681717:-|nuORF;REV__nc|ENSG00000154864|Q9H5I5-2|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5-3|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5|PIEZO2 29.081581746732265 0.3152867722954398 4 [AG]T[R{M(Oxidation (M))|F}]TATQ{I|L} 10 -1 + 36.513 0.0 0.0 3.4299 3.4299 64.128 0.0 0.0 0.0 1.4500392135118432 -0.9938288530678676 -0.9938288530678676 0.9813624419633272 0 1.066901560044258 1.6989700043360187 0.7742275032520141 0.0 [AG]T[R{M(Oxidation (M))|F}]TATQ{I|L};[AG]{I|L}[YQ]TATQ{I|L};[AG]{I|L}K[YG]QT{I|L}D;[{I|L}A]G[YQ]TATQ{I|L};[{I|L}A]GK[YG]QT{I|L}D;[AG]T[R{M(Oxidation (M))|F}]TAT[AG]{I|L};[AG]{I|L}[YQ]TAT[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}P]HQT{I|L}D;[Q{I|L}][YQ]TATQ{I|L};[QT][R{M(Oxidation (M))|F}]TATQ{I|L} 3.4299;3.3378;3.0682;2.9743;2.7047;2.569;2.4769;2.3744;2.3693;2.3515 -;-;-;-;-;-;-;-;-;- 1099 1 1.803 139442.5 0.6100000143051147 3835 4522 8343 HBL1_DMSO_200M_050219_2,8359 HBL1_DMSO_200M_050219_2,8359,AGTDRSFAQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8360 45.35 452.0 234110.0 25 0 12515.0 + 25281 MYINPSAKE 9 145 526.7567711251822 1051.4989893171644 2 526.7556030154228 MULTI CID FTMS 0 0 0 8343 101124.390625 1.0 0 0.0 17 Unmodified _MYINPSAKE_ ENSG00000179615|ENST00000641114|OR2AP1;ENSG00000179626|ENST00000641569|OR6C4 32.30548876998284 0.1201446275138228 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PE{[SA]|[TG]}KQV 9 5 + 40.855 0.0 0.0 3.8854 3.8854 64.859 0.0 0.0 0.0 17.671686609142128 1.8004946143061744 1.8004946143061744 0.6931499974349791 0 0.3252574989159953 2.0 0.2614393726401688 0.5891368308784531 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PE{[SA]|[TG]}KQV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{[TV]|[{I|L}S]}QQSV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}N{[RE]|[WV]}QV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[PS]QQSV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PE{[SA]|[TG]}KN{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{[TV]|[{I|L}S]}[QT]NV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}N{[RE]|[WV]}N{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PE{[SA]|[TG]}K[AG]V;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[PS][QT]NV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}GG{[RE]|[WV]}QV 3.8854;3.8195;3.5397;3.4415;3.3128;3.1158;2.9671;2.7818;2.7379;2.6589 -;-;-;-;-;-;-;-;-;- 1261 + 1 1.803 84692.5 1.0 3836 4522 8343 HBL1_DMSO_200M_050219_2,8360 HBL1_DMSO_200M_050219_2,8360,MYINPSAKE True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8362 45.355 48.0 1031300.0 25 0 129810.0 45655 YVQFLSGL 8 75 463.75379440067314 925.4930358681464 2 463.7545349001884 MULTI CID FTMS 0 0 0 8361 752933.3125 0.7044559145680328 1 -0.1048545837402343 1 Unmodified _YVQFLSGL_ ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3;nc|ENSG00000136205|Q68CZ2-3|TNS3;nc|ENSG00000136205|Q68CZ2-4|TNS3 19.438996006549623 0.6237395211498085 4 VYMATT{I|L}K 8 7 + 78.098 0.0 0.0 8.4385 8.4385 96.412 0.0 0.0 0.0 62.85580060704263 14.477437731477425 14.477437731477425 21.760912590556813 0 0.4247425010840047 2.0 0.4247425010840047 0.1747425010840047 VYMATT{I|L}K;VY{[TV]|[{I|L}S]}CT{I|L}K;VY{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AV 8.4385;6.0873;4.6903 -;-;- 103 + 1 1.803 42347.2 1.0 3837 4523 8361 HBL1_DMSO_200M_050219_2,8362 HBL1_DMSO_200M_050219_2,8362,YVQFLSGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8363 45.356 56.0 815570.0 25 0 102610.0 -1 CPNARCQFAFY 11 64 717.3065335155635 1432.598514097927 2 717.3080932497978 MULTI CID FTMS 0 0 0 8361 893664.75 1.0 0 0.0 2 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PNARC(Carbamidomethyl (C))QFAFY_ ENSG00000129353|ENST00000335757|SLC44A2;ENST00000589561.5_1_19:10746968-10754058:+|nuORF;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;nc|ENSG00000129353|Q8IWA5-3|SLC44A2 9.38312468134398 0.8308777417566128 4 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 67.468 0.0 0.0 4.7095 4.7095 77.985 0.0 0.0 0.0 7.447274948966935 11.382353118286233 7.447274948966935 7.447274948966935 0 0.8935078169319297 0.9208187539523752 0.3807196863200844 0.4247425010840047 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQGGA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQ[AG]NA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NMEA[AG]QNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}GGMEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]GGA{M(Oxidation (M))|F}Y 4.7095;4.1896;4.0744;4.0744;4.0744;3.5545;3.5545;3.5545;3.5545;3.4411 -;-;-;-;-;-;-;-;-;- 345 1 1.803 37028.5 1.0 3838 4523 8361 HBL1_DMSO_200M_050219_2,8363 HBL1_DMSO_200M_050219_2,8363,CPNARCQFAFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8364 45.358 46.0 1324600.0 25 0 163120.0 + 41516 VPNNKITVV 9 92 492.2974984222936 982.5804439113872 2 492.2979614138603 MULTI CID FTMS 0 0 0 8361 1274934.5 0.0256817122633474 -5 0.4604568481445312 3 Unmodified _VPNNKITVV_ ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 39.94969957227396 0.0757326808254658 4 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TVVV 9 3 + 60.702 0.0 0.0 6.1778 6.1778 83.096 0.0 0.0 0.0 13.62848963725991 14.09256854528806 13.62848963725991 6.505149978319906 0 1.2302046884880935 1.3979400086720375 1.110924374808178 0.0 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TVVV;[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VTVV;[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}S{I|L}VV;[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}TVV;VV[RD]PTVVV;[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VT{I|L}VV;[NP]NK{I|L}TVVV;VV[RD]PVTVV;VV[RD]TPVVV;VV[RD]PS{I|L}VV 6.1778;5.5157;5.4216;4.8219;4.7908;4.7278;4.5155;4.1287;4.1242;4.0346 -;-;-;-;-;-;-;-;-;- 436 1 1.803 52495.0 1.0 3839 4523 8361 HBL1_DMSO_200M_050219_2,8364 HBL1_DMSO_200M_050219_2,8364,VPNNKITVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8365 45.359 76.0 536890.0 25 0 133490.0 + 43072 VYKIKSSFK 9 76 367.22048085737725 1098.6396131723318 3 367.2205078005791 MULTI CID FTMS 0 0 0 8361 629955.25 1.0 0 0.0 4 Unmodified _VYKIKSSFK_ REV__ENSG00000106772|ENST00000376718|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-2|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-3|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-4|PRUNE2;REV__nc|ENSG00000106772|Q8WUY3-5|PRUNE2 13.90604991867851 0.4602628045680013 4 R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}K[KP][HS] 9 -1 + 29.912 0.0 0.0 2.7226 2.7226 78.869 0.0 0.0 0.0 14.427346590861138 6.834843577808204 6.834843577808204 29.91189665590142 0 0.0 0.0 1.1549471895720984 0.0 R{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}K[KP][HS] 2.7226 - 39 + 1 1.803 37799.5 1.0 3840 4523 8361 HBL1_DMSO_200M_050219_2,8365 HBL1_DMSO_200M_050219_2,8365,VYKIKSSFK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8366 45.366 374.0 375600.0 25 0 47789.0 -1 TVMGAELRHV 10 146 376.8652582320147 1127.573945296244 3 376.8658019900322 MULTI CID FTMS 0 0 0 8361 214132.125 0.4394979832639708 -2 0.1616630554199218 5 Oxidation (M) _TVM(Oxidation (M))GAELRHV_ ENSG00000160808|ENST00000292327|MYL3;ENSG00000168530|ENST00000352451|MYL1;ENSG00000198336|ENST00000393450|MYL4;nc|ENSG00000168530|P05976-2|MYL1 33.82136114134338 0.222812100547209 4 TV{M(Oxidation (M))|F}GAE{I|L}RHV 10 -1 + 93.639 0.0 0.0 8.3045 8.3045 89.196 0.0 0.0 0.0 36.53212513775344 8.45098040014257 8.45098040014257 6.53212513775344 0 0.6307196863200843 2.0 0.4247425010840047 0.0 TV{M(Oxidation (M))|F}GAE{I|L}RHV;TV{M(Oxidation (M))|F}QE{I|L}RHV;TV{M(Oxidation (M))|F}GAE{I|L}RVH;TV{M(Oxidation (M))|F}QE{I|L}RVH;TY[NP]E{I|L}RHV;TY[NP]E{I|L}RVH;TA[MT]AE{I|L}RHV;TA[MT]AE{I|L}RVH;[YQ][PS]E{I|L}RHV;TAHH[RD]RHV 8.3045;7.7252;7.555;6.9757;5.1957;4.4462;4.374;3.6246;2.0663;1.332 +;-;-;-;-;-;-;-;-;- + 286 + 1 1.803 116034.9 1.0 3841 4523 8361 HBL1_DMSO_200M_050219_2,8366 HBL1_DMSO_200M_050219_2,8366,TVMGAELRHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8367 45.38 800.0 156060.0 25 0 7220.2 + -1 VDQFATAEMC 10 159 594.2376631847578 1186.4607734363155 2 594.2390014529228 MULTI CID FTMS 0 0 0 8361 208844.390625 0.5944291847379374 -1 0.0806922912597656 6 Carbamidomethyl (C),Oxidation (M) _VDQFATAEM(Oxidation (M))C(Carbamidomethyl (C))_ REV__ENST00000382496.9_1_5:9041648-9041792:-|nuORF 18.1463463914782 0.5430639438673815 4 D{M(Oxidation (M))|F}NEQPV 7 -1 44.707 0.0 0.0 3.7681 0.0 0.0 339.0900766310105 0.0 339.0900766310105 0.0 24.371739432769523 0.0 0.0 0 1.2134679910804405 0.0 0.3054621874040891 1.305462187404089 D{M(Oxidation (M))|F}NEQPV 3.7681 - 1006 + 1 1.803 95229.5 0.8700000047683716 3842 4523 8361 HBL1_DMSO_200M_050219_2,8367 HBL1_DMSO_200M_050219_2,8367,VDQFATAEMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8368 45.394 800.0 249150.0 25 0 50030.0 5566 DMQTRSKQL 9 152 553.7842540677583 1105.5539552023165 2 553.7847778201103 MULTI CID FTMS 0 0 0 8361 213636.296875 0.8643687928538334 -1 0.0806922912597656 7 Unmodified _DMQTRSKQL_ ENSG00000248712|ENST00000503566|CCDC153;ENST00000375140.7_1_11:119061011-119064134:-|nuORF;nc|ENSG00000248712|Q494R4-2|DRC12 14.838274106304384 0.4350285940865338 4 DMDR 4 6 53.29 0.0 0.0 4.8202 0.0 0.0 0.0 585.3350924127561 585.3350924127561 23.11995814614532 0.0 0.0 0.0 0 0.5994850021680094 2.0 0.0 0.7742275032520141 DMDR 4.8202 - 277 + 1 1.803 151886.6 0.8799999952316284 3843 4523 8361 HBL1_DMSO_200M_050219_2,8368 HBL1_DMSO_200M_050219_2,8368,DMQTRSKQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8369 45.408 800.0 122870.0 25 0 7557.8 + -1 ASNDYTQQATQSY 13 124 759.8190045347956 1517.623456136391 2 759.8201171755791 MULTI CID FTMS 0 0 0 8361 182902.21875 1.0 0 0.0 8 2 Carbamidomethyl (C) _DWC(Carbamidomethyl (C))LHHIC(Carbamidomethyl (C))TNY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 5.731851221503515 0.8481046878870278 4 [DN]{[CP]|[EA]}YTQQA 9 -1 56.783 0.0 0.0 3.7416 0.0 0.0 0.0 494.1881268031268 494.1881268031268 19.26087761929769 0.0 0.0 0.0 0 0.6549471895720984 1.5228787452803376 1.9634679910804405 0.75 [DN]{[CP]|[EA]}YTQQA 3.7416 - 7650 1 1.803 71844.5 0.7400000095367432 3844 4523 8361 HBL1_DMSO_200M_050219_2,8369 HBL1_DMSO_200M_050219_2,8369,DWCLHHICTNY False False ASNDYTQQATQSY 45.407505 759.820117175579 1328162.75 8361.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 8.900604883829752 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8370 45.414 366.0 434500.0 25 0 36909.0 + 13030 HASQSVPMV 9 144 478.237337618149 954.460122303098 2 478.2359802126884 MULTI CID FTMS 0 0 0 8361 171866.09375 0.2234510363749195 -3 0.2480239868164062 9 Unmodified _HASQSVPMV_ ENSG00000047410|ENST00000367478|TPR 32.30548876998284 0.1201446275138228 4 V{M(Oxidation (M))|F}PMV 5 6 22.703 0.0 0.0 2.3786 0.0 0.0 363.1823313379693 0.0 363.1823313379693 0.0 3.351882730738975 0.0 0.0 0 0.5 0.0 0.0 0.0 V{M(Oxidation (M))|F}PMV 2.3786 - 556 + 1 1.803 123248.1 1.0 3845 4523 8361 HBL1_DMSO_200M_050219_2,8370 HBL1_DMSO_200M_050219_2,8370,HASQSVPMV True True HASQSVPMV 45.414093 478.235980212688 5630447.0 8361.0 ENSG00000047410|ENST00000367478|TPR 6.807422002156575 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8371 45.426 691.0 293450.0 25 0 34394.0 + 42583 VTQVTAPAL 9 160 450.26387446205166 0 450.2632324099541 PEAK CID FTMS 0 0 0 8361 146439.421875 1.0 0 0.0 10 Unmodified _VTQVTAPAL_ REV__ENSG00000198911|ENST00000361204|SREBF2;REV__nc|ENSG00000198911|Q12772-2|SREBF2 14.838274106304384 0.2567717476666951 4 {M(Oxidation (M))|F}T 2 -1 8.2011 0.0 0.0 0.91274 0.0 0.0 533.3198193813315 114.05649744205311 647.3763168233846 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {M(Oxidation (M))|F}T 0.91274 - 101 + 1 1.803 158241.0 1.0 3846 4523 8361 HBL1_DMSO_200M_050219_2,8371 HBL1_DMSO_200M_050219_2,8371,VTQVTAPAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8372 45.441 800.0 210220.0 25 0 25180.0 + 39186 TYQEKITHL 9 152 566.8029800605982 1131.5914071879963 2 566.8039428591728 MULTI CID FTMS 0 0 0 8361 122858.5546875 0.5789366167301356 -1 0.0806922912597656 11 Unmodified _TYQEKITHL_ ENSG00000112877|ENST00000264935|CEP72;nc|ENSG00000112877|Q9P209-2|CEP72 100.7086487251713 0.0106210784076588 4 TYQEK{I|L}TH{I|L} 9 0 + 110.23 0.0 0.0 9.7412 9.7412 89.314 0.0 0.0 0.0 36.47817481888637 5.404205291875968 5.404205291875968 5.404205291875968 0 2.294719919055794 2.0 1.0501648626366045 0.5 + + TYQEK{I|L}TH{I|L};TYQEK{I|L}T{I|L}H;TY[AG]EK{I|L}TH{I|L};TY[AG]EK{I|L}T{I|L}H;[YT]QV{[SA]|[TG]}{I|L}TH{I|L};[YT]QV{[TV]|[{I|L}S]}ATH{I|L};[YT]QV{[SA]|[TG]}{I|L}HT{I|L};TY{I|L}[TA]CKPVH;[YT][AG]V{[SA]|[TG]}{I|L}TH{I|L};[YT]QV{[TV]|[{I|L}S]}AHT{I|L} 9.7412;9.2636;8.9274;8.4498;5.5864;5.2577;4.8555;4.5859;4.5556;4.5268 +;-;-;-;-;-;-;-;-;- + 3281 + 1 1.803 130124.3 0.6100000143051147 3847 4523 8361 HBL1_DMSO_200M_050219_2,8372 HBL1_DMSO_200M_050219_2,8372,TYQEKITHL True True TYQEKITHL 45.441395 566.803942859173 1551609.375 8361.0 nc|ENSG00000112877|Q9P209-2|CEP72;;ENSG00000112877|ENST00000264935|CEP72 7.072339216868083 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8373 45.455 800.0 60121.0 25 0 16133.0 -1 0 33 1145.4906427810893 3433.450098943468 3 1146.164111316204 MULTI CID FTMS 0 0 0 8361 128617.8671875 1.0 0 0.0 12 4 E 1 -1 6.9897 0.0 0.0 0.20358 0.0 0.0 2777.224151218565 524.1641329400999 3301.388284158665 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20358 - 5 + 1 1.803 48908.1 0.4399999976158142 3848 4523 8361 HBL1_DMSO_200M_050219_2,8373 HBL1_DMSO_200M_050219_2,8373, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8375 45.46 7.4 6564100.0 25 0 593010.0 + 13026 HASQPSLTV 9 72 470.248038865904 938.481524798608 2 470.2484924197197 MULTI CID FTMS 0 0 0 8374 8369677.5 0.9723506605849618 -2 0.185546875 1 Unmodified _HASQPSLTV_ ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000175387|Q15796-2|SMAD2 49.93300154707207 0.0405168250806675 4 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TV 8 5 + 61.892 0.0 0.0 6.5949 6.5949 84.504 0.0 0.0 0.0 6.409780573583319 16.40978057358332 6.409780573583319 6.409780573583319 0 0.8807196863200843 1.3979400086720375 1.0 0.0 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TV;[{I|L}T]V{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TV;[HA]{[QS]|[NT]}[PS]{I|L}TV;[PS][Y{I|L}]{M(Oxidation (M))|F}{I|L}TV;{[TV]|[{I|L}S]}{I|L}{[YC]|[HE]}{[QN]|[E{I|L}]|[KN]}V;{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}T]V{[YC]|[HE]}{[QN]|[E{I|L}]|[KN]}V;[{I|L}T]V{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]};[PS][Y{I|L}]{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]} 6.5949;5.9119;5.4489;4.7631;2.096;1.878;1.413;1.195;0.046164 -;-;+;-;-;-;-;-;- + 157 1 1.802 42979.8 1.0 3849 4524 8374 HBL1_DMSO_200M_050219_2,8375 HBL1_DMSO_200M_050219_2,8375,HASQPSLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8376 45.461 13.0 3928200.0 25 0 777970.0 + 36322 SYLRRWNS 8 74 541.2828446597806 1080.5511363863611 2 541.2857543826103 MULTI CID FTMS 0 0 0 8374 1900724.625 0.4584693191709066 1 -0.0847091674804687 2 Unmodified _SYLRRWNS_ REV__ENSG00000064309|ENST00000531738|CDON;REV__ENST00000525625.1_1_11:125884983-125893371:-|nuORF;REV__nc|ENSG00000064309|Q4KMG0|CDON 23.1484247019978 0.5573009939494978 4 Y 1 -1 13.979 0.0 0.0 1.2937 0.0 0.0 899.4769766957346 0.0 899.4769766957346 0.0 3.521825181113625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2937 + + 45 + 1 1.802 47079.6 1.0 3850 4524 8374 HBL1_DMSO_200M_050219_2,8376 HBL1_DMSO_200M_050219_2,8376,SYLRRWNS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8377 45.462 5.8 11505000.0 25 0 1455700.0 + 38945 TVMGAELRHV 10 79 371.5338469840912 1111.5797115524736 3 371.5339538455009 MULTI CID FTMS 0 0 0 8374 7179066.5 1.0 0 0.0 3 Unmodified _TVMGAELRHV_ ENSG00000160808|ENST00000292327|MYL3;ENSG00000168530|ENST00000352451|MYL1;ENSG00000198336|ENST00000393450|MYL4;nc|ENSG00000168530|P05976-2|MYL1 34.93206674587334 0.2110832994570416 4 {[TV]|[{I|L}S]}MGAE{I|L}RHV 10 0 + 76.476 0.0 0.0 6.8799 6.8799 85.841 0.0 0.0 0.0 65.36683765109139 8.863781092484686 8.863781092484686 6.53212513775344 0 0.3807196863200844 2.0 0.0 0.805462187404089 + + {[TV]|[{I|L}S]}MGAE{I|L}RHV;{[TV]|[{I|L}S]}MQE{I|L}RHV;{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}E][QP]RHV 6.8799;6.2923;2.4648 +;-;- + 69 + 1 1.802 62643.9 1.0 3851 4524 8374 HBL1_DMSO_200M_050219_2,8377 HBL1_DMSO_200M_050219_2,8377,TVMGAELRHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8378 45.463 16.0 3237700.0 25 0 318690.0 + 24994 MPPPPPQGV 9 75 460.23852327962805 918.462493626056 2 460.2387573122978 MULTI CID FTMS 0 0 0 8374 3660041.25 0.1974979584013551 66 -5.1030120849609375 4 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 67.03532852164291 0.0222449892513529 4 {[RE]|[WV]}HPPQGV 8 4 + 38.51 0.0 0.0 4.1929 4.1929 83.182 0.0 0.0 0.0 15.62977812912628 6.01342204748164 6.01342204748164 38.51010335993443 0 1.3182503180159344 0.0 0.0 0.8494850021680094 {[RE]|[WV]}HPPQGV 4.1929 - 171 + 1 1.802 44097.9 1.0 3852 4524 8374 HBL1_DMSO_200M_050219_2,8378 HBL1_DMSO_200M_050219_2,8378,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8379 45.464 13.0 4203300.0 25 0 791290.0 + 36321 SYLPHSSEY 9 74 541.7426904916584 1081.4708280501168 2 541.7431518435478 MULTI CID FTMS 0 0 0 8374 2493963.0 0.7945309716765736 -1 0.1048545837402343 5 Unmodified _SYLPHSSEY_ ENSG00000119927|ENST00000348367|GPAM 15.847184025352805 0.4077185912009129 4 P{I|L}[MT] 4 8 17.435 0.0 0.0 1.6122 0.0 0.0 621.2384170802294 0.0 621.2384170802294 0.0 3.940162615404077 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L}[MT] 1.6122 - 62 1 1.802 45092.9 1.0 3853 4524 8374 HBL1_DMSO_200M_050219_2,8379 HBL1_DMSO_200M_050219_2,8379,SYLPHSSEY False True SYLPHSSEY 45.464417 541.743151843548 55545420.0 8374.0 ENSG00000119927|ENST00000348367|GPAM 7.968455632527669 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8380 45.466 51.0 1249100.0 25 0 134970.0 + 3662 DAEMTTRMV 9 84 527.2378385896784 1052.4611242461567 2 527.2383911013603 MULTI CID FTMS 0 0 0 8374 949774.875 0.0123279707405306 -4 0.3528785705566406 6 Unmodified _DAEMTTRMV_ ENSG00000205220|ENST00000358514|PSMB10 66.45667989310934 0.0225072657982126 4 {[DA]|[EG]}EMTTRMV 9 0 + 88.299 0.0 0.0 8.3897 8.3897 96.743 0.0 0.0 0.0 61.38743756437101 4.806810654858822 4.806810654858822 25.58636080345231 0 1.3494850021680094 2.0 0.8494850021680094 0.4247425010840047 + + {[DA]|[EG]}EMTTRMV;WE[W{M(Oxidation (M))|F}]RMV;{[DA]|[EG]}{M(Oxidation (M))|F}[DV]TRMV;{[DA]|[EG]}{M(Oxidation (M))|F}[WE]RMV;[{M(Oxidation (M))|F}T]RTTM[C(Carbamidomethyl (C))H];[{M(Oxidation (M))|F}T]RT[DV]EW;{[DA]|[EG]}{M(Oxidation (M))|F}{[ET]|[MV]}WWV;{[CT]|[{M(Oxidation (M))|F}G]}E[DV]TRMV;[{M(Oxidation (M))|F}T]R[WE]EW;[{M(Oxidation (M))|F}T]R[W{M(Oxidation (M))|F}][C(Carbamidomethyl (C))H] 8.3897;5.9586;5.7295;5.114;4.5966;3.1459;2.9786;2.736;2.5368;2.492 +;-;-;-;-;-;-;-;-;- + 208 + 1 1.802 53881.3 1.0 3854 4524 8374 HBL1_DMSO_200M_050219_2,8380 HBL1_DMSO_200M_050219_2,8380,DAEMTTRMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8381 45.467 60.0 1053100.0 25 0 102850.0 + 16483 KALCLHRDD 9 80 535.7728684245202 1069.5311839158403 2 535.7734252810478 MULTI CID FTMS 0 0 0 8374 813263.3125 0.5174650750594427 1 -0.0847091674804687 7 Unmodified _KALCLHRDD_ REV__ENSG00000116774|ENST00000320334|OLFML3;REV__ENST00000491700.1_1_1:114523533-114524388:+|nuORF;REV__nc|ENSG00000116774|Q9NRN5-2|OLFML3 6.723162845929126 0.6799819581413107 4 [KA]{[ES]|[DT]|[{I|L}C]}[{I|L}P]{M(Oxidation (M))|F}AK 9 -1 24.199 0.0 0.0 2.2625 0.0 0.0 0.0 94.95275882466936 94.95275882466936 10.553396606206888 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 [KA]{[ES]|[DT]|[{I|L}C]}[{I|L}P]{M(Oxidation (M))|F}AK 2.2625 - 96 1 1.802 54599.3 1.0 3855 4524 8374 HBL1_DMSO_200M_050219_2,8381 HBL1_DMSO_200M_050219_2,8381,KALCLHRDD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8382 45.469 94.0 1154000.0 25 0 126350.0 + 20327 LLFDLEVAL 9 82 344.86957800959794 1031.5869046289938 3 344.8694030642509 MULTI CID FTMS 0 0 0 8374 727573.9375 0.6421428512327173 -1 0.1048545837402343 8 Unmodified _LLFDLEVAL_ REV__ENSG00000132016|ENST00000586783|BRME1;REV__nc|ENSG00000132016|Q0VDD7-2|BRME1 16.149105407346934 0.3995459350917656 4 VA{I|L} 3 -1 26.159 0.0 0.0 2.5358 0.0 0.0 730.3865745966598 0.0 730.3865745966598 0.0 15.189549981487076 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 VA{I|L} 2.5358 + + 42 1 1.802 91304.1 1.0 3856 4524 8374 HBL1_DMSO_200M_050219_2,8382 HBL1_DMSO_200M_050219_2,8382,LLFDLEVAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8383 45.471 97.0 625960.0 25 0 101580.0 + 29247 QGYNLAYEFD 10 67 610.264962759992 1218.515372586784 2 610.2653076052666 MULTI CID FTMS 0 0 0 8374 699816.0 0.2705927365027172 3 -0.2602500915527344 9 Unmodified _QGYNLAYEFD_ REV__ENSG00000140025|ENST00000316738|EFCAB11;REV__ENST00000553871.5_1_14:90263589-90418750:-|nuORF;REV__ENST00000557685.5_1_14:90263589-90390924:-|nuORF;REV__nc|ENSG00000140025|Q9BUY7-2|EFCAB11;REV__nc|ENSG00000140025|Q9BUY7-6|EFCAB11 14.95716135407024 0.5965753712453801 4 {[QG]|[NA]}YPY 5 -1 45.942 0.0 0.0 3.7703 0.0 0.0 0.0 607.2351168268186 607.2351168268186 27.95371572735597 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 {[QG]|[NA]}YPY 3.7703 - 48 + 1 1.802 51205.0 1.0 3857 4524 8374 HBL1_DMSO_200M_050219_2,8383 HBL1_DMSO_200M_050219_2,8383,QGYNLAYEFD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8384 45.474 96.0 595890.0 25 0 49730.0 + 29323 QILQEQMSNL 10 76 602.3082280897272 1202.6019032462543 2 602.3057739138603 MULTI CID FTMS 0 0 0 8374 526928.1875 0.3082445297237289 4 -0.3373870849609375 10 Unmodified _QILQEQMSNL_ REV__ENSG00000102189|ENST00000322349|EEA1 9.38312468134398 0.6832340498775793 4 {I|L}EQS{I|L} 5 -1 21.771 0.0 0.0 1.8103 0.0 0.0 221.09422609957304 408.19013391666255 629.2843600162356 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 {I|L}EQS{I|L} 1.8103 - 105 + 1 1.802 47271.7 1.0 3858 4524 8374 HBL1_DMSO_200M_050219_2,8384 HBL1_DMSO_200M_050219_2,8384,QILQEQMSNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8385 45.477 169.0 439080.0 25 0 36739.0 + -1 YEKFCCLCQRQ 11 62 796.3410198594373 1590.6674867856746 2 796.3423339724541 MULTI CID FTMS 0 0 0 8374 397665.1875 0.8781702008111005 -1 0.1048545837402343 11 3 Carbamidomethyl (C) _YEKFC(Carbamidomethyl (C))C(Carbamidomethyl (C))LC(Carbamidomethyl (C))QRQ_ REV__ENSG00000115464|ENST00000398571|USP34 5.731851221503515 0.8481046878870278 4 {M(Oxidation (M))|F}ANQQAED[MT]Q 11 -1 78.391 0.0 0.0 4.9282 0.0 0.0 309.13248292178406 0.0 309.13248292178406 0.0 70.94390164293844 0.0 0.0 0 0.8807196863200843 0.0 0.0 1.1861818737241734 {M(Oxidation (M))|F}ANQQAED[MT]Q 4.9282 - 343 + 1 1.802 57373.1 1.0 3859 4524 8374 HBL1_DMSO_200M_050219_2,8385 HBL1_DMSO_200M_050219_2,8385,YEKFCCLCQRQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8386 45.482 265.0 321890.0 25 0 62330.0 -1 KEVEKMKNK 9 115 575.3194950054327 0 575.3207885622978 PEAK CID FTMS 0 0 0 8374 292838.09375 0.9016957519119668 -1 0.1048545837402343 12 Oxidation (M) _KEVEKM(Oxidation (M))KNK_ ENSG00000142945|ENST00000372224|KIF2C;ENST00000493027.5_1_1:45205556-45221765:+|nuORF;nc|ENSG00000142945|Q99661-2|KIF2C 11.494710602746466 0.2951255534130184 4 QKW{[MS]|[{M(Oxidation (M))|F}A]}VE 7 -1 26.969 0.0 0.0 2.3479 0.0 0.0 132.09429359851612 125.07248865299064 257.1667822515068 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.3494850021680094 0.0 QKW{[MS]|[{M(Oxidation (M))|F}A]}VE 2.3479 - 315 + 1 1.802 68885.5 1.0 3860 4524 8374 HBL1_DMSO_200M_050219_2,8386 HBL1_DMSO_200M_050219_2,8386,KEVEKMKNK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8387 45.496 800.0 306370.0 25 0 18237.0 + 39464 VAPVTHVSV 9 162 454.7637970492512 907.5130411653024 2 454.7637817263603 MULTI CID FTMS 0 0 0 8374 246789.90625 0.4250888580566289 2 -0.1531829833984375 13 Unmodified _VAPVTHVSV_ ENSG00000120690|ENST00000239882|ELF1 48.345845343767074 0.0439967357579942 4 {[VA]|[{I|L}G]}VPTHVSV 9 2 + 46.097 0.0 0.0 5.0795 5.0795 71.917 0.0 0.0 0.0 9.305030408736116 12.139560257667412 9.305030408736116 1.989700043360188 0 0.5796896906561032 2.0 1.066901560044258 0.0 {[VA]|[{I|L}G]}VPTHVSV;{[VA]|[{I|L}G]}PVTHVSV;{[VA]|[{I|L}G]}VPTVSHV;{[VA]|[{I|L}G]}PVTVSHV;{[VA]|[{I|L}G]}[{I|L}T][YR]SV;{[VA]|[{I|L}G]}V[{I|L}T]S[YR];{[VA]|[{I|L}G]}[YT][R{I|L}]SV;{[VA]|[{I|L}G]}[{I|L}T]VS[YR];{[VA]|[{I|L}G]}VPTVSVH;{[VA]|[{I|L}G]}PVTVSVH 5.0795;4.8602;3.7932;3.574;3.4197;3.157;3.1442;2.8252;2.8245;2.6052 -;+;-;-;-;-;-;-;-;- + 750 + 1 1.802 190092.9 0.9200000166893004 3861 4524 8374 HBL1_DMSO_200M_050219_2,8387 HBL1_DMSO_200M_050219_2,8387,VAPVTHVSV True True VAPVTHVSV 45.495605 454.76378172636 4643511.0 8374.0 ENSG00000120690|ENST00000239882|ELF1 4.535520235697429 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8388 45.502 328.0 226350.0 25 0 34306.0 + 35677 SVDSHFQEV 9 123 524.2400057541652 1046.4654585751302 2 524.2399780154228 MULTI CID FTMS 0 0 0 8374 224206.5625 0.0995936690575258 3 -0.2602500915527344 14 Unmodified _SVDSHFQEV_ ENSG00000114026|ENST00000344629|OGG1;ENST00000432857.2_1_3:9792686-9793638:+|nuORF;nc|ENSG00000114026|O15527-2|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-8|OGG1 38.17557092003332 0.0854718145212029 4 [HS]D{M(Oxidation (M))|F}QEVSV 9 5 + 50.117 0.0 0.0 4.7892 4.7892 82.71 0.0 0.0 0.0 1.1270428019128786 35.692672072328904 1.1270428019128786 12.460762528683702 0 0.3807196863200844 0.0 0.3494850021680094 0.3252574989159953 [HS]D{M(Oxidation (M))|F}QEVSV;[HS]D{M(Oxidation (M))|F}[AG]EVSV;[TP][C(Carbamidomethyl (C))Q]QEVSV;[HS]D{M(Oxidation (M))|F}Q[VS]EV;{NN|[MP]|[D{I|L}]|[EV]}P{[C(Carbamidomethyl (C))E]|[WC]}EVSV;[EP]V{[C(Carbamidomethyl (C))E]|[WC]}EVSV;[HS]D{M(Oxidation (M))|F}AADVSV;[VP]E{[C(Carbamidomethyl (C))E]|[WC]}EVSV;[HS]D{M(Oxidation (M))|F}QT[DV]V;[HS]D{M(Oxidation (M))|F}[VS]QEV 4.7892;3.5985;3.1462;2.9742;2.9511;2.8523;2.7909;2.7126;2.6866;2.6866 -;-;-;-;-;-;-;-;-;- 505 1 1.802 67254.3 1.0 3862 4524 8374 HBL1_DMSO_200M_050219_2,8388 HBL1_DMSO_200M_050219_2,8388,SVDSHFQEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8389 45.515 800.0 228750.0 25 0 19430.0 + -1 SYKCCEGEV 9 191 537.7142445968442 1073.4139362604883 2 537.7147094607353 MULTI CID FTMS 0 0 0 8374 206032.8125 1.0 0 0.0 15 Carbamidomethyl (C) _SYKC(Carbamidomethyl (C))CEGEV_ REV__ENSG00000080007|ENST00000370336|DDX43 10.823927491677226 0.5436922275383211 4 {[SA]|[TG]}[C(Carbamidomethyl (C))M]GYWTV 9 -1 {[SA]|[TG]}[C(Carbamidomethyl (C))M]GYW + + 18.201 -1.4402 -0.16839 1.6956 1.6956 44.409 0.0 0.0 0.0 0.0 -1.46468723916961 -1.46468723916961 0.0 0 0.0 0.0 0.3252574989159953 0.0 {[SA]|[TG]}[C(Carbamidomethyl (C))M]GYWTV 1.6956 - 656 + 1 1.802 142286.6 0.9200000166893004 3863 4524 8374 HBL1_DMSO_200M_050219_2,8389 HBL1_DMSO_200M_050219_2,8389,SYKCCEGEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8390 45.525 548.0 490720.0 25 0 42039.0 11434 GHGNGPGV 8 234 347.6664923342883 0 347.6665527224541 PEAK CID FTMS 0 0 0 8374 201929.359375 0.5911446492848618 -1 0.1048545837402343 16 Unmodified _GHGNGPGV_ ENSG00000262152|ENST00000573315|GREP1 2.577480529830294 0.5910327097116076 4 T 1 8 8.2488 0.0 0.0 1.1898 0.0 0.0 365.1485180350745 224.104303228186 589.2528212632604 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.2742275032520141 0.0 T 1.1898 - 18 + 1 1.802 214371.6 1.0 3864 4524 8374 HBL1_DMSO_200M_050219_2,8390 HBL1_DMSO_200M_050219_2,8390,GHGNGPGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8391 45.54 800.0 161760.0 25 0 10482.0 + 31575 RQPDSGISSI 10 170 530.2748439334505 1058.5351349337009 2 530.2749511599541 MULTI CID FTMS 0 0 0 8374 127973.234375 0.0525754669667655 5 -0.4039382934570312 17 Unmodified _RQPDSGISSI_ ENSG00000163902|ENST00000296255|RPN1 45.739877483867886 0.1051543674217965 4 E{I|L}SS{I|L} 5 6 55.157 0.0 0.0 5.2107 0.0 0.0 511.25822375320826 0.0 511.25822375320826 0.0 38.97174007442495 0.0 0.0 0 1.1203715150305282 0.0 1.25 0.0 E{I|L}SS{I|L} 5.2107 - 1516 1 1.802 102459.1 0.7300000190734863 3865 4524 8374 HBL1_DMSO_200M_050219_2,8391 HBL1_DMSO_200M_050219_2,8391,RQPDSGISSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8393 45.544 21.0 2259500.0 25 0 390720.0 + 3171 AVTSVAKVV 9 70 437.2732971396938 872.5320413461876 2 437.2736389040947 MULTI CID FTMS 0 0 0 8392 2825251.5 0.6442550845158922 1 -0.0684738159179687 1 Unmodified _AVTSVAKVV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 46.020951573049366 0.0490941689151868 4 {[VA]|[{I|L}G]}TSKV 6 3 43.906 0.0 0.0 5.032 0.0 0.0 0.0 284.1579393965241 284.1579393965241 20.7306842758112 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3807196863200844 0.0 {[VA]|[{I|L}G]}TSKV 5.032 - 268 1 1.802 44548.9 1.0 3866 4525 8392 HBL1_DMSO_200M_050219_2,8393 HBL1_DMSO_200M_050219_2,8393,AVTSVAKVV True True AVTSVAKVV 45.544415 437.273638904095 58437276.0 8392.0 nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27 5.685174783070882 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8394 45.546 46.0 985280.0 25 0 66817.0 + 34023 SLKDITNVS 9 80 488.7686639141015 975.5227748950032 2 488.7690307497978 MULTI CID FTMS 0 0 0 8392 1265443.125 0.5345696330947058 1 -0.0684738159179687 2 Unmodified _SLKDITNVS_ ENSG00000129810|ENST00000412997|SGO1;nc|ENSG00000129810|Q5FBB7-2|SGO1;nc|ENSG00000129810|Q5FBB7-3|SGO1;nc|ENSG00000129810|Q5FBB7-4|SGO1;nc|ENSG00000129810|Q5FBB7-5|SGO1;nc|ENSG00000129810|Q5FBB7|SGO1 39.94969957227396 0.0757326808254658 4 {[TV]|[{I|L}S]}KES{I|L}NSV 9 5 + 54.904 0.0 0.0 5.6282 5.6282 73.763 0.0 0.0 0.0 12.795088278393225 22.74690718274136 12.795088278393225 1.7609125905568137 0 1.1989700043360187 1.2218487496163564 0.805462187404089 0.0 {[TV]|[{I|L}S]}KES{I|L}NSV;{[TV]|[{I|L}S]}EKS{I|L}NSV;{[TV]|[{I|L}S]}{[WT]|[RM]}G{I|L}NSV;{[TV]|[{I|L}S]}KES{I|L}GGSV;{[TV]|[{I|L}S]}EKS{I|L}GGSV;{[TV]|[{I|L}S]}{[WT]|[RM]}G{I|L}GGSV 5.6282;5.4477;5.1209;4.6843;4.5038;4.177 -;-;-;-;-;- 297 1 1.802 39779.4 1.0 3867 4525 8392 HBL1_DMSO_200M_050219_2,8394 HBL1_DMSO_200M_050219_2,8394,SLKDITNVS True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8395 45.547 71.0 621320.0 25 0 51278.0 + 18242 KVIDPATATSV 11 85 551.3112169274885 1100.607880921777 2 551.3109619021416 MULTI CID FTMS 0 0 0 8392 997859.625 0.3997401023366453 -3 0.2702560424804687 3 Unmodified _KVIDPATATSV_ ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4 49.74193281347159 0.1190592179673825 4 V{I|L}DPATATW 9 3 64.663 0.0 0.0 5.8752 0.0 0.0 128.09532363105626 0.0 128.09532363105626 0.0 32.09137916201556 0.0 0.0 0 1.2302046884880935 0.0 1.0 0.0 V{I|L}DPATATW 5.8752 - 730 1 1.802 41567.1 1.0 3868 4525 8392 HBL1_DMSO_200M_050219_2,8395 HBL1_DMSO_200M_050219_2,8395,KVIDPATATSV True True KVIDPATATSV 45.547333 551.310961902142 93520080.0 8392.0 ENSG00000115484|ENST00000394440|CCT4;;nc|ENSG00000115484|P50991-2|CCT4 9.136531829833984 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8396 45.549 76.0 697580.0 25 0 106590.0 -1 YKCELCSFRC 10 66 711.7989531922636 1421.5833534513272 2 711.7999145388603 MULTI CID FTMS 0 0 0 8392 836435.625 0.7352775221482041 1 -0.0684738159179687 4 3 Carbamidomethyl (C) _YKC(Carbamidomethyl (C))ELC(Carbamidomethyl (C))SFRC(Carbamidomethyl (C))_ ENSG00000095574|ENST00000368886|IKZF5 9.38312468134398 0.6832340498775793 4 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}Y 12 -1 + 100.53 0.0 0.0 7.0718 7.0718 81.649 0.0 0.0 0.0 10.836134377877327 16.611814434466197 10.836134377877327 3.0102999566398125 0 1.0 0.0 0.3807196863200844 1.841129063296272 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQDQA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEA[AG]QDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQ[AG]DA{M(Oxidation (M))|F}Y;[QA]DHEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQW{M(Oxidation (M))|F}Y;[QA]HDEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQD[AG]A{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEA[AG]DQA{M(Oxidation (M))|F}Y;[QA]DHEAQDQA{M(Oxidation (M))|F}Y 7.0718;6.8601;6.4318;6.4318;6.3096;6.3079;6.2535;6.2201;6.2201;6.0978 -;-;-;-;-;-;-;-;-;- 1519 1 1.802 43482.7 1.0 3869 4525 8392 HBL1_DMSO_200M_050219_2,8396 HBL1_DMSO_200M_050219_2,8396,YKCELCSFRC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8397 45.551 91.0 841270.0 25 0 104550.0 + 25642 NFQTAKESL 9 101 519.2657527286724 1036.5169525241447 2 519.2666503787041 MULTI CID FTMS 0 0 0 8392 519368.59375 0.4716244045881277 2 -0.1755409240722656 5 Unmodified _NFQTAKESL_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 38.17557092003332 0.0854718145212029 4 {[DA]|[EG]}VHPKQ 7 8 34.357 0.0 0.0 3.3147 0.0 0.0 0.0 258.0885887852525 258.0885887852525 21.8828930537034 0.0 0.0 0.0 0 0.6307196863200843 1.154901959985743 0.3252574989159953 0.5 {[DA]|[EG]}VHPKQ 3.3147 - 175 1 1.802 66407.5 1.0 3870 4525 8392 HBL1_DMSO_200M_050219_2,8397 HBL1_DMSO_200M_050219_2,8397,NFQTAKESL True True NFQTAKESL 45.55111 519.266650378704 15632508.0 8392.0 nc|ENSG00000129003|Q709C8-3|VPS13C;;ENSG00000129003|ENST00000644861|VPS13C;;nc|ENSG00000129003|Q709C8-4|VPS13C;;nc|ENSG00000129003|Q709C8-2|VPS13C 6.433693726857503 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8398 45.553 78.0 801450.0 25 0 105800.0 -1 LPGRTICLCL 10 69 601.8237287449131 1201.632904556626 2 601.8240844607353 MULTI CID FTMS 0 0 0 8392 430976.3125 0.1223623571408392 -8 0.7828712463378906 6 2 Carbamidomethyl (C) _LPGRTIC(Carbamidomethyl (C))LC(Carbamidomethyl (C))L_ ENST00000294507.3_1_1:31206386-31206614:-|nuORF 5.731851221503515 0.7001233259664787 4 {I|L} 1 -1 11.783 0.0 0.0 0.98056 0.0 0.0 1070.5377335134604 0.0 1070.5377335134604 0.0 0.1889428044469987 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.98056 + + 11 + 1 1.802 51235.2 1.0 3871 4525 8392 HBL1_DMSO_200M_050219_2,8398 HBL1_DMSO_200M_050219_2,8398,LPGRTICLCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8399 45.555 84.0 457700.0 25 0 65619.0 + 13581 HPLPEVAHV 9 75 499.77565564612615 997.5367583590524 2 499.7747070193291 MULTI CID FTMS 0 0 0 8392 432600.6875 0.965342372711158 -4 0.351226806640625 7 Unmodified _HPLPEVAHV_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000567266.5_1_16:85833348-85838718:+|nuORF;ENST00000569997.1_1_16:85838427-85838718:+|nuORF 23.1484247019978 0.2366544122328345 4 [{I|L}P]N 3 7 24.538 0.0 0.0 2.4598 0.0 0.0 0.0 670.3337608827429 670.3337608827429 14.348331157524964 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}P]N 2.4598 - 103 1 1.802 38502.7 1.0 3872 4525 8392 HBL1_DMSO_200M_050219_2,8399 HBL1_DMSO_200M_050219_2,8399,HPLPEVAHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8400 45.558 173.0 387790.0 25 0 48128.0 + -1 SVAGSMCCLR 10 92 570.7535119511979 1139.4924709691957 2 570.7549926638603 MULTI CID FTMS 0 0 0 8392 302723.28125 0.1285857457500571 -3 0.2702560424804687 8 2 Carbamidomethyl (C) _SVAGSMC(Carbamidomethyl (C))C(Carbamidomethyl (C))LR_ REV__ENST00000555728.5_1_12:56082068-56082716:-|nuORF 18.1463463914782 0.5430639438673815 4 [VS]{I|L} 3 -1 37.447 0.0 0.0 3.2863 0.0 0.0 0.0 837.2838277409331 837.2838277409331 27.693365062317845 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 [VS]{I|L} 3.2863 - 101 1 1.802 58002.6 1.0 3873 4525 8392 HBL1_DMSO_200M_050219_2,8400 HBL1_DMSO_200M_050219_2,8400,SVAGSMCCLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8401 45.572 800.0 349980.0 25 0 18441.0 + -1 AGGECWPLCGL 11 225 407.1789569803616 1218.5150415412847 3 407.1792480349541 MULTI CID FTMS 0 0 0 8392 268556.3125 0.1214319053418608 4 -0.3192291259765625 9 2 Carbamidomethyl (C) _AGGEC(Carbamidomethyl (C))WPLC(Carbamidomethyl (C))GL_ REV__ENST00000225777.7_1_17:76168333-76168627:+|nuORF 13.51866281300042 0.753942941462391 4 {[QG]|[NA]}YPY{I|L} 6 -1 43.887 0.0 0.0 3.6017 0.0 0.0 0.0 494.1504610651001 494.1504610651001 30.07515625508539 0.0 0.0 0.0 0 0.6747425010840047 1.5228787452803376 0.0 0.0 {[QG]|[NA]}YPY{I|L} 3.6017 - 534 + 1 1.802 218152.5 0.9100000262260436 3874 4525 8392 HBL1_DMSO_200M_050219_2,8401 HBL1_DMSO_200M_050219_2,8401,AGGECWPLCGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8402 45.576 225.0 398770.0 25 0 68020.0 + 43713 YCAEIAHNV 9 112 510.23419215037615 1018.4538313675524 2 510.2347289919853 MULTI CID FTMS 0 0 0 8392 251472.875 0.4263137261550067 -2 0.1895637512207031 10 Unmodified _YCAEIAHNV_ ENSG00000144713|ENST00000429711|RPL32;ENST00000458542.1_1_3:25791186-25791384:+|nuORF 56.17704186161178 0.0281986971544335 4 YCAE{I|L}AHNV 9 0 + 91.751 0.0 0.0 9.0089 9.0089 97.105 0.0 0.0 0.0 69.64300477256421 19.530720181250643 19.530720181250643 21.53772288515836 0 0.8494850021680094 2.0 0.3494850021680094 1.2329535345634597 + + YCAE{I|L}AHNV;YCAE{I|L}AHGGV;YC{[QN]|[E{I|L}]|[KN]}AAHNV;YC{[QN]|[E{I|L}]|[KN]}AAHGGV;YCA[TA]{[MG]|[TS]}[R{M(Oxidation (M))|F}];YCA{[MG]|[TS]}[TA][R{M(Oxidation (M))|F}];YC{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[TA][R{M(Oxidation (M))|F}];YV[MD]AAHNV;YV[MD]AAHGGV;Y[YG]A[W{M(Oxidation (M))|F}]NV 9.0089;6.8941;6.6794;5.301;5.2119;5.2119;3.4963;3.413;2.0347;0.97476 +;-;-;-;-;-;-;-;-;- + 867 + 1 1.802 70536.0 1.0 3875 4525 8392 HBL1_DMSO_200M_050219_2,8402 HBL1_DMSO_200M_050219_2,8402,YCAEIAHNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8403 45.59 800.0 260600.0 25 0 22726.0 -1 SVSKDSCVMCC 11 152 617.729457046581 1233.444361159962 2 617.7297851443291 MULTI CID FTMS 0 0 0 8392 185472.21875 0.144503491879226 -2 0.1895637512207031 11 Carbamidomethyl (C),Oxidation (M) _SVSKDSC(Carbamidomethyl (C))VM(Oxidation (M))CC_ ENST00000398505.7_1_21:43414104-43414143:-|nuORF 13.042465956692816 0.7638483625850725 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QDASSM 8 -1 66.759 0.0 0.0 5.4124 0.0 0.0 0.0 336.0664674434183 336.0664674434183 52.77971137818503 0.0 0.0 0.0 0 1.6936726795685342 0.8239087409443188 1.2614393726401687 1.329689690656103 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QDASSM 5.4124 - 1373 1 1.802 152019.3 0.8700000047683716 3876 4525 8392 HBL1_DMSO_200M_050219_2,8403 HBL1_DMSO_200M_050219_2,8403,SVSKDSCVMCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8404 45.595 253.0 378130.0 25 0 13979.0 23949 LVRKYQGV 8 126 481.7920284649753 961.5695039967508 2 481.7926818728447 MULTI CID FTMS 0 0 0 8392 139015.921875 0.9610556704647926 1 -0.0684738159179687 12 Unmodified _LVRKYQGV_ ENSG00000162923|ENST00000414423|WDR26;ENST00000479727.1_1_1:224585697-224586694:-|nuORF;ENST00000486652.5_1_1:224577539-224589708:-|nuORF;nc|ENSG00000162923|Q9H7D7-2|WDR26;nc|ENSG00000162923|Q9H7D7|WDR26 10.183394434864962 0.7604730176254005 4 AT{M(Oxidation (M))|F}K 4 7 19.686 0.0 0.0 2.0472 0.0 0.0 0.0 511.3004947145628 511.3004947145628 7.211309630365577 0.0 0.0 0.0 0 0.1549471895720985 0.7958800173440752 0.0 0.0 AT{M(Oxidation (M))|F}K 2.0472 - 446 + 1 1.802 75446.7 1.0 3877 4525 8392 HBL1_DMSO_200M_050219_2,8404 HBL1_DMSO_200M_050219_2,8404,LVRKYQGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8405 45.609 800.0 84409.0 25 0 4564.8 + 19227 LEGVTVYSYLY 11 118 653.8347656130791 0 653.8347656130791 PEAK CID FTMS 0 0 0 -1 0 13 Unmodified _LEGVTVYSYLY_ REV__ENSG00000139514|ENST00000380752|SLC7A1;REV__ENSG00000165349|ENST00000374299|SLC7A3 5.731851221503515 0.47618401536486 4 V 1 -1 6.9897 0.0 0.0 0.53534 0.0 0.0 725.3328291479166 478.2318883127515 1203.564717460668 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.53534 + + 16 + 1 1.802 53042.9 0.699999988079071 3878 4525 8392 HBL1_DMSO_200M_050219_2,8405 HBL1_DMSO_200M_050219_2,8405,LEGVTVYSYLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8407 45.613 19.0 2212400.0 25 0 283070.0 + 26491 NTTIEPNKI 9 71 515.2818399992659 1028.5491270653315 2 515.2826415896416 MULTI CID FTMS 0 0 0 8406 2824030.25 0.915501628491052 1 -0.1070671081542968 1 Unmodified _NTTIEPNKI_ REV__ENSG00000106299|ENST00000223023|WASL 34.10243960390752 0.1078313939113124 4 [DP]K{I|L}QT{I|L}{[QS]|[NT]} 9 -1 + 43.835 0.0 0.0 4.2618 4.2618 78.599 0.0 0.0 0.0 11.751736484954378 32.240918700215886 11.751736484954378 9.208187539523747 0 0.0 0.0 1.274227503252014 0.0 [DP]K{I|L}QT{I|L}{[QS]|[NT]};[DP]K{I|L}[AG]T{I|L}{[QS]|[NT]};[{I|L}T]QK[DP]{I|L}{[QS]|[NT]};[{I|L}T][AG]K[DP]{I|L}{[QS]|[NT]} 4.2618;3.3665;1.9112;1.016 -;-;-;- 73 1 1.802 41372.0 1.0 3879 4526 8406 HBL1_DMSO_200M_050219_2,8407 HBL1_DMSO_200M_050219_2,8407,NTTIEPNKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8408 45.614 52.0 1220100.0 25 0 208660.0 + 38944 TVMGAEIRHV 10 69 556.7967302801862 1111.5789076271724 2 556.7975952029228 MULTI CID FTMS 0 0 0 8406 1149380.125 0.5816332733485183 2 -0.1842041015625 2 Unmodified _TVMGAELRHV_ ENST00000548725.5_1_12:56552185-56553955:+|nuORF;ENSG00000092841|ENST00000550697|MYL6;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 28.49450938151212 0.328477364964909 4 {[TV]|[{I|L}S]}MGAE{I|L}R[HV] 10 0 + 71.7 0.0 0.0 6.4503 6.4503 83.211 0.0 0.0 0.0 61.52249673628745 7.269987279362624 7.269987279362624 5.7352282311924085 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + + {[TV]|[{I|L}S]}MGAE{I|L}R[HV];{[TV]|[{I|L}S]}VC(Carbamidomethyl (C))E{I|L}R[HV];{[TV]|[{I|L}S]}MQE{I|L}R[HV];{[TV]|[{I|L}S]}V[CG]E{I|L}R[HV] 6.4503;5.9343;5.8626;5.1059 +;-;-;- + 90 + 1 1.802 54763.3 1.0 3880 4526 8406 HBL1_DMSO_200M_050219_2,8408 HBL1_DMSO_200M_050219_2,8408,TVMGAELRHV False True TVMGAEIRHV 45.614252 556.797595202923 75459022.0 8406.0 ENST00000548725.5_1_12:56552185-56553955:+|nuORF;;ENSG00000092841|ENST00000550697|MYL6;;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;;nc|ENSG00000092841|P60660-2|MYL6 9.550254185994469 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8409 45.616 46.0 1150200.0 25 0 91977.0 -1 DAEMTTRMV 9 90 535.2354195684488 1068.4562862036976 2 535.2359496951103 MULTI CID FTMS 0 0 0 8406 1036282.9375 0.6370486741970752 -1 0.0684738159179687 3 Oxidation (M) _DAEM(Oxidation (M))TTRMV_ ENSG00000205220|ENST00000358514|PSMB10 38.17557092003332 0.0854718145212029 4 {[DA]|[EG]}E{M(Oxidation (M))|F}TT{[WT]|[RM]}V 9 -1 + 60.85 0.0 0.0 5.6951 5.6951 83.2 0.0 0.0 0.0 34.82447808893326 0.3867301246356902 0.3867301246356902 8.992887666437142 0 1.0 1.6989700043360187 0.6747425010840047 0.0 {[DA]|[EG]}E{M(Oxidation (M))|F}TT{[WT]|[RM]}V;{[DA]|[EG]}EMT{[RE]|[WV]}{[MS]|[{M(Oxidation (M))|F}A]};WE{M(Oxidation (M))|F}T[Q{I|L}]{M(Oxidation (M))|F}V;{[DA]|[EG]}EM{[MS]|[{M(Oxidation (M))|F}A]}{[WT]|[RM]}V;{[DA]|[EG]}E[WY]{[WT]|[RM]}V;{[DA]|[EG]}{M(Oxidation (M))|F}DDT{[WT]|[RM]}V;{[DA]|[EG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PS]{[WT]|[RM]}V;{[{M(Oxidation (M))|F}C]|[YS]}[DP]TT{[WT]|[RM]}V;{[{M(Oxidation (M))|F}C]|[YS]}E[PS]T{[WT]|[RM]}V;W{M(Oxidation (M))|F}DD[Q{I|L}]{M(Oxidation (M))|F}V 5.6951;4.8535;4.4084;4.1993;3.593;2.8407;2.1866;1.6959;1.6732;1.554 +;-;-;-;-;-;-;-;-;- + 222 + 1 1.802 48287.8 1.0 3881 4526 8406 HBL1_DMSO_200M_050219_2,8409 HBL1_DMSO_200M_050219_2,8409,DAEMTTRMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8410 45.617 53.0 1167100.0 25 0 243840.0 34577 SPHCYEEVCGF 11 72 424.1664309927584 1269.4774635784752 3 424.1670104861259 MULTI CID FTMS 0 0 0 8406 818549.375 0.7557364356204599 1 -0.1070671081542968 4 Unmodified _SPHCYEEVCGF_ ENST00000498417.5_1_22:38227952-38229926:-|nuORF;nc|ENSG00000100124|Q6NXT1-2|ANKRD54 6.2057823575117 0.8458686499021061 4 YYSPS 5 10 55.317 0.0 0.0 4.3575 0.0 0.0 0.0 669.2123930897723 669.2123930897723 38.64995468387386 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.805462187404089 0.0 YYSPS 4.3575 - 228 + 1 1.802 55190.4 1.0 3882 4526 8406 HBL1_DMSO_200M_050219_2,8410 HBL1_DMSO_200M_050219_2,8410,SPHCYEEVCGF False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 8411 45.619 105.0 648250.0 25 0 86954.0 45735 YYHDETAQDE 10 52 635.745934226955 1269.47731552071 2 635.7466918826103 MULTI CID FTMS 0 0 0 8406 682537.3125 0.9934204954550312 2 -0.1842041015625 5 Unmodified _YYHDETAQDE_ ENSG00000021300|ENST00000354190|PLEKHB1;ENST00000541760.1_1_11:73360074-73362936:+|nuORF;ENST00000544532.5_1_11:73360074-73362871:+|nuORF;nc|ENSG00000021300|Q9UF11-2|PLEKHB1;nc|ENSG00000021300|Q9UF11-3|PLEKHB1;nc|ENSG00000021300|Q9UF11-4|PLEKHB1 9.38312468134398 0.6832340498775793 4 YYSPS 5 8 74.508 0.0 0.0 5.8692 0.0 0.0 0.0 669.2138274769367 669.2138274769367 57.85280958067105 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.805462187404089 0.0 YYSPS 5.8692 - 132 + 1 1.802 56644.8 1.0 3883 4526 8406 HBL1_DMSO_200M_050219_2,8411 HBL1_DMSO_200M_050219_2,8411,YYHDETAQDE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8412 45.621 102.0 604450.0 25 0 51555.0 + 17767 KQFEKQVEL 9 110 383.5483886695845 0 383.5483276247978 PEAK CID FTMS 0 0 0 8406 496891.0625 1.0 0 0.0 6 Unmodified _KQFEKQVEL_ ENSG00000197102|ENST00000360184|DYNC1H1 27.628801355627647 0.1319135480000405 4 D 1 9 6.9897 0.0 0.0 0.91359 0.0 0.0 162.742982323145 484.2901705377563 647.0331528609013 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.91359 - 35 + 1 1.802 54989.0 1.0 3884 4526 8406 HBL1_DMSO_200M_050219_2,8412 HBL1_DMSO_200M_050219_2,8412,KQFEKQVEL False True KQFEKQVEL 45.621335 383.548327624798 3438241.75 8406.0 ENSG00000197102|ENST00000360184|DYNC1H1 6.554268836975098 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8413 45.624 154.0 342880.0 25 0 26717.0 + 13175 HFVPGTTAV 9 80 464.74782781172064 927.4811026902412 2 464.7481567263603 MULTI CID FTMS 0 0 0 8406 411150.5 0.8061848113686823 2 -0.1842041015625 7 Unmodified _HFVPGTTAV_ ENSG00000205220|ENST00000358514|PSMB10;ENST00000574576.2_1_16:67968465-67968768:-|nuORF 26.34127834903884 0.1960301806784604 4 AV 2 7 21.454 0.0 0.0 2.3131 0.0 0.0 739.3644014957085 0.0 739.3644014957085 0.0 10.996075289514094 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + AV 2.3131 + + 76 + 1 1.802 50057.9 1.0 3885 4526 8406 HBL1_DMSO_200M_050219_2,8413 HBL1_DMSO_200M_050219_2,8413,HFVPGTTAV False True HFVPGTTAV 45.624389 464.74815672636 5254313.0 8406.0 ENST00000574576.2_1_16:67968465-67968768:-|nuORF;;ENSG00000205220|ENST00000358514|PSMB10 6.229060649871826 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8414 45.628 176.0 720840.0 25 0 69839.0 + 18416 KVVEIVKKL 9 121 352.5775917186166 1054.7109457560498 3 352.5775024294853 MULTI CID FTMS 0 0 0 8406 380457.625 0.862089417466846 -1 0.0684738159179687 8 Unmodified _KVVEIVKKL_ ENSG00000175467|ENST00000312397|SART1 62.86856922530385 0.024493861581232 4 KVVE{I|L}VK{I|L}K 9 2 + 71.4 0.0 0.0 6.7696 6.7696 75.391 0.0 0.0 0.0 14.706968305617345 0.3218468337140052 0.3218468337140052 0.3218468337140052 0 1.2708865128625186 0.0 0.4247425010840047 0.0 KVVE{I|L}VK{I|L}K;KVVE{I|L}VKK{I|L};KV{I|L}D{I|L}VK{I|L}K;KV{I|L}D{I|L}VKK{I|L};K{I|L}VD{I|L}VK{I|L}K;K{I|L}VD{I|L}VKK{I|L};{I|L}KVD{I|L}VK{I|L}K;{I|L}KVD{I|L}VKK{I|L} 6.7696;6.7391;6.0187;5.9882;5.4249;5.3944;5.3752;5.3447 -;+;-;-;-;-;-;- + 247 + 1 1.802 109259.5 1.0 3886 4526 8406 HBL1_DMSO_200M_050219_2,8414 HBL1_DMSO_200M_050219_2,8414,KVVEIVKKL True True KVVEIVKKL 45.627795 352.577502429485 2970803.75 8406.0 ENSG00000175467|ENST00000312397|SART1 6.214653333028157 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8415 45.63 107.0 575300.0 25 0 57883.0 5827 DPRYSDPQI 9 88 545.7626422962849 1089.5107316593696 2 545.7618896365166 MULTI CID FTMS 0 0 0 8406 344396.09375 1.0 0 0.0 9 Unmodified _DPRYSDPQI_ ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7 24.020572477871973 0.2255576514309169 4 [{M(Oxidation (M))|F}V]QP{[{M(Oxidation (M))|F}D]|MM}PQ{I|L} 9 5 + 28.082 0.0 0.0 2.5775 2.5775 68.627 0.0 0.0 0.0 4.503187623076954 8.182955476022897 4.503187623076954 4.503187623076954 0 0.7742275032520141 0.0 0.4247425010840047 0.5 [{M(Oxidation (M))|F}V]QP{[{M(Oxidation (M))|F}D]|MM}PQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DP{[{M(Oxidation (M))|F}D]|MM}[QP]{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PD{[{M(Oxidation (M))|F}D]|MM}[QP]{I|L};[{M(Oxidation (M))|F}V]QP{[{M(Oxidation (M))|F}D]|MM}[Q{I|L}]P;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DP{[{M(Oxidation (M))|F}D]|MM}[Q{I|L}]P;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PD{[{M(Oxidation (M))|F}D]|MM}[Q{I|L}]P;[QP][C(Carbamidomethyl (C))H][NP]PQ{I|L};{[QN]|[E{I|L}]|[KN]}PCC{[VA]|[{I|L}G]}QD{I|L};{[QN]|[E{I|L}]|[KN]}PCC{[VA]|[{I|L}G]}DQ{I|L};{[QN]|[E{I|L}]|[KN]}PCC{[RE]|[WV]}Q{I|L} 2.5775;2.1642;1.9816;1.8264;1.6648;1.4822;1.2289;0.93728;0.77565;0.4524 -;-;-;-;-;-;-;-;-;- 99 + 1 1.802 53813.4 1.0 3887 4526 8406 HBL1_DMSO_200M_050219_2,8415 HBL1_DMSO_200M_050219_2,8415,DPRYSDPQI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8416 45.643 747.0 288190.0 25 0 22774.0 37535 TLHPVWSQQ 9 177 548.2824597880839 1094.5503666429677 2 548.2827026247978 MULTI CID FTMS 0 0 0 8406 248085.953125 0.210194193342584 22 -1.8521499633789065 10 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 18.721224879955976 0.3299216912490967 4 [VP]SHEPPH[VP] 10 9 + 44.925 0.0 0.0 4.1044 4.1044 68.969 0.0 0.0 0.0 0.6461417300667449 27.970123425716444 0.6461417300667449 2.512096224246143 0 2.1549471895720984 0.721246399047171 0.0 0.0 [VP]SHEPPH[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSEPPH[VP];[VP]HSEPPH[VP];[VS]PHEPPH[VP];[{I|L}T]HPPEHPAP;[{I|L}T]HPPEHAPP;[{I|L}T]HPPEHPPA;[{I|L}T]HHWH[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PESVPH[VP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVQQHPV 4.1044;3.8749;3.7811;3.5768;3.5374;3.4932;3.4557;3.4431;3.115;2.6602 -;-;-;-;-;-;-;-;-;- 3270 1 1.802 167208.4 1.0 3888 4526 8406 HBL1_DMSO_200M_050219_2,8416 HBL1_DMSO_200M_050219_2,8416,TLHPVWSQQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8417 45.65 382.0 311250.0 25 0 20895.0 + 4892 DGHSPAVTI 9 136 448.7266007523138 895.4386485714276 2 448.7273742556572 MULTI CID FTMS 0 0 0 8406 220623.765625 1.0 0 0.0 11 Unmodified _DGHSPAVTI_ ENSG00000197081|ENST00000356956|IGF2R 48.345845343767074 0.0439967357579942 4 SPAVT{I|L} 6 3 33.148 0.0 0.0 3.7019 0.0 0.0 309.1082936017594 0.0 309.1082936017594 0.0 15.243500300354135 0.0 0.0 0 0.8182503180159344 0.0 0.805462187404089 0.0 + SPAVT{I|L} 3.7019 + + 144 1 1.802 95983.2 1.0 3889 4526 8406 HBL1_DMSO_200M_050219_2,8417 HBL1_DMSO_200M_050219_2,8417,DGHSPAVTI True True DGHSPAVTI 45.649868 448.727374255657 1568882.375 8406.0 ENSG00000197081|ENST00000356956|IGF2R 4.370616753896077 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8418 45.654 201.0 661790.0 25 0 42927.0 + 2443 AQTPPGPSL 9 139 434.2317071666667 866.4488614001334 2 434.2322265505791 MULTI CID FTMS 0 0 0 8406 234070.5625 0.180160417584475 -3 0.2580375671386719 12 Unmodified _AQTPPGPSL_ ENSG00000167978|ENST00000301740|SRRM2;nc|ENSG00000167978|Q9UQ35-2|SRRM2 65.23502041540118 0.0231836506122253 4 [QA]TPPGPS{I|L} 9 0 [QA]T + + 28.208 13.587 4.5269 3.2555 3.2555 46.557 0.0 0.0 0.0 0.0 7.3258454440694365 0.0 0.0 0 0.8494850021680094 0.0 1.0563707585678626 0.0 + + [QA]TPPGPS{I|L} 3.2555 + + 467 + 1 1.802 108320.7 1.0 3890 4526 8406 HBL1_DMSO_200M_050219_2,8418 HBL1_DMSO_200M_050219_2,8418,AQTPPGPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8419 45.659 302.0 289170.0 25 0 23421.0 42381 VTDPLTTDV 9 127 480.7474753821373 0 480.7477905154228 PEAK CID FTMS 0 0 0 8406 177772.4375 1.0 0 0.0 13 Unmodified _VTDPLTTDV_ ENSG00000005889|ENST00000304543|ZFX;nc|ENSG00000005889|P17010-3|ZFX 12.531546534597751 0.2832320739326029 4 G 1 9 5.4846 0.0 0.0 0.57162 0.0 0.0 831.384982647284 68.05142389468983 899.4364065419738 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.57162 - 57 + 1 1.802 71813.5 1.0 3891 4526 8406 HBL1_DMSO_200M_050219_2,8419 HBL1_DMSO_200M_050219_2,8419,VTDPLTTDV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8420 45.673 800.0 204860.0 25 0 10999.0 -1 VSIMEPKDEV 10 175 581.7868459036408 0 581.7874023318291 PEAK CID FTMS 0 0 0 8406 150825.09375 0.5951348275979425 -7 0.6273536682128906 14 Oxidation (M) _VSIM(Oxidation (M))EPKDEV_ ENST00000488662.1_1_16:78859714-78859900:+|nuORF 13.042465956692816 0.351733747982019 4 EE{M(Oxidation (M))|F}K{I|L}{M(Oxidation (M))|F} 6 -1 15.355 0.0 0.0 1.3219 0.0 0.0 116.03826632365492 249.08811365299064 365.1263799766456 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EE{M(Oxidation (M))|F}K{I|L}{M(Oxidation (M))|F} 1.3219 - 279 + 1 1.802 123009.1 0.8500000238418579 3892 4526 8406 HBL1_DMSO_200M_050219_2,8420 HBL1_DMSO_200M_050219_2,8420,VSIMEPKDEV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8421 45.688 800.0 293390.0 25 0 17753.0 + -1 EYMCMIDE 8 180 553.6942133146847 1105.3738736961693 2 553.6949340701103 MULTI CID FTMS 0 0 0 8406 135684.109375 0.2726024433499194 -2 0.1531829833984375 15 Carbamidomethyl (C),Oxidation (M) _EYM(Oxidation (M))C(Carbamidomethyl (C))MIDE_ REV__ENSG00000140990|ENST00000268668|NDUFB10;REV__ENST00000565031.1_1_16:2009625-2011290:+|nuORF;REV__nc|ENSG00000140990|O96000-2|NDUFB10 4.75600775471527 0.7954636275367004 4 {NN|[MP]|[D{I|L}]|[EV]}KPV 5 -1 36.933 0.0 0.0 3.3412 0.0 0.0 0.0 550.0483875094709 550.0483875094709 15.047039656504111 0.0 0.0 0.0 0 0.2742275032520141 0.7958800173440752 0.25 1.2304764623983973 {NN|[MP]|[D{I|L}]|[EV]}KPV 3.3412 - 1299 1 1.802 173938.2 0.8399999737739563 3893 4526 8406 HBL1_DMSO_200M_050219_2,8421 HBL1_DMSO_200M_050219_2,8421,EYMCMIDE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8422 45.702 800.0 215290.0 25 0 35542.0 39746 VEKVKRGQ 8 154 472.2895465415244 942.5645401498488 2 473.2961303591728 MULTI CID FTMS 0 0 0 8406 132445.3125 0.4097979442081117 8 -0.5014762878417969 16 Unmodified _VEKVKRGQ_ ENSG00000184368|ENST00000379643|MAP7D2;nc|ENSG00000184368|Q96T17-4|MAP7D2;nc|ENSG00000184368|Q96T17-5|MAP7D2;nc|ENSG00000184368|Q96T17|MAP7D2 8.593279151180031 0.7721714526254883 4 GPP 3 8 21.037 0.0 0.0 2.2319 0.0 0.0 111.07099967595909 577.3469942682249 688.417993944184 0.0 0.0 0.0 0.0 0 0.4838855026932703 0.0 0.0 0.0 GPP 2.2319 - 166 + 1 1.802 137903.0 0.75 3894 4526 8406 HBL1_DMSO_200M_050219_2,8422 HBL1_DMSO_200M_050219_2,8422,VEKVKRGQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8423 45.716 800.0 104590.0 25 0 3332.1 -1 0 143 577.3188837232021 576.3116072566021 1 577.7830078005791 MULTI CID FTMS 0 0 0 -1 0 17 4 {[TV]|[{I|L}S]}SAS{I|L} 6 -1 + 56.558 0.0 0.0 9.8138 9.8138 84.084 0.0 0.0 0.0 13.167665302065934 2.04119982655925 2.04119982655925 2.04119982655925 0 1.2302046884880935 1.3979400086720375 1.089136830878453 0.0 {[TV]|[{I|L}S]}SAS{I|L};{[TV]|[{I|L}S]}SATV;{[TV]|[{I|L}S]}STG{I|L};{[TV]|[{I|L}S]}STAV;{[TV]|[{I|L}S]}ASS{I|L};{[MG]|[TS]}VAS{I|L};{[TV]|[{I|L}S]}{[ET]|[MV]}K;{[ET]|[MV]}KS{I|L};{[SA]|[TG]}{I|L}SS{I|L};{[DS]|[MA]|[CV]|TT}[VG]S{I|L} 9.8138;9.4597;8.1717;7.8175;5.9687;5.0286;3.4381;1.1748;0.99903;0.36476 -;-;-;-;-;-;-;-;-;- 226 + 1 1.802 68352.3 0.7099999785423279 3895 4526 8406 HBL1_DMSO_200M_050219_2,8423 HBL1_DMSO_200M_050219_2,8423, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8425 45.72 1.3 34042000.0 25 0 3841700.0 + 41517 VPNNKITVV 9 72 492.2974984222936 982.5804439113872 2 492.2981140017509 MULTI CID FTMS 0 0 0 8424 48723348.0 0.9814614035802992 -1 0.1070671081542968 1 Unmodified _VPNNKITVV_ ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 32.30548876998284 0.1201446275138228 4 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}T 7 5 25.283 0.0 0.0 2.5731 0.0 0.0 0.0 213.1249745112497 213.1249745112497 9.084938383626522 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.3494850021680094 0.0 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}T 2.5731 - 134 1 1.786 42379.1 1.0 3896 4527 8424 HBL1_DMSO_200M_050219_2,8425 HBL1_DMSO_200M_050219_2,8425,VPNNKITVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8426 45.721 8.1 5649900.0 25 0 508500.0 + 13027 HASQPSLTV 9 71 470.248038865904 938.481524798608 2 470.2484008669853 MULTI CID FTMS 0 0 0 8424 7608630.0 0.8839356602027447 1 -0.0771369934082031 2 Unmodified _HASQPSLTV_ ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000175387|Q15796-2|SMAD2 46.020951573049366 0.0490941689151868 4 [HA]{[QS]|[NT]}[PS]{I|L}TV 9 0 + 36.277 0.0 0.0 3.8655 3.8655 80.091 0.0 0.0 0.0 12.52120593621833 10.98735147977522 10.98735147977522 14.95735564629648 0 0.7429928190999391 1.0969100130080565 1.3494850021680094 0.0 + + [HA]{[QS]|[NT]}[PS]{I|L}TV;{[TV]|[{I|L}S]}[TP]A[HN]TV;[{I|L}T][PS]A[HN]TV 3.8655;2.2717;0.90797 +;-;- + 123 1 1.786 37680.0 1.0 3897 4527 8424 HBL1_DMSO_200M_050219_2,8426 HBL1_DMSO_200M_050219_2,8426,HASQPSLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8427 45.722 20.0 2327200.0 25 0 261880.0 + 3578 DAAELAQHV 9 77 477.2375074049112 952.4604618766224 2 477.2380859255791 MULTI CID FTMS 0 0 0 8424 2666996.75 0.6962316838404677 1 -0.0771369934082031 3 Unmodified _DAAELAQHV_ ENSG00000213015|ENST00000325333|ZNF580 47.74868867922204 0.0453060283459952 4 {[DA]|[EG]}AE{I|L}AQ[HV] 9 0 + 76.092 0.0 0.0 7.989 7.989 94.071 0.0 0.0 0.0 60.58570440836698 7.147642715192504 7.147642715192504 12.703037561203844 0 1.424742501084005 1.6989700043360187 0.4247425010840047 0.3494850021680094 + + {[DA]|[EG]}AE{I|L}AQ[HV];{[DA]|[EG]}AE{I|L}A[AG][HV] 7.989;6.6553 +;- + 147 + 1 1.786 43860.9 1.0 3898 4527 8424 HBL1_DMSO_200M_050219_2,8427 HBL1_DMSO_200M_050219_2,8427,DAAELAQHV True True DAAELAQHV 45.722309 477.238085925579 47492044.0 8424.0 ENSG00000213015|ENST00000325333|ZNF580 9.342642466227211 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8428 45.723 38.0 1398900.0 25 0 138030.0 + 16583 KDLIRLFNQ 9 80 573.8339787109896 1145.6534044887792 2 573.8345825076103 MULTI CID FTMS 0 0 0 8424 1250717.625 0.221427519935189 -3 0.2602500915527344 4 Unmodified _KDLIRLFNQ_ REV__ENSG00000153179|ENST00000542104|RASSF3 10.823927491677226 0.5436922275383211 4 [VP]VSKHVPV{[QG]|[NA]} 11 -1 + 58.25 0.0 0.0 5.0845 5.0845 75.937 0.0 0.0 0.0 13.94335884403212 23.299224983309863 13.94335884403212 4.259687322722812 0 0.5 0.958607314841775 0.8494850021680094 0.0 [VP]VSKHVPV{[QG]|[NA]};[VP]VSKPVHV{[QG]|[NA]};[VP][KS]VHVPV{[QG]|[NA]};[VP][KS]VPVHV{[QG]|[NA]};[{I|L}V][QA]VHVPV{[QG]|[NA]};[KS][VP]VHVPV{[QG]|[NA]};[{I|L}V][QA]VPVHV{[QG]|[NA]};[KS][VP]VPVHV{[QG]|[NA]};[VP]VAA[VG]{I|L}HV{[QG]|[NA]};[VP]VAA{[VA]|[{I|L}G]}VHV{[QG]|[NA]} 5.0845;4.7127;4.2361;3.8643;3.2495;2.9525;2.8776;2.5807;2.0186;1.9095 -;-;-;-;-;-;-;-;-;- 349 1 1.786 45290.9 1.0 3899 4527 8424 HBL1_DMSO_200M_050219_2,8428 HBL1_DMSO_200M_050219_2,8428,KDLIRLFNQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8429 45.726 102.0 886340.0 25 0 62857.0 19548 LFQMPVSL 8 134 467.758550442108 933.502547951016 2 467.7591735720634 MULTI CID FTMS 0 0 0 8424 539510.875 0.581502359745866 -5 0.4457969665527344 5 Unmodified _LFQMPVSL_ ENSG00000063169|ENST00000594866|BICRA;nc|ENSG00000063169|Q9NZM4-2|BICRA 26.88365393820708 0.4786498634179528 4 RTMEA{I|L}{I|L} 7 6 40.843 0.0 0.0 4.3752 0.0 0.0 101.04841811347812 0.0 101.04841811347812 0.0 12.15865705879763 0.0 0.0 0 0.0 0.0 1.0941876774005248 0.2302046884880938 RTMEA{I|L}{I|L} 4.3752 - 1203 1 1.786 77449.0 1.0 3900 4527 8424 HBL1_DMSO_200M_050219_2,8429 HBL1_DMSO_200M_050219_2,8429,LFQMPVSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8430 45.73 208.0 558240.0 25 0 31597.0 2946 AVHEGLGLAVQ 11 135 547.3026848616817 1092.5908167901632 2 547.3035766482353 MULTI CID FTMS 0 0 0 8424 455153.59375 0.990020413639944 -1 0.1070671081542968 6 Unmodified _AVHEGLGLAVQ_ ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B 45.69961567697781 0.1414455360291008 4 {[VA]|[{I|L}G]}[HA]D{I|L}VAGQ{I|L} 11 6 + 66.258 0.0 0.0 6.0643 6.0643 84.197 0.0 0.0 0.0 15.08842226728914 33.58946766084971 15.08842226728914 8.289835427075282 0 0.853165816373186 2.0 1.829689690656103 0.0 {[VA]|[{I|L}G]}[HA]D{I|L}VAGQ{I|L};{[VA]|[{I|L}G]}[HA]D{I|L}VAV[QA];{[VA]|[{I|L}G]}[HA]D{I|L}VQQ{I|L};{[VA]|[{I|L}G]}[HA]D{I|L}G{I|L}GQ{I|L};{[VA]|[{I|L}G]}[HT][TP]VAGQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HQ]{I|L}VAGQ{I|L};{[CP]|[EA]}[RH]{I|L}VAGQ{I|L};{[VA]|[{I|L}G]}[HA]D{I|L}N{I|L}Q{I|L};{[VA]|[{I|L}G]}[HA]D{I|L}G{I|L}V[QA];{[VA]|[{I|L}G]}[HA]D{I|L}GG{I|L}Q{I|L} 6.0643;5.3055;5.1204;4.9633;4.379;4.2926;4.2764;4.2587;4.2046;4.1484 -;-;-;-;-;-;-;-;-;- 1548 1 1.786 94708.6 1.0 3901 4527 8424 HBL1_DMSO_200M_050219_2,8430 HBL1_DMSO_200M_050219_2,8430,AVHEGLGLAVQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8431 45.733 199.0 718820.0 25 0 116210.0 + 10777 FYPERVRAV 9 101 379.5450465353645 1135.6133102062936 3 379.5449401736259 MULTI CID FTMS 0 0 0 8424 429742.875 0.9612005308498274 -1 0.1070671081542968 7 Unmodified _FYPERVRAV_ ENSG00000120915|ENST00000521400|EPHX2;ENST00000520623.5_1_8:27348689-27396319:+|nuORF;nc|ENSG00000120915|P34913-2|EPHX2;nc|ENSG00000120915|P34913-3|EPHX2 14.838274106304384 0.4350285940865338 4 {M(Oxidation (M))|F}YV[WP][RV]AV 9 3 + 33.263 0.0 0.0 2.9291 2.9291 72.275 0.0 0.0 0.0 21.84340516220124 4.010878987102416 4.010878987102416 7.302046884880941 0 0.3054621874040891 0.0 0.0 0.8494850021680094 {M(Oxidation (M))|F}YV[WP][RV]AV;{M(Oxidation (M))|F}VY[WP][RV]AV 2.9291;2.2861 -;- 143 + 1 1.786 118701.9 1.0 3902 4527 8424 HBL1_DMSO_200M_050219_2,8431 HBL1_DMSO_200M_050219_2,8431,FYPERVRAV False True FYPERVRAV 45.733443 379.544940173626 3122512.25 8424.0 nc|ENSG00000120915|P34913-2|EPHX2;;ENSG00000120915|ENST00000521400|EPHX2;;nc|ENSG00000120915|P34913-3|EPHX2;;ENST00000520623.5_1_8:27348689-27396319:+|nuORF 3.803142428398132 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8432 45.735 27.0 2007500.0 25 0 202230.0 28262 PREAPARR 8 93 476.77653014795663 951.5385073627132 2 476.7770263552666 MULTI CID FTMS 0 0 0 8424 237696.890625 0.0767587896543492 -4 0.3651046752929687 8 Unmodified _PREAPARR_ ENSG00000262246|ENST00000251166|CORO7;ENST00000572274.1_1_16:4391391-4409335:-|nuORF;ENST00000575531.5_1_16:4407102-4412712:-|nuORF;nc|ENSG00000262246|P57737-2|CORO7;nc|ENSG00000262246|P57737-3|CORO7;nc|ENSG00000262246|P57737-4|CORO7 10.823927491677226 0.7510103885582552 4 AE{I|L}AQ[HV] 7 7 40.534 0.0 0.0 4.2598 0.0 0.0 185.1424481090868 0.0 185.1424481090868 0.0 6.236672758336681 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.5 AE{I|L}AQ[HV] 4.2598 - 193 + 1 1.786 46752.0 1.0 3903 4527 8424 HBL1_DMSO_200M_050219_2,8432 HBL1_DMSO_200M_050219_2,8432,PREAPARR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8433 45.748 760.0 293800.0 25 0 42988.0 -1 QNQEKFFMNRC 11 115 751.3381154404643 1500.6616779477283 2 751.3406860232353 MULTI CID FTMS 0 0 0 8424 207533.015625 0.7933379886741543 -2 0.1755409240722656 9 Carbamidomethyl (C) _QNQEKFFMNRC(Carbamidomethyl (C))_ ENSG00000171495|ENST00000399564|MROH2B;nc|ENSG00000171495|Q7Z745-2|MROH2B 8.155526934196011 0.8366696279279818 4 {[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQQNA[Y{M(Oxidation (M))|F}] 14 -1 + 90.892 0.0 0.0 6.0568 6.0568 83.228 0.0 0.0 0.0 7.126201087223379 7.569619513137056 7.126201087223379 7.126201087223379 0 0.5 0.8538719643217619 0.6237125054200234 1.8243923658886183 {[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQQNA[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}AEAQQNA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}GA{M(Oxidation (M))|F}AEA[AG]QNA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQ[AG]NA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}GA{M(Oxidation (M))|F}AEAQQGGA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}Q{M(Oxidation (M))|F}AEAQQNA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}AG{M(Oxidation (M))|F}AEAQQNA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}{M(Oxidation (M))|F}QAEAQQNA[Y{M(Oxidation (M))|F}];[AG]NA{M(Oxidation (M))|F}AEAQQNA[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}AEA[AG]QNA[Y{M(Oxidation (M))|F}] 6.0568;5.582;5.4537;5.4537;5.4537;5.4089;5.3007;5.0992;5.0866;4.9774 -;-;-;-;-;-;-;-;-;- 11629 1 1.786 157258.8 1.0 3904 4527 8424 HBL1_DMSO_200M_050219_2,8433 HBL1_DMSO_200M_050219_2,8433,QNQEKFFMNRC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8434 45.753 268.0 392460.0 25 0 21510.0 + 41162 VPARSYLLS 9 134 503.2879076481271 1004.5612623630542 2 503.2883788943291 MULTI CID FTMS 0 0 0 8424 197054.421875 1.0 0 0.0 10 Unmodified _VPARSYLLS_ REV__ENST00000579192.5_1_17:8198292-8198649:-|nuORF 20.453626601364224 0.2830276176381075 4 [VP]A[YK]MVVV 9 -1 + 35.001 0.0 0.0 3.4842 3.4842 69.622 0.0 0.0 0.0 1.7229176741866752 25.66833404959639 1.7229176741866752 3.8818017138288106 0 0.8157018393238157 0.721246399047171 0.0 0.0 [VP]A[YK]MVVV;[VP]AHV{[DA]|[EG]}VVV;[HV][PA]V{[DA]|[EG]}VVV;{[TV]|[{I|L}S]}[YT][QP]VVV;[HV]{NN|[MP]|[D{I|L}]|[EV]}[QP]VVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}]{[DA]|[EG]}VVV;[VP]N[PG][QP]VVV;[VP]A[DV][HA]VVV;[VP]S[TP][HA]VVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[VA]|[{I|L}G]}V{[DA]|[EG]}VVV 3.4842;3.0978;2.7456;2.7446;2.2907;2.0336;1.9682;1.9682;1.7352;1.6472 -;-;-;-;-;-;-;-;-;- 358 1 1.786 84114.1 1.0 3905 4527 8424 HBL1_DMSO_200M_050219_2,8434 HBL1_DMSO_200M_050219_2,8434,VPARSYLLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8435 45.766 764.0 200320.0 25 0 14739.0 + 16380 IYQESVGSY 9 189 523.2451433819091 1044.475733830618 2 523.7480956912041 MULTI CID FTMS 0 0 0 8424 175074.71875 0.4338233961773239 -3 0.2602500915527344 11 Unmodified _IYQESVGSY_ ENSG00000204267|ENST00000374897|TAP2;nc|ENSG00000204267|Q03519-2|TAP2 23.1484247019978 0.2366544122328345 4 GSY 3 6 28.616 0.0 0.0 2.7398 0.0 0.0 719.3483057073744 0.0 719.3483057073744 0.0 13.817860680065184 0.0 0.0 0 0.0 0.0 0.6643943297944485 0.0 + GSY 2.7398 + + 875 + 1 1.786 123171.1 1.0 3906 4527 8424 HBL1_DMSO_200M_050219_2,8435 HBL1_DMSO_200M_050219_2,8435,IYQESVGSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8436 45.779 758.0 233760.0 25 0 12860.0 + 23191 LSSALEKEEF 10 152 576.790741478073 1151.5669300229458 2 576.7877685427666 MULTI CID FTMS 0 0 0 8424 160811.90625 0.6051283938791261 -2 0.1755409240722656 12 Unmodified _LSSALEKEEF_ REV__ENSG00000061337|ENST00000381569|LZTS1;REV__nc|ENSG00000061337|Q9Y250-2|LZTS1;REV__nc|ENSG00000061337|Q9Y250-3|LZTS1;REV__nc|ENSG00000061337|Q9Y250-4|LZTS1;REV__nc|ENSG00000061337|Q9Y250-5|LZTS1 24.020572477871973 0.4289996903560794 4 {[TV]|[{I|L}S]}S[RP]SKT[YN] 10 -1 + 43.777 0.0 0.0 3.8015 3.8015 74.335 0.0 0.0 0.0 7.129744552767534 5.764837301042718 5.764837301042718 7.129744552767534 0 0.0 1.5228787452803376 0.5866968715561641 0.3807196863200844 {[TV]|[{I|L}S]}S[RP]SKT[YN];{[DA]|[EG]}[{I|L}A]G{I|L}SKT[YN];{[DA]|[EG]}Q{I|L}{I|L}SKT[YN];{[QN]|[E{I|L}]|[KN]}QG{I|L}SKT[YN];AAPTS{I|L}SKT[YN];[TA]PTG{I|L}SKT[YN];[TA]PAS{I|L}SKT[YN];{[MG]|[TS]}V[RP]SKT[YN];{[TV]|[{I|L}S]}S[RP]S[Y{M(Oxidation (M))|F}][VP];[PS][VS]G{I|L}SKT[YN] 3.8015;3.1824;3.086;2.8309;2.679;2.5601;2.4305;2.1944;2.1384;2.0818 -;-;-;-;-;-;-;-;-;- 1292 1 1.786 133043.7 1.0 3907 4527 8424 HBL1_DMSO_200M_050219_2,8436 HBL1_DMSO_200M_050219_2,8436,LSSALEKEEF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8437 45.793 800.0 484220.0 25 0 91867.0 + 11484 GIIKQDPKL 9 219 506.3132764254632 1010.6119999177264 2 506.3135253787041 MULTI CID FTMS 0 0 0 8424 165684.890625 0.6158099201083805 -1 0.1070671081542968 13 Unmodified _GIIKQDPKL_ ENSG00000103365|ENST00000309859|GGA2 41.95555342248728 0.0647214845423414 4 {[VA]|[{I|L}G]}{I|L} 3 6 24.939 0.0 0.0 2.4677 0.0 0.0 0.0 724.4015830262902 724.4015830262902 8.32294737718189 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 + {[VA]|[{I|L}G]}{I|L} 2.4677 + + 1333 + 1 1.786 296615.4 0.9900000095367432 3908 4527 8424 HBL1_DMSO_200M_050219_2,8437 HBL1_DMSO_200M_050219_2,8437,GIIKQDPKL True True GIIKQDPKL 45.792924 506.313525378704 1506679.125 8424.0 ENSG00000103365|ENST00000309859|GGA2 2.603562295436859 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8439 45.797 0.74 63235000.0 25 0 7058600.0 + 3663 DAEMTTRMV 9 62 527.2378385896784 1052.4611242461567 2 527.2394897341728 MULTI CID FTMS 0 0 0 8438 77042272.0 1.0 0 0.0 1 Unmodified _DAEMTTRMV_ ENSG00000205220|ENST00000358514|PSMB10 53.832793166522166 0.0319663582346103 4 {[DA]|[EG]}EMTT{[WT]|[RM]}V 9 0 + 70.762 0.0 0.0 6.7235 6.7235 92.307 0.0 0.0 0.0 49.79296988787237 6.8611448738651575 6.8611448738651575 22.21848749616357 0 1.0 1.6989700043360187 0.8494850021680094 0.3807196863200844 + + {[DA]|[EG]}EMTT{[WT]|[RM]}V;{[DA]|[EG]}E[W{M(Oxidation (M))|F}]{[WT]|[RM]}V;{[DA]|[EG]}{M(Oxidation (M))|F}[WE]{[WT]|[RM]}V;{[DA]|[EG]}{M(Oxidation (M))|F}{[ET]|[MV]}WWV;{[CT]|[{M(Oxidation (M))|F}G]}E[WE]{[WT]|[RM]}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KT]{[ET]|[MV]}EW 6.7235;4.6124;3.4477;2.6326;0.66876;0.1038 +;-;-;-;-;- + 55 + 1 1.786 41156.6 1.0 3909 4528 8438 HBL1_DMSO_200M_050219_2,8439 HBL1_DMSO_200M_050219_2,8439,DAEMTTRMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8440 45.798 17.0 2491600.0 25 0 269130.0 + 24995 MPPPPPQGV 9 73 460.23852327962805 918.462493626056 2 460.2391540408134 MULTI CID FTMS 0 0 0 8438 2821254.0 0.1522365096654735 70 -5.528228759765625 2 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 56.541270873467816 0.0279970378729908 4 MPPPQR 6 4 53.831 0.0 0.0 5.861 0.0 0.0 194.1060963361344 0.0 194.1060963361344 0.0 31.435078169319297 0.0 0.0 0 1.2059771852360797 0.0 0.0 0.0 MPPPQR 5.861 - 166 1 1.786 39404.6 1.0 3910 4528 8438 HBL1_DMSO_200M_050219_2,8440 HBL1_DMSO_200M_050219_2,8440,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8441 45.8 83.0 813220.0 25 0 92253.0 + 18286 KVIGGFAGT 9 98 425.24462432821633 848.4746957232327 2 425.2448608279228 MULTI CID FTMS 0 0 0 8438 629815.375 0.5302268436571963 -2 0.1842041015625 3 Unmodified _KVIGGFAGT_ ENSG00000165948|ENST00000555523|IFI27L1 19.256988751693697 0.3154191944385105 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}AGT 8 2 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}A + + 18.184 7.9799 1.1868 2.1432 2.1432 44.69 0.0 0.0 0.0 0.0 3.2146606268368494 0.0 0.0 0 0.0 0.0 0.7215141619232908 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}AGT 2.1432 - 166 + 1 1.786 57786.5 1.0 3911 4528 8438 HBL1_DMSO_200M_050219_2,8441 HBL1_DMSO_200M_050219_2,8441,KVIGGFAGT False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8442 45.803 146.0 1090000.0 25 0 83407.0 33424 SHSDESDSDL 10 139 546.2115259649867 1090.4084989967732 2 546.2126342654228 MULTI CID FTMS 0 0 0 8438 613670.125 1.0 0 0.0 4 Unmodified _SHSDESDSDL_ ENSG00000165521|ENST00000554922|EML5;ENST00000553281.5_1_14:89088194-89171927:-|nuORF;nc|ENSG00000165521|Q05BV3-2|EML5;nc|ENSG00000165521|Q05BV3|EML5 6.723162845929126 0.6955379296933136 4 {NN|[MP]|[D{I|L}]|[EV]}[HQ]{I|L}V 6 9 24.671 0.0 0.0 2.2625 0.0 0.0 0.0 382.00320049507326 382.00320049507326 12.888110273646216 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.7302046884880937 0.0 {NN|[MP]|[D{I|L}]|[EV]}[HQ]{I|L}V 2.2625 - 254 1 1.786 122984.4 1.0 3912 4528 8438 HBL1_DMSO_200M_050219_2,8442 HBL1_DMSO_200M_050219_2,8442,SHSDESDSDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8443 45.806 158.0 935250.0 25 0 40632.0 + 26633 NWGASCCHTV 10 109 539.2163757731985 1076.4181986131969 2 539.2158691287041 MULTI CID FTMS 0 0 0 8438 575968.625 1.0 0 0.0 5 Unmodified _NWGASCCHTV_ REV__ENST00000427841.5_1_3:195711549-195712546:-|nuORF 6.723162845929126 0.6955379296933136 4 WEM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MV 7 -1 25.048 0.0 0.0 2.327 0.0 0.0 88.04527561528012 0.0 88.04527561528012 0.0 13.051048904017035 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 WEM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MV 2.327 - 283 + 1 1.786 115672.5 1.0 3913 4528 8438 HBL1_DMSO_200M_050219_2,8443 HBL1_DMSO_200M_050219_2,8443,NWGASCCHTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8444 45.815 526.0 275790.0 25 0 36975.0 + -1 CSVCYMSYNEM 11 138 693.7470077860607 1385.4794626389214 2 693.7490112185478 MULTI CID FTMS 0 0 0 8438 374963.1875 0.5795841905983568 -3 0.2526779174804687 6 Carbamidomethyl (C) _CSVC(Carbamidomethyl (C))YMSYNEM_ REV__ENSG00000119283|ENST00000366653|TRIM67;REV__nc|ENSG00000119283|Q6ZTA4-2|TRIM67 2.282774691075616 0.8643776557276657 4 YSADEAAR{[QG]|[NA]} 10 -1 48.619 0.0 0.0 3.5092 0.0 0.0 319.065721580275 0.0 319.065721580275 0.0 11.794744939681436 0.0 0.0 0 0.5 0.0 1.3609243748081783 0.0 YSADEAAR{[QG]|[NA]} 3.5092 - 1624 1 1.786 104958.8 1.0 3914 4528 8438 HBL1_DMSO_200M_050219_2,8444 HBL1_DMSO_200M_050219_2,8444,CSVCYMSYNEM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8445 45.827 675.0 298490.0 25 0 30597.0 33635 SISAGGNF 8 195 376.6821438129244 751.3497346926488 2 376.6823913455009 MULTI CID FTMS 0 0 0 8438 303136.0625 1.0 0 0.0 7 Unmodified _SISAGGNF_ ENST00000424459.7_2_5:56471490-56471616:+|nuORF 5.230669730166228 0.792582437072536 4 [RD]S{M(Oxidation (M))|F}EV 6 7 + 52.149 0.0 0.0 6.9408 6.9408 92.637 0.0 0.0 0.0 15.417885138426897 32.88516148025116 15.417885138426897 18.723637474483468 0 0.4247425010840047 0.5528419686577808 0.5941876774005248 0.5796896906561032 [RD]S{M(Oxidation (M))|F}EV;{[QD]|[EN]|[WG]|[KD]|[RS]}D{M(Oxidation (M))|F}EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD]EV;[NP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}EV;{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[RE]|[WV]}DV;[{M(Oxidation (M))|F}E][NP]{M(Oxidation (M))|F}V 6.9408;4.4488;3.9594;3.7147;3.516;2.7516;1.1616 -;-;-;-;-;-;- 256 1 1.786 157203.3 1.0 3915 4528 8438 HBL1_DMSO_200M_050219_2,8445 HBL1_DMSO_200M_050219_2,8445,SISAGGNF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8446 45.831 180.0 509670.0 25 0 48551.0 + 43108 VYPDERTAL 9 94 532.2744445319667 1062.5343361307332 2 532.2738525271416 MULTI CID FTMS 0 0 0 8438 296895.78125 0.7841181627928301 -1 0.0771369934082031 8 Unmodified _VYPDERTAL_ ENSG00000145391|ENST00000274031|SETD7 20.41453444215458 0.284085796332423 4 VYPDG 5 5 64.508 0.0 0.0 6.0712 0.0 0.0 0.0 528.2655123346311 528.2655123346311 52.28978457299817 0.0 0.0 0.0 0 0.6549471895720984 2.0 0.0 0.0 VYPDG 6.0712 - 105 + 1 1.786 79355.7 1.0 3916 4528 8438 HBL1_DMSO_200M_050219_2,8446 HBL1_DMSO_200M_050219_2,8446,VYPDERTAL False True VYPDERTAL 45.830673 532.273852527142 4670718.5 8438.0 ENSG00000145391|ENST00000274031|SETD7 5.448576291402181 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8447 45.833 103.0 591940.0 25 0 36377.0 + 25315 NAGPPSHII 9 102 453.2453106751012 904.4760684170024 2 453.2461120486259 MULTI CID FTMS 0 0 0 8438 244658.765625 0.2226899560779937 -6 0.5229339599609375 9 Unmodified _NAGPPSHII_ ENSG00000132128|ENST00000617190|LRRC41;nc|ENSG00000132128|Q15345-3|LRRC41 34.10243960390752 0.1078313939113124 4 {[QG]|[NA]}GP{I|L} 5 4 43.188 0.0 0.0 4.7749 0.0 0.0 0.0 449.22068201236567 449.22068201236567 30.96910013008056 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 {[QG]|[NA]}GP{I|L} 4.7749 - 107 + 1 1.786 56156.7 1.0 3917 4528 8438 HBL1_DMSO_200M_050219_2,8447 HBL1_DMSO_200M_050219_2,8447,NAGPPSHII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8448 45.846 735.0 340360.0 25 0 51564.0 -1 0 189 412.20935888078174 411.20208241418175 1 412.2088500857353 MULTI CID FTMS 0 0 0 8438 250938.3125 0.0337240432381319 14 -1.0659942626953125 10 4 [HA]S 3 -1 20.19 0.0 0.0 4.9099 0.0 0.0 0.0 113.04812668591924 113.04812668591924 10.585456211725202 0.0 0.0 0.0 0 0.0 1.0 0.2742275032520141 0.0 [HA]S 4.9099 - 24 1 1.786 193457.5 1.0 3918 4528 8438 HBL1_DMSO_200M_050219_2,8448 HBL1_DMSO_200M_050219_2,8448, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8449 45.859 800.0 201890.0 25 0 14251.0 + -1 IGGVVLMK 8 168 416.7513259654405 831.488098997681 2 416.7523986697197 MULTI CID FTMS 0 0 0 8438 172651.296875 0.536526301856512 -7 0.6039047241210938 11 Oxidation (M) _IGGVVLM(Oxidation (M))K_ REV__ENSG00000065427|ENST00000302445|KARS1;REV__nc|ENSG00000065427|Q15046-2|KARS1 9.347437153973935 0.7675937258251505 4 {M(Oxidation (M))|F}K 2 -1 20.362 0.0 0.0 2.4488 0.0 0.0 538.3468158939686 0.0 538.3468158939686 0.0 5.669015600442577 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 {M(Oxidation (M))|F}K 2.4488 + + 219 + 1 1.786 128013.7 0.9300000071525574 3919 4528 8438 HBL1_DMSO_200M_050219_2,8449 HBL1_DMSO_200M_050219_2,8449,IGGVVLMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8451 45.864 28.0 1185600.0 25 0 89840.0 + 18243 KVIDPATATSV 11 64 551.3112169274885 1100.607880921777 2 551.3112060427666 MULTI CID FTMS 0 0 0 8450 2419303.0 0.9691668092126215 1 -0.0936927795410156 1 Unmodified _KVIDPATATSV_ ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4 42.312485326615175 0.1767732348921932 4 TATW 4 8 45.165 0.0 0.0 4.1036 0.0 0.0 623.3638783185562 0.0 623.3638783185562 0.0 18.994112934271143 0.0 0.0 0 0.9247425010840048 0.0 1.0 0.0 TATW 4.1036 - 72 1 1.771 34711.0 1.0 3920 4529 8450 HBL1_DMSO_200M_050219_2,8451 HBL1_DMSO_200M_050219_2,8451,KVIDPATATSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8452 45.865 33.0 1112600.0 25 0 181980.0 -1 VTNSAICSMQA 11 65 570.7535119511979 1139.4924709691957 2 570.7548095583916 MULTI CID FTMS 0 0 0 8450 1733182.375 0.7361922984251157 1 -0.0936927795410156 2 Oxidation (M) _VTNSAICSM(Oxidation (M))QA_ ENST00000511961.5_1_5:141354501-141357950:+|nuORF 8.155526934196011 0.8366696279279818 4 {I|L} 1 -1 3.9794 0.0 0.0 0.34923 0.0 0.0 643.2264320061082 380.1584871881469 1023.3849191942552 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.34923 + + 34 + 1 1.771 33124.7 1.0 3921 4529 8450 HBL1_DMSO_200M_050219_2,8452 HBL1_DMSO_200M_050219_2,8452,VTNSAICSMQA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8453 45.866 27.0 2550700.0 25 0 416580.0 + 15246 IPFVCNLFLH 10 53 601.8237287449131 1201.632904556626 2 601.8241454958916 MULTI CID FTMS 0 0 0 8450 2340348.0 0.6644692283635634 -4 0.3192291259765625 3 Unmodified _IPFVCNLFLH_ REV__ENST00000395323.7_1_2:30480492-30480585:+|nuORF 2.0860074813731053 0.7169874864248246 4 {I|L}P 2 -1 10.969 0.0 0.0 0.91285 0.0 0.0 97.9747628223882 890.4974666731866 988.4722294955748 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}P 0.91285 + + 4 + 1 1.771 56666.3 1.0 3922 4529 8450 HBL1_DMSO_200M_050219_2,8453 HBL1_DMSO_200M_050219_2,8453,IPFVCNLFLH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8454 45.869 125.0 434700.0 25 0 53160.0 -1 FQACNEFSEC 10 77 617.729457046581 1233.444361159962 2 617.7304565310478 MULTI CID FTMS 0 0 0 8450 916892.3125 0.7143611141680407 2 -0.1572341918945312 4 Carbamidomethyl (C) _FQAC(Carbamidomethyl (C))NEFSEC_ ENSG00000081148|ENST00000193391|IMPG2 3.944395688203298 0.708391353636983 4 [AG]{M(Oxidation (M))|F}QDASS 8 -1 35.817 0.0 0.0 2.9038 0.0 0.0 0.0 467.1057740840433 467.1057740840433 19.67639510717215 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.4247425010840047 0.5501648626366046 [AG]{M(Oxidation (M))|F}QDASS 2.9038 - 345 1 1.771 45421.7 1.0 3923 4529 8450 HBL1_DMSO_200M_050219_2,8454 HBL1_DMSO_200M_050219_2,8454,FQACNEFSEC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8455 45.87 56.0 1446500.0 25 0 219500.0 + 14529 IGVELNWRCI 10 77 401.5515109185615 1201.6327033558844 3 401.5515624880791 MULTI CID FTMS 0 0 0 8450 916984.5625 0.5573936287984668 -4 0.3192291259765625 5 Unmodified _IGVELNWRCI_ REV__ENST00000588858.5_1_19:13886394-13889009:+|nuORF 3.5964929083625545 0.7100006075494749 4 VVAM 4 -1 10.934 0.0 0.0 0.90997 0.0 0.0 0.0 798.4042847369968 798.4042847369968 0.2211572911418393 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 VVAM 0.90997 - 34 1 1.771 66679.1 1.0 3924 4529 8450 HBL1_DMSO_200M_050219_2,8455 HBL1_DMSO_200M_050219_2,8455,IGVELNWRCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8456 45.872 103.0 891790.0 25 0 109560.0 4333 DASDQDQPTV 10 94 538.229403255758 1074.444253578316 2 538.2297851443291 MULTI CID FTMS 0 0 0 8450 461787.9375 0.8114665921894959 1 -0.0936927795410156 6 Unmodified _DASDQDQPTV_ ENSG00000091490|ENST00000399878|SEL1L3;ENST00000512286.1_1_4:25750049-25759447:-|nuORF;nc|ENSG00000091490|Q68CR1-2|SEL1L3;nc|ENSG00000091490|Q68CR1-3|SEL1L3 9.38312468134398 0.6832340498775793 4 K 1 10 12.764 0.0 0.0 1.188 0.0 0.0 928.3384471591738 0.0 928.3384471591738 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 K 1.188 - 61 + 1 1.771 72739.0 1.0 3925 4529 8450 HBL1_DMSO_200M_050219_2,8456 HBL1_DMSO_200M_050219_2,8456,DASDQDQPTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8457 45.875 134.0 452830.0 25 0 81698.0 + 13582 HPLPEVAHV 9 93 499.77565564612615 997.5367583590524 2 499.7744323611259 MULTI CID FTMS 0 0 0 8450 448131.875 1.0 0 0.0 7 Unmodified _HPLPEVAHV_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000567266.5_1_16:85833348-85838718:+|nuORF;ENST00000569997.1_1_16:85838427-85838718:+|nuORF 50.855029805455786 0.0384952370514206 4 HP{I|L}V[EP]AHV 9 2 + 49.637 0.0 0.0 4.976 4.976 70.51 0.0 0.0 0.0 1.5678398223007548 1.5678398223007548 1.5678398223007548 1.5678398223007548 0 1.9802046884880933 0.0 0.3494850021680094 0.0 HP{I|L}V[EP]AHV;[{I|L}P]DV[YR]HV;[{I|L}P]DA[{I|L}P]HHV;[{I|L}P]DAH[{I|L}P]HV;HP{I|L}[EP]VAHV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[DA]|[EG]}[{I|L}P]HV;[{I|L}P]H{[DA]|[EG]}[{I|L}P]HV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}V{[ET]|[MV]}V;[{I|L}P]H{[CT]|[{M(Oxidation (M))|F}G]}V{[ET]|[MV]}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[R{M(Oxidation (M))|F}]{[ET]|[MV]}V 4.976;4.8188;4.8134;4.6882;4.6257;4.5602;4.215;3.7086;3.3635;3.3124 -;-;-;-;+;-;-;-;-;- + 441 + 1 1.771 50408.1 1.0 3926 4529 8450 HBL1_DMSO_200M_050219_2,8457 HBL1_DMSO_200M_050219_2,8457,HPLPEVAHV True True HPLPEVAHV 45.874981 499.774432361126 26680167.0 8450.0 ENSG00000131143|ENST00000253452|COX4I1;;ENST00000569997.1_1_16:85838427-85838718:+|nuORF;;ENST00000567266.5_1_16:85833348-85838718:+|nuORF 7.403426647186279 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8458 45.88 261.0 382420.0 25 0 16462.0 + 31405 RPFHGISTV 9 122 507.2790052653875 1012.5434575975752 2 507.2799560427666 MULTI CID FTMS 0 0 0 8450 381025.1875 1.0 0 0.0 8 Unmodified _RPFHGISTV_ ENSG00000137145|ENST00000434457|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C 53.832793166522166 0.0319663582346103 4 {[TV]|[{I|L}S]}{I|L}SHG{I|L}STV 10 4 + 57.447 0.0 0.0 5.6735 5.6735 86.137 0.0 0.0 0.0 6.320232147054057 33.88998720863288 6.320232147054057 11.646617972748992 0 1.1237125054200234 0.5528419686577808 0.5 0.0 {[TV]|[{I|L}S]}{I|L}SHG{I|L}STV;[RP]{M(Oxidation (M))|F}HG{I|L}STV;{[MS]|[{M(Oxidation (M))|F}A]}S{I|L}GHS[VP]V;{[MG]|[TS]}V[H{I|L}]G{I|L}STV;{[TV]|[{I|L}S]}S[H{I|L}]G{I|L}STV;{[MS]|[{M(Oxidation (M))|F}A]}S{I|L}G[YR]TV;{[CT]|[{M(Oxidation (M))|F}G]}YVK{I|L}STV;{[MS]|[{M(Oxidation (M))|F}A]}S{I|L}K[{M(Oxidation (M))|F}T]TV;{[MS]|[{M(Oxidation (M))|F}A]}S{I|L}KV{[{M(Oxidation (M))|F}C]|[YS]}V;{[MS]|[{M(Oxidation (M))|F}A]}S{I|L}K[WY]V 5.6735;4.5233;4.3785;4.2624;4.1906;4.0708;3.7042;3.4257;3.2116;3.043 -;+;-;-;-;-;-;-;-;- + 576 1 1.771 82292.3 1.0 3927 4529 8450 HBL1_DMSO_200M_050219_2,8458 HBL1_DMSO_200M_050219_2,8458,RPFHGISTV True True RPFHGISTV 45.879815 507.279956042767 2465670.75 8450.0 nc|ENSG00000137145|Q5VZ89-3|DENND4C;;ENSG00000137145|ENST00000434457|DENND4C;;nc|ENSG00000137145|Q5VZ89|DENND4C 6.0401997566223145 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8459 45.885 257.0 348600.0 25 0 48197.0 + 43714 YCAEIAHNV 9 103 510.23419215037615 1018.4538313675524 2 510.2351562380791 MULTI CID FTMS 0 0 0 8450 329725.21875 0.5589723607867735 2 -0.1572341918945312 9 Unmodified _YCAEIAHNV_ ENSG00000144713|ENST00000429711|RPL32;ENST00000458542.1_1_3:25791186-25791384:+|nuORF 47.74868867922204 0.0453060283459952 4 YCAE{I|L}AHNV 9 0 + 79.095 0.0 0.0 7.7662 7.7662 93.907 0.0 0.0 0.0 50.13341532440931 12.76999478187902 12.76999478187902 13.526909627198409 0 0.9650302283996908 2.0 0.0 0.6694451763165201 + + YCAE{I|L}AHNV;YC{[QN]|[E{I|L}]|[KN]}AAHNV;YCAE{I|L}AHGGV;YC{[QN]|[E{I|L}]|[KN]}AAHGGV;YCA{[MG]|[TS]}[TA][R{M(Oxidation (M))|F}];YCA[TA]{[MG]|[TS]}[R{M(Oxidation (M))|F}];YC{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[TA][R{M(Oxidation (M))|F}];Y[YG]AEN[R{M(Oxidation (M))|F}];Y[YQ]EN[R{M(Oxidation (M))|F}];Y[YG]N{[CP]|[EA]}[R{M(Oxidation (M))|F}] 7.7662;6.438;6.2047;5.2504;4.5747;4.5747;3.8604;1.8597;1.2303;1.028 +;-;-;-;-;-;-;-;-;- + 599 + 1 1.771 72818.8 1.0 3928 4529 8450 HBL1_DMSO_200M_050219_2,8459 HBL1_DMSO_200M_050219_2,8459,YCAEIAHNV True True YCAEIAHNV 45.884579 510.235156238079 11089711.0 8450.0 ENSG00000144713|ENST00000429711|RPL32;;ENST00000458542.1_1_3:25791186-25791384:+|nuORF 8.675542990366617 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8460 45.896 674.0 183660.0 25 0 37849.0 + 28811 PYVSVSFPVAC 11 117 584.7895903481328 1167.5646277630656 2 584.7891723513603 MULTI CID FTMS 0 0 0 8450 176593.65625 1.0 0 0.0 10 Unmodified _PYVSVSFPVAC_ REV__ENST00000379731.4_1_9:33110948-33111104:-|nuORF 30.63653989081413 0.3728473165938781 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VSVSNTV 9 -1 50.421 0.0 0.0 4.3185 0.0 0.0 0.0 218.0649078746468 218.0649078746468 13.576315990684256 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.960409376976188 0.3807196863200844 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VSVSNTV 4.3185 - 1272 1 1.771 95733.4 1.0 3929 4529 8450 HBL1_DMSO_200M_050219_2,8460 HBL1_DMSO_200M_050219_2,8460,PYVSVSFPVAC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8461 45.91 800.0 237050.0 25 0 43866.0 -1 0 103 966.4323678807548 1930.8501828283097 2 966.4318115115166 MULTI CID FTMS 0 0 0 8450 162076.6875 0.1133148450689504 -11 0.9692497253417968 11 4 AE{M(Oxidation (M))|F}DQ 5 -1 28.443 0.0 0.0 1.4731 0.0 0.0 983.4398567558472 354.1671716937003 1337.6070284495477 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 AE{M(Oxidation (M))|F}DQ 1.4731 - 1790 + 1 1.771 128465.1 0.9200000166893004 3930 4529 8450 HBL1_DMSO_200M_050219_2,8461 HBL1_DMSO_200M_050219_2,8461, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8462 45.924 800.0 75746.0 25 0 12819.0 -1 0 37 1153.7919573153831 0 1153.791064441204 PEAK CID FTMS 0 0 0 8450 158560.453125 1.0 0 0.0 12 4 Y 1 -1 6.9897 0.0 0.0 0.30317 0.0 0.0 159.66208738291635 1979.824130718684 2139.4862181016 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.30317 - 4 + 1 1.771 52765.6 0.7900000214576721 3931 4529 8450 HBL1_DMSO_200M_050219_2,8462 HBL1_DMSO_200M_050219_2,8462, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8463 45.938 794.0 227520.0 25 0 9641.3 + 42271 VSPYYATY 8 180 482.227027587423 962.439502241646 2 482.2272827029228 MULTI CID FTMS 0 0 0 8450 138697.65625 0.7226077358464609 5 -0.2507209777832031 13 Unmodified _VSPYYATY_ REV__nc|ENSG00000104413|Q6NXG1-2|ESRP1 13.50788311687929 0.7113601687236069 4 V 1 -1 12.474 0.0 0.0 1.2961 0.0 0.0 845.3598951633242 0.0 845.3598951633242 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2961 + + 620 + 1 1.771 138234.9 1.0 3932 4529 8450 HBL1_DMSO_200M_050219_2,8463 HBL1_DMSO_200M_050219_2,8463,VSPYYATY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8464 45.953 800.0 264230.0 25 0 19883.0 + -1 PLCKFISL 8 175 489.2793981803391 0 489.2791320681572 PEAK CID FTMS 0 0 0 8450 119926.34375 1.0 0 0.0 14 Carbamidomethyl (C) _PLC(Carbamidomethyl (C))KFISL_ REV__ENST00000497746.1_1_7:131149041-131155790:+|nuORF 19.438996006549623 0.4285751805470146 4 {I|L}P{M(Oxidation (M))|F} 3 -1 20.007 0.0 0.0 2.0487 0.0 0.0 131.09242276824608 485.2417696588501 616.3341924270961 0.0 0.0 0.0 0.0 0 0.8324385367314691 0.0 0.0 0.0 {I|L}P{M(Oxidation (M))|F} 2.0487 - 196 + 1 1.771 162406.1 0.8399999737739563 3933 4529 8450 HBL1_DMSO_200M_050219_2,8464 HBL1_DMSO_200M_050219_2,8464,PLCKFISL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8466 45.959 101.0 645940.0 25 0 51435.0 + 3656 DAEMTTRMV 9 98 535.2354195684488 1068.4562862036976 2 535.2360717654228 MULTI CID FTMS 0 0 0 8465 757302.75 0.4655472896399967 3 -0.1467552185058593 1 Oxidation (M) _DAEM(Oxidation (M))TTRMV_ ENSG00000205220|ENST00000358514|PSMB10 66.45667989310934 0.0225072657982126 4 {[DA]|[EG]}E{M(Oxidation (M))|F}TTRMV 9 0 + 74.421 0.0 0.0 6.9653 6.9653 82.033 0.0 0.0 0.0 16.355830254716253 3.357921019231924 3.357921019231924 3.357921019231924 0 1.25 2.0 1.110924374808178 0.0 + + {[DA]|[EG]}E{M(Oxidation (M))|F}TTRMV;{[DA]|[EG]}E{M(Oxidation (M))|F}TTRVM;WEMTKE{M(Oxidation (M))|F}V;WEM{[MS]|[{M(Oxidation (M))|F}A]}RMV;WEMTK{[{M(Oxidation (M))|F}D]|MM}{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}DDTRMV;WEM{[MS]|[{M(Oxidation (M))|F}A]}RVM;{[DA]|[EG]}{M(Oxidation (M))|F}DDTRVM;{[DA]|[EG]}[YR]A{I|L}E[EC];{[DA]|[EG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[KP]DMV 6.9653;6.651;4.6667;4.4418;4.1802;4.1759;4.1275;3.8617;3.2263;2.9195 +;-;-;-;-;-;-;-;-;- + 452 + 1 1.759 55153.1 1.0 3934 4530 8465 HBL1_DMSO_200M_050219_2,8466 HBL1_DMSO_200M_050219_2,8466,DAEMTTRMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8467 45.96 52.0 1147500.0 25 0 105740.0 + 2444 AQTPPGPSL 9 94 434.2317071666667 866.4488614001334 2 434.2320739626884 MULTI CID FTMS 0 0 0 8465 1206924.125 0.9289504499429616 1 -0.0635414123535156 2 Unmodified _AQTPPGPSL_ ENSG00000167978|ENST00000301740|SRRM2;nc|ENSG00000167978|Q9UQ35-2|SRRM2 65.23502041540118 0.0231836506122253 4 [QA]TPPGPS{I|L} 9 0 [QA]T + + 35.754 16.012 5.3349 4.1265 4.1265 49.112 0.0 0.0 0.0 0.0 17.60334847558672 0.0 0.0 0 0.805462187404089 0.0 0.6307196863200843 0.0 + + [QA]TPPGPS{I|L} 4.1265 + + 202 + 1 1.759 52862.9 1.0 3935 4530 8465 HBL1_DMSO_200M_050219_2,8467 HBL1_DMSO_200M_050219_2,8467,AQTPPGPSL True True AQTPPGPSL 45.959939 434.232073962688 39975312.0 8465.0 nc|ENSG00000167978|Q9UQ35-2|SRRM2;;ENSG00000167978|ENST00000301740|SRRM2 6.973952929178874 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8468 45.961 60.0 651540.0 25 0 43099.0 + 16330 IYHNPTANSF 10 74 582.2772613445146 1162.5399697558291 2 582.2775756716728 MULTI CID FTMS 0 0 0 8465 942526.25 0.9227571018499664 -2 0.1602439880371093 3 Unmodified _IYHNPTANSF_ ENSG00000125753|ENST00000245932|VASP;ENST00000586619.1_1_19:46010999-46025451:+|nuORF 39.94969957227396 0.1580982266129622 4 [NS]{M(Oxidation (M))|F}[TA][Y{I|L}]NS{M(Oxidation (M))|F} 10 6 [NS]{M(Oxidation (M))|F}[TA][Y{I|L}]N + + 29.464 15.864 1.7424 2.5344 2.5344 45.15 0.0 0.0 0.0 0.0 6.330312844383599 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 [NS]{M(Oxidation (M))|F}[TA][Y{I|L}]NS{M(Oxidation (M))|F} 2.5344 - 139 + 1 1.759 38063.9 1.0 3936 4530 8465 HBL1_DMSO_200M_050219_2,8468 HBL1_DMSO_200M_050219_2,8468,IYHNPTANSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8469 45.965 204.0 368470.0 25 0 42100.0 + 3789 DAHSNLASI 9 101 464.2298611478968 926.4451693625936 2 464.2296630740166 MULTI CID FTMS 0 0 0 8465 421893.84375 0.155170655270891 -6 0.4976310729980469 4 Unmodified _DAHSNLASI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 41.8396318013385 0.0653578398400075 4 {[TV]|[{I|L}S]}A[HN]DAS{I|L} 9 4 + 39.56 0.0 0.0 4.2701 4.2701 74.809 0.0 0.0 0.0 1.0338109143095124 7.2184874961635614 1.0338109143095124 6.020599913279625 0 0.8182503180159344 1.5228787452803376 0.3807196863200844 0.0 {[TV]|[{I|L}S]}A[HN]DAS{I|L};{[TV]|[{I|L}S]}[HN]ADAS{I|L};{[SA]|[TG]}[HD]N{I|L}AS{I|L};{[SA]|[TG]}{I|L}[HN]DAS{I|L};{[SA]|[TG]}[HD]GG{I|L}AS{I|L};{[TV]|[{I|L}S]}A[HN]SA{NN|[MP]|[D{I|L}]|[EV]};{[TV]|[{I|L}S]}[HN]ASA{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]}[Y{I|L}]G{I|L};[{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]}[{M(Oxidation (M))|F}V]S{I|L};[{M(Oxidation (M))|F}V]{[ES]|[DT]|[{I|L}C]}[Y{I|L}]AV 4.2701;3.6203;3.1721;2.3014;2.1782;2.136;1.4862;1.2875;1.2034;0.53303 -;-;-;-;-;-;-;-;-;- 196 1 1.759 64246.1 1.0 3937 4530 8465 HBL1_DMSO_200M_050219_2,8469 HBL1_DMSO_200M_050219_2,8469,DAHSNLASI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8470 45.967 60.0 893030.0 25 0 50453.0 + 30659 RFPDTVKQM 9 91 561.2916034793321 1120.5686540254642 2 561.7938110232353 MULTI CID FTMS 0 0 0 8465 401568.15625 0.777172062503349 1 -0.0635414123535156 5 Unmodified _RFPDTVKQM_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 24.99096001346401 0.2132109383330889 4 {[QV]|[N{I|L}]|[RA]|[KV]}C(Carbamidomethyl (C))KTVKE 8 5 46.274 0.0 0.0 4.1295 0.0 0.0 0.0 145.0214155422846 145.0214155422846 37.3211703151399 0.0 0.0 0.0 0 1.0044321917401078 2.0 0.4247425010840047 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}C(Carbamidomethyl (C))KTVKE 4.1295 - 131 1 1.759 44556.7 1.0 3938 4530 8465 HBL1_DMSO_200M_050219_2,8470 HBL1_DMSO_200M_050219_2,8470,RFPDTVKQM False True RFPDTVKQM 45.96681 561.793811023235 12386626.0 8465.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 4.339477062225342 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8471 45.972 303.0 642250.0 25 0 32955.0 + 13971 HYTQKSLSL 9 158 538.79056026255 1075.5665675919 2 538.7904540896416 MULTI CID FTMS 0 0 0 8465 349818.40625 0.8552489925170415 -1 0.0936927795410156 6 Unmodified _HYTQKSLSL_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1 65.47368725323818 0.0230515101691092 4 {[WN]|[YH]}[QT]KS{I|L}S{I|L} 9 0 + 46.172 0.0 0.0 4.2928 4.2928 78.153 0.0 0.0 0.0 18.73061124105967 11.962724883926654 11.962724883926654 9.208187539523742 0 1.4049471895720984 1.6989700043360187 0.805462187404089 0.0 + + {[WN]|[YH]}[QT]KS{I|L}S{I|L};{[WN]|[YH]}[{M(Oxidation (M))|F}V][TP]{I|L}S{I|L};HY[QT]MRK{I|L};HY[QT]MR{I|L}K;{[WN]|[YH]}[QT]K{[WT]|[RM]}{I|L};[QT]KTVYHS{I|L};{[WN]|[YH]}[{M(Oxidation (M))|F}V]R{[QN]|[E{I|L}]|[KN]}{I|L};{[SA]|[TG]}AKTVYHS{I|L};[QT]{[WN]|[YH]}KS{I|L}S{I|L};{[WN]|[YH]}[QT]M[RK]{I|L} 4.2928;3.4367;2.5514;2.4256;2.2427;2.2212;2.0103;1.9413;1.8285;1.6829 +;-;-;-;-;-;-;-;-;- + 1161 1 1.759 148812.7 1.0 3939 4530 8465 HBL1_DMSO_200M_050219_2,8471 HBL1_DMSO_200M_050219_2,8471,HYTQKSLSL True True HYTQKSLSL 45.972366 538.790454089642 7586612.5 8465.0 nc|ENSG00000211896|P01857|IGHG1;;nc|ENSG00000211892|P01861-1|IGHG4;;nc|ENSG00000211893|P01859|IGHG2;;nc|ENSG00000211893|P01859-1|IGHG2;;nc|ENSG00000211892|P01861|IGHG4;;nc|ENSG00000211896|P01857-1|IGHG1 5.567297458648682 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 8472 45.976 160.0 450000.0 25 0 48692.0 + 993 AFTSHPQEL 9 107 515.2530583560914 1028.4915637789827 2 515.2544433474541 MULTI CID FTMS 0 0 0 8465 322847.78125 0.7170324485925524 -1 0.0936927795410156 7 Unmodified _AFTSHPQEL_ ENSG00000131697|ENST00000378156|NPHP4;ENST00000460696.1_1_1:5925137-5925323:-|nuORF;ENST00000489180.6_1_1:5923327-5936049:-|nuORF 62.57269311338072 0.0246576765497938 4 {[QN]|[E{I|L}]|[KN]}RSHST{[CP]|[EA]} 9 6 + 56.384 0.0 0.0 5.4822 5.4822 83.565 0.0 0.0 0.0 14.850680276396346 37.40471879010343 14.850680276396346 9.208187539523747 0 0.7302046884880937 0.9208187539523752 1.1549471895720984 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}RSHST{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}[VG]SHST{[CP]|[EA]};[QA][KA]SHST{[CP]|[EA]};[{I|L}T][RD]HST{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}TSHS[PS]VP;{[QN]|[E{I|L}]|[KN]}[EP]GWW{I|L};[QP]E{I|L}H{[MG]|[TS]}{[MS]|[{M(Oxidation (M))|F}A]};{[QN]|[E{I|L}]|[KN]}[EP]RW{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}[EP]G[{I|L}A]T{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}[EP]G{[RE]|[WV]}{[CP]|[EA]} 5.4822;4.5869;3.2435;2.8164;2.7575;1.4953;1.2736;1.265;1.0878;1.0381 -;-;-;-;-;-;-;-;-;- 457 1 1.759 61398.8 1.0 3940 4530 8465 HBL1_DMSO_200M_050219_2,8472 HBL1_DMSO_200M_050219_2,8472,AFTSHPQEL True True AFTSHPQEL 45.975535 515.254443347454 3325322.75 8465.0 ENSG00000131697|ENST00000378156|NPHP4;;ENST00000489180.6_1_1:5923327-5936049:-|nuORF;;ENST00000460696.1_1_1:5925137-5925323:-|nuORF 6.894245783487956 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8473 45.989 768.0 279020.0 25 0 17840.0 -1 ESFCCCLM 8 178 553.6942133146847 1105.3738736961693 2 553.6950561404228 MULTI CID FTMS 0 0 0 8465 190844.046875 0.3834240701917977 2 -0.1117057800292968 8 3 Carbamidomethyl (C) _ESFC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))LM_ ENST00000367996.5_1_1:161160813-161160879:-|nuORF 5.760428011301431 0.7893668129297577 4 {[RE]|[WV]}AP{[QG]|[NA]}DS 8 -1 34.263 0.0 0.0 3.0996 0.0 0.0 0.0 261.9733969718131 261.9733969718131 13.524719120559787 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.805462187404089 {[RE]|[WV]}AP{[QG]|[NA]}DS 3.0996 - 1966 1 1.759 158967.9 1.0 3941 4530 8465 HBL1_DMSO_200M_050219_2,8473 HBL1_DMSO_200M_050219_2,8473,ESFCCCLM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8474 46.003 800.0 228290.0 25 0 21304.0 44200 YLFYCKNCRFY 11 117 760.3439428317654 1518.673332730331 2 760.3453857302666 MULTI CID FTMS 0 0 0 8465 177641.25 0.8434942663884855 -2 0.1602439880371093 9 Unmodified _YLFYCKNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 4 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F}Y 14 12 + 91.842 0.0 0.0 6.0475 6.0475 81.035 0.0 0.0 0.0 5.02854206192292 10.7521226932964 5.02854206192292 5.02854206192292 0 1.1237125054200234 0.8538719643217619 0.3252574989159953 2.043157681736544 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}AG[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQQGGA{M(Oxidation (M))|F}Y 6.0475;5.7164;5.4516;5.4516;5.4516;5.4279;5.3534;5.119;5.119;5.119 -;-;-;-;-;-;-;-;-;- 8038 1 1.759 130359.7 0.8799999952316284 3942 4530 8465 HBL1_DMSO_200M_050219_2,8474 HBL1_DMSO_200M_050219_2,8474,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8475 46.017 800.0 123350.0 25 0 5242.0 + 20920 LNDLQDKMQF 10 133 634.3023954875832 1266.5902380419664 2 634.3040038943291 MULTI CID FTMS 0 0 0 8465 117381.890625 0.5332313448657954 -5 0.4129219055175781 10 Oxidation (M) _LNDLQDKM(Oxidation (M))QF_ REV__ENSG00000136634|ENST00000423557|IL10 47.74868867922204 0.0933642699623533 4 [KQ]{I|L}QEEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 69.707 0.0 0.0 5.5035 5.5035 79.975 0.0 0.0 0.0 0.7918124604762511 61.40653436550123 0.7918124604762511 6.127264369425916 0 1.0189301784845295 0.0 1.086696871556164 1.3737125054200234 [KQ]{I|L}QEEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QEEA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[KQ]{I|L}[AG]EEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]A[KG]EEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEEA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[Q{I|L}]K[AG]EEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[PS]K[KG]EEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]EEA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[Q{I|L}]A[KG]EEA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F} 5.5035;5.0198;4.78;4.78;4.4936;4.2962;4.2962;4.2261;4.0593;3.7729 -;-;-;-;-;-;-;-;-;- 1085 1 1.759 79232.7 0.8399999737739563 3943 4530 8465 HBL1_DMSO_200M_050219_2,8475 HBL1_DMSO_200M_050219_2,8475,LNDLQDKMQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8477 46.021 1.8 23669000.0 25 0 2793500.0 + 41518 VPNNKITVV 9 71 492.2974984222936 982.5804439113872 2 492.2982360720634 MULTI CID FTMS 0 0 0 8476 31425330.0 0.6330178396150873 3 -0.0934867858886718 1 Unmodified _VPNNKITVV_ ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 39.94969957227396 0.0757326808254658 4 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VT 7 4 44.059 0.0 0.0 4.484 0.0 0.0 0.0 213.1236650466688 213.1236650466688 29.36645088746296 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 1.055462187404089 0.0 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VT 4.484 - 78 1 1.759 39402.7 1.0 3944 4531 8476 HBL1_DMSO_200M_050219_2,8477 HBL1_DMSO_200M_050219_2,8477,VPNNKITVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8478 46.022 11.0 5053400.0 25 0 556870.0 41802 VPVSFPLFLQ 10 64 573.8339787109896 1145.6534044887792 2 573.8347045779228 MULTI CID FTMS 0 0 0 8476 5199644.5 0.9205470228978712 1 -0.0481643676757812 2 Unmodified _VPVSFPLFLQ_ chr19:17543433-17546686|45|45.27|0.54|6.38|+|ENST00000599124|NIBAN3,NIBAN3;chr19:17546797-17549455|45|19.44|0.22|6.49|+|ENST00000600519|NIBAN3,NIBAN3;chr19:17546797-17551786|45|44.04|0.49|6.48|+|ENST00000600871|NIBAN3,NIBAN3;chr19:17549527-17553313|46|34.41|0.39|6.48|+|ENST00000601861|NIBAN3,NIBAN3;ENSG00000167483|ENST00000599164|NIBAN3;nc|ENSG00000167483|Q86XR2-2|NIBAN3;nc|ENSG00000167483|Q86XR2-3|NIBAN3;nc|ENSG00000167483|Q86XR2-4|NIBAN3;nc|ENSG00000167483|Q86XR2-5|NIBAN3;nc|ENSG00000167483|Q86XR2-7|NIBAN3;nc|ENSG00000167483|Q86XR2|NIBAN3 7.289230182591677 0.6929195370588109 4 [VP]VSKHVPV{[QG]|[NA]} 11 6 + 65.142 0.0 0.0 5.6861 5.6861 81.412 0.0 0.0 0.0 14.814860601221111 28.44653555335522 14.814860601221111 6.690067809585749 0 0.5 1.0457574905606752 0.8494850021680094 0.0 [VP]VSKHVPV{[QG]|[NA]};[VP]VSKPVHV{[QG]|[NA]};[VP][KS]VHVPV{[QG]|[NA]};[VP][KS]VPVHV{[QG]|[NA]};[KS][VP]VHVPV{[QG]|[NA]};[KS][VP]VPVHV{[QG]|[NA]} 5.6861;5.1021;4.5749;3.9909;3.3993;2.8154 -;-;-;-;-;- 199 1 1.759 45576.3 1.0 3945 4531 8476 HBL1_DMSO_200M_050219_2,8478 HBL1_DMSO_200M_050219_2,8478,VPVSFPLFLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8479 46.023 14.0 2984200.0 25 0 261180.0 + 13028 HASQPSLTV 9 65 470.248038865904 938.481524798608 2 470.2485229372978 MULTI CID FTMS 0 0 0 8476 3988406.0 0.4633546763039585 5 -0.2189559936523437 3 Unmodified _HASQPSLTV_ ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000175387|Q15796-2|SMAD2 49.93300154707207 0.0405168250806675 4 [HA]{[QS]|[NT]}[PS]{I|L}TV 9 0 + 54.881 0.0 0.0 5.8479 5.8479 79.569 0.0 0.0 0.0 4.527712246842484 16.478174818886373 4.527712246842484 4.527712246842484 0 0.8252574989159953 1.3010299956639813 1.3494850021680094 0.0 + + [HA]{[QS]|[NT]}[PS]{I|L}TV;{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}TV;[{I|L}T][PS]A[HN]TV;{[TV]|[{I|L}S]}[TP]A[HN]TV;[PS][Y{I|L}]{M(Oxidation (M))|F}{I|L}TV;[VP][YT]{M(Oxidation (M))|F}{I|L}TV;[PS][{I|L}T]A[HN]TV 5.8479;5.3654;4.1392;3.9559;3.8573;3.587;2.4478 +;-;-;-;-;-;- + 162 1 1.759 38429.5 1.0 3946 4531 8476 HBL1_DMSO_200M_050219_2,8479 HBL1_DMSO_200M_050219_2,8479,HASQPSLTV True True HASQPSLTV 46.023235 470.248522937298 871460960.0 8476.0 nc|ENSG00000175387|Q15796-2|SMAD2;;ENSG00000175387|ENST00000262160|SMAD2 6.950304826100667 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8480 46.024 19.0 2819500.0 25 0 324030.0 + 35261 SSFIGKVKS 9 67 476.77653014795663 951.5385073627132 2 476.7768737673759 MULTI CID FTMS 0 0 0 8476 3096673.25 1.0 0 0.0 4 Unmodified _SSFIGKVKS_ REV__ENST00000335500.8_1_17:42474164-42474308:-|nuORF 31.26834338654808 0.1333407332142048 4 SS{M(Oxidation (M))|F}{I|L}SKVGK 9 -1 + 86.262 0.0 0.0 9.0656 9.0656 99.154 0.0 0.0 0.0 64.32281521578109 11.404988421560333 11.404988421560333 86.26229908798236 0 1.1549471895720984 1.6989700043360187 0.4247425010840047 0.1694451763165201 SS{M(Oxidation (M))|F}{I|L}SKVGK 9.0656 - 154 + 1 1.759 48115.2 1.0 3947 4531 8476 HBL1_DMSO_200M_050219_2,8480 HBL1_DMSO_200M_050219_2,8480,SSFIGKVKS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8481 46.026 74.0 927280.0 25 0 53713.0 19549 LFQMPVSL 8 96 467.758550442108 933.502547951016 2 467.7589294314384 MULTI CID FTMS 0 0 0 8476 762254.1875 0.8215823430017379 -1 0.0635414123535156 5 Unmodified _LFQMPVSL_ ENSG00000063169|ENST00000594866|BICRA;nc|ENSG00000063169|Q9NZM4-2|BICRA 37.97399986684836 0.2681860861828418 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ERPVS{I|L} 8 3 + 71.662 0.0 0.0 7.6767 7.6767 94.574 0.0 0.0 0.0 3.4948500216800937 45.46388461952553 3.4948500216800937 18.399480616943507 0 1.674742501084005 0.0 0.7302046884880937 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ERPVS{I|L};[VP][WH]PVS{I|L};[HV][WP]PVS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[VA]|[{I|L}G]}[PG]{I|L}{M(Oxidation (M))|F}P;{[{M(Oxidation (M))|F}D]|MM}[RK]QQ{I|L};[HV][WP]PVTV;{[SA]|[TG]}[KT][RK]{M(Oxidation (M))|F}P 7.6767;5.7056;2.5669;1.7771;1.3394;0.82046;0.65685 -;-;-;-;-;-;- 376 1 1.759 59167.6 1.0 3948 4531 8476 HBL1_DMSO_200M_050219_2,8481 HBL1_DMSO_200M_050219_2,8481,LFQMPVSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8482 46.027 40.0 1093500.0 25 0 51240.0 + 30118 QVISQAAVVHA 11 85 561.8160403073024 1121.617527681405 2 561.8173095583916 MULTI CID FTMS 0 0 0 8476 641825.0 0.1923355414249611 -4 0.3009223937988281 6 Unmodified _QVISQAAVVHA_ ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1;nc|ENSG00000176623|Q96DB5-3|RMDN1 34.40172386719151 0.2986346176549658 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[QS]|[NT]}AAVV[HA] 11 0 + 52.267 0.0 0.0 4.66 4.66 82.888 0.0 0.0 0.0 30.395232366861546 7.367585652254185 7.367585652254185 14.534573365218684 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[QS]|[NT]}AAVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[QS]|[NT]}[Q{I|L}]V[HA];{[QV]|[N{I|L}]|[RA]|[KV]}[KS][PS]AVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}T{[MG]|[TS]}[KA]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QV]|[N{I|L}]|[RA]|[KV]}T[KS][TA]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VV[PS]AVV[HA];[KA]{[WT]|[RM]}[QT]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[KA][QP]A[YG]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[KA]{[WT]|[RM]}G[TA]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[KA]E{[MG]|[TS]}[KA]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.66;3.3641;2.8312;2.0476;1.7792;1.5752;0.70237;0.59098;0.59098;0.32259 +;-;-;-;-;-;-;-;-;- + 405 + 1 1.759 39335.4 1.0 3949 4531 8476 HBL1_DMSO_200M_050219_2,8482 HBL1_DMSO_200M_050219_2,8482,QVISQAAVVHA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8483 46.031 209.0 337480.0 25 0 38471.0 + 16381 IYQESVGSY 9 101 523.2451433819091 1044.475733830618 2 523.2458984255791 MULTI CID FTMS 0 0 0 8476 384952.34375 0.5630025259639367 2 -0.0832138061523437 7 Unmodified _IYQESVGSY_ ENSG00000204267|ENST00000374897|TAP2;nc|ENSG00000204267|Q03519-2|TAP2 30.22481116460888 0.1466181017706357 4 GSY 3 6 30.947 0.0 0.0 2.9629 0.0 0.0 719.350740796427 0.0 719.350740796427 0.0 18.24341035756606 0.0 0.0 0 0.0 0.0 0.7134679910804405 0.0 + GSY 2.9629 + + 242 + 1 1.759 60569.9 1.0 3950 4531 8476 HBL1_DMSO_200M_050219_2,8483 HBL1_DMSO_200M_050219_2,8483,IYQESVGSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8484 46.037 315.0 386350.0 25 0 23962.0 + 30965 RLAQHITYV 9 117 367.5452103072901 1099.6138015220704 3 367.5449401736259 MULTI CID FTMS 0 0 0 8476 216512.171875 0.8054083829138869 -1 0.0635414123535156 8 Unmodified _RLAQHITYV_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7 24.020572477871973 0.2255576514309169 4 TH{I|L}TYV 6 4 43.563 0.0 0.0 3.9616 0.0 0.0 367.2397022931656 0.0 367.2397022931656 0.0 28.958734641205623 0.0 0.0 0 0.1307196863200844 0.0 0.5 0.0 TH{I|L}TYV 3.9616 - 84 1 1.759 105661.6 1.0 3951 4531 8476 HBL1_DMSO_200M_050219_2,8484 HBL1_DMSO_200M_050219_2,8484,RLAQHITYV False True RLAQHITYV 46.037004 367.544940173626 1511435.625 8476.0 nc|ENSG00000166508|P33993-3|MCM7;;ENSG00000166508|ENST00000303887|MCM7 4.836065053939819 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8485 46.051 800.0 106450.0 25 0 8524.7 -1 FCDQHCLLRFY 11 79 751.3381154404643 1500.6616779477283 2 751.3397704958916 MULTI CID FTMS 0 0 0 8476 125572.390625 0.4800265033080455 2 -0.0832138061523437 9 Carbamidomethyl (C) _FC(Carbamidomethyl (C))DQHCLLRFY_ ENSG00000121741|ENST00000610343|ZMYM2 5.731851221503515 0.8481046878870278 4 ANQQAE[RH]GY 10 -1 61.631 0.0 0.0 4.1069 0.0 0.0 328.13812411283794 0.0 328.13812411283794 0.0 48.24662239119597 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 ANQQAE[RH]GY 4.1069 - 713 + 1 1.759 65118.4 0.7400000095367432 3952 4531 8476 HBL1_DMSO_200M_050219_2,8485 HBL1_DMSO_200M_050219_2,8485,FCDQHCLLRFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8486 46.065 800.0 258320.0 25 0 22857.0 + 35044 SQSATEVRL 9 198 495.7623341950524 989.5101154569048 2 495.7650329470634 MULTI CID FTMS 0 0 0 8476 115168.8515625 0.7741719236151322 -1 0.0635414123535156 10 Unmodified _SQSATEVRL_ ENSG00000151575|ENST00000696102|TEX9;nc|ENSG00000151575|Q8N6V9-2|TEX9 47.594388314883695 0.0456443387682827 4 {[QS]|[NT]}S[R{I|L}][KG]QS 9 6 + 40.559 0.0 0.0 4.0989 4.0989 75.777 0.0 0.0 0.0 2.902759196213097 27.45998533299713 2.902759196213097 7.688684590960484 0 1.0 0.638272163982407 0.4838855026932703 0.6203715150305281 {[QS]|[NT]}S[R{I|L}][KG]QS;M[NG]ATEVR{I|L};{[QS]|[NT]}S[R{I|L}][VP]{[CT]|[{M(Oxidation (M))|F}G]};M[NG]ATE[R{I|L}]V;M{[QN]|[E{I|L}]|[KN]}TEVR{I|L};{[SA]|[TG]}GS[R{I|L}][KG]QS;M{[QN]|[E{I|L}]|[KN]}TE[R{I|L}]V;M[NG]A[{I|L}V]WTV;M[NG]A[{I|L}V]WS{I|L};{[MG]|[TS]}N[R{I|L}][KG]QS 4.0989;3.3219;2.8124;2.5052;2.1619;2.0405;1.3452;1.2967;1.2291;1.0055 -;-;-;-;-;-;-;-;-;- 865 1 1.759 155474.4 0.75 3953 4531 8476 HBL1_DMSO_200M_050219_2,8486 HBL1_DMSO_200M_050219_2,8486,SQSATEVRL True True SQSATEVRL 46.064666 495.765032947063 716702.8125 8476.0 ENSG00000151575|ENST00000696102|TEX9;;nc|ENSG00000151575|Q8N6V9-2|TEX9 5.3551201820373535 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8488 46.069 6.0 7898000.0 25 0 776190.0 + 3664 DAEMTTRMV 9 65 527.2378385896784 1052.4611242461567 2 527.2391845583916 MULTI CID FTMS 0 0 0 8487 8855801.0 0.1149472980236096 4 -0.1707916259765625 1 Unmodified _DAEMTTRMV_ ENSG00000205220|ENST00000358514|PSMB10 41.95555342248728 0.0647214845423414 4 {[DA]|[EG]}EMTTRMV 9 0 + 78.554 0.0 0.0 7.4639 7.4639 94.55 0.0 0.0 0.0 51.107150328368576 4.436974992327123 4.436974992327123 22.21848749616356 0 0.9247425010840048 2.0 0.4247425010840047 0.4247425010840047 + + {[DA]|[EG]}EMTTRMV;{[DA]|[EG]}E[W{M(Oxidation (M))|F}]RMV;[{M(Oxidation (M))|F}T]RTTM[C(Carbamidomethyl (C))H];[{M(Oxidation (M))|F}T]R[C(Carbamidomethyl (C))R]QW;[{M(Oxidation (M))|F}T]R[W{M(Oxidation (M))|F}][C(Carbamidomethyl (C))H];{[CT]|[{M(Oxidation (M))|F}G]}Q[C(Carbamidomethyl (C))R]RMV;[{M(Oxidation (M))|F}T]R[C(Carbamidomethyl (C))R][AG]W;{[CT]|[{M(Oxidation (M))|F}G]}[AG][C(Carbamidomethyl (C))R]RMV 7.4639;5.3528;4.193;2.1333;2.0884;1.5982;1.2467;0.71816 +;-;-;-;-;-;-;- + 87 + 1 1.753 40513.0 1.0 3954 4532 8487 HBL1_DMSO_200M_050219_2,8488 HBL1_DMSO_200M_050219_2,8488,DAEMTTRMV True True DAEMTTRMV 46.069041 527.239184558392 2203603200.0 8487.0 ENSG00000205220|ENST00000358514|PSMB10 6.584214846293132 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8489 46.07 20.0 2121400.0 25 0 232110.0 + 24996 MPPPPPQGV 9 67 460.23852327962805 918.462493626056 2 460.2401306033134 MULTI CID FTMS 0 0 0 8487 2091181.375 0.1128413654380093 74 -6.105567932128906 2 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 59.79521254764295 0.0261954583213598 4 {[HG]|PP}MPP[QP]GV 9 2 {[HG]|PP}MP + + 26.541 13.188 3.1236 2.8897 2.8897 45.694 0.0 0.0 0.0 0.0 13.353481135844874 0.0 0.0 0 1.0 0.0 0.0 0.75 {[HG]|PP}MPP[QP]GV 2.8897 - 134 + 1 1.753 38745.4 1.0 3955 4532 8487 HBL1_DMSO_200M_050219_2,8489 HBL1_DMSO_200M_050219_2,8489,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8490 46.072 70.0 788040.0 25 0 69147.0 + 18287 KVIGGFAGT 9 81 425.24462432821633 848.4746957232327 2 425.2449218630791 MULTI CID FTMS 0 0 0 8487 856671.8125 0.7212119761159601 2 -0.0453224182128906 3 Unmodified _KVIGGFAGT_ ENSG00000165948|ENST00000555523|IFI27L1 30.63653989081413 0.1413794767160703 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}AGT 8 2 + 24.153 0.0 0.0 2.8467 2.8467 67.558 0.0 0.0 0.0 0.3974237921339174 3.518258296924639 0.3974237921339174 3.518258296924639 0 0.5682503180159344 0.0 0.0 0.2887254899964357 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}AGT;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AGT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GG{M(Oxidation (M))|F}AGT;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[SA]|[TG]}[KC]T{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[KG]{I|L}GT;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[KG]{I|L}GT;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A{I|L}{[SA]|[TG]}{[QV]|[N{I|L}]|[RA]|[KV]} 2.8467;2.432;1.755;1.6765;1.4007;0.73005;0.63034;0.57686 -;-;+;-;-;-;-;- + 202 1 1.753 47912.9 1.0 3956 4532 8487 HBL1_DMSO_200M_050219_2,8490 HBL1_DMSO_200M_050219_2,8490,KVIGGFAGT False True KVIGGFAGT 46.071874 425.244921863079 18943204.0 8487.0 ENSG00000165948|ENST00000555523|IFI27L1 4.096091429392497 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8491 46.075 132.0 437480.0 25 0 76163.0 + -1 DFGCHSVMECW 11 71 693.7470077860607 1385.4794626389214 2 693.7487670779228 MULTI CID FTMS 0 0 0 8487 590544.0625 0.9128096140817236 1 -0.0350494384765625 4 Carbamidomethyl (C),Oxidation (M) _DFGCHSVM(Oxidation (M))EC(Carbamidomethyl (C))W_ REV__L1PA6_dup546|chr2:49227587-49231532:-|1.156546377819926|0.2927699401366612|1.98|48.0|121|1|anti-sense 1.3295316138638542 0.8688751186870782 4 V{M(Oxidation (M))|F}DASS 6 -1 43.321 0.0 0.0 3.1268 0.0 0.0 384.1541585391152 392.0734041803344 776.2275627194496 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 V{M(Oxidation (M))|F}DASS 3.1268 - 197 + 1 1.753 47217.2 1.0 3957 4532 8487 HBL1_DMSO_200M_050219_2,8491 HBL1_DMSO_200M_050219_2,8491,DFGCHSVMECW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8492 46.082 431.0 313910.0 25 0 15023.0 + 18392 KVTEGLTDV 9 150 481.26384345268445 960.5131339721688 2 481.2645141482353 MULTI CID FTMS 0 0 0 8487 157569.484375 1.0 0 0.0 5 Unmodified _KVTEGLTDV_ ENSG00000135316|ENST00000369622|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000271793|O60506-5|SYNCRIP 31.26834338654808 0.1333407332142048 4 {[TV]|[{I|L}S]}KW{I|L}TDV 8 3 {[TV]|[{I|L}S]}KW{I|L} + + 27.831 4.5758 0.72938 2.8975 2.8975 45.704 0.0 0.0 0.0 0.0 14.643127141856398 0.0 0.0 0 0.8494850021680094 0.0 0.2134679910804404 0.0 {[TV]|[{I|L}S]}KW{I|L}TDV 2.8975 - 488 + 1 1.753 107211.6 1.0 3958 4532 8487 HBL1_DMSO_200M_050219_2,8492 HBL1_DMSO_200M_050219_2,8492,KVTEGLTDV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8493 46.086 191.0 299030.0 25 0 15630.0 + 43439 WSIRRPTV 8 115 507.7956745344974 1013.5767961357948 2 507.7981140017509 MULTI CID FTMS 0 0 0 8487 153460.21875 0.4716952696448804 -4 0.2719497680664062 6 Unmodified _WSIRRPTV_ REV__ENSG00000136111|ENST00000377636|TBC1D4;REV__nc|ENSG00000136111|O60343-2|TBC1D4;REV__nc|ENSG00000136111|O60343-3|TBC1D4 36.04419817259434 0.3004715606373109 4 {I|L}{I|L}SPTV 6 -1 47.44 0.0 0.0 4.6805 0.0 0.0 385.1849080158154 0.0 385.1849080158154 0.0 29.676295438323592 0.0 0.0 0 0.9247425010840048 0.0 0.5796896906561032 0.0 {I|L}{I|L}SPTV 4.6805 - 215 + 1 1.753 50851.8 1.0 3959 4532 8487 HBL1_DMSO_200M_050219_2,8493 HBL1_DMSO_200M_050219_2,8493,WSIRRPTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8494 46.1 800.0 362150.0 25 0 26418.0 + 4082 DAMTRHLAV 9 298 338.51130030617185 1012.5120715187156 3 338.5110351443291 MULTI CID FTMS 0 0 0 8487 133808.359375 1.0 0 0.0 7 Unmodified _DAMTRHLAV_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;ENST00000461947.5_1_16:460332-462083:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 19.62595529434964 0.305431704817896 4 {[DA]|[EG]}{M(Oxidation (M))|F} 3 6 29.668 0.0 0.0 2.9301 0.0 0.0 0.0 676.3703418918263 676.3703418918263 15.71522411467761 0.0 0.0 0.0 0 0.1595680409956017 2.0 0.0 0.0 + {[DA]|[EG]}{M(Oxidation (M))|F} 2.9301 + + 617 + 1 1.753 225659.8 0.5600000023841858 3960 4532 8487 HBL1_DMSO_200M_050219_2,8494 HBL1_DMSO_200M_050219_2,8494,DAMTRHLAV False True DAMTRHLAV 46.09973 338.511035144329 914236.9375 8487.0 ENSG00000242612|ENST00000219481|DECR2;;ENST00000461947.5_1_16:460332-462083:+|nuORF;;ENST00000439661.5_1_16:457533-461575:+|nuORF;;nc|ENSG00000242612|Q9NUI1-3|DECR2 5.040309906005859 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8496 46.104 54.0 1077400.0 25 0 92806.0 + 25316 NAGPPSHII 9 92 453.2453106751012 904.4760684170024 2 453.2456848025322 MULTI CID FTMS 0 0 0 8495 1059305.875 0.9641869081383369 -1 0.0350494384765625 1 Unmodified _NAGPPSHII_ ENSG00000132128|ENST00000617190|LRRC41;nc|ENSG00000132128|Q15345-3|LRRC41 42.09456458481378 0.0639583784996157 4 {[QG]|[NA]}GP[PS]H{I|L}{I|L} 9 0 + 44.697 0.0 0.0 4.9418 4.9418 86.225 0.0 0.0 0.0 31.509560561028103 0.3880545010635572 0.3880545010635572 44.69714818727223 0 0.9247425010840048 2.0 0.0 0.0 + + {[QG]|[NA]}GP[PS]H{I|L}{I|L} 4.9418 + + 160 + 1 1.753 51084.1 1.0 3961 4533 8495 HBL1_DMSO_200M_050219_2,8496 HBL1_DMSO_200M_050219_2,8496,NAGPPSHII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8497 46.11 324.0 309970.0 25 0 31882.0 + -1 IGGVVLMK 8 116 416.7513259654405 831.488098997681 2 416.7517578005791 MULTI CID FTMS 0 0 0 8495 295332.40625 0.9177666580658144 -2 0.0832138061523437 2 Oxidation (M) _IGGVVLM(Oxidation (M))K_ REV__ENSG00000065427|ENST00000302445|KARS1;REV__nc|ENSG00000065427|Q15046-2|KARS1 14.581692164780916 0.6954967302934248 4 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]T{M(Oxidation (M))|F}K 7 -1 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]T + + 23.46 0.4306 0.079986 2.8215 2.8215 45.575 0.0 0.0 0.0 0.0 4.815286267955919 0.0 0.0 0 0.5 0.0 0.0 0.2887254899964357 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]T{M(Oxidation (M))|F}K 2.8215 - 276 + 1 1.753 82309.0 1.0 3962 4533 8495 HBL1_DMSO_200M_050219_2,8497 HBL1_DMSO_200M_050219_2,8497,IGGVVLMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8499 46.115 34.0 1793100.0 25 0 157350.0 + 39189 TYQKLARAL 9 75 532.3162622512605 1062.6179715693208 2 532.3166381716728 MULTI CID FTMS 0 0 0 8498 1613814.0 0.5585668996431371 -2 0.0453224182128906 1 Unmodified _TYQKLARAL_ ENSG00000269404|ENST00000595883|SPIB;nc|ENSG00000269404|Q01892-3|SPIB 29.081581746732265 0.1611639662936252 4 [YT]QK{I|L}A 6 3 54.896 0.0 0.0 5.1661 0.0 0.0 0.0 355.2104891412719 355.2104891412719 44.18243764792422 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.0 0.4247425010840047 + [YT]QK{I|L}A 5.1661 + + 75 + 1 1.749 52177.5 1.0 3963 4534 8498 HBL1_DMSO_200M_050219_2,8499 HBL1_DMSO_200M_050219_2,8499,TYQKLARAL False True TYQKLARAL 46.114511 532.316638171673 88225496.0 8498.0 ENSG00000269404|ENST00000595883|SPIB;;nc|ENSG00000269404|Q01892-3|SPIB 5.657726923624675 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8500 46.116 50.0 2240300.0 25 0 463570.0 + 39191 TYQKLARAL 9 80 355.21333972924526 1062.6181897879358 3 355.2131835818291 MULTI CID FTMS 0 0 0 8498 949128.4375 0.6968512222063553 -2 0.0453224182128906 2 Unmodified _TYQKLARAL_ ENSG00000269404|ENST00000595883|SPIB;nc|ENSG00000269404|Q01892-3|SPIB 14.838274106304384 0.4350285940865338 4 T[YQ]K{I|L}A 6 3 21.181 0.0 0.0 1.9932 0.0 0.0 0.0 355.21051965885005 355.21051965885005 10.99952405906418 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + T[YQ]K{I|L}A 1.9932 + + 38 + 1 1.749 98647.4 1.0 3964 4534 8498 HBL1_DMSO_200M_050219_2,8500 HBL1_DMSO_200M_050219_2,8500,TYQKLARAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8501 46.118 94.0 1086500.0 25 0 141120.0 + 13544 HPFFSRQKI 9 96 387.2168883196814 1158.6288355592442 3 387.2167541384697 MULTI CID FTMS 0 0 0 8498 447568.75 0.5848653880990335 -1 0.0102729797363281 3 Unmodified _HPFFSRQKI_ ENST00000558506.1_1_14:103801937-103802258:+|nuORF;ENST00000560763.5_2_14:103800597-103802258:+|nuORF 35.61225514009592 0.0995432151795903 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}PH{I|L} 9 7 + 44.456 0.0 0.0 3.8369 3.8369 78.08 0.0 0.0 0.0 7.156134043664508 11.349784198525969 7.156134043664508 9.436974992327125 0 0.4634679910804404 1.6989700043360187 0.3807196863200844 0.3494850021680094 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}PH{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H[VG][KQ]PH{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}R[KQ]PH{I|L};H{I|L}M{I|L}[KS][R{M(Oxidation (M))|F}]Q;H{I|L}M{I|L}[YN][KQ]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KS][KS]{I|L}{M(Oxidation (M))|F}C{I|L};H{I|L}P{M(Oxidation (M))|F}[KS][R{M(Oxidation (M))|F}]Q;HP{M(Oxidation (M))|F}{I|L}[KS][R{M(Oxidation (M))|F}]Q;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[VG][KQ]PH{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KS][KS]{M(Oxidation (M))|F}{I|L}C{I|L} 3.8369;3.0224;2.8694;2.3835;2.3768;2.2255;2.1016;2.0967;2.0747;1.9436 -;-;-;-;-;-;-;-;-;- 282 1 1.749 86843.9 1.0 3965 4534 8498 HBL1_DMSO_200M_050219_2,8501 HBL1_DMSO_200M_050219_2,8501,HPFFSRQKI True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8502 46.121 144.0 468240.0 25 0 36263.0 10015 FPLPWTPL 8 104 485.7717627007297 0 485.7732421755791 PEAK CID FTMS 0 0 0 8498 221898.078125 0.4594050753675925 -19 1.5703964233398438 4 Unmodified _FPLPWTPL_ ENST00000461547.5_1_20:56191111-56191654:-|nuORF 19.438996006549623 0.4285751805470146 4 PPQ 3 6 16.22 0.0 0.0 1.673 0.0 0.0 147.06607089225776 497.2839449518188 644.3500158440766 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PPQ 1.673 - 66 + 1 1.749 57840.5 1.0 3966 4534 8498 HBL1_DMSO_200M_050219_2,8502 HBL1_DMSO_200M_050219_2,8502,FPLPWTPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8503 46.129 490.0 201960.0 25 0 13137.0 + 4361 DATNMPAV 8 129 409.68934461354775 817.3641362938955 2 409.6889221072197 MULTI CID FTMS 0 0 0 8498 149282.421875 0.6914819201044293 1 -0.0471305847167968 5 Unmodified _DATNMPAV_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 63.562846038646086 0.116059504757595 4 {[DA]|[EG]}TNM 5 3 36.437 0.0 0.0 4.4578 0.0 0.0 0.0 282.14499501875804 282.14499501875804 22.45719564449472 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.9749073637206092 0.3054621874040891 + {[DA]|[EG]}TNM 4.4578 + + 89 1 1.749 76631.0 1.0 3967 4534 8498 HBL1_DMSO_200M_050219_2,8503 HBL1_DMSO_200M_050219_2,8503,DATNMPAV True True DATNMPAV 46.129392 409.68892210722 1453425.875 8498.0 nc|ENSG00000079459|P37268-4|FDFT1;;nc|ENSG00000079459|P37268-3|FDFT1;;nc|ENSG00000079459|P37268-5|FDFT1;;ENSG00000079459|ENST00000220584|FDFT1;;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;;nc|ENSG00000079459|P37268-2|FDFT1 5.122213363647461 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8504 46.143 800.0 83348.0 25 0 9247.6 -1 ITECMEAQNM 10 109 621.7428345856209 1241.4711162380418 2 621.7435790896416 MULTI CID FTMS 0 0 0 8498 133788.96875 1.0 0 0.0 6 Carbamidomethyl (C),Oxidation (M) _ITEC(Carbamidomethyl (C))M(Oxidation (M))EAQNM_ ENSG00000150712|ENST00000382142|MTMR12;nc|ENSG00000150712|Q9C0I1-2|MTMR12;nc|ENSG00000150712|Q9C0I1-3|MTMR12 13.90604991867851 0.6142120002215601 4 [{I|L}T]E{I|L} 4 -1 36.331 0.0 0.0 2.9264 0.0 0.0 0.0 782.1872471797011 782.1872471797011 17.926740567922437 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.3807196863200844 0.0 [{I|L}T]E{I|L} 2.9264 - 192 1 1.749 55123.7 0.8100000023841858 3968 4534 8498 HBL1_DMSO_200M_050219_2,8504 HBL1_DMSO_200M_050219_2,8504,ITECMEAQNM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8505 46.157 800.0 195610.0 25 0 16243.0 + -1 RFPDTVKQM 9 161 569.2890616800184 1136.5635704268368 2 569.2897216677666 MULTI CID FTMS 0 0 0 8498 109499.015625 0.3828857805607666 5 -0.4411087036132812 7 Oxidation (M) _RFPDTVKQM(Oxidation (M))_ ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;nc|ENSG00000185164|Q5JPE7|NOMO2 27.22323531849824 0.1848086127304535 4 [QP]S[KQ]{M(Oxidation (M))|F}KQ{M(Oxidation (M))|F} 9 -1 + 51.003 0.0 0.0 4.4875 4.4875 73.233 0.0 0.0 0.0 9.83140251491588 7.963385706725859 7.963385706725859 4.016061991826028 0 0.785666875892183 0.585026652029182 0.6203715150305281 0.0 [QP]S[KQ]{M(Oxidation (M))|F}KQ{M(Oxidation (M))|F};[QP]{M(Oxidation (M))|F}PV{M(Oxidation (M))|F}KQ{M(Oxidation (M))|F};[QP]S[KQ]{M(Oxidation (M))|F}K[AG]{M(Oxidation (M))|F};[QP]{M(Oxidation (M))|F}P{M(Oxidation (M))|F}VKQ{M(Oxidation (M))|F};[QP]SV[Y{I|L}]RQ{M(Oxidation (M))|F};{[ET]|[MV]}{[RE]|[WV]}TVKQ{M(Oxidation (M))|F};[QP][PA][HQ]GKQ{M(Oxidation (M))|F};[QP]{M(Oxidation (M))|F}PV{M(Oxidation (M))|F}K[AG]{M(Oxidation (M))|F};[QP]SVTE[KS]VY;[NP]T[KQ]{M(Oxidation (M))|F}KQ{M(Oxidation (M))|F} 4.4875;4.1341;3.6773;3.6554;3.5729;3.392;3.3762;3.324;3.3081;3.1782 -;-;-;-;-;-;-;-;-;- 845 1 1.749 120124.1 0.7400000095367432 3969 4534 8498 HBL1_DMSO_200M_050219_2,8505 HBL1_DMSO_200M_050219_2,8505,RFPDTVKQM False False RFPDTVKQM 46.157065 569.289721667767 2338480.0 8498.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 2.8173603216807046 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8507 46.161 17.0 4339500.0 25 0 713490.0 + 13523 HNGMLINKLY 10 52 601.8237287449131 1201.632904556626 2 601.8242065310478 MULTI CID FTMS 0 0 0 8506 3478651.5 0.9876552025385764 2 -0.1955795288085937 1 Unmodified _HNGMLINKLY_ REV__ENSG00000143498|ENST00000352967|TAF1A;REV__nc|ENSG00000143498|Q15573-2|TAF1A 1.6526216038709556 0.7189921496796233 4 {I|L}PN 3 -1 18.94 0.0 0.0 1.5762 0.0 0.0 97.97536525680046 776.4710787408811 874.4464439976816 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}PN 1.5762 - 7 + 1 1.749 58501.7 1.0 3970 4535 8506 HBL1_DMSO_200M_050219_2,8507 HBL1_DMSO_200M_050219_2,8507,HNGMLINKLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8508 46.163 39.0 2104700.0 25 0 447820.0 + 22616 LPYLHSNKCK 10 64 401.5515109185615 1201.6327033558844 3 401.5515930056572 MULTI CID FTMS 0 0 0 8506 1583400.625 0.962477948161216 2 -0.1955795288085937 2 Unmodified _LPYLHSNKCK_ REV__ENSG00000005108|ENST00000423059|THSD7A 6.723162845929126 0.6955379296933136 4 {I|L}{I|L} 2 -1 17.959 0.0 0.0 1.4945 0.0 0.0 0.0 972.4440648903752 972.4440648903752 7.245462655597095 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 1.4945 - 11 + 1 1.749 66628.4 1.0 3971 4535 8506 HBL1_DMSO_200M_050219_2,8508 HBL1_DMSO_200M_050219_2,8508,LPYLHSNKCK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8509 46.165 132.0 1036300.0 25 0 199450.0 -1 0 87 966.4323678807548 1930.8501828283097 2 966.4342529177666 MULTI CID FTMS 0 0 0 8506 818035.3125 0.5719239831876989 -5 0.2041587829589843 3 4 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L}PE{I|L} 9 -1 25.887 0.0 0.0 1.3407 0.0 0.0 0.0 962.3220205570784 962.3220205570784 9.689418917016829 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.6307196863200843 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L}PE{I|L} 1.3407 - 1046 1 1.749 98020.9 1.0 3972 4535 8506 HBL1_DMSO_200M_050219_2,8509 HBL1_DMSO_200M_050219_2,8509, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8510 46.167 63.0 635750.0 25 0 24476.0 + 18244 KVIDPATATSV 11 82 551.3112169274885 1100.607880921777 2 551.3126708865166 MULTI CID FTMS 0 0 0 8506 731831.375 0.2931698421365308 7 -0.7015914916992188 4 Unmodified _KVIDPATATSV_ ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4 37.07464296494664 0.257459615863268 4 TATW 4 8 37.894 0.0 0.0 3.443 0.0 0.0 623.3666859357437 0.0 623.3666859357437 0.0 18.63621890751531 0.0 0.0 0 0.8252574989159953 0.0 1.0 0.0 TATW 3.443 - 114 1 1.749 38844.1 1.0 3973 4535 8506 HBL1_DMSO_200M_050219_2,8510 HBL1_DMSO_200M_050219_2,8510,KVIDPATATSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8511 46.172 256.0 350220.0 25 0 44933.0 + 13583 HPLPEVAHV 9 130 499.77565564612615 997.5367583590524 2 499.7744933962822 MULTI CID FTMS 0 0 0 8506 350081.46875 0.7812018923001182 6 -0.6220550537109375 5 Unmodified _HPLPEVAHV_ ENSG00000131143|ENST00000253452|COX4I1;ENST00000567266.5_1_16:85833348-85838718:+|nuORF;ENST00000569997.1_1_16:85838427-85838718:+|nuORF 77.98433622928108 0.0180125044636492 4 [{I|L}P]H[EP]VAHV 9 2 + 58.557 0.0 0.0 5.8701 5.8701 86.695 0.0 0.0 0.0 12.877378301856588 12.877378301856588 12.877378301856588 10.726052125589971 0 2.0356668758921828 1.5228787452803376 0.6861818737241735 0.0 [{I|L}P]H[EP]VAHV;[{I|L}P]{[DA]|[EG]}{I|L}YAHV;HP{I|L}[EP]VAHV;[{I|L}P]DA{I|L}PHHV;[{I|L}P]HDA[{I|L}P]HV;HP{I|L}D[{I|L}P]AHV;[{I|L}P]DAH[{I|L}P]HV;{[CP]|[EA]}AS[KS]VAHV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}W[{I|L}P]HV;{[DA]|[EG]}[{I|L}P]{I|L}YAHV 5.8701;4.7949;4.5792;4.3127;4.2252;3.8958;3.8837;3.7599;3.6226;3.474 -;-;+;-;-;-;-;-;-;- + 724 1 1.749 75926.1 1.0 3974 4535 8506 HBL1_DMSO_200M_050219_2,8511 HBL1_DMSO_200M_050219_2,8511,HPLPEVAHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8512 46.186 800.0 382490.0 25 0 45431.0 + 3253 AYGLSREV 8 174 447.7372684472624 893.4599839613248 2 447.7378723025322 MULTI CID FTMS 0 0 0 8506 246776.0 0.0687401152971311 -3 0.0924530029296875 6 Unmodified _AYGLSREV_ ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 49.93300154707207 0.1395624531867191 4 AYG{I|L}RDTV 8 3 + 69.507 0.0 0.0 7.7795 7.7795 78.139 0.0 0.0 0.0 34.90463059526342 1.7609125905568137 1.7609125905568137 0.282478101020132 0 1.242992819099939 2.0 0.6022338482433752 0.3252574989159953 AYG{I|L}RDTV;AYG{I|L}SREV;AYG{I|L}RDS{I|L};AYG{I|L}SRD{I|L};AYVASREV;AYVASRD{I|L};AYVA[RD]TV;AYVA[RD]S{I|L};AYG{I|L}SR{I|L}D;AYG{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L} 7.7795;7.7479;7.5824;7.5508;7.3267;7.1296;7.0021;6.8051;6.7963;6.5015 -;+;-;-;-;-;-;-;-;- + 306 + 1 1.749 234832.6 0.9100000262260436 3975 4535 8506 HBL1_DMSO_200M_050219_2,8512 HBL1_DMSO_200M_050219_2,8512,AYGLSREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8513 46.19 245.0 307380.0 25 0 18829.0 8775 EVTHLHQT 8 119 482.74558725473855 963.4766215762772 2 482.7456848025322 MULTI CID FTMS 0 0 0 8506 186624.09375 0.9787384750403678 -1 0.0471305847167968 7 Unmodified _EVTHLHQT_ ENSG00000125378|ENST00000245451|BMP4 19.438996006549623 0.6237395211498085 4 {NN|[MP]|[D{I|L}]|[EV]}T[KG]{I|L}A[C(Carbamidomethyl (C))S] 9 5 + 26.563 0.0 0.0 2.757 2.757 64.507 0.0 0.0 0.0 1.9504625720438893 3.123468415207501 1.9504625720438893 1.9504625720438893 0 0.0 1.3979400086720375 0.3252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}T[KG]{I|L}A[C(Carbamidomethyl (C))S];{[ET]|[MV]}V[KG]{I|L}A[C(Carbamidomethyl (C))S];{[TV]|[{I|L}S]}E[KG]{I|L}A[C(Carbamidomethyl (C))S];{[ET]|[MV]}[RK]{I|L}A[C(Carbamidomethyl (C))S];{[TV]|[{I|L}S]}[WK]{I|L}A[C(Carbamidomethyl (C))S];[{I|L}T]D[KG]{I|L}A[C(Carbamidomethyl (C))S] 2.757;2.5546;2.5254;1.8571;1.8279;1.0454 -;-;-;-;-;- 398 1 1.749 62630.0 1.0 3976 4535 8506 HBL1_DMSO_200M_050219_2,8513 HBL1_DMSO_200M_050219_2,8513,EVTHLHQT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8514 46.204 800.0 152690.0 25 0 22699.0 -1 0 54 1069.105775968252 3204.2954985049564 3 1069.775561511517 MULTI CID FTMS 0 0 0 8506 169566.984375 0.341233943767064 -3 0.0924530029296875 8 4 GY[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]YGYW 8 -1 18.594 0.0 0.0 0.58027 0.0 0.0 1254.4205728231193 850.440795347312 2104.8613681704314 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GY[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]YGYW 0.58027 - 30 + 1 1.749 103815.2 0.6600000262260437 3977 4535 8506 HBL1_DMSO_200M_050219_2,8514 HBL1_DMSO_200M_050219_2,8514, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8515 46.218 800.0 146520.0 25 0 13316.0 + 4362 DATNMPAV 8 100 818.3706319816017 817.3633555150017 1 820.3749267458916 MULTI CID FTMS 0 0 0 8506 160896.984375 0.8651149485400029 1 -0.078338623046875 9 Unmodified _DATNMPAV_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 28.486842064014134 0.4448922141344407 4 {[DA]|[EG]}TNMVAP 8 2 + 51.508 0.0 0.0 6.3017 6.3017 83.849 0.0 0.0 0.0 6.722448091210964 16.40978057358332 6.722448091210964 6.722448091210964 0 0.7742275032520141 0.0 1.079689690656103 0.805462187404089 {[DA]|[EG]}TNMVAP;{[QS]|[NT]}{[DA]|[EG]}MVAP;{[QS]|[NT]}M{[MG]|[TS]}PAP;{[DA]|[EG]}TGGMVAP;{[QS]|[NT]}M{[DA]|[EG]}VAP;[MN]T{[MG]|[TS]}PAP;[MN]T{[DA]|[EG]}VAP;[VS]VMY[YG];[VS]VM[PG][DN];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CT]|[{M(Oxidation (M))|F}G]}[YT]P 6.3017;5.4792;4.4696;4.1831;3.6721;3.2368;2.4393;1.951;1.5795;0.28041 -;-;-;-;-;-;-;-;-;- 245 1 1.749 83989.0 0.7200000286102295 3978 4535 8506 HBL1_DMSO_200M_050219_2,8515 HBL1_DMSO_200M_050219_2,8515,DATNMPAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8516 46.232 800.0 325860.0 25 0 14627.0 + 32122 RVNKAFVNV 9 208 523.8092741796419 0 523.8115112185478 PEAK CID FTMS 0 0 0 8506 133454.953125 0.1879045634773444 -2 0.057403564453125 10 Unmodified _RVNKAFVNV_ ENSG00000176731|ENST00000619594|RBIS 61.357469665136826 0.0154611170783358 4 DV{M(Oxidation (M))|F}AKR 6 7 39.302 0.0 0.0 3.7588 0.0 0.0 116.09264080939528 210.08899866275627 326.1816394721516 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.3807196863200844 0.3252574989159953 DV{M(Oxidation (M))|F}AKR 3.7588 - 806 + 1 1.749 205731.4 0.7599999904632568 3979 4535 8506 HBL1_DMSO_200M_050219_2,8516 HBL1_DMSO_200M_050219_2,8516,RVNKAFVNV True True RVNKAFVNV 46.231619 523.811511218548 5484970.5 8506.0 ENSG00000176731|ENST00000619594|RBIS 3.5462608337402344 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8517 46.235 106.0 426040.0 25 0 39928.0 + 29939 QSLKLDTSV 9 74 495.7773206442497 989.5400883552994 2 495.7803527712822 MULTI CID FTMS 0 0 0 8506 109921.53125 0.250617425656878 -2 0.057403564453125 11 Unmodified _QSLKLDTSV_ ENSG00000120318|ENST00000239440|ARAP3;nc|ENSG00000120318|Q8WWN8-2|ARAP3 14.838274106304384 0.4350285940865338 4 SV 2 7 24.024 0.0 0.0 2.4278 0.0 0.0 785.4286209254151 0.0 785.4286209254151 0.0 9.330984399557424 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + SV 2.4278 + + 80 + 1 1.749 41576.5 1.0 3980 4535 8506 HBL1_DMSO_200M_050219_2,8517 HBL1_DMSO_200M_050219_2,8517,QSLKLDTSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8519 46.24 23.0 1778200.0 25 0 217400.0 + 3790 DAHSNLASI 9 69 464.2298611478968 926.4451693625936 2 464.2302734255791 MULTI CID FTMS 0 0 0 8518 2718902.25 1.0 0 0.0 1 Unmodified _DAHSNLASI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 49.93300154707207 0.0405168250806675 4 SN{I|L}A{[TV]|[{I|L}S]} 6 3 45.718 0.0 0.0 4.9348 0.0 0.0 323.12300307441564 0.0 323.12300307441564 0.0 16.214693850147906 0.0 0.0 0 0.5 0.0 1.2302046884880935 0.0 + SN{I|L}A{[TV]|[{I|L}S]} 4.9348 + + 90 1 1.749 35955.3 1.0 3981 4536 8518 HBL1_DMSO_200M_050219_2,8519 HBL1_DMSO_200M_050219_2,8519,DAHSNLASI True True DAHSNLASI 46.239833 464.230273425579 43905652.0 8518.0 nc|ENSG00000147162|O15294-3|OGT;;ENSG00000147162|ENST00000373719|OGT;;nc|ENSG00000147162|O15294-4|OGT;;nc|ENSG00000147162|O15294-2|OGT 6.978506882985433 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8520 46.242 107.0 334060.0 25 0 20665.0 + 16331 IYHNPTANSF 10 73 582.2772613445146 1162.5399697558291 2 582.2775146365166 MULTI CID FTMS 0 0 0 8518 394300.15625 0.386029852686054 4 -0.4319419860839844 2 Unmodified _IYHNPTANSF_ ENSG00000125753|ENST00000245932|VASP;ENST00000586619.1_1_19:46010999-46025451:+|nuORF 29.081581746732265 0.3152867722954398 4 Q{I|L}TT[QT]S{M(Oxidation (M))|F} 8 7 36.151 0.0 0.0 3.1097 0.0 0.0 238.08569837086665 0.0 238.08569837086665 0.0 13.607371895881602 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.0 Q{I|L}TT[QT]S{M(Oxidation (M))|F} 3.1097 - 202 + 1 1.749 32525.2 1.0 3982 4536 8518 HBL1_DMSO_200M_050219_2,8520 HBL1_DMSO_200M_050219_2,8520,IYHNPTANSF False True IYHNPTANSF 46.242112 582.277514636517 20137706.0 8518.0 ENST00000586619.1_1_19:46010999-46025451:+|nuORF;;ENSG00000125753|ENST00000245932|VASP 6.852224826812744 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8521 46.243 20.0 2840100.0 25 0 350290.0 + 3587 DAAISKVQV 9 77 465.76613376263856 929.5177145920773 2 465.7664672732353 MULTI CID FTMS 0 0 0 8518 3122171.75 0.8365575780927215 -1 0.078338623046875 3 Unmodified _DAAISKVQV_ ENSG00000127481|ENST00000375254|UBR4;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4 51.629811660486645 0.0367964933207742 4 {[DA]|[EG]}A{I|L}SKVQV 9 0 + 74.637 0.0 0.0 8.0296 8.0296 93.962 0.0 0.0 0.0 23.672137691284405 13.389852215477518 13.389852215477518 12.26280941356464 0 1.3494850021680094 1.6989700043360187 0.0 0.6861818737241735 + + {[DA]|[EG]}A{I|L}SKVQV;{[DA]|[EG]}A{I|L}SKV[AG]V;[R{M(Oxidation (M))|F}][PG]KVQV;[R{M(Oxidation (M))|F}][RK]PQV;[R{M(Oxidation (M))|F}][PG]KV[AG]V 8.0296;6.7103;1.6262;0.54078;0.30117 +;-;-;-;- + 355 + 1 1.749 49238.3 1.0 3983 4536 8518 HBL1_DMSO_200M_050219_2,8521 HBL1_DMSO_200M_050219_2,8521,DAAISKVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8522 46.246 136.0 790990.0 25 0 109070.0 + 15357 IPMKIRNV 8 115 324.2004475328731 969.5795131988192 3 324.2003661990166 MULTI CID FTMS 0 0 0 8518 449305.5 0.6509464586611772 -2 0.1254692077636718 4 Unmodified _IPMKIRNV_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 18.1463463914782 0.6428359029697936 4 {I|L}VEK{I|L} 5 5 40.261 0.0 0.0 4.1524 0.0 0.0 0.0 384.1996248834594 384.1996248834594 25.568109453757657 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {I|L}VEK{I|L} 4.1524 - 73 + 1 1.749 92907.1 1.0 3984 4536 8518 HBL1_DMSO_200M_050219_2,8522 HBL1_DMSO_200M_050219_2,8522,IPMKIRNV False True IPMKIRNV 46.246044 324.200366199017 15978450.0 8518.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-3|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;nc|ENSG00000006744|Q9BQ52-2|ELAC2 4.908138593037923 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8523 46.25 201.0 551890.0 25 0 69385.0 + 15538 IPVSRSPL 8 110 434.76587112779487 867.5171893223898 2 434.7661620974541 MULTI CID FTMS 0 0 0 8518 399170.0625 0.6692561700108582 -4 0.1707916259765625 5 Unmodified _IPVSRSPL_ REV__ENST00000378302.6_1_13:50134118-50140783:-|nuORF 34.10243960390752 0.3329570729325616 4 {I|L}PPS[RV]S{I|L} 8 -1 + 56.001 0.0 0.0 6.4553 6.4553 77.49 0.0 0.0 0.0 41.091923173034665 1.3920077026726505 1.3920077026726505 1.9629464514396844 0 0.3807196863200844 2.0 0.1923877696554315 0.3807196863200844 {I|L}PPS[RV]S{I|L};{I|L}PPS[RV]TV 6.4553;6.2291 -;- 222 + 1 1.749 90212.5 1.0 3985 4536 8518 HBL1_DMSO_200M_050219_2,8523 HBL1_DMSO_200M_050219_2,8523,IPVSRSPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8524 46.252 123.0 380530.0 25 0 26986.0 + 2495 AQYENPPHI 9 81 534.757723420009 1067.500893906818 2 534.7582885622978 MULTI CID FTMS 0 0 0 8518 297118.6875 0.8085217004419581 -1 0.078338623046875 6 Unmodified _AQYENPPHI_ ENSG00000142347|ENST00000644032|MYO1F;ENSG00000157483|ENST00000288235|MYO1E;ENST00000594774.5_1_19:8618146-8642307:-|nuORF;ENST00000594977.5_1_19:8612968-8642307:-|nuORF;ENST00000595325.5_1_19:8616850-8642307:-|nuORF 36.12702656103203 0.0967173616627612 4 [QA]YENPPH{I|L} 9 0 + 49.816 0.0 0.0 4.6666 4.6666 77.23 0.0 0.0 0.0 27.139764356889188 8.65101933905737 8.65101933905737 6.7609125905568135 0 0.805462187404089 0.0 0.0 0.2887254899964357 + + [QA]YENPPH{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QC]|[C(Carbamidomethyl (C))A]}NPPH{I|L};[QA]YEGGPPH{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[C(Carbamidomethyl (C))N]APPH{I|L};[QA]Y[DG]APPH{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QC]|[C(Carbamidomethyl (C))A]}GGPPH{I|L};[WQ]{M(Oxidation (M))|F}[SG]PPH{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NS][SG]PPH{I|L};[QA]YEN[{I|L}T]{[ET]|[MV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QC]|[C(Carbamidomethyl (C))A]}N[{I|L}T]{[ET]|[MV]} 4.6666;4.0332;3.5335;3.4808;3.2515;2.9002;2.6182;2.6182;2.0516;1.4182 +;-;-;-;-;-;-;-;-;- + 209 + 1 1.749 43424.9 1.0 3986 4536 8518 HBL1_DMSO_200M_050219_2,8524 HBL1_DMSO_200M_050219_2,8524,AQYENPPHI True True AQYENPPHI 46.252423 534.758288562298 3646520.5 8518.0 ENST00000595325.5_1_19:8616850-8642307:-|nuORF;;ENSG00000142347|ENST00000644032|MYO1F;;ENST00000594774.5_1_19:8618146-8642307:-|nuORF;;ENSG00000157483|ENST00000288235|MYO1E;;ENST00000594977.5_1_19:8612968-8642307:-|nuORF 8.613920211791992 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8525 46.255 154.0 280830.0 25 0 23660.0 + 39177 TYPSQAPVY 9 74 513.2498994761708 1024.4852460191414 2 513.2502929568291 MULTI CID FTMS 0 0 0 8518 272479.75 0.7271552456724792 -2 0.1254692077636718 7 Unmodified _TYPSQAPVY_ ENSG00000136738|ENST00000377524|STAM 16.942295170755138 0.3780752226737986 4 [YT]{I|L} 3 7 28.429 0.0 0.0 2.7749 0.0 0.0 0.0 644.2679663162695 644.2679663162695 7.776428057751659 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [YT]{I|L} 2.7749 - 163 1 1.749 41433.6 1.0 3987 4536 8518 HBL1_DMSO_200M_050219_2,8525 HBL1_DMSO_200M_050219_2,8525,TYPSQAPVY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8526 46.26 264.0 409940.0 25 0 26538.0 + 22461 LPVAVKHVV 9 120 481.3135913788643 960.6126298245288 2 481.3133422732353 MULTI CID FTMS 0 0 0 8518 235700.140625 0.3042515522773915 -2 0.1254692077636718 8 Unmodified _LPVAVKHVV_ ENSG00000198355|ENST00000360612|PIM3 57.47134341890925 0.0274820932774257 4 {I|L}PVAVKHVV 9 0 + 67.01 0.0 0.0 6.9757 6.9757 92.455 0.0 0.0 0.0 28.88312609025668 14.106829096975275 14.106829096975275 16.659554148008333 0 1.066901560044258 1.6989700043360187 0.0 0.0 + + {I|L}PVAVKHVV;{I|L}PVAVKVVH;{I|L}VPAVKHVV;{I|L}VPAVKVVH;[HV]K{[VA]|[{I|L}G]}VP{I|L}V;[{I|L}P]KAA[H{I|L}]{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}H{[VA]|[{I|L}G]}VP{I|L}V;{I|L}P[R{I|L}]VVP[PA] 6.9757;5.2415;4.9408;3.2065;3.1588;2.9077;2.4436;2.143 +;-;-;-;-;-;-;- + 623 + 1 1.749 90934.9 1.0 3988 4536 8518 HBL1_DMSO_200M_050219_2,8526 HBL1_DMSO_200M_050219_2,8526,LPVAVKHVV True True LPVAVKHVV 46.260365 481.313342273235 12326462.0 8518.0 ENSG00000198355|ENST00000360612|PIM3 6.3774590492248535 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8527 46.266 288.0 612640.0 25 0 68656.0 + 22270 LPRRELRIV 9 104 384.5836820243276 1150.729216673183 3 384.5840942263603 MULTI CID FTMS 0 0 0 8518 187863.703125 0.5144937725564569 -1 0.078338623046875 9 Unmodified _LPRRELRIV_ REV__nc|ENSG00000177301|P16389-2|KCNA2 3.876331618118854 0.779363392565652 4 V 1 -1 11.259 0.0 0.0 0.97843 0.0 0.0 1033.6499224000368 0.0 1033.6499224000368 0.0 4.805409669848153 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.97843 + + 9 + 1 1.749 143264.5 1.0 3989 4536 8518 HBL1_DMSO_200M_050219_2,8527 HBL1_DMSO_200M_050219_2,8527,LPRRELRIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8528 46.275 526.0 488820.0 25 0 31635.0 + 36481 TADASTYSSVT 11 234 368.1683440049303 1101.483202614991 3 368.1687805056572 MULTI CID FTMS 0 0 0 8518 182939.171875 0.0291069426235507 -3 0.1357421875 10 Unmodified _TADASTYSSVT_ REV__ENSG00000034971|ENST00000037502|MYOC 15.248480904072842 0.7179608125786238 4 [TA]ADY{I|L}V 7 -1 63.223 0.0 0.0 5.7398 0.0 0.0 0.0 365.09140955142817 365.09140955142817 51.16248266068967 0.0 0.0 0.0 0 1.1496498648046138 2.0 0.0 0.0 [TA]ADY{I|L}V 5.7398 - 591 + 1 1.749 205518.7 1.0 3990 4536 8518 HBL1_DMSO_200M_050219_2,8528 HBL1_DMSO_200M_050219_2,8528,TADASTYSSVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8529 46.289 800.0 371230.0 25 0 24666.0 + + 45497 EGYLQKAKI 9 232 350.53775222557306 1048.5914272769191 3 350.5374938845634 MULTI CID FTMS 0 0 0 8518 162113.6875 0.7003802406624753 -1 0.078338623046875 11 Unmodified _YTPTLVVTR_ ENSG00000075884|ENST00000295095|ARHGAP15;ENST00000552641.5_1_2:143913059-144194625:+|nuORF 21.74664581756881 0.2544899275067181 4 EVAYQ[KA]K{I|L} 9 -1 + 28.272 0.0 0.0 2.6962 2.6962 65.912 0.0 0.0 0.0 15.173395149666604 5.86365002801444 5.86365002801444 2.971713920767012 0 -0.0096881472480041 0.1307682802690238 0.0 0.5 EVAYQ[KA]K{I|L};E[YG]{I|L}Q[KA]K{I|L};[W{I|L}]Y{I|L}[DV]K{I|L};[WY]{I|L}{I|L}[DV]K{I|L};EVAYQ[KA]{I|L}K;E[YG]{I|L}Q[KA]{I|L}K;[W{I|L}]Y{I|L}[DV]{I|L}K;[WY]{I|L}{I|L}[DV]{I|L}K;EVAYQ[K{I|L}]AK;EVAY{I|L}[R{I|L}]SV 2.6962;2.4128;2.2329;2.065;1.9095;1.6261;1.4462;1.2782;1.1061;0.83839 -;-;-;-;-;-;-;-;-;- 297 + 1 1.749 233187.9 0.5899999737739563 3991 4536 8518 HBL1_DMSO_200M_050219_2,8529 HBL1_DMSO_200M_050219_2,8529,YTPTLVVTR False False EGYLQKAKI 46.28871 350.537493884563 1642540.25 8518.0 ENSG00000075884|ENST00000295095|ARHGAP15;;ENST00000552641.5_1_2:143913059-144194625:+|nuORF 3.1872166792551675 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8530 46.296 407.0 153100.0 25 0 20427.0 -1 DFVCPICFDMI 11 88 688.2902888938114 1374.5660248544227 2 688.2916747927666 MULTI CID FTMS 0 0 0 8518 160112.4375 0.6983555598384605 -1 0.078338623046875 12 Carbamidomethyl (C),Oxidation (M) _DFVC(Carbamidomethyl (C))PICFDM(Oxidation (M))I_ ENSG00000143207|ENST00000367669|COP1;nc|ENSG00000143207|Q8NHY2-2|COP1;nc|ENSG00000143207|Q8NHY2-4|COP1;nc|ENSG00000143207|Q8NHY2-5|COP1 3.2813086475875832 0.8596665074481906 4 T{I|L}AGT{[QN]|[E{I|L}]|[KN]} 7 -1 25.354 0.0 0.0 1.8445 0.0 0.0 671.2124752001115 0.0 671.2124752001115 0.0 11.401698116058226 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 T{I|L}AGT{[QN]|[E{I|L}]|[KN]} 1.8445 - 304 + 1 1.749 52526.7 1.0 3992 4536 8518 HBL1_DMSO_200M_050219_2,8530 HBL1_DMSO_200M_050219_2,8530,DFVCPICFDMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8531 46.31 800.0 265820.0 25 0 57228.0 -1 0 79 1121.131510485241 3360.372702055924 3 1121.801196277142 MULTI CID FTMS 0 0 0 8518 159579.546875 0.1910577715540354 -2 0.1254692077636718 13 4 AHVVQ 5 -1 33.025 0.0 0.0 0.98279 0.0 0.0 2256.760471686586 566.2927950494749 2823.053266736061 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.8243923658886183 AHVVQ 0.98279 - 1059 + 1 1.749 161425.8 0.5699999928474426 3993 4536 8518 HBL1_DMSO_200M_050219_2,8531 HBL1_DMSO_200M_050219_2,8531, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8532 46.325 800.0 99302.0 25 0 5608.2 + 13972 HYTQKSLSL 9 145 538.79056026255 1075.5665675919 2 538.7913085818291 MULTI CID FTMS 0 0 0 8518 150054.421875 0.3668586067469709 5 -0.5437164306640625 14 Unmodified _HYTQKSLSL_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1 31.26834338654808 0.1333407332142048 4 {[WN]|[YH]}[QT]K 5 4 25.062 0.0 0.0 2.3301 0.0 0.0 0.0 415.2159565902 415.2159565902 6.376043404367451 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.0 0.0 + {[WN]|[YH]}[QT]K 2.3301 + + 242 1 1.749 65564.7 0.7300000190734863 3994 4536 8518 HBL1_DMSO_200M_050219_2,8532 HBL1_DMSO_200M_050219_2,8532,HYTQKSLSL False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 8533 46.339 800.0 196230.0 25 0 18003.0 + 33687 SIYNGDMEKI 10 142 593.2747657825372 1184.5349786318743 2 593.2739135622978 MULTI CID FTMS 0 0 0 8518 130033.734375 0.8175655344062079 -2 0.1254692077636718 15 Oxidation (M) _SIYNGDM(Oxidation (M))EKI_ ENSG00000176171|ENST00000368636|BNIP3;ENST00000550043.1_1_14:28733783-28734191:+|nuORF 49.52724829834842 0.0829255630816734 4 {[TV]|[{I|L}S]}YNDG{M(Oxidation (M))|F}EK{I|L} 10 2 + 75.619 0.0 0.0 6.3839 6.3839 80.733 0.0 0.0 0.0 10.83877649506033 7.211634584553565 7.211634584553565 3.953098790663432 0 0.7742275032520141 2.0 0.9119543704721594 0.6861818737241735 {[TV]|[{I|L}S]}YNDG{M(Oxidation (M))|F}EK{I|L};{[TV]|[{I|L}S]}YNDG{M(Oxidation (M))|F}G{I|L}S{I|L};{[TV]|[{I|L}S]}YNDG{M(Oxidation (M))|F}G{I|L}TV;{[TV]|[{I|L}S]}YGGDG{M(Oxidation (M))|F}EK{I|L};{[TV]|[{I|L}S]}YNGD{M(Oxidation (M))|F}EK{I|L};{[TV]|[{I|L}S]}Y[TA]GDNV[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}YNGD{M(Oxidation (M))|F}G{I|L}S{I|L};{[TV]|[{I|L}S]}YNDG[RH][HS];{[TV]|[{I|L}S]}YNGD{M(Oxidation (M))|F}G{I|L}TV;{[TV]|[{I|L}S]}YNDG[TA][MT]{I|L} 6.3839;6.0502;5.7751;5.6102;5.601;5.4689;5.2673;5.0958;4.9922;4.9421 -;-;-;-;+;-;-;-;-;- + 526 + 1 1.749 117485.3 0.6200000047683716 3995 4536 8518 HBL1_DMSO_200M_050219_2,8533 HBL1_DMSO_200M_050219_2,8533,SIYNGDMEKI True False SIYNGDMEKI 46.338689 593.273913562298 1812967.625 8518.0 ENST00000550043.1_1_14:28733783-28734191:+|nuORF;;ENSG00000176171|ENST00000368636|BNIP3 3.568393607934316 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8534 46.353 800.0 226240.0 25 0 13942.0 + + -1 DAPEQRVTL 9 196 515.2530583560914 1028.4915637789827 2 515.2525512576103 MULTI CID FTMS 0 0 0 8518 111230.328125 0.2470382612648722 5 -0.5437164306640625 16 Oxidation (M) _TPVHSAM(Oxidation (M))GTL_ ENSG00000176678|ENST00000320241|FOXL1 13.90604991867851 0.6142120002215601 4 {[DA]|[EG]}{M(Oxidation (M))|F} 3 -1 17.932 0.0 0.0 1.7435 0.0 0.0 0.0 692.3351666444702 692.3351666444702 2.152230767993723 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F} 1.7435 - 873 1 1.749 141944.9 0.5799999833106995 3996 4536 8518 HBL1_DMSO_200M_050219_2,8534 HBL1_DMSO_200M_050219_2,8534,TPVHSAMGTL False False DAPEQRVTL 46.35252 515.2528 1900490.125 8518.0 ENSG00000176678|ENST00000320241|FOXL1 5.033621470133464 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8536 46.357 6.1 6417300.0 25 0 747430.0 + 41519 VPNNKITVV 9 62 492.2974984222936 982.5804439113872 2 492.2979614138603 MULTI CID FTMS 0 0 0 8535 8782153.0 0.1769037753693965 9 -0.8894805908203125 1 Unmodified _VPNNKITVV_ ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 34.40172386719151 0.1061884637610825 4 VPN 3 6 35.713 0.0 0.0 3.6346 0.0 0.0 0.0 669.3953951471311 669.3953951471311 5.435595997417977 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.0 0.0 + VPN 3.6346 + + 65 + 1 1.747 39256.7 1.0 3997 4537 8535 HBL1_DMSO_200M_050219_2,8536 HBL1_DMSO_200M_050219_2,8536,VPNNKITVV True True VPNNKITVV 46.357072 492.29796141386 1971607680.0 8535.0 ENSG00000111716|ENST00000350669|LDHB;;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 6.860428015391032 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8537 46.358 28.0 1464000.0 25 0 106010.0 + 30119 QVISQAAVVHA 11 71 561.8160403073024 1121.617527681405 2 561.8170043826103 MULTI CID FTMS 0 0 0 8535 1635430.375 0.4900890221453702 2 -0.1983985900878906 2 Unmodified _QVISQAAVVHA_ ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1;nc|ENSG00000176623|Q96DB5-3|RMDN1 75.76082778847304 0.0157096510099958 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SQAAVV[HA] 11 0 + 82.823 0.0 0.0 7.3843 7.3843 92.672 0.0 0.0 0.0 58.87827237252243 7.367585652254192 7.367585652254192 12.6233482644911 0 1.0356668758921828 1.6989700043360187 0.0 0.3494850021680094 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SQAAVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S[AG]AAVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SQ[Q{I|L}]V[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S[AG][Q{I|L}]V[HA];{[QV]|[N{I|L}]|[RA]|[KV]}[KS][PS]AVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[EP]Q[{I|L}A][QP];{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}A]QAAVV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}[KS]A[PS]VV[HA];{[QD]|[EN]|[WG]|[KD]|[RS]}RRAAVV[HA];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VV[PS]AVV[HA] 7.3843;6.2588;5.3946;4.5775;3.9504;3.5936;3.5467;3.525;2.9172;2.8058 +;-;-;-;-;-;-;-;-;- + 409 + 1 1.747 37115.2 1.0 3998 4537 8535 HBL1_DMSO_200M_050219_2,8537 HBL1_DMSO_200M_050219_2,8537,QVISQAAVVHA True True QVISQAAVVHA 46.358249 561.81700438261 49137980.0 8535.0 ENSG00000176623|ENST00000406452|RMDN1;;nc|ENSG00000176623|Q96DB5-2|RMDN1;;nc|ENSG00000176623|Q96DB5-3|RMDN1 6.934014638264974 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8538 46.359 24.0 1617400.0 25 0 122730.0 + 13029 HASQPSLTV 9 74 470.248038865904 938.481524798608 2 470.2489196658134 MULTI CID FTMS 0 0 0 8535 1799778.25 0.2090899643736507 11 -1.1079635620117188 3 Unmodified _HASQPSLTV_ ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000175387|Q15796-2|SMAD2 41.8396318013385 0.0653578398400075 4 [HA]{[QS]|[NT]}[PS]{I|L}TV 9 0 + 38.178 0.0 0.0 4.0681 4.0681 73.882 0.0 0.0 0.0 5.92290838214776 10.8269582722749 5.92290838214776 5.92290838214776 0 0.5 0.0 1.305462187404089 0.0 + + [HA]{[QS]|[NT]}[PS]{I|L}TV;[{I|L}T][PS]A[HN]TV;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}A[HN]TV;{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}][HN]TV;{[TV]|[{I|L}S]}[TP]A[HN]TV;[PA]{[QS]|[NT]}[HS]{I|L}TV 4.0681;3.4369;3.1831;3.1343;3.0617;2.6972 +;-;-;-;-;- + 95 1 1.747 34958.5 1.0 3999 4537 8535 HBL1_DMSO_200M_050219_2,8538 HBL1_DMSO_200M_050219_2,8538,HASQPSLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8539 46.361 45.0 1157300.0 25 0 159380.0 -1 0 79 543.3009218374228 542.2936453708228 1 543.3013793826103 MULTI CID FTMS 0 0 0 8535 1594177.625 0.3286080659962764 4 -0.4264755249023437 4 4 K 1 -1 3.9794 0.0 0.0 0.73381 0.0 0.0 95.89308492336028 315.28058801822505 411.1736729415853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.73381 - 6 + 1 1.747 48361.1 1.0 4000 4537 8535 HBL1_DMSO_200M_050219_2,8539 HBL1_DMSO_200M_050219_2,8539, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8540 46.362 34.0 1593200.0 25 0 165990.0 + 24997 MPPPPPQGV 9 86 460.23852327962805 918.462493626056 2 460.2391235232353 MULTI CID FTMS 0 0 0 8535 1509410.0 0.081448643069416 79 -6.496921539306641 5 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 67.03532852164291 0.0222449892513529 4 [VG]EHPPQR 8 6 + 39.681 0.0 0.0 4.3203 4.3203 69.959 0.0 0.0 0.0 2.61993046835002 8.539171939081175 2.61993046835002 2.61993046835002 0 1.0629529932484498 1.6989700043360187 0.0 0.0 [VG]EHPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQR;[VG]EPHPQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR 4.3203;4.0351;3.2503;0.89457;0.74648 -;-;-;-;- 203 1 1.747 47647.3 1.0 4001 4537 8535 HBL1_DMSO_200M_050219_2,8540 HBL1_DMSO_200M_050219_2,8540,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8541 46.363 42.0 1352800.0 25 0 112960.0 + -1 TAADFCIFGT 10 96 551.7484583021203 1101.4823636710405 2 551.7494994997978 MULTI CID FTMS 0 0 0 8535 1260206.0 0.219364967379582 -2 0.1955795288085937 6 Carbamidomethyl (C) _TAADFC(Carbamidomethyl (C))IFGT_ REV__ENSG00000147481|ENST00000642720|SNTG1;REV__ENST00000524004.5_3_8:51571197-51621559:+|nuORF;REV__nc|ENSG00000147481|Q9NSN8-2|SNTG1 24.020572477871973 0.4289996903560794 4 [TA]ADY{I|L} 6 -1 63.606 0.0 0.0 5.7746 0.0 0.0 0.0 464.1650037633812 464.1650037633812 44.60938231506843 0.0 0.0 0.0 0 1.0941876774005248 2.0 0.4247425010840047 0.0 [TA]ADY{I|L} 5.7746 - 124 + 1 1.747 49981.5 1.0 4002 4537 8535 HBL1_DMSO_200M_050219_2,8541 HBL1_DMSO_200M_050219_2,8541,TAADFCIFGT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8542 46.364 50.0 1504600.0 25 0 211770.0 -1 0 73 336.7238045170618 671.4330561009236 2 336.7236511111259 MULTI CID FTMS 0 0 0 8535 1040647.4375 0.8270217289934553 -1 0.1172409057617187 7 4 AV{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6 -1 + 62.897 0.0 0.0 9.3676 9.3676 99.052 0.0 0.0 0.0 54.31392993565167 10.162326625411763 10.162326625411763 62.89742379213392 0 0.3807196863200844 2.0 0.6694451763165201 0.0 AV{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9.3676 - 39 + 1 1.747 66129.6 1.0 4003 4537 8535 HBL1_DMSO_200M_050219_2,8542 HBL1_DMSO_200M_050219_2,8542, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8543 46.366 91.0 640690.0 25 0 64838.0 + 3665 DAEMTTRMV 9 77 527.2378385896784 1052.4611242461567 2 527.2389404177666 MULTI CID FTMS 0 0 0 8535 649029.0 0.0084243232079137 9 -0.8894805908203125 8 Unmodified _DAEMTTRMV_ ENSG00000205220|ENST00000358514|PSMB10 57.72198328787511 0.0273433238377839 4 {[DA]|[EG]}EMTTRMV 9 0 + 82.79 0.0 0.0 7.8663 7.8663 90.984 0.0 0.0 0.0 59.60200035004867 4.436974992327123 4.436974992327123 9.18366291575822 0 1.3494850021680094 2.0 0.8494850021680094 0.4247425010840047 + + {[DA]|[EG]}EMTTRMV;{[DA]|[EG]}EMTT{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[DA]|[EG]}EMTT{I|L}{[CA]|SS}V;{[DA]|[EG]}E[W{M(Oxidation (M))|F}]RMV;{[DA]|[EG]}E[W{M(Oxidation (M))|F}]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[DA]|[EG]}{M(Oxidation (M))|F}[WE]RMV;{[DA]|[EG]}E[W{M(Oxidation (M))|F}]{I|L}{[CA]|SS}V;[{M(Oxidation (M))|F}T]RTTM[C(Carbamidomethyl (C))H];{[DA]|[EG]}E{[RE]|[WV]}[{M(Oxidation (M))|F}T]W;{[DA]|[EG]}E[{M(Oxidation (M))|F}T]WWV 7.8663;6.9937;6.4702;5.3516;4.8826;4.5905;4.354;4.1918;4.0219;3.8572 +;-;-;-;-;-;-;-;-;- + 183 + 1 1.747 51399.8 1.0 4004 4537 8535 HBL1_DMSO_200M_050219_2,8543 HBL1_DMSO_200M_050219_2,8543,DAEMTTRMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8544 46.369 124.0 569540.0 25 0 73083.0 -1 TKNERQVMK 9 84 575.3080563311353 0 575.3077880740166 PEAK CID FTMS 0 0 0 8535 462215.375 0.5714876762386432 -1 0.1172409057617187 9 Oxidation (M) _TKNERQVM(Oxidation (M))K_ ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A 22.736283301280096 0.1762661025464585 4 KTT[{I|L}P][DV]TT 9 -1 46.321 0.0 0.0 4.0328 0.0 0.0 63.99725427041228 125.07250391177968 189.069758182192 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 1.916386562212268 0.0 KTT[{I|L}P][DV]TT 4.0328 - 200 + 1 1.747 58715.2 1.0 4005 4537 8535 HBL1_DMSO_200M_050219_2,8544 HBL1_DMSO_200M_050219_2,8544,TKNERQVMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8545 46.375 345.0 258150.0 25 0 27346.0 15835 ISKNPVLVS 9 118 478.79225232119296 955.569951709186 2 478.7925292849541 MULTI CID FTMS 0 0 0 8535 291779.46875 1.0 0 0.0 10 Unmodified _ISKNPVLVS_ ENSG00000196704|ENST00000359904|AMZ2;nc|ENSG00000196704|Q86W34-5|AMZ2 26.268140514670165 0.1969607489560049 4 [{I|L}P]K[NS]V{I|L}SV 9 4 + 41.589 0.0 0.0 4.3523 4.3523 67.906 0.0 0.0 0.0 2.485739448312785 3.401209935633176 2.485739448312785 1.4437294995930614 0 1.4604093769761874 1.3979400086720375 0.2302046884880938 0.0 [{I|L}P]K[NS]V{I|L}SV;[{I|L}P]K[NS]{I|L}VSV;[{I|L}P]KQSVVSV;[{I|L}P]K[NS]VTVV;[{I|L}P]KQ[TA]{I|L}SV;[{I|L}P]K[NS]{I|L}SVV;[{I|L}P]K[AG]SVVSV;[{I|L}P]KQSVSVV;[KP]Q[VS]V{I|L}SV;[KP]{I|L}[NS]V{I|L}SV 4.3523;4.2012;3.8774;3.1989;3.1127;3.0479;2.9138;2.7241;2.5923;2.5923 -;-;-;-;-;-;-;-;-;- 565 1 1.747 71043.6 1.0 4006 4537 8535 HBL1_DMSO_200M_050219_2,8545 HBL1_DMSO_200M_050219_2,8545,ISKNPVLVS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8546 46.389 800.0 238980.0 25 0 44204.0 -1 NSDERDCEMR 10 122 635.7408348858222 1269.4671168384443 2 635.7411987185478 MULTI CID FTMS 0 0 0 8535 225828.046875 0.4078955775671296 -2 0.1955795288085937 11 Oxidation (M) _NSDERDCEM(Oxidation (M))R_ ENSG00000081479|ENST00000649046|LRP2 3.2813086475875832 0.7114585191678878 4 EEK{M(Oxidation (M))|F}{I|L}R 6 -1 41.86 0.0 0.0 3.2974 0.0 0.0 449.0208997666859 0.0 449.0208997666859 0.0 25.970325397914564 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.1237125054200235 EEK{M(Oxidation (M))|F}{I|L}R 3.2974 - 418 + 1 1.747 140916.3 0.8799999952316284 4007 4537 8535 HBL1_DMSO_200M_050219_2,8546 HBL1_DMSO_200M_050219_2,8546,NSDERDCEMR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8547 46.392 172.0 210750.0 25 0 14491.0 + 17170 KLIQESPTV 9 88 507.7956745344974 1013.5767961357948 2 507.7955810427666 MULTI CID FTMS 0 0 0 8535 194588.828125 0.5981135078520352 1 -0.0950889587402343 12 Unmodified _KLIQESPTV_ ENSG00000166037|ENST00000325542|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 29.081581746732265 0.1611639662936252 4 [TP][TA][K{I|L}]SPTV 10 6 [TP][TA][K{I|L}]S + + 24.654 10.179 1.4575 2.4323 2.4323 45.02 0.0 0.0 0.0 0.0 8.509562869230855 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 [TP][TA][K{I|L}]SPTV 2.4323 - 118 + 1 1.747 33945.8 1.0 4008 4537 8535 HBL1_DMSO_200M_050219_2,8547 HBL1_DMSO_200M_050219_2,8547,KLIQESPTV False True KLIQESPTV 46.392349 507.795581042767 3031711.75 8535.0 nc|ENSG00000166037|Q86XR8-4|CEP57;;nc|ENSG00000166037|Q86XR8-5|CEP57;;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;;nc|ENSG00000166037|Q86XR8-2|CEP57;;ENSG00000166037|ENST00000325542|CEP57 6.438925425211589 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8548 46.398 332.0 193470.0 25 0 14185.0 + -1 GVDLQEMVCA 10 116 569.2485632693979 1136.4825736055957 2 569.2501098513603 MULTI CID FTMS 0 0 0 8535 171099.9375 0.6639065321311259 -3 0.2427101135253906 13 Carbamidomethyl (C),Oxidation (M) _GVDLQEM(Oxidation (M))VC(Carbamidomethyl (C))A_ REV__ENSG00000095564|ENST00000265990|BTAF1 17.11289562659939 0.5604042439455784 4 [QP]SVTE 6 -1 42.267 0.0 0.0 3.7191 0.0 0.0 0.0 492.15680057433946 492.15680057433946 26.79548107594926 0.0 0.0 0.0 0 0.0 0.6989700043360187 1.589136830878453 0.0 [QP]SVTE 3.7191 - 252 1 1.747 53756.4 1.0 4009 4537 8535 HBL1_DMSO_200M_050219_2,8548 HBL1_DMSO_200M_050219_2,8548,GVDLQEMVCA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8549 46.412 800.0 161320.0 25 0 40076.0 -1 0 43 1158.140302501088 3471.399078103464 3 1158.474658191204 MULTI CID FTMS 0 0 0 8535 171752.703125 0.122740447790126 -3 0.2427101135253906 14 4 GC(Carbamidomethyl (C))Y{M(Oxidation (M))|F} 4 -1 14.157 0.0 0.0 0.40781 0.0 0.0 1255.437116288814 1685.7590161524809 2941.196132441295 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GC(Carbamidomethyl (C))Y{M(Oxidation (M))|F} 0.40781 - 67 + 1 1.747 108239.5 0.5600000023841858 4010 4537 8535 HBL1_DMSO_200M_050219_2,8549 HBL1_DMSO_200M_050219_2,8549, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8550 46.419 370.0 294510.0 25 0 132200.0 28774 PYESVMKVK 9 102 540.7911074577872 1079.5676619823744 2 540.7913085818291 MULTI CID FTMS 0 0 0 8535 162510.0 1.0 0 0.0 15 Unmodified _PYESVMKVK_ ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL 43.85829265575387 0.0542763391141878 4 [EP]YSVKM 7 5 40.469 0.0 0.0 3.7486 0.0 0.0 0.0 242.1489282432221 242.1489282432221 17.280929143502632 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 1.1307196863200843 0.0 [EP]YSVKM 3.7486 - 635 1 1.747 89999.6 1.0 4011 4537 8535 HBL1_DMSO_200M_050219_2,8550 HBL1_DMSO_200M_050219_2,8550,PYESVMKVK True False KPYESVMKV 46.418916 540.791308581829 1430322.25 8535.0 nc|ENSG00000239900|P30566-2|ADSL;;ENSG00000239900|ENST00000623063|ADSL 0.6245784362157186 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8551 46.434 800.0 141180.0 25 0 15627.0 -1 0 79 977.4235111324008 1952.8324693316013 2 977.4252807497978 MULTI CID FTMS 0 0 0 8535 130921.953125 0.935747916652707 -3 0.2427101135253906 16 4 E 1 -1 3.0989 0.0 0.0 0.15869 0.0 0.0 1458.6566403294514 362.1104830377563 1820.767123367208 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15869 - 14 + 1 1.747 80413.7 0.5699999928474426 4012 4537 8535 HBL1_DMSO_200M_050219_2,8551 HBL1_DMSO_200M_050219_2,8551, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8552 46.448 800.0 133430.0 25 0 6430.6 + 36458 TAAENGLTV 9 155 438.2267373018518 874.4389216705036 2 438.2268859744072 MULTI CID FTMS 0 0 0 8535 119539.3828125 0.987920746512522 -1 0.1172409057617187 17 Unmodified _TAAENGLTV_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 26.88365393820708 0.1891292719743517 4 TV 2 7 19.693 0.0 0.0 2.252 0.0 0.0 656.3117376878849 0.0 656.3117376878849 0.0 0.3662971603878091 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + TV 2.252 + + 159 + 1 1.747 85023.0 0.5600000023841858 4013 4537 8535 HBL1_DMSO_200M_050219_2,8552 HBL1_DMSO_200M_050219_2,8552,TAAENGLTV False True TAAENGLTV 46.447772 438.226885974407 1590299.25 8535.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 1.0922871530056 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8554 46.452 23.0 4123400.0 25 0 898960.0 -1 PLLRSLALCC 10 47 601.8237287449131 1201.632904556626 2 601.8243286013603 MULTI CID FTMS 0 0 0 8553 2350409.0 0.6673257372701729 5 -0.4945297241210937 1 2 Carbamidomethyl (C) _PLLRSLALC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000546735.5_1_12:49717501-49723306:+|nuORF;ENST00000551192.5_1_12:49719304-49723306:+|nuORF 3.5964929083625545 0.7100006075494749 4 {I|L}P 2 -1 10.969 0.0 0.0 0.91285 0.0 0.0 97.97432330026125 890.4975576445576 988.4718809448188 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}P 0.91285 - 8 + 1 1.747 72267.5 1.0 4014 4538 8553 HBL1_DMSO_200M_050219_2,8554 HBL1_DMSO_200M_050219_2,8554,PLLRSLALCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8555 46.453 18.0 3180100.0 25 0 626260.0 + 3254 AYGLSREV 8 61 447.7372684472624 893.4599839613248 2 447.7377807497978 MULTI CID FTMS 0 0 0 8553 3589985.25 1.0 0 0.0 2 Unmodified _AYGLSREV_ ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 15.847184025352805 0.6768015514314958 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VAVV{[WS]|[C(Carbamidomethyl (C)){I|L}]} 8 6 + 45.903 0.0 0.0 5.1377 5.1377 69.799 0.0 0.0 0.0 35.306955460734684 0.4575749056067479 0.4575749056067479 0.7795501485934864 0 0.9247425010840048 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VAVV{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GVVAV{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}VV{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}VVG{[ES]|[DT]|[{I|L}C]};[YG]AVV{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 5.1377;5.0504;4.915;4.8277;1.5272 -;-;-;-;- 83 + 1 1.747 48928.2 1.0 4015 4538 8553 HBL1_DMSO_200M_050219_2,8555 HBL1_DMSO_200M_050219_2,8555,AYGLSREV False True AYGLSREV 46.453342 447.737780749798 24397738.0 8553.0 ENSG00000158710|ENST00000368097|TAGLN2;;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;;nc|ENSG00000158710|P37802-2|TAGLN2 0.4606578449408213 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8556 46.455 75.0 1588200.0 25 0 326600.0 -1 0 74 966.4323678807548 1930.8501828283097 2 966.4340087771416 MULTI CID FTMS 0 0 0 8553 1364996.625 0.9543283705222269 -2 0.2123298645019531 3 4 {I|L}TNQ 4 -1 18.404 0.0 0.0 0.95316 0.0 0.0 1117.426192285384 354.1677135741386 1471.5939058595225 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}TNQ 0.95316 - 145 + 1 1.747 87072.1 1.0 4016 4538 8553 HBL1_DMSO_200M_050219_2,8556 HBL1_DMSO_200M_050219_2,8556, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8557 46.457 56.0 1176400.0 25 0 129110.0 + 39190 TYQKLARAL 9 71 532.3162622512605 1062.6179715693208 2 532.3167602419853 MULTI CID FTMS 0 0 0 8553 1182869.75 0.4094101853987836 2 -0.2196121215820312 4 Unmodified _TYQKLARAL_ ENSG00000269404|ENST00000595883|SPIB;nc|ENSG00000269404|Q01892-3|SPIB 49.55428908609986 0.0413471690215031 4 TYQK{I|L}AR[{I|L}A] 9 0 + 85.609 0.0 0.0 8.0564 8.0564 91.963 0.0 0.0 0.0 80.12456261857125 2.147642715192504 2.147642715192504 9.208187539523747 0 1.674742501084005 2.0 0.0 0.4247425010840047 + + TYQK{I|L}AR[{I|L}A];TY[AG]K{I|L}AR[{I|L}A] 8.0564;7.1899 +;- + 119 + 1 1.747 57364.7 1.0 4017 4538 8553 HBL1_DMSO_200M_050219_2,8557 HBL1_DMSO_200M_050219_2,8557,TYQKLARAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8558 46.458 72.0 871490.0 25 0 71816.0 + 16846 KIDEHHFVAV 10 73 398.88014628086455 1193.6186094427935 3 398.8803893923759 MULTI CID FTMS 0 0 0 8553 878956.375 0.1693778504440752 -2 0.2123298645019531 5 Unmodified _KIDEHHFVAV_ ENSG00000149313|ENST00000278618|AASDHPPT 23.78978130925829 0.4341852049148378 4 K{M(Oxidation (M))|F}VAV 5 5 42.691 0.0 0.0 3.5766 0.0 0.0 631.2804432599625 0.0 631.2804432599625 0.0 32.23320034371433 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 K{M(Oxidation (M))|F}VAV 3.5766 - 41 1 1.747 58889.4 1.0 4018 4538 8553 HBL1_DMSO_200M_050219_2,8558 HBL1_DMSO_200M_050219_2,8558,KIDEHHFVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8559 46.46 66.0 1231700.0 25 0 232740.0 22719 LQGSVPQVLDF 11 67 401.5515109185615 1201.6327033558844 3 401.5517761111259 MULTI CID FTMS 0 0 0 8553 784666.0 0.4769631322280605 5 -0.4945297241210937 6 Unmodified _LQGSVPQVLDF_ ENSG00000186448|ENST00000344387|ZNF197 4.11662792887243 0.8557254166428417 4 P 1 10 5.4846 0.0 0.0 0.45642 0.0 0.0 211.05902925228585 890.4986465310411 1101.5576757833269 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.45642 + + 9 + 1 1.747 66092.5 1.0 4019 4538 8553 HBL1_DMSO_200M_050219_2,8559 HBL1_DMSO_200M_050219_2,8559,LQGSVPQVLDF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8560 46.461 65.0 750930.0 25 0 62234.0 + 25317 NAGPPSHII 9 84 453.2453106751012 904.4760684170024 2 453.2458373904228 MULTI CID FTMS 0 0 0 8553 779413.5 0.7094270979345598 4 -0.4109230041503906 7 Unmodified _NAGPPSHII_ ENSG00000132128|ENST00000617190|LRRC41;nc|ENSG00000132128|Q15345-3|LRRC41 42.09456458481378 0.0639583784996157 4 {[QG]|[NA]}GP{I|L} 5 4 44.23 0.0 0.0 4.8901 0.0 0.0 0.0 449.22519861392817 449.22519861392817 31.042534724048387 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[QG]|[NA]}GP{I|L} 4.8901 - 137 + 1 1.747 44543.6 1.0 4020 4538 8553 HBL1_DMSO_200M_050219_2,8560 HBL1_DMSO_200M_050219_2,8560,NAGPPSHII True True NAGPPSHII 46.461369 453.245837390423 77062240.0 8553.0 ENSG00000132128|ENST00000617190|LRRC41;;nc|ENSG00000132128|Q15345-3|LRRC41 4.7712461948394775 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8561 46.463 58.0 820670.0 25 0 79706.0 + 14595 IIDNNDTQL 9 89 523.2609921508246 1044.507431368449 2 523.2620117068291 MULTI CID FTMS 0 0 0 8553 745609.5625 0.9149946959121288 -1 0.0950889587402343 8 Unmodified _IIDNNDTQL_ ENSG00000153815|ENST00000537098|CMIP;nc|ENSG00000153815|Q8IY22-2|CMIP;nc|ENSG00000153815|Q8IY22-3|CMIP 12.531546534597751 0.4974689918368763 4 {I|L}{I|L}DRA{M(Oxidation (M))|F}VD 8 6 35.103 0.0 0.0 3.3608 0.0 0.0 0.0 111.97339093692383 111.97339093692383 17.66843224010877 0.0 0.0 0.0 0 0.0 2.0 0.0 0.4247425010840047 {I|L}{I|L}DRA{M(Oxidation (M))|F}VD 3.3608 - 121 1 1.747 45643.7 1.0 4021 4538 8553 HBL1_DMSO_200M_050219_2,8561 HBL1_DMSO_200M_050219_2,8561,IIDNNDTQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8562 46.464 65.0 871730.0 25 0 81776.0 621 AEKSELPVV 9 86 486.2737903989693 970.5330278647386 2 486.2746765017509 MULTI CID FTMS 0 0 0 8553 715760.6875 0.7417106875403856 -1 0.0950889587402343 9 Unmodified _AEKSELPVV_ ENSG00000158158|ENST00000377075|CNNM4 32.30548876998284 0.1201446275138228 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WN]|[YH]}{I|L}PVV 8 4 + 45.212 0.0 0.0 4.6585 4.6585 82.305 0.0 0.0 0.0 12.648546751633198 6.989700043360188 6.989700043360188 12.648546751633198 0 1.1861818737241734 1.5228787452803376 0.6237125054200234 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WN]|[YH]}{I|L}PVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[H{I|L}]YPVV;[TA]WW{I|L}PVV;[HA][HA]Q{I|L}PVV;[VP]{[C(Carbamidomethyl (C))E]|[WC]}[R{I|L}]VV;[HA]Q[HA]{I|L}PVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[H{I|L}]YVVP;{[ET]|[MV]}[RV][DG]PVV;[HA][HA][AG]{I|L}PVV;[HA]Q{I|L}[HA]PVV 4.6585;3.3552;2.1359;2.116;1.9328;1.8058;1.5284;1.3951;1.1672;0.93504 -;-;-;-;-;-;-;-;-;- 241 1 1.747 47993.9 1.0 4022 4538 8553 HBL1_DMSO_200M_050219_2,8562 HBL1_DMSO_200M_050219_2,8562,AEKSELPVV True True HAHAQIPVV 46.464392 486.274676501751 12980593.0 8553.0 nc|ENSG00000112701|Q9GZR1-2|SENP6;;ENST00000487548.2_1_6:76343389-76344528:+|nuORF;;ENSG00000112701|ENST00000447266|SENP6 3.7016000747680655 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8563 46.476 644.0 266330.0 25 0 56783.0 -1 0 62 1069.105775968252 3204.2954985049564 3 1069.442187488079 MULTI CID FTMS 0 0 0 8553 515889.5 0.8912471494713565 1 -0.1033096313476562 10 4 E 1 -1 6.9897 0.0 0.0 0.21814 0.0 0.0 2548.0657534115344 524.1633394830686 3072.229092894603 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21814 - 33 + 1 1.747 147776.1 1.0 4023 4538 8553 HBL1_DMSO_200M_050219_2,8563 HBL1_DMSO_200M_050219_2,8563, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8564 46.488 739.0 341010.0 25 0 16516.0 + 16848 KIDEHHFVAV 10 157 597.8167551379751 1193.61895734275 2 597.8177368044853 MULTI CID FTMS 0 0 0 8553 278917.90625 0.1707409069010647 -2 0.2123298645019531 11 Unmodified _KIDEHHFVAV_ ENSG00000149313|ENST00000278618|AASDHPPT 125.0377797344192 0.000220824405701 4 [K{I|L}]DEHH{M(Oxidation (M))|F}VAV 10 0 + 105.47 0.0 0.0 8.8363 8.8363 97.049 0.0 0.0 0.0 23.39182536465522 71.87827225270333 23.39182536465522 22.250547101681875 0 2.5669015600442577 1.0 0.535666875892183 1.5852587893338912 + + [K{I|L}]DEHH{M(Oxidation (M))|F}VAV;[K{I|L}]D[C(Carbamidomethyl (C))D]K{M(Oxidation (M))|F}VAV;{[VA]|[{I|L}G]}[VS]EHH{M(Oxidation (M))|F}VAV;[K{I|L}]D[C(Carbamidomethyl (C))S]R{M(Oxidation (M))|F}VAV;{[VA]|[{I|L}G]}[VS][C(Carbamidomethyl (C))D]K{M(Oxidation (M))|F}VAV;{[YC]|[HE]}DH{I|L}K{M(Oxidation (M))|F}VAV;[K{I|L}]D[C(Carbamidomethyl (C))S][VG]{M(Oxidation (M))|F}VAV;[K{I|L}]D[C(Carbamidomethyl (C))D]{M(Oxidation (M))|F}KVAV;{[VA]|[{I|L}G]}[VS][C(Carbamidomethyl (C))S]R{M(Oxidation (M))|F}VAV;K{I|L}DEHH{M(Oxidation (M))|F}VAV 8.8363;6.9722;6.7548;6.6537;6.0678;6.0203;5.8859;5.8748;5.7492;5.4362 +;-;-;-;-;-;-;-;-;+ + 5588 1 1.747 184575.8 1.0 4024 4538 8553 HBL1_DMSO_200M_050219_2,8564 HBL1_DMSO_200M_050219_2,8564,KIDEHHFVAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8565 46.492 205.0 402100.0 25 0 44699.0 + 13545 HPFFSRQKI 9 104 387.2168883196814 1158.6288355592442 3 387.2167846560478 MULTI CID FTMS 0 0 0 8553 267862.15625 0.3500318196303924 3 -0.3313865661621094 12 Unmodified _HPFFSRQKI_ ENST00000560763.5_2_14:103800597-103802258:+|nuORF;ENST00000558506.1_1_14:103801937-103802258:+|nuORF 28.23362336080872 0.1719529537093671 4 H{I|L}M{M(Oxidation (M))|F}KDQK{I|L} 9 4 + 47.833 0.0 0.0 4.1284 4.1284 67.183 0.0 0.0 0.0 26.049439939844603 4.36261833834093 4.36261833834093 1.519530800542633 0 0.809894379144197 0.0 0.3807196863200844 0.0 H{I|L}M{M(Oxidation (M))|F}KDQK{I|L};{I|L}HM{M(Oxidation (M))|F}KDQK{I|L};H{I|L}M{M(Oxidation (M))|F}KD[AG]K{I|L};{I|L}HM{M(Oxidation (M))|F}KD[AG]K{I|L};HP{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RV]{I|L};H{I|L}M{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RV]{I|L};{I|L}HM{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RV]{I|L};H{I|L}[YV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QK{I|L};{I|L}H[YV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QK{I|L} 4.1284;3.9972;3.3336;3.2025;2.7546;2.4947;2.3636;1.4478;0.9501 -;-;-;-;-;-;-;-;- 210 + 1 1.747 71196.2 1.0 4025 4538 8553 HBL1_DMSO_200M_050219_2,8565 HBL1_DMSO_200M_050219_2,8565,HPFFSRQKI False False HPFFSRQKI 46.492375 387.216784656048 13830655.0 8553.0 ENST00000560763.5_2_14:103800597-103802258:+|nuORF;;ENST00000558506.1_1_14:103801937-103802258:+|nuORF 1.4401469628016157 3.0 True 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8566 46.5 405.0 255830.0 25 0 22970.0 + 42312 VSVICKAL 8 120 416.7513259654405 831.488098997681 2 416.7517578005791 MULTI CID FTMS 0 0 0 8553 201916.578125 0.6274702646650926 3 -0.3313865661621094 13 Unmodified _VSVICKAL_ REV__ENSG00000140688|ENST00000327237|RUSF1 14.581692164780916 0.6954967302934248 4 {M(Oxidation (M))|F}K 2 -1 22.351 0.0 0.0 2.6881 0.0 0.0 538.3467243412342 0.0 538.3467243412342 0.0 4.732400742615123 0.0 0.0 0 0.5 0.0 0.0 0.2887254899964357 {M(Oxidation (M))|F}K 2.6881 - 158 + 1 1.747 89541.8 1.0 4026 4538 8553 HBL1_DMSO_200M_050219_2,8566 HBL1_DMSO_200M_050219_2,8566,VSVICKAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8567 46.513 800.0 236800.0 25 0 11942.0 + 25838 NLDPAVHEV 9 189 497.2527200426781 992.4908871521562 2 497.2535278201103 MULTI CID FTMS 0 0 0 8553 177226.6875 0.9775886926789108 1 -0.1033096313476562 14 Unmodified _NLDPAVHEV_ ENSG00000198522|ENST00000610189|GPN1;ENST00000461249.1_1_2:27852141-27855513:+|nuORF;ENST00000478484.5_1_2:27851925-27854072:+|nuORF;ENST00000503738.5_1_2:27851561-27855513:+|nuORF;nc|ENSG00000198522|Q9HCN4-4|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1 68.08070601005525 0.0218408846571049 4 {[QV]|[N{I|L}]|[RA]|[KV]}DPG{I|L}HEV 9 2 + 64.975 0.0 0.0 6.5466 6.5466 84.284 0.0 0.0 0.0 22.33808883474917 6.28388930050312 6.28388930050312 6.28388930050312 0 1.3494850021680094 2.0 0.9698565171985376 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}DPG{I|L}HEV;{[QV]|[N{I|L}]|[RA]|[KV]}DPG{I|L}HD{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DPAVHEV;{[QV]|[N{I|L}]|[RA]|[KV]}DPG{I|L}{NN|[MP]|[D{I|L}]|[EV]}H;{[QV]|[N{I|L}]|[RA]|[KV]}DV[PA]HEV;{[QV]|[N{I|L}]|[RA]|[KV]}DPAVHD{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DV[PA]HD{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DPAV{NN|[MP]|[D{I|L}]|[EV]}H;{[QV]|[N{I|L}]|[RA]|[KV]}DPY[VS]SV;{[QV]|[N{I|L}]|[RA]|[KV]}DV[VS]{M(Oxidation (M))|F}TV 6.5466;5.9135;5.8654;5.4799;5.471;5.2323;4.8379;4.5078;4.5063;4.4539 -;-;+;-;-;-;-;-;-;- + 1077 + 1 1.747 141399.9 0.800000011920929 4027 4538 8553 HBL1_DMSO_200M_050219_2,8567 HBL1_DMSO_200M_050219_2,8567,NLDPAVHEV True True NLDPAVHEV 46.513436 497.25352782011 1668792.75 8553.0 ENSG00000198522|ENST00000610189|GPN1;;ENST00000503738.5_1_2:27851561-27855513:+|nuORF;;ENST00000478484.5_1_2:27851925-27854072:+|nuORF;;nc|ENSG00000198522|Q9HCN4-4|GPN1;;ENST00000461249.1_1_2:27852141-27855513:+|nuORF;;nc|ENSG00000198522|Q9HCN4-5|GPN1 8.417484760284424 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8568 46.524 505.0 391660.0 25 0 25483.0 + 12153 GQMDPSAQI 9 154 473.7183474638989 945.4221419945976 2 473.7194091677666 MULTI CID FTMS 0 0 0 8553 164753.453125 0.1296762662479332 -2 0.2123298645019531 15 Unmodified _GQMDPSAQI_ ENSG00000164880|ENST00000404767|INTS1;ENST00000493446.1_1_7:1510215-1510538:-|nuORF 86.33184430468982 0.0159826143231117 4 {[QG]|[NA]}MDPSAQ{I|L} 9 0 + 66.965 0.0 0.0 7.0831 7.0831 77.136 0.0 0.0 0.0 0.5926340775231864 14.973024840566469 0.5926340775231864 0.5926340775231864 0 1.5044321917401078 0.6020599913279624 0.9247425010840048 0.7302046884880937 + + {[QG]|[NA]}MDPSAQ{I|L};[AG]GMDPSAQ{I|L};[AG]GTP[EC]AQ{I|L};{[QG]|[NA]}MDPSA[AG]{I|L};{[QG]|[NA]}TP[EC]AQ{I|L};[AG]GMDPSA[AG]{I|L};[PS]AQ[EC]AQ{I|L};[PS]ADMNAQ{I|L};[AG]GTPDMGQ{I|L};{[QG]|[NA]}MDPTGQ{I|L} 7.0831;7.0204;6.412;6.1091;6.105;6.0511;5.9752;5.9072;5.8488;5.8102 +;-;-;-;-;-;-;-;-;- + 1130 1 1.747 155207.8 1.0 4028 4538 8553 HBL1_DMSO_200M_050219_2,8568 HBL1_DMSO_200M_050219_2,8568,GQMDPSAQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8569 46.537 800.0 85835.0 25 0 9558.2 17976 KRMKEKRNKN 10 100 666.3909769023224 0 666.3904296755791 PEAK CID FTMS 0 0 0 8553 114341.0546875 0.8215120781287854 9 -0.91815185546875 16 Unmodified _KRMKEKRNKN_ ENSG00000129810|ENST00000412997|SGO1;nc|ENSG00000129810|Q5FBB7-2|SGO1;nc|ENSG00000129810|Q5FBB7-3|SGO1;nc|ENSG00000129810|Q5FBB7-4|SGO1;nc|ENSG00000129810|Q5FBB7-5|SGO1;nc|ENSG00000129810|Q5FBB7-7|SGO1;nc|ENSG00000129810|Q5FBB7|SGO1 1.4819007175156935 0.3961065659209837 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.747 61025.1 0.6100000143051147 4029 4538 8553 HBL1_DMSO_200M_050219_2,8569 HBL1_DMSO_200M_050219_2,8569,KRMKEKRNKN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8570 46.551 800.0 59309.0 25 0 4113.4 + -1 FCVCFFKFPFY 11 69 781.3547649521153 1560.6949769710304 2 781.8558837771416 MULTI CID FTMS 0 0 0 8553 111814.4453125 0.858170950051626 -1 0.0950889587402343 17 2 Carbamidomethyl (C) _FC(Carbamidomethyl (C))VC(Carbamidomethyl (C))FFKFPFY_ REV__ENST00000474340.1_1_9:95003027-95004705:-|nuORF 6.2057823575117 0.8458686499021061 4 EAQC[{I|L}P]{M(Oxidation (M))|F}Y 8 -1 35.252 0.0 0.0 2.2588 0.0 0.0 591.2786732404312 0.0 591.2786732404312 0.0 13.623956595632546 0.0 0.0 0 0.718765315847925 0.0 0.0 0.805462187404089 EAQC[{I|L}P]{M(Oxidation (M))|F}Y 2.2588 - 279 1 1.747 40650.4 0.550000011920929 4030 4538 8553 HBL1_DMSO_200M_050219_2,8570 HBL1_DMSO_200M_050219_2,8570,FCVCFFKFPFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8572 46.555 8.8 5957900.0 25 0 516000.0 + 36482 TADASTYSSVT 11 81 368.1683440049303 1101.483202614991 3 368.1685974001884 MULTI CID FTMS 0 0 0 8571 6285070.0 1.0 0 0.0 1 Unmodified _TADASTYSSVT_ REV__ENSG00000034971|ENST00000037502|MYOC 22.736283301280096 0.5583477779825423 4 [TA]D[RH]YD[QP] 9 -1 + 48.407 0.0 0.0 4.3947 4.3947 77.036 0.0 0.0 0.0 17.52620218746307 7.147642715192504 7.147642715192504 7.7815125038364386 0 0.4247425010840047 2.0 0.5796896906561032 0.0 [TA]D[RH]YD[QP];[TA]DY[RH]D[QP];{[DA]|[EG]}T[RH]YD[QP];{[YD]|[{M(Oxidation (M))|F}M]}AT[RH]D[QP];{[DA]|[EG]}TY[RH]D[QP];{[SA]|[TG]}E[RH]YD[QP];{[DA]|[EG]}YT[RH]D[QP];{[SA]|[TG]}EY[RH]D[QP];{[{M(Oxidation (M))|F}C]|[YS]}{[CP]|[EA]}[RH]D[QP] 4.3947;3.6882;2.8035;2.1407;2.0971;1.9924;1.5748;1.2859;0.077072 -;-;-;-;-;-;-;-;- 181 1 1.736 48400.9 1.0 4031 4539 8571 HBL1_DMSO_200M_050219_2,8572 HBL1_DMSO_200M_050219_2,8572,TADASTYSSVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8573 46.557 46.0 958600.0 25 0 95941.0 + 3588 DAAISKVQV 9 77 465.76613376263856 929.5177145920773 2 465.7665588259697 MULTI CID FTMS 0 0 0 8571 822243.625 0.2203127151900532 2 -0.2280769348144531 2 Unmodified _DAAISKVQV_ ENSG00000127481|ENST00000375254|UBR4;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4 45.69961567697781 0.0497987121815769 4 {[DA]|[EG]}A{I|L}SKVQV 9 0 + 51.679 0.0 0.0 5.5597 5.5597 78.374 0.0 0.0 0.0 24.693510576534475 10.23850404910938 10.23850404910938 4.603641473898321 0 1.0 1.6989700043360187 0.3252574989159953 0.3054621874040891 + + {[DA]|[EG]}A{I|L}SKVQV;{[DA]|[EG]}A{I|L}SKQVV;{[DA]|[EG]}A{I|L}SKV[AG]V;{[DA]|[EG]}A{I|L}SK[AG]VV;[KS]V{I|L}A[DV][QA];[KS]{I|L}VA[DV][QA] 5.5597;5.0645;4.2405;4.0738;2.5457;1.8458 +;-;-;-;-;- + 145 + 1 1.736 37220.4 1.0 4032 4539 8571 HBL1_DMSO_200M_050219_2,8573 HBL1_DMSO_200M_050219_2,8573,DAAISKVQV True True DAAISKVQV 46.556729 465.76655882597 55221908.0 8571.0 ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4 5.927633603413899 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8574 46.558 33.0 1476600.0 25 0 389610.0 + 42931 VVRVQEVV 8 57 464.28460007905977 926.5546472249196 2 464.2849304080009 MULTI CID FTMS 0 0 0 8571 1535570.875 0.4550954782105126 -1 0.1033096313476562 3 Unmodified _VVRVQEVV_ REV__ENSG00000130764|ENST00000378251|LRRC47 18.13498045792455 0.6430038125133779 4 VVN[W{I|L}]VVV 8 -1 + 43.192 0.0 0.0 4.6616 4.6616 70.394 0.0 0.0 0.0 2.059319556497244 15.2334196030246 2.059319556497244 2.059319556497244 0 0.9247425010840048 1.0 0.0 0.0 VVN[W{I|L}]VVV;[QA]R{[QN]|[E{I|L}]|[KN]}{I|L}VV;[QA]{I|L}[W{I|L}]VVV;VVN{[RE]|[WV]}{I|L}VV;[QA]{I|L}{[RE]|[WV]}{I|L}VV;VVGG[W{I|L}]VVV;VVGG{[RE]|[WV]}{I|L}VV 4.6616;4.4393;4.4393;4.3367;4.1144;3.662;3.3371 -;-;-;-;-;-;- 80 1 1.736 44245.6 1.0 4033 4539 8571 HBL1_DMSO_200M_050219_2,8574 HBL1_DMSO_200M_050219_2,8574,VVRVQEVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8575 46.564 323.0 523710.0 25 0 130430.0 -1 0 49 1121.131510485241 3360.372702055924 3 1121.467700183392 MULTI CID FTMS 0 0 0 8571 1226008.375 1.0 0 0.0 4 4 E 1 -1 11.237 0.0 0.0 0.3344 0.0 0.0 2704.143160100009 524.1623943309448 3228.3055544309545 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E 0.3344 - 41 + 1 1.736 147086.1 1.0 4034 4539 8571 HBL1_DMSO_200M_050219_2,8575 HBL1_DMSO_200M_050219_2,8575, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8576 46.566 99.0 848560.0 25 0 125160.0 + 21767 LPMVNKIR 8 104 324.2004475328731 969.5795131988192 3 324.2003661990166 MULTI CID FTMS 0 0 0 8571 525158.5625 0.7608411348068731 1 -0.116302490234375 5 Unmodified _LPMVNKIR_ REV__ENSG00000198626|ENST00000366574|RYR2;REV__nc|ENSG00000198626|Q92736-2|RYR2 18.1463463914782 0.6428359029697936 4 {I|L}PMK{I|L}KMG 8 -1 46.214 0.0 0.0 4.7664 0.0 0.0 0.0 68.05136285953358 68.05136285953358 35.24501786224994 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6139829889124311 {I|L}PMK{I|L}KMG 4.7664 - 81 + 1 1.736 70855.8 1.0 4035 4539 8571 HBL1_DMSO_200M_050219_2,8576 HBL1_DMSO_200M_050219_2,8576,LPMVNKIR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8577 46.571 268.0 509780.0 25 0 35740.0 + 22462 LPVAVKHVV 9 127 481.3135913788643 960.6126298245288 2 481.3136779665947 MULTI CID FTMS 0 0 0 8571 514612.625 0.6642833965334771 1 -0.116302490234375 6 Unmodified _LPVAVKHVV_ ENSG00000198355|ENST00000360612|PIM3 60.38955033654506 0.025866396858536 4 {I|L}PVAE 5 5 60.569 0.0 0.0 6.3053 0.0 0.0 0.0 448.2947786920532 448.2947786920532 10.28053680525852 0.0 0.0 0.0 0 1.086696871556164 1.6989700043360187 0.7742275032520141 0.0 {I|L}PVAE 6.3053 - 980 + 1 1.736 107615.1 1.0 4036 4539 8571 HBL1_DMSO_200M_050219_2,8577 HBL1_DMSO_200M_050219_2,8577,LPVAVKHVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8578 46.574 128.0 716400.0 25 0 80076.0 15437 IPPSISRV 8 88 434.76587112779487 867.5171893223898 2 434.7660400271416 MULTI CID FTMS 0 0 0 8571 476134.75 0.7982966387768058 -1 0.1033096313476562 7 Unmodified _IPPSISRV_ ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6-3|BRWD1;nc|ENSG00000185658|Q9NSI6-4|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1 22.736283301280096 0.5659792798204337 4 {I|L}PPS 4 4 52.735 0.0 0.0 6.0789 0.0 0.0 0.0 470.2755221002563 470.2755221002563 39.63615337528019 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}PPS 6.0789 + + 124 + 1 1.736 76684.6 1.0 4037 4539 8571 HBL1_DMSO_200M_050219_2,8578 HBL1_DMSO_200M_050219_2,8578,IPPSISRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8579 46.577 166.0 456920.0 25 0 22925.0 + 36596 TAMPVTQSV 9 114 467.2377619615096 932.4609709898192 2 467.2390930056572 MULTI CID FTMS 0 0 0 8571 429082.9375 1.0 0 0.0 8 Unmodified _TAMPVTQSV_ ENSG00000136451|ENST00000581208|VEZF1 41.8396318013385 0.0653578398400075 4 [TA]G[VP]SV[R{M(Oxidation (M))|F}] 9 5 + 30.414 0.0 0.0 3.2617 3.2617 62.368 0.0 0.0 0.0 0.3503590450030529 4.172809246458243 0.3503590450030529 0.3503590450030529 0 0.0 1.5228787452803376 0.7614393726401688 0.0 [TA]G[VP]SV[R{M(Oxidation (M))|F}];[VP]TQSV[R{M(Oxidation (M))|F}];[TA]GSVPV[R{M(Oxidation (M))|F}];[VP]TAGSV[R{M(Oxidation (M))|F}];[TA][VP]GSV[R{M(Oxidation (M))|F}];[R{M(Oxidation (M))|F}]PVAASSV;[R{M(Oxidation (M))|F}]PV[QT]SV;[TA]AATPV[R{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}PQSV[R{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}PAGSV[R{M(Oxidation (M))|F}] 3.2617;3.2241;3.1829;3.0125;2.4573;2.4059;2.034;1.8478;1.766;1.5544 -;-;-;-;-;-;-;-;-;- 547 1 1.736 64737.5 1.0 4038 4539 8571 HBL1_DMSO_200M_050219_2,8579 HBL1_DMSO_200M_050219_2,8579,TAMPVTQSV True True TAMPVTQSV 46.576769 467.239093005657 2902115.75 8571.0 ENSG00000136451|ENST00000581208|VEZF1 6.351549784342448 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8580 46.581 224.0 373710.0 25 0 40449.0 20932 LNEISEETTIQ 11 104 638.8179856560439 1275.6214183788877 2 638.8186523318291 MULTI CID FTMS 0 0 0 8571 373232.46875 0.594678107886766 -1 0.1033096313476562 9 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 38.61474834105838 0.2337350513322792 4 {I|L}NAD{M(Oxidation (M))|F}RADN{I|L}Q 11 7 + 71.596 0.0 0.0 5.6126 5.6126 78.073 0.0 0.0 0.0 27.2891107096216 13.375923253651052 13.375923253651052 4.195251364264408 0 1.917735320183944 1.2218487496163564 0.4247425010840047 1.0994850021680094 {I|L}NAD{M(Oxidation (M))|F}RADN{I|L}Q;{I|L}NWQ[{M(Oxidation (M))|F}V]DN{I|L}Q;{I|L}NAD{[CA]|SS}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}NAD{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}NW{[CA]|SS}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}NW{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}NA{[C(Carbamidomethyl (C))E]|[WC]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}{M(Oxidation (M))|F}{I|L}W{I|L}D[DN]{I|L}Q;{[CA]|SS}{I|L}{[WN]|[YH]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}{M(Oxidation (M))|F}{I|L}W{I|L}{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}Q 5.6126;5.2837;5.1458;5.1022;5.0043;4.9642;4.3753;2.9799;2.622;2.2525 -;-;-;-;-;-;-;-;-;- 532 + 1 1.736 69701.5 1.0 4039 4539 8571 HBL1_DMSO_200M_050219_2,8580 HBL1_DMSO_200M_050219_2,8580,LNEISEETTIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8581 46.593 697.0 462930.0 25 0 47238.0 23894 LVLRLPWRV 9 222 384.5836820243276 1150.729216673183 3 384.5838500857353 MULTI CID FTMS 0 0 0 8571 346076.84375 0.9477848992303524 2 -0.2280769348144531 10 Unmodified _LVLRLPWRV_ ENSG00000154305|ENST00000344922|MIA3;ENST00000470521.1_1_1:222791452-222819114:+|nuORF;nc|ENSG00000154305|Q5JRA6-2|MIA3;nc|ENSG00000154305|Q5JRA6-3|MIA3 12.240655878213236 0.5053430591993562 4 E{I|L}KE{[WT]|[RM]}V 7 6 22.58 0.0 0.0 1.9622 0.0 0.0 247.2479187838161 0.0 247.2479187838161 0.0 3.1158382535459594 0.0 0.0 0 0.0 0.0 0.5 0.0 E{I|L}KE{[WT]|[RM]}V 1.9622 - 1080 + 1 1.736 252422.2 1.0 4040 4539 8571 HBL1_DMSO_200M_050219_2,8581 HBL1_DMSO_200M_050219_2,8581,LVLRLPWRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8582 46.597 213.0 284590.0 25 0 20567.0 + 39178 TYPSQAPVY 9 111 513.2498994761708 1024.4852460191414 2 513.2507812380791 MULTI CID FTMS 0 0 0 8571 284277.40625 0.758639154582511 1 -0.116302490234375 11 Unmodified _TYPSQAPVY_ ENSG00000136738|ENST00000377524|STAM 34.10243960390752 0.1078313939113124 4 [YT]{I|L}[YT]T{M(Oxidation (M))|F} 7 7 38.02 0.0 0.0 3.7111 0.0 0.0 0.0 132.04602991275627 132.04602991275627 20.54576644454535 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.8807196863200843 0.0 [YT]{I|L}[YT]T{M(Oxidation (M))|F} 3.7111 - 357 + 1 1.736 52544.3 1.0 4041 4539 8571 HBL1_DMSO_200M_050219_2,8582 HBL1_DMSO_200M_050219_2,8582,TYPSQAPVY True True TYPSQAPVY 46.597156 513.250781238079 5407270.0 8571.0 ENSG00000136738|ENST00000377524|STAM 5.713128248850505 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8583 46.611 800.0 320700.0 25 0 30422.0 + 21618 LPKYGVKV 8 237 301.860915054112 902.5609157625358 3 301.8602172732353 MULTI CID FTMS 0 0 0 8571 188655.34375 1.0 0 0.0 12 Unmodified _LPKYGVKV_ ENSG00000122406|ENST00000370321|RPL5;ENST00000426545.1_1_22:43172768-43173086:-|nuORF 13.042465956692816 0.7182358012947757 4 {I|L}PKY[VG]VK 8 2 + 42.083 0.0 0.0 4.6626 4.6626 69.043 0.0 0.0 0.0 21.93820026016113 1.4123524720805063 1.4123524720805063 1.4123524720805063 0 0.2396518287104437 0.5528419686577808 0.0 0.3345468286156847 {I|L}PKY[VG]VK;{I|L}PKY[VG]KV;{I|L}PK[YR]VK;{I|L}PKV[YG]VK;{I|L}PK[YR]KV;{I|L}PKV[YG]KV;{I|L}PKV[YR]K;{I|L}PVK[YG]VK;{I|L}PVK[YG]KV;{I|L}PVK[YR]K 4.6626;4.5061;4.2859;4.2217;4.1294;4.0652;3.6875;3.5546;3.3981;3.0205 -;+;-;-;-;-;-;-;-;- + 560 + 1 1.736 206852.1 0.6899999976158142 4042 4539 8571 HBL1_DMSO_200M_050219_2,8583 HBL1_DMSO_200M_050219_2,8583,LPKYGVKV False True LPKYGVKV 46.610956 301.860217273235 1914631.0 8571.0 ENSG00000122406|ENST00000370321|RPL5;;ENST00000426545.1_1_22:43172768-43173086:-|nuORF 3.860582669576009 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8584 46.625 800.0 208900.0 25 0 20508.0 + 8056 ENREYYRDYD 10 142 711.7993417401157 1421.5841305470312 2 711.8002197146416 MULTI CID FTMS 0 0 0 8571 173505.125 0.7357251734210171 -1 0.1033096313476562 13 Unmodified _ENREYYRDYD_ REV__ENSG00000091009|ENST00000265271|RBM27 12.240655878213236 0.6421556946785427 4 {[QG]|[NA]}EHEAEQNA{M(Oxidation (M))|F}Y 12 -1 + 95.38 0.0 0.0 6.7094 6.7094 75.883 0.0 0.0 0.0 0.6606124668105906 11.382353118286233 0.6606124668105906 0.6606124668105906 0 1.1989700043360187 0.9208187539523752 1.9406140654642807 1.350576203518622 {[QG]|[NA]}EHEAEQNA{M(Oxidation (M))|F}Y;[QA]HDEAEQNA{M(Oxidation (M))|F}Y;[AG]AHDEAEQNA{M(Oxidation (M))|F}Y;[AG]DAHEAEQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}EHEAQENA{M(Oxidation (M))|F}Y;[QA]HDEAQENA{M(Oxidation (M))|F}Y;[QA]DHEAEQNA{M(Oxidation (M))|F}Y;[AG]AHDEAQENA{M(Oxidation (M))|F}Y;[AG]ADHEAEQNA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAEQNA{M(Oxidation (M))|F}Y 6.7094;6.6629;6.6514;6.5338;6.4976;6.4512;6.4493;6.4397;6.4378;6.3694 -;-;-;-;-;-;-;-;-;- 16999 1 1.736 119684.9 0.8299999833106995 4043 4539 8571 HBL1_DMSO_200M_050219_2,8584 HBL1_DMSO_200M_050219_2,8584,ENREYYRDYD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8585 46.64 800.0 302810.0 25 0 29894.0 43138 VYPFQGDSTV 10 162 556.7644004819243 1111.5142480306486 2 556.7648193240166 MULTI CID FTMS 0 0 0 8571 171204.953125 0.4424239632058367 -2 0.1983985900878906 14 Unmodified _VYPFQGDSTV_ ENSG00000197353|ENST00000359228|LYPD2 24.020572477871973 0.4289996903560794 4 [YV]PSG{I|L}R 7 6 64.825 0.0 0.0 5.8322 0.0 0.0 0.0 336.0692537897094 336.0692537897094 38.94431628684133 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.6989700043360187 0.4247425010840047 [YV]PSG{I|L}R 5.8322 - 2736 + 1 1.736 193091.3 0.8999999761581421 4044 4539 8571 HBL1_DMSO_200M_050219_2,8585 HBL1_DMSO_200M_050219_2,8585,VYPFQGDSTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8586 46.654 800.0 92897.0 25 0 9924.0 + -1 LMQTLSEMDEY 11 107 688.2902888938114 1374.5660248544227 2 688.2931396365166 MULTI CID FTMS 0 0 0 8571 114803.8671875 0.500735109609126 2 -0.2280769348144531 15 Oxidation (M) _LM(Oxidation (M))QTLSEMDEY_ REV__ENSG00000006652|ENST00000403825|IFRD1;REV__ENST00000489994.5_1_7:112107978-112115571:+|nuORF;REV__nc|ENSG00000288640|O00458-2|IFRD1 11.494710602746466 0.7960433852372589 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TQ{I|L}T 6 -1 23.76 0.0 0.0 1.7286 0.0 0.0 0.0 668.1864831886602 668.1864831886602 7.813572109354755 0.0 0.0 0.0 0 0.0 0.958607314841775 0.3054621874040891 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TQ{I|L}T 1.7286 - 508 1 1.736 58752.9 0.699999988079071 4045 4539 8571 HBL1_DMSO_200M_050219_2,8586 HBL1_DMSO_200M_050219_2,8586,LMQTLSEMDEY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8587 46.667 800.0 231800.0 25 0 35538.0 + -1 EVLSRLVMK 9 129 545.817622950928 1089.620692968656 2 545.8188354372978 MULTI CID FTMS 0 0 0 8571 106246.6015625 0.3980676301070052 -2 0.1983985900878906 16 Oxidation (M) _EVLSRLVM(Oxidation (M))K_ REV__ENSG00000095066|ENST00000397668|HOOK2;REV__nc|ENSG00000095066|Q96ED9-2|HOOK2 15.847184025352805 0.4077185912009129 4 KTT[{I|L}P][WP]K 8 -1 34.007 0.0 0.0 3.121 0.0 0.0 120.0587140653475 0.0 120.0587140653475 0.0 17.653383001076204 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.2887254899964357 KTT[{I|L}P][WP]K 3.121 - 1242 + 1 1.736 144332.5 0.699999988079071 4046 4539 8571 HBL1_DMSO_200M_050219_2,8587 HBL1_DMSO_200M_050219_2,8587,EVLSRLVMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8589 46.672 15.0 2680400.0 25 0 220160.0 + -1 TAADFCIFGT 10 78 551.7484583021203 1101.4823636710405 2 551.7493774294853 MULTI CID FTMS 0 0 0 8588 3409187.75 0.5934397706165663 1 -0.1117744445800781 1 Carbamidomethyl (C) _TAADFC(Carbamidomethyl (C))IFGT_ REV__ENSG00000147481|ENST00000642720|SNTG1;REV__ENST00000524004.5_3_8:51571197-51621559:+|nuORF;REV__nc|ENSG00000147481|Q9NSN8-2|SNTG1 18.1463463914782 0.5430639438673815 4 [TA]ADY{I|L} 6 -1 56.471 0.0 0.0 5.1268 0.0 0.0 0.0 464.16571222220944 464.16571222220944 38.5661470985147 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 [TA]ADY{I|L} 5.1268 - 81 + 1 1.725 33521.4 1.0 4047 4540 8588 HBL1_DMSO_200M_050219_2,8589 HBL1_DMSO_200M_050219_2,8589,TAADFCIFGT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8590 46.673 22.0 1829700.0 25 0 178880.0 + 41520 VPNNKITVV 9 72 492.2974984222936 982.5804439113872 2 492.2983276247978 MULTI CID FTMS 0 0 0 8588 2030240.0 0.040896249576381 12 -1.141826629638672 2 Unmodified _VPNNKITVV_ ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 26.88365393820708 0.1891292719743517 4 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 7 3 27.752 0.0 0.0 2.8244 0.0 0.0 0.0 213.12301985788812 213.12301985788812 11.55410404594221 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.7302046884880937 0.0 [VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 2.8244 - 122 1 1.725 37288.5 1.0 4048 4540 8588 HBL1_DMSO_200M_050219_2,8590 HBL1_DMSO_200M_050219_2,8590,VPNNKITVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8591 46.674 21.0 2201500.0 25 0 165480.0 + 31850 RTFEKIEEV 9 72 575.8083841765326 1149.6022154198652 2 575.8090698122978 MULTI CID FTMS 0 0 0 8588 2343255.0 0.39547716519805 -2 0.2196121215820312 3 Unmodified _RTFEKIEEV_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 28.49450938151212 0.1686335738423394 4 V{M(Oxidation (M))|F}E{I|L}KE{[WT]|[RM]}V 9 6 + 62.573 0.0 0.0 5.443 5.443 72.452 0.0 0.0 0.0 39.41245036856159 10.189549981487076 10.189549981487076 1.5051499783199065 0 0.7742275032520141 0.0 0.9247425010840048 0.0 V{M(Oxidation (M))|F}E{I|L}KE{[WT]|[RM]}V;V{M(Oxidation (M))|F}E{I|L}K{[WT]|[RM]}EV;V{M(Oxidation (M))|F}{I|L}EKE{[WT]|[RM]}V;V{M(Oxidation (M))|F}{I|L}EK{[WT]|[RM]}EV;{[ET]|[MV]}R{M(Oxidation (M))|F}K{I|L}EEV;HHT{I|L}KE{[WT]|[RM]}V;{[ET]|[MV]}R{M(Oxidation (M))|F}KE{I|L}EV;HHT{I|L}K{[WT]|[RM]}EV;HHT{I|L}K{M(Oxidation (M))|F}R[DP] 5.443;5.3121;4.8971;4.7661;4.3816;4.3545;3.8357;3.7465;3.6205 -;-;-;-;-;-;-;-;- 164 + 1 1.725 40044.1 1.0 4049 4540 8588 HBL1_DMSO_200M_050219_2,8591 HBL1_DMSO_200M_050219_2,8591,RTFEKIEEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8592 46.679 290.0 686330.0 25 0 164780.0 -1 0 53 1158.140302501088 3471.399078103464 3 1158.475756824017 MULTI CID FTMS 0 0 0 8588 1399316.25 1.0 0 0.0 4 4 {M(Oxidation (M))|F}G 2 -1 8.5835 0.0 0.0 0.24726 0.0 0.0 1797.614606523189 1466.686297741639 3264.300904264828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.24726 - 28 + 1 1.725 165044.9 1.0 4050 4540 8588 HBL1_DMSO_200M_050219_2,8592 HBL1_DMSO_200M_050219_2,8592, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8593 46.681 37.0 1285700.0 25 0 124210.0 + 24998 MPPPPPQGV 9 87 460.23852327962805 918.462493626056 2 460.2386657595634 MULTI CID FTMS 0 0 0 8588 1306992.25 0.0705260633391477 82 -6.657051086425781 5 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 67.03532852164291 0.0222449892513529 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 59.513 0.0 0.0 6.4797 6.4797 88.306 0.0 0.0 0.0 6.549471895720984 40.97485843954192 6.549471895720984 9.262137858390815 0 1.2302046884880935 0.0 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPP[AG]R;{[HG]|PP}MPPPQGV;[VG][EP]HPQR;[PS][HT]PPQR;[HA][DV]PPQR;{[HG]|PP}MPPP[AG]GV;[PS][TP]HPQR;[VG][EP]HP[AG]R;[PS][HT]PP[AG]R 6.4797;5.4712;5.4032;4.8973;4.848;4.5388;4.4007;3.914;3.8889;3.8396 -;-;-;-;-;-;-;-;-;- 225 1 1.725 44108.3 1.0 4051 4540 8588 HBL1_DMSO_200M_050219_2,8593 HBL1_DMSO_200M_050219_2,8593,MPPPPPQGV True True MPPPPPQGV 46.68067 460.238665759563 6921658432.0 8588.0 ENSG00000164754|ENST00000297338|RAD21;;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 7.364579359690349 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8594 46.682 66.0 766340.0 25 0 66258.0 + 3346 AYNPNTQTF 9 90 528.2425945176178 1054.4706361020355 2 528.2432128787041 MULTI CID FTMS 0 0 0 8588 936755.8125 1.0 0 0.0 6 Unmodified _AYNPNTQTF_ ENSG00000174405|ENST00000442234|LIG4 34.10243960390752 0.1078313939113124 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NP 4 5 33.288 0.0 0.0 3.1569 0.0 0.0 0.0 606.2494806667418 606.2494806667418 0.8399935561281069 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NP 3.1569 + + 323 1 1.725 42648.4 1.0 4052 4540 8588 HBL1_DMSO_200M_050219_2,8594 HBL1_DMSO_200M_050219_2,8594,AYNPNTQTF True True AYNPNTQTF 46.682266 528.243212878704 8288041.0 8588.0 ENSG00000174405|ENST00000442234|LIG4 6.499935150146484 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8595 46.683 44.0 1423900.0 25 0 204550.0 + 3373 AYQEAVRTL 9 66 525.7819821158197 1049.5494112984393 2 525.7825805544853 MULTI CID FTMS 0 0 0 8588 893070.1875 0.2152732664873587 -2 0.2196121215820312 7 Unmodified _AYQEAVRTL_ ENSG00000127666|ENST00000248244|TICAM1 55.50274090549119 0.0285720310785888 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEAVRT{I|L} 9 0 + 74.382 0.0 0.0 7.087 7.087 89.714 0.0 0.0 0.0 64.20101188398291 7.54518683222247 7.54518683222247 9.208187539523747 0 1.2302046884880935 2.0 1.174742501084005 0.3807196863200844 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEAVRT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]EAVRT{I|L} 7.087;6.2097 +;- + 87 + 1 1.725 54836.7 1.0 4053 4540 8588 HBL1_DMSO_200M_050219_2,8595 HBL1_DMSO_200M_050219_2,8595,AYQEAVRTL True True AYQEAVRTL 46.683487 525.782580554485 61752976.0 8588.0 ENSG00000127666|ENST00000248244|TICAM1 6.728784720102946 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8596 46.685 76.0 766490.0 25 0 54588.0 + 4910 DGKVSVHVI 9 86 477.27445610099153 952.5343592687832 2 477.2745239138603 MULTI CID FTMS 0 0 0 8588 684990.4375 0.8582036013106268 -1 0.116302490234375 8 Unmodified _DGKVSVHVI_ ENSG00000169710|ENST00000306749|FASN 43.77239144664712 0.0547478964384323 4 HVSVDGG 7 6 39.312 0.0 0.0 4.1271 0.0 0.0 230.16186376010427 68.05140863590077 298.21327239600504 0.0 0.0 0.0 0.0 0 2.268930178484529 0.0 0.7887254899964358 0.0 HVSVDGG 4.1271 - 284 + 1 1.725 50469.1 1.0 4054 4540 8588 HBL1_DMSO_200M_050219_2,8596 HBL1_DMSO_200M_050219_2,8596,DGKVSVHVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8597 46.688 114.0 872840.0 25 0 50697.0 + 31851 RTFEKIEEV 9 104 384.208173008248 1149.602689624944 3 384.2082092165947 MULTI CID FTMS 0 0 0 8588 608659.4375 0.3578094117583085 -1 0.116302490234375 9 Unmodified _RTFEKIEEV_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 23.78978130925829 0.2284941198415988 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}EK{I|L}EEV 9 0 + 46.533 0.0 0.0 4.0477 4.0477 66.698 0.0 0.0 0.0 1.4165061435177506 1.4165061435177506 1.4165061435177506 1.4165061435177506 0 0.3182503180159344 0.0 0.9247425010840048 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}EK{I|L}EEV;HHT{I|L}KERMV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}EK{I|L}TQQ;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}EKE{I|L}EV;HHT{I|L}KEVGMV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}TR{I|L}EEV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{M(Oxidation (M))|F}K{I|L}EEV;[{M(Oxidation (M))|F}V]E{I|L}RTRMV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{M(Oxidation (M))|F}K{I|L}TQQ;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}TRE{I|L}EV 4.0477;3.9245;3.8402;3.7204;3.7071;3.6327;3.524;3.4401;3.3165;3.3054 +;-;-;-;-;-;-;-;-;- + 1021 1 1.725 89069.1 1.0 4055 4540 8588 HBL1_DMSO_200M_050219_2,8597 HBL1_DMSO_200M_050219_2,8597,RTFEKIEEV False True RTFEKIEEV 46.68761 384.208209216595 82290038.0 8588.0 nc|ENSG00000105486|P18858-2|LIG1;;ENSG00000105486|ENST00000263274|LIG1;;nc|ENSG00000105486|P18858-3|LIG1 5.264133373896281 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8598 46.69 125.0 486860.0 25 0 34617.0 + 10480 FTPNNIKQV 9 92 530.7926429153092 1059.5707328974183 2 530.7933227419853 MULTI CID FTMS 0 0 0 8588 418208.34375 1.0 0 0.0 10 Unmodified _FTPNNIKQV_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62496043-62497015:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5 39.957323273325 0.0756908302845263 4 [{M(Oxidation (M))|F}T]PN{[QV]|[N{I|L}]|[RA]|[KV]}KQV 9 0 + 32.194 0.0 0.0 3.0384 3.0384 65.814 0.0 0.0 0.0 6.682437647924221 2.430380486862944 2.430380486862944 2.430380486862944 0 0.4247425010840047 0.0 0.0 0.7134679910804405 + + [{M(Oxidation (M))|F}T]PN{[QV]|[N{I|L}]|[RA]|[KV]}KQV;[{M(Oxidation (M))|F}T]PN{[QV]|[N{I|L}]|[RA]|[KV]}KN{I|L};[{M(Oxidation (M))|F}T]PGG{[QV]|[N{I|L}]|[RA]|[KV]}KQV;[{M(Oxidation (M))|F}T]PGG{[QV]|[N{I|L}]|[RA]|[KV]}KN{I|L};[{M(Oxidation (M))|F}T]PN{[QV]|[N{I|L}]|[RA]|[KV]}K[AG]V;[{M(Oxidation (M))|F}T]P[{I|L}A]{[RE]|[WV]}QV;{[QV]|[N{I|L}]|[RA]|[KV]}[R{M(Oxidation (M))|F}][{I|L}A]P{[ET]|[MV]};[{M(Oxidation (M))|F}T]PN{[QV]|[N{I|L}]|[RA]|[KV]}KGG{I|L};[{M(Oxidation (M))|F}T]P[{I|L}A]{[RE]|[WV]}N{I|L} 3.0384;2.8091;2.1694;1.94;1.8969;1.837;1.8003;1.6675;1.6076 +;-;-;-;-;-;-;-;- + 181 + 1 1.725 54471.5 1.0 4056 4540 8588 HBL1_DMSO_200M_050219_2,8598 HBL1_DMSO_200M_050219_2,8598,FTPNNIKQV True True FTPNNIKQV 46.690189 530.793322741985 3427360.5 8588.0 ENST00000581230.5_1_17:62496043-62497015:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5 6.458494822184245 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8599 46.693 135.0 747210.0 25 0 193200.0 + 45804 YYLVKREDY 9 71 416.8799924949912 1247.6181480851735 3 416.8799011111259 MULTI CID FTMS 0 0 0 8588 408311.375 0.2533361512032822 -2 0.2196121215820312 11 Unmodified _YYLVKREDY_ ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 30.7034409873982 0.1405282614900322 4 YY{I|L}VK 5 4 69.68 0.0 0.0 5.5851 0.0 0.0 0.0 578.2257642230305 578.2257642230305 56.18562527100117 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 1.1237125054200234 + YY{I|L}VK 5.5851 + + 124 + 1 1.725 85226.2 1.0 4057 4540 8588 HBL1_DMSO_200M_050219_2,8599 HBL1_DMSO_200M_050219_2,8599,YYLVKREDY False True YYLVKREDY 46.692924 416.879901111126 41842336.0 8588.0 ENSG00000151366|ENST00000281031|NDUFC2;;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 4.854278326034546 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8600 46.703 603.0 228260.0 25 0 43840.0 -1 NSDERDCEMR 10 107 635.7408348858222 1269.4671168384443 2 635.7418090701103 MULTI CID FTMS 0 0 0 8588 349924.96875 0.6320421630907799 1 -0.1117744445800781 12 Oxidation (M) _NSDERDCEM(Oxidation (M))R_ ENSG00000081479|ENST00000649046|LRP2 3.2813086475875832 0.7114585191678878 4 DD{[{M(Oxidation (M))|F}C]|[YS]}EK{M(Oxidation (M))|F}{I|L}R 9 -1 42.674 0.0 0.0 3.3616 0.0 0.0 97.9740195247701 0.0 97.9740195247701 0.0 31.2472939463698 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.5356668758921829 DD{[{M(Oxidation (M))|F}C]|[YS]}EK{M(Oxidation (M))|F}{I|L}R 3.3616 - 288 + 1 1.725 104811.9 1.0 4058 4540 8588 HBL1_DMSO_200M_050219_2,8600 HBL1_DMSO_200M_050219_2,8600,NSDERDCEMR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8601 46.708 250.0 469820.0 25 0 44340.0 + 45806 YYLVKREDY 9 66 624.8165305604973 1247.6185081877943 2 624.8167602419853 MULTI CID FTMS 0 0 0 8588 336255.875 0.318887242848308 -2 0.2196121215820312 13 Unmodified _YYLVKREDY_ ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 46.0223103267499 0.0490911897871712 4 YY{I|L}VK{[RE]|[WV]}DY 9 0 + 89.619 0.0 0.0 7.1832 7.1832 95.497 0.0 0.0 0.0 69.32889097984422 13.46787486224656 13.46787486224656 70.56810945375766 0 1.3494850021680094 2.0 0.805462187404089 0.4247425010840047 + + YY{I|L}VK{[RE]|[WV]}DY;{[QV]|[N{I|L}]|[RA]|[KV]}[WD]V{I|L}YYY 7.1832;1.527 +;- + 161 + 1 1.725 92903.9 1.0 4059 4540 8588 HBL1_DMSO_200M_050219_2,8601 HBL1_DMSO_200M_050219_2,8601,YYLVKREDY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8602 46.712 191.0 531400.0 25 0 49919.0 -1 0 101 336.7238045170618 671.4330561009236 2 336.7236511111259 MULTI CID FTMS 0 0 0 8588 331770.84375 0.2636644140371916 2 -0.1913108825683593 14 4 {[VA]|[{I|L}G]}{I|L}{I|L} 4 -1 35.802 0.0 0.0 5.3322 0.0 0.0 0.0 272.1379793756469 272.1379793756469 25.71333751784365 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}{I|L} 5.3322 - 28 + 1 1.725 85584.4 1.0 4060 4540 8588 HBL1_DMSO_200M_050219_2,8602 HBL1_DMSO_200M_050219_2,8602, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8603 46.718 331.0 415830.0 25 0 43987.0 + 10003 FPKRRELQI 9 115 396.2396886077638 1185.6972364234914 3 396.2397338747978 MULTI CID FTMS 0 0 0 8588 272499.96875 0.7779437748209369 -1 0.116302490234375 15 Unmodified _FPKRRELQI_ ENSG00000126391|ENST00000317568|FRMD8;nc|ENSG00000126391|Q9BZ67-2|FRMD8;nc|ENSG00000126391|Q9BZ67-3|FRMD8 21.59015148037692 0.2564810811560323 4 {I|L}MK 3 8 29.201 0.0 0.0 2.4627 0.0 0.0 0.0 810.440933331219 810.440933331219 8.231457247781648 0.0 0.0 0.0 0 0.3494850021680094 1.154901959985743 0.0 0.0 {I|L}MK 2.4627 - 46 + 1 1.725 111451.3 1.0 4061 4540 8588 HBL1_DMSO_200M_050219_2,8603 HBL1_DMSO_200M_050219_2,8603,FPKRRELQI False True FPKRRELQI 46.717814 396.239733874798 5171189.5 8588.0 nc|ENSG00000126391|Q9BZ67-3|FRMD8;;ENSG00000126391|ENST00000317568|FRMD8;;nc|ENSG00000126391|Q9BZ67-2|FRMD8 3.538269360860189 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8604 46.73 695.0 168570.0 25 0 12352.0 + -1 GVDLQEMVCA 10 149 569.2485632693979 1136.4825736055957 2 569.2497436404228 MULTI CID FTMS 0 0 0 8588 257716.90625 1.0 0 0.0 16 Carbamidomethyl (C),Oxidation (M) _GVDLQEM(Oxidation (M))VC(Carbamidomethyl (C))A_ REV__ENSG00000095564|ENST00000265990|BTAF1 22.736283301280096 0.4578556481593033 4 [QP]SVTEC{[MS]|[{M(Oxidation (M))|F}A]}[VG] 11 -1 + 50.565 0.0 0.0 4.4492 4.4492 80.936 0.0 0.0 0.0 11.296905512112112 19.61745889055948 11.296905512112112 11.03972334353859 0 0.0 0.958607314841775 1.774227503252014 0.3807196863200844 [QP]SVTEC{[MS]|[{M(Oxidation (M))|F}A]}[VG];[QP][PA]T{M(Oxidation (M))|F}C{[MS]|[{M(Oxidation (M))|F}A]}R;[VG]VQEEC{[MS]|[{M(Oxidation (M))|F}A]}[VG];[PA]GSVTEC{[MS]|[{M(Oxidation (M))|F}A]}[VG];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VT{M(Oxidation (M))|F}C{[MS]|[{M(Oxidation (M))|F}A]}R;[NP]TVTEC{[MS]|[{M(Oxidation (M))|F}A]}[VG];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VTES[HD][VG];[VS][QP]TEC{[MS]|[{M(Oxidation (M))|F}A]}[VG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YG]ETV{M(Oxidation (M))|F}{M(Oxidation (M))|F};[PA]G[PA]T{M(Oxidation (M))|F}C{[MS]|[{M(Oxidation (M))|F}A]}R 4.4492;3.4778;3.3818;2.8849;2.5798;2.5231;2.4435;2.1106;2.0299;1.9103 -;-;-;-;-;-;-;-;-;- 802 1 1.725 95713.4 1.0 4062 4540 8588 HBL1_DMSO_200M_050219_2,8604 HBL1_DMSO_200M_050219_2,8604,GVDLQEMVCA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8605 46.736 296.0 514850.0 25 0 46281.0 + 26819 PAPPPPQPL 9 154 457.2606688128342 912.5067846924684 2 457.2606078982353 MULTI CID FTMS 0 0 0 8588 253669.53125 0.2962263101607713 -6 0.5574111938476562 17 Unmodified _PAPPPPQPL_ ENST00000317173.8_1_8:9911977-10102635:+|nuORF;ENST00000441698.6_1_8:9911977-10065409:+|nuORF 74.39630413441286 0.0193995060682538 4 [PA]PPPPG{M(Oxidation (M))|F} 8 3 60.628 0.0 0.0 6.6441 0.0 0.0 0.0 149.09483335873713 149.09483335873713 29.816246431111576 0.0 0.0 0.0 0 1.6549471895720984 1.6989700043360187 0.0 0.0 [PA]PPPPG{M(Oxidation (M))|F} 6.6441 - 1635 1 1.725 119379.6 1.0 4063 4540 8588 HBL1_DMSO_200M_050219_2,8605 HBL1_DMSO_200M_050219_2,8605,PAPPPPQPL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8606 46.75 800.0 171080.0 25 0 8149.2 + 31554 RQLEQTNYRL 10 150 440.9051976238121 1319.6937634716364 3 440.9055053591728 MULTI CID FTMS 0 0 0 8588 191957.984375 1.0 0 0.0 18 Unmodified _RQLEQTNYRL_ ENSG00000172936|ENST00000650905|MYD88;ENST00000416282.2_1_3:38180152-38182096:+|nuORF;ENST00000481122.5_1_3:38180729-38182774:+|nuORF;ENST00000484513.1_1_3:38181817-38182096:+|nuORF;nc|ENSG00000172936|Q99836-2|MYD88;nc|ENSG00000172936|Q99836-5|MYD88;nc|ENSG00000172936|Q99836-6|MYD88 46.4752305370441 0.1008384395814411 4 [AG]R{I|L}EQTNYR{I|L} 11 3 [AG]R{I|L}E + + 44.346 27.69 5.2613 3.3603 3.3603 46.806 0.0 0.0 0.0 0.0 7.627881306118454 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 1.1505149978319906 [AG]R{I|L}EQTNYR{I|L} 3.3603 - 1514 + 1 1.725 113142.8 0.8199999928474426 4064 4540 8588 HBL1_DMSO_200M_050219_2,8606 HBL1_DMSO_200M_050219_2,8606,RQLEQTNYRL True True RQLEQTNYRL 46.750289 440.905505359173 1064716.625 8588.0 ENST00000481122.5_1_3:38180729-38182774:+|nuORF;;nc|ENSG00000172936|Q99836-2|MYD88;;nc|ENSG00000172936|Q99836-6|MYD88;;ENSG00000172936|ENST00000650905|MYD88;;ENST00000416282.2_1_3:38180152-38182096:+|nuORF;;ENST00000484513.1_1_3:38181817-38182096:+|nuORF;;nc|ENSG00000172936|Q99836-5|MYD88 5.699556509653728 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8607 46.764 800.0 201670.0 25 0 20358.0 + 16371 IYQEIRNTDM 10 117 641.80808289984 1281.60161286648 2 641.8080322146416 MULTI CID FTMS 0 0 0 8588 171078.515625 1.0 0 0.0 19 Unmodified _IYQEIRNTDM_ ENSG00000187735|ENST00000521604|TCEA1;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;nc|ENSG00000187735|P23193-2|TCEA1 88.36371040165146 0.0102134265615327 4 {I|L}YQE{I|L}{[QS]|[NT]}EAAM 11 4 + 93.779 0.0 0.0 7.3173 7.3173 81.228 0.0 0.0 0.0 25.32516055786093 2.500551404457412 2.500551404457412 2.500551404457412 0 1.6989700043360187 2.0 1.411954370472159 0.75 {I|L}YQE{I|L}{[QS]|[NT]}EAAM;{I|L}YQE{I|L}{[QS]|[NT]}EC(Carbamidomethyl (C)){I|L};{I|L}YQE{I|L}{[QS]|[NT]}[VG]DM;{I|L}YQE{[QS]|[NT]}{I|L}EAAM;{I|L}YQE{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}AAM;{I|L}YQE{[QS]|[NT]}{I|L}EC(Carbamidomethyl (C)){I|L};{I|L}YQE{[QS]|[NT]}{I|L}[VG]DM;{I|L}YQE{[QS]|[NT]}E{I|L}AAM;{I|L}YQE{[QS]|[NT]}[R{I|L}]DM;{I|L}YQE{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}C(Carbamidomethyl (C)){I|L} 7.3173;7.1222;7.0824;6.9083;6.7908;6.7132;6.6734;6.6356;6.6301;6.5957 -;-;-;-;-;-;-;-;-;- 6888 + 1 1.725 127774.6 0.800000011920929 4065 4540 8588 HBL1_DMSO_200M_050219_2,8607 HBL1_DMSO_200M_050219_2,8607,IYQEIRNTDM True True IYQEIRNTDM 46.764132 641.808032214642 1915454.75 8588.0 nc|ENSG00000187735|P23193-2|TCEA1;;ENSG00000187735|ENST00000521604|TCEA1;;ENST00000521086.6_1_8:54891227-54912595:-|nuORF 6.002474149068196 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8608 46.779 800.0 172510.0 25 0 9627.8 + 9674 FLQEKSPAV 9 172 509.7825520399593 1017.5505511467186 2 509.7817565798759 MULTI CID FTMS 0 0 0 8588 93040.671875 0.9835649462492584 -1 0.116302490234375 20 Unmodified _FLQEKSPAV_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 47.74868867922204 0.0453060283459952 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEKSAPV 9 2 + 43.209 0.0 0.0 4.2464 4.2464 71.047 0.0 0.0 0.0 3.2220242309082607 3.2220242309082607 3.2220242309082607 3.2220242309082607 0 1.0356668758921828 0.0 0.5 0.3807196863200844 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEKSAPV;[{I|L}T]ASKEQ{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEKSPAV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEKSPG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEKSAVP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEK[PG]TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]EKSAPV;[TA]{I|L}SKEQ{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEK[PG]S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEKS{I|L}GP 4.2464;3.9297;3.9078;3.785;3.3589;3.3588;3.3414;3.3143;3.2361;3.2089 -;-;+;-;-;-;-;-;-;- + 1931 + 1 1.725 112083.0 0.6700000166893005 4066 4540 8588 HBL1_DMSO_200M_050219_2,8608 HBL1_DMSO_200M_050219_2,8608,FLQEKSPAV True True FLQEKSPAV 46.77912 509.781756579876 931546.75 8588.0 nc|ENSG00000143569|Q14157-1|UBAP2L;;nc|ENSG00000143569|Q14157-4|UBAP2L;;nc|ENSG00000143569|Q14157-5|UBAP2L;;nc|ENSG00000143569|Q14157-3|UBAP2L;;ENSG00000143569|ENST00000428931|UBAP2L 6.007185618082683 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8610 46.784 16.0 2991500.0 25 0 251090.0 + 16847 KIDEHHFVAV 10 64 398.88014628086455 1193.6186094427935 3 398.8803893923759 MULTI CID FTMS 0 0 0 8609 2862398.75 0.551593868795602 1 -0.0795364379882812 1 Unmodified _KIDEHHFVAV_ ENSG00000149313|ENST00000278618|AASDHPPT 18.373094154950223 0.5392593366289069 4 {M(Oxidation (M))|F}H{M(Oxidation (M))|F}VAV 6 5 28.321 0.0 0.0 2.3727 0.0 0.0 475.23832900215 0.0 475.23832900215 0.0 11.33085333508717 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.0 {M(Oxidation (M))|F}H{M(Oxidation (M))|F}VAV 2.3727 - 65 1 1.722 47500.6 1.0 4067 4541 8609 HBL1_DMSO_200M_050219_2,8610 HBL1_DMSO_200M_050219_2,8610,KIDEHHFVAV False True KIDEHHFVAV 46.783551 398.880389392376 96384332.0 8609.0 ENSG00000149313|ENST00000278618|AASDHPPT 8.959222634633383 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8611 46.785 68.0 823110.0 25 0 45678.0 + 16849 KIDEHHFVAV 10 80 597.8167551379751 1193.61895734275 2 597.8172485232353 MULTI CID FTMS 0 0 0 8609 907210.9375 0.5553534382280815 1 -0.0795364379882812 2 Unmodified _KIDEHHFVAV_ ENSG00000149313|ENST00000278618|AASDHPPT 23.78978130925829 0.4341852049148378 4 QH{M(Oxidation (M))|F}VAV 6 5 54.056 0.0 0.0 4.5287 0.0 0.0 494.2371388166032 0.0 494.2371388166032 0.0 39.36283990585396 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.6989700043360187 QH{M(Oxidation (M))|F}VAV 4.5287 - 189 1 1.722 49182.1 1.0 4068 4541 8609 HBL1_DMSO_200M_050219_2,8611 HBL1_DMSO_200M_050219_2,8611,KIDEHHFVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8612 46.786 18.0 3810700.0 25 0 635340.0 + 34892 SQIDPSSIERA 11 60 601.8039149111047 1201.5932768890093 2 601.8038207888603 MULTI CID FTMS 0 0 0 8609 2578023.5 0.3759216503597434 -3 0.3313865661621094 3 Unmodified _SQIDPSSIERA_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 42.83518252547288 0.1687213420692654 4 {[QS]|[NT]}{I|L}DPS 6 5 55.986 0.0 0.0 4.6594 0.0 0.0 0.0 571.2862032525999 571.2862032525999 52.88750309660614 0.0 0.0 0.0 0 1.424742501084005 1.3010299956639813 0.3807196863200844 0.0 + {[QS]|[NT]}{I|L}DPS 4.6594 + + 50 + 1 1.722 54108.3 1.0 4069 4541 8609 HBL1_DMSO_200M_050219_2,8612 HBL1_DMSO_200M_050219_2,8612,SQIDPSSIERA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8613 46.788 79.0 1690400.0 25 0 344410.0 -1 0 75 966.4323678807548 1930.8501828283097 2 966.4333373904228 MULTI CID FTMS 0 0 0 8609 1344760.25 0.9401802426621844 1 -0.0795364379882812 4 4 {I|L}EPQNT 6 -1 29.761 0.0 0.0 1.5413 0.0 0.0 965.326270330066 280.1678255670532 1245.4940958971192 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.805462187404089 {I|L}EPQNT 1.5413 - 276 + 1 1.722 94917.7 1.0 4070 4541 8609 HBL1_DMSO_200M_050219_2,8613 HBL1_DMSO_200M_050219_2,8613, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8614 46.79 50.0 1593900.0 25 0 309890.0 -1 LPIQRACKL 9 68 366.8857699151943 1097.635480345783 3 366.8854553103447 MULTI CID FTMS 0 0 0 8609 1004351.6875 0.4396654711063312 -2 0.2280769348144531 5 Carbamidomethyl (C) _LPIQRAC(Carbamidomethyl (C))KL_ ENST00000231368.9_1_5:96364258-96364480:+|nuORF 17.11289562659939 0.3734572693229295 4 {I|L}{I|L} 2 -1 20.969 0.0 0.0 1.9104 0.0 0.0 0.0 868.4445291300019 868.4445291300019 6.989700043360188 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 1.9104 - 28 + 1 1.722 68995.5 1.0 4071 4541 8609 HBL1_DMSO_200M_050219_2,8614 HBL1_DMSO_200M_050219_2,8614,LPIQRACKL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8615 46.791 69.0 758300.0 25 0 57819.0 + 12154 GQMDPSAQI 9 97 473.7183474638989 945.4221419945976 2 473.7187377810478 MULTI CID FTMS 0 0 0 8609 910842.9375 0.7169179706581621 1 -0.0795364379882812 6 Unmodified _GQMDPSAQI_ ENSG00000164880|ENST00000404767|INTS1;ENST00000493446.1_1_7:1510215-1510538:-|nuORF 53.832793166522166 0.0319663582346103 4 [AG]GMD[PS]AQ{I|L} 10 2 + 43.765 0.0 0.0 4.6291 4.6291 75.504 0.0 0.0 0.0 5.427965835756432 10.452490459521968 5.427965835756432 5.427965835756432 0 1.0682503180159344 1.3979400086720375 0.5 0.0 [AG]GMD[PS]AQ{I|L};{[QG]|[NA]}MD[PS]AQ{I|L};[AG]G[TP][EC]AQ{I|L};[PS]AQ[EC]AQ{I|L};[AG]A[PS][EC]AQ{I|L};[AG]A[EC][PS]AQ{I|L};[AG][MD]G[PS]AQ{I|L};{[QG]|[NA]}[TP][EC]AQ{I|L};[VG]C(Carbamidomethyl (C))D[PS]AQ{I|L};[AG]G[TP]D{[MG]|[TS]}Q{I|L} 4.6291;4.055;3.338;3.0367;2.5987;2.5433;2.4595;2.3942;2.3934;2.3045 -;+;-;-;-;-;-;-;-;- + 203 1 1.722 44453.9 1.0 4072 4541 8609 HBL1_DMSO_200M_050219_2,8615 HBL1_DMSO_200M_050219_2,8615,GQMDPSAQI True True GQMDPSAQI 46.791138 473.718737781048 16983392.0 8609.0 ENST00000493446.1_1_7:1510215-1510538:-|nuORF;;ENSG00000164880|ENST00000404767|INTS1 7.460720062255859 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8616 46.793 55.0 806860.0 25 0 73256.0 + 12958 HAHAQIPVV 9 75 486.2737903989693 970.5330278647386 2 486.2740051150322 MULTI CID FTMS 0 0 0 8609 585189.5 0.6064056240674918 2 -0.1631431579589843 7 Unmodified _HAHAQIPVV_ ENSG00000112701|ENST00000447266|SENP6;ENST00000487548.2_1_6:76343389-76344528:+|nuORF;nc|ENSG00000112701|Q9GZR1-2|SENP6 11.640296217721598 0.521594087909532 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WN]|[YH]}{I|L}PVV 8 4 + 33.874 0.0 0.0 3.4902 3.4902 79.122 0.0 0.0 0.0 12.67606240177031 22.491596866368013 12.67606240177031 15.952205667976568 0 0.5 1.5228787452803376 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WN]|[YH]}{I|L}PVV;[QA]H[HA]{I|L}PVV;[HA]Q[HA]{I|L}PVV;[VP]{[C(Carbamidomethyl (C))E]|[WC]}[R{I|L}]VV;[HA][AG][HA]{I|L}PVV 3.4902;1.8466;1.7868;1.5347;0.83806 -;-;-;-;- 60 1 1.722 40269.3 1.0 4073 4541 8609 HBL1_DMSO_200M_050219_2,8616 HBL1_DMSO_200M_050219_2,8616,HAHAQIPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8617 46.794 81.0 728520.0 25 0 103750.0 + 23199 LSSHALSSL 9 97 457.7489013800235 913.483249826847 2 457.7488586306572 MULTI CID FTMS 0 0 0 8609 468053.5625 0.6848190306694867 -1 0.1117744445800781 8 Unmodified _LSSHALSSL_ REV__ENST00000474157.1_1_7:23286476-23286758:+|nuORF 34.10243960390752 0.1078313939113124 4 {[TV]|[{I|L}S]}[HV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TV 8 -1 + 34.995 0.0 0.0 3.831 3.831 64.879 0.0 0.0 0.0 2.280156171532184 0.7062548319544248 0.7062548319544248 0.7918124604762511 0 0.3807196863200844 2.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}[HV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TV;{[TV]|[{I|L}S]}[HV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{I|L};{[TV]|[{I|L}S]}[HA]S{[TV]|[{I|L}S]}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}YPP[QP]{I|L};{[TV]|[{I|L}S]}QQT[QP]{I|L};{[TV]|[{I|L}S]}[VG]T[HT]{[TV]|[{I|L}S]};[HV]S{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TV;[HV]S{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{I|L};[HV]VT{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TV;[HV]VT{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{I|L} 3.831;3.7443;3.576;3.4896;2.9464;2.1454;2.096;2.0094;1.9593;1.8726 -;-;-;-;-;-;-;-;-;- 534 + 1 1.722 51004.2 1.0 4074 4541 8609 HBL1_DMSO_200M_050219_2,8617 HBL1_DMSO_200M_050219_2,8617,LSSHALSSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8618 46.798 189.0 551740.0 25 0 86422.0 + + 17959 KTQDLFRRV 9 110 388.22806432635343 1161.6623635792605 3 388.2281066775322 MULTI CID FTMS 0 0 0 8609 303983.125 0.832140472561921 1 -0.0795364379882812 9 Unmodified _KRFQNTIKQ_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1 10.799506525563784 0.5443532743200366 4 KV{M(Oxidation (M))|F}D{I|L}[TA]P 8 -1 36.336 0.0 0.0 3.1279 0.0 0.0 0.0 287.1620272272094 287.1620272272094 25.95733421148136 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 KV{M(Oxidation (M))|F}D{I|L}[TA]P 3.1279 - 141 + 1 1.722 83890.2 1.0 4075 4541 8609 HBL1_DMSO_200M_050219_2,8618 HBL1_DMSO_200M_050219_2,8618,KRFQNTIKQ False False KTQDLFRRV 46.797988 388.228106677532 2941833.5 8609.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 4.010642806688945 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8619 46.803 245.0 380690.0 25 0 23467.0 + 25318 NAGPPSHII 9 117 453.2453106751012 904.4760684170024 2 453.2457153201103 MULTI CID FTMS 0 0 0 8609 297238.0 0.27054790779974 7 -0.681488037109375 10 Unmodified _NAGPPSHII_ ENSG00000132128|ENST00000617190|LRRC41;nc|ENSG00000132128|Q15345-3|LRRC41 34.10243960390752 0.1078313939113124 4 {[QG]|[NA]}GKYK[QP] 8 6 + 47.03 0.0 0.0 5.1997 5.1997 80.533 0.0 0.0 0.0 6.08283746139692 36.19234324501814 6.08283746139692 8.096870547007661 0 1.0 2.0 0.0 0.6307196863200843 {[QG]|[NA]}GKYK[QP];{[QG]|[NA]}GP[PS]H{I|L}{I|L};GGAGKYK[QP];{[QN]|[E{I|L}]|[KN]}KYK[QP];GGQKYK[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}K{[C(Carbamidomethyl (C))E]|[WC]}{I|L}{I|L} 5.1997;4.3045;2.3514;2.0379;1.8361;0.54517 -;+;-;-;-;- + 174 1 1.722 75833.5 1.0 4076 4541 8609 HBL1_DMSO_200M_050219_2,8619 HBL1_DMSO_200M_050219_2,8619,NAGPPSHII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8620 46.808 324.0 380540.0 25 0 53825.0 + 13141 HFIRPGNAL 9 123 512.7875829619853 1023.5606129907708 2 512.7878906130791 MULTI CID FTMS 0 0 0 8609 289523.9375 0.623288587280905 -1 0.1117744445800781 11 Unmodified _HFIRPGNAL_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 46.020951573049366 0.0490941689151868 4 H{M(Oxidation (M))|F}{I|L}R 4 5 43.047 0.0 0.0 4.2057 0.0 0.0 0.0 467.22687708072505 467.22687708072505 17.285152422776946 0.0 0.0 0.0 0 1.110924374808178 0.0 0.0 0.0 + H{M(Oxidation (M))|F}{I|L}R 4.2057 + + 368 + 1 1.722 95692.2 1.0 4077 4541 8609 HBL1_DMSO_200M_050219_2,8620 HBL1_DMSO_200M_050219_2,8620,HFIRPGNAL True True HFIRPGNAL 46.808455 512.787890613079 4404229.5 8609.0 nc|ENSG00000083520|Q9Y2L1-2|DIS3;;ENSG00000083520|ENST00000377767|DIS3 5.406120777130127 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8621 46.811 139.0 345990.0 25 0 35702.0 + -1 VYIEHRLMM 9 82 403.2037051933849 1206.5892861803547 3 403.2035095095634 MULTI CID FTMS 0 0 0 8609 208788.40625 1.0 0 0.0 12 Oxidation (M) _VYIEHRLMM(Oxidation (M))_ nc|ENSG00000166508|P33993-2|MCM7;ENSG00000166508|ENST00000303887|MCM7 23.78978130925829 0.2284941198415988 4 V[Y{I|L}]EHY[PG]{I|L} 9 -1 28.389 0.0 0.0 2.3529 0.0 0.0 0.0 132.04587732486564 132.04587732486564 9.18121238009022 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 V[Y{I|L}]EHY[PG]{I|L} 2.3529 - 145 + 1 1.722 40461.7 1.0 4078 4541 8609 HBL1_DMSO_200M_050219_2,8621 HBL1_DMSO_200M_050219_2,8621,VYIEHRLMM False False VYIEHRLMM 46.811255 403.203509509563 1208927.125 8609.0 nc|ENSG00000166508|P33993-2|MCM7;;ENSG00000166508|ENST00000303887|MCM7 2.0429780681928 3.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8622 46.816 281.0 411970.0 25 0 35089.0 -1 SLMSSMKSI 9 149 508.2455437902177 1014.4765346472354 2 508.2466613650322 MULTI CID FTMS 0 0 0 8609 200446.5 0.8546194276358776 -1 0.1117744445800781 13 2 Oxidation (M) _SLM(Oxidation (M))SSM(Oxidation (M))KSI_ ENSG00000198216|ENST00000367573|CACNA1E;nc|ENSG00000198216|Q15878-2|CACNA1E;nc|ENSG00000198216|Q15878-3|CACNA1E 21.74664581756881 0.2544899275067181 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HHAAQS 8 -1 29.522 0.0 0.0 2.9101 0.0 0.0 0.0 146.08210040334794 146.08210040334794 3.8705431022670247 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.8252574989159953 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HHAAQS 2.9101 - 1465 1 1.722 92340.0 1.0 4079 4541 8609 HBL1_DMSO_200M_050219_2,8622 HBL1_DMSO_200M_050219_2,8622,SLMSSMKSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8623 46.821 232.0 237450.0 25 0 13366.0 + 2195 AQAPDLQRV 9 104 499.2752934315517 0 499.2751037478447 PEAK CID FTMS 0 0 0 8609 167134.234375 0.6675115563105625 1 -0.0795364379882812 14 Unmodified _AQAPDLQRV_ ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 11.494710602746466 0.2951255534130184 4 APD 3 6 19.297 0.0 0.0 1.9364 0.0 0.0 199.0962889121284 511.3007906549437 710.3970795670721 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + APD 1.9364 + + 50 + 1 1.722 49114.0 1.0 4080 4541 8609 HBL1_DMSO_200M_050219_2,8623 HBL1_DMSO_200M_050219_2,8623,AQAPDLQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8624 46.835 800.0 166420.0 25 0 15498.0 -1 0 79 977.4235111324008 1952.8324693316013 2 977.926806628704 MULTI CID FTMS 0 0 0 8609 144404.0 1.0 0 0.0 15 4 Q 1 -1 7.6587 0.0 0.0 0.39218 0.0 0.0 1326.4935471318138 495.2578829401001 1821.751430071913 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 Q 0.39218 - 14 + 1 1.722 95250.2 0.6299999952316284 4081 4541 8609 HBL1_DMSO_200M_050219_2,8624 HBL1_DMSO_200M_050219_2,8624, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8625 46.848 800.0 157470.0 25 0 9095.7 + -1 GQMDPSAQI 9 171 481.7154733391288 961.4163937450576 2 481.7157470583916 MULTI CID FTMS 0 0 0 8609 116410.5859375 1.0 0 0.0 16 Oxidation (M) _GQM(Oxidation (M))DPSAQI_ ENST00000493446.1_1_7:1510215-1510538:-|nuORF;ENSG00000164880|ENST00000404767|INTS1 27.628801355627647 0.1796483985696185 4 QRQ{I|L} 4 -1 23.303 0.0 0.0 2.4238 0.0 0.0 418.1033577116576 0.0 418.1033577116576 0.0 9.377082989249915 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 QRQ{I|L} 2.4238 - 358 + 1 1.722 98032.9 0.6899999976158142 4082 4541 8609 HBL1_DMSO_200M_050219_2,8625 HBL1_DMSO_200M_050219_2,8625,GQMDPSAQI False False GQMDPSAQI 46.848459 481.715747058392 1139721.5 8609.0 ENST00000493446.1_1_7:1510215-1510538:-|nuORF;;ENSG00000164880|ENST00000404767|INTS1 4.906673669815064 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8626 46.859 579.0 436550.0 25 0 66751.0 + 45918 YYVDTAVRHV 10 173 408.2117358156732 1221.6133780472196 3 408.5470458865166 MULTI CID FTMS 0 0 0 8609 111829.4765625 0.439776914074086 -2 0.2280769348144531 17 Unmodified _YYVDTAVRHV_ ENSG00000149273|ENST00000531188|RPS3;nc|ENSG00000149273|P23396-2|RPS3 38.17557092003332 0.1768326257063233 4 YYVDTAVRHV 10 0 + 68.904 0.0 0.0 5.6404 5.6404 86.366 0.0 0.0 0.0 32.66409091536056 11.09059078915761 11.09059078915761 12.526423754976108 0 0.3807196863200844 2.0 0.3494850021680094 0.5138793319624578 + + YYVDTAVRHV;QE[PA]DTAVRHV;YYVD{[HG]|PP}VRT{I|L};YYVDV[TA]RHV;K[C(Carbamidomethyl (C))H]DTAVRHV;YYVVD[TA]RHV;QE[PA]D{[HG]|PP}VRT{I|L};YY[HA]EAVRT{I|L};QE[PA]D[RH]RT{I|L};QE[PA]DV[TA]RHV 5.6404;4.615;4.0554;3.7019;3.6487;3.0802;3.03;2.8244;2.7382;2.6765 +;-;-;-;-;-;-;-;-;- + 2622 + 1 1.722 199712.5 1.0 4083 4541 8609 HBL1_DMSO_200M_050219_2,8626 HBL1_DMSO_200M_050219_2,8626,YYVDTAVRHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8628 46.863 26.0 1749000.0 25 0 528280.0 + 42932 VVRVQEVV 8 52 464.28460007905977 926.5546472249196 2 464.2848693728447 MULTI CID FTMS 0 0 0 8627 1977893.125 0.5861860446989529 2 -0.2126655578613281 1 Unmodified _VVRVQEVV_ REV__ENSG00000130764|ENST00000378251|LRRC47 18.13498045792455 0.6430038125133779 4 VVV 3 -1 35.445 0.0 0.0 3.8255 0.0 0.0 611.3404695607459 0.0 611.3404695607459 0.0 28.4556125503638 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 VVV 3.8255 - 12 1 1.722 39065.1 1.0 4084 4542 8627 HBL1_DMSO_200M_050219_2,8628 HBL1_DMSO_200M_050219_2,8628,VVRVQEVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8629 46.865 59.0 862810.0 25 0 81513.0 + 28686 PVQNNTAPV 9 87 470.248038865904 938.481524798608 2 470.2487060427666 MULTI CID FTMS 0 0 0 8627 337324.03125 0.0391887554349758 16 -1.5540504455566406 2 Unmodified _PVQNNTAPV_ REV__ENSG00000189079|ENST00000334344|ARID2;REV__nc|ENSG00000189079|Q68CP9-3|ARID2 14.581692164780916 0.4419739649577144 4 [{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YPP 7 -1 34.965 0.0 0.0 3.7257 0.0 0.0 0.0 109.02359618513074 109.02359618513074 21.470544657224835 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YPP 3.7257 - 182 1 1.722 44118.7 1.0 4085 4542 8627 HBL1_DMSO_200M_050219_2,8629 HBL1_DMSO_200M_050219_2,8629,PVQNNTAPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8630 46.866 48.0 1148100.0 25 0 125020.0 4355 DASSPHLQV 9 94 477.2380418967909 952.4615308603818 2 477.2382385134697 MULTI CID FTMS 0 0 0 8627 694724.75 1.0 0 0.0 3 Unmodified _DASSPHLQV_ ENSG00000242265|ENST00000612748|PEG10;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 32.30548876998284 0.1201446275138228 4 {[DA]|[EG]}SSPQH{I|L}V 9 2 + 49.865 0.0 0.0 5.2354 5.2354 75.132 0.0 0.0 0.0 19.143448373249704 3.273589343863307 3.273589343863307 3.273589343863307 0 0.6069758080123702 2.0 0.0 0.3494850021680094 {[DA]|[EG]}SSPQH{I|L}V;{[DA]|[EG]}SSPQHV{I|L};{[DA]|[EG]}SSP[AG]H{I|L}V;{[DA]|[EG]}SSA[PG]H{I|L}V;{[DA]|[EG]}SSPQ[{I|L}V]H;{[DA]|[EG]}SSP[AG]HV{I|L};{[DA]|[EG]}SSA[PG]HV{I|L};{[DA]|[EG]}[QA]{[CP]|[EA]}H{I|L}V;WSSA[YQ]{I|L}V;{[ET]|[MV]}H{[MS]|[{M(Oxidation (M))|F}A]}H{I|L}V 5.2354;4.8917;3.9017;3.7705;3.6437;3.558;3.4268;2.5773;2.3243;2.2401 -;-;-;-;-;-;-;-;-;- 367 + 1 1.722 45761.1 1.0 4086 4542 8627 HBL1_DMSO_200M_050219_2,8630 HBL1_DMSO_200M_050219_2,8630,DASSPHLQV True True DGKVSVHVI 46.865819 477.23823851347 13385179.0 8627.0 ENSG00000169710|ENST00000306749|FASN 2.842319369316101 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8631 46.868 98.0 656670.0 25 0 100040.0 + 5761 DPPDGIKV 8 69 420.7265342156436 839.4385154980872 2 420.7265807986259 MULTI CID FTMS 0 0 0 8627 557972.4375 0.320455458331733 -6 0.6232528686523438 4 Unmodified _DPPDGIKV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 24.020572477871973 0.5389365498350341 4 DPPD{[VA]|[{I|L}G]}KV 8 0 + 59.373 0.0 0.0 7.073 7.073 94.823 0.0 0.0 0.0 43.88866283220501 4.69273760456403 4.69273760456403 49.40781821834037 0 0.4247425010840047 2.0 0.0 0.0 + + DPPD{[VA]|[{I|L}G]}KV;D[{I|L}T]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]V 7.073;1.1872 +;- + 80 + 1 1.722 58069.2 1.0 4087 4542 8627 HBL1_DMSO_200M_050219_2,8631 HBL1_DMSO_200M_050219_2,8631,DPPDGIKV False True DPPDGIKV 46.867925 420.726580798626 141863292.0 8627.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 4.720341285069783 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8632 46.87 119.0 570340.0 25 0 50187.0 + + 17444 RVQEAIAEV 9 79 507.7822784166728 1013.5500039001456 2 507.7826721072197 MULTI CID FTMS 0 0 0 8627 468277.96875 0.6260459762028168 -2 0.1913108825683593 5 Unmodified _KNLNNLAEV_ ENSG00000119927|ENST00000348367|GPAM 24.020572477871973 0.2255576514309169 4 {[CP]|[EA]}RRA{I|L}AEV 9 -1 + 49.671 0.0 0.0 4.9007 4.9007 77.472 0.0 0.0 0.0 0.915149811213496 35.6914468044949 0.915149811213496 6.250612633917001 0 1.079689690656103 0.0 0.0 0.0 {[CP]|[EA]}RRA{I|L}AEV;[TP][WK]A{I|L}AEV;{[CP]|[EA]}RR[RV]EV 4.9007;4.284;2.3637 -;-;- 143 1 1.722 58181.2 1.0 4088 4542 8627 HBL1_DMSO_200M_050219_2,8632 HBL1_DMSO_200M_050219_2,8632,KNLNNLAEV False False RVQEAIAEV 46.870383 507.78267210722 6379628.5 8627.0 ENSG00000119927|ENST00000348367|GPAM 4.629268805185954 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8633 46.873 125.0 626270.0 25 0 71656.0 22501 LPVRGVEV 8 88 434.76587112779487 867.5171893223898 2 434.7660705447197 MULTI CID FTMS 0 0 0 8627 410573.4375 0.6883752868852545 2 -0.2126655578613281 6 Unmodified _LPVRGVEV_ ENSG00000113621|ENST00000358387|TXNDC15;nc|ENSG00000113621|Q96J42-2|TXNDC15 36.04419817259434 0.3004715606373109 4 {I|L}PP 3 6 50.005 0.0 0.0 5.7642 0.0 0.0 0.0 557.30551037556 557.30551037556 38.41129063296272 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PP 5.7642 - 18 + 1 1.722 65018.2 1.0 4089 4542 8627 HBL1_DMSO_200M_050219_2,8633 HBL1_DMSO_200M_050219_2,8633,LPVRGVEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8634 46.887 800.0 151450.0 25 0 12871.0 + 20933 LNEISEETTIQ 11 140 638.8179856560439 1275.6214183788877 2 638.8191406130791 MULTI CID FTMS 0 0 0 8627 153378.484375 0.2443807399290336 2 -0.2126655578613281 7 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 53.40400417844725 0.0987786977674846 4 {[QV]|[N{I|L}]|[RA]|[KV]}AD[KP]{[CA]|SS}G{M(Oxidation (M))|F}{I|L}Q 12 8 + 90.447 0.0 0.0 7.0904 7.0904 87.871 0.0 0.0 0.0 11.373106286135028 9.098233696509112 9.098233696509112 8.05462187404089 0 2.2302046884880937 1.154901959985743 0.566901560044258 1.7104093769761874 {[QV]|[N{I|L}]|[RA]|[KV]}AD[KP]{[CA]|SS}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}A{[CP]|[EA]}[KA]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}AD{M(Oxidation (M))|F}REGN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}AD{M(Oxidation (M))|F}RWN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}AD[KP]{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}{I|L}Q;{I|L}NADSS{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}AD[DG]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}A{[CP]|[EA]}[WK]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}A{[CP]|[EA]}[WQ]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}A{[CP]|[EA]}S{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q 7.0904;6.459;6.35;6.3064;6.2981;6.1988;6.1884;5.9406;5.9406;5.7965 -;-;-;-;-;-;-;-;-;- 4313 1 1.722 97707.2 0.7699999809265137 4090 4542 8627 HBL1_DMSO_200M_050219_2,8634 HBL1_DMSO_200M_050219_2,8634,LNEISEETTIQ True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8635 46.901 800.0 187220.0 25 0 14894.0 + 39505 VASPALRAV 9 178 442.2720380509595 882.529523168719 2 442.2716857790947 MULTI CID FTMS 0 0 0 8627 118907.375 0.9495317424148136 -2 0.1913108825683593 8 Unmodified _VASPALRAV_ ENSG00000025800|ENST00000373625|KPNA6 45.69961567697781 0.0497987121815769 4 VASPA{I|L}RG{I|L} 9 2 + 72.377 0.0 0.0 8.2011 8.2011 83.705 0.0 0.0 0.0 42.42378574059977 0.5462187404089178 0.5462187404089178 2.925058070310257 0 1.6520898241269029 1.6989700043360187 0.4247425010840047 0.3807196863200844 VASPA{I|L}RG{I|L};VASPS[VP]KV;VASPA[KT]P{I|L};VASPA[KT]{I|L}P;VAS[{I|L}A][KT]PP;VAS[{I|L}A]{[NV]|[RG]}P{I|L};VAS[{I|L}A]{[NV]|[RG]}{I|L}P;VA[RD][VP]KV;VA[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KV;V[DP]V{I|L}NKV 8.2011;7.8697;6.8521;6.6608;5.8695;5.7059;5.5146;4.4394;4.4394;1.9174 -;-;-;-;-;-;-;-;-;- 451 + 1 1.722 115164.0 0.5899999737739563 4091 4542 8627 HBL1_DMSO_200M_050219_2,8635 HBL1_DMSO_200M_050219_2,8635,VASPALRAV True True VASPALRAV 46.900596 442.271685779095 1144226.375 8627.0 ENSG00000025800|ENST00000373625|KPNA6 5.064280351003011 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8636 46.914 800.0 254720.0 25 0 23224.0 + -1 LFAQHKTMK 9 184 560.3027074007191 1118.590861868238 2 560.3026611208916 MULTI CID FTMS 0 0 0 8627 115578.4453125 0.3613057819510751 -3 0.3076133728027344 9 Oxidation (M) _LFAQHKTM(Oxidation (M))K_ REV__ENSG00000174236|ENST00000310791|REP15 21.53697664764585 0.2571576504437394 4 [KT]T[PS][{I|L}P]T{M(Oxidation (M))|F}K 10 -1 + 50.683 0.0 0.0 4.531 4.531 75.272 0.0 0.0 0.0 6.491414201961362 27.903376390097904 6.491414201961362 5.568109453757657 0 1.7614393726401687 0.0 0.6989700043360187 0.4194451763165202 [KT]T[PS][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[{I|L}P][PS]T{M(Oxidation (M))|F}K;[KT]T[PS][{I|L}P]TT{[CA]|SS};[KT]T[{I|L}P][PS]TT{[CA]|SS};{[TV]|[{I|L}S]}[WQ][{I|L}P]T{M(Oxidation (M))|F}K;[HT][Y{I|L}][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[{I|L}P][VG]E{M(Oxidation (M))|F}K;[{I|L}T]{[WN]|[YH]}[{I|L}P]T{M(Oxidation (M))|F}K;[Q{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[{I|L}P][VG]ET{[CA]|SS} 4.531;4.0332;3.9757;3.4779;3.3213;3.1076;3.0589;2.7109;2.5891;2.5037 -;-;-;-;-;-;-;-;-;- 1511 1 1.722 154113.1 0.7099999785423279 4092 4542 8627 HBL1_DMSO_200M_050219_2,8636 HBL1_DMSO_200M_050219_2,8636,LFAQHKTMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8637 46.928 800.0 189280.0 25 0 17846.0 + 38225 TPRVGRTL 8 169 450.2741962332561 898.5338395333123 2 450.2736083865166 MULTI CID FTMS 0 0 0 8627 119221.4140625 0.4967781111043183 -2 0.1913108825683593 10 Unmodified _TPRVGRTL_ REV__ENSG00000185436|ENST00000327535|IFNLR1;REV__nc|ENSG00000185436|Q8IU57-2|IFNLR1 19.438996006549623 0.6237395211498085 4 {I|L}T 2 -1 32.693 0.0 0.0 3.6384 0.0 0.0 0.0 681.380760732018 681.380760732018 5.028713728587661 0.0 0.0 0.0 0 0.3764613514953893 0.7958800173440752 0.0 0.0 {I|L}T 3.6384 - 139 + 1 1.722 123464.1 0.5899999737739563 4093 4542 8627 HBL1_DMSO_200M_050219_2,8637 HBL1_DMSO_200M_050219_2,8637,TPRVGRTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8638 46.942 800.0 167210.0 25 0 6839.9 + 28710 YTIDTDNSTV 10 191 564.3188719713055 1126.623191009411 2 564.3199951052666 MULTI CID FTMS 0 0 0 8627 93955.640625 1.0 0 0.0 11 Unmodified _PVSPTSLQVTV_ nc|ENSG00000149657|Q9BX40-2|LSM14B;ENSG00000149657|ENST00000279068|LSM14B 22.736283301280096 0.5583477779825423 4 GVT[YR]HTV 8 7 32.305 0.0 0.0 2.8674 0.0 0.0 195.14774042522964 0.0 195.14774042522964 0.0 16.57390133957776 0.0 0.0 0 0.3807196863200844 0.0 1.2614393726401687 0.0 GVT[YR]HTV 2.8674 - 3124 + 1 1.722 107321.8 0.6700000166893005 4094 4542 8627 HBL1_DMSO_200M_050219_2,8638 HBL1_DMSO_200M_050219_2,8638,PVSPTSLQVTV False False YTIDTDNSTV 46.942075 564.319995105267 1131933.875 8627.0 nc|ENSG00000149657|Q9BX40-2|LSM14B;;ENSG00000149657|ENST00000279068|LSM14B 4.020347913106282 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8640 46.947 14.0 3679100.0 25 0 334910.0 + 7299 EEVHTPVQLV 10 70 575.8083841765326 1149.6022154198652 2 575.8090087771416 MULTI CID FTMS 0 0 0 8639 3651410.75 0.6162579712338971 1 -0.129058837890625 1 Unmodified _EEVHTPVQLV_ REV__ENSG00000178607|ENST00000433197|ERN1;REV__ENST00000584041.1_1_17:62152499-62207458:-|nuORF 19.256988751693697 0.5244284437930726 4 V{M(Oxidation (M))|F}E{I|L}KE{[WT]|[RM]}V 9 -1 + 53.114 0.0 0.0 4.6202 4.6202 72.524 0.0 0.0 0.0 34.13479704297593 5.915602107077049 5.915602107077049 3.2390874094431865 0 0.4247425010840047 0.0 0.805462187404089 0.0 V{M(Oxidation (M))|F}E{I|L}KE{[WT]|[RM]}V;{[ET]|[MV]}R{M(Oxidation (M))|F}K{I|L}EEV;V{M(Oxidation (M))|F}{I|L}EKE{[WT]|[RM]}V;{[ET]|[MV]}R{M(Oxidation (M))|F}KE{I|L}EV;{[QN]|[E{I|L}]|[KN]}[YQ]K{I|L}EEV;{[ET]|[MV]}R{M(Oxidation (M))|F}K{I|L}TQQ;HHT{I|L}KE{[WT]|[RM]}V;{[QN]|[E{I|L}]|[KN]}[YQ]KE{I|L}EV;{[QN]|[E{I|L}]|[KN]}[YQ]K{I|L}TQQ 4.6202;4.3385;4.2469;3.9651;2.9693;2.6653;2.6197;2.5959;1.2961 -;-;-;-;-;-;-;-;- 138 + 1 1.726 43503.9 1.0 4095 4543 8639 HBL1_DMSO_200M_050219_2,8640 HBL1_DMSO_200M_050219_2,8640,EEVHTPVQLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8641 46.948 40.0 1107500.0 25 0 115630.0 + 24999 MPPPPPQGV 9 76 460.23852327962805 918.462493626056 2 460.2384216189384 MULTI CID FTMS 0 0 0 8639 882422.0 0.0476160052700063 85 -6.91351318359375 2 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 49.66892048692302 0.0410958345688192 4 {NN|[MP]|[D{I|L}]|[EV]}PPP 5 4 25.833 0.0 0.0 2.8126 0.0 0.0 0.0 396.1874379536527 396.1874379536527 9.177105005197651 0.0 0.0 0.0 0 0.6382104921644451 0.0 0.3252574989159953 0.0 + {NN|[MP]|[D{I|L}]|[EV]}PPP 2.8126 + + 88 1 1.726 42148.4 1.0 4096 4543 8639 HBL1_DMSO_200M_050219_2,8641 HBL1_DMSO_200M_050219_2,8641,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8642 46.957 518.0 466560.0 25 0 106840.0 -1 0 65 1158.140302501088 3471.399078103464 3 1158.476245105267 MULTI CID FTMS 0 0 0 8639 746101.625 0.5331901383979497 3 -0.2998619079589844 3 4 C(Carbamidomethyl (C)){M(Oxidation (M))|F}G 3 -1 13.188 0.0 0.0 0.37989 0.0 0.0 948.3478819475162 2155.9254260861176 3104.273308033634 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){M(Oxidation (M))|F}G 0.37989 - 92 + 1 1.726 191535.3 1.0 4097 4543 8639 HBL1_DMSO_200M_050219_2,8642 HBL1_DMSO_200M_050219_2,8642, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8643 46.959 77.0 961380.0 25 0 275590.0 + 22659 LPYRRPPSI 9 57 549.8243048747577 1097.6340568163153 2 549.8248779177666 MULTI CID FTMS 0 0 0 8639 701487.8125 1.0 0 0.0 4 Unmodified _LPYRRPPSI_ ENSG00000138443|ENST00000261018|ABI2;ENST00000441061.5_2_2:204231693-204292072:+|nuORF;nc|ENSG00000138443|Q9NYB9-2|ABI2;nc|ENSG00000138443|Q9NYB9-3|ABI2;nc|ENSG00000138443|Q9NYB9-4|ABI2;nc|ENSG00000138443|Q9NYB9|ABI2 10.823927491677226 0.5436922275383211 4 A 1 9 10.485 0.0 0.0 0.9552 0.0 0.0 614.3639895329153 409.2100008600219 1023.5739903929372 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 A 0.9552 - 3 + 1 1.726 62812.2 1.0 4098 4543 8639 HBL1_DMSO_200M_050219_2,8643 HBL1_DMSO_200M_050219_2,8643,LPYRRPPSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8644 46.961 106.0 732210.0 25 0 52182.0 + 41521 VPNNKITVV 9 113 492.2974984222936 982.5804439113872 2 492.2982360720634 MULTI CID FTMS 0 0 0 8639 511029.34375 0.0102939473081282 15 -1.4704437255859375 5 Unmodified _VPNNKITVV_ ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 30.63653989081413 0.1413794767160703 4 VT{I|L}{I|L} 4 7 23.9 0.0 0.0 2.4324 0.0 0.0 0.0 553.2772310846311 553.2772310846311 0.4300592554696365 0.0 0.0 0.0 0 0.1549471895720985 1.154901959985743 0.0 0.0 VT{I|L}{I|L} 2.4324 - 207 + 1 1.726 63360.6 1.0 4099 4543 8639 HBL1_DMSO_200M_050219_2,8644 HBL1_DMSO_200M_050219_2,8644,VPNNKITVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8645 46.965 214.0 394250.0 25 0 29586.0 + 3349 AYNYAEQTM 9 114 545.7289610472043 1089.4433691612085 2 545.7294189333916 MULTI CID FTMS 0 0 0 8639 418092.71875 0.7859137751950926 -1 0.0836067199707031 6 Unmodified _AYNYAEQTM_ ENSG00000173914|ENST00000310046|RBM4B 67.34385681178166 0.0221257235307089 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NY 4 5 33.333 0.0 0.0 3.0596 0.0 0.0 0.0 575.2152557181022 575.2152557181022 6.974199977052848 0.0 0.0 0.0 0 0.0 2.0 0.0 0.5796896906561032 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NY 3.0596 + + 724 1 1.726 70136.9 1.0 4100 4543 8639 HBL1_DMSO_200M_050219_2,8645 HBL1_DMSO_200M_050219_2,8645,AYNYAEQTM True True AYNYAEQTM 46.965125 545.729418933392 4103625.75 8639.0 ENSG00000173914|ENST00000310046|RBM4B 7.1220277150472 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8646 46.972 372.0 264030.0 25 0 17637.0 -1 EGEIVQMHP 9 136 528.2425945176178 1054.4706361020355 2 528.2434570193291 MULTI CID FTMS 0 0 0 8639 260752.515625 0.2783569764345604 3 -0.2998619079589844 7 Oxidation (M) _EGEIVQM(Oxidation (M))HP_ ENSG00000183579|ENST00000544604|ZNRF3 24.020572477871973 0.2255576514309169 4 {[DA]|[EG]}E[W{I|L}]Q{M(Oxidation (M))|F}{M(Oxidation (M))|F} 8 -1 + 42.401 0.0 0.0 4.0211 4.0211 65.396 0.0 0.0 0.0 14.953584662885715 8.119857433598497 8.119857433598497 0.7648373010427179 0 0.3807196863200844 1.0969100130080565 0.0 0.0 {[DA]|[EG]}E[W{I|L}]Q{M(Oxidation (M))|F}{M(Oxidation (M))|F};WE[TP]TQ{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[DA]|[EG]}E[{I|L}V]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T{M(Oxidation (M))|F};{[DA]|[EG]}E[W{I|L}][AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F};WE[TP]T[AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[DA]|[EG]}E[TP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{M(Oxidation (M))|F};WE[{I|L}V]M[KC]{M(Oxidation (M))|F};WE[YV][NP]T{M(Oxidation (M))|F};[NP]TQ[W{I|L}][C(Carbamidomethyl (C))H];{[DA]|[EG]}E{[ET]|[MV]}{[QD]|[EN]|[WG]|[KD]|[RS]}T{M(Oxidation (M))|F} 4.0211;3.9485;3.3917;3.1427;3.0702;2.845;2.8355;2.6371;2.4477;2.3824 -;-;-;-;-;-;-;-;-;- 1211 + 1 1.726 81907.9 1.0 4101 4543 8639 HBL1_DMSO_200M_050219_2,8646 HBL1_DMSO_200M_050219_2,8646,EGEIVQMHP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8647 46.98 438.0 275000.0 25 0 18840.0 43139 VYPFQGDSTV 10 139 556.7644004819243 1111.5142480306486 2 556.7654296755791 MULTI CID FTMS 0 0 0 8639 193286.46875 0.4994865158836865 2 -0.2008285522460937 8 Unmodified _VYPFQGDSTV_ ENSG00000197353|ENST00000359228|LYPD2 30.63653989081413 0.2803493085145199 4 [YV]PS 4 6 46.555 0.0 0.0 4.1884 0.0 0.0 0.0 662.2763625275404 662.2763625275404 34.56485629844558 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.6109243748081782 0.0 [YV]PS 4.1884 - 719 + 1 1.726 98547.7 1.0 4102 4543 8639 HBL1_DMSO_200M_050219_2,8647 HBL1_DMSO_200M_050219_2,8647,VYPFQGDSTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8648 46.993 800.0 188900.0 25 0 28538.0 -1 CCLHSDYCSQN 11 133 693.7474415058103 1385.4803300784206 2 693.7490722537041 MULTI CID FTMS 0 0 0 8639 178055.234375 0.2823375680080742 -3 0.2749176025390625 9 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))LHSDYCSQN_ ENSG00000086570|ENST00000261800|FAT2 7.101721422024254 0.8416415510090076 4 VV{M(Oxidation (M))|F}DASS 7 -1 56.38 0.0 0.0 4.0693 0.0 0.0 285.0834317403331 392.0743807428344 677.1578124831675 0.0 0.0 0.0 0.0 0 0.0 0.0 2.129854553292708 0.0 VV{M(Oxidation (M))|F}DASS 4.0693 - 965 + 1 1.726 111575.5 0.7699999809265137 4103 4543 8639 HBL1_DMSO_200M_050219_2,8648 HBL1_DMSO_200M_050219_2,8648,CCLHSDYCSQN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8649 47.0 373.0 195590.0 25 0 8880.2 + 45465 YTIDTDNSTV 10 124 564.7566528187323 1127.4987527042645 2 564.7570068240166 MULTI CID FTMS 0 0 0 8639 166901.9375 1.0 0 0.0 10 Unmodified _YTIDTDNSTV_ ENSG00000149657|ENST00000279068|LSM14B;nc|ENSG00000149657|Q9BX40-2|LSM14B 32.30548876998284 0.2428506522065767 4 {[TV]|[{I|L}S]}EY[{I|L}P]D[YE] 9 9 + 28.082 0.0 0.0 2.4907 2.4907 61.929 0.0 0.0 0.0 0.8118579507535806 0.2802872360024366 0.2802872360024366 0.8118579507535806 0 0.0 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}EY[{I|L}P]D[YE];[YT]{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]D[YE];{NN|[MP]|[D{I|L}]|[EV]}TY[{I|L}P]D[YE];[YT]{[WN]|[YH]}[RP][YE];[Y{M(Oxidation (M))|F}]D[{I|L}P]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}V;[Y{M(Oxidation (M))|F}]D[{I|L}P]Y[DP]V;[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}V][{I|L}P]D[YE];[Y{M(Oxidation (M))|F}]DQQ{NN|[MP]|[D{I|L}]|[EV]}TV;{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V]QQD[YE];[Y{M(Oxidation (M))|F}][RP]{[WN]|[YH]}{M(Oxidation (M))|F}V 2.4907;2.4187;1.6897;1.5986;1.5178;1.5178;1.0601;0.82872;0.78226;0.69772 -;-;-;-;-;-;-;-;-;- 648 1 1.726 64810.2 1.0 4104 4543 8639 HBL1_DMSO_200M_050219_2,8649 HBL1_DMSO_200M_050219_2,8649,YTIDTDNSTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8650 47.014 800.0 427210.0 25 0 18022.0 + 38673 TTLEGHLAKV 10 240 534.8064427084627 1067.5983324837252 2 534.8059570193291 MULTI CID FTMS 0 0 0 8639 166214.9375 0.4855612286304568 -1 0.0836067199707031 11 Unmodified _TTLEGHLAKV_ ENSG00000237649|ENST00000428849|KIFC1 80.6760300276096 0.0165137828474802 4 TT{I|L}EGH{I|L}AVK 10 2 + 93.615 0.0 0.0 8.7687 8.7687 79.476 0.0 0.0 0.0 33.52182518111362 0.1402443305480289 0.1402443305480289 0.1402443305480289 0 1.8182937561523311 1.6989700043360187 0.6139829889124311 0.4269359821608809 TT{I|L}EGH{I|L}AVK;TT{I|L}EGH{I|L}AKV;TTE{I|L}GH{I|L}AVK;TTE{I|L}GH{I|L}AKV;TT{I|L}DAH{I|L}AVK;TT{I|L}DAH{I|L}AKV;TTEVAH{I|L}AVK;TTEVAH{I|L}AKV;TT{I|L}WH{I|L}AVK;TT{I|L}WH{I|L}AKV 8.7687;8.7556;8.7341;8.7209;8.3218;8.3087;8.2872;8.274;7.5818;7.5686 -;+;-;-;-;-;-;-;-;- + 12824 + 1 1.726 257423.5 0.7599999904632568 4105 4543 8639 HBL1_DMSO_200M_050219_2,8650 HBL1_DMSO_200M_050219_2,8650,TTLEGHLAKV True True TTLEGHLAKV 47.014004 534.805957019329 2105203.0 8639.0 ENSG00000237649|ENST00000428849|KIFC1 7.061251640319824 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8651 47.017 142.0 414380.0 25 0 27221.0 38141 TPMPSTPRV 9 108 493.2594526176222 984.5043523020444 2 493.7617370486259 MULTI CID FTMS 0 0 0 8639 152586.890625 0.9695445477396564 1 -0.129058837890625 12 Unmodified _TPMPSTPRV_ ENSG00000135451|ENST00000257909|TROAP;ENST00000546735.5_1_12:49717501-49723306:+|nuORF;ENST00000551192.5_1_12:49719304-49723306:+|nuORF 10.073929032068715 0.563993802247229 4 {[QN]|[E{I|L}]|[KN]}SVW[RP]V 8 6 + 15.583 0.0 0.0 1.5829 1.5829 68.474 0.0 0.0 0.0 3.1091126836115297 0.8906251874479683 0.8906251874479683 5.002450535668002 0 0.0 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}SVW[RP]V;{[VA]|[{I|L}G]}{[TV]|[{I|L}S]}WVS[HS];{[QN]|[E{I|L}]|[KN]}SVW[RV]P;[KG][KG]WVS[HS];{[QN]|[E{I|L}]|[KN]}SV{[DA]|[EG]}[RP]V;[VS][{I|L}A]WVS[HS];{[QN]|[E{I|L}]|[KN]}SVW[{I|L}A]AP;{[QN]|[E{I|L}]|[KN]}SP{[VA]|[{I|L}G]}[RD]V;{[QN]|[E{I|L}]|[KN]}SV[PA][RD]V;{[VA]|[{I|L}G]}{[TV]|[{I|L}S]}{[DA]|[EG]}VS[HS] 1.5829;1.0747;0.89552;0.8494;0.64207;0.59011;0.58427;0.51517;0.3363;0.13943 -;-;-;-;-;-;-;-;-;- 268 + 1 1.726 51552.1 1.0 4106 4543 8639 HBL1_DMSO_200M_050219_2,8651 HBL1_DMSO_200M_050219_2,8651,TPMPSTPRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8652 47.025 377.0 224220.0 25 0 14065.0 6774 EEADWIYRNAF 11 109 707.3228160807513 1412.6310792283025 2 707.3233520388603 MULTI CID FTMS 0 0 0 8639 148430.640625 0.3918996377029825 -2 0.1631431579589843 13 Unmodified _EEADWIYRNAF_ ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 24.99096001346401 0.505407273373304 4 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}G[CS]VQQNA{M(Oxidation (M))|F} 13 8 + 86.787 0.0 0.0 6.1436 6.1436 72.587 0.0 0.0 0.0 1.365589917559845 3.634993639681312 1.365589917559845 0.0719416395323264 0 1.192323921596858 0.0 0.4604093769761876 2.484636880228201 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}G[CS]VQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}N[MT]QQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}[CS]VQQNA{M(Oxidation (M))|F};[HQ]DE[TP]VQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}G{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}GG[MT]QQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}G[MT]QQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG[HV]EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}G[CS]V[AG]QNA{M(Oxidation (M))|F} 6.1436;6.1385;6.1124;6.047;6.0399;6.0087;5.9694;5.9382;5.8453;5.5014 -;-;-;-;-;-;-;-;-;- 11141 1 1.726 63652.3 1.0 4107 4543 8639 HBL1_DMSO_200M_050219_2,8652 HBL1_DMSO_200M_050219_2,8652,EEADWIYRNAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8653 47.028 168.0 327400.0 25 0 22460.0 -1 YACELSKTM 9 103 551.7484583021203 1101.4823636710405 2 551.7498657107353 MULTI CID FTMS 0 0 0 8639 129998.984375 0.0226290169756378 4 -0.4236221313476562 14 Carbamidomethyl (C) _YAC(Carbamidomethyl (C))ELSKTM_ ENSG00000164169|ENST00000322396|PRMT9;nc|ENSG00000164169|Q6P2P2-2|PRMT9 13.50788311687929 0.4710407108020397 4 [PG]GNYE 6 -1 24.769 0.0 0.0 2.2487 0.0 0.0 0.0 481.2147604818405 481.2147604818405 0.7197513037565741 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.3054621874040891 [PG]GNYE 2.2487 - 214 1 1.726 51266.7 1.0 4108 4543 8639 HBL1_DMSO_200M_050219_2,8653 HBL1_DMSO_200M_050219_2,8653,YACELSKTM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8654 47.042 800.0 156180.0 25 0 15195.0 + 45919 YYVDTAVRHV 10 102 611.8144334742698 1221.6143140153397 2 611.8141357302666 MULTI CID FTMS 0 0 0 8639 118297.5390625 1.0 0 0.0 15 Unmodified _YYVDTAVRHV_ ENSG00000149273|ENST00000531188|RPS3;nc|ENSG00000149273|P23396-2|RPS3 67.83816525789305 0.0190062514522628 4 YYVDTAVRHV 10 0 + 100.04 0.0 0.0 8.1891 8.1891 96.126 0.0 0.0 0.0 79.49244287308998 6.822581265925436 6.822581265925436 22.88725489996436 0 1.5387254899964358 2.0 0.7614393726401688 0.3494850021680094 + + YYVDTAVRHV;YYV[PS]CVRHV;YYVDKKYM{I|L};YYVDKKY{M(Oxidation (M))|F}P;YYVDKK[NG]HV;YY[WE]AVRHV;YYVKKDYM{I|L};YYVKKDY{M(Oxidation (M))|F}P;YYVKKD[NG]HV;YYV[KT]AAYM{I|L} 8.1891;6.3155;5.6383;5.5317;5.4106;5.2655;5.1195;5.0128;4.8918;3.9564 +;-;-;-;-;-;-;-;-;- + 442 + 1 1.726 95379.1 0.6700000166893005 4109 4543 8639 HBL1_DMSO_200M_050219_2,8654 HBL1_DMSO_200M_050219_2,8654,YYVDTAVRHV True True YYVDTAVRHV 47.042224 611.814135730267 3662497.375 8639.0 nc|ENSG00000149273|P23396-2|RPS3;;ENSG00000149273|ENST00000531188|RPS3 8.09008264541626 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8655 47.056 800.0 58785.0 25 0 14131.0 -1 0 37 1121.131510485241 3360.372702055924 3 1121.461718738079 MULTI CID FTMS 0 0 0 8639 96970.3828125 0.0790943885782998 4 -0.4236221313476562 16 4 E 1 -1 6.9897 0.0 0.0 0.208 0.0 0.0 2704.144548680636 524.1615084283811 3228.306057109017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.208 - 8 + 1 1.726 47230.3 0.4099999964237213 4110 4543 8639 HBL1_DMSO_200M_050219_2,8655 HBL1_DMSO_200M_050219_2,8655, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8656 47.071 800.0 351820.0 25 0 19473.0 -1 0 239 543.3009218374228 542.2936453708228 1 543.3008300662041 MULTI CID FTMS 0 0 0 8639 98198.5625 0.0202416839884699 10 -0.9570045471191406 17 4 {[QV]|[N{I|L}]|[RA]|[KV]}V 3 -1 25.488 0.0 0.0 4.7001 0.0 0.0 0.0 213.07499237693528 213.07499237693528 5.673104269835903 0.0 0.0 0.0 0 0.1271595765414318 2.0 0.0 0.0994850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}V 4.7001 - 181 1 1.726 210320.4 0.6100000143051147 4111 4543 8639 HBL1_DMSO_200M_050219_2,8656 HBL1_DMSO_200M_050219_2,8656, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8658 47.076 8.9 7653600.0 25 0 1490200.0 + 34893 SQIDPSSIERA 11 54 601.8039149111047 1201.5932768890093 2 601.8046142458916 MULTI CID FTMS 0 0 0 8657 6857874.5 1.0 0 0.0 1 Unmodified _SQIDPSSIERA_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 46.4752305370441 0.1371501875038488 4 {[QS]|[NT]}{I|L}DPS{I|L}SE{[QV]|[N{I|L}]|[RA]|[KV]} 11 2 + 61.387 0.0 0.0 5.1088 5.1088 83.056 0.0 0.0 0.0 58.45493868698721 2.239704346135732 2.239704346135732 9.758276371937278 0 1.742992819099939 1.2218487496163564 0.4247425010840047 0.0 {[QS]|[NT]}{I|L}DPS{I|L}SE{[QV]|[N{I|L}]|[RA]|[KV]};{[QS]|[NT]}{I|L}DP{[WT]|[RM]}E{[QV]|[N{I|L}]|[RA]|[KV]};{[QS]|[NT]}{I|L}[HS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{[QV]|[N{I|L}]|[RA]|[KV]} 5.1088;4.2967;1.8827 -;-;- 61 + 1 1.726 56007.3 1.0 4112 4544 8657 HBL1_DMSO_200M_050219_2,8658 HBL1_DMSO_200M_050219_2,8658,SQIDPSSIERA False True SQIDPSSIERA 47.075749 601.804614245892 199472076.0 8657.0 EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;;ENSG00000100393|ENST00000263253|EP300 6.904930750528972 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8659 47.077 36.0 1423400.0 25 0 139270.0 + 3374 AYQEAVRTL 9 73 525.7819821158197 1049.5494112984393 2 525.7828857302666 MULTI CID FTMS 0 0 0 8657 1278212.625 0.3081112894602489 2 -0.1708030700683593 2 Unmodified _AYQEAVRTL_ ENSG00000127666|ENST00000248244|TICAM1 45.69961567697781 0.0497987121815769 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEAVRT{I|L} 9 0 + 74.592 0.0 0.0 7.1071 7.1071 89.749 0.0 0.0 0.0 62.37388445241912 9.45477404615822 9.45477404615822 9.208187539523747 0 0.4247425010840047 2.0 0.9247425010840048 0.3807196863200844 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEAVRT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]EAVRT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q{I|L}{[DA]|[EG]}RT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]{I|L}{[DA]|[EG]}RT{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VV[{I|L}T]Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VV[WR]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 7.1071;6.2297;5.1528;4.2754;0.41516;0.084741 +;-;-;-;-;- + 91 + 1 1.726 48861.5 1.0 4113 4544 8657 HBL1_DMSO_200M_050219_2,8659 HBL1_DMSO_200M_050219_2,8659,AYQEAVRTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8660 47.078 29.0 2740600.0 25 0 484460.0 21738 LPLWTPKIM 9 72 366.8857699151943 1097.635480345783 3 366.8856078982353 MULTI CID FTMS 0 0 0 8657 1791687.75 0.7843300792773275 1 -0.0717697143554687 3 Unmodified _LPLWTPKIM_ ENSG00000183246|ENST00000433039|RIMBP3C;ENSG00000274600|ENST00000620804|RIMBP3B;ENSG00000275793|ENST00000619918|RIMBP3 14.838274106304384 0.4350285940865338 4 {I|L}{I|L} 2 7 20.969 0.0 0.0 1.9104 0.0 0.0 0.0 868.444124892827 868.444124892827 6.989700043360188 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 1.9104 - 43 + 1 1.726 72252.5 1.0 4114 4544 8657 HBL1_DMSO_200M_050219_2,8660 HBL1_DMSO_200M_050219_2,8660,LPLWTPKIM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8661 47.08 103.0 902880.0 25 0 175440.0 -1 0 71 966.4323678807548 1930.8501828283097 2 966.9356567263604 MULTI CID FTMS 0 0 0 8657 998724.5625 0.7664358635122344 4 -0.3892860412597656 4 4 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L} 6 -1 24.86 0.0 0.0 1.2875 0.0 0.0 0.0 1301.4880890814263 1301.4880890814263 3.6304496843001104 0.0 0.0 0.0 0 0.0 0.6777807052660807 0.3252574989159953 0.6747425010840047 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L} 1.2875 - 238 1 1.726 70629.7 1.0 4115 4544 8657 HBL1_DMSO_200M_050219_2,8661 HBL1_DMSO_200M_050219_2,8661, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8662 47.083 99.0 336260.0 25 0 34956.0 -1 LQFCENCCQ 9 70 629.7346177843814 1257.454682635563 2 629.7354614138603 MULTI CID FTMS 0 0 0 8657 760067.3125 0.3969921433202749 -2 0.2126655578613281 5 3 Carbamidomethyl (C) _LQFC(Carbamidomethyl (C))ENC(Carbamidomethyl (C))C(Carbamidomethyl (C))Q_ ENSG00000198945|ENST00000361794|L3MBTL3;nc|ENSG00000198945|Q96JM7-2|L3MBTL3 4.75600775471527 0.7486543447549536 4 [Q{I|L}]W 3 -1 24.722 0.0 0.0 1.9661 0.0 0.0 0.0 827.2104559112064 827.2104559112064 5.848396689760094 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.3807196863200844 [Q{I|L}]W 1.9661 - 101 1 1.726 35148.4 1.0 4116 4544 8657 HBL1_DMSO_200M_050219_2,8662 HBL1_DMSO_200M_050219_2,8662,LQFCENCCQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8663 47.084 70.0 941320.0 25 0 109460.0 + 26820 PAPPPPQPL 9 96 457.2606688128342 912.5067846924684 2 457.2609435915947 MULTI CID FTMS 0 0 0 8657 737448.6875 0.8611665049190991 -2 0.2126655578613281 6 Unmodified _PAPPPPQPL_ ENST00000317173.8_1_8:9911977-10102635:+|nuORF;ENST00000441698.6_1_8:9911977-10065409:+|nuORF 81.86404211737425 0.017065112157077 4 [PA]PPPP[QP]{I|L} 9 0 + 70.952 0.0 0.0 7.7755 7.7755 95.852 0.0 0.0 0.0 56.97289377609621 0.999161495794425 0.999161495794425 29.252509456924827 0 2.3494850021680094 2.0 0.0 0.7614393726401688 + + [PA]PPPP[QP]{I|L};[PA][YK]P[QP]{I|L};[PA]P[YK][QP]{I|L} 7.7755;4.5698;4.4873 +;-;- + 507 + 1 1.726 57275.7 1.0 4117 4544 8657 HBL1_DMSO_200M_050219_2,8663 HBL1_DMSO_200M_050219_2,8663,PAPPPPQPL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8664 47.086 56.0 1099200.0 25 0 183600.0 + 6374 DVYESSVKV 9 86 513.2609178654473 1024.5072827976944 2 513.2616454958916 MULTI CID FTMS 0 0 0 8657 715643.9375 0.3051234819375942 -2 0.2126655578613281 7 Unmodified _DVYESSVKV_ ENSG00000042429|ENST00000251871|MED17 34.93206674587334 0.1032771302489716 4 [DV]YESSVKV 9 0 + 63.223 0.0 0.0 6.1711 6.1711 91.763 0.0 0.0 0.0 44.8070754011581 10.041151399268031 10.041151399268031 63.2234504802056 0 1.0941876774005248 2.0 0.4247425010840047 0.0 + + [DV]YESSVKV 6.1711 + + 110 + 1 1.726 53583.0 1.0 4118 4544 8657 HBL1_DMSO_200M_050219_2,8664 HBL1_DMSO_200M_050219_2,8664,DVYESSVKV True True DVYESSVKV 47.085593 513.261645495892 45978156.0 8657.0 ENSG00000042429|ENST00000251871|MED17 6.765469551086426 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8665 47.088 136.0 571850.0 25 0 26392.0 + 45774 YYIVKYVDW 9 95 624.8165305604973 1247.6185081877943 2 625.3194457888603 MULTI CID FTMS 0 0 0 8657 657827.0 0.7521303757288983 2 -0.1708030700683593 8 Unmodified _YYIVKYVDW_ REV__ENSG00000179639|ENST00000693622|FCER1A 19.62595529434964 0.305431704817896 4 YY{I|L}V{M(Oxidation (M))|F}RTGE 9 -1 72.366 0.0 0.0 5.8003 0.0 0.0 0.0 116.0510271661742 116.0510271661742 36.02334274300941 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 1.2134679910804405 0.0 YY{I|L}V{M(Oxidation (M))|F}RTGE 5.8003 - 1326 + 1 1.726 62544.1 1.0 4119 4544 8657 HBL1_DMSO_200M_050219_2,8665 HBL1_DMSO_200M_050219_2,8665,YYIVKYVDW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8666 47.092 201.0 666410.0 25 0 60370.0 -1 LCEQARSCRFY 11 103 745.3384553507148 1488.6623577682294 2 745.3399536013603 MULTI CID FTMS 0 0 0 8657 517437.875 0.4799720933446778 -2 0.2126655578613281 9 2 Carbamidomethyl (C) _LC(Carbamidomethyl (C))EQARSC(Carbamidomethyl (C))RFY_ ENSG00000132300|ENST00000254630|PTCD3;ENST00000465560.5_1_2:86333370-86346707:+|nuORF;ENST00000473829.1_1_2:86333370-86335660:+|nuORF;ENST00000488801.5_1_2:86333370-86339044:+|nuORF 8.155526934196011 0.8366696279279818 4 {[QG]|[NA]}GAQ[R{M(Oxidation (M))|F}]CQNA{M(Oxidation (M))|F}Y 13 -1 + 69.721 0.0 0.0 4.6834 4.6834 74.858 0.0 0.0 0.0 4.934183735306107 40.74965266766869 4.934183735306107 4.732371441936266 0 0.8935078169319297 0.8239087409443188 0.0 2.162437995416459 {[QG]|[NA]}GAQ[R{M(Oxidation (M))|F}]CQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQ[R{M(Oxidation (M))|F}]CQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQ[R{M(Oxidation (M))|F}]CQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQ[R{M(Oxidation (M))|F}]C[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[AG][R{M(Oxidation (M))|F}]CQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QQ[R{M(Oxidation (M))|F}]CQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}AGQ[R{M(Oxidation (M))|F}]CQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[{I|L}A]PMCQNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}N[C(Carbamidomethyl (C))R]AQQNA{M(Oxidation (M))|F}Y 4.6834;4.3655;4.2639;4.074;4.074;4.074;4.0531;4.0472;3.8396;3.8121 -;-;-;-;-;-;-;-;-;- 1310 1 1.726 97219.2 1.0 4120 4544 8657 HBL1_DMSO_200M_050219_2,8666 HBL1_DMSO_200M_050219_2,8666,LCEQARSCRFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8667 47.094 94.0 557340.0 25 0 41566.0 + 24194 MAEGAPRIV 9 78 472.25502495682525 942.4954969804504 2 472.2551147341728 MULTI CID FTMS 0 0 0 8657 428966.40625 1.0 0 0.0 10 Unmodified _MAEGAPRIV_ ENST00000392708.8_1_11:125462770-125462797:+|nuORF 36.12702656103203 0.0967173616627612 4 MAEGA 5 4 69.949 0.0 0.0 7.4216 0.0 0.0 0.0 480.2941554372282 480.2941554372282 58.83925646871916 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + MAEGA 7.4216 + + 84 + 1 1.726 45558.3 1.0 4121 4544 8657 HBL1_DMSO_200M_050219_2,8667 HBL1_DMSO_200M_050219_2,8667,MAEGAPRIV True True MAEGAPRIV 47.09427 472.255114734173 2937658.75 8657.0 ENST00000392708.8_1_11:125462770-125462797:+|nuORF 6.294517199198405 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8668 47.097 109.0 368920.0 25 0 27247.0 + 3362 AYPNNYETM 9 85 551.7286991502806 1101.442845367361 2 551.7291747927666 MULTI CID FTMS 0 0 0 8657 329652.53125 0.7375082733785034 -2 0.2126655578613281 11 Unmodified _AYPNNYETM_ ENSG00000198730|ENST00000361367|CTR9 13.50788311687929 0.4710407108020397 4 E[HT]TM 5 7 24.693 0.0 0.0 2.2419 0.0 0.0 484.1959714433361 0.0 484.1959714433361 0.0 13.979400086720377 0.0 0.0 0 0.0 0.0 0.5484550065040282 0.0 E[HT]TM 2.2419 - 91 + 1 1.726 42032.4 1.0 4122 4544 8657 HBL1_DMSO_200M_050219_2,8668 HBL1_DMSO_200M_050219_2,8668,AYPNNYETM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8669 47.1 147.0 475660.0 25 0 53908.0 10016 FPLPWTPL 8 98 485.7717627007297 0 485.7716552615166 PEAK CID FTMS 0 0 0 8657 328764.78125 0.680655778475397 -9 0.9142570495605468 12 Unmodified _FPLPWTPL_ ENST00000461547.5_1_20:56191111-56191654:-|nuORF 26.34127834903884 0.298120260672589 4 PP 2 6 15.217 0.0 0.0 1.5695 0.0 0.0 147.06884252246078 625.3323155898454 772.4011581123061 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PP 1.5695 - 113 + 1 1.726 57451.9 1.0 4123 4544 8657 HBL1_DMSO_200M_050219_2,8669 HBL1_DMSO_200M_050219_2,8669,FPLPWTPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8670 47.103 184.0 333530.0 25 0 85020.0 + 45805 YYLVKREDY 9 67 416.8799924949912 1247.6181480851735 3 416.8800536990166 MULTI CID FTMS 0 0 0 8657 314048.65625 0.1948509954319484 2 -0.1708030700683593 13 Unmodified _YYLVKREDY_ ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 14.95716135407024 0.4318104563536712 4 YY{I|L}VK 5 4 56.938 0.0 0.0 4.5638 0.0 0.0 0.0 578.2227877252561 578.2227877252561 43.44335023848103 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.3494850021680094 + YY{I|L}VK 4.5638 + + 69 + 1 1.726 56896.2 1.0 4124 4544 8657 HBL1_DMSO_200M_050219_2,8670 HBL1_DMSO_200M_050219_2,8670,YYLVKREDY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8671 47.107 192.0 539720.0 25 0 47860.0 + 21067 LPAGALHQV 9 117 453.2634380963817 904.5123232595636 2 453.2644225955009 MULTI CID FTMS 0 0 0 8657 266932.8125 0.592730917920523 -1 0.129058837890625 14 Unmodified _LPAGALHQV_ ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C 57.47134341890925 0.0274820932774257 4 {I|L}PAQ{I|L}HN{I|L} 8 4 + 67.362 0.0 0.0 7.4473 7.4473 79.664 0.0 0.0 0.0 25.63023863175603 1.497623203333319 1.497623203333319 1.497623203333319 0 0.6549471895720985 1.6989700043360187 0.0 0.7302046884880937 {I|L}PAQ{I|L}HN{I|L};{I|L}PAQ{I|L}HQV;{I|L}PA[AG]{I|L}HN{I|L};{I|L}PA[AG]{I|L}HQV;{I|L}PAQ{I|L}HGG{I|L};{I|L}PAQ{I|L}H[AG]V;{I|L}PA[AG]{I|L}HGG{I|L};{I|L}PA[AG]{I|L}H[AG]V;{I|L}V[VS]GK[R{M(Oxidation (M))|F}];{I|L}[{I|L}T]AGK[R{M(Oxidation (M))|F}] 7.4473;7.2817;6.4233;6.2577;6.0856;5.92;4.598;4.4324;2.1106;1.5578 -;-;-;+;-;-;-;-;-;- + 1151 + 1 1.726 89894.7 1.0 4125 4544 8657 HBL1_DMSO_200M_050219_2,8671 HBL1_DMSO_200M_050219_2,8671,LPAGALHQV True True LPAGALHQV 47.10673 453.264422595501 3059500.25 8657.0 nc|ENSG00000171988|Q15652-3|JMJD1C;;ENSG00000171988|ENST00000399262|JMJD1C 5.363160292307536 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8672 47.11 172.0 665890.0 25 0 52826.0 + 39303 VADPHNLKI 9 132 336.1936774602645 1005.5592029809936 3 336.1937744021416 MULTI CID FTMS 0 0 0 8657 265986.59375 1.0 0 0.0 15 Unmodified _VADPHNLKI_ ENSG00000115042|ENST00000233379|FAHD2A;ENSG00000144199|ENST00000414820|FAHD2B;ENST00000463096.5_1_2:97749678-97751586:-|nuORF;ENST00000470100.1_1_2:96076623-96078518:+|nuORF;ENST00000607780.5_1_2:96676383-96687353:+|nuORF 11.494710602746466 0.5255349189887087 4 {I|L} 1 8 13.979 0.0 0.0 1.3902 0.0 0.0 874.4643371136093 0.0 874.4643371136093 0.0 -3.614328194166564 -3.614328194166564 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3902 + + 98 + 1 1.726 91805.8 1.0 4126 4544 8657 HBL1_DMSO_200M_050219_2,8672 HBL1_DMSO_200M_050219_2,8672,VADPHNLKI False True VADPHNLKI 47.110078 336.1942 2163895.5 8657.0 ENSG00000115042|ENST00000233379|FAHD2A;;ENST00000463096.5_1_2:97749678-97751586:-|nuORF;;ENST00000470100.1_1_2:96076623-96078518:+|nuORF;;ENSG00000144199|ENST00000414820|FAHD2B;;ENST00000607780.5_1_2:96676383-96687353:+|nuORF 2.270593285560608 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8673 47.113 176.0 403330.0 25 0 56657.0 + 18185 KVADGLVKV 9 108 464.7961904550416 927.5778279768832 2 464.7968627810478 MULTI CID FTMS 0 0 0 8657 278621.0 1.0 0 0.0 16 Unmodified _KVADGLVKV_ ENSG00000137100|ENST00000259632|DCTN3;nc|ENSG00000137100|O75935-2|DCTN3;nc|ENSG00000137100|O75935-3|DCTN3 53.40400417844725 0.0329064971918313 4 KVAD{[VA]|[{I|L}G]}VKV 9 0 + 59.794 0.0 0.0 6.4462 6.4462 81.319 0.0 0.0 0.0 18.586784161984355 4.149733479708189 4.149733479708189 4.149733479708189 0 1.7931576817365436 1.0457574905606752 0.4247425010840047 0.3054621874040891 + + KVAD{[VA]|[{I|L}G]}VKV;KVAD{[VA]|[{I|L}G]}VVK;KVAD[R{I|L}]KV;KVAD[R{I|L}]VK;KVAD{[VA]|[{I|L}G]}KVV;{[QV]|[N{I|L}]|[RA]|[KV]}AEKV[RV];KK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[TP]VV;{[DA]|[EG]}VK[K{I|L}][RV];{[QV]|[N{I|L}]|[RA]|[KV]}AD[K{I|L}][RV];KK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VP]TV 6.4462;5.9989;5.939;5.4916;5.3345;1.5038;1.1465;0.9908;0.70277;0.61504 +;-;-;-;-;-;-;-;-;- + 865 + 1 1.726 58069.3 1.0 4127 4544 8657 HBL1_DMSO_200M_050219_2,8673 HBL1_DMSO_200M_050219_2,8673,KVADGLVKV True True KVADGLVKV 47.113497 464.796862781048 1449483.375 8657.0 ENSG00000137100|ENST00000259632|DCTN3;;nc|ENSG00000137100|O75935-2|DCTN3;;nc|ENSG00000137100|O75935-3|DCTN3 3.435924768447876 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8674 47.117 187.0 364790.0 25 0 30804.0 -1 VPLDGRPMNI 10 86 564.2970550918537 1126.5795572505074 2 564.2980834841728 MULTI CID FTMS 0 0 0 8657 235764.484375 0.3562679569221813 -2 0.2126655578613281 17 Oxidation (M) _VPLDGRPM(Oxidation (M))NI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 18.373094154950223 0.5392593366289069 4 VP{I|L}D 4 -1 52.652 0.0 0.0 4.6736 0.0 0.0 0.0 699.3264994315846 699.3264994315846 14.746687923431097 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.0 0.0 VP{I|L}D 4.6736 + + 276 + 1 1.726 62222.9 1.0 4128 4544 8657 HBL1_DMSO_200M_050219_2,8674 HBL1_DMSO_200M_050219_2,8674,VPLDGRPMNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8675 47.121 220.0 398800.0 25 0 59006.0 + -1 MVERTLMRV 9 116 384.208173008248 1149.602689624944 3 384.2083923220634 MULTI CID FTMS 0 0 0 8657 247024.25 0.1452168423537133 3 -0.2945632934570312 18 Oxidation (M) _M(Oxidation (M))VERTLMRV_ REV__ENSG00000124571|ENST00000265351|XPO5;REV__ENST00000450462.6_1_6:43495291-43496568:-|nuORF 7.608950283845883 0.6490595679007971 4 {M(Oxidation (M))|F}A{M(Oxidation (M))|F} 3 -1 24.693 0.0 0.0 2.1479 0.0 0.0 766.4515188259192 0.0 766.4515188259192 0.0 8.064250275506875 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}A{M(Oxidation (M))|F} 2.1479 - 119 + 1 1.726 76032.3 1.0 4129 4544 8657 HBL1_DMSO_200M_050219_2,8675 HBL1_DMSO_200M_050219_2,8675,MVERTLMRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8676 47.128 363.0 258830.0 25 0 25763.0 -1 LSSEFFFMGG 10 121 569.2485632693979 1136.4825736055957 2 569.2498046755791 MULTI CID FTMS 0 0 0 8657 204553.921875 0.7937155728408873 4 -0.3892860412597656 19 Oxidation (M) _LSSEFFFM(Oxidation (M))GG_ ENST00000304061.7_1_14:73959881-73960067:+|nuORF 14.838274106304384 0.5985701837916485 4 [QP]SVTE 6 -1 31.577 0.0 0.0 2.7785 0.0 0.0 0.0 492.15846469194383 492.15846469194383 4.291647819647249 0.0 0.0 0.0 0 0.0 0.6020599913279624 1.0941876774005248 0.0 [QP]SVTE 2.7785 - 503 1 1.726 79070.4 1.0 4130 4544 8657 HBL1_DMSO_200M_050219_2,8676 HBL1_DMSO_200M_050219_2,8676,LSSEFFFMGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8677 47.143 800.0 183370.0 25 0 9613.0 + 38671 TTLDEKIEKV 10 155 588.3293067744046 1174.644060615609 2 588.3296996951103 MULTI CID FTMS 0 0 0 8657 202634.515625 0.9169992058656344 -1 0.129058837890625 20 Unmodified _TTLDEKIEKV_ ENSG00000124228|ENST00000618172|DDX27;ENST00000484427.5_1_20:47835892-47850293:+|nuORF;nc|ENSG00000124228|Q96GQ7|DDX27 108.26204199777034 0.0037791241451545 4 TT{I|L}DEK{I|L}EVK 10 2 + 108.32 0.0 0.0 9.2217 9.2217 81.47 0.0 0.0 0.0 27.663029689254984 0.8857222971200827 0.8857222971200827 0.8857222971200827 0 2.293157681736544 1.6989700043360187 1.3684151806525389 0.8764613514953892 TT{I|L}DEK{I|L}EVK;TT{I|L}DEK{I|L}EKV;TTVEEK{I|L}EVK;TTVEEK{I|L}EKV;TT{I|L}WW{I|L}EVK;TT{I|L}WW{I|L}EKV;TT{I|L}DEK{I|L}[VG]TV;TT{I|L}DEK{I|L}[VG]S{I|L};TTVEEK{I|L}[VG]TV;TT{I|L}DEK{I|L}{[TV]|[{I|L}S]}GV 9.2217;9.1463;8.5132;8.4378;7.3133;7.2379;7.0883;6.7909;6.3798;6.3696 -;+;-;-;-;-;-;-;-;- + 8914 + 1 1.726 109013.1 0.8600000143051147 4131 4544 8657 HBL1_DMSO_200M_050219_2,8677 HBL1_DMSO_200M_050219_2,8677,TTLDEKIEKV True True TTLDEKIEKV 47.142809 588.32969969511 1444534.75 8657.0 ENST00000484427.5_1_20:47835892-47850293:+|nuORF;;ENSG00000124228|ENST00000618172|DDX27;;nc|ENSG00000124228|Q96GQ7|DDX27 6.929821491241455 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8679 47.148 41.0 1444800.0 25 0 247670.0 + 5762 DPPDGIKV 8 70 420.7265342156436 839.4385154980872 2 420.7267333865166 MULTI CID FTMS 0 0 0 8678 1337502.625 0.7681562527257828 -3 0.2844352722167969 1 Unmodified _DPPDGIKV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 36.12702656103203 0.299085846329477 4 DPPD{[VA]|[{I|L}G]}KV 8 0 + 67.331 0.0 0.0 8.0209 8.0209 97.392 0.0 0.0 0.0 41.58706824318763 5.150312510170778 5.150312510170778 67.33078780285204 0 0.75 2.0 0.4247425010840047 0.0 + + DPPD{[VA]|[{I|L}G]}KV 8.0209 + + 103 + 1 1.726 52210.0 1.0 4132 4545 8678 HBL1_DMSO_200M_050219_2,8679 HBL1_DMSO_200M_050219_2,8679,DPPDGIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8680 47.149 56.0 808280.0 25 0 46920.0 + 9984 FPHPVNQV 8 91 469.2496579219887 0 469.2489196658134 PEAK CID FTMS 0 0 0 8678 819160.25 0.7601722163153105 1 -0.0990333557128906 2 Unmodified _FPHPVNQV_ ENSG00000070061|ENST00000374647|ELP1 15.768221252438446 0.4767174489346095 4 {M(Oxidation (M))|F} 1 7 6.9897 0.0 0.0 0.74638 0.0 0.0 555.3054854222994 231.08860193424064 786.39408735654 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.74638 + + 63 + 1 1.726 40343.6 1.0 4133 4545 8678 HBL1_DMSO_200M_050219_2,8680 HBL1_DMSO_200M_050219_2,8680,FPHPVNQV False True FPHPVNQV 47.148934 469.248919665813 8715165.0 8678.0 ENSG00000070061|ENST00000374647|ELP1 7.485182762145996 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8681 47.15 41.0 1054800.0 25 0 104050.0 + 2722 ATGENLPRV 9 74 478.76156667719874 955.5085804211976 2 478.7618286013603 MULTI CID FTMS 0 0 0 8678 1064336.625 0.5392200639905991 -3 0.2844352722167969 3 Unmodified _ATGENLPRV_ ENSG00000166181|ENST00000531273|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-6|API5 41.8396318013385 0.0653578398400075 4 [TA]GEN{I|L}V[RP] 9 2 + 75.864 0.0 0.0 7.9396 7.9396 79.768 0.0 0.0 0.0 27.147642715192504 0.9374928204258026 0.9374928204258026 0.9374928204258026 0 0.8494850021680094 2.0 0.0 0.8494850021680094 [TA]GEN{I|L}V[RP];[TA]GEN{I|L}PRV;[TA]GEGG{I|L}V[RP];[TA]GEGG{I|L}PRV 7.9396;7.8415;6.9759;6.8778 -;+;-;- + 127 + 1 1.726 39270.2 1.0 4134 4545 8678 HBL1_DMSO_200M_050219_2,8681 HBL1_DMSO_200M_050219_2,8681,ATGENLPRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8682 47.152 55.0 1588900.0 25 0 223140.0 + 43112 VYPDGIRHI 9 86 357.19790174895763 1068.571875847073 3 357.1978027224541 MULTI CID FTMS 0 0 0 8678 993899.5 0.2014050741580989 -2 0.2008285522460937 4 Unmodified _VYPDGIRHI_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 32.30548876998284 0.1201446275138228 4 [YV]P{I|L}DGRH{I|L} 9 2 + 69.123 0.0 0.0 6.4687 6.4687 74.052 0.0 0.0 0.0 49.45677228596267 10.846755565910442 10.846755565910442 0.2422750325201406 0 0.3252574989159953 2.0 0.3252574989159953 0.3054621874040891 [YV]P{I|L}DGRH{I|L};[YV]PD{I|L}GRH{I|L};[YV]{I|L}PDGRH{I|L};[PS][{I|L}P]{[DS]|[MA]|[CV]|TT}P{I|L}M{I|L};[PS][{I|L}P]{[DS]|[MA]|[CV]|TT}{I|L}PM{I|L} 6.4687;6.446;6.2282;1.4277;1.3824 -;-;-;-;- 166 + 1 1.726 86802.4 1.0 4135 4545 8678 HBL1_DMSO_200M_050219_2,8682 HBL1_DMSO_200M_050219_2,8682,VYPDGIRHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8683 47.153 71.0 886440.0 25 0 169010.0 + 5850 DPVPEVRTV 9 72 506.277596089022 1010.540639244844 2 506.2776977419853 MULTI CID FTMS 0 0 0 8678 708792.8125 0.4689484717958591 -2 0.2008285522460937 5 Unmodified _DPVPEVRTV_ ENSG00000089154|ENST00000300648|GCN1 36.506200033944 0.094635877243972 4 [DP]VPEV 6 3 57.396 0.0 0.0 5.6797 0.0 0.0 0.0 371.2035616510376 371.2035616510376 48.44335023848103 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.3494850021680094 0.0 + [DP]VPEV 5.6797 + + 46 + 1 1.726 52590.9 1.0 4136 4545 8678 HBL1_DMSO_200M_050219_2,8683 HBL1_DMSO_200M_050219_2,8683,DPVPEVRTV True True DPVPEVRTV 47.153182 506.277697741985 33943084.0 8678.0 ENSG00000089154|ENST00000300648|GCN1 7.044559319814046 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8684 47.155 95.0 762950.0 25 0 102330.0 + 25765 NIVERVKEV 9 97 543.3199353182563 1084.6253177033125 2 543.3201171755791 MULTI CID FTMS 0 0 0 8678 507420.96875 0.3745313477127794 -1 0.0717697143554687 6 Unmodified _NIVERVKEV_ ENSG00000132274|ENST00000379965|TRIM22;ENST00000460454.1_1_11:5717462-5717939:+|nuORF;nc|ENSG00000132274|Q8IYM9-2|TRIM22 65.47368725323818 0.0230515101691092 4 N{I|L}VE[RV]KEV 9 0 + 79.166 0.0 0.0 7.2989 7.2989 92.935 0.0 0.0 0.0 45.22602016971358 16.567049382039045 16.567049382039045 14.380169195530245 0 1.774227503252014 2.0 1.2302046884880935 0.3494850021680094 + + N{I|L}VE[RV]KEV;{[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VAREV;{[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VA[VG]EV;{[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VAWVV;{[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VEQVV;{[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VA{[DA]|[EG]}VV;{[QV]|[N{I|L}]|[RA]|[KV]}VESVVQVV;{NN|[MP]|[D{I|L}]|[EV]}RKVAREV;{[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VE[AG]VV;[AG]VV[VS]VAREV 7.2989;5.9731;5.1282;4.9736;4.696;4.1286;4.1092;3.8938;3.8511;3.8447 +;-;-;-;-;-;-;-;-;- + 595 + 1 1.726 61915.1 1.0 4137 4545 8678 HBL1_DMSO_200M_050219_2,8684 HBL1_DMSO_200M_050219_2,8684,NIVERVKEV True True NIVERVKEV 47.155255 543.320117175579 8024790.0 8678.0 ENST00000460454.1_1_11:5717462-5717939:+|nuORF;;nc|ENSG00000132274|Q8IYM9-2|TRIM22;;ENSG00000132274|ENST00000379965|TRIM22 5.352754433949788 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8685 47.157 85.0 840500.0 25 0 71603.0 + 43114 VYPDGIRHI 9 90 535.2931034540663 1068.5716539749326 2 535.2917968630791 MULTI CID FTMS 0 0 0 8678 445396.53125 0.1953629583858086 -2 0.2008285522460937 7 Unmodified _VYPDGIRHI_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 29.081581746732265 0.1611639662936252 4 VYPD 4 5 57.423 0.0 0.0 5.3738 0.0 0.0 0.0 591.3381906432783 591.3381906432783 35.44090201101579 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + VYPD 5.3738 + + 227 + 1 1.726 62458.0 1.0 4138 4545 8678 HBL1_DMSO_200M_050219_2,8685 HBL1_DMSO_200M_050219_2,8685,VYPDGIRHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8686 47.16 157.0 504490.0 25 0 47249.0 + -1 IMMKDSDE 8 127 492.7027151056239 983.3908772780478 2 492.7032653689384 MULTI CID FTMS 0 0 0 8678 292551.53125 0.7228733757421564 1 -0.0990333557128906 8 Oxidation (M) _IM(Oxidation (M))MKDSDE_ REV__ENSG00000039139|ENST00000265104|DNAH5 8.593279151180031 0.7721714526254883 4 MPYK 4 -1 40.788 0.0 0.0 4.1477 0.0 0.0 0.0 461.1182039850219 461.1182039850219 21.78240169467604 0.0 0.0 0.0 0 0.2396518287104437 1.6989700043360187 0.0 0.0 MPYK 4.1477 - 319 + 1 1.726 66041.1 1.0 4139 4545 8678 HBL1_DMSO_200M_050219_2,8686 HBL1_DMSO_200M_050219_2,8686,IMMKDSDE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8687 47.164 182.0 545680.0 25 0 60861.0 + 15438 IPPSISRV 8 88 434.76587112779487 867.5171893223898 2 434.7662841677666 MULTI CID FTMS 0 0 0 8678 287736.1875 0.4824240014737482 5 -0.4864311218261719 9 Unmodified _IPPSISRV_ ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6-3|BRWD1;nc|ENSG00000185658|Q9NSI6-4|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1 19.256988751693697 0.6264283240490721 4 {I|L}PPS 4 4 52.735 0.0 0.0 6.0789 0.0 0.0 0.0 470.2739657037719 470.2739657037719 39.24024714504206 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}PPS 6.0789 + + 100 + 1 1.726 80199.3 1.0 4140 4545 8678 HBL1_DMSO_200M_050219_2,8687 HBL1_DMSO_200M_050219_2,8687,IPPSISRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8688 47.169 307.0 338860.0 25 0 30712.0 + 45890 YYRYPTGESY 10 113 649.7880678177471 1297.561582702294 2 649.7883788943291 MULTI CID FTMS 0 0 0 8678 246561.15625 0.570457239514176 -1 0.0717697143554687 10 Unmodified _YYRYPTGESY_ ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3 80.6760300276096 0.0165137828474802 4 YYRYPTGESY 10 0 + 95.768 0.0 0.0 7.3806 7.3806 88.584 0.0 0.0 0.0 8.392167202703746 71.19991174463715 8.392167202703746 8.010299956639813 0 1.3494850021680094 1.6989700043360187 0.805462187404089 0.2614393726401688 + + YYRYPTGESY;YYRYPTGTDY;YYAGM{[ET]|[MV]}[{I|L}T]SY;YYRYPGTESY;YYQM{[ET]|[MV]}[{I|L}T]SY;YY[VG]YPTWSY;YYRYPGTTDY;YYR{[ET]|[MV]}MWSY;YYYYY[{I|L}T]SY;YYAT[WM][{I|L}T]SY 7.3806;6.7633;6.5913;6.5146;6.0845;5.966;5.8972;5.6641;5.6215;5.5862 +;-;-;-;-;-;-;-;-;- + 3023 1 1.726 80398.3 1.0 4141 4545 8678 HBL1_DMSO_200M_050219_2,8688 HBL1_DMSO_200M_050219_2,8688,YYRYPTGESY True True YYRYPTGESY 47.169396 649.788378894329 3555046.0 8678.0 ENSG00000170525|ENST00000379775|PFKFB3;;nc|ENSG00000170525|Q16875-3|PFKFB3;;nc|ENSG00000170525|Q16875-4|PFKFB3;;nc|ENSG00000170525|Q16875-2|PFKFB3 7.492126146952311 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8689 47.173 197.0 337320.0 25 0 23406.0 + 5557 DMLQVRKV 8 93 494.7842046938149 987.5538564544296 2 494.7845336794853 MULTI CID FTMS 0 0 0 8678 237391.875 0.8418071370330469 -1 0.0717697143554687 11 Unmodified _DMLQVRKV_ ENSG00000114742|ENST00000302313|WDR48;ENST00000466405.1_1_3:39133106-39135740:+|nuORF;nc|ENSG00000114742|Q8TAF3-2|WDR48;nc|ENSG00000114742|Q8TAF3-3|WDR48;nc|ENSG00000114742|Q8TAF3-4|WDR48;nc|ENSG00000114742|Q8TAF3-5|WDR48 45.69961567697781 0.159474709770503 4 [MD]{I|L}QVRKV 8 0 + 68.665 0.0 0.0 6.953 6.953 90.058 0.0 0.0 0.0 56.19070971708595 10.204262829037845 10.204262829037845 9.262137858390815 0 1.2302046884880935 2.0 0.0 0.4247425010840047 + + [MD]{I|L}QVRKV;[MD]{I|L}[AG]VRKV 6.953;6.0151 +;- + 106 + 1 1.726 56288.9 1.0 4142 4545 8678 HBL1_DMSO_200M_050219_2,8689 HBL1_DMSO_200M_050219_2,8689,DMLQVRKV False True DMLQVRKV 47.173163 494.7843 1738632.375 8678.0 ENSG00000114742|ENST00000302313|WDR48;;nc|ENSG00000114742|Q8TAF3-5|WDR48;;nc|ENSG00000114742|Q8TAF3-2|WDR48;;nc|ENSG00000114742|Q8TAF3-3|WDR48;;ENST00000466405.1_1_3:39133106-39135740:+|nuORF;;nc|ENSG00000114742|Q8TAF3-4|WDR48 4.845166365305583 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8690 47.178 281.0 251270.0 25 0 39608.0 + 29386 QLAFMFCTV 9 110 530.2517917093169 1058.4890304854337 2 530.2517578005791 MULTI CID FTMS 0 0 0 8678 230846.703125 0.9573209068526491 -1 0.0717697143554687 12 Unmodified _QLAFMFCTV_ REV__ENST00000587362.5_1_19:19458179-19460169:+|nuORF 16.942295170755138 0.3780752226737986 4 [Q{I|L}][C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}PPAV 9 -1 + 33.795 0.0 0.0 3.1928 3.1928 68.051 0.0 0.0 0.0 7.892587542690922 3.357921019231931 3.357921019231931 3.357921019231931 0 0.3494850021680094 0.9208187539523752 0.0 0.0 [Q{I|L}][C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}PPAV;[Q{I|L}][C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}PPG{I|L} 3.1928;2.8756 -;- 154 + 1 1.726 58190.3 1.0 4143 4545 8678 HBL1_DMSO_200M_050219_2,8690 HBL1_DMSO_200M_050219_2,8690,QLAFMFCTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8691 47.183 230.0 519420.0 25 0 63824.0 + -1 VAPNRPCWQI 10 109 414.2139122865465 1239.6199074598396 3 414.2140075564384 MULTI CID FTMS 0 0 0 8678 209729.828125 0.6220840020236359 -1 0.0717697143554687 13 Carbamidomethyl (C) _VAPNRPC(Carbamidomethyl (C))WQI_ REV__ENSG00000138674|ENST00000395310|SEC31A;REV__ENST00000436790.6_1_4:83784452-83812260:-|nuORF;REV__nc|ENSG00000138674|O94979-10|SEC31A;REV__nc|ENSG00000138674|O94979-2|SEC31A;REV__nc|ENSG00000138674|O94979-3|SEC31A;REV__nc|ENSG00000138674|O94979-4|SEC31A;REV__nc|ENSG00000138674|O94979-5|SEC31A;REV__nc|ENSG00000138674|O94979-6|SEC31A;REV__nc|ENSG00000138674|O94979-7|SEC31A;REV__nc|ENSG00000138674|O94979-8|SEC31A;REV__nc|ENSG00000138674|O94979-9|SEC31A 22.65808497894818 0.4596126414678359 4 VA 2 -1 31.498 0.0 0.0 2.5409 0.0 0.0 0.0 1066.4937935616542 1066.4937935616542 12.15706701743672 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 0.0 0.0 VA 2.5409 + + 58 + 1 1.726 95763.4 1.0 4144 4545 8678 HBL1_DMSO_200M_050219_2,8691 HBL1_DMSO_200M_050219_2,8691,VAPNRPCWQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8692 47.188 318.0 356000.0 25 0 42343.0 12529 GVGLKGGV 8 137 343.7137488884839 685.4129448437678 2 343.7134582400322 MULTI CID FTMS 0 0 0 8678 188629.328125 0.9336072893320414 -1 0.0717697143554687 14 Unmodified _GVGLKGGV_ nc|ENSG00000179094|O15534-4|PER1 6.354104778181461 0.7857632046190106 4 {[QN]|[E{I|L}]|[KN]}{I|L}RGV 6 5 + 42.96 0.0 0.0 6.2677 6.2677 91.117 0.0 0.0 0.0 15.468720308713834 8.309710622901214 8.309710622901214 29.30523450795789 0 0.2215141619232908 1.6989700043360187 0.0 0.2742275032520141 {[QN]|[E{I|L}]|[KN]}{I|L}RGV;{[QN]|[E{I|L}]|[KN]}TKPV;{[QN]|[E{I|L}]|[KN]}TKVP 6.2677;1.9922;0.92791 -;-;- 99 + 1 1.726 93109.5 1.0 4145 4545 8678 HBL1_DMSO_200M_050219_2,8692 HBL1_DMSO_200M_050219_2,8692,GVGLKGGV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 8693 47.202 800.0 169630.0 25 0 19146.0 6407 DYRWPMRYDQW 11 78 808.359608939308 1614.704664945416 2 808.3621093630791 MULTI CID FTMS 0 0 0 8678 167720.734375 1.0 0 0.0 15 Unmodified _DYRWPMRYDQW_ ENSG00000126107|ENST00000372172|HECTD3;nc|ENSG00000126107|Q5T447-2|HECTD3 0.3070304955306653 0.8736993455979228 4 {M(Oxidation (M))|F}ANQQAEHAYQ 11 11 86.459 0.0 0.0 5.3545 0.0 0.0 309.12701465987794 0.0 309.12701465987794 0.0 75.03261100997574 0.0 0.0 0 0.6677353201839438 0.0 0.0 1.9049471895720984 {M(Oxidation (M))|F}ANQQAEHAYQ 5.3545 - 3037 + 1 1.726 99639.3 0.6899999976158142 4146 4545 8678 HBL1_DMSO_200M_050219_2,8693 HBL1_DMSO_200M_050219_2,8693,DYRWPMRYDQW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8694 47.209 382.0 295480.0 25 0 23058.0 + 16250 IVRDHWVHV 9 148 387.548572806446 1159.623889019538 3 387.5489379763603 MULTI CID FTMS 0 0 0 8678 158015.453125 1.0 0 0.0 16 Unmodified _IVRDHWVHV_ ENSG00000183648|ENST00000605997|NDUFB1;ENST00000435191.1_1_3:48223039-48223213:+|nuORF;nc|ENSG00000183648|O75438-2|NDUFB1 26.268140514670165 0.1969607489560049 4 [HV]WVVWVHV 9 4 + 41.409 0.0 0.0 3.5709 3.5709 76.335 0.0 0.0 0.0 12.631288188505678 22.62411032270769 12.631288188505678 9.208187539523747 0 1.3539171939081172 1.3979400086720375 0.0 0.0 [HV]WVVWVHV;[HV]WVV{[DA]|[EG]}VHV;[HV]WVV[DG]{I|L}HV;[HV]W[RD]{I|L}VHV;[HV]W[RD]V{I|L}HV;[HV]WV[RD]{I|L}HV;[HV][RH][YN]VHV;{I|L}[HM]CP[KP]VHV;{I|L}[HM]CP[KP]VVH;[HV]WVV[SG]{I|L}[YT] 3.5709;2.7769;2.7302;2.4501;2.4034;2.0602;1.8215;1.716;1.5247;1.4564 -;-;-;-;-;-;-;-;-;- 751 1 1.726 91518.9 1.0 4147 4545 8678 HBL1_DMSO_200M_050219_2,8694 HBL1_DMSO_200M_050219_2,8694,IVRDHWVHV False True IVRDHWVHV 47.209155 387.54893797636 1320807.125 8678.0 ENST00000435191.1_1_3:48223039-48223213:+|nuORF;;ENSG00000183648|ENST00000605997|NDUFB1;;nc|ENSG00000183648|O75438-2|NDUFB1 7.275942166646321 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8695 47.223 800.0 161010.0 25 0 7733.3 39827 VEVTRPEWYD 10 149 647.3080717738835 1292.601590614567 2 647.3076049685478 MULTI CID FTMS 0 0 0 8678 118428.5859375 1.0 0 0.0 17 Unmodified _VEVTRPEWYD_ ENSG00000125207|ENST00000245255|PIWIL1;nc|ENSG00000125207|Q96J94-2|PIWIL1;nc|ENSG00000125207|Q96J94-3|PIWIL1 14.838274106304384 0.5985701837916485 4 PS{I|L}TYVTS{I|L} 9 9 42.915 0.0 0.0 3.32 0.0 0.0 313.06749894625153 0.0 313.06749894625153 0.0 22.79842888942261 0.0 0.0 0 0.0 0.0 2.437273075074786 0.0 PS{I|L}TYVTS{I|L} 3.32 - 1979 + 1 1.726 95780.7 0.6499999761581421 4148 4545 8678 HBL1_DMSO_200M_050219_2,8695 HBL1_DMSO_200M_050219_2,8695,VEVTRPEWYD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8696 47.228 192.0 535630.0 25 0 28564.0 + 11849 GLRVSLSSAPV 11 148 362.5485722840498 0 362.5485107302666 PEAK CID FTMS 0 0 0 8678 112196.5625 0.4499569536264071 -1 0.0717697143554687 18 Unmodified _GLRVSLSSAPV_ REV__ENSG00000126217|ENST00000535094|MCF2L;REV__ENST00000397030.5_1_13:113750822-113750996:+|nuORF;REV__ENST00000469415.1_1_13:113748772-113751170:+|nuORF;REV__ENST00000488765.1_1_13:113750837-113751170:+|nuORF;REV__nc|ENSG00000126217|O15068-10|MCF2L;REV__nc|ENSG00000126217|O15068-6|MCF2L;REV__nc|ENSG00000126217|O15068-8|MCF2L;REV__nc|ENSG00000126217|O15068|MCF2L 22.736283301280096 0.3186971331110387 4 GG 2 -1 9.464 0.0 0.0 1.3088 0.0 0.0 523.9503112167341 82.06685053043202 606.0171617471661 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GG 1.3088 - 126 + 1 1.726 90860.2 1.0 4149 4545 8678 HBL1_DMSO_200M_050219_2,8696 HBL1_DMSO_200M_050219_2,8696,GLRVSLSSAPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8697 47.242 800.0 80436.0 25 0 5130.6 -1 KDEEDYKRYRC 11 99 781.3547649521153 1560.6949769710304 2 781.8572875857353 MULTI CID FTMS 0 0 0 8678 98188.4375 0.7535919393774412 5 -0.4864311218261719 19 Carbamidomethyl (C) _KDEEDYKRYRC(Carbamidomethyl (C))_ ENSG00000148655|ENST00000611255|LRMDA;ENST00000593699.5_1_10:77643188-78317043:+|nuORF;nc|ENSG00000148655|Q9H2I8|LRMDA 1.3295316138638542 0.8688751186870782 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{NN|[MP]|[D{I|L}]|[EV]}[TP]AQQW 10 -1 27.101 0.0 0.0 1.7365 0.0 0.0 0.0 324.1183275024586 324.1183275024586 15.11107503885448 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{NN|[MP]|[D{I|L}]|[EV]}[TP]AQQW 1.7365 - 625 1 1.726 49479.3 0.5099999904632568 4150 4545 8678 HBL1_DMSO_200M_050219_2,8697 HBL1_DMSO_200M_050219_2,8697,KDEEDYKRYRC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8699 47.247 60.0 880030.0 25 0 97463.0 + 25000 MPPPPPQGV 9 82 460.23852327962805 918.462493626056 2 460.2390319705009 MULTI CID FTMS 0 0 0 8698 842152.3125 0.0454430294690613 88 -6.993598937988281 1 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 56.541270873467816 0.0279970378729908 4 [VG]EHP[QP]R 8 6 + 45.393 0.0 0.0 4.9422 4.9422 78.067 0.0 0.0 0.0 6.575773191777934 13.407530563305802 6.575773191777934 6.575773191777934 0 1.1861818737241734 1.6989700043360187 0.0 0.0 [VG]EHP[QP]R;{NN|[MP]|[D{I|L}]|[EV]}PPP[QP]R;[VG]EPH[QP]R;[QP]PPPG[NG]R;{[HG]|PP}MPP[QP][VG];{[HG]|PP}QPPG[NG]R;[QP]PPP{NN|[MP]|[D{I|L}]|[EV]}R;{[HG]|PP}QPP{NN|[MP]|[D{I|L}]|[EV]}R;[QP][YK]G[NG]R;{[HG]|PP}[AG]PPG[NG]R 4.9422;4.2263;3.8722;3.8464;3.4825;3.1909;3.0883;2.4328;2.4106;1.8078 -;-;-;-;-;-;-;-;-;- 261 1 1.733 46752.0 1.0 4151 4546 8698 HBL1_DMSO_200M_050219_2,8699 HBL1_DMSO_200M_050219_2,8699,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8700 47.25 118.0 526210.0 25 0 95335.0 + -1 DFGCHSVMECW 11 66 693.7474415058103 1385.4803300784206 2 693.7486450076103 MULTI CID FTMS 0 0 0 8698 630646.625 1.0 0 0.0 2 Carbamidomethyl (C),Oxidation (M) _DFGCHSVM(Oxidation (M))EC(Carbamidomethyl (C))W_ REV__L1PA6_dup546|chr2:49227587-49231532:-|1.156546377819926|0.2927699401366612|1.98|48.0|121|1|anti-sense 1.3295316138638542 0.8688751186870782 4 {[{M(Oxidation (M))|F}D]|MM}{[SA]|[TG]}YGD{M(Oxidation (M))|F}V 9 -1 33.963 0.0 0.0 2.4513 0.0 0.0 0.0 381.13459263817657 381.13459263817657 23.50501891384966 0.0 0.0 0.0 0 0.0 0.0 1.110924374808178 0.0 {[{M(Oxidation (M))|F}D]|MM}{[SA]|[TG]}YGD{M(Oxidation (M))|F}V 2.4513 - 85 1 1.733 50465.1 1.0 4152 4546 8698 HBL1_DMSO_200M_050219_2,8700 HBL1_DMSO_200M_050219_2,8700,DFGCHSVMECW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8701 47.251 66.0 1495000.0 25 0 138800.0 + 39217 TYVTPRRPF 9 95 379.5453070792246 1135.6140918378735 3 379.5451843142509 MULTI CID FTMS 0 0 0 8698 832692.375 0.5224742617344256 -2 0.1708030700683593 3 Unmodified _TYVTPRRPF_ ENSG00000170889|ENST00000302907|RPS9;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 41.8396318013385 0.0653578398400075 4 TYVT[RP]R{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 9 0 + 56.314 0.0 0.0 4.9589 4.9589 86.559 0.0 0.0 0.0 41.39990397547555 2.196596782814808 2.196596782814808 56.31379887118142 0 0.2887254899964357 2.0 0.3807196863200844 0.8807196863200843 + + TYVT[RP]R{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.9589 + + 111 + 1 1.733 87930.1 1.0 4153 4546 8698 HBL1_DMSO_200M_050219_2,8701 HBL1_DMSO_200M_050219_2,8701,TYVTPRRPF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8702 47.254 133.0 605830.0 25 0 57911.0 + 32417 SAAHAIVSV 9 103 427.73968172392784 853.4648105146557 2 427.7403137087822 MULTI CID FTMS 0 0 0 8698 510149.25 1.0 0 0.0 4 Unmodified _SAAHAIVSV_ ENSG00000116001|ENST00000433529|TIA1;ENSG00000151923|ENST00000436547|TIAL1;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1;nc|ENSG00000151923|Q01085-2|TIAL1 25.399314129420983 0.2080152500878129 4 [HA]ASA{I|L}VSV 9 2 + 37.871 0.0 0.0 4.4373 4.4373 67.604 0.0 0.0 0.0 0.915149811213503 23.26660305958029 0.915149811213503 1.1270428019128855 0 0.7742275032520141 0.0 0.3807196863200844 0.0 [HA]ASA{I|L}VSV;[VS][HN]{I|L}VSV;{[SA]|[TG]}[HA]A{I|L}VSV;[HA][QT]{I|L}VSV;[HA]{I|L}[QT]VSV;[HA]{I|L}A{[SA]|[TG]}VSV;[HA]A{I|L}{[SA]|[TG]}VSV;[HA][WR]VSV;[R{M(Oxidation (M))|F}]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KG];[R{M(Oxidation (M))|F}][QT][R{M(Oxidation (M))|F}] 4.4373;4.3052;3.9462;2.5394;1.9273;1.5683;1.4749;1.3423;0.89587;0.64669 -;-;+;-;-;-;-;-;-;- + 117 1 1.733 66364.0 1.0 4154 4546 8698 HBL1_DMSO_200M_050219_2,8702 HBL1_DMSO_200M_050219_2,8702,SAAHAIVSV False True SAAHAIVSV 47.25386 427.740313708782 4202209.5 8698.0 nc|ENSG00000151923|Q01085-2|TIAL1;;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;;ENSG00000151923|ENST00000436547|TIAL1;;nc|ENSG00000116001|P31483-2|TIA1;;ENSG00000116001|ENST00000433529|TIA1;;ENST00000482876.5_1_2:70442329-70444102:-|nuORF 6.043540159861247 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8703 47.257 136.0 280230.0 25 0 23354.0 -1 VPVTLCMVVV 10 86 538.2982266887424 1074.5819004442849 2 538.2989990115166 MULTI CID FTMS 0 0 0 8698 349311.0625 0.377998835225849 -2 0.1708030700683593 5 Oxidation (M) _VPVTLCM(Oxidation (M))VVV_ ENSG00000080815|ENST00000324501|PSEN1;nc|ENSG00000080815|P49768-2|PSEN1;nc|ENSG00000080815|P49768-3|PSEN1;nc|ENSG00000080815|P49768-4|PSEN1;nc|ENSG00000080815|P49768-5|PSEN1;nc|ENSG00000080815|P49768-6|PSEN1;nc|ENSG00000080815|P49768-7|PSEN1 11.640296217721598 0.652229146672156 4 [VP]TV 4 -1 23.901 0.0 0.0 2.2242 0.0 0.0 0.0 675.3211942277409 675.3211942277409 11.682437647924218 0.0 0.0 0.0 0 0.0 1.0 1.0 0.0 [VP]TV 2.2242 - 66 1 1.733 35414.1 1.0 4155 4546 8698 HBL1_DMSO_200M_050219_2,8703 HBL1_DMSO_200M_050219_2,8703,VPVTLCMVVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8704 47.26 178.0 449330.0 25 0 96197.0 + -1 SLLSLARMVM 10 84 568.8132453627392 1135.6119377922782 2 568.8139526247978 MULTI CID FTMS 0 0 0 8698 317879.40625 0.5065258870877227 -2 0.1708030700683593 6 Oxidation (M) _SLLSLARMVM(Oxidation (M))_ REV__ENSG00000103657|ENST00000443617|HERC1 18.1463463914782 0.5430639438673815 4 {[TV]|[{I|L}S]}[NP]TE 6 -1 33.42 0.0 0.0 2.9429 0.0 0.0 0.0 491.2870225913595 491.2870225913595 0.338096733120274 0.0 0.0 0.0 0 0.5 2.0 0.9802046884880936 0.0 {[TV]|[{I|L}S]}[NP]TE 2.9429 - 261 1 1.733 68943.2 1.0 4156 4546 8698 HBL1_DMSO_200M_050219_2,8704 HBL1_DMSO_200M_050219_2,8704,SLLSLARMVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8705 47.263 165.0 475120.0 25 0 27352.0 + 28107 PPLRTPPLS 9 104 489.2925132183994 976.5704735035988 2 489.2926513552666 MULTI CID FTMS 0 0 0 8698 280244.59375 0.1917547583809222 -4 0.3834686279296875 7 Unmodified _PPLRTPPLS_ REV__ENST00000266085.6_1_22:33256171-33256252:+|nuORF 20.453626601364224 0.2830276176381075 4 [R{I|L}]PPP[TP]TV 9 -1 + 40.775 0.0 0.0 4.1753 4.1753 81.336 0.0 0.0 0.0 14.198763237279532 17.833508680319063 14.198763237279532 16.337783004243363 0 0.8957012980088059 0.9208187539523752 0.4247425010840047 0.0 [R{I|L}]PPP[TP]TV;[R{I|L}]PPP{[VA]|[{I|L}G]}{NN|[MP]|[D{I|L}]|[EV]};YV{I|L}{I|L}[RN]TV;[R{I|L}][YK][TP]TV;[{M(Oxidation (M))|F}V][K{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KV;YV{I|L}{I|L}[RN]S{I|L};YV[KP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KV;[{M(Oxidation (M))|F}V]{[VA]|[{I|L}G]}V{[ES]|[DT]|[{I|L}C]}KV;[{M(Oxidation (M))|F}V]{[QN]|[E{I|L}]|[KN]}[KQ]T{I|L};[{M(Oxidation (M))|F}V][R{I|L}]{[ES]|[DT]|[{I|L}C]}KV 4.1753;2.5024;2.2213;2.0931;1.642;1.5055;1.3337;1.2042;1.1442;0.54086 -;-;-;-;-;-;-;-;-;- 186 1 1.733 66694.3 1.0 4157 4546 8698 HBL1_DMSO_200M_050219_2,8705 HBL1_DMSO_200M_050219_2,8705,PPLRTPPLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8706 47.267 173.0 522130.0 25 0 48340.0 + -1 LGVCSYCEV 9 123 362.82440988503663 1085.45140025531 3 362.8243896365166 MULTI CID FTMS 0 0 0 8698 280758.4375 0.2483069534470514 -2 0.1708030700683593 8 2 Carbamidomethyl (C) _LGVC(Carbamidomethyl (C))SYC(Carbamidomethyl (C))EV_ REV__ENSG00000124466|ENST00000244333|LYPD3 8.155526934196011 0.6299788542272896 4 {[VA]|[{I|L}G]}ADD{M(Oxidation (M))|F} 6 -1 42.85 0.0 0.0 3.9477 0.0 0.0 0.0 464.1639012872841 464.1639012872841 22.611500145334585 0.0 0.0 0.0 0 0.2215141619232908 2.0 0.0 0.0 {[VA]|[{I|L}G]}ADD{M(Oxidation (M))|F} 3.9477 - 214 + 1 1.733 86524.4 1.0 4158 4546 8698 HBL1_DMSO_200M_050219_2,8706 HBL1_DMSO_200M_050219_2,8706,LGVCSYCEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8707 47.281 800.0 126500.0 25 0 30004.0 -1 0 48 1158.140302501088 3471.399078103464 3 1158.475878894329 MULTI CID FTMS 0 0 0 8698 269098.59375 0.1923072027141827 6 -0.567047119140625 9 4 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.27263 0.0 0.0 1797.616315507564 1466.6831940341467 3264.299509541711 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.27263 - 23 + 1 1.733 85012.5 0.7099999785423279 4159 4546 8698 HBL1_DMSO_200M_050219_2,8707 HBL1_DMSO_200M_050219_2,8707, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8708 47.283 131.0 406680.0 25 0 38743.0 -1 IHPHLLDMK 9 97 560.3027074007191 1118.590861868238 2 560.3032104372978 MULTI CID FTMS 0 0 0 8698 246747.53125 0.7713489265384393 1 -0.1237602233886718 10 Oxidation (M) _IHPHLLDM(Oxidation (M))K_ ENSG00000170456|ENST00000389082|DENND5B;ENSG00000184014|ENST00000328194|DENND5A;nc|ENSG00000170456|Q6ZUT9-2|DENND5B;nc|ENSG00000170456|Q6ZUT9-4|DENND5B;nc|ENSG00000184014|Q6IQ26-2|DENND5A 21.74664581756881 0.2544899275067181 4 [H{I|L}][YT][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 54.103 0.0 0.0 4.8367 4.8367 78.315 0.0 0.0 0.0 7.346368802282015 7.525749891599531 7.346368802282015 7.346368802282015 0 1.274227503252014 1.6989700043360187 0.4247425010840047 0.0 [H{I|L}][YT][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[PS][{I|L}P]T{M(Oxidation (M))|F}K;{[DS]|[MA]|[CV]|TT}K[PS][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[PS][{I|L}P]TT{[CA]|SS};[{I|L}A]D[KS][{I|L}P]T{M(Oxidation (M))|F}K;{[DS]|[MA]|[CV]|TT}P[KS][{I|L}P]T{M(Oxidation (M))|F}K;[HT][Y{I|L}][{I|L}P]T{M(Oxidation (M))|F}K;{[TV]|[{I|L}S]}[WQ][{I|L}P]T{M(Oxidation (M))|F}K;[H{I|L}][YT][{I|L}P]R[YG];{[DS]|[MA]|[CV]|TT}K[PS][{I|L}P]TT{[CA]|SS} 4.8367;4.1799;3.3446;3.2021;2.9751;2.9637;2.8492;2.7561;2.6701;2.3667 -;-;-;-;-;-;-;-;-;- 496 1 1.733 44981.3 1.0 4160 4546 8698 HBL1_DMSO_200M_050219_2,8708 HBL1_DMSO_200M_050219_2,8708,IHPHLLDMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8709 47.292 483.0 299100.0 25 0 22090.0 + 41522 VPNNKITVV 9 148 492.2974984222936 982.5804439113872 2 492.2984191775322 MULTI CID FTMS 0 0 0 8698 219863.96875 0.0044288417816877 18 -1.5428619384765625 11 Unmodified _VPNNKITVV_ ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF 43.77239144664712 0.0547478964384323 4 [VP]EQ{I|L}TVV 8 3 45.157 0.0 0.0 4.5957 0.0 0.0 0.0 114.0590936894868 114.0590936894868 13.685625271001172 0.0 0.0 0.0 0 1.174742501084005 1.3010299956639813 1.066901560044258 0.0 [VP]EQ{I|L}TVV 4.5957 - 948 1 1.733 110902.2 1.0 4161 4546 8698 HBL1_DMSO_200M_050219_2,8709 HBL1_DMSO_200M_050219_2,8709,VPNNKITVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8710 47.301 510.0 272960.0 25 0 19973.0 + 16077 ITPQTIHGV 9 144 483.27356313541054 964.5325733376212 2 483.2746459841728 MULTI CID FTMS 0 0 0 8698 140884.0 1.0 0 0.0 12 Unmodified _ITPQTIHGV_ ENSG00000172845|ENST00000310015|SP3;nc|ENSG00000172845|Q02447-2|SP3;nc|ENSG00000172845|Q02447-3|SP3;nc|ENSG00000172845|Q02447-4|SP3;nc|ENSG00000172845|Q02447-5|SP3;nc|ENSG00000172845|Q02447-6|SP3 36.12702656103203 0.0967173616627612 4 [{I|L}T]PQ 4 5 43.243 0.0 0.0 4.4833 0.0 0.0 0.0 522.2703341119749 522.2703341119749 22.7608172076878 0.0 0.0 0.0 0 0.6643943297944485 2.0 0.0 0.7302046884880937 + [{I|L}T]PQ 4.4833 + + 667 + 1 1.733 109700.3 1.0 4162 4546 8698 HBL1_DMSO_200M_050219_2,8710 HBL1_DMSO_200M_050219_2,8710,ITPQTIHGV True True ITPQTIHGV 47.30074 483.274645984173 964047.1875 8698.0 nc|ENSG00000172845|Q02447-3|SP3;;nc|ENSG00000172845|Q02447-2|SP3;;nc|ENSG00000172845|Q02447-6|SP3;;nc|ENSG00000172845|Q02447-5|SP3;;nc|ENSG00000172845|Q02447-4|SP3;;ENSG00000172845|ENST00000310015|SP3 5.2982180913289385 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8711 47.308 407.0 166480.0 25 0 8541.6 -1 YVIEDDVNM 9 123 557.2423283266795 0 557.2421142458916 PEAK CID FTMS 0 0 0 8698 109342.3828125 0.8106680171018569 1 -0.1237602233886718 13 Oxidation (M) _YVIEDDVNM(Oxidation (M))_ ENSG00000073111|ENST00000265056|MCM2;ENST00000468414.1_1_3:127336783-127340613:+|nuORF;ENST00000474964.5_1_3:127323572-127340613:+|nuORF 18.13498045792455 0.2189554373504223 4 VQT 3 -1 7.8483 0.0 0.0 0.70548 0.0 0.0 573.1997312609777 208.07302271060783 781.2727539715855 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 VQT 0.70548 - 110 + 1 1.733 58449.4 1.0 4163 4546 8698 HBL1_DMSO_200M_050219_2,8711 HBL1_DMSO_200M_050219_2,8711,YVIEDDVNM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8712 47.323 800.0 95730.0 25 0 9679.2 -1 MCCTCTMLTA 10 99 640.7254335795211 1279.436314225842 2 640.7264892458916 MULTI CID FTMS 0 0 0 8698 115864.3828125 1.0 0 0.0 14 3 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))C(Carbamidomethyl (C))TC(Carbamidomethyl (C))TM(Oxidation (M))LTA_ ENSG00000113504|ENST00000264930|SLC12A7;nc|ENSG00000113504|Q9Y666-2|SLC12A7 3.5964929083625545 0.7100006075494749 4 WN{I|L} 3 -1 18.416 0.0 0.0 1.4394 0.0 0.0 848.2285023419937 0.0 848.2285023419937 0.0 6.540862452610078 0.0 0.0 0 0.0 0.0 0.0 0.0 WN{I|L} 1.4394 - 113 1 1.733 65205.9 0.6399999856948853 4164 4546 8698 HBL1_DMSO_200M_050219_2,8712 HBL1_DMSO_200M_050219_2,8712,MCCTCTMLTA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8713 47.337 800.0 55096.0 25 0 3069.8 + -1 VQPWCEVLWWF 11 76 775.3663836624337 1548.7182143916673 2 775.3671142458916 MULTI CID FTMS 0 0 0 8698 107363.515625 1.0 0 0.0 15 Carbamidomethyl (C) _VQPWC(Carbamidomethyl (C))EVLWWF_ REV__ENST00000409600.5_1_2:201680162-201680419:+|nuORF 5.731851221503515 0.8481046878870278 4 {[QV]|[N{I|L}]|[RA]|[KV]}NEEQ 6 -1 42.774 0.0 0.0 2.7619 0.0 0.0 0.0 818.3789156549436 818.3789156549436 1.6161809197543775 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}NEEQ 2.7619 - 88 + 1 1.733 35379.0 0.5600000023841858 4165 4546 8698 HBL1_DMSO_200M_050219_2,8713 HBL1_DMSO_200M_050219_2,8713,VQPWCEVLWWF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8714 47.351 800.0 125960.0 25 0 29425.0 + 34452 SLYKMQTEQI 10 91 620.8185210059057 1239.6224890786114 2 620.8204833865166 MULTI CID FTMS 0 0 0 8698 108004.234375 1.0 0 0.0 16 Unmodified _SLYKMQTEQI_ REV__ENSG00000170537|ENST00000304381|TMC7;REV__ENST00000568469.5_1_16:18995385-19051723:+|nuORF 13.042465956692816 0.6287021003332052 4 {[VA]|[{I|L}G]}AE 4 -1 12.395 0.0 0.0 0.99989 0.0 0.0 0.0 866.4128692878488 866.4128692878488 1.798938535444723 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 {[VA]|[{I|L}G]}AE 0.99989 - 182 1 1.733 79881.1 0.6200000047683716 4166 4546 8698 HBL1_DMSO_200M_050219_2,8714 HBL1_DMSO_200M_050219_2,8714,SLYKMQTEQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8715 47.366 800.0 66474.0 25 0 4874.2 + -1 EEHCMEEDDC 10 85 656.6937744021416 0 656.6937744021416 PEAK CID FTMS 0 0 0 -1 0 17 Carbamidomethyl (C),Oxidation (M) _EEHC(Carbamidomethyl (C))M(Oxidation (M))EEDDC_ REV__ENSG00000186462|ENST00000373517|NAP1L2;REV__nc|ENSG00000186462|Q9ULW6-2|NAP1L2 0.4007161486938917 0.3961065659209837 4 {I|L} 1 -1 6.9897 0.0 0.0 0.53341 0.0 0.0 85.8153607593268 1108.448990709486 1194.2643514688127 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.53341 - 5 + 1 1.733 42899.2 0.5899999737739563 4167 4546 8698 HBL1_DMSO_200M_050219_2,8715 HBL1_DMSO_200M_050219_2,8715,EEHCMEEDDC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8717 47.371 42.0 1154300.0 25 0 238700.0 + 6375 DVYESSVKV 9 69 513.2609178654473 1024.5072827976944 2 513.2613403201103 MULTI CID FTMS 0 0 0 8716 1198075.25 0.5108139295922614 1 -0.0947227478027343 1 Unmodified _DVYESSVKV_ ENSG00000042429|ENST00000251871|MED17 34.40172386719151 0.1061884637610825 4 [DV]YE 4 5 53.188 0.0 0.0 5.1915 0.0 0.0 0.0 515.2842920977612 515.2842920977612 39.65559355296094 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.8494850021680094 0.0 + [DV]YE 5.1915 + + 66 + 1 1.743 40720.6 1.0 4168 4547 8716 HBL1_DMSO_200M_050219_2,8717 HBL1_DMSO_200M_050219_2,8717,DVYESSVKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8718 47.372 68.0 814010.0 25 0 111390.0 + 34894 SQIDPSSIERA 11 65 601.8039149111047 1201.5932768890093 2 601.8044921755791 MULTI CID FTMS 0 0 0 8716 641704.3125 0.093571894979997 3 -0.2636375427246094 2 Unmodified _SQIDPSSIERA_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 25.997395711884035 0.4817758527606796 4 [{I|L}V]Q{M(Oxidation (M))|F}{[CA]|SS}PD{I|L} 9 8 46.985 0.0 0.0 3.9102 0.0 0.0 0.0 212.0688410490109 212.0688410490109 30.5449934725749 0.0 0.0 0.0 0 1.2614393726401687 1.5228787452803376 0.0 0.4247425010840047 [{I|L}V]Q{M(Oxidation (M))|F}{[CA]|SS}PD{I|L} 3.9102 - 213 1 1.743 45381.6 1.0 4169 4547 8716 HBL1_DMSO_200M_050219_2,8718 HBL1_DMSO_200M_050219_2,8718,SQIDPSSIERA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8719 47.373 44.0 477880.0 25 0 55882.0 -1 LQFCENCCQ 9 42 629.7346177843814 1257.454682635563 2 629.7353393435478 MULTI CID FTMS 0 0 0 8716 1228847.625 0.6418416427594752 1 -0.0947227478027343 3 3 Carbamidomethyl (C) _LQFC(Carbamidomethyl (C))ENC(Carbamidomethyl (C))C(Carbamidomethyl (C))Q_ ENSG00000198945|ENST00000361794|L3MBTL3;nc|ENSG00000198945|Q96JM7-2|L3MBTL3 4.75600775471527 0.7486543447549536 4 {[QS]|[NT]}A 3 -1 11.963 0.0 0.0 0.95134 0.0 0.0 0.0 968.3042059112064 968.3042059112064 11.249387366083 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {[QS]|[NT]}A 0.95134 - 16 1 1.743 23804.5 1.0 4170 4547 8716 HBL1_DMSO_200M_050219_2,8719 HBL1_DMSO_200M_050219_2,8719,LQFCENCCQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8720 47.375 54.0 888570.0 25 0 142530.0 + + 34059 TVLERVEGA 9 80 487.26883232290913 972.5231117126184 2 487.2697326540947 MULTI CID FTMS 0 0 0 8716 956225.6875 1.0 0 0.0 4 Unmodified _SLLEERQV_ ENST00000495205.1_1_1:201104793-201114281:-|nuORF;ENSG00000116857|ENST00000367330|TMEM9 20.453626601364224 0.6087503291685402 4 {[TV]|[{I|L}S]}{I|L}[DG]TWE 8 -1 43.193 0.0 0.0 4.4413 0.0 0.0 0.0 68.05130182437733 68.05130182437733 22.902215944156907 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}{I|L}[DG]TWE 4.4413 - 148 + 1 1.743 42083.6 1.0 4171 4547 8716 HBL1_DMSO_200M_050219_2,8720 HBL1_DMSO_200M_050219_2,8720,SLLEERQV False False TVLERVEGA 47.374847 487.269732654095 9168273.0 8716.0 ENST00000495205.1_1_1:201104793-201114281:-|nuORF;;ENSG00000116857|ENST00000367330|TMEM9 1.640296200911204 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8721 47.376 41.0 1502000.0 25 0 185320.0 -1 LGGVGMMCSLS 11 91 543.7359241794802 1085.4572954257603 2 543.7338744997978 MULTI CID FTMS 0 0 0 8716 848277.5625 0.7829260408130491 -1 0.1237602233886718 5 2 Oxidation (M) _LGGVGM(Oxidation (M))M(Oxidation (M))CSLS_ ENSG00000166532|ENST00000535829|RIMKLB;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;nc|ENSG00000166532|Q9ULI2-2|RIMKLB 10.073929032068715 0.8255972128077141 4 {[VA]|[{I|L}G]}ADD{M(Oxidation (M))|F} 6 -1 40.635 0.0 0.0 3.7436 0.0 0.0 0.0 464.1659959382555 464.1659959382555 15.228787452803374 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}ADD{M(Oxidation (M))|F} 3.7436 - 118 + 1 1.743 54565.4 1.0 4172 4547 8716 HBL1_DMSO_200M_050219_2,8721 HBL1_DMSO_200M_050219_2,8721,LGGVGMMCSLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8722 47.378 70.0 886720.0 25 0 92470.0 -1 QNLFCCLYRSW 11 63 745.3384553507148 1488.6623577682294 2 745.3394042849541 MULTI CID FTMS 0 0 0 8716 764549.3125 0.7091910965849944 1 -0.0947227478027343 6 Carbamidomethyl (C) _QNLFC(Carbamidomethyl (C))CLYRSW_ ENSG00000103043|ENST00000261776|VAC14;ENST00000564685.5_1_16:70731013-70778503:-|nuORF;nc|ENSG00000103043|Q08AM6-2|VAC14 3.2813086475875832 0.8596665074481906 4 SEAQQNA{M(Oxidation (M))|F}Y 9 -1 61.437 0.0 0.0 4.127 0.0 0.0 432.2036305158219 0.0 432.2036305158219 0.0 48.67238588792619 0.0 0.0 0 0.6822333069283655 0.0 0.0 0.8494850021680094 SEAQQNA{M(Oxidation (M))|F}Y 4.127 - 300 1 1.743 49770.3 1.0 4173 4547 8716 HBL1_DMSO_200M_050219_2,8722 HBL1_DMSO_200M_050219_2,8722,QNLFCCLYRSW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8723 47.38 107.0 501540.0 25 0 48218.0 -1 VPLDGRPMNI 10 62 564.2970550918537 1126.5795572505074 2 564.2979003787041 MULTI CID FTMS 0 0 0 8716 661499.75 0.9996041815279612 1 -0.0947227478027343 7 Oxidation (M) _VPLDGRPM(Oxidation (M))NI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 32.78568957990786 0.2337485590374503 4 VP{I|L}D 4 -1 62.836 0.0 0.0 5.5776 0.0 0.0 0.0 699.3259981744749 699.3259981744749 21.92085350219358 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.7614393726401688 0.0 VP{I|L}D 5.5776 + + 108 + 1 1.743 49316.4 1.0 4174 4547 8716 HBL1_DMSO_200M_050219_2,8723 HBL1_DMSO_200M_050219_2,8723,VPLDGRPMNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8724 47.382 91.0 800290.0 25 0 99616.0 + 2084 APPPPPPQL 9 104 457.2606688128342 912.5067846924684 2 457.2608825564384 MULTI CID FTMS 0 0 0 8716 634583.875 0.7410446136454321 1 -0.0947227478027343 8 Unmodified _APPPPPPQL_ REV__ENSG00000167476|ENST00000300961|JSRP1;REV__ENSG00000185950|ENST00000375856|IRS2 86.12129899796855 0.0160336270647063 4 [PA]PPPPPQ{I|L} 9 -1 + 68.311 0.0 0.0 7.4861 7.4861 94.544 0.0 0.0 0.0 21.760912590556813 4.8063583589952685 4.8063583589952685 21.760912590556813 0 1.8979400086720373 2.0 0.0 0.0 [PA]PPPPPQ{I|L};{[HG]|PP}APPPPQ{I|L};[PA][YK]PPQ{I|L};[PA]PP[YK]Q{I|L};[PA]P[YK]PQ{I|L};{[HG]|PP}PAPPPQ{I|L};[YK]APPPQ{I|L};[Q{I|L}]{M(Oxidation (M))|F}APPQ{I|L};{[HG]|PP}PPAPPQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PPA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 7.4861;5.1013;4.6431;4.1685;4.1203;4.113;3.9259;2.8875;2.8815;2.8141 +;-;-;-;-;-;-;-;-;- + 466 1 1.743 59697.3 1.0 4175 4547 8716 HBL1_DMSO_200M_050219_2,8724 HBL1_DMSO_200M_050219_2,8724,APPPPPPQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8725 47.384 70.0 1470800.0 25 0 136160.0 + 24281 MAREVINRI 9 100 367.878241522863 1100.612895168789 3 367.8781921267509 MULTI CID FTMS 0 0 0 8716 627702.5625 0.6237647744641065 -1 0.1237602233886718 9 Unmodified _MAREVINRI_ ENSG00000196305|ENST00000443024|IARS1 31.635753872319068 0.1286659907112723 4 MAREV{I|L}{I|L}NR 9 2 + 72.394 0.0 0.0 6.5776 6.5776 88.501 0.0 0.0 0.0 58.41483306379172 10.457574905606757 10.457574905606757 9.208187539523756 0 0.805462187404089 0.958607314841775 0.0 1.024227503252014 MAREV{I|L}{I|L}NR;MAREV{I|L}{I|L}GGR;MAREV{I|L}N{I|L}R;MAREV{I|L}NR{I|L};MA{I|L}[RD]{I|L}{I|L}NR;M{I|L}A[RD]{I|L}{I|L}NR;MAREV{I|L}GG{I|L}R;MAREV{I|L}GGR{I|L};MA{I|L}[RD]{I|L}{I|L}GGR;M{I|L}A[RD]{I|L}{I|L}GGR 6.5776;5.741;5.5762;5.3554;5.3486;5.257;4.7396;4.5188;4.512;4.4204 -;-;-;+;-;-;-;-;-;- + 521 + 1 1.743 89133.1 1.0 4176 4547 8716 HBL1_DMSO_200M_050219_2,8725 HBL1_DMSO_200M_050219_2,8725,MAREVINRI False True MAREVINRI 47.383637 367.878192126751 6673948.5 8716.0 ENSG00000196305|ENST00000443024|IARS1 4.639973004659017 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8726 47.387 196.0 580890.0 25 0 108710.0 -1 0 79 966.4323678807548 1930.8501828283097 2 966.4341918826104 MULTI CID FTMS 0 0 0 8716 451209.8125 0.3154603588318502 7 -0.639923095703125 10 4 {I|L}TNQP{[QN]|[E{I|L}]|[KN]} 7 -1 19.83 0.0 0.0 1.027 0.0 0.0 1117.4279549003784 0.0 1117.4279549003784 0.0 -0.6337413793712088 -0.6337413793712088 0.0 0 0.0 0.0 0.2742275032520141 0.2887254899964357 {I|L}TNQP{[QN]|[E{I|L}]|[KN]} 1.027 - 291 + 1 1.743 78881.6 1.0 4177 4547 8716 HBL1_DMSO_200M_050219_2,8726 HBL1_DMSO_200M_050219_2,8726, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8727 47.391 159.0 449840.0 25 0 61932.0 + 3779 DAHNVQAVI 9 96 483.75369134185513 965.4928297505104 2 483.7540161013603 MULTI CID FTMS 0 0 0 8716 359760.59375 0.3326093975913918 -2 0.2227935791015625 11 Unmodified _DAHNVQAVI_ ENSG00000258890|ENST00000556440|CEP95;ENST00000580188.1_2_17:62503129-62515542:+|nuORF 32.78568957990786 0.1150597335874693 4 [HA]DNVAGAV{I|L} 10 4 + 51.107 0.0 0.0 5.2934 5.2934 69.955 0.0 0.0 0.0 0.5115252244738144 10.452490459521968 0.5115252244738144 0.5115252244738144 0 0.8182503180159344 0.0 0.2302046884880938 0.4247425010840047 [HA]DNVAGAV{I|L};{[DA]|[EG]}HNVAGAV{I|L};[HA]DNVQAV{I|L};[HA]DNVAQV{I|L};{[DA]|[EG]}HNVAQV{I|L};{[DA]|[EG]}HNVQAV{I|L};[HA]DGGVAGAV{I|L};{[DA]|[EG]}HGGVAGAV{I|L};[HA]DGGVQAV{I|L};[HA]DGGVAQV{I|L} 5.2934;5.2404;4.6168;4.6168;4.5638;4.5638;3.9042;3.8513;3.6631;3.6631 -;-;-;-;-;+;-;-;-;- + 274 1 1.743 60659.5 1.0 4178 4547 8716 HBL1_DMSO_200M_050219_2,8727 HBL1_DMSO_200M_050219_2,8727,DAHNVQAVI True True DAHNVQAVI 47.390564 483.75401610136 16458018.53125 8716.0 ENSG00000258890|ENST00000556440|CEP95;;ENST00000580188.1_2_17:62503129-62515542:+|nuORF 7.181076526641846 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8728 47.404 771.0 311550.0 25 0 27043.0 + 16543 KAWEGLHENSV 11 174 635.3145588039392 1268.6145646746784 2 635.3154174685478 MULTI CID FTMS 0 0 0 8716 302455.96875 0.4221952340479882 -1 0.1237602233886718 12 Unmodified _KAWEGLHENSV_ chr12:8604892-8605215|31|16.84|0.02|9.9|-|ENST00000537228|AICDA,AICDA;ENSG00000111732|ENST00000229335|AICDA;ENST00000545576.1_1_12:8756882-8757648:-|nuORF;nc|ENSG00000111732|Q9GZX7-2|AICDA 193.036588131458 1.5948192448450454e-27 4 KAWE{[VA]|[{I|L}G]}HENSV 11 0 + 118.78 0.0 0.0 9.3633 9.3633 81.659 0.0 0.0 0.0 0.9606969964485756 0.9606969964485756 0.9606969964485756 0.9606969964485756 0 4.424742501084005 0.4089353929735008 2.5471062485323515 1.3609243748081783 + + KAWE{[VA]|[{I|L}G]}HENSV;[KA]WE{[VA]|[{I|L}G]}HENSV;[KA]WE{[VA]|[{I|L}G]}HEGGSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KE{[VA]|[{I|L}G]}HENSV;[NS]NAK{[VA]|[{I|L}G]}HENSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KE{[VA]|[{I|L}G]}HEGGSV;KAWE{[VA]|[{I|L}G]}HEGGSV;KA{M(Oxidation (M))|F}[PA]{[VA]|[{I|L}G]}HENSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K[W{I|L}]HENSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EK{[VA]|[{I|L}G]}HENSV 9.3633;9.2876;8.568;8.5328;7.8776;7.8132;7.571;7.4859;7.3605;7.3282 +;+;-;-;-;-;-;-;-;- + 87559 + 1 1.743 185513.5 1.0 4179 4547 8716 HBL1_DMSO_200M_050219_2,8728 HBL1_DMSO_200M_050219_2,8728,KAWEGLHENSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8729 47.407 129.0 591460.0 25 0 94078.0 + 3363 AYPNNYETM 9 87 551.7286991502806 1101.442845367361 2 551.7294799685478 MULTI CID FTMS 0 0 0 8716 284197.5625 0.6358150893699662 1 -0.0947227478027343 13 Unmodified _AYPNNYETM_ ENSG00000198730|ENST00000361367|CTR9 18.13498045792455 0.3457906370836843 4 [NP]NYE[MT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 9 4 + 24.625 0.0 0.0 2.2357 2.2357 74.347 0.0 0.0 0.0 4.762036441594194 5.117027636818467 4.762036441594194 9.208187539523752 0 0.0 0.0 0.0 0.3252574989159953 [NP]NYE[MT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[NP]GGYE[MT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[{M(Oxidation (M))|F}C]|[YS]}[HT]E[MT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[YN][NP]E[MT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[MT]QQE[MT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 2.2357;1.3997;0.93337;0.60525;0.47258 -;-;-;-;- 123 1 1.743 65940.8 1.0 4180 4547 8716 HBL1_DMSO_200M_050219_2,8729 HBL1_DMSO_200M_050219_2,8729,AYPNNYETM False True AYPNNYETM 47.406559 551.729479968548 5275241.0 8716.0 ENSG00000198730|ENST00000361367|CTR9 4.80287116765976 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8730 47.411 222.0 391820.0 25 0 47333.0 44764 YPLNLPSV 8 99 451.7527688641812 901.4909847951624 2 451.7532226443291 MULTI CID FTMS 0 0 0 8716 261412.828125 0.4762871614204467 -7 0.6985397338867188 14 Unmodified _YPLNLPSV_ ENSG00000158528|ENST00000433360|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A;nc|ENSG00000158528|Q9ULJ8|PPP1R9A 21.74664581756881 0.5868176546531598 4 YP{I|L} 3 5 46.95 0.0 0.0 5.2081 0.0 0.0 0.0 525.2673433893186 525.2673433893186 31.989700043360187 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YP{I|L} 5.2081 + + 181 + 1 1.743 72261.9 1.0 4181 4547 8716 HBL1_DMSO_200M_050219_2,8730 HBL1_DMSO_200M_050219_2,8730,YPLNLPSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8731 47.414 143.0 513410.0 25 0 50060.0 + 5692 DPIARPSEI 9 110 499.2700292894194 996.5255056456388 2 499.2706481814384 MULTI CID FTMS 0 0 0 8716 262043.3125 0.5066241456284336 -1 0.1237602233886718 15 Unmodified _DPIARPSEI_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B 41.95555342248728 0.0647214845423414 4 DP{I|L}ARH 6 4 75.706 0.0 0.0 7.597 0.0 0.0 0.0 304.1312655084594 304.1312655084594 46.63348358030191 0.0 0.0 0.0 0 1.305462187404089 2.0 0.0 0.0 DP{I|L}ARH 7.597 - 837 + 1 1.743 57364.9 1.0 4182 4547 8716 HBL1_DMSO_200M_050219_2,8731 HBL1_DMSO_200M_050219_2,8731,DPIARPSEI True True DPIARPSEI 47.413603 499.270648181438 8607573.0 8716.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 5.379049460093181 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8732 47.418 213.0 461160.0 25 0 57667.0 + 4907 DGKSLVSV 8 110 402.7274376081221 803.4403222830442 2 402.7268554568291 MULTI CID FTMS 0 0 0 8716 231768.9375 0.0899802117943645 -3 0.2945632934570312 16 Unmodified _DGKSLVSV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P 56.17704186161178 0.1143274477948619 4 [VS]NS{I|L}VSV 8 3 + 80.17 0.0 0.0 9.9784 9.9784 89.275 0.0 0.0 0.0 14.648867983026506 64.93623790491817 14.648867983026506 5.255762612236907 0 0.9247425010840048 1.3979400086720375 1.579689690656103 0.0 [VS]NS{I|L}VSV;[VS]NVTVSV;[VS]GGS{I|L}VSV;[VS]NSV{I|L}SV;[VS]GGVTVSV;[VS]NVS{I|L}SV;[KG]DS{I|L}VSV;[DG]KS{I|L}VSV;[VS]GGSV{I|L}SV;[KG]DVTVSV 9.9784;9.3242;8.8255;8.5797;8.1714;7.9256;7.8637;7.546;7.4269;7.2096 -;-;-;-;-;-;-;+;-;- + 509 1 1.743 80285.7 1.0 4183 4547 8716 HBL1_DMSO_200M_050219_2,8732 HBL1_DMSO_200M_050219_2,8732,DGKSLVSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8733 47.424 254.0 226730.0 25 0 16414.0 + 16545 KAWEGLHENSV 11 103 423.8785715204575 1268.6138851615724 3 423.8784973025322 MULTI CID FTMS 0 0 0 8716 177602.921875 0.5067059058904128 -1 0.1237602233886718 17 Unmodified _KAWEGLHENSV_ chr12:8604892-8605215|31|16.84|0.02|9.9|-|ENST00000537228|AICDA,AICDA;ENSG00000111732|ENST00000229335|AICDA;ENST00000545576.1_1_12:8756882-8757648:-|nuORF;nc|ENSG00000111732|Q9GZX7-2|AICDA 21.66607237732072 0.5834766605609453 4 [KA][WE]G{I|L}HENSV 11 0 + 48.944 0.0 0.0 3.8581 3.8581 64.863 0.0 0.0 0.0 0.5400081350839869 33.45957083720844 0.5400081350839869 0.7391865180370516 0 0.3494850021680094 0.0 0.805462187404089 0.2614393726401688 + + [KA][WE]G{I|L}HENSV;[WE][KQ]{I|L}HENSV;[WE][KA]G{I|L}HENSV;{[QD]|[EN]|[WG]|[KD]|[RS]}[RD]G{I|L}HENSV;[H{I|L}][YT]G{I|L}HENSV;{[YC]|[HE]}N[KG]QKENSV;[KA][WE]G{I|L}HEGGSV;[WE][KQ]{I|L}HEGGSV;[WE][KA]G{I|L}HEGGSV;[H{I|L}][WE]QKENSV 3.8581;3.7998;3.652;3.3619;3.2759;3.2438;3.1385;3.0774;2.9324;2.7254 +;-;-;-;-;-;-;-;-;- + 672 1 1.743 54668.3 1.0 4184 4547 8716 HBL1_DMSO_200M_050219_2,8733 HBL1_DMSO_200M_050219_2,8733,KAWEGLHENSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8734 47.437 800.0 59532.0 25 0 3617.0 -1 YMWALAFFMAF 11 100 707.3228160807513 1412.6310792283025 2 707.3232299685478 MULTI CID FTMS 0 0 0 8716 128488.4375 0.3392464783096216 2 -0.1987571716308593 18 Oxidation (M) _YM(Oxidation (M))WALAFFMAF_ ENSG00000111602|ENST00000553532|TIMELESS;nc|ENSG00000111602|Q9UNS1-2|TIMELESS 6.723162845929126 0.8434276150410019 4 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F} 12 -1 + 44.373 0.0 0.0 3.1412 3.1412 74.095 0.0 0.0 0.0 3.728114743528167 3.728114743528167 3.728114743528167 9.098233696509112 0 0.4826446478103828 0.0 0.3054621874040891 1.045114016114533 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{NN|[MP]|[D{I|L}]|[EV]}QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{NN|[MP]|[D{I|L}]|[EV]}QNA{M(Oxidation (M))|F};[HV]NQQA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HS]A{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{NN|[MP]|[D{I|L}]|[EV]}QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F};{[HG]|PP}{[YC]|[HE]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F} 3.1412;2.4971;2.4971;2.4971;2.0686;2.0278;1.8011;1.7666;1.7421;1.4033 -;-;-;-;-;-;-;-;-;- 393 1 1.743 37874.0 0.6200000047683716 4185 4547 8716 HBL1_DMSO_200M_050219_2,8734 HBL1_DMSO_200M_050219_2,8734,YMWALAFFMAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8735 47.451 800.0 95984.0 25 0 5435.6 -1 0 108 626.6394953558392 1876.8966566677177 3 626.9752685427666 MULTI CID FTMS 0 0 0 8716 117140.203125 1.0 0 0.0 19 4 MPDQ 4 -1 48.721 0.0 0.0 2.5958 0.0 0.0 1387.7085595991614 0.0 1387.7085595991614 0.0 21.030520608807407 0.0 0.0 0 0.5 0.0 0.7134679910804405 1.1549471895720984 MPDQ 2.5958 - 304 + 1 1.743 59811.1 0.6499999761581421 4186 4547 8716 HBL1_DMSO_200M_050219_2,8735 HBL1_DMSO_200M_050219_2,8735, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8736 47.46 525.0 217320.0 25 0 24647.0 + -1 TYQAMVHEL 9 141 554.2610548520029 1106.5075567708056 2 554.2645141482353 MULTI CID FTMS 0 0 0 8716 127021.2421875 1.0 0 0.0 20 Oxidation (M) _TYQAM(Oxidation (M))VHEL_ ENSG00000136631|ENST00000644510|VPS45;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;nc|ENSG00000136631|Q9NRW7-2|VPS45 30.63653989081413 0.1413794767160703 4 [YT]QA{M(Oxidation (M))|F}VVY 8 -1 58.097 0.0 0.0 5.2505 0.0 0.0 0.0 132.04567896060783 132.04567896060783 30.690906313791324 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.4247425010840047 [YT]QA{M(Oxidation (M))|F}VVY 5.2505 - 1619 + 1 1.743 91075.4 1.0 4187 4547 8716 HBL1_DMSO_200M_050219_2,8736 HBL1_DMSO_200M_050219_2,8736,TYQAMVHEL False False TYQAMVHEL 47.460424 554.264514148235 1009180.5 8716.0 ENSG00000136631|ENST00000644510|VPS45;;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;;nc|ENSG00000136631|Q9NRW7-2|VPS45 5.579429467519124 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8738 47.465 15.0 4126100.0 25 0 633340.0 + 43113 VYPDGIRHI 9 81 357.19790174895763 1068.571875847073 3 357.1978637576103 MULTI CID FTMS 0 0 0 8737 2938253.5 0.5954114717461813 1 -0.104034423828125 1 Unmodified _VYPDGIRHI_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 46.020951573049366 0.0490941689151868 4 [YV]PD{I|L}GRH{I|L} 9 2 + 68.527 0.0 0.0 6.413 6.413 76.851 0.0 0.0 0.0 49.34623773781176 9.45477404615822 9.45477404615822 1.7609125905568137 0 0.3494850021680094 2.0 0.4247425010840047 0.3494850021680094 [YV]PD{I|L}GRH{I|L};[YV]PDG{I|L}RH{I|L};[YV]P{I|L}DGRH{I|L};[YV]{I|L}PDGRH{I|L};[YV]{I|L}YH{I|L}[YV];[DP][R{I|L}]GH{I|L}[YV];[DP]G[R{I|L}]H{I|L}[YV] 6.413;6.2482;6.1313;5.8788;2.9044;2.6547;1.7893 -;+;-;-;-;-;- + 168 + 1 1.749 64512.2 1.0 4188 4548 8737 HBL1_DMSO_200M_050219_2,8738 HBL1_DMSO_200M_050219_2,8738,VYPDGIRHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8739 47.466 34.0 1660200.0 25 0 216630.0 + 43115 VYPDGIRHI 9 53 535.2931034540663 1068.5716539749326 2 535.2936889529228 MULTI CID FTMS 0 0 0 8737 1544464.5 0.6774438790420166 1 -0.104034423828125 2 Unmodified _VYPDGIRHI_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 22.736283301280096 0.2418982879461534 4 VYPD{[VA]|[{I|L}G]}RH{I|L} 9 0 + 57.722 0.0 0.0 5.4018 5.4018 86.178 0.0 0.0 0.0 46.2101498947667 4.5469288353417525 4.5469288353417525 15.740312677277188 0 0.4247425010840047 2.0 0.0 0.0 + + VYPD{[VA]|[{I|L}G]}RH{I|L};VYP{[RE]|[WV]}[VG]H{I|L};[DP][DP][R{I|L}]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.4018;3.9288;2.0998 +;-;- + 77 + 1 1.749 50795.7 1.0 4189 4548 8737 HBL1_DMSO_200M_050219_2,8739 HBL1_DMSO_200M_050219_2,8739,VYPDGIRHI False True VYPDGIRHI 47.466213 535.293688952923 106840280.0 8737.0 ENST00000568291.2_1_16:70588380-70590279:+|nuORF;;ENSG00000189091|ENST00000302516|SF3B3 6.1350429852803545 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8740 47.467 33.0 1428600.0 25 0 150980.0 + 2723 ATGENLPRV 9 70 478.76156667719874 955.5085804211976 2 478.7618286013603 MULTI CID FTMS 0 0 0 8737 1973844.625 1.0 0 0.0 3 Unmodified _ATGENLPRV_ ENSG00000166181|ENST00000531273|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;nc|ENSG00000166181|Q9BZZ5-6|API5 34.40172386719151 0.1061884637610825 4 [TA]GEN{I|L}V[RP] 9 2 + 70.379 0.0 0.0 7.3656 7.3656 85.502 0.0 0.0 0.0 27.147642715192504 4.941545940184426 4.941545940184426 4.941545940184426 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [TA]GEN{I|L}V[RP];[TA]GEN{I|L}PRV;[TA]GEGG{I|L}V[RP];[TA]GEGG{I|L}PRV 7.3656;6.8485;6.4019;5.8848 -;+;-;- + 101 + 1 1.749 44002.0 1.0 4190 4548 8737 HBL1_DMSO_200M_050219_2,8740 HBL1_DMSO_200M_050219_2,8740,ATGENLPRV True True ATGENLPRV 47.467392 478.76182860136 57649292.0 8737.0 nc|ENSG00000166181|Q9BZZ5-3|API5;;nc|ENSG00000166181|Q9BZZ5-6|API5;;nc|ENSG00000166181|Q9BZZ5-2|API5;;nc|ENSG00000166181|Q9BZZ5-5|API5;;nc|ENSG00000166181|Q9BZZ5-1|API5;;ENSG00000166181|ENST00000531273|API5 6.195895671844482 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8741 47.469 36.0 1614400.0 25 0 275820.0 + 5763 DPPDGIKV 8 68 420.7265342156436 839.4385154980872 2 420.7267333865166 MULTI CID FTMS 0 0 0 8737 1741185.625 1.0 0 0.0 4 Unmodified _DPPDGIKV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 30.63653989081413 0.3996269429323407 4 DPPD{[VA]|[{I|L}G]}KV 8 0 + 64.474 0.0 0.0 7.6806 7.6806 95.389 0.0 0.0 0.0 41.42790030352131 12.184290373512034 12.184290373512034 25.083107092853822 0 0.3807196863200844 2.0 0.0 0.2742275032520141 + + DPPD{[VA]|[{I|L}G]}KV;DPPK{[CA]|SS}[{I|L}P] 7.6806;4.6925 +;- + 124 + 1 1.749 55022.0 1.0 4191 4548 8737 HBL1_DMSO_200M_050219_2,8741 HBL1_DMSO_200M_050219_2,8741,DPPDGIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8742 47.47 40.0 1461400.0 25 0 296720.0 + 5851 DPVPEVRTV 9 63 506.277596089022 1010.540639244844 2 506.2776061892509 MULTI CID FTMS 0 0 0 8737 1380826.625 0.9135766110901186 1 -0.104034423828125 5 Unmodified _DPVPEVRTV_ ENSG00000089154|ENST00000300648|GCN1 26.268140514670165 0.1969607489560049 4 [DP]VPE 5 4 50.005 0.0 0.0 4.9483 0.0 0.0 0.0 470.2736687485015 470.2736687485015 43.042359562158126 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.3807196863200844 0.0 + [DP]VPE 4.9483 + + 41 + 1 1.749 52646.4 1.0 4192 4548 8737 HBL1_DMSO_200M_050219_2,8742 HBL1_DMSO_200M_050219_2,8742,DPVPEVRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8743 47.472 104.0 380360.0 25 0 40766.0 -1 LGCEGVEQAVA 11 66 587.7722182638554 1173.5298835945107 2 587.7729980349541 MULTI CID FTMS 0 0 0 8737 580574.0625 0.1834965114035407 -3 0.3175163269042969 6 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))LGC(Carbamidomethyl (C))EGVEQAVA_ ENST00000589334.5_1_17:42088561-42088705:-|nuORF 20.41453444215458 0.6105011870913812 4 {[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YEQAVA 10 -1 + 31.814 0.0 0.0 2.711 2.711 76.592 0.0 0.0 0.0 0.0122623118827647 11.100840614449794 0.0122623118827647 12.659389507179345 0 0.718765315847925 0.0 0.6237125054200234 0.3494850021680094 {[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YEQAVA;{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YE[AG]AVA;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QE{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y[QA]EVA;[C(Carbamidomethyl (C))K]VE{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}T{I|L}D[KG]{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}T{I|L}[QA]T{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}T[QA]{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y[QA]T[TP];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[AG]E{I|L}T{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F} 2.711;1.6322;1.5798;1.4372;1.132;1.0127;0.86264;0.60612;0.56818;0.49736 -;-;-;-;-;-;-;-;-;- 129 1 1.749 38672.6 1.0 4193 4548 8737 HBL1_DMSO_200M_050219_2,8743 HBL1_DMSO_200M_050219_2,8743,LGCEGVEQAVA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8744 47.475 134.0 662620.0 25 0 134360.0 + 24282 MAREVINRI 9 90 551.3136536895424 1100.6127544458848 2 551.3141967654228 MULTI CID FTMS 0 0 0 8737 375539.90625 1.0 0 0.0 7 Unmodified _MAREVINRI_ ENSG00000196305|ENST00000443024|IARS1 14.95716135407024 0.4318104563536712 4 [NP]NYE 5 8 20.445 0.0 0.0 1.8576 0.0 0.0 0.0 480.3448460809036 480.3448460809036 0.9813624419633272 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 [NP]NYE 1.8576 - 68 1 1.749 72003.6 1.0 4194 4548 8737 HBL1_DMSO_200M_050219_2,8744 HBL1_DMSO_200M_050219_2,8744,MAREVINRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8745 47.48 304.0 369140.0 25 0 44540.0 + 45203 YQVAAAESHPL 11 105 593.2983678373796 1184.582182741559 2 593.2989379763603 MULTI CID FTMS 0 0 0 8737 314730.875 0.360101709886265 -2 0.2184829711914062 8 Unmodified _YQVAAAESHPL_ ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 66.45667989310934 0.0429411148994294 4 [YQ]VAAAESHP{I|L} 11 0 + 64.433 0.0 0.0 5.4393 5.4393 86.594 0.0 0.0 0.0 27.32225065727893 7.934756046404772 7.934756046404772 17.275909338131754 0 1.2302046884880935 1.0457574905606752 0.2302046884880938 0.0 + + [YQ]VAAAESHP{I|L};[YQ]V[YV]AAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]VAA[YV]VC(Carbamidomethyl (C)){I|L};[YQ]{M(Oxidation (M))|F}[{I|L}T]AAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]VA[YV]AV{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]V{[NV]|[RG]}ESHP{I|L};[YQ]VAA[{I|L}T]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GV[YV]AAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}[{I|L}T]AAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]VAA[YV]VGC{I|L} 5.4393;3.9809;3.6401;3.5997;3.5518;3.5517;3.4905;3.3812;3.2315;3.2277 +;-;-;-;-;-;-;-;-;- + 881 + 1 1.749 88715.4 1.0 4195 4548 8737 HBL1_DMSO_200M_050219_2,8745 HBL1_DMSO_200M_050219_2,8745,YQVAAAESHPL True True YQVAAAESHPL 47.48028 593.29893797636 14244494.0 8737.0 ENST00000416120.1_1_6:64259201-64259360:-|nuORF;;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 7.128268559773763 2.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8746 47.485 229.0 480060.0 25 0 54165.0 + 15439 IPPSISRV 8 98 434.76587112779487 867.5171893223898 2 434.7661926150322 MULTI CID FTMS 0 0 0 8737 275873.625 0.4625350020444275 8 -0.758392333984375 9 Unmodified _IPPSISRV_ ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6-3|BRWD1;nc|ENSG00000185658|Q9NSI6-4|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1 22.736283301280096 0.5659792798204337 4 {I|L}PPS{I|L} 5 3 50.974 0.0 0.0 5.8759 0.0 0.0 0.0 357.1877535455688 357.1877535455688 38.20997473287644 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}PPS{I|L} 5.8759 + + 68 + 1 1.749 90747.4 1.0 4196 4548 8737 HBL1_DMSO_200M_050219_2,8746 HBL1_DMSO_200M_050219_2,8746,IPPSISRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8747 47.489 223.0 550460.0 25 0 58455.0 8468 ESVGKGAV 8 119 373.7056012714487 745.3966496096974 2 373.7056457400322 MULTI CID FTMS 0 0 0 8737 230715.59375 0.3539370874093224 -2 0.2184829711914062 10 Unmodified _ESVGKGAV_ ENSG00000161634|ENST00000293371|DCD 7.910154910731844 0.7763180056447161 4 ED{I|L}TR{I|L} 6 7 + 57.609 0.0 0.0 7.7286 7.7286 81.547 0.0 0.0 0.0 26.197887582883936 2.04119982655925 2.04119982655925 2.04119982655925 0 0.2215141619232908 1.0 0.4247425010840047 0.0 ED{I|L}TR{I|L};ED{I|L}T{I|L}R;ED{I|L}{I|L}TR;EDK[KQ]V;{[{M(Oxidation (M))|F}D]|MM}[VP]R{I|L};{[{M(Oxidation (M))|F}D]|MM}[VP]{I|L}R 7.7286;7.4548;6.6471;3.897;0.89288;0.61903 -;-;-;-;-;- 95 + 1 1.749 99344.8 1.0 4197 4548 8737 HBL1_DMSO_200M_050219_2,8747 HBL1_DMSO_200M_050219_2,8747,ESVGKGAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8748 47.503 800.0 155860.0 25 0 13621.0 + + -1 VYYTGNSGAEAAM 13 156 667.2898059700631 1332.565059006926 2 667.2924072146416 MULTI CID FTMS 0 0 0 8737 158673.921875 0.5859184862023313 -2 0.2184829711914062 11 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))LPLDNAEC(Carbamidomethyl (C))L_ ENSG00000111667|ENST00000229268|USP5;nc|ENSG00000111667|P45974-2|USP5;ENST00000537267.5_1_12:6966716-6975238:+|nuORF;ENST00000542371.1_1_12:6972998-6973244:+|nuORF 26.268140514670165 0.4754186812857754 4 [YV][CS]{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}AEAAM 12 -1 + 64.592 0.0 0.0 4.8472 4.8472 71.489 0.0 0.0 0.0 7.593176876429517 8.194765492042109 7.593176876429517 2.336900402617786 0 0.8182503180159344 2.0 1.579689690656103 1.7302046884880935 [YV][CS]{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}AEAAM;[YV][CS]QWGA{M(Oxidation (M))|F}AAM;[YV]YT[HC]Q{M(Oxidation (M))|F}AAM;[YV]{M(Oxidation (M))|F}D{[QN]|[E{I|L}]|[KN]}GA{M(Oxidation (M))|F}AAM;[YV]YT[WE]AEAAM;[YT]EE[YR]AEAAM;[YG]AEA{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]{I|L}M;[YV][CS]QWQ{M(Oxidation (M))|F}AAM;{[CP]|[EA]}QPT[WE]AEAAM;[YT]Y[DG]{[QN]|[E{I|L}]|[KN]}AEAAM 4.8472;4.6719;4.4882;4.4004;4.4003;4.2774;4.2323;4.1757;4.1695;4.1695 -;-;-;-;-;-;-;-;-;- 9027 1 1.749 91629.5 0.699999988079071 4198 4548 8737 HBL1_DMSO_200M_050219_2,8748 HBL1_DMSO_200M_050219_2,8748,ECLPLDNAECL False False VYYTGNSGAEAAM 47.502617 667.292407214642 2602182.0 8737.0 ENSG00000111667|ENST00000229268|USP5;;nc|ENSG00000111667|P45974-2|USP5;;ENST00000537267.5_1_12:6966716-6975238:+|nuORF;;ENST00000542371.1_1_12:6972998-6973244:+|nuORF 4.458827952543895 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8749 47.511 467.0 269200.0 25 0 31731.0 + 25124 MQDDNQVMV 9 146 540.2281223772479 1078.4416918212958 2 540.2282592654228 MULTI CID FTMS 0 0 0 8737 148352.078125 0.018171409555541 -5 0.5183448791503906 12 Unmodified _MQDDNQVMV_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 53.832793166522166 0.0319663582346103 4 {[QN]|[E{I|L}]|[KN]}DDMQVMV 9 2 + 58.557 0.0 0.0 5.4298 5.4298 72.633 0.0 0.0 0.0 1.6713641640275512 10.330145895351848 1.6713641640275512 1.6713641640275512 0 0.8182503180159344 0.0 0.8851518780601924 1.955112052208703 {[QN]|[E{I|L}]|[KN]}DDMQVMV;{[QD]|[EN]|[WG]|[KD]|[RS]}DNMQVMV;[DN]ENMQVMV;{[QD]|[EN]|[WG]|[KD]|[RS]}NDMQVMV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDNQVMV;[DN]QDMQVMV;{[QN]|[E{I|L}]|[KN]}DDM[AG]VMV;{[QD]|[EN]|[WG]|[KD]|[RS]}DNM[AG]VMV;{[QD]|[EN]|[WG]|[KD]|[RS]}DGGMQVMV;{[QD]|[EN]|[WG]|[KD]|[RS]}DMNQVMV 5.4298;5.2748;5.0556;4.9336;4.9018;4.7144;4.5759;4.421;4.421;4.37 -;-;-;-;+;-;-;-;-;- + 1244 1 1.749 108085.3 1.0 4199 4548 8737 HBL1_DMSO_200M_050219_2,8749 HBL1_DMSO_200M_050219_2,8749,MQDDNQVMV True True MQDDNQVMV 47.510901 540.2294 213684096.0 8737.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 7.759188652038574 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8750 47.52 509.0 255890.0 25 0 30341.0 + 12837 GVVDGPGVKV 10 146 463.76904867057857 0 463.7689391970634 PEAK CID FTMS 0 0 0 8737 129644.5390625 0.6328493507826783 -2 0.2184829711914062 13 Unmodified _GVVDGPGVKV_ ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2 39.94969957227396 0.1110137703778733 4 VDGPRK 6 5 27.298 0.0 0.0 2.9494 0.0 0.0 156.08978618235784 114.05650507144765 270.1462912538055 0.0 0.0 0.0 0.0 0 0.9731975075880328 0.0 0.4247425010840047 0.1803115997617927 VDGPRK 2.9494 - 207 + 1 1.749 101454.6 1.0 4200 4548 8737 HBL1_DMSO_200M_050219_2,8750 HBL1_DMSO_200M_050219_2,8750,GVVDGPGVKV True True GVVDGPGVKV 47.519861 463.768939197063 1632570.25 8737.0 nc|ENSG00000144554|Q9BXW9-1|FANCD2;;ENSG00000144554|ENST00000675286|FANCD2;;nc|ENSG00000144554|Q9BXW9-3|FANCD2 7.030274709065755 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8751 47.526 360.0 334870.0 25 0 42154.0 20168 LKRAVPGG 8 133 399.2520864459764 796.4896199587528 2 399.2524291872978 MULTI CID FTMS 0 0 0 8737 120099.546875 1.0 0 0.0 14 Unmodified _LKRAVPGG_ ENSG00000157637|ENST00000374759|SLC38A10 2.577480529830294 0.808687252328423 4 {I|L} 1 7 11.99 0.0 0.0 1.5053 0.0 0.0 665.3945709858997 0.0 665.3945709858997 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5053 + + 23 + 1 1.749 95675.7 1.0 4201 4548 8737 HBL1_DMSO_200M_050219_2,8751 HBL1_DMSO_200M_050219_2,8751,LKRAVPGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8752 47.537 568.0 188540.0 25 0 18984.0 + + -1 LPPPPHPSV 9 144 470.7661553460644 939.5177577589288 2 470.7662536501884 MULTI CID FTMS 0 0 0 8737 105931.1328125 0.2779224751377664 4 -0.3485641479492187 15 Carbamidomethyl (C) _LPPKC(Carbamidomethyl (C))VGAV_ ENSG00000141867|ENST00000679869|BRD4 38.15118350030904 0.0856056900103839 4 {I|L}PPYE 5 -1 58.18 0.0 0.0 6.1925 0.0 0.0 0.0 337.1894930475219 337.1894930475219 46.25971392584717 0.0 0.0 0.0 0 0.4820294981734686 2.0 0.2302046884880938 0.0 {I|L}PPYE 6.1925 - 672 + 1 1.749 83451.7 1.0 4202 4548 8737 HBL1_DMSO_200M_050219_2,8752 HBL1_DMSO_200M_050219_2,8752,LPPKCVGAV False False LPPPPHPSV 47.537455 470.766253650188 7050203.5 8737.0 ENSG00000141867|ENST00000679869|BRD4 6.1506937344868975 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8753 47.551 800.0 104810.0 25 0 27259.0 -1 0 39 1091.1046303632224 3270.292061689868 3 1091.442431628704 MULTI CID FTMS 0 0 0 8737 104537.0078125 0.5561868219248574 -2 0.2184829711914062 16 4 T{I|L} 2 -1 9.3804 0.0 0.0 0.28684 0.0 0.0 2498.9514244425227 554.1821383111936 3053.1335627537164 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T{I|L} 0.28684 - 35 + 1 1.749 79627.9 0.3600000143051147 4203 4548 8737 HBL1_DMSO_200M_050219_2,8753 HBL1_DMSO_200M_050219_2,8753, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8754 47.555 192.0 335090.0 25 0 24210.0 + + -1 TAHPSPLSV 9 109 454.7429579112785 907.471362889357 2 454.7431213259697 MULTI CID FTMS 0 0 0 8737 119331.5 0.2751332541064197 -3 0.3175163269042969 17 Oxidation (M) _ATVTAM(Oxidation (M))ISV_ nc|ENSG00000076248|P13051-2|UNG;ENSG00000076248|ENST00000242576|UNG 16.942295170755138 0.3780752226737986 4 [TA]H[PS][{I|L}P]W 8 -1 + 35.658 0.0 0.0 3.9293 3.9293 81.182 0.0 0.0 0.0 6.801329033162428 -3.0362776550893003 -3.0362776550893003 20.9193409292021 0 0.0 1.6989700043360187 0.8033121444636098 0.0 [TA]H[PS][{I|L}P]W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}P]PA[PA]V;[HA]T[PS][{I|L}P]W;{NN|[MP]|[D{I|L}]|[EV]}KP[{I|L}P][EP];{NN|[MP]|[D{I|L}]|[EV]}[HQ][{I|L}P]W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}P]PA{I|L}[PG];[HA]{[VA]|[{I|L}G]}D[{I|L}P]W;{[VA]|[{I|L}G]}[HA]D[{I|L}P]W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}P]PAV[PA];[{I|L}P][YK]{[DS]|[MA]|[CV]|TT}W 3.9293;1.6241;1.5134;1.2954;1.1339;0.96066;0.84508;0.76183;0.69284;0.45964 -;-;-;-;-;-;-;-;-;- 259 1 1.749 57799.3 1.0 4204 4548 8737 HBL1_DMSO_200M_050219_2,8754 HBL1_DMSO_200M_050219_2,8754,ATVTAMISV False False TAHPSPLSV 47.555004 454.74312132597 6249746.0 8737.0 nc|ENSG00000076248|P13051-2|UNG;;ENSG00000076248|ENST00000242576|UNG 3.8154918352762857 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8755 47.564 530.0 207110.0 25 0 24067.0 + + -1 SYFRASSTM 9 138 525.2413405053123 0 525.2397949099541 PEAK CID FTMS 0 0 0 8737 109778.96875 1.0 0 0.0 18 Oxidation (M) _YSYRNM(Oxidation (M))SI_ ENSG00000197601|ENST00000354817|FAR1 24.67388899826682 0.3296343502680589 4 TSW 3 -1 13.914 0.0 0.0 1.3271 0.0 0.0 149.05810718074332 522.2116182916624 671.2697254724058 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.3252574989159953 0.0 TSW 1.3271 - 81 + 1 1.749 88681.2 1.0 4205 4548 8737 HBL1_DMSO_200M_050219_2,8755 HBL1_DMSO_200M_050219_2,8755,YSYRNMSI False False SYFRASSTM 47.564334 525.239794909954 702955.875 8737.0 ENSG00000197601|ENST00000354817|FAR1 3.7464638551076255 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8757 47.569 30.0 2326800.0 25 0 240380.0 + 39218 TYVTPRRPF 9 75 379.5453070792246 1135.6140918378735 3 379.5450622439384 MULTI CID FTMS 0 0 0 8756 1558402.25 0.9778221699868668 1 -0.06488037109375 1 Unmodified _TYVTPRRPF_ ENSG00000170889|ENST00000302907|RPS9;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 29.081581746732265 0.1611639662936252 4 TY{M(Oxidation (M))|F} 3 6 49.253 0.0 0.0 4.3371 0.0 0.0 0.0 721.409954204411 721.409954204411 30.211440694835822 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 TY{M(Oxidation (M))|F} 4.3371 - 56 + 1 1.749 69227.9 1.0 4206 4549 8756 HBL1_DMSO_200M_050219_2,8757 HBL1_DMSO_200M_050219_2,8757,TYVTPRRPF False True TYVTPRRPF 47.569071 379.545062243938 80367388.0 8756.0 ENSG00000170889|ENST00000302907|RPS9;;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 6.6192982991536455 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8758 47.57 44.0 1602300.0 25 0 119160.0 28285 PRLTYKTV 8 87 489.2925132183994 976.5704735035988 2 489.2927123904228 MULTI CID FTMS 0 0 0 8756 1421392.75 0.9725747772454384 -1 0.104034423828125 2 Unmodified _PRLTYKTV_ ENSG00000147416|ENST00000276390|ATP6V1B2;ENST00000523482.5_1_8:20054917-20070443:+|nuORF 24.67388899826682 0.525179942228231 4 [R{I|L}]PPP[TP]TV 9 6 + 49.802 0.0 0.0 5.0997 5.0997 83.5 0.0 0.0 0.0 16.285057953210313 30.580211763838665 16.285057953210313 11.00833760139686 0 1.024227503252014 1.154901959985743 0.5 0.2887254899964357 [R{I|L}]PPP[TP]TV;[R{I|L}]PPP{[VA]|[{I|L}G]}EV;[R{I|L}][YK][TP]TV;[R{I|L}][YK]{[VA]|[{I|L}G]}EV;[YV]{I|L}{I|L}[RN]TV;[R{I|L}][YG][K{I|L}]EV 5.0997;3.9724;2.139;1.0118;0.57562;0.29603 -;-;-;-;-;- 128 1 1.749 58715.5 1.0 4207 4549 8756 HBL1_DMSO_200M_050219_2,8758 HBL1_DMSO_200M_050219_2,8758,PRLTYKTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8759 47.572 70.0 1182200.0 25 0 108810.0 + 22996 SLHSKFIRV 9 95 362.82440988503663 1085.45140025531 3 362.8245727419853 MULTI CID FTMS 0 0 0 8756 678842.375 0.6003783305960692 1 -0.06488037109375 3 Unmodified _LSHEDEEVE_ ENSG00000150907|ENST00000379561|FOXO1 4.897010918128616 0.7437319958283661 4 {I|L}HSK{M(Oxidation (M))|F}{I|L}RV 8 7 38.581 0.0 0.0 3.5544 0.0 0.0 86.85153133832644 0.0 86.85153133832644 0.0 17.383512853885108 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}HSK{M(Oxidation (M))|F}{I|L}RV 3.5544 - 180 + 1 1.749 75189.8 1.0 4208 4549 8756 HBL1_DMSO_200M_050219_2,8759 HBL1_DMSO_200M_050219_2,8759,LSHEDEEVE False False SLHSKFIRV 47.571942 362.824572741985 11072457.0 8756.0 ENSG00000150907|ENST00000379561|FOXO1 4.901201883951823 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8760 47.574 85.0 672590.0 25 0 66560.0 + 25001 MPPPPPQGV 9 87 460.23852327962805 918.462493626056 2 460.2389099001884 MULTI CID FTMS 0 0 0 8756 596936.6875 0.0322110514672799 91 -7.237388610839844 4 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 67.03532852164291 0.0222449892513529 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 41.732 0.0 0.0 4.5437 4.5437 72.349 0.0 0.0 0.0 0.5133278187140036 29.51335651524652 0.5133278187140036 3.3387099440879666 0 1.5356668758921828 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{[RE]|[WV]}HPPQGV;[NP]NPPPQR;[VG]EPHPQR;[NP]GGPPPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQGV;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR;[VG]EPPHQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;[VG][WH]HQR 4.5437;4.1802;3.566;2.9364;2.5576;2.0986;1.7175;1.5179;1.4328;1.0471 -;-;-;-;-;-;-;-;-;- 296 1 1.749 53024.3 1.0 4209 4549 8756 HBL1_DMSO_200M_050219_2,8760 HBL1_DMSO_200M_050219_2,8760,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8761 47.576 117.0 734230.0 25 0 184640.0 + 39220 TYVTPRRPF 9 67 568.8132453627392 1135.6119377922782 2 568.8142578005791 MULTI CID FTMS 0 0 0 8756 552193.6875 0.8798946767416715 1 -0.06488037109375 5 Unmodified _TYVTPRRPF_ ENSG00000170889|ENST00000302907|RPS9;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 25.399314129420983 0.2080152500878129 4 [YT]VT 4 5 35.049 0.0 0.0 3.0864 0.0 0.0 0.0 668.3627977378438 668.3627977378438 11.616136822334363 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [YT]VT 3.0864 + + 104 1 1.749 70583.7 1.0 4210 4549 8756 HBL1_DMSO_200M_050219_2,8761 HBL1_DMSO_200M_050219_2,8761,TYVTPRRPF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8762 47.578 90.0 520610.0 25 0 50502.0 + 29732 QPLQNVSTV 9 87 493.2692219437838 984.5238909543676 2 493.2693054080009 MULTI CID FTMS 0 0 0 8756 453252.09375 0.4675863025442199 -2 0.1987571716308593 6 Unmodified _QPLQNVSTV_ nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1 21.74664581756881 0.2544899275067181 4 {[QN]|[E{I|L}]|[KN]}[H{I|L}]HHTV 8 5 + 32.44 0.0 0.0 3.295 3.295 79.08 0.0 0.0 0.0 8.861147182067903 14.904630595263413 8.861147182067903 18.750612633917 0 0.0 0.0 0.3054621874040891 0.0 {[QN]|[E{I|L}]|[KN]}[H{I|L}]HHTV;{[QN]|[E{I|L}]|[KN]}[RH][KC]TV;{[QN]|[E{I|L}]|[KN]}[H{I|L}]H{I|L}[HS] 3.295;1.3905;0.83335 -;-;- 238 + 1 1.749 42126.1 1.0 4211 4549 8756 HBL1_DMSO_200M_050219_2,8762 HBL1_DMSO_200M_050219_2,8762,QPLQNVSTV False True QPLQNVSTV 47.578269 493.269305408001 8741036.0 8756.0 nc|ENSG00000113282|Q14677-2|CLINT1;;nc|ENSG00000113282|Q14677-3|CLINT1 4.844016313552856 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 8763 47.582 204.0 381080.0 25 0 23471.0 29974 QSWKEEEK 8 120 532.257470135016 0 532.2568237185478 PEAK CID FTMS 0 0 0 8756 204268.734375 0.6176661353927372 -2 0.1987571716308593 7 Unmodified _QSWKEEEK_ ENSG00000164877|ENST00000297508|MICALL2;ENST00000467394.5_1_7:1474234-1480903:-|nuORF;ENST00000472100.5_1_7:1474569-1480903:-|nuORF;ENST00000479007.5_1_7:1474234-1478659:-|nuORF;ENST00000487187.1_1_7:1476413-1478653:-|nuORF;ENST00000496184.1_1_7:1478437-1478659:-|nuORF;nc|ENSG00000164877|Q8IY33-3|MICALL2;nc|ENSG00000164877|Q8IY33-5|MICALL2 28.486842064014134 0.2575685520298453 4 WES 3 6 27.945 0.0 0.0 2.6301 0.0 0.0 215.0948531807124 442.2306307428344 657.3254839235468 0.0 0.0 0.0 0.0 0 0.5 0.0 0.6747425010840047 0.0 WES 2.6301 - 184 + 1 1.749 64841.0 1.0 4212 4549 8756 HBL1_DMSO_200M_050219_2,8763 HBL1_DMSO_200M_050219_2,8763,QSWKEEEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8764 47.588 334.0 305910.0 25 0 26399.0 + 25083 MPVTPQASV 9 133 465.2413778613167 928.4682027894336 2 465.2414428591728 MULTI CID FTMS 0 0 0 8756 205551.5 0.1399256520633309 -5 0.4933204650878906 8 Unmodified _MPVTPQASV_ ENSG00000115825|ENST00000234179|PRKD3;ENST00000494667.5_1_2:37496701-37543667:-|nuORF;nc|ENSG00000115825|O94806-2|PRKD3 46.020951573049366 0.0490941689151868 4 [VP]TM[QP]ASV 9 2 + 43.227 0.0 0.0 4.6558 4.6558 77.016 0.0 0.0 0.0 6.623855178835925 7.807802886139541 6.623855178835925 6.623855178835925 0 1.0924778212679485 0.9208187539523752 0.7742275032520141 0.0 [VP]TM[QP]ASV;[QP]ASV[NG]ASV;[TP]VM[QP]ASV;[VP]T[PA]GMASV;{[TV]|[{I|L}S]}PM[QP]ASV;[VS]A[NG][QP]ASV;[VP]T[QP]MASV;[PS]{I|L}M[QP]ASV;[QP]AN{[QD]|[EN]|[WG]|[KD]|[RS]}ASV;[QP]AS[RN]ASV 4.6558;3.9424;3.9077;3.8741;3.754;3.6971;3.6844;3.6547;3.5583;3.4298 -;-;-;-;-;-;-;-;-;- 865 1 1.749 83690.2 1.0 4213 4549 8756 HBL1_DMSO_200M_050219_2,8764 HBL1_DMSO_200M_050219_2,8764,MPVTPQASV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8765 47.594 312.0 276630.0 25 0 62363.0 + 45932 YYYDKNIIH 9 98 410.2044349624881 1227.5914754876642 3 410.2040588259697 MULTI CID FTMS 0 0 0 8756 169494.328125 1.0 0 0.0 9 Unmodified _YYYDKNIIH_ ENSG00000134954|ENST00000392668|ETS1;ENSG00000157557|ENST00000360938|ETS2;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-4|ETS1;nc|ENSG00000134954|P14921|ETS1 29.081581746732265 0.1611639662936252 4 YYYDK{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}H 9 0 + 74.857 0.0 0.0 6.0978 6.0978 87.327 0.0 0.0 0.0 36.47817481888637 10.0 10.0 10.0 0 0.3252574989159953 2.0 0.0 0.0 + + YYYDK{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}H;YYYDK{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L} 6.0978;5.2832 +;- + 252 + 1 1.749 71958.4 1.0 4214 4549 8756 HBL1_DMSO_200M_050219_2,8765 HBL1_DMSO_200M_050219_2,8765,YYYDKNIIH False True YYYDKNIIH 47.593886 410.20405882597 1409908.875 8756.0 nc|ENSG00000134954|P14921-4|ETS1;;nc|ENSG00000134954|P14921-2|ETS1;;ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;ENSG00000157557|ENST00000360938|ETS2 7.843307177225749 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8766 47.602 430.0 306570.0 25 0 23556.0 + 25581 NFFDQTSSS 9 152 516.7172945033878 1031.4200360735756 2 516.7182494997978 MULTI CID FTMS 0 0 0 8756 165691.765625 0.6584296571336322 -3 0.3225173950195312 10 Unmodified _NFFDQTSSS_ REV__ENSG00000099991|ENST00000263119|CABIN1;REV__nc|ENSG00000099991|Q9Y6J0-2|CABIN1 13.90604991867851 0.4602628045680013 4 N[EC]GT{M(Oxidation (M))|F}SR 8 -1 35.851 0.0 0.0 3.4759 0.0 0.0 119.07386214423984 0.0 119.07386214423984 0.0 19.65350013324773 0.0 0.0 0 1.0172203223519531 0.0 0.4247425010840047 0.3807196863200844 N[EC]GT{M(Oxidation (M))|F}SR 3.4759 - 245 1 1.749 104028.2 1.0 4215 4549 8756 HBL1_DMSO_200M_050219_2,8766 HBL1_DMSO_200M_050219_2,8766,NFFDQTSSS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8767 47.615 800.0 116130.0 25 0 7242.7 + 26218 NQIKKIENLEA 11 143 650.3673427792515 1298.720132625303 2 650.3674804568291 MULTI CID FTMS 0 0 0 8756 163801.046875 0.9177592082836624 -1 0.104034423828125 11 Unmodified _NQIKKIENLEA_ ENSG00000115685|ENST00000234038|PPP1R7;nc|ENSG00000115685|Q15435-2|PPP1R7;nc|ENSG00000115685|Q15435-3|PPP1R7;nc|ENSG00000115685|Q15435-4|PPP1R7;nc|ENSG00000115685|Q15435-5|PPP1R7 98.72992552434108 0.0003628247892426 4 {[QN]|[E{I|L}]|[KN]}{I|L}KK{I|L}EN{I|L}EA 11 0 + 87.227 0.0 0.0 6.7164 6.7164 83.846 0.0 0.0 0.0 13.99604635218256 16.575773191777927 13.99604635218256 5.388728364440141 0 1.4517188504113845 0.8538719643217619 0.4436726795685343 2.234636880228201 + + {[QN]|[E{I|L}]|[KN]}{I|L}KK{I|L}EN{I|L}EA;{[QN]|[E{I|L}]|[KN]}{I|L}KK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}EA;{[QN]|[E{I|L}]|[KN]}{I|L}KK{I|L}EGG{I|L}EA;{[QV]|[N{I|L}]|[RA]|[KV]}QKK{I|L}EN{I|L}EA;GGQ{I|L}KK{I|L}EN{I|L}EA;{[QV]|[N{I|L}]|[RA]|[KV]}QKK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}EA;GGQ{I|L}KK{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}EA;{[QV]|[N{I|L}]|[RA]|[KV]}QKK{I|L}EGG{I|L}EA;{[QV]|[N{I|L}]|[RA]|[KV]}[AG]KK{I|L}EN{I|L}EA;GGQ{I|L}KK{I|L}EGG{I|L}EA 6.7164;6.3014;6.0135;5.6387;5.6306;5.2238;5.2157;4.9358;4.9358;4.9301 +;-;-;-;-;-;-;-;-;- + 1484 1 1.749 75039.4 0.7400000095367432 4216 4549 8756 HBL1_DMSO_200M_050219_2,8767 HBL1_DMSO_200M_050219_2,8767,NQIKKIENLEA True True NQIKKIENLEA 47.61539 650.367480456829 1513885.25 8756.0 ENSG00000115685|ENST00000234038|PPP1R7;;nc|ENSG00000115685|Q15435-4|PPP1R7;;nc|ENSG00000115685|Q15435-3|PPP1R7;;nc|ENSG00000115685|Q15435-5|PPP1R7;;nc|ENSG00000115685|Q15435-2|PPP1R7 6.102278868357341 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8768 47.629 800.0 163820.0 25 0 10588.0 13362 HLGSLPCPPAK 11 182 560.3027074007191 1118.590861868238 2 560.3024169802666 MULTI CID FTMS 0 0 0 8756 149217.546875 0.4664638143273439 4 -0.334625244140625 12 Unmodified _HLGSLPCPPAK_ ENST00000301178.8_1_19:41748860-41749532:+|nuORF 24.99096001346401 0.505407273373304 4 [{I|L}A]D[KS][{I|L}P]T{M(Oxidation (M))|F}K 10 7 + 58.517 0.0 0.0 5.2313 5.2313 78.195 0.0 0.0 0.0 5.665156422191799 4.203103093438969 4.203103093438969 5.665156422191799 0 1.2302046884880935 1.3010299956639813 0.6549471895720985 0.0 [{I|L}A]D[KS][{I|L}P]T{M(Oxidation (M))|F}K;{NN|[MP]|[D{I|L}]|[EV]}A[KS][{I|L}P]T{M(Oxidation (M))|F}K;[{I|L}A]D[KS][{I|L}P]TT{[CA]|SS};{NN|[MP]|[D{I|L}]|[EV]}A[KS][{I|L}P]TT{[CA]|SS};[{I|L}A]G{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[PS][{I|L}P]T{M(Oxidation (M))|F}K;[H{I|L}][YT][{I|L}P]T{M(Oxidation (M))|F}K;{[TV]|[{I|L}S]}[WQ][{I|L}P]T{M(Oxidation (M))|F}K;[{I|L}A]D[KS][{I|L}P]GVGY;{[DS]|[MA]|[CV]|TT}P[KS][{I|L}P]T{M(Oxidation (M))|F}K 5.2313;4.7249;4.5899;4.0835;3.9376;3.7079;3.6456;3.3477;3.225;3.207 -;-;-;-;-;-;-;-;-;- 1275 1 1.749 100524.4 0.7200000286102295 4217 4549 8756 HBL1_DMSO_200M_050219_2,8768 HBL1_DMSO_200M_050219_2,8768,HLGSLPCPPAK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8770 47.642 517.0 185130.0 25 0 16877.0 + 6376 DVYESSVKV 9 126 513.2609178654473 1024.5072827976944 2 513.2604247927666 MULTI CID FTMS 0 0 0 8769 86142.640625 0.0367279607546439 4 -0.3762855529785156 1 Unmodified _DVYESSVKV_ ENSG00000042429|ENST00000251871|MED17 22.736283301280096 0.2418982879461534 4 [DV]YE 4 5 40.802 0.0 0.0 3.9826 0.0 0.0 0.0 515.2825028161155 515.2825028161155 19.146518864155126 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.0 + [DV]YE 3.9826 + + 207 + 1 1.76 80434.5 1.0 4218 4550 8769 HBL1_DMSO_200M_050219_2,8770 HBL1_DMSO_200M_050219_2,8770,DVYESSVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8771 47.644 93.0 1023000.0 25 0 84430.0 + 33958 SLHSKFIRV 9 112 362.88524200327817 1085.6338966100343 3 362.8853637576103 MULTI CID FTMS 0 0 0 8769 734238.5625 1.0 0 0.0 2 Unmodified _SLHSKFIRV_ ENSG00000150907|ENST00000379561|FOXO1 66.45667989310934 0.0225072657982126 4 VTHSK{M(Oxidation (M))|F}{I|L}RV 9 2 + 95.805 0.0 0.0 8.8248 8.8248 82.34 0.0 0.0 0.0 3.0102999566398125 1.6272729749770036 1.6272729749770036 1.6272729749770036 0 0.8921590589602532 2.0 0.3054621874040891 0.5649093276264391 VTHSK{M(Oxidation (M))|F}{I|L}RV;VTHSK{M(Oxidation (M))|F}{I|L}VR;S{I|L}HSK{M(Oxidation (M))|F}{I|L}RV;S{I|L}HSK{M(Oxidation (M))|F}{I|L}VR;VTHSK{M(Oxidation (M))|F}V{I|L}R;S{I|L}HSK{M(Oxidation (M))|F}V{I|L}R;VTHSKV{M(Oxidation (M))|F}{I|L}R;S{I|L}HSKV{M(Oxidation (M))|F}{I|L}R;VTHV[KS]{M(Oxidation (M))|F}{I|L}R;S{I|L}HV[KS]{M(Oxidation (M))|F}{I|L}R 8.8248;8.6749;8.5475;8.3976;8.1769;7.8996;7.7374;7.4601;5.7289;5.4516 -;-;+;-;-;-;-;-;-;- + 470 + 1 1.76 82635.7 1.0 4219 4550 8769 HBL1_DMSO_200M_050219_2,8771 HBL1_DMSO_200M_050219_2,8771,SLHSKFIRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8772 47.646 87.0 749470.0 25 0 68297.0 + 21796 LPNGVTQKI 9 92 485.28982189726895 968.565090861338 2 485.2901794314384 MULTI CID FTMS 0 0 0 8769 458177.875 0.9520328848494568 -1 0.06488037109375 3 Unmodified _LPNGVTQKI_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 31.26834338654808 0.1333407332142048 4 {I|L}PNGV[QT]K{I|L} 9 0 + 51.244 0.0 0.0 5.2907 5.2907 82.723 0.0 0.0 0.0 13.405338034998728 4.727431120499119 4.727431120499119 9.208187539523747 0 0.25 1.6989700043360187 0.0 0.3494850021680094 + + {I|L}PNGV[QT]K{I|L};{I|L}PGGGV[QT]K{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PS][{I|L}A]{I|L}PK;[QT][QA][{I|L}A]{I|L}PK;[KQ][DG][{I|L}A]{I|L}PK 5.2907;4.34;3.4669;1.0634;0.91394 +;-;-;-;- + 308 + 1 1.76 58628.3 1.0 4220 4550 8769 HBL1_DMSO_200M_050219_2,8772 HBL1_DMSO_200M_050219_2,8772,LPNGVTQKI False True LPNGVTQKI 47.646131 485.290179431438 3435325.25 8769.0 nc|ENSG00000118058|Q03164-2|KMT2A;;nc|ENSG00000118058|Q03164|KMT2A;;ENSG00000118058|ENST00000534358|KMT2A 3.2588628927866616 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8773 47.649 145.0 614250.0 25 0 120640.0 + 15713 IQVTKVTQV 9 110 508.31086889001136 1014.6071848468227 2 508.3113586306572 MULTI CID FTMS 0 0 0 8769 454194.40625 0.0899027953641098 -3 0.2636375427246094 4 Unmodified _IQVTKVTQV_ ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1 81.89019881105858 0.0170587746866453 4 {[TV]|[{I|L}S]}KVTQVQ{I|L} 9 4 + 67.084 0.0 0.0 6.6119 6.6119 84.423 0.0 0.0 0.0 6.374474759982917 14.61635608164464 6.374474759982917 6.237125054200234 0 0.0 0.7958800173440752 1.6936726795685342 0.3807196863200844 {[TV]|[{I|L}S]}KVTQVQ{I|L};{[TV]|[{I|L}S]}KVQTVQ{I|L};[KT]VVTQVQ{I|L};{[TV]|[{I|L}S]}KVTQV[AG]{I|L};{[TV]|[{I|L}S]}KVT[AG]VQ{I|L};[Q{I|L}]V[KS]TVQ{I|L};{[TV]|[{I|L}S]}KTVQVQ{I|L};{[TV]|[{I|L}S]}KQVTVQ{I|L};[Q{I|L}][KS]VTVQ{I|L};[KT]VVQTVQ{I|L} 6.6119;5.9971;5.9836;5.7043;5.7043;5.5745;5.5043;5.4527;5.4261;5.3689 -;-;-;-;-;-;-;-;-;- 1760 1 1.76 74020.1 1.0 4221 4550 8769 HBL1_DMSO_200M_050219_2,8773 HBL1_DMSO_200M_050219_2,8773,IQVTKVTQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8774 47.652 177.0 395430.0 25 0 31281.0 + 25639 NFQTAKEAL 9 111 511.26911178545816 1020.5236706377164 2 511.2690612673759 MULTI CID FTMS 0 0 0 8769 300873.3125 0.5721781055188397 -2 0.168914794921875 5 Unmodified _NFQTAKEAL_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 51.629811660486645 0.0367964933207742 4 [KA]ETAGA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L} 10 7 + 33.085 0.0 0.0 3.242 3.242 61.971 0.0 0.0 0.0 0.1739417926736592 2.003187623076954 0.1739417926736592 0.1739417926736592 0 0.3252574989159953 0.0 0.5752574989159953 1.4517188504113845 [KA]ETAGA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L};[QT]VTAGA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L};[KA]ETAG[KG]{M(Oxidation (M))|F}{I|L};[KA]TEAGA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L};[QT]VTAG[KG]{M(Oxidation (M))|F}{I|L};[KA]ETAGA{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[QT]VTAGA{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[KA]ETAQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L};[QT]VTAQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L};[KA]TEAG[KG]{M(Oxidation (M))|F}{I|L} 3.242;3.2249;3.097;3.0869;3.08;3.0457;3.0286;2.9913;2.9743;2.9419 -;-;-;-;-;-;-;-;-;- 1223 1 1.76 59617.3 1.0 4222 4550 8769 HBL1_DMSO_200M_050219_2,8774 HBL1_DMSO_200M_050219_2,8774,NFQTAKEAL True True NFQTAKEAL 47.652466 511.269061267376 4446321.5 8769.0 nc|ENSG00000129003|Q709C8-3|VPS13C;;ENSG00000129003|ENST00000644861|VPS13C;;nc|ENSG00000129003|Q709C8-4|VPS13C;;nc|ENSG00000129003|Q709C8-2|VPS13C 6.603526592254639 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8775 47.656 187.0 352150.0 25 0 36599.0 35300 SSRDFFSSL 9 105 523.2512003141476 1044.487847695095 2 523.2512695193291 MULTI CID FTMS 0 0 0 8769 238402.390625 0.6929691424356683 -2 0.168914794921875 6 Unmodified _SSRDFFSSL_ ENSG00000185917|ENST00000332131|SETD4;nc|ENSG00000185917|Q9NVD3-3|SETD4;nc|ENSG00000185917|Q9NVD3-4|SETD4 43.85829265575387 0.0542763391141878 4 ESGSS{I|L} 6 5 54.1 0.0 0.0 5.1796 0.0 0.0 466.2331715314469 0.0 466.2331715314469 0.0 41.74261861203093 0.0 0.0 0 0.9247425010840048 0.0 1.0941876774005248 0.0 ESGSS{I|L} 5.1796 - 685 1 1.76 55160.7 1.0 4223 4550 8769 HBL1_DMSO_200M_050219_2,8775 HBL1_DMSO_200M_050219_2,8775,SSRDFFSSL True True RFYESGSSL 47.656087 523.251269519329 3305750.5 8769.0 ENST00000472135.2_1_X:83695455-83724556:-|nuORF;;nc|ENSG00000165259|Q7Z353-2|HDX;;ENSG00000165259|ENST00000373177|HDX 3.994476318359375 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8776 47.663 378.0 182900.0 25 0 39037.0 + 38892 TVLDENKNTAL 11 105 609.3222259357523 1216.6298989383044 2 609.3225585818291 MULTI CID FTMS 0 0 0 8769 198659.265625 0.8270139881887231 -1 0.06488037109375 7 Unmodified _TVLDENKNTAL_ ENSG00000139645|ENST00000267116|ANKRD52 73.1962812333195 0.0231417158388345 4 {[TV]|[{I|L}S]}{I|L}D[NG]NTA{I|L}S{I|L} 12 4 + 75.471 0.0 0.0 6.2033 6.2033 76.272 0.0 0.0 0.0 6.283955851475454 33.0706183336318 6.283955851475454 1.8309843995574224 0 1.5924778212679485 2.0 1.0010912013506126 0.3494850021680094 {[TV]|[{I|L}S]}{I|L}D[NG]NTA{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}D[NG]NTVTA{I|L};{[TV]|[{I|L}S]}{I|L}D[NG]GGTA{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}D[NG]GGTVTA{I|L};{[TV]|[{I|L}S]}[QA]EANTA{I|L}S{I|L};{[TV]|[{I|L}S]}[QA]EANTVTA{I|L};{[TV]|[{I|L}S]}{I|L}D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YYA{I|L};{[TV]|[{I|L}S]}{I|L}D[NS]{[QG]|[NA]}A{I|L}S{I|L};{[TV]|[{I|L}S]}[QA]EAGGTA{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}D[NS]{[QG]|[NA]}VTA{I|L} 6.2033;6.0528;5.4555;5.305;5.0753;4.9248;4.5602;4.3727;4.3275;4.2222 -;-;-;-;-;-;-;-;-;- 1430 1 1.76 55578.6 1.0 4224 4550 8769 HBL1_DMSO_200M_050219_2,8776 HBL1_DMSO_200M_050219_2,8776,TVLDENKNTAL True True TVLDENKNTAL 47.662883 609.322558581829 2019381.25 8769.0 ENSG00000139645|ENST00000267116|ANKRD52 6.338661988576253 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8777 47.677 800.0 172590.0 25 0 6302.4 + 25127 MQDDNQVMV 9 181 548.2253860739132 1094.4362192146264 2 548.2255126833916 MULTI CID FTMS 0 0 0 8769 162880.109375 0.4179641566081492 -3 0.2636375427246094 8 Oxidation (M) _MQDDNQVM(Oxidation (M))V_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 62.57269311338072 0.0246576765497938 4 {[QN]|[E{I|L}]|[KN]}DDMQV[{M(Oxidation (M))|F}V] 9 2 + 57.409 0.0 0.0 5.2455 5.2455 81.266 0.0 0.0 0.0 13.296444610697478 7.147642715192504 7.147642715192504 8.928643424857867 0 0.3252574989159953 1.6989700043360187 0.2396518287104437 1.5138793319624575 {[QN]|[E{I|L}]|[KN]}DDMQV[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DDVC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DDM[AG]V[{M(Oxidation (M))|F}V];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDNQV[{M(Oxidation (M))|F}V];[AG]MDDNQV[{M(Oxidation (M))|F}V];[AG]NDDMQV[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DDVCGV[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DVDC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V];[AG]DNDMQV[{M(Oxidation (M))|F}V];[AG]DMDNQV[{M(Oxidation (M))|F}V] 5.2455;4.4297;4.4041;4.0306;3.9919;3.8828;3.8389;3.6796;3.5192;3.5129 -;-;-;+;-;-;-;-;-;- + 1850 1 1.76 111459.7 0.7400000095367432 4225 4550 8769 HBL1_DMSO_200M_050219_2,8777 HBL1_DMSO_200M_050219_2,8777,MQDDNQVMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8779 47.681 23.0 1943200.0 25 0 306640.0 4908 DGKSLVSV 8 51 402.7274376081221 803.4403222830442 2 402.7267333865166 MULTI CID FTMS 0 0 0 8778 2540117.5 0.9861559236451684 1 -0.1321563720703125 1 Unmodified _DGKSLVSV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000517330.1_1_5:77337712-77337985:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P 37.97399986684836 0.2681860861828418 4 [VS]NS{I|L}VSV 8 3 + 64.531 0.0 0.0 8.0318 8.0318 92.721 0.0 0.0 0.0 15.898255349109505 47.54100322985387 15.898255349109505 9.262137858390815 0 0.8182503180159344 1.5228787452803376 1.3494850021680094 0.0 [VS]NS{I|L}VSV;[VS]GGS{I|L}VSV;[VS]NVTVSV;[KG]DS{I|L}VSV;[VS]GGVTVSV;[KG]DVTVSV;{[TV]|[{I|L}S]}[QA]TVSV;[VS][KS][TP]SV;{[VA]|[{I|L}G]}[QT]TVSV 8.0318;6.879;6.7538;5.6783;5.601;4.4003;2.2769;2.2148;1.714 -;-;-;-;-;-;-;-;- 141 1 1.76 44280.8 1.0 4226 4551 8778 HBL1_DMSO_200M_050219_2,8779 HBL1_DMSO_200M_050219_2,8779,DGKSLVSV False True KGNSLVSV 47.681443 402.726733386517 0.0 8778.0 ENSG00000164880|ENST00000404767|INTS1 0.2712870637575785 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8780 47.683 86.0 656780.0 25 0 100430.0 + 3780 DAHNVQAVI 9 88 483.75369134185513 965.4928297505104 2 483.7540466189384 MULTI CID FTMS 0 0 0 8778 634123.0625 0.5862656819037271 2 -0.2222518920898437 2 Unmodified _DAHNVQAVI_ ENSG00000258890|ENST00000556440|CEP95;ENST00000580188.1_2_17:62503129-62515542:+|nuORF 41.8396318013385 0.0653578398400075 4 NVQAV{I|L} 6 3 36.331 0.0 0.0 3.7629 0.0 0.0 323.1237660138688 0.0 323.1237660138688 0.0 20.84630327004689 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.4247425010840047 + NVQAV{I|L} 3.7629 + + 54 1 1.76 48155.8 1.0 4227 4551 8778 HBL1_DMSO_200M_050219_2,8780 HBL1_DMSO_200M_050219_2,8780,DAHNVQAVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8781 47.686 104.0 625110.0 25 0 83019.0 26821 PAPPPPQPL 9 95 457.2606688128342 912.5067846924684 2 457.2608520388603 MULTI CID FTMS 0 0 0 8778 546066.625 0.6376772986042074 5 -0.5419845581054688 3 Unmodified _PAPPPPQPL_ ENST00000317173.8_1_8:9911977-10102635:+|nuORF;ENST00000441698.6_1_8:9911977-10065409:+|nuORF 81.86404211737425 0.017065112157077 4 [PA]PPPP[QP]{I|L} 9 0 + 69.72 0.0 0.0 7.6405 7.6405 95.494 0.0 0.0 0.0 41.25998192498736 0.0091477235573336 0.0091477235573336 28.332567493688344 0 2.3494850021680094 2.0 0.0 0.6382104921644451 + + [PA]PPPP[QP]{I|L};[PA][YK]P[QP]{I|L};[PA]P[YK][QP]{I|L};[PA]P[KQ]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L} 7.6405;4.5356;4.4531;3.2985 +;-;-;- + 614 + 1 1.76 53692.4 1.0 4228 4551 8778 HBL1_DMSO_200M_050219_2,8781 HBL1_DMSO_200M_050219_2,8781,PAPPPPQPL True False APPPPPPQI 47.685581 457.26085203886 59637692.0 8778.0 ENSG00000105722|ENST00000222329|ERF;;nc|ENSG00000105722|P50548-2|ERF 6.2846730550130205 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8782 47.688 142.0 557180.0 25 0 41707.0 + 32112 RVLTVINQT 9 115 522.3134041557215 1042.612255378243 2 522.3139526247978 MULTI CID FTMS 0 0 0 8778 405365.34375 1.0 0 0.0 4 Unmodified _RVLTVINQT_ ENSG00000136942|ENST00000348462|RPL35;ENST00000487431.1_1_9:127620199-127623861:-|nuORF 37.07464296494664 0.0915153923251136 4 {[TV]|[{I|L}S]}[R{I|L}]V{I|L}NQT 9 2 + 46.402 0.0 0.0 4.4506 4.4506 79.329 0.0 0.0 0.0 0.570743364174433 -5.9987385884389965 -5.9987385884389965 9.208187539523747 0 0.7193641189828115 1.0457574905606752 0.2887254899964357 0.0 {[TV]|[{I|L}S]}[R{I|L}]V{I|L}NQT;{[TV]|[{I|L}S]}[R{I|L}]V{I|L}GGQT;{[TV]|[{I|L}S]}[R{I|L}]V{I|L}N[AG]T 4.4506;3.5674;3.5674 -;-;- 621 1 1.76 67499.4 1.0 4229 4551 8778 HBL1_DMSO_200M_050219_2,8782 HBL1_DMSO_200M_050219_2,8782,RVLTVINQT True True RVLTVINQT 47.688443 522.313952624798 3475336.0 8778.0 ENST00000487431.1_1_9:127620199-127623861:-|nuORF;;ENSG00000136942|ENST00000348462|RPL35 4.746941566467285 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8783 47.691 122.0 505030.0 25 0 61765.0 + 44852 YPPGKLEV 8 70 451.7527688641812 901.4909847951624 2 451.7529785037041 MULTI CID FTMS 0 0 0 8778 392491.5625 0.7151090997539425 -3 0.2164077758789062 5 Unmodified _YPPGKLEV_ ENSG00000176302|ENST00000317011|FOXR1;nc|ENSG00000176302|Q6PIV2-2|FOXR1 15.847184025352805 0.6768015514314958 4 YPPR 4 5 49.909 0.0 0.0 5.5363 0.0 0.0 0.0 385.209199133768 385.209199133768 35.657205584423366 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPPR 5.5363 - 95 + 1 1.76 53445.5 1.0 4230 4551 8778 HBL1_DMSO_200M_050219_2,8783 HBL1_DMSO_200M_050219_2,8783,YPPGKLEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8784 47.695 236.0 447130.0 25 0 77283.0 -1 0 81 966.4323678807548 1930.8501828283097 2 966.4338256716728 MULTI CID FTMS 0 0 0 8778 275754.40625 0.1927918709549092 11 -1.0071563720703125 6 4 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L}[EP]{I|L} 9 -1 21.621 0.0 0.0 1.1198 0.0 0.0 0.0 962.3323965336408 962.3323965336408 3.1779592247781387 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.9559771852360796 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L}[EP]{I|L} 1.1198 - 506 1 1.76 77128.1 1.0 4231 4551 8778 HBL1_DMSO_200M_050219_2,8784 HBL1_DMSO_200M_050219_2,8784, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8785 47.697 90.0 565130.0 25 0 33863.0 + + -1 SLHSKLFRV 9 99 543.7359241794802 1085.4572954257603 2 543.7343017458916 MULTI CID FTMS 0 0 0 8778 238737.03125 0.2203446689326097 3 -0.3287925720214844 7 Oxidation (M) _LGELYM(Oxidation (M))ESE_ nc|ENSG00000047346|Q32MH5-3|ATOSA;ENSG00000047346|ENST00000619572|ATOSA;nc|ENSG00000047346|Q32MH5-2|ATOSA 7.910154910731844 0.6385446671287552 4 {[VA]|[{I|L}G]}E 3 -1 28.429 0.0 0.0 2.619 0.0 0.0 0.0 783.2972061530496 783.2972061530496 0.1937732607613895 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[VA]|[{I|L}G]}E 2.619 + + 162 + 1 1.76 48398.1 1.0 4232 4551 8778 HBL1_DMSO_200M_050219_2,8785 HBL1_DMSO_200M_050219_2,8785,LGELYMESE False False SLHSKLFRV 47.697418 543.734301745892 1843211.875 8778.0 nc|ENSG00000047346|Q32MH5-3|ATOSA;;ENSG00000047346|ENST00000619572|ATOSA;;nc|ENSG00000047346|Q32MH5-2|ATOSA 1.6364316542943318 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8786 47.703 317.0 163690.0 25 0 9621.9 + -1 EGGGQTWFCGC 11 97 629.7346177843814 1257.454682635563 2 629.7354614138603 MULTI CID FTMS 0 0 0 8778 215170.34375 0.1123860144219434 5 -0.5419845581054688 8 2 Carbamidomethyl (C) _EGGGQTWFC(Carbamidomethyl (C))GC(Carbamidomethyl (C))_ REV__ENST00000511072.5_1_1:2985758-2985851:+|nuORF 3.2813086475875832 0.8596665074481906 4 [Q{I|L}]TVA 5 -1 31.208 0.0 0.0 2.4818 0.0 0.0 0.0 742.1355657744876 742.1355657744876 12.25029890504009 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.7887254899964358 0.3054621874040891 [Q{I|L}]TVA 2.4818 - 513 1 1.76 46620.8 1.0 4233 4551 8778 HBL1_DMSO_200M_050219_2,8786 HBL1_DMSO_200M_050219_2,8786,EGGGQTWFCGC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8787 47.717 800.0 286470.0 25 0 24704.0 + 25132 MQDESFCSN 9 169 559.2011562941068 1116.3877596550135 2 559.2015258669853 MULTI CID FTMS 0 0 0 8778 213705.046875 0.3672767051829777 -1 0.0474929809570312 9 Carbamidomethyl (C) _MQDESFC(Carbamidomethyl (C))SN_ REV__ENSG00000157106|ENST00000446231|SMG1;REV__nc|ENSG00000157106|Q96Q15-2|SMG1;REV__nc|ENSG00000157106|Q96Q15-3|SMG1;REV__nc|ENSG00000157106|Q96Q15-4|SMG1 53.832793166522166 0.0319663582346103 4 MQDD 4 -1 44.418 0.0 0.0 3.9787 0.0 0.0 0.0 624.2147796238268 624.2147796238268 6.462301525394608 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.841129063296272 0.3054621874040891 MQDD 3.9787 - 821 + 1 1.76 172349.1 0.8799999952316284 4234 4551 8778 HBL1_DMSO_200M_050219_2,8787 HBL1_DMSO_200M_050219_2,8787,MQDESFCSN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8788 47.731 800.0 174030.0 25 0 14937.0 + 41406 VPLDGRPMNI 10 139 564.2970550918537 1126.5795572505074 2 564.2974731326103 MULTI CID FTMS 0 0 0 8778 211063.25 0.3189414769497365 5 -0.5419845581054688 10 Oxidation (M) _VPLDGRPM(Oxidation (M))NI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 61.60191391372663 0.0323840705564037 4 VP{I|L}DGR[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]P 9 3 81.509 0.0 0.0 7.2351 0.0 0.0 0.0 82.06691156558827 82.06691156558827 49.57045404585048 0.0 0.0 0.0 0 1.7131582230515532 1.5228787452803376 0.3494850021680094 0.7059771852360797 VP{I|L}DGR[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]P 7.2351 - 1563 + 1 1.76 113132.2 0.8799999952316284 4235 4551 8778 HBL1_DMSO_200M_050219_2,8788 HBL1_DMSO_200M_050219_2,8788,VPLDGRPMNI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8789 47.734 141.0 300370.0 25 0 29824.0 + 5734 DPLWVPASL 9 76 499.2700292894194 996.5255056456388 2 499.2699462771416 MULTI CID FTMS 0 0 0 8778 209641.703125 0.4053129527348378 3 -0.3287925720214844 11 Unmodified _DPLWVPASL_ REV__ENST00000524846.5_1_8:144643499-144644514:+|nuORF;REV__ENST00000531184.5_1_8:144643499-144645071:+|nuORF 26.88365393820708 0.1891292719743517 4 [DP]{I|L}AR[EP]S{I|L} 9 -1 + 57.527 0.0 0.0 5.7727 5.7727 80.445 0.0 0.0 0.0 27.147642715192504 5.579919469776868 5.579919469776868 5.579919469776868 0 0.9247425010840048 2.0 0.6307196863200843 0.0 [DP]{I|L}AR[EP]S{I|L};[DP]{I|L}AR[EP]TV;{[TV]|[{I|L}S]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RA{I|L}{[HG]|PP};{[TV]|[{I|L}S]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[VG]A{I|L}{[HG]|PP};{[TV]|[{I|L}S]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[HQ]{I|L};[PS][Q{I|L}][{M(Oxidation (M))|F}V]{I|L}{[HG]|PP};{[TV]|[{I|L}S]}[QP][{M(Oxidation (M))|F}V]{I|L}{[HG]|PP} 5.7727;5.2128;2.741;1.817;1.5282;1.4177;0.98478 -;-;-;-;-;-;- 160 + 1 1.76 38512.7 1.0 4236 4551 8778 HBL1_DMSO_200M_050219_2,8789 HBL1_DMSO_200M_050219_2,8789,DPLWVPASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8790 47.737 198.0 412430.0 25 0 21417.0 24576 MLGWVQRVL 9 119 367.878241522863 1100.612895168789 3 367.8779785037041 MULTI CID FTMS 0 0 0 8778 202008.265625 0.2007410002368174 3 -0.3287925720214844 12 Unmodified _MLGWVQRVL_ ENSG00000070729|ENST00000251102|CNGB1;nc|ENSG00000070729|Q14028-3|CNGB1;nc|ENSG00000070729|Q14028-4|CNGB1 7.289230182591677 0.6602208344931196 4 M{I|L}[WR]{I|L} 5 4 25.713 0.0 0.0 2.3363 0.0 0.0 0.0 398.2156466119751 398.2156466119751 13.494850021680094 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 M{I|L}[WR]{I|L} 2.3363 - 72 + 1 1.76 70562.8 1.0 4237 4551 8778 HBL1_DMSO_200M_050219_2,8790 HBL1_DMSO_200M_050219_2,8790,MLGWVQRVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8791 47.752 800.0 92112.0 25 0 8059.0 + 16544 KAWEGLHENSV 11 124 635.3145588039392 1268.6145646746784 2 635.3155395388603 MULTI CID FTMS 0 0 0 8778 189569.890625 0.2646186969681794 3 -0.3287925720214844 13 Unmodified _KAWEGLHENSV_ chr12:8604892-8605215|31|16.84|0.02|9.9|-|ENST00000537228|AICDA,AICDA;ENSG00000111732|ENST00000229335|AICDA;ENST00000545576.1_1_12:8756882-8757648:-|nuORF;nc|ENSG00000111732|Q9GZX7-2|AICDA 65.59300239606772 0.0464463006822148 4 AWE{[VA]|[{I|L}G]}HENSV 10 1 67.585 0.0 0.0 5.3275 0.0 0.0 128.0953083722672 0.0 128.0953083722672 0.0 51.72167511924052 0.0 0.0 0 2.8723637474483468 0.0 0.4247425010840047 0.0 + AWE{[VA]|[{I|L}G]}HENSV 5.3275 + + 1165 1 1.76 60357.9 0.8100000023841858 4238 4551 8778 HBL1_DMSO_200M_050219_2,8791 HBL1_DMSO_200M_050219_2,8791,KAWEGLHENSV True True KAWEGLHENSV 47.752493 635.31553953886 12653688.5 8778.0 chr12:8604892-8605215|31|16.84|0.02|9.9|-|ENST00000537228|AICDA,AICDA;;nc|ENSG00000111732|Q9GZX7-2|AICDA;;ENSG00000111732|ENST00000229335|AICDA;;ENST00000545576.1_1_12:8756882-8757648:-|nuORF 7.926999568939209 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8792 47.755 118.0 382880.0 25 0 49874.0 + 25130 MQDEERYM 8 83 551.2196646481275 1100.424776363055 2 551.2191039919853 MULTI CID FTMS 0 0 0 8778 152842.125 0.5754171554019316 -2 0.1123733520507812 14 Unmodified _MQDEERYM_ ENSG00000150045|ENST00000617889|KLRF1;nc|ENSG00000150045|Q9NZS2-2|KLRF1;nc|ENSG00000150045|Q9NZS2-3|KLRF1;nc|ENSG00000150045|Q9NZS2-4|KLRF1 20.453626601364224 0.6087503291685402 4 MQDDV 5 5 36.287 0.0 0.0 3.2975 0.0 0.0 0.0 509.18030725650624 509.18030725650624 12.870156338638594 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 MQDDV 3.2975 - 141 + 1 1.76 45117.6 1.0 4239 4551 8778 HBL1_DMSO_200M_050219_2,8792 HBL1_DMSO_200M_050219_2,8792,MQDEERYM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8793 47.769 800.0 260530.0 25 0 59512.0 + 31924 RVADRLYGV 9 163 524.7985027587084 1047.5824525842168 2 524.7988159060478 MULTI CID FTMS 0 0 0 8778 153799.765625 0.8816649297337096 1 -0.1321563720703125 15 Unmodified _RVADRLYGV_ ENSG00000114520|ENST00000251775|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;ENST00000473417.5_1_3:125188296-125239016:-|nuORF;nc|ENSG00000114520|O95219-2|SNX4 38.17557092003332 0.0854718145212029 4 VGVWR{I|L}YGV 9 4 + 62.335 0.0 0.0 5.9503 5.9503 74.103 0.0 0.0 0.0 41.266734124050544 12.98332479720628 12.98332479720628 1.249387366082999 0 1.079689690656103 1.3979400086720375 0.0 0.4247425010840047 VGVWR{I|L}YGV;VGVADR{I|L}YGV;VGVWVG{I|L}YGV;VG[TP]SR{I|L}YGV;VG[TP]{I|L}RSYGV;VGVAQQKYGV;VGQKQG{I|L}YGV;VGQKK{M(Oxidation (M))|F}WGV;VRWR{I|L}YGV;VGVA[RV]EYGV 5.9503;5.8311;5.3617;5.3587;4.9575;4.7626;4.6663;4.4429;4.2034;4.1879 -;-;-;-;-;-;-;-;-;- 1016 + 1 1.76 162869.6 0.7300000190734863 4240 4551 8778 HBL1_DMSO_200M_050219_2,8793 HBL1_DMSO_200M_050219_2,8793,RVADRLYGV True True RVADRLYGV 47.768791 524.798815906048 1396224.125 8778.0 ENST00000473417.5_1_3:125188296-125239016:-|nuORF;;ENSG00000114520|ENST00000251775|SNX4;;nc|ENSG00000114520|O95219-2|SNX4;;ENST00000471751.5_1_3:125166625-125239024:-|nuORF 8.42968463897705 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8794 47.78 648.0 268800.0 25 0 40896.0 24369 MEVAAAKG 8 153 388.70224850675686 775.3899440803137 2 388.7017700076103 MULTI CID FTMS 0 0 0 8778 106215.2578125 0.6747609373827468 -1 0.0474929809570312 16 Unmodified _MEVAAAKG_ ENSG00000160216|ENST00000291572|AGPAT3;nc|ENSG00000160216|Q9NRZ7-2|AGPAT3;nc|ENSG00000160216|Q9NRZ7-3|AGPAT3 16.942295170755138 0.6606234159769251 4 ME{I|L}ERV 6 6 + 65.059 0.0 0.0 8.3905 8.3905 84.498 0.0 0.0 0.0 36.197887582883936 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.5 2.0 0.3807196863200844 0.2887254899964357 ME{I|L}ERV;ME{I|L}EVR;MEQAAKV;MEV[W{I|L}]V;MEV{[QN]|[E{I|L}]|[KN]}R;MEQ[KQ]{I|L};MEV[NG]KV;MEV{[RE]|[WV]}{I|L};MEKQQ{I|L};ME{I|L}[RD]{I|L} 8.3905;8.0023;7.0304;6.7646;6.7301;6.6177;6.4151;6.356;6.0534;5.8412 -;-;-;-;-;-;-;-;-;- 257 + 1 1.76 137047.1 1.0 4241 4551 8778 HBL1_DMSO_200M_050219_2,8794 HBL1_DMSO_200M_050219_2,8794,MEVAAAKG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8795 47.795 800.0 119490.0 25 0 10318.0 28508 PTLASLRYWW 10 125 646.8456771972922 1291.6768014613842 2 646.8452026247978 MULTI CID FTMS 0 0 0 8778 102325.5625 1.0 0 0.0 17 Unmodified _PTLASLRYWW_ nc|ENSG00000105341|Q9NW81-2|DMAC2;nc|ENSG00000105341|Q9NW81-3|DMAC2;nc|ENSG00000105341|Q9NW81-6|DMAC2 13.90604991867851 0.6142120002215601 4 {[QN]|[E{I|L}]|[KN]}Q{I|L}V{[NV]|[RG]}SP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 11 10 + 39.563 0.0 0.0 3.0629 3.0629 62.494 0.0 0.0 0.0 0.6006495560055285 0.7585922278378447 0.6006495560055285 0.6006495560055285 0 0.0 0.6989700043360187 1.610924374808178 0.0 {[QN]|[E{I|L}]|[KN]}Q{I|L}V{[NV]|[RG]}SP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]ATPV{[NV]|[RG]}SP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]APTV{[NV]|[RG]}SP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[TV]|[{I|L}S]}PSVV{[NV]|[RG]}SP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[VS]VTPV{[NV]|[RG]}SP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[VS]VPTV{[NV]|[RG]}SP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[PS]{I|L}SVV{[NV]|[RG]}SP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{NN|[MP]|[D{I|L}]|[EV]}[RV]V{[NV]|[RG]}SP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[TP]VSVV{[NV]|[RG]}SP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[PS]VS{I|L}V{[NV]|[RG]}SP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3.0629;3.0164;2.9551;2.9548;2.9481;2.8868;2.8693;2.8411;2.8297;2.8264 -;-;-;-;-;-;-;-;-;- 1981 1 1.76 76064.4 0.6200000047683716 4242 4551 8778 HBL1_DMSO_200M_050219_2,8795 HBL1_DMSO_200M_050219_2,8795,PTLASLRYWW False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 8796 47.809 800.0 241210.0 25 0 28175.0 28957 QDEVQQHEKWY 11 145 745.3384553507148 1488.6623577682294 2 745.3394042849541 MULTI CID FTMS 0 0 0 8778 98649.6875 0.0915068248863176 5 -0.5419845581054688 18 Unmodified _QDEVQQHEKWY_ ENSG00000164221|ENST00000379611|CCDC112;nc|ENSG00000164221|Q8NEF3|CCDC112 10.799506525563784 0.8105043987015127 4 {[DA]|[EG]}E{I|L}[YG]AQQNA{M(Oxidation (M))|F}Y 13 9 + 73.542 0.0 0.0 4.9401 4.9401 77.606 0.0 0.0 0.0 12.082675649945102 9.335913807240717 9.335913807240717 6.2461727505299365 0 0.6069758080123702 0.638272163982407 0.6109243748081782 0.8494850021680094 {[DA]|[EG]}E{I|L}[YG]AQQNA{M(Oxidation (M))|F}Y;{[DA]|[EG]}E{I|L}[YQ]QQNA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{I|L}E[YG]AQQNA{M(Oxidation (M))|F}Y;{[DA]|[EG]}E{I|L}[YG]A[AG]QNA{M(Oxidation (M))|F}Y;{[DA]|[EG]}E{I|L}[YG]AQ[AG]NA{M(Oxidation (M))|F}Y;{[DA]|[EG]}E{I|L}[YG]AQQGGA{M(Oxidation (M))|F}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[YE]EAQQNA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{I|L}T[{M(Oxidation (M))|F}T]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}W[YG]AQQNA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{I|L}E[YQ]QQNA{M(Oxidation (M))|F}Y 4.9401;4.5205;4.4706;4.3307;4.3307;4.3307;4.1285;4.1093;4.0626;4.051 -;-;-;-;-;-;-;-;-;- 13233 1 1.76 139145.6 0.550000011920929 4243 4551 8778 HBL1_DMSO_200M_050219_2,8796 HBL1_DMSO_200M_050219_2,8796,QDEVQQHEKWY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8798 47.814 7.3 5324300.0 25 0 875770.0 + 25125 MQDDNQVMV 9 64 540.2281223772479 1078.4416918212958 2 540.2288696169853 MULTI CID FTMS 0 0 0 8797 8106631.5 0.9929683693290012 -1 0.1321563720703125 1 Unmodified _MQDDNQVMV_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 38.17557092003332 0.0854718145212029 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDNQVMV 9 0 + 47.572 0.0 0.0 4.4112 4.4112 77.887 0.0 0.0 0.0 4.762036441594191 29.86880000633434 4.762036441594191 8.922815857436525 0 0.7742275032520141 0.0 0.0 1.174742501084005 + + {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDNQVMV;{[QN]|[E{I|L}]|[KN]}DDMQVMV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDGGQVMV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDN[AG]VMV;{[QN]|[E{I|L}]|[KN]}DDVC(Carbamidomethyl (C))VMV;{[QN]|[E{I|L}]|[KN]}DDM[AG]VMV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDGG[AG]VMV;[{M(Oxidation (M))|F}T]VQN[C(Carbamidomethyl (C))S][HS];{[QN]|[E{I|L}]|[KN]}DDV[CG]VMV;[{M(Oxidation (M))|F}T]V[AG]N[C(Carbamidomethyl (C))S][HS] 4.4112;3.5838;3.5573;3.5573;2.9132;2.7299;2.7075;2.6973;2.0593;1.8435 +;-;-;-;-;-;-;-;-;- + 173 1 1.771 40770.0 1.0 4244 4552 8797 HBL1_DMSO_200M_050219_2,8798 HBL1_DMSO_200M_050219_2,8798,MQDDNQVMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8799 47.815 29.0 1013800.0 25 0 97775.0 + 2492 AQYEHDLEVA 10 61 587.7722182638554 1173.5298835945107 2 587.7728759646416 MULTI CID FTMS 0 0 0 8797 1721071.875 0.5439627867241328 1 -0.0900955200195312 2 Unmodified _AQYEHDLEVA_ ENSG00000132341|ENST00000543796|RAN;ENST00000413691.2_1_4:174554896-174555010:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 31.26834338654808 0.266153677697784 4 D{I|L}EVA 5 5 29.891 0.0 0.0 2.5471 0.0 0.0 628.2636632128892 0.0 628.2636632128892 0.0 -3.230684275811207 -3.230684275811207 0.0 0 0.718765315847925 0.0 0.3494850021680094 0.0 + D{I|L}EVA 2.5471 + + 112 1 1.771 34534.0 1.0 4245 4552 8797 HBL1_DMSO_200M_050219_2,8799 HBL1_DMSO_200M_050219_2,8799,AQYEHDLEVA False True AQYEHDLEVA 47.814782 587.772875964642 71908434.0 8797.0 ENST00000413691.2_1_4:174554896-174555010:-|nuORF;;ENST00000455094.1_1_6:30454046-30454364:+|nuORF;;ENSG00000132341|ENST00000543796|RAN 7.323062737782796 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8800 47.816 46.0 1551800.0 25 0 319880.0 + 4500 DAYIPRTGV 9 53 496.26427452098034 990.5139961087608 2 496.2642394900322 MULTI CID FTMS 0 0 0 8797 1298069.5 0.3906428296013467 -2 0.1796493530273437 3 Unmodified _DAYIPRTGV_ ENSG00000164074|ENST00000645843|ABHD18;ENST00000473040.6_1_4:128905516-128956965:+|nuORF;nc|ENSG00000164074|Q0P651-2|ABHD18;nc|ENSG00000164074|Q0P651-3|ABHD18;nc|ENSG00000164074|Q0P651-4|ABHD18;nc|ENSG00000164074|Q0P651|ABHD18 20.41453444215458 0.284085796332423 4 {[DA]|[EG]}Y{I|L}V 5 4 48.456 0.0 0.0 4.892 0.0 0.0 0.0 426.2101229303344 426.2101229303344 41.46591250700361 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[DA]|[EG]}Y{I|L}V 4.892 - 26 + 1 1.771 61685.6 1.0 4246 4552 8797 HBL1_DMSO_200M_050219_2,8800 HBL1_DMSO_200M_050219_2,8800,DAYIPRTGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8801 47.817 52.0 1114900.0 25 0 197850.0 + 5764 DPPDGIKV 8 64 420.7265342156436 839.4385154980872 2 420.7267028689384 MULTI CID FTMS 0 0 0 8797 1113510.375 0.6395127314469989 4 -0.4098281860351562 4 Unmodified _DPPDGIKV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 29.081581746732265 0.4323690340403521 4 DPPD{[VA]|[{I|L}G]}KV 8 0 + 64.646 0.0 0.0 7.7011 7.7011 96.712 0.0 0.0 0.0 51.45873464120562 9.921525057367404 9.921525057367404 64.64632226744975 0 0.7302046884880937 2.0 0.0 0.0 + + DPPD{[VA]|[{I|L}G]}KV 7.7011 + + 81 + 1 1.771 52093.7 1.0 4247 4552 8797 HBL1_DMSO_200M_050219_2,8801 HBL1_DMSO_200M_050219_2,8801,DPPDGIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8802 47.819 49.0 1342400.0 25 0 120600.0 + 26060 NMVAKVDEV 9 86 502.7584434046168 1003.5023338760336 2 502.7579833865166 MULTI CID FTMS 0 0 0 8797 1020967.25 0.1603805224567031 -2 0.1796493530273437 5 Unmodified _NMVAKVDEV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 43.85829265575387 0.0542763391141878 4 [MN]V{M(Oxidation (M))|F}DVVAG 9 5 58.599 0.0 0.0 5.8394 0.0 0.0 0.0 68.0513170831664 68.0513170831664 43.99465342497472 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.4247425010840047 0.0 [MN]V{M(Oxidation (M))|F}DVVAG 5.8394 - 173 + 1 1.771 57610.3 1.0 4248 4552 8797 HBL1_DMSO_200M_050219_2,8802 HBL1_DMSO_200M_050219_2,8802,NMVAKVDEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8803 47.82 72.0 875750.0 25 0 105490.0 + 3642 DAELATRAL 9 84 480.26163039333136 958.5087078534629 2 480.2617980837822 MULTI CID FTMS 0 0 0 8797 886701.375 0.6364797170408082 -1 0.1321563720703125 6 Unmodified _DAELATRAL_ ENSG00000173801|ENST00000393931|JUP 69.10491478415734 0.0214449631113747 4 {[DA]|[EG]}E{I|L}ATRA{I|L} 9 0 + 77.299 0.0 0.0 8.0645 8.0645 97.199 0.0 0.0 0.0 54.923097630437056 8.838130309479027 8.838130309479027 52.012915133136815 0 1.3494850021680094 2.0 0.805462187404089 0.0 + + {[DA]|[EG]}E{I|L}ATRA{I|L};{[DA]|[EG]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{[QV]|[N{I|L}]|[RA]|[KV]}PV;{[DA]|[EG]}[RH][HK]PV;W{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}R[PG];W{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PG]RA{I|L} 8.0645;2.638;2.3268;1.5437;1.5407 +;-;-;-;- + 170 + 1 1.771 58987.8 1.0 4249 4552 8797 HBL1_DMSO_200M_050219_2,8803 HBL1_DMSO_200M_050219_2,8803,DAELATRAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8804 47.823 120.0 857090.0 25 0 79545.0 + 37719 TLQGGASL 8 111 373.7056012714487 745.3966496096974 2 373.7056457400322 MULTI CID FTMS 0 0 0 8797 402849.78125 0.6180053802241431 2 -0.1966361999511718 7 Unmodified _TLQGGASL_ REV__ENSG00000140575|ENST00000268182|IQGAP1 5.760428011301431 0.7893668129297577 4 ED{I|L}TR{I|L} 6 -1 + 56.806 0.0 0.0 7.621 7.621 87.243 0.0 0.0 0.0 22.58060922270801 6.020599913279625 6.020599913279625 6.020599913279625 0 0.1803115997617927 0.638272163982407 0.3494850021680094 0.0 ED{I|L}TR{I|L};ED{I|L}T{I|L}R;ED{I|L}{I|L}TR;{[{M(Oxidation (M))|F}D]|MM}[VP]R{I|L};{[{M(Oxidation (M))|F}D]|MM}[VP]{I|L}R 7.621;6.8133;6.0056;1.0229;0.21518 -;-;-;-;- 69 + 1 1.771 85521.3 1.0 4250 4552 8797 HBL1_DMSO_200M_050219_2,8804 HBL1_DMSO_200M_050219_2,8804,TLQGGASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8805 47.828 263.0 424120.0 25 0 39889.0 + 45204 YQVAAAESHPL 11 116 593.2983678373796 1184.582182741559 2 593.2993041872978 MULTI CID FTMS 0 0 0 8797 387093.125 0.4428955252569921 2 -0.1966361999511718 8 Unmodified _YQVAAAESHPL_ ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 43.77239144664712 0.1542841003880809 4 [YQ]V[YV]AAV{[WS]|[C(Carbamidomethyl (C)){I|L}]} 10 6 + 41.36 0.0 0.0 3.4916 3.4916 63.41 0.0 0.0 0.0 5.560574472004866 7.430059810756049 5.560574472004866 0.5237875363565792 0 0.0 1.0457574905606752 0.0 0.4247425010840047 [YQ]V[YV]AAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{M(Oxidation (M))|F}[{I|L}T]AAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AAAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]V[YV][Q{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]};[HS][DV][{I|L}T]AAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[VA]|[{I|L}G]}[YG][YV]AAV{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{M(Oxidation (M))|F}[{I|L}T][Q{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[Q{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.4916;3.4473;2.5084;2.0335;1.7639;1.376;1.2086;0.87864;0.26596 -;-;-;-;-;-;-;-;- 408 1 1.771 84932.9 1.0 4251 4552 8797 HBL1_DMSO_200M_050219_2,8805 HBL1_DMSO_200M_050219_2,8805,YQVAAAESHPL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8806 47.83 121.0 428850.0 25 0 41630.0 + -1 NYIEGTKML 9 95 542.7719287470218 1083.5293045608437 2 542.7708618044853 MULTI CID FTMS 0 0 0 8797 302400.59375 0.9494996464207944 -1 0.1321563720703125 9 Oxidation (M) _NYIEGTKM(Oxidation (M))L_ ENSG00000133313|ENST00000324262|CNDP2;nc|ENSG00000133313|Q96KP4-2|CNDP2 31.26834338654808 0.1333407332142048 4 [YN]{I|L}EGKT{M(Oxidation (M))|F}{I|L} 9 -1 + 55.734 0.0 0.0 5.1437 5.1437 53.127 0.0 0.0 0.0 42.1945033631016 3.925449767853309 3.925449767853309 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 [YN]{I|L}EGKT{M(Oxidation (M))|F}{I|L};[YN]{I|L}EGTK{M(Oxidation (M))|F}{I|L};[YN]{I|L}E[KS]P{M(Oxidation (M))|F}S;[YN]{I|L}E[KS]A{M(Oxidation (M))|F}{I|L};[YN]{I|L}EGVR{M(Oxidation (M))|F}S;[YN]{I|L}[WQ]T{M(Oxidation (M))|F}{I|L};[YN]{I|L}{[NV]|[RG]}TT{M(Oxidation (M))|F}{I|L};[YN]{I|L}E[KS][MT]V;{[QN]|[E{I|L}]|[KN]}HKGE{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]{I|L}[KA]DT{M(Oxidation (M))|F}{I|L} 5.1437;5.1437;4.682;4.6398;4.5826;3.9266;3.8794;3.8248;3.7641;3.6016 -;+;-;-;-;-;-;-;-;- + 641 + 1 1.771 47197.6 1.0 4252 4552 8797 HBL1_DMSO_200M_050219_2,8806 HBL1_DMSO_200M_050219_2,8806,NYIEGTKML False False NYIEGTKML 47.830226 542.770861804485 3127426.0 8797.0 ENSG00000133313|ENST00000324262|CNDP2;;nc|ENSG00000133313|Q96KP4-2|CNDP2 7.062673727671306 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8807 47.836 301.0 367100.0 25 0 39105.0 -1 0 105 562.3080012279734 561.3007247613733 1 562.3088256716728 MULTI CID FTMS 0 0 0 8797 294702.5 0.5971612664316264 -1 0.1321563720703125 10 4 TT{I|L}EV 5 -1 + 62.823 0.0 0.0 11.192 11.192 95.876 0.0 0.0 0.0 13.87951510864768 11.462636538200158 11.462636538200158 11.462636538200158 0 1.4604093769761874 1.3979400086720375 0.7742275032520141 0.0 TT{I|L}EV;TT{I|L}D{I|L};{[QN]|[E{I|L}]|[KN]}TTV;[{I|L}T]TEV;{[DS]|[MA]|[CV]|TT}{I|L}EV;TTVE{I|L};[{I|L}T]ETV;{[DS]|[MA]|[CV]|TT}E{I|L}V;T{I|L}ETV;{[ET]|[MV]}{I|L}TV 11.192;9.1503;8.7197;8.3026;8.1709;7.8234;7.2494;6.3219;4.9102;4.3239 -;-;-;-;-;-;-;-;-;- 294 + 1 1.771 85394.7 1.0 4253 4552 8797 HBL1_DMSO_200M_050219_2,8807 HBL1_DMSO_200M_050219_2,8807, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8808 47.84 201.0 395300.0 25 0 53009.0 + 42329 VGHVMGSAL 9 103 435.72854992384055 869.4425469144811 2 435.7289306521416 MULTI CID FTMS 0 0 0 8797 293843.40625 0.6217838863687462 -1 0.1321563720703125 11 Carbamidomethyl (C) _VTAC(Carbamidomethyl (C))HVAL_ ENST00000440505.1_1_7:38351154-38351196:+|nuORF;ENSG00000250479|ENST00000484558|CHCHD10 49.66892048692302 0.1408045912742846 4 [HV]GMGSVA{I|L} 9 5 + 56.626 0.0 0.0 6.5129 6.5129 89.068 0.0 0.0 0.0 10.334237554869503 14.973024840566469 10.334237554869503 10.334237554869503 0 0.9247425010840048 1.0 1.1549471895720984 0.0 [HV]GMGSVA{I|L};[VG]HMGSVA{I|L};{[HG]|PP}VMGSVA{I|L};[HV]GVM[SG]A{I|L};[HV][MN]SVA{I|L};[HV]GMV[SG]A{I|L};[VG]HVM[SG]A{I|L};{[HG]|PP}VVM[SG]A{I|L};[HV]GVM{[QS]|[NT]}{I|L};{[HG]|PP}{[WT]|[RM]}SVA{I|L} 6.5129;5.3243;5.2857;5.0174;4.9294;4.8493;3.8288;3.7902;3.7575;3.7023 -;-;-;-;-;-;-;-;-;- 418 1 1.771 65227.0 1.0 4254 4552 8797 HBL1_DMSO_200M_050219_2,8808 HBL1_DMSO_200M_050219_2,8808,VTACHVAL False False VGHVMGSAL 47.839592 435.728930652142 3485167.75 8797.0 ENST00000440505.1_1_7:38351154-38351196:+|nuORF;;ENSG00000250479|ENST00000484558|CHCHD10 4.29729421933492 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8809 47.845 326.0 400380.0 25 0 38048.0 38668 TTLAADKL 8 135 416.7423374955306 831.4701220578612 2 416.7423889040947 MULTI CID FTMS 0 0 0 8797 282004.9375 0.3067820143218186 -2 0.1796493530273437 12 Unmodified _TTLAADKL_ ENSG00000176555|ENST00000319988|OR4S1 44.40701690623563 0.1655546087385432 4 WTT{I|L}AK 6 4 53.033 0.0 0.0 6.3782 0.0 0.0 0.0 128.07203088931877 128.07203088931877 20.348950402420265 0.0 0.0 0.0 0 1.25 0.0 0.0 0.2396518287104437 WTT{I|L}AK 6.3782 - 381 + 1 1.771 106997.3 1.0 4255 4552 8797 HBL1_DMSO_200M_050219_2,8809 HBL1_DMSO_200M_050219_2,8809,TTLAADKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8810 47.849 196.0 709020.0 25 0 54656.0 + 41169 VPCPPLRRV 9 111 346.2075584593151 1035.6008459781451 3 346.2074462771416 MULTI CID FTMS 0 0 0 8797 251191.96875 0.5676296284683722 -2 0.1796493530273437 13 Unmodified _VPCPPLRRV_ ENSG00000171763|ENST00000305560|SPATA5L1;nc|ENSG00000171763|Q9BVQ7-2|AFG2B;nc|ENSG00000171763|Q9BVQ7-3|AFG2B 31.26834338654808 0.1333407332142048 4 VPCV 4 5 45.987 0.0 0.0 4.4406 0.0 0.0 0.0 634.3804051012527 634.3804051012527 36.59008951604781 0.0 0.0 0.0 0 0.25 1.154901959985743 0.0 0.0 VPCV 4.4406 - 42 + 1 1.771 115278.8 1.0 4256 4552 8797 HBL1_DMSO_200M_050219_2,8810 HBL1_DMSO_200M_050219_2,8810,VPCPPLRRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8811 47.852 142.0 465260.0 25 0 50533.0 + -1 ATVTAMISV 9 94 454.7429579112785 907.471362889357 2 454.7445556521416 MULTI CID FTMS 0 0 0 8797 268227.4375 0.6184309065083512 1 -0.0900955200195312 14 Oxidation (M) _ATVTAM(Oxidation (M))ISV_ REV__ENST00000594017.5_1_19:49497156-49513425:+|nuORF 16.942295170755138 0.3780752226737986 4 SV 2 -1 26.013 0.0 0.0 2.8666 0.0 0.0 703.3600633061524 0.0 703.3600633061524 0.0 19.2693157241888 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 SV 2.8666 + + 137 + 1 1.771 57099.0 1.0 4257 4552 8797 HBL1_DMSO_200M_050219_2,8811 HBL1_DMSO_200M_050219_2,8811,ATVTAMISV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8812 47.856 181.0 469470.0 25 0 45991.0 27854 PLRLGEAL 8 97 434.76587112779487 867.5171893223898 2 434.7661926150322 MULTI CID FTMS 0 0 0 8797 214433.625 0.3595235216043904 12 -0.9758148193359376 15 Unmodified _PLRLGEAL_ ENST00000543587.5_3_11:71822512-71823788:-|nuORF;REV__ENST00000291906.4_1_9:131465114-131467624:+|nuORF 19.438996006549623 0.6237395211498085 4 {I|L}PP 3 7 45.49 0.0 0.0 5.2437 0.0 0.0 0.0 557.3056124322874 557.3056124322874 30.885540741363187 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}PP 5.2437 - 142 + 1 1.771 70297.8 1.0 4258 4552 8797 HBL1_DMSO_200M_050219_2,8812 HBL1_DMSO_200M_050219_2,8812,PLRLGEAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8813 47.861 274.0 347410.0 25 0 48027.0 + 40329 VHEPEPMI 8 123 476.2332702185826 950.4519875039653 2 476.2333251833916 MULTI CID FTMS 0 0 0 8797 193874.609375 1.0 0 0.0 16 Unmodified _VHEPEPMI_ REV__ENSG00000070748|ENST00000337653|CHAT;REV__nc|ENSG00000070748|P28329-2|CHAT;REV__nc|ENSG00000070748|P28329-3|CHAT 10.183394434864962 0.7604730176254005 4 MPVTHHVM 8 -1 + 31.604 0.0 0.0 3.3252 3.3252 74.509 0.0 0.0 0.0 14.63156532247897 3.3994806169435066 3.3994806169435066 9.030899869919438 0 0.0 0.0 0.0 0.0 MPVTHHVM;MPVTHHMV;MPV[PS]HH{M(Oxidation (M))|F} 3.3252;2.375;1.7345 -;-;- 285 + 1 1.771 77921.4 1.0 4259 4552 8797 HBL1_DMSO_200M_050219_2,8813 HBL1_DMSO_200M_050219_2,8813,VHEPEPMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8814 47.866 238.0 150620.0 25 0 14117.0 + -1 NQLYDMLMV 9 72 571.7638553158894 1141.5131576985789 2 571.7641479372978 MULTI CID FTMS 0 0 0 8797 154757.6875 1.0 0 0.0 17 Oxidation (M) _NQLYDMLM(Oxidation (M))V_ REV__ENSG00000106278|ENST00000393386|PTPRZ1;REV__nc|ENSG00000106278|P23471-2|PTPRZ1;REV__nc|ENSG00000106278|P23471-3|PTPRZ1 12.531546534597751 0.4974689918368763 4 HTV 3 -1 17.976 0.0 0.0 1.5748 0.0 0.0 786.3244197608818 0.0 786.3244197608818 0.0 4.87720313996633 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 HTV 1.5748 - 67 + 1 1.771 35263.4 1.0 4260 4552 8797 HBL1_DMSO_200M_050219_2,8814 HBL1_DMSO_200M_050219_2,8814,NQLYDMLMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8815 47.871 269.0 275500.0 25 0 14237.0 + 23 AAALIIHHV 9 111 472.7871992166677 943.5598455001356 2 472.7874633669853 MULTI CID FTMS 0 0 0 8797 150191.921875 0.8450369824663505 -1 0.1321563720703125 18 Unmodified _AAALIIHHV_ ENSG00000169375|ENST00000394947|SIN3A 67.41302359171755 0.0220989861905124 4 AAA{I|L}{I|L}{I|L}HHV 9 0 + 79.083 0.0 0.0 8.3814 8.3814 98.182 0.0 0.0 0.0 58.79291038956487 11.271211393095257 11.271211393095257 79.08336651773686 0 1.6643943297944483 1.5228787452803376 0.0 0.0 + + AAA{I|L}{I|L}{I|L}HHV 8.3814 + + 306 + 1 1.771 62869.5 1.0 4261 4552 8797 HBL1_DMSO_200M_050219_2,8815 HBL1_DMSO_200M_050219_2,8815,AAALIIHHV True True AAALIIHHV 47.871242 472.787463366985 1856806.375 8797.0 ENSG00000169375|ENST00000394947|SIN3A 9.436338106791178 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8816 47.885 800.0 173580.0 25 0 22448.0 + 13986 HYYDYPSIAH 10 117 633.2828626007969 1264.5511722683937 2 633.2840453982353 MULTI CID FTMS 0 0 0 8797 153980.640625 0.5806206800007824 -2 0.1796493530273437 19 Unmodified _HYYDYPSIAH_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 164.5152109175784 1.268313842594488e-06 4 HYYDY[PS]{I|L}AH 10 0 + 116.65 0.0 0.0 9.2244 9.2244 95.15 0.0 0.0 0.0 88.3181111849097 15.026975159433531 15.026975159433531 11.121381029421896 0 3.4698565171985374 1.6989700043360187 1.4604093769761874 0.0 + + HYYDY[PS]{I|L}AH;{[WN]|[YH]}YDY[PS]{I|L}AH;{[WN]|[YH]}DYY[PS]{I|L}AH;YYHDY[PS]{I|L}AH;YYDHY[PS]{I|L}AH;{[WN]|[YH]}YD[{I|L}A][{M(Oxidation (M))|F}E]AH;{[WN]|[YH]}DY[{I|L}A][{M(Oxidation (M))|F}E]AH;[YG]{[QD]|[EN]|[WG]|[KD]|[RS]}DY[PS]{I|L}AH;[PS]{[QC]|[C(Carbamidomethyl (C))A]}YY[PS]{I|L}AH;{[WN]|[YH]}YD[{I|L}A][PS]YH 9.2244;8.3449;7.7573;6.6412;6.3446;5.8329;5.2453;5.2064;4.9052;4.7198 +;+;-;-;-;-;-;-;-;- + 1210 + 1 1.771 107976.4 0.6600000262260437 4262 4552 8797 HBL1_DMSO_200M_050219_2,8816 HBL1_DMSO_200M_050219_2,8816,HYYDYPSIAH True True HYYDYPSIAH 47.885079 633.284045398235 7000509.5 8797.0 nc|ENSG00000150093|P05556-2|ITGB1;;nc|ENSG00000150093|P05556-4|ITGB1;;nc|ENSG00000150093|P05556-5|ITGB1;;ENSG00000150093|ENST00000302278|ITGB1;;nc|ENSG00000150093|P05556-3|ITGB1 8.572548071543375 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8817 47.899 800.0 94587.0 25 0 14903.0 -1 0 66 1091.1046303632224 3270.292061689868 3 1091.438281238079 MULTI CID FTMS 0 0 0 8797 133146.609375 0.7084035698742912 2 -0.1966361999511718 20 4 VTWD{I|L} 5 -1 21.16 0.0 0.0 0.64703 0.0 0.0 2382.8367527072487 270.1094149225219 2652.9461676297706 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 VTWD{I|L} 0.64703 - 393 + 1 1.771 66657.9 0.4699999988079071 4263 4552 8797 HBL1_DMSO_200M_050219_2,8817 HBL1_DMSO_200M_050219_2,8817, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8819 47.904 41.0 1156800.0 25 0 87468.0 + 25084 MPVTPQASV 9 92 465.2413778613167 928.4682027894336 2 465.2419616580009 MULTI CID FTMS 0 0 0 8818 1340794.125 0.9127225645315566 -1 0.0900955200195312 1 Unmodified _MPVTPQASV_ ENSG00000115825|ENST00000234179|PRKD3;ENST00000494667.5_1_2:37496701-37543667:-|nuORF;nc|ENSG00000115825|O94806-2|PRKD3 39.957323273325 0.0756908302845263 4 [QP]ASV[NG]ASV 10 6 + 33.862 0.0 0.0 3.647 3.647 71.204 0.0 0.0 0.0 7.474923971777049 7.650312510170778 7.474923971777049 4.758950235313858 0 0.8182503180159344 0.0 0.3807196863200844 0.4247425010840047 [QP]ASV[NG]ASV;[QP]AS[RN]ASV;[QP]ASV{[QN]|[E{I|L}]|[KN]}SV;{NN|[MP]|[D{I|L}]|[EV]}VT[QP]ASV;[VS]A[NG][QP]ASV;[VP]MT[QP]ASV;[QP]TGV[NG]ASV;[VP]TM[QP]ASV;[QP]AN{[QD]|[EN]|[WG]|[KD]|[RS]}ASV;{[SA]|[TG]}[RN][QP]ASV 3.647;3.1345;2.9435;2.842;2.7809;2.758;2.6744;2.5684;2.4002;2.3464 -;-;-;+;-;-;-;-;-;- + 347 1 1.781 43729.6 1.0 4264 4553 8818 HBL1_DMSO_200M_050219_2,8819 HBL1_DMSO_200M_050219_2,8819,MPVTPQASV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8820 47.906 84.0 567940.0 25 0 48709.0 + 29733 QPLQNVSTV 9 85 493.2692219437838 984.5238909543676 2 493.2695800662041 MULTI CID FTMS 0 0 0 8818 563712.125 0.5815396594140833 2 -0.2160987854003906 2 Unmodified _QPLQNVSTV_ nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1 28.486842064014134 0.1687311288560894 4 HHTV 4 7 23.232 0.0 0.0 2.3597 0.0 0.0 492.2710357862608 0.0 492.2710357862608 0.0 6.888793896675267 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 HHTV 2.3597 - 305 + 1 1.781 42071.2 1.0 4265 4553 8818 HBL1_DMSO_200M_050219_2,8820 HBL1_DMSO_200M_050219_2,8820,QPLQNVSTV False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 8821 47.908 98.0 567350.0 25 0 58358.0 + 25002 MPPPPPQGV 9 92 460.23852327962805 918.462493626056 2 460.2388488650322 MULTI CID FTMS 0 0 0 8818 556382.1875 0.0300227070178867 95 -7.656436920166016 3 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 67.03532852164291 0.0222449892513529 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 44.628 0.0 0.0 4.859 4.859 81.975 0.0 0.0 0.0 3.979400086720375 19.22167511924052 3.979400086720375 9.688105454342804 0 1.524227503252014 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;[NP]NPPPQR;{[HG]|PP}NNPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;[VG][EP]HPQR;[NP]PNPPQR;[NP]GGPPPQR;{[HG]|PP}NGGPPQR;{[HG]|PP}GGNPPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQGV 4.859;3.8041;3.6355;3.3234;3.0791;3.0431;2.7957;2.6271;2.6271;2.1647 -;-;-;+;-;-;-;-;-;- + 192 1 1.781 50821.8 1.0 4266 4553 8818 HBL1_DMSO_200M_050219_2,8821 HBL1_DMSO_200M_050219_2,8821,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8822 47.91 102.0 587360.0 25 0 37608.0 + 8260 EQIAEFKEA 9 93 532.766521062037 1063.518489190874 2 532.7678100466728 MULTI CID FTMS 0 0 0 8818 489093.375 0.8777498897133422 1 -0.1065406799316406 4 Unmodified _EQIAEFKEA_ ENSG00000143933|ENST00000272298|CALM2;ENSG00000160014|ENST00000291295|CALM3;ENSG00000198668|ENST00000356978|CALM1;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;ENST00000556757.5_1_14:90863574-90867886:+|nuORF;ENST00000597868.5_1_19:47104691-47111872:+|nuORF 29.84058131909904 0.1515068451768857 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AE{M(Oxidation (M))|F}QS{I|L} 9 3 + 39.192 0.0 0.0 3.6851 3.6851 64.124 0.0 0.0 0.0 5.604028237526755 0.6069784035361181 0.6069784035361181 0.6069784035361181 0 0.3807196863200844 0.0 0.8252574989159953 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AE{M(Oxidation (M))|F}QS{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AE{M(Oxidation (M))|F}QTV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}A{M(Oxidation (M))|F}AWS{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}A{M(Oxidation (M))|F}AWTV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AE{M(Oxidation (M))|F}{[TV]|[{I|L}S]}Q;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AE{M(Oxidation (M))|F}[AG]S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AE{M(Oxidation (M))|F}[AG]TV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AE{M(Oxidation (M))|F}{[TV]|[{I|L}S]}GA;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}A{M(Oxidation (M))|F}APA{M(Oxidation (M))|F}A;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AE[VS]A{M(Oxidation (M))|F}A 3.6851;3.6281;3.5754;3.5183;3.3258;2.8193;2.7622;2.6968;2.578;2.2481 -;-;-;-;-;-;-;-;-;- 654 + 1 1.781 53929.8 1.0 4267 4553 8818 HBL1_DMSO_200M_050219_2,8822 HBL1_DMSO_200M_050219_2,8822,EQIAEFKEA False True EQIAEFKEA 47.910134 532.767810046673 4923213.5 8818.0 ENSG00000160014|ENST00000291295|CALM3;;ENST00000556757.5_1_14:90863574-90867886:+|nuORF;;ENST00000555267.1_1_14:90866417-90870426:+|nuORF;;ENST00000597868.5_1_19:47104691-47111872:+|nuORF;;ENSG00000198668|ENST00000356978|CALM1;;ENSG00000143933|ENST00000272298|CALM2 5.569834073384603 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8823 47.913 152.0 463290.0 25 0 36327.0 + 30886 RIPEKVFQA 9 101 544.3168004176783 1086.6190479021566 2 544.3165771365166 MULTI CID FTMS 0 0 0 8818 328796.0625 0.6860274034768501 -3 0.269744873046875 5 Unmodified _RIPEKVFQA_ ENSG00000185414|ENST00000338148|MRPL30;ENSG00000241962|ENST00000424491|unknown;nc|ENSG00000185414|Q8TCC3-3|MRPL30 49.55428908609986 0.0413471690215031 4 [R{I|L}][EP]KV{M(Oxidation (M))|F} 7 2 40.564 0.0 0.0 3.7331 0.0 0.0 0.0 214.08353704819072 214.08353704819072 26.75205716106128 0.0 0.0 0.0 0 1.1307196863200843 1.0969100130080565 0.3807196863200844 0.0 + [R{I|L}][EP]KV{M(Oxidation (M))|F} 3.7331 + + 147 1 1.781 60127.1 1.0 4268 4553 8818 HBL1_DMSO_200M_050219_2,8823 HBL1_DMSO_200M_050219_2,8823,RIPEKVFQA True True RIPEKVFQA 47.913156 544.316577136517 11180740.0 8818.0 ENSG00000241962|ENST00000424491|unknown;;ENSG00000185414|ENST00000338148|MRPL30;;nc|ENSG00000185414|Q8TCC3-3|MRPL30 6.266795158386231 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8824 47.918 275.0 386340.0 25 0 24461.0 28286 PRLTYKTV 8 119 489.2925132183994 976.5704735035988 2 489.2926208376884 MULTI CID FTMS 0 0 0 8818 322477.1875 0.2206520180995351 3 -0.319732666015625 6 Unmodified _PRLTYKTV_ ENSG00000147416|ENST00000276390|ATP6V1B2;ENST00000523482.5_1_8:20054917-20070443:+|nuORF 39.957323273325 0.2350051964751539 4 [R{I|L}]PPP[TP]TV 9 6 + 64.962 0.0 0.0 6.6521 6.6521 89.743 0.0 0.0 0.0 18.52974763683696 49.38908619073706 18.52974763683696 11.00833760139686 0 1.524227503252014 1.0 1.0 0.2887254899964357 [R{I|L}]PPP[TP]TV;[R{I|L}]PPP{[VA]|[{I|L}G]}EV;[R{I|L}][YK][TP]TV;YV{I|L}{I|L}[RN]TV;YV{I|L}{I|L}[RN]S{I|L};[R{I|L}][YK]{[VA]|[{I|L}G]}EV;[R{I|L}]PP[{I|L}A][DP]V;[{M(Oxidation (M))|F}V]{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.6521;5.5248;3.6215;3.3557;2.6589;2.4943;2.2255;1.3278 -;-;-;-;-;-;-;- 325 1 1.781 84586.5 1.0 4269 4553 8818 HBL1_DMSO_200M_050219_2,8824 HBL1_DMSO_200M_050219_2,8824,PRLTYKTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8825 47.921 125.0 564720.0 25 0 49735.0 + 39219 TYVTPRRPF 9 77 379.5453070792246 1135.6140918378735 3 379.5452758669853 MULTI CID FTMS 0 0 0 8818 268773.78125 0.1686425709520442 5 -0.5134391784667969 7 Unmodified _TYVTPRRPF_ ENSG00000170889|ENST00000302907|RPS9;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 24.020572477871973 0.2255576514309169 4 TYV 3 6 48.94 0.0 0.0 4.3096 0.0 0.0 0.0 769.4114697105267 769.4114697105267 35.44531259372398 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 + TYV 4.3096 + + 74 + 1 1.781 64844.2 1.0 4270 4553 8818 HBL1_DMSO_200M_050219_2,8825 HBL1_DMSO_200M_050219_2,8825,TYVTPRRPF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8826 47.935 800.0 163790.0 25 0 8918.0 + 25128 MQDDNQVMV 9 170 556.2227801258406 1110.431007318481 2 556.2238036990166 MULTI CID FTMS 0 0 0 8818 228266.53125 1.0 0 0.0 8 2 Oxidation (M) _M(Oxidation (M))QDDNQVM(Oxidation (M))V_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 45.69961567697781 0.0497987121815769 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DDNQV{M(Oxidation (M))|F}V 9 0 + 33.849 0.0 0.0 3.0483 3.0483 62.561 0.0 0.0 0.0 0.6817302081888954 2.130885690632184 0.6817302081888954 0.6817302081888954 0 0.8892494821072345 0.0 0.0 0.9604093769761876 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DDNQV{M(Oxidation (M))|F}V;[TA]CDDNQV{M(Oxidation (M))|F}V;[YT]VQNDDC(Carbamidomethyl (C))P;[YT]VQNDDCGP;{[ET]|[MV]}C(Carbamidomethyl (C))DNQV{M(Oxidation (M))|F}V;[YT]VQNDC(Carbamidomethyl (C))DP;[YT]VQ{M(Oxidation (M))|F}DS[HD];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DDGGQV{M(Oxidation (M))|F}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DDN[AG]V{M(Oxidation (M))|F}V;[TA]CDDN[AG]V{M(Oxidation (M))|F}V 3.0483;2.9869;2.8564;2.6836;2.6186;2.4267;2.3537;2.219;2.219;2.1615 +;-;-;-;-;-;-;-;-;- + 680 1 1.781 103394.1 0.9200000166893004 4271 4553 8818 HBL1_DMSO_200M_050219_2,8826 HBL1_DMSO_200M_050219_2,8826,MQDDNQVMV True False MQDDNQVMV 47.934619 556.223803699017 1640099.75 8818.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 6.270683765411377 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8827 47.948 800.0 135860.0 25 0 10136.0 + 26469 NTISPSSFDDM 11 126 607.2539416215275 1212.4933303098549 2 607.2547485232353 MULTI CID FTMS 0 0 0 8818 164635.15625 1.0 0 0.0 9 Unmodified _NTISPSSFDDM_ REV__ENSG00000100031|ENST00000400382|GGT1;REV__ENST00000490087.1_1_22:25023855-25024219:+|nuORF;REV__nc|ENSG00000100031|P19440-3|GGT1;REV__nc|ENSG00000197421|A6NGU5|GGT3P 33.4449034751529 0.3133739643825231 4 {[QS]|[NT]}{I|L}DR{I|L} 6 -1 45.181 0.0 0.0 3.7263 0.0 0.0 0.0 497.0824776089361 497.0824776089361 25.46597803923873 0.0 0.0 0.0 0 1.8182503180159344 0.9208187539523752 0.5356668758921829 0.6747425010840047 {[QS]|[NT]}{I|L}DR{I|L} 3.7263 - 620 1 1.781 86427.4 0.7599999904632568 4272 4553 8818 HBL1_DMSO_200M_050219_2,8827 HBL1_DMSO_200M_050219_2,8827,NTISPSSFDDM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8828 47.954 333.0 397320.0 25 0 65697.0 + 24390 MFPEHAVKAY 10 136 398.1988416358539 1191.5746955077618 3 398.1990539431572 MULTI CID FTMS 0 0 0 8818 130900.078125 0.2583204665503625 -5 0.43865966796875 10 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 22.736283301280096 0.4578556481593033 4 {[YD]|[{M(Oxidation (M))|F}M]}[EP]HAVKAY 10 0 + 31.476 0.0 0.0 2.6415 2.6415 78.82 0.0 0.0 0.0 15.991079038269334 10.784182298814711 10.784182298814711 31.47562910330961 0 0.2302046884880938 1.2218487496163564 0.0 0.0 + + {[YD]|[{M(Oxidation (M))|F}M]}[EP]HAVKAY 2.6415 + + 206 + 1 1.781 106627.4 1.0 4273 4553 8818 HBL1_DMSO_200M_050219_2,8828 HBL1_DMSO_200M_050219_2,8828,MFPEHAVKAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8829 47.968 800.0 166640.0 25 0 22390.0 + 39221 TYVTPRRPF 9 140 568.8132453627392 1135.6119377922782 2 568.8151122927666 MULTI CID FTMS 0 0 0 8818 126026.765625 0.2008177252124197 5 -0.5134391784667969 11 Unmodified _TYVTPRRPF_ ENSG00000170889|ENST00000302907|RPS9;ENST00000460761.1_1_19:54705052-54705521:+|nuORF 14.838274106304384 0.4350285940865338 4 [YT]V 3 6 25.735 0.0 0.0 2.2662 0.0 0.0 0.0 769.4106187827657 769.4106187827657 -1.4369106141933763 0.0 -1.4369106141933763 0.0 0 0.3494850021680094 2.0 0.0 0.0 + [YT]V 2.2662 + + 378 1 1.781 103019.1 0.6800000071525574 4274 4553 8818 HBL1_DMSO_200M_050219_2,8829 HBL1_DMSO_200M_050219_2,8829,TYVTPRRPF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8830 47.977 468.0 216280.0 25 0 22170.0 -1 SVVKHPCL 8 147 470.25942187801616 0 470.2618896365166 PEAK CID FTMS 0 0 0 8818 119422.84375 0.8236906733064311 -1 0.0900955200195312 12 Carbamidomethyl (C) _SVVKHPC(Carbamidomethyl (C))L_ ENST00000449600.1_1_2:110936461-110959062:-|nuORF 18.13498045792455 0.4501116112875982 4 D 1 -1 7.744 0.0 0.0 0.82514 0.0 0.0 752.4035350628699 68.05134760074452 820.4548826636144 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.1022338482433752 0.0 D 0.82514 - 85 + 1 1.781 80130.1 1.0 4275 4553 8818 HBL1_DMSO_200M_050219_2,8830 HBL1_DMSO_200M_050219_2,8830,SVVKHPCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8831 47.992 800.0 59310.0 25 0 3581.5 + -1 HYYDQEKKRYW 11 82 829.3920612589861 1656.7695695847722 2 829.3933593630791 MULTI CID FTMS 0 0 0 8818 110596.0078125 1.0 0 0.0 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))HYYDQEKKRYW_ REV__ENST00000552265.2_1_12:111822376-111823062:+|nuORF 0.0 0.8751479354844584 4 QGA{[C(Carbamidomethyl (C))G]|[NC]}A 6 -1 33.461 0.0 0.0 2.0196 0.0 0.0 355.1847336122217 754.3567598932249 1109.5414935054466 0.0 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.4247425010840047 QGA{[C(Carbamidomethyl (C))G]|[NC]}A 2.0196 - 341 + 1 1.781 38580.3 0.5400000214576721 4276 4553 8818 HBL1_DMSO_200M_050219_2,8831 HBL1_DMSO_200M_050219_2,8831,HYYDQEKKRYW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8832 47.996 208.0 316740.0 25 0 40240.0 40336 VHLFLLLP 8 101 476.3051682407424 0 476.3047363162041 PEAK CID FTMS 0 0 0 8818 112132.8828125 0.9456385652155838 1 -0.1065406799316406 14 Unmodified _VHLFLLLP_ ENST00000507297.5_1_5:138860690-138860894:-|nuORF 2.889219685676258 0.5898224805723975 4 PV{M(Oxidation (M))|F} 3 7 12.307 0.0 0.0 1.2947 0.0 0.0 131.18582368675987 473.2032564752563 604.3890801620162 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PV{M(Oxidation (M))|F} 1.2947 - 79 + 1 1.781 56071.4 1.0 4277 4553 8818 HBL1_DMSO_200M_050219_2,8832 HBL1_DMSO_200M_050219_2,8832,VHLFLLLP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8833 48.0 226.0 264550.0 25 0 22855.0 + + 16651 SVIQTVNHV 9 114 499.2493548004234 996.4841566676467 2 499.2480956912041 MULTI CID FTMS 0 0 0 8818 93503.3984375 0.8283381426368862 1 -0.1065406799316406 15 Unmodified _KELEENHV_ ENSG00000070444|ENST00000174618|MNT 19.438996006549623 0.6237395211498085 4 {[WN]|[YH]}Q{[TV]|[{I|L}S]}NHV 8 -1 + 20.908 0.0 0.0 2.0981 2.0981 74.363 0.0 0.0 0.0 -2.4580987676330395 10.422969584511677 -2.4580987676330395 9.262137858390812 0 0.0 0.0 0.0 0.3494850021680094 {[WN]|[YH]}Q{[TV]|[{I|L}S]}NHV;{[WN]|[YH]}[AG]{[TV]|[{I|L}S]}NHV;{[WN]|[YH]}Q{[TV]|[{I|L}S]}GGHV;{[WN]|[YH]}VV{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV 2.0981;1.1686;0.81793;0.81547 -;-;-;- 172 + 1 1.781 53507.7 1.0 4278 4553 8818 HBL1_DMSO_200M_050219_2,8833 HBL1_DMSO_200M_050219_2,8833,KELEENHV False False SVIQTVNHV 48.000116 499.248095691204 937626.1875 8818.0 ENSG00000070444|ENST00000174618|MNT 5.985460678736369 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8834 48.006 296.0 606280.0 25 0 39659.0 + 15261 IPHIHKSLI 9 145 529.3293868402865 1056.6442207473729 2 529.3283569216728 MULTI CID FTMS 0 0 0 8818 85430.6015625 0.0436339174642656 -3 0.269744873046875 16 Unmodified _IPHIHKSLI_ chr7:44834562-44835643|14|15.29|0.2|6.28|-|2|H2AZ2,None|2;ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-3|H2AZ2;nc|ENSG00000105968|Q71UI9-4|H2AZ2 96.36657018975838 0.0123932121270252 4 {I|L}PH{I|L}HKS{I|L}{I|L} 9 0 + 93.855 0.0 0.0 8.8824 8.8824 85.176 0.0 0.0 0.0 44.23448883558071 13.46787486224656 13.46787486224656 3.0102999566398125 0 2.274227503252014 1.3979400086720375 1.0994850021680094 0.0 + + {I|L}PH{I|L}HKS{I|L}{I|L};{I|L}P{I|L}HHKS{I|L}{I|L};{I|L}PH{I|L}HK{I|L}S{I|L};{I|L}PH{I|L}HKVT{I|L};{I|L}P{I|L}HHK{I|L}S{I|L};{I|L}P{I|L}HHKVT{I|L};{I|L}PH{I|L}HK{I|L}TV;{I|L}P{I|L}HHK{I|L}TV;{I|L}{I|L}PHHKS{I|L}{I|L};{I|L}{I|L}PHHK{I|L}S{I|L} 8.8824;8.5975;8.4641;8.3134;8.1792;8.0285;7.5472;7.2623;7.2044;6.7861 +;-;-;-;-;-;-;-;-;- + 2801 + 1 1.781 141379.3 1.0 4279 4553 8818 HBL1_DMSO_200M_050219_2,8834 HBL1_DMSO_200M_050219_2,8834,IPHIHKSLI True True IPHIHKSLI 48.005545 529.328356921673 131463679.0 8818.0 nc|ENSG00000105968|Q71UI9-4|H2AZ2;;nc|ENSG00000105968|Q71UI9-3|H2AZ2;;chr7:44834562-44835643|14|15.29|0.2|6.28|-|2|H2AZ2,None|2;;ENSG00000105968|ENST00000308153|H2AZ2;;ENSG00000164032|ENST00000296417|H2AZ1;;ENST00000511319.5_1_4:100869621-100871200:-|nuORF 3.868494908014933 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8836 48.01 19.0 2613900.0 25 0 489430.0 + 15714 IQVTKVTQV 9 84 508.31086889001136 1014.6071848468227 2 508.3112365603447 MULTI CID FTMS 0 0 0 8835 2790406.25 0.5523302766930169 1 -0.10955810546875 1 Unmodified _IQVTKVTQV_ ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1 53.832793166522166 0.0319663582346103 4 [Q{I|L}]SKTVVQ{I|L} 9 5 + 59.612 0.0 0.0 5.8754 5.8754 76.686 0.0 0.0 0.0 2.919562702124452 16.478174818886373 2.919562702124452 2.919562702124452 0 0.5 1.0969100130080565 0.3807196863200844 0.805462187404089 [Q{I|L}]SKTVVQ{I|L};[KT]VVTQVQ{I|L};[Q{I|L}]SKTVV[AG]{I|L};[KT]VVT[AG]VQ{I|L};[KT]VVTQV[AG]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}TKTVVQ{I|L};[KT]VQTVVQ{I|L};[KT]VVT[AG]V[AG]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}TKTVV[AG]{I|L};[QT]VKTVVQ{I|L} 5.8754;5.5876;4.9678;4.6801;4.6801;4.3202;3.8828;3.7768;3.4126;3.1159 -;-;-;-;-;-;-;-;-;- 494 1 1.792 43584.2 1.0 4280 4554 8835 HBL1_DMSO_200M_050219_2,8836 HBL1_DMSO_200M_050219_2,8836,IQVTKVTQV True True IQVTKVTQV 48.010239 508.311236560345 69098152.0 8835.0 nc|ENSG00000095139|P48444-2|ARCN1;;ENSG00000095139|ENST00000264028|ARCN1 5.487215360005696 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8837 48.013 131.0 413320.0 25 0 40546.0 35912 SVNSVLSV 8 82 402.7274376081221 803.4403222830442 2 402.7266723513603 MULTI CID FTMS 0 0 0 8835 214888.0 0.0834264848457848 4 -0.4068984985351562 2 Unmodified _SVNSVLSV_ ENST00000427501.5_1_6:86387567-86387600:-|nuORF 18.13498045792455 0.6430038125133779 4 DHV 3 7 19.922 0.0 0.0 2.4795 0.0 0.0 434.2763646187848 0.0 434.2763646187848 0.0 9.08406962089859 0.0 0.0 0 0.0 0.0 0.0 0.0 DHV 2.4795 - 70 + 1 1.792 47766.4 1.0 4281 4554 8835 HBL1_DMSO_200M_050219_2,8837 HBL1_DMSO_200M_050219_2,8837,SVNSVLSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8838 48.014 23.0 3290200.0 25 0 697710.0 + 15262 IPHIHKSLI 9 107 353.2221878238477 1056.6447340717432 3 353.2219116091728 MULTI CID FTMS 0 0 0 8835 2069802.25 0.2651025721568955 -2 0.1966361999511718 3 Unmodified _IPHIHKSLI_ chr7:44834562-44835643|14|15.29|0.2|6.28|-|2|H2AZ2,None|2;ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-3|H2AZ2;nc|ENSG00000105968|Q71UI9-4|H2AZ2 36.506200033944 0.094635877243972 4 {I|L}PH{I|L}H[KS]{I|L}{I|L} 9 0 + 63.659 0.0 0.0 6.0247 6.0247 83.193 0.0 0.0 0.0 29.950361155247265 12.208859094697573 12.208859094697573 7.257724967479845 0 0.9489700043360187 0.744727494896694 0.6421590589602533 0.0 + + {I|L}PH{I|L}H[KS]{I|L}{I|L};{I|L}PH{I|L}H{I|L}[KS]{I|L} 6.0247;5.3378 +;- + 505 + 1 1.792 67924.7 1.0 4282 4554 8835 HBL1_DMSO_200M_050219_2,8838 HBL1_DMSO_200M_050219_2,8838,IPHIHKSLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8839 48.015 36.0 1620300.0 25 0 171470.0 + 20885 LMPTGLPEL 9 89 485.7687766167918 0 485.7643005251884 PEAK CID FTMS 0 0 0 8835 1462460.875 0.5992872388868941 -1 0.1065406799316406 4 Unmodified _LMPTGLPEL_ REV__ENSG00000148200|ENST00000487099|NR6A1;REV__nc|ENSG00000148200|Q15406-2|NR6A1;REV__nc|ENSG00000148200|Q15406-3|NR6A1;REV__nc|ENSG00000148200|Q15406-4|NR6A1;REV__nc|ENSG00000148200|Q15406-5|NR6A1 23.1484247019978 0.1725298825155634 4 {I|L}SQVVP 6 -1 28.237 0.0 0.0 2.9125 0.0 0.0 147.0627853139285 196.0733126276 343.13609794152853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}SQVVP 2.9125 - 138 + 1 1.792 51833.1 1.0 4283 4554 8835 HBL1_DMSO_200M_050219_2,8839 HBL1_DMSO_200M_050219_2,8839,LMPTGLPEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8840 48.018 133.0 606630.0 25 0 75418.0 + 26822 PAPPPPQPL 9 94 457.2606688128342 912.5067846924684 2 457.2606689333916 MULTI CID FTMS 0 0 0 8835 454772.25 0.5310669551726537 8 -0.6783638000488281 5 Unmodified _PAPPPPQPL_ ENST00000317173.8_1_8:9911977-10102635:+|nuORF;ENST00000441698.6_1_8:9911977-10065409:+|nuORF 81.86404211737425 0.017065112157077 4 [PA]PPPP[QP]{I|L} 9 0 + 71.666 0.0 0.0 7.8537 7.8537 90.261 0.0 0.0 0.0 57.06153761089837 3.161064762674144 3.161064762674144 8.893017025063102 0 2.305462187404089 2.0 0.0 0.6549471895720984 + + [PA]PPPP[QP]{I|L};[PA]PPPP[Q{I|L}]P;[PA][YK]P[QP]{I|L};[PA]PP[K{I|L}]QY;[PA]P[YK][QP]{I|L};[PA]PP[KS]{[VA]|[{I|L}G]}{M(Oxidation (M))|F};[PA]PP[K{I|L}][SG]{M(Oxidation (M))|F};[PA][YK]P[Q{I|L}]P;[PA]PP[K{I|L}][AG]Y;[PA]P[YK][Q{I|L}]P 7.8537;6.8791;4.7787;4.7388;4.648;4.6305;4.2138;3.8041;3.7238;3.6734 +;-;-;-;-;-;-;-;-;- + 480 + 1 1.792 68142.1 1.0 4284 4554 8835 HBL1_DMSO_200M_050219_2,8840 HBL1_DMSO_200M_050219_2,8840,PAPPPPQPL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8841 48.02 114.0 415890.0 25 0 19459.0 -1 NMVAKVDEV 9 94 510.7554934593428 1019.4964339854856 2 510.7553283572197 MULTI CID FTMS 0 0 0 8835 357567.90625 0.71976869366788 -1 0.1065406799316406 6 Oxidation (M) _NM(Oxidation (M))VAKVDEV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 38.17557092003332 0.0854718145212029 4 GAVDV{M(Oxidation (M))|F}V{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 43.286 0.0 0.0 4.2459 0.0 0.0 71.07427413154453 0.0 71.07427413154453 0.0 23.71706678572556 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.0 GAVDV{M(Oxidation (M))|F}V{[QD]|[EN]|[WG]|[KD]|[RS]} 4.2459 - 328 1 1.792 40963.1 1.0 4285 4554 8835 HBL1_DMSO_200M_050219_2,8841 HBL1_DMSO_200M_050219_2,8841,NMVAKVDEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8842 48.025 250.0 304380.0 25 0 38081.0 + 36858 TELSTGVL 8 126 410.22663698678633 818.4387210403727 2 410.2263976931572 MULTI CID FTMS 0 0 0 8835 264977.9375 1.0 0 0.0 7 Unmodified _TELSTGVL_ REV__nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1 19.438996006549623 0.6237395211498085 4 {[QN]|[E{I|L}]|[KN]}SKTE{I|L} 7 -1 + 18.689 0.0 0.0 2.2835 2.2835 62.518 0.0 0.0 0.0 2.5006738633765764 3.204482088348115 2.5006738633765764 1.2590157675489806 0 0.3182503180159344 0.0 0.7302046884880938 0.0 {[QN]|[E{I|L}]|[KN]}SKTE{I|L};{[QN]|[E{I|L}]|[KN]}TSKE{I|L};[KS]ET{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}TT{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}TE{I|L};[KS]E{I|L}TE{I|L};{[ES]|[DT]|[{I|L}C]}KT{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}STKE{I|L};{[ES]|[DT]|[{I|L}C]}K{I|L}TE{I|L};{[ET]|[MV]}VKTE{I|L} 2.2835;2.1297;1.978;1.978;1.9693;1.9693;1.8253;1.8189;1.8167;1.6624 -;-;-;-;-;-;-;-;-;- 253 1 1.792 62816.7 1.0 4286 4554 8835 HBL1_DMSO_200M_050219_2,8842 HBL1_DMSO_200M_050219_2,8842,TELSTGVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8843 48.03 298.0 467050.0 25 0 44279.0 -1 0 149 336.72370785458367 671.4328627759674 2 336.7234680056572 MULTI CID FTMS 0 0 0 8835 198295.359375 1.0 0 0.0 8 4 A{I|L}TR{I|L}V 6 -1 + 50.684 0.0 0.0 7.5487 7.5487 95.859 0.0 0.0 0.0 39.97093142085326 0.6791844926121371 0.6791844926121371 42.99926291259104 0 0.6861818737241735 2.0 0.0 0.0 A{I|L}TR{I|L}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}A{I|L}V 7.5487;1.1446 -;- 57 + 1 1.792 109693.1 1.0 4287 4554 8835 HBL1_DMSO_200M_050219_2,8843 HBL1_DMSO_200M_050219_2,8843, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8844 48.039 510.0 229190.0 25 0 40066.0 -1 0 79 966.4323678807548 1930.8501828283097 2 966.4310790896416 MULTI CID FTMS 0 0 0 8835 181882.296875 0.1271618059887574 14 -1.0650482177734375 9 4 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L} 6 -1 24.445 0.0 0.0 1.266 0.0 0.0 0.0 1301.4881549757904 1301.4881549757904 4.037401165353202 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.6109243748081782 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L} 1.266 - 399 1 1.792 85085.6 1.0 4288 4554 8835 HBL1_DMSO_200M_050219_2,8844 HBL1_DMSO_200M_050219_2,8844, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8845 48.046 380.0 222010.0 25 0 15495.0 -1 MQDDNQVMV 9 139 548.2253860739132 1094.4362192146264 2 548.2262451052666 MULTI CID FTMS 0 0 0 8835 170682.125 0.4379847895329405 1 -0.10955810546875 10 Oxidation (M) _MQDDNQVM(Oxidation (M))V_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 24.99096001346401 0.2132109383330889 4 {[QN]|[E{I|L}]|[KN]}DDMQV[{M(Oxidation (M))|F}V] 9 -1 + 39.505 0.0 0.0 3.6096 3.6096 69.695 0.0 0.0 0.0 8.084479140532999 27.722026911609834 8.084479140532999 3.679767852945943 0 0.7396518287104438 1.5228787452803376 0.0 0.930884548956689 {[QN]|[E{I|L}]|[KN]}DDMQV[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DDVC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DDM[AG]V[{M(Oxidation (M))|F}V];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDNQV[{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}DNMQV[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DDV[CG]V[{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}MDNQV[{M(Oxidation (M))|F}V];{[QD]|[EN]|[WG]|[KD]|[RS]}DNVC(Carbamidomethyl (C))V[{M(Oxidation (M))|F}V];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDGGQV[{M(Oxidation (M))|F}V];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDN[AG]V[{M(Oxidation (M))|F}V] 3.6096;3.2734;2.7682;2.7177;2.5321;2.432;2.2984;2.1958;1.8763;1.8763 -;-;-;+;-;-;-;-;-;- + 772 1 1.792 69024.3 1.0 4289 4554 8835 HBL1_DMSO_200M_050219_2,8845 HBL1_DMSO_200M_050219_2,8845,MQDDNQVMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8846 48.058 702.0 423310.0 25 0 31766.0 + 4050 DALVLHKV 8 200 447.7736604922732 893.5327680513464 2 447.7743713259697 MULTI CID FTMS 0 0 0 8835 145224.796875 0.192548931785327 -2 0.1966361999511718 11 Unmodified _DALVLHKV_ ENSG00000163939|ENST00000707071|PBRM1;ENST00000480064.1_1_3:52643285-52649409:-|nuORF;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 37.97399986684836 0.2681860861828418 4 DA{I|L}V{I|L}HVK 8 2 + 78.719 0.0 0.0 8.8099 8.8099 79.476 0.0 0.0 0.0 32.22121925385488 0.1003560525316515 0.1003560525316515 0.1003560525316515 0 1.1549471895720984 1.6989700043360187 0.0 0.1985636147643344 DA{I|L}V{I|L}HVK;DA{I|L}V{I|L}HKV;DAV{I|L}{I|L}HVK;DAV{I|L}{I|L}HKV;V{[CP]|[EA]}V{I|L}HVK;V{[CP]|[EA]}V{I|L}HKV;V{[DA]|[EG]}{I|L}{I|L}HVK;V{[DA]|[EG]}{I|L}{I|L}HKV 8.8099;8.7987;7.4681;7.4568;4.3839;4.3727;3.0421;3.0308 -;+;-;-;-;-;-;- + 509 + 1 1.792 227281.6 1.0 4290 4554 8835 HBL1_DMSO_200M_050219_2,8846 HBL1_DMSO_200M_050219_2,8846,DALVLHKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8847 48.063 215.0 417250.0 25 0 24056.0 + 26369 NSYVSPRI 8 124 468.2508449790174 934.4871370248349 2 468.2513915896416 MULTI CID FTMS 0 0 0 8835 145205.1875 0.0846516380884075 -4 0.3762855529785156 12 Unmodified _NSYVSPRI_ ENSG00000136536|ENST00000409175|MARCHF7;nc|ENSG00000136536|Q9H992-2|MARCHF7 58.6788170122104 0.1149141431586871 4 [NS]YVS[RP]{I|L} 8 0 + 55.328 0.0 0.0 5.9206 5.9206 86.931 0.0 0.0 0.0 43.10911268361153 8.3771376077312 8.3771376077312 10.924778212679485 0 0.9247425010840048 1.6989700043360187 0.0 0.6237125054200234 + + [NS]YVS[RP]{I|L};[NS]{I|L}KKC(Carbamidomethyl (C))SV;[NS]{I|L}KKN[MT];[NS]Y{I|L}[RP]SV;[NS]{I|L}KK[CG]SV;[NS]{I|L}KK[KC]D;[NS]{I|L}KK[CS]GV;[NS]{I|L}Y[RP]SV;[NS]{I|L}KKGG[MT];[NS][KG]V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GV 5.9206;4.7516;4.402;4.022;3.7604;3.7104;3.3262;3.1648;3.1019;1.4794 +;-;-;-;-;-;-;-;-;- + 364 + 1 1.792 71934.1 1.0 4291 4554 8835 HBL1_DMSO_200M_050219_2,8847 HBL1_DMSO_200M_050219_2,8847,NSYVSPRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8848 48.07 392.0 148660.0 25 0 18333.0 + -1 GRCYCECV 8 113 552.2067355424032 1102.3989181516065 2 552.2070800662041 MULTI CID FTMS 0 0 0 8835 143098.0625 0.6853445234144215 1 -0.10955810546875 13 3 Carbamidomethyl (C) _GRC(Carbamidomethyl (C))YC(Carbamidomethyl (C))EC(Carbamidomethyl (C))V_ REV__ENST00000261590.12_1_18:29116258-29116342:+|nuORF 9.347437153973935 0.7675937258251505 4 MV 2 -1 16.325 0.0 0.0 1.4809 0.0 0.0 854.2790126113704 0.0 854.2790126113704 0.0 0.6512165466114794 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 MV 1.4809 - 105 + 1 1.792 54955.2 1.0 4292 4554 8835 HBL1_DMSO_200M_050219_2,8848 HBL1_DMSO_200M_050219_2,8848,GRCYCECV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8849 48.075 224.0 353290.0 25 0 23946.0 35746 SVIEAHEQL 9 130 513.2665806606868 0 513.2670776247978 PEAK CID FTMS 0 0 0 8835 135993.515625 0.7228306447634552 1 -0.10955810546875 14 Unmodified _SVIEAHEQL_ ENSG00000101052|ENST00000373030|IFT52 27.628801355627647 0.1319135480000405 4 {I|L}EKMHE 6 6 22.644 0.0 0.0 2.2102 0.0 0.0 186.1007749914923 68.05136285953358 254.15213785102588 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.4247425010840047 {I|L}EKMHE 2.2102 - 449 + 1 1.792 66499.4 1.0 4293 4554 8835 HBL1_DMSO_200M_050219_2,8849 HBL1_DMSO_200M_050219_2,8849,SVIEAHEQL False True GVVEGDYRM 48.074989 513.267077624798 1030811.375 8835.0 ENSG00000125124|ENST00000245157|BBS2;;ENST00000561951.5_1_16:56535647-56545169:-|nuORF;;ENST00000569342.5_1_16:56536573-56553774:-|nuORF;;ENST00000565781.5_1_16:56536573-56553907:-|nuORF 4.11897087097168 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8850 48.089 800.0 152000.0 25 0 16556.0 + -1 SLKEHMEFLQ 10 122 639.3113466746042 1276.6081404160084 2 639.3098632693291 MULTI CID FTMS 0 0 0 8835 120532.3359375 0.4887979531247366 -9 0.8627166748046875 15 Oxidation (M) _SLKEHM(Oxidation (M))EFLQ_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 53.832793166522166 0.0576554960245129 4 {NN|[MP]|[D{I|L}]|[EV]}ADGARDG{M(Oxidation (M))|F}{I|L}Q 12 -1 + 74.483 0.0 0.0 5.8344 5.8344 75.17 0.0 0.0 0.0 14.58166256570955 9.098233696509126 9.098233696509126 2.0078197732981806 0 2.6237125054200234 1.3010299956639813 0.3054621874040891 0.9361818737241736 {NN|[MP]|[D{I|L}]|[EV]}ADGARDG{M(Oxidation (M))|F}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}A[R{M(Oxidation (M))|F}]NDW{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}A[R{M(Oxidation (M))|F}]NDAD{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}ADG[WR]G{M(Oxidation (M))|F}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}A[NG]D{I|L}DG{M(Oxidation (M))|F}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}A[R{M(Oxidation (M))|F}]NWD{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}ADG[DN]{I|L}G{M(Oxidation (M))|F}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}A[R{M(Oxidation (M))|F}]NEGD{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}A[NG]DD{I|L}G{M(Oxidation (M))|F}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}ADGAR{M(Oxidation (M))|F}GD{I|L}Q 5.8344;5.6771;5.6447;5.4409;5.4196;5.4064;5.3493;5.312;5.1838;5.0821 -;-;-;-;-;-;-;-;-;- 9563 1 1.792 98635.2 0.5899999737739563 4294 4554 8835 HBL1_DMSO_200M_050219_2,8850 HBL1_DMSO_200M_050219_2,8850,SLKEHMEFLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8851 48.094 291.0 264900.0 25 0 26913.0 + + 24173 IYTSSVNRL 9 92 526.7950820074403 1051.5756110816806 2 526.7913085818291 MULTI CID FTMS 0 0 0 8835 114403.328125 0.1829458207680842 -7 0.639923095703125 16 Unmodified _LYTVNMAIK_ ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2 19.256988751693697 0.3154191944385105 4 {I|L}YTSSV[RN]{I|L} 9 -1 + 72.062 0.0 0.0 6.8527 6.8527 90.84 0.0 0.0 0.0 46.11941264025134 5.915149811213496 5.915149811213496 11.989700043360187 0 0.5 2.0 0.5 0.0 {I|L}YTSSV[RN]{I|L};{I|L}YTS[{I|L}P]{I|L}{M(Oxidation (M))|F}V;{I|L}Y{I|L}{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}V;{I|L}Y{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[RN]{I|L};{I|L}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[RN]{I|L};[Y{I|L}]T[{I|L}P]S[{M(Oxidation (M))|F}V]{I|L};[Y{I|L}]T[{I|L}P][W{M(Oxidation (M))|F}]{I|L};[YT]{I|L}[{I|L}P]S[{M(Oxidation (M))|F}V]{I|L};[YT]{I|L}[{I|L}P][W{M(Oxidation (M))|F}]{I|L} 6.8527;5.7126;5.2857;4.4536;4.2644;4.1236;3.983;2.7406;2.6001 -;-;-;-;-;-;-;-;- 203 + 1 1.792 64737.4 1.0 4295 4554 8835 HBL1_DMSO_200M_050219_2,8851 HBL1_DMSO_200M_050219_2,8851,LYTVNMAIK False False IYTSSVNRL 48.09417 526.791308581829 1199913.125 8835.0 ENSG00000184432|ENST00000333188|COPB2;;nc|ENSG00000184432|P35606-2|COPB2 4.195793628692627 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8852 48.108 800.0 189040.0 25 0 11693.0 34269 SLQNLRLSL 9 177 522.3134041557215 1042.612255378243 2 522.3146240115166 MULTI CID FTMS 0 0 0 8835 95776.4140625 0.2362718361083377 3 -0.3231163024902344 17 Unmodified _SLQNLRLSL_ ENST00000472718.5_1_3:47844667-47846906:+|nuORF 19.256988751693697 0.3154191944385105 4 M 1 9 13.979 0.0 0.0 1.3408 0.0 0.0 893.5606786954289 0.0 893.5606786954289 0.0 -0.5385885787473672 -0.5385885787473672 0.0 0 0.0 0.0 0.0 0.0 M 1.3408 - 1040 + 1 1.792 120272.4 0.5199999809265137 4296 4554 8835 HBL1_DMSO_200M_050219_2,8852 HBL1_DMSO_200M_050219_2,8852,SLQNLRLSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8853 48.115 328.0 320570.0 25 0 42953.0 + 12532 GVGPIRDV 8 126 406.7347615006252 811.4549700680503 2 406.7348205447197 MULTI CID FTMS 0 0 0 8835 99370.1171875 0.4388873507140344 -2 0.1966361999511718 18 Unmodified _GVGPIRDV_ ENSG00000170043|ENST00000303731|TRAPPC1 27.628801355627647 0.4629596117395134 4 RGP{I|L}SET 7 5 53.682 0.0 0.0 6.6155 0.0 0.0 0.0 68.05136285953358 68.05136285953358 39.80815249957795 0.0 0.0 0.0 0 0.9876954943324544 0.0 0.3494850021680094 0.0 RGP{I|L}SET 6.6155 - 348 + 1 1.792 86102.6 1.0 4297 4554 8835 HBL1_DMSO_200M_050219_2,8853 HBL1_DMSO_200M_050219_2,8853,GVGPIRDV False True GVGPIRDV 48.115128 406.73482054472 1680949.5 8835.0 ENSG00000170043|ENST00000303731|TRAPPC1 3.96059521039327 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8855 48.12 13.0 3982100.0 25 0 437990.0 + 26061 NMVAKVDEV 9 78 502.7584434046168 1003.5023338760336 2 502.7580444216728 MULTI CID FTMS 0 0 0 8854 3966236.75 0.6230436109992522 1 -0.1036338806152343 1 Unmodified _NMVAKVDEV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 49.93300154707207 0.0405168250806675 4 [MN]V{M(Oxidation (M))|F}DVVAG 9 5 65.099 0.0 0.0 6.4872 0.0 0.0 0.0 68.05139337711171 68.05139337711171 51.11941264025134 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.4247425010840047 0.0 [MN]V{M(Oxidation (M))|F}DVVAG 6.4872 - 134 + 1 1.803 45061.1 1.0 4298 4555 8854 HBL1_DMSO_200M_050219_2,8855 HBL1_DMSO_200M_050219_2,8855,NMVAKVDEV True True NMVAKVDEV 48.119797 502.758044421673 39639244.0 8854.0 ENST00000478340.2_1_6:35437033-35438524:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENSG00000198755|ENST00000322203|RPL10A 5.521304925282796 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8856 48.121 28.0 966430.0 25 0 140770.0 + 25126 MQDDNQVMV 9 53 540.2281223772479 1078.4416918212958 2 540.2288696169853 MULTI CID FTMS 0 0 0 8854 1492517.0 0.182816028048865 2 -0.2135581970214843 2 Unmodified _MQDDNQVMV_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 31.26834338654808 0.1333407332142048 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDNQV{[ET]|[MV]} 9 0 + 40.328 0.0 0.0 3.7394 3.7394 76.844 0.0 0.0 0.0 4.137342758552691 25.63486257521106 4.137342758552691 9.208187539523747 0 0.5 0.0 0.0 0.8494850021680094 + + {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDNQV{[ET]|[MV]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDGGQV{[ET]|[MV]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDN[AG]V{[ET]|[MV]};{[QN]|[E{I|L}]|[KN]}DDMQV{[ET]|[MV]};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))S]NQV{[ET]|[MV]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DDGG[AG]V{[ET]|[MV]};{[QN]|[E{I|L}]|[KN]}DDM[AG]V{[ET]|[MV]};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))S]GGQV{[ET]|[MV]};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))S]N[AG]V{[ET]|[MV]} 3.7394;2.8856;2.8856;2.8382;2.559;2.0358;1.9843;1.7052;1.7052 +;-;-;-;-;-;-;-;- + 102 1 1.803 29841.0 1.0 4299 4555 8854 HBL1_DMSO_200M_050219_2,8856 HBL1_DMSO_200M_050219_2,8856,MQDDNQVMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8857 48.122 31.0 2100200.0 25 0 399940.0 + 4501 DAYIPRTGV 9 58 496.26427452098034 990.5139961087608 2 496.2643310427666 MULTI CID FTMS 0 0 0 8854 1733872.375 0.5217939491973329 1 -0.1036338806152343 3 Unmodified _DAYIPRTGV_ ENSG00000164074|ENST00000645843|ABHD18;ENST00000473040.6_1_4:128905516-128956965:+|nuORF;nc|ENSG00000164074|Q0P651-2|ABHD18;nc|ENSG00000164074|Q0P651-3|ABHD18;nc|ENSG00000164074|Q0P651-4|ABHD18;nc|ENSG00000164074|Q0P651|ABHD18 20.41453444215458 0.284085796332423 4 {[DA]|[EG]}Y{I|L}V 5 4 48.456 0.0 0.0 4.892 0.0 0.0 0.0 426.2105196588501 426.2105196588501 38.27455168709157 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[DA]|[EG]}Y{I|L}V 4.892 - 25 + 1 1.803 54650.1 1.0 4300 4555 8854 HBL1_DMSO_200M_050219_2,8857 HBL1_DMSO_200M_050219_2,8857,DAYIPRTGV False True DAYIPRTGV 48.122153 496.264331042767 47334808.0 8854.0 nc|ENSG00000164074|Q0P651-3|ABHD18;;nc|ENSG00000164074|Q0P651-2|ABHD18;;ENST00000473040.6_1_4:128905516-128956965:+|nuORF;;nc|ENSG00000164074|Q0P651-4|ABHD18;;ENSG00000164074|ENST00000645843|ABHD18;;nc|ENSG00000164074|Q0P651|ABHD18 3.723109722137451 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8858 48.124 96.0 731310.0 25 0 119390.0 + 5765 DPPDGIKV 8 81 420.7265342156436 839.4385154980872 2 420.7267333865166 MULTI CID FTMS 0 0 0 8854 715688.875 0.4110353685007019 7 -0.5688056945800781 4 Unmodified _DPPDGIKV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 30.63653989081413 0.3996269429323407 4 DPPD{[VA]|[{I|L}G]}KV 8 0 + 58.893 0.0 0.0 7.0158 7.0158 83.381 0.0 0.0 0.0 20.70570735618212 4.101744650890495 4.101744650890495 4.101744650890495 0 0.4247425010840047 2.0 0.0 0.2742275032520141 + + DPPD{[VA]|[{I|L}G]}KV;DPPD{[VA]|[{I|L}G]}VK;DPPK{[CA]|SS}[{I|L}P] 7.0158;6.5272;4.7449 +;-;- + 110 + 1 1.803 59473.0 1.0 4301 4555 8854 HBL1_DMSO_200M_050219_2,8858 HBL1_DMSO_200M_050219_2,8858,DPPDGIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8859 48.127 132.0 490280.0 25 0 50598.0 + 38669 DATTIAKI 8 102 416.7423374955306 831.4701220578612 2 416.7422973513603 MULTI CID FTMS 0 0 0 8854 498139.09375 0.5419058118195901 1 -0.1036338806152343 5 Unmodified _TTLAADKL_ ENSG00000105851|ENST00000496166|PIK3CG;PIK3CG|p.T895A|1|0.42|ENSG00000105851|chr7:106883086-106883086|A/G|missense_variant 40.44857923139169 0.2267865117615937 4 {[DA]|[EG]}TT{I|L}AK{I|L} 8 4 + 68.889 0.0 0.0 8.2852 8.2852 95.876 0.0 0.0 0.0 47.14964095499696 12.914930551903224 12.914930551903224 19.54242509439325 0 0.7742275032520141 2.0 0.0 0.0 {[DA]|[EG]}TT{I|L}AK{I|L};{[DA]|[EG]}TT{I|L}{I|L}[KA];[VG][{I|L}A][R{I|L}]CT 8.2852;5.9348;0.042295 -;-;- 200 + 1 1.803 53304.6 1.0 4302 4555 8854 HBL1_DMSO_200M_050219_2,8859 HBL1_DMSO_200M_050219_2,8859,TTLAADKL False False DATTIAKI 48.126911 416.74229735136 11862652.0 8854.0 ENSG00000105851|ENST00000496166|PIK3CG;;PIK3CG|p.T895A|1|0.42|ENSG00000105851|chr7:106883086-106883086|A/G|missense_variant 4.823752164840698 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8860 48.129 76.0 757420.0 25 0 56773.0 + + 267 DAELATRAI 9 87 480.26163039333136 958.5087078534629 2 480.2617675662041 MULTI CID FTMS 0 0 0 8854 478651.5625 0.343579044366702 2 -0.2135581970214843 6 Unmodified _ADEIEKRV_ ENSG00000168036|ENST00000349496|CTNNB1 25.399314129420983 0.5099049743284904 4 {[DA]|[EG]}E{I|L}AT{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 9 -1 + 54.103 0.0 0.0 5.6445 5.6445 80.505 0.0 0.0 0.0 33.64516253185087 0.2018122933698407 0.2018122933698407 6.056641155967881 0 1.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}E{I|L}AT{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[DA]|[EG]}E{I|L}A[RV]SV;WE{I|L}A[Q{I|L}]TV;WE{I|L}A[Q{I|L}]S{I|L} 5.6445;5.0126;4.167;4.0264 -;-;-;- 207 + 1 1.803 49262.6 1.0 4303 4555 8854 HBL1_DMSO_200M_050219_2,8860 HBL1_DMSO_200M_050219_2,8860,ADEIEKRV False False DAELATRAI 48.128655 480.261767566204 20584050.0 8854.0 ENSG00000168036|ENST00000349496|CTNNB1 1.3645375967025757 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8861 48.131 121.0 791500.0 25 0 57960.0 41170 VPCPPLRRV 9 85 346.2075584593151 1035.6008459781451 3 346.2072936892509 MULTI CID FTMS 0 0 0 8854 294297.1875 0.6650364023627322 1 -0.1036338806152343 7 Unmodified _VPCPPLRRV_ ENSG00000171763|ENST00000305560|SPATA5L1;nc|ENSG00000171763|Q9BVQ7-2|AFG2B;nc|ENSG00000171763|Q9BVQ7-3|AFG2B 15.248480904072842 0.4239247793462406 4 VPCV 4 5 40.623 0.0 0.0 3.9226 0.0 0.0 0.0 634.380891008529 634.380891008529 13.699112850717938 0.0 0.0 0.0 0 0.2742275032520141 0.744727494896694 0.0 0.0 VPCV 3.9226 - 100 + 1 1.803 83248.1 1.0 4304 4555 8854 HBL1_DMSO_200M_050219_2,8861 HBL1_DMSO_200M_050219_2,8861,VPCPPLRRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8862 48.136 271.0 276400.0 25 0 30218.0 -1 0 90 562.3080012279734 561.3007247613733 1 562.3082763552666 MULTI CID FTMS 0 0 0 8854 273501.28125 0.5542008346787775 2 -0.2135581970214843 8 4 TT{I|L}D{I|L} 5 -1 + 49.582 0.0 0.0 8.8334 8.8334 88.306 0.0 0.0 0.0 5.028947740850356 5.598943791441968 5.028947740850356 5.028947740850356 0 0.9604093769761876 1.3010299956639813 0.7302046884880937 0.0 TT{I|L}D{I|L};[{I|L}T]TEV;{[DS]|[MA]|[CV]|TT}{I|L}EV;{[QN]|[E{I|L}]|[KN]}TTV;[{I|L}T]ETV;{[ET]|[MV]}{I|L}TV;{I|L}{I|L}[WM];[VG]{I|L}HH 8.8334;7.9375;7.836;7.7419;6.2447;3.6715;1.4994;0.6256 -;-;-;-;-;-;-;- 221 + 1 1.803 62173.7 1.0 4305 4555 8854 HBL1_DMSO_200M_050219_2,8862 HBL1_DMSO_200M_050219_2,8862, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8863 48.14 172.0 345880.0 25 0 26198.0 + 26165 NPYYDSRVV 9 89 556.7734303926117 1111.5323078520232 2 556.7718994021416 MULTI CID FTMS 0 0 0 8854 268436.5 1.0 0 0.0 9 Unmodified _NPYYDSRVV_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 43.77239144664712 0.0547478964384323 4 NPYYD 5 4 63.87 0.0 0.0 5.7461 0.0 0.0 0.0 456.2579105701138 456.2579105701138 53.38508844549963 0.0 0.0 0.0 0 0.6861818737241735 1.154901959985743 0.75 0.0 + NPYYD 5.7461 + + 107 + 1 1.803 51836.5 1.0 4306 4555 8854 HBL1_DMSO_200M_050219_2,8863 HBL1_DMSO_200M_050219_2,8863,NPYYDSRVV True True NPYYDSRVV 48.139536 556.771899402142 2204476.5 8854.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 4.828128814697266 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8864 48.145 304.0 349630.0 25 0 32290.0 + -1 VPMTPLRTV 9 126 515.2906429723337 1028.5667330114672 2 515.2917968630791 MULTI CID FTMS 0 0 0 8854 206049.40625 0.2051567819141902 -18 1.7627220153808594 10 Oxidation (M) _VPM(Oxidation (M))TPLRTV_ ENSG00000107949|ENST00000278100|BCCIP 28.49450938151212 0.1686335738423394 4 VP{M(Oxidation (M))|F}T 4 -1 56.503 0.0 0.0 5.4934 0.0 0.0 0.0 581.341400025907 581.341400025907 33.31546893236258 0.0 0.0 0.0 0 0.3054621874040891 1.2218487496163564 1.2302046884880935 0.0 VP{M(Oxidation (M))|F}T 5.4934 + + 303 + 1 1.803 88643.0 1.0 4307 4555 8854 HBL1_DMSO_200M_050219_2,8864 HBL1_DMSO_200M_050219_2,8864,VPMTPLRTV False False VPMTPLRTV 48.145109 515.291796863079 2967004.75 8854.0 ENSG00000107949|ENST00000278100|BCCIP 7.626321315765381 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8865 48.15 241.0 376780.0 25 0 44638.0 22170 LPPVRSSL 8 88 434.76587112779487 867.5171893223898 2 434.7661010622978 MULTI CID FTMS 0 0 0 8854 197649.03125 0.3313821503353134 15 -1.098297119140625 11 Unmodified _LPPVRSSL_ ENSG00000175877|ENST00000320531|TMEM270;nc|ENSG00000175877|Q6UE05-2|TMEM270 26.88365393820708 0.4786498634179528 4 {I|L}PP 3 5 46.44 0.0 0.0 5.3532 0.0 0.0 0.0 557.3043306940061 557.3043306940061 8.767314829186823 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + {I|L}PP 5.3532 + + 59 + 1 1.803 77041.5 1.0 4308 4555 8854 HBL1_DMSO_200M_050219_2,8865 HBL1_DMSO_200M_050219_2,8865,LPPVRSSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8866 48.154 218.0 386330.0 25 0 27067.0 + 12485 GVARGIDFHHV 11 111 403.2160400653491 1206.6262907962473 3 403.2158386111259 MULTI CID FTMS 0 0 0 8854 158538.125 1.0 0 0.0 12 Unmodified _GVARGIDFHHV_ ENSG00000136271|ENST00000258772|DDX56;ENST00000446987.5_1_7:44605603-44612175:-|nuORF;nc|ENSG00000136271|Q9NY93-2|DDX56 20.41453444215458 0.6105011870913812 4 RQRHV 5 8 29.437 0.0 0.0 2.4396 0.0 0.0 512.2719593732437 0.0 512.2719593732437 0.0 17.21848749616356 0.0 0.0 0 0.9604093769761876 0.0 0.0 0.0 RQRHV 2.4396 - 193 1 1.803 68943.4 1.0 4309 4555 8854 HBL1_DMSO_200M_050219_2,8866 HBL1_DMSO_200M_050219_2,8866,GVARGIDFHHV False True GVARGIDFHHV 48.15374 403.215838611126 934176.625 8854.0 nc|ENSG00000136271|Q9NY93-2|DDX56;;ENSG00000136271|ENST00000258772|DDX56;;ENST00000446987.5_1_7:44605603-44612175:-|nuORF 4.996569792429606 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8867 48.162 471.0 191060.0 25 0 16931.0 + 26112 NPNIKSLVV 9 125 492.2974984222936 982.5804439113872 2 492.2984191775322 MULTI CID FTMS 0 0 0 8854 113954.5078125 0.0022954488099208 27 -2.0810775756835938 13 Unmodified _NPNIKSLVV_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 20.453626601364224 0.2830276176381075 4 [NP]NK{I|L}TVC 8 4 22.471 0.0 0.0 2.2869 0.0 0.0 0.0 110.1041516627628 110.1041516627628 4.027680290966103 0.0 0.0 0.0 0 0.5 0.6575773191777937 0.4247425010840047 0.5 [NP]NK{I|L}TVC 2.2869 - 393 1 1.803 71997.1 1.0 4310 4555 8854 HBL1_DMSO_200M_050219_2,8867 HBL1_DMSO_200M_050219_2,8867,NPNIKSLVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8868 48.176 800.0 119500.0 25 0 6097.5 -1 ELWDQPLLC 9 155 587.2852952012344 1172.5560374692686 2 587.7714111208916 MULTI CID FTMS 0 0 0 -1 0 14 Carbamidomethyl (C) _ELWDQPLLC(Carbamidomethyl (C))_ ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1;nc|ENSG00000187240|Q8NCM8-3|DYNC2H1 13.90604991867851 0.4602628045680013 4 {[TV]|[{I|L}S]}{I|L}HH{M(Oxidation (M))|F}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 9 -1 + 24.221 0.0 0.0 2.0657 2.0657 74.507 0.0 0.0 0.0 6.3560164394384415 1.6242454627798892 1.6242454627798892 9.330984399557424 0 0.4794034035192909 1.6989700043360187 0.5044321917401079 0.0 {[TV]|[{I|L}S]}{I|L}HH{M(Oxidation (M))|F}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[MT]{M(Oxidation (M))|F}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[QA]P[YK]{M(Oxidation (M))|F}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};{[QN]|[E{I|L}]|[KN]}W{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}P]C(Carbamidomethyl (C)){I|L} 2.0657;1.2699;0.72749;0.437 -;-;-;- 1239 1 1.803 73785.5 0.6299999952316284 4311 4555 8854 HBL1_DMSO_200M_050219_2,8868 HBL1_DMSO_200M_050219_2,8868,ELWDQPLLC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8869 48.19 792.0 236020.0 25 0 4031.9 14390 IFGVVWCNF 9 241 362.1808706501768 0 362.1806518435478 PEAK CID FTMS 0 0 0 8854 89540.4375 0.6299910952804987 11 -0.8158912658691406 15 Unmodified _IFGVVWCNF_ ENSG00000143147|ENST00000682931|GPR161;ENST00000493800.1_1_1:168059784-168074118:-|nuORF;nc|ENSG00000143147|Q8N6U8-2|GPR161;nc|ENSG00000143147|Q8N6U8-6|GPR161 5.230669730166228 0.3444685223463734 4 K 1 9 4.6041 0.0 0.0 0.63738 0.0 0.0 136.95004588844102 454.2782077728047 591.2282536612457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.63738 - 5 + 1 1.803 151973.4 1.0 4312 4555 8854 HBL1_DMSO_200M_050219_2,8869 HBL1_DMSO_200M_050219_2,8869,IFGVVWCNF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8870 48.203 800.0 175850.0 25 0 9728.9 + 4334 DASLLKKV 8 161 437.2742166423995 872.533880351599 2 437.2743102908134 MULTI CID FTMS 0 0 0 8854 88326.0 0.6588033358883506 -1 0.10955810546875 16 Unmodified _DASLLKKV_ ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10 58.6788170122104 0.1149141431586871 4 DAS{I|L}{I|L}KKV 8 0 + 82.777 0.0 0.0 9.4869 9.4869 99.4 0.0 0.0 0.0 64.10448748062029 12.184290373512042 12.184290373512042 82.7766251719047 0 1.1237125054200234 2.0 0.0 0.2134679910804404 + + DAS{I|L}{I|L}KKV 9.4869 + + 184 + 1 1.803 112828.1 0.4600000083446502 4313 4555 8854 HBL1_DMSO_200M_050219_2,8870 HBL1_DMSO_200M_050219_2,8870,DASLLKKV True True DASLLKKV 48.203405 437.274310290813 631997.25 8854.0 nc|ENSG00000130638|Q9UBB4-2|ATXN10;;ENSG00000130638|ENST00000252934|ATXN10 5.828739960988362 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8871 48.219 800.0 91830.0 25 0 5066.6 + 14497 IGLGTMPQEEA 11 143 573.2783873291513 1144.5422217251023 2 573.2784911990166 MULTI CID FTMS 0 0 0 8854 89111.8671875 0.4599272475603893 1 -0.1036338806152343 17 Unmodified _IGLGTMPQEEA_ REV__ENST00000399083.1_1_17:19061550-19062206:-|nuORF 13.042465956692816 0.7638483625850725 4 {[VA]|[{I|L}G]}ATVD 6 -1 21.336 0.0 0.0 1.8641 0.0 0.0 0.0 585.24568787184 585.24568787184 10.95733421148136 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.5752574989159953 0.0 {[VA]|[{I|L}G]}ATVD 1.8641 - 316 1 1.803 58475.9 0.5199999809265137 4314 4555 8854 HBL1_DMSO_200M_050219_2,8871 HBL1_DMSO_200M_050219_2,8871,IGLGTMPQEEA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8873 48.224 54.0 728580.0 25 0 51019.0 + 25085 MPVTPQASV 9 83 465.2413778613167 928.4682027894336 2 465.2418090701103 MULTI CID FTMS 0 0 0 8872 668580.625 0.4551247736457012 2 -0.1937065124511718 1 Unmodified _MPVTPQASV_ ENSG00000115825|ENST00000234179|PRKD3;ENST00000494667.5_1_2:37496701-37543667:-|nuORF;nc|ENSG00000115825|O94806-2|PRKD3 28.486842064014134 0.1687311288560894 4 [VP]TM 4 6 23.325 0.0 0.0 2.5122 0.0 0.0 0.0 497.234901358046 497.234901358046 2.4793345544852485 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.6694451763165201 0.0 [VP]TM 2.5122 - 129 1 1.814 38084.0 1.0 4315 4556 8872 HBL1_DMSO_200M_050219_2,8873 HBL1_DMSO_200M_050219_2,8873,MPVTPQASV False True MPVTPQASV 48.223886 465.24180907011 54057060.0 8872.0 nc|ENSG00000115825|O94806-2|PRKD3;;ENSG00000115825|ENST00000234179|PRKD3;;ENST00000494667.5_1_2:37496701-37543667:-|nuORF 5.607163747151692 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8874 48.226 88.0 612090.0 25 0 55422.0 + 25003 MPPPPPQGV 9 82 460.23852327962805 918.462493626056 2 460.2389099001884 MULTI CID FTMS 0 0 0 8872 437831.71875 0.0236256546497888 98 -7.9298095703125 2 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 59.79521254764295 0.0261954583213598 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 40.068 0.0 0.0 4.3625 4.3625 76.802 0.0 0.0 0.0 3.979400086720375 16.122731327798547 3.979400086720375 7.686143099099851 0 1.0682503180159344 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;[VG][EP]HPQR;[PS][HT]PPQR;[PS][TP]HPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR;[VP]{[DA]|[EG]}HPQR;{NN|[MP]|[D{I|L}]|[EV]}P[YK]QR;[PS][KS][DV]MR 4.3625;3.5257;3.5227;2.8145;1.5703;1.5072;1.2162;0.99237 -;-;-;-;-;-;-;- 252 1 1.814 47385.5 1.0 4316 4556 8872 HBL1_DMSO_200M_050219_2,8874 HBL1_DMSO_200M_050219_2,8874,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8875 48.227 47.0 1225900.0 25 0 144170.0 + 42716 VVAPDNLKQV 10 92 541.8139779161061 1081.613402899012 2 541.8141357302666 MULTI CID FTMS 0 0 0 8872 1298229.125 0.932733192885249 -1 0.1036338806152343 3 Unmodified _VVAPDNLKQV_ ENSG00000070367|ENST00000621441|EXOC5;ENST00000510543.1_1_4:63683420-63684509:+|nuORF;ENST00000554011.5_1_14:57675329-57698504:-|nuORF 62.57269311338072 0.0298375429882549 4 VVAP[DN]{I|L}KQV 10 0 + 61.437 0.0 0.0 5.6801 5.6801 81.666 0.0 0.0 0.0 17.11635608164464 12.759070386030269 12.759070386030269 7.016675202793721 0 1.0 1.6989700043360187 0.3494850021680094 1.110924374808178 + + VVAP[DN]{I|L}KQV;VVAYY{I|L}KQV;VVAP[DN]{I|L}K[AG]V;[DP]N{I|L}AKGAVVV;[DP]N{I|L}KAGAVVV;VVAYY{I|L}K[AG]V;[DP]N{I|L}AKQVVV;[DP]N{I|L}KQAVVV;{[QV]|[N{I|L}]|[RA]|[KV]}[DP]AKGAVVV;YY{I|L}AKGAVVV 5.6801;5.0314;4.5504;4.5005;4.1078;3.8976;3.7333;3.4998;3.4131;3.4078 +;-;-;-;-;-;-;-;-;- + 495 + 1 1.814 55475.6 1.0 4317 4556 8872 HBL1_DMSO_200M_050219_2,8875 HBL1_DMSO_200M_050219_2,8875,VVAPDNLKQV True True VVAPDNLKQV 48.227115 541.814135730267 10913119.0 8872.0 ENST00000510543.1_1_4:63683420-63684509:+|nuORF;;ENST00000554011.5_1_14:57675329-57698504:-|nuORF;;ENSG00000070367|ENST00000621441|EXOC5 5.484885851542155 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8876 48.229 107.0 748160.0 25 0 89124.0 + 16118 ITSSAVTTALK 11 106 546.3188919771992 1090.6232310211983 2 546.3192016482353 MULTI CID FTMS 0 0 0 8872 522833.46875 0.0371933739387175 -3 0.319732666015625 4 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 29.28111348798908 0.4046731465847057 4 {I|L}TSSAVTTA{I|L}K 11 0 + 91.817 0.0 0.0 8.4187 8.4187 98.344 0.0 0.0 0.0 78.796644537273 10.37003387971943 10.37003387971943 91.81650620904227 0 0.4247425010840047 2.0 0.3807196863200844 0.5484550065040282 + + {I|L}TSSAVTTA{I|L}K 8.4187 + + 221 + 1 1.814 66818.4 1.0 4318 4556 8872 HBL1_DMSO_200M_050219_2,8876 HBL1_DMSO_200M_050219_2,8876,ITSSAVTTALK False True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 8877 48.236 349.0 406650.0 25 0 23971.0 + 31606 RQVPKLLSA 9 135 506.3190569067542 1010.6235608803084 2 506.3190490603447 MULTI CID FTMS 0 0 0 8872 285759.34375 0.2870991818003657 -2 0.2131919860839843 5 Unmodified _RQVPKLLSA_ ENSG00000070785|ENST00000360403|EIF2B3;nc|ENSG00000070785|Q9NR50-2|EIF2B3;nc|ENSG00000070785|Q9NR50-3|EIF2B3 36.506200033944 0.094635877243972 4 {[QV]|[N{I|L}]|[RA]|[KV]}RPK{I|L}{I|L}SA 9 2 + 46.736 0.0 0.0 4.6245 4.6245 72.489 0.0 0.0 0.0 3.194313196178556 13.46787486224656 3.194313196178556 3.194313196178556 0 1.274227503252014 0.0 0.4247425010840047 0.2614393726401688 {[QV]|[N{I|L}]|[RA]|[KV]}RPK{I|L}{I|L}SA;{[{M(Oxidation (M))|F}H]|[RQ]}VPK{I|L}{I|L}SA;{[QV]|[N{I|L}]|[RA]|[KV]}RPK{I|L}S{I|L}A;{[VA]|[{I|L}G]}GRPK{I|L}{I|L}SA;{[{M(Oxidation (M))|F}H]|[RQ]}VPK{I|L}S{I|L}A;{[QV]|[N{I|L}]|[RA]|[KV]}R{I|L}[KP]{I|L}SA;{I|L}{I|L}[KP][RN]{I|L}SA;{[QV]|[N{I|L}]|[RA]|[KV]}RPKS{I|L}{I|L}A;{[{M(Oxidation (M))|F}H]|[RQ]}V{I|L}[KP]{I|L}SA;[{I|L}P][RN]K{I|L}{I|L}SA 4.6245;4.3084;3.736;3.6289;3.4199;3.2866;3.1245;3.091;2.9705;2.7962 -;+;-;-;-;-;-;-;-;- + 502 1 1.814 112886.1 1.0 4319 4556 8872 HBL1_DMSO_200M_050219_2,8877 HBL1_DMSO_200M_050219_2,8877,RQVPKLLSA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8878 48.239 171.0 536280.0 25 0 52745.0 + 24391 MFPEHAVKAY 10 113 398.1988416358539 1191.5746955077618 3 398.1988708376884 MULTI CID FTMS 0 0 0 8872 250942.546875 0.4952143399348044 -2 0.2131919860839843 6 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 32.78568957990786 0.2337485590374503 4 {[YD]|[{M(Oxidation (M))|F}M]}PEHAVKAY 10 0 + 50.883 0.0 0.0 4.2702 4.2702 79.743 0.0 0.0 0.0 18.81900687922005 9.71784293346584 9.71784293346584 9.71784293346584 0 0.0 1.154901959985743 0.5 0.0 + + {[YD]|[{M(Oxidation (M))|F}M]}PEHAVKAY;{[YD]|[{M(Oxidation (M))|F}M]}PEHAVK{M(Oxidation (M))|F}S;{[YD]|[{M(Oxidation (M))|F}M]}PEHAVY[KA];[EP]HAV[WP]P{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}T]WV[WP]P{M(Oxidation (M))|F}{I|L};[HA]VEP[WP]P{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[PS]V[WP]P{M(Oxidation (M))|F}{I|L};[TP][HT]P[WP]P{M(Oxidation (M))|F}{I|L};[HA][EP]V[WP]P{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[VS]P[WP]P{M(Oxidation (M))|F}{I|L} 4.2702;3.4547;2.7082;1.7099;1.3601;0.9735;0.38898;0.34031;0.22424;0.21768 +;-;-;-;-;-;-;-;-;- + 283 + 1 1.814 77503.1 1.0 4320 4556 8872 HBL1_DMSO_200M_050219_2,8878 HBL1_DMSO_200M_050219_2,8878,MFPEHAVKAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8879 48.243 188.0 396510.0 25 0 36821.0 18680 LAISSDSHL 9 109 471.7483499510981 941.4821469689964 2 471.7484008669853 MULTI CID FTMS 0 0 0 8872 223665.171875 1.0 0 0.0 7 Unmodified _LAISSDSHL_ ENSG00000188000|ENST00000641288|OR7D2;ENSG00000262628|ENST00000575751|OR1D5;nc|ENSG00000262628|P47884|OR1D4 23.1484247019978 0.2366544122328345 4 [{I|L}A]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}[YR] 7 6 + 26.649 0.0 0.0 2.8306 2.8306 72.11 0.0 0.0 0.0 15.935914365322116 2.419085435453248 2.419085435453248 7.367585652254185 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}A]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}[YR];[{I|L}A][{M(Oxidation (M))|F}V]{[CA]|SS}[YR];[{I|L}A]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[HC]{I|L}{I|L} 2.8306;2.048;1.1939 -;-;- 254 + 1 1.814 60598.8 1.0 4321 4556 8872 HBL1_DMSO_200M_050219_2,8879 HBL1_DMSO_200M_050219_2,8879,LAISSDSHL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8880 48.246 189.0 319170.0 25 0 27443.0 34115 SLLPSQRW 8 90 493.77446080257823 985.5343686719564 2 493.7740966677666 MULTI CID FTMS 0 0 0 8872 216517.9375 0.4528404265157672 -2 0.2131919860839843 8 Unmodified _SLLPSQRW_ ENST00000565644.5_1_16:87864928-87865366:-|nuORF 19.438996006549623 0.6237395211498085 4 [VP]PSV 5 6 14.403 0.0 0.0 1.4614 0.0 0.0 0.0 503.2370224472395 503.2370224472395 1.92857185869514 0.0 0.0 0.0 0 0.0 0.619788758288394 0.3054621874040891 0.0 [VP]PSV 1.4614 - 305 1 1.814 51293.1 1.0 4322 4556 8872 HBL1_DMSO_200M_050219_2,8880 HBL1_DMSO_200M_050219_2,8880,SLLPSQRW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8881 48.26 800.0 150010.0 25 0 17007.0 + 13987 HYYDYPSIAH 10 133 633.2828626007969 1264.5511722683937 2 633.2835571169853 MULTI CID FTMS 0 0 0 8872 203230.53125 0.7663291227542602 2 -0.1937065124511718 9 Unmodified _HYYDYPSIAH_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 144.35026110057638 9.047829896336196e-05 4 HYYDYPS{I|L}AH 10 0 + 122.39 0.0 0.0 9.6788 9.6788 98.235 0.0 0.0 0.0 102.39700043360187 15.026975159433531 15.026975159433531 29.8526785162008 0 3.3807196863200843 1.6989700043360187 1.5044321917401078 0.0 + + HYYDYPS{I|L}AH;{[WN]|[YH]}YDYPS{I|L}AH;HYYDYPS[HA]{I|L};{[WN]|[YH]}YD[{I|L}T][{M(Oxidation (M))|F}V]AH;{[WN]|[YH]}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[WN]|[YH]}AH;{[WN]|[YH]}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AHYH;{[WN]|[YH]}YD[{I|L}T][PG]YH;{[WN]|[YH]}YD[{I|L}T]{NN|[MP]|[D{I|L}]|[EV]}[EP];{[WN]|[YH]}YD{[NV]|[RG]}[QT][EP];{[TV]|[{I|L}S]}PAH[RN][C(Carbamidomethyl (C))C]AH 9.6788;7.3181;7.2267;4.5412;3.6066;3.532;3.4281;2.1843;2.1154;1.9614 +;+;-;-;-;-;-;-;-;- + 815 + 1 1.814 92338.6 0.8199999928474426 4323 4556 8872 HBL1_DMSO_200M_050219_2,8881 HBL1_DMSO_200M_050219_2,8881,HYYDYPSIAH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8882 48.264 218.0 509080.0 25 0 93050.0 + -1 MPRGPTLGHV 10 92 532.766521062037 1063.518489190874 2 532.7684814333916 MULTI CID FTMS 0 0 0 8872 195977.734375 0.3517108256351395 4 -0.36578369140625 10 Oxidation (M) _SIM(Oxidation (M))IYWHV_ nc|ENSG00000136758|Q96TA2|YME1L1;nc|ENSG00000136758|Q96TA2-3|YME1L1;ENSG00000136758|ENST00000376016|YME1L1 5.230669730166228 0.792582437072536 4 PGHV 4 -1 14.379 0.0 0.0 1.3521 0.0 0.0 655.2970974445833 0.0 655.2970974445833 0.0 2.9594684216102074 0.0 0.0 0 0.0 0.0 0.0 0.0 PGHV 1.3521 - 76 + 1 1.814 90044.5 1.0 4324 4556 8872 HBL1_DMSO_200M_050219_2,8882 HBL1_DMSO_200M_050219_2,8882,SIMIYWHV False False MPRGPTLGHV 48.264233 532.768481433392 0.0 8872.0 nc|ENSG00000136758|Q96TA2|YME1L1;;nc|ENSG00000136758|Q96TA2-3|YME1L1;;ENSG00000136758|ENST00000376016|YME1L1 0.8783484796682993 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8883 48.269 257.0 270420.0 25 0 13277.0 + 35473 STMGYMMAK 9 112 510.2213195549126 0 510.2215453982353 PEAK CID FTMS 0 0 0 8872 152098.5 1.0 0 0.0 11 Unmodified _STMGYMMAK_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 22.736283301280096 0.1762661025464585 4 MGYKM 5 5 23.36 0.0 0.0 2.2937 0.0 0.0 188.0772272156809 217.0623568170532 405.1395840327341 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 MGYKM 2.2937 - 99 + 1 1.814 58255.1 1.0 4325 4556 8872 HBL1_DMSO_200M_050219_2,8883 HBL1_DMSO_200M_050219_2,8883,STMGYMMAK False True STMGYMMAK 48.269004 510.221545398235 1166566.125 8872.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 7.934828440348308 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8884 48.273 224.0 406870.0 25 0 46702.0 -1 LPLCCARSL 9 114 363.8559541992853 1088.5460331980555 3 364.1908752322197 MULTI CID FTMS 0 0 0 8872 161803.3125 0.5870058902322818 -1 0.1036338806152343 12 2 Carbamidomethyl (C) _LPLC(Carbamidomethyl (C))C(Carbamidomethyl (C))ARSL_ ENST00000531896.5_1_8:145541583-145550314:-|nuORF 9.5439744041441 0.5815088571869578 4 {I|L}P{I|L}GW 5 -1 57.691 0.0 0.0 5.2998 0.0 0.0 0.0 519.1852511041624 519.1852511041624 37.50840313363199 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P{I|L}GW 5.2998 - 117 + 1 1.814 84155.4 1.0 4326 4556 8872 HBL1_DMSO_200M_050219_2,8884 HBL1_DMSO_200M_050219_2,8884,LPLCCARSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8885 48.279 239.0 643940.0 25 0 89992.0 + 44483 YPADLAHKI 9 166 343.1908352561361 1026.5506763686085 3 343.1909362673759 MULTI CID FTMS 0 0 0 8872 133415.78125 0.2572056258762304 -4 0.4098281860351562 13 Unmodified _YPADLAHKI_ ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC 18.721224879955976 0.3299216912490967 4 YPAD{I|L}AHK{I|L} 9 0 + 62.104 0.0 0.0 6.0498 6.0498 79.029 0.0 0.0 0.0 24.17368560510363 3.590219426416681 3.590219426416681 3.590219426416681 0 0.3054621874040891 0.7695510786217261 0.3252574989159953 0.0 + + YPAD{I|L}AHK{I|L};YPAD{I|L}AH{I|L}K;YP{I|L}{[DA]|[EG]}AHK{I|L};YP{I|L}{[DA]|[EG]}AH{I|L}K;Y{I|L}P{[DA]|[EG]}AHK{I|L};Y{I|L}P{[DA]|[EG]}AH{I|L}K;YPA[KQ]PNP{I|L};YPA[KQ]PN{I|L}P;YPA[KQ]PGGP{I|L};YPA[KQ]P[QP]V 6.0498;5.7001;4.5344;4.1847;3.5152;3.1654;2.4579;2.145;1.5609;1.3509 +;-;-;-;-;-;-;-;-;- + 782 + 1 1.814 132811.7 1.0 4327 4556 8872 HBL1_DMSO_200M_050219_2,8885 HBL1_DMSO_200M_050219_2,8885,YPADLAHKI False True YPADLAHKI 48.278867 343.190936267376 16911593.5 8872.0 ENSG00000134982|ENST00000257430|APC;;nc|ENSG00000134982|P25054-3|APC;;nc|ENSG00000134982|P25054-2|APC 5.363746960957845 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8886 48.286 397.0 260610.0 25 0 14701.0 + 17288 KLQEKIQEL 9 128 564.8357996106547 1127.6570462881093 2 564.8350707888603 MULTI CID FTMS 0 0 0 8872 111551.25 0.459742609616686 -9 0.8531150817871094 14 Unmodified _KLQEKIQEL_ ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE 103.82355648334676 0.0089708497247674 4 {NN|[MP]|[D{I|L}]|[EV]}AAK{I|L}K{M(Oxidation (M))|F}{I|L} 9 5 69.277 0.0 0.0 6.1434 0.0 0.0 0.0 125.07333888207258 125.07333888207258 19.456060319448795 0.0 0.0 0.0 0 1.4049471895720984 2.0 1.551203852579394 0.6861818737241735 {NN|[MP]|[D{I|L}]|[EV]}AAK{I|L}K{M(Oxidation (M))|F}{I|L} 6.1434 - 3192 1 1.814 83447.8 1.0 4328 4556 8872 HBL1_DMSO_200M_050219_2,8886 HBL1_DMSO_200M_050219_2,8886,KLQEKIQEL True True EVVEQGITRV 48.285986 564.83507078886 281565.8125 8872.0 ENST00000462978.1_1_1:155697409-155701908:+|nuORF;;ENSG00000132676|ENST00000368336|DAP3;;nc|ENSG00000132676|P51398-2|DAP3;;nc|ENSG00000132676|P51398-3|DAP3 3.866632461547852 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8887 48.3 800.0 181850.0 25 0 21175.0 -1 RWWYWPMS 8 122 614.2756688166868 1226.5367847001737 2 614.2764160037041 MULTI CID FTMS 0 0 0 8872 109898.3359375 0.3751575892687602 -3 0.319732666015625 15 Oxidation (M) _RWWYWPM(Oxidation (M))S_ ENST00000584716.1_1_17:30815096-30816294:+|nuORF 13.50788311687929 0.7113601687236069 4 {I|L}PS{M(Oxidation (M))|F} 4 -1 48.488 0.0 0.0 3.9532 0.0 0.0 764.3228697605235 0.0 764.3228697605235 0.0 9.63561288457661 0.0 0.0 0 0.8807196863200843 0.0 0.7742275032520141 0.0 {I|L}PS{M(Oxidation (M))|F} 3.9532 - 241 + 1 1.814 111683.1 0.5600000023841858 4329 4556 8872 HBL1_DMSO_200M_050219_2,8887 HBL1_DMSO_200M_050219_2,8887,RWWYWPMS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8888 48.314 800.0 215360.0 25 0 9008.3 + 13144 HFKRVLPGE 9 175 361.5417248192687 1081.603345058006 3 361.5416747927666 MULTI CID FTMS 0 0 0 8872 105397.703125 1.0 0 0.0 16 Unmodified _HFKRVLPGE_ REV__ENSG00000154328|ENST00000284503|NEIL2;REV__nc|ENSG00000154328|Q969S2-2|NEIL2;REV__nc|ENSG00000154328|Q969S2-4|NEIL2 5.296884461304476 0.7297726132274777 4 DP{M(Oxidation (M))|F}HKP 6 -1 58.99 0.0 0.0 5.4539 0.0 0.0 0.0 357.2171419733032 357.2171419733032 38.07319389984244 0.0 0.0 0.0 0 0.1989700043360188 1.5228787452803376 0.0 0.0 DP{M(Oxidation (M))|F}HKP 5.4539 - 143 + 1 1.814 142831.8 0.9200000166893004 4330 4556 8872 HBL1_DMSO_200M_050219_2,8888 HBL1_DMSO_200M_050219_2,8888,HFKRVLPGE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8889 48.329 800.0 128810.0 25 0 7243.2 + 33670 SIVRMYEEF 9 158 587.2852952012344 1172.5560374692686 2 587.2833129763603 MULTI CID FTMS 0 0 0 8872 99014.984375 0.8629517648785074 -2 0.2131919860839843 17 Unmodified _SIVRMYEEF_ REV__ENSG00000198843|ENST00000471696|SELENOT 22.736283301280096 0.2418982879461534 4 VT{I|L}R[C(Carbamidomethyl (C))D]NND 9 -1 66.838 0.0 0.0 5.7002 0.0 0.0 0.0 82.06688104801015 82.06688104801015 52.14807562697487 0.0 0.0 0.0 0 0.5843105420796064 2.0 0.5891368308784531 0.5796896906561032 VT{I|L}R[C(Carbamidomethyl (C))D]NND 5.7002 - 1221 + 1 1.814 82927.3 0.5400000214576721 4331 4556 8872 HBL1_DMSO_200M_050219_2,8889 HBL1_DMSO_200M_050219_2,8889,SIVRMYEEF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8891 48.333 12.0 4743500.0 25 0 1046400.0 + 15263 IPHIHKSLI 9 80 353.2221878238477 1056.6447340717432 3 353.2220947146416 MULTI CID FTMS 0 0 0 8890 3696930.25 0.4735069344714621 1 -0.0837821960449218 1 Unmodified _IPHIHKSLI_ chr7:44834562-44835643|14|15.29|0.2|6.28|-|2|H2AZ2,None|2;ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-3|H2AZ2;nc|ENSG00000105968|Q71UI9-4|H2AZ2 29.84058131909904 0.1515068451768857 4 {I|L}PH{I|L}H[KS]{I|L}{I|L} 9 0 + 52.802 0.0 0.0 4.9971 4.9971 86.681 0.0 0.0 0.0 13.099396087305522 11.348200093054714 11.348200093054714 52.80185028817556 0 0.7742275032520141 0.0 0.4247425010840047 0.0 + + {I|L}PH{I|L}H[KS]{I|L}{I|L} 4.9971 + + 131 + 1 1.821 53554.6 1.0 4332 4557 8890 HBL1_DMSO_200M_050219_2,8891 HBL1_DMSO_200M_050219_2,8891,IPHIHKSLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8892 48.335 27.0 1831200.0 25 0 200220.0 + + 20886 VPAQVQSEI 9 86 485.7687766167918 0 485.7643920779228 PEAK CID FTMS 0 0 0 8890 1652384.875 0.6771142984028312 2 -0.18096923828125 2 Unmodified _LMPTGLPEL_ nc|ENSG00000170633|Q969K3-2|RNF34;ENSG00000170633|ENST00000361234|RNF34 23.1484247019978 0.1725298825155634 4 SQVV 4 -1 23.8 0.0 0.0 2.4548 0.0 0.0 260.1498446380773 293.1257723443969 553.2756169824743 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SQVV 2.4548 - 84 + 1 1.821 44438.5 1.0 4333 4557 8890 HBL1_DMSO_200M_050219_2,8892 HBL1_DMSO_200M_050219_2,8892,LMPTGLPEL False False VPAQVQSEI 48.334533 485.764392077923 47887364.0 8890.0 nc|ENSG00000170633|Q969K3-2|RNF34;;ENSG00000170633|ENST00000361234|RNF34 3.3255616823832197 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8893 48.336 28.0 1179900.0 25 0 99584.0 + -1 TMLDMCLKN 9 74 542.7438337785752 1083.4731146239503 2 542.7441284060478 MULTI CID FTMS 0 0 0 8890 1613170.5 0.7221908408078863 -1 0.10992431640625 3 Oxidation (M) _TMLDM(Oxidation (M))CLKN_ REV__ENSG00000205126|ENST00000378832|ACCSL;REV__ENST00000527145.1_1_11:44071584-44081467:+|nuORF 4.3292370932331545 0.7635526921153418 4 W 1 -1 14.604 0.0 0.0 1.3479 0.0 0.0 879.382887428441 0.0 879.382887428441 0.0 2.853261876534603 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.3479 - 56 + 1 1.821 36605.9 1.0 4334 4557 8890 HBL1_DMSO_200M_050219_2,8893 HBL1_DMSO_200M_050219_2,8893,TMLDMCLKN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8894 48.337 38.0 1663300.0 25 0 167300.0 + 26370 NSYVSPRI 8 82 468.2508449790174 934.4871370248349 2 468.2510558962822 MULTI CID FTMS 0 0 0 8890 1577896.75 0.9198813549403972 -1 0.10992431640625 4 Unmodified _NSYVSPRI_ ENSG00000136536|ENST00000409175|MARCHF7;nc|ENSG00000136536|Q9H992-2|MARCHF7 49.93300154707207 0.1395624531867191 4 [NS]Y 3 5 46.043 0.0 0.0 4.9271 0.0 0.0 0.0 567.3257044899317 567.3257044899317 34.05333107397176 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.6861818737241735 0.3494850021680094 + [NS]Y 4.9271 + + 186 1 1.821 51808.8 1.0 4335 4557 8890 HBL1_DMSO_200M_050219_2,8894 HBL1_DMSO_200M_050219_2,8894,NSYVSPRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8895 48.338 34.0 1555900.0 25 0 204870.0 15167 IPCVVGDEEV 10 90 530.2554701289986 1058.496387324797 2 530.7598144412041 MULTI CID FTMS 0 0 0 8890 1410382.125 0.8358697353640748 -1 0.10992431640625 5 Unmodified _IPCVVGDEEV_ ENSG00000159423|ENST00000375341|ALDH4A1;ENST00000494072.3_3_1:19209920-19216616:-|nuORF;nc|ENSG00000159423|P30038-2|ALDH4A1;nc|ENSG00000159423|P30038-3|ALDH4A1 15.847184025352805 0.5816416552707754 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CA]|SS}KAA{M(Oxidation (M))|F}A[SG] 11 9 + 49.187 0.0 0.0 4.6469 4.6469 77.781 0.0 0.0 0.0 7.592513926806781 1.804560644581308 1.804560644581308 7.592513926806781 0 0.0 2.0 0.3494850021680094 0.3252574989159953 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CA]|SS}KAA{M(Oxidation (M))|F}A[SG];{I|L}P{I|L}[C(Carbamidomethyl (C))D]AN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}A[SG];{I|L}P{I|L}[WC(Carbamidomethyl (C))]N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}P{I|L}[C(Carbamidomethyl (C))D]AQ{[QD]|[EN]|[WG]|[KD]|[RS]};{I|L}P{I|L}[WC(Carbamidomethyl (C))]Q{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}KAA{M(Oxidation (M))|F}A[SG];{I|L}P{I|L}[C(Carbamidomethyl (C))D]AGG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NA{M(Oxidation (M))|F}A{M(Oxidation (M))|F}A[SG];{I|L}P{I|L}[WC(Carbamidomethyl (C))]GG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.6469;3.9296;3.7869;3.7683;3.6452;3.4839;3.1724;3.0596;2.9603;2.8933 -;-;-;-;-;-;-;-;-;- 668 1 1.821 45101.5 1.0 4336 4557 8890 HBL1_DMSO_200M_050219_2,8895 HBL1_DMSO_200M_050219_2,8895,IPCVVGDEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8896 48.339 43.0 1193100.0 25 0 133070.0 + 21793 LPNGQTVQV 9 94 478.2636365497056 954.5127201662112 2 478.2637512087822 MULTI CID FTMS 0 0 0 8890 975600.6875 0.6229416075662194 -1 0.10992431640625 6 Unmodified _LPNGQTVQV_ ENSG00000118260|ENST00000353267|CREB1;ENST00000480189.5_1_2:208424955-208436489:+|nuORF;ENST00000494094.5_1_2:208420359-208432297:+|nuORF;nc|ENSG00000118260|P16220-1|CREB1;nc|ENSG00000118260|P16220-3|CREB1 34.10243960390752 0.1078313939113124 4 T[YT]QV 5 6 24.079 0.0 0.0 2.5226 0.0 0.0 344.20603401256466 0.0 344.20603401256466 0.0 6.454393316457406 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.6643943297944485 T[YT]QV 2.5226 - 302 + 1 1.821 44562.4 1.0 4337 4557 8890 HBL1_DMSO_200M_050219_2,8896 HBL1_DMSO_200M_050219_2,8896,LPNGQTVQV True True LPNGQTVQV 48.339262 478.263751208782 12850527.0 8890.0 ENST00000480189.5_1_2:208424955-208436489:+|nuORF;;nc|ENSG00000118260|P16220-3|CREB1;;ENST00000494094.5_1_2:208420359-208432297:+|nuORF;;ENSG00000118260|ENST00000353267|CREB1;;nc|ENSG00000118260|P16220-1|CREB1 4.300342559814453 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8897 48.341 73.0 804100.0 25 0 70759.0 + 15515 IPVGKSPMV 9 84 464.27009964060966 926.5256463480192 2 464.2702209353447 MULTI CID FTMS 0 0 0 8890 671303.4375 1.0 0 0.0 7 Unmodified _IPVGKSPMV_ ENSG00000149657|ENST00000279068|LSM14B;nc|ENSG00000149657|Q9BX40-3|LSM14B 24.020572477871973 0.2255576514309169 4 {I|L}PV[KG]{NN|[MP]|[D{I|L}]|[EV]}SV 9 2 + 45.314 0.0 0.0 4.8908 4.8908 70.334 0.0 0.0 0.0 22.382287586051103 1.8842499412940583 1.8842499412940583 1.706962271689747 0 0.3252574989159953 1.3979400086720375 0.0 0.0 {I|L}PV[KG]{NN|[MP]|[D{I|L}]|[EV]}SV;{I|L}PV[KG][WE]V;{I|L}P[RK]{NN|[MP]|[D{I|L}]|[EV]}SV 4.8908;4.7065;4.1916 -;-;- 151 + 1 1.821 49563.8 1.0 4338 4557 8890 HBL1_DMSO_200M_050219_2,8897 HBL1_DMSO_200M_050219_2,8897,IPVGKSPMV False True IPVGKSPMV 48.340962 464.270220935345 7038681.5 8890.0 nc|ENSG00000149657|Q9BX40-3|LSM14B;;ENSG00000149657|ENST00000279068|LSM14B 4.028824965159099 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8898 48.343 82.0 817320.0 25 0 87558.0 + 12417 GTLEEVPTA 9 103 458.7346323113712 915.4547116895424 2 458.7347900271416 MULTI CID FTMS 0 0 0 8890 664123.9375 0.3044346742767244 -2 0.2135581970214843 8 Unmodified _GTLEEVPTA_ ENSG00000198681|ENST00000356661|MAGEA1 57.47134341890925 0.0274820932774257 4 {[QN]|[E{I|L}]|[KN]}ESAVPTA 9 4 {[QN]|[E{I|L}]|[KN]}ES + + 35.824 21.682 4.7321 3.9133 3.9133 48.428 0.0 0.0 0.0 0.0 10.76060908785378 0.0 0.0 0 0.8807196863200843 0.0 0.6382104921644451 0.0 {[QN]|[E{I|L}]|[KN]}ESAVPTA 3.9133 - 316 + 1 1.821 61647.4 1.0 4339 4557 8890 HBL1_DMSO_200M_050219_2,8898 HBL1_DMSO_200M_050219_2,8898,GTLEEVPTA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8899 48.344 66.0 555540.0 25 0 40240.0 + 39198 TYQQVQQTL 9 80 554.7851514273293 1107.5557499214583 2 554.7855712771416 MULTI CID FTMS 0 0 0 8890 598331.6875 0.3774977022787306 -2 0.2135581970214843 9 Unmodified _TYQQVQQTL_ ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42 43.77239144664712 0.0547478964384323 4 [YT]QQVQ 6 3 48.07 0.0 0.0 4.3402 0.0 0.0 0.0 357.17523169319605 357.17523169319605 29.838169767871804 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.3807196863200844 0.3494850021680094 + [YT]QQVQ 4.3402 + + 496 1 1.821 33577.5 1.0 4340 4557 8890 HBL1_DMSO_200M_050219_2,8899 HBL1_DMSO_200M_050219_2,8899,TYQQVQQTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8900 48.346 79.0 1089500.0 25 0 144060.0 + 36409 SYSYQSRF 8 89 519.2373717443494 1036.460190555499 2 519.2382079958916 MULTI CID FTMS 0 0 0 8890 494061.25 1.0 0 0.0 10 Unmodified _SYSYQSRF_ ENSG00000189091|ENST00000302516|SF3B3 29.081581746732265 0.4323690340403521 4 {[{M(Oxidation (M))|F}C]|[YS]}SY[WK]{[CT]|[{M(Oxidation (M))|F}G]} 8 3 + 31.642 0.0 0.0 3.0529 3.0529 72.163 0.0 0.0 0.0 16.152340397648857 0.6694678963061307 0.6694678963061307 6.844924275137739 0 0.6307196863200843 0.0 0.566901560044258 0.0 {[{M(Oxidation (M))|F}C]|[YS]}SY[WK]{[CT]|[{M(Oxidation (M))|F}G]};{[SA]|[TG]}[H{I|L}]QYS[MT];{[TV]|[{I|L}S]}[HA]QYS[MT];{[{M(Oxidation (M))|F}C]|[YS]}SY[KA]S[MT];{[{M(Oxidation (M))|F}C]|[YS]}SY[KA]T{[MS]|[{M(Oxidation (M))|F}A]};[VS]EW[TP]S[MT];{[SA]|[TG]}[H{I|L}][AG]YS[MT];{[TV]|[{I|L}S]}[HA][AG]YS[MT];[VS]EW{[RE]|[WV]}[MT];[HM]{M(Oxidation (M))|F}V{[WN]|[YH]}{[CT]|[{M(Oxidation (M))|F}G]} 3.0529;2.3925;1.9321;1.7784;1.6918;1.5759;1.504;1.0437;0.65616;0.65187 -;-;-;-;-;-;-;-;-;- 148 + 1 1.821 71413.0 1.0 4341 4557 8890 HBL1_DMSO_200M_050219_2,8900 HBL1_DMSO_200M_050219_2,8900,SYSYQSRF False True SYSYQSRF 48.346222 519.238207995892 3415406.0 8890.0 ENSG00000189091|ENST00000302516|SF3B3 4.581319014231364 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8901 48.349 111.0 625770.0 25 0 108770.0 + 4875 DGFEATKNI 9 114 497.746581319122 993.478609705044 2 497.7454101443291 MULTI CID FTMS 0 0 0 8890 482245.9375 0.4114448651237603 -2 0.2135581970214843 11 Unmodified _DGFEATKNI_ ENSG00000087191|ENST00000310144|PSMC5;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5 57.72198328787511 0.0273433238377839 4 [DG]{M(Oxidation (M))|F}EATKN{I|L} 9 0 [DG]{M(Oxidation (M))|F} + + 52.049 10.915 3.4204 5.2391 5.2391 53.541 0.0 0.0 0.0 0.0 19.95159789708981 0.0 0.0 0 1.110924374808178 0.0 0.6861818737241735 0.5941876774005248 + + [DG]{M(Oxidation (M))|F}EATKN{I|L} 5.2391 + + 698 + 1 1.821 59303.6 1.0 4342 4557 8890 HBL1_DMSO_200M_050219_2,8901 HBL1_DMSO_200M_050219_2,8901,DGFEATKNI True True DGFEATKNI 48.348554 497.745410144329 8371135.5 8890.0 nc|ENSG00000087191|P62195-2|PSMC5;;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;;ENSG00000087191|ENST00000310144|PSMC5 5.5113525390625 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8902 48.352 171.0 581070.0 25 0 45212.0 + 4051 DALVLHKV 8 113 447.7736604922732 893.5327680513464 2 447.7740661501884 MULTI CID FTMS 0 0 0 8890 453330.21875 0.6010560954094716 1 -0.0837821960449218 12 Unmodified _DALVLHKV_ ENSG00000163939|ENST00000707071|PBRM1;ENST00000480064.1_1_3:52643285-52649409:-|nuORF;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 39.957323273325 0.2350051964751539 4 {[DA]|[EG]}{I|L}V{I|L}HKV 8 0 + 63.211 0.0 0.0 7.0743 7.0743 95.118 0.0 0.0 0.0 38.315016636499024 9.50781977329818 9.50781977329818 63.2107918022669 0 1.1307196863200843 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}{I|L}V{I|L}HKV 7.0743 + + 151 + 1 1.821 80669.8 1.0 4343 4557 8890 HBL1_DMSO_200M_050219_2,8902 HBL1_DMSO_200M_050219_2,8902,DALVLHKV False True DALVLHKV 48.351891 447.774066150188 10220391.0 8890.0 nc|ENSG00000163939|Q86U86-7|PBRM1;;ENSG00000163939|ENST00000707071|PBRM1;;nc|ENSG00000163939|Q86U86-8|PBRM1;;nc|ENSG00000163939|Q86U86-4|PBRM1;;ENST00000480064.1_1_3:52643285-52649409:-|nuORF;;nc|ENSG00000163939|Q86U86-5|PBRM1;;nc|ENSG00000163939|Q86U86|PBRM1;;nc|ENSG00000163939|Q86U86-2|PBRM1;;nc|ENSG00000163939|Q86U86-3|PBRM1;;nc|ENSG00000163939|Q86U86-6|PBRM1;;nc|ENSG00000163939|Q86U86-9|PBRM1 5.572070916493733 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8903 48.355 139.0 492820.0 25 0 94352.0 + 16904 KIIETDFEKA 10 97 597.3239232413131 1192.633293549426 2 597.3246948122978 MULTI CID FTMS 0 0 0 8890 425953.1875 1.0 0 0.0 13 Unmodified _KIIETDFEKA_ ENSG00000141873|ENST00000269740|SLC39A3;nc|ENSG00000141873|Q9BRY0-2|SLC39A3 36.39500950444726 0.1956349533321693 4 K{I|L}{I|L}E 4 6 51.381 0.0 0.0 4.3082 0.0 0.0 0.0 706.3044527643186 706.3044527643186 21.01938285221182 0.0 0.0 0.0 0 1.325257498915995 0.7695510786217261 0.0 0.0 + K{I|L}{I|L}E 4.3082 + + 164 + 1 1.821 55757.3 1.0 4344 4557 8890 HBL1_DMSO_200M_050219_2,8903 HBL1_DMSO_200M_050219_2,8903,KIIETDFEKA False True KIIETDFEKA 48.354702 597.324694812298 2864168.25 8890.0 ENSG00000141873|ENST00000269740|SLC39A3;;nc|ENSG00000141873|Q9BRY0-2|SLC39A3 6.092188835144043 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8904 48.358 164.0 392170.0 25 0 39377.0 + 36449 SYYQSSVQY 9 89 562.7483136223401 1123.48207431148 2 562.7485839724541 MULTI CID FTMS 0 0 0 8890 373850.8125 0.3365123676577528 -2 0.2135581970214843 14 Unmodified _SYYQSSVQY_ ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5 36.12702656103203 0.0967173616627612 4 [AG]YSYS 6 7 32.722 0.0 0.0 2.9126 0.0 0.0 0.0 492.2108700480614 492.2108700480614 4.0893539297350046 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.7742275032520141 0.0 [AG]YSYS 2.9126 - 467 1 1.821 56699.9 1.0 4345 4557 8890 HBL1_DMSO_200M_050219_2,8904 HBL1_DMSO_200M_050219_2,8904,SYYQSSVQY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8905 48.362 204.0 407950.0 25 0 57220.0 28229 PQPVPGGGV 9 105 404.2212260493273 806.4278991654546 2 404.2209655642509 MULTI CID FTMS 0 0 0 8890 278167.40625 0.9216854539307776 -1 0.10992431640625 15 Unmodified _PQPVPGGGV_ ENST00000320892.10_1_2:7057533-7081179:+|nuORF 4.75600775471527 0.7486543447549536 4 [YE]{I|L}NR{I|L} 6 9 + 45.632 0.0 0.0 5.6586 5.6586 74.302 0.0 0.0 0.0 23.46787486224656 1.9429357970573025 1.9429357970573025 1.9429357970573025 0 0.0 1.6989700043360187 0.0 0.7302046884880937 [YE]{I|L}NR{I|L};[YE]{I|L}{I|L}[RN];[YE]{I|L}GGR{I|L};[YE]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}GV;[RD]{I|L}{I|L}[YQ];[VG]K{[NV]|[RG]}[YQ] 5.6586;5.4177;4.4905;3.2611;0.63929;0.38523 -;-;-;-;-;- 89 + 1 1.821 72654.1 1.0 4346 4557 8890 HBL1_DMSO_200M_050219_2,8905 HBL1_DMSO_200M_050219_2,8905,PQPVPGGGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8906 48.365 169.0 365650.0 25 0 31793.0 + 9713 AQHPNIVTV 9 100 489.2738683983632 976.5331838635263 2 489.7721435427666 MULTI CID FTMS 0 0 0 8890 195027.796875 0.1833864911845396 -10 0.9630393981933594 16 Unmodified _FLVERNTV_ nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000008128|Q9UQ88-3|CDK11A;nc|ENSG00000008128|Q9UQ88-10|CDK11A;nc|ENSG00000248333|P21127-5|CDK11B;nc|ENSG00000008128|Q9UQ88|CDK11A;ENSG00000248333|ENST00000341832|CDK11B;ENSG00000008128|ENST00000404249|CDK11A;ENST00000492390.5_1_1:1636243-1639660:-|nuORF;nc|ENSG00000248333|P21127-9|CDK11B;nc|ENSG00000248333|P21127-12|CDK11B;ENST00000598846.1_1_1:1635046-1639660:-|nuORF;nc|ENSG00000008128|Q9UQ88-4|CDK11A;ENST00000474916.1_1_1:1636243-1639664:-|nuORF;nc|ENSG00000248333|P21127|CDK11B;nc|ENSG00000248333|P21127-10|CDK11B;nc|ENSG00000248333|P21127-4|CDK11B;ENST00000468800.5_1_1:1635923-1638967:-|nuORF;nc|ENSG00000248333|P21127-3|CDK11B;nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000008128|Q9UQ88-5|CDK11A 14.581692164780916 0.6954967302934248 4 TV 2 6 20.005 0.0 0.0 2.0486 0.0 0.0 758.4062592803217 0.0 758.4062592803217 0.0 3.807196863200844 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + TV 2.0486 + + 204 + 1 1.821 55540.4 1.0 4347 4557 8890 HBL1_DMSO_200M_050219_2,8906 HBL1_DMSO_200M_050219_2,8906,FLVERNTV False False AQHPNIVTV 48.365126 489.772143542767 2282181.5 8890.0 nc|ENSG00000248333|P21127-8|CDK11B;;nc|ENSG00000008128|Q9UQ88-9|CDK11A;;nc|ENSG00000008128|Q9UQ88-3|CDK11A;;nc|ENSG00000008128|Q9UQ88-10|CDK11A;;nc|ENSG00000248333|P21127-5|CDK11B;;nc|ENSG00000008128|Q9UQ88|CDK11A;;ENSG00000248333|ENST00000341832|CDK11B;;ENSG00000008128|ENST00000404249|CDK11A;;ENST00000492390.5_1_1:1636243-1639660:-|nuORF;;nc|ENSG00000248333|P21127-9|CDK11B;;nc|ENSG00000248333|P21127-12|CDK11B;;ENST00000598846.1_1_1:1635046-1639660:-|nuORF;;nc|ENSG00000008128|Q9UQ88-4|CDK11A;;ENST00000474916.1_1_1:1636243-1639664:-|nuORF;;nc|ENSG00000248333|P21127|CDK11B;;nc|ENSG00000248333|P21127-10|CDK11B;;nc|ENSG00000248333|P21127-4|CDK11B;;ENST00000468800.5_1_1:1635923-1638967:-|nuORF;;nc|ENSG00000248333|P21127-3|CDK11B;;nc|ENSG00000248333|P21127-6|CDK11B;;nc|ENSG00000008128|Q9UQ88-5|CDK11A 7.622867266337077 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8907 48.379 800.0 82103.0 25 0 19515.0 -1 0 28 1131.1062915571883 3390.297045271765 3 1131.443408191204 MULTI CID FTMS 0 0 0 8890 103808.5625 0.7390181453411503 -2 0.2135581970214843 17 4 S 1 -1 9.732 0.0 0.0 0.28705 0.0 0.0 2147.7483915423527 1152.4916475885375 3300.24003913089 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 S 0.28705 - 11 + 1 1.821 61411.5 0.4399999976158142 4348 4557 8890 HBL1_DMSO_200M_050219_2,8907 HBL1_DMSO_200M_050219_2,8907, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8908 48.386 385.0 422770.0 25 0 30734.0 + 31906 RTVEKTWKL 9 168 387.5644010093409 1159.671373628223 3 387.5638305544853 MULTI CID FTMS 0 0 0 8890 95179.4609375 0.116894454198412 -3 0.3231163024902344 18 Unmodified _RTVEKTWKL_ ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-2|CBLB;nc|ENSG00000114423|Q13191-3|CBLB 35.995811192298525 0.0974376724572558 4 {[WT]|[RM]}VVKTWK{I|L} 9 2 + 56.143 0.0 0.0 4.8413 4.8413 68.018 0.0 0.0 0.0 0.5115252244738144 14.973024840566469 0.5115252244738144 0.5115252244738144 0 1.7104093769761877 0.0 0.4247425010840047 0.0 {[WT]|[RM]}VVKTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEKTWK{I|L};[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}KTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EVKTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTRTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTC{I|L}VQK{I|L};{[WT]|[RM]}VVKT{[DA]|[EG]}K{I|L};{[WT]|[RM]}VVKT{[SA]|[TG]}R{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEKT{[SA]|[TG]}R{I|L};[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}KT{[SA]|[TG]}R{I|L} 4.8413;4.7972;4.7869;4.6894;4.3011;4.0525;4.0473;4.0055;3.9614;3.9511 -;+;-;-;-;-;-;-;-;- + 1609 1 1.821 131149.3 1.0 4349 4557 8890 HBL1_DMSO_200M_050219_2,8908 HBL1_DMSO_200M_050219_2,8908,RTVEKTWKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8909 48.399 745.0 149280.0 25 0 12647.0 + 25378 NAYPPGDHLCF 11 131 411.8510371694557 0 411.8509094119072 PEAK CID FTMS 0 0 0 8890 91521.5078125 1.0 0 0.0 19 Unmodified _NAYPPGDHLCF_ REV__ENSG00000067704|ENST00000366922|IARS2 6.623454094837244 0.4761840153648597 4 PY 2 -1 8.5835 0.0 0.0 1.0446 0.0 0.0 70.3189112986433 488.2283114068969 558.5472227055402 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PY 1.0446 - 43 + 1 1.821 89428.0 1.0 4350 4557 8890 HBL1_DMSO_200M_050219_2,8909 HBL1_DMSO_200M_050219_2,8909,NAYPPGDHLCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8910 48.413 800.0 202540.0 25 0 12274.0 + 42999 VVVKEVVKV 9 196 499.8341696876527 997.6537864421056 2 499.8344909548759 MULTI CID FTMS 0 0 0 8890 91345.6015625 1.0 0 0.0 20 Unmodified _VVVKEVVKV_ ENSG00000167880|ENST00000301607|EVPL 59.36838082759317 0.0264317782606298 4 VVVKEVVKV 9 0 + 87.615 0.0 0.0 8.7821 8.7821 94.125 0.0 0.0 0.0 31.44971303392768 9.610819339696292 9.610819339696292 9.610819339696292 0 2.3509423880831903 1.6989700043360187 1.174742501084005 0.2215141619232908 + + VVVKEVVKV;VVVKEVVVK 8.7821;7.8187 +;- + 2033 + 1 1.821 123037.5 0.5299999713897705 4351 4557 8890 HBL1_DMSO_200M_050219_2,8910 HBL1_DMSO_200M_050219_2,8910,VVVKEVVKV True True VVVKEVVKV 48.412612 499.835 663457.125 8890.0 ENSG00000167880|ENST00000301607|EVPL 4.389169851938884 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8912 48.417 42.0 1371600.0 25 0 257240.0 + 4882 DGFQPSRSI 9 71 503.7510554878125 1005.487558042425 2 503.7509033083916 MULTI CID FTMS 0 0 0 8911 1105613.0 0.8356006588515822 -1 0.0837821960449218 1 Unmodified _DGFQPSRSI_ ENSG00000072274|ENST00000360110|TFRC;ENST00000464368.1_1_3:195789435-195792419:-|nuORF 36.12702656103203 0.0967173616627612 4 Q{I|L}{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6 8 25.265 0.0 0.0 2.5127 0.0 0.0 319.11445108328365 0.0 319.11445108328365 0.0 12.165762445130497 0.0 0.0 0 0.5 0.0 0.8252574989159953 0.6861818737241735 Q{I|L}{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.5127 - 57 + 1 1.823 48423.5 1.0 4352 4558 8911 HBL1_DMSO_200M_050219_2,8912 HBL1_DMSO_200M_050219_2,8912,DGFQPSRSI True True DGFQPSRSI 48.417391 503.750903308392 14626712.0 8911.0 ENST00000464368.1_1_3:195789435-195792419:-|nuORF;;ENSG00000072274|ENST00000360110|TFRC -0.4409498373667399 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8913 48.419 28.0 1570800.0 25 0 87645.0 25739 NINNLKFY 8 86 513.2755038627093 1024.5364547922186 2 514.2827026247978 MULTI CID FTMS 0 0 0 8911 721561.5625 0.6791789295537874 -1 0.0837821960449218 2 Unmodified _NINNLKFY_ ENST00000580156.1_1_17:29599642-29624196:-|nuORF 9.347437153973935 0.7675937258251505 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NP]{I|L}VND 8 5 28.849 0.0 0.0 2.8159 0.0 0.0 0.0 109.08098539208108 109.08098539208108 13.364875295848435 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NP]{I|L}VND 2.8159 - 140 1 1.823 41666.4 1.0 4353 4558 8911 HBL1_DMSO_200M_050219_2,8913 HBL1_DMSO_200M_050219_2,8913,NINNLKFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8914 48.421 110.0 666420.0 25 0 144670.0 + 45962 YYYNGKAVY 9 86 570.771447722867 1139.528342512534 2 570.7717773318291 MULTI CID FTMS 0 0 0 8911 653171.1875 0.1404579508577624 -3 0.2973403930664062 3 Unmodified _YYYNGKAVY_ ENST00000563760.5_1_18:52921909-52988969:-|nuORF;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-6|TCF4 39.957323273325 0.0756908302845263 4 [KG]NYAVYYY 9 7 + 51.613 0.0 0.0 4.5294 4.5294 68.111 0.0 0.0 0.0 3.0026697949782744 16.478174818886373 3.0026697949782744 1.2371250542002343 0 0.4247425010840047 0.0 0.0 1.3243923658886183 [KG]NYAVYYY;[KG]NAYVYYY;[YN]GKAVYYY;[KG]NAVYYYY;[KG]NYAYVYY;[KG]NYAYYVY;[KG]NAYYVYY;[KG]NAYYYVY;[YN]GKAYVYY;[YN]GKAYYVY 4.5294;4.4208;4.2659;4.1674;4.0358;4.0358;3.9272;3.9272;3.7723;3.7723 -;-;-;-;-;-;-;-;-;- 431 1 1.823 59893.4 1.0 4354 4558 8911 HBL1_DMSO_200M_050219_2,8914 HBL1_DMSO_200M_050219_2,8914,YYYNGKAVY True True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 8915 48.425 209.0 418930.0 25 0 35154.0 + + 11238 EPSAGIPKV 9 114 448.8531184413945 1343.5375259243835 3 448.8534728884697 MULTI CID FTMS 0 0 0 8911 305820.8125 1.0 0 0.0 4 Unmodified _GEQLHCGHDWY_ nc|ENSG00000117523|Q9Y520|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C 11.494710602746466 0.7960433852372589 4 PSPSRDANY 9 -1 29.65 0.0 0.0 2.2068 0.0 0.0 338.11060854813894 0.0 338.11060854813894 0.0 10.332106123571148 0.0 0.0 0 0.218765315847925 0.0 0.0 0.6861818737241735 PSPSRDANY 2.2068 - 1186 + 1 1.823 73475.1 1.0 4355 4558 8911 HBL1_DMSO_200M_050219_2,8915 HBL1_DMSO_200M_050219_2,8915,GEQLHCGHDWY False False EPSAGIPKV 48.424862 448.85347288847 482378.375 8911.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 2.7212069034576416 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8916 48.429 202.0 285060.0 25 0 34788.0 + 5766 DPPDGIKV 8 87 420.7265342156436 839.4385154980872 2 421.2281677126884 MULTI CID FTMS 0 0 0 8911 174284.546875 0.2540149961203894 11 -0.7156562805175781 5 Unmodified _DPPDGIKV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 23.1484247019978 0.5573009939494978 4 [DP]G{I|L}K 5 3 38.188 0.0 0.0 4.5492 0.0 0.0 0.0 326.1370683147466 326.1370683147466 24.47621246364342 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + [DP]G{I|L}K 4.5492 + + 60 1 1.823 51225.0 1.0 4356 4558 8911 HBL1_DMSO_200M_050219_2,8916 HBL1_DMSO_200M_050219_2,8916,DPPDGIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8917 48.436 384.0 135230.0 25 0 11842.0 25867 NLFEEQERQER 11 87 739.3548992854519 1476.6952456377037 2 739.3552123904228 MULTI CID FTMS 0 0 0 8911 160287.828125 0.4581087503218642 -1 0.0837821960449218 6 Unmodified _NLFEEQERQER_ ENSG00000135148|ENST00000412615|TRAFD1 11.494710602746466 0.7960433852372589 4 {[QV]|[N{I|L}]|[RA]|[KV]}NAD 5 9 48.5 0.0 0.0 3.2844 0.0 0.0 0.0 946.4380676592556 946.4380676592556 21.359921914233908 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.3054621874040891 {[QV]|[N{I|L}]|[RA]|[KV]}NAD 3.2844 - 322 + 1 1.823 42611.8 1.0 4357 4558 8911 HBL1_DMSO_200M_050219_2,8917 HBL1_DMSO_200M_050219_2,8917,NLFEEQERQER False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8918 48.441 313.0 418060.0 25 0 34497.0 + 29252 QGYRMPRV 8 136 336.1802057734825 1005.5187879206476 3 336.1803466677666 MULTI CID FTMS 0 0 0 8911 158547.640625 0.4729372772703163 -14 1.3413848876953125 7 Unmodified _QGYRMPRV_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 9.38312468134398 0.7673771031149565 4 QV 2 6 21.146 0.0 0.0 2.103 0.0 0.0 0.0 775.3679965554124 775.3679965554124 7.973827724139374 0.0 0.0 0.0 0 0.0 0.494850021680094 0.0 0.0 QV 2.103 - 113 + 1 1.823 106847.8 1.0 4358 4558 8911 HBL1_DMSO_200M_050219_2,8918 HBL1_DMSO_200M_050219_2,8918,QGYRMPRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8919 48.446 242.0 321250.0 25 0 37234.0 2607 ASPEHCPLS 9 123 470.7138037318823 939.4130545305646 2 470.7138854861259 MULTI CID FTMS 0 0 0 8911 152331.6875 0.6546471981332147 -2 0.1937065124511718 8 Unmodified _ASPEHCPLS_ ENSG00000159433|ENST00000290607|STARD9 15.847184025352805 0.4077185912009129 4 {[SA]|[TG]}[HC]PE{I|L}[PS] 9 4 + 30.391 0.0 0.0 3.2351 3.2351 68.913 0.0 0.0 0.0 3.802112417116064 7.147642715192507 3.802112417116064 3.802112417116064 0 0.0 1.3010299956639813 0.4247425010840047 0.0 {[SA]|[TG]}[HC]PE{I|L}[PS];{[DA]|[EG]}[DP]PE{I|L}[PS];[TP][C(Carbamidomethyl (C))H]E{I|L}[PS];{[SA]|[TG]}[EP][HC]{I|L}[PS];[TP]AD[HC]{I|L}[PS];{[DA]|[EG]}[TP][HC]{I|L}[PS];{[SA]|[TG]}[{M(Oxidation (M))|F}E][R{M(Oxidation (M))|F}][PS];[TA]PD[HC]{I|L}[PS];{[WT]|[RM]}{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}][PS];{[DA]|[EG]}[{M(Oxidation (M))|F}T][R{M(Oxidation (M))|F}][PS] 3.2351;2.8304;2.0864;1.9832;1.8633;1.5785;0.46657;0.39832;0.35316;0.061838 -;-;-;-;-;-;-;-;-;- 250 1 1.823 61481.3 1.0 4359 4558 8911 HBL1_DMSO_200M_050219_2,8919 HBL1_DMSO_200M_050219_2,8919,ASPEHCPLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8920 48.455 498.0 260830.0 25 0 42627.0 27965 PLVRSPSL 8 111 434.76587112779487 867.5171893223898 2 434.7663146853447 MULTI CID FTMS 0 0 0 8911 146188.78125 0.2451029098354042 18 -1.2794570922851562 9 Unmodified _PLVRSPSL_ ENSG00000120645|ENST00000538872|IQSEC3;nc|ENSG00000120645|Q9UPP2-2|IQSEC3 28.486842064014134 0.4448922141344407 4 {I|L}PP 3 6 44.679 0.0 0.0 5.1502 0.0 0.0 0.0 557.3069552057249 557.3069552057249 10.496416010867108 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 {I|L}PP 5.1502 - 101 + 1 1.823 102744.2 1.0 4360 4558 8911 HBL1_DMSO_200M_050219_2,8920 HBL1_DMSO_200M_050219_2,8920,PLVRSPSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8921 48.46 278.0 207700.0 25 0 14377.0 23331 LTATALATSL 10 101 481.2819315192518 960.5493101053036 2 481.2818786501884 MULTI CID FTMS 0 0 0 8911 132463.8125 0.2697486229675427 2 -0.1720771789550781 10 Unmodified _LTATALATSL_ ENST00000432176.6_1_7:22983570-22983795:-|nuORF 18.1463463914782 0.5430639438673815 4 EQAARV 6 8 34.162 0.0 0.0 3.5565 0.0 0.0 288.1955636226849 0.0 288.1955636226849 0.0 12.435464932947724 0.0 0.0 0 0.0 0.0 0.0 0.2302046884880938 EQAARV 3.5565 - 183 + 1 1.823 50175.4 1.0 4361 4558 8911 HBL1_DMSO_200M_050219_2,8921 HBL1_DMSO_200M_050219_2,8921,LTATALATSL False True TAIETKVTV 48.459755 481.281878650188 3103696.5 8911.0 ENSG00000112297|ENST00000633556|CRYBG1;;nc|ENSG00000112297|Q9Y4K1-1|CRYBG1 0.3339005311330159 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8922 48.467 414.0 312700.0 25 0 39661.0 + 9468 FLDEKTHEL 9 161 377.8593872137653 1130.556332241496 3 377.8611633181572 MULTI CID FTMS 0 0 0 8911 112455.1640625 0.9409431905227024 -1 0.0837821960449218 11 Unmodified _FLDEKTHEL_ ENSG00000129317|ENST00000344862|PUS7L 41.95555342248728 0.0647214845423414 4 {NN|[MP]|[D{I|L}]|[EV]}[RN]KED{I|L}E 9 7 + 54.827 0.0 0.0 4.8495 4.8495 81.986 0.0 0.0 0.0 7.515669194269989 36.84266938503399 7.515669194269989 9.788107009300616 0 0.2396518287104437 1.154901959985743 0.7742275032520141 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}[RN]KED{I|L}E;{[QN]|[E{I|L}]|[KN]}QQKED{I|L}E;{M(Oxidation (M))|F}{I|L}DEK[VS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};AAPCRKED{I|L}E;[VP][NS]TKED{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}[RN]WW{I|L}E;AAP{[SA]|[TG]}TKED{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}[RN][QP]{M(Oxidation (M))|F}{I|L}E;{[TV]|[{I|L}S]}[YN]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}E;{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}D[YT]NV 4.8495;3.9837;3.4512;3.3944;3.2302;2.9849;2.9786;2.8696;2.6653;2.301 -;-;-;-;-;-;-;-;-;- 712 1 1.823 107677.1 1.0 4362 4558 8911 HBL1_DMSO_200M_050219_2,8922 HBL1_DMSO_200M_050219_2,8922,FLDEKTHEL True True FLDEKTHEL 48.467141 377.861163318157 1030034.1875 8911.0 ENSG00000129317|ENST00000344862|PUS7L 4.565663496653239 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8923 48.481 800.0 101370.0 25 0 6810.0 + 5623 DPCIYKFYEFY 11 93 744.3307048317296 1486.646856730259 2 744.3336059451103 MULTI CID FTMS 0 0 0 8911 109630.546875 0.2315228170756729 -9 0.8480644226074219 12 Unmodified _DPCIYKFYEFY_ REV__ENSG00000163840|ENST00000296161|DTX3L 5.731851221503515 0.8481046878870278 4 {[QN]|[E{I|L}]|[KN]}W{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F}Y 12 -1 + 59.985 0.0 0.0 4.0349 4.0349 66.095 0.0 0.0 0.0 1.1394335230683694 7.064304893988151 1.1394335230683694 1.1394335230683694 0 0.8182503180159344 0.0 0.0 1.0709991640913 {[QN]|[E{I|L}]|[KN]}W{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[DA]|[EG]}E{I|L}{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}W{[MS]|[{M(Oxidation (M))|F}A]}AQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}W{[MS]|[{M(Oxidation (M))|F}A]}AQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}W{[MS]|[{M(Oxidation (M))|F}A]}A[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F}Y 4.0349;3.9583;3.714;3.6299;3.5617;3.4229;3.4229;3.4229;3.348;3.348 -;-;-;-;-;-;-;-;-;- 1019 1 1.823 63134.7 0.5899999737739563 4363 4558 8911 HBL1_DMSO_200M_050219_2,8923 HBL1_DMSO_200M_050219_2,8923,DPCIYKFYEFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8924 48.496 800.0 87411.0 25 0 4411.9 + -1 PFWMCSAGEPY 11 91 672.7748065167681 1343.535060100336 2 672.7770263552666 MULTI CID FTMS 0 0 0 8911 93551.1171875 1.0 0 0.0 13 Carbamidomethyl (C) _PFWMC(Carbamidomethyl (C))SAGEPY_ REV__ENSG00000138646|ENST00000264350|HERC5;REV__ENST00000502913.1_1_4:89394186-89425581:+|nuORF;REV__ENST00000510223.5_1_4:89394995-89425581:+|nuORF 13.042465956692816 0.7638483625850725 4 E[NG]K[DP]SPEY 10 -1 43.716 0.0 0.0 3.2538 0.0 0.0 209.06306684175092 0.0 209.06306684175092 0.0 20.41502966049709 0.0 0.0 0 1.774227503252014 0.0 1.1237125054200234 0.0 E[NG]K[DP]SPEY 3.2538 - 579 + 1 1.823 57225.8 0.5899999737739563 4364 4558 8911 HBL1_DMSO_200M_050219_2,8924 HBL1_DMSO_200M_050219_2,8924,PFWMCSAGEPY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8925 48.51 800.0 178590.0 25 0 16981.0 + 32463 SAGPVHPLV 9 155 438.7504394072191 875.4863258812381 2 438.7505065798759 MULTI CID FTMS 0 0 0 8911 94615.546875 0.7176607090688975 -2 0.1937065124511718 14 Unmodified _SAGPVHPLV_ ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE 40.44857923139169 0.0729940656229577 4 {[SA]|[TG]}GPVHP{I|L}V 9 0 + 47.622 0.0 0.0 5.4395 5.4395 77.357 0.0 0.0 0.0 12.956254457863992 4.191293077419758 4.191293077419758 4.191293077419758 0 0.7302046884880937 2.0 0.0 0.0 + + {[SA]|[TG]}GPVHP{I|L}V;{[SA]|[TG]}GPVHPV{I|L};{[SA]|[TG]}GPVH[{I|L}V]P;{[SA]|[TG]}GPVV[{I|L}P]H;{[SA]|[TG]}GPVV[H{I|L}]P;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}C(Carbamidomethyl (C))P{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}PGC{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}PC(Carbamidomethyl (C)){I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}C(Carbamidomethyl (C))PV{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}PGCV{I|L} 5.4395;4.9608;4.366;3.3158;3.2761;1.5798;1.4231;1.2359;1.101;0.94433 +;-;-;-;-;-;-;-;-;- + 381 + 1 1.823 113053.8 0.5 4365 4558 8911 HBL1_DMSO_200M_050219_2,8925 HBL1_DMSO_200M_050219_2,8925,SAGPVHPLV True True SAGPVHPLV 48.509815 438.750506579876 1107209.375 8911.0 ENSG00000142599|ENST00000400908|RERE;;nc|ENSG00000142599|Q9P2R6-2|RERE 6.849308490753174 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8927 48.514 4.4 11784000.0 25 0 1725400.0 + 16119 ITSSAVTTALK 11 65 546.3188919771992 1090.6232310211983 2 546.3193847537041 MULTI CID FTMS 0 0 0 8926 14057167.0 1.0 0 0.0 1 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 48.07275321834293 0.1283031204265279 4 {I|L}TSSAVTTA{I|L}K 11 0 + 104.8 0.0 0.0 9.6088 9.6088 97.649 0.0 0.0 0.0 87.76207232615569 12.6233482644911 12.6233482644911 22.31608586905513 0 0.4247425010840047 2.0 0.805462187404089 0.0 + + {I|L}TSSAVTTA{I|L}K;{I|L}TS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TTA{I|L}K 9.6088;7.5626 +;- + 100 + 1 1.823 44462.7 1.0 4366 4559 8926 HBL1_DMSO_200M_050219_2,8927 HBL1_DMSO_200M_050219_2,8927,ITSSAVTTALK False True ITSSAVTTALK 48.514319 546.319384753704 399277406.25 8926.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 11.202540079752604 2.0 True 11.0 False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 8928 48.517 103.0 713160.0 25 0 62623.0 + 31607 RQVPKLLSA 9 85 506.3190569067542 1010.6235608803084 2 506.3192016482353 MULTI CID FTMS 0 0 0 8926 694159.0625 0.6974137617610585 1 -0.07489013671875 2 Unmodified _RQVPKLLSA_ ENSG00000070785|ENST00000360403|EIF2B3;nc|ENSG00000070785|Q9NR50-2|EIF2B3;nc|ENSG00000070785|Q9NR50-3|EIF2B3 38.17557092003332 0.0854718145212029 4 {[{M(Oxidation (M))|F}H]|[RQ]}V[KP]{I|L}{I|L}SA 9 0 + 51.405 0.0 0.0 5.0864 5.0864 84.021 0.0 0.0 0.0 4.762036441594191 31.9408341705779 4.762036441594191 12.58478465655137 0 1.3807196863200843 0.0 0.0 0.3494850021680094 + + {[{M(Oxidation (M))|F}H]|[RQ]}V[KP]{I|L}{I|L}SA;{I|L}{I|L}[KP][RN]{I|L}SA;[KP]{I|L}{I|L}[RN]{I|L}SA;{[{M(Oxidation (M))|F}H]|[RQ]}V[KP]S{I|L}{I|L}A 5.0864;3.8412;2.1148;2.0011 +;-;-;- + 101 1 1.823 61736.6 1.0 4367 4559 8926 HBL1_DMSO_200M_050219_2,8928 HBL1_DMSO_200M_050219_2,8928,RQVPKLLSA True True RQVPKLLSA 48.516521 506.319201648235 14628965.0 8926.0 nc|ENSG00000070785|Q9NR50-2|EIF2B3;;nc|ENSG00000070785|Q9NR50-3|EIF2B3;;ENSG00000070785|ENST00000360403|EIF2B3 4.925671577453613 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8929 48.518 58.0 957560.0 25 0 184940.0 + 12414 GTITTFEHA 9 84 488.7404375874658 975.4663222417316 2 488.7404968142509 MULTI CID FTMS 0 0 0 8926 784253.25 0.135337005867743 -4 0.3945274353027344 3 Unmodified _GTITTFEHA_ ENSG00000167658|ENST00000309311|EEF2 39.957323273325 0.0756908302845263 4 [{I|L}T]GTT{M(Oxidation (M))|F}EAH 9 4 [{I|L}T]G + + 37.318 28.676 10.576 3.8256 3.8256 48.098 0.0 0.0 0.0 0.0 8.641654967101367 0.0 0.0 0 0.3494850021680094 0.0 0.805462187404089 0.0 [{I|L}T]GTT{M(Oxidation (M))|F}EAH 3.8256 - 191 + 1 1.823 49222.2 1.0 4368 4559 8926 HBL1_DMSO_200M_050219_2,8929 HBL1_DMSO_200M_050219_2,8929,GTITTFEHA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8930 48.52 103.0 648520.0 25 0 63942.0 -1 MLLPGDKI 8 97 451.7527688641812 901.4909847951624 2 451.7526733279228 MULTI CID FTMS 0 0 0 8926 456235.3125 0.8312485025657937 5 -0.2750930786132812 4 Oxidation (M) _M(Oxidation (M))LLPGDKI_ ENSG00000257743|ENST00000477922|MGAM2 18.13498045792455 0.6430038125133779 4 YP{I|L} 3 -1 47.435 0.0 0.0 5.2618 0.0 0.0 0.0 525.2690523736936 525.2690523736936 31.72167511924052 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YP{I|L} 5.2618 - 231 + 1 1.823 55838.5 1.0 4369 4559 8926 HBL1_DMSO_200M_050219_2,8930 HBL1_DMSO_200M_050219_2,8930,MLLPGDKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8931 48.523 113.0 408530.0 25 0 34195.0 21715 LPLSSHPHV 9 87 493.77446080257823 985.5343686719564 2 493.7735778689384 MULTI CID FTMS 0 0 0 8926 425360.21875 0.8896274604573584 1 -0.07489013671875 5 Unmodified _LPLSSHPHV_ ENST00000597008.5_1_19:4100806-4102439:-|nuORF 24.67388899826682 0.2172451872415813 4 HSAPV 5 6 15.495 0.0 0.0 1.5722 0.0 0.0 476.2706490448065 0.0 476.2706490448065 0.0 -0.5801235689986406 -0.5801235689986406 0.0 0 0.0 0.0 0.0 0.0 HSAPV 1.5722 - 102 + 1 1.823 39848.4 1.0 4370 4559 8926 HBL1_DMSO_200M_050219_2,8931 HBL1_DMSO_200M_050219_2,8931,LPLSSHPHV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8932 48.525 137.0 670570.0 25 0 104020.0 + 24392 MFPEHAVKAY 10 106 398.1988416358539 1191.5746955077618 3 398.1992370486259 MULTI CID FTMS 0 0 0 8926 384400.125 0.7585818209916951 1 -0.07489013671875 6 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 22.736283301280096 0.4578556481593033 4 {[YD]|[{M(Oxidation (M))|F}M]}[EP]HAVKAY 10 0 + 20.934 0.0 0.0 1.7569 1.7569 44.434 0.0 0.0 0.0 0.0 10.831850093146445 0.0 0.0 0 0.0 0.0 0.0 0.0 + + {[YD]|[{M(Oxidation (M))|F}M]}[EP]HAVKAY;[NS][R{M(Oxidation (M))|F}]HAVKAY;{[YD]|[{M(Oxidation (M))|F}M]}Y[RD]VKAY 1.7569;1.7569;1.5651 +;-;- + 181 + 1 1.823 77435.9 1.0 4371 4559 8926 HBL1_DMSO_200M_050219_2,8932 HBL1_DMSO_200M_050219_2,8932,MFPEHAVKAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8933 48.528 144.0 561110.0 25 0 48466.0 + -1 IIKMYQQI 8 82 526.7950820074403 1051.5756110816806 2 526.7963134646416 MULTI CID FTMS 0 0 0 8926 378925.53125 0.6059512731025595 -2 0.18096923828125 7 Oxidation (M) _IIKM(Oxidation (M))YQQI_ REV__ENSG00000170606|ENST00000304858|HSPA4;REV__ENST00000514825.1_1_5:132437411-132440125:+|nuORF 16.942295170755138 0.6606234159769251 4 {[DA]|[EG]}[R{I|L}]S{I|L}HQ{I|L} 9 -1 + 62.371 0.0 0.0 5.9312 5.9312 85.411 0.0 0.0 0.0 9.731975075880328 16.478174818886373 9.731975075880328 9.208187539523747 0 0.5709991640913001 1.3979400086720375 0.3807196863200844 0.0 {[DA]|[EG]}[R{I|L}]S{I|L}HQ{I|L};{[DA]|[EG]}[R{I|L}]S{I|L}H[AG]{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}HQ{I|L};{I|L}E[PG]{I|L}[WP]Q{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}H[AG]{I|L};{I|L}E[{I|L}P]G[WP]Q{I|L};{I|L}E[TA][H{I|L}]QQ{I|L};{I|L}[WP]{I|L}[WP]Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H{I|L}[WP]Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H{I|L}[WP][AG]{I|L} 5.9312;5.0555;5.0057;4.4884;4.13;3.9158;3.5809;2.8037;2.6145;1.3298 -;-;-;-;-;-;-;-;-;- 144 1 1.823 67959.7 1.0 4372 4559 8926 HBL1_DMSO_200M_050219_2,8933 HBL1_DMSO_200M_050219_2,8933,IIKMYQQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8934 48.531 153.0 414620.0 25 0 29688.0 + 29824 QQIGKVVQV 9 115 499.80351785085446 997.592482768509 2 499.8032409548759 MULTI CID FTMS 0 0 0 8926 262219.1875 0.1986676998348439 -4 0.3945274353027344 8 Unmodified _QQLGKVVQV_ ENSG00000161970|ENST00000648839|RPL26;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;ENSG00000037241|ENST00000265100|RPL26L1 26.88365393820708 0.1891292719743517 4 [AG]VPA 5 7 21.972 0.0 0.0 2.2025 0.0 0.0 0.0 599.3516434953245 599.3516434953245 6.7951097132083405 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [AG]VPA 2.2025 - 587 1 1.823 52695.7 1.0 4373 4559 8926 HBL1_DMSO_200M_050219_2,8934 HBL1_DMSO_200M_050219_2,8934,QQLGKVVQV False True QQIGKVVQV 48.531213 499.803240954876 18684848.0 8926.0 ENSG00000161970|ENST00000648839|RPL26;;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;;ENSG00000037241|ENST00000265100|RPL26L1 6.234036445617676 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8935 48.535 199.0 249610.0 25 0 12270.0 + 31202 RLQEEINEV 9 90 565.2963493705629 1128.5781458079257 2 565.2950927615166 MULTI CID FTMS 0 0 0 8926 151536.265625 0.8787646634129227 -2 0.18096923828125 9 Unmodified _RLQEEINEV_ nc|ENSG00000166130|Q70UQ0-2|IKBIP;nc|ENSG00000166130|Q70UQ0|IKBIP 14.40537977576856 0.4467465336100671 4 {NN|[MP]|[D{I|L}]|[EV]}DRR{I|L}NEV 9 4 + 49.97 0.0 0.0 4.4277 4.4277 77.1 0.0 0.0 0.0 5.016121490133543 22.47347713643002 5.016121490133543 7.746134210770919 0 0.0 1.0 0.2059771852360797 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}DRR{I|L}NEV;AA[RV]EE{I|L}NEV;{NN|[MP]|[D{I|L}]|[EV]}DRR{I|L}GGEV;AA[RV]EE{I|L}GGEV;{[QV]|[N{I|L}]|[RA]|[KV]}[W{I|L}]E{I|L}NEV;[YT][YK]EVVEV;{[QV]|[N{I|L}]|[RA]|[KV]}[W{I|L}]E{I|L}GGEV;{[QD]|[EN]|[WG]|[KD]|[RS]}RR{[NV]|[RG]}NEV;{[QD]|[EN]|[WG]|[KD]|[RS]}RREVVEV;{[QD]|[EN]|[WG]|[KD]|[RS]}RRE[EP]TV 4.4277;3.7413;3.6118;2.9293;2.8974;2.8256;2.0815;1.7993;1.5326;0.57588 -;-;-;-;-;-;-;-;-;- 311 1 1.823 43977.8 1.0 4374 4559 8926 HBL1_DMSO_200M_050219_2,8935 HBL1_DMSO_200M_050219_2,8935,RLQEEINEV False True RLQEEINEV 48.53503 565.295092761517 1248338.75 8926.0 nc|ENSG00000166130|Q70UQ0-2|IKBIP;;nc|ENSG00000166130|Q70UQ0|IKBIP 4.351840496063232 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 8936 48.549 800.0 206160.0 25 0 18124.0 + 24395 MFPEHAVKAY 10 161 596.7951457427107 1191.5757385522213 2 596.7949096560478 MULTI CID FTMS 0 0 0 8926 141005.625 0.8074800594204307 1 -0.07489013671875 10 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 38.17557092003332 0.1768326257063233 4 {[YD]|[{M(Oxidation (M))|F}M]}PE[HA]VKAY 10 0 + 41.189 0.0 0.0 3.4567 3.4567 73.233 0.0 0.0 0.0 0.5052155105550327 9.268542752218345 0.5052155105550327 6.985067893138961 0 1.055462187404089 0.0 0.0 0.0 + + {[YD]|[{M(Oxidation (M))|F}M]}PE[HA]VKAY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}[YG]VKAY;{[YD]|[{M(Oxidation (M))|F}M]}PE[HA]VY[KA];{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}[YR]KAY;{[YD]|[{M(Oxidation (M))|F}M]}[DV][YG]VKAY;{[ES]|[DT]|[{I|L}C]}E{M(Oxidation (M))|F}[YG]VY[KA];{[YD]|[{M(Oxidation (M))|F}M]}[DV][YR]KAY;{[ES]|[DT]|[{I|L}C]}[C(Carbamidomethyl (C))K][HA]VKAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EE[YR]KAY;{[YD]|[{M(Oxidation (M))|F}M]}PE[HA][K{I|L}]GY 3.4567;2.8705;2.5397;2.4498;2.2658;1.9535;1.845;1.8162;1.7791;1.6282 +;-;-;-;-;-;-;-;-;- + 2280 + 1 1.823 124554.3 0.699999988079071 4375 4559 8926 HBL1_DMSO_200M_050219_2,8936 HBL1_DMSO_200M_050219_2,8936,MFPEHAVKAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8937 48.557 463.0 216160.0 25 0 31354.0 45308 YSFLHDSQT 9 113 549.2482242721514 1096.4818956111028 2 549.2489501833916 MULTI CID FTMS 0 0 0 8926 134441.53125 0.7603974875466993 -1 0.0971870422363281 11 Unmodified _YSFLHDSQT_ ENSG00000136488|ENST00000316193|CSH1;ENSG00000204414|ENST00000309894|CSHL1;ENSG00000213218|ENST00000392886|CSH2;nc|ENSG00000213218|P0DML3-2|CSH2 19.256988751693697 0.3154191944385105 4 SST{M(Oxidation (M))|F}[MT] 6 7 42.708 0.0 0.0 3.895 0.0 0.0 424.2066822736344 0.0 424.2066822736344 0.0 28.605384569831 0.0 0.0 0 0.805462187404089 0.0 0.7742275032520141 0.0 SST{M(Oxidation (M))|F}[MT] 3.895 - 817 1 1.823 79942.4 1.0 4376 4559 8926 HBL1_DMSO_200M_050219_2,8937 HBL1_DMSO_200M_050219_2,8937,YSFLHDSQT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8938 48.571 800.0 93439.0 25 0 5220.5 25855 NLEAWRETFPQ 11 97 695.8397078187427 0 695.8400756716728 PEAK CID FTMS 0 0 0 8926 100138.421875 1.0 0 0.0 12 Unmodified _NLEAWRETFPQ_ ENSG00000115705|ENST00000329066|TPO;nc|ENSG00000115705|P07202-2|TPO;nc|ENSG00000115705|P07202-3|TPO;nc|ENSG00000115705|P07202-4|TPO;nc|ENSG00000115705|P07202-5|TPO;nc|ENSG00000115705|P07202-7|TPO;nc|ENSG00000115705|P07202-8|TPO 24.99096001346401 0.2903797476557471 4 NADQ 4 8 31.67 0.0 0.0 2.279 0.0 0.0 227.129738981744 731.3494356744749 958.4791746562188 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.3494850021680094 NADQ 2.279 - 71 + 1 1.823 59957.7 0.5899999737739563 4377 4559 8926 HBL1_DMSO_200M_050219_2,8938 HBL1_DMSO_200M_050219_2,8938,NLEAWRETFPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8939 48.585 800.0 93104.0 25 0 6885.3 45376 YSWSFCSWNRQ 11 111 732.3129949829067 1462.6114370326134 2 732.3149291872978 MULTI CID FTMS 0 0 0 8926 92058.5234375 1.0 0 0.0 13 Unmodified _YSWSFCSWNRQ_ ENST00000312814.10_1_7:112424554-112424737:-|nuORF 8.745405648335112 0.8338865417133445 4 [AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y 13 12 + 81.591 0.0 0.0 5.5784 5.5784 77.22 0.0 0.0 0.0 3.679767852945943 10.696083918116416 3.679767852945943 3.679767852945943 0 0.8182503180159344 1.3979400086720375 0.7742275032520141 1.0941876774005248 [AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQQGGA{M(Oxidation (M))|F}Y;[AG]N[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EA[AG]QNA{M(Oxidation (M))|F}Y 5.5784;5.3268;5.2591;4.9726;4.9581;4.9581;4.9581;4.7066;4.7066;4.7066 -;-;-;-;-;-;-;-;-;- 979 1 1.823 58580.1 0.5600000023841858 4378 4559 8926 HBL1_DMSO_200M_050219_2,8939 HBL1_DMSO_200M_050219_2,8939,YSWSFCSWNRQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8941 48.595 369.0 204250.0 25 0 26759.0 -1 RWWYWPMS 8 82 614.2756688166868 1226.5367847001737 2 614.2761718630791 MULTI CID FTMS 0 0 0 8940 216574.84375 0.7393168930575593 1 -0.0421066284179687 1 Oxidation (M) _RWWYWPM(Oxidation (M))S_ ENST00000584716.1_1_17:30815096-30816294:+|nuORF 13.50788311687929 0.7113601687236069 4 {I|L}PS{M(Oxidation (M))|F} 4 -1 48.245 0.0 0.0 3.9335 0.0 0.0 764.3205374272615 0.0 764.3205374272615 0.0 21.7491025745376 0.0 0.0 0 0.8807196863200843 0.0 0.75 0.0 {I|L}PS{M(Oxidation (M))|F} 3.9335 - 83 + 1 1.827 60360.9 1.0 4379 4560 8940 HBL1_DMSO_200M_050219_2,8941 HBL1_DMSO_200M_050219_2,8941,RWWYWPMS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8942 48.597 121.0 728140.0 25 0 47445.0 + 3567 DAAAKALRI 9 99 464.7824776441763 927.5504023551526 2 464.7845336794853 MULTI CID FTMS 0 0 0 8940 295403.40625 0.0547896236715895 -5 0.4694175720214844 2 Unmodified _DAAAKALRI_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 60.07390631473393 0.0260411565414776 4 DAAAKA{I|L}R{I|L} 9 0 + 83.344 0.0 0.0 8.9854 8.9854 91.251 0.0 0.0 0.0 46.96903459784544 8.729174216431801 8.729174216431801 7.786596949921218 0 1.7059771852360797 1.6989700043360187 0.0 0.2742275032520141 + + DAAAKA{I|L}R{I|L};DAAAK{I|L}AR{I|L};DAAA{I|L}KAR{I|L};DAA{I|L}AKAR{I|L};DA{I|L}AAKAR{I|L};WAARRR{I|L};D{[NV]|[RG]}KA{I|L}R{I|L};{I|L}DAAAKAR{I|L};WARRAR{I|L};D{I|L}AAAKAR{I|L} 8.9854;8.1459;7.4968;6.8216;5.7682;4.3059;3.6802;3.2076;3.2017;2.8831 +;-;-;-;-;-;-;-;-;- + 335 + 1 1.827 71140.6 1.0 4380 4560 8940 HBL1_DMSO_200M_050219_2,8942 HBL1_DMSO_200M_050219_2,8942,DAAAKALRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8943 48.602 272.0 261000.0 25 0 22317.0 38663 TTKIGHLSEVK 11 105 404.9042545783109 1211.6909343351329 3 404.9042846560478 MULTI CID FTMS 0 0 0 8940 216703.328125 1.0 0 0.0 3 Unmodified _TTKIGHLSEVK_ ENST00000309594.4_1_13:21751731-21751851:+|nuORF 23.78978130925829 0.5336113198261219 4 TT{I|L}KY{I|L} 6 7 56.617 0.0 0.0 4.6726 0.0 0.0 0.0 489.2464388483032 489.2464388483032 34.847494961522145 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 TT{I|L}KY{I|L} 4.6726 - 406 + 1 1.827 58734.7 1.0 4381 4560 8940 HBL1_DMSO_200M_050219_2,8943 HBL1_DMSO_200M_050219_2,8943,TTKIGHLSEVK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8944 48.613 599.0 231420.0 25 0 15629.0 + 44804 YPNGHFVRV 9 168 363.5264103029485 1087.5574015090456 3 363.8563720583916 MULTI CID FTMS 0 0 0 -1 0 4 Unmodified _YPNGHFVRV_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 10.073929032068715 0.563993802247229 4 N{M(Oxidation (M))|F}{I|L}{[HG]|PP}RV{M(Oxidation (M))|F}V 9 5 + 27.01 0.0 0.0 2.4836 2.4836 63.487 0.0 0.0 0.0 8.549793127114288 5.60788741577753 5.60788741577753 1.76091259055681 0 0.0 0.0 0.0 0.0 N{M(Oxidation (M))|F}{I|L}{[HG]|PP}RV{M(Oxidation (M))|F}V;N{M(Oxidation (M))|F}{I|L}{[HG]|PP}VR{M(Oxidation (M))|F}V;N{M(Oxidation (M))|F}{I|L}{[HG]|PP}V{M(Oxidation (M))|F}RV;N{M(Oxidation (M))|F}{I|L}{[HG]|PP}{M(Oxidation (M))|F}VRV;N{M(Oxidation (M))|F}K[HV]V[MT]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{[HG]|PP}RV{M(Oxidation (M))|F}V;N[RD]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}VRV;[C(Carbamidomethyl (C))K]P{I|L}{[C(Carbamidomethyl (C))G]|[NC]}VRV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{[HG]|PP}VR{M(Oxidation (M))|F}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{[HG]|PP}V{M(Oxidation (M))|F}RV 2.4836;2.3216;2.2746;1.7938;1.3243;1.1511;1.062;1.062;0.98921;0.94217 -;-;-;-;-;-;-;-;-;- 679 + 1 1.827 119262.0 1.0 4382 4560 8940 HBL1_DMSO_200M_050219_2,8944 HBL1_DMSO_200M_050219_2,8944,YPNGHFVRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8945 48.627 800.0 151800.0 25 0 14430.0 -1 YYHHCQDR 8 124 589.7449393060583 1177.4753256789163 2 589.7441894412041 MULTI CID FTMS 0 0 0 8940 110132.21875 1.0 0 0.0 5 Carbamidomethyl (C) _YYHHC(Carbamidomethyl (C))QDR_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000524795.5_1_15:66587446-66615029:+|nuORF;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;ENST00000565281.5_1_15:66585934-66615040:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 7.910154910731844 0.7763180056447161 4 YY 2 -1 42.206 0.0 0.0 3.5845 0.0 0.0 0.0 848.3273131923438 848.3273131923438 27.501225267834 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YY 3.5845 + + 88 + 1 1.827 94624.1 0.6600000262260437 4383 4560 8940 HBL1_DMSO_200M_050219_2,8945 HBL1_DMSO_200M_050219_2,8945,YYHHCQDR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8947 48.631 26.0 1504600.0 25 0 167700.0 + 32509 SALLDEPTA 9 71 458.7346323113712 915.4547116895424 2 458.7348205447197 MULTI CID FTMS 0 0 0 8946 2049348.25 0.9394220441998828 2 -0.1113204956054687 1 Unmodified _SALLDEPTA_ REV__ENSG00000164050|ENST00000296440|PLXNB1 16.942295170755138 0.3780752226737986 4 [TP]AV 4 -1 24.126 0.0 0.0 2.6355 0.0 0.0 0.0 544.2244314983892 544.2244314983892 -0.3106082723666219 0.0 -0.3106082723666219 0.0 0 0.0 1.2218487496163564 0.2215141619232908 0.0 [TP]AV 2.6355 - 87 1 1.827 36361.6 1.0 4384 4561 8946 HBL1_DMSO_200M_050219_2,8947 HBL1_DMSO_200M_050219_2,8947,SALLDEPTA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8948 48.632 24.0 1530600.0 25 0 124740.0 21513 LPIGEDGLMD 10 58 530.2554701289986 1058.496387324797 2 530.2522460818291 MULTI CID FTMS 0 0 0 8946 1139394.625 0.5955267207551109 2 -0.1113204956054687 2 Unmodified _LPIGEDGLMD_ ENSG00000165359|ENST00000639893|INTS6L;ENST00000481908.5_1_X:134654863-134703297:+|nuORF;nc|ENSG00000165359|Q5JSJ4|INTS6L 14.838274106304384 0.5985701837916485 4 {I|L}P{I|L} 3 7 46.198 0.0 0.0 4.3645 0.0 0.0 0.0 732.246504607832 732.246504607832 21.760912590556813 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {I|L}P{I|L} 4.3645 + + 29 + 1 1.827 35972.2 1.0 4385 4561 8946 HBL1_DMSO_200M_050219_2,8948 HBL1_DMSO_200M_050219_2,8948,LPIGEDGLMD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8949 48.634 30.0 1712900.0 25 0 162550.0 + 28842 QAFINQHTV 9 86 529.2741149848266 1056.5336770364531 2 529.2749511599541 MULTI CID FTMS 0 0 0 8946 1155444.125 0.8548808436021412 -2 0.1169967651367187 3 Unmodified _QAFINQHTV_ ENSG00000144161|ENST00000409573|ZC3H8 34.40172386719151 0.1061884637610825 4 [QA]{M(Oxidation (M))|F}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YR] 8 5 + 27.452 0.0 0.0 2.5983 2.5983 75.918 0.0 0.0 0.0 12.83809673312028 7.442190502882156 7.442190502882156 11.374314085677778 0 0.2742275032520141 1.3010299956639813 0.4247425010840047 0.3807196863200844 [QA]{M(Oxidation (M))|F}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YR];[QA]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}QH{[MS]|[{M(Oxidation (M))|F}A]};[HV][Q{I|L}]NQ[YR];[HT]VQN[Q{I|L}]{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}A]Q{[QD]|[EN]|[WG]|[KD]|[RS]}QH{[MS]|[{M(Oxidation (M))|F}A]};[QA]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]H{[MS]|[{M(Oxidation (M))|F}A]};[HV][Q{I|L}]GGQ[YR];[HV][Q{I|L}]N[AG][YR];[HT]V[AG]N[Q{I|L}]{[MS]|[{M(Oxidation (M))|F}A]};[HT]VQGG[Q{I|L}]{[MS]|[{M(Oxidation (M))|F}A]} 2.5983;1.5218;1.0108;0.96236;0.82816;0.65023;0.13412;0.13412;0.090813;0.090813 -;-;-;-;-;-;-;-;-;- 331 + 1 1.827 47688.8 1.0 4386 4561 8946 HBL1_DMSO_200M_050219_2,8949 HBL1_DMSO_200M_050219_2,8949,QAFINQHTV True True QAFINQHTV 48.633677 529.274951159954 10200439.0 8946.0 ENSG00000144161|ENST00000409573|ZC3H8 4.221999804178874 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8950 48.635 66.0 671740.0 25 0 62305.0 + 39199 TYQQVQQTL 9 82 554.7851514273293 1107.5557499214583 2 554.7856323122978 MULTI CID FTMS 0 0 0 8946 1056287.125 0.6664296258488004 2 -0.1113204956054687 4 Unmodified _TYQQVQQTL_ ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42 56.17704186161178 0.0281986971544335 4 VC(Carbamidomethyl (C))QT{I|L} 5 5 39.85 0.0 0.0 3.598 0.0 0.0 488.25901027477727 0.0 488.25901027477727 0.0 10.45281772484288 0.0 0.0 0 0.0 0.0 0.8945990182825423 0.6747425010840047 VC(Carbamidomethyl (C))QT{I|L} 3.598 - 559 + 1 1.827 40631.7 1.0 4387 4561 8946 HBL1_DMSO_200M_050219_2,8950 HBL1_DMSO_200M_050219_2,8950,TYQQVQQTL True True TYQQVQQTL 48.635281 554.785632312298 26831200.0 8946.0 ENSG00000126254|ENST00000262633|RBM42;;nc|ENSG00000126254|Q9BTD8-2|RBM42;;nc|ENSG00000126254|Q9BTD8-3|RBM42;;nc|ENSG00000126254|Q9BTD8-4|RBM42 6.3371475537618 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8951 48.637 57.0 715950.0 25 0 88409.0 11954 GNPQVLTQV 9 66 478.2636365497056 954.5127201662112 2 478.2641174197197 MULTI CID FTMS 0 0 0 8946 872867.625 0.5573443812379519 3 -0.1580963134765625 5 Unmodified _GNPQVLTQV_ ENST00000292524.5_1_8:145748479-145748992:+|nuORF;ENST00000528528.1_1_8:145748473-145749039:+|nuORF 16.942295170755138 0.3780752226737986 4 {I|L}W{M(Oxidation (M))|F}QV 5 7 19.953 0.0 0.0 2.0904 0.0 0.0 263.1482226686573 0.0 263.1482226686573 0.0 4.273947874410025 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}W{M(Oxidation (M))|F}QV 2.0904 - 106 + 1 1.827 38043.4 1.0 4388 4561 8946 HBL1_DMSO_200M_050219_2,8951 HBL1_DMSO_200M_050219_2,8951,GNPQVLTQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8952 48.638 75.0 755460.0 25 0 60820.0 + 26371 NSYVSPRI 8 83 468.2508449790174 934.4871370248349 2 468.2509338259697 MULTI CID FTMS 0 0 0 8946 805491.6875 0.4695850884354297 3 -0.1580963134765625 6 Unmodified _NSYVSPRI_ ENSG00000136536|ENST00000409175|MARCHF7;nc|ENSG00000136536|Q9H992-2|MARCHF7 41.8396318013385 0.2035142800366642 4 [NS]YVS[RP]{I|L} 8 0 + 44.53 0.0 0.0 4.7652 4.7652 76.953 0.0 0.0 0.0 33.271395211603284 0.5902924611682039 0.5902924611682039 6.23732915342201 0 0.9247425010840048 1.3979400086720375 0.0 0.2887254899964357 + + [NS]YVS[RP]{I|L};[NS]{I|L}KKN[MT];[NS]{I|L}KKC(Carbamidomethyl (C))SV;[NS]Y{I|L}[RP]SV;[NS]{I|L}KK[CG]SV;[NS]{I|L}KKGG[MT];[NS]{I|L}KK[CS]GV;[NS]{I|L}Y[RP]SV 4.7652;4.0978;3.7844;3.1885;2.7932;2.7797;2.5031;2.3313 +;-;-;-;-;-;-;- + 173 + 1 1.827 51396.0 1.0 4389 4561 8946 HBL1_DMSO_200M_050219_2,8952 HBL1_DMSO_200M_050219_2,8952,NSYVSPRI False True NSYVSPRI 48.638446 468.25093382597 50914392.0 8946.0 nc|ENSG00000136536|Q9H992-2|MARCHF7;;ENSG00000136536|ENST00000409175|MARCHF7 5.153130531311035 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8953 48.64 91.0 413810.0 25 0 45152.0 + 36450 SYYQSSVQY 9 60 562.7483136223401 1123.48207431148 2 562.7487060427666 MULTI CID FTMS 0 0 0 8946 654860.0 0.5894556911906029 2 -0.1113204956054687 7 Unmodified _SYYQSSVQY_ ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5 30.63653989081413 0.1413794767160703 4 [YQ]SY{[CA]|SS}VQY 9 3 [YQ]SY{[CA]|SS}V + + 19.821 18.517 2.2738 1.7642 1.7642 44.444 0.0 0.0 0.0 0.0 1.1703719327468285 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 [YQ]SY{[CA]|SS}VQY 1.7642 - 204 + 1 1.827 37034.8 1.0 4390 4561 8946 HBL1_DMSO_200M_050219_2,8953 HBL1_DMSO_200M_050219_2,8953,SYYQSSVQY False True SYYQSSVQY 48.640454 562.748706042767 17464184.0 8946.0 nc|ENSG00000164818|Q86Y56-3|DNAAF5;;nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENSG00000164818|ENST00000297440|DNAAF5 8.30763832728068 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8954 48.643 115.0 321610.0 25 0 30938.0 + -1 EIQQLMFC 8 85 542.7438337785752 1083.4731146239503 2 542.7441284060478 MULTI CID FTMS 0 0 0 8946 558436.5625 0.2500031897494659 3 -0.1580963134765625 8 Carbamidomethyl (C),Oxidation (M) _EIQQLM(Oxidation (M))FC(Carbamidomethyl (C))_ REV__ENSG00000149091|ENST00000456247|DGKZ;REV__ENST00000528173.5_1_11:46391373-46400221:+|nuORF;REV__ENST00000531879.5_1_11:46367016-46400221:+|nuORF;REV__nc|ENSG00000149091|Q13574-1|DGKZ;REV__nc|ENSG00000149091|Q13574-3|DGKZ;REV__nc|ENSG00000149091|Q13574-4|DGKZ;REV__nc|ENSG00000149091|Q13574-5|DGKZ;REV__nc|ENSG00000149091|Q13574-6|DGKZ;REV__nc|ENSG00000149091|Q13574-7|DGKZ 7.910154910731844 0.7763180056447161 4 [MT]{[YC]|[HE]}[KS]{I|L} 7 -1 24.097 0.0 0.0 2.2241 0.0 0.0 0.0 254.07849727459407 254.07849727459407 7.107500652149099 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.0 0.0 [MT]{[YC]|[HE]}[KS]{I|L} 2.2241 - 40 1 1.827 36856.5 1.0 4391 4561 8946 HBL1_DMSO_200M_050219_2,8954 HBL1_DMSO_200M_050219_2,8954,EIQQLMFC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8955 48.646 182.0 463320.0 25 0 86078.0 39897 VFPAGGGP 8 118 351.18462219996667 700.3546914667334 2 351.1840698122978 MULTI CID FTMS 0 0 0 8946 266249.46875 0.9017903856040096 -2 0.1169967651367187 9 Unmodified _VFPAGGGP_ ENSG00000095203|ENST00000374566|EPB41L4B;nc|ENSG00000095203|Q9H329-2|EPB41L4B 6.354104778181461 0.7857632046190106 4 [HD]{M(Oxidation (M))|F}A{I|L}V 6 7 + 58.628 0.0 0.0 8.3712 8.3712 93.974 0.0 0.0 0.0 29.699959567782024 46.15360976290287 29.699959567782024 10.668767403800793 0 0.0 1.0457574905606752 1.2764209843288905 0.0 [HD]{M(Oxidation (M))|F}A{I|L}V;[HD]A{M(Oxidation (M))|F}{I|L}V;[HA]D{M(Oxidation (M))|F}{I|L}V;V{M(Oxidation (M))|F}D[{I|L}A]H;V{M(Oxidation (M))|F}DHA{I|L} 8.3712;6.8478;3.9444;3.5128;3.2048 -;-;-;-;- 73 1 1.827 71106.4 1.0 4392 4561 8946 HBL1_DMSO_200M_050219_2,8955 HBL1_DMSO_200M_050219_2,8955,VFPAGGGP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8956 48.657 581.0 314250.0 25 0 39769.0 + 7742 ELEKKLQQL 9 202 376.8925189923233 1127.65572757717 3 376.8920776247978 MULTI CID FTMS 0 0 0 8946 171532.984375 0.3556602770493622 -4 0.2979660034179687 10 Unmodified _ELEKKLQQL_ REV__ENSG00000164304|ENST00000502583|CAGE1;REV__nc|ENSG00000164304|Q8TC20-2|CAGE1;REV__nc|ENSG00000164304|Q8TC20-3|CAGE1;REV__nc|ENSG00000164304|Q8TC20-4|CAGE1;REV__nc|ENSG00000164304|Q8TC20|CAGE1 27.628801355627647 0.1796483985696185 4 Q{I|L}VVS[YR]P 8 -1 28.26 0.0 0.0 2.5061 0.0 0.0 167.11536381727552 0.0 167.11536381727552 0.0 3.786983713549645 0.0 0.0 0 0.0 0.0 1.1549471895720984 1.0114393726401687 Q{I|L}VVS[YR]P 2.5061 - 1922 + 1 1.827 145593.3 1.0 4393 4561 8946 HBL1_DMSO_200M_050219_2,8956 HBL1_DMSO_200M_050219_2,8956,ELEKKLQQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8957 48.663 377.0 182750.0 25 0 12155.0 + 936 AFIDRKDSYY 10 92 639.3113466746042 1276.6081404160084 2 639.3120605349541 MULTI CID FTMS 0 0 0 8946 157428.125 0.6384224172355424 -2 0.1169967651367187 11 Unmodified _AFIDRKDSYY_ ENSG00000168397|ENST00000404914|ATG4B;ENST00000465399.5_1_2:242577129-242594780:+|nuORF;ENST00000475195.5_1_2:242577129-242594181:+|nuORF;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;ENST00000483778.5_1_2:242577129-242598587:+|nuORF;ENST00000493618.5_1_2:242577129-242598937:+|nuORF;ENST00000494465.5_1_2:242592964-242606150:+|nuORF;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;nc|ENSG00000168397|Q9Y4P1-3|ATG4B;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;nc|ENSG00000168397|Q9Y4P1-6|ATG4B 55.23464941255904 0.0494277333541689 4 A{M(Oxidation (M))|F}{I|L}D 4 6 33.66 0.0 0.0 2.6367 0.0 0.0 0.0 827.3697603815061 827.3697603815061 8.34244409179611 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 + A{M(Oxidation (M))|F}{I|L}D 2.6367 + + 415 + 1 1.827 56889.6 1.0 4394 4561 8946 HBL1_DMSO_200M_050219_2,8957 HBL1_DMSO_200M_050219_2,8957,AFIDRKDSYY True True AFIDRKDSYY 48.663337 639.312060534954 1793741.25 8946.0 nc|ENSG00000168397|Q9Y4P1-6|ATG4B;;ENST00000493618.5_1_2:242577129-242598937:+|nuORF;;ENST00000465399.5_1_2:242577129-242594780:+|nuORF;;ENSG00000168397|ENST00000404914|ATG4B;;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;;ENST00000494465.5_1_2:242592964-242606150:+|nuORF;;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;;nc|ENSG00000168397|Q9Y4P1-3|ATG4B;;ENST00000475195.5_1_2:242577129-242594181:+|nuORF;;ENST00000483778.5_1_2:242577129-242598587:+|nuORF 6.367273330688477 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8958 48.67 385.0 451390.0 25 0 26856.0 + 22801 LQVGKRLL 8 191 309.54316651888064 925.607670156842 3 309.5426513552666 MULTI CID FTMS 0 0 0 8946 152577.5625 0.42583463896939 -4 0.2979660034179687 12 Unmodified _LQVGKRLL_ REV__ENSG00000042286|ENST00000307864|AIFM2;REV__nc|ENSG00000042286|Q9BRQ8-2|AIFM2 26.34127834903884 0.4900704351052977 4 {I|L}[NG]{I|L}K[R{I|L}]{I|L} 8 -1 + 35.138 0.0 0.0 3.7962 3.7962 78.367 0.0 0.0 0.0 21.64320017660792 10.445312593723983 10.445312593723983 10.268024924119672 0 0.0 0.0 0.0 1.274227503252014 {I|L}[NG]{I|L}K[R{I|L}]{I|L};{I|L}[NG]{I|L}{I|L}[RK]{I|L} 3.7962;2.6869 -;- 85 + 1 1.827 139919.9 1.0 4395 4561 8946 HBL1_DMSO_200M_050219_2,8958 HBL1_DMSO_200M_050219_2,8958,LQVGKRLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8959 48.684 800.0 163560.0 25 0 14861.0 -1 CCVAQARV 8 145 482.2300727577877 962.4455925823752 2 482.2309448122978 MULTI CID FTMS 0 0 0 8946 103212.0078125 0.8205443771958232 -1 0.0421066284179687 13 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))VAQARV_ nc|ENSG00000279968|A0A096LPI5|CCDC28A-AS1 24.67388899826682 0.525179942228231 4 EQAARV 6 -1 47.995 0.0 0.0 4.9867 0.0 0.0 290.0872806886227 0.0 290.0872806886227 0.0 36.57473567538384 0.0 0.0 0 1.1549471895720984 0.0 0.3807196863200844 0.3252574989159953 EQAARV 4.9867 - 179 + 1 1.827 103305.4 0.5899999737739563 4396 4561 8946 HBL1_DMSO_200M_050219_2,8959 HBL1_DMSO_200M_050219_2,8959,CCVAQARV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 8961 48.689 6.7 6283200.0 25 0 779780.0 + 25401 DAREIVNNV 9 71 515.2696075004571 1028.5246620677142 2 515.2702514529228 MULTI CID FTMS 0 0 0 8960 8022534.5 0.9506660084416646 1 -0.0540390014648437 1 Unmodified _NDVIGRIEN_ nc|ENSG00000077097|Q02880-2|TOP2B;ENSG00000077097|ENST00000264331|TOP2B 19.256988751693697 0.3154191944385105 4 [DV]N[KQ]VNNV 9 7 + 32.668 0.0 0.0 3.1762 3.1762 67.656 0.0 0.0 0.0 3.0372751160733493 2.172940310928489 2.172940310928489 3.0372751160733493 0 0.9049471895720984 0.0 0.0 0.3494850021680094 [DV]N[KQ]VNNV;[DN]V[KQ]VNNV;[DV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VNNV;{[NV]|[RG]}D[KQ]VNNV;[DV]N[KQ]VGGNV;{[NV]|[RG]}EE{I|L}VNNV;[DN]V[KQ]VGGNV;[DV]GG[KQ]VNNV;[DV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VGGNV;{[NV]|[RG]}D[KQ]VGGNV 3.1762;2.8809;2.7589;2.4966;2.2809;2.0793;1.9856;1.9411;1.8636;1.6013 -;-;-;-;-;-;-;-;-;- 110 1 1.827 39724.8 1.0 4397 4562 8960 HBL1_DMSO_200M_050219_2,8961 HBL1_DMSO_200M_050219_2,8961,NDVIGRIEN False False DAREIVNNV 48.688602 515.270251452923 61765084.0 8960.0 nc|ENSG00000077097|Q02880-2|TOP2B;;ENSG00000077097|ENST00000264331|TOP2B 6.287613232930501 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8962 48.69 12.0 4813500.0 25 0 1069500.0 + 45963 YYYNGKAVY 9 78 570.771447722867 1139.528342512534 2 570.7720214724541 MULTI CID FTMS 0 0 0 8960 4414355.5 0.9492631330859084 1 -0.0540390014648437 2 Unmodified _YYYNGKAVY_ ENST00000563760.5_1_18:52921909-52988969:-|nuORF;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-6|TCF4 34.10243960390752 0.1078313939113124 4 YYYN[KQ]VY 8 2 + 47.089 0.0 0.0 4.1323 4.1323 71.134 0.0 0.0 0.0 4.961987796517704 11.158650111567638 4.961987796517704 3.521825181113627 0 0.8494850021680094 2.0 0.0 0.0 YYYN[KQ]VY;YYYNG[KA]VY;YYYGG[KQ]VY;YYN[KQ]YVY;[KG]NYAVYYY;YYYGGG[KA]VY;[KG]NAVYYYY;[KG]NAYVYYY;YYN[KQ]VYY;[KG]NYAYYVY 4.1323;3.8232;3.3195;3.1462;3.1387;3.0152;3.0078;3.0078;2.8781;2.8359 -;+;-;-;-;-;-;-;-;- + 346 + 1 1.827 48018.0 1.0 4398 4562 8960 HBL1_DMSO_200M_050219_2,8962 HBL1_DMSO_200M_050219_2,8962,YYYNGKAVY True True YYYNGKAVY 48.689779 570.772021472454 74541024.0 8960.0 ENST00000563760.5_1_18:52921909-52988969:-|nuORF;;nc|ENSG00000196628|P15884-2|TCF4;;nc|ENSG00000196628|P15884-6|TCF4 3.725125273068746 2.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 8963 48.691 36.0 1415800.0 25 0 245970.0 + 4883 DGFQPSRSI 9 75 503.7510554878125 1005.487558042425 2 503.7506591677666 MULTI CID FTMS 0 0 0 8960 1060021.5 0.801143495777313 3 -0.1649665832519531 3 Unmodified _DGFQPSRSI_ ENSG00000072274|ENST00000360110|TFRC;ENST00000464368.1_1_3:195789435-195792419:-|nuORF 30.63653989081413 0.1413794767160703 4 {I|L}Q[WD] 4 8 23.94 0.0 0.0 2.381 0.0 0.0 445.2286244123063 0.0 445.2286244123063 0.0 9.960762528683702 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 {I|L}Q[WD] 2.381 - 38 1 1.827 43564.0 1.0 4399 4562 8960 HBL1_DMSO_200M_050219_2,8963 HBL1_DMSO_200M_050219_2,8963,DGFQPSRSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8964 48.693 81.0 782390.0 25 0 83969.0 + 31907 RTVEKTWKL 9 96 387.5644010093409 1159.671373628223 3 387.5643493533134 MULTI CID FTMS 0 0 0 8960 582212.875 0.7150435144311599 2 -0.1008148193359375 4 Unmodified _RTVEKTWKL_ ENSG00000114423|ENST00000394030|CBLB;nc|ENSG00000114423|Q13191-2|CBLB;nc|ENSG00000114423|Q13191-3|CBLB 55.46699784157472 0.0285918206075701 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEKTWK{I|L} 9 0 + 70.447 0.0 0.0 6.0747 6.0747 82.27 0.0 0.0 0.0 8.644141363238646 59.9622800905795 8.644141363238646 6.0955079717232366 0 2.0 0.0 0.4247425010840047 0.5387254899964358 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEKTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTRTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEKT{[SA]|[TG]}R{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTRT{[SA]|[TG]}R{I|L};{[WT]|[RM]}VVKTWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTRT{[DA]|[EG]}K{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VT[VG]TWK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VEK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R{I|L};{[WT]|[RM]}VVKT{[SA]|[TG]}R{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VT[VG]T{[SA]|[TG]}R{I|L} 6.0747;5.5491;5.4374;4.9118;4.7614;4.7551;4.7551;4.487;4.1241;4.1215 +;-;-;-;-;-;-;-;-;- + 761 1 1.827 55828.7 1.0 4400 4562 8960 HBL1_DMSO_200M_050219_2,8964 HBL1_DMSO_200M_050219_2,8964,RTVEKTWKL True True RTVEKTWKL 48.692787 387.564349353313 13496774.0 8960.0 nc|ENSG00000114423|Q13191-2|CBLB;;nc|ENSG00000114423|Q13191-3|CBLB;;ENSG00000114423|ENST00000394030|CBLB 8.420617580413818 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8965 48.7 377.0 391000.0 25 0 49714.0 -1 0 139 534.3122376603843 533.3049611937843 1 534.3121215701103 MULTI CID FTMS 0 0 0 8960 293040.75 0.1210481393760175 -4 0.2714653015136719 5 4 V 1 -1 10.379 0.0 0.0 1.9461 0.0 0.0 416.22556773850926 0.0 416.22556773850926 0.0 1.3442265614629 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.9461 - 50 + 1 1.827 116674.0 1.0 4401 4562 8960 HBL1_DMSO_200M_050219_2,8965 HBL1_DMSO_200M_050219_2,8965, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8966 48.707 389.0 157630.0 25 0 11341.0 + -1 RCSDRVWQRSQ 11 85 739.3548992854519 1476.6952456377037 2 739.3565551638603 MULTI CID FTMS 0 0 0 8960 205290.1875 0.5867272165895547 3 -0.1649665832519531 6 Carbamidomethyl (C) _RC(Carbamidomethyl (C))SDRVWQRSQ_ REV__ENSG00000150403|ENST00000434316|TMCO3;REV__nc|ENSG00000150403|Q6UWJ1-2|TMCO3;REV__nc|ENSG00000150403|Q6UWJ1-3|TMCO3 14.40537977576856 0.7354982482299568 4 {[QV]|[N{I|L}]|[RA]|[KV]}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QS 12 -1 + 70.098 0.0 0.0 4.747 4.747 82.217 0.0 0.0 0.0 27.2073539151444 11.989026179983597 11.989026179983597 11.611814434466185 0 2.3494850021680094 2.0 0.4247425010840047 0.9916440611282626 {[QV]|[N{I|L}]|[RA]|[KV]}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NW{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NA[Y{I|L}]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DA[WH];{[QV]|[N{I|L}]|[RA]|[KV]}NA[Y{I|L}]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}W[WH] 4.747;3.9606;3.31;3.2009 -;-;-;- 160 + 1 1.827 48354.9 1.0 4402 4562 8960 HBL1_DMSO_200M_050219_2,8966 HBL1_DMSO_200M_050219_2,8966,RCSDRVWQRSQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8967 48.71 203.0 423860.0 25 0 65743.0 + 44805 YPNGHFVRV 9 113 363.5264103029485 1087.5574015090456 3 363.5259277224541 MULTI CID FTMS 0 0 0 8960 123924.453125 0.0841571565009992 -4 0.2714653015136719 7 Unmodified _YPNGHFVRV_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 37.97399986684836 0.0865783450051559 4 YPNGH{M(Oxidation (M))|F}VRV 9 0 + 71.01 0.0 0.0 6.5293 6.5293 58.735 0.0 0.0 0.0 54.83929004507788 8.41637507904749 8.41637507904749 0.0 0 0.0 0.958607314841775 0.0 0.7302046884880937 + + YPNGH{M(Oxidation (M))|F}VRV;YPNGHV{M(Oxidation (M))|F}RV;YPGGGHV{M(Oxidation (M))|F}RV;YPGGGH{M(Oxidation (M))|F}VRV;YPNV{[HG]|PP}{M(Oxidation (M))|F}RV;YPGGV{[HG]|PP}{M(Oxidation (M))|F}RV;YV[NP]{[HG]|PP}{M(Oxidation (M))|F}RV;{[HG]|PP}{I|L}{I|L}VHGN{[QN]|[E{I|L}]|[KN]};{[HG]|PP}{I|L}{I|L}VHGGG{[QN]|[E{I|L}]|[KN]};[{I|L}P]{[RE]|[WV]}[WE]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 6.5293;6.5293;5.6826;5.6826;4.8052;3.9585;1.9188;1.7395;0.61598;0.031137 +;-;-;-;-;-;-;-;-;- + 221 + 1 1.827 76239.5 1.0 4403 4562 8960 HBL1_DMSO_200M_050219_2,8967 HBL1_DMSO_200M_050219_2,8967,YPNGHFVRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8968 48.724 800.0 66109.0 25 0 7494.5 14229 IDQRIHLFLKC 11 91 693.3907847072106 0 693.3904296755791 PEAK CID FTMS 0 0 0 8960 87089.4453125 0.5736592676333039 -11 1.0071563720703125 8 Unmodified _IDQRIHLFLKC_ ENSG00000124678|ENST00000311875|TCP11;nc|ENSG00000124678|Q8WWU5-2|TCP11;nc|ENSG00000124678|Q8WWU5-3|TCP11;nc|ENSG00000124678|Q8WWU5-4|TCP11;nc|ENSG00000124678|Q8WWU5-5|TCP11;nc|ENSG00000124678|Q8WWU5-6|TCP11;nc|ENSG00000124678|Q8WWU5-7|TCP11 1.1933415558491238 0.4761840153648598 4 {M(Oxidation (M))|F} 1 10 1.42 0.0 0.0 0.10254 0.0 0.0 1028.5971384068057 206.0809725397094 1234.6781109465148 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.10254 + + 1 + 1 1.827 43688.9 0.5699999928474426 4404 4562 8960 HBL1_DMSO_200M_050219_2,8968 HBL1_DMSO_200M_050219_2,8968,IDQRIHLFLKC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8969 48.738 800.0 180400.0 25 0 40270.0 + 45967 YYYNGKAVYA 10 137 606.29047153792 1210.56639014264 2 606.2913085818291 MULTI CID FTMS 0 0 0 8960 81606.171875 0.1378609985614169 -3 0.1742782592773437 9 Unmodified _YYYNGKAVYA_ ENST00000563760.5_1_18:52921909-52988969:-|nuORF;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-6|TCF4 49.93300154707207 0.0805441195901191 4 YYYN 4 6 56.102 0.0 0.0 4.6344 0.0 0.0 0.0 604.3115198852859 604.3115198852859 -3.943773597013077 0.0 -3.943773597013077 0.0 0 0.6549471895720985 2.0 0.0 0.0 + YYYN 4.6344 + + 1085 + 1 1.827 106514.1 0.5899999737739563 4405 4562 8960 HBL1_DMSO_200M_050219_2,8969 HBL1_DMSO_200M_050219_2,8969,YYYNGKAVYA True True YYYNGKAVYA 48.738089 606.2902 8723674.0 8960.0 ENST00000563760.5_1_18:52921909-52988969:-|nuORF;;nc|ENSG00000196628|P15884-2|TCF4;;nc|ENSG00000196628|P15884-6|TCF4 4.271560827891032 2.0 True 10.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 8971 48.748 455.0 441650.0 25 0 16590.0 + 29253 QGYRMPRV 8 219 336.1802057734825 1005.5187879206476 3 336.1801330447197 MULTI CID FTMS 0 0 0 8970 222242.53125 0.6629349841391763 -9 0.7324028015136719 1 Unmodified _QGYRMPRV_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 22.736283301280096 0.5659792798204337 4 QGYRMVRP 8 2 + 38.898 0.0 0.0 3.8685 3.8685 65.838 0.0 0.0 0.0 3.886117837380368 2.7711783825856955 2.7711783825856955 1.249387366082999 0 0.0 0.0 0.0 0.3807196863200844 QGYRMVRP;QGYRVMRP;QVG[YR]MRP;QGYRMVPR;QGYRVMPR;QVG[YR]MPR;QV[YR]GMRP;QV[YR]GMPR;QGYRM[RP]V;QGV[YR]MRP 3.8685;3.7442;3.665;3.5929;3.4686;3.3894;2.9698;2.6943;2.6463;2.2747 -;-;-;-;-;-;-;-;+;- + 858 + 1 1.827 159423.9 1.0 4406 4563 8970 HBL1_DMSO_200M_050219_2,8971 HBL1_DMSO_200M_050219_2,8971,QGYRMPRV False True QGYRMPRV 48.748456 336.18013304472 24122385.0 8970.0 nc|ENSG00000254087|P07948-2|LYN;;ENSG00000254087|ENST00000519728|LYN 2.8534602324167886 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8972 48.751 121.0 470100.0 25 0 44584.0 + 43154 VYQAVRQF 8 89 505.7758189997889 1009.5370850663778 2 505.7749816775322 MULTI CID FTMS 0 0 0 8970 403983.5625 0.8244226000979552 -2 0.1113204956054687 2 Unmodified _VYQAVRQF_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000470302.5_1_2:230656574-230657731:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 44.40701690623563 0.1655546087385432 4 VYQAV 5 3 68.756 0.0 0.0 6.8106 0.0 0.0 0.0 446.21482263736567 446.21482263736567 56.53720958383822 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.3807196863200844 + VYQAV 6.8106 + + 252 + 1 1.827 48596.0 1.0 4407 4563 8970 HBL1_DMSO_200M_050219_2,8972 HBL1_DMSO_200M_050219_2,8972,VYQAVRQF False True VYQAVRQF 48.750958 505.774981677532 3841316.75 8970.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12;;ENST00000470302.5_1_2:230656574-230657731:-|nuORF 6.112242539723714 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8973 48.764 736.0 252930.0 25 0 13818.0 + 18522 KYQEYTNEL 9 166 594.282449579702 1186.5503462262038 2 594.2827026247978 MULTI CID FTMS 0 0 0 8970 323646.4375 0.4870157944241043 -2 0.1113204956054687 3 Unmodified _KYQEYTNEL_ ENSG00000183735|ENST00000331710|TBK1;ENST00000545392.1_1_12:64890804-64891535:+|nuORF 99.79894945604345 0.0109923542231827 4 [YQ]KEYTNE{I|L} 9 2 + 89.085 0.0 0.0 7.5079 7.5079 81.077 0.0 0.0 0.0 2.0772410692475063 3.748162098248997 2.0772410692475063 2.0772410692475063 0 0.1595680409956017 0.0 1.9731975075880328 1.916386562212268 [YQ]KEYTNE{I|L};[AG]YKEYTNE{I|L};[YK]QEYTNE{I|L};{[HG]|PP}PQEYTNE{I|L};[YQ]EKYTNE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YKYTNE{I|L};[AG]YEKYTNE{I|L};[YQ]KEYTGGE{I|L};[AG]EYKYTNE{I|L};[AG]YKEYTGGE{I|L} 7.5079;7.3328;7.2542;7.0925;7.0339;6.889;6.8588;6.7319;6.714;6.5605 -;-;+;-;-;-;-;-;-;- + 8018 1 1.827 138995.8 1.0 4408 4563 8970 HBL1_DMSO_200M_050219_2,8973 HBL1_DMSO_200M_050219_2,8973,KYQEYTNEL True True KYQEYTNEL 48.763722 594.282702624798 4847799.5 8970.0 ENST00000545392.1_1_12:64890804-64891535:+|nuORF;;ENSG00000183735|ENST00000331710|TBK1 7.109969615936279 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8974 48.768 215.0 336630.0 25 0 28571.0 + 29832 QQLKKLEEL 9 111 564.8357996106547 1127.6570462881093 2 564.8372070193291 MULTI CID FTMS 0 0 0 8970 195075.546875 0.8039761185348856 -2 0.1113204956054687 4 Unmodified _QQLKKLEEL_ ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1 22.736283301280096 0.2418982879461534 4 K{I|L}[HT] 4 7 18.188 0.0 0.0 1.6129 0.0 0.0 630.3566151349625 0.0 630.3566151349625 0.0 4.208187539523749 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 K{I|L}[HT] 1.6129 - 386 1 1.827 59625.4 1.0 4409 4563 8970 HBL1_DMSO_200M_050219_2,8974 HBL1_DMSO_200M_050219_2,8974,QQLKKLEEL False True QQLKKLEEL 48.767797 564.8379 1734041.75 8970.0 nc|ENSG00000115415|P42224-2|STAT1;;ENSG00000115415|ENST00000361099|STAT1 4.700177510579427 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8975 48.771 163.0 608110.0 25 0 56769.0 + 24227 MALGSDPRV 9 120 473.2463660004781 944.4781790677562 2 473.2459899783134 MULTI CID FTMS 0 0 0 8970 199183.171875 0.1257204030304206 -6 0.4092864990234375 5 Unmodified _MALGSDPRV_ ENSG00000150977|ENST00000280571|RILPL2 21.53697664764585 0.2571576504437394 4 MAWWVW 6 7 44.882 0.0 0.0 4.7521 0.0 0.0 0.0 82.06691156558827 82.06691156558827 10.327637015477713 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 MAWWVW 4.7521 - 444 + 1 1.827 79066.9 1.0 4410 4563 8970 HBL1_DMSO_200M_050219_2,8975 HBL1_DMSO_200M_050219_2,8975,MALGSDPRV False True MALGSDPRV 48.770984 473.245989978313 24858292.0 8970.0 ENSG00000150977|ENST00000280571|RILPL2 6.618105888366699 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8976 48.785 800.0 181040.0 25 0 16217.0 -1 MDNITRQNQFY 11 102 744.3307048317296 1486.646856730259 2 744.3314086794853 MULTI CID FTMS 0 0 0 8970 132942.9375 0.2807549928160943 -4 0.2283172607421875 6 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 4 {[QG]|[NA]}GAQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y 13 -1 + 88.828 0.0 0.0 5.9751 5.9751 84.26 0.0 0.0 0.0 8.860566476931623 11.448658907276368 8.860566476931623 8.860566476931623 0 1.218765315847925 0.8239087409443188 0.0 2.173877368056628 {[QG]|[NA]}GAQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[AG]E{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE{M(Oxidation (M))|F}QQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE{M(Oxidation (M))|F}[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE{M(Oxidation (M))|F}Q[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}AGQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQEA{[CT]|[{M(Oxidation (M))|F}G]}QNA{M(Oxidation (M))|F}Y 5.9751;5.379;5.3648;5.3648;5.3648;5.3648;5.3313;5.3228;5.2994;4.8783 -;-;-;-;-;-;-;-;-;- 4979 1 1.827 104586.8 0.6399999856948853 4411 4563 8970 HBL1_DMSO_200M_050219_2,8976 HBL1_DMSO_200M_050219_2,8976,MDNITRQNQFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8978 48.789 10.0 5155800.0 25 0 1111700.0 + 12415 GTITTFEHA 9 77 488.7404375874658 975.4663222417316 2 488.7406494021416 MULTI CID FTMS 0 0 0 8977 5635387.5 0.9724874855851802 1 -0.0641517639160156 1 Unmodified _GTITTFEHA_ ENSG00000167658|ENST00000309311|EEF2 71.13359017698441 0.0206607516130725 4 {[SA]|[TG]}{I|L}TT{M(Oxidation (M))|F}E[HA] 9 0 + 77.285 0.0 0.0 7.9229 7.9229 95.936 0.0 0.0 0.0 65.6914468044949 5.509074688805811 5.509074688805811 25.568109453757657 0 1.110924374808178 1.6989700043360187 0.7302046884880937 0.0 + + {[SA]|[TG]}{I|L}TT{M(Oxidation (M))|F}E[HA];{[SA]|[TG]}{I|L}TT[C(Carbamidomethyl (C))Q][VP];{[SA]|[TG]}{I|L}TT{[QC]|[C(Carbamidomethyl (C))A]}G[VP];{[SA]|[TG]}{I|L}T{[QC]|[C(Carbamidomethyl (C))A]}TG[VP];{[SA]|[TG]}{I|L}T{[QC]|[C(Carbamidomethyl (C))A]}[PG]S{I|L};{[SA]|[TG]}[HN]{[HG]|PP}T[RP];{[YC]|[HE]}[HV]TT[RP];[HA][NS]{[HG]|PP}T[RP] 7.9229;5.3018;4.8606;4.1165;3.9531;3.5893;2.4063;0.53102 +;-;-;-;-;-;-;- + 200 + 1 1.827 44061.6 1.0 4412 4564 8977 HBL1_DMSO_200M_050219_2,8978 HBL1_DMSO_200M_050219_2,8978,GTITTFEHA True True GTITTFEHA 48.789416 488.740649402142 81912040.0 8977.0 ENSG00000167658|ENST00000309311|EEF2 8.317450682322184 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8979 48.791 51.0 823670.0 25 0 118760.0 + 16120 ITSSAVTTALK 11 69 546.3188919771992 1090.6232310211983 2 546.3192626833916 MULTI CID FTMS 0 0 0 8977 1053505.0 0.0749443326667457 5 -0.3433761596679687 2 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 30.43146612281011 0.3776625119172622 4 {I|L}TSSAVTT 8 3 80.866 0.0 0.0 7.4147 0.0 0.0 0.0 327.2035311334594 327.2035311334594 66.42912557135531 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + {I|L}TSSAVTT 7.4147 + + 82 + 1 1.827 39702.8 1.0 4413 4564 8977 HBL1_DMSO_200M_050219_2,8979 HBL1_DMSO_200M_050219_2,8979,ITSSAVTTALK False True False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 8980 48.792 47.0 1165000.0 25 0 86290.0 + 29825 QQLGKVVQV 9 98 499.80351785085446 997.592482768509 2 499.8035156130791 MULTI CID FTMS 0 0 0 8977 1236137.5 0.9365470015598856 1 -0.0641517639160156 3 Unmodified _QQLGKVVQV_ ENST00000495104.1_1_4:165841962-165842070:-|nuORF 48.345845343767074 0.0439967357579942 4 {I|L}QQQV 5 6 27.606 0.0 0.0 2.7672 0.0 0.0 383.2537403791032 0.0 383.2537403791032 0.0 9.445129929317329 0.0 0.0 0 0.5242275032520141 0.0 0.0 0.7134679910804405 {I|L}QQQV 2.7672 - 507 1 1.827 46415.9 1.0 4414 4564 8977 HBL1_DMSO_200M_050219_2,8980 HBL1_DMSO_200M_050219_2,8980,QQLGKVVQV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8981 48.795 128.0 512630.0 25 0 64378.0 + -1 IMLTPQAL 8 93 451.7527688641812 901.4909847951624 2 451.7528259158134 MULTI CID FTMS 0 0 0 8977 454788.21875 0.8286119365661818 10 -0.6782760620117188 4 Oxidation (M) _IM(Oxidation (M))LTPQAL_ REV__chr12:132148659-132148844|14|17.21|0.93|4.2|+|0|NOC4L,None|1;REV__ENSG00000184967|ENST00000330579|NOC4L;REV__ENST00000535343.5_1_12:132632219-132636084:+|nuORF 30.22481116460888 0.4082965392918993 4 YP{I|L}T 4 -1 54.329 0.0 0.0 6.0266 0.0 0.0 0.0 424.2119539850219 424.2119539850219 35.42796583575644 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.0 YP{I|L}T 6.0266 - 121 + 1 1.827 56180.3 1.0 4415 4564 8977 HBL1_DMSO_200M_050219_2,8981 HBL1_DMSO_200M_050219_2,8981,IMLTPQAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8982 48.797 131.0 459320.0 25 0 40387.0 + 2971 AVIEAEHTL 9 99 491.7637236022512 981.5128942713023 2 491.7643310427666 MULTI CID FTMS 0 0 0 8977 238964.609375 0.2161583620503576 -3 0.1580963134765625 5 Unmodified _AVIEAEHTL_ ENSG00000135829|ENST00000367549|DHX9;ENST00000436565.2_1_13:77561342-77561690:+|nuORF;ENST00000485081.5_1_1:182847108-182856566:+|nuORF 60.38955033654506 0.025866396858536 4 {[VA]|[{I|L}G]}{I|L}EAE[HT]{I|L} 9 0 + 67.162 0.0 0.0 6.8427 6.8427 91.816 0.0 0.0 0.0 37.58114529289728 6.923487412610356 6.923487412610356 15.21652514092061 0 0.4247425010840047 2.0 1.960409376976188 0.0 + + {[VA]|[{I|L}G]}{I|L}EAE[HT]{I|L};{[VA]|[{I|L}G]}{I|L}EA[VS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[VA]|[{I|L}G]}{I|L}E[VS]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[VA]|[{I|L}G]}{I|L}E[VS][HD]{I|L};{[QN]|[E{I|L}]|[KN]}P[DP]E{I|L}G{I|L};{[QN]|[E{I|L}]|[KN]}[HT]AE{I|L}G{I|L};{[VA]|[{I|L}G]}{[NV]|[RG]}[C(Carbamidomethyl (C))H]{I|L}G{I|L};[{I|L}T]HEAE{I|L}G{I|L};[QP]SAPAE{I|L}G{I|L};{[YC]|[HE]}AT{I|L}E{I|L}G{I|L} 6.8427;5.2924;5.0261;4.54;2.7298;2.6777;2.1996;1.937;1.8097;1.7576 +;-;-;-;-;-;-;-;-;- + 431 + 1 1.827 51299.4 1.0 4416 4564 8977 HBL1_DMSO_200M_050219_2,8982 HBL1_DMSO_200M_050219_2,8982,AVIEAEHTL True True AVIEAEHTL 48.797316 491.764331042767 6905238.0 8977.0 ENST00000485081.5_1_1:182847108-182856566:+|nuORF;;ENST00000436565.2_1_13:77561342-77561690:+|nuORF;;ENSG00000135829|ENST00000367549|DHX9 5.892695267995198 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8983 48.811 800.0 246130.0 25 0 14728.0 + 30363 RAIDSIHQL 9 175 526.7950820074403 1051.5756110816806 2 526.7957031130791 MULTI CID FTMS 0 0 0 8977 214571.5 0.3431277728043717 3 -0.2175865173339843 6 Unmodified _RAIDSIHQL_ ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L 44.391923383255 0.0526658857881241 4 {[DA]|[EG]}R{I|L}S{I|L}HQ{I|L} 9 3 + 82.365 0.0 0.0 7.8325 7.8325 91.507 0.0 0.0 0.0 19.6310689291954 16.478174818886373 16.478174818886373 9.208187539523747 0 0.9308845489566888 1.6989700043360187 0.2887254899964357 0.555462187404089 {[DA]|[EG]}R{I|L}S{I|L}HQ{I|L};{[DA]|[EG]}R{I|L}S{I|L}H[AG]{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}HQ{I|L};[AG]{I|L}[DV]S{I|L}HQ{I|L};[Q{I|L}][DV]S{I|L}HQ{I|L};{I|L}E[PG]{I|L}[WP]Q{I|L};[R{I|L}]ADS{I|L}HQ{I|L};[DV][Q{I|L}]S{I|L}HQ{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}H[AG]{I|L};[AG]{I|L}[DV]S{I|L}H[AG]{I|L} 7.8325;6.9569;5.9657;5.8828;5.8481;5.2873;5.2342;5.1919;5.0901;5.0113 -;-;-;-;-;-;-;-;-;- 1450 1 1.827 154481.0 0.8399999737739563 4417 4564 8977 HBL1_DMSO_200M_050219_2,8983 HBL1_DMSO_200M_050219_2,8983,RAIDSIHQL True True RAIDSIHQL 48.811147 526.795703113079 4183848.5 8977.0 ENSG00000104885|ENST00000398665|DOT1L;;nc|ENSG00000104885|Q8TEK3-1|DOT1L 5.105578263600667 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8984 48.825 800.0 221610.0 25 0 15545.0 + 32149 RVQDEDMETL 10 141 618.2820346412618 1234.5495163493235 2 618.2819091677666 MULTI CID FTMS 0 0 0 8977 188495.765625 0.3165630483691073 -3 0.1580963134765625 7 Unmodified _RVQDEDMETL_ ENSG00000165525|ENST00000298310|NEMF;ENST00000556925.5_1_14:50264161-50281481:-|nuORF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF 49.52724829834842 0.0829255630816734 4 {[VA]|[{I|L}G]}GRDEDMET{I|L} 11 3 + 81.802 0.0 0.0 6.6261 6.6261 82.452 0.0 0.0 0.0 4.473802692363151 16.575773191777927 4.473802692363151 4.473802692363151 0 0.8494850021680094 0.8538719643217619 0.805462187404089 0.7742275032520141 {[VA]|[{I|L}G]}GRDEDMET{I|L};[{I|L}T]E{[{M(Oxidation (M))|F}H]|[RQ]}DMET{I|L};[RV]QDEDMET{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RN]EDMET{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}RDEDMET{I|L};{[VA]|[{I|L}G]}GRDEDMTE{I|L};[DP][KA]SEDMET{I|L};[{I|L}T]E{[{M(Oxidation (M))|F}H]|[RQ]}DMTE{I|L};[RV][AG]DEDMET{I|L};{[TV]|[{I|L}S]}[NP]SEDMET{I|L} 6.6261;6.2637;6.0464;6.0149;5.7882;5.6941;5.6049;5.3317;5.3041;5.2163 -;-;+;-;-;-;-;-;-;- + 2133 1 1.827 130935.4 0.7900000214576721 4418 4564 8977 HBL1_DMSO_200M_050219_2,8984 HBL1_DMSO_200M_050219_2,8984,RVQDEDMETL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8985 48.835 579.0 223850.0 25 0 33076.0 + 39854 VFHAGTAL 8 153 408.2241002006276 814.4336474680551 2 408.2241088747978 MULTI CID FTMS 0 0 0 8977 165102.453125 0.4111923490344805 -3 0.1580963134765625 8 Unmodified _VFHAGTAL_ ENSG00000159131|ENST00000381815|GART;ENST00000424203.5_1_21:34876433-34900844:-|nuORF;nc|ENSG00000159131|P22102-2|GART 56.04830969593885 0.114297258605095 4 {[{M(Oxidation (M))|F}H]|[RQ]}VAGTA{I|L} 8 2 + 57.795 0.0 0.0 7.0964 7.0964 81.073 0.0 0.0 0.0 9.386218330464622 36.368740508026825 9.386218330464622 2.785698947408129 0 0.805462187404089 0.0 1.0 0.2396518287104437 {[{M(Oxidation (M))|F}H]|[RQ]}VAGTA{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}VQTA{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}AVGTA{I|L};[HA]{M(Oxidation (M))|F}VGTA{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}V[NS]V{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}VA[QT]{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}A[QT]V{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}AV[QT]{I|L};[HA][QT]{M(Oxidation (M))|F}V{I|L};[HA]G[TA]{M(Oxidation (M))|F}V{I|L} 7.0964;6.7544;5.9247;4.8912;3.8381;3.6649;2.6665;2.4933;2.1145;1.9461 -;-;-;-;-;-;-;-;-;- 550 1 1.827 101797.6 1.0 4419 4564 8977 HBL1_DMSO_200M_050219_2,8985 HBL1_DMSO_200M_050219_2,8985,VFHAGTAL True True VFHAGTAL 48.835115 408.224108874798 2898480.5 8977.0 nc|ENSG00000159131|P22102-2|GART;;ENST00000424203.5_1_21:34876433-34900844:-|nuORF;;ENSG00000159131|ENST00000381815|GART 5.760340054829915 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8986 48.849 800.0 196360.0 25 0 26419.0 -1 0 68 996.101937738354 4975.47330635877 5 996.7039062380792 MULTI CID FTMS 0 0 0 8977 151528.09375 0.8428789025136967 -2 0.1008148193359375 9 4 R 1 -1 6.9897 0.0 0.0 0.14048 0.0 0.0 3160.0361771034404 1656.3270888530965 4816.363265956536 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.14048 - 13 + 1 1.827 106121.2 0.5899999737739563 4420 4564 8977 HBL1_DMSO_200M_050219_2,8986 HBL1_DMSO_200M_050219_2,8986, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 8988 48.866 800.0 164560.0 25 0 14192.0 + 24396 MFPEHAVKAY 10 143 596.7951457427107 1191.5757385522213 2 596.7949706912041 MULTI CID FTMS 0 0 0 8987 136485.9375 0.7815977052160379 7 -0.4968032836914062 1 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 55.50274090549119 0.048383292844968 4 M{M(Oxidation (M))|F}PEHAVKAY 10 0 + 79.634 0.0 0.0 6.6831 6.6831 91.019 0.0 0.0 0.0 24.830247312148472 16.53212513775344 16.53212513775344 14.503187623076954 0 1.274227503252014 0.0 0.3807196863200844 0.0 + + M{M(Oxidation (M))|F}PEHAVKAY;M{M(Oxidation (M))|F}Y{[CP]|[EA]}AVKAY;M{M(Oxidation (M))|F}Y[RD]VKAY;M{M(Oxidation (M))|F}PEHAVY[KA];M{M(Oxidation (M))|F}PEHA[K{I|L}]GY;M{M(Oxidation (M))|F}Y{[CP]|[EA]}AVY[KA];M{M(Oxidation (M))|F}Y[RD]VY[KA];M{M(Oxidation (M))|F}Y{[CP]|[EA]}A[K{I|L}]GY;M{M(Oxidation (M))|F}Y[RD][K{I|L}]GY;M{M(Oxidation (M))|F}PEHA[HK][VP] 6.6831;5.4659;5.3182;4.8312;4.5129;3.6141;3.4663;3.2958;3.148;3.0942 +;-;-;-;-;-;-;-;-;- + 1197 + 1 1.831 99369.0 0.699999988079071 4421 4565 8987 HBL1_DMSO_200M_050219_2,8988 HBL1_DMSO_200M_050219_2,8988,MFPEHAVKAY True True MFPEHAVKAY 48.866495 596.794970691204 38478012.5 8987.0 ENSG00000122965|ENST00000261741|RBM19 8.074339230855307 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8989 48.868 77.0 831130.0 25 0 66476.0 + 44807 YPNGHFVRV 9 74 544.7856459043807 1087.5567388755612 2 544.7856323122978 MULTI CID FTMS 0 0 0 8987 705495.375 0.9898777149249248 -1 0.0641517639160156 2 Unmodified _YPNGHFVRV_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 46.020951573049366 0.0490941689151868 4 YPNGH{M(Oxidation (M))|F}V[RV] 9 0 + 78.382 0.0 0.0 7.2072 7.2072 89.963 0.0 0.0 0.0 52.18433447093204 4.762036441594191 4.762036441594191 9.208187539523747 0 0.3807196863200844 2.0 0.0 0.7742275032520141 + + YPNGH{M(Oxidation (M))|F}V[RV];YPGGGH{M(Oxidation (M))|F}V[RV];[KP]{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{[QN]|[E{I|L}]|[KN]};[NP]G[KG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QN]|[E{I|L}]|[KN]}V{[QN]|[E{I|L}]|[KN]};[TP][C(Carbamidomethyl (C))K]{[QN]|[E{I|L}]|[KN]}V{[QN]|[E{I|L}]|[KN]} 7.2072;6.3605;0.47381;0.36141;0.35893;0.19701 +;-;-;-;-;- + 143 + 1 1.831 59295.4 1.0 4422 4565 8987 HBL1_DMSO_200M_050219_2,8989 HBL1_DMSO_200M_050219_2,8989,YPNGHFVRV True True YPNGHFVRV 48.86828 544.785632312298 34068439.5 8987.0 ENST00000564909.5_1_15:66585934-66618751:+|nuORF;;nc|ENSG00000166938|Q8TF46-2|DIS3L;;nc|ENSG00000166938|Q8TF46-3|DIS3L;;nc|ENSG00000166938|Q8TF46-4|DIS3L;;ENSG00000166938|ENST00000319212|DIS3L 8.015674908955893 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8990 48.87 70.0 884490.0 25 0 80044.0 + -1 HPTTMSVLC 9 104 502.7291644123043 1003.4437758914088 2 502.7292663455009 MULTI CID FTMS 0 0 0 8987 436965.28125 0.7165672084189398 -7 0.436431884765625 3 Oxidation (M) _HPTTM(Oxidation (M))SVLC_ REV__ENSG00000163625|ENST00000295888|WDFY3;REV__nc|ENSG00000163625|Q8IZQ1-2|WDFY3 28.486842064014134 0.1687311288560894 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM 8 -1 + 42.344 0.0 0.0 4.2199 4.2199 81.473 0.0 0.0 0.0 20.12070344032047 14.235162698957282 14.235162698957282 16.448565749036064 0 0.3494850021680094 2.0 0.8494850021680094 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM;[W{M(Oxidation (M))|F}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TVSM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[SA]|[TG]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[W{M(Oxidation (M))|F}] 4.2199;2.5807;1.1632 -;-;- 161 + 1 1.831 53847.1 1.0 4423 4565 8987 HBL1_DMSO_200M_050219_2,8990 HBL1_DMSO_200M_050219_2,8990,HPTTMSVLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8991 48.873 143.0 818600.0 25 0 83505.0 + 24393 MFPEHAVKAY 10 122 398.1988416358539 1191.5746955077618 3 398.1985961794853 MULTI CID FTMS 0 0 0 8987 407431.8125 0.8040329494070714 7 -0.4968032836914062 4 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 36.506200033944 0.1944608063770638 4 M{M(Oxidation (M))|F}PEHAVKAY 10 0 + 56.391 0.0 0.0 4.7325 4.7325 85.253 0.0 0.0 0.0 15.52288953384349 14.146518864155126 14.146518864155126 38.4595066998737 0 0.3818108876706969 0.0 0.0 0.0 + + M{M(Oxidation (M))|F}PEHAVKAY;[EP]HAV{M(Oxidation (M))|F}{I|L}N{[YC]|[HE]};[EP]HAVK[{M(Oxidation (M))|F}V]{[YC]|[HE]};[EP]{I|L}{[HG]|PP}{M(Oxidation (M))|F}{I|L}N{[YC]|[HE]};{[YC]|[HE]}PAV{M(Oxidation (M))|F}{I|L}N{[YC]|[HE]};{[YD]|[{M(Oxidation (M))|F}M]}[VG]V{M(Oxidation (M))|F}{I|L}N{[YC]|[HE]};{[YC]|[HE]}APV{M(Oxidation (M))|F}{I|L}N{[YC]|[HE]};[HA]EPV{M(Oxidation (M))|F}{I|L}N{[YC]|[HE]};[EP]{I|L}{[HG]|PP}K[{M(Oxidation (M))|F}V]{[YC]|[HE]} 4.7325;1.5049;1.1658;0.41958;0.25855;0.13956;0.09381;0.09381;0.080465 +;-;-;-;-;-;-;-;- + 434 + 1 1.831 96125.2 1.0 4424 4565 8987 HBL1_DMSO_200M_050219_2,8991 HBL1_DMSO_200M_050219_2,8991,MFPEHAVKAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8992 48.875 128.0 526140.0 25 0 49432.0 + 26823 PAPPPPQPL 9 111 457.2606688128342 912.5067846924684 2 457.2612487673759 MULTI CID FTMS 0 0 0 8987 292338.9375 0.3413830756307881 19 -1.5285148620605469 5 Unmodified _PAPPPPQPL_ ENST00000317173.8_1_8:9911977-10102635:+|nuORF;ENST00000441698.6_1_8:9911977-10065409:+|nuORF 56.541270873467816 0.0279970378729908 4 [PA]PPPPG 7 3 56.687 0.0 0.0 6.2122 0.0 0.0 0.0 296.1586150970184 296.1586150970184 43.58812600670348 0.0 0.0 0.0 0 1.1237125054200234 2.0 0.0 0.0 [PA]PPPPG 6.2122 - 519 1 1.831 56628.8 1.0 4425 4565 8987 HBL1_DMSO_200M_050219_2,8992 HBL1_DMSO_200M_050219_2,8992,PAPPPPQPL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8993 48.879 179.0 326530.0 25 0 32801.0 -1 GSTREAPRM 9 85 510.74746665583103 1019.480380378462 2 510.7477905154228 MULTI CID FTMS 0 0 0 8987 216024.8125 0.633381084952834 -1 0.0641517639160156 6 Oxidation (M) _GSTREAPRM(Oxidation (M))_ ENST00000482209.1_1_12:6978793-6979262:+|nuORF 7.910154910731844 0.6385446671287552 4 {I|L}RSG 4 -1 12.735 0.0 0.0 1.2492 0.0 0.0 424.1358093291381 179.0829256647094 603.2187349938475 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}RSG 1.2492 - 128 + 1 1.831 49956.4 1.0 4426 4565 8987 HBL1_DMSO_200M_050219_2,8993 HBL1_DMSO_200M_050219_2,8993,GSTREAPRM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 8994 48.893 800.0 185420.0 25 0 12304.0 + 41877 VPYSKPITTV 10 165 552.818752979252 0 552.8189575076103 PEAK CID FTMS 0 0 0 8987 163438.40625 0.8436495399231945 2 -0.1534347534179687 7 Unmodified _VPYSKPITTV_ ENSG00000062282|ENST00000228027|DGAT2;ENST00000603363.5_1_11:75507249-75511550:+|nuORF;ENST00000603865.1_1_11:75508177-75511550:+|nuORF;nc|ENSG00000062282|Q96PD7-2|DGAT2 73.1962812333195 0.0037715598956955 4 PYSK[{I|L}P]TT 8 2 37.595 0.0 0.0 3.4065 0.0 0.0 99.06700972067604 114.05643640689686 213.1234461275729 0.0 0.0 0.0 0.0 0 1.5431576817365436 0.0 0.8609243748081782 0.2742275032520141 + PYSK[{I|L}P]TT 3.4065 + + 1388 + 1 1.831 124464.3 0.7799999713897705 4427 4565 8987 HBL1_DMSO_200M_050219_2,8994 HBL1_DMSO_200M_050219_2,8994,VPYSKPITTV True True VPYSKPITTV 48.892684 552.81895750761 1679106.25 8987.0 nc|ENSG00000062282|Q96PD7-2|DGAT2;;ENSG00000062282|ENST00000228027|DGAT2;;ENST00000603865.1_1_11:75508177-75511550:+|nuORF;;ENST00000603363.5_1_11:75507249-75511550:+|nuORF 7.160000483194987 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 8995 48.907 800.0 231020.0 25 0 19066.0 + 37273 TIPERGTIGV 10 189 521.7975705887258 0 521.7987548708916 PEAK CID FTMS 0 0 0 8987 146391.953125 0.9286678727642392 -2 0.1109275817871093 8 Unmodified _TIPERGTIGV_ ENST00000412391.6_2_19:36233501-36235273:-|nuORF;ENST00000587987.5_1_19:36233501-36235544:-|nuORF;ENST00000590135.5_1_19:36233501-36233795:-|nuORF;ENST00000591084.5_3_19:36233501-36234996:-|nuORF;ENST00000592913.5_1_19:36233501-36235052:-|nuORF;nc|ENSG00000161265|Q8WU68-2|U2AF1L4 19.361941925380144 0.3034098862319568 4 G{I|L}DPNE 6 9 20.684 0.0 0.0 1.9859 0.0 0.0 331.2078582760918 82.06693445377186 413.2747927298637 0.0 0.0 0.0 0.0 0 0.5 0.0 0.1861818737241735 0.0 G{I|L}DPNE 1.9859 - 715 + 1 1.831 143443.3 0.699999988079071 4428 4565 8987 HBL1_DMSO_200M_050219_2,8995 HBL1_DMSO_200M_050219_2,8995,TIPERGTIGV False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 8996 48.92 800.0 148600.0 25 0 11541.0 + 41981 VQMHKMKQCLQ 11 128 731.8503291118684 1461.6861052905367 2 731.8472778201103 MULTI CID FTMS 0 0 0 8987 136219.6875 0.8933178074578305 -3 0.1649665832519531 9 Carbamidomethyl (C),2 Oxidation (M) _VQM(Oxidation (M))HKM(Oxidation (M))KQC(Carbamidomethyl (C))LQ_ REV__ENSG00000106546|ENST00000242057|AHR 47.74868867922204 0.1300977870992118 4 {[QV]|[N{I|L}]|[RA]|[KV]}NEEQ{M(Oxidation (M))|F}T{I|L}N{I|L}Q 12 -1 + 98.374 0.0 0.0 6.7302 6.7302 82.589 0.0 0.0 0.0 28.55651869704872 74.91357421959897 28.55651869704872 4.282699231911408 0 3.3182503180159344 2.0 0.0 1.392159058960253 {[QV]|[N{I|L}]|[RA]|[KV]}NEEQ{M(Oxidation (M))|F}T{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEE[DG]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEE[DG]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEQ{M(Oxidation (M))|F}T{I|L}GG{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}GGEEQ{M(Oxidation (M))|F}T{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEE[DG]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEE{[SA]|[TG]}P[SG]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEQ{M(Oxidation (M))|F}[DV]N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q 6.7302;6.4372;6.1887;6.173;6.1077;6.1077;5.9903;5.9841;5.9797;5.9267 -;-;-;-;-;-;-;-;-;- 1047 1 1.831 86711.3 0.6600000262260437 4429 4565 8987 HBL1_DMSO_200M_050219_2,8996 HBL1_DMSO_200M_050219_2,8996,VQMHKMKQCLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8997 48.931 612.0 263840.0 25 0 23132.0 + 7408 EGKSLLKV 8 158 437.273997405086 872.533441876972 2 437.2743713259697 MULTI CID FTMS 0 0 0 8987 119081.1484375 0.631554542685241 -1 0.0641517639160156 10 Unmodified _EGKSLLKV_ REV__ENSG00000102001|ENST00000323022|CACNA1F;REV__nc|ENSG00000102001|O60840-4|CACNA1F;REV__nc|ENSG00000102001|O60840-5|CACNA1F;REV__nc|ENSG00000102001|O60840-6|CACNA1F;REV__nc|ENSG00000102001|O60840-7|CACNA1F;REV__nc|ENSG00000102001|O60840|CACNA1F 56.17704186161178 0.1143274477948619 4 DASK{I|L}{I|L}KV 8 -1 + 77.091 0.0 0.0 8.8353 8.8353 88.275 0.0 0.0 0.0 18.7791222632829 4.990155036778248 4.990155036778248 4.990155036778248 0 2.024227503252014 1.6989700043360187 0.0 0.2215141619232908 DASK{I|L}{I|L}KV;DASK{I|L}{I|L}VK;DAV[KT]{I|L}KV;DAV[KT]{I|L}VK;VAD[KT]{I|L}KV;VAD[KT]{I|L}VK;[R{M(Oxidation (M))|F}]K[VP]KV;[R{M(Oxidation (M))|F}]K[VP]VK;[R{M(Oxidation (M))|F}]K[KP]VV 8.8353;8.2634;7.4546;6.8827;3.9736;3.4017;2.548;1.9761;0.22997 -;-;-;-;-;-;-;-;- 399 + 1 1.831 129489.0 1.0 4430 4565 8987 HBL1_DMSO_200M_050219_2,8997 HBL1_DMSO_200M_050219_2,8997,EGKSLLKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 8999 48.936 14.0 5058800.0 25 0 427700.0 + 3568 DAAAKALRI 9 73 464.7824776441763 927.5504023551526 2 464.7826415896416 MULTI CID FTMS 0 0 0 8998 4177677.75 0.7748502112733265 1 -0.0713157653808593 1 Unmodified _DAAAKALRI_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 55.50274090549119 0.0285720310785888 4 DAAAKA{I|L}R{I|L} 9 0 + 88.466 0.0 0.0 9.5376 9.5376 94.718 0.0 0.0 0.0 56.78334379460914 9.76203644159419 9.76203644159419 9.51544993495972 0 2.079689690656103 1.6989700043360187 0.0 0.3054621874040891 + + DAAAKA{I|L}R{I|L};DAAAK{I|L}AR{I|L};DAAA{I|L}KAR{I|L};DAA{I|L}AKAR{I|L};DA{I|L}AAKAR{I|L};{[DA]|[EG]}AAKA{I|L}R{I|L};WAARRR{I|L};D{[NV]|[RG]}KA{I|L}R{I|L};AADAKA{I|L}R{I|L};WARRAR{I|L} 9.5376;8.5117;7.8626;7.0802;6.0267;5.9786;4.5672;4.2324;3.6078;3.4602 +;-;-;-;-;+;-;-;-;- + 189 + 1 1.831 58936.2 1.0 4431 4566 8998 HBL1_DMSO_200M_050219_2,8999 HBL1_DMSO_200M_050219_2,8999,DAAAKALRI True True DAAAKALRI 48.935688 464.782641589642 72708312.0 8998.0 nc|ENSG00000124214|O95793-2|STAU1;;nc|ENSG00000124214|O95793-3|STAU1;;ENSG00000124214|ENST00000371856|STAU1 6.122435728708903 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9000 48.937 78.0 526170.0 25 0 56921.0 + -1 YAFNMKATV 9 89 530.2554701289986 1058.496387324797 2 530.7604247927666 MULTI CID FTMS 0 0 0 8998 424880.96875 0.2518077453018587 8 -0.5320053100585938 2 Carbamidomethyl (C) _SFKC(Carbamidomethyl (C))RTNF_ ENSG00000109971|ENST00000534624|HSPA8 8.593279151180031 0.7721714526254883 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CA]|SS}KAT 7 -1 24.838 0.0 0.0 2.3465 0.0 0.0 0.0 347.15340571762835 347.15340571762835 2.423618477080609 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[CA]|SS}KAT 2.3465 - 255 1 1.831 36828.2 1.0 4432 4566 8998 HBL1_DMSO_200M_050219_2,9000 HBL1_DMSO_200M_050219_2,9000,SFKCRTNF False False YAFNMKATV 48.937485 530.760424792767 36575272.0 8998.0 ENSG00000109971|ENST00000534624|HSPA8 6.989348252614339 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9001 48.939 41.0 1418500.0 25 0 178800.0 + 14141 IAYKFGKTV 9 81 513.8026602214042 1025.5907675096082 2 513.8032104372978 MULTI CID FTMS 0 0 0 8998 1137184.625 0.611564339487332 -1 0.0821189880371093 3 Unmodified _IAYKFGKTV_ ENSG00000133872|ENST00000256255|SARAF 53.40400417844725 0.0329064971918313 4 {I|L}AYK{M(Oxidation (M))|F}GKTV 9 0 + 89.562 0.0 0.0 8.7327 8.7327 96.801 0.0 0.0 0.0 38.4941761583035 11.271211393095244 11.271211393095244 21.760912590556813 0 1.2302046884880935 1.5228787452803376 0.6861818737241735 0.0 + + {I|L}AYK{M(Oxidation (M))|F}GKTV;{I|L}AV[HT]TGKTV 8.7327;6.6109 +;- + 487 + 1 1.831 50688.2 1.0 4433 4566 8998 HBL1_DMSO_200M_050219_2,9001 HBL1_DMSO_200M_050219_2,9001,IAYKFGKTV True True IAYKFGKTV 48.938665 513.803210437298 11187330.0 8998.0 ENSG00000133872|ENST00000256255|SARAF 7.431253433227539 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9002 48.941 81.0 821720.0 25 0 90402.0 -1 PVCKLRKLI 9 90 376.2425095877318 1125.7056993633953 3 376.2426025271416 MULTI CID FTMS 0 0 0 8998 459186.46875 0.4422052615863365 -3 0.1930465698242187 4 Carbamidomethyl (C) _PVC(Carbamidomethyl (C))KLRKLI_ ENSG00000185792|ENST00000332836|NLRP9;nc|ENSG00000185792|Q7RTR0-2|NLRP9 11.494710602746466 0.5255349189887087 4 MPQK{I|L}K[R{I|L}]{I|L} 9 -1 + 38.18 0.0 0.0 3.3916 3.3916 76.488 0.0 0.0 0.0 17.264586085856063 2.24031152317582 2.24031152317582 9.208187539523752 0 0.0 0.0 0.0 0.0 MPQK{I|L}K[R{I|L}]{I|L};MP[AG]K{I|L}K[R{I|L}]{I|L} 3.3916;2.5736 -;- 46 + 1 1.831 58116.2 1.0 4434 4566 8998 HBL1_DMSO_200M_050219_2,9002 HBL1_DMSO_200M_050219_2,9002,PVCKLRKLI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9003 48.943 104.0 560420.0 25 0 40236.0 4048 DALVKEFSVN 10 71 561.2936728990372 1120.5727928648744 2 561.2943603396416 MULTI CID FTMS 0 0 0 8998 338303.5625 0.2736821172806129 -2 0.146270751953125 5 Unmodified _DALVKEFSVN_ ENSG00000197943|ENST00000564138|PLCG2 13.614867670302877 0.6190977555336379 4 DA{I|L}V 4 6 57.167 0.0 0.0 5.1016 0.0 0.0 0.0 719.3359469049436 719.3359469049436 37.95880017344075 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 + DA{I|L}V 5.1016 + + 50 + 1 1.831 49139.1 1.0 4435 4566 8998 HBL1_DMSO_200M_050219_2,9003 HBL1_DMSO_200M_050219_2,9003,DALVKEFSVN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9004 48.946 176.0 457980.0 25 0 61420.0 + 21588 LPKNPEHFV 9 103 360.86632110388456 1079.5771339118537 3 360.8659240603447 MULTI CID FTMS 0 0 0 8998 304403.5625 0.4395327384164661 -4 0.2470855712890625 6 Unmodified _LPKNPEHFV_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 36.12702656103203 0.0967173616627612 4 {I|L}PKNPEH{M(Oxidation (M))|F}V 9 0 + 66.183 0.0 0.0 6.1305 6.1305 88.51 0.0 0.0 0.0 42.44863147817853 10.24337189108141 10.24337189108141 13.015384402724584 0 0.0 1.2218487496163564 0.3494850021680094 0.3807196863200844 + + {I|L}PKNPEH{M(Oxidation (M))|F}V;{I|L}PKGGPEH{M(Oxidation (M))|F}V 6.1305;4.9249 +;- + 421 + 1 1.831 75307.2 1.0 4436 4566 8998 HBL1_DMSO_200M_050219_2,9004 HBL1_DMSO_200M_050219_2,9004,LPKNPEHFV True True LPKNPEHFV 48.946156 360.865924060345 19412420.0 8998.0 ENST00000379752.5_1_1:157029186-157029948:-|nuORF;;nc|ENSG00000122692|Q2TAY7-2|SMU1;;ENSG00000122692|ENST00000397149|SMU1 5.6707766850789385 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9005 48.95 179.0 374510.0 25 0 49713.0 + 21138 IPAVTRSTI 9 79 479.2905426498359 956.5665323664716 2 479.2905761599541 MULTI CID FTMS 0 0 0 8998 268908.6875 0.7109747983407048 -1 0.0821189880371093 7 Unmodified _LPAQGLIFV_ nc|ENSG00000112851|Q96RT1-9|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-7|ERBIN 23.1484247019978 0.2366544122328345 4 {I|L}PAV 4 5 55.222 0.0 0.0 5.7729 0.0 0.0 0.0 573.2996249251742 573.2996249251742 27.289784572998173 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.0 0.0 {I|L}PAV 5.7729 - 66 + 1 1.831 54804.0 1.0 4437 4566 8998 HBL1_DMSO_200M_050219_2,9005 HBL1_DMSO_200M_050219_2,9005,LPAQGLIFV False False IPAVTRSTI 48.949613 479.290576159954 2353367.5 8998.0 nc|ENSG00000112851|Q96RT1-9|ERBIN;;nc|ENSG00000112851|Q96RT1-3|ERBIN;;nc|ENSG00000112851|Q96RT1-5|ERBIN;;nc|ENSG00000112851|Q96RT1-2|ERBIN;;ENSG00000112851|ENST00000284037|ERBIN;;nc|ENSG00000112851|Q96RT1-4|ERBIN;;nc|ENSG00000112851|Q96RT1-8|ERBIN;;nc|ENSG00000112851|Q96RT1-6|ERBIN;;nc|ENSG00000112851|Q96RT1-7|ERBIN 3.553542772928873 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9006 48.963 800.0 208090.0 25 0 16273.0 + 11596 GKRNGGGG 8 136 702.3665019946122 701.3592255280122 1 702.3653442263603 MULTI CID FTMS 0 0 0 8998 245583.375 0.1458379155108692 5 -0.3283233642578125 8 Unmodified _GKRNGGGG_ REV__ENSG00000198055|ENST00000355472|GRK6;REV__nc|ENSG00000198055|P43250-2|GRK6;REV__nc|ENSG00000198055|P43250-3|GRK6 0.6903765706972694 0.8201419426409876 4 {[QN]|[E{I|L}]|[KN]}VNEV 6 -1 + 73.937 0.0 0.0 10.542 10.542 95.038 0.0 0.0 0.0 13.692803136799157 15.52378753635658 13.692803136799157 9.420080530223132 0 1.2134679910804405 1.3979400086720375 1.2856668758921828 0.6549471895720984 {[QN]|[E{I|L}]|[KN]}VNEV;{[QN]|[E{I|L}]|[KN]}VGGEV;{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}EV;{[QN]|[E{I|L}]|[KN]}VND{I|L};{[NV]|[RG]}E{I|L}EV;{[QN]|[E{I|L}]|[KN]}VGGD{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VE{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}D{I|L};{[QN]|[E{I|L}]|[KN]}[DN]{I|L}V;{[NV]|[RG]}EE{I|L}V 10.542;9.1988;8.5896;8.3285;7.7458;6.9854;6.5858;6.3762;6.0792;5.742 -;-;-;-;-;-;-;-;-;- 580 1 1.831 118065.3 0.8199999928474426 4438 4566 8998 HBL1_DMSO_200M_050219_2,9006 HBL1_DMSO_200M_050219_2,9006,GKRNGGGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9007 48.977 800.0 198210.0 25 0 12007.0 + 44883 YPPMFPYGVV 10 157 585.2881833598428 1168.5618137864856 2 585.2894164919853 MULTI CID FTMS 0 0 0 8998 210084.96875 1.0 0 0.0 9 Unmodified _YPPMFPYGVV_ REV__ENSG00000171298|ENST00000302262|GAA 40.44857923139169 0.1528301697436547 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[W{M(Oxidation (M))|F}]VPYV 9 -1 + 80.186 0.0 0.0 6.862 6.862 80.371 0.0 0.0 0.0 25.36139608905181 33.75955625825256 25.36139608905181 2.8626213568858105 0 1.1549471895720984 1.5228787452803376 1.7544321917401078 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[W{M(Oxidation (M))|F}]VPYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PNCYSKVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[W{M(Oxidation (M))|F}]PVYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[W{M(Oxidation (M))|F}]PYVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PNCSYKVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PGGCYSKVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PNCSKYVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PNCSKVYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[EP]{[CT]|[{M(Oxidation (M))|F}G]}VYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[EP]{[CT]|[{M(Oxidation (M))|F}G]}YVV 6.862;6.617;6.26;6.26;6.1672;5.8327;5.5713;5.5713;5.4698;5.4698 -;-;-;-;-;-;-;-;-;- 3193 1 1.831 123193.3 0.8399999737739563 4439 4566 8998 HBL1_DMSO_200M_050219_2,9007 HBL1_DMSO_200M_050219_2,9007,YPPMFPYGVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9008 48.991 800.0 160300.0 25 0 6941.1 + + 16610 KQIEDQMTRL 10 136 631.3323532353896 1260.6501535375792 2 631.3320800662041 MULTI CID FTMS 0 0 0 8998 106348.8203125 0.9623979250751103 1 -0.0713157653808593 10 Unmodified _KEEMRQISQL_ ENSG00000102699|ENST00000381989|PARP4 41.8396318013385 0.1381409678234242 4 KQ{I|L}ED{M(Oxidation (M))|F}[PG]SQ{I|L} 11 -1 + 80.364 0.0 0.0 6.3748 6.3748 83.053 0.0 0.0 0.0 54.30181457779371 8.992279116782754 8.992279116782754 5.841218823962109 0 0.7887254899964358 0.0 1.2302046884880935 1.385151878060192 KQ{I|L}ED{M(Oxidation (M))|F}[PG]SQ{I|L};KQ{I|L}ED{[MG]|[TS]}{I|L}SQ{I|L};K[AG]{I|L}ED{M(Oxidation (M))|F}[PG]SQ{I|L};KQ{I|L}ED{M(Oxidation (M))|F}QS{I|L}[PG];KQ{I|L}EM{[RE]|[WV]}SQ{I|L};KQ{I|L}ED{M(Oxidation (M))|F}QSAPV;K[AG]{I|L}ED{[MG]|[TS]}{I|L}SQ{I|L};KQ{I|L}ED{M(Oxidation (M))|F}ATNPV;KQ{I|L}ED{M(Oxidation (M))|F}[PG][QT]V;KQ{I|L}ED{M(Oxidation (M))|F}AGS{I|L}[PG] 6.3748;5.9115;5.6507;5.6157;5.4977;5.3379;5.1874;5.1385;5.1359;5.1067 -;-;-;-;-;-;-;-;-;- 2896 + 1 1.831 98367.1 0.6100000143051147 4440 4566 8998 HBL1_DMSO_200M_050219_2,9008 HBL1_DMSO_200M_050219_2,9008,KEEMRQISQL False False KQIEDQMTRL 48.991115 631.332080066204 842528.9375 8998.0 ENSG00000102699|ENST00000381989|PARP4 1.120819886525472 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9009 49.002 648.0 226910.0 25 0 28598.0 + 12908 GYHTGYYM 8 153 496.2025179475432 990.3904829618864 2 496.2032958865166 MULTI CID FTMS 0 0 0 8998 104105.140625 0.3217592364545104 4 -0.2824058532714844 11 Unmodified _GYHTGYYM_ ENSG00000172062|ENST00000380707|SMN1;ENSG00000205571|ENST00000380743|SMN2;ENST00000509805.5_1_5:69363243-69366626:+|nuORF;ENST00000518504.5_1_5:70238322-70242051:+|nuORF;nc|ENSG00000205571|Q16637-2|SMN1;nc|ENSG00000205571|Q16637-3|SMN1;nc|ENSG00000205571|Q16637-4|SMN1 20.871210003555333 0.6025813472596342 4 YM 2 6 15.93 0.0 0.0 1.6084 0.0 0.0 678.2766656784864 0.0 678.2766656784864 0.0 3.165652815475364 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + YM 1.6084 + + 340 + 1 1.831 113687.9 1.0 4441 4566 8998 HBL1_DMSO_200M_050219_2,9009 HBL1_DMSO_200M_050219_2,9009,GYHTGYYM False True GYHTGYYM 49.002404 496.203295886517 2307607.0 8998.0 ENSG00000205571|ENST00000380743|SMN2;;nc|ENSG00000205571|Q16637-2|SMN1;;nc|ENSG00000205571|Q16637-4|SMN1;;nc|ENSG00000205571|Q16637-3|SMN1;;ENSG00000172062|ENST00000380707|SMN1;;ENST00000518504.5_1_5:70238322-70242051:+|nuORF;;ENST00000509805.5_1_5:69363243-69366626:+|nuORF 1.1698132654031117 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9011 49.007 41.0 1627600.0 25 0 365640.0 + 44806 YPNGHFVRV 9 88 363.5264103029485 1087.5574015090456 3 363.5260497927666 MULTI CID FTMS 0 0 0 9010 918268.875 0.623596840451028 1 -0.0682830810546875 1 Unmodified _YPNGHFVRV_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 30.63653989081413 0.1413794767160703 4 YPNGH{M(Oxidation (M))|F}V[RV] 9 0 + 61.604 0.0 0.0 5.6644 5.6644 76.293 0.0 0.0 0.0 43.07441916767643 5.642492736872597 5.642492736872597 3.0102999566398125 0 0.0 0.0 0.0 0.6989700043360187 + + YPNGH{M(Oxidation (M))|F}V[RV];YPNGHV{M(Oxidation (M))|F}[RV];YPGGGH{M(Oxidation (M))|F}V[RV];YPGGGHV{M(Oxidation (M))|F}[RV];YPNV{[HG]|PP}{M(Oxidation (M))|F}[RV];YPGGV{[HG]|PP}{M(Oxidation (M))|F}[RV];YV[NP]{[HG]|PP}{M(Oxidation (M))|F}[RV] 5.6644;5.3876;4.8177;4.541;3.6635;2.8169;2.0374 +;-;-;-;-;-;- + 187 + 1 1.837 65620.4 1.0 4442 4567 9010 HBL1_DMSO_200M_050219_2,9011 HBL1_DMSO_200M_050219_2,9011,YPNGHFVRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9012 49.01 139.0 363800.0 25 0 69432.0 + 45964 YYYNGKAVY 9 82 570.771447722867 1139.528342512534 2 570.7718994021416 MULTI CID FTMS 0 0 0 9010 302334.875 0.065014100174677 6 -0.3955802917480469 2 Unmodified _YYYNGKAVY_ ENST00000563760.5_1_18:52921909-52988969:-|nuORF;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-6|TCF4 23.1484247019978 0.2366544122328345 4 YYY 3 6 33.2 0.0 0.0 2.9135 0.0 0.0 0.0 647.3167208307249 647.3167208307249 6.4549706428636 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YYY 2.9135 + + 175 + 1 1.837 46351.2 1.0 4443 4567 9010 HBL1_DMSO_200M_050219_2,9012 HBL1_DMSO_200M_050219_2,9012,YYYNGKAVY False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 9013 49.011 25.0 1997800.0 25 0 185810.0 + 13364 HLGTPGPVSL 10 68 489.2738683983632 976.5331838635263 2 489.2744628787041 MULTI CID FTMS 0 0 0 9010 2230231.0 1.0 0 0.0 3 Unmodified _HLGTPGPVSL_ REV__ENSG00000122515|ENST00000309315|ZMIZ2;REV__nc|ENSG00000122515|Q8NF64-2|ZMIZ2;REV__nc|ENSG00000122515|Q8NF64-3|ZMIZ2 30.63653989081413 0.2803493085145199 4 [VP]H[QT]PVS{I|L} 9 -1 + 42.069 0.0 0.0 4.308 4.308 67.044 0.0 0.0 0.0 1.0720996964786875 1.930665278408341 1.0720996964786875 1.0720996964786875 0 1.1677353201839438 1.6989700043360187 0.4247425010840047 0.0 [VP]H[QT]PVS{I|L};[HT]QPVPVS{I|L};[QT]HPVPVS{I|L};{[SA]|[TG]}AHPVPVS{I|L};[HT][AG]PVPVS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]VPVS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[QT]PVS{I|L};{[TV]|[{I|L}S]}[{I|L}T][MN]VS{I|L};[VP]H[NP][{I|L}T]S{I|L} 4.308;4.1982;4.0989;3.7907;3.2552;2.9333;2.2175;2.2063;1.9033 -;-;-;-;-;-;-;-;- 187 1 1.837 43885.4 1.0 4444 4567 9010 HBL1_DMSO_200M_050219_2,9013 HBL1_DMSO_200M_050219_2,9013,HLGTPGPVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9014 49.012 46.0 1264300.0 25 0 186510.0 + 22024 LPPPPPPAM 9 86 458.751710776598 915.488868619996 2 458.7520629763603 MULTI CID FTMS 0 0 0 9010 902068.125 0.2039550557250405 -13 0.99676513671875 4 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP[PA]M 9 0 + 68.338 0.0 0.0 7.4646 7.4646 94.43 0.0 0.0 0.0 49.99999999999999 13.46787486224656 13.46787486224656 21.197887582883936 0 1.8494850021680087 1.6989700043360187 0.0 0.0 + + [{I|L}P]PPPP[PA]M;[{I|L}P][YK]P[PA]M;[{I|L}P]P[YK][PA]M;[{I|L}P]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[RD]V;[{I|L}P]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[{I|L}P]P[YG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 7.4646;5.1492;4.603;2.6556;2.492;1.6992 +;-;-;-;-;- + 222 + 1 1.837 51330.1 1.0 4445 4567 9010 HBL1_DMSO_200M_050219_2,9014 HBL1_DMSO_200M_050219_2,9014,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9015 49.014 74.0 858620.0 25 0 63314.0 + 219 AATEIVERV 9 105 494.2771459940418 986.5397390548836 2 494.2769958376884 MULTI CID FTMS 0 0 0 9010 515775.09375 0.1726234946800579 -3 0.2175865173339843 5 Unmodified _AATEIVERV_ ENSG00000149823|ENST00000279281|VPS51;nc|ENSG00000149823|Q9UID3-2|VPS51 57.72198328787511 0.0273433238377839 4 AATE{I|L}VERV 9 0 AA + + 52.621 23.724 16.698 5.3339 5.3339 53.906 0.0 0.0 0.0 0.0 24.89732607310904 0.0 0.0 0 1.055462187404089 0.0 0.4247425010840047 0.3252574989159953 + + AATE{I|L}VERV 5.3339 + + 458 + 1 1.837 55966.4 1.0 4446 4567 9010 HBL1_DMSO_200M_050219_2,9015 HBL1_DMSO_200M_050219_2,9015,AATEIVERV True True AATEIVERV 49.014214 494.276995837688 20867228.0 9010.0 nc|ENSG00000149823|Q9UID3-2|VPS51;;ENSG00000149823|ENST00000279281|VPS51 7.302026271820068 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9016 49.017 125.0 573210.0 25 0 83250.0 + 22413 LPTEQPRL 8 80 477.2745714832953 952.5345900333906 2 477.2743713259697 MULTI CID FTMS 0 0 0 9010 459317.59375 0.1738263739534581 -4 0.2643623352050781 6 Unmodified _LPTEQPRL_ ENSG00000102977|ENST00000620761|ACD;ENST00000602423.1_1_16:67693438-67694029:-|nuORF;ENST00000602622.5_1_16:67693438-67693558:-|nuORF;ENST00000602860.5_1_16:67693438-67694150:-|nuORF;ENST00000602945.5_1_16:67692675-67693876:-|nuORF;nc|ENSG00000102977|Q96AP0-2|ACD 19.256988751693697 0.6264283240490721 4 {I|L}PTEQ 5 3 61.454 0.0 0.0 6.4516 0.0 0.0 0.0 381.2264723280397 381.2264723280397 34.47235328539264 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}PTEQ 6.4516 + + 86 + 1 1.837 60798.9 1.0 4447 4567 9010 HBL1_DMSO_200M_050219_2,9016 HBL1_DMSO_200M_050219_2,9016,LPTEQPRL False True LPTEQPRL 49.016781 477.27437132597 22520262.0 9010.0 ENST00000602945.5_1_16:67692675-67693876:-|nuORF;;nc|ENSG00000102977|Q96AP0-2|ACD;;ENST00000602622.5_1_16:67693438-67693558:-|nuORF;;ENSG00000102977|ENST00000620761|ACD;;ENST00000602860.5_1_16:67693438-67694150:-|nuORF;;ENST00000602423.1_1_16:67693438-67694029:-|nuORF 4.069167137145996 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9017 49.018 62.0 927770.0 25 0 83308.0 + 31568 RQLSSSPVP 9 96 485.7687766167918 0 485.7714416384697 PEAK CID FTMS 0 0 0 9010 433209.71875 0.1775206849268056 12 -0.9637832641601562 7 Unmodified _RQLSSSPVP_ REV__ENST00000512805.5_1_5:180670799-180670976:-|nuORF 16.942295170755138 0.2326366549411506 4 SST{I|L}D 5 -1 16.643 0.0 0.0 1.7166 0.0 0.0 397.2413973724524 66.03571497134999 463.2771123438024 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.7614393726401688 0.0 SST{I|L}D 1.7166 - 83 + 1 1.837 50093.7 1.0 4448 4567 9010 HBL1_DMSO_200M_050219_2,9017 HBL1_DMSO_200M_050219_2,9017,RQLSSSPVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9018 49.023 253.0 304680.0 25 0 70186.0 + 45968 YYYNGKAVYA 10 97 606.29047153792 1210.56639014264 2 606.2905151247978 MULTI CID FTMS 0 0 0 9010 320648.5 0.5416860193482823 2 -0.1257896423339843 8 Unmodified _YYYNGKAVYA_ ENST00000563760.5_1_18:52921909-52988969:-|nuORF;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-6|TCF4 24.020572477871973 0.4289996903560794 4 [KG]NYAVYYYA 10 7 + 57.759 0.0 0.0 4.7713 4.7713 74.014 0.0 0.0 0.0 3.177418734074564 17.314102373884452 3.177418734074564 3.807196863200844 0 0.4778183590115361 0.0 0.0 1.836696871556164 [KG]NYAVYYYA;[KG]NAYVYYYA;[KG]NAVYYYYA;[YN]GKAVYYYA;[KG]GGYAVYYYA;[KG]GGAYVYYYA;[KG]GGAVYYYYA;[W{I|L}]YAVYYYA;[W{I|L}]AYVYYYA;[W{I|L}]AVYYYYA 4.7713;4.4568;4.1881;4.1085;4.0142;3.6997;3.431;3.1086;3.1086;3.1086 -;-;-;-;-;-;-;-;-;- 425 1 1.837 58238.6 1.0 4449 4567 9010 HBL1_DMSO_200M_050219_2,9018 HBL1_DMSO_200M_050219_2,9018,YYYNGKAVYA False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 9019 49.027 211.0 456930.0 25 0 72396.0 + 35641 SVATGFSRV 9 111 462.2513226197681 922.4880923063364 2 462.2513000369072 MULTI CID FTMS 0 0 0 9010 275112.96875 0.6358119020902183 -2 0.1534347534179687 9 Unmodified _SVATGFSRV_ ENST00000248923.8_1_22:25006313-25006394:+|nuORF;ENST00000411974.5_3_22:25003943-25006394:+|nuORF;ENST00000432867.5_1_22:25003608-25006394:+|nuORF;ENST00000438643.6_1_22:24999197-25006394:+|nuORF;ENST00000447416.5_3_22:25003608-25006394:+|nuORF 29.84058131909904 0.1515068451768857 4 [VS]ATG{M(Oxidation (M))|F}RSV 9 2 + 73.17 0.0 0.0 7.9318 7.9318 93.781 0.0 0.0 0.0 60.40566692396414 13.644257940123763 13.644257940123763 12.262357117701086 0 1.3494850021680094 2.0 0.8494850021680094 0.0 [VS]ATG{M(Oxidation (M))|F}RSV;[VS]ATG[RH]PV;[VS]ATVQRY;[VS]ATG{[VA]|[{I|L}G]}RY;[VS]A[H{I|L}]GTA[PA];[VS]ATV[HN]PV;[VS]A[HA]VTA[PA];[VS]ATV[AG]RY;[VS][QT]{M(Oxidation (M))|F}RSV;[VS]A[H{I|L}]G[PG]SV 7.9318;6.6025;6.1732;6.0853;5.8443;5.6864;5.2255;5.1692;4.9812;4.8165 -;-;-;-;-;-;-;-;-;- 431 + 1 1.837 78231.8 1.0 4450 4567 9010 HBL1_DMSO_200M_050219_2,9019 HBL1_DMSO_200M_050219_2,9019,SVATGFSRV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9020 49.041 800.0 349480.0 25 0 55768.0 + 38864 TVISEDSVVKA 11 152 574.3135511766133 1146.6125494200264 2 574.3140136599541 MULTI CID FTMS 0 0 0 9010 234603.5625 0.2285957379015734 -3 0.2175865173339843 10 Unmodified _TVISEDSVVKA_ ENSG00000102384|ENST00000682095|CENPI;nc|ENSG00000102384|Q92674-2|CENPI 69.33821966488729 0.0343223916712224 4 {[TV]|[{I|L}S]}{I|L}SEDSVV[KA] 11 0 + 84.448 0.0 0.0 7.365 7.365 93.065 0.0 0.0 0.0 27.36758565225417 14.100192442632974 14.100192442632974 14.100192442632974 0 0.805462187404089 2.0 1.174742501084005 1.1237125054200234 + + {[TV]|[{I|L}S]}{I|L}SEDSVV[KA];{[TV]|[{I|L}S]}{I|L}SEDSV[KG]{I|L};{[TV]|[{I|L}S]}{I|L}SEDSV[KA]V;{[TV]|[{I|L}S]}DDS{I|L}VKAS{I|L};{[TV]|[{I|L}S]}DDSV{I|L}KAS{I|L};{[TV]|[{I|L}S]}EDSVVKAS{I|L};{[TV]|[{I|L}S]}ED[TA]{I|L}KAS{I|L};{[TV]|[{I|L}S]}EA{[ET]|[MV]}VKAS{I|L};{[TV]|[{I|L}S]}EA{[ES]|[DT]|[{I|L}C]}{I|L}KAS{I|L};{[TV]|[{I|L}S]}DDTVVKAS{I|L} 7.365;6.1352;5.9524;4.4332;4.3676;4.3551;3.7888;3.6609;3.5953;3.5411 +;-;-;-;-;-;-;-;-;- + 2524 + 1 1.837 207341.6 0.8999999761581421 4451 4567 9010 HBL1_DMSO_200M_050219_2,9020 HBL1_DMSO_200M_050219_2,9020,TVISEDSVVKA True True TVISEDSVVKA 49.040844 574.314013659954 14363675.0 9010.0 ENSG00000102384|ENST00000682095|CENPI;;nc|ENSG00000102384|Q92674-2|CENPI 7.78099266688029 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9021 49.046 296.0 489410.0 25 0 73927.0 + 32349 RYPDSILEH 9 100 565.2850900641672 1128.5556271951343 2 565.2861816287041 MULTI CID FTMS 0 0 0 9010 213860.59375 0.033451455950009 -5 0.3184013366699219 11 Unmodified _RYPDSILEH_ ENSG00000104738|ENST00000649973|MCM4 70.33199760932243 0.0209706178985989 4 [YR][DP]S{I|L}{I|L}EH 9 0 + 75.34 0.0 0.0 6.6758 6.6758 92.57 0.0 0.0 0.0 12.715299873086607 58.35016244829767 12.715299873086607 27.998037644757048 0 2.110924374808178 0.0 0.3494850021680094 1.1861818737241734 + + [YR][DP]S{I|L}{I|L}EH;[TA]E{[ET]|[MV]}S{I|L}{I|L}EH;[TA]{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PA]{I|L}EH;[YR][DP]S{I|L}[QP][PG];{[YC]|[HE]}[HK][KA]P[WP];[YR][DP][KA]PE[PG] 6.6758;4.1949;3.3982;2.5482;1.398;1.2206 +;-;-;-;-;- + 170 1 1.837 111637.0 1.0 4452 4567 9010 HBL1_DMSO_200M_050219_2,9021 HBL1_DMSO_200M_050219_2,9021,RYPDSILEH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9022 49.05 165.0 509770.0 25 0 42021.0 + 3637 DAEAKFREI 9 116 539.7798419477473 1077.5451309622945 2 540.2916747927666 MULTI CID FTMS 0 0 0 -1 0 12 Unmodified _DAEAKFREI_ ENSG00000128590|ENST00000249356|DNAJB9;ENST00000465725.1_1_7:108212170-108215134:+|nuORF;ENST00000491582.1_1_7:108210452-108212392:+|nuORF 23.78978130925829 0.2284941198415988 4 DAEAKH 6 4 56.252 0.0 0.0 5.2204 0.0 0.0 0.0 423.2267855279906 423.2267855279906 38.90347085966454 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.4247425010840047 0.0 DAEAKH 5.2204 - 635 + 1 1.837 69785.6 1.0 4453 4567 9010 HBL1_DMSO_200M_050219_2,9022 HBL1_DMSO_200M_050219_2,9022,DAEAKFREI False True DAEAKFREI 49.049533 540.291674792767 34497760.0 9010.0 ENST00000465725.1_1_7:108212170-108215134:+|nuORF;;ENST00000491582.1_1_7:108210452-108212392:+|nuORF;;ENSG00000128590|ENST00000249356|DNAJB9 4.176440795262654 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9023 49.057 409.0 218720.0 25 0 14350.0 -1 0 135 496.27715751795085 495.26988105135086 1 497.2828857302666 MULTI CID FTMS 0 0 0 9010 109334.796875 1.0 0 0.0 13 4 [YV][KS] 4 -1 + 21.427 0.0 0.0 4.3263 4.3263 81.726 0.0 0.0 0.0 8.979400086720373 2.976102833988282 2.976102833988282 14.92992819099939 0 0.0 2.0 0.0 0.0 [YV][KS];{[DS]|[MA]|[CV]|TT}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.3263;1.3118 -;- 73 1 1.837 72791.2 1.0 4454 4567 9010 HBL1_DMSO_200M_050219_2,9023 HBL1_DMSO_200M_050219_2,9023, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9024 49.071 800.0 156320.0 25 0 7588.9 -1 VRPRGCHRP 9 151 567.8061415708089 0 567.8058959841728 PEAK CID FTMS 0 0 0 9010 96791.0703125 1.0 0 0.0 14 Carbamidomethyl (C) _VRPRGC(Carbamidomethyl (C))HRP_ ENST00000590244.1_1_17:58543761-58603427:-|nuORF 16.942295170755138 0.2326366549411506 4 {M(Oxidation (M))|F}STNG{I|L}W 7 -1 23.893 0.0 0.0 2.1077 0.0 0.0 243.1694026310168 82.0669420831664 325.2363447141832 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6505149978319906 0.0 {M(Oxidation (M))|F}STNG{I|L}W 2.1077 - 550 + 1 1.837 98209.6 0.6100000143051147 4455 4567 9010 HBL1_DMSO_200M_050219_2,9024 HBL1_DMSO_200M_050219_2,9024,VRPRGCHRP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9026 49.075 23.0 2358200.0 25 0 171410.0 + 2972 AVIEAEHTL 9 99 491.7637236022512 981.5128942713023 2 491.7641174197197 MULTI CID FTMS 0 0 0 9025 710441.125 0.6426382145660074 1 -0.0575065612792968 1 Unmodified _AVIEAEHTL_ ENSG00000135829|ENST00000367549|DHX9;ENST00000436565.2_1_13:77561342-77561690:+|nuORF;ENST00000485081.5_1_1:182847108-182856566:+|nuORF 44.40701690623563 0.0526327925666318 4 {[VA]|[{I|L}G]}{I|L}E[Y{M(Oxidation (M))|F}]Q{I|L} 8 4 + 49.429 0.0 0.0 5.036 5.036 80.433 0.0 0.0 0.0 29.64841568716295 8.984032236941601 8.984032236941601 9.030899869919438 0 0.0 2.0 0.4247425010840047 0.4247425010840047 {[VA]|[{I|L}G]}{I|L}E[Y{M(Oxidation (M))|F}]Q{I|L};{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}[YE]Q{I|L};{[VA]|[{I|L}G]}{I|L}E{[CP]|[EA]}[HT]{I|L};{[VA]|[{I|L}G]}{I|L}E[Y{M(Oxidation (M))|F}][AG]{I|L};{[VA]|[{I|L}G]}{I|L}E[Y{M(Oxidation (M))|F}]AAV;{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}{[CP]|[EA]}HPV;{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}[YE][AG]{I|L};{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}[YE]AAV 5.036;4.1159;4.091;3.6596;3.3224;3.1144;2.7395;2.4023 -;-;+;-;-;-;-;- + 431 + 1 1.837 48133.9 1.0 4456 4568 9025 HBL1_DMSO_200M_050219_2,9026 HBL1_DMSO_200M_050219_2,9026,AVIEAEHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9027 49.076 41.0 1583400.0 25 0 179210.0 + 24228 MALGSDPRV 9 90 473.2463660004781 944.4781790677562 2 473.2458373904228 MULTI CID FTMS 0 0 0 9025 1514767.125 0.9560904752121474 -1 0.0682830810546875 2 Unmodified _MALGSDPRV_ ENSG00000150977|ENST00000280571|RILPL2 21.53697664764585 0.2571576504437394 4 MA{I|L}G 4 5 53.928 0.0 0.0 5.7098 0.0 0.0 0.0 569.2694796197874 569.2694796197874 39.31872208767466 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + MA{I|L}G 5.7098 + + 149 + 1 1.837 55786.6 1.0 4457 4568 9025 HBL1_DMSO_200M_050219_2,9027 HBL1_DMSO_200M_050219_2,9027,MALGSDPRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9028 49.078 24.0 2461400.0 25 0 136380.0 + 16836 KIAPNTPQL 9 96 491.2910534921581 980.5675540511164 2 491.2902099490166 MULTI CID FTMS 0 0 0 9025 1949747.75 0.8033548938419722 -2 0.1395988464355468 3 Unmodified _KIAPNTPQL_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 45.69961567697781 0.0497987121815769 4 [QP]SA[K{I|L}][QP]{I|L} 9 6 + 47.742 0.0 0.0 4.8688 4.8688 70.134 0.0 0.0 0.0 3.819459175083601 18.534627983699963 3.819459175083601 1.6009716789200397 0 0.8807196863200843 1.2218487496163564 0.6861818737241735 0.3252574989159953 [QP]SA[K{I|L}][QP]{I|L};[QP]{I|L}GKT[QP]{I|L};[QP]SRR[QP]{I|L};{[VA]|[{I|L}G]}APGKT[QP]{I|L};{[QN]|[E{I|L}]|[KN]}P[{I|L}A]T[QP]{I|L};{[VA]|[{I|L}G]}[QP]KT[QP]{I|L};[QP]{I|L}T[KG][QP]{I|L};{[VA]|[{I|L}G]}AQ[RV][QP]{I|L};{[VA]|[{I|L}G]}APT[KG][QP]{I|L};[QP]{I|L}T[PA]{I|L}E{I|L} 4.8688;4.7055;4.6947;4.4793;4.3518;4.2008;3.7619;3.6357;3.5357;3.3795 -;-;-;-;-;-;-;-;-;- 759 1 1.837 47250.1 1.0 4458 4568 9025 HBL1_DMSO_200M_050219_2,9028 HBL1_DMSO_200M_050219_2,9028,KIAPNTPQL True True KIAPNTPQL 49.077643 491.290209949017 47074100.0 9025.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 4.687188784281413 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9029 49.079 47.0 1696700.0 25 0 415670.0 + 45899 YYSPHGHIL 9 94 362.850457651857 1085.5295435557712 3 362.8503295779228 MULTI CID FTMS 0 0 0 9025 1116687.5 0.7787931830947263 -1 0.0682830810546875 4 Unmodified _YYSPHGHIL_ ENSG00000144895|ENST00000460851|EIF2A;nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A 28.17323086031832 0.1727213568982648 4 [PS]NDPHGH{I|L}{I|L} 10 4 [PS]ND + + 19.843 6.9551 1.6834 1.828 1.828 44.469 0.0 0.0 0.0 0.0 4.16431791798623 0.0 0.0 0 0.0 0.0 0.0 0.0 [PS]NDPHGH{I|L}{I|L} 1.828 - 485 + 1 1.837 67197.9 1.0 4459 4568 9025 HBL1_DMSO_200M_050219_2,9029 HBL1_DMSO_200M_050219_2,9029,YYSPHGHIL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9030 49.08 48.0 1049400.0 25 0 127420.0 + 43290 WKAQLSSL 8 81 466.7626594021028 931.5107658710056 2 466.7626830935478 MULTI CID FTMS 0 0 0 9025 1057911.625 0.9795297748571524 -1 0.0682830810546875 5 Unmodified _WKAQLSSL_ ENSG00000104133|ENST00000261866|SPG11;nc|ENSG00000104133|Q96JI7-2|SPG11;nc|ENSG00000104133|Q96JI7-3|SPG11 42.09456458481378 0.1992492688217789 4 [{I|L}P]M[TA]{I|L}SS{I|L} 9 4 + 48.923 0.0 0.0 5.252 5.252 77.185 0.0 0.0 0.0 4.682656907234488 26.15910240743119 4.682656907234488 4.71726222832956 0 0.5 1.154901959985743 0.7302046884880937 0.0 [{I|L}P]M[TA]{I|L}SS{I|L};[{I|L}P][YK]PDS{I|L};{[HG]|PP}[YR]{I|L}SS{I|L};{[HG]|PP}{M(Oxidation (M))|F}[TA]{I|L}SS{I|L};[{I|L}P][YK]PSD{I|L};[HV][KT][{M(Oxidation (M))|F}T]S{I|L};[{I|L}P]M[KS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L};{[HG]|PP}[YR]{[WT]|[RM]}{I|L};[HV][KT][{M(Oxidation (M))|F}T]TV;[HV][HV]P[KC]{I|L} 5.252;4.7456;4.0036;3.8637;3.5105;2.3528;1.1195;0.71381;0.69805;0.19675 -;-;-;-;-;-;-;-;-;- 219 1 1.837 44380.0 1.0 4460 4568 9025 HBL1_DMSO_200M_050219_2,9030 HBL1_DMSO_200M_050219_2,9030,WKAQLSSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9031 49.082 60.0 705750.0 25 0 44190.0 + 21131 LPAPPTQNM 9 83 484.7471199658434 967.4796869984868 2 484.7475158572197 MULTI CID FTMS 0 0 0 9025 575473.5625 0.1377616326999617 -8 0.4860725402832031 6 Unmodified _LPAPPTQNM_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 32.116972079565 0.1225432171549407 4 [{I|L}P][PA][TP]QNM 9 0 [{I|L}P][PA][TP]Q + + 17.251 5.0786 0.72099 1.783 1.783 44.448 0.0 0.0 0.0 0.0 7.069486238409652 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + + [{I|L}P][PA][TP]QNM 1.783 + + 80 + 1 1.837 38004.2 1.0 4461 4568 9025 HBL1_DMSO_200M_050219_2,9031 HBL1_DMSO_200M_050219_2,9031,LPAPPTQNM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9032 49.084 128.0 495590.0 25 0 44716.0 -1 MDNITRQNQFY 11 57 744.3307048317296 1486.646856730259 2 744.3315917849541 MULTI CID FTMS 0 0 0 9025 472784.25 0.9984474633134426 1 -0.0575065612792968 7 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 4 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 73.608 0.0 0.0 4.9513 4.9513 74.898 0.0 0.0 0.0 9.8296666070122 11.448658907276377 9.8296666070122 3.979400086720375 0 0.8935078169319297 1.0969100130080565 0.3494850021680094 0.8494850021680094 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQGGA{M(Oxidation (M))|F}Y 4.9513;4.6836;4.4814;4.341;4.341;4.341;4.2901;4.2371;4.2252;4.0733 -;-;-;-;-;-;-;-;-;- 643 1 1.837 51000.0 1.0 4462 4568 9025 HBL1_DMSO_200M_050219_2,9032 HBL1_DMSO_200M_050219_2,9032,MDNITRQNQFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9033 49.087 138.0 800030.0 25 0 77831.0 + 4976 DGRLVINRV 9 110 347.8772069049133 1040.60979131494 3 347.8767272830009 MULTI CID FTMS 0 0 0 9025 430703.125 0.1520170436446695 -3 0.2217178344726562 8 Unmodified _DGRLVINRV_ ENSG00000032389|ENST00000382125|EIPR1;ENST00000496433.5_1_2:3193107-3197993:-|nuORF 29.43715596616401 0.1566398223704148 4 [RD]G{I|L}V{I|L}VNR 9 4 [RD]G{I|L} + + 40.023 13.403 3.0376 3.8461 3.8461 48.179 0.0 0.0 0.0 0.0 27.627429010254897 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.7728787452803376 [RD]G{I|L}V{I|L}VNR 3.8461 - 118 + 1 1.837 96062.3 1.0 4463 4568 9025 HBL1_DMSO_200M_050219_2,9033 HBL1_DMSO_200M_050219_2,9033,DGRLVINRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9034 49.09 116.0 517720.0 25 0 66942.0 + 44927 YPPVINTV 8 82 451.7527688641812 901.4909847951624 2 451.7530395388603 MULTI CID FTMS 0 0 0 9025 426027.6875 0.7762110200225742 14 -1.1255874633789062 9 Unmodified _YPPVINTV_ REV__ENSG00000077616|ENST00000534061|NAALAD2;REV__ENST00000524501.1_1_11:89867955-89891467:+|nuORF;REV__nc|ENSG00000077616|Q9Y3Q0-2|NAALAD2 20.453626601364224 0.6087503291685402 4 YPPR 4 -1 51.414 0.0 0.0 5.7033 0.0 0.0 0.0 385.2107325743297 385.2107325743297 28.711375162600703 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPPR 5.7033 - 115 + 1 1.837 49131.6 1.0 4464 4568 9025 HBL1_DMSO_200M_050219_2,9034 HBL1_DMSO_200M_050219_2,9034,YPPVINTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9035 49.094 269.0 325890.0 25 0 26032.0 + 32150 RVQDEDMETL 10 98 618.2820346412618 1234.5495163493235 2 618.2826415896416 MULTI CID FTMS 0 0 0 9025 371074.1875 0.6231884073183128 1 -0.0575065612792968 10 Unmodified _RVQDEDMETL_ ENSG00000165525|ENST00000298310|NEMF;ENST00000556925.5_1_14:50264161-50281481:-|nuORF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF;nc|ENSG00000165525|O60524-5|NEMF 42.312485326615175 0.1331477410672653 4 [{I|L}T]E{[{M(Oxidation (M))|F}H]|[RQ]}DMET{I|L} 10 5 + 70.314 0.0 0.0 5.6955 5.6955 71.004 0.0 0.0 0.0 5.7390874094431865 15.026975159433531 5.7390874094431865 0.2287874528033739 0 0.9247425010840048 1.3979400086720375 1.174742501084005 0.4247425010840047 [{I|L}T]E{[{M(Oxidation (M))|F}H]|[RQ]}DMET{I|L};[{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}EDMET{I|L};[RV]QDEDMET{I|L};{[QN]|[E{I|L}]|[KN]}T{[{M(Oxidation (M))|F}H]|[RQ]}DMET{I|L};{[QN]|[E{I|L}]|[KN]}QQEDMET{I|L};[{I|L}T]E{[MG]|[TS]}[NP]MET{I|L};[{I|L}T]E{[{M(Oxidation (M))|F}H]|[RQ]}DMTE{I|L};[{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}EDMTE{I|L};[{I|L}T]E{[{M(Oxidation (M))|F}D]|MM}HMET{I|L};{[QN]|[E{I|L}]|[KN]}T{[{M(Oxidation (M))|F}D]|MM}HMET{I|L} 5.6955;5.677;5.2307;5.1372;5.1186;5.0958;5.0467;5.0282;4.9279;4.7136 -;-;+;-;-;-;-;-;-;- + 1659 1 1.837 69678.9 1.0 4465 4568 9025 HBL1_DMSO_200M_050219_2,9035 HBL1_DMSO_200M_050219_2,9035,RVQDEDMETL False True RVQDEDMETL 49.094497 618.282641589642 8398382.0 9025.0 nc|ENSG00000165525|O60524-4|NEMF;;nc|ENSG00000165525|O60524-5|NEMF;;ENSG00000165525|ENST00000298310|NEMF;;ENST00000556925.5_1_14:50264161-50281481:-|nuORF;;nc|ENSG00000165525|O60524-3|NEMF 7.68933629989624 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9036 49.097 106.0 580050.0 25 0 70392.0 + 13459 HLRYCSVHA 9 102 543.2701967864405 1084.5258406396808 2 543.7720825076103 MULTI CID FTMS 0 0 0 9025 346954.34375 0.1899983735751412 -5 0.3326454162597656 11 Unmodified _HLRYCSVHA_ REV__ENSG00000054938|ENST00000376332|CHRDL2;REV__nc|ENSG00000054938|Q6WN34-2|CHRDL2;REV__nc|ENSG00000054938|Q6WN34-4|CHRDL2 7.910154910731844 0.6385446671287552 4 YYS 3 -1 26.276 0.0 0.0 2.4228 0.0 0.0 0.0 668.3435340813402 668.3435340813402 0.5849598184416394 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.0 YYS 2.4228 - 665 1 1.837 54024.8 1.0 4466 4568 9025 HBL1_DMSO_200M_050219_2,9036 HBL1_DMSO_200M_050219_2,9036,HLRYCSVHA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9037 49.1 161.0 618660.0 25 0 22555.0 + 29254 QGYRMPRV 8 119 336.1802057734825 1005.5187879206476 3 336.1798889040947 MULTI CID FTMS 0 0 0 9025 244154.34375 0.7282964925347395 -4 0.2858695983886719 12 Unmodified _QGYRMPRV_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 13.042465956692816 0.7182358012947757 4 WVMR{[QC]|[C(Carbamidomethyl (C))A]}V 7 6 29.455 0.0 0.0 2.9293 0.0 0.0 85.08989150215 0.0 85.08989150215 0.0 11.496294548824366 0.0 0.0 0 0.0994850021680094 0.0 0.0 0.0 WVMR{[QC]|[C(Carbamidomethyl (C))A]}V 2.9293 - 237 1 1.837 83105.2 1.0 4467 4568 9025 HBL1_DMSO_200M_050219_2,9037 HBL1_DMSO_200M_050219_2,9037,QGYRMPRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9038 49.106 330.0 325170.0 25 0 34249.0 + 15733 IRLENEIQ 8 141 507.7833335873077 1013.5521142414154 2 507.7826721072197 MULTI CID FTMS 0 0 0 9025 240589.296875 1.0 0 0.0 13 Unmodified _IRLENEIQ_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 34.40172386719151 0.3279500639400574 4 NE{I|L}Q 4 4 36.414 0.0 0.0 3.5928 0.0 0.0 511.31382949043126 0.0 511.31382949043126 0.0 13.204479878090964 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3054621874040891 + NE{I|L}Q 3.5928 + + 221 1 1.837 85764.9 1.0 4468 4568 9025 HBL1_DMSO_200M_050219_2,9038 HBL1_DMSO_200M_050219_2,9038,IRLENEIQ False True IRLENEIQ 49.105918 507.78267210722 1285457.5 9025.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 2.315554936726888 2.0 True 8.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 9039 49.114 480.0 272490.0 25 0 20789.0 + 4898 DGKKILVV 8 149 436.2839634209396 870.5533739086792 2 436.2841979861259 MULTI CID FTMS 0 0 0 9025 188103.6875 0.8767536513571339 -1 0.0682830810546875 14 Unmodified _DGKKILVV_ ENSG00000120254|ENST00000367321|MTHFD1L;nc|ENSG00000120254|Q6UB35-2|MTHFD1L 45.69961567697781 0.159474709770503 4 [DG]KK{I|L}{I|L}VV 8 0 + 37.093 0.0 0.0 4.2609 4.2609 73.956 0.0 0.0 0.0 5.321945195621076 26.49709463975141 5.321945195621076 5.268024924119672 0 1.1549471895720984 0.638272163982407 0.7614393726401688 0.0 + + [DG]KK{I|L}{I|L}VV;[DG]KK{I|L}V{I|L}V;AA{[SA]|[TG]}K{I|L}{I|L}VV;{[SA]|[TG]}AAK{I|L}{I|L}VV;AA{[SA]|[TG]}K{I|L}V{I|L}V;{[SA]|[TG]}AAK{I|L}V{I|L}V;[SG][VG]K{I|L}{I|L}VV;[KS]{[NV]|[RG]}{I|L}{I|L}VV;[SG][VG]K{I|L}V{I|L}V;[KS]{[NV]|[RG]}{I|L}V{I|L}V 4.2609;3.6557;3.2693;3.2411;2.6641;2.6359;2.4708;2.2859;1.8657;1.6807 +;-;-;-;-;-;-;-;-;- + 288 1 1.837 104851.1 1.0 4469 4568 9025 HBL1_DMSO_200M_050219_2,9039 HBL1_DMSO_200M_050219_2,9039,DGKKILVV False True DGKKILVV 49.114399 436.284197986126 1343933.375 9025.0 nc|ENSG00000120254|Q6UB35-2|MTHFD1L;;ENSG00000120254|ENST00000367321|MTHFD1L 4.131604512532552 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9040 49.128 800.0 348180.0 25 0 14096.0 + 18397 KVVDVEEQQL 10 203 593.8192595919455 1185.623966250691 2 593.8202392458916 MULTI CID FTMS 0 0 0 9025 184228.0 0.4290296193872353 -2 0.1395988464355468 15 Unmodified _KVVDVEEQQL_ ENSG00000012048|ENST00000357654|BRCA1;nc|ENSG00000012048|P38398-3|BRCA1;nc|ENSG00000012048|P38398-4|BRCA1;nc|ENSG00000012048|P38398-5|BRCA1;nc|ENSG00000012048|P38398-6|BRCA1;nc|ENSG00000012048|P38398-7|BRCA1;nc|ENSG00000012048|P38398-8|BRCA1 69.33821966488729 0.0189579340102328 4 {[QN]|[E{I|L}]|[KN]}AKVEEQQ{I|L} 10 3 + 81.367 0.0 0.0 6.8628 6.8628 79.111 0.0 0.0 0.0 2.007924763926084 16.53212513775344 2.007924763926084 2.007924763926084 0 0.5796896906561032 0.0 1.760574239612792 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}AKVEEQQ{I|L};[AG]{I|L}{[TV]|[{I|L}S]}VEEQQ{I|L};[DV]VKVEEQQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VDVEEQQ{I|L};[Q{I|L}]{[TV]|[{I|L}S]}VEEQQ{I|L};{[QN]|[E{I|L}]|[KN]}AKEVEQQ{I|L};{[QN]|[E{I|L}]|[KN]}AKVEEQ[AG]{I|L};{[QN]|[E{I|L}]|[KN]}AKVEE[AG]Q{I|L};[AG]S{I|L}{I|L}VEEQQ{I|L};[AG]{I|L}{[TV]|[{I|L}S]}EVEQQ{I|L} 6.8628;6.6934;6.6126;6.4854;6.1247;6.0936;6.0898;6.0898;5.9806;5.9242 -;-;-;+;-;-;-;-;-;- + 6066 1 1.837 202408.4 0.800000011920929 4470 4568 9025 HBL1_DMSO_200M_050219_2,9040 HBL1_DMSO_200M_050219_2,9040,KVVDVEEQQL True True KVVDVEEQQL 49.12823 593.820239245892 6619842.0 9025.0 nc|ENSG00000012048|P38398-7|BRCA1;;nc|ENSG00000012048|P38398-4|BRCA1;;nc|ENSG00000012048|P38398-3|BRCA1;;nc|ENSG00000012048|P38398-5|BRCA1;;nc|ENSG00000012048|P38398-8|BRCA1;;ENSG00000012048|ENST00000357654|BRCA1;;nc|ENSG00000012048|P38398-6|BRCA1 6.641373157501221 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9042 49.133 68.0 809510.0 25 0 80273.0 + 33276 SFPHTTPSM 9 86 502.7291644123043 1003.4437758914088 2 502.7289916872978 MULTI CID FTMS 0 0 0 9041 545656.5 0.8948069142750669 -3 0.1971054077148437 1 Unmodified _SFPHTTPSM_ ENSG00000197111|ENST00000546463|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 46.020951573049366 0.0490941689151868 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM 8 4 + 55.64 0.0 0.0 5.5449 5.5449 88.198 0.0 0.0 0.0 21.52031512173422 16.40978057358332 16.40978057358332 28.927900303521312 0 0.3494850021680094 2.0 1.2302046884880935 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{I|L}]SM{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS][W{M(Oxidation (M))|F}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[W{M(Oxidation (M))|F}]HV{[RE]|[WV]}M;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q][KT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[W{M(Oxidation (M))|F}]H[W{I|L}]C{I|L};[VG]{[YD]|[{M(Oxidation (M))|F}M]}VH[WE] 5.5449;2.662;2.5775;1.9826;1.7353;1.3826;0.8353;0.37236 -;-;-;-;-;-;-;- 286 + 1 1.837 48598.8 1.0 4471 4569 9041 HBL1_DMSO_200M_050219_2,9042 HBL1_DMSO_200M_050219_2,9042,SFPHTTPSM True True SFPHTTPSM 49.132791 502.728991687298 93831792.0 9041.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;ENST00000547717.1_1_12:53848575-53861193:+|nuORF 7.505943934122722 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9043 49.135 83.0 1029900.0 25 0 65724.0 + 24394 MFPEHAVKAY 10 109 398.1988416358539 1191.5746955077618 3 398.1989318728447 MULTI CID FTMS 0 0 0 9041 378031.09375 0.7460130651319565 11 -0.8768272399902344 2 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 26.268140514670165 0.3785003716575977 4 {[YD]|[{M(Oxidation (M))|F}M]}PEHAVKAY 10 0 + 28.625 0.0 0.0 2.4023 2.4023 68.118 0.0 0.0 0.0 -0.9691001300805624 2.8143450813251967 -0.9691001300805624 4.279032320494807 0 0.2742275032520141 0.0 0.0 0.0 + + {[YD]|[{M(Oxidation (M))|F}M]}PEHAVKAY;{[YD]|[{M(Oxidation (M))|F}M]}PEHA{I|L}[KG]Y;{[YC]|[HE]}[RK]HEP{M(Oxidation (M))|F}{I|L} 2.4023;2.0432;0.62949 +;-;- + 382 + 1 1.837 74009.6 1.0 4472 4569 9041 HBL1_DMSO_200M_050219_2,9043 HBL1_DMSO_200M_050219_2,9043,MFPEHAVKAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9044 49.136 57.0 916650.0 25 0 101590.0 + 16998 KIYEGQVEV 9 85 532.7848608794221 1063.5551688256442 2 532.7849609255791 MULTI CID FTMS 0 0 0 9041 1026014.0 0.0166168125903061 -4 0.2792243957519531 3 Unmodified _KIYEGQVEV_ ENSG00000122406|ENST00000370321|RPL5;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 47.594388314883695 0.0456443387682827 4 {[QG]|[NA]}EY[K{I|L}]VEV 9 6 + 57.866 0.0 0.0 5.4408 5.4408 72.201 0.0 0.0 0.0 1.3283146045791483 16.478174818886373 1.3283146045791483 1.3283146045791483 0 1.1861818737241734 0.0 0.6861818737241735 0.4247425010840047 {[QG]|[NA]}EY[K{I|L}]VEV;[K{I|L}]YEGQVEV;{[QG]|[NA]}EYVK{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}YK{I|L}EV;[YE][K{I|L}]GQVEV;{[QG]|[NA]}EVYK{I|L}EV;[K{I|L}]YEG[AG]VEV;[YE]{[QG]|[NA]}[K{I|L}]VEV;[YE][K{I|L}]G[AG]VEV;[YE]{[QG]|[NA]}VK{I|L}EV 5.4408;5.3159;5.1482;4.7118;4.6305;4.5822;4.4501;4.0478;3.7647;3.7552 -;+;-;-;-;-;-;-;-;- + 295 1 1.837 54032.7 1.0 4473 4569 9041 HBL1_DMSO_200M_050219_2,9044 HBL1_DMSO_200M_050219_2,9044,KIYEGQVEV True True KIYEGQVEV 49.136107 532.784960925579 1391048160.0 9041.0 ENSG00000122406|ENST00000370321|RPL5;;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 3.3888031244277954 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9045 49.14 176.0 783480.0 25 0 112340.0 + 4978 DGRLVINRV 9 120 521.3122034461455 1040.609853959091 2 521.3122436404228 MULTI CID FTMS 0 0 0 9041 340747.40625 0.4104959848714664 -2 0.1257896423339843 4 Unmodified _DGRLVINRV_ ENSG00000032389|ENST00000382125|EIPR1;ENST00000496433.5_1_2:3193107-3197993:-|nuORF 28.23362336080872 0.1719529537093671 4 VDN{I|L}V[WK]T 8 7 42.859 0.0 0.0 4.1187 0.0 0.0 0.0 82.06698023013905 82.06698023013905 25.51304278636961 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.5114393726401688 0.0 VDN{I|L}V[WK]T 4.1187 - 99 + 1 1.837 110744.4 1.0 4474 4569 9041 HBL1_DMSO_200M_050219_2,9045 HBL1_DMSO_200M_050219_2,9045,DGRLVINRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9046 49.145 303.0 282290.0 25 0 17058.0 + 22397 LPSTTRWTAA 10 119 552.294975928391 1102.5753989235818 2 552.2955810427666 MULTI CID FTMS 0 0 0 9041 237643.453125 0.4818496075581404 -3 0.1971054077148437 5 Unmodified _LPSTTRWTAA_ REV__ENST00000469804.1_1_3:160282394-160283312:-|nuORF 14.838274106304384 0.5985701837916485 4 [VP]TSPV[YR]{[QG]|[NA]} 10 -1 + 47.056 0.0 0.0 4.2679 4.2679 76.513 0.0 0.0 0.0 7.781512503836431 9.259687322722812 7.781512503836431 7.781512503836431 0 0.5 0.7958800173440752 1.1421590589602533 0.0 [VP]TSPV[YR]{[QG]|[NA]};{[TV]|[{I|L}S]}PSPV[YR]{[QG]|[NA]};[PS]{I|L}SPV[YR]{[QG]|[NA]};[VP]STPV[YR]{[QG]|[NA]};[VP]SPTV[YR]{[QG]|[NA]};[{I|L}P]SSPV[YR]{[QG]|[NA]};[PS]VTPV[YR]{[QG]|[NA]};[PS]TVPV[YR]{[QG]|[NA]};[PS]VPTV[YR]{[QG]|[NA]};{[MG]|[TS]}PVPV[YR]{[QG]|[NA]} 4.2679;3.5621;3.4742;3.3765;3.1035;2.9282;2.5829;2.5365;2.3098;2.1501 -;-;-;-;-;-;-;-;-;- 419 1 1.837 70504.8 1.0 4475 4569 9041 HBL1_DMSO_200M_050219_2,9046 HBL1_DMSO_200M_050219_2,9046,LPSTTRWTAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9047 49.151 304.0 363940.0 25 0 44469.0 + 28936 QATPWLVWV 9 135 367.2026513150117 1098.5861245452352 3 367.2019225955009 MULTI CID FTMS 0 0 0 9041 209132.90625 1.0 0 0.0 6 Unmodified _QATPWLVWV_ REV__ENST00000432854.5_1_7:44103469-44103637:+|nuORF 8.745405648335112 0.6093864874670651 4 NRCP{I|L}VE 7 -1 48.972 0.0 0.0 4.4577 0.0 0.0 0.0 284.17283044986567 284.17283044986567 32.188878426313245 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NRCP{I|L}VE 4.4577 - 370 + 1 1.837 91835.9 1.0 4476 4569 9041 HBL1_DMSO_200M_050219_2,9047 HBL1_DMSO_200M_050219_2,9047,QATPWLVWV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9048 49.161 577.0 340740.0 25 0 31460.0 + 22369 LPSPSPRI 8 157 433.7581698107976 865.5017866883952 2 433.7582580447197 MULTI CID FTMS 0 0 0 9041 194499.234375 0.5466470789880912 -4 0.2792243957519531 7 Unmodified _LPSPSPRI_ ENSG00000160410|ENST00000291842|SHKBP1 29.081581746732265 0.4323690340403521 4 {I|L}PSPSRP{I|L} 8 2 + 57.208 0.0 0.0 6.6098 6.6098 81.363 0.0 0.0 0.0 44.28965350852792 0.1823721156890911 0.1823721156890911 3.756636139608851 0 0.9929928190999392 1.5228787452803376 0.4247425010840047 0.0 {I|L}PSPSRP{I|L};{I|L}PSPSR{I|L}P 6.6098;6.1758 -;- 190 + 1 1.837 155592.2 1.0 4477 4569 9041 HBL1_DMSO_200M_050219_2,9048 HBL1_DMSO_200M_050219_2,9048,LPSPSPRI False True LPSPSPRI 49.160732 433.75825804472 4315366.0 9041.0 ENSG00000160410|ENST00000291842|SHKBP1 2.347025156021118 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9049 49.164 191.0 355930.0 25 0 48548.0 -1 0 90 408.2493849105288 814.4842168878575 2 408.2494384646416 MULTI CID FTMS 0 0 0 9041 159286.125 0.8379325743839671 1 -0.0853004455566406 8 4 {I|L}Y{I|L} 3 -1 20.802 0.0 0.0 2.554 0.0 0.0 407.24539960445753 0.0 407.24539960445753 0.0 5.598943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y{I|L} 2.554 - 80 + 1 1.837 58232.1 1.0 4478 4569 9041 HBL1_DMSO_200M_050219_2,9049 HBL1_DMSO_200M_050219_2,9049, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9050 49.178 800.0 191640.0 25 0 12370.0 + 24397 MFPEHAVKAY 10 142 596.7951457427107 1191.5757385522213 2 596.7949096560478 MULTI CID FTMS 0 0 0 9041 149658.625 0.8570321602970091 11 -0.8768272399902344 9 Unmodified _MFPEHAVKAY_ ENSG00000122965|ENST00000261741|RBM19 47.74868867922204 0.0933642699623533 4 [EP]HAVKAY{[YD]|[{M(Oxidation (M))|F}M]} 10 4 + 47.772 0.0 0.0 4.0091 4.0091 66.354 0.0 0.0 0.0 1.2512739629169545 4.884381005764311 1.2512739629169545 1.2512739629169545 0 0.0 1.3010299956639813 0.5402877273156862 0.3494850021680094 [EP]HAVKAY{[YD]|[{M(Oxidation (M))|F}M]};{[YD]|[{M(Oxidation (M))|F}M]}[EP]HAVKAY;[EP]HAVK[HD]{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}PAVKAY{[YD]|[{M(Oxidation (M))|F}M]};{[YD]|[{M(Oxidation (M))|F}M]}[VG]VKAY{[YD]|[{M(Oxidation (M))|F}M]};[EP]HAV{M(Oxidation (M))|F}[KS]{[YD]|[{M(Oxidation (M))|F}M]};{[YC]|[HE]}PAVK[HD]{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]{[WT]|[RM]}KAY{[YD]|[{M(Oxidation (M))|F}M]};{[QV]|[N{I|L}]|[RA]|[KV]}YDRAY{[YD]|[{M(Oxidation (M))|F}M]};[HA][EP]VKAY{[YD]|[{M(Oxidation (M))|F}M]} 4.0091;3.9041;3.4395;2.5691;2.4686;2.2873;1.9995;1.7534;1.6107;1.6102 -;+;-;-;-;-;-;-;-;- + 852 1 1.837 115954.2 0.699999988079071 4479 4569 9041 HBL1_DMSO_200M_050219_2,9050 HBL1_DMSO_200M_050219_2,9050,MFPEHAVKAY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9051 49.186 433.0 192970.0 25 0 14775.0 16076 ITPPRRAPSP 10 125 546.3188919771992 1090.6232310211983 2 546.3188354372978 MULTI CID FTMS 0 0 0 9041 127564.578125 0.009074700337913 10 -0.8379936218261719 10 Unmodified _ITPPRRAPSP_ ENSG00000095015|ENST00000399503|MAP3K1 27.628801355627647 0.3479284626772844 4 {I|L}TSSAV 6 7 65.266 0.0 0.0 5.9843 0.0 0.0 0.0 529.2987764947874 529.2987764947874 37.68487429410053 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.0 {I|L}TSSAV 5.9843 - 527 + 1 1.837 68074.0 1.0 4480 4569 9041 HBL1_DMSO_200M_050219_2,9051 HBL1_DMSO_200M_050219_2,9051,ITPPRRAPSP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9052 49.2 800.0 205150.0 25 0 22956.0 -1 YMCHGDLLQ 9 163 548.232986509894 1094.451420086588 2 548.2338134646416 MULTI CID FTMS 0 0 0 9041 113193.625 0.7239082133255257 -1 0.0575065612792968 11 Oxidation (M) _YM(Oxidation (M))CHGDLLQ_ ENSG00000164078|ENST00000296474|MST1R;ENST00000411578.6_1_3:49924742-49933170:-|nuORF;nc|ENSG00000164078|Q04912-2|MST1R;nc|ENSG00000164078|Q04912-7|MST1R 6.723162845929126 0.6799819581413107 4 SAE{I|L}AHNV 8 -1 48.071 0.0 0.0 4.3923 0.0 0.0 255.0354177445941 0.0 255.0354177445941 0.0 18.31878761990978 0.0 0.0 0 0.7059771852360797 0.0 0.7302046884880937 0.8494850021680094 SAE{I|L}AHNV 4.3923 - 3205 + 1 1.837 126699.6 0.6399999856948853 4481 4569 9041 HBL1_DMSO_200M_050219_2,9052 HBL1_DMSO_200M_050219_2,9052,YMCHGDLLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9053 49.214 800.0 74973.0 25 0 3827.7 + -1 IQCVCRKPCIQ 11 94 731.3582082380589 0 731.3570434451103 PEAK CID FTMS 0 0 0 9041 98488.9375 1.0 0 0.0 12 3 Carbamidomethyl (C) _IQC(Carbamidomethyl (C))VC(Carbamidomethyl (C))RKPC(Carbamidomethyl (C))IQ_ REV__ENSG00000165379|ENST00000298119|LRFN5 16.149105407346934 0.3934762919021404 4 NE 2 -1 20.217 0.0 0.0 1.384 0.0 0.0 227.12663276744823 987.463936144504 1214.5905689119525 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 NE 1.384 - 24 + 1 1.837 46353.6 0.5799999833106995 4482 4569 9041 HBL1_DMSO_200M_050219_2,9053 HBL1_DMSO_200M_050219_2,9053,IQCVCRKPCIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9055 49.219 90.0 575240.0 25 0 42935.0 + -1 DALGRPMFAK 10 73 561.2936728990372 1120.5727928648744 2 561.2941161990166 MULTI CID FTMS 0 0 0 9054 437616.5625 0.35402473002945 2 -0.1322784423828125 1 Oxidation (M) _DALGRPM(Oxidation (M))FAK_ REV__ENSG00000185753|ENST00000327877|CXorf38 13.042465956692816 0.6287021003332052 4 DA{I|L} 3 -1 50.177 0.0 0.0 4.4778 0.0 0.0 0.0 818.4021979712461 818.4021979712461 26.989700043360187 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 DA{I|L} 4.4778 + + 46 + 1 1.842 45326.2 1.0 4483 4570 9054 HBL1_DMSO_200M_050219_2,9055 HBL1_DMSO_200M_050219_2,9055,DALGRPMFAK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9056 49.221 82.0 941370.0 25 0 113700.0 + 24829 MPKLGKARLI 10 86 376.2425095877318 1125.7056993633953 3 376.2423583865166 MULTI CID FTMS 0 0 0 9054 660680.125 0.6362474667335644 1 -0.0459175109863281 2 Unmodified _MPKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 10.073929032068715 0.6785112666868882 4 MPQK{I|L}K 6 -1 44.954 0.0 0.0 3.9934 0.0 0.0 0.0 397.25751672916255 397.25751672916255 24.5229849167125 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8807196863200843 MPQK{I|L}K 3.9934 - 51 + 1 1.842 68389.3 1.0 4484 4570 9054 HBL1_DMSO_200M_050219_2,9056 HBL1_DMSO_200M_050219_2,9056,MPKLGKARLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9057 49.222 76.0 830800.0 25 0 54935.0 + 33558 SILRHVAEV 9 65 512.301116793726 1022.587680654252 2 512.3013183474541 MULTI CID FTMS 0 0 0 9054 794961.375 0.652547593654877 -2 0.1428070068359375 3 Unmodified _SILRHVAEV_ ENSG00000134001|ENST00000256383|EIF2S1 43.9818466556824 0.0535980856389242 4 {[TV]|[{I|L}S]}{I|L}RHVAEV 9 0 + 71.735 0.0 0.0 7.0151 7.0151 94.532 0.0 0.0 0.0 20.737862141609185 62.52726745349533 20.737862141609185 44.3801425664015 0 1.298455006504028 2.0 0.2887254899964357 0.0 + + {[TV]|[{I|L}S]}{I|L}RHVAEV;{NN|[MP]|[D{I|L}]|[EV]}WPVV[VP]V 7.0151;2.6751 +;- + 60 1 1.842 55136.8 1.0 4485 4570 9054 HBL1_DMSO_200M_050219_2,9057 HBL1_DMSO_200M_050219_2,9057,SILRHVAEV True True SILRHVAEV 49.222307 512.301318347454 8108910.5 9054.0 ENSG00000134001|ENST00000256383|EIF2S1 5.32723331451416 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9058 49.224 83.0 805410.0 25 0 185400.0 + 17406 KMPEINAKV 9 89 515.2906429723337 1028.5667330114672 2 515.2913696169853 MULTI CID FTMS 0 0 0 9054 667304.25 0.6644134286975761 -3 0.211090087890625 4 Unmodified _KMPEINAKV_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;ENST00000569569.5_1_16:56966069-56970730:+|nuORF;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1 17.86316937532769 0.3531482428618743 4 K[{M(Oxidation (M))|F}T]KAN{I|L} 7 6 39.469 0.0 0.0 3.8372 0.0 0.0 0.0 223.07273279361564 223.07273279361564 20.51152522447381 0.0 0.0 0.0 0 0.5 0.0 0.0 0.2742275032520141 K[{M(Oxidation (M))|F}T]KAN{I|L} 3.8372 - 355 + 1 1.842 54663.7 1.0 4486 4570 9054 HBL1_DMSO_200M_050219_2,9058 HBL1_DMSO_200M_050219_2,9058,KMPEINAKV False True KMPEINAKV 49.224178 515.291369616985 35195168.0 9054.0 nc|ENSG00000051108|Q15011-2|HERPUD1;;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;;nc|ENSG00000051108|Q15011-3|HERPUD1;;ENSG00000051108|ENST00000439977|HERPUD1;;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;;ENST00000569569.5_1_16:56966069-56970730:+|nuORF 3.804904143015544 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9059 49.226 97.0 1060900.0 25 0 97195.0 39850 VFFPKRREL 9 99 397.90492839915737 1190.692955797672 3 397.9047424197197 MULTI CID FTMS 0 0 0 9054 409744.875 0.8281409764694997 -1 0.0853004455566406 5 Unmodified _VFFPKRREL_ ENSG00000126391|ENST00000317568|FRMD8;nc|ENSG00000126391|Q9BZ67-2|FRMD8;nc|ENSG00000126391|Q9BZ67-3|FRMD8 13.614867670302877 0.4681447649821485 4 V{M(Oxidation (M))|F}{I|L}V[KA]V[PS]M 10 7 39.952 0.0 0.0 3.3554 0.0 0.0 0.0 116.05097376041248 116.05097376041248 16.921721654072776 0.0 0.0 0.0 0 0.25 0.0 0.0 0.3807196863200844 V{M(Oxidation (M))|F}{I|L}V[KA]V[PS]M 3.3554 - 260 + 1 1.842 86888.5 1.0 4487 4570 9054 HBL1_DMSO_200M_050219_2,9059 HBL1_DMSO_200M_050219_2,9059,VFFPKRREL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9060 49.232 313.0 225290.0 25 0 11067.0 -1 LDCRNVDRNVL 11 103 687.3485937895254 1372.6826346458506 2 687.3492919802666 MULTI CID FTMS 0 0 0 9054 302745.90625 0.4887261539728152 -2 0.1428070068359375 6 Carbamidomethyl (C) _LDC(Carbamidomethyl (C))RNVDRNVL_ ENST00000289968.10_1_16:24930781-24931099:-|nuORF;ENST00000537417.1_16:24930737-24931099:-|nuORF 20.41453444215458 0.6105011870913812 4 {[SA]|[TG]}N[KS]APSQSANV{I|L} 14 -1 + 82.751 0.0 0.0 6.0284 6.0284 81.028 0.0 0.0 0.0 5.180798623985695 7.698918353923688 5.180798623985695 5.180798623985695 0 0.8494850021680094 0.8538719643217619 2.221848749616356 0.9247425010840048 {[SA]|[TG]}N[KS]APSQSANV{I|L};{[QG]|[NA]}S[KS]APSQSANV{I|L};{[SA]|[TG]}GG[KS]APSQSANV{I|L};{[SA]|[TG]}N[KS]APS[AG]SANV{I|L};{[SA]|[TG]}N[KS]APSQSAGGV{I|L};{[SA]|[TG]}[KG][SG]APSQSANV{I|L};[KG]{[SA]|[TG]}[SG]APSQSANV{I|L};{[SA]|[TG]}NV{[{M(Oxidation (M))|F}H]|[RQ]}SQSANV{I|L};{[TV]|[{I|L}S]}[NG]{[{M(Oxidation (M))|F}H]|[RQ]}SQSANV{I|L};{[NV]|[RG]}AHHPSQSANV{I|L} 6.0284;5.651;5.3691;5.3691;5.3691;5.1498;5.12;5.0976;5.0882;5.0264 -;-;-;-;-;-;-;-;-;- 2852 1 1.842 60069.6 1.0 4488 4570 9054 HBL1_DMSO_200M_050219_2,9060 HBL1_DMSO_200M_050219_2,9060,LDCRNVDRNVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9061 49.246 800.0 180050.0 25 0 12090.0 + 29490 QLKKSQSEGM 10 163 568.2916417130684 1134.5687304929368 2 568.2919189333916 MULTI CID FTMS 0 0 0 9054 204635.09375 1.0 0 0.0 7 Unmodified _QLKKSQSEGM_ REV__ENSG00000178764|ENST00000314393|ZHX2 24.020572477871973 0.4289996903560794 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG{I|L}RP 10 -1 + 63.281 0.0 0.0 5.5775 5.5775 73.082 0.0 0.0 0.0 3.802112417116064 1.5490195998574308 1.5490195998574308 1.5490195998574308 0 0.0 0.0 1.1861818737241734 0.3494850021680094 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG{I|L}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG{I|L}PR;[YV]ESTNG{I|L}RP;[YV]ESTNG{I|L}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STGGG{I|L}PR;[YV]ESTGGG{I|L}RP;[YV]ESTGGG{I|L}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG[RP]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNVVQP 5.5775;5.441;5.1295;4.9929;4.7698;4.6332;4.3217;4.1852;3.4999;3.3209 -;-;-;-;-;-;-;-;-;- 1652 + 1 1.842 107091.1 0.8199999928474426 4489 4570 9054 HBL1_DMSO_200M_050219_2,9061 HBL1_DMSO_200M_050219_2,9061,QLKKSQSEGM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9062 49.26 800.0 197100.0 25 0 11276.0 -1 KLEQCMVCTV 10 141 613.7820535490458 1225.5495541648916 2 613.7822143435478 MULTI CID FTMS 0 0 0 9054 138078.9375 0.1810523305151591 -2 0.1428070068359375 8 Carbamidomethyl (C),Oxidation (M) _KLEQC(Carbamidomethyl (C))M(Oxidation (M))VCTV_ ENSG00000005810|ENST00000544440|MYCBP2;nc|ENSG00000005810|O75592-2|MYCBP2 21.53697664764585 0.484802182336468 4 [VG]KDMVGV 8 -1 51.28 0.0 0.0 4.1842 0.0 0.0 0.0 437.115795062508 437.115795062508 14.203654497896387 0.0 0.0 0.0 0 0.5 2.0 1.1307196863200843 0.2302046884880938 [VG]KDMVGV 4.1842 - 6560 1 1.842 120421.9 0.6600000262260437 4490 4570 9054 HBL1_DMSO_200M_050219_2,9062 HBL1_DMSO_200M_050219_2,9062,KLEQCMVCTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9064 49.272 571.0 185480.0 25 0 11073.0 + 38721 TTVTELQKV 9 151 509.7930415710416 1017.5715302088832 2 509.7934753298759 MULTI CID FTMS 0 0 0 9063 36970.7734375 0.3918811018974222 1 -0.0863609313964843 1 Unmodified _TTVTELQKV_ ENSG00000102189|ENST00000322349|EEA1 42.312485326615175 0.0627620958981271 4 {[DS]|[MA]|[CV]|TT}VTE{I|L}QKV 9 0 + 24.484 0.0 0.0 2.4061 2.4061 64.715 0.0 0.0 0.0 4.78646588545098 2.3860585694618663 2.3860585694618663 2.3860585694618663 0 0.6989700043360187 0.0 0.0 0.3494850021680094 + + {[DS]|[MA]|[CV]|TT}VTE{I|L}QKV;{[DS]|[MA]|[CV]|TT}VTE{I|L}QVK;{[DS]|[MA]|[CV]|TT}VTE{I|L}[KA]GV;{[DS]|[MA]|[CV]|TT}VTE{I|L}[AG]KV;{[DS]|[MA]|[CV]|TT}VTE{I|L}[AG]VK;{[DS]|[MA]|[CV]|TT}VWDVV[KA];{[TV]|[{I|L}S]}TWDVV[KA];{[DS]|[MA]|[CV]|TT}VT{I|L}{I|L}{[QS]|[NT]}GV;{[DS]|[MA]|[CV]|TT}VT[KC][RP]{I|L} 2.4061;2.1717;1.6743;1.5012;1.2667;1.261;1.1563;0.53556;0.30455 +;-;-;-;-;-;-;-;- + 1171 + 1 1.842 85631.7 1.0 4491 4571 9063 HBL1_DMSO_200M_050219_2,9064 HBL1_DMSO_200M_050219_2,9064,TTVTELQKV True True TTVTELQKV 49.271763 509.793475329876 480319.09375 9063.0 ENSG00000102189|ENST00000322349|EEA1 5.946507771809896 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9065 49.274 76.0 663340.0 25 0 87255.0 + 41944 VQIEEVRQV 9 68 550.3087736714515 1098.602994409703 2 550.3093139529228 MULTI CID FTMS 0 0 0 9063 633628.0 0.1142972692619863 -3 0.1887245178222656 2 Unmodified _VQIEEVRQV_ ENSG00000143621|ENST00000361891|ILF2 36.506200033944 0.094635877243972 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 6 36.923 0.0 0.0 3.3609 0.0 0.0 0.0 755.3697234958935 755.3697234958935 20.725599829726416 0.0 0.0 0.0 0 1.0 1.2218487496163564 0.0 0.4247425010840047 + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3.3609 + + 46 1 1.842 46769.6 1.0 4492 4571 9063 HBL1_DMSO_200M_050219_2,9065 HBL1_DMSO_200M_050219_2,9065,VQIEEVRQV True True VQIEEVRQV 49.273527 550.309313952923 127087080.0 9063.0 ENSG00000143621|ENST00000361891|ILF2 6.532082875569661 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9066 49.28 364.0 394650.0 25 0 78050.0 + 18482 KYLTSNVAY 9 147 529.7801250803043 1057.5456972274085 2 529.7795898318291 MULTI CID FTMS 0 0 0 9063 251708.703125 0.1949809276592127 -3 0.1887245178222656 3 Unmodified _KYLTSNVAY_ ENSG00000120137|ENST00000239231|PANK3;ENSG00000125779|ENST00000610179|PANK2;ENST00000495692.5_1_20:3869620-3891228:+|nuORF;nc|ENSG00000125779|Q9BZ23-3|PANK2;nc|ENSG00000125779|Q9BZ23|PANK2;PANK2|p.P376Tfs*3|1|0.41|ENSG00000125779|chr20:3910719-3910720|-/A|frameshift_variant 62.57269311338072 0.0246576765497938 4 TSNVAY 6 3 64.998 0.0 0.0 6.1461 0.0 0.0 404.24315077949376 0.0 404.24315077949376 0.0 43.61036990732192 0.0 0.0 0 1.0 0.0 1.4604093769761874 0.7742275032520141 + TSNVAY 6.1461 + + 1043 1 1.842 117213.5 1.0 4493 4571 9063 HBL1_DMSO_200M_050219_2,9066 HBL1_DMSO_200M_050219_2,9066,KYLTSNVAY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9067 49.294 800.0 238990.0 25 0 13054.0 + + 28934 AQTEMVRTL 9 196 524.7790662444124 1047.5435795556248 2 524.7760497927666 MULTI CID FTMS 0 0 0 9063 218596.515625 1.0 0 0.0 4 Unmodified _QATMWSVLI_ ENSG00000165689|ENST00000357365|ENTR1;nc|ENSG00000165689|Q96C92-3|ENTR1;ENST00000326105.6_1_1:175013764-175014370:-|nuORF;nc|ENSG00000165689|Q96C92-4|ENTR1;nc|ENSG00000165689|Q96C92-2|ENTR1 42.09456458481378 0.0639583784996157 4 ENWMVRT{I|L} 8 -1 + 46.597 0.0 0.0 4.4482 4.4482 82.126 0.0 0.0 0.0 15.18962088921495 0.4900868069886215 0.4900868069886215 14.715532909639885 0 0.0 1.5228787452803376 0.3054621874040891 0.0 ENWMVRT{I|L};EV[NS]MVRT{I|L};[QT]AEMVRT{I|L};EVG[SG]MVRT{I|L};EGGWMVRT{I|L};E[HM]YVRT{I|L};{[TV]|[{I|L}S]}[DN]MVRT{I|L};E{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}H]|[RQ]}VRT{I|L};E{M(Oxidation (M))|F}PS[QA]RT{I|L};EV[MT][QA]RT{I|L} 4.4482;3.0434;2.7887;2.7124;2.1103;1.8675;1.8079;1.6994;1.575;1.5408 -;-;-;-;-;-;-;-;-;- 1759 + 1 1.842 148036.8 0.8799999952316284 4494 4571 9063 HBL1_DMSO_200M_050219_2,9067 HBL1_DMSO_200M_050219_2,9067,QATMWSVLI False False AQTEMVRTL 49.293915 524.776049792767 1473531.75 9063.0 ENSG00000165689|ENST00000357365|ENTR1;;nc|ENSG00000165689|Q96C92-3|ENTR1;;ENST00000326105.6_1_1:175013764-175014370:-|nuORF;;nc|ENSG00000165689|Q96C92-4|ENTR1;;nc|ENSG00000165689|Q96C92-2|ENTR1 5.954898357391357 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9068 49.301 365.0 316660.0 25 0 44795.0 + 23716 LTTSESELNSR 11 96 618.808635464397 1235.6027179955938 2 618.8090698122978 MULTI CID FTMS 0 0 0 9063 165376.109375 0.8000583409755627 -3 0.1887245178222656 5 Unmodified _LTTSESELNSR_ REV__ENST00000480461.1_1_3:185649356-185649431:-|nuORF 7.608950283845883 0.8392484121837455 4 SR 2 -1 18.583 0.0 0.0 1.504 0.0 0.0 617.3284392864126 372.1195467584594 989.447986044872 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.3494850021680094 0.3252574989159953 SR 1.504 + + 184 + 1 1.842 87511.0 1.0 4495 4571 9063 HBL1_DMSO_200M_050219_2,9068 HBL1_DMSO_200M_050219_2,9068,LTTSESELNSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9069 49.314 800.0 126470.0 25 0 8929.7 + 42017 VQQWRNWMLQ 10 126 702.8464171926021 1403.678281452004 2 702.8478881716728 MULTI CID FTMS 0 0 0 9063 160986.703125 0.6286992831357502 -2 0.1312179565429687 6 Oxidation (M) _VQQWRNWM(Oxidation (M))LQ_ ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1 43.85829265575387 0.1168243637355526 4 {[QV]|[N{I|L}]|[RA]|[KV]}NEAQT{M(Oxidation (M))|F}{I|L}N{I|L}Q 12 7 + 92.433 0.0 0.0 6.5851 6.5851 78.167 0.0 0.0 0.0 27.19634858617303 71.76604113406161 27.19634858617303 2.064211735747861 0 3.3935078169319297 2.0 0.0 0.9269359821608808 {[QV]|[N{I|L}]|[RA]|[KV]}NEAQT{M(Oxidation (M))|F}{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEA[DG]G{M(Oxidation (M))|F}{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEAQT{[VA]|[{I|L}G]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEA[DG]G{[VA]|[{I|L}G]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEA[DG]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEAQT{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE{[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F}{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEA[DG]G{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEA[DG]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}GGEAQT{M(Oxidation (M))|F}{I|L}N{I|L}Q 6.5851;6.438;6.4022;6.257;6.2109;6.1435;6.0375;5.9964;5.9522;5.9369 -;-;-;-;-;-;-;-;-;- 7227 1 1.842 76311.8 0.7200000286102295 4496 4571 9063 HBL1_DMSO_200M_050219_2,9069 HBL1_DMSO_200M_050219_2,9069,VQQWRNWMLQ True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9070 49.322 409.0 263590.0 25 0 15165.0 1023 AGDAVVAKP 9 126 414.2345461787473 826.4545394242946 2 414.2350341677666 MULTI CID FTMS 0 0 0 9063 128402.9296875 0.7240459425990644 3 -0.2036819458007812 7 Unmodified _AGDAVVAKP_ ENSG00000142444|ENST00000270502|TIMM29 20.453626601364224 0.2830276176381075 4 [AG]AGD{I|L}PKV 9 6 + 49.544 0.0 0.0 5.9948 5.9948 83.786 0.0 0.0 0.0 20.53796377619108 9.582803521690836 9.582803521690836 8.042359562158126 0 0.3252574989159953 2.0 0.0 0.2059771852360797 [AG]AGD{I|L}PKV;[AG]ADVAPKV;[AG]QD{I|L}PKV;[AG]ADV[KG]P{I|L};[AG]ADV[KG]{I|L}P;[AG][RK]P{[DS]|[MA]|[CV]|TT}P 5.9948;5.0217;4.8174;2.1676;2.0642;1.3784 -;-;-;-;-;- 286 + 1 1.842 86745.8 1.0 4497 4571 9063 HBL1_DMSO_200M_050219_2,9070 HBL1_DMSO_200M_050219_2,9070,AGDAVVAKP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9071 49.331 542.0 234090.0 25 0 22407.0 + 22007 LPPPPPHAL 9 135 469.7768488850695 937.539144836939 2 469.7770873904228 MULTI CID FTMS 0 0 0 9063 109309.40625 0.5251780690061174 -20 1.5825653076171875 8 Unmodified _LPPPPPHAL_ ENSG00000119669|ENST00000238647|IRF2BPL 67.41302359171755 0.0220989861905124 4 {I|L}PPPPPHA{I|L} 9 0 + 79.378 0.0 0.0 8.4667 8.4667 95.038 0.0 0.0 0.0 55.25621490810046 11.382805414149786 11.382805414149786 13.187587626244124 0 0.805462187404089 2.0 0.0 0.0 + + {I|L}PPPPPHA{I|L};{I|L}PPPP[YR]V;{I|L}PP[YK]HA{I|L};{I|L}PPP[YR]PV;{I|L}P[YK]PHA{I|L};{I|L}PPP[YR]VP;{I|L}P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[H{I|L}]S{I|L};{I|L}P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[H{I|L}]TV;{I|L}P[YK][YR]V;{I|L}[YK]PPHA{I|L} 8.4667;7.06;6.739;6.4797;5.771;5.3364;5.2721;5.2721;4.3717;3.1847 +;-;-;-;-;-;-;-;-;- + 1198 + 1 1.842 102627.9 1.0 4498 4571 9063 HBL1_DMSO_200M_050219_2,9071 HBL1_DMSO_200M_050219_2,9071,LPPPPPHAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9072 49.346 800.0 101260.0 25 0 5175.7 36499 TAEGTWFEPNH 11 112 644.7807903714036 1287.547027809607 2 644.7819091677666 MULTI CID FTMS 0 0 0 9063 90881.3671875 1.0 0 0.0 9 Unmodified _TAEGTWFEPNH_ ENSG00000175029|ENST00000309035|CTBP2 12.240655878213236 0.7805268987462184 4 [TP]VSQ[C(Carbamidomethyl (C))Q]DA[WP] 11 10 + 43.292 0.0 0.0 3.3624 3.3624 74.788 0.0 0.0 0.0 10.030834337684304 7.367585652254178 7.367585652254178 9.128498242810998 0 0.0 0.8538719643217619 1.5044321917401078 0.0 [TP]VSQ[C(Carbamidomethyl (C))Q]DA[WP];[TP]VS[AG][C(Carbamidomethyl (C))Q]DA[WP];[TA]D[KP][C(Carbamidomethyl (C))Q]DA[WP];[TA]D{[QD]|[EN]|[WG]|[KD]|[RS]}NRDA[WP];{[TV]|[{I|L}S]}PSQ[C(Carbamidomethyl (C))Q]DA[WP];[TA]DA[DG]NRDA[WP];[TA]D{[QD]|[EN]|[WG]|[KD]|[RS]}NRW[WP];{NN|[MP]|[D{I|L}]|[EV]}[VG]Q[C(Carbamidomethyl (C))Q]DA[WP];{NN|[MP]|[D{I|L}]|[EV]}NVA[C(Carbamidomethyl (C))Q]DA[WP];[TA]DA[DG]NRW[WP] 3.3624;2.6534;2.5833;2.3065;2.196;2.1636;1.7957;1.768;1.6952;1.6501 -;-;-;-;-;-;-;-;-;- 724 1 1.842 63580.8 0.6100000143051147 4499 4571 9063 HBL1_DMSO_200M_050219_2,9072 HBL1_DMSO_200M_050219_2,9072,TAEGTWFEPNH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9074 49.35 11.0 5743300.0 25 0 1056100.0 + 32350 RYPDSILEH 9 49 565.2850900641672 1128.5556271951343 2 565.2856933474541 MULTI CID FTMS 0 0 0 9073 6393162.5 1.0 0 0.0 1 Unmodified _RYPDSILEH_ ENSG00000104738|ENST00000649973|MCM4 47.594388314883695 0.0456443387682827 4 [YR][DP]S{I|L}{I|L}EH 9 0 + 64.231 0.0 0.0 5.6914 5.6914 89.426 0.0 0.0 0.0 8.217196696094433 53.26151861349551 8.217196696094433 42.77433463803845 0 1.805462187404089 0.0 0.0 0.7302046884880937 + + [YR][DP]S{I|L}{I|L}EH;[YR][DP]S{I|L}[QP][PG] 5.6914;1.9012 +;- + 65 1 1.842 54318.3 1.0 4500 4572 9073 HBL1_DMSO_200M_050219_2,9074 HBL1_DMSO_200M_050219_2,9074,RYPDSILEH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9075 49.352 25.0 2737900.0 25 0 302140.0 + 4977 DGRLVINRV 9 72 347.8772069049133 1040.60979131494 3 347.8768493533134 MULTI CID FTMS 0 0 0 9073 2782548.0 0.9821027436459578 1 -0.0522117614746093 2 Unmodified _DGRLVINRV_ ENSG00000032389|ENST00000382125|EIPR1;ENST00000496433.5_1_2:3193107-3197993:-|nuORF 35.61225514009592 0.0995432151795903 4 V{I|L}VNR 5 5 39.227 0.0 0.0 3.7696 0.0 0.0 441.2345604573212 0.0 441.2345604573212 0.0 28.769184659718547 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.3252574989159953 V{I|L}VNR 3.7696 - 79 + 1 1.842 61888.5 1.0 4501 4572 9073 HBL1_DMSO_200M_050219_2,9075 HBL1_DMSO_200M_050219_2,9075,DGRLVINRV True True DGRLVINRV 49.351547 347.876849353313 46323688.0 9073.0 ENST00000496433.5_1_2:3193107-3197993:-|nuORF;;ENSG00000032389|ENST00000382125|EIPR1 4.083556572596232 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9076 49.353 19.0 3086400.0 25 0 526390.0 + 22025 LPPPPPPAM 9 78 458.751710776598 915.488868619996 2 458.7517883181572 MULTI CID FTMS 0 0 0 9073 3231942.5 0.730733072613143 -8 0.5609550476074219 3 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 4 [{I|L}P]PPPP 6 3 47.669 0.0 0.0 5.2069 0.0 0.0 0.0 314.11732370498504 314.11732370498504 12.641368885835211 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.2069 + + 254 1 1.842 51136.2 1.0 4502 4572 9073 HBL1_DMSO_200M_050219_2,9076 HBL1_DMSO_200M_050219_2,9076,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9077 49.354 30.0 1882100.0 25 0 323910.0 + 22414 LPTEQPRL 8 65 477.2745714832953 952.5345900333906 2 477.2745849490166 MULTI CID FTMS 0 0 0 9073 2547314.0 0.964017842917386 1 -0.0522117614746093 4 Unmodified _LPTEQPRL_ ENSG00000102977|ENST00000620761|ACD;ENST00000602423.1_1_16:67693438-67694029:-|nuORF;ENST00000602622.5_1_16:67693438-67693558:-|nuORF;ENST00000602860.5_1_16:67693438-67694150:-|nuORF;ENST00000602945.5_1_16:67692675-67693876:-|nuORF;nc|ENSG00000102977|Q96AP0-2|ACD 22.736283301280096 0.5659792798204337 4 {I|L}PTEQ[R{I|L}]P 8 2 + 67.427 0.0 0.0 7.0787 7.0787 90.489 0.0 0.0 0.0 46.00070743973532 1.726307269461742 1.726307269461742 9.262137858390815 0 0.3494850021680094 2.0 0.4247425010840047 0.0 {I|L}PTEQ[R{I|L}]P;{I|L}PTE[AG][R{I|L}]P 7.0787;6.1064 -;- 53 + 1 1.842 49244.3 1.0 4503 4572 9073 HBL1_DMSO_200M_050219_2,9077 HBL1_DMSO_200M_050219_2,9077,LPTEQPRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9078 49.355 24.0 1722500.0 25 0 99835.0 + 21132 LPAPPTQNM 9 88 484.7471199658434 967.4796869984868 2 484.7473022341728 MULTI CID FTMS 0 0 0 9073 2500098.75 0.5984943673431281 -4 0.27508544921875 5 Unmodified _LPAPPTQNM_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 61.357469665136826 0.0253304979873734 4 [{I|L}P]APPTQNM 9 0 + 64.675 0.0 0.0 6.6849 6.6849 84.699 0.0 0.0 0.0 6.232492903979008 14.973024840566469 6.232492903979008 6.232492903979008 0 1.305462187404089 1.5228787452803376 0.5 0.0 + + [{I|L}P]APPTQNM;[PA]{I|L}PPTQNM;[{I|L}P]APPT[AG]NM;[{I|L}P]APPTQGGM;[PA]{I|L}PPT[AG]NM;[PA]{I|L}PPTQGGM;[{I|L}P]APPT[AG]GGM;[PA]{I|L}PPT[AG]GGM;[{I|L}P]AP{[SA]|[TG]}[PA]NM;[PA]{I|L}P{[SA]|[TG]}[PA]NM 6.6849;6.0407;5.7332;5.7332;5.089;5.089;4.7859;4.1417;3.4603;2.8161 +;-;-;-;-;-;-;-;-;- + 235 1 1.842 38883.1 1.0 4504 4572 9073 HBL1_DMSO_200M_050219_2,9078 HBL1_DMSO_200M_050219_2,9078,LPAPPTQNM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9079 49.356 14.0 3117200.0 25 0 343420.0 + + 21812 RQGPEGLEV 9 63 492.777769218097 983.540985502994 2 492.7776977419853 MULTI CID FTMS 0 0 0 9073 1775626.625 1.0 0 0.0 6 Unmodified _LPNKREVE_ ENSG00000172922|ENST00000308418|RNASEH2C 16.942295170755138 0.6606234159769251 4 {I|L}PD 3 -1 37.58 0.0 0.0 3.8209 0.0 0.0 0.0 655.3530977444894 655.3530977444894 20.62489778226327 0.0 0.0 0.0 0 0.2887254899964357 1.3010299956639813 0.0 0.0 {I|L}PD 3.8209 - 60 + 1 1.842 40173.9 1.0 4505 4572 9073 HBL1_DMSO_200M_050219_2,9079 HBL1_DMSO_200M_050219_2,9079,LPNKREVE False False RQGPEGLEV 49.356262 492.777697741985 26526268.0 9073.0 ENSG00000172922|ENST00000308418|RNASEH2C 3.245861609776815 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9080 49.357 34.0 1674500.0 25 0 127140.0 + 3638 DAEAKFREI 9 57 539.7798419477473 1077.5451309622945 2 539.7797729372978 MULTI CID FTMS 0 0 0 9073 1873469.875 0.7534463132215364 1 -0.0522117614746093 7 Unmodified _DAEAKFREI_ ENSG00000128590|ENST00000249356|DNAJB9;ENST00000465725.1_1_7:108212170-108215134:+|nuORF;ENST00000491582.1_1_7:108210452-108212392:+|nuORF 32.037481411007896 0.1235546156350648 4 DAEAK{M(Oxidation (M))|F}{[RE]|[WV]}{I|L} 9 0 + 74.417 0.0 0.0 6.9061 6.9061 94.75 0.0 0.0 0.0 54.95291079950914 0.0436480540245014 0.0436480540245014 74.4168609512698 0 1.424742501084005 1.6989700043360187 0.5 0.0 + + DAEAK{M(Oxidation (M))|F}{[RE]|[WV]}{I|L} 6.9061 + + 54 + 1 1.842 49630.1 1.0 4506 4572 9073 HBL1_DMSO_200M_050219_2,9080 HBL1_DMSO_200M_050219_2,9080,DAEAKFREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9081 49.359 23.0 1906500.0 25 0 261400.0 + 45524 YTTDRVMTV 9 81 543.2701967864405 1084.5258406396808 2 543.2684814333916 MULTI CID FTMS 0 0 0 9073 1856413.25 0.695674475085989 -2 0.1322784423828125 8 Unmodified _YTTDRVMTV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000523334.1_1_6:114270238-114277280:-|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 43.9818466556824 0.0535980856389242 4 YTTD 4 5 53.276 0.0 0.0 4.9124 0.0 0.0 0.0 601.3161715143186 601.3161715143186 19.557590237807567 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.0 + YTTD 4.9124 + + 136 + 1 1.842 39422.6 1.0 4507 4572 9073 HBL1_DMSO_200M_050219_2,9081 HBL1_DMSO_200M_050219_2,9081,YTTDRVMTV True True YTTDRVMTV 49.35862 543.268481433392 45677944.0 9073.0 ENSG00000196591|ENST00000519065|HDAC2;;ENST00000523334.1_1_6:114270238-114277280:-|nuORF;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENSG00000116478|ENST00000373548|HDAC1 7.134633858998616 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9082 49.36 62.0 1481600.0 25 0 137350.0 + 25679 NGPVDLKKI 9 102 328.53482052882384 982.5826321866716 3 328.5341369509697 MULTI CID FTMS 0 0 0 9073 811674.75 0.7408821628006163 -2 0.1322784423828125 9 Unmodified _NGPVDLKKI_ ENSG00000164305|ENST00000308394|CASP3 10.799506525563784 0.5443532743200366 4 [NG]PVD{I|L}KK{I|L} 9 0 + 54.376 0.0 0.0 5.534 5.534 87.183 0.0 0.0 0.0 43.89162876794983 9.87765543582988 9.87765543582988 18.750612633917 0 0.1803115997617927 0.7958800173440752 0.0 0.0 + + [NG]PVD{I|L}KK{I|L};[NG]P{I|L}[DV]KK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[PG][DV]KK{I|L};[K{I|L}]K[{M(Oxidation (M))|F}V]V{[{M(Oxidation (M))|F}C]|[YS]};KK{I|L}[{M(Oxidation (M))|F}V]V{[{M(Oxidation (M))|F}C]|[YS]};{[QV]|[N{I|L}]|[RA]|[KV]}[PG][WR]K{I|L} 5.534;3.6257;0.72391;0.34941;0.23833;0.064612 +;-;-;-;-;- + 92 + 1 1.842 75176.4 1.0 4508 4572 9073 HBL1_DMSO_200M_050219_2,9082 HBL1_DMSO_200M_050219_2,9082,NGPVDLKKI False True NGPVDLKKI 49.360139 328.53413695097 9001129.0 9073.0 ENSG00000164305|ENST00000308394|CASP3 4.515425523122151 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9083 49.362 73.0 889410.0 25 0 210630.0 + 45900 YYSPHGHIL 9 83 362.850457651857 1085.5295435557712 3 362.8502075076103 MULTI CID FTMS 0 0 0 9073 730095.625 0.5091787055530609 3 -0.2158126831054687 10 Unmodified _YYSPHGHIL_ ENSG00000144895|ENST00000460851|EIF2A;nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A 32.116972079565 0.1225432171549407 4 YYSPHGH{I|L}{I|L} 9 0 + 58.542 0.0 0.0 5.393 5.393 87.555 0.0 0.0 0.0 25.415703523873667 11.962724883926654 11.962724883926654 28.866231628152686 0 0.5 2.0 0.0 0.0 + + YYSPHGH{I|L}{I|L};{[HG]|PP}HPSYY{I|L}{I|L};YYSP{[NV]|[RG]}[KC]{I|L} 5.393;2.7338;2.587 +;-;- + 132 + 1 1.842 59752.0 1.0 4509 4572 9073 HBL1_DMSO_200M_050219_2,9083 HBL1_DMSO_200M_050219_2,9083,YYSPHGHIL True True YYSPHGHIL 49.361829 362.85020750761 31780975.0 9073.0 nc|ENSG00000144895|Q9BY44-2|EIF2A;;nc|ENSG00000144895|Q9BY44-4|EIF2A;;nc|ENSG00000144895|Q9BY44-3|EIF2A;;ENSG00000144895|ENST00000460851|EIF2A 7.954141298929851 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9084 49.364 111.0 583630.0 25 0 54701.0 -1 LPPPPPPAM 9 103 466.7492067760757 931.4838606189514 2 466.7472106814384 MULTI CID FTMS 0 0 0 9073 414196.28125 0.593880507896418 -3 0.2175788879394531 11 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 79.93452657146344 0.0175326119056068 4 [{I|L}P]PPPPD 7 -1 47.158 0.0 0.0 5.0627 0.0 0.0 0.0 215.07685313287644 215.07685313287644 13.8375789050216 0.0 0.0 0.0 0 1.75 1.6989700043360187 0.3494850021680094 0.0 [{I|L}P]PPPPD 5.0627 - 550 1 1.842 55182.6 1.0 4510 4572 9073 HBL1_DMSO_200M_050219_2,9084 HBL1_DMSO_200M_050219_2,9084,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9085 49.367 169.0 413960.0 25 0 52842.0 + -1 MLLPAQTL 8 84 451.7527688641812 901.4909847951624 2 451.7526733279228 MULTI CID FTMS 0 0 0 9073 387293.21875 0.705637856867609 18 -1.2123451232910156 12 Oxidation (M) _M(Oxidation (M))LLPAQTL_ REV__nc|nan|Q9UFG5-2|C19orf25 28.486842064014134 0.4448922141344407 4 YP{I|L}{M(Oxidation (M))|F}KV 6 -1 55.227 0.0 0.0 6.1262 0.0 0.0 0.0 151.0519960992797 151.0519960992797 41.247293946369794 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YP{I|L}{M(Oxidation (M))|F}KV 6.1262 - 187 + 1 1.842 59026.8 1.0 4511 4572 9073 HBL1_DMSO_200M_050219_2,9085 HBL1_DMSO_200M_050219_2,9085,MLLPAQTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9086 49.371 198.0 349800.0 25 0 56707.0 + 38865 TVISEDSVVKA 11 82 574.3135511766133 1146.6125494200264 2 574.3145019412041 MULTI CID FTMS 0 0 0 9073 369556.125 0.3600923796305144 2 -0.1173210144042968 13 Unmodified _TVISEDSVVKA_ ENSG00000102384|ENST00000682095|CENPI;nc|ENSG00000102384|Q92674-2|CENPI 34.221707139014875 0.3014076866608453 4 {[TV]|[{I|L}S]}{I|L}SED[VS]V[KA] 11 0 + 53.285 0.0 0.0 4.6472 4.6472 75.588 0.0 0.0 0.0 40.79388142682946 4.2003358103491735 4.2003358103491735 5.460025441274752 0 0.7134679910804405 2.0 0.4247425010840047 0.8494850021680094 + + {[TV]|[{I|L}S]}{I|L}SED[VS]V[KA];{[TV]|[{I|L}S]}{I|L}S[TA]EEV[KA];{[TV]|[{I|L}S]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EEV[KA] 4.6472;4.171;3.2271 +;-;- + 111 + 1 1.842 55056.8 1.0 4512 4572 9073 HBL1_DMSO_200M_050219_2,9086 HBL1_DMSO_200M_050219_2,9086,TVISEDSVVKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9087 49.374 127.0 632010.0 25 0 72573.0 + 32352 RYPDSILEH 9 106 377.1928095369017 1128.5565992109052 3 377.1926452517509 MULTI CID FTMS 0 0 0 9073 352580.5 0.6256693216420514 -1 0.0863609313964843 14 Unmodified _RYPDSILEH_ ENSG00000104738|ENST00000649973|MCM4 53.832793166522166 0.0319663582346103 4 S{I|L}{I|L}EH 5 4 44.17 0.0 0.0 3.9139 0.0 0.0 531.243502142349 0.0 531.243502142349 0.0 36.2113751626007 0.0 0.0 0 1.5 0.0 0.6747425010840047 0.0 + S{I|L}{I|L}EH 3.9139 + + 131 + 1 1.842 70309.7 1.0 4513 4572 9073 HBL1_DMSO_200M_050219_2,9087 HBL1_DMSO_200M_050219_2,9087,RYPDSILEH True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9088 49.377 172.0 482310.0 25 0 21266.0 + 34755 SQAIAFQQA 9 108 482.2482455321229 962.4819381310458 2 482.2483093142509 MULTI CID FTMS 0 0 0 9073 337842.09375 1.0 0 0.0 15 Unmodified _SQAIAFQQA_ ENSG00000139168|ENST00000266529|ZCRB1 16.149105407346934 0.3995459350917656 4 [AG]SA{I|L}A 6 6 27.85 0.0 0.0 2.8936 0.0 0.0 0.0 489.2092995414552 489.2092995414552 14.99604226311038 0.0 0.0 0.0 0 0.0 2.0 0.2614393726401688 0.0 [AG]SA{I|L}A 2.8936 - 377 1 1.842 68483.2 1.0 4514 4572 9073 HBL1_DMSO_200M_050219_2,9088 HBL1_DMSO_200M_050219_2,9088,SQAIAFQQA False True SQAIAFQQA 49.377193 482.248309314251 2304658.5 9073.0 ENSG00000139168|ENST00000266529|ZCRB1 1.4268565873305004 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9089 49.38 110.0 972710.0 25 0 113360.0 24229 MALGSDPRV 9 123 473.2463660004781 944.4781790677562 2 473.2465087771416 MULTI CID FTMS 0 0 0 9073 334327.65625 0.2110208773778517 3 -0.2158126831054687 16 Unmodified _MALGSDPRV_ ENSG00000150977|ENST00000280571|RILPL2 14.838274106304384 0.4350285940865338 4 [K{I|L}]YEGQ[HA] 8 8 + 39.963 0.0 0.0 4.2312 4.2312 73.945 0.0 0.0 0.0 5.406075122407692 0.6694678963061307 0.6694678963061307 5.406075122407692 0 0.0 0.744727494896694 0.9674165578762486 0.4247425010840047 [K{I|L}]YEGQ[HA];[YE][K{I|L}]GQ[HA];[Y{I|L}]KEGQ[HA];[K{I|L}]YEG[AG][HA];[EP]QGY[RP]V;[EP]QGYV[RP];[YE][K{I|L}]G[AG][HA];[K{I|L}]YWQ[HA];[Y{I|L}]KEG[AG][HA];[AG]GEY[K{I|L}][HA] 4.2312;3.6588;3.2962;3.2505;2.7771;2.7371;2.6781;2.5282;2.3156;2.2348 -;-;-;-;-;-;-;-;-;- 826 1 1.842 84761.3 1.0 4515 4572 9073 HBL1_DMSO_200M_050219_2,9089 HBL1_DMSO_200M_050219_2,9089,MALGSDPRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9090 49.385 274.0 311830.0 25 0 20366.0 + 45114 YPYQVVRA 8 119 498.2689682620039 0 498.2688781619072 PEAK CID FTMS 0 0 0 9073 229663.0 0.9084651531217576 -1 0.0863609313964843 17 Unmodified _YPYQVVRA_ ENSG00000164933|ENST00000297578|SLC25A32;ENST00000523701.1_1_8:104413742-104414267:-|nuORF 28.486842064014134 0.2575685520298453 4 PYQVV 5 3 24.68 0.0 0.0 2.4816 0.0 0.0 163.06147583035573 242.1268557184204 405.1883315487761 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + PYQVV 2.4816 + + 162 + 1 1.842 69034.9 1.0 4516 4572 9073 HBL1_DMSO_200M_050219_2,9090 HBL1_DMSO_200M_050219_2,9090,YPYQVVRA False True YPYQVVRA 49.384556 498.268878161907 5747534.0 9073.0 ENST00000523701.1_1_8:104413742-104414267:-|nuORF;;ENSG00000164933|ENST00000297578|SLC25A32 4.951673189798991 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9091 49.398 800.0 108130.0 25 0 17924.0 + -1 CHKNRWHHCHC 11 85 837.3407219337812 1672.6668909343623 2 837.8434936404228 MULTI CID FTMS 0 0 0 9073 102928.046875 0.7006903199379064 -3 0.2175788879394531 18 Acetyl (Protein N-term),3 Carbamidomethyl (C) _(Acetyl (Protein N-term))C(Carbamidomethyl (C))HKNRWHHC(Carbamidomethyl (C))HC(Carbamidomethyl (C))_ REV__ENST00000354725.7_1_7:127484450-127527966:+|nuORF 0.0 0.8751479354844584 4 EVGS[DC]V 7 -1 34.041 0.0 0.0 2.0351 0.0 0.0 965.3877847854118 0.0 965.3877847854118 0.0 8.401469046028804 0.0 0.0 0 0.0 0.0 1.4489700043360187 0.0 EVGS[DC]V 2.0351 - 596 + 1 1.842 62649.7 0.699999988079071 4517 4572 9073 HBL1_DMSO_200M_050219_2,9091 HBL1_DMSO_200M_050219_2,9091,CHKNRWHHCHC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9093 49.403 0.98 39278000.0 25 0 4695500.0 + 16999 KIYEGQVEV 9 63 532.7848608794221 1063.5551688256442 2 532.7855102419853 MULTI CID FTMS 0 0 0 9092 61745536.0 1.0 0 0.0 1 Unmodified _KIYEGQVEV_ ENSG00000122406|ENST00000370321|RPL5;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 32.78568957990786 0.1150597335874693 4 {[QG]|[NA]}EY[K{I|L}]VEV 9 6 + 55.666 0.0 0.0 5.2339 5.2339 84.098 0.0 0.0 0.0 4.137342758552691 46.20174676113472 4.137342758552691 11.064921830680705 0 0.8252574989159953 0.0 0.7302046884880937 0.4247425010840047 {[QG]|[NA]}EY[K{I|L}]VEV;{[QG]|[NA]}EYV[K{I|L}]EV;{[QG]|[NA]}EVY[K{I|L}]EV;{[QG]|[NA]}VEY[K{I|L}]EV;[YE]{[QG]|[NA]}[K{I|L}]VEV;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}Y[K{I|L}]EV;[YE][K{I|L}]{[QG]|[NA]}VEV;[YE]{[QG]|[NA]}V[K{I|L}]EV 5.2339;4.1936;4.1936;3.5819;3.3342;2.9511;2.8856;2.2939 -;-;-;-;-;-;-;- 119 1 1.833 41604.9 1.0 4518 4573 9092 HBL1_DMSO_200M_050219_2,9093 HBL1_DMSO_200M_050219_2,9093,KIYEGQVEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9094 49.404 40.0 875950.0 25 0 103950.0 + 21047 LPADTVQRI 9 61 506.7940332638688 1011.5735135945376 2 506.7942077517509 MULTI CID FTMS 0 0 0 9092 1254154.625 1.0 0 0.0 2 Unmodified _LPADTVQRI_ ENSG00000115919|ENST00000264170|KYNU;nc|ENSG00000115919|Q16719-2|KYNU 38.17557092003332 0.0854718145212029 4 {I|L}PEGTV 6 5 73.761 0.0 0.0 7.2917 0.0 0.0 0.0 412.2305944402008 412.2305944402008 53.47032539791456 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.4247425010840047 0.0 {I|L}PEGTV 7.2917 - 73 + 1 1.833 37698.6 1.0 4519 4573 9092 HBL1_DMSO_200M_050219_2,9094 HBL1_DMSO_200M_050219_2,9094,LPADTVQRI True True LPADTVQRI 49.403762 506.794207751751 8686370.0 9092.0 nc|ENSG00000115919|Q16719-2|KYNU;;ENSG00000115919|ENST00000264170|KYNU 4.888069152832031 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9095 49.405 55.0 2318600.0 25 0 257530.0 39596 VDEDCPEG 8 92 432.1583799093892 862.3022068855784 2 432.1584350466728 MULTI CID FTMS 0 0 0 9092 1176637.25 0.7991185592482981 -2 0.1385726928710937 3 Unmodified _VDEDCPEG_ ENSG00000099957|ENST00000413302|P2RX6;nc|ENSG00000099957|O15547-2|P2RX6 13.50788311687929 0.7113601687236069 4 VDE 3 5 31.995 0.0 0.0 3.7104 0.0 0.0 0.0 516.1421602838499 516.1421602838499 12.530834337684311 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 + VDE 3.7104 + + 27 + 1 1.833 102333.0 1.0 4520 4573 9092 HBL1_DMSO_200M_050219_2,9095 HBL1_DMSO_200M_050219_2,9095,VDEDCPEG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9096 49.407 64.0 1094200.0 25 0 130420.0 + 4597 DAYTHPQF 8 107 489.7197195403264 977.4248861474528 2 489.7198364138603 MULTI CID FTMS 0 0 0 9092 1051648.0 1.0 0 0.0 4 Unmodified _DAYTHPQF_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 39.957323273325 0.2350051964751539 4 {[DA]|[EG]}YTHPQ{M(Oxidation (M))|F} 8 0 + 68.237 0.0 0.0 6.9813 6.9813 92.507 0.0 0.0 0.0 43.325097333828566 12.914930551903224 12.914930551903224 16.876531584792502 0 0.4247425010840047 2.0 0.0 0.7614393726401688 + + {[DA]|[EG]}YTHPQ{M(Oxidation (M))|F};{[DA]|[EG]}YTHP[AG]{M(Oxidation (M))|F};{[DA]|[EG]}YTH{M(Oxidation (M))|F}[QP];{[DA]|[EG]}YTH{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;W[DN][TA]PQ{M(Oxidation (M))|F};{[DA]|[EG]}YT{[VA]|[{I|L}G]}[HC]V;{[DA]|[EG]}[R{M(Oxidation (M))|F}][WH]{M(Oxidation (M))|F};W[DN]V[MN]S{I|L};W[DN][TA]{M(Oxidation (M))|F}[QP];{[DA]|[EG]}[DN][YR][QP] 6.9813;5.2547;5.0806;4.6447;3.6372;2.6917;2.1979;1.8177;1.7365;1.4703 +;-;-;-;-;-;-;-;-;- + 255 + 1 1.833 60721.0 1.0 4521 4573 9092 HBL1_DMSO_200M_050219_2,9096 HBL1_DMSO_200M_050219_2,9096,DAYTHPQF False True DAYTHPQF 49.406706 489.71983641386 20145712.0 9092.0 ENST00000444025.1_1_7:23602199-23602811:-|nuORF;;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;;ENST00000515678.5_1_4:146042303-146044753:+|nuORF;;ENSG00000164163|ENST00000296577|ABCE1 8.171189626057943 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9097 49.409 92.0 811740.0 25 0 129340.0 + 45922 YYVNRDTL 8 78 522.2607600581755 1042.506967183151 2 522.2614623904228 MULTI CID FTMS 0 0 0 9092 616799.4375 0.9188293145997054 1 -0.0651092529296875 5 Unmodified _YYVNRDTL_ ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10 13.90604991867851 0.7054780292895731 4 YYV 3 5 50.445 0.0 0.0 4.8388 0.0 0.0 0.0 614.2922301992716 614.2922301992716 36.113007135575074 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YYV 4.8388 + + 30 + 1 1.833 62855.0 1.0 4522 4573 9092 HBL1_DMSO_200M_050219_2,9097 HBL1_DMSO_200M_050219_2,9097,YYVNRDTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9098 49.411 85.0 866720.0 25 0 63634.0 + 33277 SFPHTTPSM 9 116 502.7291644123043 1003.4437758914088 2 502.7297241091728 MULTI CID FTMS 0 0 0 9092 504769.875 0.8277580753968132 1 -0.0651092529296875 6 Unmodified _SFPHTTPSM_ ENSG00000197111|ENST00000546463|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 46.020951573049366 0.0490941689151868 4 PSM 3 6 32.224 0.0 0.0 3.2113 0.0 0.0 670.3079859517587 0.0 670.3079859517587 0.0 7.1382467949933925 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 + PSM 3.2113 + + 265 + 1 1.833 59859.3 1.0 4523 4573 9092 HBL1_DMSO_200M_050219_2,9098 HBL1_DMSO_200M_050219_2,9098,SFPHTTPSM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9099 49.413 124.0 472100.0 25 0 63555.0 + 21589 LPKNPEHFV 9 90 360.86632110388456 1079.5771339118537 3 360.8661071658134 MULTI CID FTMS 0 0 0 9092 451699.84375 0.6522159847118325 3 -0.2940101623535156 7 Unmodified _LPKNPEHFV_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 10.073929032068715 0.563993802247229 4 {I|L}[KP]N[C(Carbamidomethyl (C))K]NP 8 5 20.935 0.0 0.0 1.9392 0.0 0.0 0.0 125.07261072330311 125.07261072330311 -3.634541343817759 0.0 -3.634541343817759 0.0 0 0.0 0.0 0.0 0.3054621874040891 {I|L}[KP]N[C(Carbamidomethyl (C))K]NP 1.9392 - 460 + 1 1.833 55125.9 1.0 4524 4573 9092 HBL1_DMSO_200M_050219_2,9099 HBL1_DMSO_200M_050219_2,9099,LPKNPEHFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9100 49.417 177.0 872410.0 25 0 202310.0 44702 YPGGECSH 8 71 849.3172438877721 848.309967421172 1 849.3206664919853 MULTI CID FTMS 0 0 0 9092 237282.484375 0.7160128804323175 -2 0.1385726928710937 8 Unmodified _YPGGECSH_ ENSG00000112238|ENST00000369215|PRDM13 2.889219685676258 0.8067950007271085 4 VEV 3 7 23.288 0.0 0.0 2.7453 0.0 0.0 503.124803611525 0.0 503.124803611525 0.0 14.30909368620867 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 VEV 2.7453 - 59 1 1.833 109348.7 1.0 4525 4573 9092 HBL1_DMSO_200M_050219_2,9100 HBL1_DMSO_200M_050219_2,9100,YPGGECSH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9101 49.422 297.0 489890.0 25 0 38112.0 + 29255 QGYRMPRV 8 156 336.1802057734825 1005.5187879206476 3 336.1800720095634 MULTI CID FTMS 0 0 0 9092 254013.53125 0.7577058061894033 1 -0.0651092529296875 9 Unmodified _QGYRMPRV_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 12.240655878213236 0.7300809844188293 4 QGYVRMPR 8 2 + 41.181 0.0 0.0 4.0955 4.0955 69.948 0.0 0.0 0.0 24.587477265021025 2.32217321836837 2.32217321836837 3.0102999566398125 0 0.0 0.0 0.0 0.0 QGYVRMPR;QGYRMVPR;QGYRVMPR;QGYVRMRP;QGYRVMRP;QGYRMVRP;QGYRM[RP]V;QGYVGV[TP]SV;QV[YG]RMPR;QGYVR[TP]SV 4.0955;3.7961;3.7961;3.7824;3.4831;3.4831;3.1034;3.1034;2.8295;2.7531 -;-;-;-;-;-;+;-;-;- + 629 + 1 1.833 117037.1 1.0 4526 4573 9092 HBL1_DMSO_200M_050219_2,9101 HBL1_DMSO_200M_050219_2,9101,QGYRMPRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9102 49.436 794.0 239280.0 25 0 26929.0 5595 DNDDDNGN 8 188 439.6413213711631 877.2680898091262 2 439.6408874392509 MULTI CID FTMS 0 0 0 9092 240455.578125 0.8152773329148826 -2 0.1385726928710937 10 Unmodified _DNDDDNGN_ ENSG00000147174|ENST00000373696|GCNA 11.640296217721598 0.738950129755968 4 CVAS 4 8 33.321 0.0 0.0 3.7982 0.0 0.0 0.0 514.1060274713499 514.1060274713499 12.174165578762484 0.0 0.0 0.0 0 0.0 0.0 1.305462187404089 0.0 CVAS 3.7982 - 131 + 1 1.833 148964.2 1.0 4527 4573 9092 HBL1_DMSO_200M_050219_2,9102 HBL1_DMSO_200M_050219_2,9102,DNDDDNGN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9103 49.45 800.0 216520.0 25 0 30379.0 + 45971 YYYPKQQGL 9 127 580.2930506813964 1158.571548429593 2 580.2953369021416 MULTI CID FTMS 0 0 0 9092 170420.875 0.4932107270684154 -2 0.1385726928710937 11 Unmodified _YYYPKQQGL_ ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-1|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-23|TAF1;nc|ENSG00000147133|P21675-24|TAF1;nc|ENSG00000147133|P21675-25|TAF1;nc|ENSG00000147133|P21675|TAF1 67.34385681178166 0.0221257235307089 4 YYYPKQQG{I|L} 9 0 + 81.23 0.0 0.0 7.0112 7.0112 89.475 0.0 0.0 0.0 36.47817481888638 9.344984512435689 9.344984512435689 9.208187539523747 0 0.4247425010840047 2.0 0.0 1.0941876774005248 + + YYYPKQQG{I|L};YYYPKQ[AG]G{I|L};YYYPK[AG]QG{I|L};YYYPKQQAV;YY{I|L}{M(Oxidation (M))|F}KQQG{I|L};YYYPK[AG]QAV;YYYPKQ[AG]AV;YYYP[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};YY{I|L}{M(Oxidation (M))|F}KQ[AG]G{I|L};YY{I|L}{M(Oxidation (M))|F}K[AG]QG{I|L} 7.0112;6.2165;6.2165;6.2046;6.0413;5.4099;5.4099;5.409;5.2465;5.2465 +;-;-;-;-;-;-;-;-;- + 1048 + 1 1.833 130614.6 1.0 4528 4573 9092 HBL1_DMSO_200M_050219_2,9103 HBL1_DMSO_200M_050219_2,9103,YYYPKQQGL True True YYYPKQQGL 49.449622 580.295336902142 2833101.75 9092.0 ENSG00000147133|ENST00000423759|TAF1;;nc|ENSG00000147133|P21675-18|TAF1;;nc|ENSG00000147133|P21675-21|TAF1;;nc|ENSG00000147133|P21675-1|TAF1;;nc|ENSG00000147133|P21675-19|TAF1;;nc|ENSG00000147133|P21675-17|TAF1;;nc|ENSG00000147133|P21675-16|TAF1;;nc|ENSG00000147133|P21675-25|TAF1;;nc|ENSG00000147133|P21675-23|TAF1;;nc|ENSG00000147133|P21675-15|TAF1;;nc|ENSG00000147133|P21675-13|TAF1;;nc|ENSG00000147133|P21675|TAF1;;nc|ENSG00000147133|P21675-22|TAF1;;nc|ENSG00000147133|P21675-20|TAF1;;nc|ENSG00000147133|P21675-24|TAF1 6.626927534739177 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9104 49.463 800.0 145470.0 25 0 11548.0 + 18398 KVVDVEEQQL 10 142 593.8192595919455 1185.623966250691 2 593.8187744021416 MULTI CID FTMS 0 0 0 9092 136086.03125 0.3169167455061494 3 -0.2940101623535156 12 Unmodified _KVVDVEEQQL_ ENSG00000012048|ENST00000357654|BRCA1;nc|ENSG00000012048|P38398-3|BRCA1;nc|ENSG00000012048|P38398-4|BRCA1;nc|ENSG00000012048|P38398-5|BRCA1;nc|ENSG00000012048|P38398-6|BRCA1;nc|ENSG00000012048|P38398-7|BRCA1;nc|ENSG00000012048|P38398-8|BRCA1 20.580933911654288 0.5022139299129796 4 EEQQ{I|L} 5 5 20.272 0.0 0.0 1.7098 0.0 0.0 540.3278460948935 0.0 540.3278460948935 0.0 0.964758805332341 0.0 0.0 0 0.4073871488943875 0.0 0.0 0.0 + EEQQ{I|L} 1.7098 + + 747 1 1.833 90577.0 0.9399999976158142 4529 4573 9092 HBL1_DMSO_200M_050219_2,9104 HBL1_DMSO_200M_050219_2,9104,KVVDVEEQQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9106 49.479 800.0 152320.0 25 0 18938.0 + -1 SFFERCMPCKY 11 126 742.314679475578 1482.614806017956 2 742.3163940310478 MULTI CID FTMS 0 0 0 9105 49418.9921875 0.4161467379784404 1 -0.0984916687011718 1 Carbamidomethyl (C),Oxidation (M) _SFFERCM(Oxidation (M))PC(Carbamidomethyl (C))KY_ REV__ENSG00000179195|ENST00000337815|ZNF664 13.042465956692816 0.7638483625850725 4 [WR]GN{M(Oxidation (M))|F}NQ[HD]{M(Oxidation (M))|F}Y 11 -1 + 47.171 0.0 0.0 3.1816 3.1816 72.163 0.0 0.0 0.0 4.981979378655872 7.367585652254185 4.981979378655872 6.548505738282607 0 0.0 0.0 0.0 0.7742275032520141 [WR]GN{M(Oxidation (M))|F}NQ[HD]{M(Oxidation (M))|F}Y;[WR]GNQQA[NP]C{M(Oxidation (M))|F}Y;[WR]GN{M(Oxidation (M))|F}NQQ{[DS]|[MA]|[CV]|TT}TM;[WR]GNQQA{[MS]|[{M(Oxidation (M))|F}A]}Y{[QD]|[EN]|[WG]|[KD]|[RS]};[WR]GGG{M(Oxidation (M))|F}NQ[HD]{M(Oxidation (M))|F}Y;[WR]GN{M(Oxidation (M))|F}GGQ[HD]{M(Oxidation (M))|F}Y;[WR]GN{M(Oxidation (M))|F}N[AG][HD]{M(Oxidation (M))|F}Y;[WR]GN{M(Oxidation (M))|F}N{[ES]|[DT]|[{I|L}C]}C(Carbamidomethyl (C))A{[QD]|[EN]|[WG]|[KD]|[RS]};[WR]GN{M(Oxidation (M))|F}N{[{M(Oxidation (M))|F}H]|[RQ]}Y{[QD]|[EN]|[WG]|[KD]|[RS]};[WR][C(Carbamidomethyl (C))S]ANQ[HD]{M(Oxidation (M))|F}Y 3.1816;2.7399;2.6847;2.5787;2.5659;2.5659;2.5659;2.4077;2.2925;2.2542 -;-;-;-;-;-;-;-;-;- 4009 + 1 1.833 90352.1 0.8399999737739563 4530 4574 9105 HBL1_DMSO_200M_050219_2,9106 HBL1_DMSO_200M_050219_2,9106,SFFERCMPCKY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9107 49.48 19.0 1929600.0 25 0 186330.0 40179 VGPNPEKKL 9 72 491.2910534921581 980.5675540511164 2 492.2979614138603 MULTI CID FTMS 0 0 0 9105 1289788.25 1.0 0 0.0 2 Unmodified _VGPNPEKKL_ ENST00000301624.8_1_17:76104411-76104549:+|nuORF 7.910154910731844 0.6385446671287552 4 V 1 8 14.604 0.0 0.0 1.4894 0.0 0.0 863.4878706788492 0.0 863.4878706788492 0.0 1.4165061435177488 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.4894 + + 42 + 1 1.833 37384.3 1.0 4531 4574 9105 HBL1_DMSO_200M_050219_2,9107 HBL1_DMSO_200M_050219_2,9107,VGPNPEKKL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9108 49.485 246.0 491600.0 25 0 63742.0 + 4055 DALVTKNL 8 107 437.25569610879097 872.496839284382 2 437.2555724978447 MULTI CID FTMS 0 0 0 9105 354238.78125 0.764871696064261 -1 0.0651092529296875 3 Unmodified _DALVTKNL_ ENSG00000105202|ENST00000221801|FBL;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 52.268347100219714 0.1285778651304833 4 {[DA]|[EG]}{I|L}VTKQV 8 2 + 68.67 0.0 0.0 7.8705 7.8705 83.611 0.0 0.0 0.0 19.75390988664909 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.9247425010840048 1.6989700043360187 0.3807196863200844 0.9731975075880328 {[DA]|[EG]}{I|L}VTKQV;{[DA]|[EG]}{I|L}VTKN{I|L};{[DA]|[EG]}{I|L}V[KQ]TV;{[DA]|[EG]}{I|L}VTK[AG]V;{[DA]|[EG]}{I|L}V[KQ]S{I|L};{[DA]|[EG]}{I|L}VTKGG{I|L} 7.8705;7.5254;6.5628;6.4946;6.2178;6.1496 -;+;-;-;-;- + 348 + 1 1.833 99503.0 1.0 4532 4574 9105 HBL1_DMSO_200M_050219_2,9108 HBL1_DMSO_200M_050219_2,9108,DALVTKNL False True DALVTKNL 49.485053 437.255572497845 3399128.25 9105.0 ENSG00000105202|ENST00000221801|FBL;;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 4.724622488021851 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9109 49.499 800.0 374720.0 25 0 35831.0 14144 IAYYAMGFDW 10 188 412.85103080939166 1235.531263028375 3 412.8511840701103 MULTI CID FTMS 0 0 0 9105 222180.09375 0.9388305742546644 -1 0.0651092529296875 4 Unmodified _IAYYAMGFDW_ ENSG00000169508|ENST00000376414|GPR183 13.614867670302877 0.6190977555336379 4 [R{M(Oxidation (M))|F}]YCYETRV 9 9 + 63.839 0.0 0.0 5.167 5.167 80.75 0.0 0.0 0.0 16.573544223622953 8.709053036205425 8.709053036205425 8.709053036205425 0 0.4247425010840047 2.0 0.7742275032520141 0.0 [R{M(Oxidation (M))|F}]YCYETRV;[R{M(Oxidation (M))|F}]YCYETVR;[R{M(Oxidation (M))|F}]YCYVG{[ET]|[MV]}V;[R{M(Oxidation (M))|F}]YCYEVTR;[R{M(Oxidation (M))|F}]YCVYG{[ET]|[MV]}V;[R{M(Oxidation (M))|F}]YCYV{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};[R{M(Oxidation (M))|F}]YCYV{[TV]|[{I|L}S]}W;[R{M(Oxidation (M))|F}]YCVY{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};[R{M(Oxidation (M))|F}]YCVY{[TV]|[{I|L}S]}W;[R{M(Oxidation (M))|F}]YCYVETR 5.167;4.4621;4.0954;3.8273;3.702;3.6754;3.6754;3.2819;3.2819;3.0549 -;-;-;-;-;-;-;-;-;- 973 + 1 1.833 231794.8 1.0 4533 4574 9105 HBL1_DMSO_200M_050219_2,9109 HBL1_DMSO_200M_050219_2,9109,IAYYAMGFDW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9110 49.505 366.0 414360.0 25 0 52967.0 + 7688 KVLRDNIQGI 10 142 386.2354983532434 0 386.2346679568291 PEAK CID FTMS 0 0 0 9105 206376.515625 1.0 0 0.0 5 Unmodified _EKQLQVISVL_ ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000158406|ENST00000377727|H4C8;ENSG00000275126|ENST00000618305|H4C13;ENSG00000273542|ENST00000611927|H4C12;ENSG00000197061|ENST00000377803|H4C3;ENSG00000276966|ENST00000615164|H4C5;ENSG00000278637|ENST00000617569|H4C1;ENSG00000270882|ENST00000578186|H4C14;ENSG00000197238|ENST00000355057|H4C11;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276180|ENST00000615353|H4C9;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16 10.898955630103616 0.3679943738271097 4 P 1 10 5.4846 0.0 0.0 0.71186 0.0 0.0 62.06268363176225 608.3187349908811 670.3814186226434 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.71186 - 33 + 1 1.833 123647.0 1.0 4534 4574 9105 HBL1_DMSO_200M_050219_2,9110 HBL1_DMSO_200M_050219_2,9110,EKQLQVISVL False False KVLRDNIQGI 49.505455 386.234667956829 2880383.0 9105.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 1.916166067123413 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9111 49.519 800.0 401190.0 25 0 24858.0 + 23665 LTRSGRARLL 10 211 381.57414887223314 1141.7006172168994 3 381.5742370486259 MULTI CID FTMS 0 0 0 9105 198261.21875 1.0 0 0.0 6 Unmodified _LTRSGRARLL_ REV__ENST00000606441.1_1_6:3068414-3068654:-|nuORF 9.38312468134398 0.6832340498775793 4 {M(Oxidation (M))|F}PQK{I|L}KR{I|L}{I|L} 9 -1 + 38.456 0.0 0.0 3.3683 3.3683 75.812 0.0 0.0 0.0 20.551311393259883 0.7159796350266348 0.7159796350266348 9.208187539523747 0 0.0 0.0 0.0 0.5 {M(Oxidation (M))|F}PQK{I|L}KR{I|L}{I|L};{M(Oxidation (M))|F}P[AG]K{I|L}KR{I|L}{I|L};[PG]A{M(Oxidation (M))|F}K{I|L}KR{I|L}{I|L} 3.3683;2.5618;1.0345 -;-;- 200 + 1 1.833 247838.3 0.8899999856948853 4535 4574 9105 HBL1_DMSO_200M_050219_2,9111 HBL1_DMSO_200M_050219_2,9111,LTRSGRARLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9112 49.533 800.0 241110.0 25 0 20798.0 + 11044 GDAPRALLA 9 208 442.2533724941508 0 442.2535278201103 PEAK CID FTMS 0 0 0 9105 162132.984375 1.0 0 0.0 7 Unmodified _GDAPRALLA_ ENSG00000156860|ENST00000356166|FBRS 41.95555342248728 0.0536712386667488 4 {I|L}{I|L}A 3 6 15.846 0.0 0.0 1.7956 0.0 0.0 89.04707594357667 493.2170504205688 582.2641263641455 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {I|L}{I|L}A 1.7956 + + 107 + 1 1.833 150163.5 0.9200000166893004 4536 4574 9105 HBL1_DMSO_200M_050219_2,9112 HBL1_DMSO_200M_050219_2,9112,GDAPRALLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9113 49.548 800.0 176050.0 25 0 14638.0 + -1 CCRRGMWRWCC 11 100 844.3365121188364 1686.6584713044726 2 844.3378784060478 MULTI CID FTMS 0 0 0 9105 161529.765625 1.0 0 0.0 8 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))RRGMWRWC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ REV__ENST00000574539.5_1_17:7534071-7534581:+|nuORF 0.0 0.8751479354844584 4 {NN|[MP]|[D{I|L}]|[EV]}GN{I|L}NT 7 -1 34.87 0.0 0.0 2.0674 0.0 0.0 0.0 956.2835683105852 956.2835683105852 -0.3813217919600831 0.0 -0.3813217919600831 0.0 0 0.0 0.8860566476931632 0.7346368802282017 0.5994850021680094 {NN|[MP]|[D{I|L}]|[EV]}GN{I|L}NT 2.0674 - 1484 1 1.833 98788.4 0.8799999952316284 4537 4574 9105 HBL1_DMSO_200M_050219_2,9113 HBL1_DMSO_200M_050219_2,9113,CCRRGMWRWCC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9114 49.562 800.0 136090.0 25 0 26940.0 -1 0 59 956.9407115182664 1911.8668701033323 2 956.9401122927666 MULTI CID FTMS 0 0 0 9105 153464.828125 1.0 0 0.0 9 4 VE 2 -1 12.251 0.0 0.0 0.64076 0.0 0.0 1081.5621883920476 599.1751803033811 1680.7373686954288 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 VE 0.64076 - 48 + 1 1.833 78067.0 0.8600000143051147 4538 4574 9105 HBL1_DMSO_200M_050219_2,9114 HBL1_DMSO_200M_050219_2,9114, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9116 49.566 11.0 3906700.0 25 0 510180.0 + 41945 VQIEEVRQV 9 59 550.3087736714515 1098.602994409703 2 550.3090087771416 MULTI CID FTMS 0 0 0 9115 4845918.5 0.8741331690142179 1 -0.1304092407226562 1 Unmodified _VQIEEVRQV_ ENSG00000143621|ENST00000361891|ILF2 24.99096001346401 0.2132109383330889 4 {I|L}EEV 4 5 26.938 0.0 0.0 2.452 0.0 0.0 227.124839062489 398.2172335260376 625.3420725885265 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}EEV 2.452 + + 15 + 1 1.815 45766.5 1.0 4539 4575 9115 HBL1_DMSO_200M_050219_2,9116 HBL1_DMSO_200M_050219_2,9116,VQIEEVRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9117 49.568 85.0 638000.0 25 0 91072.0 + 18483 KYLTSNVAY 9 76 529.7801250803043 1057.5456972274085 2 529.7802612185478 MULTI CID FTMS 0 0 0 9115 921133.125 0.7135366754519308 1 -0.1304092407226562 2 Unmodified _KYLTSNVAY_ ENSG00000120137|ENST00000239231|PANK3;ENSG00000125779|ENST00000610179|PANK2;ENST00000495692.5_1_20:3869620-3891228:+|nuORF;nc|ENSG00000125779|Q9BZ23-3|PANK2;nc|ENSG00000125779|Q9BZ23|PANK2;PANK2|p.P376Tfs*3|1|0.41|ENSG00000125779|chr20:3910719-3910720|-/A|frameshift_variant 49.93300154707207 0.0405168250806675 4 T[NS]VAY 6 3 47.822 0.0 0.0 4.522 0.0 0.0 404.2432728498063 0.0 404.2432728498063 0.0 37.54386962153752 0.0 0.0 0 1.0 0.0 1.0356668758921828 0.75 + T[NS]VAY 4.522 + + 147 1 1.815 47442.0 1.0 4540 4575 9115 HBL1_DMSO_200M_050219_2,9117 HBL1_DMSO_200M_050219_2,9117,KYLTSNVAY True True KYLTSNVAY 49.568103 529.780261218548 18890314.0 9115.0 nc|ENSG00000125779|Q9BZ23-3|PANK2;;PANK2|p.P376Tfs*3|1|0.41|ENSG00000125779|chr20:3910719-3910720|-/A|frameshift_variant;;ENSG00000125779|ENST00000610179|PANK2;;ENSG00000120137|ENST00000239231|PANK3;;ENST00000495692.5_1_20:3869620-3891228:+|nuORF;;nc|ENSG00000125779|Q9BZ23|PANK2 7.082993666330974 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9118 49.571 121.0 736910.0 25 0 55014.0 + -1 KATLPVTKM 9 124 502.7941434654232 1003.5737339976464 2 502.7940856814384 MULTI CID FTMS 0 0 0 9115 452522.9375 1.0 0 0.0 3 Oxidation (M) _KATLPVTKM(Oxidation (M))_ REV__ENSG00000143970|ENST00000435504|ASXL2 16.149105407346934 0.3995459350917656 4 T{M(Oxidation (M))|F}K 3 -1 34.341 0.0 0.0 3.4219 0.0 0.0 609.3860793863112 0.0 609.3860793863112 0.0 9.08748409920328 0.0 0.0 0 0.9916440611282626 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.4219 - 450 1 1.815 70775.8 1.0 4541 4575 9115 HBL1_DMSO_200M_050219_2,9118 HBL1_DMSO_200M_050219_2,9118,KATLPVTKM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9119 49.573 130.0 521610.0 25 0 117210.0 + 17407 KMPEINAKV 9 86 515.2906429723337 1028.5667330114672 2 515.2916747927666 MULTI CID FTMS 0 0 0 9115 440943.84375 0.4390336358400621 2 -0.20965576171875 4 Unmodified _KMPEINAKV_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;ENST00000569569.5_1_16:56966069-56970730:+|nuORF;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1 14.95716135407024 0.4318104563536712 4 K[{M(Oxidation (M))|F}T]KA{[HG]|PP}MG 9 7 35.379 0.0 0.0 3.4397 0.0 0.0 0.0 68.05150018863515 68.05150018863515 23.785306149852097 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 K[{M(Oxidation (M))|F}T]KA{[HG]|PP}MG 3.4397 - 366 + 1 1.815 60484.4 1.0 4542 4575 9115 HBL1_DMSO_200M_050219_2,9119 HBL1_DMSO_200M_050219_2,9119,KMPEINAKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9120 49.583 541.0 218780.0 25 0 12604.0 -1 VKMTCDLCTV 10 121 613.7820535490458 1225.5495541648916 2 613.7831298708916 MULTI CID FTMS 0 0 0 9115 376845.90625 0.4941291612390897 3 -0.3514404296875 5 2 Carbamidomethyl (C) _VKMTC(Carbamidomethyl (C))DLC(Carbamidomethyl (C))TV_ ENST00000296642.4_1_5:114572118-114573561:-|nuORF 13.90604991867851 0.6142120002215601 4 [VG]KDMVGV 8 -1 56.195 0.0 0.0 4.5853 0.0 0.0 0.0 437.1147449570478 437.1147449570478 29.428571858695136 0.0 0.0 0.0 0 0.5 2.0 1.110924374808178 0.3252574989159953 [VG]KDMVGV 4.5853 - 2628 1 1.815 90084.4 1.0 4543 4575 9115 HBL1_DMSO_200M_050219_2,9120 HBL1_DMSO_200M_050219_2,9120,VKMTCDLCTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9121 49.593 607.0 280360.0 25 0 35119.0 + 15676 IQPSSFRSV 9 168 510.7777714765455 1019.540990019891 2 510.7771789431572 MULTI CID FTMS 0 0 0 9115 303753.53125 1.0 0 0.0 6 Unmodified _IQPSSFRSV_ ENSG00000171763|ENST00000305560|SPATA5L1;nc|ENSG00000171763|Q9BVQ7-2|AFG2B 47.594388314883695 0.0456443387682827 4 {I|L}QPSS{M(Oxidation (M))|F}RSV 9 0 + 64.484 0.0 0.0 6.3249 6.3249 85.4 0.0 0.0 0.0 16.039872431586502 8.553099982273892 8.553099982273892 8.553099982273892 0 0.805462187404089 0.7958800173440752 0.8252574989159953 1.1549471895720984 + + {I|L}QPSS{M(Oxidation (M))|F}RSV;{I|L}QVN{I|L}{[WT]|[RM]}{M(Oxidation (M))|F};{I|L}QPSS[YR]AV;{I|L}QVN{I|L}{[TV]|[{I|L}S]}S{M(Oxidation (M))|F};{I|L}QPSS[YR]G{I|L};GA{I|L}PSS{M(Oxidation (M))|F}RSV;{I|L}[AG]PSS{M(Oxidation (M))|F}RSV;{I|L}QVN{I|L}{[MS]|[{M(Oxidation (M))|F}A]}C{I|L};{I|L}QV[DG]{M(Oxidation (M))|F}RSV;{I|L}QP[NG]{I|L}{I|L}EH 6.3249;5.4859;5.1932;5.1854;5.15;4.7516;4.6411;4.576;4.4261;4.2538 +;-;-;-;-;-;-;-;-;- + 1694 + 1 1.815 134733.3 1.0 4544 4575 9115 HBL1_DMSO_200M_050219_2,9121 HBL1_DMSO_200M_050219_2,9121,IQPSSFRSV True True IQPSSFRSV 49.593411 510.777178943157 2940072.5 9115.0 nc|ENSG00000171763|Q9BVQ7-2|AFG2B;;ENSG00000171763|ENST00000305560|SPATA5L1 7.458264032999675 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9122 49.605 681.0 369180.0 25 0 23324.0 + 22190 LPQEIQSRV 9 222 535.3037633141528 1068.5929736951057 2 535.3055908083916 MULTI CID FTMS 0 0 0 9115 215248.875 0.4397869014456537 -4 0.3021736145019531 7 Unmodified _LPQEIQSRV_ ENSG00000006194|ENST00000219069|ZNF263 40.23920728925047 0.0741434193262949 4 {I|L}PQE{I|L}[RN]TV 9 3 + 67.708 0.0 0.0 6.3362 6.3362 76.953 0.0 0.0 0.0 35.524239832220125 1.5177045842644643 1.5177045842644643 1.9188552623891293 0 0.9731975075880328 1.3010299956639813 0.6382104921644451 0.3054621874040891 {I|L}PQE{I|L}[RN]TV;{I|L}PQE{I|L}[RN]S{I|L};{I|L}PQVY{I|L}HTV;{I|L}PQVY{I|L}HS{I|L};{I|L}P[HA]VYEK{I|L};{I|L}P[AG]E{I|L}[RN]TV;{I|L}PQE{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L};{I|L}PQVN[W{I|L}]TV;{I|L}PV[HA]YEK{I|L};{I|L}P[AG]E{I|L}[RN]S{I|L} 6.3362;6.1567;5.7702;5.5906;5.5385;5.4745;5.4211;5.3765;5.311;5.2949 -;-;-;-;-;-;-;-;-;- 3477 + 1 1.815 194183.0 1.0 4545 4575 9115 HBL1_DMSO_200M_050219_2,9122 HBL1_DMSO_200M_050219_2,9122,LPQEIQSRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9123 49.618 723.0 280860.0 25 0 40032.0 + 7713 ELDASDIYKI 10 122 583.8000999452494 1165.5856469572986 2 583.7995483279228 MULTI CID FTMS 0 0 0 9115 191023.0625 0.1633985904296126 -2 0.1636009216308593 8 Unmodified _ELDASDIYKI_ REV__ENSG00000171793|ENST00000650070|CTPS1;REV__ENST00000463285.5_1_1:41461708-41469783:+|nuORF;REV__nc|ENSG00000171793|P17812-2|CTPS1 24.020572477871973 0.4289996903560794 4 {I|L}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HS]V{I|L}K 9 -1 39.109 0.0 0.0 3.3553 0.0 0.0 97.97437563565866 0.0 97.97437563565866 0.0 5.859999882900063 0.0 0.0 0 0.8494850021680094 0.0 1.305462187404089 0.8897727294836956 {I|L}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HS]V{I|L}K 3.3553 - 526 + 1 1.815 154804.6 1.0 4546 4575 9115 HBL1_DMSO_200M_050219_2,9123 HBL1_DMSO_200M_050219_2,9123,ELDASDIYKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9124 49.623 258.0 274450.0 25 0 30726.0 + 24571 MLGETSMSKPR 11 70 618.808635464397 1235.6027179955938 2 618.8085815310478 MULTI CID FTMS 0 0 0 9115 189720.875 0.9178337129503056 1 -0.1304092407226562 9 Unmodified _MLGETSMSKPR_ REV__ENSG00000062485|ENST00000351328|CS 4.897010918128616 0.8520435188433833 4 S 1 -1 10.797 0.0 0.0 0.87382 0.0 0.0 617.3278899700064 528.2223604791624 1145.5502504491687 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 S 0.87382 + + 43 + 1 1.815 57687.5 1.0 4547 4575 9115 HBL1_DMSO_200M_050219_2,9124 HBL1_DMSO_200M_050219_2,9124,MLGETSMSKPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9125 49.635 731.0 286800.0 25 0 28411.0 37274 TIPERGTIGV 10 180 521.7981358569532 0 521.7968627810478 PEAK CID FTMS 0 0 0 9115 189188.765625 1.0 0 0.0 10 Unmodified _TIPERGTIGV_ ENST00000412391.6_2_19:36233501-36235273:-|nuORF;ENST00000587987.5_1_19:36233501-36235544:-|nuORF;ENST00000590135.5_1_19:36233501-36233795:-|nuORF;ENST00000591084.5_3_19:36233501-36234996:-|nuORF;ENST00000592913.5_1_19:36233501-36235052:-|nuORF;nc|ENSG00000161265|Q8WU68-2|U2AF1L4 24.99096001346401 0.2580721372233971 4 VG{I|L}{[QN]|[E{I|L}]|[KN]}Y 6 8 13.02 0.0 0.0 1.2501 0.0 0.0 232.1429018563128 132.04595361881096 364.1888554751238 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VG{I|L}{[QN]|[E{I|L}]|[KN]}Y 1.2501 - 499 + 1 1.815 165202.6 1.0 4548 4575 9115 HBL1_DMSO_200M_050219_2,9125 HBL1_DMSO_200M_050219_2,9125,TIPERGTIGV False True YYVNRDTL 49.635323 521.796862781048 4942191.0 9115.0 ENSG00000135372|ENST00000257829|NAT10;;nc|ENSG00000135372|Q9H0A0-2|NAT10 0.8585235377152761 2.0 False 8.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 9126 49.65 754.0 293680.0 25 0 23469.0 + 8851 EYVSSQLGRP 10 174 568.2916417130684 1134.5687304929368 2 568.2919799685478 MULTI CID FTMS 0 0 0 9115 168716.65625 0.8244756710993029 5 -0.4434356689453125 11 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 17.11289562659939 0.5604042439455784 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG{I|L}RP 10 -1 + 54.529 0.0 0.0 4.8062 4.8062 75.897 0.0 0.0 0.0 7.269987279362624 5.118833609788744 5.118833609788744 5.118833609788744 0 0.0 0.0 0.9559771852360796 0.2396518287104437 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG{I|L}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG{I|L}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STGGG{I|L}RP;[YV]ESTNG{I|L}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STGGG{I|L}PR;[YV]ESTNG{I|L}PR;[YV]ESTGGG{I|L}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STN[RP]AV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}T{I|L}HAV;[YV]{M(Oxidation (M))|F}GET{I|L}HAV 4.8062;4.355;3.9984;3.9034;3.5472;3.4523;3.0957;2.9829;2.9779;2.857 -;-;-;-;-;-;-;-;-;- 4316 + 1 1.815 163715.7 1.0 4549 4575 9115 HBL1_DMSO_200M_050219_2,9126 HBL1_DMSO_200M_050219_2,9126,EYVSSQLGRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9127 49.663 800.0 118190.0 25 0 14373.0 28962 QDITHFFQQIQ 11 119 702.8464171926021 1403.678281452004 2 702.8459350466728 MULTI CID FTMS 0 0 0 9115 148537.921875 0.580083219225728 2 -0.20965576171875 12 Unmodified _QDITHFFQQIQ_ ENSG00000127603|ENST00000564288|MACF1;ENST00000476350.1_1_1:39768622-39838291:+|nuORF;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1 43.9818466556824 0.1510575460884947 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}T{M(Oxidation (M))|F}N[HT]G{M(Oxidation (M))|F}{I|L}Q 12 7 + 69.502 0.0 0.0 4.9514 4.9514 75.497 0.0 0.0 0.0 16.132065236078063 4.341827155103559 4.341827155103559 4.341827155103559 0 0.8807196863200843 2.0 0.3494850021680094 0.5418727718234408 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}T{M(Oxidation (M))|F}N[HT]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}T{M(Oxidation (M))|F}{I|L}[MT]E[WH];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}T{M(Oxidation (M))|F}{I|L}[EC]E[WH];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}T{M(Oxidation (M))|F}HHAE[WH];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[HQ]QAE[WH];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}T{M(Oxidation (M))|F}GG[HT]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[DP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}ET{I|L}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}E[WH];{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[HQ]QAE[WH];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}ET{I|L}{[{M(Oxidation (M))|F}C]|[YS]}E[WH] 4.9514;4.6421;4.6421;4.4104;4.3759;4.3033;4.2935;4.11;4.036;3.9642 -;-;-;-;-;-;-;-;-;- 2619 1 1.815 69715.1 0.8700000047683716 4550 4575 9115 HBL1_DMSO_200M_050219_2,9127 HBL1_DMSO_200M_050219_2,9127,QDITHFFQQIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9128 49.677 800.0 72103.0 25 0 11023.0 8653 EVEWLKNEDVI 11 109 687.3503906130791 0 687.3503906130791 PEAK CID FTMS 0 0 0 -1 0 13 Unmodified _EVEWLKNEDVI_ ENSG00000107731|ENST00000335350|UNC5B;nc|ENSG00000107731|Q8IZJ1-2|UNC5B 8.745405648335112 0.4618489994582195 4 M 1 11 3.4949 0.0 0.0 0.2546 0.0 0.0 686.3817457418648 552.2446993463499 1238.6264450882147 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.2546 - 45 + 1 1.815 47365.5 0.8600000143051147 4551 4575 9115 HBL1_DMSO_200M_050219_2,9128 HBL1_DMSO_200M_050219_2,9128,EVEWLKNEDVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9129 49.692 800.0 250890.0 25 0 11267.0 + 30634 RFMPRTTQL 9 192 383.87790373287055 1148.6118817988115 3 383.8775512576103 MULTI CID FTMS 0 0 0 9115 113790.453125 1.0 0 0.0 14 Unmodified _RFMPRTTQL_ ENSG00000127993|ENST00000265732|RBM48;nc|ENSG00000127993|Q5RL73-2|RBM48 20.580933911654288 0.2795815587326093 4 {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F} 3 7 23.314 0.0 0.0 2.0298 0.0 0.0 0.0 780.4441321252367 780.4441321252367 2.121573900402417 0.0 0.0 0.0 0 0.0 2.0 0.086696871556164 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F} 2.0298 - 515 1 1.815 163087.5 0.6499999761581421 4552 4575 9115 HBL1_DMSO_200M_050219_2,9129 HBL1_DMSO_200M_050219_2,9129,RFMPRTTQL False True RFMPRTTQL 49.692208 383.87755125761 972631.125 9115.0 nc|ENSG00000127993|Q5RL73-2|RBM48;;ENSG00000127993|ENST00000265732|RBM48 0.2597728768984477 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9131 49.697 3.6 7718100.0 25 0 933360.0 + 17000 KIYEGQVEV 9 52 532.7848608794221 1063.5551688256442 2 532.7852661013603 MULTI CID FTMS 0 0 0 9130 11487957.0 0.1860532395410738 3 -0.2741928100585937 1 Unmodified _KIYEGQVEV_ ENSG00000122406|ENST00000370321|RPL5;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 18.1463463914782 0.3454829746528889 4 VQCEV 5 6 41.938 0.0 0.0 3.9432 0.0 0.0 487.2995058391192 0.0 487.2995058391192 0.0 30.51152522447381 0.0 0.0 0 0.5 0.0 0.5 0.0 VQCEV 3.9432 - 78 + 1 1.809 31303.2 1.0 4553 4576 9130 HBL1_DMSO_200M_050219_2,9131 HBL1_DMSO_200M_050219_2,9131,KIYEGQVEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9132 49.698 13.0 3159900.0 25 0 189580.0 + 21133 LPAPPTQNM 9 83 484.7471199658434 967.4796869984868 2 484.7473022341728 MULTI CID FTMS 0 0 0 9130 4177313.75 1.0 0 0.0 2 Unmodified _LPAPPTQNM_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 57.47134341890925 0.0274820932774257 4 [{I|L}P]APPTQNM 9 0 + 51.85 0.0 0.0 5.3592 5.3592 77.3 0.0 0.0 0.0 12.710667722865374 3.9203653217685286 3.9203653217685286 4.387116332977712 0 1.1989700043360187 1.5228787452803376 0.5 0.0 + + [{I|L}P]APPTQNM;[{I|L}P]PAPTQNM;[{I|L}P]APPT[AG]NM;[PA]{I|L}PPTQNM;[{I|L}P]PAPT[AG]NM;[PA]{I|L}PPT[AG]NM;[{I|L}P]AP{[SA]|[TG]}[PA]NM;[{I|L}P]PA{[SA]|[TG]}[PA]NM;[{I|L}P]P[QT][PA]NM;[PA]{I|L}P{[SA]|[TG]}[PA]NM 5.3592;4.9058;4.4075;4.0455;3.954;3.0937;2.3456;1.8921;1.2169;1.0318 +;-;-;-;-;-;-;-;-;- + 198 1 1.809 37010.7 1.0 4554 4576 9130 HBL1_DMSO_200M_050219_2,9132 HBL1_DMSO_200M_050219_2,9132,LPAPPTQNM True True LPAPPTQNM 49.697772 484.747302234173 242410496.0 9130.0 ENSG00000184402|ENST00000331758|SS18L1;;ENSG00000141380|ENST00000415083|SS18;;nc|ENSG00000184402|O75177-5|SS18L1;;nc|ENSG00000184402|O75177-2|SS18L1;;nc|ENSG00000141380|Q15532-2|SS18 7.091816425323486 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9133 49.699 13.0 3483700.0 25 0 549220.0 + 22026 LPPPPPPAM 9 63 458.751710776598 915.488868619996 2 458.7518188357353 MULTI CID FTMS 0 0 0 9130 3803510.5 0.8599629833703266 -4 0.346221923828125 3 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 79.93452657146344 0.0175326119056068 4 [{I|L}P]PPPP 6 3 52.484 0.0 0.0 5.7329 0.0 0.0 0.0 314.118010340539 314.118010340539 23.935078169319297 0.0 0.0 0.0 0 1.610924374808178 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.7329 + + 281 1 1.809 43837.6 1.0 4555 4576 9130 HBL1_DMSO_200M_050219_2,9133 HBL1_DMSO_200M_050219_2,9133,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9134 49.7 29.0 2379500.0 25 0 137050.0 + 21478 LPHPGLKV 8 81 430.7713277632493 859.5281025932986 2 430.7713195681572 MULTI CID FTMS 0 0 0 9130 2019426.625 0.7428493325792376 -2 0.2289009094238281 4 Unmodified _LPHPGLKV_ ENSG00000119787|ENST00000378954|ATL2;ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2;nc|ENSG00000198513|Q8WXF7-2|ATL1 67.03532852164291 0.116292309877964 4 {I|L}PHPG{I|L}KV 8 0 + 62.648 0.0 0.0 7.2886 7.2886 79.152 0.0 0.0 0.0 48.03879267796914 5.338096733120281 5.338096733120281 1.4608280609188284 0 1.3812033112643842 1.5228787452803376 0.0 0.3252574989159953 + + {I|L}PHPG{I|L}KV;{I|L}PHV[PA]KV;{I|L}PVH[PA]KV;{I|L}P[PG]H{I|L}KV;{I|L}VPH[PA]KV;{I|L}[{I|L}T]{[WT]|[RM]}KV;{I|L}[{I|L}T]K{[WT]|[RM]}V 7.2886;7.1187;5.3454;4.4972;2.8875;1.6192;1.2126 +;-;-;-;-;-;- + 281 + 1 1.809 63577.0 1.0 4556 4576 9130 HBL1_DMSO_200M_050219_2,9134 HBL1_DMSO_200M_050219_2,9134,LPHPGLKV True True LPHPGLKV 49.700129 430.771319568157 65416044.0 9130.0 nc|ENSG00000119787|Q8NHH9-2|ATL2;;ENSG00000119787|ENST00000378954|ATL2;;ENSG00000198513|ENST00000358385|ATL1;;nc|ENSG00000119787|Q8NHH9-5|ATL2;;nc|ENSG00000198513|Q8WXF7-2|ATL1;;nc|ENSG00000119787|Q8NHH9-3|ATL2;;nc|ENSG00000119787|Q8NHH9-4|ATL2 6.316091060638428 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9135 49.701 29.0 1852100.0 25 0 295570.0 + 32351 RYPDSILEH 9 58 565.2850900641672 1128.5556271951343 2 565.2857543826103 MULTI CID FTMS 0 0 0 9130 1824118.625 0.2853233630460668 4 -0.3130264282226562 5 Unmodified _RYPDSILEH_ ENSG00000104738|ENST00000649973|MCM4 34.93206674587334 0.1032771302489716 4 S{I|L}{I|L}EH 5 4 56.013 0.0 0.0 4.9633 0.0 0.0 531.2442765405979 0.0 531.2442765405979 0.0 45.04432191740108 0.0 0.0 0 1.805462187404089 0.0 0.0 0.0 + S{I|L}{I|L}EH 4.9633 + + 38 1 1.809 49141.8 1.0 4557 4576 9130 HBL1_DMSO_200M_050219_2,9135 HBL1_DMSO_200M_050219_2,9135,RYPDSILEH True True RYPDSILEH 49.701308 565.28575438261 199120121.0 9130.0 ENSG00000104738|ENST00000649973|MCM4 8.37892977396647 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9136 49.702 29.0 2077600.0 25 0 493560.0 + 35903 SVMYKLATT 9 69 507.2705188374884 1012.5264847417768 2 507.2707397341728 MULTI CID FTMS 0 0 0 9130 1754321.0 0.0849471303292149 -2 0.2289009094238281 6 Unmodified _SVMYKLATT_ REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8;REV__nc|ENSG00000189195|Q5XKL5|BTBD8 14.838274106304384 0.4350285940865338 4 [VS]YMATT{I|L}K 9 -1 + 79.108 0.0 0.0 7.8129 7.8129 95.775 0.0 0.0 0.0 63.42145952513228 10.959924024478129 10.959924024478129 26.57644705515452 0 0.8494850021680094 2.0 0.7302046884880937 0.0 [VS]YMATT{I|L}K;[VS]Y[VG]{M(Oxidation (M))|F}T{I|L}K 7.8129;5.1881 -;- 103 + 1 1.809 54145.8 1.0 4558 4576 9130 HBL1_DMSO_200M_050219_2,9136 HBL1_DMSO_200M_050219_2,9136,SVMYKLATT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9137 49.704 65.0 781960.0 25 0 45025.0 9759 FMPSPTFSEL 10 75 578.2738471600309 1154.5331413868616 2 578.2741577029228 MULTI CID FTMS 0 0 0 9130 1038642.6875 0.6828587618351815 -1 0.1304092407226562 7 Unmodified _FMPSPTFSEL_ ENSG00000198300|ENST00000326441|PEG3;nc|ENSG00000198300|Q9GZU2-2|PEG3;nc|ENSG00000198300|Q9GZU2-4|PEG3;PEG3|p.Y1315*|1|0.21|ENSG00000198300|chr19:56814497-56814497|A/-|frameshift_variant 30.63653989081413 0.2803493085145199 4 [DN]ESVG[RH]E{I|L} 10 7 + 52.413 0.0 0.0 4.5398 4.5398 80.678 0.0 0.0 0.0 33.11629054940951 15.026975159433526 15.026975159433526 9.542425094393252 0 0.4247425010840047 0.0 1.2302046884880935 0.0 [DN]ESVG[RH]E{I|L};[DN]EDK[RH]E{I|L};[DN]WW[RH]E{I|L};[PA]Q{[VA]|[{I|L}G]}SG{[YC]|[HE]}{M(Oxidation (M))|F}{I|L};[PA]E[KQ]G{[YC]|[HE]}{M(Oxidation (M))|F}{I|L};[PA]Q[WK]{[YC]|[HE]}{M(Oxidation (M))|F}{I|L};[VP][RN]SG[PA]E[DN] 4.5398;3.7132;2.0949;1.5403;1.3397;0.92644;0.23557 -;-;-;-;-;-;- 268 + 1 1.809 45450.6 1.0 4559 4576 9130 HBL1_DMSO_200M_050219_2,9137 HBL1_DMSO_200M_050219_2,9137,FMPSPTFSEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9138 49.706 101.0 557870.0 25 0 68057.0 -1 LPPPPPPAM 9 86 466.7492067760757 931.4838606189514 2 466.7491332888603 MULTI CID FTMS 0 0 0 9130 676236.9375 0.9695981206997336 1 -0.0792465209960937 8 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP[WE] 8 -1 + 40.328 0.0 0.0 4.3294 4.3294 81.375 0.0 0.0 0.0 4.621440527729419 9.23516269895728 4.621440527729419 13.539171939081168 0 1.3494850021680094 1.6989700043360187 0.0 0.0 [{I|L}P]PPPP[WE];{[HG]|PP}APPPP{I|L}{M(Oxidation (M))|F};{[HG]|PP}PAPPP{I|L}{M(Oxidation (M))|F};[{I|L}P][YK]P[WE];[YK]APPP{I|L}{M(Oxidation (M))|F};{[HG]|PP}{I|L}PPP[WE];{[HG]|PP}P{I|L}PP[WE];[YK]{I|L}PP[WE];{[HG]|PP}PPAPP{I|L}{M(Oxidation (M))|F};[YK]PAPP{I|L}{M(Oxidation (M))|F} 4.3294;2.8759;2.719;2.6773;2.6699;2.3713;2.2144;2.1727;2.0727;2.0235 -;-;-;-;-;-;-;-;-;- 393 1 1.809 49899.8 1.0 4560 4576 9130 HBL1_DMSO_200M_050219_2,9138 HBL1_DMSO_200M_050219_2,9138,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9139 49.707 43.0 914350.0 25 0 91847.0 + 45525 YTTDRVMTV 9 84 543.2701967864405 1084.5258406396808 2 543.2687866091728 MULTI CID FTMS 0 0 0 9130 615518.0 0.2306599360654088 2 -0.2210311889648437 9 Unmodified _YTTDRVMTV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000523334.1_1_6:114270238-114277280:-|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 18.373094154950223 0.3393451798331396 4 YTTD 4 5 50.477 0.0 0.0 4.6543 0.0 0.0 0.0 601.3135470025999 601.3135470025999 36.9825221775622 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 + YTTD 4.6543 + + 40 + 1 1.809 35278.8 1.0 4561 4576 9130 HBL1_DMSO_200M_050219_2,9139 HBL1_DMSO_200M_050219_2,9139,YTTDRVMTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9140 49.711 182.0 344710.0 25 0 36646.0 + 35604 STYDETLHVA 10 99 568.2671190621891 1134.519685191178 2 568.2667724490166 MULTI CID FTMS 0 0 0 9130 391872.59375 1.0 0 0.0 10 Unmodified _STYDETLHVA_ ENSG00000112984|ENST00000394894|KIF20A;nc|ENSG00000112984|O95235-2|KIF20A 46.020951573049366 0.1035046897853725 4 {[MG]|[TS]}YDET{I|L}H{[VA]|[{I|L}G]} 10 0 + 40.468 0.0 0.0 3.5669 3.5669 79.313 0.0 0.0 0.0 22.08597403982388 2.498774732165998 2.498774732165998 15.740312677277188 0 0.3807196863200844 0.0 0.3807196863200844 0.0 + + {[MG]|[TS]}YDET{I|L}H{[VA]|[{I|L}G]};{[MG]|[TS]}YD{[MS]|[{M(Oxidation (M))|F}A]}V[HV]P;[HV]{I|L}T{[MS]|[{M(Oxidation (M))|F}A]}D[W{M(Oxidation (M))|F}];{[MG]|[TS]}Y[W{M(Oxidation (M))|F}]V[HV]P;[H{I|L}]TEDYV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[H{I|L}]TEDVY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[HV]{I|L}T[W{M(Oxidation (M))|F}][W{M(Oxidation (M))|F}];{[MG]|[TS]}Y[R{M(Oxidation (M))|F}]E[HV]P;[H{I|L}]TV{[MS]|[{M(Oxidation (M))|F}A]}D[W{M(Oxidation (M))|F}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}T{I|L}H{[VA]|[{I|L}G]} 3.5669;2.1796;2.1046;1.2682;1.2244;1.2244;1.198;1.0727;1.054;0.97772 +;-;-;-;-;-;-;-;-;- + 343 + 1 1.809 54655.3 1.0 4562 4576 9130 HBL1_DMSO_200M_050219_2,9140 HBL1_DMSO_200M_050219_2,9140,STYDETLHVA True True STYDETLHVA 49.710966 568.266772449017 5794094.0 9130.0 nc|ENSG00000112984|O95235-2|KIF20A;;ENSG00000112984|ENST00000394894|KIF20A 6.95238733291626 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9141 49.713 120.0 493870.0 25 0 60045.0 + 4598 DAYTHPQF 8 89 489.7197195403264 977.4248861474528 2 489.7197143435478 MULTI CID FTMS 0 0 0 9130 387864.9375 0.3688163125874817 3 -0.2741928100585937 11 Unmodified _DAYTHPQF_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 26.88365393820708 0.4786498634179528 4 {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F} 8 0 + 37.522 0.0 0.0 3.8389 3.8389 74.145 0.0 0.0 0.0 23.54303111733195 6.580306233405295 6.580306233405295 6.699243915188188 0 0.3252574989159953 1.6989700043360187 0.0 0.7614393726401688 + + {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F};{[DA]|[EG]}Y[HT][VG]C{I|L};{[DA]|[EG]}Y[HT]{[WS]|[C(Carbamidomethyl (C)){I|L}]}V 3.8389;3.1535;2.7519 +;-;- + 118 + 1 1.809 49523.6 1.0 4563 4576 9130 HBL1_DMSO_200M_050219_2,9141 HBL1_DMSO_200M_050219_2,9141,DAYTHPQF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9142 49.716 135.0 749640.0 25 0 46515.0 + -1 HPTTMSVLC 9 126 502.7291644123043 1003.4437758914088 2 502.7296630740166 MULTI CID FTMS 0 0 0 9130 352404.40625 0.5778981819762059 4 -0.3130264282226562 12 Oxidation (M) _HPTTM(Oxidation (M))SVLC_ REV__ENSG00000163625|ENST00000295888|WDFY3;REV__nc|ENSG00000163625|Q8IZQ1-2|WDFY3 36.04419817259434 0.0971720506436186 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM 8 -1 + 46.734 0.0 0.0 4.6574 4.6574 81.298 0.0 0.0 0.0 25.634614378569275 9.872202522567797 9.872202522567797 9.872202522567797 0 0.3494850021680094 2.0 1.2304764623983973 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QG{M(Oxidation (M))|F}[SG]{M(Oxidation (M))|F}K;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TMSV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QG[YQ]{M(Oxidation (M))|F}K;[W{M(Oxidation (M))|F}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TVSM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q][KT]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[W{M(Oxidation (M))|F}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TMSV 4.6574;3.6735;2.8022;2.6485;1.9638;1.1106;0.10859 -;-;-;-;-;-;- 336 + 1 1.809 82535.0 1.0 4564 4576 9130 HBL1_DMSO_200M_050219_2,9142 HBL1_DMSO_200M_050219_2,9142,HPTTMSVLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9143 49.718 101.0 552160.0 25 0 72680.0 + 7484 EGVKLCTMG 9 99 497.73865554961066 0 497.7379028201103 PEAK CID FTMS 0 0 0 9130 353204.15625 0.3084319439432411 -2 0.2289009094238281 13 Carbamidomethyl (C) _EGVKLC(Carbamidomethyl (C))TMG_ ENSG00000185532|ENST00000373980|PRKG1;nc|ENSG00000185532|Q13976|PRKG1 41.8396318013385 0.053988301646488 4 V 1 8 13.979 0.0 0.0 1.4071 0.0 0.0 708.3298979138714 183.0416964166625 891.3715943305339 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + V 1.4071 + + 65 + 1 1.809 46490.4 1.0 4565 4576 9130 HBL1_DMSO_200M_050219_2,9143 HBL1_DMSO_200M_050219_2,9143,EGVKLCTMG True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9144 49.721 135.0 398610.0 25 0 37220.0 -1 YKLSQNSMH 9 85 562.2628476793458 1122.5111424254917 2 562.2635986208916 MULTI CID FTMS 0 0 0 9130 289465.375 0.5505542219317493 -2 0.2289009094238281 14 Oxidation (M) _YKLSQNSM(Oxidation (M))H_ ENSG00000164190|ENST00000282516|NIPBL;nc|ENSG00000164190|Q6KC79-2|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL 6.723162845929126 0.6799819581413107 4 KY{I|L}{M(Oxidation (M))|F} 4 -1 21.67 0.0 0.0 1.9305 0.0 0.0 97.97438930315327 470.2438143365844 568.2182036397377 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 KY{I|L}{M(Oxidation (M))|F} 1.9305 - 220 + 1 1.809 48388.4 1.0 4566 4576 9130 HBL1_DMSO_200M_050219_2,9144 HBL1_DMSO_200M_050219_2,9144,YKLSQNSMH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9145 49.728 364.0 367590.0 25 0 39345.0 + -1 IMLTPQAL 8 123 451.7527688641812 901.4909847951624 2 451.7527038455009 MULTI CID FTMS 0 0 0 9130 286079.0625 0.5212283788720347 22 -1.6287269592285156 15 Oxidation (M) _IM(Oxidation (M))LTPQAL_ REV__chr12:132148659-132148844|14|17.21|0.93|4.2|+|0|NOC4L,None|1;REV__ENSG00000184967|ENST00000330579|NOC4L;REV__ENST00000535343.5_1_12:132632219-132636084:+|nuORF 32.116972079565 0.368454113111938 4 YPP[VG][VS]A{I|L} 9 -1 + 53.567 0.0 0.0 5.942 5.942 84.065 0.0 0.0 0.0 22.40340532742941 3.657424843733637 3.657424843733637 8.750612633917001 0 0.4247425010840047 2.0 0.4247425010840047 0.0 YPP[VG][VS]A{I|L};YPP[VG]{[VA]|[{I|L}G]}S{I|L};YPP[VG]{[VA]|[{I|L}G]}TV;Y{I|L}{M(Oxidation (M))|F}[Y{I|L}]A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[QN]|[E{I|L}]|[KN]};{[ET]|[MV]}A{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[QN]|[E{I|L}]|[KN]};[PG]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[QN]|[E{I|L}]|[KN]} 5.942;4.9713;4.7017;2.494;2.2808;1.7611;0.65667 -;-;-;-;-;-;- 447 + 1 1.809 104336.6 1.0 4567 4576 9130 HBL1_DMSO_200M_050219_2,9145 HBL1_DMSO_200M_050219_2,9145,IMLTPQAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9146 49.731 177.0 621160.0 25 0 83959.0 + 39847 VFFAVLRGW 9 92 365.54205293986325 1093.6043294197898 3 365.5415527224541 MULTI CID FTMS 0 0 0 9130 279247.0 0.2687748918722875 -4 0.346221923828125 16 Unmodified _VFFAVLRGW_ REV__ENSG00000129473|ENST00000250405|BCL2L2;REV__ENSG00000258643|ENST00000678502|BCL2L2-PABPN1;REV__nc|ENSG00000258643|Q92843-2|BCL2L2 23.1484247019978 0.2366544122328345 4 V{M(Oxidation (M))|F}[TP]RK 6 -1 45.667 0.0 0.0 4.1758 0.0 0.0 0.0 362.1413363092407 362.1413363092407 34.07312836760731 0.0 0.0 0.0 0 0.4247425010840047 1.0969100130080565 0.0 0.805462187404089 V{M(Oxidation (M))|F}[TP]RK 4.1758 - 63 + 1 1.809 97700.9 1.0 4568 4576 9130 HBL1_DMSO_200M_050219_2,9146 HBL1_DMSO_200M_050219_2,9146,VFFAVLRGW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9147 49.737 345.0 400310.0 25 0 32931.0 + 4252 DAPRLLKKI 9 126 351.89774824783115 1052.6714153436935 3 351.8973571658134 MULTI CID FTMS 0 0 0 9130 197468.828125 0.7569598592215739 -1 0.1304092407226562 17 Unmodified _DAPRLLKKI_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 26.88365393820708 0.1891292719743517 4 {[DA]|[EG]}{I|L}K 4 5 40.177 0.0 0.0 3.8167 0.0 0.0 0.0 622.4086397760374 622.4086397760374 19.10728139283883 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 {[DA]|[EG]}{I|L}K 3.8167 - 62 + 1 1.809 114399.8 1.0 4569 4576 9130 HBL1_DMSO_200M_050219_2,9147 HBL1_DMSO_200M_050219_2,9147,DAPRLLKKI False True DAPRLLKKI 49.737298 351.897357165813 2316730.25 9130.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 -0.3002574890851974 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9148 49.744 355.0 277980.0 25 0 29123.0 48 AAAVAGWLVV 10 121 478.77993803016096 955.545323127122 2 478.7796813845634 MULTI CID FTMS 0 0 0 9130 192173.140625 0.1025849279836695 4 -0.3130264282226562 18 Unmodified _AAAVAGWLVV_ ENST00000570769.5_1_16:3690973-3692987:+|nuORF 18.13498045792455 0.5432546531930572 4 [{I|L}P]Q[C(Carbamidomethyl (C))K]{I|L}VV 8 7 [{I|L}P]Q[C(Carbamidomethyl (C))K]{I|L} + + 20.063 2.8714 0.38835 2.0996 2.0996 44.659 0.0 0.0 0.0 0.0 7.844406447039063 0.0 0.0 0 0.75 0.0 0.0 0.0 [{I|L}P]Q[C(Carbamidomethyl (C))K]{I|L}VV 2.0996 - 386 + 1 1.809 78925.3 1.0 4570 4576 9130 HBL1_DMSO_200M_050219_2,9148 HBL1_DMSO_200M_050219_2,9148,AAAVAGWLVV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9149 49.758 800.0 169480.0 25 0 18423.0 + 5959 DQLCISFHHFP 11 125 672.3141554862992 1342.6137580393984 2 672.3146850466728 MULTI CID FTMS 0 0 0 9130 174240.65625 0.3054349186051174 -11 0.8430252075195312 19 Unmodified _DQLCISFHHFP_ REV__ENST00000556103.1_1_14:23946657-23947232:+|nuORF 15.248480904072842 0.7179608125786238 4 [PS]TAS{M(Oxidation (M))|F}SQ{I|L} 9 -1 40.293 0.0 0.0 3.0011 0.0 0.0 0.0 421.1455933267609 421.1455933267609 1.431759481772097 0.0 0.0 0.0 0 0.0 0.0 3.079689690656103 0.4247425010840047 [PS]TAS{M(Oxidation (M))|F}SQ{I|L} 3.0011 - 1823 1 1.809 106825.1 0.8899999856948853 4571 4576 9130 HBL1_DMSO_200M_050219_2,9149 HBL1_DMSO_200M_050219_2,9149,DQLCISFHHFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9150 49.771 800.0 379010.0 25 0 31320.0 + + 36984 TFIPVTSAK 9 213 482.2791231536985 962.543693374197 2 482.2784606814384 MULTI CID FTMS 0 0 0 9130 168225.59375 0.5684054399984457 -3 0.2940101623535156 20 Unmodified _TFISPLTGK_ nc|ENSG00000026508|P16070-5|CD44;nc|ENSG00000026508|P16070-10|CD44;nc|ENSG00000026508|P16070-3|CD44;nc|ENSG00000026508|P16070-17|CD44;nc|ENSG00000026508|P16070-7|CD44;nc|ENSG00000026508|P16070-11|CD44;nc|ENSG00000026508|P16070-6|CD44;nc|ENSG00000026508|P16070-4|CD44;nc|ENSG00000026508|P16070-16|CD44;ENSG00000026508|ENST00000428726|CD44;nc|ENSG00000026508|P16070-9|CD44 20.41453444215458 0.284085796332423 4 {I|L}T{M(Oxidation (M))|F}PVRCK 8 -1 + 36.347 0.0 0.0 3.7762 3.7762 65.412 0.0 0.0 0.0 0.8307233092532584 3.876897952242153 0.8307233092532584 1.2248627423174625 0 0.3296896906561032 0.6777807052660807 0.0 0.0689310325998027 {I|L}T{M(Oxidation (M))|F}PVRCK;{I|L}T{M(Oxidation (M))|F}PVTSAK;[{M(Oxidation (M))|F}T]{I|L}PVRCK;[{M(Oxidation (M))|F}T]{I|L}PVTSAK;{I|L}T{M(Oxidation (M))|F}PVTSKA;[{M(Oxidation (M))|F}T]{I|L}PVTSKA;{I|L}T{M(Oxidation (M))|F}PVT[KA]S;[{M(Oxidation (M))|F}T]{I|L}PVT[KA]S;{I|L}T{M(Oxidation (M))|F}P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KV;[{M(Oxidation (M))|F}T]{I|L}P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KV 3.7762;3.6489;3.4424;3.3151;3.1823;2.8485;2.6952;2.3614;1.7823;1.4485 -;-;-;-;-;-;-;-;-;- 4418 + 1 1.809 226805.1 0.8700000047683716 4572 4576 9130 HBL1_DMSO_200M_050219_2,9150 HBL1_DMSO_200M_050219_2,9150,TFISPLTGK False False TFIPVTSAK 49.771366 482.278460681438 7839381.5 9130.0 nc|ENSG00000026508|P16070-5|CD44;;nc|ENSG00000026508|P16070-10|CD44;;nc|ENSG00000026508|P16070-3|CD44;;nc|ENSG00000026508|P16070-17|CD44;;nc|ENSG00000026508|P16070-7|CD44;;nc|ENSG00000026508|P16070-11|CD44;;nc|ENSG00000026508|P16070-6|CD44;;nc|ENSG00000026508|P16070-4|CD44;;nc|ENSG00000026508|P16070-16|CD44;;ENSG00000026508|ENST00000428726|CD44;;nc|ENSG00000026508|P16070-9|CD44 6.592865784962972 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9152 49.776 91.0 605670.0 25 0 136760.0 + 15571 IPYKAKYV 8 95 491.2910534921581 980.5675540511164 2 492.2979308962822 MULTI CID FTMS 0 0 0 9151 164271.234375 0.1273629484335897 3 -0.2337799072265625 1 Unmodified _IPYKAKYV_ REV__ENSG00000117691|ENST00000366988|NENF;REV__ENST00000479589.5_1_1:212606272-212619345:+|nuORF 11.114462752807354 0.7467182956244686 4 N{M(Oxidation (M))|F} 2 -1 19.508 0.0 0.0 1.9895 0.0 0.0 701.4782729005289 0.0 701.4782729005289 0.0 -3.5121967796476383 -3.5121967796476383 0.0 0 0.0 0.0 0.0 0.3054621874040891 N{M(Oxidation (M))|F} 1.9895 - 85 + 1 1.809 49090.2 1.0 4573 4577 9151 HBL1_DMSO_200M_050219_2,9152 HBL1_DMSO_200M_050219_2,9152,IPYKAKYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9153 49.79 800.0 300370.0 25 0 13885.0 + 26308 NRGRWYKG 8 247 346.1858918843494 0 346.1858398318291 PEAK CID FTMS 0 0 0 9151 138958.640625 0.7074710286879133 51 -4.0843658447265625 2 Unmodified _NRGRWYKG_ REV__L1ME3E_dup115|chr1:53338288-53339127:+|1.047794229009607|0.187334311150075|2.48|48.0|17|2|sense 2.577480529830294 0.5910327097116076 4 K 1 -1 2.5752 0.0 0.0 0.37302 0.0 0.0 217.07178269272384 342.1559237115844 559.2277064043083 0.0 0.0 0.0 0.0 0 0.1861818737241735 0.0 0.0 0.0 K 0.37302 + + 3 + 1 1.809 192252.7 0.6000000238418579 4574 4577 9151 HBL1_DMSO_200M_050219_2,9153 HBL1_DMSO_200M_050219_2,9153,NRGRWYKG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9154 49.791 43.0 2288000.0 25 0 180560.0 + 31514 RQHEIVLKV 9 106 374.56452347952455 1120.6717410387737 3 374.5643188357353 MULTI CID FTMS 0 0 0 9151 746722.5625 0.9181650349323603 -1 0.0792465209960937 3 Unmodified _RQHEIVLKV_ ENSG00000069248|ENST00000261396|NUP133 32.89776655970281 0.1144444835665315 4 {[{M(Oxidation (M))|F}H]|[RQ]}HE{I|L}V{I|L} 7 2 28.294 0.0 0.0 2.5248 0.0 0.0 0.0 242.1505367753549 242.1505367753549 12.809801125943991 0.0 0.0 0.0 0 1.0114393726401687 0.0 0.0 0.0 + {[{M(Oxidation (M))|F}H]|[RQ]}HE{I|L}V{I|L} 2.5248 + + 450 1 1.809 90622.6 1.0 4575 4577 9151 HBL1_DMSO_200M_050219_2,9154 HBL1_DMSO_200M_050219_2,9154,RQHEIVLKV True True RQHEIVLKV 49.790857 374.564318835735 6740753.5 9151.0 ENSG00000069248|ENST00000261396|NUP133 5.590930938720703 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9155 49.795 203.0 455990.0 25 0 57675.0 + 4479 DAYAVKEAI 9 109 490.2597209231135 978.504888913027 2 490.2583190798759 MULTI CID FTMS 0 0 0 9151 332292.71875 0.9065234614207144 -1 0.0792465209960937 4 Unmodified _DAYAVKEAI_ ENSG00000162402|ENST00000294383|USP24 21.53697664764585 0.2571576504437394 4 {[DA]|[EG]}YA 4 5 34.157 0.0 0.0 3.4907 0.0 0.0 0.0 555.3161634895195 555.3161634895195 5.383643918355361 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YA 3.4907 + + 444 1 1.809 76238.7 1.0 4576 4577 9151 HBL1_DMSO_200M_050219_2,9155 HBL1_DMSO_200M_050219_2,9155,DAYAVKEAI False True DAYAVKEAI 49.794726 490.258319079876 1559713.625 9151.0 ENSG00000162402|ENST00000294383|USP24 5.111419836680095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9156 49.799 214.0 575320.0 25 0 86554.0 4278 DAQTQIQNI 9 128 515.7619246704228 1029.5092964076457 2 515.2682983279228 MULTI CID FTMS 0 0 0 9151 314522.375 0.2396601297253905 -1 0.0792465209960937 5 Unmodified _DAQTQIQNI_ ENSG00000100934|ENST00000307712|SEC23A;nc|ENSG00000100934|Q15436-2|SEC23A 17.11289562659939 0.3734572693229295 4 V{M(Oxidation (M))|F}ATT{I|L}K 7 7 40.685 0.0 0.0 3.9519 0.0 0.0 251.08539360096603 0.0 251.08539360096603 0.0 15.623664060771752 0.0 0.0 0 0.0 0.0 0.0 0.5649093276264391 V{M(Oxidation (M))|F}ATT{I|L}K 3.9519 - 378 + 1 1.809 93089.6 1.0 4577 4577 9151 HBL1_DMSO_200M_050219_2,9156 HBL1_DMSO_200M_050219_2,9156,DAQTQIQNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9157 49.804 284.0 271440.0 25 0 27910.0 + 2856 AVDEDRKMYL 10 87 620.3055795524751 1238.5966061717502 2 620.3052856326103 MULTI CID FTMS 0 0 0 9151 294593.6875 1.0 0 0.0 6 Unmodified _AVDEDRKMYL_ ENSG00000108094|ENST00000374749|CUL2;nc|ENSG00000108094|Q13617-2|CUL2 47.7319792270244 0.0934623409360514 4 {I|L}GDED{I|L} 6 6 68.977 0.0 0.0 5.569 0.0 0.0 0.0 593.2783907525999 593.2783907525999 39.54033167468005 0.0 0.0 0.0 0 0.805462187404089 2.0 0.7302046884880937 0.0 {I|L}GDED{I|L} 5.569 - 109 + 1 1.809 61251.3 1.0 4578 4577 9151 HBL1_DMSO_200M_050219_2,9157 HBL1_DMSO_200M_050219_2,9157,AVDEDRKMYL True True AVDEDRKMYL 49.804026 620.30528563261 2308381.75 9151.0 ENSG00000108094|ENST00000374749|CUL2;;nc|ENSG00000108094|Q13617-2|CUL2 5.725293795267741 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9158 49.806 92.0 498470.0 25 0 28321.0 29382 QLACKAPRLS 10 106 543.8104568104486 1085.6063606876971 2 543.8118163943291 MULTI CID FTMS 0 0 0 9151 275893.75 0.7290552282911679 1 -0.14178466796875 7 Unmodified _QLACKAPRLS_ ENST00000370355.2_1_10:102107065-102107828:+|nuORF 5.296884461304476 0.7021353017287152 4 Y 1 10 13.495 0.0 0.0 1.2431 0.0 0.0 904.5320026328128 0.0 904.5320026328128 0.0 3.116246451989504 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2431 - 58 + 1 1.809 40615.5 1.0 4579 4577 9151 HBL1_DMSO_200M_050219_2,9158 HBL1_DMSO_200M_050219_2,9158,QLACKAPRLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9159 49.812 340.0 312300.0 25 0 19590.0 + 15633 IQHSEFEEV 9 143 559.2617710944546 1116.5089892557091 2 559.2617065310478 MULTI CID FTMS 0 0 0 9151 278808.78125 0.7969309442355275 -1 0.0792465209960937 8 Unmodified _IQHSEFEEV_ ENSG00000108175|ENST00000334512|ZMIZ1;nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1 57.72198328787511 0.0273433238377839 4 [HQ]{I|L}SE{M(Oxidation (M))|F}EEV 9 2 + 70.332 0.0 0.0 6.2993 6.2993 77.401 0.0 0.0 0.0 2.2834748590793907 14.419832333581354 2.2834748590793907 2.2834748590793907 0 0.2887254899964357 0.0 1.5356668758921828 0.3494850021680094 [HQ]{I|L}SE{M(Oxidation (M))|F}EEV;[HS]EQ{I|L}{M(Oxidation (M))|F}EEV;[Q{I|L}]HSE{M(Oxidation (M))|F}EEV;[HA]G{I|L}SE{M(Oxidation (M))|F}EEV;[HS]E{M(Oxidation (M))|F}Q{I|L}EEV;[HS]EQ{M(Oxidation (M))|F}{I|L}EEV;{[ES]|[DT]|[{I|L}C]}HQ{I|L}{M(Oxidation (M))|F}EEV;[HQ]{I|L}SEE{M(Oxidation (M))|F}EV;{NN|[MP]|[D{I|L}]|[EV]}E[PS]S{I|L}EEV;[HA]G{I|L}SEE{M(Oxidation (M))|F}EV 6.2993;6.0948;5.9239;5.8744;5.6686;5.5784;5.4887;5.2894;5.2516;5.1774 -;-;+;-;-;-;-;-;-;- + 2749 1 1.809 86892.2 1.0 4580 4577 9151 HBL1_DMSO_200M_050219_2,9159 HBL1_DMSO_200M_050219_2,9159,IQHSEFEEV True True IQHSEFEEV 49.812222 559.261706531048 2860416.75 9151.0 ENSG00000108175|ENST00000334512|ZMIZ1;;nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1 7.497169176737468 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9160 49.818 324.0 313480.0 25 0 34644.0 + -1 RFFDGAKDV 9 122 527.7697886429208 1053.5250243526416 2 527.7692748904228 MULTI CID FTMS 0 0 0 9151 260649.234375 0.814658295805398 1 -0.14178466796875 9 Oxidation (M) _SGVRM(Oxidation (M))FKDV_ ENSG00000171940|ENST00000371471|ZNF217 32.78568957990786 0.1150597335874693 4 [VS]GQ{[HG]|PP}GAKDV 11 -1 + 56.569 0.0 0.0 5.3695 5.3695 76.16 0.0 0.0 0.0 5.303943707888763 16.575773191777927 5.303943707888763 3.5654732351381213 0 1.1861818737241734 0.9208187539523752 0.6861818737241735 0.0 [VS]GQ{[HG]|PP}GAKDV;[VS]GQ{[HG]|PP}QKDV;{[DA]|[EG]}KG{[HG]|PP}GAKDV;[VS]GQ[HN]AKDV;{[DA]|[EG]}KG{[HG]|PP}QKDV;[VS]G[AG]{[HG]|PP}GAKDV;{[QD]|[EN]|[WG]|[KD]|[RS]}Q{[HG]|PP}GAKDV;{[DA]|[EG]}KG[HN]AKDV;[VS]G[AG]{[HG]|PP}QKDV;{[QD]|[EN]|[WG]|[KD]|[RS]}Q{[HG]|PP}QKDV 5.3695;5.0311;4.8661;4.7453;4.5276;4.503;4.3397;4.2419;4.1612;4.0054 -;-;-;-;-;-;-;-;-;- 525 1 1.809 85665.0 1.0 4581 4577 9151 HBL1_DMSO_200M_050219_2,9160 HBL1_DMSO_200M_050219_2,9160,SGVRMFKDV False False RFFDGAKDV 49.818118 527.769274890423 2858818.75 9151.0 ENSG00000171940|ENST00000371471|ZNF217 3.226615190505981 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9161 49.827 530.0 313850.0 25 0 23738.0 + 13033 HATIIPKV 8 161 439.7765933106262 877.5386336880524 2 439.7764465212822 MULTI CID FTMS 0 0 0 9151 162891.15625 0.1258375624272981 -5 0.4254684448242187 10 Unmodified _HATIIPKV_ ENSG00000105568|ENST00000322088|PPP2R1A 60.38955033654506 0.1153153300159026 4 [HA]T{I|L}{I|L} 5 3 52.056 0.0 0.0 5.9321 0.0 0.0 0.0 339.20289928118456 339.20289928118456 31.60097167892005 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 1.1382104921644451 0.0 + [HA]T{I|L}{I|L} 5.9321 + + 271 1 1.809 133023.1 1.0 4582 4577 9151 HBL1_DMSO_200M_050219_2,9161 HBL1_DMSO_200M_050219_2,9161,HATIIPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9162 49.833 323.0 288190.0 25 0 33431.0 + 20836 LIYEETRGV 9 99 540.2907195887531 1078.566886244306 2 540.2908813357353 MULTI CID FTMS 0 0 0 9151 166556.234375 0.918826392169167 -1 0.0792465209960937 11 Unmodified _LLYWVDASL_ ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000158406|ENST00000377727|H4C8;ENSG00000275126|ENST00000618305|H4C13;ENSG00000273542|ENST00000611927|H4C12;ENSG00000197061|ENST00000377803|H4C3;ENSG00000276966|ENST00000615164|H4C5;ENSG00000278637|ENST00000617569|H4C1;ENSG00000270882|ENST00000578186|H4C14;ENSG00000197238|ENST00000355057|H4C11;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276180|ENST00000615353|H4C9;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16 28.486842064014134 0.1687311288560894 4 {I|L}{I|L}YEE[WK]V 8 6 + 67.37 0.0 0.0 6.2463 6.2463 81.168 0.0 0.0 0.0 45.6437180047066 1.4266750356873104 1.4266750356873104 4.661258704181996 0 0.7742275032520141 2.0 0.3252574989159953 0.0 {I|L}{I|L}YEE[WK]V;{I|L}{I|L}YEE{[NV]|[RG]}TV;{I|L}{I|L}YEE{[NV]|[RG]}S{I|L};{I|L}{I|L}YE[NG][KS]GV 6.2463;5.8141;5.5628;3.8312 -;-;-;- 203 + 1 1.809 75501.0 1.0 4583 4577 9151 HBL1_DMSO_200M_050219_2,9162 HBL1_DMSO_200M_050219_2,9162,LLYWVDASL False False LIYEETRGV 49.833324 540.290881335735 1487504.75 9151.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 5.177039782206218 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9163 49.843 471.0 292030.0 25 0 31052.0 + 22008 LPPPPPHAL 9 120 469.7768488850695 937.539144836939 2 469.7765991091728 MULTI CID FTMS 0 0 0 9151 140877.390625 0.6768467464350353 -14 1.0331993103027344 12 Unmodified _LPPPPPHAL_ ENSG00000119669|ENST00000238647|IRF2BPL 56.04830969593885 0.0282699710924866 4 {I|L}PPPPPHA{I|L} 9 0 + 74.556 0.0 0.0 7.9523 7.9523 93.851 0.0 0.0 0.0 61.27951596808839 5.3037195078585455 5.3037195078585455 12.328441339178193 0 0.6643943297944485 2.0 0.0 0.0 + + {I|L}PPPPPHA{I|L};{I|L}PPPP[YR]V;{I|L}PP[YK]HA{I|L};{I|L}P[YK]PHA{I|L};{I|L}P[YK][YR]V;{I|L}[YK]PPHA{I|L};{I|L}[YK]P[YR]V 7.9523;6.6373;6.0913;5.3268;4.0191;2.7405;1.4328 +;-;-;-;-;-;- + 1448 + 1 1.809 108846.8 1.0 4584 4577 9151 HBL1_DMSO_200M_050219_2,9163 HBL1_DMSO_200M_050219_2,9163,LPPPPPHAL True True LPPPPPHAL 49.842836 469.776599109173 7299404.0 9151.0 ENSG00000119669|ENST00000238647|IRF2BPL 6.314928372701009 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9164 49.857 800.0 238720.0 25 0 30588.0 3554 CYGRYWSYGFY 11 140 732.8047846126456 1463.595016292091 2 732.8043090701103 MULTI CID FTMS 0 0 0 9151 137069.515625 0.602979412661301 -1 0.0792465209960937 13 Unmodified _CYGRYWSYGFY_ ENSG00000244624|ENST00000334664|KRTAP20-1 20.41453444215458 0.6105011870913812 4 DEAQQDA{M(Oxidation (M))|F}Y 9 9 97.331 0.0 0.0 6.6501 0.0 0.0 378.1661854474625 0.0 378.1661854474625 0.0 69.14412223662629 0.0 0.0 0 1.0994850021680094 0.0 1.066901560044258 1.2302046884880935 DEAQQDA{M(Oxidation (M))|F}Y 6.6501 - 8887 1 1.809 136548.1 0.6200000047683716 4585 4577 9151 HBL1_DMSO_200M_050219_2,9164 HBL1_DMSO_200M_050219_2,9164,CYGRYWSYGFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9165 49.871 800.0 56935.0 25 0 6071.3 -1 FLLCIFEFFMQ 11 79 755.8624755740166 0 755.8624755740166 PEAK CID FTMS 0 0 0 -1 0 14 Carbamidomethyl (C),Oxidation (M) _FLLC(Carbamidomethyl (C))IFEFFM(Oxidation (M))Q_ ENST00000344726.9_2_6:79911083-79911197:-|nuORF 4.5288652416199255 0.4761840153648598 4 {I|L}[RH]TWNA 7 -1 19.569 0.0 0.0 1.2962 0.0 0.0 420.2062489240248 208.07337366275627 628.2796225867811 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}[RH]TWNA 1.2962 - 469 + 1 1.809 38058.2 0.6000000238418579 4586 4577 9151 HBL1_DMSO_200M_050219_2,9165 HBL1_DMSO_200M_050219_2,9165,FLLCIFEFFMQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9166 49.886 800.0 211670.0 25 0 18630.0 + 36419 SYWNHREL 8 166 552.7652119238373 1103.5158709144746 2 552.7643920779228 MULTI CID FTMS 0 0 0 9151 90997.9453125 0.2140679369346911 -3 0.3081474304199219 15 Unmodified _SYWNHREL_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 40.23920728925047 0.2302892926481531 4 SYWNH[W{I|L}]V 8 3 + 72.612 0.0 0.0 6.5801 6.5801 81.336 0.0 0.0 0.0 33.83031284438359 3.187587626244124 3.187587626244124 3.802112417116064 0 0.7742275032520141 2.0 0.0 0.8494850021680094 SYWNH[W{I|L}]V;SYWNH{[RE]|[WV]}{I|L};SYADNH[W{I|L}]V;SYADNH{[RE]|[WV]}{I|L};SYWN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};SYWGGH{[RE]|[WV]}{I|L};SYW[{M(Oxidation (M))|F}V]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};SYWGGH[W{I|L}]V;SYW{I|L}TC(Carbamidomethyl (C)){[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};SYADN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 6.5801;6.2355;5.9211;5.5765;5.4265;5.3962;5.1537;4.971;4.8502;4.7675 -;+;-;-;-;-;-;-;-;- + 1824 + 1 1.809 129128.4 0.550000011920929 4587 4577 9151 HBL1_DMSO_200M_050219_2,9166 HBL1_DMSO_200M_050219_2,9166,SYWNHREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9167 49.899 800.0 211120.0 25 0 47453.0 10560 FVFRWLLN 8 127 547.8091498862468 1093.6037468392935 2 547.8086425662041 MULTI CID FTMS 0 0 0 9151 89057.625 0.4425026743763651 -2 0.20965576171875 16 Unmodified _FVFRWLLN_ ENST00000269122.7_2_17:57744224-57744305:+|nuORF 26.34127834903884 0.4900704351052977 4 {M(Oxidation (M))|F}V{M(Oxidation (M))|F} 3 5 35.394 0.0 0.0 3.2364 0.0 0.0 0.0 697.3749450420548 697.3749450420548 18.97382952869892 0.0 0.0 0.0 0 0.4247425010840047 0.7958800173440752 0.0 0.0 + {M(Oxidation (M))|F}V{M(Oxidation (M))|F} 3.2364 + + 174 + 1 1.809 130911.5 0.5299999713897705 4588 4577 9151 HBL1_DMSO_200M_050219_2,9167 HBL1_DMSO_200M_050219_2,9167,FVFRWLLN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9168 49.913 800.0 142030.0 25 0 9565.2 -1 LNNLLENREMQ 11 138 695.3464732492671 0 695.3473388552666 PEAK CID FTMS 0 0 0 9151 89226.515625 0.5919432853662587 -1 0.0792465209960937 17 Oxidation (M) _LNNLLENREM(Oxidation (M))Q_ ENSG00000102763|ENST00000379310|VWA8;nc|ENSG00000102763|A3KMH1-2|VWA8;nc|ENSG00000102763|A3KMH1-3|VWA8 49.55428908609986 0.0564234517554811 4 NADQK 5 -1 48.218 0.0 0.0 3.4723 0.0 0.0 227.1290521200881 602.2665953158785 829.3956474359666 0.0 0.0 0.0 0.0 0 1.5356668758921828 0.0 0.2614393726401688 0.7059771852360797 NADQK 3.4723 - 414 + 1 1.809 87660.2 0.5400000214576721 4589 4577 9151 HBL1_DMSO_200M_050219_2,9168 HBL1_DMSO_200M_050219_2,9168,LNNLLENREMQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9170 49.918 75.0 883820.0 25 0 125950.0 15758 ISDEFSEVIK 10 63 583.8000999452494 1165.5856469572986 2 583.8004638552666 MULTI CID FTMS 0 0 0 9169 882604.9375 0.7549685404803745 1 -0.05316162109375 1 Unmodified _ISDEFSEVIK_ ENSG00000013016|ENST00000322054|EHD3;ENSG00000110047|ENST00000320631|EHD1 17.11289562659939 0.5604042439455784 4 V{I|L}K 3 7 28.284 0.0 0.0 2.4266 0.0 0.0 807.3272679063206 0.0 807.3272679063206 0.0 15.435695106011838 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3252574989159953 + V{I|L}K 2.4266 + + 44 + 1 1.808 53261.9 1.0 4590 4578 9169 HBL1_DMSO_200M_050219_2,9170 HBL1_DMSO_200M_050219_2,9170,ISDEFSEVIK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9171 49.926 445.0 186400.0 25 0 15748.0 + 41946 VQIEEVRQV 9 119 550.3087736714515 1098.602994409703 2 550.3091308474541 MULTI CID FTMS 0 0 0 9169 115703.5390625 0.0208712344763667 4 -0.2832489013671875 2 Unmodified _VQIEEVRQV_ ENSG00000143621|ENST00000361891|ILF2 76.82478488871298 0.0184607444814265 4 VQ{I|L}EEVRN{I|L} 9 2 + 92.378 0.0 0.0 8.4087 8.4087 96.659 0.0 0.0 0.0 75.89651247168975 8.767285528507955 8.767285528507955 24.436974992327123 0 1.1549471895720984 1.5228787452803376 1.5941876774005248 1.1989700043360187 VQ{I|L}EEVRN{I|L};V[AG]{I|L}EEVRN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RD]E{I|L}QV;VVAAEEVRN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RD]E{I|L}[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RD]GV[DV]V;VV{[CA]|SS}PEVRN{I|L};VQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}[WM]PV;{NN|[MP]|[D{I|L}]|[EV]}R{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}QV;[KA]{[QG]|[NA]}{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}QV 8.4087;6.1843;5.3806;4.9483;4.5424;3.9607;3.5169;3.2622;1.9881;1.7147 -;-;-;-;-;-;-;-;-;- 486 + 1 1.808 73387.3 1.0 4591 4578 9169 HBL1_DMSO_200M_050219_2,9171 HBL1_DMSO_200M_050219_2,9171,VQIEEVRQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9172 49.928 55.0 963800.0 25 0 65377.0 + 29237 QGVVTTLENV 10 83 530.2879436073257 1058.5613342814513 2 530.2880126833916 MULTI CID FTMS 0 0 0 9169 1308916.25 0.8097496320050976 -2 0.2210311889648437 3 Unmodified _QGVVTTLENV_ ENSG00000115414|ENST00000354785|FN1;ENST00000492816.6_1_2:216226280-216244056:-|nuORF;nc|ENSG00000115414|P02751-1|FN1;nc|ENSG00000115414|P02751-10|FN1;nc|ENSG00000115414|P02751-11|FN1;nc|ENSG00000115414|P02751-12|FN1;nc|ENSG00000115414|P02751-13|FN1;nc|ENSG00000115414|P02751-14|FN1;nc|ENSG00000115414|P02751-17|FN1;nc|ENSG00000115414|P02751-3|FN1;nc|ENSG00000115414|P02751-4|FN1;nc|ENSG00000115414|P02751-5|FN1;nc|ENSG00000115414|P02751-6|FN1;nc|ENSG00000115414|P02751-7|FN1;nc|ENSG00000115414|P02751-8|FN1;nc|ENSG00000115414|P02751-9|FN1 41.95555342248728 0.1369168616057562 4 [K{I|L}]QDT{I|L}ENV 9 5 + 75.02 0.0 0.0 7.0869 7.0869 82.895 0.0 0.0 0.0 3.611367018428865 11.9622725880631 3.611367018428865 3.611367018428865 0 0.9247425010840048 0.6989700043360187 1.274227503252014 0.2887254899964357 [K{I|L}]QDT{I|L}ENV;{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}K{I|L}ENV;[K{I|L}]QDT{I|L}EGGV;[K{I|L}][AG]DT{I|L}ENV;[KG][{I|L}A]DT{I|L}ENV;{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}K{I|L}EGGV;{[QD]|[EN]|[WG]|[KD]|[RS]}[K{I|L}]T{I|L}ENV;[{I|L}A][KG]DT{I|L}ENV;[K{I|L}][AG]DT{I|L}EGGV;[TA][DG]{I|L}K{I|L}ENV 7.0869;6.7458;6.2171;6.2171;5.9743;5.8759;5.8439;5.5285;5.3513;5.3194 -;-;-;-;-;-;-;-;-;- 663 1 1.808 49787.1 1.0 4592 4578 9169 HBL1_DMSO_200M_050219_2,9172 HBL1_DMSO_200M_050219_2,9172,QGVVTTLENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9173 49.929 68.0 750050.0 25 0 158460.0 + 15905 ISTEVNPKL 9 82 500.7880974390921 999.5616419449842 2 500.7879516482353 MULTI CID FTMS 0 0 0 9169 699077.5 1.0 0 0.0 4 Unmodified _ISTEVNPKL_ ENSG00000007545|ENST00000397412|CRAMP1 38.17557092003332 0.0854718145212029 4 {I|L}STEVNPK{I|L} 9 0 + 83.748 0.0 0.0 8.3785 8.3785 92.479 0.0 0.0 0.0 71.96510873325816 10.96887856256754 10.96887856256754 9.208187539523747 0 0.3807196863200844 2.0 0.0 0.0 + + {I|L}STEVNPK{I|L};{I|L}STEVGGPK{I|L};{I|L}[WM]VNPK{I|L};{I|L}ST[QA]VVV[PS];{I|L}[WM]VGGPK{I|L} 8.3785;7.4572;3.7739;3.3575;2.8473 +;-;-;-;- + 227 + 1 1.808 43354.0 1.0 4593 4578 9169 HBL1_DMSO_200M_050219_2,9173 HBL1_DMSO_200M_050219_2,9173,ISTEVNPKL True True ISTEVNPKL 49.929396 500.787951648235 5383199.5 9169.0 ENSG00000007545|ENST00000397412|CRAMP1 5.725865364074707 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9174 49.931 82.0 895180.0 25 0 145800.0 + 5244 DKEPLLRIP 9 72 360.88556629443656 1079.6348694835096 3 360.8851501345634 MULTI CID FTMS 0 0 0 9169 649121.0 0.1027666056857652 -5 0.5150413513183594 5 Unmodified _DKEPLLRIP_ REV__ENSG00000012232|ENST00000220562|EXTL3 13.042465956692816 0.4836390050082244 4 {I|L}PEDK 5 -1 52.735 0.0 0.0 4.8845 0.0 0.0 0.0 494.31069346781646 494.31069346781646 16.53720958383822 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3807196863200844 0.0 {I|L}PEDK 4.8845 - 39 + 1 1.808 69364.0 1.0 4594 4578 9169 HBL1_DMSO_200M_050219_2,9174 HBL1_DMSO_200M_050219_2,9174,DKEPLLRIP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9175 49.933 98.0 810420.0 25 0 92493.0 + 36421 SYWNHREL 8 86 368.84578869542975 1103.5155366864892 3 368.8454162478447 MULTI CID FTMS 0 0 0 9169 591771.8125 0.5265884554797774 -2 0.2210311889648437 6 Unmodified _SYWNHREL_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 22.65808497894818 0.5676258685752692 4 SYWN{I|L} 5 3 65.943 0.0 0.0 5.9758 0.0 0.0 0.0 437.1913241022094 437.1913241022094 56.61104478033212 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.9247425010840048 SYWN{I|L} 5.9758 - 143 + 1 1.808 68114.9 1.0 4595 4578 9169 HBL1_DMSO_200M_050219_2,9175 HBL1_DMSO_200M_050219_2,9175,SYWNHREL False True SYWNHREL 49.933357 368.845416247845 14052130.5 9169.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 8.59913969039917 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9176 49.935 64.0 858350.0 25 0 71932.0 + 22191 LPQEIQSRV 9 88 535.3037633141528 1068.5929736951057 2 535.3040649294853 MULTI CID FTMS 0 0 0 9169 423159.4375 0.8645804900750853 -1 0.14178466796875 7 Unmodified _LPQEIQSRV_ ENSG00000006194|ENST00000219069|ZNF263 47.594388314883695 0.0456443387682827 4 {I|L}PQE{I|L}Q 6 3 75.583 0.0 0.0 7.0732 0.0 0.0 0.0 357.1902254693969 357.1902254693969 55.12578788640525 0.0 0.0 0.0 0 0.6421590589602533 1.5228787452803376 0.3807196863200844 1.048455006504028 + {I|L}PQE{I|L}Q 7.0732 + + 110 + 1 1.808 47083.2 1.0 4596 4578 9169 HBL1_DMSO_200M_050219_2,9176 HBL1_DMSO_200M_050219_2,9176,LPQEIQSRV True True LPQEIQSRV 49.934911 535.304064929485 12624428.0 9169.0 ENSG00000006194|ENST00000219069|ZNF263 5.470357894897461 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9177 49.937 123.0 474760.0 25 0 40263.0 + 38220 TPRPSPSPMI 10 80 541.7874951194452 1081.5604373056904 2 541.7875244021416 MULTI CID FTMS 0 0 0 9169 343696.0 0.3581630564888435 -3 0.3514404296875 8 Unmodified _TPRPSPSPMI_ ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-2|SUPT6H;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 33.4449034751529 0.2267874087365337 4 PSPM{I|L} 5 5 56.938 0.0 0.0 5.2644 0.0 0.0 538.2877674787125 0.0 538.2877674787125 0.0 46.48062535455438 0.0 0.0 0 1.3494850021680094 0.0 0.8494850021680094 0.0 + PSPM{I|L} 5.2644 + + 252 1 1.808 55071.4 1.0 4597 4578 9169 HBL1_DMSO_200M_050219_2,9177 HBL1_DMSO_200M_050219_2,9177,TPRPSPSPMI False True TPRPSPSPMI 49.937452 541.787524402142 7551996.5 9169.0 nc|ENSG00000109111|Q7KZ85-2|SUPT6H;;ENSG00000109111|ENST00000314616|SUPT6H;;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 5.244216283162435 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9178 49.941 161.0 780130.0 25 0 107210.0 + 22829 LRPPVPHL 8 104 310.1958280855848 927.5656548569546 3 310.1953002810478 MULTI CID FTMS 0 0 0 9169 325358.25 0.548599213732337 -2 0.2210311889648437 9 Unmodified _LRPPVPHL_ REV__ENST00000401827.7_1_8:66753961-66754186:-|nuORF 11.640296217721598 0.738950129755968 4 V{I|L} 2 -1 18.583 0.0 0.0 2.0035 0.0 0.0 0.0 712.390855003339 712.390855003339 3.605384569831001 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L} 2.0035 - 49 + 1 1.808 106708.4 1.0 4598 4578 9169 HBL1_DMSO_200M_050219_2,9178 HBL1_DMSO_200M_050219_2,9178,LRPPVPHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9179 49.944 165.0 614860.0 25 0 42085.0 + 36588 TALVIHQRI 9 107 350.8855689814976 1049.634877544693 3 350.8852722048759 MULTI CID FTMS 0 0 0 9169 258153.9375 1.0 0 0.0 10 Unmodified _TALVIHQRI_ ENSG00000156853|ENST00000287461|ZNF689 29.84058131909904 0.1515068451768857 4 [TA]{I|L}V{I|L}H[KC]V 9 3 55.908 0.0 0.0 5.3264 0.0 0.0 0.0 82.06695734195546 82.06695734195546 37.74735947860492 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.6989700043360187 [TA]{I|L}V{I|L}H[KC]V 5.3264 - 143 + 1 1.808 88831.1 1.0 4599 4578 9169 HBL1_DMSO_200M_050219_2,9179 HBL1_DMSO_200M_050219_2,9179,TALVIHQRI False True TALVIHQRI 49.943846 350.885272204876 2897492.75 9169.0 ENSG00000156853|ENST00000287461|ZNF689 3.678120930989584 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9180 49.949 272.0 267560.0 25 0 21370.0 + 10824 FYYEQAPSA 9 109 538.2405873454987 1074.4666217577974 2 538.2405273318291 MULTI CID FTMS 0 0 0 9169 234083.84375 0.3304739428952507 -3 0.3514404296875 11 Unmodified _FYYEQAPSA_ ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000394455.6_1_14:68196461-68236507:-|nuORF;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-3|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 37.97399986684836 0.0865783450051559 4 {M(Oxidation (M))|F}Y{M(Oxidation (M))|F}PSA 6 4 34.434 0.0 0.0 3.2047 0.0 0.0 344.1716521306474 0.0 344.1716521306474 0.0 10.990095972794393 0.0 0.0 0 0.805462187404089 0.0 0.6694451763165201 0.0 {M(Oxidation (M))|F}Y{M(Oxidation (M))|F}PSA 3.2047 - 684 + 1 1.808 63581.5 1.0 4600 4578 9169 HBL1_DMSO_200M_050219_2,9180 HBL1_DMSO_200M_050219_2,9180,FYYEQAPSA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9181 49.952 187.0 448220.0 25 0 28579.0 + 36302 SYITSQEM 8 124 479.7138434908016 957.4131340484032 2 479.7134887576103 MULTI CID FTMS 0 0 0 9169 195428.65625 0.7911055422272008 -2 0.2210311889648437 12 Unmodified _SYITSQEM_ ENSG00000179933|ENST00000319074|C14orf119 24.67388899826682 0.525179942228231 4 T{I|L}TM 4 5 25.918 0.0 0.0 2.707 0.0 0.0 493.1856082689095 0.0 493.1856082689095 0.0 11.938200260161125 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L}TM 2.707 - 251 + 1 1.808 70480.6 1.0 4601 4578 9169 HBL1_DMSO_200M_050219_2,9181 HBL1_DMSO_200M_050219_2,9181,SYITSQEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9182 49.966 800.0 217370.0 25 0 28836.0 + 37275 TIPERGTIGV 10 164 521.7981358569532 0 521.7977783083916 PEAK CID FTMS 0 0 0 9169 162794.859375 0.8604890403359542 3 -0.1920623779296875 13 Unmodified _TIPERGTIGV_ ENST00000412391.6_2_19:36233501-36235273:-|nuORF;ENST00000587987.5_1_19:36233501-36235544:-|nuORF;ENST00000590135.5_1_19:36233501-36233795:-|nuORF;ENST00000591084.5_3_19:36233501-36234996:-|nuORF;ENST00000592913.5_1_19:36233501-36235052:-|nuORF;nc|ENSG00000161265|Q8WU68-2|U2AF1L4 24.99096001346401 0.2580721372233971 4 DVQE{[RE]|[WV]}T 7 7 17.977 0.0 0.0 1.726 0.0 0.0 99.1184141926188 82.06694971256093 181.1853639051797 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.5709991640913001 0.0 DVQE{[RE]|[WV]}T 1.726 - 729 + 1 1.808 137751.9 0.7699999809265137 4602 4578 9169 HBL1_DMSO_200M_050219_2,9182 HBL1_DMSO_200M_050219_2,9182,TIPERGTIGV False True TIPERGTIGV 49.966311 521.797778308392 4031351.5 9169.0 ENST00000592913.5_1_19:36233501-36235052:-|nuORF;;ENST00000412391.6_2_19:36233501-36235273:-|nuORF;;nc|ENSG00000161265|Q8WU68-2|U2AF1L4;;ENST00000591084.5_3_19:36233501-36234996:-|nuORF;;ENST00000590135.5_1_19:36233501-36233795:-|nuORF;;ENST00000587987.5_1_19:36233501-36235544:-|nuORF 1.2854093710581462 2.0 True 10.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 9184 49.971 2.8 19927000.0 25 0 4814900.0 -1 SVYKMGILS 9 68 507.2705188374884 1012.5264847417768 2 507.2709533572197 MULTI CID FTMS 0 0 0 9183 20034752.0 0.970115896268414 1 -0.0388336181640625 1 Oxidation (M) _SVYKM(Oxidation (M))GILS_ ENST00000304449.5_2_X:118725002-118725137:-|nuORF 9.38312468134398 0.5871240394367778 4 [VS]YMATT{I|L}K 9 -1 + 71.743 0.0 0.0 7.0855 7.0855 95.308 0.0 0.0 0.0 37.82956856894566 11.521598733774368 11.521598733774368 71.7427560249162 0 0.8494850021680094 2.0 0.0 0.1643943297944484 [VS]YMATT{I|L}K 7.0855 - 100 + 1 1.808 49815.5 1.0 4603 4579 9183 HBL1_DMSO_200M_050219_2,9184 HBL1_DMSO_200M_050219_2,9184,SVYKMGILS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9185 49.972 14.0 4560600.0 25 0 716220.0 + 22027 LPPPPPPAM 9 74 458.751710776598 915.488868619996 2 458.7517883181572 MULTI CID FTMS 0 0 0 9183 4108819.75 0.9289925426368404 -1 0.05316162109375 2 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 4 [{I|L}P]PPPP 6 3 52.44 0.0 0.0 5.7281 0.0 0.0 0.0 314.1182591320575 314.1182591320575 13.645074337010849 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.7281 + + 186 1 1.808 56786.2 1.0 4604 4579 9183 HBL1_DMSO_200M_050219_2,9185 HBL1_DMSO_200M_050219_2,9185,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9186 49.973 31.0 2425900.0 25 0 142990.0 + 21479 LPHPGLKV 8 88 430.7713277632493 859.5281025932986 2 430.7713806033134 MULTI CID FTMS 0 0 0 9183 2126527.0 0.782246377811191 1 -0.0388336181640625 3 Unmodified _LPHPGLKV_ ENSG00000119787|ENST00000378954|ATL2;ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2;nc|ENSG00000198513|Q8WXF7-2|ATL1 67.03532852164291 0.116292309877964 4 {I|L}PHPG{I|L}KV 8 0 + 66.195 0.0 0.0 7.7014 7.7014 86.731 0.0 0.0 0.0 45.92649987379705 11.400472848224226 11.400472848224226 5.400990676322905 0 1.524227503252014 1.6989700043360187 0.0 0.2059771852360797 + + {I|L}PHPG{I|L}KV;{I|L}PHV[PA]KV;{I|L}PVH[PA]KV;{I|L}PHV[KG][{I|L}P];{I|L}PVH[KG][{I|L}P];{I|L}[{I|L}T]K{[WT]|[RM]}V 7.7014;7.073;5.6781;5.3687;3.9737;2.1445 +;-;-;-;-;- + 285 + 1 1.808 64345.1 1.0 4605 4579 9183 HBL1_DMSO_200M_050219_2,9186 HBL1_DMSO_200M_050219_2,9186,LPHPGLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9187 49.974 45.0 953100.0 25 0 45776.0 + 21134 LPAPPTQNM 9 90 484.7471199658434 967.4796869984868 2 484.7473632693291 MULTI CID FTMS 0 0 0 9183 1159708.125 0.2776205462182485 3 -0.2300872802734375 4 Unmodified _LPAPPTQNM_ ENSG00000141380|ENST00000415083|SS18;ENSG00000184402|ENST00000331758|SS18L1;nc|ENSG00000141380|Q15532-2|SS18;nc|ENSG00000184402|O75177-2|SS18L1;nc|ENSG00000184402|O75177-5|SS18L1 61.357469665136826 0.0253304979873734 4 [{I|L}P]APPTQNM 9 0 + 68.343 0.0 0.0 7.064 7.064 89.643 0.0 0.0 0.0 18.69666231504993 55.08655041508895 18.69666231504993 9.208187539523747 0 1.274227503252014 1.154901959985743 0.5 0.0 + + [{I|L}P]APPTQNM;[{I|L}P]APPT[AG]NM;[{I|L}P]APPTQGGM;[{I|L}P]APPT[AG]GGM;[PA]{I|L}PPTQNM;[PA]P{I|L}PTQNM;[PA]{I|L}PPT[AG]NM;[PA]{I|L}PPTQGGM;[PA]P{I|L}PT[AG]NM;[PA]P{I|L}PTQGGM 7.064;6.1122;6.1122;5.1649;4.8839;4.2116;3.9322;3.9322;3.2598;3.2598 +;-;-;-;-;-;-;-;-;- + 197 1 1.808 38310.3 1.0 4606 4579 9183 HBL1_DMSO_200M_050219_2,9187 HBL1_DMSO_200M_050219_2,9187,LPAPPTQNM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9188 49.976 55.0 797610.0 25 0 96097.0 + 17001 KIYEGQVEV 9 67 532.7848608794221 1063.5551688256442 2 532.7853271365166 MULTI CID FTMS 0 0 0 9183 913418.875 0.0147932779302458 6 -0.4474716186523437 5 Unmodified _KIYEGQVEV_ ENSG00000122406|ENST00000370321|RPL5;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 39.94969957227396 0.0757326808254658 4 {[QG]|[NA]}EY[K{I|L}]VEV 9 6 + 51.207 0.0 0.0 4.8147 4.8147 69.316 0.0 0.0 0.0 1.249387366082999 16.478174818886373 1.249387366082999 1.249387366082999 0 0.8807196863200843 0.0 0.7059771852360797 0.4247425010840047 {[QG]|[NA]}EY[K{I|L}]VEV;[QA]DY[K{I|L}]VEV;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}Y[K{I|L}]EV;{[QG]|[NA]}EYV[K{I|L}]EV;{[QG]|[NA]}EVY[K{I|L}]EV;[YE]{[QG]|[NA]}[K{I|L}]VEV;[QA]DYV[K{I|L}]EV;[QA]DVY[K{I|L}]EV;[YE][K{I|L}]{[QG]|[NA]}VEV;{[QG]|[NA]}VEY[K{I|L}]EV 4.8147;4.6972;4.3979;3.7743;3.7743;3.7605;3.6568;3.6568;3.1945;3.1855 -;-;-;-;-;-;-;-;-;- 154 1 1.808 44502.0 1.0 4607 4579 9183 HBL1_DMSO_200M_050219_2,9188 HBL1_DMSO_200M_050219_2,9188,KIYEGQVEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9189 49.978 124.0 348260.0 25 0 19495.0 8437 ESLPTMFSML 10 70 578.2738471600309 1154.5331413868616 2 578.2742187380791 MULTI CID FTMS 0 0 0 9183 513925.5625 0.3378819082902359 2 -0.1389007568359375 6 Unmodified _ESLPTMFSML_ ENST00000426186.1_3_2:87098444-87121919:+|nuORF 14.838274106304384 0.5985701837916485 4 [DN]ESVGS 7 9 34.965 0.0 0.0 3.0285 0.0 0.0 0.0 463.2413424127563 463.2413424127563 9.74886953798432 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 [DN]ESVGS 3.0285 - 184 + 1 1.808 38432.7 1.0 4608 4579 9183 HBL1_DMSO_200M_050219_2,9189 HBL1_DMSO_200M_050219_2,9189,ESLPTMFSML False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9190 49.981 133.0 668640.0 25 0 136460.0 30388 RAPAGPKP 8 92 397.2377137451525 792.4608745571051 2 397.2372619509697 MULTI CID FTMS 0 0 0 9183 504472.0625 0.7323081358931424 -2 0.1949462890625 7 Unmodified _RAPAGPKP_ ENST00000395738.2_1_22:50921135-50921831:+|nuORF 5.230669730166228 0.792582437072536 4 {I|L}{I|L}HR 4 8 50.165 0.0 0.0 6.3303 0.0 0.0 255.12212093970652 0.0 255.12212093970652 0.0 38.571231544599485 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.9731975075880328 {I|L}{I|L}HR 6.3303 - 53 + 1 1.808 75900.2 1.0 4609 4579 9183 HBL1_DMSO_200M_050219_2,9190 HBL1_DMSO_200M_050219_2,9190,RAPAGPKP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9191 49.984 137.0 457420.0 25 0 45108.0 -1 LPPPPPPAM 9 111 466.7492067760757 931.4838606189514 2 466.7491027712822 MULTI CID FTMS 0 0 0 9183 280373.59375 0.4020036388412021 4 -0.3389205932617187 8 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPPPA{M(Oxidation (M))|F} 9 -1 [{I|L}P]P + + 43.761 22.676 7.3817 4.698 4.698 51.32 0.0 0.0 0.0 0.0 12.66834404526875 0.0 0.0 0 1.110924374808178 0.0 0.0 0.0 [{I|L}P]PPPPPA{M(Oxidation (M))|F} 4.698 + + 439 + 1 1.808 52165.0 1.0 4610 4579 9183 HBL1_DMSO_200M_050219_2,9191 HBL1_DMSO_200M_050219_2,9191,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9192 49.987 138.0 604300.0 25 0 38567.0 + 33278 SFPHTTPSM 9 128 502.7291644123043 1003.4437758914088 2 502.7296020388603 MULTI CID FTMS 0 0 0 9183 238714.96875 0.3914620362415851 7 -0.4939994812011719 9 Unmodified _SFPHTTPSM_ ENSG00000197111|ENST00000546463|PCBP2;ENST00000547717.1_1_12:53848575-53861193:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 39.957323273325 0.0756908302845263 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM 8 4 + 41.068 0.0 0.0 4.0927 4.0927 79.182 0.0 0.0 0.0 19.296831374325905 11.826382099970084 11.826382099970084 9.948500216800936 0 0.3494850021680094 2.0 0.5 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TVSM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HM][HK]SM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HM][HA]{M(Oxidation (M))|F}K;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]TMSV;[W{M(Oxidation (M))|F}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TVSM;[W{M(Oxidation (M))|F}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TMSV 4.0927;3.1013;2.9141;2.2134;1.9979;0.11854 -;-;-;-;-;- 246 + 1 1.808 67938.7 1.0 4611 4579 9183 HBL1_DMSO_200M_050219_2,9192 HBL1_DMSO_200M_050219_2,9192,SFPHTTPSM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9193 49.988 70.0 723500.0 25 0 106360.0 + 9136 FFQYWFLLNV 10 92 459.57127454857937 1375.691994245938 3 460.2375671267509 MULTI CID FTMS 0 0 0 9183 211961.5625 0.5019794558145039 -3 0.2741928100585937 10 Unmodified _FFQYWFLLNV_ REV__ENSG00000118322|ENST00000327245|ATP10B;REV__ENSG00000145246|ENST00000273859|ATP10D;REV__nc|ENSG00000145246|Q9P241-2|ATP10D 1.6526216038709556 0.7189921496796233 4 M 1 -1 16.99 0.0 0.0 1.235 0.0 0.0 1226.6405701510146 0.0 1226.6405701510146 0.0 4.225490200071285 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.235 - 154 + 1 1.808 44137.7 1.0 4612 4579 9183 HBL1_DMSO_200M_050219_2,9193 HBL1_DMSO_200M_050219_2,9193,FFQYWFLLNV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9194 49.991 156.0 455340.0 25 0 29564.0 -1 GCLSEEVGSL 10 113 525.7406866849259 1049.4668204366517 2 526.2455932497978 MULTI CID FTMS 0 0 0 9183 173119.140625 1.0 0 0.0 11 Carbamidomethyl (C) _GC(Carbamidomethyl (C))LSEEVGSL_ ENSG00000142511|ENST00000270590|GPR32 9.38312468134398 0.6832340498775793 4 [TA]{I|L}V 4 -1 24.526 0.0 0.0 2.337 0.0 0.0 0.0 662.2065414662017 662.2065414662017 9.823208723679253 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [TA]{I|L}V 2.337 - 147 1 1.808 62293.6 1.0 4613 4579 9183 HBL1_DMSO_200M_050219_2,9194 HBL1_DMSO_200M_050219_2,9194,GCLSEEVGSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9195 50.005 800.0 259450.0 25 0 20369.0 + 15274 IPHQFIHRI 9 198 387.5619318409713 1159.6639661231138 3 387.5609008669853 MULTI CID FTMS 0 0 0 9183 88683.046875 0.3654742994788574 -2 0.1949462890625 12 Unmodified _IPHQFIHRI_ ENSG00000152642|ENST00000282541|GPD1L 47.594388314883695 0.0456443387682827 4 {I|L}PHQ{M(Oxidation (M))|F}{I|L}HR{I|L} 9 0 + 78.101 0.0 0.0 6.7348 6.7348 78.048 0.0 0.0 0.0 26.064247967304112 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.7887254899964358 0.958607314841775 0.0 0.805462187404089 + + {I|L}PHQ{M(Oxidation (M))|F}{I|L}HR{I|L};{I|L}PHQ{M(Oxidation (M))|F}{I|L}H{I|L}R;{I|L}PHQ{M(Oxidation (M))|F}{I|L}{I|L}HR;{I|L}PH[AG]{M(Oxidation (M))|F}{I|L}HR{I|L};{I|L}PHQ{I|L}{M(Oxidation (M))|F}HR{I|L};{I|L}PH[AG]{M(Oxidation (M))|F}{I|L}H{I|L}R;{I|L}PHQ{I|L}{M(Oxidation (M))|F}H{I|L}R;{I|L}PHQ{M(Oxidation (M))|F}{I|L}{I|L}{[HG]|PP}V;{I|L}PH{I|L}Q{M(Oxidation (M))|F}HR{I|L};{I|L}PH[AG]{M(Oxidation (M))|F}{I|L}{I|L}HR 6.7348;6.583;6.2398;5.9408;5.8922;5.7889;5.7404;5.6371;5.4808;5.4458 +;-;-;-;-;-;-;-;-;- + 1113 + 1 1.808 167135.5 0.4399999976158142 4614 4579 9183 HBL1_DMSO_200M_050219_2,9195 HBL1_DMSO_200M_050219_2,9195,IPHQFIHRI True True IPHQFIHRI 50.00519 387.560900866985 1724237.75 9183.0 ENSG00000152642|ENST00000282541|GPD1L 3.68269141515096 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9197 50.01 13.0 3909400.0 25 0 500860.0 + 976 AFQERLNSY 9 68 564.27803085338 0 564.2781249880791 PEAK CID FTMS 0 0 0 9196 4156233.0 1.0 0 0.0 1 Unmodified _AFQERLNSY_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 82.5293158979368 0.0120067423199408 4 Q[RN]QNS 6 5 30.934 0.0 0.0 2.7459 0.0 0.0 218.10518958689164 178.05144678287346 396.1566363697651 0.0 0.0 0.0 0.0 0 1.5356668758921828 0.0 0.9802046884880936 0.8494850021680094 Q[RN]QNS 2.7459 - 49 + 1 1.808 41097.5 1.0 4615 4580 9196 HBL1_DMSO_200M_050219_2,9197 HBL1_DMSO_200M_050219_2,9197,AFQERLNSY True True AFQERLNSY 50.009619 564.278124988079 27450042.0 9196.0 nc|ENSG00000113569|O75694-2|NUP155;;ENSG00000113569|ENST00000231498|NUP155 7.258728345235188 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9198 50.011 68.0 1331200.0 25 0 227010.0 + 39909 VFPTRTARF 9 73 365.54205293986325 1093.6043294197898 3 365.5417663455009 MULTI CID FTMS 0 0 0 9196 1038962.375 1.0 0 0.0 2 Unmodified _VFPTRTARF_ ENSG00000213339|ENST00000250237|QTRT1 22.736283301280096 0.2418982879461534 4 V{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 6 30.445 0.0 0.0 2.7839 0.0 0.0 0.0 697.3754826804208 697.3754826804208 18.662575976154923 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.7839 - 20 + 1 1.808 81872.0 1.0 4616 4580 9196 HBL1_DMSO_200M_050219_2,9198 HBL1_DMSO_200M_050219_2,9198,VFPTRTARF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9199 50.013 59.0 882440.0 25 0 100640.0 + + 28742 VPVPSQQEI 9 89 498.7771091138352 995.5396652944704 2 498.7721435427666 MULTI CID FTMS 0 0 0 9196 842256.8125 0.1856450863851562 -10 0.7915267944335938 3 Unmodified _PVVSPHLFT_ ENSG00000240682|ENST00000393295|ISY1;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;nc|ENSG00000240682|Q9ULR0-2|ISY1;nc|ENSG00000240682|Q9ULR0-1|ISY1 13.50788311687929 0.4710407108020397 4 [VP]V[PS]QQ{[QN]|[E{I|L}]|[KN]} 9 -1 + 33.178 0.0 0.0 3.3327 3.3327 76.337 0.0 0.0 0.0 13.748162098249 15.742946587693972 13.748162098249 9.208187539523756 0 0.0 1.0 0.3054621874040891 0.0 [VP]V[PS]QQ{[QN]|[E{I|L}]|[KN]};[VP]V[PS][AG]Q{[QN]|[E{I|L}]|[KN]};[VP]V[PS]Q[AG]{[QN]|[E{I|L}]|[KN]};[VP]{[QS]|[NT]}[VP]Q{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[VP]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[AG]SPV[VP]Q{[QN]|[E{I|L}]|[KN]};{[QS]|[NT]}PV[VP]Q{[QN]|[E{I|L}]|[KN]};{[DA]|[EG]}[KP][VP]Q{[QN]|[E{I|L}]|[KN]};[VP][HK]HH{[QN]|[E{I|L}]|[KN]} 3.3327;2.4077;2.4077;1.4447;0.89137;0.72688;0.45807;0.45807;0.31477 -;-;-;-;-;-;-;-;- 175 1 1.808 46776.6 1.0 4617 4580 9196 HBL1_DMSO_200M_050219_2,9199 HBL1_DMSO_200M_050219_2,9199,PVVSPHLFT False False VPVPSQQEI 50.012708 498.772143542767 7616422.0 9196.0 ENSG00000240682|ENST00000393295|ISY1;;ENST00000393292.7_1_3:128848926-128853725:-|nuORF;;nc|ENSG00000240682|Q9ULR0-2|ISY1;;nc|ENSG00000240682|Q9ULR0-1|ISY1 1.3105836709340413 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9200 50.014 76.0 844420.0 25 0 74221.0 + 6146 DSYTPKVI 8 87 461.7478237351223 921.4810945370448 2 461.7490112185478 MULTI CID FTMS 0 0 0 9196 513776.875 0.0279805547086945 -5 0.4434356689453125 4 Unmodified _DSYTPKVI_ ENSG00000133872|ENST00000256255|SARAF;ENST00000517569.1_1_8:29931365-29940465:-|nuORF 34.10243960390752 0.3329570729325616 4 W{M(Oxidation (M))|F}YTVPG 7 6 29.518 0.0 0.0 3.2033 0.0 0.0 0.0 68.0514162652953 68.0514162652953 10.361300909143054 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W{M(Oxidation (M))|F}YTVPG 3.2033 - 233 + 1 1.808 53955.7 1.0 4618 4580 9196 HBL1_DMSO_200M_050219_2,9200 HBL1_DMSO_200M_050219_2,9200,DSYTPKVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9201 50.017 129.0 390870.0 25 0 51337.0 + 5960 DQLCISFHHFP 11 60 672.3141554862992 1342.6137580393984 2 672.3144409060478 MULTI CID FTMS 0 0 0 9196 401363.875 0.7035702523742046 -7 0.6070365905761719 5 Unmodified _DQLCISFHHFP_ REV__ENST00000556103.1_1_14:23946657-23947232:+|nuORF 10.799506525563784 0.8105043987015127 4 C{[QN]|[E{I|L}]|[KN]}N 4 -1 19.565 0.0 0.0 1.4572 0.0 0.0 537.2546404630297 343.1639498346313 880.418590297661 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 1.1861818737241734 C{[QN]|[E{I|L}]|[KN]}N 1.4572 - 81 + 1 1.808 40739.3 1.0 4619 4580 9196 HBL1_DMSO_200M_050219_2,9201 HBL1_DMSO_200M_050219_2,9201,DQLCISFHHFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9202 50.019 90.0 1187200.0 25 0 225050.0 + 5040 DGYAVDRAI 9 105 490.2457798726577 978.4770068121154 2 490.2427551150322 MULTI CID FTMS 0 0 0 9196 361458.3125 0.0239158557385353 -3 0.2337799072265625 6 Unmodified _DGYAVDRAI_ ENSG00000104824|ENST00000221419|HNRNPL;ENST00000595164.5_1_19:39327364-39331218:-|nuORF;ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;ENST00000601664.1_1_19:39329532-39330816:-|nuORF;nc|ENSG00000104824|P14866-2|HNRNPL 26.268140514670165 0.1969607489560049 4 [DG]YA 4 5 26.982 0.0 0.0 2.7575 0.0 0.0 0.0 569.304526913931 569.304526913931 5.555173278498312 0.0 0.0 0.0 0 1.0 0.958607314841775 0.3494850021680094 0.0 + [DG]YA 2.7575 + + 243 1 1.808 86906.3 1.0 4620 4580 9196 HBL1_DMSO_200M_050219_2,9202 HBL1_DMSO_200M_050219_2,9202,DGYAVDRAI False True DGYAVDRAI 50.019079 490.2444 222977328.0 9196.0 ENST00000595443.5_1_19:39327988-39329682:-|nuORF;;ENST00000601664.1_1_19:39329532-39330816:-|nuORF;;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;;nc|ENSG00000104824|P14866-2|HNRNPL;;ENSG00000104824|ENST00000221419|HNRNPL;;ENST00000595164.5_1_19:39327364-39331218:-|nuORF 1.3444701631863911 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9203 50.021 82.0 637730.0 25 0 79327.0 + 21566 LPKGWLCL 8 91 465.268623403495 0 465.2698852419853 PEAK CID FTMS 0 0 0 9196 287357.6875 1.0 0 0.0 7 Unmodified _LPKGWLCL_ REV__ENST00000336798.11_2_1:31350222-31350498:-|nuORF 15.768221252438446 0.4767174489346095 4 {I|L} 1 -1 6.9897 0.0 0.0 0.75278 0.0 0.0 581.3374044224213 231.0779207818969 812.4153252043182 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.75278 + + 60 + 1 1.808 45080.5 1.0 4621 4580 9196 HBL1_DMSO_200M_050219_2,9203 HBL1_DMSO_200M_050219_2,9203,LPKGWLCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9204 50.027 343.0 306940.0 25 0 68147.0 21763 LPMLLQAL 8 118 449.7771310182354 897.5397091032709 2 449.7772399783134 MULTI CID FTMS 0 0 0 9196 288391.125 0.8956111393898869 -1 0.0388336181640625 8 Unmodified _LPMLLQAL_ ENSG00000089053|ENST00000261819|ANAPC5;ENST00000534976.5_1_12:121747778-121756274:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5 14.581692164780916 0.6954967302934248 4 TG 2 8 17.831 0.0 0.0 1.9866 0.0 0.0 126.11434488349796 610.3329561822874 736.4473010657854 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 TG 1.9866 - 122 + 1 1.808 88348.5 1.0 4622 4580 9196 HBL1_DMSO_200M_050219_2,9204 HBL1_DMSO_200M_050219_2,9204,LPMLLQAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9205 50.03 169.0 432190.0 25 0 49695.0 + 36983 TFIPVTSAK 9 94 482.2791231536985 962.543693374197 2 482.2792846560478 MULTI CID FTMS 0 0 0 9196 279473.25 0.9442921977146872 1 -0.100067138671875 9 Unmodified _TFIPVTSAK_ ENSG00000026508|ENST00000428726|CD44;nc|ENSG00000026508|P16070-10|CD44;nc|ENSG00000026508|P16070-11|CD44;nc|ENSG00000026508|P16070-16|CD44;nc|ENSG00000026508|P16070-17|CD44;nc|ENSG00000026508|P16070-3|CD44;nc|ENSG00000026508|P16070-4|CD44;nc|ENSG00000026508|P16070-5|CD44;nc|ENSG00000026508|P16070-6|CD44;nc|ENSG00000026508|P16070-7|CD44;nc|ENSG00000026508|P16070-9|CD44 23.78978130925829 0.2284941198415988 4 TVP{I|L}MV 6 7 34.257 0.0 0.0 3.559 0.0 0.0 304.1746998517594 0.0 304.1746998517594 0.0 9.81508216873415 0.0 0.0 0 1.048455006504028 0.0 0.3807196863200844 0.0 TVP{I|L}MV 3.559 - 205 1 1.808 60642.7 1.0 4623 4580 9196 HBL1_DMSO_200M_050219_2,9205 HBL1_DMSO_200M_050219_2,9205,TFIPVTSAK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9206 50.035 223.0 346640.0 25 0 38323.0 44765 YPLNLPSV 8 93 451.7527688641812 901.4909847951624 2 451.7526733279228 MULTI CID FTMS 0 0 0 9196 248110.0625 0.4520498792487276 26 -2.164989471435547 10 Unmodified _YPLNLPSV_ ENSG00000158528|ENST00000433360|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A;nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A;nc|ENSG00000158528|Q9ULJ8|PPP1R9A 21.74664581756881 0.5868176546531598 4 YP{I|L}{M(Oxidation (M))|F}K 5 5 52.831 0.0 0.0 5.8604 0.0 0.0 0.0 250.1200197809204 250.1200197809204 39.3360688456422 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YP{I|L}{M(Oxidation (M))|F}K 5.8604 - 180 + 1 1.808 62370.2 1.0 4624 4580 9196 HBL1_DMSO_200M_050219_2,9206 HBL1_DMSO_200M_050219_2,9206,YPLNLPSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9207 50.042 421.0 362020.0 25 0 22843.0 + 41788 VPVPAPRSI 9 150 468.287641637221 934.560730341242 2 468.2884399294853 MULTI CID FTMS 0 0 0 9196 207353.1875 0.6819570897390017 4 -0.3724632263183594 11 Unmodified _VPVPAPRSI_ ENSG00000159314|ENST00000685559|ARHGAP27;ENST00000529357.5_1_17:43475293-43487738:-|nuORF;ENST00000531735.5_1_17:43481393-43507645:-|nuORF;nc|ENSG00000159314|Q6ZUM4-2|ARHGAP27;nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27 27.628801355627647 0.1796483985696185 4 {I|L}PAP 4 6 48.972 0.0 0.0 5.2401 0.0 0.0 0.0 553.3107654909719 553.3107654909719 10.898487830376377 0.0 0.0 0.0 0 0.8494850021680094 1.154901959985743 0.0 0.0 {I|L}PAP 5.2401 - 458 + 1 1.808 119510.9 1.0 4625 4580 9196 HBL1_DMSO_200M_050219_2,9207 HBL1_DMSO_200M_050219_2,9207,VPVPAPRSI False True VPVPAPRSI 50.042081 468.288439929485 5336788.5 9196.0 ENST00000529357.5_1_17:43475293-43487738:-|nuORF;;ENSG00000159314|ENST00000685559|ARHGAP27;;nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27;;nc|ENSG00000159314|Q6ZUM4-2|ARHGAP27;;ENST00000531735.5_1_17:43481393-43507645:-|nuORF 2.760248382886251 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9208 50.056 800.0 303470.0 25 0 27525.0 + 18511 KYQAQDNFM 9 180 572.7580017003875 1143.5014504675748 2 572.7583495974541 MULTI CID FTMS 0 0 0 9196 173028.71875 0.0942378971716575 -3 0.2337799072265625 12 Unmodified _KYQAQDNFM_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 111.28704002717404 0.0050101734347035 4 [YK]QAQDN{M(Oxidation (M))|F}M 9 0 + 90.718 0.0 0.0 7.9334 7.9334 78.445 0.0 0.0 0.0 0.2952482801949827 16.478174818886373 0.2952482801949827 0.2952482801949827 0 1.174742501084005 0.0 0.9027084789088669 2.1861818737241734 + + [YK]QAQDN{M(Oxidation (M))|F}M;{[QV]|[N{I|L}]|[RA]|[KV]}V[YE]DN{M(Oxidation (M))|F}M;{[HG]|PP}PQAQDN{M(Oxidation (M))|F}M;{[QV]|[N{I|L}]|[RA]|[KV]}VD[YE]N{M(Oxidation (M))|F}M;[AG]YKAQDN{M(Oxidation (M))|F}M;[YQ]KAQDN{M(Oxidation (M))|F}M;[KA][YG]AQDN{M(Oxidation (M))|F}M;{[QV]|[N{I|L}]|[RA]|[KV]}V{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{M(Oxidation (M))|F}M;[QA]YKQDN{M(Oxidation (M))|F}M;[YK][AG]AQDN{M(Oxidation (M))|F}M 7.9334;7.9076;7.7149;7.6728;7.6662;7.5609;7.4834;7.2952;7.1419;7.1281 +;-;-;-;-;-;-;-;-;- + 6934 1 1.808 177261.9 0.8299999833106995 4626 4580 9196 HBL1_DMSO_200M_050219_2,9208 HBL1_DMSO_200M_050219_2,9208,KYQAQDNFM True True KYQAQDNFM 50.055912 572.758349597454 47776899.0 9196.0 ENST00000379752.5_1_1:157029186-157029948:-|nuORF;;nc|ENSG00000122692|Q2TAY7-2|SMU1;;ENSG00000122692|ENST00000397149|SMU1 7.618496576944987 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9209 50.068 711.0 465510.0 25 0 39043.0 -1 0 194 399.7817856164626 797.5490182997253 2 399.7813293337822 MULTI CID FTMS 0 0 0 9196 139825.796875 0.5290038943232545 -1 0.0388336181640625 13 4 [VG]{I|L}KR{I|L}{I|L} 7 -1 + 43.228 0.0 0.0 5.4201 5.4201 84.498 0.0 0.0 0.0 20.00590151547524 10.40517053068058 10.40517053068058 9.921746624880427 0 0.9489700043360187 1.3979400086720375 0.0 0.3807196863200844 [VG]{I|L}KR{I|L}{I|L};[VG]{I|L}{I|L}[RK]{I|L};{I|L}[VG]KR{I|L}{I|L};{I|L}[VG]{I|L}[RK]{I|L};{I|L}{I|L}[VG][RK]{I|L} 5.4201;4.176;4.0411;2.797;1.504 -;-;-;-;- 237 + 1 1.808 254842.8 1.0 4627 4580 9196 HBL1_DMSO_200M_050219_2,9209 HBL1_DMSO_200M_050219_2,9209, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9210 50.071 152.0 250970.0 25 0 32530.0 + 15876 ISQNQCPSL 9 83 495.23816155305735 988.4617701729148 2 495.2388488650322 MULTI CID FTMS 0 0 0 9196 137000.25 1.0 0 0.0 14 Unmodified _ISQNQCPSL_ REV__ENST00000415397.6_1_7:92191598-92205104:-|nuORF 15.847184025352805 0.4077185912009129 4 {I|L} 1 -1 14.604 0.0 0.0 1.4775 0.0 0.0 857.3666906824835 0.0 857.3666906824835 0.0 2.6316963869492227 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4775 + + 102 + 1 1.808 35197.3 1.0 4628 4580 9196 HBL1_DMSO_200M_050219_2,9210 HBL1_DMSO_200M_050219_2,9210,ISQNQCPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9211 50.076 276.0 253820.0 25 0 38345.0 24909 MPPDPRPTL 9 96 512.2682993912351 1022.5220458492704 2 512.2678710818291 MULTI CID FTMS 0 0 0 9196 120738.59375 0.2431649345192645 -9 0.7456092834472656 15 Unmodified _MPPDPRPTL_ ENST00000465017.5_1_9:139685822-139687379:+|nuORF;ENST00000483187.5_1_9:139685862-139687379:+|nuORF 13.042465956692816 0.4836390050082244 4 MP[DP]{I|L} 5 4 46.07 0.0 0.0 4.5055 0.0 0.0 0.0 466.2434481256469 466.2434481256469 32.25772496747986 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 MP[DP]{I|L} 4.5055 - 128 + 1 1.808 64389.0 1.0 4629 4580 9196 HBL1_DMSO_200M_050219_2,9211 HBL1_DMSO_200M_050219_2,9211,MPPDPRPTL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9212 50.091 800.0 196600.0 25 0 12509.0 + 44575 YPFHKQPPTYV 11 140 688.8534785406637 1375.6924041481273 2 688.8524047732353 MULTI CID FTMS 0 0 0 9196 114690.171875 0.4853108297167279 -7 0.6070365905761719 16 Unmodified _YPFHKQPPTYV_ ENSG00000100258|ENST00000474879|LMF2;ENST00000504717.1_1_22:50941822-50943237:-|nuORF;nc|ENSG00000100258|Q9BU23-2|LMF2;nc|ENSG00000100258|Q9BU23-3|LMF2 92.20098385977256 0.000583166206543 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}HKQPPTYV 11 0 + 119.79 0.0 0.0 8.7078 8.7078 89.715 0.0 0.0 0.0 12.147864282705529 16.575773191777927 12.147864282705529 6.505149978319906 0 3.559894379144197 1.6989700043360187 1.805462187404089 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}HKQPPTYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}HKQPTPYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}HK[AG]PPTYV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YHKQPPTYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}HK[AG]PTPYV;YP{M(Oxidation (M))|F}HKQPPTYV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YHKQPTPYV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YHK[AG]PPTYV;YP{M(Oxidation (M))|F}HK[AG]PPTYV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HYKQPTPYV 8.7078;8.2349;8.0442;7.8247;7.5713;7.4473;7.3519;7.1612;6.7838;6.7149 +;-;-;-;-;+;-;-;-;- + 8278 1 1.808 112758.5 0.7099999785423279 4630 4580 9196 HBL1_DMSO_200M_050219_2,9212 HBL1_DMSO_200M_050219_2,9212,YPFHKQPPTYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9213 50.105 800.0 614830.0 25 0 408740.0 -1 DIFHGRLLCS 10 106 609.3088204383358 0 609.3094360232353 PEAK CID FTMS 0 0 0 9196 117958.2734375 0.4961308542725721 -1 0.0388336181640625 17 Carbamidomethyl (C) _DIFHGRLLC(Carbamidomethyl (C))S_ ENSG00000172159|ENST00000304195|FRMD3;nc|ENSG00000172159|A2A2Y4-2|FRMD3;nc|ENSG00000172159|A2A2Y4-5|FRMD3 10.823927491677226 0.3685635357628707 4 ETAQ 4 -1 19.24 0.0 0.0 1.5815 0.0 0.0 251.074191400365 533.3204439752561 784.3946353756212 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 ETAQ 1.5815 - 101 + 1 1.808 356618.3 0.699999988079071 4631 4580 9196 HBL1_DMSO_200M_050219_2,9213 HBL1_DMSO_200M_050219_2,9213,DIFHGRLLCS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9215 50.11 9.7 4329100.0 25 0 586310.0 + 4279 DAQTQIQNI 9 76 515.7619246704228 1029.5092964076457 2 515.7622558474541 MULTI CID FTMS 0 0 0 9214 5536542.5 1.0 0 0.0 1 Unmodified _DAQTQIQNI_ ENSG00000100934|ENST00000307712|SEC23A;nc|ENSG00000100934|Q15436-2|SEC23A 71.92227651296345 0.0203558744033348 4 {[DA]|[EG]}GATQ{I|L} 7 5 52.386 0.0 0.0 5.0885 0.0 0.0 0.0 370.1721131403205 370.1721131403205 25.716292104367326 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 1.5356668758921828 0.3252574989159953 {[DA]|[EG]}GATQ{I|L} 5.0885 - 560 1 1.813 38347.6 1.0 4632 4581 9214 HBL1_DMSO_200M_050219_2,9215 HBL1_DMSO_200M_050219_2,9215,DAQTQIQNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9216 50.111 64.0 1449600.0 25 0 152910.0 + 13034 HATIIPKV 8 87 439.7765933106262 877.5386336880524 2 439.7766296267509 MULTI CID FTMS 0 0 0 9214 1149728.375 0.8881944207053813 -1 0.100067138671875 2 Unmodified _HATIIPKV_ ENSG00000105568|ENST00000322088|PPP2R1A 67.34385681178166 0.1158486345035644 4 [HA]T{I|L}{I|L} 5 3 55.718 0.0 0.0 6.3494 0.0 0.0 0.0 339.2033258141029 339.2033258141029 34.57538004117421 0.0 0.0 0.0 0 1.274227503252014 1.5228787452803376 1.1549471895720984 0.0 + [HA]T{I|L}{I|L} 6.3494 + + 153 1 1.813 77798.6 1.0 4633 4581 9214 HBL1_DMSO_200M_050219_2,9216 HBL1_DMSO_200M_050219_2,9216,HATIIPKV True True HATIIPKV 50.111243 439.776629626751 41512647.0 9214.0 ENSG00000105568|ENST00000322088|PPP2R1A 6.584633827209473 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9217 50.112 41.0 1663900.0 25 0 297980.0 + 21274 LPEDKPRLI 9 70 540.824583029168 1079.634613125136 2 540.8245727419853 MULTI CID FTMS 0 0 0 9214 1055912.25 0.5654305658423577 -2 0.1389007568359375 3 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 36.506200033944 0.094635877243972 4 {I|L}PEDK 5 4 68.756 0.0 0.0 6.3684 0.0 0.0 0.0 494.30882282558815 494.30882282558815 43.349621957594096 0.0 0.0 0.0 0 1.3807196863200843 2.0 0.0 0.0 + {I|L}PEDK 6.3684 + + 105 + 1 1.813 59432.7 1.0 4634 4581 9214 HBL1_DMSO_200M_050219_2,9217 HBL1_DMSO_200M_050219_2,9217,LPEDKPRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9218 50.115 96.0 1167200.0 25 0 100890.0 27571 PLCPDDCP 8 128 430.17013097778846 858.3257090223769 2 430.1701232790947 MULTI CID FTMS 0 0 0 9214 474647.5625 1.0 0 0.0 4 Unmodified _PLCPDDCP_ ENSG00000166823|ENST00000300057|MESP1 6.354104778181461 0.7857632046190106 4 {I|L} 1 7 12.218 0.0 0.0 1.4235 0.0 0.0 727.230705825891 0.0 727.230705825891 0.0 -0.1038607332085952 -0.1038607332085952 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4235 + + 88 + 1 1.813 88736.1 1.0 4635 4581 9214 HBL1_DMSO_200M_050219_2,9218 HBL1_DMSO_200M_050219_2,9218,PLCPDDCP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9219 50.117 111.0 599620.0 25 0 42210.0 + 2153 APYPTPAQV 9 85 472.2480499366312 942.4815469400623 2 472.2479736208916 MULTI CID FTMS 0 0 0 9214 464638.4375 0.1014021490195838 -13 1.0344009399414062 5 Unmodified _APYPTPAQV_ ENSG00000198807|ENST00000361487|PAX9 63.562846038646086 0.0241094678104353 4 [PA][TP]Y[PA]QV 9 2 + 38.819 0.0 0.0 4.1188 4.1188 72.887 0.0 0.0 0.0 11.883257154726929 13.490057869657107 11.883257154726929 4.771212547196626 0 0.9124379954164592 1.154901959985743 0.7742275032520141 0.0 [PA][TP]Y[PA]QV;[PA]Y[TP][PA]QV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[TP][PA]QV;[PA]Q{[QS]|[NT]}[VS]QV;[PA]AG{[QS]|[NT]}[VS]QV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TP]A[PA]QV;[PA][TP]A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QV;[PA]GA{[QS]|[NT]}[VS]QV;[TP][PA]Y[PA]QV;{NN|[MP]|[D{I|L}]|[EV]}{[ET]|[MV]}A[PA]QV 4.1188;3.6126;2.858;2.7053;2.5727;2.5386;2.3316;2.2533;2.1518;2.0678 -;+;-;-;-;-;-;-;-;- + 412 1 1.813 56885.3 1.0 4636 4581 9214 HBL1_DMSO_200M_050219_2,9219 HBL1_DMSO_200M_050219_2,9219,APYPTPAQV True True APYPTPAQV 50.116832 472.247973620892 422759424.0 9214.0 ENSG00000198807|ENST00000361487|PAX9 6.961541175842285 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9220 50.121 248.0 467170.0 25 0 60128.0 -1 VTSGMMYALY 10 136 584.2557452827376 1166.4969376322751 2 584.2551147341728 MULTI CID FTMS 0 0 0 9214 447740.40625 1.0 0 0.0 6 2 Oxidation (M) _VTSGM(Oxidation (M))M(Oxidation (M))YALY_ ENSG00000156162|ENST00000414645|DPY19L4 14.838274106304384 0.5985701837916485 4 {[TV]|[{I|L}S]}S[YC(Carbamidomethyl (C))]{I|L}SS 8 -1 51.814 0.0 0.0 4.4419 0.0 0.0 0.0 266.0791681613787 266.0791681613787 35.277802413633566 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.1307196863200843 0.0 {[TV]|[{I|L}S]}S[YC(Carbamidomethyl (C))]{I|L}SS 4.4419 - 1533 + 1 1.813 89712.8 1.0 4637 4581 9214 HBL1_DMSO_200M_050219_2,9220 HBL1_DMSO_200M_050219_2,9220,VTSGMMYALY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9221 50.123 88.0 711890.0 25 0 55858.0 + -1 SFCQNTTL 8 97 485.7189030280449 969.4232531228896 2 485.7190734744072 MULTI CID FTMS 0 0 0 9214 375476.9375 0.8047310860337562 -1 0.100067138671875 7 Carbamidomethyl (C) _SFC(Carbamidomethyl (C))QNTTL_ REV__ENSG00000118777|ENST00000237612|ABCG2;REV__nc|ENSG00000118777|Q9UNQ0-2|ABCG2 18.13498045792455 0.6430038125133779 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[HG]|PP}[{I|L}A]{I|L}P 8 -1 14.843 0.0 0.0 1.5311 0.0 0.0 0.0 143.93822515461582 143.93822515461582 -0.3477251345862679 0.0 -0.3477251345862679 0.0 0 0.0 2.0 0.5 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[HG]|PP}[{I|L}A]{I|L}P 1.5311 - 423 1 1.813 52088.4 1.0 4638 4581 9214 HBL1_DMSO_200M_050219_2,9221 HBL1_DMSO_200M_050219_2,9221,SFCQNTTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9222 50.126 136.0 634580.0 25 0 51434.0 + 16982 KIWDPVHRV 9 112 383.8893487267547 1148.646216780464 3 383.8891174197197 MULTI CID FTMS 0 0 0 9214 373296.90625 0.584456744675771 -1 0.100067138671875 8 Unmodified _KIWDPVHRV_ ENSG00000134900|ENST00000376052|TPP2;nc|ENSG00000134900|P29144|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 46.0223103267499 0.0490911897871712 4 [K{I|L}]WDPVV[RH] 9 2 + 62.246 0.0 0.0 5.419 5.419 80.506 0.0 0.0 0.0 13.300756084811807 6.989700043360188 6.989700043360188 6.989700043360188 0 1.1549471895720984 0.8538719643217619 0.0 0.805462187404089 [K{I|L}]WDPVV[RH];[K{I|L}]WDPVH[RV];[K{I|L}]WDVPV[RH];[K{I|L}]WDVPH[RV];[K{I|L}]WVPDV[RH];[K{I|L}]WVDPV[RH];[K{I|L}]WVPDH[RV];[K{I|L}]WVDPH[RV];[K{I|L}]WDV[HV][RP];[K{I|L}]WVYW[RV] 5.419;4.8105;4.7028;4.0943;3.9365;3.8521;3.328;3.2436;2.5424;2.2865 -;+;-;-;-;-;-;-;-;- + 693 + 1 1.813 79037.8 1.0 4639 4581 9214 HBL1_DMSO_200M_050219_2,9222 HBL1_DMSO_200M_050219_2,9222,KIWDPVHRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9223 50.129 159.0 478510.0 25 0 86958.0 + 39059 TVVKAISGV 9 102 437.27398288333296 872.533412833466 2 437.2737304568291 MULTI CID FTMS 0 0 0 9214 303126.1875 0.3974689766435031 -1 0.100067138671875 9 Unmodified _TVVKAISGV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 29.081581746732265 0.1611639662936252 4 {[TV]|[{I|L}S]}VRR{[QD]|[EN]|[WG]|[KD]|[RS]} 7 5 + 40.998 0.0 0.0 4.6988 4.6988 85.246 0.0 0.0 0.0 11.054300642647586 3.290587192642249 3.290587192642249 40.99825690406732 0 0.4247425010840047 2.0 0.3494850021680094 0.0 {[TV]|[{I|L}S]}VRR{[QD]|[EN]|[WG]|[KD]|[RS]} 4.6988 - 361 + 1 1.813 62950.2 1.0 4640 4581 9214 HBL1_DMSO_200M_050219_2,9223 HBL1_DMSO_200M_050219_2,9223,TVVKAISGV False True TVVKAISGV 50.129291 437.273730456829 5681350.5 9214.0 ENSG00000180574|ENST00000538173|EIF2S3B;;ENSG00000130741|ENST00000253039|EIF2S3;;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 5.7580240567525225 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9224 50.134 262.0 358920.0 25 0 35857.0 + 41375 VPKSVTVLD 9 132 479.28467156056456 0 479.2848998904228 PEAK CID FTMS 0 0 0 9214 233407.328125 0.9812416729009404 1 -0.0911865234375 10 Unmodified _VPKSVTVLD_ REV__ENSG00000145703|ENST00000274364|IQGAP2;REV__ENST00000509741.1_1_5:75970496-75973199:+|nuORF;REV__nc|ENSG00000145703|Q13576-2|IQGAP2;REV__nc|ENSG00000145703|Q13576-3|IQGAP2 21.53697664764585 0.1871382778112851 4 P 1 -1 7.3464 0.0 0.0 0.768 0.0 0.0 99.06778315078276 757.4113253229124 856.4791084736952 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 P 0.768 + + 127 + 1 1.813 76477.5 1.0 4641 4581 9214 HBL1_DMSO_200M_050219_2,9224 HBL1_DMSO_200M_050219_2,9224,VPKSVTVLD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9225 50.141 362.0 423980.0 25 0 34154.0 + 4690 DAYYKLRHI 9 136 393.5490564171422 1177.625339851627 3 393.5482971072197 MULTI CID FTMS 0 0 0 9214 191864.5625 0.3160236950368095 -2 0.1389007568359375 11 Unmodified _DAYYKLRHI_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000587957.1_1_17:42953300-42956953:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 37.97399986684836 0.0865783450051559 4 DAYYK{I|L}RH{I|L} 9 0 + 68.815 0.0 0.0 5.8436 5.8436 77.072 0.0 0.0 0.0 30.81215024481537 5.00602350569185 5.00602350569185 3.0102999566398125 0 0.3054621874040891 1.6989700043360187 0.0 0.0 + + DAYYK{I|L}RH{I|L};DAYY{I|L}KRH{I|L};DAYYK{I|L}R{I|L}H;DAY{I|L}YKRH{I|L};DAYY{I|L}KR{I|L}H;DA{I|L}YYKRH{I|L};DAY{I|L}YKR{I|L}H;DA{I|L}YYKR{I|L}H;D{I|L}AYYKRH{I|L};D{I|L}AYYKR{I|L}H 5.8436;5.5879;5.4185;5.3323;5.1628;5.0767;4.9072;4.6516;3.119;2.6939 +;-;-;-;-;-;-;-;-;- + 322 + 1 1.813 124989.9 1.0 4642 4581 9214 HBL1_DMSO_200M_050219_2,9225 HBL1_DMSO_200M_050219_2,9225,DAYYKLRHI True True DAYYKLRHI 50.140655 393.54829710722 4563508.0 9214.0 nc|ENSG00000108883|Q15029-3|EFTUD2;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2;;ENST00000587957.1_1_17:42953300-42956953:-|nuORF 6.151906490325928 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9226 50.15 547.0 595350.0 25 0 69171.0 + 40208 VGRASSLPKL 10 238 343.2136803288323 1026.619211586697 3 343.2128173708916 MULTI CID FTMS 0 0 0 9214 182493.640625 0.1566266176687203 -2 0.1389007568359375 12 Unmodified _VGRASSLPKL_ REV__ENSG00000135870|ENST00000367696|RC3H1;REV__nc|ENSG00000135870|Q5TC82-2|RC3H1 26.268140514670165 0.3785003716575977 4 [VG]{I|L}KW[PS]K{I|L} 9 -1 + 64.641 0.0 0.0 6.2964 6.2964 84.897 0.0 0.0 0.0 17.57007180900061 8.016323462331663 8.016323462331663 8.016323462331663 0 0.805462187404089 2.0 0.9247425010840048 0.7215141619232908 [VG]{I|L}KW[PS]K{I|L};[VG]{I|L}KW[PS]{I|L}K;[VG]{I|L}KWTPVK;[VG]{I|L}KW[KS]P{I|L};[VG]{I|L}KWTPKV;[VG]{I|L}{I|L}{M(Oxidation (M))|F}P{I|L}R{I|L};R{I|L}KDA[PS]K{I|L};R{I|L}{I|L}[NS][PS]K{I|L};[VG]{I|L}{I|L}{M(Oxidation (M))|F}[R{I|L}]P{I|L};[VG]{I|L}KW[KP]S{I|L} 6.2964;5.5156;5.4929;5.3227;5.1942;5.063;4.585;4.4911;4.461;4.4118 -;-;-;-;-;-;-;-;-;- 1566 + 1 1.813 259997.9 1.0 4643 4581 9214 HBL1_DMSO_200M_050219_2,9226 HBL1_DMSO_200M_050219_2,9226,VGRASSLPKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9227 50.158 432.0 377100.0 25 0 21981.0 + 25305 NAFLSKSSV 9 185 476.7599679591832 951.5053829851664 2 476.7602722048759 MULTI CID FTMS 0 0 0 9214 187667.578125 0.5449006906981948 -2 0.1389007568359375 13 Unmodified _NAFLSKSSV_ ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213 38.17557092003332 0.0854718145212029 4 {[QG]|[NA]}{M(Oxidation (M))|F}{I|L}S 5 4 54.01 0.0 0.0 5.6763 0.0 0.0 0.0 416.2160433404906 416.2160433404906 14.171110174257166 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.5994850021680094 0.0 + {[QG]|[NA]}{M(Oxidation (M))|F}{I|L}S 5.6763 + + 1047 + 1 1.813 125784.3 1.0 4644 4581 9214 HBL1_DMSO_200M_050219_2,9227 HBL1_DMSO_200M_050219_2,9227,NAFLSKSSV True True NAFLSKSSV 50.157934 476.760272204876 5497764.0 9214.0 ENSG00000173821|ENST00000582970|RNF213;;nc|ENSG00000173821|Q63HN8|RNF213;;nc|ENSG00000173821|Q63HN8-4|RNF213 5.608493725458781 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9228 50.167 535.0 321340.0 25 0 37490.0 10358 FSLAWGGI 8 152 425.724621902561 849.434690871922 2 425.7243835330009 MULTI CID FTMS 0 0 0 9214 132230.4375 1.0 0 0.0 14 Unmodified _FSLAWGGI_ ENSG00000103599|ENST00000335894|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH;nc|ENSG00000103599|Q86VS3-3|IQCH;nc|ENSG00000103599|Q86VS3-4|IQCH 22.4526382665184 0.5719518724627818 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA 4 5 37.329 0.0 0.0 4.3946 0.0 0.0 0.0 484.2545260065063 484.2545260065063 18.91269106268697 0.0 0.0 0.0 0 0.5356668758921829 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA 4.3946 - 307 + 1 1.813 136498.5 1.0 4645 4581 9214 HBL1_DMSO_200M_050219_2,9228 HBL1_DMSO_200M_050219_2,9228,FSLAWGGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9229 50.181 800.0 156870.0 25 0 12329.0 + 39153 TYNTQVNFM 9 153 567.2503295149439 1132.4861060966878 2 567.2512695193291 MULTI CID FTMS 0 0 0 9214 114572.375 0.520402682582292 -7 0.6419944763183594 15 Oxidation (M) _TYNTQVNFM(Oxidation (M))_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7684558-7685401:-|nuORF 71.92227651296345 0.0203558744033348 4 [YT]NTQV 6 3 47.937 0.0 0.0 4.2329 0.0 0.0 0.0 423.1327485129565 423.1327485129565 12.72550560095879 0.0 0.0 0.0 0 0.7059771852360797 2.0 1.174742501084005 0.0 + [YT]NTQV 4.2329 + + 1302 1 1.813 100517.4 0.7200000286102295 4646 4581 9214 HBL1_DMSO_200M_050219_2,9229 HBL1_DMSO_200M_050219_2,9229,TYNTQVNFM True False TYNTQVNFM 50.181168 567.251269519329 3261765.25 9214.0 ENST00000595288.5_1_19:7684558-7685401:-|nuORF;;ENSG00000076924|ENST00000358368|XAB2 7.487099011739095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9230 50.196 800.0 90665.0 25 0 9368.7 -1 PCHELCRHCFY 11 123 732.8047846126456 1463.595016292091 2 732.8054077029228 MULTI CID FTMS 0 0 0 9214 112165.828125 0.4934261630318716 3 -0.2723960876464844 16 Carbamidomethyl (C) _PCHELCRHC(Carbamidomethyl (C))FY_ ENST00000374199.8_1_9:116054008-116054197:+|nuORF 20.41453444215458 0.6105011870913812 4 DEAQQDA{M(Oxidation (M))|F}Y 9 -1 77.802 0.0 0.0 5.3158 0.0 0.0 378.1661244123063 0.0 378.1661244123063 0.0 62.228408191691344 0.0 0.0 0 0.5 0.0 0.2887254899964357 0.6549471895720985 DEAQQDA{M(Oxidation (M))|F}Y 5.3158 - 697 1 1.813 53714.8 0.6499999761581421 4647 4581 9214 HBL1_DMSO_200M_050219_2,9230 HBL1_DMSO_200M_050219_2,9230,PCHELCRHCFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9232 50.201 9.8 6431200.0 25 0 1005600.0 + 21277 LPEDKPRLI 9 61 360.88556629443656 1079.6348694835096 3 360.8852111697197 MULTI CID FTMS 0 0 0 9231 6000266.5 0.9499415693145138 -1 0.0911865234375 1 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 21.53697664764585 0.2571576504437394 4 {I|L}PEDKP 6 3 44.742 0.0 0.0 4.1442 0.0 0.0 0.0 397.2566012018188 397.2566012018188 15.445312593723983 0.0 0.0 0.0 0 0.0 0.0 0.5 0.4247425010840047 + {I|L}PEDKP 4.1442 + + 57 + 1 1.813 60173.5 1.0 4648 4582 9231 HBL1_DMSO_200M_050219_2,9232 HBL1_DMSO_200M_050219_2,9232,LPEDKPRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9233 50.202 46.0 672000.0 25 0 43480.0 + 45004 YPSQPPVTTV 10 72 544.7853181156505 0 544.7849609255791 PEAK CID FTMS 0 0 0 9231 1153939.625 0.8026093995068633 -2 0.191253662109375 2 Unmodified _YPSQPPVTTV_ ENSG00000074319|ENST00000251968|TSG101;ENST00000543087.5_1_11:18512432-18536353:-|nuORF;ENST00000545247.6_1_11:18505395-18536277:-|nuORF;nc|ENSG00000074319|Q99816-2|TSG101 29.84058131909904 0.2190118766058498 4 T[VP]PY 5 8 19.749 0.0 0.0 1.8159 0.0 0.0 218.12946083891967 309.1210116022094 527.2504724411291 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.5 0.0 T[VP]PY 1.8159 - 61 + 1 1.813 32941.1 1.0 4649 4582 9231 HBL1_DMSO_200M_050219_2,9233 HBL1_DMSO_200M_050219_2,9233,YPSQPPVTTV False True YPSQPPVTTV 50.202144 544.784960925579 17835962.0 9231.0 ENST00000545247.6_1_11:18505395-18536277:-|nuORF;;ENSG00000074319|ENST00000251968|TSG101;;nc|ENSG00000074319|Q99816-2|TSG101;;ENST00000543087.5_1_11:18512432-18536353:-|nuORF 5.6273369789123535 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9234 50.205 113.0 460780.0 25 0 42835.0 -1 LNWVDEMQVQL 11 70 695.8387947138173 1389.6630364944344 2 695.8397704958916 MULTI CID FTMS 0 0 0 9231 634028.3125 1.0 0 0.0 3 Oxidation (M) _LNWVDEM(Oxidation (M))QVQL_ ENSG00000151914|ENST00000680361|DST;ENST00000521104.1_1_6:56504020-56557947:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;nc|ENSG00000151914|Q03001-13|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-3|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST 29.84058131909904 0.3915366693542702 4 {[QV]|[N{I|L}]|[RA]|[KV]}NA 4 -1 54.737 0.0 0.0 3.9389 0.0 0.0 0.0 974.4335802778908 974.4335802778908 17.38585447024009 0.0 0.0 0.0 0 1.5 2.0 0.0 0.6549471895720984 {[QV]|[N{I|L}]|[RA]|[KV]}NA 3.9389 - 84 1 1.813 45881.1 1.0 4650 4582 9231 HBL1_DMSO_200M_050219_2,9234 HBL1_DMSO_200M_050219_2,9234,LNWVDEMQVQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9235 50.207 142.0 308570.0 25 0 24991.0 + 10825 FYYEQAPSA 9 84 538.2405873454987 1074.4666217577974 2 538.2399780154228 MULTI CID FTMS 0 0 0 9231 428993.875 0.6056432390975822 1 -0.1088333129882812 4 Unmodified _FYYEQAPSA_ ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000394455.6_1_14:68196461-68236507:-|nuORF;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-3|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 36.12702656103203 0.0967173616627612 4 {M(Oxidation (M))|F}APSA 5 4 36.115 0.0 0.0 3.3612 0.0 0.0 583.2624114079912 0.0 583.2624114079912 0.0 13.856223856496593 0.0 0.0 0 1.0 0.0 1.024227503252014 0.0 {M(Oxidation (M))|F}APSA 3.3612 - 303 + 1 1.813 40184.1 1.0 4651 4582 9231 HBL1_DMSO_200M_050219_2,9235 HBL1_DMSO_200M_050219_2,9235,FYYEQAPSA True True FYYEQAPSA 50.207399 538.239978015423 10265625.0 9231.0 ENST00000394455.6_1_14:68196461-68236507:-|nuORF;;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;;ENSG00000072121|ENST00000347230|ZFYVE26;;nc|ENSG00000072121|Q68DK2-5|ZFYVE26;;nc|ENSG00000072121|Q68DK2-3|ZFYVE26 8.30887238184611 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9236 50.212 249.0 247460.0 25 0 14056.0 + 29238 QGVVTTLENV 10 121 530.2879436073257 1058.5613342814513 2 530.2878295779228 MULTI CID FTMS 0 0 0 9231 271686.8125 0.1680766790407812 2 -0.1812095642089843 5 Unmodified _QGVVTTLENV_ ENSG00000115414|ENST00000354785|FN1;ENST00000492816.6_1_2:216226280-216244056:-|nuORF;nc|ENSG00000115414|P02751-1|FN1;nc|ENSG00000115414|P02751-10|FN1;nc|ENSG00000115414|P02751-11|FN1;nc|ENSG00000115414|P02751-12|FN1;nc|ENSG00000115414|P02751-13|FN1;nc|ENSG00000115414|P02751-14|FN1;nc|ENSG00000115414|P02751-17|FN1;nc|ENSG00000115414|P02751-3|FN1;nc|ENSG00000115414|P02751-4|FN1;nc|ENSG00000115414|P02751-5|FN1;nc|ENSG00000115414|P02751-6|FN1;nc|ENSG00000115414|P02751-7|FN1;nc|ENSG00000115414|P02751-8|FN1;nc|ENSG00000115414|P02751-9|FN1 41.95555342248728 0.1369168616057562 4 {[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}K{I|L}ENV 9 5 + 63.369 0.0 0.0 5.9863 5.9863 78.417 0.0 0.0 0.0 0.6986246702928867 27.21217778224478 0.6986246702928867 3.419837778218352 0 0.5 0.0 1.9049471895720984 0.4247425010840047 {[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}K{I|L}ENV;[AG]DT{I|L}K{I|L}ENV;{[QN]|[E{I|L}]|[KN]}TNK{I|L}ENV;[KG][{I|L}A]DT{I|L}ENV;{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}K{I|L}EGGV;{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}KE{I|L}NV;[KC]E{I|L}T[RP]NV;[AG][K{I|L}]DT{I|L}ENV;[AG]DT{I|L}K{I|L}EGGV;{[QN]|[E{I|L}]|[KN]}TNK{I|L}EGGV 5.9863;5.6632;5.5875;5.1808;5.1164;5.0163;4.9971;4.8468;4.7975;4.7177 -;-;-;-;-;-;-;-;-;- 1293 1 1.813 54654.0 1.0 4652 4582 9231 HBL1_DMSO_200M_050219_2,9236 HBL1_DMSO_200M_050219_2,9236,QGVVTTLENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9237 50.217 254.0 442140.0 25 0 44403.0 + + 31686 KIADEDALRRI 11 108 433.9177308684583 1298.731363205575 3 433.9173461794853 MULTI CID FTMS 0 0 0 9231 226294.390625 1.0 0 0.0 6 Unmodified _RRLHRFSQVT_ ENST00000493683.5_1_16:30773821-30780773:+|nuORF;ENSG00000103549|ENST00000324685|RNF40;nc|ENSG00000103549|O75150-4|RNF40;nc|ENSG00000103549|O75150-3|RNF40 8.444304893310646 0.6875766406947869 4 K{I|L}AD{I|L}[{I|L}P]N{I|L}CVT 12 -1 + 76.932 0.0 0.0 5.9236 5.9236 82.975 0.0 0.0 0.0 58.55975792006207 19.42979712652913 19.42979712652913 7.408711341027214 0 0.6237125054200234 0.8239087409443188 0.7658715643802767 0.3807196863200844 K{I|L}AD{I|L}[{I|L}P]N{I|L}CVT;K{I|L}{I|L}W[{I|L}P]N{I|L}CVT;K{I|L}W{I|L}[{I|L}P]N{I|L}CVT;K{I|L}AD{I|L}[{I|L}P]GG{I|L}CVT;K{I|L}{I|L}W[{I|L}P]GG{I|L}CVT;K{I|L}W{I|L}[{I|L}P]GG{I|L}CVT;K{I|L}{I|L}{[DA]|[EG]}[{I|L}P]N{I|L}CVT 5.9236;5.3531;5.3531;4.9299;4.6503;4.6503;4.6503 -;-;-;-;-;-;- 304 + 1 1.813 98739.6 1.0 4653 4582 9231 HBL1_DMSO_200M_050219_2,9237 HBL1_DMSO_200M_050219_2,9237,RRLHRFSQVT False False KIADEDALRRI 50.216757 433.917346179485 1642933.875 9231.0 ENST00000493683.5_1_16:30773821-30780773:+|nuORF;;ENSG00000103549|ENST00000324685|RNF40;;nc|ENSG00000103549|O75150-4|RNF40;;nc|ENSG00000103549|O75150-3|RNF40 3.3003897666931152 3.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9238 50.222 259.0 433730.0 25 0 54417.0 9231 FGRIIHTPF 9 111 363.2051376324482 1086.5935834975448 3 363.2047607302666 MULTI CID FTMS 0 0 0 9231 222269.015625 1.0 0 0.0 7 Unmodified _FGRIIHTPF_ ENSG00000144935|ENST00000476941|TRPC1;ENST00000480101.1_1_3:142499823-142503920:+|nuORF;nc|ENSG00000144935|P48995-2|TRPC1 7.608950283845883 0.6490595679007971 4 {I|L}E 2 8 20.969 0.0 0.0 1.9298 0.0 0.0 826.441636937632 0.0 826.441636937632 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}E 1.9298 - 71 1 1.813 96995.0 1.0 4654 4582 9231 HBL1_DMSO_200M_050219_2,9238 HBL1_DMSO_200M_050219_2,9238,FGRIIHTPF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9239 50.225 169.0 339240.0 25 0 28880.0 + 29163 FQTEVGKQL 9 109 525.7839740766697 1049.5533952201392 2 525.7848388552666 MULTI CID FTMS 0 0 0 9231 219945.671875 1.0 0 0.0 8 Unmodified _QFSWVALSL_ ENST00000498666.5_1_21:46314678-46340855:-|nuORF;ENSG00000160255|ENST00000652462|ITGB2 24.020572477871973 0.2255576514309169 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T[WR]{I|L}S{I|L} 8 3 + 22.483 0.0 0.0 2.1422 2.1422 70.039 0.0 0.0 0.0 1.3026088103996258 7.984550065040279 1.3026088103996258 6.196574120209903 0 0.4802046884880938 0.0 0.5 0.3807196863200844 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T[WR]{I|L}S{I|L};[AG]A{I|L}[WR]VM{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TPC(Carbamidomethyl (C))VVS{I|L};[AG]A{I|L}[{I|L}V][C(Carbamidomethyl (C))H]P{I|L};[{M(Oxidation (M))|F}V]{[WT]|[RM]}[Q{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[AG]A{I|L}[WR]{[YD]|[{M(Oxidation (M))|F}M]}V;[{M(Oxidation (M))|F}V]{[WT]|[RM]}[C(Carbamidomethyl (C))K]P{I|L};[AG]A{I|L}[{I|L}V]{[NV]|[RG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F};[AG]A{I|L}[{I|L}V][QT]M{M(Oxidation (M))|F} 2.1422;1.5518;1.2543;0.86891;0.82395;0.61064;0.55354;0.41431;0.33887 -;-;-;-;-;-;-;-;- 224 1 1.813 47955.2 1.0 4655 4582 9231 HBL1_DMSO_200M_050219_2,9239 HBL1_DMSO_200M_050219_2,9239,QFSWVALSL False False FQTEVGKQL 50.224859 525.784838855267 2575783.25 9231.0 ENST00000498666.5_1_21:46314678-46340855:-|nuORF;;ENSG00000160255|ENST00000652462|ITGB2 1.5319052934646606 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9240 50.239 800.0 370000.0 25 0 64781.0 + -1 RVLPAQATEYA 11 146 609.3257384324951 608.318461965895 1 609.3273803591728 MULTI CID FTMS 0 0 0 9231 203406.703125 0.5308293829760321 -2 0.191253662109375 9 ENST00000489417.5_1_7:127726971-127732107:+|nuORF;ENSG00000197157|ENST00000354725|SND1 4 [YG]{I|L}SAV 6 -1 + 69.063 0.0 0.0 11.353 11.353 96.203 0.0 0.0 0.0 17.293847850470726 12.24927773642787 12.24927773642787 12.24927773642787 0 1.4392404878284264 1.5228787452803376 0.8807196863200843 0.0 [YG]{I|L}SAV;[YG]{I|L}SG{I|L};{[SA]|[TG]}VYAV;{[TV]|[{I|L}S]}GYAV;{[VA]|[{I|L}G]}YSAV;[YG]{[SA]|[TG]}{I|L}V;[VS]{M(Oxidation (M))|F}SAV;{[SA]|[TG]}GY{I|L}V;{[SA]|[TG]}VYG{I|L};[YG]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 11.353;9.3395;8.4283;7.5788;6.9818;6.9509;6.5439;6.4795;6.4146;5.7541 -;-;-;-;-;-;-;-;-;- 447 1 1.813 216667.7 0.9100000262260436 4656 4582 9231 HBL1_DMSO_200M_050219_2,9240 HBL1_DMSO_200M_050219_2,9240, False False RVLPAQATEYA 50.238696 609.327380359173 989865.75 9231.0 ENST00000489417.5_1_7:127726971-127732107:+|nuORF;;ENSG00000197157|ENST00000354725|SND1 1.481728235880534 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9241 50.253 800.0 207020.0 25 0 20068.0 + 16984 KIWDPVHRV 9 160 575.3300240283174 1148.6454951234348 2 575.3301879763603 MULTI CID FTMS 0 0 0 9231 171538.0625 1.0 0 0.0 10 Unmodified _KIWDPVHRV_ ENSG00000134900|ENST00000376052|TPP2;nc|ENSG00000134900|P29144|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 46.0223103267499 0.0490911897871712 4 K{I|L}WDVPRHV 9 3 + 75.268 0.0 0.0 6.5527 6.5527 75.891 0.0 0.0 0.0 64.671765224348 3.4678748622465605 3.4678748622465605 0.9691001300805624 0 1.1989700043360187 0.744727494896694 0.0 1.4049471895720984 K{I|L}WDVPRHV;K{I|L}WDVPHRV;K{I|L}ADDV{M(Oxidation (M))|F}[KT]{I|L};K{I|L}ADDV{M(Oxidation (M))|F}[{I|L}T]K;K{I|L}WVDPRHV;K{I|L}WVDPHRV;K{I|L}[VS]DV{M(Oxidation (M))|F}[KT]{I|L};K{I|L}[VS]DV{M(Oxidation (M))|F}[{I|L}T]K;K{I|L}AD{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRP;K{I|L}AD{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PG]RV 6.5527;6.4684;5.6194;5.6081;5.1346;5.0502;4.7732;4.7619;4.5253;4.3226 -;-;-;-;-;-;-;-;-;- 1597 + 1 1.813 127251.2 0.8700000047683716 4657 4582 9231 HBL1_DMSO_200M_050219_2,9241 HBL1_DMSO_200M_050219_2,9241,KIWDPVHRV True True KIWDPVHRV 50.252542 575.33018797636 11869284.125 9231.0 nc|ENSG00000134900|P29144|TPP2;;ENSG00000134900|ENST00000376052|TPP2;;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 7.2717711130778 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9242 50.266 800.0 115980.0 25 0 8793.2 + 36420 SYWNHREL 8 119 552.7652119238373 1103.5158709144746 2 552.7651855349541 MULTI CID FTMS 0 0 0 9231 169296.421875 0.3982610336612523 2 -0.1812095642089843 11 Unmodified _SYWNHREL_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 24.99096001346401 0.5185035129578945 4 SYW[HN]{[RE]|[WV]}{I|L} 8 0 + 55.361 0.0 0.0 5.0168 5.0168 71.622 0.0 0.0 0.0 36.40978057358332 1.9836765376683367 1.9836765376683367 1.9836765376683367 0 0.4247425010840047 2.0 0.0 0.8494850021680094 + + SYW[HN]{[RE]|[WV]}{I|L};SYW[HN][W{I|L}]V;SYW[TA][WK]Y;SY{I|L}[MN][WK]Y;SY[YR]{[{M(Oxidation (M))|F}H]|[RQ]}[MT];SY[YR]A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NP;[{I|L}P]C(Carbamidomethyl (C))[PS]W{I|L}[MT];[{I|L}P]C(Carbamidomethyl (C))[PS]{I|L}W[MT];[QP][RN][TA]W[MT];[{I|L}P][CG][PS]{I|L}W[MT] 5.0168;4.837;4.545;4.1601;2.8004;2.0892;1.1449;1.1449;0.5063;0.31043 +;-;-;-;-;-;-;-;-;- + 243 + 1 1.813 74570.8 0.8600000143051147 4658 4582 9231 HBL1_DMSO_200M_050219_2,9242 HBL1_DMSO_200M_050219_2,9242,SYWNHREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9243 50.274 431.0 359160.0 25 0 20888.0 + 36545 TAKLWGPE 8 227 301.1643807797723 0 301.1645690798759 PEAK CID FTMS 0 0 0 9231 163867.484375 1.0 0 0.0 12 Unmodified _TAKLWGPE_ REV__ENSG00000165895|ENST00000298815|ARHGAP42 4.75600775471527 0.5825752635465162 4 Y 1 -1 2.4743 0.0 0.0 0.41216 0.0 0.0 299.1819892433352 135.04555689029533 434.22754613363054 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.41216 - 3 + 1 1.813 124651.7 1.0 4659 4582 9231 HBL1_DMSO_200M_050219_2,9243 HBL1_DMSO_200M_050219_2,9243,TAKLWGPE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9244 50.278 101.0 453440.0 25 0 29413.0 + 25224 MVAPVTGNDV 10 101 501.7496573438144 0 501.7513000369072 PEAK CID FTMS 0 0 0 9231 164326.734375 0.5007209261601545 -1 0.0911865234375 13 Unmodified _MVAPVTGNDV_ ENSG00000137575|ENST00000260130|SDCBP;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;ENST00000522843.5_1_8:59477592-59488665:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP 34.10243960390752 0.1735552622300722 4 PA 2 9 10.886 0.0 0.0 1.0869 0.0 0.0 603.2854342171227 227.08648096256096 830.3719151796836 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 PA 1.0869 - 97 + 1 1.813 39049.3 1.0 4660 4582 9231 HBL1_DMSO_200M_050219_2,9244 HBL1_DMSO_200M_050219_2,9244,MVAPVTGNDV False True MVAPVTGNDV 50.27765 501.751300036907 2589661.25 9231.0 nc|ENSG00000137575|O00560-2|SDCBP;;ENSG00000137575|ENST00000260130|SDCBP;;ENST00000522843.5_1_8:59477592-59488665:+|nuORF;;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;;nc|ENSG00000137575|O00560-3|SDCBP 2.570671796798706 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9245 50.291 800.0 138340.0 25 0 8062.8 -1 KMYQEEIQEWY 11 115 781.8479583277515 1561.6813637223029 2 781.8468505740166 MULTI CID FTMS 0 0 0 9231 151603.03125 1.0 0 0.0 14 Oxidation (M) _KM(Oxidation (M))YQEEIQEWY_ ENSG00000186815|ENST00000335509|TPCN1;ENST00000551127.5_1_12:113730719-113733878:+|nuORF;ENST00000552077.5_1_12:113726380-113733878:+|nuORF;nc|ENSG00000186815|Q9ULQ1-3|TPCN1 2.9952420565917617 0.861016188266951 4 {[QN]|[E{I|L}]|[KN]}AGAM[YG]QQNA{M(Oxidation (M))|F}Y 14 -1 + 64.329 0.0 0.0 4.1192 4.1192 67.26 0.0 0.0 0.0 1.575994759290971 8.891518310134835 1.575994759290971 1.575994759290971 0 0.6989700043360187 0.0 0.3494850021680094 2.8807196863200843 {[QN]|[E{I|L}]|[KN]}AGAM[YG]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGAM[YG]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQM[YG]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQM[YG]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQAM[YG]QQNA{M(Oxidation (M))|F}Y;{[HG]|PP}[WP]DEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QGAM[YG]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}QAM[YG]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[CS][KA]AQQNA{M(Oxidation (M))|F}Y 4.1192;4.0183;3.9823;3.8799;3.8529;3.7827;3.7574;3.7353;3.6612;3.6574 -;-;-;-;-;-;-;-;-;- 3432 1 1.813 84593.1 0.6899999976158142 4661 4582 9231 HBL1_DMSO_200M_050219_2,9245 HBL1_DMSO_200M_050219_2,9245,KMYQEEIQEWY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9246 50.305 800.0 196900.0 25 0 18954.0 33448 SIDLREKM 8 183 496.2651739870845 990.515795040969 2 496.2664062380791 MULTI CID FTMS 0 0 0 9231 112955.1015625 1.0 0 0.0 15 Unmodified _SIDLREKM_ ENSG00000150773|ENST00000280350|PIH1D2;nc|ENSG00000150773|Q8WWB5-2|PIH1D2;nc|ENSG00000150773|Q8WWB5-3|PIH1D2 36.12702656103203 0.299085846329477 4 {[TV]|[{I|L}S]}D{I|L}S{I|L}C(Carbamidomethyl (C))A{I|L} 9 5 + 55.077 0.0 0.0 5.5604 5.5604 74.886 0.0 0.0 0.0 18.59192417949768 2.552725051033057 2.552725051033057 2.552725051033057 0 0.5 2.0 0.5796896906561032 0.0 {[TV]|[{I|L}S]}D{I|L}S{I|L}C(Carbamidomethyl (C))A{I|L};{[TV]|[{I|L}S]}D{I|L}S{I|L}C(Carbamidomethyl (C)){I|L}A;{[TV]|[{I|L}S]}D{I|L}S{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}T;{[TV]|[{I|L}S]}D{I|L}S{I|L}[MN]V;{[TV]|[{I|L}S]}D{I|L}S{I|L}[CG]A{I|L};{[TV]|[{I|L}S]}D{I|L}R{[WT]|[RM]}T;{[TV]|[{I|L}S]}D{I|L}R{[DS]|[MA]|[CV]|TT}SV;{[TV]|[{I|L}S]}D{I|L}S{I|L}[CG]{I|L}A;{[TV]|[{I|L}S]}D{I|L}S{I|L}{[NV]|[RG]}M;{[TV]|[{I|L}S]}D{I|L}S[Q{I|L}]C{I|L} 5.5604;5.3027;4.8585;4.8197;4.6308;4.5084;4.4009;4.3731;4.338;4.3269 -;-;-;-;-;-;-;-;-;- 1621 + 1 1.813 121410.0 0.6200000047683716 4662 4582 9231 HBL1_DMSO_200M_050219_2,9246 HBL1_DMSO_200M_050219_2,9246,SIDLREKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9248 50.31 4.3 14804000.0 25 0 4244300.0 + 5041 DGYAVDRAI 9 66 490.2457798726577 978.4770068121154 2 490.2460815310478 MULTI CID FTMS 0 0 0 9247 15113752.0 1.0 0 0.0 1 Unmodified _DGYAVDRAI_ ENSG00000104824|ENST00000221419|HNRNPL;ENST00000595164.5_1_19:39327364-39331218:-|nuORF;ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;ENST00000601664.1_1_19:39329532-39330816:-|nuORF;nc|ENSG00000104824|P14866-2|HNRNPL 26.268140514670165 0.1969607489560049 4 [YG]DA 4 5 33.474 0.0 0.0 3.421 0.0 0.0 0.0 569.3055645115872 569.3055645115872 21.879938467179727 0.0 0.0 0.0 0 1.0 1.3979400086720375 0.3252574989159953 0.0 [YG]DA 3.421 - 57 1 1.808 53125.3 1.0 4663 4583 9247 HBL1_DMSO_200M_050219_2,9248 HBL1_DMSO_200M_050219_2,9248,DGYAVDRAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9249 50.311 4.8 12497000.0 25 0 1780800.0 + 6147 DSYTPKVI 8 74 461.7478237351223 921.4810945370448 2 461.7479736208916 MULTI CID FTMS 0 0 0 9247 14262803.0 0.7767596383952315 -2 0.2000198364257812 2 Unmodified _DSYTPKVI_ ENSG00000133872|ENST00000256255|SARAF;ENST00000517569.1_1_8:29931365-29940465:-|nuORF 30.22481116460888 0.4082965392918993 4 [W{M(Oxidation (M))|F}]YTVPG 7 6 28.492 0.0 0.0 3.092 0.0 0.0 0.0 68.05137048892811 68.05137048892811 5.6119790752951815 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 [W{M(Oxidation (M))|F}]YTVPG 3.092 - 116 + 1 1.808 54396.6 1.0 4664 4583 9247 HBL1_DMSO_200M_050219_2,9249 HBL1_DMSO_200M_050219_2,9249,DSYTPKVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9250 50.312 16.0 4238600.0 25 0 631090.0 + 22028 IPPPPPPAM 9 80 458.751710776598 915.488868619996 2 458.7522155642509 MULTI CID FTMS 0 0 0 9247 3449465.25 0.7799143521287162 3 -0.1550788879394531 3 Unmodified _LPPPPPPAM_ ENST00000468653.5_1_3:160117521-160130242:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP 6 3 46.7 0.0 0.0 5.1011 0.0 0.0 0.0 314.1171850552492 314.1171850552492 12.464081216230902 0.0 0.0 0.0 0 1.305462187404089 1.5228787452803376 0.0 0.0 + [{I|L}P]PPPP 5.1011 + + 293 1 1.808 57999.3 1.0 4665 4583 9247 HBL1_DMSO_200M_050219_2,9250 HBL1_DMSO_200M_050219_2,9250,LPPPPPPAM True True IPPPPPPAM 50.312065 458.752215564251 1070161048.0 9247.0 ENST00000468653.5_1_3:160117521-160130242:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 5.96528975168864 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9251 50.313 30.0 1499200.0 25 0 240380.0 + 18512 KYQAQDNFM 9 71 572.7580017003875 1143.5014504675748 2 572.7585937380791 MULTI CID FTMS 0 0 0 9247 1836084.25 1.0 0 0.0 4 Unmodified _KYQAQDNFM_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 39.94969957227396 0.0757326808254658 4 [YK]QAQDN{M(Oxidation (M))|F}M 9 0 + 67.145 0.0 0.0 5.8719 5.8719 73.798 0.0 0.0 0.0 1.249387366082999 13.920365321768529 1.249387366082999 1.249387366082999 0 0.9247425010840048 0.0 0.0 0.805462187404089 + + [YK]QAQDN{M(Oxidation (M))|F}M;[YQ]KAQDN{M(Oxidation (M))|F}M;[YK]QAQDGG{M(Oxidation (M))|F}M;[YK]QA[AG]DN{M(Oxidation (M))|F}M;[YK][AG]AQDN{M(Oxidation (M))|F}M;[YQ]KAQDGG{M(Oxidation (M))|F}M;[YQ]KA[AG]DN{M(Oxidation (M))|F}M;[YQ]AKQDN{M(Oxidation (M))|F}M;[QA]YKQDN{M(Oxidation (M))|F}M;[YK]QA[AG]DGG{M(Oxidation (M))|F}M 5.8719;5.7626;5.0666;5.0666;5.0666;4.9574;4.9574;4.9281;4.9281;4.2652 +;-;-;-;-;-;-;-;-;- + 391 1 1.808 39087.2 1.0 4666 4583 9247 HBL1_DMSO_200M_050219_2,9251 HBL1_DMSO_200M_050219_2,9251,KYQAQDNFM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9252 50.314 34.0 1790500.0 25 0 170060.0 + 21032 LPAADVKNI 9 85 470.7769749218427 939.5393969104854 2 470.7769042849541 MULTI CID FTMS 0 0 0 9247 1693783.0 0.0991216254096606 -8 0.7435226440429688 5 Unmodified _LPAADVKNI_ ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF 51.629811660486645 0.0367964933207742 4 {I|L}PAADVKN{I|L} 9 0 + 86.583 0.0 0.0 9.2155 9.2155 86.78 0.0 0.0 0.0 36.47817481888637 3.679767852945943 3.679767852945943 3.679767852945943 0 1.031234684152075 2.0 0.0 0.75 + + {I|L}PAADVKN{I|L};{I|L}PAADVK{I|L}N;{I|L}PAADVKGG{I|L} 9.2155;8.8238;7.8892 +;-;- + 397 + 1 1.808 51532.0 1.0 4667 4583 9247 HBL1_DMSO_200M_050219_2,9252 HBL1_DMSO_200M_050219_2,9252,LPAADVKNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9253 50.316 53.0 1285500.0 25 0 122280.0 27561 PLAPMEPLL 9 83 498.7771091138352 995.5396652944704 2 498.7770568728447 MULTI CID FTMS 0 0 0 9247 1179472.5 0.2599721022160521 -7 0.6131134033203125 6 Oxidation (M) _PLAPM(Oxidation (M))EPLL_ ENSG00000137877|ENST00000320955|SPTBN5 46.92087301778293 0.0471210510596396 4 [{I|L}P]WEEP{I|L}{I|L} 8 3 + 67.656 0.0 0.0 6.7959 6.7959 92.009 0.0 0.0 0.0 17.623569832004122 14.904630595263413 14.904630595263413 17.623569832004122 0 1.25 2.0 0.3252574989159953 0.0 [{I|L}P]WEEP{I|L}{I|L};[TP][RN]GEP{I|L}{I|L};[EP][W{I|L}]EP{I|L}{I|L};[TP][QP][KC]P{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[WP]EP{I|L}{I|L} 6.7959;5.0257;4.8408;4.0494;3.5083 -;-;-;-;- 297 1 1.808 55375.2 1.0 4668 4583 9247 HBL1_DMSO_200M_050219_2,9253 HBL1_DMSO_200M_050219_2,9253,PLAPMEPLL True False TPRNGEPLI 50.315788 498.777056872845 108568640.0 9247.0 ENSG00000148606|ENST00000372371|POLR3A 2.2069802284240723 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9254 50.317 65.0 882400.0 25 0 197750.0 + 36227 SVYPPPPEK 9 74 507.2705188374884 1012.5264847417768 2 507.2707397341728 MULTI CID FTMS 0 0 0 9247 824544.75 0.0399258233473349 5 -0.1896743774414062 7 Unmodified _SVYPPPPEK_ REV__ENSG00000104341|ENST00000521545|LAPTM4B;REV__nc|ENSG00000104341|Q86VI4|LAPTM4B 18.1463463914782 0.3454829746528889 4 [VS]YMATT{I|L}K 9 -1 + 77.674 0.0 0.0 7.6713 7.6713 96.848 0.0 0.0 0.0 53.49275660196689 13.020921144672926 13.020921144672926 77.6739689820571 0 0.805462187404089 2.0 0.4247425010840047 0.1549471895720985 [VS]YMATT{I|L}K 7.6713 - 76 + 1 1.808 49963.0 1.0 4669 4583 9247 HBL1_DMSO_200M_050219_2,9254 HBL1_DMSO_200M_050219_2,9254,SVYPPPPEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9255 50.319 55.0 1198900.0 25 0 145620.0 + 6488 EAIERVGV 8 93 436.7458444822645 871.4771360313291 2 436.7456237673759 MULTI CID FTMS 0 0 0 9247 807231.0625 1.0 0 0.0 8 Unmodified _EAIERVGV_ REV__ENSG00000163141|ENST00000368931|BNIPL 50.855029805455786 0.1352255786796883 4 {[CP]|[EA]}{I|L}EAAR{I|L} 8 -1 + 36.826 0.0 0.0 4.2258 4.2258 79.645 0.0 0.0 0.0 23.33159862926232 5.425523506854631 5.425523506854631 9.967948601247876 0 0.6747425010840047 0.0 0.4247425010840047 0.0 {[CP]|[EA]}{I|L}EAAR{I|L};{[CP]|[EA]}{I|L}E[RV]GV;{[CP]|[EA]}{I|L}{I|L}[RD]GV;{[CP]|[EA]}{I|L}{I|L}[WQ]{I|L} 4.2258;3.082;2.885;1.7967 -;+;-;- + 205 + 1 1.808 57055.0 1.0 4670 4583 9247 HBL1_DMSO_200M_050219_2,9255 HBL1_DMSO_200M_050219_2,9255,EAIERVGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9256 50.321 94.0 972290.0 25 0 147640.0 + 39910 VFPTRTARF 9 82 365.54205293986325 1093.6043294197898 3 365.5416442751884 MULTI CID FTMS 0 0 0 9247 627696.375 0.6041569840293783 3 -0.1550788879394531 9 Unmodified _VFPTRTARF_ ENSG00000213339|ENST00000250237|QTRT1 29.081581746732265 0.1611639662936252 4 V{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 6 30.005 0.0 0.0 2.7437 0.0 0.0 0.0 697.3760641303501 697.3760641303501 17.78659694992122 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 V{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.7437 - 30 + 1 1.808 85593.8 1.0 4671 4583 9247 HBL1_DMSO_200M_050219_2,9256 HBL1_DMSO_200M_050219_2,9256,VFPTRTARF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9257 50.324 175.0 451720.0 25 0 38631.0 + 3691 DAFGKGKQLTV 11 121 582.324672670929 1162.634792408658 2 582.3251830935478 MULTI CID FTMS 0 0 0 9247 546186.75 0.9117835905438136 -1 0.1088333129882812 10 Unmodified _DAFGKGKQLTV_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 66.61675797227278 0.0422914471598608 4 V{M(Oxidation (M))|F}SGKRRKW 9 8 + 58.704 0.0 0.0 5.0492 5.0492 68.818 0.0 0.0 0.0 29.834751053096973 0.0314789003820337 0.0314789003820337 0.4968123769230459 0 1.0 2.0 0.0 0.0 V{M(Oxidation (M))|F}SGKRRKW;V{M(Oxidation (M))|F}SANRRKW;V{M(Oxidation (M))|F}SGK[RK]RW;V{M(Oxidation (M))|F}SAN[RK]RW;V{M(Oxidation (M))|F}GTNRRKW;V{M(Oxidation (M))|F}SAGGRRKW;V{M(Oxidation (M))|F}GTN[RK]RW;{[DA]|[EG]}{M(Oxidation (M))|F}GKRRKW;V{M(Oxidation (M))|F}SAGG[RK]RW;W{M(Oxidation (M))|F}GK[RK]AATV 5.0492;5.0065;4.8296;4.7869;4.3175;4.2144;4.0979;4.0228;3.9949;3.874 -;-;-;-;-;-;-;-;-;- 911 + 1 1.808 62198.4 1.0 4672 4583 9247 HBL1_DMSO_200M_050219_2,9257 HBL1_DMSO_200M_050219_2,9257,DAFGKGKQLTV True True DAFGKGKQLTV 50.324223 582.325183093548 5230015.0625 9247.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 6.463815212249756 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9258 50.328 190.0 686120.0 25 0 173050.0 16057 ITLHYARLG 9 96 522.3031975025034 1042.5918420718067 2 522.3033935427666 MULTI CID FTMS 0 0 0 9247 484695.96875 0.4022718704469637 -4 0.3389205932617187 11 Unmodified _ITLHYARLG_ ENSG00000049769|ENST00000055335|PPP1R3F;nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F 14.838274106304384 0.4350285940865338 4 {I|L}T 2 7 36.454 0.0 0.0 3.4964 0.0 0.0 0.0 825.4303290312859 825.4303290312859 5.898476916622531 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {I|L}T 3.4964 + + 68 + 1 1.808 104918.7 1.0 4673 4583 9247 HBL1_DMSO_200M_050219_2,9258 HBL1_DMSO_200M_050219_2,9258,ITLHYARLG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9259 50.332 224.0 431370.0 25 0 53315.0 + 5961 DQLCISFHHFP 11 88 672.3141554862992 1342.6137580393984 2 672.3148681521416 MULTI CID FTMS 0 0 0 9247 446117.34375 0.7820207838353596 -4 0.3389205932617187 12 Unmodified _DQLCISFHHFP_ REV__ENST00000556103.1_1_14:23946657-23947232:+|nuORF 20.41453444215458 0.6105011870913812 4 [PS]TAS{M(Oxidation (M))|F}SQ{I|L} 9 -1 45.384 0.0 0.0 3.3803 0.0 0.0 0.0 421.1463257486359 421.1463257486359 8.177959224778135 0.0 0.0 0.0 0 0.0 0.0 2.579689690656103 0.0 [PS]TAS{M(Oxidation (M))|F}SQ{I|L} 3.3803 - 490 1 1.808 75727.9 1.0 4674 4583 9247 HBL1_DMSO_200M_050219_2,9259 HBL1_DMSO_200M_050219_2,9259,DQLCISFHHFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9260 50.335 147.0 1004800.0 25 0 100480.0 26907 PDLVIHPPR 9 118 348.5384366082079 1042.5934804248238 3 348.5379516482353 MULTI CID FTMS 0 0 0 9247 429858.84375 0.291790110090208 -6 0.5338668823242188 13 Unmodified _PDLVIHPPR_ AluSg_dup35978|chr22:21630283-21630588:+|1.0585618963741046|0.2892960562738399|1.87|48.0|11|1|anti-sense;AluY_dup65734|chr11:44619481-44619789:+|1.5335058333898055|0.0057506542606521|8.06|48.0|22|3|anti-sense 11.640296217721598 0.521594087909532 4 DPYRPV 6 7 55.277 0.0 0.0 5.3019 0.0 0.0 0.0 312.2050875299438 312.2050875299438 40.58410591334856 0.0 0.0 0.0 0 0.2396518287104437 1.6989700043360187 0.0 0.0 DPYRPV 5.3019 - 124 + 1 1.808 133428.0 1.0 4675 4583 9247 HBL1_DMSO_200M_050219_2,9260 HBL1_DMSO_200M_050219_2,9260,PDLVIHPPR False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 9261 50.337 96.0 698190.0 25 0 56470.0 -1 LPPPPPPAM 9 113 466.7492067760757 931.4838606189514 2 466.7494689822197 MULTI CID FTMS 0 0 0 9247 377534.15625 0.5413138326238791 8 -0.2830619812011719 14 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPPPA{M(Oxidation (M))|F} 9 -1 [{I|L}P]PP + + 39.068 17.88 4.4232 4.1942 4.1942 49.34 0.0 0.0 0.0 0.0 11.940745975737885 0.0 0.0 0 1.110924374808178 0.0 0.0 0.0 [{I|L}P]PPPPPA{M(Oxidation (M))|F} 4.1942 + + 377 + 1 1.808 58552.6 1.0 4676 4583 9247 HBL1_DMSO_200M_050219_2,9261 HBL1_DMSO_200M_050219_2,9261,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9262 50.342 273.0 402550.0 25 0 51233.0 + 12894 GVYNGKTFNQV 11 111 613.8117878504769 1225.6090227677537 2 613.8125488162041 MULTI CID FTMS 0 0 0 9247 325212.53125 0.3506788513526582 -5 0.3920822143554687 15 Unmodified _GVYNGKTFNQV_ ENSG00000115268|ENST00000592588|RPS15;ENST00000522454.1_1_5:164028010-164028223:-|nuORF 87.25819977447905 0.0022587470437062 4 [VG]YN 4 7 49.737 0.0 0.0 4.0582 0.0 0.0 0.0 789.3911064259979 789.3911064259979 11.32400313046481 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.8494850021680094 + [VG]YN 4.0582 + + 2087 + 1 1.808 83253.3 1.0 4677 4583 9247 HBL1_DMSO_200M_050219_2,9262 HBL1_DMSO_200M_050219_2,9262,GVYNGKTFNQV True True GVYNGKTFNQV 50.342196 613.812548816204 13561388.0 9247.0 ENSG00000115268|ENST00000592588|RPS15;;ENST00000522454.1_1_5:164028010-164028223:-|nuORF 7.627663771311442 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9263 50.346 201.0 399510.0 25 0 47786.0 + 25743 NIPDEELKRV 10 77 404.8908665220804 1211.6507701664411 3 404.8912536501884 MULTI CID FTMS 0 0 0 9247 297448.59375 0.6382790605134783 -2 0.2000198364257812 16 Unmodified _NIPDEELKRV_ ENSG00000087053|ENST00000346299|MTMR2;nc|ENSG00000087053|Q13614-2|MTMR2 33.4449034751529 0.2267874087365337 4 {[QV]|[N{I|L}]|[RA]|[KV]}PDEE{I|L}K[RV] 10 0 + 78.02 0.0 0.0 6.4392 6.4392 92.107 0.0 0.0 0.0 55.66946789630613 7.269987279362624 7.269987279362624 35.728050365394424 0 0.3054621874040891 2.0 0.4247425010840047 0.2302046884880938 + + {[QV]|[N{I|L}]|[RA]|[KV]}PDEE{I|L}K[RV];{[QV]|[N{I|L}]|[RA]|[KV]}P[WQ][DG]K[RV];{[QV]|[N{I|L}]|[RA]|[KV]}P[WE][NG]K[RV];{[QV]|[N{I|L}]|[RA]|[KV]}PDV[R{I|L}]AAP{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}P[WE][W{I|L}][RV];{[QV]|[N{I|L}]|[RA]|[KV]}PVD[R{I|L}]AAP{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}VPD[R{I|L}]AAP{M(Oxidation (M))|F} 6.4392;3.4905;3.242;2.8494;2.5129;2.4556;2.2072 +;-;-;-;-;-;- + 281 + 1 1.808 68319.1 1.0 4678 4583 9247 HBL1_DMSO_200M_050219_2,9263 HBL1_DMSO_200M_050219_2,9263,NIPDEELKRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9264 50.352 338.0 263780.0 25 0 36961.0 + 12765 GVPGHKKA 8 123 397.2377137451525 792.4608745571051 2 397.2376891970634 MULTI CID FTMS 0 0 0 9247 223278.1875 0.3241179153973953 2 -0.108551025390625 17 Unmodified _GVPGHKKA_ REV__ENSG00000116771|ENST00000375826|AGMAT 0.7936320650641473 0.8195151834710337 4 {I|L}{I|L}HR 4 -1 42.805 0.0 0.0 5.4015 0.0 0.0 255.1213044573846 0.0 255.1213044573846 0.0 29.31031895404267 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.2614393726401688 {I|L}{I|L}HR 5.4015 - 40 + 1 1.808 75198.6 1.0 4679 4583 9247 HBL1_DMSO_200M_050219_2,9264 HBL1_DMSO_200M_050219_2,9264,GVPGHKKA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9265 50.366 800.0 326890.0 25 0 56933.0 + -1 MQITTKCQSNW 11 132 699.3137539833486 1396.6129550334972 2 699.3134643435478 MULTI CID FTMS 0 0 0 9247 215759.78125 0.2262869618603143 -7 0.6131134033203125 18 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))QITTKCQSNW_ REV__ENST00000457674.7_1_19:9801678-9801756:-|nuORF 7.608950283845883 0.8392484121837455 4 [TP]TTMT{I|L}S 8 -1 41.043 0.0 0.0 2.9387 0.0 0.0 0.0 561.1936450791613 561.1936450791613 2.8251224547236475 0.0 0.0 0.0 0 0.0 0.619788758288394 2.801203852579394 0.0 [TP]TTMT{I|L}S 2.9387 - 4102 1 1.808 185662.4 0.9100000262260436 4680 4583 9247 HBL1_DMSO_200M_050219_2,9265 HBL1_DMSO_200M_050219_2,9265,MQITTKCQSNW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9266 50.37 236.0 302220.0 25 0 30029.0 + 44855 YPPGVKEI 8 90 451.7527688641812 901.4909847951624 2 451.7526733279228 MULTI CID FTMS 0 0 0 9247 218543.328125 0.3981800822347594 29 -2.246929168701172 19 Unmodified _YPPGVKEI_ ENSG00000083642|ENST00000315596|PDS5B;ENSG00000121892|ENST00000303538|PDS5A;ENST00000466078.1_1_13:33222909-33223050:+|nuORF;ENST00000493653.1_1_13:33222909-33226198:+|nuORF;ENST00000498550.5_1_13:33222909-33262824:+|nuORF;ENST00000506262.1_1_4:39978008-39978209:-|nuORF;nc|ENSG00000083642|Q9NTI5-2|PDS5B;nc|ENSG00000083642|Q9NTI5-3|PDS5B;nc|ENSG00000083642|Q9NTI5-4|PDS5B;nc|ENSG00000121892|Q29RF7-3|PDS5A 19.256988751693697 0.6264283240490721 4 YPPR 4 5 52.735 0.0 0.0 5.8498 0.0 0.0 0.0 385.20896326236567 385.20896326236567 33.042359562158126 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 YPPR 5.8498 - 216 + 1 1.808 59861.3 1.0 4681 4583 9247 HBL1_DMSO_200M_050219_2,9266 HBL1_DMSO_200M_050219_2,9266,YPPGVKEI False True YPPGVKEI 50.370396 451.752673327923 58086216.0 9247.0 ENSG00000121892|ENST00000303538|PDS5A;;nc|ENSG00000083642|Q9NTI5-2|PDS5B;;nc|ENSG00000083642|Q9NTI5-3|PDS5B;;ENSG00000083642|ENST00000315596|PDS5B;;ENST00000493653.1_1_13:33222909-33226198:+|nuORF;;ENST00000466078.1_1_13:33222909-33223050:+|nuORF;;ENST00000498550.5_1_13:33222909-33262824:+|nuORF;;ENST00000506262.1_1_4:39978008-39978209:-|nuORF;;nc|ENSG00000083642|Q9NTI5-4|PDS5B;;nc|ENSG00000121892|Q29RF7-3|PDS5A 3.3001648585001626 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9267 50.378 343.0 455640.0 25 0 31732.0 + 32632 SAYLTQQV 8 139 455.2377974318494 908.4610419304988 2 455.2379943728447 MULTI CID FTMS 0 0 0 9247 198675.8125 0.2234396733975941 -4 0.3389205932617187 20 Unmodified _SAYLTQQV_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA;nc|ENSG00000115970|Q6YHU6-6|THADA 38.15118350030904 0.2652218139009398 4 {[SA]|[TG]}Y{I|L}AQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 2 + 33.119 0.0 0.0 3.6456 3.6456 77.35 0.0 0.0 0.0 14.511690783936562 1.5153188704894696 1.5153188704894696 9.262137858390815 0 0.0 1.6989700043360187 0.3556270500406937 0.0 {[SA]|[TG]}Y{I|L}AQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}Y{I|L}A[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}A[Y{I|L}]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}AQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[Y{I|L}]TGAQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[Y{I|L}]TQQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[AG]T[Y{I|L}]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}A[Y{I|L}][AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}A[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[Y{I|L}]TGA[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.6456;2.6261;2.2008;2.0482;1.863;1.8202;1.3781;1.1812;1.0287;0.84348 -;-;-;-;-;-;-;-;-;- 635 1 1.808 124632.9 1.0 4682 4583 9247 HBL1_DMSO_200M_050219_2,9267 HBL1_DMSO_200M_050219_2,9267,SAYLTQQV False True SAYLTQQV 50.377769 455.237994372845 13079086.0 9247.0 ENSG00000115970|ENST00000405975|THADA;;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;;nc|ENSG00000115970|Q6YHU6-2|THADA;;nc|ENSG00000115970|Q6YHU6-6|THADA;;nc|ENSG00000115970|Q6YHU6-5|THADA;;nc|ENSG00000115970|Q6YHU6-3|THADA 6.181883017222087 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9269 50.382 35.0 2020600.0 25 0 411950.0 + 21275 LPEDKPRLI 9 67 540.824583029168 1079.634613125136 2 540.8246337771416 MULTI CID FTMS 0 0 0 9268 1708458.75 0.9148627622520974 1 -0.0361747741699218 1 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 32.78568957990786 0.1150597335874693 4 {I|L}PEDK 5 4 74.196 0.0 0.0 6.8723 0.0 0.0 0.0 494.3109055984606 494.3109055984606 39.75895023531386 0.0 0.0 0.0 0 1.1989700043360187 2.0 0.4247425010840047 0.0 + {I|L}PEDK 6.8723 + + 48 + 1 1.808 64712.9 1.0 4683 4584 9268 HBL1_DMSO_200M_050219_2,9269 HBL1_DMSO_200M_050219_2,9269,LPEDKPRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9270 50.383 34.0 854340.0 25 0 73726.0 + 4280 DAQTQIQNI 9 74 515.7619246704228 1029.5092964076457 2 515.7624389529228 MULTI CID FTMS 0 0 0 9268 899362.0625 0.162441101553903 3 -0.1007728576660156 2 Unmodified _DAQTQIQNI_ ENSG00000100934|ENST00000307712|SEC23A;nc|ENSG00000100934|Q15436-2|SEC23A 43.85829265575387 0.0542763391141878 4 {[DA]|[EG]}QTQ 5 4 30.035 0.0 0.0 2.9174 0.0 0.0 0.0 483.25542612860175 483.25542612860175 13.849068244933918 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.2614393726401687 0.0 + {[DA]|[EG]}QTQ 2.9174 + + 110 1 1.808 28135.7 1.0 4684 4584 9268 HBL1_DMSO_200M_050219_2,9270 HBL1_DMSO_200M_050219_2,9270,DAQTQIQNI True True DAQTQIQNI 50.383262 515.762438952923 81524680.0 9268.0 nc|ENSG00000100934|Q15436-2|SEC23A;;ENSG00000100934|ENST00000307712|SEC23A 6.288331826527913 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9271 50.385 87.0 829660.0 25 0 102820.0 + 13035 HATIIPKV 8 72 439.7765933106262 877.5386336880524 2 439.7766296267509 MULTI CID FTMS 0 0 0 9268 882324.75 0.6816183171962426 2 -0.08270263671875 3 Unmodified _HATIIPKV_ ENSG00000105568|ENST00000322088|PPP2R1A 63.562846038646086 0.116059504757595 4 [HA]T{I|L}{I|L} 5 3 51.172 0.0 0.0 5.8313 0.0 0.0 0.0 339.2034874200787 339.2034874200787 38.77636252551653 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 1.174742501084005 0.0 + [HA]T{I|L}{I|L} 5.8313 + + 67 1 1.808 64316.0 1.0 4685 4584 9268 HBL1_DMSO_200M_050219_2,9271 HBL1_DMSO_200M_050219_2,9271,HATIIPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9272 50.388 159.0 428320.0 25 0 57558.0 + 18184 KVADGFKVV 9 100 481.787429112387 961.560305291574 2 481.7874938845634 MULTI CID FTMS 0 0 0 9268 323407.71875 0.6495142911637148 -2 0.1812095642089843 4 Unmodified _KVADGFKVV_ ENSG00000163655|ENST00000496455|GMPS;nc|ENSG00000163655|P49915-2|GMPS 56.17704186161178 0.0281986971544335 4 [{M(Oxidation (M))|F}T]N[{I|L}A]AKVV 9 6 + 42.444 0.0 0.0 4.4141 4.4141 69.764 0.0 0.0 0.0 1.5841654116560733 32.22743112049912 1.5841654116560733 2.2577249674798594 0 1.079689690656103 0.0 1.055462187404089 0.0 [{M(Oxidation (M))|F}T]N[{I|L}A]AKVV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VG]DAKVV;[{M(Oxidation (M))|F}T]N[{I|L}A]AVKV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VG]DAVKV;[{M(Oxidation (M))|F}T]GG[{I|L}A]AKVV;[{M(Oxidation (M))|F}T]GG[{I|L}A]AVKV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WK]RVV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VG]{[VA]|[{I|L}G]}DKV;[{I|L}P][YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KV;AA[YG][{I|L}A]AKVV 4.4141;4.1793;3.8222;3.5874;3.4564;2.8646;2.5273;2.2104;1.9685;1.2968 -;-;-;-;-;-;-;-;-;- 659 1 1.808 56435.3 1.0 4686 4584 9268 HBL1_DMSO_200M_050219_2,9272 HBL1_DMSO_200M_050219_2,9272,KVADGFKVV True True KVADGFKVV 50.38831 481.787493884563 3194958.75 9268.0 nc|ENSG00000163655|P49915-2|GMPS;;ENSG00000163655|ENST00000496455|GMPS 0.7301870385805765 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9273 50.394 329.0 183270.0 25 0 15434.0 + 44576 YPFHKQPPTYV 11 93 688.8534785406637 1375.6924041481273 2 688.8546630740166 MULTI CID FTMS 0 0 0 9268 194533.875 0.8231690191131317 -3 0.2723960876464844 5 Unmodified _YPFHKQPPTYV_ ENSG00000100258|ENST00000474879|LMF2;ENST00000504717.1_1_22:50941822-50943237:-|nuORF;nc|ENSG00000100258|Q9BU23-2|LMF2;nc|ENSG00000100258|Q9BU23-3|LMF2 67.08073823543168 0.0408645806987127 4 YP{M(Oxidation (M))|F}HKQP[TP]YV 11 0 + 78.505 0.0 0.0 5.7066 5.7066 85.972 0.0 0.0 0.0 71.5151964115703 7.30585029054906 7.30585029054906 10.53660125269677 0 2.9489700043360187 1.6989700043360187 0.0 0.0 + + YP{M(Oxidation (M))|F}HKQP[TP]YV;YP{M(Oxidation (M))|F}APQKH{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};YP{M(Oxidation (M))|F}HKY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YV;YP{M(Oxidation (M))|F}AP[AG]KH{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}HKQ[WK]{[QD]|[EN]|[WG]|[KD]|[RS]};YP{M(Oxidation (M))|F}[PA]QPP{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]};YP{M(Oxidation (M))|F}HKQP{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}HK[AG][WK]{[QD]|[EN]|[WG]|[KD]|[RS]};YP{M(Oxidation (M))|F}APQ{M(Oxidation (M))|F}[HK]{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YHKQPA{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 5.7066;4.9407;4.5762;4.2771;4.2735;4.0954;4.0268;3.6073;3.5127;3.4864 +;-;-;-;-;-;-;-;-;- + 767 + 1 1.808 47982.0 1.0 4687 4584 9268 HBL1_DMSO_200M_050219_2,9273 HBL1_DMSO_200M_050219_2,9273,YPFHKQPPTYV True True YPFHKQPPTYV 50.394291 688.854663074017 8396922.0 9268.0 nc|ENSG00000100258|Q9BU23-3|LMF2;;ENST00000504717.1_1_22:50941822-50943237:-|nuORF;;nc|ENSG00000100258|Q9BU23-2|LMF2;;ENSG00000100258|ENST00000474879|LMF2 10.110341707865397 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9274 50.4 322.0 302060.0 25 0 13716.0 + 42579 KFSPNTSQF 9 153 528.2612724243872 1054.5079919155744 2 528.2616454958916 MULTI CID FTMS 0 0 0 9268 168805.8125 1.0 0 0.0 6 Unmodified _VTQMSKSQF_ nc|ENSG00000154473|O43684-2|BUB3;ENSG00000154473|ENST00000368865|BUB3 27.628801355627647 0.1796483985696185 4 {NN|[MP]|[D{I|L}]|[EV]}[W{I|L}]PHAG{M(Oxidation (M))|F} 9 7 + 39.555 0.0 0.0 3.7511 3.7511 73.598 0.0 0.0 0.0 18.58612776689904 7.528383802016314 7.528383802016314 6.47817481888638 0 0.8182503180159344 1.3010299956639813 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[W{I|L}]PHAG{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[W{I|L}]PHQ{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}YVVQTA{M(Oxidation (M))|F};[AG]{M(Oxidation (M))|F}[VG]AATSQ{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[KC]AATSQ{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}Y{[TV]|[{I|L}S]}[Q{I|L}]G{M(Oxidation (M))|F};{[TV]|[{I|L}S]}HQEP[TP]{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}Y[{I|L}V]NTA{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VG]AATSQ{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}KK[CS]SQ{M(Oxidation (M))|F} 3.7511;3.1367;2.7598;2.7264;2.7048;2.6679;2.597;2.4744;2.4744;2.4693 -;-;-;-;-;-;-;-;-;- 1621 + 1 1.808 77523.7 1.0 4688 4584 9268 HBL1_DMSO_200M_050219_2,9274 HBL1_DMSO_200M_050219_2,9274,VTQMSKSQF False False KFSPNTSQF 50.400154 528.261645495892 1365124.625 9268.0 nc|ENSG00000154473|O43684-2|BUB3;;ENSG00000154473|ENST00000368865|BUB3 3.982463200887045 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9275 50.414 800.0 253170.0 25 0 33889.0 + 4583 DAYSIQGQHTI 11 137 616.7990178645831 1231.583482795966 2 616.7991210818291 MULTI CID FTMS 0 0 0 9268 176315.640625 0.609782775510557 -4 0.3724632263183594 7 Unmodified _DAYSIQGQHTI_ ENSG00000169564|ENST00000303577|PCBP1 91.08480475639789 0.0006208354794871 4 {[DA]|[EG]}YS{I|L}QGQHT{I|L} 11 0 + 89.919 0.0 0.0 7.3011 7.3011 89.177 0.0 0.0 0.0 45.22505401227521 20.15473400663282 20.15473400663282 9.128498242810991 0 1.2302046884880935 1.6989700043360187 2.2416440611282624 0.4247425010840047 + + {[DA]|[EG]}YS{I|L}QGQHT{I|L};{[DA]|[EG]}YS{I|L}[AG]GQHT{I|L};{[DA]|[EG]}YS{I|L}QG[AG]HT{I|L};YADS{I|L}QGQHT{I|L};{[DA]|[EG]}YS{I|L}QG[RH]W;{[DA]|[EG]}YS{I|L}[AG]G[AG]HT{I|L};YADS{I|L}[AG]GQHT{I|L};YADS{I|L}QG[AG]HT{I|L};{[DA]|[EG]}YS{I|L}[AG]G[RH]W;WYS{I|L}Q[EP][NP]V 7.3011;6.5599;6.5599;5.9727;5.542;5.4763;5.2315;5.2315;4.7979;4.7183 +;-;-;-;-;-;-;-;-;- + 4234 + 1 1.808 147226.3 0.8700000047683716 4689 4584 9268 HBL1_DMSO_200M_050219_2,9275 HBL1_DMSO_200M_050219_2,9275,DAYSIQGQHTI True True DAYSIQGQHTI 50.413991 616.799121081829 2581262.0 9268.0 ENSG00000169564|ENST00000303577|PCBP1 8.075265566507975 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9277 50.418 67.0 1067400.0 25 0 207800.0 + 12597 GVINRVEKI 9 82 343.2136803288323 1026.619211586697 3 343.2132446169853 MULTI CID FTMS 0 0 0 9276 851507.375 0.7308129730409377 2 -0.0645980834960937 1 Unmodified _GVINRVEKI_ ENSG00000087053|ENST00000346299|MTMR2;nc|ENSG00000087053|Q13614-2|MTMR2 30.63653989081413 0.1413794767160703 4 [VG]{I|L}N 4 5 40.802 0.0 0.0 3.9744 0.0 0.0 0.0 640.3852633111936 640.3852633111936 20.96910013008056 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3807196863200844 + [VG]{I|L}N 3.9744 + + 165 + 1 1.808 64738.5 1.0 4690 4585 9276 HBL1_DMSO_200M_050219_2,9277 HBL1_DMSO_200M_050219_2,9277,GVINRVEKI False True GVINRVEKI 50.418256 343.213244616985 7714303.5 9276.0 nc|ENSG00000087053|Q13614-2|MTMR2;;ENSG00000087053|ENST00000346299|MTMR2 1.5510880947113037 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9278 50.423 270.0 497410.0 25 0 43488.0 + 16983 KIWDPVHRV 9 124 383.8893487267547 1148.646216780464 3 383.8892700076103 MULTI CID FTMS 0 0 0 9276 258049.5 0.4040182712744096 3 -0.0811233520507812 2 Unmodified _KIWDPVHRV_ ENSG00000134900|ENST00000376052|TPP2;nc|ENSG00000134900|P29144|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 51.487983226225225 0.0371074584807926 4 [K{I|L}]WDPVV[RH] 9 2 + 57.983 0.0 0.0 5.048 5.048 76.488 0.0 0.0 0.0 12.218265928650531 4.771212547196626 4.771212547196626 4.771212547196626 0 1.2815246005338845 0.6575773191777937 0.0 0.75 [K{I|L}]WDPVV[RH];[K{I|L}]WDPVH[RV];[K{I|L}]WDVPV[RH];[K{I|L}]WDVPH[RV];[K{I|L}]WVPDV[RH];[K{I|L}]WVDPV[RH];[K{I|L}]WVPDH[RV];[K{I|L}]WVDPH[RV];[K{I|L}]WV[R{M(Oxidation (M))|F}][PG]{M(Oxidation (M))|F};[K{I|L}]WDV[RH][VP] 5.048;4.6326;4.3973;3.9819;3.7397;3.5466;3.3244;3.1312;2.1518;1.9928 -;+;-;-;-;-;-;-;-;- + 432 + 1 1.808 114415.8 1.0 4691 4585 9276 HBL1_DMSO_200M_050219_2,9278 HBL1_DMSO_200M_050219_2,9278,KIWDPVHRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9279 50.425 90.0 513140.0 25 0 33018.0 + 32195 RVVDELDNQM 10 73 609.7928654394397 1217.5711779456792 2 609.7929565310478 MULTI CID FTMS 0 0 0 9276 513859.5 0.02075803123217 -7 0.5006332397460938 3 Unmodified _RVVDELDNQM_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 26.020703789607367 0.3840598856887971 4 DE{I|L}DNQM 7 3 58.972 0.0 0.0 4.8434 0.0 0.0 354.23849287720486 0.0 354.23849287720486 0.0 39.24433880455972 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 + DE{I|L}DNQM 4.8434 + + 210 1 1.808 42786.2 1.0 4692 4585 9276 HBL1_DMSO_200M_050219_2,9279 HBL1_DMSO_200M_050219_2,9279,RVVDELDNQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9280 50.429 168.0 602080.0 25 0 42146.0 + 20887 LMPTGLPEL 9 111 485.7687766167918 0 485.7711669802666 PEAK CID FTMS 0 0 0 9276 300224.78125 0.1230261152803381 30 -2.420612335205078 4 Unmodified _LMPTGLPEL_ REV__ENSG00000148200|ENST00000487099|NR6A1;REV__nc|ENSG00000148200|Q15406-2|NR6A1;REV__nc|ENSG00000148200|Q15406-3|NR6A1;REV__nc|ENSG00000148200|Q15406-4|NR6A1;REV__nc|ENSG00000148200|Q15406-5|NR6A1 23.1484247019978 0.1725298825155634 4 PP 2 -1 10.969 0.0 0.0 1.1314 0.0 0.0 147.0621817713423 625.3321034907012 772.3942852620435 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 1.1314 - 106 + 1 1.808 81417.4 1.0 4693 4585 9276 HBL1_DMSO_200M_050219_2,9280 HBL1_DMSO_200M_050219_2,9280,LMPTGLPEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9281 50.434 290.0 292850.0 25 0 40734.0 + 2866 AVDPNRAVPL 10 108 526.2988882265724 1050.5832235199448 2 526.3000366091728 MULTI CID FTMS 0 0 0 9276 277880.5625 0.937563051223742 -2 0.108551025390625 5 Unmodified _AVDPNRAVPL_ ENSG00000048162|ENST00000614830|NOP16;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;ENST00000510608.1_1_5:175813700-175815552:-|nuORF;nc|ENSG00000048162|Q9Y3C1-2|NOP16;nc|ENSG00000048162|Q9Y3C1-3|NOP16 25.997395711884035 0.38458358153512 4 {[VA]|[{I|L}G]}D 3 7 37.205 0.0 0.0 3.5414 0.0 0.0 0.0 762.4286071618441 762.4286071618441 2.53552738111344 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.0 0.0 + {[VA]|[{I|L}G]}D 3.5414 + + 594 + 1 1.808 74347.7 1.0 4694 4585 9276 HBL1_DMSO_200M_050219_2,9281 HBL1_DMSO_200M_050219_2,9281,AVDPNRAVPL False True AVDPNRAVPL 50.433855 526.300036609173 1930555.75 9276.0 ENST00000510608.1_1_5:175813700-175815552:-|nuORF;;ENSG00000048162|ENST00000614830|NOP16;;nc|ENSG00000048162|Q9Y3C1-2|NOP16;;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;;nc|ENSG00000048162|Q9Y3C1-3|NOP16 5.604837258656819 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9282 50.441 375.0 244710.0 25 0 16940.0 + 29698 QPFSKPVSV 9 135 494.77691508013777 0 494.7764770388603 PEAK CID FTMS 0 0 0 9276 178768.0 1.0 0 0.0 6 Unmodified _QPFSKPVSV_ nc|ENSG00000285253|Q6N043-6|ZNF280D 17.11289562659939 0.230679707888486 4 A 1 9 6.9897 0.0 0.0 0.70779 0.0 0.0 130.11433612072022 783.3657417208996 913.4800778416196 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.70779 - 212 + 1 1.808 71711.5 1.0 4695 4585 9276 HBL1_DMSO_200M_050219_2,9282 HBL1_DMSO_200M_050219_2,9282,QPFSKPVSV False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9283 50.454 800.0 260640.0 25 0 64088.0 + 3692 DAFGKGKQLTV 11 183 388.552365454227 1162.6352669628811 3 388.5521423220634 MULTI CID FTMS 0 0 0 9276 168921.609375 1.0 0 0.0 7 Unmodified _DAFGKGKQLTV_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 13.534932898082838 0.7536045057035061 4 {[DA]|[EG]}{M(Oxidation (M))|F}GK 5 6 41.51 0.0 0.0 3.5704 0.0 0.0 0.0 641.3655489557249 641.3655489557249 24.075221787320515 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {[DA]|[EG]}{M(Oxidation (M))|F}GK 3.5704 + + 247 + 1 1.808 164351.5 0.7099999785423279 4696 4585 9276 HBL1_DMSO_200M_050219_2,9283 HBL1_DMSO_200M_050219_2,9283,DAFGKGKQLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9284 50.461 340.0 378120.0 25 0 21922.0 + 25306 NAFLSKSSV 9 171 476.7599679591832 951.5053829851664 2 476.7614623904228 MULTI CID FTMS 0 0 0 9276 178556.90625 0.518447472475783 2 -0.0645980834960937 8 Unmodified _NAFLSKSSV_ ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;nc|ENSG00000173821|Q63HN8|RNF213 26.268140514670165 0.1969607489560049 4 VPC 3 9 28.231 0.0 0.0 2.967 0.0 0.0 0.0 649.3294161432249 649.3294161432249 2.9532634314924167 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 VPC 2.967 - 1484 + 1 1.808 98840.2 1.0 4697 4585 9276 HBL1_DMSO_200M_050219_2,9284 HBL1_DMSO_200M_050219_2,9284,NAFLSKSSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9286 50.465 9.3 6062000.0 25 0 949350.0 + 21278 LPEDKPRLI 9 57 360.88556629443656 1079.6348694835096 3 360.8852416872978 MULTI CID FTMS 0 0 0 9285 4983068.0 0.7889021989141541 3 -0.0676002502441406 1 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 22.736283301280096 0.2418982879461534 4 {I|L}PEDK 5 4 60.433 0.0 0.0 5.5975 0.0 0.0 0.0 494.31017143002055 494.31017143002055 25.996075289514096 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.4247425010840047 0.4247425010840047 + {I|L}PEDK 5.5975 + + 34 + 1 1.808 55347.8 1.0 4698 4586 9285 HBL1_DMSO_200M_050219_2,9286 HBL1_DMSO_200M_050219_2,9286,LPEDKPRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9287 50.479 800.0 98963.0 25 0 7614.3 + 41995 VQPFESDRREQ 11 117 695.8387947138173 1389.6630364944344 2 695.8405029177666 MULTI CID FTMS 0 0 0 9285 61652.30859375 0.0972390465508588 4 -0.097930908203125 2 Unmodified _VQPFESDRREQ_ REV__ENST00000429271.1_1_21:28515665-28516046:-|nuORF 26.268140514670165 0.4754186812857754 4 [KA]CPWN{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q 12 -1 + 64.153 0.0 0.0 4.6165 4.6165 76.848 0.0 0.0 0.0 8.151613831301177 27.65539695625556 8.151613831301177 6.61181443446619 0 0.9247425010840048 0.0 0.0 1.0114393726401687 [KA]CPWN{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;[KA]CPWN{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;[KA]CP{[DA]|[EG]}N{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;[KA]CPWGG{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;[KA]CPWGG{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;[KA]{M(Oxidation (M))|F}[WY][KC]G{M(Oxidation (M))|F}{I|L}Q;[KA]{M(Oxidation (M))|F}[WY][C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}{I|L}Q;[Q{I|L}][Y{M(Oxidation (M))|F}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DG{M(Oxidation (M))|F}{I|L}Q;Y{[QD]|[EN]|[WG]|[KD]|[RS]}G{[QV]|[N{I|L}]|[RA]|[KV]}NWPH{M(Oxidation (M))|F};Y{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}NWPH{M(Oxidation (M))|F} 4.6165;4.1407;3.9618;3.9618;3.4838;2.5949;2.1217;2.1194;1.6147;1.4849 -;-;-;-;-;-;-;-;-;- 525 1 1.808 60828.5 0.8999999761581421 4699 4586 9285 HBL1_DMSO_200M_050219_2,9287 HBL1_DMSO_200M_050219_2,9287,VQPFESDRREQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9289 50.483 50.0 946010.0 25 0 135430.0 + + 22365 LPSESRVNI 9 65 507.7831831212543 1013.5518133093086 2 507.7834960818291 MULTI CID FTMS 0 0 0 9288 883318.5625 0.4536388629326086 -4 0.1731491088867187 1 Unmodified _LPSPPAAPPPA_ ENSG00000066557|ENST00000370952|LRRC40 19.256988751693697 0.6345794173041263 4 {I|L}PSE 4 -1 55.918 0.0 0.0 5.517 0.0 0.0 0.0 584.3193956206845 584.3193956206845 50.43305028184122 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.3494850021680094 0.0 {I|L}PSE 5.517 - 58 + 1 1.796 49700.5 1.0 4700 4587 9288 HBL1_DMSO_200M_050219_2,9289 HBL1_DMSO_200M_050219_2,9289,LPSPPAAPPPA False False LPSESRVNI 50.482857 507.783496081829 11039990.0 9288.0 ENSG00000066557|ENST00000370952|LRRC40 3.3060034116109214 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9290 50.486 178.0 657440.0 25 0 50607.0 + 1425 ALDPSLDNHQV 11 131 604.7994985590615 1207.5844441849229 2 604.7994262576103 MULTI CID FTMS 0 0 0 9288 576588.3125 0.7546506279434658 -2 0.0645980834960937 2 Unmodified _ALDPSLDNHQV_ ENSG00000168438|ENST00000307731|CDC40;ENST00000431461.1_1_6:110522811-110530492:+|nuORF;ENST00000606893.5_1_6:110501354-110532119:+|nuORF 90.13494162714682 0.0006528918523104 4 [{I|L}A]DPS{I|L}DNHQV 11 0 + 104.65 0.0 0.0 8.6664 8.6664 91.84 0.0 0.0 0.0 65.32137490304108 6.23307795206226 6.23307795206226 9.128498242810991 0 0.9247425010840048 2.0 0.6747425010840047 2.360924374808178 + + [{I|L}A]DPS{I|L}DNHQV;[{I|L}A]DPS{I|L}DGGHQV;[{I|L}A]DPS{I|L}DNH[AG]V;{[DS]|[MA]|[CV]|TT}PPS{I|L}DNHQV;[{I|L}A]DPS{I|L}DGGH[AG]V;{[DS]|[MA]|[CV]|TT}PPS{I|L}DGGHQV;{[DS]|[MA]|[CV]|TT}PPS{I|L}DNH[AG]V;[{I|L}A]DPST{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KC]V;[{I|L}A]DPMG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KC]V;[{I|L}A][EP][WQ]SPP[PS] 8.6664;7.9105;7.5952;5.5188;5.202;4.7629;4.4476;4.3753;4.0215;3.92 +;-;-;-;-;-;-;-;-;- + 1609 + 1 1.796 86887.4 1.0 4701 4587 9288 HBL1_DMSO_200M_050219_2,9290 HBL1_DMSO_200M_050219_2,9290,ALDPSLDNHQV True True ALDPSLDNHQV 50.486316 604.79942625761 4969974.0 9288.0 ENSG00000168438|ENST00000307731|CDC40;;ENST00000431461.1_1_6:110522811-110530492:+|nuORF;;ENST00000606893.5_1_6:110501354-110532119:+|nuORF 8.696954727172852 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9291 50.489 141.0 430550.0 25 0 86656.0 24910 MPPDPRPTL 9 76 512.2682993912351 1022.5220458492704 2 512.2683593630791 MULTI CID FTMS 0 0 0 9288 463849.6875 0.9341833077935682 -2 0.0645980834960937 3 Unmodified _MPPDPRPTL_ ENST00000465017.5_1_9:139685822-139687379:+|nuORF;ENST00000483187.5_1_9:139685862-139687379:+|nuORF 13.042465956692816 0.4836390050082244 4 MP 2 7 45.217 0.0 0.0 4.4221 0.0 0.0 0.0 791.4071403826763 791.4071403826763 22.636736735614 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + MP 4.4221 + + 51 + 1 1.796 54467.5 1.0 4702 4587 9288 HBL1_DMSO_200M_050219_2,9291 HBL1_DMSO_200M_050219_2,9291,MPPDPRPTL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9292 50.495 328.0 248300.0 25 0 16136.0 + 17002 DAQAFEREV 9 112 532.7848608794221 1063.5551688256442 2 532.7845336794853 MULTI CID FTMS 0 0 0 9288 172103.59375 0.0027873042311917 14 -1.1631011962890625 4 Unmodified _KIYEGQVEV_ ENST00000589179.5_1_12:53590293-53590665:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7;ENSG00000139626|ENST00000267082|ITGB7 47.74868867922204 0.0453060283459952 4 {[DA]|[EG]}QY[K{I|L}]VEV 9 6 + 71.959 0.0 0.0 6.7659 6.7659 88.615 0.0 0.0 0.0 14.839286116392785 31.76985621489237 14.839286116392785 9.208187539523747 0 0.3054621874040891 1.6989700043360187 1.1307196863200843 0.3494850021680094 {[DA]|[EG]}QY[K{I|L}]VEV;{[DA]|[EG]}[AG]Y[K{I|L}]VEV;{[DA]|[EG]}QYV[K{I|L}]EV;{[DA]|[EG]}QVY[K{I|L}]EV;[QA]DY[K{I|L}]VEV;{[DA]|[EG]}[AG]YV[K{I|L}]EV;{[QG]|[NA]}EY[K{I|L}]VEV;{[DA]|[EG]}[AG]VY[K{I|L}]EV;[QA]DYV[K{I|L}]EV;[QA]DVY[K{I|L}]EV 6.7659;5.9001;5.8485;5.3999;5.3141;4.9827;4.8225;4.5341;4.3967;3.9481 -;-;-;-;-;-;-;-;-;- 608 1 1.796 74304.1 1.0 4703 4587 9288 HBL1_DMSO_200M_050219_2,9292 HBL1_DMSO_200M_050219_2,9292,KIYEGQVEV True True DAQAFEREV 50.495143 532.784533679485 1115775.25 9288.0 ENST00000589179.5_1_12:53590293-53590665:-|nuORF;;nc|ENSG00000139626|P26010-2|ITGB7;;ENSG00000139626|ENST00000267082|ITGB7 6.5834425290425616 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9294 50.502 277.0 389360.0 25 0 26002.0 + 2759 ATLTLVHQA 9 140 477.273972363917 952.533391794634 2 477.2755004763603 MULTI CID FTMS 0 0 0 9293 104404.84375 0.3386656919126536 -3 0.0811233520507812 1 Unmodified _ATLTLVHQA_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 18.1463463914782 0.3454829746528889 4 [VP]AWEPVG 8 9 24.536 0.0 0.0 2.5758 0.0 0.0 0.0 114.0981860663716 114.0981860663716 9.667235909606289 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 0.0 [VP]AWEPVG 2.5758 - 1564 1 1.796 83216.0 1.0 4704 4588 9293 HBL1_DMSO_200M_050219_2,9294 HBL1_DMSO_200M_050219_2,9294,ATLTLVHQA False True ATLTLVHQA 50.502228 477.27550047636 4363837.5 9293.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 4.639064232508342 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9295 50.512 546.0 354190.0 25 0 21126.0 + 16748 KFKEVGEAF 9 211 527.7820703978819 1053.5495878625636 2 527.7811767458916 MULTI CID FTMS 0 0 0 9293 383048.28125 0.198964879982942 -4 0.1172981262207031 2 Unmodified _KFKEVGEAF_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 47.594388314883695 0.0456443387682827 4 [VG]STTP{M(Oxidation (M))|F}KA{M(Oxidation (M))|F} 10 8 + 59.226 0.0 0.0 5.6215 5.6215 73.279 0.0 0.0 0.0 1.5604416699965569 9.970076047171403 1.5604416699965569 1.5604416699965569 0 1.0 1.6989700043360187 0.5283773187068795 0.5451140161145328 [VG]STTP{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};[VS]GTTP{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};[VG]STTPA{M(Oxidation (M))|F}K{M(Oxidation (M))|F};[VG]STTP{M(Oxidation (M))|F}AK{M(Oxidation (M))|F};[VS]GTTPA{M(Oxidation (M))|F}K{M(Oxidation (M))|F};[VS]GTTP{M(Oxidation (M))|F}AK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}TTP{M(Oxidation (M))|F}KA{M(Oxidation (M))|F};K{M(Oxidation (M))|F}C{I|L}PSRG{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}TTP{M(Oxidation (M))|F}AK{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}TTPA{M(Oxidation (M))|F}K{M(Oxidation (M))|F} 5.6215;5.4734;5.2052;5.2052;5.0571;5.0571;4.8175;4.6752;4.6287;4.6287 -;-;-;-;-;-;-;-;-;- 5156 1 1.796 148887.9 1.0 4705 4588 9293 HBL1_DMSO_200M_050219_2,9295 HBL1_DMSO_200M_050219_2,9295,KFKEVGEAF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9296 50.514 121.0 418510.0 25 0 32138.0 + 22696 LQEDPPVGV 9 94 477.2510750626513 952.4875971921026 2 477.2499267458916 MULTI CID FTMS 0 0 0 9293 192940.9375 0.4799102007161059 -4 0.1172981262207031 3 Unmodified _LQEDPPVGV_ ENSG00000119048|ENST00000265339|UBE2B;ENST00000511807.1_1_5:133707262-133710155:+|nuORF 27.628801355627647 0.1796483985696185 4 HMPPVR 6 6 45.099 0.0 0.0 4.7348 0.0 0.0 217.1070118634781 0.0 217.1070118634781 0.0 28.156108725862083 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.0 HMPPVR 4.7348 - 397 1 1.796 44993.4 1.0 4706 4588 9293 HBL1_DMSO_200M_050219_2,9296 HBL1_DMSO_200M_050219_2,9296,LQEDPPVGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9297 50.528 800.0 230360.0 25 0 26880.0 + 38197 TPRHIIVRF 9 184 380.23328011376 1137.67801094148 3 380.5674621462822 MULTI CID FTMS 0 0 0 9293 87354.609375 0.6771871591962969 -3 0.0811233520507812 4 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 29.43715596616401 0.1566398223704148 4 T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}VR 9 2 + 49.476 0.0 0.0 4.3489 4.3489 76.523 0.0 0.0 0.0 37.69330097924218 9.749321833847873 9.749321833847873 7.403626894942434 0 1.1010708450141438 0.0 0.0 0.2302046884880938 T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}VR;T[RP]H{I|L}{M(Oxidation (M))|F}{I|L}VR;T[RP]H{I|L}{I|L}[RV]{M(Oxidation (M))|F};T[RP]H{M(Oxidation (M))|F}{I|L}{I|L}VR;T[RP]H{I|L}{M(Oxidation (M))|F}[RV]{I|L};T[RP]H{M(Oxidation (M))|F}{I|L}[RV]{I|L} 4.3489;3.6981;3.4072;2.4771;2.4136;1.1926 -;-;+;-;-;- + 139 + 1 1.796 152542.7 0.5799999833106995 4707 4588 9293 HBL1_DMSO_200M_050219_2,9297 HBL1_DMSO_200M_050219_2,9297,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9299 50.538 417.0 247740.0 25 0 13162.0 + 25225 MVAPVTGNDV 10 154 501.7496573438144 0 501.7494994997978 PEAK CID FTMS 0 0 0 9298 160885.515625 0.4902351689510595 6 -0.5334243774414062 1 Unmodified _MVAPVTGNDV_ ENSG00000137575|ENST00000260130|SDCBP;ENST00000519115.5_1_8:59477592-59490768:+|nuORF;ENST00000522843.5_1_8:59477592-59488665:+|nuORF;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP 11.640296217721598 0.3623705791714445 4 M 1 9 5.4846 0.0 0.0 0.54764 0.0 0.0 295.1162402023314 572.3053072565061 867.4215474588375 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 0.54764 + + 320 + 1 1.796 79158.4 1.0 4708 4589 9298 HBL1_DMSO_200M_050219_2,9299 HBL1_DMSO_200M_050219_2,9299,MVAPVTGNDV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9300 50.539 35.0 1460800.0 25 0 258300.0 + 14478 IGFENHETV 9 76 523.2507821310112 1044.4870113288223 2 523.2509643435478 MULTI CID FTMS 0 0 0 9298 1175525.875 0.94878662607542 -2 0.049530029296875 2 Unmodified _IGFENHETV_ ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF 32.78568957990786 0.1150597335874693 4 {I|L}G{M(Oxidation (M))|F}Q{[MS]|[{M(Oxidation (M))|F}A]}YTV 9 4 + 49.529 0.0 0.0 4.7419 4.7419 82.658 0.0 0.0 0.0 34.35895234555808 6.916309546812371 6.916309546812371 12.703037561203844 0 0.4247425010840047 1.0457574905606752 0.3807196863200844 0.3494850021680094 {I|L}G{M(Oxidation (M))|F}Q{[MS]|[{M(Oxidation (M))|F}A]}YTV;{I|L}G{M(Oxidation (M))|F}[AG]{[MS]|[{M(Oxidation (M))|F}A]}YTV;{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[C(Carbamidomethyl (C))D]YTV 4.7419;3.5257;1.4187 -;-;- 115 + 1 1.796 45016.9 1.0 4709 4589 9298 HBL1_DMSO_200M_050219_2,9300 HBL1_DMSO_200M_050219_2,9300,IGFENHETV True True IGFENHETV 50.538747 523.250964343548 8802230.0 9298.0 ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 5.49711815516154 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9301 50.553 800.0 97942.0 25 0 14077.0 25778 NKALRKIRKL 10 84 620.4214982293854 0 620.4214355349541 PEAK CID FTMS 0 0 0 9298 162031.046875 1.0 0 0.0 3 Unmodified _NKALRKIRKL_ ENSG00000091138|ENST00000340010|SLC26A3 0.4007161486938917 0.3961065659209837 4 ANQGAAE 7 9 29.033 0.0 0.0 2.3436 0.0 0.0 346.49529608235724 248.03186975650627 594.5271658388635 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 ANQGAAE 2.3436 - 166 + 1 1.796 69530.9 0.9900000095367432 4710 4589 9298 HBL1_DMSO_200M_050219_2,9301 HBL1_DMSO_200M_050219_2,9301,NKALRKIRKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9302 50.559 327.0 330050.0 25 0 28286.0 + 24256 MAPLVRKI 8 121 464.2944686906242 926.5743844480484 2 464.2948486208916 MULTI CID FTMS 0 0 0 9298 124050.375 0.4889438015635167 -2 0.049530029296875 4 Unmodified _MAPLVRKI_ ENSG00000169684|ENST00000299565|CHRNA5 23.1484247019978 0.5573009939494978 4 MA{I|L}PV 5 5 53.047 0.0 0.0 5.7251 0.0 0.0 0.0 412.26914392642817 412.26914392642817 39.06804392152253 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 MA{I|L}PV 5.7251 - 173 + 1 1.796 87530.8 1.0 4711 4589 9298 HBL1_DMSO_200M_050219_2,9302 HBL1_DMSO_200M_050219_2,9302,MAPLVRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9304 50.576 800.0 113500.0 25 0 6576.1 + 5120 DIFATREVEV 10 138 589.8074318951129 1177.6003108570258 2 589.8083373904228 MULTI CID FTMS 0 0 0 9303 51792.0625 0.4853634674190914 -1 0.0303306579589843 1 Unmodified _DIFATREVEV_ REV__ENSG00000088881|ENST00000609451|EBF4;REV__ENST00000609967.5_1_20:2674291-2732741:+|nuORF;REV__nc|ENSG00000088881|Q9BQW3-1|EBF4 20.41453444215458 0.5050059513928961 4 [{M(Oxidation (M))|F}V]VQDAY 7 -1 33.639 0.0 0.0 2.8566 0.0 0.0 0.0 352.20002161197505 352.20002161197505 16.33285157489162 0.0 0.0 0.0 0 0.3252574989159953 0.7958800173440752 0.4247425010840047 0.0 [{M(Oxidation (M))|F}V]VQDAY 2.8566 - 857 + 1 1.779 72659.6 0.8500000238418579 4712 4590 9303 HBL1_DMSO_200M_050219_2,9304 HBL1_DMSO_200M_050219_2,9304,DIFATREVEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9305 50.577 18.0 1968200.0 25 0 175590.0 + 21896 LPPEYASTV 9 64 488.7531476276548 975.4917423221096 2 488.7531616091728 MULTI CID FTMS 0 0 0 9303 3121027.75 0.8195895523612885 -1 0.0303306579589843 2 Unmodified _LPPEYASTV_ ENSG00000178913|ENST00000313368|TAF7 28.486842064014134 0.1687311288560894 4 [EP]PHP{I|L}STV 9 4 [EP]PHP{I|L}S + + 22.519 25.265 3.3359 2.3084 2.3084 44.876 0.0 0.0 0.0 0.0 -6.8837976454305085 -6.8837976454305085 0.0 0 0.0 0.0 0.3054621874040891 0.0 [EP]PHP{I|L}STV 2.3084 - 324 + 1 1.779 35521.7 1.0 4713 4590 9303 HBL1_DMSO_200M_050219_2,9305 HBL1_DMSO_200M_050219_2,9305,LPPEYASTV False True LPPEYASTV 50.576811 488.753161609173 353482960.0 9303.0 ENSG00000178913|ENST00000313368|TAF7 5.608161767323812 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9306 50.578 58.0 1796000.0 25 0 254680.0 + 23506 LTKGGNVN 8 74 401.7233966030445 801.4322402728891 2 402.2247192263603 MULTI CID FTMS 0 0 0 9303 878528.0 0.8637568402894084 -1 0.0303306579589843 3 Unmodified _LTKGGNVN_ REV__ENSG00000106034|ENST00000310396|CPED1 0.6903765706972694 0.8201419426409876 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA][Q{I|L}]V 7 -1 12.125 0.0 0.0 1.5129 0.0 0.0 0.0 56.024343300458696 56.024343300458696 6.640297345076366 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA][Q{I|L}]V 1.5129 - 36 1 1.779 87186.1 1.0 4714 4590 9303 HBL1_DMSO_200M_050219_2,9306 HBL1_DMSO_200M_050219_2,9306,LTKGGNVN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9307 50.582 194.0 685690.0 25 0 50393.0 + 24257 MAPLVRKI 8 107 309.86505508704187 0 309.8651306033134 PEAK CID FTMS 0 0 0 9303 369660.15625 0.680567749403668 -2 0.0633354187011718 4 Unmodified _MAPLVRKI_ ENSG00000169684|ENST00000299565|CHRNA5 44.40701690623563 0.1214779822192256 4 VR 2 6 9.4505 0.0 0.0 1.5299 0.0 0.0 103.35522104557192 256.16816126041255 359.52338230598446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 + VR 1.5299 + + 14 + 1 1.779 115440.1 1.0 4715 4590 9303 HBL1_DMSO_200M_050219_2,9307 HBL1_DMSO_200M_050219_2,9307,MAPLVRKI True True MAPLVRKI 50.581976 309.865130603313 5968028.875 9303.0 ENSG00000169684|ENST00000299565|CHRNA5 3.675870339075724 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9308 50.589 364.0 439720.0 25 0 92540.0 + 16749 KFKEVGEAF 9 172 352.190737149205 1053.550382047815 3 352.1898986697197 MULTI CID FTMS 0 0 0 9303 218819.703125 0.3379920755486374 -2 0.0633354187011718 5 Unmodified _KFKEVGEAF_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 27.628801355627647 0.1796483985696185 4 [YT]SVAKE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 7 + 41.026 0.0 0.0 3.8941 3.8941 65.24 0.0 0.0 0.0 22.865612383257385 3.65279269351241 3.65279269351241 0.8633577339526397 0 0.2742275032520141 1.0457574905606752 0.8494850021680094 0.0 [YT]SVAKE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[YT]SAVKE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[YT]TGVKE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[YT]SVAKR{[ET]|[MV]};[YT]SAVKR{[ET]|[MV]};[YT]TGVKR{[ET]|[MV]};[YT]TRKE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[YT]SVAK{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EKAVDA{M(Oxidation (M))|F};[YT]SAVK{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L} 3.8941;3.8121;3.719;3.4697;3.3877;3.2946;3.2829;3.142;3.0745;3.06 -;-;-;-;-;-;-;-;-;- 889 + 1 1.779 131797.1 1.0 4716 4590 9303 HBL1_DMSO_200M_050219_2,9308 HBL1_DMSO_200M_050219_2,9308,KFKEVGEAF False True KFKEVGEAF 50.588528 352.18989866972 21156256.5 9303.0 ENSG00000168259|ENST00000457167|DNAJC7;;nc|ENSG00000168259|Q99615-2|DNAJC7 5.37374226252238 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9310 50.593 3.5 14031000.0 25 0 1133800.0 + 21033 LPAADVKNI 9 79 470.7769749218427 939.5393969104854 2 470.7770263552666 MULTI CID FTMS 0 0 0 9309 17087926.0 1.0 0 0.0 1 Unmodified _LPAADVKNI_ ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF 57.72198328787511 0.0273433238377839 4 {I|L}PAADVKN{I|L} 9 0 + 86.2 0.0 0.0 9.1748 9.1748 95.692 0.0 0.0 0.0 42.96896906561031 13.416375079047498 13.416375079047498 12.703037561203844 0 1.3807196863200843 1.6989700043360187 0.0 0.7302046884880937 + + {I|L}PAADVKN{I|L};{I|L}PAADVKGG{I|L} 9.1748;7.8227 +;- + 424 + 1 1.779 43786.1 1.0 4717 4591 9309 HBL1_DMSO_200M_050219_2,9310 HBL1_DMSO_200M_050219_2,9310,LPAADVKNI True True LPAADVKNI 50.592769 470.777026355267 365182920.0 9309.0 ENSG00000139719|ENST00000267199|VPS33A;;ENST00000544349.5_1_12:122735394-122750988:-|nuORF 4.979504426320394 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9311 50.594 6.0 8188400.0 25 0 1009200.0 + 6148 DSYTPKVI 8 71 461.7478237351223 921.4810945370448 2 461.7478820681572 MULTI CID FTMS 0 0 0 9309 9884396.0 0.5383093255032179 6 -0.6271286010742188 2 Unmodified _DSYTPKVI_ ENSG00000133872|ENST00000256255|SARAF;ENST00000517569.1_1_8:29931365-29940465:-|nuORF 46.020951573049366 0.1579632664462935 4 [KP]VTY{[DS]|[MA]|[CV]|TT}{I|L} 8 5 + 31.119 0.0 0.0 3.3771 3.3771 72.022 0.0 0.0 0.0 1.9453781259591023 7.887955392469692 1.9453781259591023 6.020599913279625 0 0.3494850021680094 0.0 0.0 0.0 [KP]VTY{[DS]|[MA]|[CV]|TT}{I|L};[KP]TVY{[DS]|[MA]|[CV]|TT}{I|L} 3.3771;2.7237 -;- 88 1 1.779 44160.9 1.0 4718 4591 9309 HBL1_DMSO_200M_050219_2,9311 HBL1_DMSO_200M_050219_2,9311,DSYTPKVI False True DSYTPKVI 50.593948 461.747882068157 488578992.0 9309.0 ENST00000517569.1_1_8:29931365-29940465:-|nuORF;;ENSG00000133872|ENST00000256255|SARAF 7.207175731658935 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9312 50.595 14.0 3783900.0 25 0 370220.0 + 27562 PLAPMEPLL 9 67 498.7771091138352 995.5396652944704 2 498.7774536013603 MULTI CID FTMS 0 0 0 9309 4424610.5 0.9752455382997208 1 -0.1561241149902343 3 Oxidation (M) _PLAPM(Oxidation (M))EPLL_ ENSG00000137877|ENST00000320955|SPTBN5 56.541270873467816 0.0279970378729908 4 [{I|L}P][WE]EP{I|L}{I|L} 8 3 + 68.862 0.0 0.0 6.917 6.917 91.83 0.0 0.0 0.0 14.313637641589878 16.40978057358332 14.313637641589878 14.313637641589878 0 1.3494850021680094 2.0 0.7742275032520141 0.0 [{I|L}P][WE]EP{I|L}{I|L};[EP][W{I|L}]EP{I|L}{I|L};[{I|L}P][HA][MT]T{I|L}{I|L};[TP][QP][KC]P{I|L}{I|L} 6.917;5.4792;5.0079;4.7302 -;-;-;- 121 1 1.779 47127.5 1.0 4719 4591 9309 HBL1_DMSO_200M_050219_2,9312 HBL1_DMSO_200M_050219_2,9312,PLAPMEPLL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9313 50.596 18.0 3384200.0 25 0 544030.0 + 22029 LPPPPPPAM 9 72 458.751710776598 915.488868619996 2 458.7519714236259 MULTI CID FTMS 0 0 0 9309 3561259.0 0.8051906033109218 11 -1.1894264221191406 4 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP 6 3 53.734 0.0 0.0 5.8694 0.0 0.0 0.0 314.1165057119451 314.1165057119451 36.10924374808178 0.0 0.0 0.0 0 1.610924374808178 1.5228787452803376 0.0 0.0 + [{I|L}P]PPPP 5.8694 + + 231 1 1.779 53581.4 1.0 4720 4591 9309 HBL1_DMSO_200M_050219_2,9313 HBL1_DMSO_200M_050219_2,9313,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9314 50.598 49.0 1473500.0 25 0 182410.0 26908 PDLVIHPPR 9 83 348.5384366082079 1042.5934804248238 3 348.5380126833916 MULTI CID FTMS 0 0 0 9309 1178670.375 0.8000867342427843 2 -0.3433647155761719 5 Unmodified _PDLVIHPPR_ AluSg_dup35978|chr22:21630283-21630588:+|1.0585618963741046|0.2892960562738399|1.87|48.0|11|1|anti-sense;AluY_dup65734|chr11:44619481-44619789:+|1.5335058333898055|0.0057506542606521|8.06|48.0|22|3|anti-sense 7.289230182591677 0.6602208344931196 4 DPYRPV 6 7 66.503 0.0 0.0 6.3786 0.0 0.0 0.0 312.2049349420532 312.2049349420532 55.53395642852614 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.4247425010840047 DPYRPV 6.3786 - 75 + 1 1.779 67766.1 1.0 4721 4591 9309 HBL1_DMSO_200M_050219_2,9314 HBL1_DMSO_200M_050219_2,9314,PDLVIHPPR False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 9315 50.6 143.0 314660.0 25 0 40015.0 -1 LGDTWSRQMHP 11 59 672.3141554862992 1342.6137580393984 2 672.8162109255791 MULTI CID FTMS 0 0 0 9309 410606.84375 0.9482935590554636 6 -0.6271286010742188 6 Oxidation (M) _LGDTWSRQM(Oxidation (M))HP_ ENSG00000168306|ENST00000302819|ACOX2;ENST00000480791.1_1_3:58520620-58520914:-|nuORF 8.745405648335112 0.8338865417133445 4 QS{[ES]|[DT]|[{I|L}C]}AV 6 -1 9.1175 0.0 0.0 0.67908 0.0 0.0 555.2653216153734 183.05007349185783 738.3153951072312 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 QS{[ES]|[DT]|[{I|L}C]}AV 0.67908 - 30 + 1 1.779 41373.1 1.0 4722 4591 9309 HBL1_DMSO_200M_050219_2,9315 HBL1_DMSO_200M_050219_2,9315,LGDTWSRQMHP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9316 50.605 245.0 356450.0 25 0 19678.0 + 32187 RVVDELDNQM 10 111 617.7902076725306 1233.5658624118612 2 617.7902099490166 MULTI CID FTMS 0 0 0 9309 289522.65625 0.148388090724657 -1 0.0300521850585937 7 Oxidation (M) _RVVDELDNQM(Oxidation (M))_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 93.16586880292088 0.0091067182461363 4 [RV]VDE{I|L}DNQ{M(Oxidation (M))|F} 10 0 + 99.092 0.0 0.0 8.0329 8.0329 91.042 0.0 0.0 0.0 19.30400924012389 70.06289394320262 19.30400924012389 9.164539485499247 0 0.8807196863200843 1.0 1.055462187404089 1.4604093769761874 + + [RV]VDE{I|L}DNQ{M(Oxidation (M))|F};[RV]VDE{I|L}DGGQ{M(Oxidation (M))|F};[RV]VDE{I|L}DN[AG]{M(Oxidation (M))|F};[RV]VDE{I|L}DGG[AG]{M(Oxidation (M))|F};[RV]VDE[TP]SGQ{M(Oxidation (M))|F};[RV]VDE[TP]SG[AG]{M(Oxidation (M))|F};[RV]VDE{I|L}[NG]{[DA]|[EG]}{M(Oxidation (M))|F};[RV]VDE[NP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[{I|L}P]D[KT]SGQ{M(Oxidation (M))|F};[RV]VDE[NP]N[YE] 8.0329;7.29;7.29;6.55;5.4985;4.7585;3.9745;3.277;2.7851;2.319 +;-;-;-;-;-;-;-;-;- + 585 1 1.779 68181.3 1.0 4723 4591 9309 HBL1_DMSO_200M_050219_2,9316 HBL1_DMSO_200M_050219_2,9316,RVVDELDNQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9317 50.609 209.0 383210.0 25 0 27997.0 + -1 IPPPPPPAM 9 130 466.7492067760757 931.4838606189514 2 466.7495300173759 MULTI CID FTMS 0 0 0 9309 285036.3125 0.4086891111758916 16 -1.6756820678710938 8 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENST00000468653.5_1_3:160117521-160130242:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4 79.93452657146344 0.0175326119056068 4 [{I|L}P]PPPPPA{M(Oxidation (M))|F} 9 -1 + 65.274 0.0 0.0 7.0076 7.0076 92.016 0.0 0.0 0.0 20.87128018967597 13.767507096020992 13.767507096020992 13.767507096020992 0 1.4674165578762484 1.5228787452803376 0.0 0.0 [{I|L}P]PPPPPA{M(Oxidation (M))|F};[{I|L}P]PPPP[WE];[{I|L}P][YK]PPA{M(Oxidation (M))|F};[{I|L}P]P[YK]PA{M(Oxidation (M))|F};[{I|L}P]PP[YK]A{M(Oxidation (M))|F};[{I|L}P][YK]P[WE];[{I|L}P]P[YK][WE];[{I|L}P]PP[Y{M(Oxidation (M))|F}][QA];[{I|L}P]PAS[WY]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KAPP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 7.0076;5.5296;4.8278;4.5717;4.4087;3.3572;3.101;2.7798;2.5621;2.4757 +;-;-;-;-;-;-;-;-;- + 873 + 1 1.779 69000.4 1.0 4724 4591 9309 HBL1_DMSO_200M_050219_2,9317 HBL1_DMSO_200M_050219_2,9317,LPPPPPPAM False False IPPPPPPAM 50.609029 466.749530017376 195108876.0 9309.0 ENST00000468653.5_1_3:160117521-160130242:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 6.683818817138672 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9318 50.623 800.0 448280.0 25 0 69611.0 + 39911 VFPTRTARF 9 215 365.54205293986325 1093.6043294197898 3 365.5414001345634 MULTI CID FTMS 0 0 0 9309 218502.96875 0.2103088369778549 11 -1.1894264221191406 9 Unmodified _VFPTRTARF_ ENSG00000213339|ENST00000250237|QTRT1 36.12702656103203 0.0967173616627612 4 V{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 6 30.473 0.0 0.0 2.7865 0.0 0.0 0.0 697.3765948262973 697.3765948262973 17.373857263035674 0.0 0.0 0.0 0 0.4274913471593705 0.0 0.0 0.0 V{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.7865 - 243 + 1 1.779 285834.3 0.9100000262260436 4725 4591 9309 HBL1_DMSO_200M_050219_2,9318 HBL1_DMSO_200M_050219_2,9318,VFPTRTARF True True VFPTRTARF 50.622846 365.541400134563 60171376.0 9309.0 ENSG00000213339|ENST00000250237|QTRT1 5.81666914621989 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9319 50.635 721.0 231000.0 25 0 18198.0 + 18513 KYQAQDNFM 9 161 572.7580017003875 1143.5014504675748 2 572.7585327029228 MULTI CID FTMS 0 0 0 9309 194342.09375 0.1058459565512857 8 -0.8406753540039062 10 Unmodified _KYQAQDNFM_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029186-157029948:-|nuORF;nc|ENSG00000122692|Q2TAY7-2|SMU1 47.74868867922204 0.0453060283459952 4 [{I|L}A]VGM{M(Oxidation (M))|F}DN{M(Oxidation (M))|F}M 10 6 + 46.998 0.0 0.0 4.11 4.11 71.261 0.0 0.0 0.0 3.6675055410631785 13.521825181113613 3.6675055410631785 3.6675055410631785 0 0.3494850021680094 0.9208187539523752 0.0 0.7742275032520141 [{I|L}A]VGM{M(Oxidation (M))|F}DN{M(Oxidation (M))|F}M;[YK]QAQDN{M(Oxidation (M))|F}M;[TA]VV[{M(Oxidation (M))|F}T]DN{M(Oxidation (M))|F}M;[{I|L}A]SV[{M(Oxidation (M))|F}T]DN{M(Oxidation (M))|F}M;[{I|L}A]VS[{M(Oxidation (M))|F}T]DN{M(Oxidation (M))|F}M;[YQ]KAQDN{M(Oxidation (M))|F}M;[{I|L}A]{[WT]|[RM]}{M(Oxidation (M))|F}DN{M(Oxidation (M))|F}M;{[TV]|[{I|L}S]}AV[{M(Oxidation (M))|F}T]DN{M(Oxidation (M))|F}M;{[TV]|[{I|L}S]}[RD]{M(Oxidation (M))|F}DN{M(Oxidation (M))|F}M;{NN|[MP]|[D{I|L}]|[EV]}KCHHN{M(Oxidation (M))|F}M 4.11;3.7893;3.7007;3.6622;3.641;3.6176;3.6091;3.6074;3.5542;3.5392 -;+;-;-;-;-;-;-;-;- + 2146 1 1.779 127762.2 1.0 4726 4591 9309 HBL1_DMSO_200M_050219_2,9319 HBL1_DMSO_200M_050219_2,9319,KYQAQDNFM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9320 50.648 739.0 377360.0 25 0 43957.0 39703 VEGLRVFDKES 11 126 639.8376766228437 1277.6608003124873 2 639.8388549685478 MULTI CID FTMS 0 0 0 9309 188401.765625 0.0376928143694305 -2 0.0603828430175781 11 Unmodified _VEGLRVFDKES_ ENSG00000198336|ENST00000393450|MYL4 16.149105407346934 0.6992268271266642 4 [TP]SVVAVTV 9 10 70.751 0.0 0.0 5.5375 0.0 0.0 0.0 421.1444812456781 421.1444812456781 39.42798507144687 0.0 0.0 0.0 0 0.0 0.8538719643217619 2.989494018187783 0.0 [TP]SVVAVTV 5.5375 - 2989 1 1.779 204345.6 1.0 4727 4591 9309 HBL1_DMSO_200M_050219_2,9320 HBL1_DMSO_200M_050219_2,9320,VEGLRVFDKES False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9321 50.662 800.0 362170.0 25 0 59923.0 + 14687 IISWQNRLN 9 176 381.8804636079431 0 381.8806030154228 PEAK CID FTMS 0 0 0 9309 166851.859375 0.6331502121228795 -1 0.0300521850585937 12 Unmodified _IISWQNRLN_ REV__ENSG00000177990|ENST00000324472|DPY19L2;REV__ENST00000413230.6_1_12:63954294-63977630:-|nuORF;REV__ENST00000458672.5_1_7:35121204-35144268:-|nuORF;REV__nc|ENSG00000177990|Q6NUT2-2|DPY19L2 24.020572477871973 0.1646235280836931 4 E 1 -1 6.5938 0.0 0.0 0.86562 0.0 0.0 513.6298104172549 116.05121790103748 629.6810283182924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E 0.86562 - 177 + 1 1.779 231744.4 0.8299999833106995 4728 4591 9309 HBL1_DMSO_200M_050219_2,9321 HBL1_DMSO_200M_050219_2,9321,IISWQNRLN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9322 50.668 239.0 415190.0 25 0 36749.0 + 100 AAIGALQEA 9 123 422.2319123625967 842.4492717919934 2 422.2306091189384 MULTI CID FTMS 0 0 0 9309 146642.984375 0.2518321601748055 -1 0.0300521850585937 13 Unmodified _AAIGALQEA_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000268799|ENST00000600799|H3Y2;ENSG00000269466|ENST00000598383|H3Y1;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF 42.96799951952854 0.0591636306142405 4 {[VA]|[{I|L}G]}AAGMP{[QV]|[N{I|L}]|[RA]|[KV]} 9 6 + 42.062 0.0 0.0 4.9928 4.9928 74.302 0.0 0.0 0.0 11.461280356782378 0.7378621416091846 0.7378621416091846 3.4678748622465605 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}AAGMP{[QV]|[N{I|L}]|[RA]|[KV]};{[VA]|[{I|L}G]}AQMP{[QV]|[N{I|L}]|[RA]|[KV]};AAVAGMP{[QV]|[N{I|L}]|[RA]|[KV]};AAVQMP{[QV]|[N{I|L}]|[RA]|[KV]};AA{I|L}GGMP{[QV]|[N{I|L}]|[RA]|[KV]};AAQVMP{[QV]|[N{I|L}]|[RA]|[KV]};[AG]{I|L}AGMP{[QV]|[N{I|L}]|[RA]|[KV]};{[VA]|[{I|L}G]}G{[WS]|[C(Carbamidomethyl (C)){I|L}]}P{[QV]|[N{I|L}]|[RA]|[KV]};AAG{I|L}GMP{[QV]|[N{I|L}]|[RA]|[KV]};[Q{I|L}]AGMP{[QV]|[N{I|L}]|[RA]|[KV]} 4.9928;4.5811;3.6323;3.2207;2.9176;2.8633;2.7917;2.6715;2.5936;2.5644 -;-;-;-;-;-;-;-;-;- 982 1 1.779 83427.5 1.0 4729 4591 9309 HBL1_DMSO_200M_050219_2,9322 HBL1_DMSO_200M_050219_2,9322,AAIGALQEA True True AAIGALQEA 50.667923 422.230609118938 3939513.75 9309.0 ENSG00000269466|ENST00000598383|H3Y1;;ENSG00000163041|ENST00000366815|H3-3A;;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000268799|ENST00000600799|H3Y2;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF 2.0377984046936035 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9323 50.682 800.0 130180.0 25 0 20882.0 -1 VDFDSRLQAA 10 141 582.2886063113395 0 582.3242065310478 PEAK CID FTMS 0 0 0 -1 0 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VDFDSRLQAA_ ENSG00000169946|ENST00000407775|ZFPM2;ENST00000522296.1_1_8:106801010-106807985:+|nuORF;nc|ENSG00000169946|Q8WW38-2|ZFPM2 10.073929032068715 0.3742530088597855 4 A{I|L}S 3 -1 12.92 0.0 0.0 1.1113 0.0 0.0 160.0803121326415 728.3111055963499 888.3914177289914 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 A{I|L}S 1.1113 - 295 + 1 1.779 79527.7 0.8299999833106995 4730 4591 9309 HBL1_DMSO_200M_050219_2,9323 HBL1_DMSO_200M_050219_2,9323,VDFDSRLQAA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9324 50.696 800.0 830560.0 25 0 58328.0 + 8023 ENDLKDLHS 9 278 535.7595843269002 1069.5046157206002 2 535.7605468630791 MULTI CID FTMS 0 0 0 9309 99755.5234375 0.1971593912682619 -2 0.0603828430175781 15 Unmodified _ENDLKDLHS_ REV__ENSG00000143499|ENST00000366957|SMYD2;REV__ENST00000471645.5_1_1:214454597-214504559:+|nuORF;REV__ENST00000491455.5_1_1:214454597-214505536:+|nuORF;REV__nc|ENSG00000143499|Q9NRG4-2|SMYD2 53.832793166522166 0.0319663582346103 4 [RV]VDE{I|L}DN 8 -1 67.102 0.0 0.0 6.2741 0.0 0.0 0.0 126.0151285729112 126.0151285729112 36.885100714508965 0.0 0.0 0.0 0 0.1462566630072955 0.6020599913279624 1.3441876774005248 1.5030834337684311 [RV]VDE{I|L}DN 6.2741 - 11325 1 1.779 502399.5 0.8199999928474426 4731 4591 9309 HBL1_DMSO_200M_050219_2,9324 HBL1_DMSO_200M_050219_2,9324,ENDLKDLHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9325 50.711 800.0 250530.0 25 0 26529.0 + -1 EENGKMKMLE 10 150 620.7829922306007 1239.551431528001 2 621.2855712771416 MULTI CID FTMS 0 0 0 9309 103712.7421875 1.0 0 0.0 16 2 Oxidation (M) _EENGKM(Oxidation (M))KM(Oxidation (M))LE_ REV__ENSG00000182670|ENST00000418766|TTC3;REV__ENST00000399586.2_1_X:74960734-74966719:-|nuORF;REV__ENST00000460328.5_1_21:38463688-38468944:+|nuORF;REV__ENST00000491952.1_1_21:38466330-38467745:+|nuORF 23.78978130925829 0.4341852049148378 4 [RV]VDEHDNQE 10 -1 + 68.955 0.0 0.0 5.5629 5.5629 82.679 0.0 0.0 0.0 15.368931070804592 44.786465885450966 15.368931070804592 9.030899869919438 0 0.805462187404089 1.0 0.3807196863200844 0.9291746928241124 [RV]VDEHDNQE;[RV]VDEHNDQE;[RV]VDEHDN[AG]E;[RV]VDEHDGGQE;[RV]VDEHGGDQE;[RV]VDEHND[AG]E;[RV]VDEHDGG[AG]E;[RV]VDEHGGD[AG]E;[{I|L}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EHDNQE;[{I|L}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EHNDQE 5.5629;4.8344;4.8236;4.8236;4.095;4.095;4.0872;3.3586;2.9409;2.2124 -;-;-;-;-;-;-;-;-;- 985 1 1.779 146934.7 0.8100000023841858 4732 4591 9309 HBL1_DMSO_200M_050219_2,9325 HBL1_DMSO_200M_050219_2,9325,EENGKMKMLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9326 50.724 800.0 173980.0 25 0 14869.0 + 1492 ALGPAAHTL 9 165 425.7433126930912 849.4720724529825 2 425.7430297732353 MULTI CID FTMS 0 0 0 9309 99806.3359375 0.9610421391399028 -1 0.0300521850585937 17 Unmodified _ALGPAAHTL_ REV__ENST00000535420.5_1_1:154989902-154990361:+|nuORF 19.438996006549623 0.310492472477042 4 [R{M(Oxidation (M))|F}]{I|L}[NS]T{I|L} 7 -1 + 29.71 0.0 0.0 3.4974 3.4974 74.135 0.0 0.0 0.0 10.32924130362474 6.5220444404238975 6.5220444404238975 7.825382125373963 0 0.5 0.0 0.3494850021680094 0.0 [R{M(Oxidation (M))|F}]{I|L}[NS]T{I|L};[HA][QP]{I|L}AT{I|L};[QP][HA]{I|L}AT{I|L};[TA]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}AT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RRAT{I|L};[HA][QP]A{I|L}T{I|L};[PG]A[HA]{I|L}AT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}T{I|L};[R{M(Oxidation (M))|F}]{I|L}[C(Carbamidomethyl (C))R]V;[QP]{I|L}[HA]AT{I|L} 3.4974;2.5762;1.8675;1.8351;1.7284;1.5814;1.5682;1.5221;1.2849;1.0446 -;-;-;-;-;-;-;-;-;- 420 + 1 1.779 109329.8 0.6600000262260437 4733 4591 9309 HBL1_DMSO_200M_050219_2,9326 HBL1_DMSO_200M_050219_2,9326,ALGPAAHTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9327 50.738 800.0 114340.0 25 0 7648.0 + 43180 VYVIKSEDY 9 129 558.285252984657 0 558.2850219607353 PEAK CID FTMS 0 0 0 9309 89440.3203125 0.4433534666568663 1 -0.1561241149902343 18 Unmodified _VYVIKSEDY_ ENSG00000169375|ENST00000394947|SIN3A 37.97399986684836 0.0716774499419844 4 V{I|L}[PG]YE 6 7 24.063 0.0 0.0 2.159 0.0 0.0 262.13076182823914 191.08355127506096 453.2143131033001 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.6694451763165201 0.0 V{I|L}[PG]YE 2.159 - 254 + 1 1.779 74855.2 0.8399999737739563 4734 4591 9309 HBL1_DMSO_200M_050219_2,9327 HBL1_DMSO_200M_050219_2,9327,VYVIKSEDY True True VYVIKSEDY 50.738241 558.285021960735 821684.5 9309.0 ENSG00000169375|ENST00000394947|SIN3A 4.548270384470622 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9328 50.745 282.0 263540.0 25 0 30027.0 + 1404 ALCEENMRGV 10 91 561.2573463279153 1120.5001397226306 2 561.2560912966728 MULTI CID FTMS 0 0 0 9309 88864.6953125 0.3218613997365275 -1 0.0300521850585937 19 Unmodified _ALCEENMRGV_ ENSG00000167658|ENST00000309311|EEF2 24.99096001346401 0.4071966087057876 4 [{I|L}A]CEENM 7 3 62.479 0.0 0.0 5.576 0.0 0.0 0.0 327.17926965885005 327.17926965885005 55.48918221526151 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + [{I|L}A]CEENM 5.576 + + 83 + 1 1.779 61192.5 1.0 4735 4591 9309 HBL1_DMSO_200M_050219_2,9328 HBL1_DMSO_200M_050219_2,9328,ALCEENMRGV False True ALCEENMRGV 50.744618 561.256091296673 1938779.0 9309.0 ENSG00000167658|ENST00000309311|EEF2 5.607676982879639 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9330 50.749 2.4 18401000.0 25 0 1409600.0 + 32196 RVVDELDNQM 10 75 609.7928654394397 1217.5711779456792 2 609.7932006716728 MULTI CID FTMS 0 0 0 9329 24754732.0 1.0 0 0.0 1 Unmodified _RVVDELDNQM_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 49.52724829834842 0.0829255630816734 4 [RV]VDE{I|L}DNQM 10 0 + 70.17 0.0 0.0 5.7631 5.7631 83.944 0.0 0.0 0.0 2.7545373444029053 54.685559738766045 2.7545373444029053 9.164539485499256 0 0.3494850021680094 0.0 0.7302046884880937 0.4247425010840047 + + [RV]VDE{I|L}DNQM;[RV]VDE{I|L}DGGQM;[RV]VDE{I|L}DN[AG]M;[DN]{I|L}[KQ]{I|L}DNQM;[RV]VDE{I|L}DGG[AG]M;[DN]{I|L}[KQ]{I|L}DGGQM;[DN]{I|L}[KQ]{I|L}DN[AG]M;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[Y{I|L}][YK]NQM;{[QN]|[E{I|L}]|[KN]}[RH][YK]NQM 5.7631;5.0104;5.0104;4.6416;4.2607;3.889;3.889;2.209;2.1367 +;-;-;-;-;-;-;-;- + 179 1 1.769 40071.4 1.0 4736 4592 9329 HBL1_DMSO_200M_050219_2,9330 HBL1_DMSO_200M_050219_2,9330,RVVDELDNQM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9331 50.75 21.0 2276400.0 25 0 350070.0 + 21279 LPEDKPRLI 9 68 360.88556629443656 1079.6348694835096 3 360.8852416872978 MULTI CID FTMS 0 0 0 9329 2218919.75 0.3512917483745045 9 -0.897064208984375 2 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 21.53697664764585 0.2571576504437394 4 {I|L}PEDKP 6 3 57.357 0.0 0.0 5.3126 0.0 0.0 0.0 397.2573641412719 397.2573641412719 26.554556341805764 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.4247425010840047 0.0 + {I|L}PEDKP 5.3126 + + 39 + 1 1.769 47454.6 1.0 4737 4592 9329 HBL1_DMSO_200M_050219_2,9331 HBL1_DMSO_200M_050219_2,9331,LPEDKPRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9332 50.751 54.0 912440.0 25 0 50619.0 + + 19886 RTLDSVSQI 9 74 509.7787027148058 1017.5428524964116 2 509.7798950076103 MULTI CID FTMS 0 0 0 9329 1072798.875 1.0 0 0.0 3 Unmodified _LHQHRSQL_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B 52.268347100219714 0.1285778651304833 4 {[QN]|[E{I|L}]|[KN]}SRSVSQ{I|L} 9 -1 + 65.741 0.0 0.0 6.4607 6.4607 87.446 0.0 0.0 0.0 3.65279269351241 50.2560549062987 3.65279269351241 9.208187539523747 0 0.7134679910804405 0.0 1.274227503252014 0.0 {[QN]|[E{I|L}]|[KN]}SRSVSQ{I|L};{[QN]|[E{I|L}]|[KN]}SRSVS[AG]{I|L};{[QN]|[E{I|L}]|[KN]}SRS[WK]{I|L};{[QN]|[E{I|L}]|[KN]}SRS[WQ]{I|L};{[QS]|[NT]}{[QV]|[N{I|L}]|[RA]|[KV]}[KT]SQ{I|L};{[QN]|[E{I|L}]|[KN]}SRS[PA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[Q{I|L}][NS][KT]SQ{I|L};{[WT]|[RM]}SQQKQ{I|L};{[WT]|[RM]}SQQK[AG]{I|L} 6.4607;5.5558;3.5535;3.5535;2.985;2.6433;2.4055;1.9639;0.73405 -;-;-;-;-;-;-;-;- 152 1 1.769 44959.8 1.0 4738 4592 9329 HBL1_DMSO_200M_050219_2,9332 HBL1_DMSO_200M_050219_2,9332,LHQHRSQL False False RTLDSVSQI 50.751454 509.77989500761 9379731.0 9329.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 5.210427284240723 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9333 50.753 92.0 672090.0 25 0 130990.0 + 21276 LPEDKPRLI 9 66 540.824583029168 1079.634613125136 2 540.8250610232353 MULTI CID FTMS 0 0 0 9329 573987.75 0.3073647628096764 9 -0.897064208984375 4 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 31.26834338654808 0.1333407332142048 4 {I|L}PEDK 5 4 72.251 0.0 0.0 6.6921 0.0 0.0 0.0 494.3114818557113 494.3114818557113 50.82387206599456 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.4247425010840047 0.0 + {I|L}PEDK 6.6921 + + 43 + 1 1.769 55503.6 1.0 4739 4592 9329 HBL1_DMSO_200M_050219_2,9333 HBL1_DMSO_200M_050219_2,9333,LPEDKPRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9334 50.757 163.0 417940.0 25 0 44017.0 + 18205 KVDSNGVITV 10 97 516.2899223805719 1030.5652918279436 2 516.2902709841728 MULTI CID FTMS 0 0 0 9329 427178.1875 0.4629185364140607 -1 0.1561241149902343 5 Unmodified _KVDSNGVITV_ ENSG00000011143|ENST00000393119|MKS1;nc|ENSG00000011143|Q9NXB0-2|MKS1;nc|ENSG00000011143|Q9NXB0-3|MKS1 45.739877483867886 0.1051543674217965 4 [{I|L}T]Q[NS]GV{I|L}TV 10 3 + 64.415 0.0 0.0 6.2505 6.2505 73.226 0.0 0.0 0.0 6.964011157217236 42.44721092388088 6.964011157217236 0.2435003003541425 0 0.6203715150305281 1.154901959985743 0.2215141619232908 1.4604093769761874 [{I|L}T]Q[NS]GV{I|L}TV;[{I|L}T]QEEV{I|L}TV;[{I|L}T][AG][NS]GV{I|L}TV;[{I|L}T][NG]{[SA]|[TG]}GV{I|L}TV;[{I|L}T][NG]{[QS]|[NT]}V{I|L}TV;{[TV]|[{I|L}S]}AA[NS]GV{I|L}TV;{[TV]|[{I|L}S]}{[QG]|[NA]}{[SA]|[TG]}GV{I|L}TV;[{I|L}T]Q[NS]R{I|L}TV;{[TV]|[{I|L}S]}{[QG]|[NA]}{[QS]|[NT]}V{I|L}TV;[{I|L}T]V{[SA]|[TG]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}TV 6.2505;6.2268;5.3612;5.3612;5.3333;5.2608;5.2608;5.2472;5.233;4.7486 -;-;-;-;-;-;-;-;-;- 875 1 1.769 57237.6 1.0 4740 4592 9329 HBL1_DMSO_200M_050219_2,9334 HBL1_DMSO_200M_050219_2,9334,KVDSNGVITV True True KVDSNGVITV 50.756699 516.290270984173 21349042.5 9329.0 nc|ENSG00000011143|Q9NXB0-2|MKS1;;nc|ENSG00000011143|Q9NXB0-3|MKS1;;ENSG00000011143|ENST00000393119|MKS1 6.538312911987305 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9335 50.766 537.0 339440.0 25 0 72797.0 + 24911 MPPDPRPTL 9 130 512.2682993912351 1022.5220458492704 2 512.2684814333916 MULTI CID FTMS 0 0 0 9329 403615.3125 0.812872570292256 3 -0.3169174194335937 6 Unmodified _MPPDPRPTL_ ENST00000465017.5_1_9:139685822-139687379:+|nuORF;ENST00000483187.5_1_9:139685862-139687379:+|nuORF 39.94969957227396 0.0757326808254658 4 MPPD{I|L} 5 4 68.315 0.0 0.0 6.6811 0.0 0.0 0.0 466.2432039850219 466.2432039850219 49.61880661731264 0.0 0.0 0.0 0 1.1861818737241734 2.0 0.0 0.0 MPPD{I|L} 6.6811 - 163 + 1 1.769 150372.5 1.0 4741 4592 9329 HBL1_DMSO_200M_050219_2,9335 HBL1_DMSO_200M_050219_2,9335,MPPDPRPTL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9336 50.769 121.0 420720.0 25 0 46590.0 + 39332 VAFEEQNAV 9 92 503.74534675962303 1005.476140586046 2 503.7452270388603 MULTI CID FTMS 0 0 0 9329 361542.625 1.0 0 0.0 7 Unmodified _VAFEEQNAV_ ENSG00000064961|ENST00000333651|HMG20B;ENST00000461099.1_1_19:3576912-3578370:+|nuORF;ENST00000488973.6_1_19:3574329-3578516:+|nuORF;nc|ENSG00000064961|Q9P0W2-2|HMG20B;nc|ENSG00000064961|Q9P0W2-3|HMG20B 30.22481116460888 0.1466181017706357 4 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[{M(Oxidation (M))|F}H]|[RQ]} 8 3 + 22.219 0.0 0.0 2.2098 2.2098 68.948 0.0 0.0 0.0 8.239379703504977 -7.001962355242956 -7.001962355242956 5.105742396127916 0 0.0 1.2218487496163564 0.2887254899964357 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[{M(Oxidation (M))|F}H]|[RQ]};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}W{[CP]|[EA]}{[{M(Oxidation (M))|F}H]|[RQ]};{[MS]|[{M(Oxidation (M))|F}A]}VE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[{M(Oxidation (M))|F}H]|[RQ]};[{M(Oxidation (M))|F}E]{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[{M(Oxidation (M))|F}H]|[RQ]} 2.2098;1.702;0.32922;0.20304 -;-;-;- 88 1 1.769 44780.1 1.0 4742 4592 9329 HBL1_DMSO_200M_050219_2,9336 HBL1_DMSO_200M_050219_2,9336,VAFEEQNAV False True VAFEEQNAV 50.768641 503.74522703886 2911069.75 9329.0 ENST00000461099.1_1_19:3576912-3578370:+|nuORF;;ENST00000488973.6_1_19:3574329-3578516:+|nuORF;;nc|ENSG00000064961|Q9P0W2-2|HMG20B;;ENSG00000064961|ENST00000333651|HMG20B;;nc|ENSG00000064961|Q9P0W2-3|HMG20B 2.800764958063761 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9337 50.779 582.0 235370.0 25 0 41746.0 + -1 MQITTKCQSNW 11 110 699.3137539833486 1396.6129550334972 2 699.3144409060478 MULTI CID FTMS 0 0 0 9329 357377.90625 0.3748148064147741 2 -0.233551025390625 8 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))QITTKCQSNW_ REV__ENST00000457674.7_1_19:9801678-9801756:-|nuORF 7.608950283845883 0.8392484121837455 4 [TP]TTMT{I|L}SY 9 -1 51.693 0.0 0.0 3.7013 0.0 0.0 0.0 398.1294094614847 398.1294094614847 16.624462066892633 0.0 0.0 0.0 0 0.0 0.8538719643217619 2.816100275075455 0.0 [TP]TTMT{I|L}SY 3.7013 - 1902 1 1.769 102545.7 1.0 4743 4592 9329 HBL1_DMSO_200M_050219_2,9337 HBL1_DMSO_200M_050219_2,9337,MQITTKCQSNW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9338 50.784 286.0 292420.0 25 0 28507.0 + 25744 NIPDEELKRV 10 87 404.8908665220804 1211.6507701664411 3 404.8911926150322 MULTI CID FTMS 0 0 0 9329 296246.875 0.6357003563915953 7 -0.6845512390136719 9 Unmodified _NIPDEELKRV_ ENSG00000087053|ENST00000346299|MTMR2;nc|ENSG00000087053|Q13614-2|MTMR2 27.22323531849824 0.3570408936368626 4 {[QV]|[N{I|L}]|[RA]|[KV]}PDEE{I|L}KRV 10 0 + 60.856 0.0 0.0 5.0226 5.0226 82.958 0.0 0.0 0.0 42.97606315708258 7.007415322865569 7.007415322865569 10.299632233774432 0 0.3054621874040891 2.0 0.0 0.3494850021680094 + + {[QV]|[N{I|L}]|[RA]|[KV]}PDEE{I|L}KRV;{[QV]|[N{I|L}]|[RA]|[KV]}PDE[K{I|L}]ERV;{[QV]|[N{I|L}]|[RA]|[KV]}PDV[R{I|L}][DG][{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}PDE[RK]{[QN]|[E{I|L}]|[KN]}V;{[QV]|[N{I|L}]|[RA]|[KV]}PDV[WK]{[QN]|[E{I|L}]|[KN]}V 5.0226;4.1726;3.3536;2.8735;2.3766 +;-;-;-;- + 152 + 1 1.769 73701.6 1.0 4744 4592 9329 HBL1_DMSO_200M_050219_2,9338 HBL1_DMSO_200M_050219_2,9338,NIPDEELKRV False True NIPDEELKRV 50.784087 404.891192615032 14491203.25 9329.0 nc|ENSG00000087053|Q13614-2|MTMR2;;ENSG00000087053|ENST00000346299|MTMR2 6.936279296875 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9339 50.798 800.0 258840.0 25 0 18112.0 + 32633 SAYLTQQV 8 170 455.2377974318494 908.4610419304988 2 455.2378723025322 MULTI CID FTMS 0 0 0 9329 188110.359375 0.2115572939280369 5 -0.4710044860839844 10 Unmodified _SAYLTQQV_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA;nc|ENSG00000115970|Q6YHU6-6|THADA 32.116972079565 0.368454113111938 4 {[SA]|[TG]}Y 3 5 18.697 0.0 0.0 2.0581 0.0 0.0 0.0 584.3049993927812 584.3049993927812 5.31489255709751 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + {[SA]|[TG]}Y 2.0581 + + 347 1 1.769 163512.1 0.9300000071525574 4745 4592 9329 HBL1_DMSO_200M_050219_2,9339 HBL1_DMSO_200M_050219_2,9339,SAYLTQQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9340 50.812 800.0 105580.0 25 0 20050.0 -1 0 57 1099.788925450783 3296.344946952549 3 1100.456591784954 MULTI CID FTMS 0 0 0 9329 196783.15625 1.0 0 0.0 11 4 E 1 -1 6.9897 0.0 0.0 0.21204 0.0 0.0 2640.116154485828 524.1634005182249 3164.279555004053 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21204 - 24 + 1 1.769 78756.1 0.7799999713897705 4746 4592 9329 HBL1_DMSO_200M_050219_2,9340 HBL1_DMSO_200M_050219_2,9340, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9341 50.817 308.0 263920.0 25 0 14464.0 15854 ISNEFKVEV 9 127 532.7848608794221 1063.5551688256442 2 532.7849609255791 MULTI CID FTMS 0 0 0 9329 184880.25 0.0029942286030199 19 -1.7129592895507812 12 Unmodified _ISNEFKVEV_ ENSG00000171603|ENST00000377298|CLSTN1;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;nc|ENSG00000171603|O94985-2|CLSTN1 25.399314129420983 0.2080152500878129 4 {[VA]|[{I|L}G]}AKEVVMSM 10 8 {[VA]|[{I|L}G]}AKEVVM + + 23.513 -9.6239 -1.163 2.2108 2.2108 44.757 0.0 0.0 0.0 0.0 0.8361343778773289 0.0 0.0 0 0.3494850021680094 0.0 0.2059771852360797 0.0 {[VA]|[{I|L}G]}AKEVVMSM 2.2108 - 421 + 1 1.769 67896.7 1.0 4747 4592 9329 HBL1_DMSO_200M_050219_2,9341 HBL1_DMSO_200M_050219_2,9341,ISNEFKVEV False True KQIEGTGISM 50.817403 532.784960925579 548688.4375 9329.0 ENSG00000132964|ENST00000381527|CDK8;;nc|ENSG00000132964|P49336-2|CDK8;;ENSG00000155111|ENST00000368911|CDK19 2.3183041413625083 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9342 50.832 800.0 130900.0 25 0 36000.0 -1 0 47 1184.8412292576293 3551.501858373088 3 1185.177905261517 MULTI CID FTMS 0 0 0 9329 172778.5625 1.0 0 0.0 13 4 YGYCV 5 -1 17.474 0.0 0.0 0.49202 0.0 0.0 1781.601908277188 1181.6306856744752 2963.232593951663 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YGYCV 0.49202 - 42 + 1 1.769 92348.3 0.6899999976158142 4748 4592 9329 HBL1_DMSO_200M_050219_2,9342 HBL1_DMSO_200M_050219_2,9342, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9343 50.846 800.0 147120.0 25 0 7784.5 -1 MCYCTLVKHS 10 126 621.770636985444 1241.5267210376878 2 621.7697021365166 MULTI CID FTMS 0 0 0 9329 187058.515625 1.0 0 0.0 14 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))CYCTLVKHS_ ENST00000404141.5_1_7:154753335-154754148:-|nuORF 8.745405648335112 0.6861838735306406 4 [RV]VDEHDNQM 10 -1 + 60.186 0.0 0.0 4.8477 4.8477 78.752 0.0 0.0 0.0 17.113780515433994 48.40336964582816 17.113780515433994 7.7815125038364386 0 0.0 1.0457574905606752 0.4247425010840047 0.2396518287104437 [RV]VDEHDNQM;[RV]VDEHNDQM;[RV]VDEHDGGQM;[RV]VDEHDN[AG]M;[RV]VDE{I|L}D{[YC]|[HE]}M;[RV]VDEHND[AG]M;[RV]VDEHGGDQM;[RV]VDEHDGG[AG]M;[RV]V{[YC]|[HE]}DDNQM;[RV]VDEHGGD[AG]M 4.8477;4.221;4.1096;4.1096;3.826;3.4828;3.4828;3.3743;3.0664;2.7475 -;-;-;-;-;-;-;-;-;- 759 1 1.769 89883.4 0.949999988079071 4749 4592 9329 HBL1_DMSO_200M_050219_2,9343 HBL1_DMSO_200M_050219_2,9343,MCYCTLVKHS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9344 50.86 800.0 43331.0 25 0 4979.3 + 12895 GVYNGKTFNQV 11 69 613.8108398318291 0 613.8108398318291 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _GVYNGKTFNQV_ ENSG00000115268|ENST00000592588|RPS15;ENST00000522454.1_1_5:164028010-164028223:-|nuORF 16.149105407346934 0.3934762919021404 4 N 1 10 11.237 0.0 0.0 0.91686 0.0 0.0 319.14772839237054 789.3913500455633 1108.5390784379338 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + N 0.91686 + + 5 + 1 1.769 35920.9 0.9300000071525574 4750 4592 9329 HBL1_DMSO_200M_050219_2,9344 HBL1_DMSO_200M_050219_2,9344,GVYNGKTFNQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9345 50.875 800.0 167960.0 25 0 13711.0 + -1 NETKKERCEFY 11 97 752.3466488353819 1502.6787447375636 2 752.3476440310478 MULTI CID FTMS 0 0 0 9329 147380.21875 0.958223367245505 -2 0.1861763000488281 16 Carbamidomethyl (C) _NETKKERC(Carbamidomethyl (C))EFY_ REV__ENSG00000105835|ENST00000222553|NAMPT;REV__ENST00000393618.5_1_7:105910735-105925330:-|nuORF;REV__ENST00000486949.5_1_7:105912936-105925330:-|nuORF;REV__ENST00000489358.5_1_7:105912543-105925330:-|nuORF;REV__ENST00000489732.1_1_7:105917445-105925330:-|nuORF 9.38312468134398 0.8308777417566128 4 {[QG]|[NA]}G[YK]EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 78.735 0.0 0.0 5.2397 5.2397 78.869 0.0 0.0 0.0 6.149898754066257 9.943508928956476 6.149898754066257 6.149898754066257 0 0.7429928190999391 0.7958800173440752 0.3807196863200844 1.548455006504028 {[QG]|[NA]}G[YK]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YK]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[YK]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[YK]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[YK]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE[YK]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YK]EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YK]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YK]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQE[YK]QNA{M(Oxidation (M))|F}Y 5.2397;4.8304;4.6359;4.6359;4.6359;4.305;4.2249;4.2249;4.2249;3.8958 -;-;-;-;-;-;-;-;-;- 1541 1 1.769 102171.4 0.8399999737739563 4751 4592 9329 HBL1_DMSO_200M_050219_2,9345 HBL1_DMSO_200M_050219_2,9345,NETKKERCEFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9346 50.889 800.0 150200.0 25 0 9292.6 + 2099 IYQKDATFY 9 148 574.2955203563465 1146.576487779493 2 574.2961913943291 MULTI CID FTMS 0 0 0 9329 128782.0 0.5894460590983102 5 -0.4710044860839844 17 Unmodified _APSAASQMKRT_ ENSG00000129347|ENST00000312962|KRI1;ENST00000546063.5_1_19:10672436-10676629:-|nuORF;ENST00000478863.5_1_19:10666000-10676642:-|nuORF 21.53697664764585 0.586507868110548 4 {[TV]|[{I|L}S]}QS{M(Oxidation (M))|F}H{I|L} 7 8 32.269 0.0 0.0 2.8144 0.0 0.0 0.0 331.14909455123046 331.14909455123046 0.0143188958933535 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.7951140161145327 0.3807196863200844 {[TV]|[{I|L}S]}QS{M(Oxidation (M))|F}H{I|L} 2.8144 - 3918 1 1.769 91977.7 0.7900000214576721 4752 4592 9329 HBL1_DMSO_200M_050219_2,9346 HBL1_DMSO_200M_050219_2,9346,APSAASQMKRT False False IYQKDATFY 50.888959 574.296191394329 558850.3125 9329.0 ENSG00000129347|ENST00000312962|KRI1;;ENST00000546063.5_1_19:10672436-10676629:-|nuORF;;ENST00000478863.5_1_19:10666000-10676642:-|nuORF 4.058881044387817 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9347 50.903 800.0 66992.0 25 0 3749.7 -1 FPCMNSLEEE 10 99 636.2493696716467 1270.4841864100931 2 636.2494384646416 MULTI CID FTMS 0 0 0 9329 125437.0625 1.0 0 0.0 18 Carbamidomethyl (C),Oxidation (M) _FPC(Carbamidomethyl (C))M(Oxidation (M))NSLEEE_ nc|ENSG00000176406|Q9UQ26-7|RIMS2 6.723162845929126 0.6955379296933136 4 Q 1 -1 15.401 0.0 0.0 1.2122 0.0 0.0 1124.4143144391933 0.0 1124.4143144391933 0.0 3.069334721591659 0.0 0.0 0 0.0 0.0 0.0 0.2302046884880938 Q 1.2122 - 70 + 1 1.769 47296.5 0.7400000095367432 4753 4592 9329 HBL1_DMSO_200M_050219_2,9347 HBL1_DMSO_200M_050219_2,9347,FPCMNSLEEE False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9348 50.918 800.0 70189.0 25 0 5311.9 + 25745 NIPDEELKRV 10 94 606.8333618044853 0 606.8333618044853 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _NIPDEELKRV_ ENSG00000087053|ENST00000346299|MTMR2;nc|ENSG00000087053|Q13614-2|MTMR2 10.799506525563784 0.3687487927162991 4 PW 2 9 14.222 0.0 0.0 1.1737 0.0 0.0 227.12545988031096 698.3534639947874 925.4789238750984 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 PW 1.1737 - 14 + 1 1.769 45840.8 0.7400000095367432 4754 4592 9329 HBL1_DMSO_200M_050219_2,9348 HBL1_DMSO_200M_050219_2,9348,NIPDEELKRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9349 50.932 800.0 77477.0 25 0 5805.3 + -1 KCKETFEEHYF 11 80 759.3375176497359 0 759.3392211794853 PEAK CID FTMS 0 0 0 9329 107478.3046875 1.0 0 0.0 20 Carbamidomethyl (C) _KC(Carbamidomethyl (C))KETFEEHYF_ REV__ENST00000551270.1_1_12:104283206-104309165:-|nuORF;REV__nc|ENSG00000214198|Q6P2S7-2|TTC41P;REV__nc|ENSG00000214198|Q6P2S7|TTC41P 5.296884461304476 0.47618401536486 4 ANQQAET 7 -1 42.74 0.0 0.0 2.818 0.0 0.0 328.14181218222035 443.1801241510376 771.3219363332579 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.805462187404089 ANQQAET 2.818 - 662 + 1 1.769 54224.0 0.6499999761581421 4755 4592 9329 HBL1_DMSO_200M_050219_2,9349 HBL1_DMSO_200M_050219_2,9349,KCKETFEEHYF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9351 50.936 31.0 954500.0 25 0 105880.0 21034 LPAADVKNI 9 66 470.7769749218427 939.5393969104854 2 470.7769958376884 MULTI CID FTMS 0 0 0 9350 911135.6875 0.0533204373368658 2 -0.1296768188476562 1 Unmodified _LPAADVKNI_ ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122735394-122750988:-|nuORF 19.256988751693697 0.3154191944385105 4 [PA]{[DA]|[EG]}VK 6 3 19.454 0.0 0.0 2.0706 0.0 0.0 0.0 355.1997722369104 355.1997722369104 8.033886172605115 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 + [PA]{[DA]|[EG]}VK 2.0706 + + 46 1 1.772 27867.7 1.0 4756 4593 9350 HBL1_DMSO_200M_050219_2,9351 HBL1_DMSO_200M_050219_2,9351,LPAADVKNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9352 50.937 13.0 3982000.0 25 0 360330.0 + 2154 APYPTPAQV 9 70 472.2480499366312 942.4815469400623 2 472.2479431033134 MULTI CID FTMS 0 0 0 9350 4393854.5 0.9589096657104896 -1 0.1872406005859375 2 Unmodified _APYPTPAQV_ ENSG00000198807|ENST00000361487|PAX9 81.86404211737425 0.017065112157077 4 [PA][TP]YPAQV 9 2 + 52.698 0.0 0.0 5.5914 5.5914 78.829 0.0 0.0 0.0 6.320232147054057 10.330145895351848 6.320232147054057 4.771212547196626 0 1.048455006504028 1.154901959985743 1.2302046884880935 0.0 [PA][TP]YPAQV;[PA]Y[TP]PAQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[TP]PAQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TP]APAQV;{NN|[MP]|[D{I|L}]|[EV]}{[ET]|[MV]}APAQV;[TP][PA]YPAQV;[TP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APAQV;[PA]Q{[QS]|[NT]}[VS]QV;[PA]{NN|[MP]|[D{I|L}]|[EV]}{[ET]|[MV]}AQV;[PA][TP]A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QV 5.5914;5.0852;4.9208;4.7883;4.4973;3.9438;3.305;2.7562;2.5138;2.4882 -;+;-;-;-;-;-;-;-;- + 418 1 1.772 47048.5 1.0 4757 4593 9350 HBL1_DMSO_200M_050219_2,9352 HBL1_DMSO_200M_050219_2,9352,APYPTPAQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9353 50.939 11.0 4704900.0 25 0 682060.0 23851 LVIDNVTRFDS 11 57 639.8376766228437 1277.6608003124873 2 639.8379394412041 MULTI CID FTMS 0 0 0 9350 4998347.0 1.0 0 0.0 3 Unmodified _LVIDNVTRFDS_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN 10.799506525563784 0.8105043987015127 4 [TP][VS]VAVT 8 9 32.752 0.0 0.0 2.5635 0.0 0.0 0.0 520.2145472209435 520.2145472209435 10.814243664528576 0.0 0.0 0.0 0 0.0 0.0 2.0356668758921828 0.0 [TP][VS]VAVT 2.5635 - 118 1 1.772 46974.0 1.0 4758 4593 9350 HBL1_DMSO_200M_050219_2,9353 HBL1_DMSO_200M_050219_2,9353,LVIDNVTRFDS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9354 50.94 17.0 2727500.0 25 0 211310.0 + 21258 LPDTMSLTV 9 77 488.7531476276548 975.4917423221096 2 488.7531616091728 MULTI CID FTMS 0 0 0 9350 3382275.75 0.8881939187836254 2 -0.1296768188476562 4 Unmodified _LPDTMSLTV_ REV__ENSG00000134376|ENST00000367400|CRB1;REV__nc|ENSG00000134376|P82279-2|CRB1;REV__nc|ENSG00000134376|P82279-3|CRB1;REV__nc|ENSG00000134376|P82279-4|CRB1 30.22481116460888 0.1466181017706357 4 [EP]YAPS 6 -1 23.288 0.0 0.0 2.3874 0.0 0.0 0.0 328.1877011446283 328.1877011446283 -0.1413688858352202 0.0 -0.1413688858352202 0.0 0 0.0 0.0 0.4247425010840047 0.0 [EP]YAPS 2.3874 - 259 1 1.772 43445.9 1.0 4759 4593 9350 HBL1_DMSO_200M_050219_2,9354 HBL1_DMSO_200M_050219_2,9354,LPDTMSLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9355 50.941 16.0 2516200.0 25 0 235710.0 + 15188 IPEHLTATL 9 68 497.7826336165617 993.5507142999236 2 497.7825195193291 MULTI CID FTMS 0 0 0 9350 2707090.25 0.9484904849727344 -1 0.1872406005859375 5 Unmodified _IPEHLTATL_ REV__ENSG00000165219|ENST00000297933|GAPVD1;REV__nc|ENSG00000165219|Q14C86-3|GAPVD1;REV__nc|ENSG00000165219|Q14C86-4|GAPVD1;REV__nc|ENSG00000165219|Q14C86-5|GAPVD1;REV__nc|ENSG00000165219|Q14C86-6|GAPVD1;REV__nc|ENSG00000165219|Q14C86|GAPVD1 36.04419817259434 0.0971720506436186 4 ATVAKC(Carbamidomethyl (C)){I|L} 7 -1 41.151 0.0 0.0 4.1418 0.0 0.0 232.1416699657422 0.0 232.1416699657422 0.0 22.109951187817103 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 ATVAKC(Carbamidomethyl (C)){I|L} 4.1418 - 243 + 1 1.772 36842.0 1.0 4760 4593 9350 HBL1_DMSO_200M_050219_2,9355 HBL1_DMSO_200M_050219_2,9355,IPEHLTATL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9356 50.942 21.0 2393300.0 25 0 504720.0 + 14790 ILDQKINEV 9 77 536.3064495897556 1070.5983462463112 2 536.3064453005791 MULTI CID FTMS 0 0 0 9350 2481664.75 0.8425537444597027 -1 0.1872406005859375 6 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 39.94969957227396 0.0757326808254658 4 {I|L}{I|L}DQ 4 5 63.686 0.0 0.0 5.9486 0.0 0.0 0.0 598.3234075458678 598.3234075458678 17.183021008258024 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.75 + {I|L}{I|L}DQ 5.9486 + + 332 + 1 1.772 44378.3 1.0 4761 4593 9350 HBL1_DMSO_200M_050219_2,9356 HBL1_DMSO_200M_050219_2,9356,ILDQKINEV True True ILDQKINEV 50.942111 536.306445300579 19684230.0 9350.0 ENST00000446285.5_1_2:10584646-10585158:-|nuORF;;ENSG00000115758|ENST00000234111|ODC1 3.836066961288452 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9357 50.943 24.0 2325700.0 25 0 362350.0 + 22030 LPPPPPPAM 9 71 458.751710776598 915.488868619996 2 458.7518188357353 MULTI CID FTMS 0 0 0 9350 2146860.75 0.4853991530851977 13 -1.2384757995605469 7 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP 6 3 49.698 0.0 0.0 5.4286 0.0 0.0 0.0 314.1178695284416 314.1178695284416 5.127881306118454 0.0 0.0 0.0 0 1.7302046884880935 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.4286 + + 331 1 1.772 49799.4 1.0 4762 4593 9350 HBL1_DMSO_200M_050219_2,9357 HBL1_DMSO_200M_050219_2,9357,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9358 50.944 24.0 2199000.0 25 0 308690.0 + 35075 SQVEDLERV 9 68 537.7751861185434 1073.535819303887 2 537.7753173708916 MULTI CID FTMS 0 0 0 9350 2067578.875 0.98795812196923 -1 0.1872406005859375 8 Unmodified _SQVEDLERV_ ENSG00000079616|ENST00000160827|KIF22;ENST00000568312.1_1_16:29815990-29816628:+|nuORF;nc|ENSG00000079616|Q14807-2|KIF22 38.61474834105838 0.0830609365873449 4 {[QS]|[NT]}VED{I|L}E[RV] 9 0 + 65.34 0.0 0.0 6.0864 6.0864 81.765 0.0 0.0 0.0 56.38743756437101 5.642492736872597 5.642492736872597 5.686362358410122 0 1.0 1.2218487496163564 0.4247425010840047 0.0 + + {[QS]|[NT]}VED{I|L}E[RV];{[SA]|[TG]}GVED{I|L}E[RV];{[QS]|[NT]}VVEEE[RV];{[SA]|[TG]}GVVEEE[RV] 6.0864;5.5567;4.6944;4.1648 +;-;-;- + 74 + 1 1.772 47105.9 1.0 4763 4593 9350 HBL1_DMSO_200M_050219_2,9358 HBL1_DMSO_200M_050219_2,9358,SQVEDLERV True True SQVEDLERV 50.944469 537.775317370892 15144594.0 9350.0 nc|ENSG00000079616|Q14807-2|KIF22;;ENSG00000079616|ENST00000160827|KIF22;;ENST00000568312.1_1_16:29815990-29816628:+|nuORF 5.903203805287679 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9359 50.946 46.0 1126400.0 25 0 123800.0 + 39148 TYLPAGQSV 9 87 468.245842095863 934.477131258526 2 468.2457153201103 MULTI CID FTMS 0 0 0 9350 1232218.0 0.82417405924626 -1 0.1872406005859375 9 Unmodified _TYLPAGQSV_ ENSG00000167085|ENST00000300408|PHB1;nc|ENSG00000167085|P35232-2|PHB1 34.10243960390752 0.1078313939113124 4 [YT]{I|L}Y 4 6 32.167 0.0 0.0 3.4422 0.0 0.0 0.0 391.1927434013573 391.1927434013573 9.793103260545372 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [YT]{I|L}Y 3.4422 - 110 1 1.772 47388.7 1.0 4764 4593 9350 HBL1_DMSO_200M_050219_2,9359 HBL1_DMSO_200M_050219_2,9359,TYLPAGQSV True True TYLPAGQSV 50.945721 468.24571532011 13122854.0 9350.0 ENSG00000167085|ENST00000300408|PHB1;;nc|ENSG00000167085|P35232-2|PHB1 5.619819323221843 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9360 50.947 55.0 780860.0 25 0 59641.0 + 32188 RVVDELDNQM 10 72 617.7902076725306 1233.5658624118612 2 617.7904540896416 MULTI CID FTMS 0 0 0 9350 1151125.0 0.5899822941245926 1 -0.0463104248046875 10 Oxidation (M) _RVVDELDNQM(Oxidation (M))_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 61.08992128646608 0.0337271188422265 4 DE{I|L}DNQ{M(Oxidation (M))|F} 7 3 80.081 0.0 0.0 6.4918 0.0 0.0 354.23835951972814 0.0 354.23835951972814 0.0 54.43413698268857 0.0 0.0 0 1.7302046884880935 0.0 0.4247425010840047 0.805462187404089 + DE{I|L}DNQ{M(Oxidation (M))|F} 6.4918 + + 87 1 1.772 38244.6 1.0 4765 4593 9350 HBL1_DMSO_200M_050219_2,9360 HBL1_DMSO_200M_050219_2,9360,RVVDELDNQM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9361 50.948 46.0 668260.0 25 0 64697.0 + 40320 VGYRWRAF 8 51 527.7820703978819 1053.5495878625636 2 528.2842895388603 MULTI CID FTMS 0 0 0 9350 1081456.5 0.652272762912987 1 -0.0463104248046875 11 Unmodified _VGYRWRAF_ REV__ENSG00000187021|ENST00000358834|PNLIPRP1 6.354104778181461 0.7857632046190106 4 {M(Oxidation (M))|F} 1 -1 12.764 0.0 0.0 1.2115 0.0 0.0 888.4705453594371 0.0 888.4705453594371 0.0 5.774509799928715 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2115 + + 20 + 1 1.772 28587.4 1.0 4766 4593 9350 HBL1_DMSO_200M_050219_2,9361 HBL1_DMSO_200M_050219_2,9361,VGYRWRAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9362 50.95 66.0 883160.0 25 0 72382.0 + 6584 EANPAVPEV 9 76 463.2347330252519 924.4549131173038 2 463.2348510622978 MULTI CID FTMS 0 0 0 9350 745568.625 0.8862374377673865 1 -0.0463104248046875 12 Unmodified _EANPAVPEV_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 92.4914307365334 0.0139747738690111 4 [EP]NAAV 6 5 51.437 0.0 0.0 5.564 0.0 0.0 0.0 340.1505057288851 340.1505057288851 31.05774396488271 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.8807196863200843 1.079689690656103 [EP]NAAV 5.564 - 386 1 1.772 49597.6 1.0 4767 4593 9350 HBL1_DMSO_200M_050219_2,9362 HBL1_DMSO_200M_050219_2,9362,EANPAVPEV True True EANPAVPEV 50.949965 463.234851062298 19134948.0 9350.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 6.76166582107544 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9363 50.952 71.0 903620.0 25 0 145330.0 + 11561 GIVTRVSEV 9 96 480.2810263203416 958.5474997074832 2 480.2798339724541 MULTI CID FTMS 0 0 0 9350 686782.5 0.9682392378798714 -1 0.1872406005859375 13 Unmodified _GIVTRVSEV_ ENSG00000166508|ENST00000303887|MCM7;ENST00000463722.5_1_7:99695745-99696843:-|nuORF;nc|ENSG00000166508|P33993-2|MCM7 36.506200033944 0.094635877243972 4 [TP]A[R{M(Oxidation (M))|F}]VVAV 9 6 + 35.626 0.0 0.0 3.7167 3.7167 79.178 0.0 0.0 0.0 2.06948844866681 14.974702404264026 2.06948844866681 13.252574989159957 0 0.2742275032520141 1.6989700043360187 0.0 0.3252574989159953 [TP]A[R{M(Oxidation (M))|F}]VVAV;[R{I|L}]TVVCVAV;{[TV]|[{I|L}S]}R{[ES]|[DT]|[{I|L}C]}VVAV;{[TV]|[{I|L}S]}R[VS]EVAV;[TP]A[{I|L}P][YK]AV;[R{I|L}]V{[TV]|[{I|L}S]}CVAV;[R{I|L}]TVV{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;[R{I|L}]V{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;[TP]A[R{M(Oxidation (M))|F}][R{I|L}]V;{[TV]|[{I|L}S]}R{[VA]|[{I|L}G]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AV 3.7167;2.3341;2.3102;2.1578;2.1504;2.0453;1.8253;1.5365;1.4014;1.3721 -;-;-;-;-;-;-;-;-;- 254 1 1.772 56470.0 1.0 4768 4593 9350 HBL1_DMSO_200M_050219_2,9363 HBL1_DMSO_200M_050219_2,9363,GIVTRVSEV True True GIVTRVSEV 50.951621 480.279833972454 5623907.0 9350.0 nc|ENSG00000166508|P33993-2|MCM7;;ENSG00000166508|ENST00000303887|MCM7;;ENST00000463722.5_1_7:99695745-99696843:-|nuORF 5.17072860399882 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9364 50.954 139.0 740860.0 25 0 215550.0 + 45666 YVSTKALSL 9 80 491.2852507007544 980.5559484683088 2 491.2861205935478 MULTI CID FTMS 0 0 0 9350 404359.0 1.0 0 0.0 14 Unmodified _YVSTKALSL_ REV__ENSG00000131951|ENST00000570145|LRRC9;REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9;REV__nc|ENSG00000131951|Q6ZRR7|LRRC9 16.942295170755138 0.3780752226737986 4 Q[C(Carbamidomethyl (C))C][YV]P{I|L} 7 -1 13.773 0.0 0.0 1.4046 0.0 0.0 99.1955050131573 0.0 99.1955050131573 0.0 1.2983414337053034 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 Q[C(Carbamidomethyl (C))C][YV]P{I|L} 1.4046 - 48 + 1 1.772 83578.2 1.0 4769 4593 9350 HBL1_DMSO_200M_050219_2,9364 HBL1_DMSO_200M_050219_2,9364,YVSTKALSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9365 50.957 97.0 459920.0 25 0 34534.0 + 25120 MQAPEQEMV 9 83 531.7338621521458 1061.4531713710917 2 531.7339355349541 MULTI CID FTMS 0 0 0 9350 353320.28125 1.0 0 0.0 15 Unmodified _MQAPEQEMV_ ENSG00000159217|ENST00000290341|IGF2BP1;nc|ENSG00000159217|Q9NZI8-2|IGF2BP1 17.11289562659939 0.3734572693229295 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[DS]|[MA]|[CV]|TT}QEVM 9 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[DS]|[MA]|[CV]|TT}QE + + 20.701 -1.2595 -0.15485 1.9503 1.9503 44.553 0.0 0.0 0.0 0.0 6.096981436199016 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[DS]|[MA]|[CV]|TT}QEVM 1.9503 - 173 + 1 1.772 39795.4 1.0 4770 4593 9350 HBL1_DMSO_200M_050219_2,9365 HBL1_DMSO_200M_050219_2,9365,MQAPEQEMV False True MQAPEQEMV 50.956527 531.733935534954 2430744.25 9350.0 ENSG00000159217|ENST00000290341|IGF2BP1;;nc|ENSG00000159217|Q9NZI8-2|IGF2BP1 4.0143043994903564 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9366 50.962 274.0 340230.0 25 0 41270.0 + 5962 DQLCISFHHFP 11 108 672.3141554862992 1342.6137580393984 2 672.3147460818291 MULTI CID FTMS 0 0 0 9350 348254.34375 0.6104719726522485 6 -0.4973106384277344 16 Unmodified _DQLCISFHHFP_ REV__ENST00000556103.1_1_14:23946657-23947232:+|nuORF 20.41453444215458 0.6105011870913812 4 {[QN]|[E{I|L}]|[KN]}NS{M(Oxidation (M))|F}SQ 7 -1 32.127 0.0 0.0 2.3928 0.0 0.0 0.0 534.2295166666046 534.2295166666046 -1.4053699908751227 0.0 -1.4053699908751227 0.0 0 0.0 0.0 2.0356668758921828 0.0 {[QN]|[E{I|L}]|[KN]}NS{M(Oxidation (M))|F}SQ 2.3928 - 667 1 1.772 75988.8 1.0 4771 4593 9350 HBL1_DMSO_200M_050219_2,9366 HBL1_DMSO_200M_050219_2,9366,DQLCISFHHFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9367 50.967 278.0 213550.0 25 0 18041.0 + 101 AAIGALQEA 9 109 422.2319123625967 842.4492717919934 2 422.2313720583916 MULTI CID FTMS 0 0 0 9350 239983.625 0.4121274191732396 1 -0.0463104248046875 17 Unmodified _AAIGALQEA_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000268799|ENST00000600799|H3Y2;ENSG00000269466|ENST00000598383|H3Y1;ENST00000497682.1_1_3:109128527-109128830:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF 26.34127834903884 0.1960301806784604 4 AAVAA{I|L} 6 5 26.375 0.0 0.0 3.1308 0.0 0.0 0.0 343.1248448723247 343.1248448723247 10.890625187447966 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 AAVAA{I|L} 3.1308 - 129 1 1.772 55046.4 1.0 4772 4593 9350 HBL1_DMSO_200M_050219_2,9367 HBL1_DMSO_200M_050219_2,9367,AAIGALQEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9368 50.97 166.0 395190.0 25 0 43645.0 + 40669 SPQGRVMTI 9 113 494.75052460241136 987.4864962716229 2 494.7481567263603 MULTI CID FTMS 0 0 0 9350 166050.984375 0.4852779527704315 -2 0.3433647155761719 18 Unmodified _VLETAENVN_ ENSG00000169564|ENST00000303577|PCBP1 18.13498045792455 0.3457906370836843 4 [{I|L}V]DDS 5 7 20.686 0.0 0.0 2.0949 0.0 0.0 0.0 455.224325211329 455.224325211329 6.222412206649466 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.0 [{I|L}V]DDS 2.0949 - 173 1 1.772 53015.4 1.0 4773 4593 9350 HBL1_DMSO_200M_050219_2,9368 HBL1_DMSO_200M_050219_2,9368,VLETAENVN False False SPQGRVMTI 50.969956 494.74815672636 1181860.0 9350.0 ENSG00000169564|ENST00000303577|PCBP1 1.0583725372950237 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9369 50.973 178.0 348990.0 25 0 36249.0 + 16107 ITSPELRSV 9 91 501.28599741657376 1000.5574418999475 2 501.2855712771416 MULTI CID FTMS 0 0 0 9350 174928.421875 0.795270452514328 -1 0.1872406005859375 19 Unmodified _ITSPELRSV_ ENSG00000132109|ENST00000254436|TRIM21;nc|ENSG00000132109|P19474-2|TRIM21 23.78978130925829 0.2284941198415988 4 {I|L}TSPE[RV]TV 9 2 + 61.987 0.0 0.0 6.1952 6.1952 74.024 0.0 0.0 0.0 42.02153808136547 0.2209357236288056 0.2209357236288056 0.7255066714861158 0 0.3807196863200844 2.0 0.0 0.0 {I|L}TSPE[RV]TV;{I|L}TSPE[R{I|L}]SV;{I|L}TSPE[RV]S{I|L};{I|L}TSP[YK]PPV;{I|L}TS[KA]{[QG]|[NA]}TPV;{I|L}TS[KA]{[QG]|[NA]}PTV;{I|L}TS[KA]{[QG]|[NA]}PS{I|L};{I|L}TS[QA][KG]TPV;{I|L}TS[QA][KG]PTV;{I|L}TS[QA][KG]PS{I|L} 6.1952;6.1227;6.057;5.425;4.6416;4.4581;4.3199;4.1274;3.9439;3.8057 -;+;-;-;-;-;-;-;-;- + 438 + 1 1.772 53697.4 1.0 4774 4593 9350 HBL1_DMSO_200M_050219_2,9369 HBL1_DMSO_200M_050219_2,9369,ITSPELRSV False True ITSPELRSV 50.973394 501.285571277142 3063350.5 9350.0 ENSG00000132109|ENST00000254436|TRIM21;;nc|ENSG00000132109|P19474-2|TRIM21 4.198289553324382 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9370 50.978 239.0 308990.0 25 0 27263.0 + 35402 STHEFLHEV 9 111 549.7647024235949 1097.5148519139898 2 549.7650634646416 MULTI CID FTMS 0 0 0 9350 162910.390625 0.5356743581370391 -2 0.3433647155761719 20 Unmodified _STHEFLHEV_ ENSG00000215305|ENST00000380445|VPS16 32.037481411007896 0.1235546156350648 4 V{M(Oxidation (M))|F}H{I|L}{M(Oxidation (M))|F}ESE 8 6 55.386 0.0 0.0 5.0465 0.0 0.0 0.0 106.04163538150624 106.04163538150624 33.78221994357176 0.0 0.0 0.0 0 1.274227503252014 0.0 0.3494850021680094 0.0 V{M(Oxidation (M))|F}H{I|L}{M(Oxidation (M))|F}ESE 5.0465 - 189 + 1 1.772 59481.6 1.0 4775 4593 9350 HBL1_DMSO_200M_050219_2,9370 HBL1_DMSO_200M_050219_2,9370,STHEFLHEV True True STHEFLHEV 50.977882 549.765063464642 5583012.25 9350.0 ENSG00000215305|ENST00000380445|VPS16 7.356124401092529 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9372 50.994 800.0 204500.0 25 0 26044.0 -1 VANPQMRPVCL 11 127 650.8293764839337 1299.6442000346674 2 650.8293945193291 MULTI CID FTMS 0 0 0 9371 204683.59375 1.0 0 0.0 1 Carbamidomethyl (C),Oxidation (M) _VANPQM(Oxidation (M))RPVC(Carbamidomethyl (C))L_ ENST00000583444.1_1_17:80189502-80189688:+|nuORF 10.073929032068715 0.8255972128077141 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}Y[Y{I|L}]AV{[QG]|[NA]} 11 -1 + 48.785 0.0 0.0 3.7537 3.7537 71.712 0.0 0.0 0.0 8.159398112730436 7.367585652254185 7.367585652254185 4.771212547196626 0 0.8807196863200843 1.5228787452803376 0.4247425010840047 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}Y[Y{I|L}]AV{[QG]|[NA]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM}K[Y{I|L}]AV{[QG]|[NA]};{[VA]|[{I|L}G]}[YG]PY[Y{I|L}]AV{[QG]|[NA]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ET]|[MV]}[W{I|L}]HAV{[QG]|[NA]};[QP][YV]Y[Y{I|L}]AV{[QG]|[NA]};[QP][C(Carbamidomethyl (C))H]K[Y{I|L}]AV{[QG]|[NA]};[QP][HQ][W{I|L}]HAV{[QG]|[NA]};[{M(Oxidation (M))|F}E][DV][W{I|L}]HA{[{M(Oxidation (M))|F}H]|[RQ]} 3.7537;3.3866;3.1259;2.6304;1.7525;1.3854;0.62919;0.10468 -;-;-;-;-;-;-;- 212 1 1.772 122228.6 0.75 4776 4594 9371 HBL1_DMSO_200M_050219_2,9372 HBL1_DMSO_200M_050219_2,9372,VANPQMRPVCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9373 50.999 248.0 422060.0 25 0 46772.0 + 42424 VTEQSYGQ 8 119 456.2109034405081 910.407253947816 2 456.2108032107353 MULTI CID FTMS 0 0 0 9371 227685.484375 1.0 0 0.0 2 Unmodified _VTEQSYGQ_ REV__ENSG00000214929|ENST00000344803|SPATA31D1 12.531546534597751 0.7257836412119636 4 [{I|L}T]K{I|L} 4 -1 25.111 0.0 0.0 2.7583 0.0 0.0 0.0 452.07723727912713 452.07723727912713 0.7137278017876127 0.0 0.0 0.0 0 0.0 2.0 0.1923877696554315 0.0 [{I|L}T]K{I|L} 2.7583 - 355 1 1.772 84598.9 1.0 4777 4594 9371 HBL1_DMSO_200M_050219_2,9373 HBL1_DMSO_200M_050219_2,9373,VTEQSYGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9374 51.012 800.0 327790.0 25 0 31513.0 + 37056 TGFSPRQI 8 204 453.2455627525363 904.4765725718726 2 453.2459289431572 MULTI CID FTMS 0 0 0 9371 176482.34375 0.0045389756142864 -7 0.4995880126953125 3 Unmodified _TGFSPRQI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 88.90359156742426 0.0528693370567628 4 TG{I|L}Q{I|L}SAD 8 6 70.191 0.0 0.0 7.7604 0.0 0.0 0.0 116.0510042779906 116.0510042779906 56.21168866306597 0.0 0.0 0.0 0 2.138832692265369 1.3979400086720375 1.173877368056628 0.0 TG{I|L}Q{I|L}SAD 7.7604 - 562 + 1 1.772 200440.3 0.7099999785423279 4778 4594 9371 HBL1_DMSO_200M_050219_2,9374 HBL1_DMSO_200M_050219_2,9374,TGFSPRQI True True TGFSPRQI 51.012463 453.245928943157 1856951200.0 9371.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 5.82091490427653 2.0 True 8.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9375 51.026 800.0 170980.0 25 0 17216.0 + 7808 ELINMLEMI 9 170 553.2832351958685 1104.551917458537 2 553.2837402224541 MULTI CID FTMS 0 0 0 9371 171545.34375 0.9820131404352148 -2 0.233551025390625 4 Unmodified _ELINMLEMI_ REV__ENST00000424783.1_1_2:99718519-99719212:+|nuORF 21.74664581756881 0.2544899275067181 4 YV{M(Oxidation (M))|F}ATT{I|L}KY 9 -1 + 81.439 0.0 0.0 7.373 7.373 61.476 0.0 0.0 0.0 0.0 14.313637641589864 0.0 0.0 0 0.805462187404089 2.0 0.2742275032520141 0.2742275032520141 YV{M(Oxidation (M))|F}ATT{I|L}KY;VY{M(Oxidation (M))|F}ATT{I|L}KY;YV{M(Oxidation (M))|F}V{[WT]|[RM]}KY;VY{M(Oxidation (M))|F}V{[WT]|[RM]}KY;YV{M(Oxidation (M))|F}V{[CA]|SS}{I|L}KY;VY{M(Oxidation (M))|F}V{[CA]|SS}{I|L}KY;YV{M(Oxidation (M))|F}ATT{I|L}YK;VY{M(Oxidation (M))|F}ATT{I|L}YK;VY{M(Oxidation (M))|F}V{[WT]|[RM]}YK;YV{M(Oxidation (M))|F}V{[WT]|[RM]}YK 7.373;7.373;6.6899;6.6899;6.3336;6.3336;6.0771;6.0771;5.3941;5.3941 -;-;-;-;-;-;-;-;-;- 1645 + 1 1.772 106677.5 0.8100000023841858 4779 4594 9371 HBL1_DMSO_200M_050219_2,9375 HBL1_DMSO_200M_050219_2,9375,ELINMLEMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9376 51.04 800.0 157270.0 25 0 7926.5 39647 VEAELLPQCWE 11 137 658.8119723534222 1315.6093917736443 2 658.8121826052666 MULTI CID FTMS 0 0 0 9371 155318.546875 1.0 0 0.0 5 Unmodified _VEAELLPQCWE_ ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH;nc|ENSG00000134444|Q9P260|RELCH 21.53697664764585 0.586507868110548 4 {NN|[MP]|[D{I|L}]|[EV]}AEV{I|L} 6 6 41.45 0.0 0.0 3.1507 0.0 0.0 0.0 672.2427895610068 672.2427895610068 11.317818051233957 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.2856668758921828 0.0 {NN|[MP]|[D{I|L}]|[EV]}AEV{I|L} 3.1507 - 1363 1 1.772 94164.5 0.7699999809265137 4780 4594 9371 HBL1_DMSO_200M_050219_2,9376 HBL1_DMSO_200M_050219_2,9376,VEAELLPQCWE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9377 51.047 401.0 249070.0 25 0 14601.0 + 2157 APYRQHGH 8 126 483.23900180827184 964.4634506833436 2 483.2390930056572 MULTI CID FTMS 0 0 0 9371 120955.984375 0.3902508163011187 -5 0.4500579833984375 6 Unmodified _APYRQHGH_ REV__ENST00000541245.1_2_17:38334535-38337880:+|nuORF 26.34127834903884 0.4900704351052977 4 APYV 4 -1 55.918 0.0 0.0 5.7978 0.0 0.0 0.0 531.2183931940061 531.2183931940061 32.98577533287428 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 APYV 5.7978 - 384 + 1 1.772 80211.7 1.0 4781 4594 9371 HBL1_DMSO_200M_050219_2,9377 HBL1_DMSO_200M_050219_2,9377,APYRQHGH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9378 51.061 800.0 94134.0 25 0 8349.0 26025 NLYSGDYYRIQ 11 110 696.331084108296 1390.6476152833918 2 696.3307372927666 MULTI CID FTMS 0 0 0 9371 114445.5390625 1.0 0 0.0 7 Unmodified _NLYSGDYYRIQ_ ENSG00000162733|ENST00000367921|DDR2 40.23920728925047 0.2087110615831976 4 {[QV]|[N{I|L}]|[RA]|[KV]}DAD{[DS]|[MA]|[CV]|TT}[RN]M{I|L}Q 12 6 {[QV]|[N{I|L}]|[RA]|[KV]} + + 54.993 25.713 11.321 3.9545 3.9545 48.54 0.0 0.0 0.0 0.0 30.68444640878993 0.0 0.0 0 1.6382104921644451 0.0 0.3054621874040891 1.0941876774005248 {[QV]|[N{I|L}]|[RA]|[KV]}DAD{[DS]|[MA]|[CV]|TT}[RN]M{I|L}Q 3.9545 - 659 + 1 1.772 62891.0 0.6600000262260437 4782 4594 9371 HBL1_DMSO_200M_050219_2,9378 HBL1_DMSO_200M_050219_2,9378,NLYSGDYYRIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9380 51.066 35.0 930440.0 25 0 74128.0 + 32197 RVVDELDNQM 10 59 609.7928654394397 1217.5711779456792 2 609.7932006716728 MULTI CID FTMS 0 0 0 9379 1131592.5 0.0457121692935314 3 -0.2595100402832031 1 Unmodified _RVVDELDNQM_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 30.7034409873982 0.2788461460996952 4 DE{I|L}DNQM 7 3 58.532 0.0 0.0 4.8072 0.0 0.0 354.23777968574376 0.0 354.23777968574376 0.0 43.073966871812885 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 + DE{I|L}DNQM 4.8072 + + 74 1 1.772 30636.5 1.0 4783 4595 9379 HBL1_DMSO_200M_050219_2,9380 HBL1_DMSO_200M_050219_2,9380,RVVDELDNQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9381 51.067 59.0 1018600.0 25 0 131410.0 + 35836 SVLDERLTV 9 80 516.2899223805719 1030.5652918279436 2 516.2910034060478 MULTI CID FTMS 0 0 0 9379 436466.3125 0.4729837629561599 2 -0.1540870666503906 2 Unmodified _SVLDERLTV_ REV__ENSG00000115355|ENST00000436346|CCDC88A;REV__ENST00000468534.1_1_2:55559700-55561478:-|nuORF;REV__nc|ENSG00000115355|Q3V6T2-2|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-3|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-4|CCDC88A;REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A 25.399314129420983 0.2080152500878129 4 TV 2 -1 22.691 0.0 0.0 2.2018 0.0 0.0 812.4383214683718 0.0 812.4383214683718 0.0 7.769250191953674 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 TV 2.2018 + + 74 + 1 1.772 52203.2 1.0 4784 4595 9379 HBL1_DMSO_200M_050219_2,9381 HBL1_DMSO_200M_050219_2,9381,SVLDERLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9382 51.069 60.0 1199300.0 25 0 224350.0 26159 NPYLVRRI 8 81 515.8112729690971 1029.607993004994 2 515.8116943240166 MULTI CID FTMS 0 0 0 9379 626268.5 0.5271463956982758 -2 0.1296768188476562 3 Unmodified _NPYLVRRI_ ENSG00000149480|ENST00000278823|MTA2;ENST00000526844.1_1_11:62365783-62368922:-|nuORF 21.74664581756881 0.5868176546531598 4 TV 2 7 18.227 0.0 0.0 1.7703 0.0 0.0 811.480961610266 0.0 811.480961610266 0.0 0.5237875363565792 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 TV 1.7703 - 54 + 1 1.772 60358.1 1.0 4785 4595 9379 HBL1_DMSO_200M_050219_2,9382 HBL1_DMSO_200M_050219_2,9382,NPYLVRRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9383 51.071 124.0 479710.0 25 0 56427.0 + 35403 STHEFLHEV 9 102 366.8456100787008 1097.5150008363023 3 366.8452331423759 MULTI CID FTMS 0 0 0 9379 474734.46875 1.0 0 0.0 4 Unmodified _STHEFLHEV_ ENSG00000215305|ENST00000380445|VPS16 45.739877483867886 0.0497104363764649 4 STHE{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F} 9 3 + 45.428 0.0 0.0 4.1392 4.1392 82.193 0.0 0.0 0.0 11.02423752401738 6.866229319949937 6.866229319949937 23.723637474483468 0 1.3494850021680094 0.0 0.3807196863200844 0.0 STHE{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F};ST{[NV]|[RG]}{[CP]|[EA]}{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F};[H{I|L}][{M(Oxidation (M))|F}V]MHEW;S[{M(Oxidation (M))|F}V]HMK[HN]V;S[WK]{[CP]|[EA]}{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F};S[WQ]{[CP]|[EA]}{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F};S[{M(Oxidation (M))|F}V]H{I|L}{M(Oxidation (M))|F}YSV;[HT][RN]{M(Oxidation (M))|F}[HT]W;{[CT]|[{M(Oxidation (M))|F}G]}EH{I|L}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}V;ST{[NV]|[RG]}[WH]HA{M(Oxidation (M))|F} 4.1392;1.9776;1.7668;1.4459;1.3824;1.3824;1.3168;1.0608;0.75256;0.4661 -;-;-;-;-;-;-;-;-;- 551 + 1 1.772 54080.1 1.0 4786 4595 9379 HBL1_DMSO_200M_050219_2,9383 HBL1_DMSO_200M_050219_2,9383,STHEFLHEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9384 51.075 219.0 466430.0 25 0 45890.0 + 2848 AVARGLPGV 9 106 420.2585821253565 838.502611317513 2 420.2583190798759 MULTI CID FTMS 0 0 0 9379 369742.0 0.3091863143943036 -3 0.3169174194335937 5 Unmodified _AVARGLPGV_ ENST00000373087.6_1_1:37940193-37941091:+|nuORF 48.345845343767074 0.0439967357579942 4 {[VA]|[{I|L}G]}ARG{I|L}PGV 9 0 + 44.234 0.0 0.0 5.2753 5.2753 74.658 0.0 0.0 0.0 19.416736752049164 29.01705953840028 19.416736752049164 3.0102999566398125 0 1.666297237961671 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}ARG{I|L}PGV;{[VA]|[{I|L}G]}ARAVPGV;{[VA]|[{I|L}G]}ARGP{I|L}GV;{[VA]|[{I|L}G]}ARAPVGV 5.2753;4.9163;4.2044;4.11 +;-;-;- + 142 1 1.772 85301.1 1.0 4787 4595 9379 HBL1_DMSO_200M_050219_2,9384 HBL1_DMSO_200M_050219_2,9384,AVARGLPGV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9385 51.078 103.0 569130.0 25 0 29949.0 + 16525 KARSPYKTL 9 102 532.3161949557227 1062.6178369782454 2 532.3162719607353 MULTI CID FTMS 0 0 0 9379 375047.8125 1.0 0 0.0 6 Unmodified _KARSPYKTL_ REV__ENST00000589903.1_1_19:20025588-20026102:+|nuORF 26.268140514670165 0.1969607489560049 4 {I|L}KT{I|L} 4 -1 43.686 0.0 0.0 4.1111 0.0 0.0 589.2968006818375 0.0 589.2968006818375 0.0 30.92141542771227 0.0 0.0 0 1.174742501084005 0.0 0.0 0.0 {I|L}KT{I|L} 4.1111 - 248 1 1.772 49990.5 1.0 4788 4595 9379 HBL1_DMSO_200M_050219_2,9385 HBL1_DMSO_200M_050219_2,9385,KARSPYKTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9386 51.081 183.0 544240.0 25 0 68490.0 + 21280 LPEDKPRLI 9 119 360.88556629443656 1079.6348694835096 3 360.8848754763603 MULTI CID FTMS 0 0 0 9379 326960.78125 0.0517633071205961 12 -1.2026405334472656 7 Unmodified _LPEDKPRLI_ ENSG00000151576|ENST00000281273|QTRT2;ENST00000462869.1_1_3:113795697-113801401:+|nuORF;nc|ENSG00000151576|Q9H974-2|QTRT2;nc|ENSG00000151576|Q9H974-3|QTRT2;nc|ENSG00000151576|Q9H974-4|QTRT2 16.149105407346934 0.3995459350917656 4 {I|L}PEDKP 6 3 53.11 0.0 0.0 4.9193 0.0 0.0 0.0 397.2576387994751 397.2576387994751 27.704262829037845 0.0 0.0 0.0 0 0.1747425010840047 0.7958800173440752 0.4247425010840047 0.0 + {I|L}PEDKP 4.9193 + + 132 + 1 1.772 91474.6 1.0 4789 4595 9379 HBL1_DMSO_200M_050219_2,9386 HBL1_DMSO_200M_050219_2,9386,LPEDKPRLI False True LPEDKPRLI 51.081214 360.88487547636 347914140.0 9379.0 ENST00000462869.1_1_3:113795697-113801401:+|nuORF;;nc|ENSG00000151576|Q9H974-3|QTRT2;;ENSG00000151576|ENST00000281273|QTRT2;;nc|ENSG00000151576|Q9H974-4|QTRT2;;nc|ENSG00000151576|Q9H974-2|QTRT2 5.110887368520101 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9387 51.085 176.0 474740.0 25 0 86362.0 + 15402 IPPDQQRLI 9 86 540.3146414642733 1078.6147299953466 2 540.3144409060478 MULTI CID FTMS 0 0 0 9379 309939.3125 0.0125326108809376 -14 0.9561233520507812 8 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 13.042465956692816 0.4836390050082244 4 {I|L}PPD 4 5 51.414 0.0 0.0 4.7667 0.0 0.0 0.0 653.3732508912389 653.3732508912389 40.57695728733573 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPD 4.7667 + + 73 + 1 1.772 72536.4 1.0 4790 4595 9379 HBL1_DMSO_200M_050219_2,9387 HBL1_DMSO_200M_050219_2,9387,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9388 51.09 307.0 420730.0 25 0 55982.0 + 361 AECYMNHRFY 10 116 667.2755968390868 1332.5366407449735 2 667.2753784060478 MULTI CID FTMS 0 0 0 9379 276142.53125 0.5671197089569318 -2 0.1296768188476562 9 Unmodified _AECYMNHRFY_ REV__ENSG00000148985|ENST00000278243|PGAP2;REV__ENST00000490830.5_1_11:3845682-3846685:+|nuORF;REV__nc|ENSG00000148985|Q9UHJ9-3|PGAP2;REV__nc|ENSG00000148985|Q9UHJ9-5|PGAP2;REV__nc|ENSG00000148985|Q9UHJ9|PGAP2 13.90604991867851 0.6142120002215601 4 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 92.049 0.0 0.0 6.9078 0.0 0.0 248.0909138410172 0.0 248.0909138410172 0.0 55.69147610517376 0.0 0.0 0 1.305462187404089 0.0 1.031234684152075 1.610924374808178 DEAQQNA{M(Oxidation (M))|F}Y 6.9078 - 8094 1 1.772 96017.5 1.0 4791 4595 9379 HBL1_DMSO_200M_050219_2,9388 HBL1_DMSO_200M_050219_2,9388,AECYMNHRFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9389 51.094 201.0 334220.0 25 0 63785.0 + 24912 MPPDPRPTL 9 76 512.2682993912351 1022.5220458492704 2 512.2687255740166 MULTI CID FTMS 0 0 0 9379 273428.8125 0.5506797555130774 6 -0.5801467895507812 10 Unmodified _MPPDPRPTL_ ENST00000465017.5_1_9:139685822-139687379:+|nuORF;ENST00000483187.5_1_9:139685862-139687379:+|nuORF 21.53697664764585 0.2571576504437394 4 MPPDA 5 5 59.38 0.0 0.0 5.8072 0.0 0.0 0.0 508.2766207330688 508.2766207330688 40.96401568399578 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 MPPDA 5.8072 - 85 + 1 1.772 60646.8 1.0 4792 4595 9379 HBL1_DMSO_200M_050219_2,9389 HBL1_DMSO_200M_050219_2,9389,MPPDPRPTL False True MPPDPRPTL 51.09412 512.268725574017 28155618.0 9379.0 ENST00000483187.5_1_9:139685862-139687379:+|nuORF;;ENST00000465017.5_1_9:139685822-139687379:+|nuORF 5.8665397961934405 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9390 51.097 161.0 330100.0 25 0 34455.0 + 20888 LMPTGLPEL 9 81 485.7687766167918 0 485.7719604372978 PEAK CID FTMS 0 0 0 9379 263821.71875 0.108108867793186 40 -3.221782684326172 11 Unmodified _LMPTGLPEL_ REV__ENSG00000148200|ENST00000487099|NR6A1;REV__nc|ENSG00000148200|Q15406-2|NR6A1;REV__nc|ENSG00000148200|Q15406-3|NR6A1;REV__nc|ENSG00000148200|Q15406-4|NR6A1;REV__nc|ENSG00000148200|Q15406-5|NR6A1 23.1484247019978 0.1725298825155634 4 PP 2 -1 15.217 0.0 0.0 1.5695 0.0 0.0 147.06053796197438 625.3306368463499 772.3911748083242 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PP 1.5695 - 49 + 1 1.772 43986.7 1.0 4793 4595 9379 HBL1_DMSO_200M_050219_2,9390 HBL1_DMSO_200M_050219_2,9390,LMPTGLPEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9391 51.103 293.0 432300.0 25 0 41808.0 38680 TTLKEKLHKS 10 154 395.57274167745743 1183.6963956325724 3 395.5727111697197 MULTI CID FTMS 0 0 0 9379 235499.375 0.4925922066947485 -2 0.1296768188476562 12 Unmodified _TTLKEKLHKS_ ENSG00000197980|ENST00000356539|LEKR1 27.088373467376528 0.3600710273140457 4 TT{I|L}KY[R{M(Oxidation (M))|F}]KK 9 5 + 77.858 0.0 0.0 6.5776 6.5776 81.81 0.0 0.0 0.0 39.72234667441434 6.923487412610356 6.923487412610356 4.151051905782495 0 0.7302046884880937 1.5228787452803376 0.0 0.8494850021680094 TT{I|L}KY[R{M(Oxidation (M))|F}]KK;TT{I|L}KY[RK]{M(Oxidation (M))|F}K;[{I|L}T][H{I|L}]{I|L}YK{I|L}[PS];TT{I|L}KY{I|L}[H{I|L}][VP];TT{I|L}K{[HG]|PP}V[PG]{M(Oxidation (M))|F}K;TT{I|L}K[RP][{I|L}A]{[RE]|[WV]};TT{I|L}K{[HG]|PP}[RP]{M(Oxidation (M))|F}K;TT{I|L}K[RP][K{I|L}]{NN|[MP]|[D{I|L}]|[EV]};KK[HA]{I|L}YK{I|L}[PS];[VG]YKV{[HG]|PP}K{I|L}[PS] 6.5776;6.2269;5.6959;5.4115;4.6224;4.3691;4.3212;4.0854;3.3811;3.164 -;-;-;-;-;-;-;-;-;- 463 + 1 1.772 106206.1 1.0 4794 4595 9379 HBL1_DMSO_200M_050219_2,9391 HBL1_DMSO_200M_050219_2,9391,TTLKEKLHKS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9392 51.107 255.0 273920.0 25 0 27005.0 + + 19859 HLPPTFHAV 9 109 509.7787027148058 1017.5428524964116 2 509.7786132693291 MULTI CID FTMS 0 0 0 9379 231239.125 0.2155475088468936 3 -0.2595100402832031 13 Unmodified _LHLPTMGHL_ nc|ENSG00000105808|O43374-2|RASA4;ENST00000523568.1_7:102240831-102257136:-|nuORF;ENST00000427076.5_1_7:44005990-44026228:-|nuORF;ENSG00000105808|ENST00000262940|RASA4;ENST00000522443.1_7:102249007-102257136:-|nuORF;ENSG00000170667|ENST00000465829|RASA4B;ENST00000454572.1_1_7:44005962-44058742:-|nuORF;ENST00000521892.1_7:102249786-102257136:-|nuORF 24.67388899826682 0.2172451872415813 4 [H{I|L}]P 3 -1 31.21 0.0 0.0 3.0672 0.0 0.0 0.0 667.3191012018186 667.3191012018186 -1.2884730423637336 0.0 -1.2884730423637336 0.0 0 0.4247425010840047 2.0 0.0 0.0 [H{I|L}]P 3.0672 + + 389 + 1 1.772 58761.2 1.0 4795 4595 9379 HBL1_DMSO_200M_050219_2,9392 HBL1_DMSO_200M_050219_2,9392,LHLPTMGHL False False HLPPTFHAV 51.107376 509.778613269329 8588416.0 9379.0 nc|ENSG00000105808|O43374-2|RASA4;;ENST00000523568.1_7:102240831-102257136:-|nuORF;;ENST00000427076.5_1_7:44005990-44026228:-|nuORF;;ENSG00000105808|ENST00000262940|RASA4;;ENST00000522443.1_7:102249007-102257136:-|nuORF;;ENSG00000170667|ENST00000465829|RASA4B;;ENST00000454572.1_1_7:44005962-44058742:-|nuORF;;ENST00000521892.1_7:102249786-102257136:-|nuORF 6.668164094289144 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9393 51.112 232.0 371480.0 25 0 30046.0 + 28835 QAETDSGKQLQ 11 110 402.1984341364642 1203.5734730095926 3 402.1989318728447 MULTI CID FTMS 0 0 0 9379 181730.21875 0.6043896392847804 -3 0.3169174194335937 14 Unmodified _QAETDSGKQLQ_ REV__ENSG00000143624|ENST00000318967|INTS3;REV__nc|ENSG00000143624|Q68E01-3|INTS3;REV__nc|ENSG00000143624|Q68E01-4|INTS3;REV__nc|ENSG00000143624|Q68E01|INTS3 5.731851221503515 0.8481046878870278 4 P{I|L}V{I|L}ER 6 -1 28.888 0.0 0.0 2.4002 0.0 0.0 478.1292113902551 0.0 478.1292113902551 0.0 19.28363000283607 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.2742275032520141 P{I|L}V{I|L}ER 2.4002 - 82 + 1 1.772 69395.9 1.0 4796 4595 9379 HBL1_DMSO_200M_050219_2,9393 HBL1_DMSO_200M_050219_2,9393,QAETDSGKQLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9394 51.126 800.0 426810.0 25 0 54889.0 -1 0 178 406.7896226408049 811.5646923484097 2 406.7894470095634 MULTI CID FTMS 0 0 0 9379 174933.484375 0.1861672465431726 -3 0.3169174194335937 15 4 {I|L}G{I|L}KR{I|L}{I|L} 7 -1 + 62.811 0.0 0.0 7.7395 7.7395 94.364 0.0 0.0 0.0 39.97566764306864 9.651440529607648 9.651440529607648 16.03871964321762 0 1.1237125054200234 0.5528419686577808 0.0 0.75 {I|L}G{I|L}KR{I|L}{I|L};{I|L}{I|L}GKR{I|L}{I|L};{I|L}G{I|L}{I|L}[RK]{I|L};{I|L}G{I|L}{I|L}[R{I|L}]K;{I|L}{I|L}RKG{I|L}{I|L};{I|L}{I|L}G{I|L}[RK]{I|L};{I|L}{I|L}RKVA{I|L};{I|L}{I|L}G{I|L}[R{I|L}]K;{I|L}{I|L}RKV{I|L}A;[K{I|L}][R{I|L}]G{I|L}{I|L} 7.7395;5.7632;5.5098;4.209;3.5646;3.5335;3.0228;2.2328;2.2212;1.3436 -;-;-;-;-;-;-;-;-;- 223 + 1 1.772 260509.6 0.6299999952316284 4797 4595 9379 HBL1_DMSO_200M_050219_2,9394 HBL1_DMSO_200M_050219_2,9394, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9395 51.141 800.0 355540.0 25 0 17995.0 + 6450 EAFEHPNVV 9 220 521.2533155916685 1040.492078250137 2 521.2536498904228 MULTI CID FTMS 0 0 0 9379 147420.234375 0.0657294085131754 -3 0.3169174194335937 16 Unmodified _EAFEHPNVV_ ENSG00000135446|ENST00000257904|CDK4;ENST00000551706.1_1_12:58145281-58145962:-|nuORF 114.6490535036381 0.0036024293994099 4 EA{M(Oxidation (M))|F}EH[NP]VV 9 0 + 68.937 0.0 0.0 6.6254 6.6254 86.173 0.0 0.0 0.0 29.662293636413903 16.47817481888638 16.47817481888638 8.0178267316264 0 1.4461831641420693 2.0 0.2396518287104437 0.9559771852360796 + + EA{M(Oxidation (M))|F}EH[NP]VV;EA{M(Oxidation (M))|F}EH{[NV]|[RG]}PV;EA{M(Oxidation (M))|F}EH[Q{I|L}]AP;EA{M(Oxidation (M))|F}EH{[NV]|[RG]}VP;{[YC]|[HE]}{M(Oxidation (M))|F}AE[NP]VV;EA{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}GV;EA{M(Oxidation (M))|F}EH[KP]SP;Y[PS]EH[NP]VV;[NP]VCAE[NP]VV;{[YC]|[HE]}{M(Oxidation (M))|F}[PG]G{[CP]|[EA]}VV 6.6254;5.8549;4.0548;4.0295;4.0289;3.8648;3.8047;3.6793;3.6081;3.4473 +;-;-;-;-;-;-;-;-;- + 7563 + 1 1.772 240004.7 0.6700000166893005 4798 4595 9379 HBL1_DMSO_200M_050219_2,9395 HBL1_DMSO_200M_050219_2,9395,EAFEHPNVV True True EAFEHPNVV 51.140545 521.253649890423 36405176.0 9379.0 ENSG00000135446|ENST00000257904|CDK4;;ENST00000551706.1_1_12:58145281-58145962:-|nuORF 7.720678488413493 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9396 51.148 439.0 481660.0 25 0 20407.0 + -1 SLHIPLCPL 9 190 350.53115277974257 1048.5716289394277 3 350.5309020876884 MULTI CID FTMS 0 0 0 9379 130594.8828125 1.0 0 0.0 17 Carbamidomethyl (C) _SLHIPLC(Carbamidomethyl (C))PL_ REV__nc|ENSG00000156345|Q8IZL9-2|CDK20;REV__nc|ENSG00000156345|Q8IZL9-3|CDK20 14.40537977576856 0.4467465336100671 4 {[TV]|[{I|L}S]}H{I|L}VKY 7 -1 38.272 0.0 0.0 3.6499 0.0 0.0 0.0 205.065435896898 205.065435896898 22.51110952351388 0.0 0.0 0.0 0 0.91944517631652 1.6989700043360187 0.0 0.5 {[TV]|[{I|L}S]}H{I|L}VKY 3.6499 - 284 1 1.772 174805.1 1.0 4799 4595 9379 HBL1_DMSO_200M_050219_2,9396 HBL1_DMSO_200M_050219_2,9396,SLHIPLCPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9397 51.155 385.0 342500.0 25 0 16640.0 + 44683 RPYEKGRLII 10 133 415.9084068990424 1244.703391297327 3 415.9079467654228 MULTI CID FTMS 0 0 0 9379 100372.8671875 0.2143872915294595 -9 0.6010246276855469 18 Unmodified _YPFKPPKVRN_ nc|ENSG00000086061|P31689-2|DNAJA1;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;ENSG00000086061|ENST00000330899|DNAJA1 12.174745833636583 0.6432616012102976 4 YPQQAA{I|L} 7 8 37.911 0.0 0.0 3.0458 0.0 0.0 0.0 470.27347462206126 470.27347462206126 17.020082085180945 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 YPQQAA{I|L} 3.0458 - 445 + 1 1.772 108307.6 1.0 4800 4595 9379 HBL1_DMSO_200M_050219_2,9397 HBL1_DMSO_200M_050219_2,9397,YPFKPPKVRN False False RPYEKGRLII 51.155222 415.907946765423 2562546.75 9379.0 nc|ENSG00000086061|P31689-2|DNAJA1;;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;;ENSG00000086061|ENST00000330899|DNAJA1 4.258124748865764 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9399 51.166 369.0 241160.0 25 0 20582.0 + 41654 VPPTPAEI 8 114 412.2321522631503 822.4497515931006 2 412.2328979372978 MULTI CID FTMS 0 0 0 9398 66799.796875 0.3524339798434717 -4 0.4110145568847656 1 Unmodified _VPPTPAEI_ ENSG00000167283|ENST00000300688|ATP5MG;ENSG00000249222|ENST00000505920|ATP5MGL;ENST00000527186.1_1_11:118277587-118279810:+|nuORF;ENST00000534385.1_1_11:118272380-118277824:+|nuORF 30.22481116460888 0.4082965392918993 4 [VP][TP]PAE{I|L} 8 0 + 33.083 0.0 0.0 4.0225 4.0225 75.907 0.0 0.0 0.0 2.6380501982880133 15.363430768704164 2.6380501982880133 8.239087409443187 0 0.75 1.2218487496163564 0.0 0.0 + + [VP][TP]PAE{I|L};[{I|L}P][PS]PAE{I|L} 4.0225;3.0208 +;- + 92 1 1.79 72134.2 1.0 4801 4596 9398 HBL1_DMSO_200M_050219_2,9399 HBL1_DMSO_200M_050219_2,9399,VPPTPAEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9400 51.167 22.0 3526400.0 25 0 555330.0 + 41778 VPVGKVLKV 9 81 469.82376476566105 937.632976598122 2 469.8237487673759 MULTI CID FTMS 0 0 0 9398 2766770.0 0.4192654470942883 -2 0.1774635314941406 2 Unmodified _VPVGKVLKV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 68.08070601005525 0.0218408846571049 4 VPVGKV{I|L}KV 9 0 + 77.89 0.0 0.0 8.3071 8.3071 94.659 0.0 0.0 0.0 51.539169630878405 11.271211393095228 11.271211393095228 12.807070678556812 0 1.7302046884880935 2.0 0.0 0.2742275032520141 + + VPVGKV{I|L}KV;[VP]VGK{I|L}KVV;VVPGKV{I|L}KV;[VP][KG]V{I|L}KVV;[KG]V{I|L}KVPVV;[KG]V{I|L}VPKVV;[KG]VVP{I|L}KVV;[KG]V{I|L}VKPVV;[KG]VV{I|L}PKVV;[KG]VPV{I|L}KVV 8.3071;6.9412;5.9088;5.4733;3.8187;3.6854;3.5023;3.4976;3.3644;3.1813 +;-;-;-;-;-;-;-;-;- + 623 + 1 1.79 64206.7 1.0 4802 4596 9398 HBL1_DMSO_200M_050219_2,9400 HBL1_DMSO_200M_050219_2,9400,VPVGKVLKV True True VPVGKVLKV 51.166797 469.823748767376 115170864.0 9398.0 nc|ENSG00000104517|O95071-2|UBR5;;ENSG00000104517|ENST00000520539|UBR5 6.047500928243001 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9401 51.168 49.0 1135500.0 25 0 150130.0 + 3805 DAIKEIAKV 9 98 493.79785821086347 985.581163488527 2 493.7978698611259 MULTI CID FTMS 0 0 0 9398 805182.8125 0.9055013233272852 -1 0.0940971374511718 3 Unmodified _DAIKEIAKV_ ENSG00000117000|ENST00000372771|RLF 53.40400417844725 0.0329064971918313 4 VCPKE{I|L}AK 8 4 46.624 0.0 0.0 4.7306 0.0 0.0 0.0 114.05627618961172 114.05627618961172 21.75373472475883 0.0 0.0 0.0 0 1.9291746928241125 0.0 0.0 0.2742275032520141 VCPKE{I|L}AK 4.7306 - 702 + 1 1.79 51763.1 1.0 4803 4596 9398 HBL1_DMSO_200M_050219_2,9401 HBL1_DMSO_200M_050219_2,9401,DAIKEIAKV True True DAIKEIAKV 51.168111 493.797869861126 6004040.5 9398.0 ENSG00000117000|ENST00000372771|RLF 4.82461945215861 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9402 51.17 70.0 1027400.0 25 0 184000.0 -1 EGYMSERDG 9 97 530.2048168505634 1058.3950807679266 2 530.2051269412041 MULTI CID FTMS 0 0 0 9398 794095.0 1.0 0 0.0 4 Oxidation (M) _EGYM(Oxidation (M))SERDG_ ENSG00000170613|ENST00000302938|GARIN3 13.90604991867851 0.4602628045680013 4 {[DA]|[EG]}Y 3 -1 34.582 0.0 0.0 3.2674 0.0 0.0 0.0 706.2439076446756 706.2439076446756 13.1687674038008 0.0 0.0 0.0 0 0.7134679910804405 1.6989700043360187 0.0 0.0 {[DA]|[EG]}Y 3.2674 + + 98 + 1 1.79 62817.9 1.0 4804 4596 9398 HBL1_DMSO_200M_050219_2,9402 HBL1_DMSO_200M_050219_2,9402,EGYMSERDG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9403 51.171 73.0 1512500.0 25 0 236260.0 + 41780 VPVGKVLKV 9 109 313.55164635044093 937.6331096515228 3 313.5512267947197 MULTI CID FTMS 0 0 0 9398 592884.9375 0.367220474068034 -2 0.1774635314941406 5 Unmodified _VPVGKVLKV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 30.63653989081413 0.1413794767160703 4 VPV[KG]V{I|L}KV 9 0 + 52.555 0.0 0.0 5.6051 5.6051 78.26 0.0 0.0 0.0 35.55617102846572 2.830338162186017 2.830338162186017 4.304009240123889 0 0.6861818737241735 2.0 0.0 0.0 + + VPV[KG]V{I|L}KV;VPVV[KG]{I|L}KV;VVP[KG]V{I|L}KV;VVPV[KG]{I|L}KV 5.6051;5.1461;3.3871;2.928 +;-;-;- + 397 + 1 1.79 90104.3 1.0 4805 4596 9398 HBL1_DMSO_200M_050219_2,9403 HBL1_DMSO_200M_050219_2,9403,VPVGKVLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9404 51.174 102.0 1066900.0 25 0 86821.0 + 8226 EPYKVYRI 8 110 356.53450724554625 1066.5816923368388 3 356.5341979861259 MULTI CID FTMS 0 0 0 9398 471604.84375 1.0 0 0.0 6 Unmodified _EPYKVYRI_ ENSG00000140968|ENST00000268638|IRF8 22.736283301280096 0.5659792798204337 4 EPYKVY[R{I|L}] 8 0 + 51.77 0.0 0.0 4.8538 4.8538 71.634 0.0 0.0 0.0 16.40978057358332 2.396518287104435 2.396518287104435 2.396518287104435 0 0.0 0.0 0.0 0.6643943297944485 + + EPYKVY[R{I|L}];EPYKV{I|L}[YR];EPYK{I|L}V[YR] 4.8538;4.6291;4.3469 +;-;- + 100 + 1 1.79 96066.0 1.0 4806 4596 9398 HBL1_DMSO_200M_050219_2,9404 HBL1_DMSO_200M_050219_2,9404,EPYKVYRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9405 51.176 111.0 452410.0 25 0 38090.0 + 34457 SLYLYSKNV 9 95 543.7932290743609 1085.5719052155216 2 543.7938110232353 MULTI CID FTMS 0 0 0 9398 454032.40625 0.6665301252132074 -1 0.0940971374511718 7 Unmodified _SLYLYSKNV_ REV__ENST00000522364.5_1_8:80963727-80992703:-|nuORF;REV__nc|ENSG00000076554|P55327-5|TPD52;REV__nc|ENSG00000076554|P55327-6|TPD52;REV__nc|ENSG00000076554|P55327-7|TPD52;REV__nc|ENSG00000076554|P55327-8|TPD52;REV__nc|ENSG00000076554|P55327|TPD52 19.256988751693697 0.3154191944385105 4 {[TV]|[{I|L}S]}[KC]QVAST 9 -1 57.664 0.0 0.0 5.3118 0.0 0.0 0.0 165.06748377017814 165.06748377017814 38.90814710730577 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.7764209843288905 0.0 {[TV]|[{I|L}S]}[KC]QVAST 5.3118 - 617 + 1 1.79 46864.7 1.0 4807 4596 9398 HBL1_DMSO_200M_050219_2,9405 HBL1_DMSO_200M_050219_2,9405,SLYLYSKNV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9406 51.179 145.0 583700.0 25 0 99682.0 + 43692 YAYDGKDYLA 10 93 589.7718690657549 1177.5291851983095 2 589.7712280154228 MULTI CID FTMS 0 0 0 9398 376416.875 0.1865766960218107 -2 0.1774635314941406 8 Unmodified _YAYDGKDYLA_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 49.52724829834842 0.0829255630816734 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY[{I|L}A] 10 5 + 70.309 0.0 0.0 5.9709 5.9709 76.216 0.0 0.0 0.0 2.309224750678922 7.269987279362624 2.309224750678922 2.309224750678922 0 0.7302046884880937 2.0 1.3098943791441968 0.3252574989159953 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY[{I|L}A];{[YD]|[{M(Oxidation (M))|F}M]}GKDYAY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAYY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YD[QT]AY[{I|L}A];{[YD]|[{M(Oxidation (M))|F}M]}GKDAYY[{I|L}A];{[YD]|[{M(Oxidation (M))|F}M]}GKDYA{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DY{I|L}A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KG]DYDYAY[{I|L}A];{[YD]|[{M(Oxidation (M))|F}M]}GKDY{I|L}A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 5.9709;5.7748;5.1628;5.1179;5.0506;4.9667;4.9218;4.8005;4.7647;4.6044 -;-;-;-;-;-;-;-;-;- 2556 1 1.79 69434.1 1.0 4808 4596 9398 HBL1_DMSO_200M_050219_2,9406 HBL1_DMSO_200M_050219_2,9406,YAYDGKDYLA True True YAYDGKDYLA 51.178926 589.771228015423 32337766.0 9398.0 nc|ENSG00000204632|P17693-4|HLA-G;;nc|ENSG00000204632|P17693-5|HLA-G;;ENSG00000204632|ENST00000360323|HLA-G 5.054060141245524 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9407 51.184 270.0 535720.0 25 0 111680.0 -1 0 129 351.72939146667466 701.4442300001493 2 351.7289916872978 MULTI CID FTMS 0 0 0 9398 200583.109375 0.0612630862183328 -3 0.2237739562988281 9 4 TV{I|L}{I|L}TR 6 -1 + 68.234 0.0 0.0 9.7276 9.7276 91.107 0.0 0.0 0.0 36.19788758288394 7.050569209181759 7.050569209181759 7.050569209181759 0 0.516375387189108 2.0 0.6237125054200234 0.0 TV{I|L}{I|L}TR;TV{I|L}RT{I|L};T{I|L}V{I|L}TR;T{I|L}VRT{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}V[VP] 9.7276;8.7224;6.1963;5.1912;1.9146 -;-;-;-;- 102 + 1 1.79 118115.5 1.0 4809 4596 9398 HBL1_DMSO_200M_050219_2,9407 HBL1_DMSO_200M_050219_2,9407, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9408 51.189 267.0 439900.0 25 0 56009.0 + 41191 VPDYMSNGV 9 112 491.222424695432 980.430296457664 2 491.2213622927666 MULTI CID FTMS 0 0 0 9398 196878.265625 0.6571981458139937 2 -0.1654129028320312 10 Unmodified _VPDYMSNGV_ REV__ENSG00000136960|ENST00000075322|ENPP2;REV__nc|ENSG00000136960|Q13822-2|ENPP2;REV__nc|ENSG00000136960|Q13822-3|ENPP2 16.942295170755138 0.3780752226737986 4 V 1 -1 12.474 0.0 0.0 1.2723 0.0 0.0 863.3510632196743 0.0 863.3510632196743 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2723 + + 63 + 1 1.79 91359.9 1.0 4810 4596 9398 HBL1_DMSO_200M_050219_2,9408 HBL1_DMSO_200M_050219_2,9408,VPDYMSNGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9409 51.194 274.0 622670.0 25 0 89989.0 + 24410 MFQNRVRPL 9 124 387.5495161221887 1159.626718966766 3 387.5504638552666 MULTI CID FTMS 0 0 0 9398 195512.34375 0.0156236427567571 -4 0.4110145568847656 11 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 50.855029805455786 0.0384952370514206 4 M{M(Oxidation (M))|F}Q[RN]VR[{I|L}P] 9 0 + 38.61 0.0 0.0 3.3295 3.3295 68.609 0.0 0.0 0.0 24.625299705980204 4.555227896979595 4.555227896979595 3.467874862246568 0 0.25 0.0 0.0 1.1549471895720984 + + M{M(Oxidation (M))|F}Q[RN]VR[{I|L}P];M{M(Oxidation (M))|F}Q[RN]VVG[{I|L}P];M{M(Oxidation (M))|F}[AG][RN]VR[{I|L}P];M{M(Oxidation (M))|F}Q[RN]VVAPV;M{M(Oxidation (M))|F}[AG][RN]VVG[{I|L}P];M{M(Oxidation (M))|F}Q[RN][R{I|L}]PV;M{M(Oxidation (M))|F}QKK[WP]PV;M{M(Oxidation (M))|F}[AG][RN]VVAPV;M[YV][WP]VR[{I|L}P];[QT]Y{[{M(Oxidation (M))|F}H]|[RQ]}VR[{I|L}P] 3.3295;3.0305;2.5354;2.4644;2.2401;2.229;1.8175;1.6741;0.65052;0.089554 +;-;-;-;-;-;-;-;-;- + 693 + 1 1.79 138967.3 1.0 4811 4596 9398 HBL1_DMSO_200M_050219_2,9409 HBL1_DMSO_200M_050219_2,9409,MFQNRVRPL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9410 51.202 456.0 261310.0 25 0 24172.0 22173 LPPWALAAL 9 126 476.2849823784856 950.5554118237712 2 476.2846557497978 MULTI CID FTMS 0 0 0 9398 165584.375 0.3746379967645961 -4 0.4110145568847656 12 Unmodified _LPPWALAAL_ ENST00000405510.5_2_22:39131173-39131284:-|nuORF 20.871210003555333 0.2717241269066626 4 {I|L}PPE 4 6 50.79 0.0 0.0 5.3432 0.0 0.0 0.0 511.29987512759993 511.29987512759993 39.95226360429423 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPE 5.3432 - 163 + 1 1.79 95237.3 1.0 4812 4596 9398 HBL1_DMSO_200M_050219_2,9410 HBL1_DMSO_200M_050219_2,9410,LPPWALAAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9411 51.21 451.0 294890.0 25 0 21777.0 -1 ENYQMKYYFY 10 131 732.810553881727 1463.6065548302538 2 732.8114501833916 MULTI CID FTMS 0 0 0 9398 154132.5625 0.534046269612136 -2 0.1774635314941406 13 Oxidation (M) _ENYQM(Oxidation (M))KYYFY_ ENSG00000102030|ENST00000464845|NAA10;ENST00000466877.5_1_X:153197755-153200402:-|nuORF;ENST00000478177.1_1_X:153199394-153200402:-|nuORF;ENST00000488481.1_1_X:153199817-153200402:-|nuORF;ENST00000494813.5_1_X:153187159-153200402:-|nuORF;nc|ENSG00000102030|P41227-2|NAA10 9.38312468134398 0.6832340498775793 4 [AG]NHDEAQAGNA{M(Oxidation (M))|F}Y 14 -1 + 90.439 0.0 0.0 6.1792 6.1792 81.173 0.0 0.0 0.0 4.771212547196626 10.7521226932964 4.771212547196626 4.771212547196626 0 0.8182503180159344 1.6989700043360187 0.2887254899964357 1.9718487496163564 [AG]NHDEAQAGNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GHDEAQAGNA{M(Oxidation (M))|F}Y;[AG]GGHDEAQAGNA{M(Oxidation (M))|F}Y;[AG]NHDEAQQNA{M(Oxidation (M))|F}Y;[AG]NHNSNQAGNA{M(Oxidation (M))|F}Y;[AG]NHDEAQAGAN{M(Oxidation (M))|F}Y;[AG]NHDEAQAGGGA{M(Oxidation (M))|F}Y;[AG]NHDEA[AG]AGNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}HDEAQAGNA{M(Oxidation (M))|F}Y;[AG]GGHNSNQAGNA{M(Oxidation (M))|F}Y 6.1792;5.8532;5.7599;5.7236;5.6733;5.631;5.5608;5.5608;5.4935;5.4628 -;-;-;-;-;-;-;-;-;- 26666 1 1.79 96299.5 1.0 4813 4596 9398 HBL1_DMSO_200M_050219_2,9411 HBL1_DMSO_200M_050219_2,9411,ENYQMKYYFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9412 51.215 284.0 367050.0 25 0 22285.0 + 31489 RPYEKGRLII 10 116 415.5880178933952 1243.7422242803857 3 415.5873901247978 MULTI CID FTMS 0 0 0 9398 139551.890625 1.0 0 0.0 14 Unmodified _RPYEKGRLII_ ENSG00000086061|ENST00000330899|DNAJA1;ENST00000465677.1_1_9:33034269-33037131:+|nuORF;nc|ENSG00000086061|P31689-2|DNAJA1 17.86316937532769 0.5478153791579383 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RE 4 7 18.728 0.0 0.0 1.5058 0.0 0.0 0.0 695.458857252613 695.458857252613 0.5014445271442725 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RE 1.5058 - 277 1 1.79 91184.3 1.0 4814 4596 9398 HBL1_DMSO_200M_050219_2,9412 HBL1_DMSO_200M_050219_2,9412,RPYEKGRLII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9414 51.22 16.0 3898400.0 25 0 321970.0 + 2155 APYPTPAQV 9 91 472.2480499366312 942.4815469400623 2 472.2480041384697 MULTI CID FTMS 0 0 0 9413 3522091.0 0.7686570193464358 3 -0.3284378051757812 1 Unmodified _APYPTPAQV_ ENSG00000198807|ENST00000361487|PAX9 67.34385681178166 0.0221257235307089 4 [PA][TP]YPAQV 9 2 + 55.441 0.0 0.0 5.8824 5.8824 71.482 0.0 0.0 0.0 0.0076301616615381 9.577570906191896 0.0076301616615381 0.0076301616615381 0 1.1593793813122064 1.2218487496163564 0.8494850021680094 0.0 [PA][TP]YPAQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PTAPAQV;[PA]Y[TP]PAQV;[AG][QT]TAPAQV;[TP][PA]YPAQV;[TP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APAQV;{NN|[MP]|[D{I|L}]|[EV]}{[ET]|[MV]}APAQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[TP]PAQV;[KG][DG]TAPAQV;[PA]Q[SG][VS]AQV 5.8824;5.8816;5.2436;4.9046;4.7064;4.571;4.4506;4.3469;3.9743;3.1724 -;-;+;-;-;-;-;-;-;- + 652 1 1.79 54992.7 1.0 4815 4597 9413 HBL1_DMSO_200M_050219_2,9414 HBL1_DMSO_200M_050219_2,9414,APYPTPAQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9415 51.221 24.0 1923400.0 25 0 170440.0 + 21259 LPDTMSLTV 9 71 488.7531476276548 975.4917423221096 2 488.7532226443291 MULTI CID FTMS 0 0 0 9413 2546032.5 0.6685943875290093 6 -0.6812515258789062 2 Unmodified _LPDTMSLTV_ REV__ENSG00000134376|ENST00000367400|CRB1;REV__nc|ENSG00000134376|P82279-2|CRB1;REV__nc|ENSG00000134376|P82279-3|CRB1;REV__nc|ENSG00000134376|P82279-4|CRB1 30.22481116460888 0.1466181017706357 4 PAP{I|L}{[WT]|[RM]} 6 -1 21.515 0.0 0.0 2.2056 0.0 0.0 292.1066761701188 0.0 292.1066761701188 0.0 1.566818653688529 0.0 0.0 0 0.0 0.0 0.0 0.0 PAP{I|L}{[WT]|[RM]} 2.2056 - 367 1 1.79 42012.3 1.0 4816 4597 9413 HBL1_DMSO_200M_050219_2,9415 HBL1_DMSO_200M_050219_2,9415,LPDTMSLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9416 51.222 32.0 1777500.0 25 0 274340.0 + 22031 LPPPPPPAM 9 69 458.751710776598 915.488868619996 2 458.7517272830009 MULTI CID FTMS 0 0 0 9413 1624112.25 0.3672071934173164 17 -1.5645751953125 3 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 79.93452657146344 0.0175326119056068 4 [{I|L}P]PPPP 6 3 54.742 0.0 0.0 5.9796 0.0 0.0 0.0 314.1179260495367 314.1179260495367 18.41129063296272 0.0 0.0 0.0 0 1.5356668758921828 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.9796 + + 273 1 1.79 50855.6 1.0 4817 4597 9413 HBL1_DMSO_200M_050219_2,9416 HBL1_DMSO_200M_050219_2,9416,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9417 51.224 87.0 707260.0 25 0 92606.0 5128 DIGVLYEGKER 11 69 639.8376766228437 1277.6608003124873 2 639.8378784060478 MULTI CID FTMS 0 0 0 9413 706317.8125 0.1413102796784617 4 -0.4260597229003906 4 Unmodified _DIGVLYEGKER_ ENSG00000137145|ENST00000434457|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C 9.38312468134398 0.8308777417566128 4 [TP]SVVAVT 8 10 46.107 0.0 0.0 3.6087 0.0 0.0 0.0 520.215889994381 520.215889994381 24.16895006820745 0.0 0.0 0.0 0 0.0 0.0 2.274227503252014 0.0 [TP]SVVAVT 3.6087 - 307 1 1.79 49394.1 1.0 4818 4597 9413 HBL1_DMSO_200M_050219_2,9417 HBL1_DMSO_200M_050219_2,9417,DIGVLYEGKER False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9418 51.226 69.0 711210.0 25 0 44969.0 + + 15189 KYQAVTATL 9 100 497.7826336165617 993.5507142999236 2 497.7827636599541 MULTI CID FTMS 0 0 0 9413 658098.5 0.2305797397869646 3 -0.3284378051757812 5 Unmodified _IPEHLTATL_ ENST00000425147.1_1_21:26734448-26734742:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3;ENST00000478813.1_1_8:81177882-81177960:-|nuORF;ENSG00000142541|ENST00000391857|RPL13A 36.04419817259434 0.0971720506436186 4 ATVKAC(Carbamidomethyl (C)){I|L} 7 -1 43.945 0.0 0.0 4.423 0.0 0.0 232.1459705441817 0.0 232.1459705441817 0.0 23.565694802651148 0.0 0.0 0 0.5 0.0 0.5 0.0 ATVKAC(Carbamidomethyl (C)){I|L} 4.423 - 481 + 1 1.79 44735.4 1.0 4819 4597 9413 HBL1_DMSO_200M_050219_2,9418 HBL1_DMSO_200M_050219_2,9418,IPEHLTATL False False KYQAVTATL 51.225832 497.782763659954 43609896.0 9413.0 ENST00000425147.1_1_21:26734448-26734742:+|nuORF;;nc|ENSG00000293056|Q6NVV1|RPL13AP3;;ENST00000478813.1_1_8:81177882-81177960:-|nuORF;;ENSG00000142541|ENST00000391857|RPL13A 6.784407297770183 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9419 51.228 89.0 533040.0 25 0 109750.0 + 14791 ILDQKINEV 9 75 536.3064495897556 1070.5983462463112 2 536.3082763552666 MULTI CID FTMS 0 0 0 9413 579730.6875 0.1968252406096846 3 -0.3284378051757812 6 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 36.12702656103203 0.0967173616627612 4 {I|L}{I|L}[C(Carbamidomethyl (C))S]{I|L}{I|L}K 7 6 44.965 0.0 0.0 4.2 0.0 0.0 0.0 240.06321130924064 240.06321130924064 30.98599459218456 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.7742275032520141 {I|L}{I|L}[C(Carbamidomethyl (C))S]{I|L}{I|L}K 4.2 - 281 + 1 1.79 41917.3 1.0 4820 4597 9413 HBL1_DMSO_200M_050219_2,9419 HBL1_DMSO_200M_050219_2,9419,ILDQKINEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9420 51.242 800.0 184470.0 25 0 20639.0 + 5963 DQLCISFHHFP 11 113 672.3141554862992 1342.6137580393984 2 672.3142578005791 MULTI CID FTMS 0 0 0 9413 248264.34375 0.4351946397460503 10 -1.048553466796875 7 Unmodified _DQLCISFHHFP_ REV__ENST00000556103.1_1_14:23946657-23947232:+|nuORF 15.248480904072842 0.7179608125786238 4 [PS]TAS{M(Oxidation (M))|F}SQ{I|L} 9 -1 35.508 0.0 0.0 2.6447 0.0 0.0 0.0 421.1502319986359 421.1502319986359 3.5262798612418464 0.0 0.0 0.0 0 0.0 0.0 2.518930178484529 0.2887254899964357 [PS]TAS{M(Oxidation (M))|F}SQ{I|L} 2.6447 - 1077 1 1.79 110427.5 0.8999999761581421 4821 4597 9413 HBL1_DMSO_200M_050219_2,9420 HBL1_DMSO_200M_050219_2,9420,DQLCISFHHFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9421 51.245 165.0 376400.0 25 0 28820.0 + 11897 GLVYGIAPGL 10 108 480.2810263203416 958.5474997074832 2 480.2801086306572 MULTI CID FTMS 0 0 0 9413 172715.265625 0.2434973185236513 3 -0.3284378051757812 8 Unmodified _GLVYGIAPGL_ REV__ENSG00000173930|ENST00000310954|SLCO4C1 24.67388899826682 0.4143206957119831 4 {[VA]|[{I|L}G]}VY 4 -1 32.945 0.0 0.0 3.437 0.0 0.0 0.0 523.2921236627561 523.2921236627561 18.433306376854112 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[VA]|[{I|L}G]}VY 3.437 + + 301 + 1 1.79 51023.7 1.0 4822 4597 9413 HBL1_DMSO_200M_050219_2,9421 HBL1_DMSO_200M_050219_2,9421,GLVYGIAPGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9422 51.259 800.0 248880.0 25 0 17176.0 + 6585 EANPAVPEV 9 173 463.2347330252519 924.4549131173038 2 463.2352477908134 MULTI CID FTMS 0 0 0 9413 141382.03125 0.1680570304596019 5 -0.5622978210449219 9 Unmodified _EANPAVPEV_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 49.93300154707207 0.0405168250806675 4 WPEV 4 6 29.729 0.0 0.0 3.2158 0.0 0.0 395.200139076771 0.0 395.200139076771 0.0 7.052593986562819 0.0 0.0 0 0.5 0.0 1.0114393726401687 0.0 WPEV 3.2158 - 486 + 1 1.79 153208.2 0.6000000238418579 4823 4597 9413 HBL1_DMSO_200M_050219_2,9422 HBL1_DMSO_200M_050219_2,9422,EANPAVPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9423 51.264 284.0 308190.0 25 0 22873.0 + 44496 YPASIVHQV 9 135 507.2741310456541 1012.5337091581084 2 507.2734863162041 MULTI CID FTMS 0 0 0 9413 126720.1875 0.105243927481294 -6 0.6271286010742188 10 Unmodified _YPASIVHQV_ ENSG00000064393|ENST00000406875|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2 34.40172386719151 0.1061884637610825 4 YPA{[TV]|[{I|L}S]}VHN{I|L} 9 2 + 61.098 0.0 0.0 6.0342 6.0342 81.036 0.0 0.0 0.0 37.70766971142507 5.122592760811898 5.122592760811898 5.166297960033361 0 0.3252574989159953 1.5228787452803376 0.4247425010840047 0.4247425010840047 YPA{[TV]|[{I|L}S]}VHN{I|L};YPA{[TV]|[{I|L}S]}VHQV;YPA{[TV]|[{I|L}S]}VHGG{I|L};YPA{[TV]|[{I|L}S]}VH[AG]V;YPA[HK][PS]T{I|L};YPA[HK][TP]S{I|L};YVSVRYN{I|L};[VS]YVRYN{I|L};YPA[HK][TP]TV;YVSVRYQV 6.0342;5.524;4.7053;4.1951;3.7123;3.4656;3.387;3.1905;2.9553;2.8767 -;+;-;-;-;-;-;-;-;- + 1023 + 1 1.79 73086.3 1.0 4824 4597 9413 HBL1_DMSO_200M_050219_2,9423 HBL1_DMSO_200M_050219_2,9423,YPASIVHQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9424 51.278 800.0 464670.0 25 0 140430.0 + 24414 MFQNRVRPL 9 141 580.8205153631565 1159.6264777931128 2 580.8217040896416 MULTI CID FTMS 0 0 0 9413 131567.59375 0.0463366843254326 -3 0.2374534606933593 11 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 64.23631603340823 0.0237365939569086 4 {M(Oxidation (M))|F}{I|L}[HM]VRP{I|L} 8 4 38.101 0.0 0.0 3.2857 0.0 0.0 148.0647521188825 0.0 148.0647521188825 0.0 9.474119043930216 0.0 0.0 0 1.6989700043360187 0.0 0.0 0.8494850021680094 {M(Oxidation (M))|F}{I|L}[HM]VRP{I|L} 3.2857 - 464 + 1 1.79 281797.2 0.6700000166893005 4825 4597 9413 HBL1_DMSO_200M_050219_2,9424 HBL1_DMSO_200M_050219_2,9424,MFQNRVRPL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9425 51.292 800.0 62785.0 25 0 2377.3 -1 RVVDELDNQM 10 101 617.7919770679296 0 617.7899047732353 PEAK CID FTMS 0 0 0 -1 0 12 Oxidation (M) _RVVDELDNQM(Oxidation (M))_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 37.07464296494664 0.1417649821171396 4 QND{I|L}ED 6 -1 46.019 0.0 0.0 3.7305 0.0 0.0 165.0545186379587 351.21494470767817 516.2694633456368 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.4247425010840047 QND{I|L}ED 3.7305 - 88 + 1 1.79 46751.6 0.6299999952316284 4826 4597 9413 HBL1_DMSO_200M_050219_2,9425 HBL1_DMSO_200M_050219_2,9425,RVVDELDNQM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9426 51.307 800.0 257840.0 25 0 9467.5 + 24781 MPHSPTLRV 9 235 346.5238265325865 1036.5496501979596 3 346.5233032107353 MULTI CID FTMS 0 0 0 9413 107907.1875 0.7075375867112769 4 -0.4260597229003906 13 Unmodified _MPHSPTLRV_ ENSG00000183337|ENST00000378444|BCOR;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR 15.738622578938676 0.4106572216562794 4 [{I|L}T]M{[QV]|[N{I|L}]|[RA]|[KV]}V{[ES]|[DT]|[{I|L}C]}M 9 8 + 44.813 0.0 0.0 4.3233 4.3233 83.74 0.0 0.0 0.0 17.29019876572443 13.826282190322516 13.826282190322516 38.85393121313263 0 0.0 1.6989700043360187 1.0709991640913 0.0 [{I|L}T]M{[QV]|[N{I|L}]|[RA]|[KV]}V{[ES]|[DT]|[{I|L}C]}M;[{M(Oxidation (M))|F}V]H[PA][RP]T{I|L} 4.3233;0.57487 -;- 238 1 1.79 168082.4 0.959999978542328 4827 4597 9413 HBL1_DMSO_200M_050219_2,9426 HBL1_DMSO_200M_050219_2,9426,MPHSPTLRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9427 51.321 800.0 152430.0 25 0 12890.0 38681 TTLKEKLHKS 10 149 592.8554718693807 1183.6963908055614 2 592.8553954958916 MULTI CID FTMS 0 0 0 9413 90202.0625 1.0 0 0.0 14 Unmodified _TTLKEKLHKS_ ENSG00000197980|ENST00000356539|LEKR1 7.0370850670814 0.6940858557465671 4 {[DS]|[MA]|[CV]|TT}{I|L}K 4 6 27.652 0.0 0.0 2.336 0.0 0.0 0.0 737.3998768292834 737.3998768292834 9.982653242032452 0.0 0.0 0.0 0 0.3494850021680094 0.7958800173440752 0.0 0.0 + {[DS]|[MA]|[CV]|TT}{I|L}K 2.336 + + 305 + 1 1.79 91000.8 0.5099999904632568 4828 4597 9413 HBL1_DMSO_200M_050219_2,9427 HBL1_DMSO_200M_050219_2,9427,TTLKEKLHKS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9429 51.325 8.2 7243600.0 25 0 1508200.0 + 37057 TGFSPRQI 8 62 453.2455627525363 904.4765725718726 2 453.2457458376884 MULTI CID FTMS 0 0 0 9428 8558855.0 0.2201264631109223 -3 0.2595100402832031 1 Unmodified _TGFSPRQI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 43.85829265575387 0.1697421968005898 4 TG{M(Oxidation (M))|F}SP 5 3 60.93 0.0 0.0 6.7365 0.0 0.0 0.0 412.2329195611938 412.2329195611938 47.43501263708417 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 + TG{M(Oxidation (M))|F}SP 6.7365 + + 84 + 1 1.792 52926.1 1.0 4829 4598 9428 HBL1_DMSO_200M_050219_2,9429 HBL1_DMSO_200M_050219_2,9429,TGFSPRQI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9430 51.327 53.0 1205200.0 25 0 224000.0 + + 24051 YLHSQVVSV 9 74 515.8112729690971 1029.607993004994 2 515.8116943240166 MULTI CID FTMS 0 0 0 9428 707692.375 0.5956829774200724 1 -0.108123779296875 2 Unmodified _LWNRKKSV_ nc|ENSG00000204267|Q03519-2|TAP2;ENSG00000204267|ENST00000374897|TAP2 13.90604991867851 0.7054780292895731 4 SV 2 -1 18.443 0.0 0.0 1.7913 0.0 0.0 825.4964950575317 0.0 825.4964950575317 0.0 1.6207689725555952 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 SV 1.7913 + + 36 + 1 1.792 54574.0 1.0 4830 4598 9428 HBL1_DMSO_200M_050219_2,9430 HBL1_DMSO_200M_050219_2,9430,LWNRKKSV False False YLHSQVVSV 51.326696 515.811694324017 2187006.5 9428.0 nc|ENSG00000204267|Q03519-2|TAP2;;ENSG00000204267|ENST00000374897|TAP2 3.804876168568929 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9431 51.328 57.0 1272500.0 25 0 190610.0 + 4490 DAYELKHAL 9 99 530.2775837918252 1058.5406146504504 2 530.2776977419853 MULTI CID FTMS 0 0 0 9428 816179.0 0.2116546884975864 -2 0.1654129028320312 3 Unmodified _DAYELKHAL_ ENSG00000164111|ENST00000296511|ANXA5;ENST00000513428.5_1_4:122602814-122617744:-|nuORF 49.93300154707207 0.0405168250806675 4 {[DA]|[EG]}YE{I|L}KHA{I|L} 9 0 + 71.71 0.0 0.0 6.7744 6.7744 94.244 0.0 0.0 0.0 42.90196774751513 11.61159286695316 11.61159286695316 71.70970510141954 0 1.1382104921644451 1.6989700043360187 0.3494850021680094 0.0 + + {[DA]|[EG]}YE{I|L}KHA{I|L} 6.7744 + + 244 + 1 1.792 62507.0 1.0 4831 4598 9428 HBL1_DMSO_200M_050219_2,9431 HBL1_DMSO_200M_050219_2,9431,DAYELKHAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9432 51.33 104.0 433090.0 25 0 35954.0 + 2487 AQYEHDLEV 9 72 552.2538586682393 1102.4931644032786 2 552.2535888552666 MULTI CID FTMS 0 0 0 9428 443582.9375 0.0355851089603237 -3 0.2595100402832031 4 Unmodified _AQYEHDLEV_ ENSG00000132341|ENST00000543796|RAN;ENST00000413691.2_1_4:174554896-174555010:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 39.94969957227396 0.0757326808254658 4 [HD]E{I|L}Y[QA]EV 9 7 + 43.918 0.0 0.0 3.9835 3.9835 48.582 0.0 0.0 0.0 3.0102999566398125 8.111658399188286 3.0102999566398125 0.0 0 0.805462187404089 0.0 0.0 0.0 [HD]E{I|L}Y[QA]EV;[HD]EY{I|L}[QA]EV;[HD]EY[QA]{I|L}EV;{[YC]|[HE]}D{I|L}Y[QA]EV;{[YC]|[HE]}DY{I|L}[QA]EV;[HD]EY{I|L}E[QA]V;[HD]E{I|L}YE[QA]V;{[YC]|[HE]}YD{I|L}[QA]EV;{[YC]|[HE]}DY[QA]{I|L}EV;{[YC]|[HE]}D{I|L}YE[QA]V 3.9835;3.9835;3.7105;3.7105;3.7105;3.7065;3.7065;3.4375;3.4375;3.4334 -;-;-;-;-;-;-;-;-;- 296 1 1.792 44550.3 1.0 4832 4598 9428 HBL1_DMSO_200M_050219_2,9432 HBL1_DMSO_200M_050219_2,9432,AQYEHDLEV True True AQYEHDLEV 51.330377 552.253588855267 173391712.0 9428.0 ENST00000413691.2_1_4:174554896-174555010:-|nuORF;;ENST00000455094.1_1_6:30454046-30454364:+|nuORF;;ENSG00000132341|ENST00000543796|RAN 7.595626672108968 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9433 51.333 155.0 440110.0 25 0 40367.0 + 2168 AQAEVYKEL 9 96 525.7770040325356 1049.5394551318711 2 525.7770873904228 MULTI CID FTMS 0 0 0 9428 403027.46875 0.0864924371489099 -2 0.1654129028320312 5 Unmodified _AQAEVYKEL_ ENSG00000169710|ENST00000306749|FASN 33.4449034751529 0.1114409586740657 4 [QA]AEVY 6 3 48.699 0.0 0.0 4.64 0.0 0.0 0.0 385.2098177545532 385.2098177545532 17.05533196897374 0.0 0.0 0.0 0 1.1421590589602533 0.8860566476931632 0.0 0.0 + [QA]AEVY 4.64 + + 423 + 1 1.792 56937.4 1.0 4833 4598 9428 HBL1_DMSO_200M_050219_2,9433 HBL1_DMSO_200M_050219_2,9433,AQAEVYKEL True True AQAEVYKEL 51.333463 525.777087390423 98854674.0 9428.0 ENSG00000169710|ENST00000306749|FASN 6.401547749837239 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9434 51.339 331.0 434270.0 25 0 68177.0 21534 LPITVRHL 8 145 316.871433636991 947.592471511173 3 316.8709289431572 MULTI CID FTMS 0 0 0 9428 302327.21875 1.0 0 0.0 6 Unmodified _LPITVRHL_ ENST00000455557.2_1_3:194219211-194219373:-|nuORF 56.17704186161178 0.1143274477948619 4 {I|L}P{I|L}{I|L}SRH{I|L} 8 2 + 81.993 0.0 0.0 8.6528 8.6528 80.715 0.0 0.0 0.0 69.51874416914693 8.492149424926808 8.492149424926808 0.796896906561031 0 0.3807196863200844 2.0 1.0501648626366045 0.3252574989159953 {I|L}P{I|L}{I|L}SRH{I|L};{I|L}P{I|L}TVRH{I|L};{I|L}{I|L}P{I|L}SRH{I|L};{I|L}{I|L}PTVRH{I|L};{I|L}{I|L}{I|L}PSRH{I|L} 8.6528;8.5687;5.6486;5.5645;4.2682 -;+;-;-;- + 205 + 1 1.792 115758.1 1.0 4834 4598 9428 HBL1_DMSO_200M_050219_2,9434 HBL1_DMSO_200M_050219_2,9434,LPITVRHL True True IPITVRHI 51.339471 316.870928943157 2605203.75 9428.0 ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2;;ENST00000468414.1_1_3:127336783-127340613:+|nuORF 1.9375081459681196 3.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9435 51.345 293.0 226990.0 25 0 35446.0 -1 VVCMCDFESRQ 11 94 695.2828564121777 1388.5511598911553 2 695.2842285037041 MULTI CID FTMS 0 0 0 9428 280774.8125 0.900740077446375 -1 0.1054229736328125 7 Carbamidomethyl (C),Oxidation (M) _VVC(Carbamidomethyl (C))M(Oxidation (M))CDFESRQ_ ENSG00000137075|ENST00000259605|RNF38;nc|ENSG00000137075|Q9H0F5-2|RNF38;nc|ENSG00000137075|Q9H0F5-3|RNF38;nc|ENSG00000137075|Q9H0F5-4|RNF38;nc|ENSG00000137075|Q9H0F5-5|RNF38 16.149105407346934 0.6992268271266642 4 VV{I|L}[YN]D 6 -1 57.906 0.0 0.0 4.1703 0.0 0.0 0.0 682.1710909479124 682.1710909479124 40.04432191740108 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.75 0.9247425010840048 VV{I|L}[YN]D 4.1703 - 151 + 1 1.792 53134.9 1.0 4835 4598 9428 HBL1_DMSO_200M_050219_2,9435 HBL1_DMSO_200M_050219_2,9435,VVCMCDFESRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9436 51.352 370.0 211030.0 25 0 13657.0 + 32198 RVVDELDNQM 10 101 609.7928654394397 1217.5711779456792 2 609.7923461794853 MULTI CID FTMS 0 0 0 9428 257138.5625 0.0103874508720191 6 -0.6607017517089844 8 Unmodified _RVVDELDNQM_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 65.47368725323818 0.0222277162070287 4 [RV]VDE{I|L}DNQM 10 0 + 81.305 0.0 0.0 6.6776 6.6776 87.353 0.0 0.0 0.0 5.786772111811487 62.862526176977056 5.786772111811487 9.164539485499247 0 0.7302046884880938 0.0 0.805462187404089 1.024227503252014 + + [RV]VDE{I|L}DNQM;[RV]VDE{I|L}DGGQM;[RV]VDE{I|L}DN[AG]M;[RV]VDE{I|L}DGG[AG]M;{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]E[WR]QM;{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]TQQNQM;{NN|[MP]|[D{I|L}]|[EV]}WW{I|L}{I|L}NQM;[RV]VDT[HT]D[{M(Oxidation (M))|F}E] 6.6776;5.9249;5.9249;5.1752;2.7328;2.7177;2.4284;0.71142 +;-;-;-;-;-;-;- + 367 1 1.792 62706.0 1.0 4836 4598 9428 HBL1_DMSO_200M_050219_2,9436 HBL1_DMSO_200M_050219_2,9436,RVVDELDNQM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9437 51.359 442.0 249800.0 25 0 16364.0 + 30294 QYQDNIKEL 9 134 575.7902488815489 1149.5659448298975 2 575.7904540896416 MULTI CID FTMS 0 0 0 9428 194935.5625 0.4792351521479175 -2 0.1654129028320312 9 Unmodified _QYQDNIKEL_ ENSG00000090889|ENST00000374403|KIF4A;nc|ENSG00000090889|O95239-2|KIF4A 51.629811660486645 0.0367964933207742 4 {[WS]|[C(Carbamidomethyl (C)){I|L}]}ENN{I|L}KE 8 5 34.791 0.0 0.0 3.0264 0.0 0.0 0.0 146.08099917396933 146.08099917396933 -4.40536768267237 0.0 -4.40536768267237 0.0 0 0.0 1.3010299956639813 0.0 0.2887254899964357 {[WS]|[C(Carbamidomethyl (C)){I|L}]}ENN{I|L}KE 3.0264 - 1726 1 1.792 85238.3 1.0 4837 4598 9428 HBL1_DMSO_200M_050219_2,9437 HBL1_DMSO_200M_050219_2,9437,QYQDNIKEL True True QYQDNIKEL 51.35939 575.790454089642 5078437.5 9428.0 nc|ENSG00000090889|O95239-2|KIF4A;;ENSG00000090889|ENST00000374403|KIF4A 6.82524569829305 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9438 51.373 800.0 80121.0 25 0 20831.0 -1 0 34 1164.4589982115967 0 1164.456957995892 PEAK CID FTMS 0 0 0 9428 163414.625 1.0 0 0.0 10 4 S{[YC]|[HE]}QT 5 -1 17.263 0.0 0.0 0.74188 0.0 0.0 1189.39154180741 552.2793062799436 1741.6708480873535 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 S{[YC]|[HE]}QT 0.74188 - 17 + 1 1.792 61759.8 0.5299999713897705 4838 4598 9428 HBL1_DMSO_200M_050219_2,9438 HBL1_DMSO_200M_050219_2,9438, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9439 51.377 199.0 535440.0 25 0 33449.0 22302 LPSEEGKSL 9 133 480.2560706118581 958.497588290516 2 480.2557250857353 MULTI CID FTMS 0 0 0 9428 173841.03125 0.1074333076503908 -3 0.2595100402832031 11 Unmodified _LPSEEGKSL_ ENSG00000074370|ENST00000397041|ATP2A3;ENST00000574202.1_1_17:3856610-3867516:-|nuORF;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3 30.22481116460888 0.1466181017706357 4 [EP]VTN 5 7 23.153 0.0 0.0 2.4156 0.0 0.0 0.0 415.2203415466286 415.2203415466286 2.9796131030504647 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.5 0.0 [EP]VTN 2.4156 - 641 1 1.792 83306.6 1.0 4839 4598 9428 HBL1_DMSO_200M_050219_2,9439 HBL1_DMSO_200M_050219_2,9439,LPSEEGKSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9440 51.384 375.0 274680.0 25 0 15039.0 + -1 HPKRCNQCL 9 127 578.2815174456143 1154.5484819580286 2 578.2808105349541 MULTI CID FTMS 0 0 0 9428 145031.15625 0.1581926891138408 -10 0.8259391784667969 12 Carbamidomethyl (C) _HPKRCNQC(Carbamidomethyl (C))L_ REV__ENST00000601369.5_1_10:81451411-81451555:-|nuORF 13.50788311687929 0.4710407108020397 4 {[VA]|[{I|L}G]}[HK]WP 6 -1 28.632 0.0 0.0 2.4799 0.0 0.0 0.0 433.1479899102988 433.1479899102988 18.17410004652736 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.6747425010840047 {[VA]|[{I|L}G]}[HK]WP 2.4799 - 623 1 1.792 79277.3 1.0 4840 4598 9428 HBL1_DMSO_200M_050219_2,9440 HBL1_DMSO_200M_050219_2,9440,HPKRCNQCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9441 51.399 800.0 722870.0 25 0 168880.0 + 10857 GADKAKPPP 9 178 440.7480741842021 879.4815954352041 2 441.7139770388603 MULTI CID FTMS 0 0 0 9428 32490.052734375 0.3109985984326256 -2 0.1654129028320312 13 Unmodified _GADKAKPPP_ ENSG00000108344|ENST00000264639|PSMD3 34.10243960390752 0.1078313939113124 4 Q[HM]VRP{I|L} 7 8 + 33.549 0.0 0.0 3.8146 3.8146 68.32 0.0 0.0 0.0 2.5134875797167666 2.750225870288567 2.5134875797167666 2.750225870288567 0 0.0 0.0 0.0 0.2614393726401688 Q[HM]VRP{I|L};[AG]NRVR[HA];Q[HM]VR{I|L}P;[HC]RVRP{I|L};[HA]{[MG]|[TS]}VRP{I|L};[HC]RVR{I|L}P;[{I|L}P]{[WT]|[RM]}R[HA];[HA]{[MG]|[TS]}VR{I|L}P;{[QN]|[E{I|L}]|[KN]}RVR[HA];[HA]{[WT]|[RM]}RP{I|L} 3.8146;3.5019;3.3621;3.3482;3.122;2.8957;2.6739;2.6695;2.5544;2.3932 -;-;-;-;-;-;-;-;-;- 1144 + 1 1.792 448045.9 0.550000011920929 4841 4598 9428 HBL1_DMSO_200M_050219_2,9441 HBL1_DMSO_200M_050219_2,9441,GADKAKPPP True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9442 51.404 266.0 428950.0 25 0 33931.0 + 23593 LTPERFHNL 9 150 376.2054462818337 1125.594509445701 3 376.2066528201103 MULTI CID FTMS 0 0 0 9428 105496.2265625 0.4090976402304722 -1 0.1054229736328125 14 Unmodified _LTPERFHNL_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 27.22323531849824 0.1848086127304535 4 [{I|L}T]{I|L}P[DG]{[{M(Oxidation (M))|F}H]|[RQ]}N{I|L} 10 3 + 37.182 0.0 0.0 3.3033 3.3033 63.248 0.0 0.0 0.0 7.701047528165589 0.7058107428570679 0.7058107428570679 0.7058107428570679 0 0.3494850021680094 2.0 0.3054621874040891 1.2302046884880935 [{I|L}T]{I|L}P[DG]{[{M(Oxidation (M))|F}H]|[RQ]}N{I|L};[{I|L}T]{I|L}P[DG]{[{M(Oxidation (M))|F}H]|[RQ]}QV;[{I|L}T]{I|L}P[DG]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}N;[{I|L}T]PER{[{M(Oxidation (M))|F}H]|[RQ]}N{I|L};[{I|L}T]PER{[{M(Oxidation (M))|F}H]|[RQ]}QV;[{I|L}T][WE]HTVQ{I|L};[{I|L}T]PER[WE]PV;[{I|L}T]PER{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}N;[{I|L}T]P{I|L}[DG]{[{M(Oxidation (M))|F}H]|[RQ]}N{I|L};[{I|L}T]PER[WE]VP 3.3033;3.2406;2.9109;2.7848;2.7221;2.5054;2.4077;2.3924;2.3203;2.2779 -;-;-;+;-;-;-;-;-;- + 598 + 1 1.792 95273.9 1.0 4842 4598 9428 HBL1_DMSO_200M_050219_2,9442 HBL1_DMSO_200M_050219_2,9442,LTPERFHNL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9443 51.418 800.0 158470.0 25 0 14944.0 + 28831 QADREKETDL 10 141 602.7945502936457 1203.5745476540912 2 602.7956420779228 MULTI CID FTMS 0 0 0 9428 104258.890625 0.9444618307607012 1 -0.108123779296875 15 Unmodified _QADREKETDL_ REV__ENSG00000125352|ENST00000371442|RNF113A 13.90604991867851 0.6142120002215601 4 C{I|L}PVER{I|L} 7 -1 33.982 0.0 0.0 2.8234 0.0 0.0 375.1257694331912 0.0 375.1257694331912 0.0 20.029513889941555 0.0 0.0 0 0.4247425010840047 0.0 0.2614393726401688 0.4247425010840047 C{I|L}PVER{I|L} 2.8234 - 1282 + 1 1.792 91458.2 0.5299999713897705 4843 4598 9428 HBL1_DMSO_200M_050219_2,9443 HBL1_DMSO_200M_050219_2,9443,QADREKETDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9444 51.429 658.0 268790.0 25 0 12468.0 + 17802 KQLAEDVKL 9 208 348.5413357124036 1042.6021777374108 3 348.5413390994072 MULTI CID FTMS 0 0 0 9428 87257.359375 1.0 0 0.0 16 Unmodified _KQLAEDVKL_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 10.073929032068715 0.563993802247229 4 {I|L} 1 8 9.2082 0.0 0.0 0.88319 0.0 0.0 911.5072508348702 0.0 911.5072508348702 0.0 0.1738105312960591 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.88319 + + 54 + 1 1.792 148191.9 1.0 4844 4598 9428 HBL1_DMSO_200M_050219_2,9444 HBL1_DMSO_200M_050219_2,9444,KQLAEDVKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9446 51.433 15.0 4384000.0 25 0 653920.0 + 41779 VPVGKVLKV 9 68 469.82376476566105 937.632976598122 2 469.8238098025322 MULTI CID FTMS 0 0 0 9445 3911773.75 0.5927748133113525 1 -0.1148910522460937 1 Unmodified _VPVGKVLKV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 49.93300154707207 0.0405168250806675 4 VPV[KG]V{I|L}KV 9 0 + 64.891 0.0 0.0 6.9207 6.9207 92.402 0.0 0.0 0.0 39.94273099358573 16.33008036311672 16.33008036311672 17.53083433768431 0 1.610924374808178 2.0 0.0 0.3252574989159953 + + VPV[KG]V{I|L}KV;[VP][KG]V{I|L}KVV;VVP[KG]V{I|L}KV;[VP][KG]VV{I|L}KV;[K{I|L}][VG]KVPVV;[K{I|L}]AA{I|L}KPVV;[K{I|L}]AAP{I|L}KVV;[K{I|L}]AA{I|L}PKVV;[K{I|L}][VG]VKPVV;[K{I|L}][VG]VPKVV 6.9207;5.0511;4.5225;4.1178;2.3932;2.3932;2.3645;2.2054;2.0721;1.8843 +;-;-;-;-;-;-;-;-;- + 391 + 1 1.792 55439.7 1.0 4845 4599 9445 HBL1_DMSO_200M_050219_2,9446 HBL1_DMSO_200M_050219_2,9446,VPVGKVLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9447 51.435 27.0 1483100.0 25 0 94797.0 + 6451 EAFEHPNVV 9 84 521.2533155916685 1040.492078250137 2 521.2538940310478 MULTI CID FTMS 0 0 0 9445 1973316.625 0.8798312872066729 1 -0.1148910522460937 2 Unmodified _EAFEHPNVV_ ENSG00000135446|ENST00000257904|CDK4;ENST00000551706.1_1_12:58145281-58145962:-|nuORF 54.773552608820026 0.0299037012502309 4 VV 2 7 20.573 0.0 0.0 1.9773 0.0 0.0 824.3441880907604 0.0 824.3441880907604 0.0 5.880456295278407 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + VV 1.9773 + + 619 + 1 1.792 44248.4 1.0 4846 4599 9445 HBL1_DMSO_200M_050219_2,9447 HBL1_DMSO_200M_050219_2,9447,EAFEHPNVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9448 51.436 16.0 4201500.0 25 0 1081000.0 + 15403 IPPDQQRLI 9 44 540.3146414642733 1078.6147299953466 2 540.3141967654228 MULTI CID FTMS 0 0 0 9445 3707085.5 0.1498985711077431 -10 0.9010581970214844 3 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 17.11289562659939 0.3734572693229295 4 {I|L}PPDQ 5 4 60.701 0.0 0.0 5.6277 0.0 0.0 0.0 525.3168429010374 525.3168429010374 44.045612717470206 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPDQ 5.6277 + + 19 + 1 1.792 60597.3 1.0 4847 4599 9445 HBL1_DMSO_200M_050219_2,9448 HBL1_DMSO_200M_050219_2,9448,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9449 51.437 54.0 1651400.0 25 0 274580.0 + 41781 VPVGKVLKV 9 101 313.55164635044093 937.6331096515228 3 313.5512573122978 MULTI CID FTMS 0 0 0 9445 1192463.0 0.7385865291418202 1 -0.1148910522460937 4 Unmodified _VPVGKVLKV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 30.63653989081413 0.1413794767160703 4 VPV[KG]V{I|L}KV 9 0 + 55.262 0.0 0.0 5.8938 5.8938 88.938 0.0 0.0 0.0 39.09887825920684 8.26737603155074 8.26737603155074 20.796896906561024 0 0.7059771852360797 2.0 0.0 0.1861818737241735 + + VPV[KG]V{I|L}KV;VVP[KG]V{I|L}KV 5.8938;3.6758 +;- + 352 + 1 1.792 77275.6 1.0 4848 4599 9445 HBL1_DMSO_200M_050219_2,9449 HBL1_DMSO_200M_050219_2,9449,VPVGKVLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9450 51.439 83.0 821870.0 25 0 105160.0 + 2849 AVARGLPGV 9 72 420.2585821253565 838.502611317513 2 420.2585327029228 MULTI CID FTMS 0 0 0 9445 952590.875 0.7965772397155173 1 -0.1148910522460937 5 Unmodified _AVARGLPGV_ ENST00000373087.6_1_1:37940193-37941091:+|nuORF 48.345845343767074 0.0439967357579942 4 {[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}PGV 9 0 + 56.889 0.0 0.0 6.7846 6.7846 94.009 0.0 0.0 0.0 19.638787285696964 46.84501246997776 19.638787285696964 56.88933438737884 0 1.579689690656103 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}PGV 6.7846 + + 60 1 1.792 60025.8 1.0 4849 4599 9445 HBL1_DMSO_200M_050219_2,9450 HBL1_DMSO_200M_050219_2,9450,AVARGLPGV True True AVARGLPGV 51.439039 420.258532702923 21130016.0 9445.0 ENST00000373087.6_1_1:37940193-37941091:+|nuORF 7.258127530415853 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9451 51.442 161.0 487330.0 25 0 74128.0 -1 0 87 406.7896226408049 811.5646923484097 2 406.7893859744072 MULTI CID FTMS 0 0 0 9445 521819.75 0.5553296236934154 1 -0.1148910522460937 6 4 {I|L}G{I|L}K[R{I|L}]{I|L} 7 -1 + 39.953 0.0 0.0 4.923 4.923 86.015 0.0 0.0 0.0 27.18892252373326 3.767507096020992 3.767507096020992 39.95313236702216 0 0.4247425010840047 0.0 0.0 0.0 {I|L}G{I|L}K[R{I|L}]{I|L} 4.923 - 31 + 1 1.792 66684.3 1.0 4850 4599 9445 HBL1_DMSO_200M_050219_2,9451 HBL1_DMSO_200M_050219_2,9451, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9452 51.444 90.0 681430.0 25 0 37988.0 + 39268 AQNTIVPKV 9 101 485.2900203157619 968.565487698324 2 485.2899047732353 MULTI CID FTMS 0 0 0 9445 307387.34375 0.6117632446927969 -1 0.108123779296875 7 Unmodified _VAASPWLLL_ ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;ENST00000529672.1_1_11:111613245-111618714:-|nuORF;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B 19.438996006549623 0.310492472477042 4 PPK 3 8 24.693 0.0 0.0 2.5494 0.0 0.0 628.3561878888687 0.0 628.3561878888687 0.0 8.427353778890122 0.0 0.0 0 0.0 0.0 0.0 0.0 PPK 2.5494 - 191 1 1.792 53207.0 1.0 4851 4599 9445 HBL1_DMSO_200M_050219_2,9452 HBL1_DMSO_200M_050219_2,9452,VAASPWLLL False False AQNTIVPKV 51.444179 485.289904773235 6183055.0 9445.0 ENSG00000137713|ENST00000527614|PPP2R1B;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;ENST00000529672.1_1_11:111613245-111618714:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 3.1304126183191934 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9453 51.45 311.0 348660.0 25 0 25773.0 + 6646 EAVLSHDEV 9 116 499.7449363707496 997.4753198082992 2 499.7458679080009 MULTI CID FTMS 0 0 0 9445 291156.3125 1.0 0 0.0 8 Unmodified _EAVLSHDEV_ REV__ENSG00000101350|ENST00000375712|KIF3B 18.13498045792455 0.3457906370836843 4 {I|L}P[C(Carbamidomethyl (C))Q][PS]PTV 9 -1 + 53.156 0.0 0.0 5.329 5.329 74.323 0.0 0.0 0.0 30.08372665223653 4.3933269383026285 4.3933269383026285 2.887254899964361 0 0.3252574989159953 1.6989700043360187 0.909097005026964 0.0 {I|L}P[C(Carbamidomethyl (C))Q][PS]PTV;{I|L}P[EP][MD]PTV;{I|L}P[C(Carbamidomethyl (C))Q][PS]PS{I|L};{I|L}P[EP][MD]PS{I|L};{I|L}[WH][MD]PTV;{I|L}[WH][MD]PS{I|L} 5.329;5.0396;4.8886;4.5991;2.3608;1.9203 -;-;-;-;-;- 313 + 1 1.792 85884.1 1.0 4852 4599 9445 HBL1_DMSO_200M_050219_2,9453 HBL1_DMSO_200M_050219_2,9453,EAVLSHDEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9454 51.464 800.0 336250.0 25 0 19378.0 + 32069 RVLPGQAVTGV 11 193 548.8273795666802 1095.6402062001605 2 548.8279296755791 MULTI CID FTMS 0 0 0 9445 236999.28125 0.6487168685287965 -1 0.108123779296875 9 Unmodified _RVLPGQAVTGV_ ENSG00000109674|ENST00000264596|NEIL3 71.70789743142352 0.0274550572689813 4 [RV]{I|L}[PG]QAVTGV 11 0 + 69.644 0.0 0.0 6.3565 6.3565 86.06 0.0 0.0 0.0 8.938429279123866 46.15478198181169 8.938429279123866 9.128498242811006 0 1.7803695511246982 0.6777807052660807 0.3252574989159953 0.3252574989159953 + + [RV]{I|L}[PG]QAVTGV;[RV]{I|L}[PG][AG]AVTGV;[VG]P[R{I|L}]QAVTGV;[RV]{I|L}[PG]QAVGTV;[VG]P[R{I|L}][AG]AVTGV;[RV]{I|L}[PG][AG]AVGTV;{[QG]|[NA]}PAVVVAVTR;{[QG]|[NA]}PAV[R{I|L}]VTGV;[VG]P[R{I|L}]QAVGTV;[RV][QP]{[VA]|[{I|L}G]}AVTGV 6.3565;5.5233;5.3559;5.2767;4.5227;4.4435;4.4084;4.3972;4.2761;4.2092 +;-;-;-;-;-;-;-;-;- + 2052 1 1.792 207005.7 0.959999978542328 4853 4599 9445 HBL1_DMSO_200M_050219_2,9454 HBL1_DMSO_200M_050219_2,9454,RVLPGQAVTGV True True RVLPGQAVTGV 51.463672 548.827929675579 3210346.5 9445.0 ENSG00000109674|ENST00000264596|NEIL3 8.918484369913736 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9455 51.468 221.0 354760.0 25 0 31299.0 + 7047 EELEWTERL 9 99 402.1984341364642 1203.5734730095926 3 402.1987487673759 MULTI CID FTMS 0 0 0 9445 225111.40625 0.748664710570196 1 -0.1148910522460937 10 Unmodified _EELEWTERL_ REV__ENSG00000001497|ENST00000374811|LAS1L;REV__nc|ENSG00000001497|Q9Y4W2-2|LAS1L;REV__nc|ENSG00000001497|Q9Y4W2-3|LAS1L;REV__nc|ENSG00000001497|Q9Y4W2-4|LAS1L 10.823927491677226 0.5436922275383211 4 P{I|L}VE{I|L}R 6 -1 37.956 0.0 0.0 3.1536 0.0 0.0 478.1306762340051 0.0 478.1306762340051 0.0 33.9763846069888 0.0 0.0 0 0.7302046884880937 0.0 0.2887254899964357 0.3054621874040891 P{I|L}VE{I|L}R 3.1536 - 71 + 1 1.792 65744.9 1.0 4854 4599 9445 HBL1_DMSO_200M_050219_2,9455 HBL1_DMSO_200M_050219_2,9455,EELEWTERL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9456 51.475 389.0 292610.0 25 0 26068.0 -1 LPPPPPPAM 9 114 466.7492067760757 931.4838606189514 2 466.7494689822197 MULTI CID FTMS 0 0 0 9445 217145.421875 0.3113461884334746 24 -1.9498748779296875 11 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 93.76273176245871 0.0134559174279925 4 [{I|L}P]PPPPPA{M(Oxidation (M))|F} 9 -1 + 72.961 0.0 0.0 7.8327 7.8327 94.753 0.0 0.0 0.0 29.13811573052314 16.478174818886373 16.478174818886373 17.447274948966935 0 1.8169015600442573 1.6989700043360187 0.0 0.0 [{I|L}P]PPPPPA{M(Oxidation (M))|F};[{I|L}P]PPPP[WE];[{I|L}P][YK]PPA{M(Oxidation (M))|F};[{I|L}P]PP[YK]A{M(Oxidation (M))|F};[{I|L}P]P[YK]PA{M(Oxidation (M))|F};[{I|L}P][YK]P[WE];[{I|L}P]P{[SA]|[TG]}WYV;[PA]PPPPP{I|L}{M(Oxidation (M))|F};[{I|L}P]P[YK][WE];{[HG]|PP}APPPP{I|L}{M(Oxidation (M))|F} 7.8327;5.9597;5.4167;5.2291;4.9532;3.551;3.3386;3.1141;3.0875;2.9799 +;-;-;-;-;-;-;-;-;- + 906 + 1 1.792 90754.4 1.0 4855 4599 9445 HBL1_DMSO_200M_050219_2,9456 HBL1_DMSO_200M_050219_2,9456,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9457 51.478 168.0 453680.0 25 0 60381.0 44960 YPQLKRVWGV 10 97 415.9084068990424 1244.703391297327 3 415.9079772830009 MULTI CID FTMS 0 0 0 9445 195594.21875 0.4177714154394035 -5 0.4510002136230469 12 Unmodified _YPQLKRVWGV_ ENST00000517831.5_1_8:86132826-86132958:+|nuORF 6.1918466704503565 0.6979955778746556 4 YP{M(Oxidation (M))|F} 3 8 42.461 0.0 0.0 3.4113 0.0 0.0 0.0 834.4946217787615 834.4946217787615 27.856668758921828 0.0 0.0 0.0 0 0.3252574989159953 1.3010299956639813 0.0 0.0 YP{M(Oxidation (M))|F} 3.4113 - 310 + 1 1.792 63725.8 1.0 4856 4599 9445 HBL1_DMSO_200M_050219_2,9457 HBL1_DMSO_200M_050219_2,9457,YPQLKRVWGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9458 51.484 334.0 821420.0 25 0 461800.0 + 30923 RKDLICEF 8 114 512.2682993912351 1022.5220458492704 2 512.2680541872978 MULTI CID FTMS 0 0 0 9445 159118.703125 0.3204616504503633 10 -0.939483642578125 13 Unmodified _RKDLICEF_ REV__ENSG00000138399|ENST00000453153|FASTKD1;REV__nc|ENSG00000138399|Q53R41-2|FASTKD1 18.13498045792455 0.6430038125133779 4 MP[W{I|L}]{I|L}ER 7 -1 53.673 0.0 0.0 5.2491 0.0 0.0 0.0 94.0303209894164 94.0303209894164 40.34370471801908 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.6237125054200234 0.7059771852360797 MP[W{I|L}]{I|L}ER 5.2491 - 283 + 1 1.792 214869.1 1.0 4857 4599 9445 HBL1_DMSO_200M_050219_2,9458 HBL1_DMSO_200M_050219_2,9458,RKDLICEF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9459 51.493 406.0 272940.0 25 0 32579.0 41655 VPPTPAEI 8 132 412.2321522631503 822.4497515931006 2 412.2321349978447 MULTI CID FTMS 0 0 0 9445 142775.84375 0.7532816145007503 -1 0.108123779296875 14 Unmodified _VPPTPAEI_ ENSG00000167283|ENST00000300688|ATP5MG;ENSG00000249222|ENST00000505920|ATP5MGL;ENST00000527186.1_1_11:118277587-118279810:+|nuORF;ENST00000534385.1_1_11:118272380-118277824:+|nuORF 14.581692164780916 0.6954967302934248 4 [TP]P[PA]VE{I|L} 8 3 [TP]P[PA]VE + + 15.485 6.7437 0.97543 1.8827 1.8827 44.504 0.0 0.0 0.0 0.0 -7.703037561203843 -7.703037561203843 0.0 0 0.0 0.0 0.0 0.0 [TP]P[PA]VE{I|L} 1.8827 - 174 + 1 1.792 90462.6 1.0 4858 4599 9445 HBL1_DMSO_200M_050219_2,9459 HBL1_DMSO_200M_050219_2,9459,VPPTPAEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9460 51.506 800.0 181390.0 25 0 9827.8 + -1 WLNQYCSHAFY 11 119 744.8239685406369 1487.6333841480737 2 745.3254882693291 MULTI CID FTMS 0 0 0 9445 137192.359375 0.7994424678115164 -2 0.2135467529296875 15 Carbamidomethyl (C) _WLNQYC(Carbamidomethyl (C))SHAFY_ REV__ENSG00000091128|ENST00000388781|LAMB4;REV__ENST00000475469.1_1_7:107703197-107763609:-|nuORF;REV__nc|ENSG00000091128|A4D0S4-3|LAMB4 17.11289562659939 0.6791789249425932 4 {[DA]|[EG]}GVGD{I|L}{[MS]|[{M(Oxidation (M))|F}A]}ENA{M(Oxidation (M))|F}Y 14 -1 + 80.759 0.0 0.0 5.4287 5.4287 70.464 0.0 0.0 0.0 0.5015729364170056 4.862618701688291 0.5015729364170056 0.5015729364170056 0 1.579689690656103 1.154901959985743 1.6976212463643423 0.805462187404089 {[DA]|[EG]}GVGD{I|L}{[MS]|[{M(Oxidation (M))|F}A]}ENA{M(Oxidation (M))|F}Y;{NN|[MP]|[D{I|L}]|[EV]}NGD{I|L}{[MS]|[{M(Oxidation (M))|F}A]}ENA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GGVD{I|L}{[MS]|[{M(Oxidation (M))|F}A]}ENA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}VGD{I|L}{[MS]|[{M(Oxidation (M))|F}A]}ENA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}GVD{I|L}{[MS]|[{M(Oxidation (M))|F}A]}ENA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{I|L}MDEAQQDA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{I|L}MDEAQENA{M(Oxidation (M))|F}Y;{[DA]|[EG]}NVD{I|L}{[MS]|[{M(Oxidation (M))|F}A]}ENA{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}AMDEAQQDA{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}AMDEAQENA{M(Oxidation (M))|F}Y 5.4287;5.3949;5.3944;5.3376;5.3033;5.2668;5.2505;5.2317;5.0549;5.0387 -;-;-;-;-;-;-;-;-;- 7282 1 1.792 103098.3 0.5799999833106995 4859 4599 9445 HBL1_DMSO_200M_050219_2,9460 HBL1_DMSO_200M_050219_2,9460,WLNQYCSHAFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9461 51.51 160.0 486410.0 25 0 47872.0 8702 EVKPQLRPL 9 91 360.556908375809 0 360.5565063357353 PEAK CID FTMS 0 0 0 9445 118766.6640625 0.6923676809128352 1 -0.1148910522460937 16 Unmodified _EVKPQLRPL_ ENSG00000007174|ENST00000262442|DNAH9;nc|ENSG00000007174|Q9NYC9-2|DNAH9 10.823927491677226 0.3028200641087142 4 {I|L}NH 3 8 13.188 0.0 0.0 1.8339 0.0 0.0 67.71775188672207 284.1721590631469 351.889910949869 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}NH 1.8339 - 18 + 1 1.792 71387.4 1.0 4860 4599 9445 HBL1_DMSO_200M_050219_2,9461 HBL1_DMSO_200M_050219_2,9461,EVKPQLRPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9462 51.523 800.0 223380.0 25 0 27516.0 + 30194 QVVGLHATV 9 186 462.2685208017136 922.5224886702272 2 462.2679626345634 MULTI CID FTMS 0 0 0 9445 119365.3203125 0.8044255946019087 1 -0.1148910522460937 17 Unmodified _QVVGLHATV_ ENST00000544920.2_1_15:28560973-28561015:+|nuORF 15.847184025352805 0.4077185912009129 4 {[QV]|[N{I|L}]|[RA]|[KV]}V[NG]TVPG 9 5 19.259 0.0 0.0 2.0876 0.0 0.0 0.0 68.05130182437733 68.05130182437733 6.159580886215178 0.0 0.0 0.0 0 0.1171302707394362 1.3010299956639813 0.3807196863200844 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V[NG]TVPG 2.0876 - 469 + 1 1.792 133977.4 0.5899999737739563 4861 4599 9445 HBL1_DMSO_200M_050219_2,9462 HBL1_DMSO_200M_050219_2,9462,QVVGLHATV False True QVVGLHATV 51.523389 462.267962634563 1208781.25 9445.0 ENST00000544920.2_1_15:28560973-28561015:+|nuORF 1.8058067560195925 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9463 51.538 800.0 268070.0 25 0 19879.0 22821 LRKPFHMKK 9 201 395.57274167745743 1183.6963956325724 3 395.5720092654228 MULTI CID FTMS 0 0 0 9445 99558.71875 0.2082461958328523 2 -0.2125129699707031 18 Unmodified _LRKPFHMKK_ nc|ENSG00000290757|Q5NE16|CTSL3P 7.608950283845883 0.6490595679007971 4 [YR][DV]RVTE 8 8 38.822 0.0 0.0 3.2797 0.0 0.0 0.0 162.15374882055815 162.15374882055815 23.337651939773124 0.0 0.0 0.0 0 0.0 0.0 0.5 1.5941876774005248 [YR][DV]RVTE 3.2797 - 1454 1 1.792 168816.4 0.5 4862 4599 9445 HBL1_DMSO_200M_050219_2,9463 HBL1_DMSO_200M_050219_2,9463,LRKPFHMKK False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9464 51.544 309.0 326250.0 25 0 33536.0 -1 CVAGDECAYF 10 134 596.2272032588287 1190.4398535844573 2 596.2281371951103 MULTI CID FTMS 0 0 0 9445 97704.640625 0.0979512942277773 -2 0.2135467529296875 19 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))VAGDEC(Carbamidomethyl (C))AYF_ ENSG00000124006|ENST00000404537|OBSL1;ENST00000462385.1_1_2:220427921-220430090:-|nuORF;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-2|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1 7.910154910731844 0.6900473968920092 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AE 4 -1 36.893 0.0 0.0 3.0991 0.0 0.0 0.0 728.2371918015073 728.2371918015073 20.021216849972166 0.0 0.0 0.0 0 0.3807196863200844 0.958607314841775 0.0 0.7302046884880937 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AE 3.0991 - 250 1 1.792 77362.6 1.0 4863 4599 9445 HBL1_DMSO_200M_050219_2,9464 HBL1_DMSO_200M_050219_2,9464,CVAGDECAYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9466 51.548 3.4 18961000.0 25 0 3437800.0 + 24411 MFQNRVRPL 9 82 387.5495161221887 1159.626718966766 3 387.5502197146416 MULTI CID FTMS 0 0 0 9465 12513877.0 1.0 0 0.0 1 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 26.88365393820708 0.1891292719743517 4 M{M(Oxidation (M))|F}{I|L} 3 6 26.198 0.0 0.0 2.2592 0.0 0.0 0.0 765.4160111312885 765.4160111312885 19.20818753952375 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{M(Oxidation (M))|F}{I|L} 2.2592 - 44 + 1 1.783 59771.1 1.0 4864 4600 9465 HBL1_DMSO_200M_050219_2,9466 HBL1_DMSO_200M_050219_2,9466,MFQNRVRPL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9467 51.55 27.0 2328400.0 25 0 694080.0 -1 0 68 351.72939146667466 701.4442300001493 2 351.7289611697197 MULTI CID FTMS 0 0 0 9465 2353880.25 0.7189337584441409 1 -0.0976219177246093 2 4 TV{I|L}T[R{I|L}] 6 -1 + 69.698 0.0 0.0 9.9363 9.9363 84.014 0.0 0.0 0.0 36.197887582883936 1.989700043360188 1.989700043360188 1.989700043360188 0 0.4247425010840047 2.0 0.805462187404089 0.5 TV{I|L}T[R{I|L}];TV{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9.9363;9.6527 -;- 62 + 1 1.783 52985.5 1.0 4865 4600 9465 HBL1_DMSO_200M_050219_2,9467 HBL1_DMSO_200M_050219_2,9467, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9468 51.551 18.0 3939800.0 25 0 1183100.0 + 24415 MFQNRVRPL 9 49 580.8205153631565 1159.6264777931128 2 580.8216430544853 MULTI CID FTMS 0 0 0 9465 2839383.0 1.0 0 0.0 3 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 28.486842064014134 0.1687311288560894 4 VR[{I|L}P] 4 5 19.693 0.0 0.0 1.6982 0.0 0.0 676.3100237909629 0.0 676.3100237909629 0.0 0.2287874528033739 0.0 0.0 0 1.0 0.0 0.0 0.0 + VR[{I|L}P] 1.6982 + + 15 + 1 1.783 58790.5 1.0 4866 4600 9465 HBL1_DMSO_200M_050219_2,9468 HBL1_DMSO_200M_050219_2,9468,MFQNRVRPL False True MFQNRVRPL 51.550694 580.821643054485 265193236.0 9465.0 ENST00000564557.1_1_16:58633371-58663636:-|nuORF 7.507475852966309 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9469 51.552 25.0 1703100.0 25 0 121400.0 + 2156 APYPTPAQV 9 71 472.2480499366312 942.4815469400623 2 472.2478515505791 MULTI CID FTMS 0 0 0 9465 2227424.0 0.486110407897103 6 -0.6262741088867188 4 Unmodified _APYPTPAQV_ ENSG00000198807|ENST00000361487|PAX9 18.13498045792455 0.3457906370836843 4 [PA][TP]Y[PA]QV 9 2 + 24.383 0.0 0.0 2.5871 2.5871 70.373 0.0 0.0 0.0 6.747425010840047 6.667724800373453 6.667724800373453 6.020599913279625 0 0.2742275032520141 1.0 0.4247425010840047 0.0 [PA][TP]Y[PA]QV;[PA]Y[TP][PA]QV;{NN|[MP]|[D{I|L}]|[EV]}{[ET]|[MV]}A[PA]QV;[PA]Q{[QS]|[NT]}[VS]QV;[PA]Q[SG]A[VS]QV;[W{I|L}]{[ET]|[MV]}[PA]QV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TP]A[PA]QV;[PA][RN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[TP][PA]QV;{NN|[MP]|[D{I|L}]|[EV]}[WP][VS]QV 2.5871;1.9483;1.8712;1.4976;1.4491;1.1581;1.1296;0.62345;0.46505;0.38806 -;+;-;-;-;-;-;-;-;- + 153 1 1.783 40634.9 1.0 4867 4600 9465 HBL1_DMSO_200M_050219_2,9469 HBL1_DMSO_200M_050219_2,9469,APYPTPAQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9470 51.553 26.0 1772400.0 25 0 139900.0 + 21260 LPDTMSLTV 9 79 488.7531476276548 975.4917423221096 2 488.7531310915947 MULTI CID FTMS 0 0 0 9465 2169999.5 0.5698471981959211 9 -0.8245925903320312 5 Unmodified _LPDTMSLTV_ REV__ENSG00000134376|ENST00000367400|CRB1;REV__nc|ENSG00000134376|P82279-2|CRB1;REV__nc|ENSG00000134376|P82279-3|CRB1;REV__nc|ENSG00000134376|P82279-4|CRB1 30.22481116460888 0.1466181017706357 4 PYA{I|L}{[WT]|[RM]} 6 -1 25.406 0.0 0.0 2.6044 0.0 0.0 226.09568984199376 0.0 226.09568984199376 0.0 3.9524249272868417 0.0 0.0 0 0.0 0.0 0.0 0.0 PYA{I|L}{[WT]|[RM]} 2.6044 - 229 1 1.783 40870.1 1.0 4868 4600 9465 HBL1_DMSO_200M_050219_2,9470 HBL1_DMSO_200M_050219_2,9470,LPDTMSLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9471 51.554 28.0 1977700.0 25 0 566470.0 + 13439 HLPSDFTPA 9 67 492.7431676657054 983.4717823982108 2 492.7429992556572 MULTI CID FTMS 0 0 0 9465 2023797.0 0.879634176302847 -1 0.1148910522460937 6 Unmodified _HLPSDFTPA_ CON__P01966 28.486842064014134 0.1687311288560894 4 {M(Oxidation (M))|F}T[PA] 4 5 25.177 0.0 0.0 2.56 0.0 0.0 549.2553898677481 0.0 549.2553898677481 0.0 11.136218907515314 0.0 0.0 0 0.8494850021680094 0.0 0.5 0.0 + {M(Oxidation (M))|F}T[PA] 2.56 + + 95 1 1.783 46786.9 1.0 4869 4600 9465 HBL1_DMSO_200M_050219_2,9471 HBL1_DMSO_200M_050219_2,9471,HLPSDFTPA False True HLPSDFTPA 51.55423 492.742999255657 39203068.0 9465.0 P01966 5.513958136240642 2.0 True 9.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 9472 51.555 38.0 1663200.0 25 0 238440.0 + 22032 LPPPPPPAM 9 89 458.751710776598 915.488868619996 2 458.7514221072197 MULTI CID FTMS 0 0 0 9465 1535025.75 0.3470649873374276 20 -1.5820884704589844 7 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP 6 3 52.484 0.0 0.0 5.7329 0.0 0.0 0.0 314.11691257868443 314.11691257868443 12.771692520855474 0.0 0.0 0.0 0 1.610924374808178 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.7329 + + 428 1 1.783 53429.4 1.0 4870 4600 9465 HBL1_DMSO_200M_050219_2,9472 HBL1_DMSO_200M_050219_2,9472,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9473 51.557 56.0 899340.0 25 0 133320.0 + 1109 AGPLETAEL 9 82 450.7374175925428 899.4602822518856 2 450.7376586794853 MULTI CID FTMS 0 0 0 9465 1063023.625 0.4677985298558735 -1 0.1148910522460937 8 Unmodified _AGPLETAEL_ REV__ENST00000318562.12_2_11:727090-727309:+|nuORF 36.04419817259434 0.0971720506436186 4 [QP]ETA{I|L}E{I|L} 8 -1 + 54.092 0.0 0.0 6.0138 6.0138 78.96 0.0 0.0 0.0 3.679767852945943 16.40978057358332 3.679767852945943 3.679767852945943 0 0.4247425010840047 0.0 1.25 0.0 [QP]ETA{I|L}E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PTA{I|L}E{I|L};{[CP]|[EA]}GPTA{I|L}E{I|L};[QP]TEA{I|L}E{I|L};[QP]ET{I|L}AE{I|L};[QP]ETAE{I|L}{I|L};[QP]E{I|L}TAE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PT{I|L}AE{I|L};{[CP]|[EA]}GPT{I|L}AE{I|L};[QP]TE{I|L}AE{I|L} 6.0138;5.6047;5.5478;5.4833;5.4061;5.1232;5.0728;4.997;4.9401;4.8756 -;-;-;-;-;-;-;-;-;- 349 1 1.783 46830.9 1.0 4871 4600 9465 HBL1_DMSO_200M_050219_2,9473 HBL1_DMSO_200M_050219_2,9473,AGPLETAEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9474 51.559 81.0 607350.0 25 0 100330.0 + 43693 YAYDGKDYLA 10 74 589.7718690657549 1177.5291851983095 2 589.7719604372978 MULTI CID FTMS 0 0 0 9465 821548.4375 0.407212862310254 2 -0.2338600158691406 9 Unmodified _YAYDGKDYLA_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 28.49450938151212 0.328477364964909 4 [KG]DDYYAY{I|L}A 10 6 + 42.853 0.0 0.0 3.6392 3.6392 69.002 0.0 0.0 0.0 3.7751372576825295 3.754223615526002 3.754223615526002 3.155279824084033 0 0.4124379954164593 0.0 0.7302046884880937 0.0 [KG]DDYYAY{I|L}A;[KG]DDYY{I|L}A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KG]DDYAYY{I|L}A;[KG]DDY{I|L}YA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YD[QT]AY{I|L}A;[KG]DDYYA{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YD[QT]{I|L}A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]DYA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KG]DDYAY{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[WH]{I|L}Y[C(Carbamidomethyl (C))S]E{I|L}A 3.6392;3.3713;3.2341;3.1156;2.9237;2.7777;2.6557;2.5586;2.3725;2.2655 -;-;-;-;-;-;-;-;-;- 250 1 1.783 40821.2 1.0 4872 4600 9465 HBL1_DMSO_200M_050219_2,9474 HBL1_DMSO_200M_050219_2,9474,YAYDGKDYLA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9475 51.561 104.0 602930.0 25 0 48498.0 + 44497 YPASIVHQV 9 114 507.2741310456541 1012.5337091581084 2 507.2742492556572 MULTI CID FTMS 0 0 0 9465 538214.8125 0.4469993440951014 -3 0.3284378051757812 10 Unmodified _YPASIVHQV_ ENSG00000064393|ENST00000406875|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2 65.23502041540118 0.0231836506122253 4 YPAS{I|L}VHQV 9 0 + 85.232 0.0 0.0 8.4177 8.4177 96.743 0.0 0.0 0.0 57.828737252769066 7.346368802282015 7.346368802282015 24.877203139966326 0 0.6989700043360187 2.0 0.0 1.566901560044258 + + YPAS{I|L}VHQV;YPAS{I|L}VH[AG]V;[PA]S{I|L}R{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}[RP]{I|L}SA{[QN]|[E{I|L}]|[KN]};[VS][MT]{I|L}VHQV;[PA]S{I|L}R[EP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[PA][TP]{I|L}{[DS]|[MA]|[CV]|TT}A{[QN]|[E{I|L}]|[KN]};[PA]S{I|L}V{[RE]|[WV]}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T][PG]VHQV;[PA]S{I|L}V[WP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 8.4177;5.9607;2.7851;2.7846;2.2852;2.0374;1.9465;1.9153;1.891;1.1676 +;-;-;-;-;-;-;-;-;- + 451 + 1 1.783 52904.5 1.0 4873 4600 9465 HBL1_DMSO_200M_050219_2,9475 HBL1_DMSO_200M_050219_2,9475,YPASIVHQV True True YPASIVHQV 51.560867 507.274249255657 61246716.0 9465.0 nc|ENSG00000064393|Q9H2X6-3|HIPK2;;ENSG00000064393|ENST00000406875|HIPK2 8.208820343017578 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9476 51.565 196.0 424370.0 25 0 63977.0 + 27688 PLIVLHYP 8 82 476.2849823784856 950.5554118237712 2 476.2847778201103 MULTI CID FTMS 0 0 0 9465 441985.0 1.0 0 0.0 11 Unmodified _PLIVLHYP_ REV__ENST00000490310.1_1_1:149902202-149903022:-|nuORF 17.086550045450526 0.6584923310065985 4 {I|L}PPE 4 -1 51.67 0.0 0.0 5.4358 0.0 0.0 0.0 511.300221011155 511.300221011155 42.27304499207071 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPE 5.4358 - 71 + 1 1.783 67905.2 1.0 4874 4600 9465 HBL1_DMSO_200M_050219_2,9476 HBL1_DMSO_200M_050219_2,9476,PLIVLHYP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9477 51.567 100.0 721550.0 25 0 107750.0 + 33593 SIPEINHRL 9 90 360.20340740135265 0 360.2044860720634 PEAK CID FTMS 0 0 0 9465 401745.96875 0.4570975380414141 -1 0.1148910522460937 12 Unmodified _SIPEINHRL_ ENSG00000171310|ENST00000303694|CHST11;nc|ENSG00000171310|Q9NPF2-2|CHST11 26.020703789607367 0.146491569832683 4 {I|L}NH 3 6 16.682 0.0 0.0 2.3222 0.0 0.0 67.00929168561602 284.17344080142817 351.1827324870442 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + {I|L}NH 2.3222 + + 19 + 1 1.783 70010.5 1.0 4875 4600 9465 HBL1_DMSO_200M_050219_2,9477 HBL1_DMSO_200M_050219_2,9477,SIPEINHRL False True SIPEINHRL 51.566759 360.204486072063 18947514.0 9465.0 nc|ENSG00000171310|Q9NPF2-2|CHST11;;ENSG00000171310|ENST00000303694|CHST11 3.817066431045532 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9478 51.572 296.0 345260.0 25 0 18482.0 34831 SQFPSVLSSI 10 145 532.7849978144286 1063.5554426956571 2 533.2852661013603 MULTI CID FTMS 0 0 0 9465 301535.5625 0.2404597003380193 -2 0.2230148315429687 13 Unmodified _SQFPSVLSSI_ ENSG00000277481|ENST00000620267|PKD1L3 30.63653989081413 0.2803493085145199 4 {[TV]|[{I|L}S]}[PG]VYTTN{I|L} 10 7 + 41.424 0.0 0.0 3.8949 3.8949 64.196 0.0 0.0 0.0 5.4722822398021975 0.3888763921199683 0.3888763921199683 0.3888763921199683 0 0.3585380453316206 1.2218487496163564 1.100576203518622 0.0 {[TV]|[{I|L}S]}[PG]VYTTN{I|L};{[TV]|[{I|L}S]}[PG]VYT{I|L}SQ;[EP]KVYTTN{I|L};[EP]KVYT{I|L}SQ;{NN|[MP]|[D{I|L}]|[EV]}[KP]YTTN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KP]YT{I|L}SQ;[VP]{[SA]|[TG]}VYTTN{I|L};[VP]{[SA]|[TG]}VYT{I|L}SQ;[TP][VG]VYTTN{I|L};[TP][VG]VYT{I|L}SQ 3.8949;3.8583;3.3803;3.3438;2.6489;2.6124;1.8549;1.8184;1.7724;1.7359 -;-;-;-;-;-;-;-;-;- 1399 1 1.783 84032.1 1.0 4876 4600 9465 HBL1_DMSO_200M_050219_2,9478 HBL1_DMSO_200M_050219_2,9478,SQFPSVLSSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9479 51.575 150.0 485390.0 25 0 45141.0 + 645 AELPGGRSLV 10 83 499.7859016272389 997.5572503212776 2 499.7848998904228 MULTI CID FTMS 0 0 0 9465 260872.90625 0.7419187926570069 -1 0.1148910522460937 14 Unmodified _AELPGGRSLV_ ENST00000588681.5_1_19:11493544-11493772:-|nuORF 24.99096001346401 0.4071966087057876 4 {[CP]|[EA]}{I|L}V[RN]PTV 9 5 + 31.985 0.0 0.0 3.2063 3.2063 70.195 0.0 0.0 0.0 5.642492736872601 4.771212547196626 4.771212547196626 4.771212547196626 0 0.0 0.0 0.7614393726401688 0.4247425010840047 {[CP]|[EA]}{I|L}V[RN]PTV;{[CP]|[EA]}{I|L}V[RN]PS{I|L};{[CP]|[EA]}{I|L}PN[RV]TV;{[CP]|[EA]}{I|L}PN[RV]S{I|L};{[CP]|[EA]}{I|L}PGG[RV]TV;{[CP]|[EA]}{I|L}PGG[RV]S{I|L} 3.2063;2.7281;2.0345;1.5562;1.1114;0.63312 -;-;-;-;-;- 91 + 1 1.783 59014.5 1.0 4877 4600 9465 HBL1_DMSO_200M_050219_2,9479 HBL1_DMSO_200M_050219_2,9479,AELPGGRSLV False True AELPGGRSLV 51.575176 499.784899890423 2794801.5 9465.0 ENST00000588681.5_1_19:11493544-11493772:-|nuORF 1.3227555553118389 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9480 51.588 763.0 221100.0 25 0 28267.0 + 21747 LPMDYVQRV 9 128 568.791907663459 1135.569262393718 2 568.7923461794853 MULTI CID FTMS 0 0 0 9465 238001.171875 1.0 0 0.0 15 Oxidation (M) _LPM(Oxidation (M))DYVQRV_ ENSG00000179115|ENST00000314606|FARSA;nc|ENSG00000179115|Q9Y285-2|FARSA 45.69961567697781 0.0497987121815769 4 {I|L}P{M(Oxidation (M))|F}DYVQRV 9 0 + 91.185 0.0 0.0 8.0299 8.0299 91.907 0.0 0.0 0.0 79.40183064911727 11.226598650221163 11.226598650221163 9.208187539523747 0 0.6694451763165201 2.0 0.0 0.9698565171985376 + + {I|L}P{M(Oxidation (M))|F}DYVQRV;{I|L}P{M(Oxidation (M))|F}DYV[AG]RV;{I|L}P{M(Oxidation (M))|F}DYV[RN]{I|L};{I|L}P{M(Oxidation (M))|F}V{[YD]|[{M(Oxidation (M))|F}M]}QRV;{I|L}P{M(Oxidation (M))|F}DN[Y{I|L}]RV;{I|L}P{M(Oxidation (M))|F}D[RV]{I|L}NY;{I|L}P{M(Oxidation (M))|F}V{[YD]|[{M(Oxidation (M))|F}M]}[AG]RV;{I|L}P{M(Oxidation (M))|F}V[RD]{I|L}NY;{I|L}P{M(Oxidation (M))|F}DGG[Y{I|L}]RV;{I|L}P{M(Oxidation (M))|F}V{[YD]|[{M(Oxidation (M))|F}M]}[RN]{I|L} 8.0299;7.219;6.8529;5.4853;5.1201;5.1044;4.6744;4.32;4.3092;4.3083 +;-;-;-;-;-;-;-;-;- + 725 + 1 1.783 133265.8 1.0 4878 4600 9465 HBL1_DMSO_200M_050219_2,9480 HBL1_DMSO_200M_050219_2,9480,LPMDYVQRV True False LPMDYVQRV 51.588395 568.792346179485 7312307.5 9465.0 ENSG00000179115|ENST00000314606|FARSA;;nc|ENSG00000179115|Q9Y285-2|FARSA 8.316954453786215 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9481 51.593 238.0 757560.0 25 0 202360.0 + 32577 SATVFRTV 8 126 440.7480741842021 879.4815954352041 2 440.7477599978447 MULTI CID FTMS 0 0 0 9465 225039.46875 1.0 0 0.0 16 Unmodified _SATVFRTV_ ENSG00000112078|ENST00000373731|KCTD20;ENST00000481911.5_1_6:36446898-36449467:+|nuORF;nc|ENSG00000112078|Q7Z5Y7-3|KCTD20 24.020572477871973 0.5389365498350341 4 {[SA]|[TG]}TVHRP{I|L} 8 3 + 57.177 0.0 0.0 6.5012 6.5012 82.254 0.0 0.0 0.0 46.208056475053496 7.732320520919238 7.732320520919238 4.771212547196619 0 0.7614393726401688 2.0 0.0 0.0 {[SA]|[TG]}TVHRP{I|L};{[SA]|[TG]}THVRP{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}P{I|L};[HA]{[MG]|[TS]}VRP{I|L};[HA]{[WT]|[RM]}RP{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}R[WY]{I|L} 6.5012;5.9587;0.64262;0.48665;0.30034;0.057569 -;-;-;-;-;- 240 + 1 1.783 144730.1 1.0 4879 4600 9465 HBL1_DMSO_200M_050219_2,9481 HBL1_DMSO_200M_050219_2,9481,SATVFRTV False True SATVFRTV 51.592851 440.747759997845 1561091.125 9465.0 nc|ENSG00000112078|Q7Z5Y7-3|KCTD20;;ENSG00000112078|ENST00000373731|KCTD20;;ENST00000481911.5_1_6:36446898-36449467:+|nuORF 4.264386892318726 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9482 51.607 800.0 343180.0 25 0 41383.0 + 18029 KSLGSLPKV 9 169 464.7948834281596 927.5752139231192 2 464.7951537966728 MULTI CID FTMS 0 0 0 9465 192545.625 0.8239404426868242 -2 0.2230148315429687 17 Unmodified _KSLGSLPKV_ ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA 43.9818466556824 0.0535980856389242 4 KS{I|L}G{[TV]|[{I|L}S]}PKV 9 0 + 31.94 0.0 0.0 3.4433 3.4433 69.362 0.0 0.0 0.0 16.477375924967163 12.252684618815096 12.252684618815096 3.712725460977346 0 1.6307196863200843 0.0 0.0 0.1643943297944484 + + KS{I|L}G{[TV]|[{I|L}S]}PKV;VTKG{[TV]|[{I|L}S]}PKV;K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[TV]|[{I|L}S]}PKV;KS{I|L}G{[TV]|[{I|L}S]}V[KP];VTKG{[TV]|[{I|L}S]}V[KP] 3.4433;3.0431;2.2258;1.0287;0.62842 +;-;-;-;- + 692 + 1 1.783 209851.8 0.8600000143051147 4880 4600 9465 HBL1_DMSO_200M_050219_2,9482 HBL1_DMSO_200M_050219_2,9482,KSLGSLPKV True True KSLGSLPKV 51.606667 464.795153796673 7375624.0 9465.0 nc|ENSG00000011007|Q14241-1|ELOA;;ENSG00000011007|ENST00000613537|ELOA 5.922971884409587 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9483 51.62 800.0 324930.0 25 0 31978.0 + 32398 RYVDRVTEF 9 219 395.5401914436948 1183.5987449312845 3 395.5396301150322 MULTI CID FTMS 0 0 0 9465 154366.0 0.5103528634582886 -1 0.1148910522460937 18 Unmodified _RYVDRVTEF_ ENSG00000108465|ENST00000338399|CDK5RAP3;ENST00000582482.1_1_17:46058511-46058865:+|nuORF;nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;nc|ENSG00000108465|Q96JB5-3|CDK5RAP3;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 69.33821966488729 0.021354776001734 4 [YR]VDRVTE{M(Oxidation (M))|F} 9 0 + 88.534 0.0 0.0 7.48 7.48 90.717 0.0 0.0 0.0 19.532796692927263 63.20591145540389 19.532796692927263 9.208187539523747 0 0.9247425010840048 1.0969100130080565 1.174742501084005 1.3996498648046138 + + [YR]VDRVTE{M(Oxidation (M))|F};[YR]VD[VG]VTE{M(Oxidation (M))|F};[Y{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RVTE{M(Oxidation (M))|F};[YR]VDRKNS{M(Oxidation (M))|F};[Y{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VG]VTE{M(Oxidation (M))|F};[YR]VD[VG]KNS{M(Oxidation (M))|F};[YR]VDRKGGS{M(Oxidation (M))|F};[YR]VD[VG]KGGS{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}[RV][MT]VTE{M(Oxidation (M))|F};[Y{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RKNS{M(Oxidation (M))|F} 7.48;6.702;5.6792;5.2247;4.9012;4.4467;4.4467;3.6724;3.5299;3.4238 +;-;-;-;-;-;-;-;-;- + 2543 1 1.783 203228.6 0.6800000071525574 4881 4600 9465 HBL1_DMSO_200M_050219_2,9483 HBL1_DMSO_200M_050219_2,9483,RYVDRVTEF True True RYVDRVTEF 51.620482 395.539630115032 4592084.1875 9465.0 ENST00000582482.1_1_17:46058511-46058865:+|nuORF;;nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;;nc|ENSG00000108465|Q96JB5-4|CDK5RAP3;;ENSG00000108465|ENST00000338399|CDK5RAP3;;nc|ENSG00000108465|Q96JB5-3|CDK5RAP3 7.268588383992513 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9484 51.628 323.0 355800.0 25 0 30145.0 + 31598 RQTFVIHKL 9 142 381.2332361279397 1140.6778789840191 3 381.2330200076103 MULTI CID FTMS 0 0 0 9465 150836.53125 0.7102448041274158 -1 0.1148910522460937 19 Unmodified _RQTFVIHKL_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 39.21299971606389 0.0797768173001226 4 {[{M(Oxidation (M))|F}H]|[RQ]}T{M(Oxidation (M))|F}V{I|L} 6 3 36.194 0.0 0.0 3.1731 0.0 0.0 0.0 393.2269872206004 393.2269872206004 13.926879134909086 0.0 0.0 0.0 0 1.1421590589602533 0.0 0.5387254899964358 0.0 + {[{M(Oxidation (M))|F}H]|[RQ]}T{M(Oxidation (M))|F}V{I|L} 3.1731 + + 132 1 1.783 99368.9 1.0 4882 4600 9465 HBL1_DMSO_200M_050219_2,9484 HBL1_DMSO_200M_050219_2,9484,RQTFVIHKL True True RQTFVIHKL 51.627828 381.23302000761 1513348.0 9465.0 ENSG00000163535|ENST00000357799|SGO2;;nc|ENSG00000163535|Q562F6-2|SGO2 7.481535911560059 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9485 51.642 800.0 101550.0 25 0 6280.9 43524 WWWWIWWQWW 10 91 874.9046277023125 1747.794702471425 2 874.9053832888603 MULTI CID FTMS 0 0 0 9465 128801.4609375 1.0 0 0.0 20 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 4 [VP]QN{M(Oxidation (M))|F}PG[HT]AN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 16 15 + 52.175 0.0 0.0 2.9852 2.9852 71.255 0.0 0.0 0.0 4.321713114046233 30.364744231378182 4.321713114046233 6.197887582883936 0 0.8494850021680094 0.9208187539523752 0.0 0.7742275032520141 [VP]QN{M(Oxidation (M))|F}PG[HT]AN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}PG[HT]AN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]QN{M(Oxidation (M))|F}PG[HT]AN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}PG[HT]AN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[VP]QN{M(Oxidation (M))|F}PG[HT]AHRQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[VP]QN{M(Oxidation (M))|F}PG{[{M(Oxidation (M))|F}H]|[RQ]}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}PG[HT]AHRQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[VP]QN{M(Oxidation (M))|F}P[EP]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[VP]QN{M(Oxidation (M))|F}PG{[QD]|[EN]|[WG]|[KD]|[RS]}[MN]{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[VP]QN{M(Oxidation (M))|F}PG[YN][NP]{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.9852;2.6306;2.2839;1.9293;1.9025;1.6139;1.5479;1.5132;1.3862;1.3026 -;-;-;-;-;-;-;-;-;- 1344 1 1.783 60317.5 0.7200000286102295 4883 4600 9465 HBL1_DMSO_200M_050219_2,9485 HBL1_DMSO_200M_050219_2,9485,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 9487 51.646 1.6 28540000.0 25 0 5805600.0 + 37058 TGFSPRQI 8 55 453.2455627525363 904.4765725718726 2 453.2459289431572 MULTI CID FTMS 0 0 0 9486 38881536.0 1.0 0 0.0 1 Unmodified _TGFSPRQI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 36.12702656103203 0.299085846329477 4 TG{M(Oxidation (M))|F}SP 5 3 62.435 0.0 0.0 6.9029 0.0 0.0 0.0 412.2319429986938 412.2319429986938 55.44531259372398 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 + TG{M(Oxidation (M))|F}SP 6.9029 + + 66 + 1 1.773 41036.4 1.0 4884 4601 9486 HBL1_DMSO_200M_050219_2,9487 HBL1_DMSO_200M_050219_2,9487,TGFSPRQI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9488 51.647 4.7 9033700.0 25 0 526350.0 + 2488 AQYEHDLEV 9 69 552.2538586682393 1102.4931644032786 2 552.2540771365166 MULTI CID FTMS 0 0 0 9486 12465409.0 1.0 0 0.0 2 Unmodified _AQYEHDLEV_ ENSG00000132341|ENST00000543796|RAN;ENST00000413691.2_1_4:174554896-174555010:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 31.26834338654808 0.1333407332142048 4 [HD]EY{I|L}E[QA]V 9 7 + 39.9 0.0 0.0 3.619 3.619 64.291 0.0 0.0 0.0 5.6424927368726046 25.920234257298283 5.6424927368726046 0.796896906561031 0 0.5 0.0 0.3807196863200844 0.0 [HD]EY{I|L}E[QA]V;[HD]EY[QA]{I|L}EV;[HD]EY{I|L}[QA]EV;[HD]E{I|L}YE[QA]V;[HD]E{I|L}Y[QA]EV;[HD]EY{I|L}EV[QA];[HD]E{I|L}EY[QA]V;[HD]E{I|L}YEV[QA];{NN|[MP]|[D{I|L}]|[EV]}W{[QD]|[EN]|[WG]|[KD]|[RS]}E[QA]V;{NN|[MP]|[D{I|L}]|[EV]}W{[QD]|[EN]|[WG]|[KD]|[RS]}[QA]EV 3.619;3.5468;3.5468;3.346;3.2737;2.7328;2.712;2.4597;2.1913;2.1191 -;-;-;-;-;-;-;-;-;- 246 1 1.773 42173.9 1.0 4885 4601 9486 HBL1_DMSO_200M_050219_2,9488 HBL1_DMSO_200M_050219_2,9488,AQYEHDLEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9489 51.648 15.0 3072700.0 25 0 289640.0 + 2169 AQAEVYKEL 9 64 525.7770040325356 1049.5394551318711 2 525.7773315310478 MULTI CID FTMS 0 0 0 9486 4050209.5 0.8692025178957932 1 -0.1362380981445312 3 Unmodified _AQAEVYKEL_ ENSG00000169710|ENST00000306749|FASN 27.22323531849824 0.1848086127304535 4 [QA]AEVY 6 3 49.579 0.0 0.0 4.7239 0.0 0.0 0.0 385.208469526625 385.208469526625 33.10844378363523 0.0 0.0 0.0 0 1.2302046884880935 0.8860566476931632 0.0 0.0 + [QA]AEVY 4.7239 + + 124 + 1 1.773 41992.7 1.0 4886 4601 9486 HBL1_DMSO_200M_050219_2,9489 HBL1_DMSO_200M_050219_2,9489,AQAEVYKEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9490 51.649 20.0 2462700.0 25 0 307830.0 + 4491 DAYELKHAL 9 89 530.2775837918252 1058.5406146504504 2 530.2775146365166 MULTI CID FTMS 0 0 0 9486 2274959.75 0.5899513430642018 1 -0.1362380981445312 4 Unmodified _DAYELKHAL_ ENSG00000164111|ENST00000296511|ANXA5;ENST00000513428.5_1_4:122602814-122617744:-|nuORF 49.93300154707207 0.0405168250806675 4 {[DA]|[EG]}YE{I|L}KHA{I|L} 9 0 + 74.579 0.0 0.0 7.0455 7.0455 93.922 0.0 0.0 0.0 52.695407399542304 11.42667503568731 11.42667503568731 27.702789364562065 0 1.0941876774005248 1.6989700043360187 0.3494850021680094 0.0 + + {[DA]|[EG]}YE{I|L}KHA{I|L};{[DA]|[EG]}{I|L}[YE]KHA{I|L};{[DA]|[EG]}{I|L}[HN][{I|L}T]Y{I|L} 7.0455;4.4284;1.9484 +;-;- + 146 + 1 1.773 41487.0 1.0 4887 4601 9486 HBL1_DMSO_200M_050219_2,9490 HBL1_DMSO_200M_050219_2,9490,DAYELKHAL True True DAYELKHAL 51.649492 530.277514636517 53393084.0 9486.0 ENST00000513428.5_1_4:122602814-122617744:-|nuORF;;ENSG00000164111|ENST00000296511|ANXA5 9.755519072214762 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9491 51.651 29.0 1507600.0 25 0 132540.0 + 35095 SQVPEVTTV 9 75 480.2560706118581 958.497588290516 2 480.2561523318291 MULTI CID FTMS 0 0 0 9486 1618129.75 1.0 0 0.0 5 Unmodified _SQVPEVTTV_ ENSG00000196455|ENST00000356763|PIK3R4 32.78568957990786 0.1150597335874693 4 [YR]VNTV 6 6 27.752 0.0 0.0 2.8954 0.0 0.0 0.0 223.07317529849848 223.07317529849848 7.786596949921215 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.5 0.0 [YR]VNTV 2.8954 - 181 + 1 1.773 37660.0 1.0 4888 4601 9486 HBL1_DMSO_200M_050219_2,9491 HBL1_DMSO_200M_050219_2,9491,SQVPEVTTV True True SQVPEVTTV 51.650671 480.256152331829 12390141.0 9486.0 ENSG00000196455|ENST00000356763|PIK3R4 6.467283407847087 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9492 51.653 116.0 758370.0 25 0 135870.0 + 9940 FPGKHFQEI 9 120 368.19447723393614 1101.5616023020084 3 368.1942626833916 MULTI CID FTMS 0 0 0 9486 470825.15625 0.048820744042098 -20 1.5362701416015625 6 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 29.84058131909904 0.1515068451768857 4 QE{I|L}{M(Oxidation (M))|F} 4 7 40.79 0.0 0.0 3.7029 0.0 0.0 566.298143455275 0.0 566.298143455275 0.0 17.88023703596813 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.9247425010840048 QE{I|L}{M(Oxidation (M))|F} 3.7029 - 328 1 1.773 75195.1 1.0 4889 4601 9486 HBL1_DMSO_200M_050219_2,9492 HBL1_DMSO_200M_050219_2,9492,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9493 51.663 572.0 338510.0 25 0 17453.0 -1 LGVCVCGAIYT 11 180 578.2815174456143 1154.5484819580286 2 578.2816039919853 MULTI CID FTMS 0 0 0 9486 358488.8125 0.3910215620762693 -7 0.66351318359375 7 Carbamidomethyl (C) _LGVC(Carbamidomethyl (C))VCGAIYT_ ENSG00000133460|ENST00000316185|SLC2A11;ENST00000461809.5_1_22:24225898-24227033:+|nuORF;ENST00000489322.5_1_22:24226412-24227033:+|nuORF;nc|ENSG00000133460|Q9BYW1-4|SLC2A11;nc|ENSG00000133460|Q9BYW1|SLC2A11 13.90604991867851 0.7458848613461305 4 {[VA]|[{I|L}G]}V[HS]QP[PA]{[{M(Oxidation (M))|F}C]|[YS]} 11 -1 + 33.688 0.0 0.0 2.9178 2.9178 72.033 0.0 0.0 0.0 6.943158318641643 7.758947927111116 6.943158318641643 7.086073148417757 0 0.3252574989159953 2.0 0.0 0.4247425010840047 {[VA]|[{I|L}G]}V[HS]QP[PA]{[{M(Oxidation (M))|F}C]|[YS]};{[VA]|[{I|L}G]}[HK]W[HK]{[{M(Oxidation (M))|F}C]|[YS]};[W{M(Oxidation (M))|F}]S{I|L}PA{I|L}HGQ;[W{M(Oxidation (M))|F}]S{I|L}PA{I|L}HAN;[Y{I|L}]QR{[SA]|[TG]}[PA]{[{M(Oxidation (M))|F}C]|[YS]};[Y{I|L}]QD[KA][PA]{[{M(Oxidation (M))|F}C]|[YS]};[PA]{[RE]|[WV]}APP[PA]{[{M(Oxidation (M))|F}C]|[YS]};{[QN]|[E{I|L}]|[KN]}NPAPP[PA]{[{M(Oxidation (M))|F}C]|[YS]};{NN|[MP]|[D{I|L}]|[EV]}[HK]QP[PA]{[{M(Oxidation (M))|F}C]|[YS]};[K{I|L}][HD]QP[PA]{[{M(Oxidation (M))|F}C]|[YS]} 2.9178;2.3041;2.1533;1.6455;1.6137;1.6137;0.82833;0.76803;0.67633;0.40332 -;-;-;-;-;-;-;-;-;- 2359 1 1.773 149453.4 1.0 4890 4601 9486 HBL1_DMSO_200M_050219_2,9493 HBL1_DMSO_200M_050219_2,9493,LGVCVCGAIYT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9494 51.665 79.0 692010.0 25 0 55226.0 -1 IPIDDLTMV 9 79 516.7694632482632 1031.5243735633262 2 516.7689086794853 MULTI CID FTMS 0 0 0 9486 338731.5 0.2413482825439641 -2 0.2125129699707031 8 Oxidation (M) _IPIDDLTM(Oxidation (M))V_ ENSG00000074276|ENST00000261944|CDHR2 28.486842064014134 0.1687311288560894 4 {I|L}P{I|L}G 4 -1 54.68 0.0 0.0 5.3009 0.0 0.0 0.0 648.2634981744749 648.2634981744749 42.89773867511221 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P{I|L}G 5.3009 - 30 + 1 1.773 49199.9 1.0 4891 4601 9486 HBL1_DMSO_200M_050219_2,9494 HBL1_DMSO_200M_050219_2,9494,IPIDDLTMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9495 51.676 631.0 197560.0 25 0 12054.0 + 30295 QYQDNIKEL 9 142 575.7902488815489 1149.5659448298975 2 575.7904540896416 MULTI CID FTMS 0 0 0 9486 283173.28125 0.6961612790589136 1 -0.1362380981445312 9 Unmodified _QYQDNIKEL_ ENSG00000090889|ENST00000374403|KIF4A;nc|ENSG00000090889|O95239-2|KIF4A 45.69961567697781 0.0497987121815769 4 {[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))NN{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 4 + 34.478 0.0 0.0 2.9992 2.9992 65.909 0.0 0.0 0.0 2.5414316035763136 0.7378621416091846 0.7378621416091846 2.5414316035763136 0 0.0 0.6989700043360187 0.1382104921644452 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))NN{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[YQ]QDN{I|L}{[VA]|[{I|L}G]}S{I|L};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))NN{I|L}{M(Oxidation (M))|F}[Q{I|L}];[YQ]QDN{I|L}{[VA]|[{I|L}G]}TV;{[QN]|[E{I|L}]|[KN]}[CG]NN{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))NGG{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))GGN{I|L}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[YQ][AG]DN{I|L}{[VA]|[{I|L}G]}S{I|L};[YQ]QDGG{I|L}{[VA]|[{I|L}G]}S{I|L};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))GGN{I|L}{M(Oxidation (M))|F}[Q{I|L}] 2.9992;2.7781;2.7373;2.432;2.1982;2.1982;2.1982;1.9809;1.9809;1.9363 -;-;-;-;-;-;-;-;-;- 2703 1 1.773 95368.4 1.0 4892 4601 9486 HBL1_DMSO_200M_050219_2,9495 HBL1_DMSO_200M_050219_2,9495,QYQDNIKEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9496 51.68 220.0 432630.0 25 0 29551.0 15791 ISEMKYFAE 9 122 559.2648619502157 0 559.2648803591728 PEAK CID FTMS 0 0 0 9486 285360.90625 1.0 0 0.0 10 Unmodified _ISEMKYFAE_ ENSG00000162929|ENST00000402291|SANBR;nc|ENSG00000162929|Q6NSI8-2|SANBR;nc|ENSG00000162929|Q6NSI8-3|SANBR;nc|ENSG00000162929|Q6NSI8-4|SANBR 15.847184025352805 0.2451986057151378 4 DH 2 9 14.068 0.0 0.0 1.26 0.0 0.0 113.04049423909028 748.3406466119749 861.3811408510652 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.5 0.0 DH 1.26 - 192 + 1 1.773 77796.6 1.0 4893 4601 9486 HBL1_DMSO_200M_050219_2,9496 HBL1_DMSO_200M_050219_2,9496,ISEMKYFAE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9497 51.685 277.0 464230.0 25 0 46184.0 -1 IMPYYIGLV 9 123 542.7934218667502 1083.5722908003004 2 542.7931396365166 MULTI CID FTMS 0 0 0 9486 284630.9375 0.0153658874158099 -11 1.0832405090332031 11 Oxidation (M) _IM(Oxidation (M))PYYIGLV_ ENSG00000171385|ENST00000302127|KCND3;nc|ENSG00000171385|Q9UK17-2|KCND3 20.871210003555333 0.2717241269066626 4 YPPPE[RN]{I|L}V 9 -1 + 79.377 0.0 0.0 7.3255 7.3255 92.883 0.0 0.0 0.0 55.897141724246 13.46787486224656 13.46787486224656 13.914435517118577 0 1.2302046884880935 2.0 0.0 0.3252574989159953 YPPPE[RN]{I|L}V;YPPPE[RN]V{I|L};YPPPS[WK]P{I|L};YPP{I|L}E[RV][NP];YP{I|L}PE[RV][NP];YPP[H{I|L}][{M(Oxidation (M))|F}T]P{I|L};Y[YK]E[RN]{I|L}V;Y[YK]E[RN]V{I|L};[Q{I|L}]A{I|L}{[MG]|[TS]}PQQV;[DP]{[QN]|[E{I|L}]|[KN]}E[RN]{I|L}V 7.3255;6.0414;5.0043;4.5786;4.3008;2.8584;2.7371;1.453;1.4404;1.3267 -;-;-;-;-;-;-;-;-;- 912 + 1 1.773 107318.9 1.0 4894 4601 9486 HBL1_DMSO_200M_050219_2,9497 HBL1_DMSO_200M_050219_2,9497,IMPYYIGLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9498 51.697 698.0 320930.0 25 0 59303.0 9514 FLECFLVSNI 10 160 592.8073071345287 0 592.8073608279228 PEAK CID FTMS 0 0 0 9486 239176.6875 1.0 0 0.0 12 Unmodified _FLECFLVSNI_ ENST00000531695.1_1_8:61769417-61773873:+|nuORF 22.736283301280096 0.276231959287006 4 PYVD[YV]{M(Oxidation (M))|F}GV 9 9 18.226 0.0 0.0 1.5398 0.0 0.0 59.04696226502308 82.06701837711171 141.11398064213478 0.0 0.0 0.0 0.0 0 1.0010912013506126 0.0 0.0 0.0 PYVD[YV]{M(Oxidation (M))|F}GV 1.5398 - 555 + 1 1.773 165251.1 1.0 4895 4601 9486 HBL1_DMSO_200M_050219_2,9498 HBL1_DMSO_200M_050219_2,9498,FLECFLVSNI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9499 51.699 69.0 1193600.0 25 0 116110.0 + 42553 VTPKEFREI 9 93 373.54465659487033 0 373.5444213747978 PEAK CID FTMS 0 0 0 9486 225679.25 1.0 0 0.0 13 Unmodified _VTPKEFREI_ ENSG00000143799|ENST00000366794|PARP1 20.41453444215458 0.197313647343139 4 E 1 8 8.9794 0.0 0.0 1.2052 0.0 0.0 530.9423272504845 82.06703363590077 613.0093608863853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + E 1.2052 + + 42 + 1 1.773 75899.3 1.0 4896 4601 9486 HBL1_DMSO_200M_050219_2,9499 HBL1_DMSO_200M_050219_2,9499,VTPKEFREI False True VTPKEFREI 51.698967 373.544421374798 1964581.0 9486.0 ENSG00000143799|ENST00000366794|PARP1 -0.448066492875417 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9500 51.713 765.0 416770.0 25 0 54700.0 + 32222 RVYEEFTKV 9 161 585.8110558257655 1169.607558718331 2 585.8116943240166 MULTI CID FTMS 0 0 0 9486 188102.1875 0.3249063702758174 -1 0.0976219177246093 14 Unmodified _RVYEEFTKV_ ENSG00000149262|ENST00000534064|INTS4;nc|ENSG00000149262|Q96HW7-2|INTS4 57.24910588100465 0.0276051374632116 4 [RV]YEE{M(Oxidation (M))|F}TKV 9 0 + 67.48 0.0 0.0 5.7694 5.7694 78.353 0.0 0.0 0.0 3.957713472593397 14.09256854528806 3.957713472593397 3.957713472593397 0 1.424742501084005 0.0 0.7742275032520141 0.5189301784845296 + + [RV]YEE{M(Oxidation (M))|F}TKV;[KT]{M(Oxidation (M))|F}[NG]E{M(Oxidation (M))|F}TKV;[YQ][KQ]E{M(Oxidation (M))|F}TKV;[KT]{M(Oxidation (M))|F}{[WN]|[YH]}{M(Oxidation (M))|F}TKV;{NN|[MP]|[D{I|L}]|[EV]}[YR]E{M(Oxidation (M))|F}TKV;[{M(Oxidation (M))|F}T]K[NG]E{M(Oxidation (M))|F}TKV;VV[WY]E{M(Oxidation (M))|F}TKV;[RV]YET{M(Oxidation (M))|F}EKV;[{M(Oxidation (M))|F}T][W{I|L}]E{M(Oxidation (M))|F}TKV;[{M(Oxidation (M))|F}T]K{[WN]|[YH]}{M(Oxidation (M))|F}TKV 5.7694;5.431;4.9708;4.8726;4.6457;4.5107;4.4148;4.0742;4.0237;3.9522 +;-;-;-;-;-;-;-;-;- + 1408 1 1.773 235864.9 1.0 4897 4601 9486 HBL1_DMSO_200M_050219_2,9500 HBL1_DMSO_200M_050219_2,9500,RVYEEFTKV True True RVYEEFTKV 51.713402 585.811694324017 3681757.75 9486.0 nc|ENSG00000149262|Q96HW7-2|INTS4;;ENSG00000149262|ENST00000534064|INTS4 6.194592634836833 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9501 51.715 56.0 966120.0 25 0 80888.0 -1 TVTLHCEV 8 82 479.7365594847557 957.4585660363114 2 479.7349731326103 MULTI CID FTMS 0 0 0 9486 148940.0 0.1038595532100649 -4 0.4260597229003906 15 Carbamidomethyl (C) _TVTLHC(Carbamidomethyl (C))EV_ ENSG00000143297|ENST00000361835|FCRL5;ENSG00000150337|ENST00000369168|FCGR1A;ENST00000472543.1_1:120928502-120934612:-|nuORF;nc|ENSG00000143297|Q96RD9-3|FCRL5;nc|ENSG00000143297|Q96RD9-4|FCRL5;nc|ENSG00000150337|P12314-2|FCGR1A;nc|ENSG00000291135|Q92637-2|FCGR1BP;nc|ENSG00000291135|Q92637|FCGR1BP 14.581692164780916 0.6954967302934248 4 [EP]VTN 5 -1 28.389 0.0 0.0 2.9651 0.0 0.0 0.0 414.1822348197677 414.1822348197677 7.757883221333557 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.5 0.0 [EP]VTN 2.9651 - 226 1 1.773 48700.4 1.0 4898 4601 9486 HBL1_DMSO_200M_050219_2,9501 HBL1_DMSO_200M_050219_2,9501,TVTLHCEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9502 51.729 800.0 209130.0 25 0 23325.0 + -1 VEMMEQSQQ 9 162 571.2275561780962 1140.4405594229922 2 571.2272827029228 MULTI CID FTMS 0 0 0 9486 134617.140625 1.0 0 0.0 16 2 Oxidation (M) _VEM(Oxidation (M))M(Oxidation (M))EQSQQ_ REV__ENSG00000115685|ENST00000234038|PPP1R7;REV__ENST00000498170.5_1_2:242089910-242097991:+|nuORF;REV__nc|ENSG00000115685|Q15435-3|PPP1R7 8.745405648335112 0.6093864874670651 4 VE 2 -1 36.815 0.0 0.0 3.2282 0.0 0.0 0.0 909.307291709396 909.307291709396 22.061245316836583 0.0 0.0 0.0 0 0.3639829889124311 0.7958800173440752 0.4247425010840047 0.0 VE 3.2282 + + 172 + 1 1.773 128714.3 0.7900000214576721 4899 4601 9486 HBL1_DMSO_200M_050219_2,9502 HBL1_DMSO_200M_050219_2,9502,VEMMEQSQQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9503 51.735 360.0 129870.0 25 0 11233.0 + + 28340 AQIEVVPSASA 11 99 536.7884231577099 0 536.7880737185478 PEAK CID FTMS 0 0 0 9486 109524.359375 1.0 0 0.0 17 Unmodified _PSASPVPFISA_ ENST00000495231.1_1_14:35209757-35209856:-|nuORF;ENSG00000197958|ENST00000361436|RPL12 12.240655878213236 0.4295705806160874 4 V 1 -1 9.877 0.0 0.0 0.92173 0.0 0.0 213.11717727069464 756.3569429986936 969.4741202693884 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 V 0.92173 + + 64 + 1 1.773 44031.4 1.0 4900 4601 9486 HBL1_DMSO_200M_050219_2,9503 HBL1_DMSO_200M_050219_2,9503,PSASPVPFISA False False AQIEVVPSASA 51.73515 536.287 1685048.875 9486.0 ENST00000495231.1_1_14:35209757-35209856:-|nuORF;;ENSG00000197958|ENST00000361436|RPL12 5.17634375890096 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9504 51.749 800.0 79338.0 25 0 3838.2 + 32199 RVVDELDNQM 10 105 609.7928654394397 1217.5711779456792 2 609.7916747927666 MULTI CID FTMS 0 0 0 9486 96010.6640625 0.0038784772164974 9 -0.7487220764160156 18 Unmodified _RVVDELDNQM_ ENSG00000085231|ENST00000380822|AK6;nc|ENSG00000085231|Q9Y3D8-2|AK6 24.881564428377168 0.4096545554397951 4 DE{I|L}DNQM 7 3 57.383 0.0 0.0 4.7129 0.0 0.0 354.23839003730626 0.0 354.23839003730626 0.0 50.39336051466137 0.0 0.0 0 0.5484550065040282 0.0 0.3807196863200844 0.0 + DE{I|L}DNQM 4.7129 + + 459 1 1.773 52398.2 0.7099999785423279 4901 4601 9486 HBL1_DMSO_200M_050219_2,9504 HBL1_DMSO_200M_050219_2,9504,RVVDELDNQM False True RVVDELDNQM 51.748989 609.791674792767 746085632.0 9486.0 nc|ENSG00000085231|Q9Y3D8-2|AK6;;ENSG00000085231|ENST00000380822|AK6 9.490877469380695 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9505 51.764 800.0 342690.0 25 0 47705.0 18481 KYLKEWKP 8 257 364.5456079956589 1090.6149945871766 3 364.5455505251884 MULTI CID FTMS 0 0 0 9486 103792.2109375 1.0 0 0.0 19 Unmodified _KYLKEWKP_ ENST00000418983.1_1_6:29760019-29760421:-|nuORF 25.399314129420983 0.5099049743284904 4 [YK]{I|L}EKWKP 8 2 + 32.112 0.0 0.0 2.9444 2.9444 68.723 0.0 0.0 0.0 0.345397765017406 4.129712596891153 0.345397765017406 4.144068328487123 0 0.0 0.0 0.4247425010840047 0.5010912013506126 [YK]{I|L}EKWKP;[YK]{I|L}KYYT{I|L};[YK]{I|L}ET{[NV]|[RG]}KP;[YK]{I|L}ET[RK]GP;[YK]{I|L}KEWKP;[YK]{I|L}YYKT{I|L};[YK]{I|L}EK{[QV]|[N{I|L}]|[RA]|[KV]}SP;[YK]{I|L}[{I|L}A][C(Carbamidomethyl (C))K]VP;[YK]K{I|L}YYT{I|L};[YK]KNT{[NV]|[RG]}KP 2.9444;2.5644;2.46;2.4101;2.4041;2.2548;1.4874;1.1495;1.0802;0.97583 -;-;-;-;+;-;-;-;-;- + 1348 + 1 1.773 214472.5 0.550000011920929 4902 4601 9486 HBL1_DMSO_200M_050219_2,9505 HBL1_DMSO_200M_050219_2,9505,KYLKEWKP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9506 51.778 800.0 77215.0 25 0 6796.7 -1 AQCLELLIEN 10 109 601.8054000686487 1201.5962472040974 2 601.8038207888603 MULTI CID FTMS 0 0 0 9486 97097.484375 0.9126625516675791 1 -0.1362380981445312 20 Carbamidomethyl (C) _AQC(Carbamidomethyl (C))LELLIEN_ ENSG00000146809|ENST00000451215|ASB15 5.296884461304476 0.7021353017287152 4 V 1 -1 10.713 0.0 0.0 0.89159 0.0 0.0 1084.51664775517 0.0 1084.51664775517 0.0 -0.9691001300805624 -0.9691001300805624 0.0 0 0.0 0.0 0.0 0.0 V 0.89159 - 100 + 1 1.773 50694.1 0.6800000071525574 4903 4601 9486 HBL1_DMSO_200M_050219_2,9506 HBL1_DMSO_200M_050219_2,9506,AQCLELLIEN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9508 51.782 4.1 15280000.0 25 0 3806800.0 + 15404 IPPDQQRLI 9 39 540.3146414642733 1078.6147299953466 2 540.3142578005791 MULTI CID FTMS 0 0 0 9507 14345076.0 0.5800530888300199 -7 0.7163848876953125 1 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 18.1463463914782 0.3454829746528889 4 {I|L}PPD 4 5 56.186 0.0 0.0 5.2091 0.0 0.0 0.0 653.3740486091143 653.3740486091143 44.59183145787911 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPD 5.2091 + + 15 + 1 1.774 59316.5 1.0 4904 4602 9507 HBL1_DMSO_200M_050219_2,9508 HBL1_DMSO_200M_050219_2,9508,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9509 51.784 74.0 569330.0 25 0 65424.0 40931 VLSSVAADPL 10 77 486.2733449635756 970.5321369939512 2 486.2748901247978 MULTI CID FTMS 0 0 0 9507 352545.78125 0.6886158683493488 1 -0.1189537048339843 2 Unmodified _VLSSVAADPL_ ENST00000593972.1_1_19:41305435-41306505:+|nuORF 13.042465956692816 0.6287021003332052 4 [MT]PR[VS]PA{I|L} 9 7 + 26.19 0.0 0.0 2.6985 2.6985 77.402 0.0 0.0 0.0 5.642492736872601 11.145807094548598 5.642492736872601 16.079053973095192 0 0.9247425010840048 0.0 0.0 0.0 [MT]PR[VS]PA{I|L};[KP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RP[DV] 2.6985;1.0418 -;- 90 + 1 1.774 40882.1 1.0 4905 4602 9507 HBL1_DMSO_200M_050219_2,9509 HBL1_DMSO_200M_050219_2,9509,VLSSVAADPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9510 51.787 143.0 614830.0 25 0 51570.0 44684 YPFKPPKVRN 10 94 415.9084068990424 1244.703391297327 3 415.9085265994072 MULTI CID FTMS 0 0 0 9507 420304.625 0.8977323523371148 -2 0.2338600158691406 3 Unmodified _YPFKPPKVRN_ ENST00000495141.5_1_3:23848730-23929256:+|nuORF 12.872603262515298 0.6315522313594999 4 YP{M(Oxidation (M))|F} 3 7 45.916 0.0 0.0 3.6889 0.0 0.0 0.0 834.4977065820341 834.4977065820341 23.02378753635658 0.0 0.0 0.0 0 0.5994850021680094 1.5228787452803376 0.0 0.0 + YP{M(Oxidation (M))|F} 3.6889 + + 179 + 1 1.774 76750.3 1.0 4906 4602 9507 HBL1_DMSO_200M_050219_2,9510 HBL1_DMSO_200M_050219_2,9510,YPFKPPKVRN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9511 51.79 149.0 389610.0 25 0 32601.0 + 41600 VPPLATNTV 9 103 456.2635930417542 910.5126331503084 2 456.2639953494072 MULTI CID FTMS 0 0 0 9507 318992.84375 0.0488126580565225 -9 0.8460617065429688 4 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 38.15118350030904 0.0856056900103839 4 [VP]Q{I|L}N{[QN]|[E{I|L}]|[KN]}V 8 4 + 38.594 0.0 0.0 4.2387 4.2387 66.946 0.0 0.0 0.0 1.2248627423174625 11.682437647924218 1.2248627423174625 1.2248627423174625 0 0.0 2.0 0.0 0.0 [VP]Q{I|L}N{[QN]|[E{I|L}]|[KN]}V;[{I|L}P]PATNVTV;[{I|L}P]APTNVTV;[VP]AG{I|L}N{[QN]|[E{I|L}]|[KN]}V;[VP][VS]PNVTV;[VP]P[VS]NVTV;[VP]Q{I|L}GG{[QN]|[E{I|L}]|[KN]}V;[PA]{I|L}PTNVTV;[{I|L}P]PATGGVTV;[{I|L}P]ATPNVTV 4.2387;4.1041;3.9108;3.7649;3.3867;3.2495;3.2214;3.1244;3.0928;3.0561 -;-;-;-;-;-;-;-;-;- 500 1 1.774 47788.9 1.0 4907 4602 9507 HBL1_DMSO_200M_050219_2,9511 HBL1_DMSO_200M_050219_2,9511,VPPLATNTV True True VPPLATNTV 51.789731 456.263995349407 287046091.5 9507.0 nc|ENSG00000136715|Q9H0E3-2|SAP130;;ENSG00000136715|ENST00000643581|SAP130;;nc|ENSG00000136715|Q9H0E3-3|SAP130;;nc|ENSG00000136715|Q9H0E3|SAP130 5.684320131937663 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9512 51.803 757.0 269880.0 25 0 37614.0 + 12738 GVNGGRGG 8 143 673.3402142563647 672.3329377897646 1 674.3489257693291 MULTI CID FTMS 0 0 0 9507 253316.078125 0.1893118129369745 -9 0.8460617065429688 5 Unmodified _GVNGGRGG_ REV__ENSG00000135316|ENST00000369622|SYNCRIP;REV__nc|ENSG00000271793|O60506-2|SYNCRIP 0.7936320650641473 0.8195151834710337 4 {NN|[MP]|[D{I|L}]|[EV]}AQRA 6 -1 + 35.34 0.0 0.0 5.2563 5.2563 80.877 0.0 0.0 0.0 0.3027184400547611 8.68440000316717 0.3027184400547611 8.327731244245342 0 0.0 1.2218487496163564 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}AQRA;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QV]|[N{I|L}]|[RA]|[KV]}VA;{NN|[MP]|[D{I|L}]|[EV]}A[AG]RA;{[QN]|[E{I|L}]|[KN]}GQRA;{[QN]|[E{I|L}]|[KN]}G[AG]RA;{[QN]|[E{I|L}]|[KN]}HQ{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[R{I|L}]GA;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[VA]|[{I|L}G]}RA;[{I|L}P]GC(Carbamidomethyl (C))RA;{NN|[MP]|[D{I|L}]|[EV]}{I|L}T[DP] 5.2563;4.0177;3.8552;3.6694;2.2683;2.2599;1.9666;1.8986;1.8489;1.6498 -;-;-;-;-;-;-;-;-;- 925 1 1.774 148165.1 1.0 4908 4602 9507 HBL1_DMSO_200M_050219_2,9512 HBL1_DMSO_200M_050219_2,9512,GVNGGRGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9513 51.817 800.0 335290.0 25 0 65815.0 -1 0 88 1104.4594797661937 3310.3566098987803 3 1104.794482409954 MULTI CID FTMS 0 0 0 9507 229884.578125 0.8990560182912879 -2 0.2338600158691406 6 4 V{M(Oxidation (M))|F}{I|L}D 4 -1 22.384 0.0 0.0 0.67617 0.0 0.0 2206.861017932141 626.2409637075417 2833.1019816396824 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.0 V{M(Oxidation (M))|F}{I|L}D 0.67617 - 1086 + 1 1.774 191359.2 0.7699999809265137 4909 4602 9507 HBL1_DMSO_200M_050219_2,9513 HBL1_DMSO_200M_050219_2,9513, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9514 51.831 800.0 217390.0 25 0 14703.0 + 23630 LTQEQLHQL 9 193 555.3008034935053 1108.5870540538106 2 555.3009521365166 MULTI CID FTMS 0 0 0 9507 177790.125 1.0 0 0.0 7 Unmodified _LTQEQLHQL_ ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 99.7552728972412 0.0110101799492648 4 {I|L}TQEQ{I|L}HQ{I|L} 9 0 + 92.438 0.0 0.0 8.3383 8.3383 92.433 0.0 0.0 0.0 50.587454451529645 9.653500133247732 9.653500133247732 9.208187539523747 0 0.8252574989159953 2.0 0.8807196863200843 1.329689690656103 + + {I|L}TQEQ{I|L}HQ{I|L};{I|L}T[AG]EQ{I|L}HQ{I|L};{I|L}TQE[AG]{I|L}HQ{I|L};{I|L}TQEQ{I|L}H[AG]{I|L};{I|L}TQEQ{I|L}HAAV;{I|L}TQEQ[YK]S{I|L};{I|L}T[AG]E[AG]{I|L}HQ{I|L};{I|L}T[AG]EQ{I|L}H[AG]{I|L};{I|L}TQEQ[YK]TV;{I|L}TQE[AG]{I|L}H[AG]{I|L} 8.3383;7.5077;7.5077;7.2603;6.8394;6.7405;6.681;6.4336;6.3196;6.1402 +;-;-;-;-;-;-;-;-;- + 5976 + 1 1.774 132456.0 0.959999978542328 4910 4602 9507 HBL1_DMSO_200M_050219_2,9514 HBL1_DMSO_200M_050219_2,9514,LTQEQLHQL True True LTQEQLHQL 51.830547 555.300952136517 1121917.25 9507.0 nc|ENSG00000204843|Q14203-3|DCTN1;;ENSG00000204843|ENST00000628224|DCTN1;;nc|ENSG00000204843|Q14203-4|DCTN1;;nc|ENSG00000204843|Q14203-2|DCTN1;;nc|ENSG00000204843|Q14203-6|DCTN1;;nc|ENSG00000204843|Q14203-5|DCTN1 6.903085390726726 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9515 51.837 345.0 395170.0 25 0 31163.0 -1 LPPPPPPAM 9 142 466.7492067760757 931.4838606189514 2 466.7493774294853 MULTI CID FTMS 0 0 0 9507 157168.9375 0.2253510537234944 27 -2.1638641357421875 8 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 79.93452657146344 0.0175326119056068 4 [{I|L}P]PPPPPA{M(Oxidation (M))|F} 9 -1 + 72.342 0.0 0.0 7.7663 7.7663 94.269 0.0 0.0 0.0 22.63219278023277 14.91361693834272 14.91361693834272 14.91361693834272 0 1.675833702434617 1.6989700043360187 0.0 0.0 [{I|L}P]PPPPPA{M(Oxidation (M))|F};[{I|L}P]PPPPP{M(Oxidation (M))|F}A;[{I|L}P]PPPP[WE];[{I|L}P][YK]PPA{M(Oxidation (M))|F};[{I|L}P]PP[YK]A{M(Oxidation (M))|F};[{I|L}P]P[YK]PA{M(Oxidation (M))|F};[{I|L}P]PPPP{M(Oxidation (M))|F}PA;[{I|L}P][YK]PP{M(Oxidation (M))|F}A;[{I|L}P]PP[YK]{M(Oxidation (M))|F}A;[{I|L}P]P[YK]P{M(Oxidation (M))|F}A 7.7663;6.1652;5.7042;5.4654;5.303;5.2694;5.0472;3.8643;3.7019;3.6684 +;-;-;-;-;-;-;-;-;- + 1780 + 1 1.774 108877.4 1.0 4911 4602 9507 HBL1_DMSO_200M_050219_2,9515 HBL1_DMSO_200M_050219_2,9515,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9516 51.845 470.0 302360.0 25 0 39876.0 + 21843 LPPATQVV 8 170 412.7477448982944 823.4809368633888 2 412.7474853396416 MULTI CID FTMS 0 0 0 9507 147206.5 0.6139554658215941 -4 0.4568748474121094 9 Unmodified _LPPATQVV_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 42.96799951952854 0.1846367511955703 4 [PA]PTQ{I|L}VV 8 3 + 32.212 0.0 0.0 3.9117 3.9117 69.959 0.0 0.0 0.0 3.6761009415293344 9.419628234359578 3.6761009415293344 3.226825097560422 0 0.5682503180159344 0.585026652029182 1.0044321917401078 0.0 [PA]PTQ{I|L}VV;[PA]PT{I|L}QVV;[{I|L}P][PA]TQVV;{[HG]|PP}ATQ{I|L}VV;[TP]PAQ{I|L}VV;[PA]P{I|L}TQVV;[PA]PT[AG]{I|L}VV;{[HG]|PP}TAQ{I|L}VV;{[HG]|PP}AT{I|L}QVV;[TP]PA{I|L}QVV 3.9117;3.5198;3.4653;3.0495;2.9618;2.8096;2.7869;2.7737;2.6577;2.57 -;-;+;-;-;-;-;-;-;- + 457 1 1.774 112949.4 1.0 4912 4602 9507 HBL1_DMSO_200M_050219_2,9516 HBL1_DMSO_200M_050219_2,9516,LPPATQVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9517 51.86 800.0 72575.0 25 0 2559.2 -1 TKIYSTCTDFE 11 96 682.8076943126064 0 682.8072387576103 PEAK CID FTMS 0 0 0 9507 153850.375 0.8274657729143777 1 -0.1189537048339843 10 Carbamidomethyl (C) _TKIYSTC(Carbamidomethyl (C))TDFE_ ENSG00000116675|ENST00000371069|DNAJC6;nc|ENSG00000116675|O75061-3|DNAJC6;nc|ENSG00000116675|O75061-4|DNAJC6;nc|ENSG00000116675|O75061|DNAJC6 7.608950283845883 0.472344094183283 4 T[EP]D[EP]{I|L}T 8 -1 22.479 0.0 0.0 1.6485 0.0 0.0 353.108265748888 125.07256494693594 478.1808306958239 0.0 0.0 0.0 0.0 0 1.6307196863200843 0.0 1.110023343740972 0.0 T[EP]D[EP]{I|L}T 1.6485 - 98 + 1 1.774 50649.8 0.8500000238418579 4913 4602 9507 HBL1_DMSO_200M_050219_2,9517 HBL1_DMSO_200M_050219_2,9517,TKIYSTCTDFE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9518 51.862 93.0 544090.0 25 0 45442.0 + 9095 FFIETGRPK 9 71 547.8034947607346 1093.592436588269 2 547.8038818240166 MULTI CID FTMS 0 0 0 9507 146775.953125 0.3978803992908206 -1 0.1362380981445312 11 Unmodified _FFIETGRPK_ ENST00000412272.6_1_10:69832876-69833427:-|nuORF 24.881564428377168 0.2146028316269493 4 TE{I|L}{M(Oxidation (M))|F}E 5 8 49.706 0.0 0.0 4.5452 0.0 0.0 456.28129775215 0.0 456.28129775215 0.0 44.22167511924052 0.0 0.0 0 0.75 0.0 0.4247425010840047 0.0 TE{I|L}{M(Oxidation (M))|F}E 4.5452 - 118 1 1.774 43432.0 1.0 4914 4602 9507 HBL1_DMSO_200M_050219_2,9518 HBL1_DMSO_200M_050219_2,9518,FFIETGRPK False True FFIETGRPK 51.862134 547.803881824017 8021299.5 9507.0 ENST00000412272.6_1_10:69832876-69833427:-|nuORF 6.735206604003906 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9519 51.876 800.0 117430.0 25 0 15246.0 -1 0 84 678.6396008711598 2032.8969732136795 3 678.6400634646416 MULTI CID FTMS 0 0 0 9507 148849.734375 1.0 0 0.0 12 4 Y 1 -1 10.278 0.0 0.0 0.50556 0.0 0.0 1851.822340500592 0.0 1851.822340500592 0.0 0.0167395809274673 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.50556 - 52 + 1 1.774 81948.1 0.800000011920929 4915 4602 9507 HBL1_DMSO_200M_050219_2,9519 HBL1_DMSO_200M_050219_2,9519, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9520 51.883 313.0 629230.0 25 0 57291.0 -1 SQRAFCTMHFY 11 149 732.3127787141924 1462.6110044951847 2 732.3129760622978 MULTI CID FTMS 0 0 0 9507 132857.9375 0.0470771646428563 -4 0.4568748474121094 13 Carbamidomethyl (C),Oxidation (M) _SQRAFC(Carbamidomethyl (C))TM(Oxidation (M))HFY_ ENST00000277415.15_1_9:137989658-137989826:+|nuORF 12.240655878213236 0.7805268987462184 4 {[QN]|[E{I|L}]|[KN]}NHEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 108.06 0.0 0.0 7.3882 7.3882 84.021 0.0 0.0 0.0 3.8841508844903103 5.167118777434752 3.8841508844903103 3.8841508844903103 0 1.1989700043360187 0.0 1.622363747448347 1.8243923658886183 {[QN]|[E{I|L}]|[KN]}NHEAQQNA{M(Oxidation (M))|F}Y;[AG]A{M(Oxidation (M))|F}{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;[AG]AEMYAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQ[HD]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}NHEAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}NHEA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}NHEAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]A{M(Oxidation (M))|F}{M(Oxidation (M))|F}EAQQGGA{M(Oxidation (M))|F}Y;[AG]A{M(Oxidation (M))|F}{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F}Y;[HS][PG]DEAQQNA{M(Oxidation (M))|F}Y 7.3882;7.1227;6.9961;6.7699;6.7662;6.7662;6.7662;6.5024;6.5024;6.4605 -;-;-;-;-;-;-;-;-;- 8506 1 1.774 141917.4 1.0 4916 4602 9507 HBL1_DMSO_200M_050219_2,9520 HBL1_DMSO_200M_050219_2,9520,SQRAFCTMHFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9521 51.897 800.0 127820.0 25 0 8875.5 + -1 MLASPAML 8 142 425.21400574675954 0 425.2096740603447 PEAK CID FTMS 0 0 0 -1 0 14 Oxidation (M) _MLASPAM(Oxidation (M))L_ REV__ENST00000216190.12_1_22:36906978-36907630:-|nuORF 11.114462752807354 0.5290325060821968 4 Y 1 -1 6.9897 0.0 0.0 0.82386 0.0 0.0 616.2883345142238 66.03576074771718 682.324095261941 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.82386 - 33 + 1 1.774 84099.2 0.5600000023841858 4917 4602 9507 HBL1_DMSO_200M_050219_2,9521 HBL1_DMSO_200M_050219_2,9521,MLASPAML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9523 51.901 54.0 1194500.0 25 0 174230.0 + 24412 MFQNRVRPL 9 77 387.5495161221887 1159.626718966766 3 387.5500366091728 MULTI CID FTMS 0 0 0 9522 530609.0625 0.042401652381592 3 -0.2734603881835937 1 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 15.847184025352805 0.4077185912009129 4 M{M(Oxidation (M))|F}V 3 6 24.693 0.0 0.0 2.1294 0.0 0.0 0.0 779.4151095025999 779.4151095025999 11.505149978319906 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{M(Oxidation (M))|F}V 2.1294 - 34 + 1 1.774 56712.7 1.0 4918 4603 9522 HBL1_DMSO_200M_050219_2,9523 HBL1_DMSO_200M_050219_2,9523,MFQNRVRPL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9524 51.902 50.0 810140.0 25 0 142840.0 + 1110 AGPLETAEL 9 66 450.7374175925428 899.4602822518856 2 450.7378417849541 MULTI CID FTMS 0 0 0 9522 859185.125 0.3780965247588311 2 -0.1713409423828125 2 Unmodified _AGPLETAEL_ REV__ENST00000318562.12_2_11:727090-727309:+|nuORF 36.04419817259434 0.0971720506436186 4 [QP]E{I|L}TAE{I|L} 8 -1 + 51.904 0.0 0.0 5.7706 5.7706 73.935 0.0 0.0 0.0 4.6040937697618745 39.76403468139864 4.6040937697618745 1.5629594754377507 0 0.4247425010840047 0.0 0.7302046884880937 0.0 [QP]E{I|L}TAE{I|L};[QP]ETA{I|L}E{I|L};[QP]{I|L}ETAE{I|L};[QP]ET{I|L}AE{I|L};[QP]ETAE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[QP]TAE{I|L};[VP]AAETAE{I|L};[VP]WWAE{I|L} 5.7706;5.5968;5.4359;5.3238;5.2621;4.8721;4.6019;2.6919 -;-;-;-;-;-;-;- 212 1 1.774 36150.2 1.0 4919 4603 9522 HBL1_DMSO_200M_050219_2,9524 HBL1_DMSO_200M_050219_2,9524,AGPLETAEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9525 51.904 22.0 3246600.0 25 0 251880.0 + 39942 VGAAIKIIR 9 93 314.21522759496986 939.6238533851096 3 314.2148315310478 MULTI CID FTMS 0 0 0 9522 2114595.25 0.2866607425663216 -2 0.2551918029785156 3 Unmodified _VGAAIKIIR_ ENSG00000166848|ENST00000300086|TERF2IP 20.453626601364224 0.2830276176381075 4 K{I|L}K{I|L}R{I|L} 6 6 30.953 0.0 0.0 3.2942 0.0 0.0 170.06954754758493 0.0 170.06954754758493 0.0 17.307904302936162 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.7302046884880937 K{I|L}K{I|L}R{I|L} 3.2942 - 85 + 1 1.774 62495.2 1.0 4920 4603 9522 HBL1_DMSO_200M_050219_2,9525 HBL1_DMSO_200M_050219_2,9525,VGAAIKIIR False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9526 51.905 33.0 1414500.0 25 0 132340.0 + 35008 SQPEKVYTL 9 70 532.7849978144286 1063.5554426956571 2 532.7854492068291 MULTI CID FTMS 0 0 0 9522 1485253.25 0.8467770838192742 1 -0.0848731994628906 4 Unmodified _SQPEKVYTL_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 20.453626601364224 0.2830276176381075 4 [EP]KVYT[SG][{I|L}A] 10 5 + 31.387 0.0 0.0 2.9512 2.9512 69.98 0.0 0.0 0.0 5.019146780584258 1.249387366082999 1.249387366082999 5.019146780584258 0 0.0 0.0 0.7742275032520141 0.0 [EP]KVYT[SG][{I|L}A];{[TV]|[{I|L}S]}[PG]VYT[SG][{I|L}A];{NN|[MP]|[D{I|L}]|[EV]}[KP]YT[SG][{I|L}A] 2.9512;2.4793;1.8254 -;-;- 70 1 1.774 40588.3 1.0 4921 4603 9522 HBL1_DMSO_200M_050219_2,9526 HBL1_DMSO_200M_050219_2,9526,SQPEKVYTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9527 51.906 36.0 1801000.0 25 0 386850.0 + 32682 SDPFTHLAP 9 79 492.7431676657054 983.4717823982108 2 492.7432128787041 MULTI CID FTMS 0 0 0 9522 1502674.75 0.6531307566753665 2 -0.1713409423828125 5 Unmodified _SDPFTHLAP_ ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-2|DICER1 42.09456458481378 0.0639583784996157 4 [PS]D{M(Oxidation (M))|F}TH{I|L}[PA] 9 2 + 42.009 0.0 0.0 4.2715 4.2715 77.371 0.0 0.0 0.0 8.18513709057612 16.947143884496683 8.18513709057612 8.953650195120836 0 0.5 0.744727494896694 1.4489700043360187 0.0 [PS]D{M(Oxidation (M))|F}TH{I|L}[PA];[VS]TMEH{I|L}[PA];{[WT]|[RM]}MEH{I|L}[PA];[PS]D{M(Oxidation (M))|F}[H{I|L}]T[PA];[PS]D[H{I|L}]{M(Oxidation (M))|F}T[PA];[H{I|L}][C(Carbamidomethyl (C))H]H{I|L}[PA];[VS]{I|L}HE[WD]V;[VS]TM[{M(Oxidation (M))|F}T]{I|L}[VS];[PS]D{[ET]|[MV]}H{I|L}[VS];{[WT]|[RM]}M[{M(Oxidation (M))|F}T]{I|L}[VS] 4.2715;3.3611;3.2108;3.1606;2.9816;2.5546;1.8794;1.3275;1.2976;0.23687 -;-;-;-;-;-;-;-;-;- 177 1 1.774 54312.0 1.0 4922 4603 9522 HBL1_DMSO_200M_050219_2,9527 HBL1_DMSO_200M_050219_2,9527,SDPFTHLAP True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9528 51.907 33.0 1111700.0 25 0 100230.0 + 21897 LPPEYASTV 9 56 488.7531476276548 975.4917423221096 2 488.7531616091728 MULTI CID FTMS 0 0 0 9522 1478323.625 0.3882114146722557 12 -0.9377212524414062 6 Unmodified _LPPEYASTV_ ENSG00000178913|ENST00000313368|TAF7 23.1484247019978 0.2366544122328345 4 YAP{I|L}{[WT]|[RM]} 6 7 23.901 0.0 0.0 2.4501 0.0 0.0 226.09492690254064 0.0 226.09492690254064 0.0 2.4472749489669354 0.0 0.0 0 0.0 0.0 0.0 0.0 YAP{I|L}{[WT]|[RM]} 2.4501 - 144 1 1.774 33284.2 1.0 4923 4603 9522 HBL1_DMSO_200M_050219_2,9528 HBL1_DMSO_200M_050219_2,9528,LPPEYASTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9529 51.908 44.0 1578700.0 25 0 262620.0 + 13042 HAVGDIPGV 9 76 432.7324462929546 863.4503396527092 2 432.7325012087822 MULTI CID FTMS 0 0 0 9522 1437872.375 0.0996681459712022 -4 0.4677047729492187 7 Unmodified _HAVGDIPGV_ ENSG00000186468|ENST00000296674|RPS23;ENST00000429775.2_1_X:70182861-70183140:+|nuORF 40.44857923139169 0.0729940656229577 4 [HA]V[DG]{I|L} 6 3 30.691 0.0 0.0 3.5545 0.0 0.0 0.0 268.129573701334 268.129573701334 14.53855500238862 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.3807196863200844 0.0 + [HA]V[DG]{I|L} 3.5545 + + 107 1 1.774 60621.4 1.0 4924 4603 9522 HBL1_DMSO_200M_050219_2,9529 HBL1_DMSO_200M_050219_2,9529,HAVGDIPGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9530 51.91 44.0 1079100.0 25 0 100920.0 + 44498 YPASIVHQV 9 86 507.2741310456541 1012.5337091581084 2 507.2746765017509 MULTI CID FTMS 0 0 0 9522 1204061.75 1.0 0 0.0 8 Unmodified _YPASIVHQV_ ENSG00000064393|ENST00000406875|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2 41.8396318013385 0.0653578398400075 4 YPA{[TV]|[{I|L}S]}VHN{I|L} 9 2 + 71.208 0.0 0.0 7.0326 7.0326 78.517 0.0 0.0 0.0 30.929862658764264 1.4612803567823818 1.4612803567823818 1.4612803567823818 0 0.7742275032520141 2.0 0.0 0.7302046884880937 YPA{[TV]|[{I|L}S]}VHN{I|L};YPA{[TV]|[{I|L}S]}VHQV;YPA{[TV]|[{I|L}S]}VHGG{I|L};YPA{[TV]|[{I|L}S]}VH[AG]V;YPA[HK][PS]T{I|L};YPREVP[PG]V;{NN|[MP]|[D{I|L}]|[EV]}[RP]{[TV]|[{I|L}S]}A{[QN]|[E{I|L}]|[KN]};[PA]S{I|L}VER{[QN]|[E{I|L}]|[KN]};Y[{I|L}T][PG]VHN{I|L};Y[{I|L}T][PG]VHQV 7.0326;6.8883;5.402;5.2577;4.6417;2.9014;2.5611;2.1441;1.891;1.7466 -;+;-;-;-;-;-;-;-;- + 414 + 1 1.774 46349.6 1.0 4925 4603 9522 HBL1_DMSO_200M_050219_2,9530 HBL1_DMSO_200M_050219_2,9530,YPASIVHQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9531 51.911 53.0 1146700.0 25 0 149190.0 + 35410 STIPTKLVS 9 89 473.28450311658895 944.554453299978 2 473.2844726443291 MULTI CID FTMS 0 0 0 9522 882319.4375 0.066640370433143 -7 0.741241455078125 9 Unmodified _STIPTKLVS_ REV__ENSG00000140836|ENST00000268489|ZFHX3 31.26834338654808 0.1333407332142048 4 {[MG]|[TS]}{I|L}PTVTKV 9 -1 + 49.294 0.0 0.0 5.2187 5.2187 84.656 0.0 0.0 0.0 21.990925311194182 11.706962271689749 11.706962271689749 12.730012720637369 0 1.0 0.0 0.3252574989159953 0.0 {[MG]|[TS]}{I|L}PTVTKV;{[MG]|[TS]}{I|L}V[TP]TKV;{[MG]|[TS]}{I|L}PT[K{I|L}]SV;{[MG]|[TS]}{I|L}V[W{I|L}]KV 5.2187;3.871;2.7028;2.3114 -;-;-;- 176 + 1 1.774 52112.4 1.0 4926 4603 9522 HBL1_DMSO_200M_050219_2,9531 HBL1_DMSO_200M_050219_2,9531,STIPTKLVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9532 51.913 106.0 1055800.0 25 0 119740.0 + 14516 IGQIKRIL 8 85 470.81900920968326 939.6234654861664 2 470.8189269900322 MULTI CID FTMS 0 0 0 9522 715107.75 0.2670355122388394 -3 0.352813720703125 10 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 36.04419817259434 0.3004715606373109 4 K{I|L}K 3 -1 31.995 0.0 0.0 3.4051 0.0 0.0 170.06914083211933 397.25693689517817 567.3260777272975 0.0 0.0 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.3807196863200844 K{I|L}K 3.4051 - 150 + 1 1.774 90719.3 1.0 4927 4603 9522 HBL1_DMSO_200M_050219_2,9532 HBL1_DMSO_200M_050219_2,9532,IGQIKRIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9533 51.915 77.0 979750.0 25 0 149790.0 + 22033 LPPPPPPAM 9 111 458.751710776598 915.488868619996 2 459.2528869509697 MULTI CID FTMS 0 0 0 9522 442298.53125 0.17209883799825 23 -1.77191162109375 11 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 4 [{I|L}P]PPPP 6 3 51.176 0.0 0.0 5.59 0.0 0.0 0.0 314.1176447364325 314.1176447364325 14.90276076473168 0.0 0.0 0.0 0 1.2302046884880935 1.5228787452803376 0.0 0.0 + [{I|L}P]PPPP 5.59 + + 236 1 1.774 59589.9 1.0 4928 4603 9522 HBL1_DMSO_200M_050219_2,9533 HBL1_DMSO_200M_050219_2,9533,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9534 51.918 155.0 468320.0 25 0 48610.0 + 17226 KLLGNIKNV 9 116 499.821843738294 997.629134543388 2 499.8216735720634 MULTI CID FTMS 0 0 0 9522 280014.03125 1.0 0 0.0 12 Unmodified _KLLGNIKNV_ ENSG00000100442|ENST00000396062|FKBP3 78.14939416004806 0.0179651292570206 4 [VG]Q{I|L}K{I|L}KNV 9 5 + 49.005 0.0 0.0 4.9121 4.9121 81.08 0.0 0.0 0.0 12.263963773670769 8.5827208845118 8.5827208845118 9.208187539523747 0 1.024227503252014 2.0 0.0 0.6989700043360187 [VG]Q{I|L}K{I|L}KNV;[VG][AG]{I|L}K{I|L}KNV;{[VA]|[{I|L}G]}N{I|L}K{I|L}KNV;{[VA]|[{I|L}G]}{I|L}NK{I|L}KNV;{[VA]|[{I|L}G]}GG{I|L}K{I|L}KNV;{I|L}{I|L}GNK{I|L}KNV;[{I|L}V]ANK{I|L}KNV;[K{I|L}]{I|L}[NG]{I|L}KNV;{[VA]|[{I|L}G]}{I|L}GGK{I|L}KNV;[K{I|L}]QAVVKNV 4.9121;3.9891;3.6828;3.3811;2.7598;2.5833;2.5833;2.5436;2.4581;2.2983 -;-;-;-;-;-;-;+;-;- + 1462 1 1.774 58589.1 1.0 4929 4603 9522 HBL1_DMSO_200M_050219_2,9534 HBL1_DMSO_200M_050219_2,9534,KLLGNIKNV True True KLLGNIKNV 51.918034 499.821673572063 2185148.0 9522.0 ENSG00000100442|ENST00000396062|FKBP3 4.78622833887736 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9535 51.922 237.0 390490.0 25 0 56518.0 21925 LPPHLVIY 8 91 476.2849823784856 950.5554118237712 2 476.2853881716728 MULTI CID FTMS 0 0 0 9522 269413.1875 0.6095527845967623 3 -0.2734603881835937 13 Unmodified _LPPHLVIY_ ENSG00000130414|ENST00000252711|NDUFA10;ENST00000485344.6_1_2:240954116-240964718:-|nuORF;nc|ENSG00000130414|O95299-2|NDUFA10 17.086550045450526 0.6584923310065985 4 {I|L}PPE 4 5 54.68 0.0 0.0 5.7525 0.0 0.0 0.0 511.3024386041624 511.3024386041624 45.07638152291939 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPE 5.7525 - 66 + 1 1.774 73643.3 1.0 4930 4603 9522 HBL1_DMSO_200M_050219_2,9535 HBL1_DMSO_200M_050219_2,9535,LPPHLVIY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9536 51.928 327.0 404050.0 25 0 34869.0 + 42458 VTGISKPVK 9 140 464.7948834281596 927.5752139231192 2 464.7951843142509 MULTI CID FTMS 0 0 0 9522 231897.71875 0.9923357596151025 1 -0.0848731994628906 14 Unmodified _VTGISKPVK_ REV__ENSG00000135912|ENST00000392102|TTLL4 36.506200033944 0.094635877243972 4 K{[QN]|[E{I|L}]|[KN]}[KS]PKV 8 -1 + 27.329 0.0 0.0 2.9463 2.9463 73.177 0.0 0.0 0.0 4.89430170129209 7.152026668771949 4.89430170129209 8.450980400142566 0 1.3807196863200843 0.0 0.0 0.2887254899964357 K{[QN]|[E{I|L}]|[KN]}[KS]PKV;K{[QN]|[E{I|L}]|[KN]}[KS]PVK 2.9463;2.0352 -;- 330 + 1 1.774 103914.5 1.0 4931 4603 9522 HBL1_DMSO_200M_050219_2,9536 HBL1_DMSO_200M_050219_2,9536,VTGISKPVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9537 51.933 222.0 300320.0 25 0 21441.0 + 8354 RLASLQSEV 9 108 501.7819894652978 0 501.7823058962822 PEAK CID FTMS 0 0 0 9522 213936.3125 0.7698113962854989 1 -0.0848731994628906 15 Unmodified _ESALTLRNV_ ENST00000487455.1_1_7:150065323-150066789:+|nuORF;ENST00000397281.6_1_7:150065961-150066789:+|nuORF 20.453626601364224 0.1969592619112565 4 ESQ{I|L}S 5 6 33.003 0.0 0.0 3.2952 0.0 0.0 117.0795296124332 337.19916711978755 454.2786967322208 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.5 0.0 ESQ{I|L}S 3.2952 - 176 + 1 1.774 55168.5 1.0 4932 4603 9522 HBL1_DMSO_200M_050219_2,9537 HBL1_DMSO_200M_050219_2,9537,ESALTLRNV False False RLASLQSEV 51.932582 501.784 2687291.75 9522.0 ENST00000487455.1_1_7:150065323-150066789:+|nuORF;;ENST00000397281.6_1_7:150065961-150066789:+|nuORF 4.996201992034912 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9538 51.946 800.0 198310.0 25 0 21573.0 -1 LPMDYVQRV 9 149 568.791907663459 1135.569262393718 2 568.7927123904228 MULTI CID FTMS 0 0 0 9522 211125.75 0.8870786153560825 3 -0.2734603881835937 16 Oxidation (M) _LPM(Oxidation (M))DYVQRV_ ENSG00000179115|ENST00000314606|FARSA;nc|ENSG00000179115|Q9Y285-2|FARSA 32.78568957990786 0.1150597335874693 4 {I|L}P{M(Oxidation (M))|F}DYVQRV 9 -1 + 72.56 0.0 0.0 6.3898 6.3898 87.806 0.0 0.0 0.0 42.98245664532708 9.067822354009508 9.067822354009508 9.208187539523756 0 0.3807196863200844 2.0 0.0 0.2614393726401688 {I|L}P{M(Oxidation (M))|F}DYVQRV;{I|L}P{M(Oxidation (M))|F}DYV[AG]RV;{I|L}P{M(Oxidation (M))|F}DYV[RV]Q;{I|L}P{M(Oxidation (M))|F}V{[YD]|[{M(Oxidation (M))|F}M]}QRV;{I|L}PV{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}QRV;{I|L}P{M(Oxidation (M))|F}V{[YD]|[{M(Oxidation (M))|F}M]}[AG]RV;{I|L}VP{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}QRV;{I|L}P{M(Oxidation (M))|F}[Y{I|L}][DN]RV;{I|L}P{M(Oxidation (M))|F}V{[YD]|[{M(Oxidation (M))|F}M]}[RV]Q;{I|L}PV{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}[AG]RV 6.3898;5.5789;5.1048;4.4735;3.9433;3.6626;3.2697;3.1974;3.1885;3.1324 +;-;-;-;-;-;-;-;-;- + 1490 + 1 1.774 126212.5 0.9100000262260436 4933 4603 9522 HBL1_DMSO_200M_050219_2,9538 HBL1_DMSO_200M_050219_2,9538,LPMDYVQRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9539 51.96 800.0 124370.0 25 0 13324.0 -1 GAMFSCTECL 10 134 596.2272032588287 1190.4398535844573 2 596.2285644412041 MULTI CID FTMS 0 0 0 9522 209412.59375 0.209941252065357 2 -0.1713409423828125 17 2 Carbamidomethyl (C),Oxidation (M) _GAM(Oxidation (M))FSC(Carbamidomethyl (C))TEC(Carbamidomethyl (C))L_ ENSG00000177370|ENST00000327158|TIMM22 4.3292370932331545 0.7066112369704343 4 {M(Oxidation (M))|F}YDRGVC(Carbamidomethyl (C)){I|L} 8 -1 36.745 0.0 0.0 3.0867 0.0 0.0 161.98637186506636 0.0 161.98637186506636 0.0 26.026457331334854 0.0 0.0 0 0.9802046884880938 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}YDRGVC(Carbamidomethyl (C)){I|L} 3.0867 - 511 + 1 1.774 75465.1 0.8999999761581421 4934 4603 9522 HBL1_DMSO_200M_050219_2,9539 HBL1_DMSO_200M_050219_2,9539,GAMFSCTECL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9540 51.964 208.0 599200.0 25 0 49828.0 12630 GVKTLRTIL 9 144 334.2222141356595 0 334.2223388552666 PEAK CID FTMS 0 0 0 9522 187713.609375 0.7611402489682288 -1 0.1189537048339843 18 Unmodified _GVKTLRTIL_ ENSG00000196218|ENST00000359596|RYR1;nc|ENSG00000196218|P21817-2|RYR1;nc|ENSG00000196218|P21817-3|RYR1 5.230669730166228 0.3444685223463734 4 WREG 4 8 12.652 0.0 0.0 1.8984 0.0 0.0 67.08921484787955 68.05133997134999 135.14055481922952 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WREG 1.8984 - 49 + 1 1.774 102364.3 1.0 4935 4603 9522 HBL1_DMSO_200M_050219_2,9540 HBL1_DMSO_200M_050219_2,9540,GVKTLRTIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9541 51.971 405.0 218070.0 25 0 33712.0 + 39335 VAFRGAGSI 9 113 439.247859943887 876.4811669545741 2 439.2480041384697 MULTI CID FTMS 0 0 0 9522 175013.921875 0.4824051963999586 -2 0.2551918029785156 19 Unmodified _VAFRGAGSI_ ENST00000293618.12_1_12:50794651-50821555:+|nuORF 47.74868867922204 0.0453060283459952 4 VA 2 7 43.46 0.0 0.0 4.9585 0.0 0.0 0.0 703.353128992275 703.353128992275 14.264523572165814 0.0 0.0 0.0 0 0.5501648626366046 1.6989700043360187 0.0 0.0 + VA 4.9585 + + 249 + 1 1.774 70858.2 1.0 4936 4603 9522 HBL1_DMSO_200M_050219_2,9541 HBL1_DMSO_200M_050219_2,9541,VAFRGAGSI True True VAFRGAGSI 51.971442 439.24800413847 2610128.5 9522.0 ENST00000293618.12_1_12:50794651-50821555:+|nuORF 2.273928165435791 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9542 51.982 490.0 293100.0 25 0 23404.0 + 34201 SLPCPRRHL 9 164 360.20340740135265 0 360.2031738162041 PEAK CID FTMS 0 0 0 9522 171641.75 0.195290127226995 2 -0.1713409423828125 20 Unmodified _SLPCPRRHL_ REV__ENST00000344651.4_1_12:121160374-121160593:+|nuORF 21.74664581756881 0.185237546287679 4 D 1 -1 9.732 0.0 0.0 1.3547 0.0 0.0 518.2757742980194 82.06693445377186 600.3427087517913 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 D 1.3547 - 9 + 1 1.774 117083.2 1.0 4937 4603 9522 HBL1_DMSO_200M_050219_2,9542 HBL1_DMSO_200M_050219_2,9542,SLPCPRRHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9544 51.986 9.2 4338700.0 25 0 728840.0 + 37059 TGFSPRQI 8 59 453.2455627525363 904.4765725718726 2 453.2458373904228 MULTI CID FTMS 0 0 0 9543 5492928.0 0.1412734311730894 3 -0.2824287414550781 1 Unmodified _TGFSPRQI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 36.12702656103203 0.299085846329477 4 TG{M(Oxidation (M))|F}SP 5 3 62.435 0.0 0.0 6.9029 0.0 0.0 0.0 412.2314547174438 412.2314547174438 37.37334396171555 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 + TG{M(Oxidation (M))|F}SP 6.9029 + + 51 + 1 1.772 37330.1 1.0 4938 4604 9543 HBL1_DMSO_200M_050219_2,9544 HBL1_DMSO_200M_050219_2,9544,TGFSPRQI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9545 51.987 18.0 3244800.0 25 0 732830.0 + 15066 IMHIQSNFL 9 87 368.19447723393614 1101.5616023020084 3 368.1942626833916 MULTI CID FTMS 0 0 0 9543 3003769.0 0.3114664447383994 -17 1.5031661987304688 2 Unmodified _IMHIQSNFL_ REV__ENSG00000157578|ENST00000288350|LCA5L 12.531546534597751 0.4974689918368763 4 [KG]PWEEP{M(Oxidation (M))|F}{I|L} 9 -1 [KG]PWEEP{M(Oxidation (M))|F} + + 13.979 6.5204 0.67188 1.2691 1.2691 44.279 0.0 0.0 0.0 0.0 -7.447274948966935 -7.447274948966935 0.0 0 0.0 0.0 0.0 0.0 [KG]PWEEP{M(Oxidation (M))|F}{I|L} 1.2691 - 128 + 1 1.772 54523.9 1.0 4939 4604 9543 HBL1_DMSO_200M_050219_2,9545 HBL1_DMSO_200M_050219_2,9545,IMHIQSNFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9546 51.988 12.0 4846400.0 25 0 708730.0 + 44907 YPPPEVRNI 9 53 542.7934218667502 1083.5722908003004 2 542.7929565310478 MULTI CID FTMS 0 0 0 9543 4257357.5 0.2298347347918002 -8 0.8261146545410156 3 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 15.738622578938676 0.4106572216562794 4 YPPPE 5 4 62.206 0.0 0.0 5.7408 0.0 0.0 0.0 497.2848909967407 497.2848909967407 55.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YPPPE 5.7408 + + 22 + 1 1.772 51118.4 1.0 4940 4604 9543 HBL1_DMSO_200M_050219_2,9546 HBL1_DMSO_200M_050219_2,9546,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9547 51.99 30.0 1622300.0 25 0 144140.0 + 9947 FPGKHFQEI 9 102 551.7875691100098 1101.5605852868196 2 551.7877685427666 MULTI CID FTMS 0 0 0 9543 1576357.5 0.3365932699602478 -17 1.5031661987304688 4 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 37.07464296494664 0.0915153923251136 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E 9 3 + 58.615 0.0 0.0 5.3211 5.3211 82.828 0.0 0.0 0.0 18.15938719897659 44.94273099358573 18.15938719897659 9.208187539523747 0 1.0994850021680094 1.6989700043360187 0.8807196863200843 0.805462187404089 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[YK]PE;{[QD]|[EN]|[WG]|[KD]|[RS]}[HN]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}E;{[QN]|[E{I|L}]|[KN]}Q[VP]C(Carbamidomethyl (C))[KT]Q 5.3211;4.4852;2.9132;1.6287;1.372 -;-;-;-;- 397 1 1.772 43125.8 1.0 4941 4604 9543 HBL1_DMSO_200M_050219_2,9547 HBL1_DMSO_200M_050219_2,9547,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9548 51.991 42.0 976910.0 25 0 85987.0 + 38137 TPMNPANTI 9 77 479.7365594847557 957.4585660363114 2 479.7368347048759 MULTI CID FTMS 0 0 0 9543 1341621.125 0.9355456601294792 -1 0.0848731994628906 5 Unmodified _TPMNPANTI_ ENSG00000118985|ENST00000237853|ELL2 32.78568957990786 0.1150597335874693 4 [TP][MN]PAN{I|L}T 9 2 + 50.869 0.0 0.0 5.3129 5.3129 79.476 0.0 0.0 0.0 6.478174818886373 16.478174818886373 6.478174818886373 6.478174818886373 0 0.5 1.5228787452803376 0.0 0.3807196863200844 [TP][MN]PAN{I|L}T;[MN]PTPAN{I|L}T;[EP][WQ]AN{I|L}T;[TP][MN]PAGG{I|L}T;[EP]{[{M(Oxidation (M))|F}H]|[RQ]}TN{I|L}T;[MN]PTPAGG{I|L}T;[EP][WQ]AGG{I|L}T;[EP]{[{M(Oxidation (M))|F}H]|[RQ]}TGG{I|L}T;[DG][RD]PAN{I|L}T;[MN]P[PA]TN{I|L}T 5.3129;4.6363;4.5058;4.3512;4.0075;3.6746;3.5384;3.0401;2.9923;2.494 -;-;-;-;-;-;-;-;-;- 172 1 1.772 41775.7 1.0 4942 4604 9543 HBL1_DMSO_200M_050219_2,9548 HBL1_DMSO_200M_050219_2,9548,TPMNPANTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9549 51.992 46.0 1082300.0 25 0 156940.0 + 22034 LPPPPPPAM 9 79 458.751710776598 915.488868619996 2 458.7518798708916 MULTI CID FTMS 0 0 0 9543 894334.1875 0.2022064342960475 24 -1.874183654785156 6 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 45.7499826716795 0.0496882803020414 4 [YK]{I|L}PP[PA]M 8 4 [YK]{I|L} + + 30.942 3.4679 0.85787 3.3798 3.3798 46.887 0.0 0.0 0.0 0.0 20.56352140095644 0.0 0.0 0 1.5 0.0 0.0 0.0 [YK]{I|L}PP[PA]M 3.3798 - 168 + 1 1.772 42301.2 1.0 4943 4604 9543 HBL1_DMSO_200M_050219_2,9549 HBL1_DMSO_200M_050219_2,9549,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9550 51.995 173.0 425480.0 25 0 29121.0 + -1 YQTRMQKQG 9 95 578.2815174456143 1154.5484819580286 2 578.2812988162041 MULTI CID FTMS 0 0 0 9543 522967.0625 0.5704261627221294 -4 0.4376869201660156 7 Oxidation (M) _YQTRM(Oxidation (M))QKQG_ REV__ENST00000471049.5_1_10:99197505-99205308:-|nuORF 7.910154910731844 0.6385446671287552 4 {[VA]|[{I|L}G]}[PA]WPP 7 -1 28.204 0.0 0.0 2.4429 0.0 0.0 0.0 433.1487238750306 433.1487238750306 17.746907182741367 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}[PA]WPP 2.4429 - 229 1 1.772 61650.3 1.0 4944 4604 9543 HBL1_DMSO_200M_050219_2,9550 HBL1_DMSO_200M_050219_2,9550,YQTRMQKQG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9551 51.999 169.0 651390.0 25 0 84880.0 + 28026 PNHFVKTIL 9 116 356.87822185588766 1067.612836167863 3 356.8782836794853 MULTI CID FTMS 0 0 0 9543 218106.609375 0.4916559028620167 -2 0.203826904296875 8 Unmodified _PNHFVKTIL_ ENSG00000100479|ENST00000216367|POLE2;ENST00000554377.1_1_14:50116973-50120958:-|nuORF;ENST00000554851.5_1_14:50110352-50118040:-|nuORF;nc|ENSG00000100479|P56282-2|POLE2;nc|ENSG00000100479|P56282-3|POLE2 37.97399986684836 0.0865783450051559 4 [NP]H{M(Oxidation (M))|F}VKT 7 2 27.981 0.0 0.0 2.6209 0.0 0.0 0.0 241.15722134492844 241.15722134492844 11.782891498745588 0.0 0.0 0.0 0 0.0 1.0 0.0 0.7302046884880937 + [NP]H{M(Oxidation (M))|F}VKT 2.6209 + + 110 1 1.772 97545.8 1.0 4945 4604 9543 HBL1_DMSO_200M_050219_2,9551 HBL1_DMSO_200M_050219_2,9551,PNHFVKTIL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9552 52.004 274.0 318400.0 25 0 53667.0 + 14398 IFIAGSKQY 9 107 513.7844010331874 1025.5542491331746 2 513.7847778201103 MULTI CID FTMS 0 0 0 9543 177666.171875 1.0 0 0.0 9 Unmodified _IFIAGSKQY_ ENSG00000006062|ENST00000344686|MAP3K14 36.12702656103203 0.0967173616627612 4 [{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]}QA{I|L}{[QN]|[E{I|L}]|[KN]} 9 7 + 40.837 0.0 0.0 3.9819 3.9819 70.117 0.0 0.0 0.0 3.2340029633583995 7.147642715192504 3.2340029633583995 3.2340029633583995 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]}QA{I|L}{[QN]|[E{I|L}]|[KN]};[RP]EAQA{I|L}{[QN]|[E{I|L}]|[KN]};[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]A{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AQAGHG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AQAGHAV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AQQHG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AQQHAV;[KS]Q[HT]A{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}A[SG]KQY;[RP]EA[AG]A{I|L}{[QN]|[E{I|L}]|[KN]} 3.9819;3.6666;3.084;2.9183;2.9183;2.8684;2.8684;2.8682;2.8433;2.7687 -;-;-;-;-;-;-;-;+;- + 568 1 1.772 73705.8 1.0 4946 4604 9543 HBL1_DMSO_200M_050219_2,9552 HBL1_DMSO_200M_050219_2,9552,IFIAGSKQY True True IFIAGSKQY 52.003733 513.78477782011 3074158.75 9543.0 ENSG00000006062|ENST00000344686|MAP3K14 3.911358674367269 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9553 52.018 800.0 207290.0 25 0 18371.0 37196 TIGAVSEL 8 207 395.2211862838869 788.4278196345738 2 395.2216674685478 MULTI CID FTMS 0 0 0 9543 143150.515625 0.5138469406149293 -2 0.203826904296875 10 Unmodified _TIGAVSEL_ ENSG00000204970|ENST00000504120|PCDHA1;nc|ENSG00000204970|Q9Y5I3-3|PCDHA1 26.34127834903884 0.4900704351052977 4 {[QN]|[E{I|L}]|[KN]}[KS]AE{I|L} 7 5 + 35.414 0.0 0.0 4.4918 4.4918 69.702 0.0 0.0 0.0 8.118263698587196 9.960310232820149 8.118263698587196 2.04119982655925 0 0.3182503180159344 1.0969100130080565 0.8006831147923209 0.0 {[QN]|[E{I|L}]|[KN]}[KS]AE{I|L};{[QN]|[E{I|L}]|[KN]}AKSE{I|L};[{I|L}T]A[TA]AE{I|L};[{I|L}T]A[VG]SE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}T]AE{I|L};{[CP]|[EA]}{I|L}KSE{I|L};[TA]A[{I|L}T]AE{I|L};[TA]{I|L}[TA]AE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VVSE{I|L} 4.4918;4.2329;3.4621;2.1938;2.1259;1.8493;1.1627;1.1202;0.8576 -;-;-;-;-;-;-;-;- 220 1 1.772 127551.1 0.550000011920929 4947 4604 9543 HBL1_DMSO_200M_050219_2,9553 HBL1_DMSO_200M_050219_2,9553,TIGAVSEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9554 52.027 512.0 302160.0 25 0 28147.0 + 4285 DAREAGFQV 9 150 496.7437231812852 991.4728934293704 2 496.7427245974541 MULTI CID FTMS 0 0 0 9543 132982.625 0.022132283970671 -4 0.4376869201660156 11 Unmodified _DAREAGFQV_ chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-13|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-6|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 40.23920728925047 0.0741434193262949 4 {NN|[MP]|[D{I|L}]|[EV]}QWG{M(Oxidation (M))|F}QV 8 4 + 57.559 0.0 0.0 5.8054 5.8054 79.22 0.0 0.0 0.0 4.39277553384521 16.40978057358332 4.39277553384521 4.39277553384521 0 1.329689690656103 0.6777807052660807 0.5356668758921829 0.2742275032520141 {NN|[MP]|[D{I|L}]|[EV]}QWG{M(Oxidation (M))|F}QV;{[DA]|[EG]}REAG{M(Oxidation (M))|F}QV;[AG]VEWG{M(Oxidation (M))|F}QV;{[DA]|[EG]}REQ{M(Oxidation (M))|F}QV;[AG]VTRD{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[HS]{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}QWG{M(Oxidation (M))|F}[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}EWG{M(Oxidation (M))|F}QV;{[DA]|[EG]}REAG{M(Oxidation (M))|F}[AG]V;{[VA]|[{I|L}G]}GEWG{M(Oxidation (M))|F}QV 5.8054;5.3624;5.1022;5.0126;5.0063;4.9775;4.8712;4.4342;4.4336;4.2937 -;+;-;-;-;-;-;-;-;- + 977 1 1.772 120247.8 1.0 4948 4604 9543 HBL1_DMSO_200M_050219_2,9554 HBL1_DMSO_200M_050219_2,9554,DAREAGFQV True True DAREAGFQV 52.026565 496.742724597454 121137972.0 9543.0 nc|ENSG00000132185|Q7L513-3|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;nc|ENSG00000132185|Q7L513-6|FCRLA;;nc|ENSG00000132185|Q7L513-13|FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-8|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA 6.356374581654866 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9555 52.04 800.0 138160.0 25 0 8533.1 + 2170 AQAEVYKEL 9 159 525.7770040325356 1049.5394551318711 2 525.7784911990166 MULTI CID FTMS 0 0 0 9543 118945.5 0.0255265136512997 4 -0.3279037475585937 12 Unmodified _AQAEVYKEL_ ENSG00000169710|ENST00000306749|FASN 43.9818466556824 0.0535980856389242 4 [QA]AEVY 6 3 46.222 0.0 0.0 4.404 0.0 0.0 0.0 385.209994860817 385.209994860817 21.326605886058903 0.0 0.0 0.0 0 1.2614393726401687 0.7958800173440752 0.3252574989159953 0.0 + [QA]AEVY 4.404 + + 1050 + 1 1.772 90929.0 0.6899999976158142 4949 4604 9543 HBL1_DMSO_200M_050219_2,9555 HBL1_DMSO_200M_050219_2,9555,AQAEVYKEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9556 52.054 800.0 257180.0 25 0 22753.0 + 34660 FQYSKSPSL 9 203 527.7820703978819 1053.5495878625636 2 528.2830688357353 MULTI CID FTMS 0 0 0 9543 121241.8984375 0.0731261849872314 12 -0.8679733276367188 13 Unmodified _SPPPSLSLAW_ nc|ENSG00000258890|Q96GE4-2|CEP95;ENST00000553956.6_1_17:62527116-62533894:+|nuORF;ENSG00000258890|ENST00000556440|CEP95 14.838274106304384 0.5985701837916485 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[KQ]PT{I|L} 8 9 30.741 0.0 0.0 2.9178 0.0 0.0 0.0 143.01392380562018 143.01392380562018 16.028601371006204 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.4247425010840047 0.0629529932484498 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[KQ]PT{I|L} 2.9178 - 1797 1 1.772 155793.8 0.6700000166893005 4950 4604 9543 HBL1_DMSO_200M_050219_2,9556 HBL1_DMSO_200M_050219_2,9556,SPPPSLSLAW False False FQYSKSPSL 52.054225 528.283068835735 763749.875 9543.0 nc|ENSG00000258890|Q96GE4-2|CEP95;;ENST00000553956.6_1_17:62527116-62533894:+|nuORF;;ENSG00000258890|ENST00000556440|CEP95 0.5815444886684418 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9557 52.068 800.0 170180.0 25 0 9984.3 + -1 SWHKMWREWWM 11 112 852.8846827496264 1703.7548125660528 2 852.8824340701103 MULTI CID FTMS 0 0 0 9543 108833.453125 0.8917632888309972 -1 0.0848731994628906 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SWHKMWREWWM_ REV__ENST00000301180.9_1_12:51133363-51135252:+|nuORF 2.498486711656943 0.8633599123570009 4 T[NP]{[YC]|[HE]}QNA{M(Oxidation (M))|F}YQ 11 -1 64.385 0.0 0.0 3.779 0.0 0.0 356.2062855451188 0.0 356.2062855451188 0.0 43.85592936331011 0.0 0.0 0 1.1237125054200234 0.0 0.7614393726401688 1.9291746928241125 T[NP]{[YC]|[HE]}QNA{M(Oxidation (M))|F}YQ 3.779 - 3403 1 1.772 93958.8 0.5699999928474426 4951 4604 9543 HBL1_DMSO_200M_050219_2,9557 HBL1_DMSO_200M_050219_2,9557,SWHKMWREWWM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9559 52.072 3.3 21269000.0 25 0 4845100.0 + 15405 IPPDQQRLI 9 63 540.3146414642733 1078.6147299953466 2 540.3148071169853 MULTI CID FTMS 0 0 0 9558 17505772.0 0.7078580218713428 -4 0.4265327453613281 1 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 22.736283301280096 0.2418982879461534 4 {I|L}PPDQ 5 4 66.013 0.0 0.0 6.1202 0.0 0.0 0.0 525.3165377252561 525.3165377252561 59.02372200412145 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + {I|L}PPDQ 6.1202 + + 20 + 1 1.772 65677.0 1.0 4952 4605 9558 HBL1_DMSO_200M_050219_2,9559 HBL1_DMSO_200M_050219_2,9559,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9560 52.074 40.0 1404200.0 25 0 136590.0 + 41601 VPPLATNTV 9 85 456.2635930417542 910.5126331503084 2 456.2635986208916 MULTI CID FTMS 0 0 0 9558 1733434.0 0.2652520981688951 -6 0.6390457153320312 2 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 48.345845343767074 0.0439967357579942 4 [VP]P{I|L}ATNTV 9 0 + 65.103 0.0 0.0 7.1502 7.1502 85.139 0.0 0.0 0.0 7.83886970509073 16.478174818886373 7.83886970509073 5.228787452803374 0 0.7742275032520141 2.0 0.5 0.0 + + [VP]P{I|L}ATNTV;[VP]PA{I|L}TNTV;[VP][VS]PVNTV;[{I|L}P]APTVNTV;[{I|L}P]APVTNTV;[VP][VS]PNVTV;[VP]P{I|L}ATGGTV;[{I|L}P]PATVNTV;[{I|L}P]APTNVTV;[{I|L}P]PAVTNTV 7.1502;6.5759;6.4071;6.2893;6.2627;6.1886;6.1389;6.0959;6.0707;6.0693 +;-;-;-;-;-;-;-;-;- + 848 1 1.772 47680.2 1.0 4953 4605 9558 HBL1_DMSO_200M_050219_2,9560 HBL1_DMSO_200M_050219_2,9560,VPPLATNTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9561 52.075 46.0 1571500.0 25 0 243100.0 + 22372 LPSQVSRVV 9 69 492.7956109218912 983.5766689105824 2 492.7956115603447 MULTI CID FTMS 0 0 0 9558 1017836.375 0.5057941813510217 -3 0.2902946472167969 3 Unmodified _LPSQVSRVV_ ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2 26.268140514670165 0.1969607489560049 4 {I|L}PSQV 5 4 60.322 0.0 0.0 6.133 0.0 0.0 0.0 456.25848423594135 456.25848423594135 31.849760524580745 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.4247425010840047 + {I|L}PSQV 6.133 + + 128 + 1 1.772 59457.2 1.0 4954 4605 9558 HBL1_DMSO_200M_050219_2,9561 HBL1_DMSO_200M_050219_2,9561,LPSQVSRVV False True LPSQVSRVV 52.074914 492.795611560345 63029562.0 9558.0 ENSG00000184432|ENST00000333188|COPB2;;nc|ENSG00000184432|P35606-2|COPB2 3.759835879007975 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9562 52.077 91.0 941640.0 25 0 63844.0 + 3622 DADPVHRII 9 100 345.85857568608765 1034.553897658463 3 345.8578063845634 MULTI CID FTMS 0 0 0 9558 594104.5 0.3339587165565131 -2 0.1713409423828125 4 Unmodified _DADPVHRII_ ENST00000313064.2_1_2:232378824-232378857:-|nuORF 30.63653989081413 0.1413794767160703 4 {[DA]|[EG]}DPVHR{I|L}{I|L} 9 0 + 61.744 0.0 0.0 5.9681 5.9681 90.17 0.0 0.0 0.0 40.77455389734872 4.683065105678033 4.683065105678033 32.54309664956708 0 0.3494850021680094 2.0 0.0 0.3054621874040891 + + {[DA]|[EG]}DPVHR{I|L}{I|L};WD{I|L}[YG]R{I|L}{I|L};W{I|L}D[YG]R{I|L}{I|L};{[DA]|[EG]}{[DS]|[MA]|[CV]|TT}[{M(Oxidation (M))|F}V]R{I|L}{I|L};WD{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L}{I|L};WDPV[H{I|L}][VG]{I|L};{[DA]|[EG]}[{M(Oxidation (M))|F}V]{[DS]|[MA]|[CV]|TT}R{I|L}{I|L};W{I|L}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L}{I|L};W{I|L}[{M(Oxidation (M))|F}V]RDS{I|L};W[{M(Oxidation (M))|F}V]{I|L}RDS{I|L} 5.9681;2.8225;2.5316;2.1688;2.1537;2.0685;2.048;1.8628;1.1475;0.85653 +;-;-;-;-;-;-;-;-;- + 126 + 1 1.772 75874.1 1.0 4955 4605 9558 HBL1_DMSO_200M_050219_2,9562 HBL1_DMSO_200M_050219_2,9562,DADPVHRII False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9563 52.081 193.0 768080.0 25 0 87420.0 + 4578 DAYSFSRKI 9 132 362.8575430016125 1085.5507996050374 3 362.8568908572197 MULTI CID FTMS 0 0 0 9558 369887.46875 0.03443055332025 -4 0.4265327453613281 5 Unmodified _DAYSFSRKI_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000538600.1_1_12:6631091-6632090:+|nuORF 39.94969957227396 0.0757326808254658 4 {[DA]|[EG]}YS{M(Oxidation (M))|F}S[RK]{I|L} 9 0 + 61.131 0.0 0.0 5.6313 5.6313 89.11 0.0 0.0 0.0 42.859588877565535 10.17003889607846 10.17003889607846 40.08478465655138 0 0.3252574989159953 1.6989700043360187 0.3807196863200844 1.0994850021680094 + + {[DA]|[EG]}YS{M(Oxidation (M))|F}S[RK]{I|L};{[DA]|[EG]}{I|L}[HM]C[RK]{I|L};{[DA]|[EG]}{I|L}[HM][RK]C{I|L} 5.6313;1.9387;1.4992 +;-;- + 276 + 1 1.772 122595.1 1.0 4956 4605 9558 HBL1_DMSO_200M_050219_2,9563 HBL1_DMSO_200M_050219_2,9563,DAYSFSRKI True True DAYSFSRKI 52.080614 362.85689085722 2014009096.0 9558.0 ENST00000538600.1_1_12:6631091-6632090:+|nuORF;;ENSG00000010292|ENST00000315579|NCAPD2 6.946518103281657 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9564 52.084 187.0 514390.0 25 0 46927.0 + 45591 YVFVRKPTHV 10 97 415.9084068990424 1244.703391297327 3 415.9082519412041 MULTI CID FTMS 0 0 0 9558 356487.9375 0.7614257271417876 1 -0.1021194458007812 6 Unmodified _YVFVRKPTHV_ REV__ENST00000325089.7_1_13:88324908-88325049:+|nuORF 8.444304893310646 0.6875766406947869 4 YP{[WN]|[YH]}KV 6 -1 20.635 0.0 0.0 1.6578 0.0 0.0 439.2804923518266 0.0 439.2804923518266 0.0 -0.0552339309072067 -0.0552339309072067 0.0 0 0.5 0.0 0.0 0.3494850021680094 YP{[WN]|[YH]}KV 1.6578 - 212 + 1 1.772 79229.4 1.0 4957 4605 9558 HBL1_DMSO_200M_050219_2,9564 HBL1_DMSO_200M_050219_2,9564,YVFVRKPTHV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9565 52.087 115.0 706640.0 25 0 127350.0 + 9096 FFIETGRPK 9 95 365.5382265667584 1093.5928503004752 3 365.5380737185478 MULTI CID FTMS 0 0 0 9558 329330.78125 0.5001673934780425 1 -0.1021194458007812 7 Unmodified _FFIETGRPK_ ENST00000412272.6_1_10:69832876-69833427:-|nuORF 18.373094154950223 0.3393451798331396 4 ET 2 7 13.711 0.0 0.0 1.2538 0.0 0.0 407.22023775750057 453.2574048801384 860.477642637639 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 + ET 1.2538 + + 81 + 1 1.772 71472.3 1.0 4958 4605 9558 HBL1_DMSO_200M_050219_2,9565 HBL1_DMSO_200M_050219_2,9565,FFIETGRPK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9566 52.089 120.0 1041900.0 25 0 131660.0 + 39480 VARLEKIKI 9 126 357.24120444335136 1068.701783930254 3 357.2408935427666 MULTI CID FTMS 0 0 0 9558 325374.78125 0.5089664581493103 -1 0.0864677429199218 8 Unmodified _VARLEKIKI_ ENSG00000244045|ENST00000292114|TMEM199;ENST00000483505.6_1_17:26684735-26687632:+|nuORF;ENST00000581386.5_1_17:26684693-26686548:+|nuORF 29.43715596616401 0.1566398223704148 4 K{I|L}KV{I|L} 5 6 29.706 0.0 0.0 2.7797 0.0 0.0 469.2650929181656 0.0 469.2650929181656 0.0 1.4253615730132907 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 K{I|L}KV{I|L} 2.7797 - 307 1 1.772 114475.9 1.0 4959 4605 9558 HBL1_DMSO_200M_050219_2,9566 HBL1_DMSO_200M_050219_2,9566,VARLEKIKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9567 52.103 800.0 170240.0 25 0 18553.0 + 4697 DDDDKEEYYFY 11 102 751.2873750229444 0 751.2880737185478 PEAK CID FTMS 0 0 0 9558 190455.78125 1.0 0 0.0 9 Unmodified _DDDDKEEYYFY_ REV__ENSG00000168216|ENST00000649934|LMBRD1;REV__nc|ENSG00000168216|Q9NUN5-2|LMBRD1;REV__nc|ENSG00000168216|Q9NUN5-3|LMBRD1 12.240655878213236 0.4295705806160874 4 {M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]QAED 7 -1 43.9 0.0 0.0 2.9256 0.0 0.0 209.0681439987987 375.1421507697664 584.2102947685651 0.0 0.0 0.0 0.0 0 1.805462187404089 0.0 0.0 0.3494850021680094 {M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]QAED 2.9256 - 691 + 1 1.772 98971.1 0.7699999809265137 4960 4605 9558 HBL1_DMSO_200M_050219_2,9567 HBL1_DMSO_200M_050219_2,9567,DDDDKEEYYFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9568 52.117 800.0 79131.0 25 0 15820.0 -1 0 48 1104.4594797661937 3310.3566098987803 3 1104.801806628704 MULTI CID FTMS 0 0 0 9558 163654.890625 0.6400382119552358 1 -0.1021194458007812 10 4 E 1 -1 6.9897 0.0 0.0 0.21115 0.0 0.0 2654.130029155982 524.1629122369749 3178.292941392957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21115 - 24 + 1 1.772 59722.1 0.5600000023841858 4961 4605 9558 HBL1_DMSO_200M_050219_2,9568 HBL1_DMSO_200M_050219_2,9568, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9569 52.12 149.0 337890.0 25 0 27683.0 43173 VYSLLFVS 8 94 464.26273553337296 926.510918133546 2 464.2628661990166 MULTI CID FTMS 0 0 0 9558 153102.65625 0.9979147666600978 -1 0.0864677429199218 11 Unmodified _VYSLLFVS_ ENST00000287169.7_1_11:57440214-57440280:+|nuORF 19.438996006549623 0.6237395211498085 4 [VP]EQAVVSV 9 6 [VP]EQAVV + + 18.201 24.525 3.3949 1.9645 1.9645 44.564 0.0 0.0 0.0 0.0 5.013487579716765 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 [VP]EQAVVSV 1.9645 - 111 + 1 1.772 44838.3 1.0 4962 4605 9558 HBL1_DMSO_200M_050219_2,9569 HBL1_DMSO_200M_050219_2,9569,VYSLLFVS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9570 52.134 800.0 247440.0 25 0 25792.0 + 6075 DSPGSLKI 8 163 408.72743859457375 815.4403242559475 2 408.7270080447197 MULTI CID FTMS 0 0 0 9558 116548.203125 0.3031061873837256 -2 0.1713409423828125 12 Unmodified _DSPGSLKI_ ENSG00000148841|ENST00000337478|ITPRIP 32.30548876998284 0.3644845974844379 4 {[DS]|[MA]|[CV]|TT}PG{[TV]|[{I|L}S]}K{I|L} 8 0 + 34.947 0.0 0.0 4.2857 4.2857 81.487 0.0 0.0 0.0 14.598251096340425 13.399480616943508 13.399480616943508 14.55274201424264 0 0.4247425010840047 0.0 0.3252574989159953 0.5843105420796064 + + {[DS]|[MA]|[CV]|TT}PG{[TV]|[{I|L}S]}K{I|L};{[DS]|[MA]|[CV]|TT}PG[K{I|L}]S{I|L};{[DS]|[MA]|[CV]|TT}PG[K{I|L}]TV 4.2857;2.501;1.6439 +;-;- + 142 + 1 1.772 159553.5 0.5299999713897705 4963 4605 9558 HBL1_DMSO_200M_050219_2,9570 HBL1_DMSO_200M_050219_2,9570,DSPGSLKI False True DSPGSLKI 52.133593 408.72700804472 4545536.5 9558.0 ENSG00000148841|ENST00000337478|ITPRIP 3.903964519500733 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9571 52.147 800.0 327060.0 25 0 33204.0 + 33329 SFYDGYRHEM 10 185 435.5166388628917 1303.5280871888751 3 435.5169555544853 MULTI CID FTMS 0 0 0 9558 115106.4296875 0.3902093507930398 -2 0.1713409423828125 13 Unmodified _SFYDGYRHEM_ ENSG00000142657|ENST00000270776|PGD;ENST00000496718.1_1_1:10478943-10479617:+|nuORF;nc|ENSG00000142657|P52209-2|PGD 43.476825903602695 0.120852566744744 4 S{M(Oxidation (M))|F}YDHYRGEM 10 2 + 61.927 0.0 0.0 4.7508 4.7508 70.053 0.0 0.0 0.0 9.719712763997563 8.846065812979305 8.846065812979305 1.7609125905568137 0 0.25 0.0 0.8494850021680094 0.5629529932484498 S{M(Oxidation (M))|F}YDHYRGEM;S{M(Oxidation (M))|F}YDYGRHEM;S{M(Oxidation (M))|F}YDYHRGEM;S{M(Oxidation (M))|F}YDGYRHEM;S{M(Oxidation (M))|F}YDHYRGME;S{M(Oxidation (M))|F}YDM{M(Oxidation (M))|F}H{[QV]|[N{I|L}]|[RA]|[KV]}M;S{M(Oxidation (M))|F}YDYGRHME;S{M(Oxidation (M))|F}YDYHRGME;S{M(Oxidation (M))|F}YDM{M(Oxidation (M))|F}H[MN]{I|L};S{M(Oxidation (M))|F}YDGYRHME 4.7508;4.6157;4.5942;4.5413;4.0721;4.0061;3.937;3.9155;3.8835;3.8627 -;-;-;+;-;-;-;-;-;- + 3767 + 1 1.772 205462.7 0.550000011920929 4964 4605 9558 HBL1_DMSO_200M_050219_2,9571 HBL1_DMSO_200M_050219_2,9571,SFYDGYRHEM True True SFYDGYRHEM 52.147408 435.516955554485 2055156.5 9558.0 ENSG00000142657|ENST00000270776|PGD;;nc|ENSG00000142657|P52209-2|PGD;;ENST00000496718.1_1_1:10478943-10479617:+|nuORF 7.720542430877685 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9572 52.157 431.0 240940.0 25 0 38249.0 + 44894 YPPPAPGI 8 129 406.2212944505399 810.4280359678799 2 406.2213622927666 MULTI CID FTMS 0 0 0 9558 98175.4296875 0.3544442472560476 -9 0.9125823974609376 14 Unmodified _YPPPAPGI_ ENSG00000205352|ENST00000429243|PRR13;nc|ENSG00000205352|Q9NZ81-2|PRR13 32.45364647766026 0.3613649037604678 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KQ]Y{I|L} 6 5 + 15.564 0.0 0.0 1.9204 1.9204 72.159 0.0 0.0 0.0 0.3862778287721369 3.3990283210799515 0.3862778287721369 8.85361220031512 0 0.242992819099939 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KQ]Y{I|L};{[HG]|PP}APGPY{I|L} 1.9204;0.82795 -;- 122 1 1.772 83631.5 1.0 4965 4605 9558 HBL1_DMSO_200M_050219_2,9572 HBL1_DMSO_200M_050219_2,9572,YPPPAPGI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9573 52.17 800.0 207710.0 25 0 57007.0 -1 0 114 650.3287377746562 1947.9643839241685 3 650.6640502810478 MULTI CID FTMS 0 0 0 9558 94441.8984375 1.0 0 0.0 15 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S 3 -1 16.567 0.0 0.0 0.85047 0.0 0.0 0.0 1597.792270236922 1597.792270236922 1.3635888256505204 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S 0.85047 - 193 1 1.772 128635.7 0.5199999809265137 4966 4605 9558 HBL1_DMSO_200M_050219_2,9573 HBL1_DMSO_200M_050219_2,9573, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9575 52.175 7.4 9125500.0 25 0 611390.0 + 39473 VAQLLKRL 8 91 314.21522759496986 939.6238533851096 3 314.2149230837822 MULTI CID FTMS 0 0 0 9574 7285995.0 0.9877108808574628 1 -0.093841552734375 1 Unmodified _VAQLLKRL_ REV__ENST00000429770.5_2_3:50402382-50403264:-|nuORF;REV__ENST00000483620.1_1_3:50402099-50403170:-|nuORF 8.593279151180031 0.7721714526254883 4 K{I|L}K[R{I|L}]{I|L} 6 -1 25.679 0.0 0.0 2.7329 0.0 0.0 170.0688423804175 0.0 170.0688423804175 0.0 18.68948444925195 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.4247425010840047 K{I|L}K[R{I|L}]{I|L} 2.7329 - 46 + 1 1.764 58381.5 1.0 4967 4606 9574 HBL1_DMSO_200M_050219_2,9575 HBL1_DMSO_200M_050219_2,9575,VAQLLKRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9576 52.176 7.8 7987400.0 25 0 1418400.0 + 13043 HAVGDIPGV 9 62 432.7324462929546 863.4503396527092 2 432.7325622439384 MULTI CID FTMS 0 0 0 9574 9080113.0 0.6294008033355609 -1 0.1021194458007812 2 Unmodified _HAVGDIPGV_ ENSG00000186468|ENST00000296674|RPS23;ENST00000429775.2_1_X:70182861-70183140:+|nuORF 49.66892048692302 0.0410958345688192 4 [HA]VGD{I|L} 6 3 43.862 0.0 0.0 5.0798 0.0 0.0 0.0 268.1288808437424 268.1288808437424 31.64320017660792 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.4247425010840047 0.0 + [HA]VGD{I|L} 5.0798 + + 96 1 1.764 52017.2 1.0 4968 4606 9574 HBL1_DMSO_200M_050219_2,9576 HBL1_DMSO_200M_050219_2,9576,HAVGDIPGV True True HAVGDIPGV 52.175789 432.732562243938 425428368.0 9574.0 ENSG00000186468|ENST00000296674|RPS23;;ENST00000429775.2_1_X:70182861-70183140:+|nuORF 9.049686749776203 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9577 52.177 1.2 49575000.0 25 0 7543400.0 + 4580 DAYSFSRKI 9 72 543.7830507900837 1085.5515486469674 2 543.7839843630791 MULTI CID FTMS 0 0 0 9574 46297548.0 0.3142383322761334 -2 0.1885871887207031 3 Unmodified _DAYSFSRKI_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000538600.1_1_12:6631091-6632090:+|nuORF 31.26834338654808 0.1333407332142048 4 {[DA]|[EG]}YS{M(Oxidation (M))|F}S 6 3 60.138 0.0 0.0 5.5399 0.0 0.0 0.0 412.2676485651001 412.2676485651001 31.2101498947667 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.8494850021680094 0.0 + {[DA]|[EG]}YS{M(Oxidation (M))|F}S 5.5399 + + 87 + 1 1.764 50386.6 1.0 4969 4606 9574 HBL1_DMSO_200M_050219_2,9577 HBL1_DMSO_200M_050219_2,9577,DAYSFSRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9578 52.178 11.0 5722000.0 25 0 881150.0 + 35466 STLPKSLSL 9 78 473.28450311658895 944.554453299978 2 473.2845947146416 MULTI CID FTMS 0 0 0 9574 5730149.5 0.4327902901009017 -4 0.3924140930175781 4 Unmodified _STLPKSLSL_ chr20:43713106-43715163|43|124.74|0.37|8.4|+|0|MYBL2,None|1;chr20:43713106-43715221|22|13.86|0.02|9.29|+|0|MYBL2,None|1;ENSG00000101057|ENST00000217026|MYBL2;nc|ENSG00000101057|P10244-2|MYBL2 45.69961567697781 0.0497987121815769 4 {[MG]|[TS]}{I|L}PTVT{[QV]|[N{I|L}]|[RA]|[KV]} 9 4 + 47.145 0.0 0.0 4.9913 4.9913 86.516 0.0 0.0 0.0 30.23963020834951 0.7133375178436552 0.7133375178436552 47.14509699961575 0 1.305462187404089 0.0 0.4247425010840047 0.0 {[MG]|[TS]}{I|L}PTVT{[QV]|[N{I|L}]|[RA]|[KV]} 4.9913 - 114 + 1 1.764 53029.3 1.0 4970 4606 9574 HBL1_DMSO_200M_050219_2,9578 HBL1_DMSO_200M_050219_2,9578,STLPKSLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9579 52.179 18.0 2826100.0 25 0 272120.0 -1 SQRAFCTMHFY 11 63 732.3127787141924 1462.6110044951847 2 732.3135864138603 MULTI CID FTMS 0 0 0 9574 2822131.25 1.0 0 0.0 5 Carbamidomethyl (C),Oxidation (M) _SQRAFC(Carbamidomethyl (C))TM(Oxidation (M))HFY_ ENST00000277415.15_1_9:137989658-137989826:+|nuORF 5.731851221503515 0.8481046878870278 4 [AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 66.925 0.0 0.0 4.5757 4.5757 67.737 0.0 0.0 0.0 0.8895039916081231 1.7166838313960395 0.8895039916081231 0.8895039916081231 0 0.8935078169319297 1.3979400086720375 0.0 0.8494850021680094 [AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]AE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQNA{M(Oxidation (M))|F}Y;[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F}Y;[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQNA{M(Oxidation (M))|F}Y 4.5757;4.5149;4.2339;3.9555;3.9555;3.9555;3.8929;3.8929;3.8929;3.8495 -;-;-;-;-;-;-;-;-;- 518 1 1.764 41268.4 1.0 4971 4606 9574 HBL1_DMSO_200M_050219_2,9579 HBL1_DMSO_200M_050219_2,9579,SQRAFCTMHFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9580 52.181 25.0 2925200.0 25 0 343870.0 + 14517 IGQIKRIL 8 79 470.81900920968326 939.6234654861664 2 470.8189880251884 MULTI CID FTMS 0 0 0 9574 2677950.0 1.0 0 0.0 6 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 38.15118350030904 0.2652218139009398 4 {I|L}{[QG]|[NA]}{I|L}KR{I|L}{I|L} 8 -1 + 40.75 0.0 0.0 4.3369 4.3369 83.835 0.0 0.0 0.0 30.265931504406467 6.22486274231747 6.22486274231747 40.75048156944675 0 0.3494850021680094 0.0 0.0 0.6109243748081782 {I|L}{[QG]|[NA]}{I|L}KR{I|L}{I|L} 4.3369 + + 34 + 1 1.764 63646.7 1.0 4972 4606 9574 HBL1_DMSO_200M_050219_2,9580 HBL1_DMSO_200M_050219_2,9580,IGQIKRIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9581 52.182 50.0 885710.0 25 0 74542.0 + 21261 LPDTMSLTV 9 71 488.7531476276548 975.4917423221096 2 488.7530700564384 MULTI CID FTMS 0 0 0 9574 981198.3125 0.2576650866752231 15 -1.0661392211914062 7 Unmodified _LPDTMSLTV_ REV__ENSG00000134376|ENST00000367400|CRB1;REV__nc|ENSG00000134376|P82279-2|CRB1;REV__nc|ENSG00000134376|P82279-3|CRB1;REV__nc|ENSG00000134376|P82279-4|CRB1 30.22481116460888 0.1466181017706357 4 YAP{I|L}{[WT]|[RM]} 6 -1 24.922 0.0 0.0 2.5548 0.0 0.0 226.09549147773595 0.0 226.09549147773595 0.0 3.908103009885764 0.0 0.0 0 0.0 0.0 0.0 0.0 YAP{I|L}{[WT]|[RM]} 2.5548 - 222 1 1.764 40913.3 1.0 4973 4606 9574 HBL1_DMSO_200M_050219_2,9581 HBL1_DMSO_200M_050219_2,9581,LPDTMSLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9582 52.183 30.0 1267200.0 25 0 101510.0 28970 QDLIGQDLN 9 71 508.2565120008866 1014.4984710685732 2 508.2561828494072 MULTI CID FTMS 0 0 0 9574 907118.4375 0.5779562913111922 -1 0.1021194458007812 8 Unmodified _QDLIGQDLN_ ENSG00000156860|ENST00000356166|FBRS 20.41453444215458 0.284085796332423 4 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L} 4 5 26.0 0.0 0.0 2.5628 0.0 0.0 0.0 542.222048299295 542.222048299295 6.430600900274591 0.0 0.0 0.0 0 0.5 0.0 0.25 0.3807196863200844 + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L} 2.5628 + + 78 1 1.764 37609.9 1.0 4974 4606 9574 HBL1_DMSO_200M_050219_2,9582 HBL1_DMSO_200M_050219_2,9582,QDLIGQDLN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9583 52.185 67.0 822760.0 25 0 82231.0 + 5640 DPEAGGIGRVV 11 76 535.2862413920514 1068.5579298509026 2 535.2863036990166 MULTI CID FTMS 0 0 0 9574 807861.625 1.0 0 0.0 9 Unmodified _DPEAGGIGRVV_ ENSG00000139990|ENST00000341516|DCAF5;nc|ENSG00000139990|Q96JK2-2|DCAF5;nc|ENSG00000139990|Q96JK2-3|DCAF5 70.33199760932243 0.0314424197347918 4 [DP]EAGG{I|L} 7 4 69.953 0.0 0.0 6.5465 0.0 0.0 0.0 426.2468966119751 426.2468966119751 61.99433219358141 0.0 0.0 0.0 0 1.6989700043360187 1.6989700043360187 0.4247425010840047 0.0 + [DP]EAGG{I|L} 6.5465 + + 121 + 1 1.764 48461.4 1.0 4975 4606 9574 HBL1_DMSO_200M_050219_2,9583 HBL1_DMSO_200M_050219_2,9583,DPEAGGIGRVV True True DPEAGGIGRVV 52.184605 535.286303699017 13090835.0 9574.0 ENSG00000139990|ENST00000341516|DCAF5;;nc|ENSG00000139990|Q96JK2-3|DCAF5;;nc|ENSG00000139990|Q96JK2-2|DCAF5 4.496253967285156 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9584 52.191 369.0 249390.0 25 0 25379.0 + 41783 VPVIHHMT 8 113 467.25300746125646 932.4914619893128 2 467.2541992068291 MULTI CID FTMS 0 0 0 9574 350826.6875 1.0 0 0.0 10 Unmodified _VPVIHHMT_ REV__nc|ENSG00000178125|Q7Z4L9|PPP1R42 13.50788311687929 0.7113601687236069 4 VPP{I|L} 4 -1 52.735 0.0 0.0 5.6553 0.0 0.0 0.0 523.2155034223761 523.2155034223761 37.25054710168188 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 VPP{I|L} 5.6553 - 214 + 1 1.764 73943.0 1.0 4976 4606 9574 HBL1_DMSO_200M_050219_2,9584 HBL1_DMSO_200M_050219_2,9584,VPVIHHMT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9585 52.198 403.0 488910.0 25 0 28387.0 + 21858 LPPEKYMRV 9 170 378.2110647281344 1131.6113647846032 3 378.2109863162041 MULTI CID FTMS 0 0 0 9574 246970.3125 0.4005556756195674 -3 0.2734603881835937 11 Unmodified _LPPEKYMRV_ ENSG00000139618|ENST00000380152|BRCA2 49.93300154707207 0.0405168250806675 4 {I|L}PPEKV[YR]M 9 3 + 78.655 0.0 0.0 6.9507 6.9507 81.228 0.0 0.0 0.0 58.81228130928562 0.915149811213496 0.915149811213496 3.0102999566398125 0 0.3054621874040891 2.0 0.3807196863200844 0.9731975075880328 {I|L}PPEKV[YR]M;{I|L}PPEVK[YR]M;{I|L}PPEKY{[WT]|[RM]}V;{I|L}PPEKY[RV]M;{I|L}PPEKY{[CA]|SS}{I|L}V;{I|L}PPVEK[YR]M;{I|L}PVPEK[YR]M;{I|L}PPV{[SA]|[TG]}V[YR]M;{I|L}PVP{[SA]|[TG]}V[YR]M;{I|L}PPV{[SA]|[TG]}Y[RV]M 6.9507;6.6847;6.4187;6.4187;6.1527;6.0208;5.6415;5.4731;5.0938;4.941 -;-;+;-;-;-;-;-;-;- + 759 + 1 1.764 167784.7 1.0 4977 4606 9574 HBL1_DMSO_200M_050219_2,9585 HBL1_DMSO_200M_050219_2,9585,LPPEKYMRV True True LPPEKYMRV 52.198441 378.210986316204 29690955.0 9574.0 ENSG00000139618|ENST00000380152|BRCA2 6.4131293296813965 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9586 52.203 257.0 388170.0 25 0 53020.0 + 21844 LPPATQVV 8 114 412.7477448982944 823.4809368633888 2 412.7477905154228 MULTI CID FTMS 0 0 0 9574 239767.390625 1.0 0 0.0 12 Unmodified _LPPATQVV_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 34.18733598223924 0.3315367612694167 4 [{I|L}P][PA]TQVV 8 0 + 24.874 0.0 0.0 3.0206 3.0206 70.92 0.0 0.0 0.0 5.879038760610236 6.061603143133503 5.879038760610236 5.879038760610236 0 0.6549471895720985 1.6989700043360187 0.3252574989159953 0.0 + + [{I|L}P][PA]TQVV;[PA]PT{I|L}QVV;[PA]PTQ{I|L}VV;[TP]AP{I|L}QVV;[TP]APQ{I|L}VV;[PA]TP{I|L}QVV;[PA]TPQ{I|L}VV;[{I|L}P][PA]T[AG]VV;[PA]P{I|L}TQVV;[VP][NS]P{I|L}VV 3.0206;2.3067;2.2772;2.1756;2.1462;2.0115;1.9821;1.8958;1.7598;1.6049 +;-;-;-;-;-;-;-;-;- + 289 1 1.764 83680.0 1.0 4978 4606 9574 HBL1_DMSO_200M_050219_2,9586 HBL1_DMSO_200M_050219_2,9586,LPPATQVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9587 52.21 395.0 316100.0 25 0 40467.0 + + 15316 IPPEVQRI 8 105 476.2849823784856 950.5554118237712 2 476.2856628298759 MULTI CID FTMS 0 0 0 9574 231207.078125 0.5231106895596004 6 -0.3820266723632812 13 Unmodified _IPLHVYPL_ nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1 24.20995872069341 0.5349487244130675 4 {I|L}PPEV 5 -1 49.169 0.0 0.0 5.1727 0.0 0.0 0.0 412.2343844049438 412.2343844049438 33.39394387499517 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPEV 5.1727 - 232 + 1 1.764 99805.2 1.0 4979 4606 9574 HBL1_DMSO_200M_050219_2,9587 HBL1_DMSO_200M_050219_2,9587,IPLHVYPL False False IPPEVQRI 52.210272 476.2851 7839754.0 9574.0 nc|ENSG00000127463|Q8N766-4|EMC1;;nc|ENSG00000127463|Q8N766-2|EMC1;;ENSG00000127463|ENST00000477853|EMC1;;nc|ENSG00000127463|Q8N766-3|EMC1 0.1822839478651682 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9588 52.214 175.0 401930.0 25 0 25541.0 + + 20889 FPPPSANKI 9 116 485.7687766167918 0 485.7722656130791 PEAK CID FTMS 0 0 0 9574 169406.5625 0.0694194236751428 51 -4.294872283935547 14 Unmodified _LMPTGLPEL_ ENSG00000077063|ENST00000160373|CTTNBP2 18.13498045792455 0.2189554373504223 4 P{I|L}Q 3 -1 11.449 0.0 0.0 1.1808 0.0 0.0 147.0617220999806 481.2509859674438 628.3127080674244 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L}Q 1.1808 - 66 + 1 1.764 59170.4 1.0 4980 4606 9574 HBL1_DMSO_200M_050219_2,9588 HBL1_DMSO_200M_050219_2,9588,LMPTGLPEL False False FPPPSANKI 52.213672 485.772265613079 4887007.5 9574.0 ENSG00000077063|ENST00000160373|CTTNBP2 2.0320754051208496 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9589 52.221 385.0 318700.0 25 0 36505.0 + + 27419 IPLGPQSNV 9 162 462.261582371717 922.508611810234 2 462.7606994509697 MULTI CID FTMS 0 0 0 9574 161199.109375 0.3426183548914513 -3 0.2734603881835937 15 Unmodified _PIPRPGGMV_ ENST00000506965.5_1_5:176942058-176943946:-|nuORF;ENSG00000183258|ENST00000330503|DDX41;ENST00000505081.5_1_5:176943012-176943946:-|nuORF;ENST00000515562.1_1_5:176943012-176943857:-|nuORF;ENST00000503078.5_1_5:176938794-176943460:-|nuORF 13.50788311687929 0.4710407108020397 4 SV 2 -1 15.658 0.0 0.0 1.6974 0.0 0.0 718.39697653367 0.0 718.39697653367 0.0 -1.2448815138390952 -1.2448815138390952 0.0 0 0.0 0.0 0.2215141619232908 0.0 SV 1.6974 - 472 + 1 1.764 98122.4 1.0 4981 4606 9574 HBL1_DMSO_200M_050219_2,9589 HBL1_DMSO_200M_050219_2,9589,PIPRPGGMV False False IPLGPQSNV 52.220566 462.76069945097 4499915.0 9574.0 ENST00000506965.5_1_5:176942058-176943946:-|nuORF;;ENSG00000183258|ENST00000330503|DDX41;;ENST00000505081.5_1_5:176943012-176943946:-|nuORF;;ENST00000515562.1_1_5:176943012-176943857:-|nuORF;;ENST00000503078.5_1_5:176938794-176943460:-|nuORF 3.606203079223633 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9590 52.234 800.0 126500.0 25 0 8856.7 -1 0 97 954.4317386083012 1906.8489242834023 2 954.4334594607352 MULTI CID FTMS 0 0 0 9574 153031.609375 0.7044191734479619 -1 0.1021194458007812 16 4 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 67.424 0.0 0.0 3.5359 3.5359 75.014 0.0 0.0 0.0 3.433677739595033 45.20557629171186 3.433677739595033 9.013902021140495 0 1.2059771852360797 0.0 0.4247425010840047 0.3807196863200844 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQ[HV]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}[YG];[NP]{I|L}N[HM]WWEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM]{[RE]|[WV]}SEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQ[RV][W{M(Oxidation (M))|F}]{[QS]|[NT]} 3.5359;3.0632;3.0632;3.0632;3.0632;2.8365;2.8315;2.8168;2.7762;2.7295 -;-;-;-;-;-;-;-;-;- 1322 1 1.764 70680.7 0.7400000095367432 4982 4606 9574 HBL1_DMSO_200M_050219_2,9590 HBL1_DMSO_200M_050219_2,9590, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9591 52.245 516.0 511370.0 25 0 77716.0 -1 LMLQKERI 8 197 349.5381809755147 1045.592713526744 3 349.5375244021416 MULTI CID FTMS 0 0 0 9574 130897.5859375 0.2894487029642366 -2 0.1885871887207031 17 Oxidation (M) _LM(Oxidation (M))LQKERI_ ENSG00000126001|ENST00000397527|CEP250;nc|ENSG00000126001|Q9BV73-2|CEP250 25.399314129420983 0.5099049743284904 4 [VG]{I|L}{M(Oxidation (M))|F}RWR{I|L} 8 -1 + 58.893 0.0 0.0 5.6325 5.6325 81.765 0.0 0.0 0.0 10.66946789630613 7.61484602226524 7.61484602226524 7.386831541432308 0 0.8182503180159344 2.0 0.0 1.086696871556164 [VG]{I|L}{M(Oxidation (M))|F}RWR{I|L};[VG]{I|L}{M(Oxidation (M))|F}K{NN|[MP]|[D{I|L}]|[EV]}AA{I|L};[VG]{I|L}{M(Oxidation (M))|F}R[R{I|L}]W;[VG]{I|L}{M(Oxidation (M))|F}K{NN|[MP]|[D{I|L}]|[EV]}RV;[VG]{I|L}{M(Oxidation (M))|F}KWTPV;[VG]{I|L}{M(Oxidation (M))|F}K{NN|[MP]|[D{I|L}]|[EV]}[VG]V;R{I|L}{M(Oxidation (M))|F}[VG]WR{I|L};[VG]{I|L}[YR]T[QP]{I|L};R{I|L}{M(Oxidation (M))|F}[VG][R{I|L}]W;{[DS]|[MA]|[CV]|TT}{I|L}TRWR{I|L} 5.6325;4.926;4.9042;4.7007;4.3813;3.8201;3.7197;3.0217;2.9914;2.3735 -;-;-;-;-;-;-;-;-;- 378 + 1 1.764 223375.7 1.0 4983 4606 9574 HBL1_DMSO_200M_050219_2,9591 HBL1_DMSO_200M_050219_2,9591,LMLQKERI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9592 52.251 321.0 327340.0 25 0 28657.0 + 12778 GVPRTFKEI 9 131 523.8035925242567 1045.592632115313 2 523.8038207888603 MULTI CID FTMS 0 0 0 9574 115995.1640625 0.5452226472485673 -1 0.1021194458007812 18 Unmodified _GVPRTFKEI_ ENSG00000137947|ENST00000370500|GTF2B 34.40172386719151 0.1061884637610825 4 [VG]{I|L}{M(Oxidation (M))|F}K[WP]S{I|L} 9 6 + 45.293 0.0 0.0 4.3318 4.3318 66.407 0.0 0.0 0.0 0.6495754227618349 0.6495754227618349 0.6495754227618349 0.6495754227618349 0 0.7742275032520141 2.0 0.6237125054200234 0.3054621874040891 [VG]{I|L}{M(Oxidation (M))|F}K[WP]S{I|L};[VG]{[CT]|[{M(Oxidation (M))|F}G]}[R{I|L}]RE{I|L};[VG]{I|L}{M(Oxidation (M))|F}[R{I|L}][DN]{I|L};[VG]{[CT]|[{M(Oxidation (M))|F}G]}[R{I|L}]ER{I|L};[VG]{I|L}{M(Oxidation (M))|F}K{[CA]|SS}PV{I|L};{[QN]|[E{I|L}]|[KN]}[EP]{M(Oxidation (M))|F}S[{I|L}V]{I|L};[VG]{I|L}{M(Oxidation (M))|F}[R{I|L}]A{[CP]|[EA]}A;[VG]{I|L}{M(Oxidation (M))|F}[R{I|L}]A[DG]V;[VG]{I|L}{M(Oxidation (M))|F}K{[WT]|[RM]}PV;[VG]{I|L}{M(Oxidation (M))|F}K[{I|L}V]{[CP]|[EA]}A 4.3318;4.2697;4.2441;3.9818;3.8856;3.7075;3.55;3.2738;3.1712;3.1426 -;-;-;-;-;-;-;-;-;- 1132 + 1 1.764 86218.2 1.0 4984 4606 9574 HBL1_DMSO_200M_050219_2,9592 HBL1_DMSO_200M_050219_2,9592,GVPRTFKEI True True GVPRTFKEI 52.250513 523.80382078886 1211973.75 9574.0 ENSG00000137947|ENST00000370500|GTF2B 1.6502288778622944 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9593 52.264 800.0 281500.0 25 0 28154.0 + 24413 MFQNRVRPL 9 193 387.5495161221887 1159.626718966766 3 387.5495788455009 MULTI CID FTMS 0 0 0 9574 118130.15625 0.0094399326643533 6 -0.3820266723632812 19 Unmodified _MFQNRVRPL_ ENST00000564557.1_1_16:58633371-58663636:-|nuORF 42.09456458481378 0.0639583784996157 4 M{M(Oxidation (M))|F}Q[RN]PVR{I|L} 9 2 + 44.784 0.0 0.0 3.862 3.862 74.842 0.0 0.0 0.0 34.32686681809099 10.099334280795247 10.099334280795247 7.435012637084171 0 0.0 0.0 0.0 1.4386218330464624 M{M(Oxidation (M))|F}Q[RN]PVR{I|L};M{M(Oxidation (M))|F}{I|L}[VP]{[DA]|[EG]}VR{I|L};M{M(Oxidation (M))|F}[AG][RN]PVR{I|L};M{M(Oxidation (M))|F}Q[RN]VPR{I|L};M{M(Oxidation (M))|F}Q[RN]VR{I|L}P;M{I|L}{M(Oxidation (M))|F}[VP]{[DA]|[EG]}VR{I|L};M{M(Oxidation (M))|F}Q[RN]VRP{I|L};M{M(Oxidation (M))|F}Q[RN]P[R{I|L}]V;M{M(Oxidation (M))|F}{I|L}[VP]{[MG]|[TS]}PR{I|L};M{M(Oxidation (M))|F}[AG][RN]VPR{I|L} 3.862;3.2208;3.0679;2.9843;2.6169;2.5949;2.4651;2.3722;2.3431;2.1902 -;-;-;-;-;-;+;-;-;- + 777 + 1 1.764 181137.1 0.6800000071525574 4985 4606 9574 HBL1_DMSO_200M_050219_2,9593 HBL1_DMSO_200M_050219_2,9593,MFQNRVRPL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9595 52.268 11.0 5215200.0 25 0 1253200.0 13007 HAQKMVEFL 9 88 368.19447723393614 1101.5616023020084 3 368.1942626833916 MULTI CID FTMS 0 0 0 9594 5483279.5 0.5685715417437054 -14 1.332317352294922 1 Unmodified _HAQKMVEFL_ ENSG00000169251|ENST00000351193|NMD3 11.640296217721598 0.521594087909532 4 E{I|L}{M(Oxidation (M))|F} 3 8 21.682 0.0 0.0 1.9683 0.0 0.0 694.3554541648755 0.0 694.3554541648755 0.0 5.255762612236907 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}{M(Oxidation (M))|F} 1.9683 - 87 1 1.746 51107.0 1.0 4986 4607 9594 HBL1_DMSO_200M_050219_2,9595 HBL1_DMSO_200M_050219_2,9595,HAQKMVEFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9596 52.27 20.0 2147400.0 25 0 220100.0 + 9948 FPGKHFQEI 9 75 551.7875691100098 1101.5605852868196 2 551.7872192263603 MULTI CID FTMS 0 0 0 9594 3015876.0 0.6439678592163469 -14 1.332317352294922 2 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 23.80106514851385 0.2283505500606397 4 PE{M(Oxidation (M))|F}{I|L} 4 6 24.826 0.0 0.0 2.2537 0.0 0.0 597.3063221662125 0.0 597.3063221662125 0.0 3.856603226686701 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 PE{M(Oxidation (M))|F}{I|L} 2.2537 - 219 1 1.746 38813.5 1.0 4987 4607 9594 HBL1_DMSO_200M_050219_2,9596 HBL1_DMSO_200M_050219_2,9596,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9597 52.271 35.0 1884100.0 25 0 181460.0 + 3625 DADPVHRII 9 85 518.2831982781872 1034.5518436231744 2 518.2833740115166 MULTI CID FTMS 0 0 0 9594 1791444.625 0.9391540183528636 -2 0.1959609985351562 3 Unmodified _DADPVHRII_ ENST00000313064.2_1_2:232378824-232378857:-|nuORF 39.94969957227396 0.0757326808254658 4 {[DA]|[EG]}DPVH[R{I|L}]{I|L} 9 0 + 62.511 0.0 0.0 6.0424 6.0424 90.577 0.0 0.0 0.0 51.67388210840794 1.163385648463816 1.163385648463816 34.93353917260839 0 1.5941876774005248 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}DPVH[R{I|L}]{I|L};WD{I|L}[YG][R{I|L}]{I|L} 6.0424;2.6657 +;- + 58 + 1 1.746 55466.4 1.0 4988 4607 9594 HBL1_DMSO_200M_050219_2,9597 HBL1_DMSO_200M_050219_2,9597,DADPVHRII True True DADPVHRII 52.270809 518.283374011517 103078058.0 9594.0 ENST00000313064.2_1_2:232378824-232378857:-|nuORF 6.402299086252849 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9598 52.272 59.0 865820.0 25 0 134270.0 + 37060 TGFSPRQI 8 78 453.2455627525363 904.4765725718726 2 453.2457153201103 MULTI CID FTMS 0 0 0 9594 879111.125 0.0226099896104927 6 -0.4336051940917969 4 Unmodified _TGFSPRQI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 37.97399986684836 0.2681860861828418 4 TG{M(Oxidation (M))|F}S{I|L} 5 3 53.443 0.0 0.0 5.9088 0.0 0.0 0.0 396.2010592096313 396.2010592096313 43.76564018461562 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 TG{M(Oxidation (M))|F}S{I|L} 5.9088 - 80 + 1 1.746 46247.3 1.0 4989 4607 9594 HBL1_DMSO_200M_050219_2,9598 HBL1_DMSO_200M_050219_2,9598,TGFSPRQI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9599 52.274 54.0 783600.0 25 0 65615.0 + 38138 TPMNPANTI 9 79 479.7365594847557 957.4585660363114 2 479.7365600466728 MULTI CID FTMS 0 0 0 9594 866204.25 0.6040256908396627 2 -0.1044769287109375 5 Unmodified _TPMNPANTI_ ENSG00000118985|ENST00000237853|ELL2 39.94969957227396 0.0757326808254658 4 [TP][MN]PANT{I|L} 9 0 + 39.089 0.0 0.0 4.0826 4.0826 76.525 0.0 0.0 0.0 8.76164967796577 8.824995917031949 8.76164967796577 8.76164967796577 0 0.7429928190999391 1.3010299956639813 0.3054621874040891 0.3252574989159953 + + [TP][MN]PANT{I|L};[EP][WQ]ANT{I|L};[TP][MN]PAGGT{I|L};[EP][WQ]AGGT{I|L};[EP]{[CP]|[EA]}[KG]NT{I|L};[HA]V[DG][{M(Oxidation (M))|F}V]T{I|L};[EP]{[CP]|[EA]}[W{I|L}]T{I|L};[{I|L}T]DH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L} 4.0826;3.1675;3.1209;2.2001;1.7799;1.6387;1.1033;0.82474 +;-;-;-;-;-;-;- + 177 1 1.746 38469.5 1.0 4990 4607 9594 HBL1_DMSO_200M_050219_2,9599 HBL1_DMSO_200M_050219_2,9599,TPMNPANTI True True TPMNPANTI 52.273655 479.736560046673 33757140.0 9594.0 ENSG00000118985|ENST00000237853|ELL2 6.729006290435791 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9600 52.275 57.0 1080700.0 25 0 154120.0 + 22035 LPPPPPPAM 9 91 458.751710776598 915.488868619996 2 458.7516967654228 MULTI CID FTMS 0 0 0 9594 827136.5 0.1870132269108998 27 -1.9717025756835933 6 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP 6 3 51.515 0.0 0.0 5.6271 0.0 0.0 0.0 314.1161295882592 314.1161295882592 21.71659067315573 0.0 0.0 0.0 0 1.610924374808178 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.6271 + + 251 1 1.746 51648.6 1.0 4991 4607 9594 HBL1_DMSO_200M_050219_2,9600 HBL1_DMSO_200M_050219_2,9600,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9601 52.277 90.0 668700.0 25 0 83750.0 + 21960 LPPMDHSTI 9 78 505.7526348088312 1009.4907166844624 2 505.7523376345634 MULTI CID FTMS 0 0 0 9594 728590.125 0.7324840560220668 -3 0.2824287414550781 7 Unmodified _LPPMDHSTI_ ENSG00000064666|ENST00000263097|CNN2;nc|ENSG00000064666|Q99439-2|CNN2 48.345845343767074 0.0439967357579942 4 {I|L}P{NN|[MP]|[D{I|L}]|[EV]}D[HS]T{I|L} 9 0 + 58.21 0.0 0.0 5.7663 5.7663 88.268 0.0 0.0 0.0 25.742946587693964 8.957509373371622 8.957509373371622 19.525326533067485 0 0.805462187404089 2.0 0.7302046884880937 0.0 + + {I|L}P{NN|[MP]|[D{I|L}]|[EV]}D[HS]T{I|L};{[MG]|[TS]}[YE]STP{I|L}{I|L};{[MG]|[TS]}[YE]ST{I|L}P{I|L};{[MG]|[TS]}[YT]DTP{I|L}{I|L};[HS]{NN|[MP]|[D{I|L}]|[EV]}DTP{I|L}{I|L};{[MG]|[TS]}[YT]DT{I|L}P{I|L};[HS]{NN|[MP]|[D{I|L}]|[EV]}DT{I|L}P{I|L};{[MG]|[TS]}[YE]P{[MG]|[TS]}{I|L}{I|L};{[MG]|[TS]}[YE]{[RE]|[WV]}{I|L}{I|L} 5.7663;3.8321;3.5352;3.3595;3.185;3.0626;2.8882;1.3171;1.148 +;-;-;-;-;-;-;-;- + 162 + 1 1.746 51369.4 1.0 4992 4607 9594 HBL1_DMSO_200M_050219_2,9601 HBL1_DMSO_200M_050219_2,9601,LPPMDHSTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9602 52.28 118.0 574920.0 25 0 42073.0 + 39523 VAVFSQSSETT 11 89 578.2815174456143 1154.5484819580286 2 578.2814208865166 MULTI CID FTMS 0 0 0 9594 716927.625 0.7819885866679028 -1 0.093841552734375 8 Unmodified _VAVFSQSSETT_ REV__ENSG00000198961|ENST00000361189|PJA2;REV__nc|ENSG00000198961|O43164-2|PJA2 8.155526934196011 0.8366696279279818 4 {[VA]|[{I|L}G]}[PA]WPP[PA]VA 11 -1 40.221 0.0 0.0 3.4837 0.0 0.0 0.0 94.94766814130404 94.94766814130404 26.93244195069976 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}[PA]WPP[PA]VA 3.4837 - 575 1 1.746 60810.2 1.0 4993 4607 9594 HBL1_DMSO_200M_050219_2,9602 HBL1_DMSO_200M_050219_2,9602,VAVFSQSSETT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9603 52.283 160.0 436060.0 25 0 35091.0 + 25634 NFQQSVQEY 9 109 571.759195736268 1141.503838539336 2 571.7598754763603 MULTI CID FTMS 0 0 0 9594 575531.625 0.3485685400716721 -3 0.2824287414550781 9 Unmodified _NFQQSVQEY_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 61.357469665136826 0.0253304979873734 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPS 5 8 32.918 0.0 0.0 2.8838 0.0 0.0 0.0 534.2189013657609 534.2189013657609 11.174727504281172 0.0 0.0 0.0 0 0.0 0.0 0.7059771852360797 1.1906140654642814 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPS 2.8838 - 639 1 1.746 59122.9 1.0 4994 4607 9594 HBL1_DMSO_200M_050219_2,9603 HBL1_DMSO_200M_050219_2,9603,NFQQSVQEY True True NFQQSVQEY 52.282707 571.75987547636 24689552.0 9594.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-3|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;nc|ENSG00000006744|Q9BQ52-2|ELAC2 6.998854478200276 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9604 52.285 109.0 880010.0 25 0 142360.0 + 15231 IPFSKPVKV 9 103 338.883469980711 1013.6285805423332 3 338.8829833865166 MULTI CID FTMS 0 0 0 9594 509237.25 0.1695026972573577 -5 0.4862556457519531 10 Unmodified _IPFSKPVKV_ ENSG00000149262|ENST00000534064|INTS4 34.40172386719151 0.1061884637610825 4 {I|L}P{M(Oxidation (M))|F}SKVPKV 9 2 + 65.871 0.0 0.0 6.4985 6.4985 90.377 0.0 0.0 0.0 2.532611009975738 11.96272488392666 2.532611009975738 14.719712763997563 0 0.0 1.2218487496163564 0.3252574989159953 0.25 {I|L}P{M(Oxidation (M))|F}SKVPKV;{I|L}P{M(Oxidation (M))|F}V[KS]PKV;{I|L}PV{M(Oxidation (M))|F}[KS]PKV;{I|L}V[MT]KVPKV;{I|L}VP{M(Oxidation (M))|F}[KS]PKV;{I|L}[{I|L}T]K{[ES]|[DT]|[{I|L}C]}PKV;{I|L}[{I|L}T]KVKC[{I|L}P];{I|L}[{I|L}T]KV{[QV]|[N{I|L}]|[RA]|[KV]}DV 6.4985;5.0463;4.5995;3.4979;3.4727;0.9755;0.97107;0.83874 -;-;-;-;-;-;-;- 702 + 1 1.746 89531.9 1.0 4995 4607 9594 HBL1_DMSO_200M_050219_2,9604 HBL1_DMSO_200M_050219_2,9604,IPFSKPVKV True True IPFSKPVKV 52.285003 338.882983386517 147568104.0 9594.0 ENSG00000149262|ENST00000534064|INTS4 4.820915381113688 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9605 52.293 478.0 341670.0 25 0 18485.0 + -1 YYSKQYCI 8 133 562.7568338378319 1123.4991147424637 2 562.7559692263603 MULTI CID FTMS 0 0 0 9594 391884.25 1.0 0 0.0 11 Carbamidomethyl (C) _YYSKQYC(Carbamidomethyl (C))I_ REV__ENST00000341394.8_1_11:34120930-34121149:+|nuORF 15.847184025352805 0.6768015514314958 4 {I|L} 1 -1 15.59 0.0 0.0 1.3876 0.0 0.0 992.4041268047667 0.0 992.4041268047667 0.0 1.6105333940495292 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L} 1.3876 + + 117 + 1 1.746 123306.4 1.0 4996 4607 9594 HBL1_DMSO_200M_050219_2,9605 HBL1_DMSO_200M_050219_2,9605,YYSKQYCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9606 52.298 259.0 393340.0 25 0 50676.0 + + 22312 VPHTPSSYI 9 134 500.7585960155319 999.5026390978638 2 500.7576171755791 MULTI CID FTMS 0 0 0 9594 238953.75 0.6085424283043552 -4 0.3673019409179687 12 Unmodified _LPSFFNYI_ nc|ENSG00000205531|Q99733-2|NAP1L4;ENSG00000205531|ENST00000380542|NAP1L4 32.116972079565 0.368454113111938 4 [{I|L}P][HS][DG]VY{I|L} 9 -1 + 39.081 0.0 0.0 3.91 3.91 48.41 0.0 0.0 0.0 0.0 13.401662231496744 0.0 0.0 0 0.805462187404089 1.6989700043360187 1.424742501084005 0.0 [{I|L}P][HS][DG]VY{I|L};[HT]PV[DG]VY{I|L};[{I|L}V]AV[YC(Carbamidomethyl (C))]Y{I|L};{[VA]|[{I|L}G]}{I|L}V[YC(Carbamidomethyl (C))]Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS]WVY{I|L};[{I|L}V]A[YC(Carbamidomethyl (C))]VY{I|L};{[VA]|[{I|L}G]}{I|L}[YC(Carbamidomethyl (C))]VY{I|L};[VP]HT[DG]VY{I|L};{[TV]|[{I|L}S]}[YG]WVY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R{[ES]|[DT]|[{I|L}C]}VY{I|L} 3.91;3.91;2.9783;2.8991;2.8815;2.8022;2.7229;2.6306;2.5803;2.4834 -;-;-;-;-;-;-;-;-;- 1606 1 1.746 80884.2 1.0 4997 4607 9594 HBL1_DMSO_200M_050219_2,9606 HBL1_DMSO_200M_050219_2,9606,LPSFFNYI False False VPHTPSSYI 52.298257 500.757617175579 4035422.5 9594.0 nc|ENSG00000205531|Q99733-2|NAP1L4;;ENSG00000205531|ENST00000380542|NAP1L4 4.66625992457072 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9607 52.31 664.0 217510.0 25 0 14400.0 + 39914 VFQDRTLHV 9 143 557.8037040564267 1113.5928551796533 2 557.8035766482353 MULTI CID FTMS 0 0 0 9594 180548.75 1.0 0 0.0 13 Unmodified _VFQDRTLHV_ ENSG00000143315|ENST00000368090|PIGM 57.24910588100465 0.0276051374632116 4 V{M(Oxidation (M))|F}QDRT{I|L}HV 9 0 + 68.797 0.0 0.0 6.1779 6.1779 79.059 0.0 0.0 0.0 16.478174818886373 3.3496219575940955 3.3496219575940955 3.3496219575940955 0 2.079689690656103 0.0 0.6421590589602533 0.5994850021680094 + + V{M(Oxidation (M))|F}QDRT{I|L}HV;V{M(Oxidation (M))|F}QDRT{I|L}VH;V{M(Oxidation (M))|F}[AG]DRT{I|L}HV;V{M(Oxidation (M))|F}[AG]DRT{I|L}VH;V{M(Oxidation (M))|F}V{[WN]|[YH]}T{I|L}HV;[{M(Oxidation (M))|F}V]ENRT{I|L}HV;V{M(Oxidation (M))|F}V{[WN]|[YH]}T{I|L}VH;[{I|L}V]QQRDQEV;VV[C(Carbamidomethyl (C))M]RT{I|L}HV;VV[C(Carbamidomethyl (C))M]RT{I|L}VH 6.1779;5.8771;5.351;5.0502;4.1368;3.8612;3.836;3.75;3.693;3.3922 +;-;-;-;-;-;-;-;-;- + 658 + 1 1.746 111152.5 1.0 4998 4607 9594 HBL1_DMSO_200M_050219_2,9607 HBL1_DMSO_200M_050219_2,9607,VFQDRTLHV True True VFQDRTLHV 52.309815 557.803576648235 913013.6875 9594.0 ENSG00000143315|ENST00000368090|PIGM 6.816839059193929 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9609 52.314 9.8 4346800.0 25 0 484380.0 43962 YHDLAFQV 8 58 496.7437231812852 991.4728934293704 2 496.7437316775322 MULTI CID FTMS 0 0 0 9608 6008536.0 1.0 0 0.0 1 Unmodified _YHDLAFQV_ ENSG00000079432|ENST00000681038|CIC;nc|ENSG00000079432|Q96RK0-2|CIC 23.1484247019978 0.5573009939494978 4 [AG]V[WE]G{M(Oxidation (M))|F}QV 9 6 + 50.186 0.0 0.0 5.0617 5.0617 79.146 0.0 0.0 0.0 7.235381958267553 16.478174818886373 7.235381958267553 7.235381958267553 0 0.6747425010840047 1.5228787452803376 0.3807196863200844 0.0 [AG]V[WE]G{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}[WQ]G{M(Oxidation (M))|F}QV;[AG]V[WE]G{M(Oxidation (M))|F}[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]G{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}[WQ]G{M(Oxidation (M))|F}[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]G{M(Oxidation (M))|F}[AG]V 5.0617;4.332;4.133;4.0284;3.3978;3.0942 -;-;-;-;-;- 63 1 1.746 40083.9 1.0 4999 4608 9608 HBL1_DMSO_200M_050219_2,9609 HBL1_DMSO_200M_050219_2,9609,YHDLAFQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9610 52.328 800.0 230200.0 25 0 19207.0 35323 SSVAIAEL 8 231 395.2211862838869 788.4278196345738 2 395.2212402224541 MULTI CID FTMS 0 0 0 9608 157602.578125 0.5657234432511785 2 -0.0807533264160156 2 Unmodified _SSVAIAEL_ ENSG00000169994|ENST00000409816|MYO7B;ENST00000496841.5_1_2:128377972-128392002:+|nuORF;nc|ENSG00000169994|Q6PIF6-2|MYO7B;nc|ENSG00000169994|Q6PIF6|MYO7B 19.438996006549623 0.6237395211498085 4 {[QN]|[E{I|L}]|[KN]}[KS]A{[QN]|[E{I|L}]|[KN]} 7 5 + 28.058 0.0 0.0 3.5588 3.5588 73.265 0.0 0.0 0.0 6.657369154725025 6.777807052660805 6.657369154725025 6.657369154725025 0 0.0 0.8860566476931632 0.5941876774005249 0.0 {[QN]|[E{I|L}]|[KN]}[KS]A{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}A{[QN]|[E{I|L}]|[KN]};[{I|L}T]A[TA]A{[QN]|[E{I|L}]|[KN]};[TA]AT{I|L}A{[QN]|[E{I|L}]|[KN]};{[WS]|[C(Carbamidomethyl (C)){I|L}]}VRE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A[{I|L}T]{[QN]|[E{I|L}]|[KN]};[TA]{I|L}[TA]A{[QN]|[E{I|L}]|[KN]} 3.5588;2.7144;1.8819;1.8479;1.2428;0.25699;0.23197 -;-;-;-;-;-;- 203 1 1.746 142019.3 0.9300000071525574 5000 4608 9608 HBL1_DMSO_200M_050219_2,9610 HBL1_DMSO_200M_050219_2,9610,SSVAIAEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9611 52.336 478.0 379960.0 25 0 25387.0 + 13569 HPHVYSPVI 9 165 524.7817163530356 1047.548879772871 2 524.7824584841728 MULTI CID FTMS 0 0 0 9608 366313.625 0.7199140625954819 -1 0.0454750061035156 3 Unmodified _HPHVYSPVI_ ENSG00000204842|ENST00000673436|ATXN2;ENST00000482777.5_1_12:111893805-111908601:-|nuORF;ENST00000495342.1_1_12:111907876-111923612:-|nuORF;nc|ENSG00000204842|Q99700-3|ATXN2;nc|ENSG00000204842|Q99700-4|ATXN2;nc|ENSG00000204842|Q99700-5|ATXN2;nc|ENSG00000204842|Q99700|ATXN2 86.12129899796855 0.0160336270647063 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HVYSPV{I|L} 9 0 + 76.128 0.0 0.0 7.2673 7.2673 80.284 0.0 0.0 0.0 2.014224667125717 12.98332479720628 2.014224667125717 2.014224667125717 0 1.4049471895720984 0.5686362358410126 2.6549471895720984 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HVYSPV{I|L};[HV]YS{M(Oxidation (M))|F}SPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHYSPV{I|L};[VP]HHYSPV{I|L};{[QN]|[E{I|L}]|[KN]}EVYSPV{I|L};[HV]YSPHPV{I|L};[VG]NTVYSPV{I|L};[HV]PHYSPV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}RS{M(Oxidation (M))|F}SPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E[RN]SPV{I|L} 7.2673;7.075;6.8825;6.809;6.7414;6.4565;6.2051;5.9469;5.8001;5.7891 +;-;-;-;-;-;-;-;-;- + 5385 1 1.746 153500.5 1.0 5001 4608 9608 HBL1_DMSO_200M_050219_2,9611 HBL1_DMSO_200M_050219_2,9611,HPHVYSPVI True True HPHVYSPVI 52.336211 524.782458484173 4217808.0 9608.0 nc|ENSG00000204842|Q99700-5|ATXN2;;nc|ENSG00000204842|Q99700|ATXN2;;ENSG00000204842|ENST00000673436|ATXN2;;nc|ENSG00000204842|Q99700-3|ATXN2;;ENST00000495342.1_1_12:111907876-111923612:-|nuORF;;ENST00000482777.5_1_12:111893805-111908601:-|nuORF;;nc|ENSG00000204842|Q99700-4|ATXN2 7.310230573018392 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9612 52.345 497.0 620960.0 25 0 43374.0 + 34599 SPIENIQRV 9 199 528.2952121429744 1054.575871352749 2 528.2974731326103 MULTI CID FTMS 0 0 0 9608 346150.90625 0.2914174308040635 -3 0.2414360046386718 4 Unmodified _SPIENIQRV_ ENSG00000168036|ENST00000349496|CTNNB1;ENST00000465552.1_1_3:41275683-41277995:+|nuORF;ENST00000485265.1_1_3:41277322-41278230:+|nuORF 128.93241758739586 0.006154487147897 4 SP{I|L}EN{I|L}RQV 9 2 + 114.88 0.0 0.0 10.893 10.893 87.959 0.0 0.0 0.0 34.223393939155 4.054373458886175 4.054373458886175 4.054373458886175 0 2.385151878060192 2.0 0.3807196863200844 1.5253187046026266 SP{I|L}EN{I|L}RQV;SP{I|L}EN{I|L}RN{I|L};SP{I|L}ENR{I|L}QV;SP{I|L}EN{I|L}QRV;SP{I|L}EGG{I|L}RQV;SP{I|L}ENR{I|L}N{I|L};SP{I|L}EN{I|L}R[AG]V;SP{I|L}EN{I|L}VQR;SP{I|L}EGG{I|L}RN{I|L};SP{I|L}EGGR{I|L}QV 10.893;10.509;10.399;10.36;10.02;10.015;9.7722;9.7199;9.6357;9.5262 -;-;-;+;-;-;-;-;-;- + 10741 + 1 1.746 239299.2 1.0 5002 4608 9608 HBL1_DMSO_200M_050219_2,9612 HBL1_DMSO_200M_050219_2,9612,SPIENIQRV True True SPIENIQRV 52.345009 528.29747313261 10443571.0 9608.0 ENSG00000168036|ENST00000349496|CTNNB1;;ENST00000485265.1_1_3:41277322-41278230:+|nuORF;;ENST00000465552.1_1_3:41275683-41277995:+|nuORF 5.9908073743184405 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9613 52.349 187.0 437230.0 25 0 50110.0 15183 IPECNFYI 8 130 499.7344155167377 997.4542781002756 2 499.7339965701103 MULTI CID FTMS 0 0 0 9608 301393.90625 0.9458080306656368 -2 0.1393165588378906 5 Unmodified _IPECNFYI_ ENST00000332624.7_1_2:202285189-202285387:-|nuORF 15.768221252438446 0.6779680726941459 4 [YN]VDPVYE 8 7 + 35.297 0.0 0.0 3.5387 3.5387 67.87 0.0 0.0 0.0 3.010299956639805 3.010299956639805 3.010299956639805 3.010299956639805 0 0.0 1.3979400086720375 0.3807196863200844 0.0 [YN]VDPVYE;{M(Oxidation (M))|F}YVPDVQM;{M(Oxidation (M))|F}YV[Y{I|L}]YM;{[QS]|[NT]}VHHVYE;[{I|L}V]AVCCVYE;{M(Oxidation (M))|F}YV{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L};{M(Oxidation (M))|F}YVPD[MN]{I|L};{M(Oxidation (M))|F}YVPDVC(Carbamidomethyl (C))V;{[SA]|[TG]}GVHHVYE;{M(Oxidation (M))|F}YVPDV[AG]M 3.5387;3.2369;3.2266;3.1841;2.8723;2.7995;2.5361;2.3694;2.3644;2.3083 -;-;-;-;-;-;-;-;-;- 835 1 1.746 66770.7 1.0 5003 4608 9608 HBL1_DMSO_200M_050219_2,9613 HBL1_DMSO_200M_050219_2,9613,IPECNFYI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9614 52.359 570.0 326590.0 25 0 19113.0 + 38974 TVPVGGVVKSV 11 161 521.3182161111623 1040.6218792891243 2 521.3180419802666 MULTI CID FTMS 0 0 0 9608 247274.28125 0.9096861833364202 -3 0.2414360046386718 6 Unmodified _TVPVGGVVKSV_ ENSG00000261236|ENST00000569669|BOP1;nc|ENSG00000261236|Q14137-2|BOP1 28.23362336080872 0.4292685378469897 4 {[TV]|[{I|L}S]}PVG[VG]VKSV 11 0 + 51.594 0.0 0.0 4.958 4.958 85.246 0.0 0.0 0.0 13.312880657867808 5.91501207238673 5.91501207238673 23.173787509157663 0 0.3494850021680094 2.0 0.4690370897582285 0.0 + + {[TV]|[{I|L}S]}PVG[VG]VKSV;{[TV]|[{I|L}S]}PVG[VG][KT]A{I|L};[VP]G[RV]KS[W{I|L}];[VP]GKVRS[W{I|L}];{[NV]|[RG]}VPVKS[W{I|L}];[VP][RK]RS[W{I|L}];{[NV]|[RG]}PVVKS[W{I|L}];{[NV]|[RG]}VVPKS[W{I|L}];[VP][RK][VG]S[W{I|L}];[VP][KS]RR[W{I|L}] 4.958;2.7311;2.1389;2.0272;1.7604;1.5163;1.3019;0.94833;0.62626;0.29301 +;-;-;-;-;-;-;-;-;- + 832 + 1 1.746 148237.9 1.0 5004 4608 9608 HBL1_DMSO_200M_050219_2,9614 HBL1_DMSO_200M_050219_2,9614,TVPVGGVVKSV False True TVPVGGVVKSV 52.358604 521.318041980267 1891284.25 9608.0 nc|ENSG00000261236|Q14137-2|BOP1;;ENSG00000261236|ENST00000569669|BOP1 6.199487209320068 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9615 52.369 583.0 383280.0 25 0 59329.0 + -1 LMAPDMSSLK 10 154 554.7723968211671 1107.5302407091342 2 554.7711669802666 MULTI CID FTMS 0 0 0 9608 204576.46875 1.0 0 0.0 7 Oxidation (M) _LM(Oxidation (M))APDMSSLK_ REV__ENSG00000079616|ENST00000160827|KIF22;REV__nc|ENSG00000079616|Q14807-2|KIF22 22.736283301280096 0.4578556481593033 4 {I|L}{M(Oxidation (M))|F}S 3 -1 34.252 0.0 0.0 3.0926 0.0 0.0 0.0 757.3612764947874 757.3612764947874 13.449589044671946 0.0 0.0 0.0 0 0.2614393726401688 0.721246399047171 0.4247425010840047 0.0 {I|L}{M(Oxidation (M))|F}S 3.0926 - 431 + 1 1.746 166426.9 1.0 5005 4608 9608 HBL1_DMSO_200M_050219_2,9615 HBL1_DMSO_200M_050219_2,9615,LMAPDMSSLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9617 52.373 2.4 23515000.0 25 0 5930900.0 + 15406 IPPDQQRLI 9 46 540.3146414642733 1078.6147299953466 2 540.3149902224541 MULTI CID FTMS 0 0 0 9616 24730626.0 1.0 0 0.0 1 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 17.11289562659939 0.3734572693229295 4 {I|L}PPDQ 5 4 60.701 0.0 0.0 5.6277 0.0 0.0 0.0 525.3151949518186 525.3151949518186 53.7113751626007 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPDQ 5.6277 + + 19 + 1 1.711 53686.8 1.0 5006 4609 9616 HBL1_DMSO_200M_050219_2,9617 HBL1_DMSO_200M_050219_2,9617,IPPDQQRLI False True IPPDQQRLI 52.372929 540.314990222454 2322928896.0 9616.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC 5.064721902211507 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9618 52.374 5.2 14350000.0 25 0 1815000.0 + 4579 DAYSFSRKI 9 86 362.8575430016125 1085.5507996050374 3 362.8572265505791 MULTI CID FTMS 0 0 0 9616 10743001.0 1.0 0 0.0 2 Unmodified _DAYSFSRKI_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000538600.1_1_12:6631091-6632090:+|nuORF 29.081581746732265 0.1611639662936252 4 [WY]S{M(Oxidation (M))|F}S 5 5 23.64 0.0 0.0 2.1777 0.0 0.0 0.0 412.2688997858032 412.2688997858032 8.423552944845483 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 [WY]S{M(Oxidation (M))|F}S 2.1777 - 123 + 1 1.711 65150.2 1.0 5007 4609 9616 HBL1_DMSO_200M_050219_2,9618 HBL1_DMSO_200M_050219_2,9618,DAYSFSRKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9619 52.375 9.2 3925000.0 25 0 360900.0 + 41602 VPPLATNTV 9 69 456.2635930417542 910.5126331503084 2 456.2635681033134 MULTI CID FTMS 0 0 0 9616 6338642.5 0.9699464892620836 -2 0.1044769287109375 3 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 30.22481116460888 0.1466181017706357 4 [{I|L}P]PATNV{[TV]|[{I|L}S]} 9 3 + 30.379 0.0 0.0 3.3365 3.3365 67.705 0.0 0.0 0.0 3.6527926935124135 7.447274948966939 3.6527926935124135 3.0102999566398125 0 0.4247425010840047 0.0 0.4247425010840047 0.0 [{I|L}P]PATNV{[TV]|[{I|L}S]};[{I|L}P]APTNV{[TV]|[{I|L}S]};[VP][{I|L}P]A{[QS]|[NT]}{[TV]|[{I|L}S]};[{I|L}P]PATGGV{[TV]|[{I|L}S]};[{I|L}P]APTGGV{[TV]|[{I|L}S]};[{I|L}P]PAV{[QS]|[NT]}{[TV]|[{I|L}S]};[{I|L}P]APV{[QS]|[NT]}{[TV]|[{I|L}S]};[{I|L}P]PVA{[QS]|[NT]}{[TV]|[{I|L}S]} 3.3365;3.0059;2.3768;2.3252;1.9945;1.9089;1.5783;1.4719 -;-;+;-;-;-;-;- + 119 1 1.711 35054.0 1.0 5008 4609 9616 HBL1_DMSO_200M_050219_2,9619 HBL1_DMSO_200M_050219_2,9619,VPPLATNTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9620 52.376 24.0 2434000.0 25 0 180820.0 + 3623 DADPVHRII 9 88 345.85857568608765 1034.553897658463 3 345.8584167361259 MULTI CID FTMS 0 0 0 9616 1697186.875 0.9540246716386752 2 -0.0889244079589843 4 Unmodified _DADPVHRII_ ENST00000313064.2_1_2:232378824-232378857:-|nuORF 14.838274106304384 0.4350285940865338 4 [WD]PV{I|L}T 6 5 25.406 0.0 0.0 2.4558 0.0 0.0 0.0 320.1746004693969 320.1746004693969 15.94212497064703 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [WD]PV{I|L}T 2.4558 - 64 + 1 1.711 54322.3 1.0 5009 4609 9616 HBL1_DMSO_200M_050219_2,9620 HBL1_DMSO_200M_050219_2,9620,DADPVHRII False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9621 52.378 43.0 1594800.0 25 0 185910.0 + 22373 LPSQVSRVV 9 79 492.7956109218912 983.5766689105824 2 492.7955810427666 MULTI CID FTMS 0 0 0 9616 1303998.875 0.6479971237648864 1 -0.0217514038085937 5 Unmodified _LPSQVSRVV_ ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2 34.93206674587334 0.1032771302489716 4 {I|L}PSQV 5 4 62.18 0.0 0.0 6.3219 0.0 0.0 0.0 456.2585739064933 456.2585739064933 45.78122771229104 0.0 0.0 0.0 0 0.5994850021680094 1.3979400086720375 0.0 0.4247425010840047 + {I|L}PSQV 6.3219 + + 179 + 1 1.711 57116.4 1.0 5010 4609 9616 HBL1_DMSO_200M_050219_2,9621 HBL1_DMSO_200M_050219_2,9621,LPSQVSRVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9622 52.391 745.0 302990.0 25 0 23526.0 + 44228 YLHPHRLPL 9 195 382.5576743082647 1144.651193524994 3 382.8916808962822 MULTI CID FTMS 0 0 0 9616 160501.6875 1.0 0 0.0 6 Unmodified _YLHPHRLPL_ ENST00000245615.5_1_19:54692294-54692348:-|nuORF 31.26834338654808 0.1333407332142048 4 [Y{I|L}]HPHR{I|L}P{I|L} 9 0 + 33.584 0.0 0.0 2.934 2.934 68.586 0.0 0.0 0.0 10.273109370204455 1.6162250171743937 1.6162250171743937 4.036923375611291 0 0.5044321917401079 1.6989700043360187 0.0 0.0 + + [Y{I|L}]HPHR{I|L}P{I|L};[Y{I|L}]HPHR{I|L}{I|L}P;[H{I|L}]Y{[CT]|[{M(Oxidation (M))|F}G]}KKPR 2.934;2.5813;2.1856 +;-;- + 475 + 1 1.711 183785.3 1.0 5011 4609 9616 HBL1_DMSO_200M_050219_2,9622 HBL1_DMSO_200M_050219_2,9622,YLHPHRLPL False True YLHPHRLPL 52.390546 382.891680896282 1889645.75 9616.0 ENST00000245615.5_1_19:54692294-54692348:-|nuORF 6.365756988525391 3.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9624 52.403 620.0 252900.0 25 0 30910.0 + 32340 RYPDIQASY 9 151 556.7714111664018 0 556.7726318240166 PEAK CID FTMS 0 0 0 9623 68775.0 0.4707070519115576 1 -0.0671730041503906 1 Unmodified _RYPDIQASY_ ENSG00000101639|ENST00000506447|CEP192 20.41453444215458 0.197313647343139 4 NSAQH 5 8 36.682 0.0 0.0 3.3002 0.0 0.0 67.04862392813796 504.2409762018188 571.2896001299567 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 NSAQH 3.3002 - 412 + 1 1.711 122619.6 1.0 5012 4610 9623 HBL1_DMSO_200M_050219_2,9624 HBL1_DMSO_200M_050219_2,9624,RYPDIQASY False True RYPDIQASY 52.403264 556.772631824017 1588971.5 9623.0 ENSG00000101639|ENST00000506447|CEP192 5.81693681081136 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9625 52.407 173.0 658070.0 25 0 94858.0 + + 36994 TFVSKASAL 9 131 462.261582371717 922.508611810234 2 462.2634155154228 MULTI CID FTMS 0 0 0 9623 470745.59375 0.9218886090612266 -1 0.0217514038085937 2 Unmodified _TFLQTKSV_ ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;ENST00000513447.1_1_5:54566383-54570502:-|nuORF 28.486842064014134 0.4448922141344407 4 [{M(Oxidation (M))|F}T]VS[RK]SV 8 -1 + 29.524 0.0 0.0 3.2004 3.2004 66.74 0.0 0.0 0.0 2.563990251808874 6.336680902508512 2.563990251808874 2.832788147898992 0 0.4247425010840047 0.0 0.5891368308784531 0.0 [{M(Oxidation (M))|F}T]VS[RK]SV;[VS]KASA{I|L}[{M(Oxidation (M))|F}T];[{M(Oxidation (M))|F}T]VSK[VG]SV;[{M(Oxidation (M))|F}T]VSK[QT]{I|L};[KS]VASA{I|L}[{M(Oxidation (M))|F}T];[KS]AVSA{I|L}[{M(Oxidation (M))|F}T];[{M(Oxidation (M))|F}T]VPV{I|L}[{M(Oxidation (M))|F}T];[{M(Oxidation (M))|F}T]VSKAATV;[{M(Oxidation (M))|F}T]VSK{[SA]|[TG]}A{I|L};[{M(Oxidation (M))|F}T]VSKAAS{I|L} 3.2004;2.8934;2.8187;2.3696;2.2048;2.0941;1.983;1.9806;1.7666;1.7594 -;-;-;-;-;-;-;-;-;- 910 + 1 1.711 91620.5 1.0 5013 4610 9623 HBL1_DMSO_200M_050219_2,9625 HBL1_DMSO_200M_050219_2,9625,TFLQTKSV False False TFVSKASAL 52.406623 462.263415515423 3777992.0 9623.0 ENSG00000067248|ENST00000251636|DHX29;;ENST00000504778.5_1_5:54552318-54579000:-|nuORF;;ENST00000513447.1_1_5:54566383-54570502:-|nuORF 0.2278354068597158 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9626 52.411 210.0 645930.0 25 0 40822.0 + 4995 DGTIFHRSI 9 141 349.1859916815512 1044.5361456448536 3 349.1855651736259 MULTI CID FTMS 0 0 0 9623 256598.625 0.1554505598991443 -2 0.0807533264160156 3 Unmodified _DGTIFHRSI_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 14.40537977576856 0.4467465336100671 4 DGT{I|L}{M(Oxidation (M))|F}H 6 3 29.287 0.0 0.0 2.8038 0.0 0.0 0.0 371.2055728573973 371.2055728573973 -4.982321216704413 0.0 -4.982321216704413 0.0 0 0.0738194166937224 1.154901959985743 0.0 0.0 + DGT{I|L}{M(Oxidation (M))|F}H 2.8038 + + 392 + 1 1.711 112727.4 1.0 5014 4610 9623 HBL1_DMSO_200M_050219_2,9626 HBL1_DMSO_200M_050219_2,9626,DGTIFHRSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9627 52.421 597.0 295730.0 25 0 13687.0 + 753 LMAHAMEEV 9 194 515.2472067263716 1028.479860519543 2 515.2458984255791 MULTI CID FTMS 0 0 0 9623 193470.96875 1.0 0 0.0 4 Unmodified _AEQQGPEATV_ nc|ENSG00000121774|Q07666-3|KHDRBS1;ENST00000307714.12_1_1:32479575-32503673:+|nuORF;ENSG00000121774|ENST00000327300|KHDRBS1;nc|ENSG00000121774|Q07666-2|KHDRBS1 24.020572477871973 0.4289996903560794 4 NDA{M(Oxidation (M))|F}THV 7 9 25.627 0.0 0.0 2.4918 0.0 0.0 226.1174470447368 0.0 226.1174470447368 0.0 4.765675805248286 0.0 0.0 0 0.0 0.0 0.0 0.0 NDA{M(Oxidation (M))|F}THV 2.4918 - 2033 + 1 1.711 136620.4 1.0 5015 4610 9623 HBL1_DMSO_200M_050219_2,9627 HBL1_DMSO_200M_050219_2,9627,AEQQGPEATV False False LMAHAMEEV 52.421064 515.245898425579 901259.6875 9623.0 nc|ENSG00000121774|Q07666-3|KHDRBS1;;ENST00000307714.12_1_1:32479575-32503673:+|nuORF;;ENSG00000121774|ENST00000327300|KHDRBS1;;nc|ENSG00000121774|Q07666-2|KHDRBS1 3.407734632492065 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9628 52.433 716.0 583280.0 25 0 56634.0 + 14250 IEAWRNGLRK 10 169 414.905561739376 1241.694855818328 3 415.2413818240166 MULTI CID FTMS 0 0 0 9623 186135.25 0.1339116125910272 -2 0.0807533264160156 5 Unmodified _IEAWRNGLRK_ REV__ENSG00000118513|ENST00000341911|MYB;REV__ENSG00000185697|ENST00000522677|MYBL1;REV__nc|ENSG00000118513|P10242-10|MYB;REV__nc|ENSG00000118513|P10242-11|MYB;REV__nc|ENSG00000118513|P10242-12|MYB;REV__nc|ENSG00000118513|P10242-2|MYB;REV__nc|ENSG00000118513|P10242-3|MYB;REV__nc|ENSG00000118513|P10242-5|MYB;REV__nc|ENSG00000118513|P10242-6|MYB;REV__nc|ENSG00000118513|P10242-7|MYB;REV__nc|ENSG00000118513|P10242-8|MYB;REV__nc|ENSG00000118513|P10242-9|MYB;REV__nc|ENSG00000118513|P10242|MYB;REV__nc|ENSG00000185697|P10243-2|MYBL1 12.174745833636583 0.6432616012102976 4 {[QN]|[E{I|L}]|[KN]}ARE[H{I|L}]{I|L}YV 10 -1 + 50.807 0.0 0.0 4.0917 4.0917 75.009 0.0 0.0 0.0 9.088257071173729 11.518637558036673 9.088257071173729 6.73415899863631 0 0.0 2.0 0.2614393726401688 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}ARE[H{I|L}]{I|L}YV;{[QN]|[E{I|L}]|[KN]}AT[PS][H{I|L}]{I|L}YV;[{I|L}T]KP{M(Oxidation (M))|F}[YV]{I|L}YV;{[QN]|[E{I|L}]|[KN]}A[VG]E[H{I|L}]{I|L}YV;{[QN]|[E{I|L}]|[KN]}ARA[HQ]RYV;{[QN]|[E{I|L}]|[KN]}G[W{I|L}][H{I|L}]{I|L}YV;{[QN]|[E{I|L}]|[KN]}G{[VA]|[{I|L}G]}E[H{I|L}]{I|L}YV;{[QN]|[E{I|L}]|[KN]}AR{M(Oxidation (M))|F}[KS][RH]V;C(Carbamidomethyl (C))P[R{I|L}]EA[RN]KV;{I|L}{I|L}{[NV]|[RG]}{M(Oxidation (M))|F}[YV]{I|L}YV 4.0917;3.5494;3.3598;3.3536;2.989;2.856;2.7049;2.6802;2.6714;2.5718 -;-;-;-;-;-;-;-;-;- 2026 1 1.711 321593.0 1.0 5016 4610 9623 HBL1_DMSO_200M_050219_2,9628 HBL1_DMSO_200M_050219_2,9628,IEAWRNGLRK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9629 52.446 745.0 198240.0 25 0 11598.0 + 41264 VPGTKDSL 8 160 408.72743859457375 815.4403242559475 2 408.7268554568291 MULTI CID FTMS 0 0 0 9623 158038.390625 0.4110094601049103 3 -0.3073768615722656 6 Unmodified _VPGTKDSL_ REV__ENSG00000078403|ENST00000307729|MLLT10 24.67388899826682 0.525179942228231 4 {[DS]|[MA]|[CV]|TT}PG[K{I|L}]TV 8 -1 + 23.932 0.0 0.0 2.9348 2.9348 65.226 0.0 0.0 0.0 6.18440000316717 2.218487496163561 2.218487496163561 2.218487496163561 0 0.3252574989159953 0.0 0.3054621874040891 0.0 {[DS]|[MA]|[CV]|TT}PG[K{I|L}]TV;{[DS]|[MA]|[CV]|TT}PG[K{I|L}]S{I|L};{[DS]|[MA]|[CV]|TT}PG{[TV]|[{I|L}S]}K{I|L} 2.9348;2.6628;2.0722 -;-;- 186 + 1 1.711 114839.4 1.0 5017 4610 9623 HBL1_DMSO_200M_050219_2,9629 HBL1_DMSO_200M_050219_2,9629,VPGTKDSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9630 52.458 648.0 149260.0 25 0 14484.0 + -1 AYLMCLFCMFY 11 99 710.7915590464806 1419.5685651597612 2 711.7314330935478 MULTI CID FTMS 0 0 0 -1 0 7 Oxidation (M) _AYLMCLFCM(Oxidation (M))FY_ REV__nc|ENSG00000139880|Q86UP0-3|CDH24 3.5964929083625545 0.858179447565866 4 ANQEAQ 6 -1 29.641 0.0 0.0 2.088 0.0 0.0 327.1399712925732 448.1047762506469 775.2447475432201 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ANQEAQ 2.088 - 1060 + 1 1.711 69894.7 1.0 5018 4610 9623 HBL1_DMSO_200M_050219_2,9630 HBL1_DMSO_200M_050219_2,9630,AYLMCLFCMFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9632 52.462 0.71 72290000.0 25 0 11476000.0 + 4581 DAYSFSRKI 9 62 543.7830507900837 1085.5515486469674 2 543.7840453982353 MULTI CID FTMS 0 0 0 9631 67535960.0 0.4583911752533343 3 -0.3226203918457031 1 Unmodified _DAYSFSRKI_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000538600.1_1_12:6631091-6632090:+|nuORF 38.17557092003332 0.0854718145212029 4 {[DA]|[EG]}YS{M(Oxidation (M))|F} 5 4 55.758 0.0 0.0 5.1363 0.0 0.0 0.0 499.30103503053857 499.30103503053857 42.57007180900061 0.0 0.0 0.0 0 1.274227503252014 1.6989700043360187 0.3807196863200844 0.0 + {[DA]|[EG]}YS{M(Oxidation (M))|F} 5.1363 + + 49 + 1 1.69 45772.3 1.0 5019 4611 9631 HBL1_DMSO_200M_050219_2,9632 HBL1_DMSO_200M_050219_2,9632,DAYSFSRKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9633 52.463 5.6 7881300.0 25 0 1319500.0 + 13044 HAVGDIPGV 9 60 432.7324462929546 863.4503396527092 2 432.7324706912041 MULTI CID FTMS 0 0 0 9631 9839282.0 0.6820236703051079 4 -0.3770179748535156 2 Unmodified _HAVGDIPGV_ ENSG00000186468|ENST00000296674|RPS23;ENST00000429775.2_1_X:70182861-70183140:+|nuORF 40.44857923139169 0.0729940656229577 4 [HA]VGD{I|L} 6 3 45.463 0.0 0.0 5.2652 0.0 0.0 0.0 268.1308319802857 268.1308319802857 33.47295930833134 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.3807196863200844 0.0 + [HA]VGD{I|L} 5.2652 + + 48 1 1.69 42485.2 1.0 5020 4611 9631 HBL1_DMSO_200M_050219_2,9633 HBL1_DMSO_200M_050219_2,9633,HAVGDIPGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9634 52.464 5.5 10652000.0 25 0 1550000.0 + 35467 STLPKSLSL 9 69 473.28450311658895 944.554453299978 2 473.2845031619072 MULTI CID FTMS 0 0 0 9631 10913731.0 0.8242990528559864 1 -0.0947837829589843 3 Unmodified _STLPKSLSL_ chr20:43713106-43715163|43|124.74|0.37|8.4|+|0|MYBL2,None|1;chr20:43713106-43715221|22|13.86|0.02|9.29|+|0|MYBL2,None|1;ENSG00000101057|ENST00000217026|MYBL2;nc|ENSG00000101057|P10244-2|MYBL2 38.17557092003332 0.0854718145212029 4 {[MG]|[TS]}{I|L}PTVT{[QV]|[N{I|L}]|[RA]|[KV]} 9 4 + 44.09 0.0 0.0 4.6679 4.6679 74.839 0.0 0.0 0.0 27.33480698290458 4.137342758552691 4.137342758552691 4.771212547196619 0 1.0 0.0 0.4247425010840047 0.0 {[MG]|[TS]}{I|L}PTVT{[QV]|[N{I|L}]|[RA]|[KV]};{[MG]|[TS]}{I|L}PTVK{[TV]|[{I|L}S]};{[MG]|[TS]}{I|L}V[TP]T{[QV]|[N{I|L}]|[RA]|[KV]};{[MG]|[TS]}{I|L}V[TP]K{[TV]|[{I|L}S]};{[{M(Oxidation (M))|F}H]|[RQ]}[WK]T{[QV]|[N{I|L}]|[RA]|[KV]} 4.6679;4.1627;3.0014;2.4963;0.26088 -;-;-;-;- 111 + 1 1.69 49780.3 1.0 5021 4611 9631 HBL1_DMSO_200M_050219_2,9634 HBL1_DMSO_200M_050219_2,9634,STLPKSLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9635 52.465 28.0 1662100.0 25 0 173700.0 + 4392 DAVQFANRV 9 63 510.2671114413008 1018.5196699494016 2 510.2668945193291 MULTI CID FTMS 0 0 0 9631 1922508.375 0.7071546821942077 1 -0.0947837829589843 4 Unmodified _DAVQFANRV_ ENSG00000138678|ENST00000264409|GPAT3;ENSG00000158669|ENST00000396987|GPAT4;ENST00000509044.1_1_4:84519769-84525917:+|nuORF;ENST00000518628.1_1_8:41476250-41476497:+|nuORF 39.957323273325 0.0756908302845263 4 {[DA]|[EG]}Q[YK]K 6 6 34.939 0.0 0.0 3.4304 0.0 0.0 0.0 282.10757990411804 282.10757990411804 23.969771685254383 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.4247425010840047 0.3807196863200844 {[DA]|[EG]}Q[YK]K 3.4304 - 55 1 1.69 39709.4 1.0 5022 4611 9631 HBL1_DMSO_200M_050219_2,9635 HBL1_DMSO_200M_050219_2,9635,DAVQFANRV True True DAVQFANRV 52.465389 510.266894519329 16498790.0 9631.0 ENST00000509044.1_1_4:84519769-84525917:+|nuORF;;ENSG00000158669|ENST00000396987|GPAT4;;ENSG00000138678|ENST00000264409|GPAT3;;ENST00000518628.1_1_8:41476250-41476497:+|nuORF 4.079185883204143 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9636 52.467 49.0 1386400.0 25 0 127980.0 + 21668 LPLLLWFL 8 98 507.8212178516496 1013.6278827700992 2 507.8211852908134 MULTI CID FTMS 0 0 0 9631 965069.0625 0.8207591819317481 -1 0.0671730041503906 5 Unmodified _LPLLLWFL_ REV__ENSG00000244038|ENST00000602624|DDOST;REV__ENST00000477229.1_1_1:20987242-20987843:-|nuORF;REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|253|2|anti-sense;REV__L1PA6_dup546|chr2:49227587-49231532:-|1.156546377819926|0.2927699401366612|1.98|48.0|218|3|anti-sense;REV__nc|ENSG00000244038|P39656-2|DDOST;REV__nc|ENSG00000244038|P39656-3|DDOST;REV__nc|ENSG00000244038|P39656|DDOST 24.20995872069341 0.5349487244130675 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SKVPKV{I|L} 9 -1 + 51.27 0.0 0.0 5.058 5.058 70.313 0.0 0.0 0.0 9.79872819733373 11.706962271689749 9.79872819733373 1.249387366082999 0 0.0 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SKVPKV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SKVKPV{I|L};{I|L}P{M(Oxidation (M))|F}[KS][VP]KV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VV{[NV]|[RG]}KV{I|L};{I|L}[{I|L}T]KVK[QA]N;{I|L}[{I|L}T]KV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L};[KS]{[QV]|[N{I|L}]|[RA]|[KV]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}V{I|L};[KS]{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}KV{I|L} 5.058;4.9348;4.0067;2.7981;1.7322;1.1219;0.72163;0.5479 -;-;-;-;-;-;-;- 555 1 1.69 59555.3 1.0 5023 4611 9631 HBL1_DMSO_200M_050219_2,9636 HBL1_DMSO_200M_050219_2,9636,LPLLLWFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9637 52.468 63.0 1035100.0 25 0 115960.0 + 4996 DGTIFHRSI 9 85 523.2750109552703 1044.5354689773403 2 523.2750732302666 MULTI CID FTMS 0 0 0 9631 958880.0625 0.4480109958640235 -1 0.0671730041503906 6 Unmodified _DGTIFHRSI_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 53.40400417844725 0.0329064971918313 4 DGT{I|L}{M(Oxidation (M))|F}H 6 3 55.152 0.0 0.0 5.28 0.0 0.0 0.0 371.2051261956461 371.2051261956461 38.49144313929287 0.0 0.0 0.0 0 1.0994850021680094 0.0 0.0 0.0 + DGT{I|L}{M(Oxidation (M))|F}H 5.28 + + 192 + 1 1.69 53608.0 1.0 5024 4611 9631 HBL1_DMSO_200M_050219_2,9637 HBL1_DMSO_200M_050219_2,9637,DGTIFHRSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9638 52.47 57.0 1039500.0 25 0 105670.0 + 39301 VADPFEVTV 9 80 488.7531476276548 975.4917423221096 2 488.7531005740166 MULTI CID FTMS 0 0 0 9631 928774.0625 0.2438983498718172 20 -1.6015357971191406 7 Unmodified _VADPFEVTV_ ENSG00000125730|ENST00000245907|C3 38.15118350030904 0.0856056900103839 4 [EP]YAP{I|L}S{[TV]|[{I|L}S]} 9 7 + 33.808 0.0 0.0 3.4657 3.4657 71.025 0.0 0.0 0.0 0.5023491188713862 7.063879227253363 0.5023491188713862 4.77121254719663 0 0.4247425010840047 0.0 0.5 0.0 [EP]YAP{I|L}S{[TV]|[{I|L}S]};[EP]PYA{I|L}S{[TV]|[{I|L}S]};[EP]YPA{I|L}S{[TV]|[{I|L}S]};[EP]YP{I|L}AS{[TV]|[{I|L}S]};[EP]PY{I|L}AS{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}N[RP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DN]A{I|L}{[WT]|[RM]};{[VA]|[{I|L}G]}[YG][RP][WQ];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[WN]|[YH]}{I|L}{[WT]|[RM]} 3.4657;2.9766;2.9766;2.4875;2.4875;0.87945;0.19316;0.18763;0.025185 -;-;-;-;-;-;-;-;- 849 1 1.69 51401.1 1.0 5025 4611 9631 HBL1_DMSO_200M_050219_2,9638 HBL1_DMSO_200M_050219_2,9638,VADPFEVTV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9639 52.473 147.0 492060.0 25 0 28854.0 38761 TVCKCGAV 8 89 780.377449360249 779.3701728936489 1 780.3777953982353 MULTI CID FTMS 0 0 0 9631 660921.0625 0.3631723999420558 3 -0.3226203918457031 8 Unmodified _TVCKCGAV_ ENSG00000152455|ENST00000354919|SUV39H2;nc|ENSG00000152455|Q9H5I1-2|SUV39H2;nc|ENSG00000152455|Q9H5I1-3|SUV39H2 18.13498045792455 0.6430038125133779 4 [YE]{I|L}EQV 6 7 + 74.87 0.0 0.0 9.6065 9.6065 94.687 0.0 0.0 0.0 10.52378753635658 12.40417829939986 10.52378753635658 9.420080530223132 0 1.25 1.0969100130080565 1.5994850021680094 0.0 [YE]{I|L}EQV;[YE]{I|L}E[AG]V;{[QN]|[E{I|L}]|[KN]}YEQV;[YE]{I|L}QEV;[YE]{I|L}EVQ;[YE]{I|L}D{I|L}Q;{[QN]|[E{I|L}]|[KN]}YE[AG]V;{[QN]|[E{I|L}]|[KN]}YQEV;[YE]{I|L}[AG]EV;{[QN]|[E{I|L}]|[KN]}Y[AG]EV 9.6065;8.3978;8.2562;8.1907;8.0149;7.1148;7.0475;6.8404;6.437;5.6317 -;-;-;-;-;-;-;-;-;- 426 1 1.69 56870.4 1.0 5026 4611 9631 HBL1_DMSO_200M_050219_2,9639 HBL1_DMSO_200M_050219_2,9639,TVCKCGAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9640 52.475 135.0 1042900.0 25 0 125920.0 + 25273 MVVQDGIVKA 10 141 530.2977820446412 1058.5810111560822 2 530.2983276247978 MULTI CID FTMS 0 0 0 9631 577788.6875 0.1559822019419192 -2 0.0889244079589843 9 Unmodified _MVVQDGIVKA_ ENSG00000126432|ENST00000265462|PRDX5;nc|ENSG00000126432|P30044-2|PRDX5;nc|ENSG00000126432|P30044-3|PRDX5;nc|ENSG00000126432|P30044-4|PRDX5 53.40400417844725 0.0601721406801337 4 MVVQDK{I|L}QV 9 4 + 87.622 0.0 0.0 8.2773 8.2773 81.93 0.0 0.0 0.0 35.88508844549963 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.7134679910804405 2.0 0.7614393726401688 0.6989700043360187 MVVQDK{I|L}QV;MVVQDK{I|L}N{I|L};MVVQD{[VA]|[{I|L}G]}V[KA];MVV[AG]DK{I|L}QV;MVV[AG]DK{I|L}N{I|L};MVVQDK{I|L}[AG]V;MVVQD{[VA]|[{I|L}G]}[KA]V;MVVQDK{I|L}GG{I|L};MVV[AG]D{[VA]|[{I|L}G]}V[KA];MVVQD{[VA]|[{I|L}G]}[KG]{I|L} 8.2773;8.1109;7.7507;7.4074;7.2411;7.1484;7.0169;6.982;6.885;6.8505 -;-;+;-;-;-;-;-;-;- + 2291 + 1 1.69 114157.1 1.0 5027 4611 9631 HBL1_DMSO_200M_050219_2,9640 HBL1_DMSO_200M_050219_2,9640,MVVQDGIVKA True True MVVQDGIVKA 52.475387 530.2985 53938300.0 9631.0 ENSG00000126432|ENST00000265462|PRDX5;;nc|ENSG00000126432|P30044-2|PRDX5;;nc|ENSG00000126432|P30044-3|PRDX5;;nc|ENSG00000126432|P30044-4|PRDX5 6.747574011484782 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9641 52.479 162.0 761420.0 25 0 56913.0 + 21859 LPPEKYMRV 9 115 378.2110647281344 1131.6113647846032 3 378.2109863162041 MULTI CID FTMS 0 0 0 9631 564983.5625 0.9163343168670834 2 -0.240203857421875 10 Unmodified _LPPEKYMRV_ ENSG00000139618|ENST00000380152|BRCA2 39.94969957227396 0.0757326808254658 4 {I|L}PPEKV 6 3 71.261 0.0 0.0 6.2973 0.0 0.0 0.0 465.1899604235864 465.1899604235864 52.66637565609818 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.6861818737241735 {I|L}PPEKV 6.2973 - 603 + 1 1.69 112199.8 1.0 5028 4611 9631 HBL1_DMSO_200M_050219_2,9641 HBL1_DMSO_200M_050219_2,9641,LPPEKYMRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9642 52.487 452.0 580610.0 25 0 70686.0 -1 YRYCKVFTVFT 11 130 742.3721952301527 1482.7298375271052 2 742.3732177615166 MULTI CID FTMS 0 0 0 9631 471003.6875 1.0 0 0.0 11 Carbamidomethyl (C) _YRYC(Carbamidomethyl (C))KVFTVFT_ Tigger2b_Pri_dup1770|chr15:88634948-88635968:-|1.005140273448427|0.0574243708712047|4.13|47.0|58|2|anti-sense 5.731851221503515 0.8481046878870278 4 [VP]ASGPVSHQV 11 -1 63.621 0.0 0.0 4.2908 0.0 0.0 0.0 421.14558438084254 421.14558438084254 24.05333923492303 0.0 0.0 0.0 0 0.0 0.721246399047171 2.238786695683067 0.4247425010840047 [VP]ASGPVSHQV 4.2908 - 23659 1 1.69 182367.7 1.0 5029 4611 9631 HBL1_DMSO_200M_050219_2,9642 HBL1_DMSO_200M_050219_2,9642,YRYCKVFTVFT False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 9643 52.49 158.0 431380.0 25 0 40443.0 -1 SQRAFCTMHFY 11 93 732.3127787141924 1462.6110044951847 2 732.3139526247978 MULTI CID FTMS 0 0 0 9631 456982.5625 0.1619281748501243 5 -0.3921432495117187 12 Carbamidomethyl (C),Oxidation (M) _SQRAFC(Carbamidomethyl (C))TM(Oxidation (M))HFY_ ENST00000277415.15_1_9:137989658-137989826:+|nuORF 5.731851221503515 0.8481046878870278 4 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y 12 -1 + 71.463 0.0 0.0 4.886 4.886 79.868 0.0 0.0 0.0 2.244237387763093 55.97804375441612 2.244237387763093 9.09823369650912 0 0.8182503180159344 0.0 0.7302046884880937 1.0114393726401687 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]E[Y{M(Oxidation (M))|F}]MA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN][Y{M(Oxidation (M))|F}]EMA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[MN][MN]EMA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[QA][C(Carbamidomethyl (C))M]EMA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))R][MN]EMA{M(Oxidation (M))|F}Y;[EP][{M(Oxidation (M))|F}T][NS]QEMA{M(Oxidation (M))|F}Y 4.886;4.2639;4.2639;4.2639;2.272;1.8603;1.8135;1.7472;1.4487;0.80533 -;-;-;-;-;-;-;-;-;- 517 1 1.69 53498.1 1.0 5030 4611 9631 HBL1_DMSO_200M_050219_2,9643 HBL1_DMSO_200M_050219_2,9643,SQRAFCTMHFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9644 52.494 208.0 657260.0 25 0 72461.0 + 14518 IGQIKRIL 8 139 314.21522759496986 939.6238533851096 3 314.2148010134697 MULTI CID FTMS 0 0 0 9631 359172.65625 0.0486905001560668 6 -0.4129486083984375 13 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 24.67388899826682 0.525179942228231 4 K{I|L}KR{I|L}{I|L} 6 -1 31.002 0.0 0.0 3.2994 0.0 0.0 170.06822070906566 0.0 170.06822070906566 0.0 18.298766737092755 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.7742275032520141 K{I|L}KR{I|L}{I|L} 3.2994 - 75 + 1 1.69 112506.6 1.0 5031 4611 9631 HBL1_DMSO_200M_050219_2,9644 HBL1_DMSO_200M_050219_2,9644,IGQIKRIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9645 52.504 564.0 380170.0 25 0 31266.0 + -1 PLPPPPRC 8 168 467.25300746125646 932.4914619893128 2 467.2520324587822 MULTI CID FTMS 0 0 0 9631 326788.5625 0.9314814811515728 5 -0.3921432495117187 14 Carbamidomethyl (C) _PLPPPPRC(Carbamidomethyl (C))_ REV__ENSG00000175785|ENST00000393140|PRIMA1;REV__nc|ENSG00000175785|Q86XR5-2|PRIMA1 17.086550045450526 0.6584923310065985 4 VPP{I|L}EEH{I|L} 8 -1 + 53.153 0.0 0.0 5.7001 5.7001 87.583 0.0 0.0 0.0 21.90582296866024 1.2147820449879276 1.2147820449879276 16.532125137753432 0 0.0 2.0 0.0 0.0 VPP{I|L}EEH{I|L};VPP[DG][RH]GV;VPVDV[YE]{I|L};VP[RN][WY]V;VPV{[CA]|SS}T[KC]{I|L};VP{[WS]|[C(Carbamidomethyl (C)){I|L}]}T[KC]{I|L};VP[RN][HD]PV;VN{M(Oxidation (M))|F}[TP]RTV;V[WC(Carbamidomethyl (C))]{I|L}RTV;VP[RN][HD]VP 5.7001;3.9272;3.8254;3.8002;3.0927;3.0436;2.8317;2.2013;1.7848;1.6809 -;-;-;-;-;-;-;-;-;- 979 + 1 1.69 165746.1 1.0 5032 4611 9631 HBL1_DMSO_200M_050219_2,9645 HBL1_DMSO_200M_050219_2,9645,PLPPPPRC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9646 52.507 200.0 398960.0 25 0 34626.0 + 10753 FYKDSGITY 9 117 547.2630261985508 1092.5114994639016 2 547.2629272341728 MULTI CID FTMS 0 0 0 9631 239231.9375 1.0 0 0.0 15 Unmodified _FYKDSGITY_ ENSG00000108861|ENST00000226004|DUSP3;nc|ENSG00000108861|P51452-2|DUSP3 21.53697664764585 0.2571576504437394 4 WWKY{M(Oxidation (M))|F}TY 7 6 + 39.117 0.0 0.0 3.5805 3.5805 72.861 0.0 0.0 0.0 6.275910229652979 9.960310232820149 6.275910229652979 6.275910229652979 0 0.8182503180159344 1.3979400086720375 0.0 0.0 WWKY{M(Oxidation (M))|F}TY;[KT]DRY{M(Oxidation (M))|F}TY;WWTHS{I|L}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}TRY{M(Oxidation (M))|F}TY;[TA]ATRY{M(Oxidation (M))|F}TY;[KT]D[VG]Y{M(Oxidation (M))|F}TY;{[QD]|[EN]|[WG]|[KD]|[RS]}EKY{M(Oxidation (M))|F}TY;[KT]DEHS{I|L}TY;[Y{M(Oxidation (M))|F}]YHS{I|L}TY;[TA]AEKY{M(Oxidation (M))|F}TY 3.5805;3.006;2.9085;2.4231;2.1895;2.1582;2.1476;2.0608;1.9255;1.9139 -;-;-;-;-;-;-;-;-;- 586 1 1.69 68161.2 1.0 5033 4611 9631 HBL1_DMSO_200M_050219_2,9646 HBL1_DMSO_200M_050219_2,9646,FYKDSGITY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9647 52.52 702.0 287070.0 25 0 40183.0 + 33469 SIGKETIV 8 162 423.7503675672973 845.4861822013946 2 423.7504150271416 MULTI CID FTMS 0 0 0 9631 216173.671875 0.7580193783974984 -1 0.0671730041503906 16 Unmodified _SIGKETIV_ REV__ENSG00000163468|ENST00000295688|CCT3;REV__nc|ENSG00000163468|P49368-2|CCT3 36.04419817259434 0.3004715606373109 4 {[WN]|[YH]}GTG{I|L}T 7 -1 27.3 0.0 0.0 3.2289 0.0 0.0 0.0 113.12183828953836 113.12183828953836 -1.002480183341632 0.0 -1.002480183341632 0.0 0 0.0 1.0969100130080565 0.6989700043360187 0.0 {[WN]|[YH]}GTG{I|L}T 3.2289 - 862 1 1.69 158163.2 1.0 5034 4611 9631 HBL1_DMSO_200M_050219_2,9647 HBL1_DMSO_200M_050219_2,9647,SIGKETIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9648 52.525 304.0 678440.0 25 0 71275.0 + 41340 VPISDLHI 8 159 447.2584093654706 892.5022657977413 2 447.2585937380791 MULTI CID FTMS 0 0 0 9631 202083.46875 1.0 0 0.0 17 Unmodified _VPISDLHI_ REV__ENSG00000074964|ENST00000361221|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;REV__nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L 19.438996006549623 0.6237395211498085 4 VP 2 -1 41.766 0.0 0.0 4.6797 0.0 0.0 0.0 693.3590621938778 693.3590621938778 29.291746928241125 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 VP 4.6797 + + 269 + 1 1.69 159034.1 1.0 5035 4611 9631 HBL1_DMSO_200M_050219_2,9648 HBL1_DMSO_200M_050219_2,9648,VPISDLHI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9649 52.537 634.0 222780.0 25 0 10674.0 + 5641 DPEAGGIGRVV 11 173 535.2862413920514 1068.5579298509026 2 535.2881347537041 MULTI CID FTMS 0 0 0 9631 201751.984375 0.2497358187734192 5 -0.3921432495117187 18 Unmodified _DPEAGGIGRVV_ ENSG00000139990|ENST00000341516|DCAF5;nc|ENSG00000139990|Q96JK2-2|DCAF5;nc|ENSG00000139990|Q96JK2-3|DCAF5 36.506200033944 0.2662161991516171 4 [DP]EAG 5 6 39.227 0.0 0.0 3.671 0.0 0.0 0.0 596.3517526404745 596.3517526404745 12.544321917401078 0.0 0.0 0.0 0 0.75 1.3979400086720375 0.3054621874040891 0.0 + [DP]EAG 3.671 + + 604 + 1 1.69 111642.0 1.0 5036 4611 9631 HBL1_DMSO_200M_050219_2,9649 HBL1_DMSO_200M_050219_2,9649,DPEAGGIGRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9650 52.539 8.0 6180200.0 25 0 917940.0 -1 TSRCCCSK 8 72 472.6901880826372 0 472.6901428103447 PEAK CID FTMS 0 0 0 9631 175431.234375 1.0 0 0.0 19 Carbamidomethyl (C) _TSRC(Carbamidomethyl (C))CCSK_ ENST00000561400.1_1_15:64067831-64126137:-|nuORF 5.760428011301431 0.5786759180849727 4 {I|L}PTVT 5 -1 25.675 0.0 0.0 2.7217 0.0 0.0 186.8898832364081 242.1522616022094 429.0421448386176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 {I|L}PTVT 2.7217 - 54 + 1 1.69 44958.5 1.0 5037 4611 9631 HBL1_DMSO_200M_050219_2,9650 HBL1_DMSO_200M_050219_2,9650,TSRCCCSK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9651 52.552 800.0 458930.0 25 0 83878.0 + 21845 LPPATQVV 8 231 412.7477448982944 823.4809368633888 2 412.7477905154228 MULTI CID FTMS 0 0 0 9631 171285.640625 0.7143825529339536 5 -0.3921432495117187 20 Unmodified _LPPATQVV_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 42.96799951952854 0.1846367511955703 4 [TP]PAQ{I|L}VV 8 3 + 28.391 0.0 0.0 3.4477 3.4477 62.915 0.0 0.0 0.0 10.145601590246692 5.807808920067156 5.807808920067156 0.3933306640274843 0 0.5044321917401079 1.0457574905606752 0.9456290139465234 0.0 [TP]PAQ{I|L}VV;[TP]PA{I|L}QVV;[TP]PA[AG]{I|L}VV;[TP]PA{I|L}[AG]VV;[TP]PAQV{I|L}V;[TP]PA{I|L}N{I|L}V;[PA]PTQ{I|L}VV;[PA]PT{I|L}QVV;[{I|L}P][PA]TQVV;[TP][QA]P{I|L}VV 3.4477;3.4;2.323;2.2752;2.1003;2.0526;1.9202;1.8725;1.7084;1.6385 -;-;-;-;-;-;-;-;+;- + 1315 1 1.69 282206.4 0.9399999976158142 5038 4611 9631 HBL1_DMSO_200M_050219_2,9651 HBL1_DMSO_200M_050219_2,9651,LPPATQVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9653 52.557 7.5 6420100.0 25 0 1607900.0 + 9941 FPGKHFQEI 9 80 368.19447723393614 1101.5616023020084 3 368.1942626833916 MULTI CID FTMS 0 0 0 9652 6751925.0 0.7001197744867589 -9 0.655487060546875 1 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 17.11289562659939 0.3734572693229295 4 C(Carbamidomethyl (C))P{I|L}{M(Oxidation (M))|F} 4 7 27.423 0.0 0.0 2.4894 0.0 0.0 566.2996693341812 0.0 566.2996693341812 0.0 13.443350238481033 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))P{I|L}{M(Oxidation (M))|F} 2.4894 - 124 1 1.682 44318.2 1.0 5039 4612 9652 HBL1_DMSO_200M_050219_2,9653 HBL1_DMSO_200M_050219_2,9653,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9654 52.558 17.0 2779000.0 25 0 317870.0 + 9949 FPGKHFQEI 9 72 551.7875691100098 1101.5605852868196 2 551.7872802615166 MULTI CID FTMS 0 0 0 9652 3494737.25 0.746217173851353 -9 0.655487060546875 2 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 61.60191391372663 0.0251951588191061 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKHQ{M(Oxidation (M))|F}{I|L}E 9 3 + 58.896 0.0 0.0 5.3466 5.3466 82.926 0.0 0.0 0.0 16.935749724493128 16.478174818886373 16.478174818886373 9.208187539523747 0 0.9604093769761876 1.6989700043360187 1.0 0.7742275032520141 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKHQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKH[AG]{M(Oxidation (M))|F}{I|L}E;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[YK]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[AG][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GKH[YK]PE;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[YK][AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}P[YK][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.3466;4.5107;3.8092;3.2419;2.9684;2.9543;2.4011;2.0578 -;-;-;-;-;-;-;- 313 1 1.682 41421.1 1.0 5040 4612 9652 HBL1_DMSO_200M_050219_2,9654 HBL1_DMSO_200M_050219_2,9654,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9655 52.559 19.0 3443100.0 25 0 599230.0 + 15232 IPFSKPVKV 9 77 338.883469980711 1013.6285805423332 3 338.8831054568291 MULTI CID FTMS 0 0 0 9652 3004301.75 1.0 0 0.0 3 Unmodified _IPFSKPVKV_ ENSG00000149262|ENST00000534064|INTS4 21.53697664764585 0.2571576504437394 4 {I|L}P{M(Oxidation (M))|F}SK[VP]KV 9 0 + 48.663 0.0 0.0 4.8009 4.8009 51.667 0.0 0.0 0.0 19.145293596321125 0.0 0.0 0.0 0 0.0 1.0 0.0 0.25 + + {I|L}P{M(Oxidation (M))|F}SK[VP]KV;{I|L}P{M(Oxidation (M))|F}SK[VP]VK;{I|L}V[MT]K[VP]VK;{I|L}V[MT]K[VP]KV;{I|L}[{I|L}T]KVKC[{I|L}P] 4.8009;4.8009;2.3401;2.3401;1.3637 +;-;-;-;- + 321 + 1 1.682 65277.4 1.0 5041 4612 9652 HBL1_DMSO_200M_050219_2,9655 HBL1_DMSO_200M_050219_2,9655,IPFSKPVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9656 52.56 55.0 606910.0 25 0 60431.0 + 25635 NFQQSVQEY 9 64 571.759195736268 1141.503838539336 2 571.7587768435478 MULTI CID FTMS 0 0 0 9652 1104341.5 0.6688402299275223 2 -0.2278366088867187 4 Unmodified _NFQQSVQEY_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 15.847184025352805 0.4077185912009129 4 SQ[HA]Y 5 7 23.015 0.0 0.0 2.0162 0.0 0.0 537.2456731114047 0.0 537.2456731114047 0.0 8.023787536356577 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 SQ[HA]Y 2.0162 - 100 + 1 1.682 31978.8 1.0 5042 4612 9652 HBL1_DMSO_200M_050219_2,9656 HBL1_DMSO_200M_050219_2,9656,NFQQSVQEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9657 52.562 59.0 1037500.0 25 0 72931.0 + 3626 DADPVHRII 9 86 518.2831982781872 1034.5518436231744 2 518.2836791872978 MULTI CID FTMS 0 0 0 9652 885720.625 0.4643336849481237 3 -0.2822341918945312 5 Unmodified _DADPVHRII_ ENST00000313064.2_1_2:232378824-232378857:-|nuORF 38.17557092003332 0.0854718145212029 4 {[DA]|[EG]}DPVHR{I|L}{I|L} 9 0 + 60.613 0.0 0.0 5.8589 5.8589 90.521 0.0 0.0 0.0 49.01917804874024 4.2255342974912935 4.2255342974912935 60.61297186186231 0 1.4291746928241125 2.0 0.0 0.0 + + {[DA]|[EG]}DPVHR{I|L}{I|L} 5.8589 + + 42 + 1 1.682 53576.1 1.0 5043 4612 9652 HBL1_DMSO_200M_050219_2,9657 HBL1_DMSO_200M_050219_2,9657,DADPVHRII True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9658 52.564 75.0 1023700.0 25 0 129920.0 + 3879 DALAKVTKI 9 103 479.8003401497256 957.5861273662512 2 479.8003112673759 MULTI CID FTMS 0 0 0 9652 748748.0 0.3040894608200243 -1 0.0947837829589843 6 Unmodified _DALAKVTKI_ ENSG00000213380|ENST00000306875|COG8 70.92866715596459 0.0207399673367505 4 DA{I|L}AKVTK{I|L} 9 0 + 103.09 0.0 0.0 10.765 10.765 98.122 0.0 0.0 0.0 57.98840924329106 13.46787486224656 13.46787486224656 23.438718088259805 0 2.4489700043360187 2.0 0.3807196863200844 0.0 + + DA{I|L}AKVTK{I|L};{I|L}ADAKVTK{I|L};WRRVTK{I|L} 10.765;8.3178;4.6383 +;-;- + 696 + 1 1.682 64412.5 1.0 5044 4612 9652 HBL1_DMSO_200M_050219_2,9658 HBL1_DMSO_200M_050219_2,9658,DALAKVTKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9659 52.565 70.0 568560.0 25 0 43712.0 + -1 PSYWMIMIV 9 78 578.2815174456143 1154.5484819580286 2 578.2817260622978 MULTI CID FTMS 0 0 0 9652 719912.0625 0.785243860953956 4 -0.2973594665527344 7 Oxidation (M) _PSYWM(Oxidation (M))IMIV_ REV__ENSG00000110436|ENST00000278379|SLC1A2;REV__nc|ENSG00000110436|P43004-2|SLC1A2;REV__nc|ENSG00000110436|P43004-3|SLC1A2 4.75600775471527 0.7486543447549536 4 {[VA]|[{I|L}G]}[PA]PWPQ 8 -1 30.355 0.0 0.0 2.6291 0.0 0.0 0.0 305.08416246023484 305.08416246023484 21.40215041192178 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}[PA]PWPQ 2.6291 - 105 1 1.682 37521.1 1.0 5045 4612 9652 HBL1_DMSO_200M_050219_2,9659 HBL1_DMSO_200M_050219_2,9659,PSYWMIMIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9660 52.567 62.0 975500.0 25 0 87689.0 + + 41077 KYPASSSVF 9 99 493.2541734988002 984.4937940644004 2 493.2535278201103 MULTI CID FTMS 0 0 0 9652 752420.0625 0.3516417866328743 -2 0.161956787109375 8 Unmodified _VNEKYSVF_ ENSG00000260027|ENST00000239165|HOXB7 21.74664581756881 0.5868176546531598 4 [PS]ASS[YK]V{M(Oxidation (M))|F} 9 -1 + 30.225 0.0 0.0 3.0701 3.0701 68.937 0.0 0.0 0.0 1.0642479673041263 21.43197886090148 1.0642479673041263 4.101523083377469 0 0.8252574989159953 0.0 1.305462187404089 0.0 [PS]ASS[YK]V{M(Oxidation (M))|F};[PA]SSS[YK]V{M(Oxidation (M))|F};[PS]ASSV[YK]{M(Oxidation (M))|F};[PA]SSSV[YK]{M(Oxidation (M))|F};{[QS]|[NT]}[DV][YK]V{M(Oxidation (M))|F};{[QS]|[NT]}[DV]V[YK]{M(Oxidation (M))|F} 3.0701;2.6535;2.4916;2.075;0.89477;0.31632 -;-;-;-;-;- 244 1 1.682 51979.5 1.0 5046 4612 9652 HBL1_DMSO_200M_050219_2,9660 HBL1_DMSO_200M_050219_2,9660,VNEKYSVF False False KYPASSSVF 52.566813 493.25352782011 20654230.0 9652.0 ENSG00000260027|ENST00000239165|HOXB7 3.6605633894602456 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9661 52.568 70.0 708150.0 25 0 117370.0 + 22036 LPPPPPPAM 9 77 458.751710776598 915.488868619996 2 458.7520019412041 MULTI CID FTMS 0 0 0 9652 599863.4375 0.1356274292728466 32 -2.6735153198242188 9 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 4 [{I|L}P]PPPP 6 3 50.239 0.0 0.0 5.4877 0.0 0.0 0.0 314.1165980399109 314.1165980399109 15.67864400190856 0.0 0.0 0.0 0 1.2614393726401687 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.4877 + + 188 1 1.682 45120.5 1.0 5047 4612 9652 HBL1_DMSO_200M_050219_2,9661 HBL1_DMSO_200M_050219_2,9661,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9662 52.581 722.0 297350.0 25 0 14797.0 -1 0 161 918.419584038686 1834.824615144172 2 918.4234496951104 MULTI CID FTMS 0 0 0 9652 268887.59375 0.3013252155368948 -9 0.655487060546875 10 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQNPTY{I|L}{[QS]|[NT]} 16 -1 + 95.085 0.0 0.0 5.1822 5.1822 70.12 0.0 0.0 0.0 0.8029584238380352 0.8029584238380352 0.8029584238380352 0.8029584238380352 0 2.649649864804614 0.0 0.6307196863200843 1.4124379954164592 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQNPTY{I|L}{[QS]|[NT]};[NP]{I|L}NAD[RH]{M(Oxidation (M))|F}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}QGD[RH]{M(Oxidation (M))|F}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[AG]NPTY{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NADQNPTY{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQGGPTY{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGADQNPTY{I|L}{[QS]|[NT]};[NP]{I|L}NAD[RH]{M(Oxidation (M))|F}AGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[RH]{M(Oxidation (M))|F}AN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGAD[RH]{M(Oxidation (M))|F}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 5.1822;5.1384;4.8419;4.6909;4.6909;4.6909;4.6909;4.6472;4.6472;4.6472 -;-;-;-;-;-;-;-;-;- 156862 + 1 1.682 140883.8 1.0 5048 4612 9652 HBL1_DMSO_200M_050219_2,9662 HBL1_DMSO_200M_050219_2,9662, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9663 52.593 707.0 301780.0 25 0 78100.0 + 22275 LPRRPNDIYV 10 102 621.8518916682565 1241.6892304033129 2 621.8516723513603 MULTI CID FTMS 0 0 0 9652 219307.578125 0.4734632978099706 -3 0.1837081909179687 11 Unmodified _LPRRPNDIYV_ ENSG00000172336|ENST00000303151|POP7 30.43146612281011 0.2849569935312043 4 GDSRD{I|L}YV 8 5 29.984 0.0 0.0 2.4147 0.0 0.0 318.2093983380875 0.0 318.2093983380875 0.0 18.56363682482481 0.0 0.0 0 0.9826446478103829 0.0 0.0 0.9247425010840048 GDSRD{I|L}YV 2.4147 - 173 1 1.682 156274.7 1.0 5049 4612 9652 HBL1_DMSO_200M_050219_2,9663 HBL1_DMSO_200M_050219_2,9663,LPRRPNDIYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9664 52.607 781.0 249250.0 25 0 22634.0 -1 NWNCKMNQFY 10 129 710.7915590464806 1419.5685651597612 2 710.7922241091728 MULTI CID FTMS 0 0 0 9652 183533.140625 0.6993595323520411 -1 0.0947837829589843 12 Carbamidomethyl (C),Oxidation (M) _NWNC(Carbamidomethyl (C))KM(Oxidation (M))NQFY_ ENST00000244230.6_1_2:71360149-71360302:+|nuORF 7.289230182591677 0.6929195370588109 4 [AG]N{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y 13 -1 + 88.748 0.0 0.0 6.2518 6.2518 74.598 0.0 0.0 0.0 1.461280356782396 11.448658907276382 1.461280356782396 0.9017663034908878 0 1.1677353201839438 1.3010299956639813 0.6861818737241735 1.548455006504028 [AG]N{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;[AG]N{M(Oxidation (M))|F}C(Carbamidomethyl (C))TQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{M(Oxidation (M))|F}C(Carbamidomethyl (C))TQQNA{M(Oxidation (M))|F}Y;[AG]GG{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;[AG]GG{M(Oxidation (M))|F}C(Carbamidomethyl (C))TQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}C(Carbamidomethyl (C))TQQNA{M(Oxidation (M))|F}Y;[AG]N{M(Oxidation (M))|F}[CS]AQQGGA{M(Oxidation (M))|F}Y;[AG]N{M(Oxidation (M))|F}[CS]AQ[AG]NA{M(Oxidation (M))|F}Y 6.2518;6.1882;6.1488;6.0853;5.9801;5.9148;5.8117;5.7504;5.6127;5.6127 -;-;-;-;-;-;-;-;-;- 3017 1 1.682 137777.4 1.0 5050 4612 9652 HBL1_DMSO_200M_050219_2,9664 HBL1_DMSO_200M_050219_2,9664,NWNCKMNQFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9665 52.621 800.0 243150.0 25 0 18726.0 21653 LPLIYPHV 8 175 476.2849823784856 950.5554118237712 2 476.2859680056572 MULTI CID FTMS 0 0 0 9652 169776.4375 0.3841226229396925 12 -0.9514312744140624 13 Unmodified _LPLIYPHV_ ENST00000474026.5_1_1:223946905-223957668:+|nuORF;ENST00000487223.5_1_1:223946905-223962556:+|nuORF 24.20995872069341 0.5349487244130675 4 {I|L}PPE 4 5 50.165 0.0 0.0 5.2774 0.0 0.0 0.0 511.3000238127666 511.3000238127666 37.06608156627958 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPE 5.2774 - 575 + 1 1.682 147954.3 0.9700000286102296 5051 4612 9652 HBL1_DMSO_200M_050219_2,9665 HBL1_DMSO_200M_050219_2,9665,LPLIYPHV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9666 52.634 800.0 100050.0 25 0 28025.0 -1 0 35 1160.835624994532 3479.4850455837964 3 1161.169482409954 MULTI CID FTMS 0 0 0 9652 173382.140625 0.6858095191830254 -1 0.0947837829589843 14 4 E 1 -1 6.9897 0.0 0.0 0.20088 0.0 0.0 2823.2564676623497 524.1634043871071 3347.419872049457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20088 - 7 + 1 1.682 71245.9 0.7300000190734863 5052 4612 9652 HBL1_DMSO_200M_050219_2,9666 HBL1_DMSO_200M_050219_2,9666, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9667 52.642 322.0 397700.0 25 0 39386.0 38038 TPDLDINL 8 147 450.7370942742161 899.4596356152323 2 450.7362243533134 MULTI CID FTMS 0 0 0 9652 160716.359375 0.7380444845242986 -1 0.0947837829589843 15 Unmodified _TPDLDINL_ ENSG00000091409|ENST00000684293|ITGA6;nc|ENSG00000091409|P23229-3|ITGA6;nc|ENSG00000091409|P23229-4|ITGA6;nc|ENSG00000091409|P23229-5|ITGA6;nc|ENSG00000091409|P23229-6|ITGA6;nc|ENSG00000091409|P23229-7|ITGA6;nc|ENSG00000091409|P23229-9|ITGA6;nc|ENSG00000091409|P23229|ITGA6 26.34127834903884 0.4900704351052977 4 [VS]T 3 8 29.494 0.0 0.0 3.279 0.0 0.0 0.0 609.2879481073247 609.2879481073247 1.930052868494343 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 [VS]T 3.279 - 724 1 1.682 100632.8 1.0 5053 4612 9652 HBL1_DMSO_200M_050219_2,9667 HBL1_DMSO_200M_050219_2,9667,TPDLDINL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9668 52.648 352.0 385650.0 25 0 52872.0 22864 LSAPTAPAPL 10 146 469.2715830553223 936.5286131774446 2 469.2705261111259 MULTI CID FTMS 0 0 0 9652 166924.46875 0.9121812687686726 -1 0.0947837829589843 16 Unmodified _LSAPTAPAPL_ ENST00000466375.2_2_22:44579501-44579708:+|nuORF 24.020572477871973 0.4289996903560794 4 {[TV]|[{I|L}S]}V[PA][PA]PSV 10 4 + 41.845 0.0 0.0 4.4681 4.4681 82.849 0.0 0.0 0.0 6.989323437445677 7.278373646692373 6.989323437445677 18.776521148724857 0 0.6989700043360187 2.0 0.8882104921644451 0.0 {[TV]|[{I|L}S]}V[PA][PA]PSV;{[TV]|[{I|L}S]}V[PA][VS]PAP;{[TV]|[{I|L}S]}V[KP]EPAP;{[TV]|[{I|L}S]}V[PA][VS]APP;{[TV]|[{I|L}S]}V[PA]G{[TV]|[{I|L}S]}PP;{[TV]|[{I|L}S]}V[KG][YT]AV;{[TV]|[{I|L}S]}V[KP]EAPP;{[TV]|[{I|L}S]}V[PA]T[VG]PP;{[TV]|[{I|L}S]}V[KG][YT]G{I|L};[TP][R{I|L}][PA]PSV 4.4681;2.4632;2.1193;2.1192;1.9312;1.7916;1.7752;1.6943;1.433;1.422 -;-;-;-;-;-;-;-;-;- 1634 + 1 1.682 106330.9 1.0 5054 4612 9652 HBL1_DMSO_200M_050219_2,9668 HBL1_DMSO_200M_050219_2,9668,LSAPTAPAPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9669 52.662 800.0 291680.0 25 0 36430.0 + 986 AFSDRAEEF 9 188 536.2408427818899 1070.4671326305795 2 536.7432739138603 MULTI CID FTMS 0 0 0 9652 122131.5859375 0.3628178163277223 -1 0.0947837829589843 17 Unmodified _AFSDRAEEF_ ENSG00000117450|ENST00000319248|PRDX1 57.24910588100465 0.0276051374632116 4 {[MS]|[{M(Oxidation (M))|F}A]}SDREAE{M(Oxidation (M))|F} 9 2 + 38.866 0.0 0.0 3.6307 3.6307 63.168 0.0 0.0 0.0 0.2680249241196719 0.7821840590102696 0.2680249241196719 0.2680249241196719 0 1.4489700043360187 0.0 0.805462187404089 0.0 {[MS]|[{M(Oxidation (M))|F}A]}SDREAE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ADREAE{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}SDREEA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ADREEA{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}SDRAEE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ADRAEE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]EAE{M(Oxidation (M))|F};A{M(Oxidation (M))|F}{M(Oxidation (M))|F}ERD{[WT]|[RM]};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}AE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]EEA{M(Oxidation (M))|F} 3.6307;3.6057;3.3454;3.3203;3.2417;3.2167;3.0523;3.0214;2.9212;2.767 -;-;-;-;+;-;-;-;-;- + 2390 1 1.682 175455.8 0.8100000023841858 5055 4612 9652 HBL1_DMSO_200M_050219_2,9669 HBL1_DMSO_200M_050219_2,9669,AFSDRAEEF True True AFSDRAEEF 52.661978 536.74327391386 9934455.0 9652.0 ENSG00000117450|ENST00000319248|PRDX1 6.054630279541016 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9670 52.676 800.0 105390.0 25 0 2937.2 + -1 QYLNEKMYEF 10 128 690.8134115112575 0 690.8134033083916 PEAK CID FTMS 0 0 0 9652 115592.15625 1.0 0 0.0 18 Oxidation (M) _QYLNEKM(Oxidation (M))YEF_ REV__ENSG00000111837|ENST00000354489|MAK;REV__ENSG00000112144|ENST00000676107|CILK1;REV__nc|ENSG00000111837|P20794-3|MAK;REV__nc|ENSG00000111837|P20794|MAK;REV__nc|ENSG00000112144|Q9UPZ9-2|CILK1 10.073929032068715 0.3742530088597855 4 ANQQAEDHY 9 -1 38.37 0.0 0.0 2.7812 0.0 0.0 223.1213676787093 97.04146753482657 320.16283521353586 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 ANQQAEDHY 2.7812 - 668 + 1 1.682 63067.1 0.699999988079071 5056 4612 9652 HBL1_DMSO_200M_050219_2,9670 HBL1_DMSO_200M_050219_2,9670,QYLNEKMYEF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9671 52.684 383.0 284180.0 25 0 26891.0 + 44895 YPPPAPGI 8 141 406.2212944505399 810.4280359678799 2 406.2207214236259 MULTI CID FTMS 0 0 0 9652 115935.125 0.4185623454051744 -2 0.161956787109375 19 Unmodified _YPPPAPGI_ ENSG00000205352|ENST00000429243|PRR13;nc|ENSG00000205352|Q9NZ81-2|PRR13 41.81723621529253 0.2038889569391319 4 {[HG]|PP}APYGP{I|L} 8 4 + 43.893 0.0 0.0 5.4161 5.4161 73.53 0.0 0.0 0.0 2.07280713621401 14.011007396375136 2.07280713621401 2.07280713621401 0 0.5 0.4559319556497244 0.0 0.0 {[HG]|PP}APYGP{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PA]PGP{I|L};{[HG]|PP}AYPGP{I|L};{[HG]|PP}APGYP{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KQ]Y{I|L};[VP]P[MT]GP{I|L};{[HG]|PP}APGPY{I|L};{[HG]|PP}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}GP{I|L};[VP][MT]PGP{I|L};{[HG]|PP}V[MT]GP{I|L} 5.4161;5.1603;4.4559;3.9366;3.8132;3.7106;3.4456;3.3543;3.3392;3.2566 -;-;-;-;-;-;-;-;-;- 175 1 1.682 85953.1 1.0 5057 4612 9652 HBL1_DMSO_200M_050219_2,9671 HBL1_DMSO_200M_050219_2,9671,YPPPAPGI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9672 52.698 800.0 45800.0 25 0 2958.2 -1 0 73 954.4317386083012 1906.8489242834023 2 954.9349853396416 MULTI CID FTMS 0 0 0 9652 110806.0546875 0.6537670307828606 3 -0.2822341918945312 20 4 {I|L} 1 -1 5.4846 0.0 0.0 0.28762 0.0 0.0 1395.5476680351587 395.19236169986567 1790.7400297350243 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.28762 - 55 + 1 1.682 31618.6 0.4799999892711639 5058 4612 9652 HBL1_DMSO_200M_050219_2,9672 HBL1_DMSO_200M_050219_2,9672, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9674 52.702 3.7 14680000.0 25 0 3903400.0 + 15407 IPPDQQRLI 9 40 540.3146414642733 1078.6147299953466 2 540.3150512576103 MULTI CID FTMS 0 0 0 9673 14328590.0 0.5793864659956445 4 -0.1727447509765625 1 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 17.11289562659939 0.3734572693229295 4 {I|L}PPDQ 5 4 60.701 0.0 0.0 5.6277 0.0 0.0 0.0 525.3131807916624 525.3131807916624 53.7113751626007 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPDQ 5.6277 + + 15 + 1 1.679 52214.3 1.0 5059 4613 9673 HBL1_DMSO_200M_050219_2,9674 HBL1_DMSO_200M_050219_2,9674,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9675 52.703 12.0 3777700.0 25 0 369330.0 + 41603 VPPLATNTV 9 86 456.2635930417542 910.5126331503084 2 456.2636291384697 MULTI CID FTMS 0 0 0 9673 4960632.5 0.7590817872903218 2 -0.1368141174316406 2 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 40.44857923139169 0.0729940656229577 4 [VP][VS]PN 6 6 24.442 0.0 0.0 2.6844 0.0 0.0 0.0 314.17160466813965 314.17160466813965 4.683065105678029 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 [VP][VS]PN 2.6844 - 145 1 1.679 41706.6 1.0 5060 4613 9673 HBL1_DMSO_200M_050219_2,9675 HBL1_DMSO_200M_050219_2,9675,VPPLATNTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9676 52.704 3.2 16426000.0 25 0 2334700.0 + 44908 YPPPEVRNI 9 57 542.7934218667502 1083.5722908003004 2 542.7933837771416 MULTI CID FTMS 0 0 0 9673 15893007.0 0.857988799129325 1 -0.0824165344238281 3 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 15.738622578938676 0.4106572216562794 4 YPPPE 5 4 59.196 0.0 0.0 5.463 0.0 0.0 0.0 497.28391917371073 497.28391917371073 52.2062251842808 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YPPPE 5.463 + + 28 + 1 1.679 49130.1 1.0 5061 4613 9673 HBL1_DMSO_200M_050219_2,9676 HBL1_DMSO_200M_050219_2,9676,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9677 52.706 50.0 1590400.0 25 0 124930.0 33343 SGELFLRHS 9 112 349.1859916815512 1044.5361456448536 3 349.1856872439384 MULTI CID FTMS 0 0 0 9673 1168007.875 0.707593340125497 1 -0.0824165344238281 4 Unmodified _SGELFLRHS_ ENST00000526977.5_1_8:145651218-145651356:-|nuORF 19.361941925380144 0.3125782356748823 4 {I|L}{M(Oxidation (M))|F}H{I|L}RS 6 5 23.997 0.0 0.0 2.2974 0.0 0.0 273.0957224011582 0.0 273.0957224011582 0.0 14.393204479383463 0.0 0.0 0 0.1747425010840047 0.0 0.0 0.4247425010840047 {I|L}{M(Oxidation (M))|F}H{I|L}RS 2.2974 - 127 + 1 1.679 66784.0 1.0 5062 4613 9673 HBL1_DMSO_200M_050219_2,9677 HBL1_DMSO_200M_050219_2,9677,SGELFLRHS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9678 52.707 39.0 1928300.0 25 0 238220.0 19378 LERKLEDQLV 10 61 414.905561739376 1241.694855818328 3 415.2420226931572 MULTI CID FTMS 0 0 0 9673 1197956.5 0.8618479666205241 1 -0.0824165344238281 5 Unmodified _LERKLEDQLV_ ENSG00000173040|ENST00000344408|EVC2;nc|ENSG00000173040|Q86UK5-2|EVC2;nc|ENSG00000173040|Q86UK5-3|EVC2 7.945399516374404 0.6898843699695153 4 RE{I|L}A[YV]{I|L}YV 9 7 46.476 0.0 0.0 3.743 0.0 0.0 117.07947737861484 0.0 117.07947737861484 0.0 12.562893943202624 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 RE{I|L}A[YV]{I|L}YV 3.743 - 124 1 1.679 66758.7 1.0 5063 4613 9673 HBL1_DMSO_200M_050219_2,9678 HBL1_DMSO_200M_050219_2,9678,LERKLEDQLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9679 52.708 46.0 1244000.0 25 0 102790.0 + 35013 SQPPVQVSV 9 87 470.7594528355005 939.5043527378008 2 470.7600890994072 MULTI CID FTMS 0 0 0 9673 1022816.3125 0.4876192837765006 -3 0.3073768615722656 6 Unmodified _SQPPVQVSV_ ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12 28.49450938151212 0.1686335738423394 4 QSVQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 6 6 33.659 0.0 0.0 3.5826 0.0 0.0 204.12314043486964 0.0 204.12314043486964 0.0 14.208187539523747 0.0 0.0 0 0.25 0.0 0.4247425010840047 0.0 QSVQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.5826 - 224 + 1 1.679 52311.3 1.0 5064 4613 9673 HBL1_DMSO_200M_050219_2,9679 HBL1_DMSO_200M_050219_2,9679,SQPPVQVSV False True SQPPVQVSV 52.70816 470.760089099407 48441364.0 9673.0 nc|ENSG00000167258|Q9NYV4-3|CDK12;;nc|ENSG00000167258|Q9NYV4-2|CDK12;;ENSG00000167258|ENST00000447079|CDK12 4.471451838811238 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9680 52.71 65.0 909430.0 25 0 70558.0 + 29199 QGIGKLASV 9 94 436.7636199678484 871.5126870024968 2 436.7638122439384 MULTI CID FTMS 0 0 0 9673 953938.75 0.5479818261130249 -3 0.3073768615722656 7 Unmodified _QGIGKLASV_ ENSG00000177600|ENST00000321153|RPLP2;ENST00000525722.1_1_11:811587-812833:+|nuORF;ENST00000526222.5_1_11:810419-812833:+|nuORF;ENST00000532004.5_1_11:810000-812833:+|nuORF 36.12702656103203 0.0967173616627612 4 SV 2 7 23.94 0.0 0.0 2.747 0.0 0.0 667.4012653489797 0.0 667.4012653489797 0.0 3.4791017587309696 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 + SV 2.747 + + 268 + 1 1.679 54262.1 1.0 5065 4613 9673 HBL1_DMSO_200M_050219_2,9680 HBL1_DMSO_200M_050219_2,9680,QGIGKLASV True True QGIGKLASV 52.709727 436.763812243938 23578966.0 9673.0 ENST00000525722.1_1_11:811587-812833:+|nuORF;;ENSG00000177600|ENST00000321153|RPLP2;;ENST00000526222.5_1_11:810419-812833:+|nuORF;;ENST00000532004.5_1_11:810000-812833:+|nuORF 2.167169451713562 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9681 52.711 69.0 774320.0 25 0 174560.0 + 16436 KAENVLPQV 9 70 499.2883244518629 996.5620959705258 2 499.2882873415947 MULTI CID FTMS 0 0 0 9673 827326.3125 0.6520278184696591 -4 0.3291282653808594 8 Unmodified _KAENVLPQV_ REV__ENSG00000187240|ENST00000375735|DYNC2H1;REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 13.042465956692816 0.4836390050082244 4 {I|L}EVV 4 -1 41.186 0.0 0.0 4.1328 0.0 0.0 538.2876454084 0.0 538.2876454084 0.0 24.731975075880328 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}EVV 4.1328 - 40 1 1.679 44213.3 1.0 5066 4613 9673 HBL1_DMSO_200M_050219_2,9681 HBL1_DMSO_200M_050219_2,9681,KAENVLPQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9682 52.713 75.0 1376200.0 25 0 85179.0 + 4962 DGPRVFRV 8 100 315.8473737245311 944.5202917737934 3 315.8470336794853 MULTI CID FTMS 0 0 0 9673 712371.3125 0.0548630718843004 -6 0.4336051940917969 9 Unmodified _DGPRVFRV_ ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF;nc|ENSG00000179115|Q9Y285-2|FARSA 28.486842064014134 0.4448922141344407 4 DGVPRV{M(Oxidation (M))|F}R 8 2 + 83.049 0.0 0.0 8.7928 8.7928 85.057 0.0 0.0 0.0 30.0 4.8811663902112485 4.8811663902112485 3.0102999566398125 0 0.3494850021680094 2.0 0.0 0.3807196863200844 DGVPRV{M(Oxidation (M))|F}R;DGVPR{M(Oxidation (M))|F}VR;DGVPR{M(Oxidation (M))|F}RV;DG[RP]VV{M(Oxidation (M))|F}R;DG[RP]V{M(Oxidation (M))|F}VR;DG[RP]V{M(Oxidation (M))|F}RV;DRPGVV{M(Oxidation (M))|F}R;DGV{[WT]|[RM]}{I|L}VR;DGV{[WT]|[RM]}{I|L}RV;DVGPRV{M(Oxidation (M))|F}R 8.7928;8.474;8.276;7.1263;6.8076;6.6095;5.9022;5.8514;5.6533;5.5835 -;-;-;-;-;+;-;-;-;- + 286 + 1 1.679 86277.8 1.0 5067 4613 9673 HBL1_DMSO_200M_050219_2,9682 HBL1_DMSO_200M_050219_2,9682,DGPRVFRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9683 52.716 167.0 829890.0 25 0 126350.0 + 23832 LVGIAKGA 8 114 364.7371873149134 727.4598216966268 2 364.7369872927666 MULTI CID FTMS 0 0 0 9673 555999.125 1.0 0 0.0 10 Unmodified _LVGIAKGA_ REV__ENSG00000067057|ENST00000381125|PFKP;REV__ENSG00000141959|ENST00000349048|PFKL;REV__ENST00000466134.5_1_21:45719988-45734072:+|nuORF 14.581692164780916 0.6954967302934248 4 {I|L}V{I|L} 3 -1 47.619 0.0 0.0 6.546 0.0 0.0 0.0 399.20050989322505 399.20050989322505 29.16890597078744 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}V{I|L} 6.546 - 125 + 1 1.679 112736.7 1.0 5068 4613 9673 HBL1_DMSO_200M_050219_2,9683 HBL1_DMSO_200M_050219_2,9683,LVGIAKGA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9684 52.719 130.0 694420.0 25 0 149370.0 + 45746 YYIPGQGRSTY 11 43 652.817578260381 1303.6206035875618 2 652.8177368044853 MULTI CID FTMS 0 0 0 9673 531255.0 0.5814643762019953 -3 0.3073768615722656 11 Unmodified _YYIPGQGRSTY_ ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 33.4449034751529 0.3133739643825231 4 YY{I|L}PGQ 6 5 61.911 0.0 0.0 4.7492 0.0 0.0 0.0 579.2573294822325 579.2573294822325 48.4163750790475 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.4247425010840047 + YY{I|L}PGQ 4.7492 + + 122 + 1 1.679 74077.2 1.0 5069 4613 9673 HBL1_DMSO_200M_050219_2,9684 HBL1_DMSO_200M_050219_2,9684,YYIPGQGRSTY False True YYIPGQGRSTY 52.719029 652.817736804485 15940425.0 9673.0 ENSG00000114867|ENST00000346169|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1 7.485480626424153 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9685 52.721 97.0 518560.0 25 0 61670.0 + 3624 DADPVHRII 9 101 345.85857568608765 1034.553897658463 3 345.8582946658134 MULTI CID FTMS 0 0 0 9673 427537.625 0.2403279499223113 6 -0.337005615234375 12 Unmodified _DADPVHRII_ ENST00000313064.2_1_2:232378824-232378857:-|nuORF 20.453626601364224 0.2830276176381075 4 [WD]PVH 5 5 18.328 0.0 0.0 1.7716 0.0 0.0 0.0 397.2575777643188 397.2575777643188 4.348331157524967 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [WD]PVH 1.7716 - 61 + 1 1.679 50271.2 1.0 5070 4613 9673 HBL1_DMSO_200M_050219_2,9685 HBL1_DMSO_200M_050219_2,9685,DADPVHRII False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9686 52.724 165.0 437560.0 25 0 27848.0 15763 ISDITEESV 9 104 496.7437231812852 991.4728934293704 2 496.7434265017509 MULTI CID FTMS 0 0 0 9673 352221.53125 0.058620191549156 5 -0.2516326904296875 13 Unmodified _ISDITEESV_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN 18.13498045792455 0.3457906370836843 4 [VS]H[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}QV 8 6 + 32.936 0.0 0.0 3.322 3.322 74.352 0.0 0.0 0.0 8.859166410554707 0.6741000465273572 0.6741000465273572 8.859166410554707 0 0.4731975075880329 1.154901959985743 0.0 0.0 [VS]H[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}[WQ]G{M(Oxidation (M))|F}QV;[AG]V[WE]G{M(Oxidation (M))|F}QV;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]G{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}VVH{[HG]|PP}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[HG]|PP}[{I|L}V]{M(Oxidation (M))|F}W 3.322;2.4284;1.4184;1.284;0.43802;0.28779 -;-;-;-;-;- 173 1 1.679 61187.6 1.0 5071 4613 9673 HBL1_DMSO_200M_050219_2,9686 HBL1_DMSO_200M_050219_2,9686,ISDITEESV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9687 52.727 110.0 738570.0 25 0 61611.0 19719 LGNVLWLL 8 111 464.2847037480056 926.5548545628112 2 464.2850219607353 MULTI CID FTMS 0 0 0 9673 238805.234375 0.3641712236315714 -2 0.240203857421875 14 Unmodified _LGNVLWLL_ ENST00000328914.4_1_7:4807208-4807256:+|nuORF 19.438996006549623 0.6237395211498085 4 {I|L}PSR 4 7 51.815 0.0 0.0 5.5922 0.0 0.0 0.0 470.27570520572505 470.27570520572505 32.05591267411002 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 {I|L}PSR 5.5922 - 450 + 1 1.679 66253.0 1.0 5072 4613 9673 HBL1_DMSO_200M_050219_2,9687 HBL1_DMSO_200M_050219_2,9687,LGNVLWLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9688 52.74 797.0 202110.0 25 0 9429.6 + 43885 YFRDNPSEL 9 180 570.7696275842555 1139.524702235311 2 570.7695190310478 MULTI CID FTMS 0 0 0 9673 216451.34375 0.4229714500318307 1 -0.0824165344238281 15 Unmodified _YFRDNPSEL_ ENSG00000075089|ENST00000188312|ACTR6 55.50274090549119 0.0285720310785888 4 {I|L}{M(Oxidation (M))|F}SP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}C(Carbamidomethyl (C))E{I|L} 9 6 + 65.952 0.0 0.0 5.7877 5.7877 80.543 0.0 0.0 0.0 16.478174818886373 9.815666084354362 9.815666084354362 5.634322084507488 0 0.805462187404089 0.0 1.3807196863200843 0.4247425010840047 {I|L}{M(Oxidation (M))|F}SP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}C(Carbamidomethyl (C))E{I|L};{I|L}ETT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}C(Carbamidomethyl (C))E{I|L};{I|L}DDT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}C(Carbamidomethyl (C))E{I|L};{I|L}{M(Oxidation (M))|F}SP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[CG]E{I|L};{[QN]|[E{I|L}]|[KN]}TTC(Carbamidomethyl (C)){[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L};[AG]EY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PSE{I|L};[YE]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PSE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PSE{I|L};{I|L}{M(Oxidation (M))|F}SP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CA]|SS}D{I|L};{I|L}{M(Oxidation (M))|F}SPN[MT]APY 5.7877;5.2933;5.1719;4.9796;4.9432;4.9263;4.8676;4.8116;4.5127;4.2895 -;-;-;-;-;-;-;-;-;- 4133 + 1 1.679 122541.7 1.0 5073 4613 9673 HBL1_DMSO_200M_050219_2,9688 HBL1_DMSO_200M_050219_2,9688,YFRDNPSEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9689 52.746 307.0 267510.0 25 0 10620.0 + 38717 TTVKKFFSA 9 116 514.7916555194337 1027.5687581056673 2 514.7924072146416 MULTI CID FTMS 0 0 0 9673 176496.625 1.0 0 0.0 16 Unmodified _TTVKKFFSA_ ENSG00000154710|ENST00000284957|RABGEF1;nc|ENSG00000154710|Q9UJ41-3|RABGEF1;nc|ENSG00000154710|Q9UJ41-4|RABGEF1 36.506200033944 0.094635877243972 4 TTVKE 5 5 61.186 0.0 0.0 5.9544 0.0 0.0 0.0 466.23664270572505 466.23664270572505 44.185756335471424 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 TTVKE 5.9544 - 357 + 1 1.679 68069.6 1.0 5074 4613 9673 HBL1_DMSO_200M_050219_2,9689 HBL1_DMSO_200M_050219_2,9689,TTVKKFFSA True True TTVKKFFSA 52.746054 514.792407214642 1594617.625 9673.0 nc|ENSG00000154710|Q9UJ41-3|RABGEF1;;nc|ENSG00000154710|Q9UJ41-4|RABGEF1;;ENSG00000154710|ENST00000284957|RABGEF1 6.519203344980876 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9690 52.751 284.0 635520.0 25 0 98662.0 + 20890 LMPTLVGYL 9 159 336.19162683886185 0 336.1914245486259 PEAK CID FTMS 0 0 0 9673 138026.0 0.1027418724528723 4 -0.1727447509765625 17 Unmodified _LMPTLVGYL_ REV__ENSG00000171133|ENST00000302681|OR2K2 12.240655878213236 0.2865688622772898 4 W 1 -1 5.7133 0.0 0.0 0.85227 0.0 0.0 149.10626285565496 332.15354334049067 481.2598061961456 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 W 0.85227 - 36 + 1 1.679 146706.5 1.0 5075 4613 9673 HBL1_DMSO_200M_050219_2,9690 HBL1_DMSO_200M_050219_2,9690,LMPTLVGYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9691 52.765 800.0 180590.0 25 0 8268.1 -1 MISVHCSLNL 10 168 587.2935886857184 1172.5726244382367 2 587.2940551638603 MULTI CID FTMS 0 0 0 9673 142256.78125 0.8302113591464112 -1 0.1454200744628906 18 Carbamidomethyl (C) _MISVHC(Carbamidomethyl (C))SLNL_ ENST00000475614.6_1_1:42929522-42948338:+|nuORF;ENST00000477155.5_1_1:42938911-42948338:+|nuORF 26.268140514670165 0.3785003716575977 4 YPAVK{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 7 -1 67.828 0.0 0.0 5.7846 0.0 0.0 0.0 304.1304110162719 304.1304110162719 26.02948519340905 0.0 0.0 0.0 0 1.416386562212267 2.0 0.0 0.0 YPAVK{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 5.7846 - 2070 + 1 1.679 107508.9 0.8399999737739563 5076 4613 9673 HBL1_DMSO_200M_050219_2,9691 HBL1_DMSO_200M_050219_2,9691,MISVHCSLNL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9692 52.78 800.0 169140.0 25 0 10549.0 + 24223 MALCEAKL 8 144 439.7278237716572 877.4410946101144 2 439.7280761599541 MULTI CID FTMS 0 0 0 9673 108780.3984375 0.9569597061415176 -1 0.1454200744628906 19 Unmodified _MALCEAKL_ REV__ENSG00000168259|ENST00000457167|DNAJC7;REV__ENST00000403909.2_1_6:139659748-139659847:+|nuORF;REV__nc|ENSG00000168259|Q99615-2|DNAJC7 26.88365393820708 0.4786498634179528 4 MAPSTMK{I|L} 8 -1 + 76.465 0.0 0.0 8.7145 8.7145 96.322 0.0 0.0 0.0 33.712600430434705 12.184290373512042 12.184290373512042 18.19599075987611 0 0.3807196863200844 2.0 0.3252574989159953 0.0 MAPSTMK{I|L};MA{I|L}[DG]MK{I|L};MA{[RE]|[WV]}MK{I|L};MA[VS][RD]S{I|L};MA[VS]R{M(Oxidation (M))|F}PA;MA[VS]{[RE]|[WV]}SV;MA[VS][RD]TV;MA[HV]V[PG]PA;MAV{M(Oxidation (M))|F}[KP]SV;{[DS]|[MA]|[CV]|TT}PA[R{I|L}]GY 8.7145;6.6407;5.8194;4.5192;3.7829;3.7582;3.6819;3.1859;2.6932;1.9147 -;-;-;-;-;-;-;-;-;- 430 + 1 1.679 109401.2 0.6200000047683716 5077 4613 9673 HBL1_DMSO_200M_050219_2,9692 HBL1_DMSO_200M_050219_2,9692,MALCEAKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9694 52.784 16.0 2984600.0 25 0 434360.0 + 25274 MVVQDGIVKA 10 76 530.2977820446412 1058.5810111560822 2 530.2979003787041 MULTI CID FTMS 0 0 0 9693 2576506.0 0.6955641186667688 1 -0.0543975830078125 1 Unmodified _MVVQDGIVKA_ ENSG00000126432|ENST00000265462|PRDX5;nc|ENSG00000126432|P30044-2|PRDX5;nc|ENSG00000126432|P30044-3|PRDX5;nc|ENSG00000126432|P30044-4|PRDX5 41.95555342248728 0.1369168616057562 4 MVVQD{[VA]|[{I|L}G]}V[KA] 10 0 + 76.788 0.0 0.0 7.2539 7.2539 89.438 0.0 0.0 0.0 48.12030972946205 1.1709124234504031 1.1709124234504031 9.164539485499262 0 0.4247425010840047 2.0 1.110924374808178 0.3807196863200844 + + MVVQD{[VA]|[{I|L}G]}V[KA];MVV[AG]D{[VA]|[{I|L}G]}V[KA];MVVQD[K{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]};MVV[AG]D[K{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]};MVV[KC][RP]{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}[KS]D[R{I|L}][KA];{[QN]|[E{I|L}]|[KN]}[KS]{[RE]|[WV]}V[KA] 7.2539;6.3882;6.2892;5.4194;3.4685;0.32298;0.32298 +;-;-;-;-;-;- + 274 + 1 1.679 41143.8 1.0 5078 4614 9693 HBL1_DMSO_200M_050219_2,9694 HBL1_DMSO_200M_050219_2,9694,MVVQDGIVKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9695 52.786 25.0 2600000.0 25 0 333630.0 35468 STLPKSLSL 9 66 473.28450311658895 944.554453299978 2 473.2840759158134 MULTI CID FTMS 0 0 0 9693 908522.9375 0.0686194846546234 4 -0.1692161560058593 2 Unmodified _STLPKSLSL_ chr20:43713106-43715163|43|124.74|0.37|8.4|+|0|MYBL2,None|1;chr20:43713106-43715221|22|13.86|0.02|9.29|+|0|MYBL2,None|1;ENSG00000101057|ENST00000217026|MYBL2;nc|ENSG00000101057|P10244-2|MYBL2 22.736283301280096 0.2418982879461534 4 KT{[TV]|[{I|L}S]}PSVP 8 6 42.406 0.0 0.0 4.4895 0.0 0.0 117.0797596662125 0.0 117.0797596662125 0.0 32.48417080392825 0.0 0.0 0 0.6382104921644451 0.0 0.4247425010840047 0.3807196863200844 KT{[TV]|[{I|L}S]}PSVP 4.4895 - 74 1 1.679 54621.8 1.0 5079 4614 9693 HBL1_DMSO_200M_050219_2,9695 HBL1_DMSO_200M_050219_2,9695,STLPKSLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9696 52.787 26.0 2646400.0 25 0 323310.0 6116 DSVLELKAA 9 73 473.2671945402128 944.5198361472256 2 473.2669860720634 MULTI CID FTMS 0 0 0 9693 1209429.75 0.1494750950386834 -5 0.4115447998046875 3 Unmodified _DSVLELKAA_ ENSG00000136152|ENST00000349995|COG3;nc|ENSG00000136152|Q96JB2-2|COG3 14.838274106304384 0.4350285940865338 4 DVSP{[TV]|[{I|L}S]}TKV 9 6 + 48.242 0.0 0.0 5.1075 5.1075 79.045 0.0 0.0 0.0 28.40874491738596 12.22357194224834 12.22357194224834 6.817496819840656 0 0.0 0.0 0.7302046884880937 0.3807196863200844 DVSP{[TV]|[{I|L}S]}TKV;VDSP{[TV]|[{I|L}S]}TKV 5.1075;4.3857 -;- 66 + 1 1.679 60967.6 1.0 5080 4614 9693 HBL1_DMSO_200M_050219_2,9696 HBL1_DMSO_200M_050219_2,9696,DSVLELKAA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9697 52.788 57.0 1098200.0 25 0 124320.0 + 15235 IPFSKPVKV 9 73 507.8212178516496 1013.6278827700992 2 507.8212768435478 MULTI CID FTMS 0 0 0 9693 851881.8125 0.7244971854333325 2 -0.0695228576660156 4 Unmodified _IPFSKPVKV_ ENSG00000149262|ENST00000534064|INTS4 34.40172386719151 0.1061884637610825 4 {I|L}P{M(Oxidation (M))|F}SK 5 4 50.152 0.0 0.0 4.9477 0.0 0.0 0.0 438.2741714056788 438.2741714056788 16.24552818783222 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.4247425010840047 0.0 + {I|L}P{M(Oxidation (M))|F}SK 4.9477 + + 252 + 1 1.679 59999.2 1.0 5081 4614 9693 HBL1_DMSO_200M_050219_2,9697 HBL1_DMSO_200M_050219_2,9697,IPFSKPVKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9698 52.79 69.0 738390.0 25 0 86669.0 + 4997 DGTIFHRSI 9 70 523.2750109552703 1044.5354689773403 2 523.2751342654228 MULTI CID FTMS 0 0 0 9693 744750.6875 0.3479647874911271 2 -0.0695228576660156 5 Unmodified _DGTIFHRSI_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 21.59015148037692 0.2564810811560323 4 DGT{I|L}{M(Oxidation (M))|F}H 6 3 59.98 0.0 0.0 5.7423 0.0 0.0 0.0 371.2052040348592 371.2052040348592 51.8809421675007 0.0 0.0 0.0 0 0.5 0.958607314841775 0.4247425010840047 0.0 + DGT{I|L}{M(Oxidation (M))|F}H 5.7423 + + 83 + 1 1.679 46401.0 1.0 5082 4614 9693 HBL1_DMSO_200M_050219_2,9698 HBL1_DMSO_200M_050219_2,9698,DGTIFHRSI False True DGTIFHRSI 52.789922 523.275134265423 56211074.0 9693.0 nc|ENSG00000100023|Q13356-2|PPIL2;;ENSG00000100023|ENST00000398831|PPIL2 3.537965933481852 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9699 52.791 54.0 744940.0 25 0 89764.0 + 3706 DAFMEANKV 9 77 512.7437873639367 1023.4730217946734 2 512.7422363162041 MULTI CID FTMS 0 0 0 9693 544661.125 1.0 0 0.0 6 Unmodified _DAFMEANKV_ ENSG00000125386|ENST00000637812|FAM193A;nc|ENSG00000125386|P78312-2|FAM193A;nc|ENSG00000125386|P78312-3|FAM193A;nc|ENSG00000125386|P78312-4|FAM193A;nc|ENSG00000125386|P78312-5|FAM193A;nc|ENSG00000125386|P78312-6|FAM193A;nc|ENSG00000125386|P78312|FAM193A 41.8396318013385 0.0653578398400075 4 [W{M(Oxidation (M))|F}]MEANKV 8 2 + 40.144 0.0 0.0 3.9223 3.9223 70.032 0.0 0.0 0.0 3.246170095332417 3.246170095332417 3.246170095332417 3.246170095332417 0 0.5 0.0 0.3252574989159953 0.4247425010840047 [W{M(Oxidation (M))|F}]MEANKV;{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{I|L}M[WE];[W{M(Oxidation (M))|F}]MEA[KG]GV;[W{M(Oxidation (M))|F}]MEAGGKV;[W{M(Oxidation (M))|F}]ME[KQ]GV;{[QN]|[E{I|L}]|[KN]}A[{M(Oxidation (M))|F}V]M[WE];[W{M(Oxidation (M))|F}]ME[W{I|L}]{I|L};[W{M(Oxidation (M))|F}]M{I|L}{I|L}[WE] 3.9223;3.6051;3.1601;3.0174;2.8213;2.1774;2.0534;1.613 -;-;-;-;-;-;-;- 119 + 1 1.679 37360.4 1.0 5083 4614 9693 HBL1_DMSO_200M_050219_2,9699 HBL1_DMSO_200M_050219_2,9699,DAFMEANKV True True DAFMEANKV 52.791314 512.742236316204 3625923.75 9693.0 nc|ENSG00000125386|P78312-4|FAM193A;;nc|ENSG00000125386|P78312|FAM193A;;nc|ENSG00000125386|P78312-2|FAM193A;;ENSG00000125386|ENST00000637812|FAM193A;;nc|ENSG00000125386|P78312-6|FAM193A;;nc|ENSG00000125386|P78312-3|FAM193A;;nc|ENSG00000125386|P78312-5|FAM193A 8.386246681213379 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9700 52.793 56.0 621270.0 25 0 48711.0 27614 PLEYPSASL 9 77 488.7531476276548 975.4917423221096 2 488.7532836794853 MULTI CID FTMS 0 0 0 9693 554433.625 0.1455956316081446 23 -1.7367057800292969 7 Unmodified _PLEYPSASL_ ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400 18.13498045792455 0.3457906370836843 4 TV 2 9 17.193 0.0 0.0 1.7625 0.0 0.0 757.3647109273815 0.0 757.3647109273815 0.0 4.428527761275127 0.0 0.0 0 0.0 0.0 0.25 0.0 TV 1.7625 - 117 + 1 1.679 32600.4 1.0 5084 4614 9693 HBL1_DMSO_200M_050219_2,9700 HBL1_DMSO_200M_050219_2,9700,PLEYPSASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9701 52.795 123.0 400840.0 25 0 32940.0 + 42218 KLLDVVHPA 9 74 496.3011726530654 990.5877923729308 2 496.3006164431572 MULTI CID FTMS 0 0 0 9693 305871.6875 1.0 0 0.0 8 Unmodified _VSHLVGGILP_ nc|ENSG00000135624|Q99832-3|CCT7;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF 14.838274106304384 0.5985701837916485 4 [VS]H 3 7 32.664 0.0 0.0 3.2974 0.0 0.0 0.0 664.405211156387 664.405211156387 9.987737688117235 0.0 0.0 0.0 0 1.0 0.7958800173440752 0.4247425010840047 0.0 + [VS]H 3.2974 + + 123 1 1.679 45346.1 1.0 5085 4614 9693 HBL1_DMSO_200M_050219_2,9701 HBL1_DMSO_200M_050219_2,9701,VSHLVGGILP False False KLLDVVHPA 52.795258 496.300616443157 2100464.5 9693.0 nc|ENSG00000135624|Q99832-3|CCT7;;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;;ENSG00000135624|ENST00000258091|CCT7;;ENST00000461290.5_1_2:73461506-73471178:+|nuORF 3.844300826390585 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9702 52.799 188.0 487020.0 25 0 32175.0 + 21860 LPPEKYMRV 9 120 378.2110647281344 1131.6113647846032 3 378.2111083865166 MULTI CID FTMS 0 0 0 9693 265857.21875 0.4311879302284374 5 -0.2545890808105469 9 Unmodified _LPPEKYMRV_ ENSG00000139618|ENST00000380152|BRCA2 20.41453444215458 0.284085796332423 4 {I|L}PPEKYM[RV] 9 0 + 65.054 0.0 0.0 5.7488 5.7488 82.97 0.0 0.0 0.0 58.06411690283386 0.6683417370659868 0.6683417370659868 8.33668578233474 0 0.2614393726401688 2.0 0.0 0.0 + + {I|L}PPEKYM[RV];{I|L}PPEKY{[CA]|SS}[{I|L}V];{I|L}PPEV[WH][RV];{I|L}PV[EP][WH][RV];{I|L}V[HS]KY{[CA]|SS}[{I|L}V];{I|L}[WH]KY{[CA]|SS}[{I|L}V];{I|L}VP[EP][WH][RV];{I|L}[WH]V[WH][RV];{I|L}V[WH][WH][RV] 5.7488;5.0121;4.5134;2.8564;1.3567;1.0454;0.592;0.55156;0.28554 +;-;-;-;-;-;-;-;- + 173 + 1 1.679 83890.5 1.0 5086 4614 9693 HBL1_DMSO_200M_050219_2,9702 HBL1_DMSO_200M_050219_2,9702,LPPEKYMRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9703 52.807 447.0 276590.0 25 0 33289.0 + 6071 DSLVVRGV 8 126 422.74775882738135 843.4809647215627 2 422.7475463747978 MULTI CID FTMS 0 0 0 9693 212552.5 0.8791362758296399 -3 0.3226203918457031 10 Unmodified _DSLVVRGV_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000473243.5_1_19:19764878-19766320:-|nuORF;ENST00000496082.5_1_19:19764878-19766379:-|nuORF;ENST00000497556.5_1_19:19764878-19766187:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 53.57557251787612 0.1224291679108181 4 {[DS]|[MA]|[CV]|TT}{I|L}VV{[NV]|[RG]}V 8 0 + 33.65 0.0 0.0 3.9894 3.9894 82.259 0.0 0.0 0.0 20.551303186493683 6.075090722850263 6.075090722850263 33.65024697793565 0 0.7742275032520141 0.0 0.0 0.3054621874040891 + + {[DS]|[MA]|[CV]|TT}{I|L}VV{[NV]|[RG]}V 3.9894 + + 126 + 1 1.679 100796.2 1.0 5087 4614 9693 HBL1_DMSO_200M_050219_2,9703 HBL1_DMSO_200M_050219_2,9703,DSLVVRGV True True DSLVVRGV 52.806797 422.747546374798 1581952.375 9693.0 ENST00000473243.5_1_19:19764878-19766320:-|nuORF;;nc|ENSG00000105726|Q9HD20-2|ATP13A1;;ENSG00000105726|ENST00000357324|ATP13A1;;ENST00000497556.5_1_19:19764878-19766187:-|nuORF;;ENST00000496082.5_1_19:19764878-19766379:-|nuORF 6.941405296325684 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9704 52.821 800.0 229620.0 25 0 24199.0 + 43060 VYIDKVRSL 9 147 546.8245670816482 1091.6345812300965 2 547.3314697146416 MULTI CID FTMS 0 0 0 9693 133736.5625 0.0674470826048159 -5 0.4115447998046875 11 Unmodified _VYIDKVRSL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 22.65808497894818 0.2428932432760099 4 VY{I|L}DKVRS{I|L} 9 0 + 59.215 0.0 0.0 5.4244 5.4244 76.732 0.0 0.0 0.0 44.8741326490609 2.865612383257385 2.865612383257385 3.802112417116057 0 0.5994850021680094 2.0 0.2742275032520141 0.0 + + VY{I|L}DKVRS{I|L};VY{I|L}DKVRTV;VY{I|L}DK[R{I|L}]SV;VY{I|L}[WR]RS{I|L};VY{I|L}[WR]RTV;VY{I|L}VV[KQ]M{I|L};VY{I|L}VV[SG]RS{I|L};VY{I|L}VV[KQ]{M(Oxidation (M))|F}P;VY{I|L}VV[KQ]P{M(Oxidation (M))|F};VY{I|L}VV[SG]RTV 5.4244;5.0761;3.8092;3.6649;3.3166;2.9889;2.6406;2.6297;2.5889;2.2923 +;-;-;-;-;-;-;-;-;- + 555 + 1 1.679 141592.2 0.8100000023841858 5088 4614 9693 HBL1_DMSO_200M_050219_2,9704 HBL1_DMSO_200M_050219_2,9704,VYIDKVRSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9705 52.834 800.0 143530.0 25 0 5751.6 23073 LSLNDSHYGQQ 11 137 631.2918017347318 1260.5690505362636 2 631.2922241091728 MULTI CID FTMS 0 0 0 9693 116108.53125 1.0 0 0.0 12 Unmodified _LSLNDSHYGQQ_ ENSG00000183530|ENST00000327423|PRR14L;nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-3|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L 19.361941925380144 0.6323962752489956 4 {[TV]|[{I|L}S]}{I|L} 3 8 21.968 0.0 0.0 1.7427 0.0 0.0 0.0 944.3485620968904 944.3485620968904 12.98840924329106 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 + {[TV]|[{I|L}S]}{I|L} 1.7427 + + 582 1 1.679 88165.9 0.75 5089 4614 9693 HBL1_DMSO_200M_050219_2,9705 HBL1_DMSO_200M_050219_2,9705,LSLNDSHYGQQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9707 52.839 7.5 7788900.0 25 0 1845500.0 + 9942 FPGKHFQEI 9 92 368.19447723393614 1101.5616023020084 3 368.1943237185478 MULTI CID FTMS 0 0 0 9706 6701197.5 0.6948597448122177 -6 0.4659423828125 1 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 16.149105407346934 0.3995459350917656 4 QE{I|L}{M(Oxidation (M))|F} 4 7 37.607 0.0 0.0 3.414 0.0 0.0 566.2968006818375 0.0 566.2968006818375 0.0 23.003122090841828 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 QE{I|L}{M(Oxidation (M))|F} 3.414 - 308 1 1.679 56307.9 1.0 5090 4615 9706 HBL1_DMSO_200M_050219_2,9707 HBL1_DMSO_200M_050219_2,9707,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9708 52.84 16.0 3326300.0 25 0 362520.0 + 9950 FPGKHFQEI 9 84 551.7875691100098 1101.5605852868196 2 551.7877685427666 MULTI CID FTMS 0 0 0 9706 3400223.0 0.7260359265991654 -6 0.4659423828125 2 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 38.61474834105838 0.0830609365873449 4 PE 2 7 24.222 0.0 0.0 2.1989 0.0 0.0 857.4408535063712 0.0 857.4408535063712 0.0 2.795000083553205 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 PE 2.1989 - 123 1 1.679 48126.5 1.0 5091 4615 9706 HBL1_DMSO_200M_050219_2,9708 HBL1_DMSO_200M_050219_2,9708,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9709 52.841 18.0 3208100.0 25 0 298250.0 + 41723 VPSTAIREI 9 95 493.28763735717104 984.560721781142 2 493.2872192263603 MULTI CID FTMS 0 0 0 9706 1899633.0 0.2584059894845171 -4 0.3770179748535156 3 Unmodified _VPSTAIREI_ ENSG00000123374|ENST00000266970|CDK2;ENSG00000170312|ENST00000395284|CDK1;ENSG00000250506|ENST00000448471|CDK3;ENST00000475504.6_1_10:62539923-62545554:+|nuORF;ENST00000567351.5_2_17:73997368-73998786:+|nuORF;nc|ENSG00000123374|P24941-2|CDK2;nc|ENSG00000170312|P06493-2|CDK1 18.373094154950223 0.3393451798331396 4 VPSTA{I|L} 6 3 59.245 0.0 0.0 6.0174 0.0 0.0 0.0 413.2158297174438 413.2158297174438 8.67423111099761 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.0 0.0 + VPSTA{I|L} 6.0174 + + 284 + 1 1.679 50218.1 1.0 5092 4615 9706 HBL1_DMSO_200M_050219_2,9709 HBL1_DMSO_200M_050219_2,9709,VPSTAIREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9710 52.842 29.0 2550800.0 25 0 358200.0 + 15233 IPFSKPVKV 9 86 338.883469980711 1013.6285805423332 3 338.8831054568291 MULTI CID FTMS 0 0 0 9706 1811934.75 0.6031134355928128 3 -0.1148185729980468 4 Unmodified _IPFSKPVKV_ ENSG00000149262|ENST00000534064|INTS4 11.494710602746466 0.5255349189887087 4 {I|L}P{M(Oxidation (M))|F}SK[VP]KV 9 0 + 34.792 0.0 0.0 3.4324 3.4324 78.859 0.0 0.0 0.0 4.90463059526342 2.853350071374628 2.853350071374628 14.94341577071616 0 0.0 0.0 0.0 0.0 + + {I|L}P{M(Oxidation (M))|F}SK[VP]KV;{I|L}V[MT]K[VP]KV 3.4324;1.9581 +;- + 230 + 1 1.679 70799.9 1.0 5093 4615 9706 HBL1_DMSO_200M_050219_2,9710 HBL1_DMSO_200M_050219_2,9710,IPFSKPVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9711 52.844 38.0 1592100.0 25 0 220500.0 + 3880 DALAKVTKI 9 80 479.8003401497256 957.5861273662512 2 479.8003112673759 MULTI CID FTMS 0 0 0 9706 1610864.375 0.6542212857302263 2 -0.0359306335449218 5 Unmodified _DALAKVTKI_ ENSG00000213380|ENST00000306875|COG8 55.23464941255904 0.0288927259679799 4 {[DA]|[EG]}{I|L}AKVTK{I|L} 9 0 + 84.848 0.0 0.0 8.8606 8.8606 96.971 0.0 0.0 0.0 47.91756446232 12.587418566968154 12.587418566968154 21.70432836127297 0 2.1989700043360187 1.6989700043360187 0.3807196863200844 0.0 + + {[DA]|[EG]}{I|L}AKVTK{I|L};{[DA]|[EG]}{I|L}A{I|L}[KS]K{I|L};WRRVTK{I|L};[{I|L}A]KV{[DA]|[EG]}TK{I|L};[{I|L}A]KS[TP]TK{I|L};[{I|L}A]SK[TP]TK{I|L};[KA]V{I|L}{[DA]|[EG]}TK{I|L};[{I|L}A]KVT{[DA]|[EG]}K{I|L};{[SA]|[TG]}{I|L}K[TP]TK{I|L};[KT]VA[TP]TK{I|L} 8.8606;6.5941;4.3772;2.4688;2.1544;2.0634;1.7923;1.6276;1.5945;1.5385 +;-;-;-;-;-;-;-;-;- + 582 + 1 1.679 54254.2 1.0 5094 4615 9706 HBL1_DMSO_200M_050219_2,9711 HBL1_DMSO_200M_050219_2,9711,DALAKVTKI True True DALAKVTKI 52.843582 479.800311267376 34648168.0 9706.0 ENSG00000213380|ENST00000306875|COG8 5.989171187082927 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9712 52.847 188.0 381160.0 25 0 24782.0 -1 0 76 918.419584038686 1834.824615144172 2 918.9214965701104 MULTI CID FTMS 0 0 0 9706 468364.71875 0.4604118238858468 -6 0.4659423828125 6 4 [NP]{I|L}[TA]PPMQDAN{I|L}DP 15 -1 77.272 0.0 0.0 4.2114 0.0 0.0 0.0 257.05500463390325 257.05500463390325 65.20383716230303 0.0 0.0 0.0 0 0.8807196863200843 0.958607314841775 0.3054621874040891 0.7742275032520141 [NP]{I|L}[TA]PPMQDAN{I|L}DP 4.2114 - 1299 1 1.679 53793.4 1.0 5095 4615 9706 HBL1_DMSO_200M_050219_2,9712 HBL1_DMSO_200M_050219_2,9712, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9713 52.85 114.0 600520.0 25 0 83620.0 + 22037 LPPPPPPAM 9 95 458.751710776598 915.488868619996 2 458.7518798708916 MULTI CID FTMS 0 0 0 9706 457555.4375 0.1034519923344013 35 -2.8737945556640625 7 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 4 [{I|L}P]PPPP 6 3 47.708 0.0 0.0 5.2112 0.0 0.0 0.0 314.1176639932767 314.1176639932767 26.66000644387189 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 5.2112 + + 228 1 1.679 57156.7 1.0 5096 4615 9706 HBL1_DMSO_200M_050219_2,9713 HBL1_DMSO_200M_050219_2,9713,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9715 52.857 261.0 526840.0 25 0 144740.0 + 22276 LPRRPNDIYV 10 68 621.8518916682565 1241.6892304033129 2 621.8519164919853 MULTI CID FTMS 0 0 0 9714 328610.21875 0.709436852085208 1 -0.0208053588867187 1 Unmodified _LPRRPNDIYV_ ENSG00000172336|ENST00000303151|POP7 27.088373467376528 0.3600710273140457 4 {I|L}YV 3 7 28.232 0.0 0.0 2.2737 0.0 0.0 848.4626596744507 0.0 848.4626596744507 0.0 17.26280941356464 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {I|L}YV 2.2737 + + 23 1 1.679 104620.2 1.0 5097 4616 9714 HBL1_DMSO_200M_050219_2,9715 HBL1_DMSO_200M_050219_2,9715,LPRRPNDIYV False True LPRRPNDIYV 52.856597 621.851916491985 5576216.5 9714.0 ENSG00000172336|ENST00000303151|POP7 3.6975348790486655 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9716 52.87 800.0 162650.0 25 0 16513.0 -1 NWNCKMNQFY 10 134 710.7915590464806 1419.5685651597612 2 711.2934448122978 MULTI CID FTMS 0 0 0 9714 176067.125 0.726104925720541 3 -0.1850662231445312 2 Carbamidomethyl (C),Oxidation (M) _NWNC(Carbamidomethyl (C))KM(Oxidation (M))NQFY_ ENST00000244230.6_1_2:71360149-71360302:+|nuORF 7.289230182591677 0.6929195370588109 4 [AG]N{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y 13 -1 + 74.365 0.0 0.0 5.2386 5.2386 71.31 0.0 0.0 0.0 1.972805581256196 8.764744776331483 1.972805581256196 1.3156931550731343 0 0.8182503180159344 1.0969100130080565 0.3807196863200844 1.7931576817365436 [AG]N{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;[AG]N{M(Oxidation (M))|F}C(Carbamidomethyl (C))TQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{M(Oxidation (M))|F}C(Carbamidomethyl (C))TQQNA{M(Oxidation (M))|F}Y;[AG]GG{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;[AG]GG{M(Oxidation (M))|F}C(Carbamidomethyl (C))TQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[CS]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}C(Carbamidomethyl (C))TQQNA{M(Oxidation (M))|F}Y;[AG]N{M(Oxidation (M))|F}[CS]AQQGGA{M(Oxidation (M))|F}Y;[AG]N{M(Oxidation (M))|F}[CS]AQ[AG]NA{M(Oxidation (M))|F}Y 5.2386;5.1459;5.0996;5.0069;4.967;4.8725;4.8475;4.757;4.5995;4.5995 -;-;-;-;-;-;-;-;-;- 2769 1 1.679 98927.4 0.9100000262260436 5098 4616 9714 HBL1_DMSO_200M_050219_2,9716 HBL1_DMSO_200M_050219_2,9716,NWNCKMNQFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9718 52.875 65.0 830220.0 25 0 68861.0 + 10096 FPTSQRLPA 9 92 508.77910317956525 1015.5436534259304 2 508.7802917361259 MULTI CID FTMS 0 0 0 9717 582862.625 0.6292647661738513 9 -0.7982597351074219 1 Unmodified _FPTSQRLPA_ ENST00000399831.7_1_8:38965091-38975631:+|nuORF 18.1463463914782 0.3454829746528889 4 RAGTPE 6 8 50.636 0.0 0.0 4.9861 0.0 0.0 386.21714980293126 0.0 386.21714980293126 0.0 35.687587626244124 0.0 0.0 0 0.7742275032520141 0.0 0.3252574989159953 0.0 RAGTPE 4.9861 - 140 1 1.678 52126.3 1.0 5099 4617 9717 HBL1_DMSO_200M_050219_2,9718 HBL1_DMSO_200M_050219_2,9718,FPTSQRLPA False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9719 52.877 45.0 1784200.0 25 0 156400.0 + 43062 VYIDKVRSL 9 83 364.885595889924 1091.634958269972 3 364.8854858279228 MULTI CID FTMS 0 0 0 9717 975289.625 0.1907828626145335 -2 0.0359306335449218 2 Unmodified _VYIDKVRSL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 23.78978130925829 0.2284941198415988 4 VY{I|L}DKV 6 3 60.851 0.0 0.0 5.5743 0.0 0.0 0.0 371.2052096002563 371.2052096002563 39.373212897245295 0.0 0.0 0.0 0 0.2614393726401688 1.5228787452803376 0.4247425010840047 0.0 + VY{I|L}DKV 5.5743 + + 134 + 1 1.678 79177.0 1.0 5100 4617 9717 HBL1_DMSO_200M_050219_2,9719 HBL1_DMSO_200M_050219_2,9719,VYIDKVRSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9720 52.879 80.0 686510.0 25 0 78350.0 + 21961 LPPMDHSTI 9 84 505.7526348088312 1009.4907166844624 2 505.7528564333916 MULTI CID FTMS 0 0 0 9717 765453.4375 0.7695443835394196 7 -0.6332664489746094 3 Unmodified _LPPMDHSTI_ ENSG00000064666|ENST00000263097|CNN2;nc|ENSG00000064666|Q99439-2|CNN2 48.345845343767074 0.0439967357579942 4 {I|L}P{NN|[MP]|[D{I|L}]|[EV]}D[HS]T{I|L} 9 0 + 51.678 0.0 0.0 5.1192 5.1192 84.2 0.0 0.0 0.0 18.47173404049734 6.4613685516224 6.4613685516224 12.684917831265842 0 0.805462187404089 2.0 0.7302046884880937 0.0 + + {I|L}P{NN|[MP]|[D{I|L}]|[EV]}D[HS]T{I|L};{[MG]|[TS]}[YE]ST{I|L}P{I|L};{[MG]|[TS]}[YT]DT{I|L}P{I|L};[{I|L}P]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[YN]P{I|L} 5.1192;3.8626;3.39;2.4104 +;-;-;- + 130 + 1 1.678 46852.9 1.0 5101 4617 9717 HBL1_DMSO_200M_050219_2,9720 HBL1_DMSO_200M_050219_2,9720,LPPMDHSTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9721 52.88 71.0 858150.0 25 0 62008.0 + 26645 NYETMGRAL 9 86 527.7536355443693 1053.4927181555386 2 527.7539550662041 MULTI CID FTMS 0 0 0 9717 530443.25 0.7988743025809751 -2 0.0359306335449218 4 Unmodified _NYETMGRAL_ ENSG00000102034|ENST00000308167|ELF4;ENSG00000109381|ENST00000686138|ELF2;ENSG00000120690|ENST00000239882|ELF1;ENST00000404600.2_1_6:1514778-1515111:-|nuORF;nc|ENSG00000109381|Q15723-1|ELF2;nc|ENSG00000109381|Q15723-2|ELF2;nc|ENSG00000109381|Q15723-3|ELF2;nc|ENSG00000109381|Q15723-4|ELF2;nc|ENSG00000120690|P32519-2|ELF1 49.93300154707207 0.0405168250806675 4 [YN]ETM{[NV]|[RG]}A{I|L} 9 0 + 55.762 0.0 0.0 5.293 5.293 75.114 0.0 0.0 0.0 41.73789571796792 0.800855193405674 0.800855193405674 3.053948010664307 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + + [YN]ETM{[NV]|[RG]}A{I|L};[YN]ETV[C(Carbamidomethyl (C))R]{I|L};[YN][R{I|L}]TE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]E[K{I|L}]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN][R{I|L}]TM{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[YN]E[K{I|L}]M{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[YE]N[K{I|L}]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN][R{I|L}][DP][YN];[YE]GG[K{I|L}]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}MTM{[NV]|[RG]}A{I|L} 5.293;5.0031;4.6175;4.2027;3.9503;3.5355;3.019;2.5059;2.1398;1.8496 +;-;-;-;-;-;-;-;-;- + 251 + 1 1.678 52394.8 1.0 5102 4617 9717 HBL1_DMSO_200M_050219_2,9721 HBL1_DMSO_200M_050219_2,9721,NYETMGRAL True True NYETMGRAL 52.880182 527.753955066204 5452914.5 9717.0 nc|ENSG00000109381|Q15723-3|ELF2;;nc|ENSG00000120690|P32519-2|ELF1;;nc|ENSG00000109381|Q15723-2|ELF2;;ENST00000404600.2_1_6:1514778-1515111:-|nuORF;;nc|ENSG00000109381|Q15723-4|ELF2;;nc|ENSG00000109381|Q15723-1|ELF2;;ENSG00000102034|ENST00000308167|ELF4;;ENSG00000109381|ENST00000686138|ELF2;;ENSG00000120690|ENST00000239882|ELF1 6.238741556803386 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9722 52.882 82.0 495940.0 25 0 56043.0 + 19479 LFHNAVSAY 9 73 511.2582010104483 1020.5018490876968 2 511.2586852908134 MULTI CID FTMS 0 0 0 9717 402510.40625 0.812135013703163 1 -0.078887939453125 5 Unmodified _LFHNAVSAY_ ENSG00000132254|ENST00000396777|ARFIP2;nc|ENSG00000132254|P53365-2|ARFIP2;nc|ENSG00000132254|P53365-3|ARFIP2 26.88365393820708 0.1891292719743517 4 NAVSAY 6 3 31.063 0.0 0.0 3.0439 0.0 0.0 397.2126026837906 0.0 397.2126026837906 0.0 15.578278345927217 0.0 0.0 0 0.8182503180159344 0.0 0.5 0.0 + NAVSAY 3.0439 + + 53 1 1.678 36366.7 1.0 5103 4617 9717 HBL1_DMSO_200M_050219_2,9722 HBL1_DMSO_200M_050219_2,9722,LFHNAVSAY False True LFHNAVSAY 52.882045 511.258685290813 3637218.25 9717.0 nc|ENSG00000132254|P53365-3|ARFIP2;;ENSG00000132254|ENST00000396777|ARFIP2;;nc|ENSG00000132254|P53365-2|ARFIP2 5.909534931182861 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9723 52.887 285.0 447860.0 25 0 51703.0 + + 35185 GVKEKFTMV 9 144 518.2831982781872 1034.5518436231744 2 519.7871581912041 MULTI CID FTMS 0 0 0 9717 319104.4375 0.800924369576529 1 -0.078887939453125 6 Unmodified _SSARTTVKW_ nc|ENSG00000114573|P38606-2|ATP6V1A;ENSG00000114573|ENST00000273398|ATP6V1A 19.256988751693697 0.3154191944385105 4 [VG]T{M(Oxidation (M))|F}KRR 7 -1 35.385 0.0 0.0 3.4203 0.0 0.0 0.0 187.04652518054425 187.04652518054425 18.390172891584417 0.0 0.0 0.0 0 0.0 2.0 1.524227503252014 0.0 [VG]T{M(Oxidation (M))|F}KRR 3.4203 - 2381 1 1.678 100319.6 1.0 5104 4617 9717 HBL1_DMSO_200M_050219_2,9723 HBL1_DMSO_200M_050219_2,9723,SSARTTVKW False False GVKEKFTMV 52.887297 519.787158191204 3527509.5 9717.0 nc|ENSG00000114573|P38606-2|ATP6V1A;;ENSG00000114573|ENST00000273398|ATP6V1A 6.600406010945638 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9724 52.893 320.0 483530.0 25 0 95878.0 + 29839 QQLQQQHLL 9 137 568.3145087958275 1134.6144646584548 2 568.3158447146416 MULTI CID FTMS 0 0 0 9717 229890.640625 0.5468216112151756 -1 0.0208053588867187 7 Unmodified _QQLQQQHLL_ ENSG00000114861|ENST00000649528|FOXP1;ENSG00000137166|ENST00000307972|FOXP4;nc|ENSG00000137166|Q8IVH2-2|FOXP4;nc|ENSG00000137166|Q8IVH2-3|FOXP4;nc|ENSG00000285708|Q9H334-3|FOXP1;nc|ENSG00000285708|Q9H334-4|FOXP1;nc|ENSG00000285708|Q9H334-6|FOXP1;nc|ENSG00000285708|Q9H334-7|FOXP1;nc|ENSG00000285708|Q9H334-8|FOXP1 74.42276476219924 0.019389277360085 4 [AG]QHRADH{I|L} 9 7 45.26 0.0 0.0 3.9891 0.0 0.0 0.0 146.08264790946774 146.08264790946774 13.156300992696243 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.805462187404089 [AG]QHRADH{I|L} 3.9891 - 3940 1 1.678 120328.9 1.0 5105 4617 9717 HBL1_DMSO_200M_050219_2,9724 HBL1_DMSO_200M_050219_2,9724,QQLQQQHLL True True QQLQQQHLL 52.893122 568.3139 3518525.5 9717.0 nc|ENSG00000137166|Q8IVH2-2|FOXP4;;nc|ENSG00000137166|Q8IVH2-3|FOXP4;;nc|ENSG00000285708|Q9H334-7|FOXP1;;nc|ENSG00000285708|Q9H334-6|FOXP1;;ENSG00000114861|ENST00000649528|FOXP1;;nc|ENSG00000285708|Q9H334-8|FOXP1;;nc|ENSG00000285708|Q9H334-3|FOXP1;;nc|ENSG00000285708|Q9H334-4|FOXP1;;ENSG00000137166|ENST00000307972|FOXP4 6.893574873606364 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9725 52.899 337.0 450610.0 25 0 49616.0 -1 LPPPPPPAM 9 139 466.7492656597461 0 466.7493774294853 PEAK CID FTMS 0 0 0 9717 201586.703125 0.7920523954037745 1 -0.078887939453125 8 Oxidation (M) _LPPPPPPAM(Oxidation (M))_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 79.93452657146344 0.0144931966243808 4 PPPA 4 -1 15.063 0.0 0.0 1.6171 0.0 0.0 404.2420916412608 162.02350794010002 566.2655995813608 0.0 0.0 0.0 0.0 0 1.0114393726401687 0.0 0.0 0.0 PPPA 1.6171 + + 346 + 1 1.678 118786.3 1.0 5106 4617 9717 HBL1_DMSO_200M_050219_2,9725 HBL1_DMSO_200M_050219_2,9725,LPPPPPPAM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9726 52.913 800.0 130080.0 25 0 24840.0 -1 0 53 1076.1100292459237 3225.308258337971 3 1076.780078113079 MULTI CID FTMS 0 0 0 9717 172068.71875 0.6145903338680947 -2 0.0359306335449218 9 4 GYCTV{I|L}S 7 -1 20.614 0.0 0.0 0.63912 0.0 0.0 1944.6713399919208 554.2616671197874 2498.933007111708 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 GYCTV{I|L}S 0.63912 - 71 + 1 1.678 91107.9 0.6499999761581421 5107 4617 9717 HBL1_DMSO_200M_050219_2,9726 HBL1_DMSO_200M_050219_2,9726, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9727 52.922 483.0 348790.0 25 0 18083.0 + -1 SLKEACKKI 9 229 359.54216894291795 1075.604677428954 3 359.5452148318291 MULTI CID FTMS 0 0 0 9717 145340.609375 0.0606757103216636 -5 0.3181648254394531 10 Carbamidomethyl (C) _SLKEAC(Carbamidomethyl (C))KKI_ REV__ENSG00000079805|ENST00000389253|DNM2;REV__nc|ENSG00000079805|P50570-3|DNM2 11.494710602746466 0.5255349189887087 4 {[QG]|[NA]}{M(Oxidation (M))|F}{I|L}RNKT{I|L} 9 -1 + 30.446 0.0 0.0 2.8306 2.8306 63.491 0.0 0.0 0.0 12.064083326475131 6.555906640182407 6.555906640182407 1.4215905896025305 0 0.3182503180159344 1.6989700043360187 0.3494850021680094 0.0 {[QG]|[NA]}{M(Oxidation (M))|F}{I|L}RNKT{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}KAAKT{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}RNK{I|L}T;{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}KAAK{I|L}T;{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[R{I|L}][VP];{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[RV]P{I|L} 2.8306;2.6984;2.2211;2.0889;1.0738;0.63023 -;-;-;-;-;- 1086 + 1 1.678 132753.4 1.0 5108 4617 9717 HBL1_DMSO_200M_050219_2,9727 HBL1_DMSO_200M_050219_2,9727,SLKEACKKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9728 52.935 800.0 44250.0 25 0 10785.0 -1 0 31 1160.835624994532 3479.4850455837964 3 1161.504199206829 MULTI CID FTMS 0 0 0 9717 100149.203125 0.3961381293028974 4 -0.3659477233886719 11 4 E 1 -1 5.4846 0.0 0.0 0.15763 0.0 0.0 2823.2559697520924 524.1637667291624 3347.419736481255 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15763 - 10 + 1 1.678 37865.2 0.5 5109 4617 9717 HBL1_DMSO_200M_050219_2,9728 HBL1_DMSO_200M_050219_2,9728, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9729 52.949 800.0 149190.0 25 0 5943.1 -1 NQVMLQMTESH 11 130 675.296665626049 1348.578778318898 2 675.2961303591728 MULTI CID FTMS 0 0 0 9717 104112.890625 0.3751697581607787 -2 0.0359306335449218 12 2 Oxidation (M) _NQVM(Oxidation (M))LQM(Oxidation (M))TESH_ ENST00000471947.1_1_2:55633152-55646215:-|nuORF 12.240655878213236 0.7805268987462184 4 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS} 14 -1 + 64.93 0.0 0.0 4.8147 4.8147 74.121 0.0 0.0 0.0 3.780598309681821 0.9275405323689796 0.9275405323689796 3.780598309681821 0 0.5 1.3010299956639813 0.0 1.9049471895720984 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS};{[QN]|[E{I|L}]|[KN]}A{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS};{[QG]|[NA]}G{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[CP]|[EA]}QQNA{[CA]|SS};[AG]NA{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS};{[QG]|[NA]}GA{[CA]|SS}EVQQNA{[CA]|SS};[AG]GQ{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[CP]|[EA]}QQNA{[CA]|SS};[AG]N{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[CP]|[EA]}QQNA{[CA]|SS};[AG]GGA{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS} 4.8147;4.5344;4.5076;4.4988;4.4329;4.3431;4.2576;4.2291;4.1917;4.1408 -;-;-;-;-;-;-;-;-;- 1327 1 1.678 88721.7 0.7099999785423279 5110 4617 9717 HBL1_DMSO_200M_050219_2,9729 HBL1_DMSO_200M_050219_2,9729,NQVMLQMTESH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9731 52.955 155.0 419670.0 25 0 37747.0 + 11645 GLATDVQTV 9 105 452.2428553565603 902.4711577799206 2 452.2429382205009 MULTI CID FTMS 0 0 0 9730 359620.28125 0.4186934830966842 2 -0.1767349243164062 1 Unmodified _GLATDVQTV_ ENSG00000277791|ENST00000619426|PSMB3 23.1484247019978 0.2366544122328345 4 {[VA]|[{I|L}G]}GT[{I|L}A]S{M(Oxidation (M))|F} 8 6 39.87 0.0 0.0 4.4179 0.0 0.0 0.0 153.0430931649394 153.0430931649394 23.58857830256703 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.0 {[VA]|[{I|L}G]}GT[{I|L}A]S{M(Oxidation (M))|F} 4.4179 - 763 1 1.678 55579.0 1.0 5111 4618 9730 HBL1_DMSO_200M_050219_2,9731 HBL1_DMSO_200M_050219_2,9731,GLATDVQTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9732 52.958 177.0 358820.0 25 0 39856.0 + 987 AFSDRAEEF 9 97 536.2408427818899 1070.4671326305795 2 536.2407104372978 MULTI CID FTMS 0 0 0 9730 263278.9375 0.442900223402412 4 -0.3751373291015625 2 Unmodified _AFSDRAEEF_ ENSG00000117450|ENST00000319248|PRDX1 36.506200033944 0.094635877243972 4 A{M(Oxidation (M))|F}SDD 5 5 32.307 0.0 0.0 3.018 0.0 0.0 0.0 532.2618502252561 532.2618502252561 0.191643401200281 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 A{M(Oxidation (M))|F}SDD 3.018 - 182 + 1 1.678 54300.1 1.0 5112 4618 9730 HBL1_DMSO_200M_050219_2,9732 HBL1_DMSO_200M_050219_2,9732,AFSDRAEEF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9733 52.959 28.0 2569800.0 25 0 308730.0 + 38641 TTIKAFFPKK 10 84 394.2414100849522 1179.7024008550568 3 394.2412902712822 MULTI CID FTMS 0 0 0 9730 1838128.875 0.0979703164890923 -2 0.0996932983398437 3 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 39.94969957227396 0.1580982266129622 4 TT{I|L}KY{I|L}WKK 9 4 + 90.826 0.0 0.0 7.699 7.699 90.012 0.0 0.0 0.0 67.18047529268127 17.230749808046326 17.230749808046326 9.018637558036673 0 0.6747425010840047 1.3979400086720375 0.0 0.8494850021680094 TT{I|L}KY{I|L}WKK;TTK{I|L}Y{I|L}WKK 7.699;6.9345 -;- 206 + 1 1.678 61287.6 1.0 5113 4618 9730 HBL1_DMSO_200M_050219_2,9733 HBL1_DMSO_200M_050219_2,9733,TTIKAFFPKK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9734 52.962 116.0 968690.0 25 0 115840.0 + + 21156 LPASLRTV 8 93 428.76628081772 855.5180087022401 2 428.7663146853447 MULTI CID FTMS 0 0 0 9730 683908.375 0.9154244163784876 -1 0.078887939453125 4 Unmodified _LPASLSIR_ ENSG00000117616|ENST00000243189|RSRP1;nc|ENSG00000117616|Q9BUV0-3|RSRP1;nc|ENSG00000117616|Q9BUV0-2|RSRP1 29.081581746732265 0.4323690340403521 4 {I|L}PAS{I|L} 5 -1 55.455 0.0 0.0 6.482 0.0 0.0 0.0 371.20478235416255 371.20478235416255 35.78922264747948 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.4247425010840047 0.0 {I|L}PAS{I|L} 6.482 + + 49 + 1 1.678 89146.0 1.0 5114 4618 9730 HBL1_DMSO_200M_050219_2,9734 HBL1_DMSO_200M_050219_2,9734,LPASLSIR False False LPASLRTV 52.961553 428.766314685345 5711018.0 9730.0 ENSG00000117616|ENST00000243189|RSRP1;;nc|ENSG00000117616|Q9BUV0-3|RSRP1;;nc|ENSG00000117616|Q9BUV0-2|RSRP1 1.6334108014901478 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9735 52.963 87.0 636850.0 25 0 68666.0 + 10963 GAMETLRPV 9 87 487.26011600831646 972.5056790834328 2 487.2602111697197 MULTI CID FTMS 0 0 0 9730 606139.1875 1.0 0 0.0 5 Unmodified _GAMETLRPV_ ENST00000320330.7_1_16:29827739-29827916:+|nuORF 36.12702656103203 0.0967173616627612 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ET{I|L}RPV 8 2 + 48.744 0.0 0.0 5.0122 5.0122 85.678 0.0 0.0 0.0 37.774979200736176 4.64565336747345 4.64565336747345 24.771212547196622 0 0.75 0.0 0.4247425010840047 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ET{I|L}RPV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[{I|L}T]ERPV;[YN][DP]{I|L}RPV;[{I|L}T]R{I|L}[DP]C(Carbamidomethyl (C))V;[{I|L}T][C(Carbamidomethyl (C))D]{I|L}RPV;[{I|L}T]R{I|L}[C(Carbamidomethyl (C))D]PV;[YN][VP]ERPV;[{I|L}T]RE[VP]C(Carbamidomethyl (C))V;[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ERPV;[{I|L}T]RE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PV 5.0122;2.4651;2.3129;2.1903;1.8762;1.7535;1.3843;1.2617;0.94757;0.8249 -;-;-;-;-;-;-;-;-;- 103 + 1 1.678 48809.1 1.0 5115 4618 9730 HBL1_DMSO_200M_050219_2,9735 HBL1_DMSO_200M_050219_2,9735,GAMETLRPV True True GAMETLRPV 52.96348 487.26021116972 4480323.0 9730.0 ENST00000320330.7_1_16:29827739-29827916:+|nuORF 5.605863173802693 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9736 52.966 129.0 531190.0 25 0 38641.0 12999 HALVRGAFG 9 81 309.84394138994986 926.5099947700496 3 309.8434936404228 MULTI CID FTMS 0 0 0 9730 299125.875 0.5426231751571374 -2 0.0996932983398437 6 Unmodified _HALVRGAFG_ ENSG00000187950|ENST00000537054|OVCH1;nc|ENSG00000187950|Q7RTY7|OVCH1 7.910154910731844 0.6385446671287552 4 [HN]VGVV{M(Oxidation (M))|F}R 8 6 + 44.729 0.0 0.0 4.8277 4.8277 74.428 0.0 0.0 0.0 33.47036949533457 9.763582385535088 9.763582385535088 3.979400086720375 0 0.805462187404089 0.0 0.0 0.0 [HN]VGVV{M(Oxidation (M))|F}R;[HN]VGV{M(Oxidation (M))|F}VR 4.8277;4.3982 -;- 105 + 1 1.678 59711.8 1.0 5116 4618 9730 HBL1_DMSO_200M_050219_2,9736 HBL1_DMSO_200M_050219_2,9736,HALVRGAFG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9737 52.979 766.0 397730.0 25 0 39186.0 + 38645 TTIKAFFPKK 10 166 590.8583818750385 1179.702210816877 2 590.8588744997978 MULTI CID FTMS 0 0 0 9730 230699.421875 0.0908679175675854 -2 0.0996932983398437 7 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 67.83816525789305 0.0190062514522628 4 TT{I|L}KY{I|L}WKK 9 4 + 122.45 0.0 0.0 10.38 10.38 95.996 0.0 0.0 0.0 69.59306885192277 18.467874862246543 18.467874862246543 12.042425094393252 0 2.596065077845211 1.3010299956639813 0.3494850021680094 1.2638793319624575 TT{I|L}KY{I|L}WKK;TTK{I|L}Y{I|L}WKK;TT{I|L}K[RH]T[VP]K;{[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK;K{[DS]|[MA]|[CV]|TT}{I|L}Y{I|L}WKK;[{I|L}T]KTY{I|L}WKK;TTK{I|L}[RH]T[VP]K;[K{I|L}]TTY{I|L}WKK;TT{I|L}K[RH]{I|L}K[PS];{[DS]|[MA]|[CV]|TT}{I|L}KYW{I|L}KK 10.38;9.3588;6.4926;6.3614;6.0867;5.9331;5.6287;5.5212;5.5147;5.5126 -;-;-;-;-;-;-;-;-;- 11423 + 1 1.678 222134.6 1.0 5117 4618 9730 HBL1_DMSO_200M_050219_2,9737 HBL1_DMSO_200M_050219_2,9737,TTIKAFFPKK True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9738 52.993 800.0 300250.0 25 0 66296.0 + 45955 YYYDTHTNTYY 11 141 752.3067978498209 1502.5990427664417 2 752.3071777224541 MULTI CID FTMS 0 0 0 9730 230351.203125 0.3092442668739919 -2 0.0996932983398437 8 Unmodified _YYYDTHTNTYY_ ENSG00000064651|ENST00000262461|SLC12A2;nc|ENSG00000064651|P55011-3|SLC12A2 135.86342318000737 0.0451686713581953 4 YYQYNTYYYY 10 6 + 97.701 0.0 0.0 6.5021 6.5021 78.339 0.0 0.0 0.0 4.1997519836344 16.53212513775344 4.1997519836344 2.3901393152256816 0 1.1861818737241734 2.0 1.8494850021680087 0.0 YYQYNTYYYY;YYYQNTYYYY;YYYDTQT[HS]YY;YYQNTYYYYY;[YT][HD]TNTYYYY;YYYDTQTN{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y;YYQNYTYYYY;YY[AG]YNTYYYY;YYQYGGTYYYY;[YT][HS]ENTYYYY 6.5021;6.3431;6.2226;6.2224;6.1142;5.94;5.9397;5.8922;5.8922;5.8286 -;-;-;-;-;-;-;-;-;- 97446 1 1.678 168019.4 0.959999978542328 5118 4618 9730 HBL1_DMSO_200M_050219_2,9738 HBL1_DMSO_200M_050219_2,9738,YYYDTHTNTYY True True YYYDTHTNTYY 52.993225 752.307177722454 6064100.0 9730.0 ENSG00000064651|ENST00000262461|SLC12A2;;nc|ENSG00000064651|P55011-3|SLC12A2 7.695992151896159 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9739 53.007 800.0 147270.0 25 0 13862.0 + 32662 SDAPVTGMV 9 99 876.412386831092 875.405110364492 1 876.4133178591728 MULTI CID FTMS 0 0 0 9730 217037.84375 0.5760513571714307 5 -0.4296302795410156 9 Unmodified _SDAPVTGMV_ ENSG00000103365|ENST00000309859|GGA2 88.90359156742426 0.0153595091083554 4 [VP]TGDTGMV 9 5 + 88.686 0.0 0.0 10.131 10.131 95.102 0.0 0.0 0.0 24.13734275855269 68.61793917577556 24.13734275855269 9.771212547196626 0 0.7134679910804405 2.0 1.9489700043360187 0.0 [VP]TGDTGMV;[VP]TGSEGMV;[VP]ASDTGMV;[VP]ASSEGMV;[VP]TGD{[MS]|[{M(Oxidation (M))|F}A]}AV;{[TV]|[{I|L}S]}PGDTGMV;[VP]TGS[MD]AV;{[TV]|[{I|L}S]}PGSEGMV;[VP]ASD{[MS]|[{M(Oxidation (M))|F}A]}AV;[PA]VSDTGMV 10.131;9.0146;8.7567;7.6406;7.0421;6.8808;5.9259;5.7646;5.668;5.5435 -;-;-;-;-;-;-;-;-;- 1371 1 1.678 81378.7 0.8799999952316284 5119 4618 9730 HBL1_DMSO_200M_050219_2,9739 HBL1_DMSO_200M_050219_2,9739,SDAPVTGMV True True SDAPVTGMV 53.007073 876.413317859173 3512791.5 9730.0 ENSG00000103365|ENST00000309859|GGA2 8.107290903727213 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9740 53.021 800.0 267750.0 25 0 24069.0 + 44896 YPPPAPGI 8 230 406.2212944505399 810.4280359678799 2 406.2212402224541 MULTI CID FTMS 0 0 0 9730 191947.046875 0.6929893432520726 4 -0.3751373291015625 10 Unmodified _YPPPAPGI_ ENSG00000205352|ENST00000429243|PRR13;nc|ENSG00000205352|Q9NZ81-2|PRR13 64.08090720244739 0.1161809961245979 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PAPPG{I|L} 8 2 + 44.09 0.0 0.0 5.4404 5.4404 71.994 0.0 0.0 0.0 12.76679965628567 15.177287669604311 12.76679965628567 1.249387366082999 0 1.1237125054200234 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PAPPG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPAPG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KQ]Y{I|L};{[HG]|PP}APYPG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PP[QP]{I|L};{[HG]|PP}APGPY{I|L};{[HG]|PP}AYPPG{I|L};{[HG]|PP}YAPPG{I|L};{[HG]|PP}{I|L}{M(Oxidation (M))|F}APG{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SYPG{I|L} 5.4404;5.2862;4.4583;3.8651;3.6328;3.3395;3.2764;2.7853;2.7507;2.7373 -;+;-;-;-;-;-;-;-;- + 419 1 1.678 163501.3 0.8100000023841858 5120 4618 9730 HBL1_DMSO_200M_050219_2,9740 HBL1_DMSO_200M_050219_2,9740,YPPPAPGI True True YPPPAPGI 53.02089 406.221240222454 7795186.5 9730.0 nc|ENSG00000205352|Q9NZ81-2|PRR13;;ENSG00000205352|ENST00000429243|PRR13 4.712829271952312 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9741 53.035 800.0 51458.0 25 0 11480.0 -1 0 42 1033.10174265531 0 1033.103442370892 PEAK CID FTMS 0 0 0 9730 122690.6875 1.0 0 0.0 11 4 E 1 -1 5.4846 0.0 0.0 0.2657 0.0 0.0 1407.9619559143323 524.1630343072874 1932.12499022162 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.2657 - 6 + 1 1.678 43895.1 0.6200000047683716 5121 4618 9730 HBL1_DMSO_200M_050219_2,9741 HBL1_DMSO_200M_050219_2,9741, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9743 53.039 4.9 12301000.0 25 0 1908900.0 -1 LMLRHGWR 8 57 542.7934218667502 1083.5722908003004 2 542.7933227419853 MULTI CID FTMS 0 0 0 9742 11207202.0 0.605024196212823 7 -0.6339988708496094 1 Oxidation (M) _LM(Oxidation (M))LRHGWR_ ENSG00000168268|ENST00000422318|NT5DC2;nc|ENSG00000168268|Q9H857-3|NT5DC2;nc|ENSG00000168268|Q9H857-4|NT5DC2;nc|ENSG00000168268|Q9H857|NT5DC2 14.581692164780916 0.6954967302934248 4 YPP 3 -1 50.445 0.0 0.0 4.6555 0.0 0.0 0.0 723.3807432076444 723.3807432076444 38.762874945799766 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPP 4.6555 - 20 + 1 1.675 54790.8 1.0 5122 4619 9742 HBL1_DMSO_200M_050219_2,9743 HBL1_DMSO_200M_050219_2,9743,LMLRHGWR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9744 53.04 6.6 9300200.0 25 0 2403200.0 + 15408 IPPDQQRLI 9 58 540.3146414642733 1078.6147299953466 2 540.3148681521416 MULTI CID FTMS 0 0 0 9742 9138766.0 0.3695323361406217 10 -0.9069976806640624 2 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 13.042465956692816 0.4836390050082244 4 {I|L}PPD 4 5 56.186 0.0 0.0 5.2091 0.0 0.0 0.0 653.3747127059958 653.3747127059958 45.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPD 5.2091 + + 15 + 1 1.675 54820.0 1.0 5123 4619 9742 HBL1_DMSO_200M_050219_2,9744 HBL1_DMSO_200M_050219_2,9744,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9745 53.041 4.3 19342000.0 25 0 1440200.0 + 4963 DGPRVFRV 8 84 315.8473737245311 944.5202917737934 3 315.8471557497978 MULTI CID FTMS 0 0 0 9742 12984532.0 1.0 0 0.0 3 Unmodified _DGPRVFRV_ ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF;nc|ENSG00000179115|Q9Y285-2|FARSA 28.486842064014134 0.4448922141344407 4 DGVPR{M(Oxidation (M))|F}VR 8 4 + 82.588 0.0 0.0 8.7439 8.7439 79.59 0.0 0.0 0.0 30.0 1.383026981662809 1.383026981662809 0.2422750325201406 0 0.3252574989159953 2.0 0.0 0.75 DGVPR{M(Oxidation (M))|F}VR;DGVPRV{M(Oxidation (M))|F}R;DGVPR{M(Oxidation (M))|F}RV;DG[RP]V{M(Oxidation (M))|F}VR;DG[RP]VV{M(Oxidation (M))|F}R;DG[RP]V{M(Oxidation (M))|F}RV;DRPGV{M(Oxidation (M))|F}VR;DRPGVV{M(Oxidation (M))|F}R;DRPGV{M(Oxidation (M))|F}RV;DVGPR{M(Oxidation (M))|F}VR 8.7439;8.7182;8.5975;6.6277;6.6021;6.4813;6.282;6.2564;6.1356;5.9633 -;-;-;-;-;+;-;-;-;- + 189 + 1 1.675 72101.6 1.0 5124 4619 9742 HBL1_DMSO_200M_050219_2,9745 HBL1_DMSO_200M_050219_2,9745,DGPRVFRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9746 53.043 16.0 2741600.0 25 0 217840.0 + 41604 VPPLATNTV 9 79 456.2635930417542 910.5126331503084 2 456.2637206912041 MULTI CID FTMS 0 0 0 9742 3139935.75 0.4804766410506678 8 -0.7238121032714844 4 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 39.957323273325 0.0756908302845263 4 [VP]P{I|L}ATNTV 9 0 + 67.305 0.0 0.0 7.392 7.392 84.769 0.0 0.0 0.0 4.3539963087460265 16.478174818886373 4.3539963087460265 4.3539963087460265 0 0.7742275032520141 2.0 0.0 0.0 + + [VP]P{I|L}ATNTV;[{I|L}P]PATNVTV;[VP]PA{I|L}TNTV;[{I|L}P]PAVTNTV;[{I|L}P]APTNVTV;[VP][VS]PNVTV;[{I|L}P]PATVNTV;[{I|L}P]APVTNTV;[{I|L}P]PVATNTV;[{I|L}P]APTVNTV 7.392;6.9138;6.7308;6.7234;6.7204;6.6227;6.5832;6.53;6.3928;6.3898 +;-;-;-;-;-;-;-;-;- + 587 1 1.675 38799.3 1.0 5125 4619 9742 HBL1_DMSO_200M_050219_2,9746 HBL1_DMSO_200M_050219_2,9746,VPPLATNTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9747 53.044 34.0 1657000.0 25 0 106060.0 + 28625 PVGLSGPGASV 11 92 470.7594528355005 939.5043527378008 2 470.7610656619072 MULTI CID FTMS 0 0 0 9742 1264645.125 0.6029091856940276 3 -0.289764404296875 5 Unmodified _PVGLSGPGASV_ REV__ENST00000320330.7_1_16:29827508-29827685:+|nuORF 22.736283301280096 0.5583477779825423 4 QVSGAW 6 -1 32.396 0.0 0.0 3.4482 0.0 0.0 293.17427260566564 0.0 293.17427260566564 0.0 9.916440611282624 0.0 0.0 0 0.3935078169319297 0.0 0.3054621874040891 0.0 QVSGAW 3.4482 - 278 1 1.675 49939.9 1.0 5126 4619 9742 HBL1_DMSO_200M_050219_2,9747 HBL1_DMSO_200M_050219_2,9747,PVGLSGPGASV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9748 53.046 80.0 864550.0 25 0 111410.0 + 12130 GQIVAIKQV 9 112 478.3003390396752 954.5861251461504 2 478.3004943728447 MULTI CID FTMS 0 0 0 9742 760675.9375 1.0 0 0.0 6 Unmodified _GQIVAIKQV_ ENSG00000101109|ENST00000372806|STK4;nc|ENSG00000101109|Q13043-2|STK4 78.14939416004806 0.0179651292570206 4 {[QG]|[NA]}{I|L}VA{I|L}KQV 9 0 + 68.855 0.0 0.0 7.213 7.213 88.689 0.0 0.0 0.0 12.523662736202944 8.899710790007617 8.899710790007617 8.899710790007617 0 1.5 0.5376020021010439 0.0 0.9049471895720984 + + {[QG]|[NA]}{I|L}VA{I|L}KQV;{[QG]|[NA]}{I|L}VA{I|L}KN{I|L};{[QG]|[NA]}{I|L}VA{I|L}K[AG]V;{[QG]|[NA]}{I|L}VA{I|L}KGG{I|L};{[QG]|[NA]}{I|L}[K{I|L}]{I|L}GQV;[AG]G{I|L}[K{I|L}]{I|L}GQV;[{I|L}V]AKQ{I|L}GQV;[K{I|L}]AGAV{I|L}GQV;[AG]VA[K{I|L}]{I|L}GQV;[K{I|L}]AQV{I|L}GQV 7.213;6.2807;5.9284;4.9961;4.976;4.3192;3.9431;3.1662;3.0632;3.0264 +;-;-;-;-;-;-;-;-;- + 570 + 1 1.675 58034.5 1.0 5127 4619 9742 HBL1_DMSO_200M_050219_2,9748 HBL1_DMSO_200M_050219_2,9748,GQIVAIKQV True True GQIVAIKQV 53.045588 478.300494372845 5177706.5 9742.0 nc|ENSG00000101109|Q13043-2|STK4;;ENSG00000101109|ENST00000372806|STK4 5.936886469523112 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9749 53.047 66.0 1179300.0 25 0 440620.0 -1 0 77 336.20194053634265 335.19466406974266 1 336.2016784548759 MULTI CID FTMS 0 0 0 9742 742273.875 1.0 0 0.0 7 4 {M(Oxidation (M))|F} 1 -1 11.783 0.0 0.0 3.5152 0.0 0.0 170.11574363692858 0.0 170.11574363692858 0.0 1.2981865525287797 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 3.5152 - 12 + 1 1.675 67181.8 1.0 5128 4619 9742 HBL1_DMSO_200M_050219_2,9749 HBL1_DMSO_200M_050219_2,9749, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9750 53.049 80.0 621880.0 25 0 140130.0 + + 38155 VPRGEIEVV 9 68 499.2883244518629 996.5620959705258 2 499.2883483767509 MULTI CID FTMS 0 0 0 9742 691431.5625 0.5449272028537624 2 -0.2016868591308593 8 Unmodified _TPPLWSVVV_ ENSG00000241945|ENST00000291576|PWP2 16.942295170755138 0.3780752226737986 4 {I|L}EVV 4 -1 38.175 0.0 0.0 3.8307 0.0 0.0 538.2891712873062 0.0 538.2891712873062 0.0 23.28077541642748 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}EVV 3.8307 - 44 1 1.675 41114.4 1.0 5129 4619 9742 HBL1_DMSO_200M_050219_2,9750 HBL1_DMSO_200M_050219_2,9750,TPPLWSVVV False False VPRGEIEVV 53.048983 499.288348376751 25882114.0 9742.0 ENSG00000241945|ENST00000291576|PWP2 3.19197682539622 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9751 53.051 73.0 809330.0 25 0 97635.0 + 45792 YYLNEQGDRVY 11 56 710.3301641461446 1418.6457753590892 2 710.3312255740166 MULTI CID FTMS 0 0 0 9742 558075.125 0.2441277784388074 -2 0.1642608642578125 9 Unmodified _YYLNEQGDRVY_ ENSG00000182117|ENST00000328848|NOP10 53.31671820480216 0.0992620867501809 4 YY{I|L}NEQ[DG]RVY 11 0 + 95.081 0.0 0.0 6.7022 6.7022 94.097 0.0 0.0 0.0 67.12199193218683 10.567435590381066 10.567435590381066 95.08079210562758 0 1.1237125054200234 2.0 0.4247425010840047 0.7614393726401688 + + YY{I|L}NEQ[DG]RVY 6.7022 + + 95 + 1 1.675 48600.5 1.0 5130 4619 9742 HBL1_DMSO_200M_050219_2,9751 HBL1_DMSO_200M_050219_2,9751,YYLNEQGDRVY True True YYLNEQGDRVY 53.050698 710.331225574017 33438594.0 9742.0 ENSG00000182117|ENST00000328848|NOP10 9.0863356590271 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9752 53.054 146.0 400630.0 25 0 26813.0 29206 QGIQLKSV 8 85 436.7636199678484 871.5126870024968 2 436.7641479372978 MULTI CID FTMS 0 0 0 9742 502263.625 0.2885209751859305 3 -0.289764404296875 10 Unmodified _QGIQLKSV_ ENSG00000106299|ENST00000223023|WASL 30.22481116460888 0.4082965392918993 4 SV 2 6 18.812 0.0 0.0 2.1586 0.0 0.0 667.4011280198781 0.0 667.4011280198781 0.0 7.905907858888529 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 + SV 2.1586 + + 129 + 1 1.675 49019.1 1.0 5131 4619 9742 HBL1_DMSO_200M_050219_2,9752 HBL1_DMSO_200M_050219_2,9752,QGIQLKSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9753 53.057 146.0 490230.0 25 0 45833.0 + + 22314 LPSGVTRVV 9 102 464.2847037480056 926.5548545628112 2 464.2847778201103 MULTI CID FTMS 0 0 0 9742 397964.3125 0.6068843131689503 4 -0.3442573547363281 11 Unmodified _LPSGTRIAI_ ENSG00000181418|ENST00000421952|DDN 21.53697664764585 0.2571576504437394 4 {I|L}PSGV 5 -1 61.643 0.0 0.0 6.6529 0.0 0.0 0.0 470.2733553522094 470.2733553522094 42.02151145223672 0.0 0.0 0.0 0 0.6694451763165201 2.0 0.0 0.0 {I|L}PSGV 6.6529 - 184 + 1 1.675 58044.2 1.0 5132 4619 9742 HBL1_DMSO_200M_050219_2,9753 HBL1_DMSO_200M_050219_2,9753,LPSGTRIAI False False LPSGVTRVV 53.056537 464.28477782011 10879555.0 9742.0 ENSG00000181418|ENST00000421952|DDN 2.868903160095215 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9754 53.067 590.0 332360.0 25 0 67717.0 + 45747 YYIPGQGRSTY 11 96 652.817578260381 1303.6206035875618 2 652.8192016482353 MULTI CID FTMS 0 0 0 9742 393442.25 0.4306268222751023 3 -0.289764404296875 12 Unmodified _YYIPGQGRSTY_ ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 37.07464296494664 0.257459615863268 4 YY{I|L}PGQS[WK]Y 10 4 + 93.276 0.0 0.0 7.1552 7.1552 89.175 0.0 0.0 0.0 79.78138143936619 6.690067809585756 6.690067809585756 9.164539485499262 0 0.805462187404089 2.0 0.3807196863200844 0.4247425010840047 YY{I|L}PGQS[WK]Y;YY{I|L}PG[AG]S[WK]Y;YY{I|L}PG{[WT]|[RM]}{[QN]|[E{I|L}]|[KN]}Y;YY{I|L}P[WQ][KS]GY;YY{I|L}Y[{M(Oxidation (M))|F}T][KS]GY;Y[RH]HQS[WK]Y 7.1552;6.4522;5.2995;4.7026;4.4902;2.4458 -;-;-;-;-;- 465 + 1 1.675 145266.2 1.0 5133 4619 9742 HBL1_DMSO_200M_050219_2,9754 HBL1_DMSO_200M_050219_2,9754,YYIPGQGRSTY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9755 53.072 261.0 570240.0 25 0 42657.0 + 4159 DAPHPPLKI 9 148 329.85914441787924 986.5556038538376 3 329.8590881228447 MULTI CID FTMS 0 0 0 9742 334339.875 0.0087374734261435 -23 1.8791542053222656 13 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 18.1463463914782 0.3454829746528889 4 {[DA]|[EG]}PHPP{I|L}K{I|L} 9 0 + 50.554 0.0 0.0 5.1243 5.1243 74.002 0.0 0.0 0.0 17.37889799077604 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.2742275032520141 2.0 0.0 0.2059771852360797 + + {[DA]|[EG]}PHPP{I|L}K{I|L};{[DA]|[EG]}PHPP{I|L}{I|L}K;W{I|L}{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}K{I|L};{[DA]|[EG]}[KQ]{[RE]|[WV]}K{I|L};W{I|L}[WE]{I|L}K{I|L};W{I|L}{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}{I|L}K;{[DA]|[EG]}[KQ]{[RE]|[WV]}{I|L}K;W{I|L}[WE]{I|L}{I|L}K;W[KQ][DG]{I|L}K{I|L};W[KQ][DG]{I|L}{I|L}K 5.1243;4.8192;2.1353;2.1173;1.9692;1.8302;1.8122;1.6641;0.71829;0.41316 +;-;-;-;-;-;-;-;-;- + 126 + 1 1.675 122840.9 1.0 5134 4619 9742 HBL1_DMSO_200M_050219_2,9755 HBL1_DMSO_200M_050219_2,9755,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9756 53.074 137.0 728300.0 25 0 67932.0 -1 MDNITRQNQFY 11 89 744.3308868787516 1486.647220824303 2 744.3317748904228 MULTI CID FTMS 0 0 0 9742 310759.0 0.1917000152831225 -2 0.1642608642578125 14 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 4 {[QN]|[E{I|L}]|[KN]}AQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y 12 -1 + 70.223 0.0 0.0 4.7236 4.7236 67.151 0.0 0.0 0.0 0.3476210625921254 10.189549981487076 0.3476210625921254 0.3476210625921254 0 0.7742275032520141 0.0 0.0 1.7689301784845295 {[QN]|[E{I|L}]|[KN]}AQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQE{M(Oxidation (M))|F}Q[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQE{M(Oxidation (M))|F}QQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[AG]E{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQE{M(Oxidation (M))|F}[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[AG]E{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y 4.7236;4.7002;4.3744;4.3714;4.3481;4.1116;4.1116;4.1116;4.1116;4.0899 -;-;-;-;-;-;-;-;-;- 2328 1 1.675 73832.7 1.0 5135 4619 9742 HBL1_DMSO_200M_050219_2,9756 HBL1_DMSO_200M_050219_2,9756,MDNITRQNQFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9757 53.083 494.0 1146800.0 25 0 316800.0 + 40294 VGVILSSV 8 192 387.24295654246055 772.4713601517211 2 387.2426635622978 MULTI CID FTMS 0 0 0 9742 194785.0625 1.0 0 0.0 15 Unmodified _VGVILSSV_ REV__ENSG00000108592|ENST00000427159|FTSJ3;REV__ENST00000577263.5_1_17:61903352-61904262:-|nuORF 19.438996006549623 0.6237395211498085 4 VPR{M(Oxidation (M))|F}VR 6 -1 + 71.84 0.0 0.0 9.3 9.3 86.281 0.0 0.0 0.0 11.777807052660805 3.356593000512831 3.356593000512831 3.356593000512831 0 1.0941876774005248 0.6777807052660807 0.0 1.6397727294836957 VPR{M(Oxidation (M))|F}VR;VPR{M(Oxidation (M))|F}RV;VPRV{M(Oxidation (M))|F}R;VRP{M(Oxidation (M))|F}VR;RPV{M(Oxidation (M))|F}VR;VRP{M(Oxidation (M))|F}RV;RPV{M(Oxidation (M))|F}RV;VRPV{M(Oxidation (M))|F}R;RPVV{M(Oxidation (M))|F}R;RVP{M(Oxidation (M))|F}VR 9.3;8.8654;8.2539;7.3206;6.9953;6.8861;6.5607;6.2745;5.9491;5.5686 -;-;-;-;-;-;-;-;-;- 450 + 1 1.675 432234.9 1.0 5136 4619 9742 HBL1_DMSO_200M_050219_2,9757 HBL1_DMSO_200M_050219_2,9757,VGVILSSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9758 53.097 800.0 263980.0 25 0 29550.0 37395 TLAGWGPG 8 182 379.6950125843325 0 379.6949645876884 PEAK CID FTMS 0 0 0 9742 136050.484375 0.9723939901458798 -1 0.0853729248046875 16 Unmodified _TLAGWGPG_ ENST00000263071.8_1_17:1543248-1547228:-|nuORF;ENST00000434376.6_1_17:1543256-1543940:-|nuORF 5.760428011301431 0.5786759180849727 4 {I|L}N 2 7 14.508 0.0 0.0 1.9156 0.0 0.0 276.10933679946777 251.11559330020592 527.2249300996737 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 {I|L}N 1.9156 - 35 + 1 1.675 168165.7 0.6299999952316284 5137 4619 9742 HBL1_DMSO_200M_050219_2,9758 HBL1_DMSO_200M_050219_2,9758,TLAGWGPG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9759 53.111 800.0 332660.0 25 0 12495.0 + 36507 TAFAHLREV 9 238 348.52628743961304 1042.557032919039 3 348.5257446169853 MULTI CID FTMS 0 0 0 9742 130141.59375 0.7218535751419365 -1 0.0853729248046875 17 Unmodified _TAFAHLREV_ ENSG00000169660|ENST00000327949|HEXD;nc|ENSG00000169660|Q8WVB3-2|HEXD 12.174745833636583 0.5071271664557081 4 TA{M(Oxidation (M))|F}AH{I|L}REV 9 0 + 65.786 0.0 0.0 6.3101 6.3101 78.104 0.0 0.0 0.0 47.28113324272441 0.5902924611682039 0.5902924611682039 2.7415784926367976 0 0.4049471895720985 1.6989700043360187 0.1382104921644452 0.0 + + TA{M(Oxidation (M))|F}AH{I|L}REV;TA{M(Oxidation (M))|F}AH{I|L}RD{I|L};TA{M(Oxidation (M))|F}AHV[W{I|L}]V;TA{M(Oxidation (M))|F}AHV{[RE]|[WV]}{I|L};TA{M(Oxidation (M))|F}AVH[W{I|L}]V;TA{M(Oxidation (M))|F}AV{[QN]|[E{I|L}]|[KN]}[RH];TA{M(Oxidation (M))|F}AVH{[RE]|[WV]}{I|L};TA{M(Oxidation (M))|F}AV[K{I|L}]{M(Oxidation (M))|F}{M(Oxidation (M))|F};TA{M(Oxidation (M))|F}VAH[W{I|L}]V;TA{M(Oxidation (M))|F}VA{[QN]|[E{I|L}]|[KN]}[RH] 6.3101;6.0471;5.105;4.8421;4.8163;4.7116;4.5533;4.4322;4.3587;4.254 +;-;-;-;-;-;-;-;-;- + 670 + 1 1.675 215921.8 0.5899999737739563 5138 4619 9742 HBL1_DMSO_200M_050219_2,9759 HBL1_DMSO_200M_050219_2,9759,TAFAHLREV False True TAFAHLREV 53.110835 348.525744616985 1983893.25 9742.0 ENSG00000169660|ENST00000327949|HEXD;;nc|ENSG00000169660|Q8WVB3-2|HEXD 5.642430464426677 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9760 53.126 800.0 72325.0 25 0 19143.0 -1 0 32 1171.4728377762654 3511.396683928996 3 1172.139575183392 MULTI CID FTMS 0 0 0 9742 103930.3359375 0.863288538392771 -1 0.0853729248046875 18 4 E 1 -1 6.9897 0.0 0.0 0.19906 0.0 0.0 2855.167752059143 524.1630343072874 3379.3307863664304 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19906 - 1 + 1 1.675 55010.6 0.5699999928474426 5139 4619 9742 HBL1_DMSO_200M_050219_2,9760 HBL1_DMSO_200M_050219_2,9760, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9762 53.13 5.8 9420300.0 25 0 2273300.0 + 9943 FPGKHFQEI 9 83 368.19447723393614 1101.5616023020084 3 368.1942626833916 MULTI CID FTMS 0 0 0 9761 8598658.0 0.8916109849929857 -1 0.0913619995117187 1 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 18.1463463914782 0.3454829746528889 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PG]APQE 8 4 29.09 0.0 0.0 2.6408 0.0 0.0 0.0 275.1396555299355 275.1396555299355 12.892587542690915 0.0 0.0 0.0 0 0.0 2.0 0.0 0.9247425010840048 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PG]APQE 2.6408 - 334 1 1.675 50105.6 1.0 5140 4620 9761 HBL1_DMSO_200M_050219_2,9762 HBL1_DMSO_200M_050219_2,9762,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9763 53.132 7.5 10192000.0 25 0 1788600.0 + 4965 DGPRVFRV 8 58 473.2671945402128 944.5198361472256 2 473.2672912478447 MULTI CID FTMS 0 0 0 9761 7479843.0 0.9244441384871104 1 -0.1103248596191406 2 Unmodified _DGPRVFRV_ ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF;nc|ENSG00000179115|Q9Y285-2|FARSA 11.640296217721598 0.738950129755968 4 DV[NP]V 5 5 23.64 0.0 0.0 2.5029 0.0 0.0 0.0 417.2269991510376 417.2269991510376 19.035984316004217 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 DV[NP]V 2.5029 - 14 + 1 1.675 66219.6 1.0 5141 4620 9761 HBL1_DMSO_200M_050219_2,9763 HBL1_DMSO_200M_050219_2,9763,DGPRVFRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9764 53.133 8.6 5900000.0 25 0 718660.0 + 41724 VPSTAIREI 9 78 493.28763735717104 984.560721781142 2 493.2877685427666 MULTI CID FTMS 0 0 0 9761 6334624.0 0.8616952762625044 1 -0.1103248596191406 3 Unmodified _VPSTAIREI_ ENSG00000123374|ENST00000266970|CDK2;ENSG00000170312|ENST00000395284|CDK1;ENSG00000250506|ENST00000448471|CDK3;ENST00000475504.6_1_10:62539923-62545554:+|nuORF;ENST00000567351.5_2_17:73997368-73998786:+|nuORF;nc|ENSG00000123374|P24941-2|CDK2;nc|ENSG00000170312|P06493-2|CDK1 22.65808497894818 0.2428932432760099 4 VPSTA{I|L} 6 3 65.935 0.0 0.0 6.6969 0.0 0.0 0.0 413.2165621393188 413.2165621393188 54.34115329172698 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.0 0.0 + VPSTA{I|L} 6.6969 + + 51 + 1 1.675 43452.1 1.0 5142 4620 9761 HBL1_DMSO_200M_050219_2,9764 HBL1_DMSO_200M_050219_2,9764,VPSTAIREI False True VPSTAIREI 53.132781 493.287768542767 116972680.0 9761.0 ENST00000475504.6_1_10:62539923-62545554:+|nuORF;;ENSG00000170312|ENST00000395284|CDK1;;ENSG00000123374|ENST00000266970|CDK2;;ENSG00000250506|ENST00000448471|CDK3;;nc|ENSG00000123374|P24941-2|CDK2;;nc|ENSG00000170312|P06493-2|CDK1;;ENST00000567351.5_2_17:73997368-73998786:+|nuORF 6.884392897288005 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9765 53.134 12.0 3920500.0 25 0 406130.0 + 9951 FPGKHFQEI 9 80 551.7875691100098 1101.5605852868196 2 551.7879516482353 MULTI CID FTMS 0 0 0 9761 4283127.5 0.9145589695748976 -1 0.0913619995117187 4 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 35.61225514009592 0.0995432151795903 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E 9 3 + 54.877 0.0 0.0 4.9818 4.9818 74.465 0.0 0.0 0.0 17.420095690311634 26.931978741082368 17.420095690311634 3.564921830680703 0 0.9247425010840048 1.6989700043360187 0.9247425010840048 0.805462187404089 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQE{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]E{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[YK]PE;{M(Oxidation (M))|F}PYQ[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[PG]K{M(Oxidation (M))|F}HQE{M(Oxidation (M))|F}{I|L} 4.9818;4.6582;4.6374;4.1459;3.8222;3.8015;2.9389;2.9208;2.907;2.8742 -;-;-;-;-;-;-;-;-;- 364 1 1.675 43177.9 1.0 5143 4620 9761 HBL1_DMSO_200M_050219_2,9765 HBL1_DMSO_200M_050219_2,9765,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9766 53.135 14.0 3782700.0 25 0 231830.0 + 25020 MPQNRTIYV 9 78 561.2920781089607 1120.569603284721 2 561.2925903201103 MULTI CID FTMS 0 0 0 9761 2795211.5 0.547682220611847 -1 0.0913619995117187 5 Unmodified _MPQNRTIYV_ ENSG00000166801|ENST00000675163|FAM111A 23.78978130925829 0.2284941198415988 4 MPQ 3 6 40.956 0.0 0.0 3.6549 0.0 0.0 0.0 761.3999117486936 761.3999117486936 8.53286222516239 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.3252574989159953 + MPQ 3.6549 + + 38 + 1 1.675 47159.3 1.0 5144 4620 9761 HBL1_DMSO_200M_050219_2,9766 HBL1_DMSO_200M_050219_2,9766,MPQNRTIYV False True MPQNRTIYV 53.135137 561.29259032011 69488728.0 9761.0 ENSG00000166801|ENST00000675163|FAM111A 7.8599853515625 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9767 53.136 21.0 3011900.0 25 0 245300.0 + 43061 VYIDKVRSL 9 66 546.8245670816482 1091.6345812300965 2 546.8243896365166 MULTI CID FTMS 0 0 0 9761 2730444.0 0.8650754770467926 1 -0.1103248596191406 6 Unmodified _VYIDKVRSL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 23.78978130925829 0.2284941198415988 4 VY{I|L}DKV 6 3 70.706 0.0 0.0 6.4771 0.0 0.0 0.0 371.2056063287719 371.2056063287719 63.71645960868548 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + VY{I|L}DKV 6.4771 + + 51 + 1 1.675 55347.0 1.0 5145 4620 9761 HBL1_DMSO_200M_050219_2,9767 HBL1_DMSO_200M_050219_2,9767,VYIDKVRSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9768 53.138 51.0 1110700.0 25 0 102600.0 + -1 MPLSTIREV 9 77 531.2862915780435 1060.5580302228868 2 531.2869750857353 MULTI CID FTMS 0 0 0 9761 1013057.375 1.0 0 0.0 7 Oxidation (M) _M(Oxidation (M))PLSTIREV_ ENSG00000105810|ENST00000424848|CDK6 36.506200033944 0.094635877243972 4 {M(Oxidation (M))|F}P{I|L}ST{I|L}{[RE]|[WV]}V 9 -1 + 61.432 0.0 0.0 5.7924 5.7924 88.898 0.0 0.0 0.0 40.46265935169153 4.973024840566467 4.973024840566467 23.750612633917 0 1.0 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}P{I|L}ST{I|L}{[RE]|[WV]}V;Y{[HG]|PP}ST{I|L}{[RE]|[WV]}V 5.7924;3.553 +;- + 93 + 1 1.675 51855.2 1.0 5146 4620 9761 HBL1_DMSO_200M_050219_2,9768 HBL1_DMSO_200M_050219_2,9768,MPLSTIREV False False MPLSTIREV 53.137664 531.286975085735 10730155.0 9761.0 ENSG00000105810|ENST00000424848|CDK6 7.981228351593018 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9769 53.139 41.0 1165200.0 25 0 159260.0 + 3248 AYFTHSNL 8 83 476.72954736846646 951.4445418037328 2 476.7296935915947 MULTI CID FTMS 0 0 0 9761 1007007.3125 1.0 0 0.0 8 Unmodified _AYFTHSNL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 19.256988751693697 0.6264283240490721 4 AY{M(Oxidation (M))|F}TT 5 4 50.802 0.0 0.0 5.3395 0.0 0.0 0.0 365.16367517642817 365.16367517642817 31.4755409084696 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 AY{M(Oxidation (M))|F}TT 5.3395 - 107 + 1 1.675 41225.6 1.0 5147 4620 9761 HBL1_DMSO_200M_050219_2,9769 HBL1_DMSO_200M_050219_2,9769,AYFTHSNL False True AYFTHSNL 53.138841 476.729693591595 6809248.0 9761.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 5.801977793375651 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9770 53.14 26.0 2126900.0 25 0 148770.0 + 40084 VGHVLNLSV 9 90 469.27679076482383 936.5390285964476 2 470.7774230837822 MULTI CID FTMS 0 0 0 9761 915728.3125 0.9539148349770286 -1 0.0913619995117187 9 Unmodified _VGHVLNLSV_ REV__chr6:116125507-116158614|14|15.14|0.81|4.22|-|ENST00000418500|COL10A1,COL10A1;REV__ENSG00000123500|ENST00000651968|COL10A1 13.50788311687929 0.4710407108020397 4 [VG]{I|L} 3 -1 19.621 0.0 0.0 2.0951 0.0 0.0 0.0 664.3414632490445 664.3414632490445 -4.993274430065565 0.0 -4.993274430065565 0.0 0 0.0 2.0 0.0 0.0 [VG]{I|L} 2.0951 - 331 1 1.675 50929.0 1.0 5148 4620 9761 HBL1_DMSO_200M_050219_2,9770 HBL1_DMSO_200M_050219_2,9770,VGHVLNLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9771 53.143 126.0 572530.0 25 0 40315.0 -1 0 75 918.419584038686 1834.824615144172 2 918.9218017458916 MULTI CID FTMS 0 0 0 9761 878550.6875 0.8636327806406525 -1 0.0913619995117187 10 4 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}DP{[QN]|[E{I|L}]|[KN]} 16 -1 + 64.409 0.0 0.0 3.5104 3.5104 70.825 0.0 0.0 0.0 4.164317917986224 46.706094119810544 4.164317917986224 4.766477010300449 0 0.0 0.0 0.3807196863200844 0.7059771852360797 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[TA]{[HG]|PP}MQDAN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QDAN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAGG{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]DAN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDY{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDY{I|L}HV[HC];[NP]{I|L}[TA]{[HG]|PP}MQDAN{I|L}DV[HC];[NP]{I|L}N{M(Oxidation (M))|F}[HV]QWN{I|L}DV[HC] 3.5104;3.2506;3.0759;3.0191;3.0191;3.0191;3.0046;2.7724;2.7018;2.5959 -;-;-;-;-;-;-;-;-;- 1116 1 1.675 53384.6 1.0 5149 4620 9761 HBL1_DMSO_200M_050219_2,9771 HBL1_DMSO_200M_050219_2,9771, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9772 53.144 60.0 878380.0 25 0 67223.0 + 10097 FPTSQRLPA 9 86 508.77910317956525 1015.5436534259304 2 508.7792236208916 MULTI CID FTMS 0 0 0 9761 648632.625 0.7002707663805968 12 -0.9927902221679688 11 Unmodified _FPTSQRLPA_ ENST00000399831.7_1_8:38965091-38975631:+|nuORF 13.042465956692816 0.4836390050082244 4 GTPE 4 7 36.23 0.0 0.0 3.5675 0.0 0.0 613.3536854474625 0.0 613.3536854474625 0.0 15.796896906561033 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 GTPE 3.5675 - 71 1 1.675 52499.2 1.0 5150 4620 9761 HBL1_DMSO_200M_050219_2,9772 HBL1_DMSO_200M_050219_2,9772,FPTSQRLPA False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9773 53.147 143.0 714510.0 25 0 85836.0 + 15234 IPFSKPVKV 9 107 338.883469980711 1013.6285805423332 3 338.8829833865166 MULTI CID FTMS 0 0 0 9761 331781.34375 0.1104354260519936 8 -0.7297821044921875 12 Unmodified _IPFSKPVKV_ ENSG00000149262|ENST00000534064|INTS4 12.240655878213236 0.5053430591993562 4 {I|L}PVQ 4 6 31.982 0.0 0.0 3.1552 0.0 0.0 0.0 573.3282397613275 573.3282397613275 6.488255516215912 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 {I|L}PVQ 3.1552 - 216 + 1 1.675 92361.4 1.0 5151 4620 9761 HBL1_DMSO_200M_050219_2,9773 HBL1_DMSO_200M_050219_2,9773,IPFSKPVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9774 53.159 704.0 303290.0 25 0 21238.0 -1 0 185 464.2424715861071 463.2351951195071 1 464.2423583865166 MULTI CID FTMS 0 0 0 9761 287184.46875 0.9260761718287476 5 -0.4587821960449219 13 4 V{I|L} 2 -1 17.959 0.0 0.0 3.8768 0.0 0.0 233.0714358195055 0.0 233.0714358195055 0.0 3.002829796780029 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L} 3.8768 - 121 + 1 1.675 166134.8 1.0 5152 4620 9761 HBL1_DMSO_200M_050219_2,9774 HBL1_DMSO_200M_050219_2,9774, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9775 53.172 751.0 399420.0 25 0 49406.0 + 42289 GQWDPADPAPSA 12 198 606.2706823034963 1210.5268116737925 2 606.2699462771416 MULTI CID FTMS 0 0 0 9761 196907.8125 0.7462756391792431 -1 0.0913619995117187 14 Unmodified _VSSAPEECRSF_ ENSG00000169710|ENST00000306749|FASN 24.99096001346401 0.505407273373304 4 {[QG]|[NA]}WD[PA]DAP 9 10 35.29 0.0 0.0 2.9152 0.0 0.0 0.0 270.1133438769877 270.1133438769877 1.809635905874465 0.0 0.0 0.0 0 1.870371515030528 0.2441251443275086 0.2614393726401688 1.080780892006716 {[QG]|[NA]}WD[PA]DAP 2.9152 - 5026 1 1.675 211624.9 1.0 5153 4620 9761 HBL1_DMSO_200M_050219_2,9775 HBL1_DMSO_200M_050219_2,9775,VSSAPEECRSF False False GQWDPADPAPSA 53.172208 606.269946277142 2143174.75 9761.0 ENSG00000169710|ENST00000306749|FASN 5.780901273091634 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9776 53.186 794.0 224110.0 25 0 36802.0 6872 EEEIQTLRVYY 11 146 721.8587202429406 1441.7028875526812 2 721.8601562380791 MULTI CID FTMS 0 0 0 9761 189910.0625 0.7193218128155551 -1 0.0913619995117187 15 Unmodified _EEEIQTLRVYY_ ENSG00000151338|ENST00000684589|MIPOL1;ENST00000553349.1_1_14:37754581-37892775:+|nuORF;ENST00000555870.5_1_14:37739712-37970779:+|nuORF;nc|ENSG00000151338|Q8TD10-2|MIPOL1 7.608950283845883 0.8392484121837455 4 [QT]PS{I|L}SVTQV 10 10 51.919 0.0 0.0 3.6012 0.0 0.0 0.0 398.1242492072312 398.1242492072312 0.2266668437067238 0.0 0.0 0.0 0 0.0 0.0 2.519969168427319 0.0 [QT]PS{I|L}SVTQV 3.6012 - 8159 1 1.675 127827.4 1.0 5154 4620 9761 HBL1_DMSO_200M_050219_2,9776 HBL1_DMSO_200M_050219_2,9776,EEEIQTLRVYY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9777 53.2 800.0 256870.0 25 0 9882.1 2745 ATIVHDTSEA 10 201 522.2540786401801 1042.49360434716 2 522.2536498904228 MULTI CID FTMS 0 0 0 9761 169098.0 0.8410383446182631 -1 0.0913619995117187 16 Unmodified _ATIVHDTSEA_ ENSG00000197976|ENST00000313871|AKAP17A;nc|ENSG00000292343|Q02040-2|AKAP17A;nc|ENSG00000292343|Q02040-3|AKAP17A 13.90604991867851 0.6142120002215601 4 [TA][{I|L}T]RAGTVA 10 6 45.729 0.0 0.0 4.3865 0.0 0.0 0.0 97.96109181746706 97.96109181746706 23.1485542541496 0.0 0.0 0.0 0 0.6861818737241735 1.6989700043360187 0.6549471895720985 0.0 [TA][{I|L}T]RAGTVA 4.3865 - 2094 1 1.675 161844.1 0.9800000190734864 5155 4620 9761 HBL1_DMSO_200M_050219_2,9777 HBL1_DMSO_200M_050219_2,9777,ATIVHDTSEA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9778 53.204 253.0 373490.0 25 0 36241.0 -1 LCWALLCL 8 140 496.2567439352675 0 496.2558471560478 PEAK CID FTMS 0 0 0 9761 169688.046875 0.9410336033698252 -1 0.0913619995117187 17 Carbamidomethyl (C) _LC(Carbamidomethyl (C))WALLCL_ nc|ENSG00000211728|A0A599|TRBV5-6;nc|ENSG00000230099|A0A0C4DH59|TRBV5-4 17.086550045450526 0.4618975036900928 4 HM 2 -1 12.959 0.0 0.0 1.3083 0.0 0.0 97.02116501721623 622.331387464099 719.3525524813152 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 HM 1.3083 - 232 + 1 1.675 74370.8 1.0 5156 4620 9761 HBL1_DMSO_200M_050219_2,9778 HBL1_DMSO_200M_050219_2,9778,LCWALLCL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9779 53.209 141.0 349540.0 25 0 40788.0 -1 NYTCCWTY 8 70 555.7059440841518 1109.3973352351036 2 555.7059203982353 MULTI CID FTMS 0 0 0 9761 160951.40625 0.3500858383889177 -1 0.0913619995117187 18 Carbamidomethyl (C) _NYTC(Carbamidomethyl (C))CWTY_ ENSG00000180083|ENST00000324384|WFDC11 5.760428011301431 0.7893668129297577 4 TY 2 -1 19.693 0.0 0.0 1.7751 0.0 0.0 827.2752492086892 0.0 827.2752492086892 0.0 10.01502755069862 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TY 1.7751 + + 47 + 1 1.675 42978.4 1.0 5157 4620 9761 HBL1_DMSO_200M_050219_2,9779 HBL1_DMSO_200M_050219_2,9779,NYTCCWTY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9780 53.223 800.0 177630.0 25 0 12532.0 -1 0 182 587.3274853232489 586.3202088566488 1 587.2947265505791 MULTI CID FTMS 0 0 0 9761 86755.6875 0.2129455666734422 -5 0.2915534973144531 19 4 Q 1 -1 11.42 0.0 0.0 1.9477 0.0 0.0 440.25044369727226 0.0 440.25044369727226 0.0 1.1423966425768484 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 1.9477 - 162 + 1 1.675 108745.9 0.9200000166893004 5158 4620 9761 HBL1_DMSO_200M_050219_2,9780 HBL1_DMSO_200M_050219_2,9780, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9781 53.236 800.0 164220.0 25 0 15984.0 3555 CYGRYWSYGFY 11 142 732.8048429163354 1463.5951328994706 2 732.8057128787041 MULTI CID FTMS 0 0 0 9761 118912.265625 0.9429091798901648 -1 0.0913619995117187 20 Unmodified _CYGRYWSYGFY_ ENSG00000244624|ENST00000334664|KRTAP20-1 18.1463463914782 0.6576820063886638 4 [AG]DQ[HN]AQQDA 11 11 78.14 0.0 0.0 5.3389 0.0 0.0 0.0 325.1186429626127 325.1186429626127 53.25357868948093 0.0 0.0 0.0 0 0.5 1.3979400086720375 2.1153565665482863 1.079689690656103 [AG]DQ[HN]AQQDA 5.3389 - 3647 1 1.675 97063.8 0.8399999737739563 5159 4620 9761 HBL1_DMSO_200M_050219_2,9781 HBL1_DMSO_200M_050219_2,9781,CYGRYWSYGFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9783 53.241 3.0 16136000.0 25 0 2120100.0 + 38642 TTIKAFFPKK 10 76 394.2414100849522 1179.7024008550568 3 394.2414733767509 MULTI CID FTMS 0 0 0 9782 14921753.0 0.7953135843002649 1 -0.0880775451660156 1 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 32.78568957990786 0.2337485590374503 4 TT{I|L}KY{I|L}WKK 9 4 + 90.341 0.0 0.0 7.658 7.658 96.922 0.0 0.0 0.0 72.70426282903784 17.230749808046326 17.230749808046326 90.34108775949186 0 0.75 1.5228787452803376 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK 7.658 - 93 + 1 1.669 47290.2 1.0 5160 4621 9782 HBL1_DMSO_200M_050219_2,9783 HBL1_DMSO_200M_050219_2,9783,TTIKAFFPKK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9784 53.242 23.0 1938800.0 25 0 237880.0 + 43063 VYIDKVRSL 9 57 364.885595889924 1091.634958269972 3 364.8854247927666 MULTI CID FTMS 0 0 0 9782 1255413.5 0.2455797489847497 2 -0.1425704956054687 2 Unmodified _VYIDKVRSL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 23.78978130925829 0.2284941198415988 4 VY{I|L}DKV 6 3 66.503 0.0 0.0 6.0921 0.0 0.0 0.0 371.2068880670532 371.2068880670532 59.513356515246514 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.0 0.4247425010840047 + VY{I|L}DKV 6.0921 + + 43 + 1 1.669 45760.2 1.0 5161 4621 9782 HBL1_DMSO_200M_050219_2,9784 HBL1_DMSO_200M_050219_2,9784,VYIDKVRSL False True VYIDKVRSL 53.241928 364.885424792767 115264588.0 9782.0 chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;;ENSG00000113368|ENST00000261366|LMNB1 4.792046864827474 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9785 53.243 17.0 3249400.0 25 0 706410.0 + 5089 DGYVVKETI 9 79 512.2705710040321 1022.5265890748644 2 512.2720214724541 MULTI CID FTMS 0 0 0 9782 3235002.0 0.6648703873489322 1 -0.0880775451660156 3 Unmodified _DGYVVKETI_ ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1;nc|ENSG00000117676|Q15418-3|RPS6KA1;nc|ENSG00000117676|Q15418-4|RPS6KA1 36.506200033944 0.094635877243972 4 [DG]YV 4 5 25.45 0.0 0.0 2.4889 0.0 0.0 0.0 585.323408493086 585.323408493086 -0.9805894699928784 0.0 -0.9805894699928784 0.0 0 1.0 0.9208187539523752 0.0 0.0 + [DG]YV 2.4889 + + 288 1 1.669 48479.5 1.0 5162 4621 9782 HBL1_DMSO_200M_050219_2,9785 HBL1_DMSO_200M_050219_2,9785,DGYVVKETI True True DGYVVKETI 53.243105 512.272021472454 66578168.0 9782.0 nc|ENSG00000117676|Q15418-3|RPS6KA1;;nc|ENSG00000117676|Q15418-4|RPS6KA1;;nc|ENSG00000117676|Q15418-2|RPS6KA1;;ENSG00000117676|ENST00000374168|RPS6KA1 6.670644919077556 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9786 53.244 18.0 3287900.0 25 0 457030.0 + 21888 LPPEVNRI 8 55 469.27679076482383 936.5390285964476 2 469.2773010134697 MULTI CID FTMS 0 0 0 9782 3133882.25 0.3514019772542207 -3 0.2870597839355469 4 Unmodified _LPPEVNRI_ ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 14.838274106304384 0.6917062315640577 4 {I|L}PPE 4 4 53.175 0.0 0.0 5.6779 0.0 0.0 0.0 497.2847078912719 497.2847078912719 46.18562527100117 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPE 5.6779 + + 32 + 1 1.669 50835.9 1.0 5163 4621 9782 HBL1_DMSO_200M_050219_2,9786 HBL1_DMSO_200M_050219_2,9786,LPPEVNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9787 53.245 26.0 2125600.0 25 0 143390.0 + 38052 TPESKIRFV 9 73 359.54216894291795 1075.604677428954 3 359.5415222048759 MULTI CID FTMS 0 0 0 9782 2356307.25 0.9836935234043964 -1 0.1103248596191406 5 Unmodified _TPESKIRFV_ ENSG00000093144|ENST00000454859|ECHDC1;ENST00000475319.1_1_6:127611016-127636085:-|nuORF;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1 30.7034409873982 0.1405282614900322 4 TPESK{I|L} 6 3 66.52 0.0 0.0 6.1845 0.0 0.0 0.0 417.22896277526746 417.22896277526746 54.73766669900519 0.0 0.0 0.0 0 0.6861818737241735 1.0457574905606752 0.805462187404089 0.0 + TPESK{I|L} 6.1845 + + 71 + 1 1.669 57273.5 1.0 5164 4621 9782 HBL1_DMSO_200M_050219_2,9787 HBL1_DMSO_200M_050219_2,9787,TPESKIRFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9788 53.247 27.0 2283100.0 25 0 245020.0 38646 TTIKAFFPKK 10 71 590.8583818750385 1179.702210816877 2 590.8585693240166 MULTI CID FTMS 0 0 0 9782 2288269.0 0.9013036841380732 1 -0.0880775451660156 6 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 36.506200033944 0.1944608063770638 4 {[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK 9 4 + 78.153 0.0 0.0 6.6248 6.6248 93.353 0.0 0.0 0.0 55.01979729363555 18.78022170376731 18.78022170376731 56.92593794827836 0 2.274227503252014 0.0 0.0 0.3807196863200844 {[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK;{[DS]|[MA]|[CV]|TT}[K{I|L}][RH]K{I|L}[PS];{[DS]|[MA]|[CV]|TT}{I|L}K[RH][R{I|L}][VG];[K{I|L}]Y[W{I|L}]{[DS]|[MA]|[CV]|TT}KK 6.6248;1.7994;0.94464;0.0010853 -;-;-;- 237 + 1 1.669 52126.2 1.0 5165 4621 9782 HBL1_DMSO_200M_050219_2,9788 HBL1_DMSO_200M_050219_2,9788,TTIKAFFPKK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9789 53.248 56.0 1391200.0 25 0 167130.0 + 4176 DAPIGPHL 8 78 410.2217440023912 818.4289350715824 2 410.2216979861259 MULTI CID FTMS 0 0 0 9782 1242228.5 0.2901416013617797 -3 0.2870597839355469 7 Unmodified _DAPIGPHL_ ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A 36.46614268402704 0.2934124525509074 4 {[DA]|[EG]}P{I|L}GPH{I|L} 8 0 + 59.868 0.0 0.0 7.315 7.315 84.214 0.0 0.0 0.0 45.82715391783915 8.443350238481031 8.443350238481031 4.157430877661248 0 0.6203715150305281 2.0 0.0 0.0 + + {[DA]|[EG]}P{I|L}GPH{I|L};{[DA]|[EG]}{I|L}PGPH{I|L} 7.315;6.807 +;- + 85 + 1 1.669 65612.7 1.0 5166 4621 9782 HBL1_DMSO_200M_050219_2,9789 HBL1_DMSO_200M_050219_2,9789,DAPIGPHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9790 53.249 49.0 1687900.0 25 0 379900.0 + 14939 ILMEHIHKL 9 98 378.55491615673407 1132.6429190704025 3 378.5550109744072 MULTI CID FTMS 0 0 0 9782 924255.75 0.0615356711261247 -3 0.2870597839355469 8 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 42.312485326615175 0.0627620958981271 4 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 83.964 0.0 0.0 7.4131 7.4131 93.342 0.0 0.0 0.0 58.4820363053399 8.372505457509973 8.372505457509973 14.547509540478032 0 0.555462187404089 2.0 0.805462187404089 0.0 + + {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}M{I|L}{[YC]|[HE]}HK{I|L};{I|L}{I|L}M{I|L}{M(Oxidation (M))|F}QQK{I|L};{I|L}{I|L}[YV]EQQK{I|L};{I|L}{I|L}M{I|L}[RK][C(Carbamidomethyl (C))S]{I|L};{I|L}[YV]{I|L}EQQK{I|L};[KP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}H{I|L}HK{I|L} 7.4131;6.1287;4.7768;4.4496;4.3178;1.6668;1.5148 +;-;-;-;-;-;- + 539 + 1 1.669 69919.4 1.0 5167 4621 9782 HBL1_DMSO_200M_050219_2,9790 HBL1_DMSO_200M_050219_2,9790,ILMEHIHKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9791 53.251 54.0 799160.0 25 0 51071.0 30651 RFPDGTNGL 9 83 488.7464410504657 975.4783291677312 2 488.7464782595634 MULTI CID FTMS 0 0 0 9782 895708.5625 0.5829407426256944 -16 1.1682586669921875 9 Unmodified _RFPDGTNGL_ ENSG00000164442|ENST00000367651|CITED2;nc|ENSG00000164442|Q99967-2|CITED2 24.020572477871973 0.2255576514309169 4 {[RE]|[WV]}CVSVNG{I|L} 9 5 + 40.028 0.0 0.0 4.1034 4.1034 65.745 0.0 0.0 0.0 17.86098023303616 0.791812460476244 0.791812460476244 0.791812460476244 0 0.3935078169319297 1.2218487496163564 0.0 0.5 {[RE]|[WV]}CVSVNG{I|L};{[RE]|[WV]}CVSVNAV;{[RE]|[WV]}{[ET]|[MV]}GT{[{M(Oxidation (M))|F}H]|[RQ]};{[RE]|[WV]}{[WT]|[RM]}T{[{M(Oxidation (M))|F}H]|[RQ]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EEGT{[{M(Oxidation (M))|F}H]|[RQ]};{[TV]|[{I|L}S]}[WE]GT{[{M(Oxidation (M))|F}H]|[RQ]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WE]T{[{M(Oxidation (M))|F}H]|[RQ]} 4.1034;4.0222;2.1159;1.7674;0.9914;0.81088;0.6429 -;-;-;-;-;-;- 149 + 1 1.669 41247.5 1.0 5168 4621 9782 HBL1_DMSO_200M_050219_2,9791 HBL1_DMSO_200M_050219_2,9791,RFPDGTNGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9792 53.253 77.0 869810.0 25 0 120120.0 + 21962 LPPMDHSTI 9 92 505.7526348088312 1009.4907166844624 2 505.7527648806572 MULTI CID FTMS 0 0 0 9782 798912.875 0.8031826441351376 11 -0.8824653625488281 10 Unmodified _LPPMDHSTI_ ENSG00000064666|ENST00000263097|CNN2;nc|ENSG00000064666|Q99439-2|CNN2 48.345845343767074 0.0439967357579942 4 {I|L}P{NN|[MP]|[D{I|L}]|[EV]}D[HS]T{I|L} 9 0 + 46.862 0.0 0.0 4.6421 4.6421 77.402 0.0 0.0 0.0 14.976431722953691 1.6453817911611424 1.6453817911611424 7.171071165715944 0 0.7742275032520141 2.0 0.6989700043360187 0.0 + + {I|L}P{NN|[MP]|[D{I|L}]|[EV]}D[HS]T{I|L};[PS][HM]DT{I|L}P{I|L};[PS][HM]DTP{I|L}{I|L};{[MG]|[TS]}[YE]ST{I|L}P{I|L};{[MG]|[TS]}[YE]STP{I|L}{I|L};{[MG]|[TS]}[YT]DT{I|L}P{I|L};{[MG]|[TS]}[YT]DTP{I|L}{I|L};{[MG]|[TS]}W{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}P{I|L};[{I|L}P]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[YN]P{I|L};{[MG]|[TS]}W{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{I|L}{I|L} 4.6421;3.9318;3.7529;3.7502;3.5714;3.2776;3.0987;2.8368;2.7199;2.658 +;-;-;-;-;-;-;-;-;- + 225 + 1 1.669 56532.4 1.0 5169 4621 9782 HBL1_DMSO_200M_050219_2,9792 HBL1_DMSO_200M_050219_2,9792,LPPMDHSTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9793 53.254 84.0 707730.0 25 0 87722.0 -1 QSLNKMCSNL 10 94 577.2703474646505 1152.526141996101 2 577.2710449099541 MULTI CID FTMS 0 0 0 9782 493779.5 0.9488133186216008 -1 0.1103248596191406 11 Oxidation (M) _QSLNKM(Oxidation (M))CSNL_ ENSG00000159479|ENST00000372457|MED8;ENST00000460803.1_1_1:43851595-43852591:-|nuORF;ENST00000473560.1_1_1:43852218-43853308:-|nuORF;nc|ENSG00000159479|Q96G25-2|MED8;nc|ENSG00000159479|Q96G25-3|MED8 12.240655878213236 0.6421556946785427 4 {[QS]|[NT]}MV 4 -1 31.571 0.0 0.0 2.7393 0.0 0.0 0.0 704.303002918229 704.303002918229 19.352866827946634 0.0 0.0 0.0 0 0.5 0.721246399047171 0.1923877696554315 0.2742275032520141 {[QS]|[NT]}MV 2.7393 - 55 1 1.669 50865.5 1.0 5170 4621 9782 HBL1_DMSO_200M_050219_2,9793 HBL1_DMSO_200M_050219_2,9793,QSLNKMCSNL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9794 53.258 182.0 661870.0 25 0 161110.0 + 30850 RILPQDLERA 10 90 605.8489222727723 1209.6832916123444 2 605.8492309451103 MULTI CID FTMS 0 0 0 9782 467773.03125 0.8187220054944875 -1 0.1103248596191406 12 Unmodified _RILPQDLERA_ ENSG00000148296|ENST00000372022|SURF6;ENST00000468290.1_1_9:136198707-136199617:-|nuORF 31.635753872319068 0.2578985419642538 4 R{I|L}{I|L} 3 7 37.774 0.0 0.0 3.1226 0.0 0.0 0.0 824.3870510512099 824.3870510512099 0.0385636079397144 0.0 0.0 0.0 0 0.5 0.958607314841775 0.0 0.0 + R{I|L}{I|L} 3.1226 + + 117 + 1 1.669 91152.9 1.0 5171 4621 9782 HBL1_DMSO_200M_050219_2,9794 HBL1_DMSO_200M_050219_2,9794,RILPQDLERA False True RILPQDLERA 53.257934 605.84923094511 4275654.0 9782.0 ENSG00000148296|ENST00000372022|SURF6;;ENST00000468290.1_1_9:136198707-136199617:-|nuORF 6.38727076848348 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9795 53.267 514.0 291260.0 25 0 85007.0 -1 GVEMCLVDVPA 11 124 595.2826865577357 1188.5508201822713 2 595.2833129763603 MULTI CID FTMS 0 0 0 9782 389208.78125 1.0 0 0.0 13 Carbamidomethyl (C) _GVEMC(Carbamidomethyl (C))LVDVPA_ ENSG00000173250|ENST00000311104|GPR151 24.020572477871973 0.5281922720044371 4 W{I|L}AAVTVE 8 -1 66.184 0.0 0.0 5.5684 0.0 0.0 0.0 316.0433748834594 316.0433748834594 39.74459450371789 0.0 0.0 0.0 0 0.5 0.0 2.3494850021680094 0.0 W{I|L}AAVTVE 5.5684 - 842 + 1 1.669 115011.7 1.0 5172 4621 9782 HBL1_DMSO_200M_050219_2,9795 HBL1_DMSO_200M_050219_2,9795,GVEMCLVDVPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9796 53.272 266.0 379200.0 25 0 37695.0 + 3748 DAGALLHVS 9 113 441.7379624388519 881.4613719445039 2 441.7377502322197 MULTI CID FTMS 0 0 0 9782 385060.625 0.8692653656029272 -1 0.1103248596191406 14 Unmodified _DAGALLHVS_ REV__nc|ENSG00000111266|Q9BY84-2|DUSP16 57.47134341890925 0.0274820932774257 4 {[DA]|[EG]}Q 3 -1 35.374 0.0 0.0 4.0131 0.0 0.0 0.0 564.3152941818541 564.3152941818541 5.828390362988145 0.0 0.0 0.0 0 0.5 2.0 0.531234684152075 0.0 {[DA]|[EG]}Q 4.0131 - 266 1 1.669 84178.8 1.0 5173 4621 9782 HBL1_DMSO_200M_050219_2,9796 HBL1_DMSO_200M_050219_2,9796,DAGALLHVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9797 53.282 546.0 275640.0 25 0 27346.0 + 14319 IENVCAPHNMV 11 136 613.7861274419857 1225.5577019507714 2 613.7867309451103 MULTI CID FTMS 0 0 0 9782 353077.34375 1.0 0 0.0 15 Unmodified _IENVCAPHNMV_ REV__ENSG00000184922|ENST00000331495|FMNL1;REV__ENST00000587856.1_1_17:43311355-43318139:+|nuORF;REV__nc|ENSG00000184922|O95466-2|FMNL1;REV__nc|ENSG00000184922|O95466-3|FMNL1 15.248480904072842 0.7179608125786238 4 VSSVT{I|L} 6 -1 44.602 0.0 0.0 3.6393 0.0 0.0 320.1586090343572 316.0427340143188 636.201343048676 0.0 0.0 0.0 0.0 0 0.0 0.0 2.1861818737241734 0.0 VSSVT{I|L} 3.6393 - 949 + 1 1.669 112582.2 1.0 5174 4621 9782 HBL1_DMSO_200M_050219_2,9797 HBL1_DMSO_200M_050219_2,9797,IENVCAPHNMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9798 53.289 402.0 567120.0 25 0 57519.0 + 16899 KIIDIQEKV 9 180 362.557299968759 1084.650070506477 3 362.5569946169853 MULTI CID FTMS 0 0 0 9782 313489.4375 1.0 0 0.0 16 Unmodified _KIIDIQEKV_ ENSG00000047410|ENST00000367478|TPR 35.61225514009592 0.0995432151795903 4 [K{I|L}]D{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P 8 5 29.757 0.0 0.0 2.7435 0.0 0.0 0.0 108.09298187719232 108.09298187719232 12.74199678185132 0.0 0.0 0.0 0 0.3252574989159953 0.958607314841775 0.3054621874040891 0.4690370897582285 [K{I|L}]D{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P 2.7435 - 633 1 1.669 184801.3 1.0 5175 4621 9782 HBL1_DMSO_200M_050219_2,9798 HBL1_DMSO_200M_050219_2,9798,KIIDIQEKV True True KIIDIQEKV 53.288707 362.556994616985 1677776.25 9782.0 ENSG00000047410|ENST00000367478|TPR 1.6099849045276642 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9799 53.292 186.0 433620.0 25 0 26004.0 + 13568 HPHPFLNSV 9 121 524.2721160237076 1046.529679114215 2 524.2718994021416 MULTI CID FTMS 0 0 0 9782 309649.78125 0.6350142604021726 -3 0.2870597839355469 17 Unmodified _HPHPFLNSV_ ENSG00000104903|ENST00000264824|LYL1 22.736283301280096 0.2418982879461534 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HPH{I|L}NSV 9 2 + 45.664 0.0 0.0 4.3634 4.3634 70.071 0.0 0.0 0.0 2.5553589614498406 2.5553589614498406 2.5553589614498406 2.5553589614498406 0 0.6237125054200234 1.0457574905606752 0.805462187404089 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HPH{I|L}NSV;[VS]D[WK]{I|L}NW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}PH{I|L}NSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HPH{I|L}GGSV;[VS]D[WK]{I|L}GGW;{[ET]|[MV]}A[WK]{I|L}NW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}[SG]{I|L}NW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}PH{I|L}GGSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{I|L}NPHSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}HPHW 4.3634;4.1192;4.032;3.4835;3.2342;3.1998;3.1853;3.1522;3.1207;2.9673 -;-;-;-;-;-;-;-;-;- 514 1 1.669 68742.1 1.0 5176 4621 9782 HBL1_DMSO_200M_050219_2,9799 HBL1_DMSO_200M_050219_2,9799,HPHPFLNSV False True HPHPFLNSV 53.292303 524.271899402142 6384022.0 9782.0 ENSG00000104903|ENST00000264824|LYL1 7.658365885416667 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9800 53.296 204.0 504740.0 25 0 45652.0 + 12218 GQTQVEIKV 9 142 501.28544038487314 1000.5563278365464 2 501.2875244021416 MULTI CID FTMS 0 0 0 9782 262539.5 0.2848733575791903 -2 0.2016868591308593 18 Unmodified _GQTQVEIKV_ ENSG00000113013|ENST00000297185|HSPA9;ENST00000432228.1_1_2:222827655-222828180:+|nuORF;ENST00000507097.5_1_5:137893182-137909502:-|nuORF 66.45667989310934 0.0225072657982126 4 {[QG]|[NA]}TQVE{I|L}KV 9 0 + 69.997 0.0 0.0 6.9958 6.9958 83.072 0.0 0.0 0.0 13.168242628472129 3.979400086720375 3.979400086720375 3.979400086720375 0 0.8807196863200843 0.6020599913279624 0.3054621874040891 0.75 + + {[QG]|[NA]}TQVE{I|L}KV;{[QG]|[NA]}TQVE{I|L}VK;{[QG]|[NA]}T[AG]VE{I|L}KV;{[QG]|[NA]}T[AG]VE{I|L}VK;[R{M(Oxidation (M))|F}][VP]QQKV 6.9958;6.5981;6.0755;5.6778;0.38853 +;-;-;-;- + 713 + 1 1.669 84538.7 1.0 5177 4621 9782 HBL1_DMSO_200M_050219_2,9800 HBL1_DMSO_200M_050219_2,9800,GQTQVEIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9801 53.311 768.0 391780.0 25 0 40160.0 + 3807 DAILATKV 8 209 415.7535938002949 829.4926346673898 2 415.7533141970634 MULTI CID FTMS 0 0 0 9782 249863.90625 1.0 0 0.0 19 Unmodified _DAILATKV_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 32.78568957990786 0.3549862272178655 4 VEA{I|L}ATKV 8 3 + 80.015 0.0 0.0 9.6463 9.6463 89.103 0.0 0.0 0.0 7.708865128625192 5.247612918420288 5.247612918420288 5.247612918420288 0 0.8778623208748889 0.8860566476931632 0.3494850021680094 0.9476212463643424 VEA{I|L}ATKV;VEA{I|L}ATVK;{I|L}DA{I|L}ATKV;{I|L}DA{I|L}ATVK;VEA{I|L}AVTK;VEA{I|L}A[KS]{I|L};{[DA]|[EG]}{I|L}{I|L}ATKV;VE{I|L}AATKV;{I|L}DA{I|L}AVTK;{[DA]|[EG]}{I|L}{I|L}ATVK 9.6463;9.0136;8.7169;8.0843;7.9726;7.6803;7.5871;7.5334;7.0432;6.9544 -;-;-;-;-;-;+;-;-;- + 861 + 1 1.669 231215.9 1.0 5178 4621 9782 HBL1_DMSO_200M_050219_2,9801 HBL1_DMSO_200M_050219_2,9801,DAILATKV False True DAILATKV 53.310657 415.753314197063 1754401.125 9782.0 ENSG00000169093|ENST00000381317|ASMTL;;nc|ENSG00000292339|O95671-3|ASMTL;;nc|ENSG00000292339|O95671-2|ASMTL 4.71536938349406 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9802 53.324 800.0 281630.0 25 0 30842.0 + 11626 GLAHNPIQI 9 215 481.7744628732732 961.5343728133464 2 481.7741577029228 MULTI CID FTMS 0 0 0 9782 206885.953125 1.0 0 0.0 20 Unmodified _GLAHNPIQI_ REV__ENSG00000060749|ENST00000650167|QSER1;REV__nc|ENSG00000060749|Q2KHR3-2|QSER1;REV__nc|ENSG00000060749|Q2KHR3|QSER1 44.40701690623563 0.0526327925666318 4 {I|L}E[{I|L}A]VA{M(Oxidation (M))|F}S{I|L} 9 -1 + 40.449 0.0 0.0 4.2067 4.2067 69.829 0.0 0.0 0.0 13.545554039594675 9.86307099755183 9.86307099755183 2.9030613027220724 0 0.3494850021680094 0.3872161432802645 0.5 0.0 {I|L}E[{I|L}A]VA{M(Oxidation (M))|F}S{I|L};{I|L}[{I|L}A]EVA{M(Oxidation (M))|F}S{I|L};[H{I|L}]PQ{I|L}NQ{I|L};[H{I|L}]PQN{I|L}Q{I|L};[H{I|L}]P{I|L}QNQ{I|L};[{I|L}P]HQ{I|L}NQ{I|L};{I|L}E[{I|L}A]VA{M(Oxidation (M))|F}TV;[H{I|L}]PQNQ{I|L}{I|L};[{I|L}P]H{I|L}QNQ{I|L};[{I|L}P]HQN{I|L}Q{I|L} 4.2067;3.9048;3.7736;3.5905;3.5905;3.195;3.181;3.0246;3.0119;3.0119 -;-;-;-;-;-;-;-;-;- 7362 + 1 1.669 169886.2 0.9300000071525574 5179 4621 9782 HBL1_DMSO_200M_050219_2,9802 HBL1_DMSO_200M_050219_2,9802,GLAHNPIQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9804 53.329 6.5 9157300.0 25 0 1157700.0 + 44909 YPPPEVRNI 9 66 542.7934218667502 1083.5722908003004 2 542.7935058474541 MULTI CID FTMS 0 0 0 9803 6893110.0 0.3721266322456374 10 -0.7943878173828125 1 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 16.565877749689598 0.3882643987948875 4 YPP[EP]V 6 3 54.085 0.0 0.0 4.9914 0.0 0.0 0.0 398.2147616022094 398.2147616022094 47.09569063612989 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + YPP[EP]V 4.9914 + + 29 + 1 1.667 52324.2 1.0 5180 4622 9803 HBL1_DMSO_200M_050219_2,9804 HBL1_DMSO_200M_050219_2,9804,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9805 53.33 9.5 5921600.0 25 0 1301900.0 + 15409 IPPDQQRLI 9 62 540.3146414642733 1078.6147299953466 2 540.3147460818291 MULTI CID FTMS 0 0 0 9803 5075452.0 0.2052294187781579 13 -0.9587669372558594 2 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 13.042465956692816 0.4836390050082244 4 {I|L}PPD 4 5 56.186 0.0 0.0 5.2091 0.0 0.0 0.0 653.3747531996256 653.3747531996256 50.70107520596089 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPD 5.2091 + + 16 + 1 1.667 51097.4 1.0 5181 4622 9803 HBL1_DMSO_200M_050219_2,9805 HBL1_DMSO_200M_050219_2,9805,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9806 53.331 25.0 3281900.0 25 0 223800.0 + 4964 DGPRVFRV 8 84 315.8473737245311 944.5202917737934 3 315.8470031619072 MULTI CID FTMS 0 0 0 9803 2077071.375 0.1599650549592391 3 -0.2603797912597656 3 Unmodified _DGPRVFRV_ ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF;nc|ENSG00000179115|Q9Y285-2|FARSA 36.04419817259434 0.3004715606373109 4 DGVPRV{M(Oxidation (M))|F}R 8 2 + 79.948 0.0 0.0 8.4644 8.4644 79.062 0.0 0.0 0.0 30.000000000000007 1.3040381774553964 1.3040381774553964 0.1230450566754512 0 0.2215141619232908 2.0 0.0 0.2887254899964357 DGVPRV{M(Oxidation (M))|F}R;DGVPR{M(Oxidation (M))|F}VR;DGVPR{M(Oxidation (M))|F}RV;DG[RP]VV{M(Oxidation (M))|F}R;DG[RP]V{M(Oxidation (M))|F}VR;DG[RP]V{M(Oxidation (M))|F}RV;DRPGVV{M(Oxidation (M))|F}R;DRPGV{M(Oxidation (M))|F}VR;DRPGV{M(Oxidation (M))|F}RV;DVGPRV{M(Oxidation (M))|F}R 8.4644;8.4514;8.3263;6.7979;6.7849;6.6598;6.1124;6.0994;5.9743;5.7937 -;-;-;-;-;+;-;-;-;- + 189 + 1 1.667 72722.1 1.0 5182 4622 9803 HBL1_DMSO_200M_050219_2,9806 HBL1_DMSO_200M_050219_2,9806,DGPRVFRV False True DGPRVFRV 53.331182 315.847003161907 323259288.0 9803.0 ENST00000592662.5_1_19:13039347-13044510:-|nuORF;;ENSG00000179115|ENST00000314606|FARSA;;nc|ENSG00000179115|Q9Y285-2|FARSA 4.273451209068298 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9807 53.332 23.0 1798600.0 25 0 174030.0 + 41605 VPPLATNTV 9 85 456.2635930417542 910.5126331503084 2 456.2639343142509 MULTI CID FTMS 0 0 0 9803 1937332.75 0.2964529233814587 11 -0.8513107299804688 4 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 36.04419817259434 0.0971720506436186 4 [{I|L}P]PAVTNTV 9 3 + 41.445 0.0 0.0 4.5519 4.5519 69.106 0.0 0.0 0.0 12.372310960715716 17.88892063127431 12.372310960715716 1.7609125905568064 0 0.4929928190999391 1.154901959985743 0.3252574989159953 0.0 [{I|L}P]PAVTNTV;[{I|L}P]APVTNTV;[{I|L}P]PAVTGGTV;[{I|L}P]APVTGGTV;[VP][VS][VP]NTV;[VP][VS][NP]VTV;[{I|L}P]PA{[QS]|[NT]}VTV;[{I|L}P]AT[VP]NTV;[{I|L}P]AP{[QS]|[NT]}VTV;[{I|L}P]AT[NP]VTV 4.5519;4.3585;3.5406;3.3472;2.9154;2.5582;2.4659;2.2991;2.2725;1.9419 -;-;-;-;-;-;-;-;-;- 122 1 1.667 38806.7 1.0 5183 4622 9803 HBL1_DMSO_200M_050219_2,9807 HBL1_DMSO_200M_050219_2,9807,VPPLATNTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9808 53.334 29.0 2429800.0 25 0 244390.0 + + 5744 AFPDGRSSF 9 77 492.2329243734351 982.4512958136702 2 492.2332641482353 MULTI CID FTMS 0 0 0 9803 1224921.875 1.0 0 0.0 5 Unmodified _DPMQIDKH_ ENSG00000110446|ENST00000227880|SLC15A3 16.942295170755138 0.6606234159769251 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{[CP]|[EA]} 8 -1 + 20.608 0.0 0.0 2.0976 2.0976 76.714 0.0 0.0 0.0 0.915149811213496 5.546218740408902 0.915149811213496 16.478174818886373 0 0.3494850021680094 1.2218487496163564 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM}H{[TV]|[{I|L}S]} 2.0976;0.42035 -;- 110 1 1.667 59815.7 1.0 5184 4622 9803 HBL1_DMSO_200M_050219_2,9808 HBL1_DMSO_200M_050219_2,9808,DPMQIDKH False False AFPDGRSSF 53.33354 492.233264148235 23990084.0 9803.0 ENSG00000110446|ENST00000227880|SLC15A3 2.9031490087509155 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9809 53.335 41.0 1016500.0 25 0 132230.0 + 45793 YYLNEQGDRVY 11 39 710.3301641461446 1418.6457753590892 2 710.3310424685478 MULTI CID FTMS 0 0 0 9803 1124029.0 0.4917020852179969 1 -0.0544929504394531 6 Unmodified _YYLNEQGDRVY_ ENSG00000182117|ENST00000328848|NOP10 35.61225514009592 0.279986979807413 4 YY{I|L}NEQ 6 5 81.146 0.0 0.0 5.72 0.0 0.0 0.0 605.2700289361936 605.2700289361936 74.15668775632469 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 1.274227503252014 + YY{I|L}NEQ 5.72 + + 27 + 1 1.667 36981.8 1.0 5185 4622 9803 HBL1_DMSO_200M_050219_2,9809 HBL1_DMSO_200M_050219_2,9809,YYLNEQGDRVY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9810 53.336 48.0 1391900.0 25 0 201620.0 + 36177 SVVPDVRSV 9 62 479.271890235565 956.52922753793 2 479.2718383669853 MULTI CID FTMS 0 0 0 9803 1036170.1875 0.0942711555081204 -4 0.3751373291015625 7 Unmodified _SVVPDVRSV_ chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1;ENSG00000073584|ENST00000348513|SMARCE1;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;nc|ENSG00000073584|Q969G3-2|SMARCE1;nc|ENSG00000073584|Q969G3-3|SMARCE1;nc|ENSG00000073584|Q969G3-4|SMARCE1;nc|ENSG00000073584|Q969G3-5|SMARCE1;nc|ENSG00000073584|Q969G3-6|SMARCE1 18.373094154950223 0.3393451798331396 4 [VS]VPDV 6 3 55.406 0.0 0.0 5.7924 0.0 0.0 0.0 357.1885164850219 357.1885164850219 48.4163750790475 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + [VS]VPDV 5.7924 + + 50 + 1 1.667 56096.6 1.0 5186 4622 9803 HBL1_DMSO_200M_050219_2,9810 HBL1_DMSO_200M_050219_2,9810,SVVPDVRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9811 53.338 68.0 912230.0 25 0 179560.0 + 45812 YYNLQGISH 9 81 547.7666560641021 1093.518759195004 2 547.7671386599541 MULTI CID FTMS 0 0 0 9803 844429.9375 1.0 0 0.0 8 Unmodified _YYNLQGISH_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 85.27202061508552 0.0162393975915471 4 YYN{I|L}QG{I|L}SH 9 0 + 95.724 0.0 0.0 8.7537 8.7537 93.023 0.0 0.0 0.0 76.84955642535897 14.973024840566469 14.973024840566469 9.208187539523747 0 0.8494850021680094 2.0 1.3807196863200843 0.8807196863200843 + + YYN{I|L}QG{I|L}SH;YYGG{I|L}QG{I|L}SH;YYN{I|L}[AG]G{I|L}SH;YYGG{I|L}[AG]G{I|L}SH;YYN{I|L}[{I|L}T][NG]H 8.7537;7.9116;7.4544;6.2682;4.5434 +;-;-;-;- + 234 + 1 1.667 50971.4 1.0 5187 4622 9803 HBL1_DMSO_200M_050219_2,9811 HBL1_DMSO_200M_050219_2,9811,YYNLQGISH True True YYNLQGISH 53.337634 547.767138659954 5581367.0 9803.0 ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 6.19085963567098 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9812 53.339 67.0 988300.0 25 0 98655.0 + 33219 SFLRGTTSY 9 86 516.2612865228263 1030.5080201124524 2 516.2618896365166 MULTI CID FTMS 0 0 0 9803 848254.25 0.6486786226478707 -1 0.0880775451660156 9 Unmodified _SFLRGTTSY_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 47.594388314883695 0.0456443387682827 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R{[SA]|[TG]}TSY 9 0 + 60.396 0.0 0.0 5.8608 5.8608 81.821 0.0 0.0 0.0 19.90681220981664 39.74977412971143 19.90681220981664 6.478174818886373 0 1.774227503252014 1.6989700043360187 0.7302046884880937 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R{[SA]|[TG]}TSY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R{[SA]|[TG]}GMY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R{[QS]|[NT]}MY;[HM][HK]KTSY;{[CT]|[{M(Oxidation (M))|F}G]}[RH][HK]SY;{NN|[MP]|[D{I|L}]|[EV]}RM[KT][HM];[QP]SG{[SA]|[TG]}R{I|L}{[ES]|[DT]|[{I|L}C]};{[VA]|[{I|L}G]}[KG]C(Carbamidomethyl (C))[KT][HM] 5.8608;5.2322;4.7141;4.0854;2.5111;1.4929;1.4575;0.47116;0.01641 +;-;-;-;-;-;-;-;- + 186 1 1.667 56790.0 1.0 5188 4622 9803 HBL1_DMSO_200M_050219_2,9812 HBL1_DMSO_200M_050219_2,9812,SFLRGTTSY True True SFLRGTTSY 53.339267 516.261889636517 20157308.0 9803.0 nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;;ENSG00000100991|ENST00000252015|TRPC4AP 6.715017954508464 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9813 53.341 83.0 1702800.0 25 0 334670.0 + 14942 ILMEHIHKL 9 108 567.3285504409022 1132.6425479486045 2 567.8309203982353 MULTI CID FTMS 0 0 0 9803 726461.875 0.4929277859366565 -1 0.0880775451660156 10 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 37.07464296494664 0.0915153923251136 4 {I|L}{I|L}MEH{I|L}H{I|L}K 9 2 + 61.485 0.0 0.0 5.4285 5.4285 87.945 0.0 0.0 0.0 34.69282954741498 16.444842611056245 16.444842611056245 33.25380025699395 0 1.174742501084005 2.0 0.3494850021680094 0.9559771852360796 {I|L}{I|L}MEH{I|L}H{I|L}K;{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQ{I|L}K;[KP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}H{I|L}H{I|L}K;{I|L}{I|L}[YV]EQQ{I|L}K;{[YC]|[HE]}M{I|L}HK{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}HK{I|L}{I|L}{I|L};{[YC]|[HE]}M{I|L}H{I|L}K{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}H{I|L}K{I|L}{I|L};{[YC]|[HE]}M{I|L}{I|L}HK{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{I|L}HK{I|L}{I|L} 5.4285;2.4925;2.2551;1.8956;1.8412;1.7332;1.1542;1.0462;0.87321;0.76521 -;-;-;-;-;-;-;-;-;- 500 + 1 1.667 108231.0 1.0 5189 4622 9803 HBL1_DMSO_200M_050219_2,9813 HBL1_DMSO_200M_050219_2,9813,ILMEHIHKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9814 53.343 69.0 698950.0 25 0 52671.0 + 35332 STAAKIMGV 9 73 439.2440340794108 876.4735152256216 2 439.2443420290947 MULTI CID FTMS 0 0 0 9803 705811.3125 0.569951364539447 -2 0.1984024047851562 11 Unmodified _STAAKIMGV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 44.40701690623563 0.0526327925666318 4 {[MG]|[TS]}AAK{I|L}MGV 9 0 + 40.247 0.0 0.0 4.5919 4.5919 75.353 0.0 0.0 0.0 12.912488223001423 1.533117924320578 1.533117924320578 5.406075122407685 0 0.7302046884880937 0.7695510786217261 0.0 0.0 + + {[MG]|[TS]}AAK{I|L}MGV;{[MG]|[TS]}AAK{I|L}{[WT]|[RM]};{[MG]|[TS]}ARR{[WT]|[RM]};{[MG]|[TS]}AAK{[WT]|[RM]}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RRMGV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AK[R{M(Oxidation (M))|F}]P 4.5919;3.9751;2.8801;2.1725;1.4454;1.3317 +;-;-;-;-;- + 275 + 1 1.667 43405.9 1.0 5190 4622 9803 HBL1_DMSO_200M_050219_2,9814 HBL1_DMSO_200M_050219_2,9814,STAAKIMGV True True STAAKIMGV 53.342788 439.244342029095 18033478.0 9803.0 ENST00000466404.5_1_19:54621832-54631576:+|nuORF;;nc|ENSG00000105618|Q8WWY3-3|PRPF31;;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;;nc|ENSG00000105618|Q8WWY3-2|PRPF31;;ENSG00000105618|ENST00000321030|PRPF31;;nc|ENSG00000105618|Q8WWY3-4|PRPF31 6.076403458913167 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9815 53.344 47.0 947710.0 25 0 73276.0 + -1 LPSTTVCLV 9 89 495.2702185662616 988.5258841993232 2 495.2705566287041 MULTI CID FTMS 0 0 0 9803 678328.9375 0.8665470792011065 -1 0.0880775451660156 12 Carbamidomethyl (C) _LPSTTVC(Carbamidomethyl (C))LV_ REV__ENST00000330636.8_2_6:5109382-5109484:-|nuORF 23.1484247019978 0.2366544122328345 4 {I|L}P 2 -1 41.013 0.0 0.0 4.1489 0.0 0.0 0.0 775.3695772760374 775.3695772760374 23.56106265242992 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {I|L}P 4.1489 + + 171 + 1 1.667 39238.1 1.0 5191 4622 9803 HBL1_DMSO_200M_050219_2,9815 HBL1_DMSO_200M_050219_2,9815,LPSTTVCLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9816 53.345 46.0 994030.0 25 0 106040.0 + 22083 LPPPTPSQI 9 86 475.27156135390464 948.5285697746092 2 475.2715637087822 MULTI CID FTMS 0 0 0 9803 657003.625 0.41122814061828 -11 0.866973876953125 13 Unmodified _LPPPTPSQI_ ENSG00000083223|ENST00000375963|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 32.30548876998284 0.1201446275138228 4 [{I|L}P][YT][KS]Q{I|L} 8 3 + 31.717 0.0 0.0 3.3438 3.3438 66.46 0.0 0.0 0.0 2.3805218275135296 12.113037394097432 2.3805218275135296 2.3805218275135296 0 0.2614393726401688 2.0 0.5 0.0 [{I|L}P][YT][KS]Q{I|L};{[HG]|PP}TP{I|L}[PS]Q{I|L};{[HG]|PP}TPS[{I|L}P]Q{I|L};{[HG]|PP}TP{I|L}[PS][AG]{I|L};[AG]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]Q{I|L};[AG]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]K{I|L};{[HG]|PP}TPS[{I|L}P][AG]{I|L};[Q{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]Q{I|L};[Q{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]K{I|L};[VP][YK]{[DS]|[MA]|[CV]|TT}Q{I|L} 3.3438;3.0929;2.1361;2.1221;1.7082;1.7082;1.1653;1.1453;1.1453;0.54014 -;-;-;-;-;-;-;-;-;- 223 1 1.667 43035.6 1.0 5192 4622 9803 HBL1_DMSO_200M_050219_2,9816 HBL1_DMSO_200M_050219_2,9816,LPPPTPSQI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9817 53.348 104.0 633750.0 25 0 137890.0 + 14928 ILMEHIHKL 9 96 383.8863597403589 0 383.8864623904228 PEAK CID FTMS 0 0 0 9803 571656.9375 0.3900000383752924 -4 0.3751373291015625 14 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 49.52724829834842 0.0329615201929619 4 {I|L} 1 8 6.9897 0.0 0.0 0.91278 0.0 0.0 567.5844127406802 82.06699548892811 649.6514082296084 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.91278 + + 55 + 1 1.667 60420.3 1.0 5193 4622 9803 HBL1_DMSO_200M_050219_2,9817 HBL1_DMSO_200M_050219_2,9817,ILMEHIHKL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9818 53.35 140.0 596500.0 25 0 89764.0 + -1 SHVAVENALG 10 104 519.7641816929032 1037.5138104526063 2 519.7649413943291 MULTI CID FTMS 0 0 0 9803 516224.78125 0.450484408932855 -2 0.1984024047851562 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SHVAVENALG_ ENST00000480592.5_1_X:41193505-41196960:+|nuORF;nc|ENSG00000215301|O00571-2|DDX3X;ENSG00000215301|ENST00000644876|DDX3X 24.99096001346401 0.4071966087057876 4 {[YC]|[HE]}VAVENA{[VA]|[{I|L}G]} 10 -1 + 53.901 0.0 0.0 5.1952 5.1952 81.558 0.0 0.0 0.0 9.259687322722812 45.228787452803374 9.259687322722812 9.164539485499256 0 0.5 0.0 0.3494850021680094 0.0 {[YC]|[HE]}VAVENA{[VA]|[{I|L}G]};{[YC]|[HE]}VAVEGGA{[VA]|[{I|L}G]};{[YC]|[HE]}VAV{[QG]|[NA]}E{[VA]|[{I|L}G]};[HA]{NN|[MP]|[D{I|L}]|[EV]}VENA{[VA]|[{I|L}G]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NEV[{M(Oxidation (M))|F}T]{[VA]|[{I|L}G]};[{I|L}A][HD]VENA{[VA]|[{I|L}G]};[HA]{NN|[MP]|[D{I|L}]|[EV]}VEGGA{[VA]|[{I|L}G]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GGEV[{M(Oxidation (M))|F}T]{[VA]|[{I|L}G]};{[YC]|[HE]}V[PG]CRA{[VA]|[{I|L}G]};[{I|L}A][HD]VEGGA{[VA]|[{I|L}G]} 5.1952;4.3119;3.3879;3.1758;3.0018;2.7609;2.2925;2.1143;2.0859;1.8776 -;-;-;-;-;-;-;-;-;- 179 1 1.667 68129.1 1.0 5194 4622 9803 HBL1_DMSO_200M_050219_2,9818 HBL1_DMSO_200M_050219_2,9818,SHVAVENALG False False SHVAVENALG 53.35035 519.764941394329 17146270.0 9803.0 ENST00000480592.5_1_X:41193505-41196960:+|nuORF;;nc|ENSG00000215301|O00571-2|DDX3X;;ENSG00000215301|ENST00000644876|DDX3X 9.071166356404625 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9819 53.355 223.0 358050.0 25 0 35471.0 + 18227 KVFNDYTAV 9 116 528.7717201881036 1055.528887443007 2 528.7720825076103 MULTI CID FTMS 0 0 0 9803 410185.09375 0.291894435800282 -2 0.1984024047851562 16 Unmodified _KVFNDYTAV_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 45.69961567697781 0.0497987121815769 4 NDYTAV 6 3 54.914 0.0 0.0 5.2025 0.0 0.0 374.23277480293126 0.0 374.23277480293126 0.0 40.344858742902616 0.0 0.0 0 1.0 0.0 0.5 0.805462187404089 + NDYTAV 5.2025 + + 820 1 1.667 71830.2 1.0 5195 4622 9803 HBL1_DMSO_200M_050219_2,9819 HBL1_DMSO_200M_050219_2,9819,KVFNDYTAV True True KVFNDYTAV 53.354567 528.77208250761 9889634.0 9803.0 ENSG00000117298|ENST00000374893|ECE1;;nc|ENSG00000117298|P42892-3|ECE1;;nc|ENSG00000117298|P42892-4|ECE1;;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;;nc|ENSG00000117298|P42892-2|ECE1 6.4636861483256025 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9820 53.359 212.0 457340.0 25 0 25743.0 -1 LPEICTQCP 9 158 530.7435245140377 1059.4724960948754 2 530.7439453005791 MULTI CID FTMS 0 0 0 9803 402334.53125 0.4081858498966529 -13 0.9558982849121094 17 Carbamidomethyl (C) _LPEIC(Carbamidomethyl (C))TQCP_ ENSG00000138085|ENST00000380171|ATRAID;ENST00000484646.1_1_2:27435071-27436167:+|nuORF;nc|ENSG00000138085|Q6UW56-3|ATRAID 26.88365393820708 0.1891292719743517 4 [{I|L}P]EPGNSV 8 -1 55.633 0.0 0.0 5.251 0.0 0.0 0.0 263.0530374369254 263.0530374369254 37.58507695061317 0.0 0.0 0.0 0 1.0 2.0 0.3807196863200844 0.2887254899964357 [{I|L}P]EPGNSV 5.251 - 1655 1 1.667 83225.4 1.0 5196 4622 9803 HBL1_DMSO_200M_050219_2,9820 HBL1_DMSO_200M_050219_2,9820,LPEICTQCP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9821 53.361 103.0 564030.0 25 0 79678.0 + 22038 LPPPPPPAM 9 84 458.751710776598 915.488868619996 2 458.7514526247978 MULTI CID FTMS 0 0 0 9803 399963.34375 0.0904305825710278 42 -3.728218078613281 18 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 4 [YK]{I|L}PP 5 7 31.823 0.0 0.0 3.476 0.0 0.0 0.0 314.1171712936477 314.1171712936477 14.832881222565248 0.0 0.0 0.0 0 1.2614393726401687 0.0 0.0 0.0 [YK]{I|L}PP 3.476 - 210 1 1.667 53625.7 1.0 5197 4622 9803 HBL1_DMSO_200M_050219_2,9821 HBL1_DMSO_200M_050219_2,9821,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9822 53.375 800.0 309890.0 25 0 63202.0 -1 0 62 1123.4484671750083 3367.323572125225 3 1123.783007800579 MULTI CID FTMS 0 0 0 9803 332102.5 0.4906628312221582 -2 0.1984024047851562 19 4 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYG 5 -1 21.938 0.0 0.0 0.6515 0.0 0.0 1311.4387842624162 1362.6072484264275 2674.046032688844 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYG 0.6515 - 54 + 1 1.667 197811.9 0.9900000095367432 5198 4622 9803 HBL1_DMSO_200M_050219_2,9822 HBL1_DMSO_200M_050219_2,9822, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9823 53.379 228.0 447440.0 25 0 40018.0 -1 0 148 338.19388011067576 337.1866036440758 1 338.1938659548759 MULTI CID FTMS 0 0 0 9803 270974.6875 1.0 0 0.0 20 4 M 1 -1 3.6536 0.0 0.0 1.0835 0.0 0.0 121.05995371907422 82.06698023013905 203.12693394921325 0.0 0.0 0.0 0.0 0 0.2059771852360797 0.0 0.0 0.0 M 1.0835 - 8 + 1 1.667 81293.4 1.0 5199 4622 9803 HBL1_DMSO_200M_050219_2,9823 HBL1_DMSO_200M_050219_2,9823, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9825 53.383 60.0 851970.0 25 0 81736.0 -1 MDNITRQNQFY 11 55 744.3308868787516 1486.647220824303 2 744.3317138552666 MULTI CID FTMS 0 0 0 9824 659654.0625 0.4069252824948718 2 -0.2058868408203125 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 4 EAQQNA{M(Oxidation (M))|F}Y 8 -1 56.829 0.0 0.0 3.8226 0.0 0.0 517.229784080275 0.0 517.229784080275 0.0 43.33404095816413 0.0 0.0 0 0.718765315847925 0.0 0.0 0.8494850021680094 EAQQNA{M(Oxidation (M))|F}Y 3.8226 - 454 1 1.667 41259.4 1.0 5200 4623 9824 HBL1_DMSO_200M_050219_2,9825 HBL1_DMSO_200M_050219_2,9825,MDNITRQNQFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9826 53.386 129.0 618570.0 25 0 41566.0 8765 EVSMVLTGA 9 106 453.7328751560117 905.4511973788236 2 453.7330505251884 MULTI CID FTMS 0 0 0 9824 283691.15625 1.0 0 0.0 2 Unmodified _EVSMVLTGA_ ENSG00000151348|ENST00000533608|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2 23.1484247019978 0.2366544122328345 4 {[VA]|[{I|L}G]}{M(Oxidation (M))|F} 3 7 17.932 0.0 0.0 1.9804 0.0 0.0 0.0 585.2868656739985 585.2868656739985 1.74381402923105 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F} 1.9804 - 242 1 1.667 66596.8 1.0 5201 4623 9824 HBL1_DMSO_200M_050219_2,9826 HBL1_DMSO_200M_050219_2,9826,EVSMVLTGA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9827 53.387 25.0 3037600.0 25 0 428410.0 + 14943 ILMEHIHKL 9 81 567.3285504409022 1132.6425479486045 2 567.3289672732353 MULTI CID FTMS 0 0 0 9824 2259885.5 1.0 0 0.0 3 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 44.391923383255 0.0526658857881241 4 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 88.906 0.0 0.0 7.8494 7.8494 96.252 0.0 0.0 0.0 54.74423738776309 9.137342758552691 9.137342758552691 34.07767232298852 0 1.579689690656103 2.0 0.8494850021680094 0.0 + + {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQK{I|L};{I|L}{I|L}[YV]EQQK{I|L};{I|L}{I|L}MM[VG]M{I|L}{I|L}{I|L};[HK]{I|L}HEM{I|L}{I|L}{I|L};[H{I|L}]EMHK{I|L}{I|L}{I|L};[H{I|L}]KHEM{I|L}{I|L}{I|L};[H{I|L}]EM{I|L}{I|L}HK{I|L};[H{I|L}]EM{I|L}[HK]{I|L}{I|L};[H{I|L}]E[HK]M{I|L}{I|L}{I|L} 7.8494;4.8407;4.289;3.3572;3.0693;2.8036;2.8036;2.1149;1.8565;1.5693 +;-;-;-;-;-;-;-;-;- + 347 + 1 1.667 62825.2 1.0 5202 4623 9824 HBL1_DMSO_200M_050219_2,9827 HBL1_DMSO_200M_050219_2,9827,ILMEHIHKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9828 53.389 60.0 765670.0 25 0 84092.0 -1 CSTISVYCN 9 85 523.7157038239675 1045.4168547147349 2 523.7159911990166 MULTI CID FTMS 0 0 0 9824 564454.75 0.3151789611089214 -1 0.0544929504394531 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))STISVYCN_ ENST00000567840.5_1_15:43132615-43212683:-|nuORF 7.289230182591677 0.6602208344931196 4 {[QN]|[E{I|L}]|[KN]}N[YQ]YCN 8 -1 {[QN]|[E{I|L}]|[KN]}N[YQ]Y + + 23.628 6.0924 0.75182 2.2601 2.2601 44.806 0.0 0.0 0.0 0.0 8.662421094978399 0.0 0.0 0 0.0 0.0 0.0 0.566901560044258 {[QN]|[E{I|L}]|[KN]}N[YQ]YCN 2.2601 - 377 + 1 1.667 41556.6 1.0 5203 4623 9824 HBL1_DMSO_200M_050219_2,9828 HBL1_DMSO_200M_050219_2,9828,CSTISVYCN False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9829 53.401 691.0 264570.0 25 0 22498.0 -1 CYGRYWSYGFY 11 114 761.3149585346075 1520.615364136015 2 761.3158447146416 MULTI CID FTMS 0 0 0 9824 290150.34375 1.0 0 0.0 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))YGRYWSYGFY_ ENSG00000244624|ENST00000334664|KRTAP20-1 8.155526934196011 0.8366696279279818 4 [HD][PS]DEAQQNA{M(Oxidation (M))|F}Y 13 -1 + 79.242 0.0 0.0 5.2111 5.2111 81.24 0.0 0.0 0.0 0.9332452038729144 50.3800967943078 0.9332452038729144 9.072459467631006 0 0.8935078169319297 0.8860566476931632 0.6989700043360187 1.274227503252014 [HD][PS]DEAQQNA{M(Oxidation (M))|F}Y;[HD][PS]DEAQ[AG]NA{M(Oxidation (M))|F}Y;[HD][PS]DEAQQGGA{M(Oxidation (M))|F}Y;[HD][PS]DEA[AG]QNA{M(Oxidation (M))|F}Y;[HS][DP]DEAQQNA{M(Oxidation (M))|F}Y;[HS][HS]CEAQQNA{M(Oxidation (M))|F}Y;[HD][PS]DEAAANNA{M(Oxidation (M))|F}Y;[HS][DP]DEAQQGGA{M(Oxidation (M))|F}Y;[HS][DP]DEA[AG]QNA{M(Oxidation (M))|F}Y;[HS][DP]DEAQ[AG]NA{M(Oxidation (M))|F}Y 5.2111;4.6145;4.6145;4.6145;4.6056;4.4076;4.1867;4.009;4.009;4.009 -;-;-;-;-;-;-;-;-;- 4903 1 1.667 131187.5 1.0 5204 4623 9824 HBL1_DMSO_200M_050219_2,9829 HBL1_DMSO_200M_050219_2,9829,CYGRYWSYGFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9830 53.412 660.0 456210.0 25 0 107370.0 + 32402 RYVPRASYF 9 157 579.8065138407006 1157.5984747482012 2 579.8071777224541 MULTI CID FTMS 0 0 0 9824 278008.4375 0.1451804301675255 -3 0.2528953552246094 6 Unmodified _RYVPRASYF_ ENSG00000112576|ENST00000372991|CCND3;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;nc|ENSG00000112576|P30281-3|CCND3 39.94969957227396 0.0757326808254658 4 RYV 3 6 36.0 0.0 0.0 3.1099 0.0 0.0 0.0 736.3445207286478 736.3445207286478 6.558878729673943 0.0 0.0 0.0 0 0.9247425010840048 0.958607314841775 0.0 0.0 + RYV 3.1099 + + 875 + 1 1.667 227116.7 1.0 5205 4623 9824 HBL1_DMSO_200M_050219_2,9830 HBL1_DMSO_200M_050219_2,9830,RYVPRASYF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9831 53.425 722.0 246530.0 25 0 19513.0 + 3348 AYNTNENML 9 202 535.2355223832774 1068.456491833355 2 535.2350341677666 MULTI CID FTMS 0 0 0 9824 228681.875 1.0 0 0.0 7 Unmodified _AYNTNENML_ ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3 54.773552608820026 0.0299037012502309 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GG[HQ]{I|L} 7 6 30.818 0.0 0.0 2.8844 0.0 0.0 0.0 339.0959850513279 339.0959850513279 1.008637071100278 0.0 0.0 0.0 0 0.0 2.0 0.805462187404089 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GG[HQ]{I|L} 2.8844 - 2536 1 1.667 137493.5 1.0 5206 4623 9824 HBL1_DMSO_200M_050219_2,9831 HBL1_DMSO_200M_050219_2,9831,AYNTNENML True True AYNTNENML 53.42471 535.235034167767 1494095.75 9824.0 nc|ENSG00000112249|Q8N3C0-4|ASCC3;;ENSG00000112249|ENST00000369162|ASCC3 2.4635335306326547 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9832 53.438 739.0 278640.0 25 0 36698.0 -1 SMCAKCVRDWI 11 113 692.8145430418978 1383.6145331505954 2 692.8162719607353 MULTI CID FTMS 0 0 0 9824 225067.8125 1.0 0 0.0 8 Carbamidomethyl (C),Oxidation (M) _SM(Oxidation (M))CAKC(Carbamidomethyl (C))VRDWI_ ENST00000431295.1_1_1:153968319-153968433:+|nuORF 8.155526934196011 0.8366696279279818 4 VSYE 4 -1 37.735 0.0 0.0 2.7273 0.0 0.0 408.11057120564857 494.2734774225219 902.3840486281704 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 VSYE 2.7273 - 278 + 1 1.667 148788.4 1.0 5207 4623 9824 HBL1_DMSO_200M_050219_2,9832 HBL1_DMSO_200M_050219_2,9832,SMCAKCVRDWI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9833 53.444 349.0 254420.0 25 0 29738.0 + -1 LPARLTQV 8 123 449.27811464591 448.27083817931 1 449.2799560427666 MULTI CID FTMS 0 0 0 9824 221868.296875 1.0 0 0.0 9 ENST00000497039.1_1_2:65298581-65300050:+|nuORF;ENSG00000011523|ENST00000377990|CEP68 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV 4 -1 + 18.116 0.0 0.0 4.0414 4.0414 81.112 0.0 0.0 0.0 4.136890462689138 -1.2691846597185474 -1.2691846597185474 18.11629054940952 0 0.242992819099939 1.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AV 4.0414 - 64 1 1.667 70626.9 1.0 5208 4623 9824 HBL1_DMSO_200M_050219_2,9833 HBL1_DMSO_200M_050219_2,9833, False False LPARLTQV 53.443825 449.279956042767 1667307.5 9824.0 ENST00000497039.1_1_2:65298581-65300050:+|nuORF;;ENSG00000011523|ENST00000377990|CEP68 2.429762283960978 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9834 53.458 800.0 349310.0 25 0 47017.0 + -1 YFYGGLMTTQF 11 135 672.3042163728708 1342.5938798125414 2 672.3043090701103 MULTI CID FTMS 0 0 0 9824 185994.609375 0.3434223199127017 -12 0.921466827392578 10 Oxidation (M) _YFYGGLM(Oxidation (M))TTQF_ REV__ENSG00000156006|ENST00000286479|NAT2 32.78568957990786 0.3235288296534633 4 [DP]RVSVCE{M(Oxidation (M))|F}[YE] 11 -1 + 40.408 0.0 0.0 3.0097 3.0097 62.22 0.0 0.0 0.0 2.0620890153558094 8.034507832983579 2.0620890153558094 0.536049848239351 0 0.7302046884880937 1.2218487496163564 0.805462187404089 0.9247425010840048 [DP]RVSVCE{M(Oxidation (M))|F}[YE];[DP]RVSVCEEY{M(Oxidation (M))|F};[{I|L}V][QT]M[{M(Oxidation (M))|F}T]DNQ{M(Oxidation (M))|F};[Q{I|L}]S{I|L}M[{M(Oxidation (M))|F}T]DNQ{M(Oxidation (M))|F};[QT]V{I|L}M[{M(Oxidation (M))|F}T]DNQ{M(Oxidation (M))|F};[{I|L}V]{I|L}Q{[CP]|[EA]}CE{M(Oxidation (M))|F}[YE];[{I|L}V]{I|L}Q{[CP]|[EA]}CEEY{M(Oxidation (M))|F};[Q{I|L}]TVM[{M(Oxidation (M))|F}T]DNQ{M(Oxidation (M))|F};[DP][Y{M(Oxidation (M))|F}]{[RE]|[WV]}QNQ{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KT]Q{M(Oxidation (M))|F}Y{M(Oxidation (M))|F} 3.0097;2.9698;2.585;2.4579;2.2663;2.2516;2.2117;2.2028;2.0843;2.0217 -;-;-;-;-;-;-;-;-;- 2287 1 1.667 200858.5 1.0 5209 4623 9824 HBL1_DMSO_200M_050219_2,9834 HBL1_DMSO_200M_050219_2,9834,YFYGGLMTTQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9835 53.466 384.0 120680.0 25 0 7684.5 -1 0 55 925.4283341898752 1848.8421154465505 2 925.9285156130792 MULTI CID FTMS 0 0 0 9824 176059.09375 0.6532395173261974 -5 0.4296302795410156 11 4 {[QS]|[NT]}{I|L}PC(Carbamidomethyl (C)) 5 -1 18.823 0.0 0.0 1.0181 0.0 0.0 0.0 1260.556873097194 1260.556873097194 2.625305739907805 0.0 0.0 0.0 0 0.5 0.0 0.2396518287104437 0.0 {[QS]|[NT]}{I|L}PC(Carbamidomethyl (C)) 1.0181 - 162 1 1.667 37698.5 1.0 5210 4623 9824 HBL1_DMSO_200M_050219_2,9835 HBL1_DMSO_200M_050219_2,9835, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9836 53.48 800.0 219400.0 25 0 15466.0 + + 15116 IRLENEIQT 9 160 558.3084076216184 1114.6022623100366 2 558.3077270388603 MULTI CID FTMS 0 0 0 9824 179239.203125 0.0872938266823382 -9 0.598846435546875 12 Unmodified _INAPVPYIQT_ ENSG00000186395|ENST00000269576|KRT10;P13645 39.94969957227396 0.1580982266129622 4 {M(Oxidation (M))|F}Q{I|L}TN 5 -1 41.943 0.0 0.0 3.7631 0.0 0.0 0.0 508.2886750221954 508.2886750221954 11.035312760830394 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.3807196863200844 {M(Oxidation (M))|F}Q{I|L}TN 3.7631 - 1186 + 1 1.667 135624.4 0.9900000095367432 5211 4623 9824 HBL1_DMSO_200M_050219_2,9836 HBL1_DMSO_200M_050219_2,9836,INAPVPYIQT False False IRLENEIQT 53.479856 558.30772703886 1261741.875 9824.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 4.011605660120647 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9837 53.494 800.0 217310.0 25 0 18768.0 + 10745 FYIENQKEY 9 158 617.2920891041608 1232.5696252751216 2 617.2927734255791 MULTI CID FTMS 0 0 0 9824 175104.90625 1.0 0 0.0 13 Unmodified _FYIENQKEY_ ENSG00000164902|ENST00000297540|PHAX 67.83816525789305 0.0219346420158844 4 {[QN]|[E{I|L}]|[KN]}KEE{I|L}Y{M(Oxidation (M))|F}Y 9 7 + 74.157 0.0 0.0 6.0165 6.0165 72.684 0.0 0.0 0.0 10.435701100294564 19.30154445766977 10.435701100294564 0.4453125937239832 0 0.0 1.0 1.7544321917401078 1.029169830404256 {[QN]|[E{I|L}]|[KN]}KEE{I|L}Y{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}KE[Y{M(Oxidation (M))|F}]{I|L}EY;{[QN]|[E{I|L}]|[KN]}EKE{I|L}Y{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}EK[Y{M(Oxidation (M))|F}]{I|L}EY;{[QN]|[E{I|L}]|[KN]}K[Y{M(Oxidation (M))|F}]E{I|L}EY;{[QN]|[E{I|L}]|[KN]}KE{I|L}EY{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}EK{I|L}EY{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}KEEY{I|L}{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}KE[Y{M(Oxidation (M))|F}]{I|L}YE;{[QN]|[E{I|L}]|[KN]}EKEY{I|L}{M(Oxidation (M))|F}Y 6.0165;5.9803;5.8581;5.822;5.5433;5.5172;5.3589;5.3205;5.3097;5.1621 -;-;-;-;-;-;-;-;-;- 4358 1 1.667 130535.2 0.959999978542328 5212 4623 9824 HBL1_DMSO_200M_050219_2,9837 HBL1_DMSO_200M_050219_2,9837,FYIENQKEY True True FYIENQKEY 53.493693 617.292773425579 1895405.625 9824.0 ENSG00000164902|ENST00000297540|PHAX 5.7056756019592285 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9838 53.497 108.0 1150500.0 25 0 184540.0 + 32404 RYVPRASYF 9 82 386.8734837197688 1157.5986217595064 3 386.8734924197197 MULTI CID FTMS 0 0 0 9824 166225.578125 0.113375937545746 -3 0.2528953552246094 14 Unmodified _RYVPRASYF_ ENSG00000112576|ENST00000372991|CCND3;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;nc|ENSG00000112576|P30281-3|CCND3 30.63653989081413 0.1413794767160703 4 YVQV[PS]Y{M(Oxidation (M))|F} 8 4 38.286 0.0 0.0 3.3074 0.0 0.0 156.1014118878922 0.0 156.1014118878922 0.0 23.06962701565345 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.2887254899964357 YVQV[PS]Y{M(Oxidation (M))|F} 3.3074 - 471 1 1.667 105618.1 1.0 5213 4623 9824 HBL1_DMSO_200M_050219_2,9838 HBL1_DMSO_200M_050219_2,9838,RYVPRASYF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9839 53.504 364.0 259990.0 25 0 24994.0 + 44488 YPAPPPLG 8 151 406.2212944505399 810.4280359678799 2 406.2212097048759 MULTI CID FTMS 0 0 0 9824 137165.1875 0.4952095630029338 9 -0.7398948669433594 15 Unmodified _YPAPPPLG_ REV__ENST00000510377.5_1_4:144106452-144106728:+|nuORF 32.45364647766026 0.3613649037604678 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KHP 5 -1 27.007 0.0 0.0 3.3324 0.0 0.0 0.0 185.09369836978752 185.09369836978752 13.027646714607355 0.0 0.0 0.0 0 1.0044321917401078 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KHP 3.3324 - 103 + 1 1.667 78283.4 1.0 5214 4623 9824 HBL1_DMSO_200M_050219_2,9839 HBL1_DMSO_200M_050219_2,9839,YPAPPPLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9841 53.508 3.3 17472000.0 25 0 3696300.0 + 14940 ILMEHIHKL 9 79 378.55491615673407 1132.6429190704025 3 378.5550414919853 MULTI CID FTMS 0 0 0 9840 15019837.0 1.0 0 0.0 1 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 42.312485326615175 0.0627620958981271 4 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 85.371 0.0 0.0 7.5373 7.5373 95.431 0.0 0.0 0.0 60.63412761482576 10.729949315425898 10.729949315425898 32.171779864987485 0 0.6421590589602533 2.0 0.9247425010840048 0.2134679910804404 + + {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQK{I|L};{I|L}{I|L}[YV]EQQK{I|L};{I|L}[YV]{I|L}EQQK{I|L} 7.5373;4.6969;4.5974;2.2258 +;-;-;- + 515 + 1 1.664 54584.0 1.0 5215 4624 9840 HBL1_DMSO_200M_050219_2,9841 HBL1_DMSO_200M_050219_2,9841,ILMEHIHKL True True ILMEHIHKL 53.508066 378.555041491985 408918588.0 9840.0 ENSG00000108298|ENST00000225430|RPL19;;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;;ENST00000432746.1_1_7:102781798-102782185:-|nuORF 7.021969318389893 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9842 53.509 6.4 8132300.0 25 0 2177800.0 + 9944 FPGKHFQEI 9 68 368.19447723393614 1101.5616023020084 3 368.1943542361259 MULTI CID FTMS 0 0 0 9840 7933265.0 0.8226151360898851 3 -0.2548065185546875 2 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 13.042465956692816 0.4836390050082244 4 QE{I|L}{M(Oxidation (M))|F} 4 7 30.918 0.0 0.0 2.8067 0.0 0.0 566.3012562482437 0.0 566.3012562482437 0.0 16.313506577119625 0.0 0.0 0 0.0 0.0 0.0 0.5 QE{I|L}{M(Oxidation (M))|F} 2.8067 - 95 1 1.664 47067.1 1.0 5216 4624 9840 HBL1_DMSO_200M_050219_2,9842 HBL1_DMSO_200M_050219_2,9842,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9843 53.51 6.7 9253700.0 25 0 1253100.0 + + 21638 LPPEVNRI 8 64 469.27679076482383 936.5390285964476 2 469.2772094607353 MULTI CID FTMS 0 0 0 9840 8918226.0 1.0 0 0.0 3 Unmodified _LPLDRLNP_ ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 15.847184025352805 0.6768015514314958 4 {I|L}PPE 4 -1 53.175 0.0 0.0 5.6779 0.0 0.0 0.0 497.2844121404901 497.2844121404901 46.18562527100117 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPE 5.6779 - 16 + 1 1.664 53316.0 1.0 5217 4624 9840 HBL1_DMSO_200M_050219_2,9843 HBL1_DMSO_200M_050219_2,9843,LPLDRLNP False False LPPEVNRI 53.510422 469.277209460735 128275736.0 9840.0 ENSG00000115128|ENST00000233468|SF3B6;;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 2.344052712122599 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9844 53.512 14.0 4260200.0 25 0 525230.0 + 4177 DAPIGPHL 8 62 410.2217440023912 818.4289350715824 2 410.2216674685478 MULTI CID FTMS 0 0 0 9840 4281456.0 1.0 0 0.0 4 Unmodified _DAPIGPHL_ ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A 36.46614268402704 0.2934124525509074 4 {[DA]|[EG]}P{I|L}GPH{I|L} 8 0 + 66.445 0.0 0.0 8.1186 8.1186 97.582 0.0 0.0 0.0 51.21645960868548 9.164317917986224 9.164317917986224 66.44524706148886 0 0.7059771852360797 2.0 0.0 0.0 + + {[DA]|[EG]}P{I|L}GPH{I|L} 8.1186 + + 57 + 1 1.664 51654.9 1.0 5218 4624 9840 HBL1_DMSO_200M_050219_2,9844 HBL1_DMSO_200M_050219_2,9844,DAPIGPHL False True DAPIGPHL 53.511601 410.221667468548 118864260.0 9840.0 ENSG00000107581|ENST00000369144|EIF3A;;nc|ENSG00000107581|Q14152-2|EIF3A 7.696271101633708 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9845 53.513 14.0 3324800.0 25 0 336760.0 + 9952 FPGKHFQEI 9 68 551.7875691100098 1101.5605852868196 2 551.7879516482353 MULTI CID FTMS 0 0 0 9840 3737705.25 0.7980971526097892 3 -0.2548065185546875 5 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 32.037481411007896 0.1235546156350648 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E 9 3 + 60.077 0.0 0.0 5.4538 5.4538 69.987 0.0 0.0 0.0 19.99037159853401 35.612971861862306 19.99037159853401 0.2287874528033739 0 0.9247425010840048 1.6989700043360187 1.305462187404089 0.3494850021680094 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQE{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]E{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[YK]PE;{[QN]|[E{I|L}]|[KN]}Q[VP]C(Carbamidomethyl (C))P{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[WP][KG]PE;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}Q[VP][CG]P{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[AG][VP]C(Carbamidomethyl (C))P{I|L}{M(Oxidation (M))|F} 5.4538;5.433;4.6179;4.5971;3.7344;3.2197;3.1885;2.8706;2.3838;2.3838 -;-;-;-;-;-;-;-;-;- 385 1 1.664 45045.9 1.0 5219 4624 9840 HBL1_DMSO_200M_050219_2,9845 HBL1_DMSO_200M_050219_2,9845,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9846 53.514 59.0 1211300.0 25 0 128390.0 + 38643 TTIKAFFPKK 10 107 394.2414100849522 1179.7024008550568 3 394.2412597537041 MULTI CID FTMS 0 0 0 9840 945185.5625 0.0503773864599378 4 -0.3521385192871094 6 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 32.78568957990786 0.2337485590374503 4 TT{I|L}KY{I|L}WKK 9 4 + 84.619 0.0 0.0 7.1729 7.1729 95.641 0.0 0.0 0.0 73.53025550412906 16.8348435778082 16.8348435778082 84.61934710801621 0 0.6549471895720984 1.3010299956639813 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK 7.1729 - 245 + 1 1.664 61957.1 1.0 5220 4624 9840 HBL1_DMSO_200M_050219_2,9846 HBL1_DMSO_200M_050219_2,9846,TTIKAFFPKK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9847 53.516 58.0 942970.0 25 0 88662.0 + 3793 DAIARLKEV 9 87 507.80064117852527 1013.5867294238506 2 507.8010436892509 MULTI CID FTMS 0 0 0 9840 873486.0 1.0 0 0.0 7 Unmodified _DAIARLKEV_ ENSG00000160752|ENST00000368356|FDPS;ENST00000461507.5_1_1:155279855-155288124:+|nuORF;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;ENST00000487002.1_1_1:155279855-155282231:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS 30.7034409873982 0.1405282614900322 4 {[DA]|[EG]}{I|L}AR{I|L}KEV 9 0 + 58.89 0.0 0.0 5.8101 5.8101 88.548 0.0 0.0 0.0 15.390011976480274 40.57582781025921 15.390011976480274 20.228787452803367 0 1.557902146726378 2.0 0.0 0.0 + + {[DA]|[EG]}{I|L}AR{I|L}KEV;{NN|[MP]|[D{I|L}]|[EV]}AAR{I|L}KEV;{[VA]|[{I|L}G]}EAR{I|L}KEV;{[VA]|[{I|L}G]}[KG]{I|L}{I|L}WEV;{[VA]|[{I|L}G]}[KG][NG]{I|L}KEV;{[VA]|[{I|L}G]}[KG]{I|L}[NG]KEV;{[VA]|[{I|L}G]}[KG]{I|L}E[W{I|L}]V 5.8101;3.8143;2.5758;2.5363;0.86009;0.86009;0.80962 +;-;-;-;-;-;- + 206 1 1.664 50234.2 1.0 5221 4624 9840 HBL1_DMSO_200M_050219_2,9847 HBL1_DMSO_200M_050219_2,9847,DAIARLKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9848 53.517 58.0 760900.0 25 0 46794.0 + 30652 RFPDGTNGL 9 89 488.7464410504657 975.4783291677312 2 488.7459594607353 MULTI CID FTMS 0 0 0 9840 769920.9375 0.5010762449525215 -13 1.0462150573730469 8 Unmodified _RFPDGTNGL_ ENSG00000164442|ENST00000367651|CITED2;nc|ENSG00000164442|Q99967-2|CITED2 38.17557092003332 0.0854718145212029 4 [R{M(Oxidation (M))|F}][DP]GTNG{I|L} 9 0 + 51.661 0.0 0.0 5.2959 5.2959 82.733 0.0 0.0 0.0 0.915149811213496 40.40148706960647 0.915149811213496 9.208187539523747 0 0.805462187404089 0.0 0.7742275032520141 0.0 + + [R{M(Oxidation (M))|F}][DP]GTNG{I|L};[R{M(Oxidation (M))|F}][DP]GTGGG{I|L};[R{M(Oxidation (M))|F}][PS]{[DA]|[EG]}NG{I|L};{[RE]|[WV]}{[DS]|[MA]|[CV]|TT}[RN]S{I|L} 5.2959;4.352;3.0651;0.57938 +;-;-;- + 67 1 1.664 38871.9 1.0 5222 4624 9840 HBL1_DMSO_200M_050219_2,9848 HBL1_DMSO_200M_050219_2,9848,RFPDGTNGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9849 53.518 48.0 795670.0 25 0 76321.0 + 25021 MPQNRTIYV 9 65 561.2920781089607 1120.569603284721 2 561.2927123904228 MULTI CID FTMS 0 0 0 9840 661329.375 0.1295781520131285 3 -0.2548065185546875 9 Unmodified _MPQNRTIYV_ ENSG00000166801|ENST00000675163|FAM111A 20.41453444215458 0.284085796332423 4 MPQ 3 6 35.947 0.0 0.0 3.2079 0.0 0.0 0.0 761.3928927057249 761.3928927057249 15.501896823007826 0.0 0.0 0.0 0 0.3807196863200844 1.2218487496163564 0.0 0.0 + MPQ 3.2079 + + 36 + 1 1.664 36585.5 1.0 5223 4624 9840 HBL1_DMSO_200M_050219_2,9849 HBL1_DMSO_200M_050219_2,9849,MPQNRTIYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9850 53.52 63.0 1438400.0 25 0 117020.0 + 4160 DAPHPPLKI 9 116 329.85914441787924 986.5556038538376 3 329.8588439822197 MULTI CID FTMS 0 0 0 9840 710692.0 0.0185728742770296 -18 1.3334579467773438 10 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 18.1463463914782 0.3454829746528889 4 {[DA]|[EG]}PHPP{I|L}K{I|L} 9 0 + 52.328 0.0 0.0 5.3041 5.3041 86.597 0.0 0.0 0.0 40.73374456014277 8.559578981380284 8.559578981380284 21.976763868100853 0 0.3054621874040891 2.0 0.0 0.2396518287104437 + + {[DA]|[EG]}PHPP{I|L}K{I|L};{[DA]|[EG]}[KQ]{[RE]|[WV]}K{I|L};W[KQ][DG]{I|L}K{I|L} 5.3041;3.0764;1.5891 +;-;- + 184 + 1 1.664 77140.5 1.0 5224 4624 9840 HBL1_DMSO_200M_050219_2,9850 HBL1_DMSO_200M_050219_2,9850,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9851 53.522 89.0 553140.0 25 0 27748.0 + 38053 TPESKIRFV 9 77 359.54216894291795 1075.604677428954 3 359.5415832400322 MULTI CID FTMS 0 0 0 9840 651407.1875 0.2719445995180906 2 -0.1649932861328125 11 Unmodified _TPESKIRFV_ ENSG00000093144|ENST00000454859|ECHDC1;ENST00000475319.1_1_6:127611016-127636085:-|nuORF;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1 19.62595529434964 0.305431704817896 4 TPESK{I|L} 6 3 60.851 0.0 0.0 5.6574 0.0 0.0 0.0 417.22556482486567 417.22556482486567 50.01393227966285 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.4247425010840047 0.0 + TPESK{I|L} 5.6574 + + 61 + 1 1.664 50880.8 1.0 5225 4624 9840 HBL1_DMSO_200M_050219_2,9851 HBL1_DMSO_200M_050219_2,9851,TPESKIRFV False True TPESKIRFV 53.521912 359.541583240032 33679856.0 9840.0 nc|ENSG00000093144|Q9NTX5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;;ENST00000475319.1_1_6:127611016-127636085:-|nuORF;;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;;ENSG00000093144|ENST00000454859|ECHDC1 6.262648264567058 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9852 53.525 181.0 301530.0 25 0 25162.0 -1 0 65 918.419584038686 1834.824615144172 2 918.4213134646416 MULTI CID FTMS 0 0 0 9840 396489.46875 0.4443205168486977 3 -0.2548065185546875 12 4 {I|L}NA[TP]NQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 72.568 0.0 0.0 3.955 0.0 0.0 211.09613234687657 0.0 211.09613234687657 0.0 50.349534990543845 0.0 0.0 0 1.0 0.0 0.0 0.7742275032520141 {I|L}NA[TP]NQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.955 - 1305 1 1.664 43709.6 1.0 5226 4624 9840 HBL1_DMSO_200M_050219_2,9852 HBL1_DMSO_200M_050219_2,9852, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9853 53.528 143.0 724770.0 25 0 90292.0 + 36170 SVVGNLHRL 9 108 332.19804610910097 993.572308927503 3 332.1973449587822 MULTI CID FTMS 0 0 0 9840 368464.625 0.7798651653526454 -1 0.1247482299804687 13 Unmodified _SVVGNLHRL_ ENSG00000111641|ENST00000322166|NOP2;ENST00000536506.5_1_12:6669839-6672276:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 30.63653989081413 0.1413794767160703 4 [VS]VGN{I|L}HR{I|L} 9 0 + 64.905 0.0 0.0 6.5325 6.5325 87.131 0.0 0.0 0.0 54.359404641421634 4.939324111198502 4.939324111198502 9.208187539523742 0 0.3807196863200844 2.0 0.0 0.3807196863200844 + + [VS]VGN{I|L}HR{I|L};[VS]VGGG{I|L}HR{I|L};[VS]V{I|L}[NG]HR{I|L};[VS]V{I|L}[YT]{I|L}TV;[VS]V{I|L}[YT]{I|L}S{I|L};[VS]{I|L}V[YT]{I|L}TV;[VS]{I|L}V[YT]{I|L}S{I|L};[VS]{I|L}V[NG]HR{I|L};[VS]{I|L}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R{I|L};[VG][PA]A[KQ]R[PA] 6.5325;5.6057;4.468;4.158;4.158;3.5521;3.5521;3.4789;3.0041;0.77478 +;-;-;-;-;-;-;-;-;- + 180 + 1 1.664 86111.8 1.0 5227 4624 9840 HBL1_DMSO_200M_050219_2,9853 HBL1_DMSO_200M_050219_2,9853,SVVGNLHRL False True SVVGNLHRL 53.528307 332.197344958782 5800593.5 9840.0 ENSG00000111641|ENST00000322166|NOP2;;nc|ENSG00000111641|P46087-2|NOP2;;ENST00000536506.5_1_12:6669839-6672276:-|nuORF;;nc|ENSG00000111641|P46087-4|NOP2;;nc|ENSG00000111641|P46087-3|NOP2 5.624116579691569 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9854 53.531 120.0 439290.0 25 0 25325.0 -1 FKICMKMCLLQ 11 76 744.3666559237727 0 744.3661987185478 PEAK CID FTMS 0 0 0 9840 337072.8125 1.0 0 0.0 14 2 Carbamidomethyl (C),Oxidation (M) _FKIC(Carbamidomethyl (C))M(Oxidation (M))KMC(Carbamidomethyl (C))LLQ_ ENSG00000179387|ENST00000323570|ELMOD2 12.240655878213236 0.4295705806160874 4 N{I|L}NA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEEE{I|L} 11 -1 33.964 0.0 0.0 2.2845 0.0 0.0 97.05895852582267 143.04648767642814 240.10544620225085 0.0 0.0 0.0 0.0 0 1.774227503252014 0.0 0.0 0.3807196863200844 N{I|L}NA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AEEE{I|L} 2.2845 - 838 + 1 1.664 43860.8 1.0 5228 4624 9840 HBL1_DMSO_200M_050219_2,9854 HBL1_DMSO_200M_050219_2,9854,FKICMKMCLLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9855 53.535 225.0 474510.0 25 0 52210.0 + + 40437 VVIKKLNEI 9 146 352.56560889899134 1054.674997297174 3 352.5651122927666 MULTI CID FTMS 0 0 0 9840 363886.875 0.4011020784566437 -2 0.1792411804199218 15 Unmodified _VIKGQSIVVL_ ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENSG00000184110|ENST00000331666|EIF3C 34.221707139014875 0.2185845369562963 4 VV{I|L}K 4 -1 55.988 0.0 0.0 5.3085 0.0 0.0 0.0 612.3372370062881 612.3372370062881 31.505149978319903 0.0 0.0 0.0 0 0.555462187404089 2.0 0.0 0.0 VV{I|L}K 5.3085 - 302 + 1 1.664 98633.3 1.0 5229 4624 9840 HBL1_DMSO_200M_050219_2,9855 HBL1_DMSO_200M_050219_2,9855,VIKGQSIVVL False False VVIKKLNEI 53.535057 352.565112292767 7034932.5 9840.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 1.665172686179479 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9856 53.541 319.0 257830.0 25 0 34946.0 + 5090 DGYVVKETI 9 113 512.2705710040321 1022.5265890748644 2 512.2717773318291 MULTI CID FTMS 0 0 0 9840 250216.9375 0.0514255732011567 4 -0.3521385192871094 16 Unmodified _DGYVVKETI_ ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1;nc|ENSG00000117676|Q15418-3|RPS6KA1;nc|ENSG00000117676|Q15418-4|RPS6KA1 36.506200033944 0.094635877243972 4 [YV]{[QV]|[N{I|L}]|[RA]|[KV]}VV 6 5 25.111 0.0 0.0 2.4558 0.0 0.0 0.0 332.0883062419459 332.0883062419459 0.4180451402286564 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 [YV]{[QV]|[N{I|L}]|[RA]|[KV]}VV 2.4558 - 495 1 1.664 65972.3 1.0 5230 4624 9840 HBL1_DMSO_200M_050219_2,9856 HBL1_DMSO_200M_050219_2,9856,DGYVVKETI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9857 53.543 118.0 476170.0 25 0 34731.0 + 14173 IDFNKGLV 8 103 453.2597845675383 904.5050162018764 2 453.2609741091728 MULTI CID FTMS 0 0 0 9840 161266.4375 1.0 0 0.0 17 Unmodified _IDFNKGLV_ REV__ENST00000522036.1_1_8:62596574-62602247:-|nuORF 10.183394434864962 0.7604730176254005 4 {NN|[MP]|[D{I|L}]|[EV]}[RK]S{[WT]|[RM]} 7 -1 + 15.852 0.0 0.0 1.7526 1.7526 63.75 0.0 0.0 0.0 2.1387981994508074 3.6338674804411752 2.1387981994508074 2.1387981994508074 0 0.0 1.3010299956639813 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[RK]S{[WT]|[RM]};{[TV]|[{I|L}S]}RRS{[WT]|[RM]} 1.7526;1.5161 -;- 115 1 1.664 46865.9 1.0 5231 4624 9840 HBL1_DMSO_200M_050219_2,9857 HBL1_DMSO_200M_050219_2,9857,IDFNKGLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9858 53.557 800.0 237240.0 25 0 22602.0 + 42005 VQQFRIDLDF 10 130 640.8327488146484 1279.6509446960968 2 640.8321411013603 MULTI CID FTMS 0 0 0 9840 154079.765625 0.4199406084845241 -2 0.1792411804199218 18 Unmodified _VQQFRIDLDF_ REV__ENSG00000150893|ENST00000280481|FREM2 13.90604991867851 0.6142120002215601 4 {[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}[EP]HQV 9 -1 46.678 0.0 0.0 3.6477 0.0 0.0 0.0 218.07511396783423 218.07511396783423 9.104830857170825 0.0 0.0 0.0 0 0.0 1.0 1.6237125054200234 0.6505149978319906 {[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}[EP]HQV 3.6477 - 10841 1 1.664 141842.0 0.8600000143051147 5232 4624 9840 HBL1_DMSO_200M_050219_2,9858 HBL1_DMSO_200M_050219_2,9858,VQQFRIDLDF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9859 53.571 800.0 277490.0 25 0 29675.0 + 21154 LPASLRSV 8 176 421.7581276767224 841.5017024202449 2 421.7583495974541 MULTI CID FTMS 0 0 0 9840 143974.609375 0.610939279920601 -1 0.1247482299804687 19 Unmodified _LPASLRSV_ ENSG00000127980|ENST00000248633|PEX1;ENST00000484913.5_1_7:92116773-92148321:-|nuORF;ENST00000496420.5_1_7:92123531-92130970:-|nuORF;nc|ENSG00000127980|O43933-2|PEX1 41.8396318013385 0.2035142800366642 4 {I|L}PAS{I|L}RSV 8 0 + 69.022 0.0 0.0 8.2022 8.2022 89.545 0.0 0.0 0.0 54.17847141047781 6.419865691427162 6.419865691427162 7.132631309263324 0 0.6354917018758734 1.6989700043360187 0.6694451763165201 0.3494850021680094 + + {I|L}PAS{I|L}RSV;{I|L}PAS{I|L}RVS;{I|L}PV[TA]RSV;{I|L}PARRMV;{I|L}PA{[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}{I|L};{I|L}PV[TA]RVS;{I|L}P[KT][RD]{I|L};{I|L}P[KT]{[RE]|[WV]}V;{I|L}PA[{I|L}P][KG]{M(Oxidation (M))|F};{I|L}PVE[KA]SV 8.2022;7.3546;5.6892;5.4399;5.4276;4.8416;4.7388;4.6176;4.5798;4.5584 +;-;-;-;-;-;-;-;-;- + 283 + 1 1.664 174188.2 0.6800000071525574 5233 4624 9840 HBL1_DMSO_200M_050219_2,9859 HBL1_DMSO_200M_050219_2,9859,LPASLRSV False True LPASLRSV 53.570968 421.758349597454 2044586.625 9840.0 nc|ENSG00000127980|O43933-2|PEX1;;ENST00000496420.5_1_7:92123531-92130970:-|nuORF;;ENSG00000127980|ENST00000248633|PEX1;;ENST00000484913.5_1_7:92116773-92148321:-|nuORF 4.361628373463948 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9860 53.585 800.0 117780.0 25 0 9100.4 + 38647 TTIKAFFPKK 10 114 590.8583818750385 1179.702210816877 2 590.8583251833916 MULTI CID FTMS 0 0 0 9840 132150.484375 0.052051449557643 4 -0.3521385192871094 20 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 36.506200033944 0.1944608063770638 4 {[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK 9 4 + 61.621 0.0 0.0 5.2235 5.2235 86.938 0.0 0.0 0.0 42.15735931149851 17.587418566968154 17.587418566968154 30.874628727857065 0 2.004432191740108 0.0 0.0 0.3494850021680094 {[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK;{[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}[VS]KK;{[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}{[SA]|[TG]}KR;{[SA]|[TG]}{I|L}V[HV]{I|L}{[DA]|[EG]}KK;[K{I|L}]E[HV]{I|L}{[DA]|[EG]}KK;{[DS]|[MA]|[CV]|TT}[K{I|L}][RH]K{I|L}[PS];{[SA]|[TG]}{I|L}V[HV]{I|L}{[SA]|[TG]}KR;[K{I|L}]E[HV]{I|L}{[SA]|[TG]}KR;{[SA]|[TG]}{I|L}V[HV]P{[DS]|[MA]|[CV]|TT}KK;[K{I|L}]E[HV]P{[DS]|[MA]|[CV]|TT}KK 5.2235;2.6063;2.0284;1.5646;1.5104;1.2685;0.98669;0.93254;0.88557;0.83143 -;-;-;-;-;-;-;-;-;- 341 + 1 1.664 75474.6 0.8299999833106995 5234 4624 9840 HBL1_DMSO_200M_050219_2,9860 HBL1_DMSO_200M_050219_2,9860,TTIKAFFPKK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9862 53.59 147.0 378590.0 25 0 38001.0 + 12219 GQTQVEIKV 9 94 501.28544038487314 1000.5563278365464 2 501.2853271365166 MULTI CID FTMS 0 0 0 9861 353143.3125 0.3831847060671337 2 -0.1736679077148437 1 Unmodified _GQTQVEIKV_ ENSG00000113013|ENST00000297185|HSPA9;ENST00000432228.1_1_2:222827655-222828180:+|nuORF;ENST00000507097.5_1_5:137893182-137909502:-|nuORF 57.72198328787511 0.0273433238377839 4 {[QG]|[NA]}TQVE{I|L}KV 9 0 + 66.749 0.0 0.0 6.6712 6.6712 88.198 0.0 0.0 0.0 45.145228064086 11.478174818886371 11.478174818886371 9.208187539523747 0 0.7302046884880937 0.6989700043360187 0.3494850021680094 0.6109243748081782 + + {[QG]|[NA]}TQVE{I|L}KV;{[QG]|[NA]}T[AG]VE{I|L}KV;[K{I|L}][{M(Oxidation (M))|F}V]VQ[HM];[K{I|L}][{M(Oxidation (M))|F}V]V[AG][HM] 6.6712;5.7509;1.8736;0.94787 +;-;-;- + 230 + 1 1.664 46007.3 1.0 5235 4625 9861 HBL1_DMSO_200M_050219_2,9862 HBL1_DMSO_200M_050219_2,9862,GQTQVEIKV True True GQTQVEIKV 53.589884 501.285327136517 13798050.0 9861.0 ENST00000507097.5_1_5:137893182-137909502:-|nuORF;;ENSG00000113013|ENST00000297185|HSPA9;;ENST00000432228.1_1_2:222827655-222828180:+|nuORF 7.336803595225017 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9863 53.604 800.0 142560.0 25 0 7614.8 -1 SQIMCLLWS 9 173 577.2703474646505 1152.526141996101 2 577.2713500857353 MULTI CID FTMS 0 0 0 9861 31308.41015625 0.0601601251998468 3 -0.2709999084472656 2 Carbamidomethyl (C),Oxidation (M) _SQIM(Oxidation (M))C(Carbamidomethyl (C))LLWS_ ENST00000495415.5_1_10:99219495-99219895:-|nuORF 17.11289562659939 0.3734572693229295 4 {[QS]|[NT]}MVM 5 -1 28.907 0.0 0.0 2.5081 0.0 0.0 0.0 573.2513366584634 573.2513366584634 16.695895377007098 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.2396518287104437 {[QS]|[NT]}MVM 2.5081 - 535 1 1.664 89346.3 0.8899999856948853 5236 4625 9861 HBL1_DMSO_200M_050219_2,9863 HBL1_DMSO_200M_050219_2,9863,SQIMCLLWS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9864 53.605 24.0 2589000.0 25 0 384390.0 + 6468 EAFSDHPAI 9 97 493.73287918731 985.45120544142 2 493.7330505251884 MULTI CID FTMS 0 0 0 9861 1655363.875 0.6698937419879553 -1 0.0811386108398437 3 Unmodified _EAFSDHPAI_ ENSG00000198894|ENST00000361786|CIPC 44.40701690623563 0.0526327925666318 4 {[TV]|[{I|L}S]}VHDS{M(Oxidation (M))|F} 7 7 33.354 0.0 0.0 3.3847 0.0 0.0 0.0 197.05399892430583 197.05399892430583 14.21211919723964 0.0 0.0 0.0 0 0.2887254899964357 1.2218487496163564 0.8494850021680094 0.0 {[TV]|[{I|L}S]}VHDS{M(Oxidation (M))|F} 3.3847 - 350 1 1.664 52940.4 1.0 5237 4625 9861 HBL1_DMSO_200M_050219_2,9864 HBL1_DMSO_200M_050219_2,9864,EAFSDHPAI True True EAFSDHPAI 53.604895 493.733050525188 19860336.0 9861.0 ENSG00000198894|ENST00000361786|CIPC 7.1183217366536455 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9865 53.607 73.0 906540.0 25 0 211510.0 + 19778 LGRTPGLL 8 60 413.7607116462842 825.5068703593685 2 413.7608520388603 MULTI CID FTMS 0 0 0 9861 554130.625 0.8475433537062869 1 -0.0838546752929687 4 Unmodified _LGRTPGLL_ REV__ENSG00000170266|ENST00000307363|GLB1;REV__ENST00000440656.1_1_3:33110441-33138613:-|nuORF;REV__ENST00000485698.5_1_3:33095017-33138613:-|nuORF;REV__nc|ENSG00000170266|P16278-2|GLB1;REV__nc|ENSG00000170266|P16278|GLB1 15.847184025352805 0.6768015514314958 4 YY{I|L}G{I|L}{I|L} 6 -1 22.44 0.0 0.0 2.7183 0.0 0.0 85.08990676093906 0.0 85.08990676093906 0.0 7.836003313407076 0.0 0.0 0 0.242992819099939 0.0 0.0 0.0 YY{I|L}G{I|L}{I|L} 2.7183 - 24 1 1.664 59012.3 1.0 5238 4625 9861 HBL1_DMSO_200M_050219_2,9865 HBL1_DMSO_200M_050219_2,9865,LGRTPGLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9866 53.609 98.0 471110.0 25 0 54949.0 + 10726 FYDNKGITY 9 72 560.7682960205485 1119.522039107897 2 560.7689086794853 MULTI CID FTMS 0 0 0 9861 443389.28125 0.7987436349703785 1 -0.0838546752929687 5 Unmodified _FYDNKGITY_ ENSG00000152455|ENST00000354919|SUV39H2;nc|ENSG00000152455|Q9H5I1-2|SUV39H2;nc|ENSG00000152455|Q9H5I1-3|SUV39H2 18.1463463914782 0.3454829746528889 4 {M(Oxidation (M))|F}Y 2 7 36.242 0.0 0.0 3.2373 0.0 0.0 0.0 806.3691937799581 806.3691937799581 19.78855930516417 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 + {M(Oxidation (M))|F}Y 3.2373 + + 52 + 1 1.664 41837.2 1.0 5239 4625 9861 HBL1_DMSO_200M_050219_2,9866 HBL1_DMSO_200M_050219_2,9866,FYDNKGITY False True FYDNKGITY 53.608717 560.768908679485 4757020.0 9861.0 ENSG00000152455|ENST00000354919|SUV39H2;;nc|ENSG00000152455|Q9H5I1-2|SUV39H2;;nc|ENSG00000152455|Q9H5I1-3|SUV39H2 3.3611080646514893 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9867 53.612 153.0 611830.0 25 0 39369.0 42242 VSLTRYRV 8 123 497.29466561814087 992.5747783030818 2 497.7945129275322 MULTI CID FTMS 0 0 0 9861 265503.875 1.0 0 0.0 6 Unmodified _VSLTRYRV_ ENSG00000196141|ENST00000409140|SPATS2L;nc|ENSG00000196141|Q9NUQ6-2|SPATS2L;nc|ENSG00000196141|Q9NUQ6-3|SPATS2L;nc|ENSG00000196141|Q9NUQ6-4|SPATS2L 9.347437153973935 0.7675937258251505 4 [VS]{I|L} 3 5 23.301 0.0 0.0 2.3475 0.0 0.0 0.0 690.3676609537255 690.3676609537255 -0.9792690222501256 0.0 -0.9792690222501256 0.0 0 0.0 2.0 0.0 0.0 + [VS]{I|L} 2.3475 + + 456 1 1.664 72707.1 1.0 5240 4625 9861 HBL1_DMSO_200M_050219_2,9867 HBL1_DMSO_200M_050219_2,9867,VSLTRYRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9868 53.618 324.0 223010.0 25 0 14648.0 + 14927 ILMEHIHKL 9 127 575.3262969828055 1148.638041032411 2 575.3262817263603 MULTI CID FTMS 0 0 0 9861 172417.140625 1.0 0 0.0 7 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 55.50274090549119 0.0285720310785888 4 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L} 9 0 + 84.359 0.0 0.0 7.3443 7.3443 79.406 0.0 0.0 0.0 36.478174818886366 1.505846518203242 1.505846518203242 1.505846518203242 0 1.6549471895720984 2.0 0.7302046884880937 0.2614393726401688 + + {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}H{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}EH[{I|L}P]{I|L}[PA];{I|L}{I|L}{M(Oxidation (M))|F}EH[{I|L}P][PA]{I|L};{I|L}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}[R{M(Oxidation (M))|F}]V;{I|L}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}HHK;{[TV]|[{I|L}S]}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WE]K{I|L};{[TV]|[{I|L}S]}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))G]|[NC]}{I|L}{I|L}{I|L};[HK]{I|L}{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}{I|L}{I|L};[{M(Oxidation (M))|F}E][H{I|L}]{I|L}{I|L}HK{I|L} 7.3443;7.2132;4.0423;3.7426;3.5441;3.4781;1.5451;1.4164;1.27;1.2596 +;-;-;-;-;-;-;-;-;- + 442 + 1 1.664 58449.3 1.0 5241 4625 9861 HBL1_DMSO_200M_050219_2,9868 HBL1_DMSO_200M_050219_2,9868,ILMEHIHKL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9869 53.631 800.0 147220.0 25 0 10972.0 + -1 NRCHKENRFLQ 11 122 751.3730879336148 1500.7316229340297 2 751.3716918826103 MULTI CID FTMS 0 0 0 9861 135819.546875 0.6189109199713231 -1 0.0811386108398437 8 Carbamidomethyl (C) _NRC(Carbamidomethyl (C))HKENRFLQ_ REV__ENSG00000130943|ENST00000253255|PKDREJ 18.373094154950223 0.6529654022026722 4 [NP]{I|L}NEA{[MG]|[TS]}[NP]G{M(Oxidation (M))|F}{I|L}Q 14 -1 + 103.0 0.0 0.0 6.8636 6.8636 86.046 0.0 0.0 0.0 4.639764356889188 45.571848844639376 4.639764356889188 6.77440017027358 0 3.3494850021680094 1.3010299956639813 0.0 1.2376954943324543 [NP]{I|L}NEA{[MG]|[TS]}[NP]G{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NEA{[MG]|[TS]}{[CT]|[{M(Oxidation (M))|F}G]}NP{I|L}Q;[NP]{I|L}NE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[NP]G{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HM]{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}N[KC]PRDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNEA{[MG]|[TS]}[NP]G{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[CT]|[{M(Oxidation (M))|F}G]}NP{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNEA{[MG]|[TS]}[HM]{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNEA{[MG]|[TS]}{[CT]|[{M(Oxidation (M))|F}G]}NP{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[NP]G{M(Oxidation (M))|F}{I|L}Q 6.8636;6.4122;6.2867;6.0447;6.0152;5.8366;5.8353;5.5928;5.3852;5.2597 -;-;-;-;-;-;-;-;-;- 5214 1 1.664 86914.2 0.7699999809265137 5242 4625 9861 HBL1_DMSO_200M_050219_2,9869 HBL1_DMSO_200M_050219_2,9869,NRCHKENRFLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9870 53.645 800.0 125710.0 25 0 13728.0 + -1 CPFCVDPSCP 10 143 619.7359458628117 1237.4573387924231 2 619.7350952029228 MULTI CID FTMS 0 0 0 9861 128094.6484375 1.0 0 0.0 9 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))PFC(Carbamidomethyl (C))VDPSC(Carbamidomethyl (C))P_ REV__ENST00000540458.5_1_12:6950693-6952146:+|nuORF 6.723162845929126 0.6955379296933136 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G 3 -1 23.301 0.0 0.0 1.883 0.0 0.0 0.0 943.311958503614 943.311958503614 5.500131064470249 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G 1.883 - 484 1 1.664 77275.3 0.8100000023841858 5243 4625 9861 HBL1_DMSO_200M_050219_2,9870 HBL1_DMSO_200M_050219_2,9870,CPFCVDPSCP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9871 53.655 541.0 224540.0 25 0 11490.0 11426 GGSVDLFH 8 180 416.2045169094032 830.3944808856064 2 416.2030517458916 MULTI CID FTMS 0 0 0 9861 129915.515625 1.0 0 0.0 10 Unmodified _GGSVDLFH_ ENSG00000222028|ENST00000408907|PSMB11 10.183394434864962 0.7604730176254005 4 [DN]T{M(Oxidation (M))|F}VHV 7 7 + 48.166 0.0 0.0 5.8004 5.8004 79.059 0.0 0.0 0.0 20.501444527144272 4.29348472923661 4.29348472923661 4.29348472923661 0 0.3252574989159953 1.5228787452803376 0.0 0.0 [DN]T{M(Oxidation (M))|F}VHV;[DN]T{M(Oxidation (M))|F}VVH;[DN][RV]D{[NV]|[RG]};[DN][WQ]R{I|L};[DN][KG][PA]MV;[DN][KG]{[DS]|[MA]|[CV]|TT}PV;[DN][KG]{[HG]|PP}{[CT]|[{M(Oxidation (M))|F}G]};[HV]{M(Oxidation (M))|F}TD{[NV]|[RG]};[DN][KG]{[DS]|[MA]|[CV]|TT}VP;[HV]{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}[NS] 5.8004;5.2834;2.0982;2.09;1.577;1.3312;1.3181;1.2913;0.83909;0.81205 -;-;-;-;-;-;-;-;-;- 223 + 1 1.664 95476.0 1.0 5244 4625 9861 HBL1_DMSO_200M_050219_2,9871 HBL1_DMSO_200M_050219_2,9871,GGSVDLFH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9872 53.669 800.0 256910.0 25 0 18095.0 -1 PLPQDLVM 8 189 464.74269551758135 927.4708381019628 2 466.7498962283134 MULTI CID FTMS 0 0 0 9861 111603.0390625 0.2894578866940047 -10 0.750335693359375 11 Oxidation (M) _PLPQDLVM(Oxidation (M))_ ENSG00000166133|ENST00000315616|RPUSD2;nc|ENSG00000166133|Q8IZ73-2|RPUSD2 17.086550045450526 0.6584923310065985 4 PPPPPA{M(Oxidation (M))|F} 7 -1 25.17 0.0 0.0 2.7138 0.0 0.0 206.123439275594 0.0 206.123439275594 0.0 -0.8163370842417805 -0.8163370842417805 0.0 0 0.0 0.0 0.0 0.0 PPPPPA{M(Oxidation (M))|F} 2.7138 - 1363 + 1 1.664 156914.6 0.6700000166893005 5245 4625 9861 HBL1_DMSO_200M_050219_2,9872 HBL1_DMSO_200M_050219_2,9872,PLPQDLVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9874 53.673 5.4 11224000.0 25 0 1613100.0 + 36178 SVVPDVRSV 9 57 479.271890235565 956.52922753793 2 479.2720825076103 MULTI CID FTMS 0 0 0 9873 10991381.0 1.0 0 0.0 1 Unmodified _SVVPDVRSV_ chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1;ENSG00000073584|ENST00000348513|SMARCE1;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;nc|ENSG00000073584|Q969G3-2|SMARCE1;nc|ENSG00000073584|Q969G3-3|SMARCE1;nc|ENSG00000073584|Q969G3-4|SMARCE1;nc|ENSG00000073584|Q969G3-5|SMARCE1;nc|ENSG00000073584|Q969G3-6|SMARCE1 18.373094154950223 0.3393451798331396 4 [VS]VPDV 6 3 55.406 0.0 0.0 5.7924 0.0 0.0 0.0 357.1898592584594 357.1898592584594 48.4163750790475 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + [VS]VPDV 5.7924 + + 21 + 1 1.664 51187.3 1.0 5246 4626 9873 HBL1_DMSO_200M_050219_2,9874 HBL1_DMSO_200M_050219_2,9874,SVVPDVRSV False True SVVPDVRSV 53.673059 479.27208250761 328813080.0 9873.0 nc|ENSG00000073584|Q969G3-6|SMARCE1;;nc|ENSG00000073584|Q969G3-2|SMARCE1;;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;;nc|ENSG00000073584|Q969G3-3|SMARCE1;;nc|ENSG00000073584|Q969G3-4|SMARCE1;;ENSG00000073584|ENST00000348513|SMARCE1;;nc|ENSG00000073584|Q969G3-5|SMARCE1;;chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1 5.962029774983724 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9875 53.674 17.0 3176400.0 25 0 489440.0 + 44910 YPPPEVRNI 9 48 542.7934218667502 1083.5722908003004 2 542.7932617068291 MULTI CID FTMS 0 0 0 9873 2865281.25 0.154683076579232 14 -1.1333999633789062 2 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 20.580933911654288 0.2795815587326093 4 YPPPE 5 4 66.454 0.0 0.0 6.1328 0.0 0.0 0.0 497.2848299615844 497.2848299615844 59.463950151760656 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + YPPPE 6.1328 + + 87 + 1 1.664 50237.2 1.0 5247 4626 9873 HBL1_DMSO_200M_050219_2,9875 HBL1_DMSO_200M_050219_2,9875,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9876 53.675 28.0 2141100.0 25 0 476270.0 15410 IPPDQQRLI 9 56 540.3146414642733 1078.6147299953466 2 540.3145019412041 MULTI CID FTMS 0 0 0 9873 1988390.25 0.080401937662233 17 -1.4660415649414062 3 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 13.042465956692816 0.4836390050082244 4 {I|L}PPD 4 5 56.186 0.0 0.0 5.2091 0.0 0.0 0.0 653.3766573541624 653.3766573541624 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPD 5.2091 + + 13 + 1 1.664 55428.0 1.0 5248 4626 9873 HBL1_DMSO_200M_050219_2,9876 HBL1_DMSO_200M_050219_2,9876,IPPDQQRLI False True LPPDLVNVRG 53.675415 540.314501941204 259887056.0 9873.0 ENSG00000087448|ENST00000381271|KLHL42 1.7415726880232494 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9877 53.677 28.0 2288500.0 25 0 641870.0 + 32403 RYVPRASYF 9 54 579.8065138407006 1157.5984747482012 2 579.8068115115166 MULTI CID FTMS 0 0 0 9873 1914916.75 1.0 0 0.0 4 Unmodified _RYVPRASYF_ ENSG00000112576|ENST00000372991|CCND3;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;nc|ENSG00000112576|P30281-3|CCND3 13.042465956692816 0.4836390050082244 4 RYV 3 6 27.677 0.0 0.0 2.3909 0.0 0.0 0.0 736.3452242486936 736.3452242486936 11.479400086720377 0.0 0.0 0.0 0 0.75 0.0 0.0 0.0 + RYV 2.3909 + + 17 + 1 1.664 53862.9 1.0 5249 4626 9873 HBL1_DMSO_200M_050219_2,9877 HBL1_DMSO_200M_050219_2,9877,RYVPRASYF False True RYVPRASYF 53.676594 579.806811511517 108538401.0 9873.0 ENST00000510058.1_1_6:41904922-41909441:-|nuORF;;nc|ENSG00000112576|P30281-3|CCND3;;ENSG00000112576|ENST00000372991|CCND3 7.70420773824056 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9878 53.678 35.0 1546500.0 25 0 329870.0 + 14929 ILMEHIHKL 9 83 383.8863597403589 0 383.8864013552666 PEAK CID FTMS 0 0 0 9873 1465786.875 1.0 0 0.0 5 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 40.72490554402381 0.0581536288891289 4 {I|L}HK 3 6 9.4112 0.0 0.0 1.229 0.0 0.0 256.4231578578677 128.07222925357658 384.4953871114443 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.25 + {I|L}HK 1.229 + + 37 + 1 1.664 49360.1 1.0 5250 4626 9873 HBL1_DMSO_200M_050219_2,9878 HBL1_DMSO_200M_050219_2,9878,ILMEHIHKL True False ILMEHIHKL 53.677773 383.886401355267 33565257.125 9873.0 ENSG00000108298|ENST00000225430|RPL19;;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;;ENST00000432746.1_1_7:102781798-102782185:-|nuORF 8.286311944325766 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9879 53.679 48.0 1238300.0 25 0 173350.0 -1 0 102 316.18118241494136 630.3478118966827 2 316.1807433962822 MULTI CID FTMS 0 0 0 9873 1264293.5 0.6342457068862266 -2 0.1649932861328125 6 4 V 1 -1 5.4846 0.0 0.0 0.87008 0.0 0.0 111.03123582422025 417.2271212213501 528.2583570455703 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.87008 - 7 + 1 1.664 53749.7 1.0 5251 4626 9873 HBL1_DMSO_200M_050219_2,9879 HBL1_DMSO_200M_050219_2,9879, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9880 53.68 51.0 955490.0 25 0 101990.0 + 22084 LPPPTPSQI 9 86 475.27156135390464 948.5285697746092 2 475.2716552615166 MULTI CID FTMS 0 0 0 9873 1040452.8125 0.6512345734552605 -7 0.6339988708496094 7 Unmodified _LPPPTPSQI_ ENSG00000083223|ENST00000375963|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 78.14939416004806 0.0179651292570206 4 [{I|L}P]P[TP][PS]Q{I|L} 9 0 + 55.185 0.0 0.0 5.818 5.818 82.442 0.0 0.0 0.0 7.269987279362624 14.09256854528806 7.269987279362624 7.269987279362624 0 1.0356668758921828 2.0 0.9247425010840048 0.5 + + [{I|L}P]P[TP][PS]Q{I|L};{[HG]|PP}TP{I|L}[PS]Q{I|L};[{I|L}P]P[DG][{I|L}P]Q{I|L};[{I|L}P]P[PG]{NN|[MP]|[D{I|L}]|[EV]}Q{I|L};{[HG]|PP}TPS[{I|L}P]Q{I|L};[{I|L}P]P[DG]Q[{I|L}P]{I|L};{[HG]|PP}TP{I|L}[PS][AG]{I|L};{[HG]|PP}TPSQ[{I|L}P]{I|L};{[HG]|PP}{I|L}[TP][PS]Q{I|L};{[HG]|PP}TPS[{I|L}P][AG]{I|L} 5.818;5.0515;4.8148;4.2278;4.0483;3.9656;3.5536;3.1992;2.6269;2.5504 +;-;-;-;-;-;-;-;-;- + 408 1 1.664 46402.8 1.0 5252 4626 9873 HBL1_DMSO_200M_050219_2,9880 HBL1_DMSO_200M_050219_2,9880,LPPPTPSQI True True LPPPTPSQI 53.680392 475.271655261517 80273478.0 9873.0 nc|ENSG00000083223|Q5VYS8-5|TUT7;;nc|ENSG00000083223|Q5VYS8-4|TUT7;;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;;nc|ENSG00000083223|Q5VYS8-3|TUT7;;nc|ENSG00000083223|Q5VYS8-2|TUT7;;ENSG00000083223|ENST00000375963|TUT7;;nc|ENSG00000083223|Q5VYS8-6|TUT7 5.163632392883301 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9881 53.682 55.0 799400.0 25 0 112530.0 + + -1 YQLENYCN 8 80 523.7157038239675 1045.4168547147349 2 523.7164184451103 MULTI CID FTMS 0 0 0 9873 1026965.3125 0.5734345583745177 2 -0.1871452331542968 8 Oxidation (M) _TTVAM(Oxidation (M))QYCGG_ ENSG00000254647|ENST00000381330|INS 10.073929032068715 0.6785112666868882 4 [YQ]{I|L}DQ 5 -1 29.08 0.0 0.0 2.7817 0.0 0.0 0.0 395.10109478725366 395.10109478725366 4.616356081644639 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6861818737241735 [YQ]{I|L}DQ 2.7817 - 78 1 1.664 43436.8 1.0 5253 4626 9873 HBL1_DMSO_200M_050219_2,9881 HBL1_DMSO_200M_050219_2,9881,TTVAMQYCGG False False YQLENYCN 53.681804 523.71641844511 25933242.0 9873.0 ENSG00000254647|ENST00000381330|INS 6.15169095993042 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9882 53.683 36.0 1357500.0 25 0 103920.0 41606 VPPLATNTV 9 81 456.2635930417542 910.5126331503084 2 456.2637206912041 MULTI CID FTMS 0 0 0 9873 806615.25 0.1234292090022048 15 -1.2267532348632812 9 Unmodified _VPPLATNTV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 23.1484247019978 0.2366544122328345 4 [VP][VS]PNVTV 9 5 + 29.828 0.0 0.0 3.276 3.276 64.603 0.0 0.0 0.0 1.4860265480609378 3.7853061498520937 1.4860265480609378 1.4860265480609378 0 0.6237125054200234 2.0 0.0 0.0 [VP][VS]PNVTV;[{I|L}P]PATNVTV;[{I|L}P]APTNVTV;[{I|L}P]ATPNVTV;[{I|L}P]PATGGVTV;[{I|L}P]APTGGVTV;[{I|L}P]ATPGGVTV;[PS]VVPNVTV;[{I|L}T][PA]PNVTV 3.276;3.1128;2.9194;2.6757;2.1015;1.9081;1.6644;0.94221;0.6702 -;-;-;-;-;-;-;-;- 294 1 1.664 43171.0 1.0 5254 4626 9873 HBL1_DMSO_200M_050219_2,9882 HBL1_DMSO_200M_050219_2,9882,VPPLATNTV False True SDAPGVPRI 53.682984 456.263720691204 24305862.0 9873.0 nc|ENSG00000118260|P16220-1|CREB1;;ENSG00000118260|ENST00000353267|CREB1;;ENST00000480189.5_1_2:208424955-208436489:+|nuORF;;nc|ENSG00000118260|P16220-3|CREB1 1.587973674138387 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9883 53.685 84.0 608390.0 25 0 46609.0 + 13958 HYQAIVTAY 9 80 533.2719814109029 1064.5294098886056 2 533.2720825076103 MULTI CID FTMS 0 0 0 9873 790802.0 0.7034903213058039 -1 0.0838546752929687 10 Unmodified _HYQAIVTAY_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 28.486842064014134 0.1687311288560894 4 {[WN]|[YH]}QA{I|L}V 6 3 36.955 0.0 0.0 3.4715 0.0 0.0 0.0 350.13387604335645 350.13387604335645 13.46787486224656 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 + {[WN]|[YH]}QA{I|L}V 3.4715 + + 174 1 1.664 44413.3 1.0 5255 4626 9873 HBL1_DMSO_200M_050219_2,9883 HBL1_DMSO_200M_050219_2,9883,HYQAIVTAY False True HYQAIVTAY 53.684888 533.27208250761 17768022.0 9873.0 ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 7.152111371358235 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9884 53.687 76.0 587860.0 25 0 42332.0 15201 IPESGTEDNV 10 93 530.7435245140377 1059.4724960948754 2 530.7438232302666 MULTI CID FTMS 0 0 0 9873 638174.0625 0.6474552936687862 -9 0.7982597351074219 11 Unmodified _IPESGTEDNV_ ENSG00000163520|ENST00000404922|FBLN2;nc|ENSG00000163520|P98095|FBLN2 29.081581746732265 0.3152867722954398 4 {I|L}PEPT[C(Carbamidomethyl (C))M]NV 9 4 + 56.357 0.0 0.0 5.3193 5.3193 88.12 0.0 0.0 0.0 39.85892340822657 5.2058755708423945 5.2058755708423945 56.356895520748495 0 1.1677353201839438 2.0 0.0 0.6139829889124311 {I|L}PEPT[C(Carbamidomethyl (C))M]NV 5.3193 - 230 + 1 1.664 39648.0 1.0 5256 4626 9873 HBL1_DMSO_200M_050219_2,9884 HBL1_DMSO_200M_050219_2,9884,IPESGTEDNV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9885 53.691 238.0 262980.0 25 0 16732.0 + 35333 STAAKIMGV 9 93 439.2440340794108 876.4735152256216 2 439.2442504763603 MULTI CID FTMS 0 0 0 9873 397614.15625 0.3210783489884747 2 -0.1871452331542968 12 Unmodified _STAAKIMGV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 57.47134341890925 0.0274820932774257 4 {[MG]|[TS]}AAY{I|L}AAG 9 4 36.027 0.0 0.0 4.1105 0.0 0.0 0.0 68.05139337711171 68.05139337711171 17.839862491657858 0.0 0.0 0.0 0 0.9361818737241734 0.0 0.0 0.0 {[MG]|[TS]}AAY{I|L}AAG 4.1105 - 300 + 1 1.664 53351.9 1.0 5257 4626 9873 HBL1_DMSO_200M_050219_2,9885 HBL1_DMSO_200M_050219_2,9885,STAAKIMGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9886 53.694 137.0 519940.0 25 0 69875.0 -1 SHVAVENALG 10 100 519.7641816929032 1037.5138104526063 2 519.7645751833916 MULTI CID FTMS 0 0 0 9873 393587.875 0.3434651099142936 2 -0.1871452331542968 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SHVAVENALG_ ENSG00000215301|ENST00000644876|DDX3X;ENST00000480592.5_1_X:41193505-41196960:+|nuORF;nc|ENSG00000215301|O00571-2|DDX3X 19.361941925380144 0.5226674314761524 4 {[YC]|[HE]}VAVENAAV 10 -1 + 56.714 0.0 0.0 5.4663 5.4663 82.73 0.0 0.0 0.0 5.862435673934279 46.532762526793725 5.862435673934279 9.164539485499256 0 0.4731975075880329 0.958607314841775 0.0 0.0 {[YC]|[HE]}VAVENAAV;{[YC]|[HE]}VAVEGGAAV;{[YC]|[HE]}VAVE{I|L}{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}HAVENAAV;[{I|L}A][HD]VENAAV;{NN|[MP]|[D{I|L}]|[EV]}HAVEGGAAV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NEV[{M(Oxidation (M))|F}T]AV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NEVA[{M(Oxidation (M))|F}T]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EV[{M(Oxidation (M))|F}T]AV;{NN|[MP]|[D{I|L}]|[EV]}HAVE{I|L}{[QN]|[E{I|L}]|[KN]} 5.4663;4.583;4.0905;3.9367;3.4194;3.0534;2.8985;2.7067;2.6083;2.5609 -;-;-;-;-;-;-;-;-;- 263 1 1.664 61226.4 1.0 5258 4626 9873 HBL1_DMSO_200M_050219_2,9886 HBL1_DMSO_200M_050219_2,9886,SHVAVENALG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9887 53.708 800.0 116260.0 25 0 26759.0 -1 0 31 1123.4484671750083 3367.323572125225 3 1124.117236316204 MULTI CID FTMS 0 0 0 9873 314232.34375 0.5147823427516764 2 -0.1871452331542968 14 4 E 1 -1 6.9897 0.0 0.0 0.20757 0.0 0.0 2711.0948237142748 524.1636446588499 3235.2584683731247 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20757 - 4 + 1 1.664 83259.9 0.9399999976158142 5259 4626 9873 HBL1_DMSO_200M_050219_2,9887 HBL1_DMSO_200M_050219_2,9887, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9888 53.712 255.0 356780.0 25 0 23311.0 + 33220 SFLRGTTSY 9 125 516.2612865228263 1030.5080201124524 2 516.2623168826103 MULTI CID FTMS 0 0 0 9873 298952.4375 0.2286154833821624 3 -0.2729988098144531 15 Unmodified _SFLRGTTSY_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 47.594388314883695 0.0456443387682827 4 {[QN]|[E{I|L}]|[KN]}K[YQ]TSY 8 5 + 51.793 0.0 0.0 5.026 5.026 85.074 0.0 0.0 0.0 8.293330022372047 32.66600242891377 8.293330022372047 19.039125714637507 0 1.0 1.0 1.0189301784845295 0.0 {[QN]|[E{I|L}]|[KN]}K[YQ]TSY;[{I|L}A]YR{[SA]|[TG]}TSY;[{I|L}A]YR{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SY;[{I|L}A]YCRRSY;{[{M(Oxidation (M))|F}C]|[YS]}{[TV]|[{I|L}S]}RRSY;{[MG]|[TS]}[YV]RRSY;{[SA]|[TG]}G{[QN]|[E{I|L}]|[KN]}[EP]{I|L}{[ES]|[DT]|[{I|L}C]};[HM]T{[SA]|[TG]}R{I|L}C{I|L};{NN|[MP]|[D{I|L}]|[EV]}G[PG]{I|L}M{I|L}{[ES]|[DT]|[{I|L}C]};{[{M(Oxidation (M))|F}C]|[YS]}{[TV]|[{I|L}S]}[RK]DY 5.026;3.1784;2.2107;2.1457;1.7969;1.6863;1.2255;1.1597;1.0823;0.68041 -;-;-;-;-;-;-;-;-;- 486 1 1.664 73810.1 1.0 5260 4626 9873 HBL1_DMSO_200M_050219_2,9888 HBL1_DMSO_200M_050219_2,9888,SFLRGTTSY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9889 53.716 166.0 436270.0 25 0 51568.0 + 22039 LPPPPPPAM 9 106 458.751710776598 915.488868619996 2 458.7518493533134 MULTI CID FTMS 0 0 0 9873 261828.1875 0.0591986138208229 46 -3.915000915527344 16 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP 6 3 45.195 0.0 0.0 4.9367 0.0 0.0 0.0 314.116691553964 314.116691553964 28.20493438421167 0.0 0.0 0.0 0 1.1549471895720984 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 4.9367 + + 195 1 1.664 58085.6 1.0 5261 4626 9873 HBL1_DMSO_200M_050219_2,9889 HBL1_DMSO_200M_050219_2,9889,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9890 53.73 800.0 150430.0 25 0 8804.9 -1 WRRECPRWWRC 11 105 874.4135628006702 0 874.4149658083916 PEAK CID FTMS 0 0 0 9873 154456.46875 0.2691566498632327 -10 0.8190650939941406 17 2 Carbamidomethyl (C) _WRREC(Carbamidomethyl (C))PRWWRC(Carbamidomethyl (C))_ ENST00000599470.5_2_19:39616427-39616532:+|nuORF 0.2690200627634905 0.4761840153648598 4 PN{I|L}NADQ 7 -1 47.216 0.0 0.0 2.703 0.0 0.0 261.08138407461416 730.3654879205686 991.4468719951828 0.0 0.0 0.0 0.0 0 1.1861818737241734 0.0 0.0 0.805462187404089 PN{I|L}NADQ 2.703 - 1328 + 1 1.664 85312.8 0.7699999809265137 5262 4626 9873 HBL1_DMSO_200M_050219_2,9890 HBL1_DMSO_200M_050219_2,9890,WRRECPRWWRC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9891 53.745 800.0 66553.0 25 0 12240.0 -1 0 47 1104.4635649682075 3310.3688655048227 3 1104.799975574017 MULTI CID FTMS 0 0 0 9873 114948.1796875 1.0 0 0.0 18 4 E 1 -1 6.9897 0.0 0.0 0.21115 0.0 0.0 2654.141076816401 524.1623629205686 3178.30343973697 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21115 - 9 + 1 1.664 49036.8 0.5899999737739563 5263 4626 9873 HBL1_DMSO_200M_050219_2,9891 HBL1_DMSO_200M_050219_2,9891, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9892 53.758 800.0 80773.0 25 0 8442.4 + 19406 YEEIAQRSKEEAEAL 15 101 589.2916812080999 0 589.2919189333916 PEAK CID FTMS 0 0 0 9873 97400.53125 1.0 0 0.0 19 Unmodified _LESQEFQPSI_ P35908;P35908v2;ENSG00000172867|ENST00000309680|KRT2 9.38312468134398 0.3794934366477728 4 PE 2 9 12.893 0.0 0.0 1.0958 0.0 0.0 815.3987483031154 132.04586206607658 947.444610369192 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1923877696554315 0.0 PE 1.0958 - 101 + 1 1.664 58476.0 0.75 5264 4626 9873 HBL1_DMSO_200M_050219_2,9892 HBL1_DMSO_200M_050219_2,9892,LESQEFQPSI False False YEEIAQRSKEEAEAL 53.758456 589.291918933392 1512782.25 9873.0 P35908;;P35908v2;;ENSG00000172867|ENST00000309680|KRT2 2.192810535430908 3.0 False 15.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9894 53.763 43.0 1908200.0 25 0 310230.0 + 32405 RYVPRASYF 9 71 386.8734837197688 1157.5986217595064 3 386.8732787966728 MULTI CID FTMS 0 0 0 9893 1161034.75 0.7918961978610405 1 -0.0973320007324218 1 Unmodified _RYVPRASYF_ ENSG00000112576|ENST00000372991|CCND3;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;nc|ENSG00000112576|P30281-3|CCND3 34.40172386719151 0.1061884637610825 4 VQ[VP]SY{M(Oxidation (M))|F} 7 4 43.805 0.0 0.0 3.7841 0.0 0.0 319.16523940254064 0.0 319.16523940254064 0.0 35.22115729114184 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.7302046884880937 VQ[VP]SY{M(Oxidation (M))|F} 3.7841 - 232 1 1.663 71235.4 1.0 5265 4627 9893 HBL1_DMSO_200M_050219_2,9894 HBL1_DMSO_200M_050219_2,9894,RYVPRASYF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9895 53.77 356.0 297110.0 25 0 66172.0 -1 0 86 925.4283341898752 1848.8421154465505 2 925.4293090701104 MULTI CID FTMS 0 0 0 9893 258597.84375 1.0 0 0.0 2 4 [NP]{I|L}T[HC]RQAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 64.752 0.0 0.0 3.5023 3.5023 74.605 0.0 0.0 0.0 3.768411687748099 42.26071599385144 3.768411687748099 8.494850021680094 0 2.048455006504028 0.0 0.0 0.4247425010840047 [NP]{I|L}T[HC]RQAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}TC(Carbamidomethyl (C))[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}T[HC]RQAEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}Q[HV]AEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}TC(Carbamidomethyl (C))Q[HV]AEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}T[HC]RQAEN{I|L}[HC][DV];[NP]{I|L}N{M(Oxidation (M))|F}N[H{I|L}]AEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[H{I|L}]NAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.5023;3.0428;2.88;2.8393;2.7848;2.622;2.5813;2.5282;2.5267;2.3799 -;-;-;-;-;-;-;-;-;- 2467 1 1.663 76783.9 1.0 5266 4627 9893 HBL1_DMSO_200M_050219_2,9895 HBL1_DMSO_200M_050219_2,9895, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9896 53.771 71.0 773300.0 25 0 63233.0 + 3270 AYHELAQVY 9 90 547.2694878370107 1092.5244227408214 2 547.2698242068291 MULTI CID FTMS 0 0 0 9893 552911.0 0.0342144317921427 -4 0.3795547485351562 3 Unmodified _AYHELAQVY_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 26.88365393820708 0.1891292719743517 4 [AG]{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}AGAVY 11 5 + 48.465 0.0 0.0 4.436 4.436 74.661 0.0 0.0 0.0 7.30600517172558 31.47495523993303 7.30600517172558 5.299410666261402 0 0.8935078169319297 1.154901959985743 0.0 0.7302046884880937 [AG]{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}AGAVY;[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}AQVY;[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}QAVY;[QA][WD]{I|L}AGAVY;[AG]A[WD]{I|L}AQVY;[AG]A[WD]{I|L}QAVY;[AG]A[WD]{I|L}AGAVY;[QA][WD]{I|L}AQVY;[QA][WD]{I|L}QAVY;[AG][DV][RD]AGAVY 4.436;3.951;3.8341;3.0872;2.9978;2.8809;2.8145;2.6061;2.4893;2.4442 -;-;-;-;-;-;-;-;-;- 181 1 1.663 50239.4 1.0 5267 4627 9893 HBL1_DMSO_200M_050219_2,9896 HBL1_DMSO_200M_050219_2,9896,AYHELAQVY False True AYHELAQVY 53.771277 547.269824206829 483512985.0 9893.0 nc|ENSG00000141030|Q9UNS2-2|COPS3;;ENSG00000141030|ENST00000268717|COPS3 8.278138001759848 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9897 53.775 181.0 437340.0 25 0 60408.0 -1 0 96 504.3010338162978 503.2937573496978 1 504.3014404177666 MULTI CID FTMS 0 0 0 9893 425540.0 0.5153774383698164 2 -0.1831855773925781 4 4 {I|L}A 2 -1 12.307 0.0 0.0 2.4453 0.0 0.0 301.1644764630875 0.0 301.1644764630875 0.0 0.0886438348021574 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A 2.4453 - 20 1 1.663 63849.7 1.0 5268 4627 9893 HBL1_DMSO_200M_050219_2,9897 HBL1_DMSO_200M_050219_2,9897, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9898 53.778 148.0 437370.0 25 0 31392.0 + 10069 LILENTSKV 9 90 508.77910317956525 1015.5436534259304 2 508.7805053591728 MULTI CID FTMS 0 0 0 9893 327083.0625 0.3531223962824683 19 -1.6508903503417969 5 Unmodified _FPRQQLDL_ ENSG00000105373|ENST00000246802|NOP53;ENST00000594525.5_1_19:48248816-48255954:+|nuORF;ENST00000598681.5_1_19:48248882-48259836:+|nuORF 18.13498045792455 0.6430038125133779 4 GTPE 4 8 38.443 0.0 0.0 3.7855 0.0 0.0 613.3541126935562 0.0 613.3541126935562 0.0 24.463950151760656 0.0 0.0 0 0.3252574989159953 0.0 0.3252574989159953 0.0 GTPE 3.7855 - 102 1 1.663 63042.7 1.0 5269 4627 9893 HBL1_DMSO_200M_050219_2,9898 HBL1_DMSO_200M_050219_2,9898,FPRQQLDL False False LILENTSKV 53.777729 508.780505359173 1385099.875 9893.0 ENSG00000105373|ENST00000246802|NOP53;;ENST00000594525.5_1_19:48248816-48255954:+|nuORF;;ENST00000598681.5_1_19:48248882-48259836:+|nuORF -0.5482799708843231 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9899 53.781 185.0 597340.0 25 0 40737.0 + 5887 DPYKVYRI 8 105 527.2900540911855 1052.565555249171 2 527.2905761599541 MULTI CID FTMS 0 0 0 9893 299818.25 0.0488465749646238 -4 0.3795547485351562 6 Unmodified _DPYKVYRI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 54.773552608820026 0.1167943196628344 4 DPYKV[YR]{I|L} 8 0 + 70.94 0.0 0.0 6.7397 6.7397 76.318 0.0 0.0 0.0 24.744237387763093 0.796896906561031 0.796896906561031 0.796896906561031 0 1.1861818737241734 1.5228787452803376 0.0 0.3494850021680094 + + DPYKV[YR]{I|L};DPYKV{I|L}[YR];DPYK{I|L}V[YR];DPYK{I|L}[YR]V;DPY{I|L}KV[YR];DPY{I|L}K[YR]V;DP{I|L}YKV[YR];DPPK{[RE]|[WV]}[QA]{I|L};DP{I|L}YK[YR]V;DPPK{[RE]|[WV]}{[NV]|[RG]}V 6.7397;6.664;6.378;6.0284;5.9247;5.5751;5.2352;4.9303;4.8856;4.505 +;-;-;-;-;-;-;-;-;- + 425 + 1 1.663 94130.8 1.0 5270 4627 9893 HBL1_DMSO_200M_050219_2,9899 HBL1_DMSO_200M_050219_2,9899,DPYKVYRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9900 53.786 257.0 569680.0 25 0 43644.0 -1 0 190 324.69396776949736 647.3733826057947 2 324.6938964724541 MULTI CID FTMS 0 0 0 9893 285956.96875 0.8531623034970001 -1 0.089813232421875 7 4 M 1 -1 3.9794 0.0 0.0 0.6147 0.0 0.0 323.21842762708224 190.08762537174064 513.3060529988229 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.6147 - 30 + 1 1.663 117541.7 1.0 5271 4627 9893 HBL1_DMSO_200M_050219_2,9900 HBL1_DMSO_200M_050219_2,9900, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9901 53.791 239.0 388750.0 25 0 60198.0 + 11363 LQYLHRNFIIHR 12 119 404.2460025652344 806.4774521972688 2 404.2457458376884 MULTI CID FTMS 0 0 0 9893 256395.25 1.0 0 0.0 8 Unmodified _GGAKPHIK_ ENST00000504473.5_1_16:89753600-89759778:+|nuORF;nc|ENSG00000185324|Q15131-2|CDK10;ENSG00000185324|ENST00000353379|CDK10;ENST00000378277.8_1_16:89756998-89758964:+|nuORF;ENST00000505733.5_1_16:89753118-89759778:+|nuORF;nc|ENSG00000185324|Q15131-3|CDK10;nc|ENSG00000185324|Q15131-4|CDK10;nc|ENSG00000185324|Q15131-5|CDK10;ENST00000561477.1_1_16:89758247-89760641:+|nuORF;nc|ENSG00000185324|Q15131-7|CDK10 2.889219685676258 0.8067950007271085 4 {I|L}{I|L}{I|L}HR 5 7 50.812 0.0 0.0 6.3004 0.0 0.0 156.05351528496254 0.0 156.05351528496254 0.0 42.18244309785021 0.0 0.0 0 1.16944517631652 0.0 0.0 0.7179001828205485 {I|L}{I|L}{I|L}HR 6.3004 - 61 + 1 1.663 74650.9 1.0 5272 4627 9893 HBL1_DMSO_200M_050219_2,9901 HBL1_DMSO_200M_050219_2,9901,GGAKPHIK False False LQYLHRNFIIHR 53.790554 404.245745837688 2304223.25 9893.0 ENST00000504473.5_1_16:89753600-89759778:+|nuORF;;nc|ENSG00000185324|Q15131-2|CDK10;;ENSG00000185324|ENST00000353379|CDK10;;ENST00000378277.8_1_16:89756998-89758964:+|nuORF;;ENST00000505733.5_1_16:89753118-89759778:+|nuORF;;nc|ENSG00000185324|Q15131-3|CDK10;;nc|ENSG00000185324|Q15131-4|CDK10;;nc|ENSG00000185324|Q15131-5|CDK10;;ENST00000561477.1_1_16:89758247-89760641:+|nuORF;;nc|ENSG00000185324|Q15131-7|CDK10 0.2108340263366699 4.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9902 53.804 800.0 230190.0 25 0 30369.0 + 14588 IIDENGVHEL 10 162 569.790415976697 1137.566279020194 2 569.7906371951103 MULTI CID FTMS 0 0 0 9893 157422.65625 0.7810029097349611 -1 0.089813232421875 9 Unmodified _IIDENGVHEL_ ENSG00000117143|ENST00000367925|UAP1;nc|ENSG00000117143|Q16222-2|UAP1;nc|ENSG00000117143|Q16222-3|UAP1 55.50274090549119 0.048383292844968 4 {I|L}{I|L}DENRVY 8 4 79.322 0.0 0.0 6.9729 0.0 0.0 0.0 132.0460146539672 132.0460146539672 57.482237386016806 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.7302046884880937 0.4247425010840047 {I|L}{I|L}DENRVY 6.9729 - 3837 + 1 1.663 136548.6 0.8399999737739563 5273 4627 9893 HBL1_DMSO_200M_050219_2,9902 HBL1_DMSO_200M_050219_2,9902,IIDENGVHEL True True IIDENGVHEL 53.804385 569.79063719511 1314971.625 9893.0 ENSG00000117143|ENST00000367925|UAP1;;nc|ENSG00000117143|Q16222-2|UAP1;;nc|ENSG00000117143|Q16222-3|UAP1 5.801685810089111 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9903 53.807 152.0 353780.0 25 0 32859.0 + 35425 STLDGSLHAV 10 112 500.2590545337515 998.503556134303 2 500.2583190798759 MULTI CID FTMS 0 0 0 9893 158277.953125 1.0 0 0.0 10 Unmodified _STLDGSLHAV_ ENSG00000178607|ENST00000433197|ERN1;ENST00000583028.1_1_17:62175367-62207458:-|nuORF;ENST00000584041.1_1_17:62152499-62207458:-|nuORF 20.453626601364224 0.5043500229302764 4 PS{I|L} 3 8 14.085 0.0 0.0 1.4106 0.0 0.0 683.3233326009031 0.0 683.3233326009031 0.0 1.320728540337626 0.0 0.0 0 0.0 0.0 0.6505149978319906 0.0 PS{I|L} 1.4106 - 264 + 1 1.663 46797.7 1.0 5274 4627 9893 HBL1_DMSO_200M_050219_2,9903 HBL1_DMSO_200M_050219_2,9903,STLDGSLHAV False True STLDGSLHAV 53.807412 500.258319079876 1193779.5 9893.0 ENST00000583028.1_1_17:62175367-62207458:-|nuORF;;ENSG00000178607|ENST00000433197|ERN1;;ENST00000584041.1_1_17:62152499-62207458:-|nuORF 5.806642850240071 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9904 53.821 800.0 185080.0 25 0 13536.0 26742 PAADILNHLAN 11 149 574.8059998429891 1147.597446752778 2 574.8057128787041 MULTI CID FTMS 0 0 0 9893 136654.734375 0.8546330792597423 -1 0.089813232421875 11 Unmodified _PAADILNHLAN_ ENSG00000103037|ENST00000219315|SETD6;ENST00000467320.1_1_16:58550403-58550922:+|nuORF;nc|ENSG00000103037|Q8TBK2-2|SETD6 23.78978130925829 0.5336113198261219 4 {NN|[MP]|[D{I|L}]|[EV]}GS{I|L}{I|L}TQV 9 8 53.349 0.0 0.0 4.6488 0.0 0.0 0.0 218.0596409268593 218.0596409268593 22.78533243198608 0.0 0.0 0.0 0 0.0 1.3979400086720375 2.059894379144197 0.0 {NN|[MP]|[D{I|L}]|[EV]}GS{I|L}{I|L}TQV 4.6488 - 4033 1 1.663 111681.4 0.7900000214576721 5275 4627 9893 HBL1_DMSO_200M_050219_2,9904 HBL1_DMSO_200M_050219_2,9904,PAADILNHLAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9905 53.835 800.0 207070.0 25 0 26803.0 -1 0 71 1093.777961524105 3278.312055172515 3 1094.444873034954 MULTI CID FTMS 0 0 0 9893 124255.703125 1.0 0 0.0 12 4 YG{[DS]|[MA]|[CV]|TT}YVEA{I|L}E 10 -1 34.36 0.0 0.0 1.0481 0.0 0.0 1780.6219439438023 368.1369941728369 2148.7589381166395 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 YG{[DS]|[MA]|[CV]|TT}YVEA{I|L}E 1.0481 - 1001 + 1 1.663 118983.9 0.5899999737739563 5276 4627 9893 HBL1_DMSO_200M_050219_2,9905 HBL1_DMSO_200M_050219_2,9905, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9906 53.848 658.0 404530.0 25 0 40963.0 -1 0 243 336.2036738615343 335.1963973949343 1 336.2016479372978 MULTI CID FTMS 0 0 0 -1 0 13 4 {I|L} 1 -1 10.713 0.0 0.0 3.1961 0.0 0.0 204.1013484220812 0.0 204.1013484220812 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.1961 - 33 + 1 1.663 209133.0 1.0 5277 4627 9893 HBL1_DMSO_200M_050219_2,9906 HBL1_DMSO_200M_050219_2,9906, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9907 53.856 439.0 564860.0 25 0 74099.0 + 44897 YPPPAPGI 8 171 406.2212944505399 810.4280359678799 2 406.2214538455009 MULTI CID FTMS 0 0 0 9893 105595.4453125 0.3812328425410662 13 -1.0435867309570312 14 Unmodified _YPPPAPGI_ ENSG00000205352|ENST00000429243|PRR13;nc|ENSG00000205352|Q9NZ81-2|PRR13 41.81723621529253 0.2038889569391319 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVP 5 5 41.797 0.0 0.0 5.1574 0.0 0.0 0.0 222.12427113055 222.12427113055 22.85458232427736 0.0 0.0 0.0 0 0.4802046884880938 1.6989700043360187 0.3807196863200844 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVP 5.1574 - 640 1 1.663 195588.5 1.0 5278 4627 9893 HBL1_DMSO_200M_050219_2,9907 HBL1_DMSO_200M_050219_2,9907,YPPPAPGI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9909 53.86 7.0 8415300.0 25 0 1242200.0 + 21889 LPPEVNRI 8 54 469.27679076482383 936.5390285964476 2 469.2772704958916 MULTI CID FTMS 0 0 0 9908 8406642.0 0.942636125166597 4 -0.2630081176757812 1 Unmodified _LPPEVNRI_ ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 14.838274106304384 0.6917062315640577 4 {I|L}PPE 4 4 53.175 0.0 0.0 5.6779 0.0 0.0 0.0 497.2859896295532 497.2859896295532 46.18562527100117 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPE 5.6779 + + 25 + 1 1.663 51250.5 1.0 5279 4628 9908 HBL1_DMSO_200M_050219_2,9909 HBL1_DMSO_200M_050219_2,9909,LPPEVNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9910 53.861 6.9 8332800.0 25 0 2017500.0 + 15067 IMHIQSNFL 9 85 368.19447723393614 1101.5616023020084 3 368.1943542361259 MULTI CID FTMS 0 0 0 9908 7827004.5 0.8115967854273926 7 -0.4273872375488281 2 Unmodified _IMHIQSNFL_ REV__ENSG00000157578|ENST00000288350|LCA5L 12.531546534597751 0.4974689918368763 4 E{I|L}{M(Oxidation (M))|F} 3 -1 24.693 0.0 0.0 2.2416 0.0 0.0 694.3563400084814 0.0 694.3563400084814 0.0 10.708253071758874 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}{M(Oxidation (M))|F} 2.2416 - 109 1 1.663 52544.1 1.0 5280 4628 9908 HBL1_DMSO_200M_050219_2,9910 HBL1_DMSO_200M_050219_2,9910,IMHIQSNFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9911 53.863 15.0 3691700.0 25 0 383790.0 + 9953 FPGKHFQEI 9 81 551.7875691100098 1101.5605852868196 2 551.7879516482353 MULTI CID FTMS 0 0 0 9908 3656732.75 0.7808074207108664 7 -0.4273872375488281 3 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 46.0223103267499 0.0490911897871712 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E 9 3 + 59.223 0.0 0.0 5.3763 5.3763 72.129 0.0 0.0 0.0 18.09385934535719 1.5051499783199065 1.5051499783199065 1.5051499783199065 0 0.805462187404089 1.6989700043360187 1.0 0.8807196863200843 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQE{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H{M(Oxidation (M))|F}Q{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H{M(Oxidation (M))|F}QE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]E{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H{M(Oxidation (M))|F}[AG]{I|L}E;[KG]P{M(Oxidation (M))|F}HQE{M(Oxidation (M))|F}{I|L} 5.3763;5.2396;5.0746;4.8344;4.5404;4.5328;4.4037;4.2387;3.9985;3.7337 -;-;-;-;-;+;-;-;-;- + 1035 1 1.663 51969.8 1.0 5281 4628 9908 HBL1_DMSO_200M_050219_2,9911 HBL1_DMSO_200M_050219_2,9911,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9912 53.864 29.0 2254100.0 25 0 211700.0 + 4167 DAPHPPLKI 9 105 494.2848575762056 986.5551622192112 2 494.2846252322197 MULTI CID FTMS 0 0 0 9908 1451232.125 0.0393115720119938 -14 1.0757331848144531 4 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 36.12702656103203 0.0967173616627612 4 {[DA]|[EG]}PHP[{I|L}P]K{I|L} 9 0 + 49.063 0.0 0.0 4.9732 4.9732 85.502 0.0 0.0 0.0 30.123337350737245 10.379099962974152 10.379099962974152 24.916892907146178 0 1.274227503252014 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}PHP[{I|L}P]K{I|L};{[DA]|[EG]}{[WN]|[YH]}[K{I|L}]K{I|L} 4.9732;2.4476 +;- + 150 + 1 1.663 55428.4 1.0 5282 4628 9908 HBL1_DMSO_200M_050219_2,9912 HBL1_DMSO_200M_050219_2,9912,DAPHPPLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9913 53.865 34.0 2271100.0 25 0 247170.0 + 4161 DAPHPPLKI 9 87 329.85914441787924 986.5556038538376 3 329.8588744997978 MULTI CID FTMS 0 0 0 9908 1455042.0 0.0380253501288852 -14 1.0757331848144531 5 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 14.838274106304384 0.4350285940865338 4 {I|L}H[HQ] 4 8 14.693 0.0 0.0 1.4893 0.0 0.0 453.29456610654046 0.0 453.29456610654046 0.0 3.855282168095213 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}H[HQ] 1.4893 - 36 1 1.663 69353.7 1.0 5283 4628 9908 HBL1_DMSO_200M_050219_2,9913 HBL1_DMSO_200M_050219_2,9913,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9914 53.866 35.0 1976600.0 25 0 116520.0 + 5890 DPYKVYRI 8 85 351.8626635825482 1052.5661613478446 3 351.8624450564384 MULTI CID FTMS 0 0 0 9908 1400137.875 0.3035801091783394 -3 0.2709999084472656 6 Unmodified _DPYKVYRI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 28.486842064014134 0.4448922141344407 4 DPYKVYR{I|L} 8 0 + 73.974 0.0 0.0 7.028 7.028 86.074 0.0 0.0 0.0 33.3994806169435 6.361791744765625 6.361791744765625 6.361791744765625 0 0.0 1.6989700043360187 0.0 0.4247425010840047 + + DPYKVYR{I|L};DPYKV{I|L}[YR];DPYK{I|L}V[YR];DPY{I|L}KV[YR];DP{I|L}YKV[YR] 7.028;6.4236;6.1376;5.6843;4.9948 +;-;-;-;- + 110 + 1 1.663 68493.1 1.0 5284 4628 9908 HBL1_DMSO_200M_050219_2,9914 HBL1_DMSO_200M_050219_2,9914,DPYKVYRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9915 53.867 38.0 1491000.0 25 0 328180.0 + 14941 ILMEHIHKL 9 79 378.55491615673407 1132.6429190704025 3 378.5548278689384 MULTI CID FTMS 0 0 0 9908 1219505.125 0.0811929666746716 4 -0.2630081176757812 7 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 42.312485326615175 0.0627620958981271 4 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 86.035 0.0 0.0 7.5959 7.5959 95.617 0.0 0.0 0.0 70.62856106805847 9.07831620036704 9.07831620036704 32.71775040875461 0 0.6747425010840047 2.0 0.4247425010840047 0.0 + + {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}M{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QQK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQK{I|L} 7.5959;4.7073;4.4415 +;-;- + 247 + 1 1.663 51679.9 1.0 5285 4628 9908 HBL1_DMSO_200M_050219_2,9915 HBL1_DMSO_200M_050219_2,9915,ILMEHIHKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9916 53.868 37.0 1366800.0 25 0 136390.0 + 31349 RMVAEIQNV 9 89 530.2841777241114 1058.5538025150229 2 530.2849609255791 MULTI CID FTMS 0 0 0 9908 1109622.5 1.0 0 0.0 8 Unmodified _RMVAEIQNV_ chr2:230235075-230237083|42|11.86|0.22|5.72|+|1|SP140,SP140|2;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000473711.1_1_2:231090559-231102095:+|nuORF;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 31.26834338654808 0.1333407332142048 4 AE{I|L}QNV 6 3 49.188 0.0 0.0 4.6467 0.0 0.0 386.21153456855626 0.0 386.21153456855626 0.0 30.402215944156904 0.0 0.0 0 0.805462187404089 0.0 0.3252574989159953 0.0 + AE{I|L}QNV 4.6467 + + 310 1 1.663 46570.4 1.0 5286 4628 9908 HBL1_DMSO_200M_050219_2,9916 HBL1_DMSO_200M_050219_2,9916,RMVAEIQNV False True RMVAEIQNV 53.868455 530.284960925579 7372909.5 9908.0 chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;;nc|ENSG00000079263|Q13342-5|SP140;;chr2:230235075-230237083|42|11.86|0.22|5.72|+|1|SP140,SP140|2;;nc|ENSG00000079263|Q13342-2|SP140;;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-6|SP140;;nc|ENSG00000079263|Q13342-4|SP140;;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;;ENST00000473711.1_1_2:231090559-231102095:+|nuORF;;ENSG00000079263|ENST00000392045|SP140;;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-3|SP140 8.219246864318848 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9917 53.87 41.0 974690.0 25 0 86160.0 + 30653 RFPDGTNGL 9 82 488.7464410504657 975.4783291677312 2 488.7457763552666 MULTI CID FTMS 0 0 0 9908 936514.6875 0.6094979888183442 -9 0.8211441040039062 9 Unmodified _RFPDGTNGL_ ENSG00000164442|ENST00000367651|CITED2;nc|ENSG00000164442|Q99967-2|CITED2 31.26834338654808 0.1333407332142048 4 {[VA]|[{I|L}G]}N[KC]GTNG{I|L} 10 5 + 55.495 0.0 0.0 5.689 5.689 78.669 0.0 0.0 0.0 4.318722087674658 16.532125137753432 4.318722087674658 4.318722087674658 0 0.8807196863200843 1.3979400086720375 0.3494850021680094 0.3807196863200844 {[VA]|[{I|L}G]}N[KC]GTNG{I|L};[R{M(Oxidation (M))|F}][DP]GTNG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTNG{I|L};{[VA]|[{I|L}G]}N[C(Carbamidomethyl (C))K]TNG{I|L};{[VA]|[{I|L}G]}N[KC]GTGGG{I|L};[NG]{I|L}[KC]GTNG{I|L};{[VA]|[{I|L}G]}GG[KC]GTNG{I|L};[R{M(Oxidation (M))|F}][DP]GTGGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTGGG{I|L};{[VA]|[{I|L}G]}N[KC]GG{[SA]|[TG]}G{I|L} 5.689;5.2462;5.054;5.0193;4.7495;4.4147;4.3592;4.3023;4.11;4.0826 -;+;-;-;-;-;-;-;-;- + 230 1 1.663 37571.1 1.0 5287 4628 9908 HBL1_DMSO_200M_050219_2,9917 HBL1_DMSO_200M_050219_2,9917,RFPDGTNGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9918 53.871 69.0 629350.0 25 0 45008.0 + 32531 SALTSSAVTSV 11 87 511.7722309059197 0 511.7720214724541 PEAK CID FTMS 0 0 0 9908 664075.375 0.9568621581456704 -2 0.1871452331542968 10 Unmodified _SALTSSAVTSV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 21.53697664764585 0.3337597044351383 4 TS 2 9 11.211 0.0 0.0 1.0975 0.0 0.0 716.3703762632082 114.05665002994374 830.4270262931519 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + TS 1.0975 + + 74 + 1 1.663 37720.3 1.0 5288 4628 9908 HBL1_DMSO_200M_050219_2,9918 HBL1_DMSO_200M_050219_2,9918,SALTSSAVTSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9919 53.873 98.0 567300.0 25 0 63299.0 + 4178 DAPIGPHL 8 69 410.2217440023912 818.4289350715824 2 410.2216979861259 MULTI CID FTMS 0 0 0 9908 589109.875 0.1375956859068503 4 -0.2630081176757812 11 Unmodified _DAPIGPHL_ ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A 36.46614268402704 0.2934124525509074 4 {[DA]|[EG]}P{I|L}GP[H{I|L}] 8 0 + 59.258 0.0 0.0 7.2404 7.2404 95.41 0.0 0.0 0.0 52.60213141451892 5.1849178312658495 5.1849178312658495 59.25759390300961 0 0.6861818737241735 2.0 0.0 0.0 + + {[DA]|[EG]}P{I|L}GP[H{I|L}] 7.2404 + + 45 + 1 1.663 51035.1 1.0 5289 4628 9908 HBL1_DMSO_200M_050219_2,9919 HBL1_DMSO_200M_050219_2,9919,DAPIGPHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9920 53.878 233.0 313280.0 25 0 24233.0 -1 EVLQYCQEV 9 94 584.2699492647192 1166.5253455962384 2 584.2704955935478 MULTI CID FTMS 0 0 0 9908 326676.15625 1.0 0 0.0 12 Carbamidomethyl (C) _EVLQYC(Carbamidomethyl (C))QEV_ ENST00000533532.5_1_11:129939872-129979518:+|nuORF 10.823927491677226 0.5436922275383211 4 {[WT]|[RM]}{I|L}GQ{I|L}C(Carbamidomethyl (C)) 7 -1 31.19 0.0 0.0 2.6738 0.0 0.0 0.0 305.0824494382884 305.0824494382884 12.695407399542304 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3494850021680094 {[WT]|[RM]}{I|L}GQ{I|L}C(Carbamidomethyl (C)) 2.6738 - 159 1 1.663 57713.2 1.0 5290 4628 9908 HBL1_DMSO_200M_050219_2,9920 HBL1_DMSO_200M_050219_2,9920,EVLQYCQEV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9921 53.883 299.0 316350.0 25 0 26147.0 8767 EVSTNTIEQGP 11 122 587.7844079497501 1173.5542629663 2 587.7851440310478 MULTI CID FTMS 0 0 0 9908 334751.09375 0.6374876380053273 -2 0.1871452331542968 13 Unmodified _EVSTNTIEQGP_ ENSG00000185860|ENST00000367912|CCDC190;nc|ENSG00000185860|Q86UF4-2|CCDC190;nc|ENSG00000185860|Q86UF4|CCDC190 34.93206674587334 0.2904649469012649 4 {[TV]|[{I|L}S]}AAEATV 8 8 61.75 0.0 0.0 5.2618 0.0 0.0 0.0 428.1431661247563 428.1431661247563 20.090277301079706 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 2.353917193908117 0.0 {[TV]|[{I|L}S]}AAEATV 5.2618 - 4441 1 1.663 76572.5 1.0 5291 4628 9908 HBL1_DMSO_200M_050219_2,9921 HBL1_DMSO_200M_050219_2,9921,EVSTNTIEQGP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9922 53.896 764.0 247780.0 25 0 25109.0 + -1 PARECRWCILQ 11 149 744.8609010535904 1487.7072491739807 2 744.8592407107353 MULTI CID FTMS 0 0 0 9908 282426.3125 0.9371041153751716 -1 0.0973320007324218 14 2 Carbamidomethyl (C) _PAREC(Carbamidomethyl (C))RWC(Carbamidomethyl (C))ILQ_ REV__ENSG00000112343|ENST00000357085|TRIM38 40.23920728925047 0.2087110615831976 4 PN{I|L}DADQRDG{M(Oxidation (M))|F}{I|L}Q 13 -1 + 148.27 0.0 0.0 9.9662 9.9662 92.209 0.0 0.0 0.0 8.327935343467118 13.319884478471067 8.327935343467118 8.327935343467118 0 4.2346368802282015 1.5228787452803376 1.586696871556164 1.7931576817365436 PN{I|L}DADQRDG{M(Oxidation (M))|F}{I|L}Q;NP{I|L}DADQRDG{M(Oxidation (M))|F}{I|L}Q;PN{I|L}DAD[AG]RDG{M(Oxidation (M))|F}{I|L}Q;PNNNADQRDG{M(Oxidation (M))|F}{I|L}Q;PN{I|L}DWQRDG{M(Oxidation (M))|F}{I|L}Q;PN{I|L}WDQRDG{M(Oxidation (M))|F}{I|L}Q;NP{I|L}DAD[AG]RDG{M(Oxidation (M))|F}{I|L}Q;PN{I|L}DADDD{I|L}{I|L}{M(Oxidation (M))|F}{I|L}Q;PN{I|L}DADQRDG{M(Oxidation (M))|F}Q{I|L};PN{I|L}DAD{[CA]|SS}[QP]G{M(Oxidation (M))|F}{I|L}Q 9.9662;9.4064;9.3563;9.062;9.0289;8.9783;8.7966;8.5909;8.5514;8.5388 -;-;-;-;-;-;-;-;-;- 57661 + 1 1.663 134385.9 1.0 5292 4628 9908 HBL1_DMSO_200M_050219_2,9922 HBL1_DMSO_200M_050219_2,9922,PARECRWCILQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9923 53.9 198.0 384240.0 25 0 21357.0 38954 TVNSEDSDE 9 137 498.194167062379 994.373781191558 2 498.1948119997978 MULTI CID FTMS 0 0 0 9908 270972.59375 1.0 0 0.0 15 Unmodified _TVNSEDSDE_ ENST00000339924.12_2_19:55351009-55359395:+|nuORF;nc|ENSG00000221957|P43632|KIR2DS4 10.073929032068715 0.563993802247229 4 {[QS]|[NT]}V 3 7 15.132 0.0 0.0 1.5217 0.0 0.0 0.0 677.1910168695455 677.1910168695455 3.3490038668001727 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7059771852360797 {[QS]|[NT]}V 1.5217 - 231 1 1.663 62850.7 1.0 5293 4628 9908 HBL1_DMSO_200M_050219_2,9923 HBL1_DMSO_200M_050219_2,9923,TVNSEDSDE False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 9924 53.905 234.0 511920.0 25 0 104740.0 -1 0 106 396.19537029210176 395.18809382550177 1 396.1951476931572 MULTI CID FTMS 0 0 0 9908 250122.28125 0.8906790823012442 -1 0.0973320007324218 16 4 M{M(Oxidation (M))|F}V 3 -1 + 29.654 0.0 0.0 7.5036 7.5036 89.359 0.0 0.0 0.0 8.711375162600703 8.711375162600703 8.711375162600703 8.711375162600703 0 0.4247425010840047 0.0 0.0 0.0 M{M(Oxidation (M))|F}V;{[YD]|[{M(Oxidation (M))|F}M]}V 7.5036;5.2993 -;- 21 + 1 1.663 100318.1 1.0 5294 4628 9908 HBL1_DMSO_200M_050219_2,9924 HBL1_DMSO_200M_050219_2,9924, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9925 53.908 142.0 721640.0 25 0 124050.0 + 6062 DSIIVKEV 8 117 451.76334433117455 901.5121357291492 2 451.7635681033134 MULTI CID FTMS 0 0 0 9908 229623.328125 0.112271774786436 -3 0.2709999084472656 17 Unmodified _DSIIVKEV_ ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79827372-79827747:-|nuORF 43.85829265575387 0.1697421968005898 4 {NN|[MP]|[D{I|L}]|[EV]}S{I|L}VKEV 8 2 {NN|[MP]|[D{I|L}]|[EV]}S + + 33.73 14.922 4.7349 3.7415 3.7415 47.884 0.0 0.0 0.0 0.0 11.747425010840049 0.0 0.0 0 0.7742275032520141 0.0 0.7059771852360797 0.0 {NN|[MP]|[D{I|L}]|[EV]}S{I|L}VKEV 3.7415 - 290 + 1 1.663 81159.3 1.0 5295 4628 9908 HBL1_DMSO_200M_050219_2,9925 HBL1_DMSO_200M_050219_2,9925,DSIIVKEV False True DSIIVKEV 53.907505 451.763568103313 14114222.0 9908.0 ENSG00000159399|ENST00000290573|HK2;;ENST00000447818.2_1_X:79827372-79827747:-|nuORF 5.127947807312012 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9926 53.914 288.0 503420.0 25 0 101060.0 + 17266 KLPEKWESV 9 133 558.3084076216184 1114.6022623100366 2 558.3083984255791 MULTI CID FTMS 0 0 0 9908 208735.8125 0.101659388800477 -4 0.3521385192871094 18 Unmodified _KLPEKWESV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 45.739877483867886 0.0497104363764649 4 K{I|L}V{M(Oxidation (M))|F}SPYYV 9 6 + 60.148 0.0 0.0 5.3963 5.3963 70.064 0.0 0.0 0.0 33.7862107415792 1.9627248839266545 1.9627248839266545 0.3954539343745722 0 0.5 0.9208187539523752 0.8807196863200843 0.0 K{I|L}V{M(Oxidation (M))|F}SPYYV;K{I|L}PEK[WE]SV;K{I|L}V{M(Oxidation (M))|F}SPYVY;K{I|L}V{M(Oxidation (M))|F}SV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y;K{I|L}V{[SA]|[TG]}P[WE]SV;K{I|L}V{M(Oxidation (M))|F}SYYPV;K{I|L}PE[PG]{[NV]|[RG]}YV;K{I|L}PE[PG]{[NV]|[RG]}VY;K{I|L}V{M(Oxidation (M))|F}SP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PA];K{I|L}V{M(Oxidation (M))|F}C(Carbamidomethyl (C))[RP]PV 5.3963;5.3609;5.1673;4.7124;4.2417;4.2222;3.6691;3.4401;3.286;3.2729 -;+;-;-;-;-;-;-;-;- + 1833 + 1 1.663 113144.3 1.0 5296 4628 9908 HBL1_DMSO_200M_050219_2,9926 HBL1_DMSO_200M_050219_2,9926,KLPEKWESV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9927 53.928 800.0 119100.0 25 0 5671.1 + 30100 QVHGTITGVDV 11 161 563.2984924441644 1124.5824319551286 2 563.2986328005791 MULTI CID FTMS 0 0 0 9908 186987.28125 0.1924718508463 3 -0.2031822204589843 19 Unmodified _QVHGTITGVDV_ ENSG00000167088|ENST00000300413|SNRPD1 75.5705956163825 0.0162609445057862 4 [VS]A[HQ]{I|L}TGVDV 11 4 + 77.488 0.0 0.0 6.8904 6.8904 83.326 0.0 0.0 0.0 4.36202283646351 16.575773191777927 4.36202283646351 4.36202283646351 0 1.0994850021680094 1.0 2.693672679568534 0.3807196863200844 [VS]A[HQ]{I|L}TGVDV;[VG]T[HQ]{I|L}TGVDV;{[TV]|[{I|L}S]}A[HN]{I|L}TGVDV;{[TV]|[{I|L}S]}G[HQ]{I|L}TGVDV;[VG]AH{[SA]|[TG]}{I|L}TGVDV;[TA]V[HN]{I|L}TGVDV;{[QV]|[N{I|L}]|[RA]|[KV]}H{[SA]|[TG]}{I|L}TGVDV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ]{I|L}TGVDV;{[SA]|[TG]}{I|L}[HN]{I|L}TGVDV;[VP]YY{I|L}TGVDV 6.8904;6.5025;6.3241;5.8998;5.8259;5.7025;5.6051;5.5828;5.4756;5.0714 -;-;-;-;-;-;+;-;-;- + 1697 1 1.663 76324.0 0.8399999737739563 5297 4628 9908 HBL1_DMSO_200M_050219_2,9927 HBL1_DMSO_200M_050219_2,9927,QVHGTITGVDV True True QVHGTITGVDV 53.927807 563.298632800579 8009643.5 9908.0 ENSG00000167088|ENST00000300413|SNRPD1 5.711767673492432 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9928 53.942 800.0 202710.0 25 0 8836.5 -1 0 137 918.419584038686 1834.824615144172 2 918.4242431521416 MULTI CID FTMS 0 0 0 9908 167333.890625 0.1875204428586817 7 -0.4273872375488281 20 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQS[KT]GTN{[QS]|[NT]} 17 -1 + 67.825 0.0 0.0 3.6965 3.6965 67.418 0.0 0.0 0.0 2.344895337806236 2.344895337806236 2.344895337806236 2.344895337806236 0 1.492992819099939 0.0 0.6109243748081782 0.958170666312956 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQS[KT]GTN{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQS[KT]GVD{[ES]|[DT]|[{I|L}C]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NANES[KT]GTN{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQS[KT]GVE{[DS]|[MA]|[CV]|TT};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVG[KT]SENAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DR[KT]SQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQS[KT]VGD{[ES]|[DT]|[{I|L}C]};[Q{I|L}]{M(Oxidation (M))|F}YRNQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NWQS[KT]GTN{[QS]|[NT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NADQS[KT]GTN{[QS]|[NT]} 3.6965;3.5688;3.5325;3.4363;3.4047;3.3662;3.3519;3.336;3.33;3.3281 -;-;-;-;-;-;-;-;-;- 60690 + 1 1.663 107705.4 0.7699999809265137 5298 4628 9908 HBL1_DMSO_200M_050219_2,9928 HBL1_DMSO_200M_050219_2,9928, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9930 53.946 13.0 3509900.0 25 0 532260.0 + 36179 SVVPDVRSV 9 50 479.271890235565 956.52922753793 2 479.2721435427666 MULTI CID FTMS 0 0 0 9929 3383635.5 0.3078444373823453 3 -0.177154541015625 1 Unmodified _SVVPDVRSV_ chr17:40628975-40630714|48|35.9|0.3|6.91|-|ENST00000644527|SMARCE1,SMARCE1;ENSG00000073584|ENST00000348513|SMARCE1;ENST00000469334.5_1_17:38788437-38802054:-|nuORF;nc|ENSG00000073584|Q969G3-2|SMARCE1;nc|ENSG00000073584|Q969G3-3|SMARCE1;nc|ENSG00000073584|Q969G3-4|SMARCE1;nc|ENSG00000073584|Q969G3-5|SMARCE1;nc|ENSG00000073584|Q969G3-6|SMARCE1 18.373094154950223 0.3393451798331396 4 [VS]VPDV 6 3 55.406 0.0 0.0 5.7924 0.0 0.0 0.0 357.19025598697505 357.19025598697505 48.4163750790475 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + [VS]VPDV 5.7924 + + 19 + 1 1.664 43340.2 1.0 5299 4629 9929 HBL1_DMSO_200M_050219_2,9930 HBL1_DMSO_200M_050219_2,9930,SVVPDVRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9931 53.947 8.4 6729000.0 25 0 1306800.0 + 41834 VPYEPPQV 8 71 464.74269551758135 927.4708381019628 2 464.7428161501884 MULTI CID FTMS 0 0 0 9929 6346216.0 0.8651963963737971 -1 0.0858535766601562 2 Unmodified _VPYEPPQV_ ENSG00000073282|ENST00000264731|TP63;ENSG00000078900|ENST00000378295|TP73;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;ENST00000603364.5_1_1:3607439-3646013:+|nuORF;nc|ENSG00000073282|Q9H3D4-10|TP63;nc|ENSG00000073282|Q9H3D4-11|TP63;nc|ENSG00000073282|Q9H3D4-12|TP63;nc|ENSG00000073282|Q9H3D4-2|TP63;nc|ENSG00000073282|Q9H3D4-3|TP63;nc|ENSG00000073282|Q9H3D4-4|TP63;nc|ENSG00000073282|Q9H3D4-5|TP63;nc|ENSG00000073282|Q9H3D4-6|TP63;nc|ENSG00000073282|Q9H3D4-7|TP63;nc|ENSG00000073282|Q9H3D4-8|TP63;nc|ENSG00000073282|Q9H3D4-9|TP63;nc|ENSG00000078900|O15350-10|TP73;nc|ENSG00000078900|O15350-11|TP73;nc|ENSG00000078900|O15350-12|TP73;nc|ENSG00000078900|O15350-13|TP73;nc|ENSG00000078900|O15350-2|TP73;nc|ENSG00000078900|O15350-3|TP73;nc|ENSG00000078900|O15350-4|TP73;nc|ENSG00000078900|O15350-5|TP73;nc|ENSG00000078900|O15350-6|TP73;nc|ENSG00000078900|O15350-8|TP73;nc|ENSG00000078900|O15350-9|TP73;TBL1XR1-TP73|1|fusion;TBL1XR1-TP73|2|fusion;TBL1XR1-TP73|3|fusion;TBL1XR1-TP73|4|fusion;TBL1XR1-TP73|5|fusion;TBL1XR1-TP73|6|fusion 49.66892048692302 0.1408045912742846 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVPPQV 8 2 + 56.464 0.0 0.0 6.0879 6.0879 81.414 0.0 0.0 0.0 5.2827377716704405 9.731975075880328 5.2827377716704405 5.2827377716704405 0 0.5796896906561032 1.0969100130080565 0.7302046884880937 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVPPQV;[VP]EYPPQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VEPPQV;[VP]YEPPQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EPVPQV;{NN|[MP]|[D{I|L}]|[EV]}PYPPQV;[EP]YVPPQV;[EP]VYPPQV;[EP]YPVPQV;[VP]P[YE]PQV 6.0879;5.5183;5.4388;5.1938;5.0235;4.3343;4.1516;3.827;3.0872;2.7568 -;-;-;+;-;-;-;-;-;- + 280 1 1.664 52958.9 1.0 5300 4629 9929 HBL1_DMSO_200M_050219_2,9931 HBL1_DMSO_200M_050219_2,9931,VPYEPPQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9932 53.948 23.0 3084300.0 25 0 583500.0 + 3155 AVSDGVIKV 9 77 444.2635445602461 886.5125361872922 2 444.2637512087822 MULTI CID FTMS 0 0 0 9929 2371137.25 0.838014998398551 -2 0.1831855773925781 3 Unmodified _AVSDGVIKV_ ENSG00000172757|ENST00000308162|CFL1;ENST00000530945.1_1_11:65623404-65625570:-|nuORF 29.081581746732265 0.1611639662936252 4 {[VA]|[{I|L}G]}SDVG{I|L}KV 9 2 + 59.1 0.0 0.0 6.6666 6.6666 93.034 0.0 0.0 0.0 44.13444813378733 4.177901288460475 4.177901288460475 37.759621790487685 0 1.0044321917401078 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}SDVG{I|L}KV;WWR{I|L}KV 6.6666;2.4073 -;- 110 + 1 1.664 59133.7 1.0 5301 4629 9929 HBL1_DMSO_200M_050219_2,9932 HBL1_DMSO_200M_050219_2,9932,AVSDGVIKV False True AVSDGVIKV 53.948417 444.263751208782 19068268.0 9929.0 ENSG00000172757|ENST00000308162|CFL1;;ENST00000530945.1_1_11:65623404-65625570:-|nuORF 4.111820737520854 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9933 53.95 25.0 2255200.0 25 0 315240.0 + 44911 YPPPEVRNI 9 66 542.7934218667502 1083.5722908003004 2 542.7935058474541 MULTI CID FTMS 0 0 0 9929 2011639.0 0.1085989410242955 17 -1.4677047729492188 4 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 15.738622578938676 0.4106572216562794 4 YPPPE 5 4 62.206 0.0 0.0 5.7408 0.0 0.0 0.0 497.28481370491386 497.28481370491386 55.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YPPPE 5.7408 + + 28 + 1 1.664 56415.3 1.0 5302 4629 9929 HBL1_DMSO_200M_050219_2,9933 HBL1_DMSO_200M_050219_2,9933,YPPPEVRNI False True YPPPEVRNI 53.949594 542.793505847454 2695848320.0 9929.0 ENSG00000099995|ENST00000215793|SF3A1;;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;;nc|ENSG00000099995|Q15459-2|SF3A1;;ENST00000496189.1_1_22:30748938-30752805:-|nuORF 6.701218763987224 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9934 53.951 24.0 2635700.0 25 0 337560.0 + 28606 PVDKPGPSI 9 93 455.2555885603596 908.4966241875192 2 455.2559387087822 MULTI CID FTMS 0 0 0 9929 1616767.0 0.0878456193655513 -7 0.6172332763671875 5 Unmodified _PVDKPGPSI_ REV__ENSG00000076356|ENST00000367033|PLXNA2 64.23631603340823 0.0237365939569086 4 [{I|L}T]T 3 -1 28.548 0.0 0.0 3.1423 0.0 0.0 0.0 590.2930366181685 590.2930366181685 13.063317301734669 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.6139829889124311 0.0 [{I|L}T]T 3.1423 - 289 1 1.664 57549.5 1.0 5303 4629 9929 HBL1_DMSO_200M_050219_2,9934 HBL1_DMSO_200M_050219_2,9934,PVDKPGPSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9935 53.953 87.0 570660.0 25 0 103370.0 -1 LPCLAYDD 8 61 483.7163028496827 965.4180527661654 2 483.7164184451103 MULTI CID FTMS 0 0 0 9929 730801.375 1.0 0 0.0 6 Carbamidomethyl (C) _LPC(Carbamidomethyl (C))LAYDD_ ENSG00000103043|ENST00000261776|VAC14 6.354104778181461 0.7857632046190106 4 PP 2 -1 9.464 0.0 0.0 0.9803 0.0 0.0 210.9920406585466 557.2935274713499 768.2855681298965 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.9803 - 32 + 1 1.664 44636.4 1.0 5304 4629 9929 HBL1_DMSO_200M_050219_2,9935 HBL1_DMSO_200M_050219_2,9935,LPCLAYDD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9936 53.954 64.0 987640.0 25 0 82102.0 + 41481 VPLSQVKSI 9 80 485.8003623638161 969.5861717944324 2 485.8006774783134 MULTI CID FTMS 0 0 0 9929 708454.25 0.3933564550436995 -3 0.2729988098144531 7 Unmodified _VPLSQVKSI_ ENSG00000177485|ENST00000557385|ZBTB33 61.60191391372663 0.0251951588191061 4 VP{I|L}{[QS]|[NT]}VKTV 9 2 + 75.436 0.0 0.0 7.7802 7.7802 78.581 0.0 0.0 0.0 27.72874163570227 0.4907888712312029 0.4907888712312029 0.4907888712312029 0 2.0356668758921828 1.3010299956639813 1.024227503252014 0.0 VP{I|L}{[QS]|[NT]}VKTV;VP{I|L}{[QS]|[NT]}VKS{I|L};[{I|L}P]SQVKS{I|L}V;[VP]TQVKS{I|L}V;[{I|L}P]S[AG]VKS{I|L}V;[{I|L}P]SQVVKTV;[VP]T[AG]VKS{I|L}V;[{I|L}P]V{[QS]|[NT]}KS{I|L}V;[VP]TQVVKTV;[VP]{I|L}{[QS]|[NT]}KS{I|L}V 7.7802;7.7296;6.4646;6.4106;5.5149;5.5035;5.4609;5.4569;5.4495;5.4028 -;+;-;-;-;-;-;-;-;- + 920 + 1 1.664 55322.9 1.0 5305 4629 9929 HBL1_DMSO_200M_050219_2,9936 HBL1_DMSO_200M_050219_2,9936,VPLSQVKSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9937 53.956 90.0 825220.0 25 0 112500.0 + 40424 VIIDDHPEV 9 87 518.7688609756847 1035.5231690181693 2 518.7693969607353 MULTI CID FTMS 0 0 0 9929 603192.125 0.8832848389177569 -1 0.0858535766601562 8 Unmodified _VIIDDHPEV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 32.30548876998284 0.1201446275138228 4 V{I|L}{I|L}DDH 6 3 64.686 0.0 0.0 6.2467 0.0 0.0 0.0 340.1514698883412 340.1514698883412 37.6856908032363 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + V{I|L}{I|L}DDH 6.2467 + + 149 + 1 1.664 64984.9 1.0 5306 4629 9929 HBL1_DMSO_200M_050219_2,9937 HBL1_DMSO_200M_050219_2,9937,VIIDDHPEV True True VIIDDHPEV 53.956259 518.769396960735 5058092.5 9929.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 7.376064777374268 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9938 53.961 262.0 560380.0 25 0 92586.0 + 41423 VPLFNIAKV 9 127 500.81130176593626 999.6080505986724 2 500.8109619021416 MULTI CID FTMS 0 0 0 9929 396298.46875 0.1258837587008987 -4 0.3568534851074219 9 Unmodified _VPLFNIAKV_ REV__ENSG00000204681|ENST00000377034|GABBR1;REV__nc|ENSG00000204681|Q9UBS5-3|GABBR1;REV__nc|ENSG00000204681|Q9UBS5-4|GABBR1;REV__nc|ENSG00000204681|Q9UBS5-5|GABBR1 43.85829265575387 0.0542763391141878 4 [TA][R{I|L}]E{I|L}AKV 9 -1 + 53.685 0.0 0.0 5.3706 5.3706 81.593 0.0 0.0 0.0 1.535310452627641 40.58632530216519 1.535310452627641 8.684306844926866 0 1.4013870797934458 0.958607314841775 0.0 0.3252574989159953 [TA][R{I|L}]E{I|L}AKV;{[QG]|[NA]}KKE{I|L}AKV;[AG]GKKE{I|L}AKV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HK][RV]KV;[Q{I|L}]{[TV]|[{I|L}S]}T{I|L}ARV;AAV{[TV]|[{I|L}S]}T{I|L}ARV;[TA][R{I|L}]T{I|L}A[VG]V;{[VA]|[{I|L}G]}A{[TV]|[{I|L}S]}T{I|L}ARV;[AG]{I|L}{[TV]|[{I|L}S]}T{I|L}ARV;{[QS]|[NT]}{I|L}{I|L}T{I|L}ARV 5.3706;4.5019;4.2799;1.7566;1.3043;1.2171;1.2171;1.1581;1.0824;1.0217 -;-;-;-;-;-;-;-;-;- 718 1 1.664 115256.4 1.0 5307 4629 9929 HBL1_DMSO_200M_050219_2,9938 HBL1_DMSO_200M_050219_2,9938,VPLFNIAKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9939 53.966 278.0 473410.0 25 0 45557.0 + -1 YFYGGLMTTQF 11 96 672.3042163728708 1342.5938798125414 2 672.3050414919853 MULTI CID FTMS 0 0 0 9929 321837.375 0.5942437704432215 -6 0.5627403259277344 10 Oxidation (M) _YFYGGLM(Oxidation (M))TTQF_ REV__ENSG00000156006|ENST00000286479|NAT2 26.268140514670165 0.4754186812857754 4 Y{M(Oxidation (M))|F}PD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RH]Q{M(Oxidation (M))|F} 10 -1 + 42.189 0.0 0.0 3.1424 3.1424 71.745 0.0 0.0 0.0 22.68114684785509 5.6246936830415 5.6246936830415 6.303337684950058 0 0.7614393726401688 0.0 0.0 0.7742275032520141 Y{M(Oxidation (M))|F}PD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RH]Q{M(Oxidation (M))|F};Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}[YK][WD]Q{M(Oxidation (M))|F};[DP]RENQ[Y{M(Oxidation (M))|F}]Q{M(Oxidation (M))|F};[DP]REN[Y{M(Oxidation (M))|F}]QQ{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}]{I|L}Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DNQ{M(Oxidation (M))|F};[RH]ND{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RH]Q{M(Oxidation (M))|F};[DP]REGGQ[Y{M(Oxidation (M))|F}]Q{M(Oxidation (M))|F};[DP]REN[AG][Y{M(Oxidation (M))|F}]Q{M(Oxidation (M))|F};[RH]QAQQ[WD]Q{M(Oxidation (M))|F};[DP]RV{[CT]|[{M(Oxidation (M))|F}G]}[YT]NQ{M(Oxidation (M))|F} 3.1424;2.6729;1.256;1.0317;0.95626;0.73113;0.57335;0.57335;0.50691;0.42094 -;-;-;-;-;-;-;-;-;- 649 + 1 1.664 99327.2 1.0 5308 4629 9929 HBL1_DMSO_200M_050219_2,9939 HBL1_DMSO_200M_050219_2,9939,YFYGGLMTTQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9940 53.973 352.0 579880.0 25 0 71315.0 + 1157 AGYCQRGG 8 150 406.1791810480371 0 406.1790344119072 PEAK CID FTMS 0 0 0 9929 308111.40625 1.0 0 0.0 11 Unmodified _AGYCQRGG_ REV__ENST00000587217.5_1_19:3015738-3020566:-|nuORF;REV__ENST00000589291.1_1_19:3015738-3019979:-|nuORF;REV__ENST00000590183.5_1_19:3015738-3025571:-|nuORF 13.50788311687929 0.5021269579892848 4 PVE 3 -1 15.49 0.0 0.0 1.9115 0.0 0.0 225.0635708350258 257.0933503888424 482.1569212238682 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 PVE 1.9115 - 220 + 1 1.664 159700.2 1.0 5309 4629 9929 HBL1_DMSO_200M_050219_2,9940 HBL1_DMSO_200M_050219_2,9940,AGYCQRGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9941 53.978 312.0 338730.0 25 0 26424.0 + 18488 KYMQKSLEL 9 132 570.3100934867213 1138.6056340402424 2 570.3106567263603 MULTI CID FTMS 0 0 0 9929 226446.9375 0.6798916947456677 -1 0.0858535766601562 12 Unmodified _KYMQKSLEL_ ENSG00000163728|ENST00000296015|TTC14;nc|ENSG00000163728|Q96N46-2|TTC14 47.594388314883695 0.0456443387682827 4 [YK]MQK{[TV]|[{I|L}S]}E{I|L} 9 0 + 34.125 0.0 0.0 2.9971 2.9971 64.477 0.0 0.0 0.0 4.417177698691578 8.615882591764969 4.417177698691578 1.7609125905568137 0 0.9247425010840048 0.0 0.0 0.8556270500406937 + + [YK]MQK{[TV]|[{I|L}S]}E{I|L};[YK]MQK[NS]K{I|L};[YK]MQ{[TV]|[{I|L}S]}KE{I|L};[YK]MQ{[TV]|[{I|L}S]}EK{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}T]MYKE{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}T]MYEK{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}T]MEYK{I|L};[YK]M[AG]K{[TV]|[{I|L}S]}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[HG]|PP}QK{[TV]|[{I|L}S]}E{I|L};{[HG]|PP}PMQK{[TV]|[{I|L}S]}E{I|L} 2.9971;2.8424;2.7327;2.578;2.4323;2.2776;2.2776;2.1884;2.1691;2.1583 +;-;-;-;-;-;-;-;-;- + 1441 1 1.664 83163.0 1.0 5310 4629 9929 HBL1_DMSO_200M_050219_2,9941 HBL1_DMSO_200M_050219_2,9941,KYMQKSLEL True True KYMQKSLEL 53.978273 570.31065672636 2497323.5 9929.0 nc|ENSG00000163728|Q96N46-2|TTC14;;ENSG00000163728|ENST00000296015|TTC14 3.40128855407238 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9943 53.983 45.0 1247800.0 25 0 106920.0 + 22085 LPPPTPSQI 9 96 475.27156135390464 948.5285697746092 2 475.2717162966728 MULTI CID FTMS 0 0 0 9942 1390558.25 0.8703706673900152 -3 0.2197685241699218 1 Unmodified _LPPPTPSQI_ ENSG00000083223|ENST00000375963|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 54.773552608820026 0.0299037012502309 4 {[HG]|PP}TP{I|L}[PS]Q{I|L} 9 3 + 34.948 0.0 0.0 3.6844 3.6844 72.278 0.0 0.0 0.0 2.3764301679958777 7.232267369942122 2.3764301679958777 5.54519757179667 0 0.9124379954164592 0.0 1.524227503252014 0.0 {[HG]|PP}TP{I|L}[PS]Q{I|L};[{I|L}P][YT][KS]Q{I|L};{[HG]|PP}TPS[{I|L}P]Q{I|L};[{I|L}P][YT][KS]{I|L}Q;[VP]DPA[{I|L}P]Q{I|L};{[QN]|[E{I|L}]|[KN]}SA[R{M(Oxidation (M))|F}]{[QV]|[N{I|L}]|[RA]|[KV]} 3.6844;3.0998;2.425;2.0232;0.92436;0.83676 -;-;-;-;-;- 437 1 1.664 48708.1 1.0 5311 4630 9942 HBL1_DMSO_200M_050219_2,9943 HBL1_DMSO_200M_050219_2,9943,LPPPTPSQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9944 53.984 58.0 930380.0 25 0 131330.0 -1 0 100 316.18118241494136 630.3478118966827 2 316.1807433962822 MULTI CID FTMS 0 0 0 9942 950301.5625 0.4767284544790415 2 -0.1405715942382812 2 4 H 1 -1 2.7642 0.0 0.0 0.43852 0.0 0.0 350.2166301113296 140.04815088443596 490.2647809957656 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.43852 - 5 + 1 1.664 51164.8 1.0 5312 4630 9942 HBL1_DMSO_200M_050219_2,9944 HBL1_DMSO_200M_050219_2,9944, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9945 53.985 55.0 1119100.0 25 0 236510.0 + 15411 IPPDQQRLI 9 64 540.3146414642733 1078.6147299953466 2 540.3145629763603 MULTI CID FTMS 0 0 0 9942 1088976.25 0.044033509301382 21 -1.8528251647949217 3 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 13.042465956692816 0.4836390050082244 4 {I|L}PPD 4 5 53.175 0.0 0.0 4.93 0.0 0.0 0.0 653.375540761199 653.375540761199 45.72805036539442 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPD 4.93 + + 25 + 1 1.664 56547.1 1.0 5313 4630 9942 HBL1_DMSO_200M_050219_2,9945 HBL1_DMSO_200M_050219_2,9945,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9946 53.988 116.0 625420.0 25 0 143820.0 + 23973 LVSSYLNVTY 10 65 579.8065138407006 1157.5984747482012 2 579.8069946169853 MULTI CID FTMS 0 0 0 9942 491821.3125 0.2568369160173673 4 -0.2575111389160156 4 Unmodified _LVSSYLNVTY_ REV__ENSG00000121966|ENST00000241393|CXCR4;REV__nc|ENSG00000121966|P61073-2|CXCR4 10.823927491677226 0.6659270209832991 4 RYV 3 -1 26.287 0.0 0.0 2.2708 0.0 0.0 0.0 736.3417452447874 736.3417452447874 4.6040937697618745 0.0 0.0 0.0 0 0.6109243748081782 0.0 0.0 0.0 RYV 2.2708 - 64 + 1 1.664 62912.9 1.0 5314 4630 9942 HBL1_DMSO_200M_050219_2,9946 HBL1_DMSO_200M_050219_2,9946,LVSSYLNVTY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9947 53.99 122.0 378750.0 25 0 29333.0 43525 WWWWIWWQWW 10 55 874.9041028402406 1747.7936527472812 2 874.9109985232353 MULTI CID FTMS 0 0 0 9942 477061.46875 0.1754251212810046 -10 0.8522186279296875 5 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 15 13 + 72.915 0.0 0.0 4.1718 4.1718 75.26 0.0 0.0 0.0 55.16765926813832 11.126590506049324 11.126590506049324 6.690067809585756 0 0.4247425010840047 0.0 0.0 1.5356668758921828 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NWQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 4.1718;3.7891;3.6558 -;-;- 285 + 1 1.664 38493.4 1.0 5315 4630 9942 HBL1_DMSO_200M_050219_2,9947 HBL1_DMSO_200M_050219_2,9947,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 9948 53.992 89.0 464660.0 25 0 25196.0 + 13959 HYQAIVTAY 9 84 533.2719814109029 1064.5294098886056 2 533.2707397341728 MULTI CID FTMS 0 0 0 9942 328941.875 0.2926237229226577 3 -0.1974945068359375 6 Unmodified _HYQAIVTAY_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 23.1484247019978 0.2366544122328345 4 {[WN]|[YH]}[QA]{I|L}VTAY 9 0 {[WN]|[YH]}[QA]{I|L}VT + + 19.464 26.559 3.2692 1.8284 1.8284 44.473 0.0 0.0 0.0 0.0 -0.3959944250781468 -0.3959944250781468 0.0 0 0.0 0.0 0.0 0.0 + + {[WN]|[YH]}[QA]{I|L}VTAY 1.8284 + + 70 + 1 1.664 37700.5 1.0 5316 4630 9942 HBL1_DMSO_200M_050219_2,9948 HBL1_DMSO_200M_050219_2,9948,HYQAIVTAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9949 53.997 222.0 391740.0 25 0 49009.0 + 22040 LPPPPPPAM 9 100 458.751710776598 915.488868619996 2 458.7519714236259 MULTI CID FTMS 0 0 0 9942 304618.8125 0.0688734532974803 50 -4.426624298095703 7 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 4 [{I|L}P]PPPP 6 3 45.155 0.0 0.0 4.9324 0.0 0.0 0.0 314.1160723476069 314.1160723476069 29.67084689121528 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.0 0.0 + [{I|L}P]PPPP 4.9324 + + 144 1 1.664 72673.4 1.0 5317 4630 9942 HBL1_DMSO_200M_050219_2,9949 HBL1_DMSO_200M_050219_2,9949,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9950 54.0 192.0 680320.0 25 0 67838.0 + 3420 AYYAGHVL 8 115 447.2293110220469 892.4440691108939 2 447.2292663455009 MULTI CID FTMS 0 0 0 9942 283616.78125 0.90073710537024 1 -0.0807456970214843 8 Unmodified _AYYAGHVL_ ENSG00000127054|ENST00000435064|INTS11;ENST00000421495.6_1_1:1249445-1259984:-|nuORF;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;ENST00000526113.1_1_1:1250782-1259984:-|nuORF;ENST00000526904.5_1_1:1250884-1259984:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 17.086550045450526 0.6584923310065985 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y 3 5 33.2 0.0 0.0 3.7201 0.0 0.0 0.0 492.2583101861938 492.2583101861938 17.001962355242952 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y 3.7201 + + 195 + 1 1.664 102176.4 1.0 5318 4630 9942 HBL1_DMSO_200M_050219_2,9950 HBL1_DMSO_200M_050219_2,9950,AYYAGHVL False True AYYAGHVL 54.000311 447.229266345501 2164849.0 9942.0 nc|ENSG00000127054|Q5TA45-4|INTS11;;ENST00000488042.6_1_1:1250056-1259988:-|nuORF;;ENSG00000127054|ENST00000435064|INTS11;;nc|ENSG00000127054|Q5TA45-2|INTS11;;ENST00000421495.6_1_1:1249445-1259984:-|nuORF;;nc|ENSG00000127054|Q5TA45-5|INTS11;;ENST00000526113.1_1_1:1250782-1259984:-|nuORF;;ENST00000526904.5_1_1:1250884-1259984:-|nuORF 4.626232862472534 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9951 54.014 779.0 362800.0 25 0 26110.0 + 13688 HQIEAVDGEEL 11 135 620.2961617544174 1238.5777705756348 2 620.2964355349541 MULTI CID FTMS 0 0 0 9942 234025.59375 0.0190560357789243 -4 0.3095817565917969 9 Unmodified _HQIEAVDGEEL_ ENSG00000105404|ENST00000222008|RABAC1;ENST00000595226.1_1_19:42461000-42461518:-|nuORF 107.5634045930896 0.009905022604853 4 {[QN]|[E{I|L}]|[KN]}QHAVDGEE{I|L} 11 3 + 109.47 0.0 0.0 8.8385 8.8385 84.618 0.0 0.0 0.0 2.898277607314455 16.575773191777927 2.898277607314455 2.898277607314455 0 0.9802046884880936 0.5086383061657274 2.8807196863200843 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}QHAVDGEE{I|L};[HQ]{I|L}EAVDGEE{I|L};{[QN]|[E{I|L}]|[KN]}QAHVDGEE{I|L};{[QN]|[E{I|L}]|[KN]}QHG{I|L}DGEE{I|L};{[QN]|[E{I|L}]|[KN]}[AG]HAVDGEE{I|L};[HQ]{I|L}EG{I|L}DGEE{I|L};{[DA]|[EG]}[{I|L}A]HAVDGEE{I|L};{[QN]|[E{I|L}]|[KN]}[AG]AHVDGEE{I|L};{[QN]|[E{I|L}]|[KN]}[AG]HG{I|L}DGEE{I|L};{[QN]|[E{I|L}]|[KN]}QHGD{I|L}GEE{I|L} 8.8385;8.6045;8.4558;8.3329;8.1015;8.0989;7.8081;7.7188;7.5959;7.3376 -;+;-;-;-;-;-;-;-;- + 12850 1 1.664 210654.5 1.0 5319 4630 9942 HBL1_DMSO_200M_050219_2,9951 HBL1_DMSO_200M_050219_2,9951,HQIEAVDGEEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9952 54.018 200.0 278450.0 25 0 25896.0 + 21963 LPPMDHSTI 9 98 505.7526348088312 1009.4907166844624 2 505.7533447146416 MULTI CID FTMS 0 0 0 9942 238077.046875 0.2393494434758578 20 -1.730022430419922 10 Unmodified _LPPMDHSTI_ ENSG00000064666|ENST00000263097|CNN2;nc|ENSG00000064666|Q99439-2|CNN2 39.957323273325 0.0756908302845263 4 {I|L}P{NN|[MP]|[D{I|L}]|[EV]}D[HS]T{I|L} 9 0 + 48.436 0.0 0.0 4.7981 4.7981 75.205 0.0 0.0 0.0 29.139532579872107 0.0643107925515948 0.0643107925515948 4.673400813558232 0 0.6747425010840047 2.0 0.8921590589602533 0.0 + + {I|L}P{NN|[MP]|[D{I|L}]|[EV]}D[HS]T{I|L};{I|L}P{NN|[MP]|[D{I|L}]|[EV]}D[RN][PA] 4.7981;4.3352 +;- + 178 + 1 1.664 47929.0 1.0 5320 4630 9942 HBL1_DMSO_200M_050219_2,9952 HBL1_DMSO_200M_050219_2,9952,LPPMDHSTI True True LPPMDHSTI 54.017617 505.753344714642 36111777.0 9942.0 ENSG00000064666|ENST00000263097|CNN2;;nc|ENSG00000064666|Q99439-2|CNN2 5.727324962615967 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9953 54.031 800.0 287160.0 25 0 22232.0 + 43080 VYLPTREY 8 207 520.7735736243172 1039.5325943154344 2 520.7736694216728 MULTI CID FTMS 0 0 0 9942 153567.109375 0.5222169324342347 2 -0.1405715942382812 11 Unmodified _VYLPTREY_ ENSG00000130311|ENST00000359866|DDA1;ENST00000557196.1_1_14:45356671-45356932:-|nuORF 36.12702656103203 0.299085846329477 4 VY{I|L}YWPTV 8 5 + 65.231 0.0 0.0 6.275 6.275 77.222 0.0 0.0 0.0 31.278611764967053 2.218487496163569 2.218487496163569 2.218487496163569 0 0.8019020776254365 2.0 0.6100233437409719 0.0 VY{I|L}YWPTV;VY{I|L}YWPS{I|L};VY{I|L}YWSP{I|L};VY{I|L}YWTPV;VY{I|L}PT[WY]V;VY{I|L}PT{[RE]|[WV]}Y;VY{I|L}YWS{I|L}P;VY{I|L}P[HD]PTV;VY{I|L}P[WY]TV;VY{I|L}PT[{M(Oxidation (M))|F}T]TV 6.275;6.0616;5.923;5.7824;5.7398;5.536;5.4549;5.3873;5.3433;5.2941 -;-;-;-;-;+;-;-;-;- + 1048 + 1 1.664 172349.3 0.8100000023841858 5321 4630 9942 HBL1_DMSO_200M_050219_2,9953 HBL1_DMSO_200M_050219_2,9953,VYLPTREY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9954 54.045 800.0 195490.0 25 0 20420.0 18474 KYITGDNLVK 10 211 384.22065174460346 1149.6401258340104 3 384.2209045290947 MULTI CID FTMS 0 0 0 9942 116541.7421875 0.1206134876883118 4 -0.2575111389160156 12 Unmodified _KYITGDNLVK_ nc|ENSG00000211777|A0A0B4J244|TRAV3 6.623454094837244 0.6959991410060766 4 {I|L}{M(Oxidation (M))|F}EH[H{I|L}]K{I|L} 8 8 18.859 0.0 0.0 1.6404 0.0 0.0 114.0692175217401 0.0 114.0692175217401 0.0 0.4518875610440815 0.0 0.0 0 0.2396518287104437 0.0 0.4247425010840047 0.1171302707394362 {I|L}{M(Oxidation (M))|F}EH[H{I|L}]K{I|L} 1.6404 - 415 + 1 1.664 124951.7 0.5600000023841858 5322 4630 9942 HBL1_DMSO_200M_050219_2,9954 HBL1_DMSO_200M_050219_2,9954,KYITGDNLVK False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9955 54.059 800.0 314660.0 25 0 19345.0 + + 37317 KTLTGKTITL 10 281 359.2291732449321 1074.6656903349965 3 359.2289916872978 MULTI CID FTMS 0 0 0 9942 108147.0390625 1.0 0 0.0 13 Unmodified _TITKGTLTKL_ ENSG00000143947|ENST00000272317|RPS27A;ENST00000598814.1_1_19:18682694-18684218:+|nuORF;ENST00000463185.1_1_2:55459960-55460026:+|nuORF;ENST00000471772.6_1_2:55459960-55460558:+|nuORF;ENST00000445497.1_1_2:149621139-149621370:-|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENSG00000170315|ENST00000302182|UBB;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENSG00000150991|ENST00000339647|UBC;ENST00000453803.2_1_20:35677668-35677815:+|nuORF 23.80106514851385 0.4339316747945569 4 [{I|L}T][KT]GKT 7 -1 22.883 0.0 0.0 2.1293 0.0 0.0 0.0 342.2011943156457 342.2011943156457 8.903879730611454 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.2416440611282624 0.0 [{I|L}T][KT]GKT 2.1293 - 728 1 1.664 202082.2 0.5099999904632568 5323 4630 9942 HBL1_DMSO_200M_050219_2,9955 HBL1_DMSO_200M_050219_2,9955,TITKGTLTKL False False KTLTGKTITL 54.059077 359.228991687298 844651.8125 9942.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000598814.1_1_19:18682694-18684218:+|nuORF;;ENST00000463185.1_1_2:55459960-55460026:+|nuORF;;ENST00000471772.6_1_2:55459960-55460558:+|nuORF;;ENST00000445497.1_1_2:149621139-149621370:-|nuORF;;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC;;ENST00000453803.2_1_20:35677668-35677815:+|nuORF 2.940984408060709 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9957 54.063 3.7 13325000.0 25 0 1341700.0 + 3271 AYHELAQVY 9 78 547.2694878370107 1092.5244227408214 2 547.2700073122978 MULTI CID FTMS 0 0 0 9956 16160169.0 1.0 0 0.0 1 Unmodified _AYHELAQVY_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 24.020572477871973 0.2255576514309169 4 [AG]{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}AGAVY 11 5 + 56.31 0.0 0.0 5.1541 5.1541 72.134 0.0 0.0 0.0 1.924818053354841 13.565473235138114 1.924818053354841 1.924818053354841 0 0.5 1.5228787452803376 0.0 0.3494850021680094 [AG]{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}AGAVY;[HA]YE{I|L}AGAVY;[HA]YE{I|L}AQVY;[HA]YE{I|L}QAVY;[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}AQVY;[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}QAVY;[AG]A[WD]{I|L}AGAVY;[AG]A[WD]{I|L}AQVY;[AG]A[WD]{I|L}QAVY;[QA][WD]{I|L}AGAVY 5.1541;4.978;4.8168;4.7;4.6691;4.5523;4.3975;4.2324;4.1155;4.0602 -;-;-;-;-;-;-;-;-;- 337 1 1.664 47557.8 1.0 5324 4631 9956 HBL1_DMSO_200M_050219_2,9957 HBL1_DMSO_200M_050219_2,9957,AYHELAQVY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9958 54.065 9.6 6548000.0 25 0 528930.0 + 5888 DPYKVYRI 8 57 527.2900540911855 1052.565555249171 2 527.2905761599541 MULTI CID FTMS 0 0 0 9956 6137958.5 1.0 0 0.0 2 Unmodified _DPYKVYRI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 34.10243960390752 0.3329570729325616 4 DPYKV 5 3 59.993 0.0 0.0 5.6997 0.0 0.0 0.0 447.2381418667281 447.2381418667281 17.78659694992122 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 0.0 0.0 + DPYKV 5.6997 + + 81 + 1 1.664 58661.9 1.0 5325 4631 9956 HBL1_DMSO_200M_050219_2,9958 HBL1_DMSO_200M_050219_2,9958,DPYKVYRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9959 54.066 31.0 2278100.0 25 0 237230.0 + 16771 KGAKAGII 8 79 379.2505089148608 756.4864648965216 2 379.2502624392509 MULTI CID FTMS 0 0 0 9956 2031976.125 0.5086150502263264 -2 0.1173286437988281 3 Unmodified _KGAKAGII_ REV__ENSG00000168916|ENST00000513986|ZNF608;REV__nc|ENSG00000168916|Q9ULD9-2|ZNF608 5.230669730166228 0.792582437072536 4 DK{I|L}R{I|L}{I|L} 6 -1 + 47.757 0.0 0.0 6.313 6.313 91.977 0.0 0.0 0.0 35.538588578747365 6.945422223379119 6.945422223379119 47.75707607491093 0 1.035666875892183 0.0 0.0 0.4247425010840047 DK{I|L}R{I|L}{I|L} 6.313 - 59 + 1 1.664 61216.5 1.0 5326 4631 9956 HBL1_DMSO_200M_050219_2,9959 HBL1_DMSO_200M_050219_2,9959,KGAKAGII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9960 54.067 40.0 871770.0 25 0 66710.0 15202 IPESGTEDNV 10 76 530.7435245140377 1059.4724960948754 2 530.7436401247978 MULTI CID FTMS 0 0 0 9956 927664.5 0.9411559111642958 -4 0.3005142211914062 4 Unmodified _IPESGTEDNV_ ENSG00000163520|ENST00000404922|FBLN2;nc|ENSG00000163520|P98095|FBLN2 19.256988751693697 0.5244284437930726 4 [{I|L}P]EP{I|L} 5 7 38.188 0.0 0.0 3.6044 0.0 0.0 0.0 507.1335428080192 507.1335428080192 15.969100130080562 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}P]EP{I|L} 3.6044 - 84 1 1.664 37682.6 1.0 5327 4631 9956 HBL1_DMSO_200M_050219_2,9960 HBL1_DMSO_200M_050219_2,9960,IPESGTEDNV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9961 54.07 146.0 697900.0 25 0 58999.0 + 22049 LPPPPPPHL 9 92 482.78449894353474 963.5544449538696 2 482.7844421267509 MULTI CID FTMS 0 0 0 9956 459372.4375 0.237974914778603 -9 0.7345619201660156 5 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 45.7499826716795 0.0496882803020414 4 {I|L}PPPPPPH{I|L} 9 0 + 78.691 0.0 0.0 8.1668 8.1668 95.403 0.0 0.0 0.0 68.77652097627757 8.738221912761503 8.738221912761503 17.44727494896693 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPPPPPH{I|L};{I|L}PPP[YK]H{I|L};{I|L}PP[YK]PH{I|L};{I|L}P[YK]PPH{I|L};{I|L}[YK]PPPH{I|L};{I|L}[YK][YK]H{I|L} 8.1668;6.3561;6.3561;5.8609;3.3444;1.5408 +;-;-;-;-;- + 161 + 1 1.664 79858.7 1.0 5328 4631 9956 HBL1_DMSO_200M_050219_2,9961 HBL1_DMSO_200M_050219_2,9961,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9962 54.072 75.0 705350.0 25 0 36645.0 + 21528 LPIQPAQHI 9 92 508.79866261972205 1015.582772306244 2 508.7990295290947 MULTI CID FTMS 0 0 0 9956 377708.875 0.3733458388565477 -3 0.2031822204589843 6 Unmodified _LPIQPAQHI_ ENSG00000116044|ENST00000397062|NFE2L2;ENST00000462023.1_1_2:178098693-178129304:-|nuORF;ENST00000477534.1_1_2:178098693-178128139:-|nuORF;nc|ENSG00000116044|Q16236-2|NFE2L2;nc|ENSG00000116044|Q16236-3|NFE2L2 64.23631603340823 0.0237365939569086 4 {I|L}P{I|L}QP[QA]H{I|L} 9 0 + 67.111 0.0 0.0 6.6081 6.6081 87.973 0.0 0.0 0.0 44.13016489275471 2.3764301679958777 2.3764301679958777 9.208187539523747 0 1.4604093769761874 2.0 0.0 0.4247425010840047 + + {I|L}P{I|L}QP[QA]H{I|L};{I|L}P{I|L}[AG]P[QA]H{I|L};{I|L}P{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]}[YR];{I|L}P{I|L}[AG]{[QV]|[N{I|L}]|[RA]|[KV]}[YR] 6.6081;5.7014;5.1081;4.1961 +;-;-;- + 264 + 1 1.664 50768.2 1.0 5329 4631 9956 HBL1_DMSO_200M_050219_2,9962 HBL1_DMSO_200M_050219_2,9962,LPIQPAQHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9963 54.076 251.0 304720.0 25 0 43840.0 -1 YVCVWCFC 8 101 568.7230181809031 1135.431483428606 2 568.7239868044853 MULTI CID FTMS 0 0 0 9956 401833.15625 1.0 0 0.0 7 2 Carbamidomethyl (C) _YVC(Carbamidomethyl (C))VWC(Carbamidomethyl (C))FC_ ENST00000369626.7_1_1:113455414-113455516:-|nuORF 6.354104778181461 0.7857632046190106 4 [YV]{[WT]|[RM]}D 5 -1 16.171 0.0 0.0 1.4242 0.0 0.0 0.0 468.1191414698748 468.1191414698748 0.6863623584101255 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [YV]{[WT]|[RM]}D 1.4242 - 126 1 1.664 63925.8 1.0 5330 4631 9956 HBL1_DMSO_200M_050219_2,9963 HBL1_DMSO_200M_050219_2,9963,YVCVWCFC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9964 54.079 145.0 292850.0 25 0 20618.0 + 24017 LVYEGQLSQA 10 84 554.287850566293 1106.5611481993858 2 554.2880126833916 MULTI CID FTMS 0 0 0 9956 321122.15625 1.0 0 0.0 8 Unmodified _LVYEGQLSQA_ nc|ENSG00000288701|Q5JSZ5-2|PRRC2B;nc|ENSG00000288701|Q5JSZ5-3|PRRC2B;nc|ENSG00000288701|Q5JSZ5-4|PRRC2B;nc|ENSG00000288701|Q5JSZ5-5|PRRC2B;nc|ENSG00000288701|Q5JSZ5|PRRC2B 18.1463463914782 0.5430639438673815 4 A 1 9 9.6777 0.0 0.0 0.87458 0.0 0.0 1017.5128140092476 0.0 1017.5128140092476 0.0 2.688010010505222 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.87458 + + 129 + 1 1.664 39327.1 1.0 5331 4631 9956 HBL1_DMSO_200M_050219_2,9964 HBL1_DMSO_200M_050219_2,9964,LVYEGQLSQA False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 9965 54.084 262.0 413030.0 25 0 48988.0 + 22502 LPVRGVEV 8 104 434.7658308144565 867.517108695713 2 434.7658874392509 MULTI CID FTMS 0 0 0 9956 266484.40625 0.508419127622636 -3 0.2031822204589843 9 Unmodified _LPVRGVEV_ ENSG00000113621|ENST00000358387|TXNDC15;nc|ENSG00000113621|Q96J42-2|TXNDC15 49.93300154707207 0.1395624531867191 4 {I|L}PV 3 5 36.643 0.0 0.0 4.2239 0.0 0.0 0.0 555.2905367486936 555.2905367486936 13.99166239860314 0.0 0.0 0.0 0 0.2742275032520141 1.2218487496163564 0.0 0.0 + {I|L}PV 4.2239 + + 135 + 1 1.664 88884.5 1.0 5332 4631 9956 HBL1_DMSO_200M_050219_2,9965 HBL1_DMSO_200M_050219_2,9965,LPVRGVEV False True LPVRGVEV 54.084014 434.765887439251 4666294.5 9956.0 nc|ENSG00000113621|Q96J42-2|TXNDC15;;ENSG00000113621|ENST00000358387|TXNDC15 4.650650978088379 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9966 54.097 745.0 291310.0 25 0 16159.0 + -1 VTERMFYEEM 10 158 683.7854305783219 1365.5563082234437 2 683.7870971560478 MULTI CID FTMS 0 0 0 9956 237613.765625 0.4365866644832473 -2 0.1173286437988281 10 2 Oxidation (M) _VTERM(Oxidation (M))FYEEM(Oxidation (M))_ REV__ENSG00000103051|ENST00000323786|COG4;REV__ENST00000526700.5_1_16:70530266-70542451:-|nuORF;REV__nc|ENSG00000103051|Q9H9E3-3|COG4;REV__nc|ENSG00000103051|Q9H9E3|COG4 8.745405648335112 0.6861838735306406 4 {[TV]|[{I|L}S]}AADTACCTAENP 14 -1 + 85.738 0.0 0.0 6.2786 6.2786 79.21 0.0 0.0 0.0 32.2538919721495 0.2300389035577978 0.2300389035577978 3.1730031879660885 0 1.1351518780601924 2.0 0.9802046884880936 0.1923877696554315 {[TV]|[{I|L}S]}AADTACCTAENP;{[TV]|[{I|L}S]}AADTA[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]AENP;{[TV]|[{I|L}S]}AADTACCTAEGGP;{[TV]|[{I|L}S]}AADTACCTAADGP;{[TV]|[{I|L}S]}AADTA[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]AEGGP;{[TV]|[{I|L}S]}AADTACCTADQP;{[TV]|[{I|L}S]}AADTA[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]AADGP;{[TV]|[{I|L}S]}AADTACCTADAGP;{[TV]|[{I|L}S]}AWTACCTAENP;{[TV]|[{I|L}S]}AADTA[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]ADQP 6.2786;6.0463;6.0088;5.9569;5.7748;5.7393;5.7229;5.6104;5.5989;5.507 -;-;-;-;-;-;-;-;-;- 10515 + 1 1.664 157028.2 1.0 5333 4631 9956 HBL1_DMSO_200M_050219_2,9966 HBL1_DMSO_200M_050219_2,9966,VTERMFYEEM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9967 54.102 270.0 385560.0 25 0 57661.0 + 22403 LPSYRHTITV 10 124 396.224549848351 1185.651820145253 3 396.2247802615166 MULTI CID FTMS 0 0 0 9956 221542.25 0.9629802793767414 1 -0.0598258972167968 11 Unmodified _LPSYRHTITV_ ENSG00000064313|ENST00000378164|TAF2 21.53697664764585 0.484802182336468 4 [{M(Oxidation (M))|F}V]{I|L} 3 9 25.686 0.0 0.0 2.1664 0.0 0.0 0.0 823.4240437877795 823.4240437877795 -1.7267595653252954 0.0 -1.7267595653252954 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{M(Oxidation (M))|F}V]{I|L} 2.1664 - 176 + 1 1.664 87244.0 1.0 5334 4631 9956 HBL1_DMSO_200M_050219_2,9967 HBL1_DMSO_200M_050219_2,9967,LPSYRHTITV False True LPSYRHTITV 54.1019 396.224780261517 2229537.5 9956.0 ENSG00000064313|ENST00000378164|TAF2 1.8601962725321453 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9968 54.105 164.0 431270.0 25 0 69728.0 + 39140 TYLETKGAAL 10 96 533.7930394968812 1065.5715260605623 2 533.7938110232353 MULTI CID FTMS 0 0 0 9956 188714.1875 0.5075673404500942 -2 0.1173286437988281 12 Unmodified _TYLETKGAAL_ ENSG00000135931|ENST00000611582|ARMC9;nc|ENSG00000135931|Q7Z3E5-2|ARMC9 31.26834338654808 0.266153677697784 4 [YT]{I|L}ET[KQ]A{I|L} 9 2 + 55.379 0.0 0.0 5.1971 5.1971 86.492 0.0 0.0 0.0 41.39969987625378 1.1709124234504031 1.1709124234504031 24.60824744119913 0 0.9247425010840048 2.0 0.4247425010840047 0.0 [YT]{I|L}ET[KQ]A{I|L};[KT][KT]TE{I|L}[{M(Oxidation (M))|F}V];[YT]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KQ][PG];RR[YG]R{I|L}{M(Oxidation (M))|F}V;[KT][QA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[{M(Oxidation (M))|F}V];[QA][KT]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[{M(Oxidation (M))|F}V];RR[YG]R[VP]Y 5.1971;2.8877;2.6371;1.8112;1.7385;1.2127;0.73701 -;-;-;-;-;-;- 207 + 1 1.664 60295.4 1.0 5335 4631 9956 HBL1_DMSO_200M_050219_2,9968 HBL1_DMSO_200M_050219_2,9968,TYLETKGAAL False True TYLETKGAAL 54.105127 533.793811023235 2307191.75 9956.0 ENSG00000135931|ENST00000611582|ARMC9;;nc|ENSG00000135931|Q7Z3E5-2|ARMC9 5.498091061909993 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9969 54.119 800.0 499260.0 25 0 68735.0 -1 0 225 401.2528936708007 800.4912344084014 2 401.2526428103447 MULTI CID FTMS 0 0 0 9956 162225.875 0.0682868347291771 -11 0.932964324951172 13 4 PHPP{I|L}K{I|L} 7 -1 + 66.562 0.0 0.0 8.3151 8.3151 89.819 0.0 0.0 0.0 31.549019599857445 7.225665361961546 7.225665361961546 7.225665361961546 0 1.5297966019298022 1.5228787452803376 0.0 0.4545391030138068 PHPP{I|L}K{I|L};PHPP{I|L}{I|L}K;PH{I|L}K{I|L}PP;P{I|L}HK{I|L}PP;{I|L}PHK{I|L}PP;{I|L}T[KG]RN{I|L} 8.3151;7.4125;4.3845;1.969;1.5243;0.37292 -;-;-;-;-;- 271 + 1 1.664 308616.7 0.7300000190734863 5336 4631 9956 HBL1_DMSO_200M_050219_2,9969 HBL1_DMSO_200M_050219_2,9969, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9971 54.123 7.7 7508000.0 25 0 1207300.0 + 21890 LPPEVNRI 8 53 469.27679076482383 936.5390285964476 2 469.2772094607353 MULTI CID FTMS 0 0 0 9970 7936258.0 0.8898920031853869 8 -0.6832466125488281 1 Unmodified _LPPEVNRI_ ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 14.838274106304384 0.6917062315640577 4 {I|L}PPE 4 4 56.186 0.0 0.0 5.9993 0.0 0.0 0.0 497.2853182428344 497.2853182428344 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPE 5.9993 + + 30 + 1 1.658 54197.9 1.0 5337 4632 9970 HBL1_DMSO_200M_050219_2,9971 HBL1_DMSO_200M_050219_2,9971,LPPEVNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9972 54.124 6.4 8756400.0 25 0 2326800.0 13008 HAQKMVEFL 9 81 368.19447723393614 1101.5616023020084 3 368.1943237185478 MULTI CID FTMS 0 0 0 9970 8221286.5 0.8524806259505304 11 -1.015888214111328 2 Unmodified _HAQKMVEFL_ ENSG00000169251|ENST00000351193|NMD3 11.640296217721598 0.521594087909532 4 {I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PQE{I|L}{M(Oxidation (M))|F} 8 8 36.173 0.0 0.0 3.2838 0.0 0.0 83.03780562568515 0.0 83.03780562568515 0.0 21.480669451974386 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.8807196863200843 {I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PQE{I|L}{M(Oxidation (M))|F} 3.2838 - 204 1 1.658 54403.1 1.0 5338 4632 9970 HBL1_DMSO_200M_050219_2,9972 HBL1_DMSO_200M_050219_2,9972,HAQKMVEFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9973 54.126 12.0 5458900.0 25 0 356090.0 + 5891 DPYKVYRI 8 81 351.8626635825482 1052.5661613478446 3 351.8624755740166 MULTI CID FTMS 0 0 0 9970 4321814.0 0.937062548906818 1 -0.0569229125976562 3 Unmodified _DPYKVYRI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 34.10243960390752 0.3329570729325616 4 DPYKV{I|L}[YR] 8 2 + 72.37 0.0 0.0 6.8756 6.8756 81.003 0.0 0.0 0.0 31.638568026386693 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.2742275032520141 1.5228787452803376 0.0 0.3252574989159953 DPYKV{I|L}[YR];DPYKVY[R{I|L}];DPYK{I|L}V[YR];DPY{I|L}KV[YR];D{I|L}{M(Oxidation (M))|F}KV{I|L}[YR];D{I|L}{M(Oxidation (M))|F}KVY[R{I|L}];D{I|L}{M(Oxidation (M))|F}K{I|L}V[YR];D{I|L}{M(Oxidation (M))|F}{I|L}KV[YR] 6.8756;6.5896;6.2806;5.6165;4.8822;4.5962;4.2872;3.6232 -;+;-;-;-;-;-;- + 146 + 1 1.658 62765.9 1.0 5339 4632 9970 HBL1_DMSO_200M_050219_2,9973 HBL1_DMSO_200M_050219_2,9973,DPYKVYRI False True DPYKVYRI 54.125568 351.862475574017 206550140.0 9970.0 nc|ENSG00000137265|Q15306-2|IRF4;;ENSG00000137265|ENST00000380956|IRF4;;chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;;ENST00000495137.5_1_6:394829-397293:+|nuORF 6.8737724622090655 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9974 54.127 13.0 3698100.0 25 0 376930.0 + 9954 FPGKHFQEI 9 69 551.7875691100098 1101.5605852868196 2 551.7877685427666 MULTI CID FTMS 0 0 0 9970 4030182.5 0.8605486421776575 11 -1.015888214111328 4 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 30.7034409873982 0.1405282614900322 4 {I|L}MY 3 9 39.213 0.0 0.0 3.5598 0.0 0.0 0.0 691.3320624987323 691.3320624987323 17.57515625508539 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}MY 3.5598 - 194 + 1 1.658 43099.0 1.0 5340 4632 9970 HBL1_DMSO_200M_050219_2,9974 HBL1_DMSO_200M_050219_2,9974,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9975 54.128 17.0 4194200.0 25 0 448930.0 + 4162 DAPHPPLKI 9 81 329.85914441787924 986.5556038538376 3 329.8588744997978 MULTI CID FTMS 0 0 0 9970 3362575.5 0.0878758899896438 -10 0.7943878173828125 5 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 19.256988751693697 0.3154191944385105 4 {[DA]|[EG]}PH{I|L} 5 4 43.768 0.0 0.0 4.4364 0.0 0.0 0.0 450.2747591608032 450.2747591608032 32.79885926180398 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {[DA]|[EG]}PH{I|L} 4.4364 - 53 + 1 1.658 61510.4 1.0 5341 4632 9970 HBL1_DMSO_200M_050219_2,9975 HBL1_DMSO_200M_050219_2,9975,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9976 54.129 16.0 3687500.0 25 0 432610.0 + 4168 DAPHPPLKI 9 88 494.2848575762056 986.5551622192112 2 494.2847778201103 MULTI CID FTMS 0 0 0 9970 3278256.5 0.0888027588787955 -10 0.7943878173828125 6 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 47.74868867922204 0.0453060283459952 4 {[DA]|[EG]}PHPP{I|L}K{I|L} 9 0 + 52.876 0.0 0.0 5.3596 5.3596 87.148 0.0 0.0 0.0 21.12704280191288 36.67764549590123 21.12704280191288 24.719712763997563 0 1.9564608101803795 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}PHPP{I|L}K{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[DA]|[EG]}PP{I|L}K{I|L};[K{I|L}]{[WN]|[YH]}ADK{I|L} 5.3596;2.854;1.1417 +;-;- + 95 1 1.658 50703.9 1.0 5342 4632 9970 HBL1_DMSO_200M_050219_2,9976 HBL1_DMSO_200M_050219_2,9976,DAPHPPLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9977 54.134 289.0 345980.0 25 0 21856.0 + -1 VVAPVTHVSV 10 137 504.3010338162978 503.2937573496978 1 504.2972595095634 MULTI CID FTMS 0 0 0 9970 189271.5 0.2292293575842757 7 -0.5702705383300781 7 ENSG00000120690|ENST00000239882|ELF1 4 VVA 3 -1 25.062 0.0 0.0 4.9795 0.0 0.0 0.0 231.09610044956028 231.09610044956028 14.46573663677258 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 VVA 4.9795 - 60 1 1.658 79888.8 1.0 5343 4632 9970 HBL1_DMSO_200M_050219_2,9977 HBL1_DMSO_200M_050219_2,9977, False False VVAPVTHVSV 54.13441 504.297259509563 1528256.125 9970.0 ENSG00000120690|ENST00000239882|ELF1 6.8391828536987305 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9978 54.148 800.0 169270.0 25 0 9590.8 -1 KALRMTDAQV 10 174 574.8059998429891 1147.597446752778 2 574.8065673708916 MULTI CID FTMS 0 0 0 9970 142288.078125 0.8898637790054212 4 -0.2455101013183593 8 Oxidation (M) _KALRM(Oxidation (M))TDAQV_ ENSG00000115297|ENST00000233638|TLX2 21.53697664764585 0.484802182336468 4 {NN|[MP]|[D{I|L}]|[EV]}TRTG{M(Oxidation (M))|F}Q 8 -1 32.114 0.0 0.0 2.7984 0.0 0.0 0.0 226.1554050870156 226.1554050870156 10.523236131899155 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.4604093769761874 0.0 {NN|[MP]|[D{I|L}]|[EV]}TRTG{M(Oxidation (M))|F}Q 2.7984 - 4941 1 1.658 102839.2 0.959999978542328 5344 4632 9970 HBL1_DMSO_200M_050219_2,9978 HBL1_DMSO_200M_050219_2,9978,KALRMTDAQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9979 54.162 800.0 158950.0 25 0 6748.5 + 2410 AQQEAQRAQFL 11 133 645.334823496796 1288.655094060392 2 645.3340942263603 MULTI CID FTMS 0 0 0 9970 129390.78125 0.9627530915079374 1 -0.0569229125976562 9 Unmodified _AQQEAQRAQFL_ ENSG00000215021|ENST00000535923|PHB2 61.08992128646608 0.0647217981198246 4 [QA]QEAQR 7 4 45.243 0.0 0.0 3.5109 0.0 0.0 0.0 474.2512946055319 474.2512946055319 12.049251376874508 0.0 0.0 0.0 0 1.1861818737241734 0.0 0.3807196863200844 0.7134679910804405 + [QA]QEAQR 3.5109 + + 1381 + 1 1.658 94784.2 0.9300000071525574 5345 4632 9970 HBL1_DMSO_200M_050219_2,9979 HBL1_DMSO_200M_050219_2,9979,AQQEAQRAQFL True True AQQEAQRAQFL 54.162079 645.33409422636 1187322.125 9970.0 ENSG00000215021|ENST00000535923|PHB2 6.641143004099528 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9980 54.176 800.0 249410.0 25 0 19526.0 + 32406 RYVPRASYF 9 207 386.8734837197688 1157.5986217595064 3 387.2075378298759 MULTI CID FTMS 0 0 0 9970 83023.5546875 0.0566271055107863 6 -0.4398880004882812 10 Unmodified _RYVPRASYF_ ENSG00000112576|ENST00000372991|CCND3;ENST00000510058.1_1_6:41904922-41909441:-|nuORF;nc|ENSG00000112576|P30281-3|CCND3 18.1463463914782 0.3454829746528889 4 ASY{M(Oxidation (M))|F} 4 5 31.472 0.0 0.0 2.7188 0.0 0.0 671.3874220611957 0.0 671.3874220611957 0.0 16.25569708000178 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 + ASY{M(Oxidation (M))|F} 2.7188 + + 246 1 1.658 157822.8 0.5799999833106995 5346 4632 9970 HBL1_DMSO_200M_050219_2,9980 HBL1_DMSO_200M_050219_2,9980,RYVPRASYF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9982 54.18 28.0 1744200.0 25 0 453830.0 + 17267 KLPEKWESV 9 55 558.3084076216184 1114.6022623100366 2 558.3087036013603 MULTI CID FTMS 0 0 0 9981 1839848.625 0.8960507756803743 1 -0.0600166320800781 1 Unmodified _KLPEKWESV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 20.41453444215458 0.284085796332423 4 K{I|L}PE 4 5 36.67 0.0 0.0 3.29 0.0 0.0 0.0 644.3065889947874 644.3065889947874 6.704780657136524 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 + K{I|L}PE 3.29 + + 42 + 1 1.658 41990.7 1.0 5347 4633 9981 HBL1_DMSO_200M_050219_2,9982 HBL1_DMSO_200M_050219_2,9982,KLPEKWESV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9983 54.181 34.0 1651700.0 25 0 301140.0 + 6063 DSIIVKEV 8 80 451.76334433117455 901.5121357291492 2 451.7635986208916 MULTI CID FTMS 0 0 0 9981 1580202.125 0.7726222703229435 2 -0.1074562072753906 2 Unmodified _DSIIVKEV_ ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79827372-79827747:-|nuORF 46.020951573049366 0.1579632664462935 4 {[DS]|[MA]|[CV]|TT}{I|L}{I|L} 4 4 22.803 0.0 0.0 2.5294 0.0 0.0 0.0 470.2622937704179 470.2622937704179 3.147868008430386 0.0 0.0 0.0 0 1.0 0.0 0.7396518287104438 0.0 + {[DS]|[MA]|[CV]|TT}{I|L}{I|L} 2.5294 + + 106 1 1.658 47566.2 1.0 5348 4633 9981 HBL1_DMSO_200M_050219_2,9983 HBL1_DMSO_200M_050219_2,9983,DSIIVKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9984 54.182 18.0 3190700.0 25 0 637030.0 + 14645 IILDEAHNV 9 70 512.2773930607841 1022.5402331883682 2 512.2776977419853 MULTI CID FTMS 0 0 0 9981 3095247.75 0.7092431503365141 -1 0.0569229125976562 3 Unmodified _IILDEAHNV_ ENSG00000116830|ENST00000369466|TTF2 32.78568957990786 0.1150597335874693 4 {I|L}{I|L}{I|L}DEA 6 3 68.365 0.0 0.0 6.6858 0.0 0.0 0.0 365.1585225277644 365.1585225277644 43.62826806974688 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7742275032520141 0.0 + {I|L}{I|L}{I|L}DEA 6.6858 + + 370 + 1 1.658 51316.2 1.0 5349 4633 9981 HBL1_DMSO_200M_050219_2,9984 HBL1_DMSO_200M_050219_2,9984,IILDEAHNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9985 54.184 19.0 2989100.0 25 0 313580.0 + 4571 DAYRPVGL 8 91 445.7399106781619 889.4652684231238 2 445.7403747439384 MULTI CID FTMS 0 0 0 9981 2493941.5 0.4084453377098388 -3 0.1974945068359375 4 Unmodified _DAYRPVGL_ ENSG00000179094|ENST00000317276|PER1;nc|ENSG00000179094|O15534-4|PER1 37.97399986684836 0.2681860861828418 4 {[DA]|[EG]}YR[VP]G{I|L} 8 0 + 58.394 0.0 0.0 6.5651 6.5651 85.286 0.0 0.0 0.0 9.163865622122673 9.163865622122673 9.163865622122673 7.257724967479859 0 1.7302046884880935 2.0 0.0 0.0 + + {[DA]|[EG]}YR[VP]G{I|L};{[DA]|[EG]}K[KQ]MG{I|L};WY[VG][VP]G{I|L};{[SA]|[TG]}{I|L}{I|L}MGEG{I|L};[{I|L}T]{[VA]|[{I|L}G]}MGEG{I|L};{[SA]|[TG]}{I|L}{I|L}MWG{I|L};[{I|L}T]{[VA]|[{I|L}G]}MWG{I|L};{[VA]|[{I|L}G]}[{I|L}T]MGEG{I|L};{[DA]|[EG]}YR{[VA]|[{I|L}G]}[VP];{[VA]|[{I|L}G]}[{I|L}T]MWG{I|L} 6.5651;5.7492;4.3166;4.0647;3.944;3.8728;3.7521;3.7188;3.6649;3.5269 +;-;-;-;-;-;-;-;-;- + 319 + 1 1.658 51569.9 1.0 5350 4633 9981 HBL1_DMSO_200M_050219_2,9985 HBL1_DMSO_200M_050219_2,9985,DAYRPVGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9986 54.185 30.0 1570500.0 25 0 116910.0 + 30654 RFPDGTNGL 9 84 488.7464410504657 975.4783291677312 2 488.7458679080009 MULTI CID FTMS 0 0 0 9981 1481761.0 0.9643525739252844 -4 0.2340774536132812 5 Unmodified _RFPDGTNGL_ ENSG00000164442|ENST00000367651|CITED2;nc|ENSG00000164442|Q99967-2|CITED2 31.26834338654808 0.1333407332142048 4 [R{M(Oxidation (M))|F}][DP]GTNG{I|L} 9 0 + 53.944 0.0 0.0 5.53 5.53 81.636 0.0 0.0 0.0 3.925449767853309 35.783409326844264 3.925449767853309 7.7815125038364386 0 0.8807196863200843 0.0 0.3252574989159953 0.0 + + [R{M(Oxidation (M))|F}][DP]GTNG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTNG{I|L};[R{M(Oxidation (M))|F}][DP]GTGGG{I|L};[VP]GS[W{M(Oxidation (M))|F}]NG{I|L};[NG]{I|L}[KC]GTNG{I|L};[VP][HD][QP]NG{I|L};[NG]{I|L}[C(Carbamidomethyl (C))K]TNG{I|L};[VP][HN][EP]NG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTGGG{I|L};[VP]GS[W{M(Oxidation (M))|F}]GGG{I|L} 5.53;4.7323;4.586;4.5538;4.5149;3.866;3.8453;3.8065;3.7883;3.6098 +;-;-;-;-;-;-;-;-;- + 217 1 1.658 41710.4 1.0 5351 4633 9981 HBL1_DMSO_200M_050219_2,9986 HBL1_DMSO_200M_050219_2,9986,RFPDGTNGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9987 54.187 111.0 707970.0 25 0 68851.0 + 35106 SQVTVAVRV 9 94 479.78811094714194 957.561668961084 2 479.7891113162041 MULTI CID FTMS 0 0 0 9981 395472.40625 0.6647729785809027 -2 0.1167488098144531 6 Unmodified _SQVTVAVRV_ ENSG00000118193|ENST00000367350|KIF14 29.84058131909904 0.1515068451768857 4 {[QS]|[NT]}VTVAVRV 9 0 + 47.929 0.0 0.0 5.0053 5.0053 75.154 0.0 0.0 0.0 20.482004349463523 13.728721920568248 13.728721920568248 3.979400086720375 0 1.0 0.0 0.0 0.3807196863200844 + + {[QS]|[NT]}VTVAVRV;{[QS]|[NT]}VTVVARV;{[QS]|[NT]}VVTAVRV;{[QS]|[NT]}VVTVARV;{[QS]|[NT]}V[{I|L}A]SVRV;{[QS]|[NT]}VTVV{[NV]|[RG]}{I|L};{[QS]|[NT]}VVTV{[NV]|[RG]}{I|L} 5.0053;4.5898;4.5071;4.0915;3.2783;3.1998;2.7015 +;-;-;-;-;-;- + 210 + 1 1.658 67836.0 1.0 5352 4633 9981 HBL1_DMSO_200M_050219_2,9987 HBL1_DMSO_200M_050219_2,9987,SQVTVAVRV False True SQVTVAVRV 54.187189 479.789111316204 10040417.0 9981.0 ENSG00000118193|ENST00000367350|KIF14 5.919608434041341 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9988 54.19 165.0 582480.0 25 0 70211.0 18793 LAPPASPGI 9 104 411.7399133306207 821.4652737280413 2 411.7397949099541 MULTI CID FTMS 0 0 0 9981 335530.25 0.7901495136301381 -1 0.0569229125976562 7 Unmodified _LAPPASPGI_ ENSG00000198858|ENST00000361574|R3HDM4;ENST00000590454.2_1_19:900936-902165:-|nuORF 46.92087301778293 0.0471210510596396 4 [{I|L}A]TA{I|L}S 6 6 52.427 0.0 0.0 6.3821 0.0 0.0 0.0 262.1203076724351 262.1203076724351 37.82251573369031 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.7059771852360797 0.0 [{I|L}A]TA{I|L}S 6.3821 - 263 + 1 1.658 79953.8 1.0 5353 4633 9981 HBL1_DMSO_200M_050219_2,9988 HBL1_DMSO_200M_050219_2,9988,LAPPASPGI True True LAPRVPGL 54.190424 411.739794909954 2805771.0 9981.0 ENST00000315927.8_1_1:207223059-207224371:-|nuORF 1.8505367636680603 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9989 54.194 212.0 377250.0 25 0 63489.0 -1 0 113 304.69641639045625 607.3782798477125 2 304.6961852908134 MULTI CID FTMS 0 0 0 9981 255658.578125 0.6403272988976938 -2 0.1167488098144531 8 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 1.658 68544.4 1.0 5354 4633 9981 HBL1_DMSO_200M_050219_2,9989 HBL1_DMSO_200M_050219_2,9989, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 9990 54.208 800.0 234760.0 25 0 12846.0 + 38644 TTIKAFFPKK 10 228 394.2414100849522 1179.7024008550568 3 394.2414123415947 MULTI CID FTMS 0 0 0 9981 143743.1875 0.007661359202861 13 -1.2336273193359375 9 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 26.268140514670165 0.3785003716575977 4 TT{I|L}KY{I|L}WKK 9 4 + 84.137 0.0 0.0 7.1321 7.1321 93.736 0.0 0.0 0.0 65.32981942683787 15.74753464049519 15.74753464049519 22.687499280517635 0 0.7769763493273798 1.3979400086720375 0.0 0.3494850021680094 TT{I|L}KY{I|L}WKK;TT{I|L}KY{I|L}KKW;TT{I|L}KY{I|L}[RK]AS;TT{I|L}KY{I|L}[RK]GT;{[HG]|PP}[QA][KS]KK{I|L}PS 7.1321;5.2089;4.4002;4.1707;1.0962 -;-;-;-;- 330 + 1 1.658 148858.9 0.7699999809265137 5355 4633 9981 HBL1_DMSO_200M_050219_2,9990 HBL1_DMSO_200M_050219_2,9990,TTIKAFFPKK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 9991 54.222 800.0 166030.0 25 0 8427.5 + 41700 VPSESHPLSTI 11 153 583.8063401714949 1165.5981274097896 2 583.8054687380791 MULTI CID FTMS 0 0 0 9981 132531.671875 0.6701900917585449 -2 0.1167488098144531 10 Unmodified _VPSESHPLSTI_ ENSG00000145734|ENST00000358731|BDP1;ENST00000508917.6_1_5:70751704-70841064:+|nuORF;nc|ENSG00000145734|A6H8Y1-2|BDP1;nc|ENSG00000145734|A6H8Y1-3|BDP1;nc|ENSG00000145734|A6H8Y1-4|BDP1;nc|ENSG00000145734|A6H8Y1-6|BDP1;nc|ENSG00000145734|A6H8Y1-7|BDP1 118.0683919894846 0.0345178255955785 4 VPSE[HS][{I|L}P]ST{I|L} 11 0 + 73.714 0.0 0.0 6.3242 6.3242 78.369 0.0 0.0 0.0 16.6909541369362 11.056821904864355 11.056821904864355 2.887254899964361 0 2.293157681736544 1.5228787452803376 1.214559192431053 0.0 + + VPSE[HS][{I|L}P]ST{I|L};VPSD[HT][{I|L}P]ST{I|L};VPSE[HS][{I|L}P]TTV;VPS[WM]{M(Oxidation (M))|F}VST{I|L};[VP]SE[HT]PST{I|L}V;VPSE[HS][{I|L}P]TS{I|L};VPSD[HT][{I|L}P]TTV;VP[YR]{I|L}M{M(Oxidation (M))|F}{I|L}Q;[VP]SE[HS][TP]T{I|L}V;VPSD[HT][{I|L}P]TS{I|L} 6.3242;6.0765;5.351;5.2273;5.159;5.1315;5.1032;4.9703;4.909;4.8838 +;-;-;-;-;-;-;-;-;- + 4625 + 1 1.658 103334.3 0.959999978542328 5356 4633 9981 HBL1_DMSO_200M_050219_2,9991 HBL1_DMSO_200M_050219_2,9991,VPSESHPLSTI True True VPSESHPLSTI 54.222082 583.805468738079 1001359.6875 9981.0 ENSG00000145734|ENST00000358731|BDP1;;nc|ENSG00000145734|A6H8Y1-6|BDP1;;nc|ENSG00000145734|A6H8Y1-3|BDP1;;ENST00000508917.6_1_5:70751704-70841064:+|nuORF;;nc|ENSG00000145734|A6H8Y1-7|BDP1;;nc|ENSG00000145734|A6H8Y1-4|BDP1;;nc|ENSG00000145734|A6H8Y1-2|BDP1 6.694468339284261 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9992 54.236 800.0 283640.0 25 0 37265.0 + 36307 SYLDRTEQL 9 187 562.7827439880654 1123.5509350429306 2 562.7841674685478 MULTI CID FTMS 0 0 0 9981 126026.6875 0.3169275788371158 -2 0.1167488098144531 11 Unmodified _SYLDRTEQL_ ENSG00000065268|ENST00000585809|WDR18 67.83816525789305 0.0219346420158844 4 [DG]EE[KA]{I|L}YS{I|L} 10 9 + 39.195 0.0 0.0 3.4885 3.4885 68.85 0.0 0.0 0.0 3.357921019231938 4.485965895652043 3.357921019231938 3.357921019231938 0 0.4247425010840047 0.619788758288394 0.7134679910804405 0.3252574989159953 [DG]EE[KA]{I|L}YS{I|L};{[DA]|[EG]}DE[KA]{I|L}YS{I|L};[DG]TV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}[MT];[DG]T{I|L}Q[{M(Oxidation (M))|F}V]{I|L}[MT];EEKQ[{M(Oxidation (M))|F}V]{I|L}[MT];[DG]ETV{I|L}QYS{I|L};{[QN]|[E{I|L}]|[KN]}RY[QA]{I|L}[MT];{[{M(Oxidation (M))|F}C]|[YS]}{I|L}DVV[DN]S{I|L};[DG]ETVQ{I|L}YS{I|L};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}DVV[QP]G{M(Oxidation (M))|F} 3.4885;3.1896;3.0892;3.0601;3.0307;3.015;3.0027;2.8918;2.8583;2.8506 -;-;-;-;-;-;-;-;-;- 4520 1 1.658 167225.2 0.9300000071525574 5357 4633 9981 HBL1_DMSO_200M_050219_2,9992 HBL1_DMSO_200M_050219_2,9992,SYLDRTEQL True True SYLDRTEQL 54.235916 562.784167468548 3096009.5 9981.0 chr19:993863-994020|12|14.17|0.65|4.44|+|0|None,WDR18|1;;ENSG00000065268|ENST00000585809|WDR18 7.189252217610677 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9994 54.24 3.2 15701000.0 25 0 2356000.0 + 23608 LTPQPGPTV 9 84 455.2555885603596 908.4966241875192 2 455.2559081912041 MULTI CID FTMS 0 0 0 9993 17907710.0 0.9729997435429326 -2 0.1169395446777343 1 Unmodified _LTPQPGPTV_ REV__ENSG00000203485|ENST00000392634|INF2;REV__nc|ENSG00000203485|Q27J81-2|INF2 54.773552608820026 0.0299037012502309 4 [{I|L}T]TGP 5 -1 31.247 0.0 0.0 3.4395 0.0 0.0 0.0 436.2191428011578 436.2191428011578 15.44083532467928 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 1.0 0.0 [{I|L}T]TGP 3.4395 - 235 1 1.648 41420.5 1.0 5358 4634 9993 HBL1_DMSO_200M_050219_2,9994 HBL1_DMSO_200M_050219_2,9994,LTPQPGPTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9995 54.241 19.0 2614700.0 25 0 497910.0 + 41835 VPYEPPQV 8 63 464.74269551758135 927.4708381019628 2 464.7426635622978 MULTI CID FTMS 0 0 0 9993 2935699.5 0.4002316700591908 4 -0.3229484558105469 2 Unmodified _VPYEPPQV_ ENSG00000073282|ENST00000264731|TP63;ENSG00000078900|ENST00000378295|TP73;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;ENST00000603364.5_1_1:3607439-3646013:+|nuORF;nc|ENSG00000073282|Q9H3D4-10|TP63;nc|ENSG00000073282|Q9H3D4-11|TP63;nc|ENSG00000073282|Q9H3D4-12|TP63;nc|ENSG00000073282|Q9H3D4-2|TP63;nc|ENSG00000073282|Q9H3D4-3|TP63;nc|ENSG00000073282|Q9H3D4-4|TP63;nc|ENSG00000073282|Q9H3D4-5|TP63;nc|ENSG00000073282|Q9H3D4-6|TP63;nc|ENSG00000073282|Q9H3D4-7|TP63;nc|ENSG00000073282|Q9H3D4-8|TP63;nc|ENSG00000073282|Q9H3D4-9|TP63;nc|ENSG00000078900|O15350-10|TP73;nc|ENSG00000078900|O15350-11|TP73;nc|ENSG00000078900|O15350-12|TP73;nc|ENSG00000078900|O15350-13|TP73;nc|ENSG00000078900|O15350-2|TP73;nc|ENSG00000078900|O15350-3|TP73;nc|ENSG00000078900|O15350-4|TP73;nc|ENSG00000078900|O15350-5|TP73;nc|ENSG00000078900|O15350-6|TP73;nc|ENSG00000078900|O15350-8|TP73;nc|ENSG00000078900|O15350-9|TP73;TBL1XR1-TP73|1|fusion;TBL1XR1-TP73|2|fusion;TBL1XR1-TP73|3|fusion;TBL1XR1-TP73|4|fusion;TBL1XR1-TP73|5|fusion;TBL1XR1-TP73|6|fusion 34.18733598223924 0.3315367612694167 4 [VP]EYP 5 4 29.186 0.0 0.0 3.1469 0.0 0.0 0.0 339.1669882758917 339.1669882758917 15.20689673945462 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.3807196863200844 0.0 [VP]EYP 3.1469 - 127 1 1.648 43611.8 1.0 5359 4634 9993 HBL1_DMSO_200M_050219_2,9995 HBL1_DMSO_200M_050219_2,9995,VPYEPPQV False True VPYEPPQV 54.24133 464.742663562298 154923408.0 9993.0 nc|ENSG00000078900|O15350-6|TP73;;nc|ENSG00000073282|Q9H3D4-2|TP63;;ENSG00000078900|ENST00000378295|TP73;;nc|ENSG00000073282|Q9H3D4-6|TP63;;nc|ENSG00000073282|Q9H3D4-11|TP63;;nc|ENSG00000078900|O15350-5|TP73;;TBL1XR1-TP73|4|fusion;;nc|ENSG00000073282|Q9H3D4-9|TP63;;ENSG00000073282|ENST00000264731|TP63;;nc|ENSG00000078900|O15350-12|TP73;;nc|ENSG00000078900|O15350-11|TP73;;nc|ENSG00000078900|O15350-8|TP73;;nc|ENSG00000078900|O15350-10|TP73;;nc|ENSG00000078900|O15350-9|TP73;;nc|ENSG00000078900|O15350-3|TP73;;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;;nc|ENSG00000073282|Q9H3D4-10|TP63;;nc|ENSG00000078900|O15350-2|TP73;;nc|ENSG00000073282|Q9H3D4-3|TP63;;nc|ENSG00000073282|Q9H3D4-7|TP63;;nc|ENSG00000073282|Q9H3D4-4|TP63;;TBL1XR1-TP73|2|fusion;;nc|ENSG00000073282|Q9H3D4-5|TP63;;TBL1XR1-TP73|5|fusion;;nc|ENSG00000078900|O15350-4|TP73;;ENST00000603364.5_1_1:3607439-3646013:+|nuORF;;TBL1XR1-TP73|6|fusion;;nc|ENSG00000073282|Q9H3D4-8|TP63;;nc|ENSG00000073282|Q9H3D4-12|TP63;;TBL1XR1-TP73|1|fusion;;nc|ENSG00000078900|O15350-13|TP73;;TBL1XR1-TP73|3|fusion 2.228845328092575 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9996 54.243 27.0 2127800.0 25 0 419190.0 + 41424 VPLFNIAKV 9 50 500.81130176593626 999.6080505986724 2 500.8112670779228 MULTI CID FTMS 0 0 0 9993 2242953.25 0.7124715535515088 1 -0.0474395751953125 3 Unmodified _VPLFNIAKV_ REV__ENSG00000204681|ENST00000377034|GABBR1;REV__nc|ENSG00000204681|Q9UBS5-3|GABBR1;REV__nc|ENSG00000204681|Q9UBS5-4|GABBR1;REV__nc|ENSG00000204681|Q9UBS5-5|GABBR1 19.256988751693697 0.3154191944385105 4 AVK 3 -1 31.554 0.0 0.0 3.1566 0.0 0.0 683.3964549949601 0.0 683.3964549949601 0.0 16.671816459891105 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 AVK 3.1566 - 94 + 1 1.648 51700.5 1.0 5360 4634 9993 HBL1_DMSO_200M_050219_2,9996 HBL1_DMSO_200M_050219_2,9996,VPLFNIAKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 9997 54.244 36.0 1686500.0 25 0 247730.0 + 44912 YPPPEVRNI 9 59 542.7934218667502 1083.5722908003004 2 542.7932617068291 MULTI CID FTMS 0 0 0 9993 1760395.375 0.095035477791526 22 -2.09305191040039 4 Unmodified _YPPPEVRNI_ ENSG00000099995|ENST00000215793|SF3A1;ENST00000463818.1_1_22:30742246-30752805:-|nuORF;ENST00000496189.1_1_22:30748938-30752805:-|nuORF;nc|ENSG00000099995|Q15459-2|SF3A1 15.738622578938676 0.4106572216562794 4 YPPPE 5 4 62.206 0.0 0.0 5.7408 0.0 0.0 0.0 497.2858737066092 497.2858737066092 55.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YPPPE 5.7408 + + 25 + 1 1.648 54946.0 1.0 5361 4634 9993 HBL1_DMSO_200M_050219_2,9997 HBL1_DMSO_200M_050219_2,9997,YPPPEVRNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9998 54.246 81.0 975970.0 25 0 69845.0 + 41482 VPLSQVKSI 9 123 485.8003623638161 969.5861717944324 2 485.8006774783134 MULTI CID FTMS 0 0 0 9993 890272.5 0.4943077617543998 2 -0.128570556640625 5 Unmodified _VPLSQVKSI_ ENSG00000177485|ENST00000557385|ZBTB33 74.19965305603844 0.0194755241623067 4 VP{I|L}SQVKS{I|L} 9 0 + 90.83 0.0 0.0 9.3679 9.3679 81.593 0.0 0.0 0.0 29.488474775526186 0.9016731452505696 0.9016731452505696 0.9016731452505696 0 1.5994850021680094 1.3010299956639813 1.4436726795685342 0.0 + + VP{I|L}SQVKS{I|L};VP{I|L}SQVKTV;VP{I|L}S[AG]VKS{I|L};VP{I|L}S[AG]VKTV;[VP]TQVVKTV;[{I|L}P]SQVVKTV;[VP]TQVKVTV;[{I|L}P]SQVKVTV;[VP]{I|L}SQVKTV;[{I|L}P]VSQVKTV 9.3679;9.2749;8.4182;8.3252;5.2023;4.9971;4.9154;4.7102;4.663;4.4578 +;-;-;-;-;-;-;-;-;- + 1653 + 1 1.648 62911.4 1.0 5362 4634 9993 HBL1_DMSO_200M_050219_2,9998 HBL1_DMSO_200M_050219_2,9998,VPLSQVKSI True True VPLSQVKSI 54.245514 485.800677478313 25434416.0 9993.0 ENSG00000177485|ENST00000557385|ZBTB33 5.491428852081299 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 9999 54.247 55.0 1040900.0 25 0 115330.0 + 29789 QPYYPQHPMV 10 71 630.2967187476028 1258.5788845620054 2 630.2959472537041 MULTI CID FTMS 0 0 0 9993 644804.0 0.5622065773750748 -2 0.1169395446777343 6 Unmodified _QPYYPQHPMV_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 20.453626601364224 0.5043500229302764 4 HE{M(Oxidation (M))|F}HP{[ET]|[MV]} 7 6 28.984 0.0 0.0 2.3029 0.0 0.0 363.1805093898867 0.0 363.1805093898867 0.0 21.99433219358141 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 HE{M(Oxidation (M))|F}HP{[ET]|[MV]} 2.3029 - 194 + 1 1.648 47500.2 1.0 5363 4634 9993 HBL1_DMSO_200M_050219_2,9999 HBL1_DMSO_200M_050219_2,9999,QPYYPQHPMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10000 54.25 156.0 485890.0 25 0 55961.0 + -1 YFYGGLMTTQF 11 66 672.3042163728708 1342.5938798125414 2 672.3046142458916 MULTI CID FTMS 0 0 0 9993 397687.34375 0.7342939166327389 -1 0.0600166320800781 7 Oxidation (M) _YFYGGLM(Oxidation (M))TTQF_ REV__ENSG00000156006|ENST00000286479|NAT2 13.042465956692816 0.7638483625850725 4 MQQWD 5 -1 29.57 0.0 0.0 2.2024 0.0 0.0 344.1819740905276 307.12790857486567 651.3098826653933 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.2887254899964357 MQQWD 2.2024 - 261 + 1 1.648 60375.3 1.0 5364 4634 9993 HBL1_DMSO_200M_050219_2,10000 HBL1_DMSO_200M_050219_2,10000,YFYGGLMTTQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10001 54.256 308.0 486670.0 25 0 33387.0 27237 PGPHSGGG 8 179 333.15375922606967 664.2929655189394 2 333.1535522341728 MULTI CID FTMS 0 0 0 9993 235575.8125 0.6142437337520406 -1 0.0600166320800781 8 Unmodified _PGPHSGGG_ ENST00000357877.6_1_2:74906957-74907104:+|nuORF 0.0 0.8243325171867699 4 [{I|L}P]TMTC 6 7 + 47.679 0.0 0.0 7.1775 7.1775 90.951 0.0 0.0 0.0 9.542425094393252 16.197887582883936 9.542425094393252 9.542425094393252 0 0.5451140161145328 2.0 0.3054621874040891 0.0 [{I|L}P]TMTC;[TP]{I|L}MTC;T{I|L}PMTC;[MT][{I|L}P]TC;[MT]{[RE]|[WV]}E 7.1775;5.741;4.2885;1.7118;0.59092 -;-;-;-;- 110 1 1.648 120542.6 1.0 5365 4634 9993 HBL1_DMSO_200M_050219_2,10001 HBL1_DMSO_200M_050219_2,10001,PGPHSGGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10002 54.269 800.0 199330.0 25 0 6623.0 12086 GQGDERDMQL 10 183 574.7549322195338 1147.4953115058674 2 574.7551147341728 MULTI CID FTMS 0 0 0 9993 117568.4765625 0.9319947221854932 -1 0.0600166320800781 9 Unmodified _GQGDERDMQL_ ENSG00000092148|ENST00000399332|HECTD1;ENST00000556474.1_1_14:31672823-31675142:-|nuORF 31.26834338654808 0.266153677697784 4 [DN]QETTAEQ{I|L} 10 8 + 42.419 0.0 0.0 3.6967 3.6967 74.77 0.0 0.0 0.0 2.2969624387961574 7.951156340800452 2.2969624387961574 7.951156340800452 0 0.9731975075880328 0.0 1.1307196863200843 0.4247425010840047 [DN]QETTAEQ{I|L};[DN]QETTAE{I|L}Q;[DN]QET[WD]Q{I|L};[DN]Q{M(Oxidation (M))|F}[PS]AEQ{I|L};[DN][AG]ETTAEQ{I|L};[DN]Q{M(Oxidation (M))|F}{[SA]|[TG]}PEQ{I|L};[DN]QETT[DV]N{I|L};[DN]QETTAE[AG]{I|L};[DN]QEE{[WS]|[C(Carbamidomethyl (C)){I|L}]}Q{I|L};[DN]QET[WD]{I|L}Q 3.6967;3.0037;2.9812;2.9375;2.898;2.8263;2.6452;2.5279;2.412;2.2883 -;-;-;-;-;-;-;-;-;- 5945 + 1 1.648 117690.1 0.9399999976158142 5366 4634 9993 HBL1_DMSO_200M_050219_2,10002 HBL1_DMSO_200M_050219_2,10002,GQGDERDMQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10003 54.283 800.0 132470.0 25 0 19921.0 -1 0 70 1075.4377347028712 3223.291374708814 3 1075.773730456829 MULTI CID FTMS 0 0 0 9993 99279.5859375 0.4202022321617227 -3 0.1767654418945312 10 4 VTVAV 5 -1 21.542 0.0 0.0 0.66833 0.0 0.0 2369.80213017932 381.1784762018188 2750.980606381139 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 VTVAV 0.66833 - 396 + 1 1.648 84869.7 0.6899999976158142 5367 4634 9993 HBL1_DMSO_200M_050219_2,10003 HBL1_DMSO_200M_050219_2,10003, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10005 54.288 4.7 8298700.0 25 0 658470.0 + 13689 HQIEAVDGEEL 11 58 620.2961617544174 1238.5777705756348 2 620.2966796755791 MULTI CID FTMS 0 0 0 10004 12003498.0 0.9774105630711452 1 -0.0811309814453125 1 Unmodified _HQIEAVDGEEL_ ENSG00000105404|ENST00000222008|RABAC1;ENST00000595226.1_1_19:42461000-42461518:-|nuORF 49.74193281347159 0.1190592179673825 4 [HQ]{I|L}EAVDGEE{I|L} 11 0 + 85.411 0.0 0.0 6.8959 6.8959 91.349 0.0 0.0 0.0 12.244540595578728 72.06663297073699 12.244540595578728 12.874992588081597 0 0.7059771852360797 0.0 0.4247425010840047 0.6382104921644451 + + [HQ]{I|L}EAVDGEE{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]AVDGEE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]AVDGEE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]AVDWE{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]{[RE]|[WV]}WE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]{[RE]|[WV]}GEE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]A[RD]EE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]{[RE]|[WV]}WE{I|L};[C(Carbamidomethyl (C))K]{[WS]|[C(Carbamidomethyl (C)){I|L}]}V{[MS]|[{M(Oxidation (M))|F}A]}[WR] 6.8959;5.8564;4.8276;4.2967;3.2451;2.7437;2.7437;2.2163;0.49387 +;-;-;-;-;-;-;-;- + 255 1 1.648 36924.6 1.0 5368 4635 10004 HBL1_DMSO_200M_050219_2,10005 HBL1_DMSO_200M_050219_2,10005,HQIEAVDGEEL True True HQIEAVDGEEL 54.287592 620.296679675579 268369416.0 10004.0 ENST00000595226.1_1_19:42461000-42461518:-|nuORF;;ENSG00000105404|ENST00000222008|RABAC1 8.333649158477783 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10006 54.289 33.0 1418500.0 25 0 106110.0 43526 WWWWIWWQWW 10 54 874.9041028402406 1747.7936527472812 2 874.9076415896416 MULTI CID FTMS 0 0 0 10004 1713248.875 0.6299961564049912 -5 0.3049507141113281 2 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 4 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 8 53.874 0.0 0.0 3.0824 0.0 0.0 734.3632418395325 0.0 734.3632418395325 0.0 26.706962271689747 0.0 0.0 0 0.9247425010840048 0.0 0.0 1.274227503252014 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.0824 - 105 1 1.648 37613.6 1.0 5369 4635 10004 HBL1_DMSO_200M_050219_2,10006 HBL1_DMSO_200M_050219_2,10006,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 10007 54.29 35.0 1414600.0 25 0 110740.0 + 22086 LPPPTPSQI 9 94 475.27156135390464 948.5285697746092 2 475.2719604372978 MULTI CID FTMS 0 0 0 10004 1526971.25 0.955753551458823 2 -0.2335853576660156 3 Unmodified _LPPPTPSQI_ ENSG00000083223|ENST00000375963|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 54.773552608820026 0.0299037012502309 4 {[HG]|PP}TP{I|L}[PS]Q{I|L} 9 3 + 27.254 0.0 0.0 2.8733 2.8733 76.581 0.0 0.0 0.0 1.9406792894013805 11.769182351515797 1.9406792894013805 12.0597718523608 0 0.9291746928241126 0.0 0.8252574989159953 0.0 {[HG]|PP}TP{I|L}[PS]Q{I|L};{[HG]|PP}TPS[{I|L}P]Q{I|L};[{I|L}P][HN][KQ]{[NV]|[RG]} 2.8733;1.6018;0.818 -;-;- 162 1 1.648 41450.2 1.0 5370 4635 10004 HBL1_DMSO_200M_050219_2,10007 HBL1_DMSO_200M_050219_2,10007,LPPPTPSQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10008 54.292 70.0 1034700.0 25 0 79012.0 + 41782 VPVGRQPII 9 89 489.80858360412606 977.602614275052 2 489.8086120486259 MULTI CID FTMS 0 0 0 10004 859079.0625 0.9681331505713496 2 -0.2335853576660156 4 Unmodified _VPVGRQPII_ ENSG00000131023|ENST00000543571|LATS1;ENST00000441107.5_1_6:149982867-150018260:-|nuORF;ENST00000542747.5_1_6:149997344-150023094:-|nuORF;nc|ENSG00000131023|O95835-2|LATS1 28.486842064014134 0.1687311288560894 4 VPV 3 6 45.93 0.0 0.0 4.6982 0.0 0.0 0.0 679.3910498798967 679.3910498798967 25.03923747131629 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VPV 4.6982 + + 123 + 1 1.648 61000.8 1.0 5371 4635 10004 HBL1_DMSO_200M_050219_2,10008 HBL1_DMSO_200M_050219_2,10008,VPVGRQPII False True VPVGRQPII 54.291615 489.808612048626 13595774.0 10004.0 ENST00000441107.5_1_6:149982867-150018260:-|nuORF;;ENST00000542747.5_1_6:149997344-150023094:-|nuORF;;nc|ENSG00000131023|O95835-2|LATS1;;ENSG00000131023|ENST00000543571|LATS1 2.0152897238731384 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10009 54.295 183.0 596170.0 25 0 112770.0 + 15412 IPPDQQRLI 9 107 540.3146414642733 1078.6147299953466 2 540.3143188357353 MULTI CID FTMS 0 0 0 10004 385295.65625 0.0155796968604838 26 -2.577678680419922 5 Unmodified _IPPDQQRLI_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 22.736283301280096 0.2418982879461534 4 {I|L}PPDQ 5 4 58.36 0.0 0.0 5.4106 0.0 0.0 0.0 525.3153170221311 525.3153170221311 47.25054710168188 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3054621874040891 + {I|L}PPDQ 5.4106 + + 132 + 1 1.648 91877.5 1.0 5372 4635 10004 HBL1_DMSO_200M_050219_2,10009 HBL1_DMSO_200M_050219_2,10009,IPPDQQRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10010 54.307 655.0 184560.0 25 0 15526.0 + 18044 KTAAEDAIRNL 11 140 601.3307492925418 1200.6469456518837 2 601.3308593630791 MULTI CID FTMS 0 0 0 10004 229299.359375 1.0 0 0.0 6 Unmodified _KTAAEDAIRNL_ ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4;nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-4|RBM4 59.17704102725264 0.0724851133754991 4 KTAAEDA{I|L}RVQ 11 2 + 99.875 0.0 0.0 8.3184 8.3184 80.656 0.0 0.0 0.0 16.575773191777927 1.0704930405089923 1.0704930405089923 1.0704930405089923 0 2.504432191740108 0.0 0.3807196863200844 0.8564921830680703 KTAAEDA{I|L}RVQ;KTAAEDA{I|L}RN{I|L};KTAAED{I|L}ARVQ;KTAAED{I|L}ARN{I|L};KTAAEW{I|L}RVQ;KTAAEW{I|L}RN{I|L};KTAAEDA{I|L}RGG{I|L};KTAAED{I|L}ARGG{I|L};KTAAEW{I|L}RGG{I|L};KTA[WE]A{I|L}RVQ 8.3184;8.2293;7.6703;7.5812;7.4797;7.3905;7.1981;6.55;6.3563;6.1427 -;+;-;-;-;-;-;-;-;- + 1721 + 1 1.648 88921.0 1.0 5373 4635 10004 HBL1_DMSO_200M_050219_2,10010 HBL1_DMSO_200M_050219_2,10010,KTAAEDAIRNL True True KTAAEDAIRNL 54.30658 601.330859363079 1503541.0 10004.0 ENSG00000173914|ENST00000310046|RBM4B;;nc|ENSG00000173933|Q9BWF3-4|RBM4;;ENSG00000173933|ENST00000310092|RBM4;;nc|ENSG00000173933|Q9BWF3-3|RBM4;;nc|ENSG00000173933|Q9BWF3-2|RBM4 8.125221093495687 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10011 54.32 800.0 141320.0 25 0 35608.0 -1 0 49 1129.464233432651 3385.370870898153 3 1130.133471667767 MULTI CID FTMS 0 0 0 10004 221931.390625 0.1550723392417622 -3 0.1643791198730468 7 4 E 1 -1 6.9897 0.0 0.0 0.20647 0.0 0.0 2729.1411862344376 524.1614473932249 3253.3026336276625 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20647 - 18 + 1 1.648 99858.8 0.8500000238418579 5374 4635 10004 HBL1_DMSO_200M_050219_2,10011 HBL1_DMSO_200M_050219_2,10011, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10012 54.325 236.0 324400.0 25 0 84543.0 + 43648 YAPSGNFV 8 83 854.4044259258616 853.3971494592615 1 854.4023925662041 MULTI CID FTMS 0 0 0 10004 190752.1875 0.263448039527111 -3 0.1643791198730468 8 Unmodified _YAPSGNFV_ ENSG00000111664|ENST00000229264|GNB3;ENSG00000172354|ENST00000303210|GNB2;ENST00000470354.1_1_7:100275135-100275402:+|nuORF;nc|ENSG00000111664|P16520-2|GNB3;nc|ENSG00000172354|P62879-2|GNB2 78.14939416004806 0.0999748067387998 4 [PS]GN{M(Oxidation (M))|F}S{M(Oxidation (M))|F}V 8 4 + 77.081 0.0 0.0 9.0323 9.0323 96.357 0.0 0.0 0.0 23.97940008672037 51.257374643699336 23.97940008672037 16.020599913279625 0 0.3807196863200844 1.0 0.9876954943324544 1.7302046884880935 [PS]GN{M(Oxidation (M))|F}S{M(Oxidation (M))|F}V;[PS]GNAY{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}GSPS{M(Oxidation (M))|F}V;[PS]GGG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}V;[PS][YQ]N{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NG]PS{M(Oxidation (M))|F}V;[PS]GGGAY{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}G[VG]D{M(Oxidation (M))|F}V;[PS][YQ]GG{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]GN{M(Oxidation (M))|F}V 9.0323;7.155;6.0996;5.9195;4.747;4.6348;4.5399;3.8457;3.6537;3.5563 -;-;-;-;-;-;-;-;-;+ + 565 1 1.648 56227.1 1.0 5375 4635 10004 HBL1_DMSO_200M_050219_2,10012 HBL1_DMSO_200M_050219_2,10012,YAPSGNFV True True YAPSGNFV 54.324894 854.402392566204 7945921.5 10004.0 ENST00000470354.1_1_7:100275135-100275402:+|nuORF;;nc|ENSG00000172354|P62879-2|GNB2;;ENSG00000111664|ENST00000229264|GNB3;;ENSG00000172354|ENST00000303210|GNB2;;nc|ENSG00000111664|P16520-2|GNB3 6.852161248524983 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10013 54.338 740.0 128800.0 25 0 8597.7 + 19906 LHTNSCNRSWM 11 102 674.7977693790176 0 674.7980834841728 PEAK CID FTMS 0 0 0 10004 179479.125 1.0 0 0.0 9 Unmodified _LHTNSCNRSWM_ REV__ENST00000589225.5_1_17:76795102-76795832:-|nuORF 8.155526934196011 0.4672964927559179 4 {I|L}H[HD]D 5 -1 16.242 0.0 0.0 1.2053 0.0 0.0 172.01395450783713 555.3068941705686 727.3208486784058 0.0 0.0 0.0 0.0 0 0.0 0.0 1.305462187404089 0.0 {I|L}H[HD]D 1.2053 - 146 + 1 1.648 72351.3 1.0 5376 4635 10004 HBL1_DMSO_200M_050219_2,10013 HBL1_DMSO_200M_050219_2,10013,LHTNSCNRSWM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10014 54.35 727.0 152260.0 25 0 13895.0 42934 VVSDKTLSFY 10 146 579.8065138407006 1157.5984747482012 2 579.8037597537041 MULTI CID FTMS 0 0 0 10004 176814.28125 0.0923352314141071 9 -0.9425582885742188 10 Unmodified _VVSDKTLSFY_ ENSG00000033050|ENST00000287844|ABCF2;ENST00000465687.1_1_3:88367275-88367665:+|nuORF;nc|ENSG00000285292|Q9UG63-2|ABCF2 20.453626601364224 0.5043500229302764 4 EKCA{I|L}Y 6 8 39.984 0.0 0.0 3.4541 0.0 0.0 432.24922377754064 0.0 432.24922377754064 0.0 10.38486918618936 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 EKCA{I|L}Y 3.4541 - 880 1 1.648 85600.7 1.0 5377 4635 10004 HBL1_DMSO_200M_050219_2,10014 HBL1_DMSO_200M_050219_2,10014,VVSDKTLSFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10015 54.364 745.0 168120.0 25 0 10194.0 -1 QPYYPQHPMV 10 132 638.2948064130358 1274.5750598928714 2 639.2711059451103 MULTI CID FTMS 0 0 0 10004 34159.03515625 0.3266924118947586 -1 0.0474395751953125 11 Oxidation (M) _QPYYPQHPM(Oxidation (M))V_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 10.073929032068715 0.6785112666868882 4 {M(Oxidation (M))|F}EG 3 -1 18.416 0.0 0.0 1.4449 0.0 0.0 111.13337463404226 827.304254732547 938.4376293665892 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {M(Oxidation (M))|F}EG 1.4449 - 1152 + 1 1.648 94096.3 1.0 5378 4635 10004 HBL1_DMSO_200M_050219_2,10015 HBL1_DMSO_200M_050219_2,10015,QPYYPQHPMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10017 54.369 30.0 1292100.0 25 0 108260.0 + 3272 AYHELAQVY 9 60 547.2694878370107 1092.5244227408214 2 547.2698852419853 MULTI CID FTMS 0 0 0 10016 1461941.75 0.0904657463668851 5 -0.5310897827148438 1 Unmodified _AYHELAQVY_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 20.453626601364224 0.2830276176381075 4 E{I|L}AQVY 6 3 41.599 0.0 0.0 3.8076 0.0 0.0 371.1602955548844 0.0 371.1602955548844 0.0 24.60917821584665 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.4247425010840047 + E{I|L}AQVY 3.8076 + + 35 1 1.641 39936.8 1.0 5379 4636 10016 HBL1_DMSO_200M_050219_2,10017 HBL1_DMSO_200M_050219_2,10017,AYHELAQVY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10018 54.37 32.0 1885900.0 25 0 200250.0 + 16772 KGAKAGII 8 77 379.2505089148608 756.4864648965216 2 379.2504150271416 MULTI CID FTMS 0 0 0 10016 1613177.375 0.4037873681264824 3 -0.3247604370117187 2 Unmodified _KGAKAGII_ REV__ENSG00000168916|ENST00000513986|ZNF608;REV__nc|ENSG00000168916|Q9ULD9-2|ZNF608 5.230669730166228 0.792582437072536 4 DK{I|L}R{I|L}{I|L} 6 -1 + 40.009 0.0 0.0 5.2888 5.2888 87.636 0.0 0.0 0.0 27.534568485392448 6.370090806403468 6.370090806403468 40.00881859379292 0 0.8633643341304672 0.0 0.0 0.5 DK{I|L}R{I|L}{I|L} 5.2888 - 53 + 1 1.641 55114.4 1.0 5380 4636 10016 HBL1_DMSO_200M_050219_2,10018 HBL1_DMSO_200M_050219_2,10018,KGAKAGII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10019 54.371 46.0 1440400.0 25 0 158760.0 + 22050 LPPPPPPHL 9 70 482.78449894353474 963.5544449538696 2 482.7845031619072 MULTI CID FTMS 0 0 0 10016 1154398.0 0.5980284040672115 -4 0.2455101013183593 3 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 56.04830969593885 0.0282699710924866 4 {I|L}PPPPPP[H{I|L}] 9 0 + 79.104 0.0 0.0 8.2096 8.2096 96.09 0.0 0.0 0.0 68.13486257521106 4.137342758552691 4.137342758552691 22.21848749616356 0 0.75 2.0 0.0 0.0 + + {I|L}PPPPPP[H{I|L}];{I|L}PPP[YK][H{I|L}];{I|L}PP[YK]P[H{I|L}];{I|L}PPP[W{I|L}]{[QN]|[E{I|L}]|[KN]};{I|L}P[YK]PP[H{I|L}];{I|L}[YK]PPP[H{I|L}];{I|L}[YK][YK][H{I|L}];{I|L}[YK][W{I|L}]{[QN]|[E{I|L}]|[KN]} 8.2096;5.9037;5.9037;5.8031;5.5662;3.0497;0.75091;0.65033 +;-;-;-;-;-;-;- + 144 + 1 1.641 57017.0 1.0 5381 4636 10016 HBL1_DMSO_200M_050219_2,10019 HBL1_DMSO_200M_050219_2,10019,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10020 54.373 59.0 1490200.0 25 0 253030.0 + 36145 SVVDHFNRI 9 79 362.8614122019854 1085.5624072061562 3 362.8611938357353 MULTI CID FTMS 0 0 0 10016 1105903.375 0.1104070287102324 -2 0.128570556640625 4 Unmodified _SVVDHFNRI_ ENSG00000103035|ENST00000219313|PSMD7;ENST00000422197.2_1_1:51837944-51838202:+|nuORF;ENST00000566015.1_1_16:74330767-74334139:+|nuORF 41.8396318013385 0.0653578398400075 4 [VS]VDH{M(Oxidation (M))|F}N[R{I|L}] 9 0 + 71.717 0.0 0.0 6.6064 6.6064 76.578 0.0 0.0 0.0 14.902180059595407 1.249387366082999 1.249387366082999 1.249387366082999 0 0.4247425010840047 2.0 0.7742275032520141 0.2614393726401688 + + [VS]VDH{M(Oxidation (M))|F}N[R{I|L}];[VS]VDH{M(Oxidation (M))|F}{I|L}[RN];[VS]VDH{I|L}{M(Oxidation (M))|F}[RN];[VS]V{I|L}DH{M(Oxidation (M))|F}[RN];[VS]VDH{M(Oxidation (M))|F}GG[R{I|L}];[VS]VD{I|L}H{M(Oxidation (M))|F}[RN];[VS]{I|L}VDH{M(Oxidation (M))|F}[RN];[DV]V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D{I|L}V[PA];[VS]V{I|L}D{[MG]|[TS]}[KT]H;[DV]V{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}DV[PA] 6.6064;6.4914;5.9732;5.7693;5.7582;5.6959;5.5208;3.8119;3.7405;3.7385 +;-;-;-;-;-;-;-;-;- + 294 + 1 1.641 76908.5 1.0 5382 4636 10016 HBL1_DMSO_200M_050219_2,10020 HBL1_DMSO_200M_050219_2,10020,SVVDHFNRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10021 54.374 44.0 916740.0 25 0 130440.0 + 19464 LFFLDMVI 8 72 499.2730172419994 996.5314815507988 2 499.2729369997978 MULTI CID FTMS 0 0 0 10016 984527.25 0.472673636589448 -3 0.1885871887207031 5 Unmodified _LFFLDMVI_ REV__ENST00000366558.7_1_1:241695491-241695605:+|nuORF 26.34127834903884 0.4900704351052977 4 [DP][TP]KPMV{I|L} 9 -1 + 44.364 0.0 0.0 4.4518 4.4518 80.589 0.0 0.0 0.0 8.57386545501626 33.879034430739026 8.57386545501626 9.992822134202008 0 0.9247425010840048 0.0 1.305462187404089 0.0 [DP][TP]KPMV{I|L};[KP]M[DP][TP]V{I|L};[DP][TP]KPVM{I|L};{[VA]|[{I|L}G]}W[DP][TP]V{I|L};{[VA]|[{I|L}G]}[HC]KPMV{I|L};{[VA]|[{I|L}G]}[HC]KPVM{I|L} 4.4518;3.449;3.049;2.5709;2.5658;1.6647 -;-;-;-;-;- 85 1 1.641 36578.6 1.0 5383 4636 10016 HBL1_DMSO_200M_050219_2,10021 HBL1_DMSO_200M_050219_2,10021,LFFLDMVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10022 54.375 60.0 549840.0 25 0 48569.0 -1 LPEICTQCP 9 74 530.7435245140377 1059.4724960948754 2 530.7435790896416 MULTI CID FTMS 0 0 0 10016 829584.875 0.841649873331084 1 -0.1524543762207031 6 Carbamidomethyl (C) _LPEIC(Carbamidomethyl (C))TQCP_ ENSG00000138085|ENST00000380171|ATRAID;ENST00000484646.1_1_2:27435071-27436167:+|nuORF;nc|ENSG00000138085|Q6UW56-3|ATRAID 20.453626601364224 0.2830276176381075 4 [{I|L}P]EPGN{I|L} 7 -1 49.257 0.0 0.0 4.6492 0.0 0.0 0.0 336.0684182963004 336.0684182963004 34.65304783738418 0.0 0.0 0.0 0 1.0 2.0 0.0 0.3807196863200844 [{I|L}P]EPGN{I|L} 4.6492 - 241 1 1.641 33055.7 1.0 5384 4636 10016 HBL1_DMSO_200M_050219_2,10022 HBL1_DMSO_200M_050219_2,10022,LPEICTQCP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10023 54.377 78.0 753530.0 25 0 45380.0 + 21529 LPIQPAQHI 9 96 508.79866261972205 1015.582772306244 2 508.7983581423759 MULTI CID FTMS 0 0 0 10016 816989.5 0.8075521927158622 2 -0.1943778991699218 7 Unmodified _LPIQPAQHI_ ENSG00000116044|ENST00000397062|NFE2L2;ENST00000462023.1_1_2:178098693-178129304:-|nuORF;ENST00000477534.1_1_2:178098693-178128139:-|nuORF;nc|ENSG00000116044|Q16236-2|NFE2L2;nc|ENSG00000116044|Q16236-3|NFE2L2 74.42276476219924 0.019389277360085 4 {I|L}P{I|L}Q{I|L}NDH 8 4 83.134 0.0 0.0 8.1858 0.0 0.0 0.0 82.06700311832265 82.06700311832265 64.20609411981054 0.0 0.0 0.0 0 1.2302046884880935 2.0 1.305462187404089 0.8494850021680094 {I|L}P{I|L}Q{I|L}NDH 8.1858 - 492 + 1 1.641 53357.6 1.0 5385 4636 10016 HBL1_DMSO_200M_050219_2,10023 HBL1_DMSO_200M_050219_2,10023,LPIQPAQHI True True LPIQPAQHI 54.377181 508.798358142376 17682050.0 10016.0 nc|ENSG00000116044|Q16236-3|NFE2L2;;nc|ENSG00000116044|Q16236-2|NFE2L2;;ENSG00000116044|ENST00000397062|NFE2L2;;ENST00000462023.1_1_2:178098693-178129304:-|nuORF;;ENST00000477534.1_1_2:178098693-178128139:-|nuORF 5.917966524759929 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10024 54.379 89.0 650740.0 25 0 45972.0 + 5889 DPYKVYRI 8 87 527.2900540911855 1052.565555249171 2 527.2903930544853 MULTI CID FTMS 0 0 0 10016 499043.65625 0.0813045015292951 5 -0.5310897827148438 8 Unmodified _DPYKVYRI_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 21.74664581756881 0.5868176546531598 4 DPYKV 5 3 53.984 0.0 0.0 5.1288 0.0 0.0 0.0 447.2379337667244 447.2379337667244 30.42796583575644 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + DPYKV 5.1288 + + 175 + 1 1.641 52458.2 1.0 5386 4636 10016 HBL1_DMSO_200M_050219_2,10024 HBL1_DMSO_200M_050219_2,10024,DPYKVYRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10025 54.381 111.0 880020.0 25 0 86973.0 + 21310 LPEPVLRKV 9 93 350.89411239153674 1049.6605077748102 3 350.8937255740166 MULTI CID FTMS 0 0 0 10016 438880.03125 0.6065274894074842 2 -0.1943778991699218 9 Unmodified _LPEPVLRKV_ ENSG00000105364|ENST00000253099|MRPL4;ENST00000588963.1_1_19:10363075-10363378:+|nuORF;ENST00000592071.1_1_19:10363204-10365325:+|nuORF;nc|ENSG00000105364|Q9BYD3-2|MRPL4 26.020703789607367 0.2001090068861241 4 {I|L}PEPV{I|L} 6 3 53.721 0.0 0.0 5.1179 0.0 0.0 0.0 398.2533358209594 398.2533358209594 26.211375162600703 0.0 0.0 0.0 0 0.2302046884880938 1.154901959985743 0.5 0.0 + {I|L}PEPV{I|L} 5.1179 + + 91 + 1 1.641 92144.7 1.0 5387 4636 10016 HBL1_DMSO_200M_050219_2,10025 HBL1_DMSO_200M_050219_2,10025,LPEPVLRKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10026 54.384 146.0 427520.0 25 0 79296.0 + + 27906 SPIRVNAL 8 97 435.7733488325226 869.5321447318453 2 435.7748290896416 MULTI CID FTMS 0 0 0 10016 371219.875 0.4501338536918973 -6 0.3860816955566406 10 Unmodified _PLSRTLAL_ nc|ENSG00000163638|Q9P2N4-1|ADAMTS9;ENSG00000163638|ENST00000498707|ADAMTS9;nc|ENSG00000163638|Q9P2N4-2|ADAMTS9;nc|ENSG00000163638|Q9P2N4-4|ADAMTS9;ENST00000475557.5_1_3:64600969-64673333:-|nuORF 34.40172386719151 0.3279500639400574 4 [{I|L}P]SRT{I|L}A{I|L} 8 -1 + 53.515 0.0 0.0 6.1545 6.1545 74.775 0.0 0.0 0.0 8.738890812737807 16.37054310226702 8.738890812737807 1.2371250542002343 0 1.3494850021680094 2.0 0.0 0.0 [{I|L}P]SRT{I|L}A{I|L};[{I|L}P]SRTA{I|L}{I|L};[PS]{I|L}RT{I|L}A{I|L};[PS]{I|L}RTA{I|L}{I|L};[VG][KA][QA]{I|L}A{I|L};[VG][KA][QA]A{I|L}{I|L} 6.1545;6.0122;4.4294;4.2871;1.554;1.4117 +;-;-;-;-;- + 145 1 1.641 53224.4 1.0 5388 4636 10016 HBL1_DMSO_200M_050219_2,10026 HBL1_DMSO_200M_050219_2,10026,PLSRTLAL False False SPIRVNAL 54.384394 435.774829089642 2143836.0 10016.0 nc|ENSG00000163638|Q9P2N4-1|ADAMTS9;;ENSG00000163638|ENST00000498707|ADAMTS9;;nc|ENSG00000163638|Q9P2N4-2|ADAMTS9;;nc|ENSG00000163638|Q9P2N4-4|ADAMTS9;;ENST00000475557.5_1_3:64600969-64673333:-|nuORF -0.0419634977976481 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10027 54.396 654.0 283930.0 25 0 29103.0 + 10805 AYYAPGYTQTSY 12 144 692.806364406984 1383.598175880768 2 692.8066284060478 MULTI CID FTMS 0 0 0 10016 272756.6875 0.4067742280357322 -1 0.0811309814453125 11 Unmodified _FYSTQFENVSY_ ENSG00000156735|ENST00000287322|BAG4;nc|ENSG00000156735|O95429-2|BAG4 15.248480904072842 0.7179608125786238 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS][NP]SAQA 10 9 66.801 0.0 0.0 4.828 0.0 0.0 0.0 394.1411435603422 394.1411435603422 29.56064000424 0.0 0.0 0.0 0 1.0 1.6989700043360187 1.805462187404089 0.6861818737241735 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS][NP]SAQA 4.828 - 12576 1 1.641 131948.3 1.0 5389 4636 10016 HBL1_DMSO_200M_050219_2,10027 HBL1_DMSO_200M_050219_2,10027,FYSTQFENVSY False False AYYAPGYTQTSY 54.395804 692.806628406048 12323696.0 10016.0 ENSG00000156735|ENST00000287322|BAG4;;nc|ENSG00000156735|O95429-2|BAG4 8.953974882761637 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10028 54.407 640.0 271960.0 25 0 24950.0 + 29791 QPYYPQHPMV 10 134 638.2948064130358 1274.5750598928714 2 638.2956420779228 MULTI CID FTMS 0 0 0 10016 264811.15625 1.0 0 0.0 12 Oxidation (M) _QPYYPQHPM(Oxidation (M))V_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 43.85829265575387 0.1168243637355526 4 [QP]YY[QP]HPE 9 2 43.186 0.0 0.0 3.3883 0.0 0.0 0.0 132.0459383600219 132.0459383600219 21.77614740346283 0.0 0.0 0.0 0 1.0774509799928715 0.5228787452803376 0.7059771852360797 0.0 [QP]YY[QP]HPE 3.3883 - 1917 + 1 1.641 129789.4 1.0 5390 4636 10016 HBL1_DMSO_200M_050219_2,10028 HBL1_DMSO_200M_050219_2,10028,QPYYPQHPMV True False QPYYPQHPMV 54.406965 638.295642077923 3323739.0 10016.0 nc|ENSG00000101096|Q13469|NFATC2;;nc|ENSG00000101096|Q13469-5|NFATC2;;nc|ENSG00000101096|Q13469-4|NFATC2;;ENSG00000101096|ENST00000371564|NFATC2;;nc|ENSG00000101096|Q13469-3|NFATC2 6.667987028757731 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10029 54.421 800.0 295340.0 25 0 30400.0 + 6574 EALVARAI 8 192 421.7585341868952 841.5025154405904 2 421.7583495974541 MULTI CID FTMS 0 0 0 10016 232460.953125 1.0 0 0.0 13 Unmodified _EALVARAI_ ENSG00000144028|ENST00000323853|SNRNP200 44.40701690623563 0.1655546087385432 4 {[CP]|[EA]}{I|L}VARA{I|L} 8 0 + 36.946 0.0 0.0 4.3904 4.3904 77.913 0.0 0.0 0.0 24.47142851838663 7.546868243826566 7.546868243826566 9.030899869919438 0 0.7134679910804405 0.0 0.0 0.0 + + {[CP]|[EA]}{I|L}VARA{I|L};{[CP]|[EA]}{I|L}{I|L}GRA{I|L} 4.3904;3.3173 +;- + 267 + 1 1.641 183393.4 0.9900000095367432 5391 4636 10016 HBL1_DMSO_200M_050219_2,10029 HBL1_DMSO_200M_050219_2,10029,EALVARAI False True EALVARAI 54.420779 421.758349597454 2740052.75 10016.0 ENSG00000144028|ENST00000323853|SNRNP200 2.3192991813023887 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10030 54.433 689.0 257010.0 25 0 19857.0 + 45842 YYPTSSSTSF 10 183 570.2485734316576 1138.4825939301152 2 570.2484619021416 MULTI CID FTMS 0 0 0 10016 217401.796875 0.3076818956034333 -4 0.2455101013183593 14 Unmodified _YYPTSSSTSF_ ENSG00000102119|ENST00000369842|EMD;ENST00000471965.1_1_X:153609106-153609554:+|nuORF 52.268347100219714 0.0668375294751462 4 YY[C(Carbamidomethyl (C))K]TGNS{M(Oxidation (M))|F} 9 6 + 56.603 0.0 0.0 4.9718 4.9718 82.656 0.0 0.0 0.0 23.90658544798997 9.087732295845058 9.087732295845058 10.21652514092061 0 0.7429928190999391 2.0 0.6307196863200843 0.2742275032520141 YY[C(Carbamidomethyl (C))K]TGNS{M(Oxidation (M))|F};YY[C(Carbamidomethyl (C))K]TS[NG]{M(Oxidation (M))|F};YY[C(Carbamidomethyl (C))K][NG]TS{M(Oxidation (M))|F};YY[C(Carbamidomethyl (C))K]TGNAY;YY[C(Carbamidomethyl (C))R]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F};[C(Carbamidomethyl (C))K]YYTGNS{M(Oxidation (M))|F};YY[C(Carbamidomethyl (C))K][NG]TAY;YY[C(Carbamidomethyl (C))K]Y{M(Oxidation (M))|F}VP;YY[C(Carbamidomethyl (C))K]Y{M(Oxidation (M))|F}PV;[C(Carbamidomethyl (C))K]YYTS[NG]{M(Oxidation (M))|F} 4.9718;4.0744;3.5034;3.3697;3.0229;2.4229;1.9013;1.6028;1.5474;1.5255 -;-;-;-;-;-;-;-;-;- 3165 + 1 1.641 133346.2 1.0 5392 4636 10016 HBL1_DMSO_200M_050219_2,10030 HBL1_DMSO_200M_050219_2,10030,YYPTSSSTSF True True YYPTSSSTSF 54.432769 570.248461902142 39125364.0 10016.0 ENSG00000102119|ENST00000369842|EMD;;ENST00000471965.1_1_X:153609106-153609554:+|nuORF 6.762518723805745 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10031 54.445 709.0 80520.0 25 0 3852.1 + + -1 LSASPDCHGPGDGPG 15 108 683.7854305783219 1365.5563082234437 2 683.7869140505791 MULTI CID FTMS 0 0 0 10016 218188.84375 0.4008957110279748 3 -0.3247604370117187 15 2 Carbamidomethyl (C) _SLC(Carbamidomethyl (C))LSSC(Carbamidomethyl (C))TFYE_ ENST00000427358.3_1_16:1876946-1877183:+|nuORF 5.731851221503515 0.8481046878870278 4 {[TV]|[{I|L}S]}A 3 -1 31.505 0.0 0.0 2.3071 0.0 0.0 0.0 1091.379342241275 1091.379342241275 17.749656997539887 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.805462187404089 0.0 {[TV]|[{I|L}S]}A 2.3071 - 586 1 1.641 45773.9 1.0 5393 4636 10016 HBL1_DMSO_200M_050219_2,10031 HBL1_DMSO_200M_050219_2,10031,SLCLSSCTFYE False False LSASPDCHGPGDGPG 54.445083 683.786914050579 3915715.0 10016.0 ENST00000427358.3_1_16:1876946-1877183:+|nuORF 0.2525327205657959 2.0 False 15.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10032 54.46 800.0 222840.0 25 0 20048.0 + 2425 AQQQTQLNL 9 202 522.2770650279267 1042.539577122653 2 522.2775146365166 MULTI CID FTMS 0 0 0 10016 153949.0 0.8941169466971145 -2 0.128570556640625 16 Unmodified _AQQQTQLNL_ ENSG00000169710|ENST00000306749|FASN 43.85829265575387 0.0542763391141878 4 {[QS]|[NT]}{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]}PN{I|L} 9 5 + 38.042 0.0 0.0 3.6489 3.6489 71.385 0.0 0.0 0.0 0.0 4.771212547196626 0.0 4.771212547196626 0 0.0 0.0 0.75 0.7742275032520141 {[QS]|[NT]}{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]}PN{I|L};{[QS]|[NT]}{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]}PQV;[KS]{I|L}{[SA]|[TG]}TQA[HT];{[QS]|[NT]}{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}N;[KS]{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]}PGG{I|L};[KS]{I|L}WWPN{I|L};{[QS]|[NT]}{I|L}E[{I|L}P]EEV;[KS]{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]}P[AG]V;[KS]{I|L}{[SA]|[TG]}NW[HT];[VP]MQTDPKK 3.6489;3.1913;2.4426;2.4224;2.3583;2.3082;2.0231;1.9006;1.892;1.8832 -;-;-;-;-;-;-;-;-;- 4222 + 1 1.641 138291.5 0.8899999856948853 5394 4636 10016 HBL1_DMSO_200M_050219_2,10032 HBL1_DMSO_200M_050219_2,10032,AQQQTQLNL True True AQQQTQLNL 54.460383 522.277514636517 2230240.0 10016.0 ENSG00000169710|ENST00000306749|FASN 3.742174784342448 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10033 54.474 800.0 407230.0 25 0 52149.0 29495 QLLALTPLH 9 235 503.3061652374182 0 503.3061096072197 PEAK CID FTMS 0 0 0 10016 149430.921875 0.6745627986080429 2 -0.1943778991699218 17 Unmodified _QLLALTPLH_ ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1 7.289230182591677 0.3433663536648894 4 NQD{I|L} 4 8 9.9666 0.0 0.0 0.9921 0.0 0.0 129.1851931683927 402.1538790338501 531.3390722022427 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.25 NQD{I|L} 0.9921 - 300 + 1 1.641 243143.1 0.8899999856948853 5395 4636 10016 HBL1_DMSO_200M_050219_2,10033 HBL1_DMSO_200M_050219_2,10033,QLLALTPLH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10034 54.489 800.0 444300.0 25 0 30899.0 15864 ISNTVSSHL 9 239 479.2516203073572 956.4886876815144 2 479.2520019412041 MULTI CID FTMS 0 0 0 10016 110793.7109375 0.7430861202827853 -1 0.0811309814453125 18 Unmodified _ISNTVSSHL_ ENST00000284116.8_1_17:57322893-57334524:+|nuORF 20.453626601364224 0.2830276176381075 4 [DV]APDSVRV 9 8 + 39.06 0.0 0.0 4.0836 4.0836 70.443 0.0 0.0 0.0 9.233814972204122 12.033800393248242 9.233814972204122 3.203351508593677 0 0.0 1.6989700043360187 0.0 0.3054621874040891 [DV]APDSVRV;{[DA]|[EG]}VPDSVRV;[DV]APD[Q{I|L}]S{I|L};[DV]APD[Q{I|L}]TV;{[DA]|[EG]}VPD[Q{I|L}]S{I|L};[VS]QT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}T;{[DA]|[EG]}[NG]GVAVRV;[DV]APD[RV]SV;{[DA]|[EG]}VPD[Q{I|L}]TV;{[QS]|[NT]}VT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}T 4.0836;3.7487;2.7197;2.4444;2.3848;2.2844;2.2826;2.1892;2.1095;2.0618 -;-;-;-;-;-;-;-;-;- 1671 + 1 1.641 266667.8 0.7699999809265137 5396 4636 10016 HBL1_DMSO_200M_050219_2,10034 HBL1_DMSO_200M_050219_2,10034,ISNTVSSHL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10035 54.503 800.0 131620.0 25 0 9359.5 45480 YTLKGERTV 9 171 533.7995752524807 0 533.7925903201103 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _YTLKGERTV_ ENSG00000101955|ENST00000378533|SRPX;nc|ENSG00000101955|P78539-2|SRPX;nc|ENSG00000101955|P78539-4|SRPX;nc|ENSG00000101955|P78539-5|SRPX 19.256988751693697 0.2078072434435185 4 DGSV 4 7 21.216 0.0 0.0 1.9911 0.0 0.0 128.18367091336137 576.2258394830686 704.40951039643 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 DGSV 1.9911 - 105 + 1 1.641 88813.3 0.699999988079071 5397 4636 10016 HBL1_DMSO_200M_050219_2,10035 HBL1_DMSO_200M_050219_2,10035,YTLKGERTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10036 54.517 800.0 272240.0 25 0 30609.0 + 23640 LTQPTYRGT 9 266 346.18594768614844 0 346.1862975955009 PEAK CID FTMS 0 0 0 10016 93887.765625 0.7544975526111383 14 -1.3439407348632812 20 Unmodified _LTQPTYRGT_ REV__ENSG00000139718|ENST00000604567|SETD1B;REV__nc|ENSG00000139718|Q9UPS6-2|SETD1B;REV__SETD1B|p.S425Wfs*16|1|0.22|ENSG00000139718|chr12:121810218-121810219|AG/-|frameshift_variant 11.640296217721598 0.2934555500198502 4 E 1 -1 4.2082 0.0 0.0 0.60957 0.0 0.0 476.2253671967125 82.06698023013905 558.2923474268516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1109243748081781 0.0 E 0.60957 - 22 + 1 1.641 170067.0 0.5299999713897705 5398 4636 10016 HBL1_DMSO_200M_050219_2,10036 HBL1_DMSO_200M_050219_2,10036,LTQPTYRGT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10038 54.521 3.4 14262000.0 25 0 2143200.0 + 28607 PVDKPGPSI 9 78 455.2555885603596 908.4966241875192 2 455.2559692263603 MULTI CID FTMS 0 0 0 10037 15437508.0 0.8387834806874788 1 -0.0419235229492187 1 Unmodified _PVDKPGPSI_ REV__ENSG00000076356|ENST00000367033|PLXNA2 74.42276476219924 0.019389277360085 4 [{I|L}T]TGP 5 -1 39.27 0.0 0.0 4.3225 0.0 0.0 0.0 436.22020141824106 436.22020141824106 19.599213422898867 0.0 0.0 0.0 0 0.7134679910804405 1.6989700043360187 0.9291746928241126 0.0 [{I|L}T]TGP 4.3225 - 284 1 1.635 40827.8 1.0 5399 4637 10037 HBL1_DMSO_200M_050219_2,10038 HBL1_DMSO_200M_050219_2,10038,PVDKPGPSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10039 54.522 8.2 6455200.0 25 0 1493100.0 + 10089 FPSHLNQLF 9 83 368.19447723393614 1101.5616023020084 3 368.1942321658134 MULTI CID FTMS 0 0 0 10037 6251023.0 0.64818030607146 16 -1.5126914978027344 2 Unmodified _FPSHLNQLF_ REV__ENSG00000148600|ENST00000623527|CDHR1;REV__nc|ENSG00000148600|Q96JP9-2|CDHR1 14.40537977576856 0.4467465336100671 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[QA]{M(Oxidation (M))|F}E 7 -1 14.735 0.0 0.0 1.3377 0.0 0.0 0.0 292.1644938702829 292.1644938702829 0.1313872970995433 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[QA]{M(Oxidation (M))|F}E 1.3377 - 128 1 1.635 49013.2 1.0 5400 4637 10037 HBL1_DMSO_200M_050219_2,10039 HBL1_DMSO_200M_050219_2,10039,FPSHLNQLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10040 54.524 8.7 6342400.0 25 0 785440.0 + 4169 DAPHPPLKI 9 73 494.2848575762056 986.5551622192112 2 494.2849609255791 MULTI CID FTMS 0 0 0 10037 5788575.5 0.1568033112656691 -5 0.3979644775390625 3 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 62.57269311338072 0.0246576765497938 4 {[DA]|[EG]}PHPP{I|L}K{I|L} 9 0 + 66.648 0.0 0.0 6.7556 6.7556 92.662 0.0 0.0 0.0 45.67873219674858 12.252684618815088 12.252684618815088 23.95242492728684 0 2.075257498915996 1.6989700043360187 0.0 0.2742275032520141 + + {[DA]|[EG]}PHPP{I|L}K{I|L};{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]PP{I|L}K{I|L};W{I|L}{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}K{I|L};{I|L}W{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}K{I|L};W{I|L}[WE]{I|L}K{I|L};{I|L}W[WE]{I|L}K{I|L} 6.7556;4.3277;3.8455;3.5158;3.4737;3.144 +;-;-;-;-;- + 149 + 1 1.635 52754.2 1.0 5401 4637 10037 HBL1_DMSO_200M_050219_2,10040 HBL1_DMSO_200M_050219_2,10040,DAPHPPLKI True True DAPHPPLKI 54.523537 494.284960925579 5351078208.0 10037.0 ENSG00000104904|ENST00000602676|OAZ1 6.712843577067058 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10041 54.525 8.9 8800000.0 25 0 979290.0 + 4163 DAPHPPLKI 9 89 329.85914441787924 986.5556038538376 3 329.8589355349541 MULTI CID FTMS 0 0 0 10037 5698193.5 0.1489137790796678 -5 0.3979644775390625 4 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 14.838274106304384 0.4350285940865338 4 {I|L}H[HQ] 4 8 14.693 0.0 0.0 1.4893 0.0 0.0 453.2959156720719 0.0 453.2959156720719 0.0 3.433677739595033 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}H[HQ] 1.4893 - 59 1 1.635 66759.9 1.0 5402 4637 10037 HBL1_DMSO_200M_050219_2,10041 HBL1_DMSO_200M_050219_2,10041,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10042 54.526 13.0 4563500.0 25 0 672010.0 + 21639 LPLDRLNP 8 53 469.27679076482383 936.5390285964476 2 469.2772094607353 MULTI CID FTMS 0 0 0 10037 4664982.5 0.5230841313059346 13 -1.191486358642578 5 Unmodified _LPLDRLNP_ REV__ENSG00000182704|ENST00000333090|TSKU 15.847184025352805 0.6768015514314958 4 {I|L}PPEKG 6 -1 63.889 0.0 0.0 6.8218 0.0 0.0 0.0 312.15705286197505 312.15705286197505 56.89896278884483 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPEKG 6.8218 - 52 + 1 1.635 52043.7 1.0 5403 4637 10037 HBL1_DMSO_200M_050219_2,10042 HBL1_DMSO_200M_050219_2,10042,LPLDRLNP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10043 54.527 12.0 4746400.0 25 0 574390.0 + 36148 SVVDHFNRI 9 71 543.7881596847484 1085.5617664362967 2 543.7885619997978 MULTI CID FTMS 0 0 0 10037 4304277.5 0.7771017993693676 -1 0.1524543762207031 6 Unmodified _SVVDHFNRI_ ENSG00000103035|ENST00000219313|PSMD7;ENST00000422197.2_1_1:51837944-51838202:+|nuORF;ENST00000566015.1_1_16:74330767-74334139:+|nuORF 26.268140514670165 0.1969607489560049 4 [VS]VDH{M(Oxidation (M))|F} 6 3 59.966 0.0 0.0 5.5239 0.0 0.0 0.0 398.21711145572505 398.21711145572505 22.589537077308115 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.0 0.0 + [VS]VDH{M(Oxidation (M))|F} 5.5239 + + 114 + 1 1.635 50472.5 1.0 5404 4637 10037 HBL1_DMSO_200M_050219_2,10043 HBL1_DMSO_200M_050219_2,10043,SVVDHFNRI False True SVVDHFNRI 54.527072 543.788561999798 255243080.0 10037.0 ENST00000422197.2_1_1:51837944-51838202:+|nuORF;;ENST00000566015.1_1_16:74330767-74334139:+|nuORF;;ENSG00000103035|ENST00000219313|PSMD7 5.6019307772318525 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10044 54.528 18.0 2851400.0 25 0 328940.0 + 4572 DAYRPVGL 8 80 445.7399106781619 889.4652684231238 2 445.7404968142509 MULTI CID FTMS 0 0 0 10037 3006897.75 0.4924547616524704 1 -0.0419235229492187 7 Unmodified _DAYRPVGL_ ENSG00000179094|ENST00000317276|PER1;nc|ENSG00000179094|O15534-4|PER1 37.97399986684836 0.2681860861828418 4 {[DA]|[EG]}YR[VP]G{I|L} 8 0 + 61.164 0.0 0.0 6.8765 6.8765 90.958 0.0 0.0 0.0 40.91805264274505 14.024174299985006 14.024174299985006 12.028937514676484 0 1.6549471895720984 2.0 0.0 0.0 + + {[DA]|[EG]}YR[VP]G{I|L};{[DA]|[EG]}K[KQ]MG{I|L};{[DA]|[EG]}K[KG]AMG{I|L};{[DA]|[EG]}{I|L}{I|L}SAMG{I|L};WY[VG][VP]G{I|L};{[DA]|[EG]}K[KG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};{[DA]|[EG]}{I|L}{I|L}S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};{[SA]|[TG]}{I|L}{I|L}R[DC]{I|L};[YR]AD[VP]G{I|L};{[VA]|[{I|L}G]}[{I|L}T]R[DC]{I|L} 6.8765;5.5241;5.4666;5.1281;4.6279;3.7539;3.4154;3.072;2.9128;2.7543 +;-;-;-;-;-;-;-;-;- + 320 + 1 1.635 48190.5 1.0 5405 4637 10037 HBL1_DMSO_200M_050219_2,10044 HBL1_DMSO_200M_050219_2,10044,DAYRPVGL False True DAYRPVGL 54.528251 445.740496814251 97590504.0 10037.0 nc|ENSG00000179094|O15534-4|PER1;;ENSG00000179094|ENST00000317276|PER1 6.239232381184896 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10045 54.529 19.0 2554400.0 25 0 278930.0 + 9955 FPGKHFQEI 9 78 551.7875691100098 1101.5605852868196 2 551.7878906130791 MULTI CID FTMS 0 0 0 10037 2915005.5 0.6224293874943388 16 -1.5126914978027344 8 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 43.9818466556824 0.0535980856389242 4 {M(Oxidation (M))|F}{I|L}Q{M(Oxidation (M))|F}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 6 + 38.109 0.0 0.0 3.4596 3.4596 73.356 0.0 0.0 0.0 7.07325943207756 7.07325943207756 7.07325943207756 7.07325943207756 0 0.0 0.0 0.9247425010840048 0.4247425010840047 {M(Oxidation (M))|F}{I|L}Q{M(Oxidation (M))|F}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KG]P{M(Oxidation (M))|F}H{M(Oxidation (M))|F}Q{I|L}E;{M(Oxidation (M))|F}{I|L}[AG]{M(Oxidation (M))|F}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}P[SG]{M(Oxidation (M))|F}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KG]PW{[CT]|[{M(Oxidation (M))|F}G]}[KG]PE;[KG]P{M(Oxidation (M))|F}H{M(Oxidation (M))|F}[AG]{I|L}E;{M(Oxidation (M))|F}P[YK][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[WP][KG]PE;[KG]P{M(Oxidation (M))|F}H[YK]PE;[KG]P[TA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Q{I|L}E 3.4596;2.8174;2.6187;2.2823;2.015;1.9815;1.9675;1.8359;1.7793;1.6451 -;-;-;-;-;-;-;-;-;- 259 + 1 1.635 42694.9 1.0 5406 4637 10037 HBL1_DMSO_200M_050219_2,10045 HBL1_DMSO_200M_050219_2,10045,FPGKHFQEI True True FPGKHFQEI 54.52943 551.787890613079 517941552.0 10037.0 ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 6.26933495203654 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10046 54.531 31.0 1408300.0 25 0 75328.0 + 30655 RFPDGTNGL 9 90 488.7464410504657 975.4783291677312 2 488.7463561892509 MULTI CID FTMS 0 0 0 10037 1536534.5 1.0 0 0.0 9 Unmodified _RFPDGTNGL_ ENSG00000164442|ENST00000367651|CITED2;nc|ENSG00000164442|Q99967-2|CITED2 27.628801355627647 0.1796483985696185 4 [R{M(Oxidation (M))|F}][DP]GTN{[VA]|[{I|L}G]} 9 0 + 31.628 0.0 0.0 3.2424 3.2424 76.081 0.0 0.0 0.0 3.925449767853312 16.143937264016873 3.925449767853312 9.208187539523752 0 0.5 0.0 0.3494850021680094 0.0 + + [R{M(Oxidation (M))|F}][DP]GTN{[VA]|[{I|L}G]};[R{M(Oxidation (M))|F}][DP]GTGG{[VA]|[{I|L}G]};[NG]{I|L}[KC]GTN{[VA]|[{I|L}G]};[NG]{I|L}[C(Carbamidomethyl (C))K]TN{[VA]|[{I|L}G]};[NG]{I|L}[KC]GTGG{[VA]|[{I|L}G]};[VP][SG][W{M(Oxidation (M))|F}]N{[VA]|[{I|L}G]};[VP][SG][MT]T{[{M(Oxidation (M))|F}H]|[RQ]};[NG]{I|L}[C(Carbamidomethyl (C))K]TGG{[VA]|[{I|L}G]} 3.2424;2.2984;2.1348;1.4652;1.1953;1.0585;0.5459;0.52119 +;-;-;-;-;-;-;- + 103 1 1.635 40220.1 1.0 5407 4637 10037 HBL1_DMSO_200M_050219_2,10046 HBL1_DMSO_200M_050219_2,10046,RFPDGTNGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10047 54.532 56.0 1091700.0 25 0 123720.0 + 30177 QVTPEFRTV 9 73 538.7892747984347 1075.5639966636693 2 538.7907592654228 MULTI CID FTMS 0 0 0 10037 970750.6875 0.7020197924966196 -2 0.2335853576660156 10 Unmodified _QVTPEFRTV_ ENSG00000135925|ENST00000258411|WNT10A 47.594388314883695 0.0456443387682827 4 {[QV]|[N{I|L}]|[RA]|[KV]}TPE{M(Oxidation (M))|F}R{[TV]|[{I|L}S]} 9 0 + 60.014 0.0 0.0 5.5797 5.5797 86.065 0.0 0.0 0.0 51.03417568783641 2.873563221025819 2.873563221025819 12.460762528683702 0 0.7302046884880937 2.0 0.3807196863200844 0.3252574989159953 + + {[QV]|[N{I|L}]|[RA]|[KV]}TPE{M(Oxidation (M))|F}R{[TV]|[{I|L}S]};{[QV]|[N{I|L}]|[RA]|[KV]}TPE{M(Oxidation (M))|F}[VG]{[TV]|[{I|L}S]} 5.5797;4.4212 +;- + 110 + 1 1.635 55566.4 1.0 5408 4637 10037 HBL1_DMSO_200M_050219_2,10047 HBL1_DMSO_200M_050219_2,10047,QVTPEFRTV True True QVTPEFRTV 54.532035 538.790759265423 31966298.0 10037.0 ENSG00000135925|ENST00000258411|WNT10A 5.268863677978516 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10048 54.533 33.0 1645500.0 25 0 95991.0 + + 44926 DPPYSRVI 8 89 473.7293166890149 945.44408044483 2 473.7296020388603 MULTI CID FTMS 0 0 0 10037 921199.8125 0.8810029515804524 -4 0.3410415649414062 11 Unmodified _YPPSPTDGL_ nc|ENSG00000198961|O43164-2|PJA2;ENSG00000198961|ENST00000361189|PJA2 32.116972079565 0.1225432171549407 4 [DP]P 3 -1 25.686 0.0 0.0 2.7169 0.0 0.0 0.0 633.2879884860986 633.2879884860986 2.269987279362624 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [DP]P 2.7169 - 251 1 1.635 48186.7 1.0 5409 4637 10037 HBL1_DMSO_200M_050219_2,10048 HBL1_DMSO_200M_050219_2,10048,YPPSPTDGL False False DPPYSRVI 54.533214 473.72960203886 162173616.0 10037.0 nc|ENSG00000198961|O43164-2|PJA2;;ENSG00000198961|ENST00000361189|PJA2 1.4151145815849304 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10049 54.535 58.0 709400.0 25 0 142940.0 + 14646 IILDEAHNV 9 59 512.2773930607841 1022.5402331883682 2 512.2779418826103 MULTI CID FTMS 0 0 0 10037 824989.3125 0.1890375395609139 3 -0.2852821350097656 12 Unmodified _IILDEAHNV_ ENSG00000116830|ENST00000369466|TTF2 22.736283301280096 0.2418982879461534 4 {I|L}{I|L}VEEA[HN]V 9 2 + 51.839 0.0 0.0 5.0696 5.0696 69.364 0.0 0.0 0.0 35.64110138140197 4.175188874398366 4.175188874398366 0.7082530717588753 0 0.4247425010840047 2.0 0.5 0.3494850021680094 {I|L}{I|L}VEEA[HN]V;{I|L}{I|L}{I|L}DEA[HN]V 5.0696;5.0004 -;+ + 54 + 1 1.635 40525.8 1.0 5410 4637 10037 HBL1_DMSO_200M_050219_2,10049 HBL1_DMSO_200M_050219_2,10049,IILDEAHNV False True IILDEAHNV 54.534682 512.27794188261 62926420.0 10037.0 ENSG00000116830|ENST00000369466|TTF2 6.66767946879069 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10050 54.536 63.0 786850.0 25 0 92544.0 + 29790 QPYYPQHPMV 10 63 630.2967187476028 1258.5788845620054 2 630.2971679568291 MULTI CID FTMS 0 0 0 10037 766971.0 0.6687243578760965 1 -0.0419235229492187 13 Unmodified _QPYYPQHPMV_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 25.399314129420983 0.3980215340001851 4 [QP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{M(Oxidation (M))|F}HP{[ET]|[MV]} 10 4 + 27.553 0.0 0.0 2.1892 2.1892 68.535 0.0 0.0 0.0 10.641792244367265 0.8267100756331125 0.8267100756331125 4.771212547196626 0 0.2887254899964357 0.0 0.5 0.0 [QP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{M(Oxidation (M))|F}HP{[ET]|[MV]};[QP]YY[QP]HP{[ET]|[MV]} 2.1892;1.8101 -;+ + 134 + 1 1.635 44528.1 1.0 5411 4637 10037 HBL1_DMSO_200M_050219_2,10050 HBL1_DMSO_200M_050219_2,10050,QPYYPQHPMV False True QPYYPQHPMV 54.536235 630.297167956829 21421888.0 10037.0 nc|ENSG00000101096|Q13469|NFATC2;;nc|ENSG00000101096|Q13469-5|NFATC2;;nc|ENSG00000101096|Q13469-4|NFATC2;;ENSG00000101096|ENST00000371564|NFATC2;;nc|ENSG00000101096|Q13469-3|NFATC2 9.342116038004557 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10051 54.538 71.0 653200.0 25 0 91349.0 22392 LPSSVSPWPWH 11 52 646.8275398191128 1291.6405267050254 2 646.8274413943291 MULTI CID FTMS 0 0 0 10037 670773.875 0.7970146728802685 1 -0.0419235229492187 14 Unmodified _LPSSVSPWPWH_ nc|ENSG00000162066|Q9Y303-3|AMDHD2 8.155526934196011 0.8366696279279818 4 PVST 4 8 24.412 0.0 0.0 1.89 0.0 0.0 624.2811039528755 280.1305025690063 904.4116065218818 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 PVST 1.89 - 24 + 1 1.635 41172.6 1.0 5412 4637 10037 HBL1_DMSO_200M_050219_2,10051 HBL1_DMSO_200M_050219_2,10051,LPSSVSPWPWH False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10052 54.542 196.0 387660.0 25 0 80712.0 + 17268 KLPEKWESV 9 76 558.3084076216184 1114.6022623100366 2 558.3086425662041 MULTI CID FTMS 0 0 0 10037 543650.625 0.2647710021417497 5 -0.5368461608886719 15 Unmodified _KLPEKWESV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 32.78568957990786 0.1150597335874693 4 [EP]KWESV 7 2 46.075 0.0 0.0 4.1337 0.0 0.0 0.0 256.163986646624 256.163986646624 0.329241303624741 0.0 0.0 0.0 0 0.0 1.0 0.7614393726401688 0.0 + [EP]KWESV 4.1337 + + 149 1 1.635 64443.3 1.0 5413 4637 10037 HBL1_DMSO_200M_050219_2,10052 HBL1_DMSO_200M_050219_2,10052,KLPEKWESV True True KLPEKWESV 54.541674 558.308642566204 66625344.0 10037.0 ENSG00000171490|ENST00000571133|RSL1D1;;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;;nc|ENSG00000171490|O76021-2|RSL1D1;;ENST00000574823.5_1_16:11935494-11935832:-|nuORF 5.15846061706543 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10053 54.543 79.0 583190.0 25 0 75152.0 41836 VPYEPPQV 8 77 464.74269551758135 927.4708381019628 2 464.7429992556572 MULTI CID FTMS 0 0 0 10037 454525.125 0.061966611317886 7 -0.7089729309082031 16 Unmodified _VPYEPPQV_ ENSG00000073282|ENST00000264731|TP63;ENSG00000078900|ENST00000378295|TP73;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;ENST00000603364.5_1_1:3607439-3646013:+|nuORF;nc|ENSG00000073282|Q9H3D4-10|TP63;nc|ENSG00000073282|Q9H3D4-11|TP63;nc|ENSG00000073282|Q9H3D4-12|TP63;nc|ENSG00000073282|Q9H3D4-2|TP63;nc|ENSG00000073282|Q9H3D4-3|TP63;nc|ENSG00000073282|Q9H3D4-4|TP63;nc|ENSG00000073282|Q9H3D4-5|TP63;nc|ENSG00000073282|Q9H3D4-6|TP63;nc|ENSG00000073282|Q9H3D4-7|TP63;nc|ENSG00000073282|Q9H3D4-8|TP63;nc|ENSG00000073282|Q9H3D4-9|TP63;nc|ENSG00000078900|O15350-10|TP73;nc|ENSG00000078900|O15350-11|TP73;nc|ENSG00000078900|O15350-12|TP73;nc|ENSG00000078900|O15350-13|TP73;nc|ENSG00000078900|O15350-2|TP73;nc|ENSG00000078900|O15350-3|TP73;nc|ENSG00000078900|O15350-4|TP73;nc|ENSG00000078900|O15350-5|TP73;nc|ENSG00000078900|O15350-6|TP73;nc|ENSG00000078900|O15350-8|TP73;nc|ENSG00000078900|O15350-9|TP73;TBL1XR1-TP73|1|fusion;TBL1XR1-TP73|2|fusion;TBL1XR1-TP73|3|fusion;TBL1XR1-TP73|4|fusion;TBL1XR1-TP73|5|fusion;TBL1XR1-TP73|6|fusion 14.581692164780916 0.6954967302934248 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVP 5 4 29.392 0.0 0.0 3.1691 0.0 0.0 0.0 339.1665298195093 339.1665298195093 16.293256987620524 0.0 0.0 0.0 0 0.0 1.154901959985743 0.2614393726401688 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVP 3.1691 - 69 1 1.635 43059.0 1.0 5414 4637 10037 HBL1_DMSO_200M_050219_2,10053 HBL1_DMSO_200M_050219_2,10053,VPYEPPQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10054 54.546 134.0 972280.0 25 0 149420.0 + 44655 YPFKPPKV 8 89 325.86056900573425 974.5598776174028 3 325.8603698611259 MULTI CID FTMS 0 0 0 10037 440724.40625 0.0068300634568726 -38 3.0877342224121094 17 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 50.632 0.0 0.0 5.1954 5.1954 79.073 0.0 0.0 0.0 22.70766971142507 5.538588578747365 5.538588578747365 6.497519816658368 0 0.2742275032520141 1.154901959985743 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;YP{M(Oxidation (M))|F}KPV[KP];YP{M(Oxidation (M))|F}KVP[KP];[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]KPP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T]K[HS]KV;{[HG]|PP}KK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.1954;4.5286;4.4004;1.5008;1.1907;1.0912;0.67937;0.60167 +;-;-;-;-;-;-;- + 223 + 1 1.635 110743.2 1.0 5415 4637 10037 HBL1_DMSO_200M_050219_2,10054 HBL1_DMSO_200M_050219_2,10054,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10055 54.55 209.0 411890.0 25 0 45242.0 + -1 YFYGGLMTTQF 11 80 672.3042163728708 1342.5938798125414 2 672.3044921755791 MULTI CID FTMS 0 0 0 10037 416320.0625 0.7686975561839504 2 -0.1723060607910156 18 Oxidation (M) _YFYGGLM(Oxidation (M))TTQF_ REV__ENSG00000156006|ENST00000286479|NAT2 29.081581746732265 0.4093582134107448 4 [DP]RENQQ{M(Oxidation (M))|F}Y{M(Oxidation (M))|F} 10 -1 + 36.445 0.0 0.0 2.7145 2.7145 66.983 0.0 0.0 0.0 4.259687322722812 17.689097685623523 4.259687322722812 3.2403126772771884 0 0.242992819099939 0.0 0.0 0.7059771852360797 [DP]RENQQ{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[DP]RENQ[RH][YE];[DP]RENQ{M(Oxidation (M))|F}YQ{M(Oxidation (M))|F};[DP]REGGQQ{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[DP]RENQ[AG]{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[DP]REN[AG]Q{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[DP]RENQ{M(Oxidation (M))|F}QY{M(Oxidation (M))|F};[DP]REGGQ[RH][YE];[DP]REN[AG][RH][YE];[DP]REGGQ{M(Oxidation (M))|F}YQ{M(Oxidation (M))|F} 2.7145;2.4732;2.2248;2.0319;2.0319;2.0319;1.9103;1.7906;1.7906;1.5422 -;-;-;-;-;-;-;-;-;- 380 1 1.635 69051.3 1.0 5416 4637 10037 HBL1_DMSO_200M_050219_2,10055 HBL1_DMSO_200M_050219_2,10055,YFYGGLMTTQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10056 54.554 188.0 1007800.0 25 0 174730.0 -1 0 119 401.2528936708007 800.4912344084014 2 401.2528259158134 MULTI CID FTMS 0 0 0 10037 374370.46875 0.1575862933518826 -5 0.3979644775390625 19 4 PHP{I|L}PK{I|L} 7 -1 + 70.244 0.0 0.0 8.7751 8.7751 88.71 0.0 0.0 0.0 31.549019599857424 6.232492903979008 6.232492903979008 5.568109453757657 0 1.760001290417896 1.5228787452803376 0.0 0.1989700043360188 PHP{I|L}PK{I|L};PH{I|L}PPK{I|L};PHP{I|L}P{I|L}K;PH{I|L}PP{I|L}K 8.7751;8.0795;7.9965;7.3009 -;-;-;- 221 + 1 1.635 149848.0 1.0 5417 4637 10037 HBL1_DMSO_200M_050219_2,10056 HBL1_DMSO_200M_050219_2,10056, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10057 54.559 267.0 541410.0 25 0 40794.0 -1 ADCLMGEF 8 157 471.6882352060202 941.3619174788404 2 471.6886474490166 MULTI CID FTMS 0 0 0 10037 318895.65625 0.6941405584394957 -1 0.1524543762207031 20 Carbamidomethyl (C) _ADC(Carbamidomethyl (C))LMGEF_ ENSG00000138119|ENST00000359263|MYOF;nc|ENSG00000138119|Q9NZM1-2|MYOF;nc|ENSG00000138119|Q9NZM1-3|MYOF;nc|ENSG00000138119|Q9NZM1-5|MYOF;nc|ENSG00000138119|Q9NZM1-6|MYOF;nc|ENSG00000138119|Q9NZM1-7|MYOF;nc|ENSG00000138119|Q9NZM1-8|MYOF 19.438996006549623 0.6237395211498085 4 {[SA]|[TG]}G[C(Carbamidomethyl (C))N]WT{M(Oxidation (M))|F} 8 -1 {[SA]|[TG]}G[C(Carbamidomethyl (C))N]W + + 24.222 4.2126 0.62387 2.573 2.573 45.199 0.0 0.0 0.0 0.0 0.7318654462251928 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {[SA]|[TG]}G[C(Carbamidomethyl (C))N]WT{M(Oxidation (M))|F} 2.573 - 401 + 1 1.635 109786.1 1.0 5418 4637 10037 HBL1_DMSO_200M_050219_2,10057 HBL1_DMSO_200M_050219_2,10057,ADCLMGEF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10059 54.563 25.0 1637800.0 25 0 138100.0 43527 WWWWIWWQWW 10 49 874.9041028402406 1747.7936527472812 2 874.9066650271416 MULTI CID FTMS 0 0 0 10058 2187367.25 0.804339042771095 -2 0.1943778991699218 1 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 4 {I|L}NA[QP]QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 14 13 45.868 0.0 0.0 2.6244 0.0 0.0 211.09625441718907 0.0 211.09625441718907 0.0 26.78313969538737 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 {I|L}NA[QP]QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.6244 - 286 1 1.635 33857.7 1.0 5419 4638 10058 HBL1_DMSO_200M_050219_2,10059 HBL1_DMSO_200M_050219_2,10059,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 10060 54.564 38.0 979620.0 25 0 85668.0 + 13690 HQIEAVDGEEL 11 51 620.2961617544174 1238.5777705756348 2 620.2966796755791 MULTI CID FTMS 0 0 0 10058 1286893.25 0.1047880422935844 4 -0.4949226379394531 2 Unmodified _HQIEAVDGEEL_ ENSG00000105404|ENST00000222008|RABAC1;ENST00000595226.1_1_19:42461000-42461518:-|nuORF 30.43146612281011 0.3776625119172622 4 [HQ]{I|L}EAVDGEE{I|L} 11 0 + 70.464 0.0 0.0 5.6891 5.6891 86.681 0.0 0.0 0.0 5.862435673934286 51.21192656705813 5.862435673934286 12.730012720637385 0 0.2742275032520141 0.0 0.0 0.0 + + [HQ]{I|L}EAVDGEE{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]AVDGEE{I|L};[VP]{[CA]|SS}HAVDGEE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]AVDGEE{I|L};[VP]{[CA]|SS}HAVDWE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]AVDWE{I|L};[VP]{[CA]|SS}HA[RD]EE{I|L};[VP]{[CA]|SS}H{[RE]|[WV]}GEE{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]{[RE]|[WV]}WE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YT]{[RE]|[WV]}GEE{I|L} 5.6891;4.6613;4.4247;3.9322;3.8909;3.4013;2.6201;2.6201;2.3322;2.1305 +;-;-;-;-;-;-;-;-;- + 217 1 1.635 35141.4 1.0 5420 4638 10058 HBL1_DMSO_200M_050219_2,10060 HBL1_DMSO_200M_050219_2,10060,HQIEAVDGEEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10061 54.567 155.0 331690.0 25 0 47624.0 + 44841 YPNYPNPAV 9 79 517.7509700262003 1033.4873871192003 2 517.7517578005791 MULTI CID FTMS 0 0 0 10058 334201.9375 0.6737943986377013 -2 0.1943778991699218 3 Unmodified _YPNYPNPAV_ ENSG00000129173|ENST00000250024|E2F8 32.116972079565 0.1225432171549407 4 [PA][MT]{[QG]|[NA]}YPAV 10 5 [PA][MT]{[QG]|[NA]}Y + + 14.965 -0.54105 -0.072302 1.448 1.448 44.304 0.0 0.0 0.0 0.0 4.876750844102775 0.0 0.0 0 0.5 0.0 0.0 0.0 [PA][MT]{[QG]|[NA]}YPAV 1.448 - 125 + 1 1.635 52531.4 1.0 5421 4638 10058 HBL1_DMSO_200M_050219_2,10061 HBL1_DMSO_200M_050219_2,10061,YPNYPNPAV True True YPNYPNPAV 54.56738 517.751757800579 15014670.0 10058.0 ENSG00000129173|ENST00000250024|E2F8 6.485840956370036 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10062 54.571 191.0 396340.0 25 0 51489.0 + + 22690 LQDPGNHLI 9 111 503.76945964796886 1005.5243663627376 2 503.7700073122978 MULTI CID FTMS 0 0 0 10058 304532.65625 1.0 0 0.0 4 Unmodified _LQDLQRSF_ ENSG00000110344|ENST00000252108|UBE4A;nc|ENSG00000110344|Q14139-2|UBE4A 37.97399986684836 0.2681860861828418 4 [Q{I|L}]D 3 -1 27.447 0.0 0.0 2.7296 0.0 0.0 0.0 646.331042958694 646.331042958694 15.72051538364164 0.0 0.0 0.0 0 1.0 0.0 0.0 0.6989700043360187 [Q{I|L}]D 2.7296 + + 279 1 1.635 61797.7 1.0 5422 4638 10058 HBL1_DMSO_200M_050219_2,10062 HBL1_DMSO_200M_050219_2,10062,LQDLQRSF False False LQDPGNHLI 54.571049 503.770007312298 5269992.0 10058.0 ENSG00000110344|ENST00000252108|UBE4A;;nc|ENSG00000110344|Q14139-2|UBE4A 5.509627183278401 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10063 54.575 208.0 373210.0 25 0 39185.0 + 43190 VYWVARKPM 9 102 383.8794480713171 1148.6165148141513 3 383.8791381716728 MULTI CID FTMS 0 0 0 10058 250468.6875 0.4509985329461403 -2 0.1943778991699218 5 Unmodified _VYWVARKPM_ ENSG00000137038|ENST00000358227|DMAC1;nc|ENSG00000137038|Q96GE9|DMAC1 19.361941925380144 0.3125782356748823 4 VYWV{M(Oxidation (M))|F} 5 4 51.938 0.0 0.0 4.5218 0.0 0.0 0.0 451.27732263736567 451.27732263736567 44.94850021680094 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 VYWV{M(Oxidation (M))|F} 4.5218 - 170 + 1 1.635 71733.4 1.0 5423 4638 10058 HBL1_DMSO_200M_050219_2,10063 HBL1_DMSO_200M_050219_2,10063,VYWVARKPM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10064 54.588 750.0 268760.0 25 0 16100.0 + 32180 RVVDDDGMTSL 11 157 604.2844745232246 1206.5543961132491 2 604.2853881716728 MULTI CID FTMS 0 0 0 10058 233709.09375 0.768826779839684 -1 0.0419235229492187 6 Unmodified _RVVDDDGMTSL_ ENSG00000213337|ENST00000393537|ANKRD39 81.9152076656658 0.0062322988290358 4 {[TV]|[{I|L}S]}T[PA]DDGMTS{I|L} 12 4 + 89.84 0.0 0.0 7.446 7.446 80.41 0.0 0.0 0.0 1.7840176579857283 9.58332921565325 1.7840176579857283 1.7840176579857283 0 1.305462187404089 1.2218487496163564 2.6307196863200843 0.0 {[TV]|[{I|L}S]}T[PA]DDGMTS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]DDGMTS{I|L};{NN|[MP]|[D{I|L}]|[EV]}WG{I|L}DGMTS{I|L};{[MG]|[TS]}{I|L}[PA]DDGMTS{I|L};{[TV]|[{I|L}S]}T[WP]DGMTS{I|L};[YV]GMGD[HQ]TS{I|L};{[MG]|[TS]}{I|L}[WP]DGMTS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[DA]|[EG]}G{I|L}DGMTS{I|L};{[MG]|[TS]}[WP]{I|L}DGMTS{I|L};{NN|[MP]|[D{I|L}]|[EV]}WG{I|L}DGMGM{I|L} 7.446;7.2981;7.2406;7.0983;6.898;6.6517;6.5503;6.484;6.2819;6.2658 -;-;-;-;-;-;-;-;-;- 2202 1 1.635 148036.6 1.0 5424 4638 10058 HBL1_DMSO_200M_050219_2,10064 HBL1_DMSO_200M_050219_2,10064,RVVDDDGMTSL True True RVVDDDGMTSL 54.587991 604.285388171673 2580924.5 10058.0 ENSG00000213337|ENST00000393537|ANKRD39 7.890199502309163 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10065 54.591 140.0 893900.0 25 0 86339.0 + 39601 VDHHPAPK 8 108 450.7379521832559 0 450.7382690310478 PEAK CID FTMS 0 0 0 10058 232904.125 1.0 0 0.0 7 Unmodified _VDHHPAPK_ REV__ENSG00000142530|ENST00000600100|GARIN5A;REV__nc|ENSG00000142530|Q6IPT2-2|GARIN5A 28.486842064014134 0.2575685520298453 4 DH{M(Oxidation (M))|F}{I|L}K 5 -1 35.037 0.0 0.0 3.8953 0.0 0.0 99.0665885843086 157.04445825748283 256.11104684179145 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.3807196863200844 0.3494850021680094 DH{M(Oxidation (M))|F}{I|L}K 3.8953 - 185 + 1 1.635 97078.0 1.0 5425 4638 10058 HBL1_DMSO_200M_050219_2,10065 HBL1_DMSO_200M_050219_2,10065,VDHHPAPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10066 54.605 800.0 159250.0 25 0 18481.0 + 45176 YQLEQKDVNSL 11 146 668.8413172808245 1335.6680816284488 2 668.8419677615166 MULTI CID FTMS 0 0 0 10058 178844.875 0.7889863546750525 -1 0.0419235229492187 8 Unmodified _YQLEQKDVNSL_ ENSG00000123545|ENST00000316149|NDUFAF4 118.20947048124656 0.0349479733159205 4 [YQ]{I|L}EQ[WR]NS{I|L} 10 3 + 86.94 0.0 0.0 6.5091 6.5091 86.964 0.0 0.0 0.0 34.08728981070067 13.037275116073346 13.037275116073346 9.164539485499262 0 2.1549471895720984 1.3979400086720375 1.4489700043360187 1.3556270500406935 [YQ]{I|L}EQ[WR]NS{I|L};[YQ]{I|L}E[AG][WR]NS{I|L};[YQ]{I|L}EQ[RN]WS{I|L};[YQ]{I|L}EQ[WR]GGS{I|L};[YQ]{I|L}E[R{I|L}][NS]NS{I|L};[YQ]{I|L}E[R{I|L}]EWS{I|L};[YQ]{I|L}[RN]QEWS{I|L};[YQ]{I|L}E[AG][RN]WS{I|L};[YQ]{I|L}EQ[RN]{I|L}C(Carbamidomethyl (C)){I|L};[YQ]{I|L}E[RH]S{[CT]|[{M(Oxidation (M))|F}G]}S{I|L} 6.5091;5.8229;5.7485;5.6272;5.2888;5.2143;5.1316;5.0624;4.7019;4.7015 -;-;-;-;-;-;-;-;-;- 3843 + 1 1.635 97653.4 0.9399999976158142 5426 4638 10058 HBL1_DMSO_200M_050219_2,10066 HBL1_DMSO_200M_050219_2,10066,YQLEQKDVNSL True True YQLEQKDVNSL 54.604649 668.841967761517 1663522.75 10058.0 ENSG00000123545|ENST00000316149|NDUFAF4 7.031452020009358 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10067 54.611 339.0 457030.0 25 0 49371.0 + 22041 LPPPPPPAM 9 145 458.751710776598 915.488868619996 2 458.7510558962822 MULTI CID FTMS 0 0 0 10058 166780.75 0.0377086566051916 58 -5.560272216796875 9 Unmodified _LPPPPPPAM_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 56.04830969593885 0.0282699710924866 4 [{I|L}P]PPPP 6 3 37.171 0.0 0.0 4.0602 0.0 0.0 0.0 314.1168678219007 314.1168678219007 14.150378042405904 0.0 0.0 0.0 0 1.1307196863200843 1.2218487496163564 0.0 0.0 + [{I|L}P]PPPP 4.0602 + + 380 1 1.635 124323.9 1.0 5427 4638 10058 HBL1_DMSO_200M_050219_2,10067 HBL1_DMSO_200M_050219_2,10067,LPPPPPPAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10068 54.625 800.0 254970.0 25 0 15385.0 + 35107 SQVTVAVRV 9 194 479.78811094714194 957.561668961084 2 479.7887756228447 MULTI CID FTMS 0 0 0 10058 147553.703125 0.2480317543698373 3 -0.3367118835449219 10 Unmodified _SQVTVAVRV_ ENSG00000118193|ENST00000367350|KIF14 51.629811660486645 0.0367964933207742 4 {[QS]|[NT]}VTVAVRV 9 0 + 55.114 0.0 0.0 5.7557 5.7557 76.672 0.0 0.0 0.0 29.172365157360872 12.523204176022771 12.523204176022771 3.0102999566398125 0 0.9247425010840048 0.7695510786217261 0.3252574989159953 0.3807196863200844 + + {[QS]|[NT]}VTVAVRV;{[QS]|[NT]}VVTAVRV;{[QS]|[NT]}V[{I|L}A]SVRV 5.7557;5.4413;3.4 +;-;- + 671 + 1 1.635 154588.0 0.800000011920929 5428 4638 10058 HBL1_DMSO_200M_050219_2,10068 HBL1_DMSO_200M_050219_2,10068,SQVTVAVRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10069 54.638 800.0 131780.0 25 0 55783.0 -1 0 57 1075.4377347028712 3223.291374708814 3 1075.772998034954 MULTI CID FTMS 0 0 0 10058 139770.0625 0.5915787389449546 1 -0.1303825378417968 11 4 W 1 -1 5.4846 0.0 0.0 0.17015 0.0 0.0 2164.746160941039 869.4385104722237 3034.1846714132625 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.17015 - 56 + 1 1.635 84206.4 0.6800000071525574 5429 4638 10058 HBL1_DMSO_200M_050219_2,10069 HBL1_DMSO_200M_050219_2,10069, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10070 54.654 800.0 259360.0 25 0 17036.0 + 40232 VGSGKWSIVF 10 257 360.53431469388 1078.58111468184 3 360.5341979861259 MULTI CID FTMS 0 0 0 10058 138526.96875 1.0 0 0.0 12 Unmodified _VGSGKWSIVF_ REV__ENST00000328194.7_2_11:9182267-9182318:-|nuORF 21.53697664764585 0.484802182336468 4 VYV 3 -1 34.781 0.0 0.0 3.2247 0.0 0.0 0.0 714.3569429986936 714.3569429986936 6.6890323941874 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 VYV 3.2247 - 482 + 1 1.635 172664.7 0.6100000143051147 5430 4638 10058 HBL1_DMSO_200M_050219_2,10070 HBL1_DMSO_200M_050219_2,10070,VGSGKWSIVF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10071 54.661 433.0 358670.0 25 0 36961.0 + 26985 PEGRAVPV 8 152 412.734239045518 0 412.7353088259697 PEAK CID FTMS 0 0 0 10058 115788.765625 0.6824650289305868 2 -0.2433586120605468 13 Unmodified _PEGRAVPV_ REV__ENSG00000158552|ENST00000289528|ZFAND2B;REV__ENST00000464902.5_1_2:220071990-220073377:+|nuORF;REV__ENST00000469596.5_1_2:220071990-220073295:+|nuORF;REV__ENST00000475533.1_1_2:220071990-220074025:+|nuORF;REV__nc|ENSG00000158552|Q8WV99-2|ZFAND2B 12.531546534597751 0.5131024102181418 4 PG 2 -1 10.573 0.0 0.0 1.284 0.0 0.0 186.06132141739187 480.2968233697876 666.3581447871794 0.0 0.0 0.0 0.0 0 0.1989700043360188 0.0 0.0 0.0 PG 1.284 - 30 + 1 1.635 125622.7 1.0 5431 4638 10058 HBL1_DMSO_200M_050219_2,10071 HBL1_DMSO_200M_050219_2,10071,PEGRAVPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10072 54.667 304.0 306090.0 25 0 29459.0 + 9721 FLYDDNQRV 9 95 585.2833469504492 1168.5521409676985 2 585.7844116091728 MULTI CID FTMS 0 0 0 10058 110857.9609375 0.5177016453563503 -1 0.0419235229492187 14 Unmodified _FLYDDNQRV_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 31.26834338654808 0.1333407332142048 4 [YV][RP]DDY{I|L}E 9 8 + 52.615 0.0 0.0 4.5026 4.5026 66.333 0.0 0.0 0.0 0.3599765327151871 0.3599765327151871 0.3599765327151871 0.3599765327151871 0 0.4247425010840047 1.2218487496163564 0.0 0.3807196863200844 [YV][RP]DDY{I|L}E;{M(Oxidation (M))|F}{I|L}YDDNQ[RV];{M(Oxidation (M))|F}{I|L}YDD[RP]{I|L}M;{M(Oxidation (M))|F}{I|L}YDDN[AG][RV];{M(Oxidation (M))|F}{I|L}YDDGGQ[RV];[Y{I|L}]{M(Oxidation (M))|F}DDNQ[RV];{[YD]|[{M(Oxidation (M))|F}M]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WT]|[RM]}V{I|L}E;{M(Oxidation (M))|F}{I|L}YDDGG[AG][RV];[Y{I|L}]{M(Oxidation (M))|F}DD[RP]{I|L}M;{M(Oxidation (M))|F}{I|L}V{[WT]|[RM]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EM 4.5026;4.4718;4.138;3.6838;3.6838;3.0728;3.0591;2.8995;2.7391;2.6268 -;+;-;-;-;-;-;-;-;- + 307 1 1.635 74879.9 1.0 5432 4638 10058 HBL1_DMSO_200M_050219_2,10072 HBL1_DMSO_200M_050219_2,10072,FLYDDNQRV False True FLYDDNQRV 54.666997 585.2834 2784888.25 10058.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;nc|ENSG00000131747|P11388-2|TOP2A;;ENSG00000077097|ENST00000264331|TOP2B 5.327696323394775 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10073 54.681 800.0 127390.0 25 0 6280.9 + 36313 SYLKNDAGGSL 11 167 562.7827439880654 1123.5509350429306 2 563.2833740115166 MULTI CID FTMS 0 0 0 10058 99409.078125 0.3930496928066107 3 -0.3367118835449219 15 Unmodified _SYLKNDAGGSL_ REV__ENSG00000138442|ENST00000261015|WDR12;REV__ENST00000467777.1_1_2:203745585-203747529:-|nuORF 14.40537977576856 0.7354982482299568 4 {I|L} 1 -1 12.474 0.0 0.0 1.1103 0.0 0.0 992.455718223398 0.0 992.455718223398 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1103 + + 286 + 1 1.635 80148.1 0.699999988079071 5433 4638 10058 HBL1_DMSO_200M_050219_2,10073 HBL1_DMSO_200M_050219_2,10073,SYLKNDAGGSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10074 54.689 398.0 194160.0 25 0 18962.0 -1 TMAKESSIIGV 11 134 576.3012655244693 1150.5879781157385 2 576.3034545779228 MULTI CID FTMS 0 0 0 10058 88860.703125 0.8957869737950392 1 -0.1303825378417968 16 Oxidation (M) _TM(Oxidation (M))AKESSIIGV_ ENSG00000116791|ENST00000340866|CRYZ;nc|ENSG00000116791|Q08257-2|CRYZ;nc|ENSG00000116791|Q08257-3|CRYZ 28.49450938151212 0.4231428536161201 4 S{I|L}{I|L}R 4 -1 25.534 0.0 0.0 2.2192 0.0 0.0 663.2859974591812 0.0 663.2859974591812 0.0 8.086681479559203 0.0 0.0 0 0.7429928190999391 0.0 0.7302046884880937 0.0 S{I|L}{I|L}R 2.2192 - 413 1 1.635 64007.5 1.0 5434 4638 10058 HBL1_DMSO_200M_050219_2,10074 HBL1_DMSO_200M_050219_2,10074,TMAKESSIIGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10076 54.693 5.2 12283000.0 25 0 2166800.0 + 36146 SVVDHFNRI 9 67 362.8614122019854 1085.5624072061562 3 362.8613464236259 MULTI CID FTMS 0 0 0 10075 9167267.0 0.915207181516528 1 -0.11297607421875 1 Unmodified _SVVDHFNRI_ ENSG00000103035|ENST00000219313|PSMD7;ENST00000422197.2_1_1:51837944-51838202:+|nuORF;ENST00000566015.1_1_16:74330767-74334139:+|nuORF 29.081581746732265 0.1611639662936252 4 [VS]VDH{M(Oxidation (M))|F} 6 3 56.911 0.0 0.0 5.2426 0.0 0.0 0.0 398.21601282291255 398.21601282291255 26.977437731477423 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + [VS]VDH{M(Oxidation (M))|F} 5.2426 + + 112 + 1 1.633 62624.0 1.0 5435 4639 10075 HBL1_DMSO_200M_050219_2,10076 HBL1_DMSO_200M_050219_2,10076,SVVDHFNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10077 54.695 26.0 1719000.0 25 0 229910.0 + 24837 MPKPDPTVI 9 73 499.2730172419994 996.5314815507988 2 499.2732116580009 MULTI CID FTMS 0 0 0 10075 2082890.125 1.0 0 0.0 2 Unmodified _MPKPDPTVI_ ENSG00000152689|ENST00000403687|RASGRP3;nc|ENSG00000152689|Q8IV61-2|RASGRP3 29.081581746732265 0.1611639662936252 4 [KP][DP]TPMV{I|L} 9 3 + 44.403 0.0 0.0 4.4557 4.4557 80.403 0.0 0.0 0.0 0.915149811213496 32.351453248366795 0.915149811213496 9.547509540478025 0 0.9247425010840048 0.0 1.2302046884880935 0.0 [KP][DP]TPMV{I|L};[KP][DP]M[TP]V{I|L};[KP]M[DP][TP]V{I|L} 4.4557;3.4977;3.4977 -;-;- 139 1 1.633 37564.2 1.0 5436 4639 10075 HBL1_DMSO_200M_050219_2,10077 HBL1_DMSO_200M_050219_2,10077,MPKPDPTVI False True MPKPDPTVI 54.694665 499.273211658001 50979896.0 10075.0 ENSG00000152689|ENST00000403687|RASGRP3;;nc|ENSG00000152689|Q8IV61-2|RASGRP3 6.267673969268799 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10078 54.696 35.0 2039600.0 25 0 188340.0 + 22051 LPPPPPPHL 9 78 482.78449894353474 963.5544449538696 2 482.7845641970634 MULTI CID FTMS 0 0 0 10075 1578316.25 0.8176365067341125 -1 0.1303825378417968 3 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 56.04830969593885 0.0282699710924866 4 {I|L}PPPPPP[H{I|L}] 9 0 + 85.679 0.0 0.0 8.892 8.892 97.08 0.0 0.0 0.0 78.6008406144498 7.147642715192504 7.147642715192504 22.21848749616356 0 0.805462187404089 2.0 0.0 0.0 + + {I|L}PPPPPP[H{I|L}];{I|L}PPP[YK][H{I|L}];{I|L}PP[YK]P[H{I|L}];{I|L}P[YK]PP[H{I|L}];{I|L}[YK]PPP[H{I|L}];{I|L}[YK][YK][H{I|L}] 8.892;6.5861;6.5861;6.191;3.6745;1.3757 +;-;-;-;-;- + 87 + 1 1.633 58745.2 1.0 5437 4639 10075 HBL1_DMSO_200M_050219_2,10078 HBL1_DMSO_200M_050219_2,10078,LPPPPPPHL True True LPPPPPPHL 54.695844 482.784564197063 233923452.0 10075.0 ENSG00000108349|ENST00000264645|CASC3 7.226200421651204 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10079 54.701 306.0 674810.0 25 0 181870.0 -1 0 54 1129.464233432651 3385.370870898153 3 1129.799243152142 MULTI CID FTMS 0 0 0 10075 1250628.5 0.8317804591249013 1 -0.11297607421875 4 4 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYGYW 7 -1 16.955 0.0 0.0 0.50083 0.0 0.0 1311.4666675161122 1031.516260326651 2342.982927842764 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYGYW 0.50083 - 82 + 1 1.633 175586.9 1.0 5438 4639 10075 HBL1_DMSO_200M_050219_2,10079 HBL1_DMSO_200M_050219_2,10079, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10080 54.703 56.0 1597800.0 25 0 280050.0 + 22647 LPYQIKKI 8 88 334.8831769753103 1001.6277015261307 3 334.8828918337822 MULTI CID FTMS 0 0 0 10075 904890.125 0.089040799512253 -2 0.1723060607910156 5 Unmodified _LPYQIKKI_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 34.10243960390752 0.3329570729325616 4 {I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}K{I|L}K 8 4 + 58.652 0.0 0.0 5.8557 5.8557 73.421 0.0 0.0 0.0 16.40978057358332 1.0914446942506828 1.0914446942506828 1.0914446942506828 0 0.5 0.0 0.0 0.4247425010840047 {I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}K{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}KK{I|L};{I|L}PYQ{I|L}K{I|L}K;{I|L}PYQ{I|L}KK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[AG]{I|L}K{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}[AG]{I|L}KK{I|L};{I|L}PY[AG]{I|L}K{I|L}K;{I|L}PY[AG]{I|L}KK{I|L};{I|L}{I|L}P[YQ]K{I|L}K;{I|L}{I|L}P[YQ]KK{I|L} 5.8557;5.7467;5.5552;5.4462;4.931;4.822;4.6304;4.5215;3.1852;3.0762 -;-;-;+;-;-;-;-;-;- + 323 + 1 1.633 77227.9 1.0 5439 4639 10075 HBL1_DMSO_200M_050219_2,10080 HBL1_DMSO_200M_050219_2,10080,LPYQIKKI False True LPYQIKKI 54.702882 334.882891833782 155666920.0 10075.0 nc|ENSG00000127481|Q5T4S7-2|UBR4;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4 4.420060793558757 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10081 54.705 106.0 643140.0 25 0 150240.0 + -1 LPRGGSVLV 9 81 449.2793358237181 896.5441187142362 2 449.2795287966728 MULTI CID FTMS 0 0 0 10075 669007.375 0.5791114048955799 -1 0.1303825378417968 6 Oxidation (M) _VLPM(Oxidation (M))PILV_ ENSG00000090339|ENST00000264832|ICAM1 32.45364647766026 0.3613649037604678 4 [{I|L}P]R[NS]V{I|L}V 8 -1 + 41.688 0.0 0.0 4.6498 4.6498 85.021 0.0 0.0 0.0 9.69273760456403 26.281446971601312 9.69273760456403 41.687522094009 0 0.8807196863200843 1.3010299956639813 0.3494850021680094 0.0 [{I|L}P]R[NS]V{I|L}V 4.6498 - 52 1 1.633 57989.5 1.0 5440 4639 10075 HBL1_DMSO_200M_050219_2,10081 HBL1_DMSO_200M_050219_2,10081,VLPMPILV False False LPRGGSVLV 54.705136 449.279528796673 9737537.0 10075.0 ENSG00000090339|ENST00000264832|ICAM1 2.929300586382548 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10082 54.707 61.0 771460.0 25 0 49786.0 15841 ISLFDDTSY 9 78 530.7435245140377 1059.4724960948754 2 530.7436401247978 MULTI CID FTMS 0 0 0 10075 618919.8125 0.6279210210922942 4 -0.44561767578125 7 Unmodified _ISLFDDTSY_ ENSG00000172071|ENST00000303236|EIF2AK3 16.942295170755138 0.3780752226737986 4 {I|L}P 2 8 41.211 0.0 0.0 3.8898 0.0 0.0 0.0 846.310943783224 846.310943783224 2.5134875797167666 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {I|L}P 3.8898 - 100 + 1 1.633 46092.0 1.0 5441 4639 10075 HBL1_DMSO_200M_050219_2,10082 HBL1_DMSO_200M_050219_2,10082,ISLFDDTSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10083 54.71 170.0 403470.0 25 0 44124.0 + 45843 YYPTSSSTSF 10 94 570.2485734316576 1138.4825939301152 2 570.2489501833916 MULTI CID FTMS 0 0 0 10075 540583.9375 0.7650713702168793 -1 0.1303825378417968 8 Unmodified _YYPTSSSTSF_ ENSG00000102119|ENST00000369842|EMD;ENST00000471965.1_1_X:153609106-153609554:+|nuORF 46.020951573049366 0.1035046897853725 4 YY[C(Carbamidomethyl (C))K]TGNS{M(Oxidation (M))|F} 9 6 + 45.912 0.0 0.0 4.0327 4.0327 82.084 0.0 0.0 0.0 23.195057786103902 7.763232772096686 7.763232772096686 28.19599075987611 0 0.7429928190999391 2.0 0.3252574989159953 0.2887254899964357 YY[C(Carbamidomethyl (C))K]TGNS{M(Oxidation (M))|F};YY[C(Carbamidomethyl (C))K]T{[CA]|SS}[KC] 4.0327;1.5561 -;- 357 + 1 1.633 55395.0 1.0 5442 4639 10075 HBL1_DMSO_200M_050219_2,10083 HBL1_DMSO_200M_050219_2,10083,YYPTSSSTSF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10084 54.72 565.0 284650.0 25 0 31160.0 + -1 KMTLCCTLDHY 11 137 692.806364406984 1383.598175880768 2 692.8072387576103 MULTI CID FTMS 0 0 0 10075 375823.25 0.560481995135793 2 -0.206329345703125 9 Carbamidomethyl (C) _KMTLC(Carbamidomethyl (C))CTLDHY_ REV__ENSG00000125772|ENST00000379019|GPCPD1;REV__ENST00000433031.1_1_7:57216803-57217046:-|nuORF 15.248480904072842 0.7179608125786238 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]QT[HM]A 9 -1 47.883 0.0 0.0 3.4608 0.0 0.0 0.0 394.1424118418644 394.1424118418644 8.523233823696401 0.0 0.0 0.0 0 1.0 1.6989700043360187 1.7302046884880935 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]QT[HM]A 3.4608 - 13015 1 1.633 115382.2 1.0 5443 4639 10075 HBL1_DMSO_200M_050219_2,10084 HBL1_DMSO_200M_050219_2,10084,KMTLCCTLDHY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10085 54.73 578.0 321010.0 25 0 20139.0 43768 YEIYMIVY 8 182 547.2694878370107 1092.5244227408214 2 547.2696411013603 MULTI CID FTMS 0 0 0 10075 351356.78125 0.0217421476996929 8 -0.7493858337402344 10 Unmodified _YEIYMIVY_ ENST00000553544.1_1_14:35465915-35466038:+|nuORF 24.67388899826682 0.525179942228231 4 TY[KS]W{M(Oxidation (M))|F}VY 8 5 + 64.786 0.0 0.0 5.93 5.93 87.103 0.0 0.0 0.0 18.521825181113627 10.1059905927697 10.1059905927697 11.392433815615776 0 1.6677353201839438 2.0 0.0 0.3494850021680094 TY[KS]W{M(Oxidation (M))|F}VY;TY[KS]{I|L}E[HC]{I|L};TY[KS]W{M(Oxidation (M))|F}YV;[YT][WK]YAVY;TYY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KQ]{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}Y[HA]AGAVY;[PS]N{[DS]|[MA]|[CV]|TT}{I|L}AGAVY;TY{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}T[HC]{I|L};{[QN]|[E{I|L}]|[KN]}Y[HA]QAVY;{[QN]|[E{I|L}]|[KN]}Y[HA]AQVY 5.93;4.8872;4.5319;4.377;3.7626;3.5975;3.5353;3.5352;3.2752;3.2711 -;-;-;-;-;-;-;-;-;- 2708 + 1 1.633 145333.9 1.0 5444 4639 10075 HBL1_DMSO_200M_050219_2,10085 HBL1_DMSO_200M_050219_2,10085,YEIYMIVY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10086 54.742 673.0 276730.0 25 0 24114.0 + + 13714 KILDDSDSNLSV 12 157 653.3302758049635 1304.645998676727 2 653.3306152224541 MULTI CID FTMS 0 0 0 10075 267111.21875 0.2824483214837484 -1 0.1303825378417968 11 Unmodified _HQPREQPDLSV_ ENSG00000196862|ENST00000408999|RGPD4;ENSG00000153165|ENST00000409886|RGPD3;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3 63.960520009940105 0.0530716371881472 4 [K{I|L}]{I|L}DDSDSN{I|L}SV 12 -1 + 117.72 0.0 0.0 9.0229 9.0229 92.214 0.0 0.0 0.0 8.365711575425308 82.65798327899509 8.365711575425308 9.098233696509112 0 1.16944517631652 0.585026652029182 2.2104093769761874 1.3945990182825423 [K{I|L}]{I|L}DDSDSN{I|L}SV;[K{I|L}]{I|L}DDSDSGG{I|L}SV;{I|L}{I|L}KDDSDSN{I|L}SV;[K{I|L}]{I|L}DSDDSN{I|L}SV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]DSDSN{I|L}SV;{I|L}{I|L}KDDSDSGG{I|L}SV;{[QV]|[N{I|L}]|[RA]|[KV]}SNRSDSN{I|L}SV;[VS][PS][{I|L}T]SDSN{I|L}SV;[K{I|L}]{I|L}DD{[C(Carbamidomethyl (C))E]|[WC]}N{I|L}SV;[K{I|L}]{I|L}DSDDSGG{I|L}SV 9.0229;8.3255;8.3222;8.0236;7.9033;7.6248;7.56;7.4367;7.426;7.3262 -;-;-;-;-;-;-;-;-;- 5612 1 1.633 141599.5 1.0 5445 4639 10075 HBL1_DMSO_200M_050219_2,10086 HBL1_DMSO_200M_050219_2,10086,HQPREQPDLSV False False KILDDSDSNLSV 54.741733 653.330615222454 12772764.0 10075.0 ENSG00000196862|ENST00000408999|RGPD4;;ENSG00000153165|ENST00000409886|RGPD3;;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3 7.277602990468343 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10087 54.747 258.0 333180.0 25 0 32064.0 + 17753 KQDQTLAEL 9 137 523.2797061477312 1044.5448593622623 2 523.2788574099541 MULTI CID FTMS 0 0 0 10075 248912.71875 0.7622977977487486 -1 0.1303825378417968 12 Unmodified _KQDQTLAEL_ ENSG00000112984|ENST00000394894|KIF20A;nc|ENSG00000112984|O95235-2|KIF20A 62.57269311338072 0.0246576765497938 4 {[QN]|[E{I|L}]|[KN]}AWT{I|L}AE{I|L} 9 3 + 76.268 0.0 0.0 7.3016 7.3016 90.23 0.0 0.0 0.0 18.224412573477565 16.478174818886373 16.478174818886373 9.208187539523747 0 0.75 0.721246399047171 1.2491348669726234 0.8921590589602533 {[QN]|[E{I|L}]|[KN]}AWT{I|L}AE{I|L};{[QN]|[E{I|L}]|[KN]}A{[DA]|[EG]}T{I|L}AE{I|L};{[CP]|[EA]}{I|L}WT{I|L}AE{I|L};[{I|L}T]DDR{I|L}AE{I|L};[QA]{[SA]|[TG]}AAT{I|L}AE{I|L};[QA]{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}AE{I|L};{[CP]|[EA]}{I|L}{[DA]|[EG]}T{I|L}AE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}KQT{I|L}AE{I|L};[AG][QT]AAT{I|L}AE{I|L};[{I|L}T]A[WE]{I|L}AE{I|L} 7.3016;6.42;5.5568;5.1356;4.7716;4.7009;4.6753;4.5842;4.5825;4.5756 -;-;-;-;-;-;-;-;-;- 1072 1 1.633 72061.0 1.0 5446 4639 10075 HBL1_DMSO_200M_050219_2,10087 HBL1_DMSO_200M_050219_2,10087,KQDQTLAEL True True KQDQTLAEL 54.746525 523.278857409954 2617642.25 10075.0 nc|ENSG00000112984|O95235-2|KIF20A;;ENSG00000112984|ENST00000394894|KIF20A 1.1100171009699504 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10088 54.76 800.0 327190.0 25 0 41168.0 + 15308 IPKSNKAL 8 207 435.7733488325226 869.5321447318453 2 435.7737914919853 MULTI CID FTMS 0 0 0 10075 202290.234375 0.2452931238217131 -3 0.3247604370117187 13 Unmodified _IPKSNKAL_ REV__ENSG00000058404|ENST00000395749|CAMK2B;REV__ENST00000466584.5_1_7:44259663-44260543:-|nuORF;REV__ENST00000489429.5_1_7:44259663-44268887:-|nuORF;REV__ENST00000497584.5_1_7:44259663-44373862:-|nuORF;REV__ENST00000523845.5_1_7:44259663-44270619:-|nuORF;REV__nc|ENSG00000058404|Q13554-2|CAMK2B;REV__nc|ENSG00000058404|Q13554-3|CAMK2B;REV__nc|ENSG00000058404|Q13554-4|CAMK2B;REV__nc|ENSG00000058404|Q13554-5|CAMK2B;REV__nc|ENSG00000058404|Q13554-6|CAMK2B;REV__nc|ENSG00000058404|Q13554-7|CAMK2B;REV__nc|ENSG00000058404|Q13554-8|CAMK2B 26.88365393820708 0.4786498634179528 4 {I|L}P 2 -1 38.707 0.0 0.0 4.4514 0.0 0.0 0.0 656.3750953180617 656.3750953180617 20.82628317169033 0.0 0.0 0.0 0 0.4013870797934459 1.5228787452803376 0.0 0.0 {I|L}P 4.4514 + + 615 + 1 1.633 201122.4 0.8700000047683716 5447 4639 10075 HBL1_DMSO_200M_050219_2,10088 HBL1_DMSO_200M_050219_2,10088,IPKSNKAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10089 54.767 311.0 335960.0 25 0 40105.0 -1 0 127 358.21132303011143 714.4080931270229 2 358.7129089236259 MULTI CID FTMS 0 0 0 10075 187970.46875 0.7733417708027517 -4 0.4058914184570312 14 4 {I|L} 1 -1 15.485 0.0 0.0 2.1675 0.0 0.0 583.3130746717479 0.0 583.3130746717479 0.0 3.993546785179944 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.1675 - 134 + 1 1.633 86000.1 1.0 5448 4639 10075 HBL1_DMSO_200M_050219_2,10089 HBL1_DMSO_200M_050219_2,10089, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10090 54.781 800.0 277620.0 25 0 11463.0 -1 MLIFYDQRQVL 11 136 721.3798904911009 1440.7452280490018 2 721.3840820193291 MULTI CID FTMS 0 0 0 10075 184360.765625 0.5039391437105376 -1 0.1303825378417968 15 Oxidation (M) _M(Oxidation (M))LIFYDQRQVL_ ENSG00000007541|ENST00000321878|PIGQ;nc|ENSG00000007541|Q9BRB3-3|PIGQ;nc|ENSG00000007541|Q9BRB3|PIGQ 20.41453444215458 0.6105011870913812 4 {[SA]|[TG]}GGQ{I|L}{I|L}PSQSANV{I|L} 15 -1 + 115.47 0.0 0.0 8.0149 8.0149 79.027 0.0 0.0 0.0 16.783547893830914 16.69006780958577 16.69006780958577 0.4968123769230601 0 0.9247425010840048 1.0969100130080565 2.8873453591370684 1.0044321917401078 {[SA]|[TG]}GGQ{I|L}{I|L}PSQSANV{I|L};{[SA]|[TG]}GP[WK]PSQSANV{I|L};{[SA]|[TG]}NQ{I|L}{I|L}PSQSANV{I|L};{[SA]|[TG]}GGQ{I|L}{I|L}PQSSANV{I|L};{[SA]|[TG]}GGQ{I|L}{I|L}PSQSAGGV{I|L};{[SA]|[TG]}GGQ{I|L}{I|L}PS[AG]SANV{I|L};{[SA]|[TG]}GP[WK]PQSSANV{I|L};{[SA]|[TG]}GP[WK]PSQSAGGV{I|L};{[SA]|[TG]}GP[WK]PS[AG]SANV{I|L};{[SA]|[TG]}NQ{I|L}{I|L}PQSSANV{I|L} 8.0149;7.9805;7.9092;7.389;7.3881;7.3881;7.3545;7.3523;7.3523;7.2833 -;-;-;-;-;-;-;-;-;- 7286 1 1.633 157595.3 0.800000011920929 5449 4639 10075 HBL1_DMSO_200M_050219_2,10090 HBL1_DMSO_200M_050219_2,10090,MLIFYDQRQVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10091 54.787 335.0 307160.0 25 0 13038.0 + + 27181 VPNEHIMNV 9 142 525.766605731737 1049.5186585302738 2 526.7644531130791 MULTI CID FTMS 0 0 0 10075 175732.0 0.2636299239361016 -7 0.5702705383300781 16 Unmodified _PGEGHLDNIV_ nc|ENSG00000171634|Q12830|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF 24.020572477871973 0.4289996903560794 4 [KT]MV{I|L}DMNV 9 -1 + 45.238 0.0 0.0 4.3103 4.3103 70.78 0.0 0.0 0.0 2.243012119929091 4.070137341235736 2.243012119929091 3.0102999566398125 0 0.0 0.0 0.2396518287104437 0.4247425010840047 [KT]MV{I|L}DMNV;[KT]VM{I|L}DMNV;[DP]QH{I|L}VMNP;[KT]M{I|L}VDMNV;[DP]QH{I|L}MVNP;[DP]QH{I|L}MNVP;[DP]QHV{I|L}MNP;[KT]VP{M(Oxidation (M))|F}DMNV;[NP]EH{I|L}VMNP;[DP]QH{I|L}VMGGP 4.3103;4.0235;3.9225;3.7951;3.6357;3.4679;3.4073;3.2215;3.0931;3.0451 -;-;-;-;-;-;-;-;-;- 3673 + 1 1.633 88355.4 1.0 5450 4639 10075 HBL1_DMSO_200M_050219_2,10091 HBL1_DMSO_200M_050219_2,10091,PGEGHLDNIV False False VPNEHIMNV 54.787094 526.764453113079 5254510.5 10075.0 nc|ENSG00000171634|Q12830|BPTF;;ENSG00000171634|ENST00000306378|BPTF;;nc|ENSG00000171634|Q12830-4|BPTF 0.4776123762130737 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10092 54.79 124.0 490370.0 25 0 56382.0 39277 VACSPAWAL 9 101 459.2325168043279 916.4504806754558 2 459.2325012087822 MULTI CID FTMS 0 0 0 10075 169165.421875 1.0 0 0.0 17 Unmodified _VACSPAWAL_ ENST00000368842.9_1_10:126301864-126302287:+|nuORF 14.581692164780916 0.4419739649577144 4 M 1 9 14.604 0.0 0.0 1.5935 0.0 0.0 767.3991328744777 0.0 767.3991328744777 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.5935 - 173 + 1 1.633 51991.8 1.0 5451 4639 10075 HBL1_DMSO_200M_050219_2,10092 HBL1_DMSO_200M_050219_2,10092,VACSPAWAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10093 54.792 69.0 1039500.0 25 0 101270.0 -1 LPPLECMC 8 78 481.7125591805666 961.4105654279332 2 481.7120544314384 MULTI CID FTMS 0 0 0 10075 149168.0625 0.6261239053947 3 -0.3645401000976562 18 Carbamidomethyl (C) _LPPLEC(Carbamidomethyl (C))MC_ ENST00000380122.9_2_X:16860088-16860244:+|nuORF 6.354104778181461 0.7857632046190106 4 [{I|L}P]P 3 -1 23.952 0.0 0.0 2.4914 0.0 0.0 0.0 651.1976192211552 651.1976192211552 3.0179301183013507 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P]P 2.4914 + + 93 1 1.633 62392.5 1.0 5452 4639 10075 HBL1_DMSO_200M_050219_2,10093 HBL1_DMSO_200M_050219_2,10093,LPPLECMC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10094 54.798 317.0 327290.0 25 0 17719.0 + 22668 LPYSPTKTL 9 148 510.2934045588648 1018.5722561845296 2 510.2956420779228 MULTI CID FTMS 0 0 0 10075 119224.625 0.8396136383067665 -1 0.1303825378417968 19 Unmodified _LPYSPTKTL_ ENSG00000136895|ENST00000373387|GARNL3;nc|ENSG00000136895|Q5VVW2-2|GARNL3;nc|ENSG00000136895|Q5VVW2-3|GARNL3;nc|ENSG00000136895|Q5VVW2-5|GARNL3 67.83816525789305 0.0219346420158844 4 {I|L}PYSTPKT{I|L} 9 2 + 83.075 0.0 0.0 8.156 8.156 93.683 0.0 0.0 0.0 48.55662368767663 19.952359395051715 19.952359395051715 10.769921747127498 0 1.830173315600403 2.0 1.316901560044258 0.0 {I|L}PYSTPKT{I|L};{I|L}PY{[RE]|[WV]}KT{I|L};[{I|L}P]YSTPKT{I|L};[{I|L}P]Y{[RE]|[WV]}KT{I|L};[{I|L}P]Y[DG]K{I|L}T{I|L};[{I|L}P]Y[DG]{I|L}KT{I|L};[H{I|L}]H[RD]KT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}TPKT{I|L};[TP]KS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}T{I|L};[{I|L}P][MT][KC]{I|L}T{I|L} 8.156;7.0986;4.5928;4.4571;4.2102;4.1113;4.0056;3.8069;3.7752;3.6899 -;-;-;-;-;-;-;-;-;- 2093 + 1 1.633 85003.5 1.0 5453 4639 10075 HBL1_DMSO_200M_050219_2,10094 HBL1_DMSO_200M_050219_2,10094,LPYSPTKTL True True LPYSPTKTL 54.798214 510.295642077923 688463.5625 10075.0 nc|ENSG00000136895|Q5VVW2-3|GARNL3;;ENSG00000136895|ENST00000373387|GARNL3;;nc|ENSG00000136895|Q5VVW2-2|GARNL3;;nc|ENSG00000136895|Q5VVW2-5|GARNL3 6.494415918986003 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10095 54.802 207.0 257080.0 25 0 25682.0 11176 GELPTWPTL 9 100 507.2706220420399 1012.5266911508796 2 507.2718078494072 MULTI CID FTMS 0 0 0 10075 128477.3828125 1.0 0 0.0 20 Unmodified _GELPTWPTL_ ENST00000338608.6_1_11:61250210-61254000:+|nuORF;ENST00000432063.6_1_11:61250210-61254000:+|nuORF 16.942295170755138 0.3780752226737986 4 {[DA]|[EG]}VP 4 6 22.14 0.0 0.0 2.1866 0.0 0.0 0.0 627.3265928444922 627.3265928444922 8.384767769392738 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[DA]|[EG]}VP 2.1866 - 157 1 1.633 45422.6 1.0 5454 4639 10075 HBL1_DMSO_200M_050219_2,10095 HBL1_DMSO_200M_050219_2,10095,GELPTWPTL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10097 54.806 6.5 7417600.0 25 0 1219700.0 + + 28608 QPITPGPSI 9 78 455.2555885603596 908.4966241875192 2 455.2559997439384 MULTI CID FTMS 0 0 0 10096 8114149.0 0.4408751814759756 4 -0.4236907958984375 1 Unmodified _PVDKPGPSI_ ENSG00000004487|ENST00000400181|KDM1A;ENST00000602503.1_1_1:23408727-23408946:+|nuORF;nc|ENSG00000004487|O60341|KDM1A 64.23631603340823 0.0237365939569086 4 [{I|L}T]T 3 -1 23.684 0.0 0.0 2.607 0.0 0.0 0.0 590.2937792991004 590.2937792991004 7.063835129833347 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.3494850021680094 0.0 [{I|L}T]T 2.607 - 158 1 1.633 43778.3 1.0 5455 4640 10096 HBL1_DMSO_200M_050219_2,10097 HBL1_DMSO_200M_050219_2,10097,PVDKPGPSI False False QPITPGPSI 54.80646 455.255999743938 1190421504.0 10096.0 ENSG00000004487|ENST00000400181|KDM1A;;ENST00000602503.1_1_1:23408727-23408946:+|nuORF;;nc|ENSG00000004487|O60341|KDM1A 4.871538956960042 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10098 54.808 3.2 24232000.0 25 0 2791900.0 + 4164 DAPHPPLKI 9 74 329.85914441787924 986.5556038538376 3 329.8589965701103 MULTI CID FTMS 0 0 0 10096 17725550.0 0.4632307830131787 -2 0.2433586120605468 2 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 10.823927491677226 0.5436922275383211 4 [{I|L}P]PK 4 6 13.365 0.0 0.0 1.3547 0.0 0.0 0.0 548.2479243159896 548.2479243159896 2.105815430879442 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.0 [{I|L}P]PK 1.3547 - 52 1 1.633 65323.0 1.0 5456 4640 10096 HBL1_DMSO_200M_050219_2,10098 HBL1_DMSO_200M_050219_2,10098,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10099 54.809 2.6 21437000.0 25 0 2286400.0 + 4170 DAPHPPLKI 9 86 494.2848575762056 986.5551622192112 2 494.2852355837822 MULTI CID FTMS 0 0 0 10096 17595802.0 0.4766423134629727 -2 0.2433586120605468 3 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 56.17704186161178 0.0281986971544335 4 {[DA]|[EG]}PHP[{I|L}P]K{I|L} 9 0 + 52.716 0.0 0.0 5.3434 5.3434 86.969 0.0 0.0 0.0 36.2451706760227 8.12002469711765 8.12002469711765 23.737125054200227 0 1.9049471895720984 1.6989700043360187 0.0 0.2396518287104437 + + {[DA]|[EG]}PHP[{I|L}P]K{I|L};{I|L}{[CT]|[{M(Oxidation (M))|F}G]}CP[{I|L}P]K{I|L};{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]P[{I|L}P]K{I|L} 5.3434;2.9374;2.7643 +;-;- + 102 + 1 1.633 51804.6 1.0 5457 4640 10096 HBL1_DMSO_200M_050219_2,10099 HBL1_DMSO_200M_050219_2,10099,DAPHPPLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10100 54.81 8.4 6540700.0 25 0 1470100.0 + 15068 IMHIQSNFL 9 85 368.19447723393614 1101.5616023020084 3 368.1941711306572 MULTI CID FTMS 0 0 0 10096 5774223.0 0.5987400192680246 19 -1.8607330322265625 4 Unmodified _IMHIQSNFL_ REV__ENSG00000157578|ENST00000288350|LCA5L 12.531546534597751 0.4974689918368763 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PG][PA]QE 8 -1 20.736 0.0 0.0 1.8824 0.0 0.0 0.0 275.14000381161253 275.14000381161253 6.131674952134105 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2614393726401688 0.9247425010840048 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PG][PA]QE 1.8824 - 117 1 1.633 48991.1 1.0 5458 4640 10096 HBL1_DMSO_200M_050219_2,10100 HBL1_DMSO_200M_050219_2,10100,IMHIQSNFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10101 54.811 16.0 3651100.0 25 0 556210.0 + 21891 LPPEVNRI 8 57 469.27679076482383 936.5390285964476 2 469.2771179080009 MULTI CID FTMS 0 0 0 10096 3365183.5 0.3773377687445911 16 -1.5267448425292969 5 Unmodified _LPPEVNRI_ ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 14.838274106304384 0.6917062315640577 4 {I|L}PPE 4 4 53.175 0.0 0.0 5.6779 0.0 0.0 0.0 497.2840975397094 497.2840975397094 46.18562527100117 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPE 5.6779 + + 32 + 1 1.633 49862.6 1.0 5459 4640 10096 HBL1_DMSO_200M_050219_2,10101 HBL1_DMSO_200M_050219_2,10101,LPPEVNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10102 54.812 18.0 2853200.0 25 0 285080.0 + 10021 FPLSCIYFL 9 82 551.7875691100098 1101.5605852868196 2 551.7878295779228 MULTI CID FTMS 0 0 0 10096 3225949.0 0.6888239010725623 19 -1.8607330322265625 6 Unmodified _FPLSCIYFL_ REV__ENSG00000119714|ENST00000650645|GPR68 21.74664581756881 0.2544899275067181 4 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[YK]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 -1 + 32.172 0.0 0.0 2.9206 2.9206 75.454 0.0 0.0 0.0 11.202972028968716 0.0924446688467952 0.0924446688467952 9.262137858390812 0 0.0 0.0 0.5 0.3807196863200844 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[YK]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[YK][AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}H]|[RQ]}[KG][QP]E{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[H{I|L}]{[DS]|[MA]|[CV]|TT}E{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[H{I|L}]{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}{I|L}E;{[QN]|[E{I|L}]|[KN]}[H{I|L}]{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[KG][QP]{M(Oxidation (M))|F}{I|L}E;{[{M(Oxidation (M))|F}H]|[RQ]}[KG][QP]{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[WP][KG]PE;{[QN]|[E{I|L}]|[KN]}[H{I|L}][WY]{I|L}E 2.9206;2.0798;2.0287;1.7555;1.7185;1.6628;1.5379;1.4822;1.4157;0.78481 -;-;-;-;-;-;-;-;-;- 236 + 1 1.633 44682.4 1.0 5460 4640 10096 HBL1_DMSO_200M_050219_2,10102 HBL1_DMSO_200M_050219_2,10102,FPLSCIYFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10103 54.814 15.0 3048600.0 25 0 545150.0 + 25770 NIVHDLPAA 9 79 475.257042426124 948.499531919048 2 475.2571288943291 MULTI CID FTMS 0 0 0 10096 2802490.0 0.8585541207719601 -1 0.11297607421875 7 Unmodified _NIVHDLPAA_ ENSG00000183527|ENST00000331573|PSMG1;ENST00000411828.5_1_21:40547518-40555177:-|nuORF;nc|ENSG00000183527|O95456-2|PSMG1 25.399314129420983 0.2080152500878129 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}N{I|L}[W{M(Oxidation (M))|F}] 7 8 + 37.491 0.0 0.0 3.9527 3.9527 75.788 0.0 0.0 0.0 22.887050800742585 3.590219426416681 3.590219426416681 8.305300040193018 0 0.5 0.0 0.0 0.3494850021680094 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}N{I|L}[W{M(Oxidation (M))|F}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W{I|L}[R{M(Oxidation (M))|F}]A;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}W[R{M(Oxidation (M))|F}]A;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GG{I|L}[W{M(Oxidation (M))|F}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[DA]|[EG]}{I|L}[R{M(Oxidation (M))|F}]A;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[DA]|[EG]}[R{M(Oxidation (M))|F}]A;{[RE]|[WV]}[KA]{I|L}[W{M(Oxidation (M))|F}];{[RE]|[WV]}RR[W{M(Oxidation (M))|F}] 3.9527;3.0771;2.9466;2.6005;2.0933;1.9629;1.0802;0.41386 -;-;-;-;-;-;-;- 263 + 1 1.633 41084.6 1.0 5461 4640 10096 HBL1_DMSO_200M_050219_2,10103 HBL1_DMSO_200M_050219_2,10103,NIVHDLPAA False True NIVHDLPAA 54.813531 475.257128894329 33411094.0 10096.0 ENST00000411828.5_1_21:40547518-40555177:-|nuORF;;nc|ENSG00000183527|O95456-2|PSMG1;;ENSG00000183527|ENST00000331573|PSMG1 5.799941062927246 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10104 54.815 22.0 2000500.0 25 0 195930.0 + 36149 SVVDHFNRI 9 66 543.7881596847484 1085.5617664362967 2 543.7883788943291 MULTI CID FTMS 0 0 0 10096 2023387.75 0.3653059686200381 2 -0.2515640258789062 8 Unmodified _SVVDHFNRI_ ENSG00000103035|ENST00000219313|PSMD7;ENST00000422197.2_1_1:51837944-51838202:+|nuORF;ENST00000566015.1_1_16:74330767-74334139:+|nuORF 17.11289562659939 0.3734572693229295 4 [VS]VDH{M(Oxidation (M))|F} 6 3 52.664 0.0 0.0 4.8513 0.0 0.0 0.0 398.2167147272094 398.2167147272094 36.46591250700361 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [VS]VDH{M(Oxidation (M))|F} 4.8513 + + 49 + 1 1.633 41952.3 1.0 5462 4640 10096 HBL1_DMSO_200M_050219_2,10104 HBL1_DMSO_200M_050219_2,10104,SVVDHFNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10105 54.816 29.0 2452800.0 25 0 229550.0 + 22649 LPYQIKKI 8 82 501.8208773277146 1001.6272017222292 2 501.8208190798759 MULTI CID FTMS 0 0 0 10096 1939519.5 0.7158206679652435 -1 0.11297607421875 9 Unmodified _LPYQIKKI_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 77.98433622928108 0.1005472218284828 4 {I|L}PYQ{I|L}KK{I|L} 8 0 + 86.975 0.0 0.0 8.6834 8.6834 93.739 0.0 0.0 0.0 62.53791702357354 12.184290373512042 12.184290373512042 9.262137858390815 0 1.5 2.0 0.0 0.6549471895720985 + + {I|L}PYQ{I|L}KK{I|L};{I|L}PY[AG]{I|L}KK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}KK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[AG]{I|L}KK{I|L} 8.6834;7.7587;6.1619;5.2372 +;-;-;- + 501 + 1 1.633 60277.4 1.0 5463 4640 10096 HBL1_DMSO_200M_050219_2,10105 HBL1_DMSO_200M_050219_2,10105,LPYQIKKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10106 54.817 31.0 1555100.0 25 0 89162.0 + 30656 RFPDGTNGL 9 93 488.7464410504657 975.4783291677312 2 488.7465392947197 MULTI CID FTMS 0 0 0 10096 1388634.75 0.9037445953865664 3 -0.3326416015625 10 Unmodified _RFPDGTNGL_ ENSG00000164442|ENST00000367651|CITED2;nc|ENSG00000164442|Q99967-2|CITED2 31.26834338654808 0.1333407332142048 4 [R{M(Oxidation (M))|F}][DP]GTNG{I|L} 9 0 + 47.246 0.0 0.0 4.8433 4.8433 75.984 0.0 0.0 0.0 3.925449767853309 37.24575494965889 3.925449767853309 5.041040065556494 0 0.8494850021680094 0.0 0.2887254899964357 0.0 + + [R{M(Oxidation (M))|F}][DP]GTNG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}WNG{I|L};[NG]{I|L}[KC]GTNG{I|L};[R{M(Oxidation (M))|F}][DP]GTGGG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}WGGG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}{[DA]|[EG]}NG{I|L};[NG]{I|L}[C(Carbamidomethyl (C))K]TNG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}NG{I|L};[NG]{I|L}[KC]GTGGG{I|L};[R{M(Oxidation (M))|F}][PS]{[DA]|[EG]}NG{I|L} 4.8433;4.3266;3.9975;3.8994;3.3771;3.3771;3.3278;3.1829;3.058;2.9222 +;-;-;-;-;-;-;-;-;- + 399 1 1.633 41049.7 1.0 5464 4640 10096 HBL1_DMSO_200M_050219_2,10106 HBL1_DMSO_200M_050219_2,10106,RFPDGTNGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10107 54.818 35.0 1209800.0 25 0 56780.0 + 25858 NLEFNKAQL 9 80 538.7892747984347 1075.5639966636693 2 538.7886840701103 MULTI CID FTMS 0 0 0 10096 1201317.75 0.8687594543449715 1 -0.093353271484375 11 Unmodified _NLEFNKAQL_ REV__ENSG00000106246|ENST00000292478|PTCD1 13.042465956692816 0.4836390050082244 4 {[QV]|[N{I|L}]|[RA]|[KV]}TPE 5 -1 36.937 0.0 0.0 3.4342 0.0 0.0 0.0 518.2729586236936 518.2729586236936 23.44212497064703 0.0 0.0 0.0 0 0.25 1.2218487496163564 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}TPE 3.4342 - 94 + 1 1.633 38181.6 1.0 5465 4640 10096 HBL1_DMSO_200M_050219_2,10107 HBL1_DMSO_200M_050219_2,10107,NLEFNKAQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10108 54.82 57.0 1640100.0 25 0 287240.0 + 44656 YPFKPPKV 8 80 325.86056900573425 974.5598776174028 3 325.8603698611259 MULTI CID FTMS 0 0 0 10096 963683.5625 0.0149345481912941 -35 2.733970642089844 12 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 51.385 0.0 0.0 5.2727 5.2727 87.461 0.0 0.0 0.0 27.48441900057003 4.921525057367404 4.921525057367404 36.88670047696206 0 0.2614393726401688 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[HG]|PP}KK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T][KP]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.2727;1.4877;1.4001;0.72987;0.37403 +;-;-;-;- + 211 + 1 1.633 82722.3 1.0 5466 4640 10096 HBL1_DMSO_200M_050219_2,10108 HBL1_DMSO_200M_050219_2,10108,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10109 54.824 221.0 360080.0 25 0 43108.0 + -1 YFYGGLMTTQF 11 76 672.3042163728708 1342.5938798125414 2 672.3049194216728 MULTI CID FTMS 0 0 0 10096 378906.3125 0.6996164313878633 5 -0.5086746215820312 13 Oxidation (M) _YFYGGLM(Oxidation (M))TTQF_ REV__ENSG00000156006|ENST00000286479|NAT2 29.081581746732265 0.4093582134107448 4 MQQ{M(Oxidation (M))|F}GNQ{M(Oxidation (M))|F} 8 -1 39.122 0.0 0.0 2.9139 0.0 0.0 344.18377210741727 0.0 344.18377210741727 0.0 12.56752609342385 0.0 0.0 0 0.7742275032520141 0.0 0.0 1.1861818737241734 MQQ{M(Oxidation (M))|F}GNQ{M(Oxidation (M))|F} 2.9139 - 204 + 1 1.633 63395.3 1.0 5467 4640 10096 HBL1_DMSO_200M_050219_2,10109 HBL1_DMSO_200M_050219_2,10109,YFYGGLMTTQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10110 54.834 551.0 452070.0 25 0 35923.0 + 12395 SALGITAGAHRL 12 171 583.8359581537514 1165.6573633743028 2 583.8361083865166 MULTI CID FTMS 0 0 0 10096 363117.78125 0.86392931936258 -1 0.11297607421875 14 Unmodified _GTIGIFWFLL_ ENSG00000099194|ENST00000370355|SCD 57.47134341890925 0.0432192961576344 4 {[SA]|[TG]}{I|L}G{I|L}TAG[HV]{I|L}Q 12 6 + 98.81 0.0 0.0 8.4767 8.4767 88.247 0.0 0.0 0.0 19.665762445130497 5.491993127068753 5.491993127068753 5.491993127068753 0 1.6549471895720984 1.2218487496163564 0.7302046884880937 1.1549471895720984 {[SA]|[TG]}{I|L}G{I|L}TAG[HV]{I|L}Q;{[SA]|[TG]}{I|L}G{I|L}TAGAHR{I|L};{[SA]|[TG]}{I|L}G{I|L}TA{I|L}[RH]Q;{[SA]|[TG]}{I|L}G{I|L}TA[RH]{I|L}Q;{[SA]|[TG]}{I|L}G{I|L}TQ[HV]{I|L}Q;{[SA]|[TG]}{I|L}G{I|L}TQAHR{I|L};{[SA]|[TG]}{I|L}G{I|L}TAQHR{I|L};{[SA]|[TG]}{I|L}G{I|L}T{I|L}[HN]{I|L}Q;{[SA]|[TG]}{I|L}G{I|L}T{I|L}A[RH]Q;{[SA]|[TG]}{I|L}G{I|L}{I|L}TA[RH]Q 8.4767;8.0056;7.9095;7.9095;7.9095;7.4384;7.4384;7.0909;7.0909;6.8364 -;-;-;-;-;-;-;-;-;- 7507 + 1 1.633 184298.8 1.0 5468 4640 10096 HBL1_DMSO_200M_050219_2,10110 HBL1_DMSO_200M_050219_2,10110,GTIGIFWFLL True False SALGITAGAHRL 54.833543 583.836108386517 3145211.25 10096.0 ENSG00000099194|ENST00000370355|SCD 6.340030193328857 2.0 False 12.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10111 54.844 606.0 311100.0 25 0 114540.0 -1 0 100 613.3571484354682 612.3498719688681 1 613.3561889529228 MULTI CID FTMS 0 0 0 10096 311370.5625 0.9597903381141796 1 -0.093353271484375 15 4 [{I|L}A]{I|L}P{[CP]|[EA]} 6 -1 + 55.423 0.0 0.0 9.0509 9.0509 89.689 0.0 0.0 0.0 11.73393743112328 6.100196051752072 6.100196051752072 6.100196051752072 0 1.274227503252014 1.6989700043360187 1.079689690656103 0.0 [{I|L}A]{I|L}P{[CP]|[EA]};[{I|L}A]{I|L}A[EP];[{I|L}A]P{I|L}{[CP]|[EA]};[{I|L}A]PE[{I|L}A];[EP]A{I|L}[{I|L}A];[{I|L}A]PN[KA];[EP]{I|L}A[{I|L}A];[{I|L}P]A{I|L}{[CP]|[EA]};[{I|L}A]PGG[KA];[{I|L}P]EA[{I|L}A] 9.0509;8.0547;5.539;4.5486;4.0654;3.8987;3.8614;2.4685;2.3604;1.7657 -;-;-;-;-;-;-;-;-;- 161 + 1 1.633 141683.4 1.0 5469 4640 10096 HBL1_DMSO_200M_050219_2,10111 HBL1_DMSO_200M_050219_2,10111, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10112 54.856 707.0 183930.0 25 0 11725.0 -1 0 106 881.9127461829552 1761.8109394327105 2 882.4138061404228 MULTI CID FTMS 0 0 0 10096 270186.78125 0.264202011240869 -8 0.6832466125488281 16 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEA[KC]WW{I|L}Q 14 -1 + 60.605 0.0 0.0 3.4399 3.4399 69.099 0.0 0.0 0.0 15.850394929564544 3.856150930823148 3.856150930823148 3.564921830680703 0 0.8807196863200843 0.0 0.3807196863200844 1.3411290632962718 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEA[KC]WW{I|L}Q;EEVD{I|L}NEA[KC]WW{I|L}Q;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}QAEN{I|L}DV[HC];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[ET]|[MV]}[{I|L}P]QAEN{I|L}DV[HC];[NP]{I|L}N[KC]PRD{M(Oxidation (M))|F}GYV[HC];EEVD{I|L}NEA[KC]RR[WD];[NP]{I|L}NE[QA]RD{M(Oxidation (M))|F}G{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N[KC]PRD{M(Oxidation (M))|F}G{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}NE[C(Carbamidomethyl (C))H]RR{I|L}DV[HC];[NP]{I|L}N[KC]PRD{M(Oxidation (M))|F}G{I|L}MEE 3.4399;3.2376;2.493;2.4221;2.2276;2.1683;2.1044;2.1044;2.0234;1.9785 -;-;-;-;-;-;-;-;-;- 1148 + 1 1.633 90585.1 1.0 5470 4640 10096 HBL1_DMSO_200M_050219_2,10112 HBL1_DMSO_200M_050219_2,10112, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10113 54.863 369.0 382210.0 25 0 71879.0 + 19564 LFRVEKIID 9 149 378.2272490564853 0 378.2272827029228 PEAK CID FTMS 0 0 0 10096 259421.5625 1.0 0 0.0 17 Unmodified _LFRVEKIID_ REV__ENSG00000149930|ENST00000308893|TAOK2;REV__nc|ENSG00000149930|Q9UL54-2|TAOK2;REV__nc|ENSG00000149930|Q9UL54-4|TAOK2 5.296884461304476 0.3444685223463735 4 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.72697 0.0 0.0 522.2817400789878 82.06699548892811 604.3487355679159 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.72697 + + 29 + 1 1.633 112672.5 1.0 5471 4640 10096 HBL1_DMSO_200M_050219_2,10113 HBL1_DMSO_200M_050219_2,10113,LFRVEKIID False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10114 54.867 189.0 636840.0 25 0 59606.0 + 21759 LPMKVRAL 8 121 464.2941682419009 926.573783550602 2 464.2944213747978 MULTI CID FTMS 0 0 0 10096 238589.9375 0.8428433562459389 -1 0.11297607421875 18 Unmodified _LPMKVRAL_ ENSG00000105364|ENST00000253099|MRPL4;nc|ENSG00000105364|Q9BYD3-2|MRPL4 24.67388899826682 0.525179942228231 4 {I|L}PMK 4 4 54.412 0.0 0.0 5.8724 0.0 0.0 0.0 454.2803808318356 454.2803808318356 41.313506577119625 0.0 0.0 0.0 0 0.6989700043360187 1.6989700043360187 0.0 0.0 + {I|L}PMK 5.8724 + + 285 + 1 1.633 96043.1 1.0 5472 4640 10096 HBL1_DMSO_200M_050219_2,10114 HBL1_DMSO_200M_050219_2,10114,LPMKVRAL False True LPMKVRAL 54.866724 464.294421374798 1872106.75 10096.0 nc|ENSG00000105364|Q9BYD3-2|MRPL4;;ENSG00000105364|ENST00000253099|MRPL4 3.8114302158355713 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10115 54.882 800.0 283600.0 25 0 26957.0 + 39532 VAVLVQRV 8 216 442.2898199663253 882.5650869994506 2 442.2900878787041 MULTI CID FTMS 0 0 0 10096 175199.875 1.0 0 0.0 19 Unmodified _VAVLVQRV_ ENSG00000188647|ENST00000340434|PTAR1;ENST00000474925.2_1_9:72356652-72374854:-|nuORF 63.562846038646086 0.116059504757595 4 VAV{I|L}VQRV 8 0 + 74.52 0.0 0.0 8.4436 8.4436 82.368 0.0 0.0 0.0 29.82744192592139 5.010308442229572 5.010308442229572 1.7651975270945428 0 1.4715141619232908 1.6989700043360187 0.0 0.3252574989159953 + + VAV{I|L}VQRV;VAV{I|L}VRQV;VAV{I|L}VRAGV;VAV{I|L}VRN{I|L};VAVV{I|L}QRV;VAVV{I|L}RQV;VAV{I|L}V[AG]RV;VAVV{I|L}RAGV;VAVV{I|L}RN{I|L};VAV{I|L}VRGG{I|L} 8.4436;8.2436;7.9042;7.8759;7.734;7.534;7.3941;7.1946;7.1663;6.7106 +;-;-;-;-;-;-;-;-;- + 948 + 1 1.633 175836.6 0.8500000238418579 5473 4640 10096 HBL1_DMSO_200M_050219_2,10115 HBL1_DMSO_200M_050219_2,10115,VAVLVQRV True True VAVLVQRV 54.881714 442.290087878704 1194438.0 10096.0 ENST00000474925.2_1_9:72356652-72374854:-|nuORF;;ENSG00000188647|ENST00000340434|PTAR1 5.794422467549642 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10116 54.896 800.0 242020.0 25 0 14453.0 + 43193 VYWVARKPM 9 179 575.3152977068776 1148.616042480555 2 575.3173705935478 MULTI CID FTMS 0 0 0 10096 171744.734375 1.0 0 0.0 20 Unmodified _VYWVARKPM_ ENSG00000137038|ENST00000358227|DMAC1;nc|ENSG00000137038|Q96GE9|DMAC1 41.95555342248728 0.0647214845423414 4 VYWVARKMP 9 2 + 74.461 0.0 0.0 6.4827 6.4827 83.558 0.0 0.0 0.0 62.31608586905513 7.82516055786094 7.82516055786094 5.95561255036381 0 1.2302046884880935 2.0 0.0 0.0 VYWVARKMP;VY{[DA]|[EG]}VARKMP;VYWVA[VG]KMP;VYWVA{[CA]|SS}KP{I|L};VYWVA{[CA]|SS}K{I|L}P;VYWV[Y{I|L}]PP{I|L};VYWV[Y{I|L}]P{I|L}P;VYWKK[TP]MP;VYWV[H{I|L}][VS]{M(Oxidation (M))|F};VYWV{[HG]|PP}G[KG]{M(Oxidation (M))|F} 6.4827;5.9642;5.681;4.8023;4.7847;4.7601;4.7425;4.6876;4.4912;4.4537 -;-;-;-;-;-;-;-;-;- 973 + 1 1.633 148860.3 0.8899999856948853 5474 4640 10096 HBL1_DMSO_200M_050219_2,10116 HBL1_DMSO_200M_050219_2,10116,VYWVARKPM True True VYWVARKPM 54.895545 575.317370593548 28125471.5 10096.0 nc|ENSG00000137038|Q96GE9|DMAC1;;ENSG00000137038|ENST00000358227|DMAC1 5.138619502385457 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10118 54.9 21.0 1756700.0 25 0 175050.0 43528 WWWWIWWQWW 10 42 874.9041028402406 1747.7936527472812 2 875.4058715701103 MULTI CID FTMS 0 0 0 10117 2447648.5 0.841165680082431 1 -0.1582107543945312 1 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 4 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 8 25.635 0.0 0.0 1.4667 0.0 0.0 862.4315762001872 0.0 862.4315762001872 0.0 7.631740484369232 0.0 0.0 0 0.5 0.0 0.0 0.0 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 1.4667 - 43 1 1.619 32688.1 1.0 5475 4641 10117 HBL1_DMSO_200M_050219_2,10118 HBL1_DMSO_200M_050219_2,10118,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 10119 54.901 34.0 4910200.0 25 0 948760.0 -1 0 83 401.2528936708007 800.4912344084014 2 401.2528564333916 MULTI CID FTMS 0 0 0 10117 2139647.5 0.9006562930309183 -1 0.093353271484375 2 4 PHPP{I|L}K{I|L} 7 -1 + 75.345 0.0 0.0 9.4124 9.4124 88.122 0.0 0.0 0.0 31.54901959985743 5.051499783199063 5.051499783199063 4.528937514676485 0 1.8129529932484496 1.5228787452803376 0.0 0.2302046884880938 PHPP{I|L}K{I|L};PHP{I|L}PK{I|L};PHPP{I|L}{I|L}K;PH{I|L}PPK{I|L};PHP{I|L}P{I|L}K;PH{I|L}PP{I|L}K 9.4124;8.8466;8.7814;8.63;8.2156;7.999 -;-;-;-;-;- 168 + 1 1.619 132338.3 1.0 5476 4641 10117 HBL1_DMSO_200M_050219_2,10119 HBL1_DMSO_200M_050219_2,10119, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10120 54.902 33.0 1944300.0 25 0 355520.0 + 40556 VKEQLANYV 9 70 532.2929079530511 1062.571262972902 2 532.2931396365166 MULTI CID FTMS 0 0 0 10117 1913497.0 0.2329585132317234 -2 0.206329345703125 3 Unmodified _VKEQLANYV_ REV__ENSG00000165660|ENST00000298492|ABRAXAS2 13.90604991867851 0.4602628045680013 4 PV{I|L}YV 5 -1 41.186 0.0 0.0 3.876 0.0 0.0 473.2184010236344 0.0 473.2184010236344 0.0 31.72167511924052 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 PV{I|L}YV 3.876 - 84 1 1.619 55975.4 1.0 5477 4641 10117 HBL1_DMSO_200M_050219_2,10120 HBL1_DMSO_200M_050219_2,10120,VKEQLANYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10121 54.903 42.0 1177900.0 25 0 265610.0 + 21126 LPAPNTATVV 10 79 491.78182291101695 981.549092888834 2 491.7827026247978 MULTI CID FTMS 0 0 0 10117 1155343.75 0.7919770545796886 -1 0.093353271484375 4 Unmodified _LPAPNTATVV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 49.93300154707207 0.0805441195901191 4 [{I|L}P]A[NP]TATVV 10 0 + 34.949 0.0 0.0 3.5606 3.5606 68.292 0.0 0.0 0.0 3.925449767853309 19.464490642464227 3.925449767853309 3.0102999566398125 0 0.8182503180159344 1.5228787452803376 1.1237125054200234 0.0 + + [{I|L}P]A[NP]TATVV;[{I|L}P]AQ[PS]ATVV;[NP][PA]{I|L}TATVV;[{I|L}P]A[AG][PS]ATVV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VVTATVV;[NP]T[PG]VVTVV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ATVVTVV;[PS]Q[PG]VVTVV;[NP][PA]SVVTVV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A[VS]{I|L}TVV 3.5606;3.2539;2.8825;2.3202;2.3158;1.8923;1.7121;1.5856;1.5362;1.4054 +;-;-;-;-;-;-;-;-;- + 231 1 1.619 40306.1 1.0 5478 4641 10117 HBL1_DMSO_200M_050219_2,10121 HBL1_DMSO_200M_050219_2,10121,LPAPNTATVV True True LPAPNTATVV 54.903372 491.782702624798 13839062.0 10117.0 nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;;ENSG00000171681|ENST00000261168|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;;ENST00000537653.5_1_12:14576849-14628955:+|nuORF 5.391297976175944 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10122 54.906 111.0 687740.0 25 0 72894.0 + 43191 VYWVARKPM 9 89 383.8794480713171 1148.6165148141513 3 383.8794738650322 MULTI CID FTMS 0 0 0 10117 490794.1875 0.883733055617952 1 -0.1582107543945312 5 Unmodified _VYWVARKPM_ ENSG00000137038|ENST00000358227|DMAC1;nc|ENSG00000137038|Q96GE9|DMAC1 38.17557092003332 0.0854718145212029 4 VYWV{M(Oxidation (M))|F}K 6 4 70.821 0.0 0.0 6.1657 0.0 0.0 0.0 323.18305383853755 323.18305383853755 63.83085333508717 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.75 VYWV{M(Oxidation (M))|F}K 6.1657 - 167 + 1 1.619 73492.5 1.0 5479 4641 10117 HBL1_DMSO_200M_050219_2,10122 HBL1_DMSO_200M_050219_2,10122,VYWVARKPM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10123 54.908 117.0 516270.0 25 0 61918.0 + 44842 YPNYPNPAV 9 87 517.7509700262003 1033.4873871192003 2 517.7512695193291 MULTI CID FTMS 0 0 0 10117 467560.71875 0.9426629769815972 1 -0.1582107543945312 6 Unmodified _YPNYPNPAV_ ENSG00000129173|ENST00000250024|E2F8 36.04419817259434 0.0971720506436186 4 [{I|L}T]C(Carbamidomethyl (C))YPN 6 6 40.081 0.0 0.0 3.8782 0.0 0.0 0.0 282.1452259772198 282.1452259772198 15.28251620415741 0.0 0.0 0.0 0 0.4247425010840047 0.958607314841775 0.2614393726401688 0.4247425010840047 [{I|L}T]C(Carbamidomethyl (C))YPN 3.8782 - 426 1 1.619 58378.6 1.0 5480 4641 10117 HBL1_DMSO_200M_050219_2,10123 HBL1_DMSO_200M_050219_2,10123,YPNYPNPAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10124 54.91 94.0 590540.0 25 0 65513.0 + 22748 LQLNINWI 8 87 507.29145345278056 1012.5683539723613 2 507.2916442751884 MULTI CID FTMS 0 0 0 10117 449513.5625 0.4594742462297512 -1 0.093353271484375 7 Unmodified _LQLNINWI_ REV__ENSG00000197448|ENST00000358406|GSTK1;REV__ENST00000473649.1_1_7:142960606-142961786:+|nuORF;REV__ENST00000489654.1_1_7:142960606-142961286:+|nuORF;REV__nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;REV__nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;REV__nc|ENSG00000197448|Q9Y2Q3-4|GSTK1 24.67388899826682 0.525179942228231 4 {I|L}Q{I|L}D 4 -1 47.467 0.0 0.0 4.6877 0.0 0.0 0.0 540.2902850726464 540.2902850726464 34.99236983833846 0.0 0.0 0.0 0 0.5 0.8538719643217619 0.0 0.5 {I|L}Q{I|L}D 4.6877 - 58 + 1 1.619 50498.8 1.0 5481 4641 10117 HBL1_DMSO_200M_050219_2,10124 HBL1_DMSO_200M_050219_2,10124,LQLNINWI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10125 54.921 617.0 396470.0 25 0 40351.0 + -1 RAWPSMKL 8 198 515.7803887000345 1029.5462244668688 2 515.2775756716728 MULTI CID FTMS 0 0 0 10117 320257.8125 1.0 0 0.0 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RAWPSMKL_ REV__ENST00000578676.5_1_17:80007792-80008608:-|nuORF 18.13498045792455 0.6430038125133779 4 [TP]AGNHA{I|L}H{I|L} 10 -1 + 32.31 0.0 0.0 3.1383 3.1383 64.35 0.0 0.0 0.0 8.589902129039867 1.336184509224946 1.336184509224946 1.5490195998574308 0 0.1331596456423734 0.0 0.0 1.0044321917401078 [TP]AGNHA{I|L}H{I|L};[TP]AGNHA{I|L}{I|L}H;VVAG[HT][KG]YV;[TP]QNHA{I|L}H{I|L};VVAGWVRP{M(Oxidation (M))|F};[TP]QNHA{I|L}{I|L}H;VVAGWKK{[QD]|[EN]|[WG]|[KD]|[RS]};[TP]AGWV[R{I|L}]M;[TP]A{I|L}AWWSV;VVAG[TP][QP]YV 3.1383;2.9879;2.2284;2.2072;2.1483;2.0567;1.923;1.8727;1.8191;1.8146 -;-;-;-;-;-;-;-;-;- 3364 + 1 1.619 189782.6 1.0 5482 4641 10117 HBL1_DMSO_200M_050219_2,10125 HBL1_DMSO_200M_050219_2,10125,RAWPSMKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10126 54.923 119.0 505620.0 25 0 24832.0 + + -1 NMAEGFRTV 9 100 511.7444852532993 1021.4744175733986 2 512.7473022341728 MULTI CID FTMS 0 0 0 10117 303444.5625 0.9767814101598796 -1 0.093353271484375 9 Carbamidomethyl (C) _MNALFC(Carbamidomethyl (C))LGP_ ENSG00000111331|ENST00000228928|OAS3 12.531546534597751 0.4974689918368763 4 [MN]A 3 -1 31.184 0.0 0.0 3.0529 0.0 0.0 0.0 702.3303190228704 702.3303190228704 4.017412290202671 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.6747425010840047 [MN]A 3.0529 + + 74 1 1.619 51251.2 1.0 5483 4641 10117 HBL1_DMSO_200M_050219_2,10126 HBL1_DMSO_200M_050219_2,10126,MNALFCLGP False False NMAEGFRTV 54.923464 512.747302234173 4859287.0 10117.0 ENSG00000111331|ENST00000228928|OAS3 6.307774702707927 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10127 54.929 330.0 507340.0 25 0 48017.0 + 3041 AVLDRMHSL 9 158 347.85536419867736 1040.544263196232 3 347.8549682497978 MULTI CID FTMS 0 0 0 10117 266018.75 0.0930057442732078 -2 0.206329345703125 10 Unmodified _AVLDRMHSL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 68.08070601005525 0.0218408846571049 4 AVQQV[PA]ES{I|L} 10 6 + 71.532 0.0 0.0 6.8745 6.8745 84.509 0.0 0.0 0.0 17.041403925781026 1.2177800564282393 1.2177800564282393 5.40455756051189 0 0.3252574989159953 2.0 1.4634679910804405 0.0 AVQQV[PA]ES{I|L};AV{I|L}[C(Carbamidomethyl (C))N][HK]S{I|L};AVQQV[PA]ETV;AV{I|L}[C(Carbamidomethyl (C))N][HK]TV;AVQQM[HK]S{I|L};{NN|[MP]|[D{I|L}]|[EV]}RMHS{I|L}VA;AV{M(Oxidation (M))|F}VHVV[RD];AVQQM[HK]TV;{NN|[MP]|[D{I|L}]|[EV]}RMHSV{I|L}A;{[TV]|[{I|L}S]}[HS]S{I|L}D{I|L}VA 6.8745;6.3551;6.2198;5.7004;5.4279;4.9132;4.8611;4.7732;4.4547;4.1546 -;-;-;-;-;-;-;-;-;- 1716 + 1 1.619 144798.5 1.0 5484 4641 10117 HBL1_DMSO_200M_050219_2,10127 HBL1_DMSO_200M_050219_2,10127,AVLDRMHSL True True AVLDRMHSL 54.929437 347.854968249798 46629792.0 10117.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 7.215646584828694 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10128 54.943 800.0 291680.0 25 0 29168.0 + 44504 YPATEHRDLLV 11 189 438.5665808046038 1312.6779130140114 3 438.5663329958916 MULTI CID FTMS 0 0 0 10117 184827.140625 0.6439261906083935 -1 0.093353271484375 11 Unmodified _YPATEHRDLLV_ ENSG00000138180|ENST00000371485|CEP55 36.95490438235368 0.2593041297346161 4 YPATEH 6 5 50.979 0.0 0.0 3.8836 0.0 0.0 0.0 611.3543369602489 611.3543369602489 19.86440033737999 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3807196863200844 0.0 + YPATEH 3.8836 + + 4711 + 1 1.619 181296.7 0.8999999761581421 5485 4641 10117 HBL1_DMSO_200M_050219_2,10128 HBL1_DMSO_200M_050219_2,10128,YPATEHRDLLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10129 54.956 756.0 223180.0 25 0 10793.0 + 44506 YPATEHRDLLV 11 149 657.3461492595684 1312.6777455859367 2 657.3456909060478 MULTI CID FTMS 0 0 0 10117 178808.375 0.7711500218567179 -3 0.3367118835449219 12 Unmodified _YPATEHRDLLV_ ENSG00000138180|ENST00000371485|CEP55 52.73520976341228 0.1024824755729687 4 YPATEH 6 5 72.626 0.0 0.0 5.5326 0.0 0.0 0.0 611.3580416315061 611.3580416315061 29.94408963409274 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.5994850021680094 0.0 + YPATEH 5.5326 + + 2380 + 1 1.619 129049.9 1.0 5486 4641 10117 HBL1_DMSO_200M_050219_2,10129 HBL1_DMSO_200M_050219_2,10129,YPATEHRDLLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10130 54.963 369.0 333600.0 25 0 40946.0 + 10789 FYQDKLKSL 9 152 381.2128410240971 0 381.2126342654228 PEAK CID FTMS 0 0 0 10117 182866.890625 1.0 0 0.0 13 Unmodified _FYQDKLKSL_ ENSG00000162402|ENST00000294383|USP24 27.088373467376528 0.1368127342934387 4 DK 2 7 11.638 0.0 0.0 1.5305 0.0 0.0 57.98093382547979 456.2850435846313 514.2659774101111 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + DK 1.5305 + + 66 + 1 1.619 100219.9 1.0 5487 4641 10117 HBL1_DMSO_200M_050219_2,10130 HBL1_DMSO_200M_050219_2,10130,FYQDKLKSL False True FYQDKLKSL 54.962993 381.212634265423 1387042.0 10117.0 ENSG00000162402|ENST00000294383|USP24 4.845893541971843 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10131 54.977 800.0 110380.0 25 0 6460.5 + -1 REKQWCHLMLQ 11 121 744.3651611208916 0 744.3651611208916 PEAK CID FTMS 0 0 0 -1 0 14 Oxidation (M) _REKQWCHLM(Oxidation (M))LQ_ REV__ENSG00000080224|ENST00000389672|EPHA6;REV__nc|ENSG00000080224|Q9UF33|EPHA6 17.44264345198275 0.3815305483796679 4 N{I|L}NADQ 6 -1 44.791 0.0 0.0 3.0127 0.0 0.0 97.05719307517424 731.3480929010374 828.4052859762116 0.0 0.0 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.805462187404089 N{I|L}NADQ 3.0127 - 1468 + 1 1.619 66168.7 0.9700000286102296 5488 4641 10117 HBL1_DMSO_200M_050219_2,10131 HBL1_DMSO_200M_050219_2,10131,REKQWCHLMLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10132 54.992 800.0 230800.0 25 0 22738.0 + 12125 GQISDRPSLSV 11 171 579.8082132005682 1157.6018734679362 2 579.8083373904228 MULTI CID FTMS 0 0 0 10117 167181.09375 0.3833797849780455 -1 0.093353271484375 15 Unmodified _GQISDRPSLSV_ ENSG00000239961|ENST00000291759|LILRA4;nc|ENSG00000239961|P59901-2|LILRA4 90.96430476242004 0.0006249021630052 4 {[QG]|[NA]}{I|L}SRDPS{I|L}SV 11 2 + 79.493 0.0 0.0 6.867 6.867 80.568 0.0 0.0 0.0 2.998037644757062 5.057135633741268 2.998037644757062 2.998037644757062 0 2.0 0.7958800173440752 0.9802046884880938 1.024227503252014 {[QG]|[NA]}{I|L}SRDPS{I|L}SV;[AG]G{I|L}SRDPS{I|L}SV;{[QG]|[NA]}{I|L}S[VG]DPS{I|L}SV;{[QG]|[NA]}{I|L}VC(Carbamidomethyl (C))VPS{I|L}SV;{[QG]|[NA]}{I|L}SRD[R{I|L}]DV;[AG]G{I|L}S[VG]DPS{I|L}SV;[AG]G{I|L}SRD[R{I|L}]DV;{[QG]|[NA]}{I|L}SRN{[QG]|[NA]}{I|L}SV;{[QG]|[NA]}{I|L}SRDP{[WT]|[RM]}V;[AG]VASRDPS{I|L}SV 6.867;6.608;6.0785;5.7051;5.3821;5.3042;5.12;5.0754;5.0483;5.0339 -;-;-;-;-;-;-;-;-;- 9952 1 1.619 137257.7 0.959999978542328 5489 4641 10117 HBL1_DMSO_200M_050219_2,10132 HBL1_DMSO_200M_050219_2,10132,GQISDRPSLSV True True GQISDRPSLSV 54.992138 579.808337390423 7667222.0 10117.0 nc|ENSG00000239961|P59901-2|LILRA4;;ENSG00000239961|ENST00000291759|LILRA4 6.770558516184489 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10133 55.006 800.0 186790.0 25 0 8300.8 5318 DLEAQIVKDI 10 171 572.31766251163 0 572.3173705935478 PEAK CID FTMS 0 0 0 10117 180955.84375 1.0 0 0.0 16 Unmodified _DLEAQIVKDI_ ENSG00000182533|ENST00000343849|CAV3 17.11289562659939 0.3208555510962471 4 V 1 9 8.0989 0.0 0.0 0.7088 0.0 0.0 203.07839331191525 837.4454439752561 1040.523837287171 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + V 0.7088 + + 430 + 1 1.619 116140.9 0.949999988079071 5490 4641 10117 HBL1_DMSO_200M_050219_2,10133 HBL1_DMSO_200M_050219_2,10133,DLEAQIVKDI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10134 55.02 800.0 131560.0 25 0 6095.7 + 13691 HQIEAVDGEEL 11 140 620.2961617544174 1238.5777705756348 2 620.2955810427666 MULTI CID FTMS 0 0 0 10117 136645.140625 0.011126623575829 7 -0.6603202819824219 17 Unmodified _HQIEAVDGEEL_ ENSG00000105404|ENST00000222008|RABAC1;ENST00000595226.1_1_19:42461000-42461518:-|nuORF 36.39500950444726 0.267929034476522 4 [HQ]{I|L}EAVDGEE{I|L} 11 0 + 67.872 0.0 0.0 5.4799 5.4799 70.724 0.0 0.0 0.0 0.5074069358274045 16.575773191777927 0.5074069358274045 0.5074069358274045 0 0.6307196863200843 0.0 0.25 0.2134679910804404 + + [HQ]{I|L}EAVDGEE{I|L};{NN|[MP]|[D{I|L}]|[EV]}GRHVDGEE{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]AVDGEE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HA]AAVDGEE{I|L};{[DA]|[EG]}[H{I|L}]AAVDGEE{I|L};{NN|[MP]|[D{I|L}]|[EV]}GRHVDWE{I|L};{[QN]|[E{I|L}]|[KN]}[QA]HVDGEE{I|L};{NN|[MP]|[D{I|L}]|[EV]}G[VG]HVDGEE{I|L};{[DA]|[EG]}V[VG]HVDGEE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HA]AAVDWE{I|L} 5.4799;5.4389;5.3978;5.0232;4.9646;4.908;4.8335;4.7019;4.6433;4.4893 +;-;-;-;-;-;-;-;-;- + 3227 1 1.619 83593.3 0.9200000166893004 5491 4641 10117 HBL1_DMSO_200M_050219_2,10134 HBL1_DMSO_200M_050219_2,10134,HQIEAVDGEEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10135 55.035 800.0 153340.0 25 0 10104.0 + 45063 YPYGGPYDRV 10 156 593.7802958226931 1185.546038712186 2 593.7801391482353 MULTI CID FTMS 0 0 0 10117 131674.359375 0.8460736277992842 1 -0.1582107543945312 18 Unmodified _YPYGGPYDRV_ ARID1A|p.P1568Lfs*44|1|0.31|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A 22.65808497894818 0.4596126414678359 4 YPYGG[EP][Q{I|L}]Y 10 4 + 70.947 0.0 0.0 5.9843 5.9843 77.188 0.0 0.0 0.0 28.987251815894943 2.990954958867817 2.990954958867817 2.990954958867817 0 0.7302046884880937 2.0 0.0 0.0 YPYGG[EP][Q{I|L}]Y;YPYGG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}C(Carbamidomethyl (C)){I|L};YPYG[WP][Q{I|L}]Y;YPYN[EP][Q{I|L}]Y;YPYGG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}GC{I|L};YPYN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}C(Carbamidomethyl (C)){I|L};YPYGG[EP][YQ]{I|L};YPYGG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{I|L}C{I|L};YPYN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}GC{I|L};YPYG[KS][QA]C(Carbamidomethyl (C)){I|L} 5.9843;5.7321;5.4334;5.4334;5.3764;5.1811;5.1661;4.9175;4.8218;4.6583 -;-;-;-;-;-;-;-;-;- 716 + 1 1.619 94241.9 0.8999999761581421 5492 4641 10117 HBL1_DMSO_200M_050219_2,10135 HBL1_DMSO_200M_050219_2,10135,YPYGGPYDRV False True YPYGGPYDRV 55.034815 593.780139148235 2106216.0 10117.0 ARID1A|p.P1568Lfs*44|1|0.31|ENSG00000117713|chr1:26774926-26774926|C/-|frameshift_variant;;nc|ENSG00000117713|O14497-3|ARID1A;;ENSG00000117713|ENST00000324856|ARID1A;;nc|ENSG00000117713|O14497-2|ARID1A 4.937389691670735 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10136 55.04 281.0 292840.0 25 0 23425.0 + 27912 PLSWTEPV 8 129 464.74269551758135 927.4708381019628 2 466.7482177615166 MULTI CID FTMS 0 0 0 10117 123099.21875 0.319274815563968 6 -0.5430564880371094 19 Unmodified _PLSWTEPV_ REV__ENSG00000152942|ENST00000354868|RAD17;REV__ENST00000504177.5_1_5:68666979-68710116:+|nuORF;REV__nc|ENSG00000152942|O75943-3|RAD17;REV__nc|ENSG00000152942|O75943-4|RAD17;REV__nc|ENSG00000152942|O75943|RAD17 15.768221252438446 0.6779680726941459 4 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 1.5746 0.0 0.0 762.4244799250081 0.0 762.4244799250081 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.5746 - 355 + 1 1.619 67270.2 1.0 5493 4641 10117 HBL1_DMSO_200M_050219_2,10136 HBL1_DMSO_200M_050219_2,10136,PLSWTEPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10137 55.054 800.0 181100.0 25 0 11445.0 29205 QGIQKLGV 8 190 421.7593871951103 0 421.7593871951103 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _QGIQKLGV_ ENST00000379705.7_1_13:38444423-38444483:-|nuORF 13.50788311687929 0.5021269579892848 4 {I|L} 1 7 9.6041 0.0 0.0 1.1413 0.0 0.0 185.07744150215007 540.3166597955686 725.3941012977186 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L} 1.1413 + + 79 + 1 1.619 114504.6 0.7599999904632568 5494 4641 10117 HBL1_DMSO_200M_050219_2,10137 HBL1_DMSO_200M_050219_2,10137,QGIQKLGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10139 55.058 11.0 4827800.0 25 0 910070.0 + 22648 LPYQIKKI 8 73 334.8831769753103 1001.6277015261307 3 334.8828918337822 MULTI CID FTMS 0 0 0 10138 4034306.75 0.3969740508525043 1 -0.0810775756835937 1 Unmodified _LPYQIKKI_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 34.10243960390752 0.3329570729325616 4 {I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}KK{I|L} 8 2 + 53.581 0.0 0.0 5.3494 5.3494 53.969 0.0 0.0 0.0 16.40978057358332 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 {I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}KK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}K{I|L}K;{I|L}PYQ{I|L}K{I|L}K;{I|L}PYQ{I|L}KK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[AG]{I|L}K{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}[AG]{I|L}KK{I|L};{I|L}PY[AG]{I|L}K{I|L}K;{I|L}PY[AG]{I|L}KK{I|L};{I|L}{I|L}P[YQ]K{I|L}K;{I|L}{I|L}P[YQ]KK{I|L} 5.3494;5.3494;4.8731;4.8731;4.4247;4.4247;3.9484;3.9484;2.8547;2.8547 -;-;-;+;-;-;-;-;-;- + 221 + 1 1.602 49555.9 1.0 5495 4642 10138 HBL1_DMSO_200M_050219_2,10139 HBL1_DMSO_200M_050219_2,10139,LPYQIKKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10140 55.059 35.0 1916700.0 25 0 189030.0 + 22052 LPPPPPPHL 9 88 482.78449894353474 963.5544449538696 2 482.7846557497978 MULTI CID FTMS 0 0 0 10138 1703657.5 0.8825687291576522 2 -0.1721267700195312 2 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 56.04830969593885 0.0282699710924866 4 {I|L}PPPPPP[H{I|L}] 9 0 + 80.908 0.0 0.0 8.3968 8.3968 96.399 0.0 0.0 0.0 67.72038431917139 4.762036441594191 4.762036441594191 22.21848749616356 0 0.805462187404089 2.0 0.0 0.0 + + {I|L}PPPPPP[H{I|L}];{I|L}PPP[YK][H{I|L}];{I|L}PP[YK]P[H{I|L}];{I|L}P[YK]PP[H{I|L}];{I|L}[YK]PPP[H{I|L}];{I|L}[YK][YK][H{I|L}] 8.3968;6.0909;6.0909;5.6958;3.1794;0.88057 +;-;-;-;-;- + 148 + 1 1.602 58702.2 1.0 5496 4642 10138 HBL1_DMSO_200M_050219_2,10140 HBL1_DMSO_200M_050219_2,10140,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10141 55.06 13.0 3668400.0 25 0 393070.0 + + -1 SFQPISFMHS 10 84 591.2243724537752 1180.4341919743504 2 591.2252685427666 MULTI CID FTMS 0 0 0 10138 4673936.0 0.9805605509676087 -1 0.1582107543945312 3 Carbamidomethyl (C) _MNQSYC(Carbamidomethyl (C))TFM_ ENSG00000232263|ENST00000416044|KRTAP25-1 7.910154910731844 0.6385446671287552 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GANM 6 -1 34.614 0.0 0.0 2.9323 0.0 0.0 0.0 570.1673212070253 570.1673212070253 18.41637507904749 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GANM 2.9323 - 108 1 1.602 39172.1 1.0 5497 4642 10138 HBL1_DMSO_200M_050219_2,10141 HBL1_DMSO_200M_050219_2,10141,MNQSYCTFM False False SFQPISFMHS 55.060381 591.225268542767 1168766.25 10138.0 ENSG00000232263|ENST00000416044|KRTAP25-1 2.8007686932881675 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10142 55.062 19.0 2787100.0 25 0 169350.0 + 38373 TQTAVITRI 9 88 501.8009992483567 1001.5874455635134 2 501.8006774783134 MULTI CID FTMS 0 0 0 10138 1662942.75 0.3232747145272275 -2 0.2515640258789062 4 Unmodified _TQTAVITRI_ ENSG00000101447|ENST00000619850|FAM83D;nc|ENSG00000101447|Q9H4H8-2|FAM83D 30.43146612281011 0.143988730116972 4 [QT]TAV{I|L}TR{I|L} 9 0 + 59.46 0.0 0.0 5.9366 5.9366 89.505 0.0 0.0 0.0 48.045710514737735 10.08843973558038 10.08843973558038 23.750612633917 0 1.0 0.8860566476931632 0.0 0.2887254899964357 + + [QT]TAV{I|L}TR{I|L};[QT]{I|L}{[SA]|[TG]}{I|L}TR{I|L};[QT]T[NG][K{I|L}]K{I|L} 5.9366;3.5653;2.3506 +;-;- + 115 + 1 1.602 49128.1 1.0 5498 4642 10138 HBL1_DMSO_200M_050219_2,10142 HBL1_DMSO_200M_050219_2,10142,TQTAVITRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10143 55.063 56.0 1364800.0 25 0 152970.0 + 3043 AVLDRMHSL 9 87 521.278701940247 1040.5428509472938 2 521.2794677615166 MULTI CID FTMS 0 0 0 10138 1103302.75 0.5760058002433518 -1 0.1582107543945312 5 Unmodified _AVLDRMHSL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 80.6760300276096 0.0173529540220427 4 {I|L}G{I|L}DRMHS{I|L} 9 2 + 95.702 0.0 0.0 9.1974 9.1974 87.545 0.0 0.0 0.0 73.18327615212979 12.252684618815096 12.252684618815096 4.247425010840047 0 2.048455006504028 2.0 2.2856668758921828 0.0 {I|L}G{I|L}DRMHS{I|L};AV{I|L}DRMHS{I|L};{I|L}G{[QG]|[NA]}M[KA]HS{I|L};AV{[QG]|[NA]}M[KA]HS{I|L};{[VA]|[{I|L}G]}{[QG]|[NA]}[KA]MHS{I|L};{I|L}G[{M(Oxidation (M))|F}V]{[WT]|[RM]}[YR];AV[{M(Oxidation (M))|F}V]{[WT]|[RM]}[YR];{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M[R{M(Oxidation (M))|F}]S{I|L};A{M(Oxidation (M))|F}H[RP][DV]S{I|L};{[TV]|[{I|L}S]}H{[WT]|[RM]}D{I|L}G{I|L} 9.1974;8.7892;7.1382;6.73;4.6128;4.0333;3.6251;2.786;2.6773;2.5617 -;+;-;-;-;-;-;-;-;- + 334 + 1 1.602 67739.6 1.0 5499 4642 10138 HBL1_DMSO_200M_050219_2,10143 HBL1_DMSO_200M_050219_2,10143,AVLDRMHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10144 55.064 34.0 1615600.0 25 0 159480.0 + 41188 VPDTSRIYV 9 75 525.2850203801842 1048.5554878271682 2 525.2854492068291 MULTI CID FTMS 0 0 0 10138 968533.9375 0.0851250813647731 -5 0.5368461608886719 6 Unmodified _VPDTSRIYV_ ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT 26.268140514670165 0.1969607489560049 4 VPDT 4 5 52.083 0.0 0.0 4.9671 0.0 0.0 0.0 633.3381441705686 633.3381441705686 26.49309176565892 0.0 0.0 0.0 0 0.2887254899964357 1.3010299956639813 0.4247425010840047 0.0 + VPDT 4.9671 + + 95 + 1 1.602 54334.9 1.0 5500 4642 10138 HBL1_DMSO_200M_050219_2,10144 HBL1_DMSO_200M_050219_2,10144,VPDTSRIYV False True VPDTSRIYV 55.064169 525.285449206829 632947840.0 10138.0 ENSG00000126756|ENST00000333119|UXT;;nc|ENSG00000126756|Q9UBK9-2|UXT 5.725674470265706 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10145 55.066 69.0 1037700.0 25 0 195370.0 22394 LPSTARLL 8 89 435.7733488325226 869.5321447318453 2 435.7739135622978 MULTI CID FTMS 0 0 0 10138 824687.75 1.0 0 0.0 7 Unmodified _LPSTARLL_ ENST00000403766.7_1_13:100037683-100037752:+|nuORF 28.486842064014134 0.4448922141344407 4 {I|L}P 2 6 41.836 0.0 0.0 4.8113 0.0 0.0 0.0 656.3727280092182 656.3727280092182 21.65878117603789 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {I|L}P 4.8113 + + 149 + 1 1.602 62669.5 1.0 5501 4642 10138 HBL1_DMSO_200M_050219_2,10145 HBL1_DMSO_200M_050219_2,10145,LPSTARLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10146 55.068 81.0 1008800.0 25 0 92511.0 + 4261 DAPVALVVH 9 94 460.7636312230757 919.5127095129516 2 460.7635681033134 MULTI CID FTMS 0 0 0 10138 797223.8125 0.6427536418107946 -1 0.1582107543945312 8 Unmodified _DAPVALVVH_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 59.79521254764295 0.0261954583213598 4 {[DA]|[EG]}PVA{I|L}VVH 9 0 + 71.819 0.0 0.0 7.8106 7.8106 93.337 0.0 0.0 0.0 22.37643016799588 11.760912590556812 11.760912590556812 11.760912590556812 0 0.6747425010840047 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}PVA{I|L}VVH;{[DA]|[EG]}PVA{I|L}VHV 7.8106;6.5315 +;- + 207 + 1 1.602 66878.1 1.0 5502 4642 10138 HBL1_DMSO_200M_050219_2,10146 HBL1_DMSO_200M_050219_2,10146,DAPVALVVH True True DAPVALVVH 55.06765 460.763568103313 9494731.0 10138.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 7.731304327646892 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10147 55.069 70.0 819600.0 25 0 93047.0 + 39860 VFIDKQTNL 9 84 539.3005271569796 1076.586501380759 2 539.3032104372978 MULTI CID FTMS 0 0 0 10138 653566.75 0.1379245124544616 -2 0.2515640258789062 9 Unmodified _VFIDKQTNL_ ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1 63.960520009940105 0.0238892913700936 4 V{M(Oxidation (M))|F}{I|L}DK[QT]N{I|L} 9 0 + 61.13 0.0 0.0 5.6781 5.6781 80.814 0.0 0.0 0.0 16.478174818886373 6.98970004336018 6.98970004336018 6.242209500285014 0 0.4247425010840047 0.0 0.7614393726401688 1.6237125054200234 + + V{M(Oxidation (M))|F}{I|L}DK[QT]N{I|L};V{M(Oxidation (M))|F}{I|L}D[{M(Oxidation (M))|F}V][QP]{I|L};V{M(Oxidation (M))|F}{I|L}DK[QT]QV;V{M(Oxidation (M))|F}{I|L}D[{M(Oxidation (M))|F}V]{I|L}[QP];V{M(Oxidation (M))|F}{I|L}DK[QT]GG{I|L};V{M(Oxidation (M))|F}{I|L}DK[QT][AG]V;V{M(Oxidation (M))|F}{I|L}[{I|L}P][YT][QP] 5.6781;5.0983;5.0288;4.7286;4.5681;3.9188;2.314 +;-;-;-;-;-;- + 545 + 1 1.602 51491.1 1.0 5503 4642 10138 HBL1_DMSO_200M_050219_2,10147 HBL1_DMSO_200M_050219_2,10147,VFIDKQTNL True True VFIDKQTNL 55.069311 539.303210437298 71952480.0 10138.0 nc|ENSG00000048740|O95319-5|CELF2;;nc|ENSG00000149187|Q92879-6|CELF1;;ENSG00000048740|ENST00000633077|CELF2;;nc|ENSG00000149187|Q92879-4|CELF1;;nc|ENSG00000048740|O95319-3|CELF2;;nc|ENSG00000048740|O95319-4|CELF2;;nc|ENSG00000149187|Q92879|CELF1;;nc|ENSG00000048740|O95319|CELF2;;ENSG00000149187|ENST00000687097|CELF1;;nc|ENSG00000149187|Q92879-3|CELF1;;nc|ENSG00000149187|Q92879-5|CELF1;;nc|ENSG00000149187|Q92879-2|CELF1;;nc|ENSG00000048740|O95319-2|CELF2 4.612682024637858 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10148 55.073 221.0 632320.0 25 0 50117.0 + 17332 KLVKEVIAV 9 156 499.83392545340337 997.6532979736068 2 499.8339416384697 MULTI CID FTMS 0 0 0 10138 524962.875 1.0 0 0.0 10 Unmodified _KLVKEVIAV_ ENSG00000105379|ENST00000309244|ETFB;nc|ENSG00000105379|P38117-2|ETFB 70.33199760932243 0.0209706178985989 4 [{I|L}V]KEKV{I|L}AV 9 2 + 70.63 0.0 0.0 7.0796 7.0796 76.29 0.0 0.0 0.0 8.063273204314669 14.973024840566474 8.063273204314669 0.2422750325201548 0 1.1307196863200843 1.0969100130080565 0.8901668265424344 0.5629529932484498 [{I|L}V]KEKV{I|L}AV;[{I|L}V]KEVK{I|L}AV;[{I|L}V]KKEV{I|L}AV;[{I|L}V]KEKVA{I|L}V;[{I|L}V]KEVKA{I|L}V;[K{I|L}]VEKV{I|L}AV;[K{I|L}]VEVK{I|L}AV;{[VA]|[{I|L}G]}VS{I|L}KV{I|L}AV;{[VA]|[{I|L}G]}VS{I|L}VK{I|L}AV;{[VA]|[{I|L}G]}{I|L}[VS]KV{I|L}AV 7.0796;7.0553;6.4405;6.3336;6.3094;6.2714;6.2471;6.1624;6.1381;6.1323 -;-;-;-;-;-;-;-;-;- 7186 1 1.602 108147.5 1.0 5504 4642 10138 HBL1_DMSO_200M_050219_2,10148 HBL1_DMSO_200M_050219_2,10148,KLVKEVIAV True True KLVKEVIAV 55.073469 499.83394163847 4439702.5 10138.0 nc|ENSG00000105379|P38117-2|ETFB;;ENSG00000105379|ENST00000309244|ETFB 3.593690554300944 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10149 55.075 83.0 473900.0 25 0 35094.0 + 45844 YYPTSSSTSF 10 75 570.2485734316576 1138.4825939301152 2 570.2484008669853 MULTI CID FTMS 0 0 0 10138 505908.0 0.7159956112526576 2 -0.1721267700195312 11 Unmodified _YYPTSSSTSF_ ENSG00000102119|ENST00000369842|EMD;ENST00000471965.1_1_X:153609106-153609554:+|nuORF 32.30548876998284 0.2428506522065767 4 YYC(Carbamidomethyl (C))KT[NG]S{M(Oxidation (M))|F} 9 6 + 45.824 0.0 0.0 4.025 4.025 77.708 0.0 0.0 0.0 29.37076236157729 9.62144052772942 9.62144052772942 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.3494850021680094 YYC(Carbamidomethyl (C))KT[NG]S{M(Oxidation (M))|F};YY[CG]KT[NG]S{M(Oxidation (M))|F};YYC(Carbamidomethyl (C))KG{[QS]|[NT]}S{M(Oxidation (M))|F};YY[CG]KG{[QS]|[NT]}S{M(Oxidation (M))|F} 4.025;3.2162;3.1892;2.3804 -;-;-;- 107 + 1 1.602 36390.3 1.0 5505 4642 10138 HBL1_DMSO_200M_050219_2,10149 HBL1_DMSO_200M_050219_2,10149,YYPTSSSTSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10150 55.084 479.0 297490.0 25 0 32334.0 -1 YAMYLCEWC 9 149 599.2219557020751 1196.42935847095 2 599.2227050662041 MULTI CID FTMS 0 0 0 10138 410027.03125 0.9967162945989744 -1 0.1582107543945312 12 Oxidation (M) _YAM(Oxidation (M))YLCEWC_ ENSG00000167695|ENST00000308278|TLCD3A;ENST00000570699.1_1_17:636236-644807:+|nuORF;nc|ENSG00000167695|Q8TBR7-1|TLCD3A 8.593279151180031 0.6146971463335029 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GAN{M(Oxidation (M))|F}GCP 9 -1 34.013 0.0 0.0 2.8429 0.0 0.0 0.0 313.0846678794064 313.0846678794064 12.559575255655425 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.25 0.2742275032520141 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GAN{M(Oxidation (M))|F}GCP 2.8429 - 1213 1 1.602 106945.9 1.0 5506 4642 10138 HBL1_DMSO_200M_050219_2,10150 HBL1_DMSO_200M_050219_2,10150,YAMYLCEWC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10151 55.086 77.0 782230.0 25 0 87923.0 + 2372 AQLTSTPAI 9 101 451.2534448036031 900.4923366740062 2 451.2541076540947 MULTI CID FTMS 0 0 0 10138 389909.3125 0.4632825903579609 -2 0.2515640258789062 13 Unmodified _AQLTSTPAI_ ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A 54.773552608820026 0.0299037012502309 4 {[TV]|[{I|L}S]}VN{I|L}G 6 7 42.88 0.0 0.0 4.7619 0.0 0.0 0.0 314.1320821176187 314.1320821176187 28.27623146104628 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.3252574989159953 0.0 {[TV]|[{I|L}S]}VN{I|L}G 4.7619 - 611 1 1.602 50643.3 1.0 5507 4642 10138 HBL1_DMSO_200M_050219_2,10151 HBL1_DMSO_200M_050219_2,10151,AQLTSTPAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10152 55.088 93.0 645220.0 25 0 160290.0 + 31885 RTLPETLDPA 10 73 556.8011397577762 1111.5877265823524 2 556.8018066287041 MULTI CID FTMS 0 0 0 10138 340159.625 0.1724344589223531 -3 0.3645401000976562 14 Unmodified _RTLPETLDPA_ ENSG00000065518|ENST00000184266|NDUFB4;nc|ENSG00000065518|O95168-2|NDUFB4 34.93206674587334 0.2110832994570416 4 WD{I|L}T 4 8 46.983 0.0 0.0 4.2266 0.0 0.0 0.0 593.3062161351901 593.3062161351901 26.69206604939021 0.0 0.0 0.0 0 1.0 0.0 0.805462187404089 0.0 WD{I|L}T 4.2266 - 51 + 1 1.602 55123.4 1.0 5508 4642 10138 HBL1_DMSO_200M_050219_2,10152 HBL1_DMSO_200M_050219_2,10152,RTLPETLDPA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10153 55.101 775.0 123520.0 25 0 23828.0 -1 0 54 1129.464233432651 3385.370870898153 3 1130.465380847454 MULTI CID FTMS 0 0 0 10138 269336.0625 0.2526162753889681 5 -0.3848457336425781 15 4 E 1 -1 6.9897 0.0 0.0 0.20647 0.0 0.0 2729.141699725521 524.1654146783811 3253.3071144039027 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20647 - 35 + 1 1.602 84616.0 1.0 5509 4642 10138 HBL1_DMSO_200M_050219_2,10153 HBL1_DMSO_200M_050219_2,10153, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10154 55.105 215.0 659970.0 25 0 44849.0 -1 0 130 358.21132303011143 714.4080931270229 2 358.2104369997978 MULTI CID FTMS 0 0 0 10138 258918.5 0.5284758463521361 -2 0.2515640258789062 16 4 V{M(Oxidation (M))|F}{I|L}HTV 6 -1 + 55.551 0.0 0.0 7.7758 7.7758 88.877 0.0 0.0 0.0 16.197887582883936 7.257724967479859 7.257724967479859 7.257724967479859 0 0.8296896906561031 0.0 1.5138793319624575 0.0 V{M(Oxidation (M))|F}{I|L}HTV;V{M(Oxidation (M))|F}{I|L}HS{I|L};[H{I|L}]{M(Oxidation (M))|F}TVV;[H{I|L}]S{I|L}{M(Oxidation (M))|F}V;[H{I|L}]TV{M(Oxidation (M))|F}V;[H{I|L}]T{M(Oxidation (M))|F}VV;[HT]V{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}H{I|L}{M(Oxidation (M))|F}V;[HT]{I|L}V{M(Oxidation (M))|F}V;[HT]{I|L}{M(Oxidation (M))|F}VV 7.7758;6.7599;6.7403;6.6029;5.9879;5.7039;4.0079;3.8946;3.393;3.109 -;-;-;-;-;-;-;-;-;- 304 + 1 1.602 130299.0 1.0 5510 4642 10138 HBL1_DMSO_200M_050219_2,10154 HBL1_DMSO_200M_050219_2,10154, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10155 55.108 161.0 365190.0 25 0 45730.0 + 36147 SVVDHFNRI 9 84 362.8614122019854 1085.5624072061562 3 362.8615600466728 MULTI CID FTMS 0 0 0 10138 260039.078125 0.0259608050878127 4 -0.3557395935058594 17 Unmodified _SVVDHFNRI_ ENSG00000103035|ENST00000219313|PSMD7;ENST00000422197.2_1_1:51837944-51838202:+|nuORF;ENST00000566015.1_1_16:74330767-74334139:+|nuORF 27.628801355627647 0.1796483985696185 4 [VS]VDH{M(Oxidation (M))|F}N[R{I|L}] 9 0 + 59.873 0.0 0.0 5.5154 5.5154 83.674 0.0 0.0 0.0 38.90355905450456 0.6593871989765887 0.6593871989765887 9.208187539523747 0 0.4247425010840047 2.0 0.805462187404089 0.0 + + [VS]VDH{M(Oxidation (M))|F}N[R{I|L}];[VS]VDH{M(Oxidation (M))|F}GG[R{I|L}];[VS]{[SA]|[TG]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}DV[PA] 5.5154;4.6671;3.4024 +;-;- + 74 + 1 1.602 58981.5 1.0 5511 4642 10138 HBL1_DMSO_200M_050219_2,10155 HBL1_DMSO_200M_050219_2,10155,SVVDHFNRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10156 55.111 106.0 574430.0 25 0 48206.0 43900 YFVLSSQAR 9 89 535.7844095268147 1069.5542661204292 2 535.7825195193291 MULTI CID FTMS 0 0 0 10138 229683.078125 0.8992059980519275 -2 0.2515640258789062 18 Unmodified _YFVLSSQAR_ ENSG00000132357|ENST00000254691|CARD6 22.736283301280096 0.2418982879461534 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AV[KG]AVYE 10 8 + 47.844 0.0 0.0 4.4732 4.4732 69.597 0.0 0.0 0.0 4.840599579066819 18.11674284527308 4.840599579066819 2.0289375146765 0 0.805462187404089 1.0457574905606752 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AV[KG]AVYE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{[QN]|[E{I|L}]|[KN]}{I|L}VYE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AV[KQ]VYE;{[VA]|[{I|L}G]}AY[KG]AVYE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{NN|[MP]|[D{I|L}]|[EV]}VVVYE;{M(Oxidation (M))|F}YVA{[NV]|[RG]}KMV;{M(Oxidation (M))|F}YVA[KG]VGMV;{M(Oxidation (M))|F}YVA[KG]VAC{I|L};{NN|[MP]|[D{I|L}]|[EV]}[YR]{I|L}VYE;{M(Oxidation (M))|F}YV{I|L}{[QN]|[E{I|L}]|[KN]}GMV 4.4732;4.2835;3.8625;3.7382;3.7291;3.7235;3.6494;3.5999;3.5923;3.4597 -;-;-;-;-;-;-;-;-;- 620 1 1.602 54673.6 1.0 5512 4642 10138 HBL1_DMSO_200M_050219_2,10156 HBL1_DMSO_200M_050219_2,10156,YFVLSSQAR False True FYVASSRQL 55.110608 535.782519519329 2416516.25 10138.0 nc|ENSG00000103222|P33527-2|ABCC1;;nc|ENSG00000103222|P33527-5|ABCC1;;nc|ENSG00000103222|P33527-3|ABCC1;;nc|ENSG00000103222|P33527-8|ABCC1;;nc|ENSG00000103222|P33527-4|ABCC1;;ENSG00000103222|ENST00000399410|ABCC1;;nc|ENSG00000103222|P33527-9|ABCC1;;nc|ENSG00000103222|P33527-6|ABCC1;;nc|ENSG00000103222|P33527-7|ABCC1 3.59450912475586 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10157 55.123 651.0 184680.0 25 0 22237.0 -1 MEETCHYANNT 11 122 714.2614747619734 1426.5083965907468 2 714.7638427615166 MULTI CID FTMS 0 0 0 10138 226152.703125 1.0 0 0.0 19 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))EETC(Carbamidomethyl (C))HYANNT_ ENST00000580548.5_1_17:66245218-66246405:+|nuORF 2.735195868890462 0.8622431031272658 4 [YR]YMD 5 -1 22.218 0.0 0.0 1.5575 0.0 0.0 0.0 695.1962374322874 695.1962374322874 4.057775920759102 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 [YR]YMD 1.5575 - 335 + 1 1.602 89383.9 1.0 5513 4642 10138 HBL1_DMSO_200M_050219_2,10157 HBL1_DMSO_200M_050219_2,10157,MEETCHYANNT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10158 55.135 673.0 86206.0 25 0 4231.1 7626 EITVLDETWTV 11 115 653.3302758049635 1304.645998676727 2 653.3303100466728 MULTI CID FTMS 0 0 0 10138 207981.03125 0.2199229723555799 2 -0.1721267700195312 20 Unmodified _EITVLDETWTV_ nc|ENSG00000089177|Q96L93-6|KIF16B 12.240655878213236 0.7805268987462184 4 SN{I|L}W 4 9 42.607 0.0 0.0 3.2658 0.0 0.0 786.3761463849625 0.0 786.3761463849625 0.0 23.426003480513486 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.3807196863200844 SN{I|L}W 3.2658 - 231 1 1.602 50295.0 1.0 5514 4642 10138 HBL1_DMSO_200M_050219_2,10158 HBL1_DMSO_200M_050219_2,10158,EITVLDETWTV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10160 55.139 1.8 35838000.0 25 0 3947600.0 + 4165 DAPHPPLKI 9 68 329.85914441787924 986.5556038538376 3 329.8591186404228 MULTI CID FTMS 0 0 0 10159 26317204.0 0.6877608319988694 1 -0.0910491943359375 1 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 19.256988751693697 0.3154191944385105 4 {[DA]|[EG]}PHP 5 4 43.966 0.0 0.0 4.4565 0.0 0.0 0.0 466.30491553514696 466.30491553514696 33.25257498915995 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {[DA]|[EG]}PHP 4.4565 + + 45 + 1 1.602 61968.0 1.0 5515 4643 10159 HBL1_DMSO_200M_050219_2,10160 HBL1_DMSO_200M_050219_2,10160,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10161 55.14 1.9 25516000.0 25 0 3206500.0 + 4171 DAPHPPLKI 9 67 494.2848575762056 986.5551622192112 2 494.2852050662041 MULTI CID FTMS 0 0 0 10159 27833288.0 0.7539595400994621 1 -0.0910491943359375 2 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 36.12702656103203 0.0967173616627612 4 K{I|L} 2 7 15.433 0.0 0.0 1.5643 0.0 0.0 727.3649594377644 0.0 727.3649594377644 0.0 3.8392564687191566 0.0 0.0 0 0.5 0.0 0.0 0.0 + K{I|L} 1.5643 + + 43 + 1 1.602 42346.2 1.0 5516 4643 10159 HBL1_DMSO_200M_050219_2,10161 HBL1_DMSO_200M_050219_2,10161,DAPHPPLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10162 55.141 11.0 4806600.0 25 0 1240400.0 + 15069 IMHIQSNFL 9 75 368.19447723393614 1101.5616023020084 3 368.1942016482353 MULTI CID FTMS 0 0 0 10159 4641478.5 0.4812836162583471 22 -1.944122314453125 3 Unmodified _IMHIQSNFL_ REV__ENSG00000157578|ENST00000288350|LCA5L 15.847184025352805 0.4077185912009129 4 PE 2 -1 20.701 0.0 0.0 1.8792 0.0 0.0 857.4431019513687 0.0 857.4431019513687 0.0 6.721675119240516 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 PE 1.8792 - 68 1 1.602 47977.8 1.0 5517 4643 10159 HBL1_DMSO_200M_050219_2,10162 HBL1_DMSO_200M_050219_2,10162,IMHIQSNFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10163 55.143 23.0 2121200.0 25 0 223430.0 + 9956 FPGKHFQEI 9 76 551.7875691100098 1101.5605852868196 2 551.7878295779228 MULTI CID FTMS 0 0 0 10159 2545913.75 0.5436187122205826 22 -1.944122314453125 4 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 45.739877483867886 0.0497104363764649 4 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 6 + 31.604 0.0 0.0 2.869 2.869 70.787 0.0 0.0 0.0 18.505018913849653 1.5889575636790632 1.5889575636790632 6.020599913279625 0 0.0 0.0 0.8494850021680094 0.8494850021680094 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}{I|L}Q{M(Oxidation (M))|F}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}P[SG]{M(Oxidation (M))|F}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[AG][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}P[YK][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}{I|L}[AG]{M(Oxidation (M))|F}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.869;2.3225;2.0646;2.0282;2.023;1.4816 -;-;-;-;-;- 255 + 1 1.602 44356.8 1.0 5518 4643 10159 HBL1_DMSO_200M_050219_2,10163 HBL1_DMSO_200M_050219_2,10163,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10164 55.144 22.0 1955400.0 25 0 269140.0 + 29709 QPITPGPSI 9 83 455.2555885603596 908.4966241875192 2 455.2557250857353 MULTI CID FTMS 0 0 0 10159 2315607.5 0.1258165060549948 7 -0.5735626220703125 5 Unmodified _QPITPGPSI_ ENSG00000004487|ENST00000400181|KDM1A;ENST00000602503.1_1_1:23408727-23408946:+|nuORF;nc|ENSG00000004487|O60341|KDM1A 65.23502041540118 0.0231836506122253 4 PS{I|L} 3 6 28.039 0.0 0.0 3.0863 0.0 0.0 593.3171330759942 0.0 593.3171330759942 0.0 16.929548929887357 0.0 0.0 0 0.9247425010840048 0.0 0.6139829889124311 0.0 + PS{I|L} 3.0863 + + 225 + 1 1.602 39535.3 1.0 5519 4643 10159 HBL1_DMSO_200M_050219_2,10164 HBL1_DMSO_200M_050219_2,10164,QPITPGPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10165 55.145 18.0 3218500.0 25 0 335830.0 21892 LPPEVNRI 8 71 469.27679076482383 936.5390285964476 2 469.2768127322197 MULTI CID FTMS 0 0 0 10159 2036447.0 0.228346646519162 19 -1.853065490722656 6 Unmodified _LPPEVNRI_ ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 19.256988751693697 0.6264283240490721 4 {I|L}PPEV 5 3 56.186 0.0 0.0 5.9993 0.0 0.0 0.0 398.2153719537719 398.2153719537719 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPEV 5.9993 + + 30 + 1 1.602 51317.9 1.0 5520 4643 10159 HBL1_DMSO_200M_050219_2,10165 HBL1_DMSO_200M_050219_2,10165,LPPEVNRI False True PLPEVVRQ 55.144995 469.27681273222 122237648.0 10159.0 nc|ENSG00000125618|Q06710-4|PAX8;;nc|ENSG00000125618|Q06710-3|PAX8;;nc|ENSG00000125618|Q06710-2|PAX8;;nc|ENSG00000125618|Q06710-5|PAX8;;ENSG00000125618|ENST00000429538|PAX8 -0.4193481206893921 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10166 55.146 25.0 2112800.0 25 0 292400.0 + 5808 DPPYSRVI 8 72 473.7532292149006 945.4919054966012 2 473.7534667849541 MULTI CID FTMS 0 0 0 10159 1816621.375 0.7127330781096788 -5 0.5760002136230469 7 Unmodified _DPPYSRVI_ ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2 22.736283301280096 0.5659792798204337 4 DPPY[RV]S{I|L} 8 2 + 68.849 0.0 0.0 7.2819 7.2819 87.624 0.0 0.0 0.0 47.95880017344075 8.416375079047498 8.416375079047498 7.257724967479859 0 0.8494850021680094 2.0 0.0 0.0 DPPY[RV]S{I|L};DP{I|L}{M(Oxidation (M))|F}[RV]S{I|L} 7.2819;6.5142 -;- 99 + 1 1.602 44604.5 1.0 5521 4643 10159 HBL1_DMSO_200M_050219_2,10166 HBL1_DMSO_200M_050219_2,10166,DPPYSRVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10167 55.147 42.0 2227200.0 25 0 380030.0 + 44657 YPFKPPKV 8 85 325.86056900573425 974.5598776174028 3 325.8604308962822 MULTI CID FTMS 0 0 0 10159 1319289.375 0.0204454984145273 -32 2.6772499084472656 8 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 36.04419817259434 0.3004715606373109 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 54.664 0.0 0.0 5.6091 5.6091 81.984 0.0 0.0 0.0 26.867355479190067 7.7815125038364386 7.7815125038364386 7.7815125038364386 0 0.3054621874040891 1.0457574905606752 0.0 0.3807196863200844 + + YP{M(Oxidation (M))|F}KPPKV;YP{M(Oxidation (M))|F}KPV[KP];YP{M(Oxidation (M))|F}KVP[KP];[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KP]P[RH]V{[QN]|[E{I|L}]|[KN]};{[HG]|PP}KK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[HG]|PP}K[RH]V{[QN]|[E{I|L}]|[KN]};Y[{I|L}T][KP]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.6091;4.8106;4.5017;1.7429;0.91056;0.86262;0.37403;0.32609;0.22409 +;-;-;-;-;-;-;-;- + 240 + 1 1.602 83164.9 1.0 5522 4643 10159 HBL1_DMSO_200M_050219_2,10167 HBL1_DMSO_200M_050219_2,10167,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10168 55.149 27.0 1574500.0 25 0 90300.0 + 30657 RFPDGTNGL 9 88 488.7464410504657 975.4783291677312 2 488.7462951540947 MULTI CID FTMS 0 0 0 10159 1277428.375 0.8313697967731932 6 -0.5356636047363281 9 Unmodified _RFPDGTNGL_ ENSG00000164442|ENST00000367651|CITED2;nc|ENSG00000164442|Q99967-2|CITED2 31.26834338654808 0.1333407332142048 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTNG{I|L} 9 2 + 51.449 0.0 0.0 5.2742 5.2742 79.75 0.0 0.0 0.0 6.777807052660805 16.478174818886373 6.777807052660805 6.777807052660805 0 0.5 1.2218487496163564 0.3807196863200844 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTNG{I|L};[R{M(Oxidation (M))|F}][DP]GTNG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]GTGGG{I|L};[R{M(Oxidation (M))|F}][DP]GTGGG{I|L};[R{M(Oxidation (M))|F}][SG][EP]NG{I|L};{[RE]|[WV]}[NP][YQ]G{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}[EP]NG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP]K[MD]{I|L};{[RE]|[WV]}[NP][YQ]AV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TP] 5.2742;4.5794;4.3302;3.6354;2.0994;1.7394;1.3829;0.96915;0.36052;0.29952 -;+;-;-;-;-;-;-;-;- + 246 1 1.602 36465.1 1.0 5523 4643 10159 HBL1_DMSO_200M_050219_2,10168 HBL1_DMSO_200M_050219_2,10168,RFPDGTNGL False True RFPDGTNGL 55.148531 488.746295154095 284140612.0 10159.0 ENSG00000164442|ENST00000367651|CITED2;;nc|ENSG00000164442|Q99967-2|CITED2 7.210160891215007 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10169 55.15 62.0 1221500.0 25 0 127120.0 + 41164 VPASVVSRI 9 87 464.2847080550917 926.5548631769832 2 464.2844421267509 MULTI CID FTMS 0 0 0 10159 1126250.875 0.3717486970857813 -2 0.239288330078125 10 Unmodified _VPASVVSRI_ ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1 41.95555342248728 0.0647214845423414 4 VPASVV 6 3 75.054 0.0 0.0 8.1004 0.0 0.0 0.0 371.2045076959594 371.2045076959594 43.80001899740286 0.0 0.0 0.0 0 1.1861818737241734 1.5228787452803376 0.3807196863200844 0.0 + VPASVV 8.1004 + + 148 + 1 1.602 63554.4 1.0 5524 4643 10159 HBL1_DMSO_200M_050219_2,10169 HBL1_DMSO_200M_050219_2,10169,VPASVVSRI True True VPASVVSRI 55.15006 464.284442126751 23552984.0 10159.0 nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;;ENSG00000131503|ENST00000360839|ANKHD1 3.897033373514811 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10170 55.152 64.0 952150.0 25 0 126020.0 + 44730 YPIMITTFV 9 76 542.7934218667502 1083.5722908003004 2 542.7929565310478 MULTI CID FTMS 0 0 0 10159 907035.6875 0.04896659645878 31 -2.584930419921875 11 Unmodified _YPIMITTFV_ REV__ENSG00000170456|ENST00000389082|DENND5B;REV__nc|ENSG00000170456|Q6ZUT9-2|DENND5B 11.494710602746466 0.5255349189887087 4 YPP 3 -1 50.445 0.0 0.0 4.6555 0.0 0.0 0.0 723.3806832814271 723.3806832814271 39.84938055512794 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPP 4.6555 - 39 + 1 1.602 55337.4 1.0 5525 4643 10159 HBL1_DMSO_200M_050219_2,10170 HBL1_DMSO_200M_050219_2,10170,YPIMITTFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10171 55.155 166.0 510120.0 25 0 34424.0 -1 0 74 881.9127461829552 1761.8109394327105 2 881.9132568240166 MULTI CID FTMS 0 0 0 10159 638724.8125 0.6129370932609167 -5 0.5760002136230469 12 4 {I|L}N[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 14 -1 77.533 0.0 0.0 4.4008 0.0 0.0 211.09607131172032 0.0 211.09607131172032 0.0 44.30191582041069 0.0 0.0 0 1.8807196863200843 0.0 0.0 0.8494850021680094 {I|L}N[QP]AQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.4008 - 1038 1 1.602 62506.2 1.0 5526 4643 10159 HBL1_DMSO_200M_050219_2,10171 HBL1_DMSO_200M_050219_2,10171, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10172 55.165 581.0 257440.0 25 0 62484.0 -1 0 50 1136.8088094427137 3407.4045989283404 3 1137.144824206829 MULTI CID FTMS 0 0 0 10159 466074.90625 1.0 0 0.0 13 4 E 1 -1 6.9897 0.0 0.0 0.20513 0.0 0.0 2751.175508531008 524.1628537582599 3275.338362289268 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20513 - 7 + 1 1.602 126403.1 1.0 5527 4643 10159 HBL1_DMSO_200M_050219_2,10172 HBL1_DMSO_200M_050219_2,10172, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10173 55.168 119.0 550830.0 25 0 83826.0 + 16383 IYQIHKEYL 9 101 402.88865111423735 1205.644123942912 3 402.8887817263603 MULTI CID FTMS 0 0 0 10159 435090.6875 1.0 0 0.0 14 Unmodified _IYQIHKEYL_ ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR 30.7034409873982 0.1405282614900322 4 {I|L}YQ{I|L}H 5 4 39.035 0.0 0.0 3.2377 0.0 0.0 0.0 548.2755831354124 548.2755831354124 18.579604827597585 0.0 0.0 0.0 0 0.1331596456423734 1.6989700043360187 0.0 0.0 + {I|L}YQ{I|L}H 3.2377 + + 232 + 1 1.602 55565.7 1.0 5528 4643 10159 HBL1_DMSO_200M_050219_2,10173 HBL1_DMSO_200M_050219_2,10173,IYQIHKEYL False True IYQIHKEYL 55.167562 402.88878172636 5811170.0 10159.0 ENSG00000116984|ENST00000366577|MTR;;nc|ENSG00000116984|Q99707-2|MTR 3.8277058204015098 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10174 55.172 237.0 391580.0 25 0 41431.0 + 1325 AIYDHINEGV 10 101 565.7782151726927 1129.5418774121854 2 565.7783691287041 MULTI CID FTMS 0 0 0 10159 312408.65625 0.5608954261538075 -1 0.0810775756835937 15 Unmodified _AIYDHINEGV_ nc|ENSG00000184076|Q9UDW1-2|UQCR10 51.41523569358685 0.0718446036348414 4 [HD]Y{I|L}A{I|L}NEGV 10 4 + 52.885 0.0 0.0 4.682 4.682 72.194 0.0 0.0 0.0 5.764837301042718 8.098943791441968 5.764837301042718 3.0102999566398125 0 0.7302046884880937 0.0 0.0 0.0 [HD]Y{I|L}A{I|L}NEGV;[HD]{I|L}YA{I|L}NEGV;[HD]Y{I|L}A{I|L}NWV;[H{I|L}]DYA{I|L}NEGV;[HD]Y{I|L}NEG[{I|L}A]V;[HD]{I|L}YA{I|L}NWV;[HD]Y{I|L}A{I|L}GGEGV;[VG]E{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}NEGV;[HD]{I|L}YNEG[{I|L}A]V;[HD]{I|L}YA{I|L}GGEGV 4.682;4.4155;4.1891;3.9338;3.9283;3.9226;3.8707;3.6667;3.6618;3.6042 -;-;-;-;-;-;-;-;-;- 1682 1 1.602 74689.0 1.0 5529 4643 10159 HBL1_DMSO_200M_050219_2,10174 HBL1_DMSO_200M_050219_2,10174,AIYDHINEGV True True AIYDHINEGV 55.17201 565.778369128704 4080113.75 10159.0 nc|ENSG00000184076|Q9UDW1-2|UQCR10 7.721931139628093 2.0 True 10.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10175 55.183 631.0 285570.0 25 0 21185.0 + -1 YFYGGLMTTQF 11 144 672.3042163728708 1342.5938798125414 2 672.3045532107353 MULTI CID FTMS 0 0 0 10159 233665.546875 0.4314424190095302 8 -0.6963653564453125 16 Oxidation (M) _YFYGGLM(Oxidation (M))TTQF_ REV__ENSG00000156006|ENST00000286479|NAT2 36.506200033944 0.2662161991516171 4 Y{M(Oxidation (M))|F}P{[NV]|[RG]}Q[WD]Q{M(Oxidation (M))|F} 10 -1 + 38.253 0.0 0.0 2.8492 2.8492 62.568 0.0 0.0 0.0 8.001576146900938 0.2892308603380016 0.2892308603380016 0.8927186071611715 0 1.1307196863200843 0.0 0.3054621874040891 1.1549471895720984 Y{M(Oxidation (M))|F}P{[NV]|[RG]}Q[WD]Q{M(Oxidation (M))|F};Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[C(Carbamidomethyl (C))K][R{M(Oxidation (M))|F}]{M(Oxidation (M))|F};Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}EC[KG][R{M(Oxidation (M))|F}]{M(Oxidation (M))|F};Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[HN]{[WS]|[C(Carbamidomethyl (C)){I|L}]}T{I|L};[AG][HS]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QQ{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}[YK][WD]Q{M(Oxidation (M))|F};[AG]{I|L}E{I|L}[NG]{[QC]|[C(Carbamidomethyl (C))A]}EY{M(Oxidation (M))|F};{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[HD]Q{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[HN][YQ]VP;{I|L}{I|L}[NP]{[ES]|[DT]|[{I|L}C]}CEEY{M(Oxidation (M))|F} 2.8492;2.7827;2.5966;2.5797;2.5306;2.5237;2.4762;2.4273;2.3076;2.2635 -;-;-;-;-;-;-;-;-;- 1753 + 1 1.602 128970.3 1.0 5530 4643 10159 HBL1_DMSO_200M_050219_2,10175 HBL1_DMSO_200M_050219_2,10175,YFYGGLMTTQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10176 55.194 639.0 320980.0 25 0 18037.0 + 18215 KVFEHDSVEL 10 186 601.8064256766412 1201.5982984200823 2 601.8059570193291 MULTI CID FTMS 0 0 0 10159 232744.96875 0.4260577593041974 -2 0.239288330078125 17 Unmodified _KVFEHDSVEL_ ENSG00000139684|ENST00000378720|ESD;ENST00000495654.1_1_13:47359843-47367566:-|nuORF 71.70789743142352 0.0188816056000227 4 {NN|[MP]|[D{I|L}]|[EV]}PQ{M(Oxidation (M))|F}NKVE{I|L} 10 6 + 65.416 0.0 0.0 5.4441 5.4441 74.444 0.0 0.0 0.0 1.847558185554519 30.913741168630715 1.847558185554519 2.550080226862441 0 1.3424778212679485 1.3010299956639813 1.5669015600442575 0.25 {NN|[MP]|[D{I|L}]|[EV]}PQ{M(Oxidation (M))|F}NKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}PN{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GSVE{I|L};[VP]{[C(Carbamidomethyl (C))G]|[NC]}DSVKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}S[HD]{M(Oxidation (M))|F}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KHDSVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}PSHHRVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}PQ{[CA]|SS}SKVE{I|L};{[QN]|[E{I|L}]|[KN]}G{NN|[MP]|[D{I|L}]|[EV]}{I|L}DSVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}PQ{[CA]|SS}KSVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[HD]SKVE{I|L} 5.4441;5.2319;5.1651;5.1011;5.0939;5.0561;4.9749;4.9085;4.8921;4.8247 -;-;-;-;-;-;-;-;-;- 10948 1 1.602 149976.3 1.0 5531 4643 10159 HBL1_DMSO_200M_050219_2,10176 HBL1_DMSO_200M_050219_2,10176,KVFEHDSVEL True True KVFEHDSVEL 55.194185 601.805957019329 8616018.0 10159.0 ENST00000495654.1_1_13:47359843-47367566:-|nuORF;;ENSG00000139684|ENST00000378720|ESD 6.035560925801595 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10177 55.206 698.0 362740.0 25 0 57429.0 + 2830 AVADIKFSSA 10 194 504.7716112691626 1007.5286696051252 2 504.7719909548759 MULTI CID FTMS 0 0 0 10159 202693.0625 0.4045297860092416 -1 0.0810775756835937 18 Unmodified _AVADIKFSSA_ ENSG00000084092|ENST00000264230|NOA1 67.83816525789305 0.0190062514522628 4 {[VA]|[{I|L}G]}AD{I|L}E 6 5 70.793 0.0 0.0 7.0264 0.0 0.0 0.0 406.2098787897094 406.2098787897094 15.950279907637238 0.0 0.0 0.0 0 1.5629529932484498 2.0 1.024227503252014 0.0 {[VA]|[{I|L}G]}AD{I|L}E 7.0264 - 6539 + 1 1.602 189948.1 1.0 5532 4643 10159 HBL1_DMSO_200M_050219_2,10177 HBL1_DMSO_200M_050219_2,10177,AVADIKFSSA True True AVADIKFSSA 55.206304 504.771990954876 3919029.75 10159.0 ENSG00000084092|ENST00000264230|NOA1 5.573279062906901 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10178 55.211 245.0 331510.0 25 0 18573.0 + 25114 MPYQEIKNV 9 124 561.2864784644923 1120.5584039957846 2 561.2912475466728 MULTI CID FTMS 0 0 0 10159 186861.25 0.1108235006997592 -5 0.5760002136230469 19 Unmodified _MPYQEIKNV_ ENSG00000131504|ENST00000389054|DIAPH1;nc|ENSG00000131504|O60610-2|DIAPH1;nc|ENSG00000131504|O60610-3|DIAPH1 93.16586880292088 0.0136995152735431 4 MPYQE{I|L}KNV 9 0 + 83.988 0.0 0.0 7.4952 7.4952 90.766 0.0 0.0 0.0 46.18568627645774 12.96311164755508 12.96311164755508 9.208187539523747 0 1.7571810378154735 1.0969100130080565 0.0 1.7856668758921828 + + MPYQE{I|L}KNV;MPY[AG]E{I|L}KNV;MPYQE{I|L}KGGV;MPY[AG]E{I|L}KGGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QE{I|L}MK{[NV]|[RG]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEM{I|L}K{[NV]|[RG]};M[KG]V[WC(Carbamidomethyl (C))]KNV;[YQ]EP{I|L}MK{[NV]|[RG]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]E{I|L}MK{[NV]|[RG]};[YQ]EPM{I|L}K{[NV]|[RG]} 7.4952;6.6734;6.3831;5.5653;4.0273;3.8918;3.4331;3.292;3.2056;3.1565 +;-;-;-;-;-;-;-;-;- + 2102 + 1 1.602 69960.8 1.0 5533 4643 10159 HBL1_DMSO_200M_050219_2,10178 HBL1_DMSO_200M_050219_2,10178,MPYQEIKNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10179 55.226 781.0 120950.0 25 0 9041.0 + 8011 EMMEKKDEQFY 11 114 739.3213638527 0 739.3220703005791 PEAK CID FTMS 0 0 0 10159 162419.09375 0.9352607622735172 -1 0.0810775756835937 20 Unmodified _EMMEKKDEQFY_ REV__ENSG00000102174|ENST00000379374|PHEX 5.731851221503515 0.47618401536486 4 ANQQAEDH 8 -1 56.905 0.0 0.0 3.8537 0.0 0.0 328.14287991478983 252.10032068424064 580.2432005990305 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 1.2302046884880935 ANQQAEDH 3.8537 - 881 + 1 1.602 71885.4 1.0 5534 4643 10159 HBL1_DMSO_200M_050219_2,10179 HBL1_DMSO_200M_050219_2,10179,EMMEKKDEQFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10181 55.23 9.4 5810600.0 25 0 1116300.0 + 30430 RDALDLVYV 9 69 532.2929079530511 1062.571262972902 2 532.2930175662041 MULTI CID FTMS 0 0 0 10180 5768865.0 0.7023299296704024 1 -0.0849838256835937 1 Unmodified _RDALDLVYV_ REV__ENSG00000198060|ENST00000358935|MARCHF5 12.240655878213236 0.5053430591993562 4 V{I|L}YV 4 -1 39.24 0.0 0.0 3.693 0.0 0.0 570.27836806465 0.0 570.27836806465 0.0 29.77629699328141 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 V{I|L}YV 3.693 - 21 1 1.596 48478.3 1.0 5535 4644 10180 HBL1_DMSO_200M_050219_2,10181 HBL1_DMSO_200M_050219_2,10181,RDALDLVYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10182 55.231 26.0 2296300.0 25 0 253160.0 + 3042 AVLDRMHSL 9 81 347.85536419867736 1040.544263196232 3 347.8551208376884 MULTI CID FTMS 0 0 0 10180 1849378.625 0.6465816242692921 1 -0.0849838256835937 2 Unmodified _AVLDRMHSL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 46.020951573049366 0.0490941689151868 4 MHS{I|L}VA 6 7 32.115 0.0 0.0 3.0864 0.0 0.0 384.2131520001969 0.0 384.2131520001969 0.0 14.27973281300014 0.0 0.0 0 0.0 0.0 0.0 0.0 MHS{I|L}VA 3.0864 - 134 1 1.596 57431.7 1.0 5536 4644 10180 HBL1_DMSO_200M_050219_2,10182 HBL1_DMSO_200M_050219_2,10182,AVLDRMHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10183 55.233 19.0 2536100.0 25 0 289620.0 + 44989 YPSETFTRV 9 64 550.2746716014435 1098.534790269687 2 550.2747680544853 MULTI CID FTMS 0 0 0 10180 2813267.75 0.2826907579069008 -4 0.4236907958984375 3 Unmodified _YPSETFTRV_ ENSG00000164109|ENST00000296509|MAD2L1;ENST00000511295.1_1_4:120986776-120987958:-|nuORF;nc|ENSG00000164109|Q13257-2|MAD2L1 29.84058131909904 0.1515068451768857 4 YPSET{M(Oxidation (M))|F} 6 3 74.641 0.0 0.0 6.7946 0.0 0.0 0.0 371.2049349420532 371.2049349420532 50.0532071975305 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7742275032520141 0.0 + YPSET{M(Oxidation (M))|F} 6.7946 + + 140 + 1 1.596 47137.5 1.0 5537 4644 10180 HBL1_DMSO_200M_050219_2,10183 HBL1_DMSO_200M_050219_2,10183,YPSETFTRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10184 55.234 58.0 565580.0 25 0 44997.0 43529 WWWWIWWQWW 10 47 874.9041028402406 1747.7936527472812 2 875.4047729372978 MULTI CID FTMS 0 0 0 10180 905575.0625 0.311212440558153 4 -0.3299827575683594 4 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 4 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 8 31.643 0.0 0.0 1.8105 0.0 0.0 862.4297469743271 0.0 862.4297469743271 0.0 12.390690719683093 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 1.8105 - 78 1 1.596 29730.0 1.0 5538 4644 10180 HBL1_DMSO_200M_050219_2,10184 HBL1_DMSO_200M_050219_2,10184,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 10185 55.236 65.0 652300.0 25 0 86018.0 + -1 CVCVSWLGV 9 79 511.7444852532993 1021.4744175733986 2 511.7447387576103 MULTI CID FTMS 0 0 0 10180 829809.25 0.6746405011292155 -2 0.1721267700195312 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))VCVSWLGV_ REV__ENST00000329608.10_2_1:110453327-110453405:+|nuORF 8.593279151180031 0.6146971463335029 4 GV 2 -1 17.959 0.0 0.0 1.7581 0.0 0.0 847.3735550019127 0.0 847.3735550019127 0.0 2.764618041732448 0.0 0.0 0 0.0 0.0 0.0 0.0 GV 1.7581 + + 99 + 1 1.596 38393.5 1.0 5539 4644 10180 HBL1_DMSO_200M_050219_2,10185 HBL1_DMSO_200M_050219_2,10185,CVCVSWLGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10186 55.237 28.0 1264500.0 25 0 64974.0 + 26696 NYNPAQQAF 9 70 526.7434809142165 1051.472408895233 2 526.7437621951103 MULTI CID FTMS 0 0 0 10180 738395.25 0.1839583270920427 -4 0.4236907958984375 6 Unmodified _NYNPAQQAF_ ENSG00000111596|ENST00000229195|CNOT2;nc|ENSG00000111596|Q9NZN8-2|CNOT2;nc|ENSG00000111596|Q9NZN8-3|CNOT2;nc|ENSG00000111596|Q9NZN8-5|CNOT2 16.942295170755138 0.3780752226737986 4 [YN]N 3 6 25.328 0.0 0.0 2.4088 0.0 0.0 0.0 657.2993186454861 657.2993186454861 8.338643257751464 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.2396518287104437 + [YN]N 2.4088 + + 55 1 1.596 36094.4 1.0 5540 4644 10180 HBL1_DMSO_200M_050219_2,10186 HBL1_DMSO_200M_050219_2,10186,NYNPAQQAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10187 55.239 104.0 584370.0 25 0 64144.0 + 1281 AIQDEIRSV 9 91 515.7803887000345 1029.5462244668688 2 515.7806884646416 MULTI CID FTMS 0 0 0 10180 590124.5625 1.0 0 0.0 7 Unmodified _AIQDEIRSV_ ENSG00000164109|ENST00000296509|MAD2L1;ENST00000504707.1_1_4:120981275-120987923:-|nuORF 31.26834338654808 0.1333407332142048 4 [{I|L}A]QDE{I|L}RSV 9 0 + 64.441 0.0 0.0 6.2592 6.2592 87.29 0.0 0.0 0.0 53.84518834020879 5.100419382941411 5.100419382941411 9.208187539523756 0 0.3807196863200844 2.0 0.5 0.3807196863200844 + + [{I|L}A]QDE{I|L}RSV;[{I|L}A][AG]DE{I|L}RSV;[{I|L}A]Q[YT][HA]KV 6.2592;5.3648;2.7108 +;-;- + 89 + 1 1.596 52655.3 1.0 5541 4644 10180 HBL1_DMSO_200M_050219_2,10187 HBL1_DMSO_200M_050219_2,10187,AIQDEIRSV False True AIQDEIRSV 55.238997 515.780688464642 4190827.25 10180.0 ENST00000504707.1_1_4:120981275-120987923:-|nuORF;;ENSG00000164109|ENST00000296509|MAD2L1 5.182380040486653 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10188 55.242 169.0 379650.0 25 0 44467.0 + 26651 NYHWQETAY 9 103 606.259451527316 1210.5043501214318 2 606.2592040896416 MULTI CID FTMS 0 0 0 10180 505707.65625 0.7135212576944526 -1 0.0910491943359375 8 Unmodified _NYHWQETAY_ ENSG00000184979|ENST00000215794|USP18;nc|ENSG00000184979|Q9UMW8-2|USP18 37.97399986684836 0.0865783450051559 4 [WH]QYNETAY 9 4 + 57.514 0.0 0.0 4.7512 4.7512 72.972 0.0 0.0 0.0 9.232712163289278 29.533248988790817 9.232712163289278 3.187587626244124 0 0.8935078169319297 1.3010299956639813 0.5 0.4247425010840047 [WH]QYNETAY;[WH][YN]QETAY;[WH][AG]YNETAY;[WH]QYGGETAY;[WH]QE[YN]TAY;[WH][YN][AG]ETAY;[DP]{[DS]|[MA]|[CV]|TT}WQETAY;[WQ]HYNETAY;[WH][AG]E[YN]TAY;[WH][AG]YGGETAY 4.7512;4.4879;3.9906;3.9906;3.7419;3.7272;3.6819;3.4278;2.9812;2.8826 -;-;-;-;-;-;-;-;-;- 552 1 1.596 51681.2 1.0 5542 4644 10180 HBL1_DMSO_200M_050219_2,10188 HBL1_DMSO_200M_050219_2,10188,NYHWQETAY True True NYHWQETAY 55.242318 606.259204089642 13088806.0 10180.0 ENSG00000184979|ENST00000215794|USP18;;nc|ENSG00000184979|Q9UMW8-2|USP18 9.024789174397789 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10189 55.244 89.0 460050.0 25 0 46132.0 + 22742 LQLDGARQL 9 80 507.29145345278056 1012.5683539723613 2 507.2910034060478 MULTI CID FTMS 0 0 0 10180 420832.25 0.4301573900963672 2 -0.1836128234863281 9 Unmodified _LQLDGARQL_ REV__ENST00000592220.1_1_19:34917242-34919163:-|nuORF 9.38312468134398 0.5871240394367778 4 [Q{I|L}]{I|L}D 4 -1 16.682 0.0 0.0 1.6475 0.0 0.0 0.0 540.2892550104124 540.2892550104124 6.928527761275127 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [Q{I|L}]{I|L}D 1.6475 + + 47 + 1 1.596 38610.9 1.0 5543 4644 10180 HBL1_DMSO_200M_050219_2,10189 HBL1_DMSO_200M_050219_2,10189,LQLDGARQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10190 55.248 195.0 433010.0 25 0 57908.0 + 12852 GVVGGSDFEKV 11 104 547.2808946470664 1092.5472363609326 2 547.2808715701103 MULTI CID FTMS 0 0 0 10180 419407.96875 0.6401358526692902 -1 0.0910491943359375 10 Unmodified _GVVGGSDFEKV_ ENSG00000140650|ENST00000268261|PMM2;ENST00000564030.5_1_16:8891706-8900277:+|nuORF;nc|ENSG00000140650|O15305-2|PMM2 39.21299971606389 0.2245192836502623 4 [VG]VGGSD{M(Oxidation (M))|F}EKV 11 0 + 88.175 0.0 0.0 8.0706 8.0706 88.866 0.0 0.0 0.0 52.73731623260584 10.182005187013786 10.182005187013786 6.575773191777927 0 0.7742275032520141 2.0 0.805462187404089 0.2215141619232908 + + [VG]VGGSD{M(Oxidation (M))|F}EKV;[VG]VNSD{M(Oxidation (M))|F}EKV;[VG]RGSD{M(Oxidation (M))|F}EKV;RV[C(Carbamidomethyl (C))M][TA]EKV;RC(Carbamidomethyl (C)){[ET]|[MV]}[TA]EKV;RV[C(Carbamidomethyl (C))M]RRC{I|L};RC(Carbamidomethyl (C)){[ET]|[MV]}RRC{I|L} 8.0706;7.4688;6.8004;4.3118;3.0924;1.2699;0.39899 +;-;-;-;-;-;- + 292 + 1 1.596 74380.3 1.0 5544 4644 10180 HBL1_DMSO_200M_050219_2,10190 HBL1_DMSO_200M_050219_2,10190,GVVGGSDFEKV False True GVVGGSDFEKV 55.24803 547.28087157011 4094299.5 10180.0 ENST00000564030.5_1_16:8891706-8900277:+|nuORF;;nc|ENSG00000140650|O15305-2|PMM2;;ENSG00000140650|ENST00000268261|PMM2 7.568445205688477 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10191 55.253 284.0 640630.0 25 0 67690.0 -1 0 184 318.1912917551504 317.1840152885504 1 318.1913329958916 MULTI CID FTMS 0 0 0 10180 296933.125 0.6388915317384567 -10 0.9899978637695312 11 4 {I|L} 1 -1 9.5329 0.0 0.0 3.0055 0.0 0.0 186.0889815744863 0.0 186.0889815744863 0.0 9.255304934939666 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.0055 - 17 + 1 1.596 149882.0 1.0 5545 4644 10180 HBL1_DMSO_200M_050219_2,10191 HBL1_DMSO_200M_050219_2,10191, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10192 55.256 160.0 614930.0 25 0 79323.0 + -1 TLMEVMEE 8 135 499.2154334702001 996.4163140072002 2 499.2159301638603 MULTI CID FTMS 0 0 0 10180 253527.4375 0.9766971813381218 -1 0.0910491943359375 12 Oxidation (M) _TLMEVM(Oxidation (M))EE_ REV__ENSG00000204843|ENST00000628224|DCTN1;REV__ENST00000466110.5_1_2:74595806-74598423:-|nuORF;REV__nc|ENSG00000204843|Q14203-2|DCTN1;REV__nc|ENSG00000204843|Q14203-3|DCTN1;REV__nc|ENSG00000204843|Q14203-4|DCTN1;REV__nc|ENSG00000204843|Q14203-5|DCTN1;REV__nc|ENSG00000204843|Q14203-6|DCTN1 23.1484247019978 0.5573009939494978 4 [{I|L}T]ME[C(Carbamidomethyl (C))N]MV 8 -1 + 40.896 0.0 0.0 4.1043 4.1043 81.403 0.0 0.0 0.0 27.400859611852653 0.1772876696043113 0.1772876696043113 18.45676832885701 0 0.8494850021680094 2.0 0.3807196863200844 0.0 [{I|L}T]ME[C(Carbamidomethyl (C))N]MV;[{I|L}T]D{M(Oxidation (M))|F}[C(Carbamidomethyl (C))Q]T{I|L};{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EMPV;[{M(Oxidation (M))|F}T][C(Carbamidomethyl (C))N]EMPV;[QA][YC(Carbamidomethyl (C))]EMPV;{[VA]|[{I|L}G]}[CS]{[C(Carbamidomethyl (C))E]|[WC]}DT{I|L};{[TV]|[{I|L}S]}C(Carbamidomethyl (C)){[C(Carbamidomethyl (C))E]|[WC]}DT{I|L};{[CA]|SS}[HN][EP]MPV;{[CA]|SS}[C(Carbamidomethyl (C))C][{I|L}T]MPV 4.1043;2.252;2.168;1.4384;1.2126;0.88076;0.64708;0.17399;0.13425 -;-;-;-;-;-;-;-;- 364 + 1 1.596 77257.9 1.0 5546 4644 10180 HBL1_DMSO_200M_050219_2,10192 HBL1_DMSO_200M_050219_2,10192,TLMEVMEE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10193 55.269 749.0 248290.0 25 0 28102.0 + 44505 YPATEHRDLLV 11 155 438.5665808046038 1312.6779130140114 3 438.5665161013603 MULTI CID FTMS 0 0 0 10180 251082.015625 0.8747540285748192 2 -0.1836128234863281 13 Unmodified _YPATEHRDLLV_ ENSG00000138180|ENST00000371485|CEP55 66.61675797227278 0.0422914471598608 4 YPATE{NN|[MP]|[D{I|L}]|[EV]}[RH]{I|L}V 11 4 + 61.864 0.0 0.0 4.7128 4.7128 82.619 0.0 0.0 0.0 14.85532334037142 2.8694824752620107 2.8694824752620107 12.83809673312028 0 1.4916440611282624 2.0 0.6549471895720985 0.0 YPATE{NN|[MP]|[D{I|L}]|[EV]}[RH]{I|L}V;YPATE{NN|[MP]|[D{I|L}]|[EV]}[RH]V{I|L};[PA][EP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AP{I|L}{I|L}YV;[PA][EP][WE]P{I|L}{I|L}YV;[PA][EP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AP{I|L}Y{I|L}V;[PA][EP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{I|L}P{I|L}YV;[PA][EP][WE]P{I|L}Y{I|L}V;[PA][EP][WE]{I|L}P{I|L}YV;[PA][EP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AP{I|L}{I|L}VY;[PA][EP][WE]P{I|L}{I|L}VY 4.7128;3.7348;3.324;3.2789;3.1225;3.0947;3.0774;3.0496;3.0004;2.9554 -;-;-;-;-;-;-;-;-;- 3768 + 1 1.596 148364.9 1.0 5547 4644 10180 HBL1_DMSO_200M_050219_2,10193 HBL1_DMSO_200M_050219_2,10193,YPATEHRDLLV True True YPATEHRDLLV 55.269339 438.56651610136 11304883.5 10180.0 ENSG00000138180|ENST00000371485|CEP55 7.572125275929769 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10194 55.283 800.0 379860.0 25 0 43834.0 + 43839 YFHDRVASF 9 245 381.18614349469846 1140.5366010842954 3 381.1857787966728 MULTI CID FTMS 0 0 0 10180 180484.8125 0.6680447405556712 -2 0.1721267700195312 14 Unmodified _YFHDRVASF_ ENSG00000164654|ENST00000340080|MIOS;nc|ENSG00000164654|Q9NXC5-2|MIOS 57.72198328787511 0.0273433238377839 4 [R{I|L}]YGHYAD{M(Oxidation (M))|F} 9 7 + 39.759 0.0 0.0 3.486 3.486 66.33 0.0 0.0 0.0 1.940337777294345 16.151243539087588 1.940337777294345 2.04119982655925 0 0.0 0.8538719643217619 0.3807196863200844 0.0 [R{I|L}]YGHYAD{M(Oxidation (M))|F};[R{I|L}]YGWNAD{M(Oxidation (M))|F};[R{I|L}]W[C(Carbamidomethyl (C))C]VAS{M(Oxidation (M))|F};[R{I|L}]YGHYW{M(Oxidation (M))|F};[R{I|L}]YGHADY{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}Y[RD]VAS{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}]H[RD]VAS{M(Oxidation (M))|F};[HD]K[TP]S{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[HD]QVVS{M(Oxidation (M))|F}Y{M(Oxidation (M))|F};[R{I|L}]YGWNW{M(Oxidation (M))|F} 3.486;3.307;3.217;3.197;3.1927;3.0851;3.0743;3.0364;3.0256;3.018 -;-;-;-;-;-;+;-;-;- + 3595 1 1.596 236273.0 0.8100000023841858 5548 4644 10180 HBL1_DMSO_200M_050219_2,10194 HBL1_DMSO_200M_050219_2,10194,YFHDRVASF True True YFHDRVASF 55.283153 381.185778796673 2278059.25 10180.0 nc|ENSG00000164654|Q9NXC5-2|MIOS;;ENSG00000164654|ENST00000340080|MIOS 6.743848959604899 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10195 55.297 800.0 213760.0 25 0 15220.0 + 43192 VYWVARKPM 9 174 383.8794480713171 1148.6165148141513 3 383.8789245486259 MULTI CID FTMS 0 0 0 10180 163508.5625 0.2944165298571794 4 -0.3299827575683594 15 Unmodified _VYWVARKPM_ ENSG00000137038|ENST00000358227|DMAC1;nc|ENSG00000137038|Q96GE9|DMAC1 19.361941925380144 0.3125782356748823 4 VYWV{M(Oxidation (M))|F}K 6 4 60.878 0.0 0.0 5.3001 0.0 0.0 0.0 323.18439661197505 323.18439661197505 48.65987537940164 0.0 0.0 0.0 0 0.0 2.0 0.0 0.4247425010840047 VYWV{M(Oxidation (M))|F}K 5.3001 - 551 + 1 1.596 142735.7 0.7900000214576721 5549 4644 10180 HBL1_DMSO_200M_050219_2,10195 HBL1_DMSO_200M_050219_2,10195,VYWVARKPM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10196 55.311 800.0 201010.0 25 0 16650.0 + 22449 LPTVTTNV 8 188 422.7425991072309 843.4706452812618 2 422.7424804568291 MULTI CID FTMS 0 0 0 10180 134136.6875 0.874600954784605 -2 0.1721267700195312 16 Unmodified _LPTVTTNV_ ENSG00000111247|ENST00000352618|RAD51AP1;nc|ENSG00000111247|Q96B01-3|RAD51AP1;nc|ENSG00000111247|Q96B01|RAD51AP1 49.66892048692302 0.1408045912742846 4 [{I|L}P]ST{I|L} 5 5 23.153 0.0 0.0 2.745 0.0 0.0 0.0 329.14756522237866 329.14756522237866 0.5119775203373749 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.305462187404089 0.0 [{I|L}P]ST{I|L} 2.745 - 494 1 1.596 124601.2 0.7599999904632568 5550 4644 10180 HBL1_DMSO_200M_050219_2,10196 HBL1_DMSO_200M_050219_2,10196,LPTVTTNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10198 55.325 614.0 226390.0 25 0 17149.0 + 12126 GQISDRPSLSV 11 154 579.8082132005682 1157.6018734679362 2 579.8090087771416 MULTI CID FTMS 0 0 0 10197 195568.46875 0.4484777304422953 3 -0.2449989318847656 1 Unmodified _GQISDRPSLSV_ ENSG00000239961|ENST00000291759|LILRA4;nc|ENSG00000239961|P59901-2|LILRA4 36.39500950444726 0.267929034476522 4 YYE{I|L}[YK]{I|L}G 8 10 49.088 0.0 0.0 4.2405 0.0 0.0 0.0 125.03612695865468 125.03612695865468 15.113603936021631 0.0 0.0 0.0 0 1.0 2.0 0.3494850021680094 0.0 YYE{I|L}[YK]{I|L}G 4.2405 - 1326 + 1 1.591 104871.3 1.0 5551 4645 10197 HBL1_DMSO_200M_050219_2,10198 HBL1_DMSO_200M_050219_2,10198,GQISDRPSLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10199 55.326 27.0 2227500.0 25 0 211180.0 + 14442 IFQNIKQEY 9 102 591.8118041666739 1181.6090554001478 2 591.8116332888603 MULTI CID FTMS 0 0 0 10197 1995816.125 0.7073792639387997 -1 0.0849838256835937 2 Unmodified _IFQNIKQEY_ ENSG00000174574|ENST00000432648|AKIRIN1;nc|ENSG00000174574|Q9H9L7-2|AKIRIN1 60.07390631473393 0.0260411565414776 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QN{I|L}[QT]RY 9 2 + 55.493 0.0 0.0 4.6964 4.6964 73.517 0.0 0.0 0.0 3.6535656654828585 3.6535656654828585 3.6535656654828585 3.6535656654828585 0 1.4802046884880935 0.0 0.3807196863200844 0.5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QN{I|L}[QT]RY;{[QN]|[E{I|L}]|[KN]}{I|L}[NP]{I|L}NQ{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QGG{I|L}[QT]RY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]N{I|L}[QT]RY;{[QN]|[E{I|L}]|[KN]}{I|L}[NP]{I|L}GGQ{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{I|L}[NP]{I|L}N[AG]{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QN[WR]RY;{[QV]|[N{I|L}]|[RA]|[KV]}Q[NP]{I|L}NQ{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}[YK]Q{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}[YQ]Q{[QN]|[E{I|L}]|[KN]} 4.6964;4.3872;3.9171;3.9171;3.6116;3.6116;3.5302;3.4222;3.3476;3.3476 -;-;-;-;-;-;-;-;-;- 539 + 1 1.591 53308.6 1.0 5552 4645 10197 HBL1_DMSO_200M_050219_2,10199 HBL1_DMSO_200M_050219_2,10199,IFQNIKQEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10200 55.327 43.0 1112000.0 25 0 151890.0 + + 1298 KTTTIAVEV 9 76 481.28210115354767 960.5496493738954 2 481.2819091677666 MULTI CID FTMS 0 0 0 10197 1326083.25 0.8288211977401977 -6 0.6216506958007812 3 Unmodified _AITSLTKEV_ ENSG00000115677|ENST00000310931|HDLBP;ENST00000470710.1_1_2:242194755-242195742:-|nuORF 28.486842064014134 0.1687311288560894 4 {NN|[MP]|[D{I|L}]|[EV]}[KG]{I|L}AV[{M(Oxidation (M))|F}V] 9 -1 + 35.084 0.0 0.0 3.6525 3.6525 79.95 0.0 0.0 0.0 9.510905979578515 4.7362865499946665 4.7362865499946665 18.25257498915996 0 0.0 1.2218487496163564 0.5752574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KG]{I|L}AV[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}{[NV]|[RG]}{I|L}AV[{M(Oxidation (M))|F}V];{[TV]|[{I|L}S]}[VS][KT]VEV;{[TV]|[{I|L}S]}[VS]V[KT]EV;[{I|L}A][WR]AV[{M(Oxidation (M))|F}V] 3.6525;1.7523;1.7004;1.1254;0.16698 -;-;-;-;- 179 1 1.591 43200.9 1.0 5553 4645 10197 HBL1_DMSO_200M_050219_2,10200 HBL1_DMSO_200M_050219_2,10200,AITSLTKEV False False KTTTIAVEV 55.327332 481.281909167767 9660962.0 10197.0 ENSG00000115677|ENST00000310931|HDLBP;;ENST00000470710.1_1_2:242194755-242195742:-|nuORF 0.6751890778541565 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10201 55.329 58.0 935940.0 25 0 79641.0 + + 2591 SALEKSLAV 9 98 459.2685537678375 916.522554602475 2 459.2688781619072 MULTI CID FTMS 0 0 0 10197 748479.9375 0.6500987116886929 -2 0.1760330200195312 4 Unmodified _ASLVSAGLSL_ nc|ENSG00000196873|Q5JTY5-2|ZNG1C;ENST00000490323.5_1_2:114195445-114201441:+|nuORF;nc|ENSG00000172785|Q9BRT8-3|ZNG1A;ENST00000377445.5_9:69238165-69262487:-|nuORF;ENST00000476973.2_9:69243634-69261296:-|nuORF;nc|ENSG00000172785|Q9BRT8-2|ZNG1A;ENSG00000215126|ENST00000377391|ZNG1F;ENSG00000196873|ENST00000360171|ZNG1C;ENST00000492566.1_1_2:114195517-114220159:+|nuORF;nc|ENSG00000215126|Q5RIA9-3|ZNG1E;nc|ENSG00000172785|Q9BRT8-4|ZNG1A;ENSG00000136682|ENST00000259199|ZNG1B;ENSG00000147996|ENST00000382405|ZNG1E;ENST00000358604.7_1_2:114196636-114253317:+|nuORF;ENST00000470192.1_9:69256791-69261296:-|nuORF;ENST00000495626.2_9:69245151-69262487:-|nuORF;ENSG00000172785|ENST00000356521|ZNG1A 47.74868867922204 0.0933642699623533 4 {[SA]|[TG]}{I|L}VSA{I|L}TR 9 -1 + 61.969 0.0 0.0 6.7613 6.7613 76.293 0.0 0.0 0.0 19.471580313422187 8.006598581066115 8.006598581066115 0.7429465876939645 0 1.010638087671366 2.0 0.7302046884880937 0.0 {[SA]|[TG]}{I|L}VSA{I|L}TR;{[SA]|[TG]}{I|L}KE{I|L}TR;{[SA]|[TG]}{I|L}VS{I|L}ATR;[{I|L}A]SVSA{I|L}TR;[{I|L}A]SKE{I|L}TR;{[SA]|[TG]}{I|L}K[{M(Oxidation (M))|F}V]PR;[{I|L}A]SVS{I|L}ATR;{[TV]|[{I|L}S]}AVSA{I|L}TR;{[TV]|[{I|L}S]}AKE{I|L}TR;{[TV]|[{I|L}S]}AVS{I|L}ATR 6.7613;6.6802;6.1878;4.6368;4.5557;4.1181;4.0633;3.513;3.4319;2.9396 -;-;-;-;-;-;-;-;-;- 334 1 1.591 49046.8 1.0 5554 4645 10197 HBL1_DMSO_200M_050219_2,10201 HBL1_DMSO_200M_050219_2,10201,ASLVSAGLSL False False SALEKSLAV 55.32878 459.268878161907 7552524.0 10197.0 nc|ENSG00000196873|Q5JTY5-2|ZNG1C;;ENST00000490323.5_1_2:114195445-114201441:+|nuORF;;nc|ENSG00000172785|Q9BRT8-3|ZNG1A;;ENST00000377445.5_9:69238165-69262487:-|nuORF;;ENST00000476973.2_9:69243634-69261296:-|nuORF;;nc|ENSG00000172785|Q9BRT8-2|ZNG1A;;ENSG00000215126|ENST00000377391|ZNG1F;;ENSG00000196873|ENST00000360171|ZNG1C;;ENST00000492566.1_1_2:114195517-114220159:+|nuORF;;nc|ENSG00000215126|Q5RIA9-3|ZNG1E;;nc|ENSG00000172785|Q9BRT8-4|ZNG1A;;ENSG00000136682|ENST00000259199|ZNG1B;;ENSG00000147996|ENST00000382405|ZNG1E;;ENST00000358604.7_1_2:114196636-114253317:+|nuORF;;ENST00000470192.1_9:69256791-69261296:-|nuORF;;ENST00000495626.2_9:69245151-69262487:-|nuORF;;ENSG00000172785|ENST00000356521|ZNG1A 5.242948055267334 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10202 55.331 89.0 886320.0 25 0 85876.0 + + 13776 AFIDTAQHM 9 107 516.2428474414082 1030.4711419496164 2 517.2424194216728 MULTI CID FTMS 0 0 0 10197 572352.4375 0.3641060680640388 -3 0.257110595703125 5 Unmodified _HSEFNSLPT_ ENSG00000137822|ENST00000564079|TUBGCP4;nc|ENSG00000137822|Q9UGJ1|TUBGCP4;ENST00000563963.1_1_15:43687726-43694213:+|nuORF 13.90604991867851 0.4602628045680013 4 TD{I|L}[TP] 5 -1 29.437 0.0 0.0 2.8567 0.0 0.0 485.2082691876969 0.0 485.2082691876969 0.0 9.94154594018443 0.0 0.0 0 0.0 0.0 0.9604093769761876 0.0 TD{I|L}[TP] 2.8567 - 434 1 1.591 65009.0 1.0 5555 4645 10197 HBL1_DMSO_200M_050219_2,10202 HBL1_DMSO_200M_050219_2,10202,HSEFNSLPT False False AFIDTAQHM 55.330761 517.242419421673 9012058.0 10197.0 ENSG00000137822|ENST00000564079|TUBGCP4;;nc|ENSG00000137822|Q9UGJ1|TUBGCP4;;ENST00000563963.1_1_15:43687726-43694213:+|nuORF 6.394058386484782 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10203 55.334 146.0 626470.0 25 0 58883.0 + -1 IPLYSFCRY 9 97 406.8702124882751 1217.5888080650252 3 406.8705627322197 MULTI CID FTMS 0 0 0 10197 430657.03125 0.40235479167163 -1 0.0849838256835937 6 Carbamidomethyl (C) _IPLYSFC(Carbamidomethyl (C))RY_ REV__ENSG00000089057|ENST00000338244|SLC23A2;REV__nc|ENSG00000089057|Q9UGH3-2|SLC23A2 18.373094154950223 0.3393451798331396 4 {I|L}PE{I|L}GS[KS]{[C(Carbamidomethyl (C))E]|[WC]}V 11 -1 + 65.666 0.0 0.0 5.3931 5.3931 75.516 0.0 0.0 0.0 34.546835677101456 6.690067809585763 6.690067809585763 3.01029995663982 0 0.4247425010840047 2.0 0.0 0.5 {I|L}PE{I|L}GS[KS]{[C(Carbamidomethyl (C))E]|[WC]}V;{I|L}P{I|L}EGS[KS]{[C(Carbamidomethyl (C))E]|[WC]}V;{I|L}PE{I|L}GS[KS][C(Carbamidomethyl (C))D]{I|L};{I|L}P{I|L}GES[KS]{[C(Carbamidomethyl (C))E]|[WC]}V;{I|L}P{I|L}EGS[KS][C(Carbamidomethyl (C))D]{I|L};{I|L}P{I|L}GES[KS][C(Carbamidomethyl (C))D]{I|L};{I|L}EP{I|L}GS[KS]{[C(Carbamidomethyl (C))E]|[WC]}V;{I|L}EP{I|L}GS[KS][C(Carbamidomethyl (C))D]{I|L};[{I|L}P]G[HQ]G{I|L}E[SG][HS];[PG][HD][KS]SG{I|L}P[HS] 5.3931;5.1459;4.8437;4.6514;4.5965;4.102;3.7936;3.2441;1.9149;0.92931 -;-;-;-;-;-;-;-;-;- 435 + 1 1.591 76240.4 1.0 5556 4645 10197 HBL1_DMSO_200M_050219_2,10203 HBL1_DMSO_200M_050219_2,10203,IPLYSFCRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10204 55.336 117.0 410360.0 25 0 47480.0 + -1 LMGMIMFCL 9 89 553.7407339628379 1105.4669149924755 2 553.7415038943291 MULTI CID FTMS 0 0 0 10197 359788.9375 0.613543192986839 -2 0.1760330200195312 7 3 Oxidation (M) _LM(Oxidation (M))GM(Oxidation (M))IM(Oxidation (M))FCL_ REV__ENSG00000109255|ENST00000264218|NMU;REV__ENST00000515325.5_1_4:56465315-56502750:-|nuORF 9.347437153973935 0.588369872918737 4 Y[CS]{I|L}YA[C(Carbamidomethyl (C))N]{I|L} 9 -1 + 34.843 0.0 0.0 3.1519 3.1519 67.588 0.0 0.0 0.0 20.86365002801444 1.1270428019128855 1.1270428019128855 3.010299956639816 0 0.5 0.0 0.0 0.0 Y[CS]{I|L}YA[C(Carbamidomethyl (C))N]{I|L};Y[CS]Y{I|L}A[C(Carbamidomethyl (C))N]{I|L};Y[CS]{I|L}YEES{I|L};Y[CS]{I|L}YA[NG]C{I|L};Y[CS]{I|L}AY[C(Carbamidomethyl (C))N]{I|L};Y[CS]Y{I|L}EES{I|L};Y[CS]Y{I|L}A[NG]C{I|L};Y[CS]{I|L}{M(Oxidation (M))|F}HHS{I|L};Y[CS]{I|L}AY[NG]C{I|L};Y[CS]{I|L}{M(Oxidation (M))|F}[HS]H{I|L} 3.1519;2.8796;2.7919;2.7666;2.6073;2.5196;2.4942;2.2473;2.2219;2.2098 -;-;-;-;-;-;-;-;-;- 341 + 1 1.591 42513.1 1.0 5557 4645 10197 HBL1_DMSO_200M_050219_2,10204 HBL1_DMSO_200M_050219_2,10204,LMGMIMFCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10205 55.346 575.0 386020.0 25 0 22606.0 + -1 IPLYSFCRY 9 146 609.8020529137195 1217.589552894239 2 609.8021118044853 MULTI CID FTMS 0 0 0 10197 323240.84375 0.4211529576084349 -2 0.1760330200195312 8 Carbamidomethyl (C) _IPLYSFC(Carbamidomethyl (C))RY_ REV__ENSG00000089057|ENST00000338244|SLC23A2;REV__nc|ENSG00000089057|Q9UGH3-2|SLC23A2 39.957323273325 0.0756908302845263 4 {I|L}P{I|L}GESV 7 -1 81.098 0.0 0.0 6.6605 0.0 0.0 0.0 519.1707247369749 519.1707247369749 38.702271536463385 0.0 0.0 0.0 0 1.274227503252014 2.0 1.2561420478726844 0.0 {I|L}P{I|L}GESV 6.6605 - 1686 + 1 1.591 163135.6 1.0 5558 4645 10197 HBL1_DMSO_200M_050219_2,10205 HBL1_DMSO_200M_050219_2,10205,IPLYSFCRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10206 55.348 84.0 748890.0 25 0 52691.0 + + 26074 TEELAYLK 8 101 482.75993265737617 963.5053123815524 2 483.7607299685478 MULTI CID FTMS 0 0 0 10197 295116.03125 0.5909523965368536 -7 0.7520332336425781 9 Unmodified _NNELFSIK_ ENSG00000186395|ENST00000269576|KRT10;P13645 13.90604991867851 0.7054780292895731 4 {NN|[MP]|[D{I|L}]|[EV]}E{I|L}AY{I|L}K 8 -1 + 27.929 0.0 0.0 2.8987 2.8987 70.446 0.0 0.0 0.0 5.484550065040281 5.698753079565613 5.484550065040281 5.698753079565613 0 0.0 0.0 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}E{I|L}AY{I|L}K;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}AYK{I|L};[{M(Oxidation (M))|F}T]RRPC(Carbamidomethyl (C))K;[{I|L}P]{[YC]|[HE]}[K{I|L}]{NN|[MP]|[D{I|L}]|[EV]} 2.8987;2.3073;0.3754;0.060292 -;-;-;- 182 + 1 1.591 51162.1 1.0 5559 4645 10197 HBL1_DMSO_200M_050219_2,10206 HBL1_DMSO_200M_050219_2,10206,NNELFSIK False False TEELAYLK 55.348084 483.760729968548 2544386.5 10197.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 6.438161929448445 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10207 55.36 674.0 209450.0 25 0 16132.0 + + 1451 VNVDEVGGEALGR 13 139 657.8362364226183 0 657.8356811404228 PEAK CID FTMS 0 0 0 10197 244991.46875 1.0 0 0.0 10 Unmodified _ALENEVDQRLQ_ ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 35.61225514009592 0.1724521961472362 4 NVDEVGGEA{I|L} 10 -1 69.182 0.0 0.0 5.2663 0.0 0.0 99.072545011449 228.10991846256096 327.18246347401 0.0 0.0 0.0 0.0 0 2.309894379144197 0.0 0.7742275032520141 0.0 NVDEVGGEA{I|L} 5.2663 - 2646 + 1 1.591 104840.2 1.0 5560 4645 10197 HBL1_DMSO_200M_050219_2,10207 HBL1_DMSO_200M_050219_2,10207,ALENEVDQRLQ False False VNVDEVGGEALGR 55.35983 657.835681140423 1924305.625 10197.0 ENSG00000244734|ENST00000335295|HBB;;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 9.018398920694986 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10208 55.362 111.0 645420.0 25 0 59235.0 + -1 HLFTMYRS 8 115 357.50694308011686 1069.4989998405506 3 357.5065185427666 MULTI CID FTMS 0 0 0 10197 223861.0625 0.923725967961064 -2 0.1760330200195312 11 Oxidation (M) _HLFTM(Oxidation (M))YRS_ REV__ENSG00000187240|ENST00000375735|DYNC2H1;REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 7.289230182591677 0.7800870086367542 4 [H{I|L}]S{I|L}{M(Oxidation (M))|F}S 6 -1 25.072 0.0 0.0 2.3443 0.0 0.0 0.0 382.1059694052569 382.1059694052569 11.576987545858096 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 [H{I|L}]S{I|L}{M(Oxidation (M))|F}S 2.3443 - 252 1 1.591 68474.8 1.0 5561 4645 10197 HBL1_DMSO_200M_050219_2,10208 HBL1_DMSO_200M_050219_2,10208,HLFTMYRS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10209 55.367 276.0 384240.0 25 0 32224.0 -1 VYIEHRLMM 9 140 403.20368111756335 1206.58921395289 3 403.2034179568291 MULTI CID FTMS 0 0 0 10197 197437.4375 1.0 0 0.0 12 Oxidation (M) _VYIEHRLM(Oxidation (M))M_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-2|MCM7 18.373094154950223 0.3393451798331396 4 V[Y{I|L}]EHY[PG]{I|L} 9 -1 24.103 0.0 0.0 1.9976 0.0 0.0 0.0 132.04592310123283 132.04592310123283 6.399699876253781 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V[Y{I|L}]EHY[PG]{I|L} 1.9976 - 404 + 1 1.591 83143.9 1.0 5562 4645 10197 HBL1_DMSO_200M_050219_2,10209 HBL1_DMSO_200M_050219_2,10209,VYIEHRLMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10210 55.372 248.0 397590.0 25 0 25434.0 + 9976 FPHHGTFEV 9 133 535.7571045500875 1069.499656166975 2 535.7565795779228 MULTI CID FTMS 0 0 0 10197 204077.671875 0.8829077574647478 1 -0.0986289978027343 13 Unmodified _FPHHGTFEV_ ENSG00000042429|ENST00000251871|MED17;ENST00000529626.2_2_11:93526850-93527054:+|nuORF 60.07390631473393 0.0260411565414776 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AHHP{M(Oxidation (M))|F}EV 9 4 + 47.501 0.0 0.0 4.4414 4.4414 77.283 0.0 0.0 0.0 7.832908900360543 8.880001691212101 7.832908900360543 7.832908900360543 0 0.6747425010840047 1.154901959985743 0.6307196863200843 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AHHP{M(Oxidation (M))|F}EV;{NN|[MP]|[D{I|L}]|[EV]}[DV]HP{M(Oxidation (M))|F}EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AHHPE{M(Oxidation (M))|F}V;{[SA]|[TG]}{M(Oxidation (M))|F}HHP{M(Oxidation (M))|F}EV;{NN|[MP]|[D{I|L}]|[EV]}{[DA]|[EG]}[YV]{M(Oxidation (M))|F}EV;[VP][MD]HP{M(Oxidation (M))|F}EV;[{M(Oxidation (M))|F}T]GHHP{M(Oxidation (M))|F}EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AHEHP{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH{[SA]|[TG]}{M(Oxidation (M))|F}EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AHHEP{M(Oxidation (M))|F}V 4.4414;3.709;3.3406;3.3155;3.211;3.1229;2.9434;2.9216;2.8577;2.8475 -;-;-;-;-;-;-;-;+;- + 1096 1 1.591 81151.1 1.0 5563 4645 10197 HBL1_DMSO_200M_050219_2,10210 HBL1_DMSO_200M_050219_2,10210,FPHHGTFEV True True FPHHGTFEV 55.37188 535.756579577923 4519337.0 10197.0 ENSG00000042429|ENST00000251871|MED17;;ENST00000529626.2_2_11:93526850-93527054:+|nuORF 3.951272169748942 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10211 55.387 800.0 266250.0 25 0 15529.0 + 39966 VGAPKPGP 8 235 361.7142634042221 721.4139738752441 2 361.7132140994072 MULTI CID FTMS 0 0 0 10197 193312.046875 1.0 0 0.0 14 Unmodified _VGAPKPGP_ REV__ENST00000459704.6_1_20:61593743-61595647:+|nuORF 0.7936320650641473 0.8195151834710337 4 A{I|L}R{I|L}SY 6 -1 + 70.495 0.0 0.0 9.7717 9.7717 95.445 0.0 0.0 0.0 11.003501351953858 11.003501351953858 11.003501351953858 11.003501351953858 0 1.548455006504028 1.6989700043360187 0.2614393726401688 0.0 A{I|L}R{I|L}SY;[{I|L}A]R{I|L}SY;[R{I|L}]A{I|L}SY;[{I|L}A][K{I|L}]DY;VV[RV]SY;[R{I|L}]{[TV]|[{I|L}S]}AY;{[TV]|[{I|L}S]}[R{I|L}]AY 9.7717;8.2465;5.9357;4.9542;3.1452;1.6745;0.51619 -;-;-;-;-;-;- 108 + 1 1.591 164370.6 0.8199999928474426 5564 4645 10197 HBL1_DMSO_200M_050219_2,10211 HBL1_DMSO_200M_050219_2,10211,VGAPKPGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10212 55.396 493.0 185270.0 25 0 12467.0 + 3682 DAFDQKFSKV 10 142 395.5359984633718 1183.5861659903155 3 395.5361816287041 MULTI CID FTMS 0 0 0 10197 99885.5390625 1.0 0 0.0 15 Unmodified _DAFDQKFSKV_ ENSG00000198356|ENST00000357332|GET3;ENST00000590633.1_1_19:12848319-12856427:+|nuORF 8.751783647060863 0.6861543715548071 4 {[{M(Oxidation (M))|F}D]|MM}[R{I|L}]KE 6 7 15.29 0.0 0.0 1.2919 0.0 0.0 0.0 392.1313566022317 392.1313566022317 2.19151233673003 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.0 {[{M(Oxidation (M))|F}D]|MM}[R{I|L}]KE 1.2919 - 91 1 1.591 76553.8 1.0 5565 4645 10197 HBL1_DMSO_200M_050219_2,10212 HBL1_DMSO_200M_050219_2,10212,DAFDQKFSKV False True DAFDQKFSKV 55.395569 395.536181628704 657731.9375 10197.0 ENSG00000198356|ENST00000357332|GET3;;ENST00000590633.1_1_19:12848319-12856427:+|nuORF 6.537569999694824 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10213 55.409 800.0 83932.0 25 0 5360.9 + 14267 IEGFVEFRDR 10 103 634.3247088045098 1266.6348646758197 2 634.3249999880791 MULTI CID FTMS 0 0 0 10197 91767.4609375 1.0 0 0.0 16 Unmodified _IEGFVEFRDR_ REV__ENSG00000109819|ENST00000264867|PPARGC1A;REV__ENST00000509702.5_1_4:23766811-23826805:-|nuORF;REV__nc|ENSG00000109819|Q9UBK2-3|PPARGC1A;REV__nc|ENSG00000109819|Q9UBK2-4|PPARGC1A;REV__nc|ENSG00000109819|Q9UBK2-9|PPARGC1A 14.838274106304384 0.5985701837916485 4 [{I|L}T][MT]VSNT 8 -1 23.069 0.0 0.0 1.8213 0.0 0.0 0.0 416.2015725543742 416.2015725543742 11.286686298862616 0.0 0.0 0.0 0 0.3182503180159344 1.154901959985743 1.6989700043360187 0.0 [{I|L}T][MT]VSNT 1.8213 - 515 1 1.591 55476.6 0.7099999785423279 5566 4645 10197 HBL1_DMSO_200M_050219_2,10213 HBL1_DMSO_200M_050219_2,10213,IEGFVEFRDR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10215 55.414 4.8 11885000.0 25 0 1304000.0 + 41189 VPDTSRIYV 9 69 525.2850203801842 1048.5554878271682 2 525.2855102419853 MULTI CID FTMS 0 0 0 10214 10583384.0 0.9301805432240084 -1 0.0986289978027343 1 Unmodified _VPDTSRIYV_ ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT 32.78568957990786 0.1150597335874693 4 VPDT 4 5 55.578 0.0 0.0 5.3004 0.0 0.0 0.0 633.3371720195616 633.3371720195616 19.15853297939612 0.0 0.0 0.0 0 0.2887254899964357 1.3010299956639813 0.7742275032520141 0.0 + VPDT 5.3004 + + 123 + 1 1.591 55609.0 1.0 5567 4646 10214 HBL1_DMSO_200M_050219_2,10215 HBL1_DMSO_200M_050219_2,10215,VPDTSRIYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10216 55.415 21.0 3027100.0 25 0 302630.0 + 4166 DAPHPPLKI 9 79 329.85914441787924 986.5556038538376 3 329.8588439822197 MULTI CID FTMS 0 0 0 10214 1926855.375 0.0503554882141542 4 -0.2989006042480469 2 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 30.63653989081413 0.1413794767160703 4 {[DA]|[EG]}PHPP{I|L}K{I|L} 9 0 + 56.604 0.0 0.0 5.7376 5.7376 89.917 0.0 0.0 0.0 45.18437578952155 11.440558981460017 11.440558981460017 56.60435907134756 0 0.3252574989159953 2.0 0.0 0.2887254899964357 + + {[DA]|[EG]}PHPP{I|L}K{I|L} 5.7376 + + 37 + 1 1.591 54515.0 1.0 5568 4646 10214 HBL1_DMSO_200M_050219_2,10216 HBL1_DMSO_200M_050219_2,10216,DAPHPPLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10217 55.416 13.0 5892700.0 25 0 759750.0 + 20147 LKPGILPVPK 10 77 531.3577281216423 1060.7009033100844 2 531.3578979372978 MULTI CID FTMS 0 0 0 10214 4285681.5 0.7519532322618578 -2 0.1836128234863281 3 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 24.881564428377168 0.4096545554397951 4 K{I|L}AP{I|L}VKD{I|L} 9 -1 76.807 0.0 0.0 7.2412 0.0 0.0 0.0 80.05133997134999 80.05133997134999 59.6277502416482 0.0 0.0 0.0 0 2.0 0.0 0.75 0.0 K{I|L}AP{I|L}VKD{I|L} 7.2412 - 270 + 1 1.591 68841.0 1.0 5569 4646 10214 HBL1_DMSO_200M_050219_2,10217 HBL1_DMSO_200M_050219_2,10217,LKPGILPVPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10218 55.417 15.0 4334300.0 25 0 907180.0 + 3803 DAIITKASI 9 83 466.2767052196744 930.5388575061488 2 466.2768432497978 MULTI CID FTMS 0 0 0 10214 4042407.0 0.8740913997374098 -1 0.0986289978027343 4 Unmodified _DAIITKASI_ ENSG00000124422|ENST00000261497|USP22;nc|ENSG00000124422|Q9UPT9-2|USP22 38.17557092003332 0.0854718145212029 4 {[DA]|[EG]}{I|L}{I|L}T[KA]S{I|L} 9 0 + 61.431 0.0 0.0 6.6017 6.6017 93.356 0.0 0.0 0.0 28.28273546346768 1.4703230897118047 1.4703230897118047 61.43108561839551 0 0.9247425010840048 2.0 0.8494850021680094 0.0 + + {[DA]|[EG]}{I|L}{I|L}T[KA]S{I|L} 6.6017 + + 247 + 1 1.591 54797.3 1.0 5570 4646 10214 HBL1_DMSO_200M_050219_2,10218 HBL1_DMSO_200M_050219_2,10218,DAIITKASI True True DAIITKASI 55.417298 466.276843249798 29028744.0 10214.0 ENSG00000124422|ENST00000261497|USP22;;nc|ENSG00000124422|Q9UPT9-2|USP22 2.795644044876098 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10219 55.418 14.0 3956200.0 25 0 1002500.0 + 9945 FPGKHFQEI 9 81 368.19447723393614 1101.5616023020084 3 368.1942321658134 MULTI CID FTMS 0 0 0 10214 3543019.75 0.3673823670097243 25 -2.096961975097656 5 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 15.248480904072842 0.4239247793462406 4 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 6 + 27.625 0.0 0.0 2.5078 2.5078 74.816 0.0 0.0 0.0 12.206225184280797 2.191512336730028 2.191512336730028 9.262137858390812 0 0.0 0.0 0.5 0.5 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[AG][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}[WQ]{I|L}E 2.5078;1.6669;1.0581 -;-;- 148 + 1 1.591 51255.9 1.0 5571 4646 10214 HBL1_DMSO_200M_050219_2,10219 HBL1_DMSO_200M_050219_2,10219,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10220 55.42 19.0 2344300.0 25 0 332040.0 + 39861 VFIDKQTNL 9 71 539.3005271569796 1076.586501380759 2 539.3005859255791 MULTI CID FTMS 0 0 0 10214 2850575.25 0.6015670190856633 2 -0.1463699340820312 6 Unmodified _VFIDKQTNL_ ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1 62.57269311338072 0.0246576765497938 4 V{M(Oxidation (M))|F}{I|L}D[{M(Oxidation (M))|F}V]{I|L}[QP] 9 5 + 56.422 0.0 0.0 5.2408 5.2408 79.531 0.0 0.0 0.0 16.478174818886373 6.690067809585749 6.690067809585749 6.690067809585749 0 0.7742275032520141 0.0 0.7614393726401688 1.3494850021680094 V{M(Oxidation (M))|F}{I|L}D[{M(Oxidation (M))|F}V]{I|L}[QP];V{M(Oxidation (M))|F}{I|L}D[{M(Oxidation (M))|F}V][QP]{I|L};V{M(Oxidation (M))|F}{I|L}D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KP]V 5.2408;4.6194;4.4495 -;-;- 646 + 1 1.591 44419.6 1.0 5572 4646 10214 HBL1_DMSO_200M_050219_2,10220 HBL1_DMSO_200M_050219_2,10220,VFIDKQTNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10221 55.421 25.0 2337300.0 25 0 370860.0 + 5809 DPPYSRVI 8 64 473.7532292149006 945.4919054966012 2 473.7534057497978 MULTI CID FTMS 0 0 0 10214 2171976.0 0.852152881918142 -2 0.1836128234863281 7 Unmodified _DPPYSRVI_ ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2 29.081581746732265 0.4323690340403521 4 DPPY[RV]S{I|L} 8 2 + 64.953 0.0 0.0 6.8698 6.8698 83.007 0.0 0.0 0.0 50.97373228030179 3.767507096020992 3.767507096020992 4.203103093438969 0 0.9247425010840048 2.0 0.0 0.0 DPPY[RV]S{I|L};DP{I|L}{M(Oxidation (M))|F}[RV]S{I|L} 6.8698;6.4252 -;- 75 + 1 1.591 53593.5 1.0 5573 4646 10214 HBL1_DMSO_200M_050219_2,10221 HBL1_DMSO_200M_050219_2,10221,DPPYSRVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10222 55.422 27.0 2207400.0 25 0 245790.0 + 4172 DAPHPPLKI 9 91 494.2848575762056 986.5551622192112 2 494.2849914431572 MULTI CID FTMS 0 0 0 10214 1929700.625 0.0522725233093066 4 -0.2989006042480469 8 Unmodified _DAPHPPLKI_ ENSG00000104904|ENST00000602676|OAZ1 41.8396318013385 0.0653578398400075 4 {[DA]|[EG]}PHP[{I|L}P]K{I|L} 9 0 + 51.819 0.0 0.0 5.2525 5.2525 71.847 0.0 0.0 0.0 19.479619346030645 3.590219426416681 3.590219426416681 1.6452935963211246 0 1.4916440611282624 1.6989700043360187 0.0 0.25 + + {[DA]|[EG]}PHP[{I|L}P]K{I|L};{[DA]|[EG]}PH{I|L}{[HG]|PP}K{I|L};{[DA]|[EG]}PHP[{I|L}P]{I|L}K;{[DA]|[EG]}PH{I|L}{[HG]|PP}{I|L}K;[{I|L}T]G[RN]AS[R{I|L}];{[SA]|[TG]}{I|L}[RN]AS[R{I|L}] 5.2525;5.0857;4.8886;4.7218;1.2394;1.0209 +;-;-;-;-;- + 140 + 1 1.591 52463.3 1.0 5574 4646 10214 HBL1_DMSO_200M_050219_2,10222 HBL1_DMSO_200M_050219_2,10222,DAPHPPLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10223 55.423 27.0 2593700.0 25 0 380650.0 + 32636 SAYLVAEKV 9 84 490.2768040928609 978.5390552525218 2 490.2768127322197 MULTI CID FTMS 0 0 0 10214 1862886.5 0.2171810214425406 -2 0.1836128234863281 9 Unmodified _SAYLVAEKV_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P 40.23920728925047 0.0741434193262949 4 {[SA]|[TG]}Y{I|L}VAEKV 9 0 + 81.157 0.0 0.0 8.2936 8.2936 98.059 0.0 0.0 0.0 58.48049429008413 11.20342432483227 11.20342432483227 81.15655669185443 0 1.274227503252014 1.6989700043360187 0.6989700043360187 0.1861818737241735 + + {[SA]|[TG]}Y{I|L}VAEKV 8.2936 + + 176 + 1 1.591 58048.4 1.0 5575 4646 10214 HBL1_DMSO_200M_050219_2,10223 HBL1_DMSO_200M_050219_2,10223,SAYLVAEKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10224 55.424 31.0 3065000.0 25 0 568940.0 + 44658 YPFKPPKV 8 79 325.86056900573425 974.5598776174028 3 325.8602172732353 MULTI CID FTMS 0 0 0 10214 1823873.375 0.0282652167928368 -29 2.5389633178710938 10 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 53.255 0.0 0.0 5.4645 5.4645 88.331 0.0 0.0 0.0 15.630064337353213 6.932176754469275 6.932176754469275 37.67126416391246 0 0.25 1.0457574905606752 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;Y[{I|L}T]KPP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T]K[HS]KV;{[HG]|PP}KK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.4645;1.599;1.2953;0.91056;0.90466;0.42098 +;-;-;-;-;- + 260 + 1 1.591 81449.3 1.0 5576 4646 10214 HBL1_DMSO_200M_050219_2,10224 HBL1_DMSO_200M_050219_2,10224,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10225 55.426 32.0 1468500.0 25 0 151980.0 + 38374 TQTAVITRI 9 60 501.8009992483567 1001.5874455635134 2 501.8011657595634 MULTI CID FTMS 0 0 0 10214 1705636.375 0.3315743204120407 2 -0.1463699340820312 11 Unmodified _TQTAVITRI_ ENSG00000101447|ENST00000619850|FAM83D;nc|ENSG00000101447|Q9H4H8-2|FAM83D 30.43146612281011 0.143988730116972 4 [QT]TAV{I|L}T[R{I|L}] 9 0 + 57.113 0.0 0.0 5.7023 5.7023 88.124 0.0 0.0 0.0 39.63370283961218 3.65279269351241 3.65279269351241 20.2557626122369 0 1.0 1.2218487496163564 0.0 0.0 + + [QT]TAV{I|L}T[R{I|L}];[QT]{I|L}{[SA]|[TG]}{I|L}T[R{I|L}] 5.7023;3.6799 +;- + 85 + 1 1.591 40652.1 1.0 5577 4646 10214 HBL1_DMSO_200M_050219_2,10225 HBL1_DMSO_200M_050219_2,10225,TQTAVITRI False True TQTAVITRI 55.425548 501.801165759563 71745144.0 10214.0 ENSG00000101447|ENST00000619850|FAM83D;;nc|ENSG00000101447|Q9H4H8-2|FAM83D 7.322923183441162 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10226 55.427 40.0 1255800.0 25 0 192340.0 + 2941 AVHEDIVAV 9 61 476.7587468378056 951.5029407424112 2 476.7588073611259 MULTI CID FTMS 0 0 0 10214 1600656.625 0.5844756742881154 1 -0.0291061401367187 12 Unmodified _AVHEDIVAV_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 36.04419817259434 0.0971720506436186 4 {[VA]|[{I|L}G]}HED{I|L}VAV 9 0 + 56.265 0.0 0.0 5.9132 5.9132 87.922 0.0 0.0 0.0 13.979400086720377 10.330145895351848 10.330145895351848 13.979400086720377 0 0.8182503180159344 1.3979400086720375 0.0 0.0 + + {[VA]|[{I|L}G]}HED{I|L}VAV;{[YC]|[HE]}D{I|L}G{I|L}VAV;{[YC]|[HE]}D{I|L}VAVAV;{[YC]|[HE]}{[VA]|[{I|L}G]}D{I|L}VAV 5.9132;4.444;3.9426;3.1062 +;-;-;- + 92 1 1.591 44426.4 1.0 5578 4646 10214 HBL1_DMSO_200M_050219_2,10226 HBL1_DMSO_200M_050219_2,10226,AVHEDIVAV True True AVHEDIVAV 55.426727 476.758807361126 19401434.0 10214.0 nc|ENSG00000083520|Q9Y2L1-2|DIS3;;ENSG00000083520|ENST00000377767|DIS3 7.826714038848877 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10227 55.428 39.0 1395300.0 25 0 268160.0 + 31886 RTLPETLDPA 10 72 556.8011397577762 1111.5877265823524 2 556.8010742068291 MULTI CID FTMS 0 0 0 10214 1392197.875 0.7057359828888418 1 -0.0291061401367187 13 Unmodified _RTLPETLDPA_ ENSG00000065518|ENST00000184266|NDUFB4;nc|ENSG00000065518|O95168-2|NDUFB4 28.49450938151212 0.328477364964909 4 [{I|L}T]R[EP]T{I|L}D[PA] 10 2 + 54.582 0.0 0.0 4.9102 4.9102 82.996 0.0 0.0 0.0 3.1900666554843795 40.60212910631616 3.1900666554843795 12.01645363528069 0 1.0 1.0457574905606752 0.7614393726401688 0.4247425010840047 [{I|L}T]R[EP]T{I|L}D[PA];[DP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[K{I|L}]{I|L}D[PA];[{I|L}T]R{[QG]|[NA]}{[QV]|[N{I|L}]|[RA]|[KV]}A[HC];[{I|L}T]D{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}A[HC] 4.9102;3.8292;0.71506;0.17344 -;-;-;- 97 1 1.591 51298.7 1.0 5579 4646 10214 HBL1_DMSO_200M_050219_2,10227 HBL1_DMSO_200M_050219_2,10227,RTLPETLDPA False True RTLPETLDPA 55.427906 556.801074206829 33639256.0 10214.0 ENSG00000065518|ENST00000184266|NDUFB4;;nc|ENSG00000065518|O95168-2|NDUFB4 7.349063873291016 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10228 55.429 33.0 1955600.0 25 0 214100.0 + 22162 LPPSSALRP 9 64 469.27679076482383 936.5390285964476 2 469.2770568728447 MULTI CID FTMS 0 0 0 10214 1316870.25 0.1476605605195472 22 -1.974918365478516 14 Unmodified _LPPSSALRP_ REV__ENST00000460265.5_1_5:126112743-126113319:+|nuORF 17.11289562659939 0.3734572693229295 4 {I|L}P{I|L}[DN]{I|L}[RP] 8 -1 + 53.633 0.0 0.0 5.7267 5.7267 76.56 0.0 0.0 0.0 42.79544478349929 0.4575749056067479 0.4575749056067479 3.0102999566398125 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P{I|L}[DN]{I|L}[RP];{I|L}PPE[KT][RP];{I|L}P{I|L}[DN][RP]{I|L};{I|L}{I|L}P[DN]{I|L}[RP];{I|L}{I|L}P[DN][RP]{I|L};{I|L}{I|L}YY{I|L}[RP];{I|L}{I|L}YY[RP]{I|L} 5.7267;5.4053;5.0557;2.8162;2.1453;2.1318;1.4609 -;-;-;-;-;-;- 101 + 1 1.591 56597.2 1.0 5580 4646 10214 HBL1_DMSO_200M_050219_2,10228 HBL1_DMSO_200M_050219_2,10228,LPPSSALRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10229 55.431 71.0 607170.0 25 0 46952.0 -1 0 57 881.9127461829552 1761.8109394327105 2 882.4146606326103 MULTI CID FTMS 0 0 0 10214 985063.9375 0.9632442870975936 -2 0.1836128234863281 15 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NE[TP]KW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 14 -1 + 54.223 0.0 0.0 3.0777 3.0777 80.322 0.0 0.0 0.0 35.55085089063013 11.84014959140601 11.84014959140601 54.222988581914535 0 0.5 0.0 0.3807196863200844 0.3054621874040891 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NE[TP]KW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 3.0777 - 115 + 1 1.591 35886.3 1.0 5581 4646 10214 HBL1_DMSO_200M_050219_2,10229 HBL1_DMSO_200M_050219_2,10229, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10230 55.432 61.0 868910.0 25 0 198760.0 + 34416 SLVNLLGTS 9 78 452.2607734748553 902.5069940165106 2 452.2611266970634 MULTI CID FTMS 0 0 0 10214 972367.0 0.4689139558416737 2 -0.1463699340820312 16 Unmodified _SLVNLLGTS_ REV__ENSG00000103657|ENST00000443617|HERC1 26.268140514670165 0.1969607489560049 4 {[TV]|[{I|L}S]}VQGTVVT 9 -1 + 49.734 0.0 0.0 5.5106 5.5106 74.123 0.0 0.0 0.0 10.78131590713106 30.22669403309017 10.78131590713106 2.218487496163561 0 1.0682503180159344 2.0 0.0 0.0 {[TV]|[{I|L}S]}VQGTVVT;{[TV]|[{I|L}S]}VNATVVT;{[TV]|[{I|L}S]}VQV{[SA]|[TG]}VT;{[TV]|[{I|L}S]}VN{I|L}{[SA]|[TG]}VT;{[TV]|[{I|L}S]}V[AG]GTVVT;{[TV]|[{I|L}S]}VGGATVVT;{[TV]|[{I|L}S]}V[AG]V{[SA]|[TG]}VT;{[TV]|[{I|L}S]}VNV[TA]VT;{[TV]|[{I|L}S]}VGG{I|L}{[SA]|[TG]}VT;{[TV]|[{I|L}S]}AAAATVVT 5.5106;5.2648;4.7672;4.5214;4.4903;4.2445;3.7469;3.6592;3.5011;3.357 -;-;-;-;-;-;-;-;-;- 423 1 1.591 46831.1 1.0 5582 4646 10214 HBL1_DMSO_200M_050219_2,10230 HBL1_DMSO_200M_050219_2,10230,SLVNLLGTS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10231 55.434 58.0 807280.0 25 0 102830.0 + 23609 LTPQPGPTV 9 86 455.2555885603596 908.4966241875192 2 455.2561218142509 MULTI CID FTMS 0 0 0 10214 804935.9375 0.0437354893928922 10 -0.9194412231445312 17 Unmodified _LTPQPGPTV_ REV__ENSG00000203485|ENST00000392634|INF2;REV__nc|ENSG00000203485|Q27J81-2|INF2 54.773552608820026 0.0299037012502309 4 {I|L} 1 -1 15.485 0.0 0.0 1.7044 0.0 0.0 777.401544697088 0.0 777.401544697088 0.0 2.522343009212305 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.7044 + + 198 + 1 1.591 42483.0 1.0 5583 4646 10214 HBL1_DMSO_200M_050219_2,10231 HBL1_DMSO_200M_050219_2,10231,LTPQPGPTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10232 55.435 55.0 1340700.0 25 0 192670.0 + 43006 VVYADIKTV 9 90 504.29222380972095 1006.569894686242 2 504.2923461794853 MULTI CID FTMS 0 0 0 10214 740286.375 0.3816158478395431 -2 0.1836128234863281 18 Unmodified _VVYADIKTV_ nc|ENSG00000293488|Q8IZS7|CLECL1P 53.832793166522166 0.0319663582346103 4 VVYAD{I|L}KTV 9 0 + 67.662 0.0 0.0 6.722 6.722 83.219 0.0 0.0 0.0 27.147642715192504 4.771212547196626 4.771212547196626 4.771212547196626 0 0.805462187404089 2.0 1.0044321917401078 0.0 + + VVYAD{I|L}KTV;VVYAD{I|L}KS{I|L};VVY[QT]TVVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}KTVVV;VV[QT]YTVVV;VV{[SA]|[TG]}AYTVVV;VV[QT]TYVVV;VVYA{[NV]|[RG]}{[ET]|[MV]}{I|L};VV{[SA]|[TG]}ATYVVV;VV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AYVVV 6.722;6.248;4.1318;3.7047;3.5857;3.5402;3.2866;3.2839;3.2412;3.1117 +;-;-;-;-;-;-;-;-;- + 848 + 1 1.591 61495.4 1.0 5584 4646 10214 HBL1_DMSO_200M_050219_2,10232 HBL1_DMSO_200M_050219_2,10232,VVYADIKTV True True VVYADIKTV 55.435131 504.292346179485 26674914.0 10214.0 nc|ENSG00000293488|Q8IZS7|CLECL1P 6.869184970855713 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10233 55.437 54.0 997040.0 25 0 101980.0 -1 LMLRHGWR 8 75 542.7934218667502 1083.5722908003004 2 542.7932006716728 MULTI CID FTMS 0 0 0 10214 720031.3125 0.0388711086043935 34 -2.995502471923828 19 Oxidation (M) _LM(Oxidation (M))LRHGWR_ ENSG00000168268|ENST00000422318|NT5DC2;nc|ENSG00000168268|Q9H857-3|NT5DC2;nc|ENSG00000168268|Q9H857-4|NT5DC2;nc|ENSG00000168268|Q9H857|NT5DC2 13.50788311687929 0.7113601687236069 4 YPP 3 -1 50.445 0.0 0.0 4.6555 0.0 0.0 0.0 723.3806028628638 723.3806028628638 34.670306400511706 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YPP 4.6555 - 28 + 1 1.591 49983.8 1.0 5585 4646 10214 HBL1_DMSO_200M_050219_2,10233 HBL1_DMSO_200M_050219_2,10233,LMLRHGWR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10234 55.439 89.0 705270.0 25 0 52812.0 + -1 LHSIQCNYP 9 105 566.2666932787083 1130.5188336242163 2 566.2670776247978 MULTI CID FTMS 0 0 0 10214 627953.5625 0.8656298099186904 -1 0.0986289978027343 20 Carbamidomethyl (C) _LHSIQC(Carbamidomethyl (C))NYP_ REV__ENSG00000182983|ENST00000440367|ZNF662;REV__nc|ENSG00000182983|Q6ZS27-2|ZNF662;REV__nc|ENSG00000182983|Q6ZS27-3|ZNF662 21.74664581756881 0.2544899275067181 4 [HS]{I|L}{I|L}QAQ 7 -1 36.745 0.0 0.0 3.2503 0.0 0.0 0.0 350.0802382036533 350.0802382036533 -0.9503065367659858 0.0 -0.9503065367659858 0.0 0 0.5 0.0 0.6307196863200843 0.2742275032520141 [HS]{I|L}{I|L}QAQ 3.2503 - 459 1 1.591 52132.4 1.0 5586 4646 10214 HBL1_DMSO_200M_050219_2,10234 HBL1_DMSO_200M_050219_2,10234,LHSIQCNYP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10236 55.443 99.0 563040.0 25 0 56101.0 + 44835 YPNTMVSSV 9 107 499.2366354834408 996.4587180336816 2 499.2368652224541 MULTI CID FTMS 0 0 0 10235 390137.65625 0.1955221217239517 -8 0.7493858337402344 1 Unmodified _YPNTMVSSV_ ENSG00000136738|ENST00000377524|STAM 14.838274106304384 0.4350285940865338 4 [{I|L}T][PG]M 5 8 19.488 0.0 0.0 1.9558 0.0 0.0 0.0 494.1738418952628 494.1738418952628 3.743077652164217 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T][PG]M 1.9558 - 314 1 1.591 47131.5 1.0 5587 4647 10235 HBL1_DMSO_200M_050219_2,10236 HBL1_DMSO_200M_050219_2,10236,YPNTMVSSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10237 55.456 740.0 132110.0 25 0 29853.0 -1 0 47 1136.8088094427137 3407.4045989283404 3 1137.477832019329 MULTI CID FTMS 0 0 0 10235 258255.703125 0.5255594375264555 3 -0.2697944641113281 2 4 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.32192 0.0 0.0 1797.6098734418158 1402.691996641928 3200.301870083744 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.32192 - 19 + 1 1.591 86481.0 1.0 5588 4647 10235 HBL1_DMSO_200M_050219_2,10237 HBL1_DMSO_200M_050219_2,10237, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10238 55.459 191.0 620430.0 25 0 111820.0 + 1005 AFYEHAQTYY 10 111 646.7828537576656 1291.5511545821312 2 646.7830078005791 MULTI CID FTMS 0 0 0 10235 551137.8125 0.5668171073227622 -1 0.0291061401367187 3 Unmodified _AFYEHAQTYY_ ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11 82.5293158979368 0.0149949422200525 4 YMA{M(Oxidation (M))|F}AQTYY 9 5 64.932 0.0 0.0 5.0274 0.0 0.0 135.0687733380875 0.0 135.0687733380875 0.0 22.21848749616356 0.0 0.0 0 0.9247425010840048 0.0 0.9247425010840048 0.2614393726401688 YMA{M(Oxidation (M))|F}AQTYY 5.0274 - 12144 1 1.591 90339.9 1.0 5589 4647 10235 HBL1_DMSO_200M_050219_2,10238 HBL1_DMSO_200M_050219_2,10238,AFYEHAQTYY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10239 55.462 122.0 1293000.0 25 0 185530.0 42153 VSALRKMGVN 10 97 358.8734525174744 1073.5985281526232 3 358.8731567263603 MULTI CID FTMS 0 0 0 10235 541485.0 0.0775999386635387 -2 0.1277351379394531 4 Unmodified _VSALRKMGVN_ ENSG00000143811|ENST00000343818|PYCR2 37.97399986684836 0.1789611706409123 4 SV{I|L}AS 5 8 62.519 0.0 0.0 5.8233 0.0 0.0 0.0 613.3183687799436 613.3183687799436 39.143047341054 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 SV{I|L}AS 5.8233 - 258 + 1 1.591 132634.1 1.0 5590 4647 10235 HBL1_DMSO_200M_050219_2,10239 HBL1_DMSO_200M_050219_2,10239,VSALRKMGVN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10240 55.465 166.0 480690.0 25 0 47603.0 + 14572 IHSQIEEFE 9 123 377.84755345299743 1130.5208309591924 3 377.8476440310478 MULTI CID FTMS 0 0 0 10235 493365.3125 1.0 0 0.0 5 Unmodified _IHSQIEEFE_ REV__ENSG00000183914|ENST00000572933|DNAH2;REV__nc|ENSG00000183914|Q9P225-2|DNAH2 26.88365393820708 0.1891292719743517 4 [H{I|L}]S{I|L}QQ 6 -1 38.21 0.0 0.0 3.3798 0.0 0.0 0.0 421.1215749379612 421.1215749379612 22.34612060564024 0.0 0.0 0.0 0 0.0 0.0 0.6382104921644451 0.8807196863200843 [H{I|L}]S{I|L}QQ 3.3798 - 648 1 1.591 71189.0 1.0 5591 4647 10235 HBL1_DMSO_200M_050219_2,10240 HBL1_DMSO_200M_050219_2,10240,IHSQIEEFE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10241 55.468 111.0 514800.0 25 0 41320.0 + 4267 DAPVALVVHM 10 101 534.2808656687488 1066.5471784042977 2 534.2795287966728 MULTI CID FTMS 0 0 0 10235 520756.875 1.0 0 0.0 6 Oxidation (M) _DAPVALVVHM(Oxidation (M))_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 60.38955033654506 0.0355643171799535 4 {[DA]|[EG]}PVA{I|L}VVH{M(Oxidation (M))|F} 10 0 + 76.764 0.0 0.0 7.1974 7.1974 94.515 0.0 0.0 0.0 29.9311534588334 10.511525224473814 10.511525224473814 31.80768504362589 0 1.066901560044258 1.3979400086720375 0.0 0.0 + + {[DA]|[EG]}PVA{I|L}VVH{M(Oxidation (M))|F};{[DA]|[EG]}[WK]{I|L}AV[HQ];{[DA]|[EG]}PVA{I|L}{[SA]|[TG]}[QP]V;[HT]YV{I|L}AV[HQ];{[DA]|[EG]}PVA{I|L}{[SA]|[TG]}[NP]{I|L};{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}AV[HQ];{[DA]|[EG]}PV[WR][QP]V;{[SA]|[TG]}[WR]{I|L}AV[HQ];{[DA]|[EG]}PV[WR][NP]{I|L};[HV][YT]{I|L}AV[HQ] 7.1974;4.2151;4.022;3.9857;3.7859;3.2132;2.793;2.6007;2.5569;2.3728 +;-;-;-;-;-;-;-;-;- + 260 + 1 1.591 56302.4 1.0 5592 4647 10235 HBL1_DMSO_200M_050219_2,10241 HBL1_DMSO_200M_050219_2,10241,DAPVALVVHM True False DAPVALVVHM 55.46751 534.279528796673 3910714.25 10235.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 8.310671170552572 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10242 55.479 686.0 239020.0 25 0 13857.0 + 18216 KVFEHDSVEL 10 170 601.8064256766412 1201.5982984200823 2 601.8058959841728 MULTI CID FTMS 0 0 0 10235 256841.5 0.4701683330644672 2 -0.2318954467773437 7 Unmodified _KVFEHDSVEL_ ENSG00000139684|ENST00000378720|ESD;ENST00000495654.1_1_13:47359843-47367566:-|nuORF 74.19965305603844 0.0188013450058842 4 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}HKDSVE{I|L} 10 3 + 72.29 0.0 0.0 6.0162 6.0162 76.413 0.0 0.0 0.0 2.360371963254707 16.532125137753447 2.360371963254707 2.360371963254707 0 0.6237125054200234 1.3010299956639813 0.8792816040978115 0.535666875892183 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}HKDSVE{I|L};{[QN]|[E{I|L}]|[KN]}AA[WQ]GSVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}HDSKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}HDKSVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{M(Oxidation (M))|F}HDSVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}S[HD]{M(Oxidation (M))|F}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}P[WM]SVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}KN[DG]SVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[MN]PGSVE{I|L};{[QN]|[E{I|L}]|[KN]}VP{[DS]|[MA]|[CV]|TT}DSVE{I|L} 6.0162;5.8197;5.7646;5.6617;5.6378;5.4648;5.3899;5.3899;5.3528;5.2991 -;-;-;-;-;-;-;-;-;- 11416 1 1.591 118543.2 1.0 5593 4647 10235 HBL1_DMSO_200M_050219_2,10242 HBL1_DMSO_200M_050219_2,10242,KVFEHDSVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10243 55.493 800.0 174120.0 25 0 11506.0 -1 0 116 910.415189172831 1818.815825412462 2 911.4197265505792 MULTI CID FTMS 0 0 0 10235 210395.65625 1.0 0 0.0 8 4 NEV{[TV]|[{I|L}S]}S[WC(Carbamidomethyl (C))]{I|L}Q 10 -1 31.534 0.0 0.0 1.7338 0.0 0.0 584.2573986079038 0.0 584.2573986079038 0.0 11.770016216694131 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.5114393726401688 NEV{[TV]|[{I|L}S]}S[WC(Carbamidomethyl (C))]{I|L}Q 1.7338 - 1160 + 1 1.591 95758.8 0.9300000071525574 5594 4647 10235 HBL1_DMSO_200M_050219_2,10243 HBL1_DMSO_200M_050219_2,10243, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10244 55.507 800.0 269200.0 25 0 32736.0 + 8326 ERLPGSVD 8 180 436.7289439044114 871.4433348756228 2 436.7292053103447 MULTI CID FTMS 0 0 0 10235 184852.5625 0.6983324992701209 4 -0.3925971984863281 9 Unmodified _ERLPGSVD_ REV__ENSG00000065054|ENST00000424542|NHERF2;REV__ENST00000564033.1_1_16:2086312-2087982:+|nuORF;REV__nc|ENSG00000065054|Q15599-2|NHERF2;REV__nc|ENSG00000065054|Q15599-3|NHERF2 15.847184025352805 0.6768015514314958 4 [EP]WVKVD 7 -1 + 47.892 0.0 0.0 5.4957 5.4957 86.464 0.0 0.0 0.0 15.316526695878425 31.29788913784175 15.316526695878425 14.823937598229683 0 0.6549471895720985 0.8538719643217619 0.0 0.3807196863200844 [EP]WVKVD;[EP]KVWVD;{[RE]|[WV]}[EP]KVD;[{I|L}P][WD]KVD;{[QV]|[N{I|L}]|[RA]|[KV]}[EP]WVD;[VP][WE]KVD;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}P]WVD;[EP]KV{[SA]|[TG]}{[QN]|[E{I|L}]|[KN]};{[RE]|[WV]}[TP][VG]VD;[{I|L}P][SG]VWVD 5.4957;3.7946;3.3096;2.4167;1.502;1.3482;1.3277;1.19;1.1439;1.0142 -;-;-;-;-;-;-;-;-;- 348 1 1.591 165665.1 0.8299999833106995 5595 4647 10235 HBL1_DMSO_200M_050219_2,10244 HBL1_DMSO_200M_050219_2,10244,ERLPGSVD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10245 55.513 314.0 251070.0 25 0 20959.0 + 28575 PTSSPQDSSSF 11 112 570.2485734316576 1138.4825939301152 2 570.7516967654228 MULTI CID FTMS 0 0 0 10235 164872.328125 0.3885609871671162 7 -0.7103691101074219 10 Unmodified _PTSSPQDSSSF_ ENSG00000136643|ENST00000366960|RPS6KC1;nc|ENSG00000136643|Q96S38-2|RPS6KC1 18.1463463914782 0.6576820063886638 4 {[VA]|[{I|L}G]}DRQ 5 10 22.197 0.0 0.0 1.9497 0.0 0.0 0.0 566.1663457213839 566.1663457213839 7.302046884880941 0.0 0.0 0.0 0 0.0 2.0 0.4916440611282626 0.0 {[VA]|[{I|L}G]}DRQ 1.9497 - 376 1 1.591 62690.5 1.0 5596 4647 10235 HBL1_DMSO_200M_050219_2,10245 HBL1_DMSO_200M_050219_2,10245,PTSSPQDSSSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10246 55.528 800.0 257190.0 25 0 16782.0 -1 VGPVEILG 8 215 413.237951611005 824.46135028881 2 413.2390930056572 MULTI CID FTMS 0 0 0 10235 139027.921875 0.6843822433245559 13 -1.3531494140625 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VGPVEILG_ ENST00000274811.8_1_5:175955559-175955703:-|nuORF 6.354104778181461 0.7857632046190106 4 [EP]W 3 -1 15.062 0.0 0.0 1.8268 0.0 0.0 0.0 409.2666183794691 409.2666183794691 5.45757490560675 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [EP]W 1.8268 - 94 1 1.591 156638.2 0.6899999976158142 5597 4647 10235 HBL1_DMSO_200M_050219_2,10246 HBL1_DMSO_200M_050219_2,10246,VGPVEILG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10247 55.542 800.0 263540.0 25 0 18959.0 33421 SHLPPVSL 8 200 425.2449019682387 848.4752510032774 2 425.2445556521416 MULTI CID FTMS 0 0 0 10235 85547.984375 0.4296695409289657 -1 0.0291061401367187 12 Unmodified _SHLPPVSL_ ENST00000430246.6_1_14:21730764-21730995:-|nuORF 46.92087301778293 0.1537303740847981 4 [HT]PVPVTV 8 5 + 64.343 0.0 0.0 7.5834 7.5834 88.057 0.0 0.0 0.0 6.799482705861351 16.40978057358332 6.799482705861351 6.799482705861351 0 0.8522338482433752 0.3872161432802645 1.4604093769761874 0.0 [HT]PVPVTV;[VP]HTPVTV;[TP]HVPVTV;[HT]PVPS{I|L}V;[HT]PVSP{I|L}V;[VP]HTPS{I|L}V;[TP]HVPS{I|L}V;{[TV]|[{I|L}S]}[HS]PP{I|L}V;[{I|L}P][HS]PVTV;[VP]HTSP{I|L}V 7.5834;6.782;6.6757;6.1906;5.6636;5.3892;5.2829;5.1039;4.9096;4.8622 -;-;-;-;-;-;-;-;-;- 889 1 1.591 160529.9 0.5699999928474426 5598 4647 10235 HBL1_DMSO_200M_050219_2,10247 HBL1_DMSO_200M_050219_2,10247,SHLPPVSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10248 55.556 800.0 320920.0 25 0 52861.0 44468 YNGTYDDTLVY 11 190 441.8621513172793 1322.564624552038 3 441.8619872927666 MULTI CID FTMS 0 0 0 10235 90194.40625 0.5707487933571984 -1 0.0291061401367187 13 Unmodified _YNGTYDDTLVY_ ENSG00000165379|ENST00000298119|LRFN5 13.042465956692816 0.7638483625850725 4 [KG]NAYV 6 9 20.937 0.0 0.0 1.5831 0.0 0.0 0.0 687.2146956939043 687.2146956939043 5.452657723041121 0.0 0.0 0.0 0 0.0 0.0 0.0 1.2828095104469872 [KG]NAYV 1.5831 - 1073 1 1.591 201446.9 0.5799999833106995 5599 4647 10235 HBL1_DMSO_200M_050219_2,10248 HBL1_DMSO_200M_050219_2,10248,YNGTYDDTLVY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10250 55.56 6.0 10845000.0 25 0 1202100.0 + 44990 YPSETFTRV 9 72 550.2746716014435 1098.534790269687 2 550.2751342654228 MULTI CID FTMS 0 0 0 10249 9951750.0 1.0 0 0.0 1 Unmodified _YPSETFTRV_ ENSG00000164109|ENST00000296509|MAD2L1;ENST00000511295.1_1_4:120986776-120987958:-|nuORF;nc|ENSG00000164109|Q13257-2|MAD2L1 34.93206674587334 0.1032771302489716 4 YPSET{M(Oxidation (M))|F} 6 3 79.201 0.0 0.0 7.2097 0.0 0.0 0.0 371.2048128717407 371.2048128717407 51.17570457547339 0.0 0.0 0.0 0 0.805462187404089 2.0 0.8494850021680094 0.0 + YPSET{M(Oxidation (M))|F} 7.2097 + + 181 + 1 1.587 59825.5 1.0 5600 4648 10249 HBL1_DMSO_200M_050219_2,10250 HBL1_DMSO_200M_050219_2,10250,YPSETFTRV True True YPSETFTRV 55.560132 550.275134265423 305385264.0 10249.0 nc|ENSG00000164109|Q13257-2|MAD2L1;;ENST00000511295.1_1_4:120986776-120987958:-|nuORF;;ENSG00000164109|ENST00000296509|MAD2L1 7.034617900848389 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10251 55.561 9.6 3767900.0 25 0 317760.0 + 26697 NYNPAQQAF 9 81 526.7434809142165 1051.472408895233 2 526.7437011599541 MULTI CID FTMS 0 0 0 10249 4013926.75 1.0 0 0.0 2 Unmodified _NYNPAQQAF_ ENSG00000111596|ENST00000229195|CNOT2;nc|ENSG00000111596|Q9NZN8-2|CNOT2;nc|ENSG00000111596|Q9NZN8-3|CNOT2;nc|ENSG00000111596|Q9NZN8-5|CNOT2 42.09456458481378 0.0639583784996157 4 [YN]NPAQ 6 3 43.516 0.0 0.0 4.1386 0.0 0.0 0.0 361.1487143974393 361.1487143974393 24.05198077559512 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.7396518287104438 + [YN]NPAQ 4.1386 + + 304 1 1.587 34997.3 1.0 5601 4648 10249 HBL1_DMSO_200M_050219_2,10251 HBL1_DMSO_200M_050219_2,10251,NYNPAQQAF True True NYNPAQQAF 55.561312 526.7448 132502128.0 10249.0 ENSG00000111596|ENST00000229195|CNOT2;;nc|ENSG00000111596|Q9NZN8-3|CNOT2;;nc|ENSG00000111596|Q9NZN8-2|CNOT2;;nc|ENSG00000111596|Q9NZN8-5|CNOT2 8.288435300191244 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10252 55.562 21.0 2261100.0 25 0 160010.0 + -1 PLCLPTTL 8 92 457.7565494338909 0 457.7563659548759 PEAK CID FTMS 0 0 0 10249 2254963.5 0.5039369172506545 -1 0.1172637939453125 3 Carbamidomethyl (C) _PLC(Carbamidomethyl (C))LPTTL_ REV__ENSG00000072736|ENST00000346183|NFATC3;REV__ENST00000379165.8_1_16:68119584-68225707:+|nuORF;REV__ENST00000553077.5_1_16:68118971-68225707:+|nuORF;REV__ENST00000563288.5_1_16:68120670-68248329:+|nuORF;REV__ENST00000563319.5_1_16:68118971-68248329:+|nuORF;REV__ENST00000569766.5_1_16:68118971-68260371:+|nuORF;REV__nc|ENSG00000072736|Q12968-2|NFATC3;REV__nc|ENSG00000072736|Q12968-3|NFATC3;REV__nc|ENSG00000072736|Q12968-4|NFATC3;REV__nc|ENSG00000072736|Q12968-5|NFATC3;REV__nc|ENSG00000072736|Q12968-6|NFATC3 20.871210003555333 0.4015059659087983 4 NGVNR 5 -1 28.488 0.0 0.0 3.1185 0.0 0.0 232.14138898854367 138.05665002994377 370.1980390184875 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 NGVNR 3.1185 - 187 + 1 1.587 44232.0 1.0 5602 4648 10249 HBL1_DMSO_200M_050219_2,10252 HBL1_DMSO_200M_050219_2,10252,PLCLPTTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10253 55.564 28.0 1848600.0 25 0 173780.0 + 16485 KALDKIAEI 9 97 500.8060837849504 999.5976146367008 2 500.8066284060478 MULTI CID FTMS 0 0 0 10249 1934152.5 0.7975630884411851 -1 0.1172637939453125 4 Unmodified _KALDKIAEI_ ENSG00000176476|ENST00000317058|SGF29;ENST00000569581.1_1_16:28592390-28600520:+|nuORF 32.037481411007896 0.1235546156350648 4 {[QN]|[E{I|L}]|[KN]}[KG]{I|L}K{I|L}S{I|L} 9 6 + 47.656 0.0 0.0 4.7675 4.7675 72.51 0.0 0.0 0.0 3.0265255187674995 34.1609433006314 3.0265255187674995 3.0102999566398125 0 0.2887254899964357 0.8860566476931632 0.3054621874040891 0.0 {[QN]|[E{I|L}]|[KN]}[KG]{I|L}K{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}[KG]{I|L}AEK{I|L};{[QN]|[E{I|L}]|[KN]}[KG]{I|L}EAK{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}A{I|L}K{I|L}S{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}A{I|L}AEK{I|L};{[QN]|[E{I|L}]|[KN]}[KG]K{I|L}{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}[KG]{I|L}K{[CP]|[EA]}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}A{I|L}EAK{I|L};[KA]{I|L}D{I|L}AEK{I|L};{[QN]|[E{I|L}]|[KN]}[KG]{I|L}A{[VA]|[{I|L}G]}S{I|L} 4.7675;4.4663;4.2902;4.2;3.8988;3.8596;3.7951;3.7227;3.6134;3.5452 -;-;-;-;-;-;-;-;-;- 1554 1 1.587 43916.5 1.0 5603 4648 10249 HBL1_DMSO_200M_050219_2,10253 HBL1_DMSO_200M_050219_2,10253,KALDKIAEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10254 55.565 33.0 1230900.0 25 0 81783.0 + 25115 MPYQEIKNV 9 81 561.2864784644923 1120.5584039957846 2 561.2866699099541 MULTI CID FTMS 0 0 0 10249 1686115.75 1.0 0 0.0 5 Unmodified _MPYQEIKNV_ ENSG00000131504|ENST00000389054|DIAPH1;nc|ENSG00000131504|O60610-2|DIAPH1;nc|ENSG00000131504|O60610-3|DIAPH1 51.41523569358685 0.0372669606867193 4 MPYQE{I|L}KNV 9 0 + 73.321 0.0 0.0 6.5432 6.5432 87.755 0.0 0.0 0.0 11.972645579454436 11.972645579454436 11.972645579454436 9.208187539523747 0 1.837180496500464 1.3010299956639813 0.3054621874040891 0.7614393726401688 + + MPYQE{I|L}KNV;MPY[AG]E{I|L}KNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QE{I|L}MK{[NV]|[RG]};MPYQE{I|L}KGGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEM{I|L}K{[NV]|[RG]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]E{I|L}MK{[NV]|[RG]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]EM{I|L}K{[NV]|[RG]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MQE{I|L}K{[NV]|[RG]};[YQ]PE{I|L}MK{[NV]|[RG]};[YQ]PEM{I|L}K{[NV]|[RG]} 6.5432;5.7215;5.4748;5.3817;5.2061;4.653;4.3844;3.9994;3.8015;3.5328 +;-;-;-;-;-;-;-;-;- + 453 + 1 1.587 36771.7 1.0 5604 4648 10249 HBL1_DMSO_200M_050219_2,10254 HBL1_DMSO_200M_050219_2,10254,MPYQEIKNV True True MPYQEIKNV 55.564847 561.286669909954 46173933.0 10249.0 nc|ENSG00000131504|O60610-3|DIAPH1;;nc|ENSG00000131504|O60610-2|DIAPH1;;ENSG00000131504|ENST00000389054|DIAPH1 8.384994983673096 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10255 55.566 50.0 850810.0 25 0 128160.0 + 3907 DALDVANKIG 10 88 508.2744098525481 1014.534266771896 2 508.2744933962822 MULTI CID FTMS 0 0 0 10249 1064014.0 1.0 0 0.0 6 Unmodified _DALDVANKIG_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;ENST00000491601.1_1_17:38595721-38595772:-|nuORF 34.93206674587334 0.2110832994570416 4 {[DA]|[EG]}{I|L}DVA 6 4 48.377 0.0 0.0 4.7684 0.0 0.0 0.0 427.2282724694149 427.2282724694149 17.684465535402296 0.0 0.0 0.0 0 1.6237125054200234 2.0 0.0 0.0 + {[DA]|[EG]}{I|L}DVA 4.7684 + + 344 1 1.587 37790.4 1.0 5605 4648 10249 HBL1_DMSO_200M_050219_2,10255 HBL1_DMSO_200M_050219_2,10255,DALDVANKIG False True DALDVANKIG 55.56617 508.274493396282 10459424.0 10249.0 ENST00000471152.1_2_3:161146917-161147007:-|nuORF;;ENSG00000198242|ENST00000422514|RPL23A;;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;;ENST00000491601.1_1_17:38595721-38595772:-|nuORF;;ENST00000467573.1_1_21:40499576-40499963:+|nuORF 6.235122044881185 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10256 55.568 54.0 814950.0 25 0 103510.0 27549 PLAEADPFY 9 77 511.7444852532993 1021.4744175733986 2 511.7443115115166 MULTI CID FTMS 0 0 0 10249 959504.4375 0.7800835608312465 2 -0.1525306701660156 7 Unmodified _PLAEADPFY_ ENSG00000187550|ENST00000413299|SBK2 8.593279151180031 0.6146971463335029 4 {NN|[MP]|[D{I|L}]|[EV]}[W{I|L}]DD{M(Oxidation (M))|F}V 8 6 {NN|[MP]|[D{I|L}]|[EV]}[W{I|L}]DD{M(Oxidation (M))|F} + + 16.99 -6.0577 -0.6698 1.6633 1.6633 44.395 0.0 0.0 0.0 0.0 -12.1669877129645 -12.1669877129645 0.0 0 0.0 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[W{I|L}]DD{M(Oxidation (M))|F}V 1.6633 - 66 + 1 1.587 39837.9 1.0 5606 4648 10249 HBL1_DMSO_200M_050219_2,10256 HBL1_DMSO_200M_050219_2,10256,PLAEADPFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10257 55.569 60.0 1534900.0 25 0 325140.0 + 42154 SVAPEFRRL 9 72 537.8070852732394 1073.5996176132787 2 537.8074218630791 MULTI CID FTMS 0 0 0 10249 984022.875 0.5150017598101236 -2 0.1463699340820312 8 Unmodified _VSALRKMGVN_ nc|ENSG00000173418|P61599-2|NAA20;ENSG00000173418|ENST00000334982|NAA20 30.63653989081413 0.2803493085145199 4 [VS]A{I|L} 4 6 38.232 0.0 0.0 3.5611 0.0 0.0 0.0 700.3552033468912 700.3552033468912 16.01342204748164 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + [VS]A{I|L} 3.5611 + + 115 + 1 1.587 76529.2 1.0 5607 4648 10249 HBL1_DMSO_200M_050219_2,10257 HBL1_DMSO_200M_050219_2,10257,VSALRKMGVN False False SVAPEFRRL 55.56908 537.807421863079 14008198.0 10249.0 nc|ENSG00000173418|P61599-2|NAA20;;ENSG00000173418|ENST00000334982|NAA20 5.486001968383789 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10258 55.572 138.0 447950.0 25 0 30144.0 43530 WWWWIWWQWW 10 72 874.9041028402406 1747.7936527472812 2 875.4057494997978 MULTI CID FTMS 0 0 0 10249 627799.5625 0.2157513409077182 8 -0.7730712890625 9 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 4 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 8 30.679 0.0 0.0 1.7553 0.0 0.0 862.4313239467272 0.0 862.4313239467272 0.0 9.467809330011434 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3807196863200844 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 1.7553 - 96 1 1.587 46306.8 1.0 5608 4648 10249 HBL1_DMSO_200M_050219_2,10258 HBL1_DMSO_200M_050219_2,10258,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 10259 55.583 644.0 206580.0 25 0 47366.0 -1 0 58 1134.8133542638818 3401.4182333918457 3 1135.148364245892 MULTI CID FTMS 0 0 0 10249 448781.5 1.0 0 0.0 10 4 E 1 -1 6.9897 0.0 0.0 0.20549 0.0 0.0 2745.19012779988 524.1636446588499 3269.35377245873 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20549 - 27 + 1 1.587 108994.8 1.0 5609 4648 10249 HBL1_DMSO_200M_050219_2,10259 HBL1_DMSO_200M_050219_2,10259, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10260 55.586 127.0 623020.0 25 0 58354.0 + 21405 LPGHAGPVAMP 11 88 349.52122403732284 1045.5418427121683 3 349.5209838747978 MULTI CID FTMS 0 0 0 10249 418716.9375 1.0 0 0.0 11 Unmodified _LPGHAGPVAMP_ REV__ENSG00000136931|ENST00000373588|NR5A1 15.847184025352805 0.7055071256943262 4 [{I|L}P]G[HQ]G{I|L}P 8 -1 35.851 0.0 0.0 3.429 0.0 0.0 0.0 243.07980966877668 243.07980966877668 22.663800089887545 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [{I|L}P]G[HQ]G{I|L}P 3.429 - 54 1 1.587 74264.9 1.0 5610 4648 10249 HBL1_DMSO_200M_050219_2,10260 HBL1_DMSO_200M_050219_2,10260,LPGHAGPVAMP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10261 55.588 136.0 659360.0 25 0 158920.0 -1 0 86 375.19983034975 374.19255388315 1 375.2014648318291 MULTI CID FTMS 0 0 0 10249 416397.9375 1.0 0 0.0 12 4 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 3 -1 {[QD]|[EN]|[WG]|[KD]|[RS]} + + 9.6041 -0.50185 -0.20644 2.5666 2.5666 45.188 0.0 0.0 0.0 0.0 0.6077992209375065 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 2.5666 - 8 + 1 1.587 77495.8 1.0 5611 4648 10249 HBL1_DMSO_200M_050219_2,10261 HBL1_DMSO_200M_050219_2,10261, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10262 55.591 99.0 756510.0 25 0 77997.0 + 41661 VPPYIVLSL 9 110 334.20774906805343 999.6014178043604 3 334.2080566287041 MULTI CID FTMS 0 0 0 10249 353670.84375 1.0 0 0.0 13 Unmodified _VPPYIVLSL_ REV__ENST00000503900.1_1_5:75206464-75206944:+|nuORF 8.593279151180031 0.6146971463335029 4 V 1 -1 13.979 0.0 0.0 1.3985 0.0 0.0 882.5218793905892 0.0 882.5218793905892 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3985 + + 58 + 1 1.587 68384.7 1.0 5612 4648 10249 HBL1_DMSO_200M_050219_2,10262 HBL1_DMSO_200M_050219_2,10262,VPPYIVLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10263 55.602 674.0 295820.0 25 0 25684.0 -1 VSGSPLDPCDV 11 168 573.262036255414 1144.509519577628 2 573.2642089724541 MULTI CID FTMS 0 0 0 10249 266876.75 0.7218151825474686 -1 0.1172637939453125 14 Carbamidomethyl (C) _VSGSPLDPC(Carbamidomethyl (C))DV_ ENSG00000188162|ENST00000399397|OTOG;nc|ENSG00000188162|Q6ZRI0|OTOG 21.53697664764585 0.586507868110548 4 {[QD]|[EN]|[WG]|[KD]|[RS]}SV{M(Oxidation (M))|F}[KT]ASY 10 -1 + 46.956 0.0 0.0 4.1027 4.1027 75.221 0.0 0.0 0.0 20.324609153403514 4.585127400284961 4.585127400284961 6.989700043360188 0 0.0 0.0 1.1549471895720984 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}SV{M(Oxidation (M))|F}[KT]ASY;{[QD]|[EN]|[WG]|[KD]|[RS]}SVG[YR]ASY;{[QD]|[EN]|[WG]|[KD]|[RS]}SV{M(Oxidation (M))|F}VEPPQ;{[QD]|[EN]|[WG]|[KD]|[RS]}W{M(Oxidation (M))|F}[KT]ASY;{[QD]|[EN]|[WG]|[KD]|[RS]}SV{M(Oxidation (M))|F}{I|L}HHY;{[QD]|[EN]|[WG]|[KD]|[RS]}SV{M(Oxidation (M))|F}VEPQP;{[QD]|[EN]|[WG]|[KD]|[RS]}SR[YR]ASY;{[QD]|[EN]|[WG]|[KD]|[RS]}SV{M(Oxidation (M))|F}VEPGAP;{[QD]|[EN]|[WG]|[KD]|[RS]}SV{M(Oxidation (M))|F}{I|L}DPPQ;{[QD]|[EN]|[WG]|[KD]|[RS]}DVG[YK]ASY 4.1027;3.492;3.2736;3.1993;3.0878;2.9934;2.9212;2.888;2.8567;2.7686 -;-;-;-;-;-;-;-;-;- 5535 + 1 1.587 150571.1 1.0 5613 4648 10249 HBL1_DMSO_200M_050219_2,10263 HBL1_DMSO_200M_050219_2,10263,VSGSPLDPCDV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10264 55.608 302.0 458740.0 25 0 64532.0 + -1 FVIEMCEHA 9 107 576.246447137936 1150.478341342672 2 576.2461425662041 MULTI CID FTMS 0 0 0 10249 251645.4375 0.4121338693709296 -2 0.1463699340820312 15 Carbamidomethyl (C),Oxidation (M) _FVIEM(Oxidation (M))C(Carbamidomethyl (C))EHA_ REV__nc|ENSG00000183981|A6NCF6|MAGEA13P 16.942295170755138 0.3780752226737986 4 HAED{I|L}VE 7 -1 54.201 0.0 0.0 4.7111 0.0 0.0 339.092577049025 0.0 339.092577049025 0.0 33.249416303414506 0.0 0.0 0 0.4247425010840047 0.0 0.7742275032520141 0.0 HAED{I|L}VE 4.7111 - 254 1 1.587 107450.3 1.0 5614 4648 10249 HBL1_DMSO_200M_050219_2,10264 HBL1_DMSO_200M_050219_2,10264,FVIEMCEHA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10265 55.621 752.0 147730.0 25 0 7048.8 + 26652 NYHWQETAY 9 166 606.259451527316 1210.5043501214318 2 606.2604247927666 MULTI CID FTMS 0 0 0 10249 207761.28125 0.2931379204281344 3 -0.2753334045410156 16 Unmodified _NYHWQETAY_ ENSG00000184979|ENST00000215794|USP18;nc|ENSG00000184979|Q9UMW8-2|USP18 34.40172386719151 0.1061884637610825 4 {NN|[MP]|[D{I|L}]|[EV]}{[DA]|[EG]}WQETAY 10 3 + 60.04 0.0 0.0 4.9599 4.9599 74.102 0.0 0.0 0.0 3.435823463494444 15.026975159433531 3.435823463494444 3.435823463494444 0 0.9247425010840048 1.3979400086720375 1.274227503252014 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[DA]|[EG]}WQETAY;{[MG]|[TS]}[EP]WQETAY;[DP]{[DS]|[MA]|[CV]|TT}WQETAY;{NN|[MP]|[D{I|L}]|[EV]}{[DA]|[EG]}W[AG]ETAY;{[CP]|[EA]}[DV]WQETAY;{[MG]|[TS]}[EP]W[AG]ETAY;[DP]{[DS]|[MA]|[CV]|TT}W[AG]ETAY;[PA][MD]WQETAY;[WH][YN]QETAY;{[CP]|[EA]}[DV]W[AG]ETAY 4.9599;4.6761;4.648;4.2028;4.0138;3.919;3.8909;3.8158;3.5158;3.2567 -;-;-;-;-;-;-;-;-;- 978 1 1.587 80381.4 1.0 5615 4648 10249 HBL1_DMSO_200M_050219_2,10265 HBL1_DMSO_200M_050219_2,10265,NYHWQETAY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10266 55.634 771.0 343090.0 25 0 25620.0 + 8237 EQAGDENEAQ 10 206 545.7171303517505 1089.4197077703009 2 546.2189819216728 MULTI CID FTMS 0 0 0 10249 198801.078125 1.0 0 0.0 17 Unmodified _EQAGDENEAQ_ REV__ENSG00000079805|ENST00000389253|DNM2;REV__ENST00000590806.5_1_19:10922561-10941720:+|nuORF;REV__ENST00000593203.1_1_19:10934344-10943016:+|nuORF;REV__nc|ENSG00000079805|P50570-2|DNM2;REV__nc|ENSG00000079805|P50570-3|DNM2;REV__nc|ENSG00000079805|P50570-5|DNM2;REV__nc|ENSG00000079805|P50570|DNM2 12.240655878213236 0.6421556946785427 4 EAQ 3 -1 20.591 0.0 0.0 1.89 0.0 0.0 743.2578281204363 0.0 743.2578281204363 0.0 1.7168388697975132 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 EAQ 1.89 + + 2905 1 1.587 200558.4 1.0 5616 4648 10249 HBL1_DMSO_200M_050219_2,10266 HBL1_DMSO_200M_050219_2,10266,EQAGDENEAQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10267 55.65 800.0 289020.0 25 0 21006.0 + 13001 HANIAVANI 9 195 461.75852364358747 921.502494353975 2 461.7596313357353 MULTI CID FTMS 0 0 0 10249 180270.28125 1.0 0 0.0 18 Unmodified _HANIAVANI_ ENSG00000042286|ENST00000307864|AIFM2;nc|ENSG00000042286|Q9BRQ8-2|AIFM2 54.773552608820026 0.0299037012502309 4 {[QG]|[NA]}H{I|L}AVAN{I|L} 9 2 + 60.346 0.0 0.0 6.5487 6.5487 80.459 0.0 0.0 0.0 3.3140513976944064 14.973024840566469 3.3140513976944064 3.3140513976944064 0 0.7302046884880937 0.3979400086720376 0.0 0.8252574989159953 {[QG]|[NA]}H{I|L}AVAN{I|L};[HA]N{I|L}AVAN{I|L};{[QG]|[NA]}{I|L}HAVAN{I|L};{[VA]|[{I|L}G]}QHAVAN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AHAVAN{I|L};{[QG]|[NA]}H{I|L}VAAN{I|L};{[QG]|[NA]}H{I|L}AVAGG{I|L};{[QG]|[NA]}H{I|L}G{I|L}AN{I|L};[HA]N{I|L}VAAN{I|L};[HA]N{I|L}AVAGG{I|L} 6.5487;6.189;6.1665;5.9305;5.9205;5.5687;5.5494;5.4635;5.209;5.1898 -;+;-;-;-;-;-;-;-;- + 1398 1 1.587 174923.7 0.8299999833106995 5617 4648 10249 HBL1_DMSO_200M_050219_2,10267 HBL1_DMSO_200M_050219_2,10267,HANIAVANI True True HANIAVANI 55.649553 461.759631335735 1766463.0 10249.0 nc|ENSG00000042286|Q9BRQ8-2|AIFM2;;ENSG00000042286|ENST00000307864|AIFM2 5.591005325317383 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10268 55.657 393.0 298450.0 25 0 18091.0 43202 WAAPTPSL 8 141 421.72388585699866 0 421.7237121462822 PEAK CID FTMS 0 0 0 10249 163453.984375 1.0 0 0.0 19 Unmodified _WAAPTPSL_ nc|ENSG00000168066|Q15637-6|SF1 10.183394434864962 0.5394990767616434 4 EV{I|L} 3 7 16.682 0.0 0.0 1.9826 0.0 0.0 181.0725072683362 316.14217462151976 497.214681889856 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 EV{I|L} 1.9826 - 74 + 1 1.587 96297.4 1.0 5618 4648 10249 HBL1_DMSO_200M_050219_2,10268 HBL1_DMSO_200M_050219_2,10268,WAAPTPSL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10269 55.67 800.0 117990.0 25 0 8251.8 + 36670 TAYPHGWVET 10 155 580.7717871443457 1159.5290213554913 2 580.7715942263603 MULTI CID FTMS 0 0 0 10249 136535.703125 1.0 0 0.0 20 Unmodified _TAYPHGWVET_ ENSG00000104951|ENST00000391826|IL4I1;nc|ENSG00000104951|Q96RQ9-2|IL4I1 60.07390631473393 0.0363923079357811 4 [TA]AAYYSPSET 11 7 + 51.526 0.0 0.0 4.4437 4.4437 70.543 0.0 0.0 0.0 3.562805726034369 15.070623213458042 3.562805726034369 2.730012720637376 0 1.1462566630072957 1.5228787452803376 0.4436726795685343 0.0 [TA]AAYYSPSET;[TA]AAYV[{M(Oxidation (M))|F}T]SET;{[TV]|[{I|L}S]}NYYSPSET;{[TV]|[{I|L}S]}NYV[{M(Oxidation (M))|F}T]SET;[KG]EYYSPSET;{[ET]|[MV]}[HM]KTPSET;{[ET]|[MV]}[HM]KWVET;[TA]AAYVEY[TA]T;[TA]AAYY[TA]VET;[TA]AAYY[{I|L}A]SET 4.4437;4.2083;4.1365;3.901;3.7625;3.6982;3.6772;3.6289;3.6286;3.6055 -;-;-;-;-;-;-;-;-;- 3229 1 1.587 72170.5 0.8199999928474426 5619 4648 10249 HBL1_DMSO_200M_050219_2,10269 HBL1_DMSO_200M_050219_2,10269,TAYPHGWVET True True TAYPHGWVET 55.670422 580.77159422636 1911169.125 10249.0 nc|ENSG00000104951|Q96RQ9-2|IL4I1;;ENSG00000104951|ENST00000391826|IL4I1 8.01168441772461 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10271 55.675 9.0 6239700.0 25 0 1398200.0 + 4591 DAYSSFRSV 9 62 516.2428474414082 1030.4711419496164 2 516.2437621951103 MULTI CID FTMS 0 0 0 10270 6251938.0 0.9028956563890502 1 -0.0378990173339843 1 Unmodified _DAYSSFRSV_ ENSG00000143337|ENST00000606911|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-4|TOR1AIP1 29.84058131909904 0.1515068451768857 4 {[DA]|[EG]}YSS{M(Oxidation (M))|F} 6 3 56.643 0.0 0.0 5.4968 0.0 0.0 0.0 357.18869959049067 357.18869959049067 45.92986265876426 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.3494850021680094 0.0 + {[DA]|[EG]}YSS{M(Oxidation (M))|F} 5.4968 + + 53 + 1 1.587 48556.4 1.0 5620 4649 10270 HBL1_DMSO_200M_050219_2,10271 HBL1_DMSO_200M_050219_2,10271,DAYSSFRSV False True DAYSSFRSV 55.674765 516.24376219511 49594404.0 10270.0 ENSG00000143337|ENST00000606911|TOR1AIP1;;nc|ENSG00000143337|Q5JTV8-4|TOR1AIP1;;nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1 4.661745389302571 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10272 55.678 169.0 335350.0 25 0 28150.0 + 14443 IFQNIKQEY 9 90 591.8118041666739 1181.6090554001478 2 591.8116332888603 MULTI CID FTMS 0 0 0 10270 278025.3125 0.0985408116755268 3 -0.26165771484375 2 Unmodified _IFQNIKQEY_ ENSG00000174574|ENST00000432648|AKIRIN1;nc|ENSG00000174574|Q9H9L7-2|AKIRIN1 70.33199760932243 0.0209706178985989 4 {I|L}{M(Oxidation (M))|F}QN{I|L}K{[ES]|[DT]|[{I|L}C]}{[CT]|[{M(Oxidation (M))|F}G]} 10 3 + 55.169 0.0 0.0 4.669 4.669 73.593 0.0 0.0 0.0 16.532125137753432 3.789850105233299 3.789850105233299 3.789850105233299 0 1.1549471895720984 0.0 1.0994850021680094 0.5 {I|L}{M(Oxidation (M))|F}QN{I|L}K{[ES]|[DT]|[{I|L}C]}{[CT]|[{M(Oxidation (M))|F}G]};{I|L}{M(Oxidation (M))|F}QN{I|L}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}[AG]N{I|L}K{[ES]|[DT]|[{I|L}C]}{[CT]|[{M(Oxidation (M))|F}G]};{I|L}{M(Oxidation (M))|F}QGG{I|L}K{[ES]|[DT]|[{I|L}C]}{[CT]|[{M(Oxidation (M))|F}G]};{I|L}{M(Oxidation (M))|F}[AG]N{I|L}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}QGG{I|L}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}QN[YK]Q{[QN]|[E{I|L}]|[KN]};{I|L}{M(Oxidation (M))|F}Q[YK]NQ{[QN]|[E{I|L}]|[KN]};{I|L}{M(Oxidation (M))|F}QN[YK]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}Q[YK]N{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.669;4.3482;3.8934;3.8934;3.5689;3.5689;3.2002;3.2002;2.9455;2.9455 -;-;-;-;-;-;-;-;-;- 585 + 1 1.587 45939.8 1.0 5621 4649 10270 HBL1_DMSO_200M_050219_2,10272 HBL1_DMSO_200M_050219_2,10272,IFQNIKQEY True True IFQNIKQEY 55.67808 591.81163328886 41546740.0 10270.0 ENSG00000174574|ENST00000432648|AKIRIN1;;nc|ENSG00000174574|Q9H9L7-2|AKIRIN1 7.227078278859456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10273 55.679 11.0 5587200.0 25 0 785220.0 + 22304 LPSEGGVRI 9 75 464.2662769566609 926.518000980122 2 464.2664367556572 MULTI CID FTMS 0 0 0 10270 5071290.0 0.952078156434524 -1 0.1146316528320312 3 Unmodified _LPSEGGVRI_ ENSG00000169217|ENST00000305596|CD2BP2 31.26834338654808 0.1333407332142048 4 {I|L}PSEGR 6 3 73.448 0.0 0.0 7.9274 0.0 0.0 0.0 284.17206751041255 284.17206751041255 48.96205332875283 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.0 {I|L}PSEGR 7.9274 - 177 + 1 1.587 52420.6 1.0 5622 4649 10270 HBL1_DMSO_200M_050219_2,10273 HBL1_DMSO_200M_050219_2,10273,LPSEGGVRI False True LPSEGGVRI 55.679259 464.266436755657 36188512.0 10270.0 ENSG00000169217|ENST00000305596|CD2BP2 4.103264490763347 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10274 55.68 15.0 3094200.0 25 0 246960.0 + 1523 ALIQQATTV 9 69 472.7743170337182 943.5340811342364 2 472.7744933962822 MULTI CID FTMS 0 0 0 10270 2749255.0 0.89310102840839 -1 0.1146316528320312 4 Unmodified _ALIQQATTV_ ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENST00000475906.1_1_14:35732014-35732239:+|nuORF;ENST00000511643.5_1_4:39456165-39456631:-|nuORF;ENST00000561773.1_1_15:66671752-66672088:-|nuORF 24.67388899826682 0.2172451872415813 4 PY[RV]TV 6 7 23.689 0.0 0.0 2.5107 0.0 0.0 210.1199708820864 0.0 210.1199708820864 0.0 -1.3823531182862396 -1.3823531182862396 0.0 0 0.0 0.0 0.3054621874040891 0.0 PY[RV]TV 2.5107 - 266 + 1 1.587 41413.8 1.0 5623 4649 10270 HBL1_DMSO_200M_050219_2,10274 HBL1_DMSO_200M_050219_2,10274,ALIQQATTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10275 55.682 29.0 1710900.0 25 0 138340.0 + 19701 LGLTNQPEL 9 85 492.7714541632418 983.5283553932836 2 492.7714416384697 MULTI CID FTMS 0 0 0 10270 1427516.75 0.0712515605281268 -4 0.3596305847167969 5 Unmodified _LGLTNQPEL_ ENSG00000179626|ENST00000641569|OR6C4 36.04419817259434 0.0971720506436186 4 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L}{I|L}[EP] 9 6 + 49.139 0.0 0.0 4.9962 4.9962 79.799 0.0 0.0 0.0 8.447209416731809 7.147642715192504 7.147642715192504 8.447209416731809 0 0.5 1.0457574905606752 0.0 0.8609243748081783 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L}{I|L}[EP];{[VA]|[{I|L}G]}{[SA]|[TG]}QG{I|L}{I|L}[EP];{[QS]|[NT]}Q{I|L}G{I|L}{I|L}[EP];{[QN]|[E{I|L}]|[KN]}T{I|L}[{I|L}V]A[EP];{[VA]|[{I|L}G]}{[SA]|[TG]}[AG]G{I|L}{I|L}[EP];[{I|L}T]NQG{I|L}{I|L}[EP];[VP]{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A[TP]{I|L}{I|L}[EP];{[QS]|[NT]}[AG]{I|L}G{I|L}{I|L}[EP];{[VA]|[{I|L}G]}{[SA]|[TG]}Q[{I|L}V]A[EP] 4.9962;4.1373;3.1703;3.0664;2.8184;2.6196;2.6109;2.2949;2.234;2.2076 -;-;-;-;-;-;-;-;-;- 299 1 1.587 42960.5 1.0 5624 4649 10270 HBL1_DMSO_200M_050219_2,10275 HBL1_DMSO_200M_050219_2,10275,LGLTNQPEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10276 55.683 68.0 1027500.0 25 0 106530.0 + 22053 LPPPPPPHL 9 66 482.78449894353474 963.5544449538696 2 482.7846252322197 MULTI CID FTMS 0 0 0 10270 765659.8125 0.3966451048319344 9 -0.8947868347167969 6 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 56.04830969593885 0.0282699710924866 4 {I|L}PPPPPPH{I|L} 9 0 + 86.82 0.0 0.0 9.0104 9.0104 97.203 0.0 0.0 0.0 75.71124409813045 12.587418566968154 12.587418566968154 22.21848749616356 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPPPPPH{I|L};{I|L}PPP[YK]H{I|L};{I|L}PP[YK]PH{I|L};{I|L}P[YK]PPH{I|L};{I|L}[YK]PPPH{I|L};{I|L}[YK][YK]H{I|L} 9.0104;6.7046;6.7046;6.7046;4.1881;1.8893 +;-;-;-;-;- + 114 + 1 1.587 58354.4 1.0 5625 4649 10270 HBL1_DMSO_200M_050219_2,10276 HBL1_DMSO_200M_050219_2,10276,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10277 55.685 101.0 507620.0 25 0 80460.0 + 10678 FVTEGSHFVEA 11 65 611.7907405404737 1221.5669281477474 2 611.7906371951103 MULTI CID FTMS 0 0 0 10270 590794.5625 0.5584897689815775 1 -0.0378990173339843 7 Unmodified _FVTEGSHFVEA_ ENSG00000171109|ENST00000471841|MFN1;nc|ENSG00000171109|Q8IWA4-2|MFN1;nc|ENSG00000171109|Q8IWA4-3|MFN1 71.92227651296345 0.0268337859456942 4 {M(Oxidation (M))|F}ETV{M(Oxidation (M))|F}A{NN|[MP]|[D{I|L}]|[EV]} 8 7 49.022 0.0 0.0 4.013 0.0 0.0 281.1134510724625 0.0 281.1134510724625 0.0 28.87131607423747 0.0 0.0 0 0.3807196863200844 0.0 1.6989700043360187 0.0 {M(Oxidation (M))|F}ETV{M(Oxidation (M))|F}A{NN|[MP]|[D{I|L}]|[EV]} 4.013 - 354 1 1.587 44311.2 1.0 5626 4649 10270 HBL1_DMSO_200M_050219_2,10277 HBL1_DMSO_200M_050219_2,10277,FVTEGSHFVEA True True FVTEGSHFVEA 55.685421 611.79063719511 6349716.0 10270.0 nc|ENSG00000171109|Q8IWA4-2|MFN1;;ENSG00000171109|ENST00000471841|MFN1;;nc|ENSG00000171109|Q8IWA4-3|MFN1 7.286768913269043 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10278 55.688 137.0 475830.0 25 0 47118.0 + -1 LMGMIMFCL 9 100 553.7407339628379 1105.4669149924755 2 553.7415649294853 MULTI CID FTMS 0 0 0 10270 450366.6875 0.7680042009731217 2 -0.1607017517089843 8 3 Oxidation (M) _LM(Oxidation (M))GM(Oxidation (M))IM(Oxidation (M))FCL_ REV__ENSG00000109255|ENST00000264218|NMU;REV__ENST00000515325.5_1_4:56465315-56502750:-|nuORF 14.581692164780916 0.4419739649577144 4 YP 2 -1 39.949 0.0 0.0 3.6137 0.0 0.0 0.0 842.3281344049436 842.3281344049436 11.175908674695163 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 YP 3.6137 - 873 + 1 1.587 57528.8 1.0 5627 4649 10270 HBL1_DMSO_200M_050219_2,10278 HBL1_DMSO_200M_050219_2,10278,LMGMIMFCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10279 55.692 197.0 689070.0 25 0 69740.0 + 15651 IQLGPDYLGL 10 131 544.8027950455844 1087.591037157969 2 544.8015014529228 MULTI CID FTMS 0 0 0 10270 345509.71875 0.8948644030428419 -1 0.1146316528320312 9 Unmodified _IQLGPDYLGL_ REV__ENSG00000109586|ENST00000265000|GALNT7 56.17704186161178 0.0466144807663799 4 {I|L}QTSNVAEKV 10 -1 + 90.368 0.0 0.0 8.309 8.309 89.121 0.0 0.0 0.0 19.54242509439325 6.484093130149503 6.484093130149503 6.484093130149503 0 0.6307196863200843 0.6020599913279624 2.0356668758921828 0.3807196863200844 {I|L}QTSNVAEKV;{I|L}QTSNVA[VG]S{I|L};{I|L}QTSGGVAEKV;{I|L}[AG]TSNVAEKV;{I|L}QTSGGVA[VG]S{I|L};{I|L}QTSNVA[VG]TV;{I|L}QTSNV{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{I|L}[AG]TSNVA[VG]S{I|L};{I|L}[AG]TSGGVAEKV;{I|L}[TA]GSNVAEKV 8.309;7.7128;7.4664;6.9128;6.8735;6.7448;6.7177;6.3199;6.0735;5.9646 -;-;-;-;-;-;-;-;-;- 1344 + 1 1.587 105625.8 1.0 5628 4649 10270 HBL1_DMSO_200M_050219_2,10279 HBL1_DMSO_200M_050219_2,10279,IQLGPDYLGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10280 55.694 81.0 616280.0 25 0 30804.0 + 30173 QVTNEFQTV 9 104 533.2638854345932 1064.5132179359864 2 533.2620727419853 MULTI CID FTMS 0 0 0 10270 333088.78125 0.1869185342197719 -3 0.2610015869140625 10 Unmodified _QVTNEFQTV_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 61.357469665136826 0.0253304979873734 4 {[{M(Oxidation (M))|F}H]|[RQ]}{[WT]|[RM]}{M(Oxidation (M))|F}TQV 8 5 + 32.14 0.0 0.0 3.0192 3.0192 73.493 0.0 0.0 0.0 6.44856574903606 3.8835783861202335 3.8835783861202335 8.694702268009728 0 0.242992819099939 1.6989700043360187 0.8807196863200843 0.4247425010840047 {[{M(Oxidation (M))|F}H]|[RQ]}{[WT]|[RM]}{M(Oxidation (M))|F}TQV;[VP]D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TQV;[DP]V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TQV;{[QS]|[NT]}E{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}TQV;{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}{[YD]|[{M(Oxidation (M))|F}M]}TQV;{NN|[MP]|[D{I|L}]|[EV]}YY{I|L}{I|L}{[YC]|[HE]};{[SA]|[TG]}GE{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}TQV;{NN|[MP]|[D{I|L}]|[EV]}YY[HK]QV 3.0192;2.2024;1.1519;1.0725;0.54413;0.50278;0.31232;0.074433 -;-;-;-;-;-;-;- 331 1 1.587 48153.0 1.0 5629 4649 10270 HBL1_DMSO_200M_050219_2,10280 HBL1_DMSO_200M_050219_2,10280,QVTNEFQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10281 55.698 199.0 527870.0 25 0 51336.0 + 34605 SPIVSPRI 8 109 434.7660548721096 867.5175568110193 2 434.7660705447197 MULTI CID FTMS 0 0 0 10270 307735.15625 0.3130813131863887 -4 0.3596305847167969 11 Unmodified _SPIVSPRI_ ENSG00000112029|ENST00000229758|FBXO5;nc|ENSG00000112029|Q9UKT4-2|FBXO5 56.17704186161178 0.1143274477948619 4 SP{I|L}VS[RP]{I|L} 8 0 + 76.279 0.0 0.0 8.7928 8.7928 98.744 0.0 0.0 0.0 63.51469141273565 7.08297602838357 7.08297602838357 76.27890125602455 0 1.274227503252014 2.0 0.0 0.6861818737241735 + + SP{I|L}VS[RP]{I|L} 8.7928 + + 200 + 1 1.587 85760.8 1.0 5630 4649 10270 HBL1_DMSO_200M_050219_2,10281 HBL1_DMSO_200M_050219_2,10281,SPIVSPRI True True SPIVSPRI 55.697617 434.76607054472 32796159.0 10270.0 ENSG00000112029|ENST00000229758|FBXO5;;nc|ENSG00000112029|Q9UKT4-2|FBXO5 3.8023947874705 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10282 55.7 134.0 312780.0 25 0 43124.0 + 21806 LPNHVVNVV 9 68 495.7894638309096 0 495.7902709841728 PEAK CID FTMS 0 0 0 10270 240307.828125 0.1695642616503717 7 -0.6584396362304688 12 Unmodified _LPNHVVNVV_ ENSG00000118217|ENST00000367942|ATF6 32.30548876998284 0.0995446103270859 4 NVVHQ 5 6 24.24 0.0 0.0 2.4496 0.0 0.0 216.14524397901693 193.0982454889281 409.2434894679451 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 NVVHQ 2.4496 - 77 + 1 1.587 38561.5 1.0 5631 4649 10270 HBL1_DMSO_200M_050219_2,10282 HBL1_DMSO_200M_050219_2,10282,LPNHVVNVV True True LPNHVVNVV 55.700332 495.790270984173 2654444.25 10270.0 ENSG00000118217|ENST00000367942|ATF6 4.888726552327474 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10283 55.705 255.0 355770.0 25 0 40485.0 + 4329 DARYVTMV 8 126 477.7388241940325 0 477.7386047244072 PEAK CID FTMS 0 0 0 10270 229068.65625 0.740982071040783 -2 0.2318954467773437 13 Unmodified _DARYVTMV_ ENSG00000151461|ENST00000357604|UPF2 21.53697664764585 0.3889228042964073 4 MTD 3 7 19.922 0.0 0.0 2.0894 0.0 0.0 117.07626791755884 486.2520235651001 603.3282914826589 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 MTD 2.0894 - 326 + 1 1.587 72821.4 1.0 5632 4649 10270 HBL1_DMSO_200M_050219_2,10283 HBL1_DMSO_200M_050219_2,10283,DARYVTMV False True DARYVTMV 55.705061 477.738604724407 11318947.0 10270.0 ENSG00000151461|ENST00000357604|UPF2 2.147967298825582 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10284 55.708 165.0 359770.0 25 0 26408.0 + 45031 YPVRMKCCL 9 100 556.7758269804698 1111.5371010277397 2 556.7771484255791 MULTI CID FTMS 0 0 0 10270 179040.4375 1.0 0 0.0 14 Unmodified _YPVRMKCCL_ REV__ENST00000401715.2_1_6:10118966-10119482:+|nuORF 23.1484247019978 0.2366544122328345 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM}{I|L}VPYV 9 -1 + 54.403 0.0 0.0 4.8944 4.8944 70.839 0.0 0.0 0.0 10.377786500300132 10.377786500300132 10.377786500300132 1.817496819840656 0 0.3494850021680094 1.6989700043360187 0.805462187404089 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM}{I|L}VPYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VE[{M(Oxidation (M))|F}V]PYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VEE[{I|L}T]YV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM}{I|L}PVYV;YPV[{M(Oxidation (M))|F}V]E{I|L}{M(Oxidation (M))|F}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM}{I|L}PYVV;[YT]{[QN]|[E{I|L}]|[KN]}EVPYV;[YT]{I|L}EEPVYV;YPV[{M(Oxidation (M))|F}V]EYPV;[YT]EE{I|L}VPYV 4.8944;4.7309;4.5724;4.5364;3.9607;3.8834;3.71;3.6383;3.6228;3.5488 -;-;-;-;-;-;-;-;-;- 826 1 1.587 52019.6 1.0 5633 4649 10270 HBL1_DMSO_200M_050219_2,10284 HBL1_DMSO_200M_050219_2,10284,YPVRMKCCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10286 55.713 7.7 6133800.0 25 0 890690.0 + 41190 VPDTSRIYV 9 62 525.2850203801842 1048.5554878271682 2 525.2853881716728 MULTI CID FTMS 0 0 0 10285 6236488.0 0.5481290101209604 3 -0.3212051391601562 1 Unmodified _VPDTSRIYV_ ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT 32.78568957990786 0.1150597335874693 4 VPDT 4 5 57.907 0.0 0.0 5.5226 0.0 0.0 0.0 633.3364837896893 633.3364837896893 27.56235345249905 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.8494850021680094 0.0 + VPDT 5.5226 + + 33 + 1 1.587 47590.0 1.0 5634 4650 10285 HBL1_DMSO_200M_050219_2,10286 HBL1_DMSO_200M_050219_2,10286,VPDTSRIYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10287 55.714 7.7 7403400.0 25 0 1007100.0 + 32637 SAYLVAEKV 9 82 490.2768040928609 978.5390552525218 2 490.2769348025322 MULTI CID FTMS 0 0 0 10285 6105017.5 0.711741663582073 2 -0.2237586975097656 2 Unmodified _SAYLVAEKV_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000224411|Q14568|HSP90AA2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P 55.50274090549119 0.0285720310785888 4 {[SA]|[TG]}Y{I|L}VAEKV 9 0 + 84.07 0.0 0.0 8.5913 8.5913 97.663 0.0 0.0 0.0 63.91924897324755 11.962724883926654 11.962724883926654 37.81840835879776 0 1.2059771852360797 1.6989700043360187 0.9436726795685342 0.0 + + {[SA]|[TG]}Y{I|L}VAEKV;{[SA]|[TG]}Y{I|L}[KT][TP]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RK]{I|L}[R{M(Oxidation (M))|F}] 8.5913;4.7266;2.5696 +;-;- + 220 + 1 1.587 52691.1 1.0 5635 4650 10285 HBL1_DMSO_200M_050219_2,10287 HBL1_DMSO_200M_050219_2,10287,SAYLVAEKV True True SAYLVAEKV 55.713844 490.276934802532 124522568.0 10285.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENSG00000080824|ENST00000216281|HSP90AA1;;nc|ENSG00000282100|Q58FF6|HSP90AB4P 7.300987720489502 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10288 55.715 22.0 3243500.0 25 0 402570.0 + 20148 LKPGILPVPK 10 71 531.3577281216423 1060.7009033100844 2 531.3578979372978 MULTI CID FTMS 0 0 0 10285 3088457.5 0.5418917854321131 2 -0.2237586975097656 3 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 14.95716135407024 0.5965753712453801 4 K{I|L}AP{I|L}VKD{I|L} 9 -1 82.93 0.0 0.0 7.8184 0.0 0.0 0.0 80.05132471256093 80.05132471256093 57.34562568094545 0.0 0.0 0.0 0 2.3807196863200843 0.0 0.805462187404089 0.0 K{I|L}AP{I|L}VKD{I|L} 7.8184 - 190 + 1 1.587 60835.4 1.0 5636 4650 10285 HBL1_DMSO_200M_050219_2,10288 HBL1_DMSO_200M_050219_2,10288,LKPGILPVPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10289 55.716 18.0 4306200.0 25 0 792480.0 + 44659 YPFKPPKV 8 77 325.86056900573425 974.5598776174028 3 325.8602172732353 MULTI CID FTMS 0 0 0 10285 2625550.75 0.0406890972622183 -25 2.1234588623046875 4 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 54.851 0.0 0.0 5.6283 5.6283 89.075 0.0 0.0 0.0 17.896073493757278 8.086477380337435 8.086477380337435 39.2678054240104 0 0.2396518287104437 1.2218487496163564 0.0 0.2134679910804404 + + YP{M(Oxidation (M))|F}KPPKV;Y[{I|L}T]KPP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]K[HS]KV;[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.6283;1.599;1.2847;1.0791;0.72987 +;-;-;-;- + 227 + 1 1.587 67070.7 1.0 5637 4650 10285 HBL1_DMSO_200M_050219_2,10289 HBL1_DMSO_200M_050219_2,10289,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10290 55.717 20.0 2792100.0 25 0 725690.0 -1 HVAVKCFEL 9 77 368.19447723393614 1101.5616023020084 3 368.1942016482353 MULTI CID FTMS 0 0 0 10285 2416458.25 0.2505670908735906 29 -2.5837860107421875 5 Carbamidomethyl (C) _HVAVKC(Carbamidomethyl (C))FEL_ ENST00000585812.5_1_17:59456443-59469483:+|nuORF;ENST00000587294.5_1_17:59445549-59469483:+|nuORF;nc|ENSG00000141376|Q9H6U6-3|BCAS3;nc|ENSG00000141376|Q9H6U6-8|BCAS3 13.042465956692816 0.4836390050082244 4 E{I|L}{M(Oxidation (M))|F} 3 -1 24.693 0.0 0.0 2.2416 0.0 0.0 694.355272361525 0.0 694.355272361525 0.0 10.088643834802156 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}{M(Oxidation (M))|F} 2.2416 - 101 1 1.587 53601.5 1.0 5638 4650 10285 HBL1_DMSO_200M_050219_2,10290 HBL1_DMSO_200M_050219_2,10290,HVAVKCFEL False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 10291 55.719 75.0 944880.0 25 0 82834.0 + 18035 KSLSVVTEV 9 120 481.28210115354767 960.5496493738954 2 481.2825500369072 MULTI CID FTMS 0 0 0 10285 868760.375 0.5429877909676661 -1 0.0378990173339843 6 Unmodified _KSLSVVTEV_ ENSG00000053900|ENST00000315368|ANAPC4;nc|ENSG00000053900|Q9UJX5-2|ANAPC4;nc|ENSG00000053900|Q9UJX5-3|ANAPC4 51.629811660486645 0.0367964933207742 4 {[TV]|[{I|L}S]}K[VS]VTEV 9 2 + 51.48 0.0 0.0 5.3595 5.3595 84.649 0.0 0.0 0.0 6.9110035332145685 24.93423966511373 6.9110035332145685 11.237125054200234 0 0.7742275032520141 0.6575773191777937 1.6861818737241734 0.0 {[TV]|[{I|L}S]}K[VS]VTEV;{[TV]|[{I|L}S]}K[TA]{I|L}TEV;{I|L}{I|L}[RN]VT{M(Oxidation (M))|F}V;{I|L}{I|L}HH[VP]{M(Oxidation (M))|F}V 5.3595;4.1896;3.5803;2.024 -;-;-;- 257 1 1.587 56807.4 1.0 5639 4650 10285 HBL1_DMSO_200M_050219_2,10291 HBL1_DMSO_200M_050219_2,10291,KSLSVVTEV True True KSLSVVTEV 55.719117 481.282550036907 11884022.0 10285.0 ENSG00000053900|ENST00000315368|ANAPC4;;nc|ENSG00000053900|Q9UJX5-3|ANAPC4;;nc|ENSG00000053900|Q9UJX5-2|ANAPC4 3.3560724208752317 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10292 55.721 90.0 817820.0 25 0 117140.0 + 43007 VVYADIKTV 9 87 504.29222380972095 1006.569894686242 2 504.2923461794853 MULTI CID FTMS 0 0 0 10285 739558.25 0.3812405011512994 2 -0.2237586975097656 7 Unmodified _VVYADIKTV_ nc|ENSG00000293488|Q8IZS7|CLECL1P 43.77239144664712 0.0547478964384323 4 VVYAD{I|L}KTV 9 0 + 68.008 0.0 0.0 6.7564 6.7564 82.075 0.0 0.0 0.0 27.147642715192504 3.853508813640176 3.853508813640176 3.853508813640176 0 0.7742275032520141 2.0 1.0189301784845295 0.4247425010840047 + + VVYAD{I|L}KTV;VVYAD{I|L}KS{I|L};VVYAA[R{I|L}]C{I|L} 6.7564;6.3736;3.8002 +;-;- + 370 + 1 1.587 59831.8 1.0 5640 4650 10285 HBL1_DMSO_200M_050219_2,10292 HBL1_DMSO_200M_050219_2,10292,VVYADIKTV True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10293 55.723 70.0 975080.0 25 0 116820.0 22340 LPSPGPRLT 9 73 469.27679076482383 936.5390285964476 2 469.2770873904228 MULTI CID FTMS 0 0 0 10285 724806.5 0.0812724974675456 26 -2.221595764160156 8 Unmodified _LPSPGPRLT_ ENST00000562955.2_2_1:43916973-43917366:+|nuORF 14.838274106304384 0.4350285940865338 4 {I|L}P{I|L} 3 6 50.445 0.0 0.0 5.3864 0.0 0.0 0.0 610.2960299127561 610.2960299127561 40.44531259372398 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P{I|L} 5.3864 - 42 + 1 1.587 56367.8 1.0 5641 4650 10285 HBL1_DMSO_200M_050219_2,10293 HBL1_DMSO_200M_050219_2,10293,LPSPGPRLT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10294 55.725 113.0 471030.0 25 0 36485.0 -1 0 55 881.9127461829552 1761.8109394327105 2 882.4145385622978 MULTI CID FTMS 0 0 0 10285 663417.625 0.6487225985177268 2 -0.2237586975097656 9 4 QAEN{I|L}[DP]{[QN]|[E{I|L}]|[KN]} 9 -1 41.973 0.0 0.0 2.3824 0.0 0.0 734.3708038749156 0.0 734.3708038749156 0.0 23.032731160692137 0.0 0.0 0 0.4247425010840047 0.0 0.7614393726401688 0.4247425010840047 QAEN{I|L}[DP]{[QN]|[E{I|L}]|[KN]} 2.3824 - 83 1 1.587 40947.9 1.0 5642 4650 10285 HBL1_DMSO_200M_050219_2,10294 HBL1_DMSO_200M_050219_2,10294, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10295 55.727 86.0 804040.0 25 0 80001.0 -1 MLPPPTARVS 10 90 542.7934218667502 1083.5722908003004 2 542.7929565310478 MULTI CID FTMS 0 0 0 10285 501119.875 0.0270531083117931 38 -3.594860076904297 10 Oxidation (M) _M(Oxidation (M))LPPPTARVS_ ENST00000511502.5_1_1:1563180-1563657:+|nuORF 18.1463463914782 0.5430639438673815 4 YPP 3 -1 54.693 0.0 0.0 5.0474 0.0 0.0 0.0 723.3789427099607 723.3789427099607 38.529455342775165 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 YPP 5.0474 - 207 + 1 1.587 62335.0 1.0 5643 4650 10285 HBL1_DMSO_200M_050219_2,10295 HBL1_DMSO_200M_050219_2,10295,MLPPPTARVS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10296 55.737 550.0 288100.0 25 0 47512.0 + 1006 AFYEHAQTYY 10 153 646.7828537576656 1291.5511545821312 2 646.7829467654228 MULTI CID FTMS 0 0 0 10285 389547.25 0.4006294621829034 2 -0.2237586975097656 11 Unmodified _AFYEHAQTYY_ ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11 82.5293158979368 0.0149949422200525 4 A{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}AQTYY 9 2 65.545 0.0 0.0 5.0749 0.0 0.0 119.07408339668125 0.0 119.07408339668125 0.0 23.540397206915173 0.0 0.0 0 0.9247425010840048 0.0 1.0 0.25 A{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}AQTYY 5.0749 - 22088 1 1.587 115918.7 1.0 5644 4650 10285 HBL1_DMSO_200M_050219_2,10296 HBL1_DMSO_200M_050219_2,10296,AFYEHAQTYY True True AFYEHAQTYY 55.736732 646.782946765423 14525993.0 10285.0 ENSG00000168538|ENST00000334690|TRAPPC11;;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;;ENST00000509857.5_1_4:184585182-184595983:+|nuORF 8.188583850860596 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10297 55.74 195.0 540630.0 25 0 52721.0 + 22087 LPPPTPSQI 9 148 475.2721326058588 948.5297122785176 2 475.2732421755791 MULTI CID FTMS 0 0 0 10285 206342.9375 0.6251428068293546 4 -0.4405746459960937 12 Unmodified _LPPPTPSQI_ ENSG00000083223|ENST00000375963|TUT7;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7 39.957323273325 0.0756908302845263 4 [{I|L}P]P[DG]P{I|L}Q{I|L} 9 3 + 24.323 0.0 0.0 2.5643 2.5643 63.076 0.0 0.0 0.0 1.4967468446879266 1.4215905896025376 1.4215905896025376 1.4215905896025376 0 0.6237125054200234 1.5228787452803376 1.1307196863200843 0.0 [{I|L}P]P[DG]P{I|L}Q{I|L};[{I|L}P]P[DG]P{I|L}[{I|L}A]G;[{I|L}P][HN]A{[RE]|[WV]}{I|L};[{I|L}P]P[TP][PS]Q{I|L};{[HG]|PP}TPSP{I|L}Q{I|L};{[HG]|PP}TPSP{I|L}[{I|L}A]G;[AG]{I|L}[HT]P{I|L}Q{I|L};[{I|L}P][HN]A[W{I|L}]V;[AG]{I|L}[HT]P{I|L}[{I|L}A]G;{[HG]|PP}TP{I|L}[PS]Q{I|L} 2.5643;2.4144;2.4065;2.1025;1.5894;1.4395;1.4118;1.4005;1.2619;1.1276 -;-;-;+;-;-;-;-;-;- + 920 1 1.587 81927.1 1.0 5645 4650 10285 HBL1_DMSO_200M_050219_2,10297 HBL1_DMSO_200M_050219_2,10297,LPPPTPSQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10298 55.754 800.0 216780.0 25 0 14031.0 + + -1 QPYQPLREV 9 168 565.3036711882023 1128.5927894432043 2 565.3041869997978 MULTI CID FTMS 0 0 0 10285 175375.0 1.0 0 0.0 13 Carbamidomethyl (C) _NKQELKPC(Carbamidomethyl (C))L_ ENSG00000123352|ENST00000552918|SPATS2;ENST00000547003.1_1_12:49916566-49919899:+|nuORF;ENST00000549412.5_2_12:49906680-49920035:+|nuORF 32.30548876998284 0.1201446275138228 4 [QP]YQ[{I|L}P]{[RE]|[WV]}V 9 -1 + 34.542 0.0 0.0 3.0606 3.0606 69.618 0.0 0.0 0.0 16.838736399684826 0.7167444002308869 0.7167444002308869 4.678153166285991 0 1.0 0.431798275933005 0.3252574989159953 0.7059771852360797 [QP]YQ[{I|L}P]{[RE]|[WV]}V;[QP]YQ[{I|L}P][RD]{I|L};[QP]YQV[W{I|L}]PV;NK[WP]RRC(Carbamidomethyl (C)){I|L};[YQ]RRD[RH]V;[QP]Y[AG]V[W{I|L}]PV;{[TV]|[{I|L}S]}H{I|L}QAQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V;[QP]V[EP]Q{I|L}RY;{[TV]|[{I|L}S]}H{I|L}MH[RH]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HQ]RRC(Carbamidomethyl (C)){I|L} 3.0606;2.6461;2.3153;1.0188;0.8971;0.87388;0.76179;0.34177;0.29326;0.1716 -;-;-;-;-;-;-;-;-;- 483 + 1 1.587 131757.8 0.9900000095367432 5646 4650 10285 HBL1_DMSO_200M_050219_2,10298 HBL1_DMSO_200M_050219_2,10298,NKQELKPCL False False QPYQPLREV 55.7543 565.304186999798 1170776.375 10285.0 ENSG00000123352|ENST00000552918|SPATS2;;ENST00000547003.1_1_12:49916566-49919899:+|nuORF;;ENST00000549412.5_2_12:49906680-49920035:+|nuORF 3.679674863815308 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10299 55.768 800.0 215060.0 25 0 29231.0 + 6064 DSILVKTV 8 170 437.7656124455495 873.516671957899 2 437.7662536501884 MULTI CID FTMS 0 0 0 10285 131480.921875 1.0 0 0.0 14 Unmodified _DSILVKTV_ ENSG00000156515|ENST00000359426|HK1;nc|ENSG00000156515|P19367-2|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156515|P19367-4|HK1 68.08070601005525 0.1147890174299629 4 {[DS]|[MA]|[CV]|TT}{I|L}{I|L}VKTV 8 0 + 49.607 0.0 0.0 5.679 5.679 79.533 0.0 0.0 0.0 9.57390399477528 5.006023505691843 5.006023505691843 5.006023505691843 0 0.2887254899964357 0.4089353929735008 1.3737125054200234 0.0 + + {[DS]|[MA]|[CV]|TT}{I|L}{I|L}VKTV;{[DS]|[MA]|[CV]|TT}{I|L}{I|L}VKS{I|L};{[DS]|[MA]|[CV]|TT}{I|L}{I|L}VV[KT];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SW{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}KVW{[QN]|[E{I|L}]|[KN]};{[QV]|[N{I|L}]|[RA]|[KV]}TVW{[QN]|[E{I|L}]|[KN]};[{I|L}V]KSW{[QN]|[E{I|L}]|[KN]};[KT]VVW{[QN]|[E{I|L}]|[KN]} 5.679;5.1059;4.345;1.7394;1.7073;1.5964;1.253;0.40421 +;-;-;-;-;-;-;- + 433 + 1 1.587 133454.6 0.7300000190734863 5647 4650 10285 HBL1_DMSO_200M_050219_2,10299 HBL1_DMSO_200M_050219_2,10299,DSILVKTV True True DSILVKTV 55.768115 437.766253650188 1064420.875 10285.0 nc|ENSG00000156515|P19367-4|HK1;;nc|ENSG00000156515|P19367-3|HK1;;ENSG00000156515|ENST00000359426|HK1;;nc|ENSG00000156515|P19367-2|HK1 6.121838251749675 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10300 55.782 800.0 245270.0 25 0 12487.0 -1 LPIWSICLGC 10 175 406.8702124882751 1217.5888080650252 3 406.8710204958916 MULTI CID FTMS 0 0 0 10285 130948.8203125 0.1223430281947397 4 -0.4405746459960937 15 2 Carbamidomethyl (C) _LPIWSIC(Carbamidomethyl (C))LGC(Carbamidomethyl (C))_ ENSG00000124564|ENST00000397060|SLC17A3;nc|ENSG00000124564|O00476|SLC17A3 12.174745833636583 0.6432616012102976 4 {I|L}PE{I|L}G 5 -1 44.553 0.0 0.0 3.6591 0.0 0.0 0.0 705.2837008111936 705.2837008111936 16.406337251348184 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}PE{I|L}G 3.6591 - 1841 + 1 1.587 154758.2 0.6800000071525574 5648 4650 10285 HBL1_DMSO_200M_050219_2,10300 HBL1_DMSO_200M_050219_2,10300,LPIWSICLGC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10301 55.796 800.0 97344.0 25 0 20487.0 -1 0 48 1151.1470159953058 3450.419218586117 3 1151.814868152142 MULTI CID FTMS 0 0 0 10285 131504.390625 0.7484809217106736 1 -0.122802734375 16 4 E 1 -1 6.9897 0.0 0.0 0.20258 0.0 0.0 2794.1895648507143 524.1627291315061 3318.3522939822205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20258 - 9 + 1 1.587 68721.8 0.6700000166893005 5649 4650 10285 HBL1_DMSO_200M_050219_2,10301 HBL1_DMSO_200M_050219_2,10301, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10302 55.803 338.0 295350.0 25 0 20910.0 24062 LYCASLWTSL 10 133 578.7881197560127 1155.5616865788254 2 578.7905761599541 MULTI CID FTMS 0 0 0 10285 109755.578125 0.8034589299395172 -1 0.0378990173339843 17 Unmodified _LYCASLWTSL_ ENSG00000014919|ENST00000016171|COX15;nc|ENSG00000014919|Q7KZN9-2|COX15 21.74664581756881 0.480091245866545 4 {I|L}YKSVD[EC]S{I|L} 10 6 + 47.788 0.0 0.0 4.1354 4.1354 74.861 0.0 0.0 0.0 20.62180066222909 8.661764699893077 8.661764699893077 6.483684931705959 0 0.2742275032520141 2.0 0.8882104921644451 0.0 {I|L}YKSVD[EC]S{I|L};{I|L}YKSVD[CS]E{I|L};{I|L}YKSVD{[ES]|[DT]|[{I|L}C]}C{I|L};{I|L}YKWD{[ES]|[DT]|[{I|L}C]}C{I|L};[YK]{I|L}SVD[EC]S{I|L};[Y{I|L}]{[C(Carbamidomethyl (C))E]|[WC]}V[TP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[YK]{I|L}SVD[CS]E{I|L};[RH][TP]VD[EC]S{I|L};[YK]{I|L}SVD{[ES]|[DT]|[{I|L}C]}C{I|L};[RH][TP]VD[CS]E{I|L} 4.1354;3.5744;3.0019;2.4156;1.823;1.8031;1.2619;1.0657;0.68943;0.50466 -;-;-;-;-;-;-;-;-;- 1180 + 1 1.587 77038.7 1.0 5650 4650 10285 HBL1_DMSO_200M_050219_2,10302 HBL1_DMSO_200M_050219_2,10302,LYCASLWTSL False True AAMPDHTDVSL 55.803398 578.790576159954 565951.625 10285.0 nc|ENSG00000138134|Q96FJ0-2|STAMBPL1;;ENSG00000138134|ENST00000371926|STAMBPL1 2.0134183963139853 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10303 55.817 800.0 165590.0 25 0 26359.0 -1 0 65 1102.7976283903058 3305.3710557711174 3 1103.468066394329 MULTI CID FTMS 0 0 0 10285 113527.609375 0.3276683435441719 -3 0.2697944641113281 18 4 E 1 -1 6.9897 0.0 0.0 0.21146 0.0 0.0 2649.1448897989985 524.1623629205686 3173.307252719568 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21146 - 42 + 1 1.587 105806.7 0.6299999952316284 5651 4650 10285 HBL1_DMSO_200M_050219_2,10303 HBL1_DMSO_200M_050219_2,10303, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10304 55.831 800.0 191330.0 25 0 12775.0 + 31408 RPGAGKGR 8 183 399.7373698285371 0 399.7378112673759 PEAK CID FTMS 0 0 0 10285 112900.765625 0.6547357791702538 -7 0.5735626220703125 19 Unmodified _RPGAGKGR_ REV__ENST00000309117.10_1_21:38639566-38639725:-|nuORF 0.6903765706972694 0.5983587967854751 4 {I|L} 1 -1 2.7642 0.0 0.0 0.34663 0.0 0.0 399.23665874711486 282.118736252976 681.3553950000909 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.34663 - 7 + 1 1.587 121076.5 0.5899999737739563 5652 4650 10285 HBL1_DMSO_200M_050219_2,10304 HBL1_DMSO_200M_050219_2,10304,RPGAGKGR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10306 55.835 12.0 6876000.0 25 0 1039900.0 35823 SVLARMLRE 9 72 358.8734525174744 1073.5985281526232 3 358.8733093142509 MULTI CID FTMS 0 0 0 10305 4102454.5 0.5879206581344973 2 -0.1984024047851562 1 Unmodified _SVLARMLRE_ ENSG00000173638|ENST00000311124|SLC19A1;nc|ENSG00000173638|P41440-2|SLC19A1;nc|ENSG00000173638|P41440-3|SLC19A1 27.628801355627647 0.1796483985696185 4 SV{I|L}A 4 5 56.186 0.0 0.0 5.2334 0.0 0.0 0.0 700.3543020347324 700.3543020347324 38.48258770979733 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + SV{I|L}A 5.2334 + + 33 + 1 1.592 74914.9 1.0 5653 4651 10305 HBL1_DMSO_200M_050219_2,10306 HBL1_DMSO_200M_050219_2,10306,SVLARMLRE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10307 55.837 29.0 1514700.0 25 0 164560.0 + 44991 YPSETFTRV 9 61 550.2746716014435 1098.534790269687 2 550.2750121951103 MULTI CID FTMS 0 0 0 10305 1562865.625 0.1570443012535483 3 -0.3177719116210937 2 Unmodified _YPSETFTRV_ ENSG00000164109|ENST00000296509|MAD2L1;ENST00000511295.1_1_4:120986776-120987958:-|nuORF;nc|ENSG00000164109|Q13257-2|MAD2L1 34.93206674587334 0.1032771302489716 4 YPSET{M(Oxidation (M))|F} 6 3 79.641 0.0 0.0 7.2498 0.0 0.0 0.0 371.2052096002563 371.2052096002563 68.6721376912844 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.8494850021680094 0.0 + YPSET{M(Oxidation (M))|F} 7.2498 + + 49 + 1 1.592 40232.5 1.0 5654 4651 10305 HBL1_DMSO_200M_050219_2,10307 HBL1_DMSO_200M_050219_2,10307,YPSETFTRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10308 55.838 12.0 4141000.0 25 0 402410.0 + 4013 DALRSGLTV 9 66 466.2639604463565 930.5133679595132 2 466.2635681033134 MULTI CID FTMS 0 0 0 10305 3893323.5 0.0197672585256062 -3 0.2753334045410156 3 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 43.9818466556824 0.0535980856389242 4 {[DA]|[EG]}{I|L}RSG{I|L}TV 9 0 + 71.009 0.0 0.0 7.6312 7.6312 92.472 0.0 0.0 0.0 10.268024924119672 16.478174818886373 10.268024924119672 10.268024924119672 0 1.742992819099939 1.6989700043360187 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}RSG{I|L}TV;[{I|L}A]DRSG{I|L}TV;{[DA]|[EG]}{I|L}R[KT]EV;[{I|L}A]DR[KT]EV 7.6312;6.5277;4.8953;3.7918 +;-;-;- + 78 1 1.592 46831.0 1.0 5655 4651 10305 HBL1_DMSO_200M_050219_2,10308 HBL1_DMSO_200M_050219_2,10308,DALRSGLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10309 55.839 22.0 2065800.0 25 0 146130.0 + -1 PLCLPTTL 8 79 457.7565494338909 0 457.7564880251884 PEAK CID FTMS 0 0 0 10305 2294457.5 0.5127629956372436 2 -0.1984024047851562 4 Carbamidomethyl (C) _PLC(Carbamidomethyl (C))LPTTL_ REV__ENSG00000072736|ENST00000346183|NFATC3;REV__ENST00000379165.8_1_16:68119584-68225707:+|nuORF;REV__ENST00000553077.5_1_16:68118971-68225707:+|nuORF;REV__ENST00000563288.5_1_16:68120670-68248329:+|nuORF;REV__ENST00000563319.5_1_16:68118971-68248329:+|nuORF;REV__ENST00000569766.5_1_16:68118971-68260371:+|nuORF;REV__nc|ENSG00000072736|Q12968-2|NFATC3;REV__nc|ENSG00000072736|Q12968-3|NFATC3;REV__nc|ENSG00000072736|Q12968-4|NFATC3;REV__nc|ENSG00000072736|Q12968-5|NFATC3;REV__nc|ENSG00000072736|Q12968-6|NFATC3 26.34127834903884 0.298120260672589 4 TNGV{I|L}Y 6 -1 37.652 0.0 0.0 4.1217 0.0 0.0 131.10152552618175 132.04575525455314 263.14728078073495 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 TNGV{I|L}Y 4.1217 - 221 + 1 1.592 40782.4 1.0 5656 4651 10305 HBL1_DMSO_200M_050219_2,10309 HBL1_DMSO_200M_050219_2,10309,PLCLPTTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10310 55.84 21.0 2199700.0 25 0 154200.0 + 30619 RFIGAVNNM 9 72 511.26605365168825 1020.5175543701764 2 511.2666198611259 MULTI CID FTMS 0 0 0 10305 1533227.125 0.4564144489589606 -2 0.1607017517089843 5 Unmodified _RFIGAVNNM_ ENSG00000165175|ENST00000614558|MID1IP1 43.85829265575387 0.0542763391141878 4 GAVNNM 6 3 40.68 0.0 0.0 3.9862 0.0 0.0 416.25377089668126 0.0 416.25377089668126 0.0 22.920335674094897 0.0 0.0 0 1.0994850021680094 0.0 0.0 0.0 + GAVNNM 3.9862 + + 93 1 1.592 42551.1 1.0 5657 4651 10305 HBL1_DMSO_200M_050219_2,10310 HBL1_DMSO_200M_050219_2,10310,RFIGAVNNM True True RFIGAVNNM 55.840183 511.266619861126 50548548.0 10305.0 ENSG00000165175|ENST00000614558|MID1IP1 6.808832327524821 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10311 55.841 32.0 1210300.0 25 0 97843.0 + 26698 NYNPAQQAF 9 70 526.7434809142165 1051.472408895233 2 526.7438842654228 MULTI CID FTMS 0 0 0 10305 1359744.125 0.3387565866766253 3 -0.3177719116210937 6 Unmodified _NYNPAQQAF_ ENSG00000111596|ENST00000229195|CNOT2;nc|ENSG00000111596|Q9NZN8-2|CNOT2;nc|ENSG00000111596|Q9NZN8-3|CNOT2;nc|ENSG00000111596|Q9NZN8-5|CNOT2 42.09456458481378 0.0639583784996157 4 [YN]NPAQ 6 3 47.695 0.0 0.0 4.536 0.0 0.0 0.0 361.1509163416733 361.1509163416733 28.2306842758112 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.7059771852360797 + [YN]NPAQ 4.536 + + 227 1 1.592 37611.6 1.0 5658 4651 10305 HBL1_DMSO_200M_050219_2,10311 HBL1_DMSO_200M_050219_2,10311,NYNPAQQAF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10312 55.843 49.0 1601000.0 25 0 355010.0 -1 VSAQIRCKL 9 69 537.8070852732394 1073.5996176132787 2 537.8079101443291 MULTI CID FTMS 0 0 0 10305 1041168.4375 0.5449096674416809 1 -0.1009559631347656 7 Carbamidomethyl (C) _VSAQIRC(Carbamidomethyl (C))KL_ ENSG00000162989|ENST00000295101|KCNJ3;nc|ENSG00000162989|P48549-2|KCNJ3 21.74664581756881 0.2544899275067181 4 [VS]KGE 5 -1 43.188 0.0 0.0 4.0227 0.0 0.0 0.0 570.3187960260374 570.3187960260374 31.76760434441812 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.5 [VS]KGE 4.0227 - 50 + 1 1.592 64493.2 1.0 5659 4651 10305 HBL1_DMSO_200M_050219_2,10312 HBL1_DMSO_200M_050219_2,10312,VSAQIRCKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10313 55.844 39.0 1095000.0 25 0 108730.0 + 44836 YPNTMVSSV 9 79 499.2366354834408 996.4587180336816 2 499.2367431521416 MULTI CID FTMS 0 0 0 10305 794434.625 0.3981403511365662 -4 0.3925971984863281 8 Unmodified _YPNTMVSSV_ ENSG00000136738|ENST00000377524|STAM 18.1463463914782 0.3454829746528889 4 [NP]TMVYSSV 9 2 [NP]TMVYS + + 20.445 17.7 2.2339 2.0518 2.0518 44.627 0.0 0.0 0.0 0.0 -4.402821967095608 -4.402821967095608 0.0 0 0.0 0.0 0.4247425010840047 0.0 [NP]TMVYSSV 2.0518 - 123 + 1 1.592 37046.1 1.0 5660 4651 10305 HBL1_DMSO_200M_050219_2,10313 HBL1_DMSO_200M_050219_2,10313,YPNTMVSSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10314 55.847 174.0 570540.0 25 0 33749.0 + 18234 KVIAQQVQL 9 120 513.8189573156244 1025.6233616980487 2 513.8190795779228 MULTI CID FTMS 0 0 0 10305 581459.8125 0.8609622065698807 2 -0.1984024047851562 9 Unmodified _KVIAQQVQL_ ENSG00000090447|ENST00000204517|TFAP4 52.268347100219714 0.0353964759249114 4 [AG]{I|L}NA{I|L}KVQ{I|L} 10 5 + 74.103 0.0 0.0 7.2252 7.2252 83.597 0.0 0.0 0.0 3.92397021754266 16.532125137753432 3.92397021754266 3.92397021754266 0 0.7059771852360797 1.6989700043360187 0.0 1.1237125054200234 [AG]{I|L}NA{I|L}KVQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QA{I|L}KVQ{I|L};[AG]VQA{I|L}KVQ{I|L};[AG]QVA{I|L}KVQ{I|L};[AG]{I|L}AN{I|L}KVQ{I|L};[AG]{I|L}NA{I|L}KV[AG]{I|L};[AG]QAV{I|L}KVQ{I|L};[AG]AQV{I|L}KVQ{I|L};[AG]{I|L}AQVKVQ{I|L};[Q{I|L}]NA{I|L}KVQ{I|L} 7.2252;6.8426;6.6382;6.4746;6.3746;6.3316;6.3055;6.2321;6.2029;6.1786 -;-;-;-;-;-;-;-;-;- 1986 1 1.592 81858.6 1.0 5661 4651 10305 HBL1_DMSO_200M_050219_2,10314 HBL1_DMSO_200M_050219_2,10314,KVIAQQVQL True True KVIAQQVQL 55.847254 513.819079577923 5209863.5 10305.0 ENSG00000090447|ENST00000204517|TFAP4 5.449532508850098 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10315 55.85 117.0 529890.0 25 0 38978.0 43531 WWWWIWWQWW 10 65 874.9041028402406 1747.7936527472812 2 875.4053222537041 MULTI CID FTMS 0 0 0 10305 475713.5 0.163485022359989 11 -1.1567001342773438 10 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 4 EEVD{I|L}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}WR{I|L}Q 14 12 + 64.567 0.0 0.0 3.6942 3.6942 73.672 0.0 0.0 0.0 5.184013239538743 12.302819856851386 5.184013239538743 6.667853209646175 0 0.4247425010840047 0.0 0.3252574989159953 0.6747425010840047 EEVD{I|L}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}WR{I|L}Q;EEVD{I|L}NW{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}WR{I|L}Q;EEVD{I|L}GGAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}WR{I|L}Q;EEVD{I|L}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}W[VG]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NW{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}WR{I|L}Q;EEVD{I|L}GGW{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}WR{I|L}Q;EEVD{I|L}NW{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}W[VG]{I|L}Q;{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}WR{I|L}Q;EEVD{I|L}NA{[VA]|[{I|L}G]}CCWR{I|L}Q;[{M(Oxidation (M))|F}E][VP]{I|L}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}WR{I|L}Q 3.6942;3.3127;3.1764;3.1764;3.1573;2.7936;2.7936;2.7083;2.7035;2.6528 -;-;-;-;-;-;-;-;-;- 731 + 1 1.592 48418.3 1.0 5662 4651 10305 HBL1_DMSO_200M_050219_2,10315 HBL1_DMSO_200M_050219_2,10315,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 10316 55.853 147.0 613250.0 25 0 48679.0 -1 AVLLFHFC 8 119 503.7622799621079 1005.510006991016 2 503.7629577517509 MULTI CID FTMS 0 0 0 10305 428876.75 0.9886976698917356 -1 0.122802734375 11 Carbamidomethyl (C) _AVLLFHFC(Carbamidomethyl (C))_ ENSG00000205442|ENST00000543880|IZUMO3 17.086550045450526 0.6584923310065985 4 {[VA]|[{I|L}G]}{I|L}TV 5 -1 46.07 0.0 0.0 4.5818 0.0 0.0 0.0 519.1711519830686 519.1711519830686 26.684531067637423 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3054621874040891 0.0 {[VA]|[{I|L}G]}{I|L}TV 4.5818 - 551 + 1 1.592 71866.5 1.0 5663 4651 10305 HBL1_DMSO_200M_050219_2,10316 HBL1_DMSO_200M_050219_2,10316,AVLLFHFC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10317 55.856 142.0 986820.0 25 0 123460.0 + 31425 RPNIPKIL 8 121 317.5433606586409 949.6082525761228 3 317.5429260134697 MULTI CID FTMS 0 0 0 10305 411848.90625 0.5264930258824071 -3 0.2753334045410156 12 Unmodified _RPNIPKIL_ REV__ENSG00000184500|ENST00000394236|PROS1 20.453626601364224 0.6087503291685402 4 PK{I|L}R 4 -1 19.619 0.0 0.0 2.066 0.0 0.0 244.1796908003112 208.0734804742797 452.25317127459095 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 PK{I|L}R 2.066 - 166 + 1 1.592 114047.4 1.0 5664 4651 10305 HBL1_DMSO_200M_050219_2,10317 HBL1_DMSO_200M_050219_2,10317,RPNIPKIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10318 55.861 322.0 491100.0 25 0 121120.0 + 23592 LTPEKFDKL 9 160 364.2096808922285 1089.6072132768854 3 364.2096435427666 MULTI CID FTMS 0 0 0 10305 294173.28125 1.0 0 0.0 13 Unmodified _LTPEKFDKL_ ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10826351-10827587:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2 36.506200033944 0.094635877243972 4 [{I|L}T]PEK{M(Oxidation (M))|F}DK{I|L} 9 0 + 58.545 0.0 0.0 5.3731 5.3731 80.884 0.0 0.0 0.0 27.147642715192504 7.721713662722422 7.721713662722422 7.721713662722422 0 0.3807196863200844 2.0 0.7742275032520141 0.1923877696554315 + + [{I|L}T]PEK{M(Oxidation (M))|F}DK{I|L};[{I|L}T]PEK{M(Oxidation (M))|F}EKV;[{I|L}T]PEK[{M(Oxidation (M))|F}T]RV;[{I|L}T]{[WT]|[RM]}DK{I|L}T{I|L};[{I|L}T][{M(Oxidation (M))|F}V]RVDK{I|L};[{I|L}T][{M(Oxidation (M))|F}T][RP]DK{I|L};[{I|L}T][{M(Oxidation (M))|F}T][PG]VDK{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}EKP{I|L}T{I|L};[{I|L}T][{M(Oxidation (M))|F}V]RVEKV;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}KEP{I|L}T{I|L} 5.3731;4.6644;4.3718;3.1209;2.69;2.4394;2.2101;1.9816;1.9813;1.8645 +;-;-;-;-;-;-;-;-;- + 680 + 1 1.592 134599.5 1.0 5665 4651 10305 HBL1_DMSO_200M_050219_2,10318 HBL1_DMSO_200M_050219_2,10318,LTPEKFDKL True True LTPEKFDKL 55.861358 364.209643542767 1787053.25 10305.0 ENST00000532383.5_1_11:10826351-10827587:-|nuORF;;ENSG00000110321|ENST00000339995|EIF4G2;;nc|ENSG00000110321|P78344-2|EIF4G2 4.668609619140625 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10319 55.868 350.0 366160.0 25 0 31297.0 + 25117 MPYTRPVKF 9 135 380.20742119368674 1137.6004341812602 3 380.2071411013603 MULTI CID FTMS 0 0 0 10305 262096.484375 1.0 0 0.0 14 Unmodified _MPYTRPVKF_ ENSG00000131725|ENST00000254029|WDR44;nc|ENSG00000131725|Q5JSH3-2|WDR44;nc|ENSG00000131725|Q5JSH3-4|WDR44 34.40172386719151 0.1061884637610825 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TRVKP{M(Oxidation (M))|F}M 9 4 + 57.802 0.0 0.0 5.081 5.081 71.415 0.0 0.0 0.0 1.7658047698074242 14.973024840566469 1.7658047698074242 1.7609125905568137 0 0.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TRVKP{M(Oxidation (M))|F}M;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TRVPK{M(Oxidation (M))|F}M;MPYTR[VP]K{M(Oxidation (M))|F};MP[VP]PV[HS]K{M(Oxidation (M))|F};[{I|L}T]{M(Oxidation (M))|F}RVKP{M(Oxidation (M))|F}M;MP[RH]V[HS]K{M(Oxidation (M))|F};[{I|L}T]{M(Oxidation (M))|F}RVPK{M(Oxidation (M))|F}M;MPYT[VG][VP]K{M(Oxidation (M))|F};MP[VP]PVR{M(Oxidation (M))|F}PV;MP[RH]VR{M(Oxidation (M))|F}PV 5.081;4.9262;4.9258;4.5946;4.517;4.4398;4.3622;4.1164;3.9769;3.8221 -;-;+;-;-;-;-;-;-;- + 1038 1 1.592 113932.2 1.0 5666 4651 10305 HBL1_DMSO_200M_050219_2,10319 HBL1_DMSO_200M_050219_2,10319,MPYTRPVKF True True MPYTRPVKF 55.867673 380.20714110136 1838174.0 10305.0 ENSG00000131725|ENST00000254029|WDR44;;nc|ENSG00000131725|Q5JSH3-4|WDR44;;nc|ENSG00000131725|Q5JSH3-2|WDR44 4.835828463236491 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10320 55.873 284.0 609890.0 25 0 95906.0 + 9564 FLIGKGGG 8 141 374.72155268048914 747.4285524277783 2 374.7211486697197 MULTI CID FTMS 0 0 0 10305 244795.859375 0.7466066830891908 -1 0.122802734375 15 Unmodified _FLIGKGGG_ ENSG00000115677|ENST00000310931|HDLBP;ENST00000479169.5_1_2:242177863-242181895:-|nuORF;ENST00000487169.5_1_2:242174673-242189369:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP 13.50788311687929 0.7113601687236069 4 {M(Oxidation (M))|F}{I|L}REA{I|L} 6 6 + 41.63 0.0 0.0 5.5697 5.5697 73.861 0.0 0.0 0.0 22.64078633505709 13.812281309285623 13.812281309285623 1.9145437882747984 0 1.024227503252014 0.0 0.4247425010840047 0.3494850021680094 {M(Oxidation (M))|F}{I|L}REA{I|L};{M(Oxidation (M))|F}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L} 5.5697;5.3136;2.3201 -;-;- 121 + 1 1.592 136887.9 1.0 5667 4651 10305 HBL1_DMSO_200M_050219_2,10320 HBL1_DMSO_200M_050219_2,10320,FLIGKGGG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10321 55.887 800.0 237250.0 25 0 38929.0 -1 0 78 1099.788506834488 3296.343691103664 3 1100.124194324017 MULTI CID FTMS 0 0 0 10305 211641.765625 0.5452095638218192 -1 0.122802734375 16 4 G[VP]PCTT{I|L} 8 -1 14.32 0.0 0.0 0.43444 0.0 0.0 1944.666397257764 580.2410982721311 2524.907495529895 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 G[VP]PCTT{I|L} 0.43444 - 374 + 1 1.592 147409.0 0.8600000143051147 5668 4651 10305 HBL1_DMSO_200M_050219_2,10321 HBL1_DMSO_200M_050219_2,10321, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10322 55.9 763.0 198040.0 25 0 13884.0 + 25116 MPYQEIKNV 9 197 561.2864784644923 1120.5584039957846 2 561.2870361208916 MULTI CID FTMS 0 0 0 10305 222212.3125 0.131789476790072 3 -0.3177719116210937 17 Unmodified _MPYQEIKNV_ ENSG00000131504|ENST00000389054|DIAPH1;nc|ENSG00000131504|O60610-2|DIAPH1;nc|ENSG00000131504|O60610-3|DIAPH1 57.24910588100465 0.0276051374632116 4 MPYQE{I|L}KNV 9 0 + 67.811 0.0 0.0 6.0515 6.0515 85.885 0.0 0.0 0.0 37.689792092294 14.001096330387398 14.001096330387398 9.208187539523747 0 1.5506484875809043 1.0 0.0 1.8539171939081167 + + MPYQE{I|L}KNV;MPY[AG]E{I|L}KNV;MPYQE{I|L}KGGV;MPY[AG]E{I|L}KGGV;MPV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[R{M(Oxidation (M))|F}]NV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QE{I|L}MKVN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEM{I|L}KVN;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QE{I|L}KMVN;MPV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}QQ{M(Oxidation (M))|F};MPVY{I|L}{M(Oxidation (M))|F}[TP]GP 6.0515;5.2297;4.985;4.1672;2.8672;2.4711;2.4079;2.0237;1.9459;1.8564 +;-;-;-;-;-;-;-;-;- + 6530 + 1 1.592 118973.3 1.0 5669 4651 10305 HBL1_DMSO_200M_050219_2,10322 HBL1_DMSO_200M_050219_2,10322,MPYQEIKNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10323 55.914 800.0 167610.0 25 0 23666.0 + 13159 HFPMQSREF 9 122 589.7740011096764 1177.5334492861527 2 589.7739135622978 MULTI CID FTMS 0 0 0 10305 185201.96875 0.6879112011539662 4 -0.3987960815429687 18 Unmodified _HFPMQSREF_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 20.41453444215458 0.284085796332423 4 H{M(Oxidation (M))|F}PMQ 5 4 44.68 0.0 0.0 3.7944 0.0 0.0 0.0 534.2273653619749 534.2273653619749 29.28788774999034 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.4247425010840047 + H{M(Oxidation (M))|F}PMQ 3.7944 + + 570 + 1 1.592 102477.8 0.9900000095367432 5670 4651 10305 HBL1_DMSO_200M_050219_2,10323 HBL1_DMSO_200M_050219_2,10323,HFPMQSREF False True HFPMQSREF 55.913795 589.773913562298 6007406.0 10305.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 6.503290971120198 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10324 55.918 154.0 590620.0 25 0 47630.0 3023 AVLDLPCEY 9 114 341.49890021584395 0 341.4987975955009 PEAK CID FTMS 0 0 0 10305 188331.828125 1.0 0 0.0 19 Unmodified _AVLDLPCEY_ ENST00000575787.1_1_17:6802758-6803315:+|nuORF 11.640296217721598 0.2934555500198502 4 G 1 9 6.9897 0.0 0.0 1.0264 0.0 0.0 538.8724209377442 82.0669191949828 620.939340132727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 1.0264 - 14 + 1 1.592 78480.3 1.0 5671 4651 10305 HBL1_DMSO_200M_050219_2,10324 HBL1_DMSO_200M_050219_2,10324,AVLDLPCEY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10325 55.932 800.0 155020.0 25 0 29787.0 + 32355 RYPEYDGRGVL 11 127 662.8352264743754 1323.6559000155507 2 663.3372070193291 MULTI CID FTMS 0 0 0 10305 143787.015625 1.0 0 0.0 20 Unmodified _RYPEYDGRGVL_ ENSG00000134900|ENST00000376052|TPP2;ENST00000490010.1_1_13:103249388-103260038:+|nuORF;nc|ENSG00000134900|P29144|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 8.444304893310646 0.8353071546977416 4 {I|L}{M(Oxidation (M))|F}H 3 11 20.177 0.0 0.0 1.5244 0.0 0.0 908.3919494008562 0.0 908.3919494008562 0.0 5.472287753157515 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}H 1.5244 - 201 1 1.592 92832.2 0.7599999904632568 5672 4651 10305 HBL1_DMSO_200M_050219_2,10325 HBL1_DMSO_200M_050219_2,10325,RYPEYDGRGVL False True RYPEYDGRGVL 55.932145 663.337207019329 1144475.875 10305.0 ENST00000490010.1_1_13:103249388-103260038:+|nuORF;;ENSG00000134900|ENST00000376052|TPP2;;nc|ENSG00000134900|P29144|TPP2;;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 2.051256020863851 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10327 55.945 610.0 254680.0 25 0 17019.0 + -1 VFCDVTNPCP 10 137 576.246447137936 1150.478341342672 2 576.2469970583916 MULTI CID FTMS 0 0 0 10326 108402.0234375 0.1775360833511439 2 -0.2168159484863281 1 Carbamidomethyl (C) _VFCDVTNPC(Carbamidomethyl (C))P_ REV__ENSG00000165474|ENST00000382848|GJB2;REV__ENSG00000169562|ENST00000361726|GJB1 14.838274106304384 0.5985701837916485 4 HAED{I|L}{NN|[MP]|[D{I|L}]|[EV]} 7 -1 23.919 0.0 0.0 2.0791 0.0 0.0 339.0914784162125 0.0 339.0914784162125 0.0 5.050179335456306 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 HAED{I|L}{NN|[MP]|[D{I|L}]|[EV]} 2.0791 - 243 1 1.592 117547.2 1.0 5673 4652 10326 HBL1_DMSO_200M_050219_2,10327 HBL1_DMSO_200M_050219_2,10327,VFCDVTNPCP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10328 55.946 25.0 2032400.0 25 0 300680.0 + 5810 DPPYSRVI 8 67 473.7532292149006 945.4919054966012 2 473.7532836794853 MULTI CID FTMS 0 0 0 10326 1961904.75 0.7697335452884341 4 -0.3967819213867187 2 Unmodified _DPPYSRVI_ ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2 34.40172386719151 0.3279500639400574 4 DPPYS[R{I|L}]V 8 2 + 74.641 0.0 0.0 7.8944 7.8944 80.003 0.0 0.0 0.0 32.946537861557985 1.1394335230683623 1.1394335230683623 1.1394335230683623 0 0.9247425010840048 2.0 0.4247425010840047 0.0 DPPYS[R{I|L}]V;DPPYS[RV]{I|L};DP{I|L}{M(Oxidation (M))|F}S[R{I|L}]V;DP{I|L}{M(Oxidation (M))|F}S[RV]{I|L};{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}S[R{I|L}]V;{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}S[RV]{I|L} 7.8944;7.7739;7.0472;6.9267;0.70392;0.5834 -;+;-;-;-;- + 86 + 1 1.592 43359.6 1.0 5674 4652 10326 HBL1_DMSO_200M_050219_2,10328 HBL1_DMSO_200M_050219_2,10328,DPPYSRVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10329 55.947 26.0 2324800.0 25 0 254170.0 + 44670 YPFKPPKV 8 74 488.2868778785377 974.5592028238756 2 488.2866699099541 MULTI CID FTMS 0 0 0 10326 1586214.75 0.052165247060758 -23 1.9903640747070312 3 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 23.1484247019978 0.5573009939494978 4 YP{M(Oxidation (M))|F}K 4 4 52.735 0.0 0.0 5.4112 0.0 0.0 0.0 436.25750376695527 436.25750376695527 29.089934634871284 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + YP{M(Oxidation (M))|F}K 5.4112 + + 226 + 1 1.592 50171.6 1.0 5675 4652 10326 HBL1_DMSO_200M_050219_2,10329 HBL1_DMSO_200M_050219_2,10329,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10330 55.949 55.0 1155400.0 25 0 131970.0 + 30810 RIIDTVAQV 9 98 507.8005772667989 1013.586601600398 2 507.8011962771416 MULTI CID FTMS 0 0 0 10326 824657.125 0.471346877139581 -1 0.1009559631347656 4 Unmodified _RIIDTVAQV_ ENSG00000102699|ENST00000381989|PARP4 39.94969957227396 0.0757326808254658 4 AVVTVAQV 8 4 40.693 0.0 0.0 4.0147 0.0 0.0 228.11143691230623 0.0 228.11143691230623 0.0 25.119478172486467 0.0 0.0 0 1.0172203223519531 0.0 0.75 0.0 AVVTVAQV 4.0147 - 73 1 1.592 56969.6 1.0 5676 4652 10326 HBL1_DMSO_200M_050219_2,10330 HBL1_DMSO_200M_050219_2,10330,RIIDTVAQV True True RIIDTVAQV 55.948599 507.801196277142 23849632.0 10326.0 ENSG00000102699|ENST00000381989|PARP4 5.572932561238607 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10331 55.951 94.0 839880.0 25 0 63509.0 + + 19480 RVIDREGVYEI 11 77 450.2454976513129 1347.7146635541387 3 450.2458984255791 MULTI CID FTMS 0 0 0 10326 614945.375 0.5098172899166696 -2 0.2237586975097656 5 Unmodified _LFHQLFHFFL_ ENSG00000166199|ENST00000302708|ALKBH3;ENST00000533200.5_1_11:43904193-43919192:+|nuORF 15.847184025352805 0.5816416552707754 4 YE{I|L} 3 -1 28.188 0.0 0.0 2.0915 0.0 0.0 924.5163293991232 0.0 924.5163293991232 0.0 16.197887582883936 0.0 0.0 0 0.5 0.0 0.0 0.0 YE{I|L} 2.0915 - 107 1 1.592 70077.2 1.0 5677 4652 10326 HBL1_DMSO_200M_050219_2,10331 HBL1_DMSO_200M_050219_2,10331,LFHQLFHFFL False False RVIDREGVYEI 55.950657 450.245898425579 30467665.0 10326.0 ENSG00000166199|ENST00000302708|ALKBH3;;ENST00000533200.5_1_11:43904193-43919192:+|nuORF 6.900411764780681 3.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10332 55.953 107.0 615170.0 25 0 64216.0 + -1 RFIGAVNNM 9 105 519.2625719984013 1036.5105910636023 2 519.2630493044853 MULTI CID FTMS 0 0 0 10326 401040.125 1.0 0 0.0 6 Oxidation (M) _RFIGAVNNM(Oxidation (M))_ ENSG00000165175|ENST00000614558|MID1IP1 37.97399986684836 0.0865783450051559 4 QVNN{M(Oxidation (M))|F} 5 -1 45.305 0.0 0.0 4.3709 0.0 0.0 416.255174705275 0.0 416.255174705275 0.0 32.559034764951846 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.4247425010840047 QVNN{M(Oxidation (M))|F} 4.3709 - 94 1 1.592 54868.3 1.0 5678 4652 10326 HBL1_DMSO_200M_050219_2,10332 HBL1_DMSO_200M_050219_2,10332,RFIGAVNNM False False RFIGAVNNM 55.952934 519.263049304485 2633585.0 10326.0 ENSG00000165175|ENST00000614558|MID1IP1 5.606824398040772 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10333 55.956 136.0 761600.0 25 0 47866.0 26762 PACTKSYSI 9 119 485.2373771265082 968.4602013198164 2 485.2379028201103 MULTI CID FTMS 0 0 0 10326 331113.3125 0.4107826259023793 -1 0.1009559631347656 7 Unmodified _PACTKSYSI_ ENST00000272542.7_1_2:113416849-113416969:+|nuORF 13.50788311687929 0.4710407108020397 4 [PA]Y 3 6 18.116 0.0 0.0 1.8706 0.0 0.0 0.0 634.2793901228039 634.2793901228039 5.016894462103995 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [PA]Y 1.8706 - 219 1 1.592 83473.6 1.0 5679 4652 10326 HBL1_DMSO_200M_050219_2,10333 HBL1_DMSO_200M_050219_2,10333,PACTKSYSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10334 55.967 662.0 563740.0 25 0 143680.0 + 32009 RVIDREGVYEI 11 149 674.8638999012027 1347.7132468692052 2 674.8657104372978 MULTI CID FTMS 0 0 0 10326 284269.1875 0.3651765077287265 -2 0.2237586975097656 8 Unmodified _RVIDREGVYEI_ ENSG00000166199|ENST00000302708|ALKBH3;ENST00000533200.5_1_11:43904193-43919192:+|nuORF 51.76506608216692 0.1078551230621665 4 [RV]{I|L}DRE[YR]E{I|L} 10 2 + 46.916 0.0 0.0 3.4812 3.4812 62.631 0.0 0.0 0.0 6.232537001399017 7.315578562017713 6.232537001399017 0.2287874528033739 0 1.5941876774005248 0.0 0.0 1.3684151806525389 [RV]{I|L}DRE[YR]E{I|L};[RV]MPRE[YR]E{I|L};{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]TGAR[PS]A{I|L};[VG]V[HS]PTGAR[PS]A{I|L};[RV]{I|L}D[VG]E[YR]E{I|L};[RV]MP[VG]E[YR]E{I|L};{I|L}{M(Oxidation (M))|F}[YR]ERP[PS]A{I|L};[VG]V{I|L}D{I|L}{[ES]|[DT]|[{I|L}C]}[W{M(Oxidation (M))|F}]A{I|L};[VG]V{I|L}D{I|L}{[ES]|[DT]|[{I|L}C]}[KP][YE];{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]TQR[PS]A{I|L} 3.4812;3.4642;2.8842;2.8381;2.8012;2.7842;2.7585;2.7032;2.631;2.617 -;-;-;-;-;-;-;-;-;- 2622 1 1.592 261674.1 1.0 5680 4652 10326 HBL1_DMSO_200M_050219_2,10334 HBL1_DMSO_200M_050219_2,10334,RVIDREGVYEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10335 55.976 475.0 431270.0 25 0 52302.0 -1 0 201 347.22416444463295 692.4337759560659 2 347.2238952517509 MULTI CID FTMS 0 0 0 10326 233877.796875 1.0 0 0.0 9 4 {I|L}{I|L}HR 4 -1 39.897 0.0 0.0 5.7619 0.0 0.0 155.09417932910816 0.0 155.09417932910816 0.0 30.219290379736464 0.0 0.0 0 0.2742275032520141 0.0 0.0 1.1237125054200234 {I|L}{I|L}HR 5.7619 - 68 + 1 1.592 167071.2 1.0 5681 4652 10326 HBL1_DMSO_200M_050219_2,10335 HBL1_DMSO_200M_050219_2,10335, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10336 55.978 113.0 598730.0 25 0 39954.0 + 41656 VPPTSPQAL 9 94 455.2555885603596 908.4966241875192 2 455.2565185427666 MULTI CID FTMS 0 0 0 10326 250071.84375 0.0135874346767988 16 -1.4522590637207031 10 Unmodified _VPPTSPQAL_ REV__ENSG00000105085|ENST00000263390|MED26 8.593279151180031 0.6146971463335029 4 {I|L} 1 -1 13.099 0.0 0.0 1.4418 0.0 0.0 777.4014073679864 0.0 777.4014073679864 0.0 2.261488354973152 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4418 + + 56 + 1 1.592 61453.2 1.0 5682 4652 10326 HBL1_DMSO_200M_050219_2,10336 HBL1_DMSO_200M_050219_2,10336,VPPTSPQAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10337 55.992 800.0 239770.0 25 0 23838.0 -1 0 80 993.1034761027264 4960.480998180631 5 993.3060180544852 MULTI CID FTMS 0 0 0 10326 179793.3125 1.0 0 0.0 11 4 M 1 -1 11.99 0.0 0.0 0.2417 0.0 0.0 1216.5959474515273 3609.848778506337 4826.444725957865 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 M 0.2417 - 72 + 1 1.592 129262.8 0.9100000262260436 5683 4652 10326 HBL1_DMSO_200M_050219_2,10337 HBL1_DMSO_200M_050219_2,10337, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10338 56.001 514.0 361370.0 25 0 80388.0 14452 IFSTLIFSGF 10 167 377.8728030215931 1130.5965796649791 3 377.8726074099541 MULTI CID FTMS 0 0 0 10326 104701.046875 0.6902230605001122 -1 0.1009559631347656 12 Unmodified _IFSTLIFSGF_ ENSG00000205359|ENST00000506729|SLCO6A1;nc|ENSG00000205359|Q86UG4-2|SLCO6A1;nc|ENSG00000205359|Q86UG4-3|SLCO6A1 5.783430956126388 0.6998847395148697 4 PH[HQ] 4 10 10.177 0.0 0.0 0.90017 0.0 0.0 613.3724157061367 0.0 613.3724157061367 0.0 0.1772876696043113 0.0 0.0 0 0.0 0.0 0.0 0.0 PH[HQ] 0.90017 - 159 1 1.592 153735.2 1.0 5684 4652 10326 HBL1_DMSO_200M_050219_2,10338 HBL1_DMSO_200M_050219_2,10338,IFSTLIFSGF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10339 56.016 800.0 540370.0 25 0 108770.0 + 43815 YFDEHYEY 8 179 583.2273825919044 1164.4402122506087 2 583.2253906130791 MULTI CID FTMS 0 0 0 10326 102897.5078125 0.0174595972440825 -3 0.26165771484375 13 Unmodified _YFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 74.42276476219924 0.1056688965812189 4 [YE]HD{M(Oxidation (M))|F}YEY 8 4 + 76.38 0.0 0.0 6.5594 6.5594 76.779 0.0 0.0 0.0 1.4608280609188284 11.40978057358332 1.4608280609188284 1.4608280609188284 0 1.079689690656103 1.3010299956639813 1.5228787452803376 0.0 [YE]HD{M(Oxidation (M))|F}YEY;Y{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}DT{M(Oxidation (M))|F}Y;{[WN]|[YH]}ED{M(Oxidation (M))|F}YEY;[YE]HD{M(Oxidation (M))|F}EYY;Y{M(Oxidation (M))|F}DEHEYY;{[YC]|[HE]}DY{M(Oxidation (M))|F}YEY;{[WN]|[YH]}ED{M(Oxidation (M))|F}EYY;[YE]HDE{M(Oxidation (M))|F}YY;{[WN]|[YH]}EDEY{M(Oxidation (M))|F}Y;{[YC]|[HE]}YD{M(Oxidation (M))|F}YEY 6.5594;6.4339;6.361;5.9739;5.8659;5.8287;5.7755;5.7652;5.5738;5.5702 -;-;-;-;-;-;-;-;-;- 9200 1 1.592 315181.2 0.8399999737739563 5685 4652 10326 HBL1_DMSO_200M_050219_2,10339 HBL1_DMSO_200M_050219_2,10339,YFDEHYEY True True YFDEHYEY 56.015892 583.225390613079 121019496.0 10326.0 ENSG00000123975|ENST00000314355|CKS2 8.24263604482015 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10340 56.03 800.0 86683.0 25 0 9036.1 -1 0 92 740.6759521365166 0 740.6759521365166 PEAK CID FTMS 0 0 0 -1 0 14 4 C(Carbamidomethyl (C)) 1 -1 6.9897 0.0 0.0 0.47249 0.0 0.0 388.8136219470581 927.4914247182028 1316.3050466652608 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.47249 - 164 + 1 1.592 59657.8 0.8199999928474426 5686 4652 10326 HBL1_DMSO_200M_050219_2,10340 HBL1_DMSO_200M_050219_2,10340, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10342 56.034 2.8 17472000.0 25 0 1660700.0 19702 LGLTNQPEL 9 72 492.7714541632418 983.5283553932836 2 492.7719299197197 MULTI CID FTMS 0 0 0 10341 20034884.0 1.0 0 0.0 1 Unmodified _LGLTNQPEL_ ENSG00000179626|ENST00000641569|OR6C4 60.38955033654506 0.025866396858536 4 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L} 6 6 46.493 0.0 0.0 4.7272 0.0 0.0 0.0 354.1642556220524 354.1642556220524 16.07386545501626 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.3807196863200844 0.9604093769761876 {[QN]|[E{I|L}]|[KN]}T{I|L}G{I|L} 4.7272 - 243 1 1.579 46259.9 1.0 5687 4653 10341 HBL1_DMSO_200M_050219_2,10342 HBL1_DMSO_200M_050219_2,10342,LGLTNQPEL True True AVITNQPEI 56.033871 492.77192991972 432660576.0 10341.0 ENST00000557100.5_1_14:35871861-35873850:-|nuORF;;ENSG00000100906|ENST00000216797|NFKBIA;;ENST00000557459.1_1_14:35872311-35873850:-|nuORF;;NFKBIA|p.C215Vfs*23|1|0.14|ENSG00000100906|chr14:35402658-35402658|G/-|frameshift_variant 4.763955911000569 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10343 56.035 12.0 6889600.0 25 0 1376300.0 + 44660 YPFKPPKV 8 71 325.86056900573425 974.5598776174028 3 325.8601257205009 MULTI CID FTMS 0 0 0 10341 4588299.0 0.07110650756956 -22 1.9704818725585933 2 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 51.228 0.0 0.0 5.2565 5.2565 87.422 0.0 0.0 0.0 24.597284425501726 5.617884338781352 5.617884338781352 37.58305975837601 0 0.0 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T][KP]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.2565;1.4001;0.60167 +;-;- + 151 + 1 1.579 71787.4 1.0 5688 4653 10341 HBL1_DMSO_200M_050219_2,10343 HBL1_DMSO_200M_050219_2,10343,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10344 56.036 27.0 1916900.0 25 0 183730.0 + 17888 KQMSISTGL 9 94 482.75993265737617 963.5053123815524 2 482.7603332400322 MULTI CID FTMS 0 0 0 10341 2129433.0 0.8628583411082172 1 -0.1193695068359375 3 Unmodified _KQMSISTGL_ ENSG00000109805|ENST00000251496|NCAPG 45.69961567697781 0.0497987121815769 4 GNMS{I|L}STG{I|L} 9 2 44.0 0.0 0.0 4.5666 0.0 0.0 85.09000594306796 0.0 85.09000594306796 0.0 18.938069195690872 0.0 0.0 0 1.3182503180159344 0.0 0.7302046884880937 0.3494850021680094 GNMS{I|L}STG{I|L} 4.5666 - 294 1 1.579 44121.5 1.0 5689 4653 10341 HBL1_DMSO_200M_050219_2,10344 HBL1_DMSO_200M_050219_2,10344,KQMSISTGL True True KQMSISTGL 56.03623 482.760333240032 18704372.0 10341.0 ENSG00000109805|ENST00000251496|NCAPG 6.277210076649983 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10345 56.037 21.0 2282300.0 25 0 536040.0 + 15070 IMHIQSNFL 9 78 368.19447723393614 1101.5616023020084 3 368.1942016482353 MULTI CID FTMS 0 0 0 10341 2097097.375 0.2174519624050584 32 -2.949329376220703 4 Unmodified _IMHIQSNFL_ REV__ENSG00000157578|ENST00000288350|LCA5L 12.531546534597751 0.4974689918368763 4 {I|L} 1 -1 13.099 0.0 0.0 1.1891 0.0 0.0 970.4666906582568 0.0 970.4666906582568 0.0 -13.098943791441968 -13.098943791441968 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1891 + + 102 + 1 1.579 44107.6 1.0 5690 4653 10341 HBL1_DMSO_200M_050219_2,10345 HBL1_DMSO_200M_050219_2,10345,IMHIQSNFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10346 56.039 21.0 2411700.0 25 0 252300.0 + 41268 VPHDLEVQI 9 71 525.2850203801842 1048.5554878271682 2 525.2851440310478 MULTI CID FTMS 0 0 0 10341 1968847.125 0.1730432618014736 6 -0.6333236694335938 5 Unmodified _VPHDLEVQI_ ENST00000218981.5_1_13:52365364-52378245:-|nuORF;nc|ENSG00000102796|A0PJE2|DHRS12 34.10243960390752 0.1078313939113124 4 VPDT 4 6 55.745 0.0 0.0 5.3164 0.0 0.0 0.0 633.3383475590149 633.3383475590149 24.04561271747021 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.7742275032520141 0.0 VPDT 5.3164 - 112 + 1 1.579 49076.2 1.0 5691 4653 10341 HBL1_DMSO_200M_050219_2,10346 HBL1_DMSO_200M_050219_2,10346,VPHDLEVQI True False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 10347 56.04 51.0 815500.0 25 0 49875.0 + 30174 QVTNEFQTV 9 83 533.2638854345932 1064.5132179359864 2 533.2642089724541 MULTI CID FTMS 0 0 0 10341 1360461.25 0.7634463753432064 1 -0.1193695068359375 6 Unmodified _QVTNEFQTV_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 48.345845343767074 0.0439967357579942 4 {NN|[MP]|[D{I|L}]|[EV]}QQSEQ 7 7 22.016 0.0 0.0 2.0682 0.0 0.0 0.0 233.11518261788007 233.11518261788007 -0.1234532551189993 0.0 -0.1234532551189993 0.0 0 0.0 1.2218487496163564 0.5796896906561032 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}QQSEQ 2.0682 - 243 1 1.579 43342.6 1.0 5692 4653 10341 HBL1_DMSO_200M_050219_2,10347 HBL1_DMSO_200M_050219_2,10347,QVTNEFQTV True True QVTNEFQTV 56.039942 533.264208972454 14904794.0 10341.0 ENSG00000163535|ENST00000357799|SGO2;;nc|ENSG00000163535|Q562F6-2|SGO2 5.631869395573934 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10348 56.041 55.0 1035500.0 25 0 100490.0 + 3814 DAIRLKEI 8 85 479.2897716988677 956.5649904645352 2 479.2899047732353 MULTI CID FTMS 0 0 0 10341 1045409.6875 1.0 0 0.0 7 Unmodified _DAIRLKEI_ ENSG00000151746|ENST00000652176|BICD1;ENSG00000185963|ENST00000356884|BICD2;nc|ENSG00000151746|Q96G01-3|BICD1;nc|ENSG00000151746|Q96G01-4|BICD1;nc|ENSG00000185963|Q8TD16|BICD2 47.74868867922204 0.1498366402366518 4 {[DA]|[EG]}{I|L}R{I|L}KE{I|L} 8 0 + 62.024 0.0 0.0 6.4841 6.4841 90.705 0.0 0.0 0.0 16.989700043360187 16.40978057358332 16.40978057358332 16.989700043360187 0 0.6435078169319297 2.0 0.3807196863200844 0.2396518287104437 + + {[DA]|[EG]}{I|L}R{I|L}KE{I|L};{[QN]|[E{I|L}]|[KN]}GR{I|L}KE{I|L};{I|L}{I|L}[RK]ADE{I|L};{I|L}WVVAKE{I|L};{I|L}{I|L}[WK][VG]E{I|L};{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L};{[QN]|[E{I|L}]|[KN]}[RK]{[VA]|[{I|L}G]}E{I|L} 6.4841;4.7079;4.226;3.4006;2.3964;2.3964;1.8498 +;-;-;-;-;-;- + 196 1 1.579 50318.3 1.0 5693 4653 10341 HBL1_DMSO_200M_050219_2,10348 HBL1_DMSO_200M_050219_2,10348,DAIRLKEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10349 56.043 76.0 957700.0 25 0 96027.0 + 34606 SPIVSPRI 8 77 434.7660548721096 867.5175568110193 2 434.7660400271416 MULTI CID FTMS 0 0 0 10341 982924.0625 1.0 0 0.0 8 Unmodified _SPIVSPRI_ ENSG00000112029|ENST00000229758|FBXO5;nc|ENSG00000112029|Q9UKT4-2|FBXO5 41.8396318013385 0.2035142800366642 4 SP{I|L}VS[RP]{I|L} 8 0 + 73.512 0.0 0.0 8.4738 8.4738 98.294 0.0 0.0 0.0 53.22165173588351 6.305882679774712 6.305882679774712 73.51210786405551 0 0.9247425010840048 2.0 0.0 0.7742275032520141 + + SP{I|L}VS[RP]{I|L} 8.4738 + + 87 + 1 1.579 61440.4 1.0 5694 4653 10341 HBL1_DMSO_200M_050219_2,10349 HBL1_DMSO_200M_050219_2,10349,SPIVSPRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10350 56.044 49.0 990000.0 25 0 99925.0 + 4601 DAYTHPQFV 9 78 539.2534588118743 1076.4923646905486 2 539.2540161013603 MULTI CID FTMS 0 0 0 10341 977958.0625 0.2112899029342685 -3 0.3212051391601562 9 Unmodified _DAYTHPQFV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 43.77239144664712 0.0547478964384323 4 {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F}V 9 0 + 59.459 0.0 0.0 5.5234 5.5234 85.786 0.0 0.0 0.0 5.127881306118454 5.127881306118454 5.127881306118454 12.385606273598311 0 2.1549471895720984 2.0 0.0 0.3807196863200844 + + {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F}V;{[DA]|[EG]}Y[HT][VS]WV;{[DA]|[EG]}Y{[MG]|[TS]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}V;{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}[QP]W{M(Oxidation (M))|F}V;[HT]Y{[DA]|[EG]}[QP]{M(Oxidation (M))|F}V;[HT]YHHH{M(Oxidation (M))|F}V;{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}HHH{M(Oxidation (M))|F}V;{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}[QP]{M(Oxidation (M))|F}WV;[HT]Y{[DA]|[EG]}[VS]WV;[HT]Y[QP]{[DA]|[EG]}{M(Oxidation (M))|F}V 5.5234;4.3729;3.9824;2.5518;2.4937;2.1668;2.1086;1.8776;1.8195;1.7496 +;-;-;-;-;-;-;-;-;- + 244 + 1 1.579 44555.7 1.0 5695 4653 10341 HBL1_DMSO_200M_050219_2,10350 HBL1_DMSO_200M_050219_2,10350,DAYTHPQFV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10351 56.053 458.0 815600.0 25 0 59156.0 -1 MLPPPTARVS 10 173 542.7934218667502 1083.5722908003004 2 542.7911254763603 MULTI CID FTMS 0 0 0 10341 439457.96875 0.023724271616795 41 -3.8987960815429688 10 Oxidation (M) _M(Oxidation (M))LPPPTARVS_ ENST00000511502.5_1_1:1563180-1563657:+|nuORF 27.628801355627647 0.3479284626772844 4 YPP{I|L}ASR 7 -1 81.619 0.0 0.0 7.5324 0.0 0.0 0.0 296.12604700260005 296.12604700260005 57.22915131302791 0.0 0.0 0.0 0 0.9456290139465237 2.0 0.2887254899964357 1.1351518780601924 YPP{I|L}ASR 7.5324 - 6800 + 1 1.579 294079.1 1.0 5696 4653 10341 HBL1_DMSO_200M_050219_2,10351 HBL1_DMSO_200M_050219_2,10351,MLPPPTARVS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10352 56.062 511.0 213850.0 25 0 15381.0 -1 0 93 881.9127461829552 1761.8109394327105 2 882.4158203005791 MULTI CID FTMS 0 0 0 10341 391625.90625 0.3829511999313549 5 -0.5356826782226562 11 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEAQ{[NV]|[RG]}D{M(Oxidation (M))|F}{I|L}Q 15 -1 + 67.819 0.0 0.0 3.8494 3.8494 75.939 0.0 0.0 0.0 7.6176083419547425 10.30726239543597 7.6176083419547425 9.018637558036673 0 0.5 0.0 0.4247425010840047 0.7302046884880937 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEAQ{[NV]|[RG]}D{M(Oxidation (M))|F}{I|L}Q;EEVD{I|L}NEAQ{[NV]|[RG]}D{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEA[AG]{[NV]|[RG]}D{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}GGEAQ{[NV]|[RG]}D{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEA[PS]A[NS]{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NEP[TP]AEN{I|L}DP{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}N{[TV]|[{I|L}S]}Q{[NV]|[RG]}D{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}[WQ]Q{[NV]|[RG]}D{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NQ{[TV]|[{I|L}S]}{[NV]|[RG]}D{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NQ[KQ]A[NS]{M(Oxidation (M))|F}{I|L}Q 3.8494;3.3375;3.3368;3.3368;3.2659;3.2644;3.2268;3.1179;3.0559;2.985 -;-;-;-;-;-;-;-;-;- 2114 + 1 1.579 75213.9 1.0 5697 4653 10341 HBL1_DMSO_200M_050219_2,10352 HBL1_DMSO_200M_050219_2,10352, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10353 56.065 191.0 418920.0 25 0 35640.0 + 10264 FQVGTSEEM 9 119 514.2236999262767 1026.432846919353 2 514.2241088747978 MULTI CID FTMS 0 0 0 10341 365833.84375 1.0 0 0.0 12 Unmodified _FQVGTSEEM_ ENSG00000126883|ENST00000359428|NUP214;ENST00000525980.5_1_9:134025776-134070755:+|nuORF;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214 21.74664581756881 0.2544899275067181 4 EE[KQ]S{M(Oxidation (M))|F}EM 8 6 EE[KQ]S{M(Oxidation (M))|F} + + 20.445 1.3992 0.18698 1.9919 1.9919 44.585 0.0 0.0 0.0 0.0 4.005149978319906 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 EE[KQ]S{M(Oxidation (M))|F}EM 1.9919 - 216 + 1 1.579 66706.0 1.0 5698 4653 10341 HBL1_DMSO_200M_050219_2,10353 HBL1_DMSO_200M_050219_2,10353,FQVGTSEEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10354 56.074 491.0 410680.0 25 0 31611.0 28667 PVPCVPTAPRP 11 172 567.3090846581649 1132.6036163831295 2 567.3093749880791 MULTI CID FTMS 0 0 0 10341 351021.71875 0.6675560722508667 -1 0.0974464416503906 13 Unmodified _PVPCVPTAPRP_ ENST00000367602.7_1_1:180167664-180168105:+|nuORF 15.248480904072842 0.7179608125786238 4 {[QN]|[E{I|L}]|[KN]}[QA]VPV{I|L} 8 9 30.057 0.0 0.0 2.6538 0.0 0.0 0.0 280.0835717876798 280.0835717876798 9.650924567037098 0.0 0.0 0.0 0 0.3054621874040891 0.8239087409443188 1.4940840204505517 0.0 {[QN]|[E{I|L}]|[KN]}[QA]VPV{I|L} 2.6538 - 1491 1 1.579 151108.5 1.0 5699 4653 10341 HBL1_DMSO_200M_050219_2,10354 HBL1_DMSO_200M_050219_2,10354,PVPCVPTAPRP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10355 56.085 647.0 404620.0 25 0 18422.0 + 26627 NVVDHIKGLET 11 211 408.8909531370206 1223.6510300112618 3 408.8911926150322 MULTI CID FTMS 0 0 0 10341 275481.59375 0.7846620889873026 -1 0.0974464416503906 14 Unmodified _NVVDHIKGLET_ ENSG00000111300|ENST00000261745|NAA25 49.52724829834842 0.1202481389936634 4 {[NV]|[RG]}VH{I|L}RPGMTT 11 5 + 40.552 0.0 0.0 3.314 3.314 67.249 0.0 0.0 0.0 8.72799350597748 11.3648184364315 8.72799350597748 2.9980376447570407 0 0.3252574989159953 0.0 1.4802046884880935 0.0 {[NV]|[RG]}VH{I|L}RPGMTT;{[NV]|[RG]}P[QA]{I|L}H{I|L}MTT;{[NV]|[RG]}VDH{I|L}[VG][TA]VT;{[NV]|[RG]}V{M(Oxidation (M))|F}T[KA]{I|L}MTT;{[NV]|[RG]}V{M(Oxidation (M))|F}TRRMTT;{[NV]|[RG]}VHAVVPGMTT;{[NV]|[RG]}PP{I|L}VVPGMTT;{[NV]|[RG]}P[QA]{I|L}HV{M(Oxidation (M))|F}VT;{[NV]|[RG]}V{M(Oxidation (M))|F}T[KA]V{M(Oxidation (M))|F}VT;{[NV]|[RG]}VDH[R{I|L}][TA]VT 3.314;3.069;3.059;3.0571;2.9096;2.8932;2.8339;2.8148;2.8028;2.7647 -;-;-;-;-;-;-;-;-;- 11437 + 1 1.579 204249.3 1.0 5700 4653 10341 HBL1_DMSO_200M_050219_2,10355 HBL1_DMSO_200M_050219_2,10355,NVVDHIKGLET True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10356 56.095 544.0 487680.0 25 0 52678.0 + 12612 GVISDTELQQA 11 182 580.7931769527355 1159.571800972271 2 580.7923461794853 MULTI CID FTMS 0 0 0 10341 281537.78125 0.0880928750563218 -2 0.1984024047851562 15 Unmodified _GVISDTELQQA_ ENSG00000249915|ENST00000264933|PDCD6;ENST00000507290.5_1_5:1632852-1634017:-|nuORF;ENST00000507505.5_1_5:1599907-1634017:-|nuORF;ENST00000507841.5_1_5:1632852-1634017:-|nuORF;ENST00000515587.1_1_5:271739-272994:+|nuORF;nc|ENSG00000249915|O75340-2|PDCD6;nc|ENSG00000249915|O75340-3|PDCD6 103.35351024395868 0.0039835977390119 4 [AG]AQMSR{I|L}Q[QA] 11 6 + 69.83 0.0 0.0 6.022 6.022 73.896 0.0 0.0 0.0 7.716072845057049 5.862435673934272 5.862435673934272 0.991667278429361 0 0.6307196863200843 1.3979400086720375 1.2302046884880935 0.3252574989159953 [AG]AQMSR{I|L}Q[QA];[AG]AQMSGV{I|L}Q[QA];[AG]QAMSR{I|L}Q[QA];[AG]AGAMSR{I|L}Q[QA];[AG]QAMSGV{I|L}Q[QA];[AG]AGAMSGV{I|L}Q[QA];[AG]AQMS{I|L}GVQ[QA];[QA]GAMSR{I|L}Q[QA];[AG]AQMS{I|L}RQ[QA];[QA]GAMSGV{I|L}Q[QA] 6.022;5.9365;5.7206;5.7089;5.6351;5.626;5.43;5.3566;5.3521;5.2711 -;-;-;-;-;-;-;-;-;- 19290 1 1.579 192287.9 1.0 5701 4653 10341 HBL1_DMSO_200M_050219_2,10356 HBL1_DMSO_200M_050219_2,10356,GVISDTELQQA True True GVISDTELQQA 56.094767 580.792346179485 50351240.0 10341.0 ENST00000507841.5_1_5:1632852-1634017:-|nuORF;;ENST00000507290.5_1_5:1632852-1634017:-|nuORF;;ENSG00000249915|ENST00000264933|PDCD6;;nc|ENSG00000249915|O75340-2|PDCD6;;ENST00000515587.1_1_5:271739-272994:+|nuORF;;ENST00000507505.5_1_5:1599907-1634017:-|nuORF;;nc|ENSG00000249915|O75340-3|PDCD6 6.300210952758789 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10357 56.105 567.0 218560.0 25 0 23290.0 + 26628 NVVDHIKGLET 11 138 612.8331900834125 1223.651827233625 2 612.8330566287041 MULTI CID FTMS 0 0 0 10341 263461.65625 0.7956949394666634 -1 0.0974464416503906 16 Unmodified _NVVDHIKGLET_ ENSG00000111300|ENST00000261745|NAA25 70.32083430771065 0.0314747710216561 4 NVVDH{I|L} 6 5 76.921 0.0 0.0 6.2862 0.0 0.0 0.0 543.2794134661991 543.2794134661991 23.26514264288147 0.0 0.0 0.0 0 1.6861818737241734 2.0 0.6694451763165201 0.0 + NVVDH{I|L} 6.2862 + + 4437 + 1 1.579 93824.6 1.0 5702 4653 10341 HBL1_DMSO_200M_050219_2,10357 HBL1_DMSO_200M_050219_2,10357,NVVDHIKGLET True True NVVDHIKGLET 56.104725 612.833056628704 4701089.0 10341.0 ENSG00000111300|ENST00000261745|NAA25 7.233457247416179 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10358 56.119 756.0 405670.0 25 0 54881.0 + 6567 EALRVVKI 8 217 309.8709098015088 926.5909000047262 3 309.8707458376884 MULTI CID FTMS 0 0 0 10341 240074.1875 1.0 0 0.0 17 Unmodified _EALRVVKI_ ENSG00000004534|ENST00000266022|RBM6;ENST00000441115.5_1_3:50012785-50103056:+|nuORF;nc|ENSG00000004534|P78332-2|RBM6 26.268140514670165 0.4916104673212489 4 EA{I|L}{I|L}[Q{I|L}]K{I|L} 8 3 + 55.939 0.0 0.0 6.0371 6.0371 76.027 0.0 0.0 0.0 23.622244564055023 5.458248768983324 5.458248768983324 2.04119982655925 0 0.4247425010840047 0.721246399047171 0.0 0.7134679910804405 EA{I|L}{I|L}[Q{I|L}]K{I|L};EA{I|L}RVVK{I|L};EA{I|L}KV[RV]{I|L};EA{I|L}{I|L}AAVK{I|L};EA{I|L}{I|L}[Q{I|L}]{I|L}K;EA{I|L}RVV{I|L}K;EA{I|L}{I|L}AAV{I|L}K;EA{I|L}[VG]VVK{I|L};E{I|L}A{I|L}[Q{I|L}]K{I|L};E{I|L}ARVVK{I|L} 6.0371;5.8168;5.7255;5.5715;5.448;5.2277;4.9825;4.8172;4.7438;4.5235 -;+;-;-;-;-;-;-;-;- + 520 + 1 1.579 244937.5 1.0 5703 4653 10341 HBL1_DMSO_200M_050219_2,10358 HBL1_DMSO_200M_050219_2,10358,EALRVVKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10359 56.123 187.0 192470.0 25 0 11985.0 + 43651 YARHEEKLSL 10 72 623.3319596889266 1244.6493664446532 2 623.3329955935478 MULTI CID FTMS 0 0 0 10341 217115.59375 0.5753000438118078 -1 0.0974464416503906 18 Unmodified _YARHEEKLSL_ REV__ENSG00000185811|ENST00000331340|IKZF1;REV__nc|ENSG00000185811|Q13422-2|IKZF1;REV__nc|ENSG00000185811|Q13422-3|IKZF1;REV__nc|ENSG00000185811|Q13422-4|IKZF1;REV__nc|ENSG00000185811|Q13422-5|IKZF1;REV__nc|ENSG00000185811|Q13422-6|IKZF1;REV__nc|ENSG00000185811|Q13422-7|IKZF1 11.640296217721598 0.652229146672156 4 TTV 3 -1 26.995 0.0 0.0 2.1689 0.0 0.0 925.4734458897688 0.0 925.4734458897688 0.0 4.577074512908332 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TTV 2.1689 - 49 + 1 1.579 31504.8 1.0 5704 4653 10341 HBL1_DMSO_200M_050219_2,10359 HBL1_DMSO_200M_050219_2,10359,YARHEEKLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10360 56.137 800.0 132110.0 25 0 24163.0 -1 0 60 1151.1470159953058 3450.419218586117 3 1151.481494128704 MULTI CID FTMS 0 0 0 10341 193755.59375 1.0 0 0.0 19 4 DA 2 -1 10.969 0.0 0.0 0.31791 0.0 0.0 2519.9030670125057 741.4441622369749 3261.3472292494807 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DA 0.31791 - 28 + 1 1.579 81457.6 0.8700000047683716 5705 4653 10341 HBL1_DMSO_200M_050219_2,10360 HBL1_DMSO_200M_050219_2,10360, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10361 56.149 641.0 260110.0 25 0 24967.0 + 43687 YAYDGKDYL 9 169 554.2533874371126 1106.492221941025 2 554.2377197146416 MULTI CID FTMS 0 0 0 -1 0 20 Unmodified _YAYDGKDYL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 29.84058131909904 0.1515068451768857 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GS{[CP]|[EA]}YAY{I|L} 10 6 + 60.468 0.0 0.0 5.4648 5.4648 73.093 0.0 0.0 0.0 10.29635038192984 32.269987279362624 10.29635038192984 1.7609125905568137 0 0.5 2.0 0.2614393726401688 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GS{[CP]|[EA]}YAY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GS{[CP]|[EA]}AYY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[TA]DYAY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[TA]DAYY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAYY{I|L};[KG]DDYYAY{I|L};[KG]DDYAYY{I|L};[VG][SG]DYYAY{I|L};[KG]DYDYAY{I|L} 5.4648;5.3057;5.0336;4.8745;4.8745;4.7153;4.4068;4.2476;4.0778;4.0311 -;-;-;-;-;-;-;-;-;- 3296 1 1.579 130950.8 1.0 5706 4653 10341 HBL1_DMSO_200M_050219_2,10361 HBL1_DMSO_200M_050219_2,10361,YAYDGKDYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10363 56.153 0.3 130710000.0 25 0 12839000.0 + 4014 DALRSGLTV 9 64 466.2639604463565 930.5133679595132 2 466.2645751833916 MULTI CID FTMS 0 0 0 10362 196958192.0 1.0 0 0.0 1 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 40.23920728925047 0.0741434193262949 4 {[DA]|[EG]}{I|L}R[SG]{I|L}TV 9 0 + 58.279 0.0 0.0 6.2631 6.2631 89.401 0.0 0.0 0.0 17.833552777739072 26.58416541165608 17.833552777739072 14.488474775526186 0 1.742992819099939 1.5228787452803376 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}R[SG]{I|L}TV;{[DA]|[EG]}{I|L}R[KT]EV;{[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[SA]|[TG]}[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 6.2631;4.706;4.2557;3.181 +;-;-;- + 80 1 1.547 35036.2 1.0 5707 4654 10362 HBL1_DMSO_200M_050219_2,10363 HBL1_DMSO_200M_050219_2,10363,DALRSGLTV True True DALRSGLTV 56.153239 466.264575183392 6712223360.0 10362.0 nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 6.702265580495198 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10364 56.154 15.0 2215400.0 25 0 241820.0 + 30620 RFIGAVNNM 9 58 511.26605365168825 1020.5175543701764 2 511.2662841677666 MULTI CID FTMS 0 0 0 10362 1501927.25 0.4470970327929706 1 -0.081024169921875 2 Unmodified _RFIGAVNNM_ ENSG00000165175|ENST00000614558|MID1IP1 10.823927491677226 0.5436922275383211 4 VNNM 4 5 22.435 0.0 0.0 2.1984 0.0 0.0 544.3141055221722 0.0 544.3141055221722 0.0 6.237125054200231 0.0 0.0 0 0.6237125054200235 0.0 0.0 0.0 + VNNM 2.1984 + + 45 1 1.547 31541.4 1.0 5708 4654 10362 HBL1_DMSO_200M_050219_2,10364 HBL1_DMSO_200M_050219_2,10364,RFIGAVNNM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10365 56.156 22.0 1642700.0 25 0 229490.0 + + -1 YPNTMVSSV 9 70 499.2366354834408 996.4587180336816 2 499.2366515994072 MULTI CID FTMS 0 0 0 10362 1792902.125 0.8985342017299356 -1 0.1193695068359375 3 Carbamidomethyl (C) _SLFC(Carbamidomethyl (C))GIDSV_ ENSG00000136738|ENST00000377524|STAM 23.1484247019978 0.2366544122328345 4 [NP]TMYWSV 8 -1 [NP]TMYW + + 20.355 23.416 2.9553 2.0428 2.0428 44.623 0.0 0.0 0.0 0.0 -5.094626283400025 -5.094626283400025 0.0 0 0.0 0.0 0.2396518287104437 0.0 [NP]TMYWSV 2.0428 - 188 + 1 1.547 33420.3 1.0 5709 4654 10362 HBL1_DMSO_200M_050219_2,10365 HBL1_DMSO_200M_050219_2,10365,SLFCGIDSV False False YPNTMVSSV 56.155598 499.236651599407 78526944.0 10362.0 ENSG00000136738|ENST00000377524|STAM 3.558235883712769 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10366 56.157 55.0 999910.0 25 0 100400.0 + 9957 FPGKHFQEI 9 80 551.7875691100098 1101.5605852868196 2 551.7877685427666 MULTI CID FTMS 0 0 0 10362 1224373.75 0.2614355970431777 33 -3.0361900329589844 4 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 32.89776655970281 0.1144444835665315 4 {I|L}MGK[NS]TQ 8 7 45.672 0.0 0.0 4.1461 0.0 0.0 0.0 239.1043947809204 239.1043947809204 6.765997036641593 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.0 {I|L}MGK[NS]TQ 4.1461 - 408 + 1 1.547 47765.0 1.0 5710 4654 10362 HBL1_DMSO_200M_050219_2,10366 HBL1_DMSO_200M_050219_2,10366,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10367 56.159 70.0 1080100.0 25 0 121320.0 + 20149 LKPGILPVPK 10 91 531.3577281216423 1060.7009033100844 2 531.3579589724541 MULTI CID FTMS 0 0 0 10362 1050938.5 0.1843946177482924 6 -0.6427803039550781 5 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 18.721224879955976 0.5334180411911432 4 K{I|L}A[{I|L}P]VKD{I|L} 9 -1 66.001 0.0 0.0 6.2224 0.0 0.0 0.0 80.05139337711171 80.05139337711171 44.62553365583586 0.0 0.0 0.0 0 2.2302046884880937 0.0 1.1382104921644451 0.0 K{I|L}A[{I|L}P]VKD{I|L} 6.2224 - 390 + 1 1.547 64943.7 1.0 5711 4654 10362 HBL1_DMSO_200M_050219_2,10367 HBL1_DMSO_200M_050219_2,10367,LKPGILPVPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10368 56.16 79.0 1235100.0 25 0 190150.0 + + 21001 IPNRIPKI 8 103 317.5433606586409 949.6082525761228 3 317.5430480837822 MULTI CID FTMS 0 0 0 10362 782249.5 1.0 0 0.0 6 Unmodified _LNRPLPKL_ nc|ENSG00000164323|Q9P2B7-2|CFAP97;ENSG00000164323|ENST00000458385|CFAP97 18.1463463914782 0.6428359029697936 4 {I|L}{I|L}K 3 -1 21.682 0.0 0.0 2.2833 0.0 0.0 0.0 592.3394259088499 592.3394259088499 2.252640521395076 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}K 2.2833 - 94 + 1 1.547 86707.6 1.0 5712 4654 10362 HBL1_DMSO_200M_050219_2,10368 HBL1_DMSO_200M_050219_2,10368,LNRPLPKL False False IPNRIPKI 56.160475 317.543048083782 28103626.0 10362.0 nc|ENSG00000164323|Q9P2B7-2|CFAP97;;ENSG00000164323|ENST00000458385|CFAP97 -0.3497386872768402 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10369 56.163 130.0 631790.0 25 0 35667.0 + 10741 FYHPETTQL 9 107 568.2744265489774 1134.5343001647548 2 568.2745239138603 MULTI CID FTMS 0 0 0 10362 559685.1875 0.6198239983277488 -1 0.1193695068359375 7 Unmodified _FYHPETTQL_ ENSG00000114416|ENST00000357559|FXR1;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1 44.40701690623563 0.0526327925666318 4 {[QN]|[E{I|L}]|[KN]}TCY{M(Oxidation (M))|F}TQ 8 7 31.097 0.0 0.0 2.741 0.0 0.0 0.0 146.08285908492977 146.08285908492977 13.345086344343247 0.0 0.0 0.0 0 0.0 0.0 1.2783773187068794 0.0 {[QN]|[E{I|L}]|[KN]}TCY{M(Oxidation (M))|F}TQ 2.741 - 1167 1 1.547 66441.9 1.0 5713 4654 10362 HBL1_DMSO_200M_050219_2,10369 HBL1_DMSO_200M_050219_2,10369,FYHPETTQL True True FYHPETTQL 56.163131 568.27452391386 7918577.0 10362.0 nc|ENSG00000114416|P51114-2|FXR1;;nc|ENSG00000114416|P51114-3|FXR1;;ENSG00000114416|ENST00000357559|FXR1 7.4495822588602705 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10370 56.17 393.0 456120.0 25 0 31102.0 43532 WWWWIWWQWW 10 125 874.9041028402406 1747.7936527472812 2 875.4035522341728 MULTI CID FTMS 0 0 0 10362 555742.6875 0.1909880751593929 14 -1.235443115234375 8 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 4 PYPD{I|L}NAD{[{M(Oxidation (M))|F}D]|MM}{[QG]|[NA]}R{I|L}Q 15 13 + 96.71 0.0 0.0 5.5333 5.5333 75.725 0.0 0.0 0.0 14.304461535987445 12.83809673312028 12.83809673312028 3.0102999566398125 0 0.8494850021680094 0.0 0.4247425010840047 1.4916440611282624 PYPD{I|L}NAD{[{M(Oxidation (M))|F}D]|MM}{[QG]|[NA]}R{I|L}Q;PYPD{I|L}NAD{[CA]|SS}{[WS]|[C(Carbamidomethyl (C)){I|L}]}R{I|L}Q;PYPD{I|L}NW{[{M(Oxidation (M))|F}D]|MM}{[QG]|[NA]}R{I|L}Q;PYPD{I|L}NACW{[WS]|[C(Carbamidomethyl (C)){I|L}]}[VG]{I|L}Q;PYPD{I|L}NAC{[DA]|[EG]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}R{I|L}Q;[NP]{I|L}N[H{I|L}]{[CA]|SS}DAN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[Y{I|L}]{[{M(Oxidation (M))|F}D]|MM}DAN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N[H{I|L}]{[DA]|[EG]}CAN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[Y{I|L}]{[{M(Oxidation (M))|F}D]|MM}WN{I|L}DP{[QN]|[E{I|L}]|[KN]};PYY{I|L}YAD{[{M(Oxidation (M))|F}D]|MM}{[QG]|[NA]}R{I|L}Q 5.5333;5.361;5.1505;4.971;4.971;4.6038;4.4148;4.2138;4.0321;3.9755 -;-;-;-;-;-;-;-;-;- 6874 + 1 1.547 122451.5 1.0 5714 4654 10362 HBL1_DMSO_200M_050219_2,10370 HBL1_DMSO_200M_050219_2,10370,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 10371 56.174 222.0 579220.0 25 0 68977.0 + 2963 AVIDSQNFL 9 144 503.7622799621079 1005.510006991016 2 503.7621948122978 MULTI CID FTMS 0 0 0 10362 299781.84375 0.6910927449237418 2 -0.1799659729003906 9 Unmodified _AVIDSQNFL_ REV__ENSG00000084674|ENST00000233242|APOB 36.12702656103203 0.0967173616627612 4 {[VA]|[{I|L}G]}{I|L} 3 -1 32.932 0.0 0.0 3.2751 0.0 0.0 0.0 719.2962368096283 719.2962368096283 7.782031486036487 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L} 3.2751 + + 2219 1 1.547 100496.7 1.0 5715 4654 10362 HBL1_DMSO_200M_050219_2,10371 HBL1_DMSO_200M_050219_2,10371,AVIDSQNFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10372 56.183 486.0 208700.0 25 0 14483.0 + -1 AQLDNYGQQEL 11 114 640.3128320506203 1917.9166667520608 3 640.3154785037041 MULTI CID FTMS 0 0 0 10362 288573.34375 1.0 0 0.0 10 nc|ENSG00000106105|P41250-2|GARS1;ENSG00000106105|ENST00000389266|GARS1;ENST00000478124.5_1_7:30634537-30662079:+|nuORF 4 {[DA]|[EG]}V{I|L}H 5 -1 46.198 0.0 0.0 2.4088 0.0 0.0 0.0 1379.6127997643546 1379.6127997643546 21.94537812595911 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V{I|L}H 2.4088 - 510 + 1 1.547 82822.8 1.0 5716 4654 10362 HBL1_DMSO_200M_050219_2,10372 HBL1_DMSO_200M_050219_2,10372, False False AQLDNYGQQEL 56.18297 640.315478503704 991213.0625 10362.0 nc|ENSG00000106105|P41250-2|GARS1;;ENSG00000106105|ENST00000389266|GARS1;;ENST00000478124.5_1_7:30634537-30662079:+|nuORF 1.6532955169677734 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10373 56.194 619.0 444100.0 25 0 86891.0 + 15469 IPRQSLRLV 9 185 361.23303521967983 1080.6772762592395 3 361.2329894900322 MULTI CID FTMS 0 0 0 10362 249446.5 1.0 0 0.0 11 Unmodified _IPRQSLRLV_ ENSG00000136573|ENST00000259089|BLK 30.7034409873982 0.1405282614900322 4 {I|L}PRQS{I|L}R{I|L}V 9 0 + 43.038 0.0 0.0 3.9825 3.9825 68.909 0.0 0.0 0.0 13.662492405957856 2.787536009528281 2.787536009528281 2.787536009528281 0 0.6292816040978115 0.2924298239020636 0.0 0.75 + + {I|L}PRQS{I|L}R{I|L}V;{I|L}PRQS{I|L}RV{I|L};{I|L}PR[AG]S{I|L}R{I|L}V;{I|L}PR[AG]S{I|L}RV{I|L} 3.9825;3.7246;3.1305;2.8725 +;-;-;- + 164 + 1 1.547 223258.0 1.0 5717 4654 10362 HBL1_DMSO_200M_050219_2,10373 HBL1_DMSO_200M_050219_2,10373,IPRQSLRLV False True IPRQSLRLV 56.193771 361.232989490032 2672551.0 10362.0 ENSG00000136573|ENST00000259089|BLK 6.308085282643636 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10374 56.205 627.0 169070.0 25 0 28721.0 -1 0 53 1099.788506834488 3296.343691103664 3 1100.120288074017 MULTI CID FTMS 0 0 0 10362 255470.109375 0.6581155968460853 2 -0.1799659729003906 12 4 T 1 -1 8.9794 0.0 0.0 0.2724 0.0 0.0 2498.9472514244594 693.3222822942766 3192.269533718736 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 T 0.2724 - 64 + 1 1.547 87686.5 1.0 5718 4654 10362 HBL1_DMSO_200M_050219_2,10374 HBL1_DMSO_200M_050219_2,10374, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10375 56.214 516.0 158430.0 25 0 14676.0 + -1 QYKSCHNEFSL 11 119 706.8173423448959 0 706.8162109255791 PEAK CID FTMS 0 0 0 10362 230654.953125 1.0 0 0.0 13 Carbamidomethyl (C) _QYKSC(Carbamidomethyl (C))HNEFSL_ REV__ENSG00000101333|ENST00000378473|PLCB4;REV__ENST00000464199.5_1_20:9351789-9459633:+|nuORF;REV__ENST00000492632.5_1_20:9288449-9449247:+|nuORF;REV__nc|ENSG00000101333|Q15147-2|PLCB4;REV__nc|ENSG00000101333|Q15147-4|PLCB4;REV__nc|ENSG00000101333|Q15147-5|PLCB4;REV__nc|ENSG00000101333|Q15147|PLCB4 7.608950283845883 0.472344094183283 4 VSSVE{M(Oxidation (M))|F}MT 8 -1 37.165 0.0 0.0 2.6328 0.0 0.0 320.15884275985746 208.0734499567016 528.2322927165591 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6861818737241734 0.0 VSSVE{M(Oxidation (M))|F}MT 2.6328 - 867 + 1 1.547 63144.0 1.0 5719 4654 10362 HBL1_DMSO_200M_050219_2,10375 HBL1_DMSO_200M_050219_2,10375,QYKSCHNEFSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10376 56.217 159.0 229560.0 25 0 25507.0 -1 0 71 686.979444748032 2057.916504844296 3 687.3159057497978 MULTI CID FTMS 0 0 0 10362 212593.59375 0.588717947386594 -1 0.1193695068359375 14 4 [YQ]{I|L} 3 -1 25.915 0.0 0.0 1.2593 0.0 0.0 0.0 1650.6945683005647 1650.6945683005647 5.737862141609188 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.0 0.0 [YQ]{I|L} 1.2593 - 148 + 1 1.547 39858.3 1.0 5720 4654 10362 HBL1_DMSO_200M_050219_2,10376 HBL1_DMSO_200M_050219_2,10376, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10377 56.23 684.0 126120.0 25 0 18324.0 -1 0 57 1102.7976283903058 3305.3710557711174 3 1102.794970691204 MULTI CID FTMS 0 0 0 10362 198401.140625 0.9255190872272088 1 -0.081024169921875 15 4 EP 2 -1 6.4537 0.0 0.0 0.19525 0.0 0.0 2221.828441502046 854.4165743463499 3076.245015848396 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EP 0.19525 - 30 + 1 1.547 68291.4 1.0 5721 4654 10362 HBL1_DMSO_200M_050219_2,10377 HBL1_DMSO_200M_050219_2,10377, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10379 56.234 19.0 3261200.0 25 0 321840.0 + 44671 YPFKPPKV 8 65 488.2868778785377 974.5592028238756 2 488.2868224978447 MULTI CID FTMS 0 0 0 10378 2962243.5 0.0974181863027213 -20 1.9466705322265625 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 42.09456458481378 0.1992492688217789 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 65.136 0.0 0.0 6.6836 6.6836 93.406 0.0 0.0 0.0 44.845500650402826 5.583362792012011 5.583362792012011 48.64761306751889 0 0.7614393726401688 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6.6836;1.6919 +;- + 142 + 1 1.547 51748.8 1.0 5722 4655 10378 HBL1_DMSO_200M_050219_2,10379 HBL1_DMSO_200M_050219_2,10379,YPFKPPKV False True YPFKPPKV 56.23426 488.286822497845 26838568448.0 10378.0 nc|ENSG00000109332|P61077-3|UBE2D3;;ENSG00000182247|ENST00000396703|UBE2E2;;nc|ENSG00000170142|P51965-3|UBE2E1;;ENSG00000078967|ENST00000222402|UBE2D4;;nc|ENSG00000170142|P51965-2|UBE2E1;;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;;nc|ENSG00000131508|P62837-2|UBE2D2;;ENSG00000170142|ENST00000306627|UBE2E1;;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;;ENSG00000170035|ENST00000410062|UBE2E3;;ENSG00000131508|ENST00000398733|UBE2D2;;nc|ENSG00000109332|P61077-2|UBE2D3;;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;;ENSG00000109332|ENST00000453744|UBE2D3;;ENST00000493707.1_1_3:23907959-23932094:+|nuORF 7.793030103047688 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10380 56.236 53.0 1027000.0 25 0 164820.0 + 5811 DPPYSRVI 8 68 473.7532292149006 945.4919054966012 2 473.7526733279228 MULTI CID FTMS 0 0 0 10378 1032198.1875 0.4049725504281851 7 -0.757904052734375 2 Unmodified _DPPYSRVI_ ENSG00000198961|ENST00000361189|PJA2;nc|ENSG00000198961|O43164-2|PJA2 22.736283301280096 0.5659792798204337 4 DPPY 4 4 61.186 0.0 0.0 6.4713 0.0 0.0 0.0 470.2697847955688 470.2697847955688 48.96713777483761 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + DPPY 6.4713 + + 51 + 1 1.547 49922.6 1.0 5723 4655 10378 HBL1_DMSO_200M_050219_2,10380 HBL1_DMSO_200M_050219_2,10380,DPPYSRVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10381 56.237 39.0 1784100.0 25 0 264220.0 + 4406 DAVRIVHI 8 83 461.7773070204923 921.5400611077846 2 461.7776672244072 MULTI CID FTMS 0 0 0 10378 1514330.0 0.3426171239555735 -2 0.2003936767578125 3 Unmodified _DAVRIVHI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-5|BRCC3;nc|ENSG00000185515|P46736|BRCC3 29.84058131909904 0.4163871034372953 4 {[DA]|[EG]}[RV]{I|L}VH{I|L} 8 0 + 60.793 0.0 0.0 6.5969 6.5969 92.574 0.0 0.0 0.0 17.715299873086607 48.31907991397158 17.715299873086607 33.196194859097886 0 1.5387254899964358 1.0 0.0 0.0 + + {[DA]|[EG]}[RV]{I|L}VH{I|L};{[DA]|[EG]}[RV]{I|L}V{I|L}H 6.5969;2.9947 +;- + 42 1 1.547 59382.9 1.0 5724 4655 10378 HBL1_DMSO_200M_050219_2,10381 HBL1_DMSO_200M_050219_2,10381,DAVRIVHI False True DAVRIVHI 56.236805 461.777667224407 35600180.0 10378.0 nc|ENSG00000185515|P46736-3|BRCC3;;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;;ENSG00000185515|ENST00000330045|BRCC3;;nc|ENSG00000185515|P46736|BRCC3;;nc|ENSG00000185515|P46736-5|BRCC3 2.4428877035776773 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10382 56.239 117.0 1162600.0 25 0 87330.0 21846 LPPCCPPRS 9 106 485.2373771265082 968.4602013198164 2 485.2373840212822 MULTI CID FTMS 0 0 0 10378 773807.375 0.9599934929983436 2 -0.2352180480957031 4 Unmodified _LPPCCPPRS_ nc|ENSG00000159069|Q969U6-2|FBXW5 7.910154910731844 0.6385446671287552 4 [PA]N 3 8 18.416 0.0 0.0 1.9016 0.0 0.0 0.0 683.2987382673351 683.2987382673351 2.218487496163565 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [PA]N 1.9016 - 300 1 1.547 110957.0 1.0 5725 4655 10378 HBL1_DMSO_200M_050219_2,10382 HBL1_DMSO_200M_050219_2,10382,LPPCCPPRS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10383 56.242 131.0 869900.0 25 0 184970.0 + 43688 YAYDGKDYL 9 96 554.2533874371126 1106.492221941025 2 554.2546264529228 MULTI CID FTMS 0 0 0 10378 781009.125 0.1654183218454369 -2 0.2003936767578125 5 Unmodified _YAYDGKDYL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 60.07390631473393 0.0260411565414776 4 YAY[{M(Oxidation (M))|F}V]YDG 8 5 74.646 0.0 0.0 6.7462 0.0 0.0 0.0 125.07251917056875 125.07251917056875 34.1005558229044 0.0 0.0 0.0 0 0.805462187404089 2.0 1.385151878060192 0.0 YAY[{M(Oxidation (M))|F}V]YDG 6.7462 - 1211 + 1 1.547 87794.2 1.0 5726 4655 10378 HBL1_DMSO_200M_050219_2,10383 HBL1_DMSO_200M_050219_2,10383,YAYDGKDYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10384 56.244 97.0 880960.0 25 0 63144.0 + 32010 RVIDREGVYEI 11 68 450.2454976513129 1347.7146635541387 3 450.2458679080009 MULTI CID FTMS 0 0 0 10378 741370.6875 0.6146295428677843 1 -0.0989418029785156 6 Unmodified _RVIDREGVYEI_ ENSG00000166199|ENST00000302708|ALKBH3;ENST00000533200.5_1_11:43904193-43919192:+|nuORF 16.565877749689598 0.6905575015977202 4 VYE{I|L} 4 7 36.938 0.0 0.0 2.7408 0.0 0.0 825.4468290355708 0.0 825.4468290355708 0.0 25.96910013008056 0.0 0.0 0 0.5 0.0 0.0 0.0 + VYE{I|L} 2.7408 + + 87 1 1.547 77328.3 1.0 5727 4655 10378 HBL1_DMSO_200M_050219_2,10384 HBL1_DMSO_200M_050219_2,10384,RVIDREGVYEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10385 56.246 118.0 624960.0 25 0 50323.0 + 30811 RIIDTVAQV 9 101 507.8005772667989 1013.586601600398 2 507.8006469607353 MULTI CID FTMS 0 0 0 10378 631741.875 0.3610828681551178 2 -0.2352180480957031 7 Unmodified _RIIDTVAQV_ ENSG00000102699|ENST00000381989|PARP4 29.84058131909904 0.1515068451768857 4 {I|L}{I|L}RDTVAQV 9 2 + 61.746 0.0 0.0 6.0918 6.0918 86.032 0.0 0.0 0.0 13.297541469258752 47.14188238406269 13.297541469258752 9.208187539523747 0 0.3054621874040891 1.3979400086720375 0.4247425010840047 0.0 {I|L}{I|L}RDTVAQV;{I|L}{I|L}RDTVA[AG]V;{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}RVAQV;[AG]V[KS][VG]VAQV;{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}RVA[AG]V;[W{I|L}]VVTVAQV;{[QV]|[N{I|L}]|[RA]|[KV]}[KS][VG]VAQV;[W{I|L}]VVTVA[AG]V;{I|L}{I|L}RDR[WR] 6.0918;5.1834;4.8359;4.0347;3.9274;3.8661;3.3502;2.9576;1.953 -;-;-;-;-;-;-;-;- 194 1 1.547 63350.1 1.0 5728 4655 10378 HBL1_DMSO_200M_050219_2,10385 HBL1_DMSO_200M_050219_2,10385,RIIDTVAQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10386 56.252 328.0 952330.0 25 0 43725.0 + 23371 LTDMYISL 8 159 478.2422881615076 954.4700233898152 2 478.2426940798759 MULTI CID FTMS 0 0 0 10378 643007.75 0.8821901100203344 1 -0.0989418029785156 8 Unmodified _LTDMYISL_ REV__ENSG00000165678|ENST00000372134|GHITM 24.67388899826682 0.525179942228231 4 {[QN]|[E{I|L}]|[KN]}[WH]{I|L}CV 7 -1 22.483 0.0 0.0 2.3556 0.0 0.0 0.0 71.01078861720808 71.01078861720808 -0.881737492920017 0.0 -0.881737492920017 0.0 0 0.0 0.8860566476931632 1.16944517631652 0.0 {[QN]|[E{I|L}]|[KN]}[WH]{I|L}CV 2.3556 - 2950 1 1.547 235859.2 1.0 5729 4655 10378 HBL1_DMSO_200M_050219_2,10386 HBL1_DMSO_200M_050219_2,10386,LTDMYISL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10387 56.259 393.0 1101000.0 25 0 211400.0 + 11073 GECGGVGM 8 191 355.13655876106606 0 355.0696899294853 PEAK CID FTMS 0 0 0 10378 202196.234375 0.2526982476621735 -12 1.0951614379882812 9 Unmodified _GECGGVGM_ REV__ENST00000492902.2_1_10:104179843-104180653:-|nuORF 2.889219685676258 0.5898224805723975 4 A 1 -1 2.4743 0.0 0.0 0.34934 0.0 0.0 518.14738707604 116.05121027164296 634.198597347683 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.34934 - 7 + 1 1.547 339459.2 1.0 5730 4655 10378 HBL1_DMSO_200M_050219_2,10387 HBL1_DMSO_200M_050219_2,10387,GECGGVGM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10388 56.266 361.0 505210.0 25 0 113300.0 30780 RIDVFLWASEL 11 111 674.8638999012027 1347.7132468692052 2 674.8643066287041 MULTI CID FTMS 0 0 0 10378 536015.375 0.6885734766150262 1 -0.0989418029785156 10 Unmodified _RIDVFLWASEL_ ENST00000602547.1_1_12:6994092-6994545:+|nuORF 13.614867670302877 0.751941774060705 4 [VG]V[HS]PTGAR[PA]S{I|L} 14 12 + 42.581 0.0 0.0 3.1595 3.1595 65.196 0.0 0.0 0.0 21.3832142850967 2.139107961803859 2.139107961803859 1.896640662449549 0 0.2742275032520141 1.6989700043360187 0.0 0.3252574989159953 [VG]V[HS]PTGAR[PA]S{I|L};[VG]V[HS]PTQR[PA]S{I|L};[VG][WH]PTGAR[PA]S{I|L};{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]TGAR[PA]S{I|L};[VG][WH]PTQR[PA]S{I|L};{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]TQR[PA]S{I|L};[VG]V[HS]PTGAR[PA]TV;[VG]V[HS]PTQR[PA]TV;[VG][WH]PTGAR[PA]TV;{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]TGAR[PA]TV 3.1595;3.0188;2.8881;2.861;2.7493;2.7244;2.7128;2.5721;2.4414;2.4143 -;-;-;-;-;-;-;-;-;- 1035 + 1 1.547 136254.2 1.0 5731 4655 10378 HBL1_DMSO_200M_050219_2,10388 HBL1_DMSO_200M_050219_2,10388,RIDVFLWASEL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10389 56.269 133.0 1109200.0 25 0 82359.0 + 4408 DAVRIVHI 8 133 308.1872087171639 921.5397967516916 3 308.1870605349541 MULTI CID FTMS 0 0 0 10378 542369.8125 0.3902765521241852 -2 0.2003936767578125 11 Unmodified _DAVRIVHI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-5|BRCC3;nc|ENSG00000185515|P46736|BRCC3 32.30548876998284 0.3644845974844379 4 DAVR{I|L}VH{I|L} 8 0 + 58.855 0.0 0.0 6.3866 6.3866 84.498 0.0 0.0 0.0 29.719712763997563 7.132104434506289 7.132104434506289 7.132104434506289 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + + DAVR{I|L}VH{I|L};DAVR{I|L}V{I|L}H;D{I|L}GR{I|L}VH{I|L};WV[VG]{I|L}VH{I|L};D{I|L}GR{I|L}V{I|L}H;WV[VG]{I|L}V{I|L}H 6.3866;5.6127;3.4316;3.1616;2.6576;2.3877 +;-;-;-;-;- + 198 + 1 1.547 118776.4 1.0 5732 4655 10378 HBL1_DMSO_200M_050219_2,10389 HBL1_DMSO_200M_050219_2,10389,DAVRIVHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10390 56.271 81.0 717040.0 25 0 67297.0 + 22054 LPPPPPPHL 9 76 482.78449894353474 963.5544449538696 2 482.7842285037041 MULTI CID FTMS 0 0 0 10378 362286.09375 0.1876799634623905 15 -1.2385749816894531 12 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 56.04830969593885 0.0282699710924866 4 {I|L}PPPPPPH{I|L} 9 0 + 85.06 0.0 0.0 8.8277 8.8277 96.996 0.0 0.0 0.0 70.45064523645054 14.09256854528806 14.09256854528806 22.21848749616356 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPPPPPH{I|L};{I|L}PPP[YK]H{I|L};{I|L}PP[YK]PH{I|L};{I|L}P[YK]PPH{I|L};{I|L}PPP[RN]TG{I|L};{I|L}PPP[RN]TAV;{I|L}[YK]PPPH{I|L};{I|L}[YK][YK]H{I|L};{I|L}[YK][RN]TG{I|L};{I|L}[YK][RN]TAV 8.8277;6.5218;6.5218;6.5218;6.339;6.0266;4.0053;1.7066;1.5167;1.2043 +;-;-;-;-;-;-;-;-;- + 159 + 1 1.547 49608.7 1.0 5733 4655 10378 HBL1_DMSO_200M_050219_2,10390 HBL1_DMSO_200M_050219_2,10390,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10391 56.272 85.0 740700.0 25 0 85007.0 + 39344 VAFSVQKEV 9 106 503.7823389383548 1005.5501249435096 2 503.7823364138603 MULTI CID FTMS 0 0 0 10378 267216.53125 0.7030339071357753 -1 0.081024169921875 13 Unmodified _VAFSVQKEV_ ENSG00000140379|ENST00000267953|BCL2A1;nc|ENSG00000140379|Q16548-2|BCL2A1 32.30548876998284 0.1201446275138228 4 {NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VT{I|L} 7 6 26.616 0.0 0.0 2.6469 0.0 0.0 0.0 167.12063843677507 167.12063843677507 2.144104213048617 0.0 0.0 0.0 0 0.1421590589602531 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VT{I|L} 2.6469 - 278 1 1.547 50890.4 1.0 5734 4655 10378 HBL1_DMSO_200M_050219_2,10391 HBL1_DMSO_200M_050219_2,10391,VAFSVQKEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10392 56.281 498.0 234570.0 25 0 40707.0 + 45864 YYQQYQNYY 9 124 666.780272409925 1331.54599188665 2 667.2823364138603 MULTI CID FTMS 0 0 0 10378 242285.578125 0.8602559529192203 -1 0.081024169921875 14 Unmodified _YYQQYQNYY_ ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28887839-28904145:+|nuORF;nc|ENSG00000180098|Q9NX07-2|TRNAU1AP 50.855029805455786 0.0384952370514206 4 YYQQYQNYY 9 0 + 56.973 0.0 0.0 4.2787 4.2787 72.782 0.0 0.0 0.0 4.259687322722812 4.137342758552691 4.137342758552691 4.259687322722812 0 0.3807196863200844 2.0 0.0 0.7302046884880937 + + YYQQYQNYY;[AG]YYQYQNYY;[AG]QYYYQNYY;[AG]YQYYQNYY;YYQQYQGGYY;YY[AG]QYQNYY;YYQ[AG]YQNYY;YYQQY[AG]NYY;[YQ]YQYQNYY;[AG]YYQY[AG]NYY 4.2787;3.9588;3.9559;3.9195;3.5872;3.5872;3.5872;3.5872;3.2719;3.2705 +;-;-;-;-;-;-;-;-;- + 2099 1 1.547 88111.2 1.0 5735 4655 10378 HBL1_DMSO_200M_050219_2,10392 HBL1_DMSO_200M_050219_2,10392,YYQQYQNYY True True YYQQYQNYY 56.28123 667.28233641386 3332634.75 10378.0 nc|ENSG00000180098|Q9NX07-2|TRNAU1AP;;ENST00000491577.5_1_1:28887839-28904145:+|nuORF;;ENSG00000180098|ENST00000373830|TRNAU1AP;;ENST00000484775.1_1_1:28887181-28904036:+|nuORF 6.693744977315267 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10393 56.291 507.0 328470.0 25 0 74253.0 + 32131 RVPDRLEEL 9 142 563.8145095545805 1125.6144661759608 2 563.8146850466728 MULTI CID FTMS 0 0 0 10378 213960.25 0.7197980070044059 -1 0.081024169921875 15 Unmodified _RVPDRLEEL_ ENSG00000109618|ENST00000382103|SEPSECS;nc|ENSG00000109618|Q9HD40-3|SEPSECS 28.49450938151212 0.1686335738423394 4 RV[DP]{I|L} 5 4 33.522 0.0 0.0 2.9781 0.0 0.0 0.0 542.2625216119749 542.2625216119749 13.75930806161078 0.0 0.0 0.0 0 1.0501648626366045 0.9208187539523752 0.0 0.0 RV[DP]{I|L} 2.9781 - 679 + 1 1.547 131238.5 1.0 5736 4655 10378 HBL1_DMSO_200M_050219_2,10393 HBL1_DMSO_200M_050219_2,10393,RVPDRLEEL False True RVPDRLEEL 56.291347 563.814685046673 3002049.5 10378.0 nc|ENSG00000109618|Q9HD40-3|SEPSECS;;ENSG00000109618|ENST00000382103|SEPSECS 5.01369031270345 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10394 56.303 676.0 193230.0 25 0 22458.0 + 29652 QNLEPSQPNSR 11 118 635.3117553591728 0 635.3117553591728 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _QNLEPSQPNSR_ REV__ENST00000437397.5_1_14:94854902-94857012:-|nuORF 12.240655878213236 0.4295705806160874 4 D{I|L}Q 3 -1 16.036 0.0 0.0 1.264 0.0 0.0 798.3940052478393 111.02054773502186 909.4145529828612 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.0629529932484498 D{I|L}Q 1.264 - 59 + 1 1.547 100261.3 1.0 5737 4655 10378 HBL1_DMSO_200M_050219_2,10394 HBL1_DMSO_200M_050219_2,10394,QNLEPSQPNSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10395 56.317 800.0 49382.0 25 0 10569.0 -1 0 38 1146.787524402142 0 1146.787524402142 PEAK CID FTMS 0 0 0 -1 0 17 4 C 1 -1 6.9897 0.0 0.0 0.30502 0.0 0.0 1926.427086302528 259.1097506158813 2185.5368369184093 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.30502 - 2 + 1 1.547 34532.7 0.8799999952316284 5738 4655 10378 HBL1_DMSO_200M_050219_2,10395 HBL1_DMSO_200M_050219_2,10395, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10396 56.329 689.0 87068.0 25 0 2566.0 -1 TVMGHRQNRPF 11 113 679.8438111694551 0 679.8440429568291 PEAK CID FTMS 0 0 0 10378 144400.078125 1.0 0 0.0 18 Oxidation (M) _TVM(Oxidation (M))GHRQNRPF_ ENSG00000132464|ENST00000396073|ENAM 21.53697664764585 0.3337597044351383 4 VNTSQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}R 8 -1 44.705 0.0 0.0 3.2927 0.0 0.0 131.09296765495247 281.0903414361938 412.1833090911463 0.0 0.0 0.0 0.0 0 0.5709991640913001 0.0 1.9291746928241125 0.2614393726401688 VNTSQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}R 3.2927 - 371 + 1 1.547 48883.3 1.0 5739 4655 10378 HBL1_DMSO_200M_050219_2,10396 HBL1_DMSO_200M_050219_2,10396,TVMGHRQNRPF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10398 56.333 6.4 6119800.0 25 0 646910.0 + 19703 LGLTNQPEL 9 63 492.7714541632418 983.5283553932836 2 492.7717773318291 MULTI CID FTMS 0 0 0 10397 7705433.0 0.3846008292336507 3 -0.3339881896972656 1 Unmodified _LGLTNQPEL_ ENSG00000179626|ENST00000641569|OR6C4 34.10243960390752 0.1078313939113124 4 {[VA]|[{I|L}G]}{I|L}{[QS]|[NT]}Q 6 3 26.36 0.0 0.0 2.6802 0.0 0.0 0.0 354.16736841502114 354.16736841502114 2.4595372608497 0.0 0.0 0.0 0 0.5 2.0 0.0 0.4247425010840047 + {[VA]|[{I|L}G]}{I|L}{[QS]|[NT]}Q 2.6802 + + 171 1 1.54 36041.2 1.0 5740 4656 10397 HBL1_DMSO_200M_050219_2,10398 HBL1_DMSO_200M_050219_2,10398,LGLTNQPEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10399 56.334 7.8 8844100.0 25 0 1603500.0 + 44661 YPFKPPKV 8 80 325.86056900573425 974.5598776174028 3 325.8602172732353 MULTI CID FTMS 0 0 0 10397 5940720.0 0.0920654586042968 -19 1.8120269775390625 2 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 50.642 0.0 0.0 5.1964 5.1964 87.11 0.0 0.0 0.0 24.89124212414051 5.828956512079344 5.828956512079344 36.01519871977306 0 0.2742275032520141 0.958607314841775 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T][KP]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.1964;1.5008;1.0912;0.72987 +;-;-;- + 215 + 1 1.54 60943.1 1.0 5741 4656 10397 HBL1_DMSO_200M_050219_2,10399 HBL1_DMSO_200M_050219_2,10399,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10400 56.336 13.0 3931200.0 25 0 447550.0 + 4602 DAYTHPQFV 9 79 539.2534588118743 1076.4923646905486 2 539.2538940310478 MULTI CID FTMS 0 0 0 10397 4628513.0 1.0 0 0.0 3 Unmodified _DAYTHPQFV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 60.07390631473393 0.0260411565414776 4 {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F}V 9 0 + 64.076 0.0 0.0 5.9523 5.9523 86.187 0.0 0.0 0.0 0.8534811358448735 0.8534811358448735 0.8534811358448735 9.247425010840049 0 2.274227503252014 2.0 0.7742275032520141 0.0 + + {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F}V;{[DA]|[EG]}Y[YG]{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}V;{[DA]|[EG]}Y[HT][VS]WV;{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}[QP]W{M(Oxidation (M))|F}V;{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}[QP]{M(Oxidation (M))|F}WV;[R{M(Oxidation (M))|F}][WD][HA]{M(Oxidation (M))|F}V 5.9523;5.0932;4.7898;3.8013;2.6388;1.194 +;-;-;-;-;- + 117 1 1.54 44424.3 1.0 5742 4656 10397 HBL1_DMSO_200M_050219_2,10400 HBL1_DMSO_200M_050219_2,10400,DAYTHPQFV True True DAYTHPQFV 56.335563 539.253894031048 128079180.0 10397.0 ENST00000444025.1_1_7:23602199-23602811:-|nuORF;;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;;ENST00000515678.5_1_4:146042303-146044753:+|nuORF;;ENSG00000164163|ENST00000296577|ABCE1 11.50403118133545 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10401 56.337 15.0 3511600.0 25 0 811850.0 + 43816 YFDEHYEY 8 70 583.2273825919044 1164.4402122506087 2 583.2275878787041 MULTI CID FTMS 0 0 0 10397 3669579.25 0.6226523569160684 1 -0.1362762451171875 4 Unmodified _YFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 28.486842064014134 0.4448922141344407 4 Y{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}D[{M(Oxidation (M))|F}T]Y 8 5 + 53.863 0.0 0.0 4.6256 4.6256 83.66 0.0 0.0 0.0 29.42085350219358 2.6021314145189223 2.6021314145189223 20.74031267727719 0 0.3252574989159953 0.0 0.8494850021680094 0.0 Y{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}D[{M(Oxidation (M))|F}T]Y;Y{M(Oxidation (M))|F}D[Y{M(Oxidation (M))|F}][{M(Oxidation (M))|F}T]Y 4.6256;2.8445 -;- 305 + 1 1.54 45421.9 1.0 5743 4656 10397 HBL1_DMSO_200M_050219_2,10401 HBL1_DMSO_200M_050219_2,10401,YFDEHYEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10402 56.338 37.0 1684200.0 25 0 368020.0 + 9946 FPGKHFQEI 9 81 368.19447723393614 1101.5616023020084 3 368.1942321658134 MULTI CID FTMS 0 0 0 10397 1459212.875 0.1513085214917486 35 -3.307506561279297 5 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 17.11289562659939 0.3734572693229295 4 EP{I|L}{M(Oxidation (M))|F} 4 7 31.23 0.0 0.0 2.8351 0.0 0.0 597.3040638654312 0.0 597.3040638654312 0.0 16.625853418640375 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 EP{I|L}{M(Oxidation (M))|F} 2.8351 - 118 1 1.54 55048.5 1.0 5744 4656 10397 HBL1_DMSO_200M_050219_2,10402 HBL1_DMSO_200M_050219_2,10402,FPGKHFQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10403 56.339 23.0 1538600.0 25 0 112790.0 + 31127 RLMNDMTAV 9 75 525.7578880377185 1049.501223142237 2 525.7576171755791 MULTI CID FTMS 0 0 0 10397 1387188.25 1.0 0 0.0 6 Unmodified _RLMNDMTAV_ ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1 26.268140514670165 0.1969607489560049 4 [TA][WR]DMTAV 9 4 + 40.34 0.0 0.0 3.8437 3.8437 81.761 0.0 0.0 0.0 1.4511996594528398 24.855312426617573 1.4511996594528398 32.74227503252014 0 0.5 0.8239087409443188 0.4247425010840047 0.0 [TA][WR]DMTAV;[SG][Y{I|L}]Y[VS]YV;[SG][Y{I|L}][WY]YV 3.8437;0.72392;0.68032 -;-;- 136 1 1.54 34961.8 1.0 5745 4656 10397 HBL1_DMSO_200M_050219_2,10403 HBL1_DMSO_200M_050219_2,10403,RLMNDMTAV False True RLMNDMTAV 56.339099 525.757617175579 11998383.0 10397.0 nc|ENSG00000120694|Q92598-4|HSPH1;;nc|ENSG00000120694|Q92598-2|HSPH1;;ENSG00000120694|ENST00000320027|HSPH1;;nc|ENSG00000120694|Q92598-3|HSPH1 6.213079611460368 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10404 56.341 81.0 1178600.0 25 0 272080.0 + 5079 DGYFGGARV 9 88 471.2274004870552 940.4402480409104 2 471.2271606326103 MULTI CID FTMS 0 0 0 10397 797141.4375 0.2855835241811754 -2 0.1799659729003906 7 Unmodified _DGYFGGARV_ ENSG00000044446|ENST00000379942|PHKA2;ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1 14.838274106304384 0.4350285940865338 4 [DG]Y 3 6 17.007 0.0 0.0 1.8084 0.0 0.0 0.0 602.3050606231947 602.3050606231947 3.5117444837840885 0.0 0.0 0.0 0 0.5 1.0 0.0 0.0 + [DG]Y 1.8084 + + 94 1 1.54 78741.3 1.0 5746 4656 10397 HBL1_DMSO_200M_050219_2,10404 HBL1_DMSO_200M_050219_2,10404,DGYFGGARV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10405 56.344 150.0 502630.0 25 0 37236.0 + 35752 SVIEQGGIQTV 11 96 565.8060903228255 1129.597627712451 2 565.8065673708916 MULTI CID FTMS 0 0 0 10397 596344.0 0.5868869044221416 -1 0.0989418029785156 8 Unmodified _SVIEQGGIQTV_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000562423.5_1_15:29046609-29050027:+|nuORF;ENST00000566321.5_1_15:29046634-29050027:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 59.36838082759317 0.0717085717264091 4 {[TV]|[{I|L}S]}QQVD{I|L} 7 7 41.94 0.0 0.0 3.7128 0.0 0.0 0.0 343.1602247185635 343.1602247185635 5.636626865159848 0.0 0.0 0.0 0 0.2396518287104437 1.0969100130080565 1.2614393726401687 0.5994850021680094 {[TV]|[{I|L}S]}QQVD{I|L} 3.7128 - 1755 1 1.54 65385.6 1.0 5747 4656 10397 HBL1_DMSO_200M_050219_2,10405 HBL1_DMSO_200M_050219_2,10405,SVIEQGGIQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10406 56.346 101.0 750690.0 25 0 61040.0 + -1 MLSHIINGAL 10 94 542.7934218667502 1083.5722908003004 2 542.7917968630791 MULTI CID FTMS 0 0 0 10397 431603.3125 0.0233002356188551 44 -4.1473236083984375 9 Oxidation (M) _M(Oxidation (M))LSHIINGAL_ REV__ENSG00000184564|ENST00000647374|SLITRK6 18.1463463914782 0.5430639438673815 4 YPSS 4 -1 51.23 0.0 0.0 4.7279 0.0 0.0 0.0 646.3687227838499 646.3687227838499 39.01145969223869 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 YPSS 4.7279 - 66 + 1 1.54 65631.8 1.0 5748 4656 10397 HBL1_DMSO_200M_050219_2,10406 HBL1_DMSO_200M_050219_2,10406,MLSHIINGAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10407 56.35 185.0 484350.0 25 0 68129.0 + 17553 KPPHVILV 8 103 451.7947820260084 901.5750111188167 2 451.7951232790947 MULTI CID FTMS 0 0 0 10397 390197.84375 0.8338711122942041 1 -0.1362762451171875 10 Unmodified _KPPHVILV_ ENSG00000119203|ENST00000238112|CPSF3 46.92087301778293 0.1537303740847981 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PKV{I|L}{I|L}V 8 2 + 60.482 0.0 0.0 6.7085 6.7085 83.333 0.0 0.0 0.0 5.484550065040281 34.363044005075736 5.484550065040281 4.815534464597704 0 0.8252574989159953 0.0 0.0 1.0114393726401687 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PKV{I|L}{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPK{I|L}{I|L}V;[HV]PPK{I|L}{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PVK{I|L}{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L}K{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PV{I|L}K{I|L}V;[HV]PP{I|L}K{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}PK{I|L}V;[HV]P{I|L}PK{I|L}V;[{I|L}V]HPPK{I|L}V 6.7085;6.1744;5.8405;5.8405;5.4797;5.1459;5.1459;5.0716;4.7377;4.594 -;-;-;-;-;-;-;-;-;- 416 1 1.54 75129.8 1.0 5749 4656 10397 HBL1_DMSO_200M_050219_2,10407 HBL1_DMSO_200M_050219_2,10407,KPPHVILV False True KPPHVILV 56.34968 451.795123279095 4865756.5 10397.0 ENSG00000119203|ENST00000238112|CPSF3 4.439147154490153 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10408 56.36 612.0 398090.0 25 0 42841.0 + 34607 SPIVSPRI 8 155 434.7660548721096 867.5175568110193 2 434.7662536501884 MULTI CID FTMS 0 0 0 10397 307832.96875 0.3131808249429238 3 -0.3339881896972656 11 Unmodified _SPIVSPRI_ ENSG00000112029|ENST00000229758|FBXO5;nc|ENSG00000112029|Q9UKT4-2|FBXO5 49.93300154707207 0.1395624531867191 4 SP{I|L}VS{I|L}[RP] 8 2 + 75.295 0.0 0.0 8.6794 8.6794 83.754 0.0 0.0 0.0 34.779517839669424 2.430380486862944 2.430380486862944 2.430380486862944 0 0.8807196863200843 2.0 0.3494850021680094 0.5649093276264391 SP{I|L}VS{I|L}[RP];SP{I|L}VS[RP]{I|L};SP{I|L}V{I|L}S[RP];SP{I|L}{I|L}VS[RP];S{I|L}PVS{I|L}[RP];S{I|L}PVS[RP]{I|L};S{I|L}PV{I|L}S[RP];S{I|L}P{I|L}VS[RP] 8.6794;8.3993;8.1015;7.2753;5.5881;5.308;5.0102;4.184 -;+;-;-;-;-;-;- + 330 + 1 1.54 190944.3 1.0 5750 4656 10397 HBL1_DMSO_200M_050219_2,10408 HBL1_DMSO_200M_050219_2,10408,SPIVSPRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10409 56.371 633.0 222640.0 25 0 22963.0 -1 VYLGRDKTMQL 11 126 670.3535937146245 1338.6926344960489 2 670.3550292849541 MULTI CID FTMS 0 0 0 10397 216728.828125 0.3979040810610251 -1 0.0989418029785156 12 Oxidation (M) _VYLGRDKTM(Oxidation (M))QL_ ENSG00000075539|ENST00000358350|FRYL 36.506200033944 0.2662161991516171 4 VY{I|L}T[TA]{I|L}G[CS]QA{I|L} 13 -1 + 94.347 0.0 0.0 7.0477 7.0477 77.365 0.0 0.0 0.0 13.99298082467746 13.99298082467746 13.99298082467746 0.7918124604762511 0 2.0669015600442577 2.0 0.8494850021680094 0.25 VY{I|L}T[TA]{I|L}G[CS]QA{I|L};VY{I|L}T[TA]{I|L}GT{[C(Carbamidomethyl (C))G]|[NC]}A{I|L};VY{I|L}T[TA]{I|L}EWM{I|L};VY{I|L}T[TA]G{I|L}[CS]QA{I|L};VY{I|L}T[TA]G{I|L}T{[C(Carbamidomethyl (C))G]|[NC]}A{I|L};VY{I|L}T[QT]{I|L}[CS]QA{I|L};VY{I|L}T[TA]{I|L}[C(Carbamidomethyl (C))S]QA{I|L};VY{I|L}T[QT]{I|L}T{[C(Carbamidomethyl (C))G]|[NC]}A{I|L};VY{I|L}T[TA]{I|L}GT[C(Carbamidomethyl (C))Q]{I|L};VY{I|L}T[TA]G{I|L}T[C(Carbamidomethyl (C))Q]{I|L} 7.0477;6.9885;6.7847;6.6913;6.6321;6.5515;6.5515;6.4924;6.4753;6.1189 -;-;-;-;-;-;-;-;-;- 12178 + 1 1.54 102595.9 1.0 5751 4656 10397 HBL1_DMSO_200M_050219_2,10409 HBL1_DMSO_200M_050219_2,10409,VYLGRDKTMQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10410 56.384 747.0 180770.0 25 0 12703.0 -1 0 122 881.9127461829552 1761.8109394327105 2 881.9185058474541 MULTI CID FTMS 0 0 0 10397 181940.6875 0.174595058716531 8 -0.7238388061523438 13 4 [NP]{I|L}N{[CA]|SS}[H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 73.119 0.0 0.0 4.1502 4.1502 64.456 0.0 0.0 0.0 0.012714607746318 0.012714607746318 0.012714607746318 0.012714607746318 0 0.6989700043360187 0.9208187539523752 0.3807196863200844 1.2302046884880935 [NP]{I|L}N{[CA]|SS}[H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAERR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAERR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEAERR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAE[VG]R{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAER[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEARR[C(Carbamidomethyl (C))M]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEARRE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}N[NS]QRR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[H{I|L}]Q[TA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 4.1502;4.1495;3.6358;3.6358;3.6358;3.6358;3.2775;3.1776;3.1561;2.9148 -;-;-;-;-;-;-;-;-;- 2046 1 1.54 91827.1 1.0 5752 4656 10397 HBL1_DMSO_200M_050219_2,10410 HBL1_DMSO_200M_050219_2,10410, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10411 56.398 800.0 41443.0 25 0 5884.1 -1 0 32 1172.9595465998898 7031.713620799739 6 1173.797290027142 MULTI CID FTMS 0 0 0 10397 176850.125 0.1414822788270939 5 -0.5320663452148438 14 4 C{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3 -1 7.4473 0.0 0.0 0.10591 0.0 0.0 6666.580156944528 0.0 6666.580156944528 0.0 7.447274948966937 0.0 0.0 0 0.0 0.0 0.0 0.0 C{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 0.10591 - 8 + 1 1.54 32060.4 0.8799999952316284 5753 4656 10397 HBL1_DMSO_200M_050219_2,10411 HBL1_DMSO_200M_050219_2,10411, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10412 56.41 698.0 304970.0 25 0 18600.0 + 9992 FPIQWAIL 8 214 494.2848575762056 986.5551622192112 2 494.7868835330009 MULTI CID FTMS 0 0 0 10397 185895.6875 0.008962052060558 14 -1.1396331787109375 15 Unmodified _FPIQWAIL_ REV__ENSG00000134516|ENST00000520908|DOCK2;REV__ENSG00000150760|ENST00000623213|DOCK1;REV__ENST00000520450.5_1_5:169484535-169509859:+|nuORF;REV__ENST00000523351.5_1_5:169188379-169509859:+|nuORF;REV__nc|ENSG00000150760|Q14185|DOCK1 19.438996006549623 0.6237395211498085 4 GES[{I|L}V]ATPE 9 -1 40.653 0.0 0.0 4.1207 0.0 0.0 85.08993727851718 0.0 85.08993727851718 0.0 18.575090722850263 0.0 0.0 0 0.6549471895720985 0.0 0.25 0.0 GES[{I|L}V]ATPE 4.1207 - 1637 1 1.54 160729.9 1.0 5754 4656 10397 HBL1_DMSO_200M_050219_2,10412 HBL1_DMSO_200M_050219_2,10412,FPIQWAIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10413 56.426 794.0 122710.0 25 0 5354.9 + -1 LPYLSQEHQQQV 12 144 735.3720569254363 1468.7295609176724 2 735.3744384646416 MULTI CID FTMS 0 0 0 10397 150174.65625 1.0 0 0.0 16 2 Oxidation (M) _LM(Oxidation (M))LWEHPRPKM(Oxidation (M))_ ENST00000590067.5_1_19:3053819-3055997:-|nuORF;ENSG00000104964|ENST00000327141|TLE5;nc|ENSG00000104964|Q08117-2|TLE5 27.628801355627647 0.4434699450731472 4 {I|L}PY{I|L}{[QS]|[NT]}EHQQQV 12 -1 + 92.511 0.0 0.0 6.2987 6.2987 83.193 0.0 0.0 0.0 21.208278042566533 6.210371462279724 6.210371462279724 6.210371462279724 0 2.4049471895720984 1.3979400086720375 0.0 2.166386562212267 {I|L}PY{I|L}{[QS]|[NT]}EHQQQV;{I|L}PY{I|L}{[QS]|[NT]}EHQQN{I|L};{I|L}PY{I|L}{[QS]|[NT]}EHQQVQ;{I|L}PY{I|L}[{M(Oxidation (M))|F}T]E[MT]QQV;{I|L}PY{I|L}{[QS]|[NT]}EHQ{I|L}NQ;{I|L}PY{I|L}[{M(Oxidation (M))|F}T]NH[HT]QV;{I|L}PY{I|L}[{M(Oxidation (M))|F}T]E[MT]QVQ;{I|L}PY{I|L}[{M(Oxidation (M))|F}T]E[MT]QN{I|L};{I|L}PY{I|L}[{M(Oxidation (M))|F}T]E[MT]{I|L}NQ;{I|L}PY{I|L}{[QS]|[NT]}E{[NV]|[RG]}YM{I|L} 6.2987;5.8759;5.8759;5.845;5.7336;5.5172;5.4222;5.4222;5.2798;5.183 -;-;-;-;-;-;-;-;-;- 8757 + 1 1.54 74604.6 1.0 5755 4656 10397 HBL1_DMSO_200M_050219_2,10413 HBL1_DMSO_200M_050219_2,10413,LMLWEHPRPKM False False LPYLSQEHQQQV 56.425567 735.374438464642 2276069.5 10397.0 ENST00000590067.5_1_19:3053819-3055997:-|nuORF;;ENSG00000104964|ENST00000327141|TLE5;;nc|ENSG00000104964|Q08117-2|TLE5 8.522902806599935 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10414 56.433 416.0 304700.0 25 0 18033.0 + 16292 IWGVGSVPV 9 163 457.2626572165269 0 457.2612792849541 PEAK CID FTMS 0 0 0 10397 156159.171875 0.3493729966224646 15 -1.177520751953125 17 Unmodified _IWGVGSVPV_ ENSG00000257335|ENST00000475668|MGAM;nc|ENSG00000257335|O43451-1|MGAM 34.10243960390752 0.0907105591560806 4 S{I|L}C(Carbamidomethyl (C)) 3 8 13.611 0.0 0.0 1.4915 0.0 0.0 113.08476404605469 436.2523287408813 549.337092786936 0.0 0.0 0.0 0.0 0 0.6443525400371295 0.0 0.0 0.0 S{I|L}C(Carbamidomethyl (C)) 1.4915 - 379 + 1 1.54 96524.0 1.0 5756 4656 10397 HBL1_DMSO_200M_050219_2,10414 HBL1_DMSO_200M_050219_2,10414,IWGVGSVPV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10415 56.436 162.0 467480.0 25 0 105320.0 -1 0 68 605.3383697088835 604.3310932422835 1 605.3359252810478 MULTI CID FTMS 0 0 0 10397 133756.734375 0.0947581941343557 -2 0.1799659729003906 18 4 H 1 -1 10.969 0.0 0.0 1.8151 0.0 0.0 449.2611754950163 0.0 449.2611754950163 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.8151 - 6 + 1 1.54 60781.2 1.0 5757 4656 10397 HBL1_DMSO_200M_050219_2,10415 HBL1_DMSO_200M_050219_2,10415, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10416 56.451 800.0 241980.0 25 0 16616.0 + + -1 SVMDQEMRV 9 211 547.2798808968067 0 547.2792846560478 PEAK CID FTMS 0 0 0 10397 94913.2265625 0.7861091878978625 1 -0.1362762451171875 19 Carbamidomethyl (C) _SVQLSTVC(Carbamidomethyl (C))SL_ nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1;ENSG00000002822|ENST00000265854|MAD1L1 9.38312468134398 0.3794934366477728 4 MDQEM 5 -1 26.23 0.0 0.0 2.4008 0.0 0.0 185.1544321202597 270.1576326959594 455.3120648162192 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 MDQEM 2.4008 - 996 + 1 1.54 144463.4 0.9700000286102296 5758 4656 10397 HBL1_DMSO_200M_050219_2,10416 HBL1_DMSO_200M_050219_2,10416,SVQLSTVCSL False False SVMDQEMRV 56.451198 547.279284656048 758261.25 10397.0 nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1;;ENSG00000002822|ENST00000265854|MAD1L1 5.791280587514241 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10417 56.465 800.0 36218.0 25 0 3672.3 -1 0 42 1089.792407214642 0 1089.792407214642 PEAK CID FTMS 0 0 0 -1 0 20 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.32099 0.0 0.0 581.7730946033092 1445.692060278607 2027.465154881916 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.32099 - 5 + 1 1.54 31717.5 0.5600000023841858 5759 4656 10397 HBL1_DMSO_200M_050219_2,10417 HBL1_DMSO_200M_050219_2,10417, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10419 56.469 2.3 13874000.0 25 0 1412200.0 + 4015 DALRSGLTV 9 54 466.2639604463565 930.5133679595132 2 466.2645141482353 MULTI CID FTMS 0 0 0 10418 17137022.0 0.087008424610234 3 -0.3265380859375 1 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 26.268140514670165 0.1969607489560049 4 {[DA]|[EG]}[R{I|L}][SG]{I|L}TV 9 0 + 43.362 0.0 0.0 4.6601 4.6601 81.147 0.0 0.0 0.0 9.33870275605898 23.116742845273063 9.33870275605898 9.542425094393243 0 0.5 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}[R{I|L}][SG]{I|L}TV;{[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[DA]|[EG]}[R{I|L}][KT]EV;{[SA]|[TG]}[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 4.6601;3.6346;3.103;3.0235 +;-;-;- + 55 1 1.541 29974.8 1.0 5760 4657 10418 HBL1_DMSO_200M_050219_2,10419 HBL1_DMSO_200M_050219_2,10419,DALRSGLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10420 56.471 50.0 704970.0 25 0 81820.0 + 12613 GVISDTELQQA 11 77 580.7931769527355 1159.571800972271 2 580.7935668826103 MULTI CID FTMS 0 0 0 10418 868356.875 0.2717079510751208 2 -0.1977119445800781 2 Unmodified _GVISDTELQQA_ ENSG00000249915|ENST00000264933|PDCD6;ENST00000507290.5_1_5:1632852-1634017:-|nuORF;ENST00000507505.5_1_5:1599907-1634017:-|nuORF;ENST00000507841.5_1_5:1632852-1634017:-|nuORF;ENST00000515587.1_1_5:271739-272994:+|nuORF;nc|ENSG00000249915|O75340-2|PDCD6;nc|ENSG00000249915|O75340-3|PDCD6 30.63653989081413 0.3728473165938781 4 [AG]S{[C(Carbamidomethyl (C))G]|[NC]}{I|L}R 7 8 22.934 0.0 0.0 1.9778 0.0 0.0 0.0 455.2236924119772 455.2236924119772 6.278552346835951 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.305462187404089 0.0 [AG]S{[C(Carbamidomethyl (C))G]|[NC]}{I|L}R 1.9778 - 208 1 1.541 34497.8 1.0 5761 4657 10418 HBL1_DMSO_200M_050219_2,10420 HBL1_DMSO_200M_050219_2,10420,GVISDTELQQA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10421 56.472 30.0 1196600.0 25 0 128700.0 + 44837 YPNTMVSSV 9 70 499.2366354834408 996.4587180336816 2 499.2366821169853 MULTI CID FTMS 0 0 0 10418 1607401.0 0.8055681089646208 2 -0.1977119445800781 3 Unmodified _YPNTMVSSV_ ENSG00000136738|ENST00000377524|STAM 32.30548876998284 0.1201446275138228 4 [NP]TMYVSSV 9 2 [NP]TMYV + + 26.727 29.742 4.2169 2.6822 2.6822 45.353 0.0 0.0 0.0 0.0 -3.0153844027245924 -3.0153844027245924 0.0 0 0.0 0.0 0.6549471895720984 0.0 [NP]TMYVSSV 2.6822 - 226 + 1 1.541 34895.2 1.0 5762 4657 10418 HBL1_DMSO_200M_050219_2,10421 HBL1_DMSO_200M_050219_2,10421,YPNTMVSSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10422 56.474 67.0 1297500.0 25 0 160120.0 + 18414 KVVEELTRI 9 91 543.829563693341 1085.644574453482 2 543.8297607302666 MULTI CID FTMS 0 0 0 10418 935859.4375 0.7328698729579735 -1 0.1362762451171875 4 Unmodified _KVVEELTRI_ ENSG00000167986|ENST00000301764|DDB1;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;ENST00000538470.2_1_11:61067610-61070684:-|nuORF;ENST00000540166.5_1_11:61067610-61069753:-|nuORF;ENST00000545894.1_1_11:61067610-61068439:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1 37.07464296494664 0.0915153923251136 4 KVVEE{I|L}RT{I|L} 9 2 + 87.742 0.0 0.0 8.0821 8.0821 93.75 0.0 0.0 0.0 55.80417117396523 12.779566568218186 12.779566568218186 11.505149978319906 0 1.805462187404089 1.0969100130080565 0.6109243748081782 0.0 KVVEE{I|L}RT{I|L};KV{I|L}DE{I|L}RT{I|L};KVV{I|L}EERT{I|L};K{I|L}VDE{I|L}RT{I|L};KV{I|L}VEERT{I|L};KVV{I|L}{[QG]|[NA]}[QT]T{I|L};{I|L}KVDE{I|L}RT{I|L};KV{I|L}V{[QG]|[NA]}[QT]T{I|L};K{I|L}VVEERT{I|L};{I|L}KVVEERT{I|L} 8.0821;7.0223;6.3549;5.3434;5.2952;5.2295;4.9563;4.1697;3.6163;3.2291 -;-;-;-;-;-;-;-;-;- 215 + 1 1.541 73836.2 1.0 5763 4657 10418 HBL1_DMSO_200M_050219_2,10422 HBL1_DMSO_200M_050219_2,10422,KVVEELTRI True True KVVEELTRI 56.4736 543.829760730267 9652702.0 10418.0 ENST00000545894.1_1_11:61067610-61068439:-|nuORF;;ENSG00000167986|ENST00000301764|DDB1;;nc|ENSG00000167986|Q16531-2|DDB1;;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;;ENST00000538470.2_1_11:61067610-61070684:-|nuORF;;ENST00000540166.5_1_11:61067610-61069753:-|nuORF 4.173795302708943 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10423 56.476 93.0 609640.0 25 0 64606.0 + 9958 FPGKHFQEI 9 83 551.7875691100098 1101.5605852868196 2 551.7880126833916 MULTI CID FTMS 0 0 0 10418 669056.625 0.1428609672598489 36 -3.370258331298828 5 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 45.739877483867886 0.0497104363764649 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E 9 3 + 51.704 0.0 0.0 4.6937 4.6937 80.27 0.0 0.0 0.0 20.0828855253408 16.478174818886373 16.478174818886373 9.208187539523747 0 0.9247425010840048 1.6989700043360187 0.8807196863200843 0.7742275032520141 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[YK]PE;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[YK]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[WP][KG]PE;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[AG][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}P[YK][YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[YK][AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[AG][RN][PA]Q{M(Oxidation (M))|F}{I|L}E 4.6937;3.8578;3.0183;2.8706;2.6384;2.5486;2.0298;1.876;1.7976;0.84083 -;-;-;-;-;-;-;-;-;- 470 1 1.541 50533.6 1.0 5764 4657 10418 HBL1_DMSO_200M_050219_2,10423 HBL1_DMSO_200M_050219_2,10423,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10424 56.481 286.0 619310.0 25 0 60485.0 + 20150 LKPGILPVPK 10 173 531.3577281216423 1060.7009033100844 2 531.3579589724541 MULTI CID FTMS 0 0 0 10418 376173.78125 0.0660023594154401 9 -0.6608543395996094 6 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 29.43715596616401 0.3072975788498757 4 K{I|L}AP{I|L}VKEV 9 -1 73.102 0.0 0.0 6.8919 0.0 0.0 0.0 80.05133234195546 80.05133234195546 54.74214396804989 0.0 0.0 0.0 0 1.424742501084005 0.6020599913279624 1.079689690656103 0.0 K{I|L}AP{I|L}VKEV 6.8919 - 1973 + 1 1.541 138189.8 1.0 5765 4657 10418 HBL1_DMSO_200M_050219_2,10424 HBL1_DMSO_200M_050219_2,10424,LKPGILPVPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10425 56.485 193.0 414660.0 25 0 48195.0 + 10742 FYHPETTQL 9 111 568.2744265489774 1134.5343001647548 2 568.2751953005791 MULTI CID FTMS 0 0 0 10418 336544.28125 0.3727063475638497 2 -0.1977119445800781 7 Unmodified _FYHPETTQL_ ENSG00000114416|ENST00000357559|FXR1;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1 44.40701690623563 0.0526327925666318 4 V{I|L}PK{I|L} 5 7 20.177 0.0 0.0 1.7785 0.0 0.0 566.1387446001048 0.0 566.1387446001048 0.0 1.2031054016417215 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}PK{I|L} 1.7785 - 618 + 1 1.541 66336.4 1.0 5766 4657 10418 HBL1_DMSO_200M_050219_2,10425 HBL1_DMSO_200M_050219_2,10425,FYHPETTQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10426 56.487 90.0 984380.0 25 0 138420.0 + 31426 RPNIPKIL 8 112 317.5433606586409 949.6082525761228 3 317.5430786013603 MULTI CID FTMS 0 0 0 10418 344195.59375 0.4400074320916792 3 -0.3265380859375 8 Unmodified _RPNIPKIL_ REV__ENSG00000184500|ENST00000394236|PROS1 13.90604991867851 0.7054780292895731 4 {I|L}{I|L} 2 -1 19.464 0.0 0.0 2.0497 0.0 0.0 0.0 720.4170351755065 720.4170351755065 1.0928360497213028 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 2.0497 + + 167 + 1 1.541 76737.7 1.0 5767 4657 10418 HBL1_DMSO_200M_050219_2,10426 HBL1_DMSO_200M_050219_2,10426,RPNIPKIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10427 56.491 223.0 375700.0 25 0 28665.0 + 35546 STPTSFNLRP 10 104 560.2945061358151 1118.5744593384302 2 560.2942382693291 MULTI CID FTMS 0 0 0 10418 285262.46875 0.9108600545853532 -1 0.1362762451171875 9 Unmodified _STPTSFNLRP_ REV__ENSG00000178921|ENST00000314666|PFAS 20.453626601364224 0.5043500229302764 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTNG{I|L}RP 10 -1 + 70.17 0.0 0.0 6.2732 6.2732 82.542 0.0 0.0 0.0 7.269987279362624 5.740312677277188 5.740312677277188 5.740312677277188 0 0.0 0.0 0.7742275032520141 0.7302046884880937 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTNG{I|L}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTNG{I|L}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTGGG{I|L}RP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTGGG{I|L}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTNG[RP]{I|L};[YV]{[CP]|[EA]}TNG{I|L}RP;[YV]{[CP]|[EA]}TNG{I|L}PR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MSTGGG[RP]{I|L};[YV]{[CP]|[EA]}TGGG{I|L}RP;[YV]M{[{M(Oxidation (M))|F}H]|[RQ]}G{I|L}RP 6.2732;5.76;5.4539;4.9407;3.8268;3.5644;3.0512;3.0075;2.7451;2.4422 -;-;-;-;-;-;-;-;-;- 369 + 1 1.541 71446.8 1.0 5768 4657 10418 HBL1_DMSO_200M_050219_2,10427 HBL1_DMSO_200M_050219_2,10427,STPTSFNLRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10428 56.493 92.0 519710.0 25 0 38839.0 + 26690 NYNNAVSSF 9 97 508.2279249407817 1014.4412969483634 2 508.2282287478447 MULTI CID FTMS 0 0 0 10418 269704.34375 1.0 0 0.0 10 Unmodified _NYNNAVSSF_ chr3:108125142-108135144|34|18.29|0.53|5.1|+|2|TE_info:THE1C,THE1C_dup1863,ERVL-MaLR,LTR,donor,+,108124859,108125142|None,LINC01215|6 28.486842064014134 0.1687311288560894 4 S{M(Oxidation (M))|F} 2 7 23.711 0.0 0.0 2.3374 0.0 0.0 762.32981425969 0.0 762.32981425969 0.0 11.492887666437142 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 + S{M(Oxidation (M))|F} 2.3374 + + 92 + 1 1.541 44110.4 1.0 5769 4657 10418 HBL1_DMSO_200M_050219_2,10428 HBL1_DMSO_200M_050219_2,10428,NYNNAVSSF False True False False TE_chimeric_transcript PXD020620_cell_line HBL1_DMSO_200M_050219_2 10429 56.497 193.0 229630.0 25 0 19707.0 43533 WWWWIWWQWW 10 58 874.9041028402406 1747.7936527472812 2 875.4001953005791 MULTI CID FTMS 0 0 0 10418 268176.34375 0.0921622269588499 17 -1.2545509338378906 11 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 4 DANN[NP]{[QN]|[E{I|L}]|[KN]} 8 9 29.698 0.0 0.0 1.6992 0.0 0.0 862.4308152969802 0.0 862.4308152969802 0.0 11.505398174961687 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.3807196863200844 DANN[NP]{[QN]|[E{I|L}]|[KN]} 1.6992 - 176 1 1.541 37040.9 1.0 5770 4657 10418 HBL1_DMSO_200M_050219_2,10429 HBL1_DMSO_200M_050219_2,10429,WWWWIWWQWW False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 10430 56.5 185.0 485100.0 25 0 70265.0 -1 0 124 399.231382753242 398.224106286642 1 399.2320739626884 MULTI CID FTMS 0 0 0 10418 235678.1875 0.7916126054646101 -1 0.1362762451171875 12 4 {I|L} 1 -1 10.181 0.0 0.0 2.5566 0.0 0.0 267.12893524347635 0.0 267.12893524347635 0.0 1.408624202342974 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.5566 - 16 + 1 1.541 77390.1 1.0 5771 4657 10418 HBL1_DMSO_200M_050219_2,10430 HBL1_DMSO_200M_050219_2,10430, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10431 56.508 452.0 246780.0 25 0 17543.0 + 45092 YPYPVSNSV 9 162 513.2500691340886 1024.485585334977 2 513.2502319216728 MULTI CID FTMS 0 0 0 10418 194235.078125 0.7104445660360148 -6 0.6340141296386719 13 Unmodified _YPYPVSNSV_ ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 53.57557251787612 0.0325303259649373 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPYSN[VS] 9 2 + 53.918 0.0 0.0 5.263 5.263 72.229 0.0 0.0 0.0 9.483452341361 30.65552802072581 9.483452341361 1.7609125905568137 0 0.4247425010840047 1.6989700043360187 0.3807196863200844 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPYSN[VS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPVSN[VS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPYSGG[VS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPVSGG[VS];[VS]NRYSN[VS];[VP]YPYSN[VS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[Q{I|L}]QDV;[VS]GGRYSN[VS];[VS]NRYSGG[VS];[VS]N[VG]YSN[VS] 5.263;5.0911;4.3641;4.1923;3.8658;3.8211;3.0058;2.967;2.967;2.967 -;+;-;-;-;-;-;-;-;- + 1712 1 1.541 88998.6 1.0 5772 4657 10418 HBL1_DMSO_200M_050219_2,10431 HBL1_DMSO_200M_050219_2,10431,YPYPVSNSV True True YPYPVSNSV 56.508187 513.250231921673 6316936.0 10418.0 ENST00000563314.5_1_16:28834580-28846939:+|nuORF;;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;;ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;;ENSG00000168488|ENST00000336783|ATXN2L;;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;;nc|ENSG00000168488|Q8WWM7-5|ATXN2L 6.514412720998128 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10432 56.522 800.0 255830.0 25 0 12330.0 + 34763 SQANVVVKI 9 196 479.2897716988677 956.5649904645352 2 479.2897521853447 MULTI CID FTMS 0 0 0 10418 117280.6484375 0.1121863034557923 4 -0.3957901000976562 14 Unmodified _SQANVVVKI_ ENSG00000100219|ENST00000344347|XBP1 38.17557092003332 0.0854718145212029 4 VVVK{I|L} 5 4 23.811 0.0 0.0 2.4892 0.0 0.0 400.16974007566654 0.0 400.16974007566654 0.0 2.871240850771269 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.1923877696554315 + VVVK{I|L} 2.4892 + + 706 + 1 1.541 155515.5 0.7300000190734863 5773 4657 10418 HBL1_DMSO_200M_050219_2,10432 HBL1_DMSO_200M_050219_2,10432,SQANVVVKI True True SQANVVVKI 56.522002 479.289752185345 8006785.5 10418.0 ENSG00000100219|ENST00000344347|XBP1 3.69848895072937 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10433 56.536 800.0 179960.0 25 0 8888.1 + 8128 EPKIMKVTV 9 178 522.8092073664163 1043.6038617996326 2 522.8096801638603 MULTI CID FTMS 0 0 0 10418 115178.484375 0.9795670139670984 -1 0.1362762451171875 15 Unmodified _EPKIMKVTV_ ENSG00000135018|ENST00000376395|UBQLN1;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;nc|ENSG00000135018|Q9UMX0-4|UBQLN1 29.84058131909904 0.1515068451768857 4 [H{I|L}][KA]MKVT 8 4 28.475 0.0 0.0 2.7285 0.0 0.0 0.0 132.06575293399217 132.06575293399217 -9.092227190405971 0.0 -9.092227190405971 0.0 0 0.0 0.8860566476931632 0.3494850021680094 0.0 [H{I|L}][KA]MKVT 2.7285 - 1304 1 1.541 117642.9 0.7900000214576721 5774 4657 10418 HBL1_DMSO_200M_050219_2,10433 HBL1_DMSO_200M_050219_2,10433,EPKIMKVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10434 56.55 800.0 65888.0 25 0 15469.0 -1 0 49 1125.4397676528697 3373.297473558809 3 1125.774096667767 MULTI CID FTMS 0 0 0 10418 104277.5625 1.0 0 0.0 16 4 {[{M(Oxidation (M))|F}H]|[RQ]}Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F} 6 -1 12.152 0.0 0.0 0.36025 0.0 0.0 0.0 2481.91494117039 2481.91494117039 5.162574822053545 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {[{M(Oxidation (M))|F}H]|[RQ]}Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F} 0.36025 - 41 1 1.541 51054.6 0.6000000238418579 5775 4657 10418 HBL1_DMSO_200M_050219_2,10434 HBL1_DMSO_200M_050219_2,10434, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10435 56.565 800.0 167930.0 25 0 11933.0 -1 YYTPDRMVL 9 161 587.2837366500792 1172.5529203669582 2 587.2841064333916 MULTI CID FTMS 0 0 0 10418 98311.6015625 1.0 0 0.0 17 Oxidation (M) _YYTPDRM(Oxidation (M))VL_ ENSG00000165688|ENST00000371717|PMPCA;ENST00000462616.1_1_9:139311477-139313651:+|nuORF;nc|ENSG00000165688|Q10713-2|PMPCA 27.628801355627647 0.1796483985696185 4 YYT{[SA]|[TG]}[VP]EP{M(Oxidation (M))|F} 10 -1 + 73.198 0.0 0.0 6.2426 6.2426 80.561 0.0 0.0 0.0 35.75048156944675 4.191293077419758 4.191293077419758 4.191293077419758 0 0.9247425010840048 2.0 1.2346368802282015 0.0 YYT{[SA]|[TG]}[VP]EP{M(Oxidation (M))|F};YYT{[SA]|[TG]}[VP]EM{I|L};YYT{[SA]|[TG]}[VP]E{I|L}M;YY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP]EP{M(Oxidation (M))|F};YYTP[YT]TP[PA];YY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP]EM{I|L};YY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP]E{I|L}M;YYTPQQ{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F};YYT[{M(Oxidation (M))|F}E][RV][VP];Y[RH]E[VP]EP{M(Oxidation (M))|F} 6.2426;5.8851;5.5423;4.961;4.6258;4.6036;4.2607;4.228;3.6219;1.8743 -;-;-;-;-;-;-;-;-;- 902 + 1 1.541 100492.8 0.6800000071525574 5776 4657 10418 HBL1_DMSO_200M_050219_2,10435 HBL1_DMSO_200M_050219_2,10435,YYTPDRMVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10437 56.57 16.0 3492600.0 25 0 878100.0 + 43689 YAYDGKDYL 9 60 554.2533874371126 1106.492221941025 2 554.2536498904228 MULTI CID FTMS 0 0 0 10436 3152150.75 0.6676279067403155 1 -0.0976409912109375 1 Unmodified _YAYDGKDYL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 29.84058131909904 0.1515068451768857 4 YAY[{M(Oxidation (M))|F}V]YDG 8 5 67.102 0.0 0.0 6.0644 0.0 0.0 0.0 125.07241235904532 125.07241235904532 50.90411276716473 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.6747425010840047 0.0 YAY[{M(Oxidation (M))|F}V]YDG 6.0644 - 267 + 1 1.541 51796.6 1.0 5777 4658 10436 HBL1_DMSO_200M_050219_2,10437 HBL1_DMSO_200M_050219_2,10437,YAYDGKDYL False True YAYDGKDYL 56.569553 554.253649890423 113804964.0 10436.0 nc|ENSG00000204632|P17693-4|HLA-G;;nc|ENSG00000204632|P17693-5|HLA-G;;ENSG00000204632|ENST00000360323|HLA-G 2.792925159136454 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10438 56.571 17.0 3224200.0 25 0 456440.0 4407 DAVRIVHI 8 75 461.7773070204923 921.5400611077846 2 461.7773925662041 MULTI CID FTMS 0 0 0 10436 2615041.75 0.5916531293765229 1 -0.0976409912109375 2 Unmodified _DAVRIVHI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-5|BRCC3;nc|ENSG00000185515|P46736|BRCC3 29.84058131909904 0.4163871034372953 4 {[DA]|[EG]}[RV]{I|L}VH{I|L} 8 0 + 50.251 0.0 0.0 5.4529 5.4529 78.517 0.0 0.0 0.0 4.948500216800937 16.40978057358332 4.948500216800937 4.948500216800937 0 0.75 1.0969100130080565 0.2396518287104437 0.0 + + {[DA]|[EG]}[RV]{I|L}VH{I|L};{[QG]|[NA]}[KQ]{I|L}VH{I|L} 5.4529;4.916 +;- + 55 1 1.541 47469.4 1.0 5778 4658 10436 HBL1_DMSO_200M_050219_2,10438 HBL1_DMSO_200M_050219_2,10438,DAVRIVHI False True RVADLVHI 56.570733 461.777392566204 35600180.0 10436.0 nc|ENSG00000184216|P51617-3|IRAK1;;nc|ENSG00000184216|P51617-4|IRAK1;;nc|ENSG00000184216|P51617-2|IRAK1;;ENSG00000184216|ENST00000369980|IRAK1 0.5152967572212219 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10439 56.572 18.0 3867400.0 25 0 413280.0 + 44672 YPFKPPKV 8 64 488.2868778785377 974.5592028238756 2 488.2870361208916 MULTI CID FTMS 0 0 0 10436 3256989.5 0.1071113869933404 -17 1.66973876953125 3 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 36.04419817259434 0.3004715606373109 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 63.09 0.0 0.0 6.4737 6.4737 92.637 0.0 0.0 0.0 40.34949089312384 5.839125404248904 5.839125404248904 49.61671319759944 0 0.3807196863200844 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.4737;1.3825;0.50223 +;-;- + 99 + 1 1.541 58714.7 1.0 5779 4658 10436 HBL1_DMSO_200M_050219_2,10439 HBL1_DMSO_200M_050219_2,10439,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10440 56.573 66.0 1241200.0 25 0 120590.0 + 4409 DAVRIVHI 8 99 308.1872087171639 921.5397967516916 3 308.1869994997978 MULTI CID FTMS 0 0 0 10436 1055565.625 0.7595601804733751 1 -0.0976409912109375 4 Unmodified _DAVRIVHI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-5|BRCC3;nc|ENSG00000185515|P46736|BRCC3 25.399314129420983 0.5099049743284904 4 DAV{I|L}RVH{I|L} 8 2 + 64.576 0.0 0.0 7.0074 7.0074 94.076 0.0 0.0 0.0 47.13615337528019 11.453650195120844 11.453650195120844 32.730012720637376 0 0.3252574989159953 1.6989700043360187 0.0 0.0 DAV{I|L}RVH{I|L};WV{I|L}[VG]VH{I|L} 7.0074;3.4558 -;- 102 + 1 1.541 72301.4 1.0 5780 4658 10436 HBL1_DMSO_200M_050219_2,10440 HBL1_DMSO_200M_050219_2,10440,DAVRIVHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10441 56.576 94.0 803770.0 25 0 68507.0 + + 37467 RFHEMHVAL 9 89 380.1964885642342 1137.5676362929023 3 380.5306579470634 MULTI CID FTMS 0 0 0 10436 426095.4375 0.5681483661809431 -1 0.1000709533691406 5 Unmodified _TLFCGWLWL_ ENSG00000131653|ENST00000326181|TRAF7;nc|ENSG00000131653|Q6Q0C0-2|TRAF7 7.910154910731844 0.6385446671287552 4 [{I|L}T][EP]EMH 7 -1 34.481 0.0 0.0 3.0311 0.0 0.0 0.0 297.1739504490442 297.1739504490442 18.439163794909334 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}T][EP]EMH 3.0311 - 197 1 1.541 71698.0 1.0 5781 4658 10436 HBL1_DMSO_200M_050219_2,10441 HBL1_DMSO_200M_050219_2,10441,TLFCGWLWL False False RFHEMHVAL 56.575539 380.530657947063 6672284.0 10436.0 ENSG00000131653|ENST00000326181|TRAF7;;nc|ENSG00000131653|Q6Q0C0-2|TRAF7 4.624624093373616 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10442 56.58 249.0 253650.0 25 0 27733.0 + -1 NYYDQGYGNYNSAY 14 97 846.3340789101264 1690.6536048870528 2 846.3337890505791 MULTI CID FTMS 0 0 0 10436 322842.9375 0.4152254984386501 -2 0.2363471984863281 6 2 Carbamidomethyl (C),Oxidation (M) _RM(Oxidation (M))WWYFGC(Carbamidomethyl (C))YFC(Carbamidomethyl (C))_ ENSG00000152795|ENST00000295470|HNRNPDL;nc|ENSG00000152795|O14979-2|HNRNPDL 0.0 0.8751479354844584 4 [YN]YDQGGYNY 10 -1 84.889 0.0 0.0 5.0211 0.0 0.0 0.0 450.1603020377272 450.1603020377272 56.16186969052097 0.0 0.0 0.0 0 0.0 2.0 0.5 2.254432191740108 [YN]YDQGGYNY 5.0211 - 9433 1 1.541 48519.9 1.0 5782 4658 10436 HBL1_DMSO_200M_050219_2,10442 HBL1_DMSO_200M_050219_2,10442,RMWWYFGCYFC False False NYYDQGYGNYNSAY 56.580199 846.333789050579 16889186.0 10436.0 ENSG00000152795|ENST00000295470|HNRNPDL;;nc|ENSG00000152795|O14979-2|HNRNPDL 6.787102222442627 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10443 56.584 219.0 345200.0 25 0 23827.0 + 15248 IPGAGQITGV 10 109 456.7612529728513 0 456.7610046267509 PEAK CID FTMS 0 0 0 10436 300713.9375 0.6852713858405982 -3 0.3352890014648437 7 Unmodified _IPGAGQITGV_ REV__ENSG00000154144|ENST00000441174|TBRG1;REV__ENST00000452080.5_1_11:124492979-124496602:+|nuORF;REV__ENST00000473629.6_1_11:124492979-124496722:+|nuORF 32.30548876998284 0.1927752022612489 4 {I|L}TT 3 -1 23.037 0.0 0.0 2.5274 0.0 0.0 523.2753613150402 70.0306643121703 593.3060256272105 0.0 0.0 0.0 0.0 0 1.0 0.0 0.4559771852360796 0.0 {I|L}TT 2.5274 - 174 + 1 1.541 65127.6 1.0 5783 4658 10436 HBL1_DMSO_200M_050219_2,10443 HBL1_DMSO_200M_050219_2,10443,IPGAGQITGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10444 56.59 327.0 369210.0 25 0 32220.0 + 22055 LPPPPPPHL 9 115 482.78449894353474 963.5544449538696 2 482.7842895388603 MULTI CID FTMS 0 0 0 10436 274934.53125 0.1424280524969762 18 -1.3647079467773438 8 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 67.41302359171755 0.0220989861905124 4 {I|L}PPPPPPH{I|L} 9 0 + 86.648 0.0 0.0 8.9926 8.9926 97.182 0.0 0.0 0.0 74.65858457933251 10.50234911887138 10.50234911887138 22.21848749616356 0 0.805462187404089 2.0 0.0 0.0 + + {I|L}PPPPPPH{I|L};{I|L}PPP[YK]H{I|L};{I|L}PP[YK]PH{I|L};{I|L}P[YK]PPH{I|L};{I|L}P[KT]QQH{I|L};{I|L}[YK]PPPH{I|L};{I|L}[YK][YK]H{I|L} 8.9926;6.6867;6.6867;6.2916;4.3456;3.7751;1.4763 +;-;-;-;-;-;- + 414 + 1 1.541 94229.1 1.0 5784 4658 10436 HBL1_DMSO_200M_050219_2,10444 HBL1_DMSO_200M_050219_2,10444,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10445 56.599 494.0 348680.0 25 0 31250.0 + 3721 DAFQRLRKI 9 163 382.8957702593424 1145.6654813782272 3 382.8959838747978 MULTI CID FTMS 0 0 0 10436 275212.34375 1.0 0 0.0 9 Unmodified _DAFQRLRKI_ ENSG00000165630|ENST00000378572|PRPF18 24.99096001346401 0.2132109383330889 4 DA{I|L}K 4 5 60.477 0.0 0.0 5.2788 0.0 0.0 0.0 715.4005513225254 715.4005513225254 41.01342204748164 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.7742275032520141 DA{I|L}K 5.2788 - 124 + 1 1.541 136115.7 1.0 5785 4658 10436 HBL1_DMSO_200M_050219_2,10445 HBL1_DMSO_200M_050219_2,10445,DAFQRLRKI False True DAFQRLRKI 56.598982 382.895983874798 1498234.125 10436.0 ENSG00000165630|ENST00000378572|PRPF18 2.6284996271133423 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10446 56.603 200.0 362740.0 25 0 39048.0 + 28868 QALEARLV 8 98 450.268875246044 898.523197558888 2 450.2689391970634 MULTI CID FTMS 0 0 0 10436 256790.09375 1.0 0 0.0 10 Unmodified _QALEARLV_ ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11 52.268347100219714 0.1285778651304833 4 [QA]{I|L}EAR{I|L}V 8 0 + 58.342 0.0 0.0 6.4931 6.4931 82.877 0.0 0.0 0.0 20.0 5.234810958495231 5.234810958495231 5.234810958495231 0 1.0941876774005248 1.3010299956639813 0.4247425010840047 0.0 + + [QA]{I|L}EAR{I|L}V;[QA]{I|L}EARV{I|L};[QA]{I|L}[KQ]{[NV]|[RG]}V;[AG]A{I|L}[KQ]{[NV]|[RG]}V 6.4931;5.9105;3.3183;1.4192 +;-;-;- + 78 + 1 1.541 64522.6 1.0 5786 4658 10436 HBL1_DMSO_200M_050219_2,10446 HBL1_DMSO_200M_050219_2,10446,QALEARLV False True QALEARLV 56.602801 450.268939197063 2121711.0 10436.0 ENSG00000108671|ENST00000261712|PSMD11;;nc|ENSG00000108671|O00231-2|PSMD11 1.7178832689921062 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10447 56.617 800.0 442540.0 25 0 112140.0 + 31775 RSINKLIRI 9 174 556.8665408746722 1111.7185288161445 2 556.8669921755791 MULTI CID FTMS 0 0 0 10436 213029.578125 0.4744233226860407 -2 0.2363471984863281 11 Unmodified _RSINKLIRI_ ENSG00000134001|ENST00000256383|EIF2S1;ENST00000556724.1_1_14:67827147-67841270:+|nuORF 28.49450938151212 0.1686335738423394 4 {[QS]|[NT]}[PA]VMVW 8 8 29.517 0.0 0.0 2.6551 0.0 0.0 0.0 210.27642611522552 210.27642611522552 0.2410683682277969 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.7059771852360797 0.5 {[QS]|[NT]}[PA]VMVW 2.6551 - 1254 1 1.541 267784.3 0.9700000286102296 5787 4658 10436 HBL1_DMSO_200M_050219_2,10447 HBL1_DMSO_200M_050219_2,10447,RSINKLIRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10448 56.63 800.0 299440.0 25 0 25096.0 + 31211 RLQETEGMVAV 11 134 616.8186074317987 1231.6226619303973 2 616.8189575076103 MULTI CID FTMS 0 0 0 10436 212548.375 0.8729964398194721 -1 0.1000709533691406 12 Unmodified _RLQETEGMVAV_ ENSG00000100281|ENST00000216106|HMGXB4;ENST00000418170.5_1_22:35660034-35689641:+|nuORF 40.72490554402381 0.2012291192650359 4 {[ES]|[DT]|[{I|L}C]}VVA[RD]GMVAV 12 6 + 84.263 0.0 0.0 6.8416 6.8416 77.729 0.0 0.0 0.0 3.529455342775165 16.611814434466197 3.529455342775165 1.342471084272205 0 0.5 0.0 2.416386562212267 0.3494850021680094 {[ES]|[DT]|[{I|L}C]}VVA[RD]GMVAV;{[ES]|[DT]|[{I|L}C]}VVAAAEGMVAV;[VS]EVA[RD]GMVAV;VVSEA[RD]GMVAV;{[ES]|[DT]|[{I|L}C]}VV{[NV]|[RG]}EGMVAV;{[TV]|[{I|L}S]}DVA[RD]GMVAV;{[ES]|[DT]|[{I|L}C]}VVAAAWMVAV;{[ES]|[DT]|[{I|L}C]}VAV[RD]GMVAV;{[VA]|[{I|L}G]}ESV[RD]GMVAV;{[ES]|[DT]|[{I|L}C]}VAVAAEGMVAV 6.8416;6.7326;6.555;6.3338;6.3155;6.2209;6.1933;6.1844;6.1377;6.0754 -;-;-;-;-;-;-;-;-;- 19898 1 1.541 176701.4 0.9399999976158142 5788 4658 10436 HBL1_DMSO_200M_050219_2,10448 HBL1_DMSO_200M_050219_2,10448,RLQETEGMVAV False True RLQETEGMVAV 56.630486 616.81895750761 2180568.25 10436.0 ENST00000418170.5_1_22:35660034-35689641:+|nuORF;;ENSG00000100281|ENST00000216106|HMGXB4 3.703363060951233 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10449 56.633 133.0 484910.0 25 0 41457.0 -1 VAAMGALQGL 10 102 473.7532292149006 945.4919054966012 2 473.7511474490166 MULTI CID FTMS 0 0 0 10436 216103.96875 0.0847862129987903 10 -0.8191299438476562 13 Oxidation (M) _VAAM(Oxidation (M))GALQGL_ ENSG00000136286|ENST00000258787|MYO1G;ENST00000463516.5_1_7:45003626-45005995:-|nuORF;ENST00000483585.5_1_7:45002340-45005995:-|nuORF 18.13498045792455 0.5432546531930572 4 [DP]PY 4 -1 39.253 0.0 0.0 4.1515 0.0 0.0 0.0 470.2583712213501 470.2583712213501 13.84643433451714 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 [DP]PY 4.1515 - 242 + 1 1.541 53976.5 1.0 5789 4658 10436 HBL1_DMSO_200M_050219_2,10449 HBL1_DMSO_200M_050219_2,10449,VAAMGALQGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10450 56.639 348.0 308480.0 25 0 33223.0 + -1 YVYPDERTAL 10 112 613.7646412016173 0 613.7640258669853 PEAK CID FTMS 0 0 0 10436 172236.390625 0.6940945729466724 -2 0.2363471984863281 14 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LGSAWADC(Carbamidomethyl (C))TV_ ENSG00000145391|ENST00000274031|SETD7 24.020572477871973 0.3025672323349825 4 PYS 3 -1 24.09 0.0 0.0 1.9657 0.0 0.0 163.06321700883228 712.2772310846311 875.3404480934635 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 1.1549471895720984 0.0 PYS 1.9657 - 343 + 1 1.541 82374.9 1.0 5790 4658 10436 HBL1_DMSO_200M_050219_2,10450 HBL1_DMSO_200M_050219_2,10450,MLGSAWADCTV False False YVYPDERTAL 56.63948 613.764025866985 1086405.25 10436.0 ENSG00000145391|ENST00000274031|SETD7 0.3066936731338501 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10451 56.649 441.0 288100.0 25 0 15290.0 + 38263 QTTPVTMQV 9 158 502.7578918787116 1003.5012308242232 2 502.7589904665947 MULTI CID FTMS 0 0 0 10436 143008.84375 1.0 0 0.0 15 Unmodified _TPVTQTNFP_ ENSG00000066136|ENST00000447388|NFYC;nc|ENSG00000066136|Q13952|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF 30.63653989081413 0.1413794767160703 4 [PA]{I|L}M 4 8 20.891 0.0 0.0 2.0818 0.0 0.0 0.0 588.2756016189198 588.2756016189198 6.367800272537229 0.0 0.0 0.0 0 0.0 0.619788758288394 0.0 0.0 [PA]{I|L}M 2.0818 - 628 + 1 1.541 98148.9 1.0 5791 4658 10436 HBL1_DMSO_200M_050219_2,10451 HBL1_DMSO_200M_050219_2,10451,TPVTQTNFP False False QTTPVTMQV 56.648789 502.758990466595 1593302.75 10436.0 ENSG00000066136|ENST00000447388|NFYC;;nc|ENSG00000066136|Q13952|NFYC;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC;;nc|ENSG00000066136|Q13952-5|NFYC;;ENST00000424419.6_1_1:41157373-41232429:+|nuORF 3.969439546267192 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10452 56.663 800.0 230480.0 25 0 14315.0 + 22204 LPQPKNLTV 9 190 505.3059855502945 0 505.3047668337822 PEAK CID FTMS 0 0 0 10436 118294.953125 0.1254552986113292 -11 1.1266822814941406 16 Unmodified _LPQPKNLTV_ ENSG00000143294|ENST00000271526|PRCC 82.5293158979368 0.0120067423199408 4 P{M(Oxidation (M))|F}VT 4 7 13.264 0.0 0.0 1.3151 0.0 0.0 112.09572220763556 449.2506197565063 561.3463419641419 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0356668758921828 0.0 P{M(Oxidation (M))|F}VT 1.3151 - 454 + 1 1.541 139547.1 0.6299999952316284 5792 4658 10436 HBL1_DMSO_200M_050219_2,10452 HBL1_DMSO_200M_050219_2,10452,LPQPKNLTV True True LPQPKNLTV 56.662601 505.304766833782 25472256.0 10436.0 ENSG00000143294|ENST00000271526|PRCC 6.480612277984619 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10454 56.667 6.3 12995000.0 25 0 2479400.0 + 44662 YPFKPPKV 8 87 325.86056900573425 974.5598776174028 3 325.8603088259697 MULTI CID FTMS 0 0 0 10453 8102214.5 0.1255629104978662 -16 1.5280914306640625 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 56.144 0.0 0.0 5.7609 5.7609 89.486 0.0 0.0 0.0 15.464657591495978 8.258432407215182 8.258432407215182 36.42383702604876 0 0.2302046884880938 1.2218487496163564 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;Y[{I|L}T]KPP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T]K[HS]KV;{[HG]|PP}KK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.7609;2.0235;1.4557;1.0912;1.0407;0.53298 +;-;-;-;-;- + 246 + 1 1.548 71764.4 1.0 5793 4659 10453 HBL1_DMSO_200M_050219_2,10454 HBL1_DMSO_200M_050219_2,10454,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10455 56.668 21.0 2724000.0 25 0 613210.0 + 5080 DGYFGGARV 9 72 471.2274004870552 940.4402480409104 2 471.2274658083916 MULTI CID FTMS 0 0 0 10453 1856813.875 0.6652212834827126 1 -0.1288261413574218 2 Unmodified _DGYFGGARV_ ENSG00000044446|ENST00000379942|PHKA2;ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1 14.838274106304384 0.4350285940865338 4 {M(Oxidation (M))|F}V 2 7 13.271 0.0 0.0 1.4112 0.0 0.0 335.1109443832615 356.16816126041255 691.279105643674 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F}V 1.4112 - 73 + 1 1.548 49297.2 1.0 5794 4659 10453 HBL1_DMSO_200M_050219_2,10455 HBL1_DMSO_200M_050219_2,10455,DGYFGGARV False True DGYFGGARV 56.668372 471.227465808392 46236264.0 10453.0 nc|ENSG00000067177|P46020-2|PHKA1;;ENSG00000067177|ENST00000373542|PHKA1;;nc|ENSG00000067177|P46020-3|PHKA1;;ENSG00000044446|ENST00000379942|PHKA2 4.980033874511719 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10456 56.67 55.0 1135100.0 25 0 253270.0 + 15109 IMSHLNGAIF 10 92 368.19447723393614 1101.5616023020084 3 368.1942016482353 MULTI CID FTMS 0 0 0 10453 889957.875 0.092281402229396 38 -3.5511627197265625 3 Unmodified _IMSHLNGAIF_ REV__ENSG00000231861|ENST00000427338|OR5K2;REV__ENSG00000232382|ENST00000642057|OR5K1 12.240655878213236 0.6421556946785427 4 PQE{I|L}{M(Oxidation (M))|F} 5 -1 39.425 0.0 0.0 3.579 0.0 0.0 469.2377491681656 0.0 469.2377491681656 0.0 24.50318762307696 0.0 0.0 0 0.0 0.0 0.0 0.9247425010840048 PQE{I|L}{M(Oxidation (M))|F} 3.579 - 387 1 1.548 57090.5 1.0 5795 4659 10453 HBL1_DMSO_200M_050219_2,10456 HBL1_DMSO_200M_050219_2,10456,IMSHLNGAIF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10457 56.671 53.0 1157300.0 25 0 218070.0 + 22811 IVSAQNLLK 9 80 493.3055715996474 984.5965902660948 2 493.3054382205009 MULTI CID FTMS 0 0 0 10453 766739.4375 0.846554383725727 -1 0.0976409912109375 4 Unmodified _LRDELVKL_ nc|ENSG999|O00370|L1_ORF2;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense 26.88365393820708 0.4786498634179528 4 {I|L}V 2 6 45.217 0.0 0.0 4.5924 0.0 0.0 0.0 769.422005951728 769.422005951728 17.769250191953674 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}V 4.5924 + + 177 + 1 1.548 54066.6 1.0 5796 4659 10453 HBL1_DMSO_200M_050219_2,10457 HBL1_DMSO_200M_050219_2,10457,LRDELVKL False False IVSAQNLLK 56.671136 493.305438220501 6950887.5 10453.0 nc|ENSG999|O00370|L1_ORF2;;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;;L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense 0.734100858370463 2.0 False 9.0 True ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 10458 56.675 183.0 252850.0 25 0 21404.0 + 35753 SVIEQGGIQTV 11 83 565.8060903228255 1129.597627712451 2 565.8064453005791 MULTI CID FTMS 0 0 0 10453 359166.375 0.3534705505484621 2 -0.1980781555175781 5 Unmodified _SVIEQGGIQTV_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000562423.5_1_15:29046609-29050027:+|nuORF;ENST00000566321.5_1_15:29046634-29050027:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 36.506200033944 0.2662161991516171 4 [VS]{I|L}E 4 7 29.041 0.0 0.0 2.5709 0.0 0.0 0.0 698.346412462704 698.346412462704 1.988927071389739 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [VS]{I|L}E 2.5709 + + 412 1 1.548 43536.3 1.0 5797 4659 10453 HBL1_DMSO_200M_050219_2,10458 HBL1_DMSO_200M_050219_2,10458,SVIEQGGIQTV False True SVIEQGGIQTV 56.674682 565.806445300579 16473006.0 10453.0 ENST00000566321.5_1_15:29046634-29050027:+|nuORF;;ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;;ENST00000562423.5_1_15:29046609-29050027:+|nuORF 7.118587811787923 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10459 56.677 82.0 520130.0 25 0 43082.0 + 4603 DAYTHPQFV 9 70 539.2534588118743 1076.4923646905486 2 539.2504760622978 MULTI CID FTMS 0 0 0 10453 330669.25 0.0714417891880178 3 -0.3249740600585937 6 Unmodified _DAYTHPQFV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000431492.2_1_1:192216230-192216602:-|nuORF;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 49.93300154707207 0.0405168250806675 4 {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F}V 9 0 + 53.719 0.0 0.0 4.9902 4.9902 85.93 0.0 0.0 0.0 36.60560382914127 12.252684618815088 12.252684618815088 31.13601480829353 0 1.274227503252014 2.0 0.4247425010840047 0.3807196863200844 + + {[DA]|[EG]}Y[HT][QP]{M(Oxidation (M))|F}V;{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}[QP]W{M(Oxidation (M))|F}V;[HT]Y{[DA]|[EG]}[QP]{M(Oxidation (M))|F}V;[HT]Y[QP]{[DA]|[EG]}{M(Oxidation (M))|F}V 4.9902;2.0978;1.2837;1.0989 +;-;-;- + 78 + 1 1.548 42131.1 1.0 5798 4659 10453 HBL1_DMSO_200M_050219_2,10459 HBL1_DMSO_200M_050219_2,10459,DAYTHPQFV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10460 56.682 281.0 247050.0 25 0 27904.0 + -1 VYITGHPQGPSAL 13 100 670.3535937146245 1338.6926344960489 2 670.3536865115166 MULTI CID FTMS 0 0 0 10453 264526.40625 0.4856582186407356 2 -0.1980781555175781 7 Oxidation (M) _VYLGRDKTM(Oxidation (M))QL_ ENST00000477648.1_1_9:103064475-103066198:-|nuORF;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 36.506200033944 0.2662161991516171 4 VY{I|L}TGH[QP]G[PS]A{I|L} 13 -1 + 111.91 0.0 0.0 8.3599 8.3599 96.217 0.0 0.0 0.0 72.9459130590017 15.13692900244817 15.13692900244817 21.237125054200234 0 2.205112052208703 2.0 1.337180496500464 0.3807196863200844 VY{I|L}TGH[QP]G[PS]A{I|L};VY{I|L}TGH[QP]G[TA][VP];VY{I|L}T[TA]G[KG]WM{I|L};VY{I|L}T[TA]{[QN]|[E{I|L}]|[KN]}WM{I|L};VY{I|L}TG[TA][KG]WM{I|L};VY{I|L}T[DP]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M{I|L};VY{I|L}TGH[QP][QT][VP];VY{I|L}T[QT][KG]WM{I|L};VY{I|L}T[DP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}M{I|L};VY{I|L}T[TA][WE]{I|L}M{I|L} 8.3599;6.7735;6.2951;6.251;6.1544;6.1047;6.0491;6.0261;5.7779;5.6822 -;-;-;-;-;-;-;-;-;- 2259 + 1 1.548 57312.2 1.0 5799 4659 10453 HBL1_DMSO_200M_050219_2,10460 HBL1_DMSO_200M_050219_2,10460,VYLGRDKTMQL False False VYITGHPQGPSAL 56.681723 670.353686511517 10436756.0 10453.0 ENST00000477648.1_1_9:103064475-103066198:-|nuORF;;ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 9.683883984883629 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10461 56.687 261.0 378040.0 25 0 38689.0 + -1 DCGLIRFAEV 10 124 582.7910956129934 1163.5676382927868 2 582.7922851443291 MULTI CID FTMS 0 0 0 10453 254566.640625 1.0 0 0.0 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))DCGLIRFAEV_ REV__ENST00000568641.1_1_17:5403661-5403694:-|nuORF 10.073929032068715 0.6785112666868882 4 {[YC]|[HE]}DY{M(Oxidation (M))|F}E{I|L}{I|L}V 9 -1 + 37.59 0.0 0.0 3.2305 3.2305 66.509 0.0 0.0 0.0 5.404014870683646 19.529868289324018 5.404014870683646 2.5578094971178444 0 0.3252574989159953 0.0 0.8473349592275301 0.0 {[YC]|[HE]}DY{M(Oxidation (M))|F}E{I|L}{I|L}V;{[YC]|[HE]}DYE{M(Oxidation (M))|F}{I|L}{I|L}V;{[YC]|[HE]}D{M(Oxidation (M))|F}YE{I|L}{I|L}V;{[YC]|[HE]}YD{M(Oxidation (M))|F}E{I|L}{I|L}V;[PA]N{M(Oxidation (M))|F}D{M(Oxidation (M))|F}E{I|L}{I|L}V;[YE]HD{M(Oxidation (M))|F}E{I|L}{I|L}V;{[YC]|[HE]}YDE{M(Oxidation (M))|F}{I|L}{I|L}V;[PA]N{M(Oxidation (M))|F}DE{M(Oxidation (M))|F}{I|L}{I|L}V;[YE]HDE{M(Oxidation (M))|F}{I|L}{I|L}V;[PA]GG{M(Oxidation (M))|F}D{M(Oxidation (M))|F}E{I|L}{I|L}V 3.2305;3.0107;2.8205;2.3942;2.3334;2.2288;2.1743;2.1136;2.009;1.5458 -;-;-;-;-;-;-;-;-;- 756 1 1.548 76141.5 1.0 5800 4659 10453 HBL1_DMSO_200M_050219_2,10461 HBL1_DMSO_200M_050219_2,10461,DCGLIRFAEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10462 56.689 98.0 530800.0 25 0 26091.0 37938 TMAGTVWWV 9 106 525.7578880377185 1049.501223142237 2 526.2625610232353 MULTI CID FTMS 0 0 0 10453 268626.40625 0.3807785702698898 2 -0.1980781555175781 9 Unmodified _TMAGTVWWV_ ENSG00000164930|ENST00000358755|FZD6;ENST00000521195.1_1_8:104320096-104343734:+|nuORF;nc|ENSG00000164930|O60353-2|FZD6 18.13498045792455 0.3457906370836843 4 [MT]Q{M(Oxidation (M))|F} 4 7 29.425 0.0 0.0 2.8037 0.0 0.0 0.0 539.2620318182713 539.2620318182713 10.841892687338683 0.0 0.0 0.0 0 0.0 1.0 0.6237125054200234 0.0 [MT]Q{M(Oxidation (M))|F} 2.8037 - 446 1 1.548 46372.2 1.0 5801 4659 10453 HBL1_DMSO_200M_050219_2,10462 HBL1_DMSO_200M_050219_2,10462,TMAGTVWWV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10463 56.703 800.0 208640.0 25 0 16964.0 + 16346 IYMEPEKQVM 10 142 634.3062582137553 1266.5979634943103 2 634.3068115115166 MULTI CID FTMS 0 0 0 10453 215577.71875 0.9281779812383508 -1 0.0976409912109375 10 Unmodified _IYMEPEKQVM_ ENSG00000133706|ENST00000394434|LARS1;ENST00000508667.5_1_5:145522961-145531505:-|nuORF;nc|ENSG00000133706|Q9P2J5-2|LARS1 93.93812099017352 0.0090513810409226 4 {I|L}YMEPEKQVM 10 0 + 89.282 0.0 0.0 7.049 7.049 85.186 0.0 0.0 0.0 5.529644954411808 5.529644954411808 5.529644954411808 5.529644954411808 0 2.5924778212679485 2.0 0.75 0.5994850021680094 + + {I|L}YMEPEKQVM;[EP]KQVEMY{I|L}M;[EP]KQEMY{I|L}VM;[EP]KQEMVY{I|L}M;[EP]KQVMEY{I|L}M;[EP]KQEVMY{I|L}M;[EP]K[AG]VEMY{I|L}M;{I|L}YMEP[VS]AQVM;{I|L}YMEPEKQMV;[EP]K[AG]EMY{I|L}VM 7.049;6.6124;6.3142;6.2559;6.0988;5.917;5.8888;5.8097;5.7493;5.5907 +;-;-;-;-;-;-;-;-;- + 5894 + 1 1.548 125736.7 0.959999978542328 5802 4659 10453 HBL1_DMSO_200M_050219_2,10463 HBL1_DMSO_200M_050219_2,10463,IYMEPEKQVM True True IYMEPEKQVM 56.702548 634.306811511517 2170422.25 10453.0 nc|ENSG00000133706|Q9P2J5-2|LARS1;;ENSG00000133706|ENST00000394434|LARS1;;ENST00000508667.5_1_5:145522961-145531505:-|nuORF 7.755855560302734 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10464 56.709 357.0 361920.0 25 0 31042.0 + 32392 RYSEYAEEF 9 96 597.2591544266127 1192.5037559200252 2 597.2595092654228 MULTI CID FTMS 0 0 0 10453 204951.84375 0.1798458567270147 -2 0.1977119445800781 11 Unmodified _RYSEYAEEF_ ENSG00000139505|ENST00000381801|MTMR6 36.506200033944 0.094635877243972 4 [YR]{[ES]|[DT]|[{I|L}C]}YAEE{M(Oxidation (M))|F} 9 0 + 50.524 0.0 0.0 4.2368 4.2368 77.227 0.0 0.0 0.0 1.0552934292147145 6.952804188398872 1.0552934292147145 9.013553111951886 0 0.8807196863200843 0.0 0.0 0.7614393726401688 + + [YR]{[ES]|[DT]|[{I|L}C]}YAEE{M(Oxidation (M))|F};EE{M(Oxidation (M))|F}[YR]{[CA]|SS}E{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]E[YR]{[CA]|SS}E{M(Oxidation (M))|F} 4.2368;3.481;3.0318 +;-;- + 313 1 1.548 98535.8 1.0 5803 4659 10453 HBL1_DMSO_200M_050219_2,10464 HBL1_DMSO_200M_050219_2,10464,RYSEYAEEF True True RYSEYAEEF 56.70899 597.259509265423 19394804.0 10453.0 ENSG00000139505|ENST00000381801|MTMR6 4.9324014981587725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10465 56.713 206.0 243730.0 25 0 13058.0 + 24937 MPPPPLQHV 9 94 508.2744098525481 1014.534266771896 2 508.2741882205009 MULTI CID FTMS 0 0 0 10453 163584.1875 0.1537425141962417 11 -0.8056449890136719 12 Unmodified _MPPPPLQHV_ ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1 30.22481116460888 0.1466181017706357 4 {NN|[MP]|[D{I|L}]|[EV]}PP[W{M(Oxidation (M))|F}]K{I|L} 8 5 + 28.293 0.0 0.0 2.7888 2.7888 78.862 0.0 0.0 0.0 6.329175771389615 5.985994592184554 5.985994592184554 28.29312592315027 0 0.6109243748081782 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PP[W{M(Oxidation (M))|F}]K{I|L} 2.7888 - 155 + 1 1.548 46420.6 1.0 5804 4659 10453 HBL1_DMSO_200M_050219_2,10465 HBL1_DMSO_200M_050219_2,10465,MPPPPLQHV False True MPPPPLQHV 56.712909 508.274188220501 10780963.0 10453.0 ENSG00000105879|ENST00000440859|CBLL1;;nc|ENSG00000105879|Q75N03-2|CBLL1 8.160040378570557 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10466 56.727 800.0 142810.0 25 0 9549.3 -1 0 117 881.4212996312424 0 881.4223510622978 PEAK CID FTMS 0 0 0 10453 147571.640625 0.9273725874488424 2 -0.1980781555175781 13 4 PN{I|L}NQAER 8 -1 53.085 0.0 0.0 3.0148 0.0 0.0 261.0821383485232 574.2645968072874 835.3467351558106 0.0 0.0 0.0 0.0 0 1.274227503252014 0.0 0.0 0.4247425010840047 PN{I|L}NQAER 3.0148 - 1320 + 1 1.548 81605.4 0.699999988079071 5805 4659 10453 HBL1_DMSO_200M_050219_2,10466 HBL1_DMSO_200M_050219_2,10466, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10467 56.742 800.0 138670.0 25 0 9006.6 14439 IFQHCFYKSL 10 138 643.3251473374514 1284.6357417417028 2 643.3258544802666 MULTI CID FTMS 0 0 0 10453 141434.703125 1.0 0 0.0 14 Unmodified _IFQHCFYKSL_ ENST00000510714.1_1_5:466550-472987:-|nuORF 24.020572477871973 0.4289996903560794 4 KY{M(Oxidation (M))|F}D{M(Oxidation (M))|F}S{I|L}{M(Oxidation (M))|F} 8 8 62.146 0.0 0.0 4.8377 0.0 0.0 0.0 234.08851038150627 234.08851038150627 26.87720544816908 0.0 0.0 0.0 0 1.6307196863200843 0.0 0.0 0.0 KY{M(Oxidation (M))|F}D{M(Oxidation (M))|F}S{I|L}{M(Oxidation (M))|F} 4.8377 - 4123 + 1 1.548 87994.5 0.7799999713897705 5806 4659 10453 HBL1_DMSO_200M_050219_2,10467 HBL1_DMSO_200M_050219_2,10467,IFQHCFYKSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10468 56.756 800.0 206510.0 25 0 14117.0 + -1 MCFDAFSLNCM 11 147 685.7499676702942 1369.4853824073882 2 686.2531616091728 MULTI CID FTMS 0 0 0 10453 113689.9609375 0.006734291215606 -8 0.83172607421875 15 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))FDAFSLNCM(Oxidation (M))_ REV__ENSG00000138039|ENST00000294954|LHCGR;REV__nc|ENSG00000138039|P22888-2|LHCGR 5.731851221503515 0.8481046878870278 4 SSADNY[YR] 8 -1 43.849 0.0 0.0 3.2019 0.0 0.0 395.0968189923844 0.0 395.0968189923844 0.0 28.77758779335053 0.0 0.0 0 0.5 0.0 1.5 0.0 SSADNY[YR] 3.2019 - 484 1 1.548 122737.6 0.7300000190734863 5807 4659 10453 HBL1_DMSO_200M_050219_2,10468 HBL1_DMSO_200M_050219_2,10468,MCFDAFSLNCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10469 56.769 800.0 84632.0 25 0 18843.0 -1 0 55 1130.4669781244183 3388.3791049734555 3 1130.802416980267 MULTI CID FTMS 0 0 0 10453 116578.875 1.0 0 0.0 16 4 EVTQ{I|L}GG 7 -1 14.914 0.0 0.0 0.44015 0.0 0.0 2147.7471426194907 553.2627047174436 2701.0098473369344 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EVTQ{I|L}GG 0.44015 - 133 + 1 1.548 61127.8 0.4900000095367431 5808 4659 10453 HBL1_DMSO_200M_050219_2,10469 HBL1_DMSO_200M_050219_2,10469, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10470 56.778 390.0 265530.0 25 0 25271.0 + 44093 YIYHGTVKL 9 152 547.3065305064215 0 547.3066894412041 PEAK CID FTMS 0 0 0 10453 87216.0 1.0 0 0.0 17 Unmodified _YIYHGTVKL_ ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4 41.8396318013385 0.053988301646488 4 TDV 3 8 16.44 0.0 0.0 1.5047 0.0 0.0 115.1206771243679 659.3148897760374 774.4355669004053 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 TDV 1.5047 - 399 + 1 1.548 83290.7 1.0 5809 4659 10453 HBL1_DMSO_200M_050219_2,10470 HBL1_DMSO_200M_050219_2,10470,YIYHGTVKL True True YIYHGTVKL 56.77764 547.306689441204 643657.1875 10453.0 nc|ENSG00000123444|Q9NVX7-1|KBTBD4;;ENSG00000123444|ENST00000430070|KBTBD4;;nc|ENSG00000123444|Q9NVX7-3|KBTBD4 1.8004584312438965 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10471 56.791 800.0 191960.0 25 0 9914.4 + 4530 DAYNSLSSTV 10 191 528.7455952874957 0 528.7454101443291 PEAK CID FTMS 0 0 0 10453 86621.875 0.7823800085099597 -1 0.0976409912109375 18 Unmodified _DAYNSLSSTV_ ENSG00000139626|ENST00000267082|ITGB7;nc|ENSG00000139626|P26010-2|ITGB7 39.94969957227396 0.1110137703778733 4 A{I|L} 2 8 10.969 0.0 0.0 1.0393 0.0 0.0 644.2278716279226 224.10433374576408 868.3322053736866 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L} 1.0393 - 209 + 1 1.548 124445.5 0.5400000214576721 5810 4659 10453 HBL1_DMSO_200M_050219_2,10471 HBL1_DMSO_200M_050219_2,10471,DAYNSLSSTV True True DAYNSLSSTV 56.791471 528.745410144329 1030780.4375 10453.0 nc|ENSG00000139626|P26010-2|ITGB7;;ENSG00000139626|ENST00000267082|ITGB7 3.6605323950449615 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10473 56.796 22.0 1874100.0 25 0 174830.0 + 4016 DALRSGLTV 9 76 466.2639604463565 930.5133679595132 2 466.2642089724541 MULTI CID FTMS 0 0 0 10472 2351395.25 0.011938550136569 6 -0.3343162536621094 1 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 29.84058131909904 0.1515068451768857 4 V{M(Oxidation (M))|F}[WR][QP]V 7 7 + 50.233 0.0 0.0 5.3985 5.3985 84.902 0.0 0.0 0.0 15.457122609743196 9.163413326259118 9.163413326259118 11.470004166521257 0 0.4247425010840047 2.0 0.0 0.0 V{M(Oxidation (M))|F}[WR][QP]V;{[DA]|[EG]}{I|L}R[SG]{I|L}TV;{[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[DA]|[EG]}{I|L}R[KT]EV;{[SA]|[TG]}[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV 5.3985;4.1658;3.9089;2.6088;2.5107 -;+;-;-;- + 259 + 1 1.556 37851.9 1.0 5811 4660 10472 HBL1_DMSO_200M_050219_2,10473 HBL1_DMSO_200M_050219_2,10473,DALRSGLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10474 56.797 30.0 1640000.0 25 0 102150.0 -1 TIQMAMGTI 9 97 499.2366354834408 996.4587180336816 2 499.2366515994072 MULTI CID FTMS 0 0 0 10472 453571.4375 0.2273127148653259 5 -0.2872047424316406 2 2 Oxidation (M) _TIQM(Oxidation (M))AM(Oxidation (M))GTI_ ENST00000531673.5_1_11:112099351-112106686:+|nuORF 15.847184025352805 0.4077185912009129 4 T{I|L} 2 -1 19.253 0.0 0.0 1.9321 0.0 0.0 764.3157564631722 0.0 764.3157564631722 0.0 2.218487496163561 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 T{I|L} 1.9321 + + 419 + 1 1.556 45043.0 1.0 5812 4660 10472 HBL1_DMSO_200M_050219_2,10474 HBL1_DMSO_200M_050219_2,10474,TIQMAMGTI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10475 56.798 17.0 3165800.0 25 0 260820.0 + 4621 DAYTVQQL 8 78 469.23519785925913 936.4558427853184 2 469.2349426150322 MULTI CID FTMS 0 0 0 10472 3194136.25 0.9587715070905992 -1 0.1288261413574218 3 Unmodified _DAYTVQQL_ ENSG00000055130|ENST00000325222|CUL1 46.92087301778293 0.1537303740847981 4 {[DA]|[EG]}YTV 5 3 41.682 0.0 0.0 4.4511 0.0 0.0 0.0 384.1875071742433 384.1875071742433 19.665470151068707 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.0 0.0 + {[DA]|[EG]}YTV 4.4511 + + 182 1 1.556 47670.9 1.0 5813 4660 10472 HBL1_DMSO_200M_050219_2,10475 HBL1_DMSO_200M_050219_2,10475,DAYTVQQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10476 56.8 19.0 6341300.0 25 0 1202700.0 + 7942 ELRRVVKLL 9 74 375.9203731282357 1124.7392899849071 3 375.9201843142509 MULTI CID FTMS 0 0 0 10472 2387240.0 0.6478713750447368 -1 0.1288261413574218 4 Unmodified _ELRRVVKLL_ REV__ENSG00000196090|ENST00000373187|PTPRT;REV__nc|ENSG00000196090|O14522-1|PTPRT 12.872603262515298 0.4882369880199512 4 V{I|L}{I|L} 3 -1 30.93 0.0 0.0 2.75 0.0 0.0 781.4925974867979 0.0 781.4925974867979 0.0 13.182955476022894 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 V{I|L}{I|L} 2.75 - 34 1 1.556 100481.8 1.0 5814 4660 10472 HBL1_DMSO_200M_050219_2,10476 HBL1_DMSO_200M_050219_2,10476,ELRRVVKLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10477 56.801 42.0 1469600.0 25 0 97039.0 + + 37736 TARPLVQTI 9 103 499.8036215756889 997.5926902181778 2 499.8039733767509 MULTI CID FTMS 0 0 0 10472 1208058.75 0.4075020412059652 -4 0.4628143310546875 5 Unmodified _TLQRLAPLS_ ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C 25.399314129420983 0.2080152500878129 4 [TA]RP{I|L}VQT{I|L} 9 -1 + 44.09 0.0 0.0 4.4196 4.4196 79.22 0.0 0.0 0.0 10.457353338093718 18.37137929826984 10.457353338093718 9.208187539523747 0 0.8182503180159344 0.958607314841775 0.0 0.0 [TA]RP{I|L}VQT{I|L};[TA]RP{I|L}V[AG]T{I|L};[TA]RP{I|L}VAAS{I|L};[{I|L}T]{I|L}[PG]RQT{I|L};[TA]RP{I|L}AAVS{I|L};[TA]RP{I|L}[Q{I|L}]S{I|L};[TA]RP{I|L}[KA]E{I|L};[{I|L}T][PG][R{I|L}]QT{I|L};[{I|L}T]{I|L}[PG]R[AG]T{I|L};{[TV]|[{I|L}S]}PA[R{I|L}]QT{I|L} 4.4196;3.4966;2.8176;2.758;2.5159;2.1628;2.0388;1.909;1.835;1.7567 -;-;-;-;-;-;-;-;-;- 658 1 1.556 52117.6 1.0 5815 4660 10472 HBL1_DMSO_200M_050219_2,10477 HBL1_DMSO_200M_050219_2,10477,TLQRLAPLS False False TARPLVQTI 56.800735 499.803973376751 56819028.0 10472.0 ENSG00000142945|ENST00000372224|KIF2C;;nc|ENSG00000142945|Q99661-2|KIF2C 4.39278777440389 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10478 56.802 43.0 1168000.0 25 0 183230.0 + 12232 GQVPPLQSV 9 84 462.7611985671394 923.5078442010788 2 462.7612792849541 MULTI CID FTMS 0 0 0 10472 1143814.5 0.7313889980359916 -3 0.3265380859375 6 Unmodified _GQVPPLQSV_ ENSG00000106351|ENST00000300176|AGFG2 53.832793166522166 0.0319663582346103 4 [AG]GVPP{I|L}QSV 10 2 [AG]GV + + 33.746 17.747 6.2456 3.6541 3.6541 47.607 0.0 0.0 0.0 0.0 2.168956102135056 0.0 0.0 0 1.048455006504028 0.0 0.75 0.2396518287104437 [AG]GVPP{I|L}QSV 3.6541 - 218 + 1 1.556 43160.1 1.0 5816 4660 10472 HBL1_DMSO_200M_050219_2,10478 HBL1_DMSO_200M_050219_2,10478,GQVPPLQSV True True GQVPPLQSV 56.801931 462.761279284954 73380294.0 10472.0 ENSG00000106351|ENST00000300176|AGFG2 6.419662793477376 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10479 56.803 66.0 1811400.0 25 0 227960.0 + 36567 TALKIMKV 8 112 301.86160933573194 902.562998607396 3 301.8611938357353 MULTI CID FTMS 0 0 0 10472 909111.9375 0.0916244904078249 -3 0.3265380859375 7 Unmodified _TALKIMKV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 41.8396318013385 0.2035142800366642 4 TA{I|L}K{I|L}MKV 8 0 + 76.355 0.0 0.0 8.4597 8.4597 81.705 0.0 0.0 0.0 31.638568026386693 1.5126767533064935 1.5126767533064935 1.5126767533064935 0 0.3054621874040891 1.5228787452803376 0.0 0.6747425010840047 + + TA{I|L}K{I|L}MKV;TA{I|L}K{I|L}MVK 8.4597;8.2921 +;- + 218 + 1 1.556 101741.3 1.0 5817 4660 10472 HBL1_DMSO_200M_050219_2,10479 HBL1_DMSO_200M_050219_2,10479,TALKIMKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10480 56.806 116.0 659050.0 25 0 67580.0 + 31242 RLTEEFQNV 9 106 568.290500146283 1134.5664473593658 2 568.2908813357353 MULTI CID FTMS 0 0 0 10472 558098.3125 0.3822292728512979 -3 0.3265380859375 8 Unmodified _RLTEEFQNV_ ENSG00000122687|ENST00000242257|MRM2;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;ENST00000486040.1_1_7:2274759-2277695:-|nuORF 36.506200033944 0.094635877243972 4 DQ{M(Oxidation (M))|F}EE[RP]V 8 6 49.487 0.0 0.0 4.3618 0.0 0.0 116.08880934493511 0.0 116.08880934493511 0.0 33.62350429976899 0.0 0.0 0 0.5 0.0 0.6747425010840047 0.805462187404089 DQ{M(Oxidation (M))|F}EE[RP]V 4.3618 - 399 + 1 1.556 65337.1 1.0 5818 4660 10472 HBL1_DMSO_200M_050219_2,10480 HBL1_DMSO_200M_050219_2,10480,RLTEEFQNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10481 56.809 138.0 493770.0 25 0 45856.0 + 9959 FPGKHFQEI 9 100 551.7875691100098 1101.5605852868196 2 551.7877685427666 MULTI CID FTMS 0 0 0 10472 359339.0 0.0767282098345365 39 -3.603336334228516 9 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 53.40400417844725 0.0329064971918313 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E 9 3 + 58.438 0.0 0.0 5.3051 5.3051 82.765 0.0 0.0 0.0 13.721639234679015 45.3394101957943 13.721639234679015 9.208187539523747 0 0.9247425010840048 1.6989700043360187 0.8807196863200843 0.7742275032520141 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[AG]{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H[YK]PE;[KG]P{M(Oxidation (M))|F}HQ{M(Oxidation (M))|F}{I|L}E;{M(Oxidation (M))|F}PYQ[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}PY[YK]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KG]P{M(Oxidation (M))|F}H[YK]PE;[KG]P{M(Oxidation (M))|F}H[AG]{M(Oxidation (M))|F}{I|L}E;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Q[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KG]PW{[CT]|[{M(Oxidation (M))|F}G]}[KG]PE 5.3051;4.4691;3.7251;3.548;3.2702;3.2586;2.8255;2.712;2.6964;2.6924 -;-;-;-;-;-;-;-;-;- 1077 1 1.556 59086.8 1.0 5819 4660 10472 HBL1_DMSO_200M_050219_2,10481 HBL1_DMSO_200M_050219_2,10481,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10482 56.811 111.0 306580.0 25 0 35805.0 + 19346 LENWGARLL 9 77 536.3016077265758 1070.5886625199514 2 536.8032104372978 MULTI CID FTMS 0 0 0 10472 335950.625 1.0 0 0.0 10 Unmodified _LENWGARLL_ REV__ENSG00000143171|ENST00000359842|RXRG;REV__ENSG00000186350|ENST00000481739|RXRA;REV__ENSG00000204231|ENST00000374680|RXRB;REV__nc|ENSG00000186350|P19793-2|RXRA;REV__nc|ENSG00000204231|P28702-3|RXRB 25.399314129420983 0.2080152500878129 4 [{I|L}A]GD 4 -1 24.508 0.0 0.0 2.2892 0.0 0.0 0.0 711.3962851608295 711.3962851608295 4.559097988984217 0.0 0.0 0.0 0 0.0 0.958607314841775 0.5 0.0 [{I|L}A]GD 2.2892 - 145 1 1.556 35372.7 1.0 5820 4660 10472 HBL1_DMSO_200M_050219_2,10482 HBL1_DMSO_200M_050219_2,10482,LENWGARLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10483 56.816 294.0 490460.0 25 0 51668.0 18099 KTKGAGGG 8 154 338.19400579686885 674.3734586605377 2 338.1932861208916 MULTI CID FTMS 0 0 0 10472 335013.78125 0.0929409485135261 -3 0.3265380859375 11 Unmodified _KTKGAGGG_ ENST00000585091.1_1_17:79977515-79980737:-|nuORF 0.0 0.8243325171867699 4 V 1 8 8.2488 0.0 0.0 1.2232 0.0 0.0 557.2940499464737 0.0 557.2940499464737 0.0 6.259059864968997 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2232 - 12 + 1 1.556 116919.0 1.0 5821 4660 10472 HBL1_DMSO_200M_050219_2,10483 HBL1_DMSO_200M_050219_2,10483,KTKGAGGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10484 56.828 676.0 498950.0 25 0 170420.0 31083 RLLDRKVLL 9 151 563.377019843055 1124.73948675291 2 563.3768188357353 MULTI CID FTMS 0 0 0 10472 318145.25 0.7228534677575331 -1 0.1288261413574218 12 Unmodified _RLLDRKVLL_ ENSG00000143457|ENST00000271732|GOLPH3L 22.774965066869 0.2414061210083823 4 {I|L}RE 3 7 30.278 0.0 0.0 2.692 0.0 0.0 0.0 723.4891810177922 723.4891810177922 16.008833994680423 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.4247425010840047 0.0 {I|L}RE 2.692 - 150 + 1 1.556 255673.1 1.0 5822 4660 10472 HBL1_DMSO_200M_050219_2,10484 HBL1_DMSO_200M_050219_2,10484,RLLDRKVLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10485 56.833 259.0 738350.0 25 0 66469.0 + 41669 VPQSHMPEI 9 155 519.2573958520906 1036.500238770981 2 519.2581054568291 MULTI CID FTMS 0 0 0 10472 319767.09375 0.2899858052848278 -9 0.960552215576172 13 Unmodified _VPQSHMPEI_ ENSG00000196712|ENST00000358273|NF1;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-3|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-5|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.H1962Pfs*2|1|0.23|ENSG00000196712|chr17:31334908-31334909|-/C|frameshift_variant 45.69961567697781 0.0497987121815769 4 VPQ[HS]MEP{I|L} 9 2 + 38.543 0.0 0.0 3.7186 3.7186 63.736 0.0 0.0 0.0 11.839114086095124 4.75745152038558 4.75745152038558 0.4288638382695211 0 1.3539171939081172 1.2218487496163564 0.6307196863200843 0.0 VPQ[HS]MEP{I|L};VPQ{[MS]|[{M(Oxidation (M))|F}A]}HEP{I|L};V[WE]QHEP{I|L};VC(Carbamidomethyl (C))V[PS]HEP{I|L};[EP]EQ[WH]V{I|L};VC(Carbamidomethyl (C))[PS]VHEP{I|L};[TP][HN]MVEP{I|L};[EP]EQ[WH]{I|L}V;[WD]{I|L}QHEP{I|L};V[WE]RT{M(Oxidation (M))|F}S{I|L} 3.7186;3.6772;3.149;3.1168;2.8941;2.7328;2.6387;2.5968;2.5448;2.5372 -;-;-;-;-;-;-;-;-;- 1698 + 1 1.556 148632.5 1.0 5823 4660 10472 HBL1_DMSO_200M_050219_2,10485 HBL1_DMSO_200M_050219_2,10485,VPQSHMPEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10486 56.836 149.0 726130.0 25 0 58003.0 + 44137 YLDPAQQNL 9 144 531.2664098941002 1060.5182668550003 2 531.2659179568291 MULTI CID FTMS 0 0 0 10472 281758.5 0.2955876223335545 -3 0.3265380859375 14 Unmodified _YLDPAQQNL_ ENST00000421406.1_1_1:247353282-247372753:-|nuORF 56.17704186161178 0.0281986971544335 4 [Y{I|L}]DPAQQN{I|L} 9 0 + 53.808 0.0 0.0 5.0737 5.0737 81.786 0.0 0.0 0.0 13.835974616874566 6.751736484954378 6.751736484954378 9.208187539523747 0 1.146591250700361 2.0 0.0 0.0 + + [Y{I|L}]DPAQQN{I|L};[Y{I|L}]DPA[AG]QN{I|L};[Y{I|L}]DPAQ[AG]N{I|L};[Y{I|L}]PDAQQN{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPAQQN{I|L};[Y{I|L}]DPA[AG][AG]N{I|L};[Y{I|L}]PDA[AG]QN{I|L};[Y{I|L}]PDAQ[AG]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPA[AG]QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPAQ[AG]N{I|L} 5.0737;4.2054;4.2054;3.8523;3.7691;3.3413;2.984;2.984;2.9008;2.9008 +;-;-;-;-;-;-;-;-;- + 1735 1 1.556 85388.6 1.0 5824 4660 10472 HBL1_DMSO_200M_050219_2,10486 HBL1_DMSO_200M_050219_2,10486,YLDPAQQNL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10487 56.839 174.0 476340.0 25 0 50093.0 + 45487 YTLREVDTV 9 108 548.28822999682 1094.5619070604398 2 548.2877685427666 MULTI CID FTMS 0 0 0 10472 286502.90625 0.3182372238665777 -2 0.2264671325683593 15 Unmodified _YTLREVDTV_ ENSG00000106268|ENST00000356714|NUDT1;nc|ENSG00000106268|P36639-1|NUDT1;nc|ENSG00000106268|P36639-2|NUDT1;nc|ENSG00000106268|P36639-3|NUDT1 63.22749603027936 0.0242951379232427 4 YTPV[VP]GYTV 10 5 + 75.187 0.0 0.0 6.8692 6.8692 85.562 0.0 0.0 0.0 6.407589708565638 6.407589708565638 6.407589708565638 6.407589708565638 0 1.6237125054200234 1.6989700043360187 1.0356668758921828 0.0 YTPV[VP]GYTV;[YT]{I|L}REVDTV;YTPV[VP]GYS{I|L};{[TV]|[{I|L}S]}D{[RE]|[WV]}{I|L}YTV;{NN|[MP]|[D{I|L}]|[EV]}S{[RE]|[WV]}{I|L}YTV;{[ES]|[DT]|[{I|L}C]}V{[TV]|[{I|L}S]}PTYTV;{[TV]|[{I|L}S]}D{[RE]|[WV]}{I|L}TYV;{[ES]|[DT]|[{I|L}C]}V{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VDTV;{[ES]|[DT]|[{I|L}C]}V{[RE]|[WV]}{I|L}YTV;{NN|[MP]|[D{I|L}]|[EV]}S{[RE]|[WV]}{I|L}TYV 6.8692;6.2838;5.6403;4.823;4.4486;4.1552;4.0799;4.0189;3.8946;3.7055 -;+;-;-;-;-;-;-;-;- + 1027 + 1 1.556 72618.4 1.0 5825 4660 10472 HBL1_DMSO_200M_050219_2,10487 HBL1_DMSO_200M_050219_2,10487,YTLREVDTV True True YTLREVDTV 56.839414 548.287768542767 12742171.0 10472.0 nc|ENSG00000106268|P36639-2|NUDT1;;nc|ENSG00000106268|P36639-1|NUDT1;;nc|ENSG00000106268|P36639-3|NUDT1;;ENSG00000106268|ENST00000356714|NUDT1 6.673957665761312 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10488 56.842 122.0 529630.0 25 0 46141.0 + -1 MLVSLYVFP 9 90 542.7934218667502 1083.5722908003004 2 542.7895995974541 MULTI CID FTMS 0 0 0 10472 265951.9375 0.0143574959403052 48 -4.475727081298828 16 Oxidation (M) _M(Oxidation (M))LVSLYVFP_ REV__ENSG00000178966|ENST00000445877|RMI1 16.942295170755138 0.3780752226737986 4 YPP 3 -1 50.005 0.0 0.0 4.6148 0.0 0.0 0.0 723.3789360425711 723.3789360425711 37.78659694992122 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 YPP 4.6148 - 99 + 1 1.556 56867.0 1.0 5826 4660 10472 HBL1_DMSO_200M_050219_2,10488 HBL1_DMSO_200M_050219_2,10488,MLVSLYVFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10489 56.85 367.0 208770.0 25 0 11424.0 + 2160 AQAEDMNVKL 10 132 559.7787540010637 1117.5429550689273 2 559.7796508669853 MULTI CID FTMS 0 0 0 10472 204867.578125 1.0 0 0.0 17 Unmodified _AQAEDMNVKL_ ENSG00000156030|ENST00000423556|MIDEAS;nc|ENSG00000156030|Q6PJG2|MIDEAS 27.22323531849824 0.3570408936368626 4 [QA]AEDMNVK{I|L} 10 0 [QA] + + 34.882 18.337 9.21 3.1213 3.1213 46.199 0.0 0.0 0.0 0.0 1.4021671782240048 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.1595680409956017 + + [QA]AEDMNVK{I|L} 3.1213 + + 802 + 1 1.556 63958.9 1.0 5827 4660 10472 HBL1_DMSO_200M_050219_2,10489 HBL1_DMSO_200M_050219_2,10489,AQAEDMNVKL False True AQAEDMNVKL 56.849746 559.779650866985 2370497.5 10472.0 nc|ENSG00000156030|Q6PJG2|MIDEAS;;ENSG00000156030|ENST00000423556|MIDEAS 6.143919626871745 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10490 56.852 102.0 536060.0 25 0 40229.0 + 45093 VPYGEFKSV 9 111 513.2500691340886 1024.485585334977 2 513.2503539919853 MULTI CID FTMS 0 0 0 10472 191894.1875 0.701882399818306 -3 0.3265380859375 18 Unmodified _YPYPVSNSV_ ENST00000486905.1_1_17:19281885-19283261:+|nuORF;ENST00000572968.5_1_17:19282213-19283750:+|nuORF;ENSG00000166484|ENST00000395604|MAPK7;ENST00000490660.2_1_17:19282213-19285121:+|nuORF;nc|ENSG00000166484|Q13164-3|MAPK7 26.34127834903884 0.1960301806784604 4 PYW{M(Oxidation (M))|F}KSV 7 5 41.771 0.0 0.0 4.0772 0.0 0.0 99.03007782632876 0.0 99.03007782632876 0.0 14.323354237895884 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 PYW{M(Oxidation (M))|F}KSV 4.0772 - 516 + 1 1.556 48025.0 1.0 5828 4660 10472 HBL1_DMSO_200M_050219_2,10490 HBL1_DMSO_200M_050219_2,10490,YPYPVSNSV False True VPYGEFKSV 56.851943 513.250353991985 4974440.0 10472.0 ENST00000486905.1_1_17:19281885-19283261:+|nuORF;;ENST00000572968.5_1_17:19282213-19283750:+|nuORF;;ENSG00000166484|ENST00000395604|MAPK7;;ENST00000490660.2_1_17:19282213-19285121:+|nuORF;;nc|ENSG00000166484|Q13164-3|MAPK7 5.7606307665507 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10491 56.857 265.0 306690.0 25 0 19808.0 + 5677 DPHRRAYE 8 103 522.2524498118999 1042.4903466905996 2 522.2526122927666 MULTI CID FTMS 0 0 0 10472 203837.5625 0.8194136711820372 -1 0.1288261413574218 19 Unmodified _DPHRRAYE_ REV__CON__P02768-1;REV__ENSG00000163631|ENST00000295897|ALB;REV__nc|ENSG00000163631|P02768-2|ALB 21.74664581756881 0.5868176546531598 4 [Y{M(Oxidation (M))|F}]AQSV{M(Oxidation (M))|F}D 8 -1 70.214 0.0 0.0 6.7353 0.0 0.0 0.0 82.06688104801015 82.06688104801015 55.52634418136419 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3807196863200844 0.9247425010840048 [Y{M(Oxidation (M))|F}]AQSV{M(Oxidation (M))|F}D 6.7353 - 264 + 1 1.556 70615.7 1.0 5829 4660 10472 HBL1_DMSO_200M_050219_2,10491 HBL1_DMSO_200M_050219_2,10491,DPHRRAYE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10492 56.861 205.0 531240.0 25 0 51308.0 + 34840 SQFSGKITV 9 120 483.766865589022 965.519178244844 2 483.7674438357353 MULTI CID FTMS 0 0 0 10472 201711.859375 0.3982409119615049 -2 0.2264671325683593 20 Unmodified _SQFSGKITV_ ENSG00000075568|ENST00000186436|TMEM131 32.037481411007896 0.1235546156350648 4 [KG]S{M(Oxidation (M))|F}{I|L}TN{I|L}S 9 8 + 51.525 0.0 0.0 5.3366 5.3366 75.384 0.0 0.0 0.0 2.04119982655925 17.735345363363933 2.04119982655925 3.1776669307163417 0 0.3054621874040891 0.0 1.066901560044258 0.0 [KG]S{M(Oxidation (M))|F}{I|L}TN{I|L}S;[KG]S{I|L}{M(Oxidation (M))|F}TN{I|L}S;[KG]{I|L}S{M(Oxidation (M))|F}TN{I|L}S;[KG]S{M(Oxidation (M))|F}{I|L}TGG{I|L}S;[KG]S{I|L}{M(Oxidation (M))|F}TGG{I|L}S;[KG]S{I|L}T{M(Oxidation (M))|F}N{I|L}S;[KG]{I|L}S{M(Oxidation (M))|F}TGG{I|L}S;{[TV]|[{I|L}S]}[KG]{M(Oxidation (M))|F}TN{I|L}S;[KG]{I|L}ST{M(Oxidation (M))|F}N{I|L}S;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KG]{I|L}TN{I|L}S 5.3366;5.0074;4.5133;4.3829;4.0537;3.7378;3.5596;3.489;3.2437;3.2413 -;-;-;-;-;-;-;-;-;- 775 1 1.556 89217.7 1.0 5830 4660 10472 HBL1_DMSO_200M_050219_2,10492 HBL1_DMSO_200M_050219_2,10492,SQFSGKITV True True SQFSGKITV 56.860758 483.767443835735 3708815.0 10472.0 ENSG00000075568|ENST00000186436|TMEM131 3.8067432244618735 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10494 56.865 11.0 7383600.0 25 0 835830.0 + 44673 YPFKPPKV 8 73 488.2868778785377 974.5592028238756 2 488.2868835330009 MULTI CID FTMS 0 0 0 10493 5518993.5 0.1815010605936035 -14 1.4224014282226562 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 48.345845343767074 0.1470278396477103 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 70.091 0.0 0.0 7.1921 7.1921 94.609 0.0 0.0 0.0 24.62343876753387 11.29116356790732 11.29116356790732 33.65433863745331 0 1.1989700043360187 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[KP]PYV;[KP]PK{M(Oxidation (M))|F}PYV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[KP]PVY;[KP]PK{M(Oxidation (M))|F}PVY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[KP]PYV;[KP]{M(Oxidation (M))|F}[KP]PYV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[KP]PVY;[KP]{M(Oxidation (M))|F}[KP]PVY;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 7.1921;3.7388;3.5637;3.4705;3.2954;2.0767;2.0767;1.8085;1.8085;1.7862 +;-;-;-;-;-;-;-;-;- + 204 + 1 1.556 67914.5 1.0 5831 4661 10493 HBL1_DMSO_200M_050219_2,10494 HBL1_DMSO_200M_050219_2,10494,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10495 56.868 115.0 361800.0 25 0 43515.0 -1 RMWWYFGCYFC 11 64 846.3340789101264 1690.6536048870528 2 846.3342162966728 MULTI CID FTMS 0 0 0 10493 589036.5625 0.7575912985943872 1 -0.1268959045410156 2 2 Carbamidomethyl (C),Oxidation (M) _RM(Oxidation (M))WWYFGC(Carbamidomethyl (C))YFC(Carbamidomethyl (C))_ ENSG00000170075|ENST00000367282|GPR37L1 0.0 0.8751479354844584 4 [YN]YDQGY 7 -1 45.934 0.0 0.0 2.717 0.0 0.0 0.0 784.2870637095715 784.2870637095715 29.07476949145696 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 [YN]YDQGY 2.717 - 583 1 1.556 32880.6 1.0 5832 4661 10493 HBL1_DMSO_200M_050219_2,10495 HBL1_DMSO_200M_050219_2,10495,RMWWYFGCYFC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10496 56.869 40.0 1902000.0 25 0 204970.0 + 36570 TALKIMKV 8 91 452.2882646365251 902.5619763398504 2 452.2883788943291 MULTI CID FTMS 0 0 0 10493 1462017.0 0.2915859388205167 -2 0.1980781555175781 3 Unmodified _TALKIMKV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 67.83816525789305 0.1151378002238335 4 TA{I|L}K{I|L}MKV 8 0 + 93.371 0.0 0.0 10.345 10.345 85.286 0.0 0.0 0.0 31.8943306386236 2.730012720637376 2.730012720637376 2.730012720637376 0 1.8481362441963327 1.6989700043360187 0.0 0.3054621874040891 + + TA{I|L}K{I|L}MKV;TA{I|L}K{I|L}MVK;V[VS]K{I|L}MKV;V[VS]K{I|L}MVK 10.345;10.043;6.6305;6.328 +;-;-;- + 323 + 1 1.556 61838.3 1.0 5833 4661 10493 HBL1_DMSO_200M_050219_2,10496 HBL1_DMSO_200M_050219_2,10496,TALKIMKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10497 56.87 56.0 1112400.0 25 0 204170.0 + 33736 SLAEGLRTV 9 102 473.2710007253411 944.5274485174822 2 473.2719909548759 MULTI CID FTMS 0 0 0 10493 697316.5 0.5491240495463858 -3 0.2957191467285156 4 Unmodified _SLAEGLRTV_ ENSG00000111331|ENST00000228928|OAS3 28.49450938151212 0.1686335738423394 4 {[TV]|[{I|L}S]}AEG{I|L}RTV 9 0 + 70.613 0.0 0.0 7.476 7.476 90.71 0.0 0.0 0.0 55.23387189888816 11.71249901363808 11.71249901363808 9.208187539523747 0 0.9247425010840048 2.0 0.805462187404089 0.0 + + {[TV]|[{I|L}S]}AEG{I|L}RTV;{[TV]|[{I|L}S]}AEG{I|L}[VG]TV;{[TV]|[{I|L}S]}AEG{I|L}{[VA]|[{I|L}G]}SV;{[TV]|[{I|L}S]}AW{I|L}[VG]TV;{[TV]|[{I|L}S]}AW{I|L}{[VA]|[{I|L}G]}SV;{[TV]|[{I|L}S]}V[RD]RTV;{[TV]|[{I|L}S]}V[RD][VG]TV;{[TV]|[{I|L}S]}V[RD]{[VA]|[{I|L}G]}SV 7.476;6.5011;6.379;5.8095;5.6875;3.6861;2.7055;2.5834 +;-;-;-;-;-;-;- + 168 + 1 1.556 53840.8 1.0 5834 4661 10493 HBL1_DMSO_200M_050219_2,10497 HBL1_DMSO_200M_050219_2,10497,SLAEGLRTV False True SLAEGLRTV 56.870293 473.271990954876 8578760.0 10493.0 ENSG00000111331|ENST00000228928|OAS3 5.774870236714681 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10498 56.872 67.0 791170.0 25 0 59108.0 + 34928 SQIREMETL 9 74 553.7790238778095 1105.543494822419 2 553.7790405154228 MULTI CID FTMS 0 0 0 10493 627445.25 0.6170808753207764 -3 0.2957191467285156 5 Unmodified _SQIREMETL_ ENSG00000157456|ENST00000288207|CCNB2 42.312485326615175 0.0627620958981271 4 [{I|L}T]NREMET{I|L} 9 3 + 57.858 0.0 0.0 5.2335 5.2335 72.522 0.0 0.0 0.0 1.9504625720438893 16.478174818886373 1.9504625720438893 1.9504625720438893 0 1.1549471895720984 1.0969100130080565 0.4247425010840047 0.0 [{I|L}T]NREMET{I|L};{[QS]|[NT]}{I|L}REMET{I|L};[{I|L}T]NREMTE{I|L};{[QS]|[NT]}{I|L}REMTE{I|L};[KG][W{I|L}]EMET{I|L};[{I|L}T]NRTMEE{I|L};{[QS]|[NT]}{I|L}RTMEE{I|L};[KG][W{I|L}]EMTE{I|L};[KG][W{I|L}]TMEE{I|L} 5.2335;5.0571;4.3496;4.1732;3.7926;3.5581;3.3817;2.9087;2.1172 -;+;-;-;-;-;-;-;- + 264 1 1.556 46764.7 1.0 5835 4661 10493 HBL1_DMSO_200M_050219_2,10498 HBL1_DMSO_200M_050219_2,10498,SQIREMETL True True SQIREMETL 56.871904 553.779040515423 7159776.0 10493.0 ENSG00000157456|ENST00000288207|CCNB2 4.893556276957194 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10499 56.875 144.0 745120.0 25 0 85911.0 + 44816 YPNKYESVI 9 120 556.7846092152754 1111.5546654973507 2 556.7849609255791 MULTI CID FTMS 0 0 0 10493 448184.71875 0.2385668513977123 -6 0.6310081481933594 6 Unmodified _YPNKYESVI_ ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1 45.69961567697781 0.0497987121815769 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[KG]ESYV{I|L} 10 3 + 64.204 0.0 0.0 5.7761 5.7761 76.781 0.0 0.0 0.0 11.034087492996392 12.306634937682162 11.034087492996392 3.0102999566398125 0 1.055462187404089 2.0 0.6694451763165201 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[KG]ESYV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[KG]EYSV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[KG]ESVY{I|L};[VS]M[KG]ESYV{I|L};[NP]KYESYV{I|L};{[QN]|[E{I|L}]|[KN]}PYESYV{I|L};[VS]M[KG]EYSV{I|L};[NP]KYEYSV{I|L};{[QN]|[E{I|L}]|[KN]}PYEYSV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[WK]WY{I|L} 5.7761;5.5053;5.1409;4.7834;4.7122;4.6543;4.5126;4.4413;4.3835;4.2413 -;-;-;-;-;-;-;-;-;- 729 1 1.556 90976.2 1.0 5836 4661 10493 HBL1_DMSO_200M_050219_2,10499 HBL1_DMSO_200M_050219_2,10499,YPNKYESVI True True YPNKYESVI 56.874797 556.784960925579 39163184.0 10493.0 nc|ENSG00000100280|Q10567-2|AP1B1;;nc|ENSG00000100280|Q10567-3|AP1B1;;nc|ENSG00000100280|Q10567-4|AP1B1;;ENSG00000100280|ENST00000357586|AP1B1 5.188087781270345 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10500 56.877 121.0 504620.0 25 0 36006.0 + 2196 AQAPGVITGV 10 87 456.7612529728513 0 456.7613098025322 PEAK CID FTMS 0 0 0 10493 438824.59375 1.0 0 0.0 7 Unmodified _AQAPGVITGV_ ENSG00000179950|ENST00000526683|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60 30.63653989081413 0.2106260509139429 4 {I|L}TT 3 8 18.447 0.0 0.0 2.0238 0.0 0.0 523.2766430533214 70.03055750064686 593.3072005539683 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4634679910804404 0.0 {I|L}TT 2.0238 - 113 + 1 1.556 54222.6 1.0 5837 4661 10493 HBL1_DMSO_200M_050219_2,10500 HBL1_DMSO_200M_050219_2,10500,AQAPGVITGV False True AQAPGVITGV 56.877302 456.761309802532 11806848.0 10493.0 ENSG00000179950|ENST00000526683|PUF60;;nc|ENSG00000179950|Q9UHX1-4|PUF60;;nc|ENSG00000179950|Q9UHX1-3|PUF60;;nc|ENSG00000179950|Q9UHX1-5|PUF60;;nc|ENSG00000179950|Q9UHX1-6|PUF60;;nc|ENSG00000179950|Q9UHX1-2|PUF60 6.338794390360515 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10501 56.88 123.0 747850.0 25 0 143440.0 + 10172 FPYYGKKLHV 10 94 417.90060327424754 1250.679980422943 3 417.9008056521416 MULTI CID FTMS 0 0 0 10493 416704.1875 0.7613315906499847 -2 0.1980781555175781 8 Unmodified _FPYYGKKLHV_ ENSG00000069849|ENST00000286371|ATP1B3 37.07464296494664 0.1884581770199685 4 {M(Oxidation (M))|F}PYYGKK{I|L}HV 10 0 + 49.282 0.0 0.0 3.9405 3.9405 78.753 0.0 0.0 0.0 15.026975159433526 10.0 10.0 10.0 0 0.0 0.0 0.0 0.0 + + {M(Oxidation (M))|F}PYYGKK{I|L}HV;{M(Oxidation (M))|F}PYYGKK{I|L}VH;{M(Oxidation (M))|F}PY{I|L}{I|L}{[TV]|[{I|L}S]}YHV;{M(Oxidation (M))|F}PY{I|L}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}QVV;{M(Oxidation (M))|F}PYYGKK[HV]{I|L};{M(Oxidation (M))|F}[{I|L}T]YCKK{I|L}HV;{M(Oxidation (M))|F}PY{I|L}{I|L}{[TV]|[{I|L}S]}YVH;{M(Oxidation (M))|F}[{I|L}T]YY[VP]{I|L}HV;{M(Oxidation (M))|F}[{I|L}T]YCKK{I|L}VH;{M(Oxidation (M))|F}[{I|L}T]YY[VP]{I|L}VH 3.9405;3.1409;2.9129;2.6722;2.582;2.3413;2.1134;1.8049;1.5418;1.0053 +;-;-;-;-;-;-;-;-;- + 297 + 1 1.556 78267.7 1.0 5838 4661 10493 HBL1_DMSO_200M_050219_2,10501 HBL1_DMSO_200M_050219_2,10501,FPYYGKKLHV False True FPYYGKKLHV 56.879839 417.900805652142 5599186.0 10493.0 ENSG00000069849|ENST00000286371|ATP1B3 6.337942441304524 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10502 56.883 135.0 708810.0 25 0 101290.0 + 39381 VAIEHLDKI 9 122 346.53830590295547 1036.5930883090664 3 346.5378906130791 MULTI CID FTMS 0 0 0 10493 403172.09375 0.1425663178612652 -2 0.1980781555175781 9 Unmodified _VAIEHLDKI_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 34.93206674587334 0.1032771302489716 4 VA{I|L}E{I|L}HDK{I|L} 9 2 + 64.935 0.0 0.0 6.2643 6.2643 77.946 0.0 0.0 0.0 27.234267148248577 12.598138863595146 12.598138863595146 2.742275032520148 0 0.1050541008457974 1.5228787452803376 0.8252574989159953 0.3807196863200844 VA{I|L}E{I|L}HDK{I|L};VA{I|L}{I|L}EHDK{I|L};VA{I|L}EH{I|L}DK{I|L};VA{I|L}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}SK{I|L};VA{I|L}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QS]|[NT]}{I|L};V{I|L}AE{I|L}HDK{I|L};V{I|L}A{I|L}EHDK{I|L};V{I|L}AEH{I|L}DK{I|L};V{I|L}A{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}SK{I|L};V{I|L}A{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QS]|[NT]}{I|L} 6.2643;5.9997;5.9505;5.8464;5.369;4.9145;4.65;4.6007;4.4967;4.0193 -;-;+;-;-;-;-;-;-;- + 923 + 1 1.556 79772.6 1.0 5839 4661 10493 HBL1_DMSO_200M_050219_2,10502 HBL1_DMSO_200M_050219_2,10502,VAIEHLDKI True True VAIEHLDKI 56.882566 346.537890613079 25432531.0 10493.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 4.105384508768718 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10503 56.887 234.0 313500.0 25 0 13922.0 + 7633 EIYRSFQNV 9 123 578.2934150053655 1154.572277077531 2 578.2928954958916 MULTI CID FTMS 0 0 0 10493 243522.84375 0.7408467848773055 -2 0.1980781555175781 10 Unmodified _EIYRSFQNV_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 82.5293158979368 0.0169039238599547 4 {[QN]|[E{I|L}]|[KN]}V[HV]{[MS]|[{M(Oxidation (M))|F}A]}QNV 10 4 + 44.307 0.0 0.0 3.8375 3.8375 78.999 0.0 0.0 0.0 8.858115941263627 12.467482855444548 8.858115941263627 11.870866433571445 0 0.6203715150305281 2.0 1.1861818737241734 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}V[HV]{[MS]|[{M(Oxidation (M))|F}A]}QNV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}ENV;[AG]NV[HV]{[MS]|[{M(Oxidation (M))|F}A]}QNV;{[QN]|[E{I|L}]|[KN]}Y[TA][HV]V[HS];{[QN]|[E{I|L}]|[KN]}V[HV]{[CP]|[EA]}Q[KC];{[QN]|[E{I|L}]|[KN]}{[WN]|[YH]}[RD]V[HS];[KC]E[RK][KC]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 3.8375;2.8094;2.3615;1.0842;0.95491;0.49513;0.42927 -;-;-;-;-;-;- 234 1 1.556 61370.9 1.0 5840 4661 10493 HBL1_DMSO_200M_050219_2,10503 HBL1_DMSO_200M_050219_2,10503,EIYRSFQNV True True EIYRSFQNV 56.886962 578.292895495892 2311460.0 10493.0 chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;;nc|ENSG00000079263|Q13342-5|SP140;;nc|ENSG00000079263|Q13342-2|SP140;;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-6|SP140;;ENSG00000079263|ENST00000392045|SP140;;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-3|SP140 7.574819723765056 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10504 56.901 800.0 205290.0 25 0 19499.0 44517 YPDIFMREEV 10 195 649.809638008892 1297.6047230845838 2 649.8093139529228 MULTI CID FTMS 0 0 0 10493 209779.359375 1.0 0 0.0 11 Unmodified _YPDIFMREEV_ ENSG00000115507|ENST00000282549|OTX1;ENSG00000165588|ENST00000672264|OTX2;nc|ENSG00000165588|P32243|OTX2 36.506200033944 0.1944608063770638 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQCKVYEV 11 7 + 76.301 0.0 0.0 5.8801 5.8801 74.247 0.0 0.0 0.0 14.39687635420036 14.39687635420036 14.39687635420036 1.4934390708945529 0 0.9436726795685344 1.5228787452803376 0.9476212463643424 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQCKVYEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{M(Oxidation (M))|F}WPVYEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQCKYVEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA{[{M(Oxidation (M))|F}D]|MM}PVYEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQCYKVEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{M(Oxidation (M))|F}WPYVEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQCKYEVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQCKVEYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA{[{M(Oxidation (M))|F}D]|MM}VPYEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAQCYKEVV 5.8801;5.765;5.6787;5.6392;5.5824;5.5636;5.5386;5.5124;5.4683;5.4423 -;-;-;-;-;-;-;-;-;- 19273 1 1.556 121481.1 0.9700000286102296 5841 4661 10493 HBL1_DMSO_200M_050219_2,10504 HBL1_DMSO_200M_050219_2,10504,YPDIFMREEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10505 56.908 406.0 340680.0 25 0 18085.0 -1 IHLAMMSNSL 10 135 574.7752831982402 1147.5360134632804 2 574.7755615115166 MULTI CID FTMS 0 0 0 10493 206316.109375 0.2707447680165557 -2 0.1980781555175781 12 2 Oxidation (M) _IHLAM(Oxidation (M))M(Oxidation (M))SNSL_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 14.838274106304384 0.5985701837916485 4 [H{I|L}]{I|L}GSS{I|L}H 8 -1 64.646 0.0 0.0 5.6335 0.0 0.0 0.0 300.04959923892415 300.04959923892415 25.95146254664001 0.0 0.0 0.0 0 0.5 1.5228787452803376 1.2302046884880935 0.0 [H{I|L}]{I|L}GSS{I|L}H 5.6335 - 532 1 1.556 111501.0 1.0 5842 4661 10493 HBL1_DMSO_200M_050219_2,10505 HBL1_DMSO_200M_050219_2,10505,IHLAMMSNSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10506 56.922 800.0 163720.0 25 0 7055.3 + 8335 ERQQQQWNVI 10 147 664.8387263338075 1327.6628997344149 2 664.8387328982353 MULTI CID FTMS 0 0 0 10493 201113.515625 1.0 0 0.0 13 Unmodified _ERQQQQWNVI_ REV__ENSG00000179271|ENST00000316939|GADD45GIP1 29.84058131909904 0.2982332456971691 4 {[SA]|[TG]}GGVAAPSQSANV{I|L} 15 -1 + 109.27 0.0 0.0 8.2303 8.2303 79.234 0.0 0.0 0.0 5.454759249335524 16.690067809585756 5.454759249335524 0.4542290286760817 0 0.555462187404089 0.8860566476931632 2.705399664616561 1.066901560044258 {[SA]|[TG]}GGVAAPSQSANV{I|L};{[SA]|[TG]}NVAAPSQSANV{I|L};[VG]GASAAPSQSANV{I|L};[AG]SGVAAPSQSANV{I|L};[AG]GSVAAPSQSANV{I|L};{[SA]|[TG]}GGVAAPSQSAGGV{I|L};[VG]G[KG]DPSQSANV{I|L};[VG]QSAAPSQSANV{I|L};{[SA]|[TG]}NVAAPS[AG]SANV{I|L};{[SA]|[TG]}NVAAPSQSAGGV{I|L} 8.2303;8.1961;7.8194;7.7018;7.645;7.5501;7.5423;7.5423;7.5144;7.5144 -;-;-;-;-;-;-;-;-;- 6175 1 1.556 98210.5 0.9399999976158142 5843 4661 10493 HBL1_DMSO_200M_050219_2,10506 HBL1_DMSO_200M_050219_2,10506,ERQQQQWNVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10507 56.936 800.0 180970.0 25 0 12073.0 -1 0 127 981.9142630086524 1961.8139730841044 2 982.4172241091728 MULTI CID FTMS 0 0 0 10493 198005.234375 0.5614554123943145 -4 0.3957901000976562 14 4 [YQ]{I|L}EN[C(Carbamidomethyl (C))M]GYNEN 12 -1 65.505 0.0 0.0 3.339 0.0 0.0 0.0 443.1843604360124 443.1843604360124 14.002808361964924 0.0 0.0 0.0 0 0.0 1.0 0.7302046884880937 2.261922997584469 [YQ]{I|L}EN[C(Carbamidomethyl (C))M]GYNEN 3.339 - 5063 1 1.556 97730.5 0.8100000023841858 5844 4661 10493 HBL1_DMSO_200M_050219_2,10507 HBL1_DMSO_200M_050219_2,10507, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10508 56.944 393.0 240990.0 25 0 22394.0 28794 PYMLNEEETT 10 117 409.51225300012527 1225.514929600576 3 409.5122863650322 MULTI CID FTMS 0 0 0 10493 181213.09375 1.0 0 0.0 15 Unmodified _PYMLNEEETT_ ENSG00000172139|ENST00000305815|SLC9C1;nc|ENSG00000172139|Q4G0N8-2|SLC9C1 6.723162845929126 0.6955379296933136 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y 3 8 31.325 0.0 0.0 2.556 0.0 0.0 0.0 799.3032320611936 799.3032320611936 18.560333777879485 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y 2.556 - 105 + 1 1.556 76821.6 1.0 5845 4661 10493 HBL1_DMSO_200M_050219_2,10508 HBL1_DMSO_200M_050219_2,10508,PYMLNEEETT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10509 56.95 334.0 333270.0 25 0 18551.0 + -1 LPYPASSRL 9 157 502.28433851949086 0 502.2856628298759 PEAK CID FTMS 0 0 0 10493 179823.96875 0.5573806870707552 -3 0.2957191467285156 16 Oxidation (M) _LM(Oxidation (M))LLAAWIG_ nc|ENSG00000104221|Q9HAW0-2|BRF2;ENSG00000104221|ENST00000220659|BRF2 28.17323086031832 0.1269780855172776 4 PYK 3 -1 26.242 0.0 0.0 2.6175 0.0 0.0 113.08675235574216 498.2185152643188 611.3052676200609 0.0 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.0 PYK 2.6175 - 396 + 1 1.556 89853.7 1.0 5846 4661 10493 HBL1_DMSO_200M_050219_2,10509 HBL1_DMSO_200M_050219_2,10509,LMLLAAWIG False False LPYPASSRL 56.950022 502.285662829876 2544884.75 10493.0 nc|ENSG00000104221|Q9HAW0-2|BRF2;;ENSG00000104221|ENST00000220659|BRF2 3.5979607899983725 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10510 56.956 321.0 689900.0 25 0 130790.0 42710 VVAGIPRT 8 122 406.754850323561 811.495147713922 2 406.7546874880791 MULTI CID FTMS 0 0 0 10493 175140.34375 0.1826637260513602 -12 1.1905059814453125 17 Unmodified _VVAGIPRT_ ENSG00000164733|ENST00000353047|CTSB 15.847184025352805 0.6768015514314958 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV 7 7 + 65.025 0.0 0.0 8.013 8.013 94.409 0.0 0.0 0.0 13.697875200541304 13.697875200541304 13.697875200541304 13.697875200541304 0 1.6643943297944483 2.0 0.0 0.2887254899964357 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV;P{M(Oxidation (M))|F}KPPKV;P{M(Oxidation (M))|F}KPPVK;[KP]P{M(Oxidation (M))|F}KPV;[KP]{M(Oxidation (M))|F}PKPV;[KP]PK{M(Oxidation (M))|F}PV;{[HG]|PP}K{M(Oxidation (M))|F}KPV;P{M(Oxidation (M))|F}KPVPK;{[HG]|PP}KK{M(Oxidation (M))|F}PV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}V]KPV 8.013;6.325;5.1544;4.7847;4.7153;4.4783;4.4138;4.3499;4.1074;3.6239 -;-;-;-;-;-;-;-;-;- 380 1 1.556 172433.6 1.0 5847 4661 10493 HBL1_DMSO_200M_050219_2,10510 HBL1_DMSO_200M_050219_2,10510,VVAGIPRT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10511 56.97 800.0 141680.0 25 0 7070.8 + 23746 RVLPESNSDVDQL 13 131 736.3736657950092 1470.7327786568185 2 736.3726684451103 MULTI CID FTMS 0 0 0 10493 167788.9375 1.0 0 0.0 18 Unmodified _LTWSFLWSVFW_ ENSG00000128513|ENST00000357628|POT1;nc|ENSG00000128513|Q9NUX5-2|POT1 5.731851221503515 0.8481046878870278 4 [HV]VDVSV{M(Oxidation (M))|F}DVDQ{I|L} 13 12 + 89.728 0.0 0.0 6.1009 6.1009 84.39 0.0 0.0 0.0 22.74227503252014 8.25177490489429 8.25177490489429 8.39529417337181 0 0.3792816040978115 1.6989700043360187 1.325257498915995 0.0 [HV]VDVSV{M(Oxidation (M))|F}DVDQ{I|L};[HV]VDSVV{M(Oxidation (M))|F}DVDQ{I|L};[HV]VSVDV{M(Oxidation (M))|F}DVDQ{I|L};[HV]SVVDV{M(Oxidation (M))|F}DVDQ{I|L};[HV]VSDVV{M(Oxidation (M))|F}DVDQ{I|L};[HV]SVDVV{M(Oxidation (M))|F}DVDQ{I|L};[HV]VDV[{M(Oxidation (M))|F}V]SDVDQ{I|L};{[QN]|[E{I|L}]|[KN]}[HA]VSV{M(Oxidation (M))|F}DVDQ{I|L};[HV]VSVHHSDVDQ{I|L};[DV][HV]VSV{M(Oxidation (M))|F}DVDQ{I|L} 6.1009;5.5301;5.3836;5.3152;5.2222;5.1537;4.8799;4.5546;4.1626;4.1179 -;-;-;-;-;-;-;-;-;- 1891 1 1.556 81394.4 0.8299999833106995 5848 4661 10493 HBL1_DMSO_200M_050219_2,10511 HBL1_DMSO_200M_050219_2,10511,LTWSFLWSVFW False False RVLPESNSDVDQL 56.969699 736.37266844511 1290808.375 10493.0 ENSG00000128513|ENST00000357628|POT1;;nc|ENSG00000128513|Q9NUX5-2|POT1 7.2620423634847 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10512 56.985 800.0 239260.0 25 0 16791.0 + 45065 YPYGPVENKI 10 179 590.3062888847411 1178.598024836282 2 590.3057739138603 MULTI CID FTMS 0 0 0 10493 148629.015625 0.5294542138006594 -2 0.1980781555175781 19 Unmodified _YPYGPVENKI_ ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF 117.7605887643192 0.0007874417321281 4 YPYG[VP]ENK{I|L} 10 0 + 110.6 0.0 0.0 9.3843 9.3843 90.788 0.0 0.0 0.0 23.76287494579977 6.883035587213897 6.883035587213897 6.883035587213897 0 2.853917193908117 2.0 0.6139829889124311 1.6952349168877847 + + YPYG[VP]ENK{I|L};YPYG[VP]EN{I|L}K;YPYG[VP]EGGK{I|L};YPY[RP]ENK{I|L};YPYG[VP]EGG{I|L}K;YPY[RP]EN{I|L}K;YPYG[VP]E[KQ]V;{I|L}{M(Oxidation (M))|F}YG[VP]ENK{I|L};YPY[RP]EGGK{I|L};Y{I|L}{M(Oxidation (M))|F}G[VP]ENK{I|L} 9.3843;8.8003;8.6067;8.1466;8.0227;7.5626;7.4844;7.3681;7.3654;6.8377 +;-;-;-;-;-;-;-;-;- + 8625 + 1 1.556 145315.5 0.8399999737739563 5849 4661 10493 HBL1_DMSO_200M_050219_2,10512 HBL1_DMSO_200M_050219_2,10512,YPYGPVENKI True True YPYGPVENKI 56.984705 590.30577391386 2037590.0 10493.0 nc|ENSG00000171634|Q12830|BPTF;;ENSG00000171634|ENST00000306378|BPTF;;nc|ENSG00000171634|Q12830-4|BPTF 7.045432249704997 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10513 56.988 153.0 402840.0 25 0 26518.0 + 26467 NTIESLKDV 9 104 509.77495834362696 1017.535363754054 2 509.7746154665947 MULTI CID FTMS 0 0 0 10493 151160.703125 0.2526960415811441 -3 0.2957191467285156 20 Unmodified _NTIESLKDV_ ENSG00000180104|ENST00000512944|EXOC3 45.739877483867886 0.0497104363764649 4 {[QS]|[NT]}{I|L}ES{I|L}KDV 9 0 + 54.866 0.0 0.0 5.3921 5.3921 77.588 0.0 0.0 0.0 31.82335423789588 8.402887499330731 8.402887499330731 4.50948913022954 0 0.805462187404089 1.6989700043360187 0.5242275032520141 0.0 + + {[QS]|[NT]}{I|L}ES{I|L}KDV;{[QS]|[NT]}{I|L}ES{I|L}DKV;{[QS]|[NT]}{I|L}ESVEKV;{[QS]|[NT]}{I|L}ES{I|L}[TA]AV;{[QS]|[NT]}{I|L}ESV[VS]AV;[H{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}KDV;[H{I|L}]{[NV]|[RG]}PENPV;[H{I|L}]{[NV]|[RG]}PQPDV;[H{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}DKV;[H{I|L}]{[NV]|[RG]}PQDPV 5.3921;4.9489;4.0111;3.9149;2.9771;2.5704;2.3089;2.1528;2.1272;1.8954 +;-;-;-;-;-;-;-;-;- + 483 + 1 1.556 54971.4 1.0 5850 4661 10493 HBL1_DMSO_200M_050219_2,10513 HBL1_DMSO_200M_050219_2,10513,NTIESLKDV True True NTIESLKDV 56.987738 509.774615466595 3019412.75 10493.0 ENSG00000180104|ENST00000512944|EXOC3 6.36898946762085 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10515 56.992 3.3 26455000.0 25 0 5400200.0 + 44663 YPFKPPKV 8 74 325.86056900573425 974.5598776174028 3 325.8603088259697 MULTI CID FTMS 0 0 0 10514 16689879.0 0.2586490129454382 -13 1.317401885986328 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 51.807 0.0 0.0 5.316 5.316 78.852 0.0 0.0 0.0 27.37888070366388 5.963076624388712 5.963076624388712 5.963076624388712 0 0.2302046884880938 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;YP{M(Oxidation (M))|F}KPV[KP];YP{M(Oxidation (M))|F}KVP[KP];[KP]PKVY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[RV][{I|L}A]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T][KP]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[RV]RR{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 5.316;4.7041;4.5234;1.9079;1.7691;0.73845;0.72987;0.080736 +;-;-;-;-;-;-;- + 183 + 1 1.56 76416.6 1.0 5851 4662 10514 HBL1_DMSO_200M_050219_2,10515 HBL1_DMSO_200M_050219_2,10515,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10516 56.994 72.0 910110.0 25 0 82940.0 + 32393 RYSEYAEEF 9 63 597.2591544266127 1192.5037559200252 2 597.2593261599541 MULTI CID FTMS 0 0 0 10514 891394.25 0.7822011241252118 1 -0.0468826293945312 2 Unmodified _RYSEYAEEF_ ENSG00000139505|ENST00000381801|MTMR6 19.361941925380144 0.3125782356748823 4 YAEE{M(Oxidation (M))|F} 5 4 46.454 0.0 0.0 3.8955 0.0 0.0 535.2397070844871 0.0 535.2397070844871 0.0 35.48455006504028 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + YAEE{M(Oxidation (M))|F} 3.8955 + + 47 1 1.56 54938.6 1.0 5852 4662 10514 HBL1_DMSO_200M_050219_2,10516 HBL1_DMSO_200M_050219_2,10516,RYSEYAEEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10517 56.995 24.0 2572800.0 25 0 681090.0 + 34366 SLTGRLDEV 9 76 495.266998553184 988.519444173168 2 495.2669860720634 MULTI CID FTMS 0 0 0 10514 2434223.0 0.4946133434007932 -2 0.1961479187011718 3 Unmodified _SLTGRLDEV_ ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6 31.26834338654808 0.1333407332142048 4 {[TV]|[{I|L}S]}VWGEVTV 9 6 + 58.879 0.0 0.0 5.9563 5.9563 74.149 0.0 0.0 0.0 20.285371682087217 14.973024840566469 14.973024840566469 1.249387366082999 0 0.7742275032520141 2.0 0.3054621874040891 0.0 {[TV]|[{I|L}S]}VWGEVTV;{[TV]|[{I|L}S]}VWGTVEV;{[TV]|[{I|L}S]}[WK]EVEV;{NN|[MP]|[D{I|L}]|[EV]}[WK]EVTV;{NN|[MP]|[D{I|L}]|[EV]}[WK]TVEV;[WK]{NN|[MP]|[D{I|L}]|[EV]}EVTV;[WK]{NN|[MP]|[D{I|L}]|[EV]}TVEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[K{I|L}]WVTV;[WK]{[TV]|[{I|L}S]}EVEV 5.9563;5.8299;4.1901;3.9042;3.7778;2.1855;2.0591;2.0074;1.352 -;-;-;-;-;-;-;-;- 171 1 1.56 51362.1 1.0 5853 4662 10514 HBL1_DMSO_200M_050219_2,10517 HBL1_DMSO_200M_050219_2,10517,SLTGRLDEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10518 56.996 31.0 1947500.0 25 0 199840.0 + 45050 YPYEYEGGHI 10 81 614.269633838741 1226.524714744282 2 614.2697021365166 MULTI CID FTMS 0 0 0 10514 1677762.125 0.2713148166250945 -4 0.4226150512695312 4 Unmodified _YPYEYEGGHI_ ENSG00000101224|ENST00000245960|CDC25B;ENSG00000164045|ENST00000302506|CDC25A;nc|ENSG00000101224|P30305-2|CDC25B;nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B;nc|ENSG00000164045|P30304-2|CDC25A 88.90359156742426 0.0097709727222801 4 YPYEYEGGH{I|L} 10 0 + 98.211 0.0 0.0 8.0073 8.0073 84.885 0.0 0.0 0.0 46.63425655227236 7.9390028798052015 7.9390028798052015 3.521825181113627 0 1.4361818737241734 2.0 1.048455006504028 0.0 + + YPYEYEGGH{I|L};YPYEYENH{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{[RE]|[WV]}EEY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{[RE]|[WV]}EYE{I|L};[HN]{I|L}{M(Oxidation (M))|F}YEYE{I|L};{[HG]|PP}G{I|L}{M(Oxidation (M))|F}YEYE{I|L};[HN]{I|L}{M(Oxidation (M))|F}YEEY{I|L};{[HG]|PP}G{I|L}{M(Oxidation (M))|F}YEEY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{[RE]|[WV]}HH{M(Oxidation (M))|F}{I|L};[YE][HN]E{I|L}{M(Oxidation (M))|F}Y{I|L} 8.0073;7.7201;5.2243;5.062;4.0003;3.963;3.4086;3.3713;2.7991;2.6908 +;-;-;-;-;-;-;-;-;- + 578 + 1 1.56 50804.1 1.0 5854 4662 10514 HBL1_DMSO_200M_050219_2,10518 HBL1_DMSO_200M_050219_2,10518,YPYEYEGGHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10519 56.997 35.0 2386900.0 25 0 193730.0 + 39382 VAIEHLDKI 9 112 519.3028507558765 1036.591148578553 2 519.3036376833916 MULTI CID FTMS 0 0 0 10514 1322495.25 0.5391710719513639 -2 0.1961479187011718 5 Unmodified _VAIEHLDKI_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 67.83816525789305 0.0219346420158844 4 VA{I|L}EH{I|L}DK{I|L} 9 0 + 94.203 0.0 0.0 9.0877 9.0877 87.883 0.0 0.0 0.0 4.771212547196626 4.522976709946306 4.522976709946306 4.522976709946306 0 1.91944517631652 1.6989700043360187 0.4247425010840047 0.5 + + VA{I|L}EH{I|L}DK{I|L};VA{I|L}EH{I|L}D{I|L}K;{I|L}G{I|L}EH{I|L}DK{I|L};{I|L}G{I|L}EH{I|L}D{I|L}K;VA{I|L}EH{I|L}[VG]S{I|L};V{I|L}AEH{I|L}DK{I|L};{I|L}G{I|L}EH{I|L}[VG]S{I|L};V{I|L}AEH{I|L}D{I|L}K;{I|L}VAEH{I|L}DK{I|L};{I|L}VAEH{I|L}D{I|L}K 9.0877;8.6514;8.6274;8.1911;6.7579;6.7018;6.2976;6.2655;6.2415;5.8052 +;-;-;-;-;-;-;-;-;- + 1158 + 1 1.56 71509.2 1.0 5855 4662 10514 HBL1_DMSO_200M_050219_2,10519 HBL1_DMSO_200M_050219_2,10519,VAIEHLDKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10520 56.999 62.0 1414200.0 25 0 98859.0 + 8873 FADNRIKTL 9 96 539.304740198545 1076.59492746389 2 539.3066894412041 MULTI CID FTMS 0 0 0 10514 930626.125 0.1245523065185562 -5 0.5226860046386719 6 Unmodified _FADNRIKTL_ ENSG00000196632|ENST00000354646|WNK3;nc|ENSG00000196632|Q9BYP7-2|WNK3;nc|ENSG00000196632|Q9BYP7-3|WNK3;nc|ENSG00000196632|Q9BYP7-4|WNK3 34.93206674587334 0.1032771302489716 4 [R{M(Oxidation (M))|F}]WN{I|L}KT{I|L} 8 3 + 59.914 0.0 0.0 5.5652 5.5652 84.681 0.0 0.0 0.0 5.484550065040281 46.419497169889326 5.484550065040281 9.262137858390815 0 1.0 0.0 0.3494850021680094 0.3054621874040891 [R{M(Oxidation (M))|F}]WN{I|L}KT{I|L};[R{M(Oxidation (M))|F}]WGG{I|L}KT{I|L};[QP][YT]N{I|L}KT{I|L};[QP][YT]GG{I|L}KT{I|L};[R{M(Oxidation (M))|F}]W[KA]RT{I|L};[K{I|L}][RN]{M(Oxidation (M))|F}ADT{I|L};[K{I|L}][RN]{M(Oxidation (M))|F}WT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RK]{M(Oxidation (M))|F}ADT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RK]{M(Oxidation (M))|F}WT{I|L};[R{M(Oxidation (M))|F}]W[KA][VG]T{I|L} 5.5652;4.7049;4.0981;3.2428;3.0754;2.6322;2.5897;2.2626;2.22;2.215 -;-;-;-;-;-;-;-;-;- 317 1 1.56 74738.3 1.0 5856 4662 10514 HBL1_DMSO_200M_050219_2,10520 HBL1_DMSO_200M_050219_2,10520,FADNRIKTL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10521 57.001 72.0 994770.0 25 0 160090.0 11394 GGLGPMNI 8 94 379.6950466815707 0 379.6951782107353 PEAK CID FTMS 0 0 0 10514 851301.25 0.5600975646022543 2 -0.0648765563964843 7 Unmodified _GGLGPMNI_ ENSG00000117450|ENST00000319248|PRDX1 5.760428011301431 0.5786759180849727 4 {I|L}H 2 7 10.459 0.0 0.0 1.3809 0.0 0.0 262.093408132803 242.1146029108032 504.2080110436061 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 {I|L}H 1.3809 - 23 + 1 1.56 64077.1 1.0 5857 4662 10514 HBL1_DMSO_200M_050219_2,10521 HBL1_DMSO_200M_050219_2,10521,GGLGPMNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10522 57.002 70.0 988160.0 25 0 219810.0 13009 HAQKMVEFL 9 101 368.19447723393614 1101.5616023020084 3 368.1940795779228 MULTI CID FTMS 0 0 0 10514 605389.0 0.0627739215344904 41 -3.77895736694336 8 Unmodified _HAQKMVEFL_ ENSG00000169251|ENST00000351193|NMD3 11.640296217721598 0.521594087909532 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KG]{M(Oxidation (M))|F}QE{M(Oxidation (M))|F}{I|L} 9 3 + 21.431 0.0 0.0 1.9455 1.9455 74.105 0.0 0.0 0.0 0.0166728945909682 5.756985571868157 0.0166728945909682 9.208187539523752 0 0.242992819099939 0.0 0.3494850021680094 0.8807196863200843 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KG]{M(Oxidation (M))|F}QE{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KG]{M(Oxidation (M))|F}[AG]E{M(Oxidation (M))|F}{I|L};[NP][VP]Q{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]{I|L} 1.9455;1.1096;0.5155 -;-;- 172 1 1.56 61573.4 1.0 5858 4662 10514 HBL1_DMSO_200M_050219_2,10522 HBL1_DMSO_200M_050219_2,10522,HAQKMVEFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10523 57.005 153.0 552690.0 25 0 31811.0 + 22205 LPQPKNLTV 9 122 505.3059855502945 0 505.3057433962822 PEAK CID FTMS 0 0 0 10514 404777.90625 0.4292789485803552 -7 0.757904052734375 9 Unmodified _LPQPKNLTV_ ENSG00000143294|ENST00000271526|PRCC 68.08070601005525 0.0150358085444205 4 PQ 2 7 22.123 0.0 0.0 2.1934 0.0 0.0 113.0836375050828 667.3792952601653 780.4629327652482 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.805462187404089 + PQ 2.1934 + + 271 + 1 1.56 67658.2 1.0 5859 4662 10514 HBL1_DMSO_200M_050219_2,10523 HBL1_DMSO_200M_050219_2,10523,LPQPKNLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10524 57.008 130.0 662150.0 25 0 87769.0 + 25379 NAYPYCRTI 9 98 550.7626828450902 1099.5108127569804 2 550.7629272341728 MULTI CID FTMS 0 0 0 10514 353244.46875 0.5883996933027885 -2 0.1961479187011718 10 Unmodified _NAYPYCRTI_ ENSG00000180957|ENST00000335272|PITPNB;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;nc|ENSG00000180957|P48739-2|PITPNB;nc|ENSG00000180957|P48739-3|PITPNB 32.78568957990786 0.1150597335874693 4 {[QG]|[NA]}YPY 5 4 46.07 0.0 0.0 4.19 0.0 0.0 0.0 488.22968469791255 488.22968469791255 33.85151878060192 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + {[QG]|[NA]}YPY 4.19 + + 145 + 1 1.56 69576.9 1.0 5860 4662 10514 HBL1_DMSO_200M_050219_2,10524 HBL1_DMSO_200M_050219_2,10524,NAYPYCRTI True True NAYPYCRTI 57.007978 550.762927234173 6166826.5 10514.0 ENSG00000180957|ENST00000335272|PITPNB;;nc|ENSG00000180957|P48739-2|PITPNB;;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;;nc|ENSG00000180957|P48739-3|PITPNB 3.591056664784749 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10525 57.013 170.0 1060700.0 25 0 328670.0 -1 0 50 1199.829803183594 0 1199.830371081829 PEAK CID FTMS 0 0 0 10514 343087.0625 0.2537768622924752 -5 0.5226860046386719 11 4 E 1 -1 6.9897 0.0 0.0 0.29152 0.0 0.0 1741.4165244923245 524.1621814393236 2265.578705931648 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.29152 - 7 + 1 1.56 154611.9 1.0 5861 4662 10514 HBL1_DMSO_200M_050219_2,10525 HBL1_DMSO_200M_050219_2,10525, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10526 57.015 121.0 628740.0 25 0 40597.0 + 41837 VPYGEFKSV 9 125 513.2691083658402 1024.5236637984804 2 513.2690307497978 MULTI CID FTMS 0 0 0 10514 313261.25 1.0 0 0.0 12 Unmodified _VPYGEFKSV_ ENSG00000166484|ENST00000395604|MAPK7;ENST00000486905.1_1_17:19281885-19283261:+|nuORF;ENST00000490660.2_1_17:19282213-19285121:+|nuORF;ENST00000572968.5_1_17:19282213-19283750:+|nuORF;nc|ENSG00000166484|Q13164-3|MAPK7 43.77239144664712 0.0547478964384323 4 VPY{[DA]|[EG]}{M(Oxidation (M))|F}KSV 9 0 + 59.095 0.0 0.0 5.7681 5.7681 75.46 0.0 0.0 0.0 31.163282261788865 4.857405846330778 4.857405846330778 2.3721186938815464 0 0.7971062485323517 1.154901959985743 0.2742275032520141 0.0 + + VPY{[DA]|[EG]}{M(Oxidation (M))|F}KSV;VPS{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}KSV;VT{I|L}EC{M(Oxidation (M))|F}KSV;VPS[YR]{[MS]|[{M(Oxidation (M))|F}A]}SV;VP{M(Oxidation (M))|F}VD{I|L}AP[PA];VP{M(Oxidation (M))|F}VDRRH;VP{M(Oxidation (M))|F}VCK[VP]H;VPS[YR]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};VPS[QT][QT]P[PA];VPS[DN]{[QV]|[N{I|L}]|[RA]|[KV]}V[PA] 5.7681;5.5365;4.9755;4.327;4.2324;3.765;3.6459;3.5989;2.8755;2.8492 +;-;-;-;-;-;-;-;-;- + 1415 + 1 1.56 65022.9 1.0 5862 4662 10514 HBL1_DMSO_200M_050219_2,10526 HBL1_DMSO_200M_050219_2,10526,VPYGEFKSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10527 57.018 132.0 445060.0 25 0 68178.0 + 26814 PAPPPPPVL 9 87 442.7662434121444 883.5179338910888 2 442.7654296755791 MULTI CID FTMS 0 0 0 10514 269026.5 0.4043983002288327 -7 0.757904052734375 13 Unmodified _PAPPPPPVL_ ENSG00000114790|ENST00000465093|ARHGEF26;nc|ENSG00000114790|Q96DR7-3|ARHGEF26;nc|ENSG00000114790|Q96DR7-4|ARHGEF26 56.04830969593885 0.0282699710924866 4 [PA]PPPP 6 3 41.215 0.0 0.0 4.6649 0.0 0.0 0.0 324.1933268742625 324.1933268742625 6.600971678920047 0.0 0.0 0.0 0 1.1549471895720984 1.5228787452803376 0.0 0.0 + [PA]PPPP 4.6649 + + 132 1 1.56 49037.0 1.0 5863 4662 10514 HBL1_DMSO_200M_050219_2,10527 HBL1_DMSO_200M_050219_2,10527,PAPPPPPVL True True PAPPPPPVL 57.017969 442.765429675579 33459162.0 10514.0 nc|ENSG00000114790|Q96DR7-4|ARHGEF26;;ENSG00000114790|ENST00000465093|ARHGEF26;;nc|ENSG00000114790|Q96DR7-3|ARHGEF26 3.4053441683451333 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10528 57.021 122.0 404830.0 25 0 77314.0 + 23158 LSQAMNNLRL 10 68 580.3161695515288 1158.6177861698577 2 580.3154785037041 MULTI CID FTMS 0 0 0 10514 234185.21875 1.0 0 0.0 14 Unmodified _LSQAMNNLRL_ REV__ENST00000367521.5_1_1:183907497-183907605:-|nuORF 5.296884461304476 0.7021353017287152 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.56 44621.1 1.0 5864 4662 10514 HBL1_DMSO_200M_050219_2,10528 HBL1_DMSO_200M_050219_2,10528,LSQAMNNLRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10529 57.024 175.0 160650.0 25 0 45843.0 -1 0 25 1138.1730281001028 3411.497254900509 3 1138.509082019329 MULTI CID FTMS 0 0 0 10514 155365.828125 0.3828129108580759 -1 0.1268959045410156 15 4 R 1 -1 5.4846 0.0 0.0 0.16077 0.0 0.0 2599.1496119335147 653.2072237604124 3252.356835693927 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.16077 - 3 + 1 1.56 34484.9 1.0 5865 4662 10514 HBL1_DMSO_200M_050219_2,10529 HBL1_DMSO_200M_050219_2,10529, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10530 57.027 141.0 371950.0 25 0 31791.0 + 17996 KRVQFADTL 9 95 359.87355642044724 1076.5988398615418 3 359.8728820681572 MULTI CID FTMS 0 0 0 10514 149543.625 0.147851565481021 -5 0.5226860046386719 16 Unmodified _KRVQFADTL_ ENSG00000219607|ENST00000405617|PPP1R3G 11.640296217721598 0.521594087909532 4 TK{I|L}{[QG]|[NA]}T{I|L} 7 6 22.228 0.0 0.0 2.0647 0.0 0.0 317.1592642644801 0.0 317.1592642644801 0.0 1.0572916690191647 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 TK{I|L}{[QG]|[NA]}T{I|L} 2.0647 - 71 + 1 1.56 45158.3 1.0 5866 4662 10514 HBL1_DMSO_200M_050219_2,10530 HBL1_DMSO_200M_050219_2,10530,KRVQFADTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10531 57.029 127.0 270070.0 25 0 25700.0 + -1 SEDALMLCL 9 78 534.24074106766 1066.46692920212 2 534.2406494021416 MULTI CID FTMS 0 0 0 10514 139869.390625 0.5735255694897788 -2 0.1961479187011718 17 Carbamidomethyl (C),Oxidation (M) _SEDALM(Oxidation (M))LC(Carbamidomethyl (C))L_ REV__ENSG00000166349|ENST00000299440|RAG1;REV__nc|ENSG00000166349|P15918-2|RAG1 13.50788311687929 0.4710407108020397 4 {I|L} 1 -1 11.783 0.0 0.0 1.1048 0.0 0.0 935.3719717820012 0.0 935.3719717820012 0.0 1.0693990997254057 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1048 + + 51 + 1 1.56 34267.6 1.0 5867 4662 10514 HBL1_DMSO_200M_050219_2,10531 HBL1_DMSO_200M_050219_2,10531,SEDALMLCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10532 57.032 141.0 285300.0 25 0 19508.0 + 22327 LPSILQAV 8 85 420.7632003273535 839.5118477215069 2 420.7630493044853 MULTI CID FTMS 0 0 0 10514 113648.734375 0.6669663659464836 -1 0.1268959045410156 18 Unmodified _LPSILQAV_ REV__ENSG00000165072|ENST00000377182|MAMDC2 9.347437153973935 0.7675937258251505 4 V 1 -1 11.594 0.0 0.0 1.381 0.0 0.0 722.4323779722866 0.0 722.4323779722866 0.0 -0.1889428044469987 -0.1889428044469987 0.0 0 0.0 0.0 0.0 0.0 V 1.381 + + 64 + 1 1.56 38212.2 1.0 5868 4662 10514 HBL1_DMSO_200M_050219_2,10532 HBL1_DMSO_200M_050219_2,10532,LPSILQAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10533 57.035 129.0 189840.0 25 0 14366.0 27006 PELHEDPTI 9 66 525.7578880377185 1049.501223142237 2 526.2653076052666 MULTI CID FTMS 0 0 0 10514 112118.0859375 0.1589276536907022 5 -0.2439155578613281 19 Unmodified _PELHEDPTI_ ENST00000366966.6_1_1:213134557-213139066:+|nuORF 7.910154910731844 0.6385446671287552 4 {I|L} 1 8 13.099 0.0 0.0 1.2481 0.0 0.0 918.4061436518058 0.0 918.4061436518058 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2481 + + 19 + 1 1.56 26280.2 1.0 5869 4662 10514 HBL1_DMSO_200M_050219_2,10533 HBL1_DMSO_200M_050219_2,10533,PELHEDPTI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10535 57.039 17.0 2041900.0 25 0 335970.0 + -1 EGKWNESCECE 11 49 685.7499676702942 1369.4853824073882 2 685.7515136599541 MULTI CID FTMS 0 0 0 10534 2329316.75 0.0990800863176884 -4 0.371856689453125 1 Carbamidomethyl (C) _EGKWNESC(Carbamidomethyl (C))ECE_ REV__ENSG00000088812|ENST00000262919|ATRN;REV__nc|ENSG00000088812|O75882-2|ATRN;REV__nc|ENSG00000088812|O75882-3|ATRN 1.3295316138638542 0.8688751186870782 4 YMWS 4 -1 25.222 0.0 0.0 1.8417 0.0 0.0 320.15216884583407 479.1068819635376 799.2590508093716 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 YMWS 1.8417 - 32 + 1 1.56 30564.3 1.0 5870 4663 10534 HBL1_DMSO_200M_050219_2,10535 HBL1_DMSO_200M_050219_2,10535,EGKWNESCECE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10536 57.053 800.0 261610.0 25 0 50176.0 + 32114 RVMEEIRNL 9 212 387.2134562033911 1158.6185392103732 3 387.2133666872978 MULTI CID FTMS 0 0 0 10534 25027.423828125 0.2736562164524478 1 -0.0179939270019531 2 Unmodified _RVMEEIRNL_ ENSG00000066136|ENST00000447388|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 34.93206674587334 0.1032771302489716 4 [RV]MEEK 6 4 45.087 0.0 0.0 3.8914 0.0 0.0 0.0 383.188033189142 383.188033189142 33.827490550119954 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.4247425010840047 0.1237125054200235 [RV]MEEK 3.8914 - 881 1 1.56 163354.1 0.9200000166893004 5871 4663 10534 HBL1_DMSO_200M_050219_2,10536 HBL1_DMSO_200M_050219_2,10536,RVMEEIRNL True True RVMEEIRNL 57.052863 387.213366687298 1313312.5 10534.0 ENSG00000066136|ENST00000447388|NFYC;;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC;;NFYC|p.R39Q|1|0.44|ENSG00000066136|chr1:40747544-40747544|G/A|missense_variant;;nc|ENSG00000066136|Q13952-5|NFYC;;ENST00000424419.6_1_1:41157373-41232429:+|nuORF 5.666553338368733 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10538 57.057 11.0 2547600.0 25 0 182540.0 + 29587 QLTPLRGTI 9 61 499.8036215756889 997.5926902181778 2 499.8034545779228 MULTI CID FTMS 0 0 0 10537 2964546.5 1.0 0 0.0 1 Unmodified _QLTPLRGTI_ REV__nc|ENSG00000159111|Q7Z7H8-2|MRPL10 24.020572477871973 0.2255576514309169 4 [{I|L}T][RP]AVQT{I|L} 9 -1 + 53.082 0.0 0.0 5.321 5.321 82.824 0.0 0.0 0.0 7.969837217489513 36.09243748081781 7.969837217489513 9.208187539523747 0 0.5 1.5228787452803376 0.0 0.0 [{I|L}T][RP]AVQT{I|L};[{I|L}T][RP]AV[AG]T{I|L};[NP]KKAVQT{I|L};[{I|L}T][RP]A[KA]E{I|L};[NP]KKAV[AG]T{I|L};[NP]KKA[KA]E{I|L} 5.321;4.398;3.3162;2.9402;2.3932;0.9354 -;-;-;-;-;- 131 1 1.56 33012.2 1.0 5872 4664 10537 HBL1_DMSO_200M_050219_2,10538 HBL1_DMSO_200M_050219_2,10538,QLTPLRGTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10539 57.058 31.0 1127000.0 25 0 143250.0 + 13903 HVVDVSVAV 9 72 462.7611985671394 923.5078442010788 2 462.7611266970634 MULTI CID FTMS 0 0 0 10537 1463358.375 0.9357148520663332 1 -0.0261802673339843 2 Unmodified _HVVDVSVAV_ ENSG00000150768|ENST00000280346|DLAT;ENST00000533297.1_1_11:111896132-111933256:+|nuORF 30.22481116460888 0.1466181017706357 4 [{I|L}P]PQSN 6 8 29.156 0.0 0.0 3.157 0.0 0.0 0.0 284.1633367150038 284.1633367150038 11.197986691477798 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5 0.0 [{I|L}P]PQSN 3.157 - 210 1 1.56 31329.5 1.0 5873 4664 10537 HBL1_DMSO_200M_050219_2,10539 HBL1_DMSO_200M_050219_2,10539,HVVDVSVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10540 57.059 26.0 1021000.0 25 0 90049.0 + 4017 DALRSGLTV 9 55 466.2639604463565 930.5133679595132 2 466.2641479372978 MULTI CID FTMS 0 0 0 10537 1161928.375 0.0058993655618041 10 -0.6669883728027344 3 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 17.11289562659939 0.3734572693229295 4 {[DA]|[EG]}[R{I|L}][SG]{I|L}TV 9 0 {[DA]|[EG]}[R{I|L}][SG]{I|L} + + 25.969 10.246 1.4382 2.7908 2.7908 45.525 0.0 0.0 0.0 0.0 7.778878593419659 0.0 0.0 0 0.5 0.0 0.0 0.0 + + {[DA]|[EG]}[R{I|L}][SG]{I|L}TV 2.7908 + + 32 + 1 1.56 25825.3 1.0 5874 4664 10537 HBL1_DMSO_200M_050219_2,10540 HBL1_DMSO_200M_050219_2,10540,DALRSGLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10541 57.061 45.0 1005700.0 25 0 68690.0 + 4622 DAYTVQQL 8 84 469.23519785925913 936.4558427853184 2 469.2350646853447 MULTI CID FTMS 0 0 0 10537 1081494.625 0.3246280528958752 3 -0.1790390014648437 4 Unmodified _DAYTVQQL_ ENSG00000055130|ENST00000325222|CUL1 32.116972079565 0.368454113111938 4 {[DA]|[EG]}YT 4 4 32.792 0.0 0.0 3.5017 0.0 0.0 0.0 483.25897934221206 483.25897934221206 10.133904811810304 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5 0.0 + {[DA]|[EG]}YT 3.5017 + + 132 1 1.56 41216.4 1.0 5875 4664 10537 HBL1_DMSO_200M_050219_2,10541 HBL1_DMSO_200M_050219_2,10541,DAYTVQQL False True DAYTVQQL 57.060623 469.235064685345 54028224.0 10537.0 ENSG00000055130|ENST00000325222|CUL1 6.076564311981201 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10542 57.063 97.0 531010.0 25 0 53369.0 + -1 GVCTCCIV 8 105 456.1927297890388 910.3709066448776 2 456.1928893923759 MULTI CID FTMS 0 0 0 10537 399819.9375 0.9672681020888112 1 -0.0261802673339843 5 2 Carbamidomethyl (C) _GVC(Carbamidomethyl (C))TC(Carbamidomethyl (C))CIV_ REV__ENSG00000005007|ENST00000262803|UPF1;REV__nc|ENSG00000005007|Q92900|UPF1 10.183394434864962 0.7604730176254005 4 {I|L}TGV 4 -1 20.539 0.0 0.0 2.2561 0.0 0.0 522.1383454649932 0.0 522.1383454649932 0.0 -2.393032336038079 -2.393032336038079 0.0 0 0.0 0.0 0.2887254899964357 0.0 {I|L}TGV 2.2561 - 215 + 1 1.56 46584.5 1.0 5876 4664 10537 HBL1_DMSO_200M_050219_2,10542 HBL1_DMSO_200M_050219_2,10542,GVCTCCIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10543 57.065 102.0 794020.0 25 0 79877.0 + -1 TALKIMKV 8 116 307.1932775035905 918.5580031109714 3 307.1928283572197 MULTI CID FTMS 0 0 0 10537 345360.4375 0.621754540175352 1 -0.0261802673339843 6 Oxidation (M) _TALKIM(Oxidation (M))KV_ nc|ENSG00000108788|Q9UH92|MLX;ENST00000585403.5_1_17:40721544-40721625:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;ENSG00000108788|ENST00000435881|MLX 21.53697664764585 0.591232569029014 4 TA{I|L}K{I|L}{M(Oxidation (M))|F}KV 8 -1 + 67.043 0.0 0.0 7.2987 7.2987 81.645 0.0 0.0 0.0 33.39948061694351 2.880650184996128 2.880650184996128 2.880650184996128 0 0.3252574989159953 1.6989700043360187 0.0 0.0 TA{I|L}K{I|L}{M(Oxidation (M))|F}KV;TA{I|L}K{I|L}{M(Oxidation (M))|F}VK;[K{I|L}][YT]K{I|L}[PG];[K{I|L}]S{I|L}K[{I|L}A]{M(Oxidation (M))|F} 7.2987;6.9851;1.6479;1.5459 +;-;-;- + 184 + 1 1.56 75323.4 1.0 5877 4664 10537 HBL1_DMSO_200M_050219_2,10543 HBL1_DMSO_200M_050219_2,10543,TALKIMKV False False TALKIMKV 57.064905 307.19282835722 5031119.0 10537.0 nc|ENSG00000108788|Q9UH92|MLX;;ENST00000585403.5_1_17:40721544-40721625:+|nuORF;;nc|ENSG00000108788|Q9UH92-2|MLX;;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;;ENSG00000108788|ENST00000435881|MLX 5.915340264638265 3.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10544 57.074 541.0 349400.0 25 0 35378.0 -1 ENWYQRMDFFR 11 145 825.3628813078659 1648.7112096825315 2 825.3619872927666 MULTI CID FTMS 0 0 0 10537 217404.453125 0.7090937102042455 1 -0.0261802673339843 7 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))ENWYQRM(Oxidation (M))DFFR_ ENST00000370153.6_2_1:100480902-100480953:+|nuORF 0.2690200627634905 0.8738786812967896 4 EAGAQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 11 -1 71.412 0.0 0.0 4.3314 0.0 0.0 451.17918593574376 0.0 451.17918593574376 0.0 45.29223280046341 0.0 0.0 0 0.7742275032520141 0.0 0.9604093769761876 1.579689690656103 EAGAQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 4.3314 - 7426 1 1.56 127627.3 1.0 5878 4664 10537 HBL1_DMSO_200M_050219_2,10544 HBL1_DMSO_200M_050219_2,10544,ENWYQRMDFFR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10545 57.076 58.0 491880.0 25 0 48816.0 -1 0 67 401.76475204044914 801.5149511476983 2 401.7645141482353 MULTI CID FTMS 0 0 0 10537 156858.125 0.9504158990254348 1 -0.0261802673339843 8 4 [{I|L}A]K{I|L}MKV 7 -1 [{I|L}A]K + + 19.936 16.655 5.3346 2.4872 2.4872 45.069 0.0 0.0 0.0 0.0 3.280101553050901 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 [{I|L}A]K{I|L}MKV 2.4872 - 64 + 1 1.56 29523.7 1.0 5879 4664 10537 HBL1_DMSO_200M_050219_2,10545 HBL1_DMSO_200M_050219_2,10545, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10546 57.079 154.0 424290.0 25 0 20095.0 -1 TALKIMKV 8 112 460.2858609113438 918.5571688894876 2 460.2870361208916 MULTI CID FTMS 0 0 0 10537 151532.046875 0.770731540230298 -2 0.0648765563964843 9 Oxidation (M) _TALKIM(Oxidation (M))KV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 28.486842064014134 0.4448922141344407 4 [TA]{I|L}K{I|L}{M(Oxidation (M))|F}KV 8 -1 + 44.619 0.0 0.0 4.8575 4.8575 84.783 0.0 0.0 0.0 27.40540356723385 11.515318870489466 11.515318870489466 22.22696153752341 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [TA]{I|L}K{I|L}{M(Oxidation (M))|F}KV;[VG][HV]{I|L}K{I|L}[PG];[VG][R{M(Oxidation (M))|F}][K{I|L}]TV;[K{I|L}]YTK{I|L}[PG];{[HG]|PP}[TP]{I|L}K{I|L}[PG];[{I|L}A][HA]{I|L}K{I|L}[PG] 4.8575;2.4378;1.5159;1.0777;0.80544;0.43987 +;-;-;-;-;- + 270 + 1 1.56 54008.2 1.0 5880 4664 10537 HBL1_DMSO_200M_050219_2,10546 HBL1_DMSO_200M_050219_2,10546,TALKIMKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10548 57.083 5.7 9515700.0 25 0 1382800.0 + 36568 TALKIMKV 8 83 301.86160933573194 902.562998607396 3 301.8614074587822 MULTI CID FTMS 0 0 0 10547 7667170.0 0.7727327242583513 2 -0.1528587341308593 1 Unmodified _TALKIMKV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 36.12702656103203 0.299085846329477 4 [TA]{I|L}K{I|L}MKV 8 0 + 66.874 0.0 0.0 7.4093 7.4093 88.477 0.0 0.0 0.0 47.99965927864699 10.84006381204913 10.84006381204913 7.7815125038364386 0 0.2887254899964357 1.6989700043360187 0.0 0.6989700043360187 + + [TA]{I|L}K{I|L}MKV;[TA]{I|L}KP{M(Oxidation (M))|F}KV 7.4093;6.5471 +;- + 134 + 1 1.56 49923.0 1.0 5881 4665 10547 HBL1_DMSO_200M_050219_2,10548 HBL1_DMSO_200M_050219_2,10548,TALKIMKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10549 57.084 15.0 3624300.0 25 0 553570.0 18100 KTKGAGGG 8 88 338.19400579686885 674.3734586605377 2 338.1934692263603 MULTI CID FTMS 0 0 0 10547 3545119.0 0.9835019957207308 2 -0.1528587341308593 2 Unmodified _KTKGAGGG_ ENST00000585091.1_1_17:79977515-79980737:-|nuORF 0.0 0.8243325171867699 4 EM{[MG]|[TS]} 4 7 3.2762 0.0 0.0 0.48582 0.0 0.0 208.1894856183609 0.0 208.1894856183609 0.0 -0.7031686256740945 -0.7031686256740945 0.0 0 0.0 0.0 0.0 0.0 EM{[MG]|[TS]} 0.48582 - 3 1 1.56 48049.2 1.0 5882 4665 10547 HBL1_DMSO_200M_050219_2,10549 HBL1_DMSO_200M_050219_2,10549,KTKGAGGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10550 57.086 55.0 1227200.0 25 0 102610.0 + 21217 LPDGRIIKV 9 87 505.8221480641613 1009.6297431951224 2 505.8235656619072 MULTI CID FTMS 0 0 0 10547 771383.3125 0.0278607096370885 -3 0.0910568237304687 3 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 24.881564428377168 0.2146028316269493 4 {I|L}PD 3 6 42.294 0.0 0.0 4.189 0.0 0.0 0.0 681.4421356530027 681.4421356530027 6.073777260176236 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {I|L}PD 4.189 + + 141 + 1 1.56 54971.6 1.0 5883 4665 10547 HBL1_DMSO_200M_050219_2,10550 HBL1_DMSO_200M_050219_2,10550,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10551 57.088 127.0 712110.0 25 0 70001.0 + 31243 RLTEEFQNV 9 113 568.290500146283 1134.5664473593658 2 568.2909423708916 MULTI CID FTMS 0 0 0 10547 732391.875 0.5015991045904635 2 -0.1528587341308593 4 Unmodified _RLTEEFQNV_ ENSG00000122687|ENST00000242257|MRM2;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;ENST00000486040.1_1_7:2274759-2277695:-|nuORF 55.50274090549119 0.0285720310785888 4 [R{I|L}]TEE{M(Oxidation (M))|F}QNV 9 0 + 64.764 0.0 0.0 5.7083 5.7083 81.505 0.0 0.0 0.0 3.6523403976488567 48.63773646941111 3.6523403976488567 6.682437647924218 0 0.5 0.0 0.6382104921644451 0.6549471895720984 + + [R{I|L}]TEE{M(Oxidation (M))|F}QNV;[AG]DKKE{M(Oxidation (M))|F}QNV;[KG][KG]EE{M(Oxidation (M))|F}QNV;[R{I|L}]TEE{M(Oxidation (M))|F}[AG]NV;[R{I|L}]TEE{M(Oxidation (M))|F}QGGV;[AG]NV{[WT]|[RM]}{M(Oxidation (M))|F}QNV;[KG]E[KG]E{M(Oxidation (M))|F}QNV;{[QD]|[EN]|[WG]|[KD]|[RS]}KKE{M(Oxidation (M))|F}QNV;[AG][VS][KG]E{M(Oxidation (M))|F}QNV;[AG]DKKE{M(Oxidation (M))|F}[AG]NV 5.7083;5.1193;5.0416;4.8967;4.8967;4.7168;4.5079;4.4334;4.3513;4.3115 +;-;-;-;-;-;-;-;-;- + 608 1 1.56 72121.5 1.0 5884 4665 10547 HBL1_DMSO_200M_050219_2,10551 HBL1_DMSO_200M_050219_2,10551,RLTEEFQNV True True RLTEEFQNV 57.088421 568.290942370892 21666282.0 10547.0 ENST00000486040.1_1_7:2274759-2277695:-|nuORF;;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;;ENSG00000122687|ENST00000242257|MRM2 6.120371182759603 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10552 57.096 429.0 388360.0 25 0 28273.0 + 30762 DAFHEKYTI 9 185 561.7740073356346 1121.533461738069 2 562.2748901247978 MULTI CID FTMS 0 0 0 10547 253150.9375 1.0 0 0.0 5 Unmodified _RHTDGWHTL_ nc|ENSG00000135775|Q14746-2|COG2;ENST00000494371.5_1_1:230807261-230814859:+|nuORF;ENSG00000135775|ENST00000366669|COG2 26.88365393820708 0.1891292719743517 4 {[DA]|[EG]}{M(Oxidation (M))|F}HEKY{[NV]|[RG]} 9 9 + 34.083 0.0 0.0 3.039 3.039 67.797 0.0 0.0 0.0 5.915409481863822 0.8214215303265675 0.8214215303265675 3.425230508543041 0 0.3494850021680094 1.154901959985743 0.4247425010840047 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}HEKY{[NV]|[RG]};{[DA]|[EG]}{M(Oxidation (M))|F}HEKT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QG]|[NA]}{M(Oxidation (M))|F}HE[YK]T{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}HTRY{[NV]|[RG]};{[SA]|[TG]}{[CA]|SS}HE[YK]T{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}HTRT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[{M(Oxidation (M))|F}H]|[RQ]}EGEKY{[NV]|[RG]};{[QG]|[NA]}{M(Oxidation (M))|F}HE[YK]{I|L}T;[RH]TKEH[NS]N;[RH]T[WH]{I|L}C(Carbamidomethyl (C)){I|L} 3.039;2.7335;2.5115;2.4157;2.2489;2.1103;1.8522;1.7508;1.7038;1.688 -;-;-;-;-;-;-;-;-;- 4221 1 1.56 130036.8 1.0 5885 4665 10547 HBL1_DMSO_200M_050219_2,10552 HBL1_DMSO_200M_050219_2,10552,RHTDGWHTL False False DAFHEKYTI 57.096069 562.274890124798 1457472.5 10547.0 nc|ENSG00000135775|Q14746-2|COG2;;ENST00000494371.5_1_1:230807261-230814859:+|nuORF;;ENSG00000135775|ENST00000366669|COG2 6.690319856007894 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10553 57.105 489.0 171860.0 25 0 14476.0 + 16980 KIMDRFEEV 9 116 583.7976137102844 1165.5806744873687 2 583.7981445193291 MULTI CID FTMS 0 0 0 10547 150014.015625 1.0 0 0.0 6 Unmodified _KIVTDWQNY_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;chr4:1740002-1740832|13|33.23|0.17|7.63|+|2|TACC3,None|1;ENST00000470808.1_1_4:1741140-1742845:+|nuORF;chr4:1740002-1740828|13|35.77|0.33|6.76|+|2|TACC3,None|1 13.042465956692816 0.4836390050082244 4 K{I|L}V 3 6 34.693 0.0 0.0 2.9764 0.0 0.0 0.0 822.2976168268186 822.2976168268186 20.71333751784365 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + K{I|L}V 2.9764 + + 82 + 1 1.56 69067.4 1.0 5886 4665 10547 HBL1_DMSO_200M_050219_2,10553 HBL1_DMSO_200M_050219_2,10553,KIVTDWQNY False False KIMDRFEEV 57.104715 583.798144519329 976092.6875 10547.0 chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENSG00000013810|ENST00000313288|TACC3;;chr4:1740002-1740832|13|33.23|0.17|7.63|+|2|TACC3,None|1;;ENST00000470808.1_1_4:1741140-1742845:+|nuORF;;chr4:1740002-1740828|13|35.77|0.33|6.76|+|2|TACC3,None|1 0.9310278097788492 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10554 57.116 675.0 90703.0 25 0 20714.0 -1 0 47 1129.123062160852 3384.3473570827564 3 1129.458911120892 MULTI CID FTMS 0 0 0 10547 128015.25 1.0 0 0.0 7 4 QK 2 -1 11.938 0.0 0.0 0.35275 0.0 0.0 2481.9239084517003 643.2256563775999 3125.1495648293003 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.0 QK 0.35275 - 60 + 1 1.56 54940.2 1.0 5887 4665 10547 HBL1_DMSO_200M_050219_2,10554 HBL1_DMSO_200M_050219_2,10554, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10555 57.126 543.0 119060.0 25 0 14852.0 + -1 CMYFMVVRYFY 11 85 789.8481336129223 0 789.8377563357353 PEAK CID FTMS 0 0 0 -1 0 8 Carbamidomethyl (C) _C(Carbamidomethyl (C))MYFMVVRYFY_ REV__ENST00000313349.3_1_2:64861977-64862394:-|nuORF 3.2813086475875832 0.4761840153648598 4 {M(Oxidation (M))|F}WQQ[HD]{M(Oxidation (M))|F} 7 -1 25.203 0.0 0.0 1.5975 0.0 0.0 408.2190200561195 178.05109583072502 586.2701158868446 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 1.274227503252014 {M(Oxidation (M))|F}WQQ[HD]{M(Oxidation (M))|F} 1.5975 - 349 + 1 1.56 52814.5 1.0 5888 4665 10547 HBL1_DMSO_200M_050219_2,10555 HBL1_DMSO_200M_050219_2,10555,CMYFMVVRYFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10557 57.13 5.1 14316000.0 25 0 1518300.0 + 44674 YPFKPPKV 8 76 488.2868778785377 974.5592028238756 2 488.2870056033134 MULTI CID FTMS 0 0 0 10556 10590131.0 0.348273649593028 -9 0.6608543395996094 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 39.957323273325 0.2350051964751539 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 64.747 0.0 0.0 6.6437 6.6437 92.367 0.0 0.0 0.0 20.13296575220324 4.569940744530356 4.569940744530356 26.15356566548286 0 0.9163865622122672 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[KP]PYV;[KP]PK{M(Oxidation (M))|F}PYV;[KP]{M(Oxidation (M))|F}[KP]PYV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[KP]PYV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.6437;3.9601;3.4236;2.1174;2.0361;1.7731;0.50223 +;-;-;-;-;-;- + 189 + 1 1.56 60628.4 1.0 5889 4666 10556 HBL1_DMSO_200M_050219_2,10557 HBL1_DMSO_200M_050219_2,10557,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10558 57.132 22.0 2580200.0 25 0 252630.0 + 36571 TALKIMKV 8 80 452.2882646365251 902.5619763398504 2 452.2885619997978 MULTI CID FTMS 0 0 0 10556 2496390.0 0.4978821872879382 3 -0.2966804504394531 2 Unmodified _TALKIMKV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 86.33184430468982 0.0641340886812316 4 TA{I|L}K{I|L}MKV 8 0 + 88.714 0.0 0.0 9.8292 9.8292 87.975 0.0 0.0 0.0 31.8943306386236 4.259687322722812 4.259687322722812 4.259687322722812 0 1.9916440611282624 1.6989700043360187 0.0 0.3494850021680094 + + TA{I|L}K{I|L}MKV;TA{I|L}K{I|L}MVK;V[VS]K{I|L}MKV;V[VS]K{I|L}MVK 9.8292;9.3572;6.1145;5.6426 +;-;-;- + 257 + 1 1.56 48584.2 1.0 5890 4666 10556 HBL1_DMSO_200M_050219_2,10558 HBL1_DMSO_200M_050219_2,10558,TALKIMKV True True TALKIMKV 57.131514 452.288561999798 223479348.0 10556.0 nc|ENSG00000108788|Q9UH92|MLX;;ENST00000585403.5_1_17:40721544-40721625:+|nuORF;;nc|ENSG00000108788|Q9UH92-2|MLX;;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;;ENSG00000108788|ENST00000435881|MLX 6.6478830973307295 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10559 57.133 6.1 11783000.0 25 0 1830800.0 + 21220 LPDGRIIKV 9 89 337.55035122418985 1009.6292242727696 3 337.5500671267509 MULTI CID FTMS 0 0 0 10556 7502521.5 0.1132849982372738 -2 0.0732917785644531 3 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 19.62595529434964 0.305431704817896 4 {I|L}PDV 4 5 33.672 0.0 0.0 3.3351 0.0 0.0 0.0 582.3745211236936 582.3745211236936 8.222192947339195 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {I|L}PDV 3.3351 - 109 + 1 1.56 65645.6 1.0 5891 4666 10556 HBL1_DMSO_200M_050219_2,10559 HBL1_DMSO_200M_050219_2,10559,LPDGRIIKV False True LPDGRIIKV 57.132692 337.550067126751 2249602224.0 10556.0 ENSG00000138071|ENST00000260641|ACTR2;;nc|ENSG00000138071|P61160-2|ACTR2 4.836992581685384 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10560 57.142 504.0 132720.0 25 0 10451.0 -1 0 53 909.610449151608 3634.412690740032 4 910.1125976443292 MULTI CID FTMS 0 0 0 10556 538630.375 1.0 0 0.0 4 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.19232 0.0 0.0 2951.031173261319 533.2739351861936 3484.305108447513 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19232 - 13 + 1 1.56 58743.2 1.0 5892 4666 10556 HBL1_DMSO_200M_050219_2,10560 HBL1_DMSO_200M_050219_2,10560, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10561 57.144 116.0 548450.0 25 0 51459.0 + 44138 YLDPAQQNL 9 113 531.2664098941002 1060.5182668550003 2 531.2660400271416 MULTI CID FTMS 0 0 0 10556 384570.0 0.4034452622398794 3 -0.2966804504394531 5 Unmodified _YLDPAQQNL_ ENST00000421406.1_1_1:247353282-247372753:-|nuORF 49.93300154707207 0.0405168250806675 4 [Y{I|L}]DPAQQ{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 50.85 0.0 0.0 4.7948 4.7948 80.617 0.0 0.0 0.0 15.90902994973036 5.642492736872597 5.642492736872597 9.208187539523747 0 0.6747425010840047 2.0 0.0 0.0 + + [Y{I|L}]DPAQQ{[QV]|[N{I|L}]|[RA]|[KV]};[Y{I|L}]DPA[AG]Q{[QV]|[N{I|L}]|[RA]|[KV]};[Y{I|L}]DPAQ[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YPAQQ{[QV]|[N{I|L}]|[RA]|[KV]};[Y{I|L}]DPA[AG][AG]{[QV]|[N{I|L}]|[RA]|[KV]};[Y{I|L}]DM[RH]{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YPA[AG]Q{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YPAQ[AG]{[QV]|[N{I|L}]|[RA]|[KV]};[PA]QDQ{I|L}Y{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}Q{[CT]|[{M(Oxidation (M))|F}G]}QQ{[QV]|[N{I|L}]|[RA]|[KV]} 4.7948;3.9266;3.9266;3.2947;3.0624;2.6998;2.4264;2.4264;2.0245;1.93 +;-;-;-;-;-;-;-;-;- + 791 1 1.56 58138.1 1.0 5893 4666 10556 HBL1_DMSO_200M_050219_2,10561 HBL1_DMSO_200M_050219_2,10561,YLDPAQQNL True True YLDPAQQNL 57.14406 531.266040027142 14371144.0 10556.0 ENST00000421406.1_1_1:247353282-247372753:-|nuORF 6.352155526479085 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10562 57.148 200.0 393340.0 25 0 32075.0 + 45488 YTLREVDTV 9 128 548.28822999682 1094.5619070604398 2 548.2891113162041 MULTI CID FTMS 0 0 0 10556 333501.875 0.3704420043882135 4 -0.3425025939941406 6 Unmodified _YTLREVDTV_ ENSG00000106268|ENST00000356714|NUDT1;nc|ENSG00000106268|P36639-1|NUDT1;nc|ENSG00000106268|P36639-2|NUDT1;nc|ENSG00000106268|P36639-3|NUDT1 74.19965305603844 0.0194755241623067 4 [YT]{I|L}{[RE]|[WV]}VDTV 9 0 + 74.432 0.0 0.0 6.8002 6.8002 90.068 0.0 0.0 0.0 9.940965235048154 46.016055957898416 9.940965235048154 10.13051521653523 0 1.610924374808178 1.3010299956639813 1.0356668758921828 0.2614393726401688 + + [YT]{I|L}{[RE]|[WV]}VDTV;[{M(Oxidation (M))|F}V]AV[{M(Oxidation (M))|F}V]VDTV;[VS]MV[{M(Oxidation (M))|F}V]VDTV;[{M(Oxidation (M))|F}V]AV[VP]TYTV;[{I|L}T]Y{[RE]|[WV]}VDTV;[VS]MV[VP]TYTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GV[{M(Oxidation (M))|F}V]VDTV;W{M(Oxidation (M))|F}V{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}V;{[ES]|[DT]|[{I|L}C]}V[{I|L}A]YVDTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T][DV]VDTV 6.8002;5.8747;5.3592;5.3246;4.8624;4.8091;4.5252;4.4851;4.464;4.3899 +;-;-;-;-;-;-;-;-;- + 1766 1 1.56 67416.9 1.0 5894 4666 10556 HBL1_DMSO_200M_050219_2,10562 HBL1_DMSO_200M_050219_2,10562,YTLREVDTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10563 57.159 627.0 325490.0 25 0 26249.0 + -1 CDVCDYCCSHF 11 138 704.7237994665205 1407.433045999841 2 704.7247802615166 MULTI CID FTMS 0 0 0 10556 300358.75 0.47571754232566 -1 0.0471115112304687 7 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))DVC(Carbamidomethyl (C))DYCCSHF_ REV__ENSG00000169962|ENST00000339381|TAS1R3 2.9952420565917617 0.861016188266951 4 SV{[QG]|[NA]} 4 -1 29.693 0.0 0.0 2.1097 0.0 0.0 1018.2562464832748 0.0 1018.2562464832748 0.0 16.505149978319906 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 SV{[QG]|[NA]} 2.1097 - 89 1 1.56 146794.5 1.0 5895 4666 10556 HBL1_DMSO_200M_050219_2,10563 HBL1_DMSO_200M_050219_2,10563,CDVCDYCCSHF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10564 57.173 800.0 474610.0 25 0 37371.0 -1 VGSLYPEMSA 10 281 357.16711825763497 0 357.1672546267509 PEAK CID FTMS 0 0 0 10556 288374.8125 1.0 0 0.0 8 Oxidation (M) _VGSLYPEM(Oxidation (M))SA_ ENSG00000204843|ENST00000628224|DCTN1;ENST00000466110.5_1_2:74593906-74595252:-|nuORF;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 1.9063754702782607 0.3961065659209837 4 P 1 -1 3.9794 0.0 0.0 0.55865 0.0 0.0 487.1715950584356 125.07247339420157 612.2440684526372 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.55865 + + 11 + 1 1.56 292486.8 0.9900000095367432 5896 4666 10556 HBL1_DMSO_200M_050219_2,10564 HBL1_DMSO_200M_050219_2,10564,VGSLYPEMSA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10565 57.178 279.0 595400.0 25 0 91887.0 + 1551 ALLCACTA 8 170 383.1854876102344 764.3564222872687 2 383.1852905154228 MULTI CID FTMS 0 0 0 10556 247030.515625 0.2322877083851733 -1 0.0471115112304687 9 Unmodified _ALLCACTA_ REV__ENSG00000132749|ENST00000255087|TESMIN 28.17323086031832 0.4514957916281387 4 [{I|L}A]{I|L}QV 5 -1 40.92 0.0 0.0 5.3535 0.0 0.0 0.0 237.00129114322505 237.00129114322505 27.95855197679897 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.0 0.5 [{I|L}A]{I|L}QV 5.3535 - 119 + 1 1.56 129093.6 1.0 5897 4666 10556 HBL1_DMSO_200M_050219_2,10565 HBL1_DMSO_200M_050219_2,10565,ALLCACTA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10566 57.183 255.0 445640.0 25 0 53562.0 + 15498 IPTDPAVL 8 140 413.2385038065141 824.4624546798283 2 413.2393981814384 MULTI CID FTMS 0 0 0 10556 247930.890625 0.459657384476283 -6 0.3343162536621094 10 Unmodified _IPTDPAVL_ REV__ENSG00000157500|ENST00000288266|APPL1;REV__ENST00000482800.5_1_3:57261911-57301862:+|nuORF 2.889219685676258 0.8067950007271085 4 {I|L} 1 -1 11.594 0.0 0.0 1.4062 0.0 0.0 693.3673751893971 0.0 693.3673751893971 0.0 1.6789605096159654 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4062 + + 35 + 1 1.56 91056.4 1.0 5898 4666 10556 HBL1_DMSO_200M_050219_2,10566 HBL1_DMSO_200M_050219_2,10566,IPTDPAVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10567 57.194 683.0 401160.0 25 0 19839.0 + 31233 RLSELGITQA 10 223 544.3082112033661 1086.601869473532 2 544.3099853396416 MULTI CID FTMS 0 0 0 10556 237716.125 0.8869417230761768 -1 0.0471115112304687 11 Unmodified _RLSELGITQA_ ENSG00000171241|ENST00000303383|SHCBP1 26.020703789607367 0.3840598856887971 4 [QT][KQ]{I|L}G{I|L}TAQ 10 6 + 42.667 0.0 0.0 3.9266 3.9266 65.154 0.0 0.0 0.0 0.7580866797920791 6.607942721838782 0.7580866797920791 0.7580866797920791 0 0.70802304749963 0.0 0.6861818737241735 0.0819755355160706 [QT][KQ]{I|L}G{I|L}TAQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KP]{I|L}G{I|L}TAQ;{[CP]|[EA]}T[{I|L}A]{I|L}G{I|L}TAQ;{[SA]|[TG]}A[KQ]{I|L}G{I|L}TAQ;{[CP]|[EA]}TVVVG{I|L}TAQ;[VS]D[{I|L}A]{I|L}G{I|L}TAQ;[VS]{I|L}W{I|L}G{I|L}TAQ;[KP]PY{I|L}G{I|L}TAQ;[VS]DVVVG{I|L}TAQ;{[TV]|[{I|L}S]}VW{I|L}G{I|L}TAQ 3.9266;3.8568;3.8463;3.5822;3.4072;3.3706;3.3271;3.0957;2.9315;2.9145 -;-;-;-;-;-;-;-;-;- 3786 1 1.56 208796.7 1.0 5899 4666 10556 HBL1_DMSO_200M_050219_2,10567 HBL1_DMSO_200M_050219_2,10567,RLSELGITQA False True RLSELGITQA 57.194398 544.309985339642 2226814.25 10556.0 ENSG00000171241|ENST00000303383|SHCBP1 4.371206760406494 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10568 57.202 340.0 364380.0 25 0 33722.0 + 22056 LPPPPPPHL 9 141 482.78449894353474 963.5544449538696 2 482.7849609255791 MULTI CID FTMS 0 0 0 10556 192260.25 0.0995991767770414 26 -2.575386047363281 12 Unmodified _LPPPPPPHL_ ENSG00000108349|ENST00000264645|CASC3 56.04830969593885 0.0282699710924866 4 {I|L}PPPPPPH{I|L} 9 0 + 80.182 0.0 0.0 8.3215 8.3215 89.354 0.0 0.0 0.0 66.687522094009 12.403405327429413 12.403405327429413 6.627578316815743 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + {I|L}PPPPPPH{I|L};{I|L}PPPPPHP{I|L};{I|L}YKPPPH{I|L};{I|L}PPP[YK]H{I|L};{I|L}PP[YK]PH{I|L};{I|L}P[YK]PPH{I|L};{I|L}YKPPHP{I|L};{I|L}P[YK]PHP{I|L};{I|L}PP[YK]HP{I|L};{I|L}YK[YK]H{I|L} 8.3215;7.6337;6.2175;6.0156;6.0156;6.0156;5.5297;5.3278;5.3278;3.9187 +;-;-;-;-;-;-;-;-;- + 519 + 1 1.56 99631.2 1.0 5900 4666 10556 HBL1_DMSO_200M_050219_2,10568 HBL1_DMSO_200M_050219_2,10568,LPPPPPPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10569 57.204 121.0 657250.0 25 0 49698.0 + + 33929 QVPEKLDVV 9 110 513.7945459874438 1025.5745390416876 2 513.7946655154228 MULTI CID FTMS 0 0 0 10556 182223.96875 0.2506919303241705 -3 0.0912857055664062 13 Unmodified _SLGPIPQTTL_ ENSG00000042445|ENST00000295802|RETSAT;ENST00000490291.1_1_2:85578731-85581633:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT 20.453626601364224 0.5043500229302764 4 [EP]K{I|L}DV 6 -1 32.427 0.0 0.0 3.1618 0.0 0.0 0.0 341.18012932028324 341.18012932028324 -0.0337566591755802 0.0 -0.0337566591755802 0.0 0 0.0 0.585026652029182 0.5941876774005248 0.0 [EP]K{I|L}DV 3.1618 - 247 1 1.56 68233.2 1.0 5901 4666 10556 HBL1_DMSO_200M_050219_2,10569 HBL1_DMSO_200M_050219_2,10569,SLGPIPQTTL False False QVPEKLDVV 57.204237 513.794665515423 6211307.0 10556.0 ENSG00000042445|ENST00000295802|RETSAT;;ENST00000490291.1_1_2:85578731-85581633:-|nuORF;;nc|ENSG00000042445|Q6NUM9-2|RETSAT 0.9982770284016927 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10570 57.218 800.0 178510.0 25 0 12841.0 + 10910 KQMENDIQL 9 185 558.7907542265934 1115.5669555199868 2 559.7794677615166 MULTI CID FTMS 0 0 0 10556 31824.052734375 0.4741597864541265 -1 0.0471115112304687 14 Unmodified _GAIMGIQGEIQ_ nc|ENSG00000138778|Q02224-3|CENPE;ENSG00000138778|ENST00000265148|CENPE 13.90604991867851 0.7458848613461305 4 {[TV]|[{I|L}S]}N[C(Carbamidomethyl (C))R]D{I|L} 7 9 21.673 0.0 0.0 1.9428 0.0 0.0 0.0 254.15281567175705 254.15281567175705 8.03750539821554 0.0 0.0 0.0 0 0.0 0.5686362358410126 0.5418727718234408 0.7134679910804405 {[TV]|[{I|L}S]}N[C(Carbamidomethyl (C))R]D{I|L} 1.9428 - 1250 1 1.56 111540.1 0.800000011920929 5902 4666 10556 HBL1_DMSO_200M_050219_2,10570 HBL1_DMSO_200M_050219_2,10570,GAIMGIQGEIQ False False KQMENDIQL 57.218071 559.779467761517 2370497.5 10556.0 nc|ENSG00000138778|Q02224-3|CENPE;;ENSG00000138778|ENST00000265148|CENPE 2.531519651412964 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10571 57.232 800.0 66556.0 25 0 5340.1 -1 0 74 951.411399641802 2851.212369525606 3 952.4142944216728 MULTI CID FTMS 0 0 0 10556 68804.921875 0.7473369793500813 1 -0.1057472229003906 15 4 TY 2 -1 8.5835 0.0 0.0 0.30105 0.0 0.0 2157.951396480488 426.1258028619751 2584.0771993424623 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TY 0.30105 - 162 + 1 1.56 44579.4 0.6100000143051147 5903 4666 10556 HBL1_DMSO_200M_050219_2,10571 HBL1_DMSO_200M_050219_2,10571, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10573 57.236 41.0 1211400.0 25 0 126750.0 + 44817 YPNKYESVI 9 83 556.7846092152754 1111.5546654973507 2 556.7848998904228 MULTI CID FTMS 0 0 0 10572 1878654.625 1.0 0 0.0 1 Unmodified _YPNKYESVI_ ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1 38.17557092003332 0.0854718145212029 4 [NP]KYESYV{I|L} 9 2 + 50.588 0.0 0.0 4.5511 4.5511 75.019 0.0 0.0 0.0 3.2568864632742844 7.75752837077448 3.2568864632742844 5.255762612236907 0 0.805462187404089 0.0 0.7742275032520141 0.0 [NP]KYESYV{I|L};[NP]KYEYSV{I|L};[NP]KYESVY{I|L} 4.5511;4.0783;3.6721 -;-;- 214 1 1.54 43206.1 1.0 5904 4667 10572 HBL1_DMSO_200M_050219_2,10573 HBL1_DMSO_200M_050219_2,10573,YPNKYESVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10574 57.24 215.0 560410.0 25 0 41712.0 + + 35684 SVDGVIKEV 9 137 473.2710007253411 944.5274485174822 2 473.2701599001884 MULTI CID FTMS 0 0 0 10572 299552.90625 0.2358924605016357 3 -0.23675537109375 2 Unmodified _SVERKEVV_ ENST00000554482.1_1_14:74947450-74959914:-|nuORF;nc|ENSG00000119655|P61916-2|NPC2;ENSG00000119655|ENST00000555619|NPC2 23.1484247019978 0.5573009939494978 4 {[TV]|[{I|L}S]}AEG{I|L}KEV 9 -1 + 51.831 0.0 0.0 5.4875 5.4875 78.422 0.0 0.0 0.0 10.38364391835536 4.771212547196626 4.771212547196626 4.771212547196626 0 0.6861818737241735 1.6989700043360187 0.2396518287104437 0.0 {[TV]|[{I|L}S]}AEG{I|L}KEV;{[TV]|[{I|L}S]}AEG{I|L}KD{I|L};{[TV]|[{I|L}S]}AW{I|L}KEV;{[TV]|[{I|L}S]}AEG{I|L}[VG]TV;[VS]DVG{I|L}KEV;{[TV]|[{I|L}S]}AW{I|L}KD{I|L};{[TV]|[{I|L}S]}AEG{I|L}[VG]S{I|L};{[TV]|[{I|L}S]}[RD]VKEV;{[TV]|[{I|L}S]}AEG[R{I|L}]TV;{[TV]|[{I|L}S]}AW{I|L}[VG]TV 5.4875;4.9824;4.8017;4.7367;4.3882;4.2965;4.2316;4.1762;4.0452;4.0452 -;-;-;-;-;-;-;-;-;- 1488 + 1 1.54 95659.2 1.0 5905 4667 10572 HBL1_DMSO_200M_050219_2,10574 HBL1_DMSO_200M_050219_2,10574,SVERKEVV False False SVDGVIKEV 57.240412 473.270159900188 512585.40625 10572.0 ENST00000554482.1_1_14:74947450-74959914:-|nuORF;;nc|ENSG00000119655|P61916-2|NPC2;;ENSG00000119655|ENST00000555619|NPC2 0.9419449840982757 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10575 57.242 18.0 3296800.0 25 0 733520.0 + 4462 DAYALNHTL 9 78 509.2535253747258 1016.4924978162516 2 509.2536804080009 MULTI CID FTMS 0 0 0 10572 2604998.75 0.0085865896707515 -4 0.1970329284667968 3 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 85.64151623876279 0.0161498729896241 4 {[DA]|[EG]}YA{I|L}NH[{I|L}T] 9 0 + 77.642 0.0 0.0 7.6382 7.6382 91.11 0.0 0.0 0.0 37.81665831563508 27.37643016799588 27.37643016799588 9.208187539523747 0 0.805462187404089 1.6989700043360187 2.3723637474483468 0.0 + + {[DA]|[EG]}YA{I|L}NH[{I|L}T];{[DA]|[EG]}YA{I|L}GGH[{I|L}T];{[DA]|[EG]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SNH[{I|L}T];{[DA]|[EG]}[TP]V{I|L}AD{[ES]|[DT]|[{I|L}C]};[HN]{I|L}TA{I|L}Y{[DA]|[EG]};[HN]{I|L}T{I|L}AY{[DA]|[EG]};[HT]{I|L}NA{I|L}Y{[DA]|[EG]};[HT]{I|L}N{I|L}AY{[DA]|[EG]};{[DA]|[EG]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SGGH[{I|L}T];{[CT]|[{M(Oxidation (M))|F}G]}{[ES]|[DT]|[{I|L}C]}{I|L}NH[{I|L}T] 7.6382;6.7323;3.7394;3.4137;3.2571;3.1315;3.0111;2.8856;2.8335;2.7946 +;-;-;-;-;-;-;-;-;- + 332 + 1 1.54 54733.5 1.0 5906 4667 10572 HBL1_DMSO_200M_050219_2,10575 HBL1_DMSO_200M_050219_2,10575,DAYALNHTL True True DAYALNHTL 57.241591 509.253680408001 9308394496.0 10572.0 ENSG00000110777|ENST00000393067|POU2AF1 9.424105644226074 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10576 57.243 66.0 1164300.0 25 0 162890.0 -1 WSCCWCLDEAN 11 89 693.7473585381757 1385.4801641431511 2 693.7482177615166 MULTI CID FTMS 0 0 0 10572 1173902.625 0.8621337303100579 -1 0.1057472229003906 4 Carbamidomethyl (C) _WSC(Carbamidomethyl (C))CWCLDEAN_ ENSG00000168411|ENST00000361070|RFWD3 1.3295316138638542 0.8688751186870782 4 YV{M(Oxidation (M))|F}DAS 6 -1 46.573 0.0 0.0 3.3615 0.0 0.0 221.07594158631383 479.1070650690063 700.1830066553201 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4802046884880935 0.0 YV{M(Oxidation (M))|F}DAS 3.3615 - 119 + 1 1.54 63462.4 1.0 5907 4667 10572 HBL1_DMSO_200M_050219_2,10576 HBL1_DMSO_200M_050219_2,10576,WSCCWCLDEAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10577 57.245 74.0 2693300.0 25 0 316220.0 + 26887 PDGRIIKV 8 119 449.27944708668826 896.5443412401765 2 449.2792846560478 MULTI CID FTMS 0 0 0 10572 867243.125 0.8801612516910698 -1 0.1057472229003906 5 Unmodified _PDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 69.10491478415734 0.1133161663954314 4 PDVN{I|L}{I|L}K 7 3 57.33 0.0 0.0 6.3946 0.0 0.0 0.0 114.0566424005492 114.0566424005492 10.65552802072581 0.0 0.0 0.0 0 2.0924778212679485 1.6989700043360187 0.0 0.6747425010840047 PDVN{I|L}{I|L}K 6.3946 - 461 + 1 1.54 156397.2 1.0 5908 4667 10572 HBL1_DMSO_200M_050219_2,10577 HBL1_DMSO_200M_050219_2,10577,PDGRIIKV True True PDGRIIKV 57.244897 449.279284656048 17215718.0 10572.0 ENSG00000138071|ENST00000260641|ACTR2;;nc|ENSG00000138071|P61160-2|ACTR2 4.37823756535848 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10578 57.248 146.0 931380.0 25 0 97258.0 + 5107 DIATIQEDQ 9 142 516.7464731944414 1031.4783934556826 2 516.7481567263603 MULTI CID FTMS 0 0 0 10572 688605.75 0.5284673328220868 -1 0.1057472229003906 6 Unmodified _DIATIQEDQ_ REV__ENSG00000151952|ENST00000422113|TMEM132D;REV__nc|ENSG00000151952|Q14C87-2|TMEM132D 23.1484247019978 0.2366544122328345 4 [TP]TT{I|L}SYSY 9 -1 [TP]TT{I|L}SY + + 20.261 20.927 2.7413 1.9643 1.9643 44.56 0.0 0.0 0.0 0.0 -5.427832463083444 -5.427832463083444 0.0 0 0.0 0.0 0.3807196863200844 0.0 [TP]TT{I|L}SYSY 1.9643 - 1315 + 1 1.54 105666.4 1.0 5909 4667 10572 HBL1_DMSO_200M_050219_2,10578 HBL1_DMSO_200M_050219_2,10578,DIATIQEDQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10579 57.249 63.0 716860.0 25 0 79151.0 + 38271 TPYNTPQL 8 87 467.2373662016786 932.4601794701572 2 467.2376281619072 MULTI CID FTMS 0 0 0 10572 686802.875 1.0 0 0.0 7 Unmodified _TPYNTPQL_ ENSG00000165219|ENST00000297933|GAPVD1;nc|ENSG00000165219|Q14C86-3|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;nc|ENSG00000165219|Q14C86-5|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1;nc|ENSG00000165219|Q14C86|GAPVD1 50.855029805455786 0.1352255786796883 4 D[K{I|L}]TNSQQ 8 7 + 37.343 0.0 0.0 4.0048 4.0048 72.266 0.0 0.0 0.0 20.889399919613965 1.9188552623891293 1.9188552623891293 4.744237387763093 0 0.3252574989159953 0.0 1.1237125054200234 0.0 D[K{I|L}]TNSQQ;D[K{I|L}]TSNQQ;D[K{I|L}]TGGSQQ;D[K{I|L}]TSGGQQ;{[QN]|[E{I|L}]|[KN]}[KS]NSQQ;{[QN]|[E{I|L}]|[KN]}[KS]SNQQ;{[QN]|[E{I|L}]|[KN]}PK[{M(Oxidation (M))|F}V][NS];D[Q{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}HH;D[K{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}HH;{[QN]|[E{I|L}]|[KN]}[KS]GGSQQ 4.0048;3.496;3.0115;2.5027;1.5172;1.0084;0.8955;0.86412;0.86412;0.52387 -;-;-;-;-;-;-;-;-;- 192 + 1 1.54 41234.9 1.0 5910 4667 10572 HBL1_DMSO_200M_050219_2,10579 HBL1_DMSO_200M_050219_2,10579,TPYNTPQL False True TPYNTPQL 57.24936 467.237628161907 5960838.5 10572.0 ENSG00000165219|ENST00000297933|GAPVD1;;nc|ENSG00000165219|Q14C86-3|GAPVD1;;nc|ENSG00000165219|Q14C86-5|GAPVD1;;nc|ENSG00000165219|Q14C86-4|GAPVD1;;nc|ENSG00000165219|Q14C86-6|GAPVD1;;nc|ENSG00000165219|Q14C86|GAPVD1 3.9830146630605054 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10580 57.253 176.0 359600.0 25 0 46238.0 -1 VLCMDCFQDS 10 97 637.7484083792172 0 637.7489501833916 PEAK CID FTMS 0 0 0 10572 383982.09375 1.0 0 0.0 8 2 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))MDC(Carbamidomethyl (C))FQDS_ ENSG00000159459|ENST00000290650|UBR1;nc|ENSG00000159459|Q8IWV7-2|UBR1 10.823927491677226 0.3685635357628707 4 S 1 -1 8.0989 0.0 0.0 0.63597 0.0 0.0 974.2969438562874 209.13030420474848 1183.427248061036 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 S 0.63597 + + 14 + 1 1.54 52651.0 1.0 5911 4667 10572 HBL1_DMSO_200M_050219_2,10580 HBL1_DMSO_200M_050219_2,10580,VLCMDCFQDS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10581 57.262 506.0 350880.0 25 0 26220.0 + 9960 FPGKHFQEI 9 159 551.7875691100098 1101.5605852868196 2 551.7878906130791 MULTI CID FTMS 0 0 0 10572 343319.625 0.0733076571908821 46 -4.550060272216797 9 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 46.0223103267499 0.0490911897871712 4 {[QN]|[E{I|L}]|[KN]}Q[VP]WA{M(Oxidation (M))|F}{I|L} 9 8 + 49.547 0.0 0.0 4.4979 4.4979 67.934 0.0 0.0 0.0 1.200229199238926 10.72559982972642 1.200229199238926 1.200229199238926 0 0.3252574989159953 0.8239087409443188 0.6694451763165201 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}Q[VP]WA{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NK[Y{I|L}]A{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}Q{[RE]|[WV]}PA{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PA{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP[PA]WA{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WK]{M(Oxidation (M))|F}GA{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}Q{[RE]|[WV]}AP{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AP{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[KS]{M(Oxidation (M))|F}GA{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[AG][VP]WA{M(Oxidation (M))|F}{I|L} 4.4979;4.3889;4.2402;4.19;4.062;4.0074;3.843;3.7928;3.6925;3.6619 -;-;-;-;-;-;-;-;-;- 2746 1 1.54 136938.9 1.0 5912 4667 10572 HBL1_DMSO_200M_050219_2,10581 HBL1_DMSO_200M_050219_2,10581,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10582 57.272 578.0 463800.0 25 0 43875.0 + 25342 NALKQLQV 8 210 457.2775324130976 912.5405118929953 2 457.2772399783134 MULTI CID FTMS 0 0 0 10572 322079.65625 1.0 0 0.0 10 Unmodified _NALKQLQV_ ENSG00000205531|ENST00000380542|NAP1L4;nc|ENSG00000205531|Q99733-2|NAP1L4 101.72198241140316 0.0888720693655427 4 {[QG]|[NA]}{I|L}AKG{I|L}QV 9 2 + 83.537 0.0 0.0 9.1544 9.1544 89.401 0.0 0.0 0.0 20.686353714179702 11.962724883926654 11.962724883926654 5.836134377877329 0 1.6989700043360187 2.0 0.0 1.6527120242278266 {[QG]|[NA]}{I|L}AKG{I|L}QV;{[QG]|[NA]}{I|L}AK{I|L}GQV;{[QG]|[NA]}{I|L}AKG{I|L}[AG]V;{[QG]|[NA]}{I|L}[KQ]{I|L}QV;{[QG]|[NA]}{I|L}AK{I|L}G[AG]V;GGA{I|L}AKG{I|L}QV;[AG]G{I|L}AKG{I|L}QV;NA{I|L}D[R{I|L}]{I|L}V;[Q{I|L}]GAKG{I|L}QV;{[QG]|[NA]}{I|L}[KQ]{I|L}[AG]V 9.1544;8.5148;8.1453;7.7415;7.5057;6.8875;6.8856;6.822;6.7864;6.7265 -;-;-;+;-;-;-;-;-;- + 3510 1 1.54 199730.5 1.0 5913 4667 10572 HBL1_DMSO_200M_050219_2,10582 HBL1_DMSO_200M_050219_2,10582,NALKQLQV True True NALKQLQV 57.271849 457.277239978313 2263876.75 10572.0 nc|ENSG00000205531|Q99733-2|NAP1L4;;ENSG00000205531|ENST00000380542|NAP1L4 5.903364976247151 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10583 57.274 116.0 1566300.0 25 0 325060.0 + 27636 PLGRLTGV 8 102 406.754850323561 811.495147713922 2 406.7545959353447 MULTI CID FTMS 0 0 0 10572 336722.34375 0.3511866919818236 -6 0.3708114624023437 11 Unmodified _PLGRLTGV_ REV__nc|ENSG00000157119|Q2TBA0-2|KLHL40 16.942295170755138 0.6606234159769251 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV 7 -1 + 67.769 0.0 0.0 8.3512 8.3512 94.708 0.0 0.0 0.0 12.752798775248776 12.752798775248776 12.752798775248776 12.752798775248776 0 1.7302046884880935 2.0 0.0 0.3054621874040891 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV;P{M(Oxidation (M))|F}KPPKV;[KP]{M(Oxidation (M))|F}PKPV;[KP]P{M(Oxidation (M))|F}KPV;{[HG]|PP}K{M(Oxidation (M))|F}KPV;[KP]PK{M(Oxidation (M))|F}PV;P{M(Oxidation (M))|F}KVK{[HG]|PP};{[HG]|PP}KK{M(Oxidation (M))|F}PV;[{I|L}T]KHSKV;[{I|L}P]GA{[TV]|[{I|L}S]}RV 8.3512;6.7797;4.8995;4.4949;4.1954;4.1885;3.9086;3.889;2.4458;1.9312 -;-;-;-;-;-;-;-;-;- 280 1 1.54 146033.4 1.0 5914 4667 10572 HBL1_DMSO_200M_050219_2,10583 HBL1_DMSO_200M_050219_2,10583,PLGRLTGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10584 57.286 686.0 167450.0 25 0 11409.0 -1 0 118 981.9142630086524 1961.8139730841044 2 982.4156371951104 MULTI CID FTMS 0 0 0 10572 280277.03125 0.7947418999393456 2 -0.1909332275390625 12 4 [QP]SVGV 6 -1 43.65 0.0 0.0 2.225 0.0 0.0 0.0 1391.489363058967 1391.489363058967 14.66621474099405 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 1.2302046884880935 0.2614393726401688 [QP]SVGV 2.225 - 1017 1 1.54 79184.3 1.0 5915 4667 10572 HBL1_DMSO_200M_050219_2,10584 HBL1_DMSO_200M_050219_2,10584, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10585 57.3 797.0 293360.0 25 0 55705.0 + 23496 LTIVPLQVDKV 11 175 408.9236295529408 1223.7490592590225 3 408.9229003787041 MULTI CID FTMS 0 0 0 10572 202796.671875 1.0 0 0.0 13 Unmodified _LTIVPLQVDKV_ REV__ENSG00000167104|ENST00000349552|BPIFB6 7.846045518447754 0.8381297814158264 4 [DP]G 3 -1 25.156 0.0 0.0 2.0557 0.0 0.0 0.0 951.623667983885 951.623667983885 7.453102516388277 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.1203715150305281 0.0 [DP]G 2.0557 - 197 1 1.54 183891.0 1.0 5916 4667 10572 HBL1_DMSO_200M_050219_2,10585 HBL1_DMSO_200M_050219_2,10585,LTIVPLQVDKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10586 57.312 647.0 236350.0 25 0 14126.0 + 13994 HYYQKALEL 9 177 582.8040940783374 0 582.8050414919853 PEAK CID FTMS 0 0 0 10572 218390.21875 1.0 0 0.0 14 Unmodified _HYYQKALEL_ ENSG00000119041|ENST00000263956|GTF3C3 70.33199760932243 0.0162606847128886 4 T{I|L}AKQYY 7 8 44.523 0.0 0.0 3.8263 0.0 0.0 159.0833359534127 134.0361727350219 293.1195086884346 0.0 0.0 0.0 0.0 0 1.5233623702246373 0.0 0.0 0.3494850021680094 T{I|L}AKQYY 3.8263 - 749 + 1 1.54 114752.1 1.0 5917 4667 10572 HBL1_DMSO_200M_050219_2,10586 HBL1_DMSO_200M_050219_2,10586,HYYQKALEL True True HYYQKALEL 57.312451 582.805041491985 3840955.75 10572.0 ENSG00000119041|ENST00000263956|GTF3C3 6.173312187194824 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10587 57.324 646.0 161890.0 25 0 17550.0 + 43977 YIDEEGVRYV 10 103 621.8038035769422 1241.5930542206845 2 621.8038207888603 MULTI CID FTMS 0 0 0 10572 192122.6875 1.0 0 0.0 15 Unmodified _YIDEEGVRYV_ ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-2|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 59.36838082759317 0.0382430275470746 4 Y{I|L}DEEGVRVY 10 2 + 96.526 0.0 0.0 7.7744 7.7744 78.645 0.0 0.0 0.0 36.53212513775344 5.314789170422557 5.314789170422557 0.5115252244738144 0 1.16944517631652 2.0 0.75 0.4247425010840047 Y{I|L}DEEGVRVY;Y{I|L}DEERRVY;Y{I|L}DEEGVRYV;Y{I|L}DEERRYV;Y{I|L}DEWVRVY;Y{I|L}DEER[VG]VY;Y{I|L}DEWVRYV;Y{I|L}DEEGV[VG]VY;Y{I|L}DEER[VG]YV;Y{I|L}DEEGV[VG]YV 7.7744;7.7332;7.3463;7.3051;7.2483;6.9916;6.8202;6.6942;6.5635;6.2661 -;-;+;-;-;-;-;-;-;- + 525 + 1 1.54 78735.9 1.0 5918 4667 10572 HBL1_DMSO_200M_050219_2,10587 HBL1_DMSO_200M_050219_2,10587,YIDEEGVRYV True True YIDEEGVRYV 57.323728 621.80382078886 1708857.125 10572.0 nc|ENSG00000136715|Q9H0E3-2|SAP130;;ENSG00000136715|ENST00000643581|SAP130;;nc|ENSG00000136715|Q9H0E3-3|SAP130;;nc|ENSG00000136715|Q9H0E3|SAP130 7.988214333852132 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10588 57.337 773.0 449380.0 25 0 95102.0 2437 AQSPVHVL 8 211 425.7425940007798 0 425.5002014040947 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _AQSPVHVL_ ENSG00000182732|ENST00000553525|RGS6;nc|ENSG00000182732|P49758-10|RGS6;nc|ENSG00000182732|P49758-11|RGS6;nc|ENSG00000182732|P49758-12|RGS6;nc|ENSG00000182732|P49758-13|RGS6;nc|ENSG00000182732|P49758-14|RGS6;nc|ENSG00000182732|P49758-15|RGS6;nc|ENSG00000182732|P49758-16|RGS6;nc|ENSG00000182732|P49758-2|RGS6;nc|ENSG00000182732|P49758-5|RGS6;nc|ENSG00000182732|P49758-6|RGS6;nc|ENSG00000182732|P49758-7|RGS6;nc|ENSG00000182732|P49758-8|RGS6;nc|ENSG00000182732|P49758-9|RGS6;nc|ENSG00000182732|P49758|RGS6 26.88365393820708 0.2878692218834006 4 M 1 8 8.8515 0.0 0.0 1.042 0.0 0.0 587.3383241326159 128.07210718326408 715.4104313158799 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 M 1.042 - 86 + 1 1.54 277808.5 1.0 5919 4667 10572 HBL1_DMSO_200M_050219_2,10588 HBL1_DMSO_200M_050219_2,10588,AQSPVHVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10589 57.35 699.0 144850.0 25 0 16803.0 + -1 LMYCVAEEFYE 11 125 735.3022030737726 1468.589853214345 2 735.3029052615166 MULTI CID FTMS 0 0 0 10572 157599.6875 0.8551802631899125 -1 0.1057472229003906 17 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))YC(Carbamidomethyl (C))VAEEFYE_ REV__ENSG00000177465|ENST00000326303|ACOT4 3.2813086475875832 0.8596665074481906 4 VYMDAS 6 -1 36.017 0.0 0.0 2.4525 0.0 0.0 320.1953962825076 479.10566126041255 799.3010575429201 0.0 0.0 0.0 0.0 0 0.0 0.0 1.089136830878453 0.0 VYMDAS 2.4525 - 179 + 1 1.54 87424.2 1.0 5920 4667 10572 HBL1_DMSO_200M_050219_2,10589 HBL1_DMSO_200M_050219_2,10589,LMYCVAEEFYE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10590 57.36 567.0 230690.0 25 0 12906.0 + 26670 NYIMQSHSL 9 170 546.7620727419853 0 546.7620727419853 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _NYIMQSHSL_ ENSG00000156502|ENST00000359655|SUPV3L1 34.40172386719151 0.0892392376003579 4 AQE{I|L}{I|L} 5 7 14.486 0.0 0.0 1.3272 0.0 0.0 260.09780163455804 274.08376345732114 534.1815650918792 0.0 0.0 0.0 0.0 0 1.1069758080123702 0.0 0.0 0.5 AQE{I|L}{I|L} 1.3272 - 237 + 1 1.54 106252.6 1.0 5921 4667 10572 HBL1_DMSO_200M_050219_2,10590 HBL1_DMSO_200M_050219_2,10590,NYIMQSHSL True True NYIMQSHSL 57.360366 546.762072741985 1119633.0 10572.0 ENSG00000156502|ENST00000359655|SUPV3L1 6.352284749348958 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10591 57.371 581.0 97737.0 25 0 5987.1 + 19902 LHSMMDSKLS 10 121 574.7764770388603 0 574.7764770388603 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _LHSMMDSKLS_ REV__ENSG00000100297|ENST00000216122|MCM5 7.289230182591677 0.3953776778296116 4 {I|L} 1 -1 7.302 0.0 0.0 0.63632 0.0 0.0 440.1380697248063 591.2911471002561 1031.4292168250624 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L} 0.63632 + + 52 + 1 1.54 47189.7 1.0 5922 4667 10572 HBL1_DMSO_200M_050219_2,10591 HBL1_DMSO_200M_050219_2,10591,LHSMMDSKLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10592 57.385 741.0 119360.0 25 0 13241.0 -1 0 55 1029.7488367919357 0 1030.084399402142 PEAK CID FTMS 0 0 0 10572 72311.4453125 0.8303648284768333 -1 0.1057472229003906 20 4 TMK 3 -1 17.945 0.0 0.0 0.8722 0.0 0.0 1251.1568399883652 443.1260385035056 1694.2828784918706 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 TMK 0.8722 - 105 + 1 1.54 69714.3 1.0 5923 4667 10572 HBL1_DMSO_200M_050219_2,10592 HBL1_DMSO_200M_050219_2,10592, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10594 57.389 1.3 54126000.0 25 0 10429000.0 + 44664 YPFKPPKV 8 72 325.86056900573425 974.5598776174028 3 325.8604308962822 MULTI CID FTMS 0 0 0 10593 39946636.0 0.6190672785519121 -7 0.5234107971191406 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 50.087 0.0 0.0 5.1394 5.1394 86.162 0.0 0.0 0.0 20.68881289407813 4.859856381998782 4.859856381998782 23.871768370101023 0 0.2742275032520141 1.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RRR{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T][KP]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[HG]|PP}KK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T]{[HG]|PP}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.1394;2.6899;1.3201;0.99814;0.91056;0.60167;0.42098 +;-;-;-;-;-;- + 240 + 1 1.507 62393.4 1.0 5924 4668 10593 HBL1_DMSO_200M_050219_2,10594 HBL1_DMSO_200M_050219_2,10594,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10595 57.39 2.8 13743000.0 25 0 2283400.0 + -1 MCFDAFSLNCM 11 41 685.7499676702942 1369.4853824073882 2 685.7516357302666 MULTI CID FTMS 0 0 0 10593 19158732.0 0.8149380372151878 1 -0.0383338928222656 2 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))FDAFSLNCM(Oxidation (M))_ REV__ENSG00000138039|ENST00000294954|LHCGR;REV__nc|ENSG00000138039|P22888-2|LHCGR 1.1933415558491238 0.8695176722560516 4 YMDAS 5 -1 32.206 0.0 0.0 2.3517 0.0 0.0 320.1544402398209 479.1072176568969 799.2616578967178 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YMDAS 2.3517 - 32 + 1 1.507 34675.0 1.0 5925 4668 10593 HBL1_DMSO_200M_050219_2,10595 HBL1_DMSO_200M_050219_2,10595,MCFDAFSLNCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10596 57.391 2.4 23944000.0 25 0 2372500.0 + 21218 LPDGRIIKV 9 66 505.8221480641613 1009.6297431951224 2 505.8223144412041 MULTI CID FTMS 0 0 0 10593 27687138.0 1.0 0 0.0 3 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 31.635753872319068 0.1286659907112723 4 {I|L}PD 3 6 45.177 0.0 0.0 4.4746 0.0 0.0 0.0 681.4433556912835 681.4433556912835 11.770540992022797 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}PD 4.4746 + + 97 + 1 1.507 51356.0 1.0 5926 4668 10593 HBL1_DMSO_200M_050219_2,10596 HBL1_DMSO_200M_050219_2,10596,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10597 57.392 8.6 5096200.0 25 0 543110.0 + 14437 IFQGNVHNF 9 80 538.2698057703245 1074.525058607449 2 538.2697021365166 MULTI CID FTMS 0 0 0 10593 5169323.5 0.8820860875113198 -1 0.1525993347167968 4 Unmodified _IFQGNVHNF_ ENSG00000060688|ENST00000263694|SNRNP40;ENST00000489853.1_1_1:31732921-31754364:-|nuORF;nc|ENSG00000060688|Q96DI7-2|SNRNP40 39.957323273325 0.0756908302845263 4 {I|L}{M(Oxidation (M))|F}Q[NG]VH{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 9 0 + 48.42 0.0 0.0 4.5062 4.5062 75.563 0.0 0.0 0.0 31.508556860707127 4.628618393527404 4.628618393527404 5.954387282529794 0 0.4247425010840047 1.154901959985743 0.4247425010840047 0.8252574989159953 + + {I|L}{M(Oxidation (M))|F}Q[NG]VH{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{I|L}{M(Oxidation (M))|F}Q[PA]QWW;{I|L}{M(Oxidation (M))|F}[RH]N{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{I|L}{M(Oxidation (M))|F}[AG][NG]VH{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{I|L}{M(Oxidation (M))|F}Q[PA]EE{[QN]|[E{I|L}]|[KN]};{I|L}{M(Oxidation (M))|F}[AG][PA]QWW;{I|L}{M(Oxidation (M))|F}[RH]GG{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{I|L}{M(Oxidation (M))|F}[RH][{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}Q[PA][AG]WW;{I|L}{M(Oxidation (M))|F}[RH]{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 4.5062;3.952;3.8783;3.6492;3.4604;3.09;3.0164;2.8656;2.7873;2.3422 +;-;-;-;-;-;-;-;-;- + 262 + 1 1.507 40396.3 1.0 5927 4668 10593 HBL1_DMSO_200M_050219_2,10597 HBL1_DMSO_200M_050219_2,10597,IFQGNVHNF True True IFQGNVHNF 57.392217 538.269702136517 41719128.0 10593.0 ENST00000489853.1_1_1:31732921-31754364:-|nuORF;;ENSG00000060688|ENST00000263694|SNRNP40;;nc|ENSG00000060688|Q96DI7-2|SNRNP40 6.904984951019287 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10598 57.393 33.0 1989300.0 25 0 447810.0 + 18276 KVIESFIKA 9 84 517.8151928274264 1033.6158327216526 2 517.8155395388603 MULTI CID FTMS 0 0 0 10593 2140521.75 0.7015217508861108 -1 0.1525993347167968 5 Unmodified _KVIESFIKA_ ENSG00000139687|ENST00000267163|RB1 43.9818466556824 0.0535980856389242 4 KV{I|L}E 4 5 45.895 0.0 0.0 4.4402 0.0 0.0 0.0 561.3058565729124 561.3058565729124 3.615305265358785 0.0 0.0 0.0 0 1.16944517631652 0.8538719643217619 0.0 0.0 + KV{I|L}E 4.4402 + + 242 + 1 1.507 57129.2 1.0 5928 4668 10593 HBL1_DMSO_200M_050219_2,10598 HBL1_DMSO_200M_050219_2,10598,KVIESFIKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10599 57.395 36.0 1511500.0 25 0 113250.0 + 26483 NTPEYMEKI 9 84 562.7682568165494 1123.5219606998987 2 562.7684814333916 MULTI CID FTMS 0 0 0 10593 1873267.125 0.8063912025923954 -1 0.1525993347167968 6 Unmodified _NTPEYMEKI_ ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2 28.49450938151212 0.1686335738423394 4 {[QS]|[NT]}PEYMEK{I|L} 9 0 + 60.249 0.0 0.0 5.3625 5.3625 88.341 0.0 0.0 0.0 20.566016034044445 7.324930384796815 7.324930384796815 57.639275466122015 0 0.4247425010840047 2.0 0.7742275032520141 0.0 + + {[QS]|[NT]}PEYMEK{I|L};AAP{[ES]|[DT]|[{I|L}C]}{[QV]|[N{I|L}]|[RA]|[KV]}E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[TP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QV]|[N{I|L}]|[RA]|[KV]}E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 5.3625;0.23229;0.11599 +;-;- + 165 + 1 1.507 47001.3 1.0 5929 4668 10593 HBL1_DMSO_200M_050219_2,10599 HBL1_DMSO_200M_050219_2,10599,NTPEYMEKI False True NTPEYMEKI 57.394575 562.768481433392 36395972.0 10593.0 ENSG00000196591|ENST00000519065|HDAC2;;nc|ENSG00000196591|Q92769-3|HDAC2 6.675363858540853 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10600 57.396 37.0 1781900.0 25 0 418940.0 -1 0 72 318.19664923749616 634.3787455417923 2 318.1965820193291 MULTI CID FTMS 0 0 0 10593 1867785.5 0.1567818672867033 -4 0.3316383361816406 7 4 S 1 -1 0.71334 0.0 0.0 0.11245 0.0 0.0 353.2147789593617 191.1080721490844 544.3228511084461 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.11245 - 2 + 1 1.507 60058.8 1.0 5930 4668 10593 HBL1_DMSO_200M_050219_2,10600 HBL1_DMSO_200M_050219_2,10600, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10601 57.397 51.0 892940.0 25 0 133680.0 3242 AYDRVEQEWVA 11 59 683.3238429764198 1364.6331330196394 2 683.3253661990166 MULTI CID FTMS 0 0 0 10593 1603900.25 0.6848425607445948 -2 0.2583465576171875 8 Unmodified _AYDRVEQEWVA_ ENSG00000157540|ENST00000647188|DYRK1A;nc|ENSG00000157540|Q13627-3|DYRK1A;nc|ENSG00000157540|Q13627-4|DYRK1A;nc|ENSG00000157540|Q13627-5|DYRK1A;nc|ENSG00000157540|Q13627|DYRK1A 6.2057823575117 0.8458686499021061 4 {[DA]|[EG]}YA 4 8 33.232 0.0 0.0 2.4352 0.0 0.0 0.0 941.4449365687208 941.4449365687208 6.778259348524358 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3054621874040891 0.0 {[DA]|[EG]}YA 2.4352 - 111 1 1.507 41776.7 1.0 5931 4668 10593 HBL1_DMSO_200M_050219_2,10601 HBL1_DMSO_200M_050219_2,10601,AYDRVEQEWVA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10602 57.398 36.0 1547500.0 25 0 155300.0 + 42619 VTTDIQVKV 9 102 501.7961868688668 1001.5778208045336 2 501.7954589724541 MULTI CID FTMS 0 0 0 10593 1424743.125 0.9268517099228012 -1 0.1525993347167968 9 Unmodified _VTTDIQVKV_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 63.960520009940105 0.0238892913700936 4 VTTD{I|L}QVKV 9 0 + 84.009 0.0 0.0 8.3876 8.3876 92.504 0.0 0.0 0.0 62.22534861453976 11.271211393095244 11.271211393095244 9.208187539523747 0 1.1307196863200843 2.0 0.0 0.4802046884880938 + + VTTD{I|L}QVKV;VTTD{I|L}[AG]VKV;VTTKK[{I|L}A]{[QN]|[E{I|L}]|[KN]};VTTKK{[ES]|[DT]|[{I|L}C]}[{I|L}P];V[WM]{I|L}QVKV;V[WM]{I|L}[AG]VKV 8.3876;7.4683;3.9111;3.5806;3.4236;2.4989 +;-;-;-;-;- + 511 + 1 1.507 45394.2 1.0 5932 4668 10593 HBL1_DMSO_200M_050219_2,10602 HBL1_DMSO_200M_050219_2,10602,VTTDIQVKV True True VTTDIQVKV 57.39829 501.795458972454 11037730.0 10593.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 6.849571069081624 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10603 57.399 31.0 1311700.0 25 0 147260.0 + 36511 TAFESIKSV 9 72 491.2670079263678 980.5194629195356 2 491.2661315798759 MULTI CID FTMS 0 0 0 10593 1403686.375 0.7221110855249133 -1 0.1525993347167968 10 Unmodified _TAFESIKSV_ chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1 31.26834338654808 0.1333407332142048 4 [TA]{M(Oxidation (M))|F}E{[TV]|[{I|L}S]}KSV 9 0 + 55.441 0.0 0.0 5.6542 5.6542 78.638 0.0 0.0 0.0 37.81690651227686 10.6032552655563 10.6032552655563 4.449237304209888 0 0.6549471895720985 2.0 0.6549471895720985 0.0 + + [TA]{M(Oxidation (M))|F}E{[TV]|[{I|L}S]}KSV;[TA]{M(Oxidation (M))|F}E[RK]MV;[TA]{M(Oxidation (M))|F}{[NV]|[RG]}{[TV]|[{I|L}S]}MV;[TA][Y{I|L}]{[NV]|[RG]}{M(Oxidation (M))|F}[PG];[{M(Oxidation (M))|F}T][RK]E{M(Oxidation (M))|F}[PG];[K{I|L}]SS[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[PG];[{M(Oxidation (M))|F}T]{[TV]|[{I|L}S]}{[NV]|[RG]}{M(Oxidation (M))|F}[PG] 5.6542;5.2005;4.075;2.7943;2.7549;1.6488;1.6294 +;-;-;-;-;-;- + 155 + 1 1.507 36504.4 1.0 5933 4668 10593 HBL1_DMSO_200M_050219_2,10603 HBL1_DMSO_200M_050219_2,10603,TAFESIKSV False True TAFESIKSV 57.399469 491.266131579876 26689866.0 10593.0 ENSG00000153201|ENST00000283195|RANBP2;;ENSG00000153165|ENST00000409886|RGPD3;;nc|ENSG00000183054|Q99666-2|RGPD5;;ENSG00000169629|ENST00000302558|RGPD8;;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;;ENSG00000015568|ENST00000016946|RGPD5;;ENSG00000185304|ENST00000398146|RGPD2;;ENSG00000187627|ENST00000641458|RGPD1;;ENSG00000183054|ENST00000329516|RGPD6;;ENSG00000196862|ENST00000408999|RGPD4;;nc|ENSG00000187627|P0DJD0|RGPD1 6.68315060933431 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10604 57.401 20.0 2068200.0 25 0 151290.0 + -1 MLFSSVSKQ 9 75 521.7652436197269 1041.5159343062537 2 521.7654296755791 MULTI CID FTMS 0 0 0 10593 1246508.75 1.0 0 0.0 11 Oxidation (M) _M(Oxidation (M))LFSSVSKQ_ REV__ENSG00000127318|ENST00000538666|IL22 12.531546534597751 0.4974689918368763 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{M(Oxidation (M))|F}V]TVW{M(Oxidation (M))|F} 8 -1 + 36.151 0.0 0.0 3.471 3.471 73.982 0.0 0.0 0.0 22.656169928226007 8.839256468719157 8.839256468719157 7.7815125038364386 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{M(Oxidation (M))|F}V]TVW{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{M(Oxidation (M))|F}V]VTW{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L};[HV]DVT[{M(Oxidation (M))|F}V][EP];[HV]DTV[{M(Oxidation (M))|F}V][EP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YK][{M(Oxidation (M))|F}V][EP] 3.471;2.7239;1.9597;1.3038;0.55663;0.20665 -;-;-;-;-;- 169 + 1 1.507 38635.5 1.0 5934 4668 10593 HBL1_DMSO_200M_050219_2,10604 HBL1_DMSO_200M_050219_2,10604,MLFSSVSKQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10605 57.403 84.0 864140.0 25 0 90127.0 + 45051 YPYEYEGGHI 10 64 614.269633838741 1226.524714744282 2 614.2701293826103 MULTI CID FTMS 0 0 0 10593 1186400.375 0.1918555648567095 2 -0.0841560363769531 12 Unmodified _YPYEYEGGHI_ ENSG00000101224|ENST00000245960|CDC25B;ENSG00000164045|ENST00000302506|CDC25A;nc|ENSG00000101224|P30305-2|CDC25B;nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B;nc|ENSG00000164045|P30304-2|CDC25A 81.61307344734483 0.0157458389277943 4 YPYEYEGG[H{I|L}] 10 0 + 97.414 0.0 0.0 7.9423 7.9423 84.779 0.0 0.0 0.0 51.7086398353873 4.884381005764311 4.884381005764311 3.521825181113627 0 1.305462187404089 2.0 1.0994850021680094 0.0 + + YPYEYEGG[H{I|L}];YPYEYEN[H{I|L}];YPY[HN]YE{[QN]|[E{I|L}]|[KN]};YPYE{[RE]|[WV]}E{[QN]|[E{I|L}]|[KN]};YPY[HN]EY{[QN]|[E{I|L}]|[KN]};YPYE{I|L}[WD]{[QN]|[E{I|L}]|[KN]};YP{I|L}[WD]EY{[QN]|[E{I|L}]|[KN]};Y{I|L}{M(Oxidation (M))|F}EYEGG[H{I|L}];Y{I|L}{M(Oxidation (M))|F}EYEN[H{I|L}];YP{I|L}[WD]YE{[QN]|[E{I|L}]|[KN]} 7.9423;7.6552;5.8842;5.8842;5.7151;5.7037;5.596;5.5556;5.2685;5.047 +;-;-;-;-;-;-;-;-;- + 1154 + 1 1.507 61013.1 1.0 5935 4668 10593 HBL1_DMSO_200M_050219_2,10605 HBL1_DMSO_200M_050219_2,10605,YPYEYEGGHI True True YPYEYEGGHI 57.402557 614.27012938261 108225080.0 10593.0 nc|ENSG00000101224|P30305-2|CDC25B;;nc|ENSG00000101224|P30305-4|CDC25B;;ENSG00000101224|ENST00000245960|CDC25B;;ENSG00000164045|ENST00000302506|CDC25A;;nc|ENSG00000101224|P30305-3|CDC25B;;nc|ENSG00000164045|P30304-2|CDC25A 8.698064168294271 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10606 57.404 61.0 1226600.0 25 0 60891.0 + 41670 VPQSHMPEI 9 102 519.2573958520906 1036.500238770981 2 519.2575561404228 MULTI CID FTMS 0 0 0 10593 1032466.5625 0.9363084989298418 -1 0.1525993347167968 13 Unmodified _VPQSHMPEI_ ENSG00000196712|ENST00000358273|NF1;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-2|NF1;nc|ENSG00000196712|P21359-3|NF1;nc|ENSG00000196712|P21359-4|NF1;nc|ENSG00000196712|P21359-5|NF1;nc|ENSG00000196712|P21359-6|NF1;NF1|p.H1962Pfs*2|1|0.23|ENSG00000196712|chr17:31334908-31334909|-/C|frameshift_variant 61.60191391372663 0.0251951588191061 4 VPQSHMPE{I|L} 9 0 + 67.893 0.0 0.0 6.5503 6.5503 87.783 0.0 0.0 0.0 32.02979868148695 14.09256854528806 14.09256854528806 9.208187539523747 0 1.174742501084005 1.2218487496163564 0.6549471895720984 0.0 + + VPQSHMPE{I|L};VP[AG]SHMPE{I|L};VPQSHM{I|L}[EP];VP[AG]SHM{I|L}[EP];VPQSH[EP]M{I|L};[PS]QVHMPE{I|L};[TP]NHMVPE{I|L};[EP]EQ[WH]V{I|L};VP[AG]SH[EP]M{I|L};[QP]SHMVPE{I|L} 6.5503;5.6619;4.937;4.0486;3.8614;3.1263;3.112;3.0491;2.973;2.5726 +;-;-;-;-;-;-;-;-;- + 725 + 1 1.507 63784.4 1.0 5936 4668 10593 HBL1_DMSO_200M_050219_2,10606 HBL1_DMSO_200M_050219_2,10606,VPQSHMPEI True True VPQSHMPEI 57.404077 519.257556140423 36467336.0 10593.0 ENSG00000196712|ENST00000358273|NF1;;nc|ENSG00000196712|P21359-3|NF1;;nc|ENSG00000196712|P21359-4|NF1;;NF1|p.H1962Pfs*2|1|0.23|ENSG00000196712|chr17:31334908-31334909|-/C|frameshift_variant;;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;;nc|ENSG00000196712|P21359-6|NF1;;nc|ENSG00000196712|P21359-5|NF1;;nc|ENSG00000196712|P21359-2|NF1 4.070326725641887 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10607 57.405 54.0 632390.0 25 0 45834.0 + 4018 DALRSGLTV 9 71 466.2639604463565 930.5133679595132 2 466.2640563845634 MULTI CID FTMS 0 0 0 10593 704316.4375 0.0035759692468135 14 -1.2383308410644531 14 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 26.268140514670165 0.1969607489560049 4 {[DA]|[EG]}[R{I|L}][SG]{I|L}TV 9 0 + 38.139 0.0 0.0 4.0987 4.0987 71.14 0.0 0.0 0.0 3.601514477826377 8.688259181417955 3.601514477826377 3.601514477826377 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}[R{I|L}][SG]{I|L}TV;{[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[SA]|[TG]}[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[DA]|[EG]}[R{I|L}][KT]EV;{[DA]|[EG]}[R{I|L}]C[RV]V;{[SA]|[TG]}{[ES]|[DT]|[{I|L}C]}[KP]{I|L}TV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[QP]V;{[VA]|[{I|L}G]}[TA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[VA]|[{I|L}G]}{[RE]|[WV]}[SG]{I|L}TV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[NP]{I|L} 4.0987;3.7116;3.1091;2.8651;2.5416;2.4621;2.3518;2.1386;1.4915;1.3567 +;-;-;-;-;-;-;-;-;- + 134 1 1.507 32248.7 1.0 5937 4668 10593 HBL1_DMSO_200M_050219_2,10607 HBL1_DMSO_200M_050219_2,10607,DALRSGLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10608 57.41 146.0 1656200.0 25 0 464930.0 -1 0 56 1199.829803183594 0 1199.830371081829 PEAK CID FTMS 0 0 0 10593 641059.625 0.4741831387911655 1 -0.0383338928222656 15 4 E 1 -1 6.9897 0.0 0.0 0.29152 0.0 0.0 1741.4157275987047 524.164297112521 2265.5800247112256 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.29152 - 25 + 1 1.507 197300.8 1.0 5938 4668 10593 HBL1_DMSO_200M_050219_2,10608 HBL1_DMSO_200M_050219_2,10608, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10609 57.412 119.0 389550.0 25 0 48136.0 + 12233 GQVPPLQSV 9 88 462.7611985671394 923.5078442010788 2 462.7612487673759 MULTI CID FTMS 0 0 0 10593 598541.75 0.3827253901880147 5 -0.2794647216796875 16 Unmodified _GQVPPLQSV_ ENSG00000106351|ENST00000300176|AGFG2 29.081581746732265 0.1611639662936252 4 {[QG]|[NA]}VP 4 5 32.818 0.0 0.0 3.5536 0.0 0.0 0.0 539.2817754357069 539.2817754357069 11.603200647075028 0.0 0.0 0.0 0 0.8807196863200843 0.6575773191777937 0.0 0.4247425010840047 + {[QG]|[NA]}VP 3.5536 + + 184 1 1.507 41303.9 1.0 5939 4668 10593 HBL1_DMSO_200M_050219_2,10609 HBL1_DMSO_200M_050219_2,10609,GQVPPLQSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10610 57.415 132.0 475800.0 25 0 51265.0 + 36569 TALKIMKV 8 90 301.86160933573194 902.562998607396 3 301.8613159060478 MULTI CID FTMS 0 0 0 10593 491803.96875 0.0495662702892014 5 -0.2794647216796875 17 Unmodified _TALKIMKV_ ENSG00000108788|ENST00000435881|MLX;ENST00000588320.1_1_17:40720799-40723580:+|nuORF;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 22.736283301280096 0.5659792798204337 4 TA{I|L}K{I|L}MKV 8 0 + 54.256 0.0 0.0 6.0114 6.0114 74.709 0.0 0.0 0.0 31.612365838923605 1.497623203333319 1.497623203333319 1.497623203333319 0 0.1435078169319297 1.6989700043360187 0.0 0.0 + + TA{I|L}K{I|L}MKV;TA{I|L}K{I|L}MVK 6.0114;5.8454 +;- + 115 + 1 1.507 56155.0 1.0 5940 4668 10593 HBL1_DMSO_200M_050219_2,10610 HBL1_DMSO_200M_050219_2,10610,TALKIMKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10611 57.418 132.0 567250.0 25 0 76036.0 + 43271 WGRLWWHRWLR 11 65 826.4459519991036 1650.8773510650071 2 826.4484741091728 MULTI CID FTMS 0 0 0 10593 465351.03125 0.5606914632172801 -2 0.2583465576171875 18 Unmodified _WGRLWWHRWLR_ REV__ENST00000473038.5_1_1:46033610-46035625:+|nuORF 0.0 0.8751479354844584 4 [{I|L}P][PG]AMAAV 9 -1 38.338 0.0 0.0 2.3223 0.0 0.0 0.0 840.4205035055279 840.4205035055279 19.4099998328936 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P][PG]AMAAV 2.3223 - 412 1 1.507 57457.1 1.0 5941 4668 10593 HBL1_DMSO_200M_050219_2,10611 HBL1_DMSO_200M_050219_2,10611,WGRLWWHRWLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10612 57.42 116.0 341040.0 25 0 58300.0 + 23013 LSIAEWTAV 9 68 495.266998553184 988.519444173168 2 495.2675353884697 MULTI CID FTMS 0 0 0 10593 471042.5 0.0957118167928197 4 -0.1993789672851562 19 Unmodified _LSIAEWTAV_ REV__ENSG00000183549|ENST00000331849|ACSM5;REV__nc|ENSG00000183549|Q6NUN0-2|ACSM5 16.942295170755138 0.3780752226737986 4 {[TV]|[{I|L}S]}{[RE]|[WV]}G{[TV]|[{I|L}S]}EV 9 -1 + 36.092 0.0 0.0 3.6512 3.6512 78.971 0.0 0.0 0.0 13.239087409443194 10.634862575211066 10.634862575211066 13.239087409443194 0 0.5 2.0 0.0 0.0 {[TV]|[{I|L}S]}{[RE]|[WV]}G{[TV]|[{I|L}S]}EV;{NN|[MP]|[D{I|L}]|[EV]}[WK]{[TV]|[{I|L}S]}EV 3.6512;2.3119 -;- 90 1 1.507 35100.6 1.0 5942 4668 10593 HBL1_DMSO_200M_050219_2,10612 HBL1_DMSO_200M_050219_2,10612,LSIAEWTAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10613 57.423 142.0 256070.0 25 0 58128.0 -1 0 37 1026.4272588859894 3076.2599472581687 3 1026.762744128704 MULTI CID FTMS 0 0 0 10593 441578.3125 0.5947988241841845 -2 0.2583465576171875 20 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.507 41001.0 1.0 5943 4668 10593 HBL1_DMSO_200M_050219_2,10613 HBL1_DMSO_200M_050219_2,10613, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10615 57.427 0.49 56429000.0 25 0 9695200.0 + 21221 LPDGRIIKV 9 61 337.55035122418985 1009.6292242727696 3 337.5501586794853 MULTI CID FTMS 0 0 0 10614 60239412.0 0.9095904199987184 1 -0.0458221435546875 1 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 10.898955630103616 0.5416613042237204 4 {I|L}V 2 7 20.969 0.0 0.0 2.0769 0.0 0.0 0.0 794.4531604054639 794.4531604054639 9.54242509439325 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 2.0769 - 28 + 1 1.507 28699.6 1.0 5944 4669 10614 HBL1_DMSO_200M_050219_2,10615 HBL1_DMSO_200M_050219_2,10615,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10616 57.428 1.5 23816000.0 25 0 2536900.0 + 44675 YPFKPPKV 8 55 488.2868778785377 974.5592028238756 2 488.2869140505791 MULTI CID FTMS 0 0 0 10614 22750184.0 0.7481767327139686 -6 0.3879661560058594 2 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 23.1484247019978 0.5573009939494978 4 YP{M(Oxidation (M))|F}KP 5 3 56.186 0.0 0.0 5.7652 0.0 0.0 0.0 339.2050875299438 339.2050875299438 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YP{M(Oxidation (M))|F}KP 5.7652 + + 20 + 1 1.507 34497.6 1.0 5945 4669 10614 HBL1_DMSO_200M_050219_2,10616 HBL1_DMSO_200M_050219_2,10616,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10617 57.429 10.0 2542300.0 25 0 196150.0 + 44736 YPKEKTYI 8 60 521.2839223147159 1040.5532916962318 2 521.2845336794853 MULTI CID FTMS 0 0 0 10614 1492995.5 0.7663288068640273 -1 0.0383338928222656 3 Unmodified _YPKEKTYI_ REV__ENSG00000198039|ENST00000476120|ZNF273;REV__nc|ENSG00000198039|Q14593-2|ZNF273 7.910154910731844 0.7763180056447161 4 Y{I|L} 2 -1 14.83 0.0 0.0 1.4252 0.0 0.0 746.3944609850975 0.0 746.3944609850975 0.0 2.839966563652005 0.0 0.0 0 0.5 0.0 0.0 0.0 Y{I|L} 1.4252 + + 25 + 1 1.507 28004.3 1.0 5946 4669 10614 HBL1_DMSO_200M_050219_2,10617 HBL1_DMSO_200M_050219_2,10617,YPKEKTYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10618 57.431 66.0 1137100.0 25 0 53185.0 + 22771 LQQGGAECSY 10 84 528.2268002941441 1054.4390476550882 2 528.2270385622978 MULTI CID FTMS 0 0 0 10614 696614.25 0.3158761592176443 -3 0.2966804504394531 4 Unmodified _LQQGGAECSY_ REV__ENSG00000154358|ENST00000680850|OBSCN;REV__ENSG00000154358|ENST00000680850|OBSCN;REV__nc|ENSG00000154358|Q5VST9-2|OBSCN;REV__nc|ENSG00000154358|Q5VST9-3|OBSCN;REV__nc|ENSG00000154358|Q5VST9-5|OBSCN;REV__nc|ENSG00000154358|Q5VST9-6|OBSCN;REV__nc|ENSG00000154358|Q5VST9|OBSCN 17.11289562659939 0.5604042439455784 4 YHT{I|L} 4 -1 27.211 0.0 0.0 2.5806 0.0 0.0 522.1839466779312 0.0 522.1839466779312 0.0 12.518572025801546 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 YHT{I|L} 2.5806 - 208 1 1.507 62775.7 1.0 5947 4669 10614 HBL1_DMSO_200M_050219_2,10618 HBL1_DMSO_200M_050219_2,10618,LQQGGAECSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10619 57.435 217.0 629450.0 25 0 71034.0 + 26815 PAPPPPPVL 9 125 442.7662434121444 883.5179338910888 2 442.7657958865166 MULTI CID FTMS 0 0 0 10614 665251.3125 1.0 0 0.0 5 Unmodified _PAPPPPPVL_ ENSG00000114790|ENST00000465093|ARHGEF26;nc|ENSG00000114790|Q96DR7-3|ARHGEF26;nc|ENSG00000114790|Q96DR7-4|ARHGEF26 45.7499826716795 0.0496882803020414 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KPPPV{I|L} 8 3 + 50.888 0.0 0.0 5.7597 5.7597 80.638 0.0 0.0 0.0 5.830604225143013 11.483259264971151 5.830604225143013 5.830604225143013 0 0.7856668758921829 1.2218487496163564 0.0 0.2396518287104437 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KPPPV{I|L};[PA]PPPPPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KP[RH]{I|L};[YK]APPPV{I|L};{[HG]|PP}APPPPV{I|L};[PA][YK]PPV{I|L};{[HG]|PP}PAPPPV{I|L};[YK]PAPPV{I|L};[VP]PPPP[PA]{I|L};{[HG]|PP}PPAPPV{I|L} 5.7597;5.0998;4.944;4.0878;3.4519;3.4446;3.3284;2.839;2.1522;2.0795 -;+;-;-;-;-;-;-;-;- + 510 1 1.507 108746.8 1.0 5948 4669 10614 HBL1_DMSO_200M_050219_2,10619 HBL1_DMSO_200M_050219_2,10619,PAPPPPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10620 57.439 202.0 729310.0 25 0 79300.0 + 8232 EPYPEVSRI 9 147 545.2824479364269 1088.5503429396538 2 545.2840453982353 MULTI CID FTMS 0 0 0 10614 659726.875 0.3122000189763692 -10 0.7598228454589844 6 Unmodified _EPYPEVSRI_ ENSG00000165643|ENST00000425225|SOHLH1;nc|ENSG00000165643|Q5JUK2|SOHLH1 39.21299971606389 0.0797768173001226 4 [EP]YPEVSR{I|L} 9 0 + 69.178 0.0 0.0 6.3551 6.3551 74.3 0.0 0.0 0.0 22.37643016799588 0.5129698714372068 0.5129698714372068 0.5129698714372068 0 0.8494850021680094 1.5228787452803376 0.7742275032520141 0.3054621874040891 + + [EP]YPEVSR{I|L};[EP]YPEV{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[EP]YPEVRTV;[EP]YPEVRS{I|L};[EP]YP{I|L}DSR{I|L};[EP]YP{I|L}D{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[EP]YP{I|L}DRTV;[EP]YPE{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]};[EP]YP{I|L}DRS{I|L};[EP]Y{I|L}PDSR{I|L} 6.3551;6.308;6.0982;5.8883;5.7195;5.6724;5.4625;5.3893;5.2527;5.1219 +;-;-;-;-;-;-;-;-;- + 1913 + 1 1.507 116664.1 1.0 5949 4669 10614 HBL1_DMSO_200M_050219_2,10620 HBL1_DMSO_200M_050219_2,10620,EPYPEVSRI True True EPYPEVSRI 57.438938 545.284045398235 277899620.0 10614.0 ENSG00000165643|ENST00000425225|SOHLH1;;nc|ENSG00000165643|Q5JUK2|SOHLH1 5.863603274027507 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10621 57.443 236.0 597110.0 25 0 97861.0 + 20209 LLASCGCV 8 138 383.1854876102344 764.3564222872687 2 383.1858398318291 MULTI CID FTMS 0 0 0 10614 561194.5625 0.5277024117912353 2 -0.083709716796875 7 Unmodified _LLASCGCV_ REV__ENSG00000151062|ENST00000382722|CACNA2D4;REV__nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4;REV__nc|ENSG00000151062|Q7Z3S7-5|CACNA2D4 15.768221252438446 0.6779680726941459 4 [{I|L}A]G 3 -1 27.447 0.0 0.0 3.5909 0.0 0.0 0.0 520.1903053041234 520.1903053041234 15.228787452803374 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]G 3.5909 - 90 1 1.507 111572.4 1.0 5950 4669 10614 HBL1_DMSO_200M_050219_2,10621 HBL1_DMSO_200M_050219_2,10621,LLASCGCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10622 57.445 64.0 1252200.0 25 0 142300.0 + 21583 LPKNPDLRI 9 74 355.8855644675957 1064.6348640029871 3 356.2198364138603 MULTI CID FTMS 0 0 0 10614 581286.3125 0.3735726099855585 -4 0.3437919616699219 8 Unmodified _LPKNPDLRI_ ENSG00000163636|ENST00000295901|PSMD6;ENST00000475036.1_1_3:64008918-64009122:-|nuORF;nc|ENSG00000163636|Q15008-4|PSMD6 18.373094154950223 0.3393451798331396 4 {I|L}PKNPD{I|L}[R{I|L}] 9 0 + 55.512 0.0 0.0 5.2142 5.2142 79.633 0.0 0.0 0.0 42.55449080957064 4.762036441594191 4.762036441594191 6.989700043360188 0 0.1421590589602531 0.0 0.0 0.4247425010840047 + + {I|L}PKNPD{I|L}[R{I|L}];{I|L}PKNDP{I|L}[R{I|L}];{I|L}PKGGPD{I|L}[R{I|L}];{I|L}PKGGDP{I|L}[R{I|L}];{I|L}PKN{I|L}[DP][R{I|L}];{I|L}PK{I|L}N[DP][R{I|L}];{I|L}PK{I|L}YY[R{I|L}];{I|L}PKYY{I|L}[R{I|L}];{I|L}PKGG{I|L}[DP][R{I|L}];{I|L}PK{I|L}GG[DP][R{I|L}] 5.2142;4.5577;4.3493;3.6927;3.453;3.1702;3.1272;3.1272;2.588;2.3053 +;-;-;-;-;-;-;-;-;- + 243 + 1 1.507 73311.2 1.0 5951 4669 10614 HBL1_DMSO_200M_050219_2,10622 HBL1_DMSO_200M_050219_2,10622,LPKNPDLRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10623 57.45 250.0 692440.0 25 0 60114.0 + 22182 LPQEFRERI 9 128 396.55598360911074 1186.6461214275323 3 396.5554077029228 MULTI CID FTMS 0 0 0 10614 482223.1875 0.4319421514669551 -4 0.3437919616699219 9 Unmodified _LPQEFRERI_ ENSG00000080839|ENST00000373664|RBL1;nc|ENSG00000080839|P28749-2|RBL1 26.020703789607367 0.2001090068861241 4 {I|L}PQE{I|L}GV{[RE]|[WV]}{M(Oxidation (M))|F} 10 4 + 61.665 0.0 0.0 5.1966 5.1966 79.159 0.0 0.0 0.0 39.01609184245992 1.249387366082999 1.249387366082999 6.53212513775344 0 0.0 1.154901959985743 0.0 1.5044321917401078 {I|L}PQE{I|L}GV{[RE]|[WV]}{M(Oxidation (M))|F};{I|L}PQE{I|L}R{[RE]|[WV]}{M(Oxidation (M))|F};{I|L}P[AG]E{I|L}GV{[RE]|[WV]}{M(Oxidation (M))|F};{I|L}PQE{I|L}[W{M(Oxidation (M))|F}][RV];{I|L}PQE{I|L}[{I|L}P][KC]{M(Oxidation (M))|F};{I|L}P[AG]E{I|L}R{[RE]|[WV]}{M(Oxidation (M))|F};{I|L}PQG{I|L}EV{[RE]|[WV]}{M(Oxidation (M))|F};{I|L}P{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}KPK[VP];{I|L}P{I|L}{[QG]|[NA]}EV{[RE]|[WV]}{M(Oxidation (M))|F};{I|L}P{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GV{[RE]|[WV]}{M(Oxidation (M))|F} 5.1966;4.6461;4.4243;4.4028;4.2055;3.8701;3.7841;3.7649;3.724;3.6832 -;-;-;-;-;-;-;-;-;- 824 + 1 1.507 140542.7 1.0 5952 4669 10614 HBL1_DMSO_200M_050219_2,10623 HBL1_DMSO_200M_050219_2,10623,LPQEFRERI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10624 57.454 250.0 973610.0 25 0 81729.0 + 42885 VVPAALKV 8 154 398.76834549404936 795.5221380548987 2 398.7680541872978 MULTI CID FTMS 0 0 0 10614 493945.375 0.4313048195348553 -3 0.2966804504394531 10 Unmodified _VVPAALKV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 38.15118350030904 0.2652218139009398 4 VVPAA{I|L}VK 8 2 + 53.885 0.0 0.0 6.7736 6.7736 77.774 0.0 0.0 0.0 26.989700043360187 1.5482466278869893 1.5482466278869893 1.5482466278869893 0 0.3807196863200844 2.0 0.0 0.8296896906561032 VVPAA{I|L}VK;VVPAA{I|L}KV;[{I|L}P][VG]A{I|L}VK;[{I|L}P][VG]A{I|L}KV 6.7736;6.579;1.636;1.4414 -;+;-;- + 210 + 1 1.507 195330.2 1.0 5953 4669 10614 HBL1_DMSO_200M_050219_2,10624 HBL1_DMSO_200M_050219_2,10624,VVPAALKV False True VVPAALKV 57.454206 398.768054187298 6774251.0 10614.0 ENST00000468655.1_1_19:49994004-49994437:+|nuORF;;nc|ENSG00000293056|Q6NVV1|RPL13AP3;;ENSG00000142541|ENST00000391857|RPL13A 5.345263957977295 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10625 57.459 272.0 492560.0 25 0 44191.0 + 9991 FPIQVMKIN 9 156 363.8745715571168 1088.6018852715504 3 363.8746215701103 MULTI CID FTMS 0 0 0 10614 373033.5625 0.4088286298411061 -6 0.3879661560058594 11 Unmodified _FPIQVMKIN_ REV__ENSG00000064933|ENST00000441310|PMS1;REV__nc|ENSG00000064933|P54277-3|PMS1 7.910154910731844 0.6385446671287552 4 GGYP[KP]{M(Oxidation (M))|F}PKV 10 -1 + 29.358 0.0 0.0 2.6969 2.6969 65.352 0.0 0.0 0.0 17.085521743960328 0.4178851384268967 0.4178851384268967 2.518119729937993 0 0.2742275032520141 1.3010299956639813 0.0 0.1421590589602531 GGYP[KP]{M(Oxidation (M))|F}PKV;GGYP[KP]{M(Oxidation (M))|F}PVK;GGYP[KP]{[ET]|[MV]}K{I|L};GGYP[KP]{[ET]|[MV]}{I|L}K;[YG]GP[KP]{M(Oxidation (M))|F}PKV;[YG]GP[KP]{M(Oxidation (M))|F}PVK;[YG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KGPPKV;[YG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KGPPVK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{I|L}KKAG{[DS]|[MA]|[CV]|TT};GGG{[TV]|[{I|L}S]}{I|L}KKAG{[DS]|[MA]|[CV]|TT} 2.6969;2.4655;1.614;1.483;1.2498;1.0185;0.89647;0.66516;0.43912;0.22564 -;-;-;-;-;-;-;-;-;- 697 + 1 1.507 114226.0 1.0 5954 4669 10614 HBL1_DMSO_200M_050219_2,10625 HBL1_DMSO_200M_050219_2,10625,FPIQVMKIN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10626 57.464 249.0 287200.0 25 0 28732.0 -1 MIFIFLFLTY 10 79 662.3575618730723 1322.7005708129443 2 662.3567382693291 MULTI CID FTMS 0 0 0 10614 382252.34375 1.0 0 0.0 12 Oxidation (M) _M(Oxidation (M))IFIFLFLTY_ ENSG00000179626|ENST00000641569|OR6C4 7.910154910731844 0.6900473968920092 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}D 4 -1 27.167 0.0 0.0 2.0539 0.0 0.0 0.0 797.4675745573383 797.4675745573383 4.593924877592315 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}D 2.0539 - 98 1 1.507 55816.9 1.0 5955 4669 10614 HBL1_DMSO_200M_050219_2,10626 HBL1_DMSO_200M_050219_2,10626,MIFIFLFLTY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10627 57.469 267.0 359190.0 25 0 49876.0 + 44501 YPASTVQI 8 116 439.73499508234266 877.4554372314853 2 439.7343932986259 MULTI CID FTMS 0 0 0 10614 322380.25 0.9878767774980732 -3 0.2966804504394531 13 Unmodified _YPASTVQI_ ENSG00000101361|ENST00000329276|NOP56;ENST00000480992.5_1_20:2635438-2636687:+|nuORF;ENST00000484998.5_1_20:2635830-2636687:+|nuORF 36.46614268402704 0.2934124525509074 4 [AG]{I|L}DYVQ{I|L} 8 5 + 33.611 0.0 0.0 3.8305 3.8305 69.846 0.0 0.0 0.0 3.3725054575099733 7.786596949921218 3.3725054575099733 3.3725054575099733 0 0.3182503180159344 1.3979400086720375 1.079689690656103 0.0 [AG]{I|L}DYVQ{I|L};{[QN]|[E{I|L}]|[KN]}NYVQ{I|L};[PA]STYVQ{I|L};[AG]VEYVQ{I|L};[Q{I|L}]DYVQ{I|L};[PA]TSYVQ{I|L};[AG]{I|L}VDYQ{I|L};[AG]{I|L}DVYQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{[MG]|[TS]}VQ{I|L} 3.8305;3.4461;3.0954;2.9436;2.8471;2.6799;2.6261;2.605;2.5571;2.491 -;-;-;-;-;-;-;-;-;+ + 360 1 1.507 78731.6 1.0 5956 4669 10614 HBL1_DMSO_200M_050219_2,10627 HBL1_DMSO_200M_050219_2,10627,YPASTVQI False True YPASTVQI 57.4688 439.734393298626 5361082.5 10614.0 ENST00000480992.5_1_20:2635438-2636687:+|nuORF;;ENST00000484998.5_1_20:2635830-2636687:+|nuORF;;ENSG00000101361|ENST00000329276|NOP56 0.6022092600663503 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10629 57.476 200.0 456530.0 25 0 39507.0 + 30526 RIPDGVVSV 9 121 471.2741404130709 940.533727892942 2 471.2741882205009 MULTI CID FTMS 0 0 0 10628 221511.484375 0.4982424649127351 3 -0.1953086853027343 1 Unmodified _RELAPAVSV_ nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1 19.256988751693697 0.3154191944385105 4 AAPE{I|L}GVVSV 10 6 AAPE{I|L}GVV + + 21.594 9.7929 1.3298 2.2959 2.2959 44.852 0.0 0.0 0.0 0.0 1.6625962568686603 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 AAPE{I|L}GVVSV 2.2959 - 607 + 1 1.467 72051.1 1.0 5957 4670 10628 HBL1_DMSO_200M_050219_2,10629 HBL1_DMSO_200M_050219_2,10629,RELAPAVSV False False RIPDGVVSV 57.475742 471.274188220501 7010848.5 10628.0 nc|ENSG00000171603|O94985-2|CLSTN1;;ENSG00000171603|ENST00000377298|CLSTN1 3.265360673268636 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10630 57.48 206.0 249020.0 25 0 28550.0 27735 PLLWEIDVFKV 11 85 453.5973558286426 1357.7702380861278 3 453.5975219607353 MULTI CID FTMS 0 0 0 10628 72691.6640625 0.1950555373312899 2 -0.1152229309082031 2 Unmodified _PLLWEIDVFKV_ ENST00000427960.5_1_2:190332350-190333254:+|nuORF 3.2813086475875832 0.8596665074481906 4 S 1 11 13.979 0.0 0.0 1.0296 0.0 0.0 1252.7268553730405 0.0 1252.7268553730405 0.0 -0.3398624916578558 -0.3398624916578558 0.0 0 0.0 0.0 0.0 0.0 S 1.0296 - 134 + 1 1.467 47287.4 1.0 5958 4670 10628 HBL1_DMSO_200M_050219_2,10630 HBL1_DMSO_200M_050219_2,10630,PLLWEIDVFKV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10631 57.481 10.0 4310300.0 25 0 805010.0 + 26535 NVIERLQEA 9 58 536.2933373506633 1070.5721217681264 2 536.2935058474541 MULTI CID FTMS 0 0 0 10628 5581812.0 1.0 0 0.0 3 Unmodified _NVIERLQEA_ ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT 32.78568957990786 0.1150597335874693 4 {[NV]|[RG]}{I|L}E 4 5 25.445 0.0 0.0 2.3768 0.0 0.0 0.0 612.3118990533811 612.3118990533811 7.725380570416149 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {[NV]|[RG]}{I|L}E 2.3768 + + 164 + 1 1.467 40696.0 1.0 5959 4670 10628 HBL1_DMSO_200M_050219_2,10631 HBL1_DMSO_200M_050219_2,10631,NVIERLQEA True True NVIERLQEA 57.480833 536.293505847454 41292240.0 10628.0 ENSG00000126756|ENST00000333119|UXT;;nc|ENSG00000126756|Q9UBK9-2|UXT 3.595221837361654 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10632 57.484 177.0 1263300.0 25 0 136730.0 + + 37074 SAPDALKI 8 151 407.7371187521932 813.4596845711865 2 407.7370788455009 MULTI CID FTMS 0 0 0 10628 581217.9375 0.6889998149229589 -2 0.0841560363769531 4 Unmodified _TGIPTNVI_ ENSG00000137642|ENST00000260197|SORL1 36.04419817259434 0.3004715606373109 4 {[SA]|[TG]}PDA{I|L}K{I|L} 8 -1 + 49.651 0.0 0.0 6.1037 6.1037 83.089 0.0 0.0 0.0 23.53830378720197 6.690067809585756 6.690067809585756 6.690067809585756 0 0.3807196863200844 2.0 0.0 0.531234684152075 {[SA]|[TG]}PDA{I|L}K{I|L};{[SA]|[TG]}PDA{I|L}{I|L}K;{[SA]|[TG]}G[EP]{I|L}K{I|L};{[SA]|[TG]}G[EP]{I|L}{I|L}K;{[SA]|[TG]}PDVVKV;{[SA]|[TG]}PDVVVK;{[SA]|[TG]}{I|L}P[K{I|L}]{[DA]|[EG]} 6.1037;5.2813;4.3223;3.4999;3.4148;3.286;2.4071 -;-;-;-;-;-;- 518 + 1 1.467 175065.8 1.0 5960 4670 10628 HBL1_DMSO_200M_050219_2,10632 HBL1_DMSO_200M_050219_2,10632,TGIPTNVI False False SAPDALKI 57.484271 407.737078845501 6942250.5 10628.0 ENSG00000137642|ENST00000260197|SORL1 1.3969501455624898 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10633 57.488 173.0 242860.0 25 0 19631.0 + 26550 NVIQSTAVTTV 11 75 566.8138982935326 1131.613243653865 2 566.8141357302666 MULTI CID FTMS 0 0 0 10628 499235.25 1.0 0 0.0 5 Unmodified _NVIQSTAVTTV_ ENSG00000164022|ENST00000672341|AIMP1;nc|ENSG00000164022|Q12904-2|AIMP1 38.17557092003332 0.2405003631267018 4 {[TV]|[{I|L}S]}TG[HA]{M(Oxidation (M))|F}VTTV 11 6 {[TV]|[{I|L}S]}TG[HA]{M(Oxidation (M))|F}V + + 18.046 16.746 2.0611 1.5947 1.5947 44.364 0.0 0.0 0.0 0.0 2.579825241009239 0.0 0.0 0 0.0 0.0 0.5994850021680094 0.0 {[TV]|[{I|L}S]}TG[HA]{M(Oxidation (M))|F}VTTV 1.5947 - 272 + 1 1.467 42928.4 1.0 5961 4670 10628 HBL1_DMSO_200M_050219_2,10633 HBL1_DMSO_200M_050219_2,10633,NVIQSTAVTTV False True NVIQSTAVTTV 57.48765 566.814135730267 2523492.0 10628.0 nc|ENSG00000164022|Q12904-2|AIMP1;;ENSG00000164022|ENST00000672341|AIMP1 7.523482958475749 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10634 57.491 174.0 140060.0 25 0 14610.0 + 5286 DLAMQRRRA 9 60 558.8066724510072 1115.5987919688143 2 558.8065063357353 MULTI CID FTMS 0 0 0 10628 482374.21875 1.0 0 0.0 6 Unmodified _DLAMQRRRA_ REV__ENSG00000236383|ENST00000636331|CCDC200 2.059750862983233 0.8427793054688888 4 G 1 -1 3.0989 0.0 0.0 0.27778 0.0 0.0 930.4810226590472 125.072580205725 1055.5536028647723 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.27778 - 7 + 1 1.467 26057.3 1.0 5962 4670 10628 HBL1_DMSO_200M_050219_2,10634 HBL1_DMSO_200M_050219_2,10634,DLAMQRRRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10635 57.495 197.0 748360.0 25 0 65355.0 + 21440 LPHHIMVKI 9 163 363.2197224435889 1086.6373379309669 3 363.2193786501884 MULTI CID FTMS 0 0 0 10628 411309.09375 0.8591685605151921 -1 0.0458221435546875 7 Unmodified _LPHHIMVKI_ ENSG00000178974|ENST00000313833|FBXO34 18.1463463914782 0.3454829746528889 4 {I|L}PHH{I|L}MVK{I|L} 9 0 + 44.508 0.0 0.0 4.096 4.096 64.877 0.0 0.0 0.0 22.949543134715697 0.4062819452869348 0.4062819452869348 0.4062819452869348 0 0.5888903526330403 0.6777807052660807 0.0 0.1643943297944484 + + {I|L}PHH{I|L}MVK{I|L};{I|L}PHH{I|L}MV{I|L}K;{I|L}PH{I|L}HMVK{I|L};{I|L}PH{I|L}HMV{I|L}K;{I|L}PHH{I|L}{M(Oxidation (M))|F}PVK;{I|L}P{I|L}HHMVK{I|L};{I|L}P{I|L}HHMV{I|L}K;{I|L}PHH{I|L}{M(Oxidation (M))|F}PKV;{I|L}PH{I|L}H{M(Oxidation (M))|F}PVK;{I|L}PH{I|L}H{M(Oxidation (M))|F}PKV 4.096;4.0586;3.9077;3.8703;3.6415;3.6306;3.5932;3.5397;3.4532;3.3514 +;-;-;-;-;-;-;-;-;- + 828 + 1 1.467 125936.0 1.0 5963 4670 10628 HBL1_DMSO_200M_050219_2,10635 HBL1_DMSO_200M_050219_2,10635,LPHHIMVKI False True LPHHIMVKI 57.49481 363.219378650188 2051170.25 10628.0 ENSG00000178974|ENST00000313833|FBXO34 1.1789519786834717 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10636 57.498 185.0 194460.0 25 0 13745.0 5936 DQEHIKPPV 9 83 531.7828571950264 0 531.7834960818291 PEAK CID FTMS 0 0 0 10628 386499.375 1.0 0 0.0 8 Unmodified _DQEHIKPPV_ ENSG00000118200|ENST00000358823|CAMSAP2;nc|ENSG00000118200|Q08AD1-2|CAMSAP2;nc|ENSG00000118200|Q08AD1|CAMSAP2 8.593279151180031 0.3284076903191179 4 T 1 9 6.9897 0.0 0.0 0.65844 0.0 0.0 875.4139982261871 82.06697260074452 957.4809708269316 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.65844 - 25 + 1 1.467 33931.1 1.0 5964 4670 10628 HBL1_DMSO_200M_050219_2,10636 HBL1_DMSO_200M_050219_2,10636,DQEHIKPPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10637 57.503 230.0 299190.0 25 0 34435.0 -1 0 60 1029.4798280497748 2056.94510316635 2 1029.981127917767 MULTI CID FTMS 0 0 0 10628 315705.25 1.0 0 0.0 9 4 HEC(Carbamidomethyl (C)){I|L}N 5 -1 17.189 0.0 0.0 0.83565 0.0 0.0 1034.5040669633674 366.1778362913763 1400.6819032547437 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 HEC(Carbamidomethyl (C)){I|L}N 0.83565 - 317 + 1 1.467 55225.7 1.0 5965 4670 10628 HBL1_DMSO_200M_050219_2,10637 HBL1_DMSO_200M_050219_2,10637, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10638 57.507 206.0 542880.0 25 0 83519.0 30735 RGLRLQSH 8 113 483.7846294856224 965.5547060380449 2 483.7845641970634 MULTI CID FTMS 0 0 0 10628 248113.625 0.6662564889559988 1 -0.0378875732421875 10 Unmodified _RGLRLQSH_ ENSG00000074047|ENST00000361492|GLI2;ENST00000438299.5_1_2:121728002-121748192:+|nuORF;ENST00000452692.5_1_2:121728002-121748192:+|nuORF;nc|ENSG00000074047|P10070-1|GLI2;nc|ENSG00000074047|P10070-2|GLI2;nc|ENSG00000074047|P10070-3|GLI2;nc|ENSG00000074047|P10070-4|GLI2;nc|ENSG00000074047|P10070|GLI2 21.74664581756881 0.5868176546531598 4 [HN]T{I|L} 4 7 41.828 0.0 0.0 4.332 0.0 0.0 0.0 497.2968379562666 497.2968379562666 29.06345586872132 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3054621874040891 1.274227503252014 [HN]T{I|L} 4.332 - 474 1 1.467 89357.5 1.0 5966 4670 10628 HBL1_DMSO_200M_050219_2,10638 HBL1_DMSO_200M_050219_2,10638,RGLRLQSH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10640 57.511 0.18 211640000.0 25 0 42439000.0 + 4463 DAYALNHTL 9 67 509.2535253747258 1016.4924978162516 2 509.2540771365166 MULTI CID FTMS 0 0 0 10639 303379904.0 1.0 0 0.0 1 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 60.07390631473393 0.0260411565414776 4 {[DA]|[EG]}YA{I|L}N 6 3 57.708 0.0 0.0 5.6772 0.0 0.0 0.0 366.1795748346313 366.1795748346313 29.96916566231569 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YA{I|L}N 5.6772 + + 177 + 1 1.467 37143.9 1.0 5967 4671 10639 HBL1_DMSO_200M_050219_2,10640 HBL1_DMSO_200M_050219_2,10640,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10641 57.513 92.0 1351500.0 25 0 153680.0 + 26888 PDGRIIKV 8 99 449.27944708668826 896.5443412401765 2 449.2793762087822 MULTI CID FTMS 0 0 0 10639 339872.40625 0.344935017501875 3 -0.2133064270019531 2 Unmodified _PDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 38.17557092003332 0.2648138137323925 4 [{I|L}A][RV]KDPV 8 6 + 38.471 0.0 0.0 4.291 4.291 76.592 0.0 0.0 0.0 3.9232681533000857 20.310005225165764 3.9232681533000857 7.730012720637379 0 0.2887254899964357 1.6989700043360187 0.0 0.0 [{I|L}A][RV]KDPV;[{I|L}A][RV][DP]KV;PDV[KA]{I|L}RV;[EP][RK]{I|L}[VG]V;[PA]T[Q{I|L}]{I|L}RV;[TP]A[Q{I|L}]{I|L}RV;[PS][RV]A{I|L}[VG]V 4.291;3.4288;3.3484;2.3389;2.1153;1.6674;0.8307 -;-;-;-;-;-;- 285 1 1.467 101602.1 1.0 5968 4671 10639 HBL1_DMSO_200M_050219_2,10641 HBL1_DMSO_200M_050219_2,10641,PDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10642 57.517 249.0 458260.0 25 0 72012.0 + -1 MYGHNMDQACQ 11 111 693.7473585381757 1385.4801641431511 2 693.7477294802666 MULTI CID FTMS 0 0 0 10639 781331.25 0.5738227437478645 3 -0.2133064270019531 3 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))YGHNM(Oxidation (M))DQAC(Carbamidomethyl (C))Q_ REV__nc|ENSG00000253534|A0A0A6YYG3|TRBV6-8 1.3295316138638542 0.8688751186870782 4 VV{M(Oxidation (M))|F}DASS 7 -1 48.492 0.0 0.0 3.5 0.0 0.0 285.08460857850133 392.0755404108032 677.1601489893045 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4291746928241125 0.0 VV{M(Oxidation (M))|F}DASS 3.5 - 496 + 1 1.467 85344.3 1.0 5969 4671 10639 HBL1_DMSO_200M_050219_2,10642 HBL1_DMSO_200M_050219_2,10642,MYGHNMDQACQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10643 57.522 275.0 531900.0 25 0 35948.0 + 29716 QPLATYTTV 9 163 497.2662370504306 992.5179211676613 2 497.2662841677666 MULTI CID FTMS 0 0 0 10639 579765.25 0.0698933098702128 -4 0.2746429443359375 4 Unmodified _QPLATYTTV_ chr11:111357710-111357799|28|11.0|0.36|4.95|-|0|POU2AF1,None|1;ENSG00000110777|ENST00000393067|POU2AF1 61.357469665136826 0.0253304979873734 4 {[VA]|[{I|L}G]}PPQYT 7 7 34.759 0.0 0.0 3.5021 0.0 0.0 0.0 233.11069048111952 233.11069048111952 8.224955267028701 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5 0.6861818737241735 {[VA]|[{I|L}G]}PPQYT 3.5021 - 4221 1 1.467 113723.9 1.0 5970 4671 10639 HBL1_DMSO_200M_050219_2,10643 HBL1_DMSO_200M_050219_2,10643,QPLATYTTV True True QPLATYTTV 57.52247 497.266284167767 68608152.0 10639.0 ENSG00000110777|ENST00000393067|POU2AF1;;chr11:111357710-111357799|28|11.0|0.36|4.95|-|0|POU2AF1,None|2 4.790424982706706 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10644 57.525 103.0 1051100.0 25 0 126150.0 + 1729 ALPVGSQKV 9 94 449.7712510332512 897.5279491333024 2 449.7705261111259 MULTI CID FTMS 0 0 0 10639 534961.0 0.3121311542364864 -2 0.083709716796875 5 Unmodified _ALPVGSQKV_ REV__ENSG00000119285|ENST00000366582|HEATR1 26.88365393820708 0.1891292719743517 4 [{I|L}A]PET[R{I|L}]V 8 -1 + 41.053 0.0 0.0 4.574 4.574 84.262 0.0 0.0 0.0 8.86931783443302 1.2595562582525588 1.2595562582525588 30.752574989159942 0 0.4247425010840047 1.6989700043360187 0.3494850021680094 0.0 [{I|L}A]PET[R{I|L}]V;P[{I|L}A]ET[R{I|L}]V 4.574;1.1477 -;- 171 + 1 1.467 89367.0 1.0 5971 4671 10639 HBL1_DMSO_200M_050219_2,10644 HBL1_DMSO_200M_050219_2,10644,ALPVGSQKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10645 57.531 338.0 378110.0 25 0 48498.0 + 42197 VSEPLAPL 8 141 413.2385038065141 824.4624546798283 2 413.2387573122978 MULTI CID FTMS 0 0 0 10639 427065.09375 0.7917675102904238 -1 0.0378875732421875 6 Unmodified _VSEPLAPL_ REV__ENSG00000158828|ENST00000321556|PINK1;REV__ENST00000400490.2_1_1:20972014-20977181:+|nuORF;REV__ENST00000492302.1_1_1:20975445-20977181:+|nuORF;REV__nc|ENSG00000158828|Q9BXM7-2|PINK1 2.889219685676258 0.8067950007271085 4 {I|L} 1 -1 8.6292 0.0 0.0 1.0466 0.0 0.0 693.3674209657643 0.0 693.3674209657643 0.0 0.2608900583253586 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0466 + + 26 + 1 1.467 103632.0 1.0 5972 4671 10639 HBL1_DMSO_200M_050219_2,10645 HBL1_DMSO_200M_050219_2,10645,VSEPLAPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10646 57.537 342.0 538180.0 25 0 83627.0 + 5000 DGTTPLHI 8 159 427.22445789362513 852.4343628540503 2 427.2238036990166 MULTI CID FTMS 0 0 0 10639 413959.40625 0.5855597882548209 -2 0.083709716796875 7 Unmodified _DGTTPLHI_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 34.18733598223924 0.3315367612694167 4 TTP{I|L}H{I|L} 6 2 22.229 0.0 0.0 2.6077 0.0 0.0 172.04069937924402 0.0 172.04069937924402 0.0 2.764706236572472 0.0 0.0 0 0.0 0.0 0.0 0.0 + TTP{I|L}H{I|L} 2.6077 + + 341 + 1 1.467 147645.7 1.0 5973 4671 10639 HBL1_DMSO_200M_050219_2,10646 HBL1_DMSO_200M_050219_2,10646,DGTTPLHI False True DGTTPLHI 57.536985 427.223803699017 10847151.0 10639.0 ENSG00000109320|ENST00000226574|NFKB1;;nc|ENSG00000109320|P19838|NFKB1;;nc|ENSG00000109320|P19838-3|NFKB1 5.082857052485148 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10647 57.543 336.0 324610.0 25 0 48113.0 + 45914 YYVAHPPVTY 10 116 605.3006724495232 1208.5867919658465 2 605.3000366091728 MULTI CID FTMS 0 0 0 10639 344852.4375 0.8791097945022089 -1 0.0378875732421875 8 Unmodified _YYVAHPPVTY_ ENSG00000183508|ENST00000369448|TENT5C 133.70201269244603 0.0002098863921339 4 YYVAHP[VP]TY 10 0 + 112.57 0.0 0.0 9.314 9.314 84.934 0.0 0.0 0.0 82.32418579487147 15.026975159433531 15.026975159433531 2.795000083553205 0 2.3807196863200843 2.0 1.7614393726401687 0.0 + + YYVAHP[VP]TY;YYVAH[RH]TY;YYVAHP{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]};YYVAHP[{I|L}T][{M(Oxidation (M))|F}V];YYVAH{[QN]|[E{I|L}]|[KN]}P{[MS]|[{M(Oxidation (M))|F}A]};YYVA{[QN]|[E{I|L}]|[KN]}HP{[MS]|[{M(Oxidation (M))|F}A]};YYVAHPQG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};YYV[EP]YT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};Y{M(Oxidation (M))|F}[VS]HP[VP]TY;Y{M(Oxidation (M))|F}[VS]H[RH]TY 9.314;9.0828;6.9758;6.9103;6.5378;5.855;5.741;5.5657;5.0629;4.8316 +;-;-;-;-;-;-;-;-;- + 973 + 1 1.467 80888.0 1.0 5974 4671 10639 HBL1_DMSO_200M_050219_2,10647 HBL1_DMSO_200M_050219_2,10647,YYVAHPPVTY True True YYVAHPPVTY 57.543085 605.300036609173 3322294.5 10639.0 ENSG00000183508|ENST00000369448|TENT5C 9.497271219889322 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10648 57.549 345.0 209520.0 25 0 21720.0 + 916 AFADYRPTEV 10 92 584.7856398808087 1167.5567268284174 2 584.7866088747978 MULTI CID FTMS 0 0 0 10639 296756.4375 1.0 0 0.0 9 Unmodified _AFADYRPTEV_ ENSG00000150768|ENST00000280346|DLAT;ENST00000533297.1_1_11:111896132-111933256:+|nuORF 28.49450938151212 0.328477364964909 4 {[MS]|[{M(Oxidation (M))|F}A]}ADYR{[ET]|[MV]}PV 10 2 + 39.078 0.0 0.0 3.347 3.347 74.914 0.0 0.0 0.0 23.90092514408778 1.6824376479242176 1.6824376479242176 9.164539485499253 0 1.3494850021680094 0.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}ADYR{[ET]|[MV]}PV;{[MS]|[{M(Oxidation (M))|F}A]}ADY[VG]{[ET]|[MV]}PV;[KG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RYDA{[CP]|[EA]};[{I|L}T]{[ET]|[MV]}RYDA{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}WYR{[ET]|[MV]}PV;[{I|L}T]{[ET]|[MV]}[VG]YDA{[TV]|[{I|L}S]};[KG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VG]YDA{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}VTC{[DS]|[MA]|[CV]|TT}{[ET]|[MV]}PV;{[MS]|[{M(Oxidation (M))|F}A]}VT{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TD[RD];{[MS]|[{M(Oxidation (M))|F}A]}WY[VG]{[ET]|[MV]}PV 3.347;2.5621;2.5145;2.5145;2.3593;1.7296;1.7296;1.6803;1.6104;1.5706 -;-;-;-;-;-;-;-;-;- 139 + 1 1.467 62487.9 1.0 5975 4671 10639 HBL1_DMSO_200M_050219_2,10648 HBL1_DMSO_200M_050219_2,10648,AFADYRPTEV False True AFADYRPTEV 57.549341 584.786608874798 1544878.375 10639.0 ENSG00000150768|ENST00000280346|DLAT;;ENST00000533297.1_1_11:111896132-111933256:+|nuORF 7.787258307139079 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10649 57.556 359.0 394810.0 25 0 29014.0 + + 27568 LPAPAVEHI 9 153 473.2710007253411 944.5274485174822 2 473.7711974978447 MULTI CID FTMS 0 0 0 10639 309858.65625 0.4811428726152184 9 -0.8985404968261719 10 Unmodified _PLATSTRSL_ ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1 19.438996006549623 0.310492472477042 4 PAPAVEH{I|L} 8 -1 51.311 0.0 0.0 5.4325 0.0 0.0 112.08200347091277 0.0 112.08200347091277 0.0 1.9707121615429912 0.0 0.0 0 0.0 0.0 1.1237125054200234 0.0 PAPAVEH{I|L} 5.4325 - 2173 + 1 1.467 109556.7 1.0 5976 4671 10639 HBL1_DMSO_200M_050219_2,10649 HBL1_DMSO_200M_050219_2,10649,PLATSTRSL False False LPAPAVEHI 57.555797 473.771197497845 10272923.0 10639.0 ENSG00000163349|ENST00000426820|HIPK1;;nc|ENSG00000163349|Q86Z02-2|HIPK1 5.213000774383545 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10650 57.562 351.0 244330.0 25 0 17821.0 + 9961 FPGKHFQEI 9 123 551.7875691100098 1101.5605852868196 2 551.7874633669853 MULTI CID FTMS 0 0 0 10639 275889.03125 0.0589094740086576 50 -4.974102020263672 11 Unmodified _FPGKHFQEI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 47.7319792270244 0.0453426645642791 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HEGA{M(Oxidation (M))|F}{I|L} 10 4 + 47.11 0.0 0.0 4.2766 4.2766 68.579 0.0 0.0 0.0 4.823833526235546 5.704642090149882 4.823833526235546 1.883957647232272 0 1.25 1.6989700043360187 0.3054621874040891 0.3807196863200844 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HEGA{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQE{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HEQ{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}Q[VP]C(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]HQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H{M(Oxidation (M))|F}QE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]H{M(Oxidation (M))|F}Q{I|L}E;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}C{I|L};{[QN]|[E{I|L}]|[KN]}Q[VP]WA{M(Oxidation (M))|F}{I|L} 4.2766;4.1056;3.9569;3.8387;3.7808;3.7588;3.6436;3.6216;3.6063;3.5654 -;-;-;-;-;-;+;-;-;- + 934 1 1.467 71333.4 1.0 5977 4671 10639 HBL1_DMSO_200M_050219_2,10650 HBL1_DMSO_200M_050219_2,10650,FPGKHFQEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10651 57.569 391.0 216520.0 25 0 9150.0 -1 0 106 845.7137886550054 2534.119536565216 3 846.0477172732353 MULTI CID FTMS 0 0 0 10639 261827.296875 1.0 0 0.0 12 4 {[QD]|[EN]|[WG]|[KD]|[RS]}DPVD 6 -1 22.7 0.0 0.0 0.89576 0.0 0.0 0.0 1861.83578139633 1861.83578139633 4.2833437946091415 0.0 0.0 0.0 0 0.0 0.0 0.5114393726401688 0.6237125054200234 {[QD]|[EN]|[WG]|[KD]|[RS]}DPVD 0.89576 - 722 1 1.467 65557.2 1.0 5978 4671 10639 HBL1_DMSO_200M_050219_2,10651 HBL1_DMSO_200M_050219_2,10651, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10652 57.577 375.0 184170.0 25 0 21518.0 + 9020 FDLILKKNKKI 11 88 680.4425916257579 0 680.4429199099541 PEAK CID FTMS 0 0 0 10639 245016.25 0.5390728314723949 -3 0.1220436096191406 13 Unmodified _FDLILKKNKKI_ REV__ENSG00000140993|ENST00000396862|TIGD7;REV__nc|ENSG00000140993|Q6NT04-2|TIGD7 1.3295316138638542 0.4761840153648598 4 WYA{I|L}NS 6 -1 11.693 0.0 0.0 0.86047 0.0 0.0 342.3767637848794 279.1456392877563 621.5224030726357 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WYA{I|L}NS 0.86047 - 100 + 1 1.467 61586.8 1.0 5979 4671 10639 HBL1_DMSO_200M_050219_2,10652 HBL1_DMSO_200M_050219_2,10652,FDLILKKNKKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10653 57.584 385.0 106760.0 25 0 9547.4 -1 0 82 712.0587646365166 0 712.0587646365166 PEAK CID FTMS 0 0 0 -1 0 14 4 A 1 -1 1.9897 0.0 0.0 0.13991 0.0 0.0 1215.996712157019 132.04604517154533 1348.0427573285642 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.13991 - 20 + 1 1.467 34235.0 1.0 5980 4671 10639 HBL1_DMSO_200M_050219_2,10653 HBL1_DMSO_200M_050219_2,10653, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10655 57.594 390.0 413290.0 25 0 28401.0 + 21330 LPFDHTRVV 9 142 542.3018887420697 0 542.3019286990166 PEAK CID FTMS 0 0 0 10654 295940.875 0.5328277809973387 2 -0.1359710693359375 1 Unmodified _LPFDHTRVV_ ENSG00000179295|ENST00000351677|PTPN11;ENST00000511359.1_1_5:23303923-23304922:-|nuORF;nc|ENSG00000179295|Q06124-1|PTPN11;nc|ENSG00000179295|Q06124-3|PTPN11 55.50274090549119 0.0215595200729321 4 P{M(Oxidation (M))|F}DHT 5 4 41.013 0.0 0.0 3.7885 0.0 0.0 113.08312239179084 369.22654138736567 482.3096637791565 0.0 0.0 0.0 0.0 0 0.6505149978319906 0.0 1.305462187404089 0.0 + P{M(Oxidation (M))|F}DHT 3.7885 + + 771 + 1 1.435 132983.1 1.0 5981 4672 10654 HBL1_DMSO_200M_050219_2,10655 HBL1_DMSO_200M_050219_2,10655,LPFDHTRVV True True LPFDHTRVV 57.594139 542.301928699017 2846361.5 10654.0 nc|ENSG00000179295|Q06124-3|PTPN11;;nc|ENSG00000179295|Q06124-1|PTPN11;;ENST00000511359.1_1_5:23303923-23304922:-|nuORF;;ENSG00000179295|ENST00000351677|PTPN11 5.389615535736084 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10656 57.6 314.0 618960.0 25 0 53534.0 + 13940 HYIIAARAL 9 150 514.3057172271699 1026.5968815211395 2 514.3054687380791 MULTI CID FTMS 0 0 0 10654 516583.125 0.3670251483672673 -3 0.1610450744628906 2 Unmodified _HYIIAARAL_ ENSG00000100029|ENST00000354694|PES1;nc|ENSG00000100029|O00541-2|PES1 36.506200033944 0.094635877243972 4 HY{I|L}{I|L}A 5 4 67.652 0.0 0.0 6.5899 0.0 0.0 0.0 426.2479342096313 426.2479342096313 26.682437647924218 0.0 0.0 0.0 0 1.8723637474483468 1.6989700043360187 0.0 0.0 + HY{I|L}{I|L}A 6.5899 + + 362 + 1 1.435 150391.7 1.0 5982 4672 10654 HBL1_DMSO_200M_050219_2,10656 HBL1_DMSO_200M_050219_2,10656,HYIIAARAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10657 57.606 315.0 1271800.0 25 0 100840.0 + 38295 TQFGGKRPFGV 11 150 597.3249145761489 1192.6352762190977 2 597.3259765505791 MULTI CID FTMS 0 0 0 10654 460552.5625 0.8215454239467653 -2 0.1152229309082031 3 Unmodified _TQFGGKRPFGV_ ENSG00000041357|ENST00000044462|PSMA4;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4 40.23920728925047 0.2087110615831976 4 TQ{M(Oxidation (M))|F}VR{I|L}T 7 7 62.349 0.0 0.0 5.2278 0.0 0.0 0.0 344.13678918874825 344.13678918874825 26.999868935529747 0.0 0.0 0.0 0 0.5 0.9208187539523752 0.6505149978319906 1.274227503252014 TQ{M(Oxidation (M))|F}VR{I|L}T 5.2278 - 1427 + 1 1.435 290965.3 1.0 5983 4672 10654 HBL1_DMSO_200M_050219_2,10657 HBL1_DMSO_200M_050219_2,10657,TQFGGKRPFGV False True TQFGGKRPFGV 57.60563 597.325976550579 10578342.0 10654.0 ENSG00000041357|ENST00000044462|PSMA4;;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;;nc|ENSG00000041357|P25789-2|PSMA4 5.375227689743042 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10658 57.613 384.0 510170.0 25 0 46775.0 -1 YRCEADEL 8 166 352.4876376923169 1054.4410836771508 3 352.4871093630791 MULTI CID FTMS 0 0 0 10654 417211.5 1.0 0 0.0 4 Carbamidomethyl (C) _YRC(Carbamidomethyl (C))EADEL_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;ENST00000489156.1_1_6:152599163-152623219:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1 8.745405648335112 0.7712480472641603 4 {[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}{I|L}{M(Oxidation (M))|F}GM{I|L} 9 -1 {[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}{I|L}{M(Oxidation (M))|F}GM + + 12.474 -3.5724 -0.3869 1.183 1.183 44.258 0.0 0.0 0.0 0.0 -5.2287874528033775 -5.2287874528033775 0.0 0 0.0 0.0 0.0 0.0 {[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}{I|L}{M(Oxidation (M))|F}GM{I|L} 1.183 - 108 + 1 1.435 157141.1 1.0 5984 4672 10654 HBL1_DMSO_200M_050219_2,10658 HBL1_DMSO_200M_050219_2,10658,YRCEADEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10659 57.619 357.0 427400.0 25 0 56705.0 + 38825 TVGPVQKLV 9 142 470.7951235436513 939.5756941541026 2 470.7950622439384 MULTI CID FTMS 0 0 0 10654 362369.5 1.0 0 0.0 5 Unmodified _TVGPVQKLV_ ENSG00000129083|ENST00000439561|COPB1 54.773552608820026 0.0299037012502309 4 {[TV]|[{I|L}S]}GPVQK{I|L}V 9 0 + 51.666 0.0 0.0 5.4988 5.4988 81.375 0.0 0.0 0.0 15.01016889216956 7.596678446896306 7.596678446896306 7.596678446896306 0 0.7302046884880937 2.0 0.0 0.2302046884880938 + + {[TV]|[{I|L}S]}GPVQK{I|L}V;{[TV]|[{I|L}S]}GPVQKV{I|L};{[TV]|[{I|L}S]}GPV[AG]K{I|L}V;{[TV]|[{I|L}S]}GPV[AG]KV{I|L};{[TV]|[{I|L}S]}G{I|L}{I|L}[KA]AAP;{[QV]|[N{I|L}]|[RA]|[KV]}PGKQ[RK];[KQ]PRQ[RK];{[QV]|[N{I|L}]|[RA]|[KV]}GPKQ[RK];[KQ]PQR[RK];[PG][KA]RQ[RK] 5.4988;4.6903;4.5188;3.7103;1.7543;1.7428;1.6143;1.0476;1.0352;0.86019 +;-;-;-;-;-;-;-;-;- + 1886 + 1 1.435 119283.2 1.0 5985 4672 10654 HBL1_DMSO_200M_050219_2,10659 HBL1_DMSO_200M_050219_2,10659,TVGPVQKLV True True TVGPVQKLV 57.618941 470.795062243938 2674368.25 10654.0 ENSG00000129083|ENST00000439561|COPB1 5.550413767496745 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10660 57.627 431.0 159080.0 25 0 21990.0 -1 0 56 1036.974414050579 0 1036.974414050579 PEAK CID FTMS 0 0 0 -1 0 6 4 {I|L}EC(Carbamidomethyl (C)){I|L}N 5 -1 23.811 0.0 0.0 1.1492 0.0 0.0 1073.4515614001832 366.1785677545532 1439.6301291547363 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6643943297944485 {I|L}EC(Carbamidomethyl (C)){I|L}N 1.1492 - 150 + 1 1.435 49855.3 1.0 5986 4672 10654 HBL1_DMSO_200M_050219_2,10660 HBL1_DMSO_200M_050219_2,10660, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10661 57.633 369.0 664060.0 25 0 109400.0 + 31527 RQIEYEYKL 9 130 621.3298826380179 1240.6452123428355 2 621.3296386599541 MULTI CID FTMS 0 0 0 10654 289272.46875 0.0483352403453366 -3 0.1610450744628906 7 Unmodified _RQIEYEYKL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF 71.70789743142352 0.0204387454931768 4 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EYEYK{I|L} 9 0 + 73.03 0.0 0.0 5.8865 5.8865 78.03 0.0 0.0 0.0 3.4242268082220733 14.973024840566469 3.4242268082220733 3.4242268082220733 0 1.774227503252014 0.0 0.3494850021680094 1.0189301784845295 + + {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EYEYK{I|L};[Q{I|L}]REYEYK{I|L};[YK][VP]{[DS]|[MA]|[CV]|TT}EYK{I|L};[{M(Oxidation (M))|F}V][K{I|L}]{[DS]|[MA]|[CV]|TT}EYK{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EYTY[VG]{I|L};[Q{I|L}]REYTY[VG]{I|L};[Q{I|L}]M{I|L}{[CT]|[{M(Oxidation (M))|F}G]}EYK{I|L};{[WT]|[RM]}VV{[CT]|[{M(Oxidation (M))|F}G]}EYK{I|L};[YK][VP]{[DS]|[MA]|[CV]|TT}TYR{I|L};[{M(Oxidation (M))|F}V][K{I|L}]{[DS]|[MA]|[CV]|TT}TYR{I|L} 5.8865;5.6105;4.3176;4.2528;3.8278;3.5518;3.4772;3.291;3.0011;2.9363 +;-;-;-;-;-;-;-;-;- + 1125 1 1.435 184488.0 1.0 5987 4672 10654 HBL1_DMSO_200M_050219_2,10661 HBL1_DMSO_200M_050219_2,10661,RQIEYEYKL True True RQIEYEYKL 57.633314 621.329638659954 79950392.0 10654.0 ENST00000504788.5_1_5:126112928-126171953:+|nuORF;;chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;;ENSG00000113368|ENST00000261366|LMNB1 6.647013823191325 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10662 57.641 412.0 326350.0 25 0 22438.0 + 2050 APLPPHLPGA 10 163 485.28038741110686 968.5462218890136 2 485.2815429568291 MULTI CID FTMS 0 0 0 10654 205206.125 0.8212524238410978 -2 0.1152229309082031 8 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 40.44857923139169 0.1528301697436547 4 [PA]{I|L} 3 7 26.461 0.0 0.0 2.732 0.0 0.0 0.0 684.3485344712981 684.3485344712981 3.819415077663596 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + [PA]{I|L} 2.732 + + 1046 1 1.435 104109.7 1.0 5988 4672 10654 HBL1_DMSO_200M_050219_2,10662 HBL1_DMSO_200M_050219_2,10662,APLPPHLPGA False True False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 10663 57.648 388.0 266760.0 25 0 33172.0 19357 LEPPVYVPPP 10 125 554.3083655812529 1106.6021782293058 2 554.3064453005791 MULTI CID FTMS 0 0 0 10654 206729.953125 0.6225292269396475 -3 0.1610450744628906 9 Unmodified _LEPPVYVPPP_ ENSG00000165757|ENST00000375377|JCAD 6.723162845929126 0.6955379296933136 4 {[DA]|[EG]}G 3 9 12.944 0.0 0.0 1.1697 0.0 0.0 0.0 860.4939836094417 860.4939836094417 1.6850274609209863 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.2742275032520141 0.0 {[DA]|[EG]}G 1.1697 - 48 1 1.435 83907.5 1.0 5989 4672 10654 HBL1_DMSO_200M_050219_2,10663 HBL1_DMSO_200M_050219_2,10663,LEPPVYVPPP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10664 57.656 396.0 414350.0 25 0 51993.0 37765 TLRRMQTHL 9 127 578.3229559983047 1154.6313590634093 2 578.8240234255791 MULTI CID FTMS 0 0 0 10654 198168.390625 1.0 0 0.0 10 Unmodified _TLRRMQTHL_ ENST00000417226.6_1_3:128998609-129007820:+|nuORF 18.13498045792455 0.3457906370836843 4 [{I|L}T]HN 4 6 37.281 0.0 0.0 3.2289 0.0 0.0 0.0 686.3737656398342 686.3737656398342 14.827152213782746 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.5866968715561641 0.4247425010840047 [{I|L}T]HN 3.2289 - 300 1 1.435 128563.8 1.0 5990 4672 10654 HBL1_DMSO_200M_050219_2,10664 HBL1_DMSO_200M_050219_2,10664,TLRRMQTHL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10665 57.664 461.0 527210.0 25 0 54914.0 + 20604 MPSPVSPKL 9 195 478.7731303666929 0 478.7726928591728 PEAK CID FTMS 0 0 0 10654 209953.71875 0.5492648774452376 3 -0.2652549743652344 11 Unmodified _LLPETRDL_ ENSG00000072364|ENST00000265343|AFF4 14.581692164780916 0.4900557725783909 4 {I|L}{I|L}AA 4 6 17.713 0.0 0.0 1.8537 0.0 0.0 185.06269677044776 399.2023714654906 584.2650682359384 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}AA 1.8537 - 612 + 1 1.435 184496.0 1.0 5991 4672 10654 HBL1_DMSO_200M_050219_2,10665 HBL1_DMSO_200M_050219_2,10665,LLPETRDL False False MPSPVSPKL 57.664066 478.772692859173 3317815.75 10654.0 ENSG00000072364|ENST00000265343|AFF4 2.505940039952596 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10667 57.668 0.77 78342000.0 25 0 15699000.0 + 44665 YPFKPPKV 8 67 325.86056900573425 974.5598776174028 3 325.8603393435478 MULTI CID FTMS 0 0 0 10666 62016476.0 0.9610914676945506 -2 0.1574211120605468 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 43.032 0.0 0.0 4.4155 4.4155 83.288 0.0 0.0 0.0 15.584588059845998 4.958669108970497 4.958669108970497 23.87640052032225 0 0.25 0.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]KPP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};Y[{I|L}T]K[HS]KV 4.4155;1.9656;1.5465;0.61986 +;-;-;- + 169 + 1 1.407 55788.9 1.0 5992 4673 10666 HBL1_DMSO_200M_050219_2,10667 HBL1_DMSO_200M_050219_2,10667,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10668 57.669 4.8 9113300.0 25 0 2367400.0 -1 0 59 318.19664923749616 634.3787455417923 2 318.1961547732353 MULTI CID FTMS 0 0 0 10666 11641689.0 0.9772030780788658 1 -0.0558853149414062 2 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.407 43047.2 1.0 5993 4673 10666 HBL1_DMSO_200M_050219_2,10668 HBL1_DMSO_200M_050219_2,10668, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10669 57.671 12.0 2724900.0 25 0 170650.0 + 6521 EALAAVRFAQ 10 66 538.2978194603375 1074.5810859874748 2 538.2979003787041 MULTI CID FTMS 0 0 0 10666 2608950.5 0.4491100386088755 -2 0.1574211120605468 3 Unmodified _EALAAVRFAQ_ REV__ENSG00000237412|ENST00000617714|PRSS56 6.723162845929126 0.6955379296933136 4 PYV 3 -1 24.693 0.0 0.0 2.2979 0.0 0.0 0.0 712.3590181940061 712.3590181940061 15.01502755069862 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PYV 2.2979 - 31 + 1 1.407 30658.9 1.0 5994 4673 10666 HBL1_DMSO_200M_050219_2,10669 HBL1_DMSO_200M_050219_2,10669,EALAAVRFAQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10670 57.672 30.0 2053900.0 25 0 239370.0 + 21219 LPDGRIIKV 9 59 505.8221480641613 1009.6297431951224 2 505.8227722048759 MULTI CID FTMS 0 0 0 10666 1838510.875 0.0664030668319708 5 -0.5187187194824219 4 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 40.72490554402381 0.0714771638475563 4 {I|L}PD 3 6 50.49 0.0 0.0 5.0008 0.0 0.0 0.0 681.4439924760862 681.4439924760862 21.104159301997 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3494850021680094 0.0 + {I|L}PD 5.0008 + + 56 + 1 1.407 54286.8 1.0 5995 4673 10666 HBL1_DMSO_200M_050219_2,10670 HBL1_DMSO_200M_050219_2,10670,LPDGRIIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10671 57.673 75.0 1172200.0 25 0 248970.0 + 18277 KVIESFIKA 9 103 517.8151928274264 1033.6158327216526 2 517.8152953982353 MULTI CID FTMS 0 0 0 10666 1309644.875 0.4292151508149925 4 -0.4240989685058594 5 Unmodified _KVIESFIKA_ ENSG00000139687|ENST00000267163|RB1 63.22749603027936 0.0242951379232427 4 KV{I|L}H[EP]{I|L} 7 5 57.44 0.0 0.0 5.5572 0.0 0.0 0.0 214.1204775445922 214.1204775445922 30.74494482749841 0.0 0.0 0.0 0 2.048455006504028 1.2218487496163564 0.0 0.0 KV{I|L}H[EP]{I|L} 5.5572 - 613 + 1 1.407 71811.8 1.0 5996 4673 10666 HBL1_DMSO_200M_050219_2,10671 HBL1_DMSO_200M_050219_2,10671,KVIESFIKA True True KVIESFIKA 57.673432 517.815295398235 50143240.0 10666.0 ENSG00000139687|ENST00000267163|RB1 6.63361406326294 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10672 57.676 95.0 962030.0 25 0 145240.0 + -1 MCFDAFSLNCM 11 90 685.7499676702942 1369.4853824073882 2 685.7509033083916 MULTI CID FTMS 0 0 0 10666 1289736.625 0.0548603860475756 6 -0.6283035278320312 6 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))FDAFSLNCM(Oxidation (M))_ REV__ENSG00000138039|ENST00000294954|LHCGR;REV__nc|ENSG00000138039|P22888-2|LHCGR 5.731851221503515 0.8481046878870278 4 VYMDASS 7 -1 54.699 0.0 0.0 3.9941 0.0 0.0 221.0848219599257 392.0750216119751 613.1598435719008 0.0 0.0 0.0 0.0 0 0.0 0.0 2.024227503252014 0.0 VYMDASS 3.9941 - 210 + 1 1.407 73085.7 1.0 5997 4673 10666 HBL1_DMSO_200M_050219_2,10672 HBL1_DMSO_200M_050219_2,10672,MCFDAFSLNCM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10673 57.677 73.0 2629100.0 25 0 543110.0 42711 VVAGIPRT 8 112 406.754850323561 811.495147713922 2 406.7545959353447 MULTI CID FTMS 0 0 0 10666 958812.9375 1.0 0 0.0 7 Unmodified _VVAGIPRT_ ENSG00000164733|ENST00000353047|CTSB 19.256988751693697 0.6264283240490721 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV 7 7 + 66.112 0.0 0.0 8.1469 8.1469 94.908 0.0 0.0 0.0 14.559975951582572 14.559975951582572 14.559975951582572 14.559975951582572 0 1.6549471895720984 2.0 0.0 0.2887254899964357 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPV;P{M(Oxidation (M))|F}KPPKV;[KP]{M(Oxidation (M))|F}PKPV;[KP]P{M(Oxidation (M))|F}KPV;[KP]PK{M(Oxidation (M))|F}PV;{[HG]|PP}K{M(Oxidation (M))|F}KPV;{[HG]|PP}KK{M(Oxidation (M))|F}PV;[K{I|L}]MPKPV;[{I|L}T]K[HS]KV;PRDVVKV 8.1469;6.3527;4.6952;4.4652;4.367;3.9748;3.8766;3.8077;1.6208;1.5444 -;-;-;-;-;-;-;-;-;- 321 1 1.407 149889.3 1.0 5998 4673 10666 HBL1_DMSO_200M_050219_2,10673 HBL1_DMSO_200M_050219_2,10673,VVAGIPRT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10674 57.679 89.0 1116500.0 25 0 76088.0 11329 GEYSASPLCL 10 122 520.2432545709054 1038.471956208611 2 520.2442504763603 MULTI CID FTMS 0 0 0 10666 759565.75 1.0 0 0.0 8 Unmodified _GEYSASPLCL_ ENSG00000205213|ENST00000379214|LGR4;nc|ENSG00000205213|Q9BXB1-2|LGR4 30.63653989081413 0.2803493085145199 4 {[DA]|[EG]}YR{I|L}C(Carbamidomethyl (C))E{I|L} 8 5 + 60.933 0.0 0.0 5.8675 5.8675 73.882 0.0 0.0 0.0 4.242340564755267 4.242340564755267 4.242340564755267 1.2622108931423384 0 1.5629529932484498 1.6989700043360187 0.0 0.0 {[DA]|[EG]}YR{I|L}C(Carbamidomethyl (C))E{I|L};{[DA]|[EG]}YA[PG][MT]T{I|L};{[DA]|[EG]}Y[QP][MT]T{I|L};{[DA]|[EG]}YA{I|L}RDC{I|L};{[DA]|[EG]}YR{I|L}ADC{I|L};{[DA]|[EG]}YA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VE{I|L};{[DA]|[EG]}YR[WD]T{I|L};{[DA]|[EG]}Y[VG]{I|L}C(Carbamidomethyl (C))E{I|L};{[DA]|[EG]}YR{I|L}[CG]E{I|L};{[DA]|[EG]}YAVVC(Carbamidomethyl (C))E{I|L} 5.8675;5.746;5.5217;5.459;5.2821;5.1722;5.135;4.9756;4.9756;4.7534 -;-;-;-;-;-;-;-;-;- 536 1 1.407 80503.8 1.0 5999 4673 10666 HBL1_DMSO_200M_050219_2,10674 HBL1_DMSO_200M_050219_2,10674,GEYSASPLCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10675 57.682 157.0 978500.0 25 0 144150.0 + 30772 RIAGIRGIQGV 11 105 380.57170053920834 1138.693272217825 3 380.5716430544853 MULTI CID FTMS 0 0 0 10666 715040.5 1.0 0 0.0 9 Unmodified _RIAGIRGIQGV_ ENSG00000132294|ENST00000254624|EFR3A;nc|ENSG00000132294|Q14156-2|EFR3A;nc|ENSG00000132294|Q14156-3|EFR3A 57.72198328787511 0.0783903820882629 4 [R{I|L}]Q{I|L}RG{I|L}QGV 10 2 + 63.185 0.0 0.0 5.5489 5.5489 83.032 0.0 0.0 0.0 0.1325134563396801 44.99745428442324 0.1325134563396801 9.164539485499256 0 1.305462187404089 0.0 0.0 1.1237125054200234 [R{I|L}]Q{I|L}RG{I|L}QGV;[R{I|L}][AG]{I|L}RG{I|L}QGV;[R{I|L}]Q{I|L}RG{I|L}[AG]GV;[VG][Q{I|L}]{I|L}RG{I|L}QR;[R{I|L}][AG]{I|L}RG{I|L}[AG]GV;[VG][Q{I|L}]{I|L}RG{I|L}[AG]R;[R{I|L}]Q{I|L}[VG]G{I|L}QR;[R{I|L}]Q{I|L}[VG]G{I|L}[AG]R;[R{I|L}][AG]{I|L}[VG]G{I|L}QR 5.5489;4.7441;4.7441;4.6409;3.9424;3.8361;3.3545;2.5497;2.5497 -;+;-;-;-;-;-;-;- + 162 1 1.407 130196.4 1.0 6000 4673 10666 HBL1_DMSO_200M_050219_2,10675 HBL1_DMSO_200M_050219_2,10675,RIAGIRGIQGV True True RIAGIRGIQGV 57.682305 380.571643054485 4317294.0 10666.0 nc|ENSG00000132294|Q14156-2|EFR3A;;nc|ENSG00000132294|Q14156-3|EFR3A;;ENSG00000132294|ENST00000254624|EFR3A 6.229227701822917 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10676 57.685 108.0 765630.0 25 0 58245.0 + 21467 LPHNPGPITV 10 118 522.7949853492111 1043.575417765222 2 522.7952148318291 MULTI CID FTMS 0 0 0 10666 524386.0625 0.5483513468505952 -2 0.1574211120605468 10 Unmodified _LPHNPGPITV_ ENSG00000133704|ENST00000256079|IPO8;nc|ENSG00000133704|O15397-2|IPO8 61.357469665136826 0.0330252915653943 4 [HN]PGP{I|L}P{I|L}TV 10 4 + 44.466 0.0 0.0 4.2609 4.2609 69.344 0.0 0.0 0.0 6.898962788844827 6.898962788844827 6.898962788844827 2.390690719683093 0 0.8182503180159344 0.7958800173440752 0.0 0.3252574989159953 [HN]PGP{I|L}P{I|L}TV;[HN]P{I|L}[PG]P{I|L}TV;[HN]PGPP{I|L}{I|L}TV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}P[PG]{[QD]|[EN]|[WG]|[KD]|[RS]}TV;[{I|L}P]HN[PG]P{I|L}TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGP{I|L}P{I|L}TV;[{M(Oxidation (M))|F}V]{I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{I|L}[PG]P{I|L}TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}N[PG]P{I|L}TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGPP{I|L}{I|L}TV 4.2609;4.0318;3.9724;3.5998;3.5746;3.3338;3.241;3.1047;3.0667;3.0453 -;-;-;-;+;-;-;-;-;- + 1051 1 1.407 71016.4 1.0 6001 4673 10666 HBL1_DMSO_200M_050219_2,10676 HBL1_DMSO_200M_050219_2,10676,LPHNPGPITV True True LPHNPGPITV 57.684609 522.795214831829 9273618.0 10666.0 nc|ENSG00000133704|O15397-2|IPO8;;ENSG00000133704|ENST00000256079|IPO8 7.470359166463216 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10677 57.686 46.0 912270.0 25 0 71016.0 + 36512 TAFESIKSV 9 86 491.2670079263678 980.5194629195356 2 491.2662536501884 MULTI CID FTMS 0 0 0 10666 525595.375 0.2703867855012298 4 -0.4240989685058594 11 Unmodified _TAFESIKSV_ chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1 17.11289562659939 0.3734572693229295 4 [YR]E[RK]MV 7 6 + 13.248 0.0 0.0 1.3512 1.3512 59.942 0.0 0.0 0.0 -3.434085938038578 1.258651666525452 -3.434085938038578 0.2802872360024349 0 0.0 0.0 0.3494850021680094 0.0 [YR]E[RK]MV;[YR]E{[TV]|[{I|L}S]}KSV 1.3512;1.3226 -;- 125 + 1 1.407 34890.6 1.0 6002 4673 10666 HBL1_DMSO_200M_050219_2,10677 HBL1_DMSO_200M_050219_2,10677,TAFESIKSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10678 57.688 80.0 472660.0 25 0 36339.0 + 4019 DALRSGLTV 9 72 466.2639604463565 930.5133679595132 2 466.2640869021416 MULTI CID FTMS 0 0 0 10666 413804.65625 0.0021009771264045 19 -2.0375747680664062 12 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 43.77239144664712 0.0547478964384323 4 {[DA]|[EG]}[R{I|L}][SG]{I|L}TV 9 0 + 48.164 0.0 0.0 5.1761 5.1761 83.656 0.0 0.0 0.0 9.224309029657292 34.38679565687082 9.224309029657292 10.339322000954276 0 1.305462187404089 1.5228787452803376 0.3494850021680094 0.3252574989159953 + + {[DA]|[EG]}[R{I|L}][SG]{I|L}TV;{[TV]|[{I|L}S]}AAR[DV]TV;{[QD]|[EN]|[WG]|[KD]|[RS]}VRWEV;{[QD]|[EN]|[WG]|[KD]|[RS]}VR[DV]TV;{[DA]|[EG]}[R{I|L}][KT]EV;[{I|L}T]QR[DV]TV;{[TV]|[{I|L}S]}AAR[VS]EV;{[SA]|[TG]}[{I|L}A]R[DV]TV;[{I|L}T]QR[VS]EV;[{I|L}T][AG]R[DV]TV 5.1761;4.065;3.9933;3.8514;3.6191;3.5685;3.2041;3.1795;2.7077;2.5731 +;-;-;-;-;-;-;-;-;- + 255 1 1.407 35065.7 1.0 6003 4673 10666 HBL1_DMSO_200M_050219_2,10678 HBL1_DMSO_200M_050219_2,10678,DALRSGLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10679 57.695 386.0 306770.0 25 0 55528.0 + 22184 LPQEFRERI 9 102 594.3303070030252 1186.6460610728502 2 594.3310424685478 MULTI CID FTMS 0 0 0 10666 321643.375 1.0 0 0.0 13 Unmodified _LPQEFRERI_ ENSG00000080839|ENST00000373664|RBL1;nc|ENSG00000080839|P28749-2|RBL1 26.020703789607367 0.2001090068861241 4 {I|L}{I|L}E 3 7 29.45 0.0 0.0 2.4818 0.0 0.0 0.0 828.4008977367654 828.4008977367654 7.393458002772874 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {I|L}{I|L}E 2.4818 - 88 + 1 1.407 91232.6 1.0 6004 4673 10666 HBL1_DMSO_200M_050219_2,10679 HBL1_DMSO_200M_050219_2,10679,LPQEFRERI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10680 57.697 88.0 636250.0 25 0 73784.0 8083 EPDTSVHTL 9 101 499.7443507746747 997.4741486161494 2 499.7433959841728 MULTI CID FTMS 0 0 0 10666 298626.9375 1.0 0 0.0 14 Unmodified _EPDTSVHTL_ ENSG00000170836|ENST00000305921|PPM1D;nc|ENSG00000170836|O15297-2|PPM1D 16.942295170755138 0.3780752226737986 4 HT{I|L} 3 6 15.782 0.0 0.0 1.5822 0.0 0.0 628.2717388034525 0.0 628.2717388034525 0.0 0.0969651760975427 0.0 0.0 0 0.0 0.0 0.5402877273156862 0.0 + HT{I|L} 1.5822 + + 171 + 1 1.407 49183.1 1.0 6005 4673 10666 HBL1_DMSO_200M_050219_2,10680 HBL1_DMSO_200M_050219_2,10680,EPDTSVHTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10681 57.704 396.0 385130.0 25 0 27261.0 + 29838 QQLPEIQRV 9 159 555.8167657183748 0 555.8163940310478 PEAK CID FTMS 0 0 0 10666 277480.09375 0.9335252874712444 -1 0.0800857543945312 15 Unmodified _QQLPEIQRV_ ENSG00000163214|ENST00000457308|DHX57 41.95555342248728 0.0536712386667488 4 {I|L}PE{I|L} 4 5 26.899 0.0 0.0 2.4242 0.0 0.0 256.11293243830056 398.2167452447876 654.3296776830881 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 + {I|L}PE{I|L} 2.4242 + + 141 + 1 1.407 117460.3 1.0 6006 4673 10666 HBL1_DMSO_200M_050219_2,10681 HBL1_DMSO_200M_050219_2,10681,QQLPEIQRV True True QQLPEIQRV 57.703622 555.816394031048 4177719.5 10666.0 ENSG00000163214|ENST00000457308|DHX57 6.162532011667888 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10682 57.711 428.0 252800.0 25 0 15696.0 + 29388 QLANEEIAQV 10 150 557.7905904818351 1113.5666280304702 2 558.2920410037041 MULTI CID FTMS 0 0 0 10666 211327.296875 0.6083519288092764 -2 0.1574211120605468 16 Unmodified _QLANEEIAQV_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484264.1_1_4:1746256-1746676:+|nuORF 51.629811660486645 0.0705852162080619 4 {NN|[MP]|[D{I|L}]|[EV]}A[VG][DN]{I|L} 8 8 27.668 0.0 0.0 2.4846 0.0 0.0 0.0 313.1528055537308 313.1528055537308 14.22583750530694 0.0 0.0 0.0 0 0.2887254899964357 0.6575773191777937 0.8807196863200843 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}A[VG][DN]{I|L} 2.4846 - 1065 1 1.407 84585.7 1.0 6007 4673 10666 HBL1_DMSO_200M_050219_2,10682 HBL1_DMSO_200M_050219_2,10682,QLANEEIAQV True True QLANEEIAQV 57.711247 558.292041003704 4708121.5 10666.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENST00000484264.1_1_4:1746256-1746676:+|nuORF 3.5798402229944863 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10683 57.72 492.0 295980.0 25 0 19341.0 + 1016 AGAEGFVRV 9 176 453.24606669056834 0 453.2453185915947 PEAK CID FTMS 0 0 0 10666 203103.359375 1.0 0 0.0 17 Unmodified _AGAEGFVRV_ ENSG00000109854|ENST00000451739|HTATIP2;nc|ENSG00000109854|Q9BUP3-3|HTATIP2 53.832793166522166 0.0232989711577274 4 GAEG{M(Oxidation (M))|F}V 6 3 37.414 0.0 0.0 4.1366 0.0 0.0 71.0368588676617 270.1570223443969 341.1938812120586 0.0 0.0 0.0 0.0 0 1.174742501084005 0.0 0.3807196863200844 0.0 + GAEG{M(Oxidation (M))|F}V 4.1366 + + 192 + 1 1.407 114565.3 1.0 6008 4673 10666 HBL1_DMSO_200M_050219_2,10683 HBL1_DMSO_200M_050219_2,10683,AGAEGFVRV True True AGAEGFVRV 57.719924 453.245318591595 1660530.375 10666.0 nc|ENSG00000109854|Q9BUP3-3|HTATIP2;;ENSG00000109854|ENST00000451739|HTATIP2 6.0086283683776855 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10685 57.724 1.9 29933000.0 25 0 3407300.0 + 44676 YPFKPPKV 8 65 488.2868778785377 974.5592028238756 2 488.2870056033134 MULTI CID FTMS 0 0 0 10684 28708892.0 0.9441385184576172 -1 0.0558853149414062 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 30.22481116460888 0.4082965392918993 4 YP{M(Oxidation (M))|F}KV 5 3 59.425 0.0 0.0 6.0976 0.0 0.0 0.0 337.18903528385005 337.18903528385005 37.028937514676485 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.0 0.0 YP{M(Oxidation (M))|F}KV 6.0976 - 139 + 1 1.384 47939.1 1.0 6009 4674 10684 HBL1_DMSO_200M_050219_2,10685 HBL1_DMSO_200M_050219_2,10685,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10686 57.725 14.0 3344300.0 25 0 468970.0 + 21222 LPDGRIIKV 9 76 337.55035122418985 1009.6292242727696 3 337.5500366091728 MULTI CID FTMS 0 0 0 10684 3332180.5 0.0503145591877048 6 -0.6852340698242188 2 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 30.7034409873982 0.1405282614900322 4 {I|L}V{[ET]|[MV]}[KP]PKV 9 6 + 36.577 0.0 0.0 3.6228 3.6228 78.746 0.0 0.0 0.0 12.14764271519251 7.917112166456455 7.917112166456455 12.781512503836442 0 0.0 0.0 0.5 0.3494850021680094 {I|L}V{[ET]|[MV]}[KP]PKV;{I|L}[{I|L}T]R[PS]PKV 3.6228;2.3569 -;- 169 + 1 1.384 46121.2 1.0 6010 4674 10684 HBL1_DMSO_200M_050219_2,10686 HBL1_DMSO_200M_050219_2,10686,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10687 57.726 23.0 3278500.0 25 0 454820.0 + 21584 LPKNPDLRI 9 87 355.8855644675957 1064.6348640029871 3 355.8851806521416 MULTI CID FTMS 0 0 0 10684 2601382.75 0.9750012321587628 1 -0.1292839050292968 3 Unmodified _LPKNPDLRI_ ENSG00000163636|ENST00000295901|PSMD6;ENST00000475036.1_1_3:64008918-64009122:-|nuORF;nc|ENSG00000163636|Q15008-4|PSMD6 23.78978130925829 0.2284941198415988 4 {I|L}PKNPD{I|L}[R{I|L}] 9 0 + 72.841 0.0 0.0 6.8419 6.8419 88.899 0.0 0.0 0.0 55.66183773464459 5.642492736872597 5.642492736872597 9.208187539523747 0 0.0 1.3979400086720375 0.0 0.4247425010840047 + + {I|L}PKNPD{I|L}[R{I|L}];{I|L}PKGGPD{I|L}[R{I|L}];{I|L}PKN{I|L}[DP][R{I|L}];{I|L}PKYY{I|L}[R{I|L}];{I|L}PK{I|L}N[DP][R{I|L}];{I|L}PK{I|L}YY[R{I|L}];{I|L}PKGG{I|L}[DP][R{I|L}];{I|L}P{I|L}KN[DP][R{I|L}];{I|L}PK{I|L}GG[DP][R{I|L}];{I|L}P{I|L}KYY[R{I|L}] 6.8419;5.977;4.7979;4.7549;4.5152;4.4722;3.933;3.668;3.6502;3.6251 +;-;-;-;-;-;-;-;-;- + 310 + 1 1.384 71027.6 1.0 6011 4674 10684 HBL1_DMSO_200M_050219_2,10687 HBL1_DMSO_200M_050219_2,10687,LPKNPDLRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10688 57.728 21.0 2637300.0 25 0 279300.0 + 8233 EPYPEVSRI 9 71 545.2824479364269 1088.5503429396538 2 545.2826415896416 MULTI CID FTMS 0 0 0 10684 1319999.25 0.6246581828257234 -5 0.2970161437988281 4 Unmodified _EPYPEVSRI_ ENSG00000165643|ENST00000425225|SOHLH1;nc|ENSG00000165643|Q5JUK2|SOHLH1 34.221707139014875 0.1071766711162635 4 [EP]YPEV 6 3 54.143 0.0 0.0 4.9739 0.0 0.0 0.0 371.2052381903135 371.2052381903135 43.68562527100117 0.0 0.0 0.0 0 0.8494850021680094 1.3979400086720375 0.3252574989159953 0.0 + [EP]YPEV 4.9739 + + 118 + 1 1.384 51223.9 1.0 6012 4674 10684 HBL1_DMSO_200M_050219_2,10688 HBL1_DMSO_200M_050219_2,10688,EPYPEVSRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10689 57.729 48.0 1369200.0 25 0 142110.0 + 22183 LPQEFRERI 9 66 396.55598360911074 1186.6461214275323 3 396.5557433962822 MULTI CID FTMS 0 0 0 10684 878356.75 0.7867711760553248 1 -0.1292839050292968 5 Unmodified _LPQEFRERI_ ENSG00000080839|ENST00000373664|RBL1;nc|ENSG00000080839|P28749-2|RBL1 14.218169984304629 0.4518140821082705 4 {I|L}PQE[R{M(Oxidation (M))|F}]E{I|L}R 9 2 + 51.23 0.0 0.0 4.3173 4.3173 78.817 0.0 0.0 0.0 30.2883627084588 2.3418248469008134 2.3418248469008134 9.208187539523747 0 0.0 1.5228787452803376 0.0 0.7742275032520141 {I|L}PQE[R{M(Oxidation (M))|F}]E{I|L}R;{I|L}P[AG]E[R{M(Oxidation (M))|F}]E{I|L}R 4.3173;3.5413 -;- 117 + 1 1.384 58459.9 1.0 6013 4674 10684 HBL1_DMSO_200M_050219_2,10689 HBL1_DMSO_200M_050219_2,10689,LPQEFRERI False True LPQEFRERI 57.72885 396.555743396282 13559666.75 10684.0 ENSG00000080839|ENST00000373664|RBL1;;nc|ENSG00000080839|P28749-2|RBL1 3.7725210984547934 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10690 57.735 360.0 507470.0 25 0 58820.0 + + 43272 LPPGAMAAV 9 101 826.4459519991036 1650.8773510650071 2 826.4474365115166 MULTI CID FTMS 0 0 0 10684 581380.4375 0.700492802846405 4 -0.4628334045410156 6 Unmodified _WGRLWWHRWLR_ ENSG00000169710|ENST00000306749|FASN 0.0 0.8751479354844584 4 [{I|L}P]PQMA{M(Oxidation (M))|F}T{I|L} 9 -1 55.856 0.0 0.0 3.3834 0.0 0.0 0.0 649.377394416781 649.377394416781 31.77825934852436 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.6549471895720984 [{I|L}P]PQMA{M(Oxidation (M))|F}T{I|L} 3.3834 - 2582 1 1.384 127617.1 1.0 6014 4674 10684 HBL1_DMSO_200M_050219_2,10690 HBL1_DMSO_200M_050219_2,10690,WGRLWWHRWLR False False LPPGAMAAV 57.735359 826.447436511517 25748138.0 10684.0 ENSG00000169710|ENST00000306749|FASN 6.97398026784261 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10691 57.741 335.0 1177100.0 25 0 44179.0 + -1 GEECLHDPV 9 175 528.2268002941441 1054.4390476550882 2 528.2270995974541 MULTI CID FTMS 0 0 0 10684 531789.0625 0.2411370232183045 2 -0.2102279663085937 7 Carbamidomethyl (C) _GEEC(Carbamidomethyl (C))LHDPV_ REV__ENSG00000164509|ENST00000652347|IL31RA;REV__nc|ENSG00000164509|Q8NI17-12|IL31RA;REV__nc|ENSG00000164509|Q8NI17-6|IL31RA;REV__nc|ENSG00000164509|Q8NI17|IL31RA 25.399314129420983 0.2080152500878129 4 {I|L}THD{I|L} 5 -1 36.89 0.0 0.0 3.4986 0.0 0.0 0.0 472.1160677545532 472.1160677545532 9.158384809981946 0.0 0.0 0.0 0 0.5994850021680094 0.6777807052660807 0.7742275032520141 0.0 {I|L}THD{I|L} 3.4986 - 1566 + 1 1.384 297635.3 1.0 6015 4674 10684 HBL1_DMSO_200M_050219_2,10691 HBL1_DMSO_200M_050219_2,10691,GEECLHDPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10692 57.744 147.0 687090.0 25 0 43132.0 + 21585 LPKNPDLRI 9 111 533.3248413491684 1064.6351297651368 2 533.3260986208916 MULTI CID FTMS 0 0 0 10684 390006.28125 0.879719658725022 1 -0.1292839050292968 8 Unmodified _LPKNPDLRI_ ENSG00000163636|ENST00000295901|PSMD6;ENST00000475036.1_1_3:64008918-64009122:-|nuORF;nc|ENSG00000163636|Q15008-4|PSMD6 40.23920728925047 0.0741434193262949 4 {I|L}PKN[DP]{I|L}R{I|L} 9 0 + 80.729 0.0 0.0 7.5827 7.5827 90.963 0.0 0.0 0.0 62.82695561707737 10.457574905606748 10.457574905606748 9.208187539523747 0 1.6861818737241734 1.5228787452803376 0.0 0.3054621874040891 + + {I|L}PKN[DP]{I|L}R{I|L};{I|L}PKGG[DP]{I|L}R{I|L};{I|L}P{I|L}E[DP]{I|L}R{I|L};{I|L}PKYY{I|L}R{I|L};{I|L}PK{I|L}YYR{I|L};{I|L}PKHH{I|L}{I|L}[HA];{I|L}PK{I|L}HH{I|L}[HA];{I|L}PKHH{I|L}[HA]{I|L};{I|L}PK{I|L}HH[HA]{I|L};{I|L}P{I|L}KYYR{I|L} 7.5827;6.7178;6.6555;6.5046;5.8229;5.5358;5.468;5.1356;5.0679;4.8956 +;-;-;-;-;-;-;-;-;- + 864 + 1 1.384 83479.3 1.0 6016 4674 10684 HBL1_DMSO_200M_050219_2,10692 HBL1_DMSO_200M_050219_2,10692,LPKNPDLRI True True LPKNPDLRI 57.744377 533.3259 52041145.0 10684.0 nc|ENSG00000163636|Q15008-4|PSMD6;;ENSG00000163636|ENST00000295901|PSMD6;;ENST00000475036.1_1_3:64008918-64009122:-|nuORF 4.75771967569987 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10693 57.752 445.0 454110.0 25 0 34526.0 + 37034 GTVDDVPKL 9 170 472.2602389801753 942.5059250271504 2 472.2603027224541 MULTI CID FTMS 0 0 0 10684 347495.375 0.7500396271713835 -1 0.0558853149414062 9 Unmodified _TGALEGVPIS_ ENSG00000110917|ENST00000228506|MLEC 29.081581746732265 0.3152867722954398 4 AA{I|L}C{I|L}DPK{I|L} 9 7 + 50.426 0.0 0.0 5.3502 5.3502 73.34 0.0 0.0 0.0 18.801639945973605 4.710960721176974 4.710960721176974 2.188105454342804 0 0.0 1.3979400086720375 0.2887254899964357 0.0 AA{I|L}C{I|L}DPK{I|L};{[SA]|[TG]}VDVDPK{I|L};{[SA]|[TG]}AE{I|L}DPK{I|L};AA{I|L}CEVPK{I|L};AA{I|L}C{I|L}D{I|L}[KP];AATEVDPK{I|L};{[SA]|[TG]}VDDVPK{I|L};{[SA]|[TG]}VDVD{I|L}[KP];{[SA]|[TG]}AEEVPK{I|L};{[SA]|[TG]}AE{I|L}D{I|L}[KP] 5.3502;5.118;4.425;4.4051;4.3469;4.2427;4.1729;4.1147;3.4798;3.4216 -;-;-;-;-;-;-;-;-;- 1843 + 1 1.384 154451.0 1.0 6017 4674 10684 HBL1_DMSO_200M_050219_2,10693 HBL1_DMSO_200M_050219_2,10693,TGALEGVPIS False False GTVDDVPKL 57.752278 472.260302722454 3167179.5 10684.0 ENSG00000110917|ENST00000228506|MLEC 1.1630219866832097 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10694 57.761 479.0 427250.0 25 0 56591.0 + 26816 PAPPPPPVL 9 175 442.7662434121444 883.5179338910888 2 442.7657348513603 MULTI CID FTMS 0 0 0 10684 308049.6875 0.4630576170415297 5 -0.572418212890625 10 Unmodified _PAPPPPPVL_ ENSG00000114790|ENST00000465093|ARHGEF26;nc|ENSG00000114790|Q96DR7-3|ARHGEF26;nc|ENSG00000114790|Q96DR7-4|ARHGEF26 56.04830969593885 0.0282699710924866 4 [PA]PPPP 6 3 40.767 0.0 0.0 4.6142 0.0 0.0 0.0 324.1930198081761 324.1930198081761 16.944925830095556 0.0 0.0 0.0 0 1.4604093769761874 1.3979400086720375 0.0 0.0 + [PA]PPPP 4.6142 + + 750 1 1.384 159831.0 1.0 6018 4674 10684 HBL1_DMSO_200M_050219_2,10694 HBL1_DMSO_200M_050219_2,10694,PAPPPPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10695 57.77 515.0 340520.0 25 0 74802.0 + 44502 YPASTVQI 8 143 439.73499508234266 877.4554372314853 2 439.7340576052666 MULTI CID FTMS 0 0 0 10684 237782.0 0.7286405290244885 2 -0.2102279663085937 11 Unmodified _YPASTVQI_ ENSG00000101361|ENST00000329276|NOP56;ENST00000480992.5_1_20:2635438-2636687:+|nuORF;ENST00000484998.5_1_20:2635830-2636687:+|nuORF 36.46614268402704 0.2934124525509074 4 [AG]{I|L}DYVQ{I|L} 8 5 + 26.188 0.0 0.0 2.9845 2.9845 65.817 0.0 0.0 0.0 2.509610949844568 6.322101292266595 2.509610949844568 2.509610949844568 0 0.2742275032520141 1.2218487496163564 1.1549471895720984 0.0 [AG]{I|L}DYVQ{I|L};{[QN]|[E{I|L}]|[KN]}NYVQ{I|L};[Q{I|L}]DYVQ{I|L};[AG]VEYVQ{I|L};[AG]{I|L}VDYQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VQ{I|L};[Q{I|L}]VDYQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{[MG]|[TS]}VQ{I|L};{[QN]|[E{I|L}]|[KN]}NVYQ{I|L};[PA]STYVQ{I|L} 2.9845;2.6985;2.4457;2.3788;2.336;2.2678;2.1453;2.1115;2.1032;2.0623 -;-;-;-;-;-;-;+;-;- + 557 1 1.384 137609.8 1.0 6019 4674 10684 HBL1_DMSO_200M_050219_2,10695 HBL1_DMSO_200M_050219_2,10695,YPASTVQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10696 57.779 533.0 248310.0 25 0 38735.0 -1 0 92 909.4120891876706 1816.8096254421407 2 909.4132568240166 MULTI CID FTMS 0 0 0 10684 222992.078125 1.0 0 0.0 12 4 EW{I|L}TTV 6 -1 16.754 0.0 0.0 0.92215 0.0 0.0 818.2956243273427 266.1146639459594 1084.410288273302 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EW{I|L}TTV 0.92215 - 183 + 1 1.384 93388.6 1.0 6020 4674 10684 HBL1_DMSO_200M_050219_2,10696 HBL1_DMSO_200M_050219_2,10696, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10697 57.788 488.0 171100.0 25 0 7589.7 + 26484 NTPEYMEKI 9 130 562.7682568165494 1123.5219606998987 2 562.7676879763603 MULTI CID FTMS 0 0 0 10684 194020.640625 0.0835206765940232 5 -0.572418212890625 13 Unmodified _NTPEYMEKI_ ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2 28.49450938151212 0.1686335738423394 4 {[QS]|[NT]}PEYMEK{I|L} 9 0 + 46.227 0.0 0.0 4.1144 4.1144 76.581 0.0 0.0 0.0 23.41808628637089 3.7916495073967127 3.7916495073967127 8.636248758149193 0 0.4247425010840047 2.0 0.6549471895720984 0.0 + + {[QS]|[NT]}PEYMEK{I|L};{[QS]|[NT]}P{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[WM]{I|L};{[QS]|[NT]}P{[{M(Oxidation (M))|F}C]|[YS]}[RK]C(Carbamidomethyl (C))V;{[QS]|[NT]}[YN]ER{I|L}TN;{[QS]|[NT]}P[HM]{I|L}[HA]{[CT]|[{M(Oxidation (M))|F}G]};{[QS]|[NT]}[YN]E[VG]{I|L}TN;[EP]Y[MT][VG]{I|L}TN;[AG]S[YN]ER{I|L}TN;[YQ][NS]ER{I|L}TN;[AG]Y[NS]ER{I|L}TN 4.1144;3.3458;2.9653;2.8388;2.2372;2.0192;1.2011;0.98817;0.88156;0.81108 +;-;-;-;-;-;-;-;-;- + 496 + 1 1.384 69200.2 1.0 6021 4674 10684 HBL1_DMSO_200M_050219_2,10697 HBL1_DMSO_200M_050219_2,10697,NTPEYMEKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10698 57.8 614.0 280780.0 25 0 30347.0 + 15165 IPAVSIGSV 9 204 421.7515456767997 841.4885384203993 2 421.7515746951103 MULTI CID FTMS 0 0 0 10684 142469.015625 0.5880230415863978 4 -0.4628334045410156 14 Unmodified _IPAVSIGSV_ REV__ENST00000545260.5_2_10:34398874-34399204:-|nuORF 15.847184025352805 0.4077185912009129 4 {I|L}PW{I|L}[WK] 6 -1 + 32.211 0.0 0.0 3.8279 3.8279 69.637 0.0 0.0 0.0 11.753544303566514 1.47817481888638 1.47817481888638 3.222192947339196 0 0.1923877696554315 0.8860566476931632 0.0 0.0 {I|L}PW{I|L}[WK];{I|L}PW[WK]{I|L};{I|L}PA{I|L}{I|L}[C(Carbamidomethyl (C))R];{I|L}P[VS]S{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{I|L}P[VS][QT]VV;[WP]{I|L}{I|L}[WK];[WP]{I|L}[WK]{I|L};[PS]V{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[PS]V{I|L}[QT]VV 3.8279;3.445;1.8989;1.8497;1.7886;1.5064;1.1235;0.90652;0.84548 -;-;-;-;-;-;-;-;- 173 + 1 1.384 138350.8 1.0 6022 4674 10684 HBL1_DMSO_200M_050219_2,10698 HBL1_DMSO_200M_050219_2,10698,IPAVSIGSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10699 57.812 681.0 479750.0 25 0 57429.0 + 12615 GVISKVSTL 9 200 452.278870024079 902.543187114958 2 452.2794677615166 MULTI CID FTMS 0 0 0 10684 140731.09375 0.2796192693244952 -2 0.1359710693359375 15 Unmodified _GVISKVSTL_ ENSG00000092148|ENST00000399332|HECTD1 39.94969957227396 0.0757326808254658 4 R{I|L}G[YV]VSG 8 7 51.848 0.0 0.0 5.7447 0.0 0.0 0.0 68.0514391534789 68.0514391534789 8.088974812976886 0.0 0.0 0.0 0 0.6694451763165201 0.0 1.1533306790097906 0.0 R{I|L}G[YV]VSG 5.7447 - 4251 + 1 1.384 246610.6 1.0 6023 4674 10684 HBL1_DMSO_200M_050219_2,10699 HBL1_DMSO_200M_050219_2,10699,GVISKVSTL True True GVISKVSTL 57.811556 452.279467761517 3558615.0 10684.0 ENSG00000092148|ENST00000399332|HECTD1 2.9253650108973184 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10700 57.825 800.0 113240.0 25 0 8549.0 + -1 VQAPVIQQV 9 105 981.9142630086524 1961.8139730841044 2 982.4149658083916 MULTI CID FTMS 0 0 0 10684 112657.5625 0.3194471015497656 8 -0.9029808044433594 16 ENST00000298173.7_1_14:81646569-81676264:-|nuORF;nc|ENSG00000165417|P52655-2|GTF2A1;ENSG00000165417|ENST00000553612|GTF2A1 4 [QP]S 3 -1 17.513 0.0 0.0 0.89272 0.0 0.0 0.0 1646.646589621467 1646.646589621467 6.728742201281991 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.3054621874040891 0.0 [QP]S 0.89272 - 1351 1 1.384 64253.4 0.9100000262260436 6024 4674 10684 HBL1_DMSO_200M_050219_2,10700 HBL1_DMSO_200M_050219_2,10700, False False VQAPVIQQV 57.825421 982.414965808392 215690.96875 10684.0 ENST00000298173.7_1_14:81646569-81676264:-|nuORF;;nc|ENSG00000165417|P52655-2|GTF2A1;;ENSG00000165417|ENST00000553612|GTF2A1 0.7054079671700796 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10701 57.838 657.0 277770.0 25 0 50442.0 + 31955 RVDPNGSRYLL 11 118 645.3513943247069 1288.6882357162135 2 645.3518554568291 MULTI CID FTMS 0 0 0 10684 117202.1171875 0.6044812179277084 -1 0.0558853149414062 17 Unmodified _RVDPNGSRYLL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 26.020703789607367 0.4812285719068541 4 [RV]D[KQ][KG]Y 8 6 23.79 0.0 0.0 1.8461 0.0 0.0 0.0 311.1048446990149 311.1048446990149 7.312215777050497 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.6861818737241735 0.6549471895720985 [RV]D[KQ][KG]Y 1.8461 - 383 1 1.384 134386.5 1.0 6025 4674 10684 HBL1_DMSO_200M_050219_2,10701 HBL1_DMSO_200M_050219_2,10701,RVDPNGSRYLL False True RVDPNGSRYLL 57.838044 645.351855456829 1400668.5 10684.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;;ENST00000545930.5_1_11:61082914-61091715:-|nuORF;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 3.3792949517567954 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10702 57.849 636.0 66698.0 25 0 3604.2 14245 IDYYGDILVK 10 87 599.8205444216728 0 599.8205444216728 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _IDYYGDILVK_ ENSG00000179397|ENST00000366534|CATSPERE;ENST00000473875.5_1_1:244724068-244773670:+|nuORF;nc|ENSG00000179397|Q5SY80-2|CATSPERE;nc|ENSG00000179397|Q5SY80-3|CATSPERE 3.5964929083625545 0.3961065659209837 4 {I|L} 1 9 5.4846 0.0 0.0 0.45795 0.0 0.0 743.3025135486206 338.2171724908813 1081.519686039502 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.45795 + + 8 + 1 1.384 34996.0 1.0 6026 4674 10684 HBL1_DMSO_200M_050219_2,10702 HBL1_DMSO_200M_050219_2,10702,IDYYGDILVK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10704 57.853 1.1 33293000.0 25 0 7193900.0 + 4464 DAYALNHTL 9 62 509.2535253747258 1016.4924978162516 2 509.2542297244072 MULTI CID FTMS 0 0 0 10703 38357136.0 0.1264326855347676 4 -0.4431343078613281 1 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 43.77239144664712 0.0547478964384323 4 {[DA]|[EG]}YA{I|L}N 6 3 56.401 0.0 0.0 5.5486 0.0 0.0 0.0 366.17917810611567 366.17917810611567 30.726825097560425 0.0 0.0 0.0 0 1.25 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YA{I|L}N 5.5486 + + 105 + 1 1.37 36484.7 1.0 6027 4675 10703 HBL1_DMSO_200M_050219_2,10704 HBL1_DMSO_200M_050219_2,10704,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10705 57.854 6.0 5898200.0 25 0 442790.0 + 29717 QPLATYTTV 9 74 497.2662370504306 992.5179211676613 2 497.2664062380791 MULTI CID FTMS 0 0 0 10703 8295003.5 1.0 0 0.0 2 Unmodified _QPLATYTTV_ chr11:111357710-111357799|28|11.0|0.36|4.95|-|0|POU2AF1,None|1;ENSG00000110777|ENST00000393067|POU2AF1 26.88365393820708 0.1891292719743517 4 TYQA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 6 8 30.138 0.0 0.0 3.0365 0.0 0.0 236.1351219506675 0.0 236.1351219506675 0.0 1.6946999598069823 0.0 0.0 0 0.0 0.0 0.5 0.4247425010840047 TYQA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.0365 - 265 + 1 1.37 32716.7 1.0 6028 4675 10703 HBL1_DMSO_200M_050219_2,10705 HBL1_DMSO_200M_050219_2,10705,QPLATYTTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10706 57.856 9.8 5382200.0 25 0 406780.0 + 42086 VQYNEPLKV 9 79 545.3014817299004 1088.588410526601 2 545.3017455935478 MULTI CID FTMS 0 0 0 10703 2551646.75 0.620056727735846 -1 0.1292839050292968 3 Unmodified _VQYNEPLKV_ ENSG00000148843|ENST00000369797|PDCD11 21.53697664764585 0.2571576504437394 4 VQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}[{I|L}P]KV 9 3 + 35.209 0.0 0.0 3.2344 3.2344 80.199 0.0 0.0 0.0 20.68405233458418 0.8232913608582919 0.8232913608582919 35.20876656998635 0 0.8494850021680094 0.0 0.0 0.5 VQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}[{I|L}P]KV 3.2344 - 115 + 1 1.37 47453.7 1.0 6029 4675 10703 HBL1_DMSO_200M_050219_2,10706 HBL1_DMSO_200M_050219_2,10706,VQYNEPLKV False True VQYNEPLKV 57.85567 545.301745593548 45349072.0 10703.0 ENSG00000148843|ENST00000369797|PDCD11 4.39401125907898 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10707 57.857 44.0 1725100.0 25 0 239550.0 + 13941 HYIIAARAL 9 71 514.3057172271699 1026.5968815211395 2 514.3064453005791 MULTI CID FTMS 0 0 0 10703 1407487.0 1.0 0 0.0 4 Unmodified _HYIIAARAL_ ENSG00000100029|ENST00000354694|PES1;nc|ENSG00000100029|O00541-2|PES1 31.26834338654808 0.1333407332142048 4 HY{I|L}{I|L}A 5 4 65.063 0.0 0.0 6.3377 0.0 0.0 0.0 426.24863611392817 426.24863611392817 50.88168156311241 0.0 0.0 0.0 0 1.25 1.6989700043360187 0.0 0.0 + HY{I|L}{I|L}A 6.3377 + + 53 + 1 1.37 63696.8 1.0 6030 4675 10703 HBL1_DMSO_200M_050219_2,10707 HBL1_DMSO_200M_050219_2,10707,HYIIAARAL False True HYIIAARAL 57.856904 514.306445300579 25256298.0 10703.0 ENSG00000100029|ENST00000354694|PES1;;nc|ENSG00000100029|O00541-2|PES1 3.3106178840001426 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10708 57.858 33.0 1807800.0 25 0 226720.0 + 39051 TVVERLVKV 9 89 521.8343234626539 1041.6540939921076 2 521.8352538943291 MULTI CID FTMS 0 0 0 10703 1067568.625 0.9805993878651622 -1 0.1292839050292968 5 Unmodified _TVVERLVKV_ ENSG00000169180|ENST00000304658|XPO6;ENST00000562408.1_1_16:28128533-28137161:-|nuORF;nc|ENSG00000169180|Q96QU8-2|XPO6 43.77239144664712 0.0547478964384323 4 VTVE 4 7 58.972 0.0 0.0 5.6614 0.0 0.0 0.0 610.4036348932249 610.4036348932249 41.308422131034845 0.0 0.0 0.0 0 0.805462187404089 2.0 0.5 0.0 VTVE 5.6614 - 85 + 1 1.37 53238.5 1.0 6031 4675 10703 HBL1_DMSO_200M_050219_2,10708 HBL1_DMSO_200M_050219_2,10708,TVVERLVKV True True TVVERLVKV 57.858083 521.835253894329 8706448.0 10703.0 nc|ENSG00000169180|Q96QU8-2|XPO6;;ENSG00000169180|ENST00000304658|XPO6;;ENST00000562408.1_1_16:28128533-28137161:-|nuORF 3.9325106938680015 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10709 57.86 58.0 1360700.0 25 0 294770.0 + 19478 LFHLLSILV 9 74 352.22574079916853 1053.6553929977056 3 352.2254516482353 MULTI CID FTMS 0 0 0 10703 1002141.5 1.0 0 0.0 6 Unmodified _LFHLLSILV_ REV__ENST00000420503.1_1_1:22352034-22356862:+|nuORF 16.149105407346934 0.3995459350917656 4 [RP]{[ES]|[DT]|[{I|L}C]}{I|L}K{I|L} 7 -1 23.473 0.0 0.0 2.2277 0.0 0.0 0.0 227.14013168981128 227.14013168981128 4.889013155985538 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 [RP]{[ES]|[DT]|[{I|L}C]}{I|L}K{I|L} 2.2277 - 32 1 1.37 67051.6 1.0 6032 4675 10703 HBL1_DMSO_200M_050219_2,10709 HBL1_DMSO_200M_050219_2,10709,LFHLLSILV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10710 57.861 50.0 1138000.0 25 0 146650.0 + 12473 GVALAHAS 8 97 363.2014351352112 0 363.2016479372978 PEAK CID FTMS 0 0 0 10703 946941.125 0.8470242398614085 -2 0.1851692199707031 7 Unmodified _GVALAHAS_ REV__ENST00000297293.5_1_7:97834930-97835215:+|nuORF 5.760428011301431 0.5786759180849727 4 PP 2 -1 7.0783 0.0 0.0 0.97715 0.0 0.0 285.1080488631152 242.1516207330688 527.2596695961839 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.97715 - 14 + 1 1.37 56812.7 1.0 6033 4675 10703 HBL1_DMSO_200M_050219_2,10710 HBL1_DMSO_200M_050219_2,10710,GVALAHAS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10711 57.862 63.0 1142500.0 25 0 84752.0 + 30312 RAAEEFVNV 9 103 517.7663143182149 1033.5180757032297 2 517.7675048708916 MULTI CID FTMS 0 0 0 10703 620444.0625 0.7550888663335701 -1 0.1292839050292968 8 Unmodified _RAAEEFVNV_ ENSG00000132661|ENST00000254998|NXT1 24.99096001346401 0.2132109383330889 4 [DV]{[NV]|[RG]}E{M(Oxidation (M))|F}VNV 9 4 + 49.993 0.0 0.0 4.8372 4.8372 74.453 0.0 0.0 0.0 3.979400086720375 14.973024840566469 3.979400086720375 3.979400086720375 0 0.7134679910804405 0.9208187539523752 0.3807196863200844 0.0 [DV]{[NV]|[RG]}E{M(Oxidation (M))|F}VNV;{[DA]|[EG]}[Q{I|L}]E{M(Oxidation (M))|F}VNV;{[DA]|[EG]}{M(Oxidation (M))|F}[{I|L}A]WVNV;[DV]{[NV]|[RG]}E{M(Oxidation (M))|F}VGGV;{[DA]|[EG]}[Q{I|L}]E{M(Oxidation (M))|F}VGGV;[DV][R{M(Oxidation (M))|F}]{[DA]|[EG]}VNV;{[DA]|[EG]}{M(Oxidation (M))|F}[{I|L}A]WVGGV;{[DA]|[EG]}{M(Oxidation (M))|F}[{I|L}A]{[DA]|[EG]}VNV;{[NV]|[RG]}[DV]E{M(Oxidation (M))|F}VNV;{[SA]|[TG]}[YV]PWVNV 4.8372;4.4521;4.2818;3.9462;3.5612;3.4351;3.3908;3.3908;3.3637;2.9292 -;-;-;-;-;-;-;-;-;- 436 1 1.37 61664.9 1.0 6034 4675 10703 HBL1_DMSO_200M_050219_2,10711 HBL1_DMSO_200M_050219_2,10711,RAAEEFVNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10712 57.865 137.0 792370.0 25 0 62656.0 + 24930 MPPLNTQRI 9 113 535.2953243789532 1068.5760958247065 2 535.2952758669853 MULTI CID FTMS 0 0 0 10703 479211.34375 1.0 0 0.0 9 Unmodified _MPPLNTQRI_ nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078-8|MEF2A 32.78568957990786 0.1150597335874693 4 MPP{I|L}N 5 4 65.503 0.0 0.0 6.1299 0.0 0.0 0.0 513.2796114557249 513.2796114557249 39.30523450795789 0.0 0.0 0.0 0 0.5796896906561032 2.0 0.0 0.3252574989159953 + MPP{I|L}N 6.1299 + + 427 + 1 1.37 91668.7 1.0 6035 4675 10703 HBL1_DMSO_200M_050219_2,10712 HBL1_DMSO_200M_050219_2,10712,MPPLNTQRI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10713 57.868 158.0 547800.0 25 0 88514.0 + 14073 IAPETLRV 8 79 449.7712510332512 897.5279491333024 2 449.7714721560478 MULTI CID FTMS 0 0 0 10703 471719.6875 0.2752320459537232 2 -0.2389297485351562 10 Unmodified _IAPETLRV_ ENSG00000136824|ENST00000374793|SMC2;nc|ENSG00000136824|O95347-2|SMC2 32.30548876998284 0.3644845974844379 4 [{I|L}A]PET{I|L}RV 8 0 + 60.303 0.0 0.0 6.7188 6.7188 93.753 0.0 0.0 0.0 49.60200035004867 7.422750325201406 7.422750325201406 60.30307555600956 0 0.4247425010840047 2.0 0.7742275032520141 0.0 + + [{I|L}A]PET{I|L}RV 6.7188 + + 63 + 1 1.37 73379.5 1.0 6036 4675 10703 HBL1_DMSO_200M_050219_2,10713 HBL1_DMSO_200M_050219_2,10713,IAPETLRV False True IAPETLRV 57.868308 449.771472156048 21750398.0 10703.0 ENSG00000136824|ENST00000374793|SMC2;;nc|ENSG00000136824|O95347-2|SMC2 2.9837028980255127 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10714 57.871 156.0 425880.0 25 0 30448.0 + + 12334 SGSDALRSGLTV 12 105 581.8069743328235 1161.599395732447 2 581.8077880740166 MULTI CID FTMS 0 0 0 10703 431934.96875 0.4892563670247064 -1 0.1292839050292968 11 Unmodified _GSSAEKRDLIS_ nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4 45.739877483867886 0.1412225664835785 4 [SG]SDA{I|L}R{I|L}GSTV 12 -1 + 106.54 0.0 0.0 9.1721 9.1721 92.153 0.0 0.0 0.0 20.457574905606748 85.60070954997954 20.457574905606748 8.895840698003 0 3.079689690656103 1.3010299956639813 2.322682509756042 0.0 [SG]SDA{I|L}R{I|L}GSTV;[SG]SDA{I|L}R[SG]{I|L}TV;[SG]SDA{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;[SG]EGS{I|L}R{I|L}GSTV;[SG]SDA{I|L}R[KT]EV;[SG]EGS{I|L}R[SG]{I|L}TV;[SG]EG[R{I|L}]S{I|L}GSTV;[SG]E[R{I|L}]GS{I|L}GSTV;[SG]EGS{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;[SG]{I|L}{[RE]|[WV]}GS{I|L}GSTV 9.1721;8.4063;7.8332;7.1863;7.1057;6.4205;6.0932;5.8839;5.8475;5.6747 -;-;-;-;-;-;-;-;-;- 1495 1 1.37 57207.5 1.0 6037 4675 10703 HBL1_DMSO_200M_050219_2,10714 HBL1_DMSO_200M_050219_2,10714,GSSAEKRDLIS False False SGSDALRSGLTV 57.871406 581.807788074017 12663169.0 10703.0 nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 7.736893018086751 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10715 57.88 483.0 435100.0 25 0 56150.0 41381 VPKTPVEI 8 159 441.7683182352048 881.5220835372097 2 441.7683288455009 MULTI CID FTMS 0 0 0 10703 393367.34375 0.4413694120696336 -29 2.4395523071289062 12 Unmodified _VPKTPVEI_ ENST00000529587.1_1_11:9806704-9806878:-|nuORF 42.09456458481378 0.1992492688217789 4 VPE 3 5 50.846 0.0 0.0 5.768 0.0 0.0 0.0 553.3206881158811 553.3206881158811 31.11642161387976 0.0 0.0 0.0 0 0.5114393726401688 1.6989700043360187 0.7059771852360797 0.0 VPE 5.768 - 1034 + 1 1.37 162384.2 1.0 6038 4675 10703 HBL1_DMSO_200M_050219_2,10715 HBL1_DMSO_200M_050219_2,10715,VPKTPVEI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10716 57.888 462.0 510440.0 25 0 76931.0 + 6057 DSFSEPRI 8 154 475.73239289451095 949.450232855822 2 475.7326232790947 MULTI CID FTMS 0 0 0 10703 372272.96875 0.7660436601226661 -1 0.1292839050292968 13 Unmodified _DSFSEPRI_ ENSG00000047230|ENST00000359276|CTPS2 61.357469665136826 0.1155423183535659 4 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}SE{I|L}RP 8 2 + 51.97 0.0 0.0 5.4737 5.4737 78.083 0.0 0.0 0.0 6.989700043360188 4.61441050434501 4.61441050434501 4.61441050434501 0 0.6747425010840047 0.0 0.6989700043360187 0.3807196863200844 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}SE{I|L}RP;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}SEPR{I|L};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}S{I|L}ERP;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}{I|L}SERP;{[DS]|[MA]|[CV]|TT}{I|L}{M(Oxidation (M))|F}SERP;{[DS]|[MA]|[CV]|TT}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}{I|L}RP;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}S{I|L}WPV;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}{I|L}SWPV;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}S{I|L}WVP;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}{I|L}SWVP 5.4737;4.9877;4.0194;3.666;2.6382;2.4993;2.4952;2.4305;2.2064;2.1418 -;+;-;-;-;-;-;-;-;- + 534 + 1 1.37 182471.2 1.0 6039 4675 10703 HBL1_DMSO_200M_050219_2,10716 HBL1_DMSO_200M_050219_2,10716,DSFSEPRI True True DSFSEPRI 57.888123 475.732623279095 4205479.5 10703.0 ENSG00000047230|ENST00000359276|CTPS2 4.694315592447917 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10717 57.896 449.0 590840.0 25 0 39977.0 + 15465 IPRESIKLV 9 170 527.834600433349 1053.654647933498 2 527.8344604372978 MULTI CID FTMS 0 0 0 10703 361659.375 0.8175831777550913 -1 0.1292839050292968 14 Unmodified _IPRESIKLV_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 49.52724829834842 0.0414064571532091 4 [{I|L}P]T[RD]{I|L}K{I|L}V 9 3 + 55.699 0.0 0.0 5.2862 5.2862 69.109 0.0 0.0 0.0 0.1156189942356817 15.667790332608568 0.1156189942356817 0.1156189942356817 0 1.325257498915995 1.0969100130080565 0.9258337024346172 0.2887254899964357 [{I|L}P]T[RD]{I|L}K{I|L}V;[TP]{I|L}[RD]{I|L}K{I|L}V;[{I|L}T]P[RD]{I|L}K{I|L}V;[{I|L}P]T[RD]K{I|L}{I|L}V;[TP]{I|L}[RD]K{I|L}{I|L}V;[{I|L}T]P[RD]K{I|L}{I|L}V;[{I|L}P]T[RD]{I|L}KV{I|L};[TP]{I|L}[RD]{I|L}KV{I|L};[{I|L}T]P[RD]{I|L}KV{I|L};[{I|L}P]T[RD]K{I|L}V{I|L} 5.2862;5.2753;5.2618;4.0129;4.0019;3.9884;3.5502;3.5392;3.5258;2.2768 -;-;-;-;-;-;-;-;-;- 410 1 1.37 207154.4 1.0 6040 4675 10703 HBL1_DMSO_200M_050219_2,10717 HBL1_DMSO_200M_050219_2,10717,IPRESIKLV True True IPRESIKLV 57.896098 527.834460437298 3284140.5 10703.0 nc|ENSG00000254087|P07948-2|LYN;;ENSG00000254087|ENST00000519728|LYN 1.1009111404418943 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10718 57.904 453.0 591220.0 25 0 84656.0 + 45929 YYYDGDVGNY 10 151 614.7432829436176 1227.472012954035 2 614.7438842654228 MULTI CID FTMS 0 0 0 10703 348472.25 0.1650363783825383 -2 0.1851692199707031 15 Unmodified _YYYDGDVGNY_ ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF 68.08070601005525 0.0189984391031388 4 YYDGDYVG[YN] 10 2 + 51.855 0.0 0.0 4.2245 4.2245 70.78 0.0 0.0 0.0 8.365743447727638 3.0423595621581256 3.0423595621581256 3.0423595621581256 0 0.6382104921644451 2.0 0.6421590589602533 0.0 YYDGDYVG[YN];YYDGDVGNYY;YYDGDVYG[YN];YYDGYDVG[YN];{[YD]|[{M(Oxidation (M))|F}M]}GDYYVG[YN];YYDGDVGY[YN];{[YD]|[{M(Oxidation (M))|F}M]}GDYYR[YN];YYDYGDVG[YN];YYYDGDVG[YN];{[YD]|[{M(Oxidation (M))|F}M]}GDYVGNYY 4.2245;3.9767;3.9144;3.5683;3.543;3.4862;3.44;3.3231;3.3231;3.2951 -;-;-;-;-;-;-;-;+;- + 6240 1 1.37 194764.6 1.0 6041 4675 10703 HBL1_DMSO_200M_050219_2,10718 HBL1_DMSO_200M_050219_2,10718,YYYDGDVGNY True True YYYDGDVGNY 57.904147 614.743884265423 33548256.0 10703.0 ENST00000481281.5_1_1:32757770-32793222:+|nuORF;;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 6.20053752263387 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10719 57.909 238.0 348280.0 25 0 29759.0 + 5001 DGTTPLHI 8 133 427.22445789362513 852.4343628540503 2 427.2241088747978 MULTI CID FTMS 0 0 0 10703 355439.53125 0.502781416519975 2 -0.2389297485351562 16 Unmodified _DGTTPLHI_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 26.34127834903884 0.4900704351052977 4 TP{I|L}{I|L}H 5 5 22.362 0.0 0.0 2.6233 0.0 0.0 273.0970348284628 0.0 273.0970348284628 0.0 10.941929684183368 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 TP{I|L}{I|L}H 2.6233 - 104 + 1 1.37 68925.7 1.0 6042 4675 10703 HBL1_DMSO_200M_050219_2,10719 HBL1_DMSO_200M_050219_2,10719,DGTTPLHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10720 57.914 222.0 696160.0 25 0 107300.0 + 2949 AVHETLVAV 9 122 469.7690491115673 937.5235452899346 2 469.7686645388603 MULTI CID FTMS 0 0 0 10703 339463.9375 0.3233334385032691 -2 0.1851692199707031 17 Unmodified _AVHETLVAV_ ENSG00000141873|ENST00000269740|SLC39A3 81.86404211737425 0.017065112157077 4 {[VA]|[{I|L}G]}HET{I|L}VAV 9 0 + 84.988 0.0 0.0 9.0652 9.0652 91.795 0.0 0.0 0.0 15.26827312076145 14.973024840566469 14.973024840566469 8.45098040014257 0 0.7614393726401688 1.5228787452803376 1.2302046884880935 0.0 + + {[VA]|[{I|L}G]}HET{I|L}VAV;{[VA]|[{I|L}G]}HTE{I|L}VAV;{[YC]|[HE]}T{I|L}G{I|L}VAV;{[VA]|[{I|L}G]}HETV{I|L}AV;{[YC]|[HE]}VAT{I|L}VAV;{[YC]|[HE]}T{I|L}VAVAV;[HV]AET{I|L}VAV;{[YC]|[HE]}T{I|L}AVVAV;{[VA]|[{I|L}G]}HTEV{I|L}AV;[HV]EAT{I|L}VAV 9.0652;8.1638;7.4366;7.37;7.2062;6.9291;6.7272;6.608;6.4686;6.0851 +;-;-;-;-;-;-;-;-;- + 2417 1 1.37 121991.6 1.0 6043 4675 10703 HBL1_DMSO_200M_050219_2,10720 HBL1_DMSO_200M_050219_2,10720,AVHETLVAV True True AVHETLVAV 57.913949 469.76866453886 8378056.5 10703.0 ENSG00000141873|ENST00000269740|SLC39A3 5.992315769195557 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10721 57.918 241.0 744310.0 25 0 64502.0 + 18799 LAPVVKEI 8 155 434.77964415916114 867.5447353851223 2 434.7798339724541 MULTI CID FTMS 0 0 0 10703 314557.0 0.5418903183190232 -1 0.1292839050292968 18 Unmodified _LAPVTAAIL_ ENST00000512383.1_1_5:75964652-75969784:+|nuORF;nc|ENSG00000145703|Q13576-3|IQGAP2;ENSG00000140575|ENST00000268182|IQGAP1;nc|ENSG00000145703|Q13576-2|IQGAP2;ENSG00000145703|ENST00000274364|IQGAP2 28.486842064014134 0.1687311288560894 4 [{I|L}A]PVV 5 5 36.184 0.0 0.0 4.1709 0.0 0.0 0.0 385.2097586038675 385.2097586038675 1.2062907165159231 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 [{I|L}A]PVV 4.1709 - 355 + 1 1.37 138906.7 1.0 6044 4675 10703 HBL1_DMSO_200M_050219_2,10721 HBL1_DMSO_200M_050219_2,10721,LAPVTAAIL False False LAPVVKEI 57.918447 434.779833972454 3488845.75 10703.0 ENST00000512383.1_1_5:75964652-75969784:+|nuORF;;nc|ENSG00000145703|Q13576-3|IQGAP2;;ENSG00000140575|ENST00000268182|IQGAP1;;nc|ENSG00000145703|Q13576-2|IQGAP2;;ENSG00000145703|ENST00000274364|IQGAP2 4.07901684443156 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10722 57.92 85.0 694110.0 25 0 113820.0 + 44721 YPHEVPQI 8 94 491.7516789876725 981.488805042145 2 491.7522460818291 MULTI CID FTMS 0 0 0 10703 298976.03125 0.7611568379290164 2 -0.2389297485351562 19 Unmodified _YPHEVPQI_ ENSG00000163481|ENST00000295704|RNF25;ENST00000463188.5_1_2:219529923-219536693:-|nuORF 19.438996006549623 0.6237395211498085 4 {I|L} 1 7 15.485 0.0 0.0 1.5777 0.0 0.0 850.3936797753466 0.0 850.3936797753466 0.0 -7.158584579332512 -7.158584579332512 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5777 + + 262 + 1 1.37 50739.9 1.0 6045 4675 10703 HBL1_DMSO_200M_050219_2,10722 HBL1_DMSO_200M_050219_2,10722,YPHEVPQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10723 57.93 551.0 296780.0 25 0 15675.0 + 38296 TQFGGKRPFGV 11 145 597.3249145761489 1192.6352762190977 2 597.3250610232353 MULTI CID FTMS 0 0 0 10703 278776.40625 0.497288473688629 1 -0.0809440612792968 20 Unmodified _TQFGGKRPFGV_ ENSG00000041357|ENST00000044462|PSMA4;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4 43.9818466556824 0.1510575460884947 4 TQ{M(Oxidation (M))|F}GAK{I|L}RSW 10 6 + 47.112 0.0 0.0 3.9503 3.9503 64.252 0.0 0.0 0.0 11.650531059138928 0.3047166798592187 0.3047166798592187 0.3047166798592187 0 0.5 0.6575773191777937 0.0 0.4247425010840047 TQ{M(Oxidation (M))|F}GAK{I|L}RSW;TQ{M(Oxidation (M))|F}GAK[WR]TV;TQ{M(Oxidation (M))|F}GAK{I|L}[QT]TV;TQ{M(Oxidation (M))|F}QK{I|L}RSW;TQ{M(Oxidation (M))|F}QK[WR]TV;TQ{M(Oxidation (M))|F}QK{I|L}[QT]TV;TQ{M(Oxidation (M))|F}GAKVVASW;TQ{M(Oxidation (M))|F}GAK{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}GV;TQ{M(Oxidation (M))|F}GGKR[{I|L}T]W;TQ{M(Oxidation (M))|F}GGK[{I|L}V]ASW 3.9503;3.9247;3.7675;3.655;3.6294;3.4685;3.3044;3.2958;3.2867;3.2482 -;-;-;-;-;-;-;-;-;- 2512 + 1 1.37 121598.6 1.0 6046 4675 10703 HBL1_DMSO_200M_050219_2,10723 HBL1_DMSO_200M_050219_2,10723,TQFGGKRPFGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10725 57.934 0.76 87875000.0 25 0 17889000.0 + 44666 YPFKPPKV 8 68 325.86056900573425 974.5598776174028 3 325.8604919314384 MULTI CID FTMS 0 0 0 10724 60477784.0 0.9372458084763476 1 -0.1579856872558593 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 42.275 0.0 0.0 4.3378 4.3378 75.96 0.0 0.0 0.0 16.52427340857887 6.295485955775497 6.295485955775497 6.709412807357751 0 0.2614393726401688 0.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;YP{M(Oxidation (M))|F}KPV[KP];YP{M(Oxidation (M))|F}KVP[KP];[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};Y[{I|L}T][KP]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.3378;3.6494;3.4687;1.4877;1.0912;0.60167 +;-;-;-;-;- + 221 + 1 1.37 61489.0 1.0 6047 4676 10724 HBL1_DMSO_200M_050219_2,10725 HBL1_DMSO_200M_050219_2,10725,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10726 57.935 12.0 4016300.0 25 0 710300.0 + 31528 RQIEYEYKL 9 50 621.3298826380179 1240.6452123428355 2 621.3301879763603 MULTI CID FTMS 0 0 0 10724 3937160.25 0.6578696817716276 1 -0.1579856872558593 2 Unmodified _RQIEYEYKL_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1;ENST00000504788.5_1_5:126112928-126171953:+|nuORF 19.361941925380144 0.3125782356748823 4 YEYE 4 6 29.68 0.0 0.0 2.3923 0.0 0.0 259.18916658528275 394.2212008111938 653.4103673964765 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 YEYE 2.3923 - 31 + 1 1.37 44416.0 1.0 6048 4676 10724 HBL1_DMSO_200M_050219_2,10726 HBL1_DMSO_200M_050219_2,10726,RQIEYEYKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10727 57.937 9.1 3629800.0 25 0 290310.0 + 6522 EALAAVRFAQ 10 70 538.2978194603375 1074.5810859874748 2 538.2980224490166 MULTI CID FTMS 0 0 0 10724 4686823.5 0.8067993175945596 1 -0.1579856872558593 3 Unmodified _EALAAVRFAQ_ REV__ENSG00000237412|ENST00000617714|PRSS56 10.073929032068715 0.6785112666868882 4 PYV 3 -1 26.198 0.0 0.0 2.438 0.0 0.0 0.0 712.3646334283811 712.3646334283811 14.604093769761874 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PYV 2.438 - 47 + 1 1.37 30425.3 1.0 6049 4676 10724 HBL1_DMSO_200M_050219_2,10727 HBL1_DMSO_200M_050219_2,10727,EALAAVRFAQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10728 57.938 23.0 2362400.0 25 0 528880.0 -1 0 68 318.19664923749616 634.3787455417923 2 318.1963989138603 MULTI CID FTMS 0 0 0 10724 2555062.5 0.214471881157784 4 -0.475006103515625 4 4 E 1 -1 3.0989 0.0 0.0 0.4885 0.0 0.0 317.2382900584645 185.0827730768188 502.3210631352832 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.4885 - 4 + 1 1.37 48431.0 1.0 6050 4676 10724 HBL1_DMSO_200M_050219_2,10728 HBL1_DMSO_200M_050219_2,10728, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10729 57.939 46.0 1126500.0 25 0 86941.0 + 21751 LPMGSIKNV 9 94 479.77317650672495 957.53180008025 2 479.7733642458916 MULTI CID FTMS 0 0 0 10724 1118730.375 0.6641972197181424 -1 0.0809440612792968 5 Unmodified _LPMGSIKNV_ ENSG00000103353|ENST00000395878|UBFD1;ENST00000563366.5_1_16:23573052-23581908:+|nuORF;ENST00000603335.1_1_4:78033720-78034596:-|nuORF 41.8396318013385 0.0653578398400075 4 {I|L}PM 3 6 48.188 0.0 0.0 5.0325 0.0 0.0 0.0 613.3356417291624 613.3356417291624 20.02697515943353 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}PM 5.0325 + + 284 + 1 1.37 46109.6 1.0 6051 4676 10724 HBL1_DMSO_200M_050219_2,10729 HBL1_DMSO_200M_050219_2,10729,LPMGSIKNV True True LPMGSIKNV 57.939047 479.773364245892 29375822.0 10724.0 ENST00000603335.1_1_4:78033720-78034596:-|nuORF;;ENSG00000103353|ENST00000395878|UBFD1;;ENST00000563366.5_1_16:23573052-23581908:+|nuORF 6.200139840443929 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10730 57.941 75.0 1584500.0 25 0 329020.0 + 13549 HPFHVIRI 8 99 340.2030500220915 1017.5873206664744 3 340.2028076052666 MULTI CID FTMS 0 0 0 10724 664698.25 0.2698823570491674 -1 0.0809440612792968 6 Unmodified _HPFHVIRI_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000482732.1_1_X:153628091-153628283:+|nuORF;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 44.40701690623563 0.1655546087385432 4 HP{M(Oxidation (M))|F}HV{I|L}{I|L}R 8 2 + 68.019 0.0 0.0 6.6844 6.6844 75.089 0.0 0.0 0.0 33.070852283487454 14.63660567114374 14.63660567114374 0.3615050083648299 0 1.3441876774005248 0.0 0.0 0.2742275032520141 HP{M(Oxidation (M))|F}HV{I|L}{I|L}R;{I|L}HMHV{I|L}{I|L}R;H{I|L}MHV{I|L}{I|L}R;HP{M(Oxidation (M))|F}H{I|L}V{I|L}R;{I|L}HMH{I|L}V{I|L}R;H{I|L}MH{I|L}V{I|L}R;HP{M(Oxidation (M))|F}{I|L}HV{I|L}R;{I|L}HM{I|L}HV{I|L}R;H{I|L}M{I|L}HV{I|L}R;HP{I|L}{M(Oxidation (M))|F}HV{I|L}R 6.6844;6.6488;6.5628;5.9197;5.8841;5.7981;5.2497;5.2142;5.1281;4.6342 -;-;-;-;-;-;-;-;-;- 190 + 1 1.37 102668.7 1.0 6052 4676 10724 HBL1_DMSO_200M_050219_2,10730 HBL1_DMSO_200M_050219_2,10730,HPFHVIRI False True HPFHVIRI 57.940785 340.202807605267 40846788.0 10724.0 ENST00000482732.1_1_X:153628091-153628283:+|nuORF;;ENSG00000165496|ENST00000298283|RPL10L;;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;;ENSG00000147403|ENST00000369817|RPL10;;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 5.014720439910889 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10731 57.943 95.0 829060.0 25 0 74961.0 + 3314 AYLEAHETF 9 114 540.7534775417986 1079.492402150397 2 540.7536498904228 MULTI CID FTMS 0 0 0 10724 432209.46875 0.1963714641302802 -1 0.0809440612792968 7 Unmodified _AYLEAHETF_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107 53.57557251787612 0.0325303259649373 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}E[MT]HC{I|L} 9 5 + 42.009 0.0 0.0 3.8915 3.8915 71.373 0.0 0.0 0.0 25.55516236474446 0.189549981487076 0.189549981487076 4.252509456924827 0 0.3252574989159953 2.0 0.6237125054200234 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}E[MT]HC{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}WS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[MT]T{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}DHP{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[MT]{I|L}T{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H[HA]T{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[MT]T{I|L}{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}DHM{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[WY]{M(Oxidation (M))|F} 3.8915;3.4976;3.233;3.1914;3.0935;3.045;2.9117;2.857;2.7968;2.7845 -;-;-;-;-;-;-;-;-;- 1567 + 1 1.37 63759.0 1.0 6053 4676 10724 HBL1_DMSO_200M_050219_2,10731 HBL1_DMSO_200M_050219_2,10731,AYLEAHETF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10732 57.954 607.0 263680.0 25 0 51475.0 -1 0 69 1126.4453153007007 3376.3141165023026 3 1127.111254870892 MULTI CID FTMS 0 0 0 10724 385588.59375 0.6159822959757881 -1 0.0809440612792968 8 4 T{I|L}TM 4 -1 21.23 0.0 0.0 0.62879 0.0 0.0 2355.826397851715 571.2175305022452 2927.04392835396 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 T{I|L}TM 0.62879 - 304 + 1 1.37 132565.4 1.0 6054 4676 10724 HBL1_DMSO_200M_050219_2,10732 HBL1_DMSO_200M_050219_2,10732, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10733 57.962 464.0 483000.0 25 0 84554.0 + 11032 GAYDGEEHLI 10 160 552.2536489321835 1102.492744931167 2 552.2536498904228 MULTI CID FTMS 0 0 0 10724 376539.375 0.4005368920124781 -1 0.0809440612792968 9 Unmodified _GAYDGEEHLI_ ENSG00000214107|ENST00000397548|MAGEB1 81.61307344734483 0.0157458389277943 4 [AG]YDGEEH{I|L}{I|L} 10 0 + 65.402 0.0 0.0 5.9322 5.9322 79.036 0.0 0.0 0.0 4.740253178969667 6.98970004336018 4.740253178969667 3.979400086720368 0 0.5941876774005248 1.6989700043360187 1.2396518287104437 0.0 + + [AG]YDGEEH{I|L}{I|L};[AG]YDDAEH{I|L}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}SS{I|L}DY{I|L}Q;{[YD]|[{M(Oxidation (M))|F}M]}SSD{I|L}Y{I|L}Q;[AG]YDGE[HN]K{I|L};[AG]YDG{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}T{I|L};{[YD]|[{M(Oxidation (M))|F}M]}SS{I|L}D{I|L}YQ;{[YD]|[{M(Oxidation (M))|F}M]}SSD{I|L}{I|L}YQ;{[YD]|[{M(Oxidation (M))|F}M]}SSDY{I|L}{I|L}Q;[AG]YDDA[HN]K{I|L} 5.9322;5.5713;4.8495;4.8136;4.5138;4.4972;4.4874;4.4515;4.3768;4.1529 +;-;-;-;-;-;-;-;-;- + 5133 + 1 1.37 168510.9 1.0 6055 4676 10724 HBL1_DMSO_200M_050219_2,10733 HBL1_DMSO_200M_050219_2,10733,GAYDGEEHLI True True GAYDGEEHLI 57.961753 552.253649890423 16280753.0 10724.0 ENSG00000214107|ENST00000397548|MAGEB1 4.506308396657308 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10734 57.971 527.0 420720.0 25 0 45181.0 + 11555 GIVAHIQEV 9 199 483.2744473607701 964.5343417883404 2 483.2748596072197 MULTI CID FTMS 0 0 0 10724 329002.53125 1.0 0 0.0 10 Unmodified _GIVAHIQEV_ ENSG00000015133|ENST00000389857|CCDC88C;ENST00000553437.1_1_14:91808648-91875041:-|nuORF 85.27202061508552 0.0162393975915471 4 {[VA]|[{I|L}G]}H{I|L}G{I|L}QEV 9 3 + 80.57 0.0 0.0 8.3532 8.3532 83.33 0.0 0.0 0.0 20.051499783199063 14.973024840566469 14.973024840566469 2.4472749489669354 0 1.3737125054200234 2.0 0.0 0.0 {[VA]|[{I|L}G]}H{I|L}G{I|L}QEV;{[VA]|[{I|L}G]}H{I|L}GAEVAV;{[VA]|[{I|L}G]}H{I|L}GAEG{I|L}V;{[VA]|[{I|L}G]}H{I|L}GAG{I|L}EV;{[VA]|[{I|L}G]}H{I|L}QEVAV;{[VA]|[{I|L}G]}H{I|L}G{I|L}WAV;{[VA]|[{I|L}G]}HAV{I|L}QEV;{[VA]|[{I|L}G]}H{I|L}QEG{I|L}V;{[VA]|[{I|L}G]}H{I|L}GQ{I|L}EV;{[VA]|[{I|L}G]}H{I|L}G{I|L}[AG]EV 8.3532;8.0995;7.948;7.7821;7.739;7.7344;7.6286;7.5875;7.4169;7.3986 -;-;-;-;-;-;-;-;-;- 6258 1 1.37 168802.6 1.0 6056 4676 10724 HBL1_DMSO_200M_050219_2,10734 HBL1_DMSO_200M_050219_2,10734,GIVAHIQEV True True GIVAHIQEV 57.971014 483.27485960722 1412881.25 10724.0 ENSG00000015133|ENST00000389857|CCDC88C;;ENST00000553437.1_1_14:91808648-91875041:-|nuORF 6.241555690765381 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10735 57.983 691.0 336690.0 25 0 27987.0 + 9811 FPAVVKNV 8 190 437.26314859228336 872.5117442513667 2 437.2625305056572 MULTI CID FTMS 0 0 0 10724 234301.390625 0.7477450896109965 -5 0.4235343933105469 11 Unmodified _FPAVVKNV_ ENSG00000103723|ENST00000535359|AP3B2;ENSG00000132842|ENST00000255194|AP3B1;ENST00000535385.5_1_15:83357894-83378458:-|nuORF;ENST00000535513.1_1_15:83357409-83378458:-|nuORF;ENST00000561455.5_1_15:83355747-83377528:-|nuORF;nc|ENSG00000103723|Q13367-3|AP3B2;nc|ENSG00000103723|Q13367|AP3B2;nc|ENSG00000132842|O00203-3|AP3B1 127.53666659039838 8.530569911105416e-05 4 {M(Oxidation (M))|F}PAVVKNV 8 0 + 72.065 0.0 0.0 8.2595 8.2595 90.57 0.0 0.0 0.0 9.218851356388091 9.208187539523756 9.208187539523756 8.305300040193025 0 1.341129063296272 0.0 0.0 1.6080670093629827 + + {M(Oxidation (M))|F}PAVVKNV;{M(Oxidation (M))|F}PAVVKGGV;{M(Oxidation (M))|F}PAVVKVN;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AVV{I|L}VE;{M(Oxidation (M))|F}PAVVKGVG;{M(Oxidation (M))|F}V[PA]VKNV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{I|L}]{I|L}VE;{M(Oxidation (M))|F}PAVVKVGG;{M(Oxidation (M))|F}V{I|L}[PG]KNV;{M(Oxidation (M))|F}V[PA]VKGGV 8.2595;7.3076;7.2041;7.2029;6.5291;6.0499;5.7822;5.7602;5.2065;5.098 +;-;-;-;-;-;-;-;-;- + 655 + 1 1.37 175833.6 1.0 6057 4676 10724 HBL1_DMSO_200M_050219_2,10735 HBL1_DMSO_200M_050219_2,10735,FPAVVKNV True True FPAVVKNV 57.983007 437.262530505657 4827487.5 10724.0 ENST00000535513.1_1_15:83357409-83378458:-|nuORF;;ENSG00000103723|ENST00000535359|AP3B2;;nc|ENSG00000132842|O00203-3|AP3B1;;nc|ENSG00000103723|Q13367|AP3B2;;ENSG00000132842|ENST00000255194|AP3B1;;nc|ENSG00000103723|Q13367-3|AP3B2;;ENST00000535385.5_1_15:83357894-83378458:-|nuORF;;ENST00000561455.5_1_15:83355747-83377528:-|nuORF 6.743140697479248 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10736 57.993 597.0 206940.0 25 0 15042.0 -1 VSMTCLNLTH 10 154 596.2805909579481 0 596.2810546755791 PEAK CID FTMS 0 0 0 10724 208082.765625 1.0 0 0.0 12 Carbamidomethyl (C),Oxidation (M) _VSM(Oxidation (M))TC(Carbamidomethyl (C))LNLTH_ ENST00000313010.7_1_11:82549540-82549579:-|nuORF 22.736283301280096 0.276231959287006 4 Y{I|L}KR 4 -1 18.584 0.0 0.0 1.561 0.0 0.0 339.0921919209606 288.0994967096313 627.1916886305919 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.7302046884880937 Y{I|L}KR 1.561 - 271 + 1 1.37 95188.0 1.0 6058 4676 10724 HBL1_DMSO_200M_050219_2,10736 HBL1_DMSO_200M_050219_2,10736,VSMTCLNLTH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10737 57.997 162.0 517650.0 25 0 67679.0 9105 FFLRRNLA 8 105 346.2063855555212 1035.5973272667636 3 346.2056152224541 MULTI CID FTMS 0 0 0 10724 218240.09375 1.0 0 0.0 13 Unmodified _FFLRRNLA_ AluSx_dup75258|chr12:47209274-47209494:+|2.599975365397313|0.0266183455393978|6.61|46.0|11|2|anti-sense 6.2057823575117 0.7866635192979977 4 {M(Oxidation (M))|F}{I|L}E 3 6 26.198 0.0 0.0 2.5297 0.0 0.0 628.3778937120934 0.0 628.3778937120934 0.0 15.36043214641512 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}E 2.5297 - 120 1 1.37 72854.7 1.0 6059 4676 10724 HBL1_DMSO_200M_050219_2,10737 HBL1_DMSO_200M_050219_2,10737,FFLRRNLA False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 10738 58.012 800.0 448710.0 25 0 43650.0 21059 LPAELRETLL 10 213 385.5647004295904 1153.6722718889712 3 385.5642883181572 MULTI CID FTMS 0 0 0 10724 164432.1875 0.8156154957070298 -1 0.0809440612792968 14 Unmodified _LPAELRETLL_ ENSG00000095066|ENST00000397668|HOOK2;ENST00000589398.1_1_19:12876641-12878865:-|nuORF;nc|ENSG00000095066|Q96ED9-2|HOOK2 26.268140514670165 0.3785003716575977 4 {I|L}PD 3 8 41.387 0.0 0.0 3.5875 0.0 0.0 0.0 825.485067351163 825.485067351163 23.482587709797325 0.0 0.0 0.0 0 0.25 1.5228787452803376 0.6747425010840047 0.0 {I|L}PD 3.5875 - 1084 + 1 1.37 286484.5 0.9100000262260436 6060 4676 10724 HBL1_DMSO_200M_050219_2,10738 HBL1_DMSO_200M_050219_2,10738,LPAELRETLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10739 58.025 800.0 104550.0 25 0 10640.0 + -1 NVVPMVYF 8 91 984.4891250326116 983.4818485660114 1 985.045947253704 MULTI CID FTMS 0 0 0 -1 0 15 Oxidation (M) _NVVPM(Oxidation (M))VYF_ REV__ENSG00000080618|ENST00000181383|CPB2 14.581692164780916 0.6954967302934248 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}K 4 -1 19.526 0.0 0.0 1.9854 0.0 0.0 0.0 445.17788579388 445.17788579388 7.187101754021825 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.2614393726401688 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}K 1.9854 - 369 1 1.37 59229.9 0.8600000143051147 6061 4676 10724 HBL1_DMSO_200M_050219_2,10739 HBL1_DMSO_200M_050219_2,10739,NVVPMVYF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10740 58.031 323.0 263190.0 25 0 17192.0 + 27775 PLPPGFTPV 9 109 462.7611985671394 923.5078442010788 2 462.7609435915947 MULTI CID FTMS 0 0 0 10724 150414.828125 0.0961797130846825 13 -1.4552040100097656 16 Unmodified _PLPPGFTPV_ REV__ENSG00000132359|ENST00000254695|RAP1GAP2;REV__nc|ENSG00000132359|Q684P5-2|RAP1GAP2;REV__nc|ENSG00000132359|Q684P5-3|RAP1GAP2 19.438996006549623 0.310492472477042 4 {[QG]|[NA]}V 3 -1 14.705 0.0 0.0 1.5923 0.0 0.0 0.0 636.3358220665663 636.3358220665663 -1.492887666437143 0.0 -1.492887666437143 0.0 0 0.5 0.0 0.0 0.2742275032520141 {[QG]|[NA]}V 1.5923 - 223 1 1.37 69796.4 1.0 6062 4676 10724 HBL1_DMSO_200M_050219_2,10740 HBL1_DMSO_200M_050219_2,10740,PLPPGFTPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10741 58.045 800.0 58106.0 25 0 11935.0 -1 0 32 1191.5014498130145 3571.482520039244 3 1192.168749988079 MULTI CID FTMS 0 0 0 10724 128278.9375 1.0 0 0.0 17 4 N 1 -1 6.9897 0.0 0.0 0.19571 0.0 0.0 2482.901514381 971.5381937960344 3454.439708177034 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.19571 - 1 + 1 1.37 44924.3 0.7099999785423279 6063 4676 10724 HBL1_DMSO_200M_050219_2,10741 HBL1_DMSO_200M_050219_2,10741, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10742 58.06 800.0 77900.0 25 0 3545.3 -1 IMFLGFLPPLY 11 105 663.861513452512 1325.708473971824 2 663.8624145388603 MULTI CID FTMS 0 0 0 10724 105215.0703125 0.6858780870686171 1 -0.1579856872558593 18 Oxidation (M) _IM(Oxidation (M))FLGFLPPLY_ SLC16A7|p.F262Lfs*39|1|0.23|ENSG00000118596|chr12:59775075-59775075|T/-|frameshift_variant 6.723162845929126 0.8434276150410019 4 H 1 -1 10.969 0.0 0.0 0.82741 0.0 0.0 1170.6385409657676 0.0 1170.6385409657676 0.0 0.1316446936117454 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.82741 - 110 + 1 1.37 52437.1 0.959999978542328 6064 4676 10724 HBL1_DMSO_200M_050219_2,10742 HBL1_DMSO_200M_050219_2,10742,IMFLGFLPPLY False False False False variant PXD020620_cell_line HBL1_DMSO_200M_050219_2 10743 58.074 800.0 112480.0 25 0 12560.0 -1 0 103 865.8991707412696 1729.783788549339 2 865.9014770388603 MULTI CID FTMS 0 0 0 10724 84947.1484375 0.4598555967060959 -6 0.4614219665527344 19 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[YV][WH]{I|L}Q 14 -1 + 56.257 0.0 0.0 3.2522 3.2522 66.242 0.0 0.0 0.0 2.377427414467008 2.377427414467008 2.377427414467008 2.377427414467008 0 0.7887254899964358 0.0 0.0 1.1237125054200234 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[YV][WH]{I|L}Q;[NP]{I|L}GGAA[YT]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAA[YT]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GQA[YT]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[YT]A[YT]VQ;{[QV]|[N{I|L}]|[RA]|[KV]}PGGAA[YT]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNAA[YT]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PGQA[YT]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NW[YT]A[YT]VQ;[NP]{I|L}GGAA[YT]DAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.2522;3.1148;3.074;3.0018;2.9169;2.8847;2.8439;2.7717;2.7042;2.5946 -;-;-;-;-;-;-;-;-;- 1366 + 1 1.37 64930.1 0.8199999928474426 6065 4676 10724 HBL1_DMSO_200M_050219_2,10743 HBL1_DMSO_200M_050219_2,10743, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10744 58.088 800.0 71383.0 25 0 3658.5 -1 0 79 882.4134399294853 0 882.4134399294853 PEAK CID FTMS 0 0 0 -1 0 20 4 PN 2 -1 17.206 0.0 0.0 0.97607 0.0 0.0 261.0812905537576 1287.6184786432252 1548.6997691969827 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 PN 0.97607 - 49 + 1 1.37 43798.3 0.800000011920929 6066 4676 10724 HBL1_DMSO_200M_050219_2,10744 HBL1_DMSO_200M_050219_2,10744, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10746 58.092 2.8 19338000.0 25 0 2324400.0 + 44677 YPFKPPKV 8 53 488.2868778785377 974.5592028238756 2 488.2870666384697 MULTI CID FTMS 0 0 0 10745 17335876.0 0.5701184247307408 2 -0.2042045593261718 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 64.461 0.0 0.0 6.6144 6.6144 93.223 0.0 0.0 0.0 43.482135413933776 6.743609930009278 6.743609930009278 52.44972548463494 0 0.3807196863200844 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.6144;1.2325;0.35229 +;-;- + 95 + 1 1.37 46876.7 1.0 6067 4677 10745 HBL1_DMSO_200M_050219_2,10746 HBL1_DMSO_200M_050219_2,10746,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10747 58.095 126.0 635060.0 25 0 79105.0 + 21223 LPDGRIIKV 9 102 337.55035122418985 1009.6292242727696 3 337.5498840212822 MULTI CID FTMS 0 0 0 10745 405898.15625 0.0061288957206312 9 -0.9949951171875 2 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 19.62595529434964 0.305431704817896 4 {I|L}PDV 4 5 38.237 0.0 0.0 3.7872 0.0 0.0 0.0 582.3721407525999 582.3721407525999 11.861818737241734 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.4247425010840047 0.0 {I|L}PDV 3.7872 - 116 + 1 1.37 71526.5 1.0 6068 4677 10745 HBL1_DMSO_200M_050219_2,10747 HBL1_DMSO_200M_050219_2,10747,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10748 58.096 22.0 2635300.0 25 0 240760.0 + 21481 LPHPGLQV 8 82 430.75284553218125 859.4911381311625 2 430.7529785037041 MULTI CID FTMS 0 0 0 10745 2536180.25 0.7071850090779399 -2 0.2389297485351562 3 Unmodified _LPHPGLQV_ ENSG00000184743|ENST00000398868|ATL3 52.69307289633392 0.1265801145616722 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP{I|L}QV 8 3 + 47.433 0.0 0.0 5.5187 5.5187 77.888 0.0 0.0 0.0 6.721675119240516 16.40978057358332 6.721675119240516 4.304009240123889 0 1.0356668758921828 0.0 0.2742275032520141 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP{I|L}QV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GPQ{I|L}V;[{I|L}P]HGP{I|L}QV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP{I|L}[AG]V;[{I|L}P]HGPQ{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP[AG]{I|L}V;[{I|L}P]HGP{I|L}[AG]V;[{I|L}P]GHP{I|L}QV;[{I|L}P]HGP[AG]{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[RK]{[ET]|[MV]}V 5.5187;5.018;4.7367;4.4411;4.2359;3.9403;3.659;3.3883;3.1583;3.0515 -;-;-;-;-;-;-;-;-;- 186 1 1.37 48930.1 1.0 6069 4677 10745 HBL1_DMSO_200M_050219_2,10748 HBL1_DMSO_200M_050219_2,10748,LPHPGLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10749 58.097 17.0 2036000.0 25 0 154840.0 21902 LPPGGPTQII 10 70 496.7926827535134 991.5708125738269 2 496.7923461794853 MULTI CID FTMS 0 0 0 10745 2146905.5 0.5377166474208064 -5 0.5041847229003906 4 Unmodified _LPPGGPTQII_ ENSG00000122547|ENST00000242108|EEPD1 21.74664581756881 0.480091245866545 4 [{I|L}P]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4 8 29.922 0.0 0.0 3.0176 0.0 0.0 0.0 484.2767811619706 484.2767811619706 10.96787486224656 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}P]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3.0176 - 169 1 1.37 31067.2 1.0 6070 4677 10745 HBL1_DMSO_200M_050219_2,10749 HBL1_DMSO_200M_050219_2,10749,LPPGGPTQII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10750 58.098 39.0 1312900.0 25 0 134860.0 15205 IPEYLIHL 8 85 499.2875991042045 996.560645275209 2 499.2875244021416 MULTI CID FTMS 0 0 0 10745 1399043.875 0.6076725373203046 -6 0.5815200805664062 5 Unmodified _IPEYLIHL_ ENSG00000214694|ENST00000409978|ARHGEF33;nc|ENSG00000214694|A8MVX0|ARHGEF33 26.34127834903884 0.4900704351052977 4 {I|L}PE 3 5 48.927 0.0 0.0 4.9096 0.0 0.0 0.0 654.3581214340772 654.3581214340772 22.98455006504028 0.0 0.0 0.0 0 0.75 1.5228787452803376 0.0 0.0 + {I|L}PE 4.9096 + + 105 + 1 1.37 48876.1 1.0 6071 4677 10745 HBL1_DMSO_200M_050219_2,10750 HBL1_DMSO_200M_050219_2,10750,IPEYLIHL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10751 58.1 33.0 1457700.0 25 0 228260.0 37870 TLVQLMQP 8 75 465.2600274572109 928.505501981222 2 465.2599365115166 MULTI CID FTMS 0 0 0 10745 1208821.375 1.0 0 0.0 6 Unmodified _TLVQLMQP_ ENSG00000203908|ENST00000370367|KHDC3L 19.256988751693697 0.6264283240490721 4 [{I|L}A]EK{I|L}M[QP] 8 3 + 59.927 0.0 0.0 6.4541 6.4541 90.587 0.0 0.0 0.0 23.679767852945943 47.84807404377487 23.679767852945943 16.977437731477423 0 0.9247425010840048 2.0 0.3054621874040891 0.0 [{I|L}A]EK{I|L}M[QP];[{I|L}A]EM[K{I|L}][QP];{[CP]|[EA]}{I|L}K{I|L}M[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}VV{I|L}M[QP];[{I|L}A][CS][KP]{I|L}[TP];[TA]AVV{I|L}M[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}M[KP]{I|L}[TP];{[TV]|[{I|L}S]}[Q{I|L}]{I|L}M[QP];[TA]AM[KP]{I|L}[TP];{[CP]|[EA]}{I|L}M[K{I|L}][QP] 6.4541;4.6256;3.5171;2.5802;2.3265;2.2688;2.2224;1.919;1.9109;1.6886 -;-;-;-;-;-;-;-;-;- 300 1 1.37 46817.7 1.0 6072 4677 10745 HBL1_DMSO_200M_050219_2,10751 HBL1_DMSO_200M_050219_2,10751,TLVQLMQP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10752 58.101 52.0 1014900.0 25 0 122890.0 + 34207 SLPEAEGVID 10 77 515.2584290372049 1028.5023051412095 2 515.2585327029228 MULTI CID FTMS 0 0 0 10745 759623.3125 0.3796359559841211 -2 0.2389297485351562 7 Unmodified _SLPEAEGVID_ REV__ENSG00000184735|ENST00000327968|DDX53 20.453626601364224 0.5043500229302764 4 {NN|[MP]|[D{I|L}]|[EV]}EPQE 6 -1 47.031 0.0 0.0 4.5728 0.0 0.0 0.0 314.17012675669724 314.17012675669724 29.75534524798757 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.8157018393238156 0.0 {NN|[MP]|[D{I|L}]|[EV]}EPQE 4.5728 - 196 1 1.37 42960.0 1.0 6073 4677 10745 HBL1_DMSO_200M_050219_2,10752 HBL1_DMSO_200M_050219_2,10752,SLPEAEGVID False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10753 58.103 77.0 687780.0 25 0 110750.0 + 15176 IPDGGVHIV 9 67 453.75586230180863 905.4971716704172 2 453.7559692263603 MULTI CID FTMS 0 0 0 10745 704317.1875 0.964242491553843 -1 0.1579856872558593 8 Unmodified _IPDGGVHIV_ ENSG00000244462|ENST00000374114|RBM12;ENST00000352393.8_2_20:34220804-34246883:-|nuORF;ENST00000440240.5_1_20:34220804-34252800:-|nuORF;ENST00000454607.5_1_20:34220607-34246883:-|nuORF 30.22481116460888 0.1466181017706357 4 {I|L}PD{[NV]|[RG]}H[{I|L}V] 8 2 + 45.512 0.0 0.0 5.0262 5.0262 86.65 0.0 0.0 0.0 24.596667707322112 4.6040937697618745 4.6040937697618745 45.51181751853561 0 0.7887254899964358 1.3010299956639813 0.0 0.0 {I|L}PD{[NV]|[RG]}H[{I|L}V] 5.0262 - 67 + 1 1.37 48377.4 1.0 6074 4677 10745 HBL1_DMSO_200M_050219_2,10753 HBL1_DMSO_200M_050219_2,10753,IPDGGVHIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10754 58.104 63.0 733310.0 25 0 118160.0 + 2936 AVHDSFVAV 9 78 472.7447803540549 943.4750077749098 2 472.7447082400322 MULTI CID FTMS 0 0 0 10745 530410.625 0.6601574298933216 -1 0.1579856872558593 9 Unmodified _AVHDSFVAV_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 53.57557251787612 0.0325303259649373 4 {[VA]|[{I|L}G]}HDS{M(Oxidation (M))|F}VAV 9 0 + 44.305 0.0 0.0 4.6959 4.6959 69.05 0.0 0.0 0.0 12.331655954731248 28.819999665787183 12.331655954731248 1.293709283484084 0 0.8182503180159344 1.3010299956639813 0.7302046884880937 0.0 + + {[VA]|[{I|L}G]}HDS{M(Oxidation (M))|F}VAV;{[VA]|[{I|L}G]}HDYAVAV;[HD]{[VA]|[{I|L}G]}S{M(Oxidation (M))|F}VAV;[HD]{[VA]|[{I|L}G]}YAVAV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QS]|[NT]}D[KP]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[WQ][TP]AV;{[QD]|[EN]|[WG]|[KD]|[RS]}[QT][WP]AV 4.6959;4.5588;3.0818;2.9447;0.31933;0.1395;0.036783 +;-;-;-;-;-;- + 139 1 1.37 41336.3 1.0 6075 4677 10745 HBL1_DMSO_200M_050219_2,10754 HBL1_DMSO_200M_050219_2,10754,AVHDSFVAV True True AVHDSFVAV 58.10419 472.744708240032 14299195.0 10745.0 ENSG00000080345|ENST00000444746|RIF1;;nc|ENSG00000080345|Q5UIP0-2|RIF1 6.449107646942139 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10755 58.109 266.0 561580.0 25 0 57014.0 -1 PTDILSCC 8 150 483.20656199592935 964.3985710586588 2 483.2072326540947 MULTI CID FTMS 0 0 0 10745 488876.03125 0.1939448593761405 -4 0.4240989685058594 10 2 Carbamidomethyl (C) _PTDILSC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000457894.4_1_X:38665553-38665586:+|nuORF 19.438996006549623 0.6237395211498085 4 [EP]S{I|L}G 5 -1 29.79 0.0 0.0 3.089 0.0 0.0 0.0 478.14772201984937 478.14772201984937 2.9948230292039923 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.9247425010840048 0.0 [EP]S{I|L}G 3.089 - 641 1 1.37 115850.8 1.0 6076 4677 10745 HBL1_DMSO_200M_050219_2,10755 HBL1_DMSO_200M_050219_2,10755,PTDILSCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10756 58.111 63.0 780180.0 25 0 56704.0 + -1 YPFANKESI 9 76 534.2759574997344 1066.5373620662688 2 534.7722045779228 MULTI CID FTMS 0 0 0 10745 430693.8125 0.7074991345043842 9 -0.9949951171875 11 Oxidation (M) _LMALTTM(Oxidation (M))ASL_ ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4 15.847184025352805 0.5816416552707754 4 PP{I|L} 3 -1 16.198 0.0 0.0 1.5187 0.0 0.0 129.00291961179238 627.3234957330686 756.3264153448611 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP{I|L} 1.5187 - 31 + 1 1.37 45045.9 1.0 6077 4677 10745 HBL1_DMSO_200M_050219_2,10756 HBL1_DMSO_200M_050219_2,10756,LMALTTMASL False False YPFANKESI 58.110648 534.772204577923 3054401.5 10745.0 ENSG00000146463|ENST00000314607|ZMYM4;;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;;nc|ENSG00000146463|Q5VZL5-4|ZMYM4 2.8832463026046757 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10757 58.113 84.0 721190.0 25 0 49545.0 + 28346 GVPSTAIREI 10 91 521.7992705614853 1041.5839881897705 2 521.7977172732353 MULTI CID FTMS 0 0 0 10745 428332.71875 0.7271303473201796 -1 0.1579856872558593 12 Unmodified _PSDIRLAGTL_ ENST00000475504.6_1_10:62539923-62545554:+|nuORF;ENSG00000170312|ENST00000395284|CDK1;ENSG00000123374|ENST00000266970|CDK2;ENSG00000250506|ENST00000448471|CDK3;nc|ENSG00000123374|P24941-2|CDK2;nc|ENSG00000170312|P06493-2|CDK1;ENST00000567351.5_2_17:73997368-73998786:+|nuORF 17.11289562659939 0.5604042439455784 4 [VG]PSTA{I|L}[W{I|L}]V 10 9 + 58.799 0.0 0.0 5.6452 5.6452 71.175 0.0 0.0 0.0 39.61813275393605 1.760691023043783 1.760691023043783 0.4139268515822536 0 0.3807196863200844 2.0 0.0 0.0 [VG]PSTA{I|L}[W{I|L}]V;[VG]PSTA{I|L}[NG]KV;[VG]PSTA{I|L}{[RE]|[WV]}{I|L};[VG]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[W{I|L}]V;[VG]{[RE]|[WV]}A{I|L}[W{I|L}]V;[VG]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[NG]KV;[VG]{[RE]|[WV]}A{I|L}[NG]KV;[VG]A[DV]A{I|L}[W{I|L}]V;[VG]A[DV]A{I|L}[NG]KV;[VG]{[RE]|[WV]}A{I|L}{[RE]|[WV]}{I|L} 5.6452;5.6054;5.4398;3.5069;3.5069;3.4629;3.4629;3.3869;3.3472;3.3015 -;-;-;-;-;-;-;-;-;- 127 + 1 1.37 59121.3 1.0 6078 4677 10745 HBL1_DMSO_200M_050219_2,10757 HBL1_DMSO_200M_050219_2,10757,PSDIRLAGTL False False GVPSTAIREI 58.112546 521.797717273235 1701155.375 10745.0 ENST00000475504.6_1_10:62539923-62545554:+|nuORF;;ENSG00000170312|ENST00000395284|CDK1;;ENSG00000123374|ENST00000266970|CDK2;;ENSG00000250506|ENST00000448471|CDK3;;nc|ENSG00000123374|P24941-2|CDK2;;nc|ENSG00000170312|P06493-2|CDK1;;ENST00000567351.5_2_17:73997368-73998786:+|nuORF 4.814129670461019 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10758 58.117 211.0 351030.0 25 0 45133.0 -1 LPGNWAMEGIV 11 92 601.7951037070706 1201.575654480941 2 601.7955200076103 MULTI CID FTMS 0 0 0 10745 388030.375 1.0 0 0.0 13 Oxidation (M) _LPGNWAM(Oxidation (M))EGIV_ ENST00000564063.1_1_1:108743279-108743501:+|nuORF 29.84058131909904 0.3915366693542702 4 {I|L}PS{I|L}[C(Carbamidomethyl (C))S][YT]YV 10 -1 + 51.551 0.0 0.0 4.2903 4.2903 80.512 0.0 0.0 0.0 43.65865011156763 6.993559221610965 6.993559221610965 11.619543704721586 0 1.25 1.6989700043360187 0.0 0.0 {I|L}PS{I|L}[C(Carbamidomethyl (C))S][YT]YV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HHYN{I|L}YV;{I|L}PS{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[YT][KC];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HHYGG{I|L}YV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HHY{I|L}NYV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HH{I|L}YNYV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HHYNY{I|L}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HHY{I|L}GGYV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HH{I|L}YGGYV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HHYGGY{I|L}V 4.2903;3.3233;2.6507;2.5569;2.491;2.491;2.4595;1.7247;1.7247;1.6932 -;-;-;-;-;-;-;-;-;- 304 + 1 1.37 59307.0 1.0 6079 4677 10745 HBL1_DMSO_200M_050219_2,10758 HBL1_DMSO_200M_050219_2,10758,LPGNWAMEGIV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10759 58.119 89.0 598640.0 25 0 41164.0 + 1373 ALAEEVEQV 9 92 494.25292737398814 986.4913018147764 2 494.2525512576103 MULTI CID FTMS 0 0 0 10745 368591.4375 0.670488236737324 -1 0.1579856872558593 14 Unmodified _ALAEEVEQV_ ENSG00000128335|ENST00000358502|APOL2 36.04419817259434 0.0971720506436186 4 {NN|[MP]|[D{I|L}]|[EV]}EA 4 6 29.067 0.0 0.0 2.9465 0.0 0.0 0.0 555.2778673267482 555.2778673267482 0.7294699217310487 0.0 0.0 0.0 0 0.0 0.958607314841775 0.805462187404089 0.0 {NN|[MP]|[D{I|L}]|[EV]}EA 2.9465 - 284 1 1.37 46228.0 1.0 6080 4677 10745 HBL1_DMSO_200M_050219_2,10759 HBL1_DMSO_200M_050219_2,10759,ALAEEVEQV True True ALAEEVEQV 58.118529 494.25255125761 4882605.5 10745.0 ENSG00000128335|ENST00000358502|APOL2 5.489710330963135 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10760 58.124 293.0 430260.0 25 0 82970.0 + 24935 MPPPPGPAL 9 125 438.73571008804686 875.4568672428937 2 438.7359802126884 MULTI CID FTMS 0 0 0 10745 305519.3125 0.7472638998656294 -4 0.4240989685058594 15 Unmodified _MPPPPGPAL_ ENSG00000119596|ENST00000325680|YLPM1;nc|ENSG00000119596|P49750-1|YLPM1;nc|ENSG00000119596|P49750-3|YLPM1 67.41302359171755 0.0220989861905124 4 {[HG]|PP}GPPAPM{I|L} 9 4 + 33.299 0.0 0.0 3.8036 3.8036 68.471 0.0 0.0 0.0 2.587418566968161 14.431890546242348 2.587418566968161 2.8879553924696992 0 0.4247425010840047 0.0 0.0 0.0 {[HG]|PP}GPPAPM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KG]APM{I|L};[PA]GPPPPM{I|L};{NN|[MP]|[D{I|L}]|[EV]}PPGPPA{I|L};[PG]PPPAPM{I|L};{[HG]|PP}GPPMPA{I|L};{NN|[MP]|[D{I|L}]|[EV]}PGPPPA{I|L};{[HG]|PP}GPAPPM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KG]MPA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KQ]PM{I|L} 3.8036;3.4737;3.393;3.2504;3.2266;3.1982;3.1187;3.1159;2.8683;2.7415 -;-;-;-;-;-;-;-;-;- 541 1 1.37 98615.3 1.0 6081 4677 10745 HBL1_DMSO_200M_050219_2,10760 HBL1_DMSO_200M_050219_2,10760,MPPPPGPAL True True MPPPPGPAL 58.123896 438.735980212688 15422072.0 10745.0 nc|ENSG00000119596|P49750-3|YLPM1;;nc|ENSG00000119596|P49750-1|YLPM1;;ENSG00000119596|ENST00000325680|YLPM1 4.747434616088867 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10761 58.134 606.0 512000.0 25 0 51243.0 + 1379 ALAEKFKEL 9 183 524.8050830033019 1047.5956130734037 2 524.8050414919853 MULTI CID FTMS 0 0 0 10745 296370.28125 0.0388796884550969 -3 0.3682136535644531 16 Unmodified _ALAEKFKEL_ ENSG00000124541|ENST00000244496|RRP36;nc|ENSG00000124541|Q96EU6-2|RRP36 75.5705956163825 0.0189455680524554 4 {I|L}AAEK{M(Oxidation (M))|F}KE{I|L} 9 2 + 106.32 0.0 0.0 10.149 10.149 80.519 0.0 0.0 0.0 53.24661418442976 20.69129192331837 20.69129192331837 0.2287874528033739 0 2.309894379144197 2.0 1.805462187404089 0.0 {I|L}AAEK{M(Oxidation (M))|F}KE{I|L};A{I|L}AEK{M(Oxidation (M))|F}KE{I|L};{I|L}AAEK{M(Oxidation (M))|F}{[SA]|[TG]}V{I|L};A{I|L}AEK{M(Oxidation (M))|F}{[SA]|[TG]}V{I|L};{I|L}AAEK{M(Oxidation (M))|F}[VG]T{I|L};A{I|L}AEK{M(Oxidation (M))|F}[VG]T{I|L};{I|L}AAEK{M(Oxidation (M))|F}{[VA]|[{I|L}G]}S{I|L};A{I|L}AEK{M(Oxidation (M))|F}{[VA]|[{I|L}G]}S{I|L};{I|L}AAEK{M(Oxidation (M))|F}{[SA]|[TG]}{I|L}V;A{I|L}AEK{M(Oxidation (M))|F}{[SA]|[TG]}{I|L}V 10.149;10.127;8.6077;8.5859;8.3255;8.3037;8.2759;8.2541;7.9909;7.9691 -;+;-;-;-;-;-;-;-;- + 9254 + 1 1.37 236597.6 1.0 6082 4677 10745 HBL1_DMSO_200M_050219_2,10761 HBL1_DMSO_200M_050219_2,10761,ALAEKFKEL True True ALAEKFKEL 58.134488 524.805041491985 165091320.0 10745.0 nc|ENSG00000124541|Q96EU6-2|RRP36;;ENSG00000124541|ENST00000244496|RRP36 5.484103679656982 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10762 58.146 683.0 369800.0 25 0 28675.0 1429 ALDQVDDGEV 10 193 530.7428121970337 1059.4710714608673 2 530.7435790896416 MULTI CID FTMS 0 0 0 10745 220896.375 1.0 0 0.0 17 Unmodified _ALDQVDDGEV_ ENSG00000143514|ENST00000343537|TP53BP2;nc|ENSG00000143514|Q13625-2|TP53BP2;nc|ENSG00000143514|Q13625|TP53BP2 18.1463463914782 0.5430639438673815 4 {[DA]|[EG]}{I|L}Q 4 8 30.317 0.0 0.0 2.8616 0.0 0.0 0.0 629.2403640236204 629.2403640236204 13.942256035117278 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 {[DA]|[EG]}{I|L}Q 2.8616 - 958 1 1.37 203629.7 1.0 6083 4677 10745 HBL1_DMSO_200M_050219_2,10762 HBL1_DMSO_200M_050219_2,10762,ALDQVDDGEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10763 58.159 733.0 319260.0 25 0 20197.0 + 39182 TYQDIQNTI 9 221 548.2698200104861 1094.525087087772 2 548.2690307497978 MULTI CID FTMS 0 0 0 10745 180247.6875 0.5314756387441497 -2 0.2389297485351562 18 Unmodified _TYQDIQNTI_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A 47.74868867922204 0.0453060283459952 4 [YT]QD{I|L}Q{I|L}{[QS]|[NT]} 9 2 + 59.891 0.0 0.0 5.4719 5.4719 83.537 0.0 0.0 0.0 9.77394167600788 7.147642715192504 7.147642715192504 9.208187539523747 0 0.0 2.0 1.180884548956689 0.0 [YT]QD{I|L}Q{I|L}{[QS]|[NT]};[YT]QD{I|L}[AG]{I|L}{[QS]|[NT]};[YT][AG]D{I|L}Q{I|L}{[QS]|[NT]};{[QS]|[NT]}{I|L}EYQ{I|L}{[QS]|[NT]};[AG]DYT{I|L}Q{I|L}{[QS]|[NT]};[{I|L}T]NEYQ{I|L}{[QS]|[NT]};{[TV]|[{I|L}S]}QEYQ{I|L}{[QS]|[NT]};[AG]D{I|L}TYQ{I|L}{[QS]|[NT]};{[QD]|[EN]|[WG]|[KD]|[RS]}YT{I|L}Q{I|L}{[QS]|[NT]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}TYQ{I|L}{[QS]|[NT]} 5.4719;4.6306;4.6306;4.5789;4.513;4.2659;4.2598;4.2292;4.1324;4.0874 -;-;-;-;-;-;-;-;-;- 6420 1 1.37 186384.0 1.0 6084 4677 10745 HBL1_DMSO_200M_050219_2,10763 HBL1_DMSO_200M_050219_2,10763,TYQDIQNTI True True TYQDIQNTI 58.159083 548.269030749798 3266733.25 10745.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A 5.689315954844157 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10764 58.167 455.0 376010.0 25 0 17983.0 -1 0 212 334.1856582521924 333.1783817855924 1 334.1852294802666 MULTI CID FTMS 0 0 0 10745 172674.3125 0.6138942454740173 -16 1.2269744873046875 19 4 W 1 -1 9.8329 0.0 0.0 2.9512 0.0 0.0 129.0889480471143 0.0 129.0889480471143 0.0 0.6841897995400359 0.0 0.0 0 0.0 0.0 0.0 0.0 W 2.9512 - 23 + 1 1.37 135530.2 1.0 6085 4677 10745 HBL1_DMSO_200M_050219_2,10764 HBL1_DMSO_200M_050219_2,10764, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10765 58.182 800.0 164680.0 25 0 11783.0 + 18111 KTLEDGVRLV 10 154 565.332305589544 1128.650058245888 2 565.3325073122978 MULTI CID FTMS 0 0 0 10745 147820.09375 1.0 0 0.0 20 Unmodified _KTLEDGVRLV_ ENSG00000156299|ENST00000541036|TIAM1;nc|ENSG00000156299|Q13009-2|TIAM1 26.120906184454547 0.3818084954799617 4 KT{I|L}ED 5 5 57.083 0.0 0.0 5.0577 0.0 0.0 0.0 539.3317878528725 539.3317878528725 38.36421163904572 0.0 0.0 0.0 0 1.0629529932484498 0.0 0.8494850021680094 0.0 + KT{I|L}ED 5.0577 + + 561 + 1 1.37 102198.3 0.8999999761581421 6086 4677 10745 HBL1_DMSO_200M_050219_2,10765 HBL1_DMSO_200M_050219_2,10765,KTLEDGVRLV False True KTLEDGVRLV 58.182452 565.332507312298 853108.75 10745.0 ENSG00000156299|ENST00000541036|TIAM1;;nc|ENSG00000156299|Q13009-2|TIAM1 5.93402910232544 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10767 58.187 14.0 3252100.0 25 0 669980.0 + 4465 DAYALNHTL 9 66 509.2535253747258 1016.4924978162516 2 509.2537109255791 MULTI CID FTMS 0 0 0 10766 3455577.5 0.0113902649926344 7 -0.7963333129882812 1 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 78.7280429016045 0.0178249292250809 4 {[DA]|[EG]}YA{I|L}N 6 3 63.505 0.0 0.0 6.2475 0.0 0.0 0.0 366.17792688541255 366.17792688541255 36.00833760139686 0.0 0.0 0.0 0 1.274227503252014 1.6989700043360187 0.0 0.7742275032520141 + {[DA]|[EG]}YA{I|L}N 6.2475 + + 230 + 1 1.37 44621.9 1.0 6087 4678 10766 HBL1_DMSO_200M_050219_2,10767 HBL1_DMSO_200M_050219_2,10767,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10768 58.188 9.8 5768800.0 25 0 491470.0 + 39959 VGALVYLGNPS 11 79 545.3014817299004 1088.588410526601 2 545.3011352419853 MULTI CID FTMS 0 0 0 10766 1746807.125 0.4244786273465012 2 -0.2224006652832031 2 Unmodified _VGALVYLGNPS_ REV__ENSG00000065268|ENST00000585809|WDR18 12.240655878213236 0.7805268987462184 4 {[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EV{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 + 24.199 0.0 0.0 2.2229 2.2229 76.313 0.0 0.0 0.0 -2.122665795563421 2.147642715192508 -2.122665795563421 13.802112417116064 0 0.805462187404089 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EV{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}[{I|L}P]KV;{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[DP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 2.2229;0.95504;0.21986 -;-;- 98 + 1 1.37 51520.8 1.0 6088 4678 10766 HBL1_DMSO_200M_050219_2,10768 HBL1_DMSO_200M_050219_2,10768,VGALVYLGNPS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10769 58.189 10.0 4931000.0 25 0 531230.0 -1 EPVKENMKV 9 67 545.2824479364269 1088.5503429396538 2 545.2819091677666 MULTI CID FTMS 0 0 0 10766 2050934.875 0.970556045476088 -1 0.0946197509765625 3 Oxidation (M) _EPVKENM(Oxidation (M))KV_ ENSG00000156469|ENST00000287025|MTERF3;nc|ENSG00000156469|Q96E29-2|MTERF3;nc|ENSG00000156469|Q96E29-3|MTERF3 11.640296217721598 0.521594087909532 4 [EP]V 3 -1 17.905 0.0 0.0 1.6448 0.0 0.0 0.0 760.3643132367819 760.3643132367819 1.706962271689747 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3494850021680094 0.0 [EP]V 1.6448 + + 81 1 1.37 46113.7 1.0 6089 4678 10766 HBL1_DMSO_200M_050219_2,10769 HBL1_DMSO_200M_050219_2,10769,EPVKENMKV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10770 58.191 51.0 1096800.0 25 0 196880.0 + 45930 YYYDGDVGNY 10 75 614.7432829436176 1227.472012954035 2 614.7430908083916 MULTI CID FTMS 0 0 0 10766 1423132.5 0.6739952284822903 1 -0.1095848083496093 4 Unmodified _YYYDGDVGNY_ ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF 32.30548876998284 0.2428506522065767 4 YYDY 4 6 23.901 0.0 0.0 1.9472 0.0 0.0 0.0 620.2335235343663 620.2335235343663 2.49491555391522 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 YYDY 1.9472 - 314 1 1.37 47544.7 1.0 6090 4678 10766 HBL1_DMSO_200M_050219_2,10770 HBL1_DMSO_200M_050219_2,10770,YYYDGDVGNY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10771 58.192 30.0 1684600.0 25 0 171750.0 + 1870 ALVQDLAKA 9 81 464.7767068282735 927.538860723347 2 464.7767516970634 MULTI CID FTMS 0 0 0 10766 1110985.875 0.9926623804878156 -1 0.0946197509765625 5 Unmodified _ALVQDLAKA_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 31.26834338654808 0.1333407332142048 4 [{I|L}A]VQD{I|L}AKA 9 0 + 67.271 0.0 0.0 7.2526 7.2526 90.103 0.0 0.0 0.0 47.145973358261145 8.197859905088634 8.197859905088634 9.208187539523747 0 0.8494850021680094 2.0 0.0 0.4247425010840047 + + [{I|L}A]VQD{I|L}AKA;[{I|L}A]V[AG]D{I|L}AKA 7.2526;6.2598 +;- + 395 + 1 1.37 45413.4 1.0 6091 4678 10766 HBL1_DMSO_200M_050219_2,10771 HBL1_DMSO_200M_050219_2,10771,ALVQDLAKA False True ALVQDLAKA 58.191762 464.776751697063 29517117.0 10766.0 ENSG00000134057|ENST00000256442|CCNB1;;nc|ENSG00000134057|P14635-2|CCNB1 6.240091482798259 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10772 58.193 58.0 871980.0 25 0 55423.0 + 32358 RYPGYMNNDL 10 77 621.7820733641528 1241.5495937951057 2 621.7820922732353 MULTI CID FTMS 0 0 0 10766 838175.5625 0.920411133351704 -1 0.0946197509765625 6 Unmodified _RYPGYMNNDL_ ENSG00000037042|ENST00000251412|TUBG2;ENSG00000131462|ENST00000251413|TUBG1 45.739877483867886 0.1051543674217965 4 [YR][PG]YMNND{I|L} 10 0 + 73.703 0.0 0.0 5.9364 5.9364 84.56 0.0 0.0 0.0 21.7466520388696 43.23568052705596 21.7466520388696 9.164539485499247 0 1.1307196863200843 1.6989700043360187 0.0 0.0 + + [YR][PG]YMNND{I|L};[YR][PG]YMNGGD{I|L};[YR][PG]YMGGND{I|L};[PG]YRYMNND{I|L};[{M(Oxidation (M))|F}V]NNMY{I|L}ND{I|L};{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}YMNND{I|L};[{M(Oxidation (M))|F}V]NNMY[PG]{[MG]|[TS]}{I|L};[PG]YRYMNGGD{I|L};[PG]YRYMGGND{I|L};[{M(Oxidation (M))|F}V]NNMY{I|L}GGD{I|L} 5.9364;5.1982;5.1982;4.0331;3.8955;3.7764;3.6058;3.295;3.295;3.1574 +;-;-;-;-;-;-;-;-;- + 374 1 1.37 42723.0 1.0 6092 4678 10766 HBL1_DMSO_200M_050219_2,10772 HBL1_DMSO_200M_050219_2,10772,RYPGYMNNDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10773 58.195 54.0 1148400.0 25 0 151290.0 45027 YPVKKGVPMA 10 97 363.8745715571168 1088.6018852715504 3 363.8741027712822 MULTI CID FTMS 0 0 0 10766 814925.0625 0.8931225772079229 3 -0.2909736633300781 7 Unmodified _YPVKKGVPMA_ ENSG00000061794|ENST00000081029|MRPS35;nc|ENSG00000061794|P82673-2|MRPS35 10.073929032068715 0.6785112666868882 4 YGP{M(Oxidation (M))|F}[KG]PPKV 10 6 + 42.573 0.0 0.0 3.9108 3.9108 81.161 0.0 0.0 0.0 30.354575339208623 10.457574905606748 10.457574905606748 21.314180440496205 0 0.0 0.0 0.0 0.0 YGP{M(Oxidation (M))|F}[KG]PPKV;GG{I|L}{I|L}V[KG]{M(Oxidation (M))|F}PCV;[KP][{I|L}T][KG]{M(Oxidation (M))|F}PCV 3.9108;1.9529;1.145 -;-;- 124 + 1 1.37 59483.4 1.0 6093 4678 10766 HBL1_DMSO_200M_050219_2,10773 HBL1_DMSO_200M_050219_2,10773,YPVKKGVPMA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10774 58.196 57.0 1576200.0 25 0 106280.0 + 38198 TPRHIIVRF 9 115 380.2327029314581 1137.6762793945743 3 380.2324706912041 MULTI CID FTMS 0 0 0 10766 776008.875 0.0603457644445578 -3 0.3335494995117187 8 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 14.218169984304629 0.4518140821082705 4 TPRH{I|L}{I|L}{M(Oxidation (M))|F}VR 9 2 + 46.468 0.0 0.0 4.0845 4.0845 69.909 0.0 0.0 0.0 35.20898692211002 9.27067703229376 9.27067703229376 3.0102999566398125 0 1.024227503252014 0.0 0.0 0.0 TPRH{I|L}{I|L}{M(Oxidation (M))|F}VR;TPRH{I|L}{M(Oxidation (M))|F}{I|L}VR;TPRH{I|L}{I|L}[RV]{M(Oxidation (M))|F};TPRH{M(Oxidation (M))|F}{I|L}{I|L}VR 4.0845;3.8199;2.8904;2.6914 -;-;+;- + 154 + 1 1.37 78844.5 1.0 6094 4678 10766 HBL1_DMSO_200M_050219_2,10774 HBL1_DMSO_200M_050219_2,10774,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10775 58.198 111.0 1019800.0 25 0 137270.0 + 1188 AIASGISGLIF 11 101 350.206684673076 1047.598224619428 3 350.2062560915947 MULTI CID FTMS 0 0 0 10766 712685.6875 0.3426734293177984 -2 0.2526054382324219 9 Unmodified _AIASGISGLIF_ REV__ENSG00000165949|ENST00000612813|IFI27;REV__nc|ENSG00000165949|P40305-1|IFI27;REV__nc|ENSG00000165949|P40305-3|IFI27;REV__nc|ENSG00000165949|P40305-4|IFI27 18.1463463914782 0.6576820063886638 4 [{I|L}A]AEKW 6 -1 53.148 0.0 0.0 5.0734 0.0 0.0 0.0 346.1872830701475 346.1872830701475 35.18954998148708 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5 0.0 [{I|L}A]AEKW 5.0734 - 104 + 1 1.37 93017.1 1.0 6095 4678 10766 HBL1_DMSO_200M_050219_2,10775 HBL1_DMSO_200M_050219_2,10775,AIASGISGLIF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10776 58.201 114.0 443080.0 25 0 62462.0 + 2950 AVHETLVAV 9 80 469.7690491115673 937.5235452899346 2 469.7682983279228 MULTI CID FTMS 0 0 0 10766 497755.125 0.4741030145473833 1 -0.1095848083496093 10 Unmodified _AVHETLVAV_ ENSG00000141873|ENST00000269740|SLC39A3 53.57557251787612 0.0325303259649373 4 {[VA]|[{I|L}G]}HET{I|L}VAV 9 0 + 58.069 0.0 0.0 6.1939 6.1939 90.598 0.0 0.0 0.0 16.901552601841594 38.683947707303616 16.901552601841594 25.24813245057536 0 0.8182503180159344 1.3979400086720375 0.8494850021680094 0.0 + + {[VA]|[{I|L}G]}HET{I|L}VAV;{[YC]|[HE]}{[VA]|[{I|L}G]}T{I|L}VAV;{[YC]|[HE]}T{[VA]|[{I|L}G]}{I|L}VAV;{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}[HT]VAV;{[QN]|[E{I|L}]|[KN]}{[VA]|[{I|L}G]}[HT]VAV 6.1939;3.5008;3.1798;2.2755;1.3647 +;-;-;-;- + 164 1 1.37 44389.1 1.0 6096 4678 10766 HBL1_DMSO_200M_050219_2,10776 HBL1_DMSO_200M_050219_2,10776,AVHETLVAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10777 58.203 92.0 763440.0 25 0 69978.0 + 24931 MPPLNTQRI 9 96 535.2953243789532 1068.5760958247065 2 535.2946655154228 MULTI CID FTMS 0 0 0 10766 392929.5625 0.8199504615754414 3 -0.2909736633300781 11 Unmodified _MPPLNTQRI_ nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078-8|MEF2A 26.268140514670165 0.1969607489560049 4 MPP{I|L}N 5 4 62.875 0.0 0.0 5.884 0.0 0.0 0.0 513.2787569635374 513.2787569635374 38.71855302839869 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + MPP{I|L}N 5.884 + + 207 + 1 1.37 62948.5 1.0 6097 4678 10766 HBL1_DMSO_200M_050219_2,10777 HBL1_DMSO_200M_050219_2,10777,MPPLNTQRI False True MPPLNTQRI 58.202783 535.294665515423 25178218.0 10766.0 nc|ENSG00000068305|Q02078-4|MEF2A;;nc|ENSG00000068305|Q02078-5|MEF2A;;nc|ENSG00000068305|Q02078-3|MEF2A;;nc|ENSG00000068305|Q02078-6|MEF2A;;nc|ENSG00000068305|Q02078-8|MEF2A 4.033228397369385 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10778 58.208 273.0 433950.0 25 0 61923.0 + 41487 VPLVGSTPL 9 109 441.7683182352048 881.5220835372097 2 441.7683288455009 MULTI CID FTMS 0 0 0 10766 360641.59375 0.4046501844404647 -26 2.2504425048828125 12 Unmodified _VPLVGSTPL_ REV__ENSG00000188162|ENST00000399397|OTOG;REV__nc|ENSG00000188162|Q6ZRI0-2|OTOG;REV__nc|ENSG00000188162|Q6ZRI0|OTOG 38.15118350030904 0.0856056900103839 4 VPVVQVE{I|L} 8 -1 + 50.191 0.0 0.0 5.6937 5.6937 81.47 0.0 0.0 0.0 33.24060497133898 0.571968632008435 0.571968632008435 6.69772782188118 0 0.7817183090963749 2.0 0.7302046884880937 0.0 VPVVQVE{I|L};[VP][KT]EP{I|L}V;[VP][KT]PE{I|L}V;[VP]P[KT]E{I|L}V;[VP]AA[{I|L}A]E{I|L}V;[KP][{I|L}T]DP{I|L}V;VVVPQVE{I|L};[KP]{[TV]|[{I|L}S]}EP{I|L}V;{[TV]|[{I|L}S]}EKPP{I|L}V;{[QN]|[E{I|L}]|[KN]}SKPP{I|L}V 5.6937;4.9339;3.8134;3.5479;2.587;2.2637;2.2601;2.0979;2.0111;1.9467 -;-;-;-;-;-;-;-;-;- 851 + 1 1.37 95257.4 1.0 6098 4678 10766 HBL1_DMSO_200M_050219_2,10778 HBL1_DMSO_200M_050219_2,10778,VPLVGSTPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10779 58.212 193.0 513550.0 25 0 64049.0 + 30313 RAAEEFVNV 9 123 517.7663143182149 1033.5180757032297 2 517.7675659060478 MULTI CID FTMS 0 0 0 10766 289344.0625 0.3521356611152591 2 -0.2224006652832031 13 Unmodified _RAAEEFVNV_ ENSG00000132661|ENST00000254998|NXT1 19.361941925380144 0.3125782356748823 4 [DV]{[NV]|[RG]}E{M(Oxidation (M))|F}VNV 9 4 + 46.419 0.0 0.0 4.4913 4.4913 79.48 0.0 0.0 0.0 10.501222959631242 29.94064848762637 10.501222959631242 9.208187539523747 0 0.6989700043360187 0.958607314841775 0.0 0.0 [DV]{[NV]|[RG]}E{M(Oxidation (M))|F}VNV;[DV]{[NV]|[RG]}E{M(Oxidation (M))|F}VGGV;[DV]{M(Oxidation (M))|F}R{[DA]|[EG]}VNV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS]PWVNV;{[DA]|[EG]}[Q{I|L}]E{M(Oxidation (M))|F}VNV;{[NV]|[RG]}[DV]E{M(Oxidation (M))|F}VNV;{[SA]|[TG]}[YV]PWVNV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS]P{[DA]|[EG]}VNV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS]PWVGGV;{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}E{M(Oxidation (M))|F}VNV 4.4913;3.6004;3.4947;3.3534;3.1433;2.69;2.6645;2.4624;2.4624;2.3988 -;-;-;-;-;-;-;-;-;- 451 1 1.37 79750.0 1.0 6099 4678 10766 HBL1_DMSO_200M_050219_2,10779 HBL1_DMSO_200M_050219_2,10779,RAAEEFVNV False True RAAEEFVNV 58.211541 517.767565906048 15373035.0 10766.0 ENSG00000132661|ENST00000254998|NXT1 4.663182020187378 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10780 58.215 189.0 457980.0 25 0 34009.0 + 15845 ISMEGTVGDA 10 116 490.2216381974274 978.4287234616548 2 490.2215759158134 MULTI CID FTMS 0 0 0 10766 265668.5625 0.6789941671984582 1 -0.1095848083496093 14 Unmodified _ISMEGTVGDA_ ENSG00000083457|ENST00000263087|ITGAE 20.453626601364224 0.5043500229302764 4 [DP]T{M(Oxidation (M))|F}ND 6 8 18.848 0.0 0.0 1.9264 0.0 0.0 0.0 286.1400021083924 286.1400021083924 7.065463475485657 0.0 0.0 0.0 0 0.0 0.0 0.5866968715561641 0.6861818737241735 [DP]T{M(Oxidation (M))|F}ND 1.9264 - 249 1 1.37 69475.8 1.0 6100 4678 10766 HBL1_DMSO_200M_050219_2,10780 HBL1_DMSO_200M_050219_2,10780,ISMEGTVGDA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10781 58.229 786.0 124310.0 25 0 7348.4 + 12312 GSERTVDKATV 11 140 581.8069743328235 1161.599395732447 2 581.8065063357353 MULTI CID FTMS 0 0 0 10766 195041.671875 0.22092533993287 2 -0.2224006652832031 15 Unmodified _GSERTVDKATV_ REV__ENSG00000123505|ENST00000368885|AMD1;REV__nc|ENSG00000123505|P17707-2|AMD1 38.61474834105838 0.2337350513322792 4 [SG]SDA{I|L}R{I|L}GSTV 12 -1 + 84.77 0.0 0.0 7.2977 7.2977 88.262 0.0 0.0 0.0 15.528198119064784 64.31263611703767 15.528198119064784 7.95880017344075 0 3.1989700043360187 0.958607314841775 1.873712505420024 0.0 [SG]SDA{I|L}R{I|L}GSTV;[SG]SDA{I|L}R[SG]{I|L}TV;[SG]SDA{I|L}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;[SG]SDA{I|L}K{[RE]|[WV]}TV;[SG]SDA{I|L}R[KT]EV;[SG]E[SG]{I|L}R{I|L}GSTV;[SG]SDA{I|L}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EV;[WC(Carbamidomethyl (C))]A{I|L}R{I|L}GSTV;{[DS]|[MA]|[CV]|TT}[SG]A{I|L}R{I|L}GSTV;[WC(Carbamidomethyl (C))]A{I|L}R[SG]{I|L}TV 7.2977;6.6126;6.3025;5.7842;5.3329;5.1878;4.8146;4.2815;3.9715;3.5963 -;-;-;-;-;-;-;-;-;- 490 1 1.37 79414.4 1.0 6101 4678 10766 HBL1_DMSO_200M_050219_2,10781 HBL1_DMSO_200M_050219_2,10781,GSERTVDKATV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10782 58.235 360.0 378450.0 25 0 90949.0 + 11343 GFLGGAKAM 9 126 426.2253419054365 850.4361308776729 2 426.2249023318291 MULTI CID FTMS 0 0 0 10766 191126.640625 0.5765647031363021 -2 0.2526054382324219 16 Unmodified _GFLGGAKAM_ ENSG00000131269|ENST00000373394|ABCB7;nc|ENSG00000131269|O75027-2|ABCB7 16.942295170755138 0.3780752226737986 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L} 3 7 21.461 0.0 0.0 2.5235 0.0 0.0 0.0 440.2255040068323 440.2255040068323 3.6190412775104193 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L} 2.5235 - 187 1 1.37 116143.8 1.0 6102 4678 10766 HBL1_DMSO_200M_050219_2,10782 HBL1_DMSO_200M_050219_2,10782,GFLGGAKAM False True GFLGGAKAM 58.235258 426.224902331829 5601302.5 10766.0 nc|ENSG00000131269|O75027-2|ABCB7;;ENSG00000131269|ENST00000373394|ABCB7 0.8693673213322958 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10783 58.249 800.0 254410.0 25 0 32159.0 + 19821 LGYSVYRTV 9 184 529.2870801582629 1056.5596073833258 2 529.2877075076103 MULTI CID FTMS 0 0 0 10766 181770.765625 0.9714171935563118 -1 0.0946197509765625 17 Unmodified _LGYSVYRTV_ ENSG00000173418|ENST00000334982|NAA20 93.16586880292088 0.0136995152735431 4 {I|L}GYSVYRS{I|L} 9 2 + 102.29 0.0 0.0 9.6819 9.6819 80.273 0.0 0.0 0.0 29.4884747755262 0.1849178312658352 0.1849178312658352 0.1849178312658352 0 1.9615005783268 1.3010299956639813 1.2440840204505517 0.2614393726401688 {I|L}GYSVYRS{I|L};{I|L}GYSVYRTV;{I|L}GYVSYRS{I|L};{I|L}GYVSYRTV;{I|L}GYSVV[YG]S{I|L};{I|L}GYSVV[YG]TV;{I|L}GYVSV[YG]S{I|L};{I|L}GYVSV[YG]TV;{I|L}GYSVVSHPV;{I|L}GYSVVSPHV 9.6819;9.6644;9.4386;9.4211;8.2822;8.2647;8.0389;8.0214;7.7945;7.7028 -;+;-;-;-;-;-;-;-;- + 3616 + 1 1.37 156153.8 0.9700000286102296 6103 4678 10766 HBL1_DMSO_200M_050219_2,10783 HBL1_DMSO_200M_050219_2,10783,LGYSVYRTV True True LGYSVYRTV 58.249089 529.28770750761 1427541.125 10766.0 ENSG00000173418|ENST00000334982|NAA20 8.615733623504639 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10784 58.263 800.0 188500.0 25 0 10542.0 17245 KLLTPGCL 8 175 422.7517002114787 0 422.8135558962822 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _KLLTPGCL_ ENST00000449886.5_1_9:129597815-129598031:+|nuORF 13.50788311687929 0.5021269579892848 4 A{I|L}{I|L} 3 6 10.177 0.0 0.0 1.2066 0.0 0.0 101.02120940557616 442.24286829166255 543.2640776972387 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}{I|L} 1.2066 - 68 + 1 1.37 129608.4 0.7900000214576721 6104 4678 10766 HBL1_DMSO_200M_050219_2,10784 HBL1_DMSO_200M_050219_2,10784,KLLTPGCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10785 58.278 800.0 129320.0 25 0 9488.6 -1 0 117 695.3510254661666 2777.374995998266 4 695.6011230349541 MULTI CID FTMS 0 0 0 10766 159517.953125 1.0 0 0.0 19 4 DQY{[HG]|PP} 5 -1 27.218 0.0 0.0 0.98001 0.0 0.0 2159.0252670052564 0.0 2159.0252670052564 0.0 19.744237387763093 0.0 0.0 0 0.5 0.0 0.0 0.0 DQY{[HG]|PP} 0.98001 - 474 1 1.37 81877.7 0.9100000262260436 6105 4678 10766 HBL1_DMSO_200M_050219_2,10785 HBL1_DMSO_200M_050219_2,10785, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10786 58.292 800.0 183220.0 25 0 22783.0 + -1 MLCSSYCPFTC 11 154 692.7578197338961 1383.501086534592 2 692.7585327029228 MULTI CID FTMS 0 0 0 10766 156092.90625 0.9385267305413186 -1 0.0946197509765625 20 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LCSSYC(Carbamidomethyl (C))PFTC(Carbamidomethyl (C))_ REV__ENST00000473637.6_1_17:80559802-80560249:+|nuORF 6.2057823575117 0.8458686499021061 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}CSADMY 8 -1 42.634 0.0 0.0 3.0816 0.0 0.0 0.0 450.1552362750796 450.1552362750796 13.763940211832008 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.2491348669726232 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}CSADMY 3.0816 - 1222 1 1.37 106962.0 0.8999999761581421 6106 4678 10766 HBL1_DMSO_200M_050219_2,10786 HBL1_DMSO_200M_050219_2,10786,MLCSSYCPFTC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10788 58.296 3.0 22583000.0 25 0 4388800.0 + 44667 YPFKPPKV 8 77 325.86056900573425 974.5598776174028 3 325.8602783083916 MULTI CID FTMS 0 0 0 10787 14546130.0 0.225426569400295 4 -0.4583053588867187 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 41.636 0.0 0.0 4.2722 4.2722 82.863 0.0 0.0 0.0 7.532832577488762 6.012969751618087 6.012969751618087 25.248132450575365 0 0.2742275032520141 0.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]KPP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};Y[{I|L}T]K[HS]KV 4.2722;1.6815;1.599;0.63242 +;-;-;- + 223 + 1 1.374 62805.8 1.0 6107 4679 10787 HBL1_DMSO_200M_050219_2,10788 HBL1_DMSO_200M_050219_2,10788,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10789 58.298 40.0 2007700.0 25 0 446840.0 + 13550 HPFHVIRI 8 85 340.2030500220915 1017.5873206664744 3 340.2024719119072 MULTI CID FTMS 0 0 0 10787 1246717.75 0.5061952922924571 2 -0.1813888549804687 2 Unmodified _HPFHVIRI_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000482732.1_1_X:153628091-153628283:+|nuORF;ENST00000489200.5_1_X:153627802-153628283:+|nuORF;ENST00000491035.5_1_X:153626749-153628283:+|nuORF 44.40701690623563 0.1655546087385432 4 HP{M(Oxidation (M))|F}HV{I|L}{I|L}R 8 2 + 67.125 0.0 0.0 6.5965 6.5965 74.307 0.0 0.0 0.0 31.55221472545078 13.901129243309557 13.901129243309557 0.0886438348021556 0 1.416386562212267 0.0 0.0 0.2887254899964357 HP{M(Oxidation (M))|F}HV{I|L}{I|L}R;{I|L}HMHV{I|L}{I|L}R;H{I|L}MHV{I|L}{I|L}R;HP{M(Oxidation (M))|F}H{I|L}V{I|L}R;{I|L}HMH{I|L}V{I|L}R;H{I|L}MH{I|L}V{I|L}R;HP{M(Oxidation (M))|F}{I|L}HV{I|L}R;{I|L}HM{I|L}HV{I|L}R;H{I|L}M{I|L}HV{I|L}R;HP{I|L}{M(Oxidation (M))|F}HV{I|L}R 6.5965;6.5878;6.5489;5.9096;5.9009;5.862;5.0234;5.0146;4.9757;4.3534 -;-;-;-;-;-;-;-;-;- 198 + 1 1.374 72377.1 1.0 6108 4679 10787 HBL1_DMSO_200M_050219_2,10789 HBL1_DMSO_200M_050219_2,10789,HPFHVIRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10790 58.299 42.0 1422500.0 25 0 231600.0 + 3315 AYLEAHETF 9 77 540.7534775417986 1079.492402150397 2 540.7535888552666 MULTI CID FTMS 0 0 0 10787 1176247.625 0.5344201943771385 2 -0.1813888549804687 3 Unmodified _AYLEAHETF_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107 53.57557251787612 0.0325303259649373 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}TE 7 5 60.684 0.0 0.0 5.6215 0.0 0.0 0.0 205.07341943912343 205.07341943912343 32.306430838460386 0.0 0.0 0.0 0 0.805462187404089 2.0 1.5189301784845295 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}TE 5.6215 - 819 + 1 1.374 52278.2 1.0 6109 4679 10787 HBL1_DMSO_200M_050219_2,10790 HBL1_DMSO_200M_050219_2,10790,AYLEAHETF True True AYLEAHETF 58.29882 540.753588855267 36037956.0 10787.0 ENSG00000111581|ENST00000229179|NUP107;;nc|ENSG00000111581|P57740-3|NUP107;;nc|ENSG00000111581|P57740-2|NUP107 7.372917493184407 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10791 58.3 41.0 1724100.0 25 0 249200.0 + 4546 DAYPQRIKF 9 69 569.3061034210313 1136.5976539088624 2 569.3060180544853 MULTI CID FTMS 0 0 0 10787 774893.5625 0.3132094157215537 -2 0.2042045593261718 4 Unmodified _DAYPQRIKF_ ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13753187-13770868:+|nuORF;nc|ENSG00000046651|O75665-2|OFD1;nc|ENSG00000046651|O75665-3|OFD1 21.59015148037692 0.2564810811560323 4 {[DA]|[EG]}Y 3 6 26.171 0.0 0.0 2.3026 0.0 0.0 0.0 784.4476044305999 784.4476044305999 12.498774732165996 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}Y 2.3026 + + 29 1 1.374 59939.7 1.0 6110 4679 10787 HBL1_DMSO_200M_050219_2,10791 HBL1_DMSO_200M_050219_2,10791,DAYPQRIKF False True DAYPQRIKF 58.300005 569.306018054485 37698600.0 10787.0 nc|ENSG00000046651|O75665-3|OFD1;;nc|ENSG00000046651|O75665-2|OFD1;;ENSG00000046651|ENST00000340096|OFD1;;ENST00000490265.5_1_X:13753187-13770868:+|nuORF 3.0533929963906608 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10792 58.303 128.0 520110.0 25 0 36660.0 -1 YLFYCKNCRFY 11 80 788.8549205105439 1575.6952880878878 2 788.8556396365166 MULTI CID FTMS 0 0 0 10787 495229.21875 0.5224839059434115 -2 0.2042045593261718 5 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 4 {[QN]|[E{I|L}]|[KN]}A[YK]MAQQNA{M(Oxidation (M))|F}Y 13 -1 + 77.811 0.0 0.0 4.9382 4.9382 79.994 0.0 0.0 0.0 0.3167623876292254 51.39207467799251 0.3167623876292254 9.072459467631006 0 0.8182503180159344 0.0 0.0 2.615356566548286 {[QN]|[E{I|L}]|[KN]}A[YK]MAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SMAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[CS]{[NV]|[RG]}AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAEEHQ{I|L}{I|L}NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SMA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SMAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SMAQQGGA{M(Oxidation (M))|F}Y 4.9382;4.3624;4.3624;4.3624;4.3343;4.2931;3.9789;3.7585;3.7585;3.7585 -;-;-;-;-;-;-;-;-;- 1735 1 1.374 51468.2 1.0 6111 4679 10787 HBL1_DMSO_200M_050219_2,10792 HBL1_DMSO_200M_050219_2,10792,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10793 58.305 86.0 946650.0 25 0 59748.0 21708 LPLSFHELL 9 100 534.8067729392013 1067.5989929452026 2 534.8057739138603 MULTI CID FTMS 0 0 0 10787 434357.03125 0.1688886487357663 -2 0.2042045593261718 6 Unmodified _LPLSFHELL_ ENST00000396969.8_1_19:14638565-14640081:-|nuORF;ENST00000594099.5_2_19:14638565-14640206:-|nuORF;ENST00000595992.5_2_19:14638565-14640081:-|nuORF;ENST00000596853.5_2_19:14638565-14639960:-|nuORF 26.88365393820708 0.1891292719743517 4 {I|L}PYQ 4 7 50.918 0.0 0.0 4.7694 0.0 0.0 0.0 563.2931002252561 563.2931002252561 33.44335023848103 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}PYQ 4.7694 - 293 + 1 1.374 71462.3 1.0 6112 4679 10787 HBL1_DMSO_200M_050219_2,10793 HBL1_DMSO_200M_050219_2,10793,LPLSFHELL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10794 58.307 94.0 591220.0 25 0 118950.0 + 11033 GAYDGEEHLI 10 83 552.2536489321835 1102.492744931167 2 552.2538329958916 MULTI CID FTMS 0 0 0 10787 458618.65625 0.487847230301782 2 -0.1813888549804687 7 Unmodified _GAYDGEEHLI_ ENSG00000214107|ENST00000397548|MAGEB1 39.957323273325 0.1580177220464651 4 [AG]YDWEH 7 4 46.621 0.0 0.0 4.2287 0.0 0.0 0.0 241.1550387018188 241.1550387018188 20.255062119731573 0.0 0.0 0.0 0 0.5629529932484498 1.5228787452803376 0.3807196863200844 0.0 [AG]YDWEH 4.2287 - 490 + 1 1.374 49876.1 1.0 6113 4679 10787 HBL1_DMSO_200M_050219_2,10794 HBL1_DMSO_200M_050219_2,10794,GAYDGEEHLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10795 58.309 113.0 765630.0 25 0 88977.0 -1 0 105 318.19664923749616 634.3787455417923 2 318.1952087283134 MULTI CID FTMS 0 0 0 10787 495738.5625 0.0416122823069223 7 -0.7907905578613281 8 4 T 1 -1 4.7539 0.0 0.0 0.74938 0.0 0.0 335.2052402282784 195.10335718326408 530.3085974115425 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 T 0.74938 - 3 + 1 1.374 72932.6 1.0 6114 4679 10787 HBL1_DMSO_200M_050219_2,10795 HBL1_DMSO_200M_050219_2,10795, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10796 58.313 213.0 485350.0 25 0 63688.0 16796 KGLGGTRH 8 119 413.2385038065141 824.4624546798283 2 413.2383605837822 MULTI CID FTMS 0 0 0 10787 377762.625 0.700362023153584 7 -0.7907905578613281 9 Unmodified _KGLGGTRH_ ENST00000305850.9_1_16:81040200-81040455:+|nuORF 2.302733041254933 0.8103549651115762 4 {I|L} 1 7 11.783 0.0 0.0 1.4291 0.0 0.0 693.367359930608 0.0 693.367359930608 0.0 4.018526774280158 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4291 + + 13 + 1 1.374 86272.2 1.0 6115 4679 10787 HBL1_DMSO_200M_050219_2,10796 HBL1_DMSO_200M_050219_2,10796,KGLGGTRH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10797 58.315 71.0 670510.0 25 0 84882.0 -1 LQSCVECLS 9 94 548.243825459559 1094.473097985918 2 548.2438232302666 MULTI CID FTMS 0 0 0 10787 349037.9375 0.7735905981280422 -1 0.1095848083496093 10 2 Carbamidomethyl (C) _LQSC(Carbamidomethyl (C))VEC(Carbamidomethyl (C))LS_ ENSG00000119397|ENST00000373855|CNTRL;nc|ENSG00000119397|Q7Z7A1-2|CNTRL;nc|ENSG00000119397|Q7Z7A1-3|CNTRL;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 15.847184025352805 0.4077185912009129 4 [Q{I|L}]S[HQ]QV 7 -1 23.261 0.0 0.0 2.1253 0.0 0.0 0.0 271.041188156093 271.041188156093 3.2690730852079994 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.2614393726401688 0.5796896906561032 [Q{I|L}]S[HQ]QV 2.1253 - 245 1 1.374 43089.9 1.0 6116 4679 10787 HBL1_DMSO_200M_050219_2,10797 HBL1_DMSO_200M_050219_2,10797,LQSCVECLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10798 58.329 800.0 117840.0 25 0 26298.0 -1 0 62 1126.4453153007007 3376.3141165023026 3 1127.113696277142 MULTI CID FTMS 0 0 0 10787 311334.21875 0.4973600619674794 2 -0.1813888549804687 11 4 {I|L}TM 3 -1 19.481 0.0 0.0 0.577 0.0 0.0 2456.900836259407 571.2186983697874 3028.1195346291943 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {I|L}TM 0.577 - 87 + 1 1.374 86338.1 0.959999978542328 6117 4679 10787 HBL1_DMSO_200M_050219_2,10798 HBL1_DMSO_200M_050219_2,10798, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10799 58.331 115.0 472910.0 25 0 31001.0 + 21752 LPMGSIKNV 9 97 479.77317650672495 957.53180008025 2 479.7727844119072 MULTI CID FTMS 0 0 0 10787 310457.40625 0.1843205035638331 2 -0.1813888549804687 12 Unmodified _LPMGSIKNV_ ENSG00000103353|ENST00000395878|UBFD1;ENST00000563366.5_1_16:23573052-23581908:+|nuORF;ENST00000603335.1_1_4:78033720-78034596:-|nuORF 29.081581746732265 0.1611639662936252 4 {I|L}PM 3 6 40.846 0.0 0.0 4.2658 0.0 0.0 0.0 613.3301485650999 613.3301485650999 22.090606190045108 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 0.0 0.0 + {I|L}PM 4.2658 + + 77 + 1 1.374 45660.0 1.0 6118 4679 10787 HBL1_DMSO_200M_050219_2,10799 HBL1_DMSO_200M_050219_2,10799,LPMGSIKNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10800 58.335 238.0 303290.0 25 0 30795.0 + 16841 KIATEKDFLEA 11 109 632.8437736162754 1263.6729942993506 2 632.8424560427666 MULTI CID FTMS 0 0 0 10787 290114.875 1.0 0 0.0 13 Unmodified _KIATEKDFLEA_ ENSG00000161057|ENST00000292644|PSMC2;nc|ENSG00000161057|P35998-2|PSMC2 33.59337547418096 0.3110868263875379 4 K{I|L}A{M(Oxidation (M))|F}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WD]K 10 7 + 49.222 0.0 0.0 3.8952 3.8952 71.594 0.0 0.0 0.0 30.15392349177978 3.7751372576825295 3.7751372576825295 4.357860450397098 0 0.6139829889124311 0.744727494896694 0.5 0.0 K{I|L}A{M(Oxidation (M))|F}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WD]K;K{I|L}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM}[Q{I|L}]S[VP];K{I|L}A{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))R][DN]K;K{I|L}A{M(Oxidation (M))|F}{I|L}[W{I|L}][MD]K;K{I|L}A{M(Oxidation (M))|F}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[NV]|[RG]}{[ES]|[DT]|[{I|L}C]};K{I|L}A{M(Oxidation (M))|F}{I|L}[W{I|L}][{I|L}A][CS];K{I|L}A{M(Oxidation (M))|F}[HS]D[YR]K;K{I|L}A{M(Oxidation (M))|F}{I|L}[W{I|L}]{[SA]|[TG]}{[ES]|[DT]|[{I|L}C]};[K{I|L}]A{[ET]|[MV]}{[{M(Oxidation (M))|F}D]|MM}ERR;[NS]P[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{I|L}E[K{I|L}]A 3.8952;3.5503;3.2794;3.1805;3.0084;2.869;2.6274;2.2937;1.7094;1.4845 -;-;-;-;-;-;-;-;-;- 586 + 1 1.374 61757.4 1.0 6119 4679 10787 HBL1_DMSO_200M_050219_2,10800 HBL1_DMSO_200M_050219_2,10800,KIATEKDFLEA False True KIATEKDFLEA 58.335438 632.842456042767 2405164.75 10787.0 nc|ENSG00000161057|P35998-2|PSMC2;;ENSG00000161057|ENST00000292644|PSMC2 5.219809532165527 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10801 58.338 141.0 296600.0 25 0 22538.0 14838 ILFYYFPL 8 90 538.2978194603375 1074.5810859874748 2 538.2989379763603 MULTI CID FTMS 0 0 0 10787 267391.34375 0.0460292890628785 4 -0.4583053588867187 14 Unmodified _ILFYYFPL_ ENST00000452825.7_2_X:53221315-53221459:-|nuORF 11.114462752807354 0.7467182956244686 4 [TP]SVVA{M(Oxidation (M))|F} 7 8 17.941 0.0 0.0 1.6696 0.0 0.0 0.0 370.16492322796233 370.16492322796233 4.84189732636592 0.0 0.0 0.0 0 0.0 0.0 1.0941876774005248 0.0 [TP]SVVA{M(Oxidation (M))|F} 1.6696 - 153 1 1.374 37034.5 1.0 6120 4679 10787 HBL1_DMSO_200M_050219_2,10801 HBL1_DMSO_200M_050219_2,10801,ILFYYFPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10802 58.343 273.0 247100.0 25 0 52178.0 + 18485 KYMNNITYY 9 93 605.2839184675458 1208.5532840018916 2 605.2839233279228 MULTI CID FTMS 0 0 0 10787 251343.171875 1.0 0 0.0 15 Unmodified _KYMNNITYY_ ENSG00000155506|ENST00000518297|LARP1;nc|ENSG00000155506|Q6PKG0-3|LARP1 46.020951573049366 0.0490941689151868 4 [YT]EEK{I|L}TYY 9 4 + 77.074 0.0 0.0 6.3774 6.3774 81.754 0.0 0.0 0.0 4.751867549424631 16.478174818886373 4.751867549424631 4.751867549424631 0 0.9247425010840048 2.0 0.5 1.3494850021680094 [YT]EEK{I|L}TYY;{NN|[MP]|[D{I|L}]|[EV]}MYK{I|L}TYY;[PG][CS]T{I|L}KEE[{M(Oxidation (M))|F}V];[PG][CS]T{I|L}{NN|[MP]|[D{I|L}]|[EV]}W{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}VS{[MS]|[{M(Oxidation (M))|F}A]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YY;[VS]{I|L}S{[MS]|[{M(Oxidation (M))|F}A]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YY;[PG][QP]{I|L}WWYY;[VS]VT{[MS]|[{M(Oxidation (M))|F}A]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YY;[{I|L}A]TT{[MS]|[{M(Oxidation (M))|F}A]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YY;[PG][YQ]{I|L}{NN|[MP]|[D{I|L}]|[EV]}W{[MS]|[{M(Oxidation (M))|F}A]} 6.3774;5.9842;2.6017;2.2069;1.4487;1.4487;1.3975;1.3278;0.93302;0.87875 -;-;-;-;-;-;-;-;-;- 245 1 1.374 50916.2 1.0 6121 4679 10787 HBL1_DMSO_200M_050219_2,10802 HBL1_DMSO_200M_050219_2,10802,KYMNNITYY True True KYMNNITYY 58.34333 605.283923327923 2115158.75 10787.0 ENSG00000155506|ENST00000518297|LARP1;;nc|ENSG00000155506|Q6PKG0-3|LARP1 5.158284346262614 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10803 58.358 800.0 192060.0 25 0 16342.0 + 36387 SYQIPTENSM 10 142 585.2607905889962 1168.5070282447923 2 585.2601806521416 MULTI CID FTMS 0 0 0 10787 173188.21875 0.5469034361222004 -2 0.2042045593261718 16 Unmodified _SYQIPTENSM_ ENSG00000046604|ENST00000261590|DSG2 67.83816525789305 0.0190062514522628 4 [TP]ENSM 6 4 46.641 0.0 0.0 3.9915 0.0 0.0 0.0 506.2261804266861 506.2261804266861 3.2637177310166123 0.0 0.0 0.0 0 0.0 0.958607314841775 1.425833702434617 0.5796896906561032 + [TP]ENSM 3.9915 + + 969 1 1.374 114350.8 0.9200000166893004 6122 4679 10787 HBL1_DMSO_200M_050219_2,10803 HBL1_DMSO_200M_050219_2,10803,SYQIPTENSM True True SYQIPTENSM 58.358336 585.260180652142 2461224.0 10787.0 ENSG00000046604|ENST00000261590|DSG2 6.748154322306315 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10804 58.372 800.0 453120.0 25 0 45155.0 + 39963 VGAPKIPSV 9 235 434.2684229670007 866.5222930008014 2 434.2682067751884 MULTI CID FTMS 0 0 0 10787 166806.25 0.9405624379417862 2 -0.1813888549804687 17 Unmodified _VGAPKIPSV_ ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6 47.74868867922204 0.0453060283459952 4 [VG]{I|L}{I|L}KEQ 7 6 38.68 0.0 0.0 4.4638 0.0 0.0 0.0 96.04356920613262 96.04356920613262 4.811914232524252 0.0 0.0 0.0 0 0.3921590589602531 1.5228787452803376 0.7302046884880937 0.0 [VG]{I|L}{I|L}KEQ 4.4638 - 1279 1 1.374 277644.6 0.7400000095367432 6123 4679 10787 HBL1_DMSO_200M_050219_2,10804 HBL1_DMSO_200M_050219_2,10804,VGAPKIPSV True True VGAPKIPSV 58.372151 434.268206775188 3325761.75 10787.0 ENSG00000124587|ENST00000304611|PEX6;;nc|ENSG00000124587|Q13608-3|PEX6 3.439342180887858 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10805 58.376 202.0 222120.0 25 0 12058.0 + -1 LAVCRAPG 8 78 422.2295839966533 0 422.2290527224541 PEAK CID FTMS 0 0 0 10787 169457.25 1.0 0 0.0 18 Carbamidomethyl (C) _LAVC(Carbamidomethyl (C))RAPG_ REV__ENSG00000174373|ENST00000680220|RALGAPA1;REV__ENST00000443361.1_1_9:108285096-108287232:+|nuORF;REV__nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;REV__nc|ENSG00000174373|Q6GYQ0|RALGAPA1 6.354104778181461 0.5763711549229614 4 AA 2 -1 9.464 0.0 0.0 1.1234 0.0 0.0 114.0259574001105 583.3270968072874 697.3530542073979 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AA 1.1234 - 27 + 1 1.374 48134.9 1.0 6124 4679 10787 HBL1_DMSO_200M_050219_2,10805 HBL1_DMSO_200M_050219_2,10805,LAVCRAPG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10806 58.391 800.0 273740.0 25 0 17913.0 + 2051 APLPPHLPGA 10 206 485.28038741110686 968.5462218890136 2 485.2811767458916 MULTI CID FTMS 0 0 0 10787 142055.296875 0.5685174206084758 5 -0.5236587524414062 19 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 40.44857923139169 0.1528301697436547 4 [PA]{I|L}DSQ{I|L}{I|L}{I|L} 9 6 + 34.638 0.0 0.0 3.5763 3.5763 62.989 0.0 0.0 0.0 0.2625246220192423 0.2625246220192423 0.2625246220192423 0.2625246220192423 0 1.2856668758921828 1.3979400086720375 0.0 0.0 [PA]{I|L}DSQ{I|L}{I|L}{I|L};[PA]{I|L}[Y{I|L}]PA[QP];[PA]{I|L}D{I|L}NT{I|L}{I|L};[PA]{I|L}DKPC{I|L}{I|L};[PA]{I|L}D{I|L}V[WR];[PA]{I|L}DS[AG]{I|L}{I|L}{I|L};[PA]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PC{I|L}{I|L};[{I|L}P]HP{I|L}PA[QP];[PA]{I|L}DA[VG]T{I|L}{I|L};[{I|L}P]A[Y{I|L}]PA[QP] 3.5763;3.5492;3.227;3.0837;2.7872;2.6256;2.6083;2.4654;2.3291;2.2889 -;-;-;-;-;-;-;-;-;- 1214 + 1 1.374 165559.4 0.7300000190734863 6125 4679 10787 HBL1_DMSO_200M_050219_2,10806 HBL1_DMSO_200M_050219_2,10806,APLPPHLPGA False True APLPPHLPGA 58.390982 485.281176745892 6430532.5 10787.0 LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 5.343087196350098 2.0 True 10.0 False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 10807 58.405 800.0 55979.0 25 0 2098.8 -1 0 90 835.9196815825794 1669.8248102319587 2 836.4210082888603 MULTI CID FTMS 0 0 0 10787 118057.375 1.0 0 0.0 20 4 [VG]A[DG]ANV 8 -1 37.655 0.0 0.0 2.255 0.0 0.0 0.0 983.4778402597528 983.4778402597528 18.658953319383272 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.3252574989159953 0.6139829889124311 [VG]A[DG]ANV 2.255 - 348 1 1.374 35481.6 0.6499999761581421 6126 4679 10787 HBL1_DMSO_200M_050219_2,10807 HBL1_DMSO_200M_050219_2,10807, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10809 58.409 15.0 3705100.0 25 0 390280.0 + 44678 YPFKPPKV 8 71 488.2868778785377 974.5592028238756 2 488.2867309451103 MULTI CID FTMS 0 0 0 10808 3167099.0 0.1041551919756639 5 -0.5739326477050781 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 34.10243960390752 0.3329570729325616 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 67.074 0.0 0.0 6.8825 6.8825 94.23 0.0 0.0 0.0 31.33320315820835 6.456292312303816 6.456292312303816 50.814704167158325 0 0.805462187404089 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6.8825;1.6684 +;- + 114 + 1 1.374 48352.4 1.0 6127 4680 10808 HBL1_DMSO_200M_050219_2,10809 HBL1_DMSO_200M_050219_2,10809,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10810 58.41 7.9 7525800.0 25 0 1143300.0 + 1380 ALAEKFKEL 9 78 524.8050830033019 1047.5956130734037 2 524.8055297732353 MULTI CID FTMS 0 0 0 10808 7622753.5 1.0 0 0.0 2 Unmodified _ALAEKFKEL_ ENSG00000124541|ENST00000244496|RRP36;nc|ENSG00000124541|Q96EU6-2|RRP36 61.60191391372663 0.0251951588191061 4 A{I|L}AEK{M(Oxidation (M))|F} 6 3 89.201 0.0 0.0 8.5148 0.0 0.0 0.0 385.2092074029906 385.2092074029906 49.17780549770299 0.0 0.0 0.0 0 1.6989700043360187 2.0 0.805462187404089 0.0 + A{I|L}AEK{M(Oxidation (M))|F} 8.5148 + + 511 + 1 1.374 49998.8 1.0 6128 4680 10808 HBL1_DMSO_200M_050219_2,10810 HBL1_DMSO_200M_050219_2,10810,ALAEKFKEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10811 58.412 9.7 5320900.0 25 0 425580.0 + 7556 EIIRQLNGV 9 89 521.3059899478449 1040.5974269624896 2 521.3065063357353 MULTI CID FTMS 0 0 0 10808 5600585.0 1.0 0 0.0 3 Unmodified _EIIRQLNGV_ ENST00000513761.5_1_4:170542142-170557087:+|nuORF 126.56589448801844 0.0036077350702044 4 {[QN]|[E{I|L}]|[KN]}{I|L}RQ{I|L}NGV 9 0 + 81.331 0.0 0.0 7.8158 7.8158 91.5 0.0 0.0 0.0 26.98515608797898 48.33810423563668 26.98515608797898 9.208187539523747 0 1.837180496500464 2.0 2.5669015600442577 0.0 + + {[QN]|[E{I|L}]|[KN]}{I|L}RQ{I|L}NGV;{[QN]|[E{I|L}]|[KN]}{I|L}R[AG]{I|L}NGV;{[QN]|[E{I|L}]|[KN]}{I|L}RQ{I|L}GGGV;[VG]N[K{I|L}]Q{I|L}NGV;[QP][KA][KS]{I|L}NGV;[VG]N[K{I|L}][AG]{I|L}NGV;[VG]N[K{I|L}]Q{I|L}GGGV;[AG]P[KA][KS]{I|L}NGV;[NG]V[K{I|L}]Q{I|L}NGV;[VG]GG[K{I|L}]Q{I|L}NGV 7.8158;6.9309;6.9309;4.2893;3.6093;3.4086;3.4086;3.2041;3.0075;3.0004 +;-;-;-;-;-;-;-;-;- + 238 1 1.374 47110.3 1.0 6129 4680 10808 HBL1_DMSO_200M_050219_2,10811 HBL1_DMSO_200M_050219_2,10811,EIIRQLNGV True True EIIRQLNGV 58.411625 521.306506335735 38718588.0 10808.0 ENST00000513761.5_1_4:170542142-170557087:+|nuORF 6.927495002746582 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10812 58.413 16.0 3219600.0 25 0 243370.0 + 22116 LPPPVQTQI 9 88 496.7926827535134 991.5708125738269 2 496.7924987673759 MULTI CID FTMS 0 0 0 10808 3081015.5 0.7716750109921183 -2 0.2224006652832031 4 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 71.13359017698441 0.0206607516130725 4 [{I|L}P][NP]P{I|L}TQ{I|L} 9 3 + 61.212 0.0 0.0 6.1732 6.1732 86.313 0.0 0.0 0.0 11.020599913279623 16.478174818886373 11.020599913279623 9.208187539523747 0 0.7887254899964358 2.0 0.5 0.3252574989159953 [{I|L}P][NP]P{I|L}TQ{I|L};[{I|L}P][NP]P{I|L}T[AG]{I|L};[VP]PP{I|L}QTQ{I|L};{[HG]|PP}VP{I|L}QTQ{I|L};[VP]PPQ{I|L}TQ{I|L};{[HG]|PP}VPQ{I|L}TQ{I|L};[VP]PQP{I|L}TQ{I|L};[VP]PP{I|L}QT[AG]{I|L};{[HG]|PP}VQP{I|L}TQ{I|L};{[HG]|PP}VP{I|L}QT[AG]{I|L} 6.1732;5.2446;5.0618;4.838;4.7582;4.5344;4.277;4.1331;4.0533;3.9094 -;-;-;-;-;-;-;-;-;- 753 1 1.374 43376.4 1.0 6130 4680 10808 HBL1_DMSO_200M_050219_2,10812 HBL1_DMSO_200M_050219_2,10812,LPPPVQTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10813 58.414 23.0 2229200.0 25 0 296440.0 + -1 EPSLICSC 8 75 483.20656199592935 964.3985710586588 2 483.2070800662041 MULTI CID FTMS 0 0 0 10808 2415824.75 0.9583959152551518 -1 0.1128158569335937 5 2 Carbamidomethyl (C) _EPSLIC(Carbamidomethyl (C))SC(Carbamidomethyl (C))_ REV__ENST00000367409.8_1_1:197061115-197062200:-|nuORF 19.438996006549623 0.6237395211498085 4 {[QG]|[NA]}{I|L} 3 -1 32.319 0.0 0.0 3.3512 0.0 0.0 0.0 663.2142428033811 663.2142428033811 -3.3424440917961107 0.0 -3.3424440917961107 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QG]|[NA]}{I|L} 3.3512 - 54 + 1 1.374 45945.4 1.0 6131 4680 10808 HBL1_DMSO_200M_050219_2,10813 HBL1_DMSO_200M_050219_2,10813,EPSLICSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10814 58.415 25.0 2331300.0 25 0 213470.0 + 21482 HPGPLLQV 8 86 430.75284553218125 859.4911381311625 2 430.7529785037041 MULTI CID FTMS 0 0 0 10808 2332107.5 0.6502816444368383 1 -0.068572998046875 6 Unmodified _LPHPGLQV_ ENST00000585058.1_1_17:29850640-29851216:+|nuORF 42.96799951952854 0.1846367511955703 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP{I|L}QV 8 3 + 53.562 0.0 0.0 6.2318 6.2318 79.383 0.0 0.0 0.0 10.0552339309072 48.4116789037402 10.0552339309072 3.4645289853159085 0 0.9517188504113846 0.0 0.5451140161145328 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP{I|L}QV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GPQ{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}P{I|L}QV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GQP{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}PQ{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP{I|L}[AG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}QP{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GP{I|L}{I|L}QV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}GP[AG]{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}P{I|L}[AG]V 6.2318;5.8287;5.7376;5.3514;5.3346;5.1542;4.8572;4.8258;4.7511;4.66 -;-;-;-;-;-;-;-;-;- 276 1 1.374 49087.1 1.0 6132 4680 10808 HBL1_DMSO_200M_050219_2,10814 HBL1_DMSO_200M_050219_2,10814,LPHPGLQV False True HPGPLLQV 58.415161 430.752978503704 36962928.0 10808.0 ENST00000585058.1_1_17:29850640-29851216:+|nuORF 5.558204174041748 2.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10815 58.416 32.0 1870000.0 25 0 308640.0 + 21307 LPEPSIRSV 9 65 499.2875991042045 996.560645275209 2 499.2874938845634 MULTI CID FTMS 0 0 0 10808 1563722.625 0.6792004969814954 -3 0.3170204162597656 7 Unmodified _LPEPSIRSV_ ENSG00000100077|ENST00000324198|GRK3;ENSG00000173020|ENST00000308595|GRK2 24.99096001346401 0.2132109383330889 4 {I|L}PEP 4 5 59.909 0.0 0.0 6.0116 0.0 0.0 0.0 557.3045748346311 557.3045748346311 43.94016261540408 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.4247425010840047 0.0 + {I|L}PEP 6.0116 + + 27 + 1 1.374 51648.1 1.0 6133 4680 10808 HBL1_DMSO_200M_050219_2,10815 HBL1_DMSO_200M_050219_2,10815,LPEPSIRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10816 58.418 51.0 1049600.0 25 0 154530.0 + 38960 TVPDEIQEV 9 80 515.2584290372049 1028.5023051412095 2 515.2588378787041 MULTI CID FTMS 0 0 0 10808 994499.5625 0.4970197542949653 1 -0.068572998046875 8 Unmodified _TVPDEIQEV_ ENSG00000103657|ENST00000443617|HERC1;ENST00000560519.1_1_15:64026898-64041594:-|nuORF 36.04419817259434 0.0971720506436186 4 {NN|[MP]|[D{I|L}]|[EV]}EPQE 6 5 47.998 0.0 0.0 4.6668 0.0 0.0 0.0 314.1724593810233 314.1724593810233 19.820370714040703 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9124379954164592 0.0 {NN|[MP]|[D{I|L}]|[EV]}EPQE 4.6668 - 269 1 1.374 47101.0 1.0 6134 4680 10808 HBL1_DMSO_200M_050219_2,10816 HBL1_DMSO_200M_050219_2,10816,TVPDEIQEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10817 58.419 59.0 914200.0 25 0 70682.0 -1 FYEWECKQRMR 11 80 824.8708936553912 1647.7272343775824 2 825.3724243044853 MULTI CID FTMS 0 0 0 10808 779839.5 1.0 0 0.0 9 Carbamidomethyl (C),Oxidation (M) _FYEWEC(Carbamidomethyl (C))KQRM(Oxidation (M))R_ ENSG00000120658|ENST00000690772|ENOX1;nc|ENSG00000120658|Q8TC92-2|ENOX1 0.3506318815782774 0.8734936314171269 4 [YQ][KA]WCQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 13 -1 + 55.57 0.0 0.0 3.3725 3.3725 62.217 0.0 0.0 0.0 0.0962739964636938 6.008430759637164 0.0962739964636938 0.0962739964636938 0 0.3807196863200844 0.0 0.0 1.4308845489566888 [YQ][KA]WCQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YVWCQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[YQ][KA]DACQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YVDACQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[YQ][WK]ACQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[YQ][KA]WC[AG]NA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[YQ][KA]WCQGGA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YVWCQGGA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YVWC[AG]NA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]};[YQ][KA]DAC[AG]NA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 3.3725;3.3667;3.305;3.2991;2.9003;2.8219;2.8219;2.8161;2.8161;2.7557 -;-;-;-;-;-;-;-;-;- 896 1 1.374 46321.6 1.0 6135 4680 10808 HBL1_DMSO_200M_050219_2,10817 HBL1_DMSO_200M_050219_2,10817,FYEWECKQRMR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10818 58.421 83.0 600780.0 25 0 123480.0 + 41272 VPHGGFANI 9 98 456.23988602702593 910.465219120852 2 456.2401000857353 MULTI CID FTMS 0 0 0 10808 631349.0 1.0 0 0.0 10 Unmodified _VPHGGFANI_ ENSG00000085382|ENST00000262903|HACE1;nc|ENSG00000085382|Q8IYU2-2|HACE1;nc|ENSG00000085382|Q8IYU2-3|HACE1;nc|ENSG00000085382|Q8IYU2-4|HACE1 40.44857923139169 0.0729940656229577 4 TDAPVN{I|L} 7 7 41.165 0.0 0.0 4.5213 0.0 0.0 182.1061726300797 0.0 182.1061726300797 0.0 29.90544766465387 0.0 0.0 0 0.75 0.0 0.0 0.0 TDAPVN{I|L} 4.5213 - 713 1 1.374 43890.1 1.0 6136 4680 10808 HBL1_DMSO_200M_050219_2,10818 HBL1_DMSO_200M_050219_2,10818,VPHGGFANI True True VPHGGFANI 58.421038 456.240100085735 5930046.0 10808.0 ENSG00000085382|ENST00000262903|HACE1;;nc|ENSG00000085382|Q8IYU2-4|HACE1;;nc|ENSG00000085382|Q8IYU2-3|HACE1;;nc|ENSG00000085382|Q8IYU2-2|HACE1 5.586038907368978 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10819 58.422 55.0 855340.0 25 0 82478.0 + 21046 LPADIKESI 9 83 493.2820554052311 984.5495578772624 2 493.2821838259697 MULTI CID FTMS 0 0 0 10808 553965.4375 0.7135187556693021 1 -0.068572998046875 11 Unmodified _LPADIKESI_ ENSG00000165630|ENST00000378572|PRPF18 23.78978130925829 0.2284941198415988 4 {I|L}PAD{I|L}MRAV 9 4 + 66.736 0.0 0.0 6.7783 6.7783 79.855 0.0 0.0 0.0 27.874336192996267 2.688453122925808 2.688453122925808 2.688453122925808 0 0.805462187404089 1.6989700043360187 0.0 0.0 {I|L}PAD{I|L}MRAV;{I|L}PAD{I|L}MRG{I|L};{I|L}PW{I|L}MRAV;{I|L}PW{I|L}MRG{I|L} 6.7783;6.5053;6.1203;5.8473 -;-;-;- 236 + 1 1.374 40688.6 1.0 6137 4680 10808 HBL1_DMSO_200M_050219_2,10819 HBL1_DMSO_200M_050219_2,10819,LPADIKESI False True LPADIKESI 58.422436 493.28218382597 7253387.5 10808.0 ENSG00000165630|ENST00000378572|PRPF18 3.299444725116094 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10820 58.425 115.0 643460.0 25 0 91634.0 + 15177 IPDGGVHIV 9 83 453.75586230180863 905.4971716704172 2 453.7556335330009 MULTI CID FTMS 0 0 0 10808 524534.5625 0.7181118428280653 2 -0.2177467346191406 12 Unmodified _IPDGGVHIV_ ENSG00000244462|ENST00000374114|RBM12;ENST00000352393.8_2_20:34220804-34246883:-|nuORF;ENST00000440240.5_1_20:34220804-34252800:-|nuORF;ENST00000454607.5_1_20:34220607-34246883:-|nuORF 36.04419817259434 0.0971720506436186 4 {I|L}PD{[NV]|[RG]}H{I|L}V 8 2 + 56.659 0.0 0.0 6.2572 6.2572 91.953 0.0 0.0 0.0 30.94561092171339 10.529324278304912 10.529324278304912 56.65894843955704 0 1.0283773187068794 1.3010299956639813 0.0 0.0 {I|L}PD{[NV]|[RG]}H{I|L}V 6.2572 - 191 + 1 1.374 62128.7 1.0 6138 4680 10808 HBL1_DMSO_200M_050219_2,10820 HBL1_DMSO_200M_050219_2,10820,IPDGGVHIV True True IPDGGVHIV 58.42484 453.755633533001 19999736.0 10808.0 ENST00000454607.5_1_20:34220607-34246883:-|nuORF;;ENST00000440240.5_1_20:34220804-34252800:-|nuORF;;ENSG00000244462|ENST00000374114|RBM12;;ENST00000352393.8_2_20:34220804-34246883:-|nuORF 3.737627665201823 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10821 58.428 134.0 509500.0 25 0 44143.0 + 29173 QFYDNKGITY 10 93 624.7984229598308 1247.5822929864614 2 624.7986328005791 MULTI CID FTMS 0 0 0 10808 481074.21875 0.2313370656126505 -2 0.2224006652832031 13 Unmodified _QFYDNKGITY_ ENSG00000152455|ENST00000354919|SUV39H2;nc|ENSG00000152455|Q9H5I1-2|SUV39H2;nc|ENSG00000152455|Q9H5I1-3|SUV39H2 36.506200033944 0.1944608063770638 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F}S[RH]TY 9 5 + 45.516 0.0 0.0 3.6483 3.6483 70.174 0.0 0.0 0.0 12.931576817365432 7.157111114856733 7.157111114856733 3.979400086720368 0 0.3054621874040891 1.5228787452803376 0.6139829889124311 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F}S[RH]TY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YD{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}TY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{[RE]|[WV]}{[QN]|[E{I|L}]|[KN]}TY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RNYTK[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}G{I|L}DYTQ[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}G{I|L}DYTK[Y{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R[YE]{[QN]|[E{I|L}]|[KN]}TY;{[QN]|[E{I|L}]|[KN]}G{I|L}[PA]NDY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}G{I|L}YS{M(Oxidation (M))|F}Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}[HM][{I|L}A]DY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.6483;3.3293;2.8058;2.2635;2.1787;2.1787;2.1626;1.8777;1.8107;1.7362 -;-;-;-;-;-;-;-;-;- 744 + 1 1.374 58418.0 1.0 6139 4680 10808 HBL1_DMSO_200M_050219_2,10821 HBL1_DMSO_200M_050219_2,10821,QFYDNKGITY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10822 58.43 116.0 440330.0 25 0 57490.0 + 2937 AVHDSFVAV 9 81 472.7447803540549 943.4750077749098 2 472.7453796267509 MULTI CID FTMS 0 0 0 10808 397151.5 0.4943010210594434 2 -0.2177467346191406 14 Unmodified _AVHDSFVAV_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 44.40701690623563 0.0526327925666318 4 {[VA]|[{I|L}G]}HDYAVAV 9 2 + 43.203 0.0 0.0 4.5791 4.5791 71.784 0.0 0.0 0.0 13.979400086720371 10.330145895351848 10.330145895351848 3.0102999566398125 0 0.8182503180159344 1.3979400086720375 0.5 0.0 {[VA]|[{I|L}G]}HDYAVAV;{[VA]|[{I|L}G]}HDS{M(Oxidation (M))|F}VAV;[HD]S{M(Oxidation (M))|F}VAVAV;{NN|[MP]|[D{I|L}]|[EV]}EEVAVAV;{[QD]|[EN]|[WG]|[KD]|[RS]}[DN]{I|L}AVAV;[HD]{[VA]|[{I|L}G]}YAVAV;[HD]{[VA]|[{I|L}G]}S{M(Oxidation (M))|F}VAV;[HD]S{[VA]|[{I|L}G]}{M(Oxidation (M))|F}VAV;{[QN]|[E{I|L}]|[KN]}DD{I|L}A[R{I|L}];{NN|[MP]|[D{I|L}]|[EV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WP]AV 4.5791;4.2601;3.0974;3.0432;2.3863;2.3863;2.0672;2.0672;1.4705;0.92884 -;+;-;-;-;-;-;-;-;- + 257 1 1.374 44751.3 1.0 6140 4680 10808 HBL1_DMSO_200M_050219_2,10822 HBL1_DMSO_200M_050219_2,10822,AVHDSFVAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10823 58.433 140.0 414790.0 25 0 94542.0 + 24936 MPPPPGPAL 9 74 438.73571008804686 875.4568672428937 2 438.7357971072197 MULTI CID FTMS 0 0 0 10808 377822.84375 0.924109737511102 -1 0.1128158569335937 15 Unmodified _MPPPPGPAL_ ENSG00000119596|ENST00000325680|YLPM1;nc|ENSG00000119596|P49750-1|YLPM1;nc|ENSG00000119596|P49750-3|YLPM1 56.04830969593885 0.0282699710924866 4 {[HG]|PP}GPPM 6 5 21.872 0.0 0.0 2.4984 0.0 0.0 0.0 296.1603645952691 296.1603645952691 -0.4980376447570478 0.0 -0.4980376447570478 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[HG]|PP}GPPM 2.4984 - 210 1 1.374 51248.2 1.0 6141 4680 10808 HBL1_DMSO_200M_050219_2,10823 HBL1_DMSO_200M_050219_2,10823,MPPPPGPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10824 58.444 641.0 558540.0 25 0 63481.0 + 39530 VAVKILKV 8 223 435.31267317299086 868.6107934127817 2 435.3125182986259 MULTI CID FTMS 0 0 0 10808 371418.875 0.8549729572289948 -1 0.1128158569335937 16 Unmodified _VAVKILKV_ ENSG00000132155|ENST00000251849|RAF1;ENST00000460610.1_1_3:12632295-12641253:-|nuORF;ENST00000494557.1_1_3:12632295-12633310:-|nuORF;nc|ENSG00000132155|P04049-2|RAF1 64.23631603340823 0.116217441302575 4 VAVK{I|L}{I|L}KV 8 0 + 77.812 0.0 0.0 8.9582 8.9582 88.731 0.0 0.0 0.0 31.638568026386693 5.361887814887595 5.361887814887595 5.361887814887595 0 1.878505795321031 1.5228787452803376 0.0 0.1505149978319906 + + VAVK{I|L}{I|L}KV;VAVK{I|L}{I|L}VK;VVAK{I|L}{I|L}KV;VVAK{I|L}{I|L}VK 8.9582;8.3409;5.9619;5.3446 +;-;-;- + 1061 + 1 1.374 270724.4 1.0 6142 4680 10808 HBL1_DMSO_200M_050219_2,10824 HBL1_DMSO_200M_050219_2,10824,VAVKILKV True True VAVKILKV 58.443992 435.312518298626 2773408.0 10808.0 nc|ENSG00000132155|P04049-2|RAF1;;ENST00000460610.1_1_3:12632295-12641253:-|nuORF;;ENSG00000132155|ENST00000251849|RAF1;;ENST00000494557.1_1_3:12632295-12633310:-|nuORF 4.402158737182617 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10825 58.45 348.0 423800.0 25 0 32400.0 -1 0 120 909.0598697049136 2724.1577797149407 3 909.7286865115166 MULTI CID FTMS 0 0 0 10808 220240.015625 0.1118618009233143 -2 0.2224006652832031 17 4 [YG]EQDVS[NG]AT 11 -1 56.283 0.0 0.0 2.0661 0.0 0.0 0.0 1599.6693513304283 1599.6693513304283 28.869720150842525 0.0 0.0 0.0 0 0.0 2.0 1.885151878060192 0.5941876774005248 [YG]EQDVS[NG]AT 2.0661 - 14910 1 1.374 103365.1 1.0 6143 4680 10808 HBL1_DMSO_200M_050219_2,10825 HBL1_DMSO_200M_050219_2,10825, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10826 58.453 152.0 533790.0 25 0 76499.0 + + 27954 DARLLRTI 8 102 478.7926739816839 955.5707950301678 2 479.2957641482353 MULTI CID FTMS 0 0 0 10808 204722.734375 1.0 0 0.0 18 Unmodified _PLVLKSSNV_ ENSG00000119599|ENST00000358377|DCAF4;nc|ENSG00000119599|Q8WV16-3|DCAF4;nc|ENSG00000119599|Q8WV16-4|DCAF4;nc|ENSG00000119599|Q8WV16-5|DCAF4 13.50788311687929 0.4710407108020397 4 {I|L}N{I|L}{I|L}RT{I|L} 7 -1 19.69 0.0 0.0 2.0606 0.0 0.0 114.02154446758614 0.0 114.02154446758614 0.0 7.907455271418218 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {I|L}N{I|L}{I|L}RT{I|L} 2.0606 - 177 + 1 1.374 67095.6 1.0 6144 4680 10808 HBL1_DMSO_200M_050219_2,10826 HBL1_DMSO_200M_050219_2,10826,PLVLKSSNV False False DARLLRTI 58.453327 479.295764148235 1803343.875 10808.0 ENSG00000119599|ENST00000358377|DCAF4;;nc|ENSG00000119599|Q8WV16-3|DCAF4;;nc|ENSG00000119599|Q8WV16-4|DCAF4;;nc|ENSG00000119599|Q8WV16-5|DCAF4 -0.4227120280265808 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10827 58.467 800.0 195150.0 25 0 35717.0 -1 0 68 1169.4817242422305 3505.423343326891 3 1169.813769519329 MULTI CID FTMS 0 0 0 10808 189924.5625 0.4596175627613931 -2 0.2224006652832031 19 4 MSN 3 -1 13.589 0.0 0.0 0.38764 0.0 0.0 2354.942797111641 815.3573092096311 3170.3001063212723 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 MSN 0.38764 - 102 + 1 1.374 121802.9 0.7099999785423279 6145 4680 10808 HBL1_DMSO_200M_050219_2,10827 HBL1_DMSO_200M_050219_2,10827, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10828 58.473 341.0 450200.0 25 0 43616.0 + 21224 LPDGRIIKV 9 168 337.55035122418985 1009.6292242727696 3 337.5496703982353 MULTI CID FTMS 0 0 0 10808 161285.84375 0.0024353501052834 12 -1.2964553833007812 20 Unmodified _LPDGRIIKV_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 19.62595529434964 0.305431704817896 4 {I|L}V{[ET]|[MV]}KPPKV 9 6 + 42.769 0.0 0.0 4.2361 4.2361 75.742 0.0 0.0 0.0 16.478174818886362 7.0166752027937065 7.0166752027937065 7.0166752027937065 0 0.384400500525261 0.0 0.4247425010840047 0.5114393726401688 {I|L}V{[ET]|[MV]}KPPKV;{I|L}V{[ET]|[MV]}KPPVK 4.2361;3.5411 -;- 565 + 1 1.374 128104.0 1.0 6146 4680 10808 HBL1_DMSO_200M_050219_2,10828 HBL1_DMSO_200M_050219_2,10828,LPDGRIIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10830 58.478 3.3 23989000.0 25 0 1702600.0 + 38199 TPRHIIVRF 9 105 380.2327029314581 1137.6762793945743 3 380.2325622439384 MULTI CID FTMS 0 0 0 10829 12859376.0 1.0 0 0.0 1 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 47.7319792270244 0.0453426645642791 4 T[RP]H{I|L}{I|L}VR{M(Oxidation (M))|F} 9 0 + 50.412 0.0 0.0 4.4311 4.4311 68.093 0.0 0.0 0.0 11.962724883926654 1.34698573897456 1.34698573897456 1.34698573897456 0 1.1989700043360187 0.0 0.0 0.3252574989159953 + + T[RP]H{I|L}{I|L}VR{M(Oxidation (M))|F};T[RP]H{I|L}{I|L}V{M(Oxidation (M))|F}R;T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}VR;T[RP]H{I|L}{M(Oxidation (M))|F}{I|L}VR;T[RP]H{M(Oxidation (M))|F}{I|L}{I|L}VR 4.4311;4.3127;4.2914;4.0268;2.9258 +;-;-;-;- + 164 + 1 1.383 69160.9 1.0 6147 4681 10829 HBL1_DMSO_200M_050219_2,10830 HBL1_DMSO_200M_050219_2,10830,TPRHIIVRF True True TPRHIIVRF 58.477837 380.232562243938 421599008.0 10829.0 nc|ENSG1000|Q9UN81|L1_ORF1 5.415713787078857 3.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10831 58.479 37.0 2176100.0 25 0 333560.0 + 7644 EKFKEALAL 9 100 350.206684673076 1047.598224619428 3 350.2061645388603 MULTI CID FTMS 0 0 0 10829 1804852.25 0.8678087981378808 1 -0.1491737365722656 2 Unmodified _EKFKEALAL_ REV__ENSG00000124541|ENST00000244496|RRP36;REV__nc|ENSG00000124541|Q96EU6-2|RRP36 29.081581746732265 0.1611639662936252 4 [{I|L}A]{I|L}{M(Oxidation (M))|F}KAE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 -1 + 61.418 0.0 0.0 5.8628 5.8628 76.328 0.0 0.0 0.0 38.71523434085148 3.1234684152074976 3.1234684152074976 2.680854553793296 0 0.4247425010840047 2.0 1.1307196863200843 0.0 [{I|L}A]{I|L}{M(Oxidation (M))|F}KAE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}A]{I|L}{M(Oxidation (M))|F}AKE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}A]{I|L}{M(Oxidation (M))|F}AEK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}A]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}AE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}A][YG]KE{I|L}[RV];[{I|L}A][YG]A[VS]{I|L}[RV];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EKE{I|L}[RV];[{I|L}A]{I|L}{M(Oxidation (M))|F}K[R{M(Oxidation (M))|F}][PG];[{I|L}A][YG]A{I|L}[VS][RV];[{I|L}A]AMK{M(Oxidation (M))|F}{I|L}[RV] 5.8628;5.6069;4.6292;4.4539;4.0892;3.3783;3.173;2.9936;2.9729;2.9691 -;-;-;-;-;-;-;-;-;- 598 + 1 1.383 70588.2 1.0 6148 4681 10829 HBL1_DMSO_200M_050219_2,10831 HBL1_DMSO_200M_050219_2,10831,EKFKEALAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10832 58.48 26.0 2460200.0 25 0 277990.0 + 8234 EPYPEVSRI 9 88 545.2824479364269 1088.5503429396538 2 545.2827636599541 MULTI CID FTMS 0 0 0 10829 1291631.375 0.6112337621314485 2 -0.27691650390625 3 Unmodified _EPYPEVSRI_ ENSG00000165643|ENST00000425225|SOHLH1;nc|ENSG00000165643|Q5JUK2|SOHLH1 22.774965066869 0.2414061210083823 4 [EP]YPEV 6 3 50.283 0.0 0.0 4.6193 0.0 0.0 0.0 371.2047518365844 371.2047518365844 31.409080081077985 0.0 0.0 0.0 0 0.7887254899964358 1.3979400086720375 0.0 0.0 + [EP]YPEV 4.6193 + + 190 + 1 1.383 54026.6 1.0 6149 4681 10829 HBL1_DMSO_200M_050219_2,10832 HBL1_DMSO_200M_050219_2,10832,EPYPEVSRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10833 58.481 36.0 1344500.0 25 0 282840.0 + 4466 DAYALNHTL 9 81 509.2535253747258 1016.4924978162516 2 509.2536804080009 MULTI CID FTMS 0 0 0 10829 1149995.375 0.0037906115726109 10 -1.162872314453125 4 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 60.07390631473393 0.0260411565414776 4 {[DA]|[EG]}YA{I|L}N[HT]{I|L} 9 0 + 70.754 0.0 0.0 6.9606 6.9606 89.296 0.0 0.0 0.0 31.270721711574048 15.558481052291668 15.558481052291668 9.208187539523747 0 1.25 1.6989700043360187 1.6861818737241734 0.0 + + {[DA]|[EG]}YA{I|L}N[HT]{I|L};{[DA]|[EG]}YA{I|L}GG[HT]{I|L};{[DA]|[EG]}[TP]A{I|L}VDC{I|L};{[DA]|[EG]}[TP]V{I|L}ADC{I|L};{[DA]|[EG]}[TP]A{I|L}MW{I|L} 6.9606;6.0547;3.9266;3.8707;1.8052 +;-;-;-;- + 249 + 1 1.383 43183.6 1.0 6150 4681 10829 HBL1_DMSO_200M_050219_2,10833 HBL1_DMSO_200M_050219_2,10833,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10834 58.483 73.0 987260.0 25 0 116100.0 + 15079 IMKSPTWKV 9 93 363.8745715571168 1088.6018852715504 3 363.8743774294853 MULTI CID FTMS 0 0 0 10829 542746.5 0.5948266597219544 6 -0.7115898132324219 5 Unmodified _IMKSPTWKV_ REV__ENSG00000095059|ENST00000210060|DHPS;REV__ENST00000595844.5_1_19:12787852-12790977:-|nuORF;REV__nc|ENSG00000095059|P49366-2|DHPS;REV__nc|ENSG00000095059|P49366-3|DHPS 8.593279151180031 0.6146971463335029 4 [YG]P{M(Oxidation (M))|F}KGPPKV 10 -1 + 25.539 0.0 0.0 2.346 2.346 72.387 0.0 0.0 0.0 7.269987279362621 8.584620015722383 7.269987279362621 8.584620015722383 0 0.3935078169319297 0.0 0.0 0.0 [YG]P{M(Oxidation (M))|F}KGPPKV;GG{I|L}{I|L}VGK{M(Oxidation (M))|F}P{[DS]|[MA]|[CV]|TT};[KP][{I|L}T]GK{M(Oxidation (M))|F}P{[DS]|[MA]|[CV]|TT};GG{I|L}{I|L}RK{M(Oxidation (M))|F}P{[DS]|[MA]|[CV]|TT} 2.346;1.5574;1.0876;0.95339 -;-;-;- 116 + 1 1.383 68898.4 1.0 6151 4681 10829 HBL1_DMSO_200M_050219_2,10834 HBL1_DMSO_200M_050219_2,10834,IMKSPTWKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10835 58.486 121.0 496410.0 25 0 72462.0 + 41429 VPLGLAAEL 9 81 441.7683182352048 881.5220835372097 2 441.7682678103447 MULTI CID FTMS 0 0 0 10829 394045.34375 0.4421301474640119 -23 1.908287048339844 6 Unmodified _VPLGLAAEL_ REV__ENSG00000100593|ENST00000342219|ISM2;REV__nc|ENSG00000100593|Q6H9L7-2|ISM2;REV__nc|ENSG00000100593|Q6H9L7-3|ISM2;REV__nc|ENSG00000100593|Q6H9L7-4|ISM2;REV__nc|ENSG00000100593|Q6H9L7-5|ISM2 44.40701690623563 0.0526327925666318 4 VP{I|L}{M(Oxidation (M))|F}{I|L}SPG 8 -1 58.67 0.0 0.0 6.6555 0.0 0.0 0.0 68.0513170831664 68.0513170831664 39.85776296228558 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8494850021680094 0.0 VP{I|L}{M(Oxidation (M))|F}{I|L}SPG 6.6555 - 366 + 1 1.383 53687.8 1.0 6152 4681 10829 HBL1_DMSO_200M_050219_2,10835 HBL1_DMSO_200M_050219_2,10835,VPLGLAAEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10836 58.488 121.0 526530.0 25 0 45766.0 + 1871 ALVQDLAKA 9 100 464.7767068282735 927.538860723347 2 464.7768432497978 MULTI CID FTMS 0 0 0 10829 306645.09375 0.2739864255490957 2 -0.27691650390625 7 Unmodified _ALVQDLAKA_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 38.17557092003332 0.0854718145212029 4 [{I|L}A]VQD{I|L}A[KA] 9 0 + 60.342 0.0 0.0 6.5056 6.5056 87.615 0.0 0.0 0.0 43.17461334784748 4.891204021003219 4.891204021003219 9.208187539523747 0 0.805462187404089 2.0 0.0 0.7215141619232908 + + [{I|L}A]VQD{I|L}A[KA];[{I|L}A]V[AG]D{I|L}A[KA] 6.5056;5.5128 +;- + 550 + 1 1.383 53790.1 1.0 6153 4681 10829 HBL1_DMSO_200M_050219_2,10836 HBL1_DMSO_200M_050219_2,10836,ALVQDLAKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10837 58.5 695.0 237710.0 25 0 13997.0 + 32359 RYPGYMNNDL 10 152 621.7820733641528 1241.5495937951057 2 621.7822143435478 MULTI CID FTMS 0 0 0 10829 277223.75 0.3044228886469228 2 -0.27691650390625 8 Unmodified _RYPGYMNNDL_ ENSG00000037042|ENST00000251412|TUBG2;ENSG00000131462|ENST00000251413|TUBG1 125.52916310638032 0.0002202040671188 4 [YR][PG]YMNND{I|L} 10 0 + 93.408 0.0 0.0 7.5235 7.5235 90.137 0.0 0.0 0.0 15.28698460507087 16.53212513775344 15.28698460507087 9.164539485499262 0 1.41944517631652 1.6989700043360187 0.0 1.3807196863200843 + + [YR][PG]YMNND{I|L};[YR][PG]YMGGND{I|L};[YR][PG]YMNGGD{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GRYMNND{I|L};[{M(Oxidation (M))|F}V]NNMY{I|L}ND{I|L};{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}YMNND{I|L};[PG]YRYMNND{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GRYMNGGD{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[VG]YMNND{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GRYMGGND{I|L} 7.5235;6.7853;6.7853;6.2922;6.1379;5.9317;5.6344;5.554;5.554;5.554 +;-;-;-;-;-;-;-;-;- + 3157 1 1.383 123939.9 1.0 6154 4681 10829 HBL1_DMSO_200M_050219_2,10837 HBL1_DMSO_200M_050219_2,10837,RYPGYMNNDL True True RYPGYMNNDL 58.500148 621.782214343548 17501374.0 10829.0 ENSG00000037042|ENST00000251412|TUBG2;;ENSG00000131462|ENST00000251413|TUBG1 8.271946907043457 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10838 58.503 160.0 529840.0 25 0 58795.0 -1 LAMMVCSI 8 89 478.7159607058304 0 478.7158386111259 PEAK CID FTMS 0 0 0 10829 266940.53125 1.0 0 0.0 9 Carbamidomethyl (C),2 Oxidation (M) _LAM(Oxidation (M))M(Oxidation (M))VC(Carbamidomethyl (C))SI_ ENSG00000197584|ENST00000452583|KCNMB2 19.438996006549623 0.4285751805470146 4 {I|L}N{I|L} 3 -1 7.7917 0.0 0.0 0.81553 0.0 0.0 113.86804627708143 498.30488001041255 612.172926287494 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}N{I|L} 0.81553 - 42 + 1 1.383 76163.0 1.0 6155 4681 10829 HBL1_DMSO_200M_050219_2,10838 HBL1_DMSO_200M_050219_2,10838,LAMMVCSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10839 58.505 46.0 1712600.0 25 0 212900.0 23061 LSLKAYRL 8 104 482.3029028316527 962.5912527301056 2 482.3026000857353 MULTI CID FTMS 0 0 0 10829 224116.09375 1.0 0 0.0 10 Unmodified _LSLKAYRL_ ENSG00000147677|ENST00000521861|EIF3H 9.347437153973935 0.7675937258251505 4 [EP]S{I|L} 4 7 27.497 0.0 0.0 2.8565 0.0 0.0 0.0 533.3569442186398 533.3569442186398 1.9485759752099376 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.9247425010840048 0.0 [EP]S{I|L} 2.8565 - 83 1 1.383 65243.1 1.0 6156 4681 10829 HBL1_DMSO_200M_050219_2,10839 HBL1_DMSO_200M_050219_2,10839,LSLKAYRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10840 58.511 349.0 492560.0 25 0 105350.0 + + 16180 KVIDDLKKLGA 11 136 400.2543840574804 0 400.2541992068291 PEAK CID FTMS 0 0 0 10829 225257.921875 1.0 0 0.0 11 Unmodified _IVEQTVKIIR_ nc|ENSG00000138688|Q2LD37|BLTP1;ENSG00000138688|ENST00000679879|BLTP1;nc|ENSG00000138688|Q2LD37-7|BLTP1;nc|ENSG00000138688|Q2LD37-6|BLTP1;nc|ENSG00000138688|Q2LD37-4|BLTP1 5.783430956126388 0.3961065659209837 4 D{I|L}K 3 -1 15.445 0.0 0.0 1.9343 0.0 0.0 55.04208002726711 384.22507654361567 439.2671565708828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 D{I|L}K 1.9343 - 43 + 1 1.383 134500.4 1.0 6157 4681 10829 HBL1_DMSO_200M_050219_2,10840 HBL1_DMSO_200M_050219_2,10840,IVEQTVKIIR False False KVIDDLKKLGA 58.510846 400.254199206829 992534.25 10829.0 nc|ENSG00000138688|Q2LD37|BLTP1;;ENSG00000138688|ENST00000679879|BLTP1;;nc|ENSG00000138688|Q2LD37-7|BLTP1;;nc|ENSG00000138688|Q2LD37-6|BLTP1;;nc|ENSG00000138688|Q2LD37-4|BLTP1 5.649019877115886 3.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10841 58.525 800.0 235510.0 25 0 26004.0 + 44395 YLVSKASHIS 10 169 552.8052252291874 1103.595897525175 2 552.8049194216728 MULTI CID FTMS 0 0 0 10829 175553.8125 0.7894967285490059 3 -0.3422698974609375 12 Unmodified _YLVSKASHIS_ ENSG00000145982|ENST00000274680|FARS2 29.081581746732265 0.3152867722954398 4 [Y{I|L}]V[KT]SGHTV 10 5 + 50.247 0.0 0.0 4.553 4.553 75.051 0.0 0.0 0.0 32.76326158960909 4.929123143333456 4.929123143333456 5.271460624019312 0 0.7742275032520141 2.0 0.9417509724019616 0.4247425010840047 [Y{I|L}]V[KT]SGHTV;[Y{I|L}]V{M(Oxidation (M))|F}NHAK{I|L};[Y{I|L}]V[KT]SGHS{I|L};[Y{I|L}]V{M(Oxidation (M))|F}NHA{I|L}K;[Y{I|L}]V{M(Oxidation (M))|F}N[RP]PV;[Y{I|L}]{I|L}EW[PG]KV;[Y{I|L}]{I|L}EW[KG]PV;[Y{I|L}]{I|L}[KS]SGHTV;[Y{I|L}]{I|L}Y[VP]HTV;[Y{I|L}]V[H{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV 4.553;4.0753;4.0584;3.9967;3.9409;3.7937;3.7455;3.6676;3.6272;3.2874 -;-;-;-;-;-;-;-;-;- 3517 + 1 1.383 143195.2 0.9300000071525574 6158 4681 10829 HBL1_DMSO_200M_050219_2,10841 HBL1_DMSO_200M_050219_2,10841,YLVSKASHIS False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10842 58.539 800.0 207750.0 25 0 13274.0 -1 0 111 865.8991707412696 1729.783788549339 2 865.8990356326103 MULTI CID FTMS 0 0 0 10829 161621.4375 0.8749266331964327 -1 0.068572998046875 13 4 [NP]{I|L}N{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 78.14 0.0 0.0 4.5174 4.5174 70.594 0.0 0.0 0.0 2.539015903803275 2.539015903803275 2.539015903803275 2.539015903803275 0 0.9247425010840048 0.958607314841775 0.3494850021680094 1.1989700043360187 [NP]{I|L}N{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[YV][WH]{I|L}Q;[NP][YT]Q{I|L}QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}T]Q{I|L}QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{I|L}E[WM]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[YT][{I|L}T]K[YG] 4.5174;4.3706;4.1504;3.9953;3.9953;3.9953;3.8753;3.7265;3.6673;3.6354 -;-;-;-;-;-;-;-;-;- 1244 1 1.383 111375.8 0.7799999713897705 6159 4681 10829 HBL1_DMSO_200M_050219_2,10842 HBL1_DMSO_200M_050219_2,10842, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10843 58.552 800.0 211400.0 25 0 15819.0 + 25004 MPPPPPQGV 9 188 460.2387791235199 918.4630053138396 2 460.2382690310478 MULTI CID FTMS 0 0 0 10829 124987.1015625 0.7487574024647519 6 -0.7115898132324219 14 Unmodified _MPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 74.39630413441286 0.0193995060682538 4 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR 8 2 + 37.942 0.0 0.0 4.131 4.131 68.428 0.0 0.0 0.0 2.1002345915110894 2.1002345915110894 2.1002345915110894 2.1002345915110894 0 1.8098943791441968 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}PPPPQR;{NN|[MP]|[D{I|L}]|[EV]}PPPPQGV;[VG][EP]HPQR;{[VA]|[{I|L}G]}[HD]PPQR;{[VA]|[{I|L}G]}[DP]HPQR;[PS][HT]PPQR;[VP]{[DA]|[EG]}HPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQGV;[PS][TP]HPQR;{NN|[MP]|[D{I|L}]|[EV]}[YK]PQR 4.131;3.9024;3.0026;2.252;2.1111;2.0096;1.9923;1.973;1.8688;1.8195 -;+;-;-;-;-;-;-;-;- + 825 1 1.383 131958.6 0.6800000071525574 6160 4681 10829 HBL1_DMSO_200M_050219_2,10843 HBL1_DMSO_200M_050219_2,10843,MPPPPPQGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10844 58.568 800.0 173290.0 25 0 8484.2 -1 0 127 881.912173304008 1761.809793674816 2 882.4139892458916 MULTI CID FTMS 0 0 0 10829 120217.734375 0.577083573193064 -1 0.068572998046875 15 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEAQ{[WT]|[RM]}{[MG]|[TS]}{I|L}Q 15 -1 + 57.374 0.0 0.0 3.2565 3.2565 67.951 0.0 0.0 0.0 0.9497551323085672 4.503187623076954 0.9497551323085672 3.1005108973245115 0 0.5 0.0 0.3807196863200844 0.3494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEAQ{[WT]|[RM]}{[MG]|[TS]}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEAQ{[WT]|[RM]}[{I|L}T]SQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}R[{M(Oxidation (M))|F}V][KA]AEN{I|L}DP{[QN]|[E{I|L}]|[KN]};[VP]QN[KT]{[YC]|[HE]}EN{I|L}DP{[QN]|[E{I|L}]|[KN]};EEVD{I|L}NEAQ{[WT]|[RM]}{[MG]|[TS]}{I|L}Q;[NP]{I|L}N[KT]{[YC]|[HE]}EN{I|L}DP{[QN]|[E{I|L}]|[KN]};EEVD{I|L}NEAQ{[WT]|[RM]}[{I|L}T]SQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}R[{M(Oxidation (M))|F}V][KA]AEN{I|L}DV[HC];[VP]QN{[CA]|SS}[H{I|L}]AEN{I|L}DP{[QN]|[E{I|L}]|[KN]};[VP]QN[KT]{[YC]|[HE]}EN{I|L}DV[HC] 3.2565;3.0805;3.0009;2.9493;2.8171;2.7424;2.6411;2.5615;2.5526;2.5099 -;-;-;-;-;-;-;-;-;- 2506 + 1 1.383 96130.0 0.7300000190734863 6161 4681 10829 HBL1_DMSO_200M_050219_2,10844 HBL1_DMSO_200M_050219_2,10844, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10845 58.574 334.0 294140.0 25 0 32948.0 18549 LAAAVLLGD 9 143 421.7515456767997 841.4885384203993 2 421.7525817751884 MULTI CID FTMS 0 0 0 10829 153689.4375 0.634333929395061 11 -1.2278823852539062 16 Unmodified _LAAAVLLGD_ ENSG00000169247|ENST00000515425|SH3TC2;ENST00000510779.1_1_5:148384276-148408226:-|nuORF;nc|ENSG00000169247|Q8TF17-2|SH3TC2;nc|ENSG00000169247|Q8TF17-5|SH3TC2 21.74664581756881 0.2544899275067181 4 {I|L}AAE 4 6 45.918 0.0 0.0 5.4567 0.0 0.0 0.0 454.2776278131469 454.2776278131469 34.13486372931244 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}AAE 5.4567 - 136 + 1 1.383 83481.5 1.0 6162 4681 10829 HBL1_DMSO_200M_050219_2,10845 HBL1_DMSO_200M_050219_2,10845,LAAAVLLGD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10846 58.588 800.0 151760.0 25 0 14175.0 + 19631 LGETHPIGL 9 166 468.7605027206147 935.5064525080294 2 468.7602416872978 MULTI CID FTMS 0 0 0 10829 112521.1015625 0.5300762599886836 2 -0.27691650390625 17 Unmodified _LGETHPIGL_ REV__ENSG00000197309|ENST00000641351|OR10D3 23.1484247019978 0.2366544122328345 4 {I|L}GYEVRS{I|L} 8 -1 + 47.131 0.0 0.0 5.038 5.038 73.612 0.0 0.0 0.0 24.49070374368116 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.055462187404089 0.958607314841775 0.2742275032520141 0.0 {I|L}GYEVRS{I|L};{I|L}GYEVRTV;{I|L}GYEVRVT;{I|L}GY[HK][YR];{I|L}[WY]V[VS]G{I|L};{I|L}[WY]V[VG]S{I|L};{I|L}[WY]V[VS]AV;{I|L}[WY]V[VG]TV 5.038;4.7162;3.7455;3.2182;1.0268;0.97001;0.70503;0.64823 -;-;-;-;-;-;-;- 422 + 1 1.383 98438.3 0.6800000071525574 6163 4681 10829 HBL1_DMSO_200M_050219_2,10846 HBL1_DMSO_200M_050219_2,10846,LGETHPIGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10847 58.603 800.0 139650.0 25 0 13392.0 + 45602 YVIDSTDEERL 11 123 670.322551802966 1338.630550672732 2 670.3215209841728 MULTI CID FTMS 0 0 0 10829 92779.2109375 1.0 0 0.0 18 Unmodified _YVIDSTDEERL_ ENSG00000101246|ENST00000622789|ARFRP1;ENST00000609537.5_1_20:62333085-62338084:-|nuORF;nc|ENSG00000101246|Q13795-2|ARFRP1;nc|ENSG00000101246|Q13795-3|ARFRP1;nc|ENSG00000101246|Q13795-4|ARFRP1 34.67350252821523 0.2944480012833759 4 YV{I|L}DSTDEER{I|L} 11 0 + 99.92 0.0 0.0 7.4643 7.4643 92.676 0.0 0.0 0.0 82.11813275393607 7.800635934095411 7.800635934095411 12.150093250860522 0 0.75 2.0 1.2302046884880935 0.0 + + YV{I|L}DSTDEER{I|L};YV{I|L}DSTDE[W{I|L}]V;YV{I|L}E[MD]{M(Oxidation (M))|F}VNP{I|L};YV{I|L}DST[YK]M[YG];YV{I|L}DS[WP]{[{M(Oxidation (M))|F}C]|[YS]}P{I|L};YV{I|L}DST[EP][WM]V;YV[WE]TDEER{I|L};YV{I|L}DS[WP]{[ES]|[DT]|[{I|L}C]}M{I|L};YV{I|L}DS[RD]{NN|[MP]|[D{I|L}]|[EV]}M{I|L};YV{I|L}E[MD]{M(Oxidation (M))|F}VGGP{I|L} 7.4643;6.5567;5.239;5.0744;5.0626;4.9902;4.9526;4.8769;4.7431;4.557 +;-;-;-;-;-;-;-;-;- + 571 + 1 1.383 87007.6 0.7099999785423279 6164 4681 10829 HBL1_DMSO_200M_050219_2,10847 HBL1_DMSO_200M_050219_2,10847,YVIDSTDEERL False True YVIDSTDEERL 58.60252 670.321520984173 946880.4375 10829.0 nc|ENSG00000101246|Q13795-2|ARFRP1;;nc|ENSG00000101246|Q13795-4|ARFRP1;;nc|ENSG00000101246|Q13795-3|ARFRP1;;ENSG00000101246|ENST00000622789|ARFRP1;;ENST00000609537.5_1_20:62333085-62338084:-|nuORF 6.2710161209106445 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10848 58.608 326.0 234470.0 25 0 15877.0 + -1 PSFTAMELSV 10 121 562.2691922360351 1122.52383153887 2 562.2687255740166 MULTI CID FTMS 0 0 0 10829 84296.3515625 0.5192148210526316 -3 0.2909736633300781 19 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PSFTAMELSV_ REV__ENSG00000214655|ENST00000604729|ZSWIM8;REV__ENST00000433366.6_1_10:75557251-75561274:+|nuORF;REV__nc|ENSG00000214655|A7E2V4-3|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4-4|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4-5|ZSWIM8;REV__nc|ENSG00000214655|A7E2V4|ZSWIM8 20.453626601364224 0.5043500229302764 4 WWSM{I|L}S[WK] 8 -1 + 45.653 0.0 0.0 4.067 4.067 76.251 0.0 0.0 0.0 19.74468968362665 29.45889289505932 19.74468968362665 8.45098040014257 0 0.0 2.0 0.7059771852360797 0.0 WWSM{I|L}S[WK];WWSMS{I|L}[WK];{[QS]|[NT]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}SQW;[VG]{[MG]|[TS]}DM{I|L}S[WK];{[QS]|[NT]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MS{I|L}QW;[EP]NT[YV]S[WK];[TP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}M{I|L}SQW;[YV][W{I|L}]NDQW;[PS]{[MG]|[TS]}SM{I|L}S[WK];[TP]{[CA]|SS}SM{I|L}S[WK] 4.067;3.3142;2.0159;1.6845;1.263;1.1978;1.1881;1.1795;1.1623;1.1513 -;-;-;-;-;-;-;-;-;- 545 1 1.383 62715.6 1.0 6165 4681 10829 HBL1_DMSO_200M_050219_2,10848 HBL1_DMSO_200M_050219_2,10848,PSFTAMELSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10849 58.622 800.0 54348.0 25 0 4232.9 -1 0 57 855.7466918826103 0 855.7466918826103 PEAK CID FTMS 0 0 0 -1 0 20 4 QV{I|L} 3 -1 15.956 0.0 0.0 0.93336 0.0 0.0 1183.2034534900267 183.0411165826781 1366.2445700727048 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 QV{I|L} 0.93336 - 79 + 1 1.383 40608.1 0.6499999761581421 6166 4681 10829 HBL1_DMSO_200M_050219_2,10849 HBL1_DMSO_200M_050219_2,10849, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10851 58.627 29.0 2634000.0 25 0 467930.0 + 44668 YPFKPPKV 8 84 325.86056900573425 974.5598776174028 3 325.8599731326103 MULTI CID FTMS 0 0 0 10850 1307178.125 0.0202578060497094 7 -0.762451171875 1 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 37.679 0.0 0.0 3.8662 3.8662 81.15 0.0 0.0 0.0 5.952497962038365 3.989568978889935 3.989568978889935 22.907300390241687 0 0.2887254899964357 0.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[HG]|PP}KK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.8662;1.5157;1.0912;0.53298 +;-;-;- + 272 + 1 1.405 69994.8 1.0 6167 4682 10850 HBL1_DMSO_200M_050219_2,10851 HBL1_DMSO_200M_050219_2,10851,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10852 58.628 30.0 1650300.0 25 0 145680.0 + + 15281 LPAERIQEI 9 70 534.8067729392013 1067.5989929452026 2 534.8060180544853 MULTI CID FTMS 0 0 0 10850 1179417.25 0.4585863041630076 1 -0.1277427673339843 2 Unmodified _IPIGWQIEL_ ENSG00000136448|ENST00000258960|NMT1;nc|ENSG00000136448|P30419-2|NMT1;ENST00000590114.5_1_17:43138721-43173651:+|nuORF 25.399314129420983 0.2080152500878129 4 {I|L}PYQ 4 -1 55.745 0.0 0.0 5.2216 0.0 0.0 0.0 563.2949923150999 563.2949923150999 41.76599703664159 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PYQ 5.2216 - 122 + 1 1.405 46630.9 1.0 6168 4682 10850 HBL1_DMSO_200M_050219_2,10852 HBL1_DMSO_200M_050219_2,10852,IPIGWQIEL False False LPAERIQEI 58.628243 534.806018054485 33371230.0 10850.0 ENSG00000136448|ENST00000258960|NMT1;;nc|ENSG00000136448|P30419-2|NMT1;;ENST00000590114.5_1_17:43138721-43173651:+|nuORF 4.81465482711792 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10853 58.629 28.0 2702700.0 25 0 328530.0 + 4547 DAYPQRIKF 9 83 569.3061034210313 1136.5976539088624 2 569.3066284060478 MULTI CID FTMS 0 0 0 10850 1178375.0 0.4762952786188437 1 -0.1277427673339843 3 Unmodified _DAYPQRIKF_ ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13753187-13770868:+|nuORF;nc|ENSG00000046651|O75665-2|OFD1;nc|ENSG00000046651|O75665-3|OFD1 21.59015148037692 0.2564810811560323 4 {[DA]|[EG]}Y 3 6 29.978 0.0 0.0 2.6375 0.0 0.0 0.0 784.447146666928 784.447146666928 19.493559221610965 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}Y 2.6375 + + 34 1 1.405 62214.1 1.0 6169 4682 10850 HBL1_DMSO_200M_050219_2,10853 HBL1_DMSO_200M_050219_2,10853,DAYPQRIKF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10854 58.631 42.0 1266100.0 25 0 214060.0 + 22705 LQFDKAINA 9 84 510.2793470472543 1018.5441411613086 2 510.2792541384697 MULTI CID FTMS 0 0 0 10850 1059524.375 0.6716289948466576 -1 0.1491737365722656 4 Unmodified _LQFDKAINA_ ENSG00000140307|ENST00000396060|GTF2A2 53.832793166522166 0.0319663582346103 4 {[DA]|[EG]}K{M(Oxidation (M))|F}{I|L}GA{[QG]|[NA]}{I|L} 10 7 + 60.723 0.0 0.0 5.9617 5.9617 75.153 0.0 0.0 0.0 9.586294715930777 4.527712246842484 4.527712246842484 1.7609125905568137 0 0.0 1.154901959985743 0.7742275032520141 0.3807196863200844 {[DA]|[EG]}K{M(Oxidation (M))|F}{I|L}GA{[QG]|[NA]}{I|L};{[DA]|[EG]}K{M(Oxidation (M))|F}{I|L}Q{[QG]|[NA]}{I|L};{[DA]|[EG]}K{I|L}{M(Oxidation (M))|F}GA{[QG]|[NA]}{I|L};{[DA]|[EG]}K{I|L}{M(Oxidation (M))|F}Q{[QG]|[NA]}{I|L};[Q{I|L}]{M(Oxidation (M))|F}[VS]GA{[QG]|[NA]}{I|L};{[DA]|[EG]}K{M(Oxidation (M))|F}{I|L}GQQ{I|L};[Q{I|L}][VS]{M(Oxidation (M))|F}GA{[QG]|[NA]}{I|L};[Q{I|L}]{M(Oxidation (M))|F}[VS]Q{[QG]|[NA]}{I|L};[Q{I|L}][YG]{I|L}GA{[QG]|[NA]}{I|L};{[DA]|[EG]}K{M(Oxidation (M))|F}{I|L}GG[QA]{I|L} 5.9617;5.7889;5.273;5.1001;5.0206;4.8991;4.8741;4.8477;4.8028;4.7764 -;-;-;-;-;-;-;-;-;- 810 1 1.405 48976.6 1.0 6170 4682 10850 HBL1_DMSO_200M_050219_2,10854 HBL1_DMSO_200M_050219_2,10854,LQFDKAINA True True LQFDKAINA 58.63061 510.27925413847 11362571.0 10850.0 ENSG00000140307|ENST00000396060|GTF2A2 4.497545560201009 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10855 58.633 86.0 600020.0 25 0 51832.0 + 44752 YPLESRPSL 9 68 531.2862786994502 1060.5580044657004 2 531.2847778201103 MULTI CID FTMS 0 0 0 10850 501805.375 1.0 0 0.0 5 Unmodified _YPLESRPSL_ ENSG00000137497|ENST00000393695|NUMA1;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1 26.268140514670165 0.1969607489560049 4 YP{I|L}EQ 5 5 61.058 0.0 0.0 5.7571 0.0 0.0 0.0 427.2294405572876 427.2294405572876 49.27500734731366 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3807196863200844 0.0 YP{I|L}EQ 5.7571 - 74 + 1 1.405 48676.5 1.0 6171 4682 10850 HBL1_DMSO_200M_050219_2,10855 HBL1_DMSO_200M_050219_2,10855,YPLESRPSL False True YPLESRPSL 58.632545 531.28477782011 6480278.0 10850.0 ENSG00000137497|ENST00000393695|NUMA1;;nc|ENSG00000137497|Q14980-2|NUMA1;;ENST00000540626.5_1_11:71714575-71718510:-|nuORF;;nc|ENSG00000137497|Q14980-5|NUMA1 6.60087776184082 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10856 58.634 87.0 651110.0 25 0 46226.0 + 25365 NAYDNHVFV 9 93 539.751444669455 1077.48833640571 2 539.7515746951103 MULTI CID FTMS 0 0 0 10850 468716.0 1.0 0 0.0 6 Unmodified _NAYDNHVFV_ ENSG00000092439|ENST00000646667|TRPM7 19.256988751693697 0.3154191944385105 4 {[QG]|[NA]}Y 3 6 29.181 0.0 0.0 2.7083 0.0 0.0 0.0 726.3220820934631 726.3220820934631 0.3072623954359699 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[QG]|[NA]}Y 2.7083 + + 530 1 1.405 48789.5 1.0 6172 4682 10850 HBL1_DMSO_200M_050219_2,10856 HBL1_DMSO_200M_050219_2,10856,NAYDNHVFV False True NAYDNHVFV 58.634499 539.75157469511 3695616.25 10850.0 ENSG00000092439|ENST00000646667|TRPM7 3.0401200453440347 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10857 58.639 218.0 399420.0 25 0 24776.0 -1 YLFYCKNCRFY 11 97 788.8549205105439 1575.6952880878878 2 789.3571655154228 MULTI CID FTMS 0 0 0 10850 433384.90625 0.5199772741980562 2 -0.1930961608886718 7 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 4 {[QN]|[E{I|L}]|[KN]}A[YK]MAQQNA{M(Oxidation (M))|F}Y 13 -1 + 67.485 0.0 0.0 4.2829 4.2829 76.576 0.0 0.0 0.0 3.094503908054904 37.712665962669824 3.094503908054904 7.781512503836431 0 0.7429928190999391 0.0 0.0 2.135151878060192 {[QN]|[E{I|L}]|[KN]}A[YK]MAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[YK]MAQQGGA{M(Oxidation (M))|F}Y;[QA]E[Y{I|L}]MAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[AG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQNA{M(Oxidation (M))|F}Y 4.2829;3.789;3.7071;3.7071;3.7071;3.3941;3.2133;3.2133;3.2133;3.2133 -;-;-;-;-;-;-;-;-;- 2066 1 1.405 63705.4 1.0 6173 4682 10850 HBL1_DMSO_200M_050219_2,10857 HBL1_DMSO_200M_050219_2,10857,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10858 58.652 800.0 247520.0 25 0 15011.0 + 42743 VVDPNDPQML 10 178 564.2740623385838 1126.5335717439675 2 564.2744628787041 MULTI CID FTMS 0 0 0 10850 238194.890625 0.4585804373682006 -2 0.2177467346191406 8 Unmodified _VVDPNDPQML_ ENSG00000151883|ENST00000281631|PARP8 63.960520009940105 0.0261970246776379 4 [YV]VDYPQM{I|L} 9 4 + 41.907 0.0 0.0 3.72 3.72 66.028 0.0 0.0 0.0 3.3433687234379548 3.3433687234379548 3.3433687234379548 1.6323574210617835 0 0.7429928190999391 1.2218487496163564 0.0 0.9361818737241736 [YV]VDYPQM{I|L};[YV]QPDYVM{I|L};VVDYYPQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[QP]VYYDV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};VVD[NP]DPQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[DP]NDVVPQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]DDVVPQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[QP]D[NP]DVV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[EP]N[NP]DVV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[EP]N[W{I|L}]PQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.72;3.5751;3.4232;3.3074;3.2683;3.2665;3.0741;3.0277;3.0277;2.9824 -;-;-;-;+;-;-;-;-;- + 3399 + 1 1.405 153669.7 1.0 6174 4682 10850 HBL1_DMSO_200M_050219_2,10858 HBL1_DMSO_200M_050219_2,10858,VVDPNDPQML True True VVDPNDPQML 58.652481 564.274462878704 4795662.0 10850.0 ENSG00000151883|ENST00000281631|PARP8 5.214395840962728 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10859 58.655 116.0 417640.0 25 0 32315.0 + 6344 DVMLAKHVI 9 101 513.2944822731448 0 513.2939941287041 PEAK CID FTMS 0 0 0 10850 239024.296875 0.9986123597574016 1 -0.1277427673339843 9 Unmodified _DVMLAKHVI_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 21.74664581756881 0.185237546287679 4 {I|L} 1 8 9.732 0.0 0.0 0.94986 0.0 0.0 345.1366650347854 563.3294771783811 908.4661422131664 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L} 0.94986 + + 109 + 1 1.405 44596.5 1.0 6175 4682 10850 HBL1_DMSO_200M_050219_2,10859 HBL1_DMSO_200M_050219_2,10859,DVMLAKHVI False True DVMLAKHVI 58.654913 513.293994128704 1984281.25 10850.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 4.481945832570394 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10860 58.659 233.0 397630.0 25 0 43059.0 + + 45362 SYLDARSL 8 114 462.7426897061943 0 462.7431213259697 PEAK CID FTMS 0 0 0 10850 220714.0625 1.0 0 0.0 10 Unmodified _YSRSGELI_ nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11;ENSG00000072803|ENST00000517395|FBXW11 20.453626601364224 0.4093984001168845 4 {I|L}D 2 -1 14.776 0.0 0.0 1.6001 0.0 0.0 250.0945854723932 442.2413824476199 692.335967920013 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}D 1.6001 - 47 + 1 1.405 74920.6 1.0 6176 4682 10850 HBL1_DMSO_200M_050219_2,10860 HBL1_DMSO_200M_050219_2,10860,YSRSGELI False False SYLDARSL 58.659286 462.74312132597 1725362.0 10850.0 nc|ENSG00000072803|Q9UKB1-2|FBXW11;;nc|ENSG00000072803|Q9UKB1-3|FBXW11;;nc|ENSG00000072803|Q9UKB1|FBXW11;;ENSG00000072803|ENST00000517395|FBXW11 3.32451860109965 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10861 58.662 143.0 375300.0 25 0 24824.0 + 26965 PEEALVQQV 9 80 506.7699958812751 0 506.7695190310478 PEAK CID FTMS 0 0 0 10850 190823.859375 0.8630989088371064 -1 0.1491737365722656 11 Unmodified _PEEALVQQV_ REV__ENST00000525250.5_1_11:820874-821186:+|nuORF 21.74664581756881 0.185237546287679 4 QA{I|L}GE 5 -1 21.058 0.0 0.0 2.0818 0.0 0.0 287.18908736626275 223.07209192447505 510.2611792907378 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QA{I|L}GE 2.0818 - 89 + 1 1.405 51418.9 1.0 6177 4682 10850 HBL1_DMSO_200M_050219_2,10861 HBL1_DMSO_200M_050219_2,10861,PEEALVQQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10862 58.666 194.0 305190.0 25 0 28553.0 + 4020 DALRSGLTV 9 87 466.2639604463565 930.5133679595132 2 466.2648193240166 MULTI CID FTMS 0 0 0 10850 183181.3125 0.0009300517568723 28 -2.885562896728516 12 Unmodified _DALRSGLTV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 36.506200033944 0.094635877243972 4 {[DA]|[EG]}[R{I|L}][SG]{I|L}TV 9 0 + 43.576 0.0 0.0 4.683 4.683 71.692 0.0 0.0 0.0 2.896742306421835 14.490784316185678 2.896742306421835 2.896742306421835 0 1.305462187404089 1.5228787452803376 0.6050541008457975 0.0 + + {[DA]|[EG]}[R{I|L}][SG]{I|L}TV;{[QN]|[E{I|L}]|[KN]}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TV;{[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;[Q{I|L}]T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;[AG]{I|L}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;[{I|L}P]E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TV;{[SA]|[TG]}[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TV;{[DA]|[EG]}[R{I|L}][KT]EV;{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}[SG]{I|L}TV;{[CP]|[EA]}[RV][SG]{I|L}TV 4.683;4.3717;4.1047;3.8098;3.6469;3.4635;3.3763;3.126;2.9809;2.1072 +;-;-;-;-;-;-;-;-;- + 188 1 1.405 50584.6 1.0 6178 4682 10850 HBL1_DMSO_200M_050219_2,10862 HBL1_DMSO_200M_050219_2,10862,DALRSGLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10863 58.674 453.0 367740.0 25 0 73801.0 + 9831 FPEEEWRHV 9 133 410.1964458952241 1227.5675082858722 3 410.5303527712822 MULTI CID FTMS 0 0 0 10850 178451.046875 0.5446624603349391 -7 0.7736968994140625 13 Unmodified _FPEEEWRHV_ ENSG00000197037|ENST00000394152|ZSCAN25;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 65.23502041540118 0.0231836506122253 4 {M(Oxidation (M))|F}PEEEWRHV 9 0 + 68.268 0.0 0.0 5.5612 5.5612 78.239 0.0 0.0 0.0 7.501225267834002 4.471580313422194 4.471580313422194 4.471580313422194 0 0.2302046884880938 0.0 1.1307196863200843 0.3054621874040891 + + {M(Oxidation (M))|F}PEEEWRHV;{M(Oxidation (M))|F}PEEEWRVH;[EP]EEW[{I|L}T]PVE;[EP]EEW[{I|L}T]VPE;{M(Oxidation (M))|F}PEEEV[WR]H;EEPEW[{I|L}T]PVE;{M(Oxidation (M))|F}PEVEWWHV;{M(Oxidation (M))|F}PEEVWWHV;EEPEW[{I|L}T]VPE;{M(Oxidation (M))|F}PEEVE[WR]H 5.5612;5.197;4.8552;4.7154;4.2389;4.0186;3.9495;3.9459;3.8788;3.8502 +;-;-;-;-;-;-;-;-;- + 2140 + 1 1.405 133044.9 1.0 6179 4682 10850 HBL1_DMSO_200M_050219_2,10863 HBL1_DMSO_200M_050219_2,10863,FPEEEWRHV True True FPEEEWRHV 58.673891 410.530352771282 43581726.0 10850.0 ENSG00000197037|ENST00000394152|ZSCAN25;;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 9.584925492604574 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10864 58.688 800.0 97330.0 25 0 4304.3 -1 0 96 921.7079784806537 2762.1021060421604 3 922.0431396365166 MULTI CID FTMS 0 0 0 10850 176517.921875 1.0 0 0.0 14 4 {[CP]|[EA]}NDYTQ 7 -1 47.791 0.0 0.0 1.7302 0.0 0.0 0.0 1937.7548269306888 1937.7548269306888 23.068882425728106 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.4247425010840047 {[CP]|[EA]}NDYTQ 1.7302 - 322 + 1 1.405 60525.1 0.7799999713897705 6180 4682 10850 HBL1_DMSO_200M_050219_2,10864 HBL1_DMSO_200M_050219_2,10864, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10865 58.703 800.0 263220.0 25 0 26266.0 + 2646 ATAYFSSFSAY 11 190 607.7705147756865 1213.5264766181729 2 607.7704955935478 MULTI CID FTMS 0 0 0 10850 161549.8125 0.545800422168079 -1 0.1491737365722656 15 Unmodified _ATAYFSSFSAY_ ENST00000525264.5_1_11:64981802-64993164:+|nuORF;nc|ENSG00000197847|A6NK97-2|SLC22A20P;nc|ENSG00000197847|A6NK97|SLC22A20P 24.020572477871973 0.5281922720044371 4 [H{I|L}]Q{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S]{M(Oxidation (M))|F}{I|L}Y 9 7 + 47.106 0.0 0.0 3.8818 3.8818 63.782 0.0 0.0 0.0 0.2225486466124664 11.765997036641592 0.2225486466124664 0.2225486466124664 0 0.5 0.9208187539523752 1.174742501084005 0.7742275032520141 [H{I|L}]Q{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S]{M(Oxidation (M))|F}{I|L}Y;[HQ]{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S]{M(Oxidation (M))|F}{I|L}Y;[HQ]{M(Oxidation (M))|F}[EC]Q{M(Oxidation (M))|F}{I|L}Y;[H{I|L}]Q{[ES]|[DT]|[{I|L}C]}{[YC]|[HE]}TAY;[HQ]{I|L}{[ES]|[DT]|[{I|L}C]}{[YC]|[HE]}TAY;[HQ]{M(Oxidation (M))|F}[EC]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}AY;[H{I|L}]Q{[ES]|[DT]|[{I|L}C]}T{[YC]|[HE]}AY;[HQ]{M(Oxidation (M))|F}{I|L}[HS][DP]AY;[HQ]{I|L}{[ES]|[DT]|[{I|L}C]}T{[YC]|[HE]}AY;[H{I|L}]Q{M(Oxidation (M))|F}[YC(Carbamidomethyl (C))]{I|L}AY 3.8818;3.8634;3.7924;3.568;3.5497;3.4876;3.4628;3.4546;3.4445;3.4099 -;-;-;-;-;-;-;-;-;- 5048 1 1.405 153774.6 0.8299999833106995 6181 4682 10850 HBL1_DMSO_200M_050219_2,10865 HBL1_DMSO_200M_050219_2,10865,ATAYFSSFSAY False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 10866 58.717 800.0 160730.0 25 0 13577.0 + 36446 SYYPTSSSTSF 11 155 613.7643987097396 1225.514244486279 2 613.7643310427666 MULTI CID FTMS 0 0 0 10850 154215.8125 1.0 0 0.0 16 Unmodified _SYYPTSSSTSF_ ENSG00000102119|ENST00000369842|EMD;ENST00000471965.1_1_X:153609106-153609554:+|nuORF 26.268140514670165 0.4754186812857754 4 [EP]QSV[KG]EEP 10 10 49.548 0.0 0.0 4.043 0.0 0.0 0.0 141.99737371895404 141.99737371895404 25.09348008424516 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9436726795685342 0.4247425010840047 [EP]QSV[KG]EEP 4.043 - 1778 1 1.405 98464.1 0.7699999809265137 6182 4682 10850 HBL1_DMSO_200M_050219_2,10866 HBL1_DMSO_200M_050219_2,10866,SYYPTSSSTSF False True SYYPTSSSTSF 58.716576 613.764331042767 1445965.875 10850.0 ENSG00000102119|ENST00000369842|EMD;;ENST00000471965.1_1_X:153609106-153609554:+|nuORF 4.755843798319499 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10867 58.723 372.0 275550.0 25 0 15494.0 + 30153 QVPEEQVLNAA 11 108 599.3094559880058 1196.6043590428114 2 599.3090698122978 MULTI CID FTMS 0 0 0 10850 148089.5 0.3198773104694481 -1 0.1491737365722656 17 Unmodified _QVPEEQVLNAA_ ENSG00000160813|ENST00000292330|PPP1R35 86.33184430468982 0.0029476721545555 4 [EP]EQVQV{I|L}QQ 10 7 + 73.958 0.0 0.0 6.1807 6.1807 80.087 0.0 0.0 0.0 3.988354624809787 4.259687322722812 3.988354624809787 3.988354624809787 0 0.6861818737241735 0.6575773191777937 1.4802046884880935 0.7302046884880937 [EP]EQVQV{I|L}QQ;{[QV]|[N{I|L}]|[RA]|[KV]}PEEQV{I|L}QQ;[EP]EQV{I|L}N{I|L}QQ;[EP]EQV[AG]V{I|L}QQ;[EP]E[AG]VQV{I|L}QQ;{[QV]|[N{I|L}]|[RA]|[KV]}PEE{I|L}N{I|L}QQ;{[QV]|[N{I|L}]|[RA]|[KV]}PEE[AG]V{I|L}QQ;[EP]EQVQ{I|L}VQQ;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP]VQV{I|L}QQ;[EP]EQV{I|L}GG{I|L}QQ 6.1807;5.8474;5.427;5.4148;5.1595;5.0937;5.0815;4.7491;4.7057;4.6611 -;-;-;-;-;-;-;-;-;- 2149 1 1.405 83683.2 1.0 6183 4682 10850 HBL1_DMSO_200M_050219_2,10867 HBL1_DMSO_200M_050219_2,10867,QVPEEQVLNAA True True QVPEEQVLNAA 58.723268 599.309069812298 4111497.5 10850.0 ENSG00000160813|ENST00000292330|PPP1R35 4.779840310414632 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10868 58.738 800.0 218600.0 25 0 49671.0 -1 0 79 1118.7732796209357 3353.2980094630066 3 1119.106616199017 MULTI CID FTMS 0 0 0 10850 124808.484375 0.2787453529023426 -2 0.2177467346191406 18 4 YG{[YC]|[HE]}T{I|L}TTT[R{M(Oxidation (M))|F}][C(Carbamidomethyl (C))S] 13 -1 35.562 0.0 0.0 1.0605 0.0 0.0 1781.6461062421065 0.0 1781.6461062421065 0.0 8.83535707603567 0.0 0.0 0 0.0 0.0 1.360924374808178 1.960409376976188 YG{[YC]|[HE]}T{I|L}TTT[R{M(Oxidation (M))|F}][C(Carbamidomethyl (C))S] 1.0605 - 1107 + 1 1.405 147178.5 0.5 6184 4682 10850 HBL1_DMSO_200M_050219_2,10868 HBL1_DMSO_200M_050219_2,10868, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10869 58.75 670.0 230220.0 25 0 27211.0 + 26845 PASPHVML 8 171 426.2253419054365 850.4361308776729 2 426.2250854372978 MULTI CID FTMS 0 0 0 10850 99945.015625 0.30150045056693 2 -0.1930961608886718 19 Unmodified _PASPHVML_ REV__ENSG00000254585|ENST00000650528|MAGEL2 6.354104778181461 0.7857632046190106 4 VM{I|L} 3 -1 13.231 0.0 0.0 1.5558 0.0 0.0 489.2363874495891 0.0 489.2363874495891 0.0 0.7572071393811814 0.0 0.0 0 0.0 0.0 0.0 0.0 VM{I|L} 1.5558 + + 92 + 1 1.405 120496.3 1.0 6185 4682 10850 HBL1_DMSO_200M_050219_2,10869 HBL1_DMSO_200M_050219_2,10869,PASPHVML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10871 58.755 15.0 3901900.0 25 0 301920.0 + 38200 TPRHIIVRF 9 97 380.2327029314581 1137.6762793945743 3 380.2324096560478 MULTI CID FTMS 0 0 0 10870 2183099.0 0.1697671022295327 2 -0.2284431457519531 1 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 18.721224879955976 0.3299216912490967 4 {I|L}{I|L}VR{M(Oxidation (M))|F} 5 4 25.233 0.0 0.0 2.2179 0.0 0.0 491.26247431820553 0.0 491.26247431820553 0.0 4.2635547077397895 0.0 0.0 0 0.75 0.0 0.0 0.2614393726401688 + {I|L}{I|L}VR{M(Oxidation (M))|F} 2.2179 + + 98 + 1 1.425 53597.6 1.0 6186 4683 10870 HBL1_DMSO_200M_050219_2,10871 HBL1_DMSO_200M_050219_2,10871,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10872 58.756 14.0 3981800.0 25 0 318120.0 + 22117 LPPPVQTQI 9 85 496.7926827535134 991.5708125738269 2 496.7926818728447 MULTI CID FTMS 0 0 0 10870 3915763.0 0.9807469180429408 1 -0.0653533935546875 2 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 48.345845343767074 0.0439967357579942 4 [{I|L}P]PPVQD{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 51.716 0.0 0.0 5.2155 5.2155 74.391 0.0 0.0 0.0 25.6424927368726 34.50955568120187 25.6424927368726 3.0102999566398125 0 0.6643943297944485 2.0 0.0 0.0 [{I|L}P]PPVQD{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPN{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPV[AG]D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPGG{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]P{[QV]|[N{I|L}]|[RA]|[KV]}PD{[QV]|[N{I|L}]|[RA]|[KV]};[VP]PP{I|L}QD{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PY[Y{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]};[VP]PPQ{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[VP]PP{I|L}[AG]D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]P{[QV]|[N{I|L}]|[RA]|[KV]}[QT][{I|L}P] 5.2155;4.912;4.2869;3.9833;3.2268;2.5251;2.3318;2.2215;1.5964;1.4247 -;-;-;-;-;-;-;-;-;- 505 1 1.425 48635.6 1.0 6187 4683 10870 HBL1_DMSO_200M_050219_2,10872 HBL1_DMSO_200M_050219_2,10872,LPPPVQTQI True True LPPPVQTQI 58.755936 496.792681872845 328086040.0 10870.0 ENST00000511107.1_1_5:60241248-60448779:+|nuORF;;ENSG00000164182|ENST00000296597|NDUFAF2 5.193147977193196 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10873 58.757 25.0 2737000.0 25 0 467120.0 + 21308 LPEPSIRSV 9 69 499.2875991042045 996.560645275209 2 499.2875854372978 MULTI CID FTMS 0 0 0 10870 2302299.0 1.0 0 0.0 3 Unmodified _LPEPSIRSV_ ENSG00000100077|ENST00000324198|GRK3;ENSG00000173020|ENST00000308595|GRK2 43.77239144664712 0.0547478964384323 4 {I|L}PEP 4 5 64.157 0.0 0.0 6.4378 0.0 0.0 0.0 557.3055625562386 557.3055625562386 49.156687756324686 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.8494850021680094 0.0 + {I|L}PEP 6.4378 + + 58 + 1 1.425 58817.7 1.0 6188 4683 10870 HBL1_DMSO_200M_050219_2,10873 HBL1_DMSO_200M_050219_2,10873,LPEPSIRSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10874 58.759 62.0 1195900.0 25 0 157580.0 -1 0 92 909.0598697049136 2724.1577797149407 3 909.3947631716728 MULTI CID FTMS 0 0 0 10870 1637105.375 0.624746725776547 1 -0.0653533935546875 4 4 [YG]S{[NV]|[RG]}SQ[TP]YA 11 -1 42.808 0.0 0.0 1.5714 0.0 0.0 0.0 1553.6360261351158 1553.6360261351158 13.010851361097227 0.0 0.0 0.0 0 0.0 2.0 1.4559771852360797 0.6989700043360187 [YG]S{[NV]|[RG]}SQ[TP]YA 1.5714 - 7687 1 1.425 59260.1 1.0 6189 4683 10870 HBL1_DMSO_200M_050219_2,10874 HBL1_DMSO_200M_050219_2,10874, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10875 58.76 37.0 1524000.0 25 0 210730.0 + -1 EPSLICSC 8 88 483.20656199592935 964.3985710586588 2 483.2071105837822 MULTI CID FTMS 0 0 0 10870 1513466.75 0.6004162144106231 2 -0.2284431457519531 5 2 Carbamidomethyl (C) _EPSLIC(Carbamidomethyl (C))SC(Carbamidomethyl (C))_ REV__ENST00000367409.8_1_1:197061115-197062200:-|nuORF 19.438996006549623 0.6237395211498085 4 [EP]S{I|L}[MT][C(Carbamidomethyl (C))Q] 8 -1 + 30.56 0.0 0.0 3.1689 3.1689 78.45 0.0 0.0 0.0 3.3688385460933645 0.109953843014626 0.109953843014626 16.989700043360187 0 0.0 0.8860566476931632 0.805462187404089 0.0 [EP]S{I|L}[MT][C(Carbamidomethyl (C))Q];[TP]D{I|L}[MT][C(Carbamidomethyl (C))Q];{[TV]|[{I|L}S]}[EP][MT][C(Carbamidomethyl (C))Q] 3.1689;1.4072;0.71971 -;-;- 77 1 1.425 49583.6 1.0 6190 4683 10870 HBL1_DMSO_200M_050219_2,10875 HBL1_DMSO_200M_050219_2,10875,EPSLICSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10876 58.761 40.0 2395100.0 25 0 966320.0 -1 0 79 398.1578355641468 397.1505590975468 1 398.1575195193291 MULTI CID FTMS 0 0 0 10870 1301590.25 0.5673248348023442 -3 0.345489501953125 6 4 V 1 -1 12.764 0.0 0.0 3.2139 0.0 0.0 280.07122667742806 0.0 280.07122667742806 0.0 0.924734115259472 0.0 0.0 0 0.0 0.0 0.0 0.0 V 3.2139 - 29 + 1 1.425 79389.3 1.0 6191 4683 10870 HBL1_DMSO_200M_050219_2,10876 HBL1_DMSO_200M_050219_2,10876, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10877 58.763 69.0 687310.0 25 0 59702.0 + 29174 QFYDNKGITY 10 84 624.7984229598308 1247.5822929864614 2 624.7989379763603 MULTI CID FTMS 0 0 0 10870 863878.1875 0.4154183224831669 1 -0.0653533935546875 7 Unmodified _QFYDNKGITY_ ENSG00000152455|ENST00000354919|SUV39H2;nc|ENSG00000152455|Q9H5I1-2|SUV39H2;nc|ENSG00000152455|Q9H5I1-3|SUV39H2 29.84058131909904 0.2982332456971691 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YDN 5 5 36.884 0.0 0.0 2.9564 0.0 0.0 0.0 577.2992037408811 577.2992037408811 4.846021497046372 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.2887254899964357 0.0 + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YDN 2.9564 + + 292 + 1 1.425 42446.0 1.0 6192 4683 10870 HBL1_DMSO_200M_050219_2,10877 HBL1_DMSO_200M_050219_2,10877,QFYDNKGITY False True QFYDNKGITY 58.762684 624.79893797636 30549274.0 10870.0 ENSG00000152455|ENST00000354919|SUV39H2;;nc|ENSG00000152455|Q9H5I1-2|SUV39H2;;nc|ENSG00000152455|Q9H5I1-3|SUV39H2 7.837631066640218 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10878 58.764 50.0 1088900.0 25 0 79121.0 + 25096 MPYEDIRNV 9 60 568.7740665237933 1135.5335801143865 2 568.7742187380791 MULTI CID FTMS 0 0 0 10870 723372.25 1.0 0 0.0 8 Unmodified _MPYEDIRNV_ ENSG00000147202|ENST00000324765|DIAPH2;nc|ENSG00000147202|O60879-2|DIAPH2;nc|ENSG00000147202|O60879-3|DIAPH2 26.268140514670165 0.1969607489560049 4 MPYED{I|L} 6 3 61.508 0.0 0.0 5.4167 0.0 0.0 0.0 384.1984957330688 384.1984957330688 31.330605138445392 0.0 0.0 0.0 0 0.7887254899964358 1.6989700043360187 0.0 0.0 + MPYED{I|L} 5.4167 + + 107 + 1 1.425 47481.3 1.0 6193 4683 10870 HBL1_DMSO_200M_050219_2,10878 HBL1_DMSO_200M_050219_2,10878,MPYEDIRNV False True MPYEDIRNV 58.764015 568.774218738079 5890965.0 10870.0 ENSG00000147202|ENST00000324765|DIAPH2;;nc|ENSG00000147202|O60879-2|DIAPH2;;nc|ENSG00000147202|O60879-3|DIAPH2 5.912152449289958 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10879 58.765 41.0 935670.0 25 0 45057.0 + 39440 VANRYFTTV 9 87 535.7848300740287 1069.5551072148571 2 535.7852050662041 MULTI CID FTMS 0 0 0 10870 671504.0 0.8238554734226912 -1 0.1277427673339843 9 Unmodified _VANRYFTTV_ ENSG00000165219|ENST00000297933|GAPVD1;ENST00000467707.1_1_9:128116999-128121864:+|nuORF;ENST00000474637.5_1_9:128108952-128125022:+|nuORF;nc|ENSG00000165219|Q14C86-3|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;nc|ENSG00000165219|Q14C86-5|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1;nc|ENSG00000165219|Q14C86|GAPVD1 56.17704186161178 0.0281986971544335 4 {[VA]|[{I|L}G]}[RN]Y{M(Oxidation (M))|F}TTV 9 0 + 52.674 0.0 0.0 4.9248 4.9248 85.794 0.0 0.0 0.0 10.690994508631348 34.41753481464637 10.690994508631348 33.75524478413823 0 0.9247425010840048 1.3979400086720375 0.805462187404089 0.0 + + {[VA]|[{I|L}G]}[RN]Y{M(Oxidation (M))|F}TTV;[PS]V[PS][WP]TTV 4.9248;1.7688 +;- + 102 1 1.425 35666.0 1.0 6194 4683 10870 HBL1_DMSO_200M_050219_2,10879 HBL1_DMSO_200M_050219_2,10879,VANRYFTTV True True VANRYFTTV 58.765194 535.785205066204 5668411.0 10870.0 ENSG00000165219|ENST00000297933|GAPVD1;;nc|ENSG00000165219|Q14C86-6|GAPVD1;;nc|ENSG00000165219|Q14C86-3|GAPVD1;;ENST00000474637.5_1_9:128108952-128125022:+|nuORF;;nc|ENSG00000165219|Q14C86-5|GAPVD1;;nc|ENSG00000165219|Q14C86-4|GAPVD1;;ENST00000467707.1_1_9:128116999-128121864:+|nuORF;;nc|ENSG00000165219|Q14C86|GAPVD1 5.246338367462158 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10880 58.767 106.0 495400.0 25 0 70873.0 + 1381 ALAEKFKEL 9 85 524.8050830033019 1047.5956130734037 2 524.8056518435478 MULTI CID FTMS 0 0 0 10870 508384.34375 0.0666930058475588 3 -0.3324851989746094 10 Unmodified _ALAEKFKEL_ ENSG00000124541|ENST00000244496|RRP36;nc|ENSG00000124541|Q96EU6-2|RRP36 29.84058131909904 0.1515068451768857 4 A{I|L}AEK{M(Oxidation (M))|F}{[SA]|[TG]}{I|L}V 10 3 + 68.822 0.0 0.0 6.5696 6.5696 75.402 0.0 0.0 0.0 31.43630343715329 0.6694678963061307 0.6694678963061307 0.6694678963061307 0 1.1989700043360187 2.0 0.0 0.0 A{I|L}AEK{M(Oxidation (M))|F}{[SA]|[TG]}{I|L}V;A{I|L}AEK{M(Oxidation (M))|F}{[SA]|[TG]}V{I|L};A{I|L}AEK{M(Oxidation (M))|F}[VG]T{I|L};[{I|L}A]AM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}V;[{I|L}A]A[YG]K[DV]{I|L}V;[{I|L}A][YG]AK[DV]{I|L}V;[{I|L}A][YQ]K[DV]{I|L}V;[{I|L}A][WP]{[HG]|PP}R{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAK[DV]{I|L}V;{[CP]|[EA]}K[VP]HR{I|L}V 6.5696;6.5057;5.6011;3.5688;3.0696;2.6642;2.6154;2.1599;1.2991;0.63741 -;-;-;-;-;-;-;-;-;- 480 + 1 1.425 48192.5 1.0 6195 4683 10870 HBL1_DMSO_200M_050219_2,10880 HBL1_DMSO_200M_050219_2,10880,ALAEKFKEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10881 58.771 157.0 532640.0 25 0 72261.0 41382 VPKTPVEI 8 94 441.7683182352048 881.5220835372097 2 441.7683593630791 MULTI CID FTMS 0 0 0 10870 490720.90625 0.5506028940203309 -21 1.7625885009765625 11 Unmodified _VPKTPVEI_ ENST00000529587.1_1_11:9806704-9806878:-|nuORF 46.020951573049366 0.1579632664462935 4 VP{I|L}{I|L}{M(Oxidation (M))|F}SPG 8 6 66.675 0.0 0.0 7.5637 0.0 0.0 0.0 68.05126367740468 68.05126367740468 50.12070344032047 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8807196863200843 0.0 VP{I|L}{I|L}{M(Oxidation (M))|F}SPG 7.5637 - 415 + 1 1.425 70871.4 1.0 6196 4683 10870 HBL1_DMSO_200M_050219_2,10881 HBL1_DMSO_200M_050219_2,10881,VPKTPVEI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10882 58.772 46.0 1093700.0 25 0 69834.0 + 1144 AGVSNTVQQV 10 92 501.766141568671 1001.517730204142 2 501.7645141482353 MULTI CID FTMS 0 0 0 10870 484236.03125 0.6126925840153636 -2 0.27691650390625 12 Unmodified _AGVSNTVQQV_ REV__ENSG00000006788|ENST00000252172|MYH13 22.736283301280096 0.4578556481593033 4 [VS]QKDAQ{[QV]|[N{I|L}]|[RA]|[KV]} 9 -1 + 32.461 0.0 0.0 3.2412 3.2412 66.351 0.0 0.0 0.0 1.2840808820180951 3.2572071393811832 1.2840808820180951 2.4417382070186093 0 0.25 1.3010299956639813 0.6861818737241735 0.0 [VS]QKDAQ{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VSKDAQ{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}V]{[ET]|[MV]}DAQ{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}DAQ{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}V]{[ET]|[MV]}WQ{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}WQ{[QV]|[N{I|L}]|[RA]|[KV]};[VS]Q{[RE]|[WV]}{I|L}A{[CP]|[EA]};[VS][AG]KDAQ{[QV]|[N{I|L}]|[RA]|[KV]};[VS]QKDA[AG]{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VS{[RE]|[WV]}{I|L}A{[CP]|[EA]} 3.2412;2.9974;2.8267;2.7196;2.6562;2.5492;2.3727;2.3217;2.3217;2.1289 -;-;-;-;-;-;-;-;-;- 793 1 1.425 43458.3 1.0 6197 4683 10870 HBL1_DMSO_200M_050219_2,10882 HBL1_DMSO_200M_050219_2,10882,AGVSNTVQQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10883 58.775 189.0 392090.0 25 0 44348.0 38705 TTSAGQKTTL 10 108 504.2742745635744 1006.5339961939488 2 504.2743102908134 MULTI CID FTMS 0 0 0 10870 327077.0625 1.0 0 0.0 13 Unmodified _TTSAGQKTTL_ ENST00000584531.1_1_18:14972398-14972626:+|nuORF 43.77239144664712 0.1177314611616471 4 [{I|L}T][DC]K{I|L}TT{I|L} 9 6 + 61.309 0.0 0.0 6.0911 6.0911 75.626 0.0 0.0 0.0 5.228787452803374 14.973024840566469 5.228787452803374 1.7609125905568137 0 0.9247425010840048 1.5228787452803376 1.0 0.0 [{I|L}T][DC]K{I|L}TT{I|L};[{I|L}T][DC]{I|L}KTT{I|L};{[QN]|[E{I|L}]|[KN]}[CS]K{I|L}TT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DKG{I|L}TT{I|L};{[QN]|[E{I|L}]|[KN]}[CS]{I|L}KTT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DGK{I|L}TT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DG{I|L}KTT{I|L};[PS][YR]G{I|L}TT{I|L};[VS][MD]K{I|L}TT{I|L};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RTT{I|L} 6.0911;5.9161;5.5716;5.5665;5.3967;5.3688;5.1939;4.9454;4.5519;4.5326 -;-;-;-;-;-;-;-;-;- 882 1 1.425 60320.6 1.0 6198 4683 10870 HBL1_DMSO_200M_050219_2,10883 HBL1_DMSO_200M_050219_2,10883,TTSAGQKTTL True False KPYDGITTI 58.77544 504.274310290813 3352277.75 10870.0 ENSG00000141027|ENST00000268712|NCOR1;;nc|ENSG00000141027|O75376-2|NCOR1 2.676522254943848 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10884 58.778 114.0 596970.0 25 0 45014.0 + 44679 YPFKPPKV 8 93 488.2868778785377 974.5592028238756 2 488.2866088747978 MULTI CID FTMS 0 0 0 10870 311559.53125 0.0102461409602894 8 -0.885955810546875 14 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 30.22481116460888 0.4082965392918993 4 YP{M(Oxidation (M))|F}KV 5 3 56.81 0.0 0.0 5.8293 0.0 0.0 0.0 337.1888521783813 337.1888521783813 37.10068688737465 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YP{M(Oxidation (M))|F}KV 5.8293 - 249 + 1 1.425 55693.5 1.0 6199 4683 10870 HBL1_DMSO_200M_050219_2,10884 HBL1_DMSO_200M_050219_2,10884,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10885 58.783 284.0 465700.0 25 0 46498.0 + 6683 EAYVQKLV 8 117 475.27180417085367 948.5290554085074 2 475.2714416384697 MULTI CID FTMS 0 0 0 10870 303107.03125 0.5767707107746799 -2 0.27691650390625 15 Unmodified _EAYVQKLV_ ENSG00000158246|ENST00000289166|TENT5B;ENSG00000183508|ENST00000369448|TENT5C 63.562846038646086 0.116059504757595 4 {[CP]|[EA]}YVQK{I|L}V 8 0 + 43.739 0.0 0.0 4.6112 4.6112 75.539 0.0 0.0 0.0 6.989700043360188 5.56302500767287 5.56302500767287 5.56302500767287 0 0.5629529932484498 0.0 0.0 0.3494850021680094 + + {[CP]|[EA]}YVQK{I|L}V;{[CP]|[EA]}YVQKV{I|L};{[CP]|[EA]}YV[AG]K{I|L}V;{[CP]|[EA]}YV[AG]KV{I|L};[KQ]{I|L}VY[W{I|L}];[YV]QK{I|L}[W{I|L}];[KQ]V{I|L}Y[W{I|L}];[YV]{[NV]|[RG]}R[W{I|L}];[YV][AG]K{I|L}[W{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}Y[W{I|L}] 4.6112;4.0247;3.6347;3.0482;2.1007;2.0214;1.626;1.2306;1.0377;1.0028 +;-;-;-;-;-;-;-;-;- + 288 + 1 1.425 104127.5 1.0 6200 4683 10870 HBL1_DMSO_200M_050219_2,10885 HBL1_DMSO_200M_050219_2,10885,EAYVQKLV True True EAYVQKLV 58.783046 475.27144163847 4540642.0 10870.0 ENSG00000183508|ENST00000369448|TENT5C;;ENSG00000158246|ENST00000289166|TENT5B 5.0065131187438965 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10886 58.785 69.0 636080.0 25 0 37295.0 34677 SPRTATTLPV 10 89 521.7984127211165 1041.582272509033 2 521.7973510622978 MULTI CID FTMS 0 0 0 10870 356508.1875 1.0 0 0.0 16 Unmodified _SPRTATTLPV_ ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B;ENSG00000117983|ENST00000529681|MUC5B 19.256988751693697 0.5244284437930726 4 [VG]PSTA 6 8 38.778 0.0 0.0 3.723 0.0 0.0 0.0 526.2979830377561 526.2979830377561 11.101817685642018 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 [VG]PSTA 3.723 - 49 + 1 1.425 41199.3 1.0 6201 4683 10870 HBL1_DMSO_200M_050219_2,10886 HBL1_DMSO_200M_050219_2,10886,SPRTATTLPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10887 58.793 457.0 330030.0 25 0 33881.0 + 1590 ALLGKIEKV 9 155 485.8184171760549 0 485.8184081912041 PEAK CID FTMS 0 0 0 10870 230400.0625 1.0 0 0.0 17 Unmodified _ALLGKIEKV_ ENSG00000143641|ENST00000366672|GALNT2;nc|ENSG00000143641|Q10471-2|GALNT2 59.36838082759317 0.0175329919373393 4 {I|L}{I|L}GK{I|L}EK 7 2 42.535 0.0 0.0 4.3867 0.0 0.0 71.03801226136268 114.05635248355702 185.0943647449197 0.0 0.0 0.0 0.0 0 1.7658715643802767 0.0 0.75 0.1237125054200235 + {I|L}{I|L}GK{I|L}EK 4.3867 + + 1376 + 1 1.425 115509.2 1.0 6202 4683 10870 HBL1_DMSO_200M_050219_2,10887 HBL1_DMSO_200M_050219_2,10887,ALLGKIEKV True True ALLGKIEKV 58.792788 485.818408191204 1483626.25 10870.0 nc|ENSG00000143641|Q10471-2|GALNT2;;ENSG00000143641|ENST00000366672|GALNT2 4.199318250020345 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10888 58.796 188.0 533250.0 25 0 93441.0 + 9388 FISEFEHRV 9 93 388.5332356637562 1162.577877591469 3 388.5328857302666 MULTI CID FTMS 0 0 0 10870 224627.796875 0.7659439945059014 -1 0.1277427673339843 18 Unmodified _FISEFEHRV_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF 39.94969957227396 0.0757326808254658 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EH[RV] 9 0 + 48.35 0.0 0.0 4.1589 4.1589 49.245 0.0 0.0 0.0 7.147642715192504 0.0 0.0 0.0 0 0.25 0.0 0.75 0.4247425010840047 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EH[RV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EV[RH];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}VE[RH];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SEV{M(Oxidation (M))|F}E[RH];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}[YK]{[ET]|[MV]};[RH][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}ES{[QN]|[E{I|L}]|[KN]};{[MG]|[TS]}[QA]{[TV]|[{I|L}S]}VES{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}E[RH];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}T][RV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{[ES]|[DT]|[{I|L}C]}[RP][C(Carbamidomethyl (C))R] 4.1589;4.1589;3.3821;2.8434;2.4627;1.924;1.6188;1.1692;0.2047;0.030183 +;-;-;-;-;-;-;-;-;- + 253 + 1 1.425 85603.5 1.0 6203 4683 10870 HBL1_DMSO_200M_050219_2,10888 HBL1_DMSO_200M_050219_2,10888,FISEFEHRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10889 58.801 274.0 496760.0 25 0 52847.0 + 39949 VGAFGGRH 8 119 400.7129056787518 0 400.7129394412041 PEAK CID FTMS 0 0 0 10870 213747.375 0.3923015271155378 -2 0.27691650390625 19 Unmodified _VGAFGGRH_ REV__ENSG00000185105|ENST00000409745|MYADML2 0.7936320650641473 0.5979579398327216 4 {M(Oxidation (M))|F}TK 3 -1 19.517 0.0 0.0 2.4414 0.0 0.0 292.1055336883146 128.07198511295158 420.17751880126616 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.25 {M(Oxidation (M))|F}TK 2.4414 - 48 + 1 1.425 110038.0 1.0 6204 4683 10870 HBL1_DMSO_200M_050219_2,10889 HBL1_DMSO_200M_050219_2,10889,VGAFGGRH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10890 58.815 800.0 63070.0 25 0 17509.0 -1 0 23 1169.4817242422305 3505.423343326891 3 1170.150927722454 MULTI CID FTMS 0 0 0 10870 191895.359375 0.6060745420230595 1 -0.0653533935546875 20 4 E 1 -1 6.9897 0.0 0.0 0.1994 0.0 0.0 2849.197320739428 524.1610201471311 3373.358340886559 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.1994 - 1 + 1 1.425 49693.4 0.6000000238418579 6205 4683 10870 HBL1_DMSO_200M_050219_2,10890 HBL1_DMSO_200M_050219_2,10890, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10892 58.832 800.0 184540.0 25 0 12517.0 -1 0 120 881.912173304008 1761.809793674816 2 881.9135619997978 MULTI CID FTMS 0 0 0 10891 176567.53125 0.7242983175414093 2 -0.2671318054199219 1 4 [NP]{I|L}N{[CA]|SS}[H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 71.57 0.0 0.0 4.0623 4.0623 71.171 0.0 0.0 0.0 7.931825014007217 36.34012462059836 7.931825014007217 3.6991128507179374 0 1.305462187404089 0.9208187539523752 0.0 1.548455006504028 [NP]{I|L}N{[CA]|SS}[H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[KT]{[YC]|[HE]}EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}[C(Carbamidomethyl (C))Q][H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]QN{[CA]|SS}[H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]QN[KT]{[YC]|[HE]}EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}GRQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]Q[C(Carbamidomethyl (C))Q][H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[H{I|L}][RH][WD];[NP]{I|L}N{I|L}C(Carbamidomethyl (C))[YR]EV{[QN]|[E{I|L}]|[KN]}{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{[WT]|[RM]}{[SA]|[TG]}EVRAEE 4.0623;3.8523;3.4831;3.4238;3.2138;2.9904;2.8446;2.7066;1.9369;1.7458 -;-;-;-;-;-;-;-;-;- 1412 1 1.425 99796.4 0.8100000023841858 6206 4684 10891 HBL1_DMSO_200M_050219_2,10892 HBL1_DMSO_200M_050219_2,10892, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10893 58.833 29.0 3130500.0 25 0 440420.0 + 41129 VPAALKVV 8 96 398.768314767693 795.5220766021861 2 398.7681152224541 MULTI CID FTMS 0 0 0 10891 2119881.75 0.352647385926139 -1 0.0653533935546875 2 Unmodified _VPAALKVV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 74.39630413441286 0.1057069479668299 4 VPAA{I|L}KVV 8 0 + 59.177 0.0 0.0 7.4388 7.4388 95.954 0.0 0.0 0.0 31.82048784621223 15.354575339208624 15.354575339208624 59.177025540663806 0 1.721848749616356 1.5228787452803376 0.0 0.0 + + VPAA{I|L}KVV 7.4388 + + 194 + 1 1.425 76587.7 1.0 6207 4684 10891 HBL1_DMSO_200M_050219_2,10893 HBL1_DMSO_200M_050219_2,10893,VPAALKVV True True VPAALKVV 58.832889 398.768115222454 98965696.0 10891.0 ENST00000468655.1_1_19:49994004-49994437:+|nuORF;;nc|ENSG00000293056|Q6NVV1|RPL13AP3;;ENSG00000142541|ENST00000391857|RPL13A 3.3239235083262124 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10894 58.834 48.0 1230400.0 25 0 119680.0 + 45643 YVPETVYRV 9 62 563.300550409963 1124.5865478867258 2 563.3008300662041 MULTI CID FTMS 0 0 0 10891 841950.25 0.7458343036063817 -1 0.0653533935546875 3 Unmodified _YVPETVYRV_ ENSG00000082701|ENST00000264235|GSK3B;ENSG00000105723|ENST00000222330|GSK3A;nc|ENSG00000082701|P49841-2|GSK3B 34.40172386719151 0.1061884637610825 4 [YV]PETVY[RV] 9 0 + 65.295 0.0 0.0 5.8061 5.8061 82.575 0.0 0.0 0.0 45.00463215022123 2.922152515121219 2.922152515121219 7.468961563093913 0 0.3807196863200844 2.0 0.805462187404089 0.0 + + [YV]PETVY[RV];[EP][{I|L}P]VTEPM{I|L};[NP][KP]VTEPM{I|L};[EP][{I|L}P]VT[HA][YV];[EP]T[HS][{I|L}V]VM{I|L};[YV]V[Y{I|L}]QPM{I|L};[YV]PQ[Y{I|L}]VM{I|L};[NP]D[QP][{I|L}V]VM{I|L};[TP]E[HS][{I|L}V]VM{I|L};YY[QP][{I|L}V]VM{I|L} 5.8061;5.142;3.2525;2.3248;2.2876;2.2066;1.9213;0.82232;0.77684;0.66683 +;-;-;-;-;-;-;-;-;- + 109 + 1 1.425 50200.1 1.0 6208 4684 10891 HBL1_DMSO_200M_050219_2,10894 HBL1_DMSO_200M_050219_2,10894,YVPETVYRV True True YVPETVYRV 58.834179 563.300830066204 24886808.0 10891.0 nc|ENSG00000082701|P49841-2|GSK3B;;ENSG00000082701|ENST00000264235|GSK3B;;ENSG00000105723|ENST00000222330|GSK3A 7.320001443227132 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10895 58.84 293.0 488130.0 25 0 70233.0 + -1 MLSETSMHSLY 11 99 657.7903335168909 1313.5661141005817 2 657.7907592654228 MULTI CID FTMS 0 0 0 10891 387893.28125 0.3426566876520653 -1 0.0653533935546875 4 Oxidation (M) _MLSETSM(Oxidation (M))HSLY_ REV__ENST00000515837.6_1_11:61166042-61166276:+|nuORF 22.736283301280096 0.5583477779825423 4 {[TV]|[{I|L}S]}MEESG{I|L} 8 -1 74.914 0.0 0.0 5.7031 0.0 0.0 0.0 464.16408074337886 464.16408074337886 64.0768917551006 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.8494850021680094 0.0 {[TV]|[{I|L}S]}MEESG{I|L} 5.7031 - 881 + 1 1.425 108564.2 1.0 6209 4684 10891 HBL1_DMSO_200M_050219_2,10895 HBL1_DMSO_200M_050219_2,10895,MLSETSMHSLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10896 58.844 213.0 694740.0 25 0 71392.0 + 39526 VAVGVIKAV 9 122 428.2867325923942 854.5589122515884 2 428.2867309451103 MULTI CID FTMS 0 0 0 10891 365871.25 1.0 0 0.0 5 Unmodified _VAVGVIKAV_ ENSG00000156508|ENST00000309268|EEF1A1;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;ENST00000436459.2_1_9:135895553-135896258:+|nuORF;ENST00000513637.1_1_5:43495177-43495438:-|nuORF;nc|ENSG00000196205|Q5VTE0|EEF1A1P5 42.09456458481378 0.0639583784996157 4 {[VA]|[{I|L}G]}VGV{I|L}KAV 9 0 + 53.188 0.0 0.0 6.224 6.224 80.177 0.0 0.0 0.0 20.762743881329506 3.979400086720375 3.979400086720375 3.979400086720375 0 1.066901560044258 1.5228787452803376 0.0 0.0 + + {[VA]|[{I|L}G]}VGV{I|L}KAV;{[VA]|[{I|L}G]}VGV{I|L}KG{I|L};{[VA]|[{I|L}G]}VGV{I|L}{I|L}[KG];[VG]VRR[R{I|L}] 6.224;5.7584;5.6122;0.84668 +;-;-;- + 654 + 1 1.425 118381.0 1.0 6210 4684 10891 HBL1_DMSO_200M_050219_2,10896 HBL1_DMSO_200M_050219_2,10896,VAVGVIKAV True True VAVGVIKAV 58.843617 428.28673094511 2833765.5 10891.0 ENST00000436459.2_1_9:135895553-135896258:+|nuORF;;ENST00000417549.1_1_13:28789725-28790031:+|nuORF;;ENSG00000156508|ENST00000309268|EEF1A1;;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;;ENST00000513637.1_1_5:43495177-43495438:-|nuORF 5.026270866394043 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10897 58.846 88.0 896260.0 25 0 83708.0 + 22665 IFIKDSNSL 9 102 518.2803633795372 1034.5461738258743 2 518.7845336794853 MULTI CID FTMS 0 0 0 10891 233135.265625 1.0 0 0.0 6 Unmodified _LPYSPKMSI_ ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1 18.13498045792455 0.3457906370836843 4 S{I|L} 2 7 13.232 0.0 0.0 1.279 0.0 0.0 816.4190051020447 0.0 816.4190051020447 0.0 2.774334638038452 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + S{I|L} 1.279 + + 64 + 1 1.425 65070.2 1.0 6211 4684 10891 HBL1_DMSO_200M_050219_2,10897 HBL1_DMSO_200M_050219_2,10897,LPYSPKMSI False False IFIKDSNSL 58.845577 518.784533679485 963832.375 10891.0 ENSG00000099995|ENST00000215793|SF3A1;;nc|ENSG00000099995|Q15459-2|SF3A1 -0.0008457402388254 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10898 58.85 229.0 294360.0 25 0 82533.0 + -1 LSMKSTLL 8 88 454.7612093147487 0 454.7635070681572 PEAK CID FTMS 0 0 0 10891 264240.65625 0.9329536142583656 -1 0.0653533935546875 7 Oxidation (M) _LSM(Oxidation (M))KSTLL_ REV__LTR8_dup2971|chr17:8380695-8381392:+|9.083968009677742|0.2447948664736123|5.21|48.0|21|3|sense 18.13498045792455 0.4501116112875982 4 {I|L} 1 -1 13.979 0.0 0.0 1.5404 0.0 0.0 663.3290612302803 128.0718935602172 791.4009547904975 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L} 1.5404 + + 68 + 1 1.425 55698.4 1.0 6212 4684 10891 HBL1_DMSO_200M_050219_2,10898 HBL1_DMSO_200M_050219_2,10898,LSMKSTLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10899 58.854 240.0 518040.0 25 0 81773.0 + -1 TVMEICTARMC 11 121 438.8623229278815 1313.5651393838446 3 438.8628112673759 MULTI CID FTMS 0 0 0 10891 249664.859375 0.2842855033270469 -1 0.0653533935546875 8 Carbamidomethyl (C) _TVMEIC(Carbamidomethyl (C))TARMC_ REV__ENST00000496688.1_1_9:123589031-123593637:-|nuORF 8.751783647060863 0.8338564498997137 4 {[TV]|[{I|L}S]}G[WH]GSEE 9 -1 47.826 0.0 0.0 3.641 0.0 0.0 0.0 328.1344956006479 328.1344956006479 25.20770388587725 0.0 0.0 0.0 0 0.2614393726401688 2.0 1.110924374808178 0.0 {[TV]|[{I|L}S]}G[WH]GSEE 3.641 - 644 1 1.425 105020.4 1.0 6213 4684 10891 HBL1_DMSO_200M_050219_2,10899 HBL1_DMSO_200M_050219_2,10899,TVMEICTARMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10900 58.859 251.0 389830.0 25 0 41824.0 + 25996 NLTALGLNL 9 132 464.7769029994221 927.5392530656444 2 464.7771789431572 MULTI CID FTMS 0 0 0 10891 194109.515625 0.086020309115069 -2 0.1930961608886718 9 Unmodified _NLTALGLNL_ ENSG00000138363|ENST00000236959|ATIC;ENST00000427397.5_1_2:216176945-216197107:+|nuORF;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;ENST00000488712.5_1_2:216176805-216189903:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC 34.40172386719151 0.1061884637610825 4 {[QV]|[N{I|L}]|[RA]|[KV]}SVVG[Q{I|L}]V 9 5 + 51.563 0.0 0.0 5.5592 5.5592 74.763 0.0 0.0 0.0 4.929155219028942 18.05848105229167 4.929155219028942 2.487737688117236 0 0.75 0.9208187539523752 0.3494850021680094 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}SVVG[Q{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}[TA]{I|L}G[Q{I|L}]V;[KG]DV{I|L}G[Q{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}VVSG[Q{I|L}]V;[AG]VSVVG[Q{I|L}]V;[{I|L}A]GTG{I|L}G[Q{I|L}]V;[AG]ATV{I|L}G[Q{I|L}]V;[{I|L}A]{[QS]|[NT]}{I|L}G[Q{I|L}]V;{[QG]|[NA]}[{I|L}T]{I|L}G[Q{I|L}]V;[QA]TV{I|L}G[Q{I|L}]V 5.5592;5.291;4.3752;4.3358;4.2248;4.147;4.1386;4.1041;4.0422;4.0223 -;-;-;-;-;-;-;-;-;- 1431 1 1.425 79662.1 1.0 6214 4684 10891 HBL1_DMSO_200M_050219_2,10900 HBL1_DMSO_200M_050219_2,10900,NLTALGLNL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10901 58.862 159.0 442050.0 25 0 26736.0 + 31491 RPYEPINSI 9 102 544.7899950633306 1087.565437193461 2 544.7899047732353 MULTI CID FTMS 0 0 0 10891 193094.390625 0.3761720713345048 -1 0.0653533935546875 10 Unmodified _RPYEPINSI_ ENSG00000115207|ENST00000264720|GTF3C2 47.594388314883695 0.0456443387682827 4 [NS]{I|L}[KC]P{I|L}NS{I|L} 10 5 + 70.157 0.0 0.0 6.4508 6.4508 75.088 0.0 0.0 0.0 0.7403126772771884 16.53212513775344 0.7403126772771884 0.7403126772771884 0 1.1307196863200843 0.7958800173440752 0.5484550065040281 0.0 [NS]{I|L}[KC]P{I|L}NS{I|L};{[TV]|[{I|L}S]}N[KC]P{I|L}NS{I|L};[EP][YR]P{I|L}NS{I|L};[NS]{I|L}[KC]P{I|L}GGS{I|L};{[TV]|[{I|L}S]}N[KC]P{I|L}GGS{I|L};{[TV]|[{I|L}S]}GG[KC]P{I|L}NS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[RE]|[WV]}P{I|L}NS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S[KC]P{I|L}NS{I|L};[EP][YR]P{I|L}GGS{I|L};[RP][YE]P{I|L}NS{I|L} 6.4508;6.3827;5.8242;5.6081;5.5401;5.5401;5.2122;5.1701;4.9775;4.6586 -;-;-;-;-;-;-;-;-;+ + 691 1 1.425 61096.8 1.0 6215 4684 10891 HBL1_DMSO_200M_050219_2,10901 HBL1_DMSO_200M_050219_2,10901,RPYEPINSI True True RPYEPINSI 58.862156 544.789904773235 4246055.5 10891.0 ENSG00000115207|ENST00000264720|GTF3C2 5.158095836639404 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10902 58.866 205.0 336940.0 25 0 35951.0 + 23313 LTAFGTRT 8 91 433.7385612904472 865.4625696476943 2 433.7390930056572 MULTI CID FTMS 0 0 0 10891 151853.03125 1.0 0 0.0 11 Unmodified _LTAFGTRT_ REV__ENST00000228872.8_1_12:12870397-12870556:+|nuORF 18.13498045792455 0.6430038125133779 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AKT{I|L}{[CP]|[EA]} 8 -1 + 24.58 0.0 0.0 2.8401 2.8401 71.082 0.0 0.0 0.0 3.671788782095806 -4.2443305977935175 -4.2443305977935175 6.273920196614725 0 0.7742275032520141 1.0 0.4247425010840047 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AKT{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}SKT{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}TKAC{I|L};{[MS]|[{M(Oxidation (M))|F}A]}SVRRM;{[MS]|[{M(Oxidation (M))|F}A]}SV[{I|L}A]KM;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}T[VG]KM;[PG]{I|L}{[HG]|PP}VS{[CP]|[EA]} 2.8401;2.1152;1.91;1.5851;1.4266;1.4266;1.2373 -;-;-;-;-;-;- 152 1 1.425 59069.5 1.0 6216 4684 10891 HBL1_DMSO_200M_050219_2,10902 HBL1_DMSO_200M_050219_2,10902,LTAFGTRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10903 58.881 800.0 183610.0 25 0 24600.0 -1 0 98 865.8991707412696 1729.783788549339 2 866.4006225466728 MULTI CID FTMS 0 0 0 10891 153974.40625 0.8601058727519496 2 -0.2671318054199219 12 4 PTPAT{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}[DP]{[QN]|[E{I|L}]|[KN]} 13 -1 37.044 0.0 0.0 2.1415 0.0 0.0 285.16902358222814 0.0 285.16902358222814 0.0 19.18694138887272 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.4247425010840047 PTPAT{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}[DP]{[QN]|[E{I|L}]|[KN]} 2.1415 - 1178 1 1.425 100309.1 0.6700000166893005 6217 4684 10891 HBL1_DMSO_200M_050219_2,10903 HBL1_DMSO_200M_050219_2,10903, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10904 58.895 800.0 255490.0 25 0 37330.0 -1 VNFCFHCYCFC 11 144 778.7826972150096 1555.5508414968192 2 778.7844726443291 MULTI CID FTMS 0 0 0 10891 142237.5625 0.112274567882719 -2 0.1930961608886718 13 3 Carbamidomethyl (C) _VNFCFHC(Carbamidomethyl (C))YC(Carbamidomethyl (C))FC(Carbamidomethyl (C))_ L1PA14_dup722|chr4:35336-35828:-|1.1683807787415716|0.0538723938996896|4.44|40.0|28|2|anti-sense 1.4819007175156935 0.86815623132643 4 YESGEMYT[NS] 10 -1 57.133 0.0 0.0 3.6728 0.0 0.0 376.0873652256328 0.0 376.0873652256328 0.0 29.21675067495749 0.0 0.0 0 0.0 0.0 2.004432191740108 0.0 YESGEMYT[NS] 3.6728 - 3612 1 1.425 143361.4 0.6899999976158142 6218 4684 10891 HBL1_DMSO_200M_050219_2,10904 HBL1_DMSO_200M_050219_2,10904,VNFCFHCYCFC False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 10905 58.903 443.0 404520.0 25 0 49780.0 + 26575 NVLPRTVSV 9 150 492.79571356597575 983.5768741987516 2 492.7956115603447 MULTI CID FTMS 0 0 0 10891 135146.65625 0.2362053390019356 -5 0.5236587524414062 14 Unmodified _NVLPRTVSV_ ENSG00000129810|ENST00000412997|SGO1;nc|ENSG00000129810|Q5FBB7|SGO1 53.832793166522166 0.0319663582346103 4 VN{I|L}P[RH]V 7 5 59.144 0.0 0.0 6.0131 0.0 0.0 0.0 165.0670565240844 165.0670565240844 43.30396563459394 0.0 0.0 0.0 0 1.032692070067256 2.0 0.0 0.4247425010840047 VN{I|L}P[RH]V 6.0131 - 919 + 1 1.425 137138.1 1.0 6219 4684 10891 HBL1_DMSO_200M_050219_2,10905 HBL1_DMSO_200M_050219_2,10905,NVLPRTVSV True True NVLPRTVSV 58.902791 492.795611560345 8677191.0 10891.0 ENSG00000129810|ENST00000412997|SGO1;;nc|ENSG00000129810|Q5FBB7|SGO1 4.571744362513225 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10906 58.918 800.0 147520.0 25 0 10539.0 + 23239 FISEFEHRV 9 138 581.7926248369458 1161.5706967406916 2 582.2969238162041 MULTI CID FTMS 0 0 0 10891 132318.640625 1.0 0 0.0 15 Unmodified _LSTLLCEQQQ_ ENST00000527047.5_1_11:237024-247462:+|nuORF;ENSG00000185627|ENST00000532097|PSMD13 10.073929032068715 0.6785112666868882 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SE{M(Oxidation (M))|F}EHRV 9 9 + 34.447 0.0 0.0 2.9655 2.9655 63.283 0.0 0.0 0.0 4.724344914218797 6.266281828186997 4.724344914218797 1.2160073128219366 0 0.0 0.0 0.3054621874040891 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}SE{M(Oxidation (M))|F}EHRV;{[TV]|[{I|L}S]}T[HT]{M(Oxidation (M))|F}ES[Q{I|L}];{[TV]|[{I|L}S]}HM{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[Q{I|L}];{[TV]|[{I|L}S]}E[{I|L}P]{M(Oxidation (M))|F}ES[Q{I|L}];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AE{M(Oxidation (M))|F}EHRV;{[TV]|[{I|L}S]}T[HT]{M(Oxidation (M))|F}EA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QG]|[NA]}PKE{M(Oxidation (M))|F}ES[Q{I|L}];{[TV]|[{I|L}S]}HM{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}E[{I|L}P]{M(Oxidation (M))|F}EA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}T[{I|L}P]{M(Oxidation (M))|F}ES[Q{I|L}] 2.9655;2.8608;2.5983;2.5774;2.1842;2.0796;1.8197;1.817;1.7962;1.7121 -;-;-;-;-;-;-;-;-;- 757 + 1 1.425 90983.2 0.7099999785423279 6220 4684 10891 HBL1_DMSO_200M_050219_2,10906 HBL1_DMSO_200M_050219_2,10906,LSTLLCEQQQ False False FISEFEHRV 58.917798 582.296923816204 3133456.8125 10891.0 ENST00000527047.5_1_11:237024-247462:+|nuORF;;ENSG00000185627|ENST00000532097|PSMD13 7.031009038289388 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10907 58.932 800.0 126740.0 25 0 11190.0 + + -1 KQTNFMTKL 9 157 555.3009970410491 1108.587441148898 2 555.8032104372978 MULTI CID FTMS 0 0 0 10891 107985.078125 1.0 0 0.0 16 Carbamidomethyl (C) _AKC(Carbamidomethyl (C))FSRKGR_ ENSG00000134684|ENST00000373477|YARS1;ENST00000487404.5_1_1:33241584-33248146:-|nuORF;ENST00000469100.5_1_1:33241584-33246798:-|nuORF;ENST00000490826.1_1_1:33241584-33245138:-|nuORF 11.640296217721598 0.521594087909532 4 NTM[SG]NTK{I|L} 9 -1 32.739 0.0 0.0 2.9532 0.0 0.0 144.1217561897168 0.0 144.1217561897168 0.0 21.06018225996194 0.0 0.0 0 0.0 0.0 1.0994850021680094 0.5078792628615163 NTM[SG]NTK{I|L} 2.9532 - 1173 + 1 1.425 80784.7 0.5600000023841858 6221 4684 10891 HBL1_DMSO_200M_050219_2,10907 HBL1_DMSO_200M_050219_2,10907,AKCFSRKGR False False KQTNFMTKL 58.931629 555.803210437298 780365.125 10891.0 ENSG00000134684|ENST00000373477|YARS1;;ENST00000487404.5_1_1:33241584-33248146:-|nuORF;;ENST00000469100.5_1_1:33241584-33246798:-|nuORF;;ENST00000490826.1_1_1:33241584-33245138:-|nuORF 3.047194480895996 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10908 58.945 800.0 258140.0 25 0 32266.0 + + 26227 YPIEIDPHRTV 11 123 670.8555228390702 1339.6964927449403 2 670.3535034060478 MULTI CID FTMS 0 0 0 10891 116271.609375 0.3104960195048726 -2 0.1930961608886718 17 Unmodified _NQIRPDRENKA_ ENST00000469698.5_1_17:39981777-39991902:-|nuORF;ENST00000393910.5_1_17:39983688-39992209:-|nuORF;ENSG00000141698|ENST00000435506|NT5C3B;nc|ENSG00000141698|Q969T7-2|NT5C3B 16.149105407346934 0.6992268271266642 4 [{I|L}P]E{I|L}[VG]D{I|L}E{I|L}P 11 -1 64.894 0.0 0.0 4.8439 0.0 0.0 0.0 161.0437807871348 161.0437807871348 18.14964468072182 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.3703715150305282 0.0 [{I|L}P]E{I|L}[VG]D{I|L}E{I|L}P 4.8439 - 1231 1 1.425 151925.1 0.5699999928474426 6222 4684 10891 HBL1_DMSO_200M_050219_2,10908 HBL1_DMSO_200M_050219_2,10908,NQIRPDRENKA False False YPIEIDPHRTV 58.945466 670.3551 10708237.0 10891.0 ENST00000469698.5_1_17:39981777-39991902:-|nuORF;;ENST00000393910.5_1_17:39983688-39992209:-|nuORF;;ENSG00000141698|ENST00000435506|NT5C3B;;nc|ENSG00000141698|Q969T7-2|NT5C3B 7.948938687642415 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10909 58.96 800.0 201440.0 25 0 11622.0 + 9835 FPEEEWRHV 9 139 614.7916893040708 1227.5688256749415 2 614.7913696169853 MULTI CID FTMS 0 0 0 10891 102506.2421875 0.7452377549898354 -4 0.4108428955078125 18 Unmodified _FPEEEWRHV_ ENSG00000197037|ENST00000394152|ZSCAN25;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 67.83816525789305 0.0219346420158844 4 {M(Oxidation (M))|F}PEEEWRHV 9 0 + 67.12 0.0 0.0 5.4677 5.4677 69.811 0.0 0.0 0.0 0.0326110099757386 0.0326110099757386 0.0326110099757386 0.0326110099757386 0 1.7104093769761874 0.0 0.3807196863200844 0.7059771852360797 + + {M(Oxidation (M))|F}PEEEWRHV;[EP]E[K{I|L}]EEEPE;[{I|L}A]GVQQEEEPE;[EP]EE[K{I|L}]EEPE;[Q{I|L}]VQQEEEPE;{I|L}{I|L}NQQEEEPE;{M(Oxidation (M))|F}PEEE{[DA]|[EG]}RHV;[{I|L}A]GQQVEEEPE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HC][K{I|L}]EEPE;[VG]A{I|L}QQEEEPE 5.4677;5.4651;5.3067;5.2198;4.9373;4.8083;4.7176;4.5711;4.5092;4.3668 +;-;-;-;-;-;-;-;-;- + 1893 + 1 1.425 119797.6 0.5699999928474426 6223 4684 10891 HBL1_DMSO_200M_050219_2,10909 HBL1_DMSO_200M_050219_2,10909,FPEEEWRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10910 58.965 222.0 350040.0 25 0 72602.0 + + 15361 GQSDVIRAL 9 106 479.74130080928336 0 479.7409240603447 PEAK CID FTMS 0 0 0 10891 102261.296875 0.79486931133531 5 -0.5693550109863281 19 Unmodified _IPNECRNL_ ENSG00000183831|ENST00000333279|ANKRD45;ENST00000367712.2_1_1:173628194-173628566:-|nuORF;nc|ENSG00000285777|Q5TZF3-1|ANKRD45 10.183394434864962 0.5394990767616434 4 ASDV 4 -1 9.0165 0.0 0.0 0.94171 0.0 0.0 113.98108175997876 468.2917574518188 582.2728392117975 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ASDV 0.94171 - 122 + 1 1.425 62336.3 1.0 6224 4684 10891 HBL1_DMSO_200M_050219_2,10910 HBL1_DMSO_200M_050219_2,10910,IPNECRNL False False GQSDVIRAL 58.964662 479.740924060345 0.0 10891.0 ENSG00000183831|ENST00000333279|ANKRD45;;ENST00000367712.2_1_1:173628194-173628566:-|nuORF;;nc|ENSG00000285777|Q5TZF3-1|ANKRD45 2.4325911899407706 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10911 58.979 800.0 278880.0 25 0 37596.0 + 22687 LQDGGLQV 8 124 829.4417915600435 828.4345150934435 1 829.4423705935478 MULTI CID FTMS 0 0 0 10891 98137.359375 0.3331376307838112 -1 0.0653533935546875 20 Unmodified _LQDGGLQV_ ENSG00000092621|ENST00000641023|PHGDH;ENST00000496756.1_1_1:120254528-120263945:+|nuORF 88.90359156742426 0.0528693370567628 4 [Q{I|L}]D{I|L}NQV 7 3 + 80.166 0.0 0.0 9.6768 9.6768 90.409 0.0 0.0 0.0 13.052503363700936 16.320232147054064 13.052503363700936 6.460828060918828 0 1.2302046884880935 1.0457574905606752 0.9802046884880936 0.9857737871658818 [Q{I|L}]D{I|L}NQV;[Q{I|L}]DVQQV;[Q{I|L}]D{I|L}GGQV;[Q{I|L}]D{I|L}N[AG]V;[Q{I|L}]DN{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}NQV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}NQV;[Q{I|L}]DV[AG]QV;[Q{I|L}]DVQ[AG]V;[AG]{I|L}D{I|L}NQV 9.6768;8.897;8.5506;8.5506;8.4458;8.1013;8.0535;7.7707;7.7707;7.5871 -;-;-;-;-;-;-;-;-;- 4036 1 1.425 154592.0 0.5699999928474426 6225 4684 10891 HBL1_DMSO_200M_050219_2,10911 HBL1_DMSO_200M_050219_2,10911,LQDGGLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10913 58.983 24.0 1636600.0 25 0 297460.0 -1 IPMSSKRAL 9 87 509.7878803784988 1017.5612078237976 2 510.2792236208916 MULTI CID FTMS 0 0 0 10912 978854.5 0.322256917269637 -3 0.3561859130859375 1 Oxidation (M) _IPM(Oxidation (M))SSKRAL_ ENST00000444117.5_1_11:47291305-47291413:+|nuORF 36.12702656103203 0.0967173616627612 4 A{I|L} 2 -1 25.261 0.0 0.0 2.4825 0.0 0.0 815.4290799935227 0.0 815.4290799935227 0.0 19.77629699328141 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 A{I|L} 2.4825 + + 33 + 1 1.441 35265.8 1.0 6226 4685 10912 HBL1_DMSO_200M_050219_2,10913 HBL1_DMSO_200M_050219_2,10913,IPMSSKRAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10914 58.986 115.0 1011900.0 25 0 142140.0 + 44669 YPFKPPKV 8 93 325.86056900573425 974.5598776174028 3 325.8600341677666 MULTI CID FTMS 0 0 0 10912 492465.75 0.0076319175319925 10 -1.059894561767578 2 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 28.486842064014134 0.4448922141344407 4 YP{M(Oxidation (M))|F}KPPKV 8 0 + 51.298 0.0 0.0 5.2637 5.2637 87.359 0.0 0.0 0.0 23.67676984150563 8.228111370850996 8.228111370850996 34.53678169852762 0 0.2742275032520141 0.9208187539523752 0.0 0.2215141619232908 + + YP{M(Oxidation (M))|F}KPPKV;[KP][{I|L}T]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[HG]|PP}KK[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.2637;1.7199;1.3103;0.19334 +;-;-;- + 159 + 1 1.441 95861.8 1.0 6227 4685 10912 HBL1_DMSO_200M_050219_2,10914 HBL1_DMSO_200M_050219_2,10914,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10915 58.987 43.0 1086600.0 25 0 140430.0 + 3869 DAKSTIVSI 9 74 467.2663673279935 932.5181817227872 2 467.2662536501884 MULTI CID FTMS 0 0 0 10912 1111833.75 0.4424696923132178 -1 0.1630897521972656 3 Unmodified _DAKSTIVSI_ ENSG00000166479|ENST00000299608|TMX3;ENST00000578816.1_1_18:66344172-66346774:-|nuORF 34.40172386719151 0.1061884637610825 4 {[TV]|[{I|L}S]}N{[MG]|[TS]}{I|L}V{[TV]|[{I|L}S]} 9 3 + 49.146 0.0 0.0 5.2702 5.2702 76.799 0.0 0.0 0.0 15.96664959441256 25.953162014695792 15.96664959441256 4.273174902439578 0 0.5 1.5228787452803376 1.055462187404089 0.0 {[TV]|[{I|L}S]}N{[MG]|[TS]}{I|L}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}T[NS]{I|L}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}GG{[MG]|[TS]}{I|L}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}NV{I|L}{[MG]|[TS]}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}NVS[{I|L}T]{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}V[C(Carbamidomethyl (C))R]V{[TV]|[{I|L}S]};[VS]Q{[MG]|[TS]}{I|L}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}VNS[{I|L}T]{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}VN{I|L}{[MG]|[TS]}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}GGV{I|L}{[MG]|[TS]}{[TV]|[{I|L}S]} 5.2702;4.812;4.2828;3.7376;3.7376;3.7103;3.3992;3.2;3.2;2.7502 -;-;-;-;-;-;-;-;-;- 566 1 1.441 45092.0 1.0 6228 4685 10912 HBL1_DMSO_200M_050219_2,10915 HBL1_DMSO_200M_050219_2,10915,DAKSTIVSI True True DAKSTIVSI 58.986793 467.266253650188 40441748.0 10912.0 ENSG00000166479|ENST00000299608|TMX3;;ENST00000578816.1_1_18:66344172-66346774:-|nuORF 4.056154330571492 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10916 58.988 40.0 1058000.0 25 0 127040.0 + 17763 KQFEGTVEI 9 59 525.7769697331903 1049.5393865331805 2 525.7771484255791 MULTI CID FTMS 0 0 0 10912 1082039.375 0.4014633120593966 -2 0.2284431457519531 4 Unmodified _KQFEGTVEI_ ENSG00000139618|ENST00000380152|BRCA2 32.78568957990786 0.1150597335874693 4 {[QD]|[EN]|[WG]|[KD]|[RS]}Q{[MS]|[{M(Oxidation (M))|F}A]}TVE{I|L} 9 3 + 50.889 0.0 0.0 4.8487 4.8487 80.835 0.0 0.0 0.0 2.956349637772746 43.89969987625378 2.956349637772746 9.208187539523747 0 0.75 0.0 0.8494850021680094 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}Q{[MS]|[{M(Oxidation (M))|F}A]}TVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{[MS]|[{M(Oxidation (M))|F}A]}TVE{I|L};[{M(Oxidation (M))|F}E]{[SA]|[TG]}[KQ]VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}[KQ]{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KQ]{M(Oxidation (M))|F}{I|L} 4.8487;3.9714;2.9867;2.0638;1.9539 -;-;-;-;- 71 1 1.441 45301.3 1.0 6229 4685 10912 HBL1_DMSO_200M_050219_2,10916 HBL1_DMSO_200M_050219_2,10916,KQFEGTVEI True True KQFEGTVEI 58.987972 525.777148425579 21587708.0 10912.0 ENSG00000139618|ENST00000380152|BRCA2 1.4820782989263537 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10917 58.99 66.0 1218500.0 25 0 124730.0 + 25011 MPQHIKITV 9 95 356.207409616243 1065.600399448929 3 356.2072021365166 MULTI CID FTMS 0 0 0 10912 904139.125 1.0 0 0.0 5 Unmodified _MPQHIKITV_ ENSG00000078747|ENST00000374864|ITCH;ENST00000483727.5_1_20:33033173-33065666:+|nuORF;nc|ENSG00000289720|Q96J02-3|ITCH;nc|ENSG00000289720|Q96J02|ITCH 14.95716135407024 0.4318104563536712 4 M[QP]H{I|L}[K{I|L}]TV 9 0 + 40.965 0.0 0.0 3.8443 3.8443 78.838 0.0 0.0 0.0 -18.59820670403301 12.587418566968154 -18.59820670403301 11.359921914233905 0 0.3054621874040891 0.0 0.3807196863200844 0.0 + + M[QP]H{I|L}[K{I|L}]TV;[{M(Oxidation (M))|F}T]T{I|L}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TV;[{M(Oxidation (M))|F}T]T[SG]{I|L}[K{I|L}]TV;[{M(Oxidation (M))|F}T]T{I|L}[SG][K{I|L}]TV;[{M(Oxidation (M))|F}T]T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[K{I|L}]TV 3.8443;2.7782;2.6443;2.3618;2.0313 +;-;-;-;- + 127 + 1 1.441 75628.6 1.0 6230 4685 10912 HBL1_DMSO_200M_050219_2,10917 HBL1_DMSO_200M_050219_2,10917,MPQHIKITV False True MPQHIKITV 58.989547 356.207202136517 6503927.0 10912.0 ENST00000483727.5_1_20:33033173-33065666:+|nuORF;;nc|ENSG00000289720|Q96J02-3|ITCH;;ENSG00000078747|ENST00000374864|ITCH;;nc|ENSG00000289720|Q96J02|ITCH 3.9313906033833823 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10918 58.999 540.0 446460.0 25 0 103560.0 -1 0 73 1123.4609839871978 3367.3611225617933 3 1124.129687488079 MULTI CID FTMS 0 0 0 10912 673714.25 0.1103907770513947 -3 0.3561859130859375 6 4 GY[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}G 6 -1 12.396 0.0 0.0 0.36812 0.0 0.0 1254.4357818408937 1362.6434440792818 2617.079225920176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GY[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}G 0.36812 - 79 + 1 1.441 201169.2 1.0 6231 4685 10912 HBL1_DMSO_200M_050219_2,10918 HBL1_DMSO_200M_050219_2,10918, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10919 59.001 102.0 745040.0 25 0 131850.0 + 9832 FPEEEWRHV 9 84 410.1964458952241 1227.5675082858722 3 410.1965515017509 MULTI CID FTMS 0 0 0 10912 416102.71875 0.8603675806526337 -3 0.3561859130859375 7 Unmodified _FPEEEWRHV_ ENSG00000197037|ENST00000394152|ZSCAN25;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 39.94969957227396 0.0757326808254658 4 [EP]EE[K{I|L}]EEP 9 6 53.166 0.0 0.0 4.331 0.0 0.0 0.0 144.04721623324727 144.04721623324727 38.460696996448576 0.0 0.0 0.0 0 0.0 2.0 0.7302046884880937 0.0 [EP]EE[K{I|L}]EEP 4.331 - 416 1 1.441 65632.1 1.0 6232 4685 10912 HBL1_DMSO_200M_050219_2,10919 HBL1_DMSO_200M_050219_2,10919,FPEEEWRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10920 59.003 96.0 527920.0 25 0 26749.0 + 26508 NVELDPEIQ 9 96 528.7654518527686 1055.516350772337 2 529.2679931521416 MULTI CID FTMS 0 0 0 10912 383476.0 0.7863405029023752 -2 0.2284431457519531 8 Unmodified _NVELDPEIQ_ CON__Q32MB2;CON__Q3SY84;CON__Q6IME9;CON__Q6NXH9;CON__Q7RTS7;CON__Q9R0H5;ENSG00000139648|ENST00000267119|KRT71;ENSG00000170484|ENST00000305620|KRT74;ENSG00000186049|ENST00000305748|KRT73;nc|ENSG00000186049|Q86Y46-2|KRT73 20.453626601364224 0.2830276176381075 4 {I|L}Q 2 7 23.46 0.0 0.0 2.2227 0.0 0.0 796.363196330734 0.0 796.363196330734 0.0 8.317663064622597 0.0 0.0 0 0.0 0.0 0.0 0.6382104921644451 + {I|L}Q 2.2227 + + 211 + 1 1.441 44133.2 1.0 6233 4685 10912 HBL1_DMSO_200M_050219_2,10920 HBL1_DMSO_200M_050219_2,10920,NVELDPEIQ False True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 10921 59.006 123.0 407480.0 25 0 54372.0 + 17737 KPYAHILSV 9 87 514.3004798079252 1026.5864066826502 2 514.3004638552666 MULTI CID FTMS 0 0 0 10912 270385.3125 0.8676205181418226 1 -0.1040420532226562 9 Unmodified _KPYAHILSV_ ENSG00000158161|ENST00000373871|EYA3;ENST00000471498.5_1_1:28324859-28384546:-|nuORF;nc|ENSG00000158161|Q99504-3|EYA3;nc|ENSG00000158161|Q99504-4|EYA3;nc|ENSG00000158161|Q99504-5|EYA3 25.399314129420983 0.2080152500878129 4 {[TV]|[{I|L}S]}[HM]K{I|L}{I|L}SV 9 5 + 60.821 0.0 0.0 5.9246 5.9246 84.158 0.0 0.0 0.0 7.727562184969372 42.91621682519379 7.727562184969372 9.018637558036673 0 0.7215141619232908 1.0 0.0 0.7742275032520141 {[TV]|[{I|L}S]}[HM]K{I|L}{I|L}SV;{[TV]|[{I|L}S]}[HM]{I|L}K{I|L}SV;{[TV]|[{I|L}S]}A{[QN]|[E{I|L}]|[KN]}[VP]{I|L}SV;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}K[YT]SV;{[TV]|[{I|L}S]}[HM]{I|L}{I|L}KSV;[PS]{[{M(Oxidation (M))|F}H]|[RQ]}K{I|L}{I|L}SV;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}KP[HC]{I|L};{[CT]|[{M(Oxidation (M))|F}G]}{I|L}K{I|L}[YT]SV;[PS]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}K{I|L}SV;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}K{I|L}P[HC]{I|L} 5.9246;5.0461;4.3206;4.2597;4.2409;4.2293;3.5618;3.3812;3.3508;2.6833 -;-;-;-;-;-;-;-;-;- 234 1 1.441 46608.1 1.0 6234 4685 10912 HBL1_DMSO_200M_050219_2,10921 HBL1_DMSO_200M_050219_2,10921,KPYAHILSV False True KPYAHILSV 59.005903 514.300463855267 3040115.0 10912.0 ENSG00000158161|ENST00000373871|EYA3;;nc|ENSG00000158161|Q99504-5|EYA3;;ENST00000471498.5_1_1:28324859-28384546:-|nuORF;;nc|ENSG00000158161|Q99504-3|EYA3;;nc|ENSG00000158161|Q99504-4|EYA3 3.9887001514434814 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10922 59.009 186.0 407580.0 25 0 74753.0 + 40150 VGLWMKNI 8 81 480.7720902437823 959.5296275543648 2 480.7726318240166 MULTI CID FTMS 0 0 0 10912 236055.65625 1.0 0 0.0 10 Unmodified _VGLWMKNI_ REV__ENSG00000169180|ENST00000304658|XPO6;REV__ENST00000557256.2_1_14:21191020-21191104:-|nuORF;REV__nc|ENSG00000169180|Q96QU8-2|XPO6 14.581692164780916 0.6954967302934248 4 {I|L}RS 3 -1 28.06 0.0 0.0 2.9243 0.0 0.0 0.0 600.2869967096311 600.2869967096311 15.585456211725202 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}RS 2.9243 - 59 + 1 1.441 64181.1 1.0 6235 4685 10912 HBL1_DMSO_200M_050219_2,10922 HBL1_DMSO_200M_050219_2,10922,VGLWMKNI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10923 59.014 217.0 267770.0 25 0 30215.0 + 42633 VTVDGEPVK 9 94 472.2582776403417 942.5020023474834 2 472.2588683962822 MULTI CID FTMS 0 0 0 10912 214402.03125 1.0 0 0.0 11 Unmodified _VTVDGEPVK_ REV__ENSG00000113327|ENST00000639213|GABRG2;REV__nc|ENSG00000113327|P18507-1|GABRG2;REV__nc|ENSG00000113327|P18507-3|GABRG2 19.256988751693697 0.3154191944385105 4 S{I|L} 2 -1 17.449 0.0 0.0 1.8513 0.0 0.0 724.3753524224819 0.0 724.3753524224819 0.0 2.578474942632594 0.0 0.0 0 0.0 0.0 0.25 0.0 S{I|L} 1.8513 - 180 + 1 1.441 48943.6 1.0 6236 4685 10912 HBL1_DMSO_200M_050219_2,10923 HBL1_DMSO_200M_050219_2,10923,VTVDGEPVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10924 59.022 462.0 210170.0 25 0 14381.0 + -1 FVDCCIRSF 9 120 573.7573410312466 1145.500129129293 2 573.7578613162041 MULTI CID FTMS 0 0 0 10912 165125.3125 1.0 0 0.0 12 Carbamidomethyl (C) _FVDC(Carbamidomethyl (C))CIRSF_ REV__ENSG00000151577|ENST00000383673|DRD3;REV__nc|ENSG00000151577|P35462-3|DRD3 11.640296217721598 0.521594087909532 4 V{M(Oxidation (M))|F}VDY 5 -1 47.735 0.0 0.0 4.1671 0.0 0.0 0.0 519.1753023736936 519.1753023736936 18.04953742795611 0.0 0.0 0.0 0 0.4247425010840047 0.8538719643217619 0.0 0.0 V{M(Oxidation (M))|F}VDY 4.1671 - 451 + 1 1.441 78795.6 1.0 6237 4685 10912 HBL1_DMSO_200M_050219_2,10924 HBL1_DMSO_200M_050219_2,10924,FVDCCIRSF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10925 59.026 231.0 408860.0 25 0 142880.0 -1 0 103 459.25551763217663 458.24824116557664 1 459.2567626833916 MULTI CID FTMS 0 0 0 10912 163387.171875 0.7653260942118255 -6 0.6867485046386719 13 4 V 1 -1 12.474 0.0 0.0 2.7222 0.0 0.0 341.16885533969617 0.0 341.16885533969617 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.7222 - 36 + 1 1.441 80183.3 1.0 6238 4685 10912 HBL1_DMSO_200M_050219_2,10925 HBL1_DMSO_200M_050219_2,10925, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10926 59.032 353.0 252220.0 25 0 19382.0 + 34697 SPTKLPSI 8 122 421.7515456767997 841.4885384203993 2 421.7523376345634 MULTI CID FTMS 0 0 0 10912 148096.015625 0.6112477802461773 15 -1.4973297119140625 14 Unmodified _SPTKLPSI_ ENSG00000104320|ENST00000265433|NBN 39.957323273325 0.2350051964751539 4 {I|L}PS{I|L} 4 4 20.996 0.0 0.0 2.4951 0.0 0.0 413.2259174260618 0.0 413.2259174260618 0.0 7.501269365254011 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 + {I|L}PS{I|L} 2.4951 + + 100 + 1 1.441 72805.3 1.0 6239 4685 10912 HBL1_DMSO_200M_050219_2,10926 HBL1_DMSO_200M_050219_2,10926,SPTKLPSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10927 59.046 800.0 80412.0 25 0 19656.0 -1 0 43 1128.7921587481817 3383.3546468447453 3 1129.462329089642 MULTI CID FTMS 0 0 0 10912 127371.9765625 0.8147050252062845 -1 0.1630897521972656 15 4 YA[HD]G{M(Oxidation (M))|F} 6 -1 18.416 0.0 0.0 0.54432 0.0 0.0 1473.5252533894702 1216.5869823007629 2690.1122356902333 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YA[HD]G{M(Oxidation (M))|F} 0.54432 - 41 + 1 1.441 62505.5 0.5199999809265137 6240 4685 10912 HBL1_DMSO_200M_050219_2,10927 HBL1_DMSO_200M_050219_2,10927, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10928 59.061 800.0 105440.0 25 0 7802.5 + -1 TVMEICTARMC 11 136 665.7873761057871 1329.560199278374 2 665.7867309451103 MULTI CID FTMS 0 0 0 10912 111331.6328125 1.0 0 0.0 16 Carbamidomethyl (C),Oxidation (M) _TVM(Oxidation (M))EICTARMC(Carbamidomethyl (C))_ REV__ENST00000496688.1_1_9:123589031-123593637:-|nuORF 26.020703789607367 0.4812285719068541 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}EES{I|L}G{M(Oxidation (M))|F} 9 -1 68.822 0.0 0.0 5.1763 0.0 0.0 0.0 317.09992395572505 317.09992395572505 58.3379001364149 0.0 0.0 0.0 0 1.110924374808178 2.0 0.0 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}EES{I|L}G{M(Oxidation (M))|F} 5.1763 - 447 + 1 1.441 68122.6 0.6800000071525574 6241 4685 10912 HBL1_DMSO_200M_050219_2,10928 HBL1_DMSO_200M_050219_2,10928,TVMEICTARMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10929 59.069 412.0 200780.0 25 0 13715.0 + -1 TVDYFCSITV 10 115 602.7807226565395 1203.546892379879 2 602.7811157107353 MULTI CID FTMS 0 0 0 10912 112873.6484375 1.0 0 0.0 17 Carbamidomethyl (C) _TVDYFC(Carbamidomethyl (C))SITV_ REV__ENST00000451621.2_1_14:106743549-106744185:-|nuORF 10.073929032068715 0.6785112666868882 4 {I|L}{I|L}A[C(Carbamidomethyl (C))C]EATN{I|L}P 11 -1 + 42.101 0.0 0.0 3.4981 3.4981 47.178 0.0 0.0 0.0 5.132965752203226 0.7222920559330603 0.7222920559330603 0.0 0 0.5682503180159344 1.5228787452803376 0.0 0.0 {I|L}{I|L}A[C(Carbamidomethyl (C))C]EATN{I|L}P;{I|L}{I|L}A[C(Carbamidomethyl (C))C]ETAN{I|L}P;[QP]A{M(Oxidation (M))|F}A{[CP]|[EA]}{M(Oxidation (M))|F}N{I|L}P;{I|L}{I|L}A[C(Carbamidomethyl (C))C]AETN{I|L}P;[QP]A{M(Oxidation (M))|F}A{[CP]|[EA]}{M(Oxidation (M))|F}NP{I|L};[QP]A{M(Oxidation (M))|F}E[HC]Y{I|L}P;{I|L}{I|L}A[C(Carbamidomethyl (C))C]ETAGG{I|L}P;{I|L}{I|L}A[C(Carbamidomethyl (C))C]EATGG{I|L}P;{I|L}{I|L}A[C(Carbamidomethyl (C))C]ETAV[QP];{I|L}{I|L}A[C(Carbamidomethyl (C))C]EATV[QP] 3.4981;3.4981;3.0716;2.9979;2.8496;2.7579;2.7396;2.7396;2.6953;2.6953 -;-;-;-;-;-;-;-;-;- 1113 1 1.441 62845.9 1.0 6242 4685 10912 HBL1_DMSO_200M_050219_2,10929 HBL1_DMSO_200M_050219_2,10929,TVDYFCSITV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10930 59.083 800.0 139420.0 25 0 22226.0 + -1 YVADQMHIWFR 11 99 741.3551693237689 1480.6957857143375 2 741.3528320193291 MULTI CID FTMS 0 0 0 10912 85069.2109375 0.7146205420134591 -2 0.2284431457519531 18 Oxidation (M) _YVADQM(Oxidation (M))HIWFR_ REV__ENSG00000049656|ENST00000320895|CLPTM1L;REV__nc|ENSG00000049656|Q96KA5-2|CLPTM1L 3.2813086475875832 0.8596665074481906 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VPVSGTQ 9 -1 20.249 0.0 0.0 1.3675 0.0 0.0 0.0 550.2268885798252 550.2268885798252 7.8976719887757 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VPVSGTQ 1.3675 - 576 1 1.441 86005.3 0.5699999928474426 6243 4685 10912 HBL1_DMSO_200M_050219_2,10930 HBL1_DMSO_200M_050219_2,10930,YVADQMHIWFR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10932 59.087 15.0 3585700.0 25 0 307020.0 + 22118 LPPPVQTQI 9 96 496.7926827535134 991.5708125738269 2 496.7927734255791 MULTI CID FTMS 0 0 0 10931 3734689.75 0.9353950844724416 4 -0.4379005432128906 1 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 48.345845343767074 0.0439967357579942 4 [{I|L}P]NPP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]} 9 5 + 49.458 0.0 0.0 4.9878 4.9878 69.487 0.0 0.0 0.0 16.938200260161118 4.762036441594191 4.762036441594191 0.9691001300805624 0 0.7396518287104438 2.0 0.0 0.0 [{I|L}P]NPP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPVQD{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PNP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPN{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]GGPP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PGGP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPV[AG]D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPGG{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[VP]PP{I|L}QD{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV]Q{I|L} 4.9878;4.8901;4.8901;4.5865;4.0592;3.9615;3.9615;3.6579;3.2796;3.1441 -;-;-;-;-;-;-;-;-;- 899 1 1.451 45588.0 1.0 6244 4686 10931 HBL1_DMSO_200M_050219_2,10932 HBL1_DMSO_200M_050219_2,10932,LPPPVQTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10933 59.088 45.0 1398700.0 25 0 244730.0 + 21309 LPEPSIRSV 9 66 499.2875991042045 996.560645275209 2 499.2876159548759 MULTI CID FTMS 0 0 0 10931 1159195.625 0.5034948219149641 3 -0.3022232055664062 2 Unmodified _LPEPSIRSV_ ENSG00000100077|ENST00000324198|GRK3;ENSG00000173020|ENST00000308595|GRK2 22.65808497894818 0.2428932432760099 4 {I|L}PEPS{I|L} 6 3 59.418 0.0 0.0 5.9623 0.0 0.0 0.0 357.1893404596313 357.1893404596313 49.03893124495578 0.0 0.0 0.0 0 0.8807196863200843 1.3979400086720375 0.0 0.0 + {I|L}PEPS{I|L} 5.9623 + + 54 + 1 1.451 53671.4 1.0 6245 4686 10931 HBL1_DMSO_200M_050219_2,10933 HBL1_DMSO_200M_050219_2,10933,LPEPSIRSV False True LPEPSIRSV 59.088475 499.287615954876 76101546.0 10931.0 ENSG00000100077|ENST00000324198|GRK3;;ENSG00000173020|ENST00000308595|GRK2 5.410646756490071 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10934 59.09 58.0 1072600.0 25 0 64030.0 + 44995 YPSLPAQQV 9 102 501.766141568671 1001.517730204142 2 501.7664977908134 MULTI CID FTMS 0 0 0 10931 786978.9375 0.9957461396209152 1 -0.1021881103515625 3 Unmodified _YPSLPAQQV_ ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF 85.35673624503755 0.0162188719545379 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}PAQQV 9 0 + 57.329 0.0 0.0 5.7242 5.7242 80.382 0.0 0.0 0.0 5.738413546066603 8.602712466649969 5.738413546066603 5.738413546066603 0 0.5484550065040281 1.0457574905606752 1.9916440611282624 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}PAQQV;[AG]VSQVSQQV;[AG]VS[TA]AAQQV;[PS]Y{I|L}PAQQV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}PAQQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}PA[AG]QV;[PS]{I|L}YPAQQV;{[TV]|[{I|L}S]}PYPAQQV;[AG]VS[AG]VSQQV;[AG]VSQVS[AG]QV 5.7242;5.1512;4.8691;4.8601;4.8154;4.8048;4.6588;4.6141;4.2362;4.2362 +;-;-;-;-;-;-;-;-;- + 820 1 1.451 54168.9 1.0 6246 4686 10931 HBL1_DMSO_200M_050219_2,10934 HBL1_DMSO_200M_050219_2,10934,YPSLPAQQV True True YPSLPAQQV 59.089923 501.766497790813 30620544.0 10931.0 ENSG00000137265|ENST00000380956|IRF4;;ENST00000495137.5_1_6:394829-397293:+|nuORF 4.205743074417114 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10935 59.092 90.0 857130.0 25 0 107160.0 + 21801 LPNHRVLIM 9 85 364.883451039952 1091.628523720056 3 364.8831970095634 MULTI CID FTMS 0 0 0 10931 613680.5625 0.8249683670331553 -1 0.1040420532226562 4 Unmodified _LPNHRVLIM_ ENSG00000114779|ENST00000361143|ABHD14B;ENST00000461108.5_1_3:52003444-52003858:-|nuORF;ENST00000487005.1_1_3:52003444-52008077:-|nuORF;nc|ENSG00000114779|Q96IU4-2|ABHD14B 23.1484247019978 0.2366544122328345 4 [YV]{I|L}V{I|L}{[QN]|[E{I|L}]|[KN]}{I|L}M 9 6 + 32.469 0.0 0.0 2.9744 2.9744 67.198 0.0 0.0 0.0 15.479553813795526 5.641836341787279 5.641836341787279 3.010299956639816 0 0.0 0.0 0.0 0.3807196863200844 [YV]{I|L}V{I|L}{[QN]|[E{I|L}]|[KN]}{I|L}M;[YV]{I|L}{I|L}V{[QN]|[E{I|L}]|[KN]}{I|L}M;[YV]{I|L}V{I|L}{[QN]|[E{I|L}]|[KN]}M{I|L};[YV]{[QN]|[E{I|L}]|[KN]}{I|L}V{I|L}{I|L}M;[YV]{I|L}{I|L}V{[QN]|[E{I|L}]|[KN]}M{I|L};[YV]{[QN]|[E{I|L}]|[KN]}V{I|L}{I|L}{I|L}M 2.9744;2.6986;1.897;1.893;1.6213;1.6172 -;-;-;-;-;- 179 + 1 1.451 69099.8 1.0 6247 4686 10931 HBL1_DMSO_200M_050219_2,10935 HBL1_DMSO_200M_050219_2,10935,LPNHRVLIM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10936 59.094 70.0 1009800.0 25 0 165090.0 41729 VPSVLGTPL 9 81 441.7683182352048 881.5220835372097 2 441.7686035037041 MULTI CID FTMS 0 0 0 10931 485821.09375 0.5451051642348332 -18 1.6985588073730469 5 Unmodified _VPSVLGTPL_ ENSG00000136274|ENST00000490531|NACAD 16.942295170755138 0.3780752226737986 4 VP 2 7 41.766 0.0 0.0 4.7379 0.0 0.0 0.0 682.3774726053175 682.3774726053175 15.568109453757655 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + VP 4.7379 + + 137 + 1 1.451 58556.0 1.0 6248 4686 10931 HBL1_DMSO_200M_050219_2,10936 HBL1_DMSO_200M_050219_2,10936,VPSVLGTPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10937 59.096 142.0 365360.0 25 0 46196.0 + 10249 FQSDTNAML 9 99 513.731272471612 1025.447992010024 2 513.7319824099541 MULTI CID FTMS 0 0 0 10931 330252.21875 1.0 0 0.0 6 Unmodified _FQSDTNAML_ ENSG00000127337|ENST00000247843|YEATS4 53.832793166522166 0.0319663582346103 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SDTNAM{I|L} 9 0 + 49.109 0.0 0.0 4.789 4.789 77.687 0.0 0.0 0.0 6.805234507957891 6.805234507957891 6.805234507957891 6.805234507957891 0 0.7742275032520141 0.0 0.75 1.0044321917401078 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SDTNAM{I|L};[YV]ANTD{[QC]|[C(Carbamidomethyl (C))A]}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}DTNAM{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SDTGGAM{I|L};{[SA]|[TG]}G{M(Oxidation (M))|F}DTNAM{I|L};[YV]ANTD[MN]V;[YV]AGGTD{[QC]|[C(Carbamidomethyl (C))A]}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}DTGGAM{I|L};{[QS]|[NT]}A[YE]NAM{I|L};{[SA]|[TG]}Q[YE]NAM{I|L} 4.789;4.1254;4.0863;3.8911;3.7928;3.2816;3.2274;3.1884;2.8449;2.6861 +;-;-;-;-;-;-;-;-;- + 444 1 1.451 44874.2 1.0 6249 4686 10931 HBL1_DMSO_200M_050219_2,10937 HBL1_DMSO_200M_050219_2,10937,FQSDTNAML True True FQSDTNAML 59.096415 513.731982409954 3157283.75 10931.0 ENSG00000127337|ENST00000247843|YEATS4 5.928024133046468 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10938 59.101 240.0 428290.0 25 0 32397.0 1985 ANPEDCVAF 9 129 483.20656199592935 964.3985710586588 2 483.2071105837822 MULTI CID FTMS 0 0 0 10931 273794.875 0.108618760453462 5 -0.5534706115722656 7 Unmodified _ANPEDCVAF_ ENSG00000008394|ENST00000396210|MGST1;ENST00000538857.1_1_12:16507186-16536519:+|nuORF;ENST00000539036.5_1_12:16500588-16536519:+|nuORF;ENST00000539708.5_1_12:16507186-16513330:+|nuORF;nc|ENSG00000008394|P10620-2|MGST1 19.256988751693697 0.3154191944385105 4 {[QG]|[NA]}P 3 6 29.437 0.0 0.0 3.0524 0.0 0.0 0.0 679.2425096175056 679.2425096175056 0.7471220215373364 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[QG]|[NA]}P 3.0524 + + 232 1 1.451 80071.3 1.0 6250 4686 10931 HBL1_DMSO_200M_050219_2,10938 HBL1_DMSO_200M_050219_2,10938,ANPEDCVAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10939 59.104 182.0 419410.0 25 0 28333.0 + 44680 YPFKPPKV 8 110 488.2868778785377 974.5592028238756 2 488.2867309451103 MULTI CID FTMS 0 0 0 10931 238866.71875 0.0078555198141905 11 -1.1311149597167969 8 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 23.1484247019978 0.5573009939494978 4 YP{M(Oxidation (M))|F}KP 5 3 56.058 0.0 0.0 5.7521 0.0 0.0 0.0 339.2033785455688 339.2033785455688 39.01931142141325 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + YP{M(Oxidation (M))|F}KP 5.7521 + + 216 + 1 1.451 61461.9 1.0 6251 4686 10931 HBL1_DMSO_200M_050219_2,10939 HBL1_DMSO_200M_050219_2,10939,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10940 59.118 800.0 122710.0 25 0 29165.0 -1 0 53 1118.7732796209357 3353.2980094630066 3 1119.107836902142 MULTI CID FTMS 0 0 0 10931 229394.9375 0.5123271316661908 2 -0.2202835083007812 9 4 T{I|L}TT 4 -1 22.656 0.0 0.0 0.67564 0.0 0.0 2267.800634312592 666.2533663385374 2934.0540006511296 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2134679910804405 0.0 T{I|L}TT 0.67564 - 115 + 1 1.451 86398.3 0.7099999785423279 6252 4686 10931 HBL1_DMSO_200M_050219_2,10940 HBL1_DMSO_200M_050219_2,10940, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10941 59.122 193.0 516610.0 25 0 50461.0 + 38201 TPRHIIVRF 9 112 380.2327029314581 1137.6762793945743 3 380.2322570681572 MULTI CID FTMS 0 0 0 10931 219037.5 0.0170332915065241 5 -0.5534706115722656 10 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 17.86316937532769 0.3531482428618743 4 T[RP]H{I|L}{I|L}VR{M(Oxidation (M))|F} 9 0 + 43.8 0.0 0.0 3.8499 3.8499 71.457 0.0 0.0 0.0 11.962724883926654 4.371061393816497 4.371061393816497 4.371061393816497 0 1.055462187404089 0.0 0.0 0.2396518287104437 + + T[RP]H{I|L}{I|L}VR{M(Oxidation (M))|F};T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}[RV];T[RP]H{I|L}{M(Oxidation (M))|F}{I|L}[RV] 3.8499;3.4657;2.9875 +;-;- + 83 + 1 1.451 87007.1 1.0 6253 4686 10931 HBL1_DMSO_200M_050219_2,10941 HBL1_DMSO_200M_050219_2,10941,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10942 59.125 170.0 430900.0 25 0 42722.0 + 6684 EAYVQKLV 8 110 475.27180417085367 948.5290554085074 2 475.2743408083916 MULTI CID FTMS 0 0 0 10931 203045.203125 0.3863669069068998 1 -0.1021881103515625 11 Unmodified _EAYVQKLV_ ENSG00000158246|ENST00000289166|TENT5B;ENSG00000183508|ENST00000369448|TENT5C 32.116972079565 0.368454113111938 4 {[QV]|[N{I|L}]|[RA]|[KV]}YDVV{I|L}N 8 5 + 27.226 0.0 0.0 2.8703 2.8703 77.111 0.0 0.0 0.0 7.043841943742226 8.567111652000126 7.043841943742226 13.474608638947188 0 0.0356668758921828 0.7695510786217261 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}YDVV{I|L}N;[TA]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVV{I|L}N;{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}Y[W{I|L}];[KQ]{I|L}VY[W{I|L}];[KA]G{I|L}VY[W{I|L}];[KQ]V{I|L}Y[W{I|L}];[K{I|L}]QVY[W{I|L}];[KA]GV{I|L}Y[W{I|L}] 2.8703;1.4497;1.0803;0.98971;0.61095;0.60176;0.22455;0.223 -;-;-;-;-;-;-;- 355 1 1.451 60556.1 1.0 6254 4686 10931 HBL1_DMSO_200M_050219_2,10942 HBL1_DMSO_200M_050219_2,10942,EAYVQKLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10943 59.132 381.0 150330.0 25 0 16454.0 -1 0 76 909.0598697049136 2724.1577797149407 3 909.3951293826104 MULTI CID FTMS 0 0 0 10931 190577.03125 0.0727273748531014 4 -0.4379005432128906 12 4 [YG]S{[NV]|[RG]}SQ[TP]Y 10 -1 29.261 0.0 0.0 1.0741 0.0 0.0 0.0 1624.6544264354634 1624.6544264354634 14.48515608797898 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.4916440611282624 0.3252574989159953 [YG]S{[NV]|[RG]}SQ[TP]Y 1.0741 - 834 1 1.451 45215.7 1.0 6255 4686 10931 HBL1_DMSO_200M_050219_2,10943 HBL1_DMSO_200M_050219_2,10943, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10944 59.136 205.0 327590.0 25 0 30794.0 + 14969 ILPPDHLNGV 10 116 537.8009017780112 0 537.8010742068291 PEAK CID FTMS 0 0 0 10931 164047.421875 0.6380291061599959 5 -0.5534706115722656 13 Unmodified _ILPPDHLNGV_ ENSG00000078808|ENST00000360001|SDF4;nc|ENSG00000078808|Q9BRK5-3|SDF4;nc|ENSG00000078808|Q9BRK5-4|SDF4;nc|ENSG00000078808|Q9BRK5-6|SDF4;nc|ENSG00000078808|Q9BRK5|SDF4 36.12702656103203 0.1519005573994188 4 GN{I|L} 3 9 15.049 0.0 0.0 1.4018 0.0 0.0 343.2481525777035 443.167824119022 786.4159766967255 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 GN{I|L} 1.4018 - 189 + 1 1.451 56556.5 1.0 6256 4686 10931 HBL1_DMSO_200M_050219_2,10944 HBL1_DMSO_200M_050219_2,10944,ILPPDHLNGV False True ILPPDHLNGV 59.136077 537.801074206829 3486376.25 10931.0 nc|ENSG00000078808|Q9BRK5-3|SDF4;;nc|ENSG00000078808|Q9BRK5-6|SDF4;;nc|ENSG00000078808|Q9BRK5|SDF4;;ENSG00000078808|ENST00000360001|SDF4;;nc|ENSG00000078808|Q9BRK5-4|SDF4 5.975769519805908 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10945 59.141 180.0 308290.0 25 0 28907.0 + 24155 LYQPSAESL 9 99 504.2545368728496 1006.4945208124992 2 504.2559387087822 MULTI CID FTMS 0 0 0 10931 154227.625 1.0 0 0.0 14 Unmodified _LYQPSAESL_ ENSG00000163481|ENST00000295704|RNF25 21.74664581756881 0.2544899275067181 4 WS{I|L} 3 7 22.039 0.0 0.0 2.1897 0.0 0.0 602.2885404431617 0.0 602.2885404431617 0.0 10.049406363485858 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 WS{I|L} 2.1897 - 95 + 1 1.451 46687.8 1.0 6257 4686 10931 HBL1_DMSO_200M_050219_2,10945 HBL1_DMSO_200M_050219_2,10945,LYQPSAESL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10946 59.147 323.0 503400.0 25 0 88260.0 + 32176 RVVAEELENV 10 128 579.3119363796615 1156.6093198261228 2 579.3119994997978 MULTI CID FTMS 0 0 0 10931 155702.046875 0.2699122103441368 -2 0.2671318054199219 15 Unmodified _RVVAEELENV_ ENSG00000167196|ENST00000308275|FBXO22;nc|ENSG00000167196|Q8NEZ5-3|FBXO22 49.52724829834842 0.0829255630816734 4 AEE{I|L}ENV 7 3 64.615 0.0 0.0 5.5866 0.0 0.0 354.23790175605626 0.0 354.23790175605626 0.0 47.119362349380495 0.0 0.0 0 1.055462187404089 0.0 1.110924374808178 0.0 + AEE{I|L}ENV 5.5866 + + 422 1 1.451 127185.8 1.0 6258 4686 10931 HBL1_DMSO_200M_050219_2,10946 HBL1_DMSO_200M_050219_2,10946,RVVAEELENV True True RVVAEELENV 59.146619 579.3126 9063708.0 10931.0 ENSG00000167196|ENST00000308275|FBXO22;;nc|ENSG00000167196|Q8NEZ5-3|FBXO22 5.30173905690511 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10947 59.154 422.0 187370.0 25 0 16784.0 + 14706 IIYDRDFSYN 10 95 653.3092748139146 0 653.3085204958916 PEAK CID FTMS 0 0 0 10931 161546.8125 1.0 0 0.0 16 Unmodified _IIYDRDFSYN_ ENSG00000167325|ENST00000300738|RRM1 79.42699986076722 0.0003172807220279 4 {I|L}YD{M(Oxidation (M))|F} 4 6 22.211 0.0 0.0 1.7025 0.0 0.0 113.08504776703953 650.2972506158811 763.3822983829207 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {I|L}YD{M(Oxidation (M))|F} 1.7025 - 81 + 1 1.451 64968.3 1.0 6259 4686 10931 HBL1_DMSO_200M_050219_2,10947 HBL1_DMSO_200M_050219_2,10947,IIYDRDFSYN True True IIYDRDFSYN 59.15415 653.308520495892 1421995.375 10931.0 ENSG00000167325|ENST00000300738|RRM1 7.54356034596761 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10948 59.16 340.0 351480.0 25 0 31558.0 -1 ILARMQEESL 10 130 603.3160462320207 1204.6175395308412 2 603.3160888552666 MULTI CID FTMS 0 0 0 10931 151068.5625 0.4878372049442547 -1 0.1040420532226562 17 Oxidation (M) _ILARM(Oxidation (M))QEESL_ ENSG00000109171|ENST00000264313|SLAIN2 30.63653989081413 0.2803493085145199 4 {I|L}{I|L}A{M(Oxidation (M))|F}AE{I|L}K 8 -1 80.75 0.0 0.0 6.7034 0.0 0.0 0.0 316.0427645318969 316.0427645318969 65.57319389984244 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.1861818737241734 0.0 {I|L}{I|L}A{M(Oxidation (M))|F}AE{I|L}K 6.7034 - 1208 + 1 1.451 87327.8 1.0 6260 4686 10931 HBL1_DMSO_200M_050219_2,10948 HBL1_DMSO_200M_050219_2,10948,ILARMQEESL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10949 59.163 108.0 445540.0 25 0 63316.0 + 19927 LIATDWCLATV 11 71 402.5462326891179 1204.6168686675535 3 402.5459777712822 MULTI CID FTMS 0 0 0 10931 134504.109375 0.4873895763418543 -1 0.1040420532226562 18 Unmodified _LIATDWCLATV_ REV__ENSG00000110756|ENST00000349215|HPS5;REV__nc|ENSG00000110756|Q9UPZ3-2|HPS5 14.95716135407024 0.7240205813188479 4 {I|L}{I|L}A[C(Carbamidomethyl (C))C]ETV 8 -1 42.797 0.0 0.0 3.5527 0.0 0.0 0.0 312.18987900995586 312.18987900995586 27.312215777050497 0.0 0.0 0.0 0 0.5 2.0 0.3807196863200844 0.0 {I|L}{I|L}A[C(Carbamidomethyl (C))C]ETV 3.5527 - 91 1 1.451 42759.7 1.0 6261 4686 10931 HBL1_DMSO_200M_050219_2,10949 HBL1_DMSO_200M_050219_2,10949,LIATDWCLATV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10950 59.176 800.0 88174.0 25 0 11657.0 + -1 VPPKSLEI 8 80 881.912173304008 1761.809793674816 2 882.4144164919853 MULTI CID FTMS 0 0 0 10931 132104.5625 0.634144149853984 4 -0.4379005432128906 19 nc|ENSG00000082438|Q53SF7-3|COBLL1;nc|ENSG00000082438|Q53SF7-2|COBLL1;ENSG00000082438|ENST00000652658|COBLL1 4 {I|L}Q 2 -1 17.752 0.0 0.0 1.0076 0.0 0.0 1502.6560288816502 0.0 1502.6560288816502 0.0 -0.0766297195611755 -0.0766297195611755 0.0 0 0.0 0.0 0.0 0.5189301784845296 {I|L}Q 1.0076 - 265 + 1 1.451 51967.5 0.5600000023841858 6262 4686 10931 HBL1_DMSO_200M_050219_2,10950 HBL1_DMSO_200M_050219_2,10950, False False VPPKSLEI 59.176435 882.414416491985 0.0 10931.0 nc|ENSG00000082438|Q53SF7-3|COBLL1;;nc|ENSG00000082438|Q53SF7-2|COBLL1;;ENSG00000082438|ENST00000652658|COBLL1 -0.4600443442662557 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10951 59.185 395.0 314520.0 25 0 12441.0 + 26684 NYLTRIHY 8 177 360.5262738207921 1078.5569920625762 3 360.5258666872978 MULTI CID FTMS 0 0 0 10931 125756.6875 1.0 0 0.0 20 Unmodified _NYLTRIHY_ ENSG00000067064|ENST00000381344|IDI1;nc|ENSG00000067064|Q13907|IDI1 5.731851221503515 0.7895402735786415 4 [YN]{I|L}Y 4 4 26.682 0.0 0.0 2.4739 0.0 0.0 0.0 522.2787569635374 522.2787569635374 13.187587626244124 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [YN]{I|L}Y 2.4739 - 31 + 1 1.451 103078.6 1.0 6263 4686 10931 HBL1_DMSO_200M_050219_2,10951 HBL1_DMSO_200M_050219_2,10951,NYLTRIHY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10953 59.189 17.0 3918600.0 25 0 583900.0 + 41130 VPAALKVV 8 68 398.768314767693 795.5220766021861 2 398.7682372927666 MULTI CID FTMS 0 0 0 10952 3194637.0 0.5314354855090021 2 -0.2000350952148437 1 Unmodified _VPAALKVV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 53.57557251787612 0.1224291679108181 4 VPAA{I|L}KVV 8 0 + 59.401 0.0 0.0 7.4669 7.4669 96.052 0.0 0.0 0.0 32.287691153284975 9.80835659879972 9.80835659879972 59.40072854738241 0 1.1421590589602533 1.6989700043360187 0.0 0.0 + + VPAA{I|L}KVV 7.4669 + + 195 + 1 1.459 58007.1 1.0 6264 4687 10952 HBL1_DMSO_200M_050219_2,10953 HBL1_DMSO_200M_050219_2,10953,VPAALKVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10954 59.191 32.0 1971000.0 25 0 326620.0 + 42048 VQVDGKIGL 9 69 464.7769029994221 927.5392530656444 2 464.7770263552666 MULTI CID FTMS 0 0 0 10952 1855921.0 0.8224578666280827 1 -0.1180953979492187 2 Unmodified _VQVDGKIGL_ ENSG00000137409|ENST00000373627|MTCH1;nc|ENSG00000137409|Q9NZJ7-2|MTCH1 36.12702656103203 0.0967173616627612 4 {[QV]|[N{I|L}]|[RA]|[KV]}VSVG[Q{I|L}]V 9 5 + 61.99 0.0 0.0 6.6833 6.6833 89.428 0.0 0.0 0.0 12.854991195224272 18.45901943275102 12.854991195224272 9.827796776480469 0 1.0 1.154901959985743 0.6861818737241735 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}VSVG[Q{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}VSGV[Q{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}[TA]{I|L}G[Q{I|L}]V;[KG]DV{I|L}G[Q{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}[TA]AV[Q{I|L}]V;[KG]D{I|L}VG[Q{I|L}]V;{[VA]|[{I|L}G]}GVSVG[Q{I|L}]V;[KG]DVAV[Q{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}[WR][Q{I|L}]V;[KG]D{I|L}GV[Q{I|L}]V 6.6833;5.6237;5.6046;5.003;4.545;4.36;4.3579;3.9434;3.3467;3.3005 -;-;-;-;-;-;-;-;-;- 460 1 1.459 53793.4 1.0 6265 4687 10952 HBL1_DMSO_200M_050219_2,10954 HBL1_DMSO_200M_050219_2,10954,VQVDGKIGL True True VQVDGKIGL 59.190608 464.777026355267 16843844.0 10952.0 nc|ENSG00000137409|Q9NZJ7-2|MTCH1;;ENSG00000137409|ENST00000373627|MTCH1 2.3113549749056497 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10955 59.192 43.0 1484500.0 25 0 242770.0 + 13833 HTVEDLVKV 9 90 520.2925814383997 1038.5706099435993 2 520.2931396365166 MULTI CID FTMS 0 0 0 10952 1306414.125 0.5960763484148129 1 -0.1180953979492187 3 Unmodified _HTVEDLVKV_ ENSG00000177084|ENST00000320574|POLE 57.72198328787511 0.0273433238377839 4 [HT]{NN|[MP]|[D{I|L}]|[EV]}D{I|L}VKV 9 0 + 60.27 0.0 0.0 5.8031 5.8031 86.811 0.0 0.0 0.0 2.243012119929091 46.29039059593687 2.243012119929091 12.001962355242952 0 1.392159058960253 0.0 1.3494850021680094 0.0 + + [HT]{NN|[MP]|[D{I|L}]|[EV]}D{I|L}VKV;[HT][YR]HVKV;[HT]{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}VRV 5.8031;4.6475;1.6642 +;-;- + 132 1 1.459 52623.6 1.0 6266 4687 10952 HBL1_DMSO_200M_050219_2,10955 HBL1_DMSO_200M_050219_2,10955,HTVEDLVKV True True HTVEDLVKV 59.191823 520.293139636517 16067245.0 10952.0 ENSG00000177084|ENST00000320574|POLE 5.74298890431722 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10956 59.193 43.0 1323600.0 25 0 226060.0 -1 VNFCFHCYCFC 11 65 778.7826972150096 1555.5508414968192 2 778.7840453982353 MULTI CID FTMS 0 0 0 10952 1201472.25 0.9483766124846816 1 -0.1180953979492187 4 3 Carbamidomethyl (C) _VNFC(Carbamidomethyl (C))FHC(Carbamidomethyl (C))YC(Carbamidomethyl (C))FC_ L1PA14_dup722|chr4:35336-35828:-|1.1683807787415716|0.0538723938996896|4.44|40.0|28|2|anti-sense 0.0 0.8751479354844584 4 YEMGSE 6 -1 38.404 0.0 0.0 2.4688 0.0 0.0 320.1601174502849 536.1293282541676 856.2894457044524 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YEMGSE 2.4688 - 113 + 1 1.459 48321.3 1.0 6267 4687 10952 HBL1_DMSO_200M_050219_2,10956 HBL1_DMSO_200M_050219_2,10956,VNFCFHCYCFC False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 10957 59.195 79.0 758270.0 25 0 65076.0 + 21803 KVVDRIYSL 9 78 546.8230814299793 1091.6316099267583 2 546.8234741091728 MULTI CID FTMS 0 0 0 10952 644228.5 1.0 0 0.0 5 Unmodified _LPNHRVLIM_ nc|ENSG00000066279|Q8IZT6-2|ASPM;ENSG00000066279|ENST00000367409|ASPM 39.957323273325 0.0756908302845263 4 {I|L}PNH 4 5 48.136 0.0 0.0 4.4096 0.0 0.0 0.0 627.3669527643186 627.3669527643186 7.201140738196017 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.5 + {I|L}PNH 4.4096 + + 85 + 1 1.459 52350.4 1.0 6268 4687 10952 HBL1_DMSO_200M_050219_2,10957 HBL1_DMSO_200M_050219_2,10957,LPNHRVLIM True True KVVDRIYSL 59.194864 546.823474109173 4781904.5 10952.0 nc|ENSG00000066279|Q8IZT6-2|ASPM;;ENSG00000066279|ENST00000367409|ASPM 5.005707422892253 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10958 59.197 115.0 619590.0 25 0 63147.0 + 45644 YVPETVYRV 9 65 563.300550409963 1124.5865478867258 2 563.3010131716728 MULTI CID FTMS 0 0 0 10952 531306.1875 0.4706529635876041 2 -0.2000350952148437 6 Unmodified _YVPETVYRV_ ENSG00000082701|ENST00000264235|GSK3B;ENSG00000105723|ENST00000222330|GSK3A;nc|ENSG00000082701|P49841-2|GSK3B 29.081581746732265 0.1611639662936252 4 [YV]PETV 6 3 60.278 0.0 0.0 5.36 0.0 0.0 0.0 433.2204989068969 433.2204989068969 37.60213141451892 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.805462187404089 0.0 + [YV]PETV 5.36 + + 71 + 1 1.459 60655.4 1.0 6269 4687 10952 HBL1_DMSO_200M_050219_2,10958 HBL1_DMSO_200M_050219_2,10958,YVPETVYRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10959 59.199 99.0 687200.0 25 0 64871.0 + 26580 NVLVQGKQV 9 78 492.79571356597575 983.5768741987516 2 492.7959167361259 MULTI CID FTMS 0 0 0 10952 356242.09375 0.622629422405544 -2 0.2062301635742187 7 Unmodified _NVLVQGKQV_ ENST00000566319.2_1_16:47699793-47733274:+|nuORF;nc|ENSG00000102893|Q93100-3|PHKB;nc|ENSG00000102893|Q93100-4|PHKB 26.88365393820708 0.1891292719743517 4 {[NV]|[RG]}{I|L}V[KS][DP]{I|L} 9 5 + 37.17 0.0 0.0 3.779 3.779 71.059 0.0 0.0 0.0 7.147642715192511 4.259687322722812 4.259687322722812 4.259687322722812 0 0.8494850021680094 0.0 0.3807196863200844 0.3494850021680094 {[NV]|[RG]}{I|L}V[KS][DP]{I|L};{[NV]|[RG]}{I|L}V[KS][EP]V;{[NV]|[RG]}{I|L}PK{[ET]|[MV]}A{I|L} 3.779;3.3459;2.9769 -;-;- 275 + 1 1.459 58347.5 1.0 6270 4687 10952 HBL1_DMSO_200M_050219_2,10959 HBL1_DMSO_200M_050219_2,10959,NVLVQGKQV False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 10960 59.205 313.0 313140.0 25 0 46935.0 + 15620 KINEAIVAV 9 108 478.7926739816839 955.5707950301678 2 478.7925903201103 MULTI CID FTMS 0 0 0 10952 279356.59375 1.0 0 0.0 8 Unmodified _IQEGKLVGI_ ENSG00000087302|ENST00000261700|RTRAF 29.081581746732265 0.1611639662936252 4 {[VA]|[{I|L}G]}{[DA]|[EG]}AK{I|L}VAV 10 4 + 72.757 0.0 0.0 7.614 7.614 79.805 0.0 0.0 0.0 1.2763625255165325 16.53212513775344 1.2763625255165325 1.2763625255165325 0 1.3494850021680094 1.3979400086720375 0.0 0.2887254899964357 {[VA]|[{I|L}G]}{[DA]|[EG]}AK{I|L}VAV;{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}K{I|L}VAV;{[DA]|[EG]}Q{I|L}K{I|L}VAV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}AK{I|L}VAV;{[VA]|[{I|L}G]}{[DA]|[EG]}KA{I|L}VAV;{[DA]|[EG]}GA{I|L}K{I|L}VAV;{[CP]|[EA]}N{I|L}K{I|L}VAV;{[QN]|[E{I|L}]|[KN]}NAK{I|L}VAV;{[DA]|[EG]}G{I|L}AK{I|L}VAV;{[VA]|[{I|L}G]}{[DA]|[EG]}AKV{I|L}AV 7.614;7.4804;7.3543;7.1654;7.1147;7.0421;6.9811;6.7969;6.727;6.6702 -;-;-;-;-;-;-;-;-;- 1206 1 1.459 79844.7 1.0 6271 4687 10952 HBL1_DMSO_200M_050219_2,10960 HBL1_DMSO_200M_050219_2,10960,IQEGKLVGI False False KINEAIVAV 59.205115 478.79259032011 2267614.75 10952.0 ENSG00000087302|ENST00000261700|RTRAF 2.0345195531845093 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10961 59.208 148.0 419540.0 25 0 45385.0 + 25776 DGHPVVVNI 9 89 475.258246890472 948.501940847744 2 475.2572509646416 MULTI CID FTMS 0 0 0 10952 285130.5625 0.6937289690897464 -1 0.1021881103515625 9 Unmodified _NIYKANNI_ ENSG00000105135|ENST00000263383|ILVBL 24.67388899826682 0.525179942228231 4 {[QV]|[N{I|L}]|[RA]|[KV]}{[YD]|[{M(Oxidation (M))|F}M]}VVN{I|L} 8 3 + 44.843 0.0 0.0 4.7278 4.7278 73.587 0.0 0.0 0.0 3.640078085766092 12.636824930454011 3.640078085766092 3.640078085766092 0 0.5 1.2218487496163564 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{[YD]|[{M(Oxidation (M))|F}M]}VVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[YN]VVN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[YD]|[{M(Oxidation (M))|F}M]}VVGG{I|L};{[NV]|[RG]}[YE]VVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[YN]VVGG{I|L};[TA][W{M(Oxidation (M))|F}]VVN{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YV]VVN{I|L};VV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]VVN{I|L};{[NV]|[RG]}[YE]VVGG{I|L};[QP][H{I|L}]EVN{I|L} 4.7278;4.344;3.7513;3.6252;3.3675;3.2263;3.1222;2.9905;2.6487;2.328 -;-;-;-;-;-;-;-;-;- 315 1 1.459 53758.9 1.0 6272 4687 10952 HBL1_DMSO_200M_050219_2,10961 HBL1_DMSO_200M_050219_2,10961,NIYKANNI False False DGHPVVVNI 59.20806 475.257250964642 6522992.5 10952.0 ENSG00000105135|ENST00000263383|ILVBL 6.316771984100342 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10962 59.222 800.0 190310.0 25 0 33085.0 -1 0 83 1130.784501369129 3389.331674707587 3 1131.454150378704 MULTI CID FTMS 0 0 0 10952 226618.140625 1.0 0 0.0 10 4 {M(Oxidation (M))|F}[DC]Y[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}G 8 -1 10.891 0.0 0.0 0.32132 0.0 0.0 946.3465195335624 1384.6299792719783 2330.976498805541 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[DC]Y[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}G 0.32132 - 76 + 1 1.459 115798.7 0.7099999785423279 6273 4687 10952 HBL1_DMSO_200M_050219_2,10962 HBL1_DMSO_200M_050219_2,10962, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10963 59.236 800.0 179840.0 25 0 18048.0 + -1 MLSETSMHSLY 11 131 657.7903335168909 1313.5661141005817 2 657.7911254763603 MULTI CID FTMS 0 0 0 10952 215164.609375 0.1900718468512736 2 -0.2000350952148437 11 Oxidation (M) _MLSETSM(Oxidation (M))HSLY_ REV__ENST00000515837.6_1_11:61166042-61166276:+|nuORF 13.042465956692816 0.7638483625850725 4 {[TV]|[{I|L}S]}MEES 6 -1 61.828 0.0 0.0 4.7069 0.0 0.0 0.0 634.2714327447874 634.2714327447874 42.65387939435976 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.8494850021680094 0.0 {[TV]|[{I|L}S]}MEES 4.7069 - 449 + 1 1.459 108294.3 0.9200000166893004 6274 4687 10952 HBL1_DMSO_200M_050219_2,10963 HBL1_DMSO_200M_050219_2,10963,MLSETSMHSLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10964 59.24 218.0 349780.0 25 0 35161.0 + -1 AMKVPLSL 8 114 437.7573125475687 873.5000721619374 2 437.7572509646416 MULTI CID FTMS 0 0 0 10952 199822.109375 0.6182193952608424 -1 0.1021881103515625 12 Oxidation (M) _AM(Oxidation (M))KVPLSL_ REV__ENST00000480436.5_1_20:13415759-13610725:-|nuORF;REV__nc|ENSG00000089123|Q9H6P5-3|TASP1 30.22481116460888 0.4082965392918993 4 [KP]V{I|L}SMS{I|L} 8 -1 + 36.464 0.0 0.0 4.1744 4.1744 80.519 0.0 0.0 0.0 3.979400086720375 21.85972531752853 3.979400086720375 12.730686584013952 0 1.0044321917401078 0.0 0.3054621874040891 0.0 [KP]V{I|L}SMS{I|L};{[TV]|[{I|L}S]}V[KP]MS{I|L};{[TV]|[{I|L}S]}[WR]{I|L}S{I|L};[KP]V{[MS]|[{M(Oxidation (M))|F}A]}{I|L}S{I|L};[KP]V{I|L}[PG][YT] 4.1744;2.717;2.1365;0.98382;0.87795 -;-;-;-;- 190 1 1.459 63513.3 1.0 6275 4687 10952 HBL1_DMSO_200M_050219_2,10964 HBL1_DMSO_200M_050219_2,10964,AMKVPLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10965 59.244 205.0 526370.0 25 0 54353.0 41267 VPHAITVSV 9 112 461.771297337338 921.528041741476 2 461.7716552615166 MULTI CID FTMS 0 0 0 10952 171192.984375 0.5374353207305943 -1 0.1021881103515625 13 Unmodified _VPHAITVSV_ ENSG00000137807|ENST00000679126|KIF23;ENST00000558303.5_1_15:69737113-69740143:+|nuORF;ENST00000560125.1_1_15:69737113-69739281:+|nuORF;nc|ENSG00000137807|Q02241-2|KIF23;nc|ENSG00000137807|Q02241-3|KIF23;nc|ENSG00000137807|Q02241|KIF23 30.22481116460888 0.1466181017706357 4 [R{M(Oxidation (M))|F}]TMR{I|L}V 7 8 + 27.016 0.0 0.0 2.9317 2.9317 63.076 0.0 0.0 0.0 3.863328796621129 1.102963884796889 1.102963884796889 1.102963884796889 0 0.3807196863200844 0.0 0.4247425010840047 0.0 [R{M(Oxidation (M))|F}]TMR{I|L}V;[R{M(Oxidation (M))|F}]TVP[R{M(Oxidation (M))|F}];[R{M(Oxidation (M))|F}]T{I|L}AC{I|L}V;[R{M(Oxidation (M))|F}]TV{[MG]|[TS]}{I|L}V;[R{M(Oxidation (M))|F}]TV{I|L}{[WT]|[RM]};[R{M(Oxidation (M))|F}]T{I|L}{[WT]|[RM]}V;[R{M(Oxidation (M))|F}]TV{[DS]|[MA]|[CV]|TT}VV;[R{M(Oxidation (M))|F}]TMRV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VAPV[R{M(Oxidation (M))|F}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VAVP[R{M(Oxidation (M))|F}] 2.9317;2.812;2.769;2.443;2.2652;2.2453;2.2347;1.9231;1.9083;1.8108 -;-;-;-;-;-;-;-;-;- 774 + 1 1.459 87195.6 1.0 6276 4687 10952 HBL1_DMSO_200M_050219_2,10965 HBL1_DMSO_200M_050219_2,10965,VPHAITVSV False True DADYARLV 59.243762 461.771655261517 1450533.875 10952.0 ENSG00000148606|ENST00000372371|POLR3A 2.236306677261988 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10966 59.253 536.0 421730.0 25 0 51556.0 + 33602 SIPNRIPKI 9 184 346.55394165184657 1036.6399955557397 3 346.5535766482353 MULTI CID FTMS 0 0 0 10952 171828.21875 0.3694953637546649 -4 0.4346733093261719 14 Unmodified _SIPNRIPKI_ ENSG00000164323|ENST00000458385|CFAP97;nc|ENSG00000164323|Q9P2B7-2|CFAP97 23.78978130925829 0.2284941198415988 4 {[TV]|[{I|L}S]}PN 4 5 35.164 0.0 0.0 3.3921 0.0 0.0 0.0 622.4050997369749 622.4050997369749 11.320585334323738 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.3252574989159953 + {[TV]|[{I|L}S]}PN 3.3921 + + 147 + 1 1.459 189106.9 1.0 6277 4687 10952 HBL1_DMSO_200M_050219_2,10966 HBL1_DMSO_200M_050219_2,10966,SIPNRIPKI False True SIPNRIPKI 59.253173 346.553576648235 19818090.0 10952.0 nc|ENSG00000164323|Q9P2B7-2|CFAP97;;ENSG00000164323|ENST00000458385|CFAP97 3.0537633895874023 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10967 59.26 290.0 327430.0 25 0 17760.0 + 24932 MPPLNTQRI 9 132 535.2944441029346 1068.574335272669 2 535.2955200076103 MULTI CID FTMS 0 0 0 10952 157689.578125 0.6939807862275098 3 -0.3357124328613281 15 Unmodified _MPPLNTQRI_ nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078-8|MEF2A 23.78978130925829 0.2284941198415988 4 MPP{I|L}{I|L}[PA]MS{I|L} 10 5 + 59.395 0.0 0.0 5.5583 5.5583 71.808 0.0 0.0 0.0 23.17462482185602 0.9021870068254004 0.9021870068254004 0.9021870068254004 0 0.6109243748081782 2.0 0.1382104921644452 0.0 MPP{I|L}{I|L}[PA]MS{I|L};MPP{I|L}{I|L}[PA]YAP;MPP{I|L}{I|L}[PA]MTV;MP{I|L}P{I|L}[PA]MS{I|L};MPP{I|L}N[RD]KV;MP{I|L}P{I|L}[PA]YAP;MP{I|L}P{I|L}[PA]MTV;MPP{I|L}{I|L}[PA][PA]Y;MPP{I|L}{I|L}[PA][PS]{M(Oxidation (M))|F};MP{I|L}PN[RD]KV 5.5583;5.4739;5.4134;4.9042;4.835;4.8198;4.7593;4.6842;4.4025;4.1809 -;-;-;-;-;-;-;-;-;- 397 + 1 1.459 79979.9 1.0 6278 4687 10952 HBL1_DMSO_200M_050219_2,10967 HBL1_DMSO_200M_050219_2,10967,MPPLNTQRI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 10968 59.264 231.0 360550.0 25 0 28320.0 + 32354 RYPEEDYESF 10 94 667.7803914104912 1333.5462298877824 2 667.7818481326103 MULTI CID FTMS 0 0 0 10952 148930.140625 0.6069012384975485 -2 0.2062301635742187 16 Unmodified _RYPEEDYESF_ ENSG00000137145|ENST00000434457|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C 37.07464296494664 0.1884581770199685 4 DTYDE[RH]S{M(Oxidation (M))|F} 9 7 60.567 0.0 0.0 4.5418 0.0 0.0 165.08448439070963 0.0 165.08448439070963 0.0 49.32940428116434 0.0 0.0 0 0.7215141619232908 0.0 0.75 0.4247425010840047 DTYDE[RH]S{M(Oxidation (M))|F} 4.5418 - 199 + 1 1.459 64819.4 1.0 6279 4687 10952 HBL1_DMSO_200M_050219_2,10968 HBL1_DMSO_200M_050219_2,10968,RYPEEDYESF False True RYPEEDYESF 59.264043 667.78184813261 2720218.0 10952.0 nc|ENSG00000137145|Q5VZ89-5|DENND4C;;nc|ENSG00000137145|Q5VZ89-3|DENND4C;;ENSG00000137145|ENST00000434457|DENND4C;;nc|ENSG00000137145|Q5VZ89|DENND4C 8.056156635284424 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10969 59.278 800.0 99524.0 25 0 23284.0 -1 0 54 1141.103705600554 3420.2892874018617 3 1141.771777331829 MULTI CID FTMS 0 0 0 10952 148527.4375 1.0 0 0.0 17 4 Y{M(Oxidation (M))|F} 2 -1 7.9588 0.0 0.0 0.23269 0.0 0.0 1309.421319727837 1797.705306883761 3107.126626611598 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.23269 - 10 + 1 1.459 71244.1 0.4900000095367431 6280 4687 10952 HBL1_DMSO_200M_050219_2,10969 HBL1_DMSO_200M_050219_2,10969, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10970 59.292 800.0 152960.0 25 0 10293.0 + -1 VAAPGGALASV 11 116 911.9129936367476 1821.811434340296 2 912.4152709841728 MULTI CID FTMS 0 0 0 10952 144298.609375 0.7190702296200738 -3 0.3693199157714844 18 ENST00000495554.1_1_1:153606776-153609130:+|nuORF 4 [QP]SVKPASV 9 -1 44.443 0.0 0.0 2.4395 0.0 0.0 0.0 925.289131444064 925.289131444064 2.997437179479334 0.0 0.0 0.0 0 0.0 1.0 1.6641478515490356 0.0 [QP]SVKPASV 2.4395 - 1451 1 1.459 82922.7 0.5899999737739563 6281 4687 10952 HBL1_DMSO_200M_050219_2,10970 HBL1_DMSO_200M_050219_2,10970, False False VAAPGGALASV 59.291758 912.415270984173 373100.90625 10952.0 ENST00000495554.1_1_1:153606776-153609130:+|nuORF 4.07335638999939 1.0 False 11.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10971 59.299 344.0 271540.0 25 0 22772.0 + 1827 ALTGLIRPQ 9 118 484.7982447244446 0 484.7981445193291 PEAK CID FTMS 0 0 0 10952 144047.34375 0.9186453000370088 1 -0.1180953979492187 19 Unmodified _ALTGLIRPQ_ ENSG00000188177|ENST00000409871|ZC3H6 28.486842064014134 0.1241350795510704 4 PE 2 8 15.701 0.0 0.0 1.6227 0.0 0.0 98.08425070797144 640.3798031169108 738.4640538248823 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.0 PE 1.6227 - 271 + 1 1.459 76811.8 1.0 6282 4687 10952 HBL1_DMSO_200M_050219_2,10971 HBL1_DMSO_200M_050219_2,10971,ALTGLIRPQ True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10972 59.303 194.0 362010.0 25 0 31742.0 19211 LEGEIEDLDL 10 96 573.2832709501703 1144.5519889671405 2 573.7933837771416 MULTI CID FTMS 0 0 0 10952 131273.9375 0.0861603331909896 -4 0.4346733093261719 20 Unmodified _LEGEIEDLDL_ ENSG00000197653|ENST00000673944|DNAH10;nc|ENSG00000197653|Q8IVF4|DNAH10 20.453626601364224 0.5043500229302764 4 [DV]{I|L}E{[MG]|[TS]}QT[RP] 10 9 + 41.432 0.0 0.0 3.6199 3.6199 47.484 0.0 0.0 0.0 8.962505624616377 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3807196863200844 0.0 [DV]{I|L}E{[MG]|[TS]}QT[RP];[DV]{I|L}E{[MG]|[TS]}QE[KP];[DV]{I|L}MWQE[KP];[DV]{I|L}MDAQE[KP];[DV]{I|L}MDAQT[RP];[DV]{I|L}E[C(Carbamidomethyl (C))R]E[KP];[DV]E{I|L}{[MG]|[TS]}QT[RP];[DV]E{I|L}{[MG]|[TS]}QE[KP];{[QN]|[E{I|L}]|[KN]}VD{[MG]|[TS]}QE[KP];{[QN]|[E{I|L}]|[KN]}VD{[MG]|[TS]}QT[RP] 3.6199;3.6199;3.5907;3.4815;3.4815;3.0492;2.94;2.94;2.8369;2.8369 -;-;-;-;-;-;-;-;-;- 781 1 1.459 58416.4 1.0 6283 4687 10952 HBL1_DMSO_200M_050219_2,10972 HBL1_DMSO_200M_050219_2,10972,LEGEIEDLDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10974 59.308 27.0 4333800.0 25 0 1165200.0 -1 0 37 1123.4609839871978 3367.3611225617933 3 1123.796557605267 MULTI CID FTMS 0 0 0 10973 6506391.5 1.0 0 0.0 1 4 Y{M(Oxidation (M))|F} 2 -1 7.9588 0.0 0.0 0.23635 0.0 0.0 1310.4604400440187 1743.7706414966658 3054.2310815406845 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.23635 - 10 + 1 1.465 106280.6 1.0 6284 4688 10973 HBL1_DMSO_200M_050219_2,10974 HBL1_DMSO_200M_050219_2,10974, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 10975 59.309 11.0 4557200.0 25 0 820000.0 + 21371 LPFRGSGTAI 10 71 509.7878803784988 1017.5612078237976 2 509.7881347537041 MULTI CID FTMS 0 0 0 10973 5576660.0 1.0 0 0.0 2 Unmodified _LPFRGSGTAI_ ENSG00000122484|ENST00000610020|RPAP2;nc|ENSG00000122484|Q8IXW5-2|RPAP2 31.26834338654808 0.266153677697784 4 {I|L}P 2 8 36.682 0.0 0.0 3.6049 0.0 0.0 0.0 804.4021090143186 804.4021090143186 9.643331241078172 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + {I|L}P 3.6049 + + 68 + 1 1.465 45712.8 1.0 6285 4688 10973 HBL1_DMSO_200M_050219_2,10975 HBL1_DMSO_200M_050219_2,10975,LPFRGSGTAI False True LPFRGSGTAI 59.308841 509.788134753704 75734576.0 10973.0 nc|ENSG00000122484|Q8IXW5-2|RPAP2;;ENSG00000122484|ENST00000610020|RPAP2 2.111518899599711 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10976 59.31 43.0 1219200.0 25 0 161670.0 + 3870 DAKSTIVSI 9 78 467.2663673279935 932.5181817227872 2 467.2662536501884 MULTI CID FTMS 0 0 0 10973 1375672.625 0.5474680392706794 2 -0.2176170349121093 3 Unmodified _DAKSTIVSI_ ENSG00000166479|ENST00000299608|TMX3;ENST00000578816.1_1_18:66344172-66346774:-|nuORF 31.26834338654808 0.1333407332142048 4 {[TV]|[{I|L}S]}NST{I|L}VS{I|L} 9 3 + 53.495 0.0 0.0 5.7367 5.7367 84.597 0.0 0.0 0.0 15.96664959441256 36.50569046902348 15.96664959441256 9.208187539523747 0 0.8182503180159344 1.5228787452803376 0.7742275032520141 0.0 {[TV]|[{I|L}S]}NST{I|L}VS{I|L};{[TV]|[{I|L}S]}GGST{I|L}VS{I|L};[VS]QST{I|L}VS{I|L};{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}{[QS]|[NT]}VS{I|L};[VS][AG]ST{I|L}VS{I|L};{[TV]|[{I|L}S]}[KT]{[DA]|[EG]}VS{I|L};{[SA]|[TG]}[VG]ST{I|L}VS{I|L};{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}K{[DA]|[EG]}S{I|L};[VS][C(Carbamidomethyl (C))R]{I|L}VS{I|L};{[TV]|[{I|L}S]}[KT]V{[DA]|[EG]}S{I|L} 5.7367;4.7492;3.9469;3.3581;2.9594;2.6865;2.6711;2.5798;2.0239;1.9082 -;-;-;-;-;-;-;-;-;- 291 1 1.465 47928.7 1.0 6286 4688 10973 HBL1_DMSO_200M_050219_2,10976 HBL1_DMSO_200M_050219_2,10976,DAKSTIVSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10977 59.311 35.0 1110600.0 25 0 112220.0 + 17764 KQFEGTVEI 9 62 525.7769697331903 1049.5393865331805 2 525.7772704958916 MULTI CID FTMS 0 0 0 10973 1296994.25 0.4812168756123067 1 -0.081939697265625 4 Unmodified _KQFEGTVEI_ ENSG00000139618|ENST00000380152|BRCA2 41.8396318013385 0.0653578398400075 4 [{M(Oxidation (M))|F}E][KQ]{[SA]|[TG]}VE{I|L} 9 4 + 37.641 0.0 0.0 3.5864 3.5864 75.047 0.0 0.0 0.0 3.94279652582086 30.65098406534461 3.94279652582086 8.874818136533456 0 0.75 0.0 0.8494850021680094 0.805462187404089 [{M(Oxidation (M))|F}E][KQ]{[SA]|[TG]}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}MR[KQ]{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KQ]{M(Oxidation (M))|F}{I|L} 3.5864;2.7408;2.276 -;-;- 64 1 1.465 36627.7 1.0 6287 4688 10973 HBL1_DMSO_200M_050219_2,10977 HBL1_DMSO_200M_050219_2,10977,KQFEGTVEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10978 59.313 53.0 1086600.0 25 0 105600.0 + 31050 RLIEESVTV 9 79 523.2980211804338 1044.5814894276675 2 523.2984496951103 MULTI CID FTMS 0 0 0 10973 883699.125 0.2628018250128286 -2 0.2202835083007812 5 Unmodified _RLIEESVTV_ ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769-3|NUP160;nc|ENSG00000030066|Q12769|NUP160 39.21299971606389 0.0797768173001226 4 EESVTV 6 3 63.493 0.0 0.0 6.0783 0.0 0.0 382.27037245918126 0.0 382.27037245918126 0.0 49.513356515246514 0.0 0.0 0 1.305462187404089 0.0 1.2302046884880935 0.0 + EESVTV 6.0783 + + 108 1 1.465 52155.4 1.0 6288 4688 10973 HBL1_DMSO_200M_050219_2,10978 HBL1_DMSO_200M_050219_2,10978,RLIEESVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10979 59.315 85.0 802600.0 25 0 90456.0 + 15380 IPNFPRSTV 9 77 515.787589036681 1029.5606251401618 2 515.7880126833916 MULTI CID FTMS 0 0 0 10973 708125.125 0.218377666625985 -3 0.3243255615234375 6 Unmodified _IPNFPRSTV_ ENSG00000198805|ENST00000361505|PNP;ENST00000557229.5_1_14:20937683-20942788:+|nuORF 60.07390631473393 0.0260411565414776 4 {I|L}PN{M(Oxidation (M))|F}P[KA]M{I|L} 9 4 + 71.353 0.0 0.0 6.9305 6.9305 89.177 0.0 0.0 0.0 42.68114684785509 2.993493689375839 2.993493689375839 9.208187539523747 0 0.7742275032520141 1.6989700043360187 0.0 1.1549471895720984 {I|L}PN{M(Oxidation (M))|F}P[KA]M{I|L};{I|L}PGG{M(Oxidation (M))|F}P[KA]M{I|L};{I|L}PN[KQ][KC]TV;{I|L}PN[KQ][KC]S{I|L};[YV][KA]PP{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}PP[KA]M{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[{I|L}A]P{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 6.9305;6.0361;4.9853;4.4774;3.7278;2.5138;1.1517 -;-;-;-;-;-;- 149 + 1 1.465 61748.1 1.0 6289 4688 10973 HBL1_DMSO_200M_050219_2,10979 HBL1_DMSO_200M_050219_2,10979,IPNFPRSTV True True IPNFPRSTV 59.314516 515.788012683392 120827628.0 10973.0 ENSG00000198805|ENST00000361505|PNP;;ENST00000557229.5_1_14:20937683-20942788:+|nuORF 6.5568461418151855 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10980 59.317 108.0 676800.0 25 0 68696.0 + 27910 PLSTRNFYMLV 11 102 670.8555228390702 1339.6964927449403 2 670.8562499880791 MULTI CID FTMS 0 0 0 10973 537007.5625 0.5118198214684185 -1 0.1180953979492187 7 Unmodified _PLSTRNFYMLV_ REV__ENSG00000113712|ENST00000377843|CSNK1A1;REV__nc|ENSG00000113712|P48729-2|CSNK1A1;REV__nc|ENSG00000113712|P48729-3|CSNK1A1 9.38312468134398 0.8308777417566128 4 [{I|L}P]S[VP]TATAQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 13 -1 + 51.807 0.0 0.0 3.867 3.867 74.17 0.0 0.0 0.0 6.575037448240174 30.40979017601082 6.575037448240174 6.65012984576412 0 0.2742275032520141 1.0457574905606752 1.201163485412895 0.0 [{I|L}P]S[VP]TATAQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]S{I|L}TP{[SA]|[TG]}AQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]S{I|L}TT[PG]AQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]S{I|L}[PS]ATAQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]ST{I|L}P{[SA]|[TG]}AQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]S[VP]TATA[AG]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]ST{I|L}T[PG]AQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]ST[VP]ATAQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]S[PG]T{I|L}TAQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]S{I|L}A[PS]TAQ{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 3.867;3.3706;3.2987;3.2862;3.2392;3.1898;3.1672;3.1548;3.1068;3.0707 -;-;-;-;-;-;-;-;-;- 1949 1 1.465 59606.4 1.0 6290 4688 10973 HBL1_DMSO_200M_050219_2,10980 HBL1_DMSO_200M_050219_2,10980,PLSTRNFYMLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10981 59.319 122.0 401470.0 25 0 28194.0 + -1 VEQFGCSMM 9 85 552.7095915737614 1103.4046302143229 2 552.7101318240166 MULTI CID FTMS 0 0 0 10973 499660.5 0.1494356913659298 -2 0.2202835083007812 8 Carbamidomethyl (C),Oxidation (M) _VEQFGC(Carbamidomethyl (C))SM(Oxidation (M))M_ REV__nc|ENSG00000181396|Q6PK18-2|OGFOD3 13.90604991867851 0.4602628045680013 4 {NN|[MP]|[D{I|L}]|[EV]}QSQ 5 -1 32.113 0.0 0.0 2.9103 0.0 0.0 0.0 529.1218355768186 529.1218355768186 17.453050258017008 0.0 0.0 0.0 0 0.5941876774005248 1.0457574905606752 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}QSQ 2.9103 - 69 + 1 1.465 46082.6 1.0 6291 4688 10973 HBL1_DMSO_200M_050219_2,10981 HBL1_DMSO_200M_050219_2,10981,VEQFGCSMM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10982 59.322 132.0 671400.0 25 0 127610.0 + 9833 FPEEEWRHV 9 94 410.1964458952241 1227.5675082858722 3 410.1961852908134 MULTI CID FTMS 0 0 0 10973 483633.65625 1.0 0 0.0 9 Unmodified _FPEEEWRHV_ ENSG00000197037|ENST00000394152|ZSCAN25;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 45.69961567697781 0.0497987121815769 4 {M(Oxidation (M))|F}PEEEWRHV 9 0 + 58.669 0.0 0.0 4.7793 4.7793 85.278 0.0 0.0 0.0 44.86798958928647 5.626018059469359 5.626018059469359 34.3409050950852 0 0.2887254899964357 0.0 0.7302046884880937 0.0 + + {M(Oxidation (M))|F}PEEEWRHV;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[HC]{[DA]|[EG]}RHV;[YV][HC]EWRHV;[EP]EE[RP][TP]HH;{M(Oxidation (M))|F}PV{M(Oxidation (M))|F}[WY]{[SA]|[TG]}[DP];{M(Oxidation (M))|F}PV{M(Oxidation (M))|F}[Y{M(Oxidation (M))|F}][Y{M(Oxidation (M))|F}]V;{[ET]|[MV]}{[SA]|[TG]}[WY]V{M(Oxidation (M))|F}PE;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}V[Y{M(Oxidation (M))|F}][Y{M(Oxidation (M))|F}]V;[YV]E[HC]WRHV;{M(Oxidation (M))|F}VP{M(Oxidation (M))|F}[Y{M(Oxidation (M))|F}][Y{M(Oxidation (M))|F}]V 4.7793;1.9818;1.2413;1.0471;0.91399;0.90717;0.81221;0.80539;0.75085;0.66194 +;-;-;-;-;-;-;-;-;- + 303 + 1 1.465 75585.8 1.0 6292 4688 10973 HBL1_DMSO_200M_050219_2,10982 HBL1_DMSO_200M_050219_2,10982,FPEEEWRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10983 59.327 243.0 325800.0 25 0 39063.0 + 43197 VYYGHTNYIY 10 92 646.8015131562315 1291.588473379263 2 646.8015014529228 MULTI CID FTMS 0 0 0 10973 425708.0625 0.9618743485049408 -1 0.1180953979492187 10 Unmodified _VYYGHTNYIY_ ENSG00000137055|ENST00000397292|PLAA 45.69961567697781 0.105390671673896 4 [YV][Y{M(Oxidation (M))|F}]YVY{I|L}Y 9 4 + 71.176 0.0 0.0 5.5107 5.5107 54.692 0.0 0.0 0.0 7.041900319064581 16.478174818886373 7.041900319064581 0.0 0 1.2302046884880935 2.0 0.0 0.0 [YV][Y{M(Oxidation (M))|F}]YVY{I|L}Y;[YV][Y{M(Oxidation (M))|F}]YYV{I|L}Y;EEVQSYYV{I|L}Y;EEVQSYVY{I|L}Y;EE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GYYV{I|L}Y;EEV{[SA]|[TG]}GYVY{I|L}Y;EE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GYVY{I|L}Y;EEV{[SA]|[TG]}GYYV{I|L}Y;[YV][Y{M(Oxidation (M))|F}]Y{I|L}[YV]Y;EEV[YV]TNY{I|L}Y 5.5107;5.5107;4.9655;4.819;4.7774;4.6363;4.6309;4.531;3.5311;3.506 -;-;-;-;-;-;-;-;-;- 641 1 1.465 68161.5 1.0 6293 4688 10973 HBL1_DMSO_200M_050219_2,10983 HBL1_DMSO_200M_050219_2,10983,VYYGHTNYIY True True VYYGHTNYIY 59.326582 646.801501452923 4026348.25 10973.0 ENSG00000137055|ENST00000397292|PLAA 7.764744599660237 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10984 59.329 116.0 811700.0 25 0 89856.0 + 22521 LPWEEREKI 9 94 400.5520263960959 1198.6342497884878 3 400.5520812869072 MULTI CID FTMS 0 0 0 10973 392640.25 0.0978655361688997 -2 0.2202835083007812 11 Unmodified _LPWEEREKI_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 29.43715596616401 0.1566398223704148 4 {I|L}PWEE{[RE]|[WV]}K{I|L} 9 0 + 59.831 0.0 0.0 4.9916 4.9916 81.417 0.0 0.0 0.0 33.888662832205014 3.913187455970544 3.913187455970544 9.208187539523747 0 0.2742275032520141 1.3979400086720375 0.4247425010840047 0.4247425010840047 + + {I|L}PWEE{[RE]|[WV]}K{I|L};{I|L}P{[DA]|[EG]}EE{[RE]|[WV]}K{I|L};{I|L}P{I|L}[HS]{M(Oxidation (M))|F}[MN]K{I|L};{I|L}{I|L}P[HS]{M(Oxidation (M))|F}[MN]K{I|L};{I|L}{I|L}{[SA]|[TG]}Y{M(Oxidation (M))|F}[MN]K{I|L} 4.9916;4.2234;3.1347;1.8061;1.2039 +;-;-;-;- + 148 + 1 1.465 76805.4 1.0 6294 4688 10973 HBL1_DMSO_200M_050219_2,10984 HBL1_DMSO_200M_050219_2,10984,LPWEEREKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10985 59.333 184.0 461460.0 25 0 33946.0 + -1 LWNILSCCV 9 109 554.267539534672 1106.520526136144 2 554.2675659060478 MULTI CID FTMS 0 0 0 10973 328459.28125 0.300811266526637 -2 0.2202835083007812 12 Carbamidomethyl (C) _LWNILSC(Carbamidomethyl (C))CV_ REV__ENSG00000136492|ENST00000259008|BRIP1;REV__nc|ENSG00000136492|Q9BX63-2|BRIP1 14.838274106304384 0.4350285940865338 4 {[DA]|[EG]}{I|L}RA{I|L}Q 7 -1 46.699 0.0 0.0 4.2204 0.0 0.0 0.0 336.068183077872 336.068183077872 32.719932023307834 0.0 0.0 0.0 0 1.548455006504028 2.0 0.0 0.0 {[DA]|[EG]}{I|L}RA{I|L}Q 4.2204 - 121 1 1.465 73286.4 1.0 6295 4688 10973 HBL1_DMSO_200M_050219_2,10985 HBL1_DMSO_200M_050219_2,10985,LWNILSCCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 10986 59.335 128.0 599910.0 25 0 72956.0 + 6051 DSFEFKAHV 9 89 540.2614960066768 1078.5084390801535 2 540.2623168826103 MULTI CID FTMS 0 0 0 10973 269371.53125 0.0901652522324869 -2 0.2202835083007812 13 Unmodified _DSFEFKAHV_ ENSG00000101596|ENST00000320876|SMCHD1;nc|ENSG00000101596|A6NHR9-2|SMCHD1 64.9267550582149 0.0233543250187123 4 DS{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV 9 0 + 97.45 0.0 0.0 9.0357 9.0357 87.762 0.0 0.0 0.0 34.97302484056647 4.476664759506974 4.476664759506974 4.476664759506974 0 1.841129063296272 2.0 0.4247425010840047 0.0 + + DS{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV;DS{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAVH;DS{M(Oxidation (M))|F}EV[RP]MV;DS{M(Oxidation (M))|F}VE[RP]MV;[{M(Oxidation (M))|F}T][RP]VE[EC]V;[{M(Oxidation (M))|F}T][RP]EV[EC]V;[{M(Oxidation (M))|F}T][RP][YC(Carbamidomethyl (C))]HV 9.0357;8.6206;6.0919;5.4402;1.4499;0.79819;0.032649 +;-;-;-;-;-;- + 332 + 1 1.465 66063.1 1.0 6296 4688 10973 HBL1_DMSO_200M_050219_2,10986 HBL1_DMSO_200M_050219_2,10986,DSFEFKAHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10987 59.339 212.0 274000.0 25 0 32628.0 + 5119 VPYSVSNTVV 10 107 532.2821830158939 1062.5498130985875 2 532.7853271365166 MULTI CID FTMS 0 0 0 10973 242454.09375 0.9047630098301988 2 -0.2176170349121093 14 Unmodified _DIFAQRSQV_ ENSG00000178295|ENST00000381254|GEN1 12.531546534597751 0.4974689918368763 4 V 1 8 14.604 0.0 0.0 1.3744 0.0 0.0 945.4703052023948 0.0 945.4703052023948 0.0 3.345033904792878 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.3744 + + 396 + 1 1.465 55051.1 1.0 6297 4688 10973 HBL1_DMSO_200M_050219_2,10987 HBL1_DMSO_200M_050219_2,10987,DIFAQRSQV False False VPYSVSNTVV 59.339224 532.785327136517 2298018.75 10973.0 ENSG00000178295|ENST00000381254|GEN1 5.10344918568929 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10988 59.343 171.0 338120.0 25 0 39426.0 + 3572 DAAEFRVV 8 83 453.73714266889993 905.4597324046 2 453.7373840212822 MULTI CID FTMS 0 0 0 10973 238594.328125 0.8007283516509333 -1 0.1180953979492187 15 Unmodified _DAAEFRVV_ ENSG00000176658|ENST00000318217|MYO1D 39.957323273325 0.2350051964751539 4 {[DA]|[EG]}AE{M(Oxidation (M))|F}[RV]V 8 0 + 61.119 0.0 0.0 6.7501 6.7501 91.991 0.0 0.0 0.0 48.02046884880937 5.406075122407685 5.406075122407685 18.804562952784067 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + + {[DA]|[EG]}AE{M(Oxidation (M))|F}[RV]V;{[DA]|[EG]}A[VP]G[YT]{I|L};{[DA]|[EG]}A[RP][YT]{I|L};{[DA]|[EG]}A[VP][YT]AV;{[DA]|[EG]}A[VP][YT]G{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EE[RV]V 6.7501;4.6733;4.4848;4.2669;4.0724;0.27215 +;-;-;-;-;- + 80 + 1 1.465 55044.6 1.0 6298 4688 10973 HBL1_DMSO_200M_050219_2,10988 HBL1_DMSO_200M_050219_2,10988,DAAEFRVV False True DAAEFRVV 59.342559 453.737384021282 2252291.0 10973.0 ENSG00000176658|ENST00000318217|MYO1D 4.211114565531413 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10989 59.356 800.0 223100.0 25 0 17345.0 + 8224 EPYGKIKNYI 10 148 612.8348763234121 1223.655199713624 2 612.8351318240166 MULTI CID FTMS 0 0 0 10973 201520.109375 1.0 0 0.0 16 Unmodified _EPYGKIKNYI_ ENSG00000015479|ENST00000394805|MATR3;ENST00000415279.1_1_1:106435599-106436040:+|nuORF;ENST00000502422.5_1_5:138651717-138665081:+|nuORF;nc|ENSG00000280987|P43243-2|MATR3 88.95385435242217 0.009729780394035 4 EPYGK{I|L}KNY{I|L} 10 0 + 73.933 0.0 0.0 6.042 6.042 84.953 0.0 0.0 0.0 22.820917238671896 12.641368885835227 12.641368885835227 9.164539485499247 0 0.6421590589602533 1.3979400086720375 0.0 1.203119819790884 + + EPYGK{I|L}KNY{I|L};EPYGK{I|L}KGGY{I|L};[EP]{[DS]|[MA]|[CV]|TT}K{I|L}KN{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};EPYGK{I|L}K[TA]A{M(Oxidation (M))|F};[EP]{[DS]|[MA]|[CV]|TT}K{I|L}PQ[TP]{I|L};[YN]K{I|L}KGYPE{I|L};EPYGK{I|L}K{[VA]|[{I|L}G]}[YG];[EP]{[DS]|[MA]|[CV]|TT}K{I|L}KGG{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};EP{[TV]|[{I|L}S]}K{I|L}[HA]V[KC];[WQ]GGK{I|L}PQ[TP]{I|L} 6.042;5.293;3.8636;3.7096;3.6409;3.5949;3.4212;3.1146;3.0079;2.7557 +;-;-;-;-;-;-;-;-;- + 7862 + 1 1.465 135923.8 0.8899999856948853 6299 4688 10973 HBL1_DMSO_200M_050219_2,10989 HBL1_DMSO_200M_050219_2,10989,EPYGKIKNYI True True EPYGKIKNYI 59.356397 612.835131824017 1972656.625 10973.0 ENST00000502422.5_1_5:138651717-138665081:+|nuORF;;ENSG00000015479|ENST00000394805|MATR3;;nc|ENSG00000280987|P43243-2|MATR3;;ENST00000415279.1_1_1:106435599-106436040:+|nuORF 6.084393501281738 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10990 59.364 423.0 429320.0 25 0 45455.0 + 11040 GDAHIYLNHI 10 150 576.7934004485688 1151.5722479639376 2 576.7936889529228 MULTI CID FTMS 0 0 0 10973 199250.328125 0.2965120134602095 -2 0.2202835083007812 17 Unmodified _GDAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 114.20165948288296 0.0011420412450596 4 [DG]AH{I|L}Y{I|L}NH{I|L} 10 0 + 85.153 0.0 0.0 7.3945 7.3945 77.051 0.0 0.0 0.0 1.6537265805869907 0.2287874528033739 0.2287874528033739 0.2287874528033739 0 3.004432191740108 0.0 0.0 2.0986198691406326 + + [DG]AH{I|L}Y{I|L}NH{I|L};[DG]AH{I|L}Y{I|L}N{I|L}H;[HN]E{I|L}Y{I|L}NH{I|L};[HA][DG]{I|L}Y{I|L}NH{I|L};[H{I|L}]DQY{I|L}NH{I|L};[HN]E{I|L}Y{I|L}GGH{I|L};[DG]AH{I|L}{I|L}YNH{I|L};[DG]AH{I|L}{I|L}YN{I|L}H;[H{I|L}]NEY{I|L}NH{I|L};[HA]{I|L}[DG]Y{I|L}NH{I|L} 7.3945;7.3746;7.2509;7.0383;6.4666;6.4512;6.3988;6.3789;6.3465;6.0813 +;-;-;-;-;-;-;-;-;- + 3618 + 1 1.465 135671.9 1.0 6300 4688 10973 HBL1_DMSO_200M_050219_2,10990 HBL1_DMSO_200M_050219_2,10990,GDAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10991 59.367 177.0 405230.0 25 0 34057.0 + 37713 TLPTTSTF 8 116 434.2261461601246 866.4377393870492 2 434.2257568240166 MULTI CID FTMS 0 0 0 10973 180444.59375 0.6639041872379958 -1 0.1180953979492187 18 Unmodified _TLPTTSTF_ ENSG00000273604|ENST00000621654|EPOP 19.438996006549623 0.6237395211498085 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VP]{M(Oxidation (M))|F}T{M(Oxidation (M))|F} 7 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VP]{M(Oxidation (M))|F} + + 28.711 -8.1656 -1.3602 3.3137 3.3137 46.691 0.0 0.0 0.0 0.0 19.56268373957549 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VP]{M(Oxidation (M))|F}T{M(Oxidation (M))|F} 3.3137 - 66 + 1 1.465 58633.6 1.0 6301 4688 10973 HBL1_DMSO_200M_050219_2,10991 HBL1_DMSO_200M_050219_2,10991,TLPTTSTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10992 59.37 126.0 531260.0 25 0 64398.0 + 22005 LPPPPPGKL 9 98 458.2863737161545 914.558194499109 2 458.2859374880791 MULTI CID FTMS 0 0 0 10973 169030.0 0.9839041620417918 -1 0.1180953979492187 19 Unmodified _LPPPPPGKL_ ENST00000302472.3_1_5:40679945-40680071:+|nuORF 32.116972079565 0.1225432171549407 4 {I|L}N 2 8 28.093 0.0 0.0 3.0718 0.0 0.0 0.0 684.4085787408811 684.4085787408811 5.251369345785967 0.0 0.0 0.0 0 0.1595680409956017 0.8538719643217619 0.0 0.0 {I|L}N 3.0718 - 316 + 1 1.465 59371.8 1.0 6302 4688 10973 HBL1_DMSO_200M_050219_2,10992 HBL1_DMSO_200M_050219_2,10992,LPPPPPGKL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 10993 59.385 800.0 217460.0 25 0 15061.0 34698 SPTLKPSI 8 199 421.7515456767997 841.4885384203993 2 421.7513000369072 MULTI CID FTMS 0 0 0 10973 132101.109375 0.545230805384986 18 -1.7610092163085938 20 Unmodified _SPTLKPSI_ ENSG00000155966|ENST00000370460|AFF2;nc|ENSG00000155966|P51816-2|AFF2;nc|ENSG00000155966|P51816-3|AFF2;nc|ENSG00000155966|P51816-4|AFF2;nc|ENSG00000155966|P51816-5|AFF2;nc|ENSG00000155966|P51816-6|AFF2 26.88365393820708 0.4786498634179528 4 A{I|L}A[RV]T{I|L} 7 7 19.88 0.0 0.0 2.3625 0.0 0.0 99.02102240653058 0.0 99.02102240653058 0.0 8.319934904801396 0.0 0.0 0 0.0709991640913002 0.0 0.4134117563873403 0.0 A{I|L}A[RV]T{I|L} 2.3625 - 137 + 1 1.465 133932.9 0.5400000214576721 6303 4688 10973 HBL1_DMSO_200M_050219_2,10993 HBL1_DMSO_200M_050219_2,10993,SPTLKPSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10995 59.389 18.0 2741000.0 25 0 208870.0 + 22119 LPPPVQTQI 9 86 496.7926827535134 991.5708125738269 2 496.7927429080009 MULTI CID FTMS 0 0 0 10994 3052400.25 0.7645079995446614 7 -0.7339096069335938 1 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 64.23631603340823 0.0237365939569086 4 [{I|L}P]PPVQTQ{I|L} 9 0 + 58.131 0.0 0.0 5.8625 5.8625 74.746 0.0 0.0 0.0 23.750612633917 7.319845938712035 7.319845938712035 1.7609125905568137 0 1.1069758080123702 1.6989700043360187 0.5 0.0 + + [{I|L}P]PPVQTQ{I|L};[{I|L}P]PNP{I|L}TQ{I|L};[{I|L}P]PPN{I|L}TQ{I|L};[{I|L}P]NPP{I|L}TQ{I|L};[{I|L}P]PPV[AG]TQ{I|L};[{I|L}P]PGGP{I|L}TQ{I|L};[{I|L}P]PPGG{I|L}TQ{I|L};[{I|L}P]GGPP{I|L}TQ{I|L};[{I|L}P]PP[KA]EQ{I|L};[VP]PP{I|L}QTQ{I|L} 5.8625;5.685;5.559;5.2038;4.9339;4.7563;4.6303;4.2751;3.6804;3.4673 +;-;-;-;-;-;-;-;-;- + 756 1 1.465 45041.1 1.0 6304 4689 10994 HBL1_DMSO_200M_050219_2,10995 HBL1_DMSO_200M_050219_2,10995,LPPPVQTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10996 59.392 142.0 575950.0 25 0 68623.0 + 21802 LPNHRVLIM 9 96 364.883451039952 1091.628523720056 3 364.8831970095634 MULTI CID FTMS 0 0 0 10994 247565.390625 0.3328011811321325 2 -0.2512474060058594 2 Unmodified _LPNHRVLIM_ ENSG00000114779|ENST00000361143|ABHD14B;ENST00000461108.5_1_3:52003444-52003858:-|nuORF;ENST00000487005.1_1_3:52003444-52008077:-|nuORF;nc|ENSG00000114779|Q96IU4-2|ABHD14B 23.1484247019978 0.2366544122328345 4 {I|L}[QT]{I|L}{I|L}M 6 5 20.557 0.0 0.0 1.8832 0.0 0.0 374.2279835431656 0.0 374.2279835431656 0.0 5.072580688874744 0.0 0.0 0 0.5579021467263782 0.0 0.0 0.3807196863200844 {I|L}[QT]{I|L}{I|L}M 1.8832 - 106 1 1.465 71256.3 1.0 6305 4689 10994 HBL1_DMSO_200M_050219_2,10996 HBL1_DMSO_200M_050219_2,10996,LPNHRVLIM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10997 59.394 69.0 888420.0 25 0 146080.0 + 9337 FILANEHNV 9 84 528.7769338764687 0 528.7786743044853 PEAK CID FTMS 0 0 0 10994 656381.0 1.0 0 0.0 3 Unmodified _FILANEHNV_ ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5 34.40172386719151 0.0892392376003579 4 {I|L}ANE 4 5 31.714 0.0 0.0 3.0046 0.0 0.0 260.15174516679195 365.15841255065095 625.310157717443 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.7742275032520141 + {I|L}ANE 3.0046 + + 98 + 1 1.465 52539.8 1.0 6306 4689 10994 HBL1_DMSO_200M_050219_2,10997 HBL1_DMSO_200M_050219_2,10997,FILANEHNV True True FILANEHNV 59.393961 528.778674304485 2599752.75 10994.0 ENSG00000065150|ENST00000651721|IPO5;;nc|ENSG00000065150|O00410-3|IPO5;;nc|ENSG00000065150|O00410-2|IPO5 7.0278317133585615 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10998 59.396 64.0 1021100.0 25 0 98314.0 28648 PVKTEVPL 8 91 441.7683182352048 881.5220835372097 2 441.7689086794853 MULTI CID FTMS 0 0 0 10994 644744.0 0.7234212110812106 -15 1.6654319763183594 4 Unmodified _PVKTEVPL_ ENSG00000172403|ENST00000307142|SYNPO2;nc|ENSG00000172403|Q9UMS6-3|SYNPO2;nc|ENSG00000172403|Q9UMS6-4|SYNPO2;nc|ENSG00000172403|Q9UMS6|SYNPO2 21.74664581756881 0.5868176546531598 4 VPC{I|L}V 5 6 58.271 0.0 0.0 6.6103 0.0 0.0 0.0 367.2085054986938 367.2085054986938 38.87340949395068 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 VPC{I|L}V 6.6103 - 167 + 1 1.465 52686.7 1.0 6307 4689 10994 HBL1_DMSO_200M_050219_2,10998 HBL1_DMSO_200M_050219_2,10998,PVKTEVPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 10999 59.398 113.0 595820.0 25 0 57523.0 + 11042 GDAHIYLNHI 10 96 384.8647133168943 1151.5723105508828 3 384.8646423220634 MULTI CID FTMS 0 0 0 10994 453921.0625 0.7216459289865947 -1 0.081939697265625 5 Unmodified _GDAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 65.23502041540118 0.0228537820337083 4 {[QD]|[EN]|[WG]|[KD]|[RS]}H{I|L}Y{I|L}N[H{I|L}] 9 2 + 61.616 0.0 0.0 5.3506 5.3506 84.614 0.0 0.0 0.0 24.636153375280188 7.147642715192504 7.147642715192504 11.237125054200234 0 0.6505149978319906 0.0 0.0 1.6237125054200234 {[QD]|[EN]|[WG]|[KD]|[RS]}H{I|L}Y{I|L}N[H{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}H{I|L}{I|L}YN[H{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}H{I|L}Y{I|L}GG[H{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}H{I|L}{I|L}[HS][R{M(Oxidation (M))|F}];{[QD]|[EN]|[WG]|[KD]|[RS]}H{I|L}{I|L}YGG[H{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}[PG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}N[H{I|L}] 5.3506;4.3748;3.141;3.1092;2.534;1.6202 -;-;-;-;-;- 317 + 1 1.465 59519.0 1.0 6308 4689 10994 HBL1_DMSO_200M_050219_2,10999 HBL1_DMSO_200M_050219_2,10999,GDAHIYLNHI True True GDAHIYLNHI 59.397878 384.864642322063 14471456.0 10994.0 ENSG00000176890|ENST00000323274|TYMS;;nc|ENSG00000176890|P04818-3|TYMS;;chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;;nc|ENSG00000176890|P04818-2|TYMS;;ENST00000581920.1_1_18:667730-672994:+|nuORF 6.719199816385905 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11000 59.4 99.0 700150.0 25 0 42126.0 + 44996 YPSLPAQQV 9 103 501.766141568671 1001.517730204142 2 501.7664977908134 MULTI CID FTMS 0 0 0 10994 354872.65625 0.4490121154201252 4 -0.4502754211425781 6 Unmodified _YPSLPAQQV_ ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF 50.855029805455786 0.0384952370514206 4 [AG]VSQVS 7 8 29.742 0.0 0.0 2.9697 0.0 0.0 0.0 370.17227758371 370.17227758371 10.812254316809526 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.75 0.0 [AG]VSQVS 2.9697 - 492 1 1.465 60278.5 1.0 6309 4689 10994 HBL1_DMSO_200M_050219_2,11000 HBL1_DMSO_200M_050219_2,11000,YPSLPAQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11001 59.403 137.0 321480.0 25 0 25297.0 + 43165 VYQTYVNAM 9 91 544.758451874158 1087.502350815116 2 544.7582885622978 MULTI CID FTMS 0 0 0 10994 351272.6875 0.2721507439549394 -2 0.2000350952148437 7 Unmodified _VYQTYVNAM_ ENSG00000119203|ENST00000238112|CPSF3 46.020951573049366 0.0490941689151868 4 [YV]TQYV[C(Carbamidomethyl (C))R] 8 5 + 50.653 0.0 0.0 4.6577 4.6577 66.689 0.0 0.0 0.0 6.020599913279625 5.484550065040281 5.484550065040281 0.2422750325201406 0 0.0 2.0 1.325257498915995 0.4247425010840047 [YV]TQYV[C(Carbamidomethyl (C))R];[YV]QTYV[C(Carbamidomethyl (C))R];[YR]NYQT{I|L}M;[YR]NYTQ{I|L}M;[YR]NYTVAAM;[YR]NYVTAAM;[YT]VQYV[C(Carbamidomethyl (C))R];[YV]T[AG]YV[C(Carbamidomethyl (C))R];[YV][AG]TYV[C(Carbamidomethyl (C))R];[YR]GGYQT{I|L}M 4.6577;4.6355;4.1041;4.0818;4.0102;3.6447;3.5505;3.4155;3.3932;3.2524 -;-;-;-;-;-;-;-;-;- 894 1 1.465 39305.6 1.0 6310 4689 10994 HBL1_DMSO_200M_050219_2,11001 HBL1_DMSO_200M_050219_2,11001,VYQTYVNAM True True VYQTYVNAM 59.402774 544.758288562298 21315976.0 10994.0 ENSG00000119203|ENST00000238112|CPSF3 8.0987499554952 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11002 59.406 156.0 661290.0 25 0 82262.0 + 22523 LPWEEREKI 9 87 600.3248222133889 1198.6350914935776 2 600.3253051638603 MULTI CID FTMS 0 0 0 10994 331272.0 0.316904595391425 -1 0.081939697265625 8 Unmodified _LPWEEREKI_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 37.77132515983256 0.0876909340306915 4 {I|L}PWEE{[RE]|[WV]}K{I|L} 9 0 + 79.057 0.0 0.0 6.5956 6.5956 92.405 0.0 0.0 0.0 47.43209182939839 1.608698242187799 1.608698242187799 30.071783151536053 0 1.524227503252014 2.0 0.8494850021680094 0.0 + + {I|L}PWEE{[RE]|[WV]}K{I|L};[{I|L}P]WE[WD]K{I|L}{I|L};[WP]E{I|L}[WD]K{I|L}{I|L};[WP]{I|L}E[WD]K{I|L}{I|L};{I|L}P{I|L}[Y{I|L}]RC(Carbamidomethyl (C))[HQ];[{I|L}P]W{[HG]|PP}GH[WP]{I|L};[{I|L}P]W{[HG]|PP}GE[YK]{I|L};[{I|L}P]W{[HG]|PP}W[YK]{I|L};[Q{I|L}]VC{NN|[MP]|[D{I|L}]|[EV]}WP{I|L}{I|L};[WP]{I|L}{[HG]|PP}GH[WP]{I|L} 6.5956;4.0868;3.5845;3.4185;3.3393;3.2568;3.1099;2.963;2.8424;2.5885 +;-;-;-;-;-;-;-;-;- + 589 + 1 1.465 78385.5 1.0 6311 4689 10994 HBL1_DMSO_200M_050219_2,11002 HBL1_DMSO_200M_050219_2,11002,LPWEEREKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11003 59.411 266.0 339150.0 25 0 51914.0 28102 PPLPPPLPA 9 109 449.7732923312103 897.5320317292206 2 449.7727844119072 MULTI CID FTMS 0 0 0 10994 260060.9375 0.3113642730958699 -13 1.4552040100097656 9 Unmodified _PPLPPPLPA_ ENSG00000116035|ENST00000234392|VAX2 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP{I|L}[PA] 9 2 + 59.319 0.0 0.0 6.6092 6.6092 90.496 0.0 0.0 0.0 3.881580146315784 46.555052735089326 3.881580146315784 13.65279269351241 0 1.1237125054200234 1.5228787452803376 0.0 0.0 [{I|L}P]PPPP{I|L}[PA];[VS]{I|L}P{I|L}[RD]V;[VS]{I|L}P{I|L}[W{I|L}]A;[VS]{I|L}P{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[{I|L}P][YK]P{I|L}[PA];{[HG]|PP}{I|L}PPP{I|L}[PA];[{I|L}P]P[YK]{I|L}[PA];{[HG]|PP}{I|L}[YK]{I|L}[PA] 6.6092;5.088;4.9664;4.6587;4.4151;4.1336;3.271;0.79552 -;-;-;-;-;+;-;- + 201 1 1.465 72536.5 1.0 6312 4689 10994 HBL1_DMSO_200M_050219_2,11003 HBL1_DMSO_200M_050219_2,11003,PPLPPPLPA True False PLPPPPLPA 59.410786 449.773 0.0 10994.0 ENSG00000100379|ENST00000403888|KCTD17 -0.4668026516834895 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11004 59.424 780.0 375550.0 25 0 20896.0 + 31861 RTIEDLDENQL 11 158 673.3339766953221 1344.653400457444 2 673.3349487185478 MULTI CID FTMS 0 0 0 10994 255450.4375 1.0 0 0.0 10 Unmodified _RTIEDLDENQL_ ENSG00000146476|ENST00000367294|ARMT1 51.487983226225225 0.1093896055713593 4 {NN|[MP]|[D{I|L}]|[EV]}TVAD{I|L}DENQ{I|L} 12 4 + 105.33 0.0 0.0 7.8334 7.8334 81.391 0.0 0.0 0.0 5.0565842292838425 16.611814434466183 5.0565842292838425 1.8406018872695569 0 0.0 1.3010299956639813 2.3723637474483468 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}TVAD{I|L}DENQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TVW{I|L}DENQ{I|L};{I|L}{I|L}DSAD{I|L}DENQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}GD{I|L}DENQ{I|L};{I|L}{I|L}DSW{I|L}DENQ{I|L};{[TV]|[{I|L}S]}EVAD{I|L}DENQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TVAD{I|L}DEN[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}TVAD{I|L}DEGGQ{I|L};{I|L}{I|L}VEC(Carbamidomethyl (C)){I|L}DENQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}SAD{I|L}DENQ{I|L} 7.8334;7.6966;7.4574;7.3549;7.3205;7.1618;7.1568;7.1568;7.0757;7.0305 -;-;-;-;-;-;-;-;-;- 7385 1 1.465 211618.0 1.0 6313 4689 10994 HBL1_DMSO_200M_050219_2,11004 HBL1_DMSO_200M_050219_2,11004,RTIEDLDENQL True True RTIEDLDENQL 59.424288 673.334948718548 1515909.875 10994.0 ENSG00000146476|ENST00000367294|ARMT1 4.893087069193522 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11005 59.432 424.0 258570.0 25 0 24240.0 + 18480 VVAEDPAGLKV 11 125 548.8115914670116 1095.608630000823 2 549.3134643435478 MULTI CID FTMS 0 0 0 10994 188927.90625 0.6522761233885124 -2 0.2000350952148437 11 Unmodified _KYLFLIYH_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 10.183394434864962 0.7604730176254005 4 VVA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{M(Oxidation (M))|F}Y 8 6 26.666 0.0 0.0 2.4339 0.0 0.0 0.0 125.07131245615427 125.07131245615427 -2.5667640352072425 0.0 -2.5667640352072425 0.0 0 0.6989700043360187 2.0 0.0 0.0 VVA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{M(Oxidation (M))|F}Y 2.4339 - 774 1 1.465 94775.9 1.0 6314 4689 10994 HBL1_DMSO_200M_050219_2,11005 HBL1_DMSO_200M_050219_2,11005,KYLFLIYH False False VVAEDPAGLKV 59.431848 549.313464343548 3113463.75 10994.0 ENSG00000116830|ENST00000369466|TTF2;;nc|ENSG00000116830|Q9UNY4-2|TTF2 7.8911026318868 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11006 59.446 800.0 287090.0 25 0 31246.0 + + 28878 TVIEDKKIEL 10 157 593.8442213379927 1185.6738897427854 2 594.3473998904228 MULTI CID FTMS 0 0 0 10994 146942.21875 0.4710247916167893 -5 0.5693550109863281 12 Unmodified _QALTSLCPLKL_ ENSG00000196652|ENST00000326775|ZKSCAN5 27.22323531849824 0.4529927607131788 4 {[QN]|[E{I|L}]|[KN]}DKK{I|L}{M(Oxidation (M))|F}{I|L}S 9 -1 65.474 0.0 0.0 5.5221 0.0 0.0 0.0 109.04986029371426 109.04986029371426 30.548533727635125 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.9361818737241727 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}DKK{I|L}{M(Oxidation (M))|F}{I|L}S 5.5221 - 3749 1 1.465 169529.2 0.7900000214576721 6315 4689 10994 HBL1_DMSO_200M_050219_2,11006 HBL1_DMSO_200M_050219_2,11006,QALTSLCPLKL False False TVIEDKKIEL 59.44568 594.347399890423 5705145.5 10994.0 ENSG00000196652|ENST00000326775|ZKSCAN5 5.638689200083415 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11007 59.46 800.0 378520.0 25 0 94692.0 + -1 GCTFNEMCGWY 11 114 720.7538540289593 1439.4931551247184 2 720.7551147341728 MULTI CID FTMS 0 0 0 10994 136507.46875 0.5013033978546353 -1 0.081939697265625 13 2 Carbamidomethyl (C),Oxidation (M) _GC(Carbamidomethyl (C))TFNEM(Oxidation (M))C(Carbamidomethyl (C))GWY_ REV__ENST00000496961.5_1_1:110040563-110040815:+|nuORF 0.3506318815782774 0.8734936314171269 4 [{I|L}A]TAQAKT 8 -1 36.266 0.0 0.0 2.5193 0.0 0.0 0.0 652.0408595527059 652.0408595527059 23.7753712075382 0.0 0.0 0.0 0 0.0 0.6020599913279624 1.4124379954164592 0.25 [{I|L}A]TAQAKT 2.5193 - 704 1 1.465 210456.4 0.7699999809265137 6316 4689 10994 HBL1_DMSO_200M_050219_2,11007 HBL1_DMSO_200M_050219_2,11007,GCTFNEMCGWY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11008 59.474 800.0 154340.0 25 0 6877.8 + 23639 LTQPLALQNRL 11 164 422.92274520352873 1265.7464062107863 3 422.9227477908134 MULTI CID FTMS 0 0 0 10994 122379.2265625 0.9913042383184204 1 -0.1356773376464843 14 Unmodified _LTQPLALQNRL_ REV__nc|ENSG00000150510|Q86V42-3|FAM124A 15.538449434065043 0.7119291465483839 4 [PS]{I|L}P{I|L}{[RE]|[WV]}{I|L}QT{I|L} 11 -1 + 64.593 0.0 0.0 5.1031 5.1031 71.043 0.0 0.0 0.0 1.5482466278869822 16.575773191777927 1.5482466278869822 1.5482466278869822 0 0.9247425010840048 1.0457574905606752 0.4947026752325154 0.0 [PS]{I|L}P{I|L}{[RE]|[WV]}{I|L}QT{I|L};[{I|L}P]SP{I|L}{[RE]|[WV]}{I|L}QT{I|L};[{I|L}P][{I|L}V]WSP{I|L}QT{I|L};[PS]{I|L}P{I|L}{[RE]|[WV]}{I|L}[AG]T{I|L};[{I|L}P]SP{I|L}{[RE]|[WV]}{I|L}[AG]T{I|L};[{I|L}P][{I|L}V]WSP{I|L}[AG]T{I|L};[PS]{I|L}[VS]TR[{I|L}P]SP{I|L};[{I|L}P]S[VS]TR[{I|L}P]SP{I|L};[PS]{I|L}[VS]RPS[{I|L}P]T{I|L};[VP]TP{I|L}{[RE]|[WV]}{I|L}QT{I|L} 5.1031;4.9808;4.6761;4.3819;4.2596;3.9549;3.6663;3.544;3.3762;3.3719 -;-;-;-;-;-;-;-;-;- 2382 1 1.465 104354.2 0.5299999713897705 6317 4689 10994 HBL1_DMSO_200M_050219_2,11008 HBL1_DMSO_200M_050219_2,11008,LTQPLALQNRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11009 59.488 800.0 192700.0 25 0 68764.0 + 44992 YPSGGLEV 8 85 821.4036564423665 820.3963799757664 1 821.4064208865166 MULTI CID FTMS 0 0 0 10994 117365.546875 0.6240662553856221 -2 0.2000350952148437 15 Unmodified _YPSGGLEV_ ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272047-33272452:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP 89.42679046578446 0.050933533736698 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SGG{I|L}EV 8 0 + 77.402 0.0 0.0 9.4347 9.4347 89.991 0.0 0.0 0.0 10.805300040193018 16.40978057358332 10.805300040193018 6.141755649463647 0 0.5796896906561032 1.6989700043360187 0.9489700043360187 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SGG{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SN{I|L}EV;V{M(Oxidation (M))|F}{I|L}GGS{[QN]|[E{I|L}]|[KN]};V{M(Oxidation (M))|F}{I|L}NS{[QN]|[E{I|L}]|[KN]};V{M(Oxidation (M))|F}{I|L}GGN{[QS]|[NT]};YPRGS{[QN]|[E{I|L}]|[KN]};YPRGN{[QS]|[NT]};V{M(Oxidation (M))|F}{I|L}NN{[QS]|[NT]};V{M(Oxidation (M))|F}{I|L}GGGG{[QS]|[NT]};YPRGGG{[QS]|[NT]} 9.4347;8.6861;8.1176;7.369;6.7968;6.5723;6.2333;6.0482;5.6678;5.096 +;-;-;-;-;-;-;-;-;- + 390 1 1.465 113534.4 0.7099999785423279 6318 4689 10994 HBL1_DMSO_200M_050219_2,11009 HBL1_DMSO_200M_050219_2,11009,YPSGGLEV True True YPSGGLEV 59.488348 821.406420886517 2676067.75 10994.0 ENST00000480730.5_1_6:33272047-33272452:-|nuORF;;nc|ENSG00000231925|O15533-4|TAPBP;;nc|ENSG00000231925|O15533-3|TAPBP;;nc|ENSG00000231925|O15533-2|TAPBP;;ENSG00000231925|ENST00000434618|TAPBP 5.742953777313232 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11010 59.493 185.0 354970.0 25 0 26353.0 + 21514 LPIHPRQH 8 93 499.2875991042045 996.560645275209 2 499.2865173220634 MULTI CID FTMS 0 0 0 10994 113484.9296875 0.0492920032052743 6 -0.6536293029785156 16 Unmodified _LPIHPRQH_ REV__ENSG00000115661|ENST00000396738|STK16 19.438996006549623 0.6237395211498085 4 {I|L}PE 3 -1 45.956 0.0 0.0 4.6114 0.0 0.0 0.0 654.3587099123606 654.3587099123606 23.764100213633768 0.0 0.0 0.0 0 0.6747425010840047 1.3010299956639813 0.0 0.0 {I|L}PE 4.6114 - 105 + 1 1.465 54011.8 1.0 6319 4689 10994 HBL1_DMSO_200M_050219_2,11010 HBL1_DMSO_200M_050219_2,11010,LPIHPRQH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11011 59.507 800.0 280320.0 25 0 13482.0 11364 GGAKRGGG 8 153 659.3612267077392 658.3539502411392 1 659.3611328005791 MULTI CID FTMS 0 0 0 10994 92961.859375 0.3893981983991472 4 -0.4502754211425781 17 Unmodified _GGAKRGGG_ ENST00000552360.3_1_19:47777847-47777964:+|nuORF 0.6903765706972694 0.8201419426409876 4 {I|L}A{I|L}DVE 6 7 + 69.79 0.0 0.0 10.601 10.601 87.941 0.0 0.0 0.0 4.071820399085624 4.071820399085624 4.071820399085624 4.071820399085624 0 1.8807196863200843 1.3010299956639813 1.159757029068516 0.0 {I|L}A{I|L}DVE;[{I|L}A]D{I|L}VE;[{I|L}A]{I|L}DVE;{I|L}D{I|L}AVE;{I|L}A{I|L}DD{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}VE;[{I|L}A]D{I|L}D{I|L};[{I|L}A]{I|L}DD{I|L};{I|L}D{I|L}AD{I|L};[{I|L}A]DV{I|L}E 10.601;9.9822;9.7516;9.7437;9.5003;9.4876;8.8866;8.6559;8.6433;8.4633 -;-;-;-;-;-;-;-;-;- 352 + 1 1.465 164246.0 0.6600000262260437 6320 4689 10994 HBL1_DMSO_200M_050219_2,11011 HBL1_DMSO_200M_050219_2,11011,GGAKRGGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11012 59.521 800.0 130310.0 25 0 4228.7 + 3447 CDTTVPDIFYN 11 131 644.2816048951267 0 644.2809326052666 PEAK CID FTMS 0 0 0 10994 95306.9140625 1.0 0 0.0 18 Unmodified _CDTTVPDIFYN_ REV__ENSG00000214891|ENST00000617704|TRIM64C 8.745405648335112 0.4618489994582195 4 GS{I|L}H 4 -1 17.665 0.0 0.0 1.3731 0.0 0.0 316.14903179472554 573.1910717605102 889.3401035552358 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 GS{I|L}H 1.3731 - 151 + 1 1.465 82026.1 0.6700000166893005 6321 4689 10994 HBL1_DMSO_200M_050219_2,11012 HBL1_DMSO_200M_050219_2,11012,CDTTVPDIFYN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11014 59.527 119.0 608190.0 25 0 81483.0 + 26547 NVIPSVTRV 9 97 492.79571356597575 983.5768741987516 2 492.7954894900322 MULTI CID FTMS 0 0 0 11013 408775.5625 0.714445869362894 1 -0.115570068359375 1 Unmodified _NVIPSVTRV_ ENSG00000125871|ENST00000377710|MGME1;ENST00000467391.1_1_20:17950715-17968822:+|nuORF 29.84058131909904 0.1515068451768857 4 {[VA]|[{I|L}G]}P[YK]V{I|L} 7 7 33.421 0.0 0.0 3.3979 0.0 0.0 0.0 210.0865383261568 210.0865383261568 22.161947364299728 0.0 0.0 0.0 0 1.0 1.2218487496163564 0.0 0.4247425010840047 {[VA]|[{I|L}G]}P[YK]V{I|L} 3.3979 - 155 1 1.464 62859.0 1.0 6322 4690 11013 HBL1_DMSO_200M_050219_2,11014 HBL1_DMSO_200M_050219_2,11014,NVIPSVTRV False True NVIPSVTRV 59.526698 492.795489490032 8677191.0 11013.0 ENSG00000125871|ENST00000377710|MGME1;;ENST00000467391.1_1_20:17950715-17968822:+|nuORF 5.7619584401448565 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11015 59.537 559.0 197000.0 25 0 7091.5 + 32177 RVVAEELENV 10 164 579.3119363796615 1156.6093198261228 2 579.3122436404228 MULTI CID FTMS 0 0 0 11013 91563.0 0.1587260553843646 2 -0.1805801391601562 2 Unmodified _RVVAEELENV_ ENSG00000167196|ENST00000308275|FBXO22;nc|ENSG00000167196|Q8NEZ5-3|FBXO22 32.037481411007896 0.2488723560272515 4 E{I|L}ENV 5 5 38.544 0.0 0.0 3.3325 0.0 0.0 554.3168497015656 0.0 554.3168497015656 0.0 18.111206103324733 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3494850021680094 + E{I|L}ENV 3.3325 + + 620 1 1.464 84947.2 1.0 6323 4690 11013 HBL1_DMSO_200M_050219_2,11015 HBL1_DMSO_200M_050219_2,11015,RVVAEELENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11016 59.538 50.0 1313900.0 25 0 323670.0 + 36985 TFISSGRSL 9 73 484.26501871175697 966.515484490314 2 484.2643005251884 MULTI CID FTMS 0 0 0 11013 1121732.0 0.3258670311904127 -2 0.2176170349121093 3 Unmodified _TFISSGRSL_ ENSG00000138658|ENST00000505019|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-4|ZGRF1;nc|ENSG00000138658|Q86YA3-5|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1 36.12702656103203 0.0967173616627612 4 T{M(Oxidation (M))|F}AS 4 6 34.412 0.0 0.0 3.5605 0.0 0.0 0.0 557.3066500299436 557.3066500299436 20.43305028184122 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}AS 3.5605 - 45 + 1 1.464 55827.5 1.0 6324 4690 11013 HBL1_DMSO_200M_050219_2,11016 HBL1_DMSO_200M_050219_2,11016,TFISSGRSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11017 59.539 53.0 1163200.0 25 0 140010.0 + 27309 PHNQFIKMM 9 94 382.5247055208697 1144.552287162809 3 382.5245239138603 MULTI CID FTMS 0 0 0 11013 810519.0 0.5485232474420543 -2 0.2176170349121093 4 Unmodified _PHNQFIKMM_ ENSG00000162511|ENST00000294507|LAPTM5 23.1484247019978 0.2366544122328345 4 MPHA{I|L} 5 7 31.938 0.0 0.0 2.7905 0.0 0.0 0.0 592.2660616510374 592.2660616510374 14.16000644387189 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MPHA{I|L} 2.7905 - 300 + 1 1.464 55668.2 1.0 6325 4690 11013 HBL1_DMSO_200M_050219_2,11017 HBL1_DMSO_200M_050219_2,11017,PHNQFIKMM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11018 59.542 123.0 846450.0 25 0 80199.0 + 15500 IPTKDVPIV 9 102 491.3025895665872 980.5906261999744 2 491.3025695681572 MULTI CID FTMS 0 0 0 11013 766666.875 0.6894638966263079 -1 0.1356773376464843 5 Unmodified _IPTKDVPIV_ ENSG00000159023|ENST00000343067|EPB41;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41 36.506200033944 0.094635877243972 4 {I|L}P 2 7 39.196 0.0 0.0 3.9972 0.0 0.0 0.0 767.4274996393186 767.4274996393186 1.852875112906176 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + {I|L}P 3.9972 + + 535 + 1 1.464 81898.7 1.0 6326 4690 11013 HBL1_DMSO_200M_050219_2,11018 HBL1_DMSO_200M_050219_2,11018,IPTKDVPIV True True IPTKDVPIV 59.54171 491.302569568157 10255971.0 11013.0 nc|ENSG00000159023|P11171-5|EPB41;;nc|ENSG00000159023|P11171-2|EPB41;;ENSG00000159023|ENST00000343067|EPB41;;nc|ENSG00000159023|P11171-3|EPB41;;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;;nc|ENSG00000159023|P11171-4|EPB41;;nc|ENSG00000159023|P11171-6|EPB41 2.112605571746826 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11019 59.544 80.0 821740.0 25 0 57207.0 + 6053 DSFEFKAHV 9 118 360.5098032814404 1078.5075804445212 3 360.5099670290947 MULTI CID FTMS 0 0 0 11013 571278.3125 1.0 0 0.0 6 Unmodified _DSFEFKAHV_ ENSG00000101596|ENST00000320876|SMCHD1;nc|ENSG00000101596|A6NHR9-2|SMCHD1 22.65808497894818 0.2428932432760099 4 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV 9 0 + 44.152 0.0 0.0 4.0938 4.0938 69.258 0.0 0.0 0.0 7.147642715192497 2.7620641193894926 2.7620641193894926 2.7620641193894926 0 0.1861818737241735 0.0 0.5 0.0 + + {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAVH;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KG{I|L}H 4.0938;3.8377;3.5586 +;-;- + 127 + 1 1.464 58958.1 1.0 6327 4690 11013 HBL1_DMSO_200M_050219_2,11019 HBL1_DMSO_200M_050219_2,11019,DSFEFKAHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11020 59.545 72.0 755130.0 25 0 88249.0 -1 CSAVMGCFL 9 90 502.204718249506 1002.394883565812 2 502.2044250369072 MULTI CID FTMS 0 0 0 11013 524568.1875 1.0 0 0.0 7 Carbamidomethyl (C),Oxidation (M) _CSAVM(Oxidation (M))GC(Carbamidomethyl (C))FL_ ENST00000536398.5_1_12:109927798-109928349:+|nuORF 18.13498045792455 0.3457906370836843 4 E{M(Oxidation (M))|F}C(Carbamidomethyl (C))G{I|L} 5 -1 20.578 0.0 0.0 2.0529 0.0 0.0 378.1309808331932 0.0 378.1309808331932 0.0 8.588126006703476 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 E{M(Oxidation (M))|F}C(Carbamidomethyl (C))G{I|L} 2.0529 - 91 + 1 1.464 46870.5 1.0 6328 4690 11013 HBL1_DMSO_200M_050219_2,11020 HBL1_DMSO_200M_050219_2,11020,CSAVMGCFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11021 59.548 125.0 679140.0 25 0 67111.0 + 2032 AAADKIPGL 9 99 428.24815837719166 854.4817638211833 2 428.2492248415947 MULTI CID FTMS 0 0 0 11013 489944.3125 0.848867791356634 -1 0.1356773376464843 8 Unmodified _APGRGKRGG_ ENSG00000124207|ENST00000262982|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L 4.75600775471527 0.7486543447549536 4 AATA{I|L}AA 7 8 62.739 0.0 0.0 7.3423 0.0 0.0 0.0 282.1397587765146 282.1397587765146 39.29769952620511 0.0 0.0 0.0 0 0.8252574989159953 2.0 1.3807196863200843 0.0 AATA{I|L}AA 7.3423 - 326 1 1.464 72343.2 1.0 6329 4690 11013 HBL1_DMSO_200M_050219_2,11021 HBL1_DMSO_200M_050219_2,11021,APGRGKRGG False False AAADKIPGL 59.54776 428.249224841595 6695611.5 11013.0 ENSG00000124207|ENST00000262982|CSE1L;;nc|ENSG00000124207|P55060-4|CSE1L;;nc|ENSG00000124207|P55060-3|CSE1L 6.163147608439128 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11022 59.55 134.0 696980.0 25 0 94084.0 + 3111 AVPEAIPTP 9 100 447.75044256629127 893.4863321993826 2 447.7503234744072 MULTI CID FTMS 0 0 0 11013 413054.125 0.8633034639169979 -1 0.1356773376464843 9 Unmodified _AVPEAIPTP_ ENSG00000171222|ENST00000305978|SCAND1 30.22481116460888 0.1466181017706357 4 [EP]A{I|L}PTP{[VA]|[{I|L}G]} 9 4 + 54.587 0.0 0.0 6.1095 6.1095 87.297 0.0 0.0 0.0 15.17020498371508 25.290456128172 15.17020498371508 9.842757820673016 0 0.0 2.0 0.3494850021680094 0.0 [EP]A{I|L}PTP{[VA]|[{I|L}G]};[EP]A[TP]{I|L}P{[VA]|[{I|L}G]};[TP]P{[CP]|[EA]}{I|L}P{[VA]|[{I|L}G]};[HA]{[WT]|[RM]}{I|L}P{[VA]|[{I|L}G]};[{I|L}P]{[CP]|[EA]}PTP{[VA]|[{I|L}G]};[TP][{I|L}A][EP]P{[VA]|[{I|L}G]};[{I|L}P][TA][EP]P{[VA]|[{I|L}G]} 6.1095;5.0079;4.334;2.8267;2.4975;2.2492;0.73583 -;-;-;-;-;-;- 159 1 1.464 77606.6 1.0 6330 4690 11013 HBL1_DMSO_200M_050219_2,11022 HBL1_DMSO_200M_050219_2,11022,AVPEAIPTP False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11023 59.554 176.0 541730.0 25 0 45079.0 + 4967 DGPRVFRVV 9 105 348.8697307252797 1043.587362776039 3 348.8697387576103 MULTI CID FTMS 0 0 0 11013 354442.21875 0.6182400854513943 -1 0.1356773376464843 10 Unmodified _DGPRVFRVV_ ENSG00000179115|ENST00000314606|FARSA;ENST00000592662.5_1_19:13039347-13044510:-|nuORF;nc|ENSG00000179115|Q9Y285-2|FARSA 54.773552608820026 0.0299037012502309 4 DGPRV{M(Oxidation (M))|F}RVV 9 0 + 77.846 0.0 0.0 7.4595 7.4595 90.651 0.0 0.0 0.0 65.62768470941307 8.34553029807644 8.34553029807644 9.208187539523747 0 0.3494850021680094 1.6989700043360187 0.0 0.6549471895720984 + + DGPRV{M(Oxidation (M))|F}RVV;DGP[VG]V{M(Oxidation (M))|F}RVV;DGV[PG]V{M(Oxidation (M))|F}RVV;DGVV[PG]{M(Oxidation (M))|F}RVV;DGV[RP]{M(Oxidation (M))|F}RVV;DGVVV{I|L}[RV]{[MG]|[TS]};DGVVV{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}C;DVGV[PG]{M(Oxidation (M))|F}RVV;DVG[PG]V{M(Oxidation (M))|F}RVV;DRV[PG]{M(Oxidation (M))|F}RVV 7.4595;6.5771;6.5729;6.5729;5.9469;4.7382;4.6082;3.8179;3.8179;3.6492 +;-;-;-;-;-;-;-;-;- + 273 + 1 1.464 86743.3 1.0 6331 4690 11013 HBL1_DMSO_200M_050219_2,11023 HBL1_DMSO_200M_050219_2,11023,DGPRVFRVV True True DGPRVFRVV 59.553881 348.86973875761 4428491.0 11013.0 ENST00000592662.5_1_19:13039347-13044510:-|nuORF;;ENSG00000179115|ENST00000314606|FARSA;;nc|ENSG00000179115|Q9Y285-2|FARSA 4.339378118515015 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11024 59.559 266.0 569780.0 25 0 78535.0 -1 0 129 466.2659961766482 465.2587197100482 1 466.2650634646416 MULTI CID FTMS 0 0 0 11013 324624.25 0.026382381039263 -7 0.7703857421875 11 4 S{I|L} 2 -1 18.672 0.0 0.0 4.0133 0.0 0.0 247.1315662450076 0.0 247.1315662450076 0.0 4.002146173750987 0.0 0.0 0 0.3494850021680094 0.0 0.2614393726401688 0.0 S{I|L} 4.0133 - 63 + 1 1.464 122821.0 1.0 6332 4690 11013 HBL1_DMSO_200M_050219_2,11024 HBL1_DMSO_200M_050219_2,11024, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11025 59.562 147.0 842210.0 25 0 99963.0 + 33603 SIPNRIPKI 9 119 346.55394165184657 1036.6399955557397 3 346.5535156130791 MULTI CID FTMS 0 0 0 11013 317617.21875 0.6829966034131179 -1 0.1356773376464843 12 Unmodified _SIPNRIPKI_ ENSG00000164323|ENST00000458385|CFAP97;nc|ENSG00000164323|Q9P2B7-2|CFAP97 18.373094154950223 0.3393451798331396 4 {[TV]|[{I|L}S]}{I|L}K 4 5 33.43 0.0 0.0 3.2248 0.0 0.0 0.0 592.3299654596311 592.3299654596311 15.62218480316736 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}K 3.2248 - 700 + 1 1.464 104196.4 1.0 6333 4690 11013 HBL1_DMSO_200M_050219_2,11025 HBL1_DMSO_200M_050219_2,11025,SIPNRIPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11026 59.567 282.0 508250.0 25 0 92969.0 + 37382 TLAAKGGL 8 120 365.7266248190828 729.4386967049657 2 365.7262756228447 MULTI CID FTMS 0 0 0 11013 307865.5 0.8229828133130517 -1 0.1356773376464843 13 Unmodified _TLAAKGGL_ REV__nc|ENSG00000211649|A0A075B6I9|IGLV7-46;REV__nc|ENSG00000211652|P04211|IGLV7-43 5.760428011301431 0.7893668129297577 4 E{I|L}{I|L}SR{I|L} 6 -1 + 70.678 0.0 0.0 9.6893 9.6893 87.797 0.0 0.0 0.0 33.18758762624413 4.197275526017634 4.197275526017634 4.197275526017634 0 0.2302046884880938 1.6989700043360187 0.6989700043360187 0.5010912013506126 E{I|L}{I|L}SR{I|L};E{I|L}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 9.6893;9.1139 -;- 72 + 1 1.464 113238.4 1.0 6334 4690 11013 HBL1_DMSO_200M_050219_2,11026 HBL1_DMSO_200M_050219_2,11026,TLAAKGGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11027 59.579 668.0 287890.0 25 0 45620.0 34517 SNPIESCQNFY 11 124 651.2768597828929 1300.5391666325856 2 651.2767211794853 MULTI CID FTMS 0 0 0 11013 292069.28125 1.0 0 0.0 14 Unmodified _SNPIESCQNFY_ ENSG00000156113|ENST00000286628|KCNMA1;nc|ENSG00000156113|Q12791-2|KCNMA1;nc|ENSG00000156113|Q12791-3|KCNMA1;nc|ENSG00000156113|Q12791-4|KCNMA1;nc|ENSG00000156113|Q12791-5|KCNMA1;nc|ENSG00000156113|Q12791-7|KCNMA1 9.5439744041441 0.8301188422821563 4 {I|L}SGD 4 9 28.047 0.0 0.0 2.1566 0.0 0.0 298.1409363040453 627.209535440353 925.3504717443982 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {I|L}SGD 2.1566 - 235 + 1 1.464 142272.1 1.0 6335 4690 11013 HBL1_DMSO_200M_050219_2,11027 HBL1_DMSO_200M_050219_2,11027,SNPIESCQNFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11028 59.583 215.0 368510.0 25 0 38245.0 + 21650 PLPPPPPSI 9 125 457.26604847620416 912.5175440192083 2 457.7695190310478 MULTI CID FTMS 0 0 0 11013 251802.421875 0.613475274769199 -10 1.115875244140625 15 Unmodified _LPLHHPSI_ nc|ENSG00000150275|Q96QU1|PCDH15;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;nc|ENSG00000150275|Q96QU1-2|PCDH15 20.871210003555333 0.6025813472596342 4 PPPS{I|L} 5 4 26.675 0.0 0.0 2.9233 0.0 0.0 403.2307096591559 0.0 403.2307096591559 0.0 10.644490976677044 0.0 0.0 0 0.0 0.0 1.0044321917401078 0.0 PPPS{I|L} 2.9233 - 343 + 1 1.464 66025.4 1.0 6336 4690 11013 HBL1_DMSO_200M_050219_2,11028 HBL1_DMSO_200M_050219_2,11028,LPLHHPSI False False PLPPPPPSI 59.582604 457.769519031048 1528622.125 11013.0 nc|ENSG00000150275|Q96QU1|PCDH15;;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;;nc|ENSG00000150275|Q96QU1-2|PCDH15 2.5579381783803306 2.0 False 9.0 True non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 11029 59.598 800.0 269160.0 25 0 29076.0 + 39406 VALATRVI 8 170 421.7761204389699 841.5376879447398 2 421.7759582400322 MULTI CID FTMS 0 0 0 11013 207470.328125 1.0 0 0.0 16 Unmodified _VALATRVI_ ENSG00000084774|ENST00000264705|CAD 49.93300154707207 0.1395624531867191 4 VA{I|L}ATRV{I|L} 8 0 + 83.103 0.0 0.0 9.8751 9.8751 90.805 0.0 0.0 0.0 36.40978057358332 6.600519383056493 6.600519383056493 6.600519383056493 0 1.3494850021680094 2.0 0.8494850021680094 0.25 + + VA{I|L}ATRV{I|L};VA{I|L}ATR{I|L}V 9.8751;9.0908 +;- + 154 + 1 1.464 169188.8 0.8299999833106995 6337 4690 11013 HBL1_DMSO_200M_050219_2,11029 HBL1_DMSO_200M_050219_2,11029,VALATRVI False True VALATRVI 59.597593 421.775958240032 1669330.75 11013.0 ENSG00000084774|ENST00000264705|CAD 1.926152050495148 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11030 59.602 229.0 407950.0 25 0 43400.0 + -1 PKGPMPKV 8 119 435.25113249996593 868.4877120667319 2 435.2514526247978 MULTI CID FTMS 0 0 0 11013 215493.015625 0.3462030645185583 -17 1.85699462890625 17 Oxidation (M) _PKGPM(Oxidation (M))PKV_ REV__ENSG00000154305|ENST00000344922|MIA3;REV__nc|ENSG00000154305|Q5JRA6-2|MIA3;REV__nc|ENSG00000154305|Q5JRA6-4|MIA3 4.75600775471527 0.7954636275367004 4 {I|L} 1 -1 11.259 0.0 0.0 1.2964 0.0 0.0 737.3928309405585 0.0 737.3928309405585 0.0 1.861929520998249 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2964 - 37 + 1 1.464 75774.9 1.0 6338 4690 11013 HBL1_DMSO_200M_050219_2,11030 HBL1_DMSO_200M_050219_2,11030,PKGPMPKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11031 59.616 800.0 245910.0 25 0 15799.0 + 24692 MMPEEKLVEA 10 189 588.7847914814996 1175.5550300297991 2 588.7858154177666 MULTI CID FTMS 0 0 0 11013 191213.234375 0.9342267958600604 -1 0.1356773376464843 18 Unmodified _MMPEEKLVEA_ ENSG00000168101|ENST00000304301|NUDT16L1;ENST00000405142.1_1_16:4744898-4745177:+|nuORF 41.95555342248728 0.1369168616057562 4 [EP]EK{I|L}VEA{[{M(Oxidation (M))|F}D]|MM} 10 4 + 60.27 0.0 0.0 5.1269 5.1269 78.097 0.0 0.0 0.0 6.1094478473035565 0.3258344212375164 0.3258344212375164 5.994850021680094 0 0.0 1.3010299956639813 0.9634679910804403 0.0 [EP]EK{I|L}VEA{[{M(Oxidation (M))|F}D]|MM};[EP]EK{I|L}EVA{[{M(Oxidation (M))|F}D]|MM};{[{M(Oxidation (M))|F}D]|MM}{[MS]|[{M(Oxidation (M))|F}A]}V{I|L}[HK]EA;[EP]EK{I|L}V{[MS]|[{M(Oxidation (M))|F}A]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[EP]EK{I|L}MPA{[{M(Oxidation (M))|F}D]|MM};[EP]EKV{I|L}EA{[{M(Oxidation (M))|F}D]|MM};{[{M(Oxidation (M))|F}D]|MM}[VS]M{I|L}[HK]EA;[EP]EK{I|L}M[VS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[{M(Oxidation (M))|F}D]|MM}{[MS]|[{M(Oxidation (M))|F}A]}VPE{I|L}[PA]A;[EP]EK{I|L}V{[{M(Oxidation (M))|F}D]|MM}{[CP]|[EA]} 5.1269;4.6169;4.6072;4.5959;4.4021;3.9974;3.8824;3.8711;3.5476;3.5423 -;-;-;-;-;-;-;-;-;- 2556 1 1.464 147045.9 0.8899999856948853 6339 4690 11013 HBL1_DMSO_200M_050219_2,11031 HBL1_DMSO_200M_050219_2,11031,MMPEEKLVEA False True MMPEEKLVEA 59.615727 588.785815417767 1714387.375 11013.0 ENSG00000168101|ENST00000304301|NUDT16L1;;ENST00000405142.1_1_16:4744898-4745177:+|nuORF 4.681052843729655 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11032 59.63 800.0 348130.0 25 0 82589.0 + 37704 TLPETLDPA 9 103 956.4930352410648 955.4857587744648 1 956.4926635622978 MULTI CID FTMS 0 0 0 11013 193868.5625 0.7835348649228943 -1 0.1356773376464843 19 Unmodified _TLPETLDPA_ ENSG00000065518|ENST00000184266|NDUFB4;nc|ENSG00000065518|O95168-2|NDUFB4 78.14939416004806 0.0179651292570206 4 [EP]T{I|L}T{I|L}D[PA] 9 4 + 66.335 0.0 0.0 6.9425 6.9425 82.379 0.0 0.0 0.0 10.737862141609185 26.92803136799156 10.737862141609185 3.591896990114236 0 1.055462187404089 1.3010299956639813 1.9916440611282624 0.0 [EP]T{I|L}T{I|L}D[PA];[EP]T{I|L}D{I|L}T[PA];[EP]T{I|L}TAE[VP];[EP]T{I|L}D[VS][VP];[EP]TD{I|L}{I|L}T[PA];[EP]T{I|L}D[VP][VS];[EP]TVE{I|L}T[PA];[TP]E{I|L}T{I|L}D[PA];[EP]T{I|L}[VP]D[VS];[EP]TD{I|L}[VS][VP] 6.9425;6.5666;6.0968;6.0708;5.2388;5.2103;4.8572;4.8493;4.8492;4.743 -;-;-;-;-;-;-;-;-;- 4166 1 1.464 181745.3 0.6800000071525574 6340 4690 11013 HBL1_DMSO_200M_050219_2,11032 HBL1_DMSO_200M_050219_2,11032,TLPETLDPA True True TLPETLDPA 59.629591 956.492663562298 4558688.5 11013.0 ENSG00000065518|ENST00000184266|NDUFB4;;nc|ENSG00000065518|O95168-2|NDUFB4 4.48307736714681 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11033 59.636 307.0 407280.0 25 0 23950.0 + -1 MLLNLRSI 8 153 488.2868778785377 974.5592028238756 2 488.2871887087822 MULTI CID FTMS 0 0 0 11013 172432.1875 0.0056707124064786 15 -1.4498214721679688 20 Oxidation (M) _M(Oxidation (M))LLNLRSI_ REV__ENST00000470496.1_1_3:146234890-146239365:-|nuORF 32.30548876998284 0.3644845974844379 4 YPVQ{I|L}RT 7 -1 51.45 0.0 0.0 5.2793 0.0 0.0 0.0 114.0565661066039 114.0565661066039 19.03720958383822 0.0 0.0 0.0 0 0.9802046884880938 2.0 0.7614393726401688 0.0 YPVQ{I|L}RT 5.2793 - 729 + 1 1.464 97388.2 1.0 6341 4690 11013 HBL1_DMSO_200M_050219_2,11033 HBL1_DMSO_200M_050219_2,11033,MLLNLRSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11035 59.641 19.0 3208400.0 25 0 402920.0 + 22522 LPWEEREKI 9 82 400.5520263960959 1198.6342497884878 3 400.5521423220634 MULTI CID FTMS 0 0 0 11034 2606118.75 0.6495747921629855 1 -0.0650100708007812 1 Unmodified _LPWEEREKI_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 39.21299971606389 0.0797768173001226 4 {I|L}PWE{I|L}[WD]K{I|L} 9 3 + 79.193 0.0 0.0 6.6069 6.6069 75.254 0.0 0.0 0.0 61.974119043930216 13.182503180159344 13.182503180159344 0.5237875363565792 0 0.75 1.6989700043360187 1.2302046884880935 0.3807196863200844 {I|L}PWE{I|L}[WD]K{I|L};{I|L}PW{I|L}E[WD]K{I|L};{I|L}P{I|L}WE[WD]K{I|L};{I|L}PWEE{[RE]|[WV]}K{I|L};{I|L}P{[DA]|[EG]}E{I|L}[WD]K{I|L};{I|L}P{[DA]|[EG]}{I|L}E[WD]K{I|L};{I|L}P{I|L}{[DA]|[EG]}E[WD]K{I|L};{I|L}P{[DA]|[EG]}EE{[RE]|[WV]}K{I|L};{I|L}PWE{I|L}[PA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{I|L}PW{I|L}E[PA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V 6.6069;6.5632;6.0572;6.0381;5.8387;5.795;5.289;5.2699;5.0448;5.0011 -;-;-;+;-;-;-;-;-;- + 456 + 1 1.464 54632.3 1.0 6342 4691 11034 HBL1_DMSO_200M_050219_2,11035 HBL1_DMSO_200M_050219_2,11035,LPWEEREKI True True LPWEEREKI 59.640714 400.552142322063 63564921.5 11034.0 nc|ENSG00000118058|Q03164-2|KMT2A;;nc|ENSG00000118058|Q03164|KMT2A;;ENSG00000118058|ENST00000534358|KMT2A 6.531416416168213 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11036 59.642 28.0 1883600.0 25 0 242040.0 + 19833 LHHLSDLAL 9 92 509.7878803784988 1017.5612078237976 2 509.7877685427666 MULTI CID FTMS 0 0 0 11034 2003074.75 0.359188967948557 3 -0.2919540405273437 2 Unmodified _LHHLSDLAL_ ENSG00000165819|ENST00000298717|METTL3;ENST00000396522.6_1_14:21967741-21972178:-|nuORF;ENST00000536201.5_1_14:21969853-21979446:-|nuORF;ENST00000544500.5_1_14:21971797-21971971:-|nuORF 42.09456458481378 0.0639583784996157 4 {I|L}P 2 8 34.481 0.0 0.0 3.3886 0.0 0.0 0.0 804.4044230713336 804.4044230713336 8.467626665604783 0.0 0.0 0.0 0 0.2887254899964357 1.3010299956639813 0.0 0.0 {I|L}P 3.3886 - 76 + 1 1.464 45427.2 1.0 6343 4691 11034 HBL1_DMSO_200M_050219_2,11036 HBL1_DMSO_200M_050219_2,11036,LHHLSDLAL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11037 59.643 19.0 3253600.0 25 0 302420.0 + 15381 IPNFPRSTV 9 79 515.787589036681 1029.5606251401618 2 515.7878906130791 MULTI CID FTMS 0 0 0 11034 3242662.75 1.0 0 0.0 3 Unmodified _IPNFPRSTV_ ENSG00000198805|ENST00000361505|PNP;ENST00000557229.5_1_14:20937683-20942788:+|nuORF 39.94969957227396 0.0757326808254658 4 {I|L}PN{M(Oxidation (M))|F}P 5 4 63.488 0.0 0.0 6.1665 0.0 0.0 0.0 458.2381075494751 458.2381075494751 40.01979729363555 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.805462187404089 + {I|L}PN{M(Oxidation (M))|F}P 6.1665 + + 112 + 1 1.464 55392.5 1.0 6344 4691 11034 HBL1_DMSO_200M_050219_2,11037 HBL1_DMSO_200M_050219_2,11037,IPNFPRSTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11038 59.644 16.0 3080700.0 25 0 689570.0 + 43104 VYNYAEQTL 9 73 550.7668724451122 1099.5191919570243 2 550.7670776247978 MULTI CID FTMS 0 0 0 11034 2860982.0 0.5037366720667719 -2 0.2512474060058594 4 Unmodified _VYNYAEQTL_ ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 23.1484247019978 0.2366544122328345 4 [YV]N 3 6 24.437 0.0 0.0 2.2225 0.0 0.0 0.0 720.3201007307149 720.3201007307149 3.9355304651828495 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [YV]N 2.2225 + + 166 1 1.464 45213.1 1.0 6345 4691 11034 HBL1_DMSO_200M_050219_2,11038 HBL1_DMSO_200M_050219_2,11038,VYNYAEQTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11039 59.645 20.0 2415100.0 25 0 378030.0 + 24770 MPHNQFIKM 9 79 573.2832709501703 1144.5519889671405 2 573.2836791872978 MULTI CID FTMS 0 0 0 11034 2616515.25 1.0 0 0.0 5 Unmodified _MPHNQFIKM_ ENSG00000162511|ENST00000294507|LAPTM5 39.957323273325 0.0756908302845263 4 {[QN]|[E{I|L}]|[KN]}H{M(Oxidation (M))|F}{I|L}D{I|L} 7 6 34.742 0.0 0.0 3.0354 0.0 0.0 0.0 274.123863317003 274.123863317003 13.772591542105772 0.0 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}H{M(Oxidation (M))|F}{I|L}D{I|L} 3.0354 - 700 1 1.464 43038.2 1.0 6346 4691 11034 HBL1_DMSO_200M_050219_2,11039 HBL1_DMSO_200M_050219_2,11039,MPHNQFIKM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11040 59.647 23.0 2598300.0 25 0 527870.0 -1 EQDCKMMF 8 66 552.7095915737614 1103.4046302143229 2 552.7100097537041 MULTI CID FTMS 0 0 0 11034 2100492.25 0.6282035734013947 1 -0.0650100708007812 6 Carbamidomethyl (C),Oxidation (M) _EQDC(Carbamidomethyl (C))KM(Oxidation (M))MF_ ENSG00000271079|ENST00000420911|CTAGE15;ENSG00000271321|ENST00000470691|CTAGE6 5.230669730166228 0.792582437072536 4 [AG]S 3 -1 14.895 0.0 0.0 1.3499 0.0 0.0 0.0 885.2903931139898 885.2903931139898 3.3007560848118125 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [AG]S 1.3499 - 29 1 1.464 53548.7 1.0 6347 4691 11034 HBL1_DMSO_200M_050219_2,11040 HBL1_DMSO_200M_050219_2,11040,EQDCKMMF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11041 59.648 25.0 1952300.0 25 0 115930.0 + + 5955 SQIALNEKL 9 87 507.793277286154 1013.572001639108 2 508.2935363650322 MULTI CID FTMS 0 0 0 11034 2039152.625 0.3962100795761122 -2 0.2512474060058594 7 Unmodified _DQLALAATLV_ ENSG00000175390|ENST00000651655|EIF3F 12.240655878213236 0.6421556946785427 4 [SG]TE{I|L}VV{I|L}N 9 -1 33.79 0.0 0.0 3.3338 0.0 0.0 0.0 98.02547632388904 98.02547632388904 17.59250301305294 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.2614393726401688 [SG]TE{I|L}VV{I|L}N 3.3338 - 226 + 1 1.464 44830.8 1.0 6348 4691 11034 HBL1_DMSO_200M_050219_2,11041 HBL1_DMSO_200M_050219_2,11041,DQLALAATLV False False SQIALNEKL 59.647787 508.293536365032 41040812.0 11034.0 ENSG00000175390|ENST00000651655|EIF3F 0.9506121774514515 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11042 59.649 31.0 1877400.0 25 0 218800.0 + 6052 DSFEFKAHV 9 95 540.2614960066768 1078.5084390801535 2 540.2618896365166 MULTI CID FTMS 0 0 0 11034 1808414.25 0.6053205631472003 1 -0.0650100708007812 8 Unmodified _DSFEFKAHV_ ENSG00000101596|ENST00000320876|SMCHD1;nc|ENSG00000101596|A6NHR9-2|SMCHD1 69.33821966488729 0.021354776001734 4 DS{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV 9 0 + 99.167 0.0 0.0 9.1948 9.1948 86.492 0.0 0.0 0.0 36.47817481888637 3.521825181113627 3.521825181113627 3.521825181113627 0 1.5356668758921828 2.0 0.4247425010840047 0.0 + + DS{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAHV;DS{M(Oxidation (M))|F}E{M(Oxidation (M))|F}KAVH;DS{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V][HA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[RV][YG]HV;{[DS]|[MA]|[CV]|TT}[RV]HDDHV;{[DS]|[MA]|[CV]|TT}[RV]{M(Oxidation (M))|F}[YG]HV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HA]T[HC]HV 9.1948;8.8683;4.3896;1.716;0.71539;0.62554;0.099927 +;-;-;-;-;-;- + 190 + 1 1.464 48019.2 1.0 6349 4691 11034 HBL1_DMSO_200M_050219_2,11042 HBL1_DMSO_200M_050219_2,11042,DSFEFKAHV True True DSFEFKAHV 59.648964 540.261889636517 43046595.0 11034.0 ENSG00000101596|ENST00000320876|SMCHD1;;nc|ENSG00000101596|A6NHR9-2|SMCHD1 8.800985972086588 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11043 59.65 33.0 1616400.0 25 0 130910.0 + 31051 RLIEESVTV 9 86 523.2980211804338 1044.5814894276675 2 523.2989990115166 MULTI CID FTMS 0 0 0 11034 1488671.375 0.4427135244638348 1 -0.0650100708007812 9 Unmodified _RLIEESVTV_ ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769-3|NUP160;nc|ENSG00000030066|Q12769|NUP160 34.221707139014875 0.1071766711162635 4 {[TV]|[{I|L}S]}[KS][QP]SVTV 10 5 + 50.155 0.0 0.0 4.8015 4.8015 83.498 0.0 0.0 0.0 4.40999983289359 25.930314954627818 4.40999983289359 14.825162866063678 0 0.9247425010840048 1.2218487496163564 0.805462187404089 0.0 {[TV]|[{I|L}S]}[KS][QP]SVTV;[{I|L}T][W{I|L}][DV]VTV;{[ES]|[DT]|[{I|L}C]}{I|L}[{I|L}A][DV]VTV;[{I|L}T][W{I|L}][{I|L}A]ETV;[{I|L}T][W{I|L}][VS]VEV;[{I|L}T][W{I|L}][{I|L}A]TEV;{[ES]|[DT]|[{I|L}C]}{I|L}[{I|L}A][{I|L}A]ETV;{[ES]|[DT]|[{I|L}C]}{I|L}[{I|L}A][VS]VEV;{[ES]|[DT]|[{I|L}C]}{I|L}[{I|L}A][{I|L}A]TEV 4.8015;3.3822;2.8868;2.3065;2.2088;2.116;1.8111;1.7134;1.6206 -;-;-;-;-;-;-;-;- 385 1 1.464 49616.7 1.0 6350 4691 11034 HBL1_DMSO_200M_050219_2,11043 HBL1_DMSO_200M_050219_2,11043,RLIEESVTV True True RLIEESVTV 59.650143 523.298999011517 46353536.0 11034.0 nc|ENSG00000030066|Q12769|NUP160;;nc|ENSG00000030066|Q12769-3|NUP160;;ENSG00000030066|ENST00000378460|NUP160 4.9295289516448975 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11044 59.652 83.0 661480.0 25 0 53119.0 + 31903 RTVEASLEAV 10 76 537.7942222516818 0 537.7938110232353 PEAK CID FTMS 0 0 0 11034 642078.75 1.0 0 0.0 10 Unmodified _RTVEASLEAV_ chr19:17543433-17546686|45|45.27|0.54|6.38|+|ENST00000599124|NIBAN3,NIBAN3;chr19:17546797-17549455|45|19.44|0.22|6.49|+|ENST00000600519|NIBAN3,NIBAN3;chr19:17546797-17551786|45|44.04|0.49|6.48|+|ENST00000600871|NIBAN3,NIBAN3;chr19:17549527-17553313|46|34.41|0.39|6.48|+|ENST00000601861|NIBAN3,NIBAN3;ENSG00000167483|ENST00000599164|NIBAN3;ENST00000595601.1_1_19:17651040-17654446:+|nuORF;nc|ENSG00000167483|Q86XR2-2|NIBAN3;nc|ENSG00000167483|Q86XR2-3|NIBAN3;nc|ENSG00000167483|Q86XR2-4|NIBAN3;nc|ENSG00000167483|Q86XR2-5|NIBAN3;nc|ENSG00000167483|Q86XR2-6|NIBAN3;nc|ENSG00000167483|Q86XR2-7|NIBAN3;nc|ENSG00000167483|Q86XR2|NIBAN3 21.59015148037692 0.285463238350904 4 AE{I|L}SA 5 7 41.454 0.0 0.0 3.8613 0.0 0.0 117.08035353205408 482.2363985651001 599.3167520971541 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 AE{I|L}SA 3.8613 - 49 + 1 1.464 49165.1 1.0 6351 4691 11034 HBL1_DMSO_200M_050219_2,11044 HBL1_DMSO_200M_050219_2,11044,RTVEASLEAV False True RTVEASLEAV 59.652024 537.793811023235 5957985.5 11034.0 chr19:17546797-17549455|45|19.44|0.22|6.49|+|ENST00000600519|NIBAN3,NIBAN3;;chr19:17549527-17553313|46|34.41|0.39|6.48|+|ENST00000601861|NIBAN3,NIBAN3;;nc|ENSG00000167483|Q86XR2-3|NIBAN3;;nc|ENSG00000167483|Q86XR2-5|NIBAN3;;nc|ENSG00000167483|Q86XR2-4|NIBAN3;;nc|ENSG00000167483|Q86XR2-6|NIBAN3;;ENSG00000167483|ENST00000599164|NIBAN3;;chr19:17546797-17551786|45|44.04|0.49|6.48|+|ENST00000600871|NIBAN3,NIBAN3;;ENST00000595601.1_1_19:17651040-17654446:+|nuORF;;nc|ENSG00000167483|Q86XR2|NIBAN3;;nc|ENSG00000167483|Q86XR2-2|NIBAN3;;nc|ENSG00000167483|Q86XR2-7|NIBAN3;;chr19:17543433-17546686|45|45.27|0.54|6.38|+|ENST00000599124|NIBAN3,NIBAN3 5.532784144083659 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11045 59.654 103.0 524590.0 25 0 92579.0 + 12950 HAFQTLTHI 9 85 534.2854743944669 0 534.2858764529228 PEAK CID FTMS 0 0 0 11034 516228.53125 1.0 0 0.0 11 Unmodified _HAFQTLTHI_ ENSG00000136731|ENST00000259253|UGGT1;ENST00000438277.5_1_2:128855105-128928859:+|nuORF;nc|ENSG00000136731|Q9NYU2-2|UGGT1 66.45667989310934 0.0141522131504411 4 T{I|L}TQ{M(Oxidation (M))|F} 5 6 46.899 0.0 0.0 4.3972 0.0 0.0 268.15199019342737 205.0736483209594 473.2256385143868 0.0 0.0 0.0 0.0 0 1.774227503252014 0.0 1.3494850021680094 0.0 T{I|L}TQ{M(Oxidation (M))|F} 4.3972 - 122 + 1 1.464 49492.6 1.0 6352 4691 11034 HBL1_DMSO_200M_050219_2,11045 HBL1_DMSO_200M_050219_2,11045,HAFQTLTHI True True HAFQTLTHI 59.65423 534.285876452923 4277906.0 11034.0 ENSG00000136731|ENST00000259253|UGGT1;;nc|ENSG00000136731|Q9NYU2-2|UGGT1;;ENST00000438277.5_1_2:128855105-128928859:+|nuORF 7.390681584676106 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11046 59.666 672.0 231420.0 25 0 43720.0 -1 0 67 1123.4609839871978 3367.3611225617933 3 1124.130297839642 MULTI CID FTMS 0 0 0 11034 447888.9375 0.0733883955153814 3 -0.2919540405273437 12 4 GQA 3 -1 14.565 0.0 0.0 0.43253 0.0 0.0 2419.0001739307377 689.2323092096311 3108.232483140369 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 GQA 0.43253 - 63 + 1 1.464 129050.4 1.0 6353 4691 11034 HBL1_DMSO_200M_050219_2,11046 HBL1_DMSO_200M_050219_2,11046, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11047 59.677 606.0 310620.0 25 0 33530.0 + -1 ELINLHVLCVM 11 119 670.8555228390702 1339.6964927449403 2 670.8557617068291 MULTI CID FTMS 0 0 0 11034 392976.96875 0.374544822144521 2 -0.1990280151367187 13 Carbamidomethyl (C) _ELINLHVLC(Carbamidomethyl (C))VM_ REV__ENSG00000119041|ENST00000263956|GTF3C3;REV__nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3 15.248480904072842 0.7179608125786238 4 [{I|L}T]{I|L}[PS]TAT{I|L} 9 -1 34.42 0.0 0.0 2.5693 0.0 0.0 0.0 439.1544790655223 439.1544790655223 14.058415520056547 0.0 0.0 0.0 0 0.0 1.0 1.960409376976188 0.0 [{I|L}T]{I|L}[PS]TAT{I|L} 2.5693 - 2590 1 1.464 137209.9 1.0 6354 4691 11034 HBL1_DMSO_200M_050219_2,11047 HBL1_DMSO_200M_050219_2,11047,ELINLHVLCVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11048 59.679 101.0 631840.0 25 0 59866.0 + 22152 LPPSALQSV 9 93 456.26346091798274 910.5123689027656 2 456.2636596560478 MULTI CID FTMS 0 0 0 11034 367743.0 0.2614202712975605 -10 1.162872314453125 14 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 34.10243960390752 0.1078313939113124 4 [{I|L}P]NMRAP{I|L} 8 7 + 37.075 0.0 0.0 4.0718 4.0718 70.46 0.0 0.0 0.0 5.136372634590458 2.2315227800167747 2.2315227800167747 3.24108564924763 0 0.5682503180159344 1.6989700043360187 0.0 0.0 [{I|L}P]NMRAP{I|L};[{I|L}P]{[SA]|[TG]}P{I|L}Q[VS];[{I|L}P]{[SA]|[TG]}PQ{I|L}[VS];[{I|L}P]GGMRAP{I|L};[{I|L}P]{[SA]|[TG]}P{I|L}[AG][VS];[{I|L}P]{[SA]|[TG]}P[AG]{I|L}[VS];[AG][VP]MRAP{I|L};[AG]{I|L}[Q{I|L}]EAP{I|L};[VP]QMRAP{I|L};[AG]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AP{I|L} 4.0718;3.7159;3.5225;3.0546;2.7046;2.5112;1.4218;1.3911;1.3513;1.0661 -;-;-;-;-;-;-;-;-;- 245 1 1.464 55582.7 1.0 6355 4691 11034 HBL1_DMSO_200M_050219_2,11048 HBL1_DMSO_200M_050219_2,11048,LPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11049 59.682 167.0 534150.0 25 0 113020.0 + 9834 FPEEEWRHV 9 104 410.1964458952241 1227.5675082858722 3 410.1961852908134 MULTI CID FTMS 0 0 0 11034 347748.03125 0.7190319092892948 3 -0.2919540405273437 15 Unmodified _FPEEEWRHV_ ENSG00000197037|ENST00000394152|ZSCAN25;ENST00000473646.5_1_7:99214596-99221826:+|nuORF;nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25 47.74868867922204 0.0453060283459952 4 {M(Oxidation (M))|F}PEEEWRHV 9 0 + 63.119 0.0 0.0 5.1418 5.1418 85.66 0.0 0.0 0.0 46.79805664215991 8.927900303521312 8.927900303521312 19.826155652630817 0 0.1989700043360188 0.0 0.805462187404089 0.3054621874040891 + + {M(Oxidation (M))|F}PEEEWRHV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HC][K{I|L}]EEPE;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[HC]{[DA]|[EG]}RHV;[YV][HC]EWRHV;[YV]E[HC]WRHV 5.1418;3.5267;2.4107;1.2651;0.87638 +;-;-;-;- + 189 + 1 1.464 73234.4 1.0 6356 4691 11034 HBL1_DMSO_200M_050219_2,11049 HBL1_DMSO_200M_050219_2,11049,FPEEEWRHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11050 59.688 312.0 252840.0 25 0 21910.0 + 11041 GDAHIYLNHI 10 115 576.7934004485688 1151.5722479639376 2 576.7939941287041 MULTI CID FTMS 0 0 0 11034 316636.75 0.4711992254240961 1 -0.0650100708007812 16 Unmodified _GDAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 76.82478488871298 0.0187167883027705 4 [HN]E{I|L}Y{I|L}NH{I|L} 9 4 + 71.644 0.0 0.0 6.2214 6.2214 77.157 0.0 0.0 0.0 2.3384789699701543 2.8951372453458504 2.3384789699701543 2.3384789699701543 0 2.018930178484529 0.744727494896694 0.3252574989159953 0.2215141619232908 [HN]E{I|L}Y{I|L}NH{I|L};[HA][DG]{I|L}Y{I|L}NH{I|L};[DG]AH{I|L}Y{I|L}NH{I|L};[DG]AH{I|L}Y{I|L}N{I|L}H;[H{I|L}]DQY{I|L}NH{I|L};[HN]E{I|L}Y{I|L}GGH{I|L};[HA][DG]{I|L}Y{I|L}GGH{I|L};[HA]{I|L}[DG]Y{I|L}NH{I|L};[H{I|L}]A[DG]Y{I|L}NH{I|L};[DG]AH{I|L}Y{I|L}GGH{I|L} 6.2214;6.0183;5.97;5.7797;5.4466;5.4218;5.2225;4.9084;4.8397;4.673 -;-;+;-;-;-;-;-;-;- + 1277 1 1.464 61770.1 1.0 6357 4691 11034 HBL1_DMSO_200M_050219_2,11050 HBL1_DMSO_200M_050219_2,11050,GDAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11051 59.692 144.0 766640.0 25 0 69211.0 + 16880 KIFHINPRL 9 112 379.9017547537621 1136.6834348614864 3 379.9009887576103 MULTI CID FTMS 0 0 0 11034 289826.65625 0.6773517322895488 -1 0.115570068359375 17 Unmodified _KIFHINPRL_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A 22.65808497894818 0.2428932432760099 4 K{I|L}{M(Oxidation (M))|F}H{I|L}N{I|L}[RP] 9 2 + 63.527 0.0 0.0 5.5888 5.5888 81.443 0.0 0.0 0.0 38.23674579308821 5.130267019893452 5.130267019893452 7.257724967479859 0 0.7302046884880937 0.0 0.0 0.6382104921644451 K{I|L}{M(Oxidation (M))|F}H{I|L}N{I|L}[RP];K{I|L}{M(Oxidation (M))|F}{I|L}HN{I|L}[RP];K{I|L}{M(Oxidation (M))|F}H{I|L}{I|L}N[RP];K{I|L}{M(Oxidation (M))|F}H{I|L}GG{I|L}[RP];K{I|L}{I|L}{M(Oxidation (M))|F}HN{I|L}[RP];K{I|L}{M(Oxidation (M))|F}{I|L}H{I|L}N[RP];K{I|L}{M(Oxidation (M))|F}{I|L}HGG{I|L}[RP];K{I|L}{M(Oxidation (M))|F}H{I|L}{I|L}GG[RP];K{I|L}{I|L}{M(Oxidation (M))|F}H{I|L}N[RP];K{I|L}{I|L}{M(Oxidation (M))|F}HGG{I|L}[RP] 5.5888;4.9503;4.8453;4.7787;4.6855;4.2068;4.1402;4.0353;3.942;3.8754 -;-;-;-;-;-;-;-;-;- 322 + 1 1.464 93377.9 1.0 6358 4691 11034 HBL1_DMSO_200M_050219_2,11051 HBL1_DMSO_200M_050219_2,11051,KIFHINPRL False True KIFHINPRL 59.691707 379.90098875761 3235702.75 11034.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A 5.24296776453654 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11052 59.696 253.0 680670.0 25 0 64499.0 + 13126 HFFDGKTAL 9 158 518.2653746406869 1034.5161963481737 2 518.2654907107353 MULTI CID FTMS 0 0 0 11034 303522.28125 1.0 0 0.0 18 Unmodified _HFFDGKTAL_ ENSG00000168228|ENST00000302874|ZCCHC4;ENST00000505451.5_1_4:25314431-25353701:+|nuORF;nc|ENSG00000168228|Q9H5U6-3|ZCCHC4 22.736283301280096 0.2418982879461534 4 {[TV]|[{I|L}S]}[YG]PC 6 8 18.204 0.0 0.0 1.7597 0.0 0.0 0.0 411.2224090769425 411.2224090769425 -0.4799179148190546 0.0 -0.4799179148190546 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}[YG]PC 1.7597 - 600 1 1.464 135031.5 1.0 6359 4691 11034 HBL1_DMSO_200M_050219_2,11052 HBL1_DMSO_200M_050219_2,11052,HFFDGKTAL False True HFFDGKTAL 59.69642 518.265490710735 2205237.75 11034.0 ENSG00000168228|ENST00000302874|ZCCHC4;;nc|ENSG00000168228|Q9H5U6-3|ZCCHC4;;ENST00000505451.5_1_4:25314431-25353701:+|nuORF 2.5500899950663247 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11053 59.699 101.0 635570.0 25 0 33372.0 + 25237 MVLETAENV 9 122 503.2501054160001 1004.4856578988002 2 503.2500793337822 MULTI CID FTMS 0 0 0 11034 277582.25 0.4971618677896509 -2 0.2512474060058594 19 Unmodified _MVLETAENV_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 46.92087301778293 0.0471210510596396 4 {[QN]|[E{I|L}]|[KN]}T{[ET]|[MV]}A 6 5 21.458 0.0 0.0 2.1362 0.0 0.0 0.0 357.14432424085027 357.14432424085027 8.359210144627383 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.3979400086720375 0.0 {[QN]|[E{I|L}]|[KN]}T{[ET]|[MV]}A 2.1362 - 154 1 1.464 54395.3 1.0 6360 4691 11034 HBL1_DMSO_200M_050219_2,11053 HBL1_DMSO_200M_050219_2,11053,MVLETAENV True True MVLETAENV 59.698586 503.250079333782 4200068.0 11034.0 nc|ENSG00000127481|Q5T4S7-2|UBR4;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4 5.367175261179606 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11054 59.701 141.0 308500.0 25 0 20935.0 29384 QLADAKQCVQF 11 76 625.813101335061 1249.611649736922 2 625.8130981326103 MULTI CID FTMS 0 0 0 11034 267776.1875 0.795730923641075 -1 0.115570068359375 20 Unmodified _QLADAKQCVQF_ ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43-13|PDE4DIP;nc|ENSG00000178104|Q5VU43-2|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;nc|ENSG00000178104|Q5VU43-6|PDE4DIP;nc|ENSG00000178104|Q5VU43-7|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP 20.41453444215458 0.6105011870913812 4 [AG]K{I|L}QQEAM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 11 8 + 47.117 0.0 0.0 3.7705 3.7705 64.477 0.0 0.0 0.0 11.8045606445813 7.367585652254178 7.367585652254178 0.6687674038007714 0 0.3494850021680094 1.6989700043360187 0.0 1.8684151806525389 [AG]K{I|L}QQEAM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[AG]{I|L}KQQEAM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[KQ]{I|L}QQEAM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[Q{I|L}]KQQEAM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.7705;3.717;2.8259;2.7724 -;-;-;- 66 1 1.464 42908.4 1.0 6361 4691 11034 HBL1_DMSO_200M_050219_2,11054 HBL1_DMSO_200M_050219_2,11054,QLADAKQCVQF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11056 59.706 26.0 1985200.0 25 0 156010.0 + 22120 LPPPVQTQI 9 85 496.7926827535134 991.5708125738269 2 496.7926513552666 MULTI CID FTMS 0 0 0 11055 2263904.5 0.5670203638776261 10 -1.0238800048828125 1 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 30.22481116460888 0.1466181017706357 4 [{I|L}P]PPVQD{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 50.072 0.0 0.0 5.0497 5.0497 52.702 0.0 0.0 0.0 22.82959449089443 1.249387366082999 1.249387366082999 0.0 0 0.5 2.0 0.0 0.0 [{I|L}P]PPVQD{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PNP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PNTQP{I|L}{I|L};[{I|L}P]PPN{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPV[AG]D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PGGP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PNT[AG]P{I|L}{I|L};[{I|L}P]PGGTQP{I|L}{I|L};[{I|L}P]PPGG{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PNP[QT]{I|L}{I|L} 5.0497;5.0497;4.8992;4.5686;4.1211;4.1211;3.9705;3.9705;3.6399;3.5883 -;-;-;-;-;-;-;-;-;- 658 1 1.459 45169.6 1.0 6362 4692 11055 HBL1_DMSO_200M_050219_2,11056 HBL1_DMSO_200M_050219_2,11056,LPPPVQTQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11057 59.707 54.0 652390.0 25 0 55702.0 + 43166 VYQTYVNAM 9 81 544.758451874158 1087.502350815116 2 544.7580444216728 MULTI CID FTMS 0 0 0 11055 912379.8125 0.7068720500546832 1 -0.1340179443359375 2 Unmodified _VYQTYVNAM_ ENSG00000119203|ENST00000238112|CPSF3 37.97399986684836 0.0865783450051559 4 [YV]TQYV[C(Carbamidomethyl (C))R] 8 5 + 55.45 0.0 0.0 5.0989 5.0989 77.95 0.0 0.0 0.0 5.980297736185783 6.989700043360188 5.980297736185783 5.980297736185783 0 0.0 2.0 1.305462187404089 0.0 [YV]TQYV[C(Carbamidomethyl (C))R];[YT]VQYV[C(Carbamidomethyl (C))R];[YV]QTYV[C(Carbamidomethyl (C))R];[YT]QVYV[C(Carbamidomethyl (C))R];[YV]T[AG]YV[C(Carbamidomethyl (C))R];[AG]TYVYV[C(Carbamidomethyl (C))R];[YT]V[AG]YV[C(Carbamidomethyl (C))R];[AG]YTVYV[C(Carbamidomethyl (C))R];[YG]ATVYV[C(Carbamidomethyl (C))R];[YV][AG]TYV[C(Carbamidomethyl (C))R] 5.0989;4.549;4.3829;4.3818;4.2472;3.7405;3.6973;3.6924;3.6156;3.5312 -;-;-;-;-;-;-;-;-;- 414 1 1.459 33314.9 1.0 6363 4692 11055 HBL1_DMSO_200M_050219_2,11057 HBL1_DMSO_200M_050219_2,11057,VYQTYVNAM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11058 59.708 24.0 3072700.0 25 0 551510.0 -1 0 95 346.70839167899976 691.4022304247995 2 346.7080566287041 MULTI CID FTMS 0 0 0 11055 2647673.75 0.5081766933888967 -1 0.0650100708007812 3 4 [R{M(Oxidation (M))|F}]GVT{I|L} 6 -1 + 48.566 0.0 0.0 7.0243 7.0243 87.503 0.0 0.0 0.0 5.157242179326985 41.57673934921631 5.157242179326985 7.822267537048532 0 0.9247425010840048 0.0 0.3807196863200844 0.7887254899964358 [R{M(Oxidation (M))|F}]GVT{I|L};[R{M(Oxidation (M))|F}]KE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[R{M(Oxidation (M))|F}]{I|L} 7.0243;5.893;2.2421 -;-;- 202 1 1.459 61773.6 1.0 6364 4692 11055 HBL1_DMSO_200M_050219_2,11058 HBL1_DMSO_200M_050219_2,11058, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11059 59.709 33.0 1117900.0 25 0 81133.0 27103 PFIDKYWEC 9 68 600.7748072761125 1199.5350616190249 2 600.7751953005791 MULTI CID FTMS 0 0 0 11055 1117491.125 0.5542497655269283 -1 0.0650100708007812 4 Unmodified _PFIDKYWEC_ ENSG00000129691|ENST00000343823|ASH2L;ENST00000524263.5_1_8:37968258-37975025:+|nuORF;nc|ENSG00000129691|Q9UBL3-2|ASH2L;nc|ENSG00000129691|Q9UBL3-3|ASH2L 7.289230182591677 0.6602208344931196 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}PVV 10 7 + 26.144 0.0 0.0 2.1795 2.1795 65.684 0.0 0.0 0.0 2.956349637772746 8.976949551052371 2.956349637772746 3.0102999566398125 0 0.6989700043360187 1.3979400086720375 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}PVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}[YN]SPVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}{[C(Carbamidomethyl (C))G]|[NC]}P{M(Oxidation (M))|F}VV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}{[C(Carbamidomethyl (C))G]|[NC]}PV[{M(Oxidation (M))|F}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}{[C(Carbamidomethyl (C))G]|[NC]}VP[{M(Oxidation (M))|F}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}[C(Carbamidomethyl (C))R]P[{M(Oxidation (M))|F}V] 2.1795;1.9286;1.7627;1.199;0.69714;0.15258 -;-;-;-;-;- 78 1 1.459 30476.2 1.0 6365 4692 11055 HBL1_DMSO_200M_050219_2,11059 HBL1_DMSO_200M_050219_2,11059,PFIDKYWEC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11060 59.711 28.0 1662100.0 25 0 104020.0 + 30364 RAIENIDTL 9 85 522.7873504207547 0 522.7870361208916 PEAK CID FTMS 0 0 0 11055 957595.375 1.0 0 0.0 5 Unmodified _RAIENIDTL_ ENSG00000115685|ENST00000234038|PPP1R7;nc|ENSG00000115685|Q15435-2|PPP1R7;nc|ENSG00000115685|Q15435-3|PPP1R7;nc|ENSG00000115685|Q15435-4|PPP1R7;nc|ENSG00000115685|Q15435-5|PPP1R7 23.78978130925829 0.1667157386347964 4 TD{I|L}NE 5 7 33.003 0.0 0.0 3.1626 0.0 0.0 131.0944019139718 337.2008455865844 468.2952475005562 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 TD{I|L}NE 3.1626 - 141 + 1 1.459 41085.1 1.0 6366 4692 11055 HBL1_DMSO_200M_050219_2,11060 HBL1_DMSO_200M_050219_2,11060,RAIENIDTL False True RAIENIDTL 59.710665 522.787036120892 7468910.0 11055.0 ENSG00000115685|ENST00000234038|PPP1R7;;nc|ENSG00000115685|Q15435-4|PPP1R7;;nc|ENSG00000115685|Q15435-3|PPP1R7;;nc|ENSG00000115685|Q15435-5|PPP1R7;;nc|ENSG00000115685|Q15435-2|PPP1R7 4.091545104980469 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11061 59.712 76.0 910570.0 25 0 105490.0 + 28649 DSLITPHV 8 94 441.7683182352048 881.5220835372097 2 441.7681762576103 MULTI CID FTMS 0 0 0 11055 781023.8125 0.8763310590281016 -12 1.2964553833007812 6 Unmodified _PVKTEVPL_ ENSG00000153201|ENST00000283195|RANBP2;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000169629|ENST00000302558|RGPD8;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000187627|P0DJD0|RGPD1 21.74664581756881 0.5868176546531598 4 VPC{I|L}{I|L} 5 6 47.779 0.0 0.0 5.4201 0.0 0.0 0.0 353.1838472955688 353.1838472955688 23.71977829623269 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VPC{I|L}{I|L} 5.4201 - 412 + 1 1.459 61377.0 1.0 6367 4692 11055 HBL1_DMSO_200M_050219_2,11061 HBL1_DMSO_200M_050219_2,11061,PVKTEVPL False False DSLITPHV 59.712415 441.76817625761 3295424.5 11055.0 ENSG00000153201|ENST00000283195|RANBP2;;ENSG00000153165|ENST00000409886|RGPD3;;ENSG00000169629|ENST00000302558|RGPD8;;chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;;ENSG00000015568|ENST00000016946|RGPD5;;ENSG00000185304|ENST00000398146|RGPD2;;ENSG00000187627|ENST00000641458|RGPD1;;ENSG00000183054|ENST00000329516|RGPD6;;ENSG00000196862|ENST00000408999|RGPD4;;nc|ENSG00000187627|P0DJD0|RGPD1 3.368927001953125 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11062 59.723 607.0 644640.0 25 0 187040.0 + 43742 YDSSSEEES 9 68 1032.3640275946525 1031.3567511280526 1 1032.365283191204 MULTI CID FTMS 0 0 0 11055 454486.0 1.0 0 0.0 7 Unmodified _YDSSSEEES_ REV__nc|ENSG00000150275|Q96QU1-4|PCDH15 11.640296217721598 0.521594087909532 4 YN{[YC]|[HE]}G 5 -1 6.8842 0.0 0.0 0.66749 0.0 0.0 0.0 428.12763391666255 428.12763391666255 2.0072949979695185 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 YN{[YC]|[HE]}G 0.66749 - 34 + 1 1.459 250564.7 1.0 6368 4692 11055 HBL1_DMSO_200M_050219_2,11062 HBL1_DMSO_200M_050219_2,11062,YDSSSEEES False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11063 59.726 161.0 538970.0 25 0 107300.0 + 22058 LPPPPPPLA 9 98 449.7732923312103 897.5320317292206 2 449.7736694216728 MULTI CID FTMS 0 0 0 11055 391616.8125 0.4688727393216603 -10 1.0787086486816406 8 Unmodified _LPPPPPPLA_ ENSG00000068489|ENST00000262293|PRR11 79.93452657146344 0.0175326119056068 4 [{I|L}P]PPPPW 7 3 63.276 0.0 0.0 7.05 0.0 0.0 0.0 110.075077360601 110.075077360601 50.17683537374076 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.0 0.0 [{I|L}P]PPPPW 7.05 - 278 1 1.459 71726.5 1.0 6369 4692 11055 HBL1_DMSO_200M_050219_2,11063 HBL1_DMSO_200M_050219_2,11063,LPPPPPPLA True True PLPPPPPLA 59.726224 449.7744 34197928.0 11055.0 ENSG00000176182|ENST00000322217|MYPOP 2.4492477575937905 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11064 59.729 150.0 486660.0 25 0 33493.0 + 41873 VPYPVTTTV 9 117 488.771436902911 975.528320872622 2 488.7715026736259 MULTI CID FTMS 0 0 0 11055 304154.78125 1.0 0 0.0 9 Unmodified _VPYPVTTTV_ ENSG00000135218|ENST00000447544|CD36;nc|ENSG00000135218|P16671-2|CD36;nc|ENSG00000135218|P16671-3|CD36 34.18733598223924 0.1073653526364521 4 PME{[WT]|[RM]}TV 7 5 25.679 0.0 0.0 2.6323 0.0 0.0 113.12352675825908 0.0 113.12352675825908 0.0 -2.024305364455259 -2.024305364455259 0.0 0 0.0 0.0 0.3494850021680094 0.0 PME{[WT]|[RM]}TV 2.6323 - 543 + 1 1.459 60275.2 1.0 6370 4692 11055 HBL1_DMSO_200M_050219_2,11064 HBL1_DMSO_200M_050219_2,11064,VPYPVTTTV True True VPYPVTTTV 59.729201 488.771502673626 2553226.0 11055.0 ENSG00000135218|ENST00000447544|CD36;;nc|ENSG00000135218|P16671-3|CD36;;nc|ENSG00000135218|P16671-2|CD36 5.388654947280884 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11065 59.733 206.0 375410.0 25 0 20116.0 + 23218 LSSRGVPFP 9 101 480.2704129452954 958.5262729573908 2 480.2703735232353 MULTI CID FTMS 0 0 0 11055 259980.984375 1.0 0 0.0 10 Unmodified _LSSRGVPFP_ REV__ENSG00000134686|ENST00000683057|PHC2;REV__nc|ENSG00000134686|Q8IXK0-2|PHC2;REV__nc|ENSG00000134686|Q8IXK0-4|PHC2;REV__nc|ENSG00000134686|Q8IXK0|PHC2 24.99096001346401 0.2132109383330889 4 {[TV]|[{I|L}S]}[RK]DPM{I|L} 8 -1 + 43.355 0.0 0.0 4.523 4.523 84.607 0.0 0.0 0.0 0.2456819149073723 29.85969638019703 0.2456819149073723 43.35454640187712 0 1.16944517631652 0.8538719643217619 0.4247425010840047 0.0 {[TV]|[{I|L}S]}[RK]DPM{I|L} 4.523 - 218 1 1.459 66416.5 1.0 6371 4692 11055 HBL1_DMSO_200M_050219_2,11065 HBL1_DMSO_200M_050219_2,11065,LSSRGVPFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11066 59.736 131.0 640760.0 25 0 35937.0 + 4586 DAYSKRFISV 10 103 593.3167377035044 1184.6189224738089 2 593.3166381716728 MULTI CID FTMS 0 0 0 11055 247132.390625 0.3067464077454798 -2 0.1805801391601562 11 Unmodified _DAYSKRFISV_ ENSG00000186635|ENST00000393609|ARAP1;ENST00000465814.5_1_11:72407932-72423670:-|nuORF;nc|ENSG00000186635|Q96P48-1|ARAP1;nc|ENSG00000186635|Q96P48-2|ARAP1;nc|ENSG00000186635|Q96P48-3|ARAP1;nc|ENSG00000186635|Q96P48-4|ARAP1;nc|ENSG00000186635|Q96P48-7|ARAP1 40.714236015149055 0.1500248939241792 4 {[DA]|[EG]}YS[RV]{M(Oxidation (M))|F}KTV 10 3 + 45.815 0.0 0.0 3.8675 3.8675 78.925 0.0 0.0 0.0 15.514159134890598 1.6681770962370095 1.6681770962370095 11.394615430168995 0 0.7302046884880937 1.5228787452803376 0.3252574989159953 0.3252574989159953 {[DA]|[EG]}YS[RV]{M(Oxidation (M))|F}KTV;WW[YR]{M(Oxidation (M))|F}KTV;{[DA]|[EG]}[RV]{I|L}EGVAA{[QG]|[NA]};{[DA]|[EG]}[RV]{I|L}E[PS]{I|L}W;V[{M(Oxidation (M))|F}V]VGE[HA]KTV;[MT]{I|L}VGE[HA]KTV;{[DA]|[EG]}[RV]{I|L}ERAA{[QG]|[NA]};{[DA]|[EG]}[RV]{I|L}EG[Q{I|L}]{[QG]|[NA]};V[YQ]Y{[RE]|[WV]}KTV;V[WK]{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}KTV 3.8675;2.9056;2.5443;2.5433;2.3382;2.3382;1.9862;1.9862;0.95227;0.88543 -;-;-;-;-;-;-;-;-;- 350 + 1 1.459 67303.6 1.0 6372 4692 11055 HBL1_DMSO_200M_050219_2,11066 HBL1_DMSO_200M_050219_2,11066,DAYSKRFISV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11067 59.741 253.0 362620.0 25 0 35974.0 + -1 DCFHSLQTL 9 108 560.7603241694658 1119.5060954057317 2 561.7578613162041 MULTI CID FTMS 0 0 0 11055 218999.21875 1.0 0 0.0 12 Carbamidomethyl (C) _DC(Carbamidomethyl (C))FHSLQTL_ REV__ENSG00000184058|ENST00000649276|TBX1 11.640296217721598 0.521594087909532 4 [R{M(Oxidation (M))|F}]KE 4 -1 25.49 0.0 0.0 2.2769 0.0 0.0 0.0 556.1749465438661 556.1749465438661 0.0565842292838425 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.8807196863200843 [R{M(Oxidation (M))|F}]KE 2.2769 - 151 1 1.459 76439.4 1.0 6373 4692 11055 HBL1_DMSO_200M_050219_2,11067 HBL1_DMSO_200M_050219_2,11067,DCFHSLQTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11068 59.754 800.0 463830.0 25 0 31632.0 + + 15161 AMNMGRPF 8 215 462.2815753592236 922.5485977852472 2 462.2821533083916 MULTI CID FTMS 0 0 0 11055 187776.28125 0.8920558608908294 -4 0.3981971740722656 13 Unmodified _IPAPQSIVV_ nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-5|LARP4;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4;ENSG00000161813|ENST00000398473|LARP4 37.97399986684836 0.0865783450051559 4 [PG]AAP{I|L}S{I|L}VV 10 -1 + 44.198 0.0 0.0 4.7908 4.7908 71.108 0.0 0.0 0.0 2.311001422970349 16.532125137753432 2.311001422970349 2.218487496163569 0 0.7302046884880937 1.6989700043360187 1.0 0.0 [PG]AAP{I|L}S{I|L}VV;[PG]AAPVT{I|L}VV;[QP]APVT{I|L}VV;[QP]AP{I|L}S{I|L}VV;[{I|L}P][TA]NP{I|L}VV;[TP]N[{I|L}A]P{I|L}VV;[PG]AAPS{I|L}{I|L}VV;[PA]QPVT{I|L}VV;[PG]AS[{I|L}A]P{I|L}VV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V{I|L}S{I|L}VV 4.7908;4.5504;4.5403;4.3681;4.2305;4.191;4.1382;3.9361;3.8825;3.8051 -;-;-;-;-;-;-;-;-;- 2055 1 1.459 283058.2 0.9100000262260436 6374 4692 11055 HBL1_DMSO_200M_050219_2,11068 HBL1_DMSO_200M_050219_2,11068,IPAPQSIVV False False AMNMGRPF 59.754315 462.282153308392 2348989.75 11055.0 nc|ENSG00000161813|Q71RC2-4|LARP4;;nc|ENSG00000161813|Q71RC2-3|LARP4;;nc|ENSG00000161813|Q71RC2-2|LARP4;;nc|ENSG00000161813|Q71RC2-5|LARP4;;ENST00000521120.1_1_12:50835423-50848201:+|nuORF;;nc|ENSG00000161813|Q71RC2-6|LARP4;;nc|ENSG00000161813|Q71RC2-7|LARP4;;ENSG00000161813|ENST00000398473|LARP4 2.8559425274531045 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11069 59.758 221.0 302800.0 25 0 21252.0 -1 VPASITDM 8 104 425.2037393231112 0 425.2034484744072 PEAK CID FTMS 0 0 0 11055 156557.6875 1.0 0 0.0 14 Oxidation (M) _VPASITDM(Oxidation (M))_ ENSG00000198870|ENST00000371957|STKLD1 15.768221252438446 0.4767174489346095 4 E 1 -1 4.6041 0.0 0.0 0.54268 0.0 0.0 650.2916511542319 66.03578363590077 716.3274347901327 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.54268 - 41 + 1 1.459 58050.2 1.0 6375 4692 11055 HBL1_DMSO_200M_050219_2,11069 HBL1_DMSO_200M_050219_2,11069,VPASITDM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11070 59.772 800.0 214940.0 25 0 13695.0 + -1 VYQVGGVTAY 10 208 528.7769338764687 0 528.7740356326103 PEAK CID FTMS 0 0 0 11055 168317.609375 0.2564327873216927 3 -0.337371826171875 15 Oxidation (M) _FLVPM(Oxidation (M))LSYA_ ENSG00000155287|ENST00000370495|SLC25A28;nc|ENSG00000155287|Q96A46-3|SLC25A28;nc|ENSG00000155287|Q96A46-2|SLC25A28 30.22481116460888 0.1097735003385577 4 VWDY{M(Oxidation (M))|F} 5 -1 15.438 0.0 0.0 1.4626 0.0 0.0 260.1513370421296 82.06701837711171 342.2183554192413 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.0 VWDY{M(Oxidation (M))|F} 1.4626 - 384 + 1 1.459 132695.6 0.9399999976158142 6376 4692 11055 HBL1_DMSO_200M_050219_2,11070 HBL1_DMSO_200M_050219_2,11070,FLVPMLSYA False False VYQVGGVTAY 59.77233 528.77403563261 1551163.875 11055.0 ENSG00000155287|ENST00000370495|SLC25A28;;nc|ENSG00000155287|Q96A46-3|SLC25A28;;nc|ENSG00000155287|Q96A46-2|SLC25A28 1.4742442816495895 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11071 59.787 800.0 280230.0 25 0 31508.0 + 37701 TLPERPLTEV 10 197 577.824564132405 1153.63457533161 2 577.8239013552666 MULTI CID FTMS 0 0 0 11055 149080.671875 0.4215703818308169 -2 0.1805801391601562 16 Unmodified _TLPERPLTEV_ ENSG00000204569|ENST00000376511|PPP1R10 51.41523569358685 0.0718446036348414 4 [{I|L}T]V{M(Oxidation (M))|F}T 5 7 52.971 0.0 0.0 4.5917 0.0 0.0 0.0 589.3117277737655 589.3117277737655 27.512422313684525 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.3494850021680094 0.0 [{I|L}T]V{M(Oxidation (M))|F}T 4.5917 - 1361 + 1 1.459 170249.8 0.9700000286102296 6377 4692 11055 HBL1_DMSO_200M_050219_2,11071 HBL1_DMSO_200M_050219_2,11071,TLPERPLTEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11072 59.793 295.0 375760.0 25 0 18961.0 + 32026 RVIEPFSRV 9 146 368.2174604206507 1101.630551862152 3 368.2170287966728 MULTI CID FTMS 0 0 0 11055 140857.71875 0.6979024591073897 1 -0.1340179443359375 17 Unmodified _RVIEPFSRV_ ENSG00000108671|ENST00000261712|PSMD11;ENST00000493026.2_1_17:30804487-30806484:+|nuORF;nc|ENSG00000108671|O00231-2|PSMD11 20.41453444215458 0.284085796332423 4 [RV]{I|L}E 4 5 33.293 0.0 0.0 3.0222 0.0 0.0 0.0 601.310633885642 601.310633885642 21.699536209249985 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.2887254899964357 0.0 + [RV]{I|L}E 3.0222 + + 138 1 1.459 95665.9 1.0 6378 4692 11055 HBL1_DMSO_200M_050219_2,11072 HBL1_DMSO_200M_050219_2,11072,RVIEPFSRV False True RVIEPFSRV 59.792732 368.217028796673 1743829.625 11055.0 ENSG00000108671|ENST00000261712|PSMD11;;nc|ENSG00000108671|O00231-2|PSMD11;;ENST00000493026.2_1_17:30804487-30806484:+|nuORF 1.9577165842056277 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11073 59.807 800.0 133320.0 25 0 9017.9 + 19214 RSYDDQLAQI 10 128 604.8000650220521 1207.585577110904 2 604.7992431521416 MULTI CID FTMS 0 0 0 11055 118811.796875 1.0 0 0.0 18 Unmodified _LEGHSPQEAQI_ ENST00000476623.1_1_7:23347480-23349159:+|nuORF;ENSG00000156928|ENST00000466681|MALSU1 28.49450938151212 0.4231428536161201 4 {[QN]|[E{I|L}]|[KN]}AC(Carbamidomethyl (C))YQ{I|L}AQ{I|L} 10 5 + 66.699 0.0 0.0 5.5233 5.5233 54.717 0.0 0.0 0.0 10.210807888553228 16.53212513775344 10.210807888553228 0.0 0 0.6307196863200843 0.958607314841775 0.2396518287104437 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}AC(Carbamidomethyl (C))YQ{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))AYQ{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}Y[QA]C(Carbamidomethyl (C)){I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}Y{[QC]|[C(Carbamidomethyl (C))A]}Q{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}A[YQ]C(Carbamidomethyl (C)){I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}AC(Carbamidomethyl (C))YQ{I|L}A[AG]{I|L};{[QN]|[E{I|L}]|[KN]}AC(Carbamidomethyl (C))Y[AG]{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}A[CG]YQ{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}[CG]AYQ{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))AYQ{I|L}A[AG]{I|L} 5.5233;5.5233;5.1588;5.0655;5.0129;4.7644;4.7644;4.7644;4.7644;4.7644 -;-;-;-;-;-;-;-;-;- 2452 1 1.459 82011.9 0.8700000047683716 6379 4692 11055 HBL1_DMSO_200M_050219_2,11073 HBL1_DMSO_200M_050219_2,11073,LEGHSPQEAQI False False RSYDDQLAQI 59.806565 604.799243152142 1043914.375 11055.0 ENST00000476623.1_1_7:23347480-23349159:+|nuORF;;ENSG00000156928|ENST00000466681|MALSU1 6.8823622067769366 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11074 59.822 800.0 168470.0 25 0 13684.0 + 22201 LPQNLPRV 8 166 468.7849748816311 0 468.7535888552666 PEAK CID FTMS 0 0 0 11055 33481.80078125 1.0 0 0.0 19 Unmodified _LPQNLPRV_ ENST00000485611.5_1_7:32919436-32931738:-|nuORF;ENST00000423022.1_1_7:32919436-32930752:-|nuORF;ENST00000453627.1_1_7:32919436-32933460:-|nuORF;ENST00000424468.1_1_7:32919436-32932159:-|nuORF;ENST00000304056.8_1_7:32919436-32931464:-|nuORF 19.438996006549623 0.4285751805470146 4 PEE 3 7 15.846 0.0 0.0 1.6938 0.0 0.0 112.0958181167975 465.3007906549438 577.3966087717413 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 PEE 1.6938 - 182 + 1 1.459 105368.0 0.7699999809265137 6380 4692 11055 HBL1_DMSO_200M_050219_2,11074 HBL1_DMSO_200M_050219_2,11074,LPQNLPRV False False LPQNLPRV 59.821552 468.753588855267 237907.609375 11055.0 ENST00000485611.5_1_7:32919436-32931738:-|nuORF;;ENST00000423022.1_1_7:32919436-32930752:-|nuORF;;ENST00000453627.1_1_7:32919436-32933460:-|nuORF;;ENST00000424468.1_1_7:32919436-32932159:-|nuORF;;ENST00000304056.8_1_7:32919436-32931464:-|nuORF 1.295533835887909 2.0 True 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11075 59.835 800.0 228630.0 25 0 13797.0 + 3167 AVTEILNNA 9 183 472.75725482324566 0 472.7573425173759 PEAK CID FTMS 0 0 0 11055 92383.6796875 1.0 0 0.0 20 Unmodified _AVTEILNNA_ ENSG00000095261|ENST00000210313|PSMD5;ENST00000471789.1_1_9:123594085-123605145:-|nuORF;nc|ENSG00000095261|Q16401-2|PSMD5 32.30548876998284 0.0995446103270859 4 KT 2 8 21.108 0.0 0.0 2.2372 0.0 0.0 472.2338804019215 239.1043642633422 711.3382446652637 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.5891368308784531 0.0 KT 2.2372 - 233 + 1 1.459 141183.2 0.6600000262260437 6381 4692 11055 HBL1_DMSO_200M_050219_2,11075 HBL1_DMSO_200M_050219_2,11075,AVTEILNNA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11077 59.841 72.0 765420.0 25 0 87519.0 + 27310 PHNQFIKMM 9 96 382.5247055208697 1144.552287162809 3 382.5245849490166 MULTI CID FTMS 0 0 0 11076 608112.25 0.411543352073541 1 -0.092926025390625 1 Unmodified _PHNQFIKMM_ ENSG00000162511|ENST00000294507|LAPTM5 30.22481116460888 0.1466181017706357 4 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}HP{I|L} 6 6 20.908 0.0 0.0 1.8267 0.0 0.0 0.0 405.1625848773321 405.1625848773321 2.140012553530962 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}HP{I|L} 1.8267 - 188 1 1.452 48808.4 1.0 6382 4693 11076 HBL1_DMSO_200M_050219_2,11077 HBL1_DMSO_200M_050219_2,11077,PHNQFIKMM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11078 59.843 151.0 652330.0 25 0 56552.0 + 15501 IPTKDVPIV 9 110 491.3025895665872 980.5906261999744 2 491.3027526736259 MULTI CID FTMS 0 0 0 11076 580557.0625 0.5220952509852118 2 -0.2033538818359375 2 Unmodified _IPTKDVPIV_ ENSG00000159023|ENST00000343067|EPB41;ENST00000462032.1_1_1:29424324-29436027:+|nuORF;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41 39.94969957227396 0.0757326808254658 4 TP{I|L}P{I|L}V 6 5 33.229 0.0 0.0 3.3886 0.0 0.0 342.19200331855626 0.0 342.19200331855626 0.0 15.78131590713106 0.0 0.0 0 1.055462187404089 0.0 0.2742275032520141 0.0 TP{I|L}P{I|L}V 3.3886 - 468 1 1.452 78044.5 1.0 6383 4693 11076 HBL1_DMSO_200M_050219_2,11078 HBL1_DMSO_200M_050219_2,11078,IPTKDVPIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11079 59.845 28.0 2002500.0 25 0 434740.0 + 36986 TFASRVSSL 9 81 484.26501871175697 966.515484490314 2 484.2642700076103 MULTI CID FTMS 0 0 0 11076 1919314.375 0.5575674736054 1 -0.092926025390625 3 Unmodified _TFISSGRSL_ ENSG00000158195|ENST00000618852|WASF2;nc|ENSG00000158195|Q9Y6W5-2|WASF2 29.081581746732265 0.1611639662936252 4 T{M(Oxidation (M))|F}R[WR]T 6 6 33.148 0.0 0.0 3.4297 0.0 0.0 0.0 116.05115686588124 116.05115686588124 19.12530201418295 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 T{M(Oxidation (M))|F}R[WR]T 3.4297 - 71 + 1 1.452 47109.4 1.0 6384 4693 11076 HBL1_DMSO_200M_050219_2,11079 HBL1_DMSO_200M_050219_2,11079,TFISSGRSL False False TFASRVSSL 59.844673 484.26427000761 51187384.0 11076.0 ENSG00000158195|ENST00000618852|WASF2;;nc|ENSG00000158195|Q9Y6W5-2|WASF2 4.126275658607483 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11080 59.856 626.0 389280.0 25 0 105890.0 -1 0 73 1190.498859024644 3568.474747674132 3 1190.833666980267 MULTI CID FTMS 0 0 0 11076 532620.375 0.5747120716075069 -1 0.1340179443359375 4 4 RE 2 -1 12.391 0.0 0.0 0.34723 0.0 0.0 2756.1418141797944 524.1630444725554 3280.30485865235 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 RE 0.34723 - 53 + 1 1.452 193334.3 1.0 6385 4693 11076 HBL1_DMSO_200M_050219_2,11080 HBL1_DMSO_200M_050219_2,11080, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11081 59.857 53.0 1251600.0 25 0 175310.0 43829 YFHCDNGY 8 108 509.689848578985 1017.36514422477 2 509.6898376345634 MULTI CID FTMS 0 0 0 11076 526327.0625 1.0 0 0.0 5 Unmodified _YFHCDNGY_ ENSG00000099994|ENST00000358321|SUSD2;ENST00000463101.1_1_22:24583504-24584401:+|nuORF 8.593279151180031 0.7721714526254883 4 WY 2 7 22.959 0.0 0.0 2.2567 0.0 0.0 650.2152856816044 0.0 650.2152856816044 0.0 9.859856381998782 0.0 0.0 0 0.5 0.0 0.0 0.0 WY 2.2567 - 193 + 1 1.452 54582.3 1.0 6386 4693 11076 HBL1_DMSO_200M_050219_2,11081 HBL1_DMSO_200M_050219_2,11081,YFHCDNGY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11082 59.859 72.0 721250.0 25 0 73824.0 + 27112 PFKPPCSFYD 10 79 400.85246814256953 1199.5355750279086 3 400.8523742556572 MULTI CID FTMS 0 0 0 11076 511578.25 0.8778511722893707 -1 0.1340179443359375 6 Unmodified _PFKPPCSFYD_ REV__ENSG00000241973|ENST00000255882|PI4KA;REV__ENST00000360806.9_2_22:21827645-21842641:-|nuORF;REV__ENST00000462560.6_1_22:21830876-21842641:-|nuORF;REV__ENST00000467443.5_1_22:21831964-21846319:-|nuORF;REV__nc|ENSG00000183506|A4QPH2-2|PI4KAP2;REV__nc|ENSG00000183506|A4QPH2-4|PI4KAP2;REV__nc|ENSG00000183506|A4QPH2|PI4KAP2;REV__nc|ENSG00000241973|P42356-2|PI4KA;REV__nc|ENSG00000290425|Q8N8J0|PI4KAP1 6.723162845929126 0.6955379296933136 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}{[C(Carbamidomethyl (C))G]|[NC]}P{M(Oxidation (M))|F}VV 10 -1 + 19.221 0.0 0.0 1.6024 1.6024 44.371 0.0 0.0 0.0 0.6593871989765958 1.941224454521862 0.6593871989765958 0.0 0 0.0858955865873612 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}{[C(Carbamidomethyl (C))G]|[NC]}P{M(Oxidation (M))|F}VV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}PVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}[YN]SPVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}{[C(Carbamidomethyl (C))G]|[NC]}PV{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}[WQ]{M(Oxidation (M))|F}VV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[VG][W{M(Oxidation (M))|F}]M[WM];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}[WQ]V{M(Oxidation (M))|F}V;[WP]{[HG]|PP}QQM[WM];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}[WR][WM] 1.6024;1.6024;1.496;1.2707;1.0578;0.88208;0.7261;0.48433;0.19523 -;-;-;-;-;-;-;-;- 137 1 1.452 47189.2 1.0 6387 4693 11076 HBL1_DMSO_200M_050219_2,11082 HBL1_DMSO_200M_050219_2,11082,PFKPPCSFYD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11083 59.861 116.0 708400.0 25 0 73835.0 + 17965 KRGPMPGL 8 95 428.24815837719166 854.4817638211833 2 428.2498962283134 MULTI CID FTMS 0 0 0 11076 493062.34375 0.8542700304132789 2 -0.2033538818359375 7 Unmodified _KRGPMPGL_ ENST00000426279.1_1_X:44168653-44169127:-|nuORF 10.183394434864962 0.7604730176254005 4 AAAT{I|L}AA 7 8 46.762 0.0 0.0 5.4726 0.0 0.0 0.0 282.1401249874521 282.1401249874521 34.772526009870646 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.7059771852360797 0.0 AAAT{I|L}AA 5.4726 - 276 1 1.452 71373.1 1.0 6388 4693 11076 HBL1_DMSO_200M_050219_2,11083 HBL1_DMSO_200M_050219_2,11083,KRGPMPGL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11084 59.866 251.0 438290.0 25 0 30256.0 + 30259 QYFTARTSL 9 139 543.7830213737975 1085.551489814395 2 543.7825805544853 MULTI CID FTMS 0 0 0 11076 378741.5 1.0 0 0.0 8 Unmodified _QYFTARTSL_ ENST00000478619.1_1_3:50374315-50374750:-|nuORF;nc|ENSG00000068028|Q9NS23-4|RASSF1;nc|ENSG00000068028|Q9NS23-9|RASSF1 53.40400417844725 0.0329064971918313 4 QY{M(Oxidation (M))|F}TA 5 4 63.007 0.0 0.0 5.8042 0.0 0.0 0.0 472.25312219791255 472.25312219791255 34.28599666193386 0.0 0.0 0.0 0 0.632470911712249 1.5228787452803376 0.6505149978319906 0.0 + QY{M(Oxidation (M))|F}TA 5.8042 + + 768 + 1 1.452 88677.2 1.0 6389 4693 11076 HBL1_DMSO_200M_050219_2,11084 HBL1_DMSO_200M_050219_2,11084,QYFTARTSL True True QYFTARTSL 59.865794 543.782580554485 3189414.0 11076.0 nc|ENSG00000068028|Q9NS23-9|RASSF1;;ENST00000478619.1_1_3:50374315-50374750:-|nuORF;;nc|ENSG00000068028|Q9NS23-4|RASSF1 5.953889052073161 2.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 11085 59.869 179.0 400420.0 25 0 57936.0 19570 LFSSSLVA 8 106 412.2305183968352 822.4464838604704 2 412.2307006716728 MULTI CID FTMS 0 0 0 11076 313020.5625 0.5445026081244498 -2 0.1990280151367187 9 Unmodified _LFSSSLVA_ ENSG00000157954|ENST00000288828|WIPI2;ENST00000465102.5_1_7:5254197-5262304:+|nuORF;ENST00000466014.5_1_7:5232953-5270575:+|nuORF;ENST00000475309.5_1_7:5254056-5256899:+|nuORF;nc|ENSG00000157954|Q9Y4P8-2|WIPI2;nc|ENSG00000157954|Q9Y4P8-3|WIPI2;nc|ENSG00000157954|Q9Y4P8-4|WIPI2;nc|ENSG00000157954|Q9Y4P8-5|WIPI2;nc|ENSG00000157954|Q9Y4P8-6|WIPI2 5.760428011301431 0.7893668129297577 4 V 1 7 8.8735 0.0 0.0 1.0789 0.0 0.0 705.3671361815626 0.0 705.3671361815626 0.0 5.858069188646088 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.0789 + + 28 + 1 1.452 60991.2 1.0 6390 4693 11076 HBL1_DMSO_200M_050219_2,11085 HBL1_DMSO_200M_050219_2,11085,LFSSSLVA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11086 59.872 128.0 794380.0 25 0 93629.0 -1 0 129 325.1858977909566 648.3572426487132 2 325.1856262087822 MULTI CID FTMS 0 0 0 11076 302342.25 0.7192469658778625 -1 0.1340179443359375 10 4 {I|L} 1 -1 8.6292 0.0 0.0 1.3309 0.0 0.0 517.262178417071 0.0 517.262178417071 0.0 1.0435786717253706 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3309 - 19 + 1 1.452 85877.7 1.0 6391 4693 11076 HBL1_DMSO_200M_050219_2,11086 HBL1_DMSO_200M_050219_2,11086, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11087 59.876 208.0 643740.0 25 0 79290.0 + 16917 KIIYIVHDEV 10 133 614.8506282240672 1227.6867035149344 2 614.8508788943291 MULTI CID FTMS 0 0 0 11076 306627.875 0.0467289685799875 -3 0.3145980834960937 11 Unmodified _KIIYIVHDEV_ ENSG00000100567|ENST00000216455|PSMA3;nc|ENSG00000100567|P25788-2|PSMA3 80.89551112106177 0.0163339094631175 4 K{I|L}{I|L}Y{I|L}VV 7 3 68.882 0.0 0.0 5.6107 0.0 0.0 0.0 396.1177157037719 396.1177157037719 20.009737581269547 0.0 0.0 0.0 0 2.193672679568534 0.7695510786217261 0.0 0.0 K{I|L}{I|L}Y{I|L}VV 5.6107 - 3407 + 1 1.452 110770.2 1.0 6392 4693 11076 HBL1_DMSO_200M_050219_2,11087 HBL1_DMSO_200M_050219_2,11087,KIIYIVHDEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11088 59.88 238.0 486930.0 25 0 52068.0 + 8091 EPFADFHRV 9 124 559.2749442126963 1116.5353354921924 2 559.2750732302666 MULTI CID FTMS 0 0 0 11076 300327.46875 0.4291251810518838 -2 0.1990280151367187 12 Unmodified _EPFADFHRV_ ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF 70.33199760932243 0.0209706178985989 4 EP{M(Oxidation (M))|F}AD{M(Oxidation (M))|F}HVR 9 2 + 93.744 0.0 0.0 8.3959 8.3959 90.435 0.0 0.0 0.0 64.03286972767879 21.8348435778082 21.8348435778082 7.7815125038364386 0 0.8199601741485107 1.5228787452803376 0.0 1.075257498915995 EP{M(Oxidation (M))|F}AD{M(Oxidation (M))|F}HVR;EP{M(Oxidation (M))|F}AD{M(Oxidation (M))|F}VHR;E{I|L}MAD{M(Oxidation (M))|F}HVR;EP{M(Oxidation (M))|F}ADV{M(Oxidation (M))|F}HR;E{I|L}MAD{M(Oxidation (M))|F}VHR;EP{M(Oxidation (M))|F}AV{M(Oxidation (M))|F}DHR;EP{M(Oxidation (M))|F}AVD{M(Oxidation (M))|F}HR;E{I|L}MADV{M(Oxidation (M))|F}HR;EP{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}HVR;EP{M(Oxidation (M))|F}VA{M(Oxidation (M))|F}DHR 8.3959;7.699;7.2907;6.9804;6.5938;6.2535;6.0958;5.8752;5.7536;5.5171 -;-;-;-;-;-;-;-;-;- 1809 + 1 1.452 90479.2 1.0 6393 4693 11076 HBL1_DMSO_200M_050219_2,11088 HBL1_DMSO_200M_050219_2,11088,EPFADFHRV True True EPFADFHRV 59.880317 559.275073230267 7006397.0 11076.0 ENST00000532451.1_1_11:121323091-121416136:+|nuORF;;ENSG00000137642|ENST00000260197|SORL1 9.90725803375244 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11089 59.884 164.0 588160.0 25 0 57759.0 + 36860 TELWETCGL 9 120 526.2437485520745 1050.472944170949 2 526.2446166872978 MULTI CID FTMS 0 0 0 11076 183585.984375 0.6583078207251688 -2 0.1990280151367187 13 Unmodified _TELWETCGL_ REV__ENST00000486860.5_1_7:87839356-87839401:-|nuORF 23.1484247019978 0.2366544122328345 4 {I|L}{[C(Carbamidomethyl (C))E]|[WC]}T{I|L} 5 -1 25.49 0.0 0.0 2.4265 0.0 0.0 416.1793173172365 0.0 416.1793173172365 0.0 5.607346925073955 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 {I|L}{[C(Carbamidomethyl (C))E]|[WC]}T{I|L} 2.4265 - 900 + 1 1.452 80558.8 1.0 6394 4693 11076 HBL1_DMSO_200M_050219_2,11089 HBL1_DMSO_200M_050219_2,11089,TELWETCGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11090 59.888 237.0 475080.0 25 0 46039.0 + 39062 TVVMYLHHV 9 130 366.8637545158265 1097.5694341476794 3 366.8634826540947 MULTI CID FTMS 0 0 0 11076 183923.0 0.8445578869464551 -1 0.1340179443359375 14 Unmodified _TVVMYLHHV_ ENSG00000051108|ENST00000439977|HERPUD1;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 24.67388899826682 0.2172451872415813 4 MY{I|L}HVH 6 5 25.347 0.0 0.0 2.3094 0.0 0.0 299.183256813339 0.0 299.183256813339 0.0 10.433571835664749 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 MY{I|L}HVH 2.3094 - 341 + 1 1.452 101061.6 1.0 6395 4693 11076 HBL1_DMSO_200M_050219_2,11090 HBL1_DMSO_200M_050219_2,11090,TVVMYLHHV False True TVVMYLHHV 59.887979 366.863482654095 2193412.25 11076.0 nc|ENSG00000051108|Q15011-4|HERPUD1;;nc|ENSG00000051108|Q15011-2|HERPUD1;;ENSG00000051108|ENST00000439977|HERPUD1 7.765347480773926 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11091 59.903 800.0 209220.0 25 0 12572.0 + -1 YPRISVNNV 9 220 531.2904601637276 530.2831836971276 1 531.2907592654228 MULTI CID FTMS 0 0 0 11076 178092.125 0.9761807329729932 -1 0.1340179443359375 15 ENSG00000117984|ENST00000236671|CTSD 4 [YV][H{I|L}] 4 -1 + 23.468 0.0 0.0 4.4255 4.4255 76.097 0.0 0.0 0.0 6.570137341235736 6.570137341235736 6.570137341235736 6.570137341235736 0 0.0 2.0 0.0 0.0 [YV][H{I|L}];[W{I|L}]NV;[W{I|L}]GGV 4.4255;3.1865;0.74026 -;-;- 178 1 1.452 135623.8 0.9200000166893004 6396 4693 11076 HBL1_DMSO_200M_050219_2,11091 HBL1_DMSO_200M_050219_2,11091, False False YPRISVNNV 59.902985 531.290759265423 2825776.0 11076.0 ENSG00000117984|ENST00000236671|CTSD 5.531863371531169 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11092 59.909 324.0 400860.0 25 0 36548.0 + 14840 ILGGPGTVQGV 11 168 499.2875991042045 996.560645275209 2 499.2901489138603 MULTI CID FTMS 0 0 0 11076 145437.3125 0.0631704711247322 9 -0.889862060546875 16 Unmodified _ILGGPGTVQGV_ ENSG00000173992|ENST00000533244|CCS;ENST00000526066.5_1_11:66366934-66367108:+|nuORF 39.94969957227396 0.2131707853268865 4 {I|L}{I|L}[HV]DV 6 7 19.666 0.0 0.0 1.9734 0.0 0.0 0.0 317.1430176719465 317.1430176719465 0.8927186071611715 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}[HV]DV 1.9734 - 878 1 1.452 100100.7 1.0 6397 4693 11076 HBL1_DMSO_200M_050219_2,11092 HBL1_DMSO_200M_050219_2,11092,ILGGPGTVQGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11093 59.923 800.0 111340.0 25 0 10677.0 -1 0 88 1041.8940067849642 2081.7734606367285 2 1042.396777331829 MULTI CID FTMS 0 0 0 11076 137866.21875 0.98460442136076 -1 0.1340179443359375 17 4 [YQ]{I|L}E 4 -1 30.974 0.0 0.0 1.4879 0.0 0.0 0.0 1545.500181177997 1545.500181177997 5.386858533908416 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.3807196863200844 [YQ]{I|L}E 1.4879 - 343 1 1.452 68592.0 0.6800000071525574 6398 4693 11076 HBL1_DMSO_200M_050219_2,11093 HBL1_DMSO_200M_050219_2,11093, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11094 59.928 302.0 186330.0 25 0 24187.0 + 38359 TQNPNYYNL 9 102 563.7627824962397 1125.5110120592792 2 563.7646972537041 MULTI CID FTMS 0 0 0 11076 126990.9921875 0.810599934373451 -1 0.1340179443359375 18 Unmodified _TQNPNYYNL_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 62.57269311338072 0.0246576765497938 4 [QT]N[NP]YY{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 39.402 0.0 0.0 3.5008 3.5008 71.836 0.0 0.0 0.0 5.580371765640429 7.147642715192511 5.580371765640429 5.580371765640429 0 0.0 0.0 0.6549471895720984 1.4489700043360187 + + [QT]N[NP]YY{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}YYYY{[QV]|[N{I|L}]|[RA]|[KV]};{[SA]|[TG]}AN[NP]YY{[QV]|[N{I|L}]|[RA]|[KV]};[QT]GG[NP]YY{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}N[QT]Y{[QV]|[N{I|L}]|[RA]|[KV]};[YN]PN[QT]Y{[QV]|[N{I|L}]|[RA]|[KV]};[NP]YN[QT]Y{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}NY[QT]{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}GG[QT]Y{[QV]|[N{I|L}]|[RA]|[KV]};{[SA]|[TG]}AGG[NP]YY{[QV]|[N{I|L}]|[RA]|[KV]} 3.5008;3.005;2.9252;2.6826;2.6615;2.1188;2.1188;1.8602;1.8434;1.822 +;-;-;-;-;-;-;-;-;- + 1149 1 1.452 48658.8 1.0 6399 4693 11076 HBL1_DMSO_200M_050219_2,11094 HBL1_DMSO_200M_050219_2,11094,TQNPNYYNL True True TQNPNYYNL 59.928271 563.764697253704 2143498.0 11076.0 ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 6.847550710042317 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11096 59.933 7.6 6799100.0 25 0 650300.0 + 41502 VPMTPLRTV 9 70 507.2946614967139 0 507.2946960330009 PEAK CID FTMS 0 0 0 11095 5849306.5 0.9127667594288088 1 -0.1104278564453125 1 Unmodified _VPMTPLRTV_ ENSG00000107949|ENST00000278100|BCCIP 24.95707706330732 0.15613375446465 4 PMTP{I|L} 5 4 31.638 0.0 0.0 3.1245 0.0 0.0 99.06845641953916 371.2069796197876 470.2754360393267 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 + PMTP{I|L} 3.1245 + + 101 + 1 1.45 48532.4 1.0 6400 4694 11095 HBL1_DMSO_200M_050219_2,11096 HBL1_DMSO_200M_050219_2,11096,VPMTPLRTV False True VPMTPLRTV 59.932666 507.294696033001 103518776.0 11095.0 ENSG00000107949|ENST00000278100|BCCIP 6.787844657897949 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11097 59.934 13.0 2352800.0 25 0 172800.0 + 43105 VYNYAEQTL 9 69 550.7668724451122 1099.5191919570243 2 550.7669555544853 MULTI CID FTMS 0 0 0 11095 3520366.0 0.619835236047278 1 -0.1104278564453125 2 Unmodified _VYNYAEQTL_ ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 23.1484247019978 0.2366544122328345 4 [YV]NAY 5 5 31.427 0.0 0.0 2.8582 0.0 0.0 0.0 486.2203998029806 486.2203998029806 11.720449851406514 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YV]NAY 2.8582 - 174 1 1.45 29836.5 1.0 6401 4694 11095 HBL1_DMSO_200M_050219_2,11097 HBL1_DMSO_200M_050219_2,11097,VYNYAEQTL False True VYNYAEQTL 59.933845 550.766955554485 100192760.0 11095.0 ENSG00000173933|ENST00000310092|RBM4;;nc|ENSG00000239306|Q96PK6-5|RBM14 6.559493859608968 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11098 59.935 36.0 1700100.0 25 0 110350.0 + 41158 VPAPPPAWPV 10 85 515.787589036681 1029.5606251401618 2 515.7882568240166 MULTI CID FTMS 0 0 0 11095 1241343.25 0.3828160205682814 3 -0.2856903076171875 3 Unmodified _VPAPPPAWPV_ REV__ENSG00000148840|ENST00000278070|PPRC1;REV__nc|ENSG00000148840|Q5VV67-2|PPRC1 32.116972079565 0.2470863257317063 4 {I|L}PN{M(Oxidation (M))|F} 4 -1 49.412 0.0 0.0 4.7994 0.0 0.0 0.0 555.2908152418034 555.2908152418034 18.97940008672037 0.0 0.0 0.0 0 0.6505149978319906 1.0969100130080565 0.0 0.0 {I|L}PN{M(Oxidation (M))|F} 4.7994 - 144 + 1 1.45 56485.3 1.0 6402 4694 11095 HBL1_DMSO_200M_050219_2,11098 HBL1_DMSO_200M_050219_2,11098,VPAPPPAWPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11099 59.936 39.0 1148300.0 25 0 118850.0 + 22153 LPPSALQSV 9 72 456.26346091798274 910.5123689027656 2 456.2643615603447 MULTI CID FTMS 0 0 0 11095 1161821.375 0.8259128224107727 -7 0.7432365417480469 4 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 34.10243960390752 0.1078313939113124 4 [{I|L}P]{[SA]|[TG]}P{I|L}QSV 9 2 + 43.891 0.0 0.0 4.8205 4.8205 72.707 0.0 0.0 0.0 13.128552861292276 20.42342188037523 13.128552861292276 3.0102999566398125 0 0.7742275032520141 1.5228787452803376 0.3807196863200844 0.0 [{I|L}P]{[SA]|[TG]}P{I|L}QSV;[{I|L}P]{[SA]|[TG]}PQ{I|L}SV;[{I|L}P]{[SA]|[TG]}P{I|L}[AG]SV;[{I|L}P]{[SA]|[TG]}P[AG]{I|L}SV 4.8205;4.4899;3.8092;3.4786 -;-;-;- 177 1 1.45 39747.1 1.0 6403 4694 11095 HBL1_DMSO_200M_050219_2,11099 HBL1_DMSO_200M_050219_2,11099,LPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11100 59.937 45.0 1044200.0 25 0 80513.0 + 45196 YQTEIGQTL 9 82 526.7663031035079 1051.5180532738157 2 526.7665893435478 MULTI CID FTMS 0 0 0 11095 984758.6875 0.145220419351875 -3 0.2919540405273437 5 Unmodified _YQTEIGQTL_ ENSG00000160752|ENST00000368356|FDPS;ENST00000453932.1_1_7:76099481-76100288:-|nuORF;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS 29.081581746732265 0.1611639662936252 4 {I|L}EC(Carbamidomethyl (C))T{I|L} 5 6 36.471 0.0 0.0 3.4684 0.0 0.0 417.2188722208844 0.0 417.2188722208844 0.0 20.27310937020445 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {I|L}EC(Carbamidomethyl (C))T{I|L} 3.4684 - 178 + 1 1.45 42236.7 1.0 6404 4694 11095 HBL1_DMSO_200M_050219_2,11100 HBL1_DMSO_200M_050219_2,11100,YQTEIGQTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11101 59.939 81.0 622930.0 25 0 101090.0 38973 TVPSGRPR 8 82 435.25113249996593 868.4877120667319 2 435.2510558962822 MULTI CID FTMS 0 0 0 11095 590286.8125 0.9483328396499702 -13 1.4548263549804688 6 Unmodified _TVPSGRPR_ ENST00000540643.5_2_22:32002357-32009472:+|nuORF 2.577480529830294 0.808687252328423 4 {I|L} 1 8 11.594 0.0 0.0 1.3349 0.0 0.0 737.3923884356757 0.0 737.3923884356757 0.0 4.6040937697618745 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3349 - 13 + 1 1.45 44094.6 1.0 6405 4694 11095 HBL1_DMSO_200M_050219_2,11101 HBL1_DMSO_200M_050219_2,11101,TVPSGRPR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11102 59.941 83.0 742370.0 25 0 83802.0 + 4588 DAYSKRFISV 10 90 395.8803536377197 1184.6192315133592 3 395.8800842165947 MULTI CID FTMS 0 0 0 11095 356300.1875 1.0 0 0.0 7 Unmodified _DAYSKRFISV_ ENSG00000186635|ENST00000393609|ARAP1;ENST00000465814.5_1_11:72407932-72423670:-|nuORF;nc|ENSG00000186635|Q96P48-1|ARAP1;nc|ENSG00000186635|Q96P48-2|ARAP1;nc|ENSG00000186635|Q96P48-3|ARAP1;nc|ENSG00000186635|Q96P48-4|ARAP1;nc|ENSG00000186635|Q96P48-7|ARAP1 9.764250979337303 0.6814711177547602 4 {[DA]|[EG]}YS 4 6 34.609 0.0 0.0 2.9215 0.0 0.0 0.0 745.4353121393186 745.4353121393186 21.84496837255775 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YS 2.9215 + + 83 + 1 1.45 55674.8 1.0 6406 4694 11095 HBL1_DMSO_200M_050219_2,11102 HBL1_DMSO_200M_050219_2,11102,DAYSKRFISV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11103 59.945 229.0 490390.0 25 0 67037.0 + 10549 FVEPSRQFV 9 82 554.7932220554766 1107.571891177753 2 554.7931396365166 MULTI CID FTMS 0 0 0 11095 346814.96875 0.5148786244218675 -2 0.2269439697265625 8 Unmodified _FVEPSRQFV_ ENSG00000132432|ENST00000352861|SEC61G;ENST00000460484.5_1_7:54823470-54826890:-|nuORF 47.594388314883695 0.0456443387682827 4 SPEVE 5 8 48.003 0.0 0.0 4.3341 0.0 0.0 548.3076039044937 0.0 548.3076039044937 0.0 29.61758134947864 0.0 0.0 0 0.9247425010840048 0.0 0.7302046884880937 0.0 SPEVE 4.3341 - 192 1 1.45 91670.1 1.0 6407 4694 11095 HBL1_DMSO_200M_050219_2,11103 HBL1_DMSO_200M_050219_2,11103,FVEPSRQFV True True FVEPSRQFV 59.945462 554.793139636517 11843687.0 11095.0 ENST00000460484.5_1_7:54823470-54826890:-|nuORF;;ENSG00000132432|ENST00000352861|SEC61G 5.17890214920044 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11104 59.948 135.0 376020.0 25 0 54046.0 + 24771 MPHNQFIKM 9 87 573.2832709501703 1144.5519889671405 2 573.2835571169853 MULTI CID FTMS 0 0 0 11095 295582.78125 0.1129681094921957 3 -0.2856903076171875 9 Unmodified _MPHNQFIKM_ ENSG00000162511|ENST00000294507|LAPTM5 37.97399986684836 0.0865783450051559 4 MPHRPH{M(Oxidation (M))|F} 7 5 38.078 0.0 0.0 3.3269 0.0 0.0 0.0 239.0801180475219 239.0801180475219 18.763896114411995 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 MPHRPH{M(Oxidation (M))|F} 3.3269 - 617 + 1 1.45 44078.0 1.0 6408 4694 11095 HBL1_DMSO_200M_050219_2,11104 HBL1_DMSO_200M_050219_2,11104,MPHNQFIKM True True MPHNQFIKM 59.948212 573.283557116985 40514764.0 11095.0 ENSG00000162511|ENST00000294507|LAPTM5 6.243604818979899 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11105 59.953 251.0 548490.0 25 0 33962.0 + 18122 DAYENLTAKV 10 138 561.8294084966179 1121.6442640600358 2 561.8298828005791 MULTI CID FTMS 0 0 0 11095 209125.953125 0.2747733622810323 -2 0.2269439697265625 10 Unmodified _KTLFSPFGII_ ENSG00000176022|ENST00000379198|B3GALT6 34.93206674587334 0.2110832994570416 4 KT{I|L}E 4 7 38.29 0.0 0.0 3.4137 0.0 0.0 0.0 647.3499239557249 647.3499239557249 12.88364391835536 0.0 0.0 0.0 0 0.6109243748081782 0.0 0.6747425010840047 0.0 KT{I|L}E 3.4137 - 1725 + 1 1.45 107890.7 1.0 6409 4694 11095 HBL1_DMSO_200M_050219_2,11105 HBL1_DMSO_200M_050219_2,11105,KTLFSPFGII False False DAYENLTAKV 59.952887 561.829882800579 3681454.0 11095.0 ENSG00000176022|ENST00000379198|B3GALT6 4.024600585301717 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11106 59.956 136.0 436080.0 25 0 78816.0 + 29706 QPISTQTLV 9 95 493.7794559043902 985.5443588755804 2 493.7794067263603 MULTI CID FTMS 0 0 0 11095 149369.859375 0.0379510599000128 -4 0.4075241088867187 11 Unmodified _QPISTQTLV_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4 30.63653989081413 0.1413794767160703 4 {[QN]|[E{I|L}]|[KN]}QRQT 6 6 32.722 0.0 0.0 3.3202 0.0 0.0 0.0 227.13497101841168 227.13497101841168 16.084138419179972 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.274227503252014 0.0 {[QN]|[E{I|L}]|[KN]}QRQT 3.3202 - 328 1 1.45 49471.4 1.0 6410 4694 11095 HBL1_DMSO_200M_050219_2,11106 HBL1_DMSO_200M_050219_2,11106,QPISTQTLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11107 59.962 364.0 335990.0 25 0 23444.0 + 45078 YPYIGHPQV 9 157 537.2751369979817 1072.5357210627633 2 537.2754394412041 MULTI CID FTMS 0 0 0 11095 133910.890625 0.8080530396308466 -2 0.2269439697265625 12 Unmodified _YPYIGHPQV_ nc|ENSG00000168488|Q8WWM7-4|ATXN2L 60.38955033654506 0.025866396858536 4 YPY{I|L}P 5 4 61.476 0.0 0.0 5.7318 0.0 0.0 0.0 436.1817721002563 436.1817721002563 33.49152995545663 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 YPY{I|L}P 5.7318 - 4021 + 1 1.45 98998.8 1.0 6411 4694 11095 HBL1_DMSO_200M_050219_2,11107 HBL1_DMSO_200M_050219_2,11107,YPYIGHPQV True True YPYIGHPQV 59.962197 537.275439441204 4322735.5 11095.0 nc|ENSG00000168488|Q8WWM7-4|ATXN2L 6.212398846944173 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11108 59.976 800.0 170780.0 25 0 19115.0 + 44368 YLSLCDCATAT 11 160 580.7522354633709 0 580.7520629763603 PEAK CID FTMS 0 0 0 11095 127875.046875 1.0 0 0.0 13 Unmodified _YLSLCDCATAT_ REV__ENSG00000132972|ENST00000255324|RNF17;REV__nc|ENSG00000132972|Q9BXT8-4|RNF17;REV__nc|ENSG00000132972|Q9BXT8-5|RNF17 13.042465956692816 0.4221659143281722 4 QD{I|L}S 4 -1 15.394 0.0 0.0 1.3276 0.0 0.0 393.22595422576666 320.03827844791255 713.2642326736792 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 QD{I|L}S 1.3276 - 362 + 1 1.45 102612.8 0.8999999761581421 6412 4694 11095 HBL1_DMSO_200M_050219_2,11108 HBL1_DMSO_200M_050219_2,11108,YLSLCDCATAT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11109 59.982 317.0 284290.0 25 0 18668.0 21795 LPNGRVYYV 9 142 540.7965866741428 1079.5786204150854 2 540.7961913943291 MULTI CID FTMS 0 0 0 11095 120441.25 0.9854098556709704 1 -0.1104278564453125 14 Unmodified _LPNGRVYYV_ ENSG00000198373|ENST00000359154|WWP2;nc|ENSG00000198373|O00308-2|WWP2;nc|ENSG00000198373|O00308-4|WWP2 50.855029805455786 0.0384952370514206 4 {I|L}PN{[NV]|[RG]}[YV]YV 9 0 + 47.065 0.0 0.0 4.3596 4.3596 70.285 0.0 0.0 0.0 29.440834170577904 2.526290382303109 2.526290382303109 2.7583965226536904 0 1.024227503252014 1.6989700043360187 0.0 0.3054621874040891 + + {I|L}PN{[NV]|[RG]}[YV]YV;{I|L}P{[TV]|[{I|L}S]}W{[QS]|[NT]}H{I|L};{I|L}PN{[NV]|[RG]}HHH{I|L};{I|L}PN{[VA]|[{I|L}G]}[WM]H{I|L};{I|L}PN{[NV]|[RG]}{[CP]|[EA]}QPV;{I|L}P{[TV]|[{I|L}S]}W[HN]T{I|L};{I|L}PN{[NV]|[RG]}[Y{M(Oxidation (M))|F}]T{I|L};{I|L}PN{[QS]|[NT]}S[KG]H{I|L};{I|L}PN{[QS]|[NT]}[TP]QPV;{I|L}PN{[NV]|[RG]}[HK]C(Carbamidomethyl (C))V 4.3596;4.1041;4.0833;3.9634;3.7135;3.5476;3.5267;3.5182;3.508;3.4782 +;-;-;-;-;-;-;-;-;- + 918 + 1 1.45 76148.4 1.0 6413 4694 11095 HBL1_DMSO_200M_050219_2,11109 HBL1_DMSO_200M_050219_2,11109,LPNGRVYYV True True LPHFTSEHI 59.981808 540.796191394329 401114.1875 11095.0 ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 4.0577012697855634 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11110 59.996 800.0 119740.0 25 0 40197.0 -1 0 51 1123.7952879427314 0 1123.797778308392 PEAK CID FTMS 0 0 0 11095 126647.3125 1.0 0 0.0 15 4 VK 2 -1 8.6278 0.0 0.0 0.38421 0.0 0.0 1023.9759996141756 991.3889254205686 2015.364925034744 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 VK 0.38421 - 13 + 1 1.45 74901.7 0.6399999856948853 6414 4694 11095 HBL1_DMSO_200M_050219_2,11110 HBL1_DMSO_200M_050219_2,11110, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11111 60.01 800.0 300790.0 25 0 12778.0 + 44830 YPNRGFPKI 9 198 546.3042286962449 1090.5939044592897 2 546.3043701052666 MULTI CID FTMS 0 0 0 11095 110113.8515625 0.5458020183088338 -2 0.2269439697265625 16 Unmodified _YPNRGFPKI_ ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR 58.6788170122104 0.0268135626297836 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{[NV]|[RG]}{M(Oxidation (M))|F}PK{I|L} 9 0 + 38.001 0.0 0.0 3.4844 3.4844 76.771 0.0 0.0 0.0 6.089509077214579 13.15185649578602 6.089509077214579 9.20818753952376 0 1.5356668758921828 1.5228787452803376 0.1923877696554315 0.3252574989159953 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{[NV]|[RG]}{M(Oxidation (M))|F}PK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GG{[NV]|[RG]}{M(Oxidation (M))|F}PK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM}[{I|L}V]PK{I|L};[KP]{I|L}[{M(Oxidation (M))|F}V]DPY{I|L};[QA]K{[ES]|[DT]|[{I|L}C]}PRY{I|L};[QA]K{[ES]|[DT]|[{I|L}C]}YPR{I|L};[{I|L}T]C(Carbamidomethyl (C)){[NV]|[RG]}{M(Oxidation (M))|F}PK{I|L};[QA][YC(Carbamidomethyl (C))][{I|L}V]PK{I|L};[K{I|L}][WC(Carbamidomethyl (C))]{M(Oxidation (M))|F}PK{I|L};[QA]K{[ES]|[DT]|[{I|L}C]}RPY{I|L} 3.4844;2.6401;2.5096;1.5491;1.4314;1.3951;1.2634;1.2489;1.1586;1.1554 +;-;-;-;-;-;-;-;-;- + 807 1 1.45 185952.1 0.8299999833106995 6415 4694 11095 HBL1_DMSO_200M_050219_2,11111 HBL1_DMSO_200M_050219_2,11111,YPNRGFPKI True True YPNRGFPKI 60.009507 546.304370105267 4864138.0 11095.0 ENSG00000116984|ENST00000366577|MTR;;nc|ENSG00000116984|Q99707-2|MTR 4.263072649637858 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11112 60.025 800.0 128750.0 25 0 12220.0 + + 23200 KAIDDSSASISL 12 133 603.81475459519 1205.61495625718 2 603.8147460818291 MULTI CID FTMS 0 0 0 11095 88505.9296875 0.8190131191645701 -1 0.092926025390625 17 Unmodified _LSSHTVCFLSL_ nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;ENSG00000122257|ENST00000319715|RBBP6 62.57269311338072 0.058704053366003 4 {[TV]|[{I|L}S]}{I|L}N{[C(Carbamidomethyl (C))E]|[WC]}AS{I|L}S{I|L} 11 -1 + 83.893 0.0 0.0 6.9585 6.9585 86.804 0.0 0.0 0.0 7.324638090735036 16.57577319177794 7.324638090735036 7.324638090735036 0 1.2614393726401687 1.3979400086720375 2.1549471895720984 0.0 {[TV]|[{I|L}S]}{I|L}N{[C(Carbamidomethyl (C))E]|[WC]}AS{I|L}S{I|L};[{I|L}T]VN{[C(Carbamidomethyl (C))E]|[WC]}AS{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}GG{[C(Carbamidomethyl (C))E]|[WC]}AS{I|L}S{I|L};[{I|L}P]D{[YD]|[{M(Oxidation (M))|F}M]}{I|L}AS{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}[KG]{[C(Carbamidomethyl (C))E]|[WC]}AS{I|L}S{I|L};[{I|L}P]D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MAS{I|L}S{I|L};[VP]Y[EP]MAS{I|L}S{I|L};[{I|L}T]VGG{[C(Carbamidomethyl (C))E]|[WC]}AS{I|L}S{I|L};[YV]P[EP]MAS{I|L}S{I|L};[VP]E{[YD]|[{M(Oxidation (M))|F}M]}{I|L}AS{I|L}S{I|L} 6.9585;6.3509;6.2013;6.1604;5.7398;5.7176;5.6529;5.5938;5.5624;5.516 -;-;-;-;-;-;-;-;-;- 872 1 1.45 78026.9 0.7799999713897705 6416 4694 11095 HBL1_DMSO_200M_050219_2,11112 HBL1_DMSO_200M_050219_2,11112,LSSHTVCFLSL False False KAIDDSSASISL 60.024799 603.814746081829 1168921.125 11095.0 nc|ENSG00000122257|Q7Z6E9-2|RBBP6;;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;;ENSG00000122257|ENST00000319715|RBBP6 1.8639741738637288 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11113 60.039 800.0 138600.0 25 0 8184.5 + 18503 KYPDYYQQI 9 144 609.2946883327547 1216.5748237323094 2 609.2982665896416 MULTI CID FTMS 0 0 0 11095 86875.0859375 0.0549750328564484 -6 0.6251411437988281 18 Unmodified _KYPDYYQQI_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 33.4449034751529 0.1114409586740657 4 [DP]YYKYQQ{I|L} 9 4 + 59.332 0.0 0.0 4.877 4.877 74.461 0.0 0.0 0.0 2.922152515121219 36.85341560360975 2.922152515121219 3.883126090256681 0 0.6109243748081782 0.0 0.0 0.7059771852360797 [DP]YYKYQQ{I|L};[AG]{I|L}Q[C(Carbamidomethyl (C))H]YQQ{I|L};[DP]YYKYQ[AG]{I|L};[DP]YYKY[AG]Q{I|L};[DP]YKYYQQ{I|L};[Q{I|L}]Q[C(Carbamidomethyl (C))H]YQQ{I|L};[AG]{I|L}Q[C(Carbamidomethyl (C))H]Y[AG]Q{I|L};[AG]{I|L}Q[C(Carbamidomethyl (C))H]YQ[AG]{I|L};[AG]{I|L}E{[ET]|[MV]}[DN]QQ{I|L};[AG]{I|L}E[DG]{[WT]|[RM]}QQ{I|L} 4.877;4.5578;4.1201;4.1201;4.055;3.9182;3.8045;3.8045;3.6457;3.6457 -;-;-;-;-;-;-;-;-;- 1717 1 1.45 84730.3 0.75 6417 4694 11095 HBL1_DMSO_200M_050219_2,11113 HBL1_DMSO_200M_050219_2,11113,KYPDYYQQI True True KYPDYYQQI 60.038641 609.298266589642 11766924.0 11095.0 nc|ENSG00000163939|Q86U86-7|PBRM1;;ENSG00000163939|ENST00000707071|PBRM1;;nc|ENSG00000163939|Q86U86-8|PBRM1;;nc|ENSG00000163939|Q86U86-4|PBRM1;;nc|ENSG00000163939|Q86U86-5|PBRM1;;nc|ENSG00000163939|Q86U86|PBRM1;;nc|ENSG00000163939|Q86U86-2|PBRM1;;nc|ENSG00000163939|Q86U86-3|PBRM1;;nc|ENSG00000163939|Q86U86-6|PBRM1;;nc|ENSG00000163939|Q86U86-9|PBRM1 6.768288453420003 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11115 60.043 25.0 2070200.0 25 0 355330.0 -1 0 77 346.70839167899976 691.4022304247995 2 346.7080261111259 MULTI CID FTMS 0 0 0 11114 1975768.125 0.3792156464389468 2 -0.175262451171875 1 4 [R{M(Oxidation (M))|F}]GVT{I|L} 6 -1 + 48.677 0.0 0.0 7.0404 7.0404 91.144 0.0 0.0 0.0 10.496812376923046 41.687522094009 10.496812376923046 10.929862658764264 0 0.9247425010840048 0.0 0.3807196863200844 0.6237125054200234 [R{M(Oxidation (M))|F}]GVT{I|L};[R{M(Oxidation (M))|F}]KE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[R{M(Oxidation (M))|F}]{I|L} 7.0404;5.4595;2.4228 -;-;- 119 1 1.45 43942.1 1.0 6418 4695 11114 HBL1_DMSO_200M_050219_2,11115 HBL1_DMSO_200M_050219_2,11115, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11116 60.044 46.0 799040.0 25 0 63230.0 + 43748 YEASYSEGPVV 11 68 600.7748072761125 1199.5350616190249 2 600.7754394412041 MULTI CID FTMS 0 0 0 11114 926658.75 0.4596013189017286 2 -0.175262451171875 2 Unmodified _YEASYSEGPVV_ REV__ENSG00000101365|ENST00000380843|IDH3B;REV__ENST00000492240.5_1_20:2640597-2640995:-|nuORF;REV__nc|ENSG00000101365|O43837-2|IDH3B;REV__nc|ENSG00000101365|O43837-3|IDH3B 8.745405648335112 0.8338865417133445 4 P{M(Oxidation (M))|F}PVV 5 -1 43.201 0.0 0.0 3.6015 0.0 0.0 642.2144642560562 0.0 642.2144642560562 0.0 36.2113751626007 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 P{M(Oxidation (M))|F}PVV 3.6015 - 98 1 1.45 31688.5 1.0 6419 4695 11114 HBL1_DMSO_200M_050219_2,11116 HBL1_DMSO_200M_050219_2,11116,YEASYSEGPVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11117 60.046 28.0 1810800.0 25 0 353790.0 + 33376 SGKSGVKG 8 79 360.20701350576365 718.3994740783273 2 360.2065612673759 MULTI CID FTMS 0 0 0 11114 1978726.375 0.540648953160662 -2 0.2033538818359375 3 Unmodified _SGKSGVKG_ REV__ENST00000561077.1_1_15:59397440-59406659:+|nuORF 0.6903765706972694 0.8201419426409876 4 V 1 -1 3.0989 0.0 0.0 0.43137 0.0 0.0 377.21452032031794 239.09255396060783 616.3070742809258 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.43137 + + 7 + 1 1.45 45919.4 1.0 6420 4695 11114 HBL1_DMSO_200M_050219_2,11117 HBL1_DMSO_200M_050219_2,11117,SGKSGVKG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11118 60.047 41.0 1391900.0 25 0 99839.0 + 29920 TPRVIIQTV 9 90 513.8188749077024 1025.6231968822046 2 513.8192626833916 MULTI CID FTMS 0 0 0 11114 1465865.625 0.8565106510158009 -1 0.1104278564453125 4 Unmodified _QSIIRPLTV_ ENST00000447863.5_1_7:86811523-86824453:+|nuORF;ENST00000425406.5_1_7:86817376-86824453:+|nuORF;ENST00000547146.6_1_7:86813892-86824453:+|nuORF;nc|ENSG00000135164|Q9Y222-5|DMTF1;ENSG00000135164|ENST00000331242|DMTF1 26.88365393820708 0.1891292719743517 4 {[TV]|[{I|L}S]}[RP]{I|L}{I|L}QTV 9 4 + 45.92 0.0 0.0 4.4773 4.4773 79.424 0.0 0.0 0.0 12.286881741466615 31.22704435687069 12.286881741466615 9.208187539523747 0 0.7429928190999391 1.154901959985743 0.3807196863200844 0.0 {[TV]|[{I|L}S]}[RP]{I|L}{I|L}QTV;{[TV]|[{I|L}S]}[RP]{I|L}{I|L}[AG]TV;[R{I|L}][PS]{I|L}{I|L}QTV;[R{I|L}][PS]{I|L}{I|L}[AG]TV;[NP]VKK{I|L}QTV;[NP]VKK{I|L}[AG]TV;[R{I|L}][R{I|L}]{I|L}Q{NN|[MP]|[D{I|L}]|[EV]} 4.4773;3.5794;2.9632;2.0654;1.7115;0.81366;0.18372 -;-;-;-;-;-;- 214 1 1.45 51453.1 1.0 6421 4695 11114 HBL1_DMSO_200M_050219_2,11118 HBL1_DMSO_200M_050219_2,11118,QSIIRPLTV False False TPRVIIQTV 60.046724 513.819262683392 27451602.0 11114.0 ENST00000447863.5_1_7:86811523-86824453:+|nuORF;;ENST00000425406.5_1_7:86817376-86824453:+|nuORF;;ENST00000547146.6_1_7:86813892-86824453:+|nuORF;;nc|ENSG00000135164|Q9Y222-5|DMTF1;;ENSG00000135164|ENST00000331242|DMTF1 5.780343214670817 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11119 60.048 37.0 1388900.0 25 0 115570.0 + 22121 LPPPVQTQI 9 93 496.7926827535134 991.5708125738269 2 496.7928649783134 MULTI CID FTMS 0 0 0 11114 1297375.0 0.3249421716268222 13 -1.2286529541015625 5 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 40.44857923139169 0.0729940656229577 4 [{I|L}P]PPVQ 6 3 32.396 0.0 0.0 3.2671 0.0 0.0 0.0 357.17597389051883 357.17597389051883 12.931825014007217 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [{I|L}P]PPVQ 3.2671 + + 414 1 1.45 45644.9 1.0 6422 4695 11114 HBL1_DMSO_200M_050219_2,11119 HBL1_DMSO_200M_050219_2,11119,LPPPVQTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11120 60.049 34.0 1940200.0 25 0 422550.0 + 16920 KIIYIVHDEV 10 87 410.2360332012356 1227.6862702039068 3 410.2359802126884 MULTI CID FTMS 0 0 0 11114 941807.75 0.8004085721539911 -1 0.1104278564453125 6 Unmodified _KIIYIVHDEV_ ENSG00000100567|ENST00000216455|PSMA3;nc|ENSG00000100567|P25788-2|PSMA3 22.774965066869 0.4569865297271528 4 [K{I|L}]{I|L}Y{I|L} 5 5 26.2 0.0 0.0 2.1341 0.0 0.0 0.0 594.2525293193943 594.2525293193943 13.012503455988686 0.0 0.0 0.0 0 0.5 0.7695510786217261 0.0 0.4811132596518673 + [K{I|L}]{I|L}Y{I|L} 2.1341 + + 287 1 1.45 59711.8 1.0 6423 4695 11114 HBL1_DMSO_200M_050219_2,11120 HBL1_DMSO_200M_050219_2,11120,KIIYIVHDEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11121 60.051 93.0 676760.0 25 0 145850.0 27782 PLPPPPPLA 9 64 449.7732923312103 897.5320317292206 2 449.7735168337822 MULTI CID FTMS 0 0 0 11114 538053.25 0.6441973203804219 -7 0.7355690002441406 7 Unmodified _PLPPPPPLA_ ENSG00000176182|ENST00000322217|MYPOP;REV__ENSG00000110721|ENST00000265689|CHKA;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__nc|ENSG00000110721|P35790-2|CHKA;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3 45.7499826716795 0.0496882803020414 4 [{I|L}P]PPPP 6 3 50.45 0.0 0.0 5.621 0.0 0.0 0.0 296.1621117499631 296.1621117499631 36.95554701812867 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + [{I|L}P]PPPP 5.621 + + 65 1 1.45 53712.4 1.0 6424 4695 11114 HBL1_DMSO_200M_050219_2,11121 HBL1_DMSO_200M_050219_2,11121,PLPPPPPLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11122 60.053 111.0 642800.0 25 0 39300.0 + 4587 DAYSKRFISV 10 95 593.3167377035044 1184.6189224738089 2 593.3173705935478 MULTI CID FTMS 0 0 0 11114 489536.65625 0.6076241579853461 1 -0.0802803039550781 8 Unmodified _DAYSKRFISV_ ENSG00000186635|ENST00000393609|ARAP1;ENST00000465814.5_1_11:72407932-72423670:-|nuORF;nc|ENSG00000186635|Q96P48-1|ARAP1;nc|ENSG00000186635|Q96P48-2|ARAP1;nc|ENSG00000186635|Q96P48-3|ARAP1;nc|ENSG00000186635|Q96P48-4|ARAP1;nc|ENSG00000186635|Q96P48-7|ARAP1 43.476825903602695 0.120852566744744 4 {[DA]|[EG]}YSR 5 5 44.864 0.0 0.0 3.7872 0.0 0.0 0.0 589.3461397760374 589.3461397760374 15.544452981871324 0.0 0.0 0.0 0 1.1307196863200843 1.5228787452803376 0.0 0.0 {[DA]|[EG]}YSR 3.7872 - 169 + 1 1.45 58654.5 1.0 6425 4695 11114 HBL1_DMSO_200M_050219_2,11122 HBL1_DMSO_200M_050219_2,11122,DAYSKRFISV True True DAYSKRFISV 60.053468 593.317370593548 16225173.25 11114.0 nc|ENSG00000186635|Q96P48-2|ARAP1;;ENSG00000186635|ENST00000393609|ARAP1;;nc|ENSG00000186635|Q96P48-7|ARAP1;;ENST00000465814.5_1_11:72407932-72423670:-|nuORF;;nc|ENSG00000186635|Q96P48-3|ARAP1;;nc|ENSG00000186635|Q96P48-1|ARAP1;;nc|ENSG00000186635|Q96P48-4|ARAP1 6.199338277180989 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11123 60.057 163.0 626600.0 25 0 113820.0 + 5084 DGYMPREL 8 105 490.7286463515514 979.4427397699028 2 490.7291137576103 MULTI CID FTMS 0 0 0 11114 441770.3125 1.0 0 0.0 9 Unmodified _DGYMPREL_ ENSG00000128607|ENST00000335420|KLHDC10;ENST00000495724.1_1_7:129756322-129757411:+|nuORF;nc|ENSG00000128607|Q6PID8-2|KLHDC10 22.736283301280096 0.5659792798204337 4 [DG]YM{I|L}[WP]V 8 4 + 40.693 0.0 0.0 4.1547 4.1547 67.797 0.0 0.0 0.0 21.2562484844592 2.65153777800478 2.65153777800478 1.7609125905568137 0 0.7742275032520141 0.958607314841775 0.0 0.0 [DG]YM{I|L}[WP]V;[DG]YMP[W{I|L}]V;[DG]YMP{[RE]|[WV]}{I|L};[DG]Y{I|L}M[WP]V;[DG]YMW[{I|L}P]V;[DG]YMW[VP]{I|L};[DG]YM{[DA]|[EG]}[{I|L}P]V;[DG]Y[YV][HQ]V;[DG]YM{[DA]|[EG]}[VP]{I|L};[DG]Y[YV][HN]{I|L} 4.1547;3.9749;3.8383;3.6676;3.4411;2.9925;2.4954;2.4532;2.0469;2.0047 -;-;+;-;-;-;-;-;-;- + 233 + 1 1.45 83549.5 1.0 6426 4695 11114 HBL1_DMSO_200M_050219_2,11123 HBL1_DMSO_200M_050219_2,11123,DGYMPREL False True DGYMPREL 60.056665 490.72911375761 4347199.5 11114.0 nc|ENSG00000128607|Q6PID8-2|KLHDC10;;ENST00000495724.1_1_7:129756322-129757411:+|nuORF;;ENSG00000128607|ENST00000335420|KLHDC10 3.3299480676651 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11124 60.058 58.0 692640.0 25 0 91917.0 + 4467 DAYALNHTL 9 80 509.2535253747258 1016.4924978162516 2 509.2530395388603 MULTI CID FTMS 0 0 0 11114 378123.3125 0.0012463690162549 24 -2.28042221069336 10 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 34.40172386719151 0.1061884637610825 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DA{I|L}N[HT]{I|L} 9 2 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D + + 33.074 19.666 5.6328 3.2537 3.2537 46.543 0.0 0.0 0.0 0.0 13.40807601740966 0.0 0.0 0 0.4247425010840047 0.0 1.1549471895720984 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DA{I|L}N[HT]{I|L} 3.2537 - 73 + 1 1.45 38314.4 1.0 6427 4695 11114 HBL1_DMSO_200M_050219_2,11124 HBL1_DMSO_200M_050219_2,11124,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11125 60.061 121.0 517280.0 25 0 58829.0 + 3597 DAAMKAMTI 9 101 476.2352813221335 950.4560097110668 2 476.2356140017509 MULTI CID FTMS 0 0 0 11114 357979.59375 0.2307269012609815 -2 0.2033538818359375 11 Unmodified _DAAMKAMTI_ ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR 51.41523569358685 0.0372669606867193 4 {[DA]|[EG]}AMKAMT{I|L} 9 0 + 62.092 0.0 0.0 6.5329 6.5329 84.209 0.0 0.0 0.0 11.044752778449514 26.68533158737037 11.044752778449514 6.262874945799766 0 2.1549471895720984 2.0 0.3252574989159953 0.0 + + {[DA]|[EG]}AMKAMT{I|L};{[DA]|[EG]}AMKVCT{I|L};{[DA]|[EG]}AR{[CA]|SS}MT{I|L};{[DA]|[EG]}A[YV]{[WN]|[YH]}{I|L};{[DS]|[MA]|[CV]|TT}KADAMT{I|L};{[DS]|[MA]|[CV]|TT}KAADMT{I|L};{[DS]|[MA]|[CV]|TT}KAMWT{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MKAMT{I|L};{[DA]|[EG]}A[YV][WQ]V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AADAMT{I|L} 6.5329;5.874;4.9138;4.3276;3.6407;3.6407;3.567;3.5377;3.2605;3.0357 +;-;-;-;-;-;-;-;-;- + 634 1 1.45 54964.2 1.0 6428 4695 11114 HBL1_DMSO_200M_050219_2,11125 HBL1_DMSO_200M_050219_2,11125,DAAMKAMTI True True DAAMKAMTI 60.060603 476.235614001751 22189306.0 11114.0 nc|ENSG00000160710|P55265-3|ADAR;;nc|ENSG00000160710|P55265-2|ADAR;;nc|ENSG00000160710|P55265-4|ADAR;;ENSG00000160710|ENST00000368474|ADAR;;nc|ENSG00000160710|P55265-5|ADAR 7.177292823791504 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11126 60.063 115.0 669980.0 25 0 50060.0 + 35392 STFGYVHGV 9 119 483.7364695284735 965.458386123747 2 483.7379333376884 MULTI CID FTMS 0 0 0 11114 310528.875 0.9251055379678338 -1 0.1104278564453125 12 Unmodified _STFGYVHGV_ ENSG00000114573|ENST00000273398|ATP6V1A;ENST00000462855.1_1_3:113497600-113497687:+|nuORF 34.18733598223924 0.1073653526364521 4 {[MG]|[TS]}{M(Oxidation (M))|F}GYV 6 3 21.432 0.0 0.0 2.2199 0.0 0.0 0.0 308.13681970767817 308.13681970767817 7.452359395051715 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {[MG]|[TS]}{M(Oxidation (M))|F}GYV 2.2199 + + 244 + 1 1.45 63520.6 1.0 6429 4695 11114 HBL1_DMSO_200M_050219_2,11126 HBL1_DMSO_200M_050219_2,11126,STFGYVHGV True True STFGYVHGV 60.063003 483.737933337688 2852912.0 11114.0 ENSG00000114573|ENST00000273398|ATP6V1A;;ENST00000462855.1_1_3:113497600-113497687:+|nuORF 6.451052029927571 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11127 60.075 666.0 418650.0 25 0 47582.0 + 37702 TLPERPLTEV 10 179 577.824564132405 1153.63457533161 2 577.8248168826103 MULTI CID FTMS 0 0 0 11114 307189.75 0.8686712943620023 1 -0.0802803039550781 13 Unmodified _TLPERPLTEV_ ENSG00000204569|ENST00000376511|PPP1R10 59.05245873256422 0.0390717477387156 4 [{I|L}T]PERP{I|L}TEV 10 0 + 56.301 0.0 0.0 4.8804 4.8804 67.319 0.0 0.0 0.0 14.547322101679974 4.072779458418708 4.072779458418708 0.0811170598155683 0 1.8424778212679485 2.0 1.1307196863200843 0.0 + + [{I|L}T]PERP{I|L}TEV;[{I|L}T]PERP{I|L}ETV;[EP]R[{I|L}P]TE{I|L}TV;[{I|L}T]V[WP]P{I|L}TEV;[{I|L}T]V[WP]P{I|L}ETV;[EP]R[{I|L}T]PE{I|L}TV;[EP]R[{I|L}P]TEVT{I|L};[{I|L}T]PERP{I|L}TD{I|L};[{I|L}T]PERP{I|L}ES{I|L};{[QN]|[E{I|L}]|[KN]}[RV]{I|L}CEPPV 4.8804;4.8733;4.3995;4.2943;4.2873;4.2077;3.71;3.5994;3.5924;3.5388 +;-;-;-;-;-;-;-;-;- + 1003 + 1 1.45 208148.9 1.0 6430 4695 11114 HBL1_DMSO_200M_050219_2,11127 HBL1_DMSO_200M_050219_2,11127,TLPERPLTEV True True TLPERPLTEV 60.074605 577.82481688261 10411290.0 11114.0 ENSG00000204569|ENST00000376511|PPP1R10 4.794809500376384 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11128 60.077 121.0 561030.0 25 0 36994.0 + 15513 IPVEFQKTV 9 113 530.8060588002231 1059.5975646672462 2 530.8057128787041 MULTI CID FTMS 0 0 0 11114 292778.90625 0.3525839806895783 -2 0.2033538818359375 14 Unmodified _IPVEFQKTV_ ENSG00000085365|ENST00000621999|SCAMP1;nc|ENSG00000085365|O15126-2|SCAMP1 55.50274090549119 0.0285720310785888 4 {I|L}PVE{M(Oxidation (M))|F}QKTV 9 0 + 75.416 0.0 0.0 7.1174 7.1174 79.726 0.0 0.0 0.0 24.11371613730025 1.906814518019388 1.906814518019388 1.906814518019388 0 1.079689690656103 1.3010299956639813 1.079689690656103 0.0 + + {I|L}PVE{M(Oxidation (M))|F}QKTV;{I|L}PVE{M(Oxidation (M))|F}QKS{I|L};[{I|L}P]D{M(Oxidation (M))|F}QK{I|L}S{I|L};[VP]E{M(Oxidation (M))|F}QK{I|L}S{I|L};[{I|L}P]D{M(Oxidation (M))|F}QKTV{I|L};[VP]E{M(Oxidation (M))|F}QKTV{I|L};[{I|L}P]D{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}PV{I|L};[VP]E{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}PV{I|L};[{I|L}P]D{M(Oxidation (M))|F}[AG]K{I|L}S{I|L};[VP]E{M(Oxidation (M))|F}[AG]K{I|L}S{I|L} 7.1174;6.9375;6.2548;6.2332;5.9491;5.9275;5.4988;5.4772;5.3858;5.3642 +;-;-;-;-;-;-;-;-;- + 1068 + 1 1.45 62599.5 1.0 6431 4695 11114 HBL1_DMSO_200M_050219_2,11128 HBL1_DMSO_200M_050219_2,11128,IPVEFQKTV True True IPVEFQKTV 60.077117 530.805712878704 7314960.0 11114.0 ENSG00000085365|ENST00000621999|SCAMP1;;nc|ENSG00000085365|O15126-2|SCAMP1 6.049135684967041 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11129 60.08 130.0 525240.0 25 0 28998.0 + 17228 KLLGSMEQV 9 101 502.7750790746041 1003.5356052160082 2 502.7749206423759 MULTI CID FTMS 0 0 0 11114 249494.421875 0.3758205606874808 -2 0.2033538818359375 15 Unmodified _KLLGSMEQV_ ENSG00000149262|ENST00000534064|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;ENST00000587624.5_1_7:64601607-64646883:+|nuORF;nc|ENSG00000149262|Q96HW7-2|INTS4;nc|ENSG00000149262|Q96HW7-3|INTS4 36.506200033944 0.094635877243972 4 G{I|L}{I|L}GSMEQV 9 1 51.641 0.0 0.0 5.1459 0.0 0.0 71.07433516670078 0.0 71.07433516670078 0.0 28.441256818767823 0.0 0.0 0 0.3807196863200844 0.0 0.7302046884880937 0.0 G{I|L}{I|L}GSMEQV 5.1459 - 488 1 1.45 59550.6 1.0 6432 4695 11114 HBL1_DMSO_200M_050219_2,11129 HBL1_DMSO_200M_050219_2,11129,KLLGSMEQV True True KLLGSMEQV 60.079772 502.774920642376 4753574.0 11114.0 nc|ENSG00000149262|Q96HW7-2|INTS4;;ENSG00000149262|ENST00000534064|INTS4;;nc|ENSG00000149262|Q96HW7-3|INTS4;;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;;ENST00000587624.5_1_7:64601607-64646883:+|nuORF 6.2106374104817705 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11130 60.083 160.0 396810.0 25 0 24193.0 + 2394 AQPEMFDKV 9 98 532.7578067739507 1063.5010606147014 2 532.7571288943291 MULTI CID FTMS 0 0 0 11114 226292.578125 0.5189670042088619 -2 0.2033538818359375 16 Unmodified _AQPEMFDKV_ ENSG00000178694|ENST00000314622|NSUN3 43.77239144664712 0.0547478964384323 4 [QA]PEM{M(Oxidation (M))|F}DKV 9 0 + 45.685 0.0 0.0 4.2957 4.2957 81.333 0.0 0.0 0.0 11.13701850861451 9.87765543582988 9.87765543582988 13.869446243705742 0 0.5 0.958607314841775 0.6307196863200843 0.0 + + [QA]PEM{M(Oxidation (M))|F}DKV;[QA]PEM{M(Oxidation (M))|F}[QT]{I|L};[QA]PEM{M(Oxidation (M))|F}AATV;[QA]PEM{M(Oxidation (M))|F}AAS{I|L};[QA]PE[HT][WP]V;[QA]P{M(Oxidation (M))|F}{[ET]|[MV]}{M(Oxidation (M))|F}[QP];[QA]P{M(Oxidation (M))|F}{[ET]|[MV]}[KP]{M(Oxidation (M))|F};[QA]P{M(Oxidation (M))|F}{[ET]|[MV]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;[QA]P{M(Oxidation (M))|F}{[ET]|[MV]}AAMV;[QA]QQ{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}[QP] 4.2957;2.9916;2.7156;2.3254;1.9017;1.7253;1.3674;1.2217;0.75822;0.44973 +;-;-;-;-;-;-;-;-;- + 355 + 1 1.45 58949.0 1.0 6433 4695 11114 HBL1_DMSO_200M_050219_2,11130 HBL1_DMSO_200M_050219_2,11130,AQPEMFDKV True True AQPEMFDKV 60.082938 532.757128894329 4324284.0 11114.0 ENSG00000178694|ENST00000314622|NSUN3 7.703056971232097 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11131 60.086 140.0 454840.0 25 0 47165.0 39893 VFMPRPQAV 9 100 522.7873504207547 0 522.7872192263603 PEAK CID FTMS 0 0 0 11114 222318.890625 0.2321637054951315 3 -0.2710685729980469 17 Unmodified _VFMPRPQAV_ ENSG00000165660|ENST00000298492|ABRAXAS2 16.942295170755138 0.2326366549411506 4 D{I|L} 2 9 9.6927 0.0 0.0 0.92881 0.0 0.0 232.1373616645082 580.2849428405752 812.4223045050835 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 D{I|L} 0.92881 - 61 + 1 1.45 56458.7 1.0 6434 4695 11114 HBL1_DMSO_200M_050219_2,11131 HBL1_DMSO_200M_050219_2,11131,VFMPRPQAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11132 60.1 800.0 357230.0 25 0 33603.0 + 25028 MPRLIAKV 8 222 464.2941654190246 926.5737779048492 2 464.2955200076103 MULTI CID FTMS 0 0 0 11114 201762.21875 0.4550605896638852 -3 0.337371826171875 18 Unmodified _MPRLIAKV_ ENSG00000100664|ENST00000216554|EIF5;ENST00000559249.5_1_14:103802197-103802459:+|nuORF 39.957323273325 0.2350051964751539 4 {[QV]|[N{I|L}]|[RA]|[KV]}[RN]{I|L}AKV 8 3 + 46.711 0.0 0.0 5.0413 5.0413 83.635 0.0 0.0 0.0 10.406075122407684 31.139414033108665 10.406075122407684 12.123339658940012 0 1.0387254899964358 1.6989700043360187 0.0 0.1989700043360188 {[QV]|[N{I|L}]|[RA]|[KV]}[RN]{I|L}AKV;[{I|L}P]{[WT]|[RM]}{I|L}AKV;[{I|L}A]P[R{I|L}]MKV;[{I|L}P]A[R{I|L}]MKV;[{I|L}A]P[R{I|L}]KMV;AARR[VG]AKV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KARV;[{I|L}P]A[R{I|L}]KMV;[PA]{I|L}[R{I|L}]MKV;{[QN]|[E{I|L}]|[KN]}AA{I|L}RRV 5.0413;3.7328;3.0787;2.6768;2.1054;1.9933;1.7354;1.7035;1.2874;0.61955 -;-;-;-;-;-;-;-;-;- 1335 1 1.45 216068.2 0.8399999737739563 6435 4695 11114 HBL1_DMSO_200M_050219_2,11132 HBL1_DMSO_200M_050219_2,11132,MPRLIAKV False True MPRLIAKV 60.09958 462.2819 5026093.5 11114.0 ENST00000559249.5_1_14:103802197-103802459:+|nuORF;;ENSG00000100664|ENST00000216554|EIF5 4.052452087402344 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11133 60.115 800.0 223980.0 25 0 40902.0 -1 0 80 1082.0939501965336 3243.2600211898007 3 1082.762866199017 MULTI CID FTMS 0 0 0 11114 190668.921875 0.2961947691237305 -3 0.337371826171875 19 4 YY[YE]NRQR 8 -1 23.977 0.0 0.0 0.7393 0.0 0.0 1618.586023242338 449.1679171197876 2067.753940362126 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 YY[YE]NRQR 0.7393 - 1353 + 1 1.45 150160.9 0.7400000095367432 6436 4695 11114 HBL1_DMSO_200M_050219_2,11133 HBL1_DMSO_200M_050219_2,11133, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11134 60.119 229.0 333990.0 25 0 34243.0 30892 RIPLAKMV 8 90 309.8656378102371 926.5750840309112 3 309.8649474978447 MULTI CID FTMS 0 0 0 11114 172451.1875 0.4658311129044307 -3 0.337371826171875 20 Unmodified _RIPLAKMV_ ENST00000355072.9_1_4:3244305-3244500:+|nuORF 8.593279151180031 0.7721714526254883 4 MV 2 6 20.969 0.0 0.0 2.2631 0.0 0.0 0.0 693.4419759038502 693.4419759038502 6.276362525516532 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + MV 2.2631 + + 32 + 1 1.45 72699.3 1.0 6437 4695 11114 HBL1_DMSO_200M_050219_2,11134 HBL1_DMSO_200M_050219_2,11134,RIPLAKMV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11136 60.13 448.0 310200.0 25 0 87061.0 -1 0 48 1190.498859024644 3568.474747674132 3 1191.168261706829 MULTI CID FTMS 0 0 0 11135 628847.125 0.7391289527925283 1 -0.0949821472167968 1 4 C(Carbamidomethyl (C))Y{M(Oxidation (M))|F} 3 -1 10.177 0.0 0.0 0.2852 0.0 0.0 1312.4646727557265 1782.839295285043 3095.303968040769 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))Y{M(Oxidation (M))|F} 0.2852 - 27 + 1 1.452 120647.5 1.0 6438 4696 11135 HBL1_DMSO_200M_050219_2,11136 HBL1_DMSO_200M_050219_2,11136, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11137 60.132 66.0 984150.0 25 0 143810.0 + 27239 PGPPGKLA 8 96 368.7204386744437 735.4263244156874 2 368.7198669314384 MULTI CID FTMS 0 0 0 11135 1034027.375 0.8819977530550572 -1 0.0802803039550781 2 Unmodified _PGPPGKLA_ REV__ENSG00000050767|ENST00000390654|COL23A1 0.7936320650641473 0.8195151834710337 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.452 57497.7 1.0 6439 4696 11135 HBL1_DMSO_200M_050219_2,11137 HBL1_DMSO_200M_050219_2,11137,PGPPGKLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11138 60.134 78.0 862170.0 25 0 146860.0 + 33626 SIREYITKL 9 90 374.8891728804976 1121.6456892416927 3 374.8885070681572 MULTI CID FTMS 0 0 0 11135 593467.6875 1.0 0 0.0 3 Unmodified _SIREYITKL_ REV__ENSG00000134313|ENST00000256707|KIDINS220;REV__ENST00000488729.5_1_2:8870852-8965899:-|nuORF;REV__nc|ENSG00000134313|Q9ULH0-2|KIDINS220;REV__nc|ENSG00000134313|Q9ULH0-4|KIDINS220 12.240655878213236 0.5053430591993562 4 {I|L}K{[DS]|[MA]|[CV]|TT}YPK{I|L} 8 -1 29.346 0.0 0.0 2.6164 0.0 0.0 159.08915165925936 0.0 159.08915165925936 0.0 8.455612550363796 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.4247425010840047 {I|L}K{[DS]|[MA]|[CV]|TT}YPK{I|L} 2.6164 - 326 + 1 1.452 60346.9 1.0 6440 4696 11135 HBL1_DMSO_200M_050219_2,11138 HBL1_DMSO_200M_050219_2,11138,SIREYITKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11139 60.14 332.0 636950.0 25 0 67402.0 + 16064 ITMYFEESA 9 158 545.7401680559178 1089.4657831786355 2 545.7406494021416 MULTI CID FTMS 0 0 0 11135 271325.6875 1.0 0 0.0 4 Unmodified _ITMYFEESA_ REV__ENSG00000102780|ENST00000337343|DGKH;REV__ENST00000498255.6_1_13:42728006-42769963:+|nuORF;REV__nc|ENSG00000102780|Q86XP1-2|DGKH;REV__nc|ENSG00000102780|Q86XP1-3|DGKH;REV__nc|ENSG00000102780|Q86XP1-5|DGKH 20.453626601364224 0.2830276176381075 4 {I|L}T{[QC]|[C(Carbamidomethyl (C))A]}[HD]TC(Carbamidomethyl (C)){I|L} 9 -1 + 34.051 0.0 0.0 3.1255 3.1255 77.357 0.0 0.0 0.0 17.592503013052937 6.972893776096221 6.972893776096221 12.570071809000613 0 0.9163865622122672 0.0 0.805462187404089 0.0 {I|L}T{[QC]|[C(Carbamidomethyl (C))A]}[HD]TC(Carbamidomethyl (C)){I|L};{I|L}{M(Oxidation (M))|F}{[QG]|[NA]}[HD]TC(Carbamidomethyl (C)){I|L};{[QN]|[E{I|L}]|[KN]}YYWCT{I|L};[YQ]T[WR]{[YC]|[HE]}A;[YQ]T[HD]{[QG]|[NA]}E{I|L};{[QN]|[E{I|L}]|[KN]}YYMVC(Carbamidomethyl (C)){I|L};{[QN]|[E{I|L}]|[KN]}YYEGCT{I|L};[QT][WR]Y{[YC]|[HE]}A;[YQ]T[WK]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QN]|[E{I|L}]|[KN]}YY[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]PV 3.1255;1.9717;1.2703;1.0832;1.0274;0.86462;0.55186;0.55154;0.52648;0.47429 -;-;-;-;-;-;-;-;-;- 718 + 1 1.452 161444.8 1.0 6441 4696 11135 HBL1_DMSO_200M_050219_2,11139 HBL1_DMSO_200M_050219_2,11139,ITMYFEESA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11140 60.154 800.0 321950.0 25 0 30014.0 + 22061 LPPPPPPQL 9 211 478.2842596244195 954.5539663156392 2 478.2834655642509 MULTI CID FTMS 0 0 0 11135 234741.59375 0.8443281640734942 -1 0.0802803039550781 5 Unmodified _LPPPPPPQL_ ENSG00000184083|ENST00000375180|FAM120C;nc|ENSG00000184083|Q9NX05-2|FAM120C 97.07464715276576 0.0121042244793311 4 [{I|L}P]PPPPPQ{I|L} 9 0 + 75.13 0.0 0.0 7.8707 7.8707 95.645 0.0 0.0 0.0 21.48244219558069 47.68237211568909 21.48244219558069 23.49993446776488 0 2.528659694992122 2.0 0.0 0.0 + + [{I|L}P]PPPPPQ{I|L};[{I|L}P][YK]PPQ{I|L};{[HG]|PP}{I|L}PPPPQ{I|L};[{I|L}P]P[YK]PQ{I|L};[YK]{I|L}PPPQ{I|L};{[HG]|PP}P{I|L}PPPQ{I|L};[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}PQ{I|L};[Q{I|L}]{M(Oxidation (M))|F}{I|L}PPQ{I|L};[YK]P{I|L}PPQ{I|L};{[HG]|PP}PP{I|L}PPQ{I|L} 7.8707;5.4088;4.8347;4.7781;4.3377;4.2841;3.9517;3.3663;3.3082;3.2546 +;-;-;-;-;-;-;-;-;- + 767 1 1.452 196770.2 0.9200000166893004 6442 4696 11135 HBL1_DMSO_200M_050219_2,11140 HBL1_DMSO_200M_050219_2,11140,LPPPPPPQL False False LPPPPPPQL 60.153675 478.283465564251 5555336.5 11135.0 ENSG00000184083|ENST00000375180|FAM120C;;nc|ENSG00000184083|Q9NX05-2|FAM120C 5.670270760854085 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11141 60.16 320.0 523080.0 25 0 77084.0 + 32067 RVLGENAIAV 10 134 521.3056930802471 1040.5968332272942 2 521.3069335818291 MULTI CID FTMS 0 0 0 11135 214798.34375 0.6481800584456666 -1 0.0802803039550781 6 Unmodified _RVLGENAIAV_ ENSG00000164190|ENST00000282516|NIPBL;nc|ENSG00000164190|Q6KC79-2|NIPBL 21.59015148037692 0.4836074274810599 4 ENA{I|L}AV 6 4 43.053 0.0 0.0 4.1373 0.0 0.0 425.2771168439469 0.0 425.2771168439469 0.0 29.636153375280188 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + ENA{I|L}AV 4.1373 + + 215 1 1.452 135753.3 1.0 6443 4696 11135 HBL1_DMSO_200M_050219_2,11141 HBL1_DMSO_200M_050219_2,11141,RVLGENAIAV False True RVLGENAIAV 60.159511 521.306933581829 2640486.75 11135.0 nc|ENSG00000164190|Q6KC79-2|NIPBL;;ENSG00000164190|ENST00000282516|NIPBL 4.694688161214192 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11142 60.165 277.0 262660.0 25 0 55015.0 + 27162 PFSSPWTCYL 10 115 400.85246814256953 1199.5355750279086 3 400.8523132205009 MULTI CID FTMS 0 0 0 11135 215010.03125 0.3689500247260057 2 -0.1907882690429687 7 Unmodified _PFSSPWTCYL_ nc|nan|F2Z3F1|C5orf67 11.640296217721598 0.652229146672156 4 SPVV 4 8 17.619 0.0 0.0 1.4689 0.0 0.0 799.2983875959 0.0 799.2983875959 0.0 -2.6760624017703094 -2.6760624017703094 0.0 0 0.3807196863200844 0.0 0.0 0.0 SPVV 1.4689 - 171 1 1.452 57613.2 1.0 6444 4696 11135 HBL1_DMSO_200M_050219_2,11142 HBL1_DMSO_200M_050219_2,11142,PFSSPWTCYL False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11143 60.168 195.0 338560.0 25 0 50240.0 193 AAPICRKP 8 70 428.24815837719166 854.4817638211833 2 428.2441894412041 MULTI CID FTMS 0 0 0 11135 224251.53125 0.3885337520690797 5 -0.4595222473144531 8 Unmodified _AAPICRKP_ ENST00000291416.9_1_1:33611549-33612008:-|nuORF 2.889219685676258 0.8067950007271085 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.452 57376.1 1.0 6445 4696 11135 HBL1_DMSO_200M_050219_2,11143 HBL1_DMSO_200M_050219_2,11143,AAPICRKP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11144 60.171 140.0 439010.0 25 0 65474.0 -1 YQGPVHCIT 9 109 537.7561324609521 1073.4977119887042 2 537.7563964724541 MULTI CID FTMS 0 0 0 11135 161092.78125 0.8386831635254092 -1 0.0802803039550781 9 Carbamidomethyl (C) _YQGPVHC(Carbamidomethyl (C))IT_ ENSG00000145832|ENST00000681962|SLC25A48;nc|ENSG00000145832|Q6ZT89-2|SLC25A48 19.256988751693697 0.3154191944385105 4 YQTE{I|L}NE 7 -1 44.161 0.0 0.0 4.1138 0.0 0.0 0.0 193.0987337701781 193.0987337701781 23.219194935898884 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 YQTE{I|L}NE 4.1138 - 908 + 1 1.452 53641.2 1.0 6446 4696 11135 HBL1_DMSO_200M_050219_2,11144 HBL1_DMSO_200M_050219_2,11144,YQGPVHCIT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11145 60.186 800.0 240050.0 25 0 24382.0 + 45043 YPYEHSYGL 9 171 564.7534964596243 1127.4924399860486 2 564.7532226443291 MULTI CID FTMS 0 0 0 11135 136218.40625 0.2478422770752877 -4 0.4176521301269531 10 Unmodified _YPYEHSYGL_ ENSG00000119787|ENST00000378954|ATL2;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2 89.42679046578446 0.015225546354407 4 YPYE[HS]YG{I|L} 9 0 + 66.88 0.0 0.0 5.9317 5.9317 86.288 0.0 0.0 0.0 12.53666190510566 9.509211128768811 9.509211128768811 9.291746928241132 0 1.035666875892183 1.6989700043360187 0.8263487002666079 0.0 + + YPYE[HS]YG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EHSYG{I|L}Y;YPYE[HS]YAV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EHSYGY{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}HSYG{I|L}Y;YPYE[HS]G{I|L}Y;YPY{M(Oxidation (M))|F}K[{M(Oxidation (M))|F}T]Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}HSYGY{I|L};YPYE[VS]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H;YPYE[HS][VS]{M(Oxidation (M))|F} 5.9317;5.1076;5.0883;4.8198;4.0135;3.9836;3.8059;3.7257;3.6284;3.4055 +;-;-;-;-;-;-;-;-;- + 2007 + 1 1.452 146001.0 0.8100000023841858 6447 4696 11135 HBL1_DMSO_200M_050219_2,11145 HBL1_DMSO_200M_050219_2,11145,YPYEHSYGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11146 60.2 800.0 86847.0 25 0 12634.0 -1 0 57 1092.1091814492668 3273.3057149480005 3 1092.776171863079 MULTI CID FTMS 0 0 0 11135 104406.4921875 1.0 0 0.0 11 4 E 1 -1 5.4846 0.0 0.0 0.16755 0.0 0.0 2617.077831612504 524.1630953424436 3141.240926954948 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16755 - 19 + 1 1.452 57882.9 0.5199999809265137 6448 4696 11135 HBL1_DMSO_200M_050219_2,11146 HBL1_DMSO_200M_050219_2,11146, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11147 60.214 800.0 161770.0 25 0 11647.0 + 42046 VQVASTLSV 9 188 452.2615528801061 902.5085528270124 2 452.2626220583916 MULTI CID FTMS 0 0 0 11135 105959.8828125 1.0 0 0.0 12 Unmodified _VQVASTLSV_ ENSG00000225697|ENST00000395550|SLC26A6;ENST00000489483.5_1_3:48669605-48669995:-|nuORF;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-5|SLC26A6;nc|ENSG00000225697|Q9BXS9-6|SLC26A6 23.1484247019978 0.2366544122328345 4 [VS]A[RV]S{[RE]|[WV]} 8 6 + 22.201 0.0 0.0 2.4599 2.4599 67.593 0.0 0.0 0.0 3.939640830199732 4.36547381627074 3.939640830199732 3.939640830199732 0 0.0 1.2218487496163564 0.3539171939081173 0.0 [VS]A[RV]S{[RE]|[WV]};{[QV]|[N{I|L}]|[RA]|[KV]}V[VS]S{[RE]|[WV]};{[TV]|[{I|L}S]}G[RV]S{[RE]|[WV]};{[SA]|[TG]}V[RV]S{[RE]|[WV]};{[QV]|[N{I|L}]|[RA]|[KV]}V[HK][RH];{[VA]|[{I|L}G]}S[RV]S{[RE]|[WV]};{[TV]|[{I|L}S]}RRS{[RE]|[WV]};{NN|[MP]|[D{I|L}]|[EV]}[RK]S{[RE]|[WV]};[RH]P[RV]A[PA];[RH]P[KT]P[PA] 2.4599;2.0234;1.8869;1.5719;1.3132;1.2493;0.92156;0.79818;0.38041;0.13516 -;-;-;-;-;-;-;-;-;- 361 1 1.452 104677.2 0.5699999928474426 6449 4696 11135 HBL1_DMSO_200M_050219_2,11147 HBL1_DMSO_200M_050219_2,11147,VQVASTLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11149 60.218 10.0 4554600.0 25 0 761250.0 + 16918 KIIYIVHDEV 10 72 614.8506282240672 1227.6867035149344 2 614.8508788943291 MULTI CID FTMS 0 0 0 11148 4817372.5 0.7341499796474676 1 -0.0958061218261718 1 Unmodified _KIIYIVHDEV_ ENSG00000100567|ENST00000216455|PSMA3;nc|ENSG00000100567|P25788-2|PSMA3 59.05245873256422 0.0390717477387156 4 K{I|L}{I|L}Y{I|L}V 6 4 70.407 0.0 0.0 5.7349 0.0 0.0 0.0 495.1853764812572 495.1853764812572 47.71121912732279 0.0 0.0 0.0 0 1.9674165578762488 0.958607314841775 0.0 0.0 + K{I|L}{I|L}Y{I|L}V 5.7349 + + 309 + 1 1.452 42495.5 1.0 6450 4697 11148 HBL1_DMSO_200M_050219_2,11149 HBL1_DMSO_200M_050219_2,11149,KIIYIVHDEV True True KIIYIVHDEV 60.218354 614.850878894329 157175075.0 11148.0 ENSG00000100567|ENST00000216455|PSMA3;;nc|ENSG00000100567|P25788-2|PSMA3 4.29107944170634 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11150 60.22 8.2 4949900.0 25 0 406820.0 + 45197 YQTEIGQTL 9 70 526.7663031035079 1051.5180532738157 2 526.7667724490166 MULTI CID FTMS 0 0 0 11148 6781131.0 1.0 0 0.0 2 Unmodified _YQTEIGQTL_ ENSG00000160752|ENST00000368356|FDPS;ENST00000453932.1_1_7:76099481-76100288:-|nuORF;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS 43.85829265575387 0.0542763391141878 4 {I|L}EC(Carbamidomethyl (C))T{I|L} 5 6 39.641 0.0 0.0 3.7699 0.0 0.0 417.2237550333844 0.0 417.2237550333844 0.0 14.772437815030628 0.0 0.0 0 0.0 0.0 1.548455006504028 0.0 {I|L}EC(Carbamidomethyl (C))T{I|L} 3.7699 - 286 + 1 1.452 38254.7 1.0 6451 4697 11148 HBL1_DMSO_200M_050219_2,11150 HBL1_DMSO_200M_050219_2,11150,YQTEIGQTL True True YQTEIGQTL 60.219531 526.766772449017 161344236.0 11148.0 ENST00000453932.1_1_7:76099481-76100288:-|nuORF;;ENSG00000160752|ENST00000368356|FDPS;;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;;nc|ENSG00000160752|P14324-2|FDPS 7.13572359085083 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11151 60.221 14.0 2903200.0 25 0 701960.0 19343 LENLGQTIV 9 73 493.7794559043902 985.5443588755804 2 493.7797729372978 MULTI CID FTMS 0 0 0 11148 3781621.5 0.9608132769635364 -1 0.0949821472167968 3 Unmodified _LENLGQTIV_ ENSG00000177119|ENST00000320560|ANO6;nc|ENSG00000177119|Q4KMQ2-2|ANO6;nc|ENSG00000177119|Q4KMQ2-3|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6 32.30548876998284 0.1201446275138228 4 TQ{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V 6 7 34.927 0.0 0.0 3.5439 0.0 0.0 248.1751864095325 0.0 248.1751864095325 0.0 27.936909460092 0.0 0.0 0 0.3494850021680094 0.0 0.6989700043360187 0.3807196863200844 TQ{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V 3.5439 - 176 + 1 1.452 33737.1 1.0 6452 4697 11148 HBL1_DMSO_200M_050219_2,11151 HBL1_DMSO_200M_050219_2,11151,LENLGQTIV True False QPISTQTLV 60.22071 493.779772937298 32707022.0 11148.0 ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4 1.436004638671875 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11152 60.222 42.0 1543700.0 25 0 308770.0 + 22154 LPPSALQSV 9 85 456.26346091798274 910.5123689027656 2 456.2636901736259 MULTI CID FTMS 0 0 0 11148 1220835.5 0.8678646435681792 -4 0.3786163330078125 4 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 46.020951573049366 0.0490941689151868 4 [{I|L}P]{[SA]|[TG]}P{I|L}QSV 9 2 + 39.332 0.0 0.0 4.3197 4.3197 71.49 0.0 0.0 0.0 3.290587192642249 8.072420927871995 3.290587192642249 3.290587192642249 0 1.0172203223519531 1.5228787452803376 0.3807196863200844 0.0 [{I|L}P]{[SA]|[TG]}P{I|L}QSV;{[HG]|PP}SA{I|L}{I|L}QSV;[{I|L}P]{[SA]|[TG]}PQ{I|L}SV;[{I|L}P]{[SA]|[TG]}P{I|L}[AG]SV;{[HG]|PP}SA{I|L}Q{I|L}SV;{[HG]|PP}SA{I|L}{I|L}[AG]SV;[{I|L}P]{[SA]|[TG]}P[AG]{I|L}SV;[{I|L}P]{[SA]|[TG]}QP{I|L}SV;[AG]{I|L}VP{I|L}QDV;{[HG]|PP}SA{I|L}[AG]{I|L}SV 4.3197;3.9583;3.4119;3.3084;3.0505;2.947;2.4005;2.1391;2.0923;2.0391 -;-;-;-;-;-;-;-;-;- 280 1 1.452 55048.4 1.0 6453 4697 11148 HBL1_DMSO_200M_050219_2,11152 HBL1_DMSO_200M_050219_2,11152,LPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11153 60.223 62.0 961070.0 25 0 98947.0 + 18119 KTLERSYLL 9 85 561.8294084966179 1121.6442640600358 2 561.8298217654228 MULTI CID FTMS 0 0 0 11148 708361.3125 0.9307253195354922 1 -0.0958061218261718 5 Unmodified _KTLERSYLL_ ENSG00000167325|ENST00000300738|RRM1 23.78978130925829 0.2284941198415988 4 KT{I|L}E 4 5 37.537 0.0 0.0 3.3466 0.0 0.0 0.0 647.3515108697874 647.3515108697874 13.55600539572859 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.6747425010840047 0.0 + KT{I|L}E 3.3466 + + 82 + 1 1.452 49283.0 1.0 6454 4697 11148 HBL1_DMSO_200M_050219_2,11153 HBL1_DMSO_200M_050219_2,11153,KTLERSYLL False True KTLERSYLL 60.223427 561.829821765423 7181589.0 11148.0 ENSG00000167325|ENST00000300738|RRM1 5.78696330388387 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11154 60.225 63.0 786700.0 25 0 74164.0 + 41503 VPMTPLRTV 9 76 507.2946614967139 0 507.2947875857353 PEAK CID FTMS 0 0 0 11148 650860.0 0.1015647535381902 4 -0.3645401000976562 6 Unmodified _VPMTPLRTV_ ENSG00000107949|ENST00000278100|BCCIP 17.04857598603903 0.2314175144224729 4 PMTP 4 5 30.037 0.0 0.0 2.9664 0.0 0.0 99.06825965930793 484.2893160455688 583.3575757048767 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 + PMTP 2.9664 + + 39 + 1 1.452 46181.1 1.0 6455 4697 11148 HBL1_DMSO_200M_050219_2,11154 HBL1_DMSO_200M_050219_2,11154,VPMTPLRTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11155 60.227 69.0 1028700.0 25 0 193830.0 + 1594 ALLHAMTI 8 98 435.25113249996593 868.4877120667319 2 435.2516967654228 MULTI CID FTMS 0 0 0 11148 490637.21875 0.7882395083917805 -10 1.0289268493652344 7 Unmodified _ALLHAMTI_ REV__ENSG00000171262|ENST00000397609|FAM98B;REV__nc|ENSG00000171262|Q52LJ0-1|FAM98B 5.760428011301431 0.7893668129297577 4 NTQ[{I|L}T] 5 -1 19.309 0.0 0.0 2.2233 0.0 0.0 293.17418105293126 0.0 293.17418105293126 0.0 1.4522326604526723 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 NTQ[{I|L}T] 2.2233 - 216 1 1.452 62927.1 1.0 6456 4697 11148 HBL1_DMSO_200M_050219_2,11155 HBL1_DMSO_200M_050219_2,11155,ALLHAMTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11156 60.229 138.0 544080.0 25 0 66855.0 + 10550 FVEPSRQFV 9 77 554.7932220554766 1107.571891177753 2 554.7932617068291 MULTI CID FTMS 0 0 0 11148 433996.84375 0.6443081125327932 1 -0.0958061218261718 8 Unmodified _FVEPSRQFV_ ENSG00000132432|ENST00000352861|SEC61G;ENST00000460484.5_1_7:54823470-54826890:-|nuORF 38.17557092003332 0.0854718145212029 4 PE{NN|[MP]|[D{I|L}]|[EV]} 4 7 29.693 0.0 0.0 2.6809 0.0 0.0 635.3370228498062 0.0 635.3370228498062 0.0 17.91000098699497 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 PE{NN|[MP]|[D{I|L}]|[EV]} 2.6809 - 44 1 1.452 63781.9 1.0 6457 4697 11148 HBL1_DMSO_200M_050219_2,11156 HBL1_DMSO_200M_050219_2,11156,FVEPSRQFV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11157 60.234 232.0 691190.0 25 0 49004.0 + 21122 LPAPIEKTI 9 148 491.3025759089447 980.5905988846894 2 491.3029968142509 MULTI CID FTMS 0 0 0 11148 389639.1875 0.1406106665343461 -4 0.3786163330078125 9 Unmodified _LPAPIEKTI_ nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 67.83816525789305 0.0219346420158844 4 {I|L}PAP{I|L}EKT{I|L} 9 0 + 79.534 0.0 0.0 8.1109 8.1109 96.831 0.0 0.0 0.0 55.15614007759211 12.179702320710804 12.179702320710804 35.87192813110377 0 1.863364334130467 1.3979400086720375 0.6109243748081782 0.0 + + {I|L}PAP{I|L}EKT{I|L};[{I|L}P]ASVTVV[VP];[{I|L}P]EKTVV[VP];[PA]{I|L}SVTVV[VP];{I|L}VS{I|L}TV[PG]PV;{I|L}TVVTV[PG]PV;{I|L}VS{I|L}TV[PG]VP;{I|L}VS{I|L}T[{I|L}P]AAP;{I|L}TVVT[{I|L}P]AAP;[{I|L}P]AS[TA]{I|L}{I|L}[VP] 8.1109;4.4527;3.9428;3.4562;2.8055;2.3236;2.1676;2.0155;1.8652;1.781 +;-;-;-;-;-;-;-;-;- + 1639 + 1 1.452 123056.2 1.0 6458 4697 11148 HBL1_DMSO_200M_050219_2,11157 HBL1_DMSO_200M_050219_2,11157,LPAPIEKTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11158 60.237 140.0 379840.0 25 0 21055.0 + 43106 VYNYAEQTL 9 98 550.7668724451122 1099.5191919570243 2 550.7667114138603 MULTI CID FTMS 0 0 0 11148 325939.28125 0.0573885361154703 4 -0.3645401000976562 10 Unmodified _VYNYAEQTL_ ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 28.486842064014134 0.1687311288560894 4 [YV]NY 4 5 22.593 0.0 0.0 2.0548 0.0 0.0 0.0 557.2541522443868 557.2541522443868 -1.0511860543221552 0.0 -1.0511860543221552 0.0 0 0.0 1.6989700043360187 0.0 0.3252574989159953 + [YV]NY 2.0548 + + 370 1 1.452 49725.4 1.0 6459 4697 11148 HBL1_DMSO_200M_050219_2,11158 HBL1_DMSO_200M_050219_2,11158,VYNYAEQTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11159 60.239 118.0 522500.0 25 0 82535.0 + 14049 IALDSHPTI 9 98 483.7667592531376 0 483.7668334841728 PEAK CID FTMS 0 0 0 11148 202795.3125 0.3469530078884233 -2 0.175262451171875 11 Unmodified _IALDSHPTI_ ENSG00000115738|ENST00000396290|ID2 30.63653989081413 0.1077493867305487 4 {I|L}A{I|L} 3 6 15.674 0.0 0.0 1.6234 0.0 0.0 329.1933562974876 336.0948580377563 665.2882143352439 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}A{I|L} 1.6234 + + 152 + 1 1.452 50906.5 1.0 6460 4697 11148 HBL1_DMSO_200M_050219_2,11159 HBL1_DMSO_200M_050219_2,11159,IALDSHPTI True True IALDSHPTI 60.239008 483.766833484173 4033355.25 11148.0 ENSG00000115738|ENST00000396290|ID2 3.0571161111195884 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11160 60.253 800.0 324730.0 25 0 47771.0 + 45712 YYEFREEAY 9 151 635.2744865213976 1268.5344201095952 2 635.2753173708916 MULTI CID FTMS 0 0 0 11148 168869.03125 0.4986443205089674 -1 0.0949821472167968 12 Unmodified _YYEFREEAY_ ENSG00000214753|ENST00000301785|HNRNPUL2 57.24910588100465 0.0276051374632116 4 YYYY{I|L}C(Carbamidomethyl (C)){I|L}[DP] 9 7 + 84.28 0.0 0.0 6.6439 6.6439 85.471 0.0 0.0 0.0 42.628916811429335 6.13376837184731 6.13376837184731 7.160677999045717 0 0.3807196863200844 2.0 1.841129063296272 0.0 YYYY{I|L}C(Carbamidomethyl (C)){I|L}[DP];YYYY{I|L}[HN]AY;YYY{M(Oxidation (M))|F}K[HD]AY;YYYY{I|L}[CG]{I|L}[DP];YYYY{I|L}EMPQ;YYE{M(Oxidation (M))|F}HH[NP]Y;YYYY{I|L}C(Carbamidomethyl (C))E[VP];YYYYY[KS]GY;YYE{M(Oxidation (M))|F}[WH]{I|L}[DP];YYE{M(Oxidation (M))|F}HHTC(Carbamidomethyl (C)){I|L} 6.6439;6.0794;5.9621;5.918;5.7515;5.7299;5.667;5.6419;5.6012;5.4917 -;-;-;-;-;-;-;-;-;- 9049 + 1 1.452 189573.5 0.9200000166893004 6461 4697 11148 HBL1_DMSO_200M_050219_2,11160 HBL1_DMSO_200M_050219_2,11160,YYEFREEAY True True YYEFREEAY 60.25285 635.275317370892 2387286.0 11148.0 ENSG00000214753|ENST00000301785|HNRNPUL2 6.63465150197347 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11161 60.267 800.0 343870.0 25 0 64182.0 + 36258 SYFDPREAY 9 168 574.2562425715566 1146.4979322099132 2 574.2563354372978 MULTI CID FTMS 0 0 0 11148 170016.5 0.400347120249292 -2 0.175262451171875 13 Unmodified _SYFDPREAY_ ENSG00000122692|ENST00000397149|SMU1;ENST00000379752.5_1_1:157029999-157030212:-|nuORF 43.77239144664712 0.0547478964384323 4 [TA]{I|L}WYD{M(Oxidation (M))|F}[MT] 9 9 + 40.549 0.0 0.0 3.5368 3.5368 67.186 0.0 0.0 0.0 2.489134451139826 5.612602866347316 2.489134451139826 2.489134451139826 0 0.6861818737241735 0.3872161432802645 0.7887254899964358 0.0 [TA]{I|L}WYD{M(Oxidation (M))|F}[MT];[{I|L}T]AWYD{M(Oxidation (M))|F}[MT];[TA]{I|L}GEYD{M(Oxidation (M))|F}[MT];[VS]VWYD{M(Oxidation (M))|F}[MT];[{I|L}T]QEYD{M(Oxidation (M))|F}[MT];{[TV]|[{I|L}S]}[RD]YD{M(Oxidation (M))|F}[MT];[VG][VS]EYD{M(Oxidation (M))|F}[MT];[{I|L}T]AGEYD{M(Oxidation (M))|F}[MT];[VS]VGEYD{M(Oxidation (M))|F}[MT];{[QN]|[E{I|L}]|[KN]}S[HA]PD{M(Oxidation (M))|F}[MT] 3.5368;3.3197;3.3188;3.2911;3.2802;3.1278;3.1262;3.1017;3.0731;3.0414 -;-;-;-;-;-;-;-;-;- 1585 1 1.452 208213.7 0.8999999761581421 6462 4697 11148 HBL1_DMSO_200M_050219_2,11161 HBL1_DMSO_200M_050219_2,11161,SYFDPREAY True True SYFDPREAY 60.266681 574.256335437298 4154102.5 11148.0 ENST00000379752.5_1_1:157029999-157030212:-|nuORF;;ENSG00000122692|ENST00000397149|SMU1 9.269798596700031 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11162 60.28 800.0 259680.0 25 0 14709.0 + 44681 YPFKPPKV 8 202 488.2868778785377 974.5592028238756 2 488.2865478396416 MULTI CID FTMS 0 0 0 11148 127819.9453125 0.0042035664001479 22 -2.1051597595214844 14 Unmodified _YPFKPPKV_ ENSG00000078967|ENST00000222402|UBE2D4;ENSG00000109332|ENST00000453744|UBE2D3;ENSG00000131508|ENST00000398733|UBE2D2;ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENST00000511691.1_1_5:138980019-139003047:+|nuORF;nc|ENSG00000109332|P61077-2|UBE2D3;nc|ENSG00000109332|P61077-3|UBE2D3;nc|ENSG00000131508|P62837-2|UBE2D2;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 34.10243960390752 0.3329570729325616 4 YP{M(Oxidation (M))|F}KPKPV 8 2 + 65.384 0.0 0.0 6.7091 6.7091 59.363 0.0 0.0 0.0 33.25644237417693 9.01410180942166 9.01410180942166 0.0 0 0.7614393726401688 2.0 0.0 0.0 YP{M(Oxidation (M))|F}KPKPV;YP{M(Oxidation (M))|F}KPPKV;YP{M(Oxidation (M))|F}KPKVP;YP{M(Oxidation (M))|F}KV[KP]P;[{I|L}T]KPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[KP]PYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[RE]|[WV]}KAV;[{I|L}P][KT]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[KP]PK{M(Oxidation (M))|F}PYV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6.7091;6.7091;5.636;5.0558;3.571;2.7728;2.4291;2.3581;2.1675;1.8573 -;+;-;-;-;-;-;-;-;- + 1279 + 1 1.452 154732.8 0.7400000095367432 6463 4697 11148 HBL1_DMSO_200M_050219_2,11162 HBL1_DMSO_200M_050219_2,11162,YPFKPPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11163 60.294 800.0 207760.0 25 0 17891.0 + -1 DAFAAAKL 8 186 403.2305205071299 402.2232440405299 1 403.2320129275322 MULTI CID FTMS 0 0 0 11148 111962.359375 0.6799373996783634 3 -0.2621726989746094 15 ENSG00000103257|ENST00000261622|SLC7A5 4 {I|L}[RD] 3 -1 + 13.468 0.0 0.0 3.3484 3.3484 73.101 0.0 0.0 0.0 3.553041558740466 1.6283991342171316 1.6283991342171316 7.1600334363479945 0 0.0 0.0 0.0 0.0 {I|L}[RD];[RD]{I|L};[KA]{[QG]|[NA]} 3.3484;1.5682;1.0838 -;-;- 33 + 1 1.452 129692.6 0.5600000023841858 6464 4697 11148 HBL1_DMSO_200M_050219_2,11163 HBL1_DMSO_200M_050219_2,11163, False False DAFAAAKL 60.294316 403.232012927532 0.0 11148.0 ENSG00000103257|ENST00000261622|SLC7A5 1.7212628523508708 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11164 60.31 800.0 287510.0 25 0 16192.0 + 14841 ILGGPGTVQGV 11 245 499.2875991042045 996.560645275209 2 499.2877075076103 MULTI CID FTMS 0 0 0 11148 89402.9921875 0.0388320510009777 13 -1.294219970703125 16 Unmodified _ILGGPGTVQGV_ ENSG00000173992|ENST00000533244|CCS;ENST00000526066.5_1_11:66366934-66367108:+|nuORF 30.63653989081413 0.3728473165938781 4 QGV 3 8 16.145 0.0 0.0 1.6201 0.0 0.0 694.4011126597778 0.0 694.4011126597778 0.0 1.040528826671835 0.0 0.0 0 0.25 0.0 0.0 0.0 + QGV 1.6201 + + 1343 + 1 1.452 170373.8 0.6100000143051147 6465 4697 11148 HBL1_DMSO_200M_050219_2,11164 HBL1_DMSO_200M_050219_2,11164,ILGGPGTVQGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11166 60.314 21.0 2425400.0 25 0 487500.0 42704 VVAAAAFA 8 84 360.20701350576365 718.3994740783273 2 360.2065612673759 MULTI CID FTMS 0 0 0 11165 2546114.0 0.6956767171649519 1 -0.0851936340332031 1 Unmodified _VVAAAAFA_ ENSG00000174326|ENST00000574600|SLC16A11;nc|ENSG00000174326|Q8NCK7|SLC16A11 0.0 0.8243325171867699 4 A 1 7 2.2185 0.0 0.0 0.30881 0.0 0.0 365.1903503984429 279.14521204166255 644.3355624401055 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.30881 + + 1 + 1 1.452 44441.6 1.0 6466 4698 11165 HBL1_DMSO_200M_050219_2,11166 HBL1_DMSO_200M_050219_2,11166,VVAAAAFA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11167 60.315 38.0 1468600.0 25 0 190660.0 + 3598 DAAMKAMTI 9 87 476.2352813221335 950.4560097110668 2 476.2356445193291 MULTI CID FTMS 0 0 0 11165 1499675.875 0.9665790273404404 1 -0.0851936340332031 2 Unmodified _DAAMKAMTI_ ENSG00000160710|ENST00000368474|ADAR;nc|ENSG00000160710|P55265-2|ADAR;nc|ENSG00000160710|P55265-3|ADAR;nc|ENSG00000160710|P55265-4|ADAR;nc|ENSG00000160710|P55265-5|ADAR 43.77239144664712 0.0547478964384323 4 {[DA]|[EG]}A[YV]TAW 8 6 48.294 0.0 0.0 5.0811 0.0 0.0 0.0 70.03058801822499 70.03058801822499 20.0570365251474 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 {[DA]|[EG]}A[YV]TAW 5.0811 - 325 + 1 1.452 49850.9 1.0 6467 4698 11165 HBL1_DMSO_200M_050219_2,11167 HBL1_DMSO_200M_050219_2,11167,DAAMKAMTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11168 60.317 47.0 1332500.0 25 0 213270.0 + 4058 DALVTKNLV 9 77 486.7897930947789 971.565033256358 2 486.7903015017509 MULTI CID FTMS 0 0 0 11165 1257338.875 0.0844345110843646 -3 0.2710685729980469 3 Unmodified _DALVTKNLV_ ENSG00000105202|ENST00000221801|FBL;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 57.72198328787511 0.0273433238377839 4 {[DA]|[EG]}{I|L}VTK 6 3 56.292 0.0 0.0 5.7939 0.0 0.0 0.0 341.18406091861567 341.18406091861567 12.105444068138516 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.805462187404089 0.4247425010840047 + {[DA]|[EG]}{I|L}VTK 5.7939 + + 948 + 1 1.452 54558.3 1.0 6468 4698 11165 HBL1_DMSO_200M_050219_2,11168 HBL1_DMSO_200M_050219_2,11168,DALVTKNLV True True DALVTKNLV 60.31661 486.790301501751 105288112.0 11165.0 ENSG00000105202|ENST00000221801|FBL;;ENST00000599159.1_1_19:40329665-40336940:-|nuORF 4.705359776814778 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11169 60.318 56.0 891450.0 25 0 83106.0 + 22122 LPPPVQTQI 9 87 496.7926827535134 991.5708125738269 2 496.7925292849541 MULTI CID FTMS 0 0 0 11165 887513.0625 0.2222876360928194 16 -1.5912361145019531 4 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 30.22481116460888 0.1466181017706357 4 [{I|L}P]PNP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]} 9 5 + 47.853 0.0 0.0 4.826 4.826 74.414 0.0 0.0 0.0 25.0 4.137342758552691 4.137342758552691 3.979400086720375 0 0.5 2.0 0.0 0.0 [{I|L}P]PNP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPVQD{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPN{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PGGP{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PPV[AG]D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PNP[QT]{I|L}{I|L};[{I|L}P]PPGG{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PN[QT]P{I|L}{I|L};[{I|L}P]PPN[QT]{I|L}{I|L};[{I|L}P]PGGP[QT]{I|L}{I|L} 4.826;4.4247;4.1211;3.8974;3.496;3.3646;3.1925;3.187;2.6597;2.436 -;-;-;-;-;-;-;-;-;- 353 1 1.452 41472.6 1.0 6469 4698 11165 HBL1_DMSO_200M_050219_2,11169 HBL1_DMSO_200M_050219_2,11169,LPPPVQTQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11170 60.32 83.0 925140.0 25 0 58328.0 29921 QSIIRPLTV 9 104 513.8188749077024 1025.6231968822046 2 513.8193237185478 MULTI CID FTMS 0 0 0 11165 670746.6875 0.3919197450157254 2 -0.1663665771484375 5 Unmodified _QSIIRPLTV_ ENSG00000172139|ENST00000305815|SLC9C1;nc|ENSG00000172139|Q4G0N8-2|SLC9C1 24.020572477871973 0.2255576514309169 4 {[TV]|[{I|L}S]}[RP]{I|L}{I|L}QTV 9 4 + 44.79 0.0 0.0 4.3671 4.3671 79.024 0.0 0.0 0.0 3.222281142179213 26.164186853515968 3.222281142179213 9.208187539523747 0 0.75 1.0969100130080565 0.0 0.0 {[TV]|[{I|L}S]}[RP]{I|L}{I|L}QTV;{[TV]|[{I|L}S]}[RP]{I|L}{I|L}[AG]TV;[PS][R{I|L}]{I|L}{I|L}QTV;[NP]VKK{I|L}QTV;[PS][R{I|L}]{I|L}{I|L}[AG]TV;[NP]VKK{I|L}[AG]TV 4.3671;3.4693;3.0041;2.7225;2.1063;1.8247 -;-;-;-;-;- 288 1 1.452 65362.7 1.0 6470 4698 11165 HBL1_DMSO_200M_050219_2,11170 HBL1_DMSO_200M_050219_2,11170,QSIIRPLTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11171 60.322 95.0 791260.0 25 0 170680.0 + 27783 LPPPPPPLA 9 81 449.7732923312103 897.5320317292206 2 449.7735778689384 MULTI CID FTMS 0 0 0 11165 664381.125 0.79544643664234 -4 0.3814964294433594 6 Unmodified _PLPPPPPLA_ ENSG00000068489|ENST00000262293|PRR11 67.41302359171755 0.0220989861905124 4 [{I|L}P]PPPP 6 3 57.708 0.0 0.0 6.4296 0.0 0.0 0.0 296.1617578280504 296.1617578280504 43.72872192056825 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.0 0.0 + [{I|L}P]PPPP 6.4296 + + 121 1 1.452 64279.3 1.0 6471 4698 11165 HBL1_DMSO_200M_050219_2,11171 HBL1_DMSO_200M_050219_2,11171,PLPPPPPLA False False LPPPPPPLA 60.321972 449.773577868938 36369692.0 11165.0 ENSG00000068489|ENST00000262293|PRR11 4.682170867919922 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11172 60.324 74.0 718390.0 25 0 58981.0 + 28799 PYQLSPLCPC 10 89 560.7603241694658 1119.5060954057317 2 560.7617065310478 MULTI CID FTMS 0 0 0 11165 527151.1875 1.0 0 0.0 7 Unmodified _PYQLSPLCPC_ REV__ENST00000403909.2_1_6:139659701-139659794:+|nuORF 10.073929032068715 0.6785112666868882 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}PAP{I|L} 8 -1 52.189 0.0 0.0 4.6618 0.0 0.0 0.0 237.0031997209634 237.0031997209634 36.581079205375744 0.0 0.0 0.0 0 1.424742501084005 1.3010299956639813 0.0 0.805462187404089 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}PAP{I|L} 4.6618 - 199 1 1.452 48008.2 1.0 6472 4698 11165 HBL1_DMSO_200M_050219_2,11172 HBL1_DMSO_200M_050219_2,11172,PYQLSPLCPC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11173 60.335 629.0 295010.0 25 0 71573.0 + -1 MFCDEGVMF 9 141 584.2111179237847 1166.4076829143694 2 584.2119018435478 MULTI CID FTMS 0 0 0 11165 365228.0 0.2298018221346304 -2 0.1907882690429687 8 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))FC(Carbamidomethyl (C))DEGVM(Oxidation (M))F_ REV__L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|172|2|anti-sense 18.13498045792455 0.3457906370836843 4 SSADMYV 7 -1 71.608 0.0 0.0 6.1392 0.0 0.0 395.0982228009781 0.0 395.0982228009781 0.0 20.36105271250128 0.0 0.0 0 0.9247425010840048 0.0 2.0545970543767127 0.0 SSADMYV 6.1392 - 1176 1 1.452 140132.0 1.0 6473 4698 11165 HBL1_DMSO_200M_050219_2,11173 HBL1_DMSO_200M_050219_2,11173,MFCDEGVMF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11174 60.338 147.0 433760.0 25 0 61169.0 37342 TIYYGEQRST 10 92 609.2946883327547 1216.5748237323094 2 609.2950317263603 MULTI CID FTMS 0 0 0 11165 327164.09375 0.207031240421401 -2 0.1907882690429687 9 Unmodified _TIYYGEQRST_ ENSG00000127083|ENST00000375550|OMD 18.1463463914782 0.5430639438673815 4 [{I|L}T][DC]{M(Oxidation (M))|F}GV{M(Oxidation (M))|F}KST 11 6 + 56.732 0.0 0.0 4.6633 4.6633 83.839 0.0 0.0 0.0 38.10149343570384 22.12994276995527 22.12994276995527 20.753800256993948 0 0.4247425010840047 2.0 1.0994850021680094 0.0 [{I|L}T][DC]{M(Oxidation (M))|F}GV{M(Oxidation (M))|F}KST;[{I|L}T][DC]{M(Oxidation (M))|F}GP[HA]RT;[{I|L}T]{[WN]|[YH]}[YR]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]A[WH][QP]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]A[WY][RN]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]A[TP]PG{M(Oxidation (M))|F}[DC][VP];[{I|L}T]A{[MS]|[{M(Oxidation (M))|F}A]}Y[YQ][Q{I|L}];{[QN]|[E{I|L}]|[KN]}[Q{I|L}]PG{M(Oxidation (M))|F}[DC][VP];[VG]{[WT]|[RM]}A[YR]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]PGC(Carbamidomethyl (C))C(Carbamidomethyl (C))[Q{I|L}] 4.6633;2.9573;2.67;2.4646;1.7829;1.7776;1.7232;1.5362;1.2839;1.1016 -;-;-;-;-;-;-;-;-;- 936 + 1 1.452 55137.9 1.0 6474 4698 11165 HBL1_DMSO_200M_050219_2,11174 HBL1_DMSO_200M_050219_2,11174,TIYYGEQRST False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11175 60.341 163.0 710560.0 25 0 60331.0 + 10528 FVDPAQITM 9 136 519.2518293743337 1036.4891058154674 2 519.2528564333916 MULTI CID FTMS 0 0 0 11165 291941.75 0.3339299805278262 -3 0.2710685729980469 10 Oxidation (M) _FVDPAQITM(Oxidation (M))_ ENSG00000167325|ENST00000300738|RRM1 51.629811660486645 0.0367964933207742 4 [Q{I|L}][C(Carbamidomethyl (C))K]Q{I|L}T{M(Oxidation (M))|F} 8 5 [Q{I|L}][C(Carbamidomethyl (C))K]Q + + 33.095 4.137 0.62938 3.193 3.193 46.35 0.0 0.0 0.0 0.0 19.833178637252274 0.0 0.0 0 0.8807196863200843 0.0 0.6307196863200843 0.0 [Q{I|L}][C(Carbamidomethyl (C))K]Q{I|L}T{M(Oxidation (M))|F} 3.193 - 531 + 1 1.452 91410.9 1.0 6475 4698 11165 HBL1_DMSO_200M_050219_2,11175 HBL1_DMSO_200M_050219_2,11175,FVDPAQITM True False FVDPAQITM 60.340855 519.252856433392 9932397.0 11165.0 ENSG00000167325|ENST00000300738|RRM1 7.150195757548015 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11176 60.346 278.0 346420.0 25 0 17007.0 + 41887 VQANSGAIVKL 11 133 550.3268870937153 1098.6392212542305 2 550.3278686404228 MULTI CID FTMS 0 0 0 11165 268403.1875 0.9190625091623734 1 -0.0851936340332031 11 Unmodified _VQANSGAIVKL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 55.23464941255904 0.0886405999673349 4 {[QV]|[N{I|L}]|[RA]|[KV]}ANSQ{I|L}VK{I|L} 10 2 {[QV]|[N{I|L}]|[RA]|[KV]} + + 44.22 21.695 9.5518 4.0249 4.0249 48.73 0.0 0.0 0.0 0.0 27.564119211036623 0.0 0.0 0 1.086696871556164 0.0 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}ANSQ{I|L}VK{I|L} 4.0249 - 1046 + 1 1.452 82421.2 1.0 6476 4698 11165 HBL1_DMSO_200M_050219_2,11176 HBL1_DMSO_200M_050219_2,11176,VQANSGAIVKL True True VQANSGAIVKL 60.345982 550.327868640423 5322603.5 11165.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 6.3127133051554365 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11177 60.348 102.0 543370.0 25 0 81655.0 + 4468 DAYALNHTL 9 99 509.2535253747258 1016.4924978162516 2 509.2526733279228 MULTI CID FTMS 0 0 0 11165 237586.25 0.0007831311397606 27 -2.652942657470703 12 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 53.832793166522166 0.0319663582346103 4 {[DA]|[EG]}YA{I|L}[HQ]TV 9 2 + 65.869 0.0 0.0 6.48 6.48 73.995 0.0 0.0 0.0 20.246586506634472 0.1849178312658494 0.1849178312658494 0.1849178312658494 0 0.8494850021680094 1.6989700043360187 1.2302046884880935 0.0 {[DA]|[EG]}YA{I|L}[HQ]TV;{[DA]|[EG]}YA{I|L}N[HT]{I|L};{[DA]|[EG]}YA{I|L}[HQ]S{I|L};{[DA]|[EG]}YA{I|L}GG[HT]{I|L} 6.48;6.4618;6.4141;5.5559 -;+;-;- + 436 + 1 1.452 44189.4 1.0 6477 4698 11165 HBL1_DMSO_200M_050219_2,11177 HBL1_DMSO_200M_050219_2,11177,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11178 60.362 800.0 245940.0 25 0 10916.0 + 32055 RVLEIIKQGV 10 190 577.8684685322066 1153.7223841312132 2 578.3723022341728 MULTI CID FTMS 0 0 0 11165 196787.671875 0.9974322145994792 1 -0.0851936340332031 13 Unmodified _RVLEIIKQGV_ ENSG00000141627|ENST00000675505|DYM;ENST00000583270.1_1_18:46623573-46623861:-|nuORF;nc|ENSG00000141627|Q7RTS9-2|DYM;nc|ENSG00000141627|Q7RTS9|DYM 28.49450938151212 0.328477364964909 4 {[QN]|[E{I|L}]|[KN]}GVV{I|L}{I|L}KE 9 8 35.3 0.0 0.0 3.0597 0.0 0.0 0.0 170.0775421012784 170.0775421012784 16.650626239047693 0.0 0.0 0.0 0 0.805462187404089 1.3010299956639813 0.4247425010840047 0.2742275032520141 {[QN]|[E{I|L}]|[KN]}GVV{I|L}{I|L}KE 3.0597 - 457 1 1.452 147533.2 0.8799999952316284 6478 4698 11165 HBL1_DMSO_200M_050219_2,11178 HBL1_DMSO_200M_050219_2,11178,RVLEIIKQGV False True RVLEIIKQGV 60.361989 578.372302234173 1390787.75 11165.0 nc|ENSG00000141627|Q7RTS9-2|DYM;;nc|ENSG00000141627|Q7RTS9|DYM;;ENST00000583270.1_1_18:46623573-46623861:-|nuORF;;ENSG00000141627|ENST00000675505|DYM 3.046298782030741 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11179 60.368 318.0 355510.0 25 0 34480.0 + -1 GDGPGHCD 8 131 407.6423205500328 813.2700881668655 2 407.6425659060478 MULTI CID FTMS 0 0 0 11165 181783.546875 1.0 0 0.0 14 Carbamidomethyl (C) _GDGPGHC(Carbamidomethyl (C))D_ REV__ENST00000427358.3_1_16:1876946-1877183:+|nuORF 0.0 0.8243325171867699 4 [Y{I|L}]MD 4 -1 27.703 0.0 0.0 3.4064 0.0 0.0 0.0 288.0386177901656 288.0386177901656 12.129843661361406 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}]MD 3.4064 - 73 1 1.452 91672.0 1.0 6479 4698 11165 HBL1_DMSO_200M_050219_2,11179 HBL1_DMSO_200M_050219_2,11179,GDGPGHCD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11180 60.373 290.0 346740.0 25 0 14694.0 + 44831 YPNRGFPKI 9 114 546.3042286962449 1090.5939044592897 2 546.3042480349541 MULTI CID FTMS 0 0 0 11165 165675.21875 0.821203395343794 2 -0.1663665771484375 15 Unmodified _YPNRGFPKI_ ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR 25.399314129420983 0.2080152500878129 4 KPY{I|L} 4 7 20.177 0.0 0.0 1.8501 0.0 0.0 571.2845326154312 0.0 571.2845326154312 0.0 -3.979400086720375 -3.979400086720375 0.0 0 0.0 0.0 0.0 0.0 KPY{I|L} 1.8501 - 170 1 1.452 81628.1 1.0 6480 4698 11165 HBL1_DMSO_200M_050219_2,11180 HBL1_DMSO_200M_050219_2,11180,YPNRGFPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11181 60.387 800.0 166720.0 25 0 9467.4 23081 LSLSSCDSFEL 11 173 600.7748072761125 1199.5350616190249 2 600.7759887576103 MULTI CID FTMS 0 0 0 11165 112291.0234375 0.0556937518506137 5 -0.4569625854492187 16 Unmodified _LSLSSCDSFEL_ ENSG00000144655|ENST00000273153|CSRNP1 16.149105407346934 0.6992268271266642 4 [{I|L}T]V[NG]D{I|L}KVE 10 9 39.983 0.0 0.0 3.3332 0.0 0.0 0.0 127.9306098412027 127.9306098412027 12.947433202820632 0.0 0.0 0.0 0 0.5 2.0 0.7614393726401688 0.0 [{I|L}T]V[NG]D{I|L}KVE 3.3332 - 2799 1 1.452 97174.2 0.7200000286102295 6481 4698 11165 HBL1_DMSO_200M_050219_2,11181 HBL1_DMSO_200M_050219_2,11181,LSLSSCDSFEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11182 60.395 352.0 300320.0 25 0 29326.0 32547 SAPLVAKL 8 145 399.7578094635578 797.5010659939156 2 399.7578307986259 MULTI CID FTMS 0 0 0 11165 110965.8203125 0.9370938990370123 -1 0.0958061218261718 17 Unmodified _SAPLVAKL_ ENSG00000177694|ENST00000454872|NAALADL2;ENST00000414826.1_1_3:175165060-175177849:+|nuORF;ENST00000473253.5_1_3:174581768-175298945:+|nuORF 18.13498045792455 0.6430038125133779 4 {[SA]|[TG]}P{I|L} 4 4 29.085 0.0 0.0 3.6471 0.0 0.0 0.0 426.2720215592221 426.2720215592221 6.692066049390206 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 + {[SA]|[TG]}P{I|L} 3.6471 + + 248 + 1 1.452 85475.8 1.0 6482 4698 11165 HBL1_DMSO_200M_050219_2,11182 HBL1_DMSO_200M_050219_2,11182,SAPLVAKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11184 60.406 451.0 391290.0 25 0 80906.0 -1 0 79 1082.0939501965336 3243.2600211898007 3 1082.429125964642 MULTI CID FTMS 0 0 0 11183 557269.875 0.7073337886361154 1 -0.0811729431152343 1 4 YG[WY]R{I|L}T 7 -1 25.438 0.0 0.0 0.78432 0.0 0.0 1781.6017703126506 519.1884859674436 2300.790256280094 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.4247425010840047 YG[WY]R{I|L}T 0.78432 - 942 + 1 1.464 149434.6 1.0 6483 4699 11183 HBL1_DMSO_200M_050219_2,11184 HBL1_DMSO_200M_050219_2,11184, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11185 60.408 50.0 1906400.0 25 0 358040.0 + 10086 FPSEIVGKRI 10 81 382.5607490996201 1144.6604178990603 3 382.5607177615166 MULTI CID FTMS 0 0 0 11183 1111856.375 0.3094639882605592 -2 0.180999755859375 2 Unmodified _FPSEIVGKRI_ ENSG00000171863|ENST00000645674|RPS7;ENST00000415804.2_1_4:4509290-4509386:+|nuORF;ENST00000426405.1_1_X:73629614-73629932:+|nuORF;ENST00000463499.1_1_4:42474097-42474295:+|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF 33.82136114134338 0.222812100547209 4 {M(Oxidation (M))|F}PSE{I|L}VGK[R{I|L}] 10 0 + 60.187 0.0 0.0 5.2581 5.2581 81.096 0.0 0.0 0.0 24.653251936605955 4.437179091548899 4.437179091548899 8.57840941039747 0 0.9163865622122672 0.0 0.0 0.2887254899964357 + + {M(Oxidation (M))|F}PSE{I|L}VGK[R{I|L}];{M(Oxidation (M))|F}PS{I|L}EVGK[R{I|L}];{M(Oxidation (M))|F}P{I|L}C{I|L}RK[R{I|L}];{M(Oxidation (M))|F}P{I|L}SEVGK[R{I|L}];{M(Oxidation (M))|F}{I|L}PC{I|L}RK[R{I|L}];{M(Oxidation (M))|F}{I|L}PSEVGK[R{I|L}];{M(Oxidation (M))|F}P{I|L}WWK[R{I|L}];{M(Oxidation (M))|F}{I|L}PWWK[R{I|L}] 5.2581;4.5087;4.196;4.0173;3.6935;3.5147;1.9224;1.4198 +;-;-;-;-;-;-;- + 323 + 1 1.464 87799.4 1.0 6484 4699 11183 HBL1_DMSO_200M_050219_2,11185 HBL1_DMSO_200M_050219_2,11185,FPSEIVGKRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11186 60.409 54.0 1882100.0 25 0 157830.0 + 24779 MPHSIMRI 8 95 328.8421114202371 983.5045048609112 3 328.8419372439384 MULTI CID FTMS 0 0 0 11183 1075581.125 0.4177840722271067 -2 0.180999755859375 3 Unmodified _MPHSIMRI_ ENSG00000138107|ENST00000369905|ACTR1A;ENST00000480947.1_1_10:104243895-104247966:-|nuORF 26.268140514670165 0.4916104673212489 4 MPH{I|L}S{I|L}RM 8 3 + 66.037 0.0 0.0 6.7145 6.7145 85.478 0.0 0.0 0.0 57.11129775960646 3.2783248807594845 3.2783248807594845 6.817496819840656 0 0.5242275032520141 0.0 1.566901560044258 0.0 MPH{I|L}S{I|L}RM;MPHS{I|L}{I|L}RM;MP{I|L}HS{I|L}RM;MPH{I|L}SRM{I|L};M{I|L}PHS{I|L}RM;MPHS{I|L}RM{I|L};MP{I|L}HSRM{I|L};M{I|L}PHSRM{I|L};MPH{I|L}[{I|L}A][R{M(Oxidation (M))|F}];MP{I|L}H[{I|L}A][R{M(Oxidation (M))|F}] 6.7145;6.0213;5.7671;5.6198;5.0985;4.9266;4.6724;4.0038;2.8374;2.2771 -;-;-;-;-;-;-;-;-;- 282 + 1 1.464 87352.2 1.0 6485 4699 11183 HBL1_DMSO_200M_050219_2,11186 HBL1_DMSO_200M_050219_2,11186,MPHSIMRI False True MPHSIMRI 60.409172 328.841937243938 19345768.0 11183.0 ENST00000480947.1_1_10:104243895-104247966:-|nuORF;;ENSG00000138107|ENST00000369905|ACTR1A 1.568487584590912 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11187 60.41 45.0 1222900.0 25 0 102580.0 + 36318 SYLPEAGQY 9 97 514.2395375993992 1026.4645222655984 2 514.2405883669853 MULTI CID FTMS 0 0 0 11183 1026910.0625 0.7296645265384982 -1 0.0851936340332031 4 Unmodified _SYLPEAGQY_ ENSG00000148110|ENST00000375344|MFSD14B;ENSG00000156875|ENST00000370152|MFSD14A;nc|ENSG00000148110|Q5SR56-2|MFSD14B 30.63653989081413 0.1413794767160703 4 {[{M(Oxidation (M))|F}C]|[YS]}{I|L}[EP]QQY 8 2 + 24.231 0.0 0.0 2.3606 2.3606 64.457 0.0 0.0 0.0 1.2814469716013122 1.535432911546792 1.2814469716013122 2.2454626555970947 0 0.7742275032520141 0.0 0.0 0.7614393726401688 {[{M(Oxidation (M))|F}C]|[YS]}{I|L}[EP]QQY;{[QD]|[EN]|[WG]|[KD]|[RS]}Q[YE]{I|L}[MT];[EP]AGQ{[{M(Oxidation (M))|F}C]|[YS]}[Y{I|L}];[EP][NP][EP]{I|L}[MT];[AG]YWW{I|L}[MT];[EP]QQ{[{M(Oxidation (M))|F}C]|[YS]}[Y{I|L}];[AG]G[VS][YE]{I|L}[MT];{[{M(Oxidation (M))|F}C]|[YS]}{I|L}[WK][PS]{M(Oxidation (M))|F};[YQ]WW{I|L}[MT];{[QG]|[NA]}[VS][YE]{I|L}[MT] 2.3606;2.1418;2.1363;2.0989;1.8349;1.7984;1.4745;1.4031;1.3652;1.3638 -;-;-;-;-;-;-;-;-;- 326 + 1 1.464 49657.1 1.0 6486 4699 11183 HBL1_DMSO_200M_050219_2,11187 HBL1_DMSO_200M_050219_2,11187,SYLPEAGQY False True SYLPEAGQY 60.410422 514.240588366985 11469237.0 11183.0 nc|ENSG00000148110|Q5SR56-2|MFSD14B;;ENSG00000156875|ENST00000370152|MFSD14A;;ENSG00000148110|ENST00000375344|MFSD14B 6.242031733194987 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11188 60.412 54.0 1048200.0 25 0 99925.0 + 3910 DALEDFKKV 9 84 532.7848398352681 1063.5551267373362 2 532.7847778201103 MULTI CID FTMS 0 0 0 11183 727069.125 0.3365082786704003 -2 0.180999755859375 5 Unmodified _DALEDFKKV_ ENSG00000183891|ENST00000333610|TTC32 36.506200033944 0.094635877243972 4 {[DA]|[EG]}{I|L}ED{M(Oxidation (M))|F}KKV 9 0 + 79.619 0.0 0.0 7.4862 7.4862 94.35 0.0 0.0 0.0 39.15160331023991 11.082268588648247 11.082268588648247 20.16736697407653 0 1.1549471895720984 1.6989700043360187 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}ED{M(Oxidation (M))|F}KKV;VEAED{M(Oxidation (M))|F}KKV;{[DA]|[EG]}{I|L}[{M(Oxidation (M))|F}V]DK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};W{I|L}[{M(Oxidation (M))|F}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}KV;V{[MS]|[{M(Oxidation (M))|F}A]}V[C(Carbamidomethyl (C))N]KKV;V{[MS]|[{M(Oxidation (M))|F}A]}VEDK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};VEA[{M(Oxidation (M))|F}V]DK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};V{[MS]|[{M(Oxidation (M))|F}A]}VWW{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7.4862;5.5899;3.8648;3.0638;2.3574;2.3118;1.9686;1.3285 +;-;-;-;-;-;-;- + 274 + 1 1.464 52713.2 1.0 6487 4699 11183 HBL1_DMSO_200M_050219_2,11188 HBL1_DMSO_200M_050219_2,11188,DALEDFKKV True True DALEDFKKV 60.411828 532.78477782011 15226880.0 11183.0 ENSG00000183891|ENST00000333610|TTC32 6.910849730173747 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11189 60.414 103.0 938040.0 25 0 140740.0 + 25774 NIVPVIAKA 9 96 462.7978579491473 923.5811629650948 2 462.7983581423759 MULTI CID FTMS 0 0 0 11183 551612.3125 0.7792234267531231 -1 0.0851936340332031 6 Unmodified _NIVPVIAKA_ ENSG00000168385|ENST00000391971|SEPTIN2;ENSG00000184640|ENST00000427177|SEPTIN9;ENST00000592481.5_1_17:75447336-75492345:+|nuORF;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;nc|ENSG00000184640|Q9UHD8-3|SEPTIN9;nc|ENSG00000184640|Q9UHD8-4|SEPTIN9;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9;nc|ENSG00000184640|Q9UHD8-8|SEPTIN9;nc|ENSG00000184640|Q9UHD8-9|SEPTIN9 36.12702656103203 0.0967173616627612 4 {[QV]|[N{I|L}]|[RA]|[KV]}VPV{I|L}A[KA] 9 0 + 49.988 0.0 0.0 5.4124 5.4124 82.259 0.0 0.0 0.0 13.07660078222966 4.493106925747412 4.493106925747412 9.131806016604358 0 0.8494850021680094 2.0 0.0 0.1861818737241735 + + {[QV]|[N{I|L}]|[RA]|[KV]}VPV{I|L}A[KA];{[QV]|[N{I|L}]|[RA]|[KV]}VPV[KG]VV 5.4124;4.4237 +;- + 218 + 1 1.464 77530.4 1.0 6488 4699 11183 HBL1_DMSO_200M_050219_2,11189 HBL1_DMSO_200M_050219_2,11189,NIVPVIAKA True True NIVPVIAKA 60.414022 462.798358142376 4859422.0 11183.0 nc|ENSG00000184640|Q9UHD8-3|SEPTIN9;;nc|ENSG00000168385|Q15019-3|SEPTIN2;;ENST00000592481.5_1_17:75447336-75492345:+|nuORF;;nc|ENSG00000184640|Q9UHD8-5|SEPTIN9;;ENSG00000184640|ENST00000427177|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-2|SEPTIN9;;nc|ENSG00000168385|Q15019-2|SEPTIN2;;nc|ENSG00000184640|Q9UHD8-7|SEPTIN9;;ENSG00000168385|ENST00000391971|SEPTIN2;;nc|ENSG00000184640|Q9UHD8-4|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-8|SEPTIN9;;nc|ENSG00000184640|Q9UHD8-9|SEPTIN9 6.681551774342855 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11190 60.417 145.0 912690.0 25 0 144380.0 + 10061 FPRHIEPEL 9 117 379.8732872133636 1136.5980322402909 3 379.8730956912041 MULTI CID FTMS 0 0 0 11183 478786.71875 0.0836239223711637 -2 0.180999755859375 7 Unmodified _FPRHIEPEL_ ENSG00000122674|ENST00000325974|CCZ1;ENSG00000146574|ENST00000316731|CCZ1B 30.7034409873982 0.1405282614900322 4 [EP]{I|L}[TP]{I|L}EPE{I|L} 10 4 + 64.007 0.0 0.0 5.6314 5.6314 73.791 0.0 0.0 0.0 17.275071725447404 38.01583669858815 17.275071725447404 1.7609125905568137 0 0.6861818737241735 1.6989700043360187 0.7302046884880937 0.0 [EP]{I|L}[TP]{I|L}EPE{I|L};[EP]{I|L}[RH]{M(Oxidation (M))|F}PE{I|L};[EP]{I|L}[RH]P{M(Oxidation (M))|F}E{I|L};[EP]{I|L}[RH]M{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}P[TP]{I|L}EPE{I|L};[EP]{I|L}[TP][EP]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}P[RH]{M(Oxidation (M))|F}PE{I|L};[H{I|L}]{[WT]|[RM]}{I|L}EPE{I|L};{[QN]|[E{I|L}]|[KN]}P[RH]P{M(Oxidation (M))|F}E{I|L};[EP]{I|L}[RH]E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L} 5.6314;5.4765;4.9042;4.5541;3.887;3.7439;3.732;3.2602;3.1597;3.0245 -;-;-;-;-;-;-;-;-;- 513 1 1.464 116625.2 1.0 6489 4699 11183 HBL1_DMSO_200M_050219_2,11190 HBL1_DMSO_200M_050219_2,11190,FPRHIEPEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11191 60.42 125.0 789280.0 25 0 92824.0 + 10062 FPRHIEPEL 9 88 569.3061529013178 1136.5977528694357 2 569.3063842654228 MULTI CID FTMS 0 0 0 11183 402201.03125 0.0700239966938033 -2 0.180999755859375 8 Unmodified _FPRHIEPEL_ ENSG00000122674|ENST00000325974|CCZ1;ENSG00000146574|ENST00000316731|CCZ1B 39.21299971606389 0.0797768173001226 4 [EP]{I|L}[TP]{I|L}EPE{I|L} 10 4 + 80.327 0.0 0.0 7.0674 7.0674 85.644 0.0 0.0 0.0 19.51565403418149 5.897554856604174 5.897554856604174 5.897554856604174 0 1.1382104921644451 1.6989700043360187 0.6549471895720985 0.0 [EP]{I|L}[TP]{I|L}EPE{I|L};[EP]{I|L}[TP]{I|L}EP{I|L}E;[EP]{I|L}[RH]{M(Oxidation (M))|F}PE{I|L};[EP]{I|L}[RH]{M(Oxidation (M))|F}P{I|L}E;{M(Oxidation (M))|F}{I|L}PE[RH]PE{I|L};{[QN]|[E{I|L}]|[KN]}P[TP]{I|L}EPE{I|L};{[QN]|[E{I|L}]|[KN]}P[TP]{I|L}EP{I|L}E;[TP]{I|L}[EP]{I|L}EPE{I|L};{M(Oxidation (M))|F}{I|L}PE[RH]{I|L}[EP];[TP]{I|L}[EP]{I|L}EP{I|L}E 7.0674;6.5485;6.0729;5.554;5.3503;5.2465;4.7276;4.7163;4.3717;4.1974 -;-;-;-;-;-;-;-;-;- 244 1 1.464 80015.7 1.0 6490 4699 11183 HBL1_DMSO_200M_050219_2,11191 HBL1_DMSO_200M_050219_2,11191,FPRHIEPEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11192 60.422 104.0 492570.0 25 0 45564.0 + 34910 SQIGHLQDL 9 97 505.76528240619433 1009.5160118791888 2 505.7653381228447 MULTI CID FTMS 0 0 0 11183 318448.5625 1.0 0 0.0 9 Unmodified _SQIGHLQDL_ ENSG00000092439|ENST00000646667|TRPM7 27.628801355627647 0.1796483985696185 4 VTQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L} 7 7 26.397 0.0 0.0 2.6148 0.0 0.0 0.0 191.0574129693969 191.0574129693969 9.446195195349569 0.0 0.0 0.0 0 0.3182503180159344 0.7958800173440752 0.5 0.0 VTQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L} 2.6148 - 303 + 1 1.464 42061.2 1.0 6491 4699 11183 HBL1_DMSO_200M_050219_2,11192 HBL1_DMSO_200M_050219_2,11192,SQIGHLQDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11193 60.436 800.0 372700.0 25 0 42256.0 + 37598 TLKLREKL 8 200 500.8292857091859 999.6440184851718 2 500.8295165896416 MULTI CID FTMS 0 0 0 11183 276309.53125 1.0 0 0.0 10 Unmodified _TLKLREKL_ ENSG00000188771|ENST00000338832|PLET1 61.357469665136826 0.1155423183535659 4 [{I|L}T]{[NV]|[RG]}V{I|L}TK{I|L} 9 5 + 70.481 0.0 0.0 7.0506 7.0506 85.351 0.0 0.0 0.0 2.156879826251512 41.18925316064672 2.156879826251512 5.69187191097501 0 1.5994850021680094 1.0 1.0269763493273798 0.555462187404089 [{I|L}T]{[NV]|[RG]}V{I|L}TK{I|L};{[QN]|[E{I|L}]|[KN]}[KG]V{I|L}TK{I|L};[K{I|L}]WV{I|L}TK{I|L};{[QN]|[E{I|L}]|[KN]}[RK]{I|L}TK{I|L};{[SA]|[TG]}[R{I|L}]V{I|L}TK{I|L};[KT]{I|L}R{I|L}EK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}V{I|L}TK{I|L};[{I|L}T]KR{I|L}EK{I|L};[K{I|L}]VW{I|L}TK{I|L};{[QN]|[E{I|L}]|[KN]}KK{I|L}EK{I|L} 7.0506;6.4812;6.123;5.8332;5.7411;5.532;5.4836;5.4226;5.3446;3.8497 -;-;-;-;-;-;-;-;-;- 2035 1 1.464 223534.5 0.9800000190734864 6492 4699 11183 HBL1_DMSO_200M_050219_2,11193 HBL1_DMSO_200M_050219_2,11193,TLKLREKL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11194 60.44 225.0 373700.0 25 0 39341.0 30893 RIPLAKMV 8 90 309.8656378102371 926.5750840309112 3 309.8651000857353 MULTI CID FTMS 0 0 0 11183 272195.4375 0.7352637312406644 1 -0.0811729431152343 11 Unmodified _RIPLAKMV_ ENST00000355072.9_1_4:3244305-3244500:+|nuORF 18.13498045792455 0.6430038125133779 4 MV 2 6 20.969 0.0 0.0 2.2631 0.0 0.0 0.0 693.4419538529669 693.4419538529669 -0.4626593516915278 0.0 -0.4626593516915278 0.0 0 0.0 0.0 0.0 0.0 + MV 2.2631 + + 54 + 1 1.464 74560.0 1.0 6493 4699 11183 HBL1_DMSO_200M_050219_2,11194 HBL1_DMSO_200M_050219_2,11194,RIPLAKMV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11195 60.443 192.0 329210.0 25 0 51506.0 + 41047 VMIQHVENL 9 91 541.7875115145516 1081.5604700959032 2 541.7870971560478 MULTI CID FTMS 0 0 0 11183 180247.53125 0.8333148165779332 -1 0.0851936340332031 12 Unmodified _VMIQHVENL_ chr12:25052956-25063720|41|17.37|0.82|4.41|+|ENST00000547044|IRAG2,IRAG2;ENSG00000118308|ENST00000556887|IRAG2;nc|ENSG00000118308|Q12912|IRAG2 53.832793166522166 0.0319663582346103 4 {[ET]|[MV]}{I|L}Q[PS]AHS{I|L} 10 5 + 29.13 0.0 0.0 2.6934 2.6934 63.327 0.0 0.0 0.0 7.269987279362621 1.4612803567823818 1.4612803567823818 1.4612803567823818 0 0.3807196863200844 0.0 0.555462187404089 0.3807196863200844 {[ET]|[MV]}{I|L}Q[PS]AHS{I|L};{[ET]|[MV]}{I|L}Q[PS]AHTV;[HV][Q{I|L}]MVEN{I|L};[HV]AAVMVEN{I|L};[HV][Q{I|L}]MEVN{I|L};[HV][Q{I|L}]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[DP];[HV]AAVMEVN{I|L};{[ET]|[MV]}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VR{[CT]|[{M(Oxidation (M))|F}G]};[HV]AAV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[DP];{[ET]|[MV]}{I|L}[AG][PS]AHS{I|L} 2.6934;2.5582;1.9289;1.8618;1.8557;1.8251;1.7886;1.7609;1.758;1.494 -;-;-;-;-;-;-;-;-;- 280 + 1 1.464 57182.1 1.0 6494 4699 11183 HBL1_DMSO_200M_050219_2,11195 HBL1_DMSO_200M_050219_2,11195,VMIQHVENL True True VMIQHVENL 60.443467 541.787097156048 1706622.0 11183.0 nc|ENSG00000118308|Q12912|IRAG2;;ENSG00000118308|ENST00000556887|IRAG2;;chr12:25052956-25063720|41|17.37|0.82|4.41|+|ENST00000547044|IRAG2,IRAG2 4.86717700958252 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11196 60.457 800.0 351180.0 25 0 17092.0 + 14137 IAYDRYIKEV 10 190 423.8992534911466 1268.67593107364 3 424.2333557009697 MULTI CID FTMS 0 0 0 11183 173824.75 0.6603908236126863 -2 0.180999755859375 13 Unmodified _IAYDRYIKEV_ ENSG00000163950|ENST00000489418|SLBP;nc|ENSG00000163950|Q14493-2|SLBP 37.250883937326 0.1865971120352015 4 {I|L}AV{M(Oxidation (M))|F}K{I|L}YSTEV 11 6 + 73.547 0.0 0.0 5.7972 5.7972 72.149 0.0 0.0 0.0 23.4568378181978 0.5237875363565792 0.5237875363565792 0.5237875363565792 0 0.5629529932484498 1.6989700043360187 1.75 0.0 {I|L}AV{M(Oxidation (M))|F}K{I|L}YSTEV;{I|L}AV{M(Oxidation (M))|F}K{I|L}YSTD{I|L};{I|L}AV{M(Oxidation (M))|F}KY{I|L}STEV;{I|L}AV{M(Oxidation (M))|F}KY{I|L}STD{I|L};{I|L}AV{M(Oxidation (M))|F}YK{I|L}STEV;{I|L}AV{M(Oxidation (M))|F}YK{I|L}STD{I|L};{I|L}AV{M(Oxidation (M))|F}KYVVCEV;{I|L}AV{M(Oxidation (M))|F}KYVVCD{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DRY{I|L}WAV{I|L};{I|L}AV{M(Oxidation (M))|F}YKVVCEV 5.7972;5.7559;5.4211;5.3798;5.1838;5.1425;5.0959;5.0546;5.0507;4.8586 -;-;-;-;-;-;-;-;-;- 7831 + 1 1.464 249902.4 0.6499999761581421 6495 4699 11183 HBL1_DMSO_200M_050219_2,11196 HBL1_DMSO_200M_050219_2,11196,IAYDRYIKEV False True IAYDRYIKEV 60.457282 423.8994 3193475.25 11183.0 ENSG00000163950|ENST00000489418|SLBP;;nc|ENSG00000163950|Q14493-2|SLBP 4.729997714360555 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11197 60.462 196.0 372130.0 25 0 32714.0 + 45079 YPYIGHPQV 9 118 537.2751369979817 1072.5357210627633 2 537.2745239138603 MULTI CID FTMS 0 0 0 11183 146832.46875 0.886025192844085 3 -0.3302459716796875 14 Unmodified _YPYIGHPQV_ nc|ENSG00000168488|Q8WWM7-4|ATXN2L 50.855029805455786 0.0384952370514206 4 YPY{I|L}[C(Carbamidomethyl (C))K]{I|L} 7 5 54.201 0.0 0.0 5.0535 0.0 0.0 0.0 132.04567896060783 132.04567896060783 34.262137858390815 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.5 YPY{I|L}[C(Carbamidomethyl (C))K]{I|L} 5.0535 - 390 + 1 1.464 62998.2 1.0 6496 4699 11183 HBL1_DMSO_200M_050219_2,11197 HBL1_DMSO_200M_050219_2,11197,YPYIGHPQV True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11198 60.476 800.0 354570.0 25 0 83226.0 + 22253 LPRLIIRKV 9 182 554.3897199555654 1106.7648869779307 2 554.3903686404228 MULTI CID FTMS 0 0 0 11183 129335.0390625 0.5450813923625516 -1 0.0851936340332031 15 Unmodified _LPRLIIRKV_ ENSG00000168214|ENST00000355476|RBPJ;ENST00000411556.2_1_9:44472681-44473188:+|nuORF;ENST00000514380.5_1_4:26322378-26431729:+|nuORF;nc|ENSG00000168214|Q06330-2|RBPJ;nc|ENSG00000168214|Q06330-3|RBPJ;nc|ENSG00000168214|Q06330-4|RBPJ;nc|ENSG00000168214|Q06330-5|RBPJ;nc|ENSG00000168214|Q06330-6|RBPJ;nc|ENSG00000168214|Q06330|RBPJ 103.74828524460852 0.0090107942103208 4 {I|L}PR{I|L}{I|L}{I|L}RKV 9 0 + 49.019 0.0 0.0 4.429 4.429 80.129 0.0 0.0 0.0 9.328618725697154 9.328618725697154 9.328618725697154 9.328618725697154 0 1.9419628234359576 0.721246399047171 0.0 1.1109243748081783 + + {I|L}PR{I|L}{I|L}{I|L}RKV;[{I|L}P]R{I|L}{I|L}{I|L}RKV;{I|L}PR{I|L}[RV][K{I|L}]{I|L} 4.429;3.5862;2.2691 +;+;- + 1257 + 1 1.464 217106.7 0.6499999761581421 6497 4699 11183 HBL1_DMSO_200M_050219_2,11198 HBL1_DMSO_200M_050219_2,11198,LPRLIIRKV True True LPRLIIRKV 60.476055 554.390368640423 2886806.75 11183.0 ENST00000411556.2_1_9:44472681-44473188:+|nuORF;;nc|ENSG00000168214|Q06330-2|RBPJ;;nc|ENSG00000168214|Q06330-3|RBPJ;;ENST00000514380.5_1_4:26322378-26431729:+|nuORF;;nc|ENSG00000168214|Q06330-6|RBPJ;;ENSG00000168214|ENST00000355476|RBPJ;;nc|ENSG00000168214|Q06330-4|RBPJ;;nc|ENSG00000168214|Q06330-5|RBPJ;;nc|ENSG00000168214|Q06330|RBPJ 5.201227188110352 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11200 60.481 32.0 1144000.0 25 0 251070.0 + 19344 LENLGQTIV 9 72 493.7794559043902 985.5443588755804 2 493.7796203494072 MULTI CID FTMS 0 0 0 11199 1240724.25 0.3152362901603521 2 -0.2490730285644531 1 Unmodified _LENLGQTIV_ ENSG00000177119|ENST00000320560|ANO6;nc|ENSG00000177119|Q4KMQ2-2|ANO6;nc|ENSG00000177119|Q4KMQ2-3|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6 32.30548876998284 0.1201446275138228 4 TQ{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V 6 7 27.925 0.0 0.0 2.8334 0.0 0.0 248.17462118202417 0.0 248.17462118202417 0.0 19.99282213420201 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.3494850021680094 TQ{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V 2.8334 - 150 + 1 1.464 33565.5 1.0 6498 4700 11199 HBL1_DMSO_200M_050219_2,11200 HBL1_DMSO_200M_050219_2,11200,LENLGQTIV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11201 60.482 55.0 702910.0 25 0 53808.0 + 45198 YQTEIGQTL 9 74 526.7663031035079 1051.5180532738157 2 526.7667724490166 MULTI CID FTMS 0 0 0 11199 843781.0 0.1244307181206202 3 -0.2905960083007812 2 Unmodified _YQTEIGQTL_ ENSG00000160752|ENST00000368356|FDPS;ENST00000453932.1_1_7:76099481-76100288:-|nuORF;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS 32.30548876998284 0.1201446275138228 4 EC(Carbamidomethyl (C))T{I|L} 4 6 32.95 0.0 0.0 3.1336 0.0 0.0 530.305664213072 0.0 530.305664213072 0.0 17.544321917401078 0.0 0.0 0 0.0 0.0 1.2059771852360797 0.0 EC(Carbamidomethyl (C))T{I|L} 3.1336 - 130 + 1 1.464 35146.0 1.0 6499 4700 11199 HBL1_DMSO_200M_050219_2,11201 HBL1_DMSO_200M_050219_2,11201,YQTEIGQTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11202 60.483 37.0 1784600.0 25 0 410250.0 -1 0 73 340.20952759923875 678.4045022652775 2 340.2091552615166 MULTI CID FTMS 0 0 0 11199 1857029.75 0.1487961923848658 -2 0.1663665771484375 3 4 Y 1 -1 3.0989 0.0 0.0 0.4568 0.0 0.0 339.23349504047127 173.08240686588127 512.3159019063526 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.4568 - 2 + 1 1.464 55358.5 1.0 6500 4700 11199 HBL1_DMSO_200M_050219_2,11202 HBL1_DMSO_200M_050219_2,11202, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11203 60.484 37.0 1437600.0 25 0 101800.0 + 22155 LPPSALQSV 9 80 456.26346091798274 910.5123689027656 2 456.2636901736259 MULTI CID FTMS 0 0 0 11199 1350583.375 0.9600995050958818 -1 0.0811729431152343 4 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 46.020951573049366 0.0490941689151868 4 [{I|L}P]{[SA]|[TG]}P{I|L}QSV 9 2 + 41.308 0.0 0.0 4.5368 4.5368 76.1 0.0 0.0 0.0 6.993807418252743 18.44212497064703 6.993807418252743 6.262874945799759 0 1.0994850021680094 1.5228787452803376 0.2742275032520141 0.0 [{I|L}P]{[SA]|[TG]}P{I|L}QSV;[{I|L}P]{[SA]|[TG]}PQ{I|L}SV;[{I|L}P]{[SA]|[TG]}P{I|L}[AG]SV;[{I|L}P]{[SA]|[TG]}P[AG]{I|L}SV;[{I|L}P]{[SA]|[TG]}P[KT][TP];[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[SG][TP];[AG]{I|L}VP{I|L}[SG][TP] 4.5368;3.8489;3.5254;2.8376;1.4071;0.77529;0.72716 -;-;-;-;-;-;- 177 1 1.464 45809.1 1.0 6501 4700 11199 HBL1_DMSO_200M_050219_2,11203 HBL1_DMSO_200M_050219_2,11203,LPPSALQSV True True LPPSALQSV 60.484302 456.263690173626 147660520.0 11199.0 nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;nc|ENSG00000178999|Q96GD4-2|AURKB 4.928393602371216 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11204 60.486 68.0 868150.0 25 0 118000.0 + 41280 VPHPGSITI 9 94 460.76329005459854 919.5120271759972 2 460.7635986208916 MULTI CID FTMS 0 0 0 11199 1014851.375 1.0 0 0.0 5 Unmodified _VPHPGSITI_ ENSG00000132478|ENST00000589666|UNK 81.86404211737425 0.017065112157077 4 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L}T{I|L} 8 6 + 63.396 0.0 0.0 6.8945 6.8945 83.607 0.0 0.0 0.0 13.380952688561967 48.45683781819779 13.380952688561967 4.643783536941726 0 0.9247425010840048 1.5228787452803376 1.555462187404089 0.0 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L}T{I|L};[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}TT{I|L};[VP]H{[SA]|[TG]}PVT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPSV{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{[SA]|[TG]}PVT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[RP]TT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPS{I|L}VT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{[TV]|[{I|L}S]}PVT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPVVTT{I|L};[{I|L}T][NG][KQ]{M(Oxidation (M))|F}{I|L} 6.8945;6.3895;5.3334;5.1216;4.9562;4.245;4.1408;3.8821;3.751;2.6754 -;-;-;-;-;-;-;-;-;- 431 1 1.464 50253.4 1.0 6502 4700 11199 HBL1_DMSO_200M_050219_2,11204 HBL1_DMSO_200M_050219_2,11204,VPHPGSITI True True VPHPGSITI 60.485923 460.763598620892 8469687.0 11199.0 ENSG00000132478|ENST00000589666|UNK 5.458231767018636 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11205 60.488 80.0 990920.0 25 0 117510.0 28650 PVKTEVPL 8 91 441.7683182352048 881.5220835372097 2 441.7682983279228 MULTI CID FTMS 0 0 0 11199 833956.0 0.935722487543028 -4 0.3571548461914062 6 Unmodified _PVKTEVPL_ ENSG00000172403|ENST00000307142|SYNPO2;nc|ENSG00000172403|Q9UMS6-3|SYNPO2;nc|ENSG00000172403|Q9UMS6-4|SYNPO2;nc|ENSG00000172403|Q9UMS6|SYNPO2 28.486842064014134 0.4448922141344407 4 VP 2 6 47.02 0.0 0.0 5.3339 0.0 0.0 0.0 682.3797507008851 682.3797507008851 16.55698178684701 0.0 0.0 0.0 0 0.6050541008457975 2.0 0.0 0.0 + VP 5.3339 + + 268 + 1 1.464 67288.2 1.0 6503 4700 11199 HBL1_DMSO_200M_050219_2,11205 HBL1_DMSO_200M_050219_2,11205,PVKTEVPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11206 60.489 56.0 1207200.0 25 0 260920.0 + 35859 SVLGKVNEI 9 81 479.7822962267369 957.5500395202738 2 479.7821533083916 MULTI CID FTMS 0 0 0 11199 745220.3125 0.2349629542223326 -2 0.1663665771484375 7 Unmodified _SVLGKVNEI_ ENSG00000175203|ENST00000548249|DCTN2;ENST00000550988.5_1_12:57926276-57926769:-|nuORF;nc|ENSG00000175203|Q13561-2|DCTN2;nc|ENSG00000175203|Q13561-3|DCTN2 32.78568957990786 0.1150597335874693 4 [VS]{I|L}{M(Oxidation (M))|F}NV{I|L}GG 9 5 57.691 0.0 0.0 6.0249 0.0 0.0 0.0 68.05128656558827 68.05128656558827 43.22248524140099 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.2887254899964357 [VS]{I|L}{M(Oxidation (M))|F}NV{I|L}GG 6.0249 - 233 + 1 1.464 59957.9 1.0 6504 4700 11199 HBL1_DMSO_200M_050219_2,11206 HBL1_DMSO_200M_050219_2,11206,SVLGKVNEI True True SVLGKVNEI 60.489157 479.782153308392 23725892.0 11199.0 nc|ENSG00000175203|Q13561-3|DCTN2;;nc|ENSG00000175203|Q13561-2|DCTN2;;ENST00000550988.5_1_12:57926276-57926769:-|nuORF;;ENSG00000175203|ENST00000548249|DCTN2 3.363407929738363 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11207 60.491 90.0 661590.0 25 0 112120.0 + 45044 YPYEHSYGL 9 91 564.7534964596243 1127.4924399860486 2 564.7538940310478 MULTI CID FTMS 0 0 0 11199 549617.3125 1.0 0 0.0 8 Unmodified _YPYEHSYGL_ ENSG00000119787|ENST00000378954|ATL2;nc|ENSG00000119787|Q8NHH9-2|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2 77.98433622928108 0.0180125044636492 4 YPYEHSYG{I|L} 9 0 + 70.32 0.0 0.0 6.2369 6.2369 91.686 0.0 0.0 0.0 25.99993446776488 13.46787486224656 13.46787486224656 48.12009138345415 0 1.242992819099939 1.6989700043360187 0.6109243748081782 0.0 + + YPYEHSYG{I|L};{[YC]|[HE]}YK{M(Oxidation (M))|F}Y{[QN]|[E{I|L}]|[KN]} 6.2369;1.969 +;- + 405 + 1 1.464 50072.3 1.0 6505 4700 11199 HBL1_DMSO_200M_050219_2,11207 HBL1_DMSO_200M_050219_2,11207,YPYEHSYGL True True YPYEHSYGL 60.491152 564.753894031048 13305399.0 11199.0 nc|ENSG00000119787|Q8NHH9-2|ATL2;;ENSG00000119787|ENST00000378954|ATL2;;nc|ENSG00000119787|Q8NHH9-5|ATL2;;nc|ENSG00000119787|Q8NHH9-3|ATL2;;nc|ENSG00000119787|Q8NHH9-4|ATL2 8.583933671315512 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11208 60.493 107.0 679090.0 25 0 216830.0 + 44021 YIGGLSTI 8 82 412.2305183968352 822.4464838604704 2 412.2305480837822 MULTI CID FTMS 0 0 0 11199 518203.5 0.901420517028233 5 -0.4944343566894531 9 Unmodified _YIGGLSTI_ REV__ENSG00000140832|ENST00000268485|MARVELD3 0.7936320650641473 0.8195151834710337 4 R 1 -1 0.3786 0.0 0.0 0.046034 0.0 0.0 584.3045598876173 79.01965509586171 663.324214983479 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.046034 - 9 + 1 1.464 64571.4 1.0 6506 4700 11199 HBL1_DMSO_200M_050219_2,11208 HBL1_DMSO_200M_050219_2,11208,YIGGLSTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11209 60.496 146.0 620460.0 25 0 112430.0 -1 0 105 348.7226073029 695.4306616726 2 348.7223388552666 MULTI CID FTMS 0 0 0 11199 456094.4375 0.1504284013011011 -2 0.1663665771484375 10 4 {I|L} 1 -1 8.8735 0.0 0.0 1.276 0.0 0.0 564.3354753706453 0.0 564.3354753706453 0.0 0.9146534179299336 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.276 - 15 + 1 1.464 75855.8 1.0 6507 4700 11199 HBL1_DMSO_200M_050219_2,11209 HBL1_DMSO_200M_050219_2,11209, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11210 60.499 157.0 351460.0 25 0 47632.0 + 16919 KIIYIVHDEV 10 91 614.8506282240672 1227.6867035149344 2 614.8512451052666 MULTI CID FTMS 0 0 0 11199 289201.75 0.0440732907568414 4 -0.3977317810058594 11 Unmodified _KIIYIVHDEV_ ENSG00000100567|ENST00000216455|PSMA3;nc|ENSG00000100567|P25788-2|PSMA3 49.74193281347159 0.0816655385645911 4 K{I|L}{I|L}Y{I|L}V 6 4 59.443 0.0 0.0 4.8418 0.0 0.0 0.0 495.1854698532625 495.1854698532625 26.07773554702089 0.0 0.0 0.0 0 1.524227503252014 0.958607314841775 0.0 0.0 + K{I|L}{I|L}Y{I|L}V 4.8418 + + 551 + 1 1.464 46449.8 1.0 6508 4700 11199 HBL1_DMSO_200M_050219_2,11210 HBL1_DMSO_200M_050219_2,11210,KIIYIVHDEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11211 60.503 185.0 474760.0 25 0 45618.0 + 21764 LPMPKGGR 8 118 428.24815837719166 854.4817638211833 2 428.2431823611259 MULTI CID FTMS 0 0 0 11199 280597.1875 0.4861571177316368 9 -0.9042320251464844 12 Unmodified _LPMPKGGR_ REV__ENSG00000145545|ENST00000274192|SRD5A1 2.577480529830294 0.808687252328423 4 {[DA]|[EG]}{I|L}Q 4 -1 24.882 0.0 0.0 2.912 0.0 0.0 0.0 424.259315679113 424.259315679113 13.913187455970544 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 {[DA]|[EG]}{I|L}Q 2.912 - 144 1 1.464 71932.8 1.0 6509 4700 11199 HBL1_DMSO_200M_050219_2,11211 HBL1_DMSO_200M_050219_2,11211,LPMPKGGR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11212 60.506 153.0 493830.0 25 0 48293.0 + 30189 QVVGDVDTSL 10 136 516.7633335146517 1031.5121140961032 2 516.7645751833916 MULTI CID FTMS 0 0 0 11199 258521.703125 0.5401456024628363 -1 0.0811729431152343 13 Unmodified _QVVGDVDTSL_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 53.832793166522166 0.0576554960245129 4 {[QV]|[N{I|L}]|[RA]|[KV]}V[DG]VD 7 3 46.699 0.0 0.0 4.5272 0.0 0.0 0.0 316.148258465497 316.148258465497 5.094917108873034 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.3494850021680094 0.805462187404089 + {[QV]|[N{I|L}]|[RA]|[KV]}V[DG]VD 4.5272 + + 941 1 1.464 61393.6 1.0 6510 4700 11199 HBL1_DMSO_200M_050219_2,11212 HBL1_DMSO_200M_050219_2,11212,QVVGDVDTSL True True QVVGDVDTSL 60.506052 516.764575183392 2896196.0 11199.0 nc|ENSG00000108883|Q15029-3|EFTUD2;;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 6.25937032699585 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11213 60.511 245.0 388910.0 25 0 26744.0 + + 11262 AVAHEFQEL 9 146 522.2610851915591 1042.507617449918 2 522.2603027224541 MULTI CID FTMS 0 0 0 11199 182045.75 0.9957640239200218 -2 0.1663665771484375 14 Unmodified _GESTFRFSI_ ENSG00000186260|ENST00000571589|MRTFB;nc|ENSG00000186260|Q9ULH7-4|MRTFB;ENST00000572400.5_1_16:14234415-14234826:+|nuORF;ENST00000575833.1_1_16:14234415-14235225:+|nuORF;ENST00000575537.5_1_16:14234415-14243171:+|nuORF 19.256988751693697 0.3154191944385105 4 {[VA]|[{I|L}G]}AHE{M(Oxidation (M))|F}QE{I|L} 9 -1 + 31.881 0.0 0.0 3.0581 3.0581 63.368 0.0 0.0 0.0 1.1350927482751878 12.589283434099606 1.1350927482751878 1.1350927482751878 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}AHE{M(Oxidation (M))|F}QE{I|L};{[QN]|[E{I|L}]|[KN]}A{[HG]|PP}{M(Oxidation (M))|F}QE{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]{M(Oxidation (M))|F}QE{I|L};{[VA]|[{I|L}G]}AHE{M(Oxidation (M))|F}[AG]E{I|L};{[RE]|[WV]}[HV]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E{I|L};{[QN]|[E{I|L}]|[KN]}A[HA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E{I|L};{[QN]|[E{I|L}]|[KN]}A{[HG]|PP}{M(Oxidation (M))|F}[AG]E{I|L};{[QN]|[E{I|L}]|[KN]}[HQ]{M(Oxidation (M))|F}[AG]E{I|L};[AG]{I|L}HE{M(Oxidation (M))|F}QE{I|L};[Q{I|L}]HE{M(Oxidation (M))|F}QE{I|L} 3.0581;2.9492;2.9053;2.1748;2.1419;2.066;2.066;2.0169;1.9078;1.8059 -;-;-;-;-;-;-;-;-;- 639 1 1.464 80643.9 1.0 6511 4700 11199 HBL1_DMSO_200M_050219_2,11213 HBL1_DMSO_200M_050219_2,11213,GESTFRFSI False False AVAHEFQEL 60.510632 522.260302722454 3336528.25 11199.0 ENSG00000186260|ENST00000571589|MRTFB;;nc|ENSG00000186260|Q9ULH7-4|MRTFB;;ENST00000572400.5_1_16:14234415-14234826:+|nuORF;;ENST00000575833.1_1_16:14234415-14235225:+|nuORF;;ENST00000575537.5_1_16:14234415-14243171:+|nuORF 4.114938735961914 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11214 60.514 195.0 324310.0 25 0 24801.0 + + 16559 KCIELDERL 9 98 559.8005781773767 0 559.7975952029228 PEAK CID FTMS 0 0 0 11199 169131.53125 0.5169173584021567 -2 0.1663665771484375 15 Unmodified _KCLVEPSIMV_ ENST00000486032.1_1_17:17150414-17150880:-|nuORF;nc|ENSG00000141030|Q9UNS2-2|COPS3;ENSG00000141030|ENST00000268717|COPS3 13.90604991867851 0.345182617568752 4 C{I|L}E{I|L}D{I|L}MS 8 -1 49.576 0.0 0.0 4.436 0.0 0.0 128.09927186496174 82.0669191949828 210.1661910599445 0.0 0.0 0.0 0.0 0 0.9361818737241736 0.0 0.3494850021680094 0.0 C{I|L}E{I|L}D{I|L}MS 4.436 - 218 + 1 1.464 51510.3 1.0 6512 4700 11199 HBL1_DMSO_200M_050219_2,11214 HBL1_DMSO_200M_050219_2,11214,KCLVEPSIMV False False KCIELDERL 60.514375 559.797595202923 1723879.875 11199.0 ENST00000486032.1_1_17:17150414-17150880:-|nuORF;;nc|ENSG00000141030|Q9UNS2-2|COPS3;;ENSG00000141030|ENST00000268717|COPS3 6.306582132975261 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11215 60.528 800.0 195100.0 25 0 40582.0 + 14029 IAGRAVLI 8 168 406.77119350485646 811.5278340765129 2 406.7711059451103 MULTI CID FTMS 0 0 0 11199 162511.140625 1.0 0 0.0 16 Unmodified _IAGRAVLI_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 38.15118350030904 0.2652218139009398 4 {I|L}A 2 6 34.01 0.0 0.0 4.1908 0.0 0.0 0.0 624.3833944271973 624.3833944271973 10.566265269322573 0.0 0.0 0.0 0 0.3576565225962385 1.3979400086720375 0.0 0.0 + {I|L}A 4.1908 + + 152 + 1 1.464 122688.3 0.6700000166893005 6513 4700 11199 HBL1_DMSO_200M_050219_2,11215 HBL1_DMSO_200M_050219_2,11215,IAGRAVLI False True IAGRAVLI 60.528211 406.77110594511 1080397.5 11199.0 ENSG00000183207|ENST00000595090|RUVBL2;;nc|ENSG00000183207|Q9Y230-2|RUVBL2;;ENST00000594017.5_1_19:49497156-49513425:+|nuORF;;ENST00000596247.5_1_19:49507512-49519096:+|nuORF 0.833926280339559 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11216 60.542 800.0 314030.0 25 0 26352.0 + -1 PDYPCRAMGSI 11 168 633.783662574037 1265.5527722148738 2 633.7853271365166 MULTI CID FTMS 0 0 0 11199 147935.140625 0.1034422950168862 -3 0.2621726989746094 17 Carbamidomethyl (C) _PDYPC(Carbamidomethyl (C))RAMGSI_ REV__ENSG00000167680|ENST00000586582|SEMA6B;REV__nc|ENSG00000167680|Q9H3T3-3|SEMA6B 29.84058131909904 0.3915366693542702 4 DPYGNRD[WM]{I|L} 10 -1 + 104.41 0.0 0.0 8.2503 8.2503 91.607 0.0 0.0 0.0 69.01427107274849 9.05787502935297 9.05787502935297 9.164539485499262 0 2.443672679568534 1.6989700043360187 0.0 1.1382104921644451 DPYGNRD[WM]{I|L};DPYGGGRD[WM]{I|L};DPYGNRP{I|L}[MT]C;DPYGNRP[MT]C{I|L};DPYGGGRP{I|L}[MT]C;DPYGN[VG]D[{I|L}T]C{I|L};DPYGGGRP[MT]C{I|L};DPYGNRP[MT]{I|L}C;[DP]YGN[VG]GYPD{I|L};DPYGN[VG]D[{I|L}T]{I|L}C 8.2503;7.5262;7.4636;7.1103;6.7423;6.6088;6.389;6.0832;5.5913;5.5817 -;-;-;-;-;-;-;-;-;- 4738 + 1 1.464 185749.1 0.8600000143051147 6514 4700 11199 HBL1_DMSO_200M_050219_2,11216 HBL1_DMSO_200M_050219_2,11216,PDYPCRAMGSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11217 60.549 408.0 390510.0 25 0 36022.0 + 37972 TMVDRIEEV 9 142 546.2754492221318 1090.5363455110637 2 546.2740966677666 MULTI CID FTMS 0 0 0 11199 126364.515625 0.418727548739105 -1 0.0811729431152343 18 Unmodified _TMVDRIEEV_ ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A 43.9818466556824 0.0535980856389242 4 MTVDVMTVPV 10 7 + 71.002 0.0 0.0 6.5107 6.5107 76.184 0.0 0.0 0.0 1.2493873660829848 12.997669123219213 1.2493873660829848 1.2493873660829848 0 1.242992819099939 1.6989700043360187 0.7302046884880937 0.0 MTVDVMTVPV;TMVDVMTVPV;MTV[KC]NTVPV;TMV[KC]NTVPV;{[TV]|[{I|L}S]}{I|L}TMVDVDV;[{I|L}T]VTMVDVDV;{I|L}{I|L}STMVDVDV;MTV[{I|L}T][EC]VPV;MTV[KC]GGTVPV;TMV[{I|L}T][EC]VPV 6.5107;6.3961;5.7357;5.6212;5.3483;5.3189;5.0666;4.9826;4.8954;4.868 -;-;-;-;-;-;-;-;-;- 897 + 1 1.464 123808.7 1.0 6515 4700 11199 HBL1_DMSO_200M_050219_2,11217 HBL1_DMSO_200M_050219_2,11217,TMVDRIEEV True True TMVDRIEEV 60.549348 546.274096667767 987574.75 11199.0 ENSG00000073614|ENST00000399788|KDM5A;;nc|ENSG00000073614|P29375-2|KDM5A 6.023477554321289 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11218 60.563 800.0 102070.0 25 0 6244.9 -1 ITYNECMTQV 10 130 637.7735283783861 0 637.7726928591728 PEAK CID FTMS 0 0 0 11199 102259.3203125 0.8181811817352449 -1 0.0811729431152343 19 Carbamidomethyl (C),Oxidation (M) _ITYNEC(Carbamidomethyl (C))M(Oxidation (M))TQV_ ENSG00000172188|ENST00000641580|OR4C11 17.11289562659939 0.3208555510962471 4 TG{M(Oxidation (M))|F}A 4 -1 15.918 0.0 0.0 1.2499 0.0 0.0 263.1411262019845 631.1864107721311 894.3275369741157 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TG{M(Oxidation (M))|F}A 1.2499 - 81 + 1 1.464 65307.8 0.7599999904632568 6516 4700 11199 HBL1_DMSO_200M_050219_2,11218 HBL1_DMSO_200M_050219_2,11218,ITYNECMTQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11219 60.578 800.0 124750.0 25 0 5840.4 + + 13381 DADSASQRLVI 11 152 587.8020496967746 0 587.8077880740166 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _HLISHDKGNGP_ ENSG00000108510|ENST00000397786|MED13 14.40537977576856 0.4095794898365014 4 SD 2 -1 14.728 0.0 0.0 1.255 0.0 0.0 785.4644071554648 183.04165064029533 968.50605779576 0.0 0.0 0.0 0.0 0 1.0994850021680094 0.0 0.0 0.0 SD 1.255 - 226 + 1 1.464 80261.9 0.6700000166893005 6517 4700 11199 HBL1_DMSO_200M_050219_2,11219 HBL1_DMSO_200M_050219_2,11219,HLISHDKGNGP False False DADSASQRLVI 60.578483 587.807788074017 400532.71875 11199.0 ENSG00000108510|ENST00000397786|MED13 3.769204060236613 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11221 60.583 22.0 2673300.0 25 0 191930.0 + 21123 LPAPIEKTI 9 76 491.3025759089447 980.5905988846894 2 491.3026611208916 MULTI CID FTMS 0 0 0 11220 2771050.0 1.0 0 0.0 1 Unmodified _LPAPIEKTI_ nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 82.5293158979368 0.0169039238599547 4 {I|L}PAP{I|L}EKT{I|L} 9 0 + 87.94 0.0 0.0 8.9681 8.9681 98.68 0.0 0.0 0.0 57.64989665415513 16.075543018713816 16.075543018713816 61.22731327798546 0 1.6861818737241734 1.5228787452803376 1.1338031200885157 0.0 + + {I|L}PAP{I|L}EKT{I|L};{I|L}P[VS]{I|L}EK[VP] 8.9681;2.7241 +;- + 364 + 1 1.466 54049.0 1.0 6518 4701 11220 HBL1_DMSO_200M_050219_2,11221 HBL1_DMSO_200M_050219_2,11221,LPAPIEKTI True True LPAPIEKTI 60.582898 491.302661120892 55909660.0 11220.0 nc|ENSG00000211896|P01857|IGHG1;;nc|ENSG00000211893|P01859|IGHG2;;nc|ENSG00000211897|P01860-1|IGHG3;;nc|ENSG00000211893|P01859-1|IGHG2;;nc|ENSG00000211897|P01860|IGHG3;;nc|ENSG00000211896|P01857-1|IGHG1 3.913001219431559 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11222 60.586 130.0 696090.0 25 0 110090.0 + 35309 SSRRPGLP 8 109 435.25113249996593 868.4877120667319 2 435.2514526247978 MULTI CID FTMS 0 0 0 11220 605782.875 0.973228237349573 -6 0.5398025512695312 2 Unmodified _SSRRPGLP_ REV__ENSG00000175137|ENST00000366472|SH3BP5L;REV__ENST00000475978.1_1_1:249106101-249108957:-|nuORF;REV__ENST00000484202.2_1_1:249106101-249107397:-|nuORF;REV__nc|ENSG00000175137|Q7L8J4-2|SH3BP5L 2.302733041254933 0.8103549651115762 4 {I|L} 1 -1 10.713 0.0 0.0 1.2336 0.0 0.0 737.392708870246 0.0 737.392708870246 0.0 1.6225554575675185 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2336 + + 22 + 1 1.466 76908.1 1.0 6519 4701 11220 HBL1_DMSO_200M_050219_2,11222 HBL1_DMSO_200M_050219_2,11222,SSRRPGLP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11223 60.587 36.0 1216100.0 25 0 117370.0 13901 HVVDRVWQ 8 76 519.7765063452861 1037.538459757372 2 519.7772704958916 MULTI CID FTMS 0 0 0 11220 863908.25 0.707259905709131 -2 0.1835403442382812 3 Unmodified _HVVDRVWQ_ ENSG00000108510|ENST00000397786|MED13;ENST00000578132.1_1_17:60106900-60108988:-|nuORF;ENST00000581994.1_1_17:60107174-60107384:-|nuORF 13.90604991867851 0.7054780292895731 4 [{M(Oxidation (M))|F}V][TA]{[{M(Oxidation (M))|F}H]|[RQ]}V{[MS]|[{M(Oxidation (M))|F}A]} 9 6 + 31.768 0.0 0.0 3.0619 3.0619 76.458 0.0 0.0 0.0 10.377885608893994 0.7378621416091882 0.7378621416091882 10.377885608893994 0 0.0 2.0 0.9247425010840048 0.7302046884880937 [{M(Oxidation (M))|F}V][TA]{[{M(Oxidation (M))|F}H]|[RQ]}V{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}{[WT]|[RM]}{[QS]|[NT]}V{[MS]|[{M(Oxidation (M))|F}A]};[HV]V[YK][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F};[HV]V[YK]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V;{[TV]|[{I|L}S]}{[WT]|[RM]}[WK]{[MS]|[{M(Oxidation (M))|F}A]};[PS]WKK[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F};[PS]WKK{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V;[PS][R{M(Oxidation (M))|F}][WK]{[MS]|[{M(Oxidation (M))|F}A]} 3.0619;2.0616;1.3894;1.0992;1.0783;0.75692;0.46678;0.11334 -;-;-;-;-;-;-;- 108 1 1.466 37055.3 1.0 6520 4701 11220 HBL1_DMSO_200M_050219_2,11223 HBL1_DMSO_200M_050219_2,11223,HVVDRVWQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11224 60.588 62.0 1144200.0 25 0 120860.0 + 3021 AVLDGRELRV 10 78 376.5558874485103 1126.6458329457307 3 376.5558349490166 MULTI CID FTMS 0 0 0 11220 600237.0625 0.2295227325131646 -2 0.1835403442382812 4 Unmodified _AVLDGRELRV_ ENSG00000161547|ENST00000359995|SRSF2;nc|ENSG00000161547|Q01130-2|SRSF2 28.49450938151212 0.328477364964909 4 AV{I|L}DVNEV 8 4 76.395 0.0 0.0 6.7807 0.0 0.0 0.0 284.1733797662719 284.1733797662719 66.7098651032213 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.7742275032520141 AV{I|L}DVNEV 6.7807 - 215 + 1 1.466 66704.1 1.0 6521 4701 11220 HBL1_DMSO_200M_050219_2,11224 HBL1_DMSO_200M_050219_2,11224,AVLDGRELRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11225 60.593 232.0 389300.0 25 0 29659.0 + 24239 MAPKAWTV 8 125 452.2412810737047 902.4680092142096 2 452.2417175173759 MULTI CID FTMS 0 0 0 11220 388355.625 0.9265659824613216 -1 0.1023674011230468 5 Unmodified _MAPKAWTV_ ENSG00000138801|ENST00000265174|PAPSS1 24.67388899826682 0.525179942228231 4 {[DS]|[MA]|[CV]|TT}[Q{I|L}]YAPG 8 6 30.411 0.0 0.0 3.3697 0.0 0.0 0.0 68.05137048892811 68.05137048892811 12.407585181787084 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}[Q{I|L}]YAPG 3.3697 - 221 + 1 1.466 75427.1 1.0 6522 4701 11220 HBL1_DMSO_200M_050219_2,11225 HBL1_DMSO_200M_050219_2,11225,MAPKAWTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11226 60.595 89.0 1900200.0 25 0 131090.0 8138 EPLDELYK 8 114 503.7591941582317 1005.5038353832632 2 503.7589294314384 MULTI CID FTMS 0 0 0 11220 326815.0 1.0 0 0.0 6 Unmodified _EPLDELYK_ ENST00000340703.5_1_4:9694764-9704575:+|nuORF 36.04419817259434 0.3004715606373109 4 EPE{I|L}HR 6 4 77.483 0.0 0.0 7.7059 0.0 0.0 0.0 241.0987337701781 241.0987337701781 51.565211345912005 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.7302046884880937 0.6549471895720984 EPE{I|L}HR 7.7059 - 579 + 1 1.466 132581.8 1.0 6523 4701 11220 HBL1_DMSO_200M_050219_2,11226 HBL1_DMSO_200M_050219_2,11226,EPLDELYK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11227 60.608 800.0 350480.0 25 0 36271.0 + 44733 YPITFPRA 8 188 482.7659231735264 963.5172934138528 2 482.7666808962822 MULTI CID FTMS 0 0 0 11220 199432.890625 0.9658267699256506 -1 0.1023674011230468 7 Unmodified _YPITFPRA_ REV__ENSG00000137413|ENST00000372977|TAF8;REV__nc|ENSG00000137413|Q7Z7C8-2|TAF8;REV__nc|ENSG00000137413|Q7Z7C8-4|TAF8 32.30548876998284 0.3644845974844379 4 YP{I|L}AWTT{I|L} 8 -1 + 52.194 0.0 0.0 5.417 5.417 73.865 0.0 0.0 0.0 21.84736556034129 0.2339159963081698 0.2339159963081698 2.2825985004339984 0 0.5796896906561032 2.0 0.4035984316004219 0.0 YP{I|L}AWTT{I|L};YPPG[YR]V{I|L};YP{I|L}Q[MT]V{I|L};YPPG[YR]{I|L}V;YP{I|L}Q[MT]{I|L}V;YP{I|L}AG[MT]V{I|L};YP{I|L}AG[MT]{I|L}V;Y{I|L}PAWTT{I|L};{[TV]|[{I|L}S]}[YR]A{I|L}QN;NPAK[HS]PT{I|L} 5.417;5.1801;5.0789;4.9974;4.8961;4.5571;4.3743;2.5881;2.2426;2.1903 -;-;-;-;-;-;-;-;-;- 1610 + 1 1.466 210589.5 0.9399999976158142 6524 4701 11220 HBL1_DMSO_200M_050219_2,11227 HBL1_DMSO_200M_050219_2,11227,YPITFPRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11228 60.622 800.0 190510.0 25 0 20266.0 + -1 NALNEEMEST 10 180 577.2379439403985 1152.461334947597 2 577.2381469607353 MULTI CID FTMS 0 0 0 11220 157713.03125 1.0 0 0.0 8 Oxidation (M) _NALNEEM(Oxidation (M))EST_ REV__ENSG00000063660|ENST00000264039|GPC1;REV__ENST00000469694.5_1_2:241381745-241403123:+|nuORF 20.41453444215458 0.5050059513928961 4 {[QG]|[NA]}{I|L}ETMP 7 -1 42.028 0.0 0.0 3.6468 0.0 0.0 0.0 393.0913790338501 393.0913790338501 22.31759104860829 0.0 0.0 0.0 0 0.7396518287104438 2.0 0.5 0.0 {[QG]|[NA]}{I|L}ETMP 3.6468 - 311 + 1 1.466 118159.1 0.959999978542328 6525 4701 11220 HBL1_DMSO_200M_050219_2,11228 HBL1_DMSO_200M_050219_2,11228,NALNEEMEST False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11229 60.636 800.0 228840.0 25 0 21324.0 37614 TLLDLRCQTH 10 196 400.543250700676 0 400.5431091189384 PEAK CID FTMS 0 0 0 11220 159367.34375 1.0 0 0.0 9 Unmodified _TLLDLRCQTH_ ENSG00000174514|ENST00000367147|MFSD4A;nc|ENSG00000174514|Q8N468-2|MFSD4A 18.721224879955976 0.3085704076828365 4 NKD 3 9 9.6927 0.0 0.0 1.213 0.0 0.0 59.76660286443957 379.1396883600219 438.9062912244615 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NKD 1.213 - 75 + 1 1.466 139060.6 0.7200000286102295 6526 4701 11220 HBL1_DMSO_200M_050219_2,11229 HBL1_DMSO_200M_050219_2,11229,TLLDLRCQTH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11230 60.65 800.0 191070.0 25 0 11052.0 + 9221 FGIDRDAIAQA 11 167 588.8038337769071 1175.5931146206142 2 588.8024780154228 MULTI CID FTMS 0 0 0 11220 113819.8828125 0.309567554019094 -1 0.1023674011230468 10 Unmodified _FGIDRDAIAQA_ ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53259774-53260053:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;nc|ENSG00000163931|P29401-2|TKT 40.72490554402381 0.2012291192650359 4 {M(Oxidation (M))|F}[RV]WW{I|L}AQA 9 5 + 41.506 0.0 0.0 3.5306 3.5306 66.417 0.0 0.0 0.0 8.696662315049934 2.041199826559243 2.041199826559243 2.041199826559243 0 1.8182503180159344 0.0 0.0 1.274227503252014 {M(Oxidation (M))|F}[RV]WW{I|L}AQA;{M(Oxidation (M))|F}[RV]WW{I|L}AAQ;[AG]A{[QD]|[EN]|[WG]|[KD]|[RS]}[KG]{M(Oxidation (M))|F}{I|L}AQA;{[QN]|[E{I|L}]|[KN]}PC[KG]{M(Oxidation (M))|F}{I|L}AQA;[QA]{[QD]|[EN]|[WG]|[KD]|[RS]}[KG]{M(Oxidation (M))|F}{I|L}AQA;{[CP]|[EA]}{[QN]|[E{I|L}]|[KN]}[KG]{M(Oxidation (M))|F}{I|L}AQA;[HV]Q[HS]W{I|L}AQA;[HV]Q[HS]W{I|L}AAQ;{[QN]|[E{I|L}]|[KN]}P[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}{I|L}AQA;{[CT]|[{M(Oxidation (M))|F}G]}HT[KG]{M(Oxidation (M))|F}{I|L}AQA 3.5306;3.357;2.5834;2.4625;2.4523;2.4186;2.3438;2.1701;2.1592;2.1337 -;-;-;-;-;-;-;-;-;- 2941 + 1 1.466 113344.2 0.8399999737739563 6527 4701 11220 HBL1_DMSO_200M_050219_2,11230 HBL1_DMSO_200M_050219_2,11230,FGIDRDAIAQA False True FGIDRDAIAQA 60.649843 588.802478015423 2601333.25 11220.0 ENST00000461139.5_1_3:53259774-53265639:-|nuORF;;ENST00000460343.5_1_3:53259774-53260053:-|nuORF;;ENSG00000163931|ENST00000462138|TKT;;nc|ENSG00000163931|P29401-2|TKT 5.856395244598389 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11231 60.664 800.0 161620.0 25 0 14476.0 + 43720 YDAREIVNNV 10 153 596.8015162784674 1191.5884796237349 2 596.8007690310478 MULTI CID FTMS 0 0 0 11220 110089.09375 0.6792806493526652 -6 0.5398025512695312 11 Unmodified _YDAREIVNNV_ ENSG00000077097|ENST00000264331|TOP2B;nc|ENSG00000077097|Q02880-2|TOP2B 53.31671820480216 0.0606844387689228 4 {[YD]|[{M(Oxidation (M))|F}M]}{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}VNNV 10 0 + 59.363 0.0 0.0 4.9818 4.9818 74.051 0.0 0.0 0.0 3.321876816314429 14.146518864155126 3.321876816314429 3.321876816314429 0 1.548455006504028 1.154901959985743 0.0 0.4247425010840047 + + {[YD]|[{M(Oxidation (M))|F}M]}{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}VNNV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}VNDYNV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}VDYNNV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}VDNYNV;{NN|[MP]|[D{I|L}]|[EV]}K{[YD]|[{M(Oxidation (M))|F}M]}{I|L}VNNV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[YD]|[{M(Oxidation (M))|F}M]}VNNV;{[YD]|[{M(Oxidation (M))|F}M]}{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}VGGNV;{[YD]|[{M(Oxidation (M))|F}M]}{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}VNGGV;{NN|[MP]|[D{I|L}]|[EV]}V[K{I|L}]NDYNV;{NN|[MP]|[D{I|L}]|[EV]}V[K{I|L}]DYNNV 4.9818;4.7031;4.6577;4.5982;4.3472;4.2424;4.2127;4.2127;4.2091;4.1637 +;-;-;-;-;-;-;-;-;- + 3051 1 1.466 101153.1 0.8299999833106995 6528 4701 11220 HBL1_DMSO_200M_050219_2,11231 HBL1_DMSO_200M_050219_2,11231,YDAREIVNNV True True YDAREIVNNV 60.663677 596.800769031048 1237180.875 11220.0 nc|ENSG00000077097|Q02880-2|TOP2B;;ENSG00000077097|ENST00000264331|TOP2B 6.691404819488525 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11232 60.679 800.0 72611.0 25 0 7287.8 10834 GAAGSGKK 8 105 675.3802358380418 674.3729593714418 1 675.3820678591728 MULTI CID FTMS 0 0 0 11220 108542.6171875 0.6886099525339104 1 -0.1467056274414062 12 Unmodified _GAAGSGKK_ ENSG00000125798|ENST00000419308|FOXA2;nc|ENSG00000125798|Q9Y261|FOXA2 0.7936320650641473 0.8195151834710337 4 {I|L} 1 8 9.6777 0.0 0.0 1.4351 0.0 0.0 543.2782613507371 0.0 543.2782613507371 0.0 0.6433330456377195 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4351 - 45 + 1 1.466 51771.4 0.8199999928474426 6529 4701 11220 HBL1_DMSO_200M_050219_2,11232 HBL1_DMSO_200M_050219_2,11232,GAAGSGKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11233 60.683 187.0 389310.0 25 0 48773.0 + 37512 TLGRMLPPI 9 118 499.2968462476724 996.5791395621447 2 499.8004333376884 MULTI CID FTMS 0 0 0 11220 116879.625 0.9339463258063944 -2 0.1835403442382812 13 Unmodified _TLGRMLPPI_ REV__ENSG00000145348|ENST00000394708|TBCK;REV__ENST00000510927.5_1_4:106967729-107168455:-|nuORF;REV__nc|ENSG00000145348|Q8TEA7-2|TBCK;REV__nc|ENSG00000145348|Q8TEA7-3|TBCK 13.50788311687929 0.4710407108020397 4 [VP]V{[CT]|[{M(Oxidation (M))|F}G]}[KG]V 8 -1 17.707 0.0 0.0 1.7768 0.0 0.0 0.0 210.1085944784136 210.1085944784136 -5.60347683306933 0.0 -5.60347683306933 0.0 0 0.0 0.6575773191777937 0.3054621874040891 0.3807196863200844 [VP]V{[CT]|[{M(Oxidation (M))|F}G]}[KG]V 1.7768 - 825 1 1.466 61255.8 1.0 6530 4701 11220 HBL1_DMSO_200M_050219_2,11233 HBL1_DMSO_200M_050219_2,11233,TLGRMLPPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11234 60.696 800.0 165040.0 25 0 9259.6 + 12035 RQMAEIAVNAV 11 169 601.3188432902774 0 601.3206054568291 PEAK CID FTMS 0 0 0 11220 113974.9765625 1.0 0 0.0 14 Unmodified _GQCRAARRQGV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF 17.11289562659939 0.3845757490720307 4 ANVAQ[YV]PA 9 10 31.833 0.0 0.0 2.6514 0.0 0.0 117.07201750237604 167.0832460992797 284.15526360165575 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 ANVAQ[YV]PA 2.6514 - 1579 + 1 1.466 96614.0 0.8399999737739563 6531 4701 11220 HBL1_DMSO_200M_050219_2,11234 HBL1_DMSO_200M_050219_2,11234,GQCRAARRQGV False False RQMAEIAVNAV 60.696441 601.320605456829 437079.1875 11220.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5;;ENST00000423695.6_1_5:10250480-10261980:+|nuORF 5.616494814554851 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11235 60.711 800.0 140010.0 25 0 12303.0 6405 DYMCTECGYV 10 165 592.2085016789033 1182.4024504246065 2 592.2087280154228 MULTI CID FTMS 0 0 0 11220 98335.953125 0.8586910131829208 -1 0.1023674011230468 15 Unmodified _DYMCTECGYV_ ENSG00000115568|ENST00000411696|ZNF142;ENST00000433921.5_1_2:219503064-219516433:-|nuORF;nc|ENSG00000115568|P52746|ZNF142 3.944395688203298 0.708391353636983 4 QSW{M(Oxidation (M))|F}[YV] 6 8 24.116 0.0 0.0 2.0396 0.0 0.0 354.06306655097814 0.0 354.06306655097814 0.0 11.641974908773918 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 QSW{M(Oxidation (M))|F}[YV] 2.0396 - 217 1 1.466 90041.6 0.8399999737739563 6532 4701 11220 HBL1_DMSO_200M_050219_2,11235 HBL1_DMSO_200M_050219_2,11235,DYMCTECGYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11236 60.725 800.0 147810.0 25 0 15835.0 + 9090 FFHIRQWFSCL 11 105 742.3675450207343 1482.7205371082684 2 742.3680297732353 MULTI CID FTMS 0 0 0 11220 97954.984375 0.7710970655510468 -1 0.1023674011230468 16 Unmodified _FFHIRQWFSCL_ REV__ENSG00000167769|ENST00000301452|ACER1 2.9952420565917617 0.861016188266951 4 {[QG]|[NA]}WPQDAEAVQ[RV] 13 -1 + 69.188 0.0 0.0 4.6663 4.6663 73.365 0.0 0.0 0.0 45.65862311909154 4.018730716276991 4.018730716276991 3.631779024128264 0 0.9247425010840048 0.5228787452803376 0.0 0.4247425010840047 {[QG]|[NA]}WPQDAEAVQ[RV];{[QG]|[NA]}WPQWEAVQ[RV];{[QG]|[NA]}WP[AG]DAEAVQ[RV];{[QG]|[NA]}WPQDAEAV[AG][RV];{[QG]|[NA]}{[DA]|[EG]}PQDAEAVQ[RV];{[QG]|[NA]}WPQWEAV[AG][RV];{[QG]|[NA]}{[DA]|[EG]}PQWEAVQ[RV];{[QG]|[NA]}WP[AG]WEAVQ[RV];{[QG]|[NA]}WPQD[RD]VQ[RV];{[QG]|[NA]}WP[AG]DAEAV[AG][RV] 4.6663;4.4214;4.0544;4.0544;4.0544;3.8077;3.8077;3.8077;3.4785;3.444 -;-;-;-;-;-;-;-;-;- 738 + 1 1.466 85210.2 0.7699999809265137 6533 4701 11220 HBL1_DMSO_200M_050219_2,11236 HBL1_DMSO_200M_050219_2,11236,FFHIRQWFSCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11238 60.73 3.7 12685000.0 25 0 1416800.0 + 11147 GEIVTVNKL 9 80 486.7897930947789 971.565033256358 2 486.7902404665947 MULTI CID FTMS 0 0 0 11237 6204109.5 0.4166267048303602 1 -0.0415229797363281 1 Unmodified _GEIVTVNKL_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 19.256988751693697 0.3154191944385105 4 {[DA]|[EG]}{I|L} 3 -1 20.999 0.0 0.0 2.1613 0.0 0.0 0.0 669.3938656140328 669.3938656140328 4.927285388497218 0.0 0.0 0.0 0 0.3807196863200844 1.3010299956639813 0.0 0.0 {[DA]|[EG]}{I|L} 2.1613 + + 143 1 1.466 41067.7 1.0 6534 4702 11237 HBL1_DMSO_200M_050219_2,11238 HBL1_DMSO_200M_050219_2,11238,GEIVTVNKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11239 60.731 9.9 5489100.0 25 0 586860.0 + 10063 FPRHIEPEL 9 77 569.3061529013178 1136.5977528694357 2 569.3067504763603 MULTI CID FTMS 0 0 0 11237 4928375.5 0.8580399424767051 1 -0.0415229797363281 2 Unmodified _FPRHIEPEL_ ENSG00000122674|ENST00000325974|CCZ1;ENSG00000146574|ENST00000316731|CCZ1B 42.312485326615175 0.0627620958981271 4 [EP]{I|L}[TP]{I|L}EPE{I|L} 10 4 + 74.927 0.0 0.0 6.5922 6.5922 91.11 0.0 0.0 0.0 17.174165578762484 16.53212513775344 16.53212513775344 17.174165578762484 0 1.1549471895720984 1.5228787452803376 0.2742275032520141 0.0 [EP]{I|L}[TP]{I|L}EPE{I|L};{[QN]|[E{I|L}]|[KN]}P[TP]{I|L}EPE{I|L};[TP]{I|L}[EP]{I|L}EPE{I|L};[EP]{I|L}[Y{I|L}]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[QN]|[E{I|L}]|[KN]}P[Y{I|L}]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 6.5922;5.0812;4.3264;2.9083;1.0623 -;-;-;-;- 130 1 1.466 46956.2 1.0 6535 4702 11237 HBL1_DMSO_200M_050219_2,11239 HBL1_DMSO_200M_050219_2,11239,FPRHIEPEL True True FPRHIEPEL 60.730782 569.30675047636 232163168.0 11237.0 ENSG00000146574|ENST00000316731|CCZ1B;;ENSG00000122674|ENST00000325974|CCZ1 3.828348477681478 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11240 60.732 3.5 14361000.0 25 0 1818300.0 + 2312 AQIGSYVHV 9 78 487.2586759788175 972.502799024435 2 487.2591430544853 MULTI CID FTMS 0 0 0 11237 11092480.0 0.573090405594261 -2 0.2490730285644531 3 Unmodified _AQIGSYVHV_ ENSG00000166847|ENST00000300087|DCTN5;ENST00000566053.5_1_16:23652819-23678462:+|nuORF;nc|ENSG00000166847|Q9BTE1-2|DCTN5 50.855029805455786 0.0384952370514206 4 [QA]{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}A 9 5 + 36.242 0.0 0.0 3.7266 3.7266 66.403 0.0 0.0 0.0 1.933153492440248 18.33677894057505 1.933153492440248 1.7609125905568137 0 1.0 0.8860566476931632 0.0 0.4247425010840047 [QA]{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}A;[QA]{I|L}{[QC]|[C(Carbamidomethyl (C))A]}V[Q{I|L}]A;{[DA]|[EG]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}A;[HV]Y[SG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}A;[HV]Y[SG]V[Q{I|L}]A 3.7266;3.5456;2.5255;2.0349;1.8538 -;-;-;-;- 148 1 1.466 42900.7 1.0 6536 4702 11237 HBL1_DMSO_200M_050219_2,11240 HBL1_DMSO_200M_050219_2,11240,AQIGSYVHV True True AQIGSYVHV 60.731961 487.259143054485 413425440.0 11237.0 nc|ENSG00000166847|Q9BTE1-2|DCTN5;;ENSG00000166847|ENST00000300087|DCTN5;;ENST00000566053.5_1_16:23652819-23678462:+|nuORF 8.315608978271484 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11241 60.733 7.9 5743300.0 25 0 1049800.0 + 26499 NVAWMVWD 8 80 510.735203921396 1019.455854909592 2 510.7355529665947 MULTI CID FTMS 0 0 0 11237 6380362.5 0.6573325764479169 -2 0.2490730285644531 4 Unmodified _NVAWMVWD_ REV__ENSG00000134954|ENST00000392668|ETS1;REV__nc|ENSG00000134954|P14921-2|ETS1;REV__nc|ENSG00000134954|P14921-5|ETS1;REV__nc|ENSG00000134954|P14921|ETS1 13.50788311687929 0.7113601687236069 4 [DP]S{M(Oxidation (M))|F}NE 6 -1 30.367 0.0 0.0 2.9787 0.0 0.0 0.0 327.1680306598217 327.1680306598217 14.882287586051106 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.9247425010840048 [DP]S{M(Oxidation (M))|F}NE 2.9787 - 75 1 1.466 40992.1 1.0 6537 4702 11237 HBL1_DMSO_200M_050219_2,11241 HBL1_DMSO_200M_050219_2,11241,NVAWMVWD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11242 60.734 11.0 5585200.0 25 0 869820.0 + 27015 PELRQHASSI 10 78 379.8732872133636 1136.5980322402909 3 379.8730651736259 MULTI CID FTMS 0 0 0 11237 4406579.0 0.7696441981107072 1 -0.0415229797363281 5 Unmodified _PELRQHASSI_ REV__ENSG00000121542|ENST00000492595|SEC22A 13.90604991867851 0.6142120002215601 4 [EP]{I|L}[TP]{I|L}EPE{I|L} 10 -1 + 64.43 0.0 0.0 5.6687 5.6687 82.598 0.0 0.0 0.0 20.541134294324124 35.42841813161999 20.541134294324124 8.293037728310253 0 0.4247425010840047 1.6989700043360187 0.3807196863200844 0.0 [EP]{I|L}[TP]{I|L}EPE{I|L};[EP]{I|L}[RH]{M(Oxidation (M))|F}PE{I|L};{[QN]|[E{I|L}]|[KN]}P[TP]{I|L}EPE{I|L};{[QN]|[E{I|L}]|[KN]}P[RH]{M(Oxidation (M))|F}PE{I|L};[EP]{I|L}{[VA]|[{I|L}G]}{I|L}[HA][C(Carbamidomethyl (C))K] 5.6687;4.939;3.0443;2.3147;1.9955 -;-;-;-;- 135 1 1.466 58225.0 1.0 6538 4702 11237 HBL1_DMSO_200M_050219_2,11242 HBL1_DMSO_200M_050219_2,11242,PELRQHASSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11243 60.735 31.0 997480.0 25 0 70705.0 + 41904 VQEQNFPTV 9 66 531.2666391482201 1060.51872536324 2 531.2668334841728 MULTI CID FTMS 0 0 0 11237 1694998.875 1.0 0 0.0 6 Unmodified _VQEQNFPTV_ ENST00000352527.5_1_1:6086454-6100615:+|nuORF 47.74868867922204 0.0453060283459952 4 {M(Oxidation (M))|F}PTV 4 5 36.943 0.0 0.0 3.4835 0.0 0.0 598.2687081286682 0.0 598.2687081286682 0.0 9.197150495474986 0.0 0.0 0 1.0 0.0 0.7302046884880937 0.0 + {M(Oxidation (M))|F}PTV 3.4835 + + 105 + 1 1.466 34303.6 1.0 6539 4702 11237 HBL1_DMSO_200M_050219_2,11243 HBL1_DMSO_200M_050219_2,11243,VQEQNFPTV True True VQEQNFPTV 60.735497 531.266833484173 13200755.0 11237.0 ENST00000352527.5_1_1:6086454-6100615:+|nuORF 5.896861871083577 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11244 60.737 24.0 1968600.0 25 0 249540.0 + 27964 PLVRQTSI 8 85 457.2774315756136 912.5403102180272 2 457.2781555056572 MULTI CID FTMS 0 0 0 11237 1452545.75 0.8993730746708453 -2 0.2490730285644531 7 Unmodified _PLVRQTSI_ REV__ENSG00000075275|ENST00000674500|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6-2|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6|CELSR1 44.40701690623563 0.1655546087385432 4 TS{I|L} 3 -1 43.94 0.0 0.0 4.8151 0.0 0.0 593.3661976544937 0.0 593.3661976544937 0.0 21.544387449636204 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 TS{I|L} 4.8151 + + 168 1 1.466 40908.9 1.0 6540 4702 11237 HBL1_DMSO_200M_050219_2,11244 HBL1_DMSO_200M_050219_2,11244,PLVRQTSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11245 60.738 38.0 2411100.0 25 0 495770.0 + 24780 MPHSIMRI 8 94 328.8421114202371 983.5045048609112 3 328.8419067263603 MULTI CID FTMS 0 0 0 11237 1290998.75 0.5014579583805029 1 -0.0415229797363281 8 Unmodified _MPHSIMRI_ ENSG00000138107|ENST00000369905|ACTR1A;ENST00000480947.1_1_10:104243895-104247966:-|nuORF 26.268140514670165 0.4916104673212489 4 MPH{I|L}S{I|L}MR 8 2 + 63.659 0.0 0.0 6.4727 6.4727 79.459 0.0 0.0 0.0 53.06300428119853 9.374819553214984 9.374819553214984 3.0102999566398125 0 0.0 0.0 1.2302046884880935 0.4247425010840047 MPH{I|L}S{I|L}MR;MPHS{I|L}{I|L}MR;MP{I|L}HS{I|L}MR;M{I|L}PHS{I|L}MR;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}S{I|L}{M(Oxidation (M))|F}{[CP]|[EA]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{I|L}S{M(Oxidation (M))|F}{[CP]|[EA]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}[YR]PM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}{I|L}[R{M(Oxidation (M))|F}]M;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[YR]{I|L}PM;[{M(Oxidation (M))|F}V][YR]{I|L}MR 6.4727;6.1666;6.1348;5.4215;3.1439;2.8378;1.9711;1.9711;1.3589;1.0632 -;-;-;-;-;-;-;-;-;- 217 + 1 1.466 79441.8 1.0 6541 4702 11237 HBL1_DMSO_200M_050219_2,11245 HBL1_DMSO_200M_050219_2,11245,MPHSIMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11246 60.739 56.0 1511700.0 25 0 287750.0 + 10087 FPSEIVGKRI 10 88 382.5607490996201 1144.6604178990603 3 382.5604431033134 MULTI CID FTMS 0 0 0 11237 1089437.875 0.3032242269237414 1 -0.0415229797363281 9 Unmodified _FPSEIVGKRI_ ENSG00000171863|ENST00000645674|RPS7;ENST00000415804.2_1_4:4509290-4509386:+|nuORF;ENST00000426405.1_1_X:73629614-73629932:+|nuORF;ENST00000463499.1_1_4:42474097-42474295:+|nuORF;ENST00000484240.1_1_17:44798950-44799232:-|nuORF 35.079672537005266 0.2095246155385646 4 {I|L}V{I|L}ESPE 7 9 56.274 0.0 0.0 4.9162 0.0 0.0 359.22850234199376 0.0 359.22850234199376 0.0 24.005922950290355 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 {I|L}V{I|L}ESPE 4.9162 - 181 1 1.466 77890.6 1.0 6542 4702 11237 HBL1_DMSO_200M_050219_2,11246 HBL1_DMSO_200M_050219_2,11246,FPSEIVGKRI False True FPSEIVGKRI 60.739274 382.560443103313 49169360.0 11237.0 ENST00000415804.2_1_4:4509290-4509386:+|nuORF;;ENST00000484240.1_1_17:44798950-44799232:-|nuORF;;ENST00000463499.1_1_4:42474097-42474295:+|nuORF;;ENSG00000171863|ENST00000645674|RPS7;;ENST00000426405.1_1_X:73629614-73629932:+|nuORF 4.738230069478353 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11247 60.741 54.0 839500.0 25 0 161740.0 + 12735 GVMSVMPLVSA 11 69 545.7852271992537 1089.5559014653072 2 545.7853271365166 MULTI CID FTMS 0 0 0 11237 1031841.1875 0.1373281370633953 -3 0.3302459716796875 10 Unmodified _GVMSVMPLVSA_ REV__ENSG00000158806|ENST00000518119|NPM2;REV__nc|ENSG00000158806|Q86SE8-2|NPM2 49.93300154707207 0.1180010809391383 4 {NN|[MP]|[D{I|L}]|[EV]}DE[KT]{I|L}VSA 10 -1 + 46.118 0.0 0.0 4.2328 4.2328 82.87 0.0 0.0 0.0 3.379231027444405 31.42544976785331 3.379231027444405 28.94856574903606 0 1.0440228147639203 0.0 1.2302046884880935 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}DE[KT]{I|L}VSA;[RH]{I|L}[KT]{[YD]|[{M(Oxidation (M))|F}M]}SA;{NN|[MP]|[D{I|L}]|[EV]}DEV[KP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[RH]{I|L}[KT]{[{M(Oxidation (M))|F}C]|[YS]}W 4.2328;1.5758;0.88264;0.26188 -;-;-;- 78 1 1.466 40994.8 1.0 6543 4702 11237 HBL1_DMSO_200M_050219_2,11247 HBL1_DMSO_200M_050219_2,11247,GVMSVMPLVSA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11248 60.742 50.0 1524100.0 25 0 265910.0 + 39410 VALDRLDRIG 10 77 564.3296877241969 1126.6448225151937 2 564.3299438357353 MULTI CID FTMS 0 0 0 11237 988052.25 1.0 0 0.0 11 Unmodified _VALDRLDRIG_ ENSG00000138622|ENST00000261917|HCN4 22.736283301280096 0.4578556481593033 4 V[W{I|L}][WR]V 6 7 19.226 0.0 0.0 1.7064 0.0 0.0 0.0 284.1737154596313 284.1737154596313 3.740984232451016 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 V[W{I|L}][WR]V 1.7064 - 68 + 1 1.466 64305.5 1.0 6544 4702 11237 HBL1_DMSO_200M_050219_2,11248 HBL1_DMSO_200M_050219_2,11248,VALDRLDRIG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11249 60.744 75.0 921840.0 25 0 222140.0 27784 PLPPPPPLA 9 68 449.7732923312103 897.5320317292206 2 449.7733337283134 MULTI CID FTMS 0 0 0 11237 835230.5 1.0 0 0.0 12 Unmodified _PLPPPPPLA_ ENSG00000176182|ENST00000322217|MYPOP;REV__ENSG00000110721|ENST00000265689|CHKA;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__nc|ENSG00000110721|P35790-2|CHKA;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3 56.04830969593885 0.0282699710924866 4 [{I|L}P]PPPP 6 3 53.901 0.0 0.0 6.0055 0.0 0.0 0.0 296.1615874725989 296.1615874725989 39.92152505736741 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + [{I|L}P]PPPP 6.0055 + + 123 1 1.466 56605.5 1.0 6545 4702 11237 HBL1_DMSO_200M_050219_2,11249 HBL1_DMSO_200M_050219_2,11249,PLPPPPPLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11250 60.746 118.0 620390.0 25 0 188610.0 -1 0 76 466.2659961766482 465.2587197100482 1 466.2651550173759 MULTI CID FTMS 0 0 0 11237 566621.375 0.0460496128069333 5 -0.4430580139160156 13 4 R 1 -1 18.411 0.0 0.0 3.9572 0.0 0.0 291.14656563465604 0.0 291.14656563465604 0.0 3.8023606137578447 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 R 3.9572 - 23 + 1 1.466 59430.1 1.0 6546 4702 11237 HBL1_DMSO_200M_050219_2,11250 HBL1_DMSO_200M_050219_2,11250, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11251 60.748 79.0 619060.0 25 0 74056.0 -1 YPDKYCPL 8 81 528.2482251781995 1054.481897423199 2 528.2490722537041 MULTI CID FTMS 0 0 0 11237 536239.8125 0.954400693944802 -1 0.1467056274414062 14 Carbamidomethyl (C) _YPDKYC(Carbamidomethyl (C))PL_ ENSG00000160445|ENST00000291900|ZER1 20.871210003555333 0.6025813472596342 4 [DP]Y 3 -1 35.502 0.0 0.0 3.3668 0.0 0.0 0.0 676.3164156549436 676.3164156549436 2.990502663004264 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 [DP]Y 3.3668 - 108 + 1 1.466 47587.3 1.0 6547 4702 11237 HBL1_DMSO_200M_050219_2,11251 HBL1_DMSO_200M_050219_2,11251,YPDKYCPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11252 60.751 155.0 348780.0 25 0 81578.0 -1 EGCHCDAGYV 10 89 584.2111179237847 1166.4076829143694 2 584.2116577029228 MULTI CID FTMS 0 0 0 11237 528606.5 0.3325997374029634 2 -0.1486587524414062 15 2 Carbamidomethyl (C) _EGC(Carbamidomethyl (C))HC(Carbamidomethyl (C))DAGYV_ ENSG00000109927|ENST00000392793|TECTA 7.289230182591677 0.6929195370588109 4 SADMYV 6 -1 42.568 0.0 0.0 3.6495 0.0 0.0 482.1287403791032 0.0 482.1287403791032 0.0 17.16190326687972 0.0 0.0 0 1.1435078169319297 0.0 1.174742501084005 0.0 SADMYV 3.6495 - 105 1 1.466 50101.8 1.0 6548 4702 11237 HBL1_DMSO_200M_050219_2,11252 HBL1_DMSO_200M_050219_2,11252,EGCHCDAGYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11253 60.754 119.0 431760.0 25 0 39792.0 + 22123 LPPPVQTQI 9 85 496.7926827535134 991.5708125738269 2 496.7921935915947 MULTI CID FTMS 0 0 0 11237 452127.09375 0.1132403196411591 20 -1.9016799926757808 16 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 34.10243960390752 0.1078313939113124 4 [{I|L}P]PPVQ[QT]{I|L} 9 0 + 54.142 0.0 0.0 5.4602 5.4602 74.519 0.0 0.0 0.0 21.232492903979 13.780673999630864 13.780673999630864 2.552725051033065 0 0.9247425010840048 2.0 0.0 0.0 + + [{I|L}P]PPVQ[QT]{I|L};[{I|L}P]PNP{I|L}[QT]{I|L};[{I|L}P]PPN{I|L}[QT]{I|L};[{I|L}P]PPGG{I|L}[QT]{I|L};[{I|L}P]PPV[AG][QT]{I|L};[{I|L}P]PGGP{I|L}[QT]{I|L};[{I|L}P]PP[KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[VP]PP{I|L}Q[QT]{I|L};[VP]PPQ{I|L}[QT]{I|L};[VP]PPAG{I|L}[QT]{I|L} 5.4602;5.2028;4.979;4.6293;4.5316;4.2741;3.5692;3.3189;2.8377;2.488 +;-;-;-;-;-;-;-;-;- + 500 1 1.466 43510.6 1.0 6549 4702 11237 HBL1_DMSO_200M_050219_2,11253 HBL1_DMSO_200M_050219_2,11253,LPPPVQTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11254 60.757 173.0 283550.0 25 0 39039.0 37343 TIYYGEQRST 10 82 609.2946883327547 1216.5748237323094 2 609.2951537966728 MULTI CID FTMS 0 0 0 11237 400295.9375 0.2533094739290063 2 -0.1486587524414062 17 Unmodified _TIYYGEQRST_ ENSG00000127083|ENST00000375550|OMD 13.042465956692816 0.6287021003332052 4 [{I|L}T][DC]{M(Oxidation (M))|F}[VG]{M(Oxidation (M))|F}KST 11 6 + 38.127 0.0 0.0 3.134 3.134 80.041 0.0 0.0 0.0 24.54351698955425 3.780773108224736 3.780773108224736 37.72338625929682 0 0.4247425010840047 2.0 0.5242275032520141 0.0 [{I|L}T][DC]{M(Oxidation (M))|F}[VG]{M(Oxidation (M))|F}KST;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RK][C(Carbamidomethyl (C))N]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 3.134;0.033177 -;- 128 + 1 1.466 44033.2 1.0 6550 4702 11237 HBL1_DMSO_200M_050219_2,11254 HBL1_DMSO_200M_050219_2,11254,TIYYGEQRST False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11255 60.76 141.0 539280.0 25 0 68659.0 + 36319 SYLPEAGQY 9 107 514.2395375993992 1026.4645222655984 2 514.2397338747978 MULTI CID FTMS 0 0 0 11237 377608.75 0.268307537190526 2 -0.1486587524414062 18 Unmodified _SYLPEAGQY_ ENSG00000148110|ENST00000375344|MFSD14B;ENSG00000156875|ENST00000370152|MFSD14A;nc|ENSG00000148110|Q5SR56-2|MFSD14B 10.823927491677226 0.5436922275383211 4 Y 1 8 13.979 0.0 0.0 1.3619 0.0 0.0 845.3900726579797 0.0 845.3900726579797 0.0 -0.7198518129146887 -0.7198518129146887 0.0 0 0.0 0.0 0.0 0.0 + Y 1.3619 + + 351 + 1 1.466 62548.2 1.0 6551 4702 11237 HBL1_DMSO_200M_050219_2,11255 HBL1_DMSO_200M_050219_2,11255,SYLPEAGQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11256 60.765 269.0 521860.0 25 0 59100.0 + 43047 VYFVQKNSL 9 128 549.3028943184846 1096.5912357037691 2 549.3035766482353 MULTI CID FTMS 0 0 0 11237 307388.0625 0.6041739298357597 -2 0.2490730285644531 19 Unmodified _VYFVQKNSL_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 88.95385435242217 0.0153473310052057 4 VY{M(Oxidation (M))|F}VQ{[QN]|[E{I|L}]|[KN]}V 8 2 88.51 0.0 0.0 8.0714 0.0 0.0 0.0 116.05108820133046 116.05108820133046 63.814622925640606 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.6109243748081782 1.4916440611282624 VY{M(Oxidation (M))|F}VQ{[QN]|[E{I|L}]|[KN]}V 8.0714 - 1089 + 1 1.466 112490.3 1.0 6552 4702 11237 HBL1_DMSO_200M_050219_2,11256 HBL1_DMSO_200M_050219_2,11256,VYFVQKNSL True True VYFVQKNSL 60.764774 549.303576648235 4125874.5 11237.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 7.314003308614095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11257 60.767 92.0 534920.0 25 0 59902.0 + 36697 TDDFRMIL 8 78 505.751969809591 1009.489386685982 2 505.7510864138603 MULTI CID FTMS 0 0 0 11237 301661.875 1.0 0 0.0 20 Unmodified _TDDFRMIL_ REV__ENSG00000136628|ENST00000366923|EPRS1 10.183394434864962 0.7604730176254005 4 {I|L} 1 -1 15.485 0.0 0.0 1.5339 0.0 0.0 878.3942919367618 0.0 878.3942919367618 0.0 2.04119982655925 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5339 + + 25 + 1 1.466 45412.4 1.0 6553 4702 11237 HBL1_DMSO_200M_050219_2,11257 HBL1_DMSO_200M_050219_2,11257,TDDFRMIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11259 60.771 5.7 8338500.0 25 0 2255000.0 -1 0 57 340.20952759923875 678.4045022652775 2 340.2090942263603 MULTI CID FTMS 0 0 0 11258 10992455.0 0.8807804231256827 1 -0.1071357727050781 1 4 Y 1 -1 2.2185 0.0 0.0 0.32702 0.0 0.0 339.2356007533619 173.08249841861564 512.3180991719776 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.32702 - 1 + 1 1.466 43979.4 1.0 6554 4703 11258 HBL1_DMSO_200M_050219_2,11259 HBL1_DMSO_200M_050219_2,11259, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11260 60.772 22.0 2240100.0 25 0 562010.0 35771 SVINSNVII 9 74 479.7822962267369 957.5500395202738 2 479.7822448611259 MULTI CID FTMS 0 0 0 11258 2299626.75 0.7250568532895454 1 -0.1071357727050781 2 Unmodified _SVINSNVII_ ENSG00000103449|ENST00000251020|SALL1;ENST00000438101.1_1_X:49432665-49432995:-|nuORF;nc|ENSG00000103449|Q9NSC2-2|SALL1 24.020572477871973 0.2255576514309169 4 [VS]{I|L}GG{M(Oxidation (M))|F}V{I|L}N 9 4 57.802 0.0 0.0 6.0364 0.0 0.0 0.0 68.05137811832265 68.05137811832265 43.19775651841368 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [VS]{I|L}GG{M(Oxidation (M))|F}V{I|L}N 6.0364 - 204 + 1 1.466 42303.2 1.0 6555 4703 11258 HBL1_DMSO_200M_050219_2,11260 HBL1_DMSO_200M_050219_2,11260,SVINSNVII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11261 60.773 13.0 3948300.0 25 0 964750.0 + 38939 TVMDSKIVQV 10 83 560.3073001083503 1118.6000472835003 2 560.3076660037041 MULTI CID FTMS 0 0 0 11258 4513461.5 0.8174562215270017 -1 0.0415229797363281 3 Unmodified _TVMDSKIVQV_ ENSG00000025800|ENST00000373625|KPNA6;ENSG00000114030|ENST00000344337|KPNA1;ENSG00000196911|ENST00000368564|KPNA5 53.40400417844725 0.0601721406801337 4 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VTVQV 10 4 + 60.137 0.0 0.0 5.3761 5.3761 86.011 0.0 0.0 0.0 15.395906230238126 7.314309196763702 7.314309196763702 15.395906230238126 0 0.9802046884880938 2.0 1.066901560044258 0.0 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VTVQV;{NN|[MP]|[D{I|L}]|[EV]}[KS]MVTVQV;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V{NN|[MP]|[D{I|L}]|[EV]}[KA];{NN|[MP]|[D{I|L}]|[EV]}[KS]VMTVQV;[KS][MD]{I|L}VTVQV;[MD][KS]{I|L}VTVQV;{NN|[MP]|[D{I|L}]|[EV]}[KS]MV{NN|[MP]|[D{I|L}]|[EV]}[KA];[KS]{NN|[MP]|[D{I|L}]|[EV]}MVTVQV;{NN|[MP]|[D{I|L}]|[EV]}[KS]VM{NN|[MP]|[D{I|L}]|[EV]}[KA];[KS]{NN|[MP]|[D{I|L}]|[EV]}VMTVQV 5.3761;3.9997;3.6667;3.1935;2.4809;2.3235;2.2904;2.2118;1.4841;1.4055 -;-;-;-;-;-;-;-;-;- 242 1 1.466 44159.6 1.0 6556 4703 11258 HBL1_DMSO_200M_050219_2,11261 HBL1_DMSO_200M_050219_2,11261,TVMDSKIVQV True True TVMDSKIVQV 60.77348 560.307666003704 85551680.0 11258.0 ENSG00000114030|ENST00000344337|KPNA1;;ENSG00000025800|ENST00000373625|KPNA6;;ENSG00000196911|ENST00000368564|KPNA5 5.892706553141276 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11262 60.775 19.0 2828800.0 25 0 529150.0 -1 0 60 348.7226073029 695.4306616726 2 348.7222167849541 MULTI CID FTMS 0 0 0 11258 2521173.75 0.8315298443314211 1 -0.1071357727050781 4 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.466 51510.7 1.0 6557 4703 11258 HBL1_DMSO_200M_050219_2,11262 HBL1_DMSO_200M_050219_2,11262, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11263 60.776 79.0 907470.0 25 0 114850.0 41383 VPKTPVEI 8 88 441.7683182352048 881.5220835372097 2 441.7682067751884 MULTI CID FTMS 0 0 0 11258 827673.75 0.9286736233375218 -1 0.0415229797363281 5 Unmodified _VPKTPVEI_ ENST00000529587.1_1_11:9806704-9806878:-|nuORF 30.63653989081413 0.3996269429323407 4 VP 2 6 45.217 0.0 0.0 5.1294 0.0 0.0 0.0 682.3785349577798 682.3785349577798 17.05591267411002 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VP 5.1294 + + 247 + 1 1.466 59987.3 1.0 6558 4703 11258 HBL1_DMSO_200M_050219_2,11263 HBL1_DMSO_200M_050219_2,11263,VPKTPVEI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11264 60.78 154.0 919940.0 25 0 136160.0 + -1 LPFTKPKVI 9 167 521.7257417828787 1041.4369306325573 2 521.7264282107353 MULTI CID FTMS 0 0 0 11258 593561.375 1.0 0 0.0 6 2 Carbamidomethyl (C) _RGVEYVC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENSG00000169131|ENST00000335815|ZNF354A 14.581692164780916 0.6954967302934248 4 [PA]Q 3 -1 17.024 0.0 0.0 1.6347 0.0 0.0 0.0 742.264725392576 742.264725392576 0.5656589180896567 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [PA]Q 1.6347 - 887 1 1.466 117408.7 1.0 6559 4703 11258 HBL1_DMSO_200M_050219_2,11264 HBL1_DMSO_200M_050219_2,11264,RGVEYVCC False False LPFTKPKVI 60.77953 521.726428210735 2850067.75 11258.0 ENSG00000169131|ENST00000335815|ZNF354A 2.1375885804494223 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11265 60.783 163.0 404430.0 25 0 43582.0 + 37295 TIRCTLTL 8 120 460.76329005459854 919.5120271759972 2 460.7629882693291 MULTI CID FTMS 0 0 0 11258 349875.46875 0.3447553773575958 3 -0.2974090576171875 7 Unmodified _TIRCTLTL_ ENST00000488036.5_1_1:53556210-53556597:-|nuORF 39.957323273325 0.2350051964751539 4 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L}T{I|L} 8 0 + 40.256 0.0 0.0 4.378 4.378 76.646 0.0 0.0 0.0 7.403626894942448 10.172203223519537 7.403626894942448 7.403626894942448 0 0.8182503180159344 1.6989700043360187 1.0189301784845295 0.0 + + [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[KC]T{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KP]D{I|L}T{I|L};[{I|L}P][SG]H[VP]T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{[SA]|[TG]}[VP]T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[TV]|[{I|L}S]}{[RE]|[WV]}GV;{[SA]|[TG]}[VP]H[VP]T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KP]{[TV]|[{I|L}S]}E{I|L} 4.378;3.5728;3.5645;1.6395;1.5939;1.2175;0.5931;0.56745 +;-;-;-;-;-;-;- + 321 1 1.466 52841.6 1.0 6560 4703 11258 HBL1_DMSO_200M_050219_2,11265 HBL1_DMSO_200M_050219_2,11265,TIRCTLTL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11266 60.788 288.0 357170.0 25 0 31820.0 + 1875 ALVSGLHGV 9 127 426.7504412679143 851.4863296026285 2 426.7507812380791 MULTI CID FTMS 0 0 0 11258 252451.703125 1.0 0 0.0 8 Unmodified _ALVSGLHGV_ ENST00000570360.1_1_17:3626633-3627135:-|nuORF;ENST00000572179.5_1_17:3623679-3627129:-|nuORF 49.66892048692302 0.0410958345688192 4 [{I|L}A]VSVAK 7 5 54.825 0.0 0.0 6.4387 0.0 0.0 0.0 180.04364954166252 180.04364954166252 34.60364147389832 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.4247425010840047 [{I|L}A]VSVAK 6.4387 - 536 + 1 1.466 83138.4 1.0 6561 4703 11258 HBL1_DMSO_200M_050219_2,11266 HBL1_DMSO_200M_050219_2,11266,ALVSGLHGV True True ALVSGLHGV 60.788011 426.750781238079 1616715.0 11258.0 ENST00000570360.1_1_17:3626633-3627135:-|nuORF;;ENST00000572179.5_1_17:3623679-3627129:-|nuORF 5.96232811609904 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11267 60.79 118.0 462260.0 25 0 40904.0 38031 TPAVITVTAN 10 91 493.7794559043902 985.5443588755804 2 493.7760497927666 MULTI CID FTMS 0 0 0 11258 256042.4375 0.0650538329698269 5 -0.5006217956542969 9 Unmodified _TPAVITVTAN_ ENSG00000198589|ENST00000651943|LRBA;ENST00000503716.5_1_4:151186876-151502511:-|nuORF;nc|ENSG00000198589|P50851-2|LRBA;nc|ENSG00000198589|P50851|LRBA 14.838274106304384 0.5985701837916485 4 VVS 3 8 19.943 0.0 0.0 2.0236 0.0 0.0 518.269042568743 179.08310877017814 697.3521513389211 0.0 0.0 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 VVS 2.0236 - 60 + 1 1.466 47640.1 1.0 6562 4703 11258 HBL1_DMSO_200M_050219_2,11267 HBL1_DMSO_200M_050219_2,11267,TPAVITVTAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11268 60.797 344.0 328170.0 25 0 34036.0 + 11713 GLGVQRGH 8 133 412.2305183968352 822.4464838604704 2 412.2300903201103 MULTI CID FTMS 0 0 0 11258 233584.140625 0.4063221047557243 8 -0.8432121276855469 10 Unmodified _GLGVQRGH_ REV__ENST00000372324.5_1_1:44456265-44456820:+|nuORF 2.889219685676258 0.8067950007271085 4 S 1 -1 10.745 0.0 0.0 1.3065 0.0 0.0 717.4034368407423 0.0 717.4034368407423 0.0 0.3666996779514253 0.0 0.0 0 0.0 0.0 0.0467716608392861 0.0 S 1.3065 - 25 + 1 1.466 90533.5 1.0 6563 4703 11258 HBL1_DMSO_200M_050219_2,11268 HBL1_DMSO_200M_050219_2,11268,GLGVQRGH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11269 60.804 432.0 263920.0 25 0 19830.0 12477 GVANAAAK 8 165 351.2005081860565 700.386463438913 2 351.1998474001884 MULTI CID FTMS 0 0 0 11258 199111.328125 1.0 0 0.0 11 Unmodified _GVANAAAK_ ENSG00000126500|ENST00000682287|FLRT1;nc|ENSG00000126500|Q9NZU1-1|FLRT1 5.760428011301431 0.7893668129297577 4 W 1 8 13.979 0.0 0.0 1.996 0.0 0.0 496.2960989143021 0.0 496.2960989143021 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.996 - 33 + 1 1.466 91811.0 1.0 6564 4703 11258 HBL1_DMSO_200M_050219_2,11269 HBL1_DMSO_200M_050219_2,11269,GVANAAAK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11270 60.811 384.0 255070.0 25 0 11794.0 26876 PDEEMGFTIDI 11 132 422.8581122713672 1265.5525074143015 3 422.8577148318291 MULTI CID FTMS 0 0 0 11258 181751.46875 1.0 0 0.0 12 Unmodified _PDEEMGFTIDI_ ENSG00000121390|ENST00000338910|PSPC1;nc|ENSG00000121390|Q8WXF1-2|PSPC1 9.38312468134398 0.8308777417566128 4 [DP]Y[CS]TMTVH{I|L} 11 7 + 50.443 0.0 0.0 3.9858 3.9858 69.555 0.0 0.0 0.0 3.0102999566398125 13.117538610557538 3.0102999566398125 3.0102999566398125 0 0.0 1.6989700043360187 0.3054621874040891 0.0 [DP]Y[CS]TMTVH{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PYATMTVH{I|L};[DP]Y[CS]TMTV{I|L}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PYATMTV{I|L}H;[DP]Y[CS][W{M(Oxidation (M))|F}]VH{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PHP[W{M(Oxidation (M))|F}]VH{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PYA[W{M(Oxidation (M))|F}]VH{I|L};[DP]Y[CS]TMT[H{I|L}]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PYATMT[H{I|L}]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YV][WD]TVH{I|L} 3.9858;3.7479;2.9493;2.7114;2.596;2.3581;2.3581;2.1571;1.9192;1.7292 -;-;-;-;-;-;-;-;-;- 824 + 1 1.466 86487.4 1.0 6565 4703 11258 HBL1_DMSO_200M_050219_2,11270 HBL1_DMSO_200M_050219_2,11270,PDEEMGFTIDI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11271 60.817 324.0 321560.0 25 0 22981.0 13355 HLFLFVPA 8 128 472.27439282958017 0 472.2742187380791 PEAK CID FTMS 0 0 0 11258 170133.078125 0.88778753272175 -1 0.0415229797363281 13 Unmodified _HLFLFVPA_ ENST00000591931.1_1_17:43182145-43183004:+|nuORF 11.114462752807354 0.5290325060821968 4 {M(Oxidation (M))|F} 1 7 7.4743 0.0 0.0 0.793 0.0 0.0 285.1682926376274 507.2697465901769 792.4380392278042 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.793 + + 83 + 1 1.466 85083.5 1.0 6566 4703 11258 HBL1_DMSO_200M_050219_2,11271 HBL1_DMSO_200M_050219_2,11271,HLFLFVPA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11272 60.831 800.0 341490.0 25 0 25479.0 + 36682 TCPPPQLAV 9 217 463.2439688314429 924.4733847296858 2 463.2431823611259 MULTI CID FTMS 0 0 0 11258 114021.3125 0.5636602706222207 -3 0.2905960083007812 14 Unmodified _TCPPPQLAV_ ENSG00000187912|ENST00000417570|CLEC17A;nc|ENSG00000187912|Q6ZS10-2|CLEC17A;nc|ENSG00000187912|Q6ZS10-3|CLEC17A 32.30548876998284 0.1201446275138228 4 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}M{M(Oxidation (M))|F}PTV 8 8 + 34.677 0.0 0.0 3.751 3.751 75.004 0.0 0.0 0.0 6.185625271001172 8.016323462331663 6.185625271001172 8.016323462331663 0 0.0 0.0 0.5114393726401688 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}M{M(Oxidation (M))|F}PTV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}M{M(Oxidation (M))|F}PS{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[Y{I|L}]{I|L}{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}M{M(Oxidation (M))|F}TPV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}M[TP]{M(Oxidation (M))|F}V;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}M{M(Oxidation (M))|F}TVP;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}{[YC]|[HE]}PV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KG]{I|L}A[R{M(Oxidation (M))|F}];[{I|L}T]{[YC]|[HE]}{I|L}{I|L}{[CP]|[EA]};{[QV]|[N{I|L}]|[RA]|[KV]}[HK][DV]{[CP]|[EA]} 3.751;2.8839;2.3258;2.2285;1.9007;0.82903;0.77904;0.37283;0.18822;0.11817 -;-;-;-;-;-;-;-;-;- 1048 + 1 1.466 209380.5 0.7699999809265137 6567 4703 11258 HBL1_DMSO_200M_050219_2,11272 HBL1_DMSO_200M_050219_2,11272,TCPPPQLAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11273 60.845 800.0 261560.0 25 0 18990.0 + 16309 IYADYARSL 9 214 536.2771685434842 1070.5397841537683 2 536.2761718630791 MULTI CID FTMS 0 0 0 11258 130805.375 0.2203851928043737 2 -0.2038383483886718 15 Unmodified _IYADYARSL_ ENSG00000120008|ENST00000263461|WDR11;ENST00000497136.6_1_10:122666276-122668222:+|nuORF;ENST00000604714.1_1_10:122667871-122668222:+|nuORF 24.99096001346401 0.2132109383330889 4 {I|L}YADY 5 4 53.43 0.0 0.0 4.9909 0.0 0.0 0.0 442.2414339654906 442.2414339654906 37.23197507588033 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + {I|L}YADY 4.9909 + + 446 + 1 1.466 162885.1 0.8999999761581421 6568 4703 11258 HBL1_DMSO_200M_050219_2,11273 HBL1_DMSO_200M_050219_2,11273,IYADYARSL False True IYADYARSL 60.844759 536.2783 3840689.5 11258.0 ENST00000604714.1_1_10:122667871-122668222:+|nuORF;;ENSG00000120008|ENST00000263461|WDR11;;ENST00000497136.6_1_10:122666276-122668222:+|nuORF 2.930089473724365 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11274 60.86 800.0 405630.0 25 0 82335.0 -1 0 103 807.0560128618812 2418.1462091858434 3 807.3909789919853 MULTI CID FTMS 0 0 0 11258 26617.498046875 0.4670996119087761 1 -0.1071357727050781 16 4 [DP]S{M(Oxidation (M))|F}NEV 7 -1 65.952 0.0 0.0 2.7274 0.0 0.0 0.0 1626.788151895081 1626.788151895081 34.66877792486206 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.666386562212267 1.25 [DP]S{M(Oxidation (M))|F}NEV 2.7274 - 7778 1 1.466 227616.3 0.7300000190734863 6569 4703 11258 HBL1_DMSO_200M_050219_2,11274 HBL1_DMSO_200M_050219_2,11274, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11275 60.874 800.0 69299.0 25 0 4084.4 -1 QPYMPTVSATI 11 109 612.3019371124634 1222.5893212917267 2 612.3007690310478 MULTI CID FTMS 0 0 0 11258 103057.671875 0.7416790529272844 -3 0.2905960083007812 17 Oxidation (M) _QPYM(Oxidation (M))PTVSATI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENST00000551805.1_1_12:57908749-57909143:+|nuORF 16.149105407346934 0.6992268271266642 4 T{I|L} 2 -1 22.034 0.0 0.0 1.8022 0.0 0.0 990.4464512739518 0.0 990.4464512739518 0.0 7.056364969973572 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 T{I|L} 1.8022 + + 216 + 1 1.466 45872.2 0.8700000047683716 6570 4703 11258 HBL1_DMSO_200M_050219_2,11275 HBL1_DMSO_200M_050219_2,11275,QPYMPTVSATI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11277 60.878 26.0 2211500.0 25 0 240480.0 + 3022 AVLDGRELRV 10 56 376.5558874485103 1126.6458329457307 3 376.5557433962822 MULTI CID FTMS 0 0 0 11276 1425100.25 0.5449395312626069 1 -0.0967025756835937 1 Unmodified _AVLDGRELRV_ ENSG00000161547|ENST00000359995|SRSF2;nc|ENSG00000161547|Q01130-2|SRSF2 22.65808497894818 0.4596126414678359 4 AV{I|L}DVNEV 8 4 72.912 0.0 0.0 6.4716 0.0 0.0 0.0 284.17328821353755 284.17328821353755 62.45480993071972 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.3807196863200844 AV{I|L}DVNEV 6.4716 - 223 + 1 1.466 56313.6 1.0 6571 4704 11276 HBL1_DMSO_200M_050219_2,11277 HBL1_DMSO_200M_050219_2,11277,AVLDGRELRV False True AVLDGRELRV 60.87826 376.555743396282 33962368.0 11276.0 nc|ENSG00000161547|Q01130-2|SRSF2;;ENSG00000161547|ENST00000359995|SRSF2 4.757209777832031 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11278 60.879 30.0 1796500.0 25 0 177130.0 + 6492 EAIKALEV 8 83 436.75750922228536 871.5004655113707 2 436.7577697634697 MULTI CID FTMS 0 0 0 11276 1852320.375 1.0 0 0.0 2 Unmodified _EAIKALEV_ ENSG00000172262|ENST00000682664|ZNF131;nc|ENSG00000172262|P52739-2|ZNF131 36.04419817259434 0.3004715606373109 4 [{I|L}A][VG][PG]{I|L}{M(Oxidation (M))|F}V 9 6 [{I|L}A][VG][PG]{I|L}{M(Oxidation (M))|F} + + 16.99 -5.6415 -0.74779 1.9495 1.9495 44.55 0.0 0.0 0.0 0.0 -9.552593986562812 -9.552593986562812 0.0 0 0.0 0.0 0.0 0.0 [{I|L}A][VG][PG]{I|L}{M(Oxidation (M))|F}V 1.9495 - 57 + 1 1.466 45974.6 1.0 6572 4704 11276 HBL1_DMSO_200M_050219_2,11278 HBL1_DMSO_200M_050219_2,11278,EAIKALEV False False EAIKALEV 60.879439 436.75776976347 15082747.0 11276.0 ENSG00000172262|ENST00000682664|ZNF131;;nc|ENSG00000172262|P52739-2|ZNF131 0.9769074022769928 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11279 60.881 15.0 2641600.0 25 0 219950.0 + + -1 KVIDEIYRV 9 77 568.3052833788017 0 568.3050414919853 PEAK CID FTMS 0 0 0 11276 2088751.125 1.0 0 0.0 3 Oxidation (M) _LDKM(Oxidation (M))SEKLGV_ ENSG00000143756|ENST00000366862|FBXO28 24.020572477871973 0.2658879206942018 4 V{I|L}D 3 -1 12.92 0.0 0.0 1.1387 0.0 0.0 129.0451897803701 675.3479731632254 804.3931629435956 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 V{I|L}D 1.1387 - 55 + 1 1.466 37248.4 1.0 6573 4704 11276 HBL1_DMSO_200M_050219_2,11279 HBL1_DMSO_200M_050219_2,11279,LDKMSEKLGV False False KVIDEIYRV 60.880617 568.305041491985 12037659.0 11276.0 ENSG00000143756|ENST00000366862|FBXO28 3.791670242945353 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11280 60.882 38.0 1113400.0 25 0 117950.0 + -1 PDYPCRAMGSI 11 64 633.783662574037 1265.5527722148738 2 633.7844726443291 MULTI CID FTMS 0 0 0 11276 1356806.125 0.948734282267278 1 -0.0967025756835937 4 Carbamidomethyl (C) _PDYPC(Carbamidomethyl (C))RAMGSI_ REV__ENSG00000167680|ENST00000586582|SEMA6B;REV__nc|ENSG00000167680|Q9H3T3-3|SEMA6B 20.41453444215458 0.6105011870913812 4 DPYGNR[{I|L}P]{I|L} 9 -1 80.442 0.0 0.0 6.3563 0.0 0.0 0.0 237.0011690729125 237.0011690729125 65.74925630161275 0.0 0.0 0.0 0 1.6989700043360187 1.6989700043360187 0.0 0.75 DPYGNR[{I|L}P]{I|L} 6.3563 - 198 + 1 1.466 39917.0 1.0 6574 4704 11276 HBL1_DMSO_200M_050219_2,11280 HBL1_DMSO_200M_050219_2,11280,PDYPCRAMGSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11281 60.883 58.0 813440.0 25 0 79441.0 13902 HVVDRVWQ 8 87 519.7765063452861 1037.538459757372 2 519.7772094607353 MULTI CID FTMS 0 0 0 11276 949332.8125 0.7771948415301441 1 -0.0967025756835937 5 Unmodified _HVVDRVWQ_ ENSG00000108510|ENST00000397786|MED13;ENST00000578132.1_1_17:60106900-60108988:-|nuORF;ENST00000581994.1_1_17:60107174-60107384:-|nuORF 13.90604991867851 0.7054780292895731 4 {[TV]|[{I|L}S]}{[WT]|[RM]}NTV{[MS]|[{M(Oxidation (M))|F}A]} 9 7 + 53.222 0.0 0.0 5.1297 5.1297 82.038 0.0 0.0 0.0 14.62952298525451 24.827796776480465 14.62952298525451 9.208187539523747 0 0.0 1.3979400086720375 0.805462187404089 0.805462187404089 {[TV]|[{I|L}S]}{[WT]|[RM]}NTV{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}{[WT]|[RM]}GGTV{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}{[WT]|[RM]}[WK]{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}C[RP]QV[HV];{[TV]|[{I|L}S]}C[{I|L}A][WK]{[MS]|[{M(Oxidation (M))|F}A]};{[TV]|[{I|L}S]}C[RP][AG]V[HV];[{I|L}P][YN][WK]{[MS]|[{M(Oxidation (M))|F}A]};[PS][R{M(Oxidation (M))|F}][WK]{[MS]|[{M(Oxidation (M))|F}A]} 5.1297;4.2422;2.2119;2.0537;1.8724;1.1662;0.50604;0.19084 -;-;-;-;-;-;-;- 318 1 1.466 41275.7 1.0 6575 4704 11276 HBL1_DMSO_200M_050219_2,11281 HBL1_DMSO_200M_050219_2,11281,HVVDRVWQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11282 60.885 46.0 1191800.0 25 0 108010.0 + 13784 HSIPVTVEV 9 93 490.77407866819067 979.5336044031814 2 490.7741577029228 MULTI CID FTMS 0 0 0 11276 906977.25 0.9759647847577808 1 -0.0967025756835937 6 Unmodified _HSIPVTVEV_ ENSG00000108840|ENST00000682912|HDAC5;nc|ENSG00000108840|Q9UQL6-2|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5 48.345845343767074 0.0439967357579942 4 {[TV]|[{I|L}S]}H[VP]TVEV 9 2 + 35.142 0.0 0.0 3.5876 3.5876 73.233 0.0 0.0 0.0 6.548190698079374 6.548190698079374 6.548190698079374 6.548190698079374 0 0.5484550065040281 0.8860566476931632 1.2134679910804405 0.0 {[TV]|[{I|L}S]}H[VP]TVEV;[{I|L}P]EKT{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V];[HS]{I|L}[VP]TVEV;[PA]{I|L}[VS]T{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V];[{I|L}P]A[VS]T{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Y{I|L}]TVEV;[{I|L}P][RH]MVEV;{[QN]|[E{I|L}]|[KN]}[YK]TVEV;{[TV]|[{I|L}S]}H[HK]{I|L}[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}PKT{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V] 3.5876;2.9191;2.8714;2.2809;1.9735;1.7679;1.6637;1.488;1.3233;0.87732 -;-;+;-;-;-;-;-;-;- + 259 1 1.466 49551.1 1.0 6576 4704 11276 HBL1_DMSO_200M_050219_2,11282 HBL1_DMSO_200M_050219_2,11282,HSIPVTVEV True True HSIPVTVEV 60.884514 490.774157702923 7044313.0 11276.0 nc|ENSG00000108840|Q9UQL6-2|HDAC5;;nc|ENSG00000108840|Q9UQL6-3|HDAC5;;ENSG00000108840|ENST00000682912|HDAC5 4.685325304667155 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11283 60.886 51.0 1211200.0 25 0 123360.0 + 2976 AVIEHLERL 9 82 360.54511470779664 1078.61351472359 3 360.5450012087822 MULTI CID FTMS 0 0 0 11276 727795.25 0.6588341713842273 -1 0.1071357727050781 7 Unmodified _AVIEHLERL_ ENSG00000257218|ENST00000551765|GATC 24.99096001346401 0.2132109383330889 4 {[VA]|[{I|L}G]}{I|L}EH{I|L}E[R{I|L}] 9 0 + 64.855 0.0 0.0 6.0128 6.0128 76.134 0.0 0.0 0.0 27.147642715192504 2.218487496163561 2.218487496163561 2.218487496163561 0 0.3494850021680094 2.0 0.4247425010840047 0.0 + + {[VA]|[{I|L}G]}{I|L}EH{I|L}E[R{I|L}];{[VA]|[{I|L}G]}{I|L}EH{I|L}{I|L}{[RE]|[WV]};{[VA]|[{I|L}G]}{I|L}E{I|L}HE[R{I|L}];{[VA]|[{I|L}G]}{I|L}E{I|L}H{I|L}{[RE]|[WV]};{[VA]|[{I|L}G]}{I|L}EH{I|L}[NG]{[QV]|[N{I|L}]|[RA]|[KV]};{[VA]|[{I|L}G]}{I|L}E{I|L}H[NG]{[QV]|[N{I|L}]|[RA]|[KV]} 6.0128;5.8072;5.7338;5.5281;4.818;4.5389 +;-;-;-;-;- + 126 + 1 1.466 60747.7 1.0 6577 4704 11276 HBL1_DMSO_200M_050219_2,11283 HBL1_DMSO_200M_050219_2,11283,AVIEHLERL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11284 60.887 58.0 885020.0 25 0 130000.0 + 45637 YVNDDEDLI 9 89 548.2448293827417 1094.4751058322834 2 548.2441894412041 MULTI CID FTMS 0 0 0 11276 662132.375 0.5831883544186732 -2 0.1486587524414062 8 Unmodified _YVNDDEDLI_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 12.531546534597751 0.4974689918368763 4 [YV]VVQV{M(Oxidation (M))|F} 7 -1 34.965 0.0 0.0 3.1947 0.0 0.0 0.0 256.9910719790209 256.9910719790209 -1.1785425851119484 0.0 -1.1785425851119484 0.0 0 0.0 2.0 0.0 0.3494850021680094 [YV]VVQV{M(Oxidation (M))|F} 3.1947 - 179 1 1.466 45457.4 1.0 6578 4704 11276 HBL1_DMSO_200M_050219_2,11284 HBL1_DMSO_200M_050219_2,11284,YVNDDEDLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11285 60.89 159.0 514880.0 25 0 39518.0 + 2978 AVIEHLERL 9 83 540.3133751508701 1078.61219736854 2 540.3141967654228 MULTI CID FTMS 0 0 0 11276 422288.1875 0.6967762780063317 -1 0.1071357727050781 9 Unmodified _AVIEHLERL_ ENSG00000257218|ENST00000551765|GATC 47.594388314883695 0.0456443387682827 4 {I|L}G{I|L}EH{I|L}E[R{I|L}] 9 2 + 87.427 0.0 0.0 8.1055 8.1055 84.035 0.0 0.0 0.0 62.36494082808356 7.459989556713253 7.459989556713253 3.0102999566398125 0 1.174742501084005 2.0 0.4247425010840047 0.3807196863200844 {I|L}G{I|L}EH{I|L}E[R{I|L}];AV{I|L}EH{I|L}E[R{I|L}];{I|L}G{I|L}EH{I|L}[W{I|L}]V;AV{I|L}EH{I|L}[W{I|L}]V;{I|L}G{I|L}E{I|L}HE[R{I|L}];AV{I|L}E{I|L}HE[R{I|L}];{I|L}G{I|L}E{I|L}H[W{I|L}]V;AV{I|L}E{I|L}H[W{I|L}]V;{I|L}G{I|L}[{M(Oxidation (M))|F}V]{[RE]|[WV]}{M(Oxidation (M))|F}V;{I|L}G{I|L}[{M(Oxidation (M))|F}V]{[RE]|[WV]}V{M(Oxidation (M))|F} 8.1055;7.8264;7.3379;7.0588;6.9192;6.6401;6.1517;5.8726;5.1874;5.1336 -;+;-;-;-;-;-;-;-;- + 518 + 1 1.466 70699.6 1.0 6579 4704 11276 HBL1_DMSO_200M_050219_2,11285 HBL1_DMSO_200M_050219_2,11285,AVIEHLERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11286 60.893 127.0 777270.0 25 0 117640.0 + -1 NMVDIIHSV 9 138 522.7133531767847 1043.4121534203691 2 522.7136108279228 MULTI CID FTMS 0 0 0 11276 386581.0625 1.0 0 0.0 10 Carbamidomethyl (C),Oxidation (M) _APM(Oxidation (M))AC(Carbamidomethyl (C))HEGGV_ ENSG00000114054|ENST00000251654|PCCB;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;nc|ENSG00000114054|P05166-2|PCCB 15.847184025352805 0.5816416552707754 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[YC(Carbamidomethyl (C))]EVNV 8 -1 + 29.378 0.0 0.0 2.8156 2.8156 75.275 0.0 0.0 0.0 4.368128451160516 16.70941280735775 4.368128451160516 9.262137858390812 0 0.0 0.0 1.2302046884880935 0.2742275032520141 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[YC(Carbamidomethyl (C))]EVNV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[YC(Carbamidomethyl (C))]EVGGV;{[QD]|[EN]|[WG]|[KD]|[RS]}[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}VNV;{[SA]|[TG]}C[YC(Carbamidomethyl (C))]EVNV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[YC(Carbamidomethyl (C))]{[NV]|[RG]}EV;[KG]CCD[YQ]EV;{[QD]|[EN]|[WG]|[KD]|[RS]}[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}VGGV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[YC(Carbamidomethyl (C))]QDVV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[HC]VDPNV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[HC][DP]VNV 2.8156;1.9279;1.8871;1.7183;1.4306;1.0305;0.99942;0.97033;0.93276;0.85096 -;-;-;-;-;-;-;-;-;- 532 1 1.466 84245.3 1.0 6580 4704 11276 HBL1_DMSO_200M_050219_2,11286 HBL1_DMSO_200M_050219_2,11286,APMACHEGGV False False NMVDIIHSV 60.893064 522.713610827923 2735152.0 11276.0 ENSG00000114054|ENST00000251654|PCCB;;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;;nc|ENSG00000114054|P05166-2|PCCB 2.3700379530588784 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11287 60.898 255.0 283440.0 25 0 19930.0 + 2895 GLYIVRGDNV 10 119 553.303678105828 1104.592803278456 2 553.3027221560478 MULTI CID FTMS 0 0 0 11276 280459.15625 1.0 0 0.0 11 Unmodified _AVFNQVAFPL_ ENSG00000128534|ENST00000249299|LSM8 20.453626601364224 0.5043500229302764 4 {[VA]|[{I|L}G]}Y{I|L}[W{M(Oxidation (M))|F}]PP{I|L} 9 6 + 48.227 0.0 0.0 4.3661 4.3661 82.505 0.0 0.0 0.0 36.008629895458654 4.894549897933871 4.894549897933871 19.01863755803668 0 0.7134679910804405 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}Y{I|L}[W{M(Oxidation (M))|F}]PP{I|L};{[VA]|[{I|L}G]}Y{I|L}V[EP]{M(Oxidation (M))|F}[PA];{[VA]|[{I|L}G]}Y[RV]E[{I|L}A]{[QG]|[NA]};{[VA]|[{I|L}G]}[NS]VY[PS][R{I|L}];{[VA]|[{I|L}G]}Y[RV][DN][R{I|L}];{[VA]|[{I|L}G]}G[SG]VY[PS][R{I|L}];{[VA]|[{I|L}G]}Y[VS]N[PS][R{I|L}];[{I|L}V]EEY[PS][R{I|L}] 4.3661;2.6443;1.8026;1.3499;1.2112;1.0814;1.0567;0.14032 -;-;-;-;-;-;-;- 448 + 1 1.466 65513.3 1.0 6581 4704 11276 HBL1_DMSO_200M_050219_2,11287 HBL1_DMSO_200M_050219_2,11287,AVFNQVAFPL False False GLYIVRGDNV 60.897836 553.302722156048 1744805.75 11276.0 ENSG00000128534|ENST00000249299|LSM8 4.116309563318889 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11288 60.91 727.0 210950.0 25 0 25241.0 + 37941 TMAKESSIIGV 11 182 576.3018276005673 1150.5891022679343 2 576.3034545779228 MULTI CID FTMS 0 0 0 11276 202432.1875 1.0 0 0.0 12 Oxidation (M) _TM(Oxidation (M))AKESSIIGV_ nc|ENSG00000116791|Q08257-2|CRYZ;ENSG00000116791|ENST00000340866|CRYZ;nc|ENSG00000116791|Q08257-3|CRYZ 43.9818466556824 0.1510575460884947 4 S{I|L}{I|L}R 4 8 48.972 0.0 0.0 4.2563 0.0 0.0 663.2905140607437 0.0 663.2905140607437 0.0 30.80214135444757 0.0 0.0 0 1.0 0.0 1.305462187404089 0.0 S{I|L}{I|L}R 4.2563 - 1687 1 1.466 114902.9 1.0 6582 4704 11276 HBL1_DMSO_200M_050219_2,11288 HBL1_DMSO_200M_050219_2,11288,TMAKESSIIGV False False TMAKESSIIGV 60.910452 576.303454577923 1151653.875 11276.0 nc|ENSG00000116791|Q08257-2|CRYZ;;ENSG00000116791|ENST00000340866|CRYZ;;nc|ENSG00000116791|Q08257-3|CRYZ 6.670646190643311 2.0 True 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11289 60.924 760.0 284890.0 25 0 24074.0 + -1 ECMGTDDSTV 10 232 537.191935192903 1072.369317452606 2 537.1906005740166 MULTI CID FTMS 0 0 0 11276 188595.703125 1.0 0 0.0 13 Oxidation (M) _ECM(Oxidation (M))GTDDSTV_ REV__ENSG00000119487|ENST00000265960|MAPKAP1;REV__nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;REV__nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;REV__nc|ENSG00000119487|Q9BPZ7-5|MAPKAP1;REV__nc|ENSG00000119487|Q9BPZ7-6|MAPKAP1 6.723162845929126 0.6955379296933136 4 DQVNV 5 -1 25.974 0.0 0.0 2.4221 0.0 0.0 499.1165943830094 0.0 499.1165943830094 0.0 12.875240784723374 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 DQVNV 2.4221 - 616 1 1.466 166348.2 1.0 6583 4704 11276 HBL1_DMSO_200M_050219_2,11289 HBL1_DMSO_200M_050219_2,11289,ECMGTDDSTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11290 60.928 208.0 397850.0 25 0 25444.0 + 24240 MAPKAWTV 8 122 452.2412810737047 902.4680092142096 2 452.2411987185478 MULTI CID FTMS 0 0 0 11276 173071.5 0.4129260762826716 2 -0.1902732849121093 14 Unmodified _MAPKAWTV_ ENSG00000138801|ENST00000265174|PAPSS1 16.942295170755138 0.6606234159769251 4 {[DS]|[MA]|[CV]|TT}P 3 5 32.447 0.0 0.0 3.5954 0.0 0.0 0.0 600.3157442682249 600.3157442682249 19.348331157524967 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {[DS]|[MA]|[CV]|TT}P 3.5954 + + 187 + 1 1.466 71080.3 1.0 6584 4704 11276 HBL1_DMSO_200M_050219_2,11290 HBL1_DMSO_200M_050219_2,11290,MAPKAWTV False True MAPKAWTV 60.927556 452.241198718548 7757480.0 11276.0 ENSG00000138801|ENST00000265174|PAPSS1 3.095679839452108 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11291 60.941 800.0 344150.0 25 0 28273.0 + 45770 YYITNDTVQTY 11 156 690.8190431786885 1379.623533424177 2 690.8204833865166 MULTI CID FTMS 0 0 0 11276 171567.40625 0.0145122821041833 -4 0.3977317810058594 15 Unmodified _YYITNDTVQTY_ ENSG00000144028|ENST00000323853|SNRNP200 96.36657018975838 0.0004425842802536 4 [YT]QVYDTV 8 7 57.804 0.0 0.0 4.1899 0.0 0.0 0.0 407.155880786487 407.155880786487 1.3865999516866625 0.0 0.0 0.0 0 0.2614393726401688 1.3979400086720375 1.6307196863200843 1.1872730750747862 [YT]QVYDTV 4.1899 - 41354 1 1.466 193080.5 0.9800000190734864 6585 4704 11276 HBL1_DMSO_200M_050219_2,11291 HBL1_DMSO_200M_050219_2,11291,YYITNDTVQTY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11292 60.955 800.0 188110.0 25 0 24026.0 + + 35659 KQSNVQILV 9 183 514.8078804071603 1027.6012078811204 2 514.8087646365166 MULTI CID FTMS 0 0 0 11276 138911.53125 0.7303555784557731 2 -0.1902732849121093 16 Unmodified _SVDINRLIV_ nc|ENSG00000100105|Q9HBE1-4|PATZ1;nc|ENSG00000100105|Q9HBE1-2|PATZ1;nc|ENSG00000100105|Q9HBE1-3|PATZ1;ENSG00000100105|ENST00000266269|PATZ1 26.88365393820708 0.1891292719743517 4 {[TV]|[{I|L}S]}PMKQ{I|L}[{I|L}V] 9 -1 + 33.659 0.0 0.0 3.2755 3.2755 62.845 0.0 0.0 0.0 0.5199848060321699 7.147642715192507 0.5199848060321699 0.5199848060321699 0 0.3494850021680094 0.7695510786217261 0.0916328861051033 0.7302046884880937 {[TV]|[{I|L}S]}PMKQ{I|L}[{I|L}V];[VS][RD]VQ{I|L}[{I|L}V];[VP]TMKQ{I|L}[{I|L}V];[AG]A[QT]KQ{I|L}[{I|L}V];[TP]VMKQ{I|L}[{I|L}V];[QA][QT]KQ{I|L}[{I|L}V];{I|L}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}VQ{I|L}[{I|L}V];[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}VQ{I|L}[{I|L}V];[AG]{I|L}{[ES]|[DT]|[{I|L}C]}VQ{I|L}[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}[QT]VQ{I|L}[{I|L}V] 3.2755;3.2249;3.0056;2.9817;2.9443;2.8761;2.639;2.5669;2.3958;2.3876 -;-;-;-;-;-;-;-;-;- 1259 1 1.466 117797.2 0.8999999761581421 6586 4704 11276 HBL1_DMSO_200M_050219_2,11292 HBL1_DMSO_200M_050219_2,11292,SVDINRLIV False False KQSNVQILV 60.955221 514.808764636517 1434923.875 11276.0 nc|ENSG00000100105|Q9HBE1-4|PATZ1;;nc|ENSG00000100105|Q9HBE1-2|PATZ1;;nc|ENSG00000100105|Q9HBE1-3|PATZ1;;ENSG00000100105|ENST00000266269|PATZ1 3.034940520922343 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11293 60.971 800.0 233980.0 25 0 27862.0 -1 0 117 978.9378657627664 1955.8611785923329 2 978.940966784954 MULTI CID FTMS 0 0 0 11276 119914.078125 0.5353074430428979 -4 0.3977317810058594 17 4 {M(Oxidation (M))|F} 1 -1 11.42 0.0 0.0 0.58389 0.0 0.0 1790.78141892612 0.0 1790.78141892612 0.0 0.4508831517454403 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.58389 - 1388 + 1 1.466 127380.4 0.7599999904632568 6587 4704 11276 HBL1_DMSO_200M_050219_2,11293 HBL1_DMSO_200M_050219_2,11293, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11295 60.98 383.0 404990.0 25 0 46356.0 + + 42230 KAIEQADLL 9 177 500.7880357153277 999.5615184974554 2 500.7874023318291 MULTI CID FTMS 0 0 0 11294 103620.6953125 0.4728410951916722 2 -0.1976966857910156 1 Unmodified _VSLEAGAQLL_ ENSG00000106367|ENST00000337619|AP1S1;nc|ENSG00000182287|P56377-2|AP1S2;ENSG00000182287|ENST00000672987|AP1S2;nc|ENSG00000182287|P56377|AP1S2 29.081581746732265 0.3152867722954398 4 {[TV]|[{I|L}S]}V[RN]AD{I|L}{I|L} 9 -1 + 42.283 0.0 0.0 4.2301 4.2301 67.049 0.0 0.0 0.0 7.81388798614396 6.944152858125108 6.944152858125108 1.249387366082999 0 0.5242275032520141 1.6989700043360187 0.1643943297944484 0.3054621874040891 {[TV]|[{I|L}S]}V[RN]AD{I|L}{I|L};{[TV]|[{I|L}S]}VAAQAD{I|L}{I|L};{[TV]|[{I|L}S]}[Q{I|L}]QAD{I|L}{I|L};{[TV]|[{I|L}S]}VAAQW{I|L}{I|L};{[TV]|[{I|L}S]}[Q{I|L}]QW{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}{I|L}AD{I|L}{I|L};[VS]{I|L}[RN]AD{I|L}{I|L};{[TV]|[{I|L}S]}V{[CP]|[EA]}QQ{I|L}{I|L};[VS]{I|L}AAQAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E[{I|L}V]AD{I|L}{I|L} 4.2301;4.1051;3.929;3.7528;3.582;3.4484;3.3963;3.3815;3.2713;3.2264 -;-;-;-;-;-;-;-;-;- 2594 1 1.467 121236.5 1.0 6588 4705 11294 HBL1_DMSO_200M_050219_2,11295 HBL1_DMSO_200M_050219_2,11295,VSLEAGAQLL False False KAIEQADLL 60.980418 500.787402331829 1850987.5 11294.0 ENSG00000106367|ENST00000337619|AP1S1;;nc|ENSG00000182287|P56377-2|AP1S2;;ENSG00000182287|ENST00000672987|AP1S2;;nc|ENSG00000182287|P56377|AP1S2 0.2807962149381637 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11296 60.982 21.0 2238600.0 25 0 305880.0 25345 NALVCDCDLM 10 72 548.7264304816301 1095.4383080300602 2 548.7274658083916 MULTI CID FTMS 0 0 0 11294 1397838.125 0.0977774202993762 -3 0.245361328125 2 Unmodified _NALVCDCDLM_ ENSG00000147485|ENST00000356297|PXDNL;nc|ENSG00000147485|A1KZ92-2|PXDNL 10.823927491677226 0.6659270209832991 4 {[QG]|[NA]}{I|L} 3 7 28.829 0.0 0.0 2.6318 0.0 0.0 0.0 794.2511491767976 794.2511491767976 10.529076081663131 0.0 0.0 0.0 0 0.0 2.0 0.0 0.2887254899964357 + {[QG]|[NA]}{I|L} 2.6318 + + 60 1 1.467 43073.2 1.0 6589 4705 11294 HBL1_DMSO_200M_050219_2,11296 HBL1_DMSO_200M_050219_2,11296,NALVCDCDLM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11297 60.983 36.0 1959100.0 25 0 235980.0 -1 0 79 375.7233148681577 0 375.7233459353447 PEAK CID FTMS 0 0 0 11294 1347811.75 1.0 0 0.0 3 4 V{I|L}K 3 -1 17.422 0.0 0.0 2.3246 0.0 0.0 292.1047047392912 114.05658136539296 406.16128610468417 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.3252574989159953 V{I|L}K 2.3246 - 33 + 1 1.467 60250.8 1.0 6590 4705 11294 HBL1_DMSO_200M_050219_2,11297 HBL1_DMSO_200M_050219_2,11297, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11298 60.984 30.0 1554800.0 25 0 153870.0 + 22156 LPPSALQSV 9 87 456.26346091798274 910.5123689027656 2 456.2635375857353 MULTI CID FTMS 0 0 0 11294 1126615.25 0.8008855758042136 4 -0.4097976684570312 4 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 30.22481116460888 0.1466181017706357 4 STK{I|L}P 5 8 28.175 0.0 0.0 3.0944 0.0 0.0 129.06523863108424 252.09949670963127 381.16473534071554 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 STK{I|L}P 3.0944 - 238 + 1 1.467 44543.5 1.0 6591 4705 11294 HBL1_DMSO_200M_050219_2,11298 HBL1_DMSO_200M_050219_2,11298,LPPSALQSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11299 60.985 61.0 747600.0 25 0 71444.0 + 26473 NTLEDEMKM 9 95 555.7436852448483 1109.4728175564965 2 555.7442504763603 MULTI CID FTMS 0 0 0 11294 677330.8125 0.5840608881430491 -1 0.0967025756835937 5 Unmodified _NTLEDEMKM_ REV__ENSG00000177409|ENST00000318238|SAMD9L 15.847184025352805 0.4077185912009129 4 EQ{I|L}S[YC(Carbamidomethyl (C))] 6 -1 25.423 0.0 0.0 2.2915 0.0 0.0 311.14778334785314 0.0 311.14778334785314 0.0 7.46462170693448 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 EQ{I|L}S[YC(Carbamidomethyl (C))] 2.2915 - 193 1 1.467 42923.0 1.0 6592 4705 11294 HBL1_DMSO_200M_050219_2,11299 HBL1_DMSO_200M_050219_2,11299,NTLEDEMKM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11300 60.989 176.0 540350.0 25 0 61700.0 + 9320 FIHQHFVEV 9 105 385.8697309350682 1154.5873634054046 3 385.8694640994072 MULTI CID FTMS 0 0 0 11294 361995.9375 0.2430145538484673 -2 0.2038383483886718 6 Unmodified _FIHQHFVEV_ ENSG00000114648|ENST00000232766|KLHL18;ENST00000461084.5_1_3:47324437-47378284:+|nuORF;nc|ENSG00000114648|O94889-2|KLHL18 15.248480904072842 0.4239247793462406 4 [HQ]H{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}VEV 9 4 + 30.631 0.0 0.0 2.653 2.653 72.707 0.0 0.0 0.0 6.558167323414764 11.907658216538607 6.558167323414764 8.4556125503638 0 0.3182503180159344 0.0 0.0 0.5387254899964358 [HQ]H{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}VEV;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}VEV;[AG]HH{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}VEV;[{M(Oxidation (M))|F}V]VA{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}VQQ;HHV[HD]{I|L}{[RE]|[WV]}{I|L} 2.653;1.9207;1.3839;0.41435;0.2987 -;-;-;-;- 323 1 1.467 93171.3 1.0 6593 4705 11294 HBL1_DMSO_200M_050219_2,11300 HBL1_DMSO_200M_050219_2,11300,FIHQHFVEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11301 60.993 189.0 451800.0 25 0 24452.0 + 2022 APFQSMQTV 9 130 504.7444425330977 1007.4743321329954 2 504.7442809939384 MULTI CID FTMS 0 0 0 11294 235946.953125 0.1874639487750826 -2 0.2038383483886718 7 Unmodified _APFQSMQTV_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 43.85829265575387 0.0542763391141878 4 {[TV]|[{I|L}S]}QMAMQTV 9 5 + 59.856 0.0 0.0 5.9412 5.9412 81.814 0.0 0.0 0.0 6.157435757487484 8.072420927871988 6.157435757487484 6.157435757487484 0 0.6677353201839438 0.958607314841775 1.4489700043360187 0.5 {[TV]|[{I|L}S]}QMAMQTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QSAMQTV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QPAMQTV;[PA]{M(Oxidation (M))|F}GSAMQTV;{[TV]|[{I|L}S]}QMAM[AG]TV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AGSAMQTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QASMQTV;[{I|L}V]C(Carbamidomethyl (C))SAMQTV;{[TV]|[{I|L}S]}[AG]MAMQTV;[PA]{M(Oxidation (M))|F}GASMQTV 5.9412;5.33;5.082;5.0487;5.0272;4.9858;4.9565;4.563;4.5309;4.4271 -;-;-;-;-;-;-;-;-;- 1479 1 1.467 67058.0 1.0 6594 4705 11294 HBL1_DMSO_200M_050219_2,11301 HBL1_DMSO_200M_050219_2,11301,APFQSMQTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11302 60.995 139.0 506870.0 25 0 51577.0 + 42530 VTLLCVCDCV 10 105 534.2491268808701 1066.48370082854 2 534.2484619021416 MULTI CID FTMS 0 0 0 11294 197792.6875 1.0 0 0.0 8 Unmodified _VTLLCVCDCV_ REV__ENST00000539526.5_1_11:117708658-117708883:-|nuORF 21.74664581756881 0.480091245866545 4 [YT]P 3 -1 30.215 0.0 0.0 2.8332 0.0 0.0 0.0 702.2931612604124 702.2931612604124 4.4133185204407965 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 [YT]P 2.8332 - 290 + 1 1.467 60619.6 1.0 6595 4705 11294 HBL1_DMSO_200M_050219_2,11302 HBL1_DMSO_200M_050219_2,11302,VTLLCVCDCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11303 61.009 800.0 123310.0 25 0 8139.1 + -1 HNLLEGGQEDFESS 14 106 781.3419037428796 1560.669254552559 2 781.3428832888603 MULTI CID FTMS 0 0 0 11294 154592.40625 1.0 0 0.0 9 Oxidation (M) _EDFREEM(Oxidation (M))WTFR_ ENSG00000171403|ENST00000246662|KRT9;P35527 2.9952420565917617 0.861016188266951 4 [HN]{I|L}{I|L}EGGQED{M(Oxidation (M))|F}E{[CA]|SS} 14 -1 + 92.216 0.0 0.0 5.9087 5.9087 82.27 0.0 0.0 0.0 7.569619513137056 69.28456906244314 7.569619513137056 6.667853209646182 0 0.5 0.0 0.3807196863200844 0.8494850021680094 [HN]{I|L}{I|L}EGGQED{M(Oxidation (M))|F}E{[CA]|SS};[HN]{I|L}{I|L}WGQED{M(Oxidation (M))|F}E{[CA]|SS};[HN]{I|L}{I|L}ENQED{M(Oxidation (M))|F}E{[CA]|SS};[HN]{I|L}{I|L}EGG[AG]ED{M(Oxidation (M))|F}E{[CA]|SS};{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}EGGQED{M(Oxidation (M))|F}E{[CA]|SS};[HN]{I|L}{I|L}WG[AG]ED{M(Oxidation (M))|F}E{[CA]|SS};[HN]{I|L}{I|L}EN[AG]ED{M(Oxidation (M))|F}E{[CA]|SS};[AG]VH{I|L}EGGQED{M(Oxidation (M))|F}E{[CA]|SS};{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}ENQED{M(Oxidation (M))|F}E{[CA]|SS};{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}WGQED{M(Oxidation (M))|F}E{[CA]|SS} 5.9087;5.4815;5.4815;5.3288;5.1372;4.9002;4.9002;4.7775;4.71;4.71 -;-;-;-;-;-;-;-;-;- 879 1 1.467 75004.1 0.8399999737739563 6596 4705 11294 HBL1_DMSO_200M_050219_2,11303 HBL1_DMSO_200M_050219_2,11303,EDFREEMWTFR False False HNLLEGGQEDFESS 61.009187 781.34288328886 1112624.625 11294.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 8.499399820963541 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11304 61.015 341.0 199050.0 25 0 12274.0 + + 1479 SAHKYFPVV 9 119 523.781170876853 1045.547788820506 2 524.7845947146416 MULTI CID FTMS 0 0 0 11294 176498.28125 1.0 0 0.0 10 Unmodified _ALGAWIESTV_ ENSG00000135040|ENST00000361671|NAA35 12.872603262515298 0.6315522313594999 4 TV 2 -1 20.261 0.0 0.0 1.9378 0.0 0.0 827.4210473427701 0.0 827.4210473427701 0.0 8.667053245199625 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TV 1.9378 + + 515 + 1 1.467 61024.1 1.0 6597 4705 11294 HBL1_DMSO_200M_050219_2,11304 HBL1_DMSO_200M_050219_2,11304,ALGAWIESTV False False SAHKYFPVV 61.015368 524.784594714642 3148712.75 11294.0 ENSG00000135040|ENST00000361671|NAA35 2.9455226262410483 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11305 61.021 332.0 376490.0 25 0 24052.0 + 9321 FIHQHFVEV 9 131 578.3010171434178 1154.5874813536354 2 578.3011352419853 MULTI CID FTMS 0 0 0 11294 137340.8125 0.1751776526728815 -2 0.2038383483886718 11 Unmodified _FIHQHFVEV_ ENSG00000114648|ENST00000232766|KLHL18;ENST00000461084.5_1_3:47324437-47378284:+|nuORF;nc|ENSG00000114648|O94889-2|KLHL18 51.41523569358685 0.0372669606867193 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HQH{M(Oxidation (M))|F}VEV 9 0 + 63.801 0.0 0.0 5.5258 5.5258 83.698 0.0 0.0 0.0 11.19788758288393 16.478174818886373 11.19788758288393 9.208187539523747 0 1.424742501084005 0.619788758288394 0.3054621874040891 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HQH{M(Oxidation (M))|F}VEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H[AG]H{M(Oxidation (M))|F}VEV;[HQ]{M(Oxidation (M))|F}{I|L}H{M(Oxidation (M))|F}VEV;[HQ]{M(Oxidation (M))|F}H{I|L}{M(Oxidation (M))|F}VEV;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}QH{M(Oxidation (M))|F}VEV;[HQ]H{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}VEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[HA]H{M(Oxidation (M))|F}VEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))E]|[WC]}{I|L}{M(Oxidation (M))|F}VEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HNH{M(Oxidation (M))|F}{I|L}EV;{[{M(Oxidation (M))|F}H]|[RQ]}Q{I|L}H{M(Oxidation (M))|F}VEV 5.5258;4.7283;4.556;4.514;4.4511;4.4385;4.3555;4.2693;4.0455;4.0379 +;-;-;-;-;-;-;-;-;- + 1136 1 1.467 98836.3 1.0 6598 4705 11294 HBL1_DMSO_200M_050219_2,11305 HBL1_DMSO_200M_050219_2,11305,FIHQHFVEV True True FIHQHFVEV 61.021401 578.301135241985 5913554.5 11294.0 nc|ENSG00000114648|O94889-2|KLHL18;;ENSG00000114648|ENST00000232766|KLHL18;;ENST00000461084.5_1_3:47324437-47378284:+|nuORF 8.317914962768555 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11306 61.035 800.0 235150.0 25 0 17567.0 + + 14480 AVFTDKDANVRL 12 139 674.8641553084854 1347.7137576837706 2 674.8651000857353 MULTI CID FTMS 0 0 0 11294 127688.8515625 0.3249034464130077 -2 0.2038383483886718 12 Unmodified _IGFRSLWEIID_ ENST00000429235.1_1_9:103108567-103109562:-|nuORF;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 29.84058131909904 0.3915366693542702 4 {I|L}G{M(Oxidation (M))|F}TDKDANVR{I|L} 12 -1 + 113.4 0.0 0.0 8.4142 8.4142 89.668 0.0 0.0 0.0 86.07400367500813 10.482004349463525 10.482004349463525 6.817496819840656 0 2.110924374808178 1.6989700043360187 0.805462187404089 0.6694451763165201 {I|L}G{M(Oxidation (M))|F}TDKDANVR{I|L};AV{M(Oxidation (M))|F}TDKDANVR{I|L};{I|L}G{M(Oxidation (M))|F}TDKDA[RV]N{I|L};{I|L}G{M(Oxidation (M))|F}{I|L}CKDANVR{I|L};{I|L}G{M(Oxidation (M))|F}TDKGENVR{I|L};{I|L}G{M(Oxidation (M))|F}TDKDAGGVR{I|L};{I|L}G{M(Oxidation (M))|F}TDKD{I|L}[{I|L}P]MV;{I|L}G{M(Oxidation (M))|F}TDKWNVR{I|L};{I|L}G{M(Oxidation (M))|F}TDKD[KT]PN{I|L};{I|L}G{M(Oxidation (M))|F}TDKDVVQN{I|L} 8.4142;7.9083;7.8585;7.7777;7.745;7.7391;7.6282;7.6084;7.5972;7.5632 -;-;-;-;-;-;-;-;-;- 8661 + 1 1.467 136511.5 0.8399999737739563 6599 4705 11294 HBL1_DMSO_200M_050219_2,11306 HBL1_DMSO_200M_050219_2,11306,IGFRSLWEIID False False AVFTDKDANVRL 61.035239 674.865100085735 3023536.0 11294.0 ENST00000429235.1_1_9:103108567-103109562:-|nuORF;;ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 8.064781347910563 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11307 61.05 800.0 177730.0 25 0 11994.0 + 41368 VPKKFDVSI 9 173 516.8080724048979 1031.6015918765956 2 516.8088867068291 MULTI CID FTMS 0 0 0 11294 116105.0 1.0 0 0.0 13 Unmodified _VPKKFDVSI_ ENSG00000058056|ENST00000263966|USP13;nc|ENSG00000058056|Q92995-2|USP13 55.50274090549119 0.0285720310785888 4 {[TV]|[{I|L}S]}T[WK]VS{I|L}V 9 5 + 48.35 0.0 0.0 4.6869 4.6869 68.962 0.0 0.0 0.0 3.7751372576825295 19.12848732905715 3.7751372576825295 1.2628749457997657 0 0.25 1.3010299956639813 0.8737125054200234 0.0 {[TV]|[{I|L}S]}T[WK]VS{I|L}V;{[TV]|[{I|L}S]}T[WK]VVTV;[VP]K[YQ]VS{I|L}V;[VP]K[YQ]VVTV;{[TV]|[{I|L}S]}T[WK]VSV{I|L};{[TV]|[{I|L}S]}T[WK]VVS{I|L};VPK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YR]{I|L};[KP][YQ]VVS{I|L}V;{[TV]|[{I|L}S]}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KP{I|L}V;[KP][YQ]VVVTV 4.6869;4.5645;4.2318;4.1093;3.9821;3.8596;3.7921;3.7423;3.7137;3.6199 -;-;-;-;-;-;-;-;-;- 2246 1 1.467 110456.2 0.7799999713897705 6600 4705 11294 HBL1_DMSO_200M_050219_2,11307 HBL1_DMSO_200M_050219_2,11307,VPKKFDVSI True True VPKKFDVSI 61.050247 516.808886706829 1002294.0 11294.0 ENSG00000058056|ENST00000263966|USP13;;nc|ENSG00000058056|Q92995-2|USP13 4.544464429219564 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11308 61.064 800.0 303810.0 25 0 22310.0 -1 LTHCKCHV 8 233 499.2378438600034 996.4611347868068 2 499.2375060915947 MULTI CID FTMS 0 0 0 11294 96649.5078125 0.1604620930240763 -4 0.3920669555664062 14 Carbamidomethyl (C) _LTHC(Carbamidomethyl (C))KCHV_ ENST00000431285.5_1_3:9471730-9475177:+|nuORF 19.438996006549623 0.6237395211498085 4 [VS]{I|L}[RK]{I|L}H 7 -1 20.416 0.0 0.0 2.0488 0.0 0.0 0.0 159.92539943098873 159.92539943098873 2.21446831611102 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.5501648626366046 0.0 [VS]{I|L}[RK]{I|L}H 2.0488 - 1300 1 1.467 180253.5 0.6399999856948853 6601 4705 11294 HBL1_DMSO_200M_050219_2,11308 HBL1_DMSO_200M_050219_2,11308,LTHCKCHV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11310 61.069 9.6 4339700.0 25 0 634770.0 + 2313 AQIGSYVHV 9 65 487.2586759788175 972.502799024435 2 487.2590209841728 MULTI CID FTMS 0 0 0 11309 4535041.5 0.2343018669063911 2 -0.2032127380371093 1 Unmodified _AQIGSYVHV_ ENSG00000166847|ENST00000300087|DCTN5;ENST00000566053.5_1_16:23652819-23678462:+|nuORF;nc|ENSG00000166847|Q9BTE1-2|DCTN5 36.04419817259434 0.0971720506436186 4 [QA]{I|L}GSYV[HV] 9 0 + 50.072 0.0 0.0 5.1488 5.1488 87.289 0.0 0.0 0.0 36.09243748081781 7.147642715192504 7.147642715192504 50.07183756753818 0 0.5 1.0969100130080565 0.0 0.0 + + [QA]{I|L}GSYV[HV] 5.1488 + + 51 + 1 1.467 37036.0 1.0 6602 4706 11309 HBL1_DMSO_200M_050219_2,11310 HBL1_DMSO_200M_050219_2,11310,AQIGSYVHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11311 61.07 8.8 4197800.0 25 0 769930.0 26925 PDSFNIPGSS 10 63 510.735203921396 1019.455854909592 2 510.7356140017509 MULTI CID FTMS 0 0 0 11309 5686395.5 0.5858370907165291 2 -0.2032127380371093 2 Unmodified _PDSFNIPGSS_ ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5 18.1463463914782 0.5430639438673815 4 [DP]S{M(Oxidation (M))|F}NE 6 5 29.71 0.0 0.0 2.9143 0.0 0.0 0.0 327.16829072601473 327.16829072601473 14.225534297491294 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.4247425010840047 [DP]S{M(Oxidation (M))|F}NE 2.9143 - 49 1 1.467 33040.6 1.0 6603 4706 11309 HBL1_DMSO_200M_050219_2,11311 HBL1_DMSO_200M_050219_2,11311,PDSFNIPGSS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11312 61.071 11.0 3780600.0 25 0 837540.0 + + 12736 KTIEDDLVSA 10 63 545.7852271992537 1089.5559014653072 2 545.7854492068291 MULTI CID FTMS 0 0 0 11309 5507111.5 0.7329435692790667 1 -0.1041259765625 3 Unmodified _GVMSVMPLVSA_ ENSG00000177192|ENST00000376649|PUS1;nc|ENSG00000177192|Q9Y606-2|PUS1;ENST00000544662.1_1_12:132414461-132416977:+|nuORF 29.081581746732265 0.4093582134107448 4 DD{I|L}VSA 6 -1 41.956 0.0 0.0 3.8507 0.0 0.0 471.2693653791032 0.0 471.2693653791032 0.0 22.491596866368013 0.0 0.0 0 0.6989700043360187 0.0 0.805462187404089 0.0 DD{I|L}VSA 3.8507 - 33 1 1.467 42299.2 1.0 6604 4706 11309 HBL1_DMSO_200M_050219_2,11312 HBL1_DMSO_200M_050219_2,11312,GVMSVMPLVSA False False KTIEDDLVSA 61.07089 545.785449206829 110944288.0 11309.0 ENSG00000177192|ENST00000376649|PUS1;;nc|ENSG00000177192|Q9Y606-2|PUS1;;ENST00000544662.1_1_12:132414461-132416977:+|nuORF 7.824065208435059 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11313 61.072 26.0 2582800.0 25 0 325150.0 + 3903 DALDVANKI 9 91 479.7639217668962 957.5132906005924 2 479.7644225955009 MULTI CID FTMS 0 0 0 11309 2006270.375 0.1142257333203371 -2 0.1902732849121093 4 Unmodified _DALDVANKI_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;ENST00000491601.1_1_17:38595721-38595772:-|nuORF 92.4914307365334 0.0139747738690111 4 {[DA]|[EG]}{I|L}DVANK{I|L} 9 0 + 97.897 0.0 0.0 10.224 10.224 94.013 0.0 0.0 0.0 59.06250717957419 12.25268461881508 12.25268461881508 9.208187539523747 0 1.1549471895720984 2.0 0.3807196863200844 1.336696871556164 + + {[DA]|[EG]}{I|L}DVANK{I|L};{[DA]|[EG]}{I|L}DVAGGK{I|L};{[DA]|[EG]}{I|L}D{[QG]|[NA]}VK{I|L} 10.224;9.2624;7.358 +;-;- + 415 + 1 1.467 56217.6 1.0 6605 4706 11309 HBL1_DMSO_200M_050219_2,11313 HBL1_DMSO_200M_050219_2,11313,DALDVANKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11314 61.073 34.0 1619100.0 25 0 413860.0 -1 0 58 340.20952759923875 678.4045022652775 2 340.2090942263603 MULTI CID FTMS 0 0 0 11309 1840141.125 0.1474429759947591 4 -0.4440422058105469 5 4 Y 1 -1 2.4743 0.0 0.0 0.36472 0.0 0.0 339.23737077289314 173.08223901920158 512.3196097920948 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.36472 - 1 + 1 1.467 48490.6 1.0 6606 4706 11309 HBL1_DMSO_200M_050219_2,11314 HBL1_DMSO_200M_050219_2,11314, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11315 61.074 32.0 1414800.0 25 0 340780.0 + 38940 TVMDSKIVQV 10 73 560.3073001083503 1118.6000472835003 2 560.3082153201103 MULTI CID FTMS 0 0 0 11309 1451601.625 0.2629070347747412 2 -0.2032127380371093 6 Unmodified _TVMDSKIVQV_ ENSG00000025800|ENST00000373625|KPNA6;ENSG00000114030|ENST00000344337|KPNA1;ENSG00000196911|ENST00000368564|KPNA5 26.268140514670165 0.3785003716575977 4 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VQ 7 4 49.481 0.0 0.0 4.4235 0.0 0.0 0.0 314.1722268091443 314.1722268091443 36.97190098952909 0.0 0.0 0.0 0 0.5 2.0 0.8494850021680094 0.0 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VQ 4.4235 - 247 1 1.467 39910.2 1.0 6607 4706 11309 HBL1_DMSO_200M_050219_2,11315 HBL1_DMSO_200M_050219_2,11315,TVMDSKIVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11316 61.076 46.0 954170.0 25 0 79550.0 + -1 DAIRSLASV 9 80 466.2659961766482 465.2587197100482 1 466.2650024294853 MULTI CID FTMS 0 0 0 11309 1038379.75 0.0843896604395841 9 -0.9163932800292968 7 ENSG00000107625|ENST00000373585|DDX50 4 [YK]GV 4 -1 + 20.177 0.0 0.0 4.3368 4.3368 76.904 0.0 0.0 0.0 10.607799220937505 9.00972112308456 9.00972112308456 7.84884633042612 0 0.0 0.0 0.0 0.0 [YK]GV;[VG][YK] 4.3368;2.6498 -;- 25 + 1 1.467 41748.6 1.0 6608 4706 11309 HBL1_DMSO_200M_050219_2,11316 HBL1_DMSO_200M_050219_2,11316, False False DAIRSLASV 61.07569 466.265002429485 8402825.0 11309.0 ENSG00000107625|ENST00000373585|DDX50 5.394155343373616 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11317 61.077 74.0 850030.0 25 0 111880.0 41384 VPKTPVEI 8 80 441.7683182352048 881.5220835372097 2 441.7682983279228 MULTI CID FTMS 0 0 0 11309 865523.6875 0.9711423359204976 2 -0.2032127380371093 8 Unmodified _VPKTPVEI_ ENST00000529587.1_1_11:9806704-9806878:-|nuORF 25.399314129420983 0.5099049743284904 4 VP 2 6 45.217 0.0 0.0 5.1294 0.0 0.0 0.0 682.379799259293 682.379799259293 12.240830505375868 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VP 5.1294 + + 316 + 1 1.467 52613.6 1.0 6609 4706 11309 HBL1_DMSO_200M_050219_2,11317 HBL1_DMSO_200M_050219_2,11317,VPKTPVEI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11318 61.079 70.0 909200.0 25 0 108430.0 + 15418 IPPLATHTI 9 83 481.7868532182104 961.5591535032208 2 481.7870056033134 MULTI CID FTMS 0 0 0 11309 605660.0 0.8272270884569649 3 -0.3162269592285156 9 Unmodified _IPPLATHTI_ ENSG00000117335|ENST00000367042|CD46;ENST00000469535.5_1_1:207925470-207933074:+|nuORF;nc|ENSG00000117335|P15529-10|CD46;nc|ENSG00000117335|P15529-12|CD46;nc|ENSG00000117335|P15529-13|CD46;nc|ENSG00000117335|P15529-14|CD46;nc|ENSG00000117335|P15529-15|CD46;nc|ENSG00000117335|P15529-2|CD46;nc|ENSG00000117335|P15529-3|CD46;nc|ENSG00000117335|P15529-4|CD46;nc|ENSG00000117335|P15529-5|CD46;nc|ENSG00000117335|P15529-6|CD46;nc|ENSG00000117335|P15529-7|CD46;nc|ENSG00000117335|P15529-8|CD46;nc|ENSG00000117335|P15529-9|CD46;nc|ENSG00000117335|P15529|CD46 46.020951573049366 0.0490941689151868 4 {I|L}PP{I|L}[TA]HT{I|L} 9 0 + 68.502 0.0 0.0 7.124 7.124 92.105 0.0 0.0 0.0 36.47817481888637 14.293220392716904 14.293220392716904 12.972287753157516 0 0.8494850021680094 2.0 1.174742501084005 0.0 + + {I|L}PP{I|L}[TA]HT{I|L};{I|L}P[H{I|L}]T[PA]T{I|L};{I|L}P[H{I|L}]T[VP]SV;{I|L}P[H{I|L}]T[{I|L}T][PA];[{I|L}P]PA[HT]T{I|L}{I|L};[HT]{I|L}[PA]T{I|L}P{I|L};[HT]{I|L}[PA]TP{I|L}{I|L};[HT]{I|L}[PA]PT{I|L}{I|L} 7.124;5.7749;5.6376;4.306;3.2075;3.077;2.7639;2.0549 +;-;-;-;-;-;-;- + 173 + 1 1.467 54709.4 1.0 6610 4706 11309 HBL1_DMSO_200M_050219_2,11318 HBL1_DMSO_200M_050219_2,11318,IPPLATHTI True True IPPLATHTI 61.079059 481.7875 12628341.0 11309.0 nc|ENSG00000117335|P15529-5|CD46;;nc|ENSG00000117335|P15529-14|CD46;;nc|ENSG00000117335|P15529-7|CD46;;nc|ENSG00000117335|P15529-4|CD46;;nc|ENSG00000117335|P15529-6|CD46;;nc|ENSG00000117335|P15529-15|CD46;;nc|ENSG00000117335|P15529-12|CD46;;ENST00000469535.5_1_1:207925470-207933074:+|nuORF;;nc|ENSG00000117335|P15529|CD46;;nc|ENSG00000117335|P15529-2|CD46;;nc|ENSG00000117335|P15529-9|CD46;;nc|ENSG00000117335|P15529-10|CD46;;nc|ENSG00000117335|P15529-3|CD46;;ENSG00000117335|ENST00000367042|CD46;;nc|ENSG00000117335|P15529-8|CD46;;nc|ENSG00000117335|P15529-13|CD46 4.499801953633626 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11319 61.084 282.0 856640.0 25 0 82580.0 -1 VNREMMCS 8 177 529.7091738099522 1057.4037946867045 2 529.7091552615166 MULTI CID FTMS 0 0 0 11309 354275.3125 0.4892044824430169 3 -0.3162269592285156 10 Carbamidomethyl (C),2 Oxidation (M) _VNREM(Oxidation (M))M(Oxidation (M))C(Carbamidomethyl (C))S_ ENSG00000167202|ENST00000300584|TBC1D2B;ENST00000472786.1_1_15:78295640-78309087:-|nuORF;nc|ENSG00000167202|Q9UPU7-2|TBC1D2B;nc|ENSG00000167202|Q9UPU7-3|TBC1D2B 23.1484247019978 0.5573009939494978 4 VNPDV 5 -1 65.667 0.0 0.0 6.2102 0.0 0.0 0.0 530.1221407525999 530.1221407525999 51.35299224507771 0.0 0.0 0.0 0 0.805462187404089 2.0 0.6382104921644451 0.3807196863200844 VNPDV 6.2102 - 228 + 1 1.467 186276.8 1.0 6611 4706 11309 HBL1_DMSO_200M_050219_2,11319 HBL1_DMSO_200M_050219_2,11319,VNREMMCS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11320 61.088 218.0 345430.0 25 0 31144.0 22124 LPPPVQTQI 9 126 496.7926827535134 991.5708125738269 2 496.7929565310478 MULTI CID FTMS 0 0 0 11309 209682.375 0.0525173109427649 24 -2.2680587768554688 11 Unmodified _LPPPVQTQI_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 42.09456458481378 0.0639583784996157 4 [{I|L}P]PPVYPP{I|L} 9 3 + 54.083 0.0 0.0 5.4543 5.4543 79.364 0.0 0.0 0.0 6.804782212094338 15.228787452803374 6.804782212094338 5.811157458248246 0 0.7742275032520141 1.6989700043360187 0.0 0.0 [{I|L}P]PPVYPP{I|L};[{I|L}P]PN[QT]{I|L}P{I|L};[{I|L}P]PPVQ[QT]{I|L};[VP]PP{I|L}YPP{I|L};[{I|L}P]PNP{I|L}[QT]{I|L};[{I|L}P]PNPK[DV]{I|L};[{I|L}P]PPN{I|L}[QT]{I|L};[VP]PP{I|L}Q[QT]{I|L};[VP]PPYP{I|L}P{I|L};[{I|L}P]PPNK[DV]{I|L} 5.4543;4.8682;4.7776;4.768;4.6675;4.364;4.2964;4.0914;4.0417;3.9928 -;-;+;-;-;-;-;-;-;- + 907 1 1.467 60089.7 1.0 6612 4706 11309 HBL1_DMSO_200M_050219_2,11320 HBL1_DMSO_200M_050219_2,11320,LPPPVQTQI True True SQMPVPVHV 61.088372 496.792956531048 4784998.5 11309.0 ENSG00000160218|ENST00000291574|TRAPPC10 3.251373211542765 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11321 61.093 267.0 304430.0 25 0 34355.0 + 27056 PERGHTKAEI 10 104 379.8732872133636 1136.5980322402909 3 379.8737670779228 MULTI CID FTMS 0 0 0 11309 186360.921875 0.0325494226418399 5 -0.5458030700683594 12 Unmodified _PERGHTKAEI_ REV__ENSG00000177103|ENST00000651296|DSCAML1;REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1 10.073929032068715 0.6785112666868882 4 [TP]{I|L}[EP]{I|L}EPE{I|L} 10 -1 + 34.085 0.0 0.0 2.9989 2.9989 77.441 0.0 0.0 0.0 4.259687322722812 18.6008406144498 4.259687322722812 13.789850105233295 0 0.3182503180159344 0.0 0.4247425010840047 0.0 [TP]{I|L}[EP]{I|L}EPE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[RP]{I|L}EPE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{M(Oxidation (M))|F}[RP][{M(Oxidation (M))|F}T]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}P[RP][{M(Oxidation (M))|F}T]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{M(Oxidation (M))|F}[HA]V{[HG]|PP}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{M(Oxidation (M))|F}[HA][RH]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}P[HA]V{[HG]|PP}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}P[HA][RH]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{M(Oxidation (M))|F}[RD][KS]K;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}P[RD][KS]K 2.9989;1.7856;1.7469;1.4821;0.93567;0.89067;0.67082;0.62582;0.55063;0.28578 -;-;-;-;-;-;-;-;-;- 175 1 1.467 69971.0 1.0 6613 4706 11309 HBL1_DMSO_200M_050219_2,11321 HBL1_DMSO_200M_050219_2,11321,PERGHTKAEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11322 61.107 800.0 213210.0 25 0 78335.0 -1 CSDTFSNEV 9 57 1058.411255223039 1057.403978756439 1 1058.412890613079 MULTI CID FTMS 0 0 0 11309 154548.140625 0.4262920344164967 3 -0.3162269592285156 13 Carbamidomethyl (C) _C(Carbamidomethyl (C))SDTFSNEV_ ENSG00000177174|ENST00000317861|OR14C36 10.073929032068715 0.563993802247229 4 VEV 3 -1 28.5 0.0 0.0 2.6953 0.0 0.0 712.203905174025 0.0 712.203905174025 0.0 9.527712246842484 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 VEV 2.6953 - 28 1 1.467 113786.3 0.699999988079071 6614 4706 11309 HBL1_DMSO_200M_050219_2,11322 HBL1_DMSO_200M_050219_2,11322,CSDTFSNEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11323 61.121 800.0 327540.0 25 0 25439.0 + + -1 ILHENFTTV 9 226 537.2870129302939 0 537.2864868044853 PEAK CID FTMS 0 0 0 11309 129782.59375 1.0 0 0.0 14 Carbamidomethyl (C) _PAC(Carbamidomethyl (C))LLAQTSL_ nc|ENSG00000135720|O43237-2|DYNC1LI2;ENSG00000135720|ENST00000258198|DYNC1LI2;ENST00000565532.5_1_16:66762088-66770076:-|nuORF 29.081581746732265 0.2251250799338715 4 V{I|L}DDH 5 -1 22.524 0.0 0.0 2.1 0.0 0.0 130.05680066351903 360.2038973443969 490.260698007916 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 V{I|L}DDH 2.1 - 901 + 1 1.467 208246.9 0.7799999713897705 6615 4706 11309 HBL1_DMSO_200M_050219_2,11323 HBL1_DMSO_200M_050219_2,11323,PACLLAQTSL False False ILHENFTTV 61.121005 537.286486804485 557201.5625 11309.0 nc|ENSG00000135720|O43237-2|DYNC1LI2;;ENSG00000135720|ENST00000258198|DYNC1LI2;;ENST00000565532.5_1_16:66762088-66770076:-|nuORF 2.9065730571746826 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11324 61.135 800.0 302940.0 25 0 22282.0 + -1 VPMRPGILV 9 240 499.2968462476724 996.5791395621447 2 499.2968322634697 MULTI CID FTMS 0 0 0 11309 119332.9453125 0.8282668340846937 2 -0.2032127380371093 15 Oxidation (M) _VPM(Oxidation (M))RPGILV_ ENSG00000237651|ENST00000432605|C2orf74 32.30548876998284 0.1201446275138228 4 VTA{I|L}{I|L}VGEPV 10 -1 + 39.999 0.0 0.0 4.0137 4.0137 64.726 0.0 0.0 0.0 12.77511992432699 0.4684849866448388 0.4684849866448388 0.4684849866448388 0 0.839512552733964 0.8239087409443188 0.2887254899964357 0.0 VTA{I|L}{I|L}VGEPV;[{I|L}T]EGV[PA]V{I|L}V;VPSE{I|L}{I|L}Q{I|L}V;[{I|L}T]EGV[PA]{I|L}VV;VP{[RE]|[WV]}WV{I|L}V;VPSE{I|L}{I|L}QV{I|L};VP{[RE]|[WV]}WVV{I|L};[TA]VEV[PA]V{I|L}V;VTA{I|L}{I|L}VGDP{I|L};{[QN]|[E{I|L}]|[KN]}TGV[PA]V{I|L}V 4.0137;3.9667;3.8611;3.767;3.7596;3.6967;3.5953;3.4526;3.4219;3.4137 -;-;-;-;-;-;-;-;-;- 2058 + 1 1.467 182125.0 0.6899999976158142 6616 4706 11309 HBL1_DMSO_200M_050219_2,11324 HBL1_DMSO_200M_050219_2,11324,VPMRPGILV False False VPMRPGILV 61.134819 499.29683226347 2372713.25 11309.0 ENSG00000237651|ENST00000432605|C2orf74 5.211865266164144 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11325 61.149 800.0 138670.0 25 0 11034.0 -1 0 134 604.300081503733 1809.8784151113991 3 604.2944824099541 MULTI CID FTMS 0 0 0 -1 0 16 4 [H{I|L}][DP]{I|L}WG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L} 10 -1 31.239 0.0 0.0 1.726 0.0 0.0 0.0 600.2395267231437 600.2395267231437 1.813929935651668 0.0 0.0 0.0 0 0.6382104921644451 1.6989700043360187 0.0 0.3252574989159953 [H{I|L}][DP]{I|L}WG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L} 1.726 - 2412 1 1.467 86385.6 0.7699999809265137 6617 4706 11309 HBL1_DMSO_200M_050219_2,11325 HBL1_DMSO_200M_050219_2,11325, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11326 61.154 227.0 326060.0 25 0 25285.0 -1 IPCVPKDL 8 119 471.2587336474024 0 471.2583801150322 PEAK CID FTMS 0 0 0 11309 115487.359375 1.0 0 0.0 17 Carbamidomethyl (C) _IPC(Carbamidomethyl (C))VPKDL_ ENSG00000144357|ENST00000272793|UBR3;nc|ENSG00000144357|Q6ZT12-4|UBR3 18.13498045792455 0.4501116112875982 4 PD 2 -1 10.445 0.0 0.0 1.1106 0.0 0.0 657.3494371450681 68.05132471256093 725.400761857629 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1861818737241735 0.0 PD 1.1106 - 159 + 1 1.467 60968.6 1.0 6618 4706 11309 HBL1_DMSO_200M_050219_2,11326 HBL1_DMSO_200M_050219_2,11326,IPCVPKDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11327 61.168 800.0 77609.0 25 0 13716.0 -1 0 59 1148.1339772265171 3441.3801022797525 3 1149.137377917767 MULTI CID FTMS 0 0 0 11309 96657.53125 0.8534072446499621 -1 0.0935707092285156 18 4 Y 1 -1 5.4846 0.0 0.0 0.15937 0.0 0.0 3005.234394127212 270.06222124099463 3275.2966153682064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.15937 - 20 + 1 1.467 54239.3 0.4300000071525574 6619 4706 11309 HBL1_DMSO_200M_050219_2,11327 HBL1_DMSO_200M_050219_2,11327, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11329 61.173 83.0 819480.0 25 0 66434.0 + 2977 AVIEHLERL 9 89 360.54511470779664 1078.61351472359 3 360.5449096560478 MULTI CID FTMS 0 0 0 11328 556695.1875 0.5039464225276952 2 -0.2121009826660156 1 Unmodified _AVIEHLERL_ ENSG00000257218|ENST00000551765|GATC 24.99096001346401 0.2132109383330889 4 {[VA]|[{I|L}G]}{I|L}EH{I|L}ER{I|L} 9 0 + 63.636 0.0 0.0 5.8998 5.8998 77.255 0.0 0.0 0.0 43.17873219674858 4.252057161061273 4.252057161061273 3.0102999566398125 0 0.3252574989159953 2.0 0.4247425010840047 0.3494850021680094 + + {[VA]|[{I|L}G]}{I|L}EH{I|L}ER{I|L};{[VA]|[{I|L}G]}{I|L}E{I|L}HER{I|L};{[VA]|[{I|L}G]}{I|L}E{I|L}{[HG]|PP}{NN|[MP]|[D{I|L}]|[EV]}{I|L} 5.8998;5.6207;4.5454 +;-;- + 119 + 1 1.468 62656.9 1.0 6620 4707 11328 HBL1_DMSO_200M_050219_2,11329 HBL1_DMSO_200M_050219_2,11329,AVIEHLERL False True AVIEHLERL 61.173113 360.544909656048 28482953.0 11328.0 ENSG00000257218|ENST00000551765|GATC 4.849457422892253 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11330 61.175 71.0 1053700.0 25 0 171840.0 + -1 TIVEMLHKA 9 109 519.791170775148 1037.567788617096 2 521.2918578982353 MULTI CID FTMS 0 0 0 11328 811338.9375 0.9261761558042798 1 -0.0990867614746093 2 Oxidation (M) _ELFKM(Oxidation (M))RAK_ nc|ENSG00000156970|O60566-3|BUB1B;ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B 16.942295170755138 0.6606234159769251 4 [{I|L}T][RP]MEV 7 -1 40.278 0.0 0.0 3.8819 0.0 0.0 0.0 208.10673438316653 208.10673438316653 22.37289166585199 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.3494850021680094 [{I|L}T][RP]MEV 3.8819 - 381 1 1.468 68314.0 1.0 6621 4707 11328 HBL1_DMSO_200M_050219_2,11330 HBL1_DMSO_200M_050219_2,11330,ELFKMRAK False False TIVEMLHKA 61.174809 521.291857898235 8409154.0 11328.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B;;nc|ENSG00000156970|O60566-2|BUB1B 5.800374666849772 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11331 61.176 12.0 5635600.0 25 0 394470.0 + 5899 DPYKVYRIV 9 85 384.8853134716828 1151.6341110152484 3 384.8851806521416 MULTI CID FTMS 0 0 0 11328 3758998.5 0.242328704352545 -2 0.1976966857910156 3 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 30.63653989081413 0.1413794767160703 4 DPYKVYR{I|L}V 9 0 + 73.999 0.0 0.0 6.4256 6.4256 92.949 0.0 0.0 0.0 60.9000935871122 9.37580271024207 9.37580271024207 73.99903737855416 0 0.2887254899964357 1.6989700043360187 0.0 0.0 + + DPYKVYR{I|L}V 6.4256 + + 74 + 1 1.468 64689.1 1.0 6622 4707 11328 HBL1_DMSO_200M_050219_2,11331 HBL1_DMSO_200M_050219_2,11331,DPYKVYRIV False True DPYKVYRIV 61.175988 384.885180652142 821196136.0 11328.0 nc|ENSG00000137265|Q15306-2|IRF4;;ENSG00000137265|ENST00000380956|IRF4;;chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;;ENST00000495137.5_1_6:394829-397293:+|nuORF 7.602540334065755 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11332 61.177 25.0 3169500.0 25 0 255360.0 + 5903 DPYKVYRIV 9 76 576.8241678675307 1151.6337828018611 2 576.8245117068291 MULTI CID FTMS 0 0 0 11328 2278293.5 0.2467754887973162 -2 0.1976966857910156 4 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 43.77239144664712 0.0547478964384323 4 DPYKVY 6 3 70.367 0.0 0.0 6.1102 0.0 0.0 0.0 383.2419222467407 383.2419222467407 42.03402196076127 0.0 0.0 0.0 0 1.4476212463643423 1.5228787452803376 0.0 0.0 + DPYKVY 6.1102 + + 152 + 1 1.468 64154.0 1.0 6623 4707 11328 HBL1_DMSO_200M_050219_2,11332 HBL1_DMSO_200M_050219_2,11332,DPYKVYRIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11333 61.178 40.0 1649300.0 25 0 127770.0 + 24901 MPNTRPPII 9 80 519.791170775148 1037.567788617096 2 519.7925903201103 MULTI CID FTMS 0 0 0 11328 1228643.25 0.1829127252962252 -3 0.2943992614746094 5 Unmodified _MPNTRPPII_ ENSG00000084774|ENST00000264705|CAD 38.17557092003332 0.0854718145212029 4 MPNTR 5 4 67.251 0.0 0.0 6.4816 0.0 0.0 0.0 435.2620254221184 435.2620254221184 39.62598448311063 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.4247425010840047 + MPNTR 6.4816 + + 125 + 1 1.468 57871.1 1.0 6624 4707 11328 HBL1_DMSO_200M_050219_2,11333 HBL1_DMSO_200M_050219_2,11333,MPNTRPPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11334 61.18 63.0 1342100.0 25 0 160850.0 + 5225 DIYKIREI 8 79 525.3027503906801 1048.59094784816 2 525.3035766482353 MULTI CID FTMS 0 0 0 11328 923635.625 0.2056956352049778 -2 0.1976966857910156 6 Unmodified _DIYKIREI_ ENSG00000133112|ENST00000530705|TPT1;ENST00000442760.2_1_13:45914489-45915204:-|nuORF 19.361941925380144 0.6248778452073445 4 {I|L}DYK{I|L}[W{I|L}]V 8 5 + 68.475 0.0 0.0 6.5302 6.5302 76.56 0.0 0.0 0.0 3.0102999566398125 1.346985738974567 1.346985738974567 1.346985738974567 0 0.7742275032520141 2.0 0.0 0.0 {I|L}DYK{I|L}[W{I|L}]V;{I|L}DYK{I|L}{[RE]|[WV]}{I|L};D{I|L}YK{I|L}[W{I|L}]V;D{I|L}YK{I|L}{[RE]|[WV]}{I|L};{I|L}DY{I|L}K[W{I|L}]V;{I|L}DY{I|L}K{[RE]|[WV]}{I|L};{I|L}D{I|L}YK[W{I|L}]V;D{I|L}Y{I|L}K[W{I|L}]V;{I|L}D{I|L}YK{[RE]|[WV]}{I|L};D{I|L}Y{I|L}K{[RE]|[WV]}{I|L} 6.5302;6.4017;6.2431;6.1146;6.0752;5.9467;5.7881;5.7881;5.6596;5.6596 -;-;-;+;-;-;-;-;-;- + 170 + 1 1.468 70814.5 1.0 6625 4707 11328 HBL1_DMSO_200M_050219_2,11334 HBL1_DMSO_200M_050219_2,11334,DIYKIREI False True DIYKIREI 61.179886 525.303576648235 74553902.0 11328.0 ENSG00000133112|ENST00000530705|TPT1;;ENST00000442760.2_1_13:45914489-45915204:-|nuORF 1.6748486856619518 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11335 61.182 84.0 710440.0 25 0 124220.0 + -1 VITEKGISDL 10 80 537.8057918725032 1073.5970308118062 2 537.8062011599541 MULTI CID FTMS 0 0 0 11328 676030.5625 0.2290515795924607 -2 0.1976966857910156 7 Carbamidomethyl (C) _VIC(Carbamidomethyl (C))LLWALS_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 23.1484247019978 0.2366544122328345 4 V{I|L}[{M(Oxidation (M))|F}V]S{I|L}GK 8 -1 61.631 0.0 0.0 5.7406 0.0 0.0 0.0 227.06667505435783 227.06667505435783 46.68243764792422 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 V{I|L}[{M(Oxidation (M))|F}V]S{I|L}GK 5.7406 - 452 + 1 1.468 53649.9 1.0 6626 4707 11328 HBL1_DMSO_200M_050219_2,11335 HBL1_DMSO_200M_050219_2,11335,VICLLWALS False False VITEKGISDL 61.181786 537.806201159954 22776368.0 11328.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 3.87371571858724 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11336 61.183 68.0 771040.0 25 0 71395.0 + 24231 MALIQHSTI 9 94 507.2760231616633 1012.5374933901268 2 507.2763854861259 MULTI CID FTMS 0 0 0 11328 659687.625 0.7458413435006105 -1 0.1041259765625 8 Unmodified _MALIQHSTI_ ENSG00000056736|ENST00000288167|IL17RB;ENST00000475124.1_1_3:53880615-53891834:+|nuORF;nc|ENSG00000056736|Q9NRM6-2|IL17RB 65.23502041540118 0.0231836506122253 4 MA{I|L}{I|L}Q[HS]T{I|L} 9 0 + 80.913 0.0 0.0 7.9911 7.9911 94.192 0.0 0.0 0.0 60.132965752203226 8.898696175932798 8.898696175932798 13.015384402724592 0 1.0 1.6989700043360187 1.3494850021680094 0.3807196863200844 + + MA{I|L}{I|L}Q[HS]T{I|L};MA{I|L}{I|L}[AG][HS]T{I|L};{I|L}{I|L}DDQ{I|L}{I|L}[PS];MA{I|L}HK{[CP]|[EA]}T{I|L};{I|L}{I|L}DD[AG]{I|L}{I|L}[PS];[H{I|L}]Q[YR]{I|L}[PS];[HQ][YR]{I|L}{I|L}[PS];[HQ]{I|L}[YR]{I|L}[PS];[H{I|L}][AG][YR]{I|L}[PS];[H{I|L}]Q{I|L}[YR][PS] 7.9911;6.7056;5.4566;5.3959;4.1712;3.1863;2.4379;2.3592;2.2715;2.0979 +;-;-;-;-;-;-;-;-;- + 333 + 1 1.468 45257.9 1.0 6627 4707 11328 HBL1_DMSO_200M_050219_2,11336 HBL1_DMSO_200M_050219_2,11336,MALIQHSTI True True MALIQHSTI 61.183396 507.276385486126 6690625.0 11328.0 ENST00000475124.1_1_3:53880615-53891834:+|nuORF;;nc|ENSG00000056736|Q9NRM6-2|IL17RB;;ENSG00000056736|ENST00000288167|IL17RB 6.670896689097087 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11337 61.185 84.0 598970.0 25 0 105240.0 27217 PGLAARER 8 88 435.25113249996593 868.4877120667319 2 435.2513610720634 MULTI CID FTMS 0 0 0 11328 622446.875 1.0 0 0.0 9 Unmodified _PGLAARER_ ENST00000570099.5_1_16:30103880-30104012:-|nuORF 3.5964929083625545 0.8025018637788065 4 AA 2 6 8.5835 0.0 0.0 0.98833 0.0 0.0 267.1529475177069 456.2375582330688 723.3905057507757 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + AA 0.98833 + + 9 + 1 1.468 45455.7 1.0 6628 4707 11328 HBL1_DMSO_200M_050219_2,11337 HBL1_DMSO_200M_050219_2,11337,PGLAARER False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11338 61.188 105.0 798750.0 25 0 72318.0 + 22635 LPYPIHQV 8 104 483.7744182518194 965.5342835704388 2 483.7741882205009 MULTI CID FTMS 0 0 0 11328 574251.9375 0.3053681465139991 -5 0.4430580139160156 10 Unmodified _LPYPIHQV_ ENSG00000176444|ENST00000368361|CLK2;ENST00000416636.2_1_7:23624683-23625604:-|nuORF;ENST00000497188.1_1_1:155234069-155238352:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2 74.39630413441286 0.1057069479668299 4 {I|L}PYP{I|L}HQV 8 0 + 70.25 0.0 0.0 7.2758 7.2758 93.125 0.0 0.0 0.0 43.59463981984403 11.330605138445392 11.330605138445392 15.64424278003527 0 1.2544321917401078 1.6989700043360187 0.0 0.6382104921644451 + + {I|L}PYP{I|L}HQV;{I|L}PYP{I|L}H[AG]V;{I|L}P{[RE]|[WV]}PQQV;{I|L}P{[RE]|[WV]}P{I|L}{[QN]|[E{I|L}]|[KN]};{I|L}P{[RE]|[WV]}P[AG]QV;{I|L}P[H{I|L}]{M(Oxidation (M))|F}{I|L}QV;{I|L}P{[RE]|[WV]}PQ[AG]V;{I|L}PYV[HA][PA]V;{I|L}[{I|L}T]QQHQV;{I|L}P[H{I|L}]V{[DS]|[MA]|[CV]|TT}SV 7.2758;5.6555;4.7544;4.4872;3.7952;3.6124;3.4961;3.4797;2.6871;2.4394 +;-;-;-;-;-;-;-;-;- + 735 + 1 1.468 69196.7 1.0 6629 4707 11328 HBL1_DMSO_200M_050219_2,11338 HBL1_DMSO_200M_050219_2,11338,LPYPIHQV True True LPYPIHQV 61.187519 483.774188220501 90796188.0 11328.0 ENSG00000176444|ENST00000368361|CLK2;;ENST00000497188.1_1_1:155234069-155238352:-|nuORF;;ENST00000416636.2_1_7:23624683-23625604:-|nuORF;;nc|ENSG00000176444|P49760-3|CLK2 7.301504611968994 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11339 61.192 267.0 561820.0 25 0 52306.0 + -1 YYDPECQKRC 10 112 709.7935658312407 1417.5725787292813 2 709.7938720583916 MULTI CID FTMS 0 0 0 11328 391337.90625 1.0 0 0.0 11 2 Carbamidomethyl (C) _YYDPEC(Carbamidomethyl (C))QKRC(Carbamidomethyl (C))_ REV__ENSG00000120949|ENST00000263932|TNFRSF8;REV__ENSG00000120949|ENST00000263932|TNFRSF8;REV__nc|ENSG00000120949|P28908-3|TNFRSF8 13.90604991867851 0.6142120002215601 4 YY{I|L}TNDPP[DG]T 11 -1 70.583 0.0 0.0 4.9791 0.0 0.0 0.0 178.05141626529533 178.05141626529533 61.28573252376685 0.0 0.0 0.0 0 1.589136830878453 2.0 0.6307196863200843 0.3494850021680094 YY{I|L}TNDPP[DG]T 4.9791 - 1651 + 1 1.468 108026.4 1.0 6630 4707 11328 HBL1_DMSO_200M_050219_2,11339 HBL1_DMSO_200M_050219_2,11339,YYDPECQKRC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11340 61.197 249.0 318390.0 25 0 33383.0 + + -1 TMAKESSIIGV 11 111 568.3052833788017 0 568.3059570193291 PEAK CID FTMS 0 0 0 11328 307685.0 0.1473057255684302 3 -0.3399162292480469 12 Oxidation (M) _LDKM(Oxidation (M))SEKLGV_ nc|ENSG00000116791|Q08257-2|CRYZ;ENSG00000116791|ENST00000340866|CRYZ;nc|ENSG00000116791|Q08257-3|CRYZ 30.63653989081413 0.2106260509139429 4 QE 2 -1 14.099 0.0 0.0 1.2426 0.0 0.0 227.10882006422645 647.3449801080686 874.4538001722951 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.3252574989159953 QE 1.2426 - 116 + 1 1.468 64433.0 1.0 6631 4707 11328 HBL1_DMSO_200M_050219_2,11340 HBL1_DMSO_200M_050219_2,11340,LDKMSEKLGV False False TMAKESSIIGV 61.197119 568.305957019329 16853320.0 11328.0 nc|ENSG00000116791|Q08257-2|CRYZ;;ENSG00000116791|ENST00000340866|CRYZ;;nc|ENSG00000116791|Q08257-3|CRYZ 3.878613630930583 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11341 61.2 138.0 747960.0 25 0 74801.0 + 5226 DIYKIREI 8 98 350.5380235689346 1048.592241307004 3 350.5377685427666 MULTI CID FTMS 0 0 0 11328 298517.25 0.2293592449484336 -2 0.1976966857910156 13 Unmodified _DIYKIREI_ ENSG00000133112|ENST00000530705|TPT1;ENST00000442760.2_1_13:45914489-45915204:-|nuORF 18.1463463914782 0.6428359029697936 4 {NN|[MP]|[D{I|L}]|[EV]}YK{I|L}{[RE]|[WV]}{I|L} 8 0 + 46.273 0.0 0.0 4.4128 4.4128 75.677 0.0 0.0 0.0 35.013531677136775 0.9994821719013204 0.9994821719013204 6.262874945799766 0 0.3054621874040891 2.0 0.3252574989159953 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}YK{I|L}{[RE]|[WV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}K{[RE]|[WV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}YK{[RE]|[WV]}{I|L} 4.4128;3.8156;3.5285 +;-;- + 84 + 1 1.468 88115.2 1.0 6632 4707 11328 HBL1_DMSO_200M_050219_2,11341 HBL1_DMSO_200M_050219_2,11341,DIYKIREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11342 61.212 706.0 215130.0 25 0 14693.0 + -1 PDYPCRAMGSI 11 171 633.783662574037 1265.5527722148738 2 633.7855102419853 MULTI CID FTMS 0 0 0 11328 283380.34375 0.1981511153896882 4 -0.4416770935058594 14 Carbamidomethyl (C) _PDYPC(Carbamidomethyl (C))RAMGSI_ REV__ENSG00000167680|ENST00000586582|SEMA6B;REV__nc|ENSG00000167680|Q9H3T3-3|SEMA6B 23.78978130925829 0.5336113198261219 4 DPYGNRD[WM]{I|L} 10 -1 + 92.361 0.0 0.0 7.2981 7.2981 89.54 0.0 0.0 0.0 60.44969654730343 5.228787452803374 5.228787452803374 9.164539485499262 0 1.6382104921644451 1.6989700043360187 0.0 0.805462187404089 DPYGNRD[WM]{I|L};DPYGGGRD[WM]{I|L};DPYGN[VG]D[KS]QS;DPYGNSW[HK]Y;DPYGNS[PS][KS]QS;DPYGNS{[QG]|[NA]}[C(Carbamidomethyl (C))R]{I|L};DPYGGGSW[HK]Y;DPYGN[VG]D[Y{I|L}][PG];DPYGNS[VS]{[NV]|[RG]}QS;DPYGN[VG]D[YV][PA] 7.2981;6.5739;6.34;5.9737;5.2772;5.2732;5.2495;5.1149;4.9002;4.8594 -;-;-;-;-;-;-;-;-;- 2574 + 1 1.468 119002.8 1.0 6633 4707 11328 HBL1_DMSO_200M_050219_2,11342 HBL1_DMSO_200M_050219_2,11342,PDYPCRAMGSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11343 61.226 800.0 153800.0 25 0 39469.0 -1 0 56 1160.4932604480591 3478.457951944378 3 1160.830004870892 MULTI CID FTMS 0 0 0 11328 237263.015625 1.0 0 0.0 15 4 C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 4 -1 12.652 0.0 0.0 0.36371 0.0 0.0 1312.4616120384403 1532.7951143854127 2845.2567264238533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 0.36371 - 31 + 1 1.468 103038.6 0.800000011920929 6634 4707 11328 HBL1_DMSO_200M_050219_2,11343 HBL1_DMSO_200M_050219_2,11343, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11344 61.23 191.0 288120.0 25 0 19984.0 + 21148 LPARVAEQPV 10 91 540.3133751508701 1078.61219736854 2 540.8137084841728 MULTI CID FTMS 0 0 0 11328 237772.71875 0.5964087053555331 2 -0.2121009826660156 16 Unmodified _LPARVAEQPV_ REV__ENST00000524376.1_1_11:121962418-121971135:-|nuORF;REV__ENST00000528986.1_1_11:121962442-121971135:-|nuORF 10.823927491677226 0.6659270209832991 4 {[VA]|[{I|L}G]}{I|L}EH{I|L}[PA]{I|L} 9 -1 32.853 0.0 0.0 3.0459 0.0 0.0 0.0 132.0458162897094 132.0458162897094 20.86365002801444 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}{I|L}EH{I|L}[PA]{I|L} 3.0459 - 194 + 1 1.468 50140.6 1.0 6635 4707 11328 HBL1_DMSO_200M_050219_2,11344 HBL1_DMSO_200M_050219_2,11344,LPARVAEQPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11345 61.244 800.0 113850.0 25 0 9001.8 + -1 CRHMASTMCTY 11 125 717.2763603156388 1432.5381676980776 2 717.7792846560478 MULTI CID FTMS 0 0 0 11328 212754.296875 0.9775832398978584 -1 0.1041259765625 17 2 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))RHM(Oxidation (M))ASTMC(Carbamidomethyl (C))TY_ REV__ENST00000481254.1_1_9:35074849-35075035:-|nuORF 5.731851221503515 0.8481046878870278 4 DTVQ[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 6 -1 23.689 0.0 0.0 1.6537 0.0 0.0 664.2001209943375 0.0 664.2001209943375 0.0 1.9025296730338148 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 DTVQ[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 1.6537 - 738 1 1.468 69572.0 0.9700000286102296 6636 4707 11328 HBL1_DMSO_200M_050219_2,11345 HBL1_DMSO_200M_050219_2,11345,CRHMASTMCTY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11346 61.251 324.0 282640.0 25 0 20033.0 + 36683 TCPPPQLAV 9 147 463.2439688314429 924.4733847296858 2 463.2440063357353 MULTI CID FTMS 0 0 0 11328 199381.015625 0.9856329028322728 1 -0.0990867614746093 18 Unmodified _TCPPPQLAV_ ENSG00000187912|ENST00000417570|CLEC17A;nc|ENSG00000187912|Q6ZS10-2|CLEC17A;nc|ENSG00000187912|Q6ZS10-3|CLEC17A 32.30548876998284 0.1201446275138228 4 A{I|L}[KC]AV 6 7 22.382 0.0 0.0 2.4211 0.0 0.0 321.1344697900358 0.0 321.1344697900358 0.0 12.778193816289232 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 A{I|L}[KC]AV 2.4211 - 437 + 1 1.468 75051.6 1.0 6637 4707 11328 HBL1_DMSO_200M_050219_2,11346 HBL1_DMSO_200M_050219_2,11346,TCPPPQLAV True True TCPPPQLAV 61.2509 463.244006335735 8392814.0 11328.0 ENSG00000187912|ENST00000417570|CLEC17A;;nc|ENSG00000187912|Q6ZS10-2|CLEC17A;;nc|ENSG00000187912|Q6ZS10-3|CLEC17A 5.492722988128662 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11347 61.265 800.0 227330.0 25 0 26069.0 + 40640 VLDLHDNQL 9 223 533.7794090578251 1065.54426518245 2 533.7798950076103 MULTI CID FTMS 0 0 0 11328 189098.5625 0.9232372411395092 -1 0.1041259765625 19 Unmodified _VLDLHDNQL_ ENSG00000148356|ENST00000300417|LRSAM1;nc|ENSG00000148356|Q6UWE0-2|LRSAM1 82.5293158979368 0.0169039238599547 4 V{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}D{M(Oxidation (M))|F}S{I|L} 9 4 + 65.337 0.0 0.0 6.1318 6.1318 74.923 0.0 0.0 0.0 10.49382619787034 9.259687322722812 9.259687322722812 1.2763625255165325 0 0.9247425010840048 2.0 0.9749073637206092 0.0 V{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}D{M(Oxidation (M))|F}S{I|L};V{I|L}D{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}S{I|L};V{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}D{M(Oxidation (M))|F}TV;{NN|[MP]|[D{I|L}]|[EV]}HDQN{I|L}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}HDNQ{I|L}V{I|L};V{I|L}D{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TV;{NN|[MP]|[D{I|L}]|[EV]}HDQNV{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}HDNQV{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}HDQVVQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}HDN{I|L}VQ{I|L} 6.1318;6.012;5.2628;5.147;5.147;5.143;4.9273;4.9273;4.6017;4.6017 -;-;-;-;-;-;-;-;-;- 12173 + 1 1.468 152101.5 0.8399999737739563 6638 4707 11328 HBL1_DMSO_200M_050219_2,11347 HBL1_DMSO_200M_050219_2,11347,VLDLHDNQL True True VLDIHDNQL 61.264733 533.77989500761 1419845.25 11328.0 ENSG00000066557|ENST00000370952|LRRC40 4.523464361826579 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11348 61.267 133.0 528980.0 25 0 36706.0 + 11252 GESKVVTVPS 10 129 501.7790566090383 0 501.7776061892509 PEAK CID FTMS 0 0 0 11328 157522.640625 1.0 0 0.0 20 Unmodified _GESKVVTVPS_ REV__ENSG00000151117|ENST00000280734|TMEM86A 15.248480904072842 0.3349989633518451 4 ST{I|L}{I|L}RSS 7 -1 25.938 0.0 0.0 2.5898 0.0 0.0 186.05657405616407 68.05136285953358 254.1079369156977 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3778623208748889 0.0 ST{I|L}{I|L}RSS 2.5898 - 168 + 1 1.468 59459.0 1.0 6639 4707 11328 HBL1_DMSO_200M_050219_2,11348 HBL1_DMSO_200M_050219_2,11348,GESKVVTVPS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11350 61.272 3.9 11785000.0 25 0 2026100.0 -1 ELTCPICMN 9 64 548.7264304816301 1095.4383080300602 2 548.7275878787041 MULTI CID FTMS 0 0 0 11349 14296124.0 1.0 0 0.0 1 Carbamidomethyl (C),Oxidation (M) _ELTC(Carbamidomethyl (C))PICM(Oxidation (M))N_ ENSG00000150244|ENST00000417545|TRIM48 7.910154910731844 0.6385446671287552 4 {[QG]|[NA]}{I|L}E 4 -1 31.727 0.0 0.0 2.8963 0.0 0.0 0.0 665.2088518135164 665.2088518135164 7.941453415473205 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3054621874040891 {[QG]|[NA]}{I|L}E 2.8963 - 50 1 1.468 41045.5 1.0 6640 4708 11349 HBL1_DMSO_200M_050219_2,11350 HBL1_DMSO_200M_050219_2,11350,ELTCPICMN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11351 61.273 4.7 8734400.0 25 0 881170.0 + 45771 YYITNDTVQTY 11 63 690.8190431786885 1379.623533424177 2 690.8201782107353 MULTI CID FTMS 0 0 0 11349 11822221.0 1.0 0 0.0 2 Unmodified _YYITNDTVQTY_ ENSG00000144028|ENST00000323853|SNRNP200 43.77239144664712 0.1542841003880809 4 T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VMTY 7 6 31.999 0.0 0.0 2.3194 0.0 0.0 509.2477532501519 0.0 509.2477532501519 0.0 16.980844613864647 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VMTY 2.3194 - 290 + 1 1.468 36912.0 1.0 6641 4708 11349 HBL1_DMSO_200M_050219_2,11351 HBL1_DMSO_200M_050219_2,11351,YYITNDTVQTY False True YYITNDTVQTY 61.272925 690.820178210735 419556000.0 11349.0 ENSG00000144028|ENST00000323853|SNRNP200 8.304563522338867 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11352 61.274 21.0 2485100.0 25 0 215570.0 1880 ALVVQVAEA 9 86 450.26252117876646 898.510489424333 2 450.2623168826103 MULTI CID FTMS 0 0 0 11349 1976498.375 1.0 0 0.0 3 Unmodified _ALVVQVAEA_ ENSG00000049860|ENST00000261416|HEXB;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENST00000515528.1_1_5:73981085-73985366:+|nuORF 46.92087301778293 0.0471210510596396 4 {[VA]|[{I|L}G]}{I|L}VQV[RD] 8 5 + 45.596 0.0 0.0 5.0746 5.0746 73.78 0.0 0.0 0.0 3.0102999566398125 4.6040937697618745 3.0102999566398125 3.0102999566398125 0 0.0 2.0 0.0 0.2742275032520141 {[VA]|[{I|L}G]}{I|L}VQV[RD];{[VA]|[{I|L}G]}{I|L}N{I|L}V[RD];[{I|L}A]VVQV[RD];{[VA]|[{I|L}G]}{I|L}QVV[RD];{[VA]|[{I|L}G]}{I|L}VAGV[RD];[{I|L}A]VN{I|L}V[RD];{[VA]|[{I|L}G]}GVA{I|L}V[RD];{[VA]|[{I|L}G]}QV{I|L}V[RD];[{I|L}A]VQVV[RD];{[VA]|[{I|L}G]}{I|L}AGVV[RD] 5.0746;4.7395;4.7395;4.5436;4.4283;4.4045;4.2893;4.2085;4.2085;4.1814 -;-;-;-;-;-;-;-;-;- 719 1 1.468 48997.5 1.0 6642 4708 11349 HBL1_DMSO_200M_050219_2,11352 HBL1_DMSO_200M_050219_2,11352,ALVVQVAEA True True LAVVAGVAAE 61.274102 450.26231688261 11029587.0 11349.0 ENSG00000182544|ENST00000329548|MFSD5;;nc|ENSG00000182544|Q6N075-2|MFSD5 0.148815835515658 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11353 61.275 37.0 1372900.0 25 0 163700.0 -1 NALVCDCDLM 10 90 556.7239025363675 1111.433252139535 2 556.7244140505791 MULTI CID FTMS 0 0 0 11349 1362583.5 1.0 0 0.0 4 Oxidation (M) _NALVCDCDLM(Oxidation (M))_ ENSG00000147485|ENST00000356297|PXDNL;nc|ENSG00000147485|A1KZ92-2|PXDNL 6.723162845929126 0.6955379296933136 4 {[QG]|[NA]}{I|L} 3 -1 30.7 0.0 0.0 2.7622 0.0 0.0 0.0 810.2459101808037 810.2459101808037 11.838162265355404 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3252574989159953 {[QG]|[NA]}{I|L} 2.7622 + + 73 1 1.468 44377.5 1.0 6643 4708 11349 HBL1_DMSO_200M_050219_2,11353 HBL1_DMSO_200M_050219_2,11353,NALVCDCDLM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11354 61.276 43.0 1023000.0 25 0 70745.0 + 2023 APFQSMQTV 9 86 504.7444425330977 1007.4743321329954 2 504.7446166872978 MULTI CID FTMS 0 0 0 11349 1187806.375 0.9437327775949284 1 -0.1130142211914062 5 Unmodified _APFQSMQTV_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 52.268347100219714 0.0353964759249114 4 [PA]{M(Oxidation (M))|F}GSAMQ{[TV]|[{I|L}S]} 10 2 + 64.9 0.0 0.0 6.4418 6.4418 78.473 0.0 0.0 0.0 2.614393726401687 7.269987279362624 2.614393726401687 2.614393726401687 0 0.5 1.5228787452803376 0.8807196863200843 0.0 [PA]{M(Oxidation (M))|F}GSAMQ{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AGSAMQ{[TV]|[{I|L}S]};[PA]{M(Oxidation (M))|F}GASMQ{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AGASMQ{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QSAMQ{[TV]|[{I|L}S]};[PA]{M(Oxidation (M))|F}GSAM[AG]{[TV]|[{I|L}S]};[PA]{M(Oxidation (M))|F}QSMQ{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QASMQ{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AGSAM[AG]{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AQSMQ{[TV]|[{I|L}S]} 6.4418;6.1823;6.143;5.8835;5.748;5.5322;5.4947;5.4492;5.2727;5.2352 -;-;-;-;-;-;+;-;-;- + 384 1 1.468 39263.4 1.0 6644 4708 11349 HBL1_DMSO_200M_050219_2,11354 HBL1_DMSO_200M_050219_2,11354,APFQSMQTV True True APFQSMQTV 61.27647 504.744616687298 21259780.0 11349.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 6.206971645355225 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11355 61.278 50.0 832530.0 25 0 85073.0 + 3431 AYYVSNEEL 9 58 544.2508100242575 1086.4870671153149 2 544.2512084841728 MULTI CID FTMS 0 0 0 11349 968855.125 0.8915703520492563 -1 0.0990867614746093 6 Unmodified _AYYVSNEEL_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 9.347437153973935 0.588369872918737 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y 3 6 27.447 0.0 0.0 2.5262 0.0 0.0 0.0 686.3003888404537 686.3003888404537 10.280287236002437 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y 2.5262 + + 71 1 1.468 37100.3 1.0 6645 4708 11349 HBL1_DMSO_200M_050219_2,11355 HBL1_DMSO_200M_050219_2,11355,AYYVSNEEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11356 61.279 55.0 847720.0 25 0 54855.0 + 22157 LPPSALQSV 9 83 456.26346091798274 910.5123689027656 2 456.2634765505791 MULTI CID FTMS 0 0 0 11349 938152.125 0.6669113566699648 7 -0.7131805419921875 7 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 39.957323273325 0.0756908302845263 4 [{I|L}P]{[SA]|[TG]}P{I|L}Q[VS] 9 2 + 39.26 0.0 0.0 4.3119 4.3119 49.825 0.0 0.0 0.0 9.3384545594172 19.198310941415983 9.3384545594172 0.0 0 0.5 1.6989700043360187 0.2887254899964357 0.0 [{I|L}P]{[SA]|[TG]}P{I|L}Q[VS];[{I|L}P][PS]A{I|L}Q[VS];[{I|L}P][PS]AQ{I|L}[VS];[{I|L}P]{[SA]|[TG]}PQ{I|L}[VS];[{I|L}P][PS]A{I|L}[AG][VS];[{I|L}P]{[SA]|[TG]}P{I|L}[AG][VS];[{I|L}P][PS]A[AG]{I|L}[VS];[{I|L}P]{[SA]|[TG]}P[AG]{I|L}[VS];[{I|L}P]{[SA]|[TG]}QP{I|L}[VS];[{I|L}P]{[SA]|[TG]}[AG]P{I|L}[VS] 4.3119;4.3119;3.9812;3.9812;3.3005;3.3005;2.9699;2.9699;2.8095;1.7982 -;+;-;-;-;-;-;-;-;- + 187 1 1.468 43897.1 1.0 6646 4708 11349 HBL1_DMSO_200M_050219_2,11356 HBL1_DMSO_200M_050219_2,11356,LPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11357 61.282 145.0 514440.0 25 0 124590.0 -1 0 73 586.2860693421702 585.2787928755702 1 586.2869140505791 MULTI CID FTMS 0 0 0 11349 599058.4375 0.47831351250575 2 -0.2408294677734375 8 4 YYGA{I|L} 5 -1 + 31.884 0.0 0.0 5.4477 5.4477 72.036 0.0 0.0 0.0 2.210952514410778 2.210952514410778 2.210952514410778 1.249387366082999 0 0.0 1.5228787452803376 0.0 0.0 YYGA{I|L};YYQ{I|L};QYY{I|L};[YQ]Y{I|L} 5.4477;5.2342;5.0699;4.3866 -;-;-;- 43 1 1.468 62328.2 1.0 6647 4708 11349 HBL1_DMSO_200M_050219_2,11357 HBL1_DMSO_200M_050219_2,11357, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11358 61.287 255.0 429180.0 25 0 34525.0 + 32320 RYIMGSGESF 10 118 573.7654229034779 1145.5162928737557 2 573.7657348513603 MULTI CID FTMS 0 0 0 11349 392876.90625 0.812653086790114 -1 0.0990867614746093 9 Unmodified _RYIMGSGESF_ ENSG00000178605|ENST00000326153|GTPBP6 45.739877483867886 0.1051543674217965 4 [VS]V{M(Oxidation (M))|F}MGSGES{M(Oxidation (M))|F} 11 4 + 75.103 0.0 0.0 6.5563 6.5563 78.36 0.0 0.0 0.0 2.253606678833449 16.575773191777927 2.253606678833449 2.253606678833449 0 1.0 0.0 0.868415180652539 0.0 [VS]V{M(Oxidation (M))|F}MGSGES{M(Oxidation (M))|F};[TA]{I|L}{M(Oxidation (M))|F}MGSGES{M(Oxidation (M))|F};[{I|L}T]A{M(Oxidation (M))|F}MGSGES{M(Oxidation (M))|F};[YR]{I|L}MGSGES{M(Oxidation (M))|F};[{I|L}A]T{M(Oxidation (M))|F}MGSGES{M(Oxidation (M))|F};[VS]V{M(Oxidation (M))|F}MGSWS{M(Oxidation (M))|F};[YR]{I|L}MGSGTD{M(Oxidation (M))|F};[VS]V{M(Oxidation (M))|F}MGSGTD{M(Oxidation (M))|F};[{I|L}T]A{M(Oxidation (M))|F}MGSWS{M(Oxidation (M))|F};[TA]{I|L}{M(Oxidation (M))|F}MGSWS{M(Oxidation (M))|F} 6.5563;6.3595;6.3595;6.2781;6.2419;5.9822;5.9112;5.857;5.7855;5.7855 -;-;-;+;-;-;-;-;-;- + 1563 1 1.468 83252.7 1.0 6648 4708 11349 HBL1_DMSO_200M_050219_2,11358 HBL1_DMSO_200M_050219_2,11358,RYIMGSGESF True True RYIMGSGESF 61.286858 573.76573485136 3674598.25 11349.0 ENSG00000178605|ENST00000326153|GTPBP6 6.977561314900716 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11359 61.29 131.0 716810.0 25 0 237520.0 + -1 YYLNELCGHFS 11 83 701.8097379816904 1401.6049230301808 2 701.8100463747978 MULTI CID FTMS 0 0 0 11349 381874.21875 1.0 0 0.0 10 Carbamidomethyl (C) _YYLNELC(Carbamidomethyl (C))GHFS_ REV__ENSG00000106714|ENST00000297668|CNTNAP3;REV__ENSG00000154529|ENST00000377561|CNTNAP3B;REV__ENSG00000283378|ENST00000636699|CNTNAP3C;REV__ENST00000377653.2_1_9:39174468-39266986:-|nuORF;REV__nc|ENSG00000154529|Q96NU0-2|CNTNAP3B;REV__nc|ENSG00000283378|Q9BZ76-2|CNTNAP3 15.248480904072842 0.7179608125786238 4 YY{I|L}T[DN]DPRE 10 -1 78.919 0.0 0.0 5.6307 0.0 0.0 0.0 132.0458162897094 132.0458162897094 54.45554701812867 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.3252574989159953 YY{I|L}T[DN]DPRE 5.6307 - 622 + 1 1.468 70829.0 1.0 6649 4708 11349 HBL1_DMSO_200M_050219_2,11359 HBL1_DMSO_200M_050219_2,11359,YYLNELCGHFS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11360 61.303 778.0 288340.0 25 0 19303.0 + 6528 MPLQTGTAQI 10 229 530.2781425678411 1058.541732202482 2 530.2783080935478 MULTI CID FTMS 0 0 0 11349 236029.1875 1.0 0 0.0 11 Unmodified _EALAWASAQI_ nc|ENSG00000064393|Q9H2X6-3|HIPK2;nc|ENSG00000064393|Q9H2X6-2|HIPK2;ENSG00000064393|ENST00000406875|HIPK2 34.40172386719151 0.2166836008404837 4 [AG]{I|L}PMTGTAQ{I|L} 11 6 + 64.248 0.0 0.0 6.0695 6.0695 78.402 0.0 0.0 0.0 6.131581793893815 13.080923170097854 6.131581793893815 3.133345013315271 0 0.3494850021680094 1.5228787452803376 1.2396518287104437 0.0 [AG]{I|L}PMTGTAQ{I|L};[AG]{I|L}PTMGTAQ{I|L};[AG]{I|L}PTGMTAQ{I|L};[{I|L}P]QMTGTAQ{I|L};[Q{I|L}]PMTGTAQ{I|L};[AG]{I|L}PMTGTA[AG]{I|L};[{I|L}P]QTMGTAQ{I|L};[AG]{I|L}PTGTMAQ{I|L};{[VA]|[{I|L}G]}APMTGTAQ{I|L};[AG]P{I|L}MTGTAQ{I|L} 6.0695;5.7735;5.5698;5.4903;5.2936;5.2072;5.1943;5.0427;5.0416;5.0278 -;-;-;-;-;-;-;-;-;- 7522 1 1.468 171031.5 1.0 6650 4708 11349 HBL1_DMSO_200M_050219_2,11360 HBL1_DMSO_200M_050219_2,11360,EALAWASAQI False False MPLQTGTAQI 61.303014 530.278308093548 2593220.0 11349.0 nc|ENSG00000064393|Q9H2X6-3|HIPK2;;nc|ENSG00000064393|Q9H2X6-2|HIPK2;;ENSG00000064393|ENST00000406875|HIPK2 5.012751738230388 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11361 61.317 800.0 253610.0 25 0 35198.0 -1 0 89 978.9378657627664 1955.8611785923329 2 978.9372436404228 MULTI CID FTMS 0 0 0 11349 224009.734375 1.0 0 0.0 12 4 {M(Oxidation (M))|F} 1 -1 10.837 0.0 0.0 0.5541 0.0 0.0 1790.8183146780732 0.0 1790.8183146780732 0.0 5.352905371428536 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.5541 - 35 + 1 1.468 136945.4 0.9100000262260436 6651 4708 11349 HBL1_DMSO_200M_050219_2,11361 HBL1_DMSO_200M_050219_2,11361, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11362 61.324 373.0 310210.0 25 0 18462.0 + 7706 ELAKELPQV 9 140 513.7956155953715 1025.5766782575429 2 513.7955810427666 MULTI CID FTMS 0 0 0 11349 239124.5 0.7388933532869718 -1 0.0990867614746093 13 Unmodified _ELAKELPQV_ ENSG00000108010|ENST00000331244|GLRX3 99.7552728972412 0.0110101799492648 4 {[QN]|[E{I|L}]|[KN]}KAE{I|L}PQV 9 2 + 81.441 0.0 0.0 7.941 7.941 91.76 0.0 0.0 0.0 10.09955584830827 14.973024840566453 10.09955584830827 9.208187539523747 0 1.305462187404089 2.0 2.4386218330464624 0.0 {[QN]|[E{I|L}]|[KN]}KAE{I|L}PQV;{[QN]|[E{I|L}]|[KN]}KAE{I|L}P[AG]V;[{I|L}T]QVE{I|L}PQV;{[QN]|[E{I|L}]|[KN]}G[{I|L}T]G{I|L}PQV;[{I|L}T]QVE{I|L}P[AG]V;{[QN]|[E{I|L}]|[KN]}G[{I|L}T]G{I|L}P[AG]V;[DV]KVE{I|L}PQV;{[QN]|[E{I|L}]|[KN]}Q[{I|L}T]VPQV;[{I|L}T][AG]VE{I|L}PQV;[{I|L}T][VG]AE{I|L}PQV 7.941;7.0431;6.9562;6.9074;6.0583;6.0138;5.8859;5.8238;5.6442;5.5447 -;-;-;-;-;-;-;-;-;- 2595 1 1.468 94119.5 1.0 6652 4708 11349 HBL1_DMSO_200M_050219_2,11362 HBL1_DMSO_200M_050219_2,11362,ELAKELPQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11363 61.337 800.0 248190.0 25 0 24886.0 + 5715 DPLHCFVSIT 10 170 566.2800491237548 1130.5455453143095 2 566.2817870974541 MULTI CID FTMS 0 0 0 11349 177934.40625 0.5250094741238855 -2 0.2032127380371093 14 Unmodified _DPLHCFVSIT_ REV__ENSG00000183914|ENST00000572933|DNAH2;REV__nc|ENSG00000183914|Q9P225-2|DNAH2 30.63653989081413 0.2803493085145199 4 [DP]{I|L}PQ{I|L}M[CS]K 10 -1 + 42.816 0.0 0.0 3.7872 3.7872 66.133 0.0 0.0 0.0 12.972834284235908 0.3008351599381527 0.3008351599381527 1.5530196597448125 0 0.9247425010840048 1.5228787452803376 0.5649093276264391 0.3416328861051033 [DP]{I|L}PQ{I|L}M[CS]K;[DP]{I|L}PQ{I|L}C(Carbamidomethyl (C))A{[MS]|[{M(Oxidation (M))|F}A]};[DP]{I|L}QWM[WR];[DP]{I|L}P[AG]{I|L}M[CS]K;[DP]{I|L}PQ{I|L}[CG]A{[MS]|[{M(Oxidation (M))|F}A]};[DP]{I|L}P[AG]{I|L}C(Carbamidomethyl (C))A{[MS]|[{M(Oxidation (M))|F}A]};[DP]{I|L}P[Y{M(Oxidation (M))|F}][PS]PV;[DP]{I|L}V[DV][WC(Carbamidomethyl (C))]K;[DP]{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]}[WC(Carbamidomethyl (C))]V;[{I|L}P]ST[Y{M(Oxidation (M))|F}]P{I|L}{[HG]|PP} 3.7872;3.6498;3.0835;2.9765;2.8392;2.618;2.495;2.4932;2.4782;2.4313 -;-;-;-;-;-;-;-;-;- 1980 + 1 1.468 152851.3 0.9100000262260436 6653 4708 11349 HBL1_DMSO_200M_050219_2,11363 HBL1_DMSO_200M_050219_2,11363,DPLHCFVSIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11364 61.351 800.0 73882.0 25 0 2598.7 33773 SLARWNYFFLY 11 100 740.3726024786489 1478.7306520240977 2 740.8742553591728 MULTI CID FTMS 0 0 0 11349 149257.25 1.0 0 0.0 15 Unmodified _SLARWNYFFLY_ ENST00000481910.1_1_22:26872952-26875347:-|nuORF;ENST00000496385.5_1_22:26862186-26875401:-|nuORF;nc|ENSG00000100099|Q9NQG7-3|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4 5.731851221503515 0.8481046878870278 4 [{I|L}T]GV{I|L}G 6 9 28.607 0.0 0.0 1.9346 0.0 0.0 0.0 935.379015192252 935.379015192252 14.194699959806982 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.6747425010840047 0.0 [{I|L}T]GV{I|L}G 1.9346 - 648 1 1.468 53922.1 0.8399999737739563 6654 4708 11349 HBL1_DMSO_200M_050219_2,11364 HBL1_DMSO_200M_050219_2,11364,SLARWNYFFLY False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 11365 61.367 800.0 70933.0 25 0 8323.2 -1 0 77 971.8939771435292 1941.7734013538584 2 972.3973876833916 MULTI CID FTMS 0 0 0 11349 148967.96875 1.0 0 0.0 16 4 {[DA]|[EG]}V{I|L} 4 -1 29.27 0.0 0.0 1.5074 0.0 0.0 0.0 1540.5329893267678 1540.5329893267678 14.57711861032834 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 {[DA]|[EG]}V{I|L} 1.5074 - 98 1 1.468 45315.9 0.800000011920929 6655 4708 11349 HBL1_DMSO_200M_050219_2,11365 HBL1_DMSO_200M_050219_2,11365, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11366 61.38 800.0 113140.0 25 0 7906.4 -1 0 131 602.3398566560084 601.3325801894083 1 602.3417846560478 MULTI CID FTMS 0 0 0 11349 118935.515625 0.8110787836811891 1 -0.1130142211914062 17 4 {I|L}{I|L}DE{I|L} 5 -1 + 61.956 0.0 0.0 10.303 10.303 98.073 0.0 0.0 0.0 41.479400086720375 15.0 15.0 23.70674301237948 0 1.3807196863200843 1.6989700043360187 1.274227503252014 0.0 {I|L}{I|L}DE{I|L};{I|L}{I|L}EEV;{[QN]|[E{I|L}]|[KN]}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}E{I|L};{I|L}{I|L}[NG]SV;{[QN]|[E{I|L}]|[KN]}D{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}KN{I|L};[VS]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L} 10.303;6.3607;6.3336;6.213;6.1376;5.2921;5.1998;5.1715;4.1702;3.9523 -;-;-;-;-;-;-;-;-;- 211 + 1 1.468 69759.9 0.9200000166893004 6656 4708 11349 HBL1_DMSO_200M_050219_2,11366 HBL1_DMSO_200M_050219_2,11366, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11368 61.385 3.7 12540000.0 25 0 1886300.0 + 3904 DALDVANKI 9 69 479.7639217668962 957.5132906005924 2 479.7642700076103 MULTI CID FTMS 0 0 0 11367 14802852.0 0.8427910046433392 1 -0.1278152465820312 1 Unmodified _DALDVANKI_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;ENST00000491601.1_1_17:38595721-38595772:-|nuORF 60.07390631473393 0.0260411565414776 4 {[DA]|[EG]}{I|L}DVANK{I|L} 9 0 + 92.317 0.0 0.0 9.6414 9.6414 93.76 0.0 0.0 0.0 60.228787452803374 11.962724883926654 11.962724883926654 9.208187539523747 0 1.566901560044258 2.0 0.0 0.805462187404089 + + {[DA]|[EG]}{I|L}DVANK{I|L};{[DA]|[EG]}{I|L}DVAGGK{I|L} 9.6414;8.6797 +;- + 314 + 1 1.466 42528.1 1.0 6657 4709 11367 HBL1_DMSO_200M_050219_2,11368 HBL1_DMSO_200M_050219_2,11368,DALDVANKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11369 61.386 43.0 920130.0 25 0 125670.0 + 26781 PAGYHPCYI 9 80 510.735203921396 1019.455854909592 2 510.7356140017509 MULTI CID FTMS 0 0 0 11367 835864.1875 0.0861143485076153 5 -0.5206375122070312 2 Unmodified _PAGYHPCYI_ REV__ENSG00000099617|ENST00000215368|EFNA2 14.581692164780916 0.4419739649577144 4 V 1 -1 13.979 0.0 0.0 1.3713 0.0 0.0 902.3762783488484 0.0 902.3762783488484 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3713 - 73 + 1 1.466 37884.0 1.0 6658 4709 11367 HBL1_DMSO_200M_050219_2,11369 HBL1_DMSO_200M_050219_2,11369,PAGYHPCYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11370 61.388 87.0 823220.0 25 0 105410.0 41385 VPKTPVEI 8 80 441.7683182352048 881.5220835372097 2 441.7685424685478 MULTI CID FTMS 0 0 0 11367 802066.4375 0.8999414862082348 5 -0.5206375122070312 3 Unmodified _VPKTPVEI_ ENST00000529587.1_1_11:9806704-9806878:-|nuORF 25.399314129420983 0.5099049743284904 4 VPP 3 5 48.06 0.0 0.0 5.4519 0.0 0.0 0.0 585.3266695611936 585.3266695611936 33.44544365819424 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VPP 5.4519 - 172 + 1 1.466 60946.5 1.0 6659 4709 11367 HBL1_DMSO_200M_050219_2,11370 HBL1_DMSO_200M_050219_2,11370,VPKTPVEI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11371 61.39 84.0 1051400.0 25 0 95272.0 + + 22125 LPNKVDPLV 9 106 497.8004901100049 993.5864272868098 2 497.8005248904228 MULTI CID FTMS 0 0 0 11367 743358.375 0.4594856627917928 -2 0.2121009826660156 4 Unmodified _LPPPVYPVL_ nc|ENSG00000087191|P62195-2|PSMC5;ENST00000581764.1_1_17:61907522-61908306:+|nuORF;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;ENSG00000087191|ENST00000310144|PSMC5 45.7499826716795 0.0496882803020414 4 {I|L}[{I|L}T]{I|L}DAH{I|L}V 9 -1 + 44.836 0.0 0.0 4.5125 4.5125 67.237 0.0 0.0 0.0 5.145680359949552 3.52182518111362 3.52182518111362 0.7403126772771884 0 1.0 0.0 0.3054621874040891 0.0 {I|L}[{I|L}T]{I|L}DAH{I|L}V;{I|L}[{I|L}T]{I|L}DA{I|L}HV;{I|L}[{I|L}T]{I|L}DAHV{I|L};{I|L}[{I|L}T]D{I|L}AH{I|L}V;{I|L}[{I|L}T]D{I|L}A{I|L}HV;{I|L}[{I|L}T]D{I|L}AHV{I|L};{I|L}[{I|L}T]{I|L}DVAH{I|L};{I|L}{[QN]|[E{I|L}]|[KN]}S{I|L}AH{I|L}V;{I|L}{[QN]|[E{I|L}]|[KN]}S{I|L}A{I|L}HV;{I|L}{[QN]|[E{I|L}]|[KN]}S{I|L}AHV{I|L} 4.5125;4.438;4.1581;3.7249;3.6504;3.3704;2.8538;2.7415;2.667;2.387 -;-;-;-;-;-;-;-;-;- 535 + 1 1.466 71057.6 1.0 6660 4709 11367 HBL1_DMSO_200M_050219_2,11371 HBL1_DMSO_200M_050219_2,11371,LPPPVYPVL False False LPNKVDPLV 61.389761 497.800524890423 43187016.0 11367.0 nc|ENSG00000087191|P62195-2|PSMC5;;ENST00000581764.1_1_17:61907522-61908306:+|nuORF;;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;;ENSG00000087191|ENST00000310144|PSMC5 5.008501211802165 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11372 61.392 89.0 940040.0 25 0 176790.0 + 18396 KVVDVDVKL 9 114 507.8133440164566 1013.6121350997132 2 507.8136779665947 MULTI CID FTMS 0 0 0 11367 630401.75 1.0 0 0.0 5 Unmodified _KVVDVDVKL_ ENSG00000101350|ENST00000375712|KIF3B 48.56086444690353 0.0435252967961103 4 KVVDVDVK{I|L} 9 0 + 74.452 0.0 0.0 7.3452 7.3452 83.847 0.0 0.0 0.0 18.607566184384225 3.853508813640176 3.853508813640176 3.853508813640176 0 2.853917193908117 0.8239087409443188 0.0 0.2302046884880938 + + KVVDVDVK{I|L};KVVDVDV{I|L}K;KVVDVD{I|L}VK;KVVDVD{I|L}KV;{[QV]|[N{I|L}]|[RA]|[KV]}V[{M(Oxidation (M))|F}V][PG][R{I|L}] 7.3452;6.965;5.3032;5.1211;0.60398 +;-;-;-;- + 823 + 1 1.466 69842.7 1.0 6661 4709 11367 HBL1_DMSO_200M_050219_2,11372 HBL1_DMSO_200M_050219_2,11372,KVVDVDVKL True True KVVDVDVKL 61.391722 507.813677966595 4882187.5 11367.0 ENSG00000101350|ENST00000375712|KIF3B 4.732525587081909 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11373 61.395 162.0 545900.0 25 0 98912.0 -1 0 100 340.20952759923875 678.4045022652775 2 340.2093688845634 MULTI CID FTMS 0 0 0 11367 506139.625 0.0405548963419158 7 -0.6795654296875 6 4 Y 1 -1 4.9743 0.0 0.0 0.73323 0.0 0.0 339.23895768695564 173.08237634830314 512.3213340352588 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 Y 0.73323 - 1 + 1 1.466 74937.8 1.0 6662 4709 11367 HBL1_DMSO_200M_050219_2,11373 HBL1_DMSO_200M_050219_2,11373, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11374 61.397 69.0 556360.0 25 0 29704.0 + 34832 SQFPTPEAV 9 77 488.2431713763867 0 488.2431518435478 PEAK CID FTMS 0 0 0 11367 313988.90625 0.4018132222335974 -3 0.3162269592285156 7 Unmodified _SQFPTPEAV_ ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 13.042465956692816 0.2773713495150148 4 C(Carbamidomethyl (C)){M(Oxidation (M))|F} 2 8 10.969 0.0 0.0 1.1256 0.0 0.0 452.2733167744547 212.06813989810783 664.3414566725626 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){M(Oxidation (M))|F} 1.1256 - 33 + 1 1.466 38237.0 1.0 6663 4709 11367 HBL1_DMSO_200M_050219_2,11374 HBL1_DMSO_200M_050219_2,11374,SQFPTPEAV False True SQFPTPEAV 61.396534 488.243151843548 13158793.0 11367.0 ENSG00000109111|ENST00000314616|SUPT6H;;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 5.532790660858154 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11375 61.401 222.0 426060.0 25 0 40186.0 + 35010 SQPGTFPAV 9 134 452.2319174558461 902.4492819784922 2 452.2323181033134 MULTI CID FTMS 0 0 0 11367 287023.0 0.7965002585123047 -1 0.1130142211914062 8 Unmodified _SQPGTFPAV_ ENSG00000102908|ENST00000349945|NFAT5;nc|ENSG00000102908|O94916-2|NFAT5;nc|ENSG00000102908|O94916-4|NFAT5;nc|ENSG00000102908|O94916|NFAT5 34.10243960390752 0.1078313939113124 4 [PA]S{M(Oxidation (M))|F}P 5 6 24.371 0.0 0.0 2.7005 0.0 0.0 0.0 400.18146516624535 400.18146516624535 3.6204289615447074 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.7059771852360797 0.0 [PA]S{M(Oxidation (M))|F}P 2.7005 - 257 1 1.466 77655.9 1.0 6664 4709 11367 HBL1_DMSO_200M_050219_2,11375 HBL1_DMSO_200M_050219_2,11375,SQPGTFPAV True True SQPGTFPAV 61.400714 452.2329 6022949.0 11367.0 nc|ENSG00000102908|O94916-2|NFAT5;;nc|ENSG00000102908|O94916-4|NFAT5;;ENSG00000102908|ENST00000349945|NFAT5;;nc|ENSG00000102908|O94916|NFAT5 4.1195068359375 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11376 61.402 37.0 1954500.0 25 0 556090.0 + 35390 STFGELKTV 9 68 491.2662688251386 980.5179847170772 2 491.2671081423759 MULTI CID FTMS 0 0 0 11367 297965.6875 0.4962771285771227 1 -0.1278152465820312 9 Unmodified _STFGELKTV_ ENSG00000122965|ENST00000261741|RBM19 17.11289562659939 0.3734572693229295 4 W 1 9 11.783 0.0 0.0 1.2017 0.0 0.0 776.4280016621929 0.0 776.4280016621929 0.0 -6.176063555871689 -6.176063555871689 0.0 0 0.0 0.0 0.0 0.0 W 1.2017 - 37 + 1 1.466 61033.3 1.0 6665 4709 11367 HBL1_DMSO_200M_050219_2,11376 HBL1_DMSO_200M_050219_2,11376,STFGELKTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11377 61.406 240.0 358660.0 25 0 36153.0 -1 0 105 632.9779281392716 1895.9119550180149 3 632.9783203005791 MULTI CID FTMS 0 0 0 11367 285071.46875 0.4064781271118085 -3 0.3162269592285156 10 4 YV{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 8 -1 41.389 0.0 0.0 2.183 0.0 0.0 890.4098377912125 0.0 890.4098377912125 0.0 23.72990309098224 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 YV{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 2.183 - 233 1 1.466 70309.7 1.0 6666 4709 11367 HBL1_DMSO_200M_050219_2,11377 HBL1_DMSO_200M_050219_2,11377, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11378 61.411 240.0 582340.0 25 0 48079.0 + + 28529 MAYAGARFV 9 147 494.2792296155926 986.5439062979852 2 494.2778808474541 MULTI CID FTMS 0 0 0 11367 222698.4375 0.7446652102207021 -1 0.1130142211914062 11 Unmodified _PTPAQVIYV_ nc|ENSG00000146701|P40926-2|MDH2;ENSG00000146701|ENST00000315758|MDH2;ENST00000424167.2_1_7:75689738-75694307:+|nuORF 25.399314129420983 0.2080152500878129 4 TQV[YV]{I|L} 6 -1 35.562 0.0 0.0 3.6047 0.0 0.0 265.1432362287125 0.0 265.1432362287125 0.0 18.06553388754701 0.0 0.0 0 0.6109243748081782 0.0 0.8807196863200843 0.2396518287104437 TQV[YV]{I|L} 3.6047 - 586 1 1.466 111835.3 1.0 6667 4709 11367 HBL1_DMSO_200M_050219_2,11378 HBL1_DMSO_200M_050219_2,11378,PTPAQVIYV False False MAYAGARFV 61.410868 494.2802 4488264.0 11367.0 nc|ENSG00000146701|P40926-2|MDH2;;ENSG00000146701|ENST00000315758|MDH2;;ENST00000424167.2_1_7:75689738-75694307:+|nuORF 1.4658562044302623 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11379 61.416 262.0 284250.0 25 0 21209.0 + 10546 FVENDKLVGV 10 124 560.3073001083503 1118.6000472835003 2 560.3066894412041 MULTI CID FTMS 0 0 0 11367 202471.984375 0.036670742247887 5 -0.5206375122070312 12 Unmodified _FVENDKLVGV_ ENSG00000198924|ENST00000361384|DCLRE1A 25.399314129420983 0.3980215340001851 4 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VQA{NN|[MP]|[D{I|L}]|[EV]} 10 7 + 50.708 0.0 0.0 4.5332 4.5332 78.741 0.0 0.0 0.0 18.58855321194028 15.936599577919845 15.936599577919845 9.164539485499247 0 0.8807196863200843 2.0 0.4303115997617928 0.3494850021680094 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}VQA{NN|[MP]|[D{I|L}]|[EV]};{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V[AG]A{NN|[MP]|[D{I|L}]|[EV]};{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V[KA]{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}[KS]MVTAVR;{[TV]|[{I|L}S]}[RN]A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}[KS]MV[KA]{NN|[MP]|[D{I|L}]|[EV]};{[QG]|[NA]}[TA]{I|L}EV{M(Oxidation (M))|F}VR;{[QG]|[NA]}[TA]E{I|L}V{M(Oxidation (M))|F}VR;[VG][NS]{I|L}EV{M(Oxidation (M))|F}VR;[VG][NS]E{I|L}V{M(Oxidation (M))|F}VR 4.5332;3.7139;3.126;2.5924;2.3563;1.9796;1.7742;1.7224;1.7194;1.6676 -;-;-;-;-;-;-;-;-;- 710 1 1.466 60166.5 1.0 6668 4709 11367 HBL1_DMSO_200M_050219_2,11379 HBL1_DMSO_200M_050219_2,11379,FVENDKLVGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11380 61.43 800.0 204320.0 25 0 13956.0 + 4563 DAYREAQQLV 10 159 596.8015162784674 1191.5884796237349 2 596.8025390505791 MULTI CID FTMS 0 0 0 11367 162067.171875 1.0 0 0.0 13 Unmodified _DAYREAQQLV_ ENSG00000173020|ENST00000308595|GRK2;ENST00000416281.6_1_11:67049840-67052918:+|nuORF;ENST00000524899.1_1_11:67052494-67052918:+|nuORF 51.41523569358685 0.0718446036348414 4 {[DA]|[EG]}YREAQQ{I|L}V 10 0 + 80.599 0.0 0.0 6.764 6.764 87.085 0.0 0.0 0.0 22.674610143698004 15.026975159433531 15.026975159433531 8.556944363783515 0 0.7742275032520141 1.6989700043360187 0.8038456768417812 0.3494850021680094 + + {[DA]|[EG]}YREAQQ{I|L}V;{[DA]|[EG]}YRAAQAD{I|L}V;{[DA]|[EG]}YREA[AG]Q{I|L}V;{[DA]|[EG]}Y[VG]EAQQ{I|L}V;{[DA]|[EG]}YREAQ[AG]{I|L}V;{[DA]|[EG]}YRAAAGAD{I|L}V;{[DA]|[EG]}YRAAADQ{I|L}V;{[DA]|[EG]}G[YV]EAQQ{I|L}V;{[DA]|[EG]}YR[RN]AD{I|L}V;{[DA]|[EG]}Y{[VA]|[{I|L}G]}QQAD{I|L}V 6.764;6.0459;5.9949;5.9949;5.9949;5.8916;5.5487;5.5383;5.4941;5.3929 +;-;-;-;-;-;-;-;-;- + 6243 1 1.466 125814.4 0.9900000095367432 6669 4709 11367 HBL1_DMSO_200M_050219_2,11380 HBL1_DMSO_200M_050219_2,11380,DAYREAQQLV True True DAYREAQQLV 61.429557 596.802539050579 1465913.25 11367.0 ENST00000524899.1_1_11:67052494-67052918:+|nuORF;;ENSG00000173020|ENST00000308595|GRK2;;ENST00000416281.6_1_11:67049840-67052918:+|nuORF 6.128235816955566 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11381 61.435 302.0 300510.0 25 0 22511.0 15310 IPLFGVHY 8 127 473.2631910491512 944.5118291651024 2 473.2630798220634 MULTI CID FTMS 0 0 0 11367 162934.0 1.0 0 0.0 14 Unmodified _IPLFGVHY_ ENSG00000106018|ENST00000262178|VIPR2;ENSG00000114812|ENST00000325123|VIPR1;ENST00000498102.1_1_3:42576287-42577770:+|nuORF;nc|ENSG00000106018|P41587-2|VIPR2;nc|ENSG00000114812|P32241-2|VIPR1;nc|ENSG00000114812|P32241-3|VIPR1;nc|ENSG00000114812|P32241-4|VIPR1;nc|ENSG00000114812|P32241-5|VIPR1 24.20995872069341 0.5349487244130675 4 {I|L}P{I|L} 3 5 50.93 0.0 0.0 5.3922 0.0 0.0 0.0 618.2681842357862 618.2681842357862 31.475993204333147 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + {I|L}P{I|L} 5.3922 + + 245 + 1 1.466 75586.7 1.0 6670 4709 11367 HBL1_DMSO_200M_050219_2,11381 HBL1_DMSO_200M_050219_2,11381,IPLFGVHY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11382 61.449 800.0 238580.0 25 0 17603.0 -1 IDAQGATLMQM 11 155 605.7759845191509 1209.5374161051018 2 605.7747680544853 MULTI CID FTMS 0 0 0 11367 154293.140625 0.2564588417617661 -2 0.2121009826660156 15 2 Oxidation (M) _IDAQGATLM(Oxidation (M))QM(Oxidation (M))_ nc|ENSG00000101445|Q96T49-2|PPP1R16B 26.268140514670165 0.4754186812857754 4 [QA]W{[SA]|[TG]}{I|L}{I|L}T{[CA]|SS}{M(Oxidation (M))|F} 11 -1 + 54.663 0.0 0.0 4.5193 4.5193 83.786 0.0 0.0 0.0 15.86800366225745 5.349008746626403 5.349008746626403 25.1143638757678 0 1.8818108876706967 0.958607314841775 0.6549471895720985 0.0 [QA]W{[SA]|[TG]}{I|L}{I|L}T{[CA]|SS}{M(Oxidation (M))|F};[QA]WH{M(Oxidation (M))|F}[PG]DGPV;[QA]WHHE[KQ]{M(Oxidation (M))|F};[QA]AD[YG][C(Carbamidomethyl (C))K]V[QA];[QA]WH{M(Oxidation (M))|F}YYPV;[QA]WHH{I|L}[C(Carbamidomethyl (C))R]C;[QA]WH{M(Oxidation (M))|F}[VP]YY;[QA]WQQ[C(Carbamidomethyl (C))H]GPV;[QA]W{[QG]|[NA]}A[C(Carbamidomethyl (C))H]GPV;[QA]WH{M(Oxidation (M))|F}Q[EP][PA] 4.5193;2.443;2.3202;1.8387;1.488;1.4823;1.0235;0.98041;0.88072;0.86779 -;-;-;-;-;-;-;-;-;- 2730 + 1 1.466 138663.3 0.9700000286102296 6671 4709 11367 HBL1_DMSO_200M_050219_2,11382 HBL1_DMSO_200M_050219_2,11382,IDAQGATLMQM False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11383 61.458 503.0 439670.0 25 0 39015.0 + 24744 MPFDPSKV 8 159 460.73043413808574 919.4463153429716 2 460.7291747927666 MULTI CID FTMS 0 0 0 11367 129960.4296875 0.1410989577890661 -2 0.2121009826660156 16 Unmodified _MPFDPSKV_ ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB 62.57269311338072 0.1158273023829763 4 MP{M(Oxidation (M))|F}DPSKV 8 0 + 87.864 0.0 0.0 9.5562 9.5562 91.198 0.0 0.0 0.0 36.00924219312397 7.269987279362624 7.269987279362624 7.269987279362624 0 1.579689690656103 2.0 0.3252574989159953 0.5941876774005248 + + MP{M(Oxidation (M))|F}DPSKV;MP{M(Oxidation (M))|F}DPSVK;MP{M(Oxidation (M))|F}DVKPS;MP{M(Oxidation (M))|F}DV[PS]K;MP{M(Oxidation (M))|F}D[KS]PV;MP{M(Oxidation (M))|F}DV[QA]{I|L};MP{M(Oxidation (M))|F}DV[VG]GV;MP{M(Oxidation (M))|F}DV[Q{I|L}]A;MP[EC][{I|L}T]KV;MP{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]P{I|L} 9.5562;8.7655;7.9227;7.5429;7.1114;7.0546;6.9141;6.6715;5.309;5.2219 +;-;-;-;-;-;-;-;-;- + 1290 + 1 1.466 174071.7 1.0 6672 4709 11367 HBL1_DMSO_200M_050219_2,11383 HBL1_DMSO_200M_050219_2,11383,MPFDPSKV True True MPFDPSKV 61.457784 460.729174792767 14784216.0 11367.0 nc|ENSG00000136068|O75369-5|FLNB;;nc|ENSG00000136068|O75369-3|FLNB;;nc|ENSG00000136068|O75369-4|FLNB;;nc|ENSG00000136068|O75369-7|FLNB;;nc|ENSG00000136068|O75369-2|FLNB;;ENSG00000136068|ENST00000295956|FLNB;;nc|ENSG00000136068|O75369-6|FLNB;;nc|ENSG00000136068|O75369-9|FLNB;;nc|ENSG00000136068|O75369-8|FLNB 8.198840618133545 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11384 61.465 345.0 249780.0 25 0 26472.0 + 35807 VIPKEVTPAL 10 126 533.8292154217023 1065.6438779102043 2 533.8293334841728 MULTI CID FTMS 0 0 0 11367 125408.9921875 0.780487680359845 -2 0.2121009826660156 17 Unmodified _SVIYLFLVL_ ENST00000402902.1_1_6:66803326-66803860:-|nuORF;ENSG00000083635|ENST00000379161|NUFIP1 30.22481116460888 0.1466181017706357 4 [{I|L}V]SGPTPA 8 7 61.261 0.0 0.0 5.7488 0.0 0.0 0.0 340.22496295887214 340.22496295887214 45.14192029029264 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.805462187404089 0.0 [{I|L}V]SGPTPA 5.7488 - 1204 1 1.466 71031.7 1.0 6673 4709 11367 HBL1_DMSO_200M_050219_2,11384 HBL1_DMSO_200M_050219_2,11384,SVIYLFLVL False False VIPKEVTPAL 61.465498 533.829333484173 2214040.75 11367.0 ENST00000402902.1_1_6:66803326-66803860:-|nuORF;;ENSG00000083635|ENST00000379161|NUFIP1 2.850964665412903 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11385 61.479 800.0 211530.0 25 0 26907.0 + -1 FFQDKARFY 9 163 407.8733542155784 1220.5982332469353 3 407.8730346560478 MULTI CID FTMS 0 0 0 11367 116449.0078125 1.0 0 0.0 18 Oxidation (M) _YLIVWSM(Oxidation (M))FF_ nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14 9.38312468134398 0.5871240394367778 4 {M(Oxidation (M))|F}Q{M(Oxidation (M))|F}DKARY{M(Oxidation (M))|F} 9 -1 + 43.0 0.0 0.0 3.5228 3.5228 63.417 0.0 0.0 0.0 1.9382002601611248 0.5115252244738144 0.5115252244738144 0.5115252244738144 0 0.218765315847925 0.0 0.0 0.0 {M(Oxidation (M))|F}Q{M(Oxidation (M))|F}DKARY{M(Oxidation (M))|F};{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}DKAR{M(Oxidation (M))|F}Y;[Y{I|L}][HA]AKD{M(Oxidation (M))|F}QE;[DG]RRAKD{M(Oxidation (M))|F}QE;{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}DKT[WH]{I|L};{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}AKD{M(Oxidation (M))|F}QE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}P]TKD{M(Oxidation (M))|F}QE;{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}[WK]RY{M(Oxidation (M))|F};{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}DKA[HC]{I|L}{I|L};{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}H]|[RQ]}AKD{M(Oxidation (M))|F}QE 3.5228;3.4809;3.3641;2.563;2.0342;1.9904;1.9548;1.7026;1.6852;1.6696 -;-;-;-;-;-;-;-;-;- 502 + 1 1.466 133684.9 0.6399999856948853 6674 4709 11367 HBL1_DMSO_200M_050219_2,11385 HBL1_DMSO_200M_050219_2,11385,YLIVWSMFF False False FFQDKARFY 61.479313 407.873034656048 922988.625 11367.0 nc|ENSG00000173193|Q460N5-3|PARP14;;nc|ENSG00000173193|Q460N5-1|PARP14;;ENSG00000173193|ENST00000474629|PARP14;;nc|ENSG00000173193|Q460N5-4|PARP14 4.905407587687175 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11386 61.493 800.0 284630.0 25 0 21813.0 + + 22541 IPRELLQHV 9 209 368.8896645986352 1103.6471643961056 3 368.8883544802666 MULTI CID FTMS 0 0 0 11367 118548.90625 1.0 0 0.0 19 Unmodified _LPWLLNHVL_ ENSG00000136925|ENST00000341170|TSTD2;ENST00000375173.1_1_9:100364753-100365089:-|nuORF 16.149105407346934 0.3995459350917656 4 {I|L}V[NG]V[RP]NVH 10 -1 + 21.08 0.0 0.0 1.91 1.91 62.94 0.0 0.0 0.0 6.616225017174386 1.6162250171743864 1.6162250171743864 1.76091259055681 0 0.0 0.0 0.0 0.4247425010840047 {I|L}V[NG]V[RP]NVH;{I|L}V[RN][RP]NVH;{I|L}V[NG]V[RP]NHV;{I|L}[RN]V[RP]NVH;{I|L}V[RN][RP]NHV;{I|L}[RN]V[RP]NHV;{I|L}V{[YC]|[HE]}HKKT{I|L} 1.91;1.7505;1.6575;1.5909;1.4979;1.3384;1.0677 -;-;-;-;-;-;- 162 + 1 1.466 180438.3 0.6000000238418579 6675 4709 11367 HBL1_DMSO_200M_050219_2,11386 HBL1_DMSO_200M_050219_2,11386,LPWLLNHVL False False IPRELLQHV 61.493128 368.888354480267 929993.875 11367.0 ENSG00000136925|ENST00000341170|TSTD2;;ENST00000375173.1_1_9:100364753-100365089:-|nuORF 1.4790254334608717 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11387 61.508 800.0 186020.0 25 0 19998.0 + -1 TFDGAQCMFSP 11 166 610.2423773916222 0 610.2427856326103 PEAK CID FTMS 0 0 0 11367 119481.890625 0.657678833103667 -1 0.1130142211914062 20 Oxidation (M) _TFDGAQCM(Oxidation (M))FSP_ REV__ENSG00000108179|ENST00000225174|PPIF;REV__nc|ENSG00000108179|P30405-2|PPIF 31.26834338654808 0.2152680502973705 4 {M(Oxidation (M))|F}TDYN 5 -1 22.662 0.0 0.0 1.8599 0.0 0.0 259.154645279165 316.0433748834594 575.1980201626244 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.9119543704721594 {M(Oxidation (M))|F}TDYN 1.8599 - 305 + 1 1.466 111092.3 0.8100000023841858 6676 4709 11367 HBL1_DMSO_200M_050219_2,11387 HBL1_DMSO_200M_050219_2,11387,TFDGAQCMFSP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11389 61.513 3.8 14872000.0 25 0 1077200.0 + 5900 DPYKVYRIV 9 76 384.8853134716828 1151.6341110152484 3 384.8854553103447 MULTI CID FTMS 0 0 0 11388 11712757.0 0.7550780422514672 1 -0.1017608642578125 1 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 30.63653989081413 0.1413794767160703 4 DPYKVY[R{I|L}]V 9 0 + 66.727 0.0 0.0 5.7941 5.7941 90.342 0.0 0.0 0.0 55.307420846197004 2.328441339178184 2.328441339178184 66.72740412802301 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + + DPYKVY[R{I|L}]V 5.7941 + + 73 + 1 1.466 55427.3 1.0 6677 4710 11388 HBL1_DMSO_200M_050219_2,11389 HBL1_DMSO_200M_050219_2,11389,DPYKVYRIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11390 61.514 7.2 8472200.0 25 0 696280.0 + 5904 DPYKVYRIV 9 70 576.8241678675307 1151.6337828018611 2 576.8246337771416 MULTI CID FTMS 0 0 0 11388 6582651.0 0.7130059924707428 1 -0.1017608642578125 2 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 39.94969957227396 0.0757326808254658 4 DPYKVY 6 3 63.18 0.0 0.0 5.4862 0.0 0.0 0.0 383.2426851861938 383.2426851861938 24.02108809370467 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 0.0 0.0 + DPYKVY 5.4862 + + 54 + 1 1.466 52083.0 1.0 6678 4710 11388 HBL1_DMSO_200M_050219_2,11390 HBL1_DMSO_200M_050219_2,11390,DPYKVYRIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11391 61.515 8.3 5799400.0 25 0 585590.0 + 24902 MPNTRPPII 9 64 519.791170775148 1037.567788617096 2 519.7922241091728 MULTI CID FTMS 0 0 0 11388 6717101.0 1.0 0 0.0 3 Unmodified _MPNTRPPII_ ENSG00000084774|ENST00000264705|CAD 32.78568957990786 0.1150597335874693 4 MPNTR 5 4 68.954 0.0 0.0 6.6457 0.0 0.0 0.0 435.26054310690034 435.26054310690034 54.34955642535897 0.0 0.0 0.0 0 1.0994850021680094 2.0 0.0 0.0 + MPNTR 6.6457 + + 41 + 1 1.466 46203.6 1.0 6679 4710 11388 HBL1_DMSO_200M_050219_2,11391 HBL1_DMSO_200M_050219_2,11391,MPNTRPPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11392 61.516 26.0 2728800.0 25 0 345370.0 + 19046 LDLYRLEK 8 78 525.3027503906801 1048.59094784816 2 525.3033325076103 MULTI CID FTMS 0 0 0 11388 2373292.5 0.5285373312822466 1 -0.1017608642578125 4 Unmodified _LDLYRLEK_ REV__ENSG00000174123|ENST00000308973|TLR10 18.1463463914782 0.6428359029697936 4 {I|L}DYK{I|L} 5 -1 66.454 0.0 0.0 6.3374 0.0 0.0 0.0 413.2152193658813 413.2152193658813 56.11912034618955 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {I|L}DYK{I|L} 6.3374 - 64 + 1 1.466 59662.0 1.0 6680 4710 11388 HBL1_DMSO_200M_050219_2,11392 HBL1_DMSO_200M_050219_2,11392,LDLYRLEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11393 61.517 27.0 2264000.0 25 0 211040.0 + 22636 LPYPIHQV 8 76 483.7744182518194 965.5342835704388 2 483.7747985720634 MULTI CID FTMS 0 0 0 11388 1788618.125 0.951127834292408 -2 0.2408294677734375 5 Unmodified _LPYPIHQV_ ENSG00000176444|ENST00000368361|CLK2;ENST00000416636.2_1_7:23624683-23625604:-|nuORF;ENST00000497188.1_1_1:155234069-155238352:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2 46.92087301778293 0.1537303740847981 4 {I|L}PYP{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]} 8 0 + 56.929 0.0 0.0 5.8961 5.8961 88.906 0.0 0.0 0.0 33.28418229881471 9.51163485412895 9.51163485412895 20.625466655011948 0 0.6237125054200234 1.6989700043360187 0.0 0.6747425010840047 + + {I|L}PYP{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}P{[RE]|[WV]}P{I|L}{[QN]|[E{I|L}]|[KN]};{I|L}P{[RE]|[WV]}PQ{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}[{I|L}T]QQH{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}[WR]QH{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}[{I|L}T]QH{I|L}{[QN]|[E{I|L}]|[KN]};{I|L}[{I|L}T]Q[AG]H{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}[{I|L}T][AG]QH{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}[WR][AG]H{[QV]|[N{I|L}]|[RA]|[KV]} 5.8961;3.76;3.4554;2.2447;2.075;1.3266;1.2854;1.2854;1.1087 +;-;-;-;-;-;-;-;- + 178 + 1 1.466 53722.2 1.0 6681 4710 11388 HBL1_DMSO_200M_050219_2,11393 HBL1_DMSO_200M_050219_2,11393,LPYPIHQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11394 61.518 32.0 1505900.0 25 0 252550.0 + 40508 VITEKGISDL 10 60 537.8057918725032 1073.5970308118062 2 537.8059570193291 MULTI CID FTMS 0 0 0 11388 1719982.25 0.5827615984942911 1 -0.1017608642578125 6 Unmodified _VITEKGISDL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 18.721224879955976 0.5334180411911432 4 [{I|L}V]TE 4 6 41.682 0.0 0.0 3.8825 0.0 0.0 0.0 628.3375338190061 628.3375338190061 8.016448996253459 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + [{I|L}V]TE 3.8825 + + 176 + 1 1.466 43621.4 1.0 6682 4710 11388 HBL1_DMSO_200M_050219_2,11394 HBL1_DMSO_200M_050219_2,11394,VITEKGISDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11395 61.52 62.0 1772900.0 25 0 457840.0 -1 0 91 304.1945262630192 606.3744995928384 2 304.1942016482353 MULTI CID FTMS 0 0 0 11388 1265798.25 0.4808966504825737 -2 0.2408294677734375 7 4 YA{I|L}{I|L}K 5 -1 + 65.164 0.0 0.0 10.746 10.746 86.099 0.0 0.0 0.0 36.020599913279625 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.3494850021680094 2.0 0.0 0.3252574989159953 YA{I|L}{I|L}K;YA{I|L}K{I|L};Y{I|L}A{I|L}K;Y{I|L}AK{I|L};[{I|L}A]K{I|L}Y;[K{I|L}]A{I|L}Y 10.746;10.25;5.8789;5.3825;3.1881;2.4563 -;-;-;-;-;- 50 + 1 1.466 94814.9 1.0 6683 4710 11388 HBL1_DMSO_200M_050219_2,11395 HBL1_DMSO_200M_050219_2,11395, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11396 61.521 45.0 1079500.0 25 0 107640.0 + 11046 GDAYPNGLQV 10 75 517.2509604292252 1032.4873679252505 2 517.2514526247978 MULTI CID FTMS 0 0 0 11388 1122237.375 0.3052936432170083 -2 0.2408294677734375 8 Unmodified _GDAYPNGLQV_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 19.256988751693697 0.5244284437930726 4 [NP]G{I|L}QS 6 5 19.046 0.0 0.0 1.8447 0.0 0.0 0.0 433.17099764620656 433.17099764620656 2.051368718728813 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [NP]G{I|L}QS 1.8447 - 167 1 1.466 42073.7 1.0 6684 4710 11388 HBL1_DMSO_200M_050219_2,11396 HBL1_DMSO_200M_050219_2,11396,GDAYPNGLQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11397 61.523 69.0 1021800.0 25 0 115170.0 + 5227 DIYKIREI 8 90 350.5380235689346 1048.592241307004 3 350.5377075076103 MULTI CID FTMS 0 0 0 11388 868778.875 0.6675073778722992 1 -0.1017608642578125 9 Unmodified _DIYKIREI_ ENSG00000133112|ENST00000530705|TPT1;ENST00000442760.2_1_13:45914489-45915204:-|nuORF 24.020572477871973 0.5389365498350341 4 {NN|[MP]|[D{I|L}]|[EV]}YK{I|L}{[RE]|[WV]}{I|L} 8 0 + 50.618 0.0 0.0 4.8272 4.8272 75.576 0.0 0.0 0.0 39.19817709811524 1.6522478729376289 1.6522478729376289 4.771212547196626 0 0.25 2.0 0.2614393726401688 0.4247425010840047 + + {NN|[MP]|[D{I|L}]|[EV]}YK{I|L}{[RE]|[WV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}K{[RE]|[WV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}YK{[RE]|[WV]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}{[NV]|[RG]}{[TV]|[{I|L}S]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}Y{[NV]|[RG]}{[TV]|[{I|L}S]}{I|L} 4.8272;4.3722;3.6801;2.2104;1.5183 +;-;-;-;- + 93 + 1 1.466 60381.0 1.0 6685 4710 11388 HBL1_DMSO_200M_050219_2,11397 HBL1_DMSO_200M_050219_2,11397,DIYKIREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11398 61.524 56.0 863510.0 25 0 59720.0 + 33599 SIPHEVPQI 9 80 510.2795169407015 1018.5444809482028 2 510.2799560427666 MULTI CID FTMS 0 0 0 11388 597539.4375 0.7835007436619505 -2 0.2408294677734375 10 Unmodified _SIPHEVPQI_ ENSG00000096717|ENST00000212015|SIRT1 46.020951573049366 0.0490941689151868 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EVTV[QP]{I|L} 9 4 + 46.449 0.0 0.0 4.5603 4.5603 82.277 0.0 0.0 0.0 4.137342758552691 32.95425621805954 4.137342758552691 13.828344455213028 0 0.7614393726401688 0.0 0.7742275032520141 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EVTV[QP]{I|L};[KG][YN]TV[QP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[C(Carbamidomethyl (C))K]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[QN]|[E{I|L}]|[KN]}[YG]TV[QP]{I|L};[DP][H{I|L}]TV[QP]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EV[QP]{[TV]|[{I|L}S]}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[TV]|[{I|L}S]}EV[QP]{I|L};{[QN]|[E{I|L}]|[KN]}P[HS]V[QP]{I|L} 4.5603;3.2027;3.1796;2.7764;2.4808;2.2242;2.2034;2.1377 -;-;-;-;-;-;-;- 215 1 1.466 42578.4 1.0 6686 4710 11388 HBL1_DMSO_200M_050219_2,11398 HBL1_DMSO_200M_050219_2,11398,SIPHEVPQI True True SIPHEVPQI 61.524273 510.279956042767 9805304.0 11388.0 ENSG00000096717|ENST00000212015|SIRT1 3.208121418952942 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11399 61.526 103.0 549570.0 25 0 82884.0 + + 8318 QQASHYLYV 9 85 554.7746365559221 1107.5347201786442 2 554.7748901247978 MULTI CID FTMS 0 0 0 11388 479651.625 0.6535550176085574 1 -0.1017608642578125 11 Unmodified _ERHEYIYV_ ENSG00000189306|ENST00000323013|RRP7A;ENST00000483303.1_1_22:42912068-42915792:-|nuORF;ENST00000357802.6_1_22:42973094-42978007:-|nuORF 53.57557251787612 0.1224291679108181 4 [HT]GQQY{I|L}[YV] 9 -1 + 23.623 0.0 0.0 2.1329 2.1329 66.217 0.0 0.0 0.0 4.172356950594679 7.4034053274294145 4.172356950594679 3.226825097560422 0 0.5 0.0 1.424742501084005 1.3494850021680094 [HT]GQQY{I|L}[YV];[HT]GYQQ{I|L}[YV];[AG]{M(Oxidation (M))|F}[NP]{NN|[MP]|[D{I|L}]|[EV]}{I|L}[YV];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[NP]{NN|[MP]|[D{I|L}]|[EV]}{I|L}[YV];[HT]GY{I|L}QQ[YV];[NP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}[YV];{[QN]|[E{I|L}]|[KN]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}[YV] 2.1329;1.8416;1.3424;1.0959;0.73481;0.50612;0.36192 -;-;-;-;-;-;- 120 1 1.466 50385.2 1.0 6687 4710 11388 HBL1_DMSO_200M_050219_2,11399 HBL1_DMSO_200M_050219_2,11399,ERHEYIYV False False QQASHYLYV 61.52649 554.774890124798 5751253.0 11388.0 ENSG00000189306|ENST00000323013|RRP7A;;ENST00000483303.1_1_22:42912068-42915792:-|nuORF;;ENST00000357802.6_1_22:42973094-42978007:-|nuORF 7.676425298055013 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11400 61.53 191.0 519650.0 25 0 74116.0 42299 VSSRPAPR 8 127 435.25113249996593 868.4877120667319 2 435.2510864138603 MULTI CID FTMS 0 0 0 11388 446618.90625 0.7175213246110361 3 -0.2735671997070312 12 Unmodified _VSSRPAPR_ ENST00000555903.1_1_14:90745249-90755225:-|nuORF 2.577480529830294 0.808687252328423 4 {I|L} 1 8 10.485 0.0 0.0 1.2072 0.0 0.0 737.3928614581366 0.0 737.3928614581366 0.0 0.7306401783911909 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2072 - 12 + 1 1.466 82483.9 1.0 6688 4710 11388 HBL1_DMSO_200M_050219_2,11400 HBL1_DMSO_200M_050219_2,11400,VSSRPAPR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11401 61.533 171.0 729920.0 25 0 98944.0 3806 DAILARTV 8 101 429.7556709710585 857.4967890089171 2 429.7559997439384 MULTI CID FTMS 0 0 0 11388 441913.90625 0.9004847543650563 -1 0.1278152465820312 13 Unmodified _DAILARTV_ ENSG00000172037|ENST00000305544|LAMB2 47.74868867922204 0.1498366402366518 4 {[DA]|[EG]}{I|L}{I|L}ARS{I|L} 8 2 + 66.481 0.0 0.0 7.7529 7.7529 93.841 0.0 0.0 0.0 23.97940008672037 13.416827374911051 13.416827374911051 13.416827374911051 0 1.1861818737241734 1.6989700043360187 0.3807196863200844 0.6989700043360187 {[DA]|[EG]}{I|L}{I|L}ARS{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}[WK];{[DA]|[EG]}{I|L}{I|L}[WK]{I|L} 7.7529;6.1883;6.1286 -;-;- 102 + 1 1.466 99773.1 1.0 6689 4710 11388 HBL1_DMSO_200M_050219_2,11401 HBL1_DMSO_200M_050219_2,11401,DAILARTV False True NALIARSL 61.533492 429.755999743938 0.0 11388.0 ENSG00000147604|ENST00000352983|RPL7;;ENST00000478965.1_1_5:94161779-94162088:-|nuORF -0.5080812498927116 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11402 61.538 249.0 340310.0 25 0 29294.0 + -1 NQLICSMIDS 10 122 570.2569753369836 1138.499397740767 2 570.2573119997978 MULTI CID FTMS 0 0 0 11388 397795.09375 1.0 0 0.0 14 Oxidation (M) _NQLICSM(Oxidation (M))IDS_ REV__ENSG00000197415|ENST00000362010|VEPH1;REV__nc|ENSG00000197415|Q14D04-2|VEPH1;REV__nc|ENSG00000197415|Q14D04-3|VEPH1;REV__nc|ENSG00000197415|Q14D04-4|VEPH1 36.12702656103203 0.1984647928738587 4 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}T{M(Oxidation (M))|F} 6 -1 46.999 0.0 0.0 4.1282 0.0 0.0 0.0 419.1273592584594 419.1273592584594 31.0450293571364 0.0 0.0 0.0 0 0.805462187404089 0.8538719643217619 0.8494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}T{M(Oxidation (M))|F} 4.1282 - 280 + 1 1.466 67593.8 1.0 6690 4710 11388 HBL1_DMSO_200M_050219_2,11402 HBL1_DMSO_200M_050219_2,11402,NQLICSMIDS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11403 61.544 327.0 313920.0 25 0 19620.0 + 24906 MPNTRPPII 9 148 527.7895856652177 0 527.7901489138603 PEAK CID FTMS 0 0 0 11388 213467.234375 1.0 0 0.0 15 Oxidation (M) _M(Oxidation (M))PNTRPPII_ ENSG00000084774|ENST00000264705|CAD 51.629811660486645 0.0272106947810716 4 PNTRP 5 4 28.078 0.0 0.0 2.6651 0.0 0.0 147.0335120697569 338.2087496393188 485.2422617090757 0.0 0.0 0.0 0.0 0 0.9361818737241736 0.0 0.0 0.3054621874040891 + PNTRP 2.6651 + + 162 + 1 1.466 83793.6 1.0 6691 4710 11388 HBL1_DMSO_200M_050219_2,11403 HBL1_DMSO_200M_050219_2,11403,MPNTRPPII True False MPNTRPPII 61.544086 527.79014891386 3579655.75 11388.0 ENSG00000084774|ENST00000264705|CAD 6.766534487406413 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11404 61.558 800.0 176560.0 25 0 12160.0 + -1 LFTCFTKSL 9 158 558.7923200698541 0 558.7921630740166 PEAK CID FTMS 0 0 0 11388 158542.421875 1.0 0 0.0 16 Carbamidomethyl (C) _LFTC(Carbamidomethyl (C))FTKSL_ REV__nc|ENSG00000156860|Q9HAH7-1|FBRS 23.1484247019978 0.1725298825155634 4 VTD 3 -1 18.857 0.0 0.0 1.6903 0.0 0.0 279.1672694473665 518.2396749748805 797.4069444222471 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 VTD 1.6903 - 253 + 1 1.466 109443.8 0.949999988079071 6692 4710 11388 HBL1_DMSO_200M_050219_2,11404 HBL1_DMSO_200M_050219_2,11404,LFTCFTKSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11405 61.572 800.0 444320.0 25 0 24722.0 + 33547 SILNKMEHV 9 277 357.5270791846338 1069.5594081541014 3 357.5269958376884 MULTI CID FTMS 0 0 0 11388 133101.03125 1.0 0 0.0 17 Unmodified _SILNKMEHV_ ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF;nc|ENSG00000054654|Q8WXH0|SYNE2 36.12702656103203 0.0967173616627612 4 {[TV]|[{I|L}S]}{I|L}NK 5 4 47.817 0.0 0.0 4.4708 0.0 0.0 0.0 511.19977747134993 511.19977747134993 37.53984464835638 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.5994850021680094 + {[TV]|[{I|L}S]}{I|L}NK 4.4708 + + 209 + 1 1.466 284189.8 0.6100000143051147 6693 4710 11388 HBL1_DMSO_200M_050219_2,11405 HBL1_DMSO_200M_050219_2,11405,SILNKMEHV True True SILNKMEHV 61.571731 357.526995837688 628581.3125 11388.0 ENST00000557005.1_1_14:64469755-64489638:+|nuORF;;ENSG00000054654|ENST00000555002|SYNE2;;nc|ENSG00000054654|Q8WXH0|SYNE2 4.950257778167725 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11406 61.586 800.0 352360.0 25 0 25953.0 39366 VAGSYCEAAA 10 226 471.20519372989423 0 471.2044250369072 PEAK CID FTMS 0 0 0 11388 88543.953125 1.0 0 0.0 18 Unmodified _VAGSYCEAAA_ ENST00000593466.5_1_19:17420363-17424875:+|nuORF 19.256988751693697 0.3042552096208299 4 QPD 3 10 15.674 0.0 0.0 1.6668 0.0 0.0 529.1831143366729 68.05136285953358 597.2344771962065 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1421590589602531 0.3054621874040891 QPD 1.6668 - 701 + 1 1.466 217507.5 0.6700000166893005 6694 4710 11388 HBL1_DMSO_200M_050219_2,11406 HBL1_DMSO_200M_050219_2,11406,VAGSYCEAAA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11407 61.601 800.0 91763.0 25 0 16177.0 -1 0 60 1110.4572533814908 3328.3499307446727 3 1110.793994128704 MULTI CID FTMS 0 0 0 11388 84555.5078125 0.7700202431612543 -2 0.2408294677734375 19 4 RP 2 -1 7.1227 0.0 0.0 0.214 0.0 0.0 2350.831947583365 721.3289010535225 3072.160848636888 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 RP 0.214 - 50 + 1 1.466 64416.9 0.6000000238418579 6695 4710 11388 HBL1_DMSO_200M_050219_2,11407 HBL1_DMSO_200M_050219_2,11407, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11408 61.61 510.0 383320.0 25 0 38776.0 + -1 LGLDMGTV 8 154 411.2080820323088 820.4016111314176 2 411.2086059451103 MULTI CID FTMS 0 0 0 11388 90562.9921875 0.1797831168565297 -3 0.3399162292480469 20 Oxidation (M) _LGLDM(Oxidation (M))GTV_ REV__ENSG00000140323|ENST00000267889|DISP2 9.347437153973935 0.7675937258251505 4 {I|L}T 2 -1 24.915 0.0 0.0 3.0369 0.0 0.0 0.0 603.2467118127835 603.2467118127835 13.65553405465342 0.0 0.0 0.0 0 0.1643943297944484 0.0 0.3807196863200844 0.0 {I|L}T 3.0369 - 103 + 1 1.466 155233.9 1.0 6696 4710 11388 HBL1_DMSO_200M_050219_2,11408 HBL1_DMSO_200M_050219_2,11408,LGLDMGTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11410 61.614 25.0 1914400.0 25 0 443640.0 + 33686 SIYNGDMEKI 10 71 585.2790356486043 1168.5435183640086 2 585.2792236208916 MULTI CID FTMS 0 0 0 11409 1941023.125 0.6514729036147086 1 -0.1029510498046875 1 Unmodified _SIYNGDMEKI_ ENSG00000176171|ENST00000368636|BNIP3;ENST00000550043.1_1_14:28733783-28734191:+|nuORF 21.59015148037692 0.4836074274810599 4 {[TV]|[{I|L}S]}YN[DG]MEK{I|L} 10 0 + 61.596 0.0 0.0 5.2712 5.2712 81.78 0.0 0.0 0.0 50.75898049383622 9.200660764537162 9.200660764537162 9.164539485499247 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + + {[TV]|[{I|L}S]}YN[DG]MEK{I|L};{[TV]|[{I|L}S]}YGG[DG]MEK{I|L};{[TV]|[{I|L}S]}Y[WP][KC]C(Carbamidomethyl (C)){I|L} 5.2712;4.4869;2.3844 +;-;- + 72 + 1 1.466 42773.8 1.0 6697 4711 11409 HBL1_DMSO_200M_050219_2,11410 HBL1_DMSO_200M_050219_2,11410,SIYNGDMEKI False True SIYNGDMEKI 61.614337 585.279223620892 22090190.0 11409.0 ENST00000550043.1_1_14:28733783-28734191:+|nuORF;;ENSG00000176171|ENST00000368636|BNIP3 6.810870011647542 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11411 61.616 48.0 1043400.0 25 0 170740.0 25346 NALVCDCDLM 10 74 548.7264304816301 1095.4383080300602 2 548.7274658083916 MULTI CID FTMS 0 0 0 11409 810568.9375 0.0566985105543292 3 -0.2910614013671875 2 Unmodified _NALVCDCDLM_ ENSG00000147485|ENST00000356297|PXDNL;nc|ENSG00000147485|A1KZ92-2|PXDNL 6.723162845929126 0.6955379296933136 4 {[QG]|[NA]}{[QS]|[NT]}K 5 8 28.557 0.0 0.0 2.6069 0.0 0.0 0.0 564.1616106025789 564.1616106025789 17.29745883207972 0.0 0.0 0.0 0 0.5 2.0 0.6989700043360187 0.0 {[QG]|[NA]}{[QS]|[NT]}K 2.6069 - 64 1 1.466 46097.3 1.0 6698 4711 11409 HBL1_DMSO_200M_050219_2,11411 HBL1_DMSO_200M_050219_2,11411,NALVCDCDLM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11412 61.617 17.0 3131600.0 25 0 629640.0 -1 VTEMQDSFV 9 77 536.2384689389298 1070.4623849446596 2 536.2391845583916 MULTI CID FTMS 0 0 0 11409 2433615.0 0.6957278581885744 -1 0.1017608642578125 3 Oxidation (M) _VTEM(Oxidation (M))QDSFV_ ENSG00000180347|ENST00000615280|ITPRID1;nc|ENSG00000180347|Q6ZRS4-2|ITPRID1;nc|ENSG00000180347|Q6ZRS4-3|ITPRID1;nc|ENSG00000180347|Q6ZRS4-4|ITPRID1 12.531546534597751 0.4974689918368763 4 {[TV]|[{I|L}S]}DPT 5 -1 43.94 0.0 0.0 4.1048 0.0 0.0 0.0 554.1962465992095 554.1962465992095 30.84121882396211 0.0 0.0 0.0 0 0.0 2.0 0.7742275032520141 0.0 {[TV]|[{I|L}S]}DPT 4.1048 - 102 1 1.466 48168.7 1.0 6699 4711 11409 HBL1_DMSO_200M_050219_2,11412 HBL1_DMSO_200M_050219_2,11412,VTEMQDSFV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11413 61.619 83.0 558310.0 25 0 62236.0 + 45772 YYITNDTVQTY 11 68 690.8190431786885 1379.623533424177 2 690.8199340701103 MULTI CID FTMS 0 0 0 11409 817919.125 0.0691848955454309 3 -0.2910614013671875 4 Unmodified _YYITNDTVQTY_ ENSG00000144028|ENST00000323853|SNRNP200 22.736283301280096 0.5583477779825423 4 YYSV{I|L} 5 8 32.932 0.0 0.0 2.387 0.0 0.0 0.0 751.2953223248206 751.2953223248206 3.234002963358406 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 YYSV{I|L} 2.387 - 511 1 1.466 40789.5 1.0 6700 4711 11409 HBL1_DMSO_200M_050219_2,11413 HBL1_DMSO_200M_050219_2,11413,YYITNDTVQTY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11414 61.62 58.0 746590.0 25 0 119310.0 + 17850 KQLDENISL 9 68 530.2869160242687 1058.5592791153374 2 530.2881347537041 MULTI CID FTMS 0 0 0 11409 712340.625 1.0 0 0.0 5 Unmodified _KQLDENISL_ ENSG00000119285|ENST00000366582|HEATR1 32.78568957990786 0.1150597335874693 4 [Q{I|L}]KDEN{I|L}S{I|L} 9 2 + 44.759 0.0 0.0 4.2283 4.2283 71.297 0.0 0.0 0.0 3.2568864632742844 29.27494066097715 3.2568864632742844 3.4678748622465605 0 0.8182503180159344 0.0 0.0 0.8494850021680094 [Q{I|L}]KDEN{I|L}S{I|L};[{I|L}A]GKDEN{I|L}S{I|L};[Q{I|L}]KDEGG{I|L}S{I|L};[{I|L}A]GKDEGG{I|L}S{I|L};[KA]{[VA]|[{I|L}G]}DEN{I|L}S{I|L};[Q{I|L}]KC(Carbamidomethyl (C))[TP]{I|L}S{I|L};[Q{I|L}]WWN{I|L}S{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[K{I|L}]EN{I|L}S{I|L};[{I|L}A]GKC(Carbamidomethyl (C))[TP]{I|L}S{I|L};[{I|L}A]GWWN{I|L}S{I|L} 4.2283;3.9007;3.3585;3.035;2.9825;2.8594;2.6982;2.6234;2.5318;2.3655 -;-;-;-;-;-;-;-;-;- 150 1 1.466 38743.7 1.0 6701 4711 11409 HBL1_DMSO_200M_050219_2,11414 HBL1_DMSO_200M_050219_2,11414,KQLDENISL True True KQLDENISL 61.620154 530.288134753704 5835136.0 11409.0 ENSG00000119285|ENST00000366582|HEATR1 5.076467831929524 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11415 61.622 75.0 612670.0 25 0 38397.0 + 22158 LPPSALQSV 9 74 456.26346091798274 910.5123689027656 2 456.2633239626884 MULTI CID FTMS 0 0 0 11409 577541.875 0.4105615977685551 10 -0.8704910278320312 6 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 34.10243960390752 0.1078313939113124 4 [{I|L}P]{[SA]|[TG]}P{I|L}QSV 9 2 + 43.139 0.0 0.0 4.7379 4.7379 72.391 0.0 0.0 0.0 6.143644969955076 9.889917747712644 6.143644969955076 3.0102999566398125 0 0.7742275032520141 1.6989700043360187 0.3054621874040891 0.0 [{I|L}P]{[SA]|[TG]}P{I|L}QSV;[{I|L}P]{[SA]|[TG]}PQ{I|L}SV;[PS]AP{I|L}{I|L}QSV;[PS]A{I|L}P{I|L}QSV;[PS]AP{I|L}Q{I|L}SV;[{I|L}P]{[SA]|[TG]}P{I|L}[AG]SV;[PS]A{I|L}PQ{I|L}SV;[{I|L}P]{[SA]|[TG]}P[AG]{I|L}SV;[PS]AP{I|L}{I|L}[AG]SV;[PS]A{I|L}P{I|L}[AG]SV 4.7379;4.4072;4.0631;3.7325;3.7325;3.7265;3.4019;3.3959;3.0518;2.7212 -;-;-;-;-;-;-;-;-;- 172 1 1.466 44513.1 1.0 6702 4711 11409 HBL1_DMSO_200M_050219_2,11415 HBL1_DMSO_200M_050219_2,11415,LPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11416 61.623 58.0 649830.0 25 0 65541.0 + -1 VSDWILMPL 9 65 545.287245236472 0 545.2855102419853 PEAK CID FTMS 0 0 0 11409 545805.0625 1.0 0 0.0 7 Oxidation (M) _VSDWILM(Oxidation (M))PL_ REV__ENSG00000124216|ENST00000244050|SNAI1 7.910154910731844 0.3362437653303669 4 Q{I|L} 2 -1 15.217 0.0 0.0 1.3979 0.0 0.0 202.13057859556176 642.2568783588449 844.3874569544066 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Q{I|L} 1.3979 - 18 + 1 1.466 39856.2 1.0 6703 4711 11409 HBL1_DMSO_200M_050219_2,11416 HBL1_DMSO_200M_050219_2,11416,VSDWILMPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11417 61.625 97.0 641390.0 25 0 79134.0 + 25348 NANRIPVI 8 99 448.7692478157065 895.523942698213 2 448.7696411013603 MULTI CID FTMS 0 0 0 11409 425299.125 1.0 0 0.0 8 Unmodified _NANRIPVI_ ENSG00000115760|ENST00000421745|BIRC6 46.92087301778293 0.1537303740847981 4 [VP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[VP]{I|L} 8 3 + 32.654 0.0 0.0 3.6464 3.6464 67.074 0.0 0.0 0.0 2.230749808046326 8.416375079047498 2.230749808046326 2.230749808046326 0 0.3252574989159953 1.5228787452803376 0.0 0.7059771852360797 [VP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[VP]{I|L};{[QG]|[NA]}[RN]{I|L}[VP]{I|L};[{I|L}P][MN]{I|L}[VP]{I|L};[VP]N[QA][RV]{I|L} 3.6464;3.3973;3.1707;1.4293 -;+;-;- + 107 1 1.466 54585.4 1.0 6704 4711 11409 HBL1_DMSO_200M_050219_2,11417 HBL1_DMSO_200M_050219_2,11417,NANRIPVI False True NANRIPVI 61.625443 448.76964110136 4552618.0 11409.0 ENSG00000115760|ENST00000421745|BIRC6 4.119600137074788 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11418 61.627 88.0 640100.0 25 0 47288.0 + 13838 HVADMLVKV 9 106 506.2863050090887 1010.5580570849776 2 506.2860290408134 MULTI CID FTMS 0 0 0 11409 376254.8125 1.0 0 0.0 9 Unmodified _HVADMLVKV_ ENSG00000106144|ENST00000310447|CASP2;ENST00000472067.1_1_7:143000848-143002161:+|nuORF;ENST00000493642.5_1_7:142991831-143002161:+|nuORF 30.63653989081413 0.1413794767160703 4 VH 2 8 37.563 0.0 0.0 3.717 0.0 0.0 0.0 771.4155367486936 771.4155367486936 10.634774380371042 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.0 0.0 VH 3.717 - 246 + 1 1.466 52217.4 1.0 6705 4711 11409 HBL1_DMSO_200M_050219_2,11418 HBL1_DMSO_200M_050219_2,11418,HVADMLVKV False True HVADMLVKV 61.627395 506.286029040813 2705589.25 11409.0 ENSG00000106144|ENST00000310447|CASP2;;ENST00000493642.5_1_7:142991831-143002161:+|nuORF;;ENST00000472067.1_1_7:143000848-143002161:+|nuORF 5.423319498697917 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11419 61.629 96.0 667670.0 25 0 58833.0 + 31302 RLYQGINQL 9 98 552.8112355908678 1103.6079182485355 2 552.8115112185478 MULTI CID FTMS 0 0 0 11409 371532.84375 1.0 0 0.0 10 Unmodified _RLYQGINQL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 24.020572477871973 0.2255576514309169 4 QG{I|L}NQ{I|L} 6 3 41.77 0.0 0.0 3.7848 0.0 0.0 432.2485829084 0.0 432.2485829084 0.0 24.346980859148324 0.0 0.0 0 0.5138793319624578 0.0 0.0 0.0 + QG{I|L}NQ{I|L} 3.7848 + + 640 1 1.466 55521.1 1.0 6706 4711 11409 HBL1_DMSO_200M_050219_2,11419 HBL1_DMSO_200M_050219_2,11419,RLYQGINQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11420 61.632 128.0 601590.0 25 0 70442.0 5713 DPLGWTNLLC 10 101 566.2800491237548 1130.5455453143095 2 566.2807494997978 MULTI CID FTMS 0 0 0 11409 327971.21875 0.9677049015567069 1 -0.1029510498046875 11 Unmodified _DPLGWTNLLC_ ENST00000265801.6_2_8:20104052-20104400:-|nuORF 19.256988751693697 0.5244284437930726 4 [DP]{I|L} 3 7 30.819 0.0 0.0 2.726 0.0 0.0 0.0 802.3582643907345 802.3582643907345 6.52224853964567 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.2887254899964357 0.0 + [DP]{I|L} 2.726 + + 266 1 1.466 62972.5 1.0 6707 4711 11409 HBL1_DMSO_200M_050219_2,11420 HBL1_DMSO_200M_050219_2,11420,DPLGWTNLLC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11421 61.636 192.0 410870.0 25 0 22563.0 23455 LTGGLIEPQV 10 112 513.7956155953715 1025.5766782575429 2 513.7958251833916 MULTI CID FTMS 0 0 0 11409 266077.71875 0.8221786468644379 2 -0.1718063354492187 12 Unmodified _LTGGLIEPQV_ nc|ENSG00000151914|Q03001-3|DST 34.40172386719151 0.2166836008404837 4 {[QN]|[E{I|L}]|[KN]}Q[{I|L}T]VPQV 9 5 + 39.126 0.0 0.0 3.8151 3.8151 67.993 0.0 0.0 0.0 6.568043921522538 3.01029995663982 3.01029995663982 2.503859178250792 0 0.6549471895720985 2.0 0.3807196863200844 0.75 {[QN]|[E{I|L}]|[KN]}Q[{I|L}T]VPQV;{[QN]|[E{I|L}]|[KN]}[WR]VPQV;{[QN]|[E{I|L}]|[KN]}Q[{I|L}T]VPN{I|L};{[QN]|[E{I|L}]|[KN]}[WR]VPN{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}M[VP]VQPV;{[RE]|[WV]}G{[QN]|[E{I|L}]|[KN]}VQPV;{[QN]|[E{I|L}]|[KN]}[AG][{I|L}T]VPQV;[RD]A{[QN]|[E{I|L}]|[KN]}VQPV;{[QN]|[E{I|L}]|[KN]}Q[{I|L}T]VQPV;RRSNAVQPV 3.8151;3.5709;3.5215;3.2774;3.1746;2.9545;2.9172;2.8327;2.7953;2.6528 -;-;-;-;-;-;-;-;-;- 2540 + 1 1.466 66994.4 1.0 6708 4711 11409 HBL1_DMSO_200M_050219_2,11421 HBL1_DMSO_200M_050219_2,11421,LTGGLIEPQV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11422 61.643 412.0 345030.0 25 0 45836.0 + 22235 LPRGKGIRLTI 11 110 408.6029577526986 1222.787043858296 3 408.6031066775322 MULTI CID FTMS 0 0 0 11409 201414.109375 1.0 0 0.0 13 Unmodified _LPRGKGIRLTI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2;ENST00000470671.1_1_X:71475533-71493153:-|nuORF;ENST00000479057.1_1_17:560036-560321:-|nuORF;ENST00000480755.1_1_19:9793972-9794221:-|nuORF 39.41278653710922 0.2214416661041839 4 {I|L}PR 3 8 33.37 0.0 0.0 2.729 0.0 0.0 0.0 853.5279024713499 853.5279024713499 11.178098496014584 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.4247425010840047 + {I|L}PR 2.729 + + 93 + 1 1.466 114519.6 1.0 6709 4711 11409 HBL1_DMSO_200M_050219_2,11422 HBL1_DMSO_200M_050219_2,11422,LPRGKGIRLTI False True LPRGKGIRLTI 61.643177 408.603106677532 1405938.75 11409.0 ENST00000479057.1_1_17:560036-560321:-|nuORF;;ENSG00000198034|ENST00000316084|RPS4X;;ENST00000480755.1_1_19:9793972-9794221:-|nuORF;;ENST00000470671.1_1_X:71475533-71493153:-|nuORF;;ENSG00000280969|ENST00000629237|RPS4Y2 5.74407418568929 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11423 61.649 330.0 282360.0 25 0 25527.0 -1 0 134 466.2659961766482 465.2587197100482 1 466.2651244997978 MULTI CID FTMS 0 0 0 11409 167332.875 0.0135992294742163 14 -1.3527679443359375 14 4 TV 2 -1 17.563 0.0 0.0 3.7749 0.0 0.0 247.1315662450076 0.0 247.1315662450076 0.0 3.5834938564822494 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 TV 3.7749 - 74 + 1 1.466 76031.8 1.0 6710 4711 11409 HBL1_DMSO_200M_050219_2,11423 HBL1_DMSO_200M_050219_2,11423, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11424 61.663 800.0 237000.0 25 0 7613.3 + 28719 RVLPPSALQSVA 12 141 619.3665310440224 1236.7185091548447 2 619.3680297732353 MULTI CID FTMS 0 0 0 11409 142733.234375 0.9562952313724292 -7 0.7360763549804688 15 Unmodified _PVTAPRVRWR_ nc|ENSG00000178999|Q96GD4-4|AURKB;ENSG00000178999|ENST00000585124|AURKB;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB 13.90604991867851 0.6142120002215601 4 [VP]TA{I|L}[PA]A{I|L}QSG{I|L} 13 8 + 47.173 0.0 0.0 3.8143 3.8143 67.207 0.0 0.0 0.0 2.0285689931386486 7.07818883976087 2.0285689931386486 2.0285689931386486 0 0.3957012980088059 0.744727494896694 1.7856668758921828 0.0 [VP]TA{I|L}[PA]A{I|L}QSG{I|L};{[TV]|[{I|L}S]}PA{I|L}[PA]A{I|L}QSG{I|L};[{I|L}P]SA{I|L}[PA]A{I|L}QSG{I|L};[VS][HV]VKA{I|L}QSG{I|L};[VP]TA{I|L}[PA]A{I|L}[AG]SG{I|L};{[TV]|[{I|L}S]}PA{I|L}[PA]A{I|L}[AG]SG{I|L};[PS]{I|L}A{I|L}[PA]A{I|L}QSG{I|L};[VP][EP]VKA{I|L}QSG{I|L};[{I|L}P]SA{I|L}[PA]A{I|L}[AG]SG{I|L};[{I|L}A][PS]{I|L}[PA]A{I|L}QSG{I|L} 3.8143;3.6503;3.2555;3.216;3.0808;2.9167;2.7167;2.5868;2.5219;2.5148 -;-;-;-;-;-;-;-;-;- 958 1 1.466 141733.7 0.8500000238418579 6711 4711 11409 HBL1_DMSO_200M_050219_2,11424 HBL1_DMSO_200M_050219_2,11424,PVTAPRVRWR False False RVLPPSALQSVA 61.663001 619.368029773235 1384116.0 11409.0 nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;nc|ENSG00000178999|Q96GD4-2|AURKB 5.402503967285156 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11425 61.677 800.0 255370.0 25 0 13693.0 + 5966 DQQLEFLNEI 10 177 624.8104561954568 1247.6063594577136 2 624.8118774294853 MULTI CID FTMS 0 0 0 11409 93163.734375 0.1326137815796506 -3 0.34259033203125 16 Unmodified _DQQLEFLNEI_ ENSG00000123607|ENST00000243344|TTC21B;ENST00000464374.5_1_2:166785584-166810215:-|nuORF;nc|ENSG00000123607|Q7Z4L5-2|TTC21B 100.0907132914201 0.0086105052902417 4 [AG]D{I|L}E{M(Oxidation (M))|F}{I|L}QNE{I|L} 11 4 + 106.49 0.0 0.0 8.5352 8.5352 90.889 0.0 0.0 0.0 11.211594541730063 16.575773191777927 11.211594541730063 8.043709860534761 0 1.031234684152075 1.5228787452803376 2.293157681736544 0.7614393726401688 [AG]D{I|L}E{M(Oxidation (M))|F}{I|L}QNE{I|L};[AG]D{I|L}E{M(Oxidation (M))|F}Q{I|L}NE{I|L};[AG]D{I|L}E{M(Oxidation (M))|F}{I|L}QGGE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{M(Oxidation (M))|F}{I|L}QNE{I|L};[AG]D{I|L}E{M(Oxidation (M))|F}{I|L}[AG]NE{I|L};[AG]VEE{M(Oxidation (M))|F}{I|L}QNE{I|L};[AG]{M(Oxidation (M))|F}{I|L}ED{I|L}QNE{I|L};[AG]D{I|L}E{I|L}{M(Oxidation (M))|F}QNE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EE{M(Oxidation (M))|F}{I|L}QNE{I|L};[AG]{I|L}DE{M(Oxidation (M))|F}{I|L}QNE{I|L} 8.5352;7.8904;7.8035;7.6365;7.4983;7.4754;7.3514;7.3297;7.2609;7.2438 -;-;-;-;-;-;-;-;-;- 9559 1 1.466 158642.2 0.75 6712 4711 11409 HBL1_DMSO_200M_050219_2,11425 HBL1_DMSO_200M_050219_2,11425,DQQLEFLNEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11426 61.691 800.0 128650.0 25 0 8441.5 + 34389 SLTYPIRVIHY 11 131 681.3829943267871 0 681.2968627810478 PEAK CID FTMS 0 0 0 11409 22026.099609375 0.3404117192040544 -1 0.1017608642578125 17 Unmodified _SLTYPIRVIHY_ REV__ENSG00000174946|ENST00000309180|GPR171 8.745405648335112 0.4618489994582195 4 {M(Oxidation (M))|F}AQQS 5 -1 33.927 0.0 0.0 2.4933 0.0 0.0 326.2912400225792 470.1733492486938 796.464589271273 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0356668758921828 1.7302046884880935 {M(Oxidation (M))|F}AQQS 2.4933 - 370 + 1 1.466 75558.6 0.7300000190734863 6713 4711 11409 HBL1_DMSO_200M_050219_2,11426 HBL1_DMSO_200M_050219_2,11426,SLTYPIRVIHY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11427 61.706 800.0 163250.0 25 0 9511.3 + + 9091 GQWPQDAEAVQRV 13 133 742.3675450207343 1482.7205371082684 2 742.3724853396416 MULTI CID FTMS 0 0 0 11409 97793.8046875 0.7698282665731216 9 -0.7864761352539062 18 Unmodified _FFHIRQWFSCL_ ENSG00000165271|ENST00000297990|NOL6;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6 5.731851221503515 0.8481046878870278 4 {[QG]|[NA]}WPQDAEA 9 -1 51.393 0.0 0.0 3.4661 0.0 0.0 0.0 497.2830599420532 497.2830599420532 27.89381281052492 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.4247425010840047 {[QG]|[NA]}WPQDAEA 3.4661 - 1189 + 1 1.466 98701.8 0.699999988079071 6714 4711 11409 HBL1_DMSO_200M_050219_2,11427 HBL1_DMSO_200M_050219_2,11427,FFHIRQWFSCL False False GQWPQDAEAVQRV 61.705966 742.372485339642 1591119.875 11409.0 ENSG00000165271|ENST00000297990|NOL6;;nc|ENSG00000165271|Q9H6R4-2|NOL6;;nc|ENSG00000165271|Q9H6R4-4|NOL6 7.213999112447103 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11428 61.713 385.0 260790.0 25 0 24890.0 27412 PINANASFI 9 134 473.7527893747261 945.4910258162522 2 473.7521545290947 MULTI CID FTMS 0 0 0 11409 89270.109375 0.4797497096916917 -1 0.1017608642578125 19 Unmodified _PINANASFI_ ENSG00000176542|ENST00000316407|USF3 30.22481116460888 0.1466181017706357 4 {[QG]|[NA]}{I|L}PNA 6 7 25.424 0.0 0.0 2.6889 0.0 0.0 0.0 362.1700076633338 362.1700076633338 1.4710960616822604 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.9674165578762486 {[QG]|[NA]}{I|L}PNA 2.6889 - 567 1 1.466 79828.0 1.0 6715 4711 11409 HBL1_DMSO_200M_050219_2,11428 HBL1_DMSO_200M_050219_2,11428,PINANASFI False True YAPINANAI 61.712866 473.752154529095 1882400.375 11409.0 ENSG00000149480|ENST00000278823|MTA2;;nc|ENSG00000149480|O94776-2|MTA2 1.7008680601914723 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11430 61.717 23.0 2341900.0 25 0 249700.0 + 21814 LPNKVDPLV 9 90 497.8004901100049 993.5864272868098 2 497.8004028201103 MULTI CID FTMS 0 0 0 11429 1534576.0 0.9485541485483072 1 -0.0688552856445312 1 Unmodified _LPNKVDPLV_ ENSG00000087191|ENST00000310144|PSMC5;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;ENST00000581764.1_1_17:61907522-61908306:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5 37.97399986684836 0.0865783450051559 4 [{I|L}P]QVTQP{I|L}V 9 4 + 65.222 0.0 0.0 6.5643 6.5643 80.341 0.0 0.0 0.0 21.760912590556813 14.09256854528806 14.09256854528806 3.187587626244124 0 0.6694451763165201 2.0 0.4247425010840047 0.0 [{I|L}P]QVTQP{I|L}V;[{I|L}P]Q{[QS]|[NT]}{I|L}P{I|L}V;[{I|L}P][AG]VTQP{I|L}V;[{I|L}P]QVT[AG]P{I|L}V;[{I|L}P][AG]{[QS]|[NT]}{I|L}P{I|L}V;[{I|L}P][AG]VT[AG]P{I|L}V;[Q{I|L}]PVTQP{I|L}V;[Q{I|L}]P{[QS]|[NT]}{I|L}P{I|L}V;[Q{I|L}]{[TV]|[{I|L}S]}PQP{I|L}V;[Q{I|L}]PVT[AG]P{I|L}V 6.5643;6.2435;5.6375;5.6375;5.3167;4.7152;4.3742;4.0533;3.8761;3.4474 -;-;-;-;-;-;-;-;-;- 294 1 1.467 50742.8 1.0 6716 4712 11429 HBL1_DMSO_200M_050219_2,11430 HBL1_DMSO_200M_050219_2,11430,LPNKVDPLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11431 61.718 32.0 1217300.0 25 0 161320.0 + 3905 DALDVANKI 9 74 479.7639217668962 957.5132906005924 2 479.7642394900322 MULTI CID FTMS 0 0 0 11429 873612.125 0.0497385531178284 4 -0.3470382690429687 2 Unmodified _DALDVANKI_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;ENST00000491601.1_1_17:38595721-38595772:-|nuORF 34.40172386719151 0.1061884637610825 4 NDVANK{I|L} 7 3 41.279 0.0 0.0 4.3111 0.0 0.0 185.0864850359424 0.0 185.0864850359424 0.0 26.71024155191085 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 NDVANK{I|L} 4.3111 - 124 + 1 1.467 36037.6 1.0 6717 4712 11429 HBL1_DMSO_200M_050219_2,11431 HBL1_DMSO_200M_050219_2,11431,DALDVANKI True True DALDVANKI 61.718468 479.764239490032 375959616.0 11429.0 ENST00000471152.1_2_3:161146917-161147007:-|nuORF;;ENSG00000198242|ENST00000422514|RPL23A;;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;;ENST00000491601.1_1_17:38595721-38595772:-|nuORF;;ENST00000467573.1_1_21:40499576-40499963:+|nuORF 7.33245325088501 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11432 61.72 15.0 2758300.0 25 0 355230.0 + 4541 DAYPNGLQV 9 73 488.740857420368 975.467161907536 2 488.7411682009697 MULTI CID FTMS 0 0 0 11429 2981379.0 0.935178505109108 -1 0.1029510498046875 3 Unmodified _DAYPNGLQV_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 20.453626601364224 0.2830276176381075 4 [NP]G{I|L}Q 5 4 20.856 0.0 0.0 2.1381 0.0 0.0 0.0 463.18347595466406 463.18347595466406 3.421110615943679 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.3494850021680094 + [NP]G{I|L}Q 2.1381 + + 79 1 1.467 37372.3 1.0 6718 4712 11429 HBL1_DMSO_200M_050219_2,11432 HBL1_DMSO_200M_050219_2,11432,DAYPNGLQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11433 61.721 46.0 1533500.0 25 0 148010.0 + 3913 DALEKIKAI 9 110 500.8068256964762 999.5990984597524 2 500.8077270388603 MULTI CID FTMS 0 0 0 11429 970016.9375 0.3053684769060858 -2 0.2047119140625 4 Unmodified _DALEKIKAI_ ENSG00000130177|ENST00000356221|CDC16;nc|ENSG00000130177|Q13042-2|CDC16;nc|ENSG00000130177|Q13042-3|CDC16;nc|ENSG00000130177|Q13042-4|CDC16 67.83816525789305 0.0219346420158844 4 DA{I|L}EK{I|L}KA{I|L} 9 0 + 100.28 0.0 0.0 10.032 10.032 98.615 0.0 0.0 0.0 40.4402281476392 13.46787486224656 13.46787486224656 33.69911285071794 0 2.1989700043360187 2.0 0.3494850021680094 0.0 + + DA{I|L}EK{I|L}KA{I|L};{[DA]|[EG]}{I|L}EK{I|L}KA{I|L};DA{I|L}EKVVKV;{[QN]|[E{I|L}]|[KN]}GEK{I|L}KA{I|L};{[QN]|[E{I|L}]|[KN]}KKA{I|L}GE{I|L};{[SA]|[TG]}V{I|L}KA{I|L}GE{I|L};[{I|L}A]DEK{I|L}KA{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}KAGE{I|L};{[QN]|[E{I|L}]|[KN]}KK{I|L}AGE{I|L};{[SA]|[TG]}{I|L}VKA{I|L}GE{I|L} 10.032;6.6604;6.4764;4.9044;4.8553;4.5083;4.3813;4.1733;4.1733;4.0231 +;+;-;-;-;-;-;-;-;- + 1509 + 1 1.467 59073.1 1.0 6719 4712 11429 HBL1_DMSO_200M_050219_2,11433 HBL1_DMSO_200M_050219_2,11433,DALEKIKAI True True DALEKIKAI 61.720886 500.80772703886 18198770.0 11429.0 ENSG00000130177|ENST00000356221|CDC16;;nc|ENSG00000130177|Q13042-3|CDC16;;chr13:114259398-114272278|24|34.25|0.66|5.7|+|0|CDC16,None|1;;nc|ENSG00000130177|Q13042-2|CDC16;;nc|ENSG00000130177|Q13042-4|CDC16 4.466850996017456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11434 61.723 98.0 824960.0 25 0 92896.0 + 24745 MPFDPSKV 8 96 460.73043413808574 919.4463153429716 2 460.7309448122978 MULTI CID FTMS 0 0 0 11429 804232.6875 0.8731611175725761 1 -0.0688552856445312 5 Unmodified _MPFDPSKV_ ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB 53.832793166522166 0.1212192986213991 4 MP{M(Oxidation (M))|F}DPSKV 8 0 + 80.932 0.0 0.0 8.8022 8.8022 97.284 0.0 0.0 0.0 47.458741588435615 12.184290373512042 12.184290373512042 25.0888654023152 0 1.5941876774005248 1.6989700043360187 0.3807196863200844 0.1989700043360188 + + MP{M(Oxidation (M))|F}DPSKV;MP{M(Oxidation (M))|F}DV[VG]GV;MP{M(Oxidation (M))|F}DV[QA]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MDPSKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DPSMKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DMPSKV;MP{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R]P{I|L};MP[EC][{I|L}T]KV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[WE]KV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}DPSKV 8.8022;6.0735;5.7987;4.711;4.5087;4.4946;4.2304;4.1041;3.0555;2.7334 +;-;-;-;-;-;-;-;-;+ + 446 + 1 1.467 68126.6 1.0 6720 4712 11429 HBL1_DMSO_200M_050219_2,11434 HBL1_DMSO_200M_050219_2,11434,MPFDPSKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11435 61.724 40.0 1108200.0 25 0 77545.0 + 33204 SFIQGTTTM 9 79 493.2367377439071 984.4589225546142 2 493.2359802126884 MULTI CID FTMS 0 0 0 11429 799987.5625 0.2009369490238896 -3 0.3325271606445312 6 Unmodified _SFIQGTTTM_ ENSG00000165501|ENST00000298288|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF 15.847184025352805 0.4077185912009129 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}V 5 6 26.031 0.0 0.0 2.6442 0.0 0.0 0.0 388.1200913380705 388.1200913380705 2.843181179205061 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}V 2.6442 - 93 1 1.467 36961.0 1.0 6721 4712 11429 HBL1_DMSO_200M_050219_2,11435 HBL1_DMSO_200M_050219_2,11435,SFIQGTTTM False True SFIQGTTTM 61.72418 493.235980212688 56850076.0 11429.0 ENST00000540712.1_1_14:50068361-50081211:+|nuORF;;ENSG00000165501|ENST00000298288|LRR1 3.490310629208883 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11436 61.726 70.0 776370.0 25 0 38200.0 + 8113 EPHQVYVQI 9 90 556.7901851660614 1111.5658173989227 2 556.7905761599541 MULTI CID FTMS 0 0 0 11429 755874.8125 0.4089550354266602 -2 0.2047119140625 7 Unmodified _EPHQVYVQI_ ENSG00000085840|ENST00000371568|ORC1 41.8396318013385 0.0653578398400075 4 [AG]VHPEYVQ{I|L} 10 5 + 51.799 0.0 0.0 4.66 4.66 51.144 0.0 0.0 0.0 9.456423376774069 9.457640437841874 9.456423376774069 0.0 0 0.5682503180159344 1.5228787452803376 1.3807196863200843 0.0 [AG]VHPEYVQ{I|L};[AG]HVPEYVQ{I|L};[AG]{I|L}{[{M(Oxidation (M))|F}C]|[YS]}VYVQ{I|L};[AG]VHYPEVQ{I|L};[AG]HVYPEVQ{I|L};[AG]HVPYEVQ{I|L};[AG]VHPYEVQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}HPEYVQ{I|L};[HQ]VPEYVQ{I|L};[AG]H[EP]VYVQ{I|L} 4.66;4.66;4.3673;4.3226;4.3226;4.0518;4.0518;3.8093;3.8093;3.7385 -;-;-;-;-;-;-;-;-;- 640 1 1.467 50067.1 1.0 6722 4712 11429 HBL1_DMSO_200M_050219_2,11436 HBL1_DMSO_200M_050219_2,11436,EPHQVYVQI True True EPHQVYVQI 61.725838 556.790576159954 31088518.0 11429.0 ENSG00000085840|ENST00000371568|ORC1 6.347875595092773 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11437 61.727 54.0 797080.0 25 0 100210.0 -1 QNQAKRCTV 9 76 552.7826801518345 1103.5508073704689 2 552.7826415896416 MULTI CID FTMS 0 0 0 11429 720791.0625 0.8535674228780044 -1 0.1029510498046875 8 Carbamidomethyl (C) _QNQAKRC(Carbamidomethyl (C))TV_ ENSG00000147383|ENST00000370274|NSDHL 16.942295170755138 0.3780752226737986 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}GQ[{I|L}T]TV 10 -1 + 40.232 0.0 0.0 3.6456 3.6456 69.562 0.0 0.0 0.0 5.764837301042718 6.28388930050312 5.764837301042718 3.521825181113627 0 1.0 0.0 0.2887254899964357 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}GQ[{I|L}T]TV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}G[WR]TV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}GQ[{I|L}T]S{I|L};{[TV]|[{I|L}S]}D{NN|[MP]|[D{I|L}]|[EV]}DTVKV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GG{I|L}GQ[{I|L}T]TV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}G[AG][{I|L}T]TV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}G[WR]S{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GG{I|L}G[WR]TV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}G[AG][{I|L}T]S{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GG{I|L}GQ[{I|L}T]S{I|L} 3.6456;3.3265;3.0762;3.0185;2.8152;2.8152;2.7571;2.4921;2.2458;2.2458 -;-;-;-;-;-;-;-;-;- 243 + 1 1.467 39625.4 1.0 6723 4712 11429 HBL1_DMSO_200M_050219_2,11437 HBL1_DMSO_200M_050219_2,11437,QNQAKRCTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11438 61.729 74.0 824260.0 25 0 105850.0 + 28598 PVALAAEVL 9 80 441.7683182352048 881.5220835372097 2 441.7682067751884 MULTI CID FTMS 0 0 0 11429 709555.625 0.7961417082857465 8 -0.6835250854492188 9 Unmodified _PVALAAEVL_ REV__ENSG00000108479|ENST00000588479|GALK1;REV__ENST00000586733.1_1_17:73754139-73754584:-|nuORF 23.1484247019978 0.2366544122328345 4 VPAE 4 -1 51.414 0.0 0.0 5.8325 0.0 0.0 0.0 482.3101290338501 482.3101290338501 36.81031895404267 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VPAE 5.8325 - 171 + 1 1.467 54161.4 1.0 6724 4712 11429 HBL1_DMSO_200M_050219_2,11438 HBL1_DMSO_200M_050219_2,11438,PVALAAEVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11439 61.731 75.0 745600.0 25 0 91810.0 -1 0 66 632.9779281392716 1895.9119550180149 3 632.9783203005791 MULTI CID FTMS 0 0 0 11429 701320.5625 1.0 0 0.0 10 4 G{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 7 -1 34.979 0.0 0.0 1.845 0.0 0.0 1095.491502830275 0.0 1095.491502830275 0.0 12.760394762458134 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 1.845 - 121 1 1.467 50889.7 1.0 6725 4712 11429 HBL1_DMSO_200M_050219_2,11439 HBL1_DMSO_200M_050219_2,11439, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11440 61.732 70.0 1365000.0 25 0 126430.0 + 3770 DAHIYLNHI 9 97 365.85799082968674 1094.5521430892602 3 365.8574401736259 MULTI CID FTMS 0 0 0 11429 644298.125 0.0276991284228707 -4 0.4455413818359375 11 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 57.72198328787511 0.0273433238377839 4 [HA]D{I|L}Y{I|L}N{I|L}H 9 4 [HA]D + + 53.402 14.71 4.5524 4.8789 4.8789 51.972 0.0 0.0 0.0 0.0 30.179885689367275 0.0 0.0 0 1.424742501084005 0.0 0.0 0.7302046884880937 [HA]D{I|L}Y{I|L}N{I|L}H 4.8789 - 278 + 1 1.467 80569.0 1.0 6726 4712 11429 HBL1_DMSO_200M_050219_2,11440 HBL1_DMSO_200M_050219_2,11440,DAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11441 61.734 71.0 914310.0 25 0 98412.0 + 16767 KFYNAGLAY 9 86 523.7696301165489 0 523.7694579958916 PEAK CID FTMS 0 0 0 11429 449768.03125 0.4605442780275492 -2 0.2047119140625 12 Unmodified _KFYNAGLAY_ ENSG00000072042|ENST00000381346|RDH11;ENST00000553578.5_1_14:68152963-68157118:-|nuORF;nc|ENSG00000072042|Q8TC12-2|RDH11 36.04419817259434 0.0811646137502998 4 A{I|L}Q 3 7 29.781 0.0 0.0 2.8485 0.0 0.0 181.07888842316 549.2478731744749 730.3267615976349 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 1.1861818737241734 A{I|L}Q 2.8485 - 33 + 1 1.467 51543.6 1.0 6727 4712 11429 HBL1_DMSO_200M_050219_2,11441 HBL1_DMSO_200M_050219_2,11441,KFYNAGLAY True True KFYNAGLAY 61.734032 523.769457995892 23196908.0 11429.0 nc|ENSG00000072042|Q8TC12-2|RDH11;;ENST00000553578.5_1_14:68152963-68157118:-|nuORF;;ENSG00000072042|ENST00000381346|RDH11 1.506744662920634 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11442 61.736 81.0 1040700.0 25 0 121620.0 1374 ALAEEVRKL 9 100 343.5416404516298 1027.6030919550894 3 343.5412780642509 MULTI CID FTMS 0 0 0 11429 468419.25 1.0 0 0.0 13 Unmodified _ALAEEVRKL_ ENSG00000065618|ENST00000648076|COL17A1;nc|ENSG00000065618|Q9UMD9-2|COL17A1 25.399314129420983 0.2080152500878129 4 AA{I|L} 3 6 28.939 0.0 0.0 2.8162 0.0 0.0 0.0 769.423135126129 769.423135126129 8.00399024272103 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 AA{I|L} 2.8162 - 181 + 1 1.467 71715.9 1.0 6728 4712 11429 HBL1_DMSO_200M_050219_2,11442 HBL1_DMSO_200M_050219_2,11442,ALAEEVRKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11443 61.737 28.0 1742900.0 25 0 189760.0 + 22767 LQPSLQPGGP 10 84 497.2738833159297 0 497.2731201052666 PEAK CID FTMS 0 0 0 11429 388395.9375 1.0 0 0.0 14 Unmodified _LQPSLQPGGP_ REV__ENSG00000167566|ENST00000335999|NCKAP5L;REV__nc|ENSG00000167566|Q9HCH0-2|NCKAP5L 15.248480904072842 0.3349989633518451 4 PQTVQ 5 -1 23.711 0.0 0.0 2.389 0.0 0.0 229.11027393472324 207.1144655817016 436.2247395164249 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 PQTVQ 2.389 - 163 + 1 1.467 43048.7 1.0 6729 4712 11429 HBL1_DMSO_200M_050219_2,11443 HBL1_DMSO_200M_050219_2,11443,LQPSLQPGGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11444 61.741 188.0 533550.0 25 0 44241.0 + 31901 RTVEAFLKEA 10 119 582.3240525077965 1162.633552082393 2 582.3248779177666 MULTI CID FTMS 0 0 0 11429 341225.9375 1.0 0 0.0 15 Unmodified _RTVEAFLKEA_ ENSG00000119718|ENST00000266126|EIF2B2;ENST00000555522.1_1_14:75469672-75471687:+|nuORF 12.35033696204008 0.6403153526215293 4 {[QN]|[E{I|L}]|[KN]}G[VS]A{M(Oxidation (M))|F}{I|L}KEA 11 4 + 58.646 0.0 0.0 5.0442 5.0442 70.931 0.0 0.0 0.0 2.0164536352806905 16.575773191777934 2.0164536352806905 1.6466179727489916 0 0.7302046884880937 0.958607314841775 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}G[VS]A{M(Oxidation (M))|F}{I|L}KEA;{[QN]|[E{I|L}]|[KN]}[WK]{M(Oxidation (M))|F}{I|L}KEA;{[DA]|[EG]}{I|L}[VS]A{M(Oxidation (M))|F}{I|L}KEA;{[CP]|[EA]}V[VS]A{M(Oxidation (M))|F}{I|L}KEA;[{I|L}T]DRA{M(Oxidation (M))|F}{I|L}KEA;[K{I|L}][WE]{M(Oxidation (M))|F}{I|L}KEA;{[HG]|PP}[YK]A{M(Oxidation (M))|F}{I|L}KEA;{[TV]|[{I|L}S]}ERA{M(Oxidation (M))|F}{I|L}KEA;A{M(Oxidation (M))|F}K{I|L}{M(Oxidation (M))|F}A[VS]S{[HG]|PP};[K{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}P{I|L}KEA 5.0442;4.9026;4.8708;4.7375;4.1913;4.1855;4.0781;4.0754;3.4637;2.9136 -;-;-;-;-;-;-;-;-;- 555 1 1.467 85241.4 1.0 6730 4712 11429 HBL1_DMSO_200M_050219_2,11444 HBL1_DMSO_200M_050219_2,11444,RTVEAFLKEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11445 61.743 114.0 1267000.0 25 0 148980.0 39367 VAGTDCQSFS 10 116 507.714231407894 1013.413909882588 2 507.7137328982353 MULTI CID FTMS 0 0 0 11429 333168.4375 0.3547322094380004 -1 0.1029510498046875 16 Unmodified _VAGTDCQSFS_ ENST00000402038.3_10:51087802-51093273:-|nuORF 13.90604991867851 0.6142120002215601 4 VQ 2 8 23.803 0.0 0.0 2.3488 0.0 0.0 0.0 783.2641393847334 783.2641393847334 2.834281652289512 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.3807196863200844 VQ 2.3488 - 259 + 1 1.467 117046.0 1.0 6731 4712 11429 HBL1_DMSO_200M_050219_2,11445 HBL1_DMSO_200M_050219_2,11445,VAGTDCQSFS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11446 61.747 190.0 422230.0 25 0 60664.0 + + 7531 IQIMKVEEI 9 111 560.3113174190072 1118.6080819048143 2 559.8104736208916 MULTI CID FTMS 0 0 0 11429 190132.0 0.1018478169747611 -4 0.4455413818359375 17 Unmodified _EIDKLQRAF_ ENSG00000105640|ENST00000222247|RPL18A;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 22.736283301280096 0.2418982879461534 4 {[QN]|[E{I|L}]|[KN]}DK{I|L}{M(Oxidation (M))|F}{I|L}E{I|L} 9 -1 + 57.418 0.0 0.0 5.133 5.133 53.074 0.0 0.0 0.0 7.889180660303694 9.375758612822054 7.889180660303694 0.0 0 0.5 0.6989700043360187 1.035666875892183 0.0 {[QN]|[E{I|L}]|[KN]}DK{I|L}{M(Oxidation (M))|F}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}DK{M(Oxidation (M))|F}{I|L}{I|L}E{I|L};{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]{I|L}E{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}EK{I|L}{M(Oxidation (M))|F}{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}EK{M(Oxidation (M))|F}{I|L}{I|L}E{I|L};[Q{I|L}]{I|L}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}{I|L}E{I|L};{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]E{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}DK{I|L}T{I|L}[C(Carbamidomethyl (C))K];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}K{I|L}{M(Oxidation (M))|F}{I|L}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}K{M(Oxidation (M))|F}{I|L}{I|L}E{I|L} 5.133;5.133;4.4277;4.1284;4.1284;3.9132;3.6609;3.6546;3.4517;3.4517 -;-;-;-;-;-;-;-;-;- 1722 1 1.467 66711.2 1.0 6732 4712 11429 HBL1_DMSO_200M_050219_2,11446 HBL1_DMSO_200M_050219_2,11446,EIDKLQRAF False False IQIMKVEEI 61.746715 559.810473620892 53138620.0 11429.0 ENSG00000105640|ENST00000222247|RPL18A;;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 2.872329910596212 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11447 61.761 800.0 152190.0 25 0 14836.0 -1 0 119 949.467536839446 0 949.4661743044852 PEAK CID FTMS 0 0 0 11429 176704.34375 0.5772091687683863 -14 1.4031257629394531 18 4 {I|L}ANA 4 -1 11.285 0.0 0.0 0.5949 0.0 0.0 983.453126802136 541.2401827447874 1524.6933095469233 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.819341519366547 {I|L}ANA 0.5949 - 1443 + 1 1.467 83436.9 0.8700000047683716 6733 4712 11429 HBL1_DMSO_200M_050219_2,11447 HBL1_DMSO_200M_050219_2,11447, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11448 61.768 411.0 297700.0 25 0 44888.0 21171 LPCHALPG 8 145 404.21348938541 806.4124258376199 2 404.2133056521416 MULTI CID FTMS 0 0 0 11429 166628.96875 1.0 0 0.0 19 Unmodified _LPCHALPG_ ENST00000216160.10_1_22:39822838-39826082:+|nuORF 6.354104778181461 0.7857632046190106 4 {I|L} 1 7 11.783 0.0 0.0 1.4611 0.0 0.0 675.3173768647669 0.0 675.3173768647669 0.0 2.396518287104435 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4611 + + 52 + 1 1.467 97935.4 1.0 6734 4712 11429 HBL1_DMSO_200M_050219_2,11448 HBL1_DMSO_200M_050219_2,11448,LPCHALPG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11449 61.782 800.0 328230.0 25 0 15241.0 33161 SEWKKGCEV 9 212 533.25592138816 1064.49728984312 2 533.2562744021416 MULTI CID FTMS 0 0 0 11429 174939.421875 1.0 0 0.0 20 Unmodified _SEWKKGCEV_ ENSG00000120563|ENST00000649382|LYZL1;nc|ENSG00000120563|Q6UWQ5-2|LYZL1 32.30548876998284 0.1201446275138228 4 [{I|L}V]STEAMSEV 10 8 + 63.153 0.0 0.0 5.9327 5.9327 80.845 0.0 0.0 0.0 5.324985759318025 16.53212513775344 5.324985759318025 5.324985759318025 0 0.5356668758921829 1.6989700043360187 0.6861818737241735 0.0 [{I|L}V]STEAMSEV;[VS]{I|L}TEAMSEV;[{I|L}V][WM]AMSEV;{[TV]|[{I|L}S]}VTEAMSEV;[R{M(Oxidation (M))|F}]PEAMSEV;[{I|L}V]S[PG]{M(Oxidation (M))|F}MSEV;{NN|[MP]|[D{I|L}]|[EV]}[KP]{M(Oxidation (M))|F}MSEV;{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}AMSEV;[VS]{I|L}[PG]{M(Oxidation (M))|F}MSEV;[{I|L}V]STEA{[CP]|[EA]}{M(Oxidation (M))|F}V 5.9327;5.4324;4.908;4.8198;4.7881;4.6624;4.4279;4.2392;4.1622;4.0749 -;-;-;-;-;-;-;-;-;- 3201 1 1.467 203239.5 0.9300000071525574 6735 4712 11429 HBL1_DMSO_200M_050219_2,11449 HBL1_DMSO_200M_050219_2,11449,SEWKKGCEV True False RLMEAMSEV 61.78173 533.256274402142 1163710.625 11429.0 nc|ENSG00000184056|Q9H267-2|VPS33B;;ENSG00000184056|ENST00000333371|VPS33B 4.249926408131917 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11451 61.786 54.0 1182100.0 25 0 81924.0 + 5901 DPYKVYRIV 9 81 384.8853134716828 1151.6341110152484 3 384.8850890994072 MULTI CID FTMS 0 0 0 11450 908666.875 0.0585783863725473 4 -0.3379440307617187 1 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 30.63653989081413 0.1413794767160703 4 DPYKVY[R{I|L}]V 9 0 + 64.804 0.0 0.0 5.6271 5.6271 89.636 0.0 0.0 0.0 52.58532514725495 2.420299789533402 2.420299789533402 64.80381264341851 0 0.2742275032520141 1.6989700043360187 0.0 0.0 + + DPYKVY[R{I|L}]V 5.6271 + + 71 + 1 1.467 60793.2 1.0 6736 4713 11450 HBL1_DMSO_200M_050219_2,11451 HBL1_DMSO_200M_050219_2,11451,DPYKVYRIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11452 61.8 800.0 141640.0 25 0 18415.0 -1 0 122 966.8739043943896 1931.7332558555788 2 967.3746826052666 MULTI CID FTMS 0 0 0 11450 95303.4140625 0.7626295046474196 1 -0.1192550659179687 2 4 {[DS]|[MA]|[CV]|TT}{[QV]|[N{I|L}]|[RA]|[KV]}YVT 7 -1 31.431 0.0 0.0 1.6271 0.0 0.0 0.0 1136.3067781546602 1136.3067781546602 12.712710060089837 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.5114393726401687 0.3252574989159953 {[DS]|[MA]|[CV]|TT}{[QV]|[N{I|L}]|[RA]|[KV]}YVT 1.6271 - 5777 1 1.467 77262.8 0.800000011920929 6737 4713 11450 HBL1_DMSO_200M_050219_2,11452 HBL1_DMSO_200M_050219_2,11452, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11453 61.801 20.0 4334500.0 25 0 645860.0 + 3773 DAHIYLNHI 9 97 548.2829931927653 1094.5514334523305 2 548.2830688357353 MULTI CID FTMS 0 0 0 11450 2549983.75 0.1366039207825065 -3 0.2735671997070312 3 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 96.93554129104106 0.0121609977933358 4 {[DA]|[EG]}H{I|L}Y{I|L}NH{I|L} 9 0 + 88.696 0.0 0.0 8.1034 8.1034 86.608 0.0 0.0 0.0 43.97148302778982 14.07831620036704 14.07831620036704 4.660677999045717 0 2.7302046884880937 1.0457574905606752 0.0 1.816901560044258 + + {[DA]|[EG]}H{I|L}Y{I|L}NH{I|L};{[DA]|[EG]}H{I|L}{I|L}YNH{I|L};[H{I|L}]DAY{I|L}NH{I|L};[HA]D{I|L}Y{I|L}NH{I|L};[H{I|L}]DAY{I|L}GGH{I|L};[HA]D{I|L}Y{I|L}GGH{I|L};{[DA]|[EG]}H{I|L}Y{I|L}GGH{I|L};{[DA]|[EG]}H{I|L}{I|L}YGGH{I|L};[H{I|L}]D{I|L}YANH{I|L};[H{I|L}]D{I|L}YAGGH{I|L} 8.1034;7.6776;6.862;6.4495;6.0207;5.6082;5.6022;5.4152;5.2764;4.4352 +;-;-;-;-;-;-;-;-;- + 602 + 1 1.467 70186.8 1.0 6738 4713 11450 HBL1_DMSO_200M_050219_2,11453 HBL1_DMSO_200M_050219_2,11453,DAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11454 61.802 30.0 1560700.0 25 0 188920.0 + 4330 DASAPRLMV 9 69 480.2518492078556 958.4891454825112 2 480.2514831423759 MULTI CID FTMS 0 0 0 11450 906897.0 0.474276562749124 -2 0.1718063354492187 4 Unmodified _DASAPRLMV_ ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 25.399314129420983 0.2080152500878129 4 {[DA]|[EG]}SA 4 5 44.693 0.0 0.0 4.6628 0.0 0.0 0.0 611.3342431058725 611.3342431058725 16.136671203378867 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + {[DA]|[EG]}SA 4.6628 + + 34 + 1 1.467 44356.7 1.0 6739 4713 11450 HBL1_DMSO_200M_050219_2,11454 HBL1_DMSO_200M_050219_2,11454,DASAPRLMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11455 61.806 191.0 561740.0 25 0 42214.0 40042 VGGEGPGH 8 93 709.3263481404599 708.3190716738599 1 709.3264037966728 MULTI CID FTMS 0 0 0 11450 455223.15625 0.8543890963012178 1 -0.1192550659179687 5 Unmodified _VGGEGPGH_ ENST00000333055.8_1_5:180235733-180235895:-|nuORF 5.760428011301431 0.7893668129297577 4 {[TV]|[{I|L}S]}MEMV 6 6 + 74.403 0.0 0.0 10.504 10.504 89.064 0.0 0.0 0.0 4.784175351584722 16.197887582883936 4.784175351584722 4.784175351584722 0 1.5 1.5228787452803376 1.6549471895720984 0.0 {[TV]|[{I|L}S]}MEMV;VTMEMV;[MT]VEMV;{[TV]|[{I|L}S]}EMMV;[MT]EVMV;{NN|[MP]|[D{I|L}]|[EV]}MTMV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TVMV;{NN|[MP]|[D{I|L}]|[EV]}TMMV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VTMV;[MT]EMVV 10.504;9.8287;9.4516;9.267;8.8012;8.1424;7.7498;7.7453;7.5601;7.4036 -;-;-;-;-;-;-;-;-;- 338 1 1.467 82083.1 1.0 6740 4713 11450 HBL1_DMSO_200M_050219_2,11455 HBL1_DMSO_200M_050219_2,11455,VGGEGPGH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11456 61.81 182.0 519110.0 25 0 44365.0 + 37268 TIPDGGVHIV 10 127 504.2794948903664 1006.5444368475328 2 504.2791931033134 MULTI CID FTMS 0 0 0 11450 213665.6875 0.8717500869065975 2 -0.1987838745117187 6 Unmodified _TIPDGGVHIV_ ENSG00000244462|ENST00000374114|RBM12;ENST00000352393.8_2_20:34220804-34246883:-|nuORF;ENST00000440240.5_1_20:34220804-34252800:-|nuORF;ENST00000454607.5_1_20:34220607-34246883:-|nuORF 34.10243960390752 0.2198439752719791 4 [{I|L}T]PD{[NV]|[RG]}H{I|L}V 9 2 + 45.234 0.0 0.0 4.494 4.494 70.422 0.0 0.0 0.0 25.307802886139545 2.498774732165998 2.498774732165998 2.498774732165998 0 0.3807196863200844 2.0 0.2887254899964357 0.0 [{I|L}T]PD{[NV]|[RG]}H{I|L}V;[{I|L}T]PD{[NV]|[RG]}HV{I|L};[{I|L}T][{I|L}T]D[KT]C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KT]D[{I|L}T]PV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[KC][{I|L}T]PV 4.494;4.2458;1.8756;1.363;1.0639 -;-;-;-;- 344 + 1 1.467 75845.9 1.0 6741 4713 11450 HBL1_DMSO_200M_050219_2,11456 HBL1_DMSO_200M_050219_2,11456,TIPDGGVHIV False True TIPDGGVHIV 61.809563 504.279193103313 8527653.0 11450.0 ENST00000454607.5_1_20:34220607-34246883:-|nuORF;;ENST00000440240.5_1_20:34220804-34252800:-|nuORF;;ENSG00000244462|ENST00000374114|RBM12;;ENST00000352393.8_2_20:34220804-34246883:-|nuORF 5.325446208318074 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11457 61.823 784.0 178860.0 25 0 12544.0 -1 0 138 688.2920981923858 2061.8544651773573 3 688.2933227419853 MULTI CID FTMS 0 0 0 11450 212136.265625 0.9174233126264084 -1 0.0688552856445312 7 4 [YQ]{I|L}ENY[NS]YCCE{I|L}AH{[NV]|[RG]} 17 -1 [YQ]{I|L}E + + 38.123 17.039 3.1954 1.849 1.849 44.483 0.0 0.0 0.0 0.0 12.432250317394669 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.6861818737241735 [YQ]{I|L}ENY[NS]YCCE{I|L}AH{[NV]|[RG]} 1.849 - 3055 + 1 1.467 126343.2 1.0 6742 4713 11450 HBL1_DMSO_200M_050219_2,11457 HBL1_DMSO_200M_050219_2,11457, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11458 61.828 257.0 556620.0 25 0 41958.0 + 30056 QVADQMWQA 9 148 538.7449023865931 1075.4752518399862 2 538.7451049685478 MULTI CID FTMS 0 0 0 11450 217554.9375 1.0 0 0.0 8 Unmodified _QVADQMWQA_ ENSG00000137207|ENST00000372422|YIPF3;ENST00000460903.2_1_6:43483331-43484545:-|nuORF;ENST00000502714.1_1_6:43481208-43483845:-|nuORF;ENST00000510102.5_1_6:43481178-43483845:-|nuORF 65.23502041540118 0.0231836506122253 4 [QA]DVQMWQA 9 2 + 27.634 0.0 0.0 2.5694 2.5694 61.952 0.0 0.0 0.0 0.7918124604762511 5.290456128172004 0.7918124604762511 0.7918124604762511 0 0.309894379144197 0.0 1.066901560044258 1.055462187404089 [QA]DVQMWQA;{[CP]|[EA]}NVQMWQA;{[DA]|[EG]}QVQMWQA;{[QV]|[N{I|L}]|[RA]|[KV]}{[DA]|[EG]}QMWQA;[QP]{[MG]|[TS]}QMWQA;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}QMWQA;{[QD]|[EN]|[WG]|[KD]|[RS]}AVQMWQA;[QA]DV[AG]MWQA;[QA]DVQM{[DA]|[EG]}QA;{[DA]|[EG]}GAVQMWQA 2.5694;2.4958;2.3961;2.3201;2.3156;2.2778;2.251;1.7132;1.7132;1.6812 -;-;-;+;-;-;-;-;-;- + 867 1 1.467 110376.1 1.0 6743 4713 11450 HBL1_DMSO_200M_050219_2,11458 HBL1_DMSO_200M_050219_2,11458,QVADQMWQA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11459 61.842 800.0 328760.0 25 0 184820.0 -1 MCLDTAVTP 9 52 1007.4509153342908 1006.4436388676908 1 1007.446826159954 MULTI CID FTMS 0 0 0 11450 184801.296875 0.4426707389254306 -1 0.0688552856445312 9 Carbamidomethyl (C) _MC(Carbamidomethyl (C))LDTAVTP_ ENST00000496773.1_1_21:11039429-11058260:-|nuORF 7.289230182591677 0.6602208344931196 4 PM 2 -1 13.812 0.0 0.0 1.3724 0.0 0.0 760.3282948224625 0.0 760.3282948224625 0.0 9.83288122256525 0.0 0.0 0 0.0 0.0 0.0 0.0 PM 1.3724 - 20 1 1.467 175815.0 0.8899999856948853 6744 4713 11450 HBL1_DMSO_200M_050219_2,11459 HBL1_DMSO_200M_050219_2,11459,MCLDTAVTP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11460 61.856 800.0 215080.0 25 0 11110.0 -1 IMCDFCEVQ 9 174 572.7284105694773 1143.4422682057543 2 572.7296020388603 MULTI CID FTMS 0 0 0 11450 179870.0625 1.0 0 0.0 10 Carbamidomethyl (C) _IMC(Carbamidomethyl (C))DFCEVQ_ ENST00000381222.8_2_X:2405824-2406046:-|nuORF 12.531546534597751 0.4974689918368763 4 [VG]{I|L}AT 5 -1 29.494 0.0 0.0 2.5794 0.0 0.0 0.0 699.1607490009295 699.1607490009295 4.176900905975884 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3252574989159953 0.0 [VG]{I|L}AT 2.5794 - 607 1 1.467 132071.1 0.959999978542328 6745 4713 11450 HBL1_DMSO_200M_050219_2,11460 HBL1_DMSO_200M_050219_2,11460,IMCDFCEVQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11461 61.86 117.0 568600.0 25 0 61044.0 + 2378 AQMDYYGTRL 10 67 609.2847853388813 1216.5550177445623 2 609.2836791872978 MULTI CID FTMS 0 0 0 11450 156274.171875 0.1289018748610008 -2 0.1718063354492187 11 Unmodified _AQMDYYGTRL_ ENSG00000157020|ENST00000350697|SEC13;ENST00000397099.1_1_3:10357003-10360966:-|nuORF;ENST00000397102.5_1_3:10355120-10362775:-|nuORF;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 28.23362336080872 0.3343390635154222 4 [QA]MDYYGT[R{I|L}] 10 0 [QA] + + 40.923 21.025 10.56 3.3638 3.3638 46.827 0.0 0.0 0.0 0.0 26.943284706245905 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + + [QA]MDYYGT[R{I|L}] 3.3638 + + 78 + 1 1.467 55617.5 1.0 6746 4713 11450 HBL1_DMSO_200M_050219_2,11461 HBL1_DMSO_200M_050219_2,11461,AQMDYYGTRL False True AQMDYYGTRL 61.859538 609.286 20161592.0 11450.0 ENSG00000157020|ENST00000350697|SEC13;;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;;ENST00000397102.5_1_3:10355120-10362775:-|nuORF;;nc|ENSG00000157020|P55735-2|SEC13;;ENST00000397099.1_1_3:10357003-10360966:-|nuORF;;nc|ENSG00000157020|P55735-4|SEC13;;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;;nc|ENSG00000157020|P55735-3|SEC13 7.451738039652507 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11462 61.873 800.0 302770.0 25 0 22186.0 + -1 FVAEGGPEL 9 116 918.45973322589 0 918.4548217654228 PEAK CID FTMS 0 0 0 11450 135358.84375 0.5891686799339296 -1 0.0688552856445312 12 ENSG00000105705|ENST00000247001|SUGP1;ENST00000588731.6_1_19:19387459-19414804:-|nuORF 4 {I|L}DAEGGP 7 -1 44.571 0.0 0.0 2.429 0.0 0.0 935.4608199050429 257.1147554986938 1192.5755754037366 0.0 0.0 0.0 0.0 0 0.0 0.0 1.360924374808178 0.0 {I|L}DAEGGP 2.429 - 3115 + 1 1.467 158017.8 0.8100000023841858 6747 4713 11450 HBL1_DMSO_200M_050219_2,11462 HBL1_DMSO_200M_050219_2,11462, False False FVAEGGPEL 61.873386 918.454821765423 1908622.875 11450.0 ENSG00000105705|ENST00000247001|SUGP1;;ENST00000588731.6_1_19:19387459-19414804:-|nuORF 10.372207641601562 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11463 61.887 800.0 193230.0 25 0 6947.5 -1 VFQTCDINAFL 11 137 664.3240567718195 1326.633560610439 2 664.3253051638603 MULTI CID FTMS 0 0 0 11450 135577.75 0.7277894029812189 -1 0.0688552856445312 13 Carbamidomethyl (C) _VFQTC(Carbamidomethyl (C))DINAFL_ ENSG00000174358|ENST00000304460|SLC6A19 17.11289562659939 0.6791789249425932 4 [DN]{M(Oxidation (M))|F}VK[PG]T[CS]{M(Oxidation (M))|F}{I|L} 12 -1 + 56.295 0.0 0.0 4.2435 4.2435 80.429 0.0 0.0 0.0 21.96149961609265 11.840601887269564 11.840601887269564 12.028937514676484 0 1.174742501084005 0.0 1.1237125054200234 0.0 [DN]{M(Oxidation (M))|F}VK[PG]T[CS]{M(Oxidation (M))|F}{I|L};[DN]V{M(Oxidation (M))|F}K[PG]T[CS]{M(Oxidation (M))|F}{I|L};[DN]{M(Oxidation (M))|F}VK[WC(Carbamidomethyl (C))]V{M(Oxidation (M))|F}{I|L};[DN]{M(Oxidation (M))|F}VK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[DA]|[EG]}{M(Oxidation (M))|F}{I|L};[DN]V{M(Oxidation (M))|F}K[WC(Carbamidomethyl (C))]V{M(Oxidation (M))|F}{I|L};[DN]{M(Oxidation (M))|F}VK[PG]T[YG]{[ET]|[MV]};[DN]{M(Oxidation (M))|F}VK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}{[DA]|[EG]}{I|L};[DN]{M(Oxidation (M))|F}V[WH][H{I|L}]{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V][DN][WC(Carbamidomethyl (C))]KV{M(Oxidation (M))|F}{I|L};[TP][YN][WC(Carbamidomethyl (C))]KV{M(Oxidation (M))|F}{I|L} 4.2435;3.3368;3.1951;2.7279;2.6085;2.2942;2.198;2.0427;1.9197;1.8467 -;-;-;-;-;-;-;-;-;- 670 + 1 1.467 115973.9 0.8999999761581421 6748 4713 11450 HBL1_DMSO_200M_050219_2,11463 HBL1_DMSO_200M_050219_2,11463,VFQTCDINAFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11464 61.901 800.0 146250.0 25 0 11608.0 + 14651 IIMENGKVVGV 11 150 579.8321952681139 0 579.8314086794853 PEAK CID FTMS 0 0 0 11450 122297.796875 1.0 0 0.0 14 Unmodified _IIMENGKVVGV_ ENSG00000203879|ENST00000447750|GDI1;ENST00000471972.1_1_X:153668686-153669692:+|nuORF;ENST00000476540.1_1_X:153669338-153670248:+|nuORF;ENST00000491154.1_1_X:153669338-153669692:+|nuORF 23.78978130925829 0.3054658308107615 4 M 1 10 7.3464 0.0 0.0 0.63459 0.0 0.0 226.16981580134888 797.4123018854124 1023.5821176867612 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + M 0.63459 + + 99 + 1 1.467 90055.5 0.8899999856948853 6749 4713 11450 HBL1_DMSO_200M_050219_2,11464 HBL1_DMSO_200M_050219_2,11464,IIMENGKVVGV False True IIMENGKVVGV 61.901048 579.831408679485 1254295.0 11450.0 ENST00000471972.1_1_X:153668686-153669692:+|nuORF;;ENST00000491154.1_1_X:153669338-153669692:+|nuORF;;ENST00000476540.1_1_X:153669338-153670248:+|nuORF;;ENSG00000203879|ENST00000447750|GDI1 5.117505709330241 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11466 61.905 14.0 3648200.0 25 0 366480.0 + 24903 MPNTRPPII 9 70 519.791170775148 1037.567788617096 2 519.7922851443291 MULTI CID FTMS 0 0 0 11465 4053014.25 0.6033874211508804 4 -0.3050270080566406 1 Unmodified _MPNTRPPII_ ENSG00000084774|ENST00000264705|CAD 41.8396318013385 0.0653578398400075 4 MPNTR 5 4 66.983 0.0 0.0 6.4557 0.0 0.0 0.0 435.26250368627694 435.26250368627694 52.37842840780033 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.7742275032520141 + MPNTR 6.4557 + + 40 + 1 1.465 46682.7 1.0 6750 4714 11465 HBL1_DMSO_200M_050219_2,11466 HBL1_DMSO_200M_050219_2,11466,MPNTRPPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11467 61.907 27.0 1407400.0 25 0 120080.0 + 11047 GDAYPNGLQV 10 76 517.2509604292252 1032.4873679252505 2 517.2514526247978 MULTI CID FTMS 0 0 0 11465 1547447.875 0.4209679787640004 2 -0.1589279174804687 2 Unmodified _GDAYPNGLQV_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 19.256988751693697 0.5244284437930726 4 QV 2 8 14.222 0.0 0.0 1.3774 0.0 0.0 787.3491823557175 0.0 787.3491823557175 0.0 2.848950402420268 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 + QV 1.3774 + + 72 + 1 1.465 35169.9 1.0 6751 4714 11465 HBL1_DMSO_200M_050219_2,11467 HBL1_DMSO_200M_050219_2,11467,GDAYPNGLQV False True GDAYPNGLQV 61.906577 517.251452624798 57427916.0 11465.0 ENSG00000117298|ENST00000374893|ECE1;;nc|ENSG00000117298|P42892-3|ECE1;;nc|ENSG00000117298|P42892-4|ECE1;;ENST00000526194.5_1_1:21560049-21616919:-|nuORF 5.404785950978597 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11468 61.908 59.0 1063200.0 25 0 94979.0 + 22637 LPYPIHQV 8 83 483.7744182518194 965.5342835704388 2 483.7744323611259 MULTI CID FTMS 0 0 0 11465 1013449.4375 0.5389188196078658 2 -0.1589279174804687 3 Unmodified _LPYPIHQV_ ENSG00000176444|ENST00000368361|CLK2;ENST00000416636.2_1_7:23624683-23625604:-|nuORF;ENST00000497188.1_1_1:155234069-155238352:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2 56.541270873467816 0.1144128637334507 4 {I|L}PY[{I|L}P]H{[QV]|[N{I|L}]|[RA]|[KV]} 8 0 + 60.115 0.0 0.0 6.2261 6.2261 90.91 0.0 0.0 0.0 33.459996503943245 8.656724351228306 8.656724351228306 28.83417202263438 0 1.079689690656103 1.5228787452803376 0.0 0.7134679910804405 + + {I|L}PY[{I|L}P]H{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}P[H{I|L}]{M(Oxidation (M))|F}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]HQ[KS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}[{I|L}T]QHQ{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}[{I|L}T]QQH{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}[{I|L}T]QH{I|L}{[QN]|[E{I|L}]|[KN]};{I|L}[WR]HQ{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}[WR]QH{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]H[AG][KS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KS][KS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.2261;3.2398;2.8848;2.6705;2.6468;2.573;2.5008;2.4771;1.9255;1.8544 +;-;-;-;-;-;-;-;-;- + 384 + 1 1.465 55696.2 1.0 6752 4714 11465 HBL1_DMSO_200M_050219_2,11468 HBL1_DMSO_200M_050219_2,11468,LPYPIHQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11469 61.909 42.0 1244500.0 25 0 225230.0 + -1 LSDITDFCT 9 91 536.2384689389298 1070.4623849446596 2 536.2401611208916 MULTI CID FTMS 0 0 0 11465 942819.25 0.2695354924511305 2 -0.1589279174804687 4 Carbamidomethyl (C) _LSDITDFC(Carbamidomethyl (C))T_ REV__ENSG00000198796|ENST00000361673|ALPK2 15.847184025352805 0.4077185912009129 4 {[TV]|[{I|L}S]}DPT 5 -1 42.065 0.0 0.0 3.9296 0.0 0.0 0.0 554.1955141773345 554.1955141773345 25.86696871556164 0.0 0.0 0.0 0 0.0 2.0 0.5866968715561641 0.0 {[TV]|[{I|L}S]}DPT 3.9296 - 132 1 1.465 48126.6 1.0 6753 4714 11465 HBL1_DMSO_200M_050219_2,11469 HBL1_DMSO_200M_050219_2,11469,LSDITDFCT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11470 61.911 59.0 1032000.0 25 0 242720.0 + 11701 GLGGRGKTVG 10 74 451.2665726454106 0 451.2667419314384 PEAK CID FTMS 0 0 0 11465 771175.8125 0.557119800046091 2 -0.1589279174804687 5 Unmodified _GLGGRGKTVG_ REV__ENSG00000115257|ENST00000300954|PCSK4;REV__ENST00000441747.6_1_19:1482202-1488015:-|nuORF 7.289230182591677 0.3953776778296116 4 Y 1 -1 5.4846 0.0 0.0 0.60904 0.0 0.0 297.2163595468774 437.2182711236938 734.4346306705712 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.60904 - 5 + 1 1.465 54041.0 1.0 6754 4714 11465 HBL1_DMSO_200M_050219_2,11470 HBL1_DMSO_200M_050219_2,11470,GLGGRGKTVG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11471 61.913 94.0 893930.0 25 0 93349.0 + 41621 VPPPLAKAI 9 98 453.2945236289187 904.5744943246374 2 453.2946349978447 MULTI CID FTMS 0 0 0 11465 745493.0 0.549397812337063 -3 0.2910614013671875 6 Unmodified _VPPPLAKAI_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;ENST00000588913.5_1_19:10244345-10246231:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 34.10243960390752 0.1078313939113124 4 VPP[{I|L}P]AKA{I|L} 9 0 + 60.288 0.0 0.0 6.6648 6.6648 93.543 0.0 0.0 0.0 39.03202106575929 9.843050114734808 9.843050114734808 60.28836270845879 0 0.4247425010840047 2.0 0.0 0.0 + + VPP[{I|L}P]AKA{I|L} 6.6648 + + 270 + 1 1.465 69637.4 1.0 6755 4714 11465 HBL1_DMSO_200M_050219_2,11471 HBL1_DMSO_200M_050219_2,11471,VPPPLAKAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11472 61.914 39.0 915280.0 25 0 73044.0 + 15749 SLADLQNDEV 10 71 552.7680460743543 1103.5215392155085 2 552.2648193240166 MULTI CID FTMS 0 0 0 11465 703813.8125 0.3425633204043122 -2 0.1881103515625 7 Unmodified _ISADTHQFSV_ ENSG00000145425|ENST00000274065|RPS3A;ENST00000389400.4_1_10:86320393-86320726:+|nuORF 14.838274106304384 0.5985701837916485 4 {NN|[MP]|[D{I|L}]|[EV]}AS{I|L}Q 6 7 39.614 0.0 0.0 3.5898 0.0 0.0 0.0 473.17477342865226 473.17477342865226 16.057743964882718 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}AS{I|L}Q 3.5898 - 304 1 1.465 33541.5 1.0 6756 4714 11465 HBL1_DMSO_200M_050219_2,11472 HBL1_DMSO_200M_050219_2,11472,ISADTHQFSV False False SLADLQNDEV 61.913923 552.264819324017 19620068.0 11465.0 ENSG00000145425|ENST00000274065|RPS3A;;ENST00000389400.4_1_10:86320393-86320726:+|nuORF 3.4006622632344565 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11473 61.916 111.0 934400.0 25 0 212710.0 -1 0 99 304.1945262630192 606.3744995928384 2 304.1943237185478 MULTI CID FTMS 0 0 0 11465 690478.875 0.262323777281629 2 -0.1589279174804687 8 4 YA{I|L}{I|L}K 5 -1 + 63.716 0.0 0.0 10.508 10.508 86.067 0.0 0.0 0.0 36.020599913279625 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.3494850021680094 2.0 0.0 0.3054621874040891 YA{I|L}{I|L}K;YA{I|L}K{I|L};Y{I|L}A{I|L}K;Y{I|L}AK{I|L};[K{I|L}]{I|L}AY;[{I|L}A]K{I|L}Y;[K{I|L}]A{I|L}Y 10.508;10.011;5.1438;4.6474;3.1185;3.1126;2.6975 -;-;-;-;-;-;- 56 + 1 1.465 87779.6 1.0 6757 4714 11465 HBL1_DMSO_200M_050219_2,11473 HBL1_DMSO_200M_050219_2,11473, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11474 61.918 79.0 974460.0 25 0 91828.0 + 13824 HTPQNLITV 9 103 511.7848442284416 1021.5551355236832 2 511.7853881716728 MULTI CID FTMS 0 0 0 11465 586371.6875 0.83939204482318 -1 0.1192550659179687 9 Unmodified _HTPQNLITV_ ENSG00000213928|ENST00000396864|IRF9;ENST00000557894.5_1_14:24634074-24635402:+|nuORF;ENST00000560311.1_1_14:24634973-24635402:+|nuORF;ENST00000561415.1_1_14:24633725-24635402:+|nuORF 39.94969957227396 0.0757326808254658 4 {I|L}{I|L}N[MN]TV 7 6 35.208 0.0 0.0 3.4465 0.0 0.0 218.12771960747065 0.0 218.12771960747065 0.0 17.857441730892276 0.0 0.0 0 0.0 0.0 1.524227503252014 0.0 {I|L}{I|L}N[MN]TV 3.4465 - 418 + 1 1.465 61166.2 1.0 6758 4714 11465 HBL1_DMSO_200M_050219_2,11474 HBL1_DMSO_200M_050219_2,11474,HTPQNLITV True True HTPQNLITV 61.918069 511.785388171673 14159558.0 11465.0 ENST00000560311.1_1_14:24634973-24635402:+|nuORF;;ENST00000561415.1_1_14:24633725-24635402:+|nuORF;;ENST00000557894.5_1_14:24634074-24635402:+|nuORF;;ENSG00000213928|ENST00000396864|IRF9 4.240588426589966 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11475 61.919 55.0 883920.0 25 0 104890.0 + 43893 FYNGPVSKF 9 85 529.7690744239025 1057.5235959146048 2 529.7693969607353 MULTI CID FTMS 0 0 0 11465 516486.625 0.4994565609917588 -2 0.1881103515625 10 Unmodified _YFSQWKSL_ ENSG00000170522|ENST00000302274|ELOVL6 26.34127834903884 0.4900704351052977 4 [VP]PS[RP]NYE 9 8 + 43.433 0.0 0.0 4.1071 4.1071 78.009 0.0 0.0 0.0 2.587196999455124 30.66883813034956 2.587196999455124 9.208187539523747 0 0.4247425010840047 0.958607314841775 0.0 0.4247425010840047 [VP]PS[RP]NYE;[VP]PS[RP]GGYE;{M(Oxidation (M))|F}YNG{I|L}{I|L}[KG]{M(Oxidation (M))|F};[KS][WK]{[MS]|[{M(Oxidation (M))|F}A]}YE;{M(Oxidation (M))|F}Y[YR][EP]A{I|L};[VP]P[HV]{[MS]|[{M(Oxidation (M))|F}A]}YE;[VS]{[QN]|[E{I|L}]|[KN]}[YR]YE 4.1071;3.2363;2.9443;2.0936;2.047;1.6477;1.6424 -;-;-;-;-;-;- 156 1 1.465 43160.2 1.0 6759 4714 11465 HBL1_DMSO_200M_050219_2,11475 HBL1_DMSO_200M_050219_2,11475,YFSQWKSL False False FYNGPVSKF 61.919477 529.769396960735 7901216.5 11465.0 ENSG00000170522|ENST00000302274|ELOVL6 6.899118264516194 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11476 61.921 75.0 947390.0 25 0 85943.0 + 30976 RLAVYIDKV 9 90 538.8271253083633 1075.6396976835265 2 538.8273193240166 MULTI CID FTMS 0 0 0 11465 479445.375 0.82599942027013 -1 0.1192550659179687 11 Unmodified _RLAVYIDKV_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 29.081581746732265 0.1611639662936252 4 DKV 3 6 28.971 0.0 0.0 2.6933 0.0 0.0 715.4388747848922 0.0 715.4388747848922 0.0 12.772657074340898 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.25 + DKV 2.6933 + + 123 + 1 1.465 61281.9 1.0 6760 4714 11465 HBL1_DMSO_200M_050219_2,11476 HBL1_DMSO_200M_050219_2,11476,RLAVYIDKV False True RLAVYIDKV 61.921231 538.827319324017 7713934.0 11465.0 chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;;ENSG00000113368|ENST00000261366|LMNB1 4.919576327006022 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11477 61.923 91.0 529540.0 25 0 31259.0 + 22159 LPPSALQSV 9 83 456.26346091798274 910.5123689027656 2 456.2634765505791 MULTI CID FTMS 0 0 0 11465 388858.75 0.2764309855562995 13 -1.1960182189941406 12 Unmodified _LPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 23.1484247019978 0.2366544122328345 4 SV 2 7 16.479 0.0 0.0 1.8099 0.0 0.0 706.4007031086234 0.0 706.4007031086234 0.0 -2.940272245059216 -2.940272245059216 0.0 0 0.0 0.0 0.25 0.0 + SV 1.8099 + + 69 + 1 1.465 45714.9 1.0 6761 4714 11465 HBL1_DMSO_200M_050219_2,11477 HBL1_DMSO_200M_050219_2,11477,LPPSALQSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11478 61.925 82.0 602520.0 25 0 46552.0 + 34248 SLQDEIQRV 9 86 544.2897046724331 1086.564856411666 2 544.2901489138603 MULTI CID FTMS 0 0 0 11465 395587.6875 0.5223448945296089 1 -0.07952880859375 13 Unmodified _SLQDEIQRV_ ENSG00000065183|ENST00000349139|WDR3 32.78568957990786 0.1150597335874693 4 {[TV]|[{I|L}S]}QDE{I|L}QRV 9 0 + 70.729 0.0 0.0 6.5094 6.5094 87.636 0.0 0.0 0.0 40.22243040440678 9.27067703229376 9.27067703229376 9.208187539523747 0 0.4247425010840047 2.0 0.5 0.3494850021680094 + + {[TV]|[{I|L}S]}QDE{I|L}QRV;{[TV]|[{I|L}S]}QDE{I|L}[AG]RV;{[TV]|[{I|L}S]}[AG]DE{I|L}QRV;{[TV]|[{I|L}S]}QDE{I|L}[RN]{I|L};{[TV]|[{I|L}S]}[AG]DE{I|L}[AG]RV;{[TV]|[{I|L}S]}QDE{I|L}{[NV]|[RG]}G{I|L};{[TV]|[{I|L}S]}QDE{I|L}{[NV]|[RG]}AV;{[TV]|[{I|L}S]}[AG]DE{I|L}[RN]{I|L};{[TV]|[{I|L}S]}[AG]DE{I|L}{[NV]|[RG]}G{I|L};{[TV]|[{I|L}S]}[AG]DE{I|L}{[NV]|[RG]}AV 6.5094;5.662;5.662;5.1816;4.8185;4.6504;4.5295;4.3341;3.8069;3.6861 +;-;-;-;-;-;-;-;-;- + 396 + 1 1.465 43877.5 1.0 6762 4714 11465 HBL1_DMSO_200M_050219_2,11478 HBL1_DMSO_200M_050219_2,11478,SLQDEIQRV True True SLQDEIQRV 61.925089 544.29014891386 4685745.5 11465.0 ENSG00000065183|ENST00000349139|WDR3 6.019964694976807 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11479 61.93 280.0 726530.0 25 0 136290.0 -1 0 160 340.2598216139572 678.5050902947144 2 340.2594787478447 MULTI CID FTMS 0 0 0 11465 357813.96875 0.6824764722417395 -2 0.1881103515625 14 4 {I|L}{I|L} 2 -1 29.464 0.0 0.0 4.3425 0.0 0.0 0.0 449.3147976154651 449.3147976154651 14.959697262651463 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L}{I|L} 4.3425 - 34 + 1 1.465 163294.4 1.0 6763 4714 11465 HBL1_DMSO_200M_050219_2,11479 HBL1_DMSO_200M_050219_2,11479, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11480 61.933 146.0 538430.0 25 0 74883.0 20507 LLLLHCSA 8 106 435.25113249996593 868.4877120667319 2 435.2513000369072 MULTI CID FTMS 0 0 0 11465 356444.9375 0.5726511800705884 7 -0.5794296264648438 15 Unmodified _LLLLHCSA_ ENST00000276390.6_1_8:20077913-20077943:+|nuORF 2.577480529830294 0.808687252328423 4 V 1 8 9.8329 0.0 0.0 1.1322 0.0 0.0 751.4081889117499 0.0 751.4081889117499 0.0 0.5005757644163378 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1322 - 14 + 1 1.465 66940.6 1.0 6764 4714 11465 HBL1_DMSO_200M_050219_2,11480 HBL1_DMSO_200M_050219_2,11480,LLLLHCSA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11481 61.938 253.0 486770.0 25 0 48832.0 -1 YMIDPSGVSY 10 128 574.2522709111895 1146.489988889179 2 574.2527953982353 MULTI CID FTMS 0 0 0 11465 347116.78125 0.0677158734154793 -4 0.392822265625 16 Oxidation (M) _YM(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 32.30548876998284 0.2428506522065767 4 [Y{M(Oxidation (M))|F}]D[KP]EV{[{M(Oxidation (M))|F}C]|[YS]} 9 -1 + 35.123 0.0 0.0 3.0636 3.0636 62.364 0.0 0.0 0.0 0.5420733539311939 5.6424927368726046 0.5420733539311939 0.5420733539311939 0 0.5 0.0 0.6989700043360187 0.0 [Y{M(Oxidation (M))|F}]D[KP]EV{[{M(Oxidation (M))|F}C]|[YS]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DK{M(Oxidation (M))|F}EV{[{M(Oxidation (M))|F}C]|[YS]};[PS]GVY{M(Oxidation (M))|F}EV{[{M(Oxidation (M))|F}C]|[YS]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{M(Oxidation (M))|F}QEV{[{M(Oxidation (M))|F}C]|[YS]};[VG]SPY{M(Oxidation (M))|F}EV{[{M(Oxidation (M))|F}C]|[YS]};[{M(Oxidation (M))|F}V]EK{M(Oxidation (M))|F}EV{[{M(Oxidation (M))|F}C]|[YS]};{[QD]|[EN]|[WG]|[KD]|[RS]}PY{M(Oxidation (M))|F}EV{[{M(Oxidation (M))|F}C]|[YS]};[Y{M(Oxidation (M))|F}]D[KP]D{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DK{M(Oxidation (M))|F}D{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}QEV{[{M(Oxidation (M))|F}C]|[YS]} 3.0636;3.0163;2.942;2.7936;2.7014;2.3872;2.3728;2.2336;2.1863;2.1645 -;-;-;-;-;-;-;-;-;- 1001 1 1.465 99719.0 1.0 6765 4714 11465 HBL1_DMSO_200M_050219_2,11481 HBL1_DMSO_200M_050219_2,11481,YMIDPSGVSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11482 61.95 688.0 514930.0 25 0 21964.0 + 5905 DPYKVYRIV 9 181 576.8241678675307 1151.6337828018611 2 576.8251830935478 MULTI CID FTMS 0 0 0 11465 254491.890625 0.0275655268752412 5 -0.4181175231933594 17 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 38.61474834105838 0.0830609365873449 4 DPYKV 5 4 61.004 0.0 0.0 5.2972 0.0 0.0 0.0 546.3054140569196 546.3054140569196 30.78563115583019 0.0 0.0 0.0 0 1.1496498648046138 1.154901959985743 0.0 0.0 + DPYKV 5.2972 + + 3939 + 1 1.465 263380.1 1.0 6766 4714 11465 HBL1_DMSO_200M_050219_2,11482 HBL1_DMSO_200M_050219_2,11482,DPYKVYRIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11483 61.954 242.0 663150.0 25 0 54515.0 + 15971 ITDDQREM 8 157 504.2269986237976 1006.4394443143952 2 504.2278625369072 MULTI CID FTMS 0 0 0 11465 257690.390625 0.8622740712515236 -1 0.1192550659179687 18 Unmodified _ITDDQREM_ REV__ENST00000472851.1_1_1:10577137-10596572:+|nuORF 26.88365393820708 0.4786498634179528 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}MYDTM 8 -1 + 48.017 0.0 0.0 4.771 4.771 70.464 0.0 0.0 0.0 23.20977063365467 23.59553516110668 23.20977063365467 1.893878342760047 0 1.5044321917401078 2.0 0.6139829889124311 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}MYDTM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))H]QVVM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}MYSEM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))H]Q{I|L}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KC]P{[HG]|PP}TM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q]HVVM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))H][KP]TM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q]H{I|L}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KC][YK]TM;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))H][AG]{I|L}{[ES]|[DT]|[{I|L}C]} 4.771;4.5828;4.1443;4.0982;4.0794;4.0422;3.8052;3.5576;3.207;2.7996 -;-;-;-;-;-;-;-;-;- 947 1 1.465 123465.7 1.0 6767 4714 11465 HBL1_DMSO_200M_050219_2,11483 HBL1_DMSO_200M_050219_2,11483,ITDDQREM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11484 61.967 749.0 353230.0 25 0 17913.0 + 33864 SLFEKGLKNV 10 211 567.8289243932493 1133.6432958532985 2 567.8295165896416 MULTI CID FTMS 0 0 0 11465 217051.734375 1.0 0 0.0 19 Unmodified _SLFEKGLKNV_ ENSG00000118564|ENST00000341285|FBXL5;nc|ENSG00000118564|Q9UKA1-2|FBXL5 69.33821966488729 0.0189579340102328 4 VT{M(Oxidation (M))|F}V{I|L}{[QS]|[NT]}KNV 10 6 + 54.115 0.0 0.0 4.7735 4.7735 77.097 0.0 0.0 0.0 30.97775146035432 2.140785525501414 2.140785525501414 6.364554064455135 0 1.610924374808178 1.6989700043360187 0.785666875892183 0.6307196863200843 VT{M(Oxidation (M))|F}V{I|L}{[QS]|[NT]}KNV;VT{M(Oxidation (M))|F}V{I|L}{[QS]|[NT]}KVN;VT{M(Oxidation (M))|F}V{I|L}{[QS]|[NT]}KGGV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VQS{I|L}KNV;[Y{I|L}]AVQS{I|L}KNV;V{I|L}{I|L}{M(Oxidation (M))|F}SQSKNV;VT{M(Oxidation (M))|F}V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}VMV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SKNV;VT{M(Oxidation (M))|F}V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VQS{I|L}KGGV 4.7735;4.2121;3.8825;3.3529;2.8804;2.8179;2.7785;2.7138;2.7015;2.5445 -;-;-;-;-;-;-;-;-;- 3414 + 1 1.465 194198.2 1.0 6768 4714 11465 HBL1_DMSO_200M_050219_2,11484 HBL1_DMSO_200M_050219_2,11484,SLFEKGLKNV True True SLFEKGLKNV 61.967362 567.829516589642 1628017.625 11465.0 nc|ENSG00000118564|Q9UKA1-2|FBXL5;;ENSG00000118564|ENST00000341285|FBXL5 4.464789311091105 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11485 61.981 765.0 716490.0 25 0 97820.0 + -1 YYLCKMREE 9 152 646.2941509627079 1290.5737489922158 2 646.2941772341728 MULTI CID FTMS 0 0 0 11465 213933.953125 0.0965272198865049 -3 0.2910614013671875 20 Carbamidomethyl (C) _YYLC(Carbamidomethyl (C))KMREE_ REV__ENSG00000121892|ENST00000303538|PDS5A;REV__nc|ENSG00000121892|Q29RF7-3|PDS5A 48.345845343767074 0.0439967357579942 4 YYS[EC]M{I|L}RQV 10 -1 + 88.714 0.0 0.0 6.874 6.874 85.32 0.0 0.0 0.0 24.87965367563433 6.537209583838219 6.537209583838219 6.122632219204675 0 1.305462187404089 2.0 0.3807196863200844 1.6549471895720984 YYS[EC]M{I|L}RQV;YYS[EC]M{I|L}RGAV;YYS[EC]M{I|L}RN{I|L};YY{I|L}D[WM][KC]AV;YY{I|L}DS{[ET]|[MV]}[KC]AV;YYS[EC]M{I|L}RGG{I|L};YY{I|L}D[WM][C(Carbamidomethyl (C))K]{I|L};YY{I|L}DS{[ET]|[MV]}[C(Carbamidomethyl (C))K]{I|L};YY[MT][DC]{I|L}RQV;YY{I|L}D[WM][KC]G{I|L} 6.874;6.3996;6.3675;6.2508;6.2188;5.8931;5.893;5.8575;5.8358;5.7443 -;-;-;-;-;-;-;-;-;- 6027 + 1 1.465 395226.5 1.0 6769 4714 11465 HBL1_DMSO_200M_050219_2,11485 HBL1_DMSO_200M_050219_2,11485,YYLCKMREE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11487 61.985 83.0 377950.0 25 0 18700.0 + + 30087 KMIEDLQNEL 10 73 624.8104561954568 1247.6063594577136 2 624.8105346560478 MULTI CID FTMS 0 0 0 11486 581139.25 0.8272218163416875 1 -0.0793991088867187 1 Unmodified _QVEEFTKPSPS_ ENSG00000198887|ENST00000361138|SMC5 24.99096001346401 0.505407273373304 4 {[QV]|[N{I|L}]|[RA]|[KV]}EE{M(Oxidation (M))|F}{I|L}QN{I|L}E 10 -1 + 53.909 0.0 0.0 4.321 4.321 68.632 0.0 0.0 0.0 1.7778070526608118 8.008181446299858 1.7778070526608118 1.7778070526608118 0 0.0738194166937224 1.154901959985743 1.079689690656103 0.2742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}EE{M(Oxidation (M))|F}{I|L}QN{I|L}E;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{M(Oxidation (M))|F}{I|L}QN{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}EE{M(Oxidation (M))|F}{I|L}NQ{I|L}E;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{M(Oxidation (M))|F}{I|L}NQ{I|L}E;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}ED{I|L}QN{I|L}E;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}ED{I|L}NQ{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}EE{M(Oxidation (M))|F}{I|L}QGG{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}EE{M(Oxidation (M))|F}{I|L}[AG]N{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NQ{I|L}DE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{M(Oxidation (M))|F}{I|L}QGG{I|L}E 4.321;4.1785;4.0797;3.9372;3.8376;3.5963;3.5864;3.5864;3.5372;3.4439 -;-;-;-;-;-;-;-;-;- 665 1 1.465 31771.3 1.0 6770 4715 11486 HBL1_DMSO_200M_050219_2,11487 HBL1_DMSO_200M_050219_2,11487,QVEEFTKPSPS False False KMIEDLQNEL 61.984927 624.810534656048 14176913.0 11486.0 ENSG00000198887|ENST00000361138|SMC5 6.4204386075337725 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11488 61.989 190.0 296210.0 25 0 21532.0 29196 QGHLKFTV 8 104 465.2647565667504 928.5149602003008 2 466.2647888064384 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _QGHLKFTV_ ENSG00000092200|ENST00000400017|RPGRIP1;nc|ENSG00000092200|Q96KN7-2|RPGRIP1;nc|ENSG00000092200|Q96KN7-3|RPGRIP1;nc|ENSG00000092200|Q96KN7-4|RPGRIP1;nc|ENSG00000092200|Q96KN7-5|RPGRIP1 14.581692164780916 0.6954967302934248 4 {[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}[VS]{I|L}PT 9 7 + 28.075 0.0 0.0 3.0237 3.0237 78.606 0.0 0.0 0.0 9.263166559787756 3.412256230146397 3.412256230146397 20.37644096193061 0 0.3650219788552205 1.6989700043360187 0.1803115997617927 0.0 {[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}[VS]{I|L}PT;{[TV]|[{I|L}S]}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PT;{[SA]|[TG]}[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}PT 3.0237;0.82917;0.74148 -;-;- 188 1 1.465 47173.9 1.0 6771 4715 11486 HBL1_DMSO_200M_050219_2,11488 HBL1_DMSO_200M_050219_2,11488,QGHLKFTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11489 61.99 29.0 2946700.0 25 0 337780.0 + 3409 AYVHMVTHF 9 90 368.8482067050294 1103.5227907152882 3 368.8478576540947 MULTI CID FTMS 0 0 0 11486 1734148.5 0.0629793410586218 -3 0.26763916015625 3 Unmodified _AYVHMVTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 32.30548876998284 0.1201446275138228 4 AYVHMV[HT]{M(Oxidation (M))|F} 9 0 + 69.333 0.0 0.0 6.2829 6.2829 90.765 0.0 0.0 0.0 41.196662315049934 5.686362358410122 5.686362358410122 23.521825181113627 0 0.25 2.0 0.0 0.0 + + AYVHMV[HT]{M(Oxidation (M))|F};AYVH{[{M(Oxidation (M))|F}H]|[RQ]}[PS]{M(Oxidation (M))|F};AYV{M(Oxidation (M))|F}HH[PS]{M(Oxidation (M))|F};AYVH{[{M(Oxidation (M))|F}H]|[RQ]}{[HG]|PP}H;AYV{M(Oxidation (M))|F}HH{[HG]|PP}H 6.2829;4.1513;4.0357;3.8785;3.4462 +;-;-;-;- + 296 + 1 1.465 73773.3 1.0 6772 4715 11486 HBL1_DMSO_200M_050219_2,11489 HBL1_DMSO_200M_050219_2,11489,AYVHMVTHF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11490 61.991 42.0 1105600.0 25 0 76843.0 + 16442 KAIDIYEQV 9 83 539.7928343895956 1077.571115845991 2 539.7929565310478 MULTI CID FTMS 0 0 0 11486 979167.25 0.5445917104523934 -2 0.1987838745117187 4 Unmodified _KAIDIYEQV_ ENSG00000105402|ENST00000263354|NAPA;ENST00000597778.5_1_19:47995938-47996286:-|nuORF 32.78568957990786 0.1150597335874693 4 {NN|[MP]|[D{I|L}]|[EV]}AK{I|L}YEQV 9 4 + 43.364 0.0 0.0 4.0242 4.0242 73.626 0.0 0.0 0.0 3.4678748622465605 30.889399919613965 3.4678748622465605 5.826314394896372 0 0.4177353201839438 0.0 0.7302046884880937 0.0 {NN|[MP]|[D{I|L}]|[EV]}AK{I|L}YEQV;[AG]V{[TV]|[{I|L}S]}{I|L}YEQV;{[QN]|[E{I|L}]|[KN]}GK{I|L}YEQV;{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}YQ{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}AKY{I|L}EQV;{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}{I|L}YEQV;[AG]V{[TV]|[{I|L}S]}{I|L}YQ{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}GK{I|L}YQ{NN|[MP]|[D{I|L}]|[EV]};{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}A]{I|L}YEQV;[AG]V{[TV]|[{I|L}S]}Y{I|L}EQV 4.0242;3.4835;3.4655;3.3572;3.2571;3.0487;2.8165;2.7985;2.7412;2.7164 -;-;-;-;-;-;-;-;-;- 192 1 1.465 45107.8 1.0 6773 4715 11486 HBL1_DMSO_200M_050219_2,11490 HBL1_DMSO_200M_050219_2,11490,KAIDIYEQV True True KAIDIYEQV 61.990956 539.792956531048 29332090.0 11486.0 ENST00000597778.5_1_19:47995938-47996286:-|nuORF;;ENSG00000105402|ENST00000263354|NAPA 5.598366578420003 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11491 61.992 48.0 1334800.0 25 0 281300.0 + 45785 YYLFENTVEN 10 66 431.1984593672242 1290.5735487018726 3 431.1987487673759 MULTI CID FTMS 0 0 0 11486 984554.875 0.3825713677320105 -2 0.1987838745117187 5 Unmodified _YYLFENTVEN_ REV__ENSG00000157423|ENST00000393567|HYDIN;REV__ENST00000378856.8_2_16:70845233-70899022:-|nuORF;REV__nc|ENSG00000157423|Q4G0P3-2|HYDIN 9.38312468134398 0.6832340498775793 4 YY{I|L}D 4 -1 40.445 0.0 0.0 3.1339 0.0 0.0 0.0 733.3148508232322 733.3148508232322 21.77317490243957 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YY{I|L}D 3.1339 - 65 + 1 1.465 61360.3 1.0 6774 4715 11486 HBL1_DMSO_200M_050219_2,11491 HBL1_DMSO_200M_050219_2,11491,YYLFENTVEN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11492 61.994 55.0 1176600.0 25 0 111540.0 + 25207 MTTEYYIC 8 92 512.2102355335533 1022.4059181339064 2 512.2104980349541 MULTI CID FTMS 0 0 0 11486 922978.5 1.0 0 0.0 6 Unmodified _MTTEYYIC_ REV__ENSG00000147255|ENST00000361420|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1;REV__nc|ENSG00000147255|Q8N6C5-4|IGSF1 9.347437153973935 0.7675937258251505 4 MT 2 -1 24.776 0.0 0.0 2.4233 0.0 0.0 0.0 787.295440800425 787.295440800425 3.696822316851698 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 MT 2.4233 + + 167 + 1 1.465 55836.7 1.0 6775 4715 11486 HBL1_DMSO_200M_050219_2,11492 HBL1_DMSO_200M_050219_2,11492,MTTEYYIC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11493 61.996 100.0 826360.0 25 0 75339.0 18605 LAEATLGALL 10 116 486.2924062901583 970.5702596471166 2 486.2930480837822 MULTI CID FTMS 0 0 0 11486 529990.0 0.9149961198253188 -1 0.07952880859375 7 Unmodified _LAEATLGALL_ ENSG00000175029|ENST00000309035|CTBP2 28.486842064014134 0.328649637529545 4 [VS]{I|L}EG[Q{I|L}]{I|L}{I|L} 9 7 + 39.925 0.0 0.0 4.1136 4.1136 70.406 0.0 0.0 0.0 11.358244350536356 4.699959567782031 4.699959567782031 3.01029995663982 0 1.524227503252014 2.0 0.0 0.0 [VS]{I|L}EG[Q{I|L}]{I|L}{I|L};[VS]{I|L}EG{[VA]|[{I|L}G]}A{I|L}{I|L};[VS]{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}{I|L};[VS]{I|L}E[{I|L}P]KSV;[VS][QP][{I|L}T]T{I|L}{I|L};[{I|L}A]G{I|L}A{[CP]|[EA]}T{I|L}{I|L};{[VA]|[{I|L}G]}A{I|L}A{[CP]|[EA]}T{I|L}{I|L};[{I|L}P]KS{[CP]|[EA]}T{I|L}{I|L};W[W{I|L}][Q{I|L}]{I|L}{I|L};[{I|L}A]G{I|L}WW{I|L}{I|L} 4.1136;3.8034;3.6088;3.1396;2.8097;2.7963;2.4083;2.1278;2.1214;2.0761 -;-;-;-;-;-;-;-;-;- 517 + 1 1.465 67544.2 1.0 6776 4715 11486 HBL1_DMSO_200M_050219_2,11493 HBL1_DMSO_200M_050219_2,11493,LAEATLGALL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11494 61.999 168.0 767700.0 25 0 63366.0 + 40481 VIPVNVPEA 9 112 469.271612248038 936.528671562876 2 469.2715026736259 MULTI CID FTMS 0 0 0 11486 456601.65625 0.3856389751128207 -2 0.1987838745117187 8 Unmodified _VIPVNVPEA_ ENSG00000136628|ENST00000366923|EPRS1 50.855029805455786 0.0384952370514206 4 {I|L}P{[CT]|[{M(Oxidation (M))|F}G]}{I|L}VN 7 7 40.939 0.0 0.0 4.3713 0.0 0.0 0.0 193.0988710992797 193.0988710992797 18.26281636079463 0.0 0.0 0.0 0 0.2887254899964357 0.8538719643217619 0.0 0.3807196863200844 {I|L}P{[CT]|[{M(Oxidation (M))|F}G]}{I|L}VN 4.3713 - 315 + 1 1.465 104196.3 1.0 6777 4715 11486 HBL1_DMSO_200M_050219_2,11494 HBL1_DMSO_200M_050219_2,11494,VIPVNVPEA True True VIPVNVPEA 61.999076 469.271502673626 9205054.0 11486.0 ENSG00000136628|ENST00000366923|EPRS1 3.324982444445292 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11495 62.002 143.0 677920.0 25 0 55249.0 + + 27880 PLPLVKSL 8 105 433.7891068568911 865.5636607805822 2 433.7893554568291 MULTI CID FTMS 0 0 0 11486 446641.75 0.7990454750072287 -1 0.07952880859375 9 Unmodified _PLSIKPLV_ ENSG00000135372|ENST00000257829|NAT10;nc|ENSG00000135372|Q9H0A0-2|NAT10 26.88365393820708 0.4786498634179528 4 {I|L}PP{I|L}VTKV 8 -1 + 58.643 0.0 0.0 6.7751 6.7751 76.381 0.0 0.0 0.0 13.020220652167596 3.2009760973670325 3.2009760973670325 0.7705956105040883 0 0.6069758080123702 2.0 0.0 0.0 {I|L}PP{I|L}VTKV;{I|L}PP{I|L}VKTV;{I|L}PP{I|L}VKS{I|L} 6.7751;6.6861;6.4053 -;-;- 150 + 1 1.465 79602.2 1.0 6778 4715 11486 HBL1_DMSO_200M_050219_2,11495 HBL1_DMSO_200M_050219_2,11495,PLSIKPLV False False PLPLVKSL 62.001945 433.789355456829 7729378.5 11486.0 ENSG00000135372|ENST00000257829|NAT10;;nc|ENSG00000135372|Q9H0A0-2|NAT10 1.0557448863983154 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11496 62.005 138.0 518090.0 25 0 72558.0 + 35849 SVLEDPVHAV 10 92 533.2834239391916 1064.5522949451831 2 533.2834350466728 MULTI CID FTMS 0 0 0 11486 359215.71875 0.382389909531672 -2 0.1987838745117187 10 Unmodified _SVLEDPVHAV_ ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1 43.85829265575387 0.1168243637355526 4 [VS]{I|L}ED[VP][HA]V 10 0 + 57.72 0.0 0.0 5.422 5.422 85.427 0.0 0.0 0.0 24.74468968362665 0.4575749056067479 0.4575749056067479 12.525749891599531 0 1.1237125054200234 2.0 0.3807196863200844 0.0 + + [VS]{I|L}ED[VP][HA]V;[VS]{I|L}E[HA][DV]PV;[H{I|L}]G[{I|L}T]DE{I|L}[PA];[VS]{I|L}E[HA]E{I|L}[PA];{[QN]|[E{I|L}]|[KN]}[VS][HA]E{I|L}[PA];[VS]{I|L}[{M(Oxidation (M))|F}V][WD]TV;[VS]{I|L}E[HA]E[PA]{I|L};{[QN]|[E{I|L}]|[KN]}[YN][{M(Oxidation (M))|F}V]{I|L}[PA];{[QN]|[E{I|L}]|[KN]}D[VP][DP]{I|L}[PA];[VS]{I|L}[{M(Oxidation (M))|F}V][WD]S{I|L} 5.422;4.2454;4.0345;3.8919;3.4234;3.349;3.2445;3.0926;3.0496;2.9592 +;-;-;-;-;-;-;-;-;- + 530 + 1 1.465 64409.7 1.0 6779 4715 11486 HBL1_DMSO_200M_050219_2,11496 HBL1_DMSO_200M_050219_2,11496,SVLEDPVHAV True True SVLEDPVHAV 62.004745 533.283435046673 18207624.0 11486.0 nc|ENSG00000058262|P61619-3|SEC61A1;;ENSG00000058262|ENST00000243253|SEC61A1 7.675017356872559 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11497 62.019 800.0 224290.0 25 0 12627.0 + -1 VFGMCMYDY 9 164 593.2259572345041 1184.437361535808 2 593.2265502810478 MULTI CID FTMS 0 0 0 11486 172545.140625 0.5496527093726011 -3 0.26763916015625 11 Carbamidomethyl (C) _VFGMC(Carbamidomethyl (C))MYDY_ REV__ENSG00000125505|ENST00000245615|MBOAT7;REV__ENST00000494142.1_1_19:54677740-54682918:-|nuORF;REV__nc|ENSG00000125505|Q96N66-2|MBOAT7 8.593279151180031 0.6146971463335029 4 Y{M(Oxidation (M))|F} 2 -1 22.717 0.0 0.0 1.9179 0.0 0.0 0.0 871.3189560266843 871.3189560266843 8.791390076215153 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 1.9179 - 251 + 1 1.465 131853.8 0.9900000095367432 6780 4715 11486 HBL1_DMSO_200M_050219_2,11497 HBL1_DMSO_200M_050219_2,11497,VFGMCMYDY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11498 62.032 800.0 214980.0 25 0 18823.0 + -1 WWCLCMLM 8 187 411.16297595614736 0 411.2089721560478 PEAK CID FTMS 0 0 0 11486 31961.47265625 0.192120067443299 15 -1.351665496826172 12 2 Carbamidomethyl (C),2 Oxidation (M) _WWC(Carbamidomethyl (C))LC(Carbamidomethyl (C))M(Oxidation (M))LM(Oxidation (M))_ REV__ENST00000235329.9_1_1:12058828-12058927:+|nuORF 1.844237919475145 0.5938792933265344 4 P 1 -1 5.4846 0.0 0.0 0.66859 0.0 0.0 201.0461107747496 519.1821993463499 720.2283101210994 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.66859 - 31 + 1 1.465 134972.0 0.6800000071525574 6781 4715 11486 HBL1_DMSO_200M_050219_2,11498 HBL1_DMSO_200M_050219_2,11498,WWCLCMLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11499 62.046 800.0 304340.0 25 0 15149.0 + 43372 WPYGNRQEI 9 179 581.7863487852982 1161.5581446373965 2 581.7887451052666 MULTI CID FTMS 0 0 0 11486 143801.53125 0.8125134855390879 1 -0.0793991088867187 13 Unmodified _WPYGNRQEI_ ENSG00000119392|ENST00000309971|GLE1;nc|ENSG00000119392|Q53GS7-2|GLE1 71.92227651296345 0.0203558744033348 4 WPY[HV]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}S{I|L} 9 5 + 48.227 0.0 0.0 4.152 4.152 67.783 0.0 0.0 0.0 -2.182854920621402 1.0114238076771898 -2.182854920621402 1.7609125905568137 0 0.6549471895720985 1.2218487496163564 0.5796896906561032 0.6549471895720984 WPY[HV]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}S{I|L};WPY[RH]{[CT]|[{M(Oxidation (M))|F}G]}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[TP]ESYEP{I|L};{[TV]|[{I|L}S]}[QP]ESYEP{I|L};WPY[HV]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W;[VP][QT]ESYEP{I|L};WPYG[{I|L}V]EGE{I|L};WPY[HV]G{[CT]|[{M(Oxidation (M))|F}G]}S{I|L};WPY[HV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CT]|[{M(Oxidation (M))|F}G]};[TP]ARESYEP{I|L} 4.152;4.0004;3.817;3.5641;3.5537;3.5184;3.4992;3.4805;3.3837;3.2859 -;-;-;-;-;-;-;-;-;- 2157 + 1 1.465 178325.7 0.9200000166893004 6782 4715 11486 HBL1_DMSO_200M_050219_2,11499 HBL1_DMSO_200M_050219_2,11499,WPYGNRQEI True True WPYGNRQEI 62.046222 581.788745105267 3333882.0 11486.0 ENSG00000119392|ENST00000309971|GLE1;;nc|ENSG00000119392|Q53GS7-2|GLE1 -0.156194120645523 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11500 62.06 800.0 352990.0 25 0 19858.0 + -1 LHEFCNNSL 9 197 567.2563841821325 1132.4982154310649 2 567.2562133669853 MULTI CID FTMS 0 0 0 11486 130063.453125 1.0 0 0.0 14 Carbamidomethyl (C) _LHEFC(Carbamidomethyl (C))NNSL_ REV__ENSG00000160796|ENST00000450053|NBEAL2;REV__nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;REV__nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 30.63653989081413 0.1413794767160703 4 {I|L}DC(Carbamidomethyl (C))M{I|L}G[C(Carbamidomethyl (C))K]H 9 -1 + 54.533 0.0 0.0 4.8153 4.8153 77.076 0.0 0.0 0.0 38.335457807513095 4.535891105973789 4.535891105973789 6.170494256301822 0 0.0 1.3979400086720375 0.0 1.079689690656103 {I|L}DC(Carbamidomethyl (C))M{I|L}G[C(Carbamidomethyl (C))K]H;{I|L}DC(Carbamidomethyl (C))P{[NV]|[RG]}{[CP]|[EA]}C{I|L};{I|L}DC(Carbamidomethyl (C))P[KS][YN]H;{I|L}DC(Carbamidomethyl (C))P[KS][DC]PV;{I|L}D[CG]M{I|L}G[C(Carbamidomethyl (C))K]H;D{I|L}C(Carbamidomethyl (C))M{I|L}G[C(Carbamidomethyl (C))K]H;{I|L}DC(Carbamidomethyl (C))P[KS][HN]Y;{I|L}DC(Carbamidomethyl (C))RR[DC]PV;{I|L}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}G[C(Carbamidomethyl (C))K]H;D{I|L}C(Carbamidomethyl (C))P{[NV]|[RG]}{[CP]|[EA]}C{I|L} 4.8153;4.2705;4.268;4.0588;4.0022;3.9086;3.8621;3.7479;3.3811;3.3638 -;-;-;-;-;-;-;-;-;- 2863 + 1 1.465 208860.2 0.9100000262260436 6783 4715 11486 HBL1_DMSO_200M_050219_2,11500 HBL1_DMSO_200M_050219_2,11500,LHEFCNNSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11502 62.064 2.3 26960000.0 25 0 2616000.0 + 3771 DAHIYLNHI 9 83 365.85799082968674 1094.5521430892602 3 365.8580505251884 MULTI CID FTMS 0 0 0 11501 23260592.0 1.0 0 0.0 1 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 49.55428908609986 0.0413471690215031 4 [HA]D{I|L}Y{I|L}N{I|L}H 9 4 [HA]D + + 54.567 20.15 6.2362 4.9853 4.9853 52.404 0.0 0.0 0.0 0.0 40.46398869151968 0.0 0.0 0 1.424742501084005 0.0 0.0 0.7302046884880937 [HA]D{I|L}Y{I|L}N{I|L}H 4.9853 - 148 + 1 1.461 54588.5 1.0 6784 4716 11501 HBL1_DMSO_200M_050219_2,11502 HBL1_DMSO_200M_050219_2,11502,DAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11503 62.066 3.0 18791000.0 25 0 3041600.0 + 3774 DAHIYLNHI 9 81 548.2829931927653 1094.5514334523305 2 548.2835571169853 MULTI CID FTMS 0 0 0 11501 18666988.0 1.0 0 0.0 2 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 87.25819977447905 0.0157581688916699 4 {[DA]|[EG]}H{I|L}Y{I|L}N{I|L}H 9 2 + 96.136 0.0 0.0 8.7832 8.7832 96.55 0.0 0.0 0.0 58.399028321079946 12.25268461881508 12.25268461881508 19.057422733489418 0 2.3807196863200843 1.3010299956639813 0.0 1.4916440611282626 {[DA]|[EG]}H{I|L}Y{I|L}N{I|L}H;[H{I|L}]DAY{I|L}NH{I|L};[HA]D{I|L}Y{I|L}NH{I|L};{[DA]|[EG]}H{I|L}Y{I|L}GG{I|L}H;[H{I|L}]DAY{I|L}GGH{I|L};[HA]D{I|L}Y{I|L}GGH{I|L};[H{I|L}]D[Y{I|L}]ANH{I|L};{[DA]|[EG]}[PG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}N{I|L}H;{[DA]|[EG]}[PG]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}H;{[DA]|[EG]}[VP]A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}H 8.7832;7.0421;6.9158;6.5791;6.2008;6.0745;4.9602;4.4184;4.2315;4.2106 -;-;-;-;-;-;-;-;-;- 375 + 1 1.461 48686.5 1.0 6785 4716 11501 HBL1_DMSO_200M_050219_2,11503 HBL1_DMSO_200M_050219_2,11503,DAHIYLNHI True True DAHIYLNHI 62.065503 548.283557116985 1106488720.0 11501.0 ENSG00000176890|ENST00000323274|TYMS;;nc|ENSG00000176890|P04818-3|TYMS;;chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;;nc|ENSG00000176890|P04818-2|TYMS;;ENST00000581920.1_1_18:667730-672994:+|nuORF 8.905013720194498 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11504 62.067 14.0 3537900.0 25 0 1083100.0 15683 IQQVRDFLT 9 67 560.3113174190072 1118.6080819048143 2 560.3116332888603 MULTI CID FTMS 0 0 0 11501 3643037.75 0.4423244302551875 -3 0.2781829833984375 3 Unmodified _IQQVRDFLT_ ENSG00000196878|ENST00000356082|LAMB3 10.823927491677226 0.5436922275383211 4 [TP]{I|L} 3 8 25.546 0.0 0.0 2.2838 0.0 0.0 0.0 804.3999884969247 804.3999884969247 3.9990362026716326 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2614393726401688 0.0 [TP]{I|L} 2.2838 - 27 1 1.461 44541.2 1.0 6786 4716 11501 HBL1_DMSO_200M_050219_2,11504 HBL1_DMSO_200M_050219_2,11504,IQQVRDFLT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11505 62.068 19.0 2207600.0 25 0 219580.0 + 10390 FSSSNMTVI 9 81 493.2367377439071 984.4589225546142 2 493.2370483279228 MULTI CID FTMS 0 0 0 11501 2229601.25 0.5600202974591253 1 -0.0597610473632812 4 Unmodified _FSSSNMTVI_ ENSG00000187950|ENST00000537054|OVCH1;nc|ENSG00000187950|Q7RTY7|OVCH1 11.640296217721598 0.521594087909532 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 3 6 25.942 0.0 0.0 2.6352 0.0 0.0 0.0 634.2522019337736 634.2522019337736 4.259687322722812 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 2.6352 - 75 1 1.461 38900.6 1.0 6787 4716 11501 HBL1_DMSO_200M_050219_2,11505 HBL1_DMSO_200M_050219_2,11505,FSSSNMTVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11506 62.069 27.0 1567500.0 25 0 211340.0 + 4331 DASAPRLMV 9 65 480.2518492078556 958.4891454825112 2 480.2526733279228 MULTI CID FTMS 0 0 0 11501 1561626.5 0.8166780226618291 1 -0.0597610473632812 5 Unmodified _DASAPRLMV_ ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 32.30548876998284 0.1201446275138228 4 {[DA]|[EG]}S 3 6 42.492 0.0 0.0 4.4332 0.0 0.0 0.0 682.3694609944831 682.3694609944831 20.65166884247504 0.0 0.0 0.0 0 1.0 2.0 0.6549471895720985 0.0 + {[DA]|[EG]}S 4.4332 + + 27 1 1.461 39430.4 1.0 6788 4716 11501 HBL1_DMSO_200M_050219_2,11506 HBL1_DMSO_200M_050219_2,11506,DASAPRLMV True True DASAPRLMV 62.069041 480.252673327923 32138500.0 11501.0 nc|ENSG00000009307|O75534-2|CSDE1;;nc|ENSG00000009307|O75534-3|CSDE1;;nc|ENSG00000009307|O75534-4|CSDE1;;ENSG00000009307|ENST00000358528|CSDE1 4.217138449350993 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11507 62.07 37.0 1619100.0 25 0 187070.0 -1 QAVGMWQVL 9 81 524.2695872806905 1046.524621628181 2 524.2704955935478 MULTI CID FTMS 0 0 0 11501 1476050.375 0.5575345857477153 -2 0.1589279174804687 6 Oxidation (M) _QAVGM(Oxidation (M))WQVL_ ENSG00000091428|ENST00000397081|RAPGEF4;nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;nc|ENSG00000091428|Q8WZA2-5|RAPGEF4 15.847184025352805 0.4077185912009129 4 [QA]V 3 -1 29.309 0.0 0.0 2.8006 0.0 0.0 0.0 745.3372491518716 745.3372491518716 10.140143618001218 0.0 0.0 0.0 0 1.0 0.6989700043360187 0.0 0.4247425010840047 [QA]V 2.8006 + + 83 1 1.461 50860.5 1.0 6789 4716 11501 HBL1_DMSO_200M_050219_2,11507 HBL1_DMSO_200M_050219_2,11507,QAVGMWQVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11508 62.071 37.0 1160900.0 25 0 153770.0 + 4542 DAYPNGLQV 9 79 488.740857420368 975.467161907536 2 488.7408325076103 MULTI CID FTMS 0 0 0 11501 1216744.5 0.3816600648926987 3 -0.2591896057128906 7 Unmodified _DAYPNGLQV_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 20.453626601364224 0.2830276176381075 4 [NP]G{I|L}Q 5 4 18.116 0.0 0.0 1.8572 0.0 0.0 0.0 463.1828656031016 463.1828656031016 1.5614860109619642 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 + [NP]G{I|L}Q 1.8572 + + 95 1 1.461 36597.3 1.0 6790 4716 11501 HBL1_DMSO_200M_050219_2,11508 HBL1_DMSO_200M_050219_2,11508,DAYPNGLQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11509 62.073 52.0 964920.0 25 0 63643.0 + 8114 EPHQVYVQI 9 75 556.7901851660614 1111.5658173989227 2 556.7906982302666 MULTI CID FTMS 0 0 0 11501 1112449.625 0.6018746335753182 2 -0.1460990905761718 8 Unmodified _EPHQVYVQI_ ENSG00000085840|ENST00000371568|ORC1 56.17704186161178 0.0281986971544335 4 {[QV]|[N{I|L}]|[RA]|[KV]}HPEYVQ{I|L} 9 4 + 45.314 0.0 0.0 4.0766 4.0766 68.727 0.0 0.0 0.0 2.430380486862944 2.64136888583522 2.430380486862944 2.430380486862944 0 0.6435078169319297 0.0 1.3807196863200843 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}HPEYVQ{I|L};[HQ]VPEYVQ{I|L};[Q{I|L}]{[{M(Oxidation (M))|F}C]|[YS]}VYVQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VYE{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VYE{[DS]|[MA]|[CV]|TT}Q{I|L};[HQ][EP]VYVQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}HY[EP]VQ{I|L};[VP][HQ]EYVQ{I|L};[HQ]VY[EP]VQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VYE{[DS]|[MA]|[CV]|TT}[AG]{I|L} 4.0766;3.858;3.844;3.839;3.5218;2.8917;2.64;2.5021;2.4213;2.3113 -;-;-;-;-;-;-;-;-;- 313 1 1.461 49277.7 1.0 6791 4716 11501 HBL1_DMSO_200M_050219_2,11509 HBL1_DMSO_200M_050219_2,11509,EPHQVYVQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11510 62.074 41.0 1604100.0 25 0 212470.0 + 35865 SVLKSIQEV 9 104 501.79564586639566 1001.5767387995912 2 501.7950622439384 MULTI CID FTMS 0 0 0 11501 1079971.75 0.1655465920461212 -3 0.2781829833984375 9 Unmodified _SVLKSIQEV_ ENSG00000039123|ENST00000230640|MTREX 45.739877483867886 0.0497104363764649 4 [VS]{I|L}KS{I|L}QEV 9 0 + 51.911 0.0 0.0 5.1829 5.1829 82.259 0.0 0.0 0.0 12.135132206667954 23.58999841915835 12.135132206667954 9.208187539523747 0 1.4564608101803795 2.0 0.4247425010840047 0.0 + + [VS]{I|L}KS{I|L}QEV;[VS]{I|L}KS{I|L}[AG]EV;[VS]{[MG]|[TS]}{I|L}SK{I|L}[PA];[VS]{[MG]|[TS]}{I|L}SK[PA]{I|L};{[TV]|[{I|L}S]}VKS{I|L}QEV;[VS]{I|L}KAA[VS]EV;[VS]{I|L}KS{[MG]|[TS]}{I|L}[PA];{[TV]|[{I|L}S]}KVS{I|L}QEV;[VS]{I|L}{[MG]|[TS]}SK[PA]{I|L};{[TV]|[{I|L}S]}VKS{I|L}{[MG]|[TS]}[PA] 5.1829;4.2636;3.6887;3.5468;3.3663;3.3498;3.066;3.013;2.9241;2.7514 +;-;-;-;-;-;-;-;-;- + 1000 1 1.461 56750.6 1.0 6792 4716 11501 HBL1_DMSO_200M_050219_2,11510 HBL1_DMSO_200M_050219_2,11510,SVLKSIQEV True True SVLKSIQEV 62.073943 501.795062243938 97404296.0 11501.0 ENSG00000039123|ENST00000230640|MTREX 4.951547781626384 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11511 62.076 69.0 993020.0 25 0 116650.0 + 28599 PVALAAEVL 9 80 441.7683182352048 881.5220835372097 2 441.7691833376884 MULTI CID FTMS 0 0 0 11501 737797.875 0.8278303206631525 12 -1.1339645385742188 10 Unmodified _PVALAAEVL_ REV__ENSG00000108479|ENST00000588479|GALK1;REV__ENST00000586733.1_1_17:73754139-73754584:-|nuORF 23.1484247019978 0.2366544122328345 4 VPAEV 5 -1 56.186 0.0 0.0 6.3737 0.0 0.0 0.0 383.2419222467407 383.2419222467407 31.177133942529167 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VPAEV 6.3737 - 128 + 1 1.461 60574.4 1.0 6793 4716 11501 HBL1_DMSO_200M_050219_2,11511 HBL1_DMSO_200M_050219_2,11511,PVALAAEVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11512 62.078 130.0 575960.0 25 0 48971.0 924 AFCEKSHLI 9 108 349.84908900802213 1046.5254376242665 3 349.8491088747978 MULTI CID FTMS 0 0 0 11501 471250.84375 0.5676266465754295 -2 0.1589279174804687 11 Unmodified _AFCEKSHLI_ ENSG00000145908|ENST00000274599|ZNF300;nc|ENSG00000145908|Q96RE9-2|ZNF300;nc|ENSG00000145908|Q96RE9-3|ZNF300;nc|ENSG00000145908|Q96RE9-4|ZNF300 11.640296217721598 0.521594087909532 4 [QA]V 3 8 15.814 0.0 0.0 1.5111 0.0 0.0 0.0 745.3377294545977 745.3377294545977 1.8348435778082024 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 [QA]V 1.5111 - 220 1 1.461 69093.4 1.0 6794 4716 11501 HBL1_DMSO_200M_050219_2,11512 HBL1_DMSO_200M_050219_2,11512,AFCEKSHLI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11513 62.08 87.0 457200.0 25 0 52724.0 + 34999 SQNNLQINV 9 81 515.26960043518 1028.52464793716 2 515.7706176638603 MULTI CID FTMS 0 0 0 11501 452648.09375 0.785173989234927 -2 0.1589279174804687 12 Unmodified _SQNNLQINV_ ENSG00000135968|ENST00000309863|GCC2;ENST00000393321.2_3_2:109102933-109106471:+|nuORF 18.1463463914782 0.3454829746528889 4 NV 2 7 15.433 0.0 0.0 1.5005 0.0 0.0 797.4021026264162 0.0 797.4021026264162 0.0 2.3341064903992503 0.0 0.0 0 0.0 0.0 0.0 0.5 + NV 1.5005 + + 48 + 1 1.461 35881.6 1.0 6795 4716 11501 HBL1_DMSO_200M_050219_2,11513 HBL1_DMSO_200M_050219_2,11513,SQNNLQINV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11514 62.083 145.0 550130.0 25 0 96313.0 + 6157 DSYYSIHQI 9 86 563.2640074891008 1124.5134620450017 2 563.2648803591728 MULTI CID FTMS 0 0 0 11501 381456.46875 0.7013986938980773 1 -0.0597610473632812 13 Unmodified _DSYYSIHQI_ ENSG00000168397|ENST00000404914|ATG4B;ENST00000465399.5_1_2:242577129-242594780:+|nuORF;ENST00000475195.5_1_2:242577129-242594181:+|nuORF;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;ENST00000483778.5_1_2:242577129-242598587:+|nuORF;ENST00000493618.5_1_2:242577129-242598937:+|nuORF;ENST00000494465.5_1_2:242592964-242606150:+|nuORF;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;nc|ENSG00000168397|Q9Y4P1-3|ATG4B;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;nc|ENSG00000168397|Q9Y4P1-6|ATG4B 32.78568957990786 0.1150597335874693 4 {[DS]|[MA]|[CV]|TT}YYS{I|L}HQ{I|L} 9 0 + 35.129 0.0 0.0 3.1239 3.1239 72.036 0.0 0.0 0.0 4.137342758552698 3.70251973310517 3.70251973310517 6.537982555808672 0 0.0 0.0 0.0 0.6747425010840047 + + {[DS]|[MA]|[CV]|TT}YYS{I|L}HQ{I|L};{[TV]|[{I|L}S]}A[C(Carbamidomethyl (C))M]PQ[YR];{[TV]|[{I|L}S]}HQP[C(Carbamidomethyl (C))M][RP];{[TV]|[{I|L}S]}A[C(Carbamidomethyl (C))M][MT]AQ{I|L};{[DS]|[MA]|[CV]|TT}YYS{I|L}HAAV;{[TV]|[{I|L}S]}A[C(Carbamidomethyl (C))M]P[AG][YR];{[DS]|[MA]|[CV]|TT}YYS{I|L}H[AG]{I|L};{[TV]|[{I|L}S]}H[AG]P[C(Carbamidomethyl (C))M][RP];{[TV]|[{I|L}S]}WCY[H{I|L}]{[CT]|[{M(Oxidation (M))|F}G]};{[TV]|[{I|L}S]}WC[C(Carbamidomethyl (C))R]{[MG]|[TS]}{I|L} 3.1239;2.5425;2.5083;2.2403;2.0778;1.7237;1.7051;1.6894;1.1649;0.77418 +;-;-;-;-;-;-;-;-;- + 292 + 1 1.461 66959.5 1.0 6796 4716 11501 HBL1_DMSO_200M_050219_2,11514 HBL1_DMSO_200M_050219_2,11514,DSYYSIHQI True True DSYYSIHQI 62.083076 563.264880359173 4510736.5 11501.0 nc|ENSG00000168397|Q9Y4P1-6|ATG4B;;ENST00000493618.5_1_2:242577129-242598937:+|nuORF;;ENST00000465399.5_1_2:242577129-242594780:+|nuORF;;ENSG00000168397|ENST00000404914|ATG4B;;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;;ENST00000494465.5_1_2:242592964-242606150:+|nuORF;;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;;nc|ENSG00000168397|Q9Y4P1-3|ATG4B;;ENST00000475195.5_1_2:242577129-242594181:+|nuORF;;ENST00000483778.5_1_2:242577129-242598587:+|nuORF 6.357058525085449 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11515 62.087 222.0 466040.0 25 0 32027.0 + -1 YECLYSSEL 9 120 582.2524895864838 1162.4904262397674 2 582.2532836794853 MULTI CID FTMS 0 0 0 11501 304649.25 0.3475417938502548 -2 0.1589279174804687 14 Carbamidomethyl (C) _YEC(Carbamidomethyl (C))LYSSEL_ REV__ENSG00000127241|ENST00000296280|MASP1;REV__ENST00000460839.5_1_3:186974439-187003786:-|nuORF;REV__nc|ENSG00000127241|P48740-3|MASP1;REV__nc|ENSG00000127241|P48740|MASP1 23.1484247019978 0.2366544122328345 4 [DN]EYSE 6 -1 33.02 0.0 0.0 2.8405 0.0 0.0 0.0 422.2157686822876 422.2157686822876 2.575156255085389 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 [DN]EYSE 2.8405 - 539 + 1 1.461 83528.1 1.0 6797 4716 11501 HBL1_DMSO_200M_050219_2,11515 HBL1_DMSO_200M_050219_2,11515,YECLYSSEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11516 62.091 212.0 854280.0 25 0 71144.0 -1 AYVHMVTHF 9 151 374.1797164042758 0 374.1796142458916 PEAK CID FTMS 0 0 0 11501 292293.0 0.1479810394436124 -2 0.1589279174804687 15 Oxidation (M) _AYVHM(Oxidation (M))VTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 29.84058131909904 0.1118629134628069 4 A 1 -1 6.9897 0.0 0.0 0.93652 0.0 0.0 540.2386919864829 132.04596887760002 672.2846608640829 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.93652 + + 158 + 1 1.461 148697.9 1.0 6798 4716 11501 HBL1_DMSO_200M_050219_2,11516 HBL1_DMSO_200M_050219_2,11516,AYVHMVTHF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11517 62.093 84.0 632040.0 25 0 44935.0 9315 FIGTPYWM 8 89 507.7406004130432 1013.4666478928864 2 507.7415649294853 MULTI CID FTMS 0 0 0 11501 240350.9375 1.0 0 0.0 16 Unmodified _FIGTPYWM_ ENSG00000011566|ENST00000263881|MAP4K3;ENSG00000012983|ENST00000682126|MAP4K5;ENSG00000065613|ENST00000369755|SLK;ENSG00000071054|ENST00000324219|MAP4K4;ENSG00000072786|ENST00000176763|STK10;ENSG00000104814|ENST00000396857|MAP4K1;ENSG00000123572|ENST00000243300|NRK;ENSG00000141503|ENST00000355280|MINK1;ENSG00000154310|ENST00000436636|TNIK;ENSG00000168067|ENST00000294066|MAP4K2;ENST00000476609.1_1_2:102441885-102476398:+|nuORF;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;nc|ENSG00000011566|Q8IVH8-3|MAP4K3;nc|ENSG00000065613|Q9H2G2-2|SLK;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000104814|Q92918|MAP4K1;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;nc|ENSG00000168067|Q12851-2|MAP4K2 11.114462752807354 0.7467182956244686 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KT]YQSM 8 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KT]Y + + 21.427 -12.553 -1.9332 2.1142 2.1142 44.673 0.0 0.0 0.0 0.0 4.973024840566467 0.0 0.0 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KT]YQSM 2.1142 - 102 + 1 1.461 46506.3 1.0 6799 4716 11501 HBL1_DMSO_200M_050219_2,11517 HBL1_DMSO_200M_050219_2,11517,FIGTPYWM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11518 62.099 303.0 355930.0 25 0 40717.0 37370 TKSSVTGK 8 141 404.2328767919419 806.4512006506839 2 404.2326843142509 MULTI CID FTMS 0 0 0 11501 230062.21875 0.8429222439345763 -2 0.1589279174804687 17 Unmodified _TKSSVTGK_ ENSG00000106278|ENST00000393386|PTPRZ1;nc|ENSG00000106278|P23471-2|PTPRZ1 4.3292370932331545 0.7980541185046766 4 {I|L} 1 8 11.42 0.0 0.0 1.4161 0.0 0.0 675.3559990899402 0.0 675.3559990899402 0.0 2.494202522064493 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4161 - 27 + 1 1.461 86563.3 1.0 6800 4716 11501 HBL1_DMSO_200M_050219_2,11518 HBL1_DMSO_200M_050219_2,11518,TKSSVTGK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11519 62.104 266.0 350430.0 25 0 44639.0 + 5902 DPYKVYRIV 9 109 384.8853134716828 1151.6341110152484 3 384.8854553103447 MULTI CID FTMS 0 0 0 11501 220009.859375 0.0141832203889225 7 -0.6196517944335938 18 Unmodified _DPYKVYRIV_ chr6:405130-406766|28|10.18|0.09|6.76|+|ENST00000493114|IRF4,IRF4;ENSG00000137265|ENST00000380956|IRF4;ENST00000495137.5_1_6:394829-397293:+|nuORF;nc|ENSG00000137265|Q15306-2|IRF4 24.020572477871973 0.2255576514309169 4 DPYKVY[R{I|L}]V 9 0 + 60.238 0.0 0.0 5.2306 5.2306 71.329 0.0 0.0 0.0 47.76335593819582 0.9421249706470292 0.9421249706470292 1.383026981662816 0 0.1643943297944484 1.6989700043360187 0.0 0.0 + + DPYKVY[R{I|L}]V;DPYKVY[RV]{I|L};DPYKVV[YR]{I|L} 5.2306;5.1105;5.0418 +;-;- + 97 + 1 1.461 81694.5 1.0 6801 4716 11501 HBL1_DMSO_200M_050219_2,11519 HBL1_DMSO_200M_050219_2,11519,DPYKVYRIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11520 62.106 128.0 677450.0 25 0 63233.0 44538 YPELPSQLEL 10 113 396.8774337096648 1187.6104717291944 3 396.8785278201103 MULTI CID FTMS 0 0 0 11501 180219.234375 0.3117859474931601 -2 0.1589279174804687 19 Unmodified _YPELPSQLEL_ ENSG00000152223|ENST00000282041|EPG5;ENST00000587974.1_1_18:43487913-43547205:-|nuORF;nc|ENSG00000152223|Q9HCE0-2|EPG5 26.020703789607367 0.3840598856887971 4 EEQ{[RE]|[WV]}HY{I|L} 8 8 31.407 0.0 0.0 2.6445 0.0 0.0 85.08995253730625 0.0 85.08995253730625 0.0 13.782219943571755 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 EEQ{[RE]|[WV]}HY{I|L} 2.6445 - 570 1 1.461 71659.6 1.0 6802 4716 11501 HBL1_DMSO_200M_050219_2,11520 HBL1_DMSO_200M_050219_2,11520,YPELPSQLEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11521 62.12 783.0 156640.0 25 0 35947.0 + -1 CDFTEMCADYV 11 119 677.2428911502326 1352.471229367265 2 677.2449828982353 MULTI CID FTMS 0 0 0 11501 180502.53125 0.6038481397587757 -2 0.1589279174804687 20 Carbamidomethyl (C) _C(Carbamidomethyl (C))DFTEMCADYV_ REV__ENSG00000120910|ENST00000240139|PPP3CC;REV__nc|ENSG00000120910|P48454-2|PPP3CC;REV__nc|ENSG00000120910|P48454-3|PPP3CC 9.38312468134398 0.8308777417566128 4 YE[SG]EMYV 8 -1 49.175 0.0 0.0 3.636 0.0 0.0 376.0876637189469 0.0 376.0876637189469 0.0 34.57116601236436 0.0 0.0 0 0.5 0.0 1.055462187404089 0.0 YE[SG]EMYV 3.636 - 428 1 1.461 91864.2 1.0 6803 4716 11501 HBL1_DMSO_200M_050219_2,11521 HBL1_DMSO_200M_050219_2,11521,CDFTEMCADYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11523 62.124 90.0 766100.0 25 0 86361.0 + 2379 AQMDYYGTRL 10 66 609.2847853388813 1216.5550177445623 2 609.2852661013603 MULTI CID FTMS 0 0 0 11522 920014.3125 0.758868649613215 2 -0.1994285583496093 1 Unmodified _AQMDYYGTRL_ ENSG00000157020|ENST00000350697|SEC13;ENST00000397099.1_1_3:10357003-10360966:-|nuORF;ENST00000397102.5_1_3:10355120-10362775:-|nuORF;ENST00000397105.7_1_3:10353516-10362775:-|nuORF;ENST00000477547.6_1_3:10345637-10359739:-|nuORF;nc|ENSG00000157020|P55735-2|SEC13;nc|ENSG00000157020|P55735-3|SEC13;nc|ENSG00000157020|P55735-4|SEC13 34.221707139014875 0.2185845369562963 4 [QA]{I|L}D[KC]{I|L}DM 9 7 45.436 0.0 0.0 3.7348 0.0 0.0 0.0 196.0710544269979 196.0710544269979 28.44145110727045 0.0 0.0 0.0 0 0.75 0.958607314841775 0.0 0.4247425010840047 [QA]{I|L}D[KC]{I|L}DM 3.7348 - 170 1 1.461 59226.3 1.0 6804 4717 11522 HBL1_DMSO_200M_050219_2,11523 HBL1_DMSO_200M_050219_2,11523,AQMDYYGTRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11524 62.138 800.0 270100.0 25 0 27996.0 + 14083 IAPPSHLI 8 188 424.2556894003791 846.4968258675582 2 424.2560607790947 MULTI CID FTMS 0 0 0 11522 140629.984375 0.5084020056539078 -2 0.13916015625 2 Unmodified _IAPPSHLI_ ENSG00000073282|ENST00000264731|TP63;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;nc|ENSG00000073282|Q9H3D4-10|TP63;nc|ENSG00000073282|Q9H3D4-11|TP63;nc|ENSG00000073282|Q9H3D4-12|TP63;nc|ENSG00000073282|Q9H3D4-2|TP63;nc|ENSG00000073282|Q9H3D4-3|TP63;nc|ENSG00000073282|Q9H3D4-4|TP63;nc|ENSG00000073282|Q9H3D4-5|TP63;nc|ENSG00000073282|Q9H3D4-6|TP63;nc|ENSG00000073282|Q9H3D4-7|TP63;nc|ENSG00000073282|Q9H3D4-8|TP63;nc|ENSG00000073282|Q9H3D4-9|TP63 36.46614268402704 0.2934124525509074 4 [{I|L}A]{I|L}[HS]PP{I|L} 8 4 + 47.33 0.0 0.0 5.5912 5.5912 85.025 0.0 0.0 0.0 18.773043837969325 9.542425094393243 9.542425094393243 9.542425094393243 0 0.4247425010840047 2.0 0.5 0.0 [{I|L}A]{I|L}[HS]PP{I|L};[{I|L}A]{I|L}[HS]P{I|L}P;[{I|L}A]P[PS]H{I|L}{I|L};[{I|L}A]{I|L}{NN|[MP]|[D{I|L}]|[EV]}R{M(Oxidation (M))|F} 5.5912;4.4639;4.3194;3.4334 -;-;+;- + 361 + 1 1.461 170026.0 0.8500000238418579 6805 4717 11522 HBL1_DMSO_200M_050219_2,11524 HBL1_DMSO_200M_050219_2,11524,IAPPSHLI False True IAPPSHLI 62.137903 424.256060779095 6204529.5 11522.0 nc|ENSG00000073282|Q9H3D4-8|TP63;;nc|ENSG00000073282|Q9H3D4-2|TP63;;nc|ENSG00000073282|Q9H3D4-7|TP63;;nc|ENSG00000073282|Q9H3D4-6|TP63;;nc|ENSG00000073282|Q9H3D4-11|TP63;;nc|ENSG00000073282|Q9H3D4-4|TP63;;nc|ENSG00000073282|Q9H3D4-12|TP63;;nc|ENSG00000073282|Q9H3D4-5|TP63;;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;;nc|ENSG00000073282|Q9H3D4-9|TP63;;nc|ENSG00000073282|Q9H3D4-10|TP63;;ENSG00000073282|ENST00000264731|TP63;;nc|ENSG00000073282|Q9H3D4-3|TP63 4.76886510848999 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11525 62.139 9.5 6282700.0 25 0 540890.0 + 22352 LPSPLKQTI 9 91 498.8081792005347 995.6018054678694 2 498.8082153201103 MULTI CID FTMS 0 0 0 11522 5118801.0 0.0193199967860904 -10 0.9514274597167968 3 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 65.47368725323818 0.0230515101691092 4 {I|L}PSP{I|L}KQT{I|L} 9 0 + 93.698 0.0 0.0 9.4112 9.4112 93.641 0.0 0.0 0.0 70.40619828850681 13.46787486224656 13.46787486224656 9.208187539523747 0 1.6549471895720984 1.6989700043360187 1.0138793319624575 0.0 + + {I|L}PSP{I|L}KQT{I|L};{I|L}PSP{I|L}K[AG]T{I|L};[{I|L}P]SKQT[{I|L}P]{I|L};[PS]{I|L}KQT[{I|L}P]{I|L};[PS]{I|L}KQP{I|L}T{I|L};[{I|L}P]SKQP{I|L}T{I|L};[{I|L}P]KQST[{I|L}P]{I|L};[{I|L}P]KQSP{I|L}T{I|L};[{I|L}P]SK[AG]T[{I|L}P]{I|L};[PS]{I|L}K[AG]T[{I|L}P]{I|L} 9.4112;8.4863;5.3834;5.3834;5.3565;5.3565;4.7314;4.7045;4.4585;4.4585 +;-;-;-;-;-;-;-;-;- + 558 + 1 1.461 52320.8 1.0 6806 4717 11522 HBL1_DMSO_200M_050219_2,11525 HBL1_DMSO_200M_050219_2,11525,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11526 62.14 26.0 2300200.0 25 0 174040.0 + 24890 MPNPSLAQV 9 100 478.7472355152565 955.479918097313 2 478.7475768923759 MULTI CID FTMS 0 0 0 11522 1707696.25 0.3156069329442373 -3 0.21868896484375 4 Unmodified _MPNPSLAQV_ ENSG00000152240|ENST00000282058|HAUS1;nc|ENSG00000152240|Q96CS2-2|HAUS1 36.12702656103203 0.0967173616627612 4 [NP]M[PS]{I|L}AQV 9 2 + 34.427 0.0 0.0 3.6031 3.6031 67.498 0.0 0.0 0.0 2.6093092803169107 9.889917747712651 2.6093092803169107 2.6093092803169107 0 0.535666875892183 0.0 0.6861818737241735 0.3054621874040891 [NP]M[PS]{I|L}AQV;{NN|[MP]|[D{I|L}]|[EV]}AP{[QD]|[EN]|[WG]|[KD]|[RS]}AQV;[NP][PS]M{I|L}AQV;[NP][WE]{I|L}AQV;[NP][PS]{I|L}MAQV;[VP]T[NP]MAQV;{NN|[MP]|[D{I|L}]|[EV]}[H{I|L}]TMQV;[{I|L}T][PG][NP]MQV;{NN|[MP]|[D{I|L}]|[EV]}AP[WQ]QV;[NP][PS]{I|L}AMQV 3.6031;3.3301;2.973;2.9251;2.6405;2.5329;1.9846;1.9695;1.9339;1.7887 -;-;-;-;-;-;-;-;-;- 391 1 1.461 51295.8 1.0 6807 4717 11522 HBL1_DMSO_200M_050219_2,11526 HBL1_DMSO_200M_050219_2,11526,MPNPSLAQV True True MPNPSLAQV 62.140259 478.747576892376 111587280.0 11522.0 nc|ENSG00000152240|Q96CS2-2|HAUS1;;ENSG00000152240|ENST00000282058|HAUS1 5.8643849690755205 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11527 62.142 67.0 728130.0 25 0 56957.0 + 4692 DCVCFNNVSI 10 91 557.2389333623313 1112.4633137914625 2 557.2395507693291 MULTI CID FTMS 0 0 0 11522 577284.6875 1.0 0 0.0 5 Unmodified _DCVCFNNVSI_ REV__ENSG00000149212|ENST00000536441|SESN3;REV__nc|ENSG00000149212|P58005-3|SESN3;REV__nc|ENSG00000149212|P58005-4|SESN3 16.149105407346934 0.5765757077271437 4 VYWWS{I|L} 6 -1 30.996 0.0 0.0 2.7863 0.0 0.0 260.04340519946874 0.0 260.04340519946874 0.0 16.313710676341397 0.0 0.0 0 0.5 0.0 1.2887254899964358 0.0 VYWWS{I|L} 2.7863 - 233 + 1 1.461 44055.3 1.0 6808 4717 11522 HBL1_DMSO_200M_050219_2,11527 HBL1_DMSO_200M_050219_2,11527,DCVCFNNVSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11528 62.144 127.0 839660.0 25 0 93116.0 + 932 AFIDQSQSL 9 138 504.75338894443706 1007.492224955674 2 504.7541686892509 MULTI CID FTMS 0 0 0 11522 396400.125 0.0091066976799707 -4 0.3379440307617187 6 Unmodified _AFIDQSQSL_ ENSG00000167325|ENST00000300738|RRM1 28.486842064014134 0.1687311288560894 4 S{I|L} 2 7 18.85 0.0 0.0 1.871 0.0 0.0 789.3649799378992 0.0 789.3649799378992 0.0 5.653885428287378 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 + S{I|L} 1.871 + + 801 + 1 1.461 82826.2 1.0 6809 4717 11522 HBL1_DMSO_200M_050219_2,11528 HBL1_DMSO_200M_050219_2,11528,AFIDQSQSL False True AFIDQSQSL 62.144469 504.754168689251 693980096.0 11522.0 ENSG00000167325|ENST00000300738|RRM1 3.0083411931991577 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11529 62.148 197.0 366300.0 25 0 18613.0 + 29899 SEGDAYPNGLQV 12 110 625.2883763195946 1248.562199705989 2 625.2888061404228 MULTI CID FTMS 0 0 0 11522 338487.875 0.6087005486143924 -2 0.13916015625 7 Unmodified _QSDEYSFVFK_ ENSG00000117298|ENST00000374893|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF 18.373094154950223 0.5392593366289069 4 [AG]V[PG]QVHNQ 10 10 35.149 0.0 0.0 2.8152 0.0 0.0 0.0 258.0548504230391 258.0548504230391 8.114358703235311 0.0 0.0 0.0 0 0.0 2.0 0.0 0.2742275032520141 [AG]V[PG]QVHNQ 2.8152 - 1054 1 1.461 59975.1 1.0 6810 4717 11522 HBL1_DMSO_200M_050219_2,11529 HBL1_DMSO_200M_050219_2,11529,QSDEYSFVFK False False SEGDAYPNGLQV 62.148255 625.288806140423 9066837.0 11522.0 ENSG00000117298|ENST00000374893|ECE1;;nc|ENSG00000117298|P42892-3|ECE1;;nc|ENSG00000117298|P42892-4|ECE1;;ENST00000526194.5_1_1:21560049-21616919:-|nuORF 7.236265023549397 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11530 62.158 575.0 512420.0 25 0 69480.0 + 16344 IYLPGRPTSM 10 166 567.8028513452493 1133.5911497572986 2 567.8039428591728 MULTI CID FTMS 0 0 0 11522 292380.21875 0.5684712836898742 -1 0.0597610473632812 8 Unmodified _IYLPGRPTSM_ ENSG00000102858|ENST00000262370|MGRN1;nc|ENSG00000102858|O60291-3|MGRN1 45.69961567697781 0.105390671673896 4 {I|L}Y{I|L}P 4 6 54.157 0.0 0.0 4.7774 0.0 0.0 0.0 644.2838608725598 644.2838608725598 38.596981436199016 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {I|L}Y{I|L}P 4.7774 + + 524 + 1 1.461 217838.5 1.0 6811 4717 11522 HBL1_DMSO_200M_050219_2,11530 HBL1_DMSO_200M_050219_2,11530,IYLPGRPTSM True True IYLPGRPTSM 62.15834 567.803942859173 3842268.25 11522.0 ENSG00000102858|ENST00000262370|MGRN1;;nc|ENSG00000102858|O60291-3|MGRN1 1.5743724902470906 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11531 62.162 170.0 604100.0 25 0 39812.0 + 9659 FLPPPSRTV 9 119 507.29155646900193 1012.568560004804 2 507.2931701540947 MULTI CID FTMS 0 0 0 11522 240373.640625 0.4768422413199901 -8 0.7393264770507812 9 Unmodified _FLPPPSRTV_ REV__ENST00000565336.1_1_1:94313579-94313903:+|nuORF 20.453626601364224 0.2830276176381075 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PE 4 -1 29.279 0.0 0.0 2.8915 0.0 0.0 0.0 523.3021966177123 523.3021966177123 14.58607314841775 0.0 0.0 0.0 0 0.3494850021680094 0.958607314841775 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PE 2.8915 - 145 + 1 1.461 85827.3 1.0 6812 4717 11522 HBL1_DMSO_200M_050219_2,11531 HBL1_DMSO_200M_050219_2,11531,FLPPPSRTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11532 62.165 150.0 391890.0 25 0 50964.0 27785 PLPPPPPLA 9 96 449.7732923312103 897.5320317292206 2 449.7739440798759 MULTI CID FTMS 0 0 0 11522 211168.546875 0.252826671050686 15 -1.3955307006835938 10 Unmodified _PLPPPPPLA_ ENSG00000176182|ENST00000322217|MYPOP;REV__ENSG00000110721|ENST00000265689|CHKA;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__nc|ENSG00000110721|P35790-2|CHKA;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3 36.46614268402704 0.0948557732959553 4 [{I|L}P][YK]P 5 6 23.345 0.0 0.0 2.601 0.0 0.0 0.0 296.16157347269603 296.16157347269603 11.126342309407544 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 [{I|L}P][YK]P 2.601 - 39 1 1.461 50166.0 1.0 6813 4717 11522 HBL1_DMSO_200M_050219_2,11532 HBL1_DMSO_200M_050219_2,11532,PLPPPPPLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11533 62.171 367.0 1508700.0 25 0 153250.0 40366 VHTAETNV 8 191 435.7186695609085 869.4227861886169 2 435.7191039919853 MULTI CID FTMS 0 0 0 11522 168084.078125 0.7552386197813277 -1 0.0597610473632812 11 Unmodified _VHTAETNV_ ENST00000263640.7_1_2:158593781-158593970:-|nuORF 26.88365393820708 0.4786498634179528 4 VHMVTH{M(Oxidation (M))|F} 7 5 + 73.458 0.0 0.0 8.449 8.449 94.079 0.0 0.0 0.0 10.52862378579958 10.52862378579958 10.52862378579958 10.52862378579958 0 1.7786596949921218 1.3979400086720375 0.899649864804614 0.0 VHMVTH{M(Oxidation (M))|F};[HV]MTVH{M(Oxidation (M))|F};[HV]TMVH{M(Oxidation (M))|F};[HV]MTHV{M(Oxidation (M))|F};[HV]TMHV{M(Oxidation (M))|F};[HV]MVTH{M(Oxidation (M))|F};VH{M(Oxidation (M))|F}H[PS]{M(Oxidation (M))|F};[HV]MTH{M(Oxidation (M))|F}V;[HV]TMH{M(Oxidation (M))|F}V;[HV]MT{M(Oxidation (M))|F}HV 8.449;7.2381;7.1236;6.8963;6.7819;6.7187;6.5976;6.0798;5.9653;5.9066 -;-;-;-;-;-;-;-;-;- 1589 + 1 1.461 419354.5 1.0 6814 4717 11522 HBL1_DMSO_200M_050219_2,11533 HBL1_DMSO_200M_050219_2,11533,VHTAETNV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11534 62.178 335.0 461670.0 25 0 29347.0 30277 QYPEGYLEA 9 188 535.2457920672643 1068.4770312013286 2 535.2460204958916 MULTI CID FTMS 0 0 0 11522 156622.15625 0.5510086378658647 -11 1.0555534362792969 12 Unmodified _QYPEGYLEA_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENSG00000276043|ENST00000650932|UHRF1;ENST00000540175.1_1_12:20704556-20705942:+|nuORF;nc|ENSG00000276043|Q96T88-2|UHRF1 18.1463463914782 0.3454829746528889 4 {[TV]|[{I|L}S]}DMQY{I|L}{[CP]|[EA]} 9 5 + 36.331 0.0 0.0 3.4003 3.4003 70.945 0.0 0.0 0.0 4.872118693881546 2.632192780232785 2.632192780232785 4.872118693881546 0 0.0 1.3979400086720375 0.4916440611282626 0.7134679910804405 {[TV]|[{I|L}S]}DMQY{I|L}{[CP]|[EA]};{NN|[MP]|[D{I|L}]|[EV]}SMQY{I|L}{[CP]|[EA]};[VS]EMQY{I|L}{[CP]|[EA]};[EP]GYQY{I|L}{[CP]|[EA]};{[TV]|[{I|L}S]}DMYQ{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}YQMPEA;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}YQMEPA;[PG]EYQY{I|L}{[CP]|[EA]};[{M(Oxidation (M))|F}V]{[CP]|[EA]}QY{I|L}{[CP]|[EA]};{NN|[MP]|[D{I|L}]|[EV]}SMYQ{I|L}{[CP]|[EA]} 3.4003;2.9443;2.7795;2.6888;2.6041;2.4565;2.216;2.189;2.1515;2.1481 -;-;-;-;-;-;-;-;-;- 1741 1 1.461 124919.0 1.0 6815 4717 11522 HBL1_DMSO_200M_050219_2,11534 HBL1_DMSO_200M_050219_2,11534,QYPEGYLEA False True ALGPDGKLVTV 62.178492 535.2458 1815964.75 11522.0 ENSG00000138073|ENST00000260643|PREB;;ENST00000474802.1_1_2:27355436-27356101:-|nuORF;;ENST00000468045.5_1_2:27354838-27356101:-|nuORF 2.897493282953898 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11535 62.192 800.0 502170.0 25 0 47993.0 22700 LQEMEDNQY 9 194 585.2433405095412 1168.4721280858823 2 585.2427856326103 MULTI CID FTMS 0 0 0 11522 119428.1953125 0.4746442359299774 -2 0.13916015625 13 Unmodified _LQEMEDNQY_ ENSG00000156345|ENST00000325303|CDK20;ENST00000459720.5_1_9:90585689-90589466:-|nuORF;ENST00000603475.1_1_9:90586022-90589145:-|nuORF;ENST00000604175.5_1_9:90586022-90589430:-|nuORF;nc|ENSG00000156345|Q8IZL9-2|CDK20;nc|ENSG00000156345|Q8IZL9-3|CDK20;nc|ENSG00000156345|Q8IZL9-4|CDK20;nc|ENSG00000156345|Q8IZL9-5|CDK20 26.268140514670165 0.1969607489560049 4 Y{M(Oxidation (M))|F}{I|L}DY[QA]SY 9 7 + 84.222 0.0 0.0 7.2079 7.2079 92.256 0.0 0.0 0.0 67.72196443756445 14.09256854528806 14.09256854528806 12.83809673312028 0 1.9916440611282624 0.0 1.372363747448347 0.25 Y{M(Oxidation (M))|F}{I|L}DY[QA]SY;Y{M(Oxidation (M))|F}{I|L}DP[HQ]SY;Y{M(Oxidation (M))|F}{I|L}DY[QT]GY;Y{M(Oxidation (M))|F}{I|L}YD[QA]SY;Y{M(Oxidation (M))|F}{I|L}DPSAHGY;Y{M(Oxidation (M))|F}{I|L}DPSAENN;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}ASPD{I|L}EY;Y{M(Oxidation (M))|F}Y{I|L}D[QA]SY;Y{M(Oxidation (M))|F}{I|L}DPSAEMP;Y{M(Oxidation (M))|F}{I|L}YD[QT]GY 7.2079;6.1092;5.9799;5.8101;5.3484;5.2096;5.2036;5.1091;4.6534;4.5821 -;-;-;-;-;-;-;-;-;- 5190 + 1 1.461 293200.9 0.8999999761581421 6816 4717 11522 HBL1_DMSO_200M_050219_2,11535 HBL1_DMSO_200M_050219_2,11535,LQEMEDNQY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11536 62.206 800.0 210480.0 25 0 24586.0 + 40468 VINPTLPA 8 202 412.7464630287568 823.4783731243135 2 412.7456237673759 MULTI CID FTMS 0 0 0 11522 108337.3828125 1.0 0 0.0 14 Unmodified _VINPTLPA_ REV__ENSG00000103043|ENST00000261776|VAC14 5.760428011301431 0.7893668129297577 4 V 1 -1 8.5387 0.0 0.0 1.0369 0.0 0.0 706.3986821226518 0.0 706.3986821226518 0.0 0.1100638650936893 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0369 + + 59 + 1 1.461 132041.8 0.6700000166893005 6817 4717 11522 HBL1_DMSO_200M_050219_2,11536 HBL1_DMSO_200M_050219_2,11536,VINPTLPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11538 62.21 4.1 13807000.0 25 0 1726800.0 + 3412 AYVHMVTHF 9 76 552.7680460743543 1103.5215392155085 2 552.7685424685478 MULTI CID FTMS 0 0 0 11537 13945654.0 1.0 0 0.0 1 Unmodified _AYVHMVTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 77.98433622928108 0.0180125044636492 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMVTH{M(Oxidation (M))|F} 9 0 + 71.947 0.0 0.0 6.5198 6.5198 91.056 0.0 0.0 0.0 41.30001899740286 7.179250024847264 7.179250024847264 18.29812217439504 0 2.2104093769761874 2.0 0.0 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMVTH{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMVD[RN];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMVD[NG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHYHV{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHYH[PA]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{[{M(Oxidation (M))|F}H]|[RQ]}[PS]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHYH{[ES]|[DT]|[{I|L}C]}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHY[PA]H{M(Oxidation (M))|F};[HV]M{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VTH{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}[VS]MVTH{M(Oxidation (M))|F} 6.5198;4.8616;4.3878;3.9965;3.8359;3.774;3.5885;3.5809;2.9671;2.1949 +;-;-;-;-;-;-;-;-;- + 278 + 1 1.455 50537.9 1.0 6818 4718 11537 HBL1_DMSO_200M_050219_2,11538 HBL1_DMSO_200M_050219_2,11538,AYVHMVTHF True True AYVHMVTHF 62.210425 552.768542468548 778098304.0 11537.0 nc|ENSG00000139644|P55061-2|TMBIM6;;ENSG00000139644|ENST00000267115|TMBIM6 9.154359181722006 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11539 62.212 11.0 3273800.0 25 0 377480.0 -1 YMIDPSGVSY 10 64 574.2522709111895 1146.489988889179 2 574.2530395388603 MULTI CID FTMS 0 0 0 11537 5126077.0 1.0 0 0.0 2 Oxidation (M) _YM(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 25.399314129420983 0.3980215340001851 4 [DN]VV[C(Carbamidomethyl (C))K]YSY 9 -1 [DN]VV[C(Carbamidomethyl (C))K]Y + + 29.222 0.24568 0.02797 2.5488 2.5488 45.157 0.0 0.0 0.0 0.0 18.764100213633768 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 [DN]VV[C(Carbamidomethyl (C))K]YSY 2.5488 - 80 + 1 1.455 35487.1 1.0 6819 4718 11537 HBL1_DMSO_200M_050219_2,11539 HBL1_DMSO_200M_050219_2,11539,YMIDPSGVSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11540 62.213 27.0 1691200.0 25 0 133940.0 + 24904 MPNTRPPII 9 73 519.791170775148 1037.567788617096 2 519.7928344607353 MULTI CID FTMS 0 0 0 11537 1884315.125 0.2805250546329436 8 -0.791046142578125 3 Unmodified _MPNTRPPII_ ENSG00000084774|ENST00000264705|CAD 21.53697664764585 0.2571576504437394 4 MPNTR 5 4 58.443 0.0 0.0 5.6327 0.0 0.0 0.0 435.26203333072505 435.26203333072505 43.83925646871916 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + MPNTR 5.6327 + + 28 + 1 1.455 42325.5 1.0 6820 4718 11537 HBL1_DMSO_200M_050219_2,11540 HBL1_DMSO_200M_050219_2,11540,MPNTRPPII False True MPNTRPPII 62.212783 519.792834460735 597087880.0 11537.0 ENSG00000084774|ENST00000264705|CAD 6.853499253590901 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11541 62.214 22.0 2004000.0 25 0 299790.0 + 39891 VFMHVSTAY 9 75 527.7546519488697 1053.4947509645392 2 527.7564575076103 MULTI CID FTMS 0 0 0 11537 1859689.0 0.2955058125862036 -2 0.1460990905761718 4 Unmodified _VFMHVSTAY_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 34.18733598223924 0.1073653526364521 4 [QA]AT[PA]{M(Oxidation (M))|F}VSY 10 9 + 41.375 0.0 0.0 3.9274 3.9274 68.565 0.0 0.0 0.0 2.6240221278676685 2.6240221278676685 2.6240221278676685 2.6240221278676685 0 0.0 0.0 0.5 0.0 [QA]AT[PA]{M(Oxidation (M))|F}VSY;[HM]V{M(Oxidation (M))|F}V{[MG]|[TS]}AY;[QA]AT[PA]V{M(Oxidation (M))|F}SY;[QA]AV[WM]VSY;[HM]{M(Oxidation (M))|F}VV{[MG]|[TS]}AY;[HM]V{M(Oxidation (M))|F}{[WT]|[RM]}AY;[QA]VA[WM]VSY;[HM]{M(Oxidation (M))|F}V{[WT]|[RM]}AY;[HV]M{M(Oxidation (M))|F}V{[MG]|[TS]}AY;[HV]M{M(Oxidation (M))|F}{[WT]|[RM]}AY 3.9274;3.6783;3.6417;3.5931;3.3926;3.0634;2.9514;2.7777;2.4265;1.8116 -;-;-;-;-;-;-;-;-;- 184 + 1 1.455 41546.6 1.0 6821 4718 11537 HBL1_DMSO_200M_050219_2,11541 HBL1_DMSO_200M_050219_2,11541,VFMHVSTAY True True VFMHVSTAY 62.213961 527.75645750761 42279504.0 11537.0 ENST00000524933.1_1_11:13716477-13732426:+|nuORF;;ENSG00000197601|ENST00000354817|FAR1 8.555864969889322 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11542 62.215 52.0 1327400.0 25 0 161970.0 + 41622 VPPPLAKAI 9 75 453.2945236289187 904.5744943246374 2 453.2949401736259 MULTI CID FTMS 0 0 0 11537 1276762.5 0.940921677834667 1 -0.1130905151367187 5 Unmodified _VPPPLAKAI_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;ENST00000588913.5_1_19:10244345-10246231:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 34.10243960390752 0.1078313939113124 4 VPP[{I|L}P]AKA{I|L} 9 0 + 57.858 0.0 0.0 6.3962 6.3962 83.365 0.0 0.0 0.0 33.913187455970544 7.412669627871864 7.412669627871864 6.020599913279625 0 0.4247425010840047 2.0 0.0 0.0 + + VPP[{I|L}P]AKA{I|L};VP{I|L}{[HG]|PP}AKA{I|L} 6.3962;5.7306 +;- + 313 + 1 1.455 58449.2 1.0 6822 4718 11537 HBL1_DMSO_200M_050219_2,11542 HBL1_DMSO_200M_050219_2,11542,VPPPLAKAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11543 62.217 67.0 669530.0 25 0 114420.0 21314 LPESGRVR 8 76 457.26420380462406 912.513854676048 2 457.2646972537041 MULTI CID FTMS 0 0 0 11537 804091.0625 0.6421884505823466 -6 0.4931373596191406 6 Unmodified _LPESGRVR_ ENSG00000169641|ENST00000302291|LUZP1 2.577480529830294 0.808687252328423 4 {I|L} 1 7 10.596 0.0 0.0 1.1612 0.0 0.0 781.4186988916716 0.0 781.4186988916716 0.0 0.5072882037938875 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1612 + + 7 + 1 1.455 41704.1 1.0 6823 4718 11537 HBL1_DMSO_200M_050219_2,11543 HBL1_DMSO_200M_050219_2,11543,LPESGRVR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11544 62.218 41.0 1037600.0 25 0 91365.0 + 3432 CAHFLLPAI 9 73 492.7722150265973 983.5298771199948 2 492.7722656130791 MULTI CID FTMS 0 0 0 11537 770820.0625 0.7999471377182434 -2 0.1460990905761718 7 Unmodified _CAHFLLPAI_ ENSG00000174640|ENST00000310926|SLCO2A1;ENST00000462770.5_1_3:133661447-133748739:-|nuORF 20.871210003555333 0.2717241269066626 4 {I|L}PA{I|L} 4 5 22.529 0.0 0.0 2.2907 0.0 0.0 571.261522361525 0.0 571.261522361525 0.0 5.0552339309072 0.0 0.0 0 0.6331596456423735 0.0 0.0 0.0 + {I|L}PA{I|L} 2.2907 + + 51 1 1.455 40437.5 1.0 6824 4718 11537 HBL1_DMSO_200M_050219_2,11544 HBL1_DMSO_200M_050219_2,11544,CAHFLLPAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11545 62.22 58.0 554670.0 25 0 44154.0 + 12237 GQWYGPNTV 9 66 511.24155717130265 1020.4685614094052 2 511.2417480349541 MULTI CID FTMS 0 0 0 11537 479691.6875 1.0 0 0.0 8 Unmodified _GQWYGPNTV_ ENSG00000168397|ENST00000404914|ATG4B;ENST00000465399.5_1_2:242577129-242594780:+|nuORF;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;ENST00000493618.5_1_2:242577129-242598937:+|nuORF;ENST00000494465.5_1_2:242592964-242606150:+|nuORF;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;nc|ENSG00000168397|Q9Y4P1-3|ATG4B;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;nc|ENSG00000168397|Q9Y4P1-6|ATG4B 34.10243960390752 0.1078313939113124 4 TV 2 7 15.529 0.0 0.0 1.5217 0.0 0.0 802.3413316504194 0.0 802.3413316504194 0.0 -0.7251475338628666 -0.7251475338628666 0.0 0 0.0 0.0 0.3054621874040891 0.0 + TV 1.5217 + + 168 + 1 1.455 33289.0 1.0 6825 4718 11537 HBL1_DMSO_200M_050219_2,11545 HBL1_DMSO_200M_050219_2,11545,GQWYGPNTV True True GQWYGPNTV 62.21955 511.241748034954 4625388.0 11537.0 nc|ENSG00000168397|Q9Y4P1-6|ATG4B;;ENST00000493618.5_1_2:242577129-242598937:+|nuORF;;ENST00000465399.5_1_2:242577129-242594780:+|nuORF;;ENSG00000168397|ENST00000404914|ATG4B;;nc|ENSG00000168397|Q9Y4P1-2|ATG4B;;ENST00000494465.5_1_2:242592964-242606150:+|nuORF;;ENST00000482507.5_1_2:242592964-242610957:+|nuORF;;nc|ENSG00000168397|Q9Y4P1-4|ATG4B;;nc|ENSG00000168397|Q9Y4P1-3|ATG4B 4.257642904917399 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11546 62.222 137.0 800770.0 25 0 168180.0 + + -1 RLLDEEISRV 10 82 615.3461917744835 1228.6778306157669 2 615.3468505740166 MULTI CID FTMS 0 0 0 11537 401478.5 0.7593637316545736 -1 0.0863380432128906 9 Oxidation (M) _VIDLM(Oxidation (M))VKEGLP_ nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI;ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI 22.736283301280096 0.5583477779825423 4 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}GEE{[TV]|[{I|L}S]}RV 11 -1 + 74.661 0.0 0.0 6.0765 6.0765 79.589 0.0 0.0 0.0 3.976054209789723 12.729791153124353 3.976054209789723 3.976054209789723 0 1.1307196863200843 1.3979400086720375 1.2443929072036284 0.0 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}GEE{[TV]|[{I|L}S]}RV;[{I|L}V]D{I|L}GEE{[TV]|[{I|L}S]}RV;{NN|[MP]|[D{I|L}]|[EV]}VG{I|L}EE{[TV]|[{I|L}S]}RV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}VGEE{[TV]|[{I|L}S]}RV;[{I|L}V]DG{I|L}EE{[TV]|[{I|L}S]}RV;{NN|[MP]|[D{I|L}]|[EV]}V{I|L}WE{[TV]|[{I|L}S]}RV;[{I|L}V]EVGEE{[TV]|[{I|L}S]}RV;[{I|L}V]D{I|L}WE{[TV]|[{I|L}S]}RV;[{I|L}V]GD{I|L}EE{[TV]|[{I|L}S]}RV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}REE{[TV]|[{I|L}S]}RV 6.0765;5.7529;5.2304;5.0788;4.9068;4.8245;4.7552;4.5009;4.435;4.3309 -;-;-;-;-;-;-;-;-;- 987 1 1.455 86163.3 1.0 6826 4718 11537 HBL1_DMSO_200M_050219_2,11546 HBL1_DMSO_200M_050219_2,11546,VIDLMVKEGLP False False RLLDEEISRV 62.222344 615.346850574017 7669434.25 11537.0 nc|ENSG00000112531|Q96PU8-6|QKI;;nc|ENSG00000112531|Q96PU8-8|QKI;;nc|ENSG00000112531|Q96PU8-9|QKI;;ENSG00000112531|ENST00000361752|QKI;;nc|ENSG00000112531|Q96PU8-3|QKI;;nc|ENSG00000112531|Q96PU8-5|QKI 5.02595853805542 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11547 62.224 75.0 680300.0 25 0 38159.0 + 31249 RLTPKLMEV 9 90 543.8205716578298 1085.6265903824594 2 543.8213378787041 MULTI CID FTMS 0 0 0 11537 403045.71875 0.1672687667859341 -3 0.2254981994628906 10 Unmodified _RLTPKLMEV_ ENSG00000147677|ENST00000521861|EIF3H 23.80106514851385 0.2283505500606397 4 V{M(Oxidation (M))|F}M{I|L} 4 8 38.047 0.0 0.0 3.5047 0.0 0.0 0.0 592.3582131437381 592.3582131437381 27.20998857177409 0.0 0.0 0.0 0 0.6109243748081782 0.0 0.0 0.0 V{M(Oxidation (M))|F}M{I|L} 3.5047 - 161 + 1 1.455 44754.2 1.0 6827 4718 11537 HBL1_DMSO_200M_050219_2,11547 HBL1_DMSO_200M_050219_2,11547,RLTPKLMEV False True RLTPKLMEV 62.2241 543.821337878704 19511042.0 11537.0 ENSG00000147677|ENST00000521861|EIF3H 3.9905627568562823 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11548 62.226 80.0 595630.0 25 0 52346.0 + 27718 PLLNRMSV 8 77 465.2647565667504 928.5149602003008 2 465.2663452029228 MULTI CID FTMS 0 0 0 11537 384234.875 0.1907763157706912 -4 0.3050270080566406 11 Unmodified _PLLNRMSV_ REV__ENST00000420708.1_1_22:21496493-21496589:-|nuORF 13.50788311687929 0.7113601687236069 4 MP 2 -1 30.177 0.0 0.0 3.2501 0.0 0.0 0.0 697.4015596979124 697.4015596979124 6.791746928241128 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 MP 3.2501 - 69 + 1 1.455 44356.5 1.0 6828 4718 11537 HBL1_DMSO_200M_050219_2,11548 HBL1_DMSO_200M_050219_2,11548,PLLNRMSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11549 62.231 248.0 659540.0 25 0 122900.0 -1 0 152 340.2598216139572 678.5050902947144 2 340.2593871951103 MULTI CID FTMS 0 0 0 11537 308874.09375 0.5891310018045915 2 -0.1903877258300781 12 4 {I|L}{I|L} 2 -1 29.222 0.0 0.0 4.3068 0.0 0.0 0.0 449.31495141345647 449.31495141345647 14.13303128443836 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 {I|L}{I|L} 4.3068 - 35 + 1 1.455 132432.8 1.0 6829 4718 11537 HBL1_DMSO_200M_050219_2,11549 HBL1_DMSO_200M_050219_2,11549, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11550 62.233 135.0 445160.0 25 0 36789.0 27569 PLCFLPPI 8 105 450.2569626110224 898.4993722888448 2 450.2575866580009 MULTI CID FTMS 0 0 0 11537 248584.234375 0.3910994213276964 -4 0.3050270080566406 13 Unmodified _PLCFLPPI_ ENST00000493115.1_1_20:30451708-30457369:-|nuORF 11.114462752807354 0.7467182956244686 4 {I|L} 1 7 12.218 0.0 0.0 1.3599 0.0 0.0 767.4042317632574 0.0 767.4042317632574 0.0 1.249387366082999 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3599 + + 76 + 1 1.455 52796.0 1.0 6830 4718 11537 HBL1_DMSO_200M_050219_2,11550 HBL1_DMSO_200M_050219_2,11550,PLCFLPPI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11551 62.237 188.0 332220.0 25 0 25870.0 + 31075 RLLDEEISRV 10 76 410.5665861848334 1228.6779291547002 3 410.5663635134697 MULTI CID FTMS 0 0 0 11537 236680.453125 0.7134135537728163 -1 0.0863380432128906 14 Unmodified _RLLDEEISRV_ ENSG00000112531|ENST00000361752|QKI;nc|ENSG00000112531|Q96PU8-3|QKI;nc|ENSG00000112531|Q96PU8-5|QKI;nc|ENSG00000112531|Q96PU8-6|QKI;nc|ENSG00000112531|Q96PU8-8|QKI;nc|ENSG00000112531|Q96PU8-9|QKI 26.120906184454547 0.3818084954799617 4 [R{I|L}]{I|L}DEE 6 4 45.85 0.0 0.0 3.7317 0.0 0.0 0.0 470.2718763494849 470.2718763494849 27.51759495460933 0.0 0.0 0.0 0 0.8494850021680094 1.0457574905606752 0.0 0.3252574989159953 + [R{I|L}]{I|L}DEE 3.7317 + + 169 1 1.455 57989.3 1.0 6831 4718 11537 HBL1_DMSO_200M_050219_2,11551 HBL1_DMSO_200M_050219_2,11551,RLLDEEISRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11552 62.249 676.0 404650.0 25 0 15145.0 + + -1 NQVETLEKL 9 241 537.2904004915296 1072.566248049859 2 537.2958251833916 MULTI CID FTMS 0 0 0 11537 198190.734375 0.0837064845571315 -10 0.938678741455078 15 Oxidation (M) _GGQVRTIM(Oxidation (M))PV_ ENSG00000138095|ENST00000260665|LRPPRC 36.12702656103203 0.1984647928738587 4 {[QN]|[E{I|L}]|[KN]}VMK{I|L}VQN 9 -1 + 69.12 0.0 0.0 6.4444 6.4444 86.155 0.0 0.0 0.0 15.755532757449124 9.208187539523747 9.208187539523747 9.018637558036673 0 1.0 0.6777807052660807 1.5423849124922582 0.5649093276264391 {[QN]|[E{I|L}]|[KN]}VMK{I|L}VQN;{[QN]|[E{I|L}]|[KN]}VMKV{I|L}QN;{[QN]|[E{I|L}]|[KN]}VMK{I|L}V[AG]N;{[QN]|[E{I|L}]|[KN]}VMVK{I|L}QN;GGQVMK{I|L}VQN;{[QN]|[E{I|L}]|[KN]}VMKV{I|L}[AG]N;GGQVMVK{I|L}QN;GGQVMKV{I|L}QN;{[QN]|[E{I|L}]|[KN]}VMVK{I|L}[AG]N;GGQVMK{I|L}V[AG]N 6.4444;5.6036;5.5859;5.324;4.9754;4.745;4.6471;4.5306;4.4655;4.121 -;-;-;-;-;-;-;-;-;- 5416 1 1.455 208203.7 1.0 6832 4718 11537 HBL1_DMSO_200M_050219_2,11552 HBL1_DMSO_200M_050219_2,11552,GGQVRTIMPV False False NQVETLEKL 62.24865 537.295825183392 3689940.25 11537.0 ENSG00000138095|ENST00000260665|LRPPRC 5.0391130447387695 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11553 62.262 800.0 416280.0 25 0 49168.0 + 36416 SYVVGHVL 8 206 437.24501961472487 872.4754862962498 2 437.2447082400322 MULTI CID FTMS 0 0 0 11537 171536.171875 0.2350943978214154 -2 0.1460990905761718 16 Unmodified _SYVVGHVL_ ENSG00000163611|ENST00000295872|SPICE1;ENST00000496105.1_1_3:113169108-113212968:-|nuORF 34.18733598223924 0.3315367612694167 4 [HV]GVV{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 8 6 + 29.843 0.0 0.0 3.4205 3.4205 73.04 0.0 0.0 0.0 10.12923768275598 3.4948500216800937 3.4948500216800937 6.800150061873104 0 0.0 1.0969100130080565 0.0 0.0 [HV]GVV{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HV]GV{I|L}V{[{M(Oxidation (M))|F}C]|[YS]};{[{M(Oxidation (M))|F}C]|[YS]}VVGH{I|L}V;{[{M(Oxidation (M))|F}C]|[YS]}VVGHV{I|L};{[HG]|PP}VVV{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[{M(Oxidation (M))|F}C]|[YS]}VVG[{I|L}V]H;{[HG]|PP}VV{I|L}V{[{M(Oxidation (M))|F}C]|[YS]};[HV]K{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}V];{[HG]|PP}{[QN]|[E{I|L}]|[KN]}[{I|L}T]G{M(Oxidation (M))|F} 3.4205;2.6411;2.2595;2.218;2.0201;1.4051;1.2407;1.1726;0.15366 -;-;-;+;-;-;-;-;- + 469 1 1.455 256909.7 0.9100000262260436 6833 4718 11537 HBL1_DMSO_200M_050219_2,11553 HBL1_DMSO_200M_050219_2,11553,SYVVGHVL False True SYVVGHVL 62.262465 437.244708240032 5400354.0 11537.0 ENSG00000163611|ENST00000295872|SPICE1;;ENST00000496105.1_1_3:113169108-113212968:-|nuORF 6.032565116882324 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11554 62.276 800.0 317000.0 25 0 21753.0 + + 25747 LPPKDLRI 8 247 318.1909377671071 0 318.1909667849541 PEAK CID FTMS 0 0 0 11537 143452.71875 0.5174517158298854 14 -1.3091926574707031 17 Unmodified _NIPHFLVL_ ENSG00000110367|ENST00000534980|DDX6 4.3292370932331545 0.5842320662952245 4 D 1 -1 6.9897 0.0 0.0 1.1018 0.0 0.0 119.05958155508092 397.25886217964353 516.3184437347245 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 1.1018 - 5 + 1 1.455 200230.6 0.6800000071525574 6834 4718 11537 HBL1_DMSO_200M_050219_2,11554 HBL1_DMSO_200M_050219_2,11554,NIPHFLVL False False LPPKDLRI 62.276279 318.190966784954 646987.5 11537.0 ENSG00000110367|ENST00000534980|DDX6 1.5678918361663818 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11555 62.29 800.0 95684.0 25 0 5800.6 -1 0 84 758.6137640579306 3030.425950365322 4 758.3634521365166 MULTI CID FTMS 0 0 0 11537 65871.8046875 0.7722525681482753 2 -0.1903877258300781 18 4 GGVV 4 -1 12.907 0.0 0.0 0.42592 0.0 0.0 2447.09179616786 268.13056360416255 2715.222359772022 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GGVV 0.42592 - 506 + 1 1.455 65545.3 0.9800000190734864 6835 4718 11537 HBL1_DMSO_200M_050219_2,11555 HBL1_DMSO_200M_050219_2,11555, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11556 62.305 800.0 202310.0 25 0 17342.0 + 36585 TALPAKLV 8 151 406.76579711044326 811.5170412876865 2 406.7657653689384 MULTI CID FTMS 0 0 0 11537 119608.34375 0.9474717973088476 -1 0.0863380432128906 19 Unmodified _TALPAKLV_ REV__ENSG00000092067|ENST00000206513|CEBPE 23.1484247019978 0.5573009939494978 4 [TA]P{I|L}AKV{I|L} 8 -1 + 42.172 0.0 0.0 5.1966 5.1966 76.018 0.0 0.0 0.0 16.76554474077804 6.989700043360188 6.989700043360188 3.979400086720375 0 0.4247425010840047 2.0 0.0 0.0 [TA]P{I|L}AKV{I|L};[TA]{I|L}PAKV{I|L};[TA]P{I|L}AK{I|L}V;[TA]{I|L}PAK{I|L}V;[TA]P{I|L}A{I|L}KV;[TA]{I|L}PA{I|L}KV;[KA]{I|L}[{I|L}T]{I|L}[PG] 5.1966;4.7063;4.3353;3.845;3.8104;3.3201;1.3072 -;-;-;+;-;-;- + 238 + 1 1.455 128249.8 0.75 6836 4718 11537 HBL1_DMSO_200M_050219_2,11556 HBL1_DMSO_200M_050219_2,11556,TALPAKLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11557 62.319 800.0 81981.0 25 0 5752.2 + 45773 YYITNDTVQTY 11 116 690.8190431786885 1379.623533424177 2 690.8206054568291 MULTI CID FTMS 0 0 0 11537 100834.75 0.0085292560509569 10 -0.9878654479980468 20 Unmodified _YYITNDTVQTY_ ENSG00000144028|ENST00000323853|SNRNP200 45.69961567697781 0.1414455360291008 4 YYSVQET 7 7 40.767 0.0 0.0 2.955 0.0 0.0 0.0 506.22433843810194 506.22433843810194 15.2334196030246 0.0 0.0 0.0 0 0.0 2.0 0.5 0.2614393726401688 YYSVQET 2.955 - 1235 1 1.455 54393.1 0.7699999809265137 6837 4718 11537 HBL1_DMSO_200M_050219_2,11557 HBL1_DMSO_200M_050219_2,11557,YYITNDTVQTY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11559 62.324 2.6 22032000.0 25 0 2540500.0 + 3410 AYVHMVTHF 9 77 368.8482067050294 1103.5227907152882 3 368.8485595583916 MULTI CID FTMS 0 0 0 11558 18436506.0 0.6695614587235914 1 -0.0772972106933593 1 Unmodified _AYVHMVTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 26.88365393820708 0.1891292719743517 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}HDV 8 4 51.834 0.0 0.0 4.6971 0.0 0.0 0.0 132.0459383600219 132.0459383600219 23.756922347835783 0.0 0.0 0.0 0 0.25 2.0 0.5 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VH{M(Oxidation (M))|F}HDV 4.6971 - 225 + 1 1.451 49923.5 1.0 6838 4719 11558 HBL1_DMSO_200M_050219_2,11559 HBL1_DMSO_200M_050219_2,11559,AYVHMVTHF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11560 62.325 86.0 829460.0 25 0 128040.0 + -1 YYLCKMREE 9 56 646.2941509627079 1290.5737489922158 2 646.2948486208916 MULTI CID FTMS 0 0 0 11558 657797.625 0.2967989655765198 2 -0.1613121032714843 2 Carbamidomethyl (C) _YYLC(Carbamidomethyl (C))KMREE_ REV__ENSG00000121892|ENST00000303538|PDS5A;REV__nc|ENSG00000121892|Q29RF7-3|PDS5A 19.256988751693697 0.3154191944385105 4 YY{I|L}D 4 -1 56.186 0.0 0.0 4.3535 0.0 0.0 0.0 733.3159848143669 733.3159848143669 45.21652514092061 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 YY{I|L}D 4.3535 - 39 + 1 1.451 58467.2 1.0 6839 4719 11558 HBL1_DMSO_200M_050219_2,11560 HBL1_DMSO_200M_050219_2,11560,YYLCKMREE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11561 62.327 59.0 1046000.0 25 0 208760.0 + 45786 YYLFENTVEN 10 73 431.1984593672242 1290.5735487018726 3 431.1988403201103 MULTI CID FTMS 0 0 0 11558 900473.4375 0.3498995976133073 2 -0.1613121032714843 3 Unmodified _YYLFENTVEN_ REV__ENSG00000157423|ENST00000393567|HYDIN;REV__ENST00000378856.8_2_16:70845233-70899022:-|nuORF;REV__nc|ENSG00000157423|Q4G0P3-2|HYDIN 13.90604991867851 0.6142120002215601 4 YY{I|L}D 4 -1 43.94 0.0 0.0 3.4047 0.0 0.0 0.0 733.3189455405594 733.3189455405594 29.95567808259892 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 YY{I|L}D 3.4047 - 66 + 1 1.451 56550.5 1.0 6840 4719 11558 HBL1_DMSO_200M_050219_2,11561 HBL1_DMSO_200M_050219_2,11561,YYLFENTVEN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11562 62.328 49.0 1112700.0 25 0 97924.0 + 35850 SVLEDPVHAV 10 96 533.2834239391916 1064.5522949451831 2 533.2834350466728 MULTI CID FTMS 0 0 0 11558 726443.375 0.7733086330764375 2 -0.1613121032714843 4 Unmodified _SVLEDPVHAV_ ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1 24.020572477871973 0.4289996903560794 4 [VS]{I|L}ED 5 5 43.5 0.0 0.0 4.0862 0.0 0.0 0.0 518.2743013971311 518.2743013971311 15.524142386915653 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + [VS]{I|L}ED 4.0862 + + 656 + 1 1.451 47920.8 1.0 6841 4719 11558 HBL1_DMSO_200M_050219_2,11562 HBL1_DMSO_200M_050219_2,11562,SVLEDPVHAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11563 62.33 101.0 690740.0 25 0 74212.0 -1 TTKAVCKNTIS 11 81 611.8250054539315 1221.6354579746628 2 611.8256103396416 MULTI CID FTMS 0 0 0 11558 639904.5 0.3427859964950258 -2 0.1994285583496093 5 Carbamidomethyl (C) _TTKAVC(Carbamidomethyl (C))KNTIS_ nc|ENSG00000122257|Q7Z6E9-3|RBBP6 31.26834338654808 0.3580123756476716 4 [RV]{M(Oxidation (M))|F}GSQD{I|L}T{[TV]|[{I|L}S]} 11 -1 + 72.097 0.0 0.0 5.9017 5.9017 84.277 0.0 0.0 0.0 13.39327001161859 7.367585652254192 7.367585652254192 9.128498242810998 0 0.9247425010840048 0.958607314841775 0.4247425010840047 0.3054621874040891 [RV]{M(Oxidation (M))|F}GSQD{I|L}T{[TV]|[{I|L}S]};[RV]{M(Oxidation (M))|F}GS[AG]D{I|L}T{[TV]|[{I|L}S]};[YR]{I|L}DQSG[{I|L}A]TV;[YR]{I|L}DQS[Q{I|L}]TV;[RV][YQ]QD{I|L}T{[TV]|[{I|L}S]};[YR]{I|L}D[AG]SG[{I|L}A]TV;[YR]{I|L}D[AG]S[Q{I|L}]TV;[HV][VP]DQSG[{I|L}A]TV;[RV][YQ][AG]D{I|L}T{[TV]|[{I|L}S]};[HV][VP]DQS[Q{I|L}]TV 5.9017;5.1544;4.8053;4.5171;4.0749;4.0581;3.7669;3.464;3.3247;3.1728 -;-;-;-;-;-;-;-;-;- 330 1 1.451 57701.6 1.0 6842 4719 11558 HBL1_DMSO_200M_050219_2,11563 HBL1_DMSO_200M_050219_2,11563,TTKAVCKNTIS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11564 62.332 94.0 449120.0 25 0 32391.0 10363 FSLSPSTLLN 10 87 539.7928343895956 1077.571115845991 2 539.7921630740166 MULTI CID FTMS 0 0 0 11558 573379.3125 0.3189012097089567 2 -0.1613121032714843 6 Unmodified _FSLSPSTLLN_ ENSG00000100625|ENST00000216513|SIX4 16.149105407346934 0.5765757077271437 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}RD 6 7 47.44 0.0 0.0 4.4025 0.0 0.0 0.0 309.1935213678344 309.1935213678344 30.21697743678416 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}RD 4.4025 - 304 + 1 1.451 40016.5 1.0 6843 4719 11558 HBL1_DMSO_200M_050219_2,11564 HBL1_DMSO_200M_050219_2,11564,FSLSPSTLLN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11565 62.335 107.0 608580.0 25 0 42767.0 + 40482 VIPVNVPEA 9 108 469.271612248038 936.528671562876 2 469.2718994021416 MULTI CID FTMS 0 0 0 11558 509325.46875 0.4301687238297375 2 -0.1613121032714843 7 Unmodified _VIPVNVPEA_ ENSG00000136628|ENST00000366923|EPRS1 36.04419817259434 0.0971720506436186 4 [VP]NVV{I|L} 6 5 32.324 0.0 0.0 3.4515 0.0 0.0 0.0 312.117757826801 312.117757826801 12.830918867322296 0.0 0.0 0.0 0 0.4247425010840047 0.8239087409443188 0.0 0.3807196863200844 [VP]NVV{I|L} 3.4515 - 200 1 1.451 55578.4 1.0 6844 4719 11558 HBL1_DMSO_200M_050219_2,11565 HBL1_DMSO_200M_050219_2,11565,VIPVNVPEA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11566 62.337 107.0 1128800.0 25 0 108480.0 + 27857 PLRPGGDR 8 126 434.2430100092095 866.471467085219 2 434.2431518435478 MULTI CID FTMS 0 0 0 11558 489383.3125 0.4950754110968731 -4 0.3385887145996094 8 Unmodified _PLRPGGDR_ REV__ENSG00000135835|ENST00000367588|KIAA1614 9.347437153973935 0.7675937258251505 4 {[QS]|[NT]}S{I|L} 4 -1 34.492 0.0 0.0 3.9808 0.0 0.0 0.0 448.2386539350816 448.2386539350816 20.587898540627 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.4896518287104437 0.9049471895720984 {[QS]|[NT]}S{I|L} 3.9808 - 80 1 1.451 96848.4 1.0 6845 4719 11558 HBL1_DMSO_200M_050219_2,11566 HBL1_DMSO_200M_050219_2,11566,PLRPGGDR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11567 62.34 127.0 745050.0 25 0 146940.0 -1 0 95 561.313580933748 560.3063044671479 1 562.3141967654228 MULTI CID FTMS 0 0 0 11558 529776.1875 1.0 0 0.0 9 4 [TP]{I|L}[KC] 5 -1 + 32.345 0.0 0.0 5.7728 5.7728 86.211 0.0 0.0 0.0 10.417272168258211 4.515449934959719 4.515449934959719 10.417272168258211 0 0.0 1.3010299956639813 0.5866968715561641 0.0 [TP]{I|L}[KC];[KC]PT{I|L};[{I|L}T]P[KC];[WR]S{I|L};[WR]TV 5.7728;3.9136;0.62435;0.43407;0.28358 -;-;-;-;- 40 1 1.451 76962.2 1.0 6846 4719 11558 HBL1_DMSO_200M_050219_2,11567 HBL1_DMSO_200M_050219_2,11567, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11568 62.342 128.0 450690.0 25 0 41926.0 11551 GITDHIVQV 9 89 491.27289477794 980.53123662268 2 491.2725707888603 MULTI CID FTMS 0 0 0 11558 366104.5 1.0 0 0.0 10 Unmodified _GITDHIVQV_ nc|ENSG00000109180|Q9NX40-4|OCIAD1 36.04419817259434 0.0971720506436186 4 [H{I|L}]{[ES]|[DT]|[{I|L}C]}VAVQV 9 3 + 38.094 0.0 0.0 3.8851 3.8851 67.777 0.0 0.0 0.0 2.218487496163569 9.577570906191902 2.218487496163569 2.218487496163569 0 0.6237125054200234 1.0 0.3494850021680094 0.0 [H{I|L}]{[ES]|[DT]|[{I|L}C]}VAVQV;{[VA]|[{I|L}G]}G[NP][TP]VQV;[H{I|L}]{[ES]|[DT]|[{I|L}C]}G{I|L}VQV;{NN|[MP]|[D{I|L}]|[EV]}[HT]VAVQV;[H{I|L}]{[ES]|[DT]|[{I|L}C]}VG{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}[HT]G{I|L}VQV;{[VA]|[{I|L}G]}G[NP][PS]{I|L}QV;[H{I|L}]{[ES]|[DT]|[{I|L}C]}GV{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}[HT]VG{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}[HT]VAG[R{I|L}] 3.8851;3.6588;3.3985;3.3518;3.0421;2.8652;2.8158;2.5555;2.5088;2.4087 -;-;-;-;-;-;-;-;-;- 305 1 1.451 48634.6 1.0 6847 4719 11558 HBL1_DMSO_200M_050219_2,11568 HBL1_DMSO_200M_050219_2,11568,GITDHIVQV True True IDHTVAPQV 62.342231 491.27257078886 84038.2890625 11558.0 nc|ENSG00000115109|Q9HCM4-3|EPB41L5;;ENSG00000115109|ENST00000263713|EPB41L5;;nc|ENSG00000115109|Q9HCM4-4|EPB41L5 -0.3914105153332154 2.0 False 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11569 62.349 351.0 521020.0 25 0 58301.0 + 32144 RVPELLHRL 9 152 378.2384899584937 0 378.2366210818291 PEAK CID FTMS 0 0 0 11558 317483.0625 0.0830775292078887 -8 0.7091789245605469 11 Unmodified _RVPRRRRH_ nc|ENSG00000068878|Q14997-2|PSME4;ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-3|PSME4 10.073929032068715 0.5407296281113586 4 {I|L}G{I|L}C 4 8 16.938 0.0 0.0 2.2451 0.0 0.0 160.11214878679522 205.13875757388908 365.2509063606843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}G{I|L}C 2.2451 - 79 + 1 1.451 149570.2 1.0 6848 4719 11558 HBL1_DMSO_200M_050219_2,11569 HBL1_DMSO_200M_050219_2,11569,RVPRRRRH False False RVPELLHRL 62.348558 378.236621081829 5881513.0 11558.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4;;nc|ENSG00000068878|Q14997-3|PSME4 5.369826952616374 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11570 62.35 55.0 1003700.0 25 0 108520.0 + -1 AFICMLLM 8 81 515.7439666929092 1029.4733804526184 2 515.7446777224541 MULTI CID FTMS 0 0 0 11558 295305.53125 0.305996157245195 -4 0.3385887145996094 12 Carbamidomethyl (C),2 Oxidation (M) _AFIC(Carbamidomethyl (C))M(Oxidation (M))LLM(Oxidation (M))_ REV__ENSG00000184611|ENST00000332142|KCNH7;REV__nc|ENSG00000184611|Q9NS40-2|KCNH7 17.086550045450526 0.6584923310065985 4 QD{I|L}{[CP]|[EA]} 5 -1 24.693 0.0 0.0 2.3986 0.0 0.0 455.20121962715 0.0 455.20121962715 0.0 11.928527761275127 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 QD{I|L}{[CP]|[EA]} 2.3986 - 69 1 1.451 47869.9 1.0 6849 4719 11558 HBL1_DMSO_200M_050219_2,11570 HBL1_DMSO_200M_050219_2,11570,AFICMLLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11571 62.356 315.0 421070.0 25 0 39512.0 23207 LSSLSLPAAI 10 175 486.2924062901583 970.5702596471166 2 486.7933227419853 MULTI CID FTMS 0 0 0 11558 215869.703125 0.6472292464850551 4 -0.3604621887207031 13 Unmodified _LSSLSLPAAI_ ENST00000471941.5_1_10:45479206-45479773:+|nuORF;nc|ENSG00000107551|Q9H2L5-2|RASSF4 20.453626601364224 0.5043500229302764 4 {[VA]|[{I|L}G]}VT{I|L}{[CA]|SS}P 8 7 31.488 0.0 0.0 3.2443 0.0 0.0 0.0 213.1489078182196 213.1489078182196 7.020534381044506 0.0 0.0 0.0 0 0.0 2.0 0.2614393726401688 0.0 {[VA]|[{I|L}G]}VT{I|L}{[CA]|SS}P 3.2443 - 1814 1 1.451 100476.1 1.0 6850 4719 11558 HBL1_DMSO_200M_050219_2,11571 HBL1_DMSO_200M_050219_2,11571,LSSLSLPAAI False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 11572 62.369 760.0 179570.0 25 0 12091.0 -1 0 157 641.6259324225647 0 641.6263915896416 PEAK CID FTMS 0 0 0 11558 177413.28125 0.6696782710929974 -1 0.1130905151367187 14 4 AE{I|L}AH 5 -1 15.037 0.0 0.0 1.1736 0.0 0.0 528.851626792794 228.10007654361564 756.9517033364097 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AE{I|L}AH 1.1736 - 421 + 1 1.451 105317.0 1.0 6851 4719 11558 HBL1_DMSO_200M_050219_2,11572 HBL1_DMSO_200M_050219_2,11572, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11573 62.383 800.0 196380.0 25 0 11708.0 + 24082 LYFQSKENL 9 179 571.3007318096669 0 571.3009521365166 PEAK CID FTMS 0 0 0 11558 114121.296875 1.0 0 0.0 15 Unmodified _LYFQSKENL_ ENSG00000119326|ENST00000325551|CTNNAL1;nc|ENSG00000119326|Q9UBT7-2|CTNNAL1;nc|ENSG00000119326|Q9UBT7-3|CTNNAL1 43.85829265575387 0.0484669621479465 4 {M(Oxidation (M))|F}QS 3 6 26.145 0.0 0.0 2.2923 0.0 0.0 276.1506512781052 499.2541903131469 775.4048415912521 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.6989700043360187 0.8252574989159953 + {M(Oxidation (M))|F}QS 2.2923 + + 263 + 1 1.451 117475.2 0.9200000166893004 6852 4719 11558 HBL1_DMSO_200M_050219_2,11573 HBL1_DMSO_200M_050219_2,11573,LYFQSKENL True True LYFQSKENL 62.38272 571.300952136517 286165.6875 11558.0 nc|ENSG00000119326|Q9UBT7-2|CTNNAL1;;ENSG00000119326|ENST00000325551|CTNNAL1;;nc|ENSG00000119326|Q9UBT7-3|CTNNAL1 4.622500896453857 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11574 62.397 800.0 193190.0 25 0 12871.0 + -1 RQVEDLQATF 10 155 603.9677535467044 1808.8814312403133 3 603.9746581912041 MULTI CID FTMS 0 0 0 11558 110460.796875 0.0378697792188257 -11 1.0517692565917969 16 nc|ENSG00000105355|O60664-2|PLIN3;nc|ENSG00000105355|O60664-3|PLIN3;ENSG00000105355|ENST00000221957|PLIN3;nc|ENSG00000105355|O60664-4|PLIN3 4 {M(Oxidation (M))|F}{I|L}H{I|L}{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}QMN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q 15 -1 + 58.594 0.0 0.0 3.2392 3.2392 63.378 0.0 0.0 0.0 0.8412188239621088 0.8412188239621088 0.8412188239621088 0.8412188239621088 0 0.0 0.0 0.0 1.3556270500406935 {M(Oxidation (M))|F}{I|L}H{I|L}{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}QMN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;[H{I|L}][NP]{I|L}NMQ{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{I|L}H{I|L}E;{M(Oxidation (M))|F}{I|L}H{I|L}{M(Oxidation (M))|F}[NG]YEN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}M[WH]QMN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;{M(Oxidation (M))|F}{I|L}YS{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}QMN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;[H{I|L}][NP]{I|L}NEY[NG]{M(Oxidation (M))|F}{I|L}H{I|L}E;{M(Oxidation (M))|F}{I|L}H{I|L}{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}QV[W{M(Oxidation (M))|F}]Q{I|L}Q;[H{I|L}]H[W{M(Oxidation (M))|F}]VQ{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{I|L}H{I|L}E;{M(Oxidation (M))|F}{I|L}YN[YK]YEN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;[H{I|L}][NP]{I|L}NEY[YK]NY{I|L}E 3.2392;3.1927;3.1166;3.0922;3.0728;3.0701;2.772;2.7255;2.7215;2.675 -;-;-;-;-;-;-;-;-;- 12089 + 1 1.451 120028.0 0.8999999761581421 6853 4719 11558 HBL1_DMSO_200M_050219_2,11574 HBL1_DMSO_200M_050219_2,11574, False False RQVEDLQATF 62.396551 603.974658191204 2536184.5 11558.0 nc|ENSG00000105355|O60664-2|PLIN3;;nc|ENSG00000105355|O60664-3|PLIN3;;ENSG00000105355|ENST00000221957|PLIN3;;nc|ENSG00000105355|O60664-4|PLIN3 4.272709051767985 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11576 62.401 3.0 17138000.0 25 0 1517400.0 + + 27897 LPSPLKQTI 9 79 498.8081792005347 995.6018054678694 2 498.8087036013603 MULTI CID FTMS 0 0 0 11575 18708424.0 0.0706115927446323 -7 0.6146697998046875 1 Unmodified _PLSPLFLPL_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 44.40701690623563 0.0526327925666318 4 {I|L}PSP{I|L}[KQ]T{I|L} 9 -1 + 84.932 0.0 0.0 8.5307 8.5307 95.694 0.0 0.0 0.0 46.2101498947667 13.46787486224656 13.46787486224656 15.518951286913577 0 1.305462187404089 1.6989700043360187 0.4247425010840047 0.3807196863200844 {I|L}PSP{I|L}[KQ]T{I|L};[{I|L}P]SKQTP{I|L}{I|L};[PS]{I|L}KQTP{I|L}{I|L};[{I|L}P]KQTSP{I|L}{I|L};[{I|L}P]SKAASP{I|L}{I|L};[{I|L}P]KQSTP{I|L}{I|L};[{I|L}P]KSQTP{I|L}{I|L};[PS]{I|L}KAASP{I|L}{I|L};[{I|L}P]SK[AG]TP{I|L}{I|L};[PS]{I|L}K[AG]TP{I|L}{I|L} 8.5307;6.9719;6.861;6.361;6.2407;6.1674;6.1674;6.1298;6.0471;5.9361 -;-;-;-;-;-;-;-;-;- 464 + 1 1.451 46461.7 1.0 6854 4720 11575 HBL1_DMSO_200M_050219_2,11576 HBL1_DMSO_200M_050219_2,11576,PLSPLFLPL False False LPSPLKQTI 62.400809 498.80870360136 31113205760.0 11575.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 6.500657399495442 2.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11577 62.402 11.0 3450800.0 25 0 600840.0 + 35866 SVLKSIQEV 9 70 501.79564586639566 1001.5767387995912 2 501.7957031130791 MULTI CID FTMS 0 0 0 11575 4082839.25 0.6258498184879759 1 -0.084014892578125 2 Unmodified _SVLKSIQEV_ ENSG00000039123|ENST00000230640|MTREX 47.594388314883695 0.0456443387682827 4 [VS][{M(Oxidation (M))|F}V]{I|L}KEQ 8 5 49.174 0.0 0.0 4.9097 0.0 0.0 0.0 68.05140100650624 68.05140100650624 14.264771768807591 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.7742275032520141 [VS][{M(Oxidation (M))|F}V]{I|L}KEQ 4.9097 - 190 + 1 1.451 36376.0 1.0 6855 4720 11575 HBL1_DMSO_200M_050219_2,11577 HBL1_DMSO_200M_050219_2,11577,SVLKSIQEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11578 62.403 22.0 2488000.0 25 0 321630.0 + 43068 VYIEHRLMM 9 72 397.8718149815292 1190.5936155447876 3 397.8719970583916 MULTI CID FTMS 0 0 0 11575 2575543.5 0.9076415040481078 1 -0.084014892578125 3 Unmodified _VYIEHRLMM_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-2|MCM7 36.12702656103203 0.0967173616627612 4 VY{I|L}EH[R{I|L}]MM 9 0 + 69.847 0.0 0.0 5.8666 5.8666 76.618 0.0 0.0 0.0 53.19197157982357 8.204482088348115 8.204482088348115 2.887254899964361 0 0.2887254899964357 1.6989700043360187 0.3807196863200844 0.0 + + VY{I|L}EH[R{I|L}]MM;VY{I|L}EH{[WT]|[RM]}{I|L}M;VY{I|L}[RH]{[QN]|[E{I|L}]|[KN]}MM;[YV]{[WT]|[RM]}HE{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[Y{I|L}][MD][RH]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[RH]QQHE{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}[RH]Y{[ET]|[MV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}[RH]M[YV]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.8666;5.6241;4.2917;3.2328;2.4623;2.1046;0.98331;0.83541 +;-;-;-;-;-;-;- + 161 + 1 1.451 50819.2 1.0 6856 4720 11575 HBL1_DMSO_200M_050219_2,11578 HBL1_DMSO_200M_050219_2,11578,VYIEHRLMM True True VYIEHRLMM 62.403168 397.871997058392 25674188.5 11575.0 nc|ENSG00000166508|P33993-2|MCM7;;ENSG00000166508|ENST00000303887|MCM7 6.40721607208252 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11579 62.404 28.0 1691600.0 25 0 206320.0 -1 QAVGMWQVL 9 68 524.2695872806905 1046.524621628181 2 524.2704955935478 MULTI CID FTMS 0 0 0 11575 1745456.25 0.6592947258216107 2 -0.23046875 4 Oxidation (M) _QAVGM(Oxidation (M))WQVL_ ENSG00000091428|ENST00000397081|RAPGEF4;nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;nc|ENSG00000091428|Q8WZA2-5|RAPGEF4 15.847184025352805 0.4077185912009129 4 [QA]V[KG]{I|L}P{[MG]|[TS]}{M(Oxidation (M))|F} 10 -1 + 36.577 0.0 0.0 3.4951 3.4951 80.922 0.0 0.0 0.0 23.082137524177995 3.512649075511192 3.512649075511192 36.57698754585809 0 0.8494850021680094 0.7958800173440752 0.0 0.0 [QA]V[KG]{I|L}P{[MG]|[TS]}{M(Oxidation (M))|F} 3.4951 - 64 + 1 1.451 40196.6 1.0 6857 4720 11575 HBL1_DMSO_200M_050219_2,11579 HBL1_DMSO_200M_050219_2,11579,QAVGMWQVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11580 62.406 32.0 2248300.0 25 0 313750.0 + 3011 AVISKFWKS 9 77 355.8747668668881 1064.6024712008643 3 355.8745300173759 MULTI CID FTMS 0 0 0 11575 1670357.25 1.0 0 0.0 5 Unmodified _AVISKFWKS_ ENSG00000173163|ENST00000311832|COMMD1;ENST00000471704.1_1_2:62132813-62228123:+|nuORF;nc|ENSG00000173163|Q8N668-2|COMMD1 41.95555342248728 0.0647214845423414 4 {[VA]|[{I|L}G]}{I|L}SK{M(Oxidation (M))|F}WKS 9 0 + 81.252 0.0 0.0 7.6321 7.6321 88.212 0.0 0.0 0.0 50.507109678365325 13.845982038653588 13.845982038653588 6.817496819840656 0 0.3807196863200844 2.0 1.7302046884880935 0.0 + + {[VA]|[{I|L}G]}{I|L}SK{M(Oxidation (M))|F}WKS;{[VA]|[{I|L}G]}S{I|L}K{M(Oxidation (M))|F}WKS 7.6321;6.9918 +;- + 257 + 1 1.451 67070.2 1.0 6858 4720 11575 HBL1_DMSO_200M_050219_2,11580 HBL1_DMSO_200M_050219_2,11580,AVISKFWKS True True AVISKFWKS 62.405526 355.874530017376 17892254.0 11575.0 ENSG00000173163|ENST00000311832|COMMD1;;nc|ENSG00000173163|Q8N668-2|COMMD1;;ENST00000471704.1_1_2:62132813-62228123:+|nuORF 6.422525882720947 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11581 62.407 53.0 1215600.0 25 0 132770.0 + 3772 DAHIYLNHI 9 92 365.85799082968674 1094.5521430892602 3 365.8576537966728 MULTI CID FTMS 0 0 0 11575 1002195.1875 0.043085540879613 4 -0.426483154296875 6 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 31.26834338654808 0.1333407332142048 4 [H{I|L}]DAY{I|L}N{I|L}H 9 6 [H{I|L}]DAY + + 25.482 20.902 3.4879 2.3281 2.3281 44.89 0.0 0.0 0.0 0.0 10.56093158795967 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.6549471895720984 [H{I|L}]DAY{I|L}N{I|L}H 2.3281 - 140 + 1 1.451 59510.2 1.0 6859 4720 11575 HBL1_DMSO_200M_050219_2,11581 HBL1_DMSO_200M_050219_2,11581,DAHIYLNHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11582 62.408 56.0 1212700.0 25 0 131080.0 + 43069 VYIEHRLMM 9 68 596.3033493995486 1190.592145865897 2 596.3036376833916 MULTI CID FTMS 0 0 0 11575 956252.0625 1.0 0 0.0 7 Unmodified _VYIEHRLMM_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-2|MCM7 43.77239144664712 0.0547478964384323 4 VY{I|L}EHR{I|L}MM 9 0 + 72.357 0.0 0.0 6.0774 6.0774 72.647 0.0 0.0 0.0 53.86168767277148 10.1059905927697 10.1059905927697 0.2680249241196719 0 1.4731975075880328 2.0 0.0 0.0 + + VY{I|L}EHR{I|L}MM;VY{I|L}EHRM{I|L}M;VY{I|L}EH{[CA]|SS}{I|L}{I|L}M;VY{I|L}[RH]E{I|L}MM;[YV]MRHE{I|L}{I|L}M;[YV]{I|L}{[CA]|SS}HE{I|L}{I|L}M;[Y{I|L}]V{[CA]|SS}HE{I|L}{I|L}M;VYM[WR][PS][RP];[Y{I|L}][MD][RH]{I|L}{I|L}M;{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}{[QC]|[C(Carbamidomethyl (C))A]}E{I|L}{I|L}M 6.0774;6.0548;5.426;4.8602;4.7103;4.0815;3.6367;2.8869;2.7811;1.7594 +;-;-;-;-;-;-;-;-;- + 166 + 1 1.451 58642.3 1.0 6860 4720 11575 HBL1_DMSO_200M_050219_2,11582 HBL1_DMSO_200M_050219_2,11582,VYIEHRLMM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11583 62.41 64.0 1014300.0 25 0 105100.0 + 3012 AVISKFWKS 9 104 533.3083692560378 1064.6021855788756 2 533.3085815310478 MULTI CID FTMS 0 0 0 11575 787273.6875 1.0 0 0.0 8 Unmodified _AVISKFWKS_ ENSG00000173163|ENST00000311832|COMMD1;ENST00000471704.1_1_2:62132813-62228123:+|nuORF;nc|ENSG00000173163|Q8N668-2|COMMD1 45.739877483867886 0.0497104363764649 4 {[VA]|[{I|L}G]}{I|L}SK{M(Oxidation (M))|F}WKS 9 0 + 67.222 0.0 0.0 6.3143 6.3143 90.317 0.0 0.0 0.0 34.789464582210464 16.28254383016258 16.28254383016258 18.769184659718547 0 0.9749073637206092 2.0 1.2059771852360797 0.0 + + {[VA]|[{I|L}G]}{I|L}SK{M(Oxidation (M))|F}WKS;{[VA]|[{I|L}G]}{I|L}SK{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KKSKDTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KSKKDTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KKSKD{I|L}S;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KKSKDS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KSKKD{I|L}S;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KSKKDS{I|L};[WK]{M(Oxidation (M))|F}SK{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KE{I|L}WKS 6.3143;4.5512;2.6567;2.5393;2.4834;2.4834;2.366;2.366;2.004;1.9229 +;-;-;-;-;-;-;-;-;- + 640 + 1 1.451 57937.0 1.0 6861 4720 11575 HBL1_DMSO_200M_050219_2,11583 HBL1_DMSO_200M_050219_2,11583,AVISKFWKS True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11584 62.411 58.0 1001700.0 25 0 129850.0 + 3775 DAHIYLNHI 9 98 548.2829931927653 1094.5514334523305 2 548.2831909060478 MULTI CID FTMS 0 0 0 11575 769673.9375 0.0412318225896968 4 -0.426483154296875 9 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 69.33821966488729 0.021354776001734 4 {[DA]|[EG]}H{I|L}Y{I|L}NH{I|L} 9 0 + 93.655 0.0 0.0 8.5565 8.5565 94.469 0.0 0.0 0.0 48.58349385648225 9.973024840566469 9.973024840566469 11.35151878060192 0 3.0 1.0457574905606752 0.0 1.4604093769761874 + + {[DA]|[EG]}H{I|L}Y{I|L}NH{I|L};[H{I|L}]DAY{I|L}NH{I|L};[HA]D{I|L}Y{I|L}NH{I|L};[H{I|L}]DAY{I|L}GGH{I|L};[H{I|L}]DYA{I|L}NH{I|L};{[DA]|[EG]}H{I|L}Y{I|L}GGH{I|L};[HA]D{I|L}Y{I|L}GGH{I|L};{[DA]|[EG]}H{I|L}Y{I|L}[HQ]V;[H{I|L}]DYA{I|L}GGH{I|L};[H{I|L}]DY{I|L}ANH{I|L} 8.5565;7.5194;7.2077;6.6781;6.5126;6.381;6.3665;6.1494;5.6713;5.6432 +;-;-;-;-;-;-;-;-;- + 504 + 1 1.451 47955.1 1.0 6862 4720 11575 HBL1_DMSO_200M_050219_2,11584 HBL1_DMSO_200M_050219_2,11584,DAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11585 62.414 137.0 869760.0 25 0 74816.0 -1 AYVHMVTHF 9 112 374.1797164042758 0 374.1793701052666 PEAK CID FTMS 0 0 0 11575 756554.625 0.3830257303574577 2 -0.23046875 10 Oxidation (M) _AYVHM(Oxidation (M))VTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 23.78978130925829 0.1667157386347964 4 A 1 -1 6.9897 0.0 0.0 0.93652 0.0 0.0 540.2386462101157 132.0459383600219 672.2845845701376 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.93652 + + 60 + 1 1.451 103446.3 1.0 6863 4720 11575 HBL1_DMSO_200M_050219_2,11585 HBL1_DMSO_200M_050219_2,11585,AYVHMVTHF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11586 62.416 64.0 1094900.0 25 0 97424.0 41710 VPSLSIPGI 9 91 441.7683182352048 881.5220835372097 2 441.7684509158134 MULTI CID FTMS 0 0 0 11575 594378.5625 0.6669097494888809 16 -1.5435752868652344 11 Unmodified _VPSLSIPGI_ ENST00000335997.11_1_X:129200465-129200657:-|nuORF 18.13498045792455 0.3457906370836843 4 VP 2 7 41.766 0.0 0.0 4.7379 0.0 0.0 0.0 682.3811668677491 682.3811668677491 23.06933472159166 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + VP 4.7379 + + 122 + 1 1.451 57683.8 1.0 6864 4720 11575 HBL1_DMSO_200M_050219_2,11586 HBL1_DMSO_200M_050219_2,11586,VPSLSIPGI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11587 62.418 88.0 910050.0 25 0 123020.0 2450 AQVAMLNPGF 10 106 349.84908900802213 1046.5254376242665 3 349.8491393923759 MULTI CID FTMS 0 0 0 11575 579316.375 0.6977927267583465 2 -0.23046875 12 Unmodified _AQVAMLNPGF_ ENST00000602009.5_1_19:16512885-16513104:-|nuORF 10.823927491677226 0.6659270209832991 4 [{I|L}A]{M(Oxidation (M))|F} 3 7 22.676 0.0 0.0 2.1668 0.0 0.0 0.0 712.3436803823321 712.3436803823321 9.488474775526184 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]{M(Oxidation (M))|F} 2.1668 - 118 1 1.451 70188.4 1.0 6865 4720 11575 HBL1_DMSO_200M_050219_2,11587 HBL1_DMSO_200M_050219_2,11587,AQVAMLNPGF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11588 62.426 459.0 374500.0 25 0 31083.0 + 32077 RVLPPSALQSV 11 131 583.8482282329863 1165.6819035327726 2 583.8485595583916 MULTI CID FTMS 0 0 0 11575 464038.34375 0.8212178681091948 -2 0.1903877258300781 13 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 88.36371040165146 0.0014365852967226 4 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 79.651 0.0 0.0 6.833 6.833 86.09 0.0 0.0 0.0 13.966267973190526 45.45583695208046 13.966267973190526 6.989700043360188 0 1.610924374808178 0.721246399047171 1.274227503252014 0.2396518287104437 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}S{[HG]|PP}A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[RV]{I|L}S{[HG]|PP}A{I|L}[AG]SV;[VS][R{I|L}]{[HG]|PP}A{I|L}QSV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[RV]{I|L}S{[HG]|PP}RRSV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV;[RV]{I|L}P[PS]RRW;[{I|L}A]P[PS][RV]{I|L}QSV 6.833;6.2333;6.0499;5.4502;5.1457;4.2303;3.6547;3.4441;3.3258;3.2809 +;-;-;-;-;-;-;-;-;- + 476 1 1.451 128881.0 1.0 6866 4720 11575 HBL1_DMSO_200M_050219_2,11588 HBL1_DMSO_200M_050219_2,11588,RVLPPSALQSV True True RVLPPSALQSV 62.425761 583.848559558392 10466149.0 11575.0 nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;nc|ENSG00000178999|Q96GD4-2|AURKB 8.560493469238281 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11589 62.428 82.0 860740.0 25 0 64865.0 + 10879 GAFVHFHGV 9 110 485.7486124010658 969.4826718689316 2 486.2511474490166 MULTI CID FTMS 0 0 0 11575 392555.3125 0.1882763807587068 -2 0.1903877258300781 14 Unmodified _GAFVHFHGV_ ENSG00000006831|ENST00000357103|ADIPOR2 20.871210003555333 0.2717241269066626 4 {[TV]|[{I|L}S]}S 3 8 21.528 0.0 0.0 2.2205 0.0 0.0 0.0 679.3115347441848 679.3115347441848 2.3463688022820115 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.1861818737241735 0.0 {[TV]|[{I|L}S]}S 2.2205 - 671 1 1.451 58705.8 1.0 6867 4720 11575 HBL1_DMSO_200M_050219_2,11589 HBL1_DMSO_200M_050219_2,11589,GAFVHFHGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11590 62.431 182.0 392150.0 25 0 33638.0 + 38384 TQYHEVMNL 9 94 567.7669857288322 0 567.7669555544853 PEAK CID FTMS 0 0 0 11575 259897.140625 1.0 0 0.0 15 Unmodified _TQYHEVMNL_ ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10 28.49450938151212 0.124065572374239 4 NMVE 4 8 20.878 0.0 0.0 1.8419 0.0 0.0 131.0948102254393 526.2083834283811 657.3031936538205 0.0 0.0 0.0 0.0 0 0.6237125054200234 0.0 0.3494850021680094 0.0 NMVE 1.8419 - 104 + 1 1.451 59085.7 1.0 6868 4720 11575 HBL1_DMSO_200M_050219_2,11590 HBL1_DMSO_200M_050219_2,11590,TQYHEVMNL True True TQYHEVMNL 62.43114 567.766955554485 1950332.375 11575.0 ENSG00000086827|ENST00000200135|ZW10;;nc|ENSG00000086827|O43264-2|ZW10 6.026055018107097 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11591 62.436 282.0 340250.0 25 0 43366.0 + 14084 IAPPSHLI 8 109 424.2556894003791 846.4968258675582 2 424.2556030154228 MULTI CID FTMS 0 0 0 11575 240098.265625 0.8679972506594023 1 -0.084014892578125 16 Unmodified _IAPPSHLI_ ENSG00000073282|ENST00000264731|TP63;ENST00000460036.1_1_3:189507541-189590785:+|nuORF;nc|ENSG00000073282|Q9H3D4-10|TP63;nc|ENSG00000073282|Q9H3D4-11|TP63;nc|ENSG00000073282|Q9H3D4-12|TP63;nc|ENSG00000073282|Q9H3D4-2|TP63;nc|ENSG00000073282|Q9H3D4-3|TP63;nc|ENSG00000073282|Q9H3D4-4|TP63;nc|ENSG00000073282|Q9H3D4-5|TP63;nc|ENSG00000073282|Q9H3D4-6|TP63;nc|ENSG00000073282|Q9H3D4-7|TP63;nc|ENSG00000073282|Q9H3D4-8|TP63;nc|ENSG00000073282|Q9H3D4-9|TP63 34.18733598223924 0.3315367612694167 4 [{I|L}A]PPSH{I|L}{I|L} 8 0 + 38.977 0.0 0.0 4.6045 4.6045 84.79 0.0 0.0 0.0 26.758145307467032 6.217011013142908 6.217011013142908 38.976632803630594 0 0.3807196863200844 2.0 0.0 0.0 + + [{I|L}A]PPSH{I|L}{I|L} 4.6045 + + 95 + 1 1.451 77851.5 1.0 6869 4720 11575 HBL1_DMSO_200M_050219_2,11591 HBL1_DMSO_200M_050219_2,11591,IAPPSHLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11592 62.44 210.0 468140.0 25 0 22310.0 + 13296 HIVEALETDV 10 123 563.2925685188812 1124.5705841045624 2 563.2929565310478 MULTI CID FTMS 0 0 0 11575 214469.46875 0.2074856069624475 -2 0.1903877258300781 17 Unmodified _HIVEALETDV_ ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK 47.7319792270244 0.0934623409360514 4 [H{I|L}]VEA{I|L}ETDV 10 0 + 79.052 0.0 0.0 7.0296 7.0296 82.149 0.0 0.0 0.0 18.239087409443187 68.083362792012 18.239087409443187 3.252574989159953 0 1.0994850021680094 1.3979400086720375 0.8494850021680094 0.0 + + [H{I|L}]VEA{I|L}ETDV;[H{I|L}]VEA{I|L}TEDV;[H{I|L}]V[DV]VETDV;[DV]VVH{I|L}ETDV;[H{I|L}]V[DV]VTEDV;[TP]T{I|L}H{I|L}ETDV;[DV]VVH{I|L}TEDV;[TP]T{I|L}H{I|L}TEDV;{[QN]|[E{I|L}]|[KN]}G{I|L}H{I|L}ETDV;{[QN]|[E{I|L}]|[KN]}[HV]A{I|L}ETDV 7.0296;6.7403;5.2056;5.0084;4.9164;4.8723;4.7191;4.5831;4.5185;4.4572 +;-;-;-;-;-;-;-;-;- + 440 1 1.451 80904.0 1.0 6870 4720 11575 HBL1_DMSO_200M_050219_2,11592 HBL1_DMSO_200M_050219_2,11592,HIVEALETDV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11593 62.453 726.0 268320.0 25 0 16194.0 + -1 YAYMYEENS 9 170 593.2259572345041 1184.437361535808 2 593.2269164919853 MULTI CID FTMS 0 0 0 11575 176336.125 0.5617291134101776 2 -0.23046875 18 Oxidation (M) _YAYM(Oxidation (M))YEENS_ REV__ENSG00000143390|ENST00000452671|RFX5;REV__ENST00000469513.5_1_1:151316885-151317631:-|nuORF 12.531546534597751 0.4974689918368763 4 Y{M(Oxidation (M))|F} 2 -1 22.519 0.0 0.0 1.9012 0.0 0.0 0.0 871.3181631340897 871.3181631340897 6.549471895720984 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 1.9012 + + 515 + 1 1.451 144694.5 1.0 6871 4720 11575 HBL1_DMSO_200M_050219_2,11593 HBL1_DMSO_200M_050219_2,11593,YAYMYEENS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11594 62.467 800.0 616460.0 25 0 45090.0 + 10881 GAFVHFHGV 9 280 324.16819955373745 969.4827692614124 3 324.1680175662041 MULTI CID FTMS 0 0 0 11575 159581.4375 0.0941114179392745 -2 0.1903877258300781 19 Unmodified _GAFVHFHGV_ ENSG00000006831|ENST00000357103|ADIPOR2 45.7499826716795 0.0496882803020414 4 [AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}HGV 9 0 + 62.546 0.0 0.0 6.4515 6.4515 82.233 0.0 0.0 0.0 27.47425010840047 10.335230341436628 10.335230341436628 4.771212547196626 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + + [AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}HGV;[AG]V{M(Oxidation (M))|F}H{M(Oxidation (M))|F}HGV;[AG]{M(Oxidation (M))|F}VH{M(Oxidation (M))|F}V{[HG]|PP};[AG]V{M(Oxidation (M))|F}H{M(Oxidation (M))|F}V{[HG]|PP};[AG]{M(Oxidation (M))|F}VV[YT]DV;[AG]{M(Oxidation (M))|F}VV[YE]SV;[AG]V{M(Oxidation (M))|F}V[YT]DV;[AG]V{M(Oxidation (M))|F}V[YE]SV;[AG]{M(Oxidation (M))|F}VVQR{[HG]|PP};[AG][HK]HQHGV 6.4515;5.9594;5.2842;4.7921;4.3667;4.2563;4.235;4.1246;3.5381;3.0991 +;-;-;-;-;-;-;-;-;- + 1084 + 1 1.451 387959.9 0.699999988079071 6872 4720 11575 HBL1_DMSO_200M_050219_2,11594 HBL1_DMSO_200M_050219_2,11594,GAFVHFHGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11595 62.481 800.0 117900.0 25 0 18709.0 -1 0 60 1089.1190671024845 0 1089.118945300579 PEAK CID FTMS 0 0 0 11575 142510.46875 0.8339353471453482 -1 0.0772972106933593 20 4 G{M(Oxidation (M))|F} 2 -1 10.969 0.0 0.0 0.50404 0.0 0.0 566.4902571524316 1402.6486650305608 1969.138922182992 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 0.50404 - 38 + 1 1.451 80617.3 0.8399999737739563 6873 4720 11575 HBL1_DMSO_200M_050219_2,11595 HBL1_DMSO_200M_050219_2,11595, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11597 62.485 1.3 29432000.0 25 0 3425700.0 + 933 AFIDQSQSL 9 64 504.75338894443706 1007.492224955674 2 504.7538940310478 MULTI CID FTMS 0 0 0 11596 43528416.0 1.0 0 0.0 1 Unmodified _AFIDQSQSL_ ENSG00000167325|ENST00000300738|RRM1 28.486842064014134 0.1687311288560894 4 {[TV]|[{I|L}S]}QS[{M(Oxidation (M))|F}V]QS{I|L} 9 5 {[TV]|[{I|L}S]}QS[{M(Oxidation (M))|F}V]Q + + 19.508 18.741 2.3741 1.9363 1.9363 44.532 0.0 0.0 0.0 0.0 -3.725084128651393 -3.725084128651393 0.0 0 0.0 0.0 0.3054621874040891 0.0 {[TV]|[{I|L}S]}QS[{M(Oxidation (M))|F}V]QS{I|L} 1.9363 - 134 + 1 1.451 37632.8 1.0 6874 4721 11596 HBL1_DMSO_200M_050219_2,11597 HBL1_DMSO_200M_050219_2,11597,AFIDQSQSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11598 62.486 10.0 4122000.0 25 0 297060.0 + 24891 MPNPSLAQV 9 79 478.7472355152565 955.479918097313 2 478.7475463747978 MULTI CID FTMS 0 0 0 11596 4605765.5 0.8512119900218682 1 -0.146453857421875 2 Unmodified _MPNPSLAQV_ ENSG00000152240|ENST00000282058|HAUS1;nc|ENSG00000152240|Q96CS2-2|HAUS1 29.081581746732265 0.1611639662936252 4 VP[C(Carbamidomethyl (C))S]{I|L}AQV 8 3 26.534 0.0 0.0 2.777 0.0 0.0 83.03793532539218 0.0 83.03793532539218 0.0 11.049340831250731 0.0 0.0 0 0.5682503180159344 0.0 0.9247425010840048 0.0 VP[C(Carbamidomethyl (C))S]{I|L}AQV 2.777 - 168 1 1.451 37277.4 1.0 6875 4721 11596 HBL1_DMSO_200M_050219_2,11598 HBL1_DMSO_200M_050219_2,11598,MPNPSLAQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11599 62.487 30.0 1564400.0 25 0 182720.0 + 3413 AYVHMVTHF 9 72 552.7680460743543 1103.5215392155085 2 552.7684814333916 MULTI CID FTMS 0 0 0 11596 1610423.875 0.115478548012162 3 -0.34246826171875 3 Unmodified _AYVHMVTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 85.35673624503755 0.0162188719545379 4 AYVHMVTH{M(Oxidation (M))|F} 9 0 + 101.68 0.0 0.0 9.2142 9.2142 83.821 0.0 0.0 0.0 36.47817481888637 2.108533653148939 2.108533653148939 2.108533653148939 0 2.0356668758921828 2.0 0.0 0.0 + + AYVHMVTH{M(Oxidation (M))|F};AYVHMVT{M(Oxidation (M))|F}H;AYVHY[PA]H{M(Oxidation (M))|F};AYVHY[PA]{M(Oxidation (M))|F}H;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VHMVTH{M(Oxidation (M))|F};AYVH{[{M(Oxidation (M))|F}H]|[RQ]}[PS]{M(Oxidation (M))|F};AYVHY[HV]{[ES]|[DT]|[{I|L}C]};AYVH{[{M(Oxidation (M))|F}H]|[RQ]}{[HG]|PP}H;A[KC][PA]MVTH{M(Oxidation (M))|F};A[KC]TVMHV{[ES]|[DT]|[{I|L}C]} 9.2142;9.0231;6.2406;6.0496;5.5892;4.8178;4.6299;4.6267;4.3636;4.2167 +;-;-;-;+;-;-;-;-;- + 352 + 1 1.451 42971.9 1.0 6876 4721 11596 HBL1_DMSO_200M_050219_2,11599 HBL1_DMSO_200M_050219_2,11599,AYVHMVTHF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11600 62.489 59.0 1221400.0 25 0 484970.0 -1 LVMALMPVGL 10 85 530.300680394052 1058.586807854904 2 530.3005859255791 MULTI CID FTMS 0 0 0 11596 1100581.625 0.732907067883271 -1 0.084014892578125 4 Oxidation (M) _LVM(Oxidation (M))ALMPVGL_ ENSG00000117834|ENST00000438567|SLC5A9;nc|ENSG00000117834|Q2M3M2-2|SLC5A9;nc|ENSG00000117834|Q2M3M2-3|SLC5A9 12.531546534597751 0.6372748319968624 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR]E 5 -1 20.202 0.0 0.0 1.9084 0.0 0.0 0.0 340.22264704851654 340.22264704851654 7.437602450080938 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR]E 1.9084 - 70 1 1.451 63309.0 1.0 6877 4721 11596 HBL1_DMSO_200M_050219_2,11600 HBL1_DMSO_200M_050219_2,11600,LVMALMPVGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11601 62.49 46.0 1642600.0 25 0 203090.0 + 33440 SIAPRMMSV 9 111 496.2576303291076 990.5007077250152 2 496.2578613162041 MULTI CID FTMS 0 0 0 11596 932417.125 1.0 0 0.0 5 Unmodified _SIAPRMMSV_ ENSG00000047315|ENST00000314595|POLR2B 28.49450938151212 0.1686335738423394 4 {[TV]|[{I|L}S]}A[WE]{[TV]|[{I|L}S]}SV 9 4 + 49.366 0.0 0.0 4.9839 4.9839 77.918 0.0 0.0 0.0 20.737862141609185 34.761628243150646 20.737862141609185 6.355129762210915 0 1.5774509799928715 2.0 0.0 0.0 {[TV]|[{I|L}S]}A[WE]{[TV]|[{I|L}S]}SV;{[TV]|[{I|L}S]}A[WE]{[WT]|[RM]}V;{NN|[MP]|[D{I|L}]|[EV]}Q{[ET]|[MV]}{[TV]|[{I|L}S]}SV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}D{[CA]|SS}V[PG]V;{NN|[MP]|[D{I|L}]|[EV]}Q[YT]V[PG]V;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[C(Carbamidomethyl (C))E]|[WC]}V[PG]V;{NN|[MP]|[D{I|L}]|[EV]}Q{[ET]|[MV]}{[WT]|[RM]}V;{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}[R{M(Oxidation (M))|F}][RP];{[MS]|[{M(Oxidation (M))|F}A]}{I|L}D{[CA]|SS}[RP]V;{NN|[MP]|[D{I|L}]|[EV]}Q[YT][RP]V 4.9839;4.3423;2.6325;2.5814;2.5476;2.2258;1.9909;1.9112;1.5375;1.5092 -;-;-;-;-;-;-;-;-;- 265 1 1.451 64057.8 1.0 6878 4721 11596 HBL1_DMSO_200M_050219_2,11601 HBL1_DMSO_200M_050219_2,11601,SIAPRMMSV False True SIAPRMMSV 62.489903 496.257861316204 6716406.0 11596.0 ENSG00000047315|ENST00000314595|POLR2B 5.370606581370036 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11602 62.5 559.0 330170.0 25 0 18197.0 + 24702 MNRENEFYNKF 11 128 746.3352823006574 1490.6560116681146 2 746.3361083865166 MULTI CID FTMS 0 0 0 11596 350180.46875 0.6162200896842048 -1 0.084014892578125 6 Unmodified _MNRENEFYNKF_ REV__ENSG00000117477|ENST00000367806|CCDC181;REV__nc|ENSG00000117477|Q5TID7-2|CCDC181;REV__nc|ENSG00000117477|Q5TID7-3|CCDC181 22.736283301280096 0.5583477779825423 4 NMPN{I|L}NADQ[RD]G{M(Oxidation (M))|F} 13 -1 + 115.4 0.0 0.0 7.7418 7.7418 81.617 0.0 0.0 0.0 24.301246920434394 2.052796481831649 2.052796481831649 2.052796481831649 0 1.035666875892183 1.5228787452803376 0.7302046884880937 2.124803706770636 NMPN{I|L}NADQ[RD]G{M(Oxidation (M))|F};NMPN{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};NMPN{I|L}NWQ[RD]G{M(Oxidation (M))|F};NMPN{I|L}NWQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};NMPN{I|L}GGADQ[RD]G{M(Oxidation (M))|F};NMPN{I|L}NAD[AG][RD]G{M(Oxidation (M))|F};NMPGG{I|L}NADQ[RD]G{M(Oxidation (M))|F};NMPGG{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};NMPN{I|L}NAD[AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};NMPN{I|L}GGADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]} 7.7418;7.6041;7.2962;7.1585;7.1332;7.1332;7.1332;6.9955;6.9955;6.9955 -;-;-;-;-;-;-;-;-;- 3147 + 1 1.451 131145.8 1.0 6879 4721 11596 HBL1_DMSO_200M_050219_2,11602 HBL1_DMSO_200M_050219_2,11602,MNRENEFYNKF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11603 62.504 224.0 721880.0 25 0 59648.0 -1 0 119 428.2416385910248 427.2343621244248 1 428.2413818240166 MULTI CID FTMS 0 0 0 11596 276836.65625 0.6828515389990368 1 -0.146453857421875 7 4 {[VA]|[{I|L}G]}AV 4 -1 12.14 0.0 0.0 2.8415 0.0 0.0 0.0 83.99937021727308 83.99937021727308 1.958951690258747 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 {[VA]|[{I|L}G]}AV 2.8415 - 45 1 1.451 129408.2 1.0 6880 4721 11596 HBL1_DMSO_200M_050219_2,11603 HBL1_DMSO_200M_050219_2,11603, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11604 62.514 600.0 411160.0 25 0 48026.0 + 43741 YDSESTTEDML 11 153 645.7544942379817 1289.4944355427633 2 645.7556030154228 MULTI CID FTMS 0 0 0 11596 267304.4375 1.0 0 0.0 8 Unmodified _YDSESTTEDML_ REV__ENSG00000136147|ENST00000378319|PHF11;REV__ENST00000488605.1_1_13:50096192-50101394:+|nuORF;REV__nc|ENSG00000136147|Q9UIL8-2|PHF11 13.042465956692816 0.7638483625850725 4 [YV]DPS[DP]Y 8 -1 60.512 0.0 0.0 4.6927 0.0 0.0 0.0 350.08545068019686 350.08545068019686 13.840688559432408 0.0 0.0 0.0 0 1.7689301784845295 2.0 0.9802046884880936 0.0 [YV]DPS[DP]Y 4.6927 - 3464 + 1 1.451 178951.7 1.0 6881 4721 11596 HBL1_DMSO_200M_050219_2,11604 HBL1_DMSO_200M_050219_2,11604,YDSESTTEDML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11605 62.527 705.0 285520.0 25 0 43549.0 + 41613 VPPNGLVV 8 92 794.4768059565276 793.4695294899276 1 794.4776489138603 MULTI CID FTMS 0 0 0 11596 215827.859375 0.3369807628221423 -11 0.9722518920898438 9 Unmodified _VPPNGLVV_ ENSG00000120705|ENST00000360541|ETF1;nc|ENSG00000120705|P62495-2|ETF1 53.57557251787612 0.1224291679108181 4 [VP]PNAVVV 8 2 + 67.899 0.0 0.0 8.5572 8.5572 87.606 0.0 0.0 0.0 13.948565749036064 14.904630595263413 13.948565749036064 4.771212547196626 0 0.4247425010840047 1.6989700043360187 0.0 0.6307196863200843 [VP]PNAVVV;[VP]PNG{I|L}VV;[VP]{[QG]|[NA]}VPVV;[VP]{[QG]|[NA]}PVVV;[{I|L}P][NG]VPVV;[{I|L}P][NG]PVVV;[VP]PNGV{I|L}V;[VP]PGGAVVV;[VP]PGGG{I|L}VV;[NP]G{I|L}VPVV 8.5572;7.9559;7.8748;7.8692;6.7993;6.7937;6.69;6.595;5.9937;5.6001 -;+;-;-;-;-;-;-;-;- + 440 1 1.451 140641.4 1.0 6882 4721 11596 HBL1_DMSO_200M_050219_2,11605 HBL1_DMSO_200M_050219_2,11605,VPPNGLVV True True VPPNGLVV 62.526719 794.47764891386 13225204.0 11596.0 nc|ENSG00000120705|P62495-2|ETF1;;ENSG00000120705|ENST00000360541|ETF1 5.749699751536052 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11606 62.531 229.0 330310.0 25 0 38385.0 + 4469 DAYALNHTL 9 135 509.2535253747258 1016.4924978162516 2 509.2520324587822 MULTI CID FTMS 0 0 0 11596 208061.109375 0.0006858104529395 50 -4.723163604736328 10 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 56.17704186161178 0.0281986971544335 4 {[DA]|[EG]}YA{I|L}NHT{I|L} 9 0 {[DA]|[EG]}Y + + 29.773 22.676 6.4951 2.929 2.929 45.778 0.0 0.0 0.0 0.0 6.128283404015029 0.0 0.0 0 0.5 0.0 1.285666875892183 0.3252574989159953 + + {[DA]|[EG]}YA{I|L}NHT{I|L} 2.929 + + 815 + 1 1.451 61714.1 1.0 6883 4721 11596 HBL1_DMSO_200M_050219_2,11606 HBL1_DMSO_200M_050219_2,11606,DAYALNHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11607 62.543 698.0 215540.0 25 0 22100.0 -1 YMVYMFHY 8 169 585.2433405095412 1168.4721280858823 2 585.7444335818291 MULTI CID FTMS 0 0 0 11596 188100.8125 1.0 0 0.0 11 Oxidation (M) _YM(Oxidation (M))VYMFHY_ ENST00000509325.1_1_12:7719006-7719195:+|nuORF 11.114462752807354 0.7467182956244686 4 SY 2 -1 14.974 0.0 0.0 1.2815 0.0 0.0 900.3681500345587 0.0 900.3681500345587 0.0 0.7968087117210096 0.0 0.0 0 0.0 0.0 0.25 0.0 SY 1.2815 - 1733 + 1 1.451 113842.6 1.0 6884 4721 11596 HBL1_DMSO_200M_050219_2,11607 HBL1_DMSO_200M_050219_2,11607,YMVYMFHY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11608 62.557 800.0 276480.0 25 0 20264.0 8922 FALEMQMY 8 249 344.8234315944313 1031.448465383494 3 344.8236572146416 MULTI CID FTMS 0 0 0 11596 145116.453125 0.8397420480207395 -1 0.084014892578125 12 Unmodified _FALEMQMY_ ENST00000480273.5_1_20:62318929-62319157:+|nuORF 9.347437153973935 0.7675937258251505 4 {I|L} 1 7 13.099 0.0 0.0 1.27 0.0 0.0 900.3533401166957 0.0 900.3533401166957 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.27 + + 203 + 1 1.451 174564.6 0.7099999785423279 6885 4721 11596 HBL1_DMSO_200M_050219_2,11608 HBL1_DMSO_200M_050219_2,11608,FALEMQMY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11609 62.572 800.0 138710.0 25 0 31766.0 -1 0 89 1027.4724855168552 2052.9304181005105 2 1027.474291980267 MULTI CID FTMS 0 0 0 11596 127666.9375 1.0 0 0.0 13 4 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DQSQS 8 -1 52.428 0.0 0.0 2.5538 0.0 0.0 0.0 1173.505220363675 1173.505220363675 22.795000083553205 0.0 0.0 0.0 0 0.0 0.0 1.1307196863200843 0.5994850021680094 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DQSQS 2.5538 - 1487 1 1.451 77513.5 0.9100000262260436 6886 4721 11596 HBL1_DMSO_200M_050219_2,11609 HBL1_DMSO_200M_050219_2,11609, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11610 62.586 800.0 277330.0 25 0 17666.0 + 35968 SVMNSVVSL 9 181 475.75834986679456 0 476.2441894412041 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _SVQFRNSI_ ENST00000531186.5_1_11:32605433-32610279:+|nuORF;ENSG00000149100|ENST00000531120|EIF3M 18.13498045792455 0.4501116112875982 4 V 1 7 7.7866 0.0 0.0 0.82007 0.0 0.0 334.2327509037079 513.1767061822874 847.4094570859952 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + V 0.82007 + + 160 + 1 1.451 170473.3 0.9100000262260436 6887 4721 11596 HBL1_DMSO_200M_050219_2,11610 HBL1_DMSO_200M_050219_2,11610,SVQFRNSI False False SVMNSVVSL 62.586086 476.244189441204 777832.0 11596.0 ENST00000531186.5_1_11:32605433-32610279:+|nuORF;;ENSG00000149100|ENST00000531120|EIF3M 2.5645050207773843 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11611 62.599 771.0 96706.0 25 0 4105.8 + 8520 ETEEWLSRYH 10 120 675.3096191287041 0 675.3096191287041 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _ETEEWLSRYH_ REV__ENST00000295491.8_1_4:84380924-84382168:+|nuORF 6.2057823575117 0.3961065659209838 4 DW{I|L} 3 -1 11.427 0.0 0.0 0.8473 0.0 0.0 763.3523182361206 168.0419863336547 931.3943045697752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DW{I|L} 0.8473 - 126 + 1 1.451 57553.6 1.0 6888 4721 11596 HBL1_DMSO_200M_050219_2,11611 HBL1_DMSO_200M_050219_2,11611,ETEEWLSRYH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11612 62.614 798.0 304250.0 25 0 113860.0 18651 LAGSSSVT 8 108 721.3757870299372 720.3685105633372 1 722.3079101443291 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _LAGSSSVT_ chr2:73927052-73943172|15|16.33|0.71|4.52|+|0|DGUOK,None|1 6.354104778181461 0.7857632046190106 4 [YV]D 3 7 14.27 0.0 0.0 1.9809 0.0 0.0 0.0 340.18616943400417 340.18616943400417 -1.1362189075153122 0.0 -1.1362189075153122 0.0 0 0.0 1.2218487496163564 0.0 0.0 [YV]D 1.9809 - 320 1 1.451 177043.1 1.0 6889 4721 11596 HBL1_DMSO_200M_050219_2,11612 HBL1_DMSO_200M_050219_2,11612,LAGSSSVT False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 11613 62.627 730.0 86543.0 25 0 5903.5 -1 EIICCRGDQV 10 126 625.2883763195946 1248.562199705989 2 625.2902709841728 MULTI CID FTMS 0 0 0 11596 106750.484375 0.1919687031741229 2 -0.1991500854492187 17 2 Carbamidomethyl (C) _EIIC(Carbamidomethyl (C))C(Carbamidomethyl (C))RGDQV_ ENSG00000101624|ENST00000262127|CEP76;ENST00000590143.5_1_18:12662154-12700964:-|nuORF;nc|ENSG00000101624|Q8TAP6-2|CEP76 10.823927491677226 0.6659270209832991 4 {NN|[MP]|[D{I|L}]|[EV]}K 3 -1 15.686 0.0 0.0 1.2564 0.0 0.0 0.0 889.3262432453047 889.3262432453047 2.5874185669681555 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}K 1.2564 - 243 1 1.451 56974.3 1.0 6890 4721 11596 HBL1_DMSO_200M_050219_2,11613 HBL1_DMSO_200M_050219_2,11613,EIICCRGDQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11615 62.631 22.0 1554000.0 25 0 120080.0 + 39892 VFMHVSTAY 9 71 527.7546519488697 1053.4947509645392 2 527.7547485232353 MULTI CID FTMS 0 0 0 11614 383492.3125 0.0609371821986766 2 -0.196014404296875 1 Unmodified _VFMHVSTAY_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 14.581692164780916 0.4419739649577144 4 VVYAY 5 5 28.416 0.0 0.0 2.6973 0.0 0.0 440.1883067280142 0.0 440.1883067280142 0.0 16.633638461478437 0.0 0.0 0 0.0 0.0 0.0 0.0 VVYAY 2.6973 - 40 + 1 1.434 33317.3 1.0 6891 4722 11614 HBL1_DMSO_200M_050219_2,11615 HBL1_DMSO_200M_050219_2,11615,VFMHVSTAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11616 62.633 45.0 1141300.0 25 0 117380.0 + 3411 AYVHMVTHF 9 86 368.8482067050294 1103.5227907152882 3 368.8480407595634 MULTI CID FTMS 0 0 0 11614 997705.125 0.0362338123541957 4 -0.3701896667480469 2 Unmodified _AYVHMVTHF_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 21.74664581756881 0.2544899275067181 4 [HV]MTH 5 4 21.911 0.0 0.0 1.9856 0.0 0.0 0.0 495.2213130143695 495.2213130143695 5.536049848239344 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.3494850021680094 0.0 [HV]MTH 1.9856 - 97 1 1.434 48212.1 1.0 6892 4722 11614 HBL1_DMSO_200M_050219_2,11616 HBL1_DMSO_200M_050219_2,11616,AYVHMVTHF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11617 62.634 13.0 3307100.0 25 0 374190.0 + 5025 DGWDRTPQI 9 84 544.261965075484 1086.509377217768 2 544.2622558474541 MULTI CID FTMS 0 0 0 11614 4126410.5 0.5141540913299019 -2 0.23046875 3 Unmodified _DGWDRTPQI_ ENSG00000100330|ENST00000401950|MTMR3;ENSG00000108389|ENST00000682306|MTMR4;nc|ENSG00000100330|Q13615-2|MTMR3;nc|ENSG00000100330|Q13615-3|MTMR3;nc|ENSG00000108389|Q9NYA4|MTMR4 66.45667989310934 0.0225072657982126 4 {[QD]|[EN]|[WG]|[KD]|[RS]}DDRT[QP]{I|L} 9 2 + 44.63 0.0 0.0 4.1077 4.1077 71.292 0.0 0.0 0.0 3.679767852945943 6.476949551052371 3.679767852945943 3.679767852945943 0 1.6989700043360187 1.0 0.7059771852360797 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}DDRT[QP]{I|L};[DG]WDRT[QP]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DWW[QP]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DDRGR[EP];{[QD]|[EN]|[WG]|[KD]|[RS]}DDRG[VG][EP];[QP]WWD{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[QP]WWW{[RE]|[WV]};{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}[QP]M[EP] 4.1077;3.769;3.2185;2.5586;1.7111;1.078;0.78092;0.41972 -;+;-;-;-;-;-;- + 133 1 1.434 41590.6 1.0 6893 4722 11614 HBL1_DMSO_200M_050219_2,11617 HBL1_DMSO_200M_050219_2,11617,DGWDRTPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11618 62.635 20.0 2468200.0 25 0 203410.0 10710 FWFYYATL 8 86 555.7669558359238 1109.5193587386475 2 555.7679321169853 MULTI CID FTMS 0 0 0 11614 2219347.0 0.1406433945740923 -2 0.23046875 4 Unmodified _FWFYYATL_ ENSG00000171451|ENST00000310045|DSEL 14.581692164780916 0.6954967302934248 4 T{I|L} 2 6 30.261 0.0 0.0 2.7274 0.0 0.0 877.3764429445054 0.0 877.3764429445054 0.0 1.0521190280943635 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 + T{I|L} 2.7274 + + 141 + 1 1.434 46319.0 1.0 6894 4722 11614 HBL1_DMSO_200M_050219_2,11618 HBL1_DMSO_200M_050219_2,11618,FWFYYATL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11619 62.636 27.0 1591500.0 25 0 215190.0 + -1 MPMPLLLV 8 61 465.2647565667504 928.5149602003008 2 465.2655517458916 MULTI CID FTMS 0 0 0 11614 2014059.625 1.0 0 0.0 5 Oxidation (M) _MPM(Oxidation (M))PLLLV_ REV__ENSG00000186881|ENST00000334726|OR13F1 17.086550045450526 0.6584923310065985 4 MP{I|L}{M(Oxidation (M))|F} 4 -1 37.423 0.0 0.0 4.0304 0.0 0.0 0.0 437.23456751041255 437.23456751041255 3.4948500216800937 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 MP{I|L}{M(Oxidation (M))|F} 4.0304 - 46 + 1 1.434 40805.5 1.0 6895 4722 11614 HBL1_DMSO_200M_050219_2,11619 HBL1_DMSO_200M_050219_2,11619,MPMPLLLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11620 62.637 30.0 1438500.0 25 0 189060.0 + -1 MVADKFTEL 9 65 535.2653592460215 1068.5161655588429 2 535.2656738162041 MULTI CID FTMS 0 0 0 11614 1652455.875 0.7143351107892014 -1 0.146453857421875 6 Oxidation (M) _M(Oxidation (M))VADKFTEL_ ENSG00000105568|ENST00000322088|PPP2R1A 20.453626601364224 0.2830276176381075 4 NA{NN|[MP]|[D{I|L}]|[EV]} 4 -1 22.619 0.0 0.0 2.1169 0.0 0.0 637.3489857404312 0.0 637.3489857404312 0.0 3.6793155570823854 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 NA{NN|[MP]|[D{I|L}]|[EV]} 2.1169 - 77 1 1.434 39885.0 1.0 6896 4722 11614 HBL1_DMSO_200M_050219_2,11620 HBL1_DMSO_200M_050219_2,11620,MVADKFTEL False False MVADKFTEL 62.637227 535.265673816204 18840216.0 11614.0 ENSG00000105568|ENST00000322088|PPP2R1A 2.709606329600016 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11621 62.639 63.0 720580.0 25 0 92626.0 + -1 RVFGSQNLTTV 11 57 611.8250054539315 1221.6354579746628 2 611.8251220583916 MULTI CID FTMS 0 0 0 11614 1031344.625 0.5524738379092718 1 -0.0526962280273437 7 Carbamidomethyl (C) _TTKAVC(Carbamidomethyl (C))KNTIS_ ENSG00000149428|ENST00000617285|HYOU1;ENST00000543287.5_1_11:118919950-118926831:-|nuORF;nc|ENSG00000149428|Q9Y4L1-2|HYOU1 24.99096001346401 0.505407273373304 4 [RV]{M(Oxidation (M))|F}[SG]QD{I|L}TTV 11 -1 + 49.2 0.0 0.0 4.0274 4.0274 72.147 0.0 0.0 0.0 3.309710622901214 30.78396073130168 3.309710622901214 4.503187623076954 0 1.048455006504028 0.0 0.4247425010840047 0.4247425010840047 [RV]{M(Oxidation (M))|F}[SG]QD{I|L}TTV;[YR]{I|L}DQ[SG][{I|L}A]TV;[RV][YQ]QD{I|L}TTV;[RV]{M(Oxidation (M))|F}[SG][AG]D{I|L}TTV;[RV][YQ][AG]D{I|L}TTV;[RV]{M(Oxidation (M))|F}[SG]Q{[RE]|[WV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.0274;3.6588;3.4891;3.2802;2.739;0.15424 -;-;-;-;-;- 118 1 1.434 43561.7 1.0 6897 4722 11614 HBL1_DMSO_200M_050219_2,11621 HBL1_DMSO_200M_050219_2,11621,TTKAVCKNTIS False False RVFGSQNLTTV 62.638797 611.825122058392 0.0 11614.0 ENSG00000149428|ENST00000617285|HYOU1;;ENST00000543287.5_1_11:118919950-118926831:-|nuORF;;nc|ENSG00000149428|Q9Y4L1-2|HYOU1 3.733942679439982 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11622 62.64 53.0 1659100.0 25 0 208420.0 37988 TNLHRLGG 8 110 434.2430100092095 866.471467085219 2 434.2430602908134 MULTI CID FTMS 0 0 0 11614 978548.125 0.9899297807839522 -1 0.146453857421875 8 Unmodified _TNLHRLGG_ ENSG00000087086|ENST00000331825|FTL 12.531546534597751 0.7257836412119636 4 {[QS]|[NT]}S{I|L} 4 5 37.814 0.0 0.0 4.3641 0.0 0.0 0.0 448.241675175316 448.241675175316 26.70462065533477 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.5629529932484498 0.9163865622122672 {[QS]|[NT]}S{I|L} 4.3641 - 52 1 1.434 74588.5 1.0 6898 4722 11614 HBL1_DMSO_200M_050219_2,11622 HBL1_DMSO_200M_050219_2,11622,TNLHRLGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11623 62.642 77.0 1135800.0 25 0 116990.0 + 41623 VPPPLAKAI 9 89 453.2945236289187 904.5744943246374 2 453.2946655154228 MULTI CID FTMS 0 0 0 11614 897119.5 0.6611403335845135 5 -0.4701347351074219 9 Unmodified _VPPPLAKAI_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;ENST00000588913.5_1_19:10244345-10246231:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 48.345845343767074 0.0439967357579942 4 VPPP{I|L}AKA{I|L} 9 0 + 65.281 0.0 0.0 7.2168 7.2168 92.781 0.0 0.0 0.0 42.88540967689293 8.440899702813027 8.440899702813027 14.535247228595267 0 0.7302046884880937 2.0 0.0 0.0 + + VPPP{I|L}AKA{I|L};VP{I|L}{[HG]|PP}AKA{I|L};V[YK]{I|L}AKA{I|L} 7.2168;5.6099;1.7423 +;-;- + 245 + 1 1.434 71567.8 1.0 6899 4722 11614 HBL1_DMSO_200M_050219_2,11623 HBL1_DMSO_200M_050219_2,11623,VPPPLAKAI True True VPPPLAKAI 62.641927 453.294665515423 128382344.0 11614.0 ENST00000586588.5_1_19:10244345-10254710:-|nuORF;;ENST00000588913.5_1_19:10244345-10246231:-|nuORF;;ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 4.603124698003133 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11624 62.643 47.0 980870.0 25 0 156740.0 -1 LILCGLQP 8 83 457.26420380462406 912.513854676048 2 457.2643920779228 MULTI CID FTMS 0 0 0 11614 851056.3125 0.6796973131170705 -2 0.23046875 10 Carbamidomethyl (C) _LILC(Carbamidomethyl (C))GLQP_ ENST00000404792.5_2_11:71711556-71712334:+|nuORF 5.760428011301431 0.7893668129297577 4 V 1 -1 9.9148 0.0 0.0 1.0865 0.0 0.0 795.4340950098357 0.0 795.4340950098357 0.0 9.20149578566244 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0865 - 22 + 1 1.434 41876.7 1.0 6900 4722 11614 HBL1_DMSO_200M_050219_2,11624 HBL1_DMSO_200M_050219_2,11624,LILCGLQP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11625 62.644 30.0 1705600.0 25 0 171980.0 + 982 AFQYSTNSL 9 88 515.7439666929092 1029.4733804526184 2 515.7444946169853 MULTI CID FTMS 0 0 0 11614 841264.25 0.8717196275942124 -1 0.146453857421875 11 Unmodified _AFQYSTNSL_ REV__ENSG00000005844|ENST00000356798|ITGAL;REV__nc|ENSG00000005844|P20701-2|ITGAL 11.640296217721598 0.521594087909532 4 RD{I|L}{[CP]|[EA]} 5 -1 22.575 0.0 0.0 2.1929 0.0 0.0 427.1680775373063 0.0 427.1680775373063 0.0 2.9093938099548886 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 RD{I|L}{[CP]|[EA]} 2.1929 - 103 1 1.434 48056.8 1.0 6901 4722 11614 HBL1_DMSO_200M_050219_2,11625 HBL1_DMSO_200M_050219_2,11625,AFQYSTNSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11626 62.647 112.0 710230.0 25 0 90893.0 + 16520 KAQDEIPAL 9 93 492.7722150265973 983.5298771199948 2 492.7719909548759 MULTI CID FTMS 0 0 0 11614 690930.125 0.7170383890430435 2 -0.196014404296875 12 Unmodified _KAQDEIPAL_ ENSG00000013275|ENST00000157812|PSMC4;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;ENST00000596386.1_1_19:40477100-40485896:+|nuORF;ENST00000601697.5_1_19:40477100-40486546:+|nuORF;nc|ENSG00000013275|P43686-2|PSMC4 53.832793166522166 0.0319663582346103 4 [KA]QDE{I|L}PA{I|L} 9 0 + 49.547 0.0 0.0 5.0377 5.0377 68.941 0.0 0.0 0.0 0.5435766232259311 13.798793729568857 0.5435766232259311 0.5435766232259311 0 1.524227503252014 0.0 1.0228787452803376 0.3494850021680094 + + [KA]QDE{I|L}PA{I|L};[QA]KDE{I|L}PA{I|L};[PA][WM]AKPA{I|L};[PA]HHNKPA{I|L};[QA]DKE{I|L}PA{I|L};[KA][AG]DE{I|L}PA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HN]AKPA{I|L};{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EKPA{I|L};{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}EKPA{I|L};[VS]QQE{I|L}PA{I|L} 5.0377;4.9824;4.7616;4.5825;4.4235;4.1014;4.0513;4.0049;3.9834;3.9436 +;-;-;-;-;-;-;-;-;- + 578 1 1.434 64015.9 1.0 6902 4722 11614 HBL1_DMSO_200M_050219_2,11626 HBL1_DMSO_200M_050219_2,11626,KAQDEIPAL True True KAQDEIPAL 62.64671 492.771990954876 34776736.0 11614.0 ENSG00000013275|ENST00000157812|PSMC4;;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;;ENST00000596386.1_1_19:40477100-40485896:+|nuORF;;nc|ENSG00000013275|P43686-2|PSMC4;;ENST00000601697.5_1_19:40477100-40486546:+|nuORF 5.484567642211914 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11627 62.649 117.0 474710.0 25 0 39035.0 + -1 YMIDPSGVSY 10 85 574.2522709111895 1146.489988889179 2 574.2524291872978 MULTI CID FTMS 0 0 0 11614 603327.5625 0.1176977174747862 4 -0.3701896667480469 13 Oxidation (M) _YM(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 32.30548876998284 0.2428506522065767 4 {[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}[C(Carbamidomethyl (C))K]YSY 9 -1 {[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}[C(Carbamidomethyl (C))K]Y + + 28.711 9.9654 1.1345 2.5043 2.5043 45.101 0.0 0.0 0.0 0.0 11.598337768503267 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}[C(Carbamidomethyl (C))K]YSY 2.5043 - 237 + 1 1.434 47939.6 1.0 6903 4722 11614 HBL1_DMSO_200M_050219_2,11627 HBL1_DMSO_200M_050219_2,11627,YMIDPSGVSY False False YMIDPSGVSY 62.64916 574.252429187298 162172620.0 11614.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 6.131147384643555 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11628 62.652 153.0 687650.0 25 0 112810.0 15199 IPERTLYRQSL 11 80 688.3902087074724 1374.7658644817448 2 688.3915283083916 MULTI CID FTMS 0 0 0 11614 540561.0625 0.2540093883576283 -4 0.4208564758300781 14 Unmodified _IPERTLYRQSL_ ENSG00000123094|ENST00000689635|RASSF8;nc|ENSG00000123094|Q8NHQ8-2|RASSF8 7.477065608646677 0.839870652676021 4 [{I|L}P]SP{I|L}KQT{I|L} 9 6 41.168 0.0 0.0 2.9946 0.0 0.0 0.0 394.1525924370806 394.1525924370806 8.046991712379345 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.7302046884880937 0.0 [{I|L}P]SP{I|L}KQT{I|L} 2.9946 - 765 1 1.434 81221.4 1.0 6904 4722 11614 HBL1_DMSO_200M_050219_2,11628 HBL1_DMSO_200M_050219_2,11628,IPERTLYRQSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11629 62.656 209.0 541620.0 25 0 118710.0 11407 GGQGLSKSQ 9 85 431.2253956915876 0 430.8884765505791 PEAK CID FTMS 0 0 0 11614 116149.15625 0.8998541793722038 -1 0.146453857421875 15 Unmodified _GGQGLSKSQ_ ENST00000412203.1_1_3:189838785-189861131:+|nuORF 16.942295170755138 0.2326366549411506 4 N 1 9 3.9659 0.0 0.0 0.46092 0.0 0.0 430.2196379634501 313.1526888483032 743.3723268117533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 N 0.46092 - 11 + 1 1.434 97202.0 1.0 6905 4722 11614 HBL1_DMSO_200M_050219_2,11629 HBL1_DMSO_200M_050219_2,11629,GGQGLSKSQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11630 62.659 151.0 614940.0 25 0 40719.0 + 24905 MPNTRPPII 9 114 519.791170775148 1037.567788617096 2 519.7928344607353 MULTI CID FTMS 0 0 0 11614 472346.125 0.0703199378720075 12 -1.0636253356933594 16 Unmodified _MPNTRPPII_ ENSG00000084774|ENST00000264705|CAD 34.40172386719151 0.1061884637610825 4 MPNTR 5 4 66.498 0.0 0.0 6.409 0.0 0.0 0.0 435.26191126041255 435.26191126041255 38.06933472159166 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.4247425010840047 + MPNTR 6.409 + + 164 + 1 1.434 75772.2 1.0 6906 4722 11614 HBL1_DMSO_200M_050219_2,11630 HBL1_DMSO_200M_050219_2,11630,MPNTRPPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11631 62.667 434.0 647310.0 25 0 90801.0 + -1 LHCVTPSSIPS 11 144 599.2983386050089 1196.5821242768177 2 599.2986938357353 MULTI CID FTMS 0 0 0 11614 450609.28125 0.3018102085903623 -2 0.23046875 17 Carbamidomethyl (C) _LHC(Carbamidomethyl (C))VTPSSIPS_ REV__ENST00000603606.1_1_14:64061078-64061531:-|nuORF 24.020572477871973 0.5281922720044371 4 {I|L}AYS{M(Oxidation (M))|F}SRK{I|L} 9 -1 82.748 0.0 0.0 6.9153 0.0 0.0 112.9598133239627 0.0 112.9598133239627 0.0 33.177541900173715 0.0 0.0 0 2.231295889838706 0.0 1.0941876774005248 1.055462187404089 {I|L}AYS{M(Oxidation (M))|F}SRK{I|L} 6.9153 - 1691 + 1 1.434 208315.1 1.0 6907 4722 11614 HBL1_DMSO_200M_050219_2,11631 HBL1_DMSO_200M_050219_2,11631,LHCVTPSSIPS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11632 62.669 115.0 543910.0 25 0 67367.0 + 14427 IFPEGRPVV 9 76 507.29155646900193 1012.568560004804 2 507.2914306521416 MULTI CID FTMS 0 0 0 11614 407703.21875 0.8087830101363646 -3 0.3077659606933594 18 Unmodified _IFPEGRPVV_ ENSG00000269858|ENST00000303961|EGLN2;ENST00000593477.1_1_19:41312411-41313222:+|nuORF;nc|ENSG00000269858|Q96KS0-2|EGLN2 14.838274106304384 0.4350285940865338 4 EP{[QN]|[E{I|L}]|[KN]} 4 7 20.005 0.0 0.0 1.9757 0.0 0.0 526.323810146535 0.0 526.323810146535 0.0 6.025684359364405 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 EP{[QN]|[E{I|L}]|[KN]} 1.9757 - 60 1 1.434 53197.8 1.0 6908 4722 11614 HBL1_DMSO_200M_050219_2,11632 HBL1_DMSO_200M_050219_2,11632,IFPEGRPVV False True IFPEGRPVV 62.669324 507.291430652142 20597958.0 11614.0 ENSG00000269858|ENST00000303961|EGLN2;;ENST00000593477.1_1_19:41312411-41313222:+|nuORF;;nc|ENSG00000269858|Q96KS0-2|EGLN2 5.924065748850505 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11633 62.671 78.0 736610.0 25 0 61148.0 + + -1 SQTDLVSRL 9 98 509.7767483771956 1017.5389438211912 2 509.7797729372978 MULTI CID FTMS 0 0 0 11614 367953.78125 0.3053090252345128 -2 0.23046875 19 Oxidation (M) _LGM(Oxidation (M))LKMPNV_ ENSG00000175274|ENST00000525680|TP53I11 13.50788311687929 0.4710407108020397 4 {[QS]|[NT]}TD{I|L}V 6 -1 35.864 0.0 0.0 3.5245 0.0 0.0 0.0 371.20566736392817 371.20566736392817 17.016675202793714 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 0.0 {[QS]|[NT]}TD{I|L}V 3.5245 - 203 + 1 1.434 51422.3 1.0 6909 4722 11614 HBL1_DMSO_200M_050219_2,11633 HBL1_DMSO_200M_050219_2,11633,LGMLKMPNV False False SQTDLVSRL 62.671112 509.779772937298 6357748.0 11614.0 ENSG00000175274|ENST00000525680|TP53I11 4.147617816925049 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11634 62.68 491.0 607810.0 25 0 42171.0 32311 RYIANTVEL 9 189 539.7974460115875 1077.5803390899748 2 539.7972289919853 MULTI CID FTMS 0 0 0 11614 364380.375 0.1741908535913112 -2 0.23046875 20 Unmodified _RYIANTVEL_ ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2 32.78568957990786 0.1150597335874693 4 [KG]YA{I|L}EGVE{I|L} 10 6 + 51.916 0.0 0.0 4.8179 4.8179 68.448 0.0 0.0 0.0 5.415317615370363 16.53212513775344 5.415317615370363 0.7795501485934864 0 0.3252574989159953 0.0 0.4247425010840047 0.3270087243081599 [KG]YA{I|L}EGVE{I|L};[KG]YA{I|L}WVE{I|L};[KG]YA[TP]TVE{I|L};[KG]YAE{I|L}GVE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[Y{I|L}]NTVE{I|L};[VP][HV]ANTVE{I|L};[{I|L}A][YR]NTVE{I|L};{[QN]|[E{I|L}]|[KN]}[KQ]YGVE{I|L};{[QN]|[E{I|L}]|[KN]}A[KG]YGVE{I|L};[KG]YA{I|L}ERE{I|L} 4.8179;4.7455;4.5645;4.4486;4.3153;4.3081;4.2905;4.0437;3.9278;3.8175 -;-;-;-;-;-;-;-;-;- 6696 1 1.434 233905.2 1.0 6910 4722 11614 HBL1_DMSO_200M_050219_2,11634 HBL1_DMSO_200M_050219_2,11634,RYIANTVEL True True HFYGKAIEL 62.679793 539.797228991985 24267476.0 11614.0 ENSG00000104969|ENST00000221566|SGTA 4.410786072413127 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11636 62.684 0.84 59635000.0 25 0 5173100.0 + 22353 LPSPLKQTI 9 76 498.8081792005347 995.6018054678694 2 498.8087646365166 MULTI CID FTMS 0 0 0 11635 72409560.0 0.2732969041934273 -4 0.3604621887207031 1 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 53.40400417844725 0.0329064971918313 4 {I|L}PSP{I|L}KQT{I|L} 9 0 + 77.705 0.0 0.0 7.8048 7.8048 91.479 0.0 0.0 0.0 41.3566032266867 13.46787486224656 13.46787486224656 9.208187539523747 0 1.5682503180159344 1.5228787452803376 0.7742275032520141 0.0 + + {I|L}PSP{I|L}KQT{I|L};{I|L}PSP{I|L}K[AG]T{I|L};[VG][R{I|L}]P{I|L}[WR] 7.8048;6.8799;1.4792 +;-;- + 569 + 1 1.434 46027.4 1.0 6911 4723 11635 HBL1_DMSO_200M_050219_2,11636 HBL1_DMSO_200M_050219_2,11636,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11637 62.685 11.0 4122400.0 25 0 276720.0 + 38307 TQIDHYVGI 9 71 523.2686460466331 1044.522739160066 2 523.2692748904228 MULTI CID FTMS 0 0 0 11635 4700885.0 1.0 0 0.0 2 Unmodified _TQIDHYVGI_ ENSG00000133318|ENST00000377819|RTN3;nc|ENSG00000133318|O95197-2|RTN3;nc|ENSG00000133318|O95197-3|RTN3;nc|ENSG00000133318|O95197-4|RTN3;nc|ENSG00000133318|O95197-7|RTN3 36.506200033944 0.094635877243972 4 [QT][RD]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VG{I|L} 9 3 + 43.126 0.0 0.0 4.1288 4.1288 67.698 0.0 0.0 0.0 2.9710624853235146 14.973024840566469 2.9710624853235146 1.7609125905568137 0 1.1549471895720984 1.0969100130080565 0.3494850021680094 0.0 [QT][RD]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VG{I|L};[QT]EE[RN]VG{I|L};[HD]{I|L}YV[QT]G{I|L};[HD]{I|L}Y[QT]VG{I|L};[QT][RD]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{I|L};[HD]Y{I|L}[QT]VG{I|L};[HD]Y{I|L}V[QT]G{I|L};[HD]{I|L}[QT]YVG{I|L};[NP][PG]YV[QT]G{I|L};[NP][PG]Y[QT]VG{I|L} 4.1288;3.9602;3.8444;3.8444;3.672;3.5562;3.5562;3.5562;3.3273;3.3273 -;-;-;-;-;-;-;-;-;- 261 1 1.434 43244.5 1.0 6912 4723 11635 HBL1_DMSO_200M_050219_2,11637 HBL1_DMSO_200M_050219_2,11637,TQIDHYVGI True True TQIDHYVGI 62.685155 523.269274890423 65064260.0 11635.0 nc|ENSG00000133318|O95197-3|RTN3;;nc|ENSG00000133318|O95197-7|RTN3;;ENSG00000133318|ENST00000377819|RTN3;;nc|ENSG00000133318|O95197-4|RTN3;;nc|ENSG00000133318|O95197-2|RTN3 5.664390881856282 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11638 62.686 35.0 1910500.0 25 0 349980.0 20692 LLRPGHGPI 9 84 480.29262761102257 958.5707022888452 2 480.2935974001884 MULTI CID FTMS 0 0 0 11635 1375647.75 0.2922940193887727 -1 0.0526962280273437 3 Unmodified _LLRPGHGPI_ ENSG00000144331|ENST00000410066|ZNF385B;nc|ENSG00000144331|Q569K4-2|ZNF385B;nc|ENSG00000144331|Q569K4-3|ZNF385B;nc|ENSG00000144331|Q569K4|ZNF385B 24.67388899826682 0.2172451872415813 4 [{I|L}T]DTKG[{I|L}V]{I|L} 9 7 + 34.213 0.0 0.0 3.5692 3.5692 63.35 0.0 0.0 0.0 0.4575749056067479 4.541492120621044 0.4575749056067479 0.4575749056067479 0 0.4247425010840047 1.154901959985743 0.2887254899964357 0.0 [{I|L}T]DTKG[{I|L}V]{I|L};{[TV]|[{I|L}S]}ETKG[{I|L}V]{I|L};{NN|[MP]|[D{I|L}]|[EV]}TTKG[{I|L}V]{I|L};{NN|[MP]|[D{I|L}]|[EV]}TTK[R{I|L}]{I|L} 3.5692;3.5214;3.241;3.0629 -;-;-;- 278 1 1.434 59963.2 1.0 6913 4723 11635 HBL1_DMSO_200M_050219_2,11638 HBL1_DMSO_200M_050219_2,11638,LLRPGHGPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11639 62.688 24.0 1888000.0 25 0 144090.0 + + 7486 SQPPVFKV 8 77 451.2717425544446 900.5289321756892 2 451.2716857790947 MULTI CID FTMS 0 0 0 11635 945392.3125 0.3870245871506301 -1 0.0526962280273437 4 Unmodified _EGVLLGKVS_ ENSG00000130726|ENST00000253024|TRIM28;nc|ENSG00000130726|Q13263-2|TRIM28 19.256988751693697 0.3154191944385105 4 {[SA]|[TG]}GKPKKW 8 -1 + 37.685 0.0 0.0 4.1847 4.1847 72.05 0.0 0.0 0.0 4.007758316664997 8.25473103164149 4.007758316664997 4.007758316664997 0 0.0 0.619788758288394 0.1923877696554315 0.0 {[SA]|[TG]}GKPKKW;{[QS]|[NT]}KPKKW;[VS]A[RV]{I|L}AW;{[CT]|[{M(Oxidation (M))|F}G]}KK[HV]SV;{[SA]|[TG]}V[RV]{I|L}AW;{[CT]|[{M(Oxidation (M))|F}G]}KK{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RV]{I|L}AW;{[SA]|[TG]}{I|L}[Q{I|L}]{I|L}A[VS];[KS][RH]V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.1847;3.7397;3.3139;3.2681;3.1054;2.5514;2.3558;1.7426;0.9422 -;-;-;-;-;-;-;-;- 155 1 1.434 42094.4 1.0 6914 4723 11635 HBL1_DMSO_200M_050219_2,11639 HBL1_DMSO_200M_050219_2,11639,EGVLLGKVS False False SQPPVFKV 62.687512 451.271685779095 8311773.0 11635.0 ENSG00000130726|ENST00000253024|TRIM28;;nc|ENSG00000130726|Q13263-2|TRIM28 0.3443789879480998 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11640 62.689 54.0 1328100.0 25 0 105080.0 + + -1 VPLMKTTEI 9 111 516.2932872826839 1030.5720216321677 2 516.2935668826103 MULTI CID FTMS 0 0 0 11635 1004039.3125 1.0 0 0.0 5 Oxidation (M) _PVLM(Oxidation (M))GSSLVL_ ENST00000487921.5_1_17:56769962-56783250:+|nuORF;nc|ENSG00000108384|O43502-2|RAD51C;ENSG00000108384|ENST00000337432|RAD51C;ENST00000475762.5_1_17:56772326-56801433:+|nuORF 26.88365393820708 0.3646707531412818 4 VP{I|L}M{M(Oxidation (M))|F} 5 -1 49.464 0.0 0.0 4.7997 0.0 0.0 0.0 440.2277620904906 440.2277620904906 28.7898501052333 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.0 0.0 VP{I|L}M{M(Oxidation (M))|F} 4.7997 - 540 + 1 1.434 62807.9 1.0 6915 4723 11635 HBL1_DMSO_200M_050219_2,11640 HBL1_DMSO_200M_050219_2,11640,PVLMGSSLVL False False VPLMKTTEI 62.68891 516.29356688261 6926320.0 11635.0 ENST00000487921.5_1_17:56769962-56783250:+|nuORF;;nc|ENSG00000108384|O43502-2|RAD51C;;ENSG00000108384|ENST00000337432|RAD51C;;ENST00000475762.5_1_17:56772326-56801433:+|nuORF 4.4127843379974365 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11641 62.691 74.0 970240.0 25 0 98584.0 + -1 TFLDTMIIAY 10 103 602.3019428802515 1202.589332827303 2 602.3027221560478 MULTI CID FTMS 0 0 0 11635 578610.25 0.7725888695963925 -1 0.0526962280273437 6 Oxidation (M) _TFLDTM(Oxidation (M))IIAY_ REV__ENSG00000145723|ENST00000399004|GIN1;REV__nc|ENSG00000145723|Q9NXP7-3|GIN1 13.90604991867851 0.6142120002215601 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PV[PS]WTPY 10 -1 + 32.427 0.0 0.0 2.6964 2.6964 62.317 0.0 0.0 0.0 3.987803220352358 7.210084362531575 3.987803220352358 0.8804562952784067 0 0.468765315847925 0.0 1.0114393726401687 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PV[PS]WTPY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PV[PS]WM{[ET]|[MV]};[VP]KE[PS]WTPY;[VP]KE[PS]WM{[ET]|[MV]};[{I|L}T]K{[HG]|PP}TWTPY;[{I|L}T]K{[HG]|PP}TWM{[ET]|[MV]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PV[PS]{[DA]|[EG]}M{[ET]|[MV]};[VP]K[DP]TWTPY;[{I|L}T]KE[KC][YR]Y;[VP]K[DP]TWM{[ET]|[MV]} 2.6964;2.6232;2.2506;2.1774;2.135;2.0618;1.8611;1.6837;1.6756;1.6105 -;-;-;-;-;-;-;-;-;- 291 1 1.434 55036.7 1.0 6916 4723 11635 HBL1_DMSO_200M_050219_2,11641 HBL1_DMSO_200M_050219_2,11641,TFLDTMIIAY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11642 62.692 69.0 1073600.0 25 0 119400.0 41386 VPKTPVEI 8 103 441.7683182352048 881.5220835372097 2 441.7683898806572 MULTI CID FTMS 0 0 0 11635 549097.375 0.6161029618329347 19 -1.8549156188964844 7 Unmodified _VPKTPVEI_ ENST00000529587.1_1_11:9806704-9806878:-|nuORF 24.020572477871973 0.5389365498350341 4 VP 2 6 43.711 0.0 0.0 4.9586 0.0 0.0 0.0 682.3793298590608 682.3793298590608 22.451818904348144 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VP 4.9586 + + 304 + 1 1.434 62140.5 1.0 6917 4723 11635 HBL1_DMSO_200M_050219_2,11642 HBL1_DMSO_200M_050219_2,11642,VPKTPVEI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11643 62.7 431.0 413190.0 25 0 32113.0 + 32078 RVLPPSALQSV 11 153 583.8482282329863 1165.6819035327726 2 583.8480102419853 MULTI CID FTMS 0 0 0 11635 454725.46875 0.8047366883608512 1 -0.1433181762695312 8 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 88.36371040165146 0.0014365852967226 4 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 81.507 0.0 0.0 6.9922 6.9922 88.331 0.0 0.0 0.0 10.131795495543088 45.62138590924813 10.131795495543088 9.128498242810991 0 1.579689690656103 0.6989700043360187 1.5189301784845295 0.0 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[VP][R{I|L}][PS]A{I|L}QSV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[PS][PA]{I|L}[RV]{I|L}QSV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV;[RV]{I|L}P[PS]RRW;[VP]WK[{I|L}P]{I|L}QSV;[VP]WK[{I|L}P]{I|L}[AG]SV;[{I|L}A]G[VP][RV]{I|L}QDV 6.9922;6.2091;4.2725;3.9482;3.5049;3.162;2.9791;2.6724;1.8862;1.8693 +;-;-;-;-;-;-;-;-;- + 1025 1 1.434 136056.8 1.0 6918 4723 11635 HBL1_DMSO_200M_050219_2,11643 HBL1_DMSO_200M_050219_2,11643,RVLPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11644 62.703 175.0 540970.0 25 0 47604.0 + -1 KVIDSSDVVVQV 12 102 644.361826115039 0 644.3615600466728 PEAK CID FTMS 0 0 0 11635 429640.8125 1.0 0 0.0 9 Carbamidomethyl (C) _NLC(Carbamidomethyl (C))LFVPVVNL_ ENSG00000134697|ENST00000373062|GNL2 26.268140514670165 0.2743391275734092 4 VVV[DC]V{I|L}S 8 -1 38.863 0.0 0.0 3.0203 0.0 0.0 245.13196416268423 224.1047457330688 469.23670989575305 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 1.024227503252014 0.0 VVV[DC]V{I|L}S 3.0203 - 822 + 1 1.434 74495.8 1.0 6919 4723 11635 HBL1_DMSO_200M_050219_2,11644 HBL1_DMSO_200M_050219_2,11644,NLCLFVPVVNL False False KVIDSSDVVVQV 62.703366 644.361560046673 3433518.0 11635.0 ENSG00000134697|ENST00000373062|GNL2 3.3851691484451294 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11645 62.708 268.0 356660.0 25 0 36649.0 19571 LFSSSLVA 8 113 412.2307970525997 822.4470411719994 2 412.2306396365166 MULTI CID FTMS 0 0 0 11635 310490.25 0.7775844538330733 -1 0.0526962280273437 10 Unmodified _LFSSSLVA_ ENSG00000157954|ENST00000288828|WIPI2;ENST00000465102.5_1_7:5254197-5262304:+|nuORF;ENST00000466014.5_1_7:5232953-5270575:+|nuORF;ENST00000475309.5_1_7:5254056-5256899:+|nuORF;nc|ENSG00000157954|Q9Y4P8-2|WIPI2;nc|ENSG00000157954|Q9Y4P8-3|WIPI2;nc|ENSG00000157954|Q9Y4P8-4|WIPI2;nc|ENSG00000157954|Q9Y4P8-5|WIPI2;nc|ENSG00000157954|Q9Y4P8-6|WIPI2 5.760428011301431 0.7893668129297577 4 M 1 8 9.7539 0.0 0.0 1.186 0.0 0.0 673.3951593134042 0.0 673.3951593134042 0.0 1.1246991329674891 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.186 - 19 + 1 1.434 78754.6 1.0 6920 4723 11635 HBL1_DMSO_200M_050219_2,11645 HBL1_DMSO_200M_050219_2,11645,LFSSSLVA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11646 62.718 529.0 254770.0 25 0 26947.0 + 15735 IRLENEIQTY 10 119 639.8373644523145 1277.660175971429 2 639.8373290896416 MULTI CID FTMS 0 0 0 11635 291429.8125 1.0 0 0.0 11 Unmodified _IRLENEIQTY_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 63.22749603027936 0.0281198777558511 4 {[QN]|[E{I|L}]|[KN]}[R{I|L}]NE{I|L}QTY 10 2 + 65.007 0.0 0.0 5.088 5.088 71.866 0.0 0.0 0.0 0.4939177521576852 32.26114005663328 0.4939177521576852 1.9429357970573025 0 1.274227503252014 0.8538719643217619 0.3807196863200844 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}[R{I|L}]NE{I|L}QTY;[R{I|L}]{[QN]|[E{I|L}]|[KN]}NE{I|L}QTY;{[QN]|[E{I|L}]|[KN]}[R{I|L}]QD{I|L}QTY;[R{I|L}]{[QN]|[E{I|L}]|[KN]}QD{I|L}QTY;{[QN]|[E{I|L}]|[KN]}[R{I|L}]GGE{I|L}QTY;{[QN]|[E{I|L}]|[KN]}[R{I|L}]NE{I|L}[AG]TY;{[QN]|[E{I|L}]|[KN]}N[R{I|L}]E{I|L}QTY;[R{I|L}]{[QN]|[E{I|L}]|[KN]}NE{I|L}[AG]TY;[R{I|L}]{[QN]|[E{I|L}]|[KN]}GGE{I|L}QTY;{[QN]|[E{I|L}]|[KN]}[R{I|L}]QD{I|L}[AG]TY 5.088;4.9359;4.8524;4.7003;4.3707;4.3707;4.2729;4.2186;4.2186;4.1351 -;+;-;-;-;-;-;-;-;- + 1340 1 1.434 108895.1 1.0 6921 4723 11635 HBL1_DMSO_200M_050219_2,11646 HBL1_DMSO_200M_050219_2,11646,IRLENEIQTY True True IRLENEIQTY 62.717643 639.837329089642 1757303.625 11635.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 7.002179145812988 2.0 True 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 11647 62.729 624.0 494060.0 25 0 127380.0 + 18463 KYIEGVSDF 9 127 1057.5171639003322 1056.5098874337325 1 1057.522143542767 MULTI CID FTMS 0 0 0 11635 289255.0625 1.0 0 0.0 12 Unmodified _KYIEGVSDF_ ENSG00000197429|ENST00000396478|IPP;nc|ENSG00000197429|Q9Y573-2|IPP 72.96794272382148 0.0199516581995792 4 [YK]{I|L}EGV[YG]E 9 3 + 75.489 0.0 0.0 7.1452 7.1452 91.075 0.0 0.0 0.0 23.00530370539505 3.569233304795034 3.569233304795034 9.973024840566469 0 1.3996498648046138 1.154901959985743 1.1237125054200234 0.7614393726401688 [YK]{I|L}EGV[YG]E;[YK]{I|L}ER[YG]E;[YK]{I|L}EG[YR]E;[YK]{I|L}WV[YG]E;{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{M(Oxidation (M))|F}{I|L}{[HG]|PP}E;[YK][NG]KV[YG]E;[YK]{I|L}[DG]{I|L}[YG]E;{M(Oxidation (M))|F}[YG]VKYS{[HG]|PP};{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{M(Oxidation (M))|F}[NP][KP];{[QV]|[N{I|L}]|[RA]|[KV]}DNENN[KP] 7.1452;6.2012;5.9121;4.9477;4.0469;3.4257;3.4161;3.3454;3.0321;3.0296 -;-;-;-;-;-;-;-;-;- 7395 1 1.434 190142.6 1.0 6922 4723 11635 HBL1_DMSO_200M_050219_2,11647 HBL1_DMSO_200M_050219_2,11647,KYIEGVSDF True True KYIEGVSDF 62.728572 1057.52214354277 4881668.5 11635.0 ENSG00000197429|ENST00000396478|IPP;;nc|ENSG00000197429|Q9Y573-2|IPP 7.994884332021077 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11648 62.741 741.0 372760.0 25 0 48128.0 14484 IGGGIALY 8 256 382.2201799290117 762.4258069248234 2 382.2195617556572 MULTI CID FTMS 0 0 0 11635 254211.75 0.0634211206645188 -3 0.2831649780273437 13 Unmodified _IGGGIALY_ ENSG00000117600|ENST00000370185|PLPPR4;nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;nc|ENSG00000117600|Q7Z2D5|PLPPR4 0.7936320650641473 0.8195151834710337 4 {I|L} 1 7 8.7724 0.0 0.0 1.1506 0.0 0.0 631.3305443289235 0.0 631.3305443289235 0.0 1.8679033140629624 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1506 + + 22 + 1 1.434 212015.1 1.0 6923 4723 11635 HBL1_DMSO_200M_050219_2,11648 HBL1_DMSO_200M_050219_2,11648,IGGGIALY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11649 62.753 665.0 373190.0 25 0 28332.0 + 40220 VGRLQGLTV 9 202 471.7903060411755 941.566059149151 2 471.7899658083916 MULTI CID FTMS 0 0 0 11635 231642.828125 1.0 0 0.0 14 Unmodified _VGRLQGLTV_ ENSG00000135476|ENST00000257934|ESPL1;nc|ENSG00000135476|Q14674-2|ESPL1 56.17704186161178 0.0281986971544335 4 [{M(Oxidation (M))|F}V]PP{I|L}G{I|L}TV 9 4 + 59.048 0.0 0.0 6.2713 6.2713 75.075 0.0 0.0 0.0 1.1429736427644317 16.478174818886373 1.1429736427644317 1.1429736427644317 0 1.3494850021680094 2.0 0.4247425010840047 0.0 [{M(Oxidation (M))|F}V]PP{I|L}G{I|L}TV;[VG]R{I|L}QG{I|L}TV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[{I|L}V]G{I|L}TV;[{M(Oxidation (M))|F}V]PP{I|L}AVTV;[VG]R{I|L}QAVTV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[{I|L}V]AVTV;[{M(Oxidation (M))|F}V]PPAV{I|L}TV;[VG]R{I|L}[AG]G{I|L}TV;[{M(Oxidation (M))|F}V]PP{I|L}GT{I|L}V;[{M(Oxidation (M))|F}V][HK]V{I|L}TV 6.2713;6.1499;5.7851;5.7646;5.7231;5.3583;5.3122;5.1719;5.1624;5.1079 -;+;-;-;-;-;-;-;-;- + 5271 1 1.434 188735.7 1.0 6924 4723 11635 HBL1_DMSO_200M_050219_2,11649 HBL1_DMSO_200M_050219_2,11649,VGRLQGLTV True True VGRLQGLTV 62.752972 471.789965808392 2643032.75 11635.0 nc|ENSG00000135476|Q14674-2|ESPL1;;ENSG00000135476|ENST00000257934|ESPL1 -0.3768719832102458 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11650 62.763 599.0 289140.0 25 0 20335.0 + 3776 DAHIYLNHI 9 204 548.2829931927653 1094.5514334523305 2 548.2845947146416 MULTI CID FTMS 0 0 0 11635 230167.328125 0.012330180322878 7 -0.6526145935058594 15 Unmodified _DAHIYLNHI_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 71.70789743142352 0.0204387454931768 4 {[DA]|[EG]}H{I|L}Y{I|L}NH{I|L} 9 0 + 77.304 0.0 0.0 7.0626 7.0626 86.057 0.0 0.0 0.0 11.008209192124127 6.232492903979008 6.232492903979008 6.232492903979008 0 2.293157681736544 0.8860566476931632 0.0 1.110924374808178 + + {[DA]|[EG]}H{I|L}Y{I|L}NH{I|L};{[DA]|[EG]}H{I|L}Y{I|L}N{I|L}H;{[DA]|[EG]}{I|L}HY{I|L}NH{I|L};{I|L}EGHY{I|L}NH{I|L};{[DA]|[EG]}H{I|L}Y{I|L}HN{I|L};{[DA]|[EG]}H{I|L}Y{I|L}GGH{I|L};{[DA]|[EG]}{I|L}HY{I|L}N{I|L}H;{I|L}EGHY{I|L}N{I|L}H;{[DA]|[EG]}H{I|L}Y{I|L}HQV;{[DA]|[EG]}H{I|L}Y{I|L}GG{I|L}H 7.0626;6.4932;5.7079;5.6705;5.3513;5.2064;5.1385;5.1011;5.0208;4.637 +;-;-;-;-;-;-;-;-;- + 2960 + 1 1.434 132006.8 1.0 6925 4723 11635 HBL1_DMSO_200M_050219_2,11650 HBL1_DMSO_200M_050219_2,11650,DAHIYLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11651 62.775 580.0 207320.0 25 0 25207.0 + 3424 AYYEFREEAY 10 117 670.7925266914596 1339.570500449719 2 670.7943603396416 MULTI CID FTMS 0 0 0 11635 210608.09375 0.694556016316987 1 -0.1433181762695312 16 Unmodified _AYYEFREEAY_ ENSG00000214753|ENST00000301785|HNRNPUL2 53.31671820480216 0.0606844387689228 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YE[KA]QAYAY 11 5 + 68.083 0.0 0.0 5.0825 5.0825 78.388 0.0 0.0 0.0 21.40356996825841 16.57577319177794 16.57577319177794 6.4035699682584095 0 2.2614393726401687 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YE[KA]QAYAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YE{M(Oxidation (M))|F}REEAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YE[KA][AG]AYAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YE[W{I|L}]{[{M(Oxidation (M))|F}D]|MM}AY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YE[W{I|L}][YV]AY;YYAE{M(Oxidation (M))|F}REEAY;[YE]Y[RN]QAYAY;[YE]YA{M(Oxidation (M))|F}REEAY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YE{M(Oxidation (M))|F}RE{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K][YK]EY{[ES]|[DT]|[{I|L}C]} 5.0825;4.6045;4.401;3.5689;3.5689;3.4847;3.2971;3.0523;3.0295;3.0252 -;+;-;-;-;-;-;-;-;- + 1327 1 1.434 90835.8 1.0 6926 4723 11635 HBL1_DMSO_200M_050219_2,11651 HBL1_DMSO_200M_050219_2,11651,AYYEFREEAY True True AYYEFREEAY 62.77512 670.794360339642 2319543.0 11635.0 ENSG00000214753|ENST00000301785|HNRNPUL2 7.77731990814209 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11652 62.787 653.0 104970.0 25 0 5437.0 + 14253 ITHPMDFQTV 10 124 594.3100507770794 1186.6055486209586 2 594.7902099490166 MULTI CID FTMS 0 0 0 -1 0 17 Unmodified _IEDIQQEITV_ ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B 10.823927491677226 0.6659270209832991 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K][TA]C(Carbamidomethyl (C))V 8 9 20.123 0.0 0.0 1.6959 0.0 0.0 0.0 230.18675303080275 230.18675303080275 6.852190335775745 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K][TA]C(Carbamidomethyl (C))V 1.6959 - 135 1 1.434 56531.2 1.0 6927 4723 11635 HBL1_DMSO_200M_050219_2,11652 HBL1_DMSO_200M_050219_2,11652,IEDIQQEITV False False ITHPMDFQTV 62.786503 594.790209949017 741097.5 11635.0 ENSG00000009954|ENST00000339594|BAZ1B;;nc|ENSG00000009954|Q9UIG0-2|BAZ1B 4.536098480224609 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11653 62.8 800.0 360490.0 25 0 29004.0 -1 0 269 340.2598216139572 678.5050902947144 2 340.2592956423759 MULTI CID FTMS 0 0 0 11635 133785.75 0.2551762498685717 7 -0.6526145935058594 18 4 {I|L}{I|L}{I|L}{I|L}S 5 -1 45.674 0.0 0.0 6.7316 0.0 0.0 0.0 136.11361108951408 136.11361108951408 29.10269334003761 0.0 0.0 0.0 0 0.5 1.5228787452803376 1.274227503252014 0.0 {I|L}{I|L}{I|L}{I|L}S 6.7316 - 49 + 1 1.434 224740.3 0.8299999833106995 6928 4723 11635 HBL1_DMSO_200M_050219_2,11653 HBL1_DMSO_200M_050219_2,11653, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11654 62.813 660.0 248150.0 25 0 26023.0 11843 GLRGQVTWYR 10 133 618.3350193466399 1234.6554857600795 2 618.8378784060478 MULTI CID FTMS 0 0 0 11635 128631.3515625 0.5129660855311264 -1 0.0526962280273437 19 Unmodified _GLRGQVTWYR_ ENSG00000176834|ENST00000359236|VSIG10;nc|ENSG00000176834|Q8N0Z9-2|VSIG10 13.90604991867851 0.6142120002215601 4 [DP]E{I|L}AV[KT]DP 10 8 39.614 0.0 0.0 3.2085 0.0 0.0 0.0 166.07599094684306 166.07599094684306 13.502701750854657 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [DP]E{I|L}AV[KT]DP 3.2085 - 1034 1 1.434 125490.2 1.0 6929 4723 11635 HBL1_DMSO_200M_050219_2,11654 HBL1_DMSO_200M_050219_2,11654,GLRGQVTWYR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11655 62.823 581.0 220100.0 25 0 10171.0 + 32300 RWTLIGLVSN 10 172 579.8356094685338 1157.6566660038677 2 579.8369018435478 MULTI CID FTMS 0 0 0 11635 132744.046875 0.5080254397254244 -1 0.0526962280273437 20 Unmodified _RWTLIGLVSN_ REV__ENST00000380152.7_1_13:32929245-32929386:+|nuORF 20.41453444215458 0.5050059513928961 4 [{I|L}P]KT{[WT]|[RM]}{I|L}NW 9 -1 + 46.833 0.0 0.0 4.0455 4.0455 73.638 0.0 0.0 0.0 16.651603310239903 4.713403050078782 4.713403050078782 5.752574989159953 0 0.0 1.3010299956639813 0.6989700043360187 0.0 [{I|L}P]KT{[WT]|[RM]}{I|L}NW;[{I|L}P]KT{[WT]|[RM]}RAW;[{I|L}P]KT{[WT]|[RM]}{I|L}GGW;[{I|L}P]KT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}APAW;[{I|L}P]KT{[WT]|[RM]}[VG]AW;[VG]A[{I|L}V]{[WT]|[RM]}{I|L}NW;[{I|L}P]KT{[WT]|[RM]}Y[H{I|L}];[{I|L}T][KP]{[WT]|[RM]}{I|L}NW;[{I|L}V]K{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}NW;[VG]A[{I|L}V]{[WT]|[RM]}RAW 4.0455;3.5486;3.2501;2.8137;2.7531;2.2064;2.1052;2.0318;1.7931;1.7095 -;-;-;-;-;-;-;-;-;- 1322 1 1.434 101541.8 1.0 6930 4723 11635 HBL1_DMSO_200M_050219_2,11655 HBL1_DMSO_200M_050219_2,11655,RWTLIGLVSN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11657 62.827 7.0 3660800.0 25 0 361810.0 + 934 AFIDQSQSL 9 46 504.75338894443706 1007.492224955674 2 504.7532836794853 MULTI CID FTMS 0 0 0 11656 5502606.5 0.126414122213866 3 -0.2741203308105469 1 Unmodified _AFIDQSQSL_ ENSG00000167325|ENST00000300738|RRM1 21.74664581756881 0.2544899275067181 4 S{I|L} 2 7 18.073 0.0 0.0 1.7939 0.0 0.0 789.3652851136804 0.0 789.3652851136804 0.0 9.644556508912173 0.0 0.0 0 0.0 0.0 0.25 0.0 + S{I|L} 1.7939 + + 25 + 1 1.41 26703.0 1.0 6931 4724 11656 HBL1_DMSO_200M_050219_2,11657 HBL1_DMSO_200M_050219_2,11657,AFIDQSQSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11658 62.829 60.0 591420.0 25 0 51501.0 + 10880 GAFVHFHGV 9 78 485.7486124010658 969.4826718689316 2 485.7484008669853 MULTI CID FTMS 0 0 0 11656 254629.21875 0.0892590947463677 2 -0.1741752624511718 2 Unmodified _GAFVHFHGV_ ENSG00000006831|ENST00000357103|ADIPOR2 45.7499826716795 0.0496882803020414 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VH{M(Oxidation (M))|F}HGV 8 2 + 37.802 0.0 0.0 3.8992 3.8992 81.533 0.0 0.0 0.0 25.583362792012 10.177287669604311 10.177287669604311 24.948500216800937 0 0.6989700043360187 0.0 0.0 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VH{M(Oxidation (M))|F}HGV;{[{M(Oxidation (M))|F}H]|[RQ]}V[DP]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[{M(Oxidation (M))|F}T]{[ET]|[MV]}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[{M(Oxidation (M))|F}T]{[ES]|[DT]|[{I|L}C]}{I|L} 3.8992;1.3258;1.1442;0.88642 -;-;-;- 89 + 1 1.41 33955.5 1.0 6932 4724 11656 HBL1_DMSO_200M_050219_2,11658 HBL1_DMSO_200M_050219_2,11658,GAFVHFHGV True True GAFVHFHGV 62.828769 485.748400866985 44913598.0 11656.0 ENSG00000006831|ENST00000357103|ADIPOR2 9.838379859924316 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11659 62.83 31.0 1330900.0 25 0 177740.0 + 13603 HPNSAVLMV 9 62 484.2550387060982 966.4955244789963 2 484.2554504275322 MULTI CID FTMS 0 0 0 11656 1758799.5 1.0 0 0.0 3 Unmodified _HPNSAVLMV_ ENSG00000163811|ENST00000407426|WDR43 36.12702656103203 0.0967173616627612 4 [{M(Oxidation (M))|F}T]{I|L}VH[HD]V 8 8 + 46.362 0.0 0.0 4.7969 4.7969 76.879 0.0 0.0 0.0 32.382287586051106 5.788493772929044 5.788493772929044 6.034087492996392 0 1.0 0.0 1.174742501084005 0.0 [{M(Oxidation (M))|F}T]{I|L}VH[HD]V;{[TV]|[{I|L}S]}[NG]PH{I|L}MV;[{M(Oxidation (M))|F}T]{I|L}HV[HD]V;{[TV]|[{I|L}S]}[NG]P{I|L}HMV;[{M(Oxidation (M))|F}T]H{I|L}V[HD]V 4.7969;4.1726;4.1489;3.1102;3.0865 -;-;-;-;- 102 + 1 1.41 38326.4 1.0 6933 4724 11656 HBL1_DMSO_200M_050219_2,11659 HBL1_DMSO_200M_050219_2,11659,HPNSAVLMV True True HPNSAVLMV 62.829948 484.255450427532 29054188.0 11656.0 ENSG00000163811|ENST00000407426|WDR43 6.492245515187581 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11660 62.831 29.0 1509600.0 25 0 220560.0 + 23994 LVVLLGSWV 9 61 493.30647369016935 984.5983944471388 2 493.3061096072197 MULTI CID FTMS 0 0 0 11656 1373980.25 0.5681374118384543 -2 0.196014404296875 4 Unmodified _LVVLLGSWV_ REV__ENSG00000124786|ENST00000644923|SLC35B3 23.1484247019978 0.2366544122328345 4 {I|L}VVVHHD 7 -1 57.836 0.0 0.0 5.874 0.0 0.0 0.0 182.1387117975219 182.1387117975219 43.85615093082315 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {I|L}VVVHHD 5.874 - 31 + 1 1.41 40526.1 1.0 6934 4724 11656 HBL1_DMSO_200M_050219_2,11660 HBL1_DMSO_200M_050219_2,11660,LVVLLGSWV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11661 62.832 28.0 1403400.0 25 0 243370.0 + 22478 LPVNAQNYV 9 70 509.2710193652375 1016.527485797275 2 509.2718078494072 MULTI CID FTMS 0 0 0 11656 1249319.75 0.0719636989113624 -9 0.8423690795898438 5 Unmodified _LPVNAQNYV_ ENSG00000035687|ENST00000366535|ADSS2 36.04419817259434 0.0971720506436186 4 {I|L}AQN[YV] 6 3 33.822 0.0 0.0 3.3272 0.0 0.0 310.1644459455094 0.0 310.1644459455094 0.0 11.603714508649844 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.7302046884880937 {I|L}AQN[YV] 3.3272 - 132 1 1.41 36485.7 1.0 6935 4724 11656 HBL1_DMSO_200M_050219_2,11661 HBL1_DMSO_200M_050219_2,11661,LPVNAQNYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11662 62.834 57.0 940650.0 25 0 79156.0 26979 PEFYALSPVP 10 77 560.2916818187286 1118.5688107042572 2 560.2925903201103 MULTI CID FTMS 0 0 0 11656 906704.8125 1.0 0 0.0 6 Unmodified _PEFYALSPVP_ ENSG00000187690|ENST00000342995|EZHIP 15.847184025352805 0.5816416552707754 4 [VP]TT{I|L} 5 8 25.123 0.0 0.0 2.246 0.0 0.0 0.0 604.2436513627134 604.2436513627134 7.638670153525435 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.0941876774005248 0.0 [VP]TT{I|L} 2.246 - 162 1 1.41 48969.0 1.0 6936 4724 11656 HBL1_DMSO_200M_050219_2,11662 HBL1_DMSO_200M_050219_2,11662,PEFYALSPVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11663 62.841 384.0 326970.0 25 0 16589.0 + 13297 HIVEALETDV 10 140 563.2925685188812 1124.5705841045624 2 563.2937499880791 MULTI CID FTMS 0 0 0 11656 378060.875 0.3657499157120889 2 -0.1741752624511718 7 Unmodified _HIVEALETDV_ ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK 71.70789743142352 0.0188816056000227 4 [H{I|L}]VEA{I|L}ETDV 10 0 + 85.966 0.0 0.0 7.6443 7.6443 88.25 0.0 0.0 0.0 18.77513725768253 72.04796183634159 18.77513725768253 6.817496819840656 0 1.2614393726401687 1.3010299956639813 1.174742501084005 0.0 + + [H{I|L}]VEA{I|L}ETDV;[H{I|L}]VEA{I|L}TEDV;[H{I|L}]{[CP]|[EA]}V{I|L}ETDV;[DV][HV]V{I|L}ETDV;[DV]VVH{I|L}ETDV;{[QN]|[E{I|L}]|[KN]}[HV]A{I|L}ETDV;[H{I|L}]{[CP]|[EA]}V{I|L}TEDV;{NN|[MP]|[D{I|L}]|[EV]}[H{I|L}]A{I|L}ETDV;{[QN]|[E{I|L}]|[KN]}G{I|L}H{I|L}ETDV;{NN|[MP]|[D{I|L}]|[EV]}A{I|L}H{I|L}ETDV 7.6443;7.0381;5.7797;5.3554;5.3554;5.2818;5.1735;5.1628;4.9892;4.8702 +;-;-;-;-;-;-;-;-;- + 788 1 1.41 101565.8 1.0 6937 4724 11656 HBL1_DMSO_200M_050219_2,11663 HBL1_DMSO_200M_050219_2,11663,HIVEALETDV True True HIVEALETDV 62.840661 563.293749988079 18727118.0 11656.0 ENSG00000168078|ENST00000301905|PBK;;nc|ENSG00000168078|Q96KB5-2|PBK 6.860698699951172 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11664 62.848 392.0 305520.0 25 0 39116.0 39222 TYYEADDIIQ 10 106 615.7799422353803 0 615.7795898318291 PEAK CID FTMS 0 0 0 11656 395374.46875 1.0 0 0.0 8 Unmodified _TYYEADDIIQ_ ENSG00000145642|ENST00000389074|SHISAL2B 18.1463463914782 0.3130158145628772 4 {I|L}{I|L} 2 8 18.711 0.0 0.0 1.5218 0.0 0.0 146.071528902598 854.2866095416381 1000.358138444236 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {I|L}{I|L} 1.5218 + + 99 + 1 1.41 90600.7 1.0 6938 4724 11656 HBL1_DMSO_200M_050219_2,11664 HBL1_DMSO_200M_050219_2,11664,TYYEADDIIQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11665 62.855 400.0 485710.0 25 0 35917.0 + 18263 KVIEEEWQQV 10 157 644.3328144523081 1286.651075971416 2 644.3330566287041 MULTI CID FTMS 0 0 0 11656 352061.4375 0.5881695186309235 -2 0.196014404296875 9 Unmodified _KVIEEEWQQV_ nc|ENSG00000120802|P42166|TMPO 57.24910588100465 0.0438022649904578 4 [AG]VS{I|L}V[NS]WQQV 12 6 + 77.845 0.0 0.0 6.0502 6.0502 75.755 0.0 0.0 0.0 4.920238784076815 14.32711430755279 4.920238784076815 1.8406018872695569 0 0.6861818737241735 2.0 1.1549471895720984 0.3807196863200844 [AG]VS{I|L}V[NS]WQQV;[AG]VS{I|L}{[WN]|[YH]}WQQV;[AG]VSV{I|L}[NS]WQQV;[AG]V[RD]QTWQQV;[AG]VSV[WQ]WQQV;{[QV]|[N{I|L}]|[RA]|[KV]}SSPQTWQQV;[AG]VSSPQT[VS]QQV;{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}V[NS]WQQV;[AG]VVTV[NS]WQQV;{[QV]|[N{I|L}]|[RA]|[KV]}EAAQTWQQV 6.0502;5.9072;5.8778;5.7348;5.7348;5.6678;5.5207;5.4903;5.4455;5.4373 -;-;-;-;-;-;-;-;-;- 18500 1 1.41 146638.5 1.0 6939 4724 11656 HBL1_DMSO_200M_050219_2,11665 HBL1_DMSO_200M_050219_2,11665,KVIEEEWQQV True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11666 62.862 396.0 364840.0 25 0 47037.0 + 13789 KMSELQTYV 9 173 549.2761622779419 1096.5377716226835 2 549.7797729372978 MULTI CID FTMS 0 0 0 11656 366433.84375 1.0 0 0.0 10 Unmodified _HSRDRSPVGS_ ENSG00000117724|ENST00000366955|CENPF 12.240655878213236 0.6421556946785427 4 [YT][NP]{I|L}QA{M(Oxidation (M))|F}[SG] 10 8 + 51.784 0.0 0.0 4.7225 4.7225 78.076 0.0 0.0 0.0 8.155522404999843 7.269987279362624 7.269987279362624 7.5404627391503 0 0.0 1.6989700043360187 0.7386692553033356 0.7742275032520141 [YT][NP]{I|L}QA{M(Oxidation (M))|F}[SG];[YT][NP]{I|L}QT{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[AG]TV{M(Oxidation (M))|F}{I|L}QA{M(Oxidation (M))|F}[SG];[YT][NP]{I|L}[AG]A{M(Oxidation (M))|F}[SG];[QT]V{M(Oxidation (M))|F}{I|L}QA{M(Oxidation (M))|F}[SG];{[QV]|[N{I|L}]|[RA]|[KV]}T{M(Oxidation (M))|F}{I|L}QA{M(Oxidation (M))|F}[SG];[AG]{I|L}S{M(Oxidation (M))|F}{I|L}QA{M(Oxidation (M))|F}[SG];[Q{I|L}]S{M(Oxidation (M))|F}{I|L}QA{M(Oxidation (M))|F}[SG];[{I|L}T]N{M(Oxidation (M))|F}{I|L}QA{M(Oxidation (M))|F}[SG];{[SA]|[TG]}AV{M(Oxidation (M))|F}{I|L}QA{M(Oxidation (M))|F}[SG] 4.7225;4.0349;3.9788;3.8868;3.8764;3.844;3.7323;3.6299;3.4911;3.3563 -;-;-;-;-;-;-;-;-;- 3385 1 1.41 113738.8 1.0 6940 4724 11656 HBL1_DMSO_200M_050219_2,11666 HBL1_DMSO_200M_050219_2,11666,HSRDRSPVGS False False KMSELQTYV 62.861965 549.779772937298 1626408.125 11656.0 ENSG00000117724|ENST00000366955|CENPF 5.808347543080648 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11667 62.871 525.0 450500.0 25 0 39200.0 + 41615 VPPPAAAA 8 221 347.1989892217684 692.3834255103367 2 347.1984741091728 MULTI CID FTMS 0 0 0 11656 347861.125 0.3850262666734921 -1 0.1433181762695312 11 Unmodified _VPPPAAAA_ REV__ENSG00000176208|ENST00000321990|ATAD5;REV__nc|ENSG00000176208|Q96QE3-2|ATAD5 0.0 0.8243325171867699 4 {I|L} 1 -1 8.8735 0.0 0.0 1.2816 0.0 0.0 561.2880103265461 0.0 561.2880103265461 0.0 -3.433677739595036 -3.433677739595036 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2816 - 20 + 1 1.41 185268.4 1.0 6941 4724 11656 HBL1_DMSO_200M_050219_2,11667 HBL1_DMSO_200M_050219_2,11667,VPPPAAAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11668 62.879 445.0 189980.0 25 0 9427.3 + -1 NMFCTRLSRCF 11 95 746.3352823006574 1490.6560116681146 2 746.3369018435478 MULTI CID FTMS 0 0 0 11656 320184.0625 0.5634347695446764 2 -0.1741752624511718 12 2 Carbamidomethyl (C) _NMFC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 8.745405648335112 0.8338865417133445 4 [MN]PN{I|L}NADQR[DG]{M(Oxidation (M))|F} 13 -1 + 72.911 0.0 0.0 4.8912 4.8912 77.936 0.0 0.0 0.0 52.03874726922278 2.940420414473365 2.940420414473365 6.642078980768062 0 0.7614393726401688 1.5228787452803376 0.3807196863200844 0.4247425010840047 [MN]PN{I|L}NADQR[DG]{M(Oxidation (M))|F};[MN]PN{I|L}NWQR[DG]{M(Oxidation (M))|F};[MN]PN{I|L}NADQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}T];[MN]PN{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PGG{I|L}NADQR[DG]{M(Oxidation (M))|F};[MN]PN{I|L}GGADQR[DG]{M(Oxidation (M))|F};[MN]PN{I|L}NAD[AG]R[DG]{M(Oxidation (M))|F};[MN]PN{I|L}NWQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}T];[MN]PN{I|L}NWQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PGG{I|L}NWQR[DG]{M(Oxidation (M))|F} 4.8912;4.4456;4.4329;4.3258;4.2826;4.2826;4.2826;3.9873;3.8802;3.8353 -;-;-;-;-;-;-;-;-;- 427 + 1 1.41 63166.8 1.0 6942 4724 11656 HBL1_DMSO_200M_050219_2,11668 HBL1_DMSO_200M_050219_2,11668,NMFCTRLSRCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11669 62.887 425.0 533200.0 25 0 31067.0 + 37411 TLARDTSASTL 11 187 568.2990882343107 1134.583623535421 2 568.2992431521416 MULTI CID FTMS 0 0 0 11656 307291.3125 0.0263250751673677 -9 0.8423690795898438 13 Unmodified _TLARDTSASTL_ REV__ENST00000547843.1_1_12:72058272-72058662:+|nuORF 13.042465956692816 0.7638483625850725 4 [{I|L}P]KQTQHV 8 -1 34.23 0.0 0.0 3.0169 0.0 0.0 0.0 200.05284462173805 200.05284462173805 2.898356765906115 0.0 0.0 0.0 0 0.4247425010840047 1.0457574905606752 0.6989700043360187 0.3252574989159953 [{I|L}P]KQTQHV 3.0169 - 4996 1 1.41 171768.8 1.0 6943 4724 11656 HBL1_DMSO_200M_050219_2,11669 HBL1_DMSO_200M_050219_2,11669,TLARDTSASTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11670 62.898 546.0 214280.0 25 0 50457.0 -1 0 83 1057.847094714642 0 1057.847094714642 PEAK CID FTMS 0 0 0 -1 0 14 4 {M(Oxidation (M))|F}DSRE 5 -1 25.534 0.0 0.0 1.208 0.0 0.0 1075.1774449314796 401.2201326959594 1476.397577627439 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5356668758921829 0.0 {M(Oxidation (M))|F}DSRE 1.208 - 345 + 1 1.41 79683.4 1.0 6944 4724 11656 HBL1_DMSO_200M_050219_2,11670 HBL1_DMSO_200M_050219_2,11670, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11671 62.907 524.0 344690.0 25 0 33040.0 -1 0 121 905.4539282407336 0 905.4511596560478 PEAK CID FTMS 0 0 0 11656 243418.078125 1.0 0 0.0 15 4 {I|L}[NP]{I|L}NEE 7 -1 20.482 0.0 0.0 1.1323 0.0 0.0 137.06335035430112 859.4157808893186 996.4791312436198 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 {I|L}[NP]{I|L}NEE 1.1323 - 762 + 1 1.41 122326.8 1.0 6945 4724 11656 HBL1_DMSO_200M_050219_2,11671 HBL1_DMSO_200M_050219_2,11671, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11672 62.916 526.0 579350.0 25 0 64179.0 + 22163 LPPSVVATV 9 109 882.5298750409006 881.5225985743006 1 882.5358764529228 MULTI CID FTMS 0 0 0 11656 180660.390625 0.4537854699668566 -1 0.1433181762695312 16 Unmodified _LPPSVVATV_ ENSG00000115421|ENST00000238714|PAPOLG;nc|ENSG00000115421|Q9BWT3-2|PAPOLG 104.79918948944588 0.0084531067040494 4 [VP]SP{I|L}VATV 9 4 + 77.108 0.0 0.0 8.7471 8.7471 81.042 0.0 0.0 0.0 0.950528104279016 4.515449934959719 0.950528104279016 0.950528104279016 0 0.2215141619232908 1.0457574905606752 2.1861818737241734 0.0 [VP]SP{I|L}VATV;[{I|L}P]PSVVATV;[VP]SP{I|L}VAS{I|L};[{I|L}P]PSVVAS{I|L};[VP]SPV{I|L}ATV;[VP]SP{I|L}G{I|L}TV;[{I|L}P]PSVG{I|L}TV;[PS]VP{I|L}VATV;[VP]SVP{I|L}ATV;[{I|L}P][TA]P{I|L}ATV 8.7471;8.6393;8.2349;8.127;7.9737;7.8369;7.729;7.7025;7.6098;7.5897 -;+;-;-;-;-;-;-;-;- + 3118 1 1.41 206037.6 1.0 6946 4724 11656 HBL1_DMSO_200M_050219_2,11672 HBL1_DMSO_200M_050219_2,11672,LPPSVVATV True True LPPSVVATV 62.91605 882.535876452923 8252008.0 11656.0 ENSG00000115421|ENST00000238714|PAPOLG;;nc|ENSG00000115421|Q9BWT3-2|PAPOLG 5.954374313354492 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11673 62.928 700.0 525990.0 25 0 57586.0 44049 YIMKIKPP 8 242 330.5324354067559 988.5754768204677 3 330.5319702029228 MULTI CID FTMS 0 0 0 11656 202671.171875 0.0185580642252549 -30 2.8946304321289062 17 Unmodified _YIMKIKPP_ ENSG00000140527|ENST00000268130|WDR93;nc|ENSG00000140527|Q6P2C0-2|WDR93 16.942295170755138 0.6606234159769251 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 5 + 42.701 0.0 0.0 4.3195 4.3195 72.001 0.0 0.0 0.0 15.684538506645168 4.147997822783246 4.147997822783246 3.6048038646947305 0 0.0 0.8860566476931632 0.0 0.0968040358200661 YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L};YP{M(Oxidation (M))|F}KP{I|L}[KP];YP{M(Oxidation (M))|F}K{I|L}P[KP];Y{I|L}MKP{I|L}[KP];Y{I|L}MK{I|L}P[KP];YP{M(Oxidation (M))|F}{I|L}KP[KP];Y{I|L}M{I|L}KP[KP];YP{I|L}{M(Oxidation (M))|F}KP[KP];Y{I|L}P{M(Oxidation (M))|F}KP[KP] 4.3195;3.9548;3.3578;3.21;2.9932;2.8454;2.503;2.1383;2.0203;1.6557 -;-;-;-;-;-;-;-;-;- 322 + 1 1.41 295512.8 1.0 6947 4724 11656 HBL1_DMSO_200M_050219_2,11673 HBL1_DMSO_200M_050219_2,11673,YIMKIKPP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11674 62.939 572.0 286560.0 25 0 20191.0 27565 PLARAFPPA 9 177 470.2723474312812 938.5301419293623 2 470.2733947634697 MULTI CID FTMS 0 0 0 11656 195814.046875 0.4092421308375812 -5 0.5037803649902344 18 Unmodified _PLARAFPPA_ ENSG00000113430|ENST00000231357|IRX4;nc|ENSG00000113430|P78413-2|IRX4 24.67388899826682 0.2172451872415813 4 MP[K{I|L}][VS]PD 8 7 39.806 0.0 0.0 4.2414 0.0 0.0 0.0 68.05146967105702 68.05146967105702 19.602074571408927 0.0 0.0 0.0 0 0.8494850021680094 0.585026652029182 0.5451140161145328 0.0 MP[K{I|L}][VS]PD 4.2414 - 485 + 1 1.41 127798.8 1.0 6948 4724 11656 HBL1_DMSO_200M_050219_2,11674 HBL1_DMSO_200M_050219_2,11674,PLARAFPPA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11675 62.952 706.0 583960.0 25 0 62100.0 + 10882 GAFVHFHGV 9 280 324.16819955373745 969.4827692614124 3 324.5023071169853 MULTI CID FTMS 0 0 0 11656 94318.5078125 0.0556233146361457 2 -0.1741752624511718 19 Unmodified _GAFVHFHGV_ ENSG00000006831|ENST00000357103|ADIPOR2 9.347437153973935 0.588369872918737 4 P{I|L}VAH{I|L} 6 7 31.604 0.0 0.0 3.2599 0.0 0.0 321.0834876570577 0.0 321.0834876570577 0.0 7.447274948966935 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}VAH{I|L} 3.2599 - 238 + 1 1.41 324898.6 1.0 6949 4724 11656 HBL1_DMSO_200M_050219_2,11675 HBL1_DMSO_200M_050219_2,11675,GAFVHFHGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11676 62.963 651.0 163300.0 25 0 26073.0 -1 0 76 877.6451293826103 0 877.6451293826103 PEAK CID FTMS 0 0 0 -1 0 20 4 {I|L}PS 3 -1 19.425 0.0 0.0 1.1079 0.0 0.0 757.6719093574623 695.4126599825252 1453.0845693399874 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 {I|L}PS 1.1079 - 133 + 1 1.41 79673.5 1.0 6950 4724 11656 HBL1_DMSO_200M_050219_2,11676 HBL1_DMSO_200M_050219_2,11676, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11678 62.967 0.26 183030000.0 25 0 14055000.0 + 22354 LPSPLKQTI 9 69 498.8081792005347 995.6018054678694 2 498.8086120486259 MULTI CID FTMS 0 0 0 11677 211279488.0 0.7974365538193077 -2 0.2831268310546875 1 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 40.23920728925047 0.0741434193262949 4 {I|L}PS[{I|L}P]KQT{I|L} 9 0 + 73.254 0.0 0.0 7.3578 7.3578 90.391 0.0 0.0 0.0 45.34949089312384 12.98332479720628 12.98332479720628 9.208187539523747 0 1.2614393726401687 1.6989700043360187 0.3807196863200844 0.0 + + {I|L}PS[{I|L}P]KQT{I|L};{I|L}PS[{I|L}P]K[AG]T{I|L} 7.3578;6.4329 +;- + 391 + 1 1.387 44300.4 1.0 6951 4725 11677 HBL1_DMSO_200M_050219_2,11678 HBL1_DMSO_200M_050219_2,11678,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11679 62.968 5.3 5701600.0 25 0 484950.0 45492 YTNELQETL 9 60 555.7669558359238 1109.5193587386475 2 555.7679321169853 MULTI CID FTMS 0 0 0 11677 7351601.5 0.4658821673744526 1 -0.0343666076660156 2 Unmodified _YTNELQETL_ ENSG00000183735|ENST00000331710|TBK1;ENST00000545392.1_1_12:64890804-64891535:+|nuORF 11.640296217721598 0.521594087909532 4 T{I|L} 2 7 26.013 0.0 0.0 2.3446 0.0 0.0 877.3765344972397 0.0 877.3765344972397 0.0 12.201140738196017 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 + T{I|L} 2.3446 + + 37 + 1 1.387 30536.8 1.0 6952 4725 11677 HBL1_DMSO_200M_050219_2,11679 HBL1_DMSO_200M_050219_2,11679,YTNELQETL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11680 62.969 8.7 4615800.0 25 0 492860.0 + 5026 DGWDRTPQI 9 83 544.261965075484 1086.509377217768 2 544.2620727419853 MULTI CID FTMS 0 0 0 11677 6047826.0 0.7535640192732533 1 -0.0343666076660156 3 Unmodified _DGWDRTPQI_ ENSG00000100330|ENST00000401950|MTMR3;ENSG00000108389|ENST00000682306|MTMR4;nc|ENSG00000100330|Q13615-2|MTMR3;nc|ENSG00000100330|Q13615-3|MTMR3;nc|ENSG00000108389|Q9NYA4|MTMR4 47.594388314883695 0.0456443387682827 4 [DG]W{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P 7 5 26.604 0.0 0.0 2.4485 0.0 0.0 0.0 239.1033724420532 239.1033724420532 -1.5840772168160555 0.0 -1.5840772168160555 0.0 0 0.3054621874040891 1.0969100130080565 0.0 0.3494850021680094 [DG]W{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P 2.4485 - 71 + 1 1.387 38598.3 1.0 6953 4725 11677 HBL1_DMSO_200M_050219_2,11680 HBL1_DMSO_200M_050219_2,11680,DGWDRTPQI True True DGWDRTPQI 62.96946 544.262072741985 165636208.0 11677.0 ENSG00000100330|ENST00000401950|MTMR3;;nc|ENSG00000100330|Q13615-3|MTMR3;;nc|ENSG00000108389|Q9NYA4|MTMR4;;nc|ENSG00000100330|Q13615-2|MTMR3;;ENSG00000108389|ENST00000682306|MTMR4 6.351566155751546 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11681 62.971 10.0 6134000.0 25 0 613780.0 + 4182 DAPIVAHL 8 70 418.2371563175401 834.4597597018802 2 418.2372314333916 MULTI CID FTMS 0 0 0 11677 5511825.0 1.0 0 0.0 4 Unmodified _DAPIVAHL_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 30.19836241096484 0.408853459428176 4 {[DA]|[EG]}P{I|L}VAH{I|L} 8 0 + 60.839 0.0 0.0 7.2908 7.2908 95.578 0.0 0.0 0.0 32.422750325201406 9.843458313178353 9.843458313178353 60.8391254042489 0 0.3494850021680094 2.0 0.0 0.0 + + {[DA]|[EG]}P{I|L}VAH{I|L} 7.2908 + + 69 + 1 1.387 54488.9 1.0 6954 4725 11677 HBL1_DMSO_200M_050219_2,11681 HBL1_DMSO_200M_050219_2,11681,DAPIVAHL False True DAPIVAHL 62.970639 418.237231433392 85346896.0 11677.0 nc|ENSG00000110090|P50416-2|CPT1A;;ENSG00000110090|ENST00000265641|CPT1A 7.192672411600749 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11682 62.972 8.8 5627800.0 25 0 875430.0 + 11339 GFHLYILGA 9 51 495.772741823778 989.530930714356 2 495.7728454470634 MULTI CID FTMS 0 0 0 11677 5414593.5 0.2329333505067358 -3 0.3358230590820312 5 Unmodified _GFHLYILGA_ REV__ENSG00000139637|ENST00000267103|MYG1;REV__ENST00000551131.1_1_12:53693918-53696986:+|nuORF;REV__ENST00000551670.1_1_12:53693536-53696986:+|nuORF;REV__nc|ENSG00000139637|Q9HB07|MYG1 20.871210003555333 0.2717241269066626 4 Q{M(Oxidation (M))|F}{I|L}Q 4 -1 37.423 0.0 0.0 3.7819 0.0 0.0 455.2492356153881 0.0 455.2492356153881 0.0 22.81865655543953 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 Q{M(Oxidation (M))|F}{I|L}Q 3.7819 - 54 1 1.387 43707.9 1.0 6955 4725 11677 HBL1_DMSO_200M_050219_2,11682 HBL1_DMSO_200M_050219_2,11682,GFHLYILGA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11683 62.973 20.0 1763700.0 25 0 179480.0 + 18283 KVIGGDDLSTL 11 67 559.3084957675447 1116.6024386018894 2 559.3085204958916 MULTI CID FTMS 0 0 0 11677 2725005.25 0.8465415040637021 -1 0.1398086547851562 6 Unmodified _KVIGGDDLSTL_ ENSG00000165704|ENST00000298556|HPRT1 35.61225514009592 0.279986979807413 4 D{I|L}ST{I|L} 5 6 49.993 0.0 0.0 4.4772 0.0 0.0 569.3187123029312 0.0 569.3187123029312 0.0 40.52887198244136 0.0 0.0 0 0.8807196863200843 0.0 0.9247425010840048 0.0 + D{I|L}ST{I|L} 4.4772 + + 116 1 1.387 37488.1 1.0 6956 4725 11677 HBL1_DMSO_200M_050219_2,11683 HBL1_DMSO_200M_050219_2,11683,KVIGGDDLSTL False True KVIGGDDLSTL 62.972997 559.308520495892 47617332.0 11677.0 ENSG00000165704|ENST00000298556|HPRT1 6.051279385884603 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11684 62.974 15.0 3087700.0 25 0 314830.0 + 26667 NYIEGTKML 9 78 534.7723036613658 1067.5300543895314 2 534.7734252810478 MULTI CID FTMS 0 0 0 11677 2575523.5 0.4516711460706591 -2 0.2831268310546875 7 Unmodified _NYIEGTKML_ ENSG00000133313|ENST00000324262|CNDP2;nc|ENSG00000133313|Q96KP4-2|CNDP2 38.17557092003332 0.0854718145212029 4 [YN]{I|L}EGT 6 3 50.623 0.0 0.0 4.742 0.0 0.0 0.0 387.2092074029906 387.2092074029906 29.66312853471372 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.5 0.0 + [YN]{I|L}EGT 4.742 + + 175 + 1 1.387 45116.4 1.0 6957 4725 11677 HBL1_DMSO_200M_050219_2,11684 HBL1_DMSO_200M_050219_2,11684,NYIEGTKML True True NYIEGTKML 62.974175 534.773425281048 129752928.0 11677.0 ENSG00000133313|ENST00000324262|CNDP2;;nc|ENSG00000133313|Q96KP4-2|CNDP2 5.263723214467366 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11685 62.975 13.0 2332100.0 25 0 150300.0 + 20844 LMDHTIPEV 9 72 527.7677566495488 0 527.7693969607353 PEAK CID FTMS 0 0 0 11677 2523020.0 0.9063011316999926 -2 0.2831268310546875 8 Unmodified _LMDHTIPEV_ ENSG00000137575|ENST00000260130|SDCBP;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP 16.942295170755138 0.2326366549411506 4 Q{I|L} 2 8 9.9485 0.0 0.0 0.94431 0.0 0.0 215.12894484031 594.2380465143186 809.3669913546287 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 Q{I|L} 0.94431 - 38 + 1 1.387 32671.8 1.0 6958 4725 11677 HBL1_DMSO_200M_050219_2,11685 HBL1_DMSO_200M_050219_2,11685,LMDHTIPEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11686 62.977 23.0 2196900.0 25 0 434950.0 + 15027 ILTDITKGV 9 69 480.29262761102257 958.5707022888452 2 480.2929565310478 MULTI CID FTMS 0 0 0 11677 2270327.5 0.4823932218868267 1 -0.0343666076660156 9 Unmodified _ILTDITKGV_ ENSG00000167658|ENST00000309311|EEF2 36.506200033944 0.094635877243972 4 {I|L}{I|L}TD{I|L}TK[VG] 9 0 + 76.934 0.0 0.0 8.0259 8.0259 97.112 0.0 0.0 0.0 51.40015217211733 2.3764301679958777 2.3764301679958777 51.37726867220145 0 0.6861818737241735 2.0 0.5 0.0 + + {I|L}{I|L}TD{I|L}TK[VG];{[ES]|[DT]|[{I|L}C]}{I|L}TKG[{I|L}V]{I|L};{I|L}{I|L}[RP][HQ][VP];[{I|L}T]DTKG[{I|L}V]{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}KTG[{I|L}V]{I|L};[{I|L}T]DKTG[{I|L}V]{I|L};[KT]{NN|[MP]|[D{I|L}]|[EV]}TG[{I|L}V]{I|L};[KT]{NN|[MP]|[D{I|L}]|[EV]}T[R{I|L}]{I|L} 8.0259;2.6661;2.5976;2.4824;1.6201;1.4364;0.60608;0.2443 +;-;-;-;-;-;-;- + 215 + 1 1.387 47832.6 1.0 6959 4725 11677 HBL1_DMSO_200M_050219_2,11686 HBL1_DMSO_200M_050219_2,11686,ILTDITKGV True True ILTDITKGV 62.976533 480.292956531048 59451340.0 11677.0 ENSG00000167658|ENST00000309311|EEF2 4.217394113540649 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11687 62.978 32.0 2075300.0 25 0 340730.0 -1 RLERSIQMLTL 11 62 688.3902087074724 1374.7658644817448 2 688.3914672732353 MULTI CID FTMS 0 0 0 11677 1869515.25 0.8784843343720462 -1 0.1398086547851562 10 Oxidation (M) _RLERSIQM(Oxidation (M))LTL_ ENSG00000099203|ENST00000214869|TMED1 5.296884461304476 0.8501568894076437 4 [{I|L}P]S[{I|L}P]KQT{I|L} 9 -1 38.98 0.0 0.0 2.8354 0.0 0.0 0.0 394.1531995055293 394.1531995055293 18.974856131339173 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.805462187404089 0.0 [{I|L}P]S[{I|L}P]KQT{I|L} 2.8354 - 187 1 1.387 53864.3 1.0 6960 4725 11677 HBL1_DMSO_200M_050219_2,11687 HBL1_DMSO_200M_050219_2,11687,RLERSIQMLTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11688 62.979 27.0 1775700.0 25 0 121430.0 + 20966 LNLDVAWSR 9 83 537.2904004915296 1072.566248049859 2 537.2900878787041 MULTI CID FTMS 0 0 0 11677 1574740.75 0.6650967447446331 -3 0.3358230590820312 11 Unmodified _LNLDVAWSR_ REV__ENSG00000154760|ENST00000285013|SLFN13;REV__ENSG00000172716|ENST00000685675|SLFN11;REV__nc|ENSG00000154760|Q68D06-2|SLFN13 10.073929032068715 0.563993802247229 4 E{I|L}YSV 5 -1 23.928 0.0 0.0 2.2309 0.0 0.0 230.13504795395903 248.10465078995617 478.2396987439152 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E{I|L}YSV 2.2309 - 124 + 1 1.387 45575.3 1.0 6961 4725 11677 HBL1_DMSO_200M_050219_2,11688 HBL1_DMSO_200M_050219_2,11688,LNLDVAWSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11689 62.98 45.0 1536300.0 25 0 333660.0 29714 QPLAAIAP 8 81 390.7334489692679 779.4523450053358 2 390.7330505251884 MULTI CID FTMS 0 0 0 11677 1412914.625 1.0 0 0.0 12 Unmodified _QPLAAIAP_ ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:32002284-32014401:+|nuORF;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-5|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1 0.7936320650641473 0.8195151834710337 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.387 61307.7 1.0 6962 4725 11677 HBL1_DMSO_200M_050219_2,11689 HBL1_DMSO_200M_050219_2,11689,QPLAAIAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11690 62.981 40.0 1151400.0 25 0 138590.0 + 23776 LVCGTLSGATL 11 67 517.7811079442343 1033.5476629552686 2 517.7827026247978 MULTI CID FTMS 0 0 0 11677 1033590.75 1.0 0 0.0 13 Unmodified _LVCGTLSGATL_ ENST00000306910.8_1_19:58929280-58929493:+|nuORF 13.042465956692816 0.7638483625850725 4 {I|L} 1 10 18.852 0.0 0.0 1.824 0.0 0.0 902.4528886406188 0.0 902.4528886406188 0.0 11.861818737241734 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L} 1.824 + + 32 + 1 1.387 42243.8 1.0 6963 4725 11677 HBL1_DMSO_200M_050219_2,11690 HBL1_DMSO_200M_050219_2,11690,LVCGTLSGATL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11691 62.983 69.0 875920.0 25 0 76017.0 40380 VIAGTALASV 10 96 451.2717425544446 900.5289321756892 2 451.2722961306572 MULTI CID FTMS 0 0 0 11677 1070842.875 0.4383815228030731 1 -0.0343666076660156 14 Unmodified _VIAGTALASV_ ENSG00000089060|ENST00000680972|SLC8B1;ENST00000553238.5_1_12:113745708-113770716:-|nuORF;nc|ENSG00000089060|Q6J4K2-2|SLC8B1 36.12702656103203 0.1984647928738587 4 [VS]A{I|L}AA{I|L}ASV 10 3 + 56.604 0.0 0.0 6.2856 6.2856 81.164 0.0 0.0 0.0 10.791812460476253 10.452490459521968 10.452490459521968 4.490925311194189 0 1.1989700043360187 1.3010299956639813 0.0 0.0 [VS]A{I|L}AA{I|L}ASV;[VS]AVR{I|L}ASV;{[SA]|[TG]}V{I|L}AA{I|L}ASV;[VS]AV[VG]{I|L}ASV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}AA{I|L}ASV;{[SA]|[TG]}VVR{I|L}ASV;[VS]A{I|L}[RV]ASV;[VS][RV]A{I|L}ASV;[VS]A{I|L}GVVASV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VR{I|L}ASV 6.2856;5.7869;5.0872;4.7644;4.6454;4.5886;4.4809;4.4809;4.4301;4.1526 -;-;-;-;-;-;-;-;-;- 570 1 1.387 52147.5 1.0 6964 4725 11677 HBL1_DMSO_200M_050219_2,11691 HBL1_DMSO_200M_050219_2,11691,VIAGTALASV False True KVEGVLASV 62.982945 451.272296130657 15461113.0 11677.0 nc|ENSG00000139697|A3KN83-3|SBNO1;;ENSG00000139697|ENST00000602398|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1 -0.3940223852793376 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11692 62.984 42.0 915520.0 25 0 114560.0 -1 0 49 603.9677535467044 1808.8814312403133 3 604.3016235232353 MULTI CID FTMS 0 0 0 11677 1032646.0625 0.3560230975454947 -6 0.6435890197753906 15 4 {I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YN]G{M(Oxidation (M))|F}{I|L}H[Q{I|L}] 11 -1 29.252 0.0 0.0 1.6171 0.0 0.0 461.23637587715 0.0 461.23637587715 0.0 6.420916726225951 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YN]G{M(Oxidation (M))|F}{I|L}H[Q{I|L}] 1.6171 - 67 1 1.387 36778.6 1.0 6965 4725 11677 HBL1_DMSO_200M_050219_2,11692 HBL1_DMSO_200M_050219_2,11692, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11693 62.985 48.0 1152700.0 25 0 172540.0 + 19709 LGMGVALGPV 10 87 457.26420380462406 912.513854676048 2 457.2640869021416 MULTI CID FTMS 0 0 0 11677 995028.6875 0.7946810515763082 1 -0.0343666076660156 16 Unmodified _LGMGVALGPV_ REV__ENSG00000171227|ENST00000306406|TMEM37;REV__ENST00000465296.1_1_2:120189667-120195013:+|nuORF 12.531546534597751 0.6372748319968624 4 V 1 -1 11.594 0.0 0.0 1.2705 0.0 0.0 795.4342704859099 0.0 795.4342704859099 0.0 1.9160837592566529 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2705 + + 32 + 1 1.387 48859.0 1.0 6966 4725 11677 HBL1_DMSO_200M_050219_2,11693 HBL1_DMSO_200M_050219_2,11693,LGMGVALGPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11694 62.987 59.0 847550.0 25 0 78760.0 25026 MPRIVNVT 8 88 465.2647565667504 928.5149602003008 2 465.2657043337822 MULTI CID FTMS 0 0 0 11677 926892.0 0.4602108043350504 3 -0.2311859130859375 17 Unmodified _MPRIVNVT_ ENSG00000174197|ENST00000703841|MGA;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA 15.847184025352805 0.6768015514314958 4 MP{I|L}{M(Oxidation (M))|F} 4 5 31.446 0.0 0.0 3.3867 0.0 0.0 0.0 437.2353914850219 437.2353914850219 8.386313713333635 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 MP{I|L}{M(Oxidation (M))|F} 3.3867 - 82 + 1 1.387 45267.3 1.0 6967 4725 11677 HBL1_DMSO_200M_050219_2,11694 HBL1_DMSO_200M_050219_2,11694,MPRIVNVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11695 62.989 113.0 609950.0 25 0 58363.0 + 25375 NAYKTPLL 8 116 460.2651408082716 918.5157286833432 2 460.2659789919853 MULTI CID FTMS 0 0 0 11677 851143.125 1.0 0 0.0 18 Unmodified _NAYKTPLL_ ENSG00000150990|ENST00000308736|DHX37;ENST00000542400.5_1_12:125435197-125437195:-|nuORF 54.773552608820026 0.1167943196628344 4 {[QG]|[NA]}YKTP{I|L}{I|L} 8 0 + 69.435 0.0 0.0 7.5595 7.5595 95.648 0.0 0.0 0.0 54.7644869772622 14.024174299985006 14.024174299985006 35.5866814795592 0 1.110924374808178 2.0 0.2742275032520141 0.0 + + {[QG]|[NA]}YKTP{I|L}{I|L};[KA]YNTP{I|L}{I|L};[{I|L}P][KC]{M(Oxidation (M))|F}RR;[YK]APERR;{[TV]|[{I|L}S]}[Q{I|L}]{M(Oxidation (M))|F}RR 7.5595;3.6851;0.68125;0.58768;0.56243 +;-;-;-;- + 188 + 1 1.387 57031.5 1.0 6968 4725 11677 HBL1_DMSO_200M_050219_2,11695 HBL1_DMSO_200M_050219_2,11695,NAYKTPLL True True NAYKTPLL 62.989237 460.265978991985 5850770.0 11677.0 ENSG00000150990|ENST00000308736|DHX37;;ENST00000542400.5_1_12:125435197-125437195:-|nuORF 6.189786593119304 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11696 62.992 126.0 738420.0 25 0 92042.0 + 27858 PLRPGGDR 8 107 434.2430100092095 866.471467085219 2 434.2435180544853 MULTI CID FTMS 0 0 0 11677 703601.75 0.7117854588262638 2 -0.1343116760253906 19 Unmodified _PLRPGGDR_ REV__ENSG00000135835|ENST00000367588|KIAA1614 9.347437153973935 0.7675937258251505 4 {I|L} 1 -1 9.1487 0.0 0.0 1.0559 0.0 0.0 735.3763113008425 0.0 735.3763113008425 0.0 0.0579093627490756 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0559 + + 28 + 1 1.387 77186.5 1.0 6969 4725 11677 HBL1_DMSO_200M_050219_2,11696 HBL1_DMSO_200M_050219_2,11696,PLRPGGDR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11697 62.997 303.0 533920.0 25 0 68697.0 19881 LHPSSYIFSF 10 129 599.2983386050089 1196.5821242768177 2 599.2982665896416 MULTI CID FTMS 0 0 0 11677 616082.625 0.4126413575955344 1 -0.0343666076660156 20 Unmodified _LHPSSYIFSF_ ENST00000477883.1_1_1:47051569-47051692:-|nuORF 26.88365393820708 0.3646707531412818 4 AYS{M(Oxidation (M))|F}SRK{I|L} 8 9 59.489 0.0 0.0 4.9715 0.0 0.0 226.0576641103567 0.0 226.0576641103567 0.0 37.348597324228656 0.0 0.0 0 2.048014819696125 0.0 0.3807196863200844 0.4247425010840047 AYS{M(Oxidation (M))|F}SRK{I|L} 4.9715 - 422 + 1 1.387 123727.1 1.0 6970 4725 11677 HBL1_DMSO_200M_050219_2,11697 HBL1_DMSO_200M_050219_2,11697,LHPSSYIFSF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11699 63.001 15.0 2929500.0 25 0 619800.0 + 39243 VAAFAALT 8 69 382.2201799290117 762.4258069248234 2 382.2197143435478 MULTI CID FTMS 0 0 0 11698 4008313.75 1.0 0 0.0 1 Unmodified _VAAFAALT_ REV__ENSG00000117600|ENST00000370185|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-3|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5|PLPPR4 0.0 0.8243325171867699 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.387 42118.2 1.0 6971 4726 11698 HBL1_DMSO_200M_050219_2,11699 HBL1_DMSO_200M_050219_2,11699,VAAFAALT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11700 63.008 367.0 555380.0 25 0 64571.0 + 41624 VPPPLAKAI 9 146 453.2945236289187 904.5744943246374 2 453.2939941287041 MULTI CID FTMS 0 0 0 11698 367754.1875 0.2710197762960806 9 -0.7825164794921875 2 Unmodified _VPPPLAKAI_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;ENST00000588913.5_1_19:10244345-10246231:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 34.10243960390752 0.1078313939113124 4 VPP[{I|L}P]AKA{I|L} 9 0 + 58.22 0.0 0.0 6.4362 6.4362 83.509 0.0 0.0 0.0 31.473191085348404 6.832750158094996 6.832750158094996 6.020599913279625 0 0.5189301784845296 2.0 0.0 0.0 + + VPP[{I|L}P]AKA{I|L};VP{I|L}{[HG]|PP}AKA{I|L};V{I|L}P{[HG]|PP}AKA{I|L};V{I|L}[YK]AKA{I|L} 6.4362;5.7706;2.4245;2.3739 +;-;-;- + 579 + 1 1.387 156590.8 1.0 6972 4726 11698 HBL1_DMSO_200M_050219_2,11700 HBL1_DMSO_200M_050219_2,11700,VPPPLAKAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11701 63.009 43.0 1595800.0 25 0 323910.0 + 30102 QVHPSLVQP 9 85 502.7795519614126 1003.5445509896252 2 502.7787963747978 MULTI CID FTMS 0 0 0 11698 1503432.75 1.0 0 0.0 3 Unmodified _QVHPSLVQP_ REV__ENST00000467201.5_1_7:100174858-100176198:-|nuORF 24.020572477871973 0.2255576514309169 4 {[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}V 8 -1 + 48.161 0.0 0.0 4.7991 4.7991 82.133 0.0 0.0 0.0 22.134928107446186 10.657205584423366 10.657205584423366 10.657205584423366 0 0.4247425010840047 2.0 1.1237125054200234 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}[R{M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}[WR]P[YR];[H{I|L}]SPN{I|L}PQV;[KA][WY]{I|L}PQV;[H{I|L}]SP[QP]VQV;[H{I|L}]SPGG{I|L}PQV;[R{M(Oxidation (M))|F}]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}VQV;[R{M(Oxidation (M))|F}]{I|L}[WR]QV 4.7991;3.7371;2.6994;1.9303;1.3851;1.2338;1.0127;0.67779;0.039075 -;-;-;-;-;-;-;-;- 127 + 1 1.387 59905.6 1.0 6973 4726 11698 HBL1_DMSO_200M_050219_2,11701 HBL1_DMSO_200M_050219_2,11701,QVHPSLVQP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11702 63.014 241.0 760240.0 25 0 133080.0 + 39089 TVYTDFDGTRV 11 92 637.3055731232843 1272.5965933133684 2 637.3058959841728 MULTI CID FTMS 0 0 0 11698 953266.1875 0.8233481305316076 -2 0.1741752624511718 4 Unmodified _TVYTDFDGTRV_ ENSG00000137193|ENST00000373509|PIM1;ENSG00000198355|ENST00000360612|PIM3;nc|ENSG00000137193|P11309-2|PIM1 46.4752305370441 0.1371501875038488 4 TVYTD{M(Oxidation (M))|F}DGT[RV] 11 0 + 91.802 0.0 0.0 7.2138 7.2138 79.111 0.0 0.0 0.0 22.07381083653499 1.536535720461643 1.536535720461643 1.536535720461643 0 0.805462187404089 2.0 0.805462187404089 0.2742275032520141 + + TVYTD{M(Oxidation (M))|F}DGT[RV];TVYTD{M(Oxidation (M))|F}DV[WK];TVYTDV[KS]D[{M(Oxidation (M))|F}V];TVYVTD[KS]D[{M(Oxidation (M))|F}V];TVYTVD[KS]D[{M(Oxidation (M))|F}V];TVVYTD[KS]D[{M(Oxidation (M))|F}V];TVYTD{M(Oxidation (M))|F}[Q{I|L}]{[WT]|[RM]};TVVYT[WC(Carbamidomethyl (C))]V[{M(Oxidation (M))|F}V];TVYTDVY[KG]{NN|[MP]|[D{I|L}]|[EV]};TVYTD{M(Oxidation (M))|F}[Q{I|L}]A{[ES]|[DT]|[{I|L}C]} 7.2138;7.0931;6.6444;6.4705;6.4079;6.1714;5.794;5.7138;5.6231;5.5608 +;-;-;-;-;-;-;-;-;- + 1218 + 1 1.387 134936.0 1.0 6974 4726 11698 HBL1_DMSO_200M_050219_2,11702 HBL1_DMSO_200M_050219_2,11702,TVYTDFDGTRV False True TVYTDFDGTRV 63.013781 637.305895984173 22245446.0 11698.0 ENSG00000198355|ENST00000360612|PIM3;;nc|ENSG00000137193|P11309-2|PIM1;;ENSG00000137193|ENST00000373509|PIM1 5.943254788716634 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11703 63.015 71.0 1631600.0 25 0 277880.0 + 28600 PVALAAEVL 9 130 441.7683182352048 881.5220835372097 2 441.7678100466728 MULTI CID FTMS 0 0 0 11698 661566.3125 0.7422963269131324 22 -2.1133346557617188 5 Unmodified _PVALAAEVL_ REV__ENSG00000108479|ENST00000588479|GALK1;REV__ENST00000586733.1_1_17:73754139-73754584:-|nuORF 24.67388899826682 0.2172451872415813 4 VKSTQ{I|L}GV 8 -1 38.798 0.0 0.0 4.4012 0.0 0.0 0.0 66.03580652408436 66.03580652408436 7.939812291623554 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 VKSTQ{I|L}GV 4.4012 - 2524 + 1 1.387 95091.3 1.0 6975 4726 11698 HBL1_DMSO_200M_050219_2,11703 HBL1_DMSO_200M_050219_2,11703,PVALAAEVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11704 63.017 15.0 2194600.0 25 0 156360.0 36857 TELSLRHVV 9 74 527.304638987254 1052.5947250413078 2 527.3057128787041 MULTI CID FTMS 0 0 0 11698 631489.5 0.4530207760826878 2 -0.1968193054199218 6 Unmodified _TELSLRHVV_ CON__O76009;CON__Q15323 8.593279151180031 0.6146971463335029 4 VV 2 7 17.078 0.0 0.0 1.6225 0.0 0.0 836.4466212588844 0.0 836.4466212588844 0.0 1.1362189075153122 0.0 0.0 0 0.0 0.0 0.0 0.0 + VV 1.6225 + + 199 + 1 1.387 33089.7 1.0 6976 4726 11698 HBL1_DMSO_200M_050219_2,11704 HBL1_DMSO_200M_050219_2,11704,TELSLRHVV False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 11705 63.022 318.0 412650.0 25 0 34031.0 + 38965 TVPKPDVVVQV 11 121 590.8507148417667 1179.686876750333 2 590.8508178591728 MULTI CID FTMS 0 0 0 11698 555867.6875 0.6308355538885629 -2 0.1741752624511718 7 Unmodified _TVPKPDVVVQV_ ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1 61.08992128646608 0.0647217981198246 4 {[TV]|[{I|L}S]}[WK]VVGVEV 10 5 43.21 0.0 0.0 3.6628 0.0 0.0 0.0 80.01500116519765 80.01500116519765 -4.1783569021604094 0.0 -4.1783569021604094 0.0 0 0.3494850021680094 2.0 0.0 0.3807196863200844 {[TV]|[{I|L}S]}[WK]VVGVEV 3.6628 - 2952 + 1 1.387 107034.5 1.0 6977 4726 11698 HBL1_DMSO_200M_050219_2,11705 HBL1_DMSO_200M_050219_2,11705,TVPKPDVVVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11706 63.025 115.0 359820.0 25 0 34463.0 + 24030 LVYQEPIPTA 10 76 565.8078832127687 1129.6012134923374 2 565.8077270388603 MULTI CID FTMS 0 0 0 11698 542373.5 1.0 0 0.0 8 Unmodified _LVYQEPIPTA_ ENSG00000106588|ENST00000223321|PSMA2;ENST00000411875.1_1_7:42961455-42966220:-|nuORF;ENST00000433579.1_1_7:42952135-42964395:-|nuORF 26.268140514670165 0.3785003716575977 4 [TP]AT[YV]P{I|L} 8 9 34.503 0.0 0.0 3.0545 0.0 0.0 0.0 284.12895942423114 284.12895942423114 11.571654903131533 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.2134679910804404 0.0 [TP]AT[YV]P{I|L} 3.0545 - 183 1 1.387 41039.6 1.0 6978 4726 11698 HBL1_DMSO_200M_050219_2,11706 HBL1_DMSO_200M_050219_2,11706,LVYQEPIPTA False True LVYQEPIPTA 63.024837 565.80772703886 3905726.75 11698.0 ENST00000433579.1_1_7:42952135-42964395:-|nuORF;;ENSG00000106588|ENST00000223321|PSMA2;;ENST00000411875.1_1_7:42961455-42966220:-|nuORF 5.950333754221599 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11707 63.031 352.0 467720.0 25 0 82709.0 + 16142 ITVEDSDKQLL 11 160 630.8384219997733 1259.6622910663466 2 630.8381835818291 MULTI CID FTMS 0 0 0 11698 463538.3125 1.0 0 0.0 9 Unmodified _ITVEDSDKQLL_ ENSG00000162129|ENST00000538039|CLPB;ENST00000538021.5_2_11:72004413-72018253:-|nuORF;nc|ENSG00000162129|Q9H078-3|CLPB;nc|ENSG00000162129|Q9H078-4|CLPB;nc|ENSG00000162129|Q9H078-5|CLPB;nc|ENSG00000162129|Q9H078|CLPB 87.12335221954112 0.0023590323766729 4 {I|L}TVEDSDKQ{I|L}{I|L} 11 0 + 102.52 0.0 0.0 8.1384 8.1384 91.068 0.0 0.0 0.0 37.2623254026237 20.62860787246612 20.62860787246612 9.128498242810991 0 2.0994850021680094 2.0 0.7742275032520141 0.6549471895720984 + + {I|L}TVEDSDKQ{I|L}{I|L};{I|L}TVEDSDK[AG]{I|L}{I|L};[{I|L}T]{[QG]|[NA]}[TA]DD{I|L}T{I|L}{I|L};[{I|L}T]{[QG]|[NA]}[TA]DEVT{I|L}{I|L};[{I|L}T]{[QG]|[NA]}[TA]DDT{I|L}{I|L}{I|L};[{I|L}T][NG][VS]DD{I|L}T{I|L}{I|L};[{I|L}T]{[QG]|[NA]}[TA]DES{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{[ET]|[MV]}{I|L}D{I|L}T{I|L}{I|L};[{I|L}T][NG][VS]DEVT{I|L}{I|L};{I|L}TVE{[MG]|[TS]}M{I|L}AA[QP] 8.1384;7.4137;6.0279;5.8689;5.7368;5.6512;5.5778;5.5167;5.4922;5.4204 +;-;-;-;-;-;-;-;-;- + 9316 + 1 1.387 131952.7 1.0 6979 4726 11698 HBL1_DMSO_200M_050219_2,11707 HBL1_DMSO_200M_050219_2,11707,ITVEDSDKQLL True True ITVEDSDKQLL 63.031204 630.838183581829 5684455.5 11698.0 ENSG00000162129|ENST00000538039|CLPB;;nc|ENSG00000162129|Q9H078-4|CLPB;;nc|ENSG00000162129|Q9H078-3|CLPB;;nc|ENSG00000162129|Q9H078-5|CLPB;;nc|ENSG00000162129|Q9H078|CLPB;;ENST00000538021.5_2_11:72004413-72018253:-|nuORF 6.432931900024414 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11708 63.039 429.0 473440.0 25 0 40555.0 + + 40371 YPPEAPEL 8 112 915.4574049946376 914.4501285280376 1 915.4500610232352 MULTI CID FTMS 0 0 0 11698 399098.6875 0.1740187675781171 5 -0.4236106872558594 10 Unmodified _VHYSAPEL_ nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8;ENSG00000153339|ENST00000283351|TRAPPC8 30.22481116460888 0.4082965392918993 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TPAPAQA 9 -1 + 52.781 0.0 0.0 5.7719 5.7719 84.769 0.0 0.0 0.0 12.547312943772653 13.35753016653129 12.547312943772653 9.208187539523747 0 0.4247425010840047 1.6989700043360187 0.7544321917401079 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TPAPAQA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TPAPA[AG]A;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T[HK]AQA;YP[RH]T{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[EP]A[EP]{I|L};[EP]{I|L}AC{I|L}AQA;YP[VP]PT{[QN]|[E{I|L}]|[KN]};[EP]{I|L}{M(Oxidation (M))|F}A[EP]{I|L};[EP]A{I|L}C{I|L}AQA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T[HK]A[AG]A 5.7719;4.7649;4.5998;4.0412;4.0383;3.8109;3.7546;3.6798;3.6183;3.5869 -;-;-;-;-;-;-;-;-;- 2472 1 1.387 134255.9 1.0 6980 4726 11698 HBL1_DMSO_200M_050219_2,11708 HBL1_DMSO_200M_050219_2,11708,VHYSAPEL False False YPPEAPEL 63.03887 915.450061023235 2280183.25 11698.0 nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8;;ENSG00000153339|ENST00000283351|TRAPPC8 6.027294953664144 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11709 63.046 383.0 681140.0 25 0 50926.0 + 13094 HEIYDLSY 8 179 520.2412590623732 1038.4679651915462 2 520.2416259646416 MULTI CID FTMS 0 0 0 11698 349445.71875 0.9863690740080484 -1 0.0343666076660156 11 Unmodified _HEIYDLSY_ REV__nc|ENSG00000260565|Q9NX77|ERVK13-1 24.67388899826682 0.525179942228231 4 {I|L}SPK{I|L}Y 6 -1 25.61 0.0 0.0 2.4662 0.0 0.0 319.05464839642747 0.0 319.05464839642747 0.0 -3.2564341674107347 -3.2564341674107347 0.0 0 0.0 0.0 0.0 0.0 {I|L}SPK{I|L}Y 2.4662 - 2347 + 1 1.387 202853.3 1.0 6981 4726 11698 HBL1_DMSO_200M_050219_2,11709 HBL1_DMSO_200M_050219_2,11709,HEIYDLSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11710 63.053 384.0 258200.0 25 0 15602.0 + 42236 VSLKVQLVPI 10 148 548.3603789193726 1094.706204905545 2 548.3604614138603 MULTI CID FTMS 0 0 0 11698 340892.4375 0.5485898622480252 -2 0.1741752624511718 12 Unmodified _VSLKVQLVPI_ REV__ENSG00000197256|ENST00000586659|KANK2;REV__ENST00000590400.1_1_19:11303345-11305238:-|nuORF;REV__nc|ENSG00000197256|Q63ZY3-2|KANK2;REV__nc|ENSG00000197256|Q63ZY3-3|KANK2 6.723162845929126 0.6955379296933136 4 H{I|L}[Y{I|L}]NH{I|L} 7 -1 21.419 0.0 0.0 1.9566 0.0 0.0 186.21543429304543 0.0 186.21543429304543 0.0 6.842398049520691 0.0 0.0 0 0.0 0.0 0.0 1.048455006504028 H{I|L}[Y{I|L}]NH{I|L} 1.9566 - 1988 + 1 1.387 80313.4 1.0 6982 4726 11698 HBL1_DMSO_200M_050219_2,11710 HBL1_DMSO_200M_050219_2,11710,VSLKVQLVPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11711 63.06 398.0 278850.0 25 0 21611.0 + 18470 KYIQEAEML 9 137 562.7869684228795 0 562.7866699099541 PEAK CID FTMS 0 0 0 11698 318547.96875 1.0 0 0.0 13 Unmodified _KYIQEAEML_ ENSG00000101138|ENST00000217109|CSTF1 41.8396318013385 0.053988301646488 4 E{I|L}AYSP 6 7 22.472 0.0 0.0 2.0001 0.0 0.0 332.14167258619005 128.07227502994377 460.21394761613385 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 E{I|L}AYSP 2.0001 - 332 + 1 1.387 89351.4 1.0 6983 4726 11698 HBL1_DMSO_200M_050219_2,11711 HBL1_DMSO_200M_050219_2,11711,KYIQEAEML True True KYIQEAEML 63.059776 562.786669909954 2250661.75 11698.0 ENSG00000101138|ENST00000217109|CSTF1 4.83277686436971 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11712 63.068 413.0 461170.0 25 0 65981.0 + 32079 RVLPPSALQSV 11 126 583.8482282329863 1165.6819035327726 2 583.8485595583916 MULTI CID FTMS 0 0 0 11698 281834.875 0.4987687727180873 4 -0.3351211547851562 14 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 88.36371040165146 0.0014365852967226 4 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 78.479 0.0 0.0 6.7324 6.7324 87.39 0.0 0.0 0.0 13.080923170097831 46.92805799712031 13.080923170097831 9.128498242810991 0 1.6307196863200843 0.9208187539523752 1.274227503252014 0.0 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;{[TV]|[{I|L}S]}[HK][{I|L}A]A{I|L}QSV;[VP][R{I|L}][PS]A{I|L}QSV;[PS][RP][{I|L}V]A{I|L}QSV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV;[RV]{I|L}P[PS]RRW;[PS][PA]{I|L}[RV]{I|L}QSV;[VP][WK][{I|L}P]{I|L}QSV 6.7324;5.9493;3.9569;3.8579;3.7309;3.7193;3.1707;2.8855;2.6692;2.2122 +;-;-;-;-;-;-;-;-;- + 550 1 1.387 146382.2 1.0 6984 4726 11698 HBL1_DMSO_200M_050219_2,11712 HBL1_DMSO_200M_050219_2,11712,RVLPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11713 63.077 465.0 393700.0 25 0 29704.0 + 38308 TQIDHYVGI 9 206 523.2686460466331 1044.522739160066 2 522.7997314333916 MULTI CID FTMS 0 0 0 11698 240352.890625 0.0511292853632879 3 -0.2372093200683593 15 Unmodified _TQIDHYVGI_ ENSG00000133318|ENST00000377819|RTN3;nc|ENSG00000133318|O95197-2|RTN3;nc|ENSG00000133318|O95197-3|RTN3;nc|ENSG00000133318|O95197-4|RTN3;nc|ENSG00000133318|O95197-7|RTN3 26.268140514670165 0.1969607489560049 4 {NN|[MP]|[D{I|L}]|[EV]}HYV[KA]T 8 5 28.849 0.0 0.0 2.762 0.0 0.0 0.0 113.99396653727231 113.99396653727231 6.80645977579189 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.8494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}HYV[KA]T 2.762 - 2590 1 1.387 143178.3 1.0 6985 4726 11698 HBL1_DMSO_200M_050219_2,11713 HBL1_DMSO_200M_050219_2,11713,TQIDHYVGI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11714 63.085 482.0 196010.0 25 0 9033.4 + 35539 STPEELGLDKV 11 135 594.3100507770794 1186.6055486209586 2 594.3124267458916 MULTI CID FTMS 0 0 0 11698 181655.9375 1.0 0 0.0 16 Unmodified _STPEELGLDKV_ ENSG00000178741|ENST00000322347|COX5A 39.21299971606389 0.2245192836502623 4 {[MG]|[TS]}PEE{I|L}{[VA]|[{I|L}G]}AATV 12 3 + 42.857 0.0 0.0 3.6117 3.6117 64.449 0.0 0.0 0.0 11.496746844687928 0.5192435809753775 0.5192435809753775 0.9331704325576312 0 0.25 0.0 1.403598431600422 0.0 {[MG]|[TS]}PEE{I|L}{[VA]|[{I|L}G]}AATV;{[MG]|[TS]}PEE{I|L}{[RE]|[WV]}KV;{[MG]|[TS]}PEE{I|L}{[VA]|[{I|L}G]}DKV;{[MG]|[TS]}PEE{I|L}{[VA]|[{I|L}G]}AAS{I|L};{[MG]|[TS]}PEE{I|L}{[VA]|[{I|L}G]}{[TV]|[{I|L}S]}AA;{[MG]|[TS]}PEE{I|L}{[VA]|[{I|L}G]}[QT]{I|L};[EP]E{I|L}{[VA]|[{I|L}G]}DKV{[MG]|[TS]};[EP]E{I|L}{[RE]|[WV]}KV{[MG]|[TS]};{[MG]|[TS]}P[YQ][H{I|L}]DKV;{[MG]|[TS]}P[YK][H{I|L}]DKV 3.6117;3.5331;3.2831;3.0301;2.654;2.2526;2.078;2.0312;0.72733;0.72733 -;-;+;-;-;-;-;-;-;- + 324 + 1 1.387 76479.9 1.0 6986 4726 11698 HBL1_DMSO_200M_050219_2,11714 HBL1_DMSO_200M_050219_2,11714,STPEELGLDKV False True STPEELGLDKV 63.085116 594.312426745892 2144631.0 11698.0 ENSG00000178741|ENST00000322347|COX5A 6.16733964284261 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11715 63.088 136.0 414960.0 25 0 35707.0 15305 IPKPLKQR 8 112 490.32302271083375 0 490.3225890994072 PEAK CID FTMS 0 0 0 11698 213092.59375 1.0 0 0.0 17 Unmodified _IPKPLKQR_ ENSG00000135519|ENST00000257981|KCNH3 9.347437153973935 0.5488964601725408 4 {I|L} 1 7 7.1041 0.0 0.0 0.72592 0.0 0.0 184.12062988525616 678.3897799127561 862.5104097980122 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 + {I|L} 0.72592 + + 57 + 1 1.387 48428.0 1.0 6987 4726 11698 HBL1_DMSO_200M_050219_2,11715 HBL1_DMSO_200M_050219_2,11715,IPKPLKQR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11716 63.097 538.0 197970.0 25 0 55357.0 -1 LPPRRRDEDML 11 87 707.3649158113052 1412.7152786894103 2 707.3652831912041 MULTI CID FTMS 0 0 0 11698 122532.65625 0.6109205825600769 1 -0.099945068359375 18 Oxidation (M) _LPPRRRDEDM(Oxidation (M))L_ ENSG00000084463|ENST00000261167|WBP11 6.2057823575117 0.8458686499021061 4 [VG]G{M(Oxidation (M))|F} 4 -1 17.533 0.0 0.0 1.2411 0.0 0.0 0.0 1049.5128272570591 1049.5128272570591 -0.6279082985945585 0.0 -0.6279082985945585 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VG]G{M(Oxidation (M))|F} 1.2411 - 395 1 1.387 76620.7 1.0 6988 4726 11698 HBL1_DMSO_200M_050219_2,11716 HBL1_DMSO_200M_050219_2,11716,LPPRRRDEDML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11718 63.102 45.0 1115500.0 25 0 158990.0 + 40951 VLVALRDTV 9 70 493.30647369016935 984.5983944471388 2 493.3063232302666 MULTI CID FTMS 0 0 0 11717 892562.375 0.3690723193705906 1 -0.0968742370605468 1 Unmodified _VLVALRDTV_ REV__ENSG00000189350|ENST00000379558|TOGARAM2;REV__nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2 26.88365393820708 0.1891292719743517 4 {I|L}VV 3 -1 48.06 0.0 0.0 4.8811 0.0 0.0 0.0 670.3537691705686 670.3537691705686 29.431890546242343 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}VV 4.8811 - 40 + 1 1.365 45021.3 1.0 6989 4727 11717 HBL1_DMSO_200M_050219_2,11718 HBL1_DMSO_200M_050219_2,11718,VLVALRDTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11719 63.103 51.0 940920.0 25 0 82396.0 + -1 NELSAKMSL 9 78 504.75338894443706 1007.492224955674 2 504.7529479861259 MULTI CID FTMS 0 0 0 11717 798720.4375 0.0183494027786354 6 -0.4897994995117187 2 Oxidation (M) _NELSAKM(Oxidation (M))SL_ REV__CON__P02533;REV__CON__P08779;REV__CON__Q3ZAW8;REV__CON__Q6IFX2;REV__CON__Q9Z2K1;REV__ENSG00000186832|ENST00000301653|KRT16;REV__ENSG00000186847|ENST00000167586|KRT14 14.838274106304384 0.4350285940865338 4 S{I|L} 2 -1 16.186 0.0 0.0 1.6065 0.0 0.0 789.3652240785242 0.0 789.3652240785242 0.0 1.5815315012392972 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 S{I|L} 1.6065 + + 46 + 1 1.365 42971.3 1.0 6990 4727 11717 HBL1_DMSO_200M_050219_2,11719 HBL1_DMSO_200M_050219_2,11719,NELSAKMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11720 63.104 11.0 6604200.0 25 0 948120.0 + -1 VINHNTPGLPKIY 13 63 366.7366575692964 731.4587622053928 2 366.7363159060478 MULTI CID FTMS 0 0 0 11717 5279620.0 0.0958352728666531 -4 0.4174385070800781 3 ENST00000601803.5_1_19:19035694-19035868:+|nuORF;ENSG00000105671|ENST00000247003|DDX49;ENST00000601772.1_1_19:19035054-19035967:+|nuORF 4 [{I|L}V]PK{I|L}Y 6 -1 + 47.452 0.0 0.0 6.4874 6.4874 91.718 0.0 0.0 0.0 32.00196235524295 9.832881222565248 9.832881222565248 24.87334396171555 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK{I|L}Y;[{I|L}V][K{I|L}]PY 6.4874;3.0868 -;- 42 + 1 1.365 64048.6 1.0 6991 4727 11717 HBL1_DMSO_200M_050219_2,11720 HBL1_DMSO_200M_050219_2,11720, False False VINHNTPGLPKIY 63.104232 366.736315906048 812235.625 11717.0 ENST00000601803.5_1_19:19035694-19035868:+|nuORF;;ENSG00000105671|ENST00000247003|DDX49;;ENST00000601772.1_1_19:19035054-19035967:+|nuORF 4.176991780598958 4.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11721 63.106 48.0 1214400.0 25 0 178060.0 + 11115 GEFTIKTV 8 85 447.7502995907714 893.4860462483429 2 447.7503539919853 MULTI CID FTMS 0 0 0 11717 981999.6875 0.2237981584960941 -3 0.2741203308105469 4 Unmodified _GEFTIKTV_ REV__ENSG00000158636|ENST00000695367|EMSY;REV__nc|ENSG00000158636|Q7Z589-4|EMSY;REV__nc|ENSG00000158636|Q7Z589-5|EMSY;REV__nc|ENSG00000158636|Q7Z589-6|EMSY;REV__nc|ENSG00000158636|Q7Z589|EMSY 37.97399986684836 0.2681860861828418 4 {[CT]|[{M(Oxidation (M))|F}G]}ET{I|L}KTV 8 -1 + 43.301 0.0 0.0 4.8463 4.8463 84.327 0.0 0.0 0.0 23.86365606194204 2.089255891668465 2.089255891668465 19.17780549770299 0 0.25 0.0 0.6643943297944485 0.0 {[CT]|[{M(Oxidation (M))|F}G]}ET{I|L}KTV;[R{M(Oxidation (M))|F}]M{I|L}KTV;[K{I|L}]TTV{M(Oxidation (M))|F}{[DA]|[EG]};[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}PKTV;[K{I|L}]TT{M(Oxidation (M))|F}V{[DA]|[EG]};[K{I|L}]S[{I|L}T]{M(Oxidation (M))|F}{[DA]|[EG]};[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}T[KP]V;[K{I|L}]S[YV]V{[DA]|[EG]} 4.8463;2.6999;2.615;2.3629;2.2781;0.69856;0.44151;0.36164 -;-;-;-;-;-;-;- 146 + 1 1.365 51918.1 1.0 6992 4727 11717 HBL1_DMSO_200M_050219_2,11721 HBL1_DMSO_200M_050219_2,11721,GEFTIKTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11722 63.108 135.0 724400.0 25 0 88955.0 + 22479 LPVNAQNYV 9 143 509.2710193652375 1016.527485797275 2 509.2726013064384 MULTI CID FTMS 0 0 0 11717 608068.9375 0.0350261731919327 -6 0.6165885925292969 5 Unmodified _LPVNAQNYV_ ENSG00000035687|ENST00000366535|ADSS2 44.40701690623563 0.0526327925666318 4 [VP]N{I|L}AQN[YV] 9 2 + 44.477 0.0 0.0 4.3754 4.3754 72.229 0.0 0.0 0.0 4.823705116962813 25.15749037596876 4.823705116962813 3.624081626175183 0 0.3054621874040891 0.5686362358410126 0.0 0.6861818737241735 [VP]N{I|L}AQN[YV];[VP]NA{I|L}QN[YV];[{I|L}P]{[NV]|[RG]}AQN[YV];[VP]N{I|L}AQGG[YV];[VP]N{I|L}A[AG]N[YV];[VG][PG]{I|L}AQN[YV];[{I|L}P][NG]{I|L}QN[YV];[VP]GG{I|L}AQN[YV];[VP]NA{I|L}QGG[YV];[VP]NA{I|L}[AG]N[YV] 4.3754;4.0188;3.6374;3.4695;3.4695;3.3642;3.2809;3.169;3.113;3.113 -;-;+;-;-;-;-;-;-;- + 1459 1 1.365 78221.9 1.0 6993 4727 11717 HBL1_DMSO_200M_050219_2,11722 HBL1_DMSO_200M_050219_2,11722,LPVNAQNYV True True LPVNAQNYV 63.108236 509.272601306438 142829904.0 11717.0 ENSG00000035687|ENST00000366535|ADSS2 2.6650487581888838 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11723 63.114 310.0 497320.0 25 0 48838.0 + 17866 KQLEETNLQL 10 139 608.3331731696034 1214.6517934060066 2 608.3339721560478 MULTI CID FTMS 0 0 0 11717 546403.5625 0.3958614222373559 -2 0.1343116760253906 6 Unmodified _KQLEETNLQL_ ENSG00000083535|ENST00000326291|PIBF1;nc|ENSG00000083535|Q8WXW3-4|PIBF1 114.20165948288296 0.0011420412450596 4 [AG]{I|L}KEETN{I|L}Q{I|L} 11 3 + 113.18 0.0 0.0 9.3183 9.3183 82.431 0.0 0.0 0.0 2.4506556484337523 16.57577319177794 2.4506556484337523 1.3541636047725518 0 0.6861818737241735 1.6989700043360187 1.5669015600442575 1.8494850021680087 [AG]{I|L}KEETN{I|L}Q{I|L};[AG]{I|L}TVGETN{I|L}Q{I|L};[Q{I|L}]TVGETN{I|L}Q{I|L};[Q{I|L}]KEETN{I|L}Q{I|L};[AG]K{I|L}EETN{I|L}Q{I|L};[AG]{I|L}KEETGG{I|L}Q{I|L};[AG]{I|L}KEETN{I|L}[AG]{I|L};[AG]{I|L}EKETN{I|L}Q{I|L};[AG]{I|L}S{I|L}GETN{I|L}Q{I|L};[AG]{I|L}TVGETN{I|L}[AG]{I|L} 9.3183;9.2068;9.1165;9.0252;8.8125;8.5668;8.5668;8.5549;8.5006;8.4578 -;-;-;-;-;-;-;-;-;- 12632 1 1.365 116726.9 1.0 6994 4727 11717 HBL1_DMSO_200M_050219_2,11723 HBL1_DMSO_200M_050219_2,11723,KQLEETNLQL True True KQLEETNLQL 63.113907 608.333972156048 22362558.0 11717.0 nc|ENSG00000083535|Q8WXW3-4|PIBF1;;ENSG00000083535|ENST00000326291|PIBF1 6.165008703867595 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11724 63.121 422.0 590670.0 25 0 45550.0 + 41525 VPNPRIKLI 9 223 350.5661221211988 1048.6765369637965 3 350.5657531619072 MULTI CID FTMS 0 0 0 11717 417285.75 0.5095365842788004 -1 0.099945068359375 7 Unmodified _VPNPRIKLI_ ENSG00000167657|ENST00000545797|DAPK3;nc|ENSG00000167657|O43293-2|DAPK3 28.486842064014134 0.1687311288560894 4 VPN{I|L} 4 5 41.034 0.0 0.0 3.9129 0.0 0.0 0.0 622.4045245059866 622.4045245059866 22.37447482181029 0.0 0.0 0.0 0 0.1960906091412345 0.6020599913279624 0.0 0.7134679910804405 VPN{I|L} 3.9129 - 808 + 1 1.365 225811.4 1.0 6995 4727 11717 HBL1_DMSO_200M_050219_2,11724 HBL1_DMSO_200M_050219_2,11724,VPNPRIKLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11725 63.128 389.0 361550.0 25 0 31585.0 + 27862 PLRRGDSV 8 175 450.2569626110224 898.4993722888448 2 450.2581664919853 MULTI CID FTMS 0 0 0 11717 399815.3125 0.6290323992181055 5 -0.4182014465332031 8 Unmodified _PLRRGDSV_ ENSG00000099625|ENST00000650044|CBARP;ENST00000590083.5_1_19:1229180-1230152:-|nuORF 15.768221252438446 0.6779680726941459 4 G{M(Oxidation (M))|F}Q 3 7 15.56 0.0 0.0 1.7317 0.0 0.0 111.09038898981984 452.2278771481346 563.3182661379544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 G{M(Oxidation (M))|F}Q 1.7317 - 1510 + 1 1.365 113376.0 1.0 6996 4727 11717 HBL1_DMSO_200M_050219_2,11725 HBL1_DMSO_200M_050219_2,11725,PLRRGDSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11726 63.135 394.0 653430.0 25 0 99766.0 + 11476 GIIDGSPRL 9 167 464.2666612498578 926.5187695665156 2 464.2663452029228 MULTI CID FTMS 0 0 0 11717 369221.3125 0.1850350225094365 -3 0.2741203308105469 9 Unmodified _GIIDGSPRL_ chr13:46344831-46349286|46|25.39|0.99|4.68|-|ENST00000417405|RUBCNL,RUBCNL;ENSG00000102445|ENST00000429979|RUBCNL;nc|ENSG00000102445|Q9H714-1|RUBCNL;nc|ENSG00000102445|Q9H714-2|RUBCNL;nc|ENSG00000102445|Q9H714-4|RUBCNL 56.17704186161178 0.0281986971544335 4 VA{I|L}DGSPR{I|L} 9 2 + 89.722 0.0 0.0 9.6838 9.6838 87.141 0.0 0.0 0.0 34.97302484056646 12.923064272591231 12.923064272591231 3.735806628125914 0 0.9247425010840048 2.0 1.079689690656103 0.6549471895720984 VA{I|L}DGSPR{I|L};VA{I|L}DGSRP{I|L};VA{I|L}DG[RP]TV;VA{I|L}DG[RP]S{I|L};VA{I|L}{I|L}QTWP;VA{I|L}[{M(Oxidation (M))|F}E][H{I|L}]V;VA{I|L}[WR]WP;VA{I|L}[{M(Oxidation (M))|F}E][HV]{I|L};EVG{I|L}GSPR{I|L};VEG{I|L}GSPR{I|L} 9.6838;9.2806;8.289;7.9641;7.4647;6.0329;5.9662;5.708;5.5095;5.5095 -;-;-;-;-;-;-;-;-;- 1445 + 1 1.365 198521.1 1.0 6997 4727 11717 HBL1_DMSO_200M_050219_2,11726 HBL1_DMSO_200M_050219_2,11726,GIIDGSPRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11727 63.142 380.0 305390.0 25 0 14213.0 + 18264 KVIEEEWQQV 10 142 644.3328144523081 1286.651075971416 2 644.3355590701103 MULTI CID FTMS 0 0 0 11717 333611.03125 0.5573454481514423 1 -0.0968742370605468 10 Unmodified _KVIEEEWQQV_ nc|ENSG00000120802|P42166|TMPO 53.40400417844725 0.0601721406801337 4 [{I|L}V]KEEEWQQV 10 2 + 52.169 0.0 0.0 4.0546 4.0546 71.415 0.0 0.0 0.0 3.940743320540364 9.092320348646282 3.940743320540364 3.940743320540364 0 0.5629529932484498 0.7958800173440752 1.6976212463643423 0.0 [{I|L}V]KEEEWQQV;[AG]VEAA[KT]WQQV;[AG]QE{I|L}[KT]WQQV;[AG]WE[RK]WQQV;[AG]W[RK]EWQQV;{[QN]|[E{I|L}]|[KN]}KVEEWQQV;[{I|L}V]KEEEW[AG]QV;[{I|L}V]KEEE{[DA]|[EG]}QQV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]EEWQQV;[AG]VSSP[KT]WQQV 4.0546;3.7483;3.6574;3.6404;3.5012;3.501;3.3423;3.3423;3.2559;3.1254 -;-;-;-;-;-;-;-;-;- 5798 1 1.365 91835.7 1.0 6998 4727 11717 HBL1_DMSO_200M_050219_2,11727 HBL1_DMSO_200M_050219_2,11727,KVIEEEWQQV True True KVIEEEWQQV 63.142292 644.33555907011 12061970.0 11717.0 nc|ENSG00000120802|P42166|TMPO 6.174982070922852 2.0 True 10.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11728 63.149 395.0 239580.0 25 0 24850.0 + 13604 HPNSAVLMV 9 120 484.2550387060982 966.4955244789963 2 484.2551147341728 MULTI CID FTMS 0 0 0 11717 317792.15625 0.1806869721363919 3 -0.2351760864257812 11 Unmodified _HPNSAVLMV_ ENSG00000163811|ENST00000407426|WDR43 32.30548876998284 0.1201446275138228 4 [{I|L}P]S[NG]H{I|L}MV 9 5 + 39.573 0.0 0.0 4.0945 4.0945 69.246 0.0 0.0 0.0 2.7547589119159284 7.204547620583249 2.7547589119159284 2.7547589119159284 0 0.718765315847925 2.0 0.8494850021680094 0.0 [{I|L}P]S[NG]H{I|L}MV;[VG]SQPH{I|L}MV;{[QD]|[EN]|[WG]|[KD]|[RS]}QPH{I|L}MV;[{I|L}P]S[NG]{I|L}HMV;[VG]SQP{I|L}HMV;[VG]S[AG]PH{I|L}MV;{[TV]|[{I|L}S]}[NG]PH{I|L}MV;{[VA]|[{I|L}G]}[NS]PH{I|L}MV;{[QN]|[E{I|L}]|[KN]}[EP]H{I|L}MV;{[TV]|[{I|L}S]}P[NG]H{I|L}MV 4.0945;3.8095;3.264;3.1614;2.8764;2.8568;2.7647;2.6355;2.4459;2.384 -;-;-;-;-;-;-;-;-;- 457 1 1.365 76797.2 1.0 6999 4727 11717 HBL1_DMSO_200M_050219_2,11728 HBL1_DMSO_200M_050219_2,11728,HPNSAVLMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11729 63.158 508.0 287330.0 25 0 48196.0 -1 0 82 1091.7688818220322 3272.284816066297 3 1092.101855456829 MULTI CID FTMS 0 0 0 11717 251664.125 0.1677005202739065 -4 0.4174385070800781 12 4 G{M(Oxidation (M))|F}[YG][KC]T 7 -1 16.457 0.0 0.0 0.50292 0.0 0.0 1943.669900150084 569.2367831033484 2512.9066832534327 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9674165578762486 0.3807196863200844 G{M(Oxidation (M))|F}[YG][KC]T 0.50292 - 354 + 1 1.365 116856.1 1.0 7000 4727 11717 HBL1_DMSO_200M_050219_2,11729 HBL1_DMSO_200M_050219_2,11729, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11730 63.167 396.0 670220.0 25 0 53370.0 + 25761 NIVEKLREV 9 191 550.3272263611155 1098.639899789031 2 550.3290893435478 MULTI CID FTMS 0 0 0 11717 240485.0625 0.2063224935085882 -3 0.2741203308105469 13 Unmodified _NIVEKLREV_ ENSG00000132256|ENST00000380034|TRIM5;nc|ENSG00000132256|Q9C035-2|TRIM5;nc|ENSG00000132256|Q9C035-3|TRIM5;nc|ENSG00000132256|Q9C035-4|TRIM5;nc|ENSG00000132256|Q9C035-5|TRIM5;nc|ENSG00000132256|Q9C035-6|TRIM5 63.22749603027936 0.0242951379232427 4 VQVEK{I|L}REV 9 2 + 88.067 0.0 0.0 8.016 8.016 87.043 0.0 0.0 0.0 69.19334966143033 10.499321256797174 10.499321256797174 5.013487579716767 0 1.3831596456423734 2.0 0.9674165578762486 0.25 VQVEK{I|L}REV;N{I|L}VEK{I|L}REV;VQVEK{I|L}RD{I|L};VQVEK{I|L}VVW;N{I|L}VEK{I|L}RD{I|L};N{I|L}VEK{I|L}VVW;VQVV{[SA]|[TG]}{I|L}REV;N{I|L}VV{[SA]|[TG]}{I|L}REV;V[AG]VEK{I|L}REV;VQVV{[SA]|[TG]}{I|L}VVW 8.016;7.5597;7.0582;7.0552;6.6019;6.5988;6.2316;5.7753;5.3575;5.2812 -;+;-;-;-;-;-;-;-;- + 4280 + 1 1.365 199098.7 1.0 7001 4727 11717 HBL1_DMSO_200M_050219_2,11730 HBL1_DMSO_200M_050219_2,11730,NIVEKLREV True True NIVEKLREV 63.166622 550.329089343548 19899580.0 11717.0 nc|ENSG00000132256|Q9C035-6|TRIM5;;nc|ENSG00000132256|Q9C035-5|TRIM5;;nc|ENSG00000132256|Q9C035-4|TRIM5;;nc|ENSG00000132256|Q9C035-2|TRIM5;;nc|ENSG00000132256|Q9C035-3|TRIM5;;ENSG00000132256|ENST00000380034|TRIM5 5.256651878356934 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11731 63.176 505.0 643810.0 25 0 111390.0 + 11951 GNHDCSLV 8 172 422.6828425588211 843.3511321844422 2 422.6834594607353 MULTI CID FTMS 0 0 0 11717 237670.71875 0.7158158278939034 1 -0.0968742370605468 14 Unmodified _GNHDCSLV_ REV__ENSG00000065371|ENST00000405845|ROPN1;REV__ENSG00000114547|ENST00000514116|ROPN1B;REV__nc|ENSG00000114547|Q9BZX4-2|ROPN1B 9.347437153973935 0.7675937258251505 4 [{I|L}A]RDQ{M(Oxidation (M))|F} 6 -1 20.946 0.0 0.0 2.4837 0.0 0.0 0.0 109.94967461720664 109.94967461720664 6.966870270404371 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.4604093769761876 [{I|L}A]RDQ{M(Oxidation (M))|F} 2.4837 - 563 1 1.365 247841.7 1.0 7002 4727 11717 HBL1_DMSO_200M_050219_2,11731 HBL1_DMSO_200M_050219_2,11731,GNHDCSLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11732 63.184 449.0 229400.0 25 0 16303.0 -1 0 117 573.9361947105549 1718.786754731865 3 573.9371826052666 MULTI CID FTMS 0 0 0 11717 239729.484375 1.0 0 0.0 15 4 [{M(Oxidation (M))|F}V]CGGW 6 -1 48.416 0.0 0.0 2.8169 0.0 0.0 0.0 1066.4908502862952 1066.4908502862952 30.981362441963327 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]CGGW 2.8169 - 1514 + 1 1.365 83159.3 1.0 7003 4727 11717 HBL1_DMSO_200M_050219_2,11732 HBL1_DMSO_200M_050219_2,11732, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11733 63.194 610.0 101210.0 25 0 39903.0 -1 0 36 1060.740039050579 0 1060.740039050579 PEAK CID FTMS 0 0 0 -1 0 16 4 Y 1 -1 5.4846 0.0 0.0 0.25877 0.0 0.0 1059.0151600329957 894.3566988580686 1953.371858891064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.25877 - 4 + 1 1.365 49168.8 1.0 7004 4727 11717 HBL1_DMSO_200M_050219_2,11733 HBL1_DMSO_200M_050219_2,11733, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11735 63.198 13.0 2916100.0 25 0 298360.0 + 28401 PSPPRPVEAW 10 69 568.2990882343107 1134.583623535421 2 568.2993041872978 MULTI CID FTMS 0 0 0 11734 4729714.5 0.4051858437510788 -5 0.514312744140625 1 Unmodified _PSPPRPVEAW_ REV__ENST00000483618.1_1_1:43916939-43917020:-|nuORF 3.2813086475875832 0.7114585191678878 4 T{I|L}V 3 -1 20.445 0.0 0.0 1.802 0.0 0.0 334.1752505879588 484.18857752017817 818.363828108137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T{I|L}V 1.802 - 56 + 1 1.34 34030.6 1.0 7005 4728 11734 HBL1_DMSO_200M_050219_2,11735 HBL1_DMSO_200M_050219_2,11735,PSPPRPVEAW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11736 63.201 119.0 1216900.0 25 0 157820.0 + -1 QPYAVSEL 8 89 905.4488231306352 1808.88309332807 2 906.4557372927666 MULTI CID FTMS 0 0 0 11734 974612.0625 0.8876105813875256 -1 0.0968742370605468 2 ENST00000566622.5_1_15:66794044-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENSG00000174444|ENST00000307961|RPL4;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF 4 [QP]YAVSE{I|L} 8 -1 56.087 0.0 0.0 3.1006 0.0 0.0 0.0 918.4196870620224 918.4196870620224 9.616001231085562 0.0 0.0 0.0 0 0.0 1.154901959985743 1.2302046884880935 2.2215141619232908 [QP]YAVSE{I|L} 3.1006 - 1396 1 1.34 101347.8 1.0 7006 4728 11734 HBL1_DMSO_200M_050219_2,11736 HBL1_DMSO_200M_050219_2,11736, False False QPYAVSEL 63.200796 906.455737292767 10387872.0 11734.0 ENST00000566622.5_1_15:66794044-66797161:-|nuORF;;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;;ENSG00000174444|ENST00000307961|RPL4;;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;;ENST00000567229.5_1_15:66795359-66797161:-|nuORF 7.271825631459554 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11737 63.202 15.0 4397100.0 25 0 898730.0 + 5006 DGVAVLKV 8 76 400.7476985190406 799.4808441048813 2 400.7475158572197 MULTI CID FTMS 0 0 0 11734 4870026.0 1.0 0 0.0 3 Unmodified _DGVAVLKV_ ENSG00000144381|ENST00000388968|HSPD1;ENST00000388966.4_1_12:8169981-8170332:-|nuORF;ENST00000530524.1_1_8:7748917-7749049:-|nuORF 48.345845343767074 0.1470278396477103 4 [DG]VAV{I|L}KV 8 0 [DG]V + + 44.694 20.557 7.5824 5.5904 5.5904 55.022 0.0 0.0 0.0 0.0 22.75627591355704 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.2215141619232908 + + [DG]VAV{I|L}KV 5.5904 + + 94 + 1 1.34 59746.2 1.0 7007 4728 11734 HBL1_DMSO_200M_050219_2,11737 HBL1_DMSO_200M_050219_2,11737,DGVAVLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11738 63.203 18.0 2519000.0 25 0 285280.0 + 32324 RYIPTAAAF 9 67 505.2767917760186 1008.5390306188372 2 505.2759887576103 MULTI CID FTMS 0 0 0 11734 2680205.0 0.150835225570333 -3 0.2311859130859375 4 Unmodified _RYIPTAAAF_ ENSG00000058262|ENST00000243253|SEC61A1;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1;nc|ENSG00000065665|Q9H9S3-3|SEC61A2 32.78568957990786 0.1150597335874693 4 [YR]{I|L}[TP]AAA{M(Oxidation (M))|F} 9 0 + 52.101 0.0 0.0 5.166 5.166 80.894 0.0 0.0 0.0 5.642492736872597 40.506981269092606 5.642492736872597 8.940162615404077 0 1.0 0.0 0.9247425010840048 0.0 + + [YR]{I|L}[TP]AAA{M(Oxidation (M))|F};[HV]AA[TP][VP]A{M(Oxidation (M))|F};[YR]{I|L}[PG][VS]A{M(Oxidation (M))|F};[YR]{I|L}[TP]{[NV]|[RG]}{M(Oxidation (M))|F};[YR]{I|L}[PG]A[VS]{M(Oxidation (M))|F};[YR]{I|L}[QP][VS]{M(Oxidation (M))|F} 5.166;4.2795;2.5137;2.046;1.3249;1.1557 +;-;-;-;-;- + 116 1 1.34 42701.4 1.0 7008 4728 11734 HBL1_DMSO_200M_050219_2,11738 HBL1_DMSO_200M_050219_2,11738,RYIPTAAAF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11739 63.204 46.0 1457900.0 25 0 216700.0 + 5980 DQYPYLKSV 9 86 556.7850630269745 1111.555573120749 2 556.7853881716728 MULTI CID FTMS 0 0 0 11734 1732702.875 0.8378936876092391 -5 0.514312744140625 5 Unmodified _DQYPYLKSV_ ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF 38.61474834105838 0.0830609365873449 4 VSK{I|L}QN 6 8 40.75 0.0 0.0 3.6661 0.0 0.0 424.1589799584426 0.0 424.1589799584426 0.0 -2.5006445626977225 -2.5006445626977225 0.0 0 0.0 0.0 0.0 0.5 VSK{I|L}QN 3.6661 - 224 + 1 1.34 57693.9 1.0 7009 4728 11734 HBL1_DMSO_200M_050219_2,11739 HBL1_DMSO_200M_050219_2,11739,DQYPYLKSV True True DQYPYLKSV 63.204411 556.785388171673 89560776.0 11734.0 ENSG00000147872|ENST00000276914|PLIN2;;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;;ENST00000475923.1_1_9:19126103-19126313:-|nuORF 8.427225748697916 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11740 63.206 46.0 1166500.0 25 0 81429.0 + 44523 YPDRNLPTI 9 93 544.7894064442501 1087.5642599553 2 544.7903930544853 MULTI CID FTMS 0 0 0 11734 963843.4375 0.2122398469731146 -6 0.5670089721679688 6 Unmodified _YPDRNLPTI_ ENSG00000115539|ENST00000264254|PDCL3 32.78568957990786 0.1150597335874693 4 YPV 3 7 34.922 0.0 0.0 3.211 0.0 0.0 0.0 725.3587130182249 725.3587130182249 11.96990274972464 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 YPV 3.211 - 155 + 1 1.34 49994.5 1.0 7010 4728 11734 HBL1_DMSO_200M_050219_2,11740 HBL1_DMSO_200M_050219_2,11740,YPDRNLPTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11741 63.207 46.0 1422400.0 25 0 169890.0 4884 DGGSPVINYI 10 75 517.7622088386994 1033.5098647441987 2 517.7626830935478 MULTI CID FTMS 0 0 0 11734 732835.1875 1.0 0 0.0 7 Unmodified _DGGSPVINYI_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 14.838274106304384 0.5985701837916485 4 T{[HG]|PP}{I|L}VT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 8 7 20.583 0.0 0.0 1.9916 0.0 0.0 113.04404325655578 0.0 113.04404325655578 0.0 3.632900219968107 0.0 0.0 0 0.0 0.0 1.1989700043360187 0.0 T{[HG]|PP}{I|L}VT{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 1.9916 - 81 + 1 1.34 54595.4 1.0 7011 4728 11734 HBL1_DMSO_200M_050219_2,11741 HBL1_DMSO_200M_050219_2,11741,DGGSPVINYI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11742 63.209 107.0 943770.0 25 0 142990.0 + 30820 RIIDVVYNA 9 89 531.8007617129515 1061.586970492703 2 531.8017455935478 MULTI CID FTMS 0 0 0 11734 723884.125 0.0098162276853904 -5 0.514312744140625 8 Unmodified _RIIDVVYNA_ ENSG00000142937|ENST00000396651|RPS8 24.99096001346401 0.2132109383330889 4 DVVY{[QG]|[NA]} 6 3 35.278 0.0 0.0 3.3232 0.0 0.0 382.26988417793126 0.0 382.26988417793126 0.0 12.271212547196622 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + DVVY{[QG]|[NA]} 3.3232 + + 65 1 1.34 86372.0 1.0 7012 4728 11734 HBL1_DMSO_200M_050219_2,11742 HBL1_DMSO_200M_050219_2,11742,RIIDVVYNA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11743 63.217 463.0 615940.0 25 0 75982.0 + 20221 LLCYDVIVP 9 151 345.5237781524476 1033.5495050575428 3 345.5239440798759 MULTI CID FTMS 0 0 0 11734 354055.34375 0.7518059799710326 3 -0.2267913818359375 9 Unmodified _LLCYDVIVP_ REV__ENSG00000156931|ENST00000625842|VPS8;REV__ENST00000492449.5_1_3:184603882-184769810:+|nuORF;REV__nc|ENSG00000156931|Q8N3P4-3|VPS8 23.1484247019978 0.2366544122328345 4 {I|L}{I|L}T 3 -1 31.114 0.0 0.0 3.0104 0.0 0.0 0.0 703.3107842516229 703.3107842516229 15.510548153281594 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 {I|L}{I|L}T 3.0104 - 316 + 1 1.34 229756.8 1.0 7013 4728 11734 HBL1_DMSO_200M_050219_2,11743 HBL1_DMSO_200M_050219_2,11743,LLCYDVIVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11744 63.221 163.0 220430.0 25 0 31243.0 + 18876 LASVVARHS 9 70 470.2723474312812 938.5301419293623 2 470.2715637087822 MULTI CID FTMS 0 0 0 11734 336159.9375 0.7025584288779239 -1 0.0968742370605468 10 Unmodified _LASVVARHS_ REV__ENST00000254508.6_1_3:13358912-13359077:-|nuORF 7.289230182591677 0.6602208344931196 4 V 1 -1 10.485 0.0 0.0 1.1171 0.0 0.0 821.4508934325835 0.0 821.4508934325835 0.0 0.1059464953496913 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1171 + + 31 + 1 1.34 35046.3 1.0 7014 4728 11734 HBL1_DMSO_200M_050219_2,11744 HBL1_DMSO_200M_050219_2,11744,LASVVARHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11745 63.224 148.0 548470.0 25 0 62817.0 + -1 IIYPTPKVV 9 111 515.3207222005543 1028.6268914679083 2 515.3213989138603 MULTI CID FTMS 0 0 0 11734 291413.75 0.5138880102349529 4 -0.3213272094726562 11 Carbamidomethyl (C) _LISLC(Carbamidomethyl (C))VLVL_ nc|ENSG00000180773|Q6YBV0-2|SLC36A4;ENST00000527503.1_1_11:92881705-92887463:-|nuORF;ENSG00000180773|ENST00000326402|SLC36A4 30.22481116460888 0.1466181017706357 4 {I|L}{I|L}YPT 5 -1 49.252 0.0 0.0 4.7881 0.0 0.0 0.0 438.2732179904082 438.2732179904082 35.75720713938118 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.8494850021680094 0.0 {I|L}{I|L}YPT 4.7881 - 446 + 1 1.34 67487.3 1.0 7015 4728 11734 HBL1_DMSO_200M_050219_2,11745 HBL1_DMSO_200M_050219_2,11745,LISLCVLVL False False IIYPTPKVV 63.22356 515.32139891386 8663246.0 11734.0 nc|ENSG00000180773|Q6YBV0-2|SLC36A4;;ENST00000527503.1_1_11:92881705-92887463:-|nuORF;;ENSG00000180773|ENST00000326402|SLC36A4 4.288453817367554 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11746 63.231 424.0 426490.0 25 0 36890.0 + -1 RLPDQFSKL 9 184 552.7680460743543 1103.5215392155085 2 552.7679321169853 MULTI CID FTMS 0 0 0 11734 211186.703125 0.0151435496051314 10 -0.9386558532714844 12 2 Carbamidomethyl (C),Oxidation (M) _VLC(Carbamidomethyl (C))C(Carbamidomethyl (C))VM(Oxidation (M))PPL_ nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;ENSG00000158987|ENST00000509018|RAPGEF6;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;nc|ENSG00000158987|Q8TEU7-6|RAPGEF6;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6 20.871210003555333 0.2717241269066626 4 [{I|L}V]D[PG]Q{M(Oxidation (M))|F}S{[QN]|[E{I|L}]|[KN]} 10 -1 + 39.134 0.0 0.0 3.5462 3.5462 70.499 0.0 0.0 0.0 4.305234507957891 4.286662482156338 4.286662482156338 4.305234507957891 0 0.555462187404089 1.6989700043360187 0.4247425010840047 0.0 [{I|L}V]D[PG]Q{M(Oxidation (M))|F}S{[QN]|[E{I|L}]|[KN]};[R{I|L}][DP]Q{M(Oxidation (M))|F}S{[QN]|[E{I|L}]|[KN]};[{I|L}V]D[PG][AG]{M(Oxidation (M))|F}S{[QN]|[E{I|L}]|[KN]};[{I|L}P][RD]Q{M(Oxidation (M))|F}S{[QN]|[E{I|L}]|[KN]};[{I|L}V]D[PG]Q{[ES]|[DT]|[{I|L}C]}YP;[R{I|L}][DP][AG]{M(Oxidation (M))|F}S{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}[RP]Q{M(Oxidation (M))|F}S{[QN]|[E{I|L}]|[KN]};[QP][KQ]Q{M(Oxidation (M))|F}S{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}V[PG]Q{M(Oxidation (M))|F}S{[QN]|[E{I|L}]|[KN]};[KS][HT]R{M(Oxidation (M))|F}S{[QN]|[E{I|L}]|[KN]} 3.5462;3.1561;2.7158;2.4095;2.343;2.3217;2.3139;2.18;2.1544;2.1177 -;-;-;-;-;-;-;-;-;- 1269 1 1.34 141970.8 1.0 7016 4728 11734 HBL1_DMSO_200M_050219_2,11746 HBL1_DMSO_200M_050219_2,11746,VLCCVMPPL False False RLPDQFSKL 63.231121 552.767932116985 7312855.0 11734.0 nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;;ENSG00000158987|ENST00000509018|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-6|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6 4.499814033508301 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11747 63.235 178.0 553240.0 25 0 92652.0 + + 40557 TVLDKTLSV 9 124 488.2901030311975 974.565653129195 2 488.2915832400322 MULTI CID FTMS 0 0 0 11734 237050.171875 0.1213221219635744 -4 0.3709945678710937 13 Unmodified _VKETISISV_ nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 34.40172386719151 0.1061884637610825 4 {[TV]|[{I|L}S]}[VG]T{I|L}S 7 -1 48.139 0.0 0.0 4.9396 0.0 0.0 0.0 314.1721954478075 314.1721954478075 17.91377776353434 0.0 0.0 0.0 0 0.5 2.0 1.6184151806525389 0.0 {[TV]|[{I|L}S]}[VG]T{I|L}S 4.9396 - 660 1 1.34 83218.4 1.0 7017 4728 11734 HBL1_DMSO_200M_050219_2,11747 HBL1_DMSO_200M_050219_2,11747,VKETISISV False False TVLDKTLSV 63.234575 488.291583240032 29124012.0 11734.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 4.688105185826619 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11749 63.239 0.2 175950000.0 25 0 14448000.0 + 22355 LPSPLKQTI 9 63 498.8081792005347 995.6018054678694 2 498.8086425662041 MULTI CID FTMS 0 0 0 11748 256437984.0 0.9678792019286356 2 -0.1864013671875 1 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 38.17557092003332 0.0854718145212029 4 {I|L}PS[{I|L}P][KQ]T{I|L} 9 0 + 61.365 0.0 0.0 6.1636 6.1636 91.693 0.0 0.0 0.0 31.18801098477617 9.370514164935514 9.370514164935514 61.36529865438048 0 1.16944517631652 1.6989700043360187 0.3807196863200844 0.0 + + {I|L}PS[{I|L}P][KQ]T{I|L} 6.1636 + + 264 + 1 1.34 34002.3 1.0 7018 4729 11748 HBL1_DMSO_200M_050219_2,11749 HBL1_DMSO_200M_050219_2,11749,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11750 63.24 2.5 18501000.0 25 0 2786600.0 9540 FLGIYHLGA 9 53 495.772741823778 989.530930714356 2 495.7730590701103 MULTI CID FTMS 0 0 0 11748 21368920.0 0.91928122255353 1 -0.0979118347167968 2 Unmodified _FLGIYHLGA_ ENSG00000006757|ENST00000381042|PNPLA4 20.871210003555333 0.2717241269066626 4 Q{M(Oxidation (M))|F}{I|L}Q 4 8 41.186 0.0 0.0 4.1621 0.0 0.0 455.2504444806656 0.0 455.2504444806656 0.0 27.2062251842808 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 Q{M(Oxidation (M))|F}{I|L}Q 4.1621 - 54 1 1.34 40023.9 1.0 7019 4729 11748 HBL1_DMSO_200M_050219_2,11750 HBL1_DMSO_200M_050219_2,11750,FLGIYHLGA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11751 63.241 12.0 2401600.0 25 0 220410.0 -1 DAMKYTIVV 9 64 528.2751655103707 1054.5357780875413 2 528.2757446169853 MULTI CID FTMS 0 0 0 11748 3834972.25 0.9450902881967104 1 -0.0979118347167968 3 Oxidation (M) _DAM(Oxidation (M))KYTIVV_ ENSG00000152234|ENST00000398752|ATP5F1A;nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A 27.628801355627647 0.1796483985696185 4 K[YT]{I|L}VV 6 -1 38.148 0.0 0.0 3.6175 0.0 0.0 333.1001454084 0.0 333.1001454084 0.0 12.206225184280797 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 K[YT]{I|L}VV 3.6175 + + 53 1 1.34 33791.0 1.0 7020 4729 11748 HBL1_DMSO_200M_050219_2,11751 HBL1_DMSO_200M_050219_2,11751,DAMKYTIVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11752 63.242 14.0 3246500.0 25 0 399760.0 + 26668 NYIEGTKML 9 74 534.7723036613658 1067.5300543895314 2 534.7735473513603 MULTI CID FTMS 0 0 0 11748 3137725.5 0.5502648578590457 2 -0.1864013671875 4 Unmodified _NYIEGTKML_ ENSG00000133313|ENST00000324262|CNDP2;nc|ENSG00000133313|Q96KP4-2|CNDP2 31.26834338654808 0.1333407332142048 4 [YN]{I|L}EGT 6 3 52.128 0.0 0.0 4.883 0.0 0.0 0.0 387.2067965143188 387.2067965143188 30.47991791481905 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.5 0.0 + [YN]{I|L}EGT 4.883 + + 203 + 1 1.34 39538.1 1.0 7021 4729 11748 HBL1_DMSO_200M_050219_2,11752 HBL1_DMSO_200M_050219_2,11752,NYIEGTKML False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11753 63.243 21.0 1717700.0 25 0 221580.0 -1 0 40 603.9677535467044 1808.8814312403133 3 604.3018066287041 MULTI CID FTMS 0 0 0 11748 2170555.0 0.7483374435399653 -2 0.1372642517089843 5 4 G{M(Oxidation (M))|F}{I|L}H[Q{I|L}] 6 -1 32.224 0.0 0.0 1.7814 0.0 0.0 1095.491660169838 0.0 1095.491660169838 0.0 10.986446888048109 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H[Q{I|L}] 1.7814 - 31 1 1.34 35058.4 1.0 7022 4729 11748 HBL1_DMSO_200M_050219_2,11753 HBL1_DMSO_200M_050219_2,11753, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11754 63.245 30.0 1759400.0 25 0 105030.0 22296 LPSASGRTER 10 72 537.2904004915296 1072.566248049859 2 537.2901489138603 MULTI CID FTMS 0 0 0 11748 1439515.25 0.6079838264077797 1 -0.0979118347167968 6 Unmodified _LPSASGRTER_ ENST00000359943.7_1_7:121023036-121036379:-|nuORF 15.847184025352805 0.5816416552707754 4 VSV 3 9 18.544 0.0 0.0 1.729 0.0 0.0 536.2665730644003 248.1041964166625 784.3707694810628 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 VSV 1.729 - 109 + 1 1.34 43838.0 1.0 7023 4729 11748 HBL1_DMSO_200M_050219_2,11754 HBL1_DMSO_200M_050219_2,11754,LPSASGRTER False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11755 63.246 29.0 1427300.0 25 0 103100.0 + 40610 VLAGNFYSMV 10 76 550.7759318080549 1099.5373106829095 2 550.7764770388603 MULTI CID FTMS 0 0 0 11748 913071.5625 0.4844609587171333 -1 0.0403900146484375 7 Unmodified _VLAGNFYSMV_ REV__ENST00000543273.5_1_7:99800189-99821208:-|nuORF 20.453626601364224 0.5043500229302764 4 {[QV]|[N{I|L}]|[RA]|[KV]}VQ 4 -1 26.682 0.0 0.0 2.4267 0.0 0.0 0.0 642.2597282456628 642.2597282456628 0.9767302917421006 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}VQ 2.4267 - 146 1 1.34 40476.2 1.0 7024 4729 11748 HBL1_DMSO_200M_050219_2,11755 HBL1_DMSO_200M_050219_2,11755,VLAGNFYSMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11756 63.247 51.0 685080.0 25 0 67809.0 5179 DINLTQISTL 10 68 559.3084957675447 1116.6024386018894 2 559.3084594607353 MULTI CID FTMS 0 0 0 11748 909464.875 0.2825314788570065 3 -0.2809371948242187 8 Unmodified _DINLTQISTL_ ENSG00000135077|ENST00000307851|HAVCR2 29.84058131909904 0.2982332456971691 4 PT{I|L} 3 8 32.92 0.0 0.0 2.9482 0.0 0.0 787.4071699024738 0.0 787.4071699024738 0.0 22.461987796517704 0.0 0.0 0 0.7742275032520141 0.0 0.3494850021680094 0.0 PT{I|L} 2.9482 - 76 + 1 1.34 37405.3 1.0 7025 4729 11748 HBL1_DMSO_200M_050219_2,11756 HBL1_DMSO_200M_050219_2,11756,DINLTQISTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11757 63.248 32.0 1674200.0 25 0 201370.0 + 23906 LVNAFTEQI 9 77 517.7811079442343 1033.5476629552686 2 517.7823364138603 MULTI CID FTMS 0 0 0 11748 816676.125 0.7901349010718217 4 -0.3525352478027344 9 Unmodified _LVNAFTEQI_ ENSG00000115129|ENST00000238721|TP53I3 20.453626601364224 0.2830276176381075 4 {I|L}T 2 7 25.217 0.0 0.0 2.4398 0.0 0.0 0.0 816.3935658620891 816.3935658620891 3.5733249643126896 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}T 2.4398 - 60 + 1 1.34 47519.4 1.0 7026 4729 11748 HBL1_DMSO_200M_050219_2,11757 HBL1_DMSO_200M_050219_2,11757,LVNAFTEQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11758 63.25 66.0 976720.0 25 0 81577.0 + 4183 DAPIVAHL 8 74 418.2371563175401 834.4597597018802 2 418.2377502322197 MULTI CID FTMS 0 0 0 11748 859233.25 0.1558890657812975 4 -0.3525352478027344 10 Unmodified _DAPIVAHL_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 36.46614268402704 0.2934124525509074 4 {[DA]|[EG]}P{I|L}VAH{I|L} 8 0 + 61.458 0.0 0.0 7.365 7.365 95.838 0.0 0.0 0.0 36.05172045919087 8.393457111251656 8.393457111251656 61.45779558159855 0 0.6109243748081782 2.0 0.0 0.0 + + {[DA]|[EG]}P{I|L}VAH{I|L} 7.365 + + 77 + 1 1.34 58185.8 1.0 7027 4729 11748 HBL1_DMSO_200M_050219_2,11758 HBL1_DMSO_200M_050219_2,11758,DAPIVAHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11759 63.257 414.0 334960.0 25 0 38407.0 -1 WLTRIITLCSL 11 113 688.3902087074724 1374.7658644817448 2 688.8929321169853 MULTI CID FTMS 0 0 0 11748 320153.6875 0.1639660676349038 3 -0.2809371948242187 11 Carbamidomethyl (C) _WLTRIITLC(Carbamidomethyl (C))SL_ ENST00000464295.5_2_3:119963192-120003925:-|nuORF 12.240655878213236 0.7805268987462184 4 [{I|L}P]SP{I|L}K[{M(Oxidation (M))|F}T]{I|L} 9 -1 36.714 0.0 0.0 2.6705 0.0 0.0 0.0 375.13620185985104 375.13620185985104 9.961054822745496 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.1307196863200843 0.2887254899964357 [{I|L}P]SP{I|L}K[{M(Oxidation (M))|F}T]{I|L} 2.6705 - 1451 1 1.34 103638.7 1.0 7028 4729 11748 HBL1_DMSO_200M_050219_2,11759 HBL1_DMSO_200M_050219_2,11759,WLTRIITLCSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11760 63.261 220.0 645920.0 25 0 94527.0 + 44607 YPFKPPKI 8 125 330.5324354067559 988.5754768204677 3 330.5315734744072 MULTI CID FTMS 0 0 0 11748 290587.3125 0.0266083131534132 -25 2.360420227050781 12 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 47.899 0.0 0.0 4.8453 4.8453 78.25 0.0 0.0 0.0 18.056398546332304 5.828956512079344 5.828956512079344 7.252989430583675 0 0.0 0.958607314841775 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};YP{M(Oxidation (M))|F}KP{I|L}[KP];Y{I|L}MKPPK{I|L};YP{M(Oxidation (M))|F}K{I|L}P[KP];Y{I|L}MKP{I|L}[KP];Y{I|L}MK{I|L}P[KP] 4.8453;4.1116;4.0537;3.7091;3.3201;2.9175 +;-;-;-;-;- + 238 + 1 1.34 114520.3 1.0 7029 4729 11748 HBL1_DMSO_200M_050219_2,11760 HBL1_DMSO_200M_050219_2,11760,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11761 63.269 441.0 401930.0 25 0 32457.0 1214 AIFFIVFT 8 185 479.2778350048229 956.541117076446 2 479.2787353396416 MULTI CID FTMS 0 0 0 11748 283175.78125 0.2218908359651005 5 -0.4562263488769531 13 Unmodified _AIFFIVFT_ ENSG00000162341|ENST00000294309|TPCN2;ENST00000442692.2_1_11:68822646-68853210:+|nuORF;ENST00000535009.5_1_11:68816453-68846494:+|nuORF 18.13498045792455 0.6430038125133779 4 [{I|L}A]PPVN{M(Oxidation (M))|F}TV 9 5 + 28.92 0.0 0.0 3.0234 3.0234 65.465 0.0 0.0 0.0 13.168242628472132 2.218487496163569 2.218487496163569 2.218487496163569 0 0.0 0.6020599913279624 0.7070683865866922 0.0 [{I|L}A]PPVN{M(Oxidation (M))|F}TV;[{I|L}A]PPVN{M(Oxidation (M))|F}S{I|L};[{I|L}A]PPVNYA{I|L};[{I|L}A]PPVGG{M(Oxidation (M))|F}TV;[{I|L}A]PPVGG{M(Oxidation (M))|F}S{I|L};[{I|L}A]PPVGGYA{I|L};[{I|L}A]PPV[HQ]PV;[{I|L}A]PPV[YQ]AV;[{I|L}A]PPV[YQ]G{I|L};[{I|L}A]P[W{M(Oxidation (M))|F}]KPV 3.0234;2.7915;2.2051;2.0608;1.8288;1.2424;1.2229;0.97555;0.74362;0.54562 -;-;-;-;-;-;-;-;-;- 668 + 1 1.34 136011.3 1.0 7030 4729 11748 HBL1_DMSO_200M_050219_2,11761 HBL1_DMSO_200M_050219_2,11761,AIFFIVFT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11762 63.277 417.0 422450.0 25 0 29667.0 + 41526 VPNPRIKLI 9 164 525.3452009672948 1048.6758490013897 2 525.3467895388603 MULTI CID FTMS 0 0 0 11748 266894.25 1.0 0 0.0 14 Unmodified _VPNPRIKLI_ ENSG00000167657|ENST00000545797|DAPK3;nc|ENSG00000167657|O43293-2|DAPK3 57.47134341890925 0.0274820932774257 4 VPN 3 6 42.677 0.0 0.0 4.0696 0.0 0.0 0.0 735.4907210566822 735.4907210566822 12.42992819099939 0.0 0.0 0.0 0 0.6747425010840047 1.0 0.0 0.2742275032520141 + VPN 4.0696 + + 1033 + 1 1.34 139086.7 1.0 7031 4729 11748 HBL1_DMSO_200M_050219_2,11762 HBL1_DMSO_200M_050219_2,11762,VPNPRIKLI True True VPNPRIKLI 63.276692 525.34678953886 1119181.125 11748.0 nc|ENSG00000167657|O43293-2|DAPK3;;ENSG00000167657|ENST00000545797|DAPK3 4.115997950236003 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11763 63.284 429.0 506500.0 25 0 48070.0 + 32178 RVVDALGNAI 10 179 514.2980570221921 1026.581561111184 2 514.3011352419853 MULTI CID FTMS 0 0 0 11748 272955.75 0.3641073970804658 -3 0.2372093200683593 15 Unmodified _RVVDALGNAI_ ENSG00000152234|ENST00000398752|ATP5F1A;ENST00000573189.2_1_16:72040085-72040205:-|nuORF;ENST00000589611.1_1_18:43669530-43671830:-|nuORF;ENST00000590448.5_1_18:43669752-43675082:-|nuORF;nc|ENSG00000152234|P25705-2|ATP5F1A 24.881564428377168 0.4096545554397951 4 {I|L}{I|L}DQA{I|L}GNA{I|L} 10 4 + 76.833 0.0 0.0 7.4843 7.4843 82.712 0.0 0.0 0.0 13.793913382705853 16.53212513775344 13.793913382705853 3.0102999566398125 0 1.4436726795685342 2.0 0.0 0.0 {I|L}{I|L}DQA{I|L}GNA{I|L};{I|L}{I|L}DQ{I|L}AGNA{I|L};{I|L}{I|L}[WQ]{I|L}GNA{I|L};{I|L}{I|L}DQA{I|L}GGGA{I|L};{I|L}{I|L}DQ{I|L}AGGGA{I|L};[VP]KES{I|L}GNA{I|L};{I|L}{I|L}DQ{I|L}QNA{I|L};{I|L}{I|L}[KS][DP]GNA{I|L};{I|L}{I|L}[WQ]{I|L}GGGA{I|L};[{I|L}A]REA{I|L}GNA{I|L} 7.4843;7.1911;6.9637;6.5916;6.2983;6.1406;6.0677;6.0668;6.0668;5.886 -;-;-;-;-;-;-;-;-;- 2815 1 1.34 167947.5 1.0 7032 4729 11748 HBL1_DMSO_200M_050219_2,11763 HBL1_DMSO_200M_050219_2,11763,RVVDALGNAI False True RVVDALGNAI 63.284339 514.301135241985 6822008.5 11748.0 ENST00000589611.1_1_18:43669530-43671830:-|nuORF;;ENST00000590448.5_1_18:43669752-43675082:-|nuORF;;nc|ENSG00000152234|P25705-2|ATP5F1A;;ENST00000573189.2_1_16:72040085-72040205:-|nuORF;;ENSG00000152234|ENST00000398752|ATP5F1A 3.656124671300253 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11764 63.293 481.0 319340.0 25 0 27560.0 + 23792 LVDHLNVGV 9 186 483.27306338820415 964.5315738432084 2 483.2736389040947 MULTI CID FTMS 0 0 0 11748 213852.109375 1.0 0 0.0 16 Unmodified _LVDHLNVGV_ ENSG00000135441|ENST00000548925|BLOC1S1;nc|ENSG00000135441|P78537-2|BLOC1S1 47.74868867922204 0.0453060283459952 4 [{I|L}V][HD]{I|L}NVGV 9 0 + 43.883 0.0 0.0 4.5497 4.5497 66.109 0.0 0.0 0.0 0.1579426718323162 3.4678748622465605 0.1579426718323162 0.1579426718323162 0 0.75 1.3979400086720375 0.2614393726401688 0.0 + + [{I|L}V][HD]{I|L}NVGV;{NN|[MP]|[D{I|L}]|[EV]}HV{I|L}NVGV;[HD]{I|L}V{I|L}NVGV;[H{I|L}]DV{I|L}NVGV;[{I|L}V][HD]N{I|L}VGV;{NN|[MP]|[D{I|L}]|[EV]}HVN{I|L}VGV;[HD]{I|L}VN{I|L}VGV;[H{I|L}]DVN{I|L}VGV;[HV]EV{I|L}NVGV;{NN|[MP]|[D{I|L}]|[EV]}HNV{I|L}VGV 4.5497;4.5333;4.3727;4.3298;4.2376;4.2212;4.0606;4.0177;3.9601;3.9091 +;-;-;-;-;-;-;-;-;- + 3901 1 1.34 116778.3 1.0 7033 4729 11748 HBL1_DMSO_200M_050219_2,11764 HBL1_DMSO_200M_050219_2,11764,LVDHLNVGV True True LVDHLNVGV 63.292833 483.273638904095 2404703.75 11748.0 ENSG00000135441|ENST00000548925|BLOC1S1;;nc|ENSG00000135441|P78537-2|BLOC1S1 6.405691782633464 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11765 63.303 571.0 219300.0 25 0 17334.0 + 27188 PGGHQSQD 8 180 413.1796714926317 0 413.2336913943291 PEAK CID FTMS 0 0 0 11748 46257.4921875 1.0 0 0.0 17 Unmodified _PGGHQSQD_ REV__ENST00000503051.1_1_4:53527145-53527238:+|nuORF 2.889219685676258 0.5898224805723975 4 V 1 -1 6.9897 0.0 0.0 0.84791 0.0 0.0 640.1866307276479 82.06701837711171 722.2536491047596 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.84791 - 44 + 1 1.34 98880.2 1.0 7034 4729 11748 HBL1_DMSO_200M_050219_2,11765 HBL1_DMSO_200M_050219_2,11765,PGGHQSQD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11766 63.313 522.0 415300.0 25 0 38296.0 + 28873 QALGITTKI 9 182 472.79280343410034 943.5710539350008 2 472.7697326540947 MULTI CID FTMS 0 0 0 11748 64589.15625 0.0977424291047433 -3 0.2372093200683593 18 Unmodified _QALGITTKI_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000459899.1_1_14:35857513-35858113:-|nuORF;ENST00000546564.5_1_12:120636605-120638589:-|nuORF;ENST00000548568.5_1_12:120636605-120638589:-|nuORF;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 61.60191391372663 0.0251951588191061 4 [QA]{I|L}G{I|L}TTK{I|L} 9 0 + 69.534 0.0 0.0 7.3693 7.3693 93.392 0.0 0.0 0.0 54.44788700583325 14.092568545288067 14.092568545288067 15.463015529085538 0 1.075257498915995 1.3979400086720375 0.5451140161145328 0.1549471895720985 + + [QA]{I|L}G{I|L}TTK{I|L};[QA]{I|L}G{I|L}TKT{I|L};[QA]{I|L}G{I|L}TT{I|L}K;[QA]{I|L}G{I|L}T{I|L}TK;[KG][PS]{I|L}TTK{I|L};[KG][PS]{I|L}TKT{I|L};[KG][PS]{I|L}TT{I|L}K;[KG][PS]{I|L}T{I|L}TK;[KT]T{I|L}{[VA]|[{I|L}G]}[QA]{I|L};[KP][HV]{I|L}HT{I|L} 7.3693;5.7305;5.5178;4.2232;3.8445;2.2057;1.9931;0.69844;0.55699;0.26915 +;-;-;-;-;-;-;-;-;- + 934 + 1 1.34 165584.8 1.0 7035 4729 11748 HBL1_DMSO_200M_050219_2,11766 HBL1_DMSO_200M_050219_2,11766,QALGITTKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11767 63.322 501.0 305540.0 25 0 9296.0 + 43364 WPRPSSPPVV 10 166 561.3088007913716 1120.603048649543 2 561.7716552615166 MULTI CID FTMS 0 0 0 -1 0 19 Unmodified _WPRPSSPPVV_ ENSG00000163082|ENST00000321276|SGPP2;nc|ENSG00000163082|Q8IWX5-2|SGPP2 41.95555342248728 0.1369168616057562 4 PWC(Carbamidomethyl (C))KTV 6 8 32.423 0.0 0.0 2.8934 0.0 0.0 331.21048762469485 0.0 331.21048762469485 0.0 11.76236495148401 0.0 0.0 0 0.3807196863200844 0.0 0.2215141619232908 1.0994850021680094 PWC(Carbamidomethyl (C))KTV 2.8934 - 4436 + 1 1.34 124635.0 1.0 7036 4729 11748 HBL1_DMSO_200M_050219_2,11767 HBL1_DMSO_200M_050219_2,11767,WPRPSSPPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11768 63.332 598.0 239470.0 25 0 12962.0 + 29294 FPFDPERRV 9 172 387.8965913723002 1160.667944717101 3 388.2048217654228 MULTI CID FTMS 0 0 0 -1 0 20 Unmodified _QIFSRLERL_ nc|ENSG00000108469|O94762-2|RECQL5;nc|ENSG00000108469|O94762-4|RECQL5;nc|ENSG00000108469|O94762-3|RECQL5;ENSG00000108469|ENST00000317905|RECQL5 4.189502756095605 0.7684307469601125 4 {[VA]|[{I|L}G]}A{M(Oxidation (M))|F}[RN]C(Carbamidomethyl (C))VP 9 7 15.778 0.0 0.0 1.3594 0.0 0.0 0.0 143.11882702169433 143.11882702169433 -1.8469143081759896 0.0 -1.8469143081759896 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}A{M(Oxidation (M))|F}[RN]C(Carbamidomethyl (C))VP 1.3594 - 423 1 1.34 120482.4 1.0 7037 4729 11748 HBL1_DMSO_200M_050219_2,11768 HBL1_DMSO_200M_050219_2,11768,QIFSRLERL False False FPFDPERRV 63.332495 388.204821765423 1275941.75 11748.0 nc|ENSG00000108469|O94762-2|RECQL5;;nc|ENSG00000108469|O94762-4|RECQL5;;nc|ENSG00000108469|O94762-3|RECQL5;;ENSG00000108469|ENST00000317905|RECQL5 3.116074005762736 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11770 63.339 161.0 650880.0 25 0 119130.0 + 1361 ALAAALAY 8 125 382.2201799290117 762.4258069248234 2 382.2198058962822 MULTI CID FTMS 0 0 0 11769 911194.9375 0.227326250970249 4 -0.3583145141601562 1 Unmodified _ALAAALAY_ REV__ENSG00000142661|ENST00000374434|MYOM3;REV__ENST00000475306.1_1_1:24410803-24434643:-|nuORF;REV__nc|ENSG00000142661|Q5VTT5-2|MYOM3 0.7936320650641473 0.8195151834710337 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 1.316 86275.2 1.0 7038 4730 11769 HBL1_DMSO_200M_050219_2,11770 HBL1_DMSO_200M_050219_2,11770,ALAAALAY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11771 63.34 40.0 1712800.0 25 0 292600.0 + 26115 NPPLKLSL 8 102 441.276536538897 880.538520144594 2 441.2763854861259 MULTI CID FTMS 0 0 0 11769 1307048.625 0.9674109545037708 1 -0.0884895324707031 2 Unmodified _NPPLKLSL_ REV__CON__ENSEMBL:ENSBTAP00000024146;REV__ENSG00000175899|ENST00000318602|A2M;REV__ENST00000462568.1_1_12:9232657-9243123:-|nuORF 28.486842064014134 0.4448922141344407 4 NP 2 -1 34.825 0.0 0.0 3.955 0.0 0.0 0.0 666.4211519830686 666.4211519830686 18.44953678630068 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 0.0 0.0 NP 3.955 + + 390 + 1 1.316 58927.8 1.0 7039 4730 11769 HBL1_DMSO_200M_050219_2,11771 HBL1_DMSO_200M_050219_2,11771,NPPLKLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11772 63.341 32.0 2071600.0 25 0 374690.0 + 6349 DVPGAGQH 8 81 390.6849126013257 779.3552722694515 2 390.6852294802666 MULTI CID FTMS 0 0 0 11769 1803247.0 0.8430821911243507 -1 0.0979118347167968 3 Unmodified _DVPGAGQH_ REV__ENST00000231504.5_1_5:133541817-133561610:-|nuORF 5.760428011301431 0.7893668129297577 4 VVE 3 -1 20.29 0.0 0.0 2.6035 0.0 0.0 0.0 449.15209168767336 449.15209168767336 3.9794000867203714 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 VVE 2.6035 - 38 1 1.316 56747.2 1.0 7040 4730 11769 HBL1_DMSO_200M_050219_2,11772 HBL1_DMSO_200M_050219_2,11772,DVPGAGQH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11773 63.342 38.0 1435000.0 25 0 209440.0 + 3574 DAAEIRLV 8 66 443.753444504845 885.49233607649 2 443.7534057497978 MULTI CID FTMS 0 0 0 11769 1528302.0 0.2139436840149854 -3 0.2351760864257812 4 Unmodified _DAAEIRLV_ ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF;ENST00000494618.1_1_2:232322276-232325237:-|nuORF 32.30548876998284 0.3644845974844379 4 {[DA]|[EG]}AE{I|L}R{I|L}V 8 0 + 61.309 0.0 0.0 6.9237 6.9237 76.202 0.0 0.0 0.0 23.861687672771488 0.457574905606755 0.457574905606755 0.457574905606755 0 0.9247425010840048 2.0 0.0 0.0 + + {[DA]|[EG]}AE{I|L}R{I|L}V;{[DA]|[EG]}AE{I|L}RV{I|L} 6.9237;6.872 +;- + 63 + 1 1.316 50156.5 1.0 7041 4730 11769 HBL1_DMSO_200M_050219_2,11773 HBL1_DMSO_200M_050219_2,11773,DAAEIRLV False True DAAEIRLV 63.342374 443.753405749798 105981344.0 11769.0 ENST00000494618.1_1_2:232322276-232325237:-|nuORF;;ENST00000461347.5_1_2:232319904-232323320:-|nuORF;;ENSG00000115053|ENST00000322723|NCL 1.31480939189593 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11774 63.344 59.0 1114400.0 25 0 209620.0 + 1334 AKDPHLPQV 9 90 502.7795519614126 1003.5445509896252 2 502.7789184451103 MULTI CID FTMS 0 0 0 11769 838331.0 0.5576112400105692 4 -0.3583145141601562 5 Unmodified _AKDPHLPQV_ REV__ENSG00000196517|ENST00000372310|SLC6A9;REV__nc|ENSG00000196517|P48067-3|SLC6A9;REV__nc|ENSG00000196517|P48067|SLC6A9 21.74664581756881 0.2544899275067181 4 {[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}V 8 -1 + 37.236 0.0 0.0 3.7105 3.7105 66.547 0.0 0.0 0.0 18.50711233356285 2.7432787328411123 2.7432787328411123 1.7878877499903396 0 0.4247425010840047 2.0 0.6747425010840047 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}V;{[QV]|[N{I|L}]|[RA]|[KV]}[PS]H{I|L}[QP]V;{[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}[R{M(Oxidation (M))|F}] 3.7105;3.5323;3.4371 -;-;- 117 + 1 1.316 57732.0 1.0 7042 4730 11769 HBL1_DMSO_200M_050219_2,11774 HBL1_DMSO_200M_050219_2,11774,AKDPHLPQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11775 63.349 276.0 920660.0 25 0 178530.0 + 21096 LPAHSILI 8 162 432.2711661080091 862.5277792828182 2 432.2713195681572 MULTI CID FTMS 0 0 0 11769 795041.3125 0.4555682843824624 -2 0.1383018493652343 6 Unmodified _LPAHSILI_ REV__ENST00000573807.5_1_17:7216077-7216773:-|nuORF 63.393752934501535 0.1160198504584336 4 [YR]SV{I|L}{I|L}{I|L} 7 -1 + 49.856 0.0 0.0 5.7802 5.7802 78.841 0.0 0.0 0.0 4.221675119240516 14.81508216873415 4.221675119240516 4.221675119240516 0 0.3807196863200844 0.0 1.5114393726401687 0.0 [YR]SV{I|L}{I|L}{I|L};[{I|L}P][HA]S{I|L}{I|L}{I|L};[{I|L}P]S[HA]{I|L}{I|L}{I|L};[YR]S{I|L}V{I|L}{I|L};[YR]VS{I|L}{I|L}{I|L};[YR]{I|L}SV{I|L}{I|L};[PS]{I|L}[HA]{I|L}{I|L}{I|L};[HA]PTV{I|L}{I|L}{I|L};[{I|L}P][HA]TV{I|L}{I|L};[YR]VTV{I|L}{I|L} 5.7802;5.2908;5.1642;5.1398;5.1214;5.1117;5.0898;4.7836;4.6504;4.4809 -;+;-;-;-;-;-;-;-;- + 681 1 1.316 196364.2 1.0 7043 4730 11769 HBL1_DMSO_200M_050219_2,11775 HBL1_DMSO_200M_050219_2,11775,LPAHSILI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11776 63.354 269.0 596550.0 25 0 48544.0 + 38966 TVPKPDVVVQV 11 149 590.8507148417667 1179.686876750333 2 590.8516113162041 MULTI CID FTMS 0 0 0 11769 751205.3125 0.852517658520974 2 -0.1830253601074218 7 Unmodified _TVPKPDVVVQV_ ENSG00000067177|ENST00000373542|PHKA1;nc|ENSG00000067177|P46020-2|PHKA1;nc|ENSG00000067177|P46020-3|PHKA1 69.33821966488729 0.0343223916712224 4 [DP]VVVGVAVVQV 12 7 + 51.291 0.0 0.0 4.3478 4.3478 70.931 0.0 0.0 0.0 3.624558361826594 22.131531418060685 3.624558361826594 3.0102999566398125 0 0.8737125054200234 0.6575773191777937 0.7059771852360797 0.0 [DP]VVVGVAVVQV;[DP]VVGVVAVVQV;[DP]VVVGAVVVQV;[DP]VVVRAVVQV;[DP]VVRVAVVQV;[DP]VV[KP]VTVQV;[DP]V[KP]VVTVQV;[KP]V[DP]VVTVQV;[VP]DVVGVAVVQV;[DP]VVGVAVVVQV 4.3478;4.0927;4.0493;4.0425;4.0425;3.9737;3.9737;3.9553;3.8451;3.7941 -;-;-;-;-;-;-;-;-;- 3590 1 1.316 123284.6 1.0 7044 4730 11769 HBL1_DMSO_200M_050219_2,11776 HBL1_DMSO_200M_050219_2,11776,TVPKPDVVVQV True True TVPKPDVVVQV 63.353908 590.851611316204 11730591.0 11769.0 nc|ENSG00000067177|P46020-2|PHKA1;;ENSG00000067177|ENST00000373542|PHKA1;;nc|ENSG00000067177|P46020-3|PHKA1 4.65049409866333 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11777 63.359 306.0 594010.0 25 0 94453.0 + -1 VALVCLAPA 9 168 457.26420380462406 912.513854676048 2 457.2647888064384 MULTI CID FTMS 0 0 0 11769 670049.375 0.535135869570643 6 -0.6077957153320312 8 Carbamidomethyl (C) _VALVC(Carbamidomethyl (C))LAPA_ REV__ENST00000501008.2_1_12:92540095-92540353:+|nuORF 5.230669730166228 0.7320841359114558 4 {[CP]|[EA]}A{I|L} 4 -1 18.724 0.0 0.0 2.0519 0.0 0.0 0.0 525.2758272760374 525.2758272760374 7.97917941072857 0.0 0.0 0.0 0 0.0 0.6020599913279624 0.0 0.0 {[CP]|[EA]}A{I|L} 2.0519 - 359 + 1 1.316 141349.6 1.0 7045 4730 11769 HBL1_DMSO_200M_050219_2,11777 HBL1_DMSO_200M_050219_2,11777,VALVCLAPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11778 63.366 357.0 296480.0 25 0 41692.0 + 39090 TVYTDFDGTRV 11 96 637.3055731232843 1272.5965933133684 2 637.3056518435478 MULTI CID FTMS 0 0 0 11769 455538.8125 0.393454666256547 2 -0.1830253601074218 9 Unmodified _TVYTDFDGTRV_ ENSG00000137193|ENST00000373509|PIM1;ENSG00000198355|ENST00000360612|PIM3;nc|ENSG00000137193|P11309-2|PIM1 28.23362336080872 0.4292685378469897 4 {[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}DV[WK] 10 4 + 70.45 0.0 0.0 5.5359 5.5359 85.418 0.0 0.0 0.0 43.28295703098071 3.0444970792913324 3.0444970792913324 11.26904911127678 0 0.2742275032520141 2.0 0.7742275032520141 0.0 {[TV]|[{I|L}S]}YTD{M(Oxidation (M))|F}DV[WK];{[TV]|[{I|L}S]}YTDG{[RE]|[WV]}VS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}YTDG{[RE]|[WV]}{I|L}[YG];{[TV]|[{I|L}S]}YTDG{[RE]|[WV]}[YG]{I|L};{[TV]|[{I|L}S]}Y{[WS]|[C(Carbamidomethyl (C)){I|L}]}GD[{M(Oxidation (M))|F}V]S{I|L};{[TV]|[{I|L}S]}YV{[CA]|SS}{[RE]|[WV]}VS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}VY{[CA]|SS}{[RE]|[WV]}VS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}Y{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[RE]|[WV]}VS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}YTV[WC(Carbamidomethyl (C))][MT]{I|L};{[TV]|[{I|L}S]}VYT[WC(Carbamidomethyl (C))][MT]{I|L} 5.5359;4.6504;4.083;3.7938;2.9358;2.9024;2.6869;2.6222;2.4498;2.3315 -;-;-;-;-;-;-;-;-;- 572 + 1 1.316 80000.7 1.0 7046 4730 11769 HBL1_DMSO_200M_050219_2,11778 HBL1_DMSO_200M_050219_2,11778,TVYTDFDGTRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11779 63.372 358.0 357020.0 25 0 16261.0 + 23718 LTVADPGGHRV 11 139 561.3088007913716 1120.603048649543 2 561.3091918826103 MULTI CID FTMS 0 0 0 11769 381633.5625 0.7167233776280979 -4 0.3351211547851562 10 Unmodified _LTVADPGGHRV_ REV__ENSG00000154529|ENST00000377561|CNTNAP3B;REV__ENST00000435173.1_9:65585783-65602755:+|nuORF;REV__nc|ENSG00000154529|Q96NU0-2|CNTNAP3B 34.93206674587334 0.2904649469012649 4 SPPVV 5 -1 52.691 0.0 0.0 4.702 0.0 0.0 623.3206654279312 0.0 623.3206654279312 0.0 29.15878117603789 0.0 0.0 0 1.274227503252014 0.0 0.8494850021680094 0.0 SPPVV 4.702 - 2613 1 1.316 104200.7 1.0 7047 4730 11769 HBL1_DMSO_200M_050219_2,11779 HBL1_DMSO_200M_050219_2,11779,LTVADPGGHRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11780 63.379 392.0 547100.0 25 0 56467.0 + 28874 QALGITTKI 9 171 472.79280343410034 943.5710539350008 2 472.7920410037041 MULTI CID FTMS 0 0 0 11769 390867.15625 0.5914972036678102 -2 0.1383018493652343 11 Unmodified _QALGITTKI_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000459899.1_1_14:35857513-35858113:-|nuORF;ENST00000546564.5_1_12:120636605-120638589:-|nuORF;ENST00000548568.5_1_12:120636605-120638589:-|nuORF;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 79.59630418116434 0.0176145593575188 4 [QA]{I|L}G{I|L}TTK{I|L} 9 0 + 85.154 0.0 0.0 9.0247 9.0247 95.125 0.0 0.0 0.0 24.1373427585527 11.627578316815743 11.627578316815743 11.627578316815743 0 1.1989700043360187 1.6989700043360187 0.9258337024346172 0.2302046884880938 + + [QA]{I|L}G{I|L}TTK{I|L};[QA]{I|L}G{I|L}TT{I|L}K;[QA]{I|L}G{I|L}T{I|L}TK;[KG][PS]{I|L}TTK{I|L};[KG][PS]{I|L}TT{I|L}K;{[VA]|[{I|L}G]}TTK{I|L}[QA]{I|L};[KG]KYAHK{I|L};[KG]K{[QN]|[E{I|L}]|[KN]}EK{I|L};[KG]K{[QG]|[NA]}WK{I|L};[KT]T{I|L}G{I|L}[QA]{I|L} 9.0247;7.7924;6.517;3.7689;2.5366;2.245;1.9151;1.5819;1.498;1.4276 +;-;-;-;-;-;-;-;-;- + 1808 + 1 1.316 162747.0 1.0 7048 4730 11769 HBL1_DMSO_200M_050219_2,11780 HBL1_DMSO_200M_050219_2,11780,QALGITTKI True True QALGITTKI 63.379414 472.792041003704 9910498.0 11769.0 ENSG00000089157|ENST00000392514|RPLP0;;nc|ENSG00000213553|Q8NHW5|RPLP0P6;;nc|ENSG00000089157|P05388-2|RPLP0;;ENST00000459899.1_1_14:35857513-35858113:-|nuORF;;ENST00000548568.5_1_12:120636605-120638589:-|nuORF;;ENST00000546564.5_1_12:120636605-120638589:-|nuORF 4.987407843271892 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11781 63.387 439.0 549560.0 25 0 59434.0 -1 0 97 899.4827592275697 0 899.4827148318291 PEAK CID FTMS 0 0 0 11769 351538.71875 0.5281010052812735 -3 0.2351760864257812 12 4 VAP{I|L}VSD 7 -1 23.357 0.0 0.0 1.2998 0.0 0.0 916.4735007776018 196.0734499567016 1112.5469507343034 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1989700043360187 0.0 VAP{I|L}VSD 1.2998 - 1112 + 1 1.316 163146.6 1.0 7049 4730 11769 HBL1_DMSO_200M_050219_2,11781 HBL1_DMSO_200M_050219_2,11781, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11782 63.394 399.0 349470.0 25 0 25416.0 + 32080 RVLPPSALQSV 11 124 583.8482282329863 1165.6819035327726 2 583.8484374880791 MULTI CID FTMS 0 0 0 11769 319896.71875 0.5661275731311841 8 -0.80035400390625 13 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 70.92866715596459 0.0297132693151486 4 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 71.044 0.0 0.0 6.0946 6.0946 85.035 0.0 0.0 0.0 13.842545855587504 44.87331466103669 13.842545855587504 9.128498242810998 0 1.5669015600442575 0.8860566476931632 0.805462187404089 0.0 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[RV]{[CP]|[EA]}QPV{I|L}RV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV;[RV]{I|L}P[PS]RRW;{[DS]|[MA]|[CV]|TT}[RP]QPV{I|L}RV 6.0946;5.3115;3.6321;3.3727;2.8459;2.6668;1.8537 +;-;-;-;-;-;- + 404 1 1.316 106867.6 1.0 7050 4730 11769 HBL1_DMSO_200M_050219_2,11782 HBL1_DMSO_200M_050219_2,11782,RVLPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11783 63.404 468.0 243280.0 25 0 28542.0 + + -1 DAPLGPAL 8 99 753.343481227942 1504.672409522684 2 753.8463622927666 MULTI CID FTMS 0 0 0 11769 275573.5 1.0 0 0.0 14 Oxidation (M) _FEM(Oxidation (M))IREEQDHR_ ENSG00000127528|ENST00000248071|KLF2 2.498486711656943 0.8633599123570009 4 [MN]P 3 -1 24.555 0.0 0.0 1.6319 0.0 0.0 0.0 1159.5121671733275 1159.5121671733275 1.5792850647930656 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.2134679910804404 [MN]P 1.6319 - 277 1 1.316 81528.1 1.0 7051 4730 11769 HBL1_DMSO_200M_050219_2,11783 HBL1_DMSO_200M_050219_2,11783,FEMIREEQDHR False False DAPLGPAL 63.403872 753.846362292767 887452.5625 11769.0 ENSG00000127528|ENST00000248071|KLF2 1.594749351342519 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11784 63.413 491.0 278670.0 25 0 22061.0 + -1 VMMMKMWTMYI 11 99 756.8281976615024 1511.6418423898049 2 756.8256713747978 MULTI CID FTMS 0 0 0 11769 219239.109375 0.3812914999837497 -5 0.3694877624511719 15 3 Oxidation (M) _VM(Oxidation (M))M(Oxidation (M))M(Oxidation (M))KMWTMYI_ REV__ENST00000445215.5_1_22:42995765-42998001:-|nuORF 5.296884461304476 0.8501568894076437 4 ANQQAEDHQ 9 -1 40.099 0.0 0.0 2.6527 0.0 0.0 355.14881694623097 132.04604517154533 487.1948621177763 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 ANQQAEDHQ 2.6527 - 1679 + 1 1.316 101566.2 1.0 7052 4730 11769 HBL1_DMSO_200M_050219_2,11784 HBL1_DMSO_200M_050219_2,11784,VMMMKMWTMYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11785 63.421 475.0 313470.0 25 0 20055.0 + 21619 LPKYTIAPWQV 11 140 658.3716951491117 0 658.3702270388603 PEAK CID FTMS 0 0 0 11769 218331.5 1.0 0 0.0 16 Unmodified _LPKYTIAPWQV_ REV__ENSG00000115548|ENST00000312912|KDM3A 16.149105407346934 0.3934762919021404 4 {I|L}PS 3 -1 21.682 0.0 0.0 1.6492 0.0 0.0 319.11984185896705 695.4119152006177 1014.5317570595848 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 {I|L}PS 1.6492 - 418 + 1 1.316 112337.8 1.0 7053 4730 11769 HBL1_DMSO_200M_050219_2,11785 HBL1_DMSO_200M_050219_2,11785,LPKYTIAPWQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11787 63.425 1.1 53546000.0 25 0 8015800.0 -1 0 62 366.7366575692964 731.4587622053928 2 366.7365905642509 MULTI CID FTMS 0 0 0 11786 55090572.0 1.0 0 0.0 1 4 [{I|L}V]PK{I|L}Y 6 -1 + 46.661 0.0 0.0 6.3791 6.3791 92.205 0.0 0.0 0.0 22.93317531238386 9.041068762088996 9.041068762088996 46.66054693457546 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK{I|L}Y 6.3791 - 29 + 1 1.296 52439.5 1.0 7054 4731 11786 HBL1_DMSO_200M_050219_2,11787 HBL1_DMSO_200M_050219_2,11787, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11788 63.426 22.0 2467400.0 25 0 349780.0 + + 11116 DAFTIKTV 8 76 447.7502995907714 893.4860462483429 2 447.7504455447197 MULTI CID FTMS 0 0 0 11786 2805469.0 0.6393676127497533 1 -0.0945358276367187 2 Unmodified _GEFTIKTV_ ENSG00000115267|ENST00000649979|IFIH1 30.63653989081413 0.3996269429323407 4 [R{M(Oxidation (M))|F}]M{I|L}KTV 7 -1 + 30.75 0.0 0.0 3.4415 3.4415 72.494 0.0 0.0 0.0 2.518119729937993 6.964270827867551 2.518119729937993 6.262874945799766 0 0.0 0.0 0.6505149978319906 0.0 [R{M(Oxidation (M))|F}]M{I|L}KTV;[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}PKTV;[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}T[KP]V;[R{M(Oxidation (M))|F}]T{M(Oxidation (M))|F}[KP]V;[R{M(Oxidation (M))|F}]T[K{I|L}]MV 3.4415;2.7406;0.95179;0.61487;0.27796 -;-;-;-;- 110 + 1 1.296 47009.7 1.0 7055 4731 11786 HBL1_DMSO_200M_050219_2,11788 HBL1_DMSO_200M_050219_2,11788,GEFTIKTV False False DAFTIKTV 63.426261 447.75044554472 65709664.0 11786.0 ENSG00000115267|ENST00000649979|IFIH1 7.168003400166829 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11789 63.427 8.2 4656200.0 25 0 735690.0 + 43630 YALNHTLSV 9 64 509.2710193652375 1016.527485797275 2 509.2708007693291 MULTI CID FTMS 0 0 0 11786 5430249.5 0.3127948950071242 -2 0.1864013671875 3 Unmodified _YALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 26.88365393820708 0.1891292719743517 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}{I|L}S 6 4 28.389 0.0 0.0 2.7928 0.0 0.0 0.0 366.1652781158875 366.1652781158875 7.754537344402905 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}{I|L}S 2.7928 - 125 1 1.296 34093.7 1.0 7056 4731 11786 HBL1_DMSO_200M_050219_2,11789 HBL1_DMSO_200M_050219_2,11789,YALNHTLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11790 63.429 39.0 1619100.0 25 0 317500.0 + 11477 GIIDGSPRL 9 69 464.2666612498578 926.5187695665156 2 464.2667114138603 MULTI CID FTMS 0 0 0 11786 1665225.0 0.8345264342189791 1 -0.0945358276367187 4 Unmodified _GIIDGSPRL_ chr13:46344831-46349286|46|25.39|0.99|4.68|-|ENST00000417405|RUBCNL,RUBCNL;ENSG00000102445|ENST00000429979|RUBCNL;nc|ENSG00000102445|Q9H714-1|RUBCNL;nc|ENSG00000102445|Q9H714-2|RUBCNL;nc|ENSG00000102445|Q9H714-4|RUBCNL 41.8396318013385 0.0653578398400075 4 {[VA]|[{I|L}G]}{I|L}DGS[RP]{I|L} 9 0 + 69.724 0.0 0.0 7.5254 7.5254 88.443 0.0 0.0 0.0 57.94147988737701 2.2968340295234384 2.2968340295234384 7.429928190999398 0 0.9247425010840048 2.0 0.8494850021680094 0.4247425010840047 + + {[VA]|[{I|L}G]}{I|L}DGS[RP]{I|L};{[VA]|[{I|L}G]}{I|L}DG[RP]S{I|L};{[VA]|[{I|L}G]}{I|L}D{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}D{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}[QT][WP];{[VA]|[{I|L}G]}{I|L}[{M(Oxidation (M))|F}E][HV]{I|L};{[VA]|[{I|L}G]}{I|L}[WR][WP];{[VA]|[{I|L}G]}WW[RP]{I|L} 7.5254;6.7235;6.0429;5.718;5.5463;4.6689;4.2625;3.3039 +;-;-;-;-;-;-;- + 179 + 1 1.296 53273.0 1.0 7057 4731 11786 HBL1_DMSO_200M_050219_2,11790 HBL1_DMSO_200M_050219_2,11790,GIIDGSPRL True True GIIDGSPRL 63.428618 464.26671141386 31739186.0 11786.0 nc|ENSG00000102445|Q9H714-2|RUBCNL;;ENSG00000102445|ENST00000429979|RUBCNL;;nc|ENSG00000102445|Q9H714-1|RUBCNL;;chr13:46344831-46349286|46|25.39|0.99|4.68|-|ENST00000417405|RUBCNL,RUBCNL;;nc|ENSG00000102445|Q9H714-4|RUBCNL 5.486410617828369 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11791 63.431 102.0 1065600.0 25 0 245630.0 -1 0 54 1091.7688818220322 3272.284816066297 3 1092.104174792767 MULTI CID FTMS 0 0 0 11786 1500675.875 1.0 0 0.0 5 4 VNT{M(Oxidation (M))|F} 4 -1 23.704 0.0 0.0 0.72439 0.0 0.0 2385.865456790709 422.1705416315063 2808.0359984222155 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.3494850021680094 VNT{M(Oxidation (M))|F} 0.72439 - 194 + 1 1.296 99791.2 1.0 7058 4731 11786 HBL1_DMSO_200M_050219_2,11791 HBL1_DMSO_200M_050219_2,11791, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11792 63.433 100.0 861290.0 25 0 131840.0 + 6538 EALGTALKV 9 114 451.2714577681312 900.5283626030623 2 451.2717162966728 MULTI CID FTMS 0 0 0 11786 829471.5625 0.7146596187640553 -1 0.0884895324707031 6 Unmodified _EALGTALKV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 47.74868867922204 0.0453060283459952 4 {[CP]|[EA]}{I|L}GTA{I|L}KV 9 0 + 50.116 0.0 0.0 5.5652 5.5652 81.568 0.0 0.0 0.0 5.642492736872597 7.481880270062007 5.642492736872597 7.481880270062007 0 0.3807196863200844 0.0 0.9247425010840048 0.1989700043360188 + + {[CP]|[EA]}{I|L}GTA{I|L}KV;{[CP]|[EA]}{I|L}GTA{I|L}VK;{[CP]|[EA]}{I|L}[QT]{I|L}KV;{[CP]|[EA]}{I|L}[QT]{I|L}VK;[TA]G{I|L}{I|L}[VS]{I|L}Q;{[SA]|[TG]}A{I|L}{I|L}[VS]{I|L}Q;[QT]{I|L}{I|L}[VS]{I|L}Q;[VS]K{I|L}AA{I|L}{[CP]|[EA]};[{I|L}A]{[SA]|[TG]}{I|L}[VS]{I|L}Q 5.5652;4.7344;3.962;3.1312;1.7445;1.0676;0.97128;0.44598;0.25013 +;-;-;-;-;-;-;-;- + 514 + 1 1.296 71650.4 1.0 7059 4731 11786 HBL1_DMSO_200M_050219_2,11792 HBL1_DMSO_200M_050219_2,11792,EALGTALKV True True EALGTALKV 63.433007 451.271716296673 18060634.0 11786.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 5.609840393066406 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11793 63.439 353.0 405030.0 25 0 37670.0 + 17867 KQLEETNLQL 10 134 608.3331731696034 1214.6517934060066 2 608.3338500857353 MULTI CID FTMS 0 0 0 11786 496132.3125 0.3594406338523064 2 -0.1661338806152343 7 Unmodified _KQLEETNLQL_ ENSG00000083535|ENST00000326291|PIBF1;nc|ENSG00000083535|Q8WXW3-4|PIBF1 114.20165948288296 0.0011420412450596 4 [Q{I|L}]KEETN{I|L}Q{I|L} 10 2 + 110.92 0.0 0.0 9.1322 9.1322 80.062 0.0 0.0 0.0 0.2526383028192924 16.53212513775344 0.2526383028192924 0.2526383028192924 0 0.6549471895720985 0.5528419686577808 1.7231975075880328 1.7457416651753048 [Q{I|L}]KEETN{I|L}Q{I|L};[AG]{I|L}KEETN{I|L}Q{I|L};[AG]K{I|L}EETN{I|L}Q{I|L};[Q{I|L}]KEETGG{I|L}Q{I|L};[Q{I|L}]KEETN{I|L}[AG]{I|L};[AG]{I|L}KEETGG{I|L}Q{I|L};[AG]{I|L}KEETN{I|L}[AG]{I|L};[Q{I|L}]KETEN{I|L}Q{I|L};[AG]{I|L}KETEN{I|L}Q{I|L};[KQ]{I|L}EETN{I|L}Q{I|L} 9.1322;9.1114;8.5559;8.3777;8.3777;8.3598;8.3598;8.2038;8.183;7.9391 -;-;-;-;-;-;-;-;-;+ + 5523 1 1.296 108634.1 1.0 7060 4731 11786 HBL1_DMSO_200M_050219_2,11793 HBL1_DMSO_200M_050219_2,11793,KQLEETNLQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11794 63.448 460.0 789740.0 25 0 107180.0 40127 VGLIQLGLL 9 234 309.2063002290926 0 309.2062255740166 PEAK CID FTMS 0 0 0 11786 418256.15625 1.0 0 0.0 8 Unmodified _VGLIQLGLL_ ENST00000535414.5_1_1:101339270-101339441:-|nuORF 9.38312468134398 0.3193474221348066 4 MK 2 9 11.256 0.0 0.0 1.826 0.0 0.0 113.08328052870162 241.15657983951408 354.2398603682157 0.0 0.0 0.0 0.0 0 0.6307196863200843 0.0 0.0 0.0 MK 1.826 - 30 + 1 1.296 292171.2 1.0 7061 4731 11786 HBL1_DMSO_200M_050219_2,11794 HBL1_DMSO_200M_050219_2,11794,VGLIQLGLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11795 63.455 392.0 395020.0 25 0 24096.0 + + 30742 ALEEQLQQIRAE 12 139 714.377962552917 1426.741372172634 2 714.3788329958916 MULTI CID FTMS 0 0 0 11786 400321.125 0.762436645022503 -1 0.0884895324707031 9 Unmodified _RGRYNPLEYFI_ ENSG00000186395|ENST00000269576|KRT10;P13645;P02535-1 22.736283301280096 0.5583477779825423 4 [{I|L}A]EEQ{I|L}QQ{I|L}RAE 12 -1 + 138.19 0.0 0.0 9.6858 9.6858 92.681 0.0 0.0 0.0 67.20701183428068 14.904898263063243 14.904898263063243 9.098233696509112 0 3.004432191740108 2.0 1.2311132596518672 2.004432191740108 [{I|L}A]EEQ{I|L}QQ{I|L}RAE;[{I|L}A]EE[AG]{I|L}QQ{I|L}RAE;[{I|L}A]EEQ{I|L}[AG]Q{I|L}RAE;[{I|L}A]EEQ{I|L}Q[AG]{I|L}RAE;[{I|L}A]EEQ{I|L}QRQ{I|L}AE;[{I|L}A]EE[AG]{I|L}[AG]Q{I|L}RAE;[{I|L}A]EE[AG]{I|L}Q[AG]{I|L}RAE;[{I|L}A]EEQ{I|L}[AG][AG]{I|L}RAE;[{I|L}A]EE[AG]{I|L}QRQ{I|L}AE;[{I|L}A]EEQ{I|L}[AG]RQ{I|L}AE 9.6858;9.0481;9.0481;9.0481;8.6764;8.4122;8.4122;8.4122;8.0387;8.0387 -;-;-;-;-;-;-;-;-;- 36665 + 1 1.296 113749.2 1.0 7062 4731 11786 HBL1_DMSO_200M_050219_2,11795 HBL1_DMSO_200M_050219_2,11795,RGRYNPLEYFI False False ALEEQLQQIRAE 63.454582 714.378832995892 4255147.5 11786.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 8.781727155049643 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11796 63.457 96.0 926600.0 25 0 63577.0 + 19687 LGLRPLHQL 9 109 349.5540861262841 1045.6404289790523 3 349.5537902712822 MULTI CID FTMS 0 0 0 11786 405053.625 0.0330230602519317 -7 0.5977859497070312 10 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 38.15118350030904 0.0856056900103839 4 {[VA]|[{I|L}G]}{I|L}E 4 6 34.609 0.0 0.0 3.3099 0.0 0.0 0.0 630.3856417295764 630.3856417295764 18.691577868965155 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}E 3.3099 - 134 + 1 1.296 84091.2 1.0 7063 4731 11786 HBL1_DMSO_200M_050219_2,11796 HBL1_DMSO_200M_050219_2,11796,LGLRPLHQL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11797 63.467 563.0 245330.0 25 0 23853.0 + 41652 VPPSLPSL 8 157 405.2417577717272 808.4689626102544 2 405.2422668337822 MULTI CID FTMS 0 0 0 11786 250093.03125 1.0 0 0.0 11 Unmodified _VPPSLPSL_ REV__ENST00000523812.1_1_8:144357822-144358971:+|nuORF 49.66892048692302 0.1408045912742846 4 [{I|L}P]S[VP]PS{I|L} 8 -1 + 36.742 0.0 0.0 4.5446 4.5446 71.054 0.0 0.0 0.0 6.158775142110283 9.359243171031096 6.158775142110283 2.85409319271119 0 0.5994850021680094 1.6989700043360187 0.6643943297944485 0.0 [{I|L}P]S[VP]PS{I|L};[{I|L}P]P[VS]PS{I|L};[PS]VP{I|L}PS{I|L};[VP]SP{I|L}PS{I|L};[PS]VP[PS]{I|L}{I|L};[VP]PS{I|L}PS{I|L};[VP]SP[PS]{I|L}{I|L};{[TV]|[{I|L}S]}P[VP]PS{I|L};[VP]PS[PS]{I|L}{I|L};{[HG]|PP}VS{I|L}PS{I|L} 4.5446;4.1916;3.4508;3.135;3.1257;2.9172;2.81;2.6829;2.5922;1.9243 -;-;-;-;-;+;-;-;-;- + 358 1 1.296 109540.0 1.0 7064 4731 11786 HBL1_DMSO_200M_050219_2,11797 HBL1_DMSO_200M_050219_2,11797,VPPSLPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11798 63.476 566.0 253520.0 25 0 74484.0 + 23767 LVAPKVVP 8 142 411.7748679190816 821.5351829049632 2 411.7750732302666 MULTI CID FTMS 0 0 0 11786 246191.03125 0.512216626945199 -2 0.1864013671875 12 Unmodified _LVAPKVVP_ REV__ENSG00000130699|ENST00000252996|TAF4;REV__ENST00000436129.2_1_20:60551226-60583162:-|nuORF 2.889219685676258 0.8067950007271085 4 {I|L} 1 -1 9.5329 0.0 0.0 1.1604 0.0 0.0 690.4397982387508 0.0 690.4397982387508 0.0 0.8092540997053543 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1604 + + 39 + 1 1.296 114502.9 1.0 7065 4731 11786 HBL1_DMSO_200M_050219_2,11798 HBL1_DMSO_200M_050219_2,11798,LVAPKVVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11799 63.485 478.0 432670.0 25 0 35126.0 -1 SLNEQMYTR 9 181 579.2669509042177 0 579.2677490115166 PEAK CID FTMS 0 0 0 11786 189784.546875 0.9601552758967664 -1 0.0884895324707031 13 Oxidation (M) _SLNEQM(Oxidation (M))YTR_ ENSG00000067066|ENST00000340126|SP100;ENST00000494901.5_1_2:231375770-231407658:+|nuORF 16.149105407346934 0.2417352846137613 4 NE 2 -1 10.635 0.0 0.0 0.91954 0.0 0.0 200.106624460166 710.3012033513805 910.4078278115464 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.3054621874040891 NE 0.91954 + + 226 + 1 1.296 156079.8 1.0 7066 4731 11786 HBL1_DMSO_200M_050219_2,11799 HBL1_DMSO_200M_050219_2,11799,SLNEQMYTR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11800 63.494 516.0 327970.0 25 0 22275.0 + 16272 IVVDNVPQV 9 182 491.7810798622144 981.5476067912288 2 491.7814514040947 MULTI CID FTMS 0 0 0 11786 213713.890625 1.0 0 0.0 14 Unmodified _IVVDNVPQV_ ENSG00000106263|ENST00000360876|EIF3B;nc|ENSG00000106263|P55884-2|EIF3B 48.345845343767074 0.0439967357579942 4 [{I|L}V]NDVV 6 4 47.159 0.0 0.0 4.8045 0.0 0.0 0.0 339.1642363379871 339.1642363379871 23.04113429432412 0.0 0.0 0.0 0 0.5 2.0 0.0 1.055462187404089 [{I|L}V]NDVV 4.8045 - 1647 1 1.296 126390.6 1.0 7067 4731 11786 HBL1_DMSO_200M_050219_2,11800 HBL1_DMSO_200M_050219_2,11800,IVVDNVPQV True True IVVDNVPQV 63.493999 491.781451404095 1037504.25 11786.0 nc|ENSG00000106263|P55884-2|EIF3B;;ENSG00000106263|ENST00000360876|EIF3B 5.381413618723552 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11801 63.504 523.0 790310.0 25 0 64567.0 + 19691 LGLRPLHQL 9 230 523.8263267544773 1045.6381005757546 2 523.8273193240166 MULTI CID FTMS 0 0 0 11786 157032.78125 0.0442356018173374 -7 0.5977859497070312 15 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 71.13359017698441 0.0206607516130725 4 {I|L}G{I|L}[HK]D 6 5 58.031 0.0 0.0 5.5499 0.0 0.0 0.0 379.2483309381469 379.2483309381469 42.06228073223493 0.0 0.0 0.0 0 0.6307196863200843 1.6989700043360187 0.9698565171985376 0.75 {I|L}G{I|L}[HK]D 5.5499 - 2289 + 1 1.296 329438.4 1.0 7068 4731 11786 HBL1_DMSO_200M_050219_2,11801 HBL1_DMSO_200M_050219_2,11801,LGLRPLHQL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11802 63.515 638.0 326690.0 25 0 37057.0 + 38103 TPLFSRYYSQ 10 145 421.2112245956084 1260.6118443870253 3 421.5451232790947 MULTI CID FTMS 0 0 0 11786 132232.921875 1.0 0 0.0 16 Unmodified _TPLFSRYYSQ_ REV__ENST00000471981.1_1_1:168195317-168198926:+|nuORF 14.838274106304384 0.5985701837916485 4 Y{I|L} 2 -1 29.05 0.0 0.0 2.3044 0.0 0.0 0.0 981.44244422874 981.44244422874 -1.3669664073588912 0.0 -1.3669664073588912 0.0 0 0.0 0.958607314841775 0.0 0.0 Y{I|L} 2.3044 - 865 + 1 1.296 167608.2 1.0 7069 4731 11786 HBL1_DMSO_200M_050219_2,11802 HBL1_DMSO_200M_050219_2,11802,TPLFSRYYSQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11804 63.52 0.49 85171000.0 25 0 6761800.0 + 27898 PLSPLFLPL 9 69 498.8081792005347 995.6018054678694 2 498.8088561892509 MULTI CID FTMS 0 0 0 11803 98986560.0 0.3736070265412046 5 -0.47174072265625 1 Unmodified _PLSPLFLPL_ REV__ENST00000314940.6_1_5:137089877-137089988:-|nuORF 42.09456458481378 0.0639583784996157 4 {I|L}PSP{I|L}[KQ]T{I|L} 9 -1 + 58.795 0.0 0.0 5.9055 5.9055 90.633 0.0 0.0 0.0 11.796058402355456 4.314178132293449 4.314178132293449 58.79547504202165 0 1.1237125054200234 1.5228787452803376 0.4247425010840047 0.0 {I|L}PSP{I|L}[KQ]T{I|L} 5.9055 - 357 + 1 1.278 36400.3 1.0 7070 4732 11803 HBL1_DMSO_200M_050219_2,11804 HBL1_DMSO_200M_050219_2,11804,PLSPLFLPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11805 63.521 0.89 59829000.0 25 0 8510200.0 24036 LWALLVYNA 9 60 531.8007617129515 1061.586970492703 2 531.8012573122978 MULTI CID FTMS 0 0 0 11803 63610592.0 0.8625911699258143 -1 0.0945358276367187 2 Unmodified _LWALLVYNA_ ENSG00000112414|ENST00000367609|ADGRG6;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6 24.67388899826682 0.2172451872415813 4 VVY{[QG]|[NA]} 5 5 31.466 0.0 0.0 2.964 0.0 0.0 497.2974719029153 0.0 497.2974719029153 0.0 21.00833760139686 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 VVY{[QG]|[NA]} 2.964 - 27 1 1.278 47230.0 1.0 7071 4732 11803 HBL1_DMSO_200M_050219_2,11805 HBL1_DMSO_200M_050219_2,11805,LWALLVYNA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11806 63.522 2.8 14538000.0 25 0 1575800.0 + 32325 RYIPTAAAF 9 56 505.2767917760186 1008.5390306188372 2 505.2769653201103 MULTI CID FTMS 0 0 0 11803 17695806.0 0.99587564744445 1 -0.0715980529785156 3 Unmodified _RYIPTAAAF_ ENSG00000058262|ENST00000243253|SEC61A1;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;nc|ENSG00000058262|P61619-3|SEC61A1;nc|ENSG00000065665|Q9H9S3-3|SEC61A2 27.628801355627647 0.1796483985696185 4 AAA{M(Oxidation (M))|F} 4 5 40.433 0.0 0.0 4.0091 0.0 0.0 630.35063368965 0.0 630.35063368965 0.0 30.96910013008056 0.0 0.0 0 1.0 0.0 0.0 0.0 + AAA{M(Oxidation (M))|F} 4.0091 + + 15 1 1.278 37103.2 1.0 7072 4732 11803 HBL1_DMSO_200M_050219_2,11806 HBL1_DMSO_200M_050219_2,11806,RYIPTAAAF False True RYIPTAAAF 63.521973 505.27696532011 350183680.0 11803.0 ENSG00000065665|ENST00000298428|SEC61A2;;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;;nc|ENSG00000065665|Q9H9S3-3|SEC61A2;;nc|ENSG00000058262|P61619-3|SEC61A1;;ENSG00000058262|ENST00000243253|SEC61A1 7.605269273122151 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11807 63.523 5.1 7103800.0 25 0 902600.0 -1 PVYQRCVTL 9 64 568.2990882343107 1134.583623535421 2 568.2997924685478 MULTI CID FTMS 0 0 0 11803 10778029.0 0.9233336968518072 -1 0.0945358276367187 4 Carbamidomethyl (C) _PVYQRC(Carbamidomethyl (C))VTL_ ENSG00000105576|ENST00000425528|TNPO2;nc|ENSG00000105576|O14787-2|TNPO2 4.75600775471527 0.7486543447549536 4 [VP]SG{M(Oxidation (M))|F}V{I|L}T 8 -1 26.068 0.0 0.0 2.2976 0.0 0.0 0.0 331.14451155715886 331.14451155715886 14.07821281369209 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 [VP]SG{M(Oxidation (M))|F}V{I|L}T 2.2976 - 96 1 1.278 32164.3 1.0 7073 4732 11803 HBL1_DMSO_200M_050219_2,11807 HBL1_DMSO_200M_050219_2,11807,PVYQRCVTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11808 63.524 6.9 9033300.0 25 0 1991900.0 + 42859 VVLGPPAA 8 56 362.2226728312141 722.4307927292282 2 362.2224609255791 MULTI CID FTMS 0 0 0 11803 9400859.0 0.7454370141473396 -1 0.0945358276367187 5 Unmodified _VVLGPPAA_ REV__ENST00000468758.1_1_2:134877558-135010718:+|nuORF;REV__ENST00000481801.5_1_2:134877633-135011843:+|nuORF 0.0 0.8243325171867699 4 {I|L} 1 -1 0.3786 0.0 0.0 0.052407 0.0 0.0 432.2420853091094 174.08635889224846 606.3284442013579 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.052407 + + 1 + 1 1.278 56587.9 1.0 7074 4732 11803 HBL1_DMSO_200M_050219_2,11808 HBL1_DMSO_200M_050219_2,11808,VVLGPPAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11809 63.526 12.0 3527200.0 25 0 333780.0 + 44524 YPDRNLPTI 9 66 544.7894064442501 1087.5642599553 2 544.7906982302666 MULTI CID FTMS 0 0 0 11803 4096108.0 0.901969449893516 -2 0.1830253601074218 6 Unmodified _YPDRNLPTI_ ENSG00000115539|ENST00000264254|PDCL3 51.41523569358685 0.0372669606867193 4 [TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}YPT{I|L} 9 4 + 45.428 0.0 0.0 4.177 4.177 69.353 0.0 0.0 0.0 2.569619513137056 7.226978824635566 2.569619513137056 2.569619513137056 0 0.8807196863200843 1.154901959985743 0.0 0.0 [TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}YPT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RD]N{I|L}PT{I|L};[TP][W{M(Oxidation (M))|F}]N{I|L}PT{I|L};[TP]{I|L}QQYPE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RD]NP{I|L}T{I|L};[TP][W{M(Oxidation (M))|F}]NP{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RD]GG{I|L}PT{I|L};[TP][W{M(Oxidation (M))|F}]GG{I|L}PT{I|L};[TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[TP]{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RD]GGP{I|L}T{I|L} 4.177;3.9408;3.9003;3.2053;3.2042;3.1637;3.0941;3.0536;2.4032;2.3576 -;+;-;-;-;-;-;-;-;- + 259 1 1.278 39078.5 1.0 7075 4732 11803 HBL1_DMSO_200M_050219_2,11809 HBL1_DMSO_200M_050219_2,11809,YPDRNLPTI True True YPDRNLPTI 63.525511 544.790698230267 358083264.0 11803.0 ENSG00000115539|ENST00000264254|PDCL3 6.099091529846191 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11810 63.527 21.0 1892700.0 25 0 245810.0 -1 0 50 603.9677535467044 1808.8814312403133 3 603.9680053591728 MULTI CID FTMS 0 0 0 11803 2140959.25 0.7339948326260227 2 -0.1752891540527343 7 4 {M(Oxidation (M))|F}{I|L}H{I|L}Q 5 -1 43.756 0.0 0.0 2.4189 0.0 0.0 1152.5181141584 0.0 1152.5181141584 0.0 27.557809497117844 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}H{I|L}Q 2.4189 - 32 1 1.278 37828.8 1.0 7076 4732 11803 HBL1_DMSO_200M_050219_2,11810 HBL1_DMSO_200M_050219_2,11810, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11811 63.528 30.0 1833200.0 25 0 298160.0 + 38895 TVLDKTLSV 9 86 488.2901030311975 974.565653129195 2 488.2902404665947 MULTI CID FTMS 0 0 0 11803 1953890.75 1.0 0 0.0 8 Unmodified _TVLDKTLSV_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 32.78568957990786 0.1150597335874693 4 {[TV]|[{I|L}S]}[VG]T{I|L}VS{[TV]|[{I|L}S]} 10 5 + 44.671 0.0 0.0 4.5837 4.5837 66.231 0.0 0.0 0.0 6.034087492996392 12.781512503836437 6.034087492996392 0.1230450566754512 0 0.5 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}[VG]T{I|L}VS{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[VG]T{I|L}SV{[TV]|[{I|L}S]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}T{I|L}VS{[TV]|[{I|L}S]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}T{I|L}SV{[TV]|[{I|L}S]};[HA]PV{I|L}[RP]SV;{[QD]|[EN]|[WG]|[KD]|[RS]}[RV]VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[K{I|L}]V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.5837;4.571;2.7302;2.7176;2.3455;1.1671;0.85819 -;-;-;-;-;-;- 268 1 1.278 48043.2 1.0 7077 4732 11803 HBL1_DMSO_200M_050219_2,11811 HBL1_DMSO_200M_050219_2,11811,TVLDKTLSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11812 63.529 26.0 2005300.0 25 0 295840.0 + 5981 DQYPYLKSV 9 81 556.7850630269745 1111.555573120749 2 556.7850829958916 MULTI CID FTMS 0 0 0 11803 1806525.25 0.8735924233297659 -1 0.0945358276367187 9 Unmodified _DQYPYLKSV_ ENSG00000147872|ENST00000276914|PLIN2;ENST00000472715.1_1_9:19126103-19127487:-|nuORF;ENST00000475923.1_1_9:19126103-19126313:-|nuORF 38.61474834105838 0.0830609365873449 4 VSK{I|L}QN 6 8 43.761 0.0 0.0 3.9369 0.0 0.0 424.1572099389114 0.0 424.1572099389114 0.0 0.4015713814591848 0.0 0.0 0 0.0 0.0 0.0 0.5 VSK{I|L}QN 3.9369 - 164 + 1 1.278 45214.7 1.0 7078 4732 11803 HBL1_DMSO_200M_050219_2,11812 HBL1_DMSO_200M_050219_2,11812,DQYPYLKSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11813 63.53 28.0 1188100.0 25 0 60901.0 + 25842 NLDPCVIPVM 10 65 550.7759318080549 1099.5373106829095 2 550.7759887576103 MULTI CID FTMS 0 0 0 11803 1566344.75 0.8310771142503395 2 -0.1752891540527343 10 Unmodified _NLDPCVIPVM_ REV__ENST00000510531.5_1_5:6644946-6645183:+|nuORF 14.838274106304384 0.5985701837916485 4 {[QV]|[N{I|L}]|[RA]|[KV]}{[QG]|[NA]}E 5 -1 14.717 0.0 0.0 1.3385 0.0 0.0 0.0 555.2551811265222 555.2551811265222 0.9172432309266992 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{[QG]|[NA]}E 1.3385 - 36 1 1.278 31311.0 1.0 7079 4732 11803 HBL1_DMSO_200M_050219_2,11813 HBL1_DMSO_200M_050219_2,11813,NLDPCVIPVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11814 63.531 28.0 1861000.0 25 0 119310.0 + 9821 FPDPNVKYV 9 77 539.7824019990643 1077.5502510649285 2 539.7818481326103 MULTI CID FTMS 0 0 0 11803 1370038.375 0.3956950380004617 -5 0.4182014465332031 11 Unmodified _FPDPNVKYV_ ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF 45.69961567697781 0.0497987121815769 4 [DP]NVP{M(Oxidation (M))|F}KYV 9 4 + 36.887 0.0 0.0 3.4232 3.4232 76.534 0.0 0.0 0.0 8.32563782453214 4.454525849516443 4.454525849516443 9.208187539523752 0 0.9876954943324544 1.0969100130080565 0.0 0.0 [DP]NVP{M(Oxidation (M))|F}KYV;[DP]GGVP{M(Oxidation (M))|F}KYV;[NP]VDP{M(Oxidation (M))|F}KYV;YYVP{M(Oxidation (M))|F}KYV;[NP]DVP{M(Oxidation (M))|F}KYV;[DP]{I|L}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}KYV 3.4232;2.5687;2.5212;2.0834;1.9625;1.6192 -;-;-;-;-;- 212 1 1.278 47059.1 1.0 7080 4732 11803 HBL1_DMSO_200M_050219_2,11814 HBL1_DMSO_200M_050219_2,11814,FPDPNVKYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11815 63.533 36.0 728200.0 25 0 50043.0 + -1 DAMKYTIVV 9 70 528.2751655103707 1054.5357780875413 2 528.2770263552666 MULTI CID FTMS 0 0 0 11803 880344.125 0.2169519434745664 4 -0.4247703552246094 12 Oxidation (M) _DAM(Oxidation (M))KYTIVV_ nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A;ENSG00000152234|ENST00000398752|ATP5F1A 24.020572477871973 0.2255576514309169 4 T{I|L}VV 4 -1 24.693 0.0 0.0 2.3416 0.0 0.0 624.2589588849625 0.0 624.2589588849625 0.0 8.239087409443187 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 T{I|L}VV 2.3416 + + 21 1 1.278 31277.3 1.0 7081 4732 11803 HBL1_DMSO_200M_050219_2,11815 HBL1_DMSO_200M_050219_2,11815,DAMKYTIVV False False DAMKYTIVV 63.532582 528.277026355267 78100576.0 11803.0 nc|ENSG00000152234|P25705-2|ATP5F1A;;nc|ENSG00000152234|P25705-3|ATP5F1A;;ENSG00000152234|ENST00000398752|ATP5F1A 4.543988068898519 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11816 63.535 120.0 868660.0 25 0 134030.0 + 44608 YPFKPPKI 8 106 330.5324354067559 988.5754768204677 3 330.5323364138603 MULTI CID FTMS 0 0 0 11803 511581.1875 0.046844138938086 -22 2.007041931152344 13 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 47.899 0.0 0.0 4.8453 4.8453 80.819 0.0 0.0 0.0 24.254286129216247 5.810935890735216 5.810935890735216 9.208187539523747 0 0.0 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 4.8453;3.9138 +;- + 147 + 1 1.278 91792.3 1.0 7082 4732 11803 HBL1_DMSO_200M_050219_2,11816 HBL1_DMSO_200M_050219_2,11816,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11817 63.542 384.0 594250.0 25 0 67270.0 -1 0 114 905.4488231306352 1808.88309332807 2 905.4449340701104 MULTI CID FTMS 0 0 0 11803 500299.59375 0.917021818923328 2 -0.1752891540527343 14 4 H{I|L}PN{I|L}NEEA[H{I|L}]VAA 14 -1 91.439 0.0 0.0 5.055 0.0 0.0 0.0 297.08930383853755 297.08930383853755 43.12165157418117 0.0 0.0 0.0 0 1.5356668758921828 1.6989700043360187 0.0 0.4247425010840047 H{I|L}PN{I|L}NEEA[H{I|L}]VAA 5.055 - 6749 + 1 1.278 153953.1 1.0 7083 4732 11803 HBL1_DMSO_200M_050219_2,11817 HBL1_DMSO_200M_050219_2,11817, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11818 63.549 402.0 488480.0 25 0 87832.0 + 5007 DGVAVLKV 8 133 400.7476985190406 799.4808441048813 2 400.7475463747978 MULTI CID FTMS 0 0 0 11803 458606.03125 0.0941691135221865 4 -0.4247703552246094 15 Unmodified _DGVAVLKV_ ENSG00000144381|ENST00000388968|HSPD1;ENST00000388966.4_1_12:8169981-8170332:-|nuORF;ENST00000530524.1_1_8:7748917-7749049:-|nuORF 67.34385681178166 0.1158486345035644 4 [DG]VAV{I|L}KV 8 0 [DG]V + + 41.37 21.452 7.9126 5.1746 5.1746 53.253 0.0 0.0 0.0 0.0 19.917665879116623 0.0 0.0 0 1.066901560044258 0.0 0.0 0.2742275032520141 + + [DG]VAV{I|L}KV 5.1746 + + 152 + 1 1.278 157355.5 1.0 7084 4732 11803 HBL1_DMSO_200M_050219_2,11818 HBL1_DMSO_200M_050219_2,11818,DGVAVLKV True True DGVAVLKV 63.54918 400.747546374798 74310776.0 11803.0 ENST00000388966.4_1_12:8169981-8170332:-|nuORF;;ENST00000530524.1_1_8:7748917-7749049:-|nuORF;;ENSG00000144381|ENST00000388968|HSPD1 5.4251077969868975 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11819 63.557 419.0 453960.0 25 0 34126.0 + 5945 DQHPTQLRY 9 163 579.2905950355455 1156.566637137891 2 579.2922241091728 MULTI CID FTMS 0 0 0 11803 265862.5625 1.0 0 0.0 16 Unmodified _DQHPTQLRY_ REV__ENST00000448100.6_1_20:62366108-62366162:+|nuORF 14.838274106304384 0.4350285940865338 4 {[TV]|[{I|L}S]}N{[QS]|[NT]}EVPV{[QG]|[NA]} 11 -1 + 33.866 0.0 0.0 2.9282 2.9282 65.835 0.0 0.0 0.0 2.5793745709594305 7.367585652254185 2.5793745709594305 2.5793745709594305 0 0.4247425010840047 1.6989700043360187 0.2742275032520141 0.0 {[TV]|[{I|L}S]}N{[QS]|[NT]}EVPV{[QG]|[NA]};[VP][W{M(Oxidation (M))|F}]EVPV{[QG]|[NA]};{[TV]|[{I|L}S]}[HQ]{I|L}[{M(Oxidation (M))|F}E]V{[QG]|[NA]};[EP][R{M(Oxidation (M))|F}]EVPV{[QG]|[NA]};{[TV]|[{I|L}S]}GG{[QS]|[NT]}EVPV{[QG]|[NA]};{[TV]|[{I|L}S]}[HQ]{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}{[QG]|[NA]};{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}{[QN]|[E{I|L}]|[KN]}PPV{[QG]|[NA]};[VP]AY{[ET]|[MV]}PPV{[QG]|[NA]};{[VA]|[{I|L}G]}PY{[ET]|[MV]}PPV{[QG]|[NA]};{[VA]|[{I|L}G]}GS{[QS]|[NT]}EVPV{[QG]|[NA]} 2.9282;2.7051;2.2978;2.2622;2.1389;2.1296;2.0542;1.9371;1.8123;1.6183 -;-;-;-;-;-;-;-;-;- 1239 1 1.278 144007.1 1.0 7085 4732 11803 HBL1_DMSO_200M_050219_2,11819 HBL1_DMSO_200M_050219_2,11819,DQHPTQLRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11820 63.565 452.0 436760.0 25 0 110920.0 + 4512 DAYKKQFSQYI 11 131 695.8532490468734 1389.6919451605468 2 695.8528320193291 MULTI CID FTMS 0 0 0 11803 263838.40625 0.9275559005747162 -1 0.0945358276367187 17 Unmodified _DAYKKQFSQYI_ ENSG00000122406|ENST00000370321|RPL5;ENST00000434805.1_1_1:35816564-35817152:+|nuORF;ENST00000480199.1_1_8:28157565-28157883:+|nuORF 55.24861242081279 0.0885632729458983 4 {[DA]|[EG]}YKKQ{M(Oxidation (M))|F}SQY{I|L} 11 0 + 57.941 0.0 0.0 4.1694 4.1694 77.274 0.0 0.0 0.0 9.208187539523747 14.190166918179637 9.208187539523747 9.128498242811013 0 1.3935078169319297 1.5228787452803376 0.2396518287104437 0.3252574989159953 + + {[DA]|[EG]}YKKQ{M(Oxidation (M))|F}SQY{I|L};{[DA]|[EG]}YKKQ{M(Oxidation (M))|F}S[AG]Y{I|L};{[DA]|[EG]}YKK[AG]{M(Oxidation (M))|F}SQY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DKKQ{M(Oxidation (M))|F}SQY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DKKQ{M(Oxidation (M))|F}S[AG]Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DKK[AG]{M(Oxidation (M))|F}SQY{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QS{M(Oxidation (M))|F}QKKDC{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NQSQY{I|L};[WY]K[W{M(Oxidation (M))|F}]V[VS]Y{I|L};[YK]WKQ{M(Oxidation (M))|F}SQY{I|L} 4.1694;3.5125;3.5125;3.5067;2.8499;2.8499;2.6279;2.4204;2.225;2.0681 +;-;-;-;-;-;-;-;-;- + 979 1 1.278 143532.7 1.0 7086 4732 11803 HBL1_DMSO_200M_050219_2,11820 HBL1_DMSO_200M_050219_2,11820,DAYKKQFSQYI True True DAYKKQFSQYI 63.564686 695.852832019329 2231973.0 11803.0 ENST00000480199.1_1_8:28157565-28157883:+|nuORF;;ENST00000434805.1_1_1:35816564-35817152:+|nuORF;;ENSG00000122406|ENST00000370321|RPL5 6.8285675048828125 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11821 63.572 433.0 405050.0 25 0 41084.0 + 26669 NYIEGTKML 9 189 534.7723036613658 1067.5300543895314 2 534.7739745974541 MULTI CID FTMS 0 0 0 11803 256962.21875 0.0450636229254642 5 -0.47174072265625 18 Unmodified _NYIEGTKML_ ENSG00000133313|ENST00000324262|CNDP2;nc|ENSG00000133313|Q96KP4-2|CNDP2 34.40172386719151 0.1061884637610825 4 [YN]{I|L}E 4 5 38.773 0.0 0.0 3.632 0.0 0.0 0.0 545.2773531549436 545.2773531549436 14.553083118128988 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + [YN]{I|L}E 3.632 + + 2129 + 1 1.278 135362.7 1.0 7087 4732 11803 HBL1_DMSO_200M_050219_2,11821 HBL1_DMSO_200M_050219_2,11821,NYIEGTKML True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11822 63.576 175.0 457000.0 25 0 45606.0 15147 INVTRQQV 8 124 479.2778350048229 956.541117076446 2 479.2765380740166 MULTI CID FTMS 0 0 0 11803 282033.46875 0.2209957429086268 8 -0.8076286315917969 19 Unmodified _INVTRQQV_ ENSG00000156687|ENST00000404895|UNC5D;nc|ENSG00000156687|Q6UXZ4-2|UNC5D 13.50788311687929 0.7113601687236069 4 V 1 7 11.99 0.0 0.0 1.2534 0.0 0.0 839.4615328863076 0.0 839.4615328863076 0.0 2.525749891599532 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2534 + + 127 + 1 1.278 63829.4 1.0 7088 4732 11803 HBL1_DMSO_200M_050219_2,11822 HBL1_DMSO_200M_050219_2,11822,INVTRQQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11823 63.587 577.0 283790.0 25 0 27721.0 + 32650 SCFANCYL 8 184 460.685534595887 919.356516258574 2 460.6859619021416 MULTI CID FTMS 0 0 0 11803 151803.9375 0.6551697977470625 2 -0.1752891540527343 20 Unmodified _SCFANCYL_ REV__ENSG00000123473|ENST00000371877|STIL;REV__nc|ENSG00000123473|Q15468|STIL 12.531546534597751 0.7257836412119636 4 {[TV]|[{I|L}S]}MK{M(Oxidation (M))|F}{I|L} 6 -1 37.981 0.0 0.0 4.1312 0.0 0.0 0.0 196.93541743965287 196.93541743965287 20.018020621344128 0.0 0.0 0.0 0 0.0 2.0 0.8807196863200843 0.0 {[TV]|[{I|L}S]}MK{M(Oxidation (M))|F}{I|L} 4.1312 - 646 1 1.278 128958.7 1.0 7089 4732 11803 HBL1_DMSO_200M_050219_2,11823 HBL1_DMSO_200M_050219_2,11823,SCFANCYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11825 63.591 40.0 1086600.0 25 0 99503.0 + 32207 RVVDLLNQA 9 78 514.2980570221921 1026.581561111184 2 514.2981445193291 MULTI CID FTMS 0 0 0 11824 593379.75 0.7915347313722371 1 -0.1036911010742187 1 Unmodified _RVVDLLNQA_ ENSG00000125755|ENST00000245934|SYMPK;nc|ENSG00000125755|Q92797-2|SYMPK 15.248480904072842 0.4239247793462406 4 {[CP]|[EA]}[R{I|L}]{I|L}{I|L}N[QA] 9 4 + 28.688 0.0 0.0 2.7945 2.7945 72.098 0.0 0.0 0.0 0.9151498112134996 12.785371682087218 0.9151498112134996 7.403626894942441 0 0.555462187404089 0.0 0.0 0.0 {[CP]|[EA]}[R{I|L}]{I|L}{I|L}N[QA];[VP][{I|L}T][TA]{I|L}N[QA];{[CP]|[EA]}[R{I|L}]{I|L}{I|L}GG[QA];[PS]{I|L}{I|L}[TA]{I|L}N[QA] 2.7945;2.0734;1.8976;1.3111 -;-;-;- 105 1 1.263 44338.0 1.0 7090 4733 11824 HBL1_DMSO_200M_050219_2,11825 HBL1_DMSO_200M_050219_2,11825,RVVDLLNQA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11826 63.601 568.0 211850.0 25 0 20673.0 + 21157 LPASPLPDR 9 160 483.27306338820415 964.5315738432084 2 483.2733642458916 MULTI CID FTMS 0 0 0 11824 83337.8125 0.3896983422027562 4 -0.4001426696777344 2 Unmodified _LPASPLPDR_ REV__ENSG00000224109|ENST00000417339|CENPVL3 16.942295170755138 0.3780752226737986 4 [{I|L}A]G 3 -1 15.686 0.0 0.0 1.6263 0.0 0.0 0.0 720.365456860063 720.365456860063 3.212112250009655 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}A]G 1.6263 - 341 1 1.263 93378.8 1.0 7091 4733 11824 HBL1_DMSO_200M_050219_2,11826 HBL1_DMSO_200M_050219_2,11826,LPASPLPDR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11827 63.603 42.0 1137700.0 25 0 102240.0 + 35119 RVVDLLNQA 9 89 514.2638732930296 1026.5131936528592 2 514.2639648318291 MULTI CID FTMS 0 0 0 11824 753349.0625 1.0 0 0.0 3 Unmodified _SQWQSPPVV_ nc|ENSG00000125755|Q92797-2|SYMPK;ENSG00000125755|ENST00000245934|SYMPK 17.11289562659939 0.3734572693229295 4 {[C(Carbamidomethyl (C))G]|[NC]}N{I|L}{I|L} 5 9 22.218 0.0 0.0 2.1645 0.0 0.0 0.0 466.2433743291216 466.2433743291216 4.81045001851292 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))G]|[NC]}N{I|L}{I|L} 2.1645 - 94 + 1 1.263 47545.2 1.0 7092 4733 11824 HBL1_DMSO_200M_050219_2,11827 HBL1_DMSO_200M_050219_2,11827,SQWQSPPVV False True RVVDLLNQA 63.602615 514.263964831829 13644017.0 11824.0 nc|ENSG00000125755|Q92797-2|SYMPK;;ENSG00000125755|ENST00000245934|SYMPK 5.59523359934489 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11828 63.61 402.0 358610.0 25 0 76920.0 + 32034 RVIMPSGLEPA 11 114 585.3213031002289 1168.6280532672577 2 585.3212768435478 MULTI CID FTMS 0 0 0 11824 386406.25 0.6365895071103418 -1 0.0715980529785156 4 Unmodified _RVIMPSGLEPA_ ENST00000377459.2_1_6:27114971-27115085:+|nuORF 26.020703789607367 0.4812285719068541 4 [DV]T{I|L}G[PS]M 8 8 42.44 0.0 0.0 3.6316 0.0 0.0 0.0 365.2314738458535 365.2314738458535 27.61043047615676 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 [DV]T{I|L}G[PS]M 3.6316 - 254 + 1 1.263 113103.3 1.0 7093 4733 11824 HBL1_DMSO_200M_050219_2,11828 HBL1_DMSO_200M_050219_2,11828,RVIMPSGLEPA False True RVIMPSGLEPA 63.609808 585.321276843548 5913206.0 11824.0 ENST00000377459.2_1_6:27114971-27115085:+|nuORF 6.562588373819987 2.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11829 63.618 451.0 276190.0 25 0 36787.0 + 15557 IPYDAKTIQTI 11 133 631.8542968434573 0 631.8536865115166 PEAK CID FTMS 0 0 0 11824 294057.53125 1.0 0 0.0 5 Unmodified _IPYDAKTIQTI_ ENSG00000133739|ENST00000360375|LRRCC1;nc|ENSG00000133739|Q9C099-2|LRRCC1 125.65618451087089 2.818186855953227e-18 4 PY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[SA]|[TG]}QT 9 5 52.23 0.0 0.0 4.1396 0.0 0.0 113.07974001561168 128.07222925357658 241.15196926918827 0.0 0.0 0.0 0.0 0 1.798455006504028 0.0 1.7803695511246984 0.8703715150305282 PY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[SA]|[TG]}QT 4.1396 - 3252 + 1 1.263 97578.2 1.0 7094 4733 11824 HBL1_DMSO_200M_050219_2,11829 HBL1_DMSO_200M_050219_2,11829,IPYDAKTIQTI True True IPYDAKTIQTI 63.617829 631.853686511517 3803254.5 11824.0 ENSG00000133739|ENST00000360375|LRRCC1;;nc|ENSG00000133739|Q9C099-2|LRRCC1 6.284230709075928 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11830 63.626 453.0 480360.0 25 0 58882.0 -1 LGAHFCCFDS 10 182 578.7322649527589 1155.4499769723177 2 578.7324096560478 MULTI CID FTMS 0 0 0 11824 265870.5625 0.2022582650078232 -2 0.1661338806152343 6 Carbamidomethyl (C) _LGAHFC(Carbamidomethyl (C))CFDS_ ENST00000301633.8_1_17:76219650-76219956:+|nuORF 15.847184025352805 0.5816416552707754 4 AVAEE 5 -1 64.31 0.0 0.0 5.5658 0.0 0.0 0.0 653.219159819398 653.219159819398 38.31878761990978 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.0994850021680094 0.0 AVAEE 5.5658 - 1591 + 1 1.263 165556.2 1.0 7095 4733 11824 HBL1_DMSO_200M_050219_2,11830 HBL1_DMSO_200M_050219_2,11830,LGAHFCCFDS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11831 63.634 474.0 131130.0 25 0 12261.0 23546 LTLPRYLKAS 10 99 581.3534769680871 1160.692401002974 2 581.3549072146416 MULTI CID FTMS 0 0 0 11824 234409.921875 1.0 0 0.0 7 Unmodified _LTLPRYLKAS_ ENST00000608694.1_1_7:129250897-129251161:-|nuORF 10.073929032068715 0.6785112666868882 4 {I|L} 1 9 11.109 0.0 0.0 0.95712 0.0 0.0 1029.597168924652 0.0 1029.597168924652 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.95712 + + 68 + 1 1.263 52546.3 1.0 7096 4733 11824 HBL1_DMSO_200M_050219_2,11831 HBL1_DMSO_200M_050219_2,11831,LTLPRYLKAS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11832 63.645 595.0 331280.0 25 0 143690.0 + 40128 VGLKPAAL 8 165 384.751474064782 767.488395196364 2 384.7510864138603 MULTI CID FTMS 0 0 0 11824 228210.96875 1.0 0 0.0 8 Unmodified _VGLKPAAL_ REV__ENSG00000254470|ENST00000532090|AP5B1;REV__ENST00000316846.2_11:65545618-65547282:-|nuORF 0.7936320650641473 0.8195151834710337 4 {I|L} 1 -1 11.259 0.0 0.0 1.467 0.0 0.0 636.393376741089 0.0 636.393376741089 0.0 2.16827780469286 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.467 + + 48 + 1 1.263 155725.0 1.0 7097 4733 11824 HBL1_DMSO_200M_050219_2,11832 HBL1_DMSO_200M_050219_2,11832,VGLKPAAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11833 63.654 501.0 328430.0 25 0 32711.0 + 23771 LVAQRLEQL 9 201 535.320884968126 1068.627217003052 2 535.3207275271416 MULTI CID FTMS 0 0 0 11824 200594.8125 1.0 0 0.0 9 Unmodified _LVAQRLEQL_ ENSG00000126453|ENST00000246784|BCL2L12;nc|ENSG00000126453|Q9HB09-3|BCL2L12 34.93206674587334 0.1032771302489716 4 {I|L}VA[H{I|L}][R{M(Oxidation (M))|F}]T{I|L} 9 5 + 44.419 0.0 0.0 4.1566 4.1566 70.864 0.0 0.0 0.0 20.07937028389524 4.793738931157705 4.793738931157705 3.2809587911762605 0 0.75 1.6989700043360187 0.7302046884880938 0.3807196863200844 {I|L}VA[H{I|L}][R{M(Oxidation (M))|F}]T{I|L};{I|L}VA{I|L}{I|L}{I|L}C[DP]{I|L};{I|L}VA{I|L}{I|L}{I|L}CEPV;{I|L}VA{I|L}{I|L}{I|L}ECPV;{I|L}V[VP][RN]RC{I|L};{I|L}VA{I|L}{I|L}{I|L}[DP]C{I|L};{I|L}V[VP][RN]{I|L}C(Carbamidomethyl (C))V;{I|L}VA{I|L}{I|L}{I|L}[HQ]Y;{I|L}V[VP][RN]{I|L}CGV;{I|L}VA{I|L}{I|L}{I|L}E[VP]C 4.1566;3.8496;3.708;3.4765;3.1827;3.1346;3.1242;2.3833;2.3669;2.1335 -;-;-;-;-;-;-;-;-;- 2126 + 1 1.263 128805.2 1.0 7098 4733 11824 HBL1_DMSO_200M_050219_2,11833 HBL1_DMSO_200M_050219_2,11833,LVAQRLEQL True True LVAQRLEQL 63.653521 535.320727527142 755718.0625 11824.0 nc|ENSG00000126453|Q9HB09-3|BCL2L12;;ENSG00000126453|ENST00000246784|BCL2L12 1.573029721155763 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11834 63.666 673.0 235420.0 25 0 15456.0 + 2893 GLLQPHLERV 10 180 387.8965913723002 1160.667944717101 3 387.8961974978447 MULTI CID FTMS 0 0 0 11824 159159.828125 1.0 0 0.0 10 Unmodified _AVFKGRDQKL_ ENST00000488146.5_1_1:68942617-68947320:-|nuORF;nc|ENSG00000024526|Q5TB30-2|DEPDC1 8.97624648632007 0.6851160995914376 4 {[VA]|[{I|L}G]}A 3 8 23.468 0.0 0.0 2.0219 0.0 0.0 0.0 916.5015683345412 916.5015683345412 6.600971678920043 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}A 2.0219 - 616 1 1.263 128999.6 1.0 7099 4733 11824 HBL1_DMSO_200M_050219_2,11834 HBL1_DMSO_200M_050219_2,11834,AVFKGRDQKL False False GLLQPHLERV 63.666394 387.896197497845 1356301.75 11824.0 ENST00000488146.5_1_1:68942617-68947320:-|nuORF;;nc|ENSG00000024526|Q5TB30-2|DEPDC1 4.981392860412598 3.0 False 10.0 True non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 11835 63.68 771.0 77005.0 25 0 9271.7 -1 0 58 1103.4628219062367 0 1103.797045886517 PEAK CID FTMS 0 0 0 11824 95340.265625 1.0 0 0.0 11 4 Q 1 -1 4.6041 0.0 0.0 0.20881 0.0 0.0 1412.5575275021235 661.2882784479124 2073.845805950036 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.20881 - 14 + 1 1.263 49759.3 1.0 7100 4733 11824 HBL1_DMSO_200M_050219_2,11835 HBL1_DMSO_200M_050219_2,11835, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11836 63.691 625.0 177650.0 25 0 20532.0 + 26215 NQIESKAAYVL 11 133 618.3335814732857 1234.6526100133713 2 618.3566161990166 MULTI CID FTMS 0 0 0 11824 66245.046875 0.578285961829318 -1 0.0715980529785156 12 Unmodified _NQIESKAAYVL_ ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11 48.07275321834293 0.1283031204265279 4 {[QN]|[E{I|L}]|[KN]}{I|L}KC{I|L}AAY[{I|L}V] 11 3 + 59.047 0.0 0.0 4.7825 4.7825 76.988 0.0 0.0 0.0 11.036732317167008 7.367585652254185 7.367585652254185 6.22486274231747 0 1.055462187404089 1.3010299956639813 0.3054621874040891 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}{I|L}KC{I|L}AAY[{I|L}V];{[QN]|[E{I|L}]|[KN]}{I|L}E[KS]AAY[{I|L}V];{[QN]|[E{I|L}]|[KN]}{I|L}[RV]C(Carbamidomethyl (C))AY[{I|L}V];GGQ{I|L}KC{I|L}AAY[{I|L}V];{[QN]|[E{I|L}]|[KN]}{I|L}A[{I|L}A]C(Carbamidomethyl (C))AY[{I|L}V];GGQ{I|L}E[KS]AAY[{I|L}V];{[QN]|[E{I|L}]|[KN]}R[{I|L}V]C(Carbamidomethyl (C))AY[{I|L}V];{[QN]|[E{I|L}]|[KN]}{I|L}AE[KS]AY[{I|L}V];{[QN]|[E{I|L}]|[KN]}R{[MG]|[TS]}{I|L}AAY[{I|L}V];{[QN]|[E{I|L}]|[KN]}{I|L}[RV][CG]AY[{I|L}V] 4.7825;4.2783;3.9502;3.8885;3.7984;3.6318;3.443;3.3107;3.2441;3.208 -;+;-;-;-;-;-;-;-;- + 2727 1 1.263 83336.3 1.0 7101 4733 11824 HBL1_DMSO_200M_050219_2,11836 HBL1_DMSO_200M_050219_2,11836,NQIESKAAYVL False True NQIESKAAYVL 63.690695 618.356616199017 844457.9375 11824.0 nc|ENSG00000102226|P51784|USP11;;ENSG00000102226|ENST00000377107|USP11 5.027100086212158 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11838 63.695 4.5 10660000.0 25 0 1460500.0 -1 0 65 366.7366575692964 731.4587622053928 2 366.7364379763603 MULTI CID FTMS 0 0 0 11837 9120282.0 0.1655506862408326 3 -0.2964515686035156 1 4 [{I|L}V]PK[Y{I|L}] 6 -1 + 37.452 0.0 0.0 5.1202 5.1202 86.822 0.0 0.0 0.0 19.827796776480465 1.9627248839266545 1.9627248839266545 37.45235939505172 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK[Y{I|L}] 5.1202 - 30 + 1 1.256 45990.9 1.0 7102 4734 11837 HBL1_DMSO_200M_050219_2,11838 HBL1_DMSO_200M_050219_2,11838, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11839 63.696 2.6 14637000.0 25 0 2162400.0 + 43631 YALNHTLSV 9 62 509.2710193652375 1016.527485797275 2 509.2715637087822 MULTI CID FTMS 0 0 0 11837 17249632.0 0.9936185860983976 1 -0.089080810546875 2 Unmodified _YALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 39.94969957227396 0.0757326808254658 4 YA 2 7 43.271 0.0 0.0 4.2568 0.0 0.0 0.0 779.4065645807249 779.4065645807249 -3.165023049518787 0.0 -3.165023049518787 0.0 0 0.3807196863200844 2.0 0.0 0.0 + YA 4.2568 + + 230 + 1 1.256 33419.0 1.0 7103 4734 11837 HBL1_DMSO_200M_050219_2,11839 HBL1_DMSO_200M_050219_2,11839,YALNHTLSV True True YALNHTLSV 63.696085 509.271563708782 285659808.0 11837.0 ENSG00000110777|ENST00000393067|POU2AF1 4.106218179066976 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11840 63.697 5.0 11762000.0 25 0 2406000.0 + 39122 TYGERVVAF 9 67 521.2715702786957 1040.5285876241912 2 521.2723876833916 MULTI CID FTMS 0 0 0 11837 10339898.0 0.1192196134571446 -2 0.1752891540527343 3 Unmodified _TYGERVVAF_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;ENST00000462343.1_1_2:10266966-10267371:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 32.037481411007896 0.1235546156350648 4 [YT]GERVVA{M(Oxidation (M))|F} 9 0 + 62.814 0.0 0.0 6.0368 6.0368 91.23 0.0 0.0 0.0 10.079015433336169 31.84501246997776 10.079015433336169 62.81411260005832 0 1.774227503252014 2.0 0.0 0.0 + + [YT]GERVVA{M(Oxidation (M))|F} 6.0368 + + 96 1 1.256 53335.7 1.0 7104 4734 11837 HBL1_DMSO_200M_050219_2,11840 HBL1_DMSO_200M_050219_2,11840,TYGERVVAF True True TYGERVVAF 63.697264 521.272387683392 2066893632.0 11837.0 ENSG00000171848|ENST00000304567|RRM2;;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;;nc|ENSG00000171848|P31350-2|RRM2;;ENST00000462343.1_1_2:10266966-10267371:+|nuORF 7.769200960795085 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11841 63.698 12.0 3799700.0 25 0 602220.0 + 3575 DAAEIRLV 8 72 443.753444504845 885.49233607649 2 443.7533752322197 MULTI CID FTMS 0 0 0 11837 4621528.5 0.646957756431811 1 -0.089080810546875 4 Unmodified _DAAEIRLV_ ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232319904-232323320:-|nuORF;ENST00000494618.1_1_2:232322276-232325237:-|nuORF 39.957323273325 0.2350051964751539 4 {[DA]|[EG]}AE{I|L}R{I|L}V 8 0 + 65.398 0.0 0.0 7.3855 7.3855 95.964 0.0 0.0 0.0 53.804651147624085 7.71271006008984 7.71271006008984 65.39844496074615 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + + {[DA]|[EG]}AE{I|L}R{I|L}V 7.3855 + + 42 + 1 1.256 41434.0 1.0 7105 4734 11837 HBL1_DMSO_200M_050219_2,11841 HBL1_DMSO_200M_050219_2,11841,DAAEIRLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11842 63.7 60.0 846590.0 25 0 112060.0 + 18091 KTIGDLSTL 9 82 474.2739435931222 946.5333342530444 2 474.2742187380791 MULTI CID FTMS 0 0 0 11837 1070859.625 0.512146113731428 -1 0.1036911010742187 5 Unmodified _KTIGDLSTL_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 51.629811660486645 0.0367964933207742 4 [{I|L}T]K[DG]{I|L}ST{I|L} 9 2 + 57.425 0.0 0.0 6.0669 6.0669 88.991 0.0 0.0 0.0 13.748162098248995 40.435684192258 13.748162098248995 16.197887582883936 0 1.1989700043360187 1.3010299956639813 1.2302046884880935 0.0 [{I|L}T]K[DG]{I|L}ST{I|L};[{I|L}T][VG][SG]{I|L}ST{I|L};[KT]{I|L}[DG]{I|L}ST{I|L};{[MG]|[TS]}P[KT]{I|L}ST{I|L};[{I|L}T]KWWT{I|L};{NN|[MP]|[D{I|L}]|[EV]}G[KT]{I|L}ST{I|L};[{I|L}T][PS][KT]ST{I|L};{[MG]|[TS]}P{I|L}[KT]ST{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{I|L}[KT]ST{I|L};[KT]{I|L}WWT{I|L} 6.0669;4.3556;4.3325;3.8703;3.5316;3.2342;3.1284;2.5948;1.9587;1.7973 -;-;+;-;-;-;-;-;-;- + 227 1 1.256 43835.2 1.0 7106 4734 11837 HBL1_DMSO_200M_050219_2,11842 HBL1_DMSO_200M_050219_2,11842,KTIGDLSTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11843 63.702 113.0 864350.0 25 0 207190.0 + 21097 LPAHSILI 8 108 432.2711661080091 862.5277792828182 2 432.2711059451103 MULTI CID FTMS 0 0 0 11837 703877.8125 0.4033304966847311 2 -0.249481201171875 6 Unmodified _LPAHSILI_ REV__ENST00000573807.5_1_17:7216077-7216773:-|nuORF 45.7499826716795 0.1592378023510922 4 [YR]SV{I|L}{I|L}{I|L} 7 -1 + 33.605 0.0 0.0 3.8962 3.8962 72.301 0.0 0.0 0.0 4.392200779062492 17.66334779402399 4.392200779062492 4.776296993281406 0 0.6549471895720985 0.0 1.1861818737241734 0.0 [YR]SV{I|L}{I|L}{I|L};[YR]VS{I|L}{I|L}{I|L};[{I|L}P][HA]S{I|L}{I|L}{I|L};[YR]S{I|L}V{I|L}{I|L};[YR]{I|L}SV{I|L}{I|L};[YR]VTV{I|L}{I|L};[{I|L}P][HA]TV{I|L}{I|L};[HT][PA]V{I|L}{I|L}{I|L};[HT][PA]{I|L}V{I|L}{I|L} 3.8962;3.3424;3.1241;3.0347;2.9424;2.481;2.2627;2.0761;1.2147 -;-;+;-;-;-;-;-;- + 305 1 1.256 80371.2 1.0 7107 4734 11837 HBL1_DMSO_200M_050219_2,11843 HBL1_DMSO_200M_050219_2,11843,LPAHSILI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11844 63.705 122.0 612770.0 25 0 111040.0 + 40688 VLFPPPML 8 99 457.26420380462406 912.513854676048 2 457.2642089724541 MULTI CID FTMS 0 0 0 11837 639537.875 0.5107678174634313 10 -1.0479660034179688 7 Unmodified _VLFPPPML_ REV__ENSG00000146247|ENST00000275034|PHIP;REV__ENSG00000165288|ENST00000373275|BRWD3;REV__ENSG00000185658|ENST00000342449|BRWD1;REV__nc|ENSG00000165288|Q6RI45-2|BRWD3;REV__nc|ENSG00000165288|Q6RI45-3|BRWD3;REV__nc|ENSG00000165288|Q6RI45-4|BRWD3;REV__nc|ENSG00000165288|Q6RI45-5|BRWD3;REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1;REV__nc|ENSG00000185658|Q9NSI6|BRWD1 2.889219685676258 0.8067950007271085 4 V 1 -1 9.9148 0.0 0.0 1.0865 0.0 0.0 795.4343086328826 0.0 795.4343086328826 0.0 0.310739533744222 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0865 + + 9 + 1 1.256 63079.8 1.0 7108 4734 11837 HBL1_DMSO_200M_050219_2,11844 HBL1_DMSO_200M_050219_2,11844,VLFPPPML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11845 63.707 130.0 807480.0 25 0 102270.0 + 37009 TFPNGVKGL 9 121 466.7638337295896 931.5131145259792 2 466.7645751833916 MULTI CID FTMS 0 0 0 11837 586924.125 0.7805666639153787 -11 1.0109291076660156 8 Unmodified _TFPNGVKGL_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 48.345845343767074 0.0439967357579942 4 [{M(Oxidation (M))|F}T]PNGVKG{I|L} 9 0 + 48.324 0.0 0.0 5.1877 5.1877 79.885 0.0 0.0 0.0 6.478174818886373 7.403626894942434 6.478174818886373 7.403626894942434 0 0.3252574989159953 0.0 0.0 0.6989700043360187 + + [{M(Oxidation (M))|F}T]PNGVKG{I|L};[{M(Oxidation (M))|F}T]PNGVKAV;[{M(Oxidation (M))|F}T]PGGGVKG{I|L};[{M(Oxidation (M))|F}T]PGGGVKAV;[NP]GVKG{I|L}[{M(Oxidation (M))|F}T];[VP][NG]KG{I|L}[{M(Oxidation (M))|F}T];[NP]K[VG]G{I|L}[{M(Oxidation (M))|F}T];[{I|L}P]{[RE]|[WV]}G{I|L}[{M(Oxidation (M))|F}T];{[DA]|[EG]}[YR]VP[{I|L}V];[VP][W{I|L}]G{I|L}[{M(Oxidation (M))|F}T] 5.1877;4.3929;4.1992;3.4044;2.0239;1.4568;0.83597;0.57796;0.28783;0.19856 +;-;-;-;-;-;-;-;-;- + 422 + 1 1.256 84722.1 1.0 7109 4734 11837 HBL1_DMSO_200M_050219_2,11845 HBL1_DMSO_200M_050219_2,11845,TFPNGVKGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11846 63.714 368.0 497750.0 25 0 18758.0 + 43365 WPRPSSPPVV 10 164 561.3088007913716 1120.603048649543 2 561.3096801638603 MULTI CID FTMS 0 0 0 11837 532469.8125 1.0 0 0.0 9 Unmodified _WPRPSSPPVV_ ENSG00000163082|ENST00000321276|SGPP2;nc|ENSG00000163082|Q8IWX5-2|SGPP2 57.24910588100465 0.0438022649904578 4 [VP]P[KC]WPPVV 10 5 + 55.345 0.0 0.0 4.9389 4.9389 69.418 0.0 0.0 0.0 2.290236868861726 14.14651886415512 2.290236868861726 1.082942452024831 0 1.4559771852360797 1.0969100130080565 0.0 0.3494850021680094 [VP]P[KC]WPPVV;[VP]PW[SG]SPPVV;[VP]P[KC]{[DA]|[EG]}PPVV;[RP][RD]WPPVV;[VP]P[KC]PWPVV;[VP]PW[KC]PPVV;[RP][RD]PWPVV;[YV][YV]WPPVV;[VG][H{I|L}]{[QS]|[NT]}WPVV;[{I|L}P][WQ]WPPVV 4.9389;4.8422;4.8398;4.7345;4.4927;4.4722;4.2883;4.1854;4.1092;4.0563 -;-;-;-;-;-;-;-;-;- 4135 1 1.256 144891.9 1.0 7110 4734 11837 HBL1_DMSO_200M_050219_2,11846 HBL1_DMSO_200M_050219_2,11846,WPRPSSPPVV True True WPRPSSPPVV 63.714085 561.30968016386 35526207.0 11837.0 nc|ENSG00000163082|Q8IWX5-2|SGPP2;;ENSG00000163082|ENST00000321276|SGPP2 6.917370160420735 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11847 63.721 411.0 593410.0 25 0 49704.0 -1 GYYWFHRMAHE 11 123 756.8281976615024 1511.6418423898049 2 756.8290283083916 MULTI CID FTMS 0 0 0 11837 481497.90625 0.8374010432557999 -1 0.1036911010742187 10 Oxidation (M) _GYYWFHRM(Oxidation (M))AHE_ ENSG00000187546|ENST00000342526|AGMO 5.296884461304476 0.8501568894076437 4 [HA]{M(Oxidation (M))|F}ANQQA[DN]S{M(Oxidation (M))|F}Y 13 -1 + 82.683 0.0 0.0 5.4697 5.4697 81.508 0.0 0.0 0.0 33.45062126251933 5.563273204314669 5.563273204314669 7.816497282950905 0 0.3807196863200844 0.0 0.0 1.841129063296272 [HA]{M(Oxidation (M))|F}ANQQA[DN]S{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}ASDEAQQNA{M(Oxidation (M))|F}[CS];[HA]{M(Oxidation (M))|F}ANQ[AG]A[DN]S{M(Oxidation (M))|F}Y;[HA]{M(Oxidation (M))|F}AGGQQA[DN]S{M(Oxidation (M))|F}Y;[HA]{M(Oxidation (M))|F}AN[AG]QA[DN]S{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQNA{M(Oxidation (M))|F}[CS];{[QN]|[E{I|L}]|[KN]}ASDEA[AG]QNA{M(Oxidation (M))|F}[CS];{[QN]|[E{I|L}]|[KN]}ASDEAQQGGA{M(Oxidation (M))|F}[CS];{[QN]|[E{I|L}]|[KN]}ASDEAQ[AG]NA{M(Oxidation (M))|F}[CS];[VP]{[CT]|[{M(Oxidation (M))|F}G]}DEAQQNA{M(Oxidation (M))|F}[CS] 5.4697;4.9527;4.8696;4.8696;4.8696;4.5046;4.354;4.354;4.354;4.2084 -;-;-;-;-;-;-;-;-;- 11305 + 1 1.256 171637.4 1.0 7111 4734 11837 HBL1_DMSO_200M_050219_2,11847 HBL1_DMSO_200M_050219_2,11847,GYYWFHRMAHE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11848 63.723 73.0 640950.0 25 0 55005.0 + 44588 YPFKNLPTA 9 96 525.7822469585667 1049.5499409839333 2 525.7854492068291 MULTI CID FTMS 0 0 0 11837 499331.6875 0.4186455103265068 -8 0.6934356689453125 11 Unmodified _YPFKNLPTA_ ENSG00000138029|ENST00000317799|HADHB;ENST00000479347.1_1_2:26467821-26477398:+|nuORF 34.40172386719151 0.1061884637610825 4 YP{M(Oxidation (M))|F} 3 6 40.802 0.0 0.0 3.8876 0.0 0.0 0.0 639.3478487604124 639.3478487604124 21.10924374808178 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + YP{M(Oxidation (M))|F} 3.8876 + + 195 + 1 1.256 43745.1 1.0 7112 4734 11837 HBL1_DMSO_200M_050219_2,11848 HBL1_DMSO_200M_050219_2,11848,YPFKNLPTA True True YPFKNLPTA 63.723162 525.7869 2738913.25 11837.0 ENSG00000138029|ENST00000317799|HADHB;;ENST00000479347.1_1_2:26467821-26477398:+|nuORF 6.314939816792806 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11849 63.726 113.0 623140.0 25 0 71298.0 + 35916 SVPATVPSI 9 86 435.7504129981045 869.486273063009 2 435.7501708865166 MULTI CID FTMS 0 0 0 11837 478314.1875 0.760005537404842 -1 0.1036911010742187 12 Unmodified _SVPATVPSI_ ENST00000495210.1_1_1:222817751-222823660:+|nuORF;nc|ENSG00000154305|Q5JRA6-4|MIA3 34.10243960390752 0.1078313939113124 4 [PS]{I|L}ASP{I|L}[VS] 9 6 + 27.581 0.0 0.0 3.1721 3.1721 70.541 0.0 0.0 0.0 3.624912942351777 -6.394953452018797 -6.394953452018797 5.182662941162104 0 0.1989700043360188 0.8538719643217619 1.0451140161145327 0.0 [PS]{I|L}ASP{I|L}[VS];[PA]TVSP{I|L}[VS];[VS][PA]TP{I|L}[VS];{[TV]|[{I|L}S]}PASP{I|L}[VS];[PS]{I|L}GTP{I|L}[VS];[VG][{I|L}A]PD{I|L}[VS];[VG][PA]{I|L}D{I|L}[VS];{[TV]|[{I|L}S]}PGTP{I|L}[VS];[VG][TP]TP{I|L}[VS];[PA][VG]{I|L}D{I|L}[VS] 3.1721;2.5761;2.4955;2.4922;1.5365;1.4558;1.1763;0.85666;0.26406;0.016128 -;-;-;-;-;-;-;-;-;- 142 1 1.256 62182.0 1.0 7113 4734 11837 HBL1_DMSO_200M_050219_2,11849 HBL1_DMSO_200M_050219_2,11849,SVPATVPSI True True SVPATVPSI 63.725528 435.750170886517 7896488.0 11837.0 ENST00000495210.1_1_1:222817751-222823660:+|nuORF;;nc|ENSG00000154305|Q5JRA6-4|MIA3 2.877736290295919 2.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 11850 63.728 149.0 327630.0 25 0 50809.0 + 6539 EALGTALKV 9 90 451.2714577681312 900.5283626030623 2 451.2716247439384 MULTI CID FTMS 0 0 0 11837 414198.34375 0.3568667617065872 2 -0.249481201171875 13 Unmodified _EALGTALKV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 36.12702656103203 0.0967173616627612 4 {[CP]|[EA]}{I|L}GTA{I|L}KV 9 0 {[CP]|[EA]}{I|L} + + 29.078 10.859 3.4674 3.229 3.229 46.459 0.0 0.0 0.0 0.0 13.138633558621816 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + + {[CP]|[EA]}{I|L}GTA{I|L}KV 3.229 + + 204 + 1 1.256 43475.1 1.0 7114 4734 11837 HBL1_DMSO_200M_050219_2,11850 HBL1_DMSO_200M_050219_2,11850,EALGTALKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11851 63.73 63.0 594760.0 25 0 41426.0 -1 VAGMWDKYN 9 64 550.2451000395653 1098.4756471459305 2 550.2449218630791 MULTI CID FTMS 0 0 0 11837 380918.78125 1.0 0 0.0 14 Oxidation (M) _VAGM(Oxidation (M))WDKYN_ ENSG00000179431|ENST00000317811|FJX1 5.230669730166228 0.7320841359114558 4 V 1 -1 11.594 0.0 0.0 1.0554 0.0 0.0 981.3961926554992 0.0 981.3961926554992 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0554 + + 42 + 1 1.256 36050.5 1.0 7115 4734 11837 HBL1_DMSO_200M_050219_2,11851 HBL1_DMSO_200M_050219_2,11851,VAGMWDKYN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11852 63.738 448.0 1514100.0 25 0 442310.0 + + 22813 RVMEYINRL 9 152 597.3262260283174 1192.6378991234346 2 597.3269531130791 MULTI CID FTMS 0 0 0 11837 369568.90625 0.2567243641742823 -2 0.1752891540527343 15 2 Oxidation (M) _LRDLVKM(Oxidation (M))RM(Oxidation (M))_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 78.7280429016045 0.0178249292250809 4 RVMKYMN 7 -1 67.92 0.0 0.0 5.695 0.0 0.0 0.0 267.1465242975219 267.1465242975219 17.87418131181974 0.0 0.0 0.0 0 2.1030161628409108 1.0 0.0 0.6747425010840047 RVMKYMN 5.695 - 4870 + 1 1.256 505016.6 1.0 7116 4734 11837 HBL1_DMSO_200M_050219_2,11852 HBL1_DMSO_200M_050219_2,11852,LRDLVKMRM False False RVMEYINRL 63.73801 597.326953113079 23629800.75 11837.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 6.619164943695068 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11853 63.746 453.0 433950.0 25 0 26318.0 + 45821 YYPAQGVQQF 10 156 600.7879834055838 1199.5614138779674 2 600.7868530154228 MULTI CID FTMS 0 0 0 11837 351668.84375 0.2597511325648625 -2 0.1752891540527343 16 Unmodified _YYPAQGVQQF_ ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 68.08070601005525 0.0189984391031388 4 [AG]QPVQYYQ{M(Oxidation (M))|F} 10 6 + 51.409 0.0 0.0 4.2857 4.2857 65.277 0.0 0.0 0.0 4.84469123858446 8.328183540108895 4.84469123858446 0.2417236280627221 0 0.6237125054200234 1.5228787452803376 0.0 0.7302046884880937 [AG]QPVQYYQ{M(Oxidation (M))|F};[AG]GAPVQYYQ{M(Oxidation (M))|F};[AG]QPVYYQQ{M(Oxidation (M))|F};[AG]GAPVYYQQ{M(Oxidation (M))|F};[PA]QGVQYYQ{M(Oxidation (M))|F};{[QG]|[NA]}APVQYYQ{M(Oxidation (M))|F};[PA]QGVYYQQ{M(Oxidation (M))|F};{[QG]|[NA]}APVYYQQ{M(Oxidation (M))|F};[AG]APGVQYYQ{M(Oxidation (M))|F};[AG]QPVYQYQ{M(Oxidation (M))|F} 4.2857;4.2655;4.1941;4.174;3.8818;3.8153;3.7903;3.7238;3.6531;3.5966 -;-;-;-;-;-;-;-;-;- 4618 1 1.256 140776.7 1.0 7117 4734 11837 HBL1_DMSO_200M_050219_2,11853 HBL1_DMSO_200M_050219_2,11853,YYPAQGVQQF True True YYPAQGVQQF 63.746055 600.786853015423 29031506.0 11837.0 ENSG00000114867|ENST00000346169|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1 5.788827260335286 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11854 63.75 229.0 827140.0 25 0 111570.0 4896 DGIRIYKI 8 166 326.53094425093576 976.5710033530072 3 326.5306274294853 MULTI CID FTMS 0 0 0 11837 366243.25 1.0 0 0.0 17 Unmodified _DGIRIYKI_ ENSG00000129566|ENST00000262715|TEP1;ENST00000557314.5_1_14:20839728-20850189:-|nuORF;nc|ENSG00000129566|Q99973-2|TEP1 15.847184025352805 0.6768015514314958 4 [DG]{I|L}{I|L}RYK{I|L} 8 2 + 45.972 0.0 0.0 4.7075 4.7075 71.208 0.0 0.0 0.0 9.33561654977865 2.453611771497364 2.453611771497364 2.453611771497364 0 0.0796896906561032 0.8538719643217619 0.0 0.2302046884880938 [DG]{I|L}{I|L}RYK{I|L};[DG]{I|L}{I|L}RY{I|L}K;[DG]{I|L}R{I|L}YK{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{I|L}RYK{I|L};[DG]{I|L}R{I|L}Y{I|L}K;{NN|[MP]|[D{I|L}]|[EV]}G{I|L}RY{I|L}K;[DG]{I|L}{I|L}RP{[HG]|PP}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GR{I|L}YK{I|L};{NN|[MP]|[D{I|L}]|[EV]}GR{I|L}Y{I|L}K;[DG]{I|L}R{I|L}P{[HG]|PP}{I|L} 4.7075;4.4562;3.9106;3.7515;3.6594;3.5002;3.2744;2.9547;2.7034;2.4776 -;-;+;-;-;-;-;-;-;- + 161 + 1 1.256 152859.7 1.0 7118 4734 11837 HBL1_DMSO_200M_050219_2,11854 HBL1_DMSO_200M_050219_2,11854,DGIRIYKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11855 63.759 488.0 420630.0 25 0 61907.0 + 34938 SQITAIEAQHL 11 149 605.8250285195016 1209.6355041058032 2 605.8246948122978 MULTI CID FTMS 0 0 0 11837 308250.4375 0.4814561548498243 -1 0.1036911010742187 18 Unmodified _SQITAIEAQHL_ ENSG00000104812|ENST00000323798|GYS1;nc|ENSG00000104812|P13807-2|GYS1 154.7525637096362 0.0002850884048272 4 {[QS]|[NT]}{I|L}TA{I|L}EAQ{I|L}H 11 2 + 111.01 0.0 0.0 9.1772 9.1772 96.294 0.0 0.0 0.0 61.73913189955577 9.683671521309307 9.683671521309307 14.77419328091858 0 1.774227503252014 1.154901959985743 1.829689690656103 1.2134679910804405 {[QS]|[NT]}{I|L}TA{I|L}EAQ{I|L}H;{[QS]|[NT]}{I|L}TA{I|L}EA[H{I|L}]Q;{[QS]|[NT]}{I|L}TA{I|L}N[DV]{I|L}H;{[QS]|[NT]}{I|L}TA{I|L}EA[AG]{I|L}H;{[QS]|[NT]}{I|L}TA{I|L}N{I|L}[DV]H;{[QS]|[NT]}{I|L}TA{I|L}N[PG]N[VP];{[QS]|[NT]}{I|L}TA{I|L}GG[DV]{I|L}H;{[QS]|[NT]}{I|L}[PG]N{I|L}A[VP]SQ;{[QS]|[NT]}{I|L}T[KG]QAQ{I|L}H;{[QS]|[NT]}{I|L}T[PS]H{I|L}{I|L}SQ 9.1772;7.9558;7.9382;7.4194;7.3396;6.6457;6.5937;6.5333;6.3928;6.114 -;-;-;-;-;-;-;-;-;- 8221 + 1 1.256 150849.2 1.0 7119 4734 11837 HBL1_DMSO_200M_050219_2,11855 HBL1_DMSO_200M_050219_2,11855,SQITAIEAQHL True True SQITAIEAQHL 63.758991 605.8259 5361471.5 11837.0 ENSG00000104812|ENST00000323798|GYS1;;nc|ENSG00000104812|P13807-2|GYS1 7.087911764780681 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11856 63.771 592.0 129230.0 25 0 24213.0 -1 0 51 1091.7688818220322 3272.284816066297 3 1092.106616199017 MULTI CID FTMS 0 0 0 11837 298992.40625 0.1992384972870974 3 -0.2964515686035156 19 4 E 1 -1 5.4846 0.0 0.0 0.16761 0.0 0.0 2616.055907484312 524.1629122369749 3140.2188197212863 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16761 - 27 + 1 1.256 69261.2 1.0 7120 4734 11837 HBL1_DMSO_200M_050219_2,11856 HBL1_DMSO_200M_050219_2,11856, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11857 63.78 520.0 467520.0 25 0 37869.0 + 14624 IIINELSPEL 10 190 570.8279630547713 1139.6413731763423 2 570.8291503787041 MULTI CID FTMS 0 0 0 11837 289654.375 0.4476473321755955 -3 0.2698249816894531 20 Unmodified _IIINELSPEL_ REV__ENST00000407230.5_1_2:24866846-24896247:+|nuORF;REV__ENST00000483904.5_1_2:24866846-24881636:+|nuORF 36.12702656103203 0.1984647928738587 4 [PS]{I|L}[KG]S{I|L}AASP{I|L} 12 -1 + 49.192 0.0 0.0 4.3164 4.3164 65.895 0.0 0.0 0.0 0.4797833049380671 10.686362358410122 0.4797833049380671 0.4797833049380671 0 1.3807196863200843 1.2218487496163564 1.6271595765414315 0.2614393726401688 [PS]{I|L}[KG]S{I|L}AASP{I|L};[{I|L}P]S[KG]S{I|L}AASP{I|L};[EP]KKS{I|L}AASP{I|L};[PS]{I|L}[KG]S{I|L}[QT]P{I|L};[{I|L}P]S[KG]S{I|L}[QT]P{I|L};{I|L}QV[KT]{[NV]|[RG]}PE{I|L};[PS]{I|L}[KG][WR]SP{I|L};[{I|L}P]S[KG][WR]SP{I|L};{I|L}{I|L}QQS{I|L}AASP{I|L};[EP]KKS{I|L}[QT]P{I|L} 4.3164;4.2743;3.8638;3.5617;3.5196;3.4853;3.3686;3.3265;3.3013;3.1122 -;-;-;-;-;-;-;-;-;- 7531 1 1.256 189062.9 1.0 7121 4734 11837 HBL1_DMSO_200M_050219_2,11857 HBL1_DMSO_200M_050219_2,11857,IIINELSPEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11859 63.784 4.1 9177500.0 25 0 792660.0 + 22356 LPSPLKQTI 9 70 498.8081792005347 995.6018054678694 2 498.8085204958916 MULTI CID FTMS 0 0 0 11858 11681408.0 0.0440893805047335 8 -0.8458709716796875 1 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 39.94969957227396 0.0757326808254658 4 {I|L}PS[{I|L}P][KQ]T{I|L} 9 0 + 55.116 0.0 0.0 5.536 5.536 89.029 0.0 0.0 0.0 13.940162615404075 3.1213749954942926 3.1213749954942926 55.11615948493926 0 0.8807196863200843 1.6989700043360187 0.4247425010840047 0.0 + + {I|L}PS[{I|L}P][KQ]T{I|L} 5.536 + + 381 + 1 1.256 34939.4 1.0 7122 4735 11858 HBL1_DMSO_200M_050219_2,11859 HBL1_DMSO_200M_050219_2,11859,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11860 63.785 11.0 5496100.0 25 0 557010.0 19688 LGLRPLHQL 9 73 349.5540861262841 1045.6404289790523 3 349.5537597537041 MULTI CID FTMS 0 0 0 11858 4506248.5 0.3673837401792841 -3 0.2643699645996094 2 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 30.22481116460888 0.1466181017706357 4 {[VA]|[{I|L}G]}{I|L}{I|L}E 5 5 42.121 0.0 0.0 4.0283 0.0 0.0 0.0 517.3037203424436 517.3037203424436 19.426033128187115 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3252574989159953 0.0 {[VA]|[{I|L}G]}{I|L}{I|L}E 4.0283 - 92 + 1 1.256 59280.2 1.0 7123 4735 11858 HBL1_DMSO_200M_050219_2,11860 HBL1_DMSO_200M_050219_2,11860,LGLRPLHQL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11861 63.787 51.0 1881900.0 25 0 130080.0 + 19692 LGLRPLHQL 9 120 523.8263267544773 1045.6381005757546 2 523.8272582888603 MULTI CID FTMS 0 0 0 11858 1290582.25 0.3635526421240375 -3 0.2643699645996094 3 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 71.13359017698441 0.0206607516130725 4 {I|L}G{I|L}{I|L}[RP]HQ{I|L} 9 2 + 75.663 0.0 0.0 7.236 7.236 84.153 0.0 0.0 0.0 31.962724883926647 15.977767713256227 15.977767713256227 4.259687322722812 0 1.9489700043360187 1.6989700043360187 0.0 1.25 {I|L}G{I|L}{I|L}[RP]HQ{I|L};{I|L}G{I|L}P[R{I|L}]HQ{I|L};{I|L}G{I|L}{I|L}[RP]H[AG]{I|L};{I|L}G{I|L}{I|L}[RP]HAAV;{I|L}G{I|L}P[R{I|L}]H[AG]{I|L};{I|L}G{I|L}P[R{I|L}]HAAV;{[VA]|[{I|L}G]}{I|L}[WK]{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{I|L};[{I|L}V]A[WK]{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{I|L} 7.236;6.8287;5.8772;5.708;5.4699;5.3006;2.7783;0.74775 -;-;-;-;-;-;-;- 421 + 1 1.256 78185.4 1.0 7124 4735 11858 HBL1_DMSO_200M_050219_2,11861 HBL1_DMSO_200M_050219_2,11861,LGLRPLHQL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11862 63.788 35.0 1347900.0 25 0 82812.0 + + 28463 KVVPTFEAV 9 80 495.2911272751412 0 495.2862731814384 PEAK CID FTMS 0 0 0 11858 899005.9375 0.8454656619422235 1 -0.160400390625 4 Unmodified _PTFLVTGRV_ ENSG00000249115|ENST00000203166|HAUS5;ENST00000587439.5_1_19:36108795-36110661:+|nuORF;ENST00000585968.5_1_19:36103696-36110661:+|nuORF 15.847184025352805 0.2451986057151378 4 A 1 -1 13.979 0.0 0.0 1.4141 0.0 0.0 800.4512445631746 114.05661188297108 914.5078564461456 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 A 1.4141 - 160 + 1 1.256 42138.0 1.0 7125 4735 11858 HBL1_DMSO_200M_050219_2,11862 HBL1_DMSO_200M_050219_2,11862,PTFLVTGRV False False KVVPTFEAV 63.787697 495.286273181438 3901741.0 11858.0 ENSG00000249115|ENST00000203166|HAUS5;;ENST00000587439.5_1_19:36108795-36110661:+|nuORF;;ENST00000585968.5_1_19:36103696-36110661:+|nuORF 5.192090193430583 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11863 63.79 84.0 976280.0 25 0 81471.0 + 25290 NAAIIMKV 8 102 430.2569089195764 858.4992649059527 2 430.2574340701103 MULTI CID FTMS 0 0 0 11858 516885.28125 1.0 0 0.0 5 Unmodified _NAAIIMKV_ ENSG00000130755|ENST00000597595|GMFG 42.09456458481378 0.1992492688217789 4 {[QG]|[NA]}A{I|L}KVM{I|L} 8 4 + 43.927 0.0 0.0 5.1167 5.1167 76.002 0.0 0.0 0.0 4.21188592497311 0.876141831039746 0.876141831039746 4.21188592497311 0 0.8701523956413709 1.5228787452803376 0.0 0.4802046884880938 {[QG]|[NA]}A{I|L}KVM{I|L};YVVK{I|L}[HT];YVVK[HT]{I|L};GGAA{I|L}KVM{I|L};QQ{I|L}{I|L}MKV;[{I|L}A]ANKVM{I|L};[{I|L}A]AGGKVM{I|L};[{I|L}A]{I|L}[W{I|L}]M{I|L};{I|L}{I|L}[RD]VM{I|L} 5.1167;4.6261;2.9842;2.8775;2.8754;2.3442;1.2654;0.95507;0.45664 -;-;-;-;-;-;-;-;- 118 1 1.256 70528.7 1.0 7126 4735 11858 HBL1_DMSO_200M_050219_2,11863 HBL1_DMSO_200M_050219_2,11863,NAAIIMKV False True NAAIIMKV 63.78958 430.25743407011 3724062.5 11858.0 ENSG00000130755|ENST00000597595|GMFG 5.230865557988484 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11864 63.798 477.0 439300.0 25 0 19523.0 + 24873 MPMQDIKMI 9 186 561.7713110469138 1121.5280691606274 2 561.7721435427666 MULTI CID FTMS 0 0 0 11858 367303.375 1.0 0 0.0 6 Oxidation (M) _MPMQDIKM(Oxidation (M))I_ ENSG00000185686|ENST00000405655|PRAME 59.36838082759317 0.0264317782606298 4 MPMQD{I|L}K{M(Oxidation (M))|F}{I|L} 9 0 + 64.472 0.0 0.0 5.7485 5.7485 80.122 0.0 0.0 0.0 24.77121254719662 6.154239528859435 6.154239528859435 5.354123043345069 0 1.579689690656103 2.0 0.0 0.2614393726401688 + + MPMQD{I|L}K{M(Oxidation (M))|F}{I|L};MPN{[SA]|[TG]}{[QS]|[NT]}K{M(Oxidation (M))|F}{I|L};MPMQD{I|L}KYP;MPNE{M(Oxidation (M))|F}{I|L}KM{I|L};MPM[AG]D{I|L}K{M(Oxidation (M))|F}{I|L};MPN{[SA]|[TG]}{[QS]|[NT]}KYP;MPMQ[HS]PVPV;MPNE{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}P;MPN{[SA]|[TG]}[KC]KM{I|L};MPMWWKM{I|L} 5.7485;5.2712;5.1998;5.1499;4.9275;4.7224;4.6802;4.6012;4.5949;4.4271 +;-;-;-;-;-;-;-;-;- + 6577 + 1 1.256 161931.8 1.0 7127 4735 11858 HBL1_DMSO_200M_050219_2,11864 HBL1_DMSO_200M_050219_2,11864,MPMQDIKMI True False MPMQDIKMI 63.79802 561.772143542767 4390845.0 11858.0 ENSG00000185686|ENST00000405655|PRAME 5.404750347137451 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11865 63.807 503.0 484560.0 25 0 38877.0 36340 SYNYLDPNYF 10 153 648.2811785899519 1294.5478042467037 2 648.2820922732353 MULTI CID FTMS 0 0 0 11858 344184.5625 0.2620689566558897 -2 0.1927719116210937 7 Unmodified _SYNYLDPNYF_ ENSG00000036549|ENST00000370801|ZZZ3;nc|ENSG00000036549|Q8IYH5-2|ZZZ3;nc|ENSG00000036549|Q8IYH5-3|ZZZ3 18.1463463914782 0.5430639438673815 4 [YR]{I|L}P[C(Carbamidomethyl (C))C]SSY{M(Oxidation (M))|F} 10 7 + 57.523 0.0 0.0 4.4435 4.4435 74.937 0.0 0.0 0.0 15.30704082792294 39.64265737770158 15.30704082792294 5.563025007672877 0 1.305462187404089 0.958607314841775 0.4247425010840047 0.0 [YR]{I|L}P[C(Carbamidomethyl (C))C]SSY{M(Oxidation (M))|F};[YR]{I|L}C[C(Carbamidomethyl (C))R]DY{M(Oxidation (M))|F};[YR]{I|L}C[DV]{[C(Carbamidomethyl (C))G]|[NC]}Y{M(Oxidation (M))|F};[YR]{I|L}P[C(Carbamidomethyl (C))C]{[YC]|[HE]}A{M(Oxidation (M))|F};[QP][C(Carbamidomethyl (C))H][RN]SSY{M(Oxidation (M))|F};[AG]P[C(Carbamidomethyl (C))H][RN]SSY{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}C[C(Carbamidomethyl (C))R][{I|L}P]SY{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[Q{I|L}][C(Carbamidomethyl (C))R]DY{M(Oxidation (M))|F};[CS]Y[C(Carbamidomethyl (C))R][{I|L}P]SY{M(Oxidation (M))|F};[C(Carbamidomethyl (C))N]PPQ{[QN]|[E{I|L}]|[KN]}QY{M(Oxidation (M))|F} 4.4435;4.0138;3.1664;2.5133;2.4692;2.1033;1.862;1.3607;1.1376;1.0808 -;-;-;-;-;-;-;-;-;- 1073 1 1.256 177455.5 1.0 7128 4735 11858 HBL1_DMSO_200M_050219_2,11865 HBL1_DMSO_200M_050219_2,11865,SYNYLDPNYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11866 63.817 569.0 315220.0 25 0 12222.0 + + -1 RLVKDVFISA 10 186 574.2492828454451 1146.4840127576902 2 574.2510253787041 MULTI CID FTMS 0 0 0 11858 248631.5 0.2555095947189384 -6 0.5453071594238281 8 Carbamidomethyl (C) _FPFVFEC(Carbamidomethyl (C))CV_ ENSG00000008018|ENST00000262193|PSMB1 12.531546534597751 0.4974689918368763 4 PS{I|L}{I|L}SY 6 -1 44.324 0.0 0.0 3.8661 0.0 0.0 468.1335621735089 0.0 468.1335621735089 0.0 14.312398126969748 0.0 0.0 0 0.9559771852360796 0.0 0.8388903526330403 0.0 PS{I|L}{I|L}SY 3.8661 - 1313 + 1 1.256 136293.9 1.0 7129 4735 11858 HBL1_DMSO_200M_050219_2,11866 HBL1_DMSO_200M_050219_2,11866,FPFVFECCV False False RLVKDVFISA 63.816893 574.251025378704 2166048.25 11858.0 ENSG00000008018|ENST00000262193|PSMB1 3.2112796306610107 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11867 63.83 744.0 379990.0 25 0 34777.0 -1 GEAICMAI 8 216 412.188060606441 822.361568279682 2 412.1876708865166 MULTI CID FTMS 0 0 0 11858 228679.75 0.4995069607746101 -2 0.1927719116210937 9 Oxidation (M) _GEAICM(Oxidation (M))AI_ ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1 14.581692164780916 0.6954967302934248 4 V 1 -1 12.474 0.0 0.0 1.5169 0.0 0.0 705.2820374953055 0.0 705.2820374953055 0.0 1.9491039440756008 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.5169 - 117 + 1 1.256 221589.4 1.0 7130 4735 11858 HBL1_DMSO_200M_050219_2,11867 HBL1_DMSO_200M_050219_2,11867,GEAICMAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11868 63.843 778.0 396300.0 25 0 83031.0 + 32117 RVMEYINRL 9 183 398.553597187705 1192.638962163315 3 398.5535461306572 MULTI CID FTMS 0 0 0 11858 212902.8125 1.0 0 0.0 10 Unmodified _RVMEYINRL_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 69.10491478415734 0.0214449631113747 4 [RV]EMYK 6 6 57.521 0.0 0.0 4.823 0.0 0.0 0.0 383.18608387629655 383.18608387629655 42.21690939093696 0.0 0.0 0.0 0 1.1989700043360187 1.3979400086720375 0.8252574989159953 0.5418727718234408 [RV]EMYK 4.823 - 418 1 1.256 238852.0 1.0 7131 4735 11858 HBL1_DMSO_200M_050219_2,11868 HBL1_DMSO_200M_050219_2,11868,RVMEYINRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11869 63.854 647.0 216820.0 25 0 97618.0 -1 0 99 702.3815401343878 701.3742636677878 1 702.3800536990166 MULTI CID FTMS 0 0 0 11858 210302.703125 0.2194069106028748 67 -5.784706115722656 11 4 [{I|L}A]P{M(Oxidation (M))|F}A{I|L}A 7 -1 + 44.244 0.0 0.0 6.3082 6.3082 89.461 0.0 0.0 0.0 14.036757287974666 14.81508216873415 14.036757287974666 14.036757287974666 0 1.0 1.154901959985743 0.0 0.0 [{I|L}A]P{M(Oxidation (M))|F}A{I|L}A;{[QN]|[E{I|L}]|[KN]}WA{I|L}A;[{I|L}A][WE]{I|L}A;[{I|L}A][DG][KQ]A;{[HG]|PP}S{M(Oxidation (M))|F}A{I|L}A;{[QN]|[E{I|L}]|[KN]}N[KQ]A;[PS]P{M(Oxidation (M))|F}A{I|L}A;{[QN]|[E{I|L}]|[KN]}GG[KQ]A;{[DS]|[MA]|[CV]|TT}[PG][KQ]A 6.3082;4.3069;3.7376;3.3911;3.3531;3.0247;2.9698;1.6817;0.099791 -;-;-;-;-;-;-;-;- 160 1 1.256 106847.3 1.0 7132 4735 11858 HBL1_DMSO_200M_050219_2,11869 HBL1_DMSO_200M_050219_2,11869, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11870 63.869 779.0 335340.0 25 0 21570.0 + 34981 SQLQTPIGV 9 228 471.7661501631654 0 471.7658264040947 PEAK CID FTMS 0 0 0 11858 180853.4375 0.8483866125401448 1 -0.160400390625 12 Unmodified _SQLQTPIGV_ ENSG00000142252|ENST00000270257|GEMIN7 45.69961567697781 0.0434306681590773 4 RSP{I|L}T 5 7 28.558 0.0 0.0 3.0332 0.0 0.0 314.15869085191827 70.03067957095936 384.1893704228776 0.0 0.0 0.0 0.0 0 1.1307196863200843 0.0 0.2302046884880938 0.0 RSP{I|L}T 3.0332 - 2131 + 1 1.256 198546.5 1.0 7133 4735 11858 HBL1_DMSO_200M_050219_2,11870 HBL1_DMSO_200M_050219_2,11870,SQLQTPIGV True True SQLQTPIGV 63.869442 471.765826404095 1822373.75 11858.0 ENSG00000142252|ENST00000270257|GEMIN7 6.285055955251058 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11871 63.883 754.0 228400.0 25 0 9066.7 + 39125 TYGFSELQMTC 11 165 640.270523573111 1278.5264942130218 2 640.2717773318291 MULTI CID FTMS 0 0 0 11858 166751.609375 1.0 0 0.0 13 Unmodified _TYGFSELQMTC_ REV__ENSG00000101958|ENST00000218075|GLRA2;REV__nc|ENSG00000101958|P23416-2|GLRA2;REV__nc|ENSG00000101958|P23416-3|GLRA2 38.17557092003332 0.2405003631267018 4 [AG]TEYY{I|L} 7 -1 37.584 0.0 0.0 2.9396 0.0 0.0 0.0 478.1458539144468 478.1458539144468 7.519829008712932 0.0 0.0 0.0 0 0.6203715150305281 1.6989700043360187 1.149649864804614 0.0 [AG]TEYY{I|L} 2.9396 - 2456 1 1.256 133059.1 1.0 7134 4735 11858 HBL1_DMSO_200M_050219_2,11871 HBL1_DMSO_200M_050219_2,11871,TYGFSELQMTC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11872 63.897 800.0 260100.0 25 0 18666.0 + 41653 VPPSLPSL 8 210 405.2417577717272 808.4689626102544 2 405.2416259646416 MULTI CID FTMS 0 0 0 11858 153086.75 0.6121192151370671 4 -0.4469223022460937 14 Unmodified _VPPSLPSL_ REV__ENST00000523812.1_1_8:144357822-144358971:+|nuORF 40.44857923139169 0.2267865117615937 4 [{I|L}P]S[VP]PS{I|L} 8 -1 + 29.913 0.0 0.0 3.6999 3.6999 65.53 0.0 0.0 0.0 1.306258627847896 6.690884878976213 1.306258627847896 1.306258627847896 0 0.5242275032520141 1.6989700043360187 0.4247425010840047 0.0 [{I|L}P]S[VP]PS{I|L};[PS]VP[PS]{I|L}{I|L};[PS]VP{I|L}PS{I|L};[{I|L}P][VP]SPS{I|L};[VP]SP[PS]{I|L}{I|L};[VP]SP{I|L}PS{I|L};[{I|L}P]A[{I|L}A][DP]{I|L};[VP]PS[PS]{I|L}{I|L};[VP]PS{I|L}PS{I|L};{[HG]|PP}VS[PS]{I|L}{I|L} 3.6999;3.5383;3.4666;3.4571;2.941;2.8692;2.3383;2.1963;2.1245;1.7396 -;-;-;-;-;-;-;-;+;- + 242 1 1.256 159870.0 0.8799999952316284 7135 4735 11858 HBL1_DMSO_200M_050219_2,11872 HBL1_DMSO_200M_050219_2,11872,VPPSLPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11873 63.911 800.0 192880.0 25 0 31432.0 -1 0 118 988.788245596826 0 988.7873412966728 PEAK CID FTMS 0 0 0 11858 151729.9375 1.0 0 0.0 15 4 AEQVME 6 -1 24.157 0.0 0.0 1.2228 0.0 0.0 1005.0811776176768 280.16718469791255 1285.2483623155897 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AEQVME 1.2228 - 19635 + 1 1.256 108284.8 0.7699999809265137 7136 4735 11858 HBL1_DMSO_200M_050219_2,11873 HBL1_DMSO_200M_050219_2,11873, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11874 63.925 800.0 96087.0 25 0 4262.0 + 31543 RQLEALENDNF 11 129 674.8276003427205 1347.640647752241 2 674.8284789919853 MULTI CID FTMS 0 0 0 11858 144916.703125 1.0 0 0.0 16 Unmodified _RQLEALENDNF_ ENSG00000106400|ENST00000305105|ZNHIT1;ENST00000485387.1_1_7:100865814-100867236:+|nuORF;ENST00000492315.5_1_7:100864992-100867236:+|nuORF 10.898955630103616 0.8084357473702567 4 {[DA]|[EG]}V[Q{I|L}]A{I|L}ENDD 11 6 48.664 0.0 0.0 3.6111 0.0 0.0 0.0 161.07107555503435 161.07107555503435 31.945929530416524 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.3494850021680094 {[DA]|[EG]}V[Q{I|L}]A{I|L}ENDD 3.6111 - 873 1 1.256 64293.6 0.9700000286102296 7137 4735 11858 HBL1_DMSO_200M_050219_2,11874 HBL1_DMSO_200M_050219_2,11874,RQLEALENDNF False True RQLEALENDNF 63.925183 674.828478991985 1084537.5 11858.0 ENST00000492315.5_1_7:100864992-100867236:+|nuORF;;ENST00000485387.1_1_7:100865814-100867236:+|nuORF;;ENSG00000106400|ENST00000305105|ZNHIT1 4.3082179228464765 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11875 63.94 800.0 302420.0 25 0 26774.0 + + 13460 HLSDAIVEV 9 194 491.7639050229533 981.5132571127068 2 491.7640869021416 MULTI CID FTMS 0 0 0 11858 121903.75 0.5769166492893028 -1 0.089080810546875 17 Unmodified _HLSDALVEV_ ENSG00000105778|ENST00000318709|AVL9;nc|ENSG00000105778|Q8NBF6-2|AVL9 71.13359017698441 0.0206607516130725 4 [H{I|L}]SDA{I|L}VEV 9 -1 + 77.464 0.0 0.0 7.8923 7.8923 81.715 0.0 0.0 0.0 1.9698254843154783 16.478174818886373 1.9698254843154783 1.9698254843154783 0 0.9049471895720984 1.0969100130080565 1.1861818737241736 0.0 [H{I|L}]SDA{I|L}VEV;{NN|[MP]|[D{I|L}]|[EV]}[HS]A{I|L}VEV;{[TV]|[{I|L}S]}HDA{I|L}VEV;{NN|[MP]|[D{I|L}]|[EV]}[HA]S{I|L}VEV;{NN|[MP]|[D{I|L}]|[EV]}{[SA]|[TG]}H{I|L}VEV;[H{I|L}]SDAV{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[HS]AV{I|L}EV;[H{I|L}]{[DA]|[EG]}S{I|L}VEV;{[TV]|[{I|L}S]}HDAV{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[HA]SV{I|L}EV 7.8923;7.6916;7.2926;7.2458;7.0198;6.7649;6.5643;6.4562;6.1652;6.1185 +;-;-;-;-;-;-;-;-;- + 2310 1 1.256 183954.5 0.9800000190734864 7138 4735 11858 HBL1_DMSO_200M_050219_2,11875 HBL1_DMSO_200M_050219_2,11875,HLSDALVEV False False HLSDAIVEV 63.940173 491.764086902142 1435388.375 11858.0 ENSG00000105778|ENST00000318709|AVL9;;nc|ENSG00000105778|Q8NBF6-2|AVL9 6.377989292144775 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11877 63.944 4.7 8025200.0 25 0 1063200.0 + 24037 RIIDVVYNA 9 62 531.8007617129515 1061.586970492703 2 531.8011352419853 MULTI CID FTMS 0 0 0 11876 7529071.5 0.1020979429595641 3 -0.2865219116210937 1 Unmodified _LWALLVYNA_ ENSG00000142937|ENST00000396651|RPS8 13.50788311687929 0.4710407108020397 4 VVY{[QG]|[NA]} 5 5 27.218 0.0 0.0 2.5639 0.0 0.0 497.2966803933304 0.0 497.2966803933304 0.0 16.760912590556813 0.0 0.0 0 0.5 0.0 0.0 0.0 VVY{[QG]|[NA]} 2.5639 - 29 1 1.25 37729.4 1.0 7139 4736 11876 HBL1_DMSO_200M_050219_2,11877 HBL1_DMSO_200M_050219_2,11877,LWALLVYNA False False RIIDVVYNA 63.944389 531.801135241985 2498913536.0 11876.0 ENSG00000142937|ENST00000396651|RPS8 7.223836421966553 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11878 63.946 13.0 2878900.0 25 0 364210.0 36754 TEAFRVNWL 9 59 568.2990882343107 1134.583623535421 2 568.2995483279228 MULTI CID FTMS 0 0 0 11876 3772344.5 0.3231697365987401 3 -0.2865219116210937 2 Unmodified _TEAFRVNWL_ ENSG00000128536|ENST00000317716|CDHR3 4.3292370932331545 0.7635526921153418 4 T{I|L}V{M(Oxidation (M))|F} 4 7 24.68 0.0 0.0 2.1753 0.0 0.0 334.1740909199901 337.1512545221313 671.3253454421214 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T{I|L}V{M(Oxidation (M))|F} 2.1753 - 60 + 1 1.25 33355.9 1.0 7140 4736 11876 HBL1_DMSO_200M_050219_2,11878 HBL1_DMSO_200M_050219_2,11878,TEAFRVNWL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11879 63.947 2.5 21384000.0 25 0 3504400.0 + 12380 GTIDEIQKL 9 90 508.78524710371744 1015.5559412742348 2 508.7854492068291 MULTI CID FTMS 0 0 0 11876 20218418.0 0.999171245653858 -1 0.160400390625 3 Unmodified _GTIDEIQKL_ ENSG00000167986|ENST00000301764|DDB1 62.57269311338072 0.0246576765497938 4 {[SA]|[TG]}{I|L}DE{I|L}QK{I|L} 9 0 + 78.38 0.0 0.0 7.7179 7.7179 91.3 0.0 0.0 0.0 59.04825483465318 10.325930211995 10.325930211995 9.208187539523747 0 0.7302046884880937 1.3979400086720375 0.805462187404089 0.8494850021680094 + + {[SA]|[TG]}{I|L}DE{I|L}QK{I|L};{[SA]|[TG]}{I|L}DE{I|L}[AG]K{I|L};[KQ]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RP];[Q{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RP] 7.7179;6.8112;2.1329;1.7228 +;-;-;- + 245 + 1 1.25 47283.7 1.0 7141 4736 11876 HBL1_DMSO_200M_050219_2,11879 HBL1_DMSO_200M_050219_2,11879,GTIDEIQKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11880 63.948 7.8 7735700.0 25 0 1001500.0 + 38068 TPHDFIEHI 9 87 370.1857910015866 1107.53554360496 3 370.1856262087822 MULTI CID FTMS 0 0 0 11876 5001080.0 0.5613074021917014 -2 0.249481201171875 4 Unmodified _TPHDFIEHI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 37.97399986684836 0.0865783450051559 4 TPHD{M(Oxidation (M))|F}{I|L}E{I|L}H 9 2 + 67.972 0.0 0.0 6.1372 6.1372 90.665 0.0 0.0 0.0 46.11433640093276 11.962724883926654 11.962724883926654 29.913998282380817 0 0.4247425010840047 0.7695510786217261 0.4247425010840047 0.0 TPHD{M(Oxidation (M))|F}{I|L}E{I|L}H;T[WY]{M(Oxidation (M))|F}{I|L}E{I|L}H 6.1372;3.4362 -;- 131 + 1 1.25 60897.5 1.0 7142 4736 11876 HBL1_DMSO_200M_050219_2,11880 HBL1_DMSO_200M_050219_2,11880,TPHDFIEHI True True TPHDFIEHI 63.947925 370.185626208782 227948824.0 11876.0 ENST00000536795.1_1_12:4387934-4398180:+|nuORF;;ENSG00000118971|ENST00000261254|CCND2 6.203257242838542 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11881 63.949 14.0 3353400.0 25 0 306260.0 + 44525 YPDRNLPTI 9 77 544.7894064442501 1087.5642599553 2 544.7902099490166 MULTI CID FTMS 0 0 0 11876 3614585.75 0.7959374900565225 2 -0.1925582885742187 5 Unmodified _YPDRNLPTI_ ENSG00000115539|ENST00000264254|PDCL3 55.50274090549119 0.0285720310785888 4 YPPY[HT]PT 8 5 59.959 0.0 0.0 5.5131 0.0 0.0 0.0 128.07186304263908 128.07186304263908 18.994112934271143 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.805462187404089 0.0 YPPY[HT]PT 5.5131 - 159 + 1 1.25 43069.8 1.0 7143 4736 11876 HBL1_DMSO_200M_050219_2,11881 HBL1_DMSO_200M_050219_2,11881,YPDRNLPTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11882 63.95 15.0 3602900.0 25 0 246010.0 + 9822 FPDPNVKYV 9 86 539.7824019990643 1077.5502510649285 2 539.7822143435478 MULTI CID FTMS 0 0 0 11876 3088825.75 0.8921159033396087 -1 0.160400390625 6 Unmodified _FPDPNVKYV_ ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF 40.23920728925047 0.0741434193262949 4 {M(Oxidation (M))|F}PD[NP]VKYV 9 0 + 49.363 0.0 0.0 4.5811 4.5811 72.342 0.0 0.0 0.0 3.2080489725370995 3.2080489725370995 3.2080489725370995 3.2080489725370995 0 1.9731975075880328 0.0 0.0 0.0 + + {M(Oxidation (M))|F}PD[NP]VKYV;[DP]NVP{M(Oxidation (M))|F}KYV;[DP]NPV{M(Oxidation (M))|F}KYV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[NP]VKYV;[DP]{M(Oxidation (M))|F}[NP]VKYV;[DP]NP{M(Oxidation (M))|F}VKYV;[DP]NVPK{M(Oxidation (M))|F}YV;{M(Oxidation (M))|F}PYYVKYV;[DP]NPVK{M(Oxidation (M))|F}YV;[DP]GGVP{M(Oxidation (M))|F}KYV 4.5811;4.2833;4.1199;4.0832;4.0092;3.9145;3.7021;3.5857;3.5387;3.4288 +;-;-;+;-;-;-;-;-;- + 342 + 1 1.25 46086.1 1.0 7144 4736 11876 HBL1_DMSO_200M_050219_2,11882 HBL1_DMSO_200M_050219_2,11882,FPDPNVKYV True True FPDPNVKYV 63.950283 539.782214343548 268236656.0 11876.0 ENST00000529476.1_1_1:161011414-161013065:-|nuORF;;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;;ENSG00000158773|ENST00000368021|USF1 7.633383591969808 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11883 63.951 14.0 4502000.0 25 0 496520.0 + 23597 LTPKLFHEV 9 88 361.8783975835968 1082.6133633509903 3 361.8783447146416 MULTI CID FTMS 0 0 0 11876 2554736.25 1.0 0 0.0 7 Unmodified _LTPKLFHEV_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000487214.1_1_1:889839-894659:-|nuORF 24.99096001346401 0.2132109383330889 4 {I|L}TPK{I|L}{M(Oxidation (M))|F} 6 3 59.162 0.0 0.0 5.4647 0.0 0.0 0.0 380.1586716259952 380.1586716259952 36.76599703664159 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.0 + {I|L}TPK{I|L}{M(Oxidation (M))|F} 5.4647 + + 204 + 1 1.25 57000.7 1.0 7145 4736 11876 HBL1_DMSO_200M_050219_2,11883 HBL1_DMSO_200M_050219_2,11883,LTPKLFHEV False True LTPKLFHEV 63.95146 361.878344714642 24122138.0 11876.0 ENSG00000188976|ENST00000327044|NOC2L;;ENST00000487214.1_1_1:889839-894659:-|nuORF 5.013139247894287 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11884 63.953 22.0 2837200.0 25 0 441070.0 + 38070 TPHDFIEHI 9 82 554.7745663087271 1107.534579684254 2 554.7748901247978 MULTI CID FTMS 0 0 0 11876 2333203.75 0.5803551995956524 -2 0.249481201171875 8 Unmodified _TPHDFIEHI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 61.357469665136826 0.0253304979873734 4 [TP][WQ]EPTH{I|L} 9 5 + 63.567 0.0 0.0 5.7395 5.7395 76.191 0.0 0.0 0.0 2.996812376923046 8.862555824650684 2.996812376923046 2.996812376923046 0 1.174742501084005 1.6989700043360187 0.6747425010840047 0.0 [TP][WQ]EPTH{I|L};[HD]{M(Oxidation (M))|F}{I|L}EPTH{I|L};[TP][WQ]EH[TP]{I|L};[TP][WQ]TPEH{I|L};[HD]{M(Oxidation (M))|F}{I|L}EH[TP]{I|L};[HD]{M(Oxidation (M))|F}{I|L}TPEH{I|L};[H{I|L}]ES{M(Oxidation (M))|F}PEH{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PTH{I|L};{[YC]|[HE]}{I|L}S{M(Oxidation (M))|F}PEH{I|L};[H{I|L}]E{[CP]|[EA]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L} 5.7395;5.4689;4.5694;4.5377;4.2988;4.2671;3.6554;3.0354;2.7112;2.6459 -;-;-;-;-;-;-;-;-;- 358 1 1.25 56067.9 1.0 7146 4736 11876 HBL1_DMSO_200M_050219_2,11884 HBL1_DMSO_200M_050219_2,11884,TPHDFIEHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11885 63.954 22.0 2725000.0 25 0 386850.0 + 35777 SVIPQIQKV 9 83 506.3137288240521 1010.6129047149044 2 506.3141357302666 MULTI CID FTMS 0 0 0 11876 2208244.25 0.575515401348272 -3 0.3531723022460937 9 Unmodified _SVIPQIQKV_ ENSG00000151876|ENST00000281623|FBXO4;nc|ENSG00000151876|Q9UKT5-2|FBXO4 29.081581746732265 0.1611639662936252 4 [VS]{I|L}PQ{I|L}QKV 9 0 + 52.956 0.0 0.0 5.24 5.24 82.526 0.0 0.0 0.0 26.04490094786368 6.352615639163197 6.352615639163197 9.208187539523747 0 0.805462187404089 2.0 0.0 0.0 + + [VS]{I|L}PQ{I|L}QKV;[VS]{I|L}PQ{I|L}[AG]KV;[VS]{I|L}P[AG]{I|L}QKV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}QP{I|L}[PA];[VS]{I|L}P[AG]{I|L}[AG]KV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[AG]P{I|L}[PA] 5.24;4.3289;4.3289;4.2674;3.422;3.3562 +;-;-;-;-;- + 361 + 1 1.25 50234.4 1.0 7147 4736 11876 HBL1_DMSO_200M_050219_2,11885 HBL1_DMSO_200M_050219_2,11885,SVIPQIQKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11886 63.955 68.0 1204200.0 25 0 106190.0 + 15477 IPRVQVAQI 9 104 512.3192237719721 1022.6238946107444 2 512.3193847537041 MULTI CID FTMS 0 0 0 11876 1031486.9375 0.8670752682771368 -1 0.160400390625 10 Unmodified _IPRVQVAQI_ ENSG00000134882|ENST00000403766|UBAC2;nc|ENSG00000134882|Q8NBM4-2|UBAC2;nc|ENSG00000134882|Q8NBM4-3|UBAC2 32.30548876998284 0.1201446275138228 4 [AG]V[RP]{I|L}VAQ{I|L} 10 5 + 44.033 0.0 0.0 4.3059 4.3059 70.769 0.0 0.0 0.0 1.4703230897118118 30.599947491762943 1.4703230897118118 3.0102999566398125 0 0.7614393726401688 1.5228787452803376 0.0 0.0 [AG]V[RP]{I|L}VAQ{I|L};[AG]V[RP]V{I|L}AQ{I|L};[AG]V[RP]{I|L}G{I|L}Q{I|L};[AG]V[RP]VA{I|L}Q{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RP]{I|L}VAQ{I|L};[AG]V[RP]{I|L}VA[AG]{I|L};[KS][HK]{I|L}VAQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RP]V{I|L}AQ{I|L};[AG]V[RP]V{I|L}A[AG]{I|L};{[VA]|[{I|L}G]}G[RP]{I|L}VAQ{I|L} 4.3059;4.0115;3.8393;3.545;3.4907;3.4097;3.2737;3.1963;3.1154;3.1111 -;-;-;-;-;-;-;-;-;- 312 1 1.25 66197.6 1.0 7148 4736 11876 HBL1_DMSO_200M_050219_2,11886 HBL1_DMSO_200M_050219_2,11886,IPRVQVAQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11887 63.962 348.0 764170.0 25 0 190710.0 -1 0 72 1185.4822243504611 3553.424843651584 3 1185.816455066204 MULTI CID FTMS 0 0 0 11876 990497.3125 0.4613320434165631 -2 0.249481201171875 11 4 EC(Carbamidomethyl (C))[WY] 4 -1 10.177 0.0 0.0 0.28641 0.0 0.0 2897.195968048306 0.0 2897.195968048306 0.0 2.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 EC(Carbamidomethyl (C))[WY] 0.28641 - 89 + 1 1.25 210018.6 1.0 7149 4736 11876 HBL1_DMSO_200M_050219_2,11887 HBL1_DMSO_200M_050219_2,11887, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11888 63.963 62.0 1224700.0 25 0 101490.0 + 35049 SQSTVKVLI 9 107 487.7977084727952 973.5808640123904 2 487.7977172732353 MULTI CID FTMS 0 0 0 11876 972084.875 0.8094748376377514 -1 0.160400390625 12 Unmodified _SQSTVKVLI_ ENSG00000143621|ENST00000361891|ILF2 40.23920728925047 0.0741434193262949 4 {[QS]|[NT]}STV 5 4 36.0 0.0 0.0 3.6977 0.0 0.0 0.0 468.3200472467407 468.3200472467407 4.468339068740381 0.0 0.0 0.0 0 1.0941876774005248 0.8860566476931632 0.0 0.0 + {[QS]|[NT]}STV 3.6977 + + 190 + 1 1.25 65623.5 1.0 7150 4736 11876 HBL1_DMSO_200M_050219_2,11888 HBL1_DMSO_200M_050219_2,11888,SQSTVKVLI True True SQSTVKVLI 63.963292 487.797717273235 9039298.0 11876.0 ENSG00000143621|ENST00000361891|ILF2 1.7960123121738434 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11889 63.965 64.0 1533700.0 25 0 213380.0 + 13536 HPDSHQLFI 9 108 547.2750570028182 1092.5355610724364 2 547.2751953005791 MULTI CID FTMS 0 0 0 11876 920231.5625 0.1244989838636478 -3 0.3531723022460937 13 Unmodified _HPDSHQLFI_ ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136268294-136268516:-|nuORF 39.94969957227396 0.0757326808254658 4 DH{I|L}{M(Oxidation (M))|F}{I|L} 5 4 45.077 0.0 0.0 4.1259 0.0 0.0 449.2086353986344 0.0 449.2086353986344 0.0 30.12839460743858 0.0 0.0 0 0.7215141619232908 0.0 0.7059771852360797 0.0 DH{I|L}{M(Oxidation (M))|F}{I|L} 4.1259 - 434 1 1.25 77495.5 1.0 7151 4736 11876 HBL1_DMSO_200M_050219_2,11889 HBL1_DMSO_200M_050219_2,11889,HPDSHQLFI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11890 63.966 56.0 1544700.0 25 0 238820.0 + 44609 YPFKPPKI 8 91 330.5324354067559 988.5754768204677 3 330.5321227908134 MULTI CID FTMS 0 0 0 11876 800683.125 0.0733164402236368 -18 1.7339630126953125 14 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 45.876 0.0 0.0 4.6406 4.6406 85.088 0.0 0.0 0.0 24.449594420164686 1.4907942467239366 1.4907942467239366 45.876269455852 0 0.2614393726401688 0.9208187539523752 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L} 4.6406 + + 179 + 1 1.25 72408.5 1.0 7152 4736 11876 HBL1_DMSO_200M_050219_2,11890 HBL1_DMSO_200M_050219_2,11890,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11891 63.969 128.0 921270.0 25 0 127640.0 + 40427 VIIDDHPEVTV 11 90 618.8271676019123 1235.6397822706244 2 618.8275634646416 MULTI CID FTMS 0 0 0 11876 782885.75 0.6075924438772926 -2 0.249481201171875 15 Unmodified _VIIDDHPEVTV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 106.94017166704064 0.0090284146333777 4 V{I|L}{I|L}DDH[EP]VTV 11 0 + 99.607 0.0 0.0 8.0612 8.0612 95.964 0.0 0.0 0.0 59.38048987163715 15.070623213458036 15.070623213458036 23.16978857241304 0 2.048455006504028 2.0 1.666386562212267 0.0 + + V{I|L}{I|L}DDH[EP]VTV;V{I|L}{I|L}DM[{I|L}V]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TV;V{I|L}{I|L}[W{M(Oxidation (M))|F}]P{[{M(Oxidation (M))|F}D]|MM}TV;V{I|L}{I|L}[YE][WD]VTV;V{I|L}{I|L}[YE]C[TP]VTV;V{I|L}Y{[QN]|[E{I|L}]|[KN]}[WD]VTV;V{I|L}[{M(Oxidation (M))|F}V]D{M(Oxidation (M))|F}[TP]VTV;V{I|L}Y{[QN]|[E{I|L}]|[KN]}C[TP]VTV;[HD]D{I|L}PEV{I|L}VTV;[{I|L}V]R{M(Oxidation (M))|F}{M(Oxidation (M))|F}QQVTV 8.0612;6.1861;5.833;5.5884;5.4366;5.0227;5.0091;4.871;4.0998;3.7756 +;-;-;-;-;-;-;-;-;- + 1314 + 1 1.25 91166.0 1.0 7153 4736 11876 HBL1_DMSO_200M_050219_2,11891 HBL1_DMSO_200M_050219_2,11891,VIIDDHPEVTV True True VIIDDHPEVTV 63.968908 618.827563464642 23951004.0 11876.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 8.50524648030599 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11892 63.972 132.0 586200.0 25 0 93581.0 + -1 LGAEGSSCNDF 11 112 578.7322649527589 1155.4499769723177 2 578.7330810427666 MULTI CID FTMS 0 0 0 11876 711563.625 0.5413146264930228 1 -0.0469703674316406 16 Carbamidomethyl (C) _LGAEGSSC(Carbamidomethyl (C))NDF_ REV__ENST00000567811.1_1_16:68398525-68404929:-|nuORF 11.494710602746466 0.7960433852372589 4 AVAEE 5 -1 61.057 0.0 0.0 5.2843 0.0 0.0 0.0 653.2190645807249 653.2190645807249 45.69553846401256 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7302046884880937 0.0 AVAEE 5.2843 - 225 + 1 1.25 66052.9 1.0 7154 4736 11876 HBL1_DMSO_200M_050219_2,11892 HBL1_DMSO_200M_050219_2,11892,LGAEGSSCNDF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11893 63.975 151.0 801240.0 25 0 74505.0 + + 37784 KVLETTVEI 9 122 516.3031302166578 1030.5917075001155 2 516.3033935427666 MULTI CID FTMS 0 0 0 11876 617271.625 0.5158512139994065 -2 0.249481201171875 17 Unmodified _TLSEKLVEI_ ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENSG00000069329|ENST00000299138|VPS35 65.23502041540118 0.0231836506122253 4 {[QN]|[E{I|L}]|[KN]}ST{I|L}KVE{I|L} 9 -1 + 81.716 0.0 0.0 7.929 7.929 85.688 0.0 0.0 0.0 4.17491087293763 16.478174818886373 4.17491087293763 4.17491087293763 0 0.805462187404089 0.7695510786217261 2.4361818737241734 0.0 {[QN]|[E{I|L}]|[KN]}ST{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}TT{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}VKTTVE{I|L};{[QN]|[E{I|L}]|[KN]}SPVKV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}KTTVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}TPVKV{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}TE{I|L}KVE{I|L};{[TV]|[{I|L}S]}ET{I|L}KVE{I|L};[{I|L}T]SE{I|L}KVE{I|L};[{I|L}T]DT{I|L}KVE{I|L} 7.929;7.5239;6.8973;6.7975;6.4922;6.3924;6.3059;6.2615;6.2023;6.158 -;-;-;-;-;-;-;-;-;- 2659 1 1.25 97389.9 1.0 7155 4736 11876 HBL1_DMSO_200M_050219_2,11893 HBL1_DMSO_200M_050219_2,11893,TLSEKLVEI False False KVLETTVEI 63.974625 516.303393542767 11227638.0 11876.0 ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 4.034929672876994 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11894 63.977 84.0 595710.0 25 0 90002.0 + 11613 GLADNTVIAKV 11 74 550.8191999989616 0 550.8193237185478 PEAK CID FTMS 0 0 0 11876 576571.1875 1.0 0 0.0 18 Unmodified _GLADNTVIAKV_ ENSG00000113407|ENST00000265112|TARS1;nc|ENSG00000113407|P26639-2|TARS1 42.312485326615175 0.1091777760352646 4 ADNTV{I|L}A 7 4 53.264 0.0 0.0 4.8438 0.0 0.0 170.10616599790995 242.1514681451781 412.2576341430881 0.0 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.4247425010840047 + ADNTV{I|L}A 4.8438 + + 168 + 1 1.25 45000.9 1.0 7156 4736 11876 HBL1_DMSO_200M_050219_2,11894 HBL1_DMSO_200M_050219_2,11894,GLADNTVIAKV True True GLADNTVIAKV 63.976525 550.819323718548 4799690.5 11876.0 ENSG00000113407|ENST00000265112|TARS1;;nc|ENSG00000113407|P26639-2|TARS1 7.270314375559489 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11895 63.978 58.0 1005700.0 25 0 111950.0 -1 VGQSFMGITL 10 100 534.7723036613658 1067.5300543895314 2 534.7703735232353 MULTI CID FTMS 0 0 0 11876 500293.875 0.0877368456911307 9 -0.8786087036132812 19 Oxidation (M) _VGQSFM(Oxidation (M))GITL_ ENST00000317623.8_2_14:60600770-60600812:+|nuORF 27.628801355627647 0.3479284626772844 4 [Q{I|L}]D[HN]D{I|L}T{I|L} 9 -1 + 47.022 0.0 0.0 4.4048 4.4048 67.333 0.0 0.0 0.0 1.0011597355988755 1.0011597355988755 1.0011597355988755 1.0011597355988755 0 0.5 1.5228787452803376 0.4247425010840047 0.3494850021680094 [Q{I|L}]D[HN]D{I|L}T{I|L};[YN]P[QP][HV]T{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q[HN]D{I|L}T{I|L};{[VA]|[{I|L}G]}AD[HN]D{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG][HN]D{I|L}T{I|L};[Q{I|L}]D[HN]{[TV]|[{I|L}S]}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[CP]|[EA]}{I|L}T{I|L};{[CP]|[EA]}[VG][HN]D{I|L}T{I|L};[Q{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}[QP]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{NN|[MP]|[D{I|L}]|[EV]}Q[HN]{[TV]|[{I|L}S]}E{I|L} 4.4048;4.311;3.1694;3.1233;2.3069;2.2063;1.977;1.9507;1.1082;0.97099 -;-;-;-;-;-;-;-;-;- 147 1 1.25 48086.5 1.0 7157 4736 11876 HBL1_DMSO_200M_050219_2,11895 HBL1_DMSO_200M_050219_2,11895,VGQSFMGITL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11896 63.987 519.0 426520.0 25 0 39161.0 + + -1 LPPDASIV 8 130 811.3602352690538 1620.7059176049074 2 811.8630859255791 MULTI CID FTMS 0 0 0 11876 362559.875 1.0 0 0.0 20 Carbamidomethyl (C) _WMLEWYC(Carbamidomethyl (C))LHHF_ ENST00000541448.5_1_12:124457850-124458536:+|nuORF;ENST00000539644.5_1_12:124458320-124458536:+|nuORF 0.3506318815782774 0.8734936314171269 4 [YT][KT]S{I|L}[{M(Oxidation (M))|F}V]T 9 -1 25.956 0.0 0.0 1.6015 0.0 0.0 0.0 577.1525745045334 577.1525745045334 -0.784882791320058 0.0 -0.784882791320058 0.0 0 0.0 1.6989700043360187 0.9634679910804403 0.0 [YT][KT]S{I|L}[{M(Oxidation (M))|F}V]T 1.6015 - 1534 1 1.25 152371.0 1.0 7158 4736 11876 HBL1_DMSO_200M_050219_2,11896 HBL1_DMSO_200M_050219_2,11896,WMLEWYCLHHF False False LPPDASIV 63.987141 811.3621 327987.71875 11876.0 ENST00000541448.5_1_12:124457850-124458536:+|nuORF;;ENST00000539644.5_1_12:124458320-124458536:+|nuORF 4.181464195251465 1.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11898 63.991 0.67 85862000.0 25 0 18314000.0 + 39123 TYGERVVAF 9 66 521.2715702786957 1040.5285876241912 2 521.2726318240166 MULTI CID FTMS 0 0 0 11897 79508072.0 0.9167326032193764 1 -0.1455879211425781 1 Unmodified _TYGERVVAF_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;ENST00000462343.1_1_2:10266966-10267371:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 30.7034409873982 0.1405282614900322 4 TYGE 4 5 48.589 0.0 0.0 4.6696 0.0 0.0 0.0 587.3289888971311 587.3289888971311 5.145228064085998 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + TYGE 4.6696 + + 55 + 1 1.25 48508.5 1.0 7159 4737 11897 HBL1_DMSO_200M_050219_2,11898 HBL1_DMSO_200M_050219_2,11898,TYGERVVAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11899 63.993 40.0 1246500.0 25 0 144910.0 + 7641 KTIGDLSTL 9 85 474.2739435931222 946.5333342530444 2 474.2741271853447 MULTI CID FTMS 0 0 0 11897 1295414.375 0.6195409952336908 2 -0.2395515441894531 2 Unmodified _EKEKLSTL_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 46.020951573049366 0.1579632664462935 4 {[MG]|[TS]}PTK{I|L}ST{I|L} 9 4 + 48.355 0.0 0.0 5.1087 5.1087 68.765 0.0 0.0 0.0 0.3624270683831909 7.944539621753535 0.3624270683831909 0.3624270683831909 0 0.8182503180159344 0.0 1.3851518780601924 0.0 {[MG]|[TS]}PTK{I|L}ST{I|L};[{I|L}T]K[DG]{I|L}ST{I|L};[{I|L}T][DG]K{I|L}ST{I|L};[TP]STK{I|L}ST{I|L};{[DS]|[MA]|[CV]|TT}RR{I|L}ST{I|L};[KT]{I|L}[DG]{I|L}ST{I|L};[{I|L}T][VG][SG]{I|L}ST{I|L};[{I|L}T]KWWT{I|L};{[MG]|[TS]}P{I|L}[KT]ST{I|L};[{I|L}T][PS][KT]ST{I|L} 5.1087;5.0704;4.7523;4.6641;4.0185;3.6372;3.5935;2.9043;2.7255;2.3691 -;-;-;-;-;-;-;-;-;- 432 1 1.25 41321.7 1.0 7160 4737 11897 HBL1_DMSO_200M_050219_2,11899 HBL1_DMSO_200M_050219_2,11899,EKEKLSTL False False KTIGDLSTL 63.992537 474.274127185345 35184152.0 11897.0 ENSG00000080345|ENST00000444746|RIF1;;nc|ENSG00000080345|Q5UIP0-2|RIF1 3.5668177604675293 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11900 63.994 19.0 2628000.0 25 0 237320.0 + 39546 VAWVGQQV 8 75 443.742626364196 885.470699795192 2 443.7424194216728 MULTI CID FTMS 0 0 0 11897 2465112.0 0.2666349675709814 -1 0.0469703674316406 3 Unmodified _VAWVGQQV_ ENSG00000170540|ENST00000304414|ARL6IP1;nc|ENSG00000170540|Q15041-2|ARL6IP1 36.46614268402704 0.2934124525509074 4 {[RE]|[WV]}AV{[QG]|[NA]}QV 8 2 + 30.851 0.0 0.0 3.4842 3.4842 64.205 0.0 0.0 0.0 0.9691001300805624 6.694699959806982 0.9691001300805624 0.9691001300805624 0 0.6237125054200234 1.3979400086720375 0.0 0.0 {[RE]|[WV]}AV{[QG]|[NA]}QV;{[VA]|[{I|L}G]}WV{[QG]|[NA]}QV;{[RE]|[WV]}AN{[VA]|[{I|L}G]}QV;{[VA]|[{I|L}G]}WN{[VA]|[{I|L}G]}QV;{[VA]|[{I|L}G]}GGW{[VA]|[{I|L}G]}QV;[AG]VGW{[VA]|[{I|L}G]}QV;{[RE]|[WV]}AGG{[VA]|[{I|L}G]}QV;{[VA]|[{I|L}G]}NW{[VA]|[{I|L}G]}QV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VV{[QG]|[NA]}QV;{[VA]|[{I|L}G]}WGG{[VA]|[{I|L}G]}QV 3.4842;3.3747;2.9453;2.8359;2.2076;2.0088;1.8993;1.816;1.796;1.7899 -;+;-;-;-;-;-;-;-;- + 153 1 1.25 44231.3 1.0 7161 4737 11897 HBL1_DMSO_200M_050219_2,11900 HBL1_DMSO_200M_050219_2,11900,VAWVGQQV False True VAWVGQQV 63.993716 443.742419421673 77510112.0 11897.0 ENSG00000170540|ENST00000304414|ARL6IP1;;nc|ENSG00000170540|Q15041-2|ARL6IP1 5.545905907948812 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11901 63.995 68.0 1084700.0 25 0 148830.0 -1 0 66 366.7366575692964 731.4587622053928 2 366.7364684939384 MULTI CID FTMS 0 0 0 11897 958365.4375 0.0173961787417999 6 -0.6385002136230469 4 4 [{I|L}V]PK{I|L}Y 6 -1 + 48.421 0.0 0.0 6.6198 6.6198 92.598 0.0 0.0 0.0 28.718801225040465 10.80198135264581 10.80198135264581 31.84955642535897 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK{I|L}Y;[KP]{I|L}{I|L}VY;[K{I|L}]P{I|L}VY 6.6198;2.2656;1.5218 -;-;- 57 + 1 1.25 64247.5 1.0 7162 4737 11897 HBL1_DMSO_200M_050219_2,11901 HBL1_DMSO_200M_050219_2,11901, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11902 63.998 133.0 591370.0 25 0 98685.0 + 12468 GVAFLFLF 8 115 457.26420380462406 912.513854676048 2 457.2649413943291 MULTI CID FTMS 0 0 0 11897 601730.3125 0.4805727548461667 13 -1.2922477722167969 5 Unmodified _GVAFLFLF_ REV__ENSG00000152254|ENST00000375363|G6PC2 6.354104778181461 0.7857632046190106 4 V 1 -1 11.783 0.0 0.0 1.2912 0.0 0.0 795.4343620386443 0.0 795.4343620386443 0.0 1.2981865525287797 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2912 + + 35 + 1 1.25 65613.3 1.0 7163 4737 11897 HBL1_DMSO_200M_050219_2,11902 HBL1_DMSO_200M_050219_2,11902,GVAFLFLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11903 64.0 78.0 622480.0 25 0 47538.0 + 38957 TVPATHPTAVG 11 87 525.7822469585667 1049.5499409839333 2 525.7795898318291 MULTI CID FTMS 0 0 0 11897 631021.5 0.5290557849775913 -5 0.47174072265625 6 Unmodified _TVPATHPTAVG_ REV__ENST00000383168.8_2_18:24434304-24434469:-|nuORF 16.149105407346934 0.6992268271266642 4 {[SA]|[TG]}[{I|L}V][{M(Oxidation (M))|F}E]GATR 10 -1 + 43.35 0.0 0.0 4.1304 4.1304 66.888 0.0 0.0 0.0 1.2973761949006857 9.164539485499247 1.2973761949006857 1.2973761949006857 0 0.9247425010840048 1.3979400086720375 0.0 0.0 {[SA]|[TG]}[{I|L}V][{M(Oxidation (M))|F}E]GATR;{[QN]|[E{I|L}]|[KN]}[YQ]Q{I|L}TR;{[QN]|[E{I|L}]|[KN]}K[{M(Oxidation (M))|F}E]GATR;{[SA]|[TG]}[{I|L}V][{M(Oxidation (M))|F}E]QTR;{NN|[MP]|[D{I|L}]|[EV]}[KS]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}TR;{[QN]|[E{I|L}]|[KN]}K[{M(Oxidation (M))|F}E]QTR;{[QN]|[E{I|L}]|[KN]}K[W{M(Oxidation (M))|F}]ATR;{[QN]|[E{I|L}]|[KN]}[YQ]{I|L}GATR;{[QN]|[E{I|L}]|[KN]}[YQ]{I|L}QTR;{NN|[MP]|[D{I|L}]|[EV]}[KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATR 4.1304;4.0067;4.0016;3.9626;3.8988;3.839;3.839;3.7148;3.5521;3.4442 -;-;-;-;-;-;-;-;-;- 627 1 1.25 44714.3 1.0 7164 4737 11897 HBL1_DMSO_200M_050219_2,11903 HBL1_DMSO_200M_050219_2,11903,TVPATHPTAVG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11904 64.002 122.0 592290.0 25 0 42158.0 + 43449 WTAELGIRHV 10 97 394.5523751510492 0 394.5525085330009 PEAK CID FTMS 0 0 0 11897 538986.5625 1.0 0 0.0 7 Unmodified _WTAELGIRHV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 47.74868867922204 0.0612993202955131 4 {I|L}G{I|L}R 4 6 24.17 0.0 0.0 3.0708 0.0 0.0 93.66055296695852 251.11555059597447 344.776103562933 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6747425010840047 + {I|L}G{I|L}R 3.0708 + + 46 + 1 1.25 61812.9 1.0 7165 4737 11897 HBL1_DMSO_200M_050219_2,11904 HBL1_DMSO_200M_050219_2,11904,WTAELGIRHV True True WTAELGIRHV 64.002354 394.552508533001 2933975.5 11897.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 6.287536144256592 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11905 64.005 122.0 520910.0 25 0 42679.0 + 42259 VSPGLTPSL 9 96 435.7504129981045 869.486273063009 2 435.7506896853447 MULTI CID FTMS 0 0 0 11897 493512.6875 0.7841548193247881 2 -0.2395515441894531 8 Unmodified _VSPGLTPSL_ ENST00000534407.5_1_11:124757602-124761787:-|nuORF 23.1484247019978 0.2366544122328345 4 [PS]{I|L}A[PS]{I|L}[VS] 9 5 + 22.047 0.0 0.0 2.5356 2.5356 69.46 0.0 0.0 0.0 5.241049764686142 5.403624586739685 5.241049764686142 5.241049764686142 0 0.0 0.8239087409443188 0.9247425010840048 0.0 [PS]{I|L}A[PS]{I|L}[VS];[PA]TV[PS]{I|L}[VS];[VG][{I|L}A][DP]{I|L}[VS];[VG][PA]{NN|[MP]|[D{I|L}]|[EV]}{I|L}[VS] 2.5356;1.9328;0.58303;0.30351 -;-;-;- 87 1 1.25 54634.6 1.0 7166 4737 11897 HBL1_DMSO_200M_050219_2,11905 HBL1_DMSO_200M_050219_2,11905,VSPGLTPSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11906 64.007 100.0 824680.0 25 0 137370.0 + 37010 TFPNGVKGL 9 91 466.7638337295896 931.5131145259792 2 466.7643310427666 MULTI CID FTMS 0 0 0 11897 457065.9375 0.6078646605704442 -8 0.7526779174804688 9 Unmodified _TFPNGVKGL_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 26.88365393820708 0.1891292719743517 4 KRNPET 6 8 33.901 0.0 0.0 3.6393 0.0 0.0 188.1165333478532 0.0 188.1165333478532 0.0 7.760306567618109 0.0 0.0 0 0.6237125054200234 0.0 0.0 0.4247425010840047 KRNPET 3.6393 - 178 1 1.25 68726.8 1.0 7167 4737 11897 HBL1_DMSO_200M_050219_2,11906 HBL1_DMSO_200M_050219_2,11906,TFPNGVKGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11907 64.016 511.0 424100.0 25 0 47292.0 + 32081 RVLPPSALQSV 11 161 583.8482282329863 1165.6819035327726 2 583.8489868044853 MULTI CID FTMS 0 0 0 11897 302050.25 0.5345443231313777 15 -1.5363044738769531 10 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 70.92866715596459 0.0297132693151486 4 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 59.377 0.0 0.0 5.0938 5.0938 80.891 0.0 0.0 0.0 4.08449992301739 33.858964471424706 4.08449992301739 9.128498242811006 0 1.1421590589602533 0.0 1.3494850021680094 0.1923877696554315 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[{I|L}P][RV][PS]A{I|L}QSV;[{I|L}P]{[RE]|[WV]}[KP]{I|L}QSV;{[TV]|[{I|L}S]}[HK][{I|L}A]A{I|L}QSV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[RV]{I|L}P[PS]RRW;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV;[{I|L}P][RV]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV 5.0938;4.3107;3.8964;3.0105;2.8971;1.967;1.666;1.1808;0.76965 +;-;-;-;-;-;-;-;- + 1605 1 1.25 161950.7 1.0 7168 4737 11897 HBL1_DMSO_200M_050219_2,11907 HBL1_DMSO_200M_050219_2,11907,RVLPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11908 64.021 248.0 405510.0 25 0 34018.0 + 8969 FAPMSPRI 8 119 459.74758739150224 917.4806218498044 2 459.7475463747978 MULTI CID FTMS 0 0 0 11897 299553.53125 1.0 0 0.0 11 Unmodified _FAPMSPRI_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 42.09456458481378 0.1992492688217789 4 {[MS]|[{M(Oxidation (M))|F}A]}PMS[RP]{I|L} 8 0 + 33.949 0.0 0.0 3.7003 3.7003 77.827 0.0 0.0 0.0 19.679250024847267 7.368800006334347 7.368800006334347 9.692737604564035 0 0.3494850021680094 0.0 0.3252574989159953 0.6109243748081782 + + {[MS]|[{M(Oxidation (M))|F}A]}PMS[RP]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}PM[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]};{[MS]|[{M(Oxidation (M))|F}A]}[WE][RP]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}WWPV;[TP][{M(Oxidation (M))|F}T][{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]};{[MS]|[{M(Oxidation (M))|F}A]}P{[SA]|[TG]}[RN]GV;[TP][{M(Oxidation (M))|F}T][{I|L}P]SGV 3.7003;2.6438;0.64656;0.50705;0.41905;0.37565;0.10831 +;-;-;-;-;-;- + 205 + 1 1.25 82487.8 1.0 7169 4737 11897 HBL1_DMSO_200M_050219_2,11908 HBL1_DMSO_200M_050219_2,11908,FAPMSPRI False True FAPMSPRI 64.020635 459.747546374798 2303009.75 11897.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 3.7974906762441 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11909 64.031 586.0 308490.0 25 0 34551.0 + 1538 ALKPDLVNV 9 166 484.79366999772856 967.5727870622572 2 484.7919494509697 MULTI CID FTMS 0 0 0 11897 275847.25 0.7004088536205331 -1 0.0469703674316406 12 Unmodified _ALKPDLVNV_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 66.45667989310934 0.0225072657982126 4 [{I|L}P]DKA{I|L}VNV 9 4 + 62.224 0.0 0.0 6.4309 6.4309 82.916 0.0 0.0 0.0 9.99491555391522 13.212112250009652 9.99491555391522 5.509074688805811 0 0.7302046884880938 1.3010299956639813 0.2887254899964357 0.3494850021680094 [{I|L}P]DKA{I|L}VNV;[{I|L}P]SVGA{I|L}VNV;[{I|L}P]DAK{I|L}VNV;[{I|L}P]SVQ{I|L}VNV;[{I|L}P]SRA{I|L}VNV;[{I|L}P]DKA{I|L}VGGV;[{I|L}A]PDK{I|L}VNV;[{I|L}P]DVK[{I|L}A]NV;[{I|L}A]KVEPVNV;[{I|L}A]K{I|L}DPVNV 6.4309;5.8616;5.7085;5.4976;5.4976;5.4792;5.3979;5.3422;5.2978;5.2286 -;-;-;-;-;-;-;-;-;- 7487 1 1.25 138660.0 1.0 7170 4737 11897 HBL1_DMSO_200M_050219_2,11909 HBL1_DMSO_200M_050219_2,11909,ALKPDLVNV True True ALKPDLVNV 64.030879 484.79194945097 9719587.0 11897.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1;;ENST00000493342.1_1_X:24745055-24752029:+|nuORF 5.875256538391113 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11910 64.043 688.0 460820.0 25 0 37643.0 + 5091 DHASLTLV 8 211 428.2317129349523 854.4488729367047 2 428.2313720583916 MULTI CID FTMS 0 0 0 11897 247558.1875 0.7403612805426545 -1 0.0469703674316406 13 Unmodified _DHASLTLV_ REV__ENSG00000166341|ENST00000299441|DCHS1 49.66892048692302 0.1408045912742846 4 {[DA]|[EG]}HS{I|L}{I|L}TV 8 -1 + 45.154 0.0 0.0 5.2845 5.2845 76.22 0.0 0.0 0.0 3.868510365064239 9.731975075880328 3.868510365064239 3.868510365064239 0 0.6989700043360187 0.7695510786217261 1.555462187404089 0.0 {[DA]|[EG]}HS{I|L}{I|L}TV;[HA]DS{I|L}{I|L}TV;{[DA]|[EG]}HS{I|L}T[{I|L}V];[HS]{[DA]|[EG]}{I|L}{I|L}TV;[HA]DS{I|L}T[{I|L}V];{[SA]|[TG]}[HD]{I|L}{I|L}TV;{[TV]|[{I|L}S]}{I|L}D[HA]TV;{[DA]|[EG]}H{I|L}{I|L}STV;[HS]{[DA]|[EG]}{I|L}T[{I|L}V];[{I|L}T]VD[HA]TV 5.2845;4.8318;3.4259;3.3551;2.9732;2.767;2.415;1.7749;1.4965;1.3746 -;-;-;-;-;-;-;-;-;- 413 1 1.25 248351.5 1.0 7171 4737 11897 HBL1_DMSO_200M_050219_2,11910 HBL1_DMSO_200M_050219_2,11910,DHASLTLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11911 64.055 720.0 252140.0 25 0 65991.0 -1 0 56 1060.5099834242842 2119.0054139153685 2 1060.509082019329 MULTI CID FTMS 0 0 0 11897 227223.265625 1.0 0 0.0 14 4 {M(Oxidation (M))|F} 1 -1 7.7866 0.0 0.0 0.36746 0.0 0.0 1078.4749650042545 890.4361055963499 1968.911070600604 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.36746 - 16 + 1 1.25 121973.9 1.0 7172 4737 11897 HBL1_DMSO_200M_050219_2,11911 HBL1_DMSO_200M_050219_2,11911, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11912 64.069 800.0 116240.0 25 0 15085.0 -1 0 62 1130.130872426843 0 1130.471972644329 PEAK CID FTMS 0 0 0 11897 58367.3984375 0.6345113834124155 1 -0.1455879211425781 15 4 {I|L} 1 -1 3.9794 0.0 0.0 0.17622 0.0 0.0 1217.7160040177023 924.4466036432248 2142.162607660928 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.17622 - 19 + 1 1.25 69525.3 0.9900000095367432 7173 4737 11897 HBL1_DMSO_200M_050219_2,11912 HBL1_DMSO_200M_050219_2,11912, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11913 64.082 637.0 144650.0 25 0 8926.2 -1 ETYCMFQDKKY 11 108 756.8281976615024 1511.6418423898049 2 757.3291503787041 MULTI CID FTMS 0 0 0 11897 184519.625 0.3494602585091684 2 -0.2395515441894531 16 Carbamidomethyl (C) _ETYC(Carbamidomethyl (C))MFQDKKY_ ENSG00000101938|ENST00000372042|CHRDL1;nc|ENSG00000101938|Q9BU40-3|CHRDL1;nc|ENSG00000101938|Q9BU40-5|CHRDL1;nc|ENSG00000101938|Q9BU40|CHRDL1 1.4819007175156935 0.86815623132643 4 [YQ][HS]EAQQNA 10 -1 49.569 0.0 0.0 3.2792 0.0 0.0 0.0 352.13071403807766 352.13071403807766 31.610466707713023 0.0 0.0 0.0 0 0.0 2.0 0.5 0.7614393726401688 [YQ][HS]EAQQNA 3.2792 - 1544 1 1.25 68187.8 1.0 7174 4737 11897 HBL1_DMSO_200M_050219_2,11913 HBL1_DMSO_200M_050219_2,11913,ETYCMFQDKKY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11914 64.093 621.0 204800.0 25 0 32107.0 + 43448 WTAELGIRHV 10 139 591.3234075027225 1180.6322620722449 2 591.8270751833916 MULTI CID FTMS 0 0 0 11897 148958.0 1.0 0 0.0 17 Unmodified _WTAELGIRHV_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 28.49450938151212 0.328477364964909 4 WTAE{I|L}HRR{I|L} 9 4 + 51.702 0.0 0.0 4.3792 4.3792 81.6 0.0 0.0 0.0 29.48349973068489 0.2456819149073652 0.2456819149073652 13.767507096020983 0 0.8091430016092657 1.3010299956639813 0.0 0.0 WTAE{I|L}HRR{I|L};WTAE{I|L}{[VA]|[{I|L}G]}[RH]V;WT[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}RR{I|L};WT{[ES]|[DT]|[{I|L}C]}PHRR{I|L};WTV[DV]HRR{I|L};P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E{I|L}HRR{I|L};PR{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}HRR{I|L};WTV[{I|L}V]RR[HD];{[QG]|[NA]}T[NS]{I|L}HRR{I|L};W[WD]{I|L}HRR{I|L} 4.3792;3.2131;3.0542;2.6213;2.6213;2.1932;1.9383;1.8981;1.6683;1.6092 -;+;-;-;-;-;-;-;-;- + 302 + 1 1.25 98675.1 1.0 7175 4737 11897 HBL1_DMSO_200M_050219_2,11914 HBL1_DMSO_200M_050219_2,11914,WTAELGIRHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11915 64.105 720.0 242780.0 25 0 22583.0 -1 0 132 905.4488231306352 1808.88309332807 2 905.4511596560478 MULTI CID FTMS 0 0 0 11897 123369.53125 0.2261296098575801 6 -0.6385002136230469 18 4 H{I|L}PN{I|L}NEEVHH{[ET]|[MV]}{I|L}Q 15 -1 + 75.019 0.0 0.0 4.1473 4.1473 72.735 0.0 0.0 0.0 32.17461787462604 4.656818820794939 4.656818820794939 4.656818820794939 0 2.135151878060192 1.6989700043360187 0.0 0.8979400086720376 H{I|L}PN{I|L}NEEVHH{[ET]|[MV]}{I|L}Q;H{I|L}PN{I|L}NENCHAQVA[H{I|L}];H{I|L}PN{I|L}NEEV[K{I|L}][C(Carbamidomethyl (C))C]{I|L}Q;H{I|L}PN{I|L}NEE[C(Carbamidomethyl (C))Q]{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;H{I|L}PN{I|L}NEE[C(Carbamidomethyl (C))K]{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;H{I|L}PN{I|L}NEEVA[KC]{[DS]|[MA]|[CV]|TT}{I|L}Q;H{I|L}PN{I|L}NE[HC]NAQVA[H{I|L}];H{I|L}PN{I|L}N[WC(Carbamidomethyl (C))]HAQVA[H{I|L}];H{I|L}PN{I|L}GGENCHAQVA[H{I|L}];H{I|L}PN{I|L}NENCHA[AG]VA[H{I|L}] 4.1473;3.8898;3.8835;3.618;3.618;3.6072;3.4986;3.4544;3.3915;3.3915 -;-;-;-;-;-;-;-;-;- 2936 + 1 1.25 118702.5 1.0 7176 4737 11897 HBL1_DMSO_200M_050219_2,11915 HBL1_DMSO_200M_050219_2,11915, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11916 64.119 719.0 117360.0 25 0 11431.0 -1 0 88 896.8760037713869 1791.7374546095737 2 897.3810302615166 MULTI CID FTMS 0 0 0 11897 123073.3515625 1.0 0 0.0 19 4 {[DA]|[EG]}V 3 -1 29.181 0.0 0.0 1.6287 0.0 0.0 0.0 1503.5814236859987 1503.5814236859987 5.218743591176455 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 {[DA]|[EG]}V 1.6287 - 179 1 1.25 60335.5 1.0 7177 4737 11897 HBL1_DMSO_200M_050219_2,11916 HBL1_DMSO_200M_050219_2,11916, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11917 64.133 800.0 224200.0 25 0 18513.0 + 22432 LPTLAMRV 8 181 450.77106368269534 0 450.7707397341728 PEAK CID FTMS 0 0 0 11897 101750.046875 0.6656184611730068 1 -0.1455879211425781 20 Unmodified _LPTLAMRV_ REV__ENST00000472605.1_1_9:35810342-35810636:-|nuORF 23.1484247019978 0.3584660196589264 4 PVT 3 -1 19.807 0.0 0.0 2.2019 0.0 0.0 113.0851073867354 486.25156580142817 599.3366731881636 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 PVT 2.2019 - 216 + 1 1.25 139480.1 0.9200000166893004 7178 4737 11897 HBL1_DMSO_200M_050219_2,11917 HBL1_DMSO_200M_050219_2,11917,LPTLAMRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11919 64.137 3.8 13584000.0 25 0 1564100.0 19689 LGLRPLHQL 9 67 349.5540861262841 1045.6404289790523 3 349.5539123415947 MULTI CID FTMS 0 0 0 11918 12265781.0 1.0 0 0.0 1 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 30.22481116460888 0.1466181017706357 4 {[VA]|[{I|L}G]}{I|L}E 4 6 38.5 0.0 0.0 3.6819 0.0 0.0 0.0 630.3855599737674 630.3855599737674 18.947340481202065 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}E 3.6819 - 58 + 1 1.252 51326.3 1.0 7179 4738 11918 HBL1_DMSO_200M_050219_2,11919 HBL1_DMSO_200M_050219_2,11919,LGLRPLHQL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11920 64.138 18.0 2524500.0 25 0 207940.0 + 22357 LPSPLKQTI 9 71 498.8081792005347 995.6018054678694 2 498.8084594607353 MULTI CID FTMS 0 0 0 11918 2953633.75 0.0111479611255229 11 -1.0368728637695312 2 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 41.95555342248728 0.0647214845423414 4 {I|L}PSP{I|L}[KQ]T{I|L} 9 0 + 73.4 0.0 0.0 7.3724 7.3724 96.08 0.0 0.0 0.0 56.16418685351597 11.36046240493748 11.36046240493748 73.39956881178352 0 1.1861818737241734 1.6989700043360187 0.4247425010840047 0.0 + + {I|L}PSP{I|L}[KQ]T{I|L} 7.3724 + + 304 + 1 1.252 41791.0 1.0 7180 4738 11918 HBL1_DMSO_200M_050219_2,11920 HBL1_DMSO_200M_050219_2,11920,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 11921 64.139 10.0 5179100.0 25 0 436060.0 + 35729 SVHKGFAFV 9 77 496.2720479643877 0 496.2721740603447 PEAK CID FTMS 0 0 0 11918 4870372.0 1.0 0 0.0 3 Unmodified _SVHKGFAFV_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 43.77239144664712 0.0487019148086553 4 {M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KHD 6 7 27.101 0.0 0.0 2.736 0.0 0.0 117.07837579448774 68.05139337711171 185.12976917159943 0.0 0.0 0.0 0.0 0 1.6549471895720984 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KHD 2.736 - 87 + 1 1.252 45927.1 1.0 7181 4738 11918 HBL1_DMSO_200M_050219_2,11921 HBL1_DMSO_200M_050219_2,11921,SVHKGFAFV True True SVHKGFAFV 64.139303 496.272174060345 87202296.0 11918.0 nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;ENSG00000179172|ENST00000317869|HNRNPCL1;;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;;ENSG00000277058|ENST00000617807|HNRNPCL3;;ENSG00000275774|ENST00000621994|HNRNPCL2;;nc|ENSG00000092199|P07910|HNRNPC;;ENSG00000179412|ENST00000323770|HNRNPCL4 7.707917213439941 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11922 64.14 8.9 4498200.0 25 0 601520.0 + 26285 NQTPVTLQV 9 73 500.2772532570952 998.5399535809904 2 500.2776672244072 MULTI CID FTMS 0 0 0 11918 4631289.5 0.2280932605240409 -2 0.1925582885742187 4 Unmodified _NQTPVTLQV_ ENSG00000063244|ENST00000308924|U2AF2;nc|ENSG00000063244|P26368-2|U2AF2 36.12702656103203 0.0967173616627612 4 {[QN]|[E{I|L}]|[KN]}T[VP]T 6 3 29.129 0.0 0.0 2.9171 0.0 0.0 0.0 355.19910820429044 355.19910820429044 14.07938417338694 0.0 0.0 0.0 0 0.0 0.958607314841775 0.5 0.6382104921644451 + {[QN]|[E{I|L}]|[KN]}T[VP]T 2.9171 + + 58 1 1.252 37475.5 1.0 7182 4738 11918 HBL1_DMSO_200M_050219_2,11922 HBL1_DMSO_200M_050219_2,11922,NQTPVTLQV True True NQTPVTLQV 64.14048 500.277667224407 348521056.0 11918.0 nc|ENSG00000063244|P26368-2|U2AF2;;ENSG00000063244|ENST00000308924|U2AF2 6.916941324869792 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11923 64.142 15.0 4013900.0 25 0 339490.0 + 3064 AVLPRLHQL 9 77 523.8263267544773 1045.6381005757546 2 523.8270141482353 MULTI CID FTMS 0 0 0 11918 3549918.5 1.0 0 0.0 5 Unmodified _AVLPRLHQL_ ENSG00000117395|ENST00000236051|EBNA1BP2;ENST00000463906.1_1_1:43630116-43636618:-|nuORF 78.14939416004806 0.0179651292570206 4 {[VA]|[{I|L}G]}{I|L}PR{I|L}HQ{I|L} 9 0 + 53.923 0.0 0.0 5.157 5.157 82.154 0.0 0.0 0.0 14.240413232678684 27.981231377493074 14.240413232678684 9.208187539523747 0 1.885151878060192 1.6989700043360187 0.0 0.0 + + {[VA]|[{I|L}G]}{I|L}PR{I|L}HQ{I|L};{[VA]|[{I|L}G]}{I|L}PR{I|L}H[AG]{I|L} 5.157;4.2764 +;- + 132 1 1.252 51934.3 1.0 7183 4738 11918 HBL1_DMSO_200M_050219_2,11923 HBL1_DMSO_200M_050219_2,11923,AVLPRLHQL True True AVLPRLHQL 64.141659 523.827014148235 491328984.0 11918.0 ENST00000463906.1_1_1:43630116-43636618:-|nuORF;;ENSG00000117395|ENST00000236051|EBNA1BP2 6.906899293263753 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11924 64.143 60.0 967000.0 25 0 93255.0 + 254 ADAPIVAHL 9 77 453.7558059840875 905.497059034975 2 453.7559692263603 MULTI CID FTMS 0 0 0 11918 872584.3125 0.2049273664328528 -3 0.3529586791992187 6 Unmodified _ADAPIVAHL_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 56.541270873467816 0.0279970378729908 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L}VAH{I|L} 8 2 + 45.277 0.0 0.0 5.0002 5.0002 86.52 0.0 0.0 0.0 15.611081072782092 8.1437180047066 8.1437180047066 45.27684351791259 0 0.5891368308784531 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L}VAH{I|L} 5.0002 - 173 + 1 1.252 51506.1 1.0 7184 4738 11918 HBL1_DMSO_200M_050219_2,11924 HBL1_DMSO_200M_050219_2,11924,ADAPIVAHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11925 64.145 66.0 660220.0 25 0 45656.0 + 45822 YYPAQGVQQF 10 80 600.7879834055838 1199.5614138779674 2 600.7882568240166 MULTI CID FTMS 0 0 0 11918 826490.1875 0.610465686887767 2 -0.1902999877929687 7 Unmodified _YYPAQGVQQF_ ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 20.453626601364224 0.5043500229302764 4 YY[RH]QVG 7 6 36.853 0.0 0.0 3.0722 0.0 0.0 0.0 293.12616907291255 293.12616907291255 17.65703808010521 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 YY[RH]QVG 3.0722 - 378 + 1 1.252 35948.0 1.0 7185 4738 11918 HBL1_DMSO_200M_050219_2,11925 HBL1_DMSO_200M_050219_2,11925,YYPAQGVQQF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11926 64.146 65.0 574280.0 25 0 36487.0 + -1 LSFSFACCNV 10 77 574.2492828454451 1146.4840127576902 2 574.2498657107353 MULTI CID FTMS 0 0 0 11918 722952.0625 0.7429516714116902 -3 0.3529586791992187 8 Carbamidomethyl (C) _LSFSFAC(Carbamidomethyl (C))CNV_ REV__ENSG00000196151|ENST00000359774|WDSUB1;REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1 13.042465956692816 0.6287021003332052 4 S{I|L}YTV 5 -1 46.32 0.0 0.0 4.0402 0.0 0.0 565.1881407740767 0.0 565.1881407740767 0.0 19.15299099427419 0.0 0.0 0 1.3807196863200843 0.0 0.8703715150305281 0.0 S{I|L}YTV 4.0402 - 131 + 1 1.252 34442.2 1.0 7186 4738 11918 HBL1_DMSO_200M_050219_2,11926 HBL1_DMSO_200M_050219_2,11926,LSFSFACCNV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11927 64.148 96.0 751440.0 25 0 174480.0 + 33662 SITSELHAV 9 95 478.7551894628542 955.4958259925083 2 478.7565795779228 MULTI CID FTMS 0 0 0 11918 676759.25 1.0 0 0.0 9 Unmodified _SITSELHAV_ ENSG00000004700|ENST00000444129|RECQL 26.88365393820708 0.1891292719743517 4 {[TV]|[{I|L}S]}TSE{I|L}GH{I|L} 9 3 + 48.293 0.0 0.0 5.0542 5.0542 79.518 0.0 0.0 0.0 21.15262660587579 6.209663131023184 6.209663131023184 7.723989214945526 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}TSE{I|L}GH{I|L};{[TV]|[{I|L}S]}TSE{I|L}[HA]V;{[TV]|[{I|L}S]}[WM]{I|L}GH{I|L};{[TV]|[{I|L}S]}TS[W{I|L}]H{I|L};{[TV]|[{I|L}S]}[WM]{I|L}[HA]V;{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}[HV]SPV 5.0542;4.2458;3.3309;3.0439;2.5225;1.714 -;+;-;-;-;- + 379 + 1 1.252 58519.2 1.0 7187 4738 11918 HBL1_DMSO_200M_050219_2,11927 HBL1_DMSO_200M_050219_2,11927,SITSELHAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11928 64.15 64.0 776280.0 25 0 94997.0 + 21344 LPFFLPFFL 9 85 570.8279630547713 1139.6413731763423 2 570.8291503787041 MULTI CID FTMS 0 0 0 11918 632632.4375 0.9777039373032748 1 -0.093963623046875 10 Unmodified _LPFFLPFFL_ REV__ENST00000492816.6_1_2:216257645-216258011:-|nuORF 20.871210003555333 0.2717241269066626 4 [{I|L}P]S 3 -1 27.447 0.0 0.0 2.4084 0.0 0.0 0.0 839.4488737469081 839.4488737469081 9.704999916446797 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P]S 2.4084 - 86 1 1.252 44204.1 1.0 7188 4738 11918 HBL1_DMSO_200M_050219_2,11928 HBL1_DMSO_200M_050219_2,11928,LPFFLPFFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11929 64.152 109.0 530980.0 25 0 49056.0 36341 SYNYLDPNYF 10 92 648.2811785899519 1294.5478042467037 2 648.2815429568291 MULTI CID FTMS 0 0 0 11918 500327.625 0.3809593832956097 1 -0.093963623046875 11 Unmodified _SYNYLDPNYF_ ENSG00000036549|ENST00000370801|ZZZ3;nc|ENSG00000036549|Q8IYH5-2|ZZZ3;nc|ENSG00000036549|Q8IYH5-3|ZZZ3 18.1463463914782 0.5430639438673815 4 SY{M(Oxidation (M))|F} 3 7 38.94 0.0 0.0 3.008 0.0 0.0 879.3678897144376 0.0 879.3678897144376 0.0 12.513487579716768 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 SY{M(Oxidation (M))|F} 3.008 - 155 1 1.252 48195.2 1.0 7189 4738 11918 HBL1_DMSO_200M_050219_2,11929 HBL1_DMSO_200M_050219_2,11929,SYNYLDPNYF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11930 64.156 174.0 522070.0 25 0 64489.0 + 17954 KQYGNEVFLA 10 99 584.8035262417559 1167.5924995503117 2 584.8040649294853 MULTI CID FTMS 0 0 0 11918 450207.28125 0.9589136915756284 -1 0.1455879211425781 12 Unmodified _KQYGNEVFLA_ ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 65.23502041540118 0.0228537820337083 4 {[DA]|[EG]}[YN]QKV{M(Oxidation (M))|F}A{I|L} 10 7 + 42.321 0.0 0.0 3.6246 3.6246 75.084 0.0 0.0 0.0 1.583669018372511 29.69101594344646 1.583669018372511 8.750612633917001 0 0.8851518780601922 0.0 0.8829131673969606 1.0994850021680094 {[DA]|[EG]}[YN]QKV{M(Oxidation (M))|F}A{I|L};[TP][NP][Y{M(Oxidation (M))|F}]V{M(Oxidation (M))|F}A{I|L};{[DA]|[EG]}[YN][AG]KV{M(Oxidation (M))|F}A{I|L};{[DA]|[EG]}[RV]{[YD]|[{M(Oxidation (M))|F}M]}V{M(Oxidation (M))|F}A{I|L};[{M(Oxidation (M))|F}V]Y[Y{M(Oxidation (M))|F}]V{M(Oxidation (M))|F}A{I|L};{[DA]|[EG]}[RV]V{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}A{I|L};{[DA]|[EG]}[YN]V[KQ]{M(Oxidation (M))|F}A{I|L} 3.6246;2.8752;2.8397;2.4513;2.1302;1.6677;1.5425 -;-;-;-;-;-;- 236 1 1.252 72023.1 1.0 7190 4738 11918 HBL1_DMSO_200M_050219_2,11930 HBL1_DMSO_200M_050219_2,11930,KQYGNEVFLA True True KQYGNEVFLA 64.155665 584.804064929485 9770677.0 11918.0 ENST00000484403.5_1_21:30439206-30445917:-|nuORF;;nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 6.13528315226237 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11931 64.16 218.0 351330.0 25 0 47820.0 + 42542 VTMRCDSL 8 91 462.7167130776991 923.4188732221984 2 462.7166015505791 MULTI CID FTMS 0 0 0 11918 419866.15625 0.882310233142716 -1 0.1455879211425781 13 Unmodified _VTMRCDSL_ REV__ENSG00000198722|ENST00000635942|UNC13B 13.50788311687929 0.7113601687236069 4 VQ 2 -1 25.217 0.0 0.0 2.7308 0.0 0.0 0.0 693.2689899434429 693.2689899434429 7.257724967479859 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 VQ 2.7308 - 65 + 1 1.252 66372.6 1.0 7191 4738 11918 HBL1_DMSO_200M_050219_2,11931 HBL1_DMSO_200M_050219_2,11931,VTMRCDSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11932 64.168 463.0 375370.0 25 0 42038.0 + 40777 VILEGELERA 10 133 564.8169523811702 1127.6193518291402 2 564.8171874880791 MULTI CID FTMS 0 0 0 11918 381719.0 1.0 0 0.0 14 Unmodified _VLLERPCWL_ ENST00000587201.5_1_19:16187360-16198908:+|nuORF;ENSG00000167460|ENST00000643579|TPM4;nc|ENSG00000167460|P67936-2|TPM4;ENST00000520239.1_1_8:70041855-70042335:+|nuORF 61.357469665136826 0.0253304979873734 4 V{I|L}{I|L}EGE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 10 4 + 99.201 0.0 0.0 8.7974 8.7974 81.819 0.0 0.0 0.0 78.73712505420023 7.340059088363233 7.340059088363233 1.2763625255165325 0 1.25 2.0 0.8494850021680094 0.7059771852360797 V{I|L}{I|L}EGE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}EAD{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}ADE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}EW{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}AED{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}WE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}A{I|L}DE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}A{I|L}ED{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};V{I|L}{I|L}EG[NP]HH{I|L};V{I|L}{I|L}EG[QT]QQ{I|L} 8.7974;8.6842;8.2205;8.2181;8.1073;7.6412;7.4434;7.3302;7.2453;7.0486 -;-;-;-;-;-;-;-;-;- 1649 + 1 1.252 135329.6 1.0 7192 4738 11918 HBL1_DMSO_200M_050219_2,11932 HBL1_DMSO_200M_050219_2,11932,VLLERPCWL True True VILEGELERA 64.167982 564.817187488079 2503221.25 11918.0 ENST00000587201.5_1_19:16187360-16198908:+|nuORF;;ENSG00000167460|ENST00000643579|TPM4;;nc|ENSG00000167460|P67936-2|TPM4;;ENST00000520239.1_1_8:70041855-70042335:+|nuORF 5.566027005513509 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11933 64.172 238.0 671450.0 25 0 77225.0 + 41453 VPLNLSRLI 9 122 342.2217308819127 1023.6433632459382 3 342.2215148806572 MULTI CID FTMS 0 0 0 11918 301253.90625 0.8004200822462485 -2 0.1925582885742187 15 Unmodified _VPLNLSRLI_ REV__ENSG00000068878|ENST00000404125|PSME4 12.872603262515298 0.4882369880199512 4 VPDAK{I|L}R{I|L}{I|L} 9 -1 + 57.08 0.0 0.0 5.5762 5.5762 87.355 0.0 0.0 0.0 31.13798466605289 7.324930384796822 7.324930384796822 18.750612633917 0 0.0 0.0 0.7059771852360797 0.0 VPDAK{I|L}R{I|L}{I|L};VPD{I|L}[KA]R{I|L}{I|L};VP{I|L}[NS]{I|L}R{I|L}{I|L};VP{I|L}D[KA]R{I|L}{I|L};V{I|L}P[NS]{I|L}R{I|L}{I|L};V{I|L}PD[KA]R{I|L}{I|L};[{I|L}A][RK]{I|L}{NN|[MP]|[D{I|L}]|[EV]}PV;[KA][R{I|L}]{I|L}{NN|[MP]|[D{I|L}]|[EV]}PV 5.5762;3.7444;3.4503;3.1563;2.6665;2.3724;0.99341;0.24353 -;-;-;-;-;-;-;- 333 + 1 1.252 135143.9 1.0 7193 4738 11918 HBL1_DMSO_200M_050219_2,11933 HBL1_DMSO_200M_050219_2,11933,VPLNLSRLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11934 64.185 697.0 172050.0 25 0 17072.0 -1 0 103 964.4447607727724 2890.312452918517 3 964.7802001833916 MULTI CID FTMS 0 0 0 11918 231425.296875 0.275831022949785 -5 0.5457305908203125 16 4 [NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}D{M(Oxidation (M))|F}V[Y{I|L}]YW 12 -1 29.112 0.0 0.0 1.0072 0.0 0.0 0.0 1298.5488780496296 1298.5488780496296 16.153405663681095 0.0 0.0 0.0 0 0.5 0.0 0.2887254899964357 0.6989700043360187 [NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}D{M(Oxidation (M))|F}V[Y{I|L}]YW 1.0072 - 2319 1 1.252 90468.0 1.0 7194 4738 11918 HBL1_DMSO_200M_050219_2,11934 HBL1_DMSO_200M_050219_2,11934, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11935 64.189 215.0 962920.0 25 0 70180.0 + 27855 PLRLHGAI 8 140 438.7763754531992 0 438.7767516970634 PEAK CID FTMS 0 0 0 11918 198648.3125 1.0 0 0.0 17 Unmodified _PLRLHGAI_ REV__ENST00000411753.1_1_3:31494580-31495033:+|nuORF 24.67388899826682 0.3296343502680589 4 E{I|L}H 3 -1 16.995 0.0 0.0 1.9411 0.0 0.0 130.11267369991282 363.21503626041255 493.32770996032536 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 E{I|L}H 1.9411 - 306 + 1 1.252 163169.8 1.0 7195 4738 11918 HBL1_DMSO_200M_050219_2,11935 HBL1_DMSO_200M_050219_2,11935,PLRLHGAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11936 64.199 603.0 198490.0 25 0 27836.0 + 32118 RVMEYINRL 9 122 597.3262260283174 1192.6378991234346 2 597.3272582888603 MULTI CID FTMS 0 0 0 11918 204675.859375 0.1421799263175206 2 -0.1902999877929687 18 Unmodified _RVMEYINRL_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 21.59015148037692 0.2564810811560323 4 [VG]V 3 8 18.829 0.0 0.0 1.5788 0.0 0.0 0.0 934.4472139947874 934.4472139947874 0.224155302582151 0.0 0.0 0.0 0 0.2887254899964357 1.3010299956639813 0.0 0.0 [VG]V 1.5788 - 592 + 1 1.252 93478.7 1.0 7196 4738 11918 HBL1_DMSO_200M_050219_2,11936 HBL1_DMSO_200M_050219_2,11936,RVMEYINRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11937 64.213 711.0 188650.0 25 0 9302.5 + -1 LTECMPKLM 9 182 561.7713110469138 1121.5280691606274 2 561.7732421755791 MULTI CID FTMS 0 0 0 11918 113029.5546875 0.3077280590942024 3 -0.3022308349609375 19 Carbamidomethyl (C) _LTEC(Carbamidomethyl (C))MPKLM_ REV__ENSG00000198862|ENST00000361371|LTN1;REV__nc|ENSG00000198862|O94822-3|LTN1 21.74664581756881 0.2544899275067181 4 [{I|L}P][WQ]WPPV 8 -1 28.874 0.0 0.0 2.5745 0.0 0.0 0.0 114.9791875233781 114.9791875233781 -1.5110073963751347 0.0 -1.5110073963751347 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}P][WQ]WPPV 2.5745 - 9321 1 1.252 108696.3 1.0 7197 4738 11918 HBL1_DMSO_200M_050219_2,11937 HBL1_DMSO_200M_050219_2,11937,LTECMPKLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11938 64.227 800.0 207290.0 25 0 9824.9 + 38665 TTKQFNAVISL 11 165 611.3463958809319 1220.6782388286638 2 611.3472778201103 MULTI CID FTMS 0 0 0 11918 98596.5546875 1.0 0 0.0 20 Unmodified _TTKQFNAVISL_ REV__ENSG00000156171|ENST00000484310|DRAM2 17.11289562659939 0.6791789249425932 4 [{I|L}V]{I|L}PAHWWTV 10 -1 + 43.893 0.0 0.0 3.5957 3.5957 64.835 0.0 0.0 0.0 7.699178382953058 7.323937598229691 7.323937598229691 1.212600430434705 0 0.3807196863200844 2.0 0.3252574989159953 0.0 [{I|L}V]{I|L}PAHWWTV;[{I|L}V][YR]VWWTV;[{I|L}V][HV]TM[KG]HTV;[{I|L}V]{I|L}[W{M(Oxidation (M))|F}]{[QD]|[EN]|[WG]|[KD]|[RS]}TTV;[{I|L}V]{I|L}PAHWWS{I|L};[{I|L}V]{I|L}PAH{I|L}T{[CA]|SS}SP;[{I|L}V]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[YE]TTV;[{I|L}V][YR]VWWS{I|L};[{I|L}V][YR]V{I|L}T{[CA]|SS}SP;[{I|L}V]{I|L}[HS]M[KG]HTV 3.5957;3.4964;3.0916;3.0857;2.9958;2.9765;2.9185;2.8964;2.8706;2.845 -;-;-;-;-;-;-;-;-;- 2474 + 1 1.252 123129.3 0.9100000262260436 7198 4738 11918 HBL1_DMSO_200M_050219_2,11938 HBL1_DMSO_200M_050219_2,11938,TTKQFNAVISL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11940 64.231 6.7 7154500.0 25 0 869800.0 + 38069 TPHDFIEHI 9 75 370.1857910015866 1107.53554360496 3 370.1857787966728 MULTI CID FTMS 0 0 0 11939 5301189.5 0.5949908633277061 1 -0.0963363647460937 1 Unmodified _TPHDFIEHI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 37.97399986684836 0.0865783450051559 4 TPHD{M(Oxidation (M))|F}{I|L}E{I|L}H 9 2 + 54.874 0.0 0.0 4.9546 4.9546 71.159 0.0 0.0 0.0 16.478174818886373 1.890562362200491 1.890562362200491 1.890562362200491 0 0.5 0.0 0.4247425010840047 0.0 TPHD{M(Oxidation (M))|F}{I|L}E{I|L}H;TPHD{M(Oxidation (M))|F}{I|L}EH{I|L};T[WY]{M(Oxidation (M))|F}{I|L}E{I|L}H;T[WY]{M(Oxidation (M))|F}{I|L}EH{I|L};TPH[H{I|L}][C(Carbamidomethyl (C))K]C{I|L};[HD]P{M(Oxidation (M))|F}{I|L}[Y{M(Oxidation (M))|F}]G{I|L};[WY]{M(Oxidation (M))|F}{I|L}[Y{M(Oxidation (M))|F}]G{I|L} 4.9546;4.7839;2.9485;2.7778;1.6089;0.45643;0.22238 -;+;-;-;-;-;- + 212 + 1 1.252 47114.8 1.0 7199 4739 11939 HBL1_DMSO_200M_050219_2,11940 HBL1_DMSO_200M_050219_2,11940,TPHDFIEHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11941 64.232 13.0 3013800.0 25 0 457410.0 + 12381 GTIDEIQKL 9 83 508.78524710371744 1015.5559412742348 2 508.7853576540947 MULTI CID FTMS 0 0 0 11939 3001363.25 0.1483239617047294 2 -0.2082672119140625 2 Unmodified _GTIDEIQKL_ ENSG00000167986|ENST00000301764|DDB1 38.17557092003332 0.0854718145212029 4 {[SA]|[TG]}{I|L}DE{I|L}QK{I|L} 9 0 + 65.429 0.0 0.0 6.4427 6.4427 87.366 0.0 0.0 0.0 52.26866683161987 10.747534640495182 10.747534640495182 9.208187539523747 0 0.3252574989159953 1.3979400086720375 0.4247425010840047 0.3807196863200844 + + {[SA]|[TG]}{I|L}DE{I|L}QK{I|L};{[SA]|[TG]}{I|L}DE{I|L}[AG]K{I|L};[KQ]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RP];[Q{I|L}]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[RP] 6.4427;5.536;1.9326;1.4893 +;-;-;- + 106 + 1 1.252 37371.3 1.0 7200 4739 11939 HBL1_DMSO_200M_050219_2,11941 HBL1_DMSO_200M_050219_2,11941,GTIDEIQKL True True GTIDEIQKL 64.232088 508.785357654095 291139296.0 11939.0 ENSG00000167986|ENST00000301764|DDB1 5.997111956278483 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11942 64.233 14.0 4616700.0 25 0 571490.0 + 35778 SVIPQIQKV 9 79 506.3137288240521 1010.6129047149044 2 506.3139831423759 MULTI CID FTMS 0 0 0 11939 3836985.5 1.0 0 0.0 3 Unmodified _SVIPQIQKV_ ENSG00000151876|ENST00000281623|FBXO4;nc|ENSG00000151876|Q9UKT5-2|FBXO4 43.85829265575387 0.0542763391141878 4 [VS]{I|L}PQ{I|L}QKV 9 0 + 64.792 0.0 0.0 6.4111 6.4111 87.246 0.0 0.0 0.0 30.975409843999337 8.372505457509973 8.372505457509973 9.208187539523747 0 0.9247425010840048 1.6989700043360187 0.0 0.7742275032520141 + + [VS]{I|L}PQ{I|L}QKV;[VS]{I|L}PQ{I|L}[AG]KV;[VS]{I|L}P[AG]{I|L}QKV;[VS]{I|L}P[AG]{I|L}[AG]KV 6.4111;5.5;5.5;4.5931 +;-;-;- + 177 + 1 1.252 57038.7 1.0 7201 4739 11939 HBL1_DMSO_200M_050219_2,11942 HBL1_DMSO_200M_050219_2,11942,SVIPQIQKV True True SVIPQIQKV 64.233267 506.313983142376 173712000.0 11939.0 nc|ENSG00000151876|Q9UKT5-2|FBXO4;;ENSG00000151876|ENST00000281623|FBXO4 6.872678279876709 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11943 64.234 21.0 2829000.0 25 0 430150.0 + 38071 TPHDFIEHI 9 85 554.7745663087271 1107.534579684254 2 554.7749511599541 MULTI CID FTMS 0 0 0 11939 2452387.5 0.610000664129047 1 -0.0963363647460937 4 Unmodified _TPHDFIEHI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 58.6788170122104 0.0268135626297836 4 [TP]HD{M(Oxidation (M))|F}{I|L}EH{I|L} 9 0 + 63.643 0.0 0.0 5.7463 5.7463 77.234 0.0 0.0 0.0 5.116640162847915 3.2390874094431865 3.2390874094431865 3.2390874094431865 0 1.7059771852360797 1.6989700043360187 0.3252574989159953 0.0 + + [TP]HD{M(Oxidation (M))|F}{I|L}EH{I|L};[TP]HD{M(Oxidation (M))|F}{I|L}E{I|L}H;[TP][WQ]TPEH{I|L};[TP][QA]{I|L}CPEH{I|L};[HD]{M(Oxidation (M))|F}{I|L}TPEH{I|L};[TP][WQ]EHPT{I|L};[TP][QA]{I|L}{M(Oxidation (M))|F}DCT{I|L};[H{I|L}]E{M(Oxidation (M))|F}SPEH{I|L};[TP][QA]PC{I|L}EH{I|L};[HD]{M(Oxidation (M))|F}{I|L}EHPT{I|L} 5.7463;5.4539;5.2843;4.9689;4.9641;4.7455;4.7214;4.6636;4.5763;4.4253 +;-;-;-;-;-;-;-;-;- + 499 + 1 1.252 54710.1 1.0 7202 4739 11939 HBL1_DMSO_200M_050219_2,11943 HBL1_DMSO_200M_050219_2,11943,TPHDFIEHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11944 64.236 25.0 2127400.0 25 0 140170.0 + 9823 FPDPNVKYV 9 80 539.7824019990643 1077.5502510649285 2 539.7823974490166 MULTI CID FTMS 0 0 0 11939 1922603.5 0.5552871210577007 2 -0.2082672119140625 5 Unmodified _FPDPNVKYV_ ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF 41.95555342248728 0.0647214845423414 4 [DP]NVP{M(Oxidation (M))|F}KYV 9 4 + 52.2 0.0 0.0 4.8444 4.8444 74.089 0.0 0.0 0.0 6.933115814076345 8.479239171616236 6.933115814076345 3.679767852945943 0 1.0138793319624575 1.3979400086720375 0.0 0.0 [DP]NVP{M(Oxidation (M))|F}KYV;[DP]NPV{M(Oxidation (M))|F}KYV;[DP]{M(Oxidation (M))|F}[NP]VKYV;[DP]NVPK{M(Oxidation (M))|F}YV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[NP]VKYV;[DP]GGVP{M(Oxidation (M))|F}KYV;[DP]NP{M(Oxidation (M))|F}VKYV;[DP]NPVK{M(Oxidation (M))|F}YV;[DP]GGPV{M(Oxidation (M))|F}KYV;[DP]GGVPK{M(Oxidation (M))|F}YV 4.8444;4.5029;4.2904;4.2117;4.2009;3.9898;3.9441;3.8702;3.6483;3.3571 -;-;-;-;+;-;-;-;-;- + 513 1 1.252 49136.4 1.0 7203 4739 11939 HBL1_DMSO_200M_050219_2,11944 HBL1_DMSO_200M_050219_2,11944,FPDPNVKYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11945 64.241 311.0 834320.0 25 0 209230.0 -1 0 61 1185.4822243504611 3553.424843651584 3 1185.816943347454 MULTI CID FTMS 0 0 0 11939 1211062.625 0.5640621013766526 1 -0.0963363647460937 6 4 VS{I|L} 3 -1 7.7782 0.0 0.0 0.21889 0.0 0.0 2165.771475586934 1085.4550264947875 3251.2265020817213 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 VS{I|L} 0.21889 - 57 + 1 1.252 207279.6 1.0 7204 4739 11939 HBL1_DMSO_200M_050219_2,11945 HBL1_DMSO_200M_050219_2,11945, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11946 64.243 41.0 1127900.0 25 0 84505.0 + 44526 YPDRNLPTI 9 87 544.7894064442501 1087.5642599553 2 544.7903320193291 MULTI CID FTMS 0 0 0 11939 1168872.375 0.2573875427782855 5 -0.511962890625 7 Unmodified _YPDRNLPTI_ ENSG00000115539|ENST00000264254|PDCL3 47.594388314883695 0.0456443387682827 4 [TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}YPT{I|L} 9 4 + 63.241 0.0 0.0 5.8149 5.8149 83.053 0.0 0.0 0.0 6.120280792130544 2.817883583469083 2.817883583469083 8.010299956639813 0 1.2059771852360797 1.0969100130080565 0.6109243748081782 0.0 [TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}YPT{I|L};[TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}PYT{I|L};[TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}PTY{I|L};[TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}PT{I|L}Y;[TP]{I|L}QQYPE{I|L};[EP]{[DS]|[MA]|[CV]|TT}[WK]{I|L}T{I|L};[TP]{I|L}QQ[C(Carbamidomethyl (C))K]T{I|L};{[QN]|[E{I|L}]|[KN]}H{[YC]|[HE]}{I|L}PT{I|L};[TP]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}[DV]{I|L};[TP]{I|L}QQ[EP]Y{I|L} 5.8149;5.0784;4.6109;4.1524;3.8979;3.4411;3.3543;3.02;2.9151;2.8869 -;-;-;-;-;-;-;-;-;- 397 1 1.252 44795.4 1.0 7205 4739 11939 HBL1_DMSO_200M_050219_2,11946 HBL1_DMSO_200M_050219_2,11946,YPDRNLPTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11947 64.244 43.0 1234500.0 25 0 160910.0 24038 LWALLVYNA 9 72 531.8007617129515 1061.586970492703 2 531.8012573122978 MULTI CID FTMS 0 0 0 11939 1104004.75 0.0149708518497384 6 -0.5920867919921875 8 Unmodified _LWALLVYNA_ ENSG00000112414|ENST00000367609|ADGRG6;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6 30.22481116460888 0.1466181017706357 4 VVYNA 5 5 46.454 0.0 0.0 4.3759 0.0 0.0 497.2971989192238 0.0 497.2971989192238 0.0 35.996075289514096 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 VVYNA 4.3759 - 36 1 1.252 47164.8 1.0 7206 4739 11939 HBL1_DMSO_200M_050219_2,11947 HBL1_DMSO_200M_050219_2,11947,LWALLVYNA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11948 64.245 57.0 841560.0 25 0 103040.0 + 37187 TIERLFHGY 9 72 568.2990882343107 1134.583623535421 2 568.2999755740166 MULTI CID FTMS 0 0 0 11939 942088.0625 0.0807069319917474 6 -0.5920867919921875 9 Unmodified _TIERLFHGY_ REV__ENSG00000120594|ENST00000377252|PLXDC2;REV__ENST00000377238.2_1_10:20332341-20568745:+|nuORF;REV__nc|ENSG00000120594|Q6UX71-2|PLXDC2 13.50788311687929 0.4710407108020397 4 [{I|L}T]WW{I|L}T 6 -1 20.747 0.0 0.0 1.8286 0.0 0.0 0.0 331.1522019868464 331.1522019868464 8.756980692041925 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.6643943297944485 0.0 [{I|L}T]WW{I|L}T 1.8286 - 77 1 1.252 42246.7 1.0 7207 4739 11939 HBL1_DMSO_200M_050219_2,11948 HBL1_DMSO_200M_050219_2,11948,TIERLFHGY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11949 64.247 59.0 1344800.0 25 0 143300.0 22671 LPYSRPIV 8 74 472.7824971831464 943.5504414330928 2 472.7827331423759 MULTI CID FTMS 0 0 0 11939 923999.125 0.3196459554456704 -2 0.2395515441894531 10 Unmodified _LPYSRPIV_ ENSG00000204195|ENST00000374521|AWAT1 26.88365393820708 0.4786498634179528 4 {I|L}PYSK 5 4 61.52 0.0 0.0 6.52 0.0 0.0 0.0 352.2097567193969 352.2097567193969 35.577781952643655 0.0 0.0 0.0 0 0.6549471895720984 1.6989700043360187 0.4247425010840047 0.0 {I|L}PYSK 6.52 - 75 + 1 1.252 66785.9 1.0 7208 4739 11939 HBL1_DMSO_200M_050219_2,11949 HBL1_DMSO_200M_050219_2,11949,LPYSRPIV False True DMYLAPHV 64.246634 472.782733142376 5171697.0 11939.0 nc|ENSG00000169727|Q13098-7|GPS1;;nc|ENSG00000169727|Q13098-6|GPS1;;nc|ENSG00000169727|Q13098|GPS1;;ENSG00000169727|ENST00000578552|GPS1 2.0412094593048096 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11950 64.249 105.0 721980.0 25 0 93319.0 -1 0 70 603.9677535467044 1808.8814312403133 3 604.3011352419853 MULTI CID FTMS 0 0 0 11939 737088.625 0.2541244139378583 8 -0.7673492431640625 11 4 EQC(Carbamidomethyl (C)){I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q 8 -1 43.083 0.0 0.0 2.3818 0.0 0.0 817.4095206951946 0.0 817.4095206951946 0.0 29.89577516576788 0.0 0.0 0 1.0 0.0 0.0 0.75 EQC(Carbamidomethyl (C)){I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q 2.3818 - 247 + 1 1.252 60978.2 1.0 7209 4739 11939 HBL1_DMSO_200M_050219_2,11950 HBL1_DMSO_200M_050219_2,11950, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11951 64.25 60.0 914040.0 25 0 89953.0 + 12221 GQTSVIEQI 9 100 487.7618240901445 973.509095247089 2 487.7619506716728 MULTI CID FTMS 0 0 0 11939 666352.9375 0.9727660288855932 -1 0.093963623046875 12 Unmodified _GQTSVIEQI_ ENSG00000077150|ENST00000661543|NFKB2;nc|ENSG00000077150|Q00653-4|NFKB2 25.399314129420983 0.2080152500878129 4 [WC(Carbamidomethyl (C))]{I|L}[VG]VQ{I|L} 8 6 + 21.375 0.0 0.0 2.1957 2.1957 70.301 0.0 0.0 0.0 1.4266750356873104 8.935530465182847 1.4266750356873104 6.409780573583319 0 0.0 0.0 0.0 0.5 [WC(Carbamidomethyl (C))]{I|L}[VG]VQ{I|L};[WC(Carbamidomethyl (C))][R{I|L}]VQ{I|L};[WC(Carbamidomethyl (C))]{I|L}[VG]V[AG]{I|L};[WC(Carbamidomethyl (C))][R{I|L}]V[AG]{I|L} 2.1957;1.5373;0.73066;0.065214 -;-;-;- 184 + 1 1.252 48210.5 1.0 7210 4739 11939 HBL1_DMSO_200M_050219_2,11951 HBL1_DMSO_200M_050219_2,11951,GQTSVIEQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11952 64.252 52.0 843370.0 25 0 58697.0 -1 YPSLPTMTV 9 90 512.7547328345664 1023.4949127359328 2 512.7551757693291 MULTI CID FTMS 0 0 0 11939 507390.4375 0.6957185899640976 -2 0.2395515441894531 13 Oxidation (M) _YPSLPTM(Oxidation (M))TV_ ENSG00000089289|ENST00000356413|IGBP1 30.22481116460888 0.1466181017706357 4 {NN|[MP]|[D{I|L}]|[EV]}Y[PG]{I|L}{M(Oxidation (M))|F}S{I|L} 9 -1 {NN|[MP]|[D{I|L}]|[EV]}Y[PG]{I|L}{M(Oxidation (M))|F} + + 16.281 16.904 2.0989 1.5908 1.5908 44.36 0.0 0.0 0.0 0.0 3.7429201993642094 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}Y[PG]{I|L}{M(Oxidation (M))|F}S{I|L} 1.5908 - 283 + 1 1.252 40560.1 1.0 7211 4739 11939 HBL1_DMSO_200M_050219_2,11952 HBL1_DMSO_200M_050219_2,11952,YPSLPTMTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11953 64.263 647.0 363650.0 25 0 12712.0 -1 0 163 946.4338755915334 1890.8531982498664 2 946.9371215701104 MULTI CID FTMS 0 0 0 11939 312610.65625 0.4739973245688767 -1 0.093963623046875 14 4 NMPN{I|L}NEE[RP]EEN{I|L} 14 -1 116.71 0.0 0.0 6.1721 0.0 0.0 0.0 208.07317529849848 208.07317529849848 55.74624095724535 0.0 0.0 0.0 0 1.1382104921644451 1.5228787452803376 0.3054621874040891 2.595278878751137 NMPN{I|L}NEE[RP]EEN{I|L} 6.1721 - 58170 + 1 1.252 152611.3 1.0 7212 4739 11939 HBL1_DMSO_200M_050219_2,11953 HBL1_DMSO_200M_050219_2,11953, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11954 64.275 679.0 272930.0 25 0 31325.0 + 23543 LTLLYHELDA 10 155 594.3170250438789 1186.6194971545576 2 594.3161498904228 MULTI CID FTMS 0 0 0 11939 187516.921875 0.8702288930527196 -1 0.093963623046875 15 Unmodified _LTLLYHELDA_ REV__ENSG00000166106|ENST00000299164|ADAMTS15 36.12702656103203 0.1984647928738587 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}QDAT{I|L}{I|L}DA 11 -1 + 85.424 0.0 0.0 7.199 7.199 85.4 0.0 0.0 0.0 5.35113201697348 6.575773191777927 5.35113201697348 5.35113201697348 0 0.8807196863200843 1.154901959985743 0.8807196863200843 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}QDAT{I|L}{I|L}DA;{I|L}{I|L}DQDAT{I|L}{I|L}DA;{NN|[MP]|[D{I|L}]|[EV]}{I|L}QWT{I|L}{I|L}DA;{[QN]|[E{I|L}]|[KN]}VQDAT{I|L}{I|L}DA;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[AG]DAT{I|L}{I|L}DA;{NN|[MP]|[D{I|L}]|[EV]}A{[VA]|[{I|L}G]}DAT{I|L}{I|L}DA;{I|L}{I|L}DQWT{I|L}{I|L}DA;{[QN]|[E{I|L}]|[KN]}VQWT{I|L}{I|L}DA;{I|L}{I|L}D[AG]DAT{I|L}{I|L}DA;{[DA]|[EG]}{I|L}{[VA]|[{I|L}G]}DAT{I|L}{I|L}DA 7.199;6.748;6.6448;6.5389;6.4297;6.3377;6.1938;5.9847;5.9787;5.8867 -;-;-;-;-;-;-;-;-;- 4763 1 1.252 136650.0 1.0 7213 4739 11939 HBL1_DMSO_200M_050219_2,11954 HBL1_DMSO_200M_050219_2,11954,LTLLYHELDA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11955 64.28 281.0 394730.0 25 0 43103.0 26681 NYLRTPRTL 9 129 378.553324752228 1132.638144856884 3 378.5525085330009 MULTI CID FTMS 0 0 0 11939 159226.4375 1.0 0 0.0 16 Unmodified _NYLRTPRTL_ ENSG00000145725|ENST00000358359|PPIP5K2;ENST00000510672.1_1_5:102520366-102526739:+|nuORF;ENST00000511724.1_1_5:102509577-102524329:+|nuORF;nc|ENSG00000145725|O43314-2|PPIP5K2 12.174745833636583 0.5071271664557081 4 NY{I|L}RV 5 5 44.191 0.0 0.0 3.9016 0.0 0.0 0.0 484.24433313541255 484.24433313541255 31.091941087534245 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 NY{I|L}RV 3.9016 - 226 + 1 1.252 92863.2 1.0 7214 4739 11939 HBL1_DMSO_200M_050219_2,11955 HBL1_DMSO_200M_050219_2,11955,NYLRTPRTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11956 64.292 718.0 233360.0 25 0 16135.0 + -1 IASEKMGAMMM 11 151 632.260213780046 1262.505874626892 2 632.2617065310478 MULTI CID FTMS 0 0 0 11939 152645.578125 0.6478538291832864 -1 0.093963623046875 17 4 Oxidation (M) _IASEKM(Oxidation (M))GAM(Oxidation (M))M(Oxidation (M))M(Oxidation (M))_ REV__ENST00000376160.5_1_10:27037551-27037590:-|nuORF 16.149105407346934 0.6992268271266642 4 {I|L}A{I|L}DD{[C(Carbamidomethyl (C))E]|[WC]}[HQ]Y 10 -1 + 69.667 0.0 0.0 5.5181 5.5181 86.113 0.0 0.0 0.0 48.58453120042907 3.965724583116426 3.965724583116426 13.354089534253418 0 0.4247425010840047 2.0 0.3494850021680094 1.960409376976188 {I|L}A{I|L}DD{[C(Carbamidomethyl (C))E]|[WC]}[HQ]Y;{I|L}A{I|L}DD{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}SPP;{I|L}A{I|L}DD{[C(Carbamidomethyl (C))E]|[WC]}[EC]VP;{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}DS{I|L}PP;[{I|L}A]D{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}DS{I|L}PP;{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}DS{I|L}PP;[{I|L}A]D{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}[WE]PP;{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}[WE]PP;{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}[WE]PP;[TP]T{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}DS{I|L}PP 5.5181;4.4604;3.9092;2.853;2.7526;2.7135;1.6013;1.1426;1.0031;0.016557 -;-;-;-;-;-;-;-;-;- 600 + 1 1.252 142927.2 1.0 7215 4739 11939 HBL1_DMSO_200M_050219_2,11956 HBL1_DMSO_200M_050219_2,11956,IASEKMGAMMM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11957 64.305 733.0 202190.0 25 0 12531.0 + + 6999 RIFPNQTEEL 10 143 622.8216792857355 1243.628805638271 2 623.8255493044853 MULTI CID FTMS 0 0 0 11939 148554.375 0.4768390880981816 -8 0.8058280944824219 18 Unmodified _EEIQKNLEEL_ ENSG00000124733|ENST00000244711|MEA1 26.88365393820708 0.3646707531412818 4 [R{I|L}]{M(Oxidation (M))|F}PNQTEE 9 -1 60.901 0.0 0.0 4.897 0.0 0.0 0.0 126.06537141000253 126.06537141000253 34.41245036856159 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.8494850021680094 0.7614393726401688 [R{I|L}]{M(Oxidation (M))|F}PNQTEE 4.897 - 2785 1 1.252 112966.5 1.0 7216 4739 11939 HBL1_DMSO_200M_050219_2,11957 HBL1_DMSO_200M_050219_2,11957,EEIQKNLEEL False False RIFPNQTEEL 64.305185 623.825549304485 3145269.75 11939.0 ENSG00000124733|ENST00000244711|MEA1 7.173087279001872 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11958 64.309 115.0 583270.0 25 0 154860.0 + 12321 GSHGGDGW 8 91 386.6536950930808 771.2928372529616 2 386.6535217165947 MULTI CID FTMS 0 0 0 11939 113969.7265625 0.0350912353717853 -3 0.2865219116210937 19 Unmodified _GSHGGDGW_ REV__chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2 0.7936320650641473 0.8195151834710337 4 [MT]SV 4 -1 31.031 0.0 0.0 4.0232 0.0 0.0 0.0 350.08462127079287 350.08462127079287 14.041068762088996 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [MT]SV 4.0232 - 64 1 1.252 56867.3 1.0 7217 4739 11939 HBL1_DMSO_200M_050219_2,11958 HBL1_DMSO_200M_050219_2,11958,GSHGGDGW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11959 64.323 800.0 209330.0 25 0 12227.0 + 18993 LDHDNVKYL 9 204 558.7899485811064 1115.565344229013 2 558.7919189333916 MULTI CID FTMS 0 0 0 11939 114816.484375 0.3525424055703221 4 -0.3989486694335937 20 Unmodified _LDHDNVKYL_ ENSG00000104381|ENST00000220822|GDAP1;nc|ENSG00000104381|Q8TB36-2|GDAP1 34.40172386719151 0.1061884637610825 4 {[TV]|[{I|L}S]}MAQYKY{I|L} 9 5 + 34.013 0.0 0.0 3.0489 3.0489 63.445 0.0 0.0 0.0 1.2096975989031478 8.710981210943295 1.2096975989031478 1.2096975989031478 0 0.5579021467263782 1.154901959985743 0.4035984316004219 0.6861818737241735 {[TV]|[{I|L}S]}MAQYKY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAQYKY{I|L};[{M(Oxidation (M))|F}V]RQYKY{I|L};{[TV]|[{I|L}S]}[Q{I|L}][HN]EY{I|L};{[TV]|[{I|L}S]}ME{M(Oxidation (M))|F}[{I|L}T]Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PE{M(Oxidation (M))|F}[{I|L}T]Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[KP][{M(Oxidation (M))|F}T]Y{I|L};G[DG]TPMRRN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[MT]{M(Oxidation (M))|F}[{I|L}T]Y{I|L};[QA]P{I|L}[WP]EY{I|L} 3.0489;2.9405;2.823;2.441;2.3942;2.2858;2.2725;2.2681;2.2497;2.1856 -;-;-;-;-;-;-;-;-;- 2649 1 1.252 126788.8 0.8100000023841858 7218 4739 11939 HBL1_DMSO_200M_050219_2,11959 HBL1_DMSO_200M_050219_2,11959,LDHDNVKYL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11961 64.327 6.4 7642200.0 25 0 1522300.0 + 39124 TYGERVVAF 9 59 521.2715702786957 1040.5285876241912 2 521.2724487185478 MULTI CID FTMS 0 0 0 11960 6784381.0 0.0782242997335173 4 -0.4156265258789062 1 Unmodified _TYGERVVAF_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;ENST00000462343.1_1_2:10266966-10267371:+|nuORF;nc|ENSG00000171848|P31350-2|RRM2 20.41453444215458 0.284085796332423 4 VA{M(Oxidation (M))|F} 3 6 33.188 0.0 0.0 3.1895 0.0 0.0 705.3451542531145 0.0 705.3451542531145 0.0 19.916440611282624 0.0 0.0 0 1.0 0.0 0.0 0.0 + VA{M(Oxidation (M))|F} 3.1895 + + 57 1 1.257 42358.6 1.0 7219 4740 11960 HBL1_DMSO_200M_050219_2,11961 HBL1_DMSO_200M_050219_2,11961,TYGERVVAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11962 64.328 7.9 6819300.0 25 0 603910.0 + 39547 VAWVGQQV 8 74 443.742626364196 885.470699795192 2 443.7429687380791 MULTI CID FTMS 0 0 0 11960 7054888.5 0.7630809336104769 2 -0.2116470336914062 2 Unmodified _VAWVGQQV_ ENSG00000170540|ENST00000304414|ARL6IP1;nc|ENSG00000170540|Q15041-2|ARL6IP1 38.99230528602208 0.2511498934509823 4 {[VA]|[{I|L}G]}WVG 5 3 29.208 0.0 0.0 3.2986 0.0 0.0 0.0 370.17508146927327 370.17508146927327 6.94537812595911 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + {[VA]|[{I|L}G]}WVG 3.2986 + + 184 1 1.257 47027.5 1.0 7220 4740 11960 HBL1_DMSO_200M_050219_2,11962 HBL1_DMSO_200M_050219_2,11962,VAWVGQQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11963 64.33 8.0 7857600.0 25 0 1225800.0 + 13537 HPDSHQLFI 9 64 547.2750570028182 1092.5355610724364 2 547.2752563357353 MULTI CID FTMS 0 0 0 11960 6881326.5 0.9309810615021068 1 -0.1119308471679687 3 Unmodified _HPDSHQLFI_ ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136268294-136268516:-|nuORF 43.85829265575387 0.0542763391141878 4 PD[HS]Q{I|L}{M(Oxidation (M))|F}{I|L} 8 1 35.575 0.0 0.0 3.2562 0.0 0.0 137.0591297834 0.0 137.0591297834 0.0 23.98118275329451 0.0 0.0 0 1.1150219788552205 0.0 1.579689690656103 0.0 + PD[HS]Q{I|L}{M(Oxidation (M))|F}{I|L} 3.2562 + + 105 1 1.257 54278.7 1.0 7221 4740 11960 HBL1_DMSO_200M_050219_2,11963 HBL1_DMSO_200M_050219_2,11963,HPDSHQLFI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11964 64.331 47.0 1410400.0 25 0 406780.0 + 21093 LPAHAVII 8 78 417.26586226634265 832.5171715994853 2 417.2658569216728 MULTI CID FTMS 0 0 0 11960 1474751.5 0.9256681684632756 -1 0.0963363647460937 4 Unmodified _LPAHAVII_ ENSG00000112249|ENST00000369162|ASCC3 32.45364647766026 0.3613649037604678 4 [HA]APV{I|L}{I|L}{I|L} 8 4 + 45.355 0.0 0.0 5.4479 5.4479 73.884 0.0 0.0 0.0 5.484550065040281 29.87002527416834 5.484550065040281 2.218487496163561 0 0.5 0.0 0.0 0.0 [HA]APV{I|L}{I|L}{I|L};[HA]PAV{I|L}{I|L}{I|L};[HA]AP{I|L}V{I|L}{I|L};[HA]PA{I|L}V{I|L}{I|L};[HA]P{I|L}G{I|L}{I|L}{I|L};[HA]P{I|L}AV{I|L}{I|L};[HA]V[PA]{I|L}{I|L}{I|L};[HA]V{I|L}[PA]{I|L}{I|L} 5.4479;5.1814;5.0863;4.8198;4.6083;4.2467;3.5572;2.6225 -;-;-;-;-;-;-;- 196 1 1.257 57276.2 1.0 7222 4740 11960 HBL1_DMSO_200M_050219_2,11964 HBL1_DMSO_200M_050219_2,11964,LPAHAVII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11965 64.332 31.0 2446700.0 25 0 433010.0 + 44610 YPFKPPKI 8 78 330.5324354067559 988.5754768204677 3 330.5320617556572 MULTI CID FTMS 0 0 0 11960 1403395.25 0.1285051985537484 -14 1.325775146484375 5 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 50.111 0.0 0.0 5.069 5.069 86.924 0.0 0.0 0.0 24.70455582734944 6.623411089738568 6.623411089738568 50.11063094975712 0 0.0 1.154901959985743 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L} 5.069 + + 102 + 1 1.257 68765.1 1.0 7223 4740 11960 HBL1_DMSO_200M_050219_2,11965 HBL1_DMSO_200M_050219_2,11965,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11966 64.333 42.0 1376000.0 25 0 141020.0 + 28657 PVLLPHGYCL 10 74 556.2999846710574 1110.5854164089146 2 556.3004028201103 MULTI CID FTMS 0 0 0 11960 1060822.375 0.1300168829636802 -5 0.5432586669921875 6 Unmodified _PVLLPHGYCL_ REV__nc|ENSG00000159640|P12821-3|ACE;REV__nc|ENSG00000159640|P12821-4|ACE 18.13498045792455 0.5432546531930572 4 VP{I|L}D 4 -1 52.735 0.0 0.0 4.7484 0.0 0.0 0.0 683.3304990527333 683.3304990527333 27.81357210935475 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 VP{I|L}D 4.7484 - 65 + 1 1.257 57143.2 1.0 7224 4740 11960 HBL1_DMSO_200M_050219_2,11966 HBL1_DMSO_200M_050219_2,11966,PVLLPHGYCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11967 64.334 35.0 1228800.0 25 0 89005.0 + 2281 AQHDPLLTGV 10 84 525.7822469585667 1049.5499409839333 2 525.7825195193291 MULTI CID FTMS 0 0 0 11960 945151.5 0.7924260405631947 -2 0.1902999877929687 7 Unmodified _AQHDPLLTGV_ ENSG00000174021|ENST00000370645|GNG5;nc|ENSG00000133136|A0A804HLA8|GNG5B 15.248480904072842 0.5916873121453583 4 [{I|L}P]Y[C(Carbamidomethyl (C))K]{I|L}TGV 9 6 [{I|L}P]Y[C(Carbamidomethyl (C))K]{I|L} + + 28.188 14.103 1.8211 2.6857 2.6857 45.364 0.0 0.0 0.0 0.0 7.663507795825755 0.0 0.0 0 0.5 0.0 0.0 0.0 [{I|L}P]Y[C(Carbamidomethyl (C))K]{I|L}TGV 2.6857 - 373 + 1 1.257 39461.9 1.0 7225 4740 11960 HBL1_DMSO_200M_050219_2,11967 HBL1_DMSO_200M_050219_2,11967,AQHDPLLTGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11968 64.336 86.0 822650.0 25 0 142290.0 + 37011 TFPNGVKGL 9 80 466.7638337295896 931.5131145259792 2 466.7637206912041 MULTI CID FTMS 0 0 0 11960 703383.1875 0.9354487994867144 -5 0.5432586669921875 8 Unmodified _TFPNGVKGL_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 20.453626601364224 0.2830276176381075 4 [{M(Oxidation (M))|F}T]PNRKAV 8 4 [{M(Oxidation (M))|F}T] + + 34.602 3.7236 1.5008 3.7146 3.7146 47.796 0.0 0.0 0.0 0.0 20.18954998148708 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [{M(Oxidation (M))|F}T]PNRKAV 3.7146 - 155 + 1 1.257 63081.7 1.0 7226 4740 11960 HBL1_DMSO_200M_050219_2,11968 HBL1_DMSO_200M_050219_2,11968,TFPNGVKGL False True TFPNGVKGL 64.33635 466.763720691204 121616952.0 11960.0 ENSG00000242612|ENST00000219481|DECR2;;ENST00000439661.5_1_16:457533-461575:+|nuORF;;nc|ENSG00000242612|Q9NUI1-3|DECR2 6.69323714574178 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11969 64.338 58.0 1015600.0 25 0 117380.0 + 30890 RIPIAVSGV 9 100 456.2874593746217 910.5603658160434 2 456.2877075076103 MULTI CID FTMS 0 0 0 11960 474476.5 0.9412716935155852 2 -0.2116470336914062 9 Unmodified _RIPIAVSGV_ ENSG00000089154|ENST00000300648|GCN1 21.53697664764585 0.2571576504437394 4 [R{I|L}][{I|L}P]AVSGV 9 0 + 51.15 0.0 0.0 5.6174 5.6174 86.415 0.0 0.0 0.0 3.3893999196139646 38.68607756686472 3.3893999196139646 13.010299956639804 0 1.1307196863200843 1.0 0.0 0.0 + + [R{I|L}][{I|L}P]AVSGV;[{I|L}P][R{I|L}]AVSGV;[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VSGV;[R{I|L}][{I|L}P]A{[QD]|[EN]|[WG]|[KD]|[RS]}V;[{I|L}P][R{I|L}]A{[QD]|[EN]|[WG]|[KD]|[RS]}V;[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V 5.6174;4.1886;3.9952;2.2928;0.86396;0.67057 +;-;-;-;-;- + 75 1 1.257 52883.7 1.0 7227 4740 11960 HBL1_DMSO_200M_050219_2,11969 HBL1_DMSO_200M_050219_2,11969,RIPIAVSGV False True RIPIAVSGV 64.337798 456.28770750761 4450552.0 11960.0 ENSG00000089154|ENST00000300648|GCN1 5.921636422475179 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11970 64.34 130.0 467760.0 25 0 53831.0 + 37785 TLSEKLVEI 9 105 516.3031302166578 1030.5917075001155 2 516.3031494021416 MULTI CID FTMS 0 0 0 11960 440269.875 0.3679316208745492 2 -0.2116470336914062 10 Unmodified _TLSEKLVEI_ REV__ENSG00000082805|ENST00000360905|ERC1;REV__ENSG00000187672|ENST00000288221|ERC2;REV__ENST00000536573.6_1_12:1213918-1353789:+|nuORF;REV__ENST00000539007.5_1_12:1192665-1225250:+|nuORF;REV__nc|ENSG00000082805|Q8IUD2-2|ERC1;REV__nc|ENSG00000082805|Q8IUD2-3|ERC1;REV__nc|ENSG00000082805|Q8IUD2-4|ERC1 36.12702656103203 0.0967173616627612 4 SPV{I|L}RVE{I|L} 8 -1 38.102 0.0 0.0 3.6971 0.0 0.0 119.07420546699376 0.0 119.07420546699376 0.0 18.79419142998152 0.0 0.0 0 1.0172203223519531 0.0 0.9247425010840048 0.0 SPV{I|L}RVE{I|L} 3.6971 - 300 1 1.257 52063.7 1.0 7228 4740 11960 HBL1_DMSO_200M_050219_2,11970 HBL1_DMSO_200M_050219_2,11970,TLSEKLVEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11971 64.346 284.0 480690.0 25 0 48763.0 -1 0 142 366.7366575692964 731.4587622053928 2 366.7362548708916 MULTI CID FTMS 0 0 0 11960 296094.5 0.0053746855269536 9 -0.8465728759765625 11 4 [{I|L}V]PK{I|L}Y 6 -1 + 45.411 0.0 0.0 6.2083 6.2083 90.37 0.0 0.0 0.0 26.79174692824112 7.791681396005998 7.791681396005998 22.718202704618164 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PK{I|L}Y;[{I|L}V]G[KT][KS] 6.2083;3.1024 -;- 95 + 1 1.257 110107.5 1.0 7229 4740 11960 HBL1_DMSO_200M_050219_2,11971 HBL1_DMSO_200M_050219_2,11971, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11972 64.357 620.0 305610.0 25 0 21370.0 + 11780 GLLEKDFQKV 10 173 588.8345353487977 1175.6545177643952 2 588.8356201052666 MULTI CID FTMS 0 0 0 11960 289319.5625 1.0 0 0.0 12 Unmodified _GLLEKDFQKV_ ENSG00000176974|ENST00000316694|SHMT1;nc|ENSG00000176974|P34896-2|SHMT1;nc|ENSG00000176974|P34896-3|SHMT1;nc|ENSG00000176974|P34896-4|SHMT1 114.18643581695662 0.001143558078943 4 VA{I|L}EKD{M(Oxidation (M))|F}QVK 10 4 + 112.71 0.0 0.0 9.587 9.587 84.09 0.0 0.0 0.0 33.52182518111363 2.155998003393549 2.155998003393549 2.155998003393549 0 2.4604093769761874 1.6989700043360187 0.3252574989159953 1.4991348669726232 VA{I|L}EKD{M(Oxidation (M))|F}QVK;VA{I|L}EKD{M(Oxidation (M))|F}QKV;VA{I|L}EKD{M(Oxidation (M))|F}[AG]VK;VA{I|L}EKD{M(Oxidation (M))|F}[AG]KV;VAVS[{I|L}A]D{M(Oxidation (M))|F}QVK;VAVS[{I|L}A]D{M(Oxidation (M))|F}QKV;VA{I|L}WW{M(Oxidation (M))|F}QVK;VA{I|L}WW{M(Oxidation (M))|F}QKV;VAVS[{I|L}A]D{M(Oxidation (M))|F}[AG]VK;VAVS[{I|L}A]D{M(Oxidation (M))|F}[AG]KV 9.587;9.4036;8.8075;8.6241;7.5538;7.3704;7.1583;6.9749;6.7774;6.594 -;-;-;-;-;-;-;-;-;- 14222 + 1 1.257 140822.0 1.0 7230 4740 11960 HBL1_DMSO_200M_050219_2,11972 HBL1_DMSO_200M_050219_2,11972,GLLEKDFQKV True True GLLEKDFQKV 64.35651 588.835620105267 2201153.5 11960.0 ENSG00000176974|ENST00000316694|SHMT1;;nc|ENSG00000176974|P34896-3|SHMT1;;nc|ENSG00000176974|P34896-2|SHMT1;;nc|ENSG00000176974|P34896-4|SHMT1 6.6578240394592285 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11973 64.359 127.0 486410.0 25 0 43374.0 + 44467 YNFQDRLL 8 90 534.7753684451426 1067.536183957085 2 534.7776977419853 MULTI CID FTMS 0 0 0 11960 282679.53125 0.6281149278574463 2 -0.2116470336914062 13 Unmodified _YNFQDRLL_ REV__ENSG00000164118|ENST00000503780|CEP44;REV__nc|ENSG00000164118|Q9C0F1-2|CEP44 11.640296217721598 0.738950129755968 4 [YN]PV 4 -1 40.005 0.0 0.0 3.7474 0.0 0.0 0.0 591.2904729864146 591.2904729864146 18.57840941039747 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [YN]PV 3.7474 - 73 + 1 1.257 55281.0 1.0 7231 4740 11960 HBL1_DMSO_200M_050219_2,11973 HBL1_DMSO_200M_050219_2,11973,YNFQDRLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11974 64.371 703.0 243300.0 25 0 8471.6 + -1 GMMSTVTEV 9 126 954.4282679712132 1906.8419830092264 2 954.4285766482352 MULTI CID FTMS 0 0 0 11960 279190.375 1.0 0 0.0 14 ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PMVT{M(Oxidation (M))|F}VT[NG]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 17 -1 + 70.754 0.0 0.0 3.7105 3.7105 67.949 0.0 0.0 0.0 9.88679343829503 3.578409410397484 3.578409410397484 2.6979531151190628 0 0.0 0.0 2.0994850021680094 0.6022338482433752 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PMVT{M(Oxidation (M))|F}VT[NG]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PVMT{M(Oxidation (M))|F}VT[NG]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PMVT{M(Oxidation (M))|F}VT[NG]N{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PVMT{M(Oxidation (M))|F}VT[NG]N{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}N[NG]TV{M(Oxidation (M))|F}TMSH{[QS]|[NT]};[WR]DMT{M(Oxidation (M))|F}VT[NG]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PMTV{M(Oxidation (M))|F}VT[NG]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PMV{M(Oxidation (M))|F}TVT[NG]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PVTM{M(Oxidation (M))|F}VT[NG]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[WD]GMVT{M(Oxidation (M))|F}VT[NG]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.7105;3.569;3.5229;3.3814;3.192;3.1091;3.0817;3.0817;3.0425;3.0284 -;-;-;-;-;-;-;-;-;- 10139 1 1.257 115344.5 1.0 7232 4740 11960 HBL1_DMSO_200M_050219_2,11974 HBL1_DMSO_200M_050219_2,11974, False False GMMSTVTEV 64.371347 954.428576648235 2140679.0 11960.0 ENSG00000136813|ENST00000684092|ECPAS;;nc|ENSG00000136813|Q5VYK3|ECPAS 6.395146369934082 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11975 64.374 152.0 446930.0 25 0 39520.0 + 1539 ALKPDLVNV 9 94 484.79366999772856 967.5727870622572 2 484.7925903201103 MULTI CID FTMS 0 0 0 11960 268530.375 0.6818304409996542 2 -0.2116470336914062 15 Unmodified _ALKPDLVNV_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 29.081581746732265 0.1611639662936252 4 [{I|L}P]DKA{I|L}V{[NV]|[RG]} 9 4 + 37.853 0.0 0.0 3.9122 3.9122 66.997 0.0 0.0 0.0 15.37909996297416 3.2048902867916667 3.2048902867916667 1.7609125905568137 0 0.5 1.3979400086720375 0.0 0.0 [{I|L}P]DKA{I|L}V{[NV]|[RG]};[{I|L}P]DVK[{I|L}A]{[NV]|[RG]};[{I|L}P]DVRR{[NV]|[RG]};[{I|L}P]DRRV{[NV]|[RG]};[{I|L}P]DKV[{I|L}A]{[NV]|[RG]};[{I|L}P][VS]Q{I|L}V{[NV]|[RG]};[{I|L}P][VS]GA{I|L}V{[NV]|[RG]};[{I|L}P]A[TA]A{I|L}V{[NV]|[RG]};[DP]{I|L}KA{I|L}V{[NV]|[RG]};[DV]P{I|L}K[{I|L}A]{[NV]|[RG]} 3.9122;3.7302;3.0607;3.0607;3.0078;2.2854;2.2381;2.2381;2.1034;2.0256 -;-;-;-;-;-;-;-;-;- 690 1 1.257 57691.0 1.0 7233 4740 11960 HBL1_DMSO_200M_050219_2,11975 HBL1_DMSO_200M_050219_2,11975,ALKPDLVNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11976 64.386 685.0 234300.0 25 0 17290.0 + 40428 VIIDDHPEVTV 11 140 618.8271676019123 1235.6397822706244 2 618.8273193240166 MULTI CID FTMS 0 0 0 11960 224617.578125 0.1743242142685155 2 -0.2116470336914062 16 Unmodified _VIIDDHPEVTV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 89.40071534611396 0.0006776708238028 4 V{I|L}{I|L}DDH{NN|[MP]|[D{I|L}]|[EV]}PTV 11 2 + 85.192 0.0 0.0 6.8946 6.8946 75.523 0.0 0.0 0.0 36.57577319177793 10.211892990699384 10.211892990699384 0.1722032235195314 0 1.2302046884880935 2.0 1.3441876774005248 0.0 V{I|L}{I|L}DDH{NN|[MP]|[D{I|L}]|[EV]}PTV;V{I|L}{I|L}DDH[EP]VTV;V{I|L}{I|L}[Y{M(Oxidation (M))|F}]G{NN|[MP]|[D{I|L}]|[EV]}PTV;V{I|L}{I|L}[Y{M(Oxidation (M))|F}]G[EP]VTV;V{I|L}{I|L}DDH{NN|[MP]|[D{I|L}]|[EV]}PS{I|L};V{I|L}{I|L}DDH[EP]VS{I|L};V{I|L}{I|L}DDH{NN|[MP]|[D{I|L}]|[EV]}TPV;V{I|L}{I|L}[Y{M(Oxidation (M))|F}]G{NN|[MP]|[D{I|L}]|[EV]}PS{I|L};V{I|L}{I|L}[Y{M(Oxidation (M))|F}]G[EP]VS{I|L};V{I|L}{I|L}D[H{I|L}]DDPTV 6.8946;6.8807;6.4161;6.4022;6.0682;6.0542;5.8164;5.5897;5.5758;5.5193 -;+;-;-;-;-;-;-;-;- + 3261 + 1 1.257 121269.1 1.0 7234 4740 11960 HBL1_DMSO_200M_050219_2,11976 HBL1_DMSO_200M_050219_2,11976,VIIDDHPEVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11977 64.4 800.0 279670.0 25 0 20778.0 + 13475 HLTPLAPCP 9 188 474.7530850485215 947.491617163843 2 475.7581054568291 MULTI CID FTMS 0 0 0 11960 201431.578125 0.7819261897476224 -3 0.3358879089355469 17 Unmodified _HLTPLAPCP_ REV__ENST00000505145.1_1_5:177034264-177036693:+|nuORF 16.942295170755138 0.3780752226737986 4 YP{I|L}PHV 6 -1 30.099 0.0 0.0 3.1767 0.0 0.0 223.1016314473016 0.0 223.1016314473016 0.0 7.359757273404909 0.0 0.0 0 0.0 0.0 0.0 0.0 YP{I|L}PHV 3.1767 - 460 + 1 1.257 170589.6 0.949999988079071 7235 4740 11960 HBL1_DMSO_200M_050219_2,11977 HBL1_DMSO_200M_050219_2,11977,HLTPLAPCP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11978 64.415 763.0 196120.0 25 0 11133.0 + -1 QNPNFSCCEQ 10 170 642.2436788326048 1282.4728047320095 2 642.2451049685478 MULTI CID FTMS 0 0 0 11960 150622.609375 1.0 0 0.0 18 2 Carbamidomethyl (C) _QNPNFSC(Carbamidomethyl (C))C(Carbamidomethyl (C))EQ_ REV__ENST00000465304.5_1_3:122313378-122329447:+|nuORF 3.5964929083625545 0.7100006075494749 4 {[QN]|[E{I|L}]|[KN]}T 3 -1 13.916 0.0 0.0 1.0851 0.0 0.0 0.0 936.3000639313838 936.3000639313838 0.2712075774578686 0.0 0.0 0.0 0 0.0 0.5086383061657274 0.0 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}T 1.0851 - 454 1 1.257 112352.3 1.0 7236 4740 11960 HBL1_DMSO_200M_050219_2,11978 HBL1_DMSO_200M_050219_2,11978,QNPNFSCCEQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11979 64.429 800.0 161910.0 25 0 18193.0 -1 0 115 1026.452308934226 2050.890064935252 2 1026.958422839642 MULTI CID FTMS 0 0 0 11960 141144.796875 1.0 0 0.0 19 4 TYAQD 5 -1 14.178 0.0 0.0 0.69131 0.0 0.0 1155.5504786088834 314.0814303033813 1469.6319089122646 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.2742275032520141 TYAQD 0.69131 - 1306 + 1 1.257 96197.8 0.8700000047683716 7237 4740 11960 HBL1_DMSO_200M_050219_2,11979 HBL1_DMSO_200M_050219_2,11979, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11980 64.435 343.0 432790.0 25 0 43043.0 25091 MPWYQRRI 8 120 383.87104558885255 1148.5913073667575 3 383.8705932497978 MULTI CID FTMS 0 0 0 11960 128478.0703125 0.1912118262190578 -6 0.6323394775390625 20 Unmodified _MPWYQRRI_ ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1;nc|ENSG00000176623|Q96DB5-3|RMDN1 26.34127834903884 0.4900704351052977 4 MPWA 4 5 33.999 0.0 0.0 2.96 0.0 0.0 0.0 660.3480318658811 660.3480318658811 22.16358505790958 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 MPWA 2.96 - 182 + 1 1.257 127996.3 1.0 7238 4740 11960 HBL1_DMSO_200M_050219_2,11980 HBL1_DMSO_200M_050219_2,11980,MPWYQRRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11982 64.439 2.7 16704000.0 25 0 2070200.0 + 26286 NQTPVTLQV 9 77 500.2772532570952 998.5399535809904 2 500.2776061892509 MULTI CID FTMS 0 0 0 11981 19103220.0 0.9408428767642508 1 -0.0997161865234375 1 Unmodified _NQTPVTLQV_ ENSG00000063244|ENST00000308924|U2AF2;nc|ENSG00000063244|P26368-2|U2AF2 52.268347100219714 0.0353964759249114 4 {[QN]|[E{I|L}]|[KN]}T[VP]T 6 3 40.964 0.0 0.0 4.1024 0.0 0.0 0.0 355.1988030285092 355.1988030285092 20.80845872593846 0.0 0.0 0.0 0 0.0 1.154901959985743 1.16944517631652 0.6549471895720984 + {[QN]|[E{I|L}]|[KN]}T[VP]T 4.1024 + + 207 1 1.261 37856.0 1.0 7239 4741 11981 HBL1_DMSO_200M_050219_2,11982 HBL1_DMSO_200M_050219_2,11982,NQTPVTLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11983 64.44 13.0 3823800.0 25 0 375820.0 19690 LGLRPLHQL 9 79 349.5540861262841 1045.6404289790523 3 349.5538513064384 MULTI CID FTMS 0 0 0 11981 3124083.25 0.2546990892793537 3 -0.3036956787109375 2 Unmodified _LGLRPLHQL_ ENST00000318430.9_1_17:76134666-76137438:+|nuORF 30.22481116460888 0.1466181017706357 4 {[VA]|[{I|L}G]}{I|L}E 4 6 41.867 0.0 0.0 4.0039 0.0 0.0 0.0 630.3865098969505 630.3865098969505 27.174165578762484 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}{I|L}E 4.0039 - 54 + 1 1.261 47655.3 1.0 7240 4741 11981 HBL1_DMSO_200M_050219_2,11983 HBL1_DMSO_200M_050219_2,11983,LGLRPLHQL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11984 64.442 13.0 4077100.0 25 0 421140.0 + 255 ADAPIVAHL 9 70 453.7558059840875 905.497059034975 2 453.7559997439384 MULTI CID FTMS 0 0 0 11981 4258017.5 1.0 0 0.0 3 Unmodified _ADAPIVAHL_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 49.66892048692302 0.0410958345688192 4 {[DA]|[EG]}AP{I|L}VAH{I|L} 9 0 + 68.37 0.0 0.0 7.5505 7.5505 88.105 0.0 0.0 0.0 37.91238483632647 7.931825014007217 7.931825014007217 6.989700043360188 0 0.8807196863200843 1.3979400086720375 0.0 0.0 + + {[DA]|[EG]}AP{I|L}VAH{I|L};{[DA]|[EG]}A{I|L}PVAH{I|L} 7.5505;6.7786 +;- + 175 + 1 1.261 45740.4 1.0 7241 4741 11981 HBL1_DMSO_200M_050219_2,11984 HBL1_DMSO_200M_050219_2,11984,ADAPIVAHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11985 64.443 16.0 2358600.0 25 0 271980.0 + -1 TVWMCSGSI 9 67 528.7276745207663 1055.4407961083325 2 528.7277709841728 MULTI CID FTMS 0 0 0 11981 2732682.5 0.0389376220628958 -4 0.4478187561035156 4 Carbamidomethyl (C),Oxidation (M) _TVWM(Oxidation (M))C(Carbamidomethyl (C))SGSI_ REV__ENST00000530342.2_1_11:67007518-67007740:+|nuORF 21.74664581756881 0.2544899275067181 4 TGNVS{I|L} 6 -1 34.826 0.0 0.0 3.2996 0.0 0.0 466.13426406074376 0.0 466.13426406074376 0.0 19.341153291726982 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.4247425010840047 TGNVS{I|L} 3.2996 - 44 1 1.261 37164.5 1.0 7242 4741 11981 HBL1_DMSO_200M_050219_2,11985 HBL1_DMSO_200M_050219_2,11985,TVWMCSGSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11986 64.444 24.0 2088500.0 25 0 127160.0 38223 TPRSPGLFSV 10 77 530.7910346489405 1059.5675163646808 2 530.7929565310478 MULTI CID FTMS 0 0 0 11981 1390319.375 0.7953385418901254 -1 0.1119308471679687 5 Unmodified _TPRSPGLFSV_ ENSG00000134762|ENST00000360428|DSC3;nc|ENSG00000134762|Q14574-2|DSC3 17.11289562659939 0.5604042439455784 4 TPW{I|L} 4 7 56.186 0.0 0.0 5.3027 0.0 0.0 0.0 559.2843340229864 559.2843340229864 34.39001916450927 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 TPW{I|L} 5.3027 - 70 + 1 1.261 48923.8 1.0 7243 4741 11981 HBL1_DMSO_200M_050219_2,11986 HBL1_DMSO_200M_050219_2,11986,TPRSPGLFSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11987 64.445 62.0 817260.0 25 0 44154.0 + -1 FPFVFECCV 9 98 574.2492828454451 1146.4840127576902 2 574.2498046755791 MULTI CID FTMS 0 0 0 11981 973080.875 1.0 0 0.0 6 Carbamidomethyl (C) _FPFVFEC(Carbamidomethyl (C))CV_ REV__ENSG00000159063|ENST00000299626|ALG8 12.531546534597751 0.4974689918368763 4 PS{I|L}YTV 6 -1 53.709 0.0 0.0 4.6847 0.0 0.0 468.13655289616514 0.0 468.13655289616514 0.0 31.04548165299996 0.0 0.0 0 1.1989700043360187 0.0 0.9604093769761876 0.0 PS{I|L}YTV 4.6847 - 437 + 1 1.261 48402.5 1.0 7244 4741 11981 HBL1_DMSO_200M_050219_2,11987 HBL1_DMSO_200M_050219_2,11987,FPFVFECCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11988 64.447 77.0 1199400.0 25 0 115030.0 + 1941 AMKVPLSL 8 97 429.7594294671788 857.5043060011576 2 429.7596313357353 MULTI CID FTMS 0 0 0 11981 931046.75 0.1608474542158445 -3 0.3022308349609375 7 Unmodified _AMKVPLSL_ REV__ENST00000480436.5_1_20:13415759-13610725:-|nuORF;REV__nc|ENSG00000089123|Q9H6P5-3|TASP1 24.67388899826682 0.525179942228231 4 {[DS]|[MA]|[CV]|TT}P 3 -1 32.319 0.0 0.0 3.769 0.0 0.0 0.0 555.3515719049436 555.3515719049436 9.30400924012389 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}P 3.769 - 132 + 1 1.261 74541.2 1.0 7245 4741 11981 HBL1_DMSO_200M_050219_2,11988 HBL1_DMSO_200M_050219_2,11988,AMKVPLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11989 64.448 32.0 1135900.0 25 0 57564.0 29648 QNFSVSLNI 9 69 511.2693906317742 1020.5242283303484 2 511.2684509158134 MULTI CID FTMS 0 0 0 11981 908880.6875 0.4411682919995228 -6 0.6551895141601562 8 Unmodified _QNFSVSLNI_ ENST00000486271.5_1_3:112732082-112732223:-|nuORF 19.256988751693697 0.3154191944385105 4 TT[HS] 4 8 25.445 0.0 0.0 2.4934 0.0 0.0 576.3397694318375 0.0 576.3397694318375 0.0 14.02532931189798 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 TT[HS] 2.4934 - 103 1 1.261 33501.4 1.0 7246 4741 11981 HBL1_DMSO_200M_050219_2,11989 HBL1_DMSO_200M_050219_2,11989,QNFSVSLNI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11990 64.45 49.0 893520.0 25 0 128100.0 11846 GLRRILDD 8 80 479.27739840107984 956.5402438689596 2 479.2776367068291 MULTI CID FTMS 0 0 0 11981 774354.125 0.4569418268237468 -6 0.6551895141601562 9 Unmodified _GLRRILDD_ CON__Q14532;CON__Q497I4;CON__Q92764;ENSG00000108759|ENST00000225899|KRT32;ENSG00000197079|ENST00000246639|KRT35 5.760428011301431 0.7893668129297577 4 {I|L} 1 7 9.6041 0.0 0.0 1.004 0.0 0.0 825.4453169664191 0.0 825.4453169664191 0.0 0.4554023467366619 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.004 + + 11 + 1 1.261 41395.5 1.0 7247 4741 11981 HBL1_DMSO_200M_050219_2,11990 HBL1_DMSO_200M_050219_2,11990,GLRRILDD False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 11991 64.451 43.0 904510.0 25 0 67555.0 + 35730 SVHKGFAFV 9 76 496.2720479643877 0 496.2719299197197 PEAK CID FTMS 0 0 0 11981 751805.9375 0.15436314464275 3 -0.3036956787109375 10 Unmodified _SVHKGFAFV_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 30.63653989081413 0.1077493867305487 4 HD 2 8 10.503 0.0 0.0 1.0604 0.0 0.0 667.3697967570972 68.05140863590077 735.421205392998 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3252574989159953 0.0 HD 1.0604 - 41 + 1 1.261 35309.2 1.0 7248 4741 11981 HBL1_DMSO_200M_050219_2,11991 HBL1_DMSO_200M_050219_2,11991,SVHKGFAFV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11992 64.454 129.0 335300.0 25 0 32116.0 -1 0 55 964.4447607727724 2890.312452918517 3 964.7813598513604 MULTI CID FTMS 0 0 0 11981 597232.4375 0.7118289849851515 -2 0.2082672119140625 11 4 N 1 -1 9.6041 0.0 0.0 0.33229 0.0 0.0 2191.0256620023047 582.2198580377561 2773.245520040061 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 N 0.33229 - 22 + 1 1.261 41177.8 1.0 7249 4741 11981 HBL1_DMSO_200M_050219_2,11992 HBL1_DMSO_200M_050219_2,11992, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 11993 64.458 256.0 550430.0 25 0 90333.0 20194 LLAKGGGI 8 117 364.73697166786025 727.4593904025205 2 364.7368957400322 MULTI CID FTMS 0 0 0 11981 378584.8125 0.9590207830211552 -1 0.1119308471679687 12 Unmodified _LLAKGGGI_ ENSG00000163482|ENST00000295709|STK36;nc|ENSG00000163482|Q9NRP7-2|STK36 6.354104778181461 0.7857632046190106 4 EV{I|L}{I|L}VR 6 8 + 61.178 0.0 0.0 8.4098 8.4098 83.168 0.0 0.0 0.0 30.801981352645807 2.2847932851536967 2.2847932851536967 2.2847932851536967 0 0.2887254899964357 1.6989700043360187 0.0 0.3054621874040891 EV{I|L}{I|L}VR;EV{I|L}{I|L}RV;EV{I|L}VR{I|L};EV{I|L}V{I|L}R;EVV{I|L}R{I|L};EVV{I|L}{I|L}R 8.4098;8.0957;7.7956;7.334;7.1397;6.6781 -;-;-;-;-;- 92 + 1 1.261 115952.9 1.0 7250 4741 11981 HBL1_DMSO_200M_050219_2,11993 HBL1_DMSO_200M_050219_2,11993,LLAKGGGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11994 64.469 590.0 279180.0 25 0 38904.0 + -1 FINECDTIAS 10 170 585.2623376437894 1168.5101223543786 2 585.2628051638603 MULTI CID FTMS 0 0 0 11981 294978.71875 1.0 0 0.0 13 Carbamidomethyl (C) _FINEC(Carbamidomethyl (C))DTIAS_ REV__ENST00000467418.1_1_6:170058029-170062491:-|nuORF 26.268140514670165 0.3785003716575977 4 {I|L}A{I|L}S{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 7 -1 25.952 0.0 0.0 2.2209 0.0 0.0 394.0629444806656 0.0 394.0629444806656 0.0 1.6733949149947804 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 {I|L}A{I|L}S{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 2.2209 - 2811 1 1.261 125165.9 1.0 7251 4741 11981 HBL1_DMSO_200M_050219_2,11994 HBL1_DMSO_200M_050219_2,11994,FINECDTIAS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 11995 64.48 628.0 212870.0 25 0 12224.0 -1 PLSPKKCPTL 10 168 570.8279630547713 1139.6413731763423 2 570.8289062380791 MULTI CID FTMS 0 0 0 11981 257400.234375 0.3978000616056352 4 -0.383819580078125 14 Carbamidomethyl (C) _PLSPKKC(Carbamidomethyl (C))PTL_ ENST00000209875.8_1_12:54633972-54634116:-|nuORF 34.40172386719151 0.2166836008404837 4 [{I|L}P]S[KG][WR]PS{I|L} 10 -1 + 49.86 0.0 0.0 4.3751 4.3751 65.814 0.0 0.0 0.0 0.3330585050319712 8.26606256887672 0.3330585050319712 0.3330585050319712 0 1.329689690656103 1.5228787452803376 1.325257498915995 0.0 [{I|L}P]S[KG][WR]PS{I|L};[PS]{I|L}[KG][WR]PS{I|L};[{I|L}P]SP{I|L}SEVVS{I|L};[PS]{I|L}P{I|L}SEVVS{I|L};[{I|L}P]SP{I|L}SE{I|L}[TA]{I|L};[PS]{I|L}P{I|L}SE{I|L}[TA]{I|L};{[QN]|[E{I|L}]|[KN]}D[{I|L}V][RV]PS{I|L};{[TV]|[{I|L}S]}P[KG][WR]PS{I|L};{[TV]|[{I|L}S]}PP{I|L}SEVVS{I|L};{NN|[MP]|[D{I|L}]|[EV]}E[{I|L}V][RV]PS{I|L} 4.3751;4.3459;4.2084;4.1792;3.7944;3.7651;3.2384;3.0485;2.8818;2.8557 -;-;-;-;-;-;-;-;-;- 3853 1 1.261 104512.3 1.0 7252 4741 11981 HBL1_DMSO_200M_050219_2,11995 HBL1_DMSO_200M_050219_2,11995,PLSPKKCPTL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 11996 64.492 709.0 320970.0 25 0 20860.0 + 41407 VPLDGRPMNI 10 191 564.2973087569122 1126.5800645806244 2 564.2971069216728 MULTI CID FTMS 0 0 0 11981 190653.53125 0.3172827375343186 -3 0.3022308349609375 15 Oxidation (M) _VPLDGRPM(Oxidation (M))NI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 47.594388314883695 0.0942698883389255 4 VP{I|L}DNV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]P 9 5 69.936 0.0 0.0 6.2078 0.0 0.0 0.0 82.06692682437733 82.06692682437733 37.99730664963016 0.0 0.0 0.0 0 1.7267847641652956 1.5228787452803376 0.25 0.3054621874040891 VP{I|L}DNV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]P 6.2078 - 2567 + 1 1.261 176892.9 1.0 7253 4741 11981 HBL1_DMSO_200M_050219_2,11996 HBL1_DMSO_200M_050219_2,11996,VPLDGRPMNI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11997 64.498 335.0 449970.0 25 0 49166.0 5847 DPVIKRLLA 9 143 342.2217308819127 1023.6433632459382 3 342.2208129763603 MULTI CID FTMS 0 0 0 11981 170386.46875 0.4527103167828977 1 -0.0997161865234375 16 Unmodified _DPVIKRLLA_ ENSG00000186645|ENST00000671986|SPDYE17;ENSG00000262461|ENST00000575125|SPDYE9;ENSG00000273520|ENST00000333385|SPDYE8;nc|ENSG00000184616|P0DUX1|SPDYE12;nc|ENSG00000286014|P0DUD4|SPDYE15 4.5288652416199255 0.7565837746943351 4 VPDAK{I|L} 6 6 44.455 0.0 0.0 4.3428 0.0 0.0 0.0 397.25698694528296 397.25698694528296 18.79281604097812 0.0 0.0 0.0 0 0.1803115997617927 0.0 0.0 0.0 VPDAK{I|L} 4.3428 - 104 + 1 1.261 124179.7 1.0 7254 4741 11981 HBL1_DMSO_200M_050219_2,11997 HBL1_DMSO_200M_050219_2,11997,DPVIKRLLA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11998 64.504 342.0 278830.0 25 0 26123.0 -1 VAAKRGMK 8 122 438.75906445132847 875.503575969457 2 438.7574340701103 MULTI CID FTMS 0 0 0 11981 171639.953125 1.0 0 0.0 17 Oxidation (M) _VAAKRGM(Oxidation (M))K_ ENSG00000162944|ENST00000295049|RFTN2 6.354104778181461 0.7857632046190106 4 [{I|L}V][QP]MP 6 -1 28.958 0.0 0.0 3.3075 0.0 0.0 0.0 207.11399255924064 207.11399255924064 15.312346841520746 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V][QP]MP 3.3075 - 189 + 1 1.261 76739.5 1.0 7255 4741 11981 HBL1_DMSO_200M_050219_2,11998 HBL1_DMSO_200M_050219_2,11998,VAAKRGMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 11999 64.519 800.0 195860.0 25 0 8133.6 -1 0 144 909.9306993511784 1817.8468457691563 2 910.4319946169852 MULTI CID FTMS 0 0 0 11981 147066.859375 0.6731305162240242 -1 0.1119308471679687 18 4 [MN]PN{I|L}NADQ[VP]DY{I|L}SQ 16 -1 + 102.36 0.0 0.0 5.6308 5.6308 81.228 0.0 0.0 0.0 79.97815151962777 4.467232003605247 4.467232003605247 6.709412807357751 0 1.3684151806525389 1.5228787452803376 0.8633643341304673 1.5565533887547016 [MN]PN{I|L}NADQ[VP]DY{I|L}SQ;[MN]PN{I|L}NWQ[VP]DY{I|L}SQ;[MN]PN{I|L}GGADQ[VP]DY{I|L}SQ;[MN]PN{I|L}NAD[AG][VP]DY{I|L}SQ;[MN]PGG{I|L}NADQ[VP]DY{I|L}SQ;[MN]PN{I|L}NAEN[VP]DY{I|L}SQ;[NP]{I|L}NAD[VP]QDAN{I|L}[DP][EP];[MN]PN{I|L}NW[AG][VP]DY{I|L}SQ;[MN]PGG{I|L}NWQ[VP]DY{I|L}SQ;[MN]PN{I|L}GGWQ[VP]DY{I|L}SQ 5.6308;5.2618;5.135;5.135;5.135;5.0489;4.7837;4.765;4.765;4.765 -;-;-;-;-;-;-;-;-;- 6377 + 1 1.261 107878.5 0.949999988079071 7256 4741 11981 HBL1_DMSO_200M_050219_2,11999 HBL1_DMSO_200M_050219_2,11999, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12000 64.521 61.0 889460.0 25 0 109880.0 + -1 SVLRAMVAF 9 78 505.2767917760186 1008.5390306188372 2 505.2771179080009 MULTI CID FTMS 0 0 0 11981 140871.90625 0.0079279181091526 10 -0.956329345703125 19 Oxidation (M) _SVLRAM(Oxidation (M))VAF_ REV__SVA_D_dup1331|chr19:38854971-38856692:-|1.2988722813039473|0.199855440521665|2.7|47.0|25|3|sense 14.838274106304384 0.4350285940865338 4 {I|L}PQ{I|L}QKV 7 -1 24.571 0.0 0.0 2.4363 0.0 0.0 184.0268368705935 0.0 184.0268368705935 0.0 5.185883070070467 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {I|L}PQ{I|L}QKV 2.4363 - 180 + 1 1.261 45783.1 1.0 7257 4741 11981 HBL1_DMSO_200M_050219_2,12000 HBL1_DMSO_200M_050219_2,12000,SVLRAMVAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12001 64.535 800.0 237230.0 25 0 16041.0 + + 34220 SLPPHLSGI 9 183 460.2651408082716 918.5157286833432 2 460.7636901736259 MULTI CID FTMS 0 0 0 11981 128630.96875 0.2985846106796206 17 -1.5899887084960938 20 Unmodified _SLPKNFTL_ nc|ENSG00000163728|Q96N46-2|TTC14;nc|ENSG00000163728|Q96N46-3|TTC14;ENSG00000163728|ENST00000296015|TTC14 14.581692164780916 0.6954967302934248 4 {[TV]|[{I|L}S]}M{I|L}SGRR 8 -1 + 30.977 0.0 0.0 3.3725 3.3725 63.087 0.0 0.0 0.0 8.558988239509972 4.059998299700055 4.059998299700055 0.5122257169791524 0 0.0 2.0 0.1803115997617927 0.0 {[TV]|[{I|L}S]}M{I|L}SGRR;{[TV]|[{I|L}S]}MKERR;{[TV]|[{I|L}S]}M{I|L}SRGR;{[TV]|[{I|L}S]}P[SG]{M(Oxidation (M))|F}RR;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}{M(Oxidation (M))|F}RR;[AG]V[DV]{M(Oxidation (M))|F}RR;[{M(Oxidation (M))|F}V]{[RE]|[WV]}GRR;[KA]PP[H{I|L}]SG{I|L};[{M(Oxidation (M))|F}V][TP]SGRR;[KA]PP[H{I|L}]GS{I|L} 3.3725;3.3167;2.8056;2.0557;1.7144;1.1128;1.0494;0.97955;0.90004;0.85025 -;-;-;-;-;-;-;-;-;- 810 1 1.261 146578.1 0.8100000023841858 7258 4741 11981 HBL1_DMSO_200M_050219_2,12001 HBL1_DMSO_200M_050219_2,12001,SLPKNFTL False False SLPPHLSGI 64.534511 460.763690173626 16119537.0 11981.0 nc|ENSG00000163728|Q96N46-2|TTC14;;nc|ENSG00000163728|Q96N46-3|TTC14;;ENSG00000163728|ENST00000296015|TTC14 4.4788548946380615 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12003 64.539 18.0 3099800.0 25 0 335400.0 + + 21390 LPYSPRVL 8 66 472.7824971831464 943.5504414330928 2 472.7823364138603 MULTI CID FTMS 0 0 0 12002 2295938.0 0.794251072103582 1 -0.0909652709960937 1 Unmodified _LPFVLWGL_ ENSG00000188603|ENST00000636147|CLN3;nc|ENSG00000261832|Q13286-3|CLN3;nc|ENSG00000261832|Q13286-4|CLN3;ENST00000566083.6_2_16:28493835-28503080:-|nuORF;nc|ENSG00000261832|Q13286-7|CLN3;ENST00000564574.5_2_16:28493646-28503072:-|nuORF;nc|ENSG00000261832|Q13286-2|CLN3;nc|ENSG00000261832|Q13286-5|CLN3 17.086550045450526 0.6584923310065985 4 {I|L}PYS 4 -1 52.18 0.0 0.0 5.5302 0.0 0.0 0.0 480.2947118897336 480.2947118897336 24.388793896675267 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {I|L}PYS 5.5302 - 48 + 1 1.261 50861.9 1.0 7259 4742 12002 HBL1_DMSO_200M_050219_2,12003 HBL1_DMSO_200M_050219_2,12003,LPFVLWGL False False LPYSPRVL 64.53889 472.78233641386 24509652.0 12002.0 ENSG00000188603|ENST00000636147|CLN3;;nc|ENSG00000261832|Q13286-3|CLN3;;nc|ENSG00000261832|Q13286-4|CLN3;;ENST00000566083.6_2_16:28493835-28503080:-|nuORF;;nc|ENSG00000261832|Q13286-7|CLN3;;ENST00000564574.5_2_16:28493646-28503072:-|nuORF;;nc|ENSG00000261832|Q13286-2|CLN3;;nc|ENSG00000261832|Q13286-5|CLN3 2.9052388668060303 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12004 64.54 34.0 1513800.0 25 0 190570.0 + 35779 SVIPQIQKV 9 87 506.3137288240521 1010.6129047149044 2 506.3136474490166 MULTI CID FTMS 0 0 0 12002 1209075.0 0.3151106513172906 3 -0.2841033935546875 2 Unmodified _SVIPQIQKV_ ENSG00000151876|ENST00000281623|FBXO4;nc|ENSG00000151876|Q9UKT5-2|FBXO4 52.268347100219714 0.0353964759249114 4 [VS]{I|L}PQ{I|L}QKV 9 0 + 63.709 0.0 0.0 6.304 6.304 86.808 0.0 0.0 0.0 35.29223280046342 11.27121139309525 11.27121139309525 9.208187539523747 0 0.9247425010840048 1.6989700043360187 0.0 0.2302046884880938 + + [VS]{I|L}PQ{I|L}QKV;[VS]{I|L}PQ{I|L}[AG]KV;[VS]{I|L}P[AG]{I|L}QKV;[VS]{I|L}P[AG]{I|L}[AG]KV 6.304;5.3928;5.3928;4.486 +;-;-;- + 244 + 1 1.261 47289.4 1.0 7260 4742 12002 HBL1_DMSO_200M_050219_2,12004 HBL1_DMSO_200M_050219_2,12004,SVIPQIQKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12005 64.541 19.0 3938500.0 25 0 393620.0 37353 TKHSILTLK 9 84 520.8266498655075 1039.638746797815 2 520.8278686404228 MULTI CID FTMS 0 0 0 12002 2039097.0 0.1585708646623558 -3 0.3079833984375 3 Unmodified _TKHSILTLK_ ENST00000415794.1_1_3:139212742-139212994:+|nuORF 24.99096001346401 0.2132109383330889 4 T{I|L} 2 7 21.013 0.0 0.0 2.0212 0.0 0.0 259.1878906704015 563.2961259688393 822.4840166392407 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3494850021680094 0.0 + T{I|L} 2.0212 + + 111 + 1 1.261 63182.7 1.0 7261 4742 12002 HBL1_DMSO_200M_050219_2,12005 HBL1_DMSO_200M_050219_2,12005,TKHSILTLK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12006 64.542 38.0 1073900.0 25 0 111230.0 + 7355 KVLGEAMTGI 10 90 508.78524710371744 1015.5559412742348 2 509.7844421267509 MULTI CID FTMS 0 0 0 12002 768779.3125 0.2073730165190081 6 -0.5759124755859375 4 Unmodified _EGAKVIATDI_ nc|ENSG00000137076|Q9Y490-2|TLN1;ENSG00000137076|ENST00000314888|TLN1 13.042465956692816 0.6287021003332052 4 K{[QN]|[E{I|L}]|[KN]}N{I|L}ETG{I|L} 9 6 + 32.017 0.0 0.0 3.1527 3.1527 63.241 0.0 0.0 0.0 8.829628067253175 9.77723605288848 8.829628067253175 0.924778212679488 0 0.3935078169319297 0.0 0.0 0.0 K{[QN]|[E{I|L}]|[KN]}N{I|L}ETG{I|L};K[QT]PVHHG{I|L};K{[QN]|[E{I|L}]|[KN]}N{I|L}ETAV;K[QT]PVHHAV 3.1527;3.0616;2.1899;2.0989 -;-;-;- 195 + 1 1.261 40310.1 1.0 7262 4742 12002 HBL1_DMSO_200M_050219_2,12006 HBL1_DMSO_200M_050219_2,12006,EGAKVIATDI False False KVLGEAMTGI 64.542425 509.784442126751 7867159.5 12002.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 3.1932690938313804 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12007 64.544 68.0 800870.0 25 0 62791.0 + 9824 FPDPNVKYV 9 84 539.7824019990643 1077.5502510649285 2 539.7824584841728 MULTI CID FTMS 0 0 0 12002 751324.0 0.2169977017838342 5 -0.4593658447265625 5 Unmodified _FPDPNVKYV_ ENSG00000158773|ENST00000368021|USF1;ENST00000491629.5_1_1:161011414-161013065:-|nuORF;ENST00000529476.1_1_1:161011414-161013065:-|nuORF 31.26834338654808 0.1333407332142048 4 [DP]NVP{M(Oxidation (M))|F}KYV 9 4 + 48.079 0.0 0.0 4.4619 4.4619 78.759 0.0 0.0 0.0 15.423785981398764 6.792712525424804 6.792712525424804 9.191293077419758 0 0.9204841662593096 1.3010299956639813 0.0 0.0 [DP]NVP{M(Oxidation (M))|F}KYV;[DP]{M(Oxidation (M))|F}[NP]VKYV;[DP]GGVP{M(Oxidation (M))|F}KYV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[NP]VKYV;YYVP{M(Oxidation (M))|F}KYV;[NP]VDP{M(Oxidation (M))|F}KYV;[DP]N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VKYV;[NP]DVP{M(Oxidation (M))|F}KYV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YYVKYV;[DP]GG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VKYV 4.4619;3.6089;3.6073;3.0305;2.6533;2.5323;2.4962;2.3264;1.9653;1.6417 -;-;-;+;-;-;-;-;-;- + 169 1 1.261 50882.0 1.0 7263 4742 12002 HBL1_DMSO_200M_050219_2,12007 HBL1_DMSO_200M_050219_2,12007,FPDPNVKYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12008 64.545 47.0 1075600.0 25 0 109750.0 + 44617 YPFKPPKI 8 62 495.2945804491195 988.574607965039 2 495.2951537966728 MULTI CID FTMS 0 0 0 12002 680457.6875 0.1476962216392869 -12 1.202301025390625 6 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 36.04419817259434 0.3004715606373109 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 68.301 0.0 0.0 6.909 6.909 93.355 0.0 0.0 0.0 51.64565071227592 9.80835659879972 9.80835659879972 26.00833760139686 0 0.4247425010840047 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 6.909;4.2782 +;- + 74 + 1 1.261 43407.7 1.0 7264 4742 12002 HBL1_DMSO_200M_050219_2,12008 HBL1_DMSO_200M_050219_2,12008,YPFKPPKI False True YPFKPPKI 64.545321 495.295153796673 3749646064.0 12002.0 ENSG00000072401|ENST00000373910|UBE2D1;;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;;nc|ENSG00000185651|P68036-3|UBE2L3;;nc|ENSG00000185651|P68036-2|UBE2L3;;ENSG00000185651|ENST00000342192|UBE2L3 6.41327174504598 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12009 64.548 109.0 379180.0 25 0 43214.0 + -1 EGLVCMWELGL 11 76 633.2962857380936 1264.5780185429871 2 633.2969848513603 MULTI CID FTMS 0 0 0 12002 658943.75 0.2212492820955942 -2 0.2116470336914062 7 Oxidation (M) _EGLVCM(Oxidation (M))WELGL_ REV__ENST00000396593.6_2_16:8962046-8962115:-|nuORF 8.745405648335112 0.8338865417133445 4 {[QS]|[NT]}AD{[WS]|[C(Carbamidomethyl (C)){I|L}]}[CS]V{I|L}{[VA]|[{I|L}G]} 12 -1 + 29.12 0.0 0.0 2.3028 2.3028 72.233 0.0 0.0 0.0 1.901596699261603 7.949171771974761 1.901596699261603 8.45098040014257 0 0.5 0.0 0.6549471895720985 0.0 {[QS]|[NT]}AD{[WS]|[C(Carbamidomethyl (C)){I|L}]}[CS]V{I|L}{[VA]|[{I|L}G]};{[QS]|[NT]}AD[NS]{[{M(Oxidation (M))|F}D]|MM}V{I|L}{[VA]|[{I|L}G]};{[QS]|[NT]}AD{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}[YQ][PA] 2.3028;1.6345;0.94984 -;-;- 149 1 1.261 43980.0 1.0 7265 4742 12002 HBL1_DMSO_200M_050219_2,12009 HBL1_DMSO_200M_050219_2,12009,EGLVCMWELGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12010 64.549 43.0 1247700.0 25 0 167670.0 + 45817 YYPAKIEAI 9 74 534.2924860459532 1066.5704191587065 2 534.2922241091728 MULTI CID FTMS 0 0 0 12002 604760.8125 0.5419644122373332 -1 0.0997161865234375 8 Unmodified _YYPAKIEAI_ ENSG00000129292|ENST00000395386|PHF20L1;ENST00000361997.9_1_8:133790074-133829825:+|nuORF;ENST00000395383.5_1_8:133790074-133836319:+|nuORF;nc|ENSG00000129292|A8MW92-2|PHF20L1;nc|ENSG00000129292|A8MW92-4|PHF20L1 19.256988751693697 0.3154191944385105 4 [{I|L}V][QT]PAM{I|L} 8 8 35.411 0.0 0.0 3.3201 0.0 0.0 0.0 210.08540874294377 210.08540874294377 -8.228918517273627 0.0 -8.228918517273627 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 [{I|L}V][QT]PAM{I|L} 3.3201 - 114 1 1.261 48472.1 1.0 7266 4742 12002 HBL1_DMSO_200M_050219_2,12010 HBL1_DMSO_200M_050219_2,12010,YYPAKIEAI False True YYPAKIEAI 64.548865 534.292224109173 9461282.0 12002.0 ENST00000361997.9_1_8:133790074-133829825:+|nuORF;;nc|ENSG00000129292|A8MW92-4|PHF20L1;;ENST00000395383.5_1_8:133790074-133836319:+|nuORF;;ENSG00000129292|ENST00000395386|PHF20L1;;nc|ENSG00000129292|A8MW92-2|PHF20L1 5.473027070363362 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12011 64.551 96.0 667860.0 25 0 96232.0 31280 RLWPSPGV 8 99 456.2566666684605 910.4987804037212 2 456.2571288943291 MULTI CID FTMS 0 0 0 12002 466653.1875 0.2403084400714483 -5 0.5475349426269531 9 Unmodified _RLWPSPGV_ ENST00000375820.8_1_13:110804785-110807666:-|nuORF 5.230669730166228 0.792582437072536 4 Q 1 8 10.713 0.0 0.0 1.1766 0.0 0.0 764.4294424904383 0.0 764.4294424904383 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 1.1766 - 17 + 1 1.261 54945.6 1.0 7267 4742 12002 HBL1_DMSO_200M_050219_2,12011 HBL1_DMSO_200M_050219_2,12011,RLWPSPGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12012 64.553 111.0 484980.0 25 0 28274.0 + 27082 PEYNLPRSL 9 97 544.7894064442501 1087.5642599553 2 544.7882568240166 MULTI CID FTMS 0 0 0 12002 388327.96875 0.0855104319397105 8 -0.7447128295898438 10 Unmodified _PEYNLPRSL_ REV__ENSG00000137804|ENST00000559596|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-2|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-3|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-4|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-5|NUSAP1;REV__nc|ENSG00000137804|Q9BXS6-6|NUSAP1 21.74664581756881 0.2544899275067181 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}A 4 -1 29.107 0.0 0.0 2.6764 0.0 0.0 0.0 672.3090469028187 672.3090469028187 9.706705862189448 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.7134679910804405 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}A 2.6764 - 239 1 1.261 48281.0 1.0 7268 4742 12002 HBL1_DMSO_200M_050219_2,12012 HBL1_DMSO_200M_050219_2,12012,PEYNLPRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12013 64.563 541.0 388290.0 25 0 39352.0 + 4200 DAPKAGQLEAW 11 163 593.2982890591308 1184.5820251850614 2 593.2988159060478 MULTI CID FTMS 0 0 0 12002 365905.875 0.2343787006411041 -2 0.2116470336914062 11 Unmodified _DAPKAGQLEAW_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 49.74193281347159 0.1190592179673825 4 K{I|L}EADAW 7 8 76.538 0.0 0.0 6.4612 0.0 0.0 353.18199355293126 0.0 353.18199355293126 0.0 31.97741110234868 0.0 0.0 0 0.9247425010840048 0.0 0.8516784832448856 1.4802046884880935 K{I|L}EADAW 6.4612 - 11783 1 1.261 156564.2 1.0 7269 4742 12002 HBL1_DMSO_200M_050219_2,12013 HBL1_DMSO_200M_050219_2,12013,DAPKAGQLEAW True True DAPKAGQLEAW 64.562805 593.298815906048 25557830.0 12002.0 nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4 5.252780119578044 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12014 64.575 679.0 206780.0 25 0 10754.0 -1 0 140 946.4338755915334 1890.8531982498664 2 946.9354125857352 MULTI CID FTMS 0 0 0 12002 283367.21875 0.4296568299022072 2 -0.2039794921875 12 4 [YG]{I|L}S{I|L}[C(Carbamidomethyl (C))K]EQEN{I|L}DP[EP] 16 -1 + 64.054 0.0 0.0 3.3875 3.3875 63.987 0.0 0.0 0.0 7.764662139152463 7.659167939666318 7.659167939666318 0.9691001300805624 0 0.3807196863200844 1.0457574905606752 0.6861818737241735 0.2887254899964357 [YG]{I|L}S{I|L}[C(Carbamidomethyl (C))K]EQEN{I|L}DP[EP];[YG]{I|L}S{I|L}[C(Carbamidomethyl (C))K]QEEN{I|L}DP[EP];[YG]{I|L}S{I|L}G[KC]EQEN{I|L}DP[EP];[YG]{I|L}SG{I|L}[KC]EQEN{I|L}DP[EP];[YG]{I|L}S{I|L}G[KC]QEEN{I|L}DP[EP];[YG]{I|L}SG{I|L}[KC]QEEN{I|L}DP[EP];[YG]{I|L}S{[CA]|SS}AREQEN{I|L}DP[EP];[YG]{I|L}S{[CA]|SS}ARQEEN{I|L}DP[EP];[YG]{I|L}SGS[QA]{M(Oxidation (M))|F}APEN{I|L}DP[EP];[YG]{I|L}{I|L}S[C(Carbamidomethyl (C))K]EQEN{I|L}DP[EP] 3.3875;3.3363;3.3317;3.3047;3.2805;3.2534;3.1045;3.0532;3.0274;2.9969 -;-;-;-;-;-;-;-;-;- 13716 1 1.261 93131.7 1.0 7270 4742 12002 HBL1_DMSO_200M_050219_2,12014 HBL1_DMSO_200M_050219_2,12014, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12015 64.579 234.0 243510.0 25 0 23114.0 + -1 TIGMSGLWVR 10 89 568.2990882343107 1134.583623535421 2 568.3001586794853 MULTI CID FTMS 0 0 0 12002 283482.53125 0.0242854211629946 9 -0.8566131591796875 13 Oxidation (M) _TIGM(Oxidation (M))SGLWVR_ REV__ENST00000508125.1_1_5:122737108-122737255:-|nuORF 10.823927491677226 0.6659270209832991 4 [VP]SR{M(Oxidation (M))|F}{I|L}T 7 -1 26.222 0.0 0.0 2.3111 0.0 0.0 0.0 331.14903089838987 331.14903089838987 11.04435549375982 0.0 0.0 0.0 0 0.0 0.6575773191777937 0.4247425010840047 0.3494850021680094 [VP]SR{M(Oxidation (M))|F}{I|L}T 2.3111 - 190 1 1.261 49721.9 1.0 7271 4742 12002 HBL1_DMSO_200M_050219_2,12015 HBL1_DMSO_200M_050219_2,12015,TIGMSGLWVR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12016 64.583 190.0 383450.0 25 0 43274.0 + 7764 ELFPLNKL 8 123 487.28968303235695 972.564813131514 2 487.7910339236259 MULTI CID FTMS 0 0 0 -1 0 14 Unmodified _ELFPLNKL_ REV__ENSG00000155034|ENST00000382368|FBXL18;REV__nc|ENSG00000155034|Q96ME1-1|FBXL18;REV__nc|ENSG00000155034|Q96ME1-2|FBXL18;REV__nc|ENSG00000155034|Q96ME1-5|FBXL18 9.347437153973935 0.7675937258251505 4 {I|L} 1 -1 13.495 0.0 0.0 1.3876 0.0 0.0 841.4696268295593 0.0 841.4696268295593 0.0 3.817139967814685 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3876 + + 52 + 1 1.261 59557.4 1.0 7272 4742 12002 HBL1_DMSO_200M_050219_2,12016 HBL1_DMSO_200M_050219_2,12016,ELFPLNKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12017 64.594 649.0 214110.0 25 0 17497.0 + 32082 RVLPPSALQSV 11 152 583.8482282329863 1165.6819035327726 2 583.8483154177666 MULTI CID FTMS 0 0 0 12002 246798.578125 0.4367643426668727 20 -1.9197311401367188 15 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 74.7717668357584 0.0185759530880285 4 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 80.788 0.0 0.0 6.9305 6.9305 88.131 0.0 0.0 0.0 11.569749686086084 56.06453417553105 11.569749686086084 9.128498242810991 0 1.836696871556164 0.721246399047171 0.9247425010840048 0.0 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[{I|L}P][RV][PS]A{I|L}QSV;[RV][TP][VP]A{I|L}QSV;{[TV]|[{I|L}S]}[RP][VP]A{I|L}QSV;[RV]{I|L}P[PS]RRW;[PS][R{I|L}][VP]A{I|L}QSV 6.9305;6.1474;4.9283;4.1999;3.6022;3.5503;2.8431 +;-;-;-;-;-;- + 726 1 1.261 106971.2 1.0 7273 4742 12002 HBL1_DMSO_200M_050219_2,12017 HBL1_DMSO_200M_050219_2,12017,RVLPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12018 64.609 800.0 173670.0 25 0 28549.0 -1 0 74 1146.4765898498272 3436.407940149682 3 1147.144457995892 MULTI CID FTMS 0 0 0 12002 207730.421875 0.7095200564510129 -1 0.0997161865234375 16 4 YE{I|L}D 4 -1 9.897 0.0 0.0 0.288 0.0 0.0 2307.928278139719 605.2584932916624 2913.1867714313817 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YE{I|L}D 0.288 - 299 + 1 1.261 109930.1 0.8999999761581421 7274 4742 12002 HBL1_DMSO_200M_050219_2,12018 HBL1_DMSO_200M_050219_2,12018, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12019 64.612 132.0 546400.0 25 0 43031.0 27555 PLAFVPVLI 9 94 484.8113776202274 967.6082023072548 2 484.8132507205009 MULTI CID FTMS 0 0 0 12002 168811.6875 1.0 0 0.0 17 Unmodified _PLAFVPVLI_ ENST00000450820.2_1_1:25580287-25594290:-|nuORF 45.7499826716795 0.0496882803020414 4 [{I|L}P]AS[KQ]V{I|L}{I|L} 9 3 + 50.16 0.0 0.0 5.184 5.184 71.875 0.0 0.0 0.0 4.7544062799326525 20.45847949733385 4.7544062799326525 1.7609125905568137 0 1.110924374808178 2.0 0.0 0.0 [{I|L}P]AS[KQ]V{I|L}{I|L};[{I|L}P]ASV[KQ]{I|L}{I|L};[{I|L}P]GT[KQ]V{I|L}{I|L};[{I|L}P]GTV[KQ]{I|L}{I|L};[{I|L}P]KE[KQ]{I|L}{I|L};[PA]S{I|L}[KQ]V{I|L}{I|L};{I|L}AA{I|L}V{I|L}RNV;[PA]S{I|L}V[KQ]{I|L}{I|L};[{I|L}P]ASV{[VA]|[{I|L}G]}[KA]{I|L};{I|L}AA{I|L}V[RN]V{I|L} 5.184;5.002;4.7699;4.5879;3.8711;3.8361;3.7391;3.6541;3.6391;3.6304 -;-;-;-;-;-;-;-;-;- 858 1 1.261 59055.4 1.0 7275 4742 12002 HBL1_DMSO_200M_050219_2,12019 HBL1_DMSO_200M_050219_2,12019,PLAFVPVLI True False TGPLVLNRV 64.611735 484.813250720501 1876846.0 12002.0 ENST00000456481.1_1_7:137407104-137407545:+|nuORF;;ENST00000489915.1_1_18:6462145-6462637:-|nuORF;;ENSG00000089009|ENST00000202773|RPL6;;ENST00000553205.1_1_12:112843569-112844143:-|nuORF 3.954349994659424 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12020 64.626 800.0 101500.0 25 0 31488.0 -1 0 53 1185.4822243504611 3553.424843651584 3 1186.150073230267 MULTI CID FTMS 0 0 0 12002 135345.546875 0.0710447341312021 4 -0.3614120483398437 18 4 WADKW 5 -1 17.423 0.0 0.0 0.49031 0.0 0.0 2385.860845936993 478.2413729303344 2864.102218867328 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WADKW 0.49031 - 172 + 1 1.261 65948.0 0.6800000071525574 7276 4742 12002 HBL1_DMSO_200M_050219_2,12020 HBL1_DMSO_200M_050219_2,12020, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12022 64.63 2.2 21971000.0 25 0 2731200.0 + 24850 MPLSTIREV 9 53 523.2887915949585 1044.563030256717 2 523.2900878787041 MULTI CID FTMS 0 0 0 12021 23366982.0 0.7178313348502819 1 -0.1130142211914062 1 Unmodified _MPLSTIREV_ ENSG00000105810|ENST00000424848|CDK6 26.268140514670165 0.1969607489560049 4 MP{I|L}ST 5 4 61.682 0.0 0.0 5.9051 0.0 0.0 0.0 512.2855318658811 512.2855318658811 35.74031267727719 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.0 0.0 + MP{I|L}ST 5.9051 + + 31 + 1 1.257 43418.3 1.0 7277 4743 12021 HBL1_DMSO_200M_050219_2,12022 HBL1_DMSO_200M_050219_2,12022,MPLSTIREV False True MPLSTIREV 64.629862 523.290087878704 262883280.0 12021.0 ENSG00000105810|ENST00000424848|CDK6 2.8107190132141118 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12023 64.631 8.5 6273400.0 25 0 688770.0 + 41402 VPLDGRPMNI 10 66 556.2999846710574 1110.5854164089146 2 556.3003417849541 MULTI CID FTMS 0 0 0 12021 6476926.0 0.7938272698164169 -2 0.1906814575195312 2 Unmodified _VPLDGRPMNI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 26.268140514670165 0.3785003716575977 4 VP{I|L}D 4 6 56.542 0.0 0.0 5.0912 0.0 0.0 0.0 683.3310907475678 683.3310907475678 27.501225267834 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3807196863200844 0.0 + VP{I|L}D 5.0912 + + 54 + 1 1.257 52818.7 1.0 7278 4743 12021 HBL1_DMSO_200M_050219_2,12023 HBL1_DMSO_200M_050219_2,12023,VPLDGRPMNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12024 64.632 21.0 2479800.0 25 0 782470.0 + 12322 GSHGGDGW 8 68 386.6536950930808 771.2928372529616 2 386.6537963747978 MULTI CID FTMS 0 0 0 12021 2685296.25 0.8268016919391957 1 -0.1130142211914062 3 Unmodified _GSHGGDGW_ REV__chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2 0.7936320650641473 0.8195151834710337 4 [MT]SV 4 -1 30.15 0.0 0.0 3.9091 0.0 0.0 0.0 350.0844992004804 350.0844992004804 13.027646714607355 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [MT]SV 3.9091 - 46 1 1.257 48681.8 1.0 7279 4743 12021 HBL1_DMSO_200M_050219_2,12024 HBL1_DMSO_200M_050219_2,12024,GSHGGDGW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12025 64.633 26.0 2976800.0 25 0 563050.0 + 44611 YPFKPPKI 8 71 330.5324354067559 988.5754768204677 3 330.5320312380791 MULTI CID FTMS 0 0 0 12021 2241402.75 0.2052393332724105 -11 1.1102409362792969 4 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 28.486842064014134 0.4448922141344407 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 50.206 0.0 0.0 5.0787 5.0787 83.625 0.0 0.0 0.0 15.59213444718182 5.617884338781352 5.617884338781352 11.708187539523747 0 0.25 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 5.0787;3.8943 +;- + 187 + 1 1.257 69439.5 1.0 7280 4743 12021 HBL1_DMSO_200M_050219_2,12025 HBL1_DMSO_200M_050219_2,12025,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12026 64.635 38.0 1542500.0 25 0 202180.0 + 13538 HPDSHQLFI 9 73 547.2750570028182 1092.5355610724364 2 547.2749511599541 MULTI CID FTMS 0 0 0 12021 1444876.375 0.195478668442315 4 -0.3684005737304687 5 Unmodified _HPDSHQLFI_ ENSG00000145907|ENST00000356245|G3BP1;ENST00000413279.1_1_2:136268294-136268516:-|nuORF 39.94969957227396 0.0757326808254658 4 SQ{I|L}{M(Oxidation (M))|F}{I|L} 5 4 48.092 0.0 0.0 4.4018 0.0 0.0 486.18293959785314 0.0 486.18293959785314 0.0 39.675390846596486 0.0 0.0 0 0.6861818737241735 0.0 1.079689690656103 0.0 SQ{I|L}{M(Oxidation (M))|F}{I|L} 4.4018 - 128 1 1.257 52649.4 1.0 7281 4743 12021 HBL1_DMSO_200M_050219_2,12026 HBL1_DMSO_200M_050219_2,12026,HPDSHQLFI True True HPDSHQLFI 64.634577 547.274951159954 242318904.0 12021.0 ENSG00000145907|ENST00000356245|G3BP1;;ENST00000413279.1_1_2:136268294-136268516:-|nuORF 5.673260847727458 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12027 64.636 82.0 761040.0 25 0 120590.0 + 37012 TFPNGVKGL 9 93 466.7638337295896 931.5131145259792 2 466.7640869021416 MULTI CID FTMS 0 0 0 12021 748796.1875 0.9958448070769444 -2 0.1906814575195312 6 Unmodified _TFPNGVKGL_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 14.838274106304384 0.4350285940865338 4 NPET 4 8 21.995 0.0 0.0 2.3612 0.0 0.0 472.3014925120629 0.0 472.3014925120629 0.0 3.056715293754092 0.0 0.0 0 0.5796896906561032 0.0 0.0 0.0 NPET 2.3612 - 101 1 1.257 53004.4 1.0 7282 4743 12021 HBL1_DMSO_200M_050219_2,12027 HBL1_DMSO_200M_050219_2,12027,TFPNGVKGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12028 64.638 85.0 640850.0 25 0 101010.0 + 12599 GVIPAEKIDGV 11 72 549.3134650408178 1096.6123771484356 2 549.3138305544853 MULTI CID FTMS 0 0 0 12021 633566.0625 0.937901412747116 1 -0.1130142211914062 7 Unmodified _GVIPAEKIDGV_ ENSG00000163918|ENST00000296273|RFC4;ENST00000479307.5_1_3:186508099-186512490:-|nuORF 23.78978130925829 0.5336113198261219 4 [PA]EK{I|L}DR 7 5 37.936 0.0 0.0 3.4594 0.0 0.0 0.0 284.1618515959544 284.1618515959544 7.737190586435354 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.4247425010840047 0.0 [PA]EK{I|L}DR 3.4594 - 115 1 1.257 48185.2 1.0 7283 4743 12021 HBL1_DMSO_200M_050219_2,12028 HBL1_DMSO_200M_050219_2,12028,GVIPAEKIDGV False True GVIPAEKIDGV 64.638348 549.3144 5668733.5 12021.0 ENSG00000163918|ENST00000296273|RFC4;;ENST00000479307.5_1_3:186508099-186512490:-|nuORF 6.076929251352946 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12029 64.642 202.0 428520.0 25 0 106240.0 + 21094 LPAHAVII 8 98 417.26586226634265 832.5171715994853 2 417.2657043337822 MULTI CID FTMS 0 0 0 12021 450391.46875 0.2827005403753087 2 -0.1931381225585937 8 Unmodified _LPAHAVII_ ENSG00000112249|ENST00000369162|ASCC3 32.45364647766026 0.3613649037604678 4 [HA]PAV{I|L}{I|L}{I|L} 8 4 + 42.612 0.0 0.0 5.1185 5.1185 73.966 0.0 0.0 0.0 5.484550065040281 31.353240441719485 5.484550065040281 3.0102999566398125 0 0.9247425010840048 0.0 0.0 0.0 [HA]PAV{I|L}{I|L}{I|L};[HA]PA{I|L}V{I|L}{I|L};[HA]APV{I|L}{I|L}{I|L};[HA]P{I|L}G{I|L}{I|L}{I|L};[HA]AP{I|L}V{I|L}{I|L};[HA]P{I|L}AV{I|L}{I|L};[HA]VAP{I|L}{I|L}{I|L};[HA]AVP{I|L}{I|L}{I|L};[HA]V{I|L}[PA]{I|L}{I|L};[{I|L}V][HA][PA]{I|L}{I|L} 5.1185;4.7569;4.5454;4.1838;4.1838;3.8222;3.5917;3.4606;1.7707;0.322 -;-;-;-;-;-;-;-;-;- 297 1 1.257 70435.9 1.0 7284 4743 12021 HBL1_DMSO_200M_050219_2,12029 HBL1_DMSO_200M_050219_2,12029,LPAHAVII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12030 64.646 208.0 498260.0 25 0 89825.0 + 43853 YFIRDVKSL 9 100 380.8851689383362 1139.6336774152087 3 380.8849059939384 MULTI CID FTMS 0 0 0 12021 332745.46875 0.8302297408280314 -1 0.0909652709960937 9 Unmodified _YFIRDVKSL_ ENSG00000113318|ENST00000265081|MSH3 18.721224879955976 0.3299216912490967 4 S{M(Oxidation (M))|F}KHKS{I|L} 7 5 39.016 0.0 0.0 3.4236 0.0 0.0 294.1562929565864 0.0 294.1562929565864 0.0 12.818204259575978 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 S{M(Oxidation (M))|F}KHKS{I|L} 3.4236 - 310 + 1 1.257 85472.8 1.0 7285 4743 12021 HBL1_DMSO_200M_050219_2,12030 HBL1_DMSO_200M_050219_2,12030,YFIRDVKSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12031 64.65 212.0 445300.0 25 0 40022.0 + 5918 DPYSQQIRL 9 121 560.2926384049472 1118.5707238766945 2 560.2921020388603 MULTI CID FTMS 0 0 0 12021 227770.421875 0.4979596960723261 2 -0.1931381225585937 10 Unmodified _DPYSQQIRL_ ENSG00000143493|ENST00000366994|INTS7;nc|ENSG00000143493|Q9NVH2-2|INTS7;nc|ENSG00000143493|Q9NVH2-3|INTS7;nc|ENSG00000143493|Q9NVH2-4|INTS7 62.57269311338072 0.0246576765497938 4 [DP]YSQQ{I|L}R{I|L} 9 0 + 80.868 0.0 0.0 7.2296 7.2296 90.036 0.0 0.0 0.0 68.87805265390023 9.27067703229376 9.27067703229376 9.208187539523747 0 1.274227503252014 1.6989700043360187 0.4247425010840047 0.5891368308784531 + + [DP]YSQQ{I|L}R{I|L};[DP]YSQ[AG]{I|L}R{I|L};[DP]YS[AG]Q{I|L}R{I|L};[DP]YS[AG][AG]{I|L}R{I|L};[DP]Y{I|L}DD{I|L}R{I|L};[DP]YSQ[KA][TP]{I|L};[DP]Y{I|L}[DV]ER{I|L};[DP]Y{I|L}[NG][Q{I|L}]TV;[DP]Y{I|L}[NG][Q{I|L}]S{I|L};[DP]Y{I|L}[DV][W{I|L}]V 7.2296;6.4064;6.4064;5.587;5.2997;4.9992;4.7614;3.3525;3.3172;3.0771 +;-;-;-;-;-;-;-;-;- + 390 + 1 1.257 75223.4 1.0 7286 4743 12021 HBL1_DMSO_200M_050219_2,12031 HBL1_DMSO_200M_050219_2,12031,DPYSQQIRL True True DPYSQQIRL 64.650162 560.29210203886 3642977.5 12021.0 nc|ENSG00000143493|Q9NVH2-4|INTS7;;ENSG00000143493|ENST00000366994|INTS7;;nc|ENSG00000143493|Q9NVH2-3|INTS7;;nc|ENSG00000143493|Q9NVH2-2|INTS7 6.7476348876953125 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12032 64.664 800.0 321630.0 25 0 29555.0 -1 0 232 366.7366575692964 731.4587622053928 2 366.7367431521416 MULTI CID FTMS 0 0 0 12021 222098.640625 0.0040315181447925 12 -1.1871719360351562 11 4 [{I|L}V]PKY{I|L} 6 -1 + 41.889 0.0 0.0 5.7268 5.7268 73.591 0.0 0.0 0.0 11.483259264971151 1.484198324578223 1.484198324578223 1.484198324578223 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]PKY{I|L};[{I|L}V]PK{I|L}Y;[KP]{I|L}Y{I|L}V;[{I|L}P]KY{I|L}V;[K{I|L}]PY{I|L}V 5.7268;5.5239;1.5995;0.51615;0.31414 -;-;-;-;- 136 + 1 1.257 199399.6 0.9200000166893004 7287 4743 12021 HBL1_DMSO_200M_050219_2,12032 HBL1_DMSO_200M_050219_2,12032, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12033 64.676 716.0 160760.0 25 0 10552.0 + 18418 KVVENLQDDF 10 141 603.8039724318179 0 603.8036987185478 PEAK CID FTMS 0 0 0 12021 199217.953125 0.6116472787295953 1 -0.1130142211914062 12 Unmodified _KVVENLQDDF_ ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3 49.52724829834842 0.051481045030324 4 DDQ{I|L}NE 6 9 50.653 0.0 0.0 4.2015 0.0 0.0 165.07825655917674 323.2096041315063 488.28786069068303 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.5994850021680094 1.2614393726401687 DDQ{I|L}NE 4.2015 - 260 + 1 1.257 85778.4 1.0 7288 4743 12021 HBL1_DMSO_200M_050219_2,12033 HBL1_DMSO_200M_050219_2,12033,KVVENLQDDF True True KVVENLQDDF 64.676402 603.803698718548 3423075.0 12021.0 ENSG00000168610|ENST00000264657|STAT3;;nc|ENSG00000168610|P40763-2|STAT3;;nc|ENSG00000168610|P40763-3|STAT3 7.742029349009196 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12034 64.682 321.0 250950.0 25 0 33552.0 + 27917 PLTDPPLV 8 133 426.2459724390974 850.4773919449948 2 426.2457153201103 MULTI CID FTMS 0 0 0 12021 172268.5 0.67491045572193 -1 0.0909652709960937 13 Unmodified _PLTDPPLV_ REV__ENSG00000152990|ENST00000334304|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-2|ADGRA3 5.760428011301431 0.7893668129297577 4 {I|L} 1 -1 11.109 0.0 0.0 1.3062 0.0 0.0 719.3823887485089 0.0 719.3823887485089 0.0 0.9281828848095586 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3062 + + 29 + 1 1.257 67050.8 1.0 7289 4743 12021 HBL1_DMSO_200M_050219_2,12034 HBL1_DMSO_200M_050219_2,12034,PLTDPPLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12035 64.696 800.0 244880.0 25 0 23798.0 + 29710 QPIYKRNL 8 222 516.3031302166578 1030.5917075001155 2 516.3038818240166 MULTI CID FTMS 0 0 0 12021 147295.25 0.1230940001961795 5 -0.4849472045898437 14 Unmodified _QPIYKRNL_ REV__ENST00000442354.1_1_9:44052481-44067763:-|nuORF 38.15118350030904 0.2652218139009398 4 [QP]Q 3 -1 27.464 0.0 0.0 2.6649 0.0 0.0 0.0 674.4006441705686 674.4006441705686 3.380333129179266 0.0 0.0 0.0 0 0.1694451763165201 1.3010299956639813 0.0 0.2302046884880938 [QP]Q 2.6649 - 2234 + 1 1.257 149932.1 0.949999988079071 7290 4743 12021 HBL1_DMSO_200M_050219_2,12035 HBL1_DMSO_200M_050219_2,12035,QPIYKRNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12036 64.711 800.0 118980.0 25 0 36797.0 + -1 LICCLRQNMIT 11 78 711.3580200076103 0 711.3580200076103 PEAK CID FTMS 0 0 0 -1 0 15 2 Carbamidomethyl (C) _LIC(Carbamidomethyl (C))C(Carbamidomethyl (C))LRQNMIT_ REV__ENSG00000182974|ENST00000332663|OR4M2B;REV__ENSG00000274102|ENST00000614722|OR4M2 8.745405648335112 0.4618489994582195 4 V 1 -1 5.4846 0.0 0.0 0.38605 0.0 0.0 1135.56847424198 183.0417421930297 1318.6102164350095 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.38605 - 10 + 1 1.257 75345.9 0.8600000143051147 7291 4743 12021 HBL1_DMSO_200M_050219_2,12036 HBL1_DMSO_200M_050219_2,12036,LICCLRQNMIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12037 64.725 800.0 231290.0 25 0 19746.0 -1 0 120 867.3998639227552 1732.7851749123104 2 867.4003784060478 MULTI CID FTMS 0 0 0 12021 99169.765625 0.2888017788420235 -2 0.1906814575195312 16 4 NMPD{I|L}NAQVMDNM{I|L}Q 15 -1 + 108.45 0.0 0.0 6.2585 6.2585 57.679 0.0 0.0 0.0 26.020599913279625 11.9181547698838 11.9181547698838 0.0 0 1.2222964765208266 1.6989700043360187 0.6861818737241735 1.1382104921644451 NMPD{I|L}NAQVMDNM{I|L}Q;NMPD{I|L}NAKVMDNM{I|L}Q;NMPD{I|L}NAKVMQ[EC]{I|L}Q;NMPD{I|L}NAQVMQ[EC]{I|L}Q;NMPD{I|L}NA[AG]VMDNM{I|L}Q;NMPD{I|L}GGAQVMDNM{I|L}Q;NMPD{I|L}GGAKVMDNM{I|L}Q;NMPD{I|L}NAKVMW{[WT]|[RM]}Q;NMPD{I|L}NAQVMW{[WT]|[RM]}Q;NMPD{I|L}NAKVM[AG][EC]{I|L}Q 6.2585;6.2585;6.1028;6.1028;5.7373;5.7373;5.7373;5.6067;5.6067;5.5816 -;-;-;-;-;-;-;-;-;- 11455 + 1 1.257 124615.5 0.8999999761581421 7292 4743 12021 HBL1_DMSO_200M_050219_2,12037 HBL1_DMSO_200M_050219_2,12037, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12038 64.739 800.0 165310.0 25 0 13132.0 + -1 IPYSSQGHLQI 11 158 622.2946829124769 0 621.8276244997978 PEAK CID FTMS 0 0 0 12021 38849.5390625 1.0 0 0.0 17 Carbamidomethyl (C),Oxidation (M) _VGC(Carbamidomethyl (C))SFAFM(Oxidation (M))LPV_ ENSG00000088854|ENST00000252032|DNAAF9 10.823927491677226 0.4426539792967427 4 E{I|L}DVD 5 -1 18.659 0.0 0.0 1.5016 0.0 0.0 244.0804414091349 424.2198885553344 668.3003299644694 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 E{I|L}DVD 1.5016 - 591 + 1 1.257 105295.8 0.9800000190734864 7293 4743 12021 HBL1_DMSO_200M_050219_2,12038 HBL1_DMSO_200M_050219_2,12038,VGCSFAFMLPV False False IPYSSQGHLQI 64.738756 621.827624499798 1026446.0625 12021.0 ENSG00000088854|ENST00000252032|DNAAF9 2.722527503967285 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12040 64.743 1.0 32238000.0 25 0 3771900.0 -1 SICMCSVSL 9 62 528.7276745207663 1055.4407961083325 2 528.7283813357353 MULTI CID FTMS 0 0 0 12039 56776236.0 0.8089968810945954 -1 0.1130142211914062 1 2 Carbamidomethyl (C) _SIC(Carbamidomethyl (C))MC(Carbamidomethyl (C))SVSL_ ENST00000325722.7_1_1:35899174-35899423:-|nuORF 26.88365393820708 0.1891292719743517 4 TGNVS{I|L} 6 -1 50.878 0.0 0.0 4.8206 0.0 0.0 466.13377577949376 0.0 466.13377577949376 0.0 33.888662832205014 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.0 TGNVS{I|L} 4.8206 - 47 1 1.257 34805.8 1.0 7294 4744 12039 HBL1_DMSO_200M_050219_2,12040 HBL1_DMSO_200M_050219_2,12040,SICMCSVSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12041 64.744 18.0 1929700.0 25 0 200710.0 + 26287 NQTPVTLQV 9 81 500.2772532570952 998.5399535809904 2 500.2773620486259 MULTI CID FTMS 0 0 0 12039 1853819.375 0.0913015059124223 4 -0.3719329833984375 2 Unmodified _NQTPVTLQV_ ENSG00000063244|ENST00000308924|U2AF2;nc|ENSG00000063244|P26368-2|U2AF2 32.30548876998284 0.1201446275138228 4 {[QN]|[E{I|L}]|[KN]}T 3 6 29.22 0.0 0.0 2.9263 0.0 0.0 0.0 652.3666191906185 652.3666191906185 17.30922475067892 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.5752574989159953 + {[QN]|[E{I|L}]|[KN]}T 2.9263 + + 33 1 1.257 32986.9 1.0 7295 4744 12039 HBL1_DMSO_200M_050219_2,12041 HBL1_DMSO_200M_050219_2,12041,NQTPVTLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12042 64.745 11.0 4454000.0 25 0 482240.0 24216 MAKIPVSL 8 71 429.7594294671788 857.5043060011576 2 429.7596008181572 MULTI CID FTMS 0 0 0 12039 5788383.5 1.0 0 0.0 3 Unmodified _MAKIPVSL_ ENSG00000126705|ENST00000673934|AHDC1 19.438996006549623 0.6237395211498085 4 [KP]V{I|L}S 5 5 19.208 0.0 0.0 2.24 0.0 0.0 0.0 330.14613606442293 330.14613606442293 5.114393726401687 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [KP]V{I|L}S 2.24 - 49 1 1.257 49079.6 1.0 7296 4744 12039 HBL1_DMSO_200M_050219_2,12042 HBL1_DMSO_200M_050219_2,12042,MAKIPVSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12043 64.746 41.0 1024700.0 25 0 192450.0 37769 TLRSPRLD 8 75 479.27739840107984 956.5402438689596 2 479.2776977419853 MULTI CID FTMS 0 0 0 12039 1276445.875 0.7532232232431588 -3 0.3036956787109375 4 Unmodified _TLRSPRLD_ ENSG00000167123|ENST00000372838|CERCAM;nc|ENSG00000167123|Q5T4B2-2|CERCAM 0.7936320650641473 0.8195151834710337 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.257 38710.4 1.0 7297 4744 12039 HBL1_DMSO_200M_050219_2,12043 HBL1_DMSO_200M_050219_2,12043,TLRSPRLD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12044 64.748 89.0 798500.0 25 0 69495.0 + 2282 AQHDPLLTGV 10 115 525.7822469585667 1049.5499409839333 2 525.7833740115166 MULTI CID FTMS 0 0 0 12039 1069500.375 0.8966815875995562 2 -0.1574325561523437 5 Unmodified _AQHDPLLTGV_ ENSG00000174021|ENST00000370645|GNG5;nc|ENSG00000133136|A0A804HLA8|GNG5B 32.037481411007896 0.2488723560272515 4 [QA]HDP{I|L}{I|L}TR 9 2 + 56.024 0.0 0.0 5.3379 5.3379 84.102 0.0 0.0 0.0 8.724603071667147 38.74394806943914 8.724603071667147 9.86667939723769 0 0.5 0.0 0.3494850021680094 0.5467716608392861 [QA]HDP{I|L}{I|L}TR;{[QN]|[E{I|L}]|[KN]}[YG]GAA{I|L}TR;[HD][QA]P{I|L}{I|L}TR;[{I|L}P]DHGAA{I|L}TR;[QA]HDP{I|L}T{I|L}R;{[QN]|[E{I|L}]|[KN]}[YN]AA{I|L}TR;{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]P{I|L}{I|L}TR;[{I|L}P]DH[QA]{I|L}TR;{[QN]|[E{I|L}]|[KN]}[YG][QA]{I|L}TR;{[QN]|[E{I|L}]|[KN]}[YG]G[RV]TR 5.3379;4.3978;4.3686;4.1334;4.097;4.0623;3.8502;3.8209;3.7755;3.7755 -;-;-;-;-;-;-;-;-;- 1060 1 1.257 64436.5 1.0 7298 4744 12039 HBL1_DMSO_200M_050219_2,12044 HBL1_DMSO_200M_050219_2,12044,AQHDPLLTGV False True AQHDPLLTGV 64.748393 525.783374011517 66153354.0 12039.0 nc|ENSG00000133136|A0A804HLA8|GNG5B;;ENSG00000174021|ENST00000370645|GNG5 8.811511993408203 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12045 64.75 76.0 761100.0 25 0 58076.0 + 38140 TPMPPISSV 9 90 464.7440682216888 927.4735835101776 2 464.7443115115166 MULTI CID FTMS 0 0 0 12039 710258.125 0.4576196832521971 -2 0.2039794921875 6 Unmodified _TPMPPISSV_ ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10 26.88365393820708 0.1891292719743517 4 PP{I|L}SW 5 5 22.659 0.0 0.0 2.4431 0.0 0.0 329.14146620918126 0.0 329.14146620918126 0.0 1.9797793478324088 0.0 0.0 0 0.3935078169319297 0.0 0.0 0.0 PP{I|L}SW 2.4431 - 127 1 1.257 51498.3 1.0 7299 4744 12039 HBL1_DMSO_200M_050219_2,12045 HBL1_DMSO_200M_050219_2,12045,TPMPPISSV False True TPMPPISSV 64.750137 464.744311511517 20098530.0 12039.0 ENSG00000086827|ENST00000200135|ZW10;;nc|ENSG00000086827|O43264-2|ZW10 0.9754799207051597 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12046 64.753 152.0 625920.0 25 0 231350.0 -1 0 71 1045.4163518907835 2088.818150848367 2 1045.415576159954 MULTI CID FTMS 0 0 0 12039 720758.3125 1.0 0 0.0 7 4 [YQ]{I|L}ENY 6 -1 72.725 0.0 0.0 3.4816 0.0 0.0 0.0 1275.441061080471 1275.441061080471 52.011883050770734 0.0 0.0 0.0 0 1.5 1.3010299956639813 0.2887254899964357 1.642159058960253 [YQ]{I|L}ENY 3.4816 - 569 1 1.257 70853.1 1.0 7300 4744 12039 HBL1_DMSO_200M_050219_2,12046 HBL1_DMSO_200M_050219_2,12046, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12047 64.756 114.0 669610.0 25 0 228210.0 + 27924 PLTLTEGV 8 75 415.23571666984174 828.4568804064835 2 415.2342407107353 MULTI CID FTMS 0 0 0 12039 674653.0625 1.0 0 0.0 8 Unmodified _PLTLTEGV_ REV__ENSG00000105767|ENST00000222374|CADM4 6.354104778181461 0.7857632046190106 4 {I|L}PW 3 -1 21.427 0.0 0.0 2.5863 0.0 0.0 414.2299330014829 0.0 414.2299330014829 0.0 10.830742997091267 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}PW 2.5863 - 22 + 1 1.257 65461.1 1.0 7301 4744 12039 HBL1_DMSO_200M_050219_2,12047 HBL1_DMSO_200M_050219_2,12047,PLTLTEGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12048 64.757 56.0 1053800.0 25 0 47060.0 + 38180 TPRFLLEAN 9 100 530.7910346489405 1059.5675163646808 2 531.2871581912041 MULTI CID FTMS 0 0 0 12039 755831.0625 0.5589588414319903 2 -0.1574325561523437 9 Unmodified _TPRFLLEAN_ REV__ENSG00000159256|ENST00000400485|MORC3 15.847184025352805 0.4077185912009129 4 [TP]W{I|L} 4 -1 29.654 0.0 0.0 2.7986 0.0 0.0 0.0 559.2835768068012 559.2835768068012 8.585587276195454 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.0 0.0 [TP]W{I|L} 2.7986 - 254 + 1 1.257 52734.1 1.0 7302 4744 12039 HBL1_DMSO_200M_050219_2,12048 HBL1_DMSO_200M_050219_2,12048,TPRFLLEAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12049 64.764 363.0 213750.0 25 0 18192.0 -1 0 80 964.4447607727724 2890.312452918517 3 965.1142455935478 MULTI CID FTMS 0 0 0 12039 681983.3125 1.0 0 0.0 10 4 [NP]{I|L}NWQ[RD]{M(Oxidation (M))|F} 9 -1 12.598 0.0 0.0 0.43586 0.0 0.0 0.0 1716.729175901192 1716.729175901192 5.15031251017078 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}NWQ[RD]{M(Oxidation (M))|F} 0.43586 - 474 1 1.257 60579.0 1.0 7303 4744 12039 HBL1_DMSO_200M_050219_2,12049 HBL1_DMSO_200M_050219_2,12049, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12050 64.766 143.0 594830.0 25 0 55988.0 -1 VPLDGRPMNI 10 95 564.2973087569122 1126.5800645806244 2 564.2979003787041 MULTI CID FTMS 0 0 0 12039 600894.75 1.0 0 0.0 11 Oxidation (M) _VPLDGRPM(Oxidation (M))NI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 24.99096001346401 0.4071966087057876 4 VP{I|L}D 4 -1 60.349 0.0 0.0 5.3569 0.0 0.0 0.0 699.3263414295404 699.3263414295404 20.2261535423866 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.3807196863200844 0.0 VP{I|L}D 5.3569 + + 390 + 1 1.257 70981.0 1.0 7304 4744 12039 HBL1_DMSO_200M_050219_2,12050 HBL1_DMSO_200M_050219_2,12050,VPLDGRPMNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12051 64.768 64.0 834200.0 25 0 99570.0 + 25092 MPWYQRRI 8 64 383.87104558885255 1148.5913073667575 3 383.8711120486259 MULTI CID FTMS 0 0 0 12039 534913.1875 0.7961026127007532 -2 0.2039794921875 12 Unmodified _MPWYQRRI_ ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1;nc|ENSG00000176623|Q96DB5-3|RMDN1 19.438996006549623 0.6237395211498085 4 M{I|L}P 3 7 26.198 0.0 0.0 2.2809 0.0 0.0 0.0 804.3929564232524 804.3929564232524 13.433677739595034 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L}P 2.2809 - 25 + 1 1.257 52091.4 1.0 7305 4744 12039 HBL1_DMSO_200M_050219_2,12051 HBL1_DMSO_200M_050219_2,12051,MPWYQRRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12052 64.771 151.0 391040.0 25 0 27991.0 + 256 ADAPIVAHL 9 95 453.7558059840875 905.497059034975 2 453.7559997439384 MULTI CID FTMS 0 0 0 12039 471710.875 0.1107818074960941 3 -0.2553863525390625 13 Unmodified _ADAPIVAHL_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 32.116972079565 0.1225432171549407 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L}VAH{I|L} 8 2 + 43.089 0.0 0.0 4.7586 4.7586 85.485 0.0 0.0 0.0 17.68324847433449 8.330781559871859 8.330781559871859 43.089323596742176 0 0.4247425010840047 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L}VAH{I|L} 4.7586 - 128 + 1 1.257 52402.0 1.0 7306 4744 12039 HBL1_DMSO_200M_050219_2,12052 HBL1_DMSO_200M_050219_2,12052,ADAPIVAHL True True ADAPIVAHL 64.771001 453.755999743938 106833456.0 12039.0 nc|ENSG00000110090|P50416-2|CPT1A;;ENSG00000110090|ENST00000265641|CPT1A 6.79531717300415 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12053 64.774 159.0 521020.0 25 0 35474.0 -1 FCCPHCSL 8 116 540.7066767030967 1079.3988004729931 2 540.7065307497978 MULTI CID FTMS 0 0 0 12039 463858.0625 1.0 0 0.0 14 3 Carbamidomethyl (C) _FC(Carbamidomethyl (C))C(Carbamidomethyl (C))PHC(Carbamidomethyl (C))SL_ ENSG00000204644|ENST00000376883|ZFP57;nc|ENSG00000204644|Q9NU63-2|ZFP57;nc|ENSG00000204644|Q9NU63|ZFP57 5.760428011301431 0.7893668129297577 4 S{I|L} 2 -1 21.013 0.0 0.0 1.9468 0.0 0.0 861.2715401964293 0.0 861.2715401964293 0.0 9.33098439955742 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 S{I|L} 1.9468 + + 194 + 1 1.257 69682.8 1.0 7307 4744 12039 HBL1_DMSO_200M_050219_2,12053 HBL1_DMSO_200M_050219_2,12053,FCCPHCSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12054 64.781 394.0 342850.0 25 0 29043.0 + -1 LHSKCCDDL 9 155 574.2492828454451 1146.4840127576902 2 574.2496826052666 MULTI CID FTMS 0 0 0 12039 442873.53125 0.4551251007271107 3 -0.2553863525390625 15 2 Carbamidomethyl (C) _LHSKC(Carbamidomethyl (C))C(Carbamidomethyl (C))DDL_ REV__ENSG00000162975|ENST00000295082|KCNF1 15.847184025352805 0.4077185912009129 4 [H{I|L}]MG{[HG]|PP}{M(Oxidation (M))|F}C{M(Oxidation (M))|F}V 10 -1 + 32.31 0.0 0.0 2.8182 2.8182 61.501 0.0 0.0 0.0 0.4255235068546277 1.1611958271443932 0.4255235068546277 0.4255235068546277 0 0.0 0.7695510786217261 0.0 0.0 [H{I|L}]MG{[HG]|PP}{M(Oxidation (M))|F}C{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{M(Oxidation (M))|F}C{M(Oxidation (M))|F}V;[H{I|L}]MG[DC]EP{M(Oxidation (M))|F}V;[H{I|L}]M[HN]{M(Oxidation (M))|F}C{M(Oxidation (M))|F}V;[H{I|L}]M[C(Carbamidomethyl (C))D]EP{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HG{[HG]|PP}{M(Oxidation (M))|F}C{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HG[DC]EP{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H[HN]{M(Oxidation (M))|F}C{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H[C(Carbamidomethyl (C))D]EP{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}G{[HG]|PP}{M(Oxidation (M))|F}C{M(Oxidation (M))|F}V 2.8182;2.781;2.7491;2.6646;2.5955;2.4648;2.3958;2.3112;2.2422;1.72 -;-;-;-;-;-;-;-;-;- 1547 1 1.257 106708.3 1.0 7308 4744 12039 HBL1_DMSO_200M_050219_2,12054 HBL1_DMSO_200M_050219_2,12054,LHSKCCDDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12055 64.784 162.0 370520.0 25 0 60281.0 + + 30848 RIPERFFPG 9 101 559.8056841720249 1117.5968154108498 2 559.8088867068291 MULTI CID FTMS 0 0 0 12039 294787.65625 0.4783384284675207 -4 0.4156265258789062 16 Unmodified _RILEVCWLS_ ENST00000495562.5_1_1:202910703-202913132:-|nuORF;ENSG00000159346|ENST00000340990|ADIPOR1;ENSG00000006831|ENST00000357103|ADIPOR2 10.823927491677226 0.5436922275383211 4 [VG]{I|L}[EP]Y[Q{I|L}]S{I|L} 10 -1 + 22.228 0.0 0.0 1.9889 1.9889 75.949 0.0 0.0 0.0 -1.9282795646333464 3.0197094363721 -1.9282795646333464 13.18975053529811 0 0.4158850665378676 1.2218487496163564 0.2887254899964357 0.0 [VG]{I|L}[EP]Y[Q{I|L}]S{I|L};KC{I|L}[WQ][Q{I|L}]S{I|L};KC{I|L}[YT][YK]S{I|L} 1.9889;0.80871;0.34085 -;-;- 80 + 1 1.257 53352.7 1.0 7309 4744 12039 HBL1_DMSO_200M_050219_2,12055 HBL1_DMSO_200M_050219_2,12055,RILEVCWLS False False RIPERFFPG 64.784418 559.808886706829 2571130.75 12039.0 ENST00000495562.5_1_1:202910703-202913132:-|nuORF;;ENSG00000159346|ENST00000340990|ADIPOR1;;ENSG00000006831|ENST00000357103|ADIPOR2 4.6121822992960615 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12056 64.788 169.0 662100.0 25 0 133630.0 -1 0 99 324.21598820278143 646.4174234723629 2 324.2155334353447 MULTI CID FTMS 0 0 0 12039 294480.15625 0.1595524732401432 -3 0.3036956787109375 17 4 {M(Oxidation (M))|F}{I|L}RV{I|L} 5 -1 + 33.697 0.0 0.0 5.213 5.213 80.484 0.0 0.0 0.0 10.347521035364498 8.00984766077626 8.00984766077626 8.00984766077626 0 0.7429928190999391 0.0 0.0 0.25 {M(Oxidation (M))|F}{I|L}RV{I|L};{M(Oxidation (M))|F}{I|L}{I|L}[RV];[R{I|L}]{M(Oxidation (M))|F}V{I|L} 5.213;3.9738;3.6122 -;-;- 27 + 1 1.257 94367.0 1.0 7310 4744 12039 HBL1_DMSO_200M_050219_2,12056 HBL1_DMSO_200M_050219_2,12056, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12057 64.797 525.0 222020.0 25 0 14822.0 + 17039 YFIRDVKSL 9 140 570.8279630547713 1139.6413731763423 2 570.8246337771416 MULTI CID FTMS 0 0 0 12039 219329.359375 0.338963299249325 7 -0.6526336669921875 18 Unmodified _KKNQKSAHSI_ ENSG00000113318|ENST00000265081|MSH3 27.628801355627647 0.3479284626772844 4 VKS{I|L} 4 7 47.735 0.0 0.0 4.1886 0.0 0.0 694.3445602269594 0.0 694.3445602269594 0.0 21.83598065080218 0.0 0.0 0 1.2302046884880935 0.0 0.3494850021680094 0.0 VKS{I|L} 4.1886 - 1335 1 1.257 90270.8 1.0 7311 4744 12039 HBL1_DMSO_200M_050219_2,12057 HBL1_DMSO_200M_050219_2,12057,KKNQKSAHSI False False YFIRDVKSL 64.796957 570.824633777142 5917877.0 12039.0 ENSG00000113318|ENST00000265081|MSH3 6.605247974395752 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12058 64.809 630.0 179560.0 25 0 20156.0 -1 VIACVLSL 8 132 437.7568223301196 0 437.7568542361259 PEAK CID FTMS 0 0 0 12039 203528.078125 1.0 0 0.0 19 Carbamidomethyl (C) _VIAC(Carbamidomethyl (C))VLSL_ ENSG00000080822|ENST00000341181|CLDND1;ENSG00000204174|ENST00000374312|NPY4R;ENSG00000264717|ENST00000576178|NPY4R2;ENST00000502980.1_1_3:98239917-98241743:-|nuORF;ENST00000507411.5_1_3:98235680-98240280:-|nuORF;ENST00000508503.5_1_3:98235702-98241699:-|nuORF;ENST00000510541.5_1_3:98240175-98241743:-|nuORF;ENST00000513988.1_1_3:98237648-98240280:-|nuORF;nc|ENSG00000080822|Q9NY35-2|CLDND1 28.17323086031832 0.2634958848191769 4 S{I|L}VVG 5 -1 15.56 0.0 0.0 1.7813 0.0 0.0 349.1658530569204 66.03580652408436 415.2016595810048 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 S{I|L}VVG 1.7813 - 262 + 1 1.257 91684.5 1.0 7312 4744 12039 HBL1_DMSO_200M_050219_2,12058 HBL1_DMSO_200M_050219_2,12058,VIACVLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12059 64.819 557.0 354070.0 25 0 41021.0 + 17052 KLADDVDLEQV 11 173 622.8216792857355 1243.628805638271 2 623.3203613162041 MULTI CID FTMS 0 0 0 12039 200020.078125 0.2038826606156969 -3 0.3036956787109375 20 Unmodified _KLADDVDLEQV_ ENSG00000165280|ENST00000358901|VCP;ENST00000480327.1_1_9:35060776-35061606:-|nuORF;ENST00000493886.5_1_9:35057116-35062147:-|nuORF 37.07464296494664 0.257459615863268 4 {NN|[MP]|[D{I|L}]|[EV]}EKGVD{I|L} 8 7 57.518 0.0 0.0 4.625 0.0 0.0 0.0 371.1554529373522 371.1554529373522 34.30002503133046 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.913529196767072 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}EKGVD{I|L} 4.625 - 5698 1 1.257 150552.8 1.0 7313 4744 12039 HBL1_DMSO_200M_050219_2,12059 HBL1_DMSO_200M_050219_2,12059,KLADDVDLEQV False True KLADDVDLEQV 64.818901 623.320361316204 20600566.0 12039.0 ENST00000480327.1_1_9:35060776-35061606:-|nuORF;;ENSG00000165280|ENST00000358901|VCP;;ENST00000493886.5_1_9:35057116-35062147:-|nuORF 5.252565860748291 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12061 64.823 4.4 11926000.0 25 0 2001200.0 + 37354 TKHSILTLK 9 60 520.8266498655075 1039.638746797815 2 520.8274413943291 MULTI CID FTMS 0 0 0 12060 12859216.0 1.0 0 0.0 1 Unmodified _TKHSILTLK_ ENST00000415794.1_1_3:139212742-139212994:+|nuORF 36.506200033944 0.094635877243972 4 {I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]T{I|L}K 8 5 + 35.648 0.0 0.0 3.4289 3.4289 80.729 0.0 0.0 0.0 4.69273760456403 11.624628150806371 4.69273760456403 35.648350154927826 0 1.0 0.0 0.0 0.3252574989159953 {I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]T{I|L}K 3.4289 - 53 + 1 1.249 46549.1 1.0 7314 4745 12060 HBL1_DMSO_200M_050219_2,12061 HBL1_DMSO_200M_050219_2,12061,TKHSILTLK True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12062 64.824 28.0 909010.0 25 0 101140.0 -1 QDCCVKTELLG 11 50 633.2962857380936 1264.5780185429871 2 633.2972289919853 MULTI CID FTMS 0 0 0 12060 2609227.5 0.8760834459680088 1 -0.0773086547851562 2 Carbamidomethyl (C) _QDC(Carbamidomethyl (C))CVKTELLG_ ENSG00000181090|ENST00000460843|EHMT1;nc|ENSG00000181090|Q9H9B1-3|EHMT1;nc|ENSG00000181090|Q9H9B1-4|EHMT1 8.155526934196011 0.8366696279279818 4 V{I|L}{I|L}{[VA]|[{I|L}G]} 5 -1 27.218 0.0 0.0 2.1524 0.0 0.0 751.2251454084 0.0 751.2251454084 0.0 14.24279286061882 0.0 0.0 0 0.5 0.0 0.0 0.0 V{I|L}{I|L}{[VA]|[{I|L}G]} 2.1524 - 44 1 1.249 27441.0 1.0 7315 4745 12060 HBL1_DMSO_200M_050219_2,12062 HBL1_DMSO_200M_050219_2,12062,QDCCVKTELLG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12063 64.825 32.0 1373200.0 25 0 329720.0 + 4987 DGRYALVV 8 62 446.7477968197013 891.4810407062025 2 446.7482177615166 MULTI CID FTMS 0 0 0 12060 1852481.0 0.9169832106200864 -1 0.0801239013671875 3 Unmodified _DGRYALVV_ ENSG00000112972|ENST00000325110|HMGCS1 13.90604991867851 0.7054780292895731 4 {I|L}VV 3 5 31.198 0.0 0.0 3.4996 0.0 0.0 562.2511463849625 0.0 562.2511463849625 0.0 15.713337517843655 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}VV 3.4996 + + 18 1 1.249 41138.8 1.0 7316 4745 12060 HBL1_DMSO_200M_050219_2,12063 HBL1_DMSO_200M_050219_2,12063,DGRYALVV False True DGRYALVV 64.825353 446.748217761517 16396082.0 12060.0 ENSG00000112972|ENST00000325110|HMGCS1 2.9706139167149863 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12064 64.829 188.0 869400.0 25 0 104230.0 + 4201 DAPKAGQLEAW 11 127 593.2982890591308 1184.5820251850614 2 593.2989379763603 MULTI CID FTMS 0 0 0 12060 1370879.5 0.8781082182556554 1 -0.0773086547851562 4 Unmodified _DAPKAGQLEAW_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 67.08073823543168 0.0408645806987127 4 {[QN]|[E{I|L}]|[KN]}A[PA]{I|L}EADAW 11 7 + 85.154 0.0 0.0 7.1885 7.1885 76.63 0.0 0.0 0.0 0.28383394491253 10.20373644975622 0.28383394491253 0.28383394491253 0 0.9247425010840048 0.7695510786217261 1.424742501084005 1.7544321917401078 {[QN]|[E{I|L}]|[KN]}A[PA]{I|L}EADAW;[KP]AAN{I|L}EADAW;{[QN]|[E{I|L}]|[KN]}A[PA]{I|L}EGEAW;[KP]AAN{I|L}EGEAW;[KP]QQ{I|L}EADAW;QQ{I|L}EKPADAW;QQ[KP]{I|L}EADAW;{[QN]|[E{I|L}]|[KN]}QQKPADAW;[KP]AAGG{I|L}EADAW;{[QN]|[E{I|L}]|[KN]}A[PA]E{I|L}ADAW 7.1885;7.1645;6.8649;6.841;6.7075;6.4708;6.4184;6.4167;6.3939;6.3874 -;-;-;-;-;-;-;-;-;- 5178 1 1.249 124790.3 1.0 7317 4745 12060 HBL1_DMSO_200M_050219_2,12064 HBL1_DMSO_200M_050219_2,12064,DAPKAGQLEAW True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12065 64.83 34.0 1177200.0 25 0 107230.0 + 22358 LPSPLKQTI 9 79 498.8081792005347 995.6018054678694 2 498.8083373904228 MULTI CID FTMS 0 0 0 12060 1290780.5 0.0048718196139189 18 -1.6809463500976562 5 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 32.78568957990786 0.1150597335874693 4 {I|L}PS[{I|L}P][KQ]T{I|L} 9 0 + 56.437 0.0 0.0 5.6686 5.6686 89.626 0.0 0.0 0.0 29.26985621489237 4.442059438411903 4.442059438411903 56.43684392785687 0 0.8807196863200843 1.6989700043360187 0.3807196863200844 0.0 + + {I|L}PS[{I|L}P][KQ]T{I|L} 5.6686 + + 179 + 1 1.249 37540.7 1.0 7318 4745 12060 HBL1_DMSO_200M_050219_2,12065 HBL1_DMSO_200M_050219_2,12065,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12066 64.832 53.0 1024500.0 25 0 193750.0 + 43230 WAPPATRL 8 71 456.2566666684605 910.4987804037212 2 456.2566100955009 MULTI CID FTMS 0 0 0 12060 1238633.125 0.6378484109027398 -2 0.1931381225585937 6 Unmodified _WAPPATRL_ REV__ENST00000297323.11_1_7:45758358-45758466:+|nuORF 2.302733041254933 0.8103549651115762 4 V 1 -1 10.0 0.0 0.0 1.0983 0.0 0.0 793.4190512550867 0.0 793.4190512550867 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0983 - 3 + 1 1.249 47519.3 1.0 7319 4745 12060 HBL1_DMSO_200M_050219_2,12066 HBL1_DMSO_200M_050219_2,12066,WAPPATRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12067 64.833 45.0 1466400.0 25 0 164040.0 + 44618 YPFKPPKI 8 77 495.2945804491195 988.574607965039 2 495.2950317263603 MULTI CID FTMS 0 0 0 12060 1188855.5 0.2580461190323245 -9 0.8786087036132812 7 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 42.09456458481378 0.1992492688217789 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 67.477 0.0 0.0 6.8257 6.8257 94.343 0.0 0.0 0.0 44.7564045197371 7.924194852345678 7.924194852345678 67.47678883890849 0 0.7614393726401688 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L} 6.8257 + + 157 + 1 1.249 54150.9 1.0 7320 4745 12060 HBL1_DMSO_200M_050219_2,12067 HBL1_DMSO_200M_050219_2,12067,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12068 64.834 38.0 1089100.0 25 0 119080.0 + 13675 HQDPQSIFV 9 67 535.7666865115796 1069.518820089959 2 535.7670165896416 MULTI CID FTMS 0 0 0 12060 1000882.25 1.0 0 0.0 8 Unmodified _HQDPQSIFV_ ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1 27.628801355627647 0.1796483985696185 4 [HQ]D[QP]S{I|L}{M(Oxidation (M))|F}V 9 0 + 34.287 0.0 0.0 3.2059 3.2059 80.02 0.0 0.0 0.0 3.748162098249004 11.0996153466158 3.748162098249004 33.426003480513494 0 0.6677353201839438 0.0 0.9247425010840048 0.0 + + [HQ]D[QP]S{I|L}{M(Oxidation (M))|F}V;[HQ]DAA[RV]HH 3.2059;0.080522 +;- + 56 1 1.249 37321.1 1.0 7321 4745 12060 HBL1_DMSO_200M_050219_2,12068 HBL1_DMSO_200M_050219_2,12068,HQDPQSIFV False True HQDPQSIFV 64.833928 535.767016589642 19366402.0 12060.0 nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;;ENSG00000131503|ENST00000360839|ANKHD1 8.101698239644369 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12069 64.836 111.0 1179800.0 25 0 77748.0 + -1 LSCQSSCYM 9 122 547.7014382015722 1093.3883234699442 2 547.7017089724541 MULTI CID FTMS 0 0 0 12060 949610.8125 1.0 0 0.0 9 Carbamidomethyl (C),Oxidation (M) _LSC(Carbamidomethyl (C))QSSCYM(Oxidation (M))_ REV__ENST00000465118.6_1_1:85031537-85031576:-|nuORF 6.723162845929126 0.6799819581413107 4 {I|L}S 2 -1 24.776 0.0 0.0 2.266 0.0 0.0 0.0 890.2525725447848 890.2525725447848 5.836134377877325 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}S 2.266 + + 221 + 1 1.249 105264.0 1.0 7322 4745 12060 HBL1_DMSO_200M_050219_2,12069 HBL1_DMSO_200M_050219_2,12069,LSCQSSCYM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12070 64.837 34.0 1232400.0 25 0 92111.0 19762 LGQLNEVGL 9 85 471.7682185102676 941.5218840873353 2 472.2714416384697 MULTI CID FTMS 0 0 0 12060 665663.375 0.4497935587701013 -3 0.2841033935546875 10 Unmodified _LGQLNEVGL_ ENSG00000135870|ENST00000367696|RC3H1;nc|ENSG00000135870|Q5TC82-2|RC3H1 14.581692164780916 0.4419739649577144 4 PYS[VP]VG{I|L} 8 6 23.365 0.0 0.0 2.4816 0.0 0.0 111.05551108336404 0.0 111.05551108336404 0.0 10.17728766960431 0.0 0.0 0 0.0 0.0 0.0 0.0 PYS[VP]VG{I|L} 2.4816 - 132 + 1 1.249 35947.1 1.0 7323 4745 12060 HBL1_DMSO_200M_050219_2,12070 HBL1_DMSO_200M_050219_2,12070,LGQLNEVGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12071 64.84 135.0 674520.0 25 0 118890.0 + 11387 GGIDRVYEI 9 104 511.2693906317742 1020.5242283303484 2 511.2697326540947 MULTI CID FTMS 0 0 0 12060 613117.8125 0.2976057714232251 -2 0.1931381225585937 11 Unmodified _GGIDRVYEI_ ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1 28.49450938151212 0.1686335738423394 4 {[QN]|[E{I|L}]|[KN]}QQVYE{I|L} 8 4 + 41.342 0.0 0.0 4.051 4.051 64.445 0.0 0.0 0.0 0.2615901796582491 14.342503590103622 0.2615901796582491 0.2615901796582491 0 0.6643943297944485 0.0 0.2302046884880938 0.0 {[QN]|[E{I|L}]|[KN]}QQVYE{I|L};[YE][RV]D{I|L}N{I|L};[YE][RV]NVE{I|L};[YE][RV]VNE{I|L};[{I|L}P][C(Carbamidomethyl (C))K]VYE{I|L};GG{I|L}DRVYE{I|L};{NN|[MP]|[D{I|L}]|[EV]}NRVYE{I|L};{[QN]|[E{I|L}]|[KN]}QQYVE{I|L};[YE][RV]VEN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DRVYE{I|L} 4.051;4.0254;3.8703;3.8703;3.8047;3.5857;3.4524;3.3661;3.3405;3.3235 -;-;-;-;-;+;-;-;-;- + 809 1 1.249 72531.3 1.0 7324 4745 12060 HBL1_DMSO_200M_050219_2,12071 HBL1_DMSO_200M_050219_2,12071,GGIDRVYEI False True GGIDRVYEI 64.840221 511.269732654095 33318906.0 12060.0 chr16:75631855-75635680|25|13.4|0.73|4.2|-|0|KARS1,KARS1|1;;nc|ENSG00000065427|Q15046-2|KARS1;;ENSG00000065427|ENST00000302445|KARS1 3.8396908044815055 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12072 64.846 335.0 696970.0 25 0 46588.0 + 41065 VMPEAVPEV 9 169 485.7493187319013 969.4840845306028 2 485.7490112185478 MULTI CID FTMS 0 0 0 12060 523163.46875 0.5709729618821378 -2 0.1931381225585937 12 Unmodified _VMPEAVPEV_ ENSG00000101191|ENST00000395343|DIDO1;nc|ENSG00000101191|Q9BTC0-1|DIDO1 48.345845343767074 0.0439967357579942 4 [EP]AVMV 6 4 46.52 0.0 0.0 4.7984 0.0 0.0 0.0 340.1496408693218 340.1496408693218 23.71157926182248 0.0 0.0 0.0 0 0.7134679910804405 1.3979400086720375 0.0 0.0 [EP]AVMV 4.7984 - 1270 1 1.249 178692.8 1.0 7325 4745 12060 HBL1_DMSO_200M_050219_2,12072 HBL1_DMSO_200M_050219_2,12072,VMPEAVPEV True True VMPEAVPEV 64.84629 485.749011218548 10222994.0 12060.0 nc|ENSG00000101191|Q9BTC0-1|DIDO1;;ENSG00000101191|ENST00000395343|DIDO1 3.9532103538513184 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12073 64.853 356.0 462390.0 25 0 29701.0 + 38214 TPRIQGLTV 9 159 492.7953410618336 983.5761291904672 2 492.7954894900322 MULTI CID FTMS 0 0 0 12060 444517.25 0.7367407860735705 1 -0.0773086547851562 13 Unmodified _TPRIQGLTV_ ENSG00000197102|ENST00000360184|DYNC1H1 40.23920728925047 0.0741434193262949 4 [TP]R{I|L}QG{I|L}TV 9 0 + 47.507 0.0 0.0 4.83 4.83 77.939 0.0 0.0 0.0 6.321224933621181 26.564725233975324 6.321224933621181 6.959435497058308 0 0.5 0.9208187539523752 0.4247425010840047 0.0 + + [TP]R{I|L}QG{I|L}TV;{[QN]|[E{I|L}]|[KN]}K[QP]G{I|L}TV;[TP]R{I|L}[AG]G{I|L}TV;[{I|L}T][RP]QG{I|L}TV;[TP]R{I|L}TG[Q{I|L}]V;[{I|L}T][RP][AG]G{I|L}TV;{[TV]|[{I|L}S]}AV{[{M(Oxidation (M))|F}H]|[RQ]}[{I|L}V]V;{NN|[MP]|[D{I|L}]|[EV]}[RN]R[{I|L}V]V;{NN|[MP]|[D{I|L}]|[EV]}[RN]VG[{I|L}V]V;[{I|L}T][RP]TG[Q{I|L}]V 4.83;4.1224;3.8938;3.3746;2.8529;2.4384;2.3453;1.6186;1.418;1.3975 +;-;-;-;-;-;-;-;-;- + 1147 1 1.249 126459.3 1.0 7326 4745 12060 HBL1_DMSO_200M_050219_2,12073 HBL1_DMSO_200M_050219_2,12073,TPRIQGLTV True True TPRIQGLTV 64.852713 492.795489490032 5171995.5 12060.0 ENSG00000197102|ENST00000360184|DYNC1H1 3.868931611378988 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12074 64.859 376.0 491040.0 25 0 38917.0 + 26224 NQIPTVNNL 9 185 506.77535457420544 1011.5361562152108 2 506.7751647830009 MULTI CID FTMS 0 0 0 12060 398785.34375 0.3044359011672984 -5 0.4957504272460937 14 Unmodified _NQIPTVNNL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 78.7280429016045 0.0178249292250809 4 [{I|L}P]SND{I|L}{I|L}D 8 7 40.474 0.0 0.0 4.0012 0.0 0.0 0.0 141.08430012582224 141.08430012582224 1.3331508540221506 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.9876954943324544 0.5242275032520141 [{I|L}P]SND{I|L}{I|L}D 4.0012 - 5977 1 1.249 144435.7 1.0 7327 4745 12060 HBL1_DMSO_200M_050219_2,12074 HBL1_DMSO_200M_050219_2,12074,NQIPTVNNL True True NQIPTVNNL 64.859467 506.775164783001 32844564.0 12060.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 3.792753299077352 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12075 64.863 168.0 587710.0 25 0 46071.0 + 11245 GERYGTPSL 9 124 490.2470620157574 978.4795710983148 2 490.2476989626884 MULTI CID FTMS 0 0 0 12060 433492.71875 0.8999228967468396 -1 0.0801239013671875 15 Unmodified _GERYGTPSL_ REV__ENST00000478000.5_1_7:938560-944975:-|nuORF 23.1484247019978 0.2366544122328345 4 VY 2 -1 19.464 0.0 0.0 1.9892 0.0 0.0 698.3361517641337 0.0 698.3361517641337 0.0 0.4384623891016268 0.0 0.0 0 0.0 0.0 0.0 0.0 VY 1.9892 - 516 + 1 1.249 80091.4 1.0 7328 4745 12060 HBL1_DMSO_200M_050219_2,12075 HBL1_DMSO_200M_050219_2,12075,GERYGTPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12076 64.871 443.0 400730.0 25 0 40693.0 + 20409 LLHGRSAN 8 158 434.2431596063684 866.4717662795367 2 434.2437621951103 MULTI CID FTMS 0 0 0 12060 347017.75 0.6764396145271134 -2 0.1931381225585937 16 Unmodified _LLHGRSAN_ REV__ENSG00000127603|ENST00000564288|MACF1;REV__nc|ENSG00000127603|Q9UPN3-5|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1 2.889219685676258 0.8067950007271085 4 {I|L}{I|L}[R{M(Oxidation (M))|F}]{I|L} 5 -1 13.256 0.0 0.0 1.5299 0.0 0.0 0.0 221.04064990674297 221.04064990674297 3.6518881017853033 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {I|L}{I|L}[R{M(Oxidation (M))|F}]{I|L} 1.5299 - 38 1 1.249 142517.2 1.0 7329 4745 12060 HBL1_DMSO_200M_050219_2,12076 HBL1_DMSO_200M_050219_2,12076,LLHGRSAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12077 64.878 388.0 341860.0 25 0 41743.0 + 25093 MPWYQRRI 8 122 575.3029329190241 1148.591312904848 2 575.3042480349541 MULTI CID FTMS 0 0 0 12060 324653.1875 1.0 0 0.0 17 Unmodified _MPWYQRRI_ ENSG00000176623|ENST00000406452|RMDN1;nc|ENSG00000176623|Q96DB5-2|RMDN1;nc|ENSG00000176623|Q96DB5-3|RMDN1 40.44857923139169 0.2267865117615937 4 {I|L}D 2 8 38.443 0.0 0.0 3.347 0.0 0.0 0.0 917.4812716119748 917.4812716119748 7.345890323498033 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.0 {I|L}D 3.347 - 685 + 1 1.249 104043.9 1.0 7330 4745 12060 HBL1_DMSO_200M_050219_2,12077 HBL1_DMSO_200M_050219_2,12077,MPWYQRRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12078 64.886 402.0 271380.0 25 0 14014.0 + 4558 DAYRAEWQV 9 158 569.2698642795374 1136.525175625875 2 569.2705566287041 MULTI CID FTMS 0 0 0 12060 312958.40625 1.0 0 0.0 18 Unmodified _DAYRAEWQV_ ENSG00000108064|ENST00000487519|TFAM;ENST00000373899.3_1_10:60146421-60154831:+|nuORF;nc|ENSG00000108064|Q00059-2|TFAM 23.78978130925829 0.2284941198415988 4 {[DA]|[EG]}[YR]AEWQV 9 0 + 42.418 0.0 0.0 3.7323 3.7323 65.017 0.0 0.0 0.0 1.018529286880451 10.4402281476392 1.018529286880451 1.018529286880451 0 0.4604093769761876 1.2218487496163564 0.2742275032520141 0.0 + + {[DA]|[EG]}[YR]AEWQV;{NN|[MP]|[D{I|L}]|[EV]}[YN]AEWQV;[WQ]NY{I|L}VTDV;[{I|L}T]TSCAEWQV;{NN|[MP]|[D{I|L}]|[EV]}KCMDWQV;{[DA]|[EG]}{[QN]|[E{I|L}]|[KN]}Y{I|L}VTDV;{[DA]|[EG]}[NP]{[HG]|PP}{I|L}VTDV;{NN|[MP]|[D{I|L}]|[EV]}{[CP]|[EA]}Y{I|L}VTDV;[AG]V{[YD]|[{M(Oxidation (M))|F}M]}AEWQV;{[DA]|[EG]}[YR]AQVTDV 3.7323;3.6427;3.4522;3.4315;3.4277;3.4271;3.3643;3.3375;3.317;3.2908 +;-;-;-;-;-;-;-;-;- + 4901 1 1.249 85035.0 1.0 7331 4745 12060 HBL1_DMSO_200M_050219_2,12078 HBL1_DMSO_200M_050219_2,12078,DAYRAEWQV False True DAYRAEWQV 64.885972 569.270556628704 2006776.75 12060.0 ENSG00000108064|ENST00000487519|TFAM;;ENST00000373899.3_1_10:60146421-60154831:+|nuORF;;nc|ENSG00000108064|Q00059-2|TFAM 5.676018397013347 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12079 64.893 419.0 225050.0 25 0 88832.0 -1 0 88 579.1712796868876 578.1640032202876 1 579.1724731326103 MULTI CID FTMS 0 0 0 12060 286725.375 0.5095190961678829 2 -0.175262451171875 19 4 [YN]S 3 -1 16.031 0.0 0.0 2.7727 0.0 0.0 0.0 211.0092540349938 211.0092540349938 0.5462187404089072 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YN]S 2.7727 - 43 1 1.249 76770.6 1.0 7332 4745 12060 HBL1_DMSO_200M_050219_2,12079 HBL1_DMSO_200M_050219_2,12079, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12080 64.896 134.0 488670.0 25 0 66763.0 24039 LWALLVYNA 9 99 531.8007617129515 1061.586970492703 2 531.8023559451103 MULTI CID FTMS 0 0 0 12060 287084.9375 0.0038930141085026 12 -1.1058807373046875 20 Unmodified _LWALLVYNA_ ENSG00000112414|ENST00000367609|ADGRG6;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6 13.50788311687929 0.4710407108020397 4 VVY{[QG]|[NA]} 5 5 27.218 0.0 0.0 2.5639 0.0 0.0 497.2969837873063 0.0 497.2969837873063 0.0 14.030899869919438 0.0 0.0 0 0.5 0.0 0.0 0.0 VVY{[QG]|[NA]} 2.5639 - 90 1 1.249 59384.1 1.0 7333 4745 12060 HBL1_DMSO_200M_050219_2,12080 HBL1_DMSO_200M_050219_2,12080,LWALLVYNA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12082 64.9 6.6 6692000.0 25 0 626130.0 + 41403 VPLDGRPMNI 10 58 556.2999846710574 1110.5854164089146 2 556.3004028201103 MULTI CID FTMS 0 0 0 12081 7587350.0 0.9299234444922778 1 -0.0979537963867187 1 Unmodified _VPLDGRPMNI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 26.268140514670165 0.3785003716575977 4 VP{I|L}D 4 6 50.662 0.0 0.0 4.5617 0.0 0.0 0.0 683.3316644737911 683.3316644737911 23.460652899028567 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + VP{I|L}D 4.5617 + + 28 + 1 1.231 42486.8 1.0 7334 4746 12081 HBL1_DMSO_200M_050219_2,12082 HBL1_DMSO_200M_050219_2,12082,VPLDGRPMNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12083 64.901 16.0 2313200.0 25 0 212220.0 + 24851 MPLSTIREV 9 63 523.2887915949585 1044.563030256717 2 523.2894775271416 MULTI CID FTMS 0 0 0 12081 2470405.5 0.0758906082816547 4 -0.38330078125 2 Unmodified _MPLSTIREV_ ENSG00000105810|ENST00000424848|CDK6 17.11289562659939 0.3734572693229295 4 MP{I|L}S 4 5 55.42 0.0 0.0 5.3055 0.0 0.0 0.0 613.3334574898698 613.3334574898698 25.24227503252014 0.0 0.0 0.0 0 0.8252574989159953 1.5228787452803376 0.0 0.0 + MP{I|L}S 5.3055 + + 41 + 1 1.231 38936.5 1.0 7335 4746 12081 HBL1_DMSO_200M_050219_2,12083 HBL1_DMSO_200M_050219_2,12083,MPLSTIREV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12084 64.903 12.0 5784600.0 25 0 1064000.0 + 44612 YPFKPPKI 8 74 330.5324354067559 988.5754768204677 3 330.5320007205009 MULTI CID FTMS 0 0 0 12081 4220209.5 0.3864334439894361 -8 0.7633590698242188 3 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 15.847184025352805 0.6768015514314958 4 Y{I|L}MKPPK{I|L} 8 2 + 37.77 0.0 0.0 3.8206 3.8206 66.649 0.0 0.0 0.0 17.134936314212382 5.8315986292623165 5.8315986292623165 1.7609125905568137 0 0.0 0.0 0.0 0.0 Y{I|L}MKPPK{I|L};YP{M(Oxidation (M))|F}KPPK{I|L} 3.8206;3.6425 -;+ + 117 + 1 1.231 59895.8 1.0 7336 4746 12081 HBL1_DMSO_200M_050219_2,12084 HBL1_DMSO_200M_050219_2,12084,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12085 64.904 33.0 1585900.0 25 0 312970.0 + 39180 TYQAMVHEL 9 83 546.2629118192945 1090.5112707053888 2 546.2633544802666 MULTI CID FTMS 0 0 0 12081 1590727.75 0.4461060837297374 -1 0.0773086547851562 4 Unmodified _TYQAMVHEL_ ENSG00000136631|ENST00000644510|VPS45;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;nc|ENSG00000136631|Q9NRW7-2|VPS45 34.40172386719151 0.1061884637610825 4 [YT]QAMV 6 3 55.34 0.0 0.0 5.0746 0.0 0.0 0.0 394.17372942179935 394.17372942179935 27.912231819593444 0.0 0.0 0.0 0 0.6694451763165201 2.0 0.0 0.5 + [YT]QAMV 5.0746 + + 360 + 1 1.231 44355.6 1.0 7337 4746 12081 HBL1_DMSO_200M_050219_2,12085 HBL1_DMSO_200M_050219_2,12085,TYQAMVHEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12086 64.907 150.0 715320.0 25 0 115020.0 + 37013 TFPNGVKGL 9 112 466.7638337295896 931.5131145259792 2 466.7638122439384 MULTI CID FTMS 0 0 0 12081 734705.875 0.9771057098867408 1 -0.0979537963867187 5 Unmodified _TFPNGVKGL_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 39.957323273325 0.0756908302845263 4 [{M(Oxidation (M))|F}T]PNGVKAV 9 2 + 48.17 0.0 0.0 5.1712 5.1712 73.396 0.0 0.0 0.0 7.147642715192504 2.6884531229258 2.6884531229258 2.6884531229258 0 0.4247425010840047 0.0 0.0 0.7302046884880937 [{M(Oxidation (M))|F}T]PNGVKAV;[{M(Oxidation (M))|F}T]PNGVKG{I|L};[{M(Oxidation (M))|F}T]PGGGVKAV;[{M(Oxidation (M))|F}T]PGGGVKG{I|L};[{M(Oxidation (M))|F}T]PNG[KG]{I|L}V;[{M(Oxidation (M))|F}T]PNG[KG]V{I|L};[{M(Oxidation (M))|F}T]PGGG[KG]{I|L}V;[{M(Oxidation (M))|F}T]PGGG[KG]V{I|L} 5.1712;4.8826;4.1827;3.8941;3.652;3.3634;2.6635;2.3749 -;+;-;-;-;-;-;- + 254 + 1 1.231 87415.6 1.0 7338 4746 12081 HBL1_DMSO_200M_050219_2,12086 HBL1_DMSO_200M_050219_2,12086,TFPNGVKGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12087 64.913 328.0 451760.0 25 0 41116.0 + 30033 QTPQRLLEV 9 145 542.3117340738437 1082.6089152144873 2 542.3121826052666 MULTI CID FTMS 0 0 0 12081 516643.9375 0.0626493039012548 -3 0.27044677734375 6 Unmodified _QTPQRLLEV_ ENSG00000133119|ENST00000380071|RFC3;nc|ENSG00000133119|P40938-2|RFC3 62.57269311338072 0.0246576765497938 4 [QT]PQS 5 5 36.814 0.0 0.0 3.4005 0.0 0.0 0.0 538.3225191705686 538.3225191705686 7.835711019345283 0.0 0.0 0.0 0 0.6307196863200843 1.2218487496163564 0.3054621874040891 0.3807196863200844 [QT]PQS 3.4005 - 567 + 1 1.231 118016.2 1.0 7339 4746 12081 HBL1_DMSO_200M_050219_2,12087 HBL1_DMSO_200M_050219_2,12087,QTPQRLLEV True True QTPQRLLEV 64.912788 542.312182605267 132644056.0 12081.0 ENSG00000133119|ENST00000380071|RFC3;;nc|ENSG00000133119|P40938-2|RFC3 6.736358960469564 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12088 64.92 385.0 549630.0 25 0 226370.0 40305 VGVVAGGL 8 113 671.4109124358176 670.4036359692176 1 671.4113036990166 MULTI CID FTMS 0 0 0 12081 372808.53125 0.5863732580277221 2 -0.2145004272460937 7 Unmodified _VGVVAGGL_ ENSG00000182685|ENST00000328540|BRICD5;nc|ENSG00000182685|Q6PL45|BRICD5 2.889219685676258 0.8067950007271085 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GVC 5 6 15.441 0.0 0.0 2.3032 0.0 0.0 0.0 174.1924292643926 174.1924292643926 1.3049802773885002 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.5941876774005248 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GVC 2.3032 - 293 1 1.231 152843.1 1.0 7340 4746 12081 HBL1_DMSO_200M_050219_2,12088 HBL1_DMSO_200M_050219_2,12088,VGVVAGGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12089 64.927 427.0 262100.0 25 0 25937.0 + 27881 PLSKEPVL 8 142 441.7684155261089 0 441.7676574587822 PEAK CID FTMS 0 0 0 12081 353751.21875 0.8901727935822222 14 -1.3201828002929688 8 Unmodified _PLSKEPVL_ REV__ENSG00000064933|ENST00000441310|PMS1;REV__ENST00000421722.5_1_2:190656520-190720594:+|nuORF;REV__nc|ENSG00000064933|P54277-2|PMS1;REV__nc|ENSG00000064933|P54277-3|PMS1;REV__nc|ENSG00000064933|P54277-4|PMS1 20.453626601364224 0.4093984001168845 4 PEVTGV 6 -1 14.959 0.0 0.0 1.6969 0.0 0.0 230.16166426310764 66.0358141534789 296.19747841658653 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PEVTGV 1.6969 - 239 + 1 1.231 89759.2 1.0 7341 4746 12081 HBL1_DMSO_200M_050219_2,12089 HBL1_DMSO_200M_050219_2,12089,PLSKEPVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12090 64.93 162.0 451410.0 25 0 74538.0 + 12323 GSHGGDGW 8 100 386.6536950930808 771.2928372529616 2 386.6541625857353 MULTI CID FTMS 0 0 0 12081 334571.53125 0.1030144469580171 4 -0.38330078125 9 Unmodified _GSHGGDGW_ REV__chr19:42117432-42122126|39|13.56|0.5|4.75|-|ENST00000560804|POU2F2,POU2F2 0.7936320650641473 0.8195151834710337 4 [MT]S 3 -1 17.28 0.0 0.0 2.2404 0.0 0.0 0.0 449.1522923730757 449.1522923730757 1.7956061064919062 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [MT]S 2.2404 - 73 1 1.231 61111.5 1.0 7342 4746 12081 HBL1_DMSO_200M_050219_2,12090 HBL1_DMSO_200M_050219_2,12090,GSHGGDGW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12091 64.937 388.0 290230.0 25 0 17835.0 + 26220 NQINELKEL 9 150 550.8007997519333 1099.5870465706664 2 550.8018066287041 MULTI CID FTMS 0 0 0 12081 344534.0625 1.0 0 0.0 10 Unmodified _NQINELKEL_ ENSG00000152359|ENST00000428202|POC5;nc|ENSG00000152359|Q8NA72-2|POC5;nc|ENSG00000152359|Q8NA72-3|POC5 51.629811660486645 0.0367964933207742 4 {[QN]|[E{I|L}]|[KN]}{I|L}NE{I|L}AVS{I|L} 10 3 + 40.539 0.0 0.0 3.6868 3.6868 71.912 0.0 0.0 0.0 7.269987279362624 5.166297960033361 5.166297960033361 5.166297960033361 0 1.1677353201839438 0.0 1.1449285287645203 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}NE{I|L}AVS{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}NE{I|L}AVTV;{[QN]|[E{I|L}]|[KN]}{I|L}GGE{I|L}AVS{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}NE{I|L}A{I|L}SV;{[QN]|[E{I|L}]|[KN]}{I|L}GGE{I|L}AVTV;{[QN]|[E{I|L}]|[KN]}QVE{I|L}AVS{I|L};{[QN]|[E{I|L}]|[KN]}QVE{I|L}AVTV;{[QN]|[E{I|L}]|[KN]}{I|L}N{[QV]|[N{I|L}]|[RA]|[KV]}{[QG]|[NA]}S{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}GGE{I|L}A{I|L}SV;{[QN]|[E{I|L}]|[KN]}[AG]VE{I|L}AVS{I|L} 3.6868;3.2169;2.8533;2.5548;2.3835;2.347;1.8772;1.8634;1.7213;1.5135 -;-;-;-;-;-;-;-;-;- 870 + 1 1.231 88199.8 1.0 7343 4746 12081 HBL1_DMSO_200M_050219_2,12091 HBL1_DMSO_200M_050219_2,12091,NQINELKEL True True NQINELKEL 64.937455 550.801806628704 2675604.5 12081.0 nc|ENSG00000152359|Q8NA72-3|POC5;;nc|ENSG00000152359|Q8NA72-2|POC5;;ENSG00000152359|ENST00000428202|POC5 4.411472161610921 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12092 64.945 414.0 262500.0 25 0 14800.0 + 43161 VYQPMEKLY 9 129 585.7976293763295 1169.580705819459 2 585.7982055544853 MULTI CID FTMS 0 0 0 12081 281072.3125 1.0 0 0.0 11 Unmodified _VYQPMEKLY_ ENSG00000095139|ENST00000264028|ARCN1 36.12702656103203 0.0967173616627612 4 {NN|[MP]|[D{I|L}]|[EV]}EK{I|L}YQVY 9 6 + 43.436 0.0 0.0 3.7138 3.7138 75.082 0.0 0.0 0.0 8.37878693834704 10.330145895351848 8.37878693834704 8.37878693834704 0 0.3182503180159344 0.7695510786217261 0.6861818737241735 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}EK{I|L}YQVY;[YV][HA]KYQVY;{NN|[MP]|[D{I|L}]|[EV]}EK{I|L}Y[AG]VY;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}KYQVY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TRPYQVY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}MPYQVY;[YV][HA]KY[AG]VY;{[TV]|[{I|L}S]}G{I|L}MPYQVY;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}KY[AG]VY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TRPY[AG]VY 3.7138;2.9974;2.9265;2.8979;2.8775;2.348;2.2101;2.139;2.1106;2.0902 -;-;-;-;-;-;-;-;-;- 813 1 1.231 84059.6 1.0 7344 4746 12081 HBL1_DMSO_200M_050219_2,12092 HBL1_DMSO_200M_050219_2,12092,VYQPMEKLY True True VYQPMEKLY 64.944869 585.798205554485 2236920.25 12081.0 ENSG00000095139|ENST00000264028|ARCN1 5.491823514302571 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12093 64.953 440.0 579440.0 25 0 45515.0 + 16460 KAINVFVSA 9 189 474.77931730162913 947.5440816700584 2 474.7795593142509 MULTI CID FTMS 0 0 0 12081 271349.28125 0.4231439475859942 -2 0.1574325561523437 12 Unmodified _KAINVFVSA_ ENSG00000114209|ENST00000392750|PDCD10 54.773552608820026 0.0299037012502309 4 {[VA]|[{I|L}G]}QKV{M(Oxidation (M))|F}VSA 9 3 + 42.014 0.0 0.0 4.434 4.434 70.864 0.0 0.0 0.0 4.064465925698052 7.105059366945554 4.064465925698052 3.010299956639805 0 0.4957416651753049 0.6777807052660807 0.0 1.254432191740108 {[VA]|[{I|L}G]}QKV{M(Oxidation (M))|F}VSA;{[VA]|[{I|L}G]}AGKV{M(Oxidation (M))|F}VSA;{[QV]|[N{I|L}]|[RA]|[KV]}AKV{M(Oxidation (M))|F}VSA;[Q{I|L}]GKV{M(Oxidation (M))|F}VSA;{[VA]|[{I|L}G]}QVK{M(Oxidation (M))|F}VSA;{[VA]|[{I|L}G]}GAKV{M(Oxidation (M))|F}VSA;[TP]KAK{M(Oxidation (M))|F}VSA;[KA]{I|L}NV{M(Oxidation (M))|F}VSA;{[VA]|[{I|L}G]}AGVK{M(Oxidation (M))|F}VSA;{[QV]|[N{I|L}]|[RA]|[KV]}AVK{M(Oxidation (M))|F}VSA 4.434;4.1163;4.005;3.8872;3.7246;3.6668;3.5486;3.4532;3.4069;3.2957 -;-;-;-;-;-;-;+;-;- + 2881 1 1.231 195434.2 1.0 7345 4746 12081 HBL1_DMSO_200M_050219_2,12093 HBL1_DMSO_200M_050219_2,12093,KAINVFVSA True True KAINVFVSA 64.952686 474.779559314251 5624593.0 12081.0 ENSG00000114209|ENST00000392750|PDCD10 4.992386976877849 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12094 64.96 419.0 416090.0 25 0 38000.0 + 45173 YQLDPTASISA 11 157 583.2906569796755 1164.566761026151 2 583.2908203005791 MULTI CID FTMS 0 0 0 12081 267228.3125 0.2039568064946338 -2 0.1574325561523437 13 Unmodified _YQLDPTASISA_ ENSG00000165637|ENST00000332211|VDAC2;nc|ENSG00000165637|P45880-1|VDAC2;nc|ENSG00000165637|P45880-2|VDAC2 69.33821966488729 0.0343223916712224 4 [TP]ASY[TP]AS{I|L}SA 12 5 + 52.167 0.0 0.0 4.4795 4.4795 71.843 0.0 0.0 0.0 3.0782783459272167 5.986446888048107 3.0782783459272167 3.0782783459272167 0 1.1375918373824812 0.6575773191777937 2.3737125054200234 0.0 [TP]ASY[TP]AS{I|L}SA;{NN|[MP]|[D{I|L}]|[EV]}QY[TP]AS{I|L}SA;[YQ]{I|L}D[TP]AS{I|L}SA;[TP]ASYQ{I|L}D{I|L}SA;[TP]ASYA[TP]S{I|L}SA;{[TV]|[{I|L}S]}S[MT][TP]AS{I|L}SA;[Q{I|L}]DY[TP]AS{I|L}SA;{NN|[MP]|[D{I|L}]|[EV]}QYAVW{I|L}SA;[TP]ASYAVAD{I|L}SA;[TP]ASYAG{I|L}D{I|L}SA 4.4795;4.2152;4.0118;3.7387;3.6831;3.6151;3.615;3.5847;3.555;3.487 -;-;+;-;-;-;-;-;-;- + 4188 1 1.231 132781.1 1.0 7346 4746 12081 HBL1_DMSO_200M_050219_2,12094 HBL1_DMSO_200M_050219_2,12094,YQLDPTASISA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12095 64.97 467.0 405100.0 25 0 41385.0 + + 40337 DARLVLHV 8 138 461.7777029259556 921.5408529187112 2 461.7787658572197 MULTI CID FTMS 0 0 0 12081 274799.1875 1.0 0 0.0 14 Unmodified _VHLGVERI_ ENSG00000132004|ENST00000393261|FBXW9;nc|ENSG00000132004|Q5XUX1-2|FBXW9 10.823927491677226 0.7510103885582552 4 V{I|L}HV 4 -1 33.8 0.0 0.0 3.6678 0.0 0.0 455.2508106916032 0.0 455.2508106916032 0.0 21.03580915411396 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.0 V{I|L}HV 3.6678 - 217 1 1.231 145812.0 1.0 7347 4746 12081 HBL1_DMSO_200M_050219_2,12095 HBL1_DMSO_200M_050219_2,12095,VHLGVERI False False DARLVLHV 64.969611 461.77876585722 1498084.875 12081.0 ENSG00000132004|ENST00000393261|FBXW9;;nc|ENSG00000132004|Q5XUX1-2|FBXW9 0.6632942855358124 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12096 64.978 456.0 475290.0 25 0 83910.0 + 14856 ILGREATAVV 10 172 514.8083675322767 1027.6021821313534 2 514.8082153201103 MULTI CID FTMS 0 0 0 12081 259322.921875 0.398540448692981 -1 0.0773086547851562 15 Unmodified _ILGREATAVV_ REV__ENSG00000101146|ENST00000395841|RAE1 32.30548876998284 0.2428506522065767 4 {I|L}{I|L}[MN]Q{I|L}VVV 9 -1 + 54.301 0.0 0.0 5.2843 5.2843 72.299 0.0 0.0 0.0 4.637572931616809 14.973024840566469 4.637572931616809 1.7609125905568137 0 0.8807196863200843 0.958607314841775 0.0 0.3054621874040891 {I|L}{I|L}[MN]Q{I|L}VVV;{I|L}{I|L}R{[ES]|[DT]|[{I|L}C]}NVVV;{I|L}{I|L}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}NVVV;{I|L}{I|L}V[SG]ENVVV;{[VA]|[{I|L}G]}A{[ET]|[MV]}Q{I|L}VVV;VV{[WS]|[C(Carbamidomethyl (C)){I|L}]}Q{I|L}VVV;{I|L}{I|L}R{[ES]|[DT]|[{I|L}C]}VNVV;{[VA]|[{I|L}G]}{I|L}[VS]ENVVV;{I|L}{I|L}V[C(Carbamidomethyl (C))N]{I|L}VVV;{I|L}{I|L}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}VNVV 5.2843;5.1129;4.9913;4.9083;4.833;4.82;4.82;4.7772;4.6984;4.6984 -;-;-;-;-;-;-;-;-;- 3724 1 1.231 165693.7 1.0 7348 4746 12081 HBL1_DMSO_200M_050219_2,12096 HBL1_DMSO_200M_050219_2,12096,ILGREATAVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12097 64.986 461.0 551440.0 25 0 33092.0 + 39876 VFLERGEVM 9 225 540.281767668291 1078.5489824033818 2 540.2828857302666 MULTI CID FTMS 0 0 0 12081 239409.4375 0.416621366969745 -3 0.27044677734375 16 Unmodified _VFLERGEVM_ ENSG00000181222|ENST00000674977|POLR2A;nc|ENSG00000181222|P24928|POLR2A 30.7034409873982 0.1405282614900322 4 V{M(Oxidation (M))|F}{I|L}E[HN]AH{I|L} 9 5 + 49.515 0.0 0.0 4.5909 4.5909 67.888 0.0 0.0 0.0 20.33468718948261 1.5398434942549954 1.5398434942549954 0.9548395783933472 0 0.3807196863200844 1.5228787452803376 0.2396518287104437 0.0 V{M(Oxidation (M))|F}{I|L}E[HN]AH{I|L};V{M(Oxidation (M))|F}T{M(Oxidation (M))|F}RC(Carbamidomethyl (C))H{I|L};V{M(Oxidation (M))|F}{I|L}ETWWV;{M(Oxidation (M))|F}V{I|L}E[HN]AH{I|L};{M(Oxidation (M))|F}VT{M(Oxidation (M))|F}RC(Carbamidomethyl (C))H{I|L};V{M(Oxidation (M))|F}{I|L}EWWS{I|L};V{M(Oxidation (M))|F}{I|L}E[HN]HA{I|L};V{M(Oxidation (M))|F}T{M(Oxidation (M))|F}[Q{I|L}]{[HG]|PP}M;V{M(Oxidation (M))|F}T{M(Oxidation (M))|F}RW[HS];{M(Oxidation (M))|F}V{I|L}ETWWV 4.5909;4.5023;4.1151;3.9428;3.8543;3.7276;3.6109;3.5897;3.5017;3.467 -;-;-;-;-;-;-;-;-;- 2427 + 1 1.231 196962.6 1.0 7349 4746 12081 HBL1_DMSO_200M_050219_2,12097 HBL1_DMSO_200M_050219_2,12097,VFLERGEVM False True VFLERGEVM 64.985879 540.282885730267 6204999.5 12081.0 nc|ENSG00000181222|P24928|POLR2A;;ENSG00000181222|ENST00000674977|POLR2A 5.4803751309712725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12098 64.994 464.0 232190.0 25 0 13190.0 -1 TLSRVYHML 9 140 568.2990882343107 1134.583623535421 2 568.2995483279228 MULTI CID FTMS 0 0 0 12081 231896.46875 0.0198661391408222 13 -1.24847412109375 17 Oxidation (M) _TLSRVYHM(Oxidation (M))L_ ENSG00000161996|ENST00000293879|WDR90;ENST00000546516.5_1_16:705169-713132:+|nuORF;ENST00000547407.5_1_16:706354-706850:+|nuORF 18.13498045792455 0.3457906370836843 4 [{I|L}T]SCT[QA]VK 9 -1 18.883 0.0 0.0 1.6643 0.0 0.0 0.0 200.05703149935744 200.05703149935744 5.784270493654738 0.0 0.0 0.0 0 0.5 0.744727494896694 1.048455006504028 0.0 [{I|L}T]SCT[QA]VK 1.6643 - 1121 1 1.231 83919.9 1.0 7350 4746 12081 HBL1_DMSO_200M_050219_2,12098 HBL1_DMSO_200M_050219_2,12098,TLSRVYHML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12100 65.006 461.0 229160.0 25 0 16489.0 -1 0 103 867.3998639227552 1732.7851749123104 2 867.9019653201103 MULTI CID FTMS 0 0 0 12099 94320.890625 0.4091914693201823 1 -0.116546630859375 1 4 [MN][WH]WDQS 8 -1 33.906 0.0 0.0 1.9567 0.0 0.0 0.0 645.2916353815061 645.2916353815061 17.668884535972325 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.3807196863200844 0.3494850021680094 [MN][WH]WDQS 1.9567 - 477 + 1 1.216 78480.9 1.0 7351 4747 12099 HBL1_DMSO_200M_050219_2,12100 HBL1_DMSO_200M_050219_2,12100, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12101 65.007 8.8 3283700.0 25 0 313400.0 -1 LPQLMCPLL 9 54 522.2842687813646 1042.5539846295292 2 522.2845336794853 MULTI CID FTMS 0 0 0 12099 3698089.0 0.803171386415719 -1 0.0979537963867187 2 Oxidation (M) _LPQLM(Oxidation (M))CPLL_ ENST00000479118.1_1_X:122318417-122387488:+|nuORF 13.50788311687929 0.4710407108020397 4 {I|L} 1 -1 15.485 0.0 0.0 1.4853 0.0 0.0 911.4587678099964 0.0 911.4587678099964 0.0 6.532125137753438 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4853 + + 20 + 1 1.216 29559.9 1.0 7352 4747 12099 HBL1_DMSO_200M_050219_2,12101 HBL1_DMSO_200M_050219_2,12101,LPQLMCPLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12102 65.008 15.0 3330200.0 25 0 362480.0 + 3593 DAALDFKNV 9 76 496.75656257932326 991.4985722254464 2 496.7563354372978 MULTI CID FTMS 0 0 0 12099 3571881.0 0.8243756046853421 -1 0.0979537963867187 3 Unmodified _DAALDFKNV_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 47.74868867922204 0.0453060283459952 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}D{M(Oxidation (M))|F}KNV 8 2 + 50.378 0.0 0.0 5.081 5.081 83.619 0.0 0.0 0.0 15.579794439234227 7.051689394835705 7.051689394835705 11.658656145495245 0 0.9247425010840048 0.0 0.0 0.9896518287104438 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}D{M(Oxidation (M))|F}KNV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}D{M(Oxidation (M))|F}KGGV;[R{M(Oxidation (M))|F}]A{I|L}N{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;[R{M(Oxidation (M))|F}]A{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}NV;{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}{[RE]|[WV]};[R{M(Oxidation (M))|F}]A{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[NP];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ND{I|L}A{[RE]|[WV]};[R{M(Oxidation (M))|F}]A{I|L}GG{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DN{I|L}A{[RE]|[WV]};[R{M(Oxidation (M))|F}]A{I|L}N[VG]{[ES]|[DT]|[{I|L}C]} 5.081;3.9051;3.1031;3.0367;2.9122;2.2458;2.1834;2.1689;1.9383;1.9328 -;-;-;-;-;-;-;-;-;- 272 + 1 1.216 45707.0 1.0 7353 4747 12099 HBL1_DMSO_200M_050219_2,12102 HBL1_DMSO_200M_050219_2,12102,DAALDFKNV True True DAALDFKNV 65.007893 496.756335437298 64238448.0 12099.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 7.604812145233154 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12103 65.009 45.0 1136900.0 25 0 112730.0 + 35110 SQWDSPMRV 9 65 553.2582542611765 1104.5019555891529 2 553.2585327029228 MULTI CID FTMS 0 0 0 12099 1207825.25 0.4313460569069905 -2 0.175262451171875 4 Unmodified _SQWDSPMRV_ ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B 31.26834338654808 0.1333407332142048 4 {[QS]|[NT]}WDS[HK]{[MS]|[{M(Oxidation (M))|F}A]} 9 4 + 39.881 0.0 0.0 3.6108 3.6108 79.017 0.0 0.0 0.0 25.18832471365308 4.628618393527411 4.628618393527411 13.97817481888638 0 0.9247425010840048 0.0 0.0 0.75 {[QS]|[NT]}WDS[HK]{[MS]|[{M(Oxidation (M))|F}A]};{[QS]|[NT]}WDVWWV;{[QS]|[NT]}WVDWWV;{[QS]|[NT]}V{[C(Carbamidomethyl (C))E]|[WC]}[HK]{[MS]|[{M(Oxidation (M))|F}A]};{[QS]|[NT]}VWDWWV 3.6108;2.3452;2.0727;1.8011;1.6881 -;-;-;-;- 137 + 1 1.216 47663.6 1.0 7354 4747 12099 HBL1_DMSO_200M_050219_2,12103 HBL1_DMSO_200M_050219_2,12103,SQWDSPMRV False True SQWDSPMRV 65.009135 553.258532702923 48526572.0 12099.0 ENSG00000132549|ENST00000357162|VPS13B;;nc|ENSG00000132549|Q7Z7G8|VPS13B;;nc|ENSG00000132549|Q7Z7G8-6|VPS13B 6.643099149068196 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12104 65.011 88.0 1077300.0 25 0 83960.0 + 1980 ANIRLPPEV 9 101 504.7950065766392 1007.5754602200784 2 504.7957336306572 MULTI CID FTMS 0 0 0 12099 721448.625 1.0 0 0.0 5 Unmodified _ANIRLPPEV_ ENSG00000115128|ENST00000233468|SF3B6;ENST00000478050.1_1_2:24296944-24299099:-|nuORF 37.97399986684836 0.0865783450051559 4 [EP]V{I|L}{I|L}{I|L}PEV 9 5 + 37.615 0.0 0.0 3.7332 3.7332 79.206 0.0 0.0 0.0 10.118252904652469 11.26287494579977 10.118252904652469 13.138181262758266 0 1.0044321917401078 1.5228787452803376 0.0 0.0 [EP]V{I|L}{I|L}{I|L}PEV;[EP]V[QP]P{I|L}KT;[{I|L}P]D{I|L}{I|L}{I|L}PEV;{[QG]|[NA]}[R{I|L}]P{I|L}PEV;[EP]P{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}KT;[AG]G[R{I|L}]P{I|L}PEV;{NN|[MP]|[D{I|L}]|[EV]}P{I|L}{I|L}{I|L}PEV;[{I|L}P]D[QP]P{I|L}KT;{NN|[MP]|[D{I|L}]|[EV]}P[QP]P{I|L}KT 3.7332;2.4293;2.3344;2.1459;2.0065;1.7933;1.7482;1.0305;0.44431 -;-;-;-;-;-;-;-;- 161 1 1.216 79614.6 1.0 7355 4747 12099 HBL1_DMSO_200M_050219_2,12104 HBL1_DMSO_200M_050219_2,12104,ANIRLPPEV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12105 65.013 91.0 731950.0 25 0 56319.0 + 29638 QMVKELQEI 9 115 559.2988543244194 0 559.2982665896416 PEAK CID FTMS 0 0 0 12099 653168.5625 0.547561188894544 -1 0.0979537963867187 6 Unmodified _QMVKELQEI_ ENSG00000100906|ENST00000216797|NFKBIA;ENST00000555629.1_1_14:35872865-35873850:-|nuORF;ENST00000557100.5_1_14:35871861-35873850:-|nuORF;ENST00000557459.1_1_14:35872311-35873850:-|nuORF;NFKBIA|p.C215Vfs*23|1|0.14|ENSG00000100906|chr14:35402658-35402658|G/-|frameshift_variant 27.628801355627647 0.1319135480000405 4 EQ{I|L}NNE 6 8 28.722 0.0 0.0 2.5723 0.0 0.0 148.1175928267699 238.12061487369377 386.2382077004637 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.3054621874040891 EQ{I|L}NNE 2.5723 - 662 + 1 1.216 55659.8 1.0 7356 4747 12099 HBL1_DMSO_200M_050219_2,12105 HBL1_DMSO_200M_050219_2,12105,QMVKELQEI False True QMVKELQEI 65.013106 559.298266589642 7344753.0 12099.0 ENST00000557100.5_1_14:35871861-35873850:-|nuORF;;NFKBIA|p.C215Vfs*23|1|0.14|ENSG00000100906|chr14:35402658-35402658|G/-|frameshift_variant;;ENST00000555629.1_1_14:35872865-35873850:-|nuORF;;ENSG00000100906|ENST00000216797|NFKBIA;;ENST00000557459.1_1_14:35872311-35873850:-|nuORF 3.070267120997111 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12106 65.016 173.0 594700.0 25 0 61472.0 -1 0 95 366.20287997778576 365.19560351118577 1 366.2024413943291 MULTI CID FTMS 0 0 0 12099 411500.53125 1.0 0 0.0 7 4 AY{I|L} 3 -1 + 43.416 0.0 0.0 11.889 11.889 80.919 0.0 0.0 0.0 0.300084529637985 0.300084529637985 0.300084529637985 0.300084529637985 0 0.5 1.6989700043360187 0.0 0.0 AY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L};{M(Oxidation (M))|F}S{I|L};{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F} 11.889;11.806;8.4503;5.5361;4.9778 -;-;-;-;- 28 + 1 1.216 89486.8 1.0 7357 4747 12099 HBL1_DMSO_200M_050219_2,12106 HBL1_DMSO_200M_050219_2,12106, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12107 65.024 417.0 488450.0 25 0 92372.0 + 31020 RLFDRGDFYTA 11 106 680.8356647406745 1359.6567765481489 2 680.8369018435478 MULTI CID FTMS 0 0 0 12099 276937.65625 0.4463210364956637 -2 0.175262451171875 8 Unmodified _RLFDRGDFYTA_ ENSG00000095002|ENST00000233146|MSH2 34.67350252821523 0.2944480012833759 4 [YT]PVAR[DG][Y{M(Oxidation (M))|F}]TA 12 5 + 49.636 0.0 0.0 3.6506 3.6506 65.716 0.0 0.0 0.0 1.5490195998574308 14.22620816086787 1.5490195998574308 1.5490195998574308 0 0.9247425010840048 0.8538719643217619 0.3494850021680094 0.805462187404089 [YT]PVAR[DG][Y{M(Oxidation (M))|F}]TA;[{M(Oxidation (M))|F}T]{I|L}VAR[DG][Y{M(Oxidation (M))|F}]TA;[VG]{I|L}{[{M(Oxidation (M))|F}D]|MM}[C(Carbamidomethyl (C))H]AVP{M(Oxidation (M))|F}V 3.6506;3.5367;1.8472 -;-;- 332 1 1.216 147231.5 1.0 7358 4747 12099 HBL1_DMSO_200M_050219_2,12107 HBL1_DMSO_200M_050219_2,12107,RLFDRGDFYTA False True RLFDRGDFYTA 65.023927 680.836901843548 4961237.0 12099.0 ENSG00000095002|ENST00000233146|MSH2 6.685239791870117 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12108 65.034 587.0 302260.0 25 0 24343.0 15768 ISDSTRIFRL 10 167 403.23294451587816 0 403.2335388064384 PEAK CID FTMS 0 0 0 12099 214547.03125 0.829193908886445 1 -0.116546630859375 9 Unmodified _ISDSTRIFRL_ ENSG00000011566|ENST00000263881|MAP4K3;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;nc|ENSG00000011566|Q8IVH8-3|MAP4K3 10.315234532428624 0.3724224702302103 4 {I|L} 1 9 5.4846 0.0 0.0 0.68178 0.0 0.0 212.11764493904587 476.22749804800935 688.3451429870552 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.68178 + + 18 + 1 1.216 140614.0 1.0 7359 4747 12099 HBL1_DMSO_200M_050219_2,12108 HBL1_DMSO_200M_050219_2,12108,ISDSTRIFRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12109 65.044 557.0 250180.0 25 0 17990.0 21035 LPAAGLRSL 9 154 449.2791679936218 896.5437830540436 2 449.2786132693291 MULTI CID FTMS 0 0 0 12099 187043.671875 1.0 0 0.0 10 Unmodified _LPAAGLRSL_ ENST00000524486.5_1_11:799309-803120:-|nuORF;ENST00000527357.5_1_11:801679-803120:-|nuORF;ENST00000534525.5_1_11:799959-803120:-|nuORF 19.256988751693697 0.3154191944385105 4 [QP]{I|L}A{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 8 4 + 31.885 0.0 0.0 3.5565 3.5565 73.584 0.0 0.0 0.0 14.28788774999034 6.479400086720375 6.479400086720375 7.042425094393252 0 0.0 0.0 0.0 0.25 [QP]{I|L}A{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[QP]{I|L}AT[RV]{I|L};[QP]{I|L}AT[R{I|L}]V 3.5565;2.771;1.8513 -;-;- 174 + 1 1.216 111105.8 1.0 7360 4747 12099 HBL1_DMSO_200M_050219_2,12109 HBL1_DMSO_200M_050219_2,12109,LPAAGLRSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12110 65.054 546.0 202030.0 25 0 14774.0 + 27418 PIPPPWPL 8 151 458.77008561905177 915.5256183049036 2 458.7693359255791 MULTI CID FTMS 0 0 0 12099 176657.78125 1.0 0 0.0 11 Unmodified _PIPPPWPL_ REV__ENST00000545087.1_1:2143861-2144335:-|nuORF 17.086550045450526 0.6584923310065985 4 M 1 -1 14.604 0.0 0.0 1.5952 0.0 0.0 766.4740568808786 0.0 766.4740568808786 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.5952 - 262 + 1 1.216 89072.3 1.0 7361 4747 12099 HBL1_DMSO_200M_050219_2,12110 HBL1_DMSO_200M_050219_2,12110,PIPPPWPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12111 65.062 466.0 144420.0 25 0 12032.0 -1 0 77 603.9677535467044 1808.8814312403133 3 603.9673950076103 MULTI CID FTMS 0 0 0 12099 162892.09375 0.0558450400623616 16 -1.5056838989257812 12 4 {I|L}Q 2 -1 22.206 0.0 0.0 1.2276 0.0 0.0 1549.7276359295695 0.0 1549.7276359295695 0.0 7.769250191953674 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}Q 1.2276 - 176 + 1 1.216 56207.9 1.0 7362 4747 12099 HBL1_DMSO_200M_050219_2,12111 HBL1_DMSO_200M_050219_2,12111, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12112 65.072 518.0 68698.0 25 0 8087.3 -1 0 55 957.5474315022022 0 957.5461913943292 PEAK CID FTMS 0 0 0 12099 156050.1875 1.0 0 0.0 13 4 AA 2 -1 7.9588 0.0 0.0 0.41602 0.0 0.0 1073.6391612448356 694.3383272760374 1767.977488520873 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AA 0.41602 - 12 + 1 1.216 36966.3 1.0 7363 4747 12099 HBL1_DMSO_200M_050219_2,12112 HBL1_DMSO_200M_050219_2,12112, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12113 65.081 507.0 105150.0 25 0 8448.4 -1 0 78 692.0492210768114 0 692.0497314333916 PEAK CID FTMS 0 0 0 12099 145914.5625 0.7161320215167852 1 -0.116546630859375 14 4 V 1 -1 3.9794 0.0 0.0 0.28793 0.0 0.0 1136.9093114389757 143.08320032291252 1279.9925117618882 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.28793 - 13 + 1 1.216 45532.7 1.0 7364 4747 12099 HBL1_DMSO_200M_050219_2,12113 HBL1_DMSO_200M_050219_2,12113, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12114 65.091 545.0 74472.0 25 0 20383.0 + 43907 YFYINFFFKRT 11 64 773.4005004763603 0 773.4005004763603 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _YFYINFFFKRT_ REV__ENST00000226067.9_1_17:53342389-53342698:+|nuORF 2.498486711656943 0.4761840153648598 4 {M(Oxidation (M))|F}T 2 -1 5.9691 0.0 0.0 0.3864 0.0 0.0 757.3997425525268 536.2381075494749 1293.6378501020015 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}T 0.3864 - 33 + 1 1.216 37415.3 1.0 7365 4747 12099 HBL1_DMSO_200M_050219_2,12114 HBL1_DMSO_200M_050219_2,12114,YFYINFFFKRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12115 65.101 559.0 85109.0 25 0 12120.0 -1 0 67 921.4415480023224 1840.8685430714445 2 921.9435302615166 MULTI CID FTMS 0 0 0 12099 123735.2109375 1.0 0 0.0 16 4 [QP]SVG 5 -1 20.986 0.0 0.0 1.14 0.0 0.0 0.0 1369.611376893963 1369.611376893963 13.512196779647638 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 [QP]SVG 1.14 - 211 1 1.216 37699.4 1.0 7366 4747 12099 HBL1_DMSO_200M_050219_2,12115 HBL1_DMSO_200M_050219_2,12115, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12116 65.111 507.0 212280.0 25 0 12763.0 + 25095 MPYDSNRVVL 10 139 597.3038019683979 0 597.3043090701103 PEAK CID FTMS 0 0 0 12099 133271.6875 0.6942480070885122 1 -0.116546630859375 17 Unmodified _MPYDSNRVVL_ ENSG00000076201|ENST00000265562|PTPN23 23.78978130925829 0.2677467798970439 4 PYD 3 7 23.188 0.0 0.0 1.9443 0.0 0.0 131.03872227142853 683.3857765544875 814.4244988259161 0.0 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 + PYD 1.9443 + + 230 + 1 1.216 85487.6 1.0 7367 4747 12099 HBL1_DMSO_200M_050219_2,12116 HBL1_DMSO_200M_050219_2,12116,MPYDSNRVVL False True MPYDSNRVVL 65.110626 597.30430907011 3035408.75 12099.0 ENSG00000076201|ENST00000265562|PTPN23 1.8025647799173992 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12118 65.115 1.8 22335000.0 25 0 1852400.0 -1 SICMCSVSL 9 59 528.7276745207663 1055.4407961083325 2 528.7286865115166 MULTI CID FTMS 0 0 0 12117 16760654.0 0.2388202840904363 3 -0.28070068359375 1 2 Carbamidomethyl (C) _SIC(Carbamidomethyl (C))MC(Carbamidomethyl (C))SVSL_ ENST00000325722.7_1_1:35899174-35899423:-|nuORF 21.74664581756881 0.2544899275067181 4 S{I|L} 2 -1 24.949 0.0 0.0 2.3638 0.0 0.0 837.3136273845029 0.0 837.3136273845029 0.0 3.0102999566398125 0.0 0.0 0 0.4247425010840047 0.0 0.2742275032520141 0.0 S{I|L} 2.3638 + + 49 + 1 1.213 37215.7 1.0 7368 4748 12117 HBL1_DMSO_200M_050219_2,12118 HBL1_DMSO_200M_050219_2,12118,SICMCSVSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12119 65.116 13.0 3331400.0 25 0 438150.0 + 37355 RAIPELTKL 9 69 520.8266498655075 1039.638746797815 2 520.8273193240166 MULTI CID FTMS 0 0 0 12117 2848617.5 0.2215234194681853 3 -0.28070068359375 2 Unmodified _TKHSILTLK_ ENSG00000168036|ENST00000349496|CTNNB1 24.99096001346401 0.2132109383330889 4 {I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]TK{I|L} 8 7 + 26.107 0.0 0.0 2.5112 2.5112 78.35 0.0 0.0 0.0 2.836003313407076 2.836003313407076 2.836003313407076 26.107150328368576 0 1.0 0.0 0.0 0.2742275032520141 {I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]TK{I|L} 2.5112 - 36 + 1 1.213 41296.8 1.0 7369 4748 12117 HBL1_DMSO_200M_050219_2,12119 HBL1_DMSO_200M_050219_2,12119,TKHSILTLK False False RAIPELTKL 65.115982 520.827319324017 241432368.0 12117.0 ENSG00000168036|ENST00000349496|CTNNB1 4.646619955698649 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12120 65.117 2.3 20530000.0 25 0 1551200.0 + 31165 RLPEAIEEV 9 65 528.2902244617638 1054.5658959903276 2 528.2909423708916 MULTI CID FTMS 0 0 0 12117 16984776.0 0.9979141351275226 -1 0.116546630859375 3 Unmodified _RLPEAIEEV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 34.93206674587334 0.1032771302489716 4 A{I|L}EEV 5 4 48.073 0.0 0.0 4.5586 0.0 0.0 495.2807796244204 0.0 495.2807796244204 0.0 26.06659939437825 0.0 0.0 0 1.0114393726401687 0.0 0.0 0.0 + A{I|L}EEV 4.5586 + + 72 1 1.213 45301.4 1.0 7370 4748 12117 HBL1_DMSO_200M_050219_2,12120 HBL1_DMSO_200M_050219_2,12120,RLPEAIEEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12121 65.118 28.0 2242000.0 25 0 301060.0 + 32032 RVIGTLLGT 9 85 465.29247892118246 928.570404909165 2 465.2924072146416 MULTI CID FTMS 0 0 0 12117 2381936.25 1.0 0 0.0 4 Unmodified _RVIGTLLGT_ ENSG00000175390|ENST00000651655|EIF3F;ENST00000528653.1_1_11:8009127-8013479:+|nuORF 43.77239144664712 0.0547478964384323 4 {[SA]|[TG]}{I|L}[RV]{I|L}{I|L}GT 9 4 + 62.496 0.0 0.0 6.7303 6.7303 87.117 0.0 0.0 0.0 8.880262405560678 10.0 8.880262405560678 8.880262405560678 0 1.1549471895720984 0.4814860601221125 0.4247425010840047 0.0 {[SA]|[TG]}{I|L}[RV]{I|L}{I|L}GT;[{I|L}A]S[RV]{I|L}{I|L}GT;[RV]{[TV]|[{I|L}S]}A{I|L}{I|L}GT;{[VA]|[{I|L}G]}T[RV]{I|L}{I|L}GT 6.7303;5.774;5.5502;5.2393 -;-;-;- 146 1 1.213 52836.3 1.0 7371 4748 12117 HBL1_DMSO_200M_050219_2,12121 HBL1_DMSO_200M_050219_2,12121,RVIGTLLGT True True RVIGTLLGT 65.118341 465.292407214642 17117620.0 12117.0 ENST00000528653.1_1_11:8009127-8013479:+|nuORF;;ENSG00000175390|ENST00000651655|EIF3F 3.611677885055542 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12122 65.12 46.0 1180500.0 25 0 196040.0 + 11388 GGIDRVYEI 9 75 511.2693906317742 1020.5242283303484 2 511.2696411013603 MULTI CID FTMS 0 0 0 12117 1704421.625 0.8273217678511859 1 -0.0590133666992187 5 Unmodified _GGIDRVYEI_ ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1 24.99096001346401 0.2132109383330889 4 [YV][HV]VYE{I|L} 8 5 + 46.52 0.0 0.0 4.5585 4.5585 76.927 0.0 0.0 0.0 6.989700043360188 16.409780573583323 6.989700043360188 6.989700043360188 0 0.7134679910804405 1.3010299956639813 0.0 0.0 [YV][HV]VYE{I|L};{[QN]|[E{I|L}]|[KN]}QQVYE{I|L};[{I|L}P][C(Carbamidomethyl (C))K]VYE{I|L};[YV][HV][Y{I|L}]D{I|L};{[QN]|[E{I|L}]|[KN]}QQ[Y{I|L}]D{I|L};[{I|L}P][C(Carbamidomethyl (C))K][Y{I|L}]D{I|L} 4.5585;3.8735;2.782;2.3432;1.6583;0.56677 -;-;-;-;-;- 121 1 1.213 48432.5 1.0 7372 4748 12117 HBL1_DMSO_200M_050219_2,12122 HBL1_DMSO_200M_050219_2,12122,GGIDRVYEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12123 65.121 16.0 1982800.0 25 0 159790.0 + 2449 AQVALVNEV 9 68 471.7682185102676 941.5218840873353 2 471.7665893435478 MULTI CID FTMS 0 0 0 12117 1481797.0 1.0 0 0.0 6 Unmodified _AQVALVNEV_ ENSG00000086758|ENST00000262854|HUWE1;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 15.847184025352805 0.4077185912009129 4 [{I|L}A]NA{I|L} 5 6 34.437 0.0 0.0 3.6576 0.0 0.0 0.0 456.21241078094766 456.21241078094766 20.457574905606748 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]NA{I|L} 3.6576 - 95 1 1.213 30642.6 1.0 7373 4748 12117 HBL1_DMSO_200M_050219_2,12123 HBL1_DMSO_200M_050219_2,12123,AQVALVNEV False True AQVALVNEV 65.120782 471.766589343548 15945737.0 12117.0 ENSG00000086758|ENST00000262854|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 2.455859581629435 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12124 65.122 27.0 1521200.0 25 0 256210.0 + 20048 LIPQRYAP 8 74 479.27739840107984 956.5402438689596 2 479.2768432497978 MULTI CID FTMS 0 0 0 12117 1520911.75 0.8974811020509533 1 -0.0590133666992187 7 Unmodified _LIPQRYAP_ REV__ENSG00000117394|ENST00000426263|SLC2A1 2.889219685676258 0.8067950007271085 4 {I|L} 1 -1 9.7539 0.0 0.0 1.0197 0.0 0.0 825.4452254136847 0.0 825.4452254136847 0.0 9.75390988664909 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0197 + + 6 + 1 1.213 40538.3 1.0 7374 4748 12117 HBL1_DMSO_200M_050219_2,12124 HBL1_DMSO_200M_050219_2,12124,LIPQRYAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12125 65.123 41.0 1388300.0 25 0 158250.0 27554 PLAFFGFL 8 84 456.2566666684605 910.4987804037212 2 456.2565795779228 MULTI CID FTMS 0 0 0 12117 1409729.375 0.7259563978209145 1 -0.0590133666992187 8 Unmodified _PLAFFGFL_ ENSG00000169903|ENST00000305354|TM4SF4 11.114462752807354 0.7467182956244686 4 P{I|L}A 3 5 13.188 0.0 0.0 1.4484 0.0 0.0 98.98080433216587 527.3201387994749 626.3009431316408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P{I|L}A 1.4484 + + 21 + 1 1.213 51926.7 1.0 7375 4748 12117 HBL1_DMSO_200M_050219_2,12125 HBL1_DMSO_200M_050219_2,12125,PLAFFGFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12126 65.124 21.0 2515200.0 25 0 176830.0 + 12038 GQDEPLIHV 9 90 504.262544569836 1006.510536206472 2 504.2602111697197 MULTI CID FTMS 0 0 0 12117 1178096.375 0.4373554835640368 -2 0.2145004272460937 9 Unmodified _GQDEPLIHV_ ENSG00000157778|ENST00000288607|PSMG3 44.40701690623563 0.0526327925666318 4 SP{I|L}{I|L}HV 6 4 27.344 0.0 0.0 2.7167 0.0 0.0 342.10766008636125 0.0 342.10766008636125 0.0 6.134125487802109 0.0 0.0 0 0.0 0.0 0.0 0.0 SP{I|L}{I|L}HV 2.7167 - 210 + 1 1.213 48684.7 1.0 7376 4748 12117 HBL1_DMSO_200M_050219_2,12126 HBL1_DMSO_200M_050219_2,12126,GQDEPLIHV True True GQDEPLIHV 65.124318 504.26021116972 36432092.0 12117.0 ENSG00000157778|ENST00000288607|PSMG3 6.978585084279378 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12127 65.126 45.0 890640.0 25 0 113190.0 + 26225 NQIPTVNNL 9 66 506.77535457420544 1011.5361562152108 2 506.7751342654228 MULTI CID FTMS 0 0 0 12117 1136580.875 0.8676748740973298 -2 0.2145004272460937 10 Unmodified _NQIPTVNNL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 30.63653989081413 0.1413794767160703 4 {[QN]|[E{I|L}]|[KN]}{I|L}[NG]{I|L} 6 4 27.918 0.0 0.0 2.76 0.0 0.0 0.0 369.1883528306984 369.1883528306984 12.70181229336984 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.75 {[QN]|[E{I|L}]|[KN]}{I|L}[NG]{I|L} 2.76 - 120 1 1.213 36401.1 1.0 7377 4748 12117 HBL1_DMSO_200M_050219_2,12127 HBL1_DMSO_200M_050219_2,12127,NQIPTVNNL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12128 65.128 89.0 1149500.0 25 0 285020.0 -1 0 97 324.21598820278143 646.4174234723629 2 324.2155029177666 MULTI CID FTMS 0 0 0 12117 1095868.25 0.5937530455682364 1 -0.0590133666992187 11 4 {M(Oxidation (M))|F}{I|L}RV{I|L} 5 -1 + 45.118 0.0 0.0 6.9797 6.9797 90.731 0.0 0.0 0.0 16.020599913279625 10.260394762458134 10.260394762458134 10.260394762458134 0 1.0138793319624575 0.0 0.0 0.3252574989159953 {M(Oxidation (M))|F}{I|L}RV{I|L};{M(Oxidation (M))|F}{I|L}{I|L}[RV];[R{I|L}]{M(Oxidation (M))|F}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RV{I|L};[R{I|L}]V{M(Oxidation (M))|F}{I|L};[RV]{I|L}{M(Oxidation (M))|F}{I|L} 6.9797;5.3924;3.7879;3.6688;2.1116;1.283 -;-;-;-;-;- 36 + 1 1.213 85871.3 1.0 7378 4748 12117 HBL1_DMSO_200M_050219_2,12128 HBL1_DMSO_200M_050219_2,12128, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12129 65.129 31.0 1372400.0 25 0 106220.0 + 22359 LPSPLKQTI 9 86 498.8081792005347 995.6018054678694 2 498.8082458376884 MULTI CID FTMS 0 0 0 12117 1031319.0625 0.0038925289287342 21 -1.906585693359375 12 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 26.268140514670165 0.1969607489560049 4 {I|L}PS 3 6 51.995 0.0 0.0 5.2224 0.0 0.0 0.0 695.4113440465507 695.4113440465507 31.984615597275408 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 + {I|L}PS 5.2224 + + 247 + 1 1.213 39192.1 1.0 7379 4748 12117 HBL1_DMSO_200M_050219_2,12129 HBL1_DMSO_200M_050219_2,12129,LPSPLKQTI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12130 65.131 109.0 892760.0 25 0 89045.0 + 1942 AMKVPLSL 8 102 429.7594294671788 857.5043060011576 2 429.7595703005791 MULTI CID FTMS 0 0 0 12117 910729.0 0.1573373637043917 4 -0.4128570556640625 13 Unmodified _AMKVPLSL_ REV__ENST00000480436.5_1_20:13415759-13610725:-|nuORF;REV__nc|ENSG00000089123|Q9H6P5-3|TASP1 24.67388899826682 0.525179942228231 4 {[DS]|[MA]|[CV]|TT}P 3 -1 32.76 0.0 0.0 3.8203 0.0 0.0 0.0 555.3526705377561 555.3526705377561 13.309159218443796 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}P 3.8203 - 82 + 1 1.213 81181.4 1.0 7380 4748 12117 HBL1_DMSO_200M_050219_2,12130 HBL1_DMSO_200M_050219_2,12130,AMKVPLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12131 65.133 80.0 952120.0 25 0 64618.0 + 41066 VMPEAVPEV 9 93 485.7493187319013 969.4840845306028 2 485.7495300173759 MULTI CID FTMS 0 0 0 12117 828075.125 0.903749086135272 1 -0.0590133666992187 14 Unmodified _VMPEAVPEV_ ENSG00000101191|ENST00000395343|DIDO1;nc|ENSG00000101191|Q9BTC0-1|DIDO1 28.486842064014134 0.1687311288560894 4 [EP]AVMV 6 4 44.385 0.0 0.0 4.5783 0.0 0.0 0.0 340.1509676319038 340.1509676319038 27.56289394320262 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 [EP]AVMV 4.5783 - 321 1 1.213 62350.4 1.0 7381 4748 12117 HBL1_DMSO_200M_050219_2,12131 HBL1_DMSO_200M_050219_2,12131,VMPEAVPEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12132 65.139 323.0 330850.0 25 0 34028.0 + 17053 KLADDVDLEQV 11 127 622.8216792857355 1243.628805638271 2 623.3232299685478 MULTI CID FTMS 0 0 0 12117 554712.5625 0.5654246022680434 1 -0.0590133666992187 15 Unmodified _KLADDVDLEQV_ ENSG00000165280|ENST00000358901|VCP;ENST00000480327.1_1_9:35060776-35061606:-|nuORF;ENST00000493886.5_1_9:35057116-35062147:-|nuORF 42.312485326615175 0.1767732348921932 4 {NN|[MP]|[D{I|L}]|[EV]}AKDVD{I|L}EQV 11 2 + 67.982 0.0 0.0 5.4664 5.4664 79.069 0.0 0.0 0.0 5.606673061697372 2.5128137163401902 2.5128137163401902 5.4722877531575165 0 0.5484550065040282 0.958607314841775 1.4731975075880328 0.0 {NN|[MP]|[D{I|L}]|[EV]}AKDVD{I|L}EQV;{NN|[MP]|[D{I|L}]|[EV]}E[KG]VD{I|L}EQV;{[QN]|[E{I|L}]|[KN]}GKDVD{I|L}EQV;[AG]V{[TV]|[{I|L}S]}DVD{I|L}EQV;{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}DVD{I|L}EQV;{NN|[MP]|[D{I|L}]|[EV]}AA[TA]VD{I|L}EQV;{[QN]|[E{I|L}]|[KN]}D[KG]VD{I|L}EQV;{NN|[MP]|[D{I|L}]|[EV]}AKDV[QT]QQV;{[QN]|[E{I|L}]|[KN]}Q[TA]VD{I|L}EQV;{NN|[MP]|[D{I|L}]|[EV]}E[RK]D{I|L}EQV 5.4664;5.0264;5.0156;4.8351;4.6935;4.5908;4.5756;4.4039;4.2341;4.2166 -;-;-;-;-;-;-;-;-;- 3167 1 1.213 87060.0 1.0 7382 4748 12117 HBL1_DMSO_200M_050219_2,12132 HBL1_DMSO_200M_050219_2,12132,KLADDVDLEQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12133 65.145 375.0 421060.0 25 0 36510.0 + 13676 HQDPQSIFV 9 178 535.7666865115796 1069.518820089959 2 535.7668334841728 MULTI CID FTMS 0 0 0 12117 443298.21875 0.4429074636402034 3 -0.28070068359375 16 Unmodified _HQDPQSIFV_ ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1 34.40172386719151 0.1061884637610825 4 N{M(Oxidation (M))|F}[QP]S{I|L}{M(Oxidation (M))|F}V 8 3 35.227 0.0 0.0 3.2937 0.0 0.0 119.0740452497086 0.0 119.0740452497086 0.0 12.039106406846043 0.0 0.0 0 0.6989700043360187 0.0 0.9247425010840048 0.2614393726401688 N{M(Oxidation (M))|F}[QP]S{I|L}{M(Oxidation (M))|F}V 3.2937 - 640 1 1.213 122971.1 1.0 7383 4748 12117 HBL1_DMSO_200M_050219_2,12133 HBL1_DMSO_200M_050219_2,12133,HQDPQSIFV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12134 65.148 142.0 659970.0 25 0 79402.0 + 22428 LPTHLSAEI 9 123 490.7740938546011 979.5336347760024 2 490.7737304568291 MULTI CID FTMS 0 0 0 12117 399479.53125 0.7844534879132805 -1 0.116546630859375 17 Unmodified _LPTHLSAEI_ ENSG00000130119|ENST00000360845|GNL3L 39.957323273325 0.0756908302845263 4 {[QN]|[E{I|L}]|[KN]}HRA{I|L}E{I|L} 8 5 + 46.329 0.0 0.0 4.7296 4.7296 67.13 0.0 0.0 0.0 3.460156505745005 11.723768538953712 3.460156505745005 0.3171830909637521 0 0.2887254899964357 0.0 1.0356668758921828 0.0 {[QN]|[E{I|L}]|[KN]}HRA{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}HRAE{I|L}{I|L};[{M(Oxidation (M))|F}T]S{I|L}SA{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}HR{I|L}AE{I|L};[{M(Oxidation (M))|F}T]S{I|L}SAE{I|L}{I|L};[{I|L}P]NYT{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P][HT]SA{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}H[VG]A{I|L}E{I|L};[{M(Oxidation (M))|F}T]S{I|L}S{I|L}AE{I|L};{[QN]|[E{I|L}]|[KN]}H[VG]AE{I|L}{I|L} 4.7296;4.6973;4.3764;4.1163;4.0322;3.9657;3.9328;3.7841;3.763;3.7517 -;-;-;-;-;-;-;-;-;- 1156 1 1.213 73281.2 1.0 7384 4748 12117 HBL1_DMSO_200M_050219_2,12134 HBL1_DMSO_200M_050219_2,12134,LPTHLSAEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12135 65.155 389.0 394090.0 25 0 27688.0 + -1 VLTSMKEMAAP 11 161 605.2975224586991 0 605.2980834841728 PEAK CID FTMS 0 0 0 12117 350410.3125 0.6583132557848174 -1 0.116546630859375 18 2 Oxidation (M) _VLTSM(Oxidation (M))KEM(Oxidation (M))AAP_ REV__ENST00000555044.5_2_14:74364914-74371672:+|nuORF 18.1463463914782 0.3750318954284983 4 SVPSD{I|L} 6 -1 34.302 0.0 0.0 2.8382 0.0 0.0 215.05822743517305 392.20810877017817 607.2663362053512 0.0 0.0 0.0 0.0 0 0.0 0.0 1.079689690656103 0.0 SVPSD{I|L} 2.8382 - 1033 + 1 1.213 113499.5 1.0 7385 4748 12117 HBL1_DMSO_200M_050219_2,12135 HBL1_DMSO_200M_050219_2,12135,VLTSMKEMAAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12136 65.162 391.0 450090.0 25 0 20947.0 + 13132 HFHWTSQSF 9 156 588.7647999828355 1175.5150470324709 2 588.7646362185478 MULTI CID FTMS 0 0 0 12117 351869.3125 0.328812718097467 -2 0.2145004272460937 19 Unmodified _HFHWTSQSF_ ENST00000507823.5_1_5:174919150-174919204:+|nuORF 103.74828524460852 0.0090107942103208 4 {[{M(Oxidation (M))|F}H]|[RQ]}HWTSQS{M(Oxidation (M))|F} 9 0 + 85.136 0.0 0.0 7.2424 7.2424 79.666 0.0 0.0 0.0 3.992788557843284 14.973024840566469 3.992788557843284 1.7609125905568137 0 1.5356668758921828 1.3979400086720375 1.924742501084005 0.0 + + {[{M(Oxidation (M))|F}H]|[RQ]}HWTSQS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}WHTSQS{M(Oxidation (M))|F};{[QS]|[NT]}ST{[SA]|[TG]}{M(Oxidation (M))|F}SQS{M(Oxidation (M))|F};{[QS]|[NT]}S[PA]HTSQS{M(Oxidation (M))|F};{[QS]|[NT]}ST{[MS]|[{M(Oxidation (M))|F}A]}SSQS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}HWTS[AG]S{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}WTHSQS{M(Oxidation (M))|F};{[QS]|[NT]}SAAYTSQS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}WHTS[AG]S{M(Oxidation (M))|F};{[QS]|[NT]}ST{[SA]|[TG]}{M(Oxidation (M))|F}S[AG]S{M(Oxidation (M))|F} 7.2424;7.0926;6.9028;6.862;6.8354;6.4591;6.4307;6.4172;6.3093;6.1262 +;-;-;-;-;-;-;-;-;- + 8655 1 1.213 134592.9 1.0 7386 4748 12117 HBL1_DMSO_200M_050219_2,12136 HBL1_DMSO_200M_050219_2,12136,HFHWTSQSF True True HFHWTSQSF 65.162272 588.764636218548 8111802.0 12117.0 ENST00000507823.5_1_5:174919150-174919204:+|nuORF 8.846127192179361 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12137 65.17 409.0 281970.0 25 0 20812.0 + -1 VPLDGRPMNI 10 135 564.2973087569122 1126.5800645806244 2 564.2978393435478 MULTI CID FTMS 0 0 0 12117 317230.59375 0.5279303800707196 4 -0.4128570556640625 20 Oxidation (M) _VPLDGRPM(Oxidation (M))NI_ nc|ENSG00000183684|Q86V81|ALYREF;ENSG00000183684|ENST00000505490|ALYREF 27.22323531849824 0.3570408936368626 4 VP{I|L}DNV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]P 9 -1 61.287 0.0 0.0 5.4401 0.0 0.0 0.0 82.06696497134999 82.06696497134999 26.09604846242681 0.0 0.0 0.0 0 1.3996498648046138 1.3979400086720375 0.0 0.0 VP{I|L}DNV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]P 5.4401 - 734 + 1 1.213 97220.7 1.0 7387 4748 12117 HBL1_DMSO_200M_050219_2,12137 HBL1_DMSO_200M_050219_2,12137,VPLDGRPMNI False False VPLDGRPMNI 65.169591 564.297839343548 28085442.0 12117.0 nc|ENSG00000183684|Q86V81|ALYREF;;ENSG00000183684|ENST00000505490|ALYREF 7.336633523305257 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12139 65.174 7.0 7454400.0 25 0 840850.0 + 30034 QTPQRLLEV 9 76 542.3117340738437 1082.6089152144873 2 542.3118163943291 MULTI CID FTMS 0 0 0 12138 8246603.0 1.0 0 0.0 1 Unmodified _QTPQRLLEV_ ENSG00000133119|ENST00000380071|RFC3;nc|ENSG00000133119|P40938-2|RFC3 41.8396318013385 0.0653578398400075 4 [NP]VVVV{M(Oxidation (M))|F}V[NP] 10 9 + 26.985 0.0 0.0 2.4926 2.4926 77.399 0.0 0.0 0.0 3.128552861292277 7.87279024905537 3.128552861292277 18.010299956639813 0 0.3054621874040891 2.0 0.0 0.3807196863200844 [NP]VVVV{M(Oxidation (M))|F}V[NP];[PS][KP]VV{M(Oxidation (M))|F}V[NP] 2.4926;0.829 -;- 60 1 1.213 46354.5 1.0 7388 4749 12138 HBL1_DMSO_200M_050219_2,12139 HBL1_DMSO_200M_050219_2,12139,QTPQRLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12140 65.175 7.3 9969400.0 25 0 1884300.0 + 44613 YPFKPPKI 8 76 330.5324354067559 988.5754768204677 3 330.5320617556572 MULTI CID FTMS 0 0 0 12138 6847956.0 0.6270492546325301 -5 0.4309463500976562 2 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 28.486842064014134 0.4448922141344407 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 54.388 0.0 0.0 5.5017 5.5017 85.609 0.0 0.0 0.0 19.773955376926423 7.166987712964499 7.166987712964499 12.09544243948811 0 0.2887254899964357 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 5.5017;4.2782 +;- + 152 + 1 1.213 65379.5 1.0 7389 4749 12138 HBL1_DMSO_200M_050219_2,12140 HBL1_DMSO_200M_050219_2,12140,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12141 65.176 12.0 4264900.0 25 0 992300.0 + 37821 TLTEEGVIKV 10 75 544.8135257369634 1087.6124985407266 2 544.8137695193291 MULTI CID FTMS 0 0 0 12138 4242468.0 0.6396345107622239 -1 0.0590133666992187 3 Unmodified _TLTEEGVIKV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 24.95707706330732 0.4079579053029958 4 [{I|L}T]TEER{I|L} 7 4 69.226 0.0 0.0 6.365 0.0 0.0 0.0 242.1514834039672 242.1514834039672 42.367807219767215 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.75 0.0 [{I|L}T]TEER{I|L} 6.365 - 145 + 1 1.213 43340.9 1.0 7390 4749 12138 HBL1_DMSO_200M_050219_2,12141 HBL1_DMSO_200M_050219_2,12141,TLTEEGVIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12142 65.177 16.0 2726900.0 25 0 478420.0 + 39181 TYQAMVHEL 9 76 546.2629118192945 1090.5112707053888 2 546.2633544802666 MULTI CID FTMS 0 0 0 12138 2762532.5 0.7747287709987588 2 -0.2216873168945312 4 Unmodified _TYQAMVHEL_ ENSG00000136631|ENST00000644510|VPS45;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;nc|ENSG00000136631|Q9NRW7-2|VPS45 30.63653989081413 0.1413794767160703 4 [YT]QAMV 6 3 51.203 0.0 0.0 4.6953 0.0 0.0 0.0 394.1734311763428 394.1734311763428 39.599009323677095 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.5 + [YT]QAMV 4.6953 + + 195 + 1 1.213 37714.0 1.0 7391 4749 12138 HBL1_DMSO_200M_050219_2,12142 HBL1_DMSO_200M_050219_2,12142,TYQAMVHEL False True TYQAMVHEL 65.177353 546.262 58252060.0 12138.0 ENSG00000136631|ENST00000644510|VPS45;;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;;nc|ENSG00000136631|Q9NRW7-2|VPS45 9.909883181254068 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12143 65.179 23.0 1892300.0 25 0 213720.0 + 41404 VPLDGRPMNI 10 42 556.2999846710574 1110.5854164089146 2 556.3003417849541 MULTI CID FTMS 0 0 0 12138 2242230.75 0.2748130694361672 4 -0.4362564086914062 5 Unmodified _VPLDGRPMNI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 19.361941925380144 0.5226674314761524 4 VP{I|L}D 4 6 50.165 0.0 0.0 4.517 0.0 0.0 0.0 683.3309069409496 683.3309069409496 21.74865027867405 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 + VP{I|L}D 4.517 + + 47 + 1 1.213 41374.4 1.0 7392 4749 12138 HBL1_DMSO_200M_050219_2,12143 HBL1_DMSO_200M_050219_2,12143,VPLDGRPMNI False True VPLDGRPMNI 65.178532 556.300341784954 599771240.0 12138.0 nc|ENSG00000183684|Q86V81|ALYREF;;ENSG00000183684|ENST00000505490|ALYREF 7.543686866760254 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12144 65.18 28.0 1569800.0 25 0 233300.0 + 19818 LGYDTRVTI 9 69 519.2849509744356 1036.555349015671 2 519.2852050662041 MULTI CID FTMS 0 0 0 12138 1413427.125 0.517029756898437 2 -0.2216873168945312 6 Unmodified _LGYDTRVTI_ ENSG00000067057|ENST00000381125|PFKP;nc|ENSG00000067057|Q01813-2|PFKP 21.53697664764585 0.2571576504437394 4 {I|L}GYD 4 5 51.414 0.0 0.0 4.9601 0.0 0.0 0.0 585.3372461215693 585.3372461215693 38.65020288051564 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 + {I|L}GYD 4.9601 + + 16 + 1 1.213 40736.1 1.0 7393 4749 12138 HBL1_DMSO_200M_050219_2,12144 HBL1_DMSO_200M_050219_2,12144,LGYDTRVTI False True LGYDTRVTI 65.179711 519.285205066204 20802336.0 12138.0 nc|ENSG00000067057|Q01813-2|PFKP;;ENSG00000067057|ENST00000381125|PFKP 3.188352664311727 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12145 65.181 76.0 893520.0 25 0 91157.0 + 10919 GAIVGAIKVTH 11 85 533.3244777504736 1064.6344025677472 2 533.3242675662041 MULTI CID FTMS 0 0 0 12138 564580.0625 1.0 0 0.0 7 Unmodified _GAIVGAIKVTH_ REV__ENSG00000173482|ENST00000580170|PTPRM;REV__ENST00000577827.5_1_18:8122082-8296373:+|nuORF;REV__nc|ENSG00000173482|P28827|PTPRM 9.38312468134398 0.8308777417566128 4 QQP 3 -1 21.311 0.0 0.0 2.0017 0.0 0.0 0.0 708.4430025690061 708.4430025690061 9.321355998091434 0.0 0.0 0.0 0 0.2614393726401688 0.8239087409443188 0.0 0.0 QQP 2.0017 - 29 + 1 1.213 57435.1 1.0 7394 4749 12138 HBL1_DMSO_200M_050219_2,12145 HBL1_DMSO_200M_050219_2,12145,GAIVGAIKVTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12146 65.188 381.0 347800.0 25 0 34426.0 + 10827 FYYGGVSSASY 11 132 600.7638246560207 1199.5130963788413 2 600.7643310427666 MULTI CID FTMS 0 0 0 12138 465504.46875 0.5603908237034014 -1 0.0590133666992187 8 Unmodified _FYYGGVSSASY_ ENSG00000065328|ENST00000378714|MCM10;nc|ENSG00000065328|Q7L590|MCM10 54.773552608820026 0.091194150160751 4 YRASY 5 7 33.223 0.0 0.0 2.7697 0.0 0.0 541.2018914001288 0.0 541.2018914001288 0.0 17.394882406428373 0.0 0.0 0 0.0 0.0 0.5941876774005248 0.555462187404089 YRASY 2.7697 - 2420 + 1 1.213 97971.0 1.0 7395 4749 12138 HBL1_DMSO_200M_050219_2,12146 HBL1_DMSO_200M_050219_2,12146,FYYGGVSSASY True True FYYGGVSSASY 65.188324 600.764331042767 5689602.5 12138.0 ENSG00000065328|ENST00000378714|MCM10;;nc|ENSG00000065328|Q7L590|MCM10 6.031636397043864 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12147 65.191 147.0 662820.0 25 0 182770.0 + 31104 RLLGEEVVRV 10 65 585.3539419918111 1168.693331050422 2 585.3541137576103 MULTI CID FTMS 0 0 0 12138 394527.59375 1.0 0 0.0 9 Unmodified _RLLGEEVVRV_ ENSG00000100726|ENST00000262319|TELO2 14.95716135407024 0.5965753712453801 4 VG{I|L}{I|L}WEV 7 7 39.385 0.0 0.0 3.37 0.0 0.0 0.0 369.2245577447876 369.2245577447876 28.415922783183944 0.0 0.0 0.0 0 1.242992819099939 1.6989700043360187 0.0 0.0 VG{I|L}{I|L}WEV 3.37 - 30 + 1 1.213 78068.8 1.0 7396 4749 12138 HBL1_DMSO_200M_050219_2,12147 HBL1_DMSO_200M_050219_2,12147,RLLGEEVVRV False True RLLGEEVVRV 65.191269 585.354 3126043.0 12138.0 ENSG00000100726|ENST00000262319|TELO2 5.70740286509196 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12148 65.195 190.0 565920.0 25 0 64265.0 15007 ILSGQGHR 8 126 434.2431596063684 866.4717662795367 2 434.2433959841728 MULTI CID FTMS 0 0 0 12138 383393.125 0.7473459144016277 2 -0.2216873168945312 10 Unmodified _ILSGQGHR_ ENST00000527061.1_1_11:66176857-66177398:+|nuORF 5.760428011301431 0.7893668129297577 4 {I|L}{I|L}[R{M(Oxidation (M))|F}]{I|L} 5 6 16.478 0.0 0.0 1.9018 0.0 0.0 0.0 221.04150439893047 221.04150439893047 6.099571249195783 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}[R{M(Oxidation (M))|F}]{I|L} 1.9018 - 42 1 1.213 87781.7 1.0 7397 4749 12138 HBL1_DMSO_200M_050219_2,12148 HBL1_DMSO_200M_050219_2,12148,ILSGQGHR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12149 65.205 593.0 335900.0 25 0 46440.0 + + 23727 KAVVLTLA 8 153 407.773575991309 813.5325990494181 2 407.7737304568291 MULTI CID FTMS 0 0 0 12138 281274.21875 1.0 0 0.0 11 Unmodified _LTVKLGIA_ ENSG00000110244|ENST00000357780|APOA4;P15497 40.44857923139169 0.2267865117615937 4 PSK{I|L}TA{I|L} 7 -1 27.55 0.0 0.0 3.3864 0.0 0.0 85.08992201972812 0.0 85.08992201972812 0.0 11.35161788919579 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.0 PSK{I|L}TA{I|L} 3.3864 - 235 1 1.213 157608.7 1.0 7398 4749 12138 HBL1_DMSO_200M_050219_2,12149 HBL1_DMSO_200M_050219_2,12149,LTVKLGIA False False KAVVLTLA 65.205293 407.773730456829 1502050.0 12138.0 ENSG00000110244|ENST00000357780|APOA4;;P15497 1.1080270012219746 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12150 65.215 559.0 455800.0 25 0 53014.0 -1 0 119 964.4447607727724 2890.312452918517 3 964.7789184451104 MULTI CID FTMS 0 0 0 12138 243521.078125 0.290247734349172 6 -0.6432113647460938 12 4 [NP]VSYVSS{I|L} 9 -1 66.244 0.0 0.0 2.2919 0.0 0.0 0.0 1940.81303820588 1940.81303820588 21.678826666315224 0.0 0.0 0.0 0 0.0 0.0 2.3169015600442577 1.9876954943324543 [NP]VSYVSS{I|L} 2.2919 - 9448 1 1.213 171375.4 1.0 7399 4749 12138 HBL1_DMSO_200M_050219_2,12150 HBL1_DMSO_200M_050219_2,12150, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12151 65.226 600.0 178890.0 25 0 11611.0 + 19780 LGRWAPSL 8 167 450.2569490072247 898.4993450812493 2 450.2568542361259 MULTI CID FTMS 0 0 0 12138 251495.15625 1.0 0 0.0 13 Unmodified _LGRWAPSL_ REV__ENST00000344458.6_1_2:220414612-220414897:+|nuORF 10.183394434864962 0.7604730176254005 4 {[VA]|[{I|L}G]}G 3 -1 21.427 0.0 0.0 2.3847 0.0 0.0 0.0 668.3488378393149 668.3488378393149 3.6136836314688345 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}G 2.3847 - 271 1 1.213 84717.3 1.0 7400 4749 12138 HBL1_DMSO_200M_050219_2,12151 HBL1_DMSO_200M_050219_2,12151,LGRWAPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12152 65.229 169.0 682860.0 25 0 33692.0 -1 SQWDSPMRV 9 111 561.2562751053241 1120.497997277448 2 561.2582275271416 MULTI CID FTMS 0 0 0 12138 216972.15625 1.0 0 0.0 14 Oxidation (M) _SQWDSPM(Oxidation (M))RV_ ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B 15.248480904072842 0.4239247793462406 4 PMDYVQRV 8 -1 42.498 0.0 0.0 3.7928 0.0 0.0 114.0056475756996 0.0 114.0056475756996 0.0 9.337845517933625 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 PMDYVQRV 3.7928 - 659 + 1 1.213 93122.7 1.0 7401 4749 12138 HBL1_DMSO_200M_050219_2,12152 HBL1_DMSO_200M_050219_2,12152,SQWDSPMRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12153 65.241 676.0 158120.0 25 0 11202.0 + 45174 YQLDPTASISA 11 96 1165.571722383629 1164.5644459170294 1 1165.574877917767 MULTI CID FTMS 0 0 0 12138 216505.625 1.0 0 0.0 15 Unmodified _YQLDPTASISA_ ENSG00000165637|ENST00000332211|VDAC2;nc|ENSG00000165637|P45880-1|VDAC2;nc|ENSG00000165637|P45880-2|VDAC2 100.7086487251713 0.0002960460221903 4 [YQ]{I|L}D[TP]AS{I|L}SA 11 0 + 81.428 0.0 0.0 6.9922 6.9922 86.366 0.0 0.0 0.0 6.677805497702991 15.07062321345802 6.677805497702991 6.677805497702991 0 1.274227503252014 0.0 1.916386562212267 0.958170666312956 + + [YQ]{I|L}D[TP]AS{I|L}SA;[Q{I|L}]DY[TP]AS{I|L}SA;[YQ]{I|L}DA[TP]S{I|L}SA;[Q{I|L}]YD[TP]AS{I|L}SA;[Q{I|L}]DY[Q{I|L}]D{I|L}SA;[Q{I|L}]DYA[TP]S{I|L}SA;[YQ]{I|L}D[Q{I|L}]D{I|L}SA;[Q{I|L}]DYA{[VA]|[{I|L}G]}D{I|L}SA;[Q{I|L}]D{I|L}S[MT]S{I|L}SA;[YQ]{I|L}DA{[VA]|[{I|L}G]}D{I|L}SA 6.9922;6.4188;6.3202;6.2249;5.8129;5.7468;5.7215;5.7094;5.6269;5.618 +;-;-;-;-;-;-;-;-;- + 6521 1 1.213 72241.2 1.0 7402 4749 12138 HBL1_DMSO_200M_050219_2,12153 HBL1_DMSO_200M_050219_2,12153,YQLDPTASISA True True YQLDPTASISA 65.240694 1165.57487791777 12662317.5 12138.0 nc|ENSG00000165637|P45880-2|VDAC2;;nc|ENSG00000165637|P45880-1|VDAC2;;ENSG00000165637|ENST00000332211|VDAC2 7.300973097483317 1.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12154 65.251 523.0 487550.0 25 0 26208.0 + 37711 TLPSTVAVTSV 11 205 537.8057817256998 1073.5970105181996 2 537.8055908083916 MULTI CID FTMS 0 0 0 12138 218973.265625 0.4651612865536906 -1 0.0590133666992187 16 Unmodified _TLPSTVAVTSV_ ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214 31.635753872319068 0.3493854641218054 4 C{I|L}A{M(Oxidation (M))|F}TSV 7 6 52.697 0.0 0.0 4.9085 0.0 0.0 334.2642601293308 0.0 334.2642601293308 0.0 2.262260670357648 0.0 0.0 0 0.0 0.0 1.2131582230515534 0.0 C{I|L}A{M(Oxidation (M))|F}TSV 4.9085 - 7785 + 1 1.213 209344.6 1.0 7403 4749 12138 HBL1_DMSO_200M_050219_2,12154 HBL1_DMSO_200M_050219_2,12154,TLPSTVAVTSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12155 65.255 175.0 561160.0 25 0 80016.0 + -1 YLTDRVMTV 9 113 548.7875383952016 1095.5605238572032 2 549.2866699099541 MULTI CID FTMS 0 0 0 12138 185740.0 0.1066972270870447 -7 0.6349258422851562 17 Carbamidomethyl (C) _YLC(Carbamidomethyl (C))LATEKV_ nc|ENSG00000171720|O15379-2|HDAC3;ENSG00000171720|ENST00000305264|HDAC3;ENST00000469550.6_1_5:141001037-141014565:-|nuORF 19.438996006549623 0.310492472477042 4 [Y{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}VAT{I|L}[SG] 10 -1 + 45.691 0.0 0.0 4.1706 4.1706 81.077 0.0 0.0 0.0 17.35863111416478 31.002055076861524 17.35863111416478 14.776296993281406 0 0.0 2.0 0.3807196863200844 0.0 [Y{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}VAT{I|L}[SG];[Y{I|L}][TP]{[CA]|SS}AT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}T]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CA]|SS}AT{I|L}[SG];[Y{I|L}][TP]{[CA]|SS}VM[KA];[Y{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}VV[VS][SG];[Y{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[TA]V{I|L}[SG];{[TV]|[{I|L}S]}[WY]VAT{I|L}[SG];[KT]YQQAT{I|L}[SG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TA{[CA]|SS}QQTV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TA{[CA]|SS}QQS{I|L} 4.1706;2.8219;2.582;2.5471;2.4591;2.4434;2.4118;2.2915;1.9972;1.4283 -;-;-;-;-;-;-;-;-;- 336 1 1.213 81708.7 1.0 7404 4749 12138 HBL1_DMSO_200M_050219_2,12155 HBL1_DMSO_200M_050219_2,12155,YLCLATEKV False False YLTDRVMTV 65.254498 549.286669909954 1522602.375 12138.0 nc|ENSG00000171720|O15379-2|HDAC3;;ENSG00000171720|ENST00000305264|HDAC3;;ENST00000469550.6_1_5:141001037-141014565:-|nuORF 6.954706350962321 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12156 65.267 730.0 665830.0 25 0 19284.0 -1 0 202 910.4224407745764 1818.8303286159528 2 910.9230224490166 MULTI CID FTMS 0 0 0 12138 167821.46875 0.0390702945437211 -3 0.2735137939453125 18 4 [MN]PN{I|L}NADQ[NP]TY{I|L}{[QS]|[NT]} 16 -1 + 112.73 0.0 0.0 6.1979 6.1979 84.8 0.0 0.0 0.0 63.09405066638162 4.438200260161125 4.438200260161125 8.45098040014257 0 1.920818753952375 1.5228787452803376 1.127862320874889 2.204493397426739 [MN]PN{I|L}NADQ[NP]TY{I|L}{[QS]|[NT]};[MN]PN{I|L}NADH{[DS]|[MA]|[CV]|TT}TY{I|L}{[QS]|[NT]};[MN]PN{I|L}NAD[AG][NP]TY{I|L}{[QS]|[NT]};[MN]PGG{I|L}NADQ[NP]TY{I|L}{[QS]|[NT]};[MN]PN{I|L}GGADQ[NP]TY{I|L}{[QS]|[NT]};[MN]PN{I|L}NWQ[NP]TY{I|L}{[QS]|[NT]};[MN]PN{I|L}NADQ[{I|L}T]N{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NADQ[NP]TYK{[CP]|[EA]};[MN]PN{I|L}GGADH{[DS]|[MA]|[CV]|TT}TY{I|L}{[QS]|[NT]};[MN]PGG{I|L}NADH{[DS]|[MA]|[CV]|TT}TY{I|L}{[QS]|[NT]} 6.1979;5.7333;5.7023;5.7023;5.7023;5.6782;5.3483;5.328;5.2377;5.2377 -;-;-;-;-;-;-;-;-;- 409227 + 1 1.213 315220.1 1.0 7405 4749 12138 HBL1_DMSO_200M_050219_2,12156 HBL1_DMSO_200M_050219_2,12156, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12157 65.279 700.0 232780.0 25 0 22133.0 + 32335 RYMELYTHVY 10 119 687.8283276797034 1373.6421024262067 2 687.8288452029228 MULTI CID FTMS 0 0 0 12138 150407.109375 1.0 0 0.0 19 Unmodified _RYMELYTHVY_ ENSG00000055130|ENST00000325222|CUL1 38.61474834105838 0.1721950110283317 4 {NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}G{I|L}YTHVY 11 3 + 77.99 0.0 0.0 5.6776 5.6776 76.964 0.0 0.0 0.0 3.2492292037814394 12.974258713951556 3.2492292037814394 3.2492292037814394 0 1.4916440611282624 0.958607314841775 0.8494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}G{I|L}YTHVY;[YT]P{[MS]|[{M(Oxidation (M))|F}A]}{I|L}YTHVY;[Y{M(Oxidation (M))|F}][DP]G{I|L}YTHVY;[YT][WE]{I|L}YTHVY;{[QN]|[E{I|L}]|[KN]}[Y{I|L}]SSYTHVY;[YQ][KC]G{I|L}YTHVY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K]G{I|L}YTHVY;[YQ][WK]SYTHVY;[YQ]{[QV]|[N{I|L}]|[RA]|[KV]}SSYTHVY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[KC]G{I|L}YTHVY 5.6776;5.441;5.1412;4.9623;4.791;4.7304;4.5747;4.4709;4.3251;4.2979 -;-;-;-;-;-;-;-;-;- 2089 1 1.213 119100.3 1.0 7406 4749 12138 HBL1_DMSO_200M_050219_2,12157 HBL1_DMSO_200M_050219_2,12157,RYMELYTHVY False True RYMELYTHVY 65.279346 687.828845202923 1881972.125 12138.0 ENSG00000055130|ENST00000325222|CUL1 5.948529243469238 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12159 65.284 21.0 1699900.0 25 0 171620.0 + 5152 DIKDTEPLI 9 70 522.2842687813646 1042.5539846295292 2 522.2852050662041 MULTI CID FTMS 0 0 0 12158 1819718.375 0.3952164834688698 2 -0.2440567016601562 1 Unmodified _DIKDTEPLI_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 34.40172386719151 0.1061884637610825 4 [{I|L}P]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}TEP 7 5 35.436 0.0 0.0 3.399 0.0 0.0 0.0 241.1572920848604 241.1572920848604 19.95190709918816 0.0 0.0 0.0 0 0.75 1.6989700043360187 0.4247425010840047 0.0 [{I|L}P]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}TEP 3.399 - 156 1 1.211 37971.4 1.0 7407 4750 12158 HBL1_DMSO_200M_050219_2,12159 HBL1_DMSO_200M_050219_2,12159,DIKDTEPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12160 65.285 19.0 1910200.0 25 0 116470.0 + 3594 DAALDFKNV 9 73 496.75656257932326 991.4985722254464 2 496.7562438845634 MULTI CID FTMS 0 0 0 12158 1270640.375 0.2932586296906965 2 -0.2440567016601562 2 Unmodified _DAALDFKNV_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 22.736283301280096 0.2418982879461534 4 [YV]VV 4 8 33.188 0.0 0.0 3.3472 0.0 0.0 0.0 528.2218721979124 528.2218721979124 6.888793896675267 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YV]VV 3.3472 - 92 + 1 1.211 34471.4 1.0 7408 4750 12158 HBL1_DMSO_200M_050219_2,12160 HBL1_DMSO_200M_050219_2,12160,DAALDFKNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12161 65.286 14.0 4322000.0 25 0 474120.0 + 44619 YPFKPPKI 8 80 495.2945804491195 988.574607965039 2 495.2948181033134 MULTI CID FTMS 0 0 0 12158 3615484.75 0.7847562703440863 -4 0.38330078125 3 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 42.09456458481378 0.1992492688217789 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 71.579 0.0 0.0 7.2407 7.2407 94.299 0.0 0.0 0.0 51.9136756363956 9.641237821364967 9.641237821364967 26.00833760139686 0 0.8494850021680094 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 7.2407;4.6098 +;- + 127 + 1 1.211 50588.4 1.0 7409 4750 12158 HBL1_DMSO_200M_050219_2,12161 HBL1_DMSO_200M_050219_2,12161,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12162 65.287 22.0 1815000.0 25 0 176830.0 + 35111 SQWDSPMRV 9 52 553.2582542611765 1104.5019555891529 2 553.2585937380791 MULTI CID FTMS 0 0 0 12158 2285620.0 0.8162548138381408 1 -0.1119003295898437 4 Unmodified _SQWDSPMRV_ ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B 21.53697664764585 0.2571576504437394 4 {[QS]|[NT]}WDSV 6 3 45.635 0.0 0.0 4.1317 0.0 0.0 0.0 399.1822908990844 399.1822908990844 35.17728766960431 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.0 {[QS]|[NT]}WDSV 4.1317 - 39 + 1 1.211 35626.0 1.0 7410 4750 12158 HBL1_DMSO_200M_050219_2,12162 HBL1_DMSO_200M_050219_2,12162,SQWDSPMRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12163 65.288 36.0 1435000.0 25 0 139990.0 + 21744 LPMDYVQRV 9 56 560.7944633592394 1119.5743737852788 2 560.7946044802666 MULTI CID FTMS 0 0 0 12158 1343291.875 0.2614028767528479 -2 0.1688003540039062 5 Unmodified _LPMDYVQRV_ ENSG00000179115|ENST00000314606|FARSA;nc|ENSG00000179115|Q9Y285-2|FARSA 19.62595529434964 0.305431704817896 4 {I|L}PMDYVQ[RV] 9 0 + 75.411 0.0 0.0 6.7357 6.7357 88.454 0.0 0.0 0.0 68.42145952513228 5.642492736872597 5.642492736872597 9.208187539523747 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + {I|L}PMDYVQ[RV];{I|L}PMDYV[AG][RV];{I|L}PM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[ET]|[MV]}[RV];{I|L}PV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{[ET]|[MV]}[RV];{I|L}VE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[ET]|[MV]}[RV];{I|L}VP[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{[ET]|[MV]}[RV] 6.7357;5.9132;3.3861;3.1172;1.2597;0.99077 +;-;-;-;-;- + 100 + 1 1.211 48210.3 1.0 7411 4750 12158 HBL1_DMSO_200M_050219_2,12163 HBL1_DMSO_200M_050219_2,12163,LPMDYVQRV False True LPMDYVQRV 65.288323 560.794604480267 179036880.0 12158.0 ENSG00000179115|ENST00000314606|FARSA;;nc|ENSG00000179115|Q9Y285-2|FARSA 6.326070626576741 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12164 65.29 63.0 1317900.0 25 0 250310.0 + 14133 IAYDNIKVV 9 100 517.7981590805141 1033.581765227828 2 517.7981445193291 MULTI CID FTMS 0 0 0 12158 1079833.25 0.6470803257054452 -1 0.1097869873046875 6 Unmodified _IAYDNIKVV_ ENSG00000105849|ENST00000222567|POLR1F 53.40400417844725 0.0329064971918313 4 {I|L}AYDN{I|L}KVV 9 0 + 79.735 0.0 0.0 7.7144 7.7144 91.275 0.0 0.0 0.0 5.076381522919391 12.252684618815096 5.076381522919391 9.208187539523747 0 1.6861818737241734 2.0 0.0 0.0 + + {I|L}AYDN{I|L}KVV;{I|L}AYDGG{I|L}KVV;{I|L}A[DG][YG]{I|L}KVV;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}A{I|L}KVV;{[YD]|[{M(Oxidation (M))|F}M]}NA{I|L}{I|L}KVV;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}AK{I|L}VV;{[YD]|[{M(Oxidation (M))|F}M]}NA{I|L}K{I|L}VV;{[YD]|[{M(Oxidation (M))|F}M]}GG{I|L}A{I|L}KVV;{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}KA{I|L}VV;{[QV]|[N{I|L}]|[RA]|[KV]}DYA{I|L}KVV 7.7144;6.8235;5.3567;5.2844;4.8227;4.5174;4.0558;4.0251;3.8812;3.7291 +;-;-;-;-;-;-;-;-;- + 1100 + 1 1.211 68759.2 1.0 7412 4750 12158 HBL1_DMSO_200M_050219_2,12164 HBL1_DMSO_200M_050219_2,12164,IAYDNIKVV True True IAYDNIKVV 65.289867 517.798144519329 22763000.0 12158.0 ENSG00000105849|ENST00000222567|POLR1F 6.943980058034261 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12165 65.291 40.0 1715600.0 25 0 142510.0 + 41393 VPLAKGTLI 9 100 456.2997156085351 910.5848782838702 2 456.2997924685478 MULTI CID FTMS 0 0 0 12158 1009497.125 0.9891411563933258 -1 0.1097869873046875 7 Unmodified _VPLAKGTLI_ ENSG00000119285|ENST00000366582|HEATR1 29.081581746732265 0.1611639662936252 4 VP{I|L}A[KA]S{I|L}{I|L} 9 2 + 50.67 0.0 0.0 5.5646 5.5646 89.064 0.0 0.0 0.0 30.66016017094704 3.974403835475613 3.974403835475613 50.6703290631166 0 0.3252574989159953 1.3010299956639813 0.3807196863200844 0.0 VP{I|L}A[KA]S{I|L}{I|L} 5.5646 - 106 + 1 1.211 60012.8 1.0 7413 4750 12158 HBL1_DMSO_200M_050219_2,12165 HBL1_DMSO_200M_050219_2,12165,VPLAKGTLI False True VPLAKGTLI 65.291046 456.299792468548 27230544.0 12158.0 ENSG00000119285|ENST00000366582|HEATR1 3.386690696080526 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12166 65.292 48.0 847430.0 25 0 150140.0 + 17351 KLYDIDVAKV 10 81 582.3377183063687 1162.6608836795374 2 582.3380004763603 MULTI CID FTMS 0 0 0 12158 793247.6875 1.0 0 0.0 8 Unmodified _KLYDIDVAKV_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 27.088373467376528 0.3600710273140457 4 VAVK 4 8 33.64 0.0 0.0 2.8934 0.0 0.0 747.3794333394968 0.0 747.3794333394968 0.0 12.67126416391246 0.0 0.0 0 1.424742501084005 0.0 0.0 0.3252574989159953 VAVK 2.8934 - 208 + 1 1.211 36564.3 1.0 7414 4750 12158 HBL1_DMSO_200M_050219_2,12166 HBL1_DMSO_200M_050219_2,12166,KLYDIDVAKV False True KLYDIDVAKV 65.292344 582.33800047636 8571643.0 12158.0 ENSG00000198242|ENST00000422514|RPL23A;;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 4.662762482961019 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12167 65.294 83.0 826860.0 25 0 170700.0 + 9143 FFTFSCSL 8 81 476.2178271533371 0 476.2176696658134 PEAK CID FTMS 0 0 0 12158 539403.9375 1.0 0 0.0 9 Unmodified _FFTFSCSL_ REV__ENSG00000108510|ENST00000397786|MED13 10.183394434864962 0.5394990767616434 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.73543 0.0 0.0 684.2786413906509 116.05108820133046 800.3297295919814 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.73543 + + 13 + 1 1.211 58496.5 1.0 7415 4750 12158 HBL1_DMSO_200M_050219_2,12167 HBL1_DMSO_200M_050219_2,12167,FFTFSCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12168 65.302 429.0 440730.0 25 0 41504.0 + 37954 TMFQNDFEKA 10 125 615.7766326728661 1229.538712412532 2 615.7774536013603 MULTI CID FTMS 0 0 0 12158 453984.5 1.0 0 0.0 10 Unmodified _TMFQNDFEKA_ ENSG00000046651|ENST00000340096|OFD1;ENST00000490265.5_1_X:13753187-13770868:+|nuORF;nc|ENSG00000046651|O75665-2|OFD1;nc|ENSG00000046651|O75665-3|OFD1 87.25819977447905 0.0111194359805254 4 TM{M(Oxidation (M))|F}QND{M(Oxidation (M))|F}E[KA] 10 0 + 86.781 0.0 0.0 7.058 7.058 88.736 0.0 0.0 0.0 33.869638510539914 7.384381005764311 7.384381005764311 9.164539485499247 0 0.7302046884880937 1.6989700043360187 1.055462187404089 1.4802046884880935 + + TM{M(Oxidation (M))|F}QND{M(Oxidation (M))|F}E[KA];TM{M(Oxidation (M))|F}QGGD{M(Oxidation (M))|F}E[KA];TM{M(Oxidation (M))|F}[AG]ND{M(Oxidation (M))|F}E[KA];TM{M(Oxidation (M))|F}QND{M(Oxidation (M))|F}[QT]V;TM{M(Oxidation (M))|F}[AG]GGD{M(Oxidation (M))|F}E[KA];TM{M(Oxidation (M))|F}QGGD{M(Oxidation (M))|F}[QT]V;TM{M(Oxidation (M))|F}[AG]ND{M(Oxidation (M))|F}[QT]V;TM{M(Oxidation (M))|F}QTV{[MG]|[TS]}[C(Carbamidomethyl (C))R];TM{M(Oxidation (M))|F}QND{M(Oxidation (M))|F}[VS]AA;TM{M(Oxidation (M))|F}[KA]{M(Oxidation (M))|F}[DN]AW 7.058;6.3126;6.3126;6.2027;5.5702;5.4573;5.4573;5.3171;5.2732;5.2624 +;-;-;-;-;-;-;-;-;- + 2231 + 1 1.211 141468.1 1.0 7416 4750 12158 HBL1_DMSO_200M_050219_2,12168 HBL1_DMSO_200M_050219_2,12168,TMFQNDFEKA True True TMFQNDFEKA 65.301852 615.77745360136 3678454.75 12158.0 nc|ENSG00000046651|O75665-3|OFD1;;nc|ENSG00000046651|O75665-2|OFD1;;ENSG00000046651|ENST00000340096|OFD1;;ENST00000490265.5_1_X:13753187-13770868:+|nuORF 8.516995112101236 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12169 65.305 186.0 503050.0 25 0 61165.0 + 42035 VQTDVLVRV 9 119 514.8083675322767 1027.6021821313534 2 514.8091308474541 MULTI CID FTMS 0 0 0 12158 445840.0625 0.6851893279210597 3 -0.3264694213867187 11 Unmodified _VQTDVLVRV_ ENSG00000134262|ENST00000369569|AP4B1;ENST00000479285.5_1_1:114438859-114442862:-|nuORF;nc|ENSG00000134262|Q9Y6B7-2|AP4B1 65.47368725323818 0.0230515101691092 4 VQTDV{I|L}RVV 9 2 + 90.716 0.0 0.0 8.8279 8.8279 80.935 0.0 0.0 0.0 70.64426940916401 14.454774046158208 14.454774046158208 0.7968969065610167 0 2.2302046884880937 0.958607314841775 0.5 0.3807196863200844 VQTDV{I|L}RVV;VQTDV{I|L}VRV;VQTDVV{I|L}RV;{[QV]|[N{I|L}]|[RA]|[KV]}TDR{I|L}VVV;V[AG]TDV{I|L}RVV;V[AG]TDV{I|L}VRV;{[QV]|[N{I|L}]|[RA]|[KV]}TDVG{I|L}VVV;VQTK[QA]RVV;VQTK[QA]VRV;VQTDVV[RV]{I|L} 8.8279;8.7503;8.1645;7.3167;6.999;6.9214;6.8036;6.5899;6.5123;6.4237 -;+;-;-;-;-;-;-;-;- + 666 + 1 1.211 76871.6 1.0 7417 4750 12158 HBL1_DMSO_200M_050219_2,12169 HBL1_DMSO_200M_050219_2,12169,VQTDVLVRV True True VQTDVLVRV 65.305456 514.809130847454 7967307.0 12158.0 ENSG00000134262|ENST00000369569|AP4B1;;ENST00000479285.5_1_1:114438859-114442862:-|nuORF;;nc|ENSG00000134262|Q9Y6B7-2|AP4B1 5.47030242284139 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12170 65.315 564.0 659750.0 25 0 62381.0 + + 22474 LPLGRELRV 9 187 351.5575280218208 1051.6507546656624 3 351.5570861697197 MULTI CID FTMS 0 0 0 12158 407237.625 0.5568023125943521 -2 0.1688003540039062 12 Unmodified _LPVLRRGEI_ ENSG00000011478|ENST00000012049|QPCTL;nc|ENSG00000011478|Q9NXS2-3|QPCTL 40.23920728925047 0.0741434193262949 4 {I|L}PV{I|L}NEVR 8 -1 79.307 0.0 0.0 7.5412 0.0 0.0 0.0 128.07200037174064 128.07200037174064 62.875311040644405 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.0 1.5044321917401078 {I|L}PV{I|L}NEVR 7.5412 - 709 + 1 1.211 307798.7 1.0 7418 4750 12158 HBL1_DMSO_200M_050219_2,12170 HBL1_DMSO_200M_050219_2,12170,LPVLRRGEI False False LPLGRELRV 65.315331 351.55708616972 13190253.0 12158.0 ENSG00000011478|ENST00000012049|QPCTL;;nc|ENSG00000011478|Q9NXS2-3|QPCTL 0.3694315552711487 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12171 65.318 118.0 488080.0 25 0 53475.0 + 28939 QAVMDDILR 9 104 530.7766075255827 1059.5386621179653 2 530.7758666872978 MULTI CID FTMS 0 0 0 12158 352957.53125 1.0 0 0.0 13 Unmodified _QAVMDDILR_ REV__ENSG00000138413|ENST00000345146|IDH1;REV__ENSG00000182054|ENST00000330062|IDH2;REV__nc|ENSG00000182054|P48735-2|IDH2 10.823927491677226 0.5436922275383211 4 {I|L}PVER{I|L} 6 -1 33.409 0.0 0.0 3.1531 0.0 0.0 334.0942392538727 0.0 334.0942392538727 0.0 19.596463608100336 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 {I|L}PVER{I|L} 3.1531 - 133 + 1 1.211 47522.4 1.0 7419 4750 12158 HBL1_DMSO_200M_050219_2,12171 HBL1_DMSO_200M_050219_2,12171,QAVMDDILR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12172 65.322 197.0 660760.0 25 0 70402.0 + 15414 IPPEVQRIV 9 133 525.819493787968 1049.624434642736 2 525.8199340701103 MULTI CID FTMS 0 0 0 12158 303400.59375 0.9466740251654808 -1 0.1097869873046875 14 Unmodified _IPPEVQRIV_ ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1 27.628801355627647 0.1796483985696185 4 {I|L}PPEVQ[RV]{I|L} 9 2 + 66.186 0.0 0.0 6.3057 6.3057 80.098 0.0 0.0 0.0 34.609178215846654 3.679767852945943 3.679767852945943 3.679767852945943 0 0.4247425010840047 2.0 0.0 0.2887254899964357 {I|L}PPEVQ[RV]{I|L};{I|L}PPEVQ[R{I|L}]V;{I|L}PPEV[AG][RV]{I|L};{I|L}PPEV[AG][R{I|L}]V;{I|L}VRR{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H{I|L} 6.3057;5.9551;5.4284;5.0778;1.5283 -;+;-;-;- + 717 + 1 1.211 111979.7 1.0 7420 4750 12158 HBL1_DMSO_200M_050219_2,12172 HBL1_DMSO_200M_050219_2,12172,IPPEVQRIV False True IPPEVQRIV 65.321589 525.81993407011 4891969.5 12158.0 nc|ENSG00000127463|Q8N766-4|EMC1;;nc|ENSG00000127463|Q8N766-2|EMC1;;ENSG00000127463|ENST00000477853|EMC1;;nc|ENSG00000127463|Q8N766-3|EMC1 5.422337690989177 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12173 65.331 543.0 290560.0 25 0 39746.0 + 31021 RLFDRGDFYTA 11 128 680.8356647406745 1359.6567765481489 2 680.8365966677666 MULTI CID FTMS 0 0 0 12158 295762.21875 0.4766592662631346 1 -0.1119003295898437 15 Unmodified _RLFDRGDFYTA_ ENSG00000095002|ENST00000233146|MSH2 15.46650911470482 0.7134255847325598 4 A{M(Oxidation (M))|F}[W{I|L}]Y[HQ]VD 9 10 38.623 0.0 0.0 2.8407 0.0 0.0 0.0 197.0933016412719 197.0933016412719 16.404784322338564 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.079689690656103 0.0 A{M(Oxidation (M))|F}[W{I|L}]Y[HQ]VD 2.8407 - 784 + 1 1.211 113148.0 1.0 7421 4750 12158 HBL1_DMSO_200M_050219_2,12173 HBL1_DMSO_200M_050219_2,12173,RLFDRGDFYTA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12174 65.342 599.0 337190.0 25 0 38253.0 + -1 NYAMMEGDLIC 11 159 674.7624338848331 1347.510314836466 2 674.7631713747978 MULTI CID FTMS 0 0 0 12158 221349.9375 0.6331646729196523 -1 0.1097869873046875 16 Carbamidomethyl (C),2 Oxidation (M) _NYAM(Oxidation (M))M(Oxidation (M))EGDLIC(Carbamidomethyl (C))_ REV__ENSG00000174405|ENST00000442234|LIG4 14.40537977576856 0.7354982482299568 4 [YQ]{I|L}D[DP]A 7 -1 43.918 0.0 0.0 3.2592 0.0 0.0 0.0 542.1362175947693 542.1362175947693 12.270235476004403 0.0 0.0 0.0 0 2.0228787452803374 1.0 0.0 0.6989700043360187 [YQ]{I|L}D[DP]A 3.2592 - 2584 1 1.211 146382.9 1.0 7422 4750 12158 HBL1_DMSO_200M_050219_2,12174 HBL1_DMSO_200M_050219_2,12174,NYAMMEGDLIC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12175 65.349 315.0 330350.0 25 0 28095.0 + 27771 LPFQKIQHSI 10 139 404.23364968539136 806.4527464375827 2 404.2363769412041 MULTI CID FTMS 0 0 0 12158 244235.40625 0.105874032608983 -4 0.38330078125 17 Unmodified _PLPPAAIE_ ENSG00000102898|ENST00000219169|NUTF2;ENST00000568233.5_1_16:67899033-67902523:+|nuORF 6.354104778181461 0.7857632046190106 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)) 3 7 25.942 0.0 0.0 3.2168 0.0 0.0 0.0 399.28353192025776 399.28353192025776 6.417180006894327 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)) 3.2168 - 115 1 1.211 86490.2 1.0 7423 4750 12158 HBL1_DMSO_200M_050219_2,12175 HBL1_DMSO_200M_050219_2,12175,PLPPAAIE False False LPFQKIQHSI 65.348537 404.236376941204 2417333.0 12158.0 ENSG00000102898|ENST00000219169|NUTF2;;ENST00000568233.5_1_16:67899033-67902523:+|nuORF 3.647403717041016 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12176 65.362 800.0 257090.0 25 0 15613.0 + 12105 GQIEFYRRL 9 185 394.5525194337295 1180.6357289013883 3 394.5525695681572 MULTI CID FTMS 0 0 0 12158 184834.21875 1.0 0 0.0 18 Unmodified _GQIEFYRRL_ ENSG00000136100|ENST00000378060|VPS36;nc|ENSG00000136100|Q86VN1-2|VPS36 25.399314129420983 0.2080152500878129 4 {I|L}E{I|L} 3 6 25.445 0.0 0.0 2.1552 0.0 0.0 185.07889639243643 637.3223017163771 822.4011981088136 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 {I|L}E{I|L} 2.1552 - 151 + 1 1.211 159404.9 0.9200000166893004 7424 4750 12158 HBL1_DMSO_200M_050219_2,12176 HBL1_DMSO_200M_050219_2,12176,GQIEFYRRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12177 65.376 797.0 282060.0 25 0 28181.0 + 30133 AYAKGALVL 9 192 451.76900955141673 901.5234661696336 2 453.2770263552666 MULTI CID FTMS 0 0 0 12158 178729.796875 1.0 0 0.0 19 Unmodified _QVLLYPGL_ ENST00000478067.1_1_3:148709334-148714532:+|nuORF;nc|ENSG00000163754|P46976-2|GYG1;nc|ENSG00000163754|P46976-3|GYG1;ENSG00000163754|ENST00000345003|GYG1 20.871210003555333 0.6025813472596342 4 KVAYAK 6 6 27.167 0.0 0.0 3.0135 0.0 0.0 0.0 238.1202334039672 238.1202334039672 7.20159303405957 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KVAYAK 3.0135 - 1118 + 1 1.211 169607.2 1.0 7425 4750 12158 HBL1_DMSO_200M_050219_2,12177 HBL1_DMSO_200M_050219_2,12177,QVLLYPGL False False AYAKGALVL 65.376116 453.277026355267 2816353.25 12158.0 ENST00000478067.1_1_3:148709334-148714532:+|nuORF;;nc|ENSG00000163754|P46976-2|GYG1;;nc|ENSG00000163754|P46976-3|GYG1;;ENSG00000163754|ENST00000345003|GYG1 3.2727088133494058 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12178 65.391 800.0 260900.0 25 0 12723.0 + -1 PVRPMGVL 8 222 442.75604670405966 883.4975404749193 2 442.7547485232353 MULTI CID FTMS 0 0 0 12158 164663.171875 0.898966027797509 3 -0.3264694213867187 20 Oxidation (M) _PVRPM(Oxidation (M))GVL_ REV__ENST00000411425.1_1_2:95824760-95825081:-|nuORF 11.114462752807354 0.7467182956244686 4 {I|L} 1 -1 13.099 0.0 0.0 1.4826 0.0 0.0 752.4025372784334 0.0 752.4025372784334 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4826 + + 461 + 1 1.211 162337.5 0.959999978542328 7426 4750 12158 HBL1_DMSO_200M_050219_2,12178 HBL1_DMSO_200M_050219_2,12178,PVRPMGVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12180 65.396 4.9 10791000.0 25 0 821180.0 + 31166 RLPEAIEEV 9 57 528.2902244617638 1054.5658959903276 2 528.2907592654228 MULTI CID FTMS 0 0 0 12179 9901902.0 0.5817708735427236 2 -0.214569091796875 1 Unmodified _RLPEAIEEV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 41.95555342248728 0.0647214845423414 4 [R{I|L}][EP]A{I|L}EEV 9 0 + 49.349 0.0 0.0 4.6795 4.6795 81.424 0.0 0.0 0.0 4.840599579066804 32.35917160486835 4.840599579066804 9.946049681132926 0 0.6549471895720984 1.0457574905606752 0.0 0.0 + + [R{I|L}][EP]A{I|L}EEV;{[QN]|[E{I|L}]|[KN]}[RP]A{I|L}EEV 4.6795;3.7364 +;- + 74 1 1.211 51650.5 1.0 7427 4751 12179 HBL1_DMSO_200M_050219_2,12180 HBL1_DMSO_200M_050219_2,12180,RLPEAIEEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12181 65.398 101.0 733130.0 25 0 83755.0 1838 ALTRVVLGT 9 116 465.29247892118246 928.570404909165 2 465.2922851443291 MULTI CID FTMS 0 0 0 12179 300054.9375 0.1259710193755185 3 -0.3365859985351562 2 Unmodified _ALTRVVLGT_ ENSG00000137877|ENST00000320955|SPTBN5 22.736283301280096 0.2418982879461534 4 [{I|L}A]S[RV]{I|L}{I|L}GT 9 2 + 53.86 0.0 0.0 5.8004 5.8004 80.17 0.0 0.0 0.0 5.228787452803374 16.020599913279618 5.228787452803374 5.228787452803374 0 0.3252574989159953 1.2218487496163564 0.3494850021680094 0.0 [{I|L}A]S[RV]{I|L}{I|L}GT;{[SA]|[TG]}{I|L}[RV]{I|L}{I|L}GT;{[TV]|[{I|L}S]}A[RV]{I|L}{I|L}GT;{[VA]|[{I|L}G]}T[RV]{I|L}{I|L}GT;[TP]KR{I|L}[{I|L}T]T 5.8004;5.2373;4.3764;3.7509;0.61547 -;-;-;-;- 352 1 1.211 62839.5 1.0 7428 4751 12179 HBL1_DMSO_200M_050219_2,12181 HBL1_DMSO_200M_050219_2,12181,ALTRVVLGT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12182 65.399 55.0 912420.0 25 0 97902.0 + 39368 RVPDGMVGL 9 91 471.7682185102676 941.5218840873353 2 472.2700073122978 MULTI CID FTMS 0 0 0 12179 647271.3125 0.4373659090665299 3 -0.3365859985351562 3 Unmodified _VAGVAEVAGGL_ ENSG00000088247|ENST00000600480|KHSRP;nc|ENSG00000088247|Q92945|KHSRP 10.823927491677226 0.8099964156050846 4 G{I|L} 2 9 17.959 0.0 0.0 1.9074 0.0 0.0 753.4052439279586 0.0 753.4052439279586 0.0 4.426806100157563 0.0 0.0 0 0.0 0.0 0.0 0.0 + G{I|L} 1.9074 + + 140 + 1 1.211 47855.9 1.0 7429 4751 12179 HBL1_DMSO_200M_050219_2,12182 HBL1_DMSO_200M_050219_2,12182,VAGVAEVAGGL False False RVPDGMVGL 65.399066 472.270007312298 24410416.0 12179.0 ENSG00000088247|ENST00000600480|KHSRP;;nc|ENSG00000088247|Q92945|KHSRP 5.273391087849935 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12183 65.401 64.0 1101500.0 25 0 145000.0 + -1 VAVEPRSLI 9 90 492.7274309881561 983.4403090431122 2 492.7265807986259 MULTI CID FTMS 0 0 0 12179 605918.625 1.0 0 0.0 4 Carbamidomethyl (C) _GLDC(Carbamidomethyl (C))TFSKG_ ENSG00000146463|ENST00000314607|ZMYM4;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;nc|ENSG00000146463|Q5VZL5-4|ZMYM4 12.531546534597751 0.4974689918368763 4 {[VA]|[{I|L}G]}V 3 -1 22.051 0.0 0.0 2.2423 0.0 0.0 0.0 711.2427742132871 711.2427742132871 -2.129843661361406 0.0 -2.129843661361406 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}V 2.2423 - 150 1 1.211 60877.1 1.0 7430 4751 12179 HBL1_DMSO_200M_050219_2,12183 HBL1_DMSO_200M_050219_2,12183,GLDCTFSKG False False VAVEPRSLI 65.400614 492.726580798626 4198330.5 12179.0 ENSG00000146463|ENST00000314607|ZMYM4;;nc|ENSG00000146463|Q5VZL5-3|ZMYM4;;nc|ENSG00000146463|Q5VZL5-2|ZMYM4;;nc|ENSG00000146463|Q5VZL5-4|ZMYM4 1.2587145070234935 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12184 65.402 80.0 631040.0 25 0 83674.0 + 16004 ITDWTQLIS 9 78 538.7859631103044 1075.5573732874086 2 538.7867309451103 MULTI CID FTMS 0 0 0 12179 455556.84375 0.9056541777032604 -1 0.1119003295898437 5 Unmodified _ITDWTQLIS_ REV__ENSG00000173821|ENST00000582970|RNF213;REV__ENST00000559070.5_1_17:78261823-78310301:+|nuORF;REV__nc|ENSG00000173821|Q63HN8-4|RNF213;REV__nc|ENSG00000173821|Q63HN8-5|RNF213;REV__nc|ENSG00000173821|Q63HN8|RNF213 20.453626601364224 0.2830276176381075 4 [{I|L}T][WD]DTVKV 9 -1 + 37.814 0.0 0.0 3.5158 3.5158 66.003 0.0 0.0 0.0 0.2909084240355568 8.730072218944898 0.2909084240355568 1.810889492111912 0 0.3182503180159344 1.3979400086720375 0.6549471895720984 0.0 [{I|L}T][WD]DTVKV;{[DS]|[MA]|[CV]|TT}[DV]VDTVKV;[TA]P{M(Oxidation (M))|F}VDTVKV;{[TV]|[{I|L}S]}[WE]DTVKV;{[ES]|[DT]|[{I|L}C]}[W{I|L}]DTVKV;{[TV]|[{I|L}S]}D[WE]TVKV;{[ES]|[DT]|[{I|L}C]}V[WE]TVKV;[{I|L}T][WD][WR]{[TV]|[{I|L}S]};{[DS]|[MA]|[CV]|TT}[DV]V[WR]{[TV]|[{I|L}S]};[TA]P{M(Oxidation (M))|F}V[WR]{[TV]|[{I|L}S]} 3.5158;3.3474;3.2963;3.1334;3.0557;2.8494;2.7717;1.2454;1.072;1.0208 -;-;-;-;-;-;-;-;-;- 236 1 1.211 52465.3 1.0 7431 4751 12179 HBL1_DMSO_200M_050219_2,12184 HBL1_DMSO_200M_050219_2,12184,ITDWTQLIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12185 65.404 67.0 914110.0 25 0 76864.0 + -1 PTPVPASML 9 109 464.7440682216888 927.4735835101776 2 464.7448913455009 MULTI CID FTMS 0 0 0 12179 447585.09375 0.2883793111557575 5 -0.4831161499023437 6 Oxidation (M) _PTPVPASM(Oxidation (M))L_ REV__ENST00000265080.8_1_5:80508218-80508326:+|nuORF 12.531546534597751 0.4974689918368763 4 V 1 -1 13.099 0.0 0.0 1.4123 0.0 0.0 810.3940985021683 0.0 810.3940985021683 0.0 -6.109243748081781 -6.109243748081781 0.0 0 0.0 0.0 0.0 0.0 V 1.4123 + + 242 + 1 1.211 53823.9 1.0 7432 4751 12179 HBL1_DMSO_200M_050219_2,12185 HBL1_DMSO_200M_050219_2,12185,PTPVPASML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12186 65.406 63.0 670090.0 25 0 76280.0 + 42962 VVSPSSFENV 10 82 532.7668853204997 1063.5192177077993 2 532.7671386599541 MULTI CID FTMS 0 0 0 12179 365798.28125 0.2668147949790734 -3 0.28070068359375 7 Unmodified _VVSPSSFENV_ ENSG00000070831|ENST00000656825|CDC42;nc|ENSG00000289694|P60953-1|CDC42 15.847184025352805 0.5816416552707754 4 VVS 3 7 18.785 0.0 0.0 1.7663 0.0 0.0 0.0 775.3268708662555 775.3268708662555 3.6080184802477824 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + VVS 1.7663 + + 137 1 1.211 41602.8 1.0 7433 4751 12179 HBL1_DMSO_200M_050219_2,12186 HBL1_DMSO_200M_050219_2,12186,VVSPSSFENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12187 65.41 264.0 311720.0 25 0 20305.0 + 39046 TVVEDGSLPQV 11 131 572.2986162844868 1142.5826796357735 2 572.2989990115166 MULTI CID FTMS 0 0 0 12179 256007.65625 0.543558523186636 -2 0.2216873168945312 8 Unmodified _TVVEDGSLPQV_ ENSG00000158526|ENST00000375151|TSR2 45.69961567697781 0.1414455360291008 4 {[TV]|[{I|L}S]}AAV 5 8 24.491 0.0 0.0 2.1435 0.0 0.0 0.0 698.3040290832922 698.3040290832922 2.673403400726773 0.0 0.0 0.0 0 0.0 2.0 0.7555690986777881 0.0 {[TV]|[{I|L}S]}AAV 2.1435 - 1226 1 1.211 68120.6 1.0 7434 4751 12179 HBL1_DMSO_200M_050219_2,12187 HBL1_DMSO_200M_050219_2,12187,TVVEDGSLPQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12188 65.416 322.0 222020.0 25 0 17574.0 + 5607 DPAKFISV 8 111 438.7447731495743 875.4749933659485 2 438.7451049685478 MULTI CID FTMS 0 0 0 12179 231683.140625 1.0 0 0.0 9 Unmodified _DPAKFISV_ ENSG00000142751|ENST00000374135|GPN2 57.72198328787511 0.1146897545241271 4 [DP]AK{M(Oxidation (M))|F}{I|L}SV 8 0 + 60.594 0.0 0.0 6.9213 6.9213 93.237 0.0 0.0 0.0 16.06865597838884 32.16654200631496 16.06865597838884 23.98522765414172 0 1.579689690656103 1.6989700043360187 0.6203715150305281 0.0 + + [DP]AK{M(Oxidation (M))|F}{I|L}SV;[PA]DK{M(Oxidation (M))|F}{I|L}SV;[VS][QP]{M(Oxidation (M))|F}{I|L}SV;[PA]KD{M(Oxidation (M))|F}{I|L}SV;[KA]PD{M(Oxidation (M))|F}{I|L}SV;[PA]K{M(Oxidation (M))|F}D{I|L}SV;[KA]{M(Oxidation (M))|F}PD{I|L}SV;[KA]P{M(Oxidation (M))|F}D{I|L}SV;[PS]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}SV;[PA]K{M(Oxidation (M))|F}{I|L}DSV 6.9213;4.1816;3.3846;3.0591;2.8719;2.8056;2.7612;2.6185;2.3831;2.0269 +;-;-;-;-;-;-;-;-;- + 302 1 1.211 63092.9 1.0 7435 4751 12179 HBL1_DMSO_200M_050219_2,12188 HBL1_DMSO_200M_050219_2,12188,DPAKFISV True True DPAKFISV 65.416322 438.745104968548 1555114.5 12179.0 ENSG00000142751|ENST00000374135|GPN2 6.697465260823567 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12189 65.427 612.0 321640.0 25 0 30958.0 + 30326 RAEPEDHYFL 10 122 638.801981297667 1275.589409662134 2 638.8018676638603 MULTI CID FTMS 0 0 0 12179 230209.140625 1.0 0 0.0 10 Unmodified _RAEPEDHYFL_ ENSG00000115091|ENST00000263238|ACTR3;ENSG00000133627|ENST00000256001|ACTR3B;ENST00000489779.1_1_2:114684960-114691984:+|nuORF;ENST00000541653.2_1_14:22054224-22054383:-|nuORF;nc|ENSG00000133627|Q9P1U1-2|ACTR3B;nc|ENSG00000133627|Q9P1U1-3|ACTR3B 45.739877483867886 0.1051543674217965 4 [KG][NG][EP]DHY{M(Oxidation (M))|F}{I|L} 11 4 + 58.269 0.0 0.0 4.568 4.568 69.102 0.0 0.0 0.0 1.7253301815996878 16.575773191777927 1.7253301815996878 1.7253301815996878 0 1.3441876774005248 0.0 0.6747425010840047 0.484825539911597 [KG][NG][EP]DHY{M(Oxidation (M))|F}{I|L};[KP]M[EP]DHY{M(Oxidation (M))|F}{I|L} 4.568;4.4327 -;- 237 1 1.211 147173.0 1.0 7436 4751 12179 HBL1_DMSO_200M_050219_2,12189 HBL1_DMSO_200M_050219_2,12189,RAEPEDHYFL True True RAEPEDHYFL 65.427026 638.80186766386 2516993.25 12179.0 nc|ENSG00000133627|Q9P1U1-3|ACTR3B;;ENST00000489779.1_1_2:114684960-114691984:+|nuORF;;ENSG00000115091|ENST00000263238|ACTR3;;ENST00000541653.2_1_14:22054224-22054383:-|nuORF;;nc|ENSG00000133627|Q9P1U1-2|ACTR3B;;ENSG00000133627|ENST00000256001|ACTR3B 5.506784915924072 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12190 65.429 107.0 459340.0 25 0 41726.0 + 10040 FPNNYVTKI 9 84 548.2964134101129 1094.5782738870255 2 548.2947875857353 MULTI CID FTMS 0 0 0 12179 238943.8125 0.7781373008670923 1 -0.1321563720703125 11 Unmodified _FPNNYVTKI_ ENSG00000157483|ENST00000288235|MYO1E 16.149105407346934 0.3995459350917656 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PVT 6 5 25.684 0.0 0.0 2.3465 0.0 0.0 0.0 403.2334612251695 403.2334612251695 13.901532321127856 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PVT 2.3465 - 122 1 1.211 42993.9 1.0 7437 4751 12179 HBL1_DMSO_200M_050219_2,12190 HBL1_DMSO_200M_050219_2,12190,FPNNYVTKI False True FPNNYVTKI 65.429301 548.294787585735 1901925.625 12179.0 ENSG00000157483|ENST00000288235|MYO1E 0.8217728535334269 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12191 65.442 750.0 339970.0 25 0 14216.0 -1 RCHRRRRRCCC 11 150 866.9068741437397 1731.7991953542794 2 866.9063598513603 MULTI CID FTMS 0 0 0 12179 200502.125 0.4067617077470927 -5 0.4952011108398437 12 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 4 NMPN{I|L}NADQRGMM{I|L}Q 15 -1 + 120.48 0.0 0.0 6.9572 6.9572 86.276 0.0 0.0 0.0 69.2672223044756 10.8539367495448 10.8539367495448 6.690067809585756 0 1.9608930019204875 1.5228787452803376 0.0 1.8539171939081167 NMPN{I|L}NADQRGMM{I|L}Q;NMPN{I|L}NWQRGMM{I|L}Q;NMPN{I|L}GGADQRGMM{I|L}Q;NMPN{I|L}NAD[AG]RGMM{I|L}Q;NMPGG{I|L}NADQRGMM{I|L}Q;NMPN{I|L}NAD{I|L}{I|L}DMM{I|L}Q;NMPGG{I|L}NWQRGMM{I|L}Q;NMPN{I|L}NWQ[VG]GMM{I|L}Q;NMPN{I|L}NW[AG]RGMM{I|L}Q;NMPN{I|L}GGWQRGMM{I|L}Q 6.9572;6.5709;6.4357;6.4357;6.4357;6.1723;6.0483;6.0483;6.0483;6.0483 -;-;-;-;-;-;-;-;-;- 17182 + 1 1.211 169453.0 1.0 7438 4751 12179 HBL1_DMSO_200M_050219_2,12191 HBL1_DMSO_200M_050219_2,12191,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12192 65.447 252.0 386490.0 25 0 40970.0 + + 41721 GALDMLTKV 9 134 481.7615104181769 961.5084679031538 2 482.2631103396416 MULTI CID FTMS 0 0 0 12179 183470.46875 0.7774497714681917 -6 0.572509765625 13 Unmodified _VPSSLYPSL_ ENSG00000169738|ENST00000306869|DCXR;ENST00000579842.5_1_17:79993838-79994531:-|nuORF;ENST00000577286.5_1_17:79993838-79994415:-|nuORF;ENST00000582074.5_1_17:79994229-79994802:-|nuORF;ENST00000580750.5_1_17:79994229-79994415:-|nuORF 18.13498045792455 0.3457906370836843 4 {I|L}D{M(Oxidation (M))|F}{I|L}TKV 7 -1 31.865 0.0 0.0 3.314 0.0 0.0 127.05846897912882 0.0 127.05846897912882 0.0 4.368113217716079 0.0 0.0 0 0.0 0.0 0.0 0.1344005005252609 {I|L}D{M(Oxidation (M))|F}{I|L}TKV 3.314 - 452 + 1 1.211 77991.5 1.0 7439 4751 12179 HBL1_DMSO_200M_050219_2,12192 HBL1_DMSO_200M_050219_2,12192,VPSSLYPSL False False GALDMLTKV 65.446997 482.263110339642 1011399.4375 12179.0 ENSG00000169738|ENST00000306869|DCXR;;ENST00000579842.5_1_17:79993838-79994531:-|nuORF;;ENST00000577286.5_1_17:79993838-79994415:-|nuORF;;ENST00000582074.5_1_17:79994229-79994802:-|nuORF;;ENST00000580750.5_1_17:79994229-79994415:-|nuORF 5.4747748374938965 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12193 65.451 227.0 456000.0 25 0 32452.0 -1 ELQAPCFGV 9 150 510.7443421350778 1019.4741313369556 2 510.7435790896416 MULTI CID FTMS 0 0 0 12179 169742.875 1.0 0 0.0 14 Carbamidomethyl (C) _ELQAPC(Carbamidomethyl (C))FGV_ ENSG00000279961|ENST00000623286|OR8U3 20.453626601364224 0.2830276176381075 4 {[WS]|[C(Carbamidomethyl (C)){I|L}]}PS[KA]DMV 9 -1 + 42.33 0.0 0.0 4.1521 4.1521 74.865 0.0 0.0 0.0 15.509074688805804 10.902887499330731 10.902887499330731 6.478174818886373 0 0.4247425010840047 2.0 0.0 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}PS[KA]DMV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}PS[WK]MV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}PS[PA][YG]GV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}PS[PA][YN]V;{[WS]|[C(Carbamidomethyl (C)){I|L}]}PS[KA][EC]{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}WD[KC]PV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}W{[CT]|[{M(Oxidation (M))|F}G]}AAPV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}P{[CT]|[{M(Oxidation (M))|F}G]}[KC]PV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[HV][YV]MV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[HV][YE]TV 4.1521;3.5167;3.2938;2.9483;2.8039;2.7534;2.0176;1.9674;1.6774;1.4772 -;-;-;-;-;-;-;-;-;- 645 + 1 1.211 83573.0 1.0 7440 4751 12179 HBL1_DMSO_200M_050219_2,12193 HBL1_DMSO_200M_050219_2,12193,ELQAPCFGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12194 65.465 800.0 418510.0 25 0 56428.0 + 6110 DSVIISRI 8 173 451.76900955141673 901.5234661696336 2 451.7688476443291 MULTI CID FTMS 0 0 0 12179 160778.375 0.0561884597040395 -3 0.28070068359375 15 Unmodified _DSVIISRI_ ENSG00000072415|ENST00000261681|PALS1;nc|ENSG00000072415|Q8N3R9-2|PALS1 120.45040980043947 0.0090142352896633 4 {[DS]|[MA]|[CV]|TT}V{I|L}{I|L}SR{I|L} 8 0 + 71.213 0.0 0.0 7.8992 7.8992 86.725 0.0 0.0 0.0 6.989700043360188 4.929155219028942 4.929155219028942 4.929155219028942 0 1.274227503252014 0.0 1.1861818737241734 1.2786596949921218 + + {[DS]|[MA]|[CV]|TT}V{I|L}{I|L}SR{I|L};{[DS]|[MA]|[CV]|TT}V{I|L}{I|L}S{I|L}R;{[DS]|[MA]|[CV]|TT}V{I|L}{I|L}{I|L}SR;{[DS]|[MA]|[CV]|TT}V{I|L}{I|L}RTV;{[DS]|[MA]|[CV]|TT}V{I|L}{I|L}RS{I|L};{[DS]|[MA]|[CV]|TT}{I|L}V{I|L}SR{I|L};{[DS]|[MA]|[CV]|TT}{I|L}V{I|L}S{I|L}R;{[DS]|[MA]|[CV]|TT}{I|L}V{I|L}{I|L}SR;{[DS]|[MA]|[CV]|TT}{I|L}V{I|L}RTV;{[DS]|[MA]|[CV]|TT}{I|L}V{I|L}RS{I|L} 7.8992;7.3524;7.2852;6.9082;6.8514;6.2842;5.7374;5.6702;5.2932;5.2364 +;-;-;-;-;-;-;-;-;- + 574 + 1 1.211 256974.3 0.9200000166893004 7441 4751 12179 HBL1_DMSO_200M_050219_2,12194 HBL1_DMSO_200M_050219_2,12194,DSVIISRI True True DSVIISRI 65.465072 451.768847644329 21281566.0 12179.0 ENSG00000072415|ENST00000261681|PALS1;;nc|ENSG00000072415|Q8N3R9-2|PALS1 2.7313374678293862 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12195 65.48 800.0 154460.0 25 0 7313.7 42318 VSVTALSV 8 165 388.2327092970335 0 388.5603210330009 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _VSVTALSV_ nc|ENSG00000024048|Q8IWV8|UBR2 5.230669730166228 0.5807325378471833 4 {I|L}MT 3 7 11.682 0.0 0.0 1.5085 0.0 0.0 142.0987060923108 284.1724032037719 426.2711092960827 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}MT 1.5085 - 32 + 1 1.211 99635.0 0.75 7442 4751 12179 HBL1_DMSO_200M_050219_2,12195 HBL1_DMSO_200M_050219_2,12195,VSVTALSV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12196 65.487 343.0 292820.0 25 0 24611.0 41681 VPRNGRAL 8 141 441.7684155261089 0 441.7686340212822 PEAK CID FTMS 0 0 0 12179 147447.65625 0.3710344590048531 19 -1.7737350463867188 17 Unmodified _VPRNGRAL_ nc|ENSG00000142609|Q9C0B2-2|CFAP74 20.871210003555333 0.4015059659087983 4 P 1 7 9.2917 0.0 0.0 1.0541 0.0 0.0 99.06764772189032 682.3790116982358 781.4466594201261 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + P 1.0541 + + 264 + 1 1.211 80978.1 1.0 7443 4751 12179 HBL1_DMSO_200M_050219_2,12196 HBL1_DMSO_200M_050219_2,12196,VPRNGRAL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12197 65.494 443.0 193090.0 25 0 19537.0 + 9260 FHLLTNWFL 9 145 397.5489503452664 1189.625021635999 3 397.5485717654228 MULTI CID FTMS 0 0 0 12179 107358.953125 1.0 0 0.0 18 Unmodified _FHLLTNWFL_ REV__ENST00000296861.2_1_6:47199552-47199924:-|nuORF 13.90604991867851 0.4602628045680013 4 VVE{[DS]|[MA]|[CV]|TT}K{[WT]|[RM]}N{I|L} 10 -1 VVE{[DS]|[MA]|[CV]|TT}K{[WT]|[RM]}N + + 12.474 2.3855 0.22536 1.0486 1.0486 44.237 0.0 0.0 0.0 0.0 -6.443347930278279 -6.443347930278279 0.0 0 0.0 0.0 0.0 0.0 VVE{[DS]|[MA]|[CV]|TT}K{[WT]|[RM]}N{I|L} 1.0486 - 99 + 1 1.211 68322.4 1.0 7444 4751 12179 HBL1_DMSO_200M_050219_2,12197 HBL1_DMSO_200M_050219_2,12197,FHLLTNWFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12198 65.508 800.0 110940.0 25 0 10208.0 + -1 HQFDQVMPGV 10 138 579.1712796868876 578.1640032202876 1 579.2728759646416 MULTI CID FTMS 0 0 0 12179 18844.390625 0.0334870148101978 7 -0.6336593627929688 19 ENSG00000164053|ENST00000320211|ATRIP;nc|ENSG00000164053|Q8WXE1-2|ATRIP;nc|ENSG00000164053|Q8WXE1-3|ATRIP;nc|ENSG00000164053|Q8WXE1-5|ATRIP 4 V 1 -1 11.783 0.0 0.0 2.038 0.0 0.0 461.0844876947 0.0 461.0844876947 0.0 0.6734928694872799 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.038 - 68 + 1 1.211 68427.9 0.8899999856948853 7445 4751 12179 HBL1_DMSO_200M_050219_2,12198 HBL1_DMSO_200M_050219_2,12198, False False HQFDQVMPGV 65.508249 579.272875964642 1888964.0 12179.0 ENSG00000164053|ENST00000320211|ATRIP;;nc|ENSG00000164053|Q8WXE1-2|ATRIP;;nc|ENSG00000164053|Q8WXE1-3|ATRIP;;nc|ENSG00000164053|Q8WXE1-5|ATRIP 4.456384340922038 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12199 65.523 800.0 262030.0 25 0 16099.0 -1 0 254 366.7366575692964 731.4587622053928 2 366.7366515994072 MULTI CID FTMS 0 0 0 12179 96014.984375 0.0017428569152449 20 -1.8124847412109373 20 4 [{I|L}V]PKY{I|L} 6 -1 + 37.198 0.0 0.0 5.0855 5.0855 69.365 0.0 0.0 0.0 10.146939271409394 0.6526673151259104 0.6526673151259104 0.6526673151259104 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}V]PKY{I|L};[{I|L}V]PK{I|L}Y 5.0855;4.9963 -;- 96 + 1 1.211 161835.2 0.6000000238418579 7446 4751 12179 HBL1_DMSO_200M_050219_2,12199 HBL1_DMSO_200M_050219_2,12199, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12201 65.528 4.5 15623000.0 25 0 2990400.0 + 44614 YPFKPPKI 8 76 330.5324354067559 988.5754768204677 3 330.5321838259697 MULTI CID FTMS 0 0 0 12200 10486750.0 0.9602440160272182 -2 0.2440567016601562 1 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 48.491 0.0 0.0 4.9051 4.9051 81.031 0.0 0.0 0.0 23.084588059846 5.037144051603093 5.037144051603093 9.208187539523747 0 0.0 1.0969100130080565 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 4.9051;3.9736 +;- + 115 + 1 1.216 63485.5 1.0 7447 4752 12200 HBL1_DMSO_200M_050219_2,12201 HBL1_DMSO_200M_050219_2,12201,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12202 65.529 37.0 1316200.0 25 0 270760.0 + 37822 TLTEEGVIKV 10 74 544.8135257369634 1087.6124985407266 2 544.8137695193291 MULTI CID FTMS 0 0 0 12200 1131961.25 0.1706651600779417 2 -0.2044296264648437 2 Unmodified _TLTEEGVIKV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 15.538449434065043 0.58682192184891 4 [{I|L}T]TEE[VG]{I|L}VK 10 2 + 60.891 0.0 0.0 5.5986 5.5986 76.837 0.0 0.0 0.0 47.07834387816234 2.174617874626037 2.174617874626037 3.424226808222066 0 0.8494850021680094 2.0 0.0 0.0 [{I|L}T]TEE[VG]{I|L}VK;[{I|L}T]TEE[VG]{I|L}KV 5.5986;5.2837 -;+ + 159 + 1 1.216 43235.0 1.0 7448 4752 12200 HBL1_DMSO_200M_050219_2,12202 HBL1_DMSO_200M_050219_2,12202,TLTEEGVIKV False True TLTEEGVIKV 65.528842 544.813769519329 92569360.0 12200.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 7.042195002237956 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12203 65.53 22.0 2048400.0 25 0 222090.0 + 42763 VVHDGFEGL 9 75 486.74276674945975 971.4709805657196 2 486.7431823611259 MULTI CID FTMS 0 0 0 12200 1376888.25 0.783225581302086 1 -0.0824127197265625 3 Unmodified _VVHDGFEGL_ ENSG00000141959|ENST00000349048|PFKL;ENSG00000152556|ENST00000359794|PFKM;ENST00000397961.6_1_21:45725201-45746742:+|nuORF;ENST00000460521.5_1_21:45741509-45746742:+|nuORF;ENST00000466134.5_1_21:45739892-45745863:+|nuORF;ENST00000467315.5_1_21:45739892-45746742:+|nuORF;ENST00000474114.5_1_21:45741509-45744801:+|nuORF;ENST00000498841.5_1_21:45739892-45744801:+|nuORF;ENST00000547581.5_1_12:48529049-48539488:+|nuORF;nc|ENSG00000141959|P17858-2|PFKL;nc|ENSG00000152556|P08237-2|PFKM;nc|ENSG00000152556|P08237-3|PFKM 34.10243960390752 0.1078313939113124 4 DG{M(Oxidation (M))|F}EG{I|L} 6 3 39.602 0.0 0.0 4.0765 0.0 0.0 335.1955738751969 0.0 335.1955738751969 0.0 19.76911912748342 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + DG{M(Oxidation (M))|F}EG{I|L} 4.0765 + + 194 1 1.216 42849.3 1.0 7449 4752 12200 HBL1_DMSO_200M_050219_2,12203 HBL1_DMSO_200M_050219_2,12203,VVHDGFEGL True True VVHDGFEGL 65.530021 486.743182361126 14914042.0 12200.0 ENST00000547581.5_1_12:48529049-48539488:+|nuORF;;nc|ENSG00000152556|P08237-2|PFKM;;nc|ENSG00000152556|P08237-3|PFKM;;ENST00000498841.5_1_21:45739892-45744801:+|nuORF;;ENSG00000141959|ENST00000349048|PFKL;;ENST00000466134.5_1_21:45739892-45745863:+|nuORF;;ENST00000460521.5_1_21:45741509-45746742:+|nuORF;;nc|ENSG00000141959|P17858-2|PFKL;;ENSG00000152556|ENST00000359794|PFKM;;ENST00000474114.5_1_21:45741509-45744801:+|nuORF;;ENST00000467315.5_1_21:45739892-45746742:+|nuORF;;ENST00000397961.6_1_21:45725201-45746742:+|nuORF 5.853701114654541 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12204 65.531 56.0 997450.0 25 0 104150.0 + 12848 GVVEGKALSEL 11 95 551.311223066452 1100.607893199704 2 551.3112670779228 MULTI CID FTMS 0 0 0 12200 1091261.0 0.6715661009772919 -2 0.2440567016601562 4 Unmodified _GVVEGKALSEL_ ENSG00000078237|ENST00000179259|TIGAR 49.52724829834842 0.1202481389936634 4 [VG]V[{M(Oxidation (M))|F}T]V{I|L}AND 10 7 62.452 0.0 0.0 5.6744 0.0 0.0 0.0 82.06694971256093 82.06694971256093 35.893170903024725 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.805462187404089 0.0 [VG]V[{M(Oxidation (M))|F}T]V{I|L}AND 5.6744 - 1124 + 1 1.216 53791.4 1.0 7450 4752 12200 HBL1_DMSO_200M_050219_2,12204 HBL1_DMSO_200M_050219_2,12204,GVVEGKALSEL True True GVVEGKALSEL 65.531451 551.311267077923 20418862.0 12200.0 ENSG00000078237|ENST00000179259|TIGAR 5.9974236488342285 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12205 65.533 48.0 992930.0 25 0 186440.0 20204 LLARELWG 8 76 479.27739840107984 956.5402438689596 2 479.2774841189384 MULTI CID FTMS 0 0 0 12200 1003358.25 0.5920758176547166 5 -0.401214599609375 5 Unmodified _LLARELWG_ ENST00000481206.1_1_14:105935538-105936549:+|nuORF 2.889219685676258 0.8067950007271085 4 V 1 8 9.7539 0.0 0.0 1.0197 0.0 0.0 839.4609190782355 0.0 839.4609190782355 0.0 0.2210183124602682 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0197 - 8 + 1 1.216 42424.4 1.0 7451 4752 12200 HBL1_DMSO_200M_050219_2,12205 HBL1_DMSO_200M_050219_2,12205,LLARELWG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12206 65.534 73.0 824100.0 25 0 85181.0 + 30035 QTPQRLLEV 9 83 542.3117340738437 1082.6089152144873 2 542.3118163943291 MULTI CID FTMS 0 0 0 12200 762869.3125 0.0925070980742009 3 -0.28936767578125 6 Unmodified _QTPQRLLEV_ ENSG00000133119|ENST00000380071|RFC3;nc|ENSG00000133119|P40938-2|RFC3 29.081581746732265 0.1611639662936252 4 YC(Carbamidomethyl (C)){I|L} 3 8 15.15 0.0 0.0 1.3994 0.0 0.0 628.3911610334 0.0 628.3911610334 0.0 2.676062401770313 0.0 0.0 0 0.0 0.0 0.0 0.0 YC(Carbamidomethyl (C)){I|L} 1.3994 - 51 1 1.216 55053.1 1.0 7452 4752 12200 HBL1_DMSO_200M_050219_2,12206 HBL1_DMSO_200M_050219_2,12206,QTPQRLLEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12207 65.536 45.0 1630000.0 25 0 114700.0 + + 39765 SVPIDLQKV 9 106 499.72197156019325 997.4293901871864 2 499.7216979861259 MULTI CID FTMS 0 0 0 12200 769070.5625 1.0 0 0.0 7 Unmodified _VEMEHWPA_ ENSG00000198056|ENST00000338193|PRIM1 13.50788311687929 0.7113601687236069 4 VE{M(Oxidation (M))|F} 3 -1 36.03 0.0 0.0 3.6122 0.0 0.0 0.0 619.2376803033811 619.2376803033811 1.3368439446363 0.0 0.0 0.0 0 0.2887254899964357 0.721246399047171 0.4247425010840047 0.0 VE{M(Oxidation (M))|F} 3.6122 + + 248 + 1 1.216 61344.4 1.0 7453 4752 12200 HBL1_DMSO_200M_050219_2,12207 HBL1_DMSO_200M_050219_2,12207,VEMEHWPA False False SVPIDLQKV 65.53568 499.721697986126 19774838.0 12200.0 ENSG00000198056|ENST00000338193|PRIM1 2.8756161530812583 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12208 65.538 97.0 614750.0 25 0 96033.0 + 44811 YPNKYESII 9 81 563.7929533723128 1125.5713538114255 2 563.7928344607353 MULTI CID FTMS 0 0 0 12200 625394.5625 0.2340634139965262 -3 0.3538436889648437 8 Unmodified _YPNKYESII_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 51.629811660486645 0.0367964933207742 4 {[TV]|[{I|L}S]}[KC]AESY{I|L}{I|L} 10 5 + 58.167 0.0 0.0 5.1678 5.1678 69.971 0.0 0.0 0.0 0.7918124604762511 13.521825181113629 0.7918124604762511 0.7918124604762511 0 0.7302046884880937 1.3979400086720375 0.75 0.0 {[TV]|[{I|L}S]}[KC]AESY{I|L}{I|L};[NP]KYESY{I|L}{I|L};{[TV]|[{I|L}S]}[KC]AEYS{I|L}{I|L};[NP]KYEYS{I|L}{I|L};{[TV]|[{I|L}S]}[KC]AYES{I|L}{I|L};[NP]KYYES{I|L}{I|L};{[TV]|[{I|L}S]}[KC]AES{I|L}Y{I|L};[NP]KYES{I|L}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ESY{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EYS{I|L}{I|L} 5.1678;5.0974;4.7439;4.6735;4.4764;4.4061;4.234;4.1636;3.81;3.3861 -;-;-;-;-;-;-;-;-;- 560 1 1.216 53183.2 1.0 7454 4752 12200 HBL1_DMSO_200M_050219_2,12208 HBL1_DMSO_200M_050219_2,12208,YPNKYESII True True YPNKYESII 65.537803 563.792834460735 81823884.0 12200.0 nc|ENSG00000006125|P63010|AP2B1;;ENSG00000006125|ENST00000610402|AP2B1;;nc|ENSG00000006125|P63010-3|AP2B1 5.414287249247233 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12209 65.54 120.0 702780.0 25 0 96637.0 40109 VGLALSPAP 9 111 412.74647771628827 823.4784024993766 2 412.7459289431572 MULTI CID FTMS 0 0 0 12200 560078.6875 0.6733613881198168 -1 0.1321563720703125 9 Unmodified _VGLALSPAP_ ENST00000380191.8_1_10:5855216-5855492:-|nuORF 5.230669730166228 0.7320841359114558 4 {I|L}K[HS] 4 7 12.307 0.0 0.0 1.4945 0.0 0.0 340.21174819160314 0.0 340.21174819160314 0.0 2.553221444316627 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}K[HS] 1.4945 - 38 1 1.216 69274.9 1.0 7455 4752 12200 HBL1_DMSO_200M_050219_2,12209 HBL1_DMSO_200M_050219_2,12209,VGLALSPAP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12210 65.542 90.0 512060.0 25 0 90676.0 + 45924 YYYDGDIGNY 10 69 621.7513017931685 1241.488050653137 2 621.7514526247978 MULTI CID FTMS 0 0 0 12200 514334.34375 0.5535408089357023 -2 0.2440567016601562 10 Unmodified _YYYDGDIGNY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 20.453626601364224 0.5043500229302764 4 {[YD]|[{M(Oxidation (M))|F}M]}GDYY 6 5 32.37 0.0 0.0 2.6074 0.0 0.0 0.0 462.19632097561424 462.19632097561424 7.219712763997563 0.0 0.0 0.0 0 0.0 1.0 0.5994850021680094 0.0 {[YD]|[{M(Oxidation (M))|F}M]}GDYY 2.6074 - 156 1 1.216 38228.9 1.0 7456 4752 12200 HBL1_DMSO_200M_050219_2,12210 HBL1_DMSO_200M_050219_2,12210,YYYDGDIGNY False True YYYDGDIGNY 65.542282 621.751452624798 9457589.0 12200.0 ENSG00000196591|ENST00000519065|HDAC2;;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 4.282932599385579 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12211 65.546 220.0 483700.0 25 0 53482.0 -1 LPMDYVQRV 9 98 568.7915895817443 1135.5686262302886 2 568.7920410037041 MULTI CID FTMS 0 0 0 12200 352160.15625 0.850905609043526 -1 0.1321563720703125 11 Oxidation (M) _LPM(Oxidation (M))DYVQRV_ ENSG00000179115|ENST00000314606|FARSA;nc|ENSG00000179115|Q9Y285-2|FARSA 26.268140514670165 0.1969607489560049 4 {I|L}P{M(Oxidation (M))|F}DYVQRV 9 -1 + 70.146 0.0 0.0 6.1771 6.1771 86.334 0.0 0.0 0.0 59.17642843483343 8.197859905088634 8.197859905088634 9.208187539523747 0 0.2887254899964357 1.6989700043360187 0.0 0.0 {I|L}P{M(Oxidation (M))|F}DYVQRV;{I|L}P{M(Oxidation (M))|F}DYV[AG]RV;{I|L}P{M(Oxidation (M))|F}DYV[RN]{I|L};[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]C[KP]VQRV;{[DS]|[MA]|[CV]|TT}[RN]YVQRV;[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]K{[CP]|[EA]}VQRV;[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]C[KP]V[AG]RV;{[DS]|[MA]|[CV]|TT}[RN]YV[AG]RV;[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]C[KP]V[RN]{I|L};[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]K{[CP]|[EA]}V[AG]RV 6.1771;5.3662;5.0637;1.6545;1.3894;1.2343;0.84361;0.57852;0.54104;0.42345 +;-;-;-;-;-;-;-;-;- + 152 + 1 1.216 87826.0 1.0 7457 4752 12200 HBL1_DMSO_200M_050219_2,12211 HBL1_DMSO_200M_050219_2,12211,LPMDYVQRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12212 65.551 242.0 445820.0 25 0 38354.0 + 26226 NQIPTVNNL 9 158 506.77535457420544 1011.5361562152108 2 506.7754699587822 MULTI CID FTMS 0 0 0 12200 338636.3125 0.2585176526159843 2 -0.2044296264648437 12 Unmodified _NQIPTVNNL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 34.10243960390752 0.1078313939113124 4 {[QN]|[E{I|L}]|[KN]}{I|L}[NG]{I|L} 6 4 33.043 0.0 0.0 3.2667 0.0 0.0 0.0 369.18914628772967 369.18914628772967 14.85584346626286 0.0 0.0 0.0 0 0.5 0.5376020021010439 0.3252574989159953 0.9124379954164592 {[QN]|[E{I|L}]|[KN]}{I|L}[NG]{I|L} 3.2667 - 873 1 1.216 85238.6 1.0 7458 4752 12200 HBL1_DMSO_200M_050219_2,12212 HBL1_DMSO_200M_050219_2,12212,NQIPTVNNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12213 65.552 50.0 1060700.0 25 0 78222.0 + 42483 VTIEDVQKL 9 106 522.7996482118753 1043.5847434905504 2 522.8014404177666 MULTI CID FTMS 0 0 0 12200 311674.03125 0.2692024052306663 -2 0.2440567016601562 13 Unmodified _VTIEDVQKL_ ENSG00000135069|ENST00000376588|PSAT1;ENST00000439132.1_1_1:79520632-79520758:-|nuORF;nc|ENSG00000135069|Q9Y617-2|PSAT1 41.95555342248728 0.0647214845423414 4 VT{I|L}EDVQK{I|L} 9 0 + 80.54 0.0 0.0 7.7176 7.7176 91.296 0.0 0.0 0.0 63.30430347904108 11.11034060664305 11.11034060664305 9.208187539523747 0 0.8494850021680094 1.3010299956639813 0.3807196863200844 0.555462187404089 + + VT{I|L}EDVQK{I|L};VT{I|L}EDV[AG]K{I|L};VT{I|L}N[QT]QK{I|L};VT[NG]ADVQK{I|L};VT[NG]WVQK{I|L};VT{I|L}GG[QT]QK{I|L};VT{I|L}N[QT][AG]K{I|L};VT[NG]ADV[AG]K{I|L};VT[NG]WV[AG]K{I|L};VQ[SG]ADVQK{I|L} 7.7176;6.8352;6.1629;6.0132;5.3873;5.2805;5.2805;5.135;4.5049;4.2403 +;-;-;-;-;-;-;-;-;- + 396 + 1 1.216 46781.9 1.0 7459 4752 12200 HBL1_DMSO_200M_050219_2,12213 HBL1_DMSO_200M_050219_2,12213,VTIEDVQKL True True VTIEDVQKL 65.552282 522.801440417767 8100056.5 12200.0 ENSG00000135069|ENST00000376588|PSAT1;;nc|ENSG00000135069|Q9Y617-2|PSAT1;;ENST00000439132.1_1_1:79520632-79520758:-|nuORF 7.582581996917725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12214 65.555 126.0 262140.0 25 0 15849.0 -1 0 56 917.9308754657424 1833.8471979982849 2 918.9226562380792 MULTI CID FTMS 0 0 0 12200 311716.8125 0.5466728325534268 -6 0.6273574829101562 14 4 {M(Oxidation (M))|F}WHW{[QN]|[E{I|L}]|[KN]} 6 -1 16.611 0.0 0.0 0.90581 0.0 0.0 917.4791126935562 0.0 917.4791126935562 0.0 9.621440527729424 0.0 0.0 0 0.3935078169319297 0.0 0.0 0.0 {M(Oxidation (M))|F}WHW{[QN]|[E{I|L}]|[KN]} 0.90581 - 101 1 1.216 28660.3 1.0 7460 4752 12200 HBL1_DMSO_200M_050219_2,12214 HBL1_DMSO_200M_050219_2,12214, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12215 65.567 722.0 410320.0 25 0 27628.0 + 21503 AVAPLIKGV 9 211 434.2431596063684 866.4717662795367 2 434.2433349490166 MULTI CID FTMS 0 0 0 12200 291748.71875 0.5687040240737807 5 -0.401214599609375 15 Unmodified _LPIAPDLE_ nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A 11.114462752807354 0.7467182956244686 4 {[VA]|[{I|L}G]}A 3 6 16.427 0.0 0.0 1.8958 0.0 0.0 0.0 622.3055882612351 622.3055882612351 0.5090746888058142 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}A 1.8958 - 230 1 1.216 229660.3 1.0 7461 4752 12200 HBL1_DMSO_200M_050219_2,12215 HBL1_DMSO_200M_050219_2,12215,LPIAPDLE False False AVAPLIKGV 65.567423 434.243334949017 1103491.0 12200.0 nc|ENSG00000090889|O95239-2|KIF4A;;ENSG00000090889|ENST00000374403|KIF4A 4.762441158294678 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12216 65.578 609.0 415030.0 25 0 15235.0 + 24765 MPHLSMQQV 9 210 535.760819024161 1069.507085115122 2 535.7597534060478 MULTI CID FTMS 0 0 0 12200 295025.40625 0.0507750629943795 -7 0.7046661376953125 16 Unmodified _MPHLSMQQV_ ENSG00000142207|ENST00000382751|URB1 68.08070601005525 0.0218408846571049 4 [AG]V[HN]SMQQV 10 4 + 67.612 0.0 0.0 6.3218 6.3218 74.956 0.0 0.0 0.0 0.963464279538357 15.026975159433531 0.963464279538357 0.963464279538357 0 0.5774509799928715 2.0 1.0189301784845295 0.3054621874040891 [AG]V[HN]SMQQV;[H{I|L}]SMPMQQV;[H{I|L}]PMSMQQV;[AG]V[HN]SQMQV;[H{I|L}]SMPQMQV;[AG]G[RH]SMQQV;[H{I|L}]PMSQMQV;[AG]G[RH]SQMQV;{[TV]|[{I|L}S]}HMPMQQV;[AG]V[HN]SM[AG]QV 6.3218;6.2317;6.0016;5.9885;5.8984;5.8757;5.6683;5.5424;5.5248;5.4649 -;-;-;-;-;-;-;-;-;- 5672 1 1.216 191904.2 1.0 7462 4752 12200 HBL1_DMSO_200M_050219_2,12216 HBL1_DMSO_200M_050219_2,12216,MPHLSMQQV True True MPHLSMQQV 65.578075 535.759753406048 167675676.0 12200.0 ENSG00000142207|ENST00000382751|URB1 7.238569100697835 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12217 65.583 258.0 308260.0 25 0 20479.0 + 41405 VPLDGRPMNI 10 98 556.2999846710574 1110.5854164089146 2 556.3003417849541 MULTI CID FTMS 0 0 0 12200 260614.625 0.0319415408232206 7 -0.6211166381835938 17 Unmodified _VPLDGRPMNI_ ENSG00000183684|ENST00000505490|ALYREF;nc|ENSG00000183684|Q86V81|ALYREF 20.41453444215458 0.5050059513928961 4 VP{I|L}D 4 6 50.974 0.0 0.0 4.5898 0.0 0.0 0.0 683.3302000821786 683.3302000821786 23.77299974054932 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + VP{I|L}D 4.5898 + + 400 + 1 1.216 71543.1 1.0 7463 4752 12200 HBL1_DMSO_200M_050219_2,12217 HBL1_DMSO_200M_050219_2,12217,VPLDGRPMNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12218 65.597 800.0 428730.0 25 0 40335.0 + -1 TVVEDGSLPQV 11 104 1143.1369421478198 3426.3889970436594 3 1143.472827136517 MULTI CID FTMS 0 0 0 12200 231945.5 1.0 0 0.0 18 ENSG00000158526|ENST00000375151|TSR2 4 VQP{I|L}SG[NS]P{[QV]|[N{I|L}]|[RA]|[KV]} 11 -1 36.407 0.0 0.0 1.0625 0.0 0.0 2301.819289675684 0.0 2301.819289675684 0.0 6.839414162318168 0.0 0.0 0 0.0 0.0 2.6223637474483468 0.3252574989159953 VQP{I|L}SG[NS]P{[QV]|[N{I|L}]|[RA]|[KV]} 1.0625 - 6159 + 1 1.216 220164.6 0.949999988079071 7464 4752 12200 HBL1_DMSO_200M_050219_2,12218 HBL1_DMSO_200M_050219_2,12218, False False TVVEDGSLPQV 65.596761 1143.47282713652 8494718.25 12200.0 ENSG00000158526|ENST00000375151|TSR2 6.948715845743815 1.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12219 65.6 100.0 415660.0 25 0 36361.0 + 136 AALEEFSRV 9 83 511.2693906317742 1020.5242283303484 2 511.2702209353447 MULTI CID FTMS 0 0 0 12200 232100.3125 0.112660880406462 5 -0.401214599609375 19 Unmodified _AALEEFSRV_ ENSG00000173473|ENST00000254480|SMARCC1 17.11289562659939 0.3734572693229295 4 [{I|L}T][RH]EE{I|L} 7 8 38.477 0.0 0.0 3.7704 0.0 0.0 0.0 139.05301185989836 139.05301185989836 25.37839947046882 0.0 0.0 0.0 0 0.5752574989159953 2.0 0.2134679910804404 0.0 [{I|L}T][RH]EE{I|L} 3.7704 - 128 1 1.216 36975.0 1.0 7465 4752 12200 HBL1_DMSO_200M_050219_2,12219 HBL1_DMSO_200M_050219_2,12219,AALEEFSRV False True AALEEFSRV 65.6001 511.270220935345 16659453.0 12200.0 ENSG00000173473|ENST00000254480|SMARCC1 3.2991331418355307 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12220 65.606 300.0 509780.0 25 0 39498.0 + 8715 EVLHSLPAV 9 143 482.7772340303453 963.5399151274906 2 482.7771484255791 MULTI CID FTMS 0 0 0 12200 191735.65625 0.2572390798537216 -6 0.6273574829101562 20 Unmodified _EVLHSLPAV_ ENSG00000163636|ENST00000295901|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;ENST00000497315.5_1_3:64004227-64005057:-|nuORF;nc|ENSG00000163636|Q15008-2|PSMD6;nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6 50.855029805455786 0.0384952370514206 4 [YV]{[RE]|[WV]}{I|L}VSV 8 6 + 47.189 0.0 0.0 4.8975 4.8975 76.764 0.0 0.0 0.0 1.8677713352057097 23.3771376077312 1.8677713352057097 5.696664623252687 0 0.3807196863200844 1.5228787452803376 0.6549471895720984 0.0 [YV]{[RE]|[WV]}{I|L}VSV;[{I|L}P]E[HA]{I|L}VSV;{NN|[MP]|[D{I|L}]|[EV]}[YR]{I|L}VSV;[YV]{[RE]|[WV]}V{I|L}SV;{[QN]|[E{I|L}]|[KN]}P[HA]{I|L}VSV;[YR]{I|L}D{I|L}VSV;[R{M(Oxidation (M))|F}]{I|L}{[QN]|[E{I|L}]|[KN]}STV;[{I|L}P]E[HA]V{I|L}SV;[R{M(Oxidation (M))|F}]{I|L}S{[QN]|[E{I|L}]|[KN]}TV;[{I|L}T][W{M(Oxidation (M))|F}]{I|L}VSV 4.8975;4.3063;4.2032;4.0396;3.5775;3.5574;3.5327;3.4484;3.4321;3.4011 -;-;-;-;-;-;-;-;-;- 1792 1 1.216 116474.9 1.0 7466 4752 12200 HBL1_DMSO_200M_050219_2,12220 HBL1_DMSO_200M_050219_2,12220,EVLHSLPAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12222 65.61 12.0 4333700.0 25 0 430480.0 + 21745 LPMDYVQRV 9 52 560.7944633592394 1119.5743737852788 2 560.7950317263603 MULTI CID FTMS 0 0 0 12221 4076309.75 0.7932446514542362 1 -0.1220169067382812 1 Unmodified _LPMDYVQRV_ ENSG00000179115|ENST00000314606|FARSA;nc|ENSG00000179115|Q9Y285-2|FARSA 19.62595529434964 0.305431704817896 4 {I|L}PMDYVQ[RV] 9 0 + 73.338 0.0 0.0 6.5505 6.5505 87.787 0.0 0.0 0.0 65.89062518744797 5.642492736872597 5.642492736872597 9.208187539523747 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + + {I|L}PMDYVQ[RV];{I|L}PMDYV[AG][RV];{I|L}PMV{[YD]|[{M(Oxidation (M))|F}M]}Q[RV];{I|L}PMV{[YD]|[{M(Oxidation (M))|F}M]}[AG][RV];{I|L}VEV{[YD]|[{M(Oxidation (M))|F}M]}Q[RV];{I|L}VEV{[YD]|[{M(Oxidation (M))|F}M]}[AG][RV] 6.5505;5.728;4.8757;4.0532;2.9344;2.112 +;-;-;-;-;- + 80 + 1 1.216 53316.8 1.0 7467 4753 12221 HBL1_DMSO_200M_050219_2,12222 HBL1_DMSO_200M_050219_2,12222,LPMDYVQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12223 65.611 17.0 2461800.0 25 0 129160.0 -1 0 60 910.4224407745764 1818.8303286159528 2 910.9251586794852 MULTI CID FTMS 0 0 0 12221 3029650.5 0.7053289324732605 1 -0.1220169067382812 2 4 [MN][NP]{I|L}NADQ 9 -1 50.273 0.0 0.0 2.7641 0.0 0.0 0.0 818.3803194635374 818.3803194635374 16.3602142082957 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.805462187404089 [MN][NP]{I|L}NADQ 2.7641 - 177 + 1 1.216 31365.3 1.0 7468 4753 12221 HBL1_DMSO_200M_050219_2,12223 HBL1_DMSO_200M_050219_2,12223, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12224 65.612 12.0 5451400.0 25 0 502150.0 + 44620 YPFKPPKI 8 65 495.2945804491195 988.574607965039 2 495.2948181033134 MULTI CID FTMS 0 0 0 12221 4565865.5 0.9910404353586988 -1 0.0824127197265625 3 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 57.47134341890925 0.1146309765603773 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 75.008 0.0 0.0 7.5875 7.5875 94.945 0.0 0.0 0.0 17.619478172486467 13.28131590713106 13.28131590713106 23.010299956639813 0 1.4476212463643423 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}KPPK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPKPY{I|L};Y{I|L}MKPPK{I|L};{I|L}YMKPPK{I|L};[KP]P{M(Oxidation (M))|F}KPY{I|L};[KP]PK{M(Oxidation (M))|F}PY{I|L};[KP]{M(Oxidation (M))|F}PKPY{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PPKPY{I|L} 7.5875;5.2599;5.018;5.0011;4.6966;3.5059;3.5059;3.2014;3.0536 +;-;-;-;-;-;-;-;- + 231 + 1 1.216 53325.1 1.0 7469 4753 12221 HBL1_DMSO_200M_050219_2,12224 HBL1_DMSO_200M_050219_2,12224,YPFKPPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12225 65.614 26.0 1776800.0 25 0 389430.0 11582 GKPHGRGV 8 68 404.23364968539136 806.4527464375827 2 404.2330200076103 MULTI CID FTMS 0 0 0 12221 2172748.25 0.941868431787256 -1 0.0824127197265625 4 Unmodified _GKPHGRGV_ ENSG00000003393|ENST00000264276|ALS2;ENST00000482891.5_1_2:202587756-202633608:-|nuORF 0.6903765706972694 0.8201419426409876 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.216 40160.8 1.0 7470 4753 12221 HBL1_DMSO_200M_050219_2,12225 HBL1_DMSO_200M_050219_2,12225,GKPHGRGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12226 65.615 21.0 2327100.0 25 0 175290.0 24855 MPLVKSVTV 9 81 487.28968303235695 972.564813131514 2 487.2888671755791 MULTI CID FTMS 0 0 0 12221 1999488.0 0.6161217330734791 -1 0.0824127197265625 5 Unmodified _MPLVKSVTV_ ENSG00000164307|ENST00000443439|ERAP1;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1 31.26834338654808 0.1333407332142048 4 [{M(Oxidation (M))|F}V]V 3 6 25.942 0.0 0.0 2.6674 0.0 0.0 0.0 624.3480929010374 624.3480929010374 0.0960698972419216 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]V 2.6674 - 50 + 1 1.216 43294.7 1.0 7471 4753 12221 HBL1_DMSO_200M_050219_2,12226 HBL1_DMSO_200M_050219_2,12226,MPLVKSVTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12227 65.616 23.0 2601300.0 25 0 549780.0 + 32376 RYQDAIRVF 9 75 584.3181167513077 1166.6216805694153 2 584.3177368044853 MULTI CID FTMS 0 0 0 12221 1505048.75 0.8362773417021332 1 -0.1220169067382812 6 Unmodified _RYQDAIRVF_ ENSG00000100129|ENST00000652021|EIF3L;ENST00000457262.1_1_10:43062145-43062928:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L 22.65808497894818 0.2428932432760099 4 R{I|L}A 3 7 17.677 0.0 0.0 1.5153 0.0 0.0 264.1468944971017 559.2273657414532 823.374260238555 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3252574989159953 R{I|L}A 1.5153 - 63 + 1 1.216 51178.1 1.0 7472 4753 12221 HBL1_DMSO_200M_050219_2,12227 HBL1_DMSO_200M_050219_2,12227,RYQDAIRVF False True RYQDAIRVF 65.615981 584.317736804485 16668185.0 12221.0 ENST00000457262.1_1_10:43062145-43062928:+|nuORF;;nc|ENSG00000100129|Q9Y262-2|EIF3L;;ENSG00000100129|ENST00000652021|EIF3L 6.603068828582764 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12228 65.617 42.0 1493100.0 25 0 158500.0 + 21647 LPLGNPRF 8 82 457.2681623202385 912.5217717072768 2 457.2681762576103 MULTI CID FTMS 0 0 0 12221 929188.4375 1.0 0 0.0 7 Unmodified _LPLGNPRF_ ENST00000491238.5_1_3:71161735-71179856:-|nuORF 18.13498045792455 0.6430038125133779 4 {I|L}P{I|L}G 4 4 56.186 0.0 0.0 6.1572 0.0 0.0 0.0 529.2566012018186 529.2566012018186 46.00456440772895 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P{I|L}G 6.1572 + + 36 + 1 1.216 54860.3 1.0 7473 4753 12221 HBL1_DMSO_200M_050219_2,12228 HBL1_DMSO_200M_050219_2,12228,LPLGNPRF False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12229 65.618 48.0 1645500.0 25 0 135650.0 + 30149 QVPDDLPNV 9 116 498.753739201996 995.492925470792 2 498.7534667849541 MULTI CID FTMS 0 0 0 12221 887943.75 0.6660499563486486 -2 0.214569091796875 8 Unmodified _QVPDDLPNV_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 37.97399986684836 0.0865783450051559 4 [DP]D{I|L}N{I|L} 6 4 35.711 0.0 0.0 3.5872 0.0 0.0 0.0 325.1517978142983 325.1517978142983 10.03669175573954 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.805462187404089 0.0 [DP]D{I|L}N{I|L} 3.5872 - 430 1 1.216 65804.7 1.0 7474 4753 12221 HBL1_DMSO_200M_050219_2,12229 HBL1_DMSO_200M_050219_2,12229,QVPDDLPNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12230 65.62 75.0 863820.0 25 0 175520.0 + 3030 AVLDLVHSA 9 81 462.7617359979682 923.5089190627364 2 462.7614013552666 MULTI CID FTMS 0 0 0 12221 642233.0625 0.2954437949646493 -2 0.214569091796875 9 Unmodified _AVLDLVHSA_ ENSG00000142544|ENST00000421832|CTU1;ENST00000598755.1_1_19:52104581-52104959:+|nuORF 60.38955033654506 0.025866396858536 4 {[VA]|[{I|L}G]}{I|L}D{I|L}V 6 3 60.406 0.0 0.0 6.5409 0.0 0.0 0.0 310.11605094958 310.11605094958 30.69599075987611 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.4247425010840047 0.0 + {[VA]|[{I|L}G]}{I|L}D{I|L}V 6.5409 + + 365 + 1 1.216 58700.1 1.0 7475 4753 12221 HBL1_DMSO_200M_050219_2,12230 HBL1_DMSO_200M_050219_2,12230,AVLDLVHSA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12231 65.622 82.0 973110.0 25 0 88738.0 + 38114 TPLQIKSVV 9 118 492.8090970049418 983.6036410766836 2 492.8090698122978 MULTI CID FTMS 0 0 0 12221 461520.0625 0.7958236378875336 -1 0.0824127197265625 10 Unmodified _TPLQIKSVV_ ENSG00000196235|ENST00000432763|SUPT5H;nc|ENSG00000196235|O00267-2|SUPT5H 51.487983226225225 0.0371074584807926 4 TP{I|L}Q{I|L}KSVV 9 0 + 85.64 0.0 0.0 8.7068 8.7068 92.949 0.0 0.0 0.0 55.26842129017561 10.956257113061511 10.956257113061511 9.208187539523747 0 2.4049471895720984 2.0 0.0 0.2887254899964357 + + TP{I|L}Q{I|L}KSVV;TP{I|L}[AG]{I|L}KSVV;[TP]{I|L}Q{I|L}KSVV;[TP]{I|L}[AG]{I|L}KSVV;{[VA]|[{I|L}G]}APT{I|L}KSVV;[{I|L}P]TQ{I|L}KSVV;[{I|L}P]QT{I|L}KSVV;[{I|L}P]T[AG]{I|L}KSVV;[Q{I|L}]PT{I|L}KSVV;[{I|L}P][AG]T{I|L}KSVV 8.7068;7.7706;5.5064;4.5702;4.4432;3.7558;2.8604;2.8197;2.0693;1.9243 +;-;+;-;-;-;-;-;-;- + 366 + 1 1.216 65514.7 1.0 7476 4753 12221 HBL1_DMSO_200M_050219_2,12231 HBL1_DMSO_200M_050219_2,12231,TPLQIKSVV True True TPLQIKSVV 65.62205 492.809069812298 4787134.0 12221.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H 5.207467238108317 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12232 65.625 144.0 561770.0 25 0 56521.0 + 21508 LPIDLRRLG 9 81 351.5575280218208 1051.6507546656624 3 351.5572997927666 MULTI CID FTMS 0 0 0 12221 375915.34375 0.5139764105531772 1 -0.1220169067382812 11 Unmodified _LPIDLRRLG_ REV__ENST00000567614.1_1_X:153746486-153746768:-|nuORF 23.78978130925829 0.2284941198415988 4 {I|L}P{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]}V[R{I|L}] 9 -1 + 63.879 0.0 0.0 6.0742 6.0742 73.798 0.0 0.0 0.0 56.88933438737884 7.147642715192504 7.147642715192504 0.796896906561031 0 0.4247425010840047 2.0 0.0 1.1549471895720984 {I|L}P{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]}V[R{I|L}];{I|L}PV{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V[R{I|L}];{I|L}VP{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V[R{I|L}] 6.0742;5.9984;4.0087 -;-;- 72 + 1 1.216 75773.6 1.0 7477 4753 12221 HBL1_DMSO_200M_050219_2,12232 HBL1_DMSO_200M_050219_2,12232,LPIDLRRLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12233 65.628 151.0 478190.0 25 0 63936.0 + 14134 IAYDNIKVV 9 119 517.7981590805141 1033.581765227828 2 517.7995483279228 MULTI CID FTMS 0 0 0 12221 291844.875 0.1748854063999834 2 -0.2069549560546875 12 Unmodified _IAYDNIKVV_ ENSG00000105849|ENST00000222567|POLR1F 32.78568957990786 0.1150597335874693 4 {I|L}AYDN{I|L}KVV 9 0 + 47.59 0.0 0.0 4.6044 4.6044 84.993 0.0 0.0 0.0 20.769469451263944 6.131222656270552 6.131222656270552 47.589957297476175 0 0.6989700043360187 2.0 0.0 0.0 + + {I|L}AYDN{I|L}KVV 4.6044 + + 554 + 1 1.216 58008.2 1.0 7478 4753 12221 HBL1_DMSO_200M_050219_2,12233 HBL1_DMSO_200M_050219_2,12233,IAYDNIKVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12234 65.629 53.0 838940.0 25 0 70530.0 42629 VTTSKMDII 9 93 504.2776804950375 0 504.2792236208916 PEAK CID FTMS 0 0 0 12221 234210.765625 0.7412072467321239 -1 0.0824127197265625 13 Unmodified _VTTSKMDII_ ENSG00000105793|ENST00000222511|GTPBP10;ENST00000416322.5_1_7:90013079-90014465:+|nuORF;nc|ENSG00000105793|A4D1E9-2|GTPBP10 14.838274106304384 0.2567717476666951 4 PSW 3 8 11.682 0.0 0.0 1.1607 0.0 0.0 131.09097210254157 502.2763765924438 633.3673486949854 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PSW 1.1607 - 68 + 1 1.216 40852.8 1.0 7479 4753 12221 HBL1_DMSO_200M_050219_2,12234 HBL1_DMSO_200M_050219_2,12234,VTTSKMDII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12235 65.643 800.0 240530.0 25 0 16923.0 + -1 DMYEQFQNI 9 196 602.2534337796722 1202.4923146261442 2 602.2538329958916 MULTI CID FTMS 0 0 0 12221 166615.234375 0.8870842152147187 -1 0.0824127197265625 14 Oxidation (M) _DM(Oxidation (M))YEQFQNI_ ENST00000553923.1_1_14:35483969-35488318:+|nuORF;nc|ENSG00000100883|P61011-2|SRP54;ENST00000556445.1_1_14:35487839-35488318:+|nuORF;ENSG00000100883|ENST00000216774|SRP54 34.40172386719151 0.1061884637610825 4 {[{M(Oxidation (M))|F}D]|MM}YEQ{M(Oxidation (M))|F} 6 -1 32.118 0.0 0.0 2.6709 0.0 0.0 0.0 370.1716605441787 370.1716605441787 8.91339155519232 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.8243923658886186 0.0 {[{M(Oxidation (M))|F}D]|MM}YEQ{M(Oxidation (M))|F} 2.6709 + + 3391 1 1.216 136085.0 0.9300000071525574 7480 4753 12221 HBL1_DMSO_200M_050219_2,12235 HBL1_DMSO_200M_050219_2,12235,DMYEQFQNI False False DMYEQFQNI 65.643138 602.253832995892 2003926.875 12221.0 ENST00000553923.1_1_14:35483969-35488318:+|nuORF;;nc|ENSG00000100883|P61011-2|SRP54;;ENST00000556445.1_1_14:35487839-35488318:+|nuORF;;ENSG00000100883|ENST00000216774|SRP54 5.385074615478516 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12236 65.657 800.0 103090.0 25 0 9201.0 + -1 NYAMMEGDLIC 11 128 674.7624338848331 1347.510314836466 2 674.7640258669853 MULTI CID FTMS 0 0 0 12221 154849.75 0.4429429365004448 2 -0.2069549560546875 15 Carbamidomethyl (C),2 Oxidation (M) _NYAM(Oxidation (M))M(Oxidation (M))EGDLIC(Carbamidomethyl (C))_ REV__ENSG00000174405|ENST00000442234|LIG4 5.296884461304476 0.8501568894076437 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}DM 6 -1 24.897 0.0 0.0 1.8476 0.0 0.0 0.0 694.2154899675785 694.2154899675785 11.709456904777758 0.0 0.0 0.0 0 0.5 0.7958800173440752 0.1549471895720985 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{I|L}DM 1.8476 - 484 1 1.216 66005.2 0.8700000047683716 7481 4753 12221 HBL1_DMSO_200M_050219_2,12236 HBL1_DMSO_200M_050219_2,12236,NYAMMEGDLIC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12237 65.671 800.0 193500.0 25 0 19266.0 + 13373 HLIDPNTLQVA 11 141 610.8350992896711 1219.655645646142 2 610.8354980349541 MULTI CID FTMS 0 0 0 12221 147221.734375 1.0 0 0.0 16 Unmodified _HLIDPNTLQVA_ ENSG00000169251|ENST00000351193|NMD3;ENST00000439704.1_1_7:63369621-63370485:-|nuORF 70.33199760932243 0.0314424197347918 4 [H{I|L}]{I|L}DPNT{I|L}QVA 11 0 + 72.9 0.0 0.0 5.9771 5.9771 84.162 0.0 0.0 0.0 8.702005871530346 8.517805440806399 8.517805440806399 8.702005871530346 0 0.9957416651753048 1.2218487496163564 1.555462187404089 0.0 + + [H{I|L}]{I|L}DPNT{I|L}QVA;{[QV]|[N{I|L}]|[RA]|[KV]}[PG]PPNT{I|L}QVA;[H{I|L}]{I|L}DPNT{I|L}[AG]VA;[H{I|L}]{I|L}DPGGT{I|L}QVA;[H{I|L}]{I|L}DG[PG]T{I|L}QVA;[H{I|L}]{I|L}DPNTQ{I|L}VA;[{I|L}T][YT]PNT{I|L}QVA;{[QV]|[N{I|L}]|[RA]|[KV]}[PG]PPNT{I|L}[AG]VA;{[QV]|[N{I|L}]|[RA]|[KV]}[PG]PPGGT{I|L}QVA;[H{I|L}]{I|L}DPGGT{I|L}[AG]VA 5.9771;5.2636;5.2286;5.2286;5.1492;4.9255;4.5793;4.5176;4.5176;4.4827 +;-;-;-;-;-;-;-;-;- + 1465 1 1.216 118317.1 0.8799999952316284 7482 4753 12221 HBL1_DMSO_200M_050219_2,12237 HBL1_DMSO_200M_050219_2,12237,HLIDPNTLQVA True True HLIDPNTLQVA 65.670806 610.835498034954 1979086.875 12221.0 ENSG00000169251|ENST00000351193|NMD3;;ENST00000439704.1_1_7:63369621-63370485:-|nuORF 7.435337384541829 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12238 65.685 800.0 234040.0 25 0 12403.0 13292 HISKHERYQ 9 181 599.3082144622352 0 599.3088867068291 PEAK CID FTMS 0 0 0 12221 126848.0625 0.6661034217171706 -4 0.4362564086914062 17 Unmodified _HISKHERYQ_ ENST00000340080.8_1_7:7612069-7612123:+|nuORF 11.640296217721598 0.2934555500198502 4 {M(Oxidation (M))|F}MER 4 7 27.735 0.0 0.0 2.3178 0.0 0.0 111.1422335125579 519.1879366510374 630.3301701635953 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3494850021680094 {M(Oxidation (M))|F}MER 2.3178 - 255 + 1 1.216 144848.0 0.8399999737739563 7483 4753 12221 HBL1_DMSO_200M_050219_2,12238 HBL1_DMSO_200M_050219_2,12238,HISKHERYQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12239 65.7 800.0 141860.0 25 0 17003.0 + 27923 PLTLFFNRSC 10 144 399.8759021453685 1196.6058770363056 3 399.8754150271416 MULTI CID FTMS 0 0 0 12221 106984.546875 0.8575840929240408 1 -0.1220169067382812 18 Unmodified _PLTLFFNRSC_ REV__ENST00000345985.7_1_2:10711800-10711884:-|nuORF 6.723162845929126 0.6955379296933136 4 [{I|L}P]V 3 -1 18.416 0.0 0.0 1.5391 0.0 0.0 0.0 884.3777941107775 884.3777941107775 6.38016329696681 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P]V 1.5391 - 111 1 1.216 89196.7 0.5600000023841858 7484 4753 12221 HBL1_DMSO_200M_050219_2,12239 HBL1_DMSO_200M_050219_2,12239,PLTLFFNRSC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12240 65.714 800.0 185850.0 25 0 10477.0 + + -1 SFMQHDVQEL 10 172 615.7766326728661 1229.538712412532 2 617.2817870974541 MULTI CID FTMS 0 0 0 12221 107081.9375 0.7490357314374613 -1 0.0824127197265625 19 Oxidation (M) _LTACYEM(Oxidation (M))DRI_ ENSG00000187555|ENST00000344836|USP7;nc|ENSG00000187555|Q93009-3|USP7;ENST00000565455.5_1_16:8987857-9023250:-|nuORF 15.847184025352805 0.5816416552707754 4 KEQV{[YC]|[HE]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}S{I|L} 10 -1 + 56.671 0.0 0.0 4.6092 4.6092 69.12 0.0 0.0 0.0 23.63872778738945 6.8065181199980245 6.8065181199980245 1.60650842086838 0 0.0 0.0 1.2753187046026266 0.805462187404089 KEQV{[YC]|[HE]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}S{I|L};KEQV{[YC]|[HE]}[C(Carbamidomethyl (C))S]T{I|L};KEQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}S{I|L};KEQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M[C(Carbamidomethyl (C))S]T{I|L};KEQV{M(Oxidation (M))|F}H[C(Carbamidomethyl (C))S]PV;KEQV{[YC]|[HE]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}TV;KEQV{[YC]|[HE]}Q[W{M(Oxidation (M))|F}];KE{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QM{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}S{I|L};KEQV{M(Oxidation (M))|F}H[CS]GPV;KE{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QM[C(Carbamidomethyl (C))S]T{I|L} 4.6092;4.4785;4.2995;4.1689;4.0191;3.9218;3.8436;3.8063;3.7069;3.6756 -;-;-;-;-;-;-;-;-;- 4705 + 1 1.216 114166.4 0.7900000214576721 7485 4753 12221 HBL1_DMSO_200M_050219_2,12240 HBL1_DMSO_200M_050219_2,12240,LTACYEMDRI False False SFMQHDVQEL 65.713745 617.281787097454 1220678.125 12221.0 ENSG00000187555|ENST00000344836|USP7;;nc|ENSG00000187555|Q93009-3|USP7;;ENST00000565455.5_1_16:8987857-9023250:-|nuORF 5.991943836212158 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12241 65.728 800.0 109140.0 25 0 8061.4 -1 0 102 874.4058951994691 1746.797237465738 2 874.9083129763603 MULTI CID FTMS 0 0 0 12221 103237.6015625 0.8679323914014982 -2 0.214569091796875 20 4 [MN]P[HV]RQADEVEP[EP] 15 -1 + 53.828 0.0 0.0 3.0815 3.0815 68.369 0.0 0.0 0.0 14.442059438411905 31.74435451993462 14.442059438411905 3.679767852945943 0 0.3807196863200844 1.3979400086720375 0.0 0.0 [MN]P[HV]RQADEVEP[EP];[MN]P[HV]RQWEVEP[EP];[MN]P[HV]RQDAEVEP[EP];[MN]P[HV]R{[CP]|[EA]}NEVEP[EP];[MN]P[HV]RQAD{[HG]|PP}{I|L}{M(Oxidation (M))|F}[EP];[MN]P[HV]RQAD{[HG]|PP}YP[EP];[MN]P[HV][VG]QADEVEP[EP];[MN]P[HV]R[AG]ADEVEP[EP];[MN]P[HV]RQADN{[QD]|[EN]|[WG]|[KD]|[RS]}P[EP];[MN]P[HV]RQAD{[HG]|PP}{I|L}M{[QN]|[E{I|L}]|[KN]} 3.0815;2.8708;2.8537;2.6259;2.5805;2.5805;2.5645;2.5645;2.4082;2.4082 -;-;-;-;-;-;-;-;-;- 4908 1 1.216 64358.0 0.6800000071525574 7486 4753 12221 HBL1_DMSO_200M_050219_2,12241 HBL1_DMSO_200M_050219_2,12241, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12243 65.732 17.0 3335200.0 25 0 242360.0 + 31167 RLPEAIEEV 9 70 528.2902244617638 1054.5658959903276 2 528.2906982302666 MULTI CID FTMS 0 0 0 12242 3034105.0 0.1782641270606743 5 -0.41668701171875 1 Unmodified _RLPEAIEEV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 29.84058131909904 0.1515068451768857 4 [R{I|L}][EP]A{I|L}EEV 9 0 + 51.189 0.0 0.0 4.854 4.854 82.554 0.0 0.0 0.0 5.730010412434616 26.5500233001784 5.730010412434616 11.346985738974553 0 0.75 0.958607314841775 0.0 0.0 + + [R{I|L}][EP]A{I|L}EEV;{[QN]|[E{I|L}]|[KN]}[RP]A{I|L}EEV 4.854;3.778 +;- + 88 1 1.226 48865.1 1.0 7487 4754 12242 HBL1_DMSO_200M_050219_2,12243 HBL1_DMSO_200M_050219_2,12243,RLPEAIEEV False True RLPEAIEEV 65.732089 528.290698230267 1289358880.0 12242.0 ENST00000460882.5_1_9:37422710-37436776:+|nuORF;;ENST00000493368.5_1_9:37422710-37428742:+|nuORF;;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;;ENSG00000137106|ENST00000318158|GRHPR 7.387755711873372 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12244 65.733 21.0 3111800.0 25 0 444760.0 + 6113 DSVILRSI 8 60 451.76900955141673 901.5234661696336 2 451.7690917849541 MULTI CID FTMS 0 0 0 12242 2861412.75 1.0 0 0.0 2 Unmodified _DSVILRSI_ ENSG00000073734|ENST00000650372|ABCB11 58.6788170122104 0.1149141431586871 4 {[DS]|[MA]|[CV]|TT}V{I|L}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 8 2 + 53.461 0.0 0.0 5.93 5.93 90.64 0.0 0.0 0.0 40.784634594678266 15.796896906561033 15.796896906561033 53.460696996448576 0 1.274227503252014 0.0 0.805462187404089 0.4247425010840047 {[DS]|[MA]|[CV]|TT}V{I|L}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 5.93 - 60 + 1 1.226 59017.0 1.0 7488 4754 12242 HBL1_DMSO_200M_050219_2,12244 HBL1_DMSO_200M_050219_2,12244,DSVILRSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12245 65.734 30.0 2211100.0 25 0 323310.0 + 43998 YIDPSGFVKA 10 79 548.7875383952016 1095.5605238572032 2 548.7878295779228 MULTI CID FTMS 0 0 0 12242 1619298.875 0.600388298704602 -2 0.2044296264648437 3 Unmodified _YIDPSGFVKA_ ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48;nc|ENSG00000090686|Q86UV5-8|USP48 40.23920728925047 0.1550410903091231 4 Y{I|L}DPS 5 5 61.23 0.0 0.0 5.5889 0.0 0.0 0.0 517.2785738580686 517.2785738580686 49.01145969223869 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3807196863200844 0.0 + Y{I|L}DPS 5.5889 + + 398 + 1 1.226 52848.5 1.0 7489 4754 12242 HBL1_DMSO_200M_050219_2,12245 HBL1_DMSO_200M_050219_2,12245,YIDPSGFVKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12246 65.736 36.0 944950.0 25 0 79929.0 + 42963 VVSPSSFENV 10 70 532.7668853204997 1063.5192177077993 2 532.7668334841728 MULTI CID FTMS 0 0 0 12242 1370982.0 1.0 0 0.0 4 Unmodified _VVSPSSFENV_ ENSG00000070831|ENST00000656825|CDC42;nc|ENSG00000289694|P60953-1|CDC42 15.847184025352805 0.5816416552707754 4 VV{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}D 6 7 33.161 0.0 0.0 3.118 0.0 0.0 0.0 311.20699781938055 311.20699781938055 13.78022170376731 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.0 VV{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}D 3.118 - 149 1 1.226 35565.7 1.0 7490 4754 12242 HBL1_DMSO_200M_050219_2,12246 HBL1_DMSO_200M_050219_2,12246,VVSPSSFENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12247 65.737 48.0 787010.0 25 0 57131.0 42484 VTIEMNEPV 9 67 516.2557444846881 1030.496936036176 2 516.2557861208916 MULTI CID FTMS 0 0 0 12242 728553.5 0.1295831792218981 -4 0.448486328125 5 Unmodified _VTIEMNEPV_ ENSG00000132646|ENST00000379143|PCNA 16.942295170755138 0.3780752226737986 4 V 1 8 15.485 0.0 0.0 1.5026 0.0 0.0 913.4174891751394 0.0 913.4174891751394 0.0 -4.960762528683702 -4.960762528683702 0.0 0 0.0 0.0 0.0 0.0 + V 1.5026 + + 27 + 1 1.226 38864.2 1.0 7491 4754 12242 HBL1_DMSO_200M_050219_2,12247 HBL1_DMSO_200M_050219_2,12247,VTIEMNEPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12248 65.739 85.0 647620.0 25 0 113240.0 + 1384 ALAGEFIRA 9 77 474.2692509891252 946.5239490450504 2 474.2693969607353 MULTI CID FTMS 0 0 0 12242 541769.375 1.0 0 0.0 6 Unmodified _ALAGEFIRA_ ENSG00000089248|ENST00000261735|ERP29 26.020703789607367 0.2001090068861241 4 [{I|L}A]AGE{M(Oxidation (M))|F}{I|L} 7 2 60.762 0.0 0.0 6.4195 0.0 0.0 0.0 242.12629114322505 242.12629114322505 48.5438040893024 0.0 0.0 0.0 0 0.805462187404089 2.0 0.4247425010840047 0.0 + [{I|L}A]AGE{M(Oxidation (M))|F}{I|L} 6.4195 + + 120 + 1 1.226 46080.0 1.0 7492 4754 12242 HBL1_DMSO_200M_050219_2,12248 HBL1_DMSO_200M_050219_2,12248,ALAGEFIRA False True ALAGEFIRA 65.738816 474.269396960735 4663099.0 12242.0 ENSG00000089248|ENST00000261735|ERP29 5.204531828562419 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12249 65.741 76.0 487730.0 25 0 29733.0 + 39047 TVVEDGSLPQV 11 80 572.2986162844868 1142.5826796357735 2 572.2991210818291 MULTI CID FTMS 0 0 0 12242 406906.25 0.8639482254758234 1 -0.0849380493164062 7 Unmodified _TVVEDGSLPQV_ ENSG00000158526|ENST00000375151|TSR2 22.736283301280096 0.5583477779825423 4 {[TV]|[{I|L}S]}C(Carbamidomethyl (C)) 3 9 19.666 0.0 0.0 1.7212 0.0 0.0 0.0 779.4163948059485 779.4163948059485 2.703037561203842 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}C(Carbamidomethyl (C)) 1.7212 - 124 1 1.226 37127.3 1.0 7493 4754 12242 HBL1_DMSO_200M_050219_2,12249 HBL1_DMSO_200M_050219_2,12249,TVVEDGSLPQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12250 65.746 290.0 400520.0 25 0 34076.0 -1 RCHRRRRRCCC 11 109 866.9068741437397 1731.7991953542794 2 867.4094116091728 MULTI CID FTMS 0 0 0 12242 381215.0 0.7728735504597816 -2 0.2044296264648437 8 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 4 [NP]{I|L}NA[QP]QDAN{I|L}DP[EP] 16 -1 + 84.74 0.0 0.0 4.8932 4.8932 76.539 0.0 0.0 0.0 5.243240629703834 57.2614508626846 5.243240629703834 5.453776732812557 0 0.2614393726401688 1.2218487496163564 0.3807196863200844 1.2769763493273798 [NP]{I|L}NA[QP]QDAN{I|L}DP[EP];[MN]P[HV]RQDAN{I|L}DP[EP];[NP]{I|L}GGA[QP]QDAN{I|L}DP[EP];[NP]{I|L}NA[QP]QDAGG{I|L}DP[EP];[NP]{I|L}NA[QP][AG]DAN{I|L}DP[EP];[MN]PN{I|L}NWQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;[NP]{I|L}[TP][DP]QDAN{I|L}DP[EP];[NP]M[HV]RQDAN{I|L}DP[EP];[NP]{I|L}N[HS]{[TV]|[{I|L}S]}DAN{I|L}DP[EP];[NP]{I|L}NM[RH]DAN{I|L}DP[EP] 4.8932;4.5783;4.3727;4.3727;4.3727;4.2641;4.2288;4.1386;4.1106;4.104 -;-;-;-;-;-;-;-;-;- 4727 1 1.226 79534.6 1.0 7494 4754 12242 HBL1_DMSO_200M_050219_2,12250 HBL1_DMSO_200M_050219_2,12250,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12251 65.75 241.0 406090.0 25 0 37563.0 + 33312 SFVDYQTTM 9 141 546.2388973426018 1090.4632417520036 2 546.2402221560478 MULTI CID FTMS 0 0 0 12242 380594.59375 0.8527387985420782 -2 0.2044296264648437 9 Unmodified _SFVDYQTTM_ ENSG00000137076|ENST00000314888|TLN1;ENST00000486788.2_1_9:35704327-35706084:-|nuORF;nc|ENSG00000137076|Q9Y490-2|TLN1 26.88365393820708 0.1891292719743517 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VDY[NP]{[{M(Oxidation (M))|F}C]|[YS]} 9 3 + 33.592 0.0 0.0 3.0806 3.0806 63.943 0.0 0.0 0.0 13.50379364601566 0.4048498545736905 0.4048498545736905 1.3724324227584574 0 0.0 2.0 0.25 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VDY[NP]{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VDTG{[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VDT{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GT[PG][{M(Oxidation (M))|F}E]{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GT[DV]{[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GD{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}C]|[YS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[WE]{[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}C]|[YS]};[HM][NP]Y[TP]TM;[{I|L}T]C(Carbamidomethyl (C))DV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[{M(Oxidation (M))|F}C]|[YS]};[HM][NP]YAVEM 3.0806;2.9547;2.643;2.2385;2.2272;2.1102;1.9487;1.7751;1.7324;1.7003 -;-;-;-;-;-;-;-;-;- 1572 1 1.226 80136.9 1.0 7495 4754 12242 HBL1_DMSO_200M_050219_2,12251 HBL1_DMSO_200M_050219_2,12251,SFVDYQTTM False True SFVDYQTTM 65.750447 546.240222156048 3034540.75 12242.0 ENST00000486788.2_1_9:35704327-35706084:-|nuORF;;nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 5.849817117055257 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12252 65.754 213.0 504050.0 25 0 122800.0 -1 0 116 376.2240045663634 375.2167280997634 1 376.2226745486259 MULTI CID FTMS 0 0 0 12242 291137.34375 0.0441513445817621 19 -1.7119140625 10 4 {I|L}M{I|L} 3 -1 + 45.328 0.0 0.0 12.081 12.081 95.118 0.0 0.0 0.0 21.81629275841013 11.73393743112328 11.73393743112328 9.399852147127504 0 0.5151201868453454 1.6989700043360187 0.0 0.0 {I|L}M{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L};{M(Oxidation (M))|F}P{I|L};[{I|L}P]{M(Oxidation (M))|F} 12.081;9.5754;8.799;6.1233 -;-;-;- 20 + 1 1.226 88309.9 1.0 7496 4754 12242 HBL1_DMSO_200M_050219_2,12252 HBL1_DMSO_200M_050219_2,12252, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12253 65.759 244.0 379440.0 25 0 64506.0 + 36474 TAASVLRI 8 112 415.75848804967376 829.5024231661475 2 415.7584106326103 MULTI CID FTMS 0 0 0 12242 276590.0 0.2104496679172871 -3 0.3365859985351562 11 Unmodified _TAASVLRI_ ENSG00000119574|ENST00000594051|ZBTB45 58.6788170122104 0.1149141431586871 4 TAASV{I|L}R{I|L} 8 0 + 87.75 0.0 0.0 10.579 10.579 96.669 0.0 0.0 0.0 76.9126468718659 14.614014465289657 14.614014465289657 13.84643433451714 0 0.9247425010840048 2.0 0.4247425010840047 0.5941876774005248 + + TAASV{I|L}R{I|L};TAAS{I|L}VR{I|L};TAA{I|L}SVR{I|L};TA{I|L}[SG]{I|L}R{I|L};TA{I|L}ASVR{I|L};T[QT]V{I|L}R{I|L};T[QT]{I|L}VR{I|L} 10.579;8.9094;8.9094;8.4996;8.365;3.8704;2.2012 +;-;-;-;-;-;- + 194 + 1 1.226 77396.2 1.0 7497 4754 12242 HBL1_DMSO_200M_050219_2,12253 HBL1_DMSO_200M_050219_2,12253,TAASVLRI True True TAASVLRI 65.75902 415.75841063261 19578768.0 12242.0 ENSG00000119574|ENST00000594051|ZBTB45 3.155949910481771 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12254 65.762 173.0 450780.0 25 0 66651.0 21524 LPIPMLLV 8 93 448.2890947448802 894.5636365565605 2 448.2897827029228 MULTI CID FTMS 0 0 0 12242 261377.765625 0.8650861979357094 -1 0.1220169067382812 12 Unmodified _LPIPMLLV_ ENSG00000171133|ENST00000302681|OR2K2 52.33426049586781 0.1282678332820461 4 [{I|L}P]R{[QG]|[NA]}{I|L}{I|L}V 8 3 + 36.889 0.0 0.0 4.1237 4.1237 78.806 0.0 0.0 0.0 0.0224312040523244 12.196596782814808 0.0224312040523244 9.262137858390812 0 0.8807196863200843 1.5228787452803376 0.0 0.0 [{I|L}P]R{[QG]|[NA]}{I|L}{I|L}V;[{I|L}P][VG]{[QG]|[NA]}{I|L}{I|L}V;[PA]VV{[QG]|[NA]}{I|L}{I|L}V 4.1237;3.0883;0.45477 -;-;- 67 1 1.226 67658.2 1.0 7498 4754 12242 HBL1_DMSO_200M_050219_2,12254 HBL1_DMSO_200M_050219_2,12254,LPIPMLLV True True LPNRALLV 65.762389 448.289782702923 2283224.0 12242.0 ENSG00000171608|ENST00000377346|PIK3CD;;PIK3CD|p.S199G|1|0.14|ENSG00000171608|chr1:9716073-9716073|A/G|missense_variant;;nc|ENSG00000171608|O00329-2|PIK3CD 2.787258585294088 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12255 65.765 115.0 425660.0 25 0 22654.0 + 13441 HLPSDFTPAV 10 99 542.2765450750989 1082.5385372169976 2 542.2768432497978 MULTI CID FTMS 0 0 0 12242 225563.6875 0.7756544644116926 -3 0.3365859985351562 13 Unmodified _HLPSDFTPAV_ CON__P01966 34.10243960390752 0.2198439752719791 4 [DP]S[H{I|L}]{M(Oxidation (M))|F}T 7 7 21.659 0.0 0.0 2.0007 0.0 0.0 0.0 282.1447743598289 282.1447743598289 8.894659527589013 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.8252574989159953 0.0 [DP]S[H{I|L}]{M(Oxidation (M))|F}T 2.0007 - 91 1 1.226 45361.2 1.0 7499 4754 12242 HBL1_DMSO_200M_050219_2,12255 HBL1_DMSO_200M_050219_2,12255,HLPSDFTPAV False True HLPSDFTPAV 65.764805 542.276843249798 3241669.0 12242.0 P01966 6.445818265279134 2.0 True 10.0 False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 12256 65.769 224.0 376850.0 25 0 46397.0 + 37014 TFPNGVKGL 9 112 466.7638337295896 931.5131145259792 2 466.7638122439384 MULTI CID FTMS 0 0 0 12242 225672.078125 0.3001275525365088 9 -0.7718505859375 14 Unmodified _TFPNGVKGL_ ENSG00000242612|ENST00000219481|DECR2;ENST00000439661.5_1_16:457533-461575:+|nuORF;nc|ENSG00000242612|Q9NUI1-3|DECR2 20.453626601364224 0.2830276176381075 4 [{M(Oxidation (M))|F}T]PN[VG]KAV 9 2 + 27.558 0.0 0.0 2.9585 2.9585 70.659 0.0 0.0 0.0 6.795854303133691 5.740312677277188 5.740312677277188 5.740312677277188 0 0.4247425010840047 0.0 0.0 0.0 [{M(Oxidation (M))|F}T]PN[VG]KAV;[{M(Oxidation (M))|F}T]PN[VG]KG{I|L};[{M(Oxidation (M))|F}T]PGG[VG]KAV;[{M(Oxidation (M))|F}T]PGG[VG]KG{I|L};[NP]GVV[VG]P{[HG]|PP} 2.9585;2.3422;1.9699;1.3537;0.7636 -;+;-;-;- + 174 + 1 1.226 70116.8 1.0 7500 4754 12242 HBL1_DMSO_200M_050219_2,12256 HBL1_DMSO_200M_050219_2,12256,TFPNGVKGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12257 65.771 65.0 670880.0 25 0 45534.0 + + -1 RLLENMTEV 9 90 552.2563770564974 1102.4982011797947 2 552.7576782107353 MULTI CID FTMS 0 0 0 12242 206373.984375 0.5139818699863853 -2 0.2044296264648437 15 Carbamidomethyl (C) _MPLLFGC(Carbamidomethyl (C))EH_ nc|ENSG00000179889|Q6P996-4|PDXDC1;ENSG00000179889|ENST00000396410|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;nc|ENSG00000179889|Q6P996-3|PDXDC1 16.942295170755138 0.3780752226737986 4 MP{I|L} 3 -1 33.276 0.0 0.0 3.0183 0.0 0.0 0.0 758.2977388971311 758.2977388971311 9.348331157524967 0.0 0.0 0.0 0 0.6109243748081782 1.3979400086720375 0.0 0.0 MP{I|L} 3.0183 + + 106 + 1 1.226 41616.2 1.0 7501 4754 12242 HBL1_DMSO_200M_050219_2,12257 HBL1_DMSO_200M_050219_2,12257,MPLLFGCEH False False RLLENMTEV 65.770601 552.757678210735 2770132.25 12242.0 nc|ENSG00000179889|Q6P996-4|PDXDC1;;ENSG00000179889|ENST00000396410|PDXDC1;;nc|ENSG00000179889|Q6P996-5|PDXDC1;;nc|ENSG00000179889|Q6P996-3|PDXDC1 5.6913251876831055 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12258 65.784 800.0 242950.0 25 0 19432.0 32926 SEKWVLDSI 9 215 538.7859631103044 1075.5573732874086 2 538.7845947146416 MULTI CID FTMS 0 0 0 12242 191581.703125 0.3808674420922076 2 -0.1465301513671875 16 Unmodified _SEKWVLDSI_ ENSG00000147316|ENST00000344683|MCPH1 22.736283301280096 0.2418982879461534 4 [{I|L}T]Q[C(Carbamidomethyl (C))Q]VKS{I|L} 9 7 + 53.669 0.0 0.0 4.9899 4.9899 68.506 0.0 0.0 0.0 9.122119270932238 10.846755565910442 9.122119270932238 0.4845500650402812 0 0.4247425010840047 2.0 0.5114393726401688 0.3494850021680094 [{I|L}T]Q[C(Carbamidomethyl (C))Q]VKS{I|L};[{I|L}T][WD]DVKS{I|L};[{I|L}T][WD]KVDS{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}DVKS{I|L};[{I|L}T]QK{[{M(Oxidation (M))|F}H]|[RQ]}CS{I|L};[{I|L}T]QV{[DS]|[MA]|[CV]|TT}VDS{I|L};[{I|L}T]{[WS]|[C(Carbamidomethyl (C)){I|L}]}RVDS{I|L};[{I|L}T]QV[C(Carbamidomethyl (C))Q]KS{I|L};[{I|L}T][AG][C(Carbamidomethyl (C))Q]VKS{I|L};{[TV]|[{I|L}S]}D[WE]VKS{I|L} 4.9899;4.9448;4.225;4.1417;4.0985;4.0916;3.9451;3.9201;3.8088;3.5488 -;-;-;-;-;-;-;-;-;- 5063 1 1.226 153213.7 0.9700000286102296 7502 4754 12242 HBL1_DMSO_200M_050219_2,12258 HBL1_DMSO_200M_050219_2,12258,SEKWVLDSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12259 65.793 459.0 458550.0 25 0 72978.0 192 AAPHGPGA 8 199 339.17151588513445 676.3284788370689 2 339.1705505251884 MULTI CID FTMS 0 0 0 12242 193019.171875 0.69224383974264 -1 0.1220169067382812 17 Unmodified _AAPHGPGA_ ENSG00000174963|ENST00000383075|ZIC4;ENST00000493664.5_1_3:147108719-147114575:-|nuORF;nc|ENSG00000174963|Q8N9L1-2|ZIC4;nc|ENSG00000174963|Q8N9L1-3|ZIC4;nc|ENSG00000174963|Q8N9L1-5|ZIC4 0.7936320650641473 0.8195151834710337 4 {I|L}{I|L}P 3 7 45.66 0.0 0.0 6.7511 0.0 0.0 0.0 350.08515697472603 350.08515697472603 33.69162604985766 0.0 0.0 0.0 0 0.4857737871658818 2.0 0.0 0.0 {I|L}{I|L}P 6.7511 - 70 + 1 1.226 163947.2 1.0 7503 4754 12242 HBL1_DMSO_200M_050219_2,12259 HBL1_DMSO_200M_050219_2,12259,AAPHGPGA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12260 65.795 71.0 544800.0 25 0 39390.0 + 14465 IGACLAILSL 10 72 487.28968303235695 972.564813131514 2 488.7939025759697 MULTI CID FTMS 0 0 0 12242 180094.390625 0.9093941039343976 -1 0.1220169067382812 18 Unmodified _IGACLAILSL_ ENSG00000070886|ENST00000166244|EPHA8;nc|ENSG00000070886|P29322-2|EPHA8 16.942295170755138 0.5632667538960775 4 {[TV]|[{I|L}S]}V 3 8 22.932 0.0 0.0 2.3579 0.0 0.0 0.0 670.3586113095014 670.3586113095014 -2.589869102636157 0.0 -2.589869102636157 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[TV]|[{I|L}S]}V 2.3579 - 47 1 1.226 38957.5 1.0 7504 4754 12242 HBL1_DMSO_200M_050219_2,12260 HBL1_DMSO_200M_050219_2,12260,IGACLAILSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12261 65.799 169.0 402980.0 25 0 59643.0 + 1650 ALNDHFVKL 9 95 352.8651445159861 1055.5736041481584 3 352.8657104372978 MULTI CID FTMS 0 0 0 12242 140054.140625 0.4478487835563134 -1 0.1220169067382812 19 Unmodified _ALNDHFVKL_ ENSG00000111640|ENST00000229239|GAPDH;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;ENST00000466525.1_1_12:6646524-6647333:+|nuORF;nc|ENSG00000111640|P04406-2|GAPDH 32.30548876998284 0.1201446275138228 4 [{I|L}A][DN]H{M(Oxidation (M))|F}VK{I|L} 9 0 + 40.072 0.0 0.0 3.7962 3.7962 68.221 0.0 0.0 0.0 13.543704980708526 7.323937598229676 7.323937598229676 2.7300127206373688 0 0.4247425010840047 1.6989700043360187 0.0 0.7742275032520141 + + [{I|L}A][DN]H{M(Oxidation (M))|F}VK{I|L};[{I|L}A]{I|L}[HV][C(Carbamidomethyl (C))C]K{I|L};[{I|L}A][DN]H{M(Oxidation (M))|F}V{I|L}K;[{I|L}A]{I|L}[HV][C(Carbamidomethyl (C))C]{I|L}K;{[{M(Oxidation (M))|F}H]|[RQ]}DNV{I|L}RR;[HD]N{M(Oxidation (M))|F}V{I|L}RR;[HD]{M(Oxidation (M))|F}NV{I|L}RR;{[{M(Oxidation (M))|F}H]|[RQ]}DN{I|L}VRR;[HD]N{M(Oxidation (M))|F}{I|L}VRR;{[{M(Oxidation (M))|F}H]|[RQ]}DGGV{I|L}RR 3.7962;3.5376;3.1024;2.8438;2.5131;2.359;2.1096;1.9198;1.7657;1.6357 +;-;-;-;-;-;-;-;-;- + 222 + 1 1.226 60546.2 1.0 7505 4754 12242 HBL1_DMSO_200M_050219_2,12261 HBL1_DMSO_200M_050219_2,12261,ALNDHFVKL True True ALNDHFVKL 65.798709 352.865710437298 2089260.625 12242.0 nc|ENSG00000111640|P04406-2|GAPDH;;ENST00000466525.1_1_12:6646524-6647333:+|nuORF;;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;;ENSG00000111640|ENST00000229239|GAPDH 7.526044209798177 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12262 65.813 800.0 158320.0 25 0 14106.0 + -1 YYGPMCDQCQ 10 129 640.7251335152071 1279.435714097214 2 640.7260619997978 MULTI CID FTMS 0 0 0 12242 130634.0546875 1.0 0 0.0 20 Carbamidomethyl (C),Oxidation (M) _YYGPM(Oxidation (M))C(Carbamidomethyl (C))DQCQ_ REV__ENSG00000107518|ENST00000355044|ATRNL1 17.11289562659939 0.5604042439455784 4 YYYD 4 -1 54.897 0.0 0.0 4.2907 0.0 0.0 0.0 672.1933334199737 672.1933334199737 42.13279059031297 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.9247425010840048 0.0 YYYD 4.2907 - 180 + 1 1.226 96390.2 0.7900000214576721 7506 4754 12242 HBL1_DMSO_200M_050219_2,12262 HBL1_DMSO_200M_050219_2,12262,YYGPMCDQCQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12264 65.817 4.7 14841000.0 25 0 2896900.0 + 44615 YPFKPPKI 8 72 330.5324354067559 988.5754768204677 3 330.5322143435478 MULTI CID FTMS 0 0 0 12263 9542403.0 0.873772653993866 1 -0.0615921020507812 1 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 21.74664581756881 0.5868176546531598 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 50.334 0.0 0.0 5.0915 5.0915 79.852 0.0 0.0 0.0 24.927685683238263 8.598002604811242 8.598002604811242 7.825160557860926 0 0.0 0.958607314841775 0.0 0.2134679910804404 + + YP{M(Oxidation (M))|F}KPPK{I|L};Y{I|L}MKPPK{I|L} 5.0915;4.3 +;- + 118 + 1 1.236 60675.4 1.0 7507 4755 12263 HBL1_DMSO_200M_050219_2,12264 HBL1_DMSO_200M_050219_2,12264,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12265 65.818 21.0 2346400.0 25 0 347080.0 + 44812 YPNKYESII 9 73 563.7929533723128 1125.5713538114255 2 563.7928954958916 MULTI CID FTMS 0 0 0 12263 2671902.25 1.0 0 0.0 2 Unmodified _YPNKYESII_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 38.17557092003332 0.0854718145212029 4 [NP]KYESY{I|L}{I|L} 9 2 + 54.931 0.0 0.0 4.8803 4.8803 69.678 0.0 0.0 0.0 1.268732363854994 14.09256854528806 1.268732363854994 1.268732363854994 0 0.7302046884880937 0.0 0.9247425010840048 0.0 [NP]KYESY{I|L}{I|L};{[TV]|[{I|L}S]}HH{M(Oxidation (M))|F}PY{I|L}{I|L};{[TV]|[{I|L}S]}[KC]AESY{I|L}{I|L};[NP]KYEYS{I|L}{I|L};{[TV]|[{I|L}S]}HH{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}{I|L};{[TV]|[{I|L}S]}[KC]AEYS{I|L}{I|L};[NP]KYES{I|L}Y{I|L};{[TV]|[{I|L}S]}HH{M(Oxidation (M))|F}P{I|L}Y{I|L};{[TV]|[{I|L}S]}[KC]AES{I|L}Y{I|L};[YE]{[ET]|[MV]}VPY{I|L}{I|L} 4.8803;4.7676;4.6566;4.2796;4.1669;4.0559;3.9465;3.8338;3.7228;3.2739 -;-;-;-;-;-;-;-;-;- 526 1 1.236 44044.7 1.0 7508 4755 12263 HBL1_DMSO_200M_050219_2,12265 HBL1_DMSO_200M_050219_2,12265,YPNKYESII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12266 65.82 52.0 973360.0 25 0 146610.0 262 ADARLLWI 8 88 479.27739840107984 956.5402438689596 2 479.2776977419853 MULTI CID FTMS 0 0 0 12263 773772.6875 0.4565987239656922 8 -0.6869125366210938 3 Unmodified _ADARLLWI_ ENST00000533331.5_1_11:14535061-14541920:-|nuORF 9.347437153973935 0.7675937258251505 4 Y{I|L} 2 7 13.188 0.0 0.0 1.3787 0.0 0.0 662.3821455797004 0.0 662.3821455797004 0.0 3.654696052055302 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 1.3787 - 18 + 1 1.236 43391.4 1.0 7509 4755 12263 HBL1_DMSO_200M_050219_2,12266 HBL1_DMSO_200M_050219_2,12266,ADARLLWI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12267 65.822 91.0 587740.0 25 0 97345.0 + 45925 YYYDGDIGNY 10 80 621.7513017931685 1241.488050653137 2 621.7517578005791 MULTI CID FTMS 0 0 0 12263 671200.3125 0.7223642917373165 1 -0.0615921020507812 4 Unmodified _YYYDGDIGNY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 34.10243960390752 0.2198439752719791 4 {[YD]|[{M(Oxidation (M))|F}M]}GDYY 6 5 25.648 0.0 0.0 2.0659 0.0 0.0 0.0 462.20066469409466 462.20066469409466 10.163800089887545 0.0 0.0 0.0 0 0.0 0.0 1.024227503252014 0.0 {[YD]|[{M(Oxidation (M))|F}M]}GDYY 2.0659 - 245 1 1.236 45624.0 1.0 7510 4755 12263 HBL1_DMSO_200M_050219_2,12267 HBL1_DMSO_200M_050219_2,12267,YYYDGDIGNY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12268 65.823 73.0 824490.0 25 0 98594.0 17484 KPGEIAPL 8 99 412.74647771628827 823.4784024993766 2 412.7460815310478 MULTI CID FTMS 0 0 0 12263 665985.375 0.8006889863622899 2 -0.111846923828125 5 Unmodified _KPGEIAPL_ ENSG00000170909|ENST00000358375|OSCAR;nc|ENSG00000170909|Q8IYS5-2|OSCAR;nc|ENSG00000170909|Q8IYS5-3|OSCAR;nc|ENSG00000170909|Q8IYS5-4|OSCAR;nc|ENSG00000170909|Q8IYS5-5|OSCAR;nc|ENSG00000170909|Q8IYS5-6|OSCAR;nc|ENSG00000170909|Q8IYS5-7|OSCAR;nc|ENSG00000170909|Q8IYS5|OSCAR 4.3292370932331545 0.7980541185046766 4 K 1 7 3.0989 0.0 0.0 0.37632 0.0 0.0 373.1836464952734 319.1777742975219 692.3614207927953 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.37632 + + 15 + 1 1.236 52525.3 1.0 7511 4755 12263 HBL1_DMSO_200M_050219_2,12268 HBL1_DMSO_200M_050219_2,12268,KPGEIAPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12269 65.825 72.0 839740.0 25 0 116470.0 + 5770 DPPIARLSV 9 76 484.2819848983448 966.5494168634896 2 484.2824584841728 MULTI CID FTMS 0 0 0 12263 651610.0625 0.5436635566340312 -3 0.28936767578125 6 Unmodified _DPPIARLSV_ ENSG00000089597|ENST00000356638|GANAB;ENST00000524437.5_1_11:62402291-62406896:-|nuORF;ENST00000526210.1_1_11:62402291-62407104:-|nuORF;nc|ENSG00000089597|Q14697-2|GANAB 34.93206674587334 0.1032771302489716 4 DPP{I|L}A 5 4 64.068 0.0 0.0 6.6285 0.0 0.0 0.0 470.27314172916255 470.27314172916255 43.85151878060192 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + DPP{I|L}A 6.6285 + + 62 + 1 1.236 51354.5 1.0 7512 4755 12263 HBL1_DMSO_200M_050219_2,12269 HBL1_DMSO_200M_050219_2,12269,DPPIARLSV True True DPPIARLSV 65.824984 484.282458484173 20311982.0 12263.0 ENST00000526210.1_1_11:62402291-62407104:-|nuORF;;nc|ENSG00000089597|Q14697-2|GANAB;;ENST00000524437.5_1_11:62402291-62406896:-|nuORF;;ENSG00000089597|ENST00000356638|GANAB 6.113118966420491 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12270 65.828 172.0 401340.0 25 0 22588.0 -1 0 80 917.4333386407358 0 917.4333373904228 PEAK CID FTMS 0 0 0 12263 364882.96875 0.1622105086330337 -3 0.28936767578125 7 4 PN{I|L}NEA[H{I|L}]R{I|L}M 11 -1 45.099 0.0 0.0 2.4606 0.0 0.0 245.08629598176785 296.08869348697505 541.1749894687429 0.0 0.0 0.0 0.0 0 0.6307196863200843 0.0 0.0 0.4247425010840047 PN{I|L}NEA[H{I|L}]R{I|L}M 2.4606 - 648 + 1 1.236 52453.4 1.0 7513 4755 12263 HBL1_DMSO_200M_050219_2,12270 HBL1_DMSO_200M_050219_2,12270, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12271 65.836 402.0 511990.0 25 0 59446.0 + 2725 ATHGRFLEI 9 190 348.52618137837345 1042.5567147353204 3 348.5259887576103 MULTI CID FTMS 0 0 0 12263 271662.0625 0.2125080131871931 -3 0.28936767578125 8 Unmodified _ATHGRFLEI_ ENSG00000169710|ENST00000306749|FASN 16.149105407346934 0.3995459350917656 4 {M(Oxidation (M))|F}HTA{I|L} 5 7 30.177 0.0 0.0 2.8945 0.0 0.0 455.2401905744157 0.0 455.2401905744157 0.0 10.206808544614605 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}HTA{I|L} 2.8945 - 897 1 1.236 167080.4 1.0 7514 4755 12263 HBL1_DMSO_200M_050219_2,12271 HBL1_DMSO_200M_050219_2,12271,ATHGRFLEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12272 65.837 73.0 613170.0 25 0 38101.0 + 43887 YFRPIDTTM 9 89 572.2784391958983 1142.5423254585965 2 572.2786743044853 MULTI CID FTMS 0 0 0 12263 172682.5625 0.3862931768020609 -1 0.0849380493164062 9 Unmodified _YFRPIDTTM_ ENSG00000088992|ENST00000335209|TESC;nc|ENSG00000088992|Q96BS2-2|TESC;nc|ENSG00000088992|Q96BS2-3|TESC 45.69961567697781 0.0497987121815769 4 [Y{M(Oxidation (M))|F}]R[{I|L}P]DTTM 9 0 + 53.121 0.0 0.0 4.6494 4.6494 82.474 0.0 0.0 0.0 3.65279269351241 38.640530381629645 3.65279269351241 13.317562352075775 0 1.1989700043360187 0.0 0.9247425010840048 0.0 + + [Y{M(Oxidation (M))|F}]R[{I|L}P]DTTM;{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[R{I|L}]TTM;[Y{M(Oxidation (M))|F}][DP][R{I|L}]TTM;{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}[NP]M;[Y{M(Oxidation (M))|F}]R[{I|L}P][WM]M;[Y{M(Oxidation (M))|F}]R[{I|L}P]DG[{M(Oxidation (M))|F}E];[QP]G[PS][{I|L}P]D[W{M(Oxidation (M))|F}];[PA]GG[PS][{I|L}P]D[W{M(Oxidation (M))|F}];{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[R{I|L}]G[{M(Oxidation (M))|F}E];[PA]N[PS][{I|L}P]D[W{M(Oxidation (M))|F}] 4.6494;3.4838;2.7448;2.1686;1.853;1.5647;0.95534;0.61941;0.39914;0.043869 +;-;-;-;-;-;-;-;-;- + 255 1 1.236 39649.4 1.0 7515 4755 12263 HBL1_DMSO_200M_050219_2,12272 HBL1_DMSO_200M_050219_2,12272,YFRPIDTTM True True YFRPIDTTM 65.837274 572.278674304485 3252464.25 12263.0 nc|ENSG00000088992|Q96BS2-3|TESC;;ENSG00000088992|ENST00000335209|TESC;;nc|ENSG00000088992|Q96BS2-2|TESC 5.702591896057129 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12273 65.851 800.0 103910.0 25 0 4797.4 + 35687 VYLDRGTGNVSF 12 128 664.3338888158612 1326.6532246985223 2 664.3340331912041 MULTI CID FTMS 0 0 0 12263 139488.296875 1.0 0 0.0 10 Unmodified _SVEYQGVRKDF_ nc|ENSG00000146833|Q9C037|TRIM4;ENSG00000146833|ENST00000349062|TRIM4 28.49450938151212 0.4231428536161201 4 [YV]Q{[WS]|[C(Carbamidomethyl (C)){I|L}]}VVNVS{M(Oxidation (M))|F} 11 8 + 53.631 0.0 0.0 4.0426 4.0426 66.088 0.0 0.0 0.0 9.285084027052656 19.260559403287125 9.285084027052656 1.1034854386204174 0 1.305462187404089 1.6989700043360187 0.4247425010840047 0.0 [YV]Q{[WS]|[C(Carbamidomethyl (C)){I|L}]}VVNVS{M(Oxidation (M))|F};[YV]Q[WH]YVVS{M(Oxidation (M))|F};[YV][HD][KA]YVVS{M(Oxidation (M))|F};[YV]Q{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[NV]|[RG]}VVS{M(Oxidation (M))|F};[YV]Q[WH]VYVS{M(Oxidation (M))|F};[YV][HD][KA]VYVS{M(Oxidation (M))|F};[YV]Q{[WS]|[C(Carbamidomethyl (C)){I|L}]}RRVS{M(Oxidation (M))|F};[YV]Q{[WS]|[C(Carbamidomethyl (C)){I|L}]}VVNW{M(Oxidation (M))|F};[HT]{M(Oxidation (M))|F}E[KA]YVVS{M(Oxidation (M))|F};[YV]Q[RV]{[ES]|[DT]|[{I|L}C]}NVS{M(Oxidation (M))|F} 4.0426;3.9594;3.9056;3.8157;3.7325;3.6787;3.5469;3.397;3.2976;3.2686 -;-;-;-;-;-;-;-;-;- 1318 1 1.236 66104.3 0.8299999833106995 7516 4755 12263 HBL1_DMSO_200M_050219_2,12273 HBL1_DMSO_200M_050219_2,12273,SVEYQGVRKDF False False VYLDRGTGNVSF 65.851111 664.334033191204 589495.6875 12263.0 nc|ENSG00000146833|Q9C037|TRIM4;;ENSG00000146833|ENST00000349062|TRIM4 6.770107746124268 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12274 65.86 525.0 177660.0 25 0 15904.0 + 40165 VGPFVSKI 8 126 423.7575507485072 845.5005485638144 2 423.7577697634697 MULTI CID FTMS 0 0 0 12263 122769.5078125 1.0 0 0.0 11 Unmodified _VGPFVSKI_ ENSG00000148090|ENST00000375731|AUH 34.40172386719151 0.3279500639400574 4 VG{I|L}MVSK{I|L} 8 2 + 71.325 0.0 0.0 8.4358 8.4358 79.704 0.0 0.0 0.0 45.638538378713065 12.730012720637376 12.730012720637376 0.4845500650402812 0 0.5994850021680094 1.6989700043360187 0.3494850021680094 0.0 VG{I|L}MVSK{I|L};VGP{M(Oxidation (M))|F}VSK{I|L};VG{I|L}MV[KT]V;VGP{M(Oxidation (M))|F}V[KT]V;VGP[KS][{M(Oxidation (M))|F}V]{I|L};VG{I|L}[QA][{M(Oxidation (M))|F}V]{I|L};RRR[{M(Oxidation (M))|F}V]{I|L} 8.4358;8.3785;6.7574;6.7001;4.4786;4.1226;1.3196 -;+;-;-;-;-;- + 224 + 1 1.236 76615.2 1.0 7517 4755 12263 HBL1_DMSO_200M_050219_2,12274 HBL1_DMSO_200M_050219_2,12274,VGPFVSKI False True VGPFVSKI 65.860345 423.75776976347 1192665.375 12263.0 ENSG00000148090|ENST00000375731|AUH 3.2880629698435464 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12275 65.874 800.0 257550.0 25 0 19978.0 -1 0 208 334.72665104705254 667.4387491609051 2 334.7261230349541 MULTI CID FTMS 0 0 0 12263 97846.8984375 0.4395899814615805 -4 0.4215240478515625 12 4 AV{I|L}{I|L}RP 6 -1 + 65.755 0.0 0.0 9.8519 9.8519 86.369 0.0 0.0 0.0 34.69273760456403 3.170181010481116 3.170181010481116 3.170181010481116 0 0.4247425010840047 2.0 0.0 0.6382104921644451 AV{I|L}{I|L}RP;AV{I|L}{I|L}PR;AV{I|L}R{I|L}P 9.8519;9.3769;7.4198 -;-;- 114 + 1 1.236 165597.8 0.4699999988079071 7518 4755 12263 HBL1_DMSO_200M_050219_2,12275 HBL1_DMSO_200M_050219_2,12275, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12277 65.879 14.0 4696400.0 25 0 483610.0 + 44621 YPFKPPKI 8 73 495.2945804491195 988.574607965039 2 495.2948181033134 MULTI CID FTMS 0 0 0 12276 3738419.75 0.8114398325122715 2 -0.150543212890625 1 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 44.40701690623563 0.1655546087385432 4 YP{M(Oxidation (M))|F}KPPK{I|L} 8 0 + 63.402 0.0 0.0 6.4134 6.4134 75.546 0.0 0.0 0.0 38.5070171536541 4.913894895705866 4.913894895705866 1.0914446942506757 0 0.6549471895720985 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPK{I|L};YP{M(Oxidation (M))|F}KPKP{I|L};Y{I|L}MKPPK{I|L};Y{I|L}MKPKP{I|L} 6.4134;6.303;3.8271;3.7167 +;-;-;- + 168 + 1 1.236 57972.1 1.0 7519 4756 12276 HBL1_DMSO_200M_050219_2,12277 HBL1_DMSO_200M_050219_2,12277,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12278 65.88 25.0 1907500.0 25 0 167030.0 + 24856 MPLVKSVTV 9 87 487.28968303235695 972.564813131514 2 487.2906066775322 MULTI CID FTMS 0 0 0 12276 1957423.125 0.6031598729940391 2 -0.150543212890625 2 Unmodified _MPLVKSVTV_ ENSG00000164307|ENST00000443439|ERAP1;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1 49.55428908609986 0.0413471690215031 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}V[KS]VTV 9 0 + 50.014 0.0 0.0 5.1425 5.1425 74.972 0.0 0.0 0.0 0.8696026259784162 21.58075852926885 0.8696026259784162 3.4678748622465605 0 2.0682503180159344 1.6989700043360187 0.0 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}{I|L}V[KS]VTV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}V[WK]TV;[{I|L}P]MV[KS]VTV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[WK]VTV;[{I|L}P]VM[KS]VTV;{[TV]|[{I|L}S]}VWG{I|L}VTV;{[QV]|[N{I|L}]|[RA]|[KV]}[WE]{I|L}VTV;[VS]{I|L}WG{I|L}VTV;{[QV]|[N{I|L}]|[RA]|[KV]}S[{I|L}V]PMTV;[VS]K[{I|L}V]PMTV 5.1425;4.7859;4.6021;4.2718;3.7785;3.0683;1.3465;1.0807;0.9002;0.40506 +;-;-;-;-;-;-;-;-;- + 201 1 1.236 40800.9 1.0 7520 4756 12276 HBL1_DMSO_200M_050219_2,12278 HBL1_DMSO_200M_050219_2,12278,MPLVKSVTV True True MPLVKSVTV 65.879805 487.290606677532 25676006.0 12276.0 nc|ENSG00000164307|Q9NZ08-2|ERAP1;;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;;ENSG00000164307|ENST00000443439|ERAP1 6.862776756286621 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12279 65.881 19.0 2571500.0 25 0 431490.0 + 33531 SILEHQIQV 9 73 533.798702295969 1065.5828516587378 2 533.7985717654228 MULTI CID FTMS 0 0 0 12276 2560208.0 0.5363159012705884 -2 0.1465301513671875 3 Unmodified _SILEHQIQV_ ENSG00000104738|ENST00000649973|MCM4 41.8396318013385 0.0653578398400075 4 [HQ]E{I|L}{I|L}S{I|L}QV 9 6 + 42.954 0.0 0.0 4.0311 4.0311 69.327 0.0 0.0 0.0 3.010299956639805 9.889917747712644 3.010299956639805 3.010299956639805 0 0.5796896906561032 0.0 0.3054621874040891 0.0 [HQ]E{I|L}{I|L}S{I|L}QV;{[YC]|[HE]}Q{I|L}{I|L}S{I|L}QV;{[YC]|[HE]}{I|L}Q{I|L}S{I|L}QV;[HQ]{I|L}E{I|L}S{I|L}QV;{[YC]|[HE]}[AG]{I|L}{I|L}S{I|L}QV;{[YC]|[HE]}{I|L}[AG]{I|L}S{I|L}QV;[HQ]{I|L}T{I|L}D{I|L}QV;{[YC]|[HE]}{I|L}{[TV]|[{I|L}S]}Q{I|L}QV;[HQ]E{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}[KA];{[YC]|[HE]}Q{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}[KA] 4.0311;3.7486;3.7444;3.4619;2.8844;2.8802;2.4491;1.8195;1.5621;1.2796 -;-;-;-;-;-;-;-;-;- 205 1 1.236 44834.9 1.0 7521 4756 12276 HBL1_DMSO_200M_050219_2,12279 HBL1_DMSO_200M_050219_2,12279,SILEHQIQV True True SILEHQIQV 65.880984 533.798571765423 33535086.0 12276.0 ENSG00000104738|ENST00000649973|MCM4 3.993260463078817 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12280 65.882 31.0 1924800.0 25 0 382860.0 + 3031 AVLDLVHSA 9 72 462.7617359979682 923.5089190627364 2 462.7612792849541 MULTI CID FTMS 0 0 0 12276 1835151.5 0.8442170843471153 1 -0.0502548217773437 4 Unmodified _AVLDLVHSA_ ENSG00000142544|ENST00000421832|CTU1;ENST00000598755.1_1_19:52104581-52104959:+|nuORF 50.855029805455786 0.0384952370514206 4 {[VA]|[{I|L}G]}{I|L}D{I|L}V 6 3 56.401 0.0 0.0 6.1072 0.0 0.0 0.0 310.1158887471796 310.1158887471796 24.51667520279372 0.0 0.0 0.0 0 0.75 2.0 0.3494850021680094 0.0 + {[VA]|[{I|L}G]}{I|L}D{I|L}V 6.1072 + + 315 + 1 1.236 51704.5 1.0 7522 4756 12276 HBL1_DMSO_200M_050219_2,12280 HBL1_DMSO_200M_050219_2,12280,AVLDLVHSA True True AVLDLVHSA 65.882163 462.761279284954 31731140.0 12276.0 ENST00000598755.1_1_19:52104581-52104959:+|nuORF;;ENSG00000142544|ENST00000421832|CTU1 6.057842413584392 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12281 65.883 18.0 2864700.0 25 0 203880.0 + 24766 MPHLSMQQV 9 87 535.760819024161 1069.507085115122 2 535.7609130740166 MULTI CID FTMS 0 0 0 12276 1852737.375 0.3188635789825863 -3 0.2685470581054687 5 Unmodified _MPHLSMQQV_ ENSG00000142207|ENST00000382751|URB1 50.855029805455786 0.0384952370514206 4 [AG]V[HN]SMQ{[QV]|[N{I|L}]|[RA]|[KV]} 10 4 + 37.754 0.0 0.0 3.53 3.53 71.576 0.0 0.0 0.0 9.32135599809144 14.86618034270369 9.32135599809144 5.255762612236907 0 0.2396518287104437 2.0 1.079689690656103 0.0 [AG]V[HN]SMQ{[QV]|[N{I|L}]|[RA]|[KV]};[AG]V[HN]SQM{[QV]|[N{I|L}]|[RA]|[KV]};[AG]V[HN]SM[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}[EP]PMQ{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}[WH]MQ{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}[HN]SMQ{[QV]|[N{I|L}]|[RA]|[KV]};[AG]V[HN]S[AG]M{[QV]|[N{I|L}]|[RA]|[KV]};[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}SMQ{[QV]|[N{I|L}]|[RA]|[KV]};[AG]V[HN]AACT{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}[EP]PQM{[QV]|[N{I|L}]|[RA]|[KV]} 3.53;3.0386;2.6731;2.3135;2.2708;2.2229;2.1817;1.9415;1.8549;1.8221 -;-;-;-;-;-;-;-;-;- 442 1 1.236 44601.1 1.0 7523 4756 12276 HBL1_DMSO_200M_050219_2,12281 HBL1_DMSO_200M_050219_2,12281,MPHLSMQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12282 65.885 39.0 1761900.0 25 0 160920.0 + 30150 QVPDDLPNV 9 84 498.753739201996 995.492925470792 2 498.7536193728447 MULTI CID FTMS 0 0 0 12276 1262880.25 0.94729123932239 1 -0.0502548217773437 6 Unmodified _QVPDDLPNV_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 58.6788170122104 0.0268135626297836 4 [DP]D{I|L}N{I|L} 6 4 43.237 0.0 0.0 4.3433 0.0 0.0 0.0 325.1514617769273 325.1514617769273 16.313506577119625 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.805462187404089 0.3054621874040891 [DP]D{I|L}N{I|L} 4.3433 - 417 1 1.236 56669.8 1.0 7524 4756 12276 HBL1_DMSO_200M_050219_2,12282 HBL1_DMSO_200M_050219_2,12282,QVPDDLPNV True True QVPDDLPNV 65.884519 498.753619372845 35157636.0 12276.0 ENSG00000080345|ENST00000444746|RIF1;;nc|ENSG00000080345|Q5UIP0-2|RIF1 6.579347133636475 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12283 65.886 50.0 1004500.0 25 0 208350.0 8860 FAALALTT 8 77 404.23364968539136 806.4527464375827 2 404.2329589724541 MULTI CID FTMS 0 0 0 12276 1150070.0 0.4985458519391603 2 -0.150543212890625 7 Unmodified _FAALALTT_ ENSG00000104059|ENST00000261275|ENTREP2 0.6903765706972694 0.8201419426409876 4 P 1 8 0.9691 0.0 0.0 0.12017 0.0 0.0 588.3371591346515 118.03536401920157 706.3725231538531 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.12017 - 2 + 1 1.236 45484.8 1.0 7525 4756 12276 HBL1_DMSO_200M_050219_2,12283 HBL1_DMSO_200M_050219_2,12283,FAALALTT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12284 65.887 40.0 1029200.0 25 0 74930.0 + -1 MPLLFGCEH 9 87 552.2563770564974 1102.4982011797947 2 552.2563964724541 MULTI CID FTMS 0 0 0 12276 823974.4375 1.0 0 0.0 8 Carbamidomethyl (C) _MPLLFGC(Carbamidomethyl (C))EH_ REV__ENSG00000159398|ENST00000290567|CES5A;REV__nc|ENSG00000159398|Q6NT32-2|CES5A;REV__nc|ENSG00000159398|Q6NT32-3|CES5A;REV__nc|ENSG00000159398|Q6NT32-4|CES5A 16.942295170755138 0.3780752226737986 4 MP{I|L}G[{I|L}T]H 7 -1 51.247 0.0 0.0 4.6482 0.0 0.0 0.0 350.0855806940063 350.0855806940063 33.05925402426212 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.3807196863200844 0.0 MP{I|L}G[{I|L}T]H 4.6482 - 109 + 1 1.236 39803.3 1.0 7526 4756 12276 HBL1_DMSO_200M_050219_2,12284 HBL1_DMSO_200M_050219_2,12284,MPLLFGCEH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12285 65.888 57.0 821900.0 25 0 81690.0 + 3672 DAENAMRYI 9 69 541.7504174655621 1081.4862819979242 2 541.7510253787041 MULTI CID FTMS 0 0 0 12276 608063.5 0.0411549123004601 -3 0.2685470581054687 9 Unmodified _DAENAMRYI_ ENSG00000114503|ENST00000321256|NCBP2;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;ENST00000479647.1_1_3:196664263-196668636:-|nuORF;nc|ENSG00000114503|P52298-2|NCBP2 65.23502041540118 0.0231836506122253 4 {[DA]|[EG]}ENAMRY{I|L} 9 0 + 83.694 0.0 0.0 7.7388 7.7388 91.342 0.0 0.0 0.0 68.74561638267224 9.041068762088996 9.041068762088996 9.208187539523747 0 1.0994850021680094 2.0 0.3807196863200844 0.75 + + {[DA]|[EG]}ENAMRY{I|L};{[DA]|[EG]}EGGAMRY{I|L};WENAM[VG]Y{I|L};{[DA]|[EG]}ENE[KT]Y{I|L};{[DA]|[EG]}E[C(Carbamidomethyl (C))R][VG]Y{I|L};{[DA]|[EG]}EGGE[KT]Y{I|L};WEGGAM[VG]Y{I|L};[H{I|L}]{[TV]|[{I|L}S]}MAN[C(Carbamidomethyl (C))H];{[DA]|[EG]}[WQ]M[VG]Y{I|L};{[DA]|[EG]}Q[HA]{[QV]|[N{I|L}]|[RA]|[KV]}QW 7.7388;6.8874;5.8895;5.6371;4.8279;4.7856;4.3446;4.0332;3.8744;3.2639 +;-;-;-;-;-;-;-;-;- + 382 + 1 1.236 43147.4 1.0 7527 4756 12276 HBL1_DMSO_200M_050219_2,12285 HBL1_DMSO_200M_050219_2,12285,DAENAMRYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12286 65.89 70.0 1522600.0 25 0 108700.0 -1 0 100 910.4224407745764 1818.8303286159528 2 910.9237548708916 MULTI CID FTMS 0 0 0 12276 595024.0625 0.1385267663049013 4 -0.3418655395507812 10 4 [TP]VPTV 6 -1 26.282 0.0 0.0 1.445 0.0 0.0 0.0 1221.4694407640184 1221.4694407640184 9.24717681419827 0.0 0.0 0.0 0 0.0 0.0 1.5189301784845295 0.0 [TP]VPTV 1.445 - 1094 1 1.236 73657.1 1.0 7528 4756 12276 HBL1_DMSO_200M_050219_2,12286 HBL1_DMSO_200M_050219_2,12286, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12287 65.893 147.0 761600.0 25 0 85655.0 + 24033 DARVAITI 8 109 429.7560807971466 857.4976086610933 2 429.7560607790947 MULTI CID FTMS 0 0 0 12276 481273.9375 0.8019620013893041 -1 0.0615921020507812 11 Unmodified _LWAAALTL_ nc|ENSG00000102858|O60291-4|MGRN1;nc|ENSG00000102858|O60291-3|MGRN1;nc|ENSG00000141576|Q96PX1-2|RNF157;nc|ENSG00000102858|O60291|MGRN1;ENSG00000141576|ENST00000269391|RNF157;ENSG00000102858|ENST00000262370|MGRN1 36.46614268402704 0.2934124525509074 4 {[DA]|[EG]}RVA{I|L}T{I|L} 8 4 + 49.479 0.0 0.0 5.7701 5.7701 87.685 0.0 0.0 0.0 8.733354070789474 33.95950761317607 8.733354070789474 15.260847058321689 0 0.805462187404089 0.9208187539523752 0.4247425010840047 0.3054621874040891 {[DA]|[EG]}RVA{I|L}T{I|L};[{I|L}T][RN]{I|L}E{I|L} 5.7701;3.9904 -;- 86 1 1.236 88549.3 1.0 7529 4756 12276 HBL1_DMSO_200M_050219_2,12287 HBL1_DMSO_200M_050219_2,12287,LWAAALTL False False DARVAITI 65.893059 429.756060779095 4394048.0 12276.0 nc|ENSG00000102858|O60291-4|MGRN1;;nc|ENSG00000102858|O60291-3|MGRN1;;nc|ENSG00000141576|Q96PX1-2|RNF157;;nc|ENSG00000102858|O60291|MGRN1;;ENSG00000141576|ENST00000269391|RNF157;;ENSG00000102858|ENST00000262370|MGRN1 3.452957312266032 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12288 65.896 142.0 841690.0 25 0 70268.0 + 4416 DAVRVLREI 9 125 357.54894947841865 1069.625019035456 3 357.5486022830009 MULTI CID FTMS 0 0 0 12276 421367.78125 0.3718107937055578 -2 0.1465301513671875 12 Unmodified _DAVRVLREI_ ENSG00000107404|ENST00000378888|DVL1;ENSG00000161202|ENST00000313143|DVL3;ENST00000478247.1_1_3:183882805-183888540:+|nuORF;ENST00000478639.1_1_3:183883993-183884404:+|nuORF;nc|ENSG00000107404|O14640-2|DVL1;nc|ENSG00000161202|Q92997-2|DVL3 28.49450938151212 0.1686335738423394 4 DAVRV{I|L}{[RE]|[WV]}{I|L} 9 0 + 71.138 0.0 0.0 6.6507 6.6507 80.122 0.0 0.0 0.0 46.07586369482071 2.0065945054641787 2.0065945054641787 3.0102999566398125 0 0.4247425010840047 2.0 0.0 0.6747425010840047 + + DAVRV{I|L}{[RE]|[WV]}{I|L};DAV{I|L}RV{[RE]|[WV]}{I|L};DA{I|L}VRV{[RE]|[WV]}{I|L};DAVR{I|L}V{[RE]|[WV]}{I|L};D{I|L}GRV{I|L}{[RE]|[WV]}{I|L};DAV{I|L}R{[QN]|[E{I|L}]|[KN]}[RV];DA{I|L}VR{[QN]|[E{I|L}]|[KN]}[RV];D{I|L}G{I|L}RV{[RE]|[WV]}{I|L};D{I|L}AVRV{[RE]|[WV]}{I|L};DAVR{I|L}{[QN]|[E{I|L}]|[KN]}[RV] 6.6507;6.3693;6.3466;6.0878;5.1994;4.9956;4.973;4.9179;4.8953;4.7142 +;-;-;-;-;-;-;-;-;- + 628 + 1 1.236 99901.2 1.0 7530 4756 12276 HBL1_DMSO_200M_050219_2,12288 HBL1_DMSO_200M_050219_2,12288,DAVRVLREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12289 65.9 213.0 502830.0 25 0 46686.0 + 5597 DNLSLDNL 8 111 903.4385624362488 902.4312859696488 1 903.4401122927666 MULTI CID FTMS 0 0 0 12276 423412.15625 0.5060247060903551 -2 0.1465301513671875 13 Unmodified _DNLSLDNL_ ENSG00000070882|ENST00000313367|OSBPL3;nc|ENSG00000070882|Q9H4L5-2|OSBPL3;nc|ENSG00000070882|Q9H4L5-3|OSBPL3;nc|ENSG00000070882|Q9H4L5-4|OSBPL3;nc|ENSG00000070882|Q9H4L5-5|OSBPL3;nc|ENSG00000070882|Q9H4L5-6|OSBPL3;nc|ENSG00000070882|Q9H4L5-7|OSBPL3;nc|ENSG00000070882|Q9H4L5-8|OSBPL3;OSBPL3|p.R837Kfs*6|1|0.48|ENSG00000070882|chr7:24804369-24804372|TCTC/-|frameshift_variant 114.20165948288296 0.0276619793778279 4 {NN|[MP]|[D{I|L}]|[EV]}NS{I|L}DN{I|L} 8 2 + 101.01 0.0 0.0 11.193 11.193 94.96 0.0 0.0 0.0 17.034021960761265 7.136605671143741 7.136605671143741 9.262137858390815 0 1.510574239612792 1.5228787452803376 1.66944517631652 1.4876954943324543 {NN|[MP]|[D{I|L}]|[EV]}NS{I|L}DN{I|L};{NN|[MP]|[D{I|L}]|[EV]}NS{I|L}DGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGS{I|L}DN{I|L};{NN|[MP]|[D{I|L}]|[EV]}SN{I|L}DN{I|L};{NN|[MP]|[D{I|L}]|[EV]}NSD{I|L}N{I|L};[DN]{I|L}S{I|L}DN{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGS{I|L}DGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}SGG{I|L}DN{I|L};{NN|[MP]|[D{I|L}]|[EV]}SN{I|L}DGG{I|L};[NS]{I|L}D{I|L}DN{I|L} 11.193;10.167;10.167;9.7305;9.452;9.3057;9.1465;8.7042;8.7042;8.4464 -;-;-;-;-;+;-;-;-;- + 1893 1 1.236 73556.1 1.0 7531 4756 12276 HBL1_DMSO_200M_050219_2,12289 HBL1_DMSO_200M_050219_2,12289,DNLSLDNL True True DINSIDNL 65.899973 903.440112292767 3334691.0 12276.0 ENSG00000137959|ENST00000370751|IFI44L;;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 3.972271045049032 1.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12290 65.902 95.0 1185200.0 25 0 112890.0 + 42890 VVPAALKVV 9 99 448.3025672080103 894.5905814828205 2 448.3027221560478 MULTI CID FTMS 0 0 0 12276 338332.34375 0.0533452654296047 -3 0.2685470581054687 14 Unmodified _VVPAALKVV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 34.10243960390752 0.1078313939113124 4 VVPGKVG{I|L} 8 5 48.078 0.0 0.0 5.3743 0.0 0.0 0.0 142.07521945563568 142.07521945563568 29.661903266879715 0.0 0.0 0.0 0 0.718765315847925 2.0 0.0 0.0 VVPGKVG{I|L} 5.3743 - 508 1 1.236 92373.8 1.0 7532 4756 12276 HBL1_DMSO_200M_050219_2,12290 HBL1_DMSO_200M_050219_2,12290,VVPAALKVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12291 65.904 70.0 604490.0 25 0 35567.0 + 21746 LPMDYVQRV 9 77 560.7944633592394 1119.5743737852788 2 560.7944824099541 MULTI CID FTMS 0 0 0 12276 417336.21875 0.0812130931368924 4 -0.3418655395507812 15 Unmodified _LPMDYVQRV_ ENSG00000179115|ENST00000314606|FARSA;nc|ENSG00000179115|Q9Y285-2|FARSA 19.62595529434964 0.305431704817896 4 {I|L}PMDYV[RN]{I|L} 9 2 + 64.659 0.0 0.0 5.7753 5.7753 55.812 0.0 0.0 0.0 33.46787486224656 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {I|L}PMDYV[RN]{I|L};{I|L}PMDYVQ[RV];{I|L}PMDYV[AG][RV] 5.7753;5.7753;4.9528 -;+;- + 99 + 1 1.236 39386.0 1.0 7533 4756 12276 HBL1_DMSO_200M_050219_2,12291 HBL1_DMSO_200M_050219_2,12291,LPMDYVQRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12292 65.906 91.0 910320.0 25 0 132740.0 + 22441 TPMTVPRI 8 110 457.2681623202385 912.5217717072768 2 457.2681457400322 MULTI CID FTMS 0 0 0 12276 386843.1875 0.4163237206661861 3 -0.2701568603515625 16 Unmodified _LPTPHHVL_ nc|ENSG00000163376|Q8NFY9-2|KBTBD8;ENSG00000163376|ENST00000417314|KBTBD8 20.871210003555333 0.6025813472596342 4 {I|L}P{I|L}G 4 6 53.8 0.0 0.0 5.8958 0.0 0.0 0.0 529.2537325494749 529.2537325494749 28.36356183317441 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P{I|L}G 5.8958 - 161 + 1 1.236 68253.7 1.0 7534 4756 12276 HBL1_DMSO_200M_050219_2,12292 HBL1_DMSO_200M_050219_2,12292,LPTPHHVL False False TPMTVPRI 65.905703 457.268145740032 6752062.0 12276.0 nc|ENSG00000163376|Q8NFY9-2|KBTBD8;;ENSG00000163376|ENST00000417314|KBTBD8 4.546336650848389 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12293 65.907 51.0 816670.0 25 0 57332.0 + 19181 LEEQFHKL 8 89 522.280974608767 1042.547396284334 2 522.2875244021416 MULTI CID FTMS 0 0 0 12276 368330.125 0.2358132298136248 -4 0.3509597778320312 17 Unmodified _LEEQFHKL_ REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D 9.347437153973935 0.7675937258251505 4 [TA]H 3 -1 21.427 0.0 0.0 2.0552 0.0 0.0 0.0 730.3883706341331 730.3883706341331 -1.8842499412940616 0.0 -1.8842499412940616 0.0 0 0.0 1.0969100130080565 0.0 0.0 [TA]H 2.0552 - 55 + 1 1.236 41154.4 1.0 7535 4756 12276 HBL1_DMSO_200M_050219_2,12293 HBL1_DMSO_200M_050219_2,12293,LEEQFHKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12294 65.91 177.0 813830.0 25 0 62800.0 + 24200 MAFLPHHI 8 129 322.50595148265893 964.4960250481768 3 322.5055114626884 MULTI CID FTMS 0 0 0 12276 296262.8125 0.5150134598487773 -2 0.1465301513671875 18 Unmodified _MAFLPHHI_ ENSG00000178974|ENST00000313833|FBXO34 32.45364647766026 0.3613649037604678 4 [WY]{I|L}PHH{I|L} 7 3 + 31.726 0.0 0.0 3.2894 3.2894 69.862 0.0 0.0 0.0 6.777807052660805 4.313637641589878 4.313637641589878 4.313637641589878 0 0.0 0.0 0.0 0.0 [WY]{I|L}PHH{I|L};[WY]{I|L}PH{I|L}H;[WY]{I|L}{I|L}EE{I|L};[WY]{I|L}P{[MG]|[TS]}[KA];[WY]{I|L}VV[QA]S 3.2894;2.8422;2.1229;1.2498;1.1273 -;-;-;-;- 190 + 1 1.236 117830.5 1.0 7536 4756 12276 HBL1_DMSO_200M_050219_2,12294 HBL1_DMSO_200M_050219_2,12294,MAFLPHHI False True MAFLPHHI 65.910482 322.505511462688 6617025.75 12276.0 ENSG00000178974|ENST00000313833|FBXO34 6.2103705406188965 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12295 65.912 78.0 480860.0 25 0 51252.0 + 11876 GLTVPGAEAK 10 80 471.7682185102676 941.5218840873353 2 472.2696716189384 MULTI CID FTMS 0 0 0 12276 281554.78125 0.19024860282748 8 -0.7650070190429688 19 Unmodified _GLTVPGAEAK_ REV__ENSG00000169129|ENST00000304129|AFAP1L2;REV__ENST00000491814.1_1_10:116056685-116061337:-|nuORF;REV__nc|ENSG00000169129|Q8N4X5-2|AFAP1L2;REV__nc|ENSG00000169129|Q8N4X5-3|AFAP1L2;REV__nc|ENSG00000169129|Q8N4X5-4|AFAP1L2 10.073929032068715 0.6785112666868882 4 [KS]M[HQ]{I|L}[KA] 8 -1 + 22.28 0.0 0.0 2.3664 2.3664 75.932 0.0 0.0 0.0 6.861818737241732 1.822581265925436 1.822581265925436 12.156818820794935 0 0.0 0.0 0.0 0.2614393726401688 [KS]M[HQ]{I|L}[KA];[KS]M[HQ][KA]{I|L} 2.3664;1.0752 -;- 151 + 1 1.236 34906.9 1.0 7537 4756 12276 HBL1_DMSO_200M_050219_2,12295 HBL1_DMSO_200M_050219_2,12295,GLTVPGAEAK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12296 65.924 698.0 418190.0 25 0 51930.0 -1 0 163 641.9501534972254 1922.828631091876 3 642.2845947146416 MULTI CID FTMS 0 0 0 12276 239298.5 0.4749366631372015 -2 0.1465301513671875 20 4 {[QN]|[E{I|L}]|[KN]}N[HA]C{[RE]|[WV]}C(Carbamidomethyl (C))YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 15 -1 + 71.933 0.0 0.0 3.741 3.741 65.47 0.0 0.0 0.0 5.945222090681199 7.61760834195475 5.945222090681199 1.249387366082999 0 1.0994850021680094 1.3010299956639813 0.566901560044258 1.9361818737241727 {[QN]|[E{I|L}]|[KN]}N[HA]C{[RE]|[WV]}C(Carbamidomethyl (C))YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}[HQ]GC{[RE]|[WV]}C(Carbamidomethyl (C))YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}NYN[YR]C(Carbamidomethyl (C))YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}DN[YR]C(Carbamidomethyl (C))YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}[HQ]C(Carbamidomethyl (C)){[RE]|[WV]}C(Carbamidomethyl (C))YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}NYN[YR][CG]YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}GGYN[YR]C(Carbamidomethyl (C))YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}NYGG[YR]C(Carbamidomethyl (C))YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}NYN[YR]C(Carbamidomethyl (C))YGGE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[Q{I|L}]HEGC{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NS]YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.741;3.676;3.672;3.4318;3.3281;3.2013;3.2013;3.2013;3.2013;3.0968 -;-;-;-;-;-;-;-;-;- 5788 1 1.236 211027.1 1.0 7538 4756 12276 HBL1_DMSO_200M_050219_2,12296 HBL1_DMSO_200M_050219_2,12296, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12298 65.93 90.0 584010.0 25 0 73717.0 + 42050 VQVDPGQVGL 10 82 506.27740463797886 0 506.2774841189384 PEAK CID FTMS 0 0 0 12297 528362.4375 0.94544018366177 1 -0.1002883911132812 1 Unmodified _VQVDPGQVGL_ ENSG00000198690|ENST00000362065|FAN1;nc|ENSG00000198690|Q9Y2M0-2|FAN1 38.17557092003332 0.1299896074792053 4 QVDV{M(Oxidation (M))|F} 5 6 26.37 0.0 0.0 2.6095 0.0 0.0 287.183589304367 132.04572473697502 419.2293140413421 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 QVDV{M(Oxidation (M))|F} 2.6095 - 265 + 1 1.245 48902.4 1.0 7539 4757 12297 HBL1_DMSO_200M_050219_2,12298 HBL1_DMSO_200M_050219_2,12298,VQVDPGQVGL False True VQVDPGQVGL 65.930021 506.277484118938 3659313.0 12297.0 nc|ENSG00000198690|Q9Y2M0-2|FAN1;;ENSG00000198690|ENST00000362065|FAN1 6.253372987111409 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12299 65.931 41.0 1231200.0 25 0 124100.0 + 32365 RYPTSIASL 9 89 504.27999202486376 1006.5454311165277 2 504.2817565798759 MULTI CID FTMS 0 0 0 12297 773395.4375 0.0397202330174972 -12 1.1058807373046875 2 Unmodified _RYPTSIASL_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 27.628801355627647 0.1796483985696185 4 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 5 + 58.763 0.0 0.0 5.8381 5.8381 81.364 0.0 0.0 0.0 6.126342309407548 10.0 6.126342309407548 6.126342309407548 0 0.9247425010840048 1.3010299956639813 0.6382104921644451 0.0 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}N[KS]{I|L}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}GN[KS]{I|L}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}VWT{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}[KC][KS]{I|L}AS{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GG[KS]{I|L}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}GGG[KS]{I|L}AS{I|L};{[TV]|[{I|L}S]}A{[TV]|[{I|L}S]}R{M(Oxidation (M))|F}T{I|L};{[TV]|[{I|L}S]}A[HA][{I|L}P]AD{I|L} 5.8381;5.2295;4.5858;4.5255;4.4297;4.4109;4.3146;3.6754;3.1002;2.4584 -;-;-;-;-;-;-;-;-;- 409 1 1.245 45076.6 1.0 7540 4757 12297 HBL1_DMSO_200M_050219_2,12299 HBL1_DMSO_200M_050219_2,12299,RYPTSIASL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12300 65.935 175.0 658170.0 25 0 112220.0 + 42977 VVTPLPAA 8 100 384.23574894491776 766.4569449566355 2 384.2355224490166 MULTI CID FTMS 0 0 0 12297 519913.1875 0.0633834321812649 -3 0.1967849731445312 3 Unmodified _VVTPLPAA_ REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF 0.0 0.8243325171867699 4 C(Carbamidomethyl (C)) 1 -1 5.4846 0.0 0.0 0.71557 0.0 0.0 518.372043078509 85.0301760309203 603.4022191094293 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.71557 - 6 + 1 1.245 94140.7 1.0 7541 4757 12297 HBL1_DMSO_200M_050219_2,12300 HBL1_DMSO_200M_050219_2,12300,VVTPLPAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12301 65.939 250.0 271420.0 25 0 47597.0 + 43996 YIDKDLEYV 9 114 579.2898601884094 1156.5651674436187 2 579.2908203005791 MULTI CID FTMS 0 0 0 12297 280220.25 0.849020658445277 -1 0.0502548217773437 4 Unmodified _YIDKDLEYV_ ENSG00000113360|ENST00000344624|DROSHA;ENST00000509067.1_1_5:31409161-31409425:-|nuORF;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA 41.8396318013385 0.0653578398400075 4 {NN|[MP]|[D{I|L}]|[EV]}EKDY{I|L}VY 9 5 + 62.857 0.0 0.0 5.4348 5.4348 72.205 0.0 0.0 0.0 9.462724883926654 16.478174818886373 9.462724883926654 1.3760434043674508 0 0.4247425010840047 1.3010299956639813 0.7059771852360797 0.0 {NN|[MP]|[D{I|L}]|[EV]}EKDY{I|L}VY;{NN|[MP]|[D{I|L}]|[EV]}KDY{I|L}EVY;{NN|[MP]|[D{I|L}]|[EV]}KDEY{I|L}VY;{NN|[MP]|[D{I|L}]|[EV]}EKYVEVY;{NN|[MP]|[D{I|L}]|[EV]}KEDY{I|L}VY;{NN|[MP]|[D{I|L}]|[EV]}KDYE{I|L}VY;{NN|[MP]|[D{I|L}]|[EV]}EKYD{I|L}VY;{NN|[MP]|[D{I|L}]|[EV]}KEYVEVY;[Y{I|L}]WWVEVY;{NN|[MP]|[D{I|L}]|[EV]}WWY{I|L}VY 5.4348;5.3158;5.2188;5.1536;4.9143;4.9033;4.7411;4.633;4.6166;4.3388 -;-;-;-;-;-;-;-;-;- 786 1 1.245 59338.7 1.0 7542 4757 12297 HBL1_DMSO_200M_050219_2,12301 HBL1_DMSO_200M_050219_2,12301,YIDKDLEYV True True YIDKDLEYV 65.93925 579.290820300579 2420820.5 12297.0 ENST00000509067.1_1_5:31409161-31409425:-|nuORF;;nc|ENSG00000113360|Q9NRR4-2|DROSHA;;ENSG00000113360|ENST00000344624|DROSHA;;nc|ENSG00000113360|Q9NRR4-4|DROSHA 5.270828406016032 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12302 65.942 112.0 605970.0 25 0 82604.0 + 16740 KFIDKQLEL 9 94 378.5573294659363 1132.650158998009 3 378.5573608279228 MULTI CID FTMS 0 0 0 12297 266012.75 0.5435451582836571 -1 0.0502548217773437 5 Unmodified _KFIDKQLEL_ ENSG00000116688|ENST00000235329|MFN2;nc|ENSG00000116688|O95140-2|MFN2 12.240655878213236 0.5053430591993562 4 [{I|L}V][YQ]KQ 6 7 25.15 0.0 0.0 2.2205 0.0 0.0 0.0 370.1981075666215 370.1981075666215 9.665762445130497 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V][YQ]KQ 2.2205 - 145 1 1.245 60256.9 1.0 7543 4757 12297 HBL1_DMSO_200M_050219_2,12302 HBL1_DMSO_200M_050219_2,12302,KFIDKQLEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12303 65.945 147.0 543760.0 25 0 68740.0 + 30008 QTISALIKA 9 110 472.79099834728805 943.567443761376 2 472.7927123904228 MULTI CID FTMS 0 0 0 12297 249326.578125 0.3945839560282822 -1 0.0502548217773437 6 Unmodified _QTISALIKA_ ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF 26.268140514670165 0.1969607489560049 4 {[TV]|[{I|L}S]}PNA{I|L}{I|L} 7 5 46.722 0.0 0.0 4.9517 0.0 0.0 0.0 232.12662279873865 232.12662279873865 0.0302622544517063 0.0 0.0 0.0 0 0.0 1.154901959985743 1.113982988912431 0.7614393726401688 {[TV]|[{I|L}S]}PNA{I|L}{I|L} 4.9517 - 562 1 1.245 66006.7 1.0 7544 4757 12297 HBL1_DMSO_200M_050219_2,12303 HBL1_DMSO_200M_050219_2,12303,QTISALIKA False True QTISALIKA 65.94454 472.792712390423 10120390.0 12297.0 ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 5.482484817504883 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12304 65.946 62.0 779540.0 25 0 36599.0 + + -1 RWMDEAQAL 9 87 560.2635218734174 1118.5124908136347 2 560.2648803591728 MULTI CID FTMS 0 0 0 12297 272283.25 1.0 0 0.0 7 Oxidation (M) _FFYM(Oxidation (M))PSQLA_ ENSG00000164134|ENST00000296543|NAA15;nc|ENSG00000164134|Q9BXJ9-4|NAA15 10.073929032068715 0.563993802247229 4 PMDYV[RN]{I|L} 8 -1 21.948 0.0 0.0 1.9623 0.0 0.0 112.02593183101597 0.0 112.02593183101597 0.0 -1.5072433980331112 -1.5072433980331112 0.0 0 0.0 0.0 0.0 0.0 PMDYV[RN]{I|L} 1.9623 - 158 + 1 1.245 44556.6 1.0 7545 4757 12297 HBL1_DMSO_200M_050219_2,12304 HBL1_DMSO_200M_050219_2,12304,FFYMPSQLA False False RWMDEAQAL 65.946063 560.264880359173 2027377.0 12297.0 ENSG00000164134|ENST00000296543|NAA15;;nc|ENSG00000164134|Q9BXJ9-4|NAA15 1.6940044164657593 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12305 65.96 800.0 307220.0 25 0 21422.0 + 9979 FPHHLQEYI 9 199 592.2987709769544 1182.5829890207087 2 592.3004638552666 MULTI CID FTMS 0 0 0 12297 152927.21875 0.3014234933093837 -2 0.111846923828125 8 Unmodified _FPHHLQEYI_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 46.020951573049366 0.0490941689151868 4 {[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}{I|L}QEY{I|L} 9 4 + 56.077 0.0 0.0 4.7419 4.7419 67.193 0.0 0.0 0.0 3.6675055410631714 14.089249857740851 3.6675055410631714 0.3246091534035145 0 0.8252574989159953 1.0969100130080565 0.7302046884880937 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}{I|L}QEY{I|L};{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}{I|L}VSAY{I|L};{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}{I|L}AGEY{I|L};[H{I|L}]HM{I|L}QEY{I|L};{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}{I|L}ADAY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH{I|L}QEY{I|L};[H{I|L}]HQEP{M(Oxidation (M))|F}Y{I|L};[H{I|L}]HM{I|L}ADAY{I|L};HHP{M(Oxidation (M))|F}{I|L}QEY{I|L};[H{I|L}]HM{I|L}AGEY{I|L} 4.7419;4.7144;4.7032;4.4318;4.4114;4.3908;4.2829;4.2022;4.1398;4.1348 -;-;-;-;-;+;-;-;-;- + 15392 1 1.245 179382.4 0.9399999976158142 7546 4757 12297 HBL1_DMSO_200M_050219_2,12305 HBL1_DMSO_200M_050219_2,12305,FPHHLQEYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12306 65.974 800.0 324080.0 25 0 18689.0 + 34939 SQITNSRNMN 10 206 582.7726633746413 1163.5307738160825 2 582.7734252810478 MULTI CID FTMS 0 0 0 12297 147469.3125 1.0 0 0.0 9 Unmodified _SQITNSRNMN_ REV__ENSG00000171488|ENST00000370454|LRRC8C 18.373094154950223 0.5392593366289069 4 [AG]S{I|L}SQ 6 -1 39.815 0.0 0.0 3.4219 0.0 0.0 0.0 617.2419303925075 617.2419303925075 21.142586965640227 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 1.0183115237025655 0.0 [AG]S{I|L}SQ 3.4219 - 2321 1 1.245 190949.5 0.9300000071525574 7547 4757 12297 HBL1_DMSO_200M_050219_2,12306 HBL1_DMSO_200M_050219_2,12306,SQITNSRNMN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12307 65.988 800.0 242760.0 25 0 18090.0 -1 0 142 653.0158709472697 1956.025783442009 3 653.3511230349541 MULTI CID FTMS 0 0 0 12297 126897.28125 1.0 0 0.0 10 4 {[QV]|[N{I|L}]|[RA]|[KV]}TQPTVGGV{I|L}D[WH]QQ 16 -1 74.318 0.0 0.0 3.7994 0.0 0.0 0.0 179.0830477350219 179.0830477350219 32.13007761121707 0.0 0.0 0.0 0 0.218765315847925 1.6989700043360187 0.0 1.0629529932484498 {[QV]|[N{I|L}]|[RA]|[KV]}TQPTVGGV{I|L}D[WH]QQ 3.7994 - 28458 + 1 1.245 146340.2 0.8899999856948853 7548 4757 12297 HBL1_DMSO_200M_050219_2,12307 HBL1_DMSO_200M_050219_2,12307, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12308 66.001 800.0 214310.0 25 0 25913.0 + 16334 IYHTINTSPF 10 163 596.8035075487574 1191.5924621643146 2 596.8032714724541 MULTI CID FTMS 0 0 0 12297 118294.3671875 0.5996466120713457 -2 0.111846923828125 11 Unmodified _IYHTINTSPF_ ENST00000370331.5_1_1:93201975-93202140:-|nuORF 71.92227651296345 0.0188747003512554 4 [H{I|L}]YT{I|L}NTSP{M(Oxidation (M))|F} 10 2 + 56.02 0.0 0.0 4.7012 4.7012 77.544 0.0 0.0 0.0 11.83364761065306 6.7067140750479695 6.7067140750479695 6.989700043360188 0 1.0317183090963749 1.0969100130080565 1.9361818737241727 0.0 [H{I|L}]YT{I|L}NTSP{M(Oxidation (M))|F};[H{I|L}]TY{I|L}NTSP{M(Oxidation (M))|F};[H{I|L}]YT{I|L}GGTSP{M(Oxidation (M))|F};[VG]AWT{I|L}NTSP{M(Oxidation (M))|F};{[WN]|[YH]}{I|L}T{I|L}NTSP{M(Oxidation (M))|F};[H{I|L}]TY{I|L}GGTSP{M(Oxidation (M))|F};[HT]{I|L}Y{I|L}NTSP{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[WQ]{I|L}NTSP{M(Oxidation (M))|F};[{I|L}T]HY{I|L}NTSP{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}WT{I|L}NTSP{M(Oxidation (M))|F} 4.7012;4.1147;3.9321;3.7081;3.3803;3.3456;3.1876;3.1843;3.0174;2.9936 -;-;-;-;-;-;-;-;-;- 3963 1 1.245 130642.9 0.8700000047683716 7549 4757 12297 HBL1_DMSO_200M_050219_2,12308 HBL1_DMSO_200M_050219_2,12308,IYHTINTSPF True True IYHTINTSPF 66.001406 596.803271472454 2453316.5 12297.0 ENST00000370331.5_1_1:93201975-93202140:-|nuORF 3.692556699117025 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12309 66.017 800.0 221930.0 25 0 14080.0 -1 0 132 1138.485527188712 2274.956501444224 2 1138.485644519329 MULTI CID FTMS 0 0 0 12297 117784.96875 0.5926992731132249 -2 0.111846923828125 12 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NQCS[H{I|L}]AG[DG]AA 14 -1 49.393 0.0 0.0 2.1712 0.0 0.0 0.0 913.3577214972116 913.3577214972116 3.76008289802472 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.960409376976188 0.555462187404089 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NQCS[H{I|L}]AG[DG]AA 2.1712 - 100735 1 1.245 116132.1 0.7300000190734863 7550 4757 12297 HBL1_DMSO_200M_050219_2,12309 HBL1_DMSO_200M_050219_2,12309, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12310 66.022 256.0 401790.0 25 0 105330.0 -1 0 111 604.2971499096432 1809.8696203291288 3 604.2985717654228 MULTI CID FTMS 0 0 0 12297 102617.40625 0.805783915041417 -1 0.0502548217773437 13 4 [VP]Y 3 -1 15.15 0.0 0.0 0.83709 0.0 0.0 0.0 1447.6588713879764 1447.6588713879764 0.7640941797061576 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [VP]Y 0.83709 - 220 1 1.245 75411.0 1.0 7551 4757 12297 HBL1_DMSO_200M_050219_2,12310 HBL1_DMSO_200M_050219_2,12310, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12311 66.025 164.0 397320.0 25 0 48194.0 -1 0 101 395.2055592055013 394.19828273890136 1 395.2018920779228 MULTI CID FTMS 0 0 0 12297 107404.03125 0.4885139984111951 -3 0.1967849731445312 14 4 {I|L} 1 -1 13.979 0.0 0.0 3.5463 0.0 0.0 263.1034016127279 0.0 263.1034016127279 0.0 12.385606273598311 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.5463 - 8 + 1 1.245 57471.1 1.0 7552 4757 12297 HBL1_DMSO_200M_050219_2,12311 HBL1_DMSO_200M_050219_2,12311, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12313 66.029 8.8 3569200.0 25 0 308850.0 + + 6446 QPFEDTPVV 9 54 516.2557444846881 1030.496936036176 2 516.2563354372978 MULTI CID FTMS 0 0 0 12312 5622284.5 1.0 0 0.0 1 Unmodified _EAEWTTPVV_ nc|ENSG00000123485|Q8NCD3-2|HJURP;nc|ENSG00000123485|Q8NCD3-3|HJURP;ENST00000454020.1_3_2:234756047-234763110:-|nuORF;ENSG00000123485|ENST00000411486|HJURP 24.67388899826682 0.2172451872415813 4 [VP]M{[C(Carbamidomethyl (C))E]|[WC]}T 6 -1 26.387 0.0 0.0 2.5607 0.0 0.0 0.0 310.17565477622026 310.17565477622026 7.715299873086604 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 1.0 0.0 [VP]M{[C(Carbamidomethyl (C))E]|[WC]}T 2.5607 - 64 1 1.261 36204.5 1.0 7553 4758 12312 HBL1_DMSO_200M_050219_2,12313 HBL1_DMSO_200M_050219_2,12313,EAEWTTPVV False False QPFEDTPVV 66.029168 516.256335437298 53955608.0 12312.0 nc|ENSG00000123485|Q8NCD3-2|HJURP;;nc|ENSG00000123485|Q8NCD3-3|HJURP;;ENST00000454020.1_3_2:234756047-234763110:-|nuORF;;ENSG00000123485|ENST00000411486|HJURP 2.669047276178996 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12314 66.03 30.0 1823200.0 25 0 273460.0 + 43999 YIDPSGFVKA 10 69 548.7875383952016 1095.5605238572032 2 548.7878906130791 MULTI CID FTMS 0 0 0 12312 1361120.625 0.5046634126609236 2 -0.1913223266601562 2 Unmodified _YIDPSGFVKA_ ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48;nc|ENSG00000090686|Q86UV5-8|USP48 40.23920728925047 0.1550410903091231 4 Y{I|L}DPS 5 5 64.341 0.0 0.0 5.8729 0.0 0.0 0.0 517.2772310846311 517.2772310846311 46.918402966525576 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.805462187404089 0.0 + Y{I|L}DPS 5.8729 + + 169 + 1 1.261 49295.3 1.0 7554 4758 12312 HBL1_DMSO_200M_050219_2,12314 HBL1_DMSO_200M_050219_2,12314,YIDPSGFVKA False True YIDPSGFVKA 66.030347 548.787890613079 46555064.0 12312.0 nc|ENSG00000090686|Q86UV5-8|USP48;;ENSG00000090686|ENST00000308271|USP48;;nc|ENSG00000090686|Q86UV5-7|USP48;;nc|ENSG00000090686|Q86UV5-2|USP48;;nc|ENSG00000090686|Q86UV5-4|USP48;;nc|ENSG00000090686|Q86UV5-3|USP48 7.191911856333415 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12315 66.032 39.0 1400600.0 25 0 195830.0 + 3961 DALNRPLNI 9 82 513.2910464478488 1024.5675399624974 2 513.2910644412041 MULTI CID FTMS 0 0 0 12312 1443041.25 1.0 0 0.0 3 Unmodified _DALNRPLNI_ ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2 66.45667989310934 0.0225072657982126 4 {[DA]|[EG]}{I|L}NR[{I|L}P]N{I|L} 9 0 + 78.707 0.0 0.0 7.682 7.682 91.209 0.0 0.0 0.0 18.865006360318688 11.517412290202673 11.517412290202673 9.208187539523747 0 2.2302046884880937 2.0 0.0 1.2302046884880935 + + {[DA]|[EG]}{I|L}NR[{I|L}P]N{I|L};{[DA]|[EG]}{I|L}GGR[{I|L}P]N{I|L};{[DA]|[EG]}{I|L}NR[{I|L}P]QV;{[DA]|[EG]}{I|L}NR[{I|L}P]GG{I|L};W{I|L}N[VG][{I|L}P]N{I|L};{[DA]|[EG]}{I|L}GGR[{I|L}P]QV;{[DA]|[EG]}{I|L}NR[{I|L}P][AG]V;{[DA]|[EG]}{I|L}NR[Q{I|L}]PV;W{I|L}N[VG][{I|L}P]QV;[{I|L}P]N[RD]{I|L}AN{I|L} 7.682;6.7832;6.5578;6.3687;5.7299;5.6591;5.2445;4.7738;4.6058;4.098 +;-;-;-;-;-;-;-;-;- + 403 + 1 1.261 44499.2 1.0 7555 4758 12312 HBL1_DMSO_200M_050219_2,12315 HBL1_DMSO_200M_050219_2,12315,DALNRPLNI True True DALNRPLNI 66.031525 513.291064441204 10581410.0 12312.0 ENSG00000105576|ENST00000425528|TNPO2;;nc|ENSG00000105576|O14787-2|TNPO2;;ENST00000588484.1_1_19:12826020-12830096:-|nuORF 6.427833557128906 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12316 66.033 57.0 1338100.0 25 0 203470.0 + 36475 TAASVLRI 8 86 415.75848804967376 829.5024231661475 2 415.7583190798759 MULTI CID FTMS 0 0 0 12312 1103907.25 0.8399324421489772 1 -0.1196136474609375 4 Unmodified _TAASVLRI_ ENSG00000119574|ENST00000594051|ZBTB45 49.93300154707207 0.1395624531867191 4 TAASV{I|L}R{I|L} 8 0 + 75.582 0.0 0.0 9.1118 9.1118 96.908 0.0 0.0 0.0 63.69807734540706 10.188514476176197 10.188514476176197 18.99288766643714 0 0.7742275032520141 2.0 0.0 0.5866968715561641 + + TAASV{I|L}R{I|L};TAA{I|L}[VS]R{I|L};TA{I|L}[SG]{I|L}R{I|L};TA{I|L}A[VS]R{I|L};T[QT]V{I|L}R{I|L} 9.1118;6.8221;6.2177;5.8256;3.097 +;-;-;-;- + 134 + 1 1.261 63672.9 1.0 7556 4758 12312 HBL1_DMSO_200M_050219_2,12316 HBL1_DMSO_200M_050219_2,12316,TAASVLRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12317 66.034 55.0 1146800.0 25 0 77920.0 + 41960 VQLDPQTVGV 10 103 528.2902244617638 1054.5658959903276 2 528.2910644412041 MULTI CID FTMS 0 0 0 12312 1013701.625 0.0595584646149728 9 -0.8132858276367188 5 Unmodified _VQLDPQTVGV_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 16.149105407346934 0.5765757077271437 4 [QP]TKKPEEV 9 8 + 50.125 0.0 0.0 4.7531 4.7531 70.583 0.0 0.0 0.0 1.9901523392237408 16.478174818886373 1.9901523392237408 1.9901523392237408 0 0.6462566630072955 0.8239087409443188 0.4247425010840047 0.2302046884880938 [QP]TKKPEEV;{[QN]|[E{I|L}]|[KN]}[RP]A{I|L}EEV;[VG]A{NN|[MP]|[D{I|L}]|[EV]}[QP]KEV;{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}[QP]KEV;{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}[QP]KEV;{[QV]|[N{I|L}]|[RA]|[KV]}{NN|[MP]|[D{I|L}]|[EV]}[QP]KEV;HHE{I|L}[HK]VGV;[QP]T[{I|L}V]{I|L}EQQ 4.7531;4.5644;2.7048;2.5565;2.334;2.104;2.0056;1.3389 -;-;-;-;-;-;-;- 272 1 1.261 58201.0 1.0 7557 4758 12312 HBL1_DMSO_200M_050219_2,12317 HBL1_DMSO_200M_050219_2,12317,VQLDPQTVGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12318 66.036 74.0 868950.0 25 0 95002.0 + 12618 GVITKGTVIEV 11 95 558.337369915768 1114.660186898336 2 558.3376953005791 MULTI CID FTMS 0 0 0 12312 823762.1875 0.631350777517577 -1 0.1002883911132812 6 Unmodified _GVITKGTVIEV_ ENSG00000164346|ENST00000610426|NSA2 75.5705956163825 0.0162609445057862 4 [VG]{I|L}TKTGV{I|L}EV 11 2 + 100.84 0.0 0.0 9.047 9.047 90.524 0.0 0.0 0.0 6.8488825619823785 15.07062321345802 6.8488825619823785 6.8488825619823785 0 1.5669015600442575 1.6989700043360187 1.8243923658886183 0.0 [VG]{I|L}TKTGV{I|L}EV;{[QN]|[E{I|L}]|[KN]}KKTGV{I|L}EV;[VG]{I|L}TKEK{I|L}EV;{[QN]|[E{I|L}]|[KN]}KKEK{I|L}EV;[{I|L}V]GTKTGV{I|L}EV;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}KTGV{I|L}EV;[VG]{I|L}TKT{I|L}[VG]EV;[{I|L}T][VG]KTGV{I|L}EV;{[QN]|[E{I|L}]|[KN]}KKT{I|L}[VG]EV;[VG]{I|L}TKTEAVVV 9.047;8.4326;7.802;7.1915;6.7801;6.7698;6.5833;6.271;5.9689;5.6712 -;-;-;-;-;-;-;-;-;- 1706 1 1.261 57955.7 1.0 7558 4758 12312 HBL1_DMSO_200M_050219_2,12318 HBL1_DMSO_200M_050219_2,12318,GVITKGTVIEV True True GVITKGTVIEV 66.036118 558.337695300579 9180015.0 12312.0 ENSG00000164346|ENST00000610426|NSA2 4.428513050079346 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12319 66.037 53.0 955570.0 25 0 157040.0 + 149 AALNGLYRV 9 71 488.7834544796976 975.5523560261952 2 488.7823974490166 MULTI CID FTMS 0 0 0 12312 792713.4375 0.6660340171927042 -1 0.1002883911132812 7 Unmodified _AALNGLYRV_ ENSG00000161671|ENST00000334976|EMC10;nc|ENSG00000161671|Q5UCC4-2|EMC10 48.345845343767074 0.0439967357579942 4 AA{I|L}NG{I|L}VHD 9 3 69.77 0.0 0.0 7.1519 0.0 0.0 0.0 82.06694971256093 82.06694971256093 59.05706522167991 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.2396518287104437 0.8494850021680094 AA{I|L}NG{I|L}VHD 7.1519 - 305 + 1 1.261 46175.7 1.0 7559 4758 12312 HBL1_DMSO_200M_050219_2,12319 HBL1_DMSO_200M_050219_2,12319,AALNGLYRV True True AALNGLYRV 66.037477 488.782397449017 18938252.0 12312.0 ENSG00000161671|ENST00000334976|EMC10;;nc|ENSG00000161671|Q5UCC4-2|EMC10 7.420148849487305 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12320 66.039 57.0 828380.0 25 0 82053.0 + 8716 EVLHSLPAV 9 79 482.7772340303453 963.5399151274906 2 482.7773620486259 MULTI CID FTMS 0 0 0 12312 745359.75 1.0 0 0.0 8 Unmodified _EVLHSLPAV_ ENSG00000163636|ENST00000295901|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;ENST00000497315.5_1_3:64004227-64005057:-|nuORF;nc|ENSG00000163636|Q15008-2|PSMD6;nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6 46.92087301778293 0.0471210510596396 4 {[TV]|[{I|L}S]}H{I|L}D{I|L} 6 6 34.831 0.0 0.0 3.6149 0.0 0.0 0.0 282.1456639890719 282.1456639890719 5.026975159433526 0.0 0.0 0.0 0 0.5 0.7958800173440752 1.274227503252014 0.0 {[TV]|[{I|L}S]}H{I|L}D{I|L} 3.6149 - 311 1 1.261 45494.4 1.0 7560 4758 12312 HBL1_DMSO_200M_050219_2,12320 HBL1_DMSO_200M_050219_2,12320,EVLHSLPAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12321 66.041 72.0 1011600.0 25 0 161920.0 + + -1 YVIDLEKGSQHL 12 78 467.91751718126017 1400.7307221439803 3 467.9176208376884 MULTI CID FTMS 0 0 0 12312 659607.4375 0.6377549629915215 -1 0.1002883911132812 9 Carbamidomethyl (C) _YVLFQIVC(Carbamidomethyl (C))GRF_ ENST00000523277.6_1_8:41399408-41399603:+|nuORF;ENSG00000147536|ENST00000276533|GINS4 4.406150317652783 0.8543594311449257 4 YV{I|L}D{I|L}EKG{[QS]|[NT]}H{I|L} 12 -1 + 89.097 0.0 0.0 6.3607 6.3607 91.177 0.0 0.0 0.0 66.42072243772333 3.402887499330731 3.402887499330731 24.258626904009446 0 0.3807196863200844 2.0 1.174742501084005 0.0 YV{I|L}D{I|L}EKG{[QS]|[NT]}H{I|L};{NN|[MP]|[D{I|L}]|[EV]}A[PS]GKE{I|L}D{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[TV]|[{I|L}S]}[WP]GKE{I|L}D{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}G[PS]GKE{I|L}D{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}A[PS][WK]{I|L}D{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}[KP][NS]E{I|L}D{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}G[PS][WK]{I|L}D{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.3607;4.6289;3.5451;3.1119;2.7988;2.0435;1.2817 -;-;-;-;-;-;- 166 + 1 1.261 62560.5 1.0 7561 4758 12312 HBL1_DMSO_200M_050219_2,12321 HBL1_DMSO_200M_050219_2,12321,YVLFQIVCGRF False False YVIDLEKGSQHL 66.040595 467.917620837688 11052262.75 12312.0 ENST00000523277.6_1_8:41399408-41399603:+|nuORF;;ENSG00000147536|ENST00000276533|GINS4 7.52403195699056 3.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12322 66.043 90.0 742850.0 25 0 92423.0 7645 EKGDDINI 8 97 452.2245382409797 902.4345235487594 2 452.2246276736259 MULTI CID FTMS 0 0 0 12312 575448.0 0.8712942045750486 1 -0.1196136474609375 10 Unmodified _EKGDDINI_ ENSG00000175354|ENST00000309660|PTPN2;ENST00000423212.1_1_1:178716132-178716684:-|nuORF;nc|ENSG00000175354|P17706-2|PTPN2;nc|ENSG00000175354|P17706-3|PTPN2;nc|ENSG00000175354|P17706-4|PTPN2 50.855029805455786 0.1352255786796883 4 {NN|[MP]|[D{I|L}]|[EV]}NSD 5 6 43.535 0.0 0.0 4.8242 0.0 0.0 0.0 355.20061176580947 355.20061176580947 15.419407820947924 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.9595083459089812 {NN|[MP]|[D{I|L}]|[EV]}NSD 4.8242 - 190 1 1.261 57318.4 1.0 7562 4758 12312 HBL1_DMSO_200M_050219_2,12322 HBL1_DMSO_200M_050219_2,12322,EKGDDINI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12323 66.044 69.0 595440.0 25 0 55559.0 + 43158 VYQNQIAEL 9 81 539.2824114645784 0 539.2822143435478 PEAK CID FTMS 0 0 0 12312 529741.375 0.6797986941813706 -1 0.1002883911132812 11 Unmodified _VYQNQIAEL_ ENSG00000075884|ENST00000295095|ARHGAP15;ENST00000549060.1_1_2:144464133-144525738:+|nuORF 36.04419817259434 0.0811646137502998 4 {I|L}VYQ 4 7 16.402 0.0 0.0 1.5236 0.0 0.0 331.1760767359943 239.078912603186 570.2549893391803 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 {I|L}VYQ 1.5236 - 40 + 1 1.261 36845.3 1.0 7563 4758 12312 HBL1_DMSO_200M_050219_2,12323 HBL1_DMSO_200M_050219_2,12323,VYQNQIAEL True True VYQNQIAEL 66.044218 539.282214343548 6314176.5 12312.0 ENSG00000075884|ENST00000295095|ARHGAP15;;ENST00000549060.1_1_2:144464133-144525738:+|nuORF 4.561789194742839 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12324 66.054 573.0 420710.0 25 0 31656.0 + -1 LSKIRCLMDLH 11 127 701.3724561486831 1400.730359364166 2 701.3719360232353 MULTI CID FTMS 0 0 0 12312 348884.25 0.7049162627901594 -1 0.1002883911132812 12 Carbamidomethyl (C),Oxidation (M) _LSKIRC(Carbamidomethyl (C))LM(Oxidation (M))DLH_ REV__ENSG00000185760|ENST00000370398|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-2|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-3|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-5|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-6|KCNQ5;REV__nc|ENSG00000185760|Q9NR82-7|KCNQ5 16.149105407346934 0.6992268271266642 4 YV{I|L}D{I|L}EKGSQ{I|L}H 12 -1 + 116.13 0.0 0.0 8.2907 8.2907 94.532 0.0 0.0 0.0 71.07190540797605 16.15865011156764 16.15865011156764 12.593083718189206 0 2.353917193908117 2.0 1.555462187404089 0.3494850021680094 YV{I|L}D{I|L}EKGSQ{I|L}H;YV{I|L}D{I|L}EKGS[AG]{I|L}H;YV{I|L}D{I|L}{I|L}[SG]GSQ{I|L}H;YV{I|L}D{I|L}{I|L}[NS]SQ{I|L}H;YV{I|L}D{I|L}[WK]SQ{I|L}H;YV{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}KE[YV];YV{I|L}D{I|L}E[RH]{I|L}M{I|L};YV{I|L}D{I|L}EVV{[DS]|[MA]|[CV]|TT}{I|L}H;YV{I|L}D{I|L}EK[QA][VS]H;YV{I|L}D{I|L}EKGAA[VS]H 8.2907;7.3917;6.9427;6.8092;6.7324;6.659;6.5275;6.4945;6.2391;6.2142 -;-;-;-;-;-;-;-;-;- 3935 + 1 1.261 171821.0 1.0 7564 4758 12312 HBL1_DMSO_200M_050219_2,12324 HBL1_DMSO_200M_050219_2,12324,LSKIRCLMDLH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12325 66.056 64.0 514290.0 25 0 42151.0 -1 ISDMLVIEAI 10 71 560.3002234797975 1118.585894026395 2 560.3010742068291 MULTI CID FTMS 0 0 0 12312 177063.28125 1.0 0 0.0 13 Oxidation (M) _ISDM(Oxidation (M))LVIEAI_ ENSG00000013375|ENST00000513973|PGM3;nc|ENSG00000013375|O95394-3|PGM3;nc|ENSG00000013375|O95394-4|PGM3 6.723162845929126 0.6955379296933136 4 {I|L} 1 -1 13.495 0.0 0.0 1.2064 0.0 0.0 987.4909213474872 0.0 987.4909213474872 0.0 4.030899869919438 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2064 + + 51 + 1 1.261 35003.3 1.0 7565 4758 12312 HBL1_DMSO_200M_050219_2,12325 HBL1_DMSO_200M_050219_2,12325,ISDMLVIEAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12326 66.07 800.0 266180.0 25 0 33108.0 + 40335 VHLETILGA 9 212 476.77726771925535 951.5399825053108 2 476.7769348025322 MULTI CID FTMS 0 0 0 12312 185561.96875 1.0 0 0.0 14 Unmodified _VHLETILGA_ ENSG00000165591|ENST00000374900|FAAH2 56.541270873467816 0.0279970378729908 4 [HV]{I|L}ET{I|L}{I|L}Q 8 2 + 48.633 0.0 0.0 5.111 5.111 85.26 0.0 0.0 0.0 15.48455006504028 31.64320017660792 15.48455006504028 17.850624799909838 0 0.6989700043360187 1.0 0.9247425010840048 0.0 [HV]{I|L}ET{I|L}{I|L}Q;{[QN]|[E{I|L}]|[KN]}HVT{I|L}{I|L}Q;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}TV{M(Oxidation (M))|F}T{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[{M(Oxidation (M))|F}T]{I|L}TV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[{M(Oxidation (M))|F}T]{I|L}S{I|L};[AG]P[PG]VT{I|L}{I|L}Q;[QP][PG]VT{I|L}{I|L}Q;[{I|L}T]H{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}Q;{[QN]|[E{I|L}]|[KN]}H[{I|L}T]V{I|L}Q;[{I|L}T]H{[QN]|[E{I|L}]|[KN]}V{I|L}Q 5.111;3.235;2.753;2.5679;2.5679;2.0838;1.8507;1.8367;1.2746;0.79595 -;-;-;-;-;-;-;-;-;- 783 1 1.261 161971.0 0.9399999976158142 7566 4758 12312 HBL1_DMSO_200M_050219_2,12326 HBL1_DMSO_200M_050219_2,12326,VHLETILGA True True VHLETILGA 66.06965 476.776934802532 2909562.75 12312.0 ENSG00000165591|ENST00000374900|FAAH2 3.208308378855387 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12327 66.083 749.0 296870.0 25 0 14040.0 + 32083 RVLPPSALQSV 11 202 583.8482282329863 1165.6819035327726 2 583.8488036990166 MULTI CID FTMS 0 0 0 12312 174902.9375 0.3095292003222217 36 -2.6683883666992188 15 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 53.4695610476455 0.0984156443811599 4 P[PS]A{I|L}QSV 8 3 47.631 0.0 0.0 4.0861 0.0 0.0 368.2538929646551 0.0 368.2538929646551 0.0 30.97540984399934 0.0 0.0 0 1.2288559305164175 0.0 0.9247425010840048 0.0 + P[PS]A{I|L}QSV 4.0861 + + 2352 1 1.261 171300.9 1.0 7567 4758 12312 HBL1_DMSO_200M_050219_2,12327 HBL1_DMSO_200M_050219_2,12327,RVLPPSALQSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12328 66.096 800.0 410460.0 25 0 23724.0 40133 VGLPVQTL 8 115 826.4998683130669 825.4925918464669 1 827.4964477419853 MULTI CID FTMS 0 0 0 12312 183921.234375 0.2723405142388011 -3 0.2121353149414062 16 Unmodified _VGLPVQTL_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 15.768221252438446 0.6779680726941459 4 [QA]VAAVVA 8 8 48.56 0.0 0.0 5.8826 0.0 0.0 0.0 113.05648636731964 113.05648636731964 9.174611547992171 0.0 0.0 0.0 0 0.0 0.721246399047171 0.0 1.9188265215345564 [QA]VAAVVA 5.8826 - 10155 1 1.261 221926.7 1.0 7568 4758 12312 HBL1_DMSO_200M_050219_2,12328 HBL1_DMSO_200M_050219_2,12328,VGLPVQTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12329 66.101 267.0 862860.0 25 0 142560.0 + + 37485 FTIDVDKKL 9 168 360.210283998202 1077.609022594806 3 360.2111999392509 MULTI CID FTMS 0 0 0 12312 157845.515625 0.243425183906609 -2 0.150543212890625 17 Unmodified _TLFLSQEKI_ nc|ENSG00000112984|O95235-2|KIF20A;ENSG00000112984|ENST00000394894|KIF20A 32.30548876998284 0.1201446275138228 4 {M(Oxidation (M))|F}T{I|L}DVDKK{I|L} 9 -1 + 65.276 0.0 0.0 6.0575 6.0575 80.921 0.0 0.0 0.0 -4.751966658018489 11.962724883926654 -4.751966658018489 4.827796776480469 0 0.2614393726401688 0.0 0.4247425010840047 0.1861818737241735 {M(Oxidation (M))|F}T{I|L}DVDKK{I|L};{M(Oxidation (M))|F}{I|L}TDVDKK{I|L};{M(Oxidation (M))|F}T{I|L}DV[TA]AK{I|L};{M(Oxidation (M))|F}T{I|L}D[WR]K{I|L};{M(Oxidation (M))|F}T{I|L}D{[SA]|[TG]}{I|L}AK{I|L};{M(Oxidation (M))|F}{I|L}TDV[TA]AK{I|L};KK[{M(Oxidation (M))|F}V]VD{I|L}TE;{M(Oxidation (M))|F}{I|L}TD[WR]K{I|L};[{I|L}T][KQ][{M(Oxidation (M))|F}V]{I|L}TE;{M(Oxidation (M))|F}{I|L}TD{[SA]|[TG]}{I|L}AK{I|L} 6.0575;5.6095;4.8077;4.4384;4.3649;4.3597;4.0808;3.9904;3.9344;3.9169 -;-;-;-;-;-;-;-;-;- 985 + 1 1.261 187243.7 1.0 7569 4758 12312 HBL1_DMSO_200M_050219_2,12329 HBL1_DMSO_200M_050219_2,12329,TLFLSQEKI False False FTIDVDKKL 66.101412 360.211199939251 4046896.0 12312.0 nc|ENSG00000112984|O95235-2|KIF20A;;ENSG00000112984|ENST00000394894|KIF20A 4.432904799779256 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12330 66.117 800.0 350030.0 25 0 24067.0 + -1 HRRCRCRRCRC 11 155 866.9068741437397 1731.7991953542794 2 867.9091064333916 MULTI CID FTMS 0 0 0 12312 155681.3125 0.566770222197092 2 -0.1913223266601562 18 4 Carbamidomethyl (C) _HRRC(Carbamidomethyl (C))RC(Carbamidomethyl (C))RRC(Carbamidomethyl (C))RC(Carbamidomethyl (C))_ REV__ENST00000569981.2_1_16:29820228-29821657:-|nuORF 0.3070304955306653 0.8736993455979228 4 [{I|L}P]VGTTYMDW{I|L}D 12 -1 58.52 0.0 0.0 3.3791 0.0 0.0 0.0 337.1160648213294 337.1160648213294 20.523684149681635 0.0 0.0 0.0 0 0.0 1.154901959985743 0.9247425010840048 0.0 [{I|L}P]VGTTYMDW{I|L}D 3.3791 - 34436 1 1.261 187176.5 0.9300000071525574 7570 4758 12312 HBL1_DMSO_200M_050219_2,12330 HBL1_DMSO_200M_050219_2,12330,HRRCRCRRCRC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12331 66.131 800.0 191700.0 25 0 22415.0 -1 0 125 925.4263474816362 1848.8381420300725 2 925.4299804568292 MULTI CID FTMS 0 0 0 12312 130836.828125 0.9839613106719622 1 -0.1196136474609375 19 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NE{I|L}AEM{I|L}{[ET]|[MV]}{[QS]|[NT]} 16 -1 + 58.889 0.0 0.0 3.1852 3.1852 62.924 0.0 0.0 0.0 26.03540095567041 16.170664226808626 16.170664226808626 0.7082530717588753 0 0.8807196863200843 0.0 1.1307196863200843 1.41944517631652 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NE{I|L}AEM{I|L}{[ET]|[MV]}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NE{I|L}AEM{[ET]|[MV]}{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NEA{I|L}EM{I|L}{[ET]|[MV]}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NEA{I|L}EM{[ET]|[MV]}{I|L}{[QS]|[NT]};{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NE{I|L}AEM{I|L}{[ET]|[MV]}{[QS]|[NT]};{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NE{I|L}AEM{[ET]|[MV]}{I|L}{[QS]|[NT]};{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NEA{I|L}EM{I|L}{[ET]|[MV]}{[QS]|[NT]};{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NEA{I|L}EM{[ET]|[MV]}{I|L}{[QS]|[NT]};[TP][HQ]{I|L}MEA{I|L}EN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[TP][HQ]{I|L}ME{I|L}AEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.1852;3.1469;3.0899;3.0516;2.5222;2.4839;2.4269;2.3886;2.2467;2.1515 -;-;-;-;-;-;-;-;-;- 8029 + 1 1.261 101428.7 0.8899999856948853 7571 4758 12312 HBL1_DMSO_200M_050219_2,12331 HBL1_DMSO_200M_050219_2,12331, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12332 66.144 800.0 157900.0 25 0 9396.3 + 28796 PYNLRSREASW 11 132 689.8495666581956 1377.6845803831911 2 690.3511230349541 MULTI CID FTMS 0 0 0 12312 124071.1484375 1.0 0 0.0 20 Unmodified _PYNLRSREASW_ REV__ENSG00000099250|ENST00000374867|NRP1;REV__nc|ENSG00000099250|O14786-2|NRP1;REV__nc|ENSG00000099250|O14786-3|NRP1 18.1463463914782 0.6576820063886638 4 [DV]GM{I|L}GV 7 -1 28.206 0.0 0.0 2.0474 0.0 0.0 0.0 703.3294527799286 703.3294527799286 13.527101894032576 0.0 0.0 0.0 0 0.0 0.585026652029182 0.4916440611282626 0.0 [DV]GM{I|L}GV 2.0474 - 2724 1 1.261 91611.0 0.9200000166893004 7572 4758 12312 HBL1_DMSO_200M_050219_2,12332 HBL1_DMSO_200M_050219_2,12332,PYNLRSREASW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12334 66.149 20.0 3288000.0 25 0 532160.0 + 44616 YPFKPPKI 8 82 330.5324354067559 988.5754768204677 3 330.5320922732353 MULTI CID FTMS 0 0 0 12333 1930328.0 0.1767550395470272 5 -0.4948501586914062 1 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 16.942295170755138 0.6606234159769251 4 Y{I|L}MKPPK{I|L} 8 2 + 41.623 0.0 0.0 4.2104 4.2104 82.681 0.0 0.0 0.0 14.783627875812416 7.289332277134619 7.289332277134619 27.00441289091096 0 0.0 0.0 0.0 0.0 Y{I|L}MKPPK{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}YPPK{I|L} 4.2104;1.4788 -;- 146 + 1 1.272 58622.0 1.0 7573 4759 12333 HBL1_DMSO_200M_050219_2,12334 HBL1_DMSO_200M_050219_2,12334,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12335 66.15 57.0 1244400.0 25 0 60585.0 -1 0 76 917.4333386407358 0 917.4320556521416 PEAK CID FTMS 0 0 0 12333 1543798.25 0.6863030637389467 1 -0.0717086791992187 2 4 PN{I|L}NEAQ{[SA]|[TG]}[QP]N{I|L} 13 -1 53.313 0.0 0.0 2.9087 0.0 0.0 245.08498007422105 208.073053228186 453.15803330240703 0.0 0.0 0.0 0.0 0 0.6382104921644451 0.0 0.0 1.1861818737241734 PN{I|L}NEAQ{[SA]|[TG]}[QP]N{I|L} 2.9087 - 361 + 1 1.272 51978.7 1.0 7574 4759 12333 HBL1_DMSO_200M_050219_2,12335 HBL1_DMSO_200M_050219_2,12335, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12336 66.151 25.0 2212300.0 25 0 505520.0 120 AALAALALA 9 70 392.748883825661 783.4832147181221 2 392.7485839724541 MULTI CID FTMS 0 0 0 12333 2409418.5 0.8449107615009237 -1 0.1196136474609375 3 Unmodified _AALAALALA_ ENSG00000170801|ENST00000307358|HTRA3;ENSG00000267221|ENST00000587304|C17orf113;nc|ENSG00000170801|P83110-2|HTRA3;REV__ENSG00000131507|ENST00000253814|NDFIP1;REV__ENST00000509436.1_1_5:141488539-141511465:+|nuORF;REV__nc|ENSG00000131507|Q9BT67-2|NDFIP1 0.0 0.9146841635160942 4 P 1 9 1.1092 0.0 0.0 0.14158 0.0 0.0 563.3518650860893 120.05079065494374 683.4026557410331 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.14158 - 4 + 1 1.272 52256.1 1.0 7575 4759 12333 HBL1_DMSO_200M_050219_2,12336 HBL1_DMSO_200M_050219_2,12336,AALAALALA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12337 66.153 37.0 1433300.0 25 0 183550.0 + 16741 KFIDKQLEL 9 86 567.3319875185043 1132.6494221038083 2 567.3321411013603 MULTI CID FTMS 0 0 0 12333 1409480.25 0.9660494321638484 1 -0.0717086791992187 4 Unmodified _KFIDKQLEL_ ENSG00000116688|ENST00000235329|MFN2;nc|ENSG00000116688|O95140-2|MFN2 51.487983226225225 0.0371074584807926 4 {M(Oxidation (M))|F}{I|L}DQK{I|L}E{I|L} 8 3 67.465 0.0 0.0 5.9564 0.0 0.0 128.09536940742345 0.0 128.09536940742345 0.0 48.577541258518266 0.0 0.0 0 1.9916440611282624 0.0 0.8494850021680094 0.3494850021680094 {M(Oxidation (M))|F}{I|L}DQK{I|L}E{I|L} 5.9564 - 517 1 1.272 44206.1 1.0 7576 4759 12333 HBL1_DMSO_200M_050219_2,12337 HBL1_DMSO_200M_050219_2,12337,KFIDKQLEL True True KFIDKQLEL 66.152593 567.33214110136 15754831.75 12333.0 ENSG00000116688|ENST00000235329|MFN2;;nc|ENSG00000116688|O95140-2|MFN2 3.766603390375773 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12338 66.154 44.0 1537000.0 25 0 129070.0 + 33201 SFIENSSAL 9 99 484.24113188485234 966.4677108365048 2 484.2402221560478 MULTI CID FTMS 0 0 0 12333 851256.6875 0.9999758451197892 -2 0.2199020385742187 5 Unmodified _SFIENSSAL_ chr6:24875817-25041851|39|34.38|0.79|5.45|-|ENST00000510784|RIPOR2,RIPOR2;ENSG00000111913|ENST00000643898|RIPOR2;nc|ENSG00000111913|Q9Y4F9-2|RIPOR2;nc|ENSG00000111913|Q9Y4F9|RIPOR2 15.847184025352805 0.4077185912009129 4 [DP]T 3 9 28.684 0.0 0.0 2.968 0.0 0.0 0.0 650.3241625937902 650.3241625937902 9.899093853315076 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 [DP]T 2.968 - 211 1 1.272 56589.6 1.0 7577 4759 12333 HBL1_DMSO_200M_050219_2,12338 HBL1_DMSO_200M_050219_2,12338,SFIENSSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12339 66.155 42.0 1164600.0 25 0 145920.0 + 45884 YYRFGQVY 8 72 548.266814087403 1094.5190752416058 2 548.2669555544853 MULTI CID FTMS 0 0 0 12333 848838.5 1.0 0 0.0 6 Unmodified _YYRFGQVY_ ENSG00000134910|ENST00000392708|STT3A;ENST00000526364.1_1_11:125488416-125491330:+|nuORF;nc|ENSG00000134910|P46977-2|STT3A 30.22481116460888 0.4082965392918993 4 YVY 3 5 29.297 0.0 0.0 2.6767 0.0 0.0 651.3130970685562 0.0 651.3130970685562 0.0 -0.1009061466849203 -0.1009061466849203 0.0 0 0.8494850021680094 0.0 0.0 0.0 YVY 2.6767 - 121 1 1.272 45146.3 1.0 7578 4759 12333 HBL1_DMSO_200M_050219_2,12339 HBL1_DMSO_200M_050219_2,12339,YYRFGQVY False True YYRFGQVY 66.155009 548.266955554485 6823359.5 12333.0 ENST00000526364.1_1_11:125488416-125491330:+|nuORF;;nc|ENSG00000134910|P46977-2|STT3A;;ENSG00000134910|ENST00000392708|STT3A 4.471750736236572 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12340 66.157 67.0 876070.0 25 0 77018.0 + 25377 NAYPNTPYI 9 98 526.7562320312397 1051.4979111292794 2 526.7563964724541 MULTI CID FTMS 0 0 0 12333 814730.125 1.0 0 0.0 7 Unmodified _NAYPNTPYI_ ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A 71.13359017698441 0.0206607516130725 4 TPY{I|L} 4 5 25.878 0.0 0.0 2.4611 0.0 0.0 559.2406001935357 0.0 559.2406001935357 0.0 -0.0907813519353695 -0.0907813519353695 0.0 0 0.4247425010840047 0.0 0.5 0.0 + TPY{I|L} 2.4611 + + 285 + 1 1.272 51904.5 1.0 7579 4759 12333 HBL1_DMSO_200M_050219_2,12340 HBL1_DMSO_200M_050219_2,12340,NAYPNTPYI True True NAYPNTPYI 66.156622 526.756396472454 7344575.0 12333.0 nc|ENSG00000138674|O94979-8|SEC31A;;ENSG00000138674|ENST00000395310|SEC31A;;nc|ENSG00000138674|O94979-9|SEC31A;;nc|ENSG00000138674|O94979-2|SEC31A;;nc|ENSG00000138674|O94979-10|SEC31A;;nc|ENSG00000138674|O94979-7|SEC31A;;nc|ENSG00000138674|O94979-4|SEC31A 7.346647580464681 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12341 66.158 48.0 1371200.0 25 0 115310.0 + 44622 YPFKPPKI 8 89 495.2945804491195 988.574607965039 2 495.2948181033134 MULTI CID FTMS 0 0 0 12333 769667.0625 0.1670594941312334 5 -0.4948501586914062 8 Unmodified _YPFKPPKI_ ENSG00000072401|ENST00000373910|UBE2D1;ENSG00000185651|ENST00000342192|UBE2L3;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 30.22481116460888 0.4082965392918993 4 YP{M(Oxidation (M))|F}K[KP]P{I|L} 8 2 + 57.939 0.0 0.0 5.8608 5.8608 89.303 0.0 0.0 0.0 38.80897353549226 0.2479108830623388 0.2479108830623388 24.771212547196622 0 0.6237125054200234 2.0 0.0 0.0 YP{M(Oxidation (M))|F}K[KP]P{I|L};{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}K[KP]P{I|L} 5.8608;3.3551 -;- 137 + 1 1.272 54718.5 1.0 7580 4759 12333 HBL1_DMSO_200M_050219_2,12341 HBL1_DMSO_200M_050219_2,12341,YPFKPPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12342 66.159 65.0 1288700.0 25 0 143670.0 2088 APRACQLSVV 10 111 348.52618137837345 1042.5567147353204 3 348.5257751345634 MULTI CID FTMS 0 0 0 12333 775052.5625 0.6062859077811714 1 -0.0717086791992187 9 Unmodified _APRACQLSVV_ ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 11.640296217721598 0.652229146672156 4 [PA]A{I|L}KV 6 5 32.14 0.0 0.0 3.0828 0.0 0.0 0.0 460.1594115901142 460.1594115901142 14.910031788769974 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [PA]A{I|L}KV 3.0828 - 397 1 1.272 81744.0 1.0 7581 4759 12333 HBL1_DMSO_200M_050219_2,12342 HBL1_DMSO_200M_050219_2,12342,APRACQLSVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12343 66.161 70.0 595740.0 25 0 82070.0 + 18280 KVIGENDITL 10 63 551.311223066452 1100.607893199704 2 551.3111450076103 MULTI CID FTMS 0 0 0 12333 713007.0 0.4387871746168111 5 -0.4948501586914062 10 Unmodified _KVIGENDITL_ ENSG00000150712|ENST00000382142|MTMR12;nc|ENSG00000150712|Q9C0I1-2|MTMR12;nc|ENSG00000150712|Q9C0I1-3|MTMR12 33.4449034751529 0.2267874087365337 4 ND{I|L}T{I|L} 5 5 45.793 0.0 0.0 4.1607 0.0 0.0 526.3112660138687 0.0 526.3112660138687 0.0 23.328460118795785 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.3807196863200844 + ND{I|L}T{I|L} 4.1607 + + 47 1 1.272 43143.6 1.0 7582 4759 12333 HBL1_DMSO_200M_050219_2,12343 HBL1_DMSO_200M_050219_2,12343,KVIGENDITL False True KVIGENDITL 66.161138 551.31114500761 20418862.0 12333.0 nc|ENSG00000150712|Q9C0I1-3|MTMR12;;nc|ENSG00000150712|Q9C0I1-2|MTMR12;;ENSG00000150712|ENST00000382142|MTMR12 4.696475346883138 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12344 66.162 40.0 1191400.0 25 0 100670.0 + 44527 YPDRVPVI 8 82 479.7724680190831 957.5303831049662 2 479.7707397341728 MULTI CID FTMS 0 0 0 12333 689474.9375 0.3122667255594284 -6 0.5387039184570312 11 Unmodified _YPDRVPVI_ ENSG00000034713|ENST00000037243|GABARAPL2;ENSG00000139112|ENST00000266458|GABARAPL1;ENSG00000170296|ENST00000302386|GABARAP;nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 26.268140514670165 0.4916104673212489 4 YP 2 6 35.573 0.0 0.0 3.7151 0.0 0.0 0.0 694.3899630182249 694.3899630182249 -0.0663008255898489 0.0 -0.0663008255898489 0.0 0 0.0 1.6989700043360187 0.0 0.0 + YP 3.7151 + + 62 + 1 1.272 42901.2 1.0 7583 4759 12333 HBL1_DMSO_200M_050219_2,12344 HBL1_DMSO_200M_050219_2,12344,YPDRVPVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12345 66.164 76.0 1036300.0 25 0 83480.0 + 22341 LPSPLITKQ 9 109 498.8081792005347 995.6018054678694 2 498.8080932497978 MULTI CID FTMS 0 0 0 12333 592035.875 0.0022345332827453 32 -2.241401672363281 12 Unmodified _LPSPLITKQ_ ENSG00000097096|ENST00000341460|SYDE2 36.506200033944 0.094635877243972 4 {I|L}PS 3 6 47.663 0.0 0.0 4.7874 0.0 0.0 0.0 695.4106784850215 695.4106784850215 13.444991362330684 0.0 0.0 0.0 0 0.6109243748081782 1.154901959985743 0.3807196863200844 0.0 + {I|L}PS 4.7874 + + 663 + 1 1.272 64964.4 1.0 7584 4759 12333 HBL1_DMSO_200M_050219_2,12345 HBL1_DMSO_200M_050219_2,12345,LPSPLITKQ True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12346 66.166 116.0 326850.0 25 0 50857.0 + 44813 YPNKYESII 9 64 563.7929533723128 1125.5713538114255 2 563.7933227419853 MULTI CID FTMS 0 0 0 12333 439080.875 0.1643326865718983 4 -0.35516357421875 13 Unmodified _YPNKYESII_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 34.40172386719151 0.1061884637610825 4 [NP]KYESY{I|L}{I|L} 9 2 + 49.562 0.0 0.0 4.4032 4.4032 80.729 0.0 0.0 0.0 4.137342758552691 12.751218656855698 4.137342758552691 10.996075289514089 0 0.3252574989159953 0.0 0.4247425010840047 0.0 [NP]KYESY{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}T]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{I|L}{I|L};[NP]KYES{I|L}Y{I|L};[NP]KY[YT]D{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}T]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Y{I|L};{[TV]|[{I|L}S]}HH{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{I|L}{I|L};{[TV]|[{I|L}S]}HH{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}Y{I|L} 4.4032;3.4263;3.202;2.5809;2.2251;2.2085;1.0073 -;-;-;-;-;-;- 177 1 1.272 36156.3 1.0 7585 4759 12333 HBL1_DMSO_200M_050219_2,12346 HBL1_DMSO_200M_050219_2,12346,YPNKYESII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12347 66.177 587.0 418170.0 25 0 104450.0 + 42076 VQVVLVPI 8 177 433.7878335259624 865.5611141187247 2 433.7880737185478 MULTI CID FTMS 0 0 0 12333 385221.5625 0.7352226076408557 -1 0.1196136474609375 14 Unmodified _VQVVLVPI_ REV__ENST00000357037.5_1_17:40556259-40556487:-|nuORF 0.6903765706972694 0.8201419426409876 4 V 1 -1 9.3323 0.0 0.0 1.0782 0.0 0.0 748.4814154876685 0.0 748.4814154876685 0.0 -0.0648248858218369 -0.0648248858218369 0.0 0 0.0 0.0 0.0 0.0 V 1.0782 + + 17 + 1 1.272 187354.1 1.0 7586 4759 12333 HBL1_DMSO_200M_050219_2,12347 HBL1_DMSO_200M_050219_2,12347,VQVVLVPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12348 66.179 76.0 1223500.0 25 0 174480.0 + 4561 DAYRDLPRL 9 95 373.53687956765054 1117.5888093031515 3 373.5365173220634 MULTI CID FTMS 0 0 0 12333 333953.46875 1.0 0 0.0 15 Unmodified _DAYRDLPRL_ ENSG00000101391|ENST00000346416|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-2|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-4|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-5|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-6|CDK5RAP1;nc|ENSG00000101391|Q96SZ6|CDK5RAP1 27.628801355627647 0.1796483985696185 4 DA{I|L} 3 6 49.085 0.0 0.0 4.3921 0.0 0.0 0.0 815.4175782307101 815.4175782307101 35.98619869140633 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 DA{I|L} 4.3921 - 37 + 1 1.272 83508.7 1.0 7587 4759 12333 HBL1_DMSO_200M_050219_2,12348 HBL1_DMSO_200M_050219_2,12348,DAYRDLPRL False True DAYRDLPRL 66.178503 373.536517322063 4672546.0 12333.0 nc|ENSG00000101391|Q96SZ6-5|CDK5RAP1;;nc|ENSG00000101391|Q96SZ6|CDK5RAP1;;nc|ENSG00000101391|Q96SZ6-4|CDK5RAP1;;nc|ENSG00000101391|Q96SZ6-6|CDK5RAP1;;ENSG00000101391|ENST00000346416|CDK5RAP1;;nc|ENSG00000101391|Q96SZ6-2|CDK5RAP1 3.402483940124512 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12349 66.183 242.0 302360.0 25 0 16114.0 + 37003 TFPAYPGSSSM 11 120 572.7527411877822 1143.4909294423644 2 572.7531005740166 MULTI CID FTMS 0 0 0 12333 272938.28125 0.9592030181312354 1 -0.0717086791992187 16 Unmodified _TFPAYPGSSSM_ ENSG00000004975|ENST00000005340|DVL2;ENST00000571745.1_1_17:7130492-7131139:-|nuORF;ENST00000576840.5_1_17:7130280-7131353:-|nuORF 39.94969957227396 0.2131707853268865 4 {[{M(Oxidation (M))|F}C]|[YS]}T{[NV]|[RG]}[KQ]SSM 10 7 + 28.834 0.0 0.0 2.5216 2.5216 68.695 0.0 0.0 0.0 6.609606101157251 11.801116219311478 6.609606101157251 4.692489407922249 0 0.5 0.0 1.0189301784845295 0.0 {[{M(Oxidation (M))|F}C]|[YS]}T{[NV]|[RG]}[KQ]SSM;{[{M(Oxidation (M))|F}C]|[YS]}T{[NV]|[RG]}Y[PA]VM;{[{M(Oxidation (M))|F}C]|[YS]}T{[NV]|[RG]}{[TV]|[{I|L}S]}MVM;{[{M(Oxidation (M))|F}C]|[YS]}[WK][KQ]SSM;{[{M(Oxidation (M))|F}C]|[YS]}T{[NV]|[RG]}{[TV]|[{I|L}S]}ETM;{[{M(Oxidation (M))|F}C]|[YS]}[WK]{[TV]|[{I|L}S]}MVM;{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}Y{[NV]|[RG]}T[EC];{[{M(Oxidation (M))|F}C]|[YS]}T[Q{I|L}][R{M(Oxidation (M))|F}]VM;{[{M(Oxidation (M))|F}C]|[YS]}T{[NV]|[RG]}Y{[VA]|[{I|L}G]}PM;[{M(Oxidation (M))|F}T][PA]Y{[NV]|[RG]}T[EC] 2.5216;2.1113;2.0269;1.9504;1.7051;1.4557;1.4052;1.366;1.3545;1.2773 -;-;-;-;-;-;-;-;-;- 431 + 1 1.272 59318.6 1.0 7588 4759 12333 HBL1_DMSO_200M_050219_2,12349 HBL1_DMSO_200M_050219_2,12349,TFPAYPGSSSM False True TFPAYPGSSSM 66.183026 572.753100574017 4761461.0 12333.0 ENST00000576840.5_1_17:7130280-7131353:-|nuORF;;ENSG00000004975|ENST00000005340|DVL2;;ENST00000571745.1_1_17:7130492-7131139:-|nuORF 5.54059632619222 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12350 66.185 71.0 1188500.0 25 0 105160.0 + 27943 PLVAHPILK 9 117 494.3209131022923 986.6272732713846 2 494.3209716677666 MULTI CID FTMS 0 0 0 12333 264932.875 0.6844600869565287 -1 0.1196136474609375 17 Unmodified _PLVAHPILK_ REV__ENSG00000162522|ENST00000401073|KIAA1522;REV__nc|ENSG00000162522|Q9P206-3|NHSL3;REV__nc|ENSG00000162522|Q9P206|NHSL3 12.531546534597751 0.4974689918368763 4 {I|L}P 2 -1 41.454 0.0 0.0 4.2016 0.0 0.0 0.0 773.4698090469179 773.4698090469179 29.463950151760656 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}P 4.2016 - 121 + 1 1.272 68007.3 1.0 7589 4759 12333 HBL1_DMSO_200M_050219_2,12350 HBL1_DMSO_200M_050219_2,12350,PLVAHPILK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12351 66.195 603.0 568420.0 25 0 30660.0 + 18530 KYQPRIAVF 9 214 561.3270033384384 1120.6394537436768 2 561.3272582888603 MULTI CID FTMS 0 0 0 12333 241982.765625 0.2268000076620748 -2 0.2199020385742187 18 Unmodified _KYQPRIAVF_ ENSG00000139372|ENST00000392872|TDG 53.40400417844725 0.0329064971918313 4 KYQP 4 5 44.157 0.0 0.0 3.9403 0.0 0.0 0.0 601.3497220345923 601.3497220345923 10.5818452301162 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.3054621874040891 + KYQP 3.9403 + + 884 + 1 1.272 252469.0 1.0 7590 4759 12333 HBL1_DMSO_200M_050219_2,12351 HBL1_DMSO_200M_050219_2,12351,KYQPRIAVF True True KYQPRIAVF 66.19523 561.32725828886 20455040.0 12333.0 ENSG00000139372|ENST00000392872|TDG 5.3283131917317705 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12352 66.202 389.0 334460.0 25 0 36048.0 -1 0 156 334.72665104705254 667.4387491609051 2 334.7261230349541 MULTI CID FTMS 0 0 0 12333 222586.734375 1.0 0 0.0 19 4 AV{I|L}{I|L}[RP] 6 -1 + 69.213 0.0 0.0 10.37 10.37 97.294 0.0 0.0 0.0 60.88554074136319 8.512196779647638 8.512196779647638 17.481880270062007 0 0.4247425010840047 2.0 0.0 0.6549471895720985 AV{I|L}{I|L}[RP];AV{I|L}[RP]{I|L} 10.37;7.7507 -;- 82 + 1 1.272 105258.5 1.0 7591 4759 12333 HBL1_DMSO_200M_050219_2,12352 HBL1_DMSO_200M_050219_2,12352, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12353 66.216 800.0 276100.0 25 0 15852.0 + + 27828 LPPYVSNM 8 205 460.7309736248951 919.4473943165902 2 460.7309448122978 MULTI CID FTMS 0 0 0 12333 152185.203125 0.9192640830740352 -2 0.2199020385742187 20 Unmodified _PLPYVSNM_ ENSG00000105875|ENST00000354475|WDR91;nc|ENSG00000105875|A4D1P6-2|WDR91;ENST00000466182.5_1_7:134882699-134896254:-|nuORF;ENST00000485942.1_1_7:134889192-134891883:-|nuORF;nc|ENSG00000105875|A4D1P6-3|WDR91 56.04830969593885 0.114297258605095 4 [{I|L}P]{M(Oxidation (M))|F}V{I|L}S[MN] 8 -1 + 35.358 0.0 0.0 3.8456 3.8456 67.605 0.0 0.0 0.0 2.632414347745808 2.4742501084004687 2.4742501084004687 2.218487496163561 0 0.3252574989159953 1.5228787452803376 0.3054621874040891 0.0 [{I|L}P]{M(Oxidation (M))|F}V{I|L}S[MN];[{I|L}P]{M(Oxidation (M))|F}{I|L}VS[MN];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}S[MN];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PV{I|L}S[MN];[{I|L}P]{M(Oxidation (M))|F}VS{I|L}[MN];[{I|L}P]PYVS[MN];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}VS[MN];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPS{I|L}[MN];[{I|L}P]{M(Oxidation (M))|F}VSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[TV]|[{I|L}S]}QQ{I|L}S[MN] 3.8456;3.6043;3.5593;3.2319;3.2172;3.1715;2.9906;2.9309;2.7532;2.7387 -;-;-;-;-;+;-;-;-;- + 1587 1 1.272 171097.2 0.8999999761581421 7592 4759 12333 HBL1_DMSO_200M_050219_2,12353 HBL1_DMSO_200M_050219_2,12353,PLPYVSNM False False LPPYVSNM 66.216007 460.730944812298 3008462.25 12333.0 ENSG00000105875|ENST00000354475|WDR91;;nc|ENSG00000105875|A4D1P6-2|WDR91;;ENST00000466182.5_1_7:134882699-134896254:-|nuORF;;ENST00000485942.1_1_7:134889192-134891883:-|nuORF;;nc|ENSG00000105875|A4D1P6-3|WDR91 5.279099146525065 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12355 66.22 4.0 11620000.0 25 0 1380700.0 + 3673 DAENAMRYI 9 66 541.7504174655621 1081.4862819979242 2 541.7507812380791 MULTI CID FTMS 0 0 0 12354 13564975.0 0.91810371200201 1 -0.1191329956054687 1 Unmodified _DAENAMRYI_ ENSG00000114503|ENST00000321256|NCBP2;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;ENST00000479647.1_1_3:196664263-196668636:-|nuORF;nc|ENSG00000114503|P52298-2|NCBP2 88.95385435242217 0.0153473310052057 4 {[DA]|[EG]}ENAMRY{I|L} 9 0 + 98.026 0.0 0.0 9.064 9.064 93.399 0.0 0.0 0.0 81.57190309977331 11.382805414149786 11.382805414149786 9.208187539523747 0 1.7302046884880935 2.0 0.3807196863200844 1.2302046884880935 + + {[DA]|[EG]}ENAMRY{I|L};{[DA]|[EG]}EGGAMRY{I|L};{[DA]|[EG]}ENAM{I|L}[YR];{[DA]|[EG]}EGGAM{I|L}[YR];WENAM[VG]Y{I|L};{[DA]|[EG]}E[C(Carbamidomethyl (C))R][VG]Y{I|L};WEGGAM[VG]Y{I|L};WEN{I|L}[MN]Y{I|L};{[DA]|[EG]}EN{I|L}{[DS]|[MA]|[CV]|TT}[YR];{[DA]|[EG]}[WQ]M[VG]Y{I|L} 9.064;8.2125;7.7725;6.9211;6.8219;5.4083;5.2257;5.2246;4.926;4.594 +;-;-;-;-;-;-;-;-;- + 209 + 1 1.293 42107.4 1.0 7593 4760 12354 HBL1_DMSO_200M_050219_2,12355 HBL1_DMSO_200M_050219_2,12355,DAENAMRYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12356 66.222 7.6 6188900.0 25 0 1586400.0 + 42978 VVTPLPAA 8 51 384.23574894491776 766.4569449566355 2 384.2354003787041 MULTI CID FTMS 0 0 0 12354 8202667.0 1.0 0 0.0 2 Unmodified _VVTPLPAA_ REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF 0.0 0.8243325171867699 4 P 1 -1 1.5938 0.0 0.0 0.20794 0.0 0.0 568.3389772826106 98.0378435724242 666.3768208550348 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.20794 + + 1 + 1 1.293 44491.4 1.0 7594 4760 12354 HBL1_DMSO_200M_050219_2,12356 HBL1_DMSO_200M_050219_2,12356,VVTPLPAA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12357 66.223 11.0 6276300.0 25 0 817230.0 + 42891 VVPAALKVV 9 66 448.3025672080103 894.5905814828205 2 448.3025390505791 MULTI CID FTMS 0 0 0 12354 5094764.5 0.8032976142377091 1 -0.1191329956054687 3 Unmodified _VVPAALKVV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 34.10243960390752 0.1078313939113124 4 VVPAA{I|L}KVV 9 0 + 45.534 0.0 0.0 5.09 5.09 86.924 0.0 0.0 0.0 6.149021710101657 8.416375079047498 6.149021710101657 45.53449691922972 0 0.3807196863200844 2.0 0.0 0.0 + + VVPAA{I|L}KVV 5.09 + + 143 + 1 1.293 61325.4 1.0 7595 4760 12354 HBL1_DMSO_200M_050219_2,12357 HBL1_DMSO_200M_050219_2,12357,VVPAALKVV True True VVPAALKVV 66.222842 448.302539050579 135506412.0 12354.0 ENST00000468655.1_1_19:49994004-49994437:+|nuORF;;nc|ENSG00000293056|Q6NVV1|RPL13AP3;;ENSG00000142541|ENST00000391857|RPL13A 6.312460422515869 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12358 66.224 8.3 5466400.0 25 0 314240.0 + 24767 MPHLSMQQV 9 78 535.760819024161 1069.507085115122 2 535.7615844607353 MULTI CID FTMS 0 0 0 12354 5135744.0 0.8838822677598026 1 -0.1191329956054687 4 Unmodified _MPHLSMQQV_ ENSG00000142207|ENST00000382751|URB1 46.020951573049366 0.0490941689151868 4 [AG]V[HN]SMQQV 10 4 + 62.102 0.0 0.0 5.8066 5.8066 79.741 0.0 0.0 0.0 4.771212547196626 16.53212513775344 4.771212547196626 4.771212547196626 0 0.3252574989159953 1.6989700043360187 0.8494850021680094 0.0 [AG]V[HN]SMQQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{I|L}SMQQV;[AG]V[HN]SQMQV;[AG]V[HN]SM[AG]QV;[AG]V[HN]SMQ[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}[HN]SMQQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{I|L}SQMQV;[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}SMQQV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{I|L}SMQ[AG]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{I|L}SM[AG]QV 5.8066;5.3605;5.1119;4.9497;4.9497;4.7332;4.6658;4.5685;4.4995;4.4995 -;-;-;-;-;-;-;-;-;- 395 1 1.293 42173.6 1.0 7596 4760 12354 HBL1_DMSO_200M_050219_2,12358 HBL1_DMSO_200M_050219_2,12358,MPHLSMQQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12359 66.225 16.0 3415800.0 25 0 414210.0 + 34691 SPSVHPIASL 10 82 504.27999202486376 1006.5454311165277 2 504.2798034548759 MULTI CID FTMS 0 0 0 12354 3190555.75 0.1638613466029345 -9 0.824981689453125 5 Unmodified _SPSVHPIASL_ REV__ENST00000481918.1_1_1:213186664-213188729:-|nuORF 30.63653989081413 0.2803493085145199 4 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 -1 + 68.835 0.0 0.0 6.8387 6.8387 87.534 0.0 0.0 0.0 8.846065812979305 16.478174818886373 8.846065812979305 8.846065812979305 0 0.9247425010840048 1.5228787452803376 0.8494850021680094 0.0 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 6.8387;5.9599 -;- 83 1 1.293 47384.7 1.0 7597 4760 12354 HBL1_DMSO_200M_050219_2,12359 HBL1_DMSO_200M_050219_2,12359,SPSVHPIASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12360 66.226 31.0 1880700.0 25 0 101660.0 -1 0 64 902.9185289249884 1803.8225049167768 2 902.9195434451104 MULTI CID FTMS 0 0 0 12354 1866970.75 1.0 0 0.0 6 4 [MN]PN{I|L}NEE[RH][Y{M(Oxidation (M))|F}]{I|L}Q 14 -1 + 91.525 0.0 0.0 5.0739 5.0739 79.785 0.0 0.0 0.0 64.75903843015388 4.523296700734008 4.523296700734008 7.825834421237516 0 0.7302046884880937 2.0 0.0 1.885151878060192 [MN]PN{I|L}NEE[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]NP{I|L}NEE[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]PN{I|L}NEE[RH][HD][W{I|L}];{[{M(Oxidation (M))|F}D]|MM}PP{I|L}NEEQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;[NP]{I|L}NM[RH]EEN{I|L}PP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]NP{I|L}NEE[RH][HD][W{I|L}];[NP]{I|L}NM[RH]EEGG{I|L}PP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}GGM[RH]EEN{I|L}PP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NM[RH]EEN[Y{M(Oxidation (M))|F}][K{I|L}];[NP]{I|L}NM[RH]EE[RH]Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.0739;4.6401;3.8209;3.7085;3.6636;3.3871;3.1629;3.1629;3.1318;2.9893 -;-;-;-;-;-;-;-;-;- 492 + 1 1.293 45150.2 1.0 7598 4760 12354 HBL1_DMSO_200M_050219_2,12360 HBL1_DMSO_200M_050219_2,12360, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12361 66.228 24.0 3074400.0 25 0 391650.0 + 21950 LPPLHVAKL 9 89 329.8834230310936 986.6284396934808 3 329.8830444216728 MULTI CID FTMS 0 0 0 12354 1745242.125 1.0 0 0.0 7 Unmodified _LPPLHVAKL_ ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 46.020951573049366 0.0490941689151868 4 {I|L}PP{I|L}HVAK{I|L} 9 0 + 68.568 0.0 0.0 6.9497 6.9497 79.004 0.0 0.0 0.0 49.438200260161125 12.587418566968154 12.587418566968154 1.7731749024395782 0 0.5994850021680094 1.6989700043360187 0.0 0.0 + + {I|L}PP{I|L}HVAK{I|L};{I|L}P{I|L}PHVAK{I|L};{I|L}[KT][WK]AK{I|L} 6.9497;6.77;2.1897 +;-;- + 274 + 1 1.293 64118.7 1.0 7599 4760 12354 HBL1_DMSO_200M_050219_2,12361 HBL1_DMSO_200M_050219_2,12361,LPPLHVAKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12362 66.229 28.0 1825500.0 25 0 195160.0 + 12564 GVIDGHIYAV 10 86 522.280974608767 1042.547396284334 2 522.2802612185478 MULTI CID FTMS 0 0 0 12354 1561957.0 1.0 0 0.0 8 Unmodified _GVIDGHIYAV_ ENSG00000079999|ENST00000171111|KEAP1 30.63653989081413 0.2803493085145199 4 [VG]{M(Oxidation (M))|F}[MT]YRAV 9 6 + 38.992 0.0 0.0 3.7401 3.7401 68.263 0.0 0.0 0.0 2.8605279371726056 2.8605279371726056 2.8605279371726056 2.8605279371726056 0 1.3182503180159344 2.0 0.0 0.0 [VG]{M(Oxidation (M))|F}[MT]YRAV;{[HG]|PP}D{I|L}{I|L}YR{[VA]|[{I|L}G]};{[HG]|PP}{I|L}D{I|L}YR{[VA]|[{I|L}G]};{[HG]|PP}D{I|L}{I|L}RY{[VA]|[{I|L}G]};[VG][HT]{I|L}Y{[TV]|[{I|L}S]}[PG];{[HG]|PP}D{I|L}Y{I|L}R{[VA]|[{I|L}G]};[VG]{I|L}[HT]{[SA]|[TG]}PYV;[VG]{M(Oxidation (M))|F}[MT]RAYV;{[HG]|PP}D{I|L}{I|L}Y[VG]{[VA]|[{I|L}G]};{[HG]|PP}D{I|L}{I|L}VVH[PG] 3.7401;3.4657;3.0081;2.7953;2.775;2.7696;2.7632;2.7074;2.5825;2.5825 -;-;-;-;-;-;-;-;-;- 658 + 1 1.293 46791.5 1.0 7600 4760 12354 HBL1_DMSO_200M_050219_2,12362 HBL1_DMSO_200M_050219_2,12362,GVIDGHIYAV False True GVIDGHIYAV 66.22875 522.280261218548 12942332.0 12354.0 ENSG00000079999|ENST00000171111|KEAP1 5.28919792175293 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12363 66.23 58.0 1275700.0 25 0 147450.0 + 9009 FAYTVKYV 8 104 495.7694167246281 989.5242805160564 2 495.7689086794853 MULTI CID FTMS 0 0 0 12354 453581.84375 0.3538762054658937 -1 0.0717086791992187 9 Unmodified _FAYTVKYV_ ENSG00000160087|ENST00000349431|UBE2J2;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2 28.486842064014134 0.4448922141344407 4 {[MS]|[{M(Oxidation (M))|F}A]}YTVKYV 8 0 + 23.81 0.0 0.0 2.4062 2.4062 70.303 0.0 0.0 0.0 6.397518261700551 6.129493337580879 6.129493337580879 6.129493337580879 0 0.4247425010840047 0.0 0.0 0.0 + + {[MS]|[{M(Oxidation (M))|F}A]}YTVKYV;{[MS]|[{M(Oxidation (M))|F}A]}[CS]KPKP{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[Y{I|L}]PKP{I|L} 2.4062;1.7868;1.7597 +;-;- + 203 + 1 1.293 61623.1 1.0 7601 4760 12354 HBL1_DMSO_200M_050219_2,12363 HBL1_DMSO_200M_050219_2,12363,FAYTVKYV False True FAYTVKYV 66.230198 495.768908679485 9130793.0 12354.0 nc|ENSG00000160087|Q8N2K1-2|UBE2J2;;ENSG00000160087|ENST00000349431|UBE2J2;;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;;nc|ENSG00000160087|Q8N2K1-3|UBE2J2 3.116604745388031 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12364 66.232 94.0 714050.0 25 0 75309.0 + 30009 QTISALIKA 9 102 472.79099834728805 943.567443761376 2 472.7925292849541 MULTI CID FTMS 0 0 0 12354 385217.40625 0.6096446244606676 2 -0.2381362915039062 10 Unmodified _QTISALIKA_ ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF 26.268140514670165 0.1969607489560049 4 [QT]{I|L}SA{I|L}{I|L}[KA] 9 0 + 39.025 0.0 0.0 4.136 4.136 80.831 0.0 0.0 0.0 10.336455609270637 10.6424927368726 10.336455609270637 14.286662482156345 0 0.25 0.9208187539523752 0.0 0.3494850021680094 + + [QT]{I|L}SA{I|L}{I|L}[KA];[QT]{I|L}SA{I|L}[KA]{I|L};[QT]{I|L}S[RK]V{I|L};[QT]{I|L}S[RK]{I|L}V 4.136;2.6218;1.3587;1.256 +;-;-;- + 555 + 1 1.293 58488.4 1.0 7602 4760 12354 HBL1_DMSO_200M_050219_2,12364 HBL1_DMSO_200M_050219_2,12364,QTISALIKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12365 66.237 260.0 591290.0 25 0 34458.0 + 4417 DAVRVLREI 9 148 357.54894947841865 1069.625019035456 3 357.5485412478447 MULTI CID FTMS 0 0 0 12354 356389.40625 0.3144745134831426 2 -0.2381362915039062 11 Unmodified _DAVRVLREI_ ENSG00000107404|ENST00000378888|DVL1;ENSG00000161202|ENST00000313143|DVL3;ENST00000478247.1_1_3:183882805-183888540:+|nuORF;ENST00000478639.1_1_3:183883993-183884404:+|nuORF;nc|ENSG00000107404|O14640-2|DVL1;nc|ENSG00000161202|Q92997-2|DVL3 32.037481411007896 0.1235546156350648 4 DAVRV{I|L}{[RE]|[WV]}{I|L} 9 0 + 69.088 0.0 0.0 6.4591 6.4591 90.689 0.0 0.0 0.0 39.53182782850124 1.163385648463816 1.163385648463816 17.47425010840047 0 0.805462187404089 2.0 0.0 0.3494850021680094 + + DAVRV{I|L}{[RE]|[WV]}{I|L};DA{I|L}V[RV]{[RE]|[WV]}{I|L};DAV{I|L}[RV]{[RE]|[WV]}{I|L};[VG]ERV{I|L}{[RE]|[WV]}{I|L};D{I|L}GRV{I|L}{[RE]|[WV]}{I|L};WVRV{I|L}{[VA]|[{I|L}G]}D{I|L};W{I|L}AAV{I|L}{[RE]|[WV]}{I|L};WV[VG]V{I|L}{[RE]|[WV]}{I|L};W{I|L}VAA{I|L}{[RE]|[WV]}{I|L};WV{I|L}AA{I|L}{[RE]|[WV]}{I|L} 6.4591;4.8254;4.7061;4.2481;3.7461;3.6752;3.5185;3.3991;3.3819;3.2626 +;-;-;-;-;-;-;-;-;- + 417 + 1 1.293 128202.1 1.0 7603 4760 12354 HBL1_DMSO_200M_050219_2,12365 HBL1_DMSO_200M_050219_2,12365,DAVRVLREI True True DAVRVLREI 66.237071 357.548541247845 15796608.0 12354.0 ENSG00000161202|ENST00000313143|DVL3;;nc|ENSG00000107404|O14640-2|DVL1;;ENSG00000107404|ENST00000378888|DVL1;;nc|ENSG00000161202|Q92997-2|DVL3;;ENST00000478639.1_1_3:183883993-183884404:+|nuORF;;ENST00000478247.1_1_3:183882805-183888540:+|nuORF 2.5246461232503257 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12366 66.247 550.0 355990.0 25 0 32572.0 + 9980 FPHHLQEYI 9 168 592.2987709769544 1182.5829890207087 2 592.2987548708916 MULTI CID FTMS 0 0 0 12354 352258.90625 0.6943113916483079 1 -0.1191329956054687 12 Unmodified _FPHHLQEYI_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 64.23631603340823 0.0237365939569086 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH{I|L}QEY{I|L} 9 0 + 71.142 0.0 0.0 6.0158 6.0158 87.813 0.0 0.0 0.0 15.387955392469692 14.973024840566469 14.973024840566469 12.460762528683702 0 1.2302046884880935 1.2218487496163564 1.1307196863200843 0.3252574989159953 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH{I|L}QEY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH{I|L}[AG]EY{I|L};[H{I|L}]QEHP{M(Oxidation (M))|F}Y{I|L};HH{I|L}QEP{M(Oxidation (M))|F}Y{I|L};[H{I|L}]QHEP{M(Oxidation (M))|F}Y{I|L};HH{I|L}M{I|L}QEY{I|L};[H{I|L}]MH{I|L}QEY{I|L};[H{I|L}]HQEP{M(Oxidation (M))|F}Y{I|L};[H{I|L}]HM{I|L}QEY{I|L};HH{I|L}QPE{M(Oxidation (M))|F}Y{I|L} 6.0158;4.9621;4.7146;4.7042;4.6089;4.5553;4.5166;4.478;4.329;4.0462 +;-;-;-;-;-;-;-;-;- + 4137 1 1.293 140503.8 1.0 7604 4760 12354 HBL1_DMSO_200M_050219_2,12366 HBL1_DMSO_200M_050219_2,12366,FPHHLQEYI True True FPHHLQEYI 66.246742 592.298754870892 7902501.5 12354.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 4.631876627604167 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12367 66.259 684.0 369010.0 25 0 25267.0 + 21898 ALANQIPTV 9 201 462.7617359979682 923.5089190627364 2 463.7687560915947 MULTI CID FTMS 0 0 0 12354 292022.53125 0.8131797530731412 -2 0.1913223266601562 13 Unmodified _LPPFPGPSL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 32.116972079565 0.1225432171549407 4 [{I|L}A]ANGA{I|L} 7 6 49.455 0.0 0.0 5.3551 0.0 0.0 0.0 310.1431300061932 310.1431300061932 21.505398174961687 0.0 0.0 0.0 0 0.0 2.0 0.0 1.0994850021680094 [{I|L}A]ANGA{I|L} 5.3551 - 1304 1 1.293 188059.4 1.0 7605 4760 12354 HBL1_DMSO_200M_050219_2,12367 HBL1_DMSO_200M_050219_2,12367,LPPFPGPSL True False ALANQIPTV 66.258632 463.768756091595 4454405.0 12354.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 6.205535411834717 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12368 66.261 104.0 597130.0 25 0 74403.0 + 10387 FSSPHLVQV 9 104 507.2753356380276 1012.5361183428552 2 507.2745544314384 MULTI CID FTMS 0 0 0 12354 260191.765625 0.2629369589448638 -3 0.2916107177734375 14 Unmodified _FSSPHLVQV_ ENSG00000136877|ENST00000373247|FPGS;ENST00000488307.5_1_9:130565203-130570042:+|nuORF;nc|ENSG00000136877|Q05932-2|FPGS;nc|ENSG00000136877|Q05932-3|FPGS;nc|ENSG00000136877|Q05932-4|FPGS 32.30548876998284 0.1201446275138228 4 [H{I|L}]PSS{M(Oxidation (M))|F}VQV 9 6 + 33.519 0.0 0.0 3.3104 3.3104 67.286 0.0 0.0 0.0 3.65279269351241 18.57051957808561 3.65279269351241 3.010299956639809 0 0.4645069810232298 0.0 0.0 0.0 [H{I|L}]PSS{M(Oxidation (M))|F}VQV;[H{I|L}]PSSV{M(Oxidation (M))|F}QV;[H{I|L}]PSVS{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}[RH]{M(Oxidation (M))|F}VQV;{NN|[MP]|[D{I|L}]|[EV]}[RH]V{M(Oxidation (M))|F}QV;[H{I|L}]PSSVQ[{M(Oxidation (M))|F}V];[H{I|L}]PSVSQ[{M(Oxidation (M))|F}V];[H{I|L}]P{M(Oxidation (M))|F}{[CA]|SS}VQV;[H{I|L}][RD]{M(Oxidation (M))|F}VQV;[H{I|L}]PSVQS[{M(Oxidation (M))|F}V] 3.3104;3.0131;2.6201;2.4804;2.1831;2.0831;1.6901;1.5158;1.4134;1.3928 -;-;-;-;-;-;-;-;-;- 591 1 1.293 54103.6 1.0 7606 4760 12354 HBL1_DMSO_200M_050219_2,12368 HBL1_DMSO_200M_050219_2,12368,FSSPHLVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12369 66.274 746.0 374340.0 25 0 20325.0 + -1 PTVPTVPTV 9 159 910.4224407745764 1818.8303286159528 2 910.9231445193292 MULTI CID FTMS 0 0 0 12354 214121.359375 0.0498493109445106 8 -0.734405517578125 15 ENSG00000126254|ENST00000262633|RBM42;nc|ENSG00000126254|Q9BTD8-2|RBM42;nc|ENSG00000126254|Q9BTD8-3|RBM42;nc|ENSG00000126254|Q9BTD8-4|RBM42 4 [MN]PN{I|L}NADEEPVTP 14 -1 52.464 0.0 0.0 2.8845 0.0 0.0 0.0 294.146187553815 294.146187553815 14.40742692793338 0.0 0.0 0.0 0 0.5269763493273799 1.3010299956639813 1.1989700043360187 0.0 [MN]PN{I|L}NADEEPVTP 2.8845 - 36369 + 1 1.293 182768.8 1.0 7607 4760 12354 HBL1_DMSO_200M_050219_2,12369 HBL1_DMSO_200M_050219_2,12369, False False PTVPTVPTV 66.273805 910.923144519329 11987090.0 12354.0 ENSG00000126254|ENST00000262633|RBM42;;nc|ENSG00000126254|Q9BTD8-2|RBM42;;nc|ENSG00000126254|Q9BTD8-3|RBM42;;nc|ENSG00000126254|Q9BTD8-4|RBM42 4.287564992904663 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12370 66.288 800.0 413340.0 25 0 45345.0 + 21646 LPLGGCRVV 9 258 457.2681623202385 912.5217717072768 2 457.2670471072197 MULTI CID FTMS 0 0 0 12354 197419.125 0.2124640353157644 7 -0.6219635009765625 16 Unmodified _LPLGGCRVV_ ENSG00000198912|ENST00000361605|C1orf174;ENST00000486765.5_1_1:3806526-3811957:-|nuORF 21.74664581756881 0.2544899275067181 4 {I|L}P{I|L}G 4 5 49.795 0.0 0.0 5.4568 0.0 0.0 0.0 529.2571505182249 529.2571505182249 19.09065094967644 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {I|L}P{I|L}G 5.4568 + + 1334 + 1 1.293 244520.5 0.8899999856948853 7608 4760 12354 HBL1_DMSO_200M_050219_2,12370 HBL1_DMSO_200M_050219_2,12370,LPLGGCRVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12371 66.302 733.0 419780.0 25 0 47690.0 + -1 FSCCLYCV 8 208 554.7148710666892 1107.4151892001782 2 554.7153808474541 MULTI CID FTMS 0 0 0 12354 189504.609375 1.0 0 0.0 17 3 Carbamidomethyl (C) _FSC(Carbamidomethyl (C))C(Carbamidomethyl (C))LYC(Carbamidomethyl (C))V_ REV__ENST00000216410.7_1_14:53244662-53244785:-|nuORF 10.183394434864962 0.7604730176254005 4 [VP]{I|L}KV 5 -1 26.911 0.0 0.0 2.4301 0.0 0.0 0.0 568.0240508547282 568.0240508547282 1.7609125905568137 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [VP]{I|L}KV 2.4301 - 844 1 1.293 229216.6 1.0 7609 4760 12354 HBL1_DMSO_200M_050219_2,12371 HBL1_DMSO_200M_050219_2,12371,FSCCLYCV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12372 66.307 328.0 219230.0 25 0 24183.0 40306 VGVVKPIT 8 114 406.76434323591735 811.5141335386347 2 406.7639648318291 MULTI CID FTMS 0 0 0 12354 177753.125 1.0 0 0.0 18 Unmodified _VGVVKPIT_ ENSG00000114554|ENST00000393409|PLXNA1 0.7936320650641473 0.8195151834710337 4 {I|L} 1 7 11.594 0.0 0.0 1.4287 0.0 0.0 680.4191913773051 0.0 680.4191913773051 0.0 0.756338376653245 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4287 + + 40 + 1 1.293 58393.7 1.0 7610 4760 12354 HBL1_DMSO_200M_050219_2,12372 HBL1_DMSO_200M_050219_2,12372,VGVVKPIT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12373 66.321 800.0 242770.0 25 0 37413.0 -1 0 136 597.9643966643597 1790.871360593279 3 598.2992431521416 MULTI CID FTMS 0 0 0 12354 128565.546875 0.9686392236378156 -2 0.1913223266601562 19 4 [{I|L}P]NH{I|L}NS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}H{I|L}Q 15 -1 [{I|L}P]NH{I|L}NS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}H + + 28.94 12.724 0.83073 1.616 1.616 44.381 0.0 0.0 0.0 0.0 6.977437731477423 0.0 0.0 0 0.5 0.0 0.0 0.6861818737241735 [{I|L}P]NH{I|L}NS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}H{I|L}Q 1.616 - 1427 + 1 1.293 145759.4 0.8100000023841858 7611 4760 12354 HBL1_DMSO_200M_050219_2,12373 HBL1_DMSO_200M_050219_2,12373, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12374 66.335 800.0 113200.0 25 0 9108.2 + 45618 YVLDRDDLVEA 11 127 654.3281783696104 1306.6418038060208 2 654.3279907107353 MULTI CID FTMS 0 0 0 12354 118421.078125 0.60028559498136 1 -0.1191329956054687 20 Unmodified _YVLDRDDLVEA_ ENSG00000146834|ENST00000310512|MEPCE;nc|ENSG00000289690|Q7L2J0-2|MEPCE 17.44264345198275 0.6723198055858692 4 [YV]{NN|[MP]|[D{I|L}]|[EV]}Y 5 7 21.751 0.0 0.0 1.6647 0.0 0.0 0.0 650.3248842105708 650.3248842105708 2.6661417062425308 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.2742275032520141 [YV]{NN|[MP]|[D{I|L}]|[EV]}Y 1.6647 - 145 1 1.293 72181.4 0.7799999713897705 7612 4760 12354 HBL1_DMSO_200M_050219_2,12374 HBL1_DMSO_200M_050219_2,12374,YVLDRDDLVEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12376 66.34 36.0 1204600.0 25 0 112000.0 + 41204 VPENMEITV 9 76 516.2557444846881 1030.496936036176 2 516.2563354372978 MULTI CID FTMS 0 0 0 12375 1360431.5 0.241971301879156 3 -0.3040084838867187 1 Unmodified _VPENMEITV_ REV__ENSG00000132646|ENST00000379143|PCNA 18.13498045792455 0.3457906370836843 4 [{M(Oxidation (M))|F}E]DTPQ 6 -1 34.589 0.0 0.0 3.3565 0.0 0.0 0.0 310.1766981207658 310.1766981207658 2.3919159875170948 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.360924374808178 0.3807196863200844 [{M(Oxidation (M))|F}E]DTPQ 3.3565 - 136 1 1.303 44452.5 1.0 7613 4761 12375 HBL1_DMSO_200M_050219_2,12376 HBL1_DMSO_200M_050219_2,12376,VPENMEITV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12377 66.341 73.0 569410.0 25 0 87456.0 + 150 AALNGLYRV 9 78 488.7834544796976 975.5523560261952 2 488.7823364138603 MULTI CID FTMS 0 0 0 12375 480390.03125 0.4036213935540435 2 -0.1643218994140625 2 Unmodified _AALNGLYRV_ ENSG00000161671|ENST00000334976|EMC10;nc|ENSG00000161671|Q5UCC4-2|EMC10 42.09456458481378 0.0639583784996157 4 AA{I|L}NG{I|L}[YR]V 9 0 + 47.857 0.0 0.0 4.9056 4.9056 81.035 0.0 0.0 0.0 35.638269457598284 0.2456819149073652 0.2456819149073652 9.208187539523747 0 0.3252574989159953 1.5228787452803376 0.0 0.8494850021680094 + + AA{I|L}NG{I|L}[YR]V;AA{I|L}GGG{I|L}[YR]V;AA{I|L}V{[QG]|[NA]}[YR]V;AA{I|L}N[H{I|L}][QP]{I|L};AA{I|L}V[HQ][QP]{I|L};AA{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}[YR]V;AA{I|L}N[H{I|L}][VP]AA;AA{I|L}V[YV][QA]AA;AA{I|L}V[HQ][VP]AA 4.9056;3.9617;3.2921;2.9997;2.6912;1.8593;1.7473;1.4911;1.4387 +;-;-;-;-;-;-;-;- + 129 + 1 1.303 39682.4 1.0 7614 4761 12375 HBL1_DMSO_200M_050219_2,12377 HBL1_DMSO_200M_050219_2,12377,AALNGLYRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12378 66.343 16.0 4363200.0 25 0 1124200.0 + 5020 DGVPVIKV 8 62 413.7555469361013 825.4965409390027 2 413.7553283572197 MULTI CID FTMS 0 0 0 12375 4037428.25 1.0 0 0.0 3 Unmodified _DGVPVIKV_ ENSG00000109270|ENST00000499666|LAMTOR3 15.847184025352805 0.6768015514314958 4 [VP]{I|L}K 4 4 29.208 0.0 0.0 3.5383 0.0 0.0 0.0 385.17399390886135 385.17399390886135 -3.4080760174096625 0.0 -3.4080760174096625 0.0 0 0.0 1.3010299956639813 0.0 0.0 + [VP]{I|L}K 3.5383 + + 54 1 1.303 59708.3 1.0 7615 4761 12375 HBL1_DMSO_200M_050219_2,12378 HBL1_DMSO_200M_050219_2,12378,DGVPVIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12379 66.344 63.0 2466200.0 25 0 394210.0 40140 VGLSDVEL 8 107 416.2266827569277 830.4388125806554 2 416.2265807986259 MULTI CID FTMS 0 0 0 12375 1343719.875 0.2052477978804205 -2 0.1908416748046875 4 Unmodified _VGLSDVEL_ ENSG00000170153|ENST00000515673|RNF150;nc|ENSG00000170153|Q9ULK6-2|RNF150;nc|ENSG00000170153|Q9ULK6-4|RNF150 46.92087301778293 0.1537303740847981 4 DD{I|L}KVE{I|L} 7 4 + 55.353 0.0 0.0 6.6655 6.6655 89.952 0.0 0.0 0.0 11.601744650890495 16.320232147054057 11.601744650890495 11.601744650890495 0 1.6989700043360187 1.3979400086720375 0.6549471895720985 0.0 DD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}KDVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}DKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}KVDE{I|L};[K{I|L}]DDVE{I|L};[TA][{I|L}A]DVE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EDVE{I|L};[K{I|L}]DVDE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[VG]SVE{I|L};[K{I|L}]VDDE{I|L} 6.6655;5.2685;5.1264;4.608;4.4523;4.3477;4.0282;3.7919;3.7586;3.7029 -;-;-;-;-;-;-;-;-;- 386 1 1.303 123256.8 1.0 7616 4761 12375 HBL1_DMSO_200M_050219_2,12379 HBL1_DMSO_200M_050219_2,12379,VGLSDVEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12380 66.346 54.0 1121500.0 25 0 180200.0 -1 FYAMYNTLVA 10 74 604.786130686672 1207.557708440144 2 604.7863647341728 MULTI CID FTMS 0 0 0 12375 1013355.0 0.444950271832824 -2 0.1908416748046875 5 Oxidation (M) _FYAM(Oxidation (M))YNTLVA_ ENSG00000154864|ENST00000674853|PIEZO2;nc|ENSG00000154864|Q9H5I5-2|PIEZO2;nc|ENSG00000154864|Q9H5I5-4|PIEZO2;nc|ENSG00000154864|Q9H5I5|PIEZO2 13.90604991867851 0.6142120002215601 4 V{I|L}{I|L}{[VA]|[{I|L}G]} 5 -1 25.713 0.0 0.0 2.1294 0.0 0.0 694.204881736525 0.0 694.204881736525 0.0 15.536049848239344 0.0 0.0 0 0.5 0.0 0.0 0.0 V{I|L}{I|L}{[VA]|[{I|L}G]} 2.1294 - 70 1 1.303 49575.5 1.0 7617 4761 12375 HBL1_DMSO_200M_050219_2,12380 HBL1_DMSO_200M_050219_2,12380,FYAMYNTLVA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12381 66.347 47.0 1194000.0 25 0 110800.0 + 10545 FVEKTVMPY 9 81 557.2880019475808 1112.5614509619616 2 557.2880737185478 MULTI CID FTMS 0 0 0 12375 808450.1875 1.0 0 0.0 6 Unmodified _FVEKTVMPY_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 19.256988751693697 0.3154191944385105 4 {M(Oxidation (M))|F}VDDY 5 6 33.443 0.0 0.0 3.006 0.0 0.0 0.0 470.2719210260376 470.2719210260376 16.67780549770299 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}VDDY 3.006 - 44 + 1 1.303 52033.4 1.0 7618 4761 12375 HBL1_DMSO_200M_050219_2,12381 HBL1_DMSO_200M_050219_2,12381,FVEKTVMPY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12382 66.349 125.0 1192300.0 25 0 237320.0 + 14289 IEKIRGIRY 9 88 574.3507957440447 1146.687038554889 2 574.3509399294853 MULTI CID FTMS 0 0 0 12375 668687.5625 0.3713497080293997 -2 0.1908416748046875 7 Unmodified _IEKIRGIRY_ REV__ENSG00000130816|ENST00000359526|DNMT1;REV__ENST00000586588.5_1_19:10244345-10254710:-|nuORF;REV__nc|ENSG00000130816|P26358-3|DNMT1;REV__nc|ENSG00000130816|P26358|DNMT1 16.942295170755138 0.3780752226737986 4 {I|L}D 2 -1 20.969 0.0 0.0 1.8287 0.0 0.0 0.0 915.5533802803589 915.5533802803589 1.136218907515314 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D 1.8287 - 47 + 1 1.303 118006.5 1.0 7619 4761 12375 HBL1_DMSO_200M_050219_2,12382 HBL1_DMSO_200M_050219_2,12382,IEKIRGIRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12383 66.351 44.0 987670.0 25 0 134910.0 29341 QISRGEFVR 9 80 546.3023696101601 1090.59018628712 2 546.8051025271416 MULTI CID FTMS 0 0 0 12375 635195.875 0.649565855030036 -2 0.1908416748046875 8 Unmodified _QISRGEFVR_ ENSG00000116991|ENST00000674635|SIPA1L2 6.723162845929126 0.6799819581413107 4 [{I|L}T]{[RE]|[WV]}{M(Oxidation (M))|F}GAGK{I|L} 10 7 [{I|L}T]{[RE]|[WV]}{M(Oxidation (M))|F}GA + + 14.922 0.42297 0.05462 1.3682 1.3682 44.297 0.0 0.0 0.0 0.0 3.327731244245344 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 [{I|L}T]{[RE]|[WV]}{M(Oxidation (M))|F}GAGK{I|L} 1.3682 - 100 + 1 1.303 42437.2 1.0 7620 4761 12375 HBL1_DMSO_200M_050219_2,12383 HBL1_DMSO_200M_050219_2,12383,QISRGEFVR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12384 66.353 106.0 736560.0 25 0 52392.0 32434 SADLLQNI 8 115 437.2375900599158 872.4606271866317 2 437.2374755740166 MULTI CID FTMS 0 0 0 12375 446670.4375 0.325240480993844 -2 0.1908416748046875 9 Unmodified _SADLLQNI_ ENSG00000144802|ENST00000326172|NFKBIZ;nc|ENSG00000144802|Q9BYH8-2|NFKBIZ;nc|ENSG00000144802|Q9BYH8-3|NFKBIZ 26.34127834903884 0.4900704351052977 4 [AG]VQ 4 6 14.482 0.0 0.0 1.6599 0.0 0.0 0.0 514.2518008529004 514.2518008529004 -0.9338993071080636 0.0 -0.9338993071080636 0.0 0 0.0 1.3979400086720375 0.0 0.25 [AG]VQ 1.6599 - 174 1 1.303 65836.2 1.0 7621 4761 12375 HBL1_DMSO_200M_050219_2,12384 HBL1_DMSO_200M_050219_2,12384,SADLLQNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12385 66.356 159.0 615180.0 25 0 56343.0 + 4307 DARLFTEKI 9 125 364.8733199418808 1091.5981304258423 3 364.8730346560478 MULTI CID FTMS 0 0 0 12375 378317.90625 0.4465833651438586 -2 0.1908416748046875 10 Unmodified _DARLFTEKI_ ENSG00000128915|ENST00000261520|ICE2 47.7319792270244 0.0453426645642791 4 {[DA]|[EG]}R{I|L}{M(Oxidation (M))|F} 5 4 28.605 0.0 0.0 2.6205 0.0 0.0 0.0 486.2566136624236 486.2566136624236 4.215890180650401 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.2887254899964357 0.0 + {[DA]|[EG]}R{I|L}{M(Oxidation (M))|F} 2.6205 + + 287 1 1.303 83351.8 1.0 7622 4761 12375 HBL1_DMSO_200M_050219_2,12385 HBL1_DMSO_200M_050219_2,12385,DARLFTEKI True True DARLFTEKI 66.356098 364.873034656048 11296564.0 12375.0 ENSG00000128915|ENST00000261520|ICE2 5.350267887115479 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12386 66.366 553.0 611360.0 25 0 26688.0 24523 MIRKEELEI 9 181 580.8209631704727 1159.6273734077454 2 580.8204833865166 MULTI CID FTMS 0 0 0 12375 355133.25 0.7909610921468451 -1 0.1191329956054687 11 Unmodified _MIRKEELEI_ nc|ENSG00000162385|P61326-2|MAGOH 62.57269311338072 0.0246576765497938 4 [R{I|L}]MKE{I|L}EE{I|L} 9 4 + 57.292 0.0 0.0 4.9405 4.9405 67.63 0.0 0.0 0.0 1.096981436199016 16.478174818886373 1.096981436199016 0.1722032235195314 0 0.5752574989159953 0.0 1.1237125054200234 0.25 [R{I|L}]MKE{I|L}EE{I|L};[R{I|L}]MKEE{I|L}E{I|L};[{I|L}T][VS]KE{I|L}EE{I|L};[{I|L}T][VS]KEE{I|L}E{I|L};{I|L}{M(Oxidation (M))|F}E{I|L}EK[VS]PV;{I|L}{M(Oxidation (M))|F}{I|L}EEK[VS]PV;[VS][{I|L}T]KE{I|L}EE{I|L};[VS][{I|L}T]KEE{I|L}E{I|L};{[MG]|[TS]}[{I|L}V]KE{I|L}EE{I|L};{[MG]|[TS]}[{I|L}V]KEE{I|L}E{I|L} 4.9405;4.9257;4.8459;4.8311;4.2592;4.2443;4.033;4.0181;3.9984;3.9836 -;-;-;-;-;-;-;-;-;- 3022 1 1.303 249583.7 1.0 7623 4761 12375 HBL1_DMSO_200M_050219_2,12386 HBL1_DMSO_200M_050219_2,12386,MIRKEELEI True True RLMKELEEI 66.365814 580.820483386517 3165053.25 12375.0 ENSG00000236444|ENST00000635918|UBE2L5;;ENSG00000185651|ENST00000342192|UBE2L3 4.480747063954671 2.0 False 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12387 66.368 75.0 677400.0 25 0 61243.0 + 32450 SAFDNFKEV 9 89 528.7535904283003 1055.4926279234005 2 528.7536498904228 MULTI CID FTMS 0 0 0 12375 330424.46875 0.9885373202981622 -1 0.1191329956054687 12 Unmodified _SAFDNFKEV_ ENSG00000157827|ENST00000288670|FMNL2;ENST00000492942.1_1_2:153435413-153463948:+|nuORF;nc|ENSG00000157827|Q96PY5|FMNL2 19.361941925380144 0.3125782356748823 4 {[SA]|[TG]}{M(Oxidation (M))|F}DN{M(Oxidation (M))|F}VGTV 10 3 + 48.677 0.0 0.0 4.6118 4.6118 67.307 0.0 0.0 0.0 24.25968732272281 0.5799194697768684 0.5799194697768684 0.5799194697768684 0 0.7742275032520141 1.6989700043360187 0.0 0.0 {[SA]|[TG]}{M(Oxidation (M))|F}DN{M(Oxidation (M))|F}VGTV;{[SA]|[TG]}{M(Oxidation (M))|F}DN{M(Oxidation (M))|F}VGS{I|L};{[SA]|[TG]}{M(Oxidation (M))|F}DGG{M(Oxidation (M))|F}VGTV;{[SA]|[TG]}{M(Oxidation (M))|F}DGG{M(Oxidation (M))|F}VGS{I|L};{[SA]|[TG]}{M(Oxidation (M))|F}DN[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{M(Oxidation (M))|F}D[{M(Oxidation (M))|F}V]N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}[DC]{I|L}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{M(Oxidation (M))|F}DGG[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{M(Oxidation (M))|F}D[{M(Oxidation (M))|F}V]GG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[C(Carbamidomethyl (C))S]E{I|L}[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.6118;4.5568;3.7435;3.6885;3.2363;3.1613;2.9777;2.3639;2.2889;2.2418 -;-;-;-;-;-;-;-;-;- 323 + 1 1.303 45497.6 1.0 7624 4761 12375 HBL1_DMSO_200M_050219_2,12387 HBL1_DMSO_200M_050219_2,12387,SAFDNFKEV False True SAFDNFKEV 66.367568 528.753649890423 2923436.25 12375.0 ENST00000492942.1_1_2:153435413-153463948:+|nuORF;;nc|ENSG00000157827|Q96PY5|FMNL2;;ENSG00000157827|ENST00000288670|FMNL2;;FMNL2|p.R299H|1|0.3|ENSG00000157827|chr2:152607358-152607358|G/A|missense_variant 6.874318917592366 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12388 66.37 139.0 762240.0 25 0 34062.0 + 30301 QYQRMLSTL 9 125 570.2978173879135 1138.5810818426269 2 570.2975952029228 MULTI CID FTMS 0 0 0 12375 299466.71875 0.2054101010582539 -2 0.1908416748046875 13 Unmodified _QYQRMLSTL_ ENSG00000163634|ENST00000295899|THOC7;ENST00000487570.1_1_3:63824036-63825384:-|nuORF 84.5221896805406 0.0164210731287474 4 QY[NP]{I|L}[YQ]T{I|L} 9 5 + 49.521 0.0 0.0 4.3494 4.3494 70.45 0.0 0.0 0.0 6.220081504048331 6.220081504048331 6.220081504048331 2.9222075262950824 0 0.9674165578762484 1.5228787452803376 0.2302046884880938 0.2887254899964357 QY[NP]{I|L}[YQ]T{I|L};QY[NP]VS[YR]{I|L};QYQ[VP][YQ]T{I|L};[YQ][KC]R{I|L}DT{I|L};[YQ][KC][PS]{I|L}ST{I|L};{[MG]|[TS]}{I|L}[HV]V[NP]C(Carbamidomethyl (C)){I|L};[{I|L}T]S[HV]V[NP]C(Carbamidomethyl (C)){I|L};[YQ][KC][VG]{I|L}DT{I|L};[YQ][KC]R{I|L}SE{I|L};[{I|L}T][HV]SV[NP]C(Carbamidomethyl (C)){I|L} 4.3494;4.0927;3.9303;3.8031;3.541;3.0838;3.0501;2.9944;2.8827;2.8058 -;-;-;-;-;-;-;-;-;- 1497 + 1 1.303 85680.5 1.0 7625 4761 12375 HBL1_DMSO_200M_050219_2,12388 HBL1_DMSO_200M_050219_2,12388,QYQRMLSTL True True QYQRMLSTL 66.370383 570.297595202923 11474367.0 12375.0 ENSG00000163634|ENST00000295899|THOC7;;THOC7|p.S63L|1|0.29|ENSG00000163634|chr3:63838449-63838449|G/A|missense_variant;;ENST00000487570.1_1_3:63824036-63825384:-|nuORF 7.164568742116292 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12389 66.384 784.0 323620.0 25 0 18707.0 + 42703 VTYYRLEEV 9 241 586.3044310820125 0 586.3033325076103 PEAK CID FTMS 0 0 0 12375 153181.578125 1.0 0 0.0 14 Unmodified _VTYYRLEEV_ ENSG00000103018|ENST00000307892|CYB5B;ENST00000514123.5_1_16:69458586-69482095:+|nuORF 34.221707139014875 0.0901242239663321 4 TY{M(Oxidation (M))|F} 3 7 21.312 0.0 0.0 1.8206 0.0 0.0 99.06965791019896 657.326031044614 756.395688954813 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 TY{M(Oxidation (M))|F} 1.8206 - 2362 + 1 1.303 191329.5 1.0 7626 4761 12375 HBL1_DMSO_200M_050219_2,12389 HBL1_DMSO_200M_050219_2,12389,VTYYRLEEV True True VTYYRLEEV 66.383956 586.30333250761 941108.4375 12375.0 ENSG00000103018|ENST00000307892|CYB5B;;ENST00000514123.5_1_16:69458586-69482095:+|nuORF 4.4040632247924805 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12390 66.392 424.0 346380.0 25 0 49821.0 -1 0 162 406.24347958048514 405.2362031138852 1 406.2442199587822 MULTI CID FTMS 0 0 0 12375 144913.765625 1.0 0 0.0 15 4 {I|L} 1 -1 11.99 0.0 0.0 2.9587 0.0 0.0 274.1412914701336 0.0 274.1412914701336 0.0 1.2763625255165325 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.9587 - 22 + 1 1.303 117049.3 1.0 7627 4761 12375 HBL1_DMSO_200M_050219_2,12390 HBL1_DMSO_200M_050219_2,12390, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12391 66.397 315.0 523060.0 25 0 76073.0 + 3962 DALNRPLNI 9 154 513.2910464478488 1024.5675399624974 2 513.2897827029228 MULTI CID FTMS 0 0 0 12375 132012.046875 0.0914818248438844 3 -0.3040084838867187 16 Unmodified _DALNRPLNI_ ENSG00000105576|ENST00000425528|TNPO2;ENST00000588484.1_1_19:12826020-12830096:-|nuORF;nc|ENSG00000105576|O14787-2|TNPO2 29.081581746732265 0.1611639662936252 4 [{I|L}A]DNV 5 6 41.845 0.0 0.0 4.0841 0.0 0.0 0.0 509.275705205725 509.275705205725 27.865115989973823 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.3054621874040891 [{I|L}A]DNV 4.0841 - 367 + 1 1.303 131219.5 1.0 7628 4761 12375 HBL1_DMSO_200M_050219_2,12391 HBL1_DMSO_200M_050219_2,12391,DALNRPLNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12392 66.411 800.0 104860.0 25 0 24208.0 -1 0 47 1182.1598107794784 0 1182.159106433392 PEAK CID FTMS 0 0 0 12375 118477.234375 0.8140280855005377 -1 0.1191329956054687 17 4 E 1 -1 6.9897 0.0 0.0 0.29588 0.0 0.0 1706.077439998912 524.1617012952823 2230.2391412941943 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.29588 - 9 + 1 1.303 76840.4 0.6899999976158142 7629 4761 12375 HBL1_DMSO_200M_050219_2,12392 HBL1_DMSO_200M_050219_2,12392, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12393 66.426 800.0 153330.0 25 0 84469.0 -1 0 67 1138.485527188712 2274.956501444224 2 1138.989428699017 MULTI CID FTMS 0 0 0 12375 112771.203125 0.3902580680255865 2 -0.1643218994140625 18 4 SYC(Carbamidomethyl (C))[HT] 5 -1 24.978 0.0 0.0 1.098 0.0 0.0 1608.7066367975428 0.0 1608.7066367975428 0.0 4.060508939769747 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 SYC(Carbamidomethyl (C))[HT] 1.098 - 580 + 1 1.303 85929.2 0.7300000190734863 7630 4761 12375 HBL1_DMSO_200M_050219_2,12393 HBL1_DMSO_200M_050219_2,12393, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12394 66.44 800.0 208880.0 25 0 10171.0 + 11910 GLWWTYVCSL 10 156 614.2983370581451 1226.58212118309 2 614.2979003787041 MULTI CID FTMS 0 0 0 12375 100570.15625 0.4440448774050657 -9 0.8119583129882812 19 Unmodified _GLWWTYVCSL_ ENSG00000189280|ENST00000338513|GJB5 42.09456458481378 0.1354489350322421 4 {[QN]|[E{I|L}]|[KN]}AGM{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TS{I|L} 11 6 + 50.934 0.0 0.0 4.1525 4.1525 68.004 0.0 0.0 0.0 2.4054924828259985 13.70561685313934 2.4054924828259985 1.804560644581308 0 0.5 0.6020599913279624 1.3494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}AGM{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TS{I|L};{[QN]|[E{I|L}]|[KN]}QM{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TS{I|L};[{I|L}A]EGM{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TS{I|L};{[CP]|[EA]}{I|L}GM{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TS{I|L};{[VA]|[{I|L}G]}AEM{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TS{I|L};{[VA]|[{I|L}G]}{I|L}[DC]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TS{I|L};{[VA]|[{I|L}G]}{I|L}A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TS{I|L};{[TV]|[{I|L}S]}[WD]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TS{I|L};{[CP]|[EA]}AVM{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TS{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[TA]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TS{I|L} 4.1525;4.0054;3.9564;3.9071;3.702;3.6673;3.6454;3.5138;3.4808;3.4805 -;-;-;-;-;-;-;-;-;- 1584 1 1.303 123913.1 0.8899999856948853 7631 4761 12375 HBL1_DMSO_200M_050219_2,12394 HBL1_DMSO_200M_050219_2,12394,GLWWTYVCSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12395 66.454 800.0 73775.0 25 0 13783.0 -1 0 43 1152.443191873574 3454.307746220922 3 1152.773852527142 MULTI CID FTMS 0 0 0 12375 99269.25 1.0 0 0.0 20 4 E 1 -1 6.9897 0.0 0.0 0.20235 0.0 0.0 2798.082295636741 524.1626680963499 3322.2449637330915 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20235 - 3 + 1 1.303 53506.5 0.6899999976158142 7632 4761 12375 HBL1_DMSO_200M_050219_2,12395 HBL1_DMSO_200M_050219_2,12395, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12397 66.459 48.0 1035100.0 25 0 205710.0 121 AALAALALA 9 72 392.748883825661 783.4832147181221 2 392.7485839724541 MULTI CID FTMS 0 0 0 12396 1008054.6875 0.3534945272687997 2 -0.1850051879882812 1 Unmodified _AALAALALA_ ENSG00000170801|ENST00000307358|HTRA3;ENSG00000267221|ENST00000587304|C17orf113;nc|ENSG00000170801|P83110-2|HTRA3;REV__ENSG00000131507|ENST00000253814|NDFIP1;REV__ENST00000509436.1_1_5:141488539-141511465:+|nuORF;REV__nc|ENSG00000131507|Q9BT67-2|NDFIP1 0.0 0.9146841635160942 4 P 1 9 1.2591 0.0 0.0 0.1607 0.0 0.0 563.3516514630425 120.05085931949452 683.402510782537 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.1607 - 3 + 1 1.327 45884.2 1.0 7633 4762 12396 HBL1_DMSO_200M_050219_2,12397 HBL1_DMSO_200M_050219_2,12397,AALAALALA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12398 66.46 22.0 2432400.0 25 0 213000.0 + 44528 YPDRVPVI 8 78 479.7724680190831 957.5303831049662 2 479.7716552615166 MULTI CID FTMS 0 0 0 12396 1527242.125 0.6916957695944869 -3 0.309844970703125 2 Unmodified _YPDRVPVI_ ENSG00000034713|ENST00000037243|GABARAPL2;ENSG00000139112|ENST00000266458|GABARAPL1;ENSG00000170296|ENST00000302386|GABARAP;nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 31.26834338654808 0.3863233259196171 4 [VP][RD]PVY{I|L} 8 3 + 40.128 0.0 0.0 4.1908 4.1908 49.326 0.0 0.0 0.0 0.1849178312658494 0.1849178312658494 0.1849178312658494 0.0 0 0.3807196863200844 1.0457574905606752 0.0 0.0 [VP][RD]PVY{I|L};[VP][RD]PYV{I|L};YPDRVPV{I|L};[VP][RD]YPV{I|L} 4.1908;4.1908;4.1715;3.9941 -;-;+;- + 132 1 1.327 47756.6 1.0 7634 4762 12396 HBL1_DMSO_200M_050219_2,12398 HBL1_DMSO_200M_050219_2,12398,YPDRVPVI False True YPDRVPVI 66.460164 479.771655261517 144163488.0 12396.0 nc|ENSG00000139112|Q9H0R8-2|GABARAPL1;;ENSG00000170296|ENST00000302386|GABARAP;;ENSG00000139112|ENST00000266458|GABARAPL1;;ENSG00000034713|ENST00000037243|GABARAPL2 4.598471164703369 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12399 66.461 4.7 15551000.0 25 0 1638700.0 + 4509 DAYKIRIRI 9 78 383.2366474054595 1146.6881128165785 3 383.2364990115166 MULTI CID FTMS 0 0 0 12396 8867644.0 0.9488088108801968 -1 0.1190032958984375 3 Unmodified _DAYKIRIRI_ ENSG00000143622|ENST00000368323|RIT1;nc|ENSG00000143622|Q92963-2|RIT1;nc|ENSG00000143622|Q92963-3|RIT1 34.10243960390752 0.1078313939113124 4 DAYK 4 5 59.285 0.0 0.0 5.1701 0.0 0.0 0.0 666.4422089092161 666.4422089092161 30.356668758921828 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.805462187404089 + DAYK 5.1701 + + 48 + 1 1.327 64916.5 1.0 7635 4762 12396 HBL1_DMSO_200M_050219_2,12399 HBL1_DMSO_200M_050219_2,12399,DAYKIRIRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12400 66.463 28.0 2432000.0 25 0 233000.0 40762 VLKKGDLVL 9 95 492.8266549496213 983.6387569660426 2 492.8265563845634 MULTI CID FTMS 0 0 0 12396 1884825.875 1.0 0 0.0 4 Unmodified _VLKKGDLVL_ ENST00000511581.5_1_4:186347513-186350500:+|nuORF 30.63653989081413 0.1413794767160703 4 VQKVEVV{I|L} 8 5 34.34 0.0 0.0 3.4911 0.0 0.0 71.0742436139664 0.0 71.0742436139664 0.0 20.84498282230413 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.3252574989159953 VQKVEVV{I|L} 3.4911 - 320 1 1.327 58452.5 1.0 7636 4762 12396 HBL1_DMSO_200M_050219_2,12400 HBL1_DMSO_200M_050219_2,12400,VLKKGDLVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12401 66.464 27.0 3024600.0 25 0 381040.0 + 36438 SYYKDALRF 9 84 388.2010555258776 1161.581337177833 3 388.2010070681572 MULTI CID FTMS 0 0 0 12396 1852946.125 0.9163503124144412 -1 0.1190032958984375 5 Unmodified _SYYKDALRF_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF;nc|ENSG00000185627|Q9UNM6-2|PSMD13 39.94969957227396 0.0757326808254658 4 {[{M(Oxidation (M))|F}C]|[YS]}YKDA{I|L}[R{M(Oxidation (M))|F}] 9 0 + 49.161 0.0 0.0 4.2322 4.2322 75.121 0.0 0.0 0.0 7.147642715192504 9.494784489444967 7.147642715192504 6.478174818886373 0 0.2742275032520141 0.0 0.0 1.055462187404089 + + {[{M(Oxidation (M))|F}C]|[YS]}YKDA{I|L}[R{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}C]|[YS]}YKW{I|L}[R{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}C]|[YS]}YKDA[{I|L}V]{[CT]|[{M(Oxidation (M))|F}G]};[YK][{I|L}T]DKY[MT];{[{M(Oxidation (M))|F}C]|[YS]}YKW[{I|L}V]{[CT]|[{M(Oxidation (M))|F}G]};{[{M(Oxidation (M))|F}C]|[YS]}YK{M(Oxidation (M))|F}[KA]QQ;{[{M(Oxidation (M))|F}C]|[YS]}Y{M(Oxidation (M))|F}K[KA]QQ 4.2322;3.6745;3.4148;2.8942;2.8525;1.9234;1.5126 +;-;-;-;-;-;- + 149 + 1 1.327 73811.5 1.0 7637 4762 12396 HBL1_DMSO_200M_050219_2,12401 HBL1_DMSO_200M_050219_2,12401,SYYKDALRF True True SYYKDALRF 66.463701 388.201007068157 21451183.5 12396.0 ENST00000527047.5_1_11:237024-247462:+|nuORF;;ENSG00000185627|ENST00000532097|PSMD13;;nc|ENSG00000185627|Q9UNM6-2|PSMD13 7.531405131022136 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12402 66.465 40.0 1249900.0 25 0 190600.0 + 21612 LPKSIYSQI 9 88 524.8054791175971 1047.596405301994 2 524.8059570193291 MULTI CID FTMS 0 0 0 12396 1284980.875 0.2162579190915753 -4 0.4294586181640625 6 Unmodified _LPKSIYSQI_ ENSG00000164934|ENST00000612750|DCAF13 76.82478488871298 0.0184607444814265 4 [{I|L}P]KS{I|L}YSQ{I|L} 9 0 + 69.452 0.0 0.0 6.6297 6.6297 76.569 0.0 0.0 0.0 13.187587626244124 14.09256854528806 13.187587626244124 1.2371250542002343 0 0.9674165578762486 1.5228787452803376 0.6747425010840047 0.0 + + [{I|L}P]KS{I|L}YSQ{I|L};[{I|L}P]KSY{I|L}SQ{I|L};[{I|L}P]KYS{I|L}SQ{I|L};[{I|L}P]KSYS{I|L}Q{I|L};[{I|L}P]KS{I|L}YS[AG]{I|L};[{I|L}P]KSY{I|L}S[AG]{I|L};[{I|L}P]KSYSQ{I|L}{I|L};[KP]{I|L}S{I|L}YSQ{I|L};[KP]{I|L}SY{I|L}SQ{I|L};[{I|L}P]KYSS{I|L}Q{I|L} 6.6297;6.5116;5.8175;5.8066;5.7507;5.6326;5.5722;5.3708;5.2527;5.1125 +;-;-;-;-;-;-;-;-;- + 633 1 1.327 44412.1 1.0 7638 4762 12396 HBL1_DMSO_200M_050219_2,12402 HBL1_DMSO_200M_050219_2,12402,LPKSIYSQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12403 66.466 45.0 1408800.0 25 0 197930.0 + 21930 LPPKVSVF 8 80 443.773538906193 885.532524879186 2 443.7736694216728 MULTI CID FTMS 0 0 0 12396 1245602.375 0.0726891718083731 -14 1.3438186645507812 7 Unmodified _LPPKVSVF_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 23.1484247019978 0.5573009939494978 4 {I|L}P 2 6 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3727772130218 672.3727772130218 15.334237554869503 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 178 + 1 1.327 53956.2 1.0 7639 4762 12396 HBL1_DMSO_200M_050219_2,12403 HBL1_DMSO_200M_050219_2,12403,LPPKVSVF False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12404 66.467 25.0 2389100.0 25 0 252450.0 + 35087 SQVEILQRV 9 81 536.3131780986218 1070.6118032640436 2 536.3121215701103 MULTI CID FTMS 0 0 0 12396 1144751.0 0.7107625719803637 -1 0.1190032958984375 8 Unmodified _SQVEILQRV_ ENSG00000117318|ENST00000374561|ID3 34.221707139014875 0.1071766711162635 4 {[QS]|[NT]}VE{I|L}{I|L}RN{I|L} 9 3 + 73.128 0.0 0.0 6.8305 6.8305 84.221 0.0 0.0 0.0 20.15794267183232 5.276776966940261 5.276776966940261 5.276776966940261 0 0.9247425010840048 1.3010299956639813 0.4247425010840047 0.7059771852360797 {[QS]|[NT]}VE{I|L}{I|L}RN{I|L};{[QS]|[NT]}VE{I|L}{I|L}QRV;{[QS]|[NT]}VE{I|L}{I|L}RQV;{[QS]|[NT]}VE{I|L}{I|L}RGG{I|L};{[QS]|[NT]}VE{I|L}{I|L}[AG]RV;{[QS]|[NT]}VE{I|L}[RN]{I|L}{I|L};{[QS]|[NT]}VE{I|L}{I|L}R[AG]V;{NN|[MP]|[D{I|L}]|[EV]}R[RV]V[WK];{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]{[VA]|[{I|L}G]}V[WK] 6.8305;6.3376;6.2435;5.6666;5.4775;5.3799;5.0796;0.91939;0.21874 -;+;-;-;-;-;-;-;- + 156 + 1 1.327 50569.7 1.0 7640 4762 12396 HBL1_DMSO_200M_050219_2,12404 HBL1_DMSO_200M_050219_2,12404,SQVEILQRV True True SQVEILQRV 66.467291 536.31212157011 10666051.0 12396.0 ENSG00000117318|ENST00000374561|ID3 4.969680150349935 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12405 66.469 46.0 1426800.0 25 0 69662.0 + 43348 WNPRRWWRWCW 11 60 866.4155373743996 1730.8165218155991 2 866.4164306521416 MULTI CID FTMS 0 0 0 12396 1137842.25 0.3940963763304004 -2 0.2381362915039062 9 Unmodified _WNPRRWWRWCW_ ENST00000564348.5_1_19:7982609-7983760:+|nuORF;ENST00000566166.1_1_19:7982552-7983971:+|nuORF 0.0 0.8751479354844584 4 [MN]PN{I|L}NADQ 9 9 81.322 0.0 0.0 4.6985 0.0 0.0 0.0 730.3651217096311 730.3651217096311 47.55494310543419 0.0 0.0 0.0 0 1.174742501084005 1.5228787452803376 0.0 1.274227503252014 [MN]PN{I|L}NADQ 4.6985 - 226 + 1 1.327 49516.9 1.0 7641 4762 12396 HBL1_DMSO_200M_050219_2,12405 HBL1_DMSO_200M_050219_2,12405,WNPRRWWRWCW False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12406 66.47 61.0 1314400.0 25 0 152140.0 + 36439 SYYKDALRF 9 69 581.7984351815115 1161.582317429823 2 581.7986938357353 MULTI CID FTMS 0 0 0 12396 874173.1875 0.902782360504384 -1 0.1190032958984375 10 Unmodified _SYYKDALRF_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF;nc|ENSG00000185627|Q9UNM6-2|PSMD13 41.95555342248728 0.0647214845423414 4 SYYKD{M(Oxidation (M))|F} 6 3 80.706 0.0 0.0 6.948 0.0 0.0 0.0 355.2093294733032 355.2093294733032 63.258884703078735 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.805462187404089 SYYKD{M(Oxidation (M))|F} 6.948 - 134 + 1 1.327 64740.9 1.0 7642 4762 12396 HBL1_DMSO_200M_050219_2,12406 HBL1_DMSO_200M_050219_2,12406,SYYKDALRF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12407 66.472 72.0 1372200.0 25 0 91360.0 + 18531 KYQPRIAVF 9 106 561.3270033384384 1120.6394537436768 2 561.3268310427666 MULTI CID FTMS 0 0 0 12396 825691.25 0.7738847902776471 1 -0.045318603515625 11 Unmodified _KYQPRIAVF_ ENSG00000139372|ENST00000392872|TDG 41.95555342248728 0.0647214845423414 4 KYQ 3 6 41.753 0.0 0.0 3.7258 0.0 0.0 0.0 698.3991476036301 698.3991476036301 11.39075625191822 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.3252574989159953 + KYQ 3.7258 + + 127 + 1 1.327 81959.5 1.0 7643 4762 12396 HBL1_DMSO_200M_050219_2,12407 HBL1_DMSO_200M_050219_2,12407,KYQPRIAVF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12408 66.474 100.0 762230.0 25 0 59296.0 + 22360 LPSPLKQTI 9 114 498.8081792005347 995.6018054678694 2 498.8080932497978 MULTI CID FTMS 0 0 0 12396 589326.0 0.0022243053453258 35 -2.5284423828125 12 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 49.55428908609986 0.0413471690215031 4 {I|L}PSP{I|L}[KQ]T{I|L} 9 0 + 66.727 0.0 0.0 6.7022 6.7022 91.721 0.0 0.0 0.0 24.61426266193144 12.204226944476346 12.204226944476346 18.494850021680094 0 1.2302046884880935 1.5228787452803376 0.7134679910804405 0.0 + + {I|L}PSP{I|L}[KQ]T{I|L};[{I|L}P]KQT{I|L}TPV;[PS]{I|L}KAA{I|L}TPV;[{I|L}P]SKAA{I|L}TPV;[{I|L}P]K[AG]T{I|L}TPV;[{I|L}P]KSAA{I|L}TPV;{I|L}TT{I|L}[KQ]PPV;[{I|L}P]T[KQ]{I|L}TPV;[K{I|L}]PQT{I|L}TPV;[{I|L}T]P[KQ]{I|L}TPV 6.7022;4.8445;4.4289;4.4218;3.9196;3.6173;3.2751;3.0194;2.0094;1.6295 +;-;-;-;-;-;-;-;-;- + 742 + 1 1.327 65093.3 1.0 7644 4762 12396 HBL1_DMSO_200M_050219_2,12408 HBL1_DMSO_200M_050219_2,12408,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12409 66.476 91.0 669610.0 25 0 96955.0 + 33548 SILQKMRVF 9 90 374.5536990689946 1120.6392678071838 3 374.5533019900322 MULTI CID FTMS 0 0 0 12396 477793.875 1.0 0 0.0 13 Unmodified _SILQKMRVF_ REV__ENSG00000141098|ENST00000268797|GFOD2;REV__ENST00000602522.1_1_16:67709060-67709966:-|nuORF;REV__nc|ENSG00000141098|Q3B7J2-2|GFOD2 10.150570793230772 0.5619192000662246 4 QYGV{M(Oxidation (M))|F} 5 -1 18.416 0.0 0.0 1.6434 0.0 0.0 508.3506031720719 0.0 508.3506031720719 0.0 2.9318250140072166 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.3807196863200844 QYGV{M(Oxidation (M))|F} 1.6434 - 52 1 1.327 57256.8 1.0 7645 4762 12396 HBL1_DMSO_200M_050219_2,12409 HBL1_DMSO_200M_050219_2,12409,SILQKMRVF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12410 66.478 89.0 866470.0 25 0 50287.0 + 13845 HVFDHPWETV 10 97 633.7988996022467 1265.583246271293 2 633.7994872927666 MULTI CID FTMS 0 0 0 12396 452543.4375 0.576779049189751 -1 0.1190032958984375 14 Unmodified _HVFDHPWETV_ ENSG00000101166|ENST00000355937|PRELID3B;ENST00000466051.1_1_20:57613469-57617839:-|nuORF;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 81.89019881105858 0.0155187237978306 4 [WP]{[QS]|[NT]}HPWETV 10 4 + 54.301 0.0 0.0 4.2906 4.2906 80.61 0.0 0.0 0.0 10.14445509211555 10.672874778693355 10.14445509211555 11.847779753067549 0 0.968765315847925 1.2218487496163564 0.75 0.0 [WP]{[QS]|[NT]}HPWETV;{[MS]|[{M(Oxidation (M))|F}A]}EWP{[QC]|[C(Carbamidomethyl (C))A]}VSTV;[WP]{[QS]|[NT]}HPWTEV;{NN|[MP]|[D{I|L}]|[EV]}VS{[ES]|[DT]|[{I|L}C]}[C(Carbamidomethyl (C))K]ETV;{NN|[MP]|[D{I|L}]|[EV]}VSC(Carbamidomethyl (C)){[SA]|[TG]}[VS]ETV;[{M(Oxidation (M))|F}V]TWP{[QC]|[C(Carbamidomethyl (C))A]}VSTV;{[MS]|[{M(Oxidation (M))|F}A]}EWP{[QC]|[C(Carbamidomethyl (C))A]}VSS{I|L};[{M(Oxidation (M))|F}V]E{[SA]|[TG]}PH{[QS]|[NT]}HQ;[{M(Oxidation (M))|F}V]T[VS]PH{[QS]|[NT]}HQ;[{M(Oxidation (M))|F}V]T{[DA]|[EG]}PH{[QS]|[NT]}HQ 4.2906;3.3544;3.321;3.1809;3.0801;3.0369;3.0265;2.9959;2.758;2.758 -;-;-;-;-;-;-;-;-;- 659 1 1.327 61223.6 1.0 7646 4762 12396 HBL1_DMSO_200M_050219_2,12410 HBL1_DMSO_200M_050219_2,12410,HVFDHPWETV True True HVFDHPWETV 66.477928 633.799487292767 16802764.0 12396.0 ENST00000466051.1_1_20:57613469-57617839:-|nuORF;;ENSG00000101166|ENST00000355937|PRELID3B;;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 7.565622011820476 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12411 66.48 73.0 968590.0 25 0 62694.0 + 41418 VPLDPMEHV 9 91 518.7595520457154 1035.5045511582307 2 518.7604247927666 MULTI CID FTMS 0 0 0 12396 457886.1875 0.5877096281588019 -2 0.2381362915039062 15 Unmodified _VPLDPMEHV_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 37.97399986684836 0.0865783450051559 4 VP{I|L}DPMEHV 9 0 + 65.281 0.0 0.0 6.3043 6.3043 89.421 0.0 0.0 0.0 42.34935982865359 10.590992953673537 10.590992953673537 13.979400086720377 0 0.7302046884880937 1.2218487496163564 0.0 0.0 + + VP{I|L}DPMEHV;VP{I|L}DPM[HD]{I|L};VP{I|L}[MT][HC]HV 6.3043;4.9543;3.9688 +;-;- + 205 + 1 1.327 61168.5 1.0 7647 4762 12396 HBL1_DMSO_200M_050219_2,12411 HBL1_DMSO_200M_050219_2,12411,VPLDPMEHV True True VPLDPMEHV 66.479649 518.760424792767 5855302.5 12396.0 nc|ENSG00000134644|Q14671|PUM1;;nc|ENSG00000134644|Q14671-4|PUM1;;nc|ENSG00000134644|Q14671-2|PUM1;;ENSG00000134644|ENST00000426105|PUM1 7.079956690470378 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12412 66.483 196.0 752190.0 25 0 160100.0 -1 0 112 343.72608502420684 685.4376171152137 2 343.7258178591728 MULTI CID FTMS 0 0 0 12396 413480.6875 0.7690716234888421 -1 0.1190032958984375 16 4 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}VK 6 -1 + 54.567 0.0 0.0 7.961 7.961 85.064 0.0 0.0 0.0 26.478174818886373 3.679767852945943 3.679767852945943 3.679767852945943 0 0.6307196863200843 2.0 0.0 0.2396518287104437 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}VK;{NN|[MP]|[D{I|L}]|[EV]}V{I|L}KV;[{I|L}V]KVEV;[K{I|L}]VVEV 7.961;7.4241;2.193;0.18447 -;-;-;- 105 + 1 1.327 117279.0 1.0 7648 4762 12396 HBL1_DMSO_200M_050219_2,12412 HBL1_DMSO_200M_050219_2,12412, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12413 66.487 207.0 353930.0 25 0 43600.0 + 7623 KTFEDNLIEA 10 95 589.8003453739838 1177.5861378147674 2 590.2979003787041 MULTI CID FTMS 0 0 0 12396 359643.75 1.0 0 0.0 17 Unmodified _EITFDEILQA_ nc|ENSG00000044459|Q9NXG0|CNTLN;nc|ENSG00000044459|Q9NXG0-3|CNTLN;ENSG00000044459|ENST00000380647|CNTLN 18.1463463914782 0.5430639438673815 4 {[QN]|[E{I|L}]|[KN]}T[YN]N{I|L}{I|L}[QA] 10 3 + 36.884 0.0 0.0 3.1322 3.1322 74.37 0.0 0.0 0.0 5.140143618001218 20.290456128172 5.140143618001218 9.164539485499253 0 0.0 0.0 0.3494850021680094 0.8494850021680094 {[QN]|[E{I|L}]|[KN]}T[YN]N{I|L}{I|L}[QA];{[QN]|[E{I|L}]|[KN]}T[YN]GG{I|L}{I|L}[QA] 3.1322;2.3539 -;- 118 1 1.327 59674.0 1.0 7649 4762 12396 HBL1_DMSO_200M_050219_2,12413 HBL1_DMSO_200M_050219_2,12413,EITFDEILQA False False KTFEDNLIEA 66.487349 590.297900378704 3556317.75 12396.0 nc|ENSG00000044459|Q9NXG0|CNTLN;;nc|ENSG00000044459|Q9NXG0-3|CNTLN;;ENSG00000044459|ENST00000380647|CNTLN 6.620529333750407 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12414 66.491 168.0 288020.0 25 0 20633.0 7374 EGETLHTFY 9 92 548.7500531397501 1095.4855533463 2 549.7480346560478 MULTI CID FTMS 0 0 0 12396 356961.75 0.5890432405305175 1 -0.045318603515625 18 Unmodified _EGETLHTFY_ ENSG00000073060|ENST00000261693|SCARB1;ENST00000535005.5_1_12:125267231-125351555:-|nuORF;nc|ENSG00000073060|Q8WTV0-3|SCARB1;nc|ENSG00000073060|Q8WTV0-4|SCARB1;nc|ENSG00000073060|Q8WTV0-5|SCARB1;nc|ENSG00000073060|Q8WTV0|SCARB1 11.640296217721598 0.521594087909532 4 [PS]ENAYWY 8 7 33.906 0.0 0.0 3.0951 0.0 0.0 0.0 82.06693445377186 82.06693445377186 6.458734641205624 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [PS]ENAYWY 3.0951 - 314 + 1 1.327 44346.6 1.0 7650 4762 12396 HBL1_DMSO_200M_050219_2,12414 HBL1_DMSO_200M_050219_2,12414,EGETLHTFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12415 66.493 105.0 522720.0 25 0 62455.0 + 43677 YATNLAESV 9 99 484.24113188485234 966.4677108365048 2 484.2401611208916 MULTI CID FTMS 0 0 0 12396 332743.09375 0.3908751158920316 1 -0.045318603515625 19 Unmodified _YATNLAESV_ ENSG00000153820|ENST00000392056|SPHKAP;nc|ENSG00000153820|Q2M3C7-2|SPHKAP 13.50788311687929 0.4710407108020397 4 C{I|L} 2 8 16.454 0.0 0.0 1.7025 0.0 0.0 732.3675349105266 0.0 732.3675349105266 0.0 0.7082530717588753 0.0 0.0 0 0.0 0.0 0.0 0.0 C{I|L} 1.7025 - 184 + 1 1.327 47866.1 1.0 7651 4762 12396 HBL1_DMSO_200M_050219_2,12415 HBL1_DMSO_200M_050219_2,12415,YATNLAESV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12416 66.5 369.0 537060.0 25 0 43529.0 + 5497 DLTAISTTI 9 178 467.7582865947516 933.5020202563032 2 467.7576171755791 MULTI CID FTMS 0 0 0 12396 274277.8125 1.0 0 0.0 20 Unmodified _DLTAISTTI_ REV__ENST00000368679.8_1_10:127702160-127702283:-|nuORF 21.74664581756881 0.2544899275067181 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}T{I|L} 5 -1 24.669 0.0 0.0 2.6427 0.0 0.0 0.0 375.1535454850719 375.1535454850719 5.459777244632971 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.5283773187068795 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}T{I|L} 2.6427 - 1036 1 1.327 153142.3 1.0 7652 4762 12396 HBL1_DMSO_200M_050219_2,12416 HBL1_DMSO_200M_050219_2,12416,DLTAISTTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12418 66.504 5.8 8951000.0 25 0 1113800.0 + 32366 RYPTSIASL 9 71 504.27999202486376 1006.5454311165277 2 504.2798644900322 MULTI CID FTMS 0 0 0 12417 9560689.0 0.4910202161463134 -6 0.5750656127929688 1 Unmodified _RYPTSIASL_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 49.55428908609986 0.0413471690215031 4 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 5 + 69.135 0.0 0.0 6.8685 6.8685 84.069 0.0 0.0 0.0 4.948500216800937 13.26606256887672 4.948500216800937 4.948500216800937 0 1.305462187404089 1.3979400086720375 0.9247425010840048 0.0 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L};[YR][TP]S{I|L}AS{I|L} 6.8685;6.3769;4.9094 -;-;+ + 141 1 1.327 46907.2 1.0 7653 4763 12417 HBL1_DMSO_200M_050219_2,12418 HBL1_DMSO_200M_050219_2,12418,RYPTSIASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12419 66.505 34.0 1199300.0 25 0 107740.0 + 3674 DAENAMRYI 9 67 541.7504174655621 1081.4862819979242 2 541.7509033083916 MULTI CID FTMS 0 0 0 12417 1279427.375 0.0865941162607736 4 -0.3385086059570312 2 Unmodified _DAENAMRYI_ ENSG00000114503|ENST00000321256|NCBP2;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;ENST00000479647.1_1_3:196664263-196668636:-|nuORF;nc|ENSG00000114503|P52298-2|NCBP2 69.10491478415734 0.0214449631113747 4 {[DA]|[EG]}ENAMRY{I|L} 9 0 + 93.427 0.0 0.0 8.6387 8.6387 92.865 0.0 0.0 0.0 75.46774379777631 10.590992953673537 10.590992953673537 9.208187539523747 0 1.7302046884880935 2.0 0.3807196863200844 0.8494850021680094 + + {[DA]|[EG]}ENAMRY{I|L};{[DA]|[EG]}EGGAMRY{I|L};{[CP]|[EA]}DNAMRY{I|L} 8.6387;7.7873;1.6205 +;-;- + 94 + 1 1.327 38455.8 1.0 7654 4763 12417 HBL1_DMSO_200M_050219_2,12419 HBL1_DMSO_200M_050219_2,12419,DAENAMRYI True True DAENAMRYI 66.505126 541.750903308392 335523120.0 12417.0 ENST00000479647.1_1_3:196664263-196668636:-|nuORF;;ENSG00000114503|ENST00000321256|NCBP2;;ENST00000468923.5_1_3:196664263-196669374:-|nuORF;;nc|ENSG00000114503|P52298-2|NCBP2 7.276657740275065 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12420 66.506 19.0 3229700.0 25 0 335630.0 + 12996 HALRMLQSI 9 86 534.8029142345206 1067.591275535841 2 534.8032104372978 MULTI CID FTMS 0 0 0 12417 2317505.5 0.5518244033435122 -1 0.045318603515625 3 Unmodified _HALRMLQSI_ ENSG00000185988|ENST00000454744|PLK5;nc|ENSG00000185988|Q496M5-2|PLK5 47.74868867922204 0.0453060283459952 4 [HA]{I|L}{M(Oxidation (M))|F}[RP]QS{I|L} 9 3 + 49.587 0.0 0.0 4.6448 4.6448 51.053 0.0 0.0 0.0 3.568781008931481 17.014224667125717 3.568781008931481 0.0 0 1.548455006504028 1.3979400086720375 0.0 0.0 [HA]{I|L}{M(Oxidation (M))|F}[RP]QS{I|L};[HA]{I|L}{[WT]|[RM]}{I|L}QS{I|L};[HA]{I|L}{[WT]|[RM]}{I|L}[AG]S{I|L};[HA]{I|L}{M(Oxidation (M))|F}[RP][AG]S{I|L};[{M(Oxidation (M))|F}V]Q[KP]{M(Oxidation (M))|F}R{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V][AG][KP]{M(Oxidation (M))|F}R{M(Oxidation (M))|F};[KP]{[QD]|[EN]|[WG]|[KD]|[RS]}[RP]QS{I|L} 4.6448;4.6448;3.7823;3.7823;2.9695;2.1019;0.7833 -;+;-;-;-;-;- + 182 1 1.327 54200.8 1.0 7655 4763 12417 HBL1_DMSO_200M_050219_2,12420 HBL1_DMSO_200M_050219_2,12420,HALRMLQSI True True HALRMLQSI 66.506305 534.803210437298 61899053.0 12417.0 nc|ENSG00000185988|Q496M5-2|PLK5;;ENSG00000185988|ENST00000454744|PLK5 4.812437375386556 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12421 66.507 29.0 1646700.0 25 0 160720.0 42646 VTVNSGLISV 10 83 494.78636089299874 0 494.7871887087822 PEAK CID FTMS 0 0 0 12417 1213130.875 0.6422947701112075 -1 0.045318603515625 4 Unmodified _VTVNSGLISV_ ENSG00000182854|ENST00000332238|OR4F15 26.268140514670165 0.2477853539698685 4 {I|L}{I|L} 2 8 15.969 0.0 0.0 1.617 0.0 0.0 204.108780280335 554.2599581354124 758.3687384157474 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 1.617 + + 74 + 1 1.327 45638.3 1.0 7656 4763 12417 HBL1_DMSO_200M_050219_2,12421 HBL1_DMSO_200M_050219_2,12421,VTVNSGLISV False True KQVSDLISV 66.507484 494.7881 33638332.0 12417.0 ENST00000581230.5_1_17:62496043-62497015:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5 3.809127728144328 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12422 66.509 40.0 1618200.0 25 0 224420.0 -1 CEFYKNLF 8 60 560.7604571200699 1119.5063613069397 2 560.7603637576103 MULTI CID FTMS 0 0 0 12417 1177678.875 1.0 0 0.0 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))EFYKNLF_ ENST00000338785.7_1_21:38885904-38886156:+|nuORF 5.230669730166228 0.792582437072536 4 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 1.2054 0.0 0.0 954.426815263774 0.0 954.426815263774 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2054 + + 26 + 1 1.327 59345.6 1.0 7657 4763 12417 HBL1_DMSO_200M_050219_2,12422 HBL1_DMSO_200M_050219_2,12422,CEFYKNLF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12423 66.511 102.0 537890.0 25 0 32300.0 -1 0 62 902.9185289249884 1803.8225049167768 2 902.918505847454 MULTI CID FTMS 0 0 0 12417 537367.5625 0.2878285921190784 3 -0.2948989868164062 6 4 [MN]PN{I|L}NEER[{I|L}A][C(Carbamidomethyl (C))C]{I|L}Q 15 -1 + 91.072 0.0 0.0 5.0488 5.0488 76.737 0.0 0.0 0.0 58.67599686953518 6.098970783918063 6.098970783918063 4.929155219028942 0 1.1989700043360187 1.5228787452803376 0.0 1.4802046884880935 [MN]PN{I|L}NEER[{I|L}A][C(Carbamidomethyl (C))C]{I|L}Q;[MN]PN{I|L}NEER{[RE]|[WV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}NEE[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]P[HV]QREEN{I|L}D[WH];[MN]P[HV]RQEEN{I|L}D[WH];[MN]P[HV]QREEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]P[HV]QREEGG{I|L}D[WH];[MN]P[HV]RQEEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]P[HV][AG]REEN{I|L}D[WH];[MN]P[HV]Q[VG]EEN{I|L}D[WH] 5.0488;4.7756;4.4425;3.8449;3.7473;3.4408;3.3432;3.3432;3.3432;3.3432 -;-;-;-;-;-;-;-;-;- 1068 + 1 1.327 42105.1 1.0 7658 4763 12417 HBL1_DMSO_200M_050219_2,12423 HBL1_DMSO_200M_050219_2,12423, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12424 66.513 106.0 635840.0 25 0 77612.0 + 15668 IQNLVSASL 9 108 472.7743688104439 943.5341846876878 2 472.7745239138603 MULTI CID FTMS 0 0 0 12417 506826.875 0.7752546202775006 -1 0.045318603515625 7 Unmodified _IQNLVSASL_ ENSG00000110330|ENST00000227758|BIRC2;nc|ENSG00000110330|Q13490-2|BIRC2 34.10243960390752 0.1078313939113124 4 {[TV]|[{I|L}S]}TGN 5 7 34.142 0.0 0.0 3.6185 0.0 0.0 0.0 468.2799176801285 468.2799176801285 6.79745132956333 0.0 0.0 0.0 0 0.3252574989159953 1.3010299956639813 0.9947026752325154 0.0 {[TV]|[{I|L}S]}TGN 3.6185 - 596 1 1.327 57665.0 1.0 7659 4763 12417 HBL1_DMSO_200M_050219_2,12424 HBL1_DMSO_200M_050219_2,12424,IQNLVSASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12425 66.516 118.0 813460.0 25 0 84764.0 + + 27666 LPPLHVAKL 9 109 329.8834230310936 986.6284396934808 3 329.8829833865166 MULTI CID FTMS 0 0 0 12417 461479.03125 0.2644212081747683 3 -0.2948989868164062 8 Unmodified _PLHPLGIKI_ nc|ENSG00000204843|Q14203-3|DCTN1;ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1 38.15118350030904 0.0856056900103839 4 {I|L}P{I|L}PHVAK{I|L} 9 -1 + 66.792 0.0 0.0 6.7697 6.7697 59.655 0.0 0.0 0.0 58.83336221496131 11.47817481888638 11.47817481888638 0.0 0 0.2614393726401688 1.6989700043360187 0.0 0.2396518287104437 {I|L}P{I|L}PHVAK{I|L};{I|L}PP{I|L}HVAK{I|L};{I|L}{I|L}PPHVAK{I|L};{I|L}[KT][WK]AK{I|L} 6.7697;6.7697;4.4777;2.0292 -;-;-;- 204 + 1 1.327 79539.2 1.0 7660 4763 12417 HBL1_DMSO_200M_050219_2,12425 HBL1_DMSO_200M_050219_2,12425,PLHPLGIKI False False LPPLHVAKL 66.515576 329.882983386517 30539942.0 12417.0 nc|ENSG00000204843|Q14203-3|DCTN1;;ENSG00000204843|ENST00000628224|DCTN1;;nc|ENSG00000204843|Q14203-4|DCTN1;;nc|ENSG00000204843|Q14203-2|DCTN1;;nc|ENSG00000204843|Q14203-6|DCTN1;;nc|ENSG00000204843|Q14203-5|DCTN1 4.352985858917236 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12426 66.519 164.0 605980.0 25 0 59390.0 + 42892 VVPAALKVV 9 119 448.3025672080103 894.5905814828205 2 448.3027526736259 MULTI CID FTMS 0 0 0 12417 436825.90625 0.0688748632695093 4 -0.3385086059570312 9 Unmodified _VVPAALKVV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000468655.1_1_19:49994004-49994437:+|nuORF;nc|ENSG00000293056|Q6NVV1|RPL13AP3 34.10243960390752 0.1078313939113124 4 VVPAA{I|L}KVV 9 0 + 43.158 0.0 0.0 4.8243 4.8243 85.734 0.0 0.0 0.0 8.543804089302398 7.668432240108771 7.668432240108771 43.15806675123383 0 0.3807196863200844 2.0 0.0 0.0 + + VVPAA{I|L}KVV 4.8243 + + 286 + 1 1.327 82893.9 1.0 7661 4763 12417 HBL1_DMSO_200M_050219_2,12426 HBL1_DMSO_200M_050219_2,12426,VVPAALKVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12427 66.521 120.0 659760.0 25 0 55791.0 + 3103 AVPDGPLQEV 10 109 512.769184801145 1023.52381666909 2 512.7694579958916 MULTI CID FTMS 0 0 0 12417 343379.1875 0.0942312096272043 -6 0.5750656127929688 10 Unmodified _AVPDGPLQEV_ ENSG00000120800|ENST00000261637|UTP20 36.12702656103203 0.1984647928738587 4 {[VA]|[{I|L}G]}PDPQE 7 3 43.245 0.0 0.0 4.2251 0.0 0.0 0.0 284.1626465853587 284.1626465853587 29.26542228185888 0.0 0.0 0.0 0 0.5 2.0 0.2742275032520141 0.7614393726401688 {[VA]|[{I|L}G]}PDPQE 4.2251 - 456 1 1.327 66440.2 1.0 7662 4763 12417 HBL1_DMSO_200M_050219_2,12427 HBL1_DMSO_200M_050219_2,12427,AVPDGPLQEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12428 66.527 316.0 490470.0 25 0 41230.0 + 21770 LPNAPKALI 9 148 468.79776719473006 935.58098145626 2 468.7975036501884 MULTI CID FTMS 0 0 0 12417 286956.5625 0.2381124141625726 -4 0.35516357421875 11 Unmodified _LPNAPKALI_ ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 64.23631603340823 0.0237365939569086 4 {I|L}PNA 4 5 59.769 0.0 0.0 6.3884 0.0 0.0 0.0 537.3407147193911 537.3407147193911 33.36188426947686 0.0 0.0 0.0 0 1.0356668758921828 1.6989700043360187 0.0 0.3494850021680094 + {I|L}PNA 6.3884 + + 1066 + 1 1.327 120010.5 1.0 7663 4763 12417 HBL1_DMSO_200M_050219_2,12428 HBL1_DMSO_200M_050219_2,12428,LPNAPKALI True True LPNAPKALI 66.527034 468.797503650188 25443194.0 12417.0 nc|ENSG00000079785|Q92499-2|DDX1;;nc|ENSG00000079785|Q92499-3|DDX1;;ENSG00000079785|ENST00000233084|DDX1 5.649811585744222 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12429 66.538 655.0 248650.0 25 0 22427.0 -1 0 124 599.63652548401 1795.8877470522298 3 599.6362792849541 MULTI CID FTMS 0 0 0 12417 257615.09375 0.6210717621622567 -3 0.2834548950195312 12 4 [H{I|L}][{M(Oxidation (M))|F}E]W[RV]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q 14 -1 + 56.639 0.0 0.0 3.1538 3.1538 69.148 0.0 0.0 0.0 4.107768156582345 0.0 0.0 4.107768156582345 0 0.8807196863200843 1.6989700043360187 0.0 0.3252574989159953 [H{I|L}][{M(Oxidation (M))|F}E]W[RV]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[{I|L}P]NH{I|L}[C(Carbamidomethyl (C))K][YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q;[{I|L}P]NH{I|L}[C(Carbamidomethyl (C))Q][YG]G{M(Oxidation (M))|F}{I|L}H{I|L}K;[{I|L}P]NH{I|L}N{[CA]|SS}[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP]{I|L}H{I|L}[C(Carbamidomethyl (C))Q][YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H{I|L}[C(Carbamidomethyl (C))K][YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H{I|L}N{[CA]|SS}[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}[C(Carbamidomethyl (C))K][YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}[C(Carbamidomethyl (C))Q][YG]G{M(Oxidation (M))|F}{I|L}H{I|L}K;[{I|L}P]NH[VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}Q 3.1538;2.9251;2.9251;2.8654;2.8587;2.8587;2.799;2.7892;2.7892;2.7798 -;-;-;-;-;-;-;-;-;- 4138 1 1.327 123072.5 1.0 7664 4763 12417 HBL1_DMSO_200M_050219_2,12429 HBL1_DMSO_200M_050219_2,12429, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12430 66.54 86.0 440820.0 25 0 53845.0 + 9648 FLNSGKVSI 9 83 482.7772340303453 963.5399151274906 2 482.7783386111259 MULTI CID FTMS 0 0 0 12417 258153.609375 0.3463476655064886 5 -0.4509506225585937 13 Unmodified _FLNSGKVSI_ REV__ENSG00000169919|ENST00000304895|GUSB;REV__ENST00000475316.5_1_7:65439511-65446985:-|nuORF;REV__nc|ENSG00000169919|P08236-2|GUSB 18.13498045792455 0.3457906370836843 4 V 1 -1 13.495 0.0 0.0 1.4005 0.0 0.0 846.460483525243 0.0 846.460483525243 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4005 + + 81 + 1 1.327 33547.6 1.0 7665 4763 12417 HBL1_DMSO_200M_050219_2,12430 HBL1_DMSO_200M_050219_2,12430,FLNSGKVSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12431 66.554 777.0 217020.0 25 0 17336.0 -1 YYFISFYMLCA 11 139 739.3273628610011 1476.640172788802 2 739.3271362185478 MULTI CID FTMS 0 0 0 12417 186825.4375 1.0 0 0.0 14 Carbamidomethyl (C) _YYFISFYMLC(Carbamidomethyl (C))A_ ENSG00000081248|ENST00000362061|CACNA1S 10.073929032068715 0.8255972128077141 4 YY{I|L}ED 5 -1 47.747 0.0 0.0 3.2335 0.0 0.0 0.0 790.3345466122811 790.3345466122811 24.63610927786017 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7302046884880937 0.0 YY{I|L}ED 3.2335 - 747 + 1 1.327 118485.7 1.0 7666 4763 12417 HBL1_DMSO_200M_050219_2,12431 HBL1_DMSO_200M_050219_2,12431,YYFISFYMLCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12432 66.568 800.0 202940.0 25 0 16163.0 -1 0 155 917.438814135008 0 917.4417602419852 PEAK CID FTMS 0 0 0 12417 170925.0625 1.0 0 0.0 15 4 N{[CP]|[EA]}E[RP]EN{I|L} 9 -1 25.345 0.0 0.0 1.3828 0.0 0.0 569.2675787510397 208.073053228186 777.3406319792256 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.9604093769761876 N{[CP]|[EA]}E[RP]EN{I|L} 1.3828 - 3462 + 1 1.327 107461.0 0.9900000095367432 7667 4763 12417 HBL1_DMSO_200M_050219_2,12432 HBL1_DMSO_200M_050219_2,12432, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12433 66.583 800.0 171970.0 25 0 18562.0 -1 0 115 714.3455878866208 713.3383114200208 1 714.3475829958916 MULTI CID FTMS 0 0 0 12417 170639.640625 0.7158815980986977 1 -0.1396865844726562 16 4 {[QV]|[N{I|L}]|[RA]|[KV]}SYA{M(Oxidation (M))|F} 6 -1 + 69.703 0.0 0.0 9.7714 9.7714 87.868 0.0 0.0 0.0 12.998550946077174 16.197887582883943 12.998550946077174 4.207939342881971 0 0.5752574989159953 2.0 0.8754223615525999 0.7571810378154737 {[QV]|[N{I|L}]|[RA]|[KV]}SYA{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}SAY{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}ASY{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}N{I|L}A{M(Oxidation (M))|F};[NS]Y{I|L}A{M(Oxidation (M))|F};[KA]DYA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}NYA{M(Oxidation (M))|F};[KA]DAY{M(Oxidation (M))|F};{[TV]|[{I|L}S]}NAY{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}NA{I|L}{M(Oxidation (M))|F} 9.7714;9.1815;8.6399;7.9492;7.4377;7.3731;7.2681;6.7832;6.6782;6.6201 -;-;-;-;-;-;-;-;-;- 747 1 1.327 100746.0 0.9900000095367432 7668 4763 12417 HBL1_DMSO_200M_050219_2,12433 HBL1_DMSO_200M_050219_2,12433, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12434 66.597 800.0 102600.0 25 0 13173.0 + -1 VYTTNIQEL 9 82 1080.121661477751 3237.3431550334544 3 1080.456835925579 MULTI CID FTMS 0 0 0 12417 152934.875 1.0 0 0.0 17 nc|ENSG00000110031|O60711-2|LPXN;ENSG00000110031|ENST00000395074|LPXN;ENST00000529915.1_1_11:58322280-58343350:-|nuORF 4 [Q{I|L}]E[HA]{I|L}QEN 9 -1 29.955 0.0 0.0 0.92529 0.0 0.0 0.0 2171.799062586442 2171.799062586442 23.92409946947668 0.0 0.0 0.0 0 0.0 0.0 1.2312958898387063 1.5044321917401078 [Q{I|L}]E[HA]{I|L}QEN 0.92529 - 1089 1 1.327 66725.1 0.7900000214576721 7669 4763 12417 HBL1_DMSO_200M_050219_2,12434 HBL1_DMSO_200M_050219_2,12434, False False VYTTNIQEL 66.596544 1080.45683592558 246727.5 12417.0 nc|ENSG00000110031|O60711-2|LPXN;;ENSG00000110031|ENST00000395074|LPXN;;ENST00000529915.1_1_11:58322280-58343350:-|nuORF 1.6569784879684448 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12435 66.61 800.0 262690.0 25 0 26891.0 + 26213 NQIEEISGLST 11 205 595.7991842148404 1189.5838154964806 2 595.7994262576103 MULTI CID FTMS 0 0 0 12417 150684.78125 0.7283885653016586 -2 0.1643218994140625 18 Unmodified _NQIEEISGLST_ ENSG00000137821|ENST00000260382|LRRC49;ENST00000560691.5_1_15:71192806-71200991:+|nuORF;ENST00000560980.5_1_15:71185191-71211425:+|nuORF;nc|ENSG00000137821|Q8IUZ0-2|LRRC49;nc|ENSG00000137821|Q8IUZ0-3|LRRC49;nc|ENSG00000137821|Q8IUZ0-4|LRRC49 47.05281240577143 0.1339515440072066 4 {[QN]|[E{I|L}]|[KN]}{I|L}EEVDNG 9 6 69.163 0.0 0.0 5.8141 0.0 0.0 0.0 188.1092420924369 188.1092420924369 44.37606182063769 0.0 0.0 0.0 0 0.3703715150305281 0.6575773191777937 0.8609243748081782 1.3441876774005248 {[QN]|[E{I|L}]|[KN]}{I|L}EEVDNG 5.8141 - 8094 1 1.327 152504.5 0.9900000095367432 7670 4763 12417 HBL1_DMSO_200M_050219_2,12435 HBL1_DMSO_200M_050219_2,12435,NQIEEISGLST False True NQIEEISGLST 66.610376 595.79942625761 1667294.75 12417.0 ENST00000560980.5_1_15:71185191-71211425:+|nuORF;;nc|ENSG00000137821|Q8IUZ0-2|LRRC49;;nc|ENSG00000137821|Q8IUZ0-3|LRRC49;;nc|ENSG00000137821|Q8IUZ0-4|LRRC49;;ENST00000560691.5_1_15:71192806-71200991:+|nuORF;;ENSG00000137821|ENST00000260382|LRRC49 7.300887107849121 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12436 66.625 800.0 226360.0 25 0 9239.0 + 43245 WDRHSRVYWWQ 11 147 809.8848764200262 1617.7551999068523 2 809.8862792849541 MULTI CID FTMS 0 0 0 12417 129005.2734375 0.4327047648616166 -2 0.1643218994140625 19 Unmodified _WDRHSRVYWWQ_ REV__ENSG00000132821|ENST00000373461|VSTM2L;REV__nc|ENSG00000132821|Q96N03-2|VSTM2L 11.494710602746466 0.7960433852372589 4 MPN{I|L}NAD[RH]Y{M(Oxidation (M))|F}{I|L}Q 13 -1 + 137.05 0.0 0.0 8.4716 8.4716 87.204 0.0 0.0 0.0 20.71266861786735 19.314734500151147 19.314734500151147 4.643331241078158 0 3.309894379144197 1.5228787452803376 0.0 2.3486198691406326 MPN{I|L}NAD[RH]Y{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}N[RH]DAY{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NADQ{[QN]|[E{I|L}]|[KN]}[KS]MQ;MPN{I|L}NW[RH]Y{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}N[RH]WY{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NAD[RH]YYPQ;MPN{I|L}NWQ{[QN]|[E{I|L}]|[KN]}[KS]MQ;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}N[RH]DAYYPQ;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}GGADQRDG{M(Oxidation (M))|F}{I|L}Q 8.4716;8.1846;7.9144;7.8257;7.7599;7.389;7.2669;7.1913;7.102;7.0466 -;-;-;-;-;-;-;-;-;- 62642 + 1 1.327 127848.2 0.8600000143051147 7671 4763 12417 HBL1_DMSO_200M_050219_2,12436 HBL1_DMSO_200M_050219_2,12436,WDRHSRVYWWQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12437 66.639 800.0 240700.0 25 0 16096.0 + 27829 PLPYVSNM 8 172 460.7309736248951 919.4473943165902 2 460.7313110232353 MULTI CID FTMS 0 0 0 12417 129107.9453125 0.7798675201542726 2 -0.1956253051757812 20 Unmodified _PLPYVSNM_ REV__ENST00000542820.5_1_12:124458599-124458797:+|nuORF 38.99230528602208 0.2511498934509823 4 [{I|L}P]{M(Oxidation (M))|F}V{I|L}SNM 8 -1 + 37.841 0.0 0.0 4.1156 4.1156 68.518 0.0 0.0 0.0 3.521825181113627 6.237125054200234 3.521825181113627 2.218487496163561 0 0.2742275032520141 1.3979400086720375 0.3494850021680094 0.0 [{I|L}P]{M(Oxidation (M))|F}V{I|L}SNM;[{I|L}P]{M(Oxidation (M))|F}{I|L}VSNM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PV{I|L}SNM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}VSNM;[{I|L}P]PYVSNM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}SNM;{[TV]|[{I|L}S]}QQ{I|L}SNM;{[TV]|[{I|L}S]}[RN]VSNM;[NS]RV{I|L}SNM;[NS]R{I|L}VSNM 4.1156;3.8743;3.7326;3.4913;3.3554;3.1409;3.0585;2.8172;2.0748;1.8335 -;-;-;-;+;-;-;-;-;- + 973 1 1.327 151977.0 0.7200000286102295 7672 4763 12417 HBL1_DMSO_200M_050219_2,12437 HBL1_DMSO_200M_050219_2,12437,PLPYVSNM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12439 66.644 8.4 6109500.0 25 0 750610.0 4701 DDIGLVSL 8 72 416.2266827569277 830.4388125806554 2 416.2265197634697 MULTI CID FTMS 0 0 0 12438 6522765.0 0.9963260775178168 1 -0.055938720703125 1 Unmodified _DDIGLVSL_ ENSG00000100485|ENST00000216373|SOS2;nc|ENSG00000100485|Q07890-2|SOS2 24.67388899826682 0.525179942228231 4 DD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L} 7 3 + 54.001 0.0 0.0 6.5028 6.5028 92.841 0.0 0.0 0.0 32.759621790487685 11.649925746542351 11.649925746542351 54.001378994909146 0 1.1549471895720984 1.6989700043360187 0.4247425010840047 0.0 DD{I|L}K{NN|[MP]|[D{I|L}]|[EV]}{I|L} 6.5028 - 92 + 1 1.332 46816.0 1.0 7673 4764 12438 HBL1_DMSO_200M_050219_2,12439 HBL1_DMSO_200M_050219_2,12439,DDIGLVSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12440 66.645 42.0 1302200.0 25 0 274650.0 + 5021 DGVPVIKV 8 71 413.7555469361013 825.4965409390027 2 413.7553893923759 MULTI CID FTMS 0 0 0 12438 1050878.375 0.2602840991663443 3 -0.198822021484375 2 Unmodified _DGVPVIKV_ ENSG00000109270|ENST00000499666|LAMTOR3 21.74664581756881 0.5868176546531598 4 [VP]{I|L}K 4 4 26.823 0.0 0.0 3.2493 0.0 0.0 0.0 385.1735178279277 385.1735178279277 1.0771841425634676 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + [VP]{I|L}K 3.2493 + + 71 1 1.332 51162.1 1.0 7674 4764 12438 HBL1_DMSO_200M_050219_2,12440 HBL1_DMSO_200M_050219_2,12440,DGVPVIKV False True DGVPVIKV 66.644819 413.755389392376 69373176.0 12438.0 ENSG00000109270|ENST00000499666|LAMTOR3 6.410423755645752 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12441 66.646 14.0 3558200.0 25 0 354060.0 + 5867 DPYEVSYRI 9 69 571.2796981093453 1140.5448432854903 2 571.2798950076103 MULTI CID FTMS 0 0 0 12438 3389162.25 1.0 0 0.0 3 Unmodified _DPYEVSYRI_ ENSG00000133639|ENST00000256015|BTG1;ENSG00000159388|ENST00000290551|BTG2 43.77239144664712 0.0547478964384323 4 [DP]YEV{I|L} 6 3 61.643 0.0 0.0 5.4047 0.0 0.0 0.0 421.1852816217407 421.1852816217407 50.92986265876426 0.0 0.0 0.0 0 1.3494850021680094 1.6989700043360187 0.4247425010840047 0.0 [DP]YEV{I|L} 5.4047 - 141 + 1 1.332 42554.8 1.0 7675 4764 12438 HBL1_DMSO_200M_050219_2,12441 HBL1_DMSO_200M_050219_2,12441,DPYEVSYRI True True DPYEVSYRI 66.645998 571.27989500761 24181442.0 12438.0 ENSG00000159388|ENST00000290551|BTG2;;ENSG00000133639|ENST00000256015|BTG1 4.987334410349528 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12442 66.647 23.0 2402600.0 25 0 411380.0 + 24438 MGYKTIMV 8 89 471.74300470515175 941.4714564771036 2 471.7432128787041 MULTI CID FTMS 0 0 0 12438 2226036.0 0.6760007005877786 -1 0.1396865844726562 4 Unmodified _MGYKTIMV_ ENSG00000084774|ENST00000264705|CAD 46.020951573049366 0.1579632664462935 4 [{M(Oxidation (M))|F}T]M{I|L}[KC]TV 8 6 + 47.229 0.0 0.0 5.0165 5.0165 74.926 0.0 0.0 0.0 0.6694678963061307 13.222192947339195 0.6694678963061307 3.7628749457997657 0 0.5 0.0 1.4604093769761874 0.0 [{M(Oxidation (M))|F}T]M{I|L}[KC]TV;[{M(Oxidation (M))|F}T]{I|L}M[KC]TV;[{M(Oxidation (M))|F}T]{I|L}TKCMV;[{M(Oxidation (M))|F}T]M{I|L}[KC]{I|L}S;M[{M(Oxidation (M))|F}T]{I|L}[KC]TV;[{M(Oxidation (M))|F}T]{I|L}M[KC]{I|L}S;[{M(Oxidation (M))|F}T]{I|L}TK[W{M(Oxidation (M))|F}];M[{M(Oxidation (M))|F}T]{I|L}[KC]{I|L}S;[{M(Oxidation (M))|F}T][YV][WQ]V;[{M(Oxidation (M))|F}T]CK[VP][{M(Oxidation (M))|F}T] 5.0165;4.6168;4.4953;3.6121;3.5742;3.2124;2.9934;2.1698;1.2996;1.0865 -;-;-;-;-;-;-;-;-;- 326 + 1 1.332 48127.1 1.0 7676 4764 12438 HBL1_DMSO_200M_050219_2,12442 HBL1_DMSO_200M_050219_2,12442,MGYKTIMV False True MGYKTIMV 66.647177 471.743212878704 49876188.0 12438.0 ENSG00000084774|ENST00000264705|CAD 6.317034085591634 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12443 66.648 33.0 756210.0 25 0 88374.0 -1 ACCCLWLILG 10 50 604.786130686672 1207.557708440144 2 604.7864257693291 MULTI CID FTMS 0 0 0 12438 1629818.0 0.7156307139531849 1 -0.055938720703125 5 2 Carbamidomethyl (C) _AC(Carbamidomethyl (C))C(Carbamidomethyl (C))CLWLILG_ ENSG00000167910|ENST00000301645|CYP7A1 7.910154910731844 0.6900473968920092 4 V{I|L}{I|L}{[VA]|[{I|L}G]} 5 -1 27.218 0.0 0.0 2.254 0.0 0.0 694.2078724591812 0.0 694.2078724591812 0.0 21.73393743112328 0.0 0.0 0 0.5 0.0 0.0 0.0 V{I|L}{I|L}{[VA]|[{I|L}G]} 2.254 - 13 1 1.332 27054.2 1.0 7677 4764 12438 HBL1_DMSO_200M_050219_2,12443 HBL1_DMSO_200M_050219_2,12443,ACCCLWLILG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12444 66.65 36.0 2708900.0 25 0 324430.0 + 21943 LPPLHLLR 8 82 320.2117583217455 957.6134455654365 3 320.2113220095634 MULTI CID FTMS 0 0 0 12438 1538775.5 0.2031117055609512 -6 0.6144638061523438 6 Unmodified _LPPLHLLR_ REV__ENST00000295522.3_1_3:190039874-190040219:-|nuORF 29.081581746732265 0.4323690340403521 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 -1 + 62.573 0.0 0.0 6.5342 6.5342 79.719 0.0 0.0 0.0 51.60371450864984 5.796896906561031 5.796896906561031 3.0102999566398125 0 0.2134679910804404 1.3979400086720375 0.0 0.2302046884880938 {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 6.5342;6.2199;5.9055;3.9084 -;+;-;- + 87 + 1 1.332 82105.3 1.0 7678 4764 12438 HBL1_DMSO_200M_050219_2,12444 HBL1_DMSO_200M_050219_2,12444,LPPLHLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12445 66.651 39.0 1072800.0 25 0 86459.0 + 4593 DAYTHLETF 9 77 548.7500531397501 1095.4855533463 2 548.7514526247978 MULTI CID FTMS 0 0 0 12438 1065257.25 0.4793521129485837 -2 0.1850051879882812 7 Unmodified _DAYTHLETF_ ENSG00000115267|ENST00000649979|IFIH1 34.10243960390752 0.1078313939113124 4 [HT]{I|L}EYGET{M(Oxidation (M))|F} 9 6 + 48.294 0.0 0.0 4.4084 4.4084 72.11 0.0 0.0 0.0 4.232712163289278 31.30387817565364 4.232712163289278 3.4948500216800937 0 0.8935078169319297 0.0 0.3494850021680094 0.0 [HT]{I|L}EYGET{M(Oxidation (M))|F};[HT]Y{I|L}EGET{M(Oxidation (M))|F};[H{I|L}]TEYGET{M(Oxidation (M))|F};[HT]{I|L}EYWT{M(Oxidation (M))|F};[HT]{I|L}YEGET{M(Oxidation (M))|F};[HT]Y{I|L}WET{M(Oxidation (M))|F};[HT]Y{I|L}EWT{M(Oxidation (M))|F};[H{I|L}]TEYWT{M(Oxidation (M))|F};[H{I|L}]TYEGET{M(Oxidation (M))|F};{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EGET{M(Oxidation (M))|F} 4.4084;4.0894;3.9729;3.8171;3.8146;3.498;3.498;3.3815;3.3791;3.3163 -;-;-;-;-;-;-;-;-;- 356 1 1.332 40424.2 1.0 7679 4764 12438 HBL1_DMSO_200M_050219_2,12445 HBL1_DMSO_200M_050219_2,12445,DAYTHLETF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12446 66.652 58.0 1046600.0 25 0 52397.0 + 29407 QLDVATQV 8 92 437.2375900599158 872.4606271866317 2 437.2376281619072 MULTI CID FTMS 0 0 0 12438 1015500.4375 0.7394307368773628 1 -0.055938720703125 8 Unmodified _QLDVATQV_ REV__ENSG00000177728|ENST00000314256|TMEM94;REV__ENST00000585105.5_1_17:73489877-73495164:+|nuORF;REV__nc|ENSG00000177728|Q12767-2|TMEM94;REV__nc|ENSG00000177728|Q12767-3|TMEM94 24.67388899826682 0.525179942228231 4 [DG]T{I|L} 4 -1 14.205 0.0 0.0 1.6281 0.0 0.0 0.0 483.2569583236036 483.2569583236036 -1.8528751129061671 0.0 -1.8528751129061671 0.0 0 0.0 1.0457574905606752 0.8252574989159953 0.0 [DG]T{I|L} 1.6281 - 102 1 1.332 51615.8 1.0 7680 4764 12438 HBL1_DMSO_200M_050219_2,12446 HBL1_DMSO_200M_050219_2,12446,QLDVATQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12447 66.654 93.0 749600.0 25 0 151530.0 + 36332 SYNDYVREF 9 78 596.7674559281261 1191.520358923052 2 596.7673828005791 MULTI CID FTMS 0 0 0 12438 681817.25 0.2897228846074376 -3 0.3040084838867187 9 Unmodified _SYNDYVREF_ ENSG00000083896|ENST00000344157|YTHDC1;nc|ENSG00000083896|Q96MU7-2|YTHDC1 42.312485326615175 0.0627620958981271 4 {[{M(Oxidation (M))|F}C]|[YS]}NDYVRE{M(Oxidation (M))|F} 9 0 + 55.398 0.0 0.0 4.6493 4.6493 80.041 0.0 0.0 0.0 37.6059905927697 10.986446888048109 10.986446888048109 9.208187539523747 0 1.4489700043360187 0.0 0.0 0.805462187404089 + + {[{M(Oxidation (M))|F}C]|[YS]}NDYVRE{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}GGDYVRE{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}N[YK][HS] 4.6493;3.8765;0.037557 +;-;- + 210 + 1 1.332 60753.0 1.0 7681 4764 12438 HBL1_DMSO_200M_050219_2,12447 HBL1_DMSO_200M_050219_2,12447,SYNDYVREF True True SYNDYVREF 66.654206 596.767382800579 35011328.0 12438.0 ENSG00000083896|ENST00000344157|YTHDC1;;nc|ENSG00000083896|Q96MU7-2|YTHDC1 12.280922571818031 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12448 66.656 95.0 934940.0 25 0 178000.0 + 19074 LDRHIVKVPA 10 71 574.3507957440447 1146.687038554889 2 574.3508178591728 MULTI CID FTMS 0 0 0 12438 665896.25 0.3697995773853984 1 -0.055938720703125 10 Unmodified _LDRHIVKVPA_ REV__ENSG00000091436|ENST00000375213|MAP3K20;REV__ENST00000476618.5_1_2:173940647-174074648:+|nuORF;REV__nc|ENSG00000091436|Q9NYL2-2|MAP3K20;REV__nc|ENSG00000091436|Q9NYL2-3|MAP3K20 6.2057823575117 0.6979311171683138 4 {I|L}D 2 -1 20.969 0.0 0.0 1.8287 0.0 0.0 0.0 915.5540977308028 915.5540977308028 1.136218907515314 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D 1.8287 + + 25 + 1 1.332 73517.2 1.0 7682 4764 12438 HBL1_DMSO_200M_050219_2,12448 HBL1_DMSO_200M_050219_2,12448,LDRHIVKVPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12449 66.659 121.0 1051100.0 25 0 154400.0 + 41851 VPYLFKKV 8 97 331.8761254145025 992.6065468437076 3 331.8757812380791 MULTI CID FTMS 0 0 0 12438 542690.0 0.2770851301927135 -5 0.4948501586914062 11 Unmodified _VPYLFKKV_ ENSG00000100395|ENST00000216237|L3MBTL2;ENST00000466589.5_1_22:41601366-41623356:+|nuORF;ENST00000479978.5_1_22:41615341-41623356:+|nuORF;nc|ENSG00000100395|Q969R5-2|L3MBTL2;nc|ENSG00000100395|Q969R5-3|L3MBTL2 21.74664581756881 0.5868176546531598 4 VPY{I|L}{M(Oxidation (M))|F}KVK 8 2 + 50.765 0.0 0.0 5.1144 5.1144 68.688 0.0 0.0 0.0 25.27034705051495 0.2996322337744317 0.2996322337744317 0.2996322337744317 0 0.0 0.8860566476931632 0.0 0.25 VPY{I|L}{M(Oxidation (M))|F}KVK;VPY{I|L}{M(Oxidation (M))|F}KKV 5.1144;5.0842 -;+ + 292 + 1 1.332 108206.5 1.0 7683 4764 12438 HBL1_DMSO_200M_050219_2,12449 HBL1_DMSO_200M_050219_2,12449,VPYLFKKV False True VPYLFKKV 66.65881 331.875781238079 51783553.0 12438.0 nc|ENSG00000100395|Q969R5-2|L3MBTL2;;nc|ENSG00000100395|Q969R5-3|L3MBTL2;;ENST00000466589.5_1_22:41601366-41623356:+|nuORF;;ENST00000479978.5_1_22:41615341-41623356:+|nuORF;;ENSG00000100395|ENST00000216237|L3MBTL2 5.887130737304688 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12450 66.66 59.0 706480.0 25 0 79634.0 + -1 LTEVCLNEL 9 73 545.7743488765456 1089.534144819891 2 545.7747680544853 MULTI CID FTMS 0 0 0 12438 520508.9375 0.5830927568562458 -12 1.115966796875 12 Carbamidomethyl (C) _LTEVC(Carbamidomethyl (C))LNEL_ REV__LTR12C_dup2064|chr12:31804678-31806355:-|1.2822362663309388|0.2651831238132041|2.27|47.0|28|2|sense 10.823927491677226 0.5436922275383211 4 E{I|L} 2 -1 18.443 0.0 0.0 1.6928 0.0 0.0 829.3966458958661 0.0 829.3966458958661 0.0 4.018637558036673 0.0 0.0 0 0.0 0.0 0.5 0.0 E{I|L} 1.6928 + + 121 + 1 1.332 36609.6 1.0 7684 4764 12438 HBL1_DMSO_200M_050219_2,12450 HBL1_DMSO_200M_050219_2,12450,LTEVCLNEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12451 66.662 98.0 707510.0 25 0 83680.0 + 26623 NVTEYVVRV 9 100 539.7987814600598 1077.5830099869197 2 539.7982665896416 MULTI CID FTMS 0 0 0 12438 483161.28125 1.0 0 0.0 13 Unmodified _NVTEYVVRV_ ENSG00000125651|ENST00000394456|GTF2F1;ENST00000595047.5_1_19:6392384-6393012:-|nuORF 24.99096001346401 0.2132109383330889 4 {[NV]|[RG]}TEYVVRV 9 0 + 44.658 0.0 0.0 4.1443 4.1443 76.042 0.0 0.0 0.0 22.269987279362624 5.652165235758595 5.652165235758595 7.781512503836431 0 0.8494850021680094 0.0 0.0 0.0 + + {[NV]|[RG]}TEYVVRV;{[NV]|[RG]}TEVYVRV 4.1443;3.4222 +;- + 281 + 1 1.332 62370.9 1.0 7685 4764 12438 HBL1_DMSO_200M_050219_2,12451 HBL1_DMSO_200M_050219_2,12451,NVTEYVVRV False True NVTEYVVRV 66.662435 539.798266589642 3714372.75 12438.0 ENSG00000125651|ENST00000394456|GTF2F1;;ENST00000595047.5_1_19:6392384-6393012:-|nuORF 7.003544171651204 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12452 66.664 50.0 724080.0 25 0 81185.0 10388 FSSPHLVQV 9 77 507.2753356380276 1012.5361183428552 2 507.2744018435478 MULTI CID FTMS 0 0 0 12438 422064.59375 0.4265176512882752 1 -0.055938720703125 14 Unmodified _FSSPHLVQV_ ENSG00000136877|ENST00000373247|FPGS;ENST00000488307.5_1_9:130565203-130570042:+|nuORF;nc|ENSG00000136877|Q05932-2|FPGS;nc|ENSG00000136877|Q05932-3|FPGS;nc|ENSG00000136877|Q05932-4|FPGS 23.1484247019978 0.2366544122328345 4 V 1 8 13.099 0.0 0.0 1.2937 0.0 0.0 895.456419711799 0.0 895.456419711799 0.0 -3.812281309285627 -3.812281309285627 0.0 0 0.0 0.0 0.0 0.0 + V 1.2937 + + 63 + 1 1.332 37250.2 1.0 7686 4764 12438 HBL1_DMSO_200M_050219_2,12452 HBL1_DMSO_200M_050219_2,12452,FSSPHLVQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12453 66.665 71.0 1079400.0 25 0 141630.0 + 32506 SALHRIMEI 9 102 357.19867100643614 1068.5741836195084 3 357.1978637576103 MULTI CID FTMS 0 0 0 12438 426320.59375 1.0 0 0.0 15 Unmodified _SALHRIMEI_ ENSG00000152556|ENST00000359794|PFKM;ENST00000546964.5_1_12:48513149-48528944:+|nuORF;nc|ENSG00000152556|P08237-2|PFKM;nc|ENSG00000152556|P08237-3|PFKM 13.042465956692816 0.4836390050082244 4 {[SA]|[TG]}VV[HA]{I|L}ME{I|L} 10 3 {[SA]|[TG]}VV[HA]{I|L}ME + + 14.604 6.8573 0.73146 1.3667 1.3667 44.294 0.0 0.0 0.0 0.0 -7.33410649039925 -7.33410649039925 0.0 0 0.0 0.0 0.0 0.0 {[SA]|[TG]}VV[HA]{I|L}ME{I|L} 1.3667 - 131 + 1 1.332 67415.3 1.0 7687 4764 12438 HBL1_DMSO_200M_050219_2,12453 HBL1_DMSO_200M_050219_2,12453,SALHRIMEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12454 66.669 185.0 609640.0 25 0 98294.0 41248 VPGKVVPL 8 110 404.7684194017362 807.5222858702724 2 404.7680847048759 MULTI CID FTMS 0 0 0 12438 373899.34375 0.063866354209503 -5 0.4948501586914062 16 Unmodified _VPGKVVPL_ ENSG00000135048|ENST00000377044|CEMIP2;nc|ENSG00000135048|Q9UHN6-2|CEMIP2 34.18733598223924 0.3315367612694167 4 [VP]KVGPV{I|L} 8 3 + 67.858 0.0 0.0 8.4033 8.4033 78.82 0.0 0.0 0.0 20.858565581929668 60.86873447409923 20.858565581929668 0.0296090698503235 0 1.3494850021680094 1.5228787452803376 0.0 0.2302046884880938 [VP]KVGPV{I|L};[VP]GVKPV{I|L};[VP]KGVPV{I|L};[VP]GKVPV{I|L};[VP]GVPKV{I|L};[VP]KP[VG]V{I|L};[KP]VVGPV{I|L};[KP]VGVPV{I|L};[PG]VVKPV{I|L};[VP]KP{I|L}AA{I|L} 8.4033;8.3996;8.2534;8.0987;6.9149;5.8202;5.3357;5.1858;4.8275;4.5486 -;-;-;-;-;-;-;-;-;- 483 1 1.332 91912.8 1.0 7688 4764 12438 HBL1_DMSO_200M_050219_2,12454 HBL1_DMSO_200M_050219_2,12454,VPGKVVPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12455 66.671 103.0 541020.0 25 0 96897.0 + 14599 IIDQHTFEV 9 88 551.2825445806468 1100.5505362280935 2 551.2828246951103 MULTI CID FTMS 0 0 0 12438 332853.0 0.7929542416103366 -1 0.1396865844726562 17 Unmodified _IIDQHTFEV_ ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1 23.1484247019978 0.2366544122328345 4 {I|L}{I|L}[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}T 6 6 41.444 0.0 0.0 3.7658 0.0 0.0 0.0 377.12204919986567 377.12204919986567 8.618099177577314 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.305462187404089 0.0 {I|L}{I|L}[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}T 3.7658 - 333 + 1 1.332 46859.8 1.0 7689 4764 12438 HBL1_DMSO_200M_050219_2,12455 HBL1_DMSO_200M_050219_2,12455,IIDQHTFEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12456 66.682 602.0 175120.0 25 0 19670.0 + 34959 SQLDISEPYKV 11 111 639.8324927664632 1277.6504325997264 2 639.8321411013603 MULTI CID FTMS 0 0 0 12438 293529.59375 1.0 0 0.0 18 Unmodified _SQLDISEPYKV_ ENSG00000140968|ENST00000268638|IRF8 68.75988807550267 0.0359983986270074 4 {[QS]|[NT]}{I|L}D{I|L}SEPYKV 11 0 + 80.772 0.0 0.0 6.3219 6.3219 73.621 0.0 0.0 0.0 19.36733431724842 0.2996322337744175 0.2996322337744175 0.2996322337744175 0 1.5 1.2218487496163564 0.805462187404089 0.6050541008457975 + + {[QS]|[NT]}{I|L}D{I|L}SEPYKV;{[QS]|[NT]}{I|L}D{I|L}SEPYVK;{[QS]|[NT]}{I|L}D{I|L}SEV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K;{[QS]|[NT]}{I|L}D{I|L}SEV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};{[QS]|[NT]}{I|L}D{I|L}SY[EP]KV;{[QS]|[NT]}{I|L}D{I|L}SY[EP]VK;{[QS]|[NT]}{I|L}D{I|L}SY{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L};{[QS]|[NT]}{I|L}D{I|L}S[{M(Oxidation (M))|F}V][RD]V;{[QS]|[NT]}{I|L}D{I|L}SY[TA]AP{I|L};{[QS]|[NT]}{I|L}D{I|L}SY[TA]{I|L}[PA] 6.3219;6.2985;5.6902;5.6103;5.2278;5.2043;4.6094;4.5615;4.133;3.9019 +;-;-;-;-;-;-;-;-;- + 662 + 1 1.332 84804.8 1.0 7690 4764 12438 HBL1_DMSO_200M_050219_2,12456 HBL1_DMSO_200M_050219_2,12456,SQLDISEPYKV True True SQLDISEPYKV 66.681737 639.83214110136 1977935.875 12438.0 ENSG00000140968|ENST00000268638|IRF8 7.187316258748372 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12457 66.684 96.0 449300.0 25 0 42656.0 + + -1 RFIPSAYPY 9 68 557.2880019475808 1112.5614509619616 2 557.2888671755791 MULTI CID FTMS 0 0 0 12438 306617.09375 0.3792652886854578 3 -0.198822021484375 19 Oxidation (M) _LPYVAQYM(Oxidation (M))L_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656-2|DDOST 12.531546534597751 0.4974689918368763 4 {[YD]|[{M(Oxidation (M))|F}M]}YRRPP{M(Oxidation (M))|F} 8 -1 + 25.623 0.0 0.0 2.303 2.303 62.954 0.0 0.0 0.0 1.532125137753436 2.430380486862944 1.532125137753436 1.532125137753436 0 0.9247425010840048 0.0 0.0 0.0 {[YD]|[{M(Oxidation (M))|F}M]}YRRPP{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]D[KT]YPP{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}YRRPM{I|L};{[YD]|[{M(Oxidation (M))|F}M]}RRYPP{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]D[KT]YPM{I|L};{[YD]|[{M(Oxidation (M))|F}M]}RRYPM{I|L};[{M(Oxidation (M))|F}V]D[KT]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PY;[{M(Oxidation (M))|F}V]D[KT]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}RR{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PY;{[YD]|[{M(Oxidation (M))|F}M]}RR{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L} 2.303;2.1653;2.0846;2.0325;1.9469;1.814;1.3788;1.1603;0.41474;0.19629 -;-;-;-;-;-;-;-;-;- 109 + 1 1.332 42415.1 1.0 7691 4764 12438 HBL1_DMSO_200M_050219_2,12457 HBL1_DMSO_200M_050219_2,12457,LPYVAQYML False False RFIPSAYPY 66.683829 557.288867175579 8181202.0 12438.0 ENSG00000244038|ENST00000602624|DDOST;;nc|ENSG00000244038|P39656|DDOST;;nc|ENSG00000244038|P39656-3|DDOST;;nc|ENSG00000244038|P39656-2|DDOST 2.2924196124076843 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12458 66.695 650.0 231060.0 25 0 11635.0 -1 0 153 655.6580592539111 1963.9523483619328 3 655.9918701052666 MULTI CID FTMS 0 0 0 12438 256399.890625 1.0 0 0.0 20 4 [YE]E{I|L}[HT]GAQA{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y 15 -1 74.967 0.0 0.0 3.8172 0.0 0.0 0.0 196.07408078123072 196.07408078123072 32.11401446528966 0.0 0.0 0.0 0 1.0994850021680094 1.6989700043360187 0.7134679910804405 0.3807196863200844 [YE]E{I|L}[HT]GAQA{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y 3.8172 - 21391 1 1.332 115482.6 1.0 7692 4764 12438 HBL1_DMSO_200M_050219_2,12458 HBL1_DMSO_200M_050219_2,12458, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12460 66.704 389.0 331220.0 25 0 22439.0 + 4308 DARLFTEKI 9 159 364.8733199418808 1091.5981304258423 3 364.8729736208916 MULTI CID FTMS 0 0 0 12459 183881.296875 0.2170617012539421 2 -0.14288330078125 1 Unmodified _DARLFTEKI_ ENSG00000128915|ENST00000261520|ICE2 20.580933911654288 0.2795815587326093 4 {[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}{M(Oxidation (M))|F}P 6 7 16.118 0.0 0.0 1.4766 0.0 0.0 0.0 389.1942357327361 389.1942357327361 4.876430167995881 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.3252574989159953 0.0 {[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}{M(Oxidation (M))|F}P 1.4766 - 268 1 1.332 105815.3 1.0 7693 4765 12459 HBL1_DMSO_200M_050219_2,12460 HBL1_DMSO_200M_050219_2,12460,DARLFTEKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12461 66.706 69.0 1169900.0 25 0 164520.0 27776 PLPPKFTKL 9 97 520.8266696121673 1039.6387862911345 2 520.8271972537041 MULTI CID FTMS 0 0 0 12459 969372.875 0.861050848522781 -1 0.055938720703125 2 Unmodified _PLPPKFTKL_ ENSG00000173988|ENST00000595396|LRRC63 26.268140514670165 0.1969607489560049 4 [{I|L}A]R[EP]{I|L}TK{I|L} 9 4 + 44.232 0.0 0.0 4.2545 4.2545 74.851 0.0 0.0 0.0 1.1094353295967494 29.53904979171924 1.1094353295967494 6.078805091134214 0 1.0941876774005248 0.7695510786217261 0.3252574989159953 0.0 [{I|L}A]R[EP]{I|L}TK{I|L};{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]TK{I|L};{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]T{I|L}K;[{I|L}A]R[TP]{I|L}EK{I|L};[{I|L}A][W{I|L}][VP]TK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[KQ][VP]TK{I|L};[AG]V[KQ][VP]TK{I|L};[{I|L}A][W{I|L}]{I|L}[PS]K{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]{I|L}[PS]K{I|L};[AG]V[KQ]{I|L}[PS]K{I|L} 4.2545;3.6698;3.4018;2.7436;2.5271;2.0003;1.9241;1.829;1.3022;1.226 -;-;-;-;-;-;-;-;-;- 462 1 1.332 64805.4 1.0 7694 4765 12459 HBL1_DMSO_200M_050219_2,12461 HBL1_DMSO_200M_050219_2,12461,PLPPKFTKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12462 66.708 106.0 809150.0 25 0 129630.0 + + 16819 IPWMGDHKI 9 118 366.1920598794823 1095.554350238647 3 366.1915161013603 MULTI CID FTMS 0 0 0 12459 559053.375 0.773308098323515 -1 0.055938720703125 3 Unmodified _KHDGMWPIL_ nc|ENSG00000061936|Q12872-2|SFSWAP;ENST00000540469.5_1_12:132195753-132196293:+|nuORF;ENSG00000061936|ENST00000261674|SFSWAP;ENST00000535399.1_1_12:132195753-132198841:+|nuORF 12.872603262515298 0.4882369880199512 4 {I|L}PWM[DG]HK{I|L} 9 -1 + 42.874 0.0 0.0 3.9135 3.9135 73.942 0.0 0.0 0.0 19.22926844519944 0.4677437977763077 0.4677437977763077 6.331527198463746 0 0.2396518287104437 1.0457574905606752 0.0 0.0 {I|L}PWM[DG]HK{I|L};{I|L}PWM[DG]{I|L}[HK];{I|L}P{I|L}{[CT]|[{M(Oxidation (M))|F}G]}M[PG][HQ];{I|L}PW[YV][PG][HQ];{I|L}P{[DA]|[EG]}M{[RE]|[WV]}[HK];{I|L}{I|L}P{[CT]|[{M(Oxidation (M))|F}G]}M[PG][HQ] 3.9135;3.3356;3.2384;2.7353;2.1736;1.7904 -;-;-;-;-;- 535 + 1 1.332 77859.7 1.0 7695 4765 12459 HBL1_DMSO_200M_050219_2,12462 HBL1_DMSO_200M_050219_2,12462,KHDGMWPIL False False IPWMGDHKI 66.708191 366.19151610136 4641563.5 12459.0 nc|ENSG00000061936|Q12872-2|SFSWAP;;ENST00000540469.5_1_12:132195753-132196293:+|nuORF;;ENSG00000061936|ENST00000261674|SFSWAP;;ENST00000535399.1_1_12:132195753-132198841:+|nuORF 6.945262908935547 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12463 66.713 230.0 539250.0 25 0 50897.0 + 45097 YPYPYPHTL 9 112 575.7824481621841 1149.550343391168 2 575.7823974490166 MULTI CID FTMS 0 0 0 12459 416205.375 0.123956116170279 -5 0.4790802001953125 4 Unmodified _YPYPYPHTL_ ENSG00000116221|ENST00000360840|MRPL37 153.26226096763125 0.0142306621733519 4 YPYPYPHT{I|L} 9 0 + 115.76 0.0 0.0 10.07 10.07 99.038 0.0 0.0 0.0 79.78556788293787 29.39683951849773 29.39683951849773 46.46701274429496 0 2.4916440611282624 2.0 2.1560383909227108 0.0 + + YPYPYPHT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPH[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PYYPH[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPPYH[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{[QG]|[NA]}H[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PYPYH[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PHT{[QG]|[NA]}H[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HPT{[QG]|[NA]}H[{I|L}T];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}T];{[VA]|[{I|L}G]}[QA]PYPY{[QN]|[E{I|L}]|[KN]} 10.07;6.0278;5.4841;5.1778;5.0537;4.6341;4.51;4.1639;3.9456;3.9437 +;+;-;-;-;-;-;-;-;- + 897 + 1 1.332 98976.0 1.0 7696 4765 12459 HBL1_DMSO_200M_050219_2,12463 HBL1_DMSO_200M_050219_2,12463,YPYPYPHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12464 66.714 61.0 883330.0 25 0 43480.0 45611 YVKDVEANF 9 98 542.7690096726149 1083.5234664120296 2 542.7698242068291 MULTI CID FTMS 0 0 0 12459 330391.46875 1.0 0 0.0 5 Unmodified _YVKDVEANF_ ENSG00000179397|ENST00000366534|CATSPERE;ENST00000473875.5_1_1:244724068-244773670:+|nuORF;nc|ENSG00000179397|Q5SY80-2|CATSPERE;nc|ENSG00000179397|Q5SY80-3|CATSPERE 5.230669730166228 0.7320841359114558 4 P{M(Oxidation (M))|F} 2 8 17.474 0.0 0.0 1.6127 0.0 0.0 821.3911249587078 0.0 821.3911249587078 0.0 5.880456295278407 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F} 1.6127 - 107 + 1 1.332 47245.0 1.0 7697 4765 12459 HBL1_DMSO_200M_050219_2,12464 HBL1_DMSO_200M_050219_2,12464,YVKDVEANF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12465 66.718 215.0 455350.0 25 0 42336.0 + 18352 KVLSTEEMEL 10 136 589.8003453739838 1177.5861378147674 2 589.8026611208916 MULTI CID FTMS 0 0 0 12459 314024.09375 0.5793090355821113 -1 0.055938720703125 6 Unmodified _KVLSTEEMEL_ ENSG00000152082|ENST00000281871|MZT2B;ENSG00000173272|ENST00000309451|MZT2A 29.84058131909904 0.2982332456971691 4 {[MG]|[TS]}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}EME{I|L} 10 4 + 58.776 0.0 0.0 4.9912 4.9912 71.31 0.0 0.0 0.0 3.177418734074564 35.54430432929071 3.177418734074564 1.8752072083646285 0 0.2887254899964357 0.0 1.7472131598060507 0.0 {[MG]|[TS]}{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}EME{I|L};{[MG]|[TS]}{I|L}{I|L}[VG]SEME{I|L};{[TV]|[{I|L}S]}T{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}EME{I|L};{[MG]|[TS]}{I|L}{I|L}WWME{I|L};{[MG]|[TS]}{I|L}G[{I|L}V]SEME{I|L};{[TV]|[{I|L}S]}T{I|L}[VG]SEME{I|L};{I|L}{I|L}{[MG]|[TS]}{[QD]|[EN]|[WG]|[KD]|[RS]}EME{I|L};{[TV]|[{I|L}S]}T{I|L}WWME{I|L};{[TV]|[{I|L}S]}TG[{I|L}V]SEME{I|L};{I|L}{I|L}{[MG]|[TS]}[VG]SEME{I|L} 4.9912;4.832;4.4584;4.4365;4.311;4.2991;3.9116;3.9037;3.7781;3.7523 -;-;-;-;-;-;-;-;-;- 2158 1 1.332 77836.4 1.0 7698 4765 12459 HBL1_DMSO_200M_050219_2,12465 HBL1_DMSO_200M_050219_2,12465,KVLSTEEMEL False True KVLSTEEMEL 66.718129 589.802661120892 3768923.5 12459.0 ENSG00000152082|ENST00000281871|MZT2B;;ENSG00000173272|ENST00000309451|MZT2A 4.583617051442464 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12466 66.729 617.0 358560.0 25 0 30686.0 + 5916 DPYSFGRTTI 10 177 578.7849501890403 1155.5553474448805 2 578.7844726443291 MULTI CID FTMS 0 0 0 12459 306318.0 1.0 0 0.0 7 Unmodified _DPYSFGRTTI_ ENSG00000196187|ENST00000366835|TMEM63A 92.20098385977256 0.0091758589193359 4 DPYS{M(Oxidation (M))|F}[WK]T{I|L} 9 3 + 94.521 0.0 0.0 8.1797 8.1797 80.789 0.0 0.0 0.0 55.821301259791056 13.158041660607084 13.158041660607084 1.249387366082999 0 2.079689690656103 1.6989700043360187 1.8352587893338912 0.0 DPYS{M(Oxidation (M))|F}[WK]T{I|L};DPYS{M(Oxidation (M))|F}{I|L}[NS]T{I|L};DPYS{I|L}{M(Oxidation (M))|F}[NS]T{I|L};DPY{I|L}S{M(Oxidation (M))|F}[NS]T{I|L};DPYS{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}M{[CT]|[{M(Oxidation (M))|F}G]};DP{I|L}YS{M(Oxidation (M))|F}[NS]T{I|L};DPY{I|L}[WK]M{[CT]|[{M(Oxidation (M))|F}G]};DPY{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]}M{[CT]|[{M(Oxidation (M))|F}G]};[DP]YS[YR]AAT{I|L};[DP]YS[YR][K{I|L}]D 8.1797;8.0716;7.6587;7.0036;5.904;5.7798;5.357;5.2489;4.8263;4.6846 -;-;-;-;-;-;-;-;-;- 1398 + 1 1.332 164626.2 1.0 7699 4765 12459 HBL1_DMSO_200M_050219_2,12466 HBL1_DMSO_200M_050219_2,12466,DPYSFGRTTI True True DPYSFGRTTI 66.728906 578.784472644329 3393743.25 12459.0 ENSG00000196187|ENST00000366835|TMEM63A 5.807568232218425 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12467 66.734 289.0 575630.0 25 0 72747.0 + 3631 DADYAIKI 8 124 454.7399449691237 907.4653370050474 2 454.7404357790947 MULTI CID FTMS 0 0 0 12459 266889.28125 0.0239988275485953 -4 0.3599472045898437 8 Unmodified _DADYAIKI_ ENSG00000143368|ENST00000271628|SF3B4;ENST00000553618.1_1_14:67665960-67666731:+|nuORF 71.13359017698441 0.1103988542940256 4 {[DA]|[EG]}DYA{I|L}K{I|L} 8 0 + 79.487 0.0 0.0 8.7592 8.7592 82.179 0.0 0.0 0.0 22.764209843288903 1.5490195998574308 1.5490195998574308 1.5490195998574308 0 1.6549471895720984 2.0 0.0 0.3252574989159953 + + {[DA]|[EG]}DYA{I|L}K{I|L};{[DA]|[EG]}DYA{I|L}{I|L}K;{[DA]|[EG]}DY{I|L}AK{I|L};{[DA]|[EG]}DY{I|L}A{I|L}K 8.7592;8.5886;7.3924;7.2217 +;-;-;- + 234 + 1 1.332 128958.2 1.0 7700 4765 12459 HBL1_DMSO_200M_050219_2,12467 HBL1_DMSO_200M_050219_2,12467,DADYAIKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12468 66.738 215.0 500410.0 25 0 63894.0 -1 0 115 457.2658441939189 456.2585677273189 1 457.2668334841728 MULTI CID FTMS 0 0 0 12459 192578.15625 0.028958883908395 -5 0.4790802001953125 9 4 [{I|L}P]D{I|L} 4 -1 + 40.111 0.0 0.0 8.7914 8.7914 95.174 0.0 0.0 0.0 6.1928031367991565 15.930252942708222 6.1928031367991565 12.455126678141497 0 0.1923877696554315 1.3010299956639813 0.5 0.0 [{I|L}P]D{I|L};{NN|[MP]|[D{I|L}]|[EV]}P{I|L};EVP{I|L};E[{I|L}P]V 8.7914;6.0615;4.9751;2.0182 -;-;-;- 64 1 1.332 86607.6 1.0 7701 4765 12459 HBL1_DMSO_200M_050219_2,12468 HBL1_DMSO_200M_050219_2,12468, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12469 66.752 780.0 164540.0 25 0 6254.7 + 13951 HYMSPYQLNAY 11 156 693.8113929903692 1385.6082330475383 2 693.8126708865166 MULTI CID FTMS 0 0 0 12459 164492.421875 0.7907432953852205 -1 0.055938720703125 10 Unmodified _HYMSPYQLNAY_ ENSG00000124772|ENST00000244751|CPNE5;nc|ENSG00000124772|Q9HCH3-2|CPNE5 86.33184430468982 0.0029476721545555 4 {[WN]|[YH]}MSPYQ{I|L}NAY 11 0 + 108.04 0.0 0.0 7.7976 7.7976 88.594 0.0 0.0 0.0 21.34698573897456 82.21493152572842 21.34698573897456 6.817496819840656 0 1.0941876774005248 1.3979400086720375 1.4916440611282624 0.3494850021680094 + + {[WN]|[YH]}MSPYQ{I|L}NAY;{[WN]|[YH]}MSPY{I|L}QNAY;{[WN]|[YH]}MSPY[AG]{I|L}NAY;{[WN]|[YH]}MSPYQ{I|L}GGAY;{[WN]|[YH]}MSPQY{I|L}NAY;{[WN]|[YH]}MSPY{I|L}[AG]NAY;{[WN]|[YH]}MSPY{I|L}QGGAY;{[WN]|[YH]}MSPY[AG]{I|L}GGAY;{[WN]|[YH]}[WE]YQ{I|L}NAY;{[WN]|[YH]}MSPQY{I|L}GGAY 7.7976;7.3056;7.1388;7.1388;6.9254;6.6468;6.6468;6.4822;6.315;6.2666 +;-;-;-;-;-;-;-;-;- + 4672 1 1.332 96115.9 1.0 7702 4765 12459 HBL1_DMSO_200M_050219_2,12469 HBL1_DMSO_200M_050219_2,12469,HYMSPYQLNAY True True HYMSPYQLNAY 66.75177 693.812670886517 1618133.5 12459.0 ENSG00000124772|ENST00000244751|CPNE5;;nc|ENSG00000124772|Q9HCH3-2|CPNE5 8.212495803833008 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12470 66.766 800.0 138790.0 25 0 6091.3 -1 0 95 722.3453022466246 3606.6901289001225 5 722.7468749880791 MULTI CID FTMS 0 0 0 12459 142219.078125 1.0 0 0.0 11 4 QY{I|L} 3 -1 16.198 0.0 0.0 0.44911 0.0 0.0 2888.35060360891 311.09987924826726 3199.4504828571776 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QY{I|L} 0.44911 - 145 + 1 1.332 83075.2 0.9800000190734864 7703 4765 12459 HBL1_DMSO_200M_050219_2,12470 HBL1_DMSO_200M_050219_2,12470, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12471 66.781 800.0 187170.0 25 0 51464.0 -1 FYPECEIRMM 10 111 704.2902897415051 1406.5660265498102 2 704.2903320193291 MULTI CID FTMS 0 0 0 12459 117106.6640625 0.917569724517645 1 -0.099273681640625 12 Carbamidomethyl (C),2 Oxidation (M) _FYPEC(Carbamidomethyl (C))EIRM(Oxidation (M))M(Oxidation (M))_ ENSG00000066923|ENST00000615138|STAG3;nc|ENSG00000292277|Q9UJ98-2|STAG3;nc|ENSG00000292277|Q9UJ98-3|STAG3;nc|ENSG00000292277|Q9UJ98|STAG3 8.155526934196011 0.6889124077178598 4 {[QN]|[E{I|L}]|[KN]}E{[DA]|[EG]}{M(Oxidation (M))|F} 6 -1 25.608 0.0 0.0 1.8206 0.0 0.0 0.0 699.2538066613914 699.2538066613914 3.160364270168809 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3054621874040891 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}E{[DA]|[EG]}{M(Oxidation (M))|F} 1.8206 - 641 1 1.332 109516.4 0.9200000166893004 7704 4765 12459 HBL1_DMSO_200M_050219_2,12471 HBL1_DMSO_200M_050219_2,12471,FYPECEIRMM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12472 66.794 800.0 246540.0 25 0 32664.0 + 36424 SYYDNVRPLAY 11 137 680.8300659771978 1359.6455790211955 2 680.8287841677666 MULTI CID FTMS 0 0 0 12459 110181.625 0.4226968670869364 -2 0.1956253051757812 13 Unmodified _SYYDNVRPLAY_ ENSG00000108830|ENST00000587250|RND2 93.93812099017352 0.00052454058588 4 {[{M(Oxidation (M))|F}C]|[YS]}YDNVR[{I|L}P]AY 11 0 {[{M(Oxidation (M))|F}C]|[YS]} + + 72.432 6.2236 2.4885 5.3272 5.3272 53.885 0.0 0.0 0.0 0.0 34.521208244421075 0.0 0.0 0 2.4049471895720984 0.0 0.805462187404089 0.3494850021680094 + + {[{M(Oxidation (M))|F}C]|[YS]}YDNVR[{I|L}P]AY 5.3272 + + 1520 + 1 1.332 144436.3 0.9100000262260436 7705 4765 12459 HBL1_DMSO_200M_050219_2,12472 HBL1_DMSO_200M_050219_2,12472,SYYDNVRPLAY True True SYYDNVRPLAY 66.794437 680.828784167767 1872570.75 12459.0 ENSG00000108830|ENST00000587250|RND2 10.666119575500488 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12474 66.799 3.1 15240000.0 25 0 1891000.0 + 32367 RYPTSIASL 9 61 504.27999202486376 1006.5454311165277 2 504.2799865603447 MULTI CID FTMS 0 0 0 12473 17237672.0 0.8852965964376893 -3 0.2948989868164062 1 Unmodified _RYPTSIASL_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 49.55428908609986 0.0413471690215031 4 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 5 + 70.64 0.0 0.0 7.0181 7.0181 82.886 0.0 0.0 0.0 3.756636139608858 14.771212547196626 3.756636139608858 3.756636139608858 0 1.274227503252014 1.3979400086720375 0.805462187404089 0.0 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L};[YR][TP]S{I|L}AS{I|L} 7.0181;6.6448;5.2793 -;-;+ + 207 1 1.339 41693.4 1.0 7706 4766 12473 HBL1_DMSO_200M_050219_2,12474 HBL1_DMSO_200M_050219_2,12474,RYPTSIASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12475 66.8 8.4 5220200.0 25 0 720200.0 + 21613 LPKSIYSQI 9 81 524.8054791175971 1047.596405301994 2 524.8058349490166 MULTI CID FTMS 0 0 0 12473 5941890.5 1.0 0 0.0 2 Unmodified _LPKSIYSQI_ ENSG00000164934|ENST00000612750|DCAF13 72.96794272382148 0.0199516581995792 4 [{I|L}P]KS{I|L}YSQ{I|L} 9 0 + 58.981 0.0 0.0 5.6301 5.6301 72.687 0.0 0.0 0.0 14.019862825870677 14.973024840566469 14.019862825870677 1.2371250542002343 0 0.6861818737241735 1.5228787452803376 1.1307196863200843 0.0 + + [{I|L}P]KS{I|L}YSQ{I|L};[{I|L}P]KSY{I|L}SQ{I|L};[{I|L}P]KSYS{I|L}Q{I|L};[{I|L}P]KSYSQ{I|L}{I|L};[{I|L}P]KS{I|L}YS[AG]{I|L};[{I|L}P]KSY{I|L}S[AG]{I|L};[{I|L}P]KSYS{I|L}[AG]{I|L};{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}T{I|L}SQ{I|L};[KP]{I|L}S{I|L}YSQ{I|L};[{I|L}P]KSYS[AG]{I|L}{I|L} 5.6301;5.5121;5.344;4.9763;4.7512;4.6331;4.465;4.2919;4.1009;4.0973 +;-;-;-;-;-;-;-;-;- + 532 1 1.339 40519.5 1.0 7707 4766 12473 HBL1_DMSO_200M_050219_2,12475 HBL1_DMSO_200M_050219_2,12475,LPKSIYSQI True True LPKSIYSQI 66.800022 524.805834949017 122985024.0 12473.0 ENSG00000164934|ENST00000612750|DCAF13 4.922771135965983 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12476 66.801 11.0 5462900.0 25 0 799120.0 21074 LPAGGILVF 9 75 443.773538906193 885.532524879186 2 443.7736083865166 MULTI CID FTMS 0 0 0 12473 4935029.5 0.2879917495379613 -10 0.9202194213867188 3 Unmodified _LPAGGILVF_ ENSG00000150990|ENST00000308736|DHX37 20.871210003555333 0.2717241269066626 4 {I|L}P 2 7 44.464 0.0 0.0 5.0212 0.0 0.0 0.0 672.3725354025222 672.3725354025222 16.755828144472034 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}P 5.0212 + + 165 + 1 1.339 54122.2 1.0 7708 4766 12473 HBL1_DMSO_200M_050219_2,12476 HBL1_DMSO_200M_050219_2,12476,LPAGGILVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12477 66.802 20.0 2478300.0 25 0 194210.0 + 3104 AVPDGPLQEV 10 90 512.769184801145 1023.52381666909 2 512.7692138552666 MULTI CID FTMS 0 0 0 12473 2433001.25 0.6676719473919781 -3 0.2948989868164062 4 Unmodified _AVPDGPLQEV_ ENSG00000120800|ENST00000261637|UTP20 39.94969957227396 0.1580982266129622 4 {[VA]|[{I|L}G]}PDPQE 7 3 47.465 0.0 0.0 4.6374 0.0 0.0 0.0 284.1630827142972 284.1630827142972 29.761904821837533 0.0 0.0 0.0 0 0.8182503180159344 2.0 0.75 0.4247425010840047 {[VA]|[{I|L}G]}PDPQE 4.6374 - 348 1 1.339 45281.6 1.0 7709 4766 12473 HBL1_DMSO_200M_050219_2,12477 HBL1_DMSO_200M_050219_2,12477,AVPDGPLQEV False True AVPDGPLQEV 66.802378 512.769213855267 107868768.0 12473.0 ENSG00000120800|ENST00000261637|UTP20 5.014311790466309 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12478 66.804 21.0 3263900.0 25 0 259540.0 + 44529 YPDRVPVI 8 76 479.7724680190831 957.5303831049662 2 479.7718078494072 MULTI CID FTMS 0 0 0 12473 1858942.375 0.8419245093225989 1 -0.043609619140625 5 Unmodified _YPDRVPVI_ ENSG00000034713|ENST00000037243|GABARAPL2;ENSG00000139112|ENST00000266458|GABARAPL1;ENSG00000170296|ENST00000302386|GABARAP;nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 26.268140514670165 0.4916104673212489 4 [{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPV{I|L} 8 3 + 45.399 0.0 0.0 4.7412 4.7412 74.479 0.0 0.0 0.0 11.760912590556812 13.399480616943508 11.760912590556812 4.247425010840047 0 0.805462187404089 1.6989700043360187 0.0 0.0 [{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPV{I|L};[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PYV{I|L};[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PVY{I|L};[VP][RD]YPV{I|L};[VP][RD]PYV{I|L};[VP][RD]PVY{I|L};Y[SG]H{I|L}[R{I|L}]{I|L};[VP][WP][{I|L}A]Y{I|L};[EP]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[R{I|L}]{I|L} 4.7412;4.2977;4.1138;3.513;3.0694;2.8855;2.1229;1.556;0.47907 -;-;-;-;-;-;-;-;- 128 1 1.339 60450.6 1.0 7710 4766 12473 HBL1_DMSO_200M_050219_2,12478 HBL1_DMSO_200M_050219_2,12478,YPDRVPVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12479 66.805 22.0 1961600.0 25 0 194660.0 + 12997 HALRMLQSI 9 67 534.8029142345206 1067.591275535841 2 534.8032104372978 MULTI CID FTMS 0 0 0 12473 1698273.125 0.4043781358522976 2 -0.1560516357421875 6 Unmodified _HALRMLQSI_ ENSG00000185988|ENST00000454744|PLK5;nc|ENSG00000185988|Q496M5-2|PLK5 34.40172386719151 0.1061884637610825 4 HA{I|L}[YV]RQD 8 5 40.047 0.0 0.0 3.7512 0.0 0.0 0.0 82.06695734195546 82.06695734195546 20.098812726971715 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 HA{I|L}[YV]RQD 3.7512 - 108 + 1 1.339 40423.0 1.0 7711 4766 12473 HBL1_DMSO_200M_050219_2,12479 HBL1_DMSO_200M_050219_2,12479,HALRMLQSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12480 66.806 23.0 1539900.0 25 0 291440.0 + 22856 LSAFVHKLS 9 63 501.2907679302925 1000.566982927385 2 501.2911559939384 MULTI CID FTMS 0 0 0 12473 1549324.0 0.8486790674890851 -4 0.3402175903320312 7 Unmodified _LSAFVHKLS_ REV__ENSG00000147251|ENST00000276202|DOCK11 6.723162845929126 0.6799819581413107 4 V 1 -1 11.259 0.0 0.0 1.1253 0.0 0.0 883.4877496893952 0.0 883.4877496893952 0.0 0.4216044285001796 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1253 + + 14 + 1 1.339 35753.1 1.0 7712 4766 12473 HBL1_DMSO_200M_050219_2,12480 HBL1_DMSO_200M_050219_2,12480,LSAFVHKLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12481 66.807 41.0 1172600.0 25 0 53195.0 + 43349 WNPRRWWRWCW 11 67 866.4155373743996 1730.8165218155991 2 866.4160644412041 MULTI CID FTMS 0 0 0 12473 1322307.0 0.4579865065621554 2 -0.1560516357421875 8 Unmodified _WNPRRWWRWCW_ ENST00000564348.5_1_19:7982609-7983760:+|nuORF;ENST00000566166.1_1_19:7982552-7983971:+|nuORF 0.0 0.8751479354844584 4 [MN]PN{I|L}NADQ 9 9 65.856 0.0 0.0 3.8049 0.0 0.0 0.0 730.3644503229124 730.3644503229124 42.21130963036558 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.0 0.805462187404089 [MN]PN{I|L}NADQ 3.8049 - 447 + 1 1.339 40823.5 1.0 7713 4766 12473 HBL1_DMSO_200M_050219_2,12481 HBL1_DMSO_200M_050219_2,12481,WNPRRWWRWCW False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12482 66.809 60.0 1231100.0 25 0 127350.0 + 21771 LPNAPKALI 9 97 468.79776719473006 935.58098145626 2 468.7976257205009 MULTI CID FTMS 0 0 0 12473 1175099.125 0.9750802947190892 -1 0.099273681640625 9 Unmodified _LPNAPKALI_ ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 54.773552608820026 0.0299037012502309 4 {I|L}PNA 4 5 57.027 0.0 0.0 6.0953 0.0 0.0 0.0 537.3409296514834 537.3409296514834 17.213855345942335 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.3807196863200844 + {I|L}PNA 6.0953 + + 774 + 1 1.339 64242.5 1.0 7714 4766 12473 HBL1_DMSO_200M_050219_2,12482 HBL1_DMSO_200M_050219_2,12482,LPNAPKALI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12483 66.81 46.0 958980.0 25 0 189820.0 + 38894 TVLDIHDNQL 10 86 584.3041847415572 1166.5938165499142 2 584.3042480349541 MULTI CID FTMS 0 0 0 12473 1037812.9375 0.6133192647322697 1 -0.043609619140625 10 Unmodified _TVLDIHDNQL_ ENSG00000066557|ENST00000370952|LRRC40 38.17557092003332 0.1768326257063233 4 {[TV]|[{I|L}S]}{I|L}D{I|L}{M(Oxidation (M))|F}{I|L}{I|L} 8 4 66.292 0.0 0.0 5.6825 0.0 0.0 0.0 249.06325708560783 249.06325708560783 34.51667520279372 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}{I|L}D{I|L}{M(Oxidation (M))|F}{I|L}{I|L} 5.6825 - 722 + 1 1.339 39885.9 1.0 7715 4766 12473 HBL1_DMSO_200M_050219_2,12483 HBL1_DMSO_200M_050219_2,12483,TVLDIHDNQL False True TVLDIHDNQL 66.809859 584.304248034954 11879688.0 12473.0 ENSG00000066557|ENST00000370952|LRRC40 6.043530464172363 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12484 66.811 38.0 879550.0 25 0 73984.0 + 17931 KQVSDLISV 9 73 494.78636089299874 0 494.7867309451103 PEAK CID FTMS 0 0 0 12473 889149.375 0.4707620630050725 2 -0.1560516357421875 11 Unmodified _KQVSDLISV_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62496043-62497015:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5 22.736283301280096 0.1762661025464585 4 {I|L}{I|L}E{I|L}ED 6 8 17.74 0.0 0.0 1.7964 0.0 0.0 204.10884131549125 68.05137811832265 272.1602194338139 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{I|L}E{I|L}ED 1.7964 - 28 + 1 1.339 31279.3 1.0 7716 4766 12473 HBL1_DMSO_200M_050219_2,12484 HBL1_DMSO_200M_050219_2,12484,KQVSDLISV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12485 66.812 47.0 1574900.0 25 0 114970.0 + 4510 DAYKIRIRI 9 96 383.2366474054595 1146.6881128165785 3 383.2361938357353 MULTI CID FTMS 0 0 0 12473 830660.75 0.088877974629152 3 -0.2225494384765625 12 Unmodified _DAYKIRIRI_ ENSG00000143622|ENST00000368323|RIT1;nc|ENSG00000143622|Q92963-2|RIT1;nc|ENSG00000143622|Q92963-3|RIT1 32.30548876998284 0.1201446275138228 4 DA{I|L}Y 4 6 55.191 0.0 0.0 4.8131 0.0 0.0 0.0 681.4543200777597 681.4543200777597 37.23197507588033 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 DA{I|L}Y 4.8131 - 37 + 1 1.339 66822.9 1.0 7717 4766 12473 HBL1_DMSO_200M_050219_2,12485 HBL1_DMSO_200M_050219_2,12485,DAYKIRIRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12486 66.821 517.0 348080.0 25 0 35432.0 -1 0 126 599.63652548401 1795.8877470522298 3 599.6359130740166 MULTI CID FTMS 0 0 0 12473 414791.1875 1.0 0 0.0 13 4 [H{I|L}][NP]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q 15 -1 + 94.421 0.0 0.0 5.2576 5.2576 73.866 0.0 0.0 0.0 12.04119982655925 0.0 0.0 2.7422750325201406 0 1.6549471895720984 1.6989700043360187 0.7059771852360797 0.0 [H{I|L}][NP]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP][VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}][NP]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}{I|L}HK;[H{I|L}][NP][VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}{I|L}HK;[NP]{I|L}H{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP]{I|L}H[VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[QP]VH{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[VP]QH{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[WP]{I|L}{I|L}{M(Oxidation (M))|F}GDYET{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q;[QP]VH[VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K 5.2576;5.1049;4.78;4.6273;4.5872;4.4345;4.296;4.2519;4.2359;4.1433 -;-;-;-;-;-;-;-;-;- 4451 1 1.339 138684.2 1.0 7718 4766 12473 HBL1_DMSO_200M_050219_2,12486 HBL1_DMSO_200M_050219_2,12486, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12487 66.823 36.0 1245600.0 25 0 124180.0 + 39392 VAKNWQNL 8 83 486.76707523539216 0 486.7648803591728 PEAK CID FTMS 0 0 0 12473 549327.6875 0.8045399182282706 -2 0.15521240234375 14 Unmodified _VAKNWQNL_ REV__ENSG00000118965|ENST00000281405|WDR35;REV__nc|ENSG00000118965|Q9P2L0|WDR35 10.183394434864962 0.5394990767616434 4 VM 2 -1 9.464 0.0 0.0 0.97414 0.0 0.0 301.2104067190281 437.17841516666255 738.3888218856906 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VM 0.97414 - 76 + 1 1.339 42970.4 1.0 7719 4766 12473 HBL1_DMSO_200M_050219_2,12487 HBL1_DMSO_200M_050219_2,12487,VAKNWQNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12488 66.825 90.0 583070.0 25 0 58936.0 -1 LEALLAICL 9 90 508.2958858558062 1014.5772187784124 2 509.8037902712822 MULTI CID FTMS 0 0 0 12473 401275.875 0.4671851262504582 -16 1.5152359008789062 15 Carbamidomethyl (C) _LEALLAIC(Carbamidomethyl (C))L_ ENSG00000143669|ENST00000389793|LYST;ENST00000465349.5_1_1:235954948-235996891:-|nuORF;ENST00000489585.5_1_1:235926109-235996891:-|nuORF;nc|ENSG00000143669|Q99698-2|LYST;nc|ENSG00000143669|Q99698-3|LYST 4.75600775471527 0.7486543447549536 4 {I|L} 1 -1 11.109 0.0 0.0 1.095 0.0 0.0 883.4821545467703 0.0 883.4821545467703 0.0 -3.5834938564822494 -3.5834938564822494 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.095 + + 17 + 1 1.339 47008.5 1.0 7720 4766 12473 HBL1_DMSO_200M_050219_2,12488 HBL1_DMSO_200M_050219_2,12488,LEALLAICL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12489 66.827 137.0 371500.0 25 0 25983.0 + 13846 HVFDHPWETV 10 76 633.7988996022467 1265.583246271293 2 633.7986328005791 MULTI CID FTMS 0 0 0 12473 387159.40625 0.4934453042902507 3 -0.2225494384765625 16 Unmodified _HVFDHPWETV_ ENSG00000101166|ENST00000355937|PRELID3B;ENST00000466051.1_1_20:57613469-57617839:-|nuORF;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 81.89019881105858 0.0155187237978306 4 [WP]{[QS]|[NT]}H[WP]ETV 10 4 + 59.384 0.0 0.0 4.6922 4.6922 83.958 0.0 0.0 0.0 12.697180143148614 17.17802475701326 12.697180143148614 20.79181246047625 0 1.0228787452803376 1.3010299956639813 1.25 0.0 [WP]{[QS]|[NT]}H[WP]ETV;[PS][WQ]H[WP]ETV;{[MS]|[{M(Oxidation (M))|F}A]}E[C(Carbamidomethyl (C))K][HQ]{M(Oxidation (M))|F}TV;{[MS]|[{M(Oxidation (M))|F}A]}E[C(Carbamidomethyl (C))K][HQ]{M(Oxidation (M))|F}S{I|L} 4.6922;3.0494;1.7028;1.1919 -;-;-;- 163 1 1.339 43163.7 1.0 7721 4766 12473 HBL1_DMSO_200M_050219_2,12489 HBL1_DMSO_200M_050219_2,12489,HVFDHPWETV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12490 66.829 56.0 1204100.0 25 0 206850.0 -1 IMMKHVPVL 9 94 542.3060065440465 1082.5974601548928 2 542.3071166872978 MULTI CID FTMS 0 0 0 12473 370551.875 0.5941951611744215 -1 0.099273681640625 17 Oxidation (M) _IMM(Oxidation (M))KHVPVL_ ENST00000397457.6_2_6:8014843-8014969:-|nuORF 8.593279151180031 0.6146971463335029 4 D{I|L} 2 -1 20.969 0.0 0.0 1.9369 0.0 0.0 0.0 851.4656031528535 851.4656031528535 6.989700043360188 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L} 1.9369 - 126 + 1 1.339 57283.3 1.0 7722 4766 12473 HBL1_DMSO_200M_050219_2,12490 HBL1_DMSO_200M_050219_2,12490,IMMKHVPVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12491 66.833 212.0 492760.0 25 0 57430.0 + 18226 KVFGNEIKL 9 111 349.8783860045793 1046.613328613938 3 349.8777953982353 MULTI CID FTMS 0 0 0 12473 387219.8125 1.0 0 0.0 18 Unmodified _KVFGNEIKL_ ENSG00000115053|ENST00000322723|NCL;ENST00000461347.5_1_2:232323706-232327997:-|nuORF;ENST00000494618.1_1_2:232322276-232325237:-|nuORF 20.453626601364224 0.2830276176381075 4 KV{M(Oxidation (M))|F}G{M(Oxidation (M))|F}K 6 4 23.932 0.0 0.0 2.2866 0.0 0.0 322.222141060291 0.0 322.222141060291 0.0 5.968426266703983 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 KV{M(Oxidation (M))|F}G{M(Oxidation (M))|F}K 2.2866 - 133 + 1 1.339 89878.9 1.0 7723 4766 12473 HBL1_DMSO_200M_050219_2,12491 HBL1_DMSO_200M_050219_2,12491,KVFGNEIKL False True KVFGNEIKL 66.832824 349.877795398235 2080071.875 12473.0 ENST00000461347.5_1_2:232323706-232327997:-|nuORF;;ENST00000494618.1_1_2:232322276-232325237:-|nuORF;;ENSG00000115053|ENST00000322723|NCL 3.160598119099935 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12492 66.836 168.0 674010.0 25 0 90017.0 + 15283 IPIHIVPHV 9 114 342.2152645031107 1023.6239641095322 3 342.2147704958916 MULTI CID FTMS 0 0 0 12473 366234.875 0.9144424198955932 1 -0.043609619140625 19 Unmodified _IPIHIVPHV_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-4|BRCC3;nc|ENSG00000185515|P46736|BRCC3 45.7499826716795 0.0496882803020414 4 [{I|L}P]{I|L}H{I|L}VPHV 9 0 + 63.208 0.0 0.0 6.1749 6.1749 76.971 0.0 0.0 0.0 26.024146622189704 2.319490765206808 2.319490765206808 2.319490765206808 0 0.566901560044258 2.0 0.0 0.0 + + [{I|L}P]{I|L}H{I|L}VPHV;[{I|L}P]{I|L}H{I|L}VPVH 6.1749;5.9483 +;- + 157 + 1 1.339 95799.7 1.0 7724 4766 12473 HBL1_DMSO_200M_050219_2,12492 HBL1_DMSO_200M_050219_2,12492,IPIHIVPHV True True IPIHIVPHV 66.836105 342.214770495892 3424385.5 12473.0 nc|ENSG00000185515|P46736-4|BRCC3;;nc|ENSG00000185515|P46736-3|BRCC3;;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;;ENSG00000185515|ENST00000330045|BRCC3;;nc|ENSG00000185515|P46736|BRCC3 5.066769758860271 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12493 66.838 86.0 850400.0 25 0 63424.0 + 43178 VYVAAVREF 9 79 527.2891734677037 1052.5637940022073 2 527.2877685427666 MULTI CID FTMS 0 0 0 12473 310198.53125 1.0 0 0.0 20 Unmodified _VYVAAVREF_ ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 23.78978130925829 0.2284941198415988 4 VYVAAV 6 3 66.503 0.0 0.0 6.3182 0.0 0.0 0.0 447.2006929986938 447.2006929986938 41.97743773147742 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + VYVAAV 6.3182 + + 191 + 1 1.339 65036.3 1.0 7725 4766 12473 HBL1_DMSO_200M_050219_2,12493 HBL1_DMSO_200M_050219_2,12493,VYVAAVREF False True VYVAAVREF 66.838028 527.287768542767 2687448.5 12473.0 ENSG00000115368|ENST00000314761|WDR75;;ENST00000436347.5_1_2:190313199-190340140:+|nuORF 4.588192145029704 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12495 66.852 655.0 346840.0 25 0 16224.0 -1 WRRECPRWWRC 11 168 874.4121775252343 0 874.4121581912041 PEAK CID FTMS 0 0 0 12494 268847.875 0.8523239415340308 1 -0.1124420166015625 1 2 Carbamidomethyl (C) _WRREC(Carbamidomethyl (C))PRWWRC(Carbamidomethyl (C))_ ENST00000599470.5_2_19:39616427-39616532:+|nuORF 0.2690200627634905 0.4761840153648598 4 MPNNNEA[RH]MN{I|L}S 13 -1 78.655 0.0 0.0 4.5028 0.0 0.0 114.05471432506222 121.0411852472289 235.0958995722911 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 1.0114393726401687 1.8684151806525389 MPNNNEA[RH]MN{I|L}S 4.5028 - 122812 + 1 1.339 150780.6 1.0 7726 4767 12494 HBL1_DMSO_200M_050219_2,12495 HBL1_DMSO_200M_050219_2,12495,WRRECPRWWRC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12496 66.854 88.0 905310.0 25 0 232730.0 33358 SGHGNAIP 8 80 376.6876933301991 751.3608337271983 2 376.6874877810478 MULTI CID FTMS 0 0 0 12494 528222.125 0.209837633907658 -2 0.14288330078125 2 Unmodified _SGHGNAIP_ ENSG00000142303|ENST00000597188|ADAMTS10;ENST00000601163.1_1_19:8661189-8662174:-|nuORF;nc|ENSG00000142303|Q9H324|ADAMTS10 2.889219685676258 0.8067950007271085 4 {[TV]|[{I|L}S]}{I|L} 3 6 28.706 0.0 0.0 3.8206 0.0 0.0 0.0 435.137847237217 435.137847237217 11.522452638867442 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3494850021680094 0.0 {[TV]|[{I|L}S]}{I|L} 3.8206 - 104 1 1.339 68446.9 1.0 7727 4767 12494 HBL1_DMSO_200M_050219_2,12496 HBL1_DMSO_200M_050219_2,12496,SGHGNAIP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12497 66.855 64.0 815980.0 25 0 97235.0 + 37165 RALPDMEVV 9 87 515.2726752307466 1028.530797528293 2 515.2723876833916 MULTI CID FTMS 0 0 0 12494 498358.125 0.7312683855020904 -1 0.043609619140625 3 Unmodified _TICHKTEVV_ ENSG00000197102|ENST00000360184|DYNC1H1 18.1463463914782 0.3454829746528889 4 MEVV 4 6 37.423 0.0 0.0 3.6385 0.0 0.0 552.3022368103369 0.0 552.3022368103369 0.0 19.006375246153908 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 MEVV 3.6385 - 229 1 1.339 45740.1 1.0 7728 4767 12494 HBL1_DMSO_200M_050219_2,12497 HBL1_DMSO_200M_050219_2,12497,TICHKTEVV False False RALPDMEVV 66.855149 515.272387683392 5470752.5 12494.0 ENSG00000197102|ENST00000360184|DYNC1H1 5.1849799156188965 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12498 66.858 119.0 577610.0 25 0 69759.0 + 15171 IPDGGVHII 9 96 460.76373907398806 919.512925214776 2 460.7638122439384 MULTI CID FTMS 0 0 0 12494 372684.3125 0.276362332423488 -3 0.198822021484375 4 Unmodified _IPDGGVHII_ ENSG00000183808|ENST00000520560|RBM12B 30.22481116460888 0.1466181017706357 4 {I|L}PD{[NV]|[RG]}H{I|L}{I|L} 8 2 + 47.56 0.0 0.0 5.1723 5.1723 83.802 0.0 0.0 0.0 28.96753414089354 0.8625288321745757 0.8625288321745757 10.969100130080562 0 0.7887254899964358 1.6989700043360187 0.0 0.0 {I|L}PD{[NV]|[RG]}H{I|L}{I|L};{I|L}P{[{M(Oxidation (M))|F}C]|[YS]}[KS]{I|L}{I|L};{I|L}P{[{M(Oxidation (M))|F}C]|[YS]}[K{I|L}]S{I|L} 5.1723;3.9794;3.7138 -;-;- 254 + 1 1.339 60573.5 1.0 7729 4767 12494 HBL1_DMSO_200M_050219_2,12498 HBL1_DMSO_200M_050219_2,12498,IPDGGVHII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12499 66.86 97.0 376110.0 25 0 44586.0 + 44795 YPMRIDESI 9 69 562.2762695885935 1122.537986243987 2 562.2765991091728 MULTI CID FTMS 0 0 0 12494 304934.40625 0.3627887337600389 -4 0.3385086059570312 5 Unmodified _YPMRIDESI_ ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L 36.506200033944 0.094635877243972 4 YP 2 7 38.443 0.0 0.0 3.4247 0.0 0.0 0.0 859.401550745906 859.401550745906 -2.302046884880937 0.0 -2.302046884880937 0.0 0 0.3494850021680094 1.3979400086720375 0.0 0.0 + YP 3.4247 + + 108 + 1 1.339 35357.9 1.0 7730 4767 12494 HBL1_DMSO_200M_050219_2,12499 HBL1_DMSO_200M_050219_2,12499,YPMRIDESI True True YPMRIDESI 66.85972 562.276599109173 19848032.0 12494.0 nc|ENSG00000100129|Q9Y262-2|EIF3L;;ENSG00000100129|ENST00000652021|EIF3L 5.112454811731975 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12500 66.874 800.0 403120.0 25 0 40326.0 + 30727 RGLDDIKDLKV 11 192 424.58225270717287 1270.7249287217187 3 424.5818969607353 MULTI CID FTMS 0 0 0 12494 260948.890625 0.1989891245632796 -2 0.14288330078125 6 Unmodified _RGLDDIKDLKV_ ENSG00000155363|ENST00000369645|MOV10;ENST00000488160.5_1_1:113239361-113241636:+|nuORF 68.83013597580353 0.0357948199678185 4 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}D{I|L}KD{I|L}KV 11 4 + 104.61 0.0 0.0 8.232 8.232 94.122 0.0 0.0 0.0 11.817044523977104 15.070623213458036 11.817044523977104 11.817044523977104 0 2.9291746928241125 1.5228787452803376 1.2971062485323517 1.2614393726401687 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}D{I|L}KD{I|L}KV;{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]D{I|L}KD{I|L}KV;{[NV]|[RG]}{NN|[MP]|[D{I|L}]|[EV]}D{I|L}KD{I|L}KV;{NN|[MP]|[D{I|L}]|[EV]}KQ{[QG]|[NA]}KD{I|L}KV;[K{I|L}]DQ{[QG]|[NA]}KD{I|L}KV;{NN|[MP]|[D{I|L}]|[EV]}K[AG]{[QG]|[NA]}KD{I|L}KV;[QP]Y[PA]{I|L}KD{I|L}KV;{NN|[MP]|[D{I|L}]|[EV]}KK{I|L}{[CP]|[EA]}D{I|L}KV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Q{[QG]|[NA]}KD{I|L}KV;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}D{I|L}K{[TV]|[{I|L}S]}RV 8.232;7.302;6.7369;6.5327;6.089;5.8143;5.7793;5.718;5.6027;5.4887 -;-;+;-;-;-;-;-;-;- + 2222 1 1.339 260991.0 0.9900000095367432 7731 4767 12494 HBL1_DMSO_200M_050219_2,12500 HBL1_DMSO_200M_050219_2,12500,RGLDDIKDLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12501 66.878 220.0 355560.0 25 0 49317.0 + 34167 SLMKDFPGA 9 105 483.2422369238442 964.4699209144884 2 483.2419616580009 MULTI CID FTMS 0 0 0 12494 234638.0625 0.9894337572893872 -1 0.043609619140625 7 Unmodified _SLMKDFPGA_ ENSG00000079819|ENST00000337057|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2 31.26834338654808 0.1333407332142048 4 {[TV]|[{I|L}S]}MSR{M(Oxidation (M))|F}PQ 8 4 + 52.814 0.0 0.0 5.476 5.476 75.946 0.0 0.0 0.0 39.31926257837823 2.843181179205061 2.843181179205061 3.064250275506872 0 1.774227503252014 2.0 0.0 0.0 {[TV]|[{I|L}S]}MSR{M(Oxidation (M))|F}PQ;{[TV]|[{I|L}S]}MSR{M(Oxidation (M))|F}PGA;{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}M{M(Oxidation (M))|F}PQ;{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}M{M(Oxidation (M))|F}PGA;{[TV]|[{I|L}S]}M[YQ]VPQ;{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}MPQ;{[TV]|[{I|L}S]}MSR{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{[TV]|[{I|L}S]}M[YQ]VPGA;{[TV]|[{I|L}S]}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}MPGA;{[TV]|[{I|L}S]}AATM{M(Oxidation (M))|F}PQ 5.476;5.1583;4.7558;4.4381;4.1369;4.0549;3.9334;3.8192;3.7371;3.6991 -;-;-;-;-;-;-;-;-;- 746 + 1 1.339 64215.4 1.0 7732 4767 12494 HBL1_DMSO_200M_050219_2,12501 HBL1_DMSO_200M_050219_2,12501,SLMKDFPGA False True SLMKDFPGA 66.877676 483.241961658001 1768881.0 12494.0 nc|ENSG00000079819|O43491-3|EPB41L2;;nc|ENSG00000079819|O43491-2|EPB41L2;;nc|ENSG00000079819|O43491-4|EPB41L2;;ENSG00000079819|ENST00000337057|EPB41L2 6.929471969604492 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12502 66.89 686.0 299320.0 25 0 30297.0 + 41906 VQFEDGQKIVV 11 176 631.3431096617944 1260.6716663903887 2 631.3427001833916 MULTI CID FTMS 0 0 0 12494 233751.640625 0.6454489609639005 -1 0.043609619140625 8 Unmodified _VQFEDGQKIVV_ ENSG00000108946|ENST00000589228|PRKAR1A;ENST00000586541.5_2_17:66524793-66526587:+|nuORF;nc|ENSG00000108946|P10644-2|PRKAR1A 125.18120922955336 0.0506983849239639 4 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E[NS]{I|L}VQVV 11 5 + 74.39 0.0 0.0 5.9008 5.9008 76.17 0.0 0.0 0.0 6.086590976516433 8.050088832413536 6.086590976516433 2.4584719948174723 0 1.805462187404089 1.0969100130080565 1.2174165578762486 0.7742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E[NS]{I|L}VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}EDGQK{I|L}VV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E[NS]{I|L}N{I|L}VV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E[NS]{I|L}QVVV;[VG]A{M(Oxidation (M))|F}E[NS]{I|L}VQVV;{NN|[MP]|[D{I|L}]|[EV]}TG[CS]K{I|L}VQVV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}ED[KA]VQVV;[VG]A{M(Oxidation (M))|F}EDGQK{I|L}VV;[VG]A{M(Oxidation (M))|F}E[NS]{I|L}N{I|L}VV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}E[NS]{I|L}V[AG]VV 5.9008;5.7058;5.6711;5.5022;5.418;5.3028;5.2305;5.223;5.1883;5.1767 -;+;-;-;-;-;-;-;-;- + 24306 1 1.339 154417.7 1.0 7733 4767 12494 HBL1_DMSO_200M_050219_2,12502 HBL1_DMSO_200M_050219_2,12502,VQFEDGQKIVV True True VQFEDGQKIVV 66.889636 631.342700183392 3194129.0 12494.0 ENST00000586541.5_2_17:66524793-66526587:+|nuORF;;ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 5.067253112792969 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12503 66.902 713.0 200360.0 25 0 25740.0 13710 HQLTEVGTMNI 11 158 621.8127407126346 0 621.8124877810478 PEAK CID FTMS 0 0 0 12494 206735.015625 1.0 0 0.0 9 Unmodified _HQLTEVGTMNI_ ENSG00000105552|ENST00000316273|BCAT2;ENST00000599510.1_1_19:49299609-49300643:-|nuORF;nc|ENSG00000105552|O15382-2|BCAT2 93.93812099017352 9.681287129648474e-10 4 DMTGVEPHN 9 8 59.596 0.0 0.0 4.7999 0.0 0.0 130.1079510524192 128.07212244205314 258.1800734944724 0.0 0.0 0.0 0.0 0 0.3633643341304672 0.0 2.0356668758921828 0.4247425010840047 DMTGVEPHN 4.7999 - 1003 + 1 1.339 109354.1 1.0 7734 4767 12494 HBL1_DMSO_200M_050219_2,12503 HBL1_DMSO_200M_050219_2,12503,HQLTEVGTMNI True True HQITEVGTMNL 66.902013 621.812487781048 1648253.25 12494.0 nc|ENSG00000060982|P54687-2|BCAT1;;nc|ENSG00000060982|P54687-4|BCAT1;;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;;nc|ENSG00000060982|P54687-5|BCAT1;;nc|ENSG00000060982|P54687-3|BCAT1;;ENSG00000060982|ENST00000261192|BCAT1 7.621707757314046 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12504 66.908 321.0 497520.0 25 0 28649.0 + 11495 DPYMMGRI 8 151 491.2843819508049 980.5542109684098 2 491.2842285037041 MULTI CID FTMS 0 0 0 12494 184345.890625 0.4883280682151373 8 -0.7598419189453125 10 Unmodified _GILEKIPPD_ nc|ENSG00000086475|P49903-4|SEPHS1;ENSG00000179918|ENST00000478753|SEPHS2;ENST00000443084.1_1_2:200524349-200524604:+|nuORF;nc|ENSG00000086475|P49903-3|SEPHS1;nc|ENSG00000086475|P49903-2|SEPHS1;ENSG00000086475|ENST00000327347|SEPHS1 20.453626601364224 0.2830276176381075 4 {[VA]|[{I|L}G]}P 3 6 28.574 0.0 0.0 2.914 0.0 0.0 0.0 710.3734263765779 710.3734263765779 8.686697522102143 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 {[VA]|[{I|L}G]}P 2.914 - 791 + 1 1.339 122857.2 1.0 7735 4767 12494 HBL1_DMSO_200M_050219_2,12504 HBL1_DMSO_200M_050219_2,12504,GILEKIPPD False False DPYMMGRI 66.907845 491.284228503704 764423.625 12494.0 nc|ENSG00000086475|P49903-4|SEPHS1;;ENSG00000179918|ENST00000478753|SEPHS2;;ENST00000443084.1_1_2:200524349-200524604:+|nuORF;;nc|ENSG00000086475|P49903-3|SEPHS1;;nc|ENSG00000086475|P49903-2|SEPHS1;;ENSG00000086475|ENST00000327347|SEPHS1 3.030341148376465 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12505 66.923 800.0 289960.0 25 0 44383.0 211 AARSDFAG 8 184 397.69312384986137 793.3716947665228 2 397.6930114626884 MULTI CID FTMS 0 0 0 12494 177533.078125 0.7106054424861753 -2 0.14288330078125 11 Unmodified _AARSDFAG_ ENST00000562752.5_1_16:784157-784744:-|nuORF 5.230669730166228 0.792582437072536 4 V{I|L} 2 8 18.315 0.0 0.0 2.3086 0.0 0.0 563.2081490895681 0.0 563.2081490895681 0.0 2.587374469548145 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{I|L} 2.3086 - 129 + 1 1.339 179611.6 0.7599999904632568 7736 4767 12494 HBL1_DMSO_200M_050219_2,12505 HBL1_DMSO_200M_050219_2,12505,AARSDFAG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12506 66.937 800.0 404580.0 25 0 16636.0 27037 PEPYRFHPEL 10 196 642.819826352426 1283.625099771652 2 642.8197509646416 MULTI CID FTMS 0 0 0 12494 161129.234375 0.2204165087113531 -2 0.14288330078125 12 Unmodified _PEPYRFHPEL_ ENSG00000148841|ENST00000337478|ITPRIP 37.97399986684836 0.1789611706409123 4 [EP]SANVETV 9 8 66.614 0.0 0.0 5.1895 0.0 0.0 0.0 354.1674862053699 354.1674862053699 37.89381281052492 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.1906140654642814 1.642159058960253 [EP]SANVETV 5.1895 - 12657 1 1.339 236385.0 0.8500000238418579 7737 4767 12494 HBL1_DMSO_200M_050219_2,12506 HBL1_DMSO_200M_050219_2,12506,PEPYRFHPEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12507 66.95 800.0 208240.0 25 0 15081.0 -1 0 177 465.2598474876348 464.2525710210348 1 466.2635681033134 MULTI CID FTMS 0 0 0 12494 159360.859375 1.0 0 0.0 13 4 S{I|L} 2 -1 17.633 0.0 0.0 3.7981 0.0 0.0 246.1254785911504 0.0 246.1254785911504 0.0 3.6535656654828585 0.0 0.0 0 0.0 0.0 0.2059771852360797 0.0 S{I|L} 3.7981 - 103 + 1 1.339 127758.1 0.7799999713897705 7738 4767 12494 HBL1_DMSO_200M_050219_2,12507 HBL1_DMSO_200M_050219_2,12507, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12509 66.955 9.3 8197900.0 25 0 1005800.0 + 19879 LHPPLLLR 8 66 320.2117583217455 957.6134455654365 3 320.2113525271416 MULTI CID FTMS 0 0 0 12508 6293111.5 0.8306634788832005 -2 0.1560516357421875 1 Unmodified _LHPPLLLR_ REV__ENST00000559694.5_1_14:24526437-24530034:+|nuORF 19.256988751693697 0.6264283240490721 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 -1 + 65.126 0.0 0.0 6.8008 6.8008 80.733 0.0 0.0 0.0 49.71971276399756 5.484550065040281 5.484550065040281 3.0102999566398125 0 0.0 1.6989700043360187 0.0 0.0 {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 6.8008;6.4865;6.1721;4.0836 -;-;-;- 134 + 1 1.341 66860.2 1.0 7739 4768 12508 HBL1_DMSO_200M_050219_2,12509 HBL1_DMSO_200M_050219_2,12509,LHPPLLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12510 66.956 13.0 5088300.0 25 0 941080.0 + 41249 KVGPVPVL 8 69 404.7684194017362 807.5222858702724 2 404.7682372927666 MULTI CID FTMS 0 0 0 12508 5413886.0 0.9247546611289538 -1 0.1124420166015625 2 Unmodified _VPGKVVPL_ ENSG00000106803|ENST00000223641|SEC61B 42.96799951952854 0.1846367511955703 4 [VP]KVGPV{I|L} 8 3 + 74.135 0.0 0.0 9.1805 9.1805 82.084 0.0 0.0 0.0 22.21848749616356 67.14509699961575 22.21848749616356 1.249387366082999 0 1.424742501084005 1.5228787452803376 0.0 0.3054621874040891 [VP]KVGPV{I|L};[VP]KGVPV{I|L};[VP]GKVPV{I|L};[VP]GVKPV{I|L};[VP]GVPKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PVGPV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PGVPV{I|L} 9.1805;9.0258;8.653;8.653;7.0647;6.2481;6.0934 -;-;-;-;-;-;- 289 1 1.341 54477.7 1.0 7740 4768 12508 HBL1_DMSO_200M_050219_2,12510 HBL1_DMSO_200M_050219_2,12510,VPGKVVPL False False KVGPVPVL 66.956075 404.768237292767 56903980.0 12508.0 ENSG00000106803|ENST00000223641|SEC61B 5.720067818959554 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12511 66.957 23.0 2189200.0 25 0 185700.0 + 13910 HVVEILVET 9 82 519.7947846534107 1037.575016373621 2 519.7946044802666 MULTI CID FTMS 0 0 0 12508 1963379.25 0.1440745293074127 -3 0.2553253173828125 3 Unmodified _HVVEILVET_ ENSG00000170779|ENST00000336219|CDCA4 34.10243960390752 0.1078313939113124 4 VVHE{I|L}{I|L}VET 9 2 + 57.553 0.0 0.0 5.5469 5.5469 79.961 0.0 0.0 0.0 10.563025007672875 7.1919646325935815 7.1919646325935815 6.020599913279625 0 0.7429928190999391 2.0 0.0 0.0 VVHE{I|L}{I|L}VET;VVHE{I|L}V{I|L}ET;[HV]VE{I|L}{I|L}VET;[HV]VE{I|L}V{I|L}ET;{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}{I|L}VET;VVH[{I|L}T]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV];{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}V{I|L}ET;[HV]V[{I|L}T]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV];[KT][KA]YVVET 5.5469;4.9666;4.5289;3.9486;1.5441;1.4642;0.96384;0.44611;0.38358 -;-;+;-;-;-;-;-;- + 171 1 1.341 42249.7 1.0 7741 4768 12508 HBL1_DMSO_200M_050219_2,12511 HBL1_DMSO_200M_050219_2,12511,HVVEILVET True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12512 66.958 30.0 2639900.0 25 0 501550.0 + 41852 VPYLFKKV 8 79 331.8761254145025 992.6065468437076 3 331.8757507205009 MULTI CID FTMS 0 0 0 12508 1809901.625 0.9240944690322812 -1 0.1124420166015625 4 Unmodified _VPYLFKKV_ ENSG00000100395|ENST00000216237|L3MBTL2;ENST00000466589.5_1_22:41601366-41623356:+|nuORF;ENST00000479978.5_1_22:41615341-41623356:+|nuORF;nc|ENSG00000100395|Q969R5-2|L3MBTL2;nc|ENSG00000100395|Q969R5-3|L3MBTL2 34.10243960390752 0.3329570729325616 4 VPY{I|L}{M(Oxidation (M))|F}KKV 8 0 + 57.381 0.0 0.0 5.7808 5.7808 89.247 0.0 0.0 0.0 30.21397942534385 15.477372199242296 15.477372199242296 29.48329514953265 0 0.4247425010840047 0.8538719643217619 0.0 0.2302046884880938 + + VPY{I|L}{M(Oxidation (M))|F}KKV;V[{I|L}T]Y{I|L}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{I|L}Y[VP]V;KK{M(Oxidation (M))|F}{I|L}Y[VP]V;[Y{I|L}]{M(Oxidation (M))|F}KK[VP]V 5.7808;2.8105;1.6958;1.3925;1.1477 +;-;-;-;- + 134 + 1 1.341 67647.5 1.0 7742 4768 12508 HBL1_DMSO_200M_050219_2,12512 HBL1_DMSO_200M_050219_2,12512,VPYLFKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12513 66.96 30.0 3083600.0 25 0 278770.0 + 21914 LPPHIIRL 8 87 479.8140515051801 957.6135500771602 2 479.8135864138603 MULTI CID FTMS 0 0 0 12508 1384268.5 0.6286977795808457 -14 1.2228012084960938 5 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 36.12702656103203 0.299085846329477 4 {I|L}PPH{I|L}{I|L}R{I|L} 8 0 + 68.301 0.0 0.0 7.1324 7.1324 95.346 0.0 0.0 0.0 53.60837559620258 13.399480616943508 13.399480616943508 68.30111320076661 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + + {I|L}PPH{I|L}{I|L}R{I|L} 7.1324 + + 239 + 1 1.341 73810.4 1.0 7743 4768 12508 HBL1_DMSO_200M_050219_2,12513 HBL1_DMSO_200M_050219_2,12513,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12514 66.961 44.0 1426500.0 25 0 298960.0 + 36333 SYNDYVREF 9 63 596.7674559281261 1191.520358923052 2 596.7673828005791 MULTI CID FTMS 0 0 0 12508 1310361.25 0.55680850143907 1 -0.066497802734375 6 Unmodified _SYNDYVREF_ ENSG00000083896|ENST00000344157|YTHDC1;nc|ENSG00000083896|Q96MU7-2|YTHDC1 34.93206674587334 0.1032771302489716 4 {[{M(Oxidation (M))|F}C]|[YS]}NDYV{[RE]|[WV]}{M(Oxidation (M))|F} 9 0 + 49.983 0.0 0.0 4.1949 4.1949 78.322 0.0 0.0 0.0 37.21853159358357 8.824091325304835 8.824091325304835 9.208187539523747 0 0.8494850021680094 0.0 0.0 0.805462187404089 + + {[{M(Oxidation (M))|F}C]|[YS]}NDYV{[RE]|[WV]}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}GGDYV{[RE]|[WV]}{M(Oxidation (M))|F} 4.1949;3.4221 +;- + 67 + 1 1.341 53391.0 1.0 7744 4768 12508 HBL1_DMSO_200M_050219_2,12514 HBL1_DMSO_200M_050219_2,12514,SYNDYVREF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12515 66.962 28.0 1312200.0 25 0 90083.0 + 4594 DAYTHLETF 9 77 548.7500531397501 1095.4855533463 2 548.7518798708916 MULTI CID FTMS 0 0 0 12508 1140393.25 0.513162350202078 2 -0.2143478393554687 7 Unmodified _DAYTHLETF_ ENSG00000115267|ENST00000649979|IFIH1 20.453626601364224 0.2830276176381075 4 PEYGET{M(Oxidation (M))|F} 7 5 27.127 0.0 0.0 2.4763 0.0 0.0 254.1381855695328 0.0 254.1381855695328 0.0 13.147897859064273 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.0 PEYGET{M(Oxidation (M))|F} 2.4763 - 161 1 1.341 36645.8 1.0 7745 4768 12508 HBL1_DMSO_200M_050219_2,12515 HBL1_DMSO_200M_050219_2,12515,DAYTHLETF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12516 66.963 40.0 1250000.0 25 0 159750.0 + 24439 MGYKTIMV 8 85 471.74300470515175 941.4714564771036 2 471.7431213259697 MULTI CID FTMS 0 0 0 12508 1089503.125 0.3308593732502862 3 -0.2530975341796875 8 Unmodified _MGYKTIMV_ ENSG00000084774|ENST00000264705|CAD 36.04419817259434 0.3004715606373109 4 [{M(Oxidation (M))|F}T]M{I|L}GTYG 8 7 27.151 0.0 0.0 2.8839 0.0 0.0 0.0 68.05137811832265 68.05137811832265 11.666856648494251 0.0 0.0 0.0 0 0.5 0.0 1.0114393726401687 0.0 [{M(Oxidation (M))|F}T]M{I|L}GTYG 2.8839 - 183 + 1 1.341 44806.1 1.0 7746 4768 12508 HBL1_DMSO_200M_050219_2,12516 HBL1_DMSO_200M_050219_2,12516,MGYKTIMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12517 66.965 79.0 1160600.0 25 0 105390.0 + 41853 VPYLFKKV 8 106 497.3111393215535 992.6077257099072 2 497.3108398318291 MULTI CID FTMS 0 0 0 12508 784821.0 1.0 0 0.0 9 Unmodified _VPYLFKKV_ ENSG00000100395|ENST00000216237|L3MBTL2;ENST00000466589.5_1_22:41601366-41623356:+|nuORF;ENST00000479978.5_1_22:41615341-41623356:+|nuORF;nc|ENSG00000100395|Q969R5-2|L3MBTL2;nc|ENSG00000100395|Q969R5-3|L3MBTL2 44.40701690623563 0.1655546087385432 4 VPY{I|L}{M(Oxidation (M))|F}KKV 8 0 + 73.085 0.0 0.0 7.3629 7.3629 88.169 0.0 0.0 0.0 31.638568026386693 7.596678446896306 7.596678446896306 7.596678446896306 0 0.6989700043360187 1.5228787452803376 0.0 0.0 + + VPY{I|L}{M(Oxidation (M))|F}KKV;VPY{I|L}{M(Oxidation (M))|F}KVK;VPY{I|L}KK{M(Oxidation (M))|F}V;V[{I|L}T]YKKNK 7.3629;6.5976;5.9332;0.18461 +;-;-;- + 316 + 1 1.341 75034.2 1.0 7747 4768 12508 HBL1_DMSO_200M_050219_2,12517 HBL1_DMSO_200M_050219_2,12517,VPYLFKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12518 66.966 58.0 791070.0 25 0 76991.0 29952 QSPQELFEI 9 84 545.7743488765456 1089.534144819891 2 545.7744018435478 MULTI CID FTMS 0 0 0 12508 730605.375 0.8184503119751739 -8 0.734405517578125 10 Unmodified _QSPQELFEI_ ENSG00000143473|ENST00000271751|KCNH1;nc|ENSG00000143473|O95259-2|KCNH1 18.1463463914782 0.3454829746528889 4 [NP]QTEE 6 6 33.377 0.0 0.0 3.0634 0.0 0.0 0.0 388.2202159470973 388.2202159470973 10.625300860081577 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.4247425010840047 [NP]QTEE 3.0634 - 129 1 1.341 38902.1 1.0 7748 4768 12508 HBL1_DMSO_200M_050219_2,12518 HBL1_DMSO_200M_050219_2,12518,QSPQELFEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12519 66.969 94.0 653370.0 25 0 47829.0 + 29633 QMISRIEYV 9 95 569.8024495370894 1137.590346140979 2 569.8001586794853 MULTI CID FTMS 0 0 0 12508 533137.5625 0.5562323650618926 -6 0.4962692260742187 11 Unmodified _QMISRIEYV_ ENSG00000113712|ENST00000377843|CSNK1A1;ENSG00000180138|ENST00000379800|CSNK1A1L;nc|ENSG00000113712|P48729-2|CSNK1A1;nc|ENSG00000113712|P48729-3|CSNK1A1 78.7280429016045 0.0178249292250809 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YV 9 4 + 67.106 0.0 0.0 5.8989 5.8989 83.702 0.0 0.0 0.0 23.613555222196112 55.339862491657854 23.613555222196112 8.494850021680094 0 1.805462187404089 1.2218487496163564 0.0 1.6989700043360187 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[EP]{I|L}T[HA]V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}[EP]T[HA]V;{[QN]|[E{I|L}]|[KN]}RS{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YV;{[VA]|[{I|L}G]}{[DS]|[MA]|[CV]|TT}{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YV;{[QN]|[E{I|L}]|[KN]}RS{I|L}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;[QA][KA]S{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YV;{[VA]|[{I|L}G]}{[DS]|[MA]|[CV]|TT}{I|L}{I|L}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;{[QN]|[E{I|L}]|[KN]}R[NG][C(Carbamidomethyl (C))K]YV 5.8989;5.1522;4.3276;4.3276;3.6513;3.4801;2.5699;2.5509;2.3987;2.1129 -;-;-;-;-;-;-;-;-;- 276 1 1.341 53299.0 1.0 7749 4768 12508 HBL1_DMSO_200M_050219_2,12519 HBL1_DMSO_200M_050219_2,12519,QMISRIEYV True True QMISRIEYV 66.96854 569.800158679485 4399206.5 12508.0 nc|ENSG00000113712|P48729-3|CSNK1A1;;ENSG00000113712|ENST00000377843|CSNK1A1;;ENSG00000180138|ENST00000379800|CSNK1A1L;;nc|ENSG00000113712|P48729-2|CSNK1A1 7.53211243947347 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12520 66.978 531.0 528760.0 25 0 43753.0 + 35472 STLTEEGVIKV 11 214 588.3296523133326 1174.6447516934652 2 588.3299438357353 MULTI CID FTMS 0 0 0 12508 410726.78125 0.9887931445015848 -1 0.1124420166015625 12 Unmodified _STLTEEGVIKV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 80.6760300276096 0.0071538679453211 4 {[MG]|[TS]}{I|L}TEER{I|L}KV 10 2 + 74.835 0.0 0.0 6.3709 6.3709 74.63 0.0 0.0 0.0 7.269987279362638 0.6656697235119253 0.6656697235119253 0.6656697235119253 0 1.2614393726401687 0.0 1.208170666312956 0.2215141619232908 {[MG]|[TS]}{I|L}TEER{I|L}KV;{[MG]|[TS]}{I|L}TEERVK{I|L};{[MG]|[TS]}{I|L}TEER{I|L}VK;{[MG]|[TS]}{I|L}TEERV{I|L}K;{[MG]|[TS]}{I|L}TEE[VG]{I|L}KV;{[MG]|[TS]}{I|L}TEE[VG]VK{I|L};{[MG]|[TS]}{I|L}TEE[VG]{I|L}VK;{[MG]|[TS]}{I|L}TEE[VG]V{I|L}K;{[MG]|[TS]}{I|L}TE[K{I|L}]TSVP;{[MG]|[TS]}{I|L}TE[KT]{I|L}SVP 6.3709;6.3142;6.2919;5.8291;5.5907;5.534;5.5117;5.0489;4.6419;4.3857 -;-;-;-;+;-;-;-;-;- + 8932 + 1 1.341 203705.6 1.0 7750 4768 12508 HBL1_DMSO_200M_050219_2,12520 HBL1_DMSO_200M_050219_2,12520,STLTEEGVIKV True True STLTEEGVIKV 66.977894 588.329943835735 4563829.0 12508.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 7.290131568908691 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12521 66.981 150.0 400100.0 25 0 44950.0 + 19116 LDVGSVEL 8 96 416.2266827569277 830.4388125806554 2 416.2264892458916 MULTI CID FTMS 0 0 0 12508 408915.5 0.0624601953544603 5 -0.4891128540039062 13 Unmodified _LDVGSVEL_ REV__ENSG00000132849|ENST00000642238|PATJ;REV__ENST00000459752.5_1_1:62228564-62579919:+|nuORF;REV__ENST00000484562.5_1_1:62228564-62579919:+|nuORF;REV__nc|ENSG00000132849|Q8NI35-2|PATJ;REV__nc|ENSG00000132849|Q8NI35-3|PATJ;REV__nc|ENSG00000132849|Q8NI35-4|PATJ;REV__nc|ENSG00000132849|Q8NI35-5|PATJ;REV__nc|ENSG00000132849|Q8NI35|PATJ 24.67388899826682 0.525179942228231 4 DD{I|L}KVE{I|L} 7 -1 + 45.723 0.0 0.0 5.5059 5.5059 87.882 0.0 0.0 0.0 20.74076497314074 10.189097685623524 10.189097685623524 25.56302500767287 0 0.9291746928241126 1.6989700043360187 0.4247425010840047 0.0 DD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}KVDE{I|L};[K{I|L}]VDDE{I|L};[K{I|L}]DVDE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DDE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EVDE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[VG]SVE{I|L} 5.5059;2.4276;2.0438;1.4693;1.3188;0.74426;0.28052 -;-;-;-;-;-;+ + 182 + 1 1.341 53195.5 1.0 7751 4768 12508 HBL1_DMSO_200M_050219_2,12521 HBL1_DMSO_200M_050219_2,12521,LDVGSVEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12522 66.983 71.0 506630.0 25 0 43554.0 + -1 RTRLRCPL 8 70 536.3131780986218 1070.6118032640436 2 536.8166992068291 MULTI CID FTMS 0 0 0 12508 391694.5 0.3346652776908541 2 -0.2143478393554687 14 Carbamidomethyl (C) _RTRLRC(Carbamidomethyl (C))PL_ REV__ENSG00000125898|ENST00000381941|FAM110A 6.354104778181461 0.7857632046190106 4 [EP]K[Q{I|L}]{M(Oxidation (M))|F}V 7 -1 28.983 0.0 0.0 2.7072 0.0 0.0 0.0 226.13168602144663 226.13168602144663 11.024558200124272 0.0 0.0 0.0 0 0.2614393726401688 0.958607314841775 0.3807196863200844 0.0 [EP]K[Q{I|L}]{M(Oxidation (M))|F}V 2.7072 - 65 1 1.341 40004.5 1.0 7752 4768 12508 HBL1_DMSO_200M_050219_2,12522 HBL1_DMSO_200M_050219_2,12522,RTRLRCPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12523 66.985 139.0 504880.0 25 0 66825.0 + 23843 LVHDLFQKV 9 102 366.8811625274385 1097.6216581825156 3 366.8815490603447 MULTI CID FTMS 0 0 0 12508 368666.375 1.0 0 0.0 15 Unmodified _LVHDLFQKV_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 30.63653989081413 0.1413794767160703 4 [{I|L}V]HN 4 6 39.18 0.0 0.0 3.5695 0.0 0.0 0.0 631.3664644830686 631.3664644830686 17.856186612424388 0.0 0.0 0.0 0 0.5010912013506126 2.0 0.0 0.4247425010840047 [{I|L}V]HN 3.5695 - 296 + 1 1.341 63291.6 1.0 7753 4768 12508 HBL1_DMSO_200M_050219_2,12523 HBL1_DMSO_200M_050219_2,12523,LVHDLFQKV False True LVHDLFQKV 66.985365 366.881549060345 2230363.75 12508.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 5.891719500223796 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12524 66.99 244.0 548420.0 25 0 68286.0 + 33178 SFCSLFSSSH 10 142 551.2356070221051 1100.45666111101 2 551.2356445193291 MULTI CID FTMS 0 0 0 12508 330420.84375 0.6469553172660789 -1 0.1124420166015625 16 Unmodified _SFCSLFSSSH_ REV__HAL1_dup21739|chr20:4024584-4025416:+|1.0515913160234027|0.1385400223363406|2.92|48.0|56|3|anti-sense 32.30548876998284 0.2428506522065767 4 {[{M(Oxidation (M))|F}C]|[YS]}WTS{M(Oxidation (M))|F}SSH 9 -1 + 78.145 0.0 0.0 7.1011 7.1011 83.895 0.0 0.0 0.0 4.280423675965437 4.280423675965437 4.280423675965437 4.280423675965437 0 0.7302046884880937 0.0 1.923877368056628 0.0 {[{M(Oxidation (M))|F}C]|[YS]}WTS{M(Oxidation (M))|F}SSH;{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}STW[MT];{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}ST{[DA]|[EG]}[MT];{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}T]STW[MT];{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}E]STW[MT];{[{M(Oxidation (M))|F}C]|[YS]}WTSEETV;{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}T]ST{[DA]|[EG]}[MT];{[{M(Oxidation (M))|F}C]|[YS]}WHTRDH;{[WT]|[RM]}[{M(Oxidation (M))|F}E]TW[MT];{[{M(Oxidation (M))|F}C]|[YS]}[EP]STW[MT] 7.1011;6.7122;5.8754;4.4324;3.8045;3.675;3.5957;3.5486;3.5082;3.5032 -;-;-;-;-;-;-;-;-;- 1071 + 1 1.341 102339.0 1.0 7754 4768 12508 HBL1_DMSO_200M_050219_2,12524 HBL1_DMSO_200M_050219_2,12524,SFCSLFSSSH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12525 66.995 257.0 443100.0 25 0 55037.0 + 30816 RIIDVSTVKEL 11 102 636.8795820298486 1271.7446111264971 2 636.8798095583916 MULTI CID FTMS 0 0 0 12508 298477.375 0.8561002573694111 -1 0.1124420166015625 17 Unmodified _RIIDVSTVKEL_ ENSG00000076043|ENST00000265881|REXO2;ENST00000538403.5_1_11:114314877-114320694:+|nuORF;ENST00000538791.3_1_11:114315223-114320694:+|nuORF;ENST00000539333.5_1_11:114316741-114316810:+|nuORF;ENST00000539788.5_1_11:114314891-114320694:+|nuORF;ENST00000543131.5_1_11:114310234-114320694:+|nuORF;nc|ENSG00000076043|Q9Y3B8-2|REXO2;nc|ENSG00000076043|Q9Y3B8-3|REXO2 50.13029200064056 0.116908488078412 4 {[QN]|[E{I|L}]|[KN]}[RV]VSTVKE{I|L} 11 3 + 81.661 0.0 0.0 6.4212 6.4212 84.511 0.0 0.0 0.0 4.5152283674466815 47.99634261276823 4.5152283674466815 6.989700043360188 0 1.5044321917401078 0.0 1.4634679910804405 0.0 {[QN]|[E{I|L}]|[KN]}[RV]VSTVKE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RN]VSTVKE{I|L};[K{I|L}]QQVSTVKE{I|L};{[QN]|[E{I|L}]|[KN]}[RV]{[WT]|[RM]}VKE{I|L};{I|L}{M(Oxidation (M))|F}KVT{[VA]|[{I|L}G]}[HM]VK;{[QN]|[E{I|L}]|[KN]}[RV]VSTE{I|L}KV;{[QN]|[E{I|L}]|[KN]}[RV]VSTV[RD]V;{[QV]|[N{I|L}]|[RA]|[KV]}[RN]{[WT]|[RM]}VKE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[RN]{[VA]|[{I|L}G]}TVKE{I|L};[K{I|L}]QQ{[WT]|[RM]}VKE{I|L} 6.4212;5.8716;5.7566;4.6474;4.4971;4.2654;4.1213;4.0977;3.9859;3.9828 -;-;-;-;-;-;-;-;-;- 1342 1 1.341 92267.9 1.0 7755 4768 12508 HBL1_DMSO_200M_050219_2,12525 HBL1_DMSO_200M_050219_2,12525,RIIDVSTVKEL True True RIIDVSTVKEL 66.994717 636.879809558392 2887329.25 12508.0 nc|ENSG00000076043|Q9Y3B8-2|REXO2;;ENST00000539788.5_1_11:114314891-114320694:+|nuORF;;nc|ENSG00000076043|Q9Y3B8-3|REXO2;;ENST00000538403.5_1_11:114314877-114320694:+|nuORF;;ENST00000543131.5_1_11:114310234-114320694:+|nuORF;;ENST00000539333.5_1_11:114316741-114316810:+|nuORF;;ENSG00000076043|ENST00000265881|REXO2;;ENST00000538791.3_1_11:114315223-114320694:+|nuORF 6.392141501108806 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12526 67.0 290.0 438790.0 25 0 87676.0 + 5862 DPWRIRQI 8 132 361.8737816634367 1082.59951559051 3 361.8735839724541 MULTI CID FTMS 0 0 0 12508 237174.953125 1.0 0 0.0 18 Unmodified _DPWRIRQI_ ENSG00000164941|ENST00000523731|INTS8;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8 23.1484247019978 0.5573009939494978 4 DPWR{I|L}A 6 3 54.346 0.0 0.0 5.02 0.0 0.0 0.0 341.18772302799067 341.18772302799067 43.96763416812117 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.4247425010840047 DPWR{I|L}A 5.02 - 272 + 1 1.341 107316.2 1.0 7756 4768 12508 HBL1_DMSO_200M_050219_2,12526 HBL1_DMSO_200M_050219_2,12526,DPWRIRQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12527 67.002 90.0 367540.0 25 0 39184.0 40618 VLCDKDQPSI 10 76 559.2801899791613 1116.5458270251224 2 559.2805053591728 MULTI CID FTMS 0 0 0 12508 243394.296875 0.737639923120299 1 -0.066497802734375 19 Unmodified _VLCDKDQPSI_ ENSG00000188352|ENST00000338382|FOCAD 19.256988751693697 0.5244284437930726 4 [{I|L}V]{M(Oxidation (M))|F} 3 8 21.171 0.0 0.0 1.8961 0.0 0.0 0.0 754.3378857011568 754.3378857011568 8.071968632008435 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}V]{M(Oxidation (M))|F} 1.8961 - 84 1 1.341 36460.6 1.0 7757 4768 12508 HBL1_DMSO_200M_050219_2,12527 HBL1_DMSO_200M_050219_2,12527,VLCDKDQPSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12528 67.017 800.0 131670.0 25 0 6971.8 + 16308 IWYMMWRVYER 11 124 816.8933629704867 1631.7721730077733 2 817.3959838747978 MULTI CID FTMS 0 0 0 12508 194801.71875 0.9556605825145674 -2 0.1560516357421875 20 Unmodified _IWYMMWRVYER_ REV__ENSG00000168476|ENST00000306306|REEP4;REV__ENST00000519074.5_1_8:21996670-21998995:-|nuORF;REV__ENST00000519875.1_1_8:21997686-21998995:-|nuORF;REV__nc|ENSG00000168476|Q9H6H4-2|REEP4 0.9622753412299312 0.8706078577147922 4 MPN{I|L}NEA[RH][Y{M(Oxidation (M))|F}]{I|L}Q 13 -1 + 103.69 0.0 0.0 6.3544 6.3544 77.841 0.0 0.0 0.0 66.12588477037039 10.204425245238111 10.204425245238111 2.43038048686293 0 2.055462187404089 1.5228787452803376 0.0 1.0451140161145327 MPN{I|L}NEA[RH][Y{M(Oxidation (M))|F}]{I|L}Q;MPN{I|L}NE[HV]K[Y{M(Oxidation (M))|F}]{I|L}Q;MPN{I|L}NEA[RH][H{I|L}][WD];MPN{I|L}NE[HV]K[H{I|L}][WD];{NN|[MP]|[D{I|L}]|[EV]}N[HV]RQAE[Y{M(Oxidation (M))|F}]{I|L}Q;[NP]M[HV]RQAE[Y{M(Oxidation (M))|F}]{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}N[HV]RQAEN[PA]A[TP];[NP]M[HV]RQAEN[PA]A[TP];{NN|[MP]|[D{I|L}]|[EV]}N[HV]RE{[CA]|SS}G{M(Oxidation (M))|F}M{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}N[HV]RE{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}M{I|L}Q 6.3544;6.2054;4.0606;3.9117;3.3888;3.1903;3.0442;2.8457;2.7948;2.7552 -;-;-;-;-;-;-;-;-;- 5746 + 1 1.341 76484.7 0.9800000190734864 7758 4768 12508 HBL1_DMSO_200M_050219_2,12528 HBL1_DMSO_200M_050219_2,12528,IWYMMWRVYER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12530 67.021 5.4 11330000.0 25 0 1655000.0 + 3632 DADYAIKI 8 72 454.7399449691237 907.4653370050474 2 454.7400390505791 MULTI CID FTMS 0 0 0 12529 11120930.0 1.0 0 0.0 1 Unmodified _DADYAIKI_ ENSG00000143368|ENST00000271628|SF3B4;ENST00000553618.1_1_14:67665960-67666731:+|nuORF 61.357469665136826 0.1155423183535659 4 {[DA]|[EG]}DYA{I|L}K{I|L} 8 0 + 79.122 0.0 0.0 8.719 8.719 83.651 0.0 0.0 0.0 22.76420984328891 2.340832060333682 2.340832060333682 2.340832060333682 0 1.6549471895720984 2.0 0.0 0.2887254899964357 + + {[DA]|[EG]}DYA{I|L}K{I|L};{[DA]|[EG]}DYA{I|L}{I|L}K 8.719;8.461 +;- + 108 + 1 1.341 54110.5 1.0 7759 4769 12529 HBL1_DMSO_200M_050219_2,12530 HBL1_DMSO_200M_050219_2,12530,DADYAIKI True True DADYAIKI 67.021394 454.740039050579 240058152.0 12529.0 ENSG00000143368|ENST00000271628|SF3B4;;ENST00000553618.1_1_14:67665960-67666731:+|nuORF 5.836469332377116 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12531 67.023 17.0 2773400.0 25 0 360350.0 + 45098 YPYPYPHTL 9 69 575.7824481621841 1149.550343391168 2 575.7819702029228 MULTI CID FTMS 0 0 0 12529 2274524.75 0.6774089694136575 -1 0.066497802734375 2 Unmodified _YPYPYPHTL_ ENSG00000116221|ENST00000360840|MRPL37 81.86404211737425 0.017065112157077 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPHT{I|L} 9 0 + 73.139 0.0 0.0 6.3624 6.3624 88.047 0.0 0.0 0.0 27.147642715192504 9.47621246364342 9.47621246364342 9.47621246364342 0 1.5044321917401078 2.0 1.274227503252014 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPHT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPY[TA]{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPY[TA]Y{I|L} 6.3624;5.538;4.9698 +;-;- + 212 + 1 1.341 42703.2 1.0 7760 4769 12529 HBL1_DMSO_200M_050219_2,12531 HBL1_DMSO_200M_050219_2,12531,YPYPYPHTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12532 67.024 21.0 3208700.0 25 0 299740.0 + 2967 AVIDVGINRV 10 82 528.3139463310985 1054.6133397289968 2 528.3143188357353 MULTI CID FTMS 0 0 0 12529 1886620.25 0.0724125347646291 -3 0.2225494384765625 3 Unmodified _AVIDVGINRV_ ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2 43.77239144664712 0.1177314611616471 4 {[VA]|[{I|L}G]}{I|L}DVG{I|L}N[RV] 10 0 + 71.93 0.0 0.0 6.8205 6.8205 80.326 0.0 0.0 0.0 43.51342204748164 2.7545373444029053 2.7545373444029053 2.959252469304303 0 1.25 2.0 0.0 0.3054621874040891 + + {[VA]|[{I|L}G]}{I|L}DVG{I|L}N[RV];{[VA]|[{I|L}G]}{I|L}DR[KG]PS{I|L};{[VA]|[{I|L}G]}{I|L}DVVAN[RV];{[VA]|[{I|L}G]}{I|L}DVG[RN]V{I|L};{[VA]|[{I|L}G]}{I|L}DVV{NN|[MP]|[D{I|L}]|[EV]}V{I|L};{[VA]|[{I|L}G]}{I|L}DVG{I|L}GG[RV];{[VA]|[{I|L}G]}{I|L}VDG{I|L}N[RV];{[VA]|[{I|L}G]}{I|L}DVVAGG[RV];{[VA]|[{I|L}G]}{I|L}VDVAN[RV];{[VA]|[{I|L}G]}{I|L}VDG[RN]V{I|L} 6.8205;6.5399;6.535;6.272;5.9865;5.9515;5.894;5.6661;5.6085;5.3455 +;-;-;-;-;-;-;-;-;- + 423 + 1 1.341 59644.9 1.0 7761 4769 12529 HBL1_DMSO_200M_050219_2,12532 HBL1_DMSO_200M_050219_2,12532,AVIDVGINRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12533 67.026 86.0 901890.0 25 0 139500.0 + 43841 YFHEALRAF 9 96 385.197929781853 1152.571959945759 3 385.1975585818291 MULTI CID FTMS 0 0 0 12529 598121.5 1.0 0 0.0 4 Unmodified _YFHEALRAF_ ENSG00000132604|ENST00000254942|TERF2;nc|ENSG00000132604|Q15554-4|TERF2;TERF2|p.W465Yfs*7|1|0.07|ENSG00000132604|chr16:69361436-69361437|-/AAGT|frameshift_variant 26.020703789607367 0.2001090068861241 4 Y{M(Oxidation (M))|F}HEA{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F} 9 0 + 54.971 0.0 0.0 4.7694 4.7694 85.801 0.0 0.0 0.0 25.22160958700539 4.577118610328341 4.577118610328341 54.97093142085326 0 0.3494850021680094 0.0 0.4247425010840047 0.2614393726401688 + + Y{M(Oxidation (M))|F}HEA{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F} 4.7694 + + 74 + 1 1.341 66890.5 1.0 7762 4769 12529 HBL1_DMSO_200M_050219_2,12533 HBL1_DMSO_200M_050219_2,12533,YFHEALRAF False True YFHEALRAF 67.025671 385.197558581829 4520321.0 12529.0 TERF2|p.W465Yfs*7|1|0.07|ENSG00000132604|chr16:69361436-69361437|-/AAGT|frameshift_variant;;nc|ENSG00000132604|Q15554-4|TERF2;;ENSG00000132604|ENST00000254942|TERF2 4.4028992255528765 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12534 67.027 55.0 869380.0 25 0 96412.0 + 41354 VPKALEPYV 9 89 508.2958858558062 1014.5772187784124 2 508.2953674197197 MULTI CID FTMS 0 0 0 12529 541124.1875 0.1149432351091598 -3 0.2225494384765625 5 Unmodified _VPKALEPYV_ ENSG00000183434|ENST00000310125|TFDP3;ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1 32.78568957990786 0.1150597335874693 4 [VP][WR]VPYV 8 4 + 44.006 0.0 0.0 4.3374 4.3374 69.015 0.0 0.0 0.0 5.474469367710739 30.02706335427355 5.474469367710739 1.989700043360188 0 1.2614393726401687 1.154901959985743 0.0 0.0 [VP][WR]VPYV;[VP][WR]PVYV;[VP][KA]{I|L}EPYV;{[QN]|[E{I|L}]|[KN]}A[KP]VPYV;{[QN]|[E{I|L}]|[KN]}A[KP]PVYV;[{I|L}A]E[KP]VPYV;[{I|L}A]E[KP]PVYV;[KP]{[VA]|[{I|L}G]}{I|L}EPYV;{[QN]|[E{I|L}]|[KN]}[HK]KVYV;[VP][WR]{M(Oxidation (M))|F}[{I|L}V]V 4.3374;4.1413;3.6936;3.5913;3.3952;3.1991;3.003;2.7288;2.5172;2.0411 -;-;+;-;-;-;-;-;-;- + 200 1 1.341 42971.4 1.0 7763 4769 12529 HBL1_DMSO_200M_050219_2,12534 HBL1_DMSO_200M_050219_2,12534,VPKALEPYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12535 67.029 105.0 1065800.0 25 0 111320.0 + 21384 LPFTMKKI 8 107 326.53346745900274 976.5785729772084 3 326.5329772830009 MULTI CID FTMS 0 0 0 12529 472162.59375 1.0 0 0.0 6 Unmodified _LPFTMKKI_ ENSG00000122376|ENST00000298786|SHLD2;ENST00000497389.6_1_10:46918355-46938364:+|nuORF;nc|ENSG00000122376|Q86V20|SHLD2 27.628801355627647 0.4629596117395134 4 {I|L}{I|L}MTMKK{I|L} 8 2 + 51.056 0.0 0.0 5.228 5.228 72.628 0.0 0.0 0.0 30.0202495894991 10.929862658764264 10.929862658764264 2.0289375146764854 0 0.4247425010840047 0.0 0.8494850021680094 0.0 {I|L}{I|L}MTMKK{I|L};{I|L}P{M(Oxidation (M))|F}TMKK{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KT{M(Oxidation (M))|F}P{I|L}{I|L};KKMT{M(Oxidation (M))|F}P{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TK{M(Oxidation (M))|F}P{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KT{M(Oxidation (M))|F}{I|L}P{I|L};KKMT{M(Oxidation (M))|F}{I|L}P{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TK{M(Oxidation (M))|F}{I|L}P{I|L};{I|L}{I|L}[YV]K[WR] 5.228;5.0203;2.7725;2.6607;2.5715;2.4642;2.3525;2.2632;1.9028 -;+;-;-;-;-;-;-;- + 180 + 1 1.341 96229.9 1.0 7764 4769 12529 HBL1_DMSO_200M_050219_2,12535 HBL1_DMSO_200M_050219_2,12535,LPFTMKKI False True LPFTMKKI 67.029304 326.532977283001 2492637.25 12529.0 nc|ENSG00000122376|Q86V20|SHLD2;;ENST00000497389.6_1_10:46918355-46938364:+|nuORF;;ENSG00000122376|ENST00000298786|SHLD2 2.9296650886535645 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12536 67.033 181.0 585700.0 25 0 92173.0 + 43593 YAENAMRYI 9 118 565.7682663155206 1129.521979697841 2 565.7692748904228 MULTI CID FTMS 0 0 0 12529 445216.65625 0.4494356207811781 -1 0.066497802734375 7 Unmodified _YAENAMRYI_ nc|ENSG00000114503|P52298-3|NCBP2 92.4914307365334 0.0139747738690111 4 YAENAMRY{I|L} 9 0 + 113.94 0.0 0.0 10.087 10.087 93.957 0.0 0.0 0.0 85.5879067473932 11.962724883926654 11.962724883926654 9.208187539523747 0 1.305462187404089 2.0 0.3807196863200844 1.274227503252014 + + YAENAMRY{I|L};YAEGGAMRY{I|L};YAENA{I|L}{[CA]|SS}Y{I|L};YAEN{I|L}[MN]Y{I|L};YAE[C(Carbamidomethyl (C))R]RY{I|L};YAEN{I|L}A{[CA]|SS}Y{I|L};YAENA{I|L}[YT]SV;YAEGG{I|L}[MN]Y{I|L};YAEN{I|L}A[YT]SV;YAEGGA{I|L}{[CA]|SS}Y{I|L} 10.087;9.2721;8.739;8.3809;8.1202;8.0501;7.8521;7.5656;7.1631;6.7996 +;-;-;-;-;-;-;-;-;- + 844 + 1 1.341 84410.0 1.0 7765 4769 12529 HBL1_DMSO_200M_050219_2,12536 HBL1_DMSO_200M_050219_2,12536,YAENAMRYI True True YAENAMRYI 67.032814 565.769274890423 5577621.0 12529.0 nc|ENSG00000114503|P52298-3|NCBP2 6.1560618082682295 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12537 67.038 289.0 425430.0 25 0 22619.0 + 26686 NYMMRNAVL 9 161 556.2727324404982 1110.5309119477963 2 556.2719604372978 MULTI CID FTMS 0 0 0 12529 300641.59375 0.9729158022234046 -1 0.066497802734375 8 Unmodified _NYMMRNAVL_ ENSG00000010292|ENST00000315579|NCAPD2 58.6788170122104 0.0268135626297836 4 [YN]M{M(Oxidation (M))|F}VEPV{I|L} 9 3 + 61.492 0.0 0.0 5.5372 5.5372 74.672 0.0 0.0 0.0 3.8573463480232633 3.8573463480232633 3.8573463480232633 2.4865124202832334 0 1.6237125054200234 2.0 0.6203715150305281 0.0 [YN]M{M(Oxidation (M))|F}VEPV{I|L};[YN]M{M(Oxidation (M))|F}VEVP{I|L};[YN]MMRNAV{I|L};[YN]MMRANV{I|L};[{I|L}P]DDYYNV{I|L};[{I|L}P]D{M(Oxidation (M))|F}MYNV{I|L};[YN]M{M(Oxidation (M))|F}VEP{I|L}V;[YN]MMRGGAV{I|L};[YN]MMRAGGV{I|L};[VP]EDYYNV{I|L} 5.5372;5.3133;5.1898;5.1026;4.9022;4.7436;4.488;4.3607;4.2734;3.9857 -;-;+;-;-;-;-;-;-;- + 2042 + 1 1.341 100063.6 1.0 7766 4769 12529 HBL1_DMSO_200M_050219_2,12537 HBL1_DMSO_200M_050219_2,12537,NYMMRNAVL True True NYMMRNAVL 67.038127 556.271960437298 2674455.25 12529.0 ENSG00000010292|ENST00000315579|NCAPD2 5.400802453358968 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12538 67.046 437.0 238030.0 25 0 19216.0 -1 VSTSSMGTL 9 130 449.713319120104 897.4120853070079 2 449.7131835818291 MULTI CID FTMS 0 0 0 12529 289557.75 1.0 0 0.0 9 Oxidation (M) _VSTSSM(Oxidation (M))GTL_ ENSG00000117305|ENST00000374490|HMGCL;ENST00000509389.5_1_1:24130838-24151905:-|nuORF;ENST00000513148.1_1_1:24137168-24151905:-|nuORF;nc|ENSG00000117305|P35914-2|HMGCL;nc|ENSG00000117305|P35914-3|HMGCL 23.1484247019978 0.2366544122328345 4 VS 2 -1 41.242 0.0 0.0 4.5957 0.0 0.0 0.0 708.2887257100203 708.2887257100203 9.30400924012389 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 0.3807196863200844 0.0 VS 4.5957 + + 133 + 1 1.341 86316.4 1.0 7767 4769 12529 HBL1_DMSO_200M_050219_2,12538 HBL1_DMSO_200M_050219_2,12538,VSTSSMGTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12539 67.049 156.0 473650.0 25 0 42951.0 + + 42027 DPFGPRRGGMIV 12 104 434.9004093440818 1301.6793986324456 3 434.8998901247978 MULTI CID FTMS 0 0 0 12529 214724.65625 1.0 0 0.0 10 Unmodified _VQRYQRPDQL_ ENST00000484891.1_1_20:1115545-1145721:+|nuORF;ENSG00000125818|ENST00000335877|PSMF1 5.40270961882225 0.7016457984575614 4 {[{M(Oxidation (M))|F}H]|[RQ]}VE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R{I|L}DQ 10 -1 + 40.635 0.0 0.0 3.1217 3.1217 71.348 0.0 0.0 0.0 4.884381005764311 25.15031251017077 4.884381005764311 6.020599913279625 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}VE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R{I|L}DQ;{[{M(Oxidation (M))|F}H]|[RQ]}VE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RD{I|L}Q;{[{M(Oxidation (M))|F}H]|[RQ]}VEE[WK]S{I|L}K;{[{M(Oxidation (M))|F}H]|[RQ]}VE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VG]{I|L}DQ;{[{M(Oxidation (M))|F}H]|[RQ]}VEE[WK]{I|L}SK;{[{M(Oxidation (M))|F}H]|[RQ]}VE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R{I|L}TAA;[VS][VP]{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}R{I|L}DQ;{[{M(Oxidation (M))|F}H]|[RQ]}VE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VG]D{I|L}Q;[VS][WR]{[QD]|[EN]|[WG]|[KD]|[RS]}R{I|L}DK;{[{M(Oxidation (M))|F}H]|[RQ]}VE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RDVAA 3.1217;2.6592;2.4279;2.4177;2.3535;2.1864;2.0698;1.9551;1.9149;1.7239 -;-;-;-;-;-;-;-;-;- 399 1 1.341 65496.7 1.0 7768 4769 12529 HBL1_DMSO_200M_050219_2,12539 HBL1_DMSO_200M_050219_2,12539,VQRYQRPDQL False False DPFGPRRGGMIV 67.048972 434.5659 1618959.125 12529.0 ENST00000484891.1_1_20:1115545-1145721:+|nuORF;;ENSG00000125818|ENST00000335877|PSMF1 3.3277613321940103 3.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12540 67.063 800.0 255300.0 25 0 30698.0 2612 ASQAGGSH 8 219 357.66245547619417 713.3103580191884 2 357.6620666384697 MULTI CID FTMS 0 0 0 12529 172681.15625 1.0 0 0.0 11 Unmodified _ASQAGGSH_ ENST00000520912.1_1_5:179296475-179297369:-|nuORF 2.302733041254933 0.8103549651115762 4 {I|L}{I|L}M 3 8 25.686 0.0 0.0 3.601 0.0 0.0 0.0 353.0726315389728 353.0726315389728 14.57711861032834 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}M 3.601 - 50 1 1.341 160504.1 0.7099999785423279 7769 4769 12529 HBL1_DMSO_200M_050219_2,12540 HBL1_DMSO_200M_050219_2,12540,ASQAGGSH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12541 67.076 774.0 300200.0 25 0 25391.0 + 44068 YISEENFRV 9 190 578.7849501890403 1155.5553474448805 2 578.7840453982353 MULTI CID FTMS 0 0 0 12529 182278.890625 0.5950642489994058 4 -0.4226150512695312 12 Unmodified _YISEENFRV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 27.628801355627647 0.1796483985696185 4 Y{I|L}SE[QA]EV 8 4 65.059 0.0 0.0 5.6301 0.0 0.0 0.0 233.1048525445922 233.1048525445922 23.922567660794755 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3494850021680094 0.2887254899964357 Y{I|L}SE[QA]EV 5.6301 - 1940 + 1 1.341 173633.1 1.0 7770 4769 12529 HBL1_DMSO_200M_050219_2,12541 HBL1_DMSO_200M_050219_2,12541,YISEENFRV False True YISEENFRV 67.076189 578.784045398235 3393743.25 12529.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 3.908623377482096 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12542 67.082 307.0 497670.0 25 0 45818.0 + 16444 KAIEELLKEA 10 181 572.3345797969545 1142.6546066607089 2 572.3342773318291 MULTI CID FTMS 0 0 0 12529 166325.171875 0.2551504880088407 -2 0.1789398193359375 13 Unmodified _KAIEELLKEA_ nc|ENSG00000186184|P0DPB5|POLR1D 115.8214108901486 0.0009806547676484 4 [KA]{I|L}ENK{I|L}KEA 10 2 + 87.778 0.0 0.0 7.6819 7.6819 80.803 0.0 0.0 0.0 2.1264977844307538 61.604183712549954 2.1264977844307538 1.7609125905568137 0 2.341129063296272 0.0 1.4916440611282624 1.113673220883544 [KA]{I|L}ENK{I|L}KEA;[KA]{I|L}EE{I|L}{I|L}KEA;[KA]{I|L}ENK{I|L}EKA;{[QN]|[E{I|L}]|[KN]}EA{I|L}K{I|L}KEA;[KA]{I|L}EE{I|L}{I|L}EKA;{[QN]|[E{I|L}]|[KN]}E{I|L}AK{I|L}KEA;{[QN]|[E{I|L}]|[KN]}EAK{I|L}{I|L}KEA;{[QN]|[E{I|L}]|[KN]}EA{I|L}K{I|L}EKA;[K{I|L}]AENK{I|L}KEA;{[QN]|[E{I|L}]|[KN]}E{I|L}AK{I|L}EKA 7.6819;7.5278;7.457;7.3662;7.3029;7.2916;7.2121;7.1413;7.1012;7.0666 -;+;-;-;-;-;-;-;-;- + 8623 1 1.341 115058.7 1.0 7771 4769 12529 HBL1_DMSO_200M_050219_2,12542 HBL1_DMSO_200M_050219_2,12542,KAIEELLKEA True True KAIEELLKEA 67.081797 572.334277331829 9987306.625 12529.0 nc|ENSG00000186184|P0DPB5|POLR1D 6.043576081593831 2.0 True 10.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12543 67.096 800.0 124130.0 25 0 7453.4 + -1 RDRCFSKYKWI 11 132 779.902822633825 0 779.9037963747978 PEAK CID FTMS 0 0 0 12529 157921.1875 1.0 0 0.0 14 Carbamidomethyl (C) _RDRC(Carbamidomethyl (C))FSKYKWI_ REV__ENSG00000105699|ENST00000605618|LSR;REV__nc|ENSG00000105699|Q86X29-2|LSR;REV__nc|ENSG00000105699|Q86X29-3|LSR;REV__nc|ENSG00000105699|Q86X29-4|LSR;REV__nc|ENSG00000105699|Q86X29-5|LSR;REV__nc|ENSG00000105699|Q86X29-6|LSR;REV__nc|ENSG00000105699|Q86X29|LSR 4.897010918128616 0.4761840153648597 4 VNTSQS 6 -1 58.039 0.0 0.0 3.7257 0.0 0.0 131.08495732803937 807.3839815729124 938.4689389009518 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 2.1237125054200234 0.805462187404089 VNTSQS 3.7257 - 2352 + 1 1.341 68988.0 0.959999978542328 7772 4769 12529 HBL1_DMSO_200M_050219_2,12543 HBL1_DMSO_200M_050219_2,12543,RDRCFSKYKWI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12544 67.104 371.0 471370.0 25 0 48007.0 + 27578 PLDAGFLDTID 11 175 392.8632938459341 1175.5680521380025 3 392.8631164431572 MULTI CID FTMS 0 0 0 12529 162378.421875 0.1441182280421535 -4 0.3218231201171875 15 Unmodified _PLDAGFLDTID_ REV__ENSG00000112159|ENST00000369393|MDN1 29.081581746732265 0.4093582134107448 4 [DP]{I|L}QQ{I|L} 6 -1 57.036 0.0 0.0 4.8517 0.0 0.0 0.0 478.1814303941148 478.1814303941148 40.55228025768591 0.0 0.0 0.0 0 1.7302046884880935 2.0 0.4876954943324545 0.3252574989159953 [DP]{I|L}QQ{I|L} 4.8517 - 1046 1 1.341 141493.8 1.0 7773 4769 12529 HBL1_DMSO_200M_050219_2,12544 HBL1_DMSO_200M_050219_2,12544,PLDAGFLDTID False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12545 67.118 800.0 193920.0 25 0 19289.0 15871 ISPLSAVSV 9 159 436.7579579598701 871.5013629865402 2 436.7581359744072 MULTI CID FTMS 0 0 0 12529 151446.46875 1.0 0 0.0 16 Unmodified _ISPLSAVSV_ ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C 50.855029805455786 0.0384952370514206 4 [{I|L}P]ST{I|L}[QT]{I|L} 8 7 + 40.721 0.0 0.0 4.6725 4.6725 73.093 0.0 0.0 0.0 7.755366246180962 3.476152965335899 3.476152965335899 3.476152965335899 0 0.2396518287104437 1.3010299956639813 1.325257498915995 0.0 [{I|L}P]ST{I|L}[QT]{I|L};[{I|L}P]ST{I|L}[VG]SV;[{I|L}P]STV{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[TV]|[{I|L}S]}PT{I|L}[QT]{I|L};[{I|L}P]STV{[VA]|[{I|L}G]}SV;{[TV]|[{I|L}S]}PT{I|L}[VG]SV;{[TV]|[{I|L}S]}PTV{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[TV]|[{I|L}S]}PTV{[VA]|[{I|L}G]}SV;[VP]TT{I|L}[QT]{I|L};[{I|L}P]{I|L}{[MG]|[TS]}[QT]{I|L} 4.6725;4.2736;4.1589;3.7826;3.76;3.3837;3.269;2.8701;2.5413;2.1649 -;-;-;-;-;-;-;-;-;- 342 1 1.341 123707.4 0.7799999713897705 7774 4769 12529 HBL1_DMSO_200M_050219_2,12545 HBL1_DMSO_200M_050219_2,12545,ISPLSAVSV True False LPLSTVGSV 67.117595 436.758135974407 1353362.375 12529.0 nc|ENSG00000100280|Q10567-2|AP1B1;;ENSG00000100280|ENST00000357586|AP1B1;;ENST00000472057.1_1_22:29727525-29736761:-|nuORF;;nc|ENSG00000100280|Q10567-4|AP1B1;;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;;nc|ENSG00000100280|Q10567-3|AP1B1 -0.2637183864911397 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12546 67.131 800.0 243000.0 25 0 22363.0 -1 LPDCVEDV 8 215 473.714134639238 0 473.7137634158134 PEAK CID FTMS 0 0 0 12529 147428.109375 1.0 0 0.0 17 Carbamidomethyl (C) _LPDC(Carbamidomethyl (C))VEDV_ ENSG00000156886|ENST00000389202|ITGAD 20.871210003555333 0.4015059659087983 4 T 1 -1 11.792 0.0 0.0 1.2473 0.0 0.0 713.2710294329697 128.07203088931877 841.3430603222885 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.25 0.0 T 1.2473 - 336 + 1 1.341 147747.1 0.8299999833106995 7775 4769 12529 HBL1_DMSO_200M_050219_2,12546 HBL1_DMSO_200M_050219_2,12546,LPDCVEDV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12547 67.146 800.0 191990.0 25 0 10481.0 + + 28812 FPYSATPSGTSI 12 179 614.2983370581451 1226.58212118309 2 614.2968627810478 MULTI CID FTMS 0 0 0 12529 143508.78125 0.6336307066909488 -1 0.066497802734375 18 Unmodified _PYYSNPVSTSL_ ENSG00000020633|ENST00000308873|RUNX3;nc|ENSG00000020633|Q13761-2|RUNX3 31.26834338654808 0.3580123756476716 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}[PS]GTS{I|L} 12 -1 + 62.663 0.0 0.0 5.1087 5.1087 77.339 0.0 0.0 0.0 5.3143043169374735 9.124628150806371 5.3143043169374735 5.3143043169374735 0 1.1677353201839438 1.5228787452803376 2.624803706770636 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}[PS]GTS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YSAT[PS]GTS{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AT[PS]GTS{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}T[PS]GTS{I|L};[{M(Oxidation (M))|F}V]TAT{M(Oxidation (M))|F}[PS]GTS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SAT{M(Oxidation (M))|F}[PS]GTS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}SAT[PS]GTS{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}ATE{[DS]|[MA]|[CV]|TT}GTS{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}[PS]SAS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YGTT[PS]GTS{I|L} 5.1087;4.6755;4.6597;4.6096;4.5804;4.5374;4.4773;4.4453;4.4348;4.2865 -;-;-;-;-;-;-;-;-;- 9789 1 1.341 113621.8 0.9399999976158142 7776 4769 12529 HBL1_DMSO_200M_050219_2,12547 HBL1_DMSO_200M_050219_2,12547,PYYSNPVSTSL False False FPYSATPSGTSI 67.146418 614.296862781048 9109662.0 12529.0 ENSG00000020633|ENST00000308873|RUNX3;;nc|ENSG00000020633|Q13761-2|RUNX3 5.531972090403239 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12548 67.151 255.0 378840.0 25 0 25943.0 + 38842 TVIDHLRSL 9 126 351.8734915779069 1052.5986453339208 3 351.8730651736259 MULTI CID FTMS 0 0 0 12529 112108.875 0.7374051916229163 1 -0.1478500366210937 19 Unmodified _TVIDHLRSL_ ENSG00000162851|ENST00000366514|TFB2M 43.9818466556824 0.0535980856389242 4 TV{I|L}DH{I|L} 6 3 71.481 0.0 0.0 6.7909 0.0 0.0 0.0 371.2049959772094 371.2049959772094 48.0473999108229 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.4247425010840047 0.0 + TV{I|L}DH{I|L} 6.7909 + + 285 + 1 1.341 82966.3 1.0 7777 4769 12529 HBL1_DMSO_200M_050219_2,12548 HBL1_DMSO_200M_050219_2,12548,TVIDHLRSL True True TVIDHLRSL 67.151155 351.873065173626 1642609.25 12529.0 ENSG00000162851|ENST00000366514|TFB2M 1.00516011317571 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12549 67.165 800.0 66821.0 25 0 6858.3 -1 PVERMRMRPWL 11 104 764.8968457977139 1527.7791386622278 2 764.8977538943291 MULTI CID FTMS 0 0 0 12529 104441.3125 0.223280759158937 -4 0.3218231201171875 20 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))PVERM(Oxidation (M))RMRPWL_ ENSG00000168310|ENST00000393593|IRF2;ENST00000512020.5_1_4:185339662-185350218:-|nuORF;nc|ENSG00000168310|P14316-2|IRF2 2.9952420565917617 0.861016188266951 4 NV{I|L} 3 -1 28.333 0.0 0.0 1.8545 0.0 0.0 1183.5739002912126 0.0 1183.5739002912126 0.0 16.34541316590491 0.0 0.0 0 0.2134679910804404 0.0 0.0 0.0 NV{I|L} 1.8545 - 412 1 1.341 42418.2 0.959999978542328 7778 4769 12529 HBL1_DMSO_200M_050219_2,12549 HBL1_DMSO_200M_050219_2,12549,PVERMRMRPWL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12551 67.169 2.8 14523000.0 25 0 1902600.0 + 32368 RYPTSIASL 9 53 504.27999202486376 1006.5454311165277 2 504.2800170779228 MULTI CID FTMS 0 0 0 12550 17995754.0 0.9242303581672708 1 -0.0387496948242187 1 Unmodified _RYPTSIASL_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 49.55428908609986 0.0413471690215031 4 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 5 + 70.423 0.0 0.0 6.9965 6.9965 79.624 0.0 0.0 0.0 2.04119982655925 13.010299956639813 2.04119982655925 2.04119982655925 0 1.305462187404089 1.3979400086720375 0.8494850021680094 0.0 {[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};[{I|L}T]G[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L};[YR][TP]S{I|L}AS{I|L} 6.9965;6.7938;6.5523;5.529 -;-;-;+ + 220 1 1.335 35898.2 1.0 7779 4770 12550 HBL1_DMSO_200M_050219_2,12551 HBL1_DMSO_200M_050219_2,12551,RYPTSIASL True True RYPTSIASL 67.169243 504.280017077923 2099814240.0 12550.0 nc|ENSG00000154473|O43684-2|BUB3;;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;;ENSG00000154473|ENST00000368865|BUB3 6.228747367858887 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12552 67.17 6.3 9156400.0 25 0 1335800.0 + 40581 VKPSVPLF 8 67 443.773538906193 885.532524879186 2 443.7736389040947 MULTI CID FTMS 0 0 0 12550 9210662.0 0.5375033044448504 -6 0.5256118774414062 2 Unmodified _VKPSVPLF_ REV__ENSG00000165792|ENST00000339374|METTL17;REV__ENST00000555902.6_1_14:21458708-21463066:+|nuORF;REV__nc|ENSG00000165792|Q9H7H0-2|METTL17;REV__nc|ENSG00000165792|Q9H7H0-3|METTL17 20.453626601364224 0.6087503291685402 4 {I|L}P 2 -1 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.375086883635 672.375086883635 14.58166256570955 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}P 5.0564 - 126 + 1 1.335 50977.0 1.0 7780 4770 12550 HBL1_DMSO_200M_050219_2,12552 HBL1_DMSO_200M_050219_2,12552,VKPSVPLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12553 67.172 2.4 21547000.0 25 0 2007600.0 + 8681 EVISKLYAV 9 77 511.30014703097 1020.58574112874 2 511.3004333376884 MULTI CID FTMS 0 0 0 12550 23423056.0 0.5371466164820395 -2 0.2143478393554687 3 Unmodified _EVISKLYAV_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 32.30548876998284 0.1201446275138228 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[HT]{I|L}{I|L}SG 9 5 51.29 0.0 0.0 5.0256 0.0 0.0 0.0 68.05146204166249 68.05146204166249 23.53794667124717 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.1307196863200843 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[HT]{I|L}{I|L}SG 5.0256 - 485 + 1 1.335 46469.3 1.0 7781 4770 12550 HBL1_DMSO_200M_050219_2,12553 HBL1_DMSO_200M_050219_2,12553,EVISKLYAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12554 67.173 10.0 3131100.0 25 0 164280.0 -1 RCHRRRRRCCC 11 50 866.9066694051579 1731.7987858771155 2 867.4086791872978 MULTI CID FTMS 0 0 0 12550 4227937.5 0.315111606161313 -2 0.2143478393554687 4 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 4 [MN][NP]{I|L}NAD 8 -1 34.345 0.0 0.0 1.9832 0.0 0.0 0.0 859.4080993449792 859.4080993449792 12.70689673945462 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 [MN][NP]{I|L}NAD 1.9832 - 53 + 1 1.335 31877.6 1.0 7782 4770 12550 HBL1_DMSO_200M_050219_2,12554 HBL1_DMSO_200M_050219_2,12554,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12555 67.174 19.0 2617100.0 25 0 268460.0 + 12639 GVLDKLRSV 9 63 493.803665457165 985.59277798113 2 493.8035766482353 MULTI CID FTMS 0 0 0 12550 2118494.75 0.8023273990562356 -1 0.1478500366210937 5 Unmodified _GVLDKLRSV_ ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-10|ZC3H14;nc|ENSG00000100722|Q6PJT7-11|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;nc|ENSG00000100722|Q6PJT7-3|ZC3H14;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;nc|ENSG00000100722|Q6PJT7-9|ZC3H14 24.99096001346401 0.2132109383330889 4 VG{I|L}DK{I|L}RSV 9 2 + 82.612 0.0 0.0 8.382 8.382 98.21 0.0 0.0 0.0 72.01636826809244 6.382805414149786 6.382805414149786 82.61230030668848 0 0.9247425010840048 2.0 0.0 0.0 VG{I|L}DK{I|L}RSV 8.382 - 42 + 1 1.335 43978.2 1.0 7783 4770 12550 HBL1_DMSO_200M_050219_2,12555 HBL1_DMSO_200M_050219_2,12555,GVLDKLRSV False True GVLDKLRSV 67.17397 493.803576648235 25352288.5 12550.0 nc|ENSG00000100722|Q6PJT7-11|ZC3H14;;nc|ENSG00000100722|Q6PJT7-10|ZC3H14;;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;;nc|ENSG00000100722|Q6PJT7-3|ZC3H14;;nc|ENSG00000100722|Q6PJT7-9|ZC3H14;;ENSG00000100722|ENST00000251038|ZC3H14 6.534137884775798 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12556 67.175 30.0 1952900.0 25 0 538570.0 33359 SGHGNAIP 8 66 376.6876933301991 751.3608337271983 2 376.6876403689384 MULTI CID FTMS 0 0 0 12550 1974729.5 0.7844665080767917 1 -0.0387496948242187 6 Unmodified _SGHGNAIP_ ENSG00000142303|ENST00000597188|ADAMTS10;ENST00000601163.1_1_19:8661189-8662174:-|nuORF;nc|ENSG00000142303|Q9H324|ADAMTS10 2.889219685676258 0.8067950007271085 4 {[TV]|[{I|L}S]}{I|L} 3 6 31.427 0.0 0.0 4.1826 0.0 0.0 0.0 435.1379387899514 435.1379387899514 14.939031817136708 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3494850021680094 0.0 {[TV]|[{I|L}S]}{I|L} 4.1826 - 48 1 1.335 52615.8 1.0 7784 4770 12550 HBL1_DMSO_200M_050219_2,12556 HBL1_DMSO_200M_050219_2,12556,SGHGNAIP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12557 67.176 22.0 2291000.0 25 0 378750.0 7621 EISRAAGKAV 10 87 501.2907679302925 1000.566982927385 2 501.2905456423759 MULTI CID FTMS 0 0 0 12550 1825571.125 1.0 0 0.0 7 Unmodified _EISRAAGKAV_ ENSG00000101052|ENST00000373030|IFT52;ENST00000476986.1_1_20:42232516-42233714:+|nuORF 13.90604991867851 0.6142120002215601 4 {[QN]|[E{I|L}]|[KN]}SE{I|L} 5 7 26.655 0.0 0.0 2.664 0.0 0.0 0.0 426.2474154108032 426.2474154108032 3.3547064036788754 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[QN]|[E{I|L}]|[KN]}SE{I|L} 2.664 - 60 + 1 1.335 46240.8 1.0 7785 4770 12550 HBL1_DMSO_200M_050219_2,12557 HBL1_DMSO_200M_050219_2,12557,EISRAAGKAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12558 67.178 50.0 1634700.0 25 0 253540.0 + 15172 IPDGGVHII 9 96 460.76373907398806 919.512925214776 2 460.7634765505791 MULTI CID FTMS 0 0 0 12550 1348535.125 1.0 0 0.0 8 Unmodified _IPDGGVHII_ ENSG00000183808|ENST00000520560|RBM12B 36.04419817259434 0.0971720506436186 4 {I|L}PD{[NV]|[RG]}H{I|L}{I|L} 8 2 + 65.073 0.0 0.0 7.0769 7.0769 91.051 0.0 0.0 0.0 25.157825736568128 10.253195141304715 10.253195141304715 10.253195141304715 0 1.2134679910804405 1.5228787452803376 0.4247425010840047 0.4247425010840047 {I|L}PD{[NV]|[RG]}H{I|L}{I|L};[HV]NDP{I|L}{I|L}{I|L};[DP]{[NV]|[RG]}H{I|L}{I|L}{I|L};[HV]ND{I|L}P{I|L}{I|L};[HV]{I|L}DNP{I|L}{I|L};[HV]GGDP{I|L}{I|L}{I|L};[HV]N{I|L}DP{I|L}{I|L};[HV]VENP{I|L}{I|L};[{I|L}V]HDNP{I|L}{I|L};[HV]{I|L}NDP{I|L}{I|L} 7.0769;5.9619;5.4237;4.9749;4.9749;4.9546;4.6475;4.6475;4.6378;4.3202 -;-;-;-;-;-;-;-;-;- 663 + 1 1.335 67736.9 1.0 7786 4770 12550 HBL1_DMSO_200M_050219_2,12558 HBL1_DMSO_200M_050219_2,12558,IPDGGVHII True True IPDGGVHII 67.177645 460.763476550579 48361443.0 12550.0 ENSG00000183808|ENST00000520560|RBM12B 2.4672654469807944 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12559 67.179 27.0 1370200.0 25 0 116050.0 + 25050 MPTQWRTI 8 70 516.7680991429748 1031.5216453527496 2 516.7686645388603 MULTI CID FTMS 0 0 0 12550 1317374.375 0.7058312917080423 1 -0.0387496948242187 9 Unmodified _MPTQWRTI_ ENSG00000096401|ENST00000371477|CDC5L 27.628801355627647 0.4629596117395134 4 MPTQWRT{I|L} 8 0 + 65.17 0.0 0.0 6.3179 6.3179 87.689 0.0 0.0 0.0 52.07116601236436 9.948500216800936 9.948500216800936 9.262137858390815 0 0.3054621874040891 1.3010299956639813 0.0 0.0 + + MPTQWRT{I|L};MPT[AG]WRT{I|L} 6.3179;5.42 +;- + 49 + 1 1.335 39993.0 1.0 7787 4770 12550 HBL1_DMSO_200M_050219_2,12559 HBL1_DMSO_200M_050219_2,12559,MPTQWRTI False True MPTQWRTI 67.178822 516.76866453886 14345190.0 12550.0 ENSG00000096401|ENST00000371477|CDC5L 5.638362089792888 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12560 67.181 80.0 842420.0 25 0 106970.0 + 30728 RGLDDIKDLKV 11 86 424.58225270717287 1270.7249287217187 3 424.5821411013603 MULTI CID FTMS 0 0 0 12550 947412.625 0.7224587481380436 1 -0.0387496948242187 10 Unmodified _RGLDDIKDLKV_ ENSG00000155363|ENST00000369645|MOV10;ENST00000488160.5_1_1:113239361-113241636:+|nuORF 56.327864893619264 0.0840483319501079 4 {[NV]|[RG]}{I|L}DD{I|L}KD{I|L}KV 11 0 {[NV]|[RG]}{I|L}DD + + 50.853 14.054 2.5265 4.0019 4.0019 48.649 0.0 0.0 0.0 0.0 37.66502535772155 0.0 0.0 0 1.924742501084005 0.0 0.0 0.25 + + {[NV]|[RG]}{I|L}DD{I|L}KD{I|L}KV 4.0019 + + 403 + 1 1.335 61175.8 1.0 7788 4770 12550 HBL1_DMSO_200M_050219_2,12560 HBL1_DMSO_200M_050219_2,12560,RGLDDIKDLKV True True RGLDDIKDLKV 67.180632 424.58214110136 19899358.0 12550.0 ENST00000488160.5_1_1:113239361-113241636:+|nuORF;;ENSG00000155363|ENST00000369645|MOV10 8.445499102274576 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12561 67.182 49.0 1224600.0 25 0 218820.0 33706 SKMEGGHFV 9 97 496.2379134987604 990.4612740643208 2 496.7419311404228 MULTI CID FTMS 0 0 0 12550 918880.5625 0.2158738565450407 -12 1.14007568359375 11 Unmodified _SKMEGGHFV_ ENSG00000149115|ENST00000358252|TNKS1BP1;ENST00000528882.5_1_11:57067274-57087552:-|nuORF;nc|ENSG00000149115|Q9C0C2-2|TNKS1BP1 8.593279151180031 0.6146971463335029 4 [KS]YAEM 6 7 21.304 0.0 0.0 2.1509 0.0 0.0 0.0 278.11518274478755 278.11518274478755 0.1329657522032334 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 [KS]YAEM 2.1509 - 211 + 1 1.335 50154.3 1.0 7789 4770 12550 HBL1_DMSO_200M_050219_2,12561 HBL1_DMSO_200M_050219_2,12561,SKMEGGHFV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12562 67.183 63.0 879700.0 25 0 58063.0 + 25014 MPQIETRVI 9 101 543.802475914173 1085.590398895146 2 543.8018676638603 MULTI CID FTMS 0 0 0 12550 883669.9375 0.416867571404327 -6 0.5256118774414062 12 Unmodified _MPQIETRVI_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 35.61225514009592 0.0995432151795903 4 MPQ{I|L}E[R{I|L}]S{I|L} 9 2 + 67.159 0.0 0.0 6.1864 6.1864 86.373 0.0 0.0 0.0 40.24312369443963 1.5366288787019329 1.5366288787019329 9.208187539523747 0 0.6694451763165201 1.3979400086720375 0.0 0.6989700043360187 MPQ{I|L}E[R{I|L}]S{I|L};MP[AG]{I|L}E[R{I|L}]S{I|L};[QP]M{I|L}W[VS]{I|L}{I|L};[VS][WP]E[R{I|L}]S{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}W[VS]{I|L}{I|L};[QP][KP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L}{I|L};[VP]C(Carbamidomethyl (C)){I|L}W[VS]{I|L}{I|L} 6.1864;5.3382;2.3434;2.1776;0.89998;0.71425;0.1345 -;-;-;-;-;-;- 160 + 1 1.335 48628.0 1.0 7790 4770 12550 HBL1_DMSO_200M_050219_2,12562 HBL1_DMSO_200M_050219_2,12562,MPQIETRVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12563 67.185 36.0 1483900.0 25 0 158840.0 + 19577 IFPDRATLY 9 74 548.2950462992703 1094.5755396653406 2 548.2942382693291 MULTI CID FTMS 0 0 0 12550 985692.0 0.460306313759182 -6 0.5256118774414062 13 Unmodified _LFVLSWAPY_ nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-2|PRMT1;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;ENSG00000126457|ENST00000454376|PRMT1 18.13498045792455 0.3457906370836843 4 {I|L}{M(Oxidation (M))|F}PD 4 6 31.67 0.0 0.0 2.8934 0.0 0.0 0.0 619.3212374322874 619.3212374322874 -1.3849870287030157 0.0 -1.3849870287030157 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}PD 2.8934 - 177 + 1 1.335 49361.7 1.0 7791 4770 12550 HBL1_DMSO_200M_050219_2,12563 HBL1_DMSO_200M_050219_2,12563,LFVLSWAPY False False IFPDRATLY 67.184657 548.294238269329 97547120.0 12550.0 nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;;ENSG00000126457|ENST00000454376|PRMT1 3.885717233022054 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12564 67.186 59.0 848980.0 25 0 76096.0 + 5703 DPIVNRWYN 9 96 588.7908219485089 1175.5670909638177 2 588.7911254763603 MULTI CID FTMS 0 0 0 12550 876625.4375 0.5122416789072378 -3 0.3267898559570312 14 Unmodified _DPIVNRWYN_ REV__ENSG00000038002|ENST00000264595|AGA;REV__ENST00000506853.5_1_4:178355638-178363529:-|nuORF;REV__ENST00000510955.5_1_4:178358517-178361430:-|nuORF 36.12702656103203 0.0967173616627612 4 DP{I|L}QQ{I|L}{[CA]|SS}V 9 -1 97.362 0.0 0.0 8.2821 0.0 0.0 0.0 205.0588015192016 205.0588015192016 81.19070971708595 0.0 0.0 0.0 0 2.1549471895720984 2.0 1.110924374808178 0.8494850021680094 DP{I|L}QQ{I|L}{[CA]|SS}V 8.2821 - 500 + 1 1.335 43028.9 1.0 7792 4770 12550 HBL1_DMSO_200M_050219_2,12564 HBL1_DMSO_200M_050219_2,12564,DPIVNRWYN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12565 67.189 123.0 743990.0 25 0 113180.0 39516 VATTVISKML 10 90 531.8162958527049 1061.6180387722095 2 532.3169433474541 MULTI CID FTMS 0 0 0 12550 842110.5 0.9161789281881914 1 -0.0387496948242187 15 Unmodified _VATTVISKML_ ENSG00000149131|ENST00000278407|SERPING1;nc|ENSG00000149131|P05155-3|SERPING1 7.910154910731844 0.6900473968920092 4 {[VA]|[{I|L}G]}VM 4 6 27.703 0.0 0.0 2.6095 0.0 0.0 0.0 658.3796409052753 658.3796409052753 11.505149978319904 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[VA]|[{I|L}G]}VM 2.6095 - 149 1 1.335 76718.3 1.0 7793 4770 12550 HBL1_DMSO_200M_050219_2,12565 HBL1_DMSO_200M_050219_2,12565,VATTVISKML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12566 67.19 78.0 666840.0 25 0 68528.0 + 44796 YPMRIDESI 9 82 562.2762695885935 1122.537986243987 2 562.2769653201103 MULTI CID FTMS 0 0 0 12550 712198.375 0.8473217234803504 -1 0.1478500366210937 16 Unmodified _YPMRIDESI_ ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L 43.77239144664712 0.0547478964384323 4 YPSY 4 6 47.211 0.0 0.0 4.2058 0.0 0.0 0.0 609.2831514947874 609.2831514947874 4.513268320406496 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.0 YPSY 4.2058 - 233 + 1 1.335 47208.3 1.0 7794 4770 12550 HBL1_DMSO_200M_050219_2,12566 HBL1_DMSO_200M_050219_2,12566,YPMRIDESI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12567 67.192 73.0 604820.0 25 0 93772.0 + 20841 LMCNESSMQSL 11 70 621.7597889825445 1241.5050250318889 2 621.7605468630791 MULTI CID FTMS 0 0 0 12550 698554.875 0.0616151130837374 -3 0.3267898559570312 17 Unmodified _LMCNESSMQSL_ ENSG00000165409|ENST00000298171|TSHR;nc|ENSG00000165409|P16473|TSHR 13.042465956692816 0.7638483625850725 4 {M(Oxidation (M))|F}Q[SG]EVS{I|L} 8 7 31.331 0.0 0.0 2.5236 0.0 0.0 376.0874806134781 0.0 376.0874806134781 0.0 14.341153291726982 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.0 {M(Oxidation (M))|F}Q[SG]EVS{I|L} 2.5236 - 188 1 1.335 40361.4 1.0 7795 4770 12550 HBL1_DMSO_200M_050219_2,12567 HBL1_DMSO_200M_050219_2,12567,LMCNESSMQSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12568 67.194 107.0 1016900.0 25 0 162000.0 + 12640 GVLDKLRSV 9 94 329.5382713907269 985.5929847723808 3 329.5377685427666 MULTI CID FTMS 0 0 0 12550 624836.4375 0.8587859360700155 -1 0.1478500366210937 18 Unmodified _GVLDKLRSV_ ENSG00000100722|ENST00000251038|ZC3H14;nc|ENSG00000100722|Q6PJT7-10|ZC3H14;nc|ENSG00000100722|Q6PJT7-11|ZC3H14;nc|ENSG00000100722|Q6PJT7-2|ZC3H14;nc|ENSG00000100722|Q6PJT7-3|ZC3H14;nc|ENSG00000100722|Q6PJT7-4|ZC3H14;nc|ENSG00000100722|Q6PJT7-5|ZC3H14;nc|ENSG00000100722|Q6PJT7-9|ZC3H14 26.268140514670165 0.1969607489560049 4 [VG]{I|L}DK{I|L} 6 3 58.218 0.0 0.0 5.9069 0.0 0.0 0.0 357.1899508111938 357.1899508111938 47.416440611282624 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.3807196863200844 0.4247425010840047 + [VG]{I|L}DK{I|L} 5.9069 + + 110 + 1 1.335 90412.8 1.0 7796 4770 12550 HBL1_DMSO_200M_050219_2,12568 HBL1_DMSO_200M_050219_2,12568,GVLDKLRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12569 67.196 46.0 1673900.0 25 0 223140.0 35963 SVPTAALPAL 10 96 470.280399098829 938.546245264458 2 470.2826110720634 MULTI CID FTMS 0 0 0 12550 561554.25 1.0 0 0.0 19 Unmodified _SVPTAALPAL_ ENSG00000106331|ENST00000639438|PAX4;nc|ENSG00000106331|O43316-4|PAX4;nc|ENSG00000106331|O43316|PAX4 20.453626601364224 0.5043500229302764 4 {[VA]|[{I|L}G]}[DV][PG]A{I|L}VV 10 8 + 38.05 0.0 0.0 4.0541 4.0541 70.306 0.0 0.0 0.0 3.168464195985166 7.269987279362628 3.168464195985166 3.168464195985166 0 0.4247425010840047 2.0 0.2887254899964357 0.0 {[VA]|[{I|L}G]}[DV][PG]A{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}VG[PG]A{I|L}VV;{[VA]|[{I|L}G]}[DV][QP]{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}VG[QP]{I|L}VV;[VP]ST[PG]A{I|L}VV;[VS]PT[PG]A{I|L}VV;[VP]ST[QP]{I|L}VV;[VS]PT[QP]{I|L}VV;{[VA]|[{I|L}G]}{I|L}C(Carbamidomethyl (C))[H{I|L}]KV;{[VA]|[{I|L}G]}[W{I|L}][VS]P[PA] 4.0541;3.7165;3.6789;3.3413;2.4416;2.3055;2.0663;1.9303;1.5688;1.1274 -;-;-;-;-;-;-;-;-;- 448 1 1.335 63312.5 1.0 7797 4770 12550 HBL1_DMSO_200M_050219_2,12569 HBL1_DMSO_200M_050219_2,12569,SVPTAALPAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12570 67.204 451.0 394940.0 25 0 40053.0 -1 0 133 975.4158035925508 1948.8170542519017 2 975.4169189333916 MULTI CID FTMS 0 0 0 12550 490826.59375 0.4788372570174959 -2 0.2143478393554687 20 4 [YQ]{I|L}ENCCYNEATTN{[{M(Oxidation (M))|F}H]|[RQ]} 16 -1 + 126.18 0.0 0.0 6.4749 6.4749 86.237 0.0 0.0 0.0 19.669854104648152 6.154017961346412 6.154017961346412 9.013902021140495 0 0.3494850021680094 1.154901959985743 2.5545970543767123 2.555462187404089 [YQ]{I|L}ENCCYNEATTN{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}ENCCYGGEATTN{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}EGGCCYNEATTN{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}ENCCYNEATTGG{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}ENYCCNEATTN{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}ENCCYNEAT[KS]{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}EGGCCYGGEATTN{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}EGGCCYNEATTGG{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}ENCCYGGEATTGG{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}ENCCYNE{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]} 6.4749;6.0124;6.0124;6.0124;5.9588;5.5651;5.5506;5.5506;5.5506;5.5361 -;-;-;-;-;-;-;-;-;- 28195 1 1.335 118690.7 1.0 7798 4770 12550 HBL1_DMSO_200M_050219_2,12570 HBL1_DMSO_200M_050219_2,12570, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12572 67.209 141.0 372850.0 25 0 29660.0 + 27038 VTLDPDTANPEL 12 81 642.819826352426 1283.625099771652 2 642.8201782107353 MULTI CID FTMS 0 0 0 12571 462539.25 0.6327299141116379 2 -0.2360153198242187 1 Unmodified _PEPYRFHPEL_ nc|ENSG00000154370|Q96F44-3|TRIM11;ENSG00000154370|ENST00000284551|TRIM11 37.97399986684836 0.1789611706409123 4 [EP]SANV[KS]N 9 8 64.336 0.0 0.0 5.0121 0.0 0.0 0.0 354.16696424002515 354.16696424002515 31.18801098477617 0.0 0.0 0.0 0 0.7887254899964358 1.6989700043360187 1.6861818737241734 0.8494850021680094 [EP]SANV[KS]N 5.0121 - 836 1 1.335 46796.0 1.0 7799 4771 12571 HBL1_DMSO_200M_050219_2,12572 HBL1_DMSO_200M_050219_2,12572,PEPYRFHPEL False False VTLDPDTANPEL 67.208607 642.820178210735 12576951.0 12571.0 nc|ENSG00000154370|Q96F44-3|TRIM11;;ENSG00000154370|ENST00000284551|TRIM11 5.966207504272461 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12573 67.212 156.0 617610.0 25 0 160400.0 + 45706 YYDGDVGNYYY 11 107 696.2747061106709 1390.5348592881417 2 696.7763549685478 MULTI CID FTMS 0 0 0 12571 816503.875 0.1347183504744365 -2 0.1865997314453125 2 Unmodified _YYDGDVGNYYY_ ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF 32.78568957990786 0.3235288296534633 4 YYDGD[RD]Y 8 5 39.848 0.0 0.0 2.8657 0.0 0.0 0.0 340.1088187734012 340.1088187734012 14.26667090001817 0.0 0.0 0.0 0 0.0 2.0 0.2887254899964357 0.6861818737241735 YYDGD[RD]Y 2.8657 - 1511 1 1.335 73790.7 1.0 7800 4771 12571 HBL1_DMSO_200M_050219_2,12573 HBL1_DMSO_200M_050219_2,12573,YYDGDVGNYYY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12574 67.213 18.0 2954200.0 25 0 438640.0 + 38693 TTNLRHTI 8 79 478.2704134046866 954.5262738761731 2 478.2691833376884 MULTI CID FTMS 0 0 0 12571 2231232.25 1.0 0 0.0 3 Unmodified _TTNLRHTI_ REV__ENSG00000069188|ENST00000392650|SDK2;REV__ENST00000479356.1_1_17:71354047-71433905:-|nuORF;REV__nc|ENSG00000069188|Q58EX2-2|SDK2;REV__nc|ENSG00000069188|Q58EX2-3|SDK2;REV__nc|ENSG00000069188|Q58EX2-4|SDK2 20.871210003555333 0.6025813472596342 4 {I|L} 1 -1 12.764 0.0 0.0 1.3372 0.0 0.0 823.4314843027342 0.0 823.4314843027342 0.0 -10.132788282110216 -10.132788282110216 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3372 + + 122 + 1 1.335 46231.3 1.0 7801 4771 12571 HBL1_DMSO_200M_050219_2,12574 HBL1_DMSO_200M_050219_2,12574,TTNLRHTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12575 67.215 78.0 726080.0 25 0 43693.0 + 5125 DIGPPYVLAV 10 102 522.2904842467292 1042.5664155602583 2 522.2907592654228 MULTI CID FTMS 0 0 0 12571 505423.25 1.0 0 0.0 4 Unmodified _DIGPPYVLAV_ REV__ENSG00000151240|ENST00000280886|DIP2C 20.453626601364224 0.5043500229302764 4 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]E{I|L}EGV 9 -1 + 50.736 0.0 0.0 4.8665 4.8665 81.779 0.0 0.0 0.0 5.54046043094754 32.00827206916173 5.54046043094754 9.273174902439578 0 1.1307196863200843 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]E{I|L}EGV;{NN|[MP]|[D{I|L}]|[EV]}G[{I|L}V]E{I|L}ER;{NN|[MP]|[D{I|L}]|[EV]}G[{I|L}V]E{I|L}WV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]E{I|L}WV;{[QN]|[E{I|L}]|[KN]}[RV]E{I|L}EGV;[VG]E[{I|L}V]E{I|L}ER;[VG]E[{I|L}V]E{I|L}WV;{NN|[MP]|[D{I|L}]|[EV]}G{[QV]|[N{I|L}]|[RA]|[KV]}{[QV]|[N{I|L}]|[RA]|[KV]}EGV;{NN|[MP]|[D{I|L}]|[EV]}G[{I|L}V]T[RN]GV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]T[RN]GV 4.8665;3.977;3.9238;3.8799;3.5396;3.5334;3.4802;3.2369;3.117;3.068 -;-;-;-;-;-;-;-;-;- 337 1 1.335 50965.9 1.0 7802 4771 12571 HBL1_DMSO_200M_050219_2,12575 HBL1_DMSO_200M_050219_2,12575,DIGPPYVLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12576 67.223 454.0 428950.0 25 0 18353.0 -1 0 137 902.9176517863274 1803.820750639455 2 902.9189330935478 MULTI CID FTMS 0 0 0 12571 470359.9375 1.0 0 0.0 5 4 [MN]PN{I|L}NEE[KT]G[WM]{I|L}Q 15 -1 + 100.4 0.0 0.0 5.5658 5.5658 70.232 0.0 0.0 0.0 58.49800870742554 9.553710335083792 9.553710335083792 0.0565842292838425 0 1.5356668758921828 1.5228787452803376 0.7742275032520141 2.499134866972623 [MN]PN{I|L}NEE[KT]G[WM]{I|L}Q;[MN]PN{I|L}NEE[RH]Y{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NE[RH]EY{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}EY{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NM[RH]EENY{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NEE[RH][H{I|L}][WD];[NP]{I|L}NM[RH]EEN{I|L}HG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]P[YQ][KT]EENY{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}[RH]EENY{M(Oxidation (M))|F}{I|L}K;[NP]{I|L}NEM[RH]ENY{M(Oxidation (M))|F}{I|L}Q 5.5658;5.5627;5.0627;4.8958;3.9491;3.8522;3.8444;3.8129;3.7783;3.7578 -;-;-;-;-;-;-;-;-;- 7376 + 1 1.335 133531.7 1.0 7803 4771 12571 HBL1_DMSO_200M_050219_2,12576 HBL1_DMSO_200M_050219_2,12576, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12577 67.225 87.0 904410.0 25 0 51659.0 + 41492 VPMGGVRLV 9 111 464.276147918 0 464.2758361697197 PEAK CID FTMS 0 0 0 12571 357540.40625 0.895961424762233 1 -0.1479415893554687 6 Unmodified _VPMGGVRLV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 16.942295170755138 0.2326366549411506 4 PM 2 7 14.464 0.0 0.0 1.5611 0.0 0.0 99.0677712601907 596.3543742839088 695.4221455440995 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + PM 1.5611 + + 21 + 1 1.335 65403.3 1.0 7804 4771 12571 HBL1_DMSO_200M_050219_2,12577 HBL1_DMSO_200M_050219_2,12577,VPMGGVRLV False True VPMGGVRLV 67.224684 464.27583616972 3251347.5 12571.0 ENSG00000172534|ENST00000310441|HCFC1;;nc|ENSG00000172534|P51610-2|HCFC1;;nc|ENSG00000172534|P51610-4|HCFC1 -0.1272894541422526 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12578 67.228 183.0 721390.0 25 0 62937.0 + -1 LVCLGRAAL 9 153 486.7858452355072 971.5571375378144 2 486.7852050662041 MULTI CID FTMS 0 0 0 12571 328234.03125 0.6854995243234622 -9 0.7493667602539062 7 Carbamidomethyl (C) _LVC(Carbamidomethyl (C))LGRAAL_ REV__ENSG00000116014|ENST00000234371|KISS1R 13.50788311687929 0.4710407108020397 4 {I|L} 1 -1 11.99 0.0 0.0 1.2341 0.0 0.0 840.4620885649613 0.0 840.4620885649613 0.0 0.2069634257911268 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2341 + + 154 + 1 1.335 102692.3 1.0 7805 4771 12571 HBL1_DMSO_200M_050219_2,12578 HBL1_DMSO_200M_050219_2,12578,LVCLGRAAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12579 67.231 159.0 410560.0 25 0 44143.0 + 41133 VPAATFQSI 9 106 467.25582197072566 932.4970910082512 2 467.2556640505791 MULTI CID FTMS 0 0 0 12571 290886.71875 0.9724375011034548 1 -0.1479415893554687 8 Unmodified _VPAATFQSI_ ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400 60.38955033654506 0.025866396858536 4 [PA]ATV{M(Oxidation (M))|F}QS{I|L} 9 2 + 47.915 0.0 0.0 5.1383 5.1383 75.748 0.0 0.0 0.0 10.016894462103991 10.330145895351848 10.016894462103991 3.979400086720375 0 0.8182503180159344 0.8239087409443188 1.1861818737241734 0.0 [PA]ATV{M(Oxidation (M))|F}QS{I|L};[PA]AT{M(Oxidation (M))|F}VQS{I|L};[PA]AVT{M(Oxidation (M))|F}QS{I|L};[PA]ATV{M(Oxidation (M))|F}[AG]S{I|L};[VP]DK{M(Oxidation (M))|F}QS{I|L};[VP][SG]V{M(Oxidation (M))|F}QS{I|L};[PA]AT{M(Oxidation (M))|F}QVS{I|L};[VP]AAT{M(Oxidation (M))|F}QS{I|L};[PA]VAT{M(Oxidation (M))|F}QS{I|L};[PA]G{I|L}T{M(Oxidation (M))|F}QS{I|L} 5.1383;4.7116;4.4133;4.1508;4.0641;4.0338;3.9805;3.9734;3.9016;3.7676 -;-;-;-;-;-;-;+;-;- + 584 1 1.335 52698.6 1.0 7806 4771 12571 HBL1_DMSO_200M_050219_2,12579 HBL1_DMSO_200M_050219_2,12579,VPAATFQSI True True VPAATFQSI 67.231338 467.255664050579 3310892.75 12571.0 nc|ENSG00000183495|Q96L91-4|EP400;;nc|ENSG00000183495|Q96L91-3|EP400;;nc|ENSG00000183495|Q96L91|EP400;;nc|ENSG00000183495|Q96L91-5|EP400;;ENSG00000183495|ENST00000389561|EP400 2.1618186235427856 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12580 67.241 533.0 406790.0 25 0 68500.0 + 5859 DPWARGSYSYV 11 146 650.8018566831485 1299.5891604330968 2 650.8026611208916 MULTI CID FTMS 0 0 0 12571 283548.90625 0.8991554826736303 1 -0.1479415893554687 9 Unmodified _DPWARGSYSYV_ ENSG00000004487|ENST00000400181|KDM1A;ENST00000602503.1_1_1:23408727-23408946:+|nuORF;nc|ENSG00000004487|O60341|KDM1A 53.4695610476455 0.0984156443811599 4 [DP]WA[KG]YSDYV 11 3 + 70.487 0.0 0.0 5.4238 5.4238 77.578 0.0 0.0 0.0 7.272437815030621 13.610469015915776 7.272437815030621 4.362370141699145 0 1.7614393726401687 1.3979400086720375 0.8494850021680094 0.0 [DP]WA[KG]YSDYV;[DP]W[KQ]YSDYV;[WP]DA[KG]YSDYV;[DP]WA[KG]YDSYV;[DP]WA[KG]DYSYV;[WP]D[KQ]YSDYV;[DP]W[KQ]YDSYV;[DP]WAR[SG]YSYV;[DP]WA{[QV]|[N{I|L}]|[RA]|[KV]}HADYV;[DP]WA[KG]YSYDV 5.4238;5.0881;4.8642;4.8558;4.6242;4.5285;4.5202;4.4535;4.3765;4.3451 -;-;-;-;-;-;-;+;-;- + 2535 1 1.335 159067.0 1.0 7807 4771 12571 HBL1_DMSO_200M_050219_2,12580 HBL1_DMSO_200M_050219_2,12580,DPWARGSYSYV True True DPWARGSYSYV 67.24073 650.802661120892 3910809.5 12571.0 ENSG00000004487|ENST00000400181|KDM1A;;ENST00000602503.1_1_1:23408727-23408946:+|nuORF;;nc|ENSG00000004487|O60341|KDM1A 7.807134787241618 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12581 67.243 104.0 570970.0 25 0 55280.0 + 11867 GLSTGALVAI 10 98 451.27126166713975 0 451.2710449099541 PEAK CID FTMS 0 0 0 12571 288158.0 1.0 0 0.0 10 Unmodified _GLSTGALVAI_ ENSG00000113100|ENST00000231021|CDH9;ENSG00000113361|ENST00000265071|CDH6;ENST00000505020.1_1_5:26881247-26890759:-|nuORF;nc|ENSG00000113361|P55285-2|CDH6 14.838274106304384 0.3381107837965078 4 VKVG 4 9 20.433 0.0 0.0 2.269 0.0 0.0 202.13174192343257 312.1275728815063 514.2593148049389 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 VKVG 2.269 - 64 + 1 1.335 52985.6 1.0 7808 4771 12571 HBL1_DMSO_200M_050219_2,12581 HBL1_DMSO_200M_050219_2,12581,GLSTGALVAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12582 67.246 130.0 449490.0 25 0 36494.0 + 37934 TMADQIVTV 9 90 489.25212762811 0 489.2526428103447 PEAK CID FTMS 0 0 0 12571 248859.53125 0.7559666841367466 -1 0.0387496948242187 11 Unmodified _TMADQIVTV_ ENSG00000116266|ENST00000370008|STXBP3 37.97399986684836 0.0716774499419844 4 {I|L}TMA 4 7 13.448 0.0 0.0 1.3772 0.0 0.0 317.1952820122762 240.06250940494377 557.25779141722 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 {I|L}TMA 1.3772 - 69 + 1 1.335 52770.5 1.0 7809 4771 12571 HBL1_DMSO_200M_050219_2,12582 HBL1_DMSO_200M_050219_2,12582,TMADQIVTV True True TMADQIVTV 67.245603 489.252642810345 2295900.25 12571.0 ENSG00000116266|ENST00000370008|STXBP3 5.696815013885498 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12583 67.259 800.0 262170.0 25 0 24606.0 + 16446 KAIEELLKEA 10 198 381.8921246001956 1142.6545444007868 3 381.8920776247978 MULTI CID FTMS 0 0 0 12571 229106.140625 1.0 0 0.0 12 Unmodified _KAIEELLKEA_ nc|ENSG00000186184|P0DPB5|POLR1D 39.21299971606389 0.1658776112144286 4 {[CP]|[EA]}K{I|L}E{I|L}{I|L} 7 6 55.965 0.0 0.0 4.8978 0.0 0.0 0.0 343.1664211920556 343.1664211920556 36.380483973073694 0.0 0.0 0.0 0 1.305462187404089 1.0 1.524227503252014 0.0 {[CP]|[EA]}K{I|L}E{I|L}{I|L} 4.8978 - 1198 1 1.335 168032.0 1.0 7810 4771 12571 HBL1_DMSO_200M_050219_2,12583 HBL1_DMSO_200M_050219_2,12583,KAIEELLKEA False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12584 67.272 696.0 215370.0 25 0 26276.0 + 22640 LPYPSSATL 9 166 474.7558146829887 947.4970764327776 2 474.7571594119072 MULTI CID FTMS 0 0 0 12571 227594.25 1.0 0 0.0 13 Unmodified _LPYPSSATL_ ENSG00000110422|ENST00000303296|HIPK3;nc|ENSG00000110422|Q9H422-2|HIPK3 53.57557251787612 0.0325303259649373 4 [{I|L}P]Y[RD]AT{I|L} 8 3 + 58.58 0.0 0.0 6.1826 6.1826 75.96 0.0 0.0 0.0 1.7609125905568137 16.40978057358332 1.7609125905568137 1.7609125905568137 0 1.25 1.3979400086720375 0.9247425010840048 0.0 [{I|L}P]Y[RD]AT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[RD]AT{I|L};[{I|L}P]Y[DN]{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}NT{I|L}YP{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[DN]{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}N{I|L}{M(Oxidation (M))|F}{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DV]Q{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}N{I|L}TYP{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DV]{[VA]|[{I|L}G]}AT{I|L};[PS]{[SA]|[TG]}T{I|L}YP{I|L} 6.1826;5.9968;5.8919;5.7072;5.7061;5.6701;5.6563;5.5395;4.9695;4.9687 -;-;-;-;-;-;-;-;-;- 1397 1 1.335 116736.8 1.0 7811 4771 12571 HBL1_DMSO_200M_050219_2,12584 HBL1_DMSO_200M_050219_2,12584,LPYPSSATL True True LPYPSSATL 67.271505 474.757159411907 1640006.5 12571.0 ENSG00000110422|ENST00000303296|HIPK3;;nc|ENSG00000110422|Q9H422-2|HIPK3 3.960664908091227 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12585 67.283 612.0 923200.0 25 0 93396.0 -1 YDYSEDFLCDC 11 157 715.2483391127342 1428.4821252922684 2 715.2483398318291 MULTI CID FTMS 0 0 0 12571 204050.671875 0.2225101409848726 -4 0.36553955078125 14 Carbamidomethyl (C) _YDYSEDFLC(Carbamidomethyl (C))DC_ ENSG00000157578|ENST00000288350|LCA5L 12.240655878213236 0.7805268987462184 4 YYYDGD 6 -1 82.81 0.0 0.0 5.797 0.0 0.0 0.0 649.1952035994478 649.1952035994478 38.15986787688525 0.0 0.0 0.0 0 1.1307196863200843 2.0 1.579689690656103 0.0 YYYDGD 5.797 - 1779 + 1 1.335 389261.1 1.0 7812 4771 12571 HBL1_DMSO_200M_050219_2,12585 HBL1_DMSO_200M_050219_2,12585,YDYSEDFLCDC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12586 67.294 583.0 294380.0 25 0 26666.0 + -1 RQIPVESVPGI 11 170 598.2471870427063 1194.4798211522125 2 598.2463867068291 MULTI CID FTMS 0 0 0 12571 200017.640625 0.7133389756441858 1 -0.1479415893554687 15 Carbamidomethyl (C) _YSAC(Carbamidomethyl (C))AAQMFF_ ENSG00000108773|ENST00000225916|KAT2A;nc|ENSG00000108773|Q92830-2|KAT2A 10.073929032068715 0.6785112666868882 4 [WD]AAQ 5 -1 26.628 0.0 0.0 2.2293 0.0 0.0 0.0 620.2166735294187 620.2166735294187 3.5735731609544708 0.0 0.0 0.0 0 0.3494850021680094 1.0457574905606752 0.0 0.0 [WD]AAQ 2.2293 - 1259 1 1.335 132898.8 1.0 7813 4771 12571 HBL1_DMSO_200M_050219_2,12586 HBL1_DMSO_200M_050219_2,12586,YSACAAQMFF False False RQIPVESVPGI 67.293603 598.246386706829 350930.1875 12571.0 ENSG00000108773|ENST00000225916|KAT2A;;nc|ENSG00000108773|Q92830-2|KAT2A -0.0188590139150619 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12587 67.298 226.0 453680.0 25 0 37400.0 + 9412 IYQIIKEY 8 152 534.8029142345206 1067.591275535841 2 535.3005248904228 MULTI CID FTMS 0 0 0 12571 202964.015625 0.0835896272106529 7 -0.7123641967773438 16 Unmodified _FKEIRYRG_ ENSG00000112175|ENST00000370830|BMP5;nc|ENSG00000112175|P22003-2|BMP5 15.847184025352805 0.6768015514314958 4 [Y{I|L}]Q{I|L}[EP]{I|L} 7 7 24.225 0.0 0.0 2.2691 0.0 0.0 0.0 208.08921421929625 208.08921421929625 3.867099780031886 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}]Q{I|L}[EP]{I|L} 2.2691 - 725 1 1.335 84570.0 1.0 7814 4771 12571 HBL1_DMSO_200M_050219_2,12587 HBL1_DMSO_200M_050219_2,12587,FKEIRYRG False False IYQIIKEY 67.297857 535.300524890423 2098416.75 12571.0 ENSG00000112175|ENST00000370830|BMP5;;nc|ENSG00000112175|P22003-2|BMP5 2.1138061384359994 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12588 67.309 665.0 638900.0 25 0 31700.0 -1 0 182 874.9060810207458 1747.7976091082917 2 875.4056274294853 MULTI CID FTMS 0 0 0 12571 191549.0 0.1986935352106841 -1 0.0387496948242187 17 4 [NP]{I|L}NA[QP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 105.29 0.0 0.0 6.0242 6.0242 75.644 0.0 0.0 0.0 8.527848686805484 3.3547064036788754 3.3547064036788754 1.868580747024069 0 1.9436726795685344 0.9208187539523752 0.3494850021680094 2.341129063296272 [NP]{I|L}NA[QP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NH{[WT]|[RM]}DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NH[RD]MAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGA[QP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA[QP]QDAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA[QP][AG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA[QP]QDAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA[QP]QDAN{I|L}PN{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNH{[WT]|[RM]}DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 6.0242;5.9173;5.5393;5.5363;5.5085;5.5085;5.5085;5.5085;5.4452;5.4294 -;-;-;-;-;-;-;-;-;- 120005 1 1.335 276218.7 1.0 7815 4771 12571 HBL1_DMSO_200M_050219_2,12588 HBL1_DMSO_200M_050219_2,12588, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12589 67.324 800.0 292180.0 25 0 34253.0 -1 0 192 412.79637965492566 823.5782063766513 2 412.7960082888603 MULTI CID FTMS 0 0 0 12571 170650.203125 1.0 0 0.0 18 4 Q{I|L} 2 -1 12.703 0.0 0.0 1.5424 0.0 0.0 0.0 579.4229220025999 579.4229220025999 0.920300943634782 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L} 1.5424 - 149 + 1 1.335 181455.4 0.959999978542328 7816 4771 12571 HBL1_DMSO_200M_050219_2,12589 HBL1_DMSO_200M_050219_2,12589, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12590 67.338 779.0 124140.0 25 0 9902.0 + 29228 QGSGAARG 8 140 703.3508274421638 702.3435509755637 1 703.3500244021416 MULTI CID FTMS 0 0 0 12571 150552.15625 0.7070450179987461 2 -0.2360153198242187 19 Unmodified _QGSGAARG_ REV__ENST00000597275.5_1_X:48911115-48911331:+|nuORF 2.059750862983233 0.8118298629782807 4 EEA{I|L}E{I|L} 6 -1 + 62.239 0.0 0.0 8.8616 8.8616 85.765 0.0 0.0 0.0 3.245687948834977 14.69273760456403 3.245687948834977 3.245687948834977 0 0.8026048219588936 1.154901959985743 1.424742501084005 0.0 EEA{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}AEE{I|L};{[QN]|[E{I|L}]|[KN]}EAE{I|L};EE{I|L}AE{I|L};EEAE{I|L}{I|L};[{I|L}A]EEE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DV]E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[QS]|[NT]}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}DD{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[PG][C(Carbamidomethyl (C))K] 8.8616;8.3995;7.655;6.4918;6.4734;6.1502;5.1233;4.2408;2.7351;2.4765 -;-;-;-;-;-;-;-;-;- 228 1 1.335 75195.5 1.0 7817 4771 12571 HBL1_DMSO_200M_050219_2,12590 HBL1_DMSO_200M_050219_2,12590,QGSGAARG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12591 67.352 800.0 552850.0 25 0 89065.0 + 13949 HYMNPYQLNAY 11 196 707.31566999595 1412.6167870587 2 707.3138305544853 MULTI CID FTMS 0 0 0 12571 140223.734375 0.72347401906408 -1 0.0387496948242187 20 Unmodified _HYMNPYQLNAY_ ENSG00000139117|ENST00000331366|CPNE8 53.832793166522166 0.0964040679835549 4 {[WN]|[YH]}MNPYQ{I|L}NAY 11 0 + 55.703 0.0 0.0 3.9433 3.9433 65.595 0.0 0.0 0.0 0.9691001300805624 4.3640477053967 0.9691001300805624 0.9691001300805624 0 0.805462187404089 1.2218487496163564 0.0 0.2302046884880938 + + {[WN]|[YH]}MNPYQ{I|L}NAY;YYS[QT]YQ{I|L}NAY;YY[C(Carbamidomethyl (C))R]YQ{I|L}NAY;[HD]N{I|L}QYPNSYY;{[WN]|[YH]}MGGPYQ{I|L}NAY;{[WN]|[YH]}MNPYQ{I|L}GGAY;{[WN]|[YH]}MNPY[AG]{I|L}NAY;{[QS]|[NT]}ESNPYQ{I|L}NAY;YYS[QT]Y[AG]{I|L}NAY;YYS[QT]YQ{I|L}GGAY 3.9433;3.8747;3.6223;3.5609;3.2971;3.2971;3.2971;3.2466;3.2285;3.2285 +;-;-;-;-;-;-;-;-;- + 9706 1 1.335 307266.1 0.9800000190734864 7818 4771 12571 HBL1_DMSO_200M_050219_2,12591 HBL1_DMSO_200M_050219_2,12591,HYMNPYQLNAY True True HYMNPYQLNAY 67.35175 707.313830554485 2375681.75 12571.0 ENSG00000139117|ENST00000331366|CPNE8 4.966474215189616 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12593 67.356 2.0 27787000.0 25 0 2977100.0 + 2968 AVIDVGINRV 10 57 528.3139463310985 1054.6133397289968 2 528.3143188357353 MULTI CID FTMS 0 0 0 12592 26053780.0 1.0 0 0.0 1 Unmodified _AVIDVGINRV_ ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2 38.17557092003332 0.1768326257063233 4 {[VA]|[{I|L}G]}{I|L}DVG{I|L} 7 3 65.974 0.0 0.0 6.2557 0.0 0.0 0.0 384.2010286920532 384.2010286920532 38.52645733133485 0.0 0.0 0.0 0 1.274227503252014 2.0 0.0 0.0 + {[VA]|[{I|L}G]}{I|L}DVG{I|L} 6.2557 + + 80 + 1 1.328 49508.8 1.0 7819 4772 12592 HBL1_DMSO_200M_050219_2,12593 HBL1_DMSO_200M_050219_2,12593,AVIDVGINRV False True AVIDVGINRV 67.355929 528.3145 782070528.0 12592.0 nc|ENSG00000065911|P13995-2|MTHFD2;;ENSG00000065911|ENST00000394053|MTHFD2 6.10424009958903 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12594 67.357 4.9 10843000.0 25 0 802390.0 + 13911 HVVEILVET 9 75 519.7947846534107 1037.575016373621 2 519.7952758669853 MULTI CID FTMS 0 0 0 12592 10942347.0 0.8029592314084912 1 -0.08807373046875 2 Unmodified _HVVEILVET_ ENSG00000170779|ENST00000336219|CDCA4 48.345845343767074 0.0439967357579942 4 [HV]VE{I|L}{I|L}V{[ET]|[MV]} 9 0 + 49.376 0.0 0.0 4.7588 4.7588 76.662 0.0 0.0 0.0 10.45757490560674 7.147642715192504 7.147642715192504 6.020599913279625 0 0.3054621874040891 1.3979400086720375 0.0 0.0 + + [HV]VE{I|L}{I|L}V{[ET]|[MV]};[HV]VE{I|L}V{I|L}{[ET]|[MV]};[HV]V{I|L}E{I|L}V{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}VH{I|L}V{[ET]|[MV]};[HV]V{I|L}EV{I|L}{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}VHV{I|L}{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}HVV{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}{I|L}V{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}V{I|L}{[ET]|[MV]} 4.7588;4.1785;4.1785;3.7509;3.5983;3.1706;3.1213;3.1042;2.524 +;-;-;-;-;-;-;-;- + 157 1 1.328 47513.6 1.0 7820 4772 12592 HBL1_DMSO_200M_050219_2,12594 HBL1_DMSO_200M_050219_2,12594,HVVEILVET True True HVVEILVET 67.357108 519.795275866985 585729216.0 12592.0 ENSG00000170779|ENST00000336219|CDCA4 7.138916015625 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12595 67.358 8.4 10276000.0 25 0 2817900.0 + + 31544 RQLEAIVRI 9 61 549.3430630216842 1096.6715731101683 2 549.3433105349541 MULTI CID FTMS 0 0 0 12592 6898112.0 0.724962149771091 -1 0.1479415893554687 3 Unmodified _RQLEAVLLR_ ENST00000493076.5_1_22:35806581-35817581:+|nuORF;ENSG00000100297|ENST00000216122|MCM5 26.020703789607367 0.2001090068861241 4 RQ{I|L}E 4 -1 24.418 0.0 0.0 2.2265 0.0 0.0 0.0 567.3675631158811 567.3675631158811 10.438134727925998 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 RQ{I|L}E 2.2265 + + 39 + 1 1.328 74743.7 1.0 7821 4772 12592 HBL1_DMSO_200M_050219_2,12595 HBL1_DMSO_200M_050219_2,12595,RQLEAVLLR False False RQLEAIVRI 67.358285 549.343310534954 73063994.0 12592.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 4.304816007614136 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12596 67.359 8.4 9104500.0 25 0 1106200.0 + 21918 LPPHIIRL 8 71 320.2117583217455 957.6134455654365 3 320.2113525271416 MULTI CID FTMS 0 0 0 12592 6898614.5 0.910587254022766 2 -0.2007064819335937 4 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 36.12702656103203 0.299085846329477 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 0 + 70.265 0.0 0.0 7.3375 7.3375 85.15 0.0 0.0 0.0 60.800631054269175 8.226825097560429 8.226825097560429 4.771212547196626 0 0.2396518287104437 1.6989700043360187 0.0 0.2742275032520141 + + {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 7.3375;6.8392;6.5249;4.1861 +;-;-;- + 81 + 1 1.328 67398.0 1.0 7822 4772 12592 HBL1_DMSO_200M_050219_2,12596 HBL1_DMSO_200M_050219_2,12596,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12597 67.361 11.0 4092800.0 25 0 382470.0 + 41355 VPKALEPYV 9 72 508.2958858558062 1014.5772187784124 2 508.2954284548759 MULTI CID FTMS 0 0 0 12592 4707751.5 1.0 0 0.0 5 Unmodified _VPKALEPYV_ ENSG00000183434|ENST00000310125|TFDP3;ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1 41.8396318013385 0.0653578398400075 4 [VP]KA{I|L}EPYV 9 0 + 58.259 0.0 0.0 5.7422 5.7422 79.724 0.0 0.0 0.0 12.21848749616356 16.478174818886373 12.21848749616356 4.948500216800937 0 1.0 1.2218487496163564 0.0 0.0 + + [VP]KA{I|L}EPYV;[VP]K[DV]VPYV;[VP]K[DV]PVYV;[VP][WR]VPYV;[VP][WR]PVYV;[VP]K[DV]PYVV;[KP]VA{I|L}EPYV;[VP]K[DV]YPVV;[VP][WR]PYVV;[KP]AV{I|L}EPYV 5.7422;5.2545;5.0584;4.9127;4.7166;4.5656;4.5379;4.2689;4.2238;4.1457 +;-;-;-;-;-;-;-;-;- + 390 1 1.328 39787.8 1.0 7823 4772 12592 HBL1_DMSO_200M_050219_2,12597 HBL1_DMSO_200M_050219_2,12597,VPKALEPYV True True VPKALEPYV 67.360643 508.295428454876 98206072.0 12592.0 ENSG00000198176|ENST00000375370|TFDP1;;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;;nc|ENSG00000198176|Q14186-2|TFDP1;;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;;ENSG00000183434|ENST00000310125|TFDP3 6.176048596700032 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12598 67.362 22.0 3659700.0 25 0 372190.0 + 31541 RQLEAIVRI 9 75 366.5647867305995 1096.6725307919985 3 366.5645019412041 MULTI CID FTMS 0 0 0 12592 2108103.75 0.5565478439617498 -1 0.1479415893554687 6 Unmodified _RQLEAIVRI_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 69.10491478415734 0.0214449631113747 4 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EA{I|L}{I|L}VR 9 2 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L} + + 42.612 13.952 3.5123 3.8856 3.8856 48.305 0.0 0.0 0.0 0.0 24.08030623340529 0.0 0.0 0 1.274227503252014 0.0 0.5 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EA{I|L}{I|L}VR 3.8856 - 123 + 1 1.328 68729.7 1.0 7824 4772 12592 HBL1_DMSO_200M_050219_2,12598 HBL1_DMSO_200M_050219_2,12598,RQLEAIVRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12599 67.363 21.0 2137200.0 25 0 269590.0 + 45099 YPYPYPHTL 9 74 575.7824481621841 1149.550343391168 2 575.7819702029228 MULTI CID FTMS 0 0 0 12592 2088390.875 0.6219737597344835 2 -0.2007064819335937 7 Unmodified _YPYPYPHTL_ ENSG00000116221|ENST00000360840|MRPL37 89.42679046578446 0.015225546354407 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPHT{I|L} 9 0 + 88.126 0.0 0.0 7.6662 7.6662 96.508 0.0 0.0 0.0 67.49159686636801 23.34553029807644 23.34553029807644 59.156687756324686 0 1.6549471895720984 2.0 1.3494850021680094 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPHT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AA{[HG]|PP};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[H{I|L}]{[QN]|[E{I|L}]|[KN]}Y{[QN]|[E{I|L}]|[KN]} 7.6662;2.5201;0.88321 +;-;- + 131 + 1 1.328 42887.6 1.0 7825 4772 12592 HBL1_DMSO_200M_050219_2,12599 HBL1_DMSO_200M_050219_2,12599,YPYPYPHTL True True YPYPYPHTL 67.363 575.781970202923 173513104.0 12592.0 ENSG00000116221|ENST00000360840|MRPL37 9.116483052571615 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12600 67.364 25.0 2406300.0 25 0 379860.0 + + -1 TLITDGMRSV 10 69 546.7908624141253 1091.5671718950505 2 546.7902709841728 MULTI CID FTMS 0 0 0 12592 1878373.875 0.9194458039697786 -1 0.1479415893554687 8 Oxidation (M) _TILVSYHM(Oxidation (M))I_ ENST00000397477.2_1_22:32665833-32665884:+|nuORF;ENSG00000071894|ENST00000616140|CPSF1 21.74664581756881 0.2544899275067181 4 [{I|L}T]{I|L}TD 5 -1 51.466 0.0 0.0 4.7149 0.0 0.0 0.0 545.2521247598623 545.2521247598623 38.36696871556164 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 [{I|L}T]{I|L}TD 4.7149 - 29 + 1 1.328 51528.4 1.0 7826 4772 12592 HBL1_DMSO_200M_050219_2,12600 HBL1_DMSO_200M_050219_2,12600,TILVSYHMI False False TLITDGMRSV 67.364179 546.790270984173 16467253.0 12592.0 ENST00000397477.2_1_22:32665833-32665884:+|nuORF;;ENSG00000071894|ENST00000616140|CPSF1 -0.1081406672795613 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12601 67.366 71.0 955380.0 25 0 140430.0 41250 VPGKVVPL 8 95 404.7684194017362 807.5222858702724 2 404.7682067751884 MULTI CID FTMS 0 0 0 12592 915684.8125 0.1564096101181973 3 -0.2463607788085937 9 Unmodified _VPGKVVPL_ ENSG00000135048|ENST00000377044|CEMIP2;nc|ENSG00000135048|Q9UHN6-2|CEMIP2 28.17323086031832 0.4514957916281387 4 [VP]GVKPV{I|L} 8 3 + 65.839 0.0 0.0 8.1532 8.1532 93.281 0.0 0.0 0.0 22.21848749616356 50.35457533920862 22.21848749616356 9.771212547196626 0 0.8494850021680094 1.5228787452803376 0.0 0.0 [VP]GVKPV{I|L};[VP]GVPKV{I|L};[VP]K[VG]PV{I|L};[VP]KP[VG]V{I|L};[PG]VVKPV{I|L};[VP]KP{I|L}AA{I|L};[KP]V[VG]PV{I|L};[PG]VVPKV{I|L};[KP]VP[VG]V{I|L};[KP]VP{I|L}AA{I|L} 8.1532;6.9432;6.5768;5.2087;4.5811;4.0304;3.5726;3.371;2.2045;1.0262 -;-;-;-;-;-;-;-;-;- 366 1 1.328 57742.3 1.0 7827 4772 12592 HBL1_DMSO_200M_050219_2,12601 HBL1_DMSO_200M_050219_2,12601,VPGKVVPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12602 67.368 82.0 866160.0 25 0 106270.0 + 3633 DADYAIKI 8 91 454.7399449691237 907.4653370050474 2 454.7398254275322 MULTI CID FTMS 0 0 0 12592 915544.5 0.0823262532899676 3 -0.2463607788085937 10 Unmodified _DADYAIKI_ ENSG00000143368|ENST00000271628|SF3B4;ENST00000553618.1_1_14:67665960-67666731:+|nuORF 52.268347100219714 0.1285778651304833 4 {[DA]|[EG]}DYA{I|L}K{I|L} 8 0 + 79.404 0.0 0.0 8.7501 8.7501 84.153 0.0 0.0 0.0 23.098943791441968 2.632414347745822 2.632414347745822 2.632414347745822 0 1.6307196863200843 2.0 0.0 0.2742275032520141 + + {[DA]|[EG]}DYA{I|L}K{I|L};{[DA]|[EG]}DYA{I|L}{I|L}K 8.7501;8.46 +;- + 144 + 1 1.328 57631.3 1.0 7828 4772 12592 HBL1_DMSO_200M_050219_2,12602 HBL1_DMSO_200M_050219_2,12602,DADYAIKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12603 67.369 54.0 525310.0 25 0 46377.0 -1 AVLDLVDQCP 10 60 565.2813317043336 1128.5481104754672 2 565.2823364138603 MULTI CID FTMS 0 0 0 12592 562862.75 0.1415567380115998 -3 0.3345413208007812 11 Carbamidomethyl (C) _AVLDLVDQC(Carbamidomethyl (C))P_ ENSG00000134326|ENST00000256722|CMPK2;nc|ENSG00000134326|Q5EBM0-2|CMPK2;nc|ENSG00000134326|Q5EBM0-3|CMPK2;nc|ENSG00000134326|Q5EBM0-4|CMPK2 10.823927491677226 0.6659270209832991 4 {[VA]|[{I|L}G]}{I|L} 3 -1 25.686 0.0 0.0 2.2761 0.0 0.0 0.0 842.3340961534547 842.3340961534547 8.061799739838872 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[VA]|[{I|L}G]}{I|L} 2.2761 + + 88 1 1.328 27285.5 1.0 7829 4772 12592 HBL1_DMSO_200M_050219_2,12603 HBL1_DMSO_200M_050219_2,12603,AVLDLVDQCP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12604 67.372 164.0 770830.0 25 0 88919.0 + 24421 MGAPALKI 8 105 400.7387401386517 799.4629273441035 2 400.7382995486259 MULTI CID FTMS 0 0 0 12592 541970.375 0.4432584837114049 -1 0.1479415893554687 12 Unmodified _MGAPALKI_ ENSG00000197892|ENST00000524189|KIF13B;nc|ENSG00000197892|Q9NQT8-2|KIF13B 53.57557251787612 0.1224291679108181 4 MGAPA{I|L}K{I|L} 8 0 + 71.144 0.0 0.0 8.899 8.899 91.921 0.0 0.0 0.0 41.69042492554056 12.5190243216651 12.5190243216651 8.927900303521312 0 0.9247425010840048 1.3979400086720375 0.0 0.2614393726401688 + + MGAPA{I|L}K{I|L};MGA{I|L}[PA]K{I|L};MQPA{I|L}K{I|L};MQ{I|L}[PA]K{I|L} 8.899;7.7823;6.7538;5.6371 +;-;-;- + 153 + 1 1.328 104950.3 1.0 7830 4772 12592 HBL1_DMSO_200M_050219_2,12604 HBL1_DMSO_200M_050219_2,12604,MGAPALKI True True MGAPALKI 67.372329 400.738299548626 8157339.0 12592.0 nc|ENSG00000197892|Q9NQT8-2|KIF13B;;ENSG00000197892|ENST00000524189|KIF13B 5.700671990712483 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12605 67.375 138.0 664920.0 25 0 63200.0 + 33087 RTVPVFESV 9 131 516.7863035417422 1031.5580541502843 2 517.2880126833916 MULTI CID FTMS 0 0 0 12592 459717.03125 0.6072059530923702 -3 0.3345413208007812 13 Unmodified _SERTLQLSV_ ENSG00000183751|ENST00000568546|TBL3 18.13498045792455 0.3457906370836843 4 QCT{M(Oxidation (M))|F} 4 8 25.918 0.0 0.0 2.5125 0.0 0.0 0.0 549.3166436192482 549.3166436192482 -2.041492120621044 0.0 -2.041492120621044 0.0 0 0.0 0.0 0.0 0.0 QCT{M(Oxidation (M))|F} 2.5125 - 1577 + 1 1.328 77386.4 1.0 7831 4772 12592 HBL1_DMSO_200M_050219_2,12605 HBL1_DMSO_200M_050219_2,12605,SERTLQLSV False False RTVPVFESV 67.375119 517.288012683392 10080536.0 12592.0 ENSG00000183751|ENST00000568546|TBL3 4.861800988515218 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12606 67.379 180.0 543950.0 25 0 116150.0 + -1 DTMMDSTQEYY 11 106 708.2527810913758 1414.4910092495516 2 708.2520629763603 MULTI CID FTMS 0 0 0 12592 348318.53125 0.674996219638489 -1 0.1479415893554687 14 2 Oxidation (M) _DTM(Oxidation (M))M(Oxidation (M))DSTQEYY_ REV__ENSG00000078674|ENST00000325083|PCM1;REV__nc|ENSG00000078674|Q15154-2|PCM1;REV__nc|ENSG00000078674|Q15154-4|PCM1;REV__nc|ENSG00000078674|Q15154-5|PCM1 17.11289562659939 0.6791789249425932 4 [YN]G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]S[NG]GNYY 12 -1 + 53.85 0.0 0.0 3.807 3.807 67.618 0.0 0.0 0.0 2.272978305734199 15.106664456146284 2.272978305734199 2.272978305734199 0 0.805462187404089 1.3979400086720375 1.066901560044258 0.2887254899964357 [YN]G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]S[NG]GNYY;YY[Y{M(Oxidation (M))|F}][C(Carbamidomethyl (C))C]GNYY;YY[Y{M(Oxidation (M))|F}]C(Carbamidomethyl (C))C(Carbamidomethyl (C))NYY;[MT]GY[PS][C(Carbamidomethyl (C))C]GNYY;[YN]G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]EEGNYY;[YN]G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]MPSNYY;YY[Y{M(Oxidation (M))|F}][DG]D{M(Oxidation (M))|F}YY;[MT]GY{[DA]|[EG]}{M(Oxidation (M))|F}NGNYY;[MT]{M(Oxidation (M))|F}C(Carbamidomethyl (C))V{M(Oxidation (M))|F}NGNYY;[MT]GYC(Carbamidomethyl (C))C(Carbamidomethyl (C))PSNYY 3.807;3.6463;3.1845;3.0997;3.0704;3.0113;3.0075;2.9874;2.8734;2.758 -;-;-;-;-;-;-;-;-;- 1208 1 1.328 74122.1 1.0 7832 4772 12592 HBL1_DMSO_200M_050219_2,12606 HBL1_DMSO_200M_050219_2,12606,DTMMDSTQEYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12607 67.389 588.0 347490.0 25 0 36411.0 + 35337 STALAVPSV 9 95 844.4757983888239 843.4685219222239 1 844.4775268435478 MULTI CID FTMS 0 0 0 12592 260564.140625 0.6355325634834953 -7 0.6563644409179688 15 Unmodified _STALAVPSV_ nc|ENSG00000114125|Q9UBF6-2|RNF7 78.14939416004806 0.0179651292570206 4 C(Carbamidomethyl (C))APAAP[VS] 8 4 48.651 0.0 0.0 5.7679 0.0 0.0 72.12417174873526 0.0 72.12417174873526 0.0 17.218790703979195 0.0 0.0 0 1.5387254899964358 0.0 1.4291746928241125 0.0 C(Carbamidomethyl (C))APAAP[VS] 5.7679 - 2058 + 1 1.328 137801.4 1.0 7833 4772 12592 HBL1_DMSO_200M_050219_2,12607 HBL1_DMSO_200M_050219_2,12607,STALAVPSV True True STALAVPSV 67.388933 844.477526843548 2394638.75 12592.0 nc|ENSG00000114125|Q9UBF6-2|RNF7 1.2456713020801544 1.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12608 67.4 630.0 185960.0 25 0 9368.4 -1 0 134 911.416736359881 1820.818919786562 2 911.4178344607352 MULTI CID FTMS 0 0 0 12592 218384.109375 1.0 0 0.0 16 4 [MN]PD{I|L}DADHSW 11 -1 53.497 0.0 0.0 2.9381 0.0 0.0 0.0 536.2654512994749 536.2654512994749 17.77790839121476 0.0 0.0 0.0 0 0.2614393726401688 1.5228787452803376 0.0 0.0 [MN]PD{I|L}DADHSW 2.9381 - 6663 + 1 1.328 83722.3 1.0 7834 4772 12592 HBL1_DMSO_200M_050219_2,12608 HBL1_DMSO_200M_050219_2,12608, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12609 67.404 234.0 340570.0 25 0 29961.0 + 5909 DPYLSSVSHI 10 123 559.2801899791613 1116.5458270251224 2 559.2800170779228 MULTI CID FTMS 0 0 0 12592 225003.15625 0.6819030396727518 5 -0.4513397216796875 17 Unmodified _DPYLSSVSHI_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 43.85829265575387 0.1168243637355526 4 [DP]Y{M(Oxidation (M))|F} 4 7 33.191 0.0 0.0 2.9727 0.0 0.0 0.0 591.3112438554537 591.3112438554537 20.092503013052934 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.25 0.0 [DP]Y{M(Oxidation (M))|F} 2.9727 - 285 1 1.328 67661.3 1.0 7835 4772 12592 HBL1_DMSO_200M_050219_2,12609 HBL1_DMSO_200M_050219_2,12609,DPYLSSVSHI True True DPYLSSVSHI 67.404341 559.280017077923 3431012.25 12592.0 nc|ENSG00000174953|Q9H2U1-2|DHX36;;ENSG00000174953|ENST00000496811|DHX36;;nc|ENSG00000174953|Q9H2U1-3|DHX36 4.009101231892903 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12610 67.415 634.0 257380.0 25 0 32991.0 + 16445 KAIEELLKEA 10 194 572.3345797969545 1142.6546066607089 2 572.3340942263603 MULTI CID FTMS 0 0 0 12592 193370.53125 0.2966393171807223 1 -0.08807373046875 18 Unmodified _KAIEELLKEA_ nc|ENSG00000186184|P0DPB5|POLR1D 76.41605946988834 0.0187299535364035 4 {[VA]|[{I|L}G]}TAVNK{I|L}KEA 11 6 + 87.187 0.0 0.0 7.6302 7.6302 82.565 0.0 0.0 0.0 3.481362441963327 16.575773191777913 3.481362441963327 2.907797822161584 0 1.1556279041559667 0.9208187539523752 2.288106835214472 0.7614393726401688 {[VA]|[{I|L}G]}TAVNK{I|L}KEA;{[VA]|[{I|L}G]}TAVNK{I|L}EKA;{[TV]|[{I|L}S]}AAVNK{I|L}KEA;{[VA]|[{I|L}G]}TVANK{I|L}KEA;{[TV]|[{I|L}S]}AAVNK{I|L}EKA;{[VA]|[{I|L}G]}TVANK{I|L}EKA;{[VA]|[{I|L}G]}TAVE{I|L}{I|L}KEA;[{I|L}A]SAVNK{I|L}KEA;{[TV]|[{I|L}S]}AVANK{I|L}KEA;{[VA]|[{I|L}G]}TAVGGK{I|L}KEA 7.6302;7.3757;7.3255;7.157;7.071;6.9025;6.8683;6.8616;6.8523;6.8313 -;-;-;-;-;-;-;-;-;- 15126 1 1.328 122573.2 1.0 7836 4772 12592 HBL1_DMSO_200M_050219_2,12610 HBL1_DMSO_200M_050219_2,12610,KAIEELLKEA True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12611 67.427 676.0 183320.0 25 0 39036.0 + -1 CDEFCCFFSAC 11 133 723.2333481961487 1444.4521434590972 2 723.2325927615166 MULTI CID FTMS 0 0 0 12592 154474.4375 0.5349864813471595 -1 0.1479415893554687 19 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))DEFC(Carbamidomethyl (C))CFFSAC(Carbamidomethyl (C))_ REV__ENSG00000113327|ENST00000639213|GABRG2;REV__ENSG00000163285|ENST00000295452|GABRG1;REV__nc|ENSG00000113327|P18507-1|GABRG2;REV__nc|ENSG00000113327|P18507-3|GABRG2 0.3070304955306653 0.8736993455979228 4 YDYYYY 6 -1 27.63 0.0 0.0 1.9128 0.0 0.0 496.0991688459 0.0 496.0991688459 0.0 13.650246977935652 0.0 0.0 0 0.6237125054200234 0.0 1.1549471895720984 0.0 YDYYYY 1.9128 - 225 1 1.328 92125.2 1.0 7837 4772 12592 HBL1_DMSO_200M_050219_2,12611 HBL1_DMSO_200M_050219_2,12611,CDEFCCFFSAC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12612 67.44 658.0 350370.0 25 0 57816.0 -1 SQLPETCIVSC 11 179 647.2943019649 1292.5740509966 2 647.7967407107353 MULTI CID FTMS 0 0 0 12592 155371.125 0.2770125755256963 -2 0.1866912841796875 20 2 Carbamidomethyl (C) _SQLPETC(Carbamidomethyl (C))IVSC(Carbamidomethyl (C))_ ENSG00000188984|ENST00000359318|AADACL3 51.629811660486645 0.1086041609037681 4 {[QS]|[NT]}{I|L}SQ[WC(Carbamidomethyl (C))]{I|L}G{[QS]|[NT]} 11 -1 + 73.368 0.0 0.0 5.6761 5.6761 82.279 0.0 0.0 0.0 8.400447877416582 4.981979378655879 4.981979378655879 7.7815125038364386 0 1.3807196863200843 1.0457574905606752 1.5911290632962718 0.7742275032520141 {[QS]|[NT]}{I|L}SQ[WC(Carbamidomethyl (C))]{I|L}G{[QS]|[NT]};{[QS]|[NT]}{I|L}SQ[WC(Carbamidomethyl (C))]G{I|L}{[QS]|[NT]};[AG]S{I|L}SQ[WC(Carbamidomethyl (C))]{I|L}G{[QS]|[NT]};{[QS]|[NT]}{I|L}S[AG][WC(Carbamidomethyl (C))]{I|L}G{[QS]|[NT]};{[QS]|[NT]}{I|L}[WC(Carbamidomethyl (C))]G{[SA]|[TG]}{I|L}G{[QS]|[NT]};[AG]S{I|L}SQ[WC(Carbamidomethyl (C))]G{I|L}{[QS]|[NT]};{[QS]|[NT]}{I|L}S[AG][WC(Carbamidomethyl (C))]G{I|L}{[QS]|[NT]};[AG]S{I|L}S[AG][WC(Carbamidomethyl (C))]{I|L}G{[QS]|[NT]};{[QS]|[NT]}{I|L}SQEY[HS]{[QS]|[NT]};{[QS]|[NT]}{I|L}SQEP{I|L}[MT]C(Carbamidomethyl (C)) 5.6761;5.0741;5.0262;4.9699;4.518;4.4242;4.3679;4.3223;4.3178;4.2404 -;-;-;-;-;-;-;-;-;- 5142 1 1.328 166703.5 1.0 7838 4772 12592 HBL1_DMSO_200M_050219_2,12612 HBL1_DMSO_200M_050219_2,12612,SQLPETCIVSC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12614 67.444 2.2 18319000.0 25 0 1548400.0 + 8682 EVISKLYAV 9 77 511.30014703097 1020.58574112874 2 511.3005554080009 MULTI CID FTMS 0 0 0 12613 20721126.0 0.4751849084337252 1 -0.1126327514648437 1 Unmodified _EVISKLYAV_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 32.30548876998284 0.1201446275138228 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}SK[Y{I|L}]AV 9 0 + 41.857 0.0 0.0 4.1013 4.1013 82.958 0.0 0.0 0.0 21.126590506049325 2.860980233036159 2.860980233036159 41.857274781860525 0 0.3494850021680094 2.0 0.0 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}{I|L}SK[Y{I|L}]AV 4.1013 + + 131 + 1 1.314 37692.7 1.0 7839 4773 12613 HBL1_DMSO_200M_050219_2,12614 HBL1_DMSO_200M_050219_2,12614,EVISKLYAV True True EVISKLYAV 67.444006 511.300555408001 658815552.0 12613.0 nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 6.4444499015808105 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12615 67.445 4.8 9890100.0 25 0 1411200.0 + 40582 VKPSVPLF 8 64 443.773538906193 885.532524879186 2 443.7735473513603 MULTI CID FTMS 0 0 0 12613 10767559.0 0.6283585852249153 -3 0.2747650146484375 2 Unmodified _VKPSVPLF_ REV__ENSG00000165792|ENST00000339374|METTL17;REV__ENST00000555902.6_1_14:21458708-21463066:+|nuORF;REV__nc|ENSG00000165792|Q9H7H0-2|METTL17;REV__nc|ENSG00000165792|Q9H7H0-3|METTL17 20.453626601364224 0.6087503291685402 4 {I|L}P 2 -1 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3740170977204 672.3740170977204 15.774465702508706 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}P 5.0564 - 144 + 1 1.314 42683.1 1.0 7840 4773 12613 HBL1_DMSO_200M_050219_2,12615 HBL1_DMSO_200M_050219_2,12615,VKPSVPLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12616 67.446 7.0 5357100.0 25 0 730780.0 + 37499 TLGDVFRSL 9 60 504.27999202486376 1006.5454311165277 2 504.2802612185478 MULTI CID FTMS 0 0 0 12613 6692815.0 0.3437312381908133 4 -0.3632659912109375 3 Unmodified _TLGDVFRSL_ REV__ENSG00000155363|ENST00000369645|MOV10;REV__ENST00000468624.5_1_1:113217534-113241292:+|nuORF;REV__ENST00000496577.5_1_1:113231344-113241292:+|nuORF;REV__nc|ENSG00000155363|Q9HCE1-2|MOV10 30.63653989081413 0.1413794767160703 4 [{I|L}T]G[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 9 -1 + 65.908 0.0 0.0 6.5479 6.5479 83.605 0.0 0.0 0.0 5.740312677277188 16.478174818886373 5.740312677277188 5.740312677277188 0 0.5 1.6989700043360187 0.805462187404089 0.0 [{I|L}T]G[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}AS{I|L};{[SA]|[TG]}{I|L}[W{M(Oxidation (M))|F}]{I|L}AS{I|L} 6.5479;5.9776;4.7637 -;-;- 90 1 1.314 35666.5 1.0 7841 4773 12613 HBL1_DMSO_200M_050219_2,12616 HBL1_DMSO_200M_050219_2,12616,TLGDVFRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12617 67.448 15.0 3487000.0 25 0 419770.0 + 37270 TIPEAFRGV 9 60 495.2749607029236 988.5353684726472 2 495.2745544314384 MULTI CID FTMS 0 0 0 12613 2735675.25 0.5738994837123579 -1 0.08807373046875 4 Unmodified _TIPEAFRGV_ ENSG00000213719|ENST00000375784|CLIC1 13.042465956692816 0.4836390050082244 4 [{I|L}T]PEAQV 7 3 55.221 0.0 0.0 5.5862 0.0 0.0 0.0 247.1210116022094 247.1210116022094 34.93070116296984 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}T]PEAQV 5.5862 - 103 + 1 1.314 45763.4 1.0 7842 4773 12613 HBL1_DMSO_200M_050219_2,12617 HBL1_DMSO_200M_050219_2,12617,TIPEAFRGV False True TIPEAFRGV 67.447541 495.274554431438 35905420.0 12613.0 ENSG00000213719|ENST00000375784|CLIC1 3.797732988993327 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12618 67.449 26.0 2430900.0 25 0 370350.0 -1 0 82 457.2658441939189 456.2585677273189 1 457.2660400271416 MULTI CID FTMS 0 0 0 12613 1478897.25 0.222388741325353 3 -0.32794189453125 5 4 [{I|L}P]D{I|L} 4 -1 + 43.188 0.0 0.0 9.4656 9.4656 95.968 0.0 0.0 0.0 6.1928031367991565 19.886831541432315 6.1928031367991565 12.900346113625185 0 0.2742275032520141 1.3010299956639813 0.4247425010840047 0.0 [{I|L}P]D{I|L};[VP]E{I|L};{NN|[MP]|[D{I|L}]|[EV]}P{I|L} 9.4656;6.6382;5.2871 -;-;- 32 1 1.314 56888.0 1.0 7843 4773 12613 HBL1_DMSO_200M_050219_2,12618 HBL1_DMSO_200M_050219_2,12618, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12619 67.45 29.0 1844800.0 25 0 277040.0 + 43602 YAFNMKATV 9 72 522.7624437942544 1043.5103346553087 2 522.7631713747978 MULTI CID FTMS 0 0 0 12613 1475435.75 0.0246738206303194 -3 0.2747650146484375 6 Unmodified _YAFNMKATV_ ENSG00000109971|ENST00000534624|HSPA8 26.268140514670165 0.1969607489560049 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}[EP]TV 9 3 + 54.403 0.0 0.0 5.2134 5.2134 77.753 0.0 0.0 0.0 41.6386121238067 1.7018778256049671 1.7018778256049671 5.255762612236907 0 0.4247425010840047 2.0 0.7302046884880937 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}[EP]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM[KA]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}A[KA]M{[QD]|[EN]|[WG]|[KD]|[RS]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GGM[KA]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV]E[EP]TV;[PS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[MS]|[{M(Oxidation (M))|F}A]}{[CA]|SS}[KA]A{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]} 5.2134;4.7098;4.6169;3.8274;2.883;2.2562;1.2409 -;+;-;-;-;-;- + 206 + 1 1.314 50439.2 1.0 7844 4773 12613 HBL1_DMSO_200M_050219_2,12619 HBL1_DMSO_200M_050219_2,12619,YAFNMKATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12620 67.451 48.0 1122100.0 25 0 139000.0 + 27579 PLDAGFLDTID 11 104 392.8632938459341 1175.5680521380025 3 392.8630859255791 MULTI CID FTMS 0 0 0 12613 1126702.875 1.0 0 0.0 7 Unmodified _PLDAGFLDTID_ REV__ENSG00000112159|ENST00000369393|MDN1 18.1463463914782 0.6576820063886638 4 [DP]{I|L}QQ 5 -1 45.916 0.0 0.0 3.9059 0.0 0.0 0.0 591.2640725686346 591.2640725686346 27.958800173440743 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.5994850021680094 0.0 [DP]{I|L}QQ 3.9059 - 428 1 1.314 48385.9 1.0 7845 4773 12613 HBL1_DMSO_200M_050219_2,12620 HBL1_DMSO_200M_050219_2,12620,PLDAGFLDTID False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12621 67.455 170.0 396520.0 25 0 20178.0 -1 KYYLCFYLFVL 11 84 764.8968457977139 1527.7791386622278 2 764.8983642458916 MULTI CID FTMS 0 0 0 12613 467757.78125 1.0 0 0.0 8 Carbamidomethyl (C) _KYYLC(Carbamidomethyl (C))FYLFVL_ MER57F_dup142|chr6:29552528-29552933:-|5.889111264267852|0.0722232426967899|6.35|48.0|19|3|sense 9.38312468134398 0.8308777417566128 4 {[QS]|[NT]}GV[WR]PSQSANV{I|L} 14 -1 + 106.39 0.0 0.0 6.9639 6.9639 78.901 0.0 0.0 0.0 1.7609125905568137 16.667853209646168 1.7609125905568137 1.7609125905568137 0 0.6505149978319906 0.0 2.322682509756042 1.174742501084005 {[QS]|[NT]}GV[WR]PSQSANV{I|L};{[SA]|[TG]}GGV[WR]PSQSANV{I|L};{[NV]|[RG]}AS[WR]PSQSANV{I|L};{[QG]|[NA]}SV[WR]PSQSANV{I|L};{[SA]|[TG]}NV[WR]PSQSANV{I|L};{[QG]|[NA]}VS[WR]PSQSANV{I|L};{[QS]|[NT]}GV[WR]PS[AG]SANV{I|L};{[QS]|[NT]}GV[WR]PSQSAGGV{I|L};[KG]{[DA]|[EG]}[WR]PSQSANV{I|L};{[NV]|[RG]}A[WK]DPSQSANV{I|L} 6.9639;6.8487;6.7326;6.7326;6.6888;6.4203;6.3715;6.3715;6.3465;6.2751 -;-;-;-;-;-;-;-;-;- 1262 1 1.314 53023.6 1.0 7846 4773 12613 HBL1_DMSO_200M_050219_2,12621 HBL1_DMSO_200M_050219_2,12621,KYYLCFYLFVL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 12622 67.462 411.0 344170.0 25 0 16637.0 + 15493 IPSTELAKQVI 11 157 599.8561795232403 1197.6978061132804 2 599.8563110232353 MULTI CID FTMS 0 0 0 12613 451180.90625 0.8164728490817402 -1 0.08807373046875 9 Unmodified _IPSTELAKQVI_ ENSG00000099341|ENST00000215071|PSMD8 135.71846124360977 0.0457900930205369 4 {I|L}PSTE{I|L}AKQV{I|L} 11 0 + 110.15 0.0 0.0 9.1971 9.1971 92.43 0.0 0.0 0.0 40.57735628590885 14.190166918179614 14.190166918179614 9.128498242810991 0 3.004432191740108 2.0 0.6139829889124311 0.6861818737241735 + + {I|L}PSTE{I|L}AKQV{I|L};{I|L}PSTE{I|L}AK[AG]V{I|L};{I|L}PSTE{I|L}AKQ{I|L}V;[PS]TE{I|L}A{I|L}KN{I|L}{I|L};[PS]TE{I|L}A{I|L}KQV{I|L};[VG]EE{I|L}A{I|L}KN{I|L}{I|L};{I|L}P[WM]{I|L}AKQV{I|L};[PS]TE{I|L}AKQV{I|L}{I|L};[VG]EE{I|L}A{I|L}KQV{I|L};{I|L}PSTE{I|L}AK[{I|L}V]Q 9.1971;8.4349;7.9955;7.885;7.6576;7.6487;7.555;7.4975;7.4212;7.3872 +;-;-;-;-;-;-;-;-;- + 33364 + 1 1.314 105586.0 1.0 7847 4773 12613 HBL1_DMSO_200M_050219_2,12622 HBL1_DMSO_200M_050219_2,12622,IPSTELAKQVI True True IPSTELAKQVI 67.461891 599.856311023235 14160567.0 12613.0 ENSG00000099341|ENST00000215071|PSMD8 4.689111312230428 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12623 67.463 56.0 1083500.0 25 0 127950.0 22467 LPVGPAEPSL 10 71 490.2755161945867 978.5364794559734 2 490.2751647830009 MULTI CID FTMS 0 0 0 12613 384921.625 0.675004597761115 -2 0.2360153198242187 10 Unmodified _LPVGPAEPSL_ ENST00000379644.8_2_8:43055194-43055551:+|nuORF 14.838274106304384 0.5985701837916485 4 {I|L}PVS 4 6 50.662 0.0 0.0 5.1773 0.0 0.0 0.0 579.2752169244749 579.2752169244749 36.68243764792422 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 {I|L}PVS 5.1773 - 109 + 1 1.314 52877.8 1.0 7848 4773 12613 HBL1_DMSO_200M_050219_2,12623 HBL1_DMSO_200M_050219_2,12623,LPVGPAEPSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12624 67.471 454.0 288660.0 25 0 30792.0 + 35090 SQVEQQQLITV 11 141 636.843657862037 1271.672762790874 2 636.8419067263603 MULTI CID FTMS 0 0 0 12613 370022.4375 0.8363028051878707 -2 0.2360153198242187 11 Unmodified _SQVEQQQLITV_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF 79.42699986076722 0.0080827643292781 4 {[TV]|[{I|L}S]}NEQQQ{I|L}{I|L}TV 11 2 + 87.775 0.0 0.0 6.9023 6.9023 80.133 0.0 0.0 0.0 2.485838556906643 58.32552081217971 2.485838556906643 2.552503483520028 0 1.1069758080123702 1.5228787452803376 1.579689690656103 0.75 {[TV]|[{I|L}S]}NEQQQ{I|L}{I|L}TV;[AG]SVEQQQ{I|L}{I|L}TV;{[QS]|[NT]}VEQQQ{I|L}{I|L}TV;{M(Oxidation (M))|F}A{I|L}{I|L}QQQ[DN]PV;{M(Oxidation (M))|F}A{I|L}{I|L}QQQEQ[PA];{M(Oxidation (M))|F}A{I|L}{I|L}QSD{I|L}Q[HT];{M(Oxidation (M))|F}A{I|L}{I|L}QQQE[PA]Q;{[TV]|[{I|L}S]}NEQQ[AG]{I|L}{I|L}TV;{[TV]|[{I|L}S]}NEQ[AG]Q{I|L}{I|L}TV;{[TV]|[{I|L}S]}NE[AG]QQ{I|L}{I|L}TV 6.9023;6.7016;6.6459;6.3794;6.2645;6.2489;6.2413;6.1845;6.1845;6.1845 -;-;+;-;-;-;-;-;-;- + 14189 1 1.314 102257.0 1.0 7849 4773 12613 HBL1_DMSO_200M_050219_2,12624 HBL1_DMSO_200M_050219_2,12624,SQVEQQQLITV True True SQVEQQQLITV 67.471376 636.84190672636 3814603.0 12613.0 ENSG00000156802|ENST00000287394|ATAD2;;ENST00000517666.5_1_8:124333376-124408650:-|nuORF 6.971787929534912 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12625 67.475 204.0 772910.0 25 0 103130.0 + 39206 TYSEFAREL 9 131 558.2716975375329 1114.5288421418657 2 558.2728759646416 MULTI CID FTMS 0 0 0 12613 262821.125 0.0722093041545654 -4 0.4226150512695312 12 Unmodified _TYSEFAREL_ nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1 55.50274090549119 0.0285720310785888 4 TYSE{M(Oxidation (M))|F}KPM{I|L} 9 3 + 92.107 0.0 0.0 8.2642 8.2642 93.492 0.0 0.0 0.0 75.11230030668848 12.09614293199344 12.09614293199344 9.842757820673016 0 0.805462187404089 2.0 0.75 0.0 TYSE{M(Oxidation (M))|F}KPM{I|L};TYSE{M(Oxidation (M))|F}A{[RE]|[WV]}{I|L};TY{I|L}C{M(Oxidation (M))|F}KPM{I|L};TYSE{M(Oxidation (M))|F}A[W{I|L}]V;TYS{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPM{I|L};TY{I|L}{M(Oxidation (M))|F}CKPM{I|L};TYSE{M(Oxidation (M))|F}K{[QG]|[NA]}GV;TYS{I|L}[YQ]PM{I|L};TY{I|L}S{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPM{I|L};TY{I|L}S[YQ]PM{I|L} 8.2642;7.3811;6.9796;6.8207;6.5818;6.5515;6.4074;6.132;5.9919;5.8339 -;+;-;-;-;-;-;-;-;- + 1382 + 1 1.314 121201.2 1.0 7850 4773 12613 HBL1_DMSO_200M_050219_2,12625 HBL1_DMSO_200M_050219_2,12625,TYSEFAREL True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12626 67.484 521.0 431970.0 25 0 39167.0 + + 8842 KTYEAALETI 10 203 569.8024495370894 1137.590346140979 2 569.8034545779228 MULTI CID FTMS 0 0 0 12613 253037.015625 0.2639982390085238 -1 0.08807373046875 13 Unmodified _EYVSGKIETL_ ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11;ENST00000585265.1_1_17:30807457-30807646:+|nuORF 82.5293158979368 0.0149949422200525 4 {[QN]|[E{I|L}]|[KN]}AAHAA{I|L}ET{I|L} 11 -1 + 87.317 0.0 0.0 7.6756 7.6756 79.048 0.0 0.0 0.0 0.8099147221229828 12.468795006754746 0.8099147221229828 0.8099147221229828 0 1.2302046884880935 1.5228787452803376 2.423877368056628 0.0 {[QN]|[E{I|L}]|[KN]}AAHAA{I|L}ET{I|L};[YE]ATKA{I|L}ET{I|L};[YE]AATK{I|L}ET{I|L};[YE]ATAK{I|L}ET{I|L};[YE]TAKA{I|L}ET{I|L};[YE]TAAK{I|L}ET{I|L};[{I|L}T]ECAK{M(Oxidation (M))|F}{I|L}T{I|L};[YT]EAKA{I|L}ET{I|L};[YE]TKAA{I|L}ET{I|L};[YT]EAAK{I|L}ET{I|L} 7.6756;7.6044;7.5254;7.4906;7.4094;7.2956;7.15;7.1448;7.0836;7.031 -;-;-;-;-;-;-;-;-;- 15713 1 1.314 169713.0 1.0 7851 4773 12613 HBL1_DMSO_200M_050219_2,12626 HBL1_DMSO_200M_050219_2,12626,EYVSGKIETL False False KTYEAALETI 67.484455 569.803454577923 5854153.5 12613.0 ENSG00000108671|ENST00000261712|PSMD11;;nc|ENSG00000108671|O00231-2|PSMD11;;ENST00000585265.1_1_17:30807457-30807646:+|nuORF 5.721789677937825 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12627 67.494 554.0 766120.0 25 0 107440.0 + 25217 MVADRFSEL 9 230 534.2631464089263 1066.5117398846526 2 534.2621948122978 MULTI CID FTMS 0 0 0 12613 235505.734375 0.0369271776743563 -2 0.2360153198242187 14 Unmodified _MVADRFSEL_ ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 70.33199760932243 0.0209706178985989 4 MVADR{M(Oxidation (M))|F}ES{I|L} 9 2 + 72.668 0.0 0.0 6.8136 6.8136 84.434 0.0 0.0 0.0 36.478174818886366 5.563025007672877 5.563025007672877 5.563025007672877 0 1.3979400086720375 2.0 1.079689690656103 0.3054621874040891 MVADR{M(Oxidation (M))|F}ES{I|L};MVADR{M(Oxidation (M))|F}ETV;MVADR{M(Oxidation (M))|F}E{I|L}S;MV{I|L}{M(Oxidation (M))|F}GVEC(Carbamidomethyl (C)){I|L};MV{I|L}{M(Oxidation (M))|F}GD{I|L}C(Carbamidomethyl (C)){I|L};MVAD[{M(Oxidation (M))|F}V]{I|L}C(Carbamidomethyl (C)){I|L};MV{I|L}{M(Oxidation (M))|F}GDWS{I|L};MVAD[{M(Oxidation (M))|F}V]WS{I|L};MV{I|L}{M(Oxidation (M))|F}[QT]ES{I|L};MV{I|L}{M(Oxidation (M))|F}G[TA]ES{I|L} 6.8136;6.292;6.1749;5.9459;5.9459;5.8352;5.7737;5.663;5.519;5.4761 -;-;-;-;-;-;-;-;-;- 9306 + 1 1.314 318753.5 1.0 7852 4773 12613 HBL1_DMSO_200M_050219_2,12627 HBL1_DMSO_200M_050219_2,12627,MVADRFSEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12628 67.499 235.0 916340.0 25 0 64014.0 + 39420 VALLVGEKV 9 168 464.297485016023 926.580417098846 2 464.2975646853447 MULTI CID FTMS 0 0 0 12613 216603.25 0.1600806229599911 -2 0.2360153198242187 15 Unmodified _VALLVGEKV_ ENSG00000136819|ENST00000372447|C9orf78;ENST00000461762.5_1_9:132595912-132596119:-|nuORF 46.0223103267499 0.0490911897871712 4 VA{I|L}{I|L}VGEKV 9 0 + 84.136 0.0 0.0 9.0803 9.0803 97.182 0.0 0.0 0.0 61.740439411876224 11.748521869401316 11.748521869401316 21.242165402865 0 1.3494850021680094 1.5228787452803376 0.9163865622122672 0.1505149978319906 + + VA{I|L}{I|L}VGEKV;VA{I|L}{I|L}VG{[VA]|[{I|L}G]}SV;VA{I|L}{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]}SV;{I|L}{I|L}A[WR][R{I|L}] 9.0803;6.7878;6.7464;0.96509 +;-;-;- + 2215 + 1 1.314 166412.4 1.0 7853 4773 12613 HBL1_DMSO_200M_050219_2,12628 HBL1_DMSO_200M_050219_2,12628,VALLVGEKV True True VALLVGEKV 67.498578 464.297564685345 22718000.0 12613.0 ENST00000461762.5_1_9:132595912-132596119:-|nuORF;;ENSG00000136819|ENST00000372447|C9orf78 5.402976195017497 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12629 67.512 796.0 311830.0 25 0 26484.0 + 25005 MPPPVGMV 8 220 414.21211229833 826.40967166346 2 414.2116271853447 MULTI CID FTMS 0 0 0 12613 170120.28125 0.4924592126802538 -5 0.4891128540039062 16 Unmodified _MPPPVGMV_ ENSG00000084070|ENST00000372718|SMAP2;nc|ENSG00000084070|Q8WU79-2|SMAP2;nc|ENSG00000084070|Q8WU79-3|SMAP2 17.086550045450526 0.6584923310065985 4 [VP]GPMPMV 8 4 + 32.221 0.0 0.0 3.8989 3.8989 70.31 0.0 0.0 0.0 10.870323842956754 7.474250108400472 7.474250108400472 3.52182518111362 0 0.4876954943324545 1.0 0.0 0.0 [VP]GPMPMV;[VP]PGMPMV;[VP]GPPMMV;[VP]SQ{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{NN|[MP]|[D{I|L}]|[EV]}PRPMV;[VP]PGPMMV;[VP]{I|L}{[QS]|[NT]}{[{M(Oxidation (M))|F}H]|[RQ]};[VP]PPGMMV;[VP]G{[SA]|[TG]}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[HG]|PP}MRPMV 3.8989;3.4728;3.0031;2.8942;2.5836;2.5769;2.3912;2.2126;2.1913;1.862 -;-;-;-;-;-;-;-;-;- 341 1 1.314 192310.4 1.0 7854 4773 12613 HBL1_DMSO_200M_050219_2,12629 HBL1_DMSO_200M_050219_2,12629,MPPPVGMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12630 67.527 800.0 369820.0 25 0 46174.0 + 20437 LLIGHLERV 9 239 350.553998396159 1048.640165788677 3 350.5535461306572 MULTI CID FTMS 0 0 0 12613 165916.625 0.7046395268898261 -1 0.08807373046875 17 Unmodified _LLIGHLERV_ ENSG00000155561|ENST00000285968|NUP205 27.088373467376528 0.1865245257266215 4 {I|L}{I|L}{I|L}GH{I|L}ERV 9 0 + 88.833 0.0 0.0 8.4712 8.4712 85.088 0.0 0.0 0.0 71.40979982075812 14.09256854528806 14.09256854528806 3.132728295135649 0 0.4173965566627022 2.0 0.0 0.3054621874040891 + + {I|L}{I|L}{I|L}GH{I|L}ERV;{I|L}{I|L}{I|L}GH{I|L}REV;{I|L}{I|L}VAH{I|L}ERV;{I|L}{I|L}VAH{I|L}REV;{I|L}{I|L}{I|L}GHV[W{I|L}]V;{I|L}{I|L}{I|L}GH{I|L}RD{I|L};{I|L}{I|L}{I|L}V[HA]ERV;{I|L}{I|L}{I|L}GVH[W{I|L}]V;{I|L}{I|L}{I|L}V[HA]REV;{I|L}{I|L}VAHV[W{I|L}]V 8.4712;8.1725;7.7249;7.4262;7.0584;6.9911;6.9744;6.7713;6.6757;6.6034 +;-;-;-;-;-;-;-;-;- + 1433 + 1 1.314 237293.4 0.9300000071525574 7855 4773 12613 HBL1_DMSO_200M_050219_2,12630 HBL1_DMSO_200M_050219_2,12630,LLIGHLERV False True LLIGHLERV 67.527314 350.553546130657 2033322.125 12613.0 ENSG00000155561|ENST00000285968|NUP205 6.494907061258952 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12631 67.529 47.0 1417300.0 25 0 188080.0 -1 TLNGSAARTCG 11 85 554.2618487379431 1106.509144542686 2 554.2617675662041 MULTI CID FTMS 0 0 0 12613 156866.734375 0.0056962543878448 -3 0.2747650146484375 18 Carbamidomethyl (C) _TLNGSAARTC(Carbamidomethyl (C))G_ ENSG00000007908|ENST00000333360|SELE 19.361941925380144 0.6323962752489956 4 {[QS]|[NT]}{I|L}P{I|L} 5 -1 32.766 0.0 0.0 2.9612 0.0 0.0 0.0 565.1750130331735 565.1750130331735 19.6669877129645 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.9049471895720984 0.3054621874040891 {[QS]|[NT]}{I|L}P{I|L} 2.9612 - 151 1 1.314 56448.9 1.0 7856 4773 12613 HBL1_DMSO_200M_050219_2,12631 HBL1_DMSO_200M_050219_2,12631,TLNGSAARTCG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12632 67.541 690.0 328000.0 25 0 27139.0 + 3485 CKAKSRPEGP 10 244 536.7822047610026 1071.5498565888051 2 536.7815429568291 MULTI CID FTMS 0 0 0 12613 162218.875 1.0 0 0.0 19 Unmodified _CKAKSRPEGP_ REV__ENST00000549275.5_2_12:49717501-49718035:+|nuORF 13.614867670302877 0.6190977555336379 4 P{M(Oxidation (M))|F}TGP 5 -1 20.621 0.0 0.0 1.9244 0.0 0.0 554.2819691388687 0.0 554.2819691388687 0.0 1.068781008931488 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 P{M(Oxidation (M))|F}TGP 1.9244 - 3433 1 1.314 176163.6 1.0 7857 4773 12613 HBL1_DMSO_200M_050219_2,12632 HBL1_DMSO_200M_050219_2,12632,CKAKSRPEGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12633 67.552 678.0 243710.0 25 0 16891.0 + 8824 EYLEKALEY 9 181 579.2894485058466 1156.5643440784931 2 579.2904540896416 MULTI CID FTMS 0 0 0 12613 161163.0 0.7047985863073224 -1 0.08807373046875 20 Unmodified _EYLEKALEY_ ENSG00000136699|ENST00000680298|SMPD4;ENST00000438378.2_1_2:132275414-132277996:+|nuORF;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;nc|ENSG00000136699|Q9NXE4-10|SMPD4;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4-5|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;nc|ENSG00000136699|Q9NXE4-7|SMPD4;nc|ENSG00000136699|Q9NXE4-8|SMPD4;nc|ENSG00000136699|Q9NXE4-9|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4 66.45667989310934 0.0225072657982126 4 [YE]{I|L}ERREY 8 3 + 63.426 0.0 0.0 5.484 5.484 87.008 0.0 0.0 0.0 33.28947084412127 10.18811639681639 10.18811639681639 18.570332834906424 0 1.0356668758921828 2.0 1.3684151806525389 0.0 [YE]{I|L}ERREY;[YE]{I|L}{M(Oxidation (M))|F}Y{I|L}NPV;[Y{I|L}]EERREY;[YE]{I|L}[KA]E{I|L}EY;{[QN]|[E{I|L}]|[KN]}KAY{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))N];{[QN]|[E{I|L}]|[KN]}AKY{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))N];{[QN]|[E{I|L}]|[KN]}KAEY{I|L}EY;{[QN]|[E{I|L}]|[KN]}AKEY{I|L}EY;{[QN]|[E{I|L}]|[KN]}KAE{I|L}YEY;{[QN]|[E{I|L}]|[KN]}AKE{I|L}YEY 5.484;3.8784;3.8617;3.8544;3.6847;3.6405;3.5965;3.5523;3.4138;3.3696 -;-;-;-;-;-;-;-;-;- 2608 + 1 1.314 124235.0 1.0 7858 4773 12613 HBL1_DMSO_200M_050219_2,12633 HBL1_DMSO_200M_050219_2,12633,EYLEKALEY True True EYLEKALEY 67.552384 579.290454089642 1404047.375 12613.0 ENST00000438378.2_1_2:132275414-132277996:+|nuORF;;nc|ENSG00000136699|Q9NXE4-9|SMPD4;;nc|ENSG00000136699|Q9NXE4-4|SMPD4;;nc|ENSG00000136699|Q9NXE4-5|SMPD4;;nc|ENSG00000136699|Q9NXE4-3|SMPD4;;nc|ENSG00000136699|Q9NXE4-8|SMPD4;;ENSG00000136699|ENST00000680298|SMPD4;;nc|ENSG00000136699|Q9NXE4-7|SMPD4;;nc|ENSG00000136699|Q9NXE4-6|SMPD4;;nc|ENSG00000136699|Q9NXE4-2|SMPD4;;ENST00000482171.5_1_2:130910130-130912221:-|nuORF;;nc|ENSG00000136699|Q9NXE4|SMPD4;;nc|ENSG00000136699|Q9NXE4-10|SMPD4 6.974571704864502 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12635 67.557 3.6 11373000.0 25 0 1702700.0 + 21817 LPNLSSLTL 9 65 479.2845797869575 956.554606640715 2 479.2846862673759 MULTI CID FTMS 0 0 0 12634 15105495.0 1.0 0 0.0 1 Unmodified _LPNLSSLTL_ ENSG00000178732|ENST00000692618|GP5 34.10243960390752 0.1078313939113124 4 [{I|L}P][NS]{I|L}S 6 4 38.403 0.0 0.0 4.0147 0.0 0.0 0.0 342.2033852874525 342.2033852874525 16.21880122504047 0.0 0.0 0.0 0 0.0 2.0 1.174742501084005 0.0 [{I|L}P][NS]{I|L}S 4.0147 - 154 1 1.303 38779.6 1.0 7859 4774 12634 HBL1_DMSO_200M_050219_2,12635 HBL1_DMSO_200M_050219_2,12635,LPNLSSLTL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12636 67.558 5.9 7392400.0 25 0 382150.0 -1 RCHRRRRRCCC 11 53 866.9066694051579 1731.7987858771155 2 866.9079467654228 MULTI CID FTMS 0 0 0 12634 7553474.5 0.5366814310511062 2 -0.2153091430664062 2 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 4 [MN]PN{I|L}NADRHMN{I|L} 13 -1 81.86 0.0 0.0 4.7269 0.0 0.0 0.0 208.07366357974848 208.07366357974848 62.15414469594545 0.0 0.0 0.0 0 0.9177353201839438 1.5228787452803376 0.0 0.8494850021680094 [MN]PN{I|L}NADRHMN{I|L} 4.7269 - 444 + 1 1.303 36293.2 1.0 7860 4774 12634 HBL1_DMSO_200M_050219_2,12636 HBL1_DMSO_200M_050219_2,12636,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12637 67.559 4.9 4788300.0 25 0 715520.0 -1 EMCFDNQVSL 10 47 621.7597889825445 1241.5050250318889 2 621.7606078982353 MULTI CID FTMS 0 0 0 12634 10445615.0 0.9213417191515336 1 -0.045654296875 3 Carbamidomethyl (C) _EMC(Carbamidomethyl (C))FDNQVSL_ ENSG00000166535|ENST00000299698|A2ML1;nc|ENSG00000166535|A8K2U0-2|A2ML1 8.745405648335112 0.6861838735306406 4 S{I|L} 2 -1 29.222 0.0 0.0 2.3537 0.0 0.0 1023.3777647553248 0.0 1023.3777647553248 0.0 13.02378753635658 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 S{I|L} 2.3537 + + 17 + 1 1.303 25930.5 1.0 7861 4774 12634 HBL1_DMSO_200M_050219_2,12637 HBL1_DMSO_200M_050219_2,12637,EMCFDNQVSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12638 67.56 8.2 4561000.0 25 0 1388700.0 + 45707 YYDGDVGNYYY 11 49 696.2747061106709 1390.5348592881417 2 696.2754394412041 MULTI CID FTMS 0 0 0 12634 6280193.5 0.8098944777408715 1 -0.045654296875 4 Unmodified _YYDGDVGNYYY_ ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF 13.90604991867851 0.7458848613461305 4 YYD 3 8 24.437 0.0 0.0 1.7574 0.0 0.0 0.0 946.3587172805824 946.3587172805824 7.983324797206279 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + YYD 1.7574 + + 84 1 1.303 33847.8 1.0 7862 4774 12634 HBL1_DMSO_200M_050219_2,12638 HBL1_DMSO_200M_050219_2,12638,YYDGDVGNYYY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12639 67.561 17.0 2538000.0 25 0 486860.0 + 36209 SVWTKVEGV 9 68 502.77489071528754 1003.5352284973752 2 502.7748901247978 MULTI CID FTMS 0 0 0 12634 2626194.5 1.0 0 0.0 5 Unmodified _SVWTKVEGV_ ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-3|SBNO1 30.63653989081413 0.1413794767160703 4 [VS][R{M(Oxidation (M))|F}]VKE 7 6 53.843 0.0 0.0 5.3653 0.0 0.0 0.0 155.0621279352172 155.0621279352172 4.654368285126935 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.7059771852360797 0.8494850021680094 [VS][R{M(Oxidation (M))|F}]VKE 5.3653 - 209 + 1 1.303 37128.1 1.0 7863 4774 12634 HBL1_DMSO_200M_050219_2,12639 HBL1_DMSO_200M_050219_2,12639,SVWTKVEGV False True SVWTKVEGV 67.561363 502.774890124798 23732924.0 12634.0 nc|ENSG00000139697|A3KN83-3|SBNO1;;ENSG00000139697|ENST00000602398|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1 4.739332358042399 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12640 67.563 38.0 2056600.0 25 0 193020.0 + 22585 LPYAVGKL 8 82 430.7658794621535 859.517205991107 2 430.7657958865166 MULTI CID FTMS 0 0 0 12634 1771082.5 0.7757619200768104 -1 0.1126327514648437 6 Unmodified _LPYAVGKL_ ENSG00000165934|ENST00000298875|CPSF2 53.57557251787612 0.1224291679108181 4 {I|L}PYAVGK{I|L} 8 0 + 75.897 0.0 0.0 8.8302 8.8302 96.95 0.0 0.0 0.0 38.2723722827955 11.84955642535897 11.84955642535897 21.80523450795789 0 0.9802046884880936 1.3979400086720375 0.0 0.0 + + {I|L}PYAVGK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}AVGK{I|L};{I|L}PYN{I|L}K{I|L};{I|L}{I|L}{M(Oxidation (M))|F}N{I|L}K{I|L} 8.8302;6.2933;5.7508;3.2139 +;-;-;- + 283 + 1 1.303 66354.0 1.0 7864 4774 12634 HBL1_DMSO_200M_050219_2,12640 HBL1_DMSO_200M_050219_2,12640,LPYAVGKL True True LPYAVGKL 67.562542 430.765795886517 13842816.0 12634.0 ENSG00000165934|ENST00000298875|CPSF2 5.415497461954753 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12641 67.564 27.0 1688700.0 25 0 226590.0 + 30411 RAYPAAITI 9 55 488.28639267948256 0 488.2850829958916 PEAK CID FTMS 0 0 0 12634 1773708.875 1.0 0 0.0 7 Unmodified _RAYPAAITI_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 15.847184025352805 0.2451986057151378 4 {I|L}A 2 8 12.959 0.0 0.0 1.3297 0.0 0.0 232.14440461823023 555.2691744440061 787.4135790622363 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}A 1.3297 - 58 + 1 1.303 44487.0 1.0 7865 4774 12634 HBL1_DMSO_200M_050219_2,12641 HBL1_DMSO_200M_050219_2,12641,RAYPAAITI False True RAYPAAITI 67.563721 488.285082995892 13958792.0 12634.0 nc|ENSG00000104517|O95071-2|UBR5;;ENSG00000104517|ENST00000520539|UBR5 -0.043893814086914 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12642 67.565 36.0 1152400.0 25 0 94614.0 + 5704 DPIVNRWYN 9 82 588.7908219485089 1175.5670909638177 2 588.7913696169853 MULTI CID FTMS 0 0 0 12634 1604582.875 0.9376116533645562 1 -0.045654296875 8 Unmodified _DPIVNRWYN_ REV__ENSG00000038002|ENST00000264595|AGA;REV__ENST00000506853.5_1_4:178355638-178363529:-|nuORF;REV__ENST00000510955.5_1_4:178358517-178361430:-|nuORF 36.12702656103203 0.0967173616627612 4 DP{I|L}QQ{I|L} 6 -1 86.675 0.0 0.0 7.3731 0.0 0.0 0.0 478.1805208795532 478.1805208795532 72.45178508827502 0.0 0.0 0.0 0 2.274227503252014 2.0 0.0 0.8807196863200843 DP{I|L}QQ{I|L} 7.3731 - 425 + 1 1.303 39486.3 1.0 7866 4774 12634 HBL1_DMSO_200M_050219_2,12642 HBL1_DMSO_200M_050219_2,12642,DPIVNRWYN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12643 67.566 36.0 1697200.0 25 0 142950.0 + 25015 MPQIETRVI 9 73 543.802475914173 1085.590398895146 2 543.8027221560478 MULTI CID FTMS 0 0 0 12634 1597066.625 0.7534094542337593 -2 0.2007064819335937 9 Unmodified _MPQIETRVI_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 35.61225514009592 0.0995432151795903 4 MPQ{I|L}E 5 4 75.745 0.0 0.0 6.9773 0.0 0.0 0.0 484.2902545138625 484.2902545138625 52.27752226111541 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.4247425010840047 0.805462187404089 + MPQ{I|L}E 6.9773 + + 58 + 1 1.303 55645.1 1.0 7867 4774 12634 HBL1_DMSO_200M_050219_2,12643 HBL1_DMSO_200M_050219_2,12643,MPQIETRVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12644 67.568 69.0 2069900.0 25 0 349590.0 + 43606 YAFNMKATV 9 75 1044.51784448126 1043.51056801466 1 1044.519335925579 MULTI CID FTMS 0 0 0 12634 1168490.375 0.2885295176338113 -2 0.2007064819335937 10 Unmodified _YAFNMKATV_ ENSG00000109971|ENST00000534624|HSPA8 72.96794272382148 0.0199516581995792 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AYMKATV 9 4 + 84.659 0.0 0.0 8.1129 8.1129 82.107 0.0 0.0 0.0 1.9453781259591096 16.478174818886373 1.9453781259591096 1.9453781259591096 0 0.9247425010840048 0.0 0.8494850021680094 1.2302046884880935 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AYMKATV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NMKATV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}KATV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}MS{M(Oxidation (M))|F}KATV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}AMYKATV;[MN]{M(Oxidation (M))|F}S{M(Oxidation (M))|F}KATV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}MAYKATV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GGMKATV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[MN]{M(Oxidation (M))|F}KATV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}MKAYATV 8.1129;7.9264;7.3153;7.1466;6.5311;6.4008;6.3624;6.2721;5.8833;5.2663 -;+;-;-;-;-;-;-;-;- + 1615 1 1.303 100467.4 1.0 7868 4774 12634 HBL1_DMSO_200M_050219_2,12644 HBL1_DMSO_200M_050219_2,12644,YAFNMKATV True True YAFNMKATV 67.567761 1044.51933592558 1702105240.0 12634.0 ENSG00000109971|ENST00000534624|HSPA8 9.265165646870932 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12645 67.569 26.0 1535200.0 25 0 213670.0 + 3617 DADGHFHLI 9 73 512.746041986862 1023.477531040524 2 512.7465698122978 MULTI CID FTMS 0 0 0 12634 1146237.625 0.4512447649875161 -2 0.2007064819335937 11 Unmodified _DADGHFHLI_ ENSG00000013375|ENST00000513973|PGM3;nc|ENSG00000013375|O95394-3|PGM3;nc|ENSG00000013375|O95394-4|PGM3 34.10243960390752 0.1078313939113124 4 {[DA]|[EG]}D{[HG]|PP}{M(Oxidation (M))|F}H 7 2 36.501 0.0 0.0 3.5664 0.0 0.0 0.0 241.15461943431856 241.15461943431856 16.122279031934994 0.0 0.0 0.0 0 1.1307196863200843 2.0 0.0 0.0 + {[DA]|[EG]}D{[HG]|PP}{M(Oxidation (M))|F}H 3.5664 + + 120 1 1.303 35856.4 1.0 7869 4774 12634 HBL1_DMSO_200M_050219_2,12645 HBL1_DMSO_200M_050219_2,12645,DADGHFHLI True True DADGHFHLI 67.56894 512.7474 20284270.0 12634.0 ENSG00000013375|ENST00000513973|PGM3;;nc|ENSG00000013375|O95394-3|PGM3;;nc|ENSG00000013375|O95394-4|PGM3 4.323336044947307 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12646 67.57 25.0 1493000.0 25 0 259670.0 + 16022 ITGPAHWEV 9 79 505.25873110154646 1008.5029092698928 2 505.2589599490166 MULTI CID FTMS 0 0 0 12634 959470.375 0.669520707459961 -2 0.2007064819335937 12 Unmodified _ITGPAHWEV_ ENSG00000158793|ENST00000368009|NIT1;ENST00000485594.1_1_1:161089027-161090552:+|nuORF;nc|ENSG00000158793|Q86X76-2|NIT1;nc|ENSG00000158793|Q86X76-3|NIT1;nc|ENSG00000158793|Q86X76-4|NIT1 20.453626601364224 0.2830276176381075 4 {I|L}T[{M(Oxidation (M))|F}V]WAC(Carbamidomethyl (C)){I|L} 8 7 + 53.619 0.0 0.0 5.3167 5.3167 79.434 0.0 0.0 0.0 24.477437731477423 6.447340481202062 6.447340481202062 6.447340481202062 0 0.5994850021680094 2.0 0.0 0.0 {I|L}T[{M(Oxidation (M))|F}V]WAC(Carbamidomethyl (C)){I|L};{I|L}T[{M(Oxidation (M))|F}V]W[MN]V;{I|L}T[{M(Oxidation (M))|F}V][YN]GPV;{I|L}T[WY]{[CA]|SS}GPV;{I|L}[{M(Oxidation (M))|F}V]WTAC(Carbamidomethyl (C)){I|L};{I|L}[{M(Oxidation (M))|F}V]W[MN]S{I|L};{I|L}[{M(Oxidation (M))|F}V]TWAC(Carbamidomethyl (C)){I|L};{I|L}[{M(Oxidation (M))|F}V]W[MN]TV;{I|L}[{M(Oxidation (M))|F}V]WT[MN]V;{I|L}[{M(Oxidation (M))|F}V]T[YN]GPV 5.3167;4.6774;4.1707;3.8722;3.2026;3.0338;2.7815;2.6114;2.5633;2.4341 -;-;-;-;-;-;-;-;-;- 370 + 1 1.303 36096.5 1.0 7870 4774 12634 HBL1_DMSO_200M_050219_2,12646 HBL1_DMSO_200M_050219_2,12646,ITGPAHWEV False True ITGPAHWEV 67.570117 505.258959949017 11003870.0 12634.0 ENSG00000158793|ENST00000368009|NIT1;;nc|ENSG00000158793|Q86X76-3|NIT1;;nc|ENSG00000158793|Q86X76-2|NIT1;;ENST00000485594.1_1_1:161089027-161090552:+|nuORF;;nc|ENSG00000158793|Q86X76-4|NIT1 2.320192575454712 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12647 67.573 123.0 676480.0 25 0 81229.0 + -1 YKSMCEECCF 10 62 715.2483391127342 1428.4821252922684 2 715.2490112185478 MULTI CID FTMS 0 0 0 12634 687452.3125 0.7496427704411436 -1 0.1126327514648437 13 3 Carbamidomethyl (C),Oxidation (M) _YKSM(Oxidation (M))C(Carbamidomethyl (C))EEC(Carbamidomethyl (C))C(Carbamidomethyl (C))F_ REV__ENSG00000146463|ENST00000314607|ZMYM4;REV__nc|ENSG00000146463|Q5VZL5-2|ZMYM4;REV__nc|ENSG00000146463|Q5VZL5-3|ZMYM4;REV__nc|ENSG00000146463|Q5VZL5-4|ZMYM4 3.5964929083625545 0.7100006075494749 4 YYYDY 5 -1 76.256 0.0 0.0 5.3382 0.0 0.0 0.0 658.1818941705686 658.1818941705686 64.04947189572098 0.0 0.0 0.0 0 0.8494850021680094 2.0 1.1307196863200843 0.0 YYYDY 5.3382 - 59 + 1 1.303 63986.7 1.0 7871 4774 12634 HBL1_DMSO_200M_050219_2,12647 HBL1_DMSO_200M_050219_2,12647,YKSMCEECCF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12648 67.575 81.0 679530.0 25 0 85115.0 + 41876 VPYRVVGL 8 73 451.7766384081477 901.5387238830954 2 451.7764465212822 MULTI CID FTMS 0 0 0 12634 607025.9375 0.7313160204374215 2 -0.2153091430664062 14 Unmodified _VPYRVVGL_ ENSG00000176624|ENST00000406189|MEX3C;ENSG00000181588|ENST00000402693|MEX3D;ENSG00000183496|ENST00000329713|MEX3B;ENSG00000254726|ENST00000532414|MEX3A;ENST00000558133.1_1_15:82335503-82336997:-|nuORF;nc|ENSG00000181588|Q86XN8-2|MEX3D;nc|ENSG00000181588|Q86XN8-3|MEX3D 38.15118350030904 0.2652218139009398 4 VPY 3 5 42.479 0.0 0.0 4.7119 0.0 0.0 0.0 539.3303316705686 539.3303316705686 21.84447197927419 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 + VPY 4.7119 + + 126 + 1 1.303 48403.2 1.0 7872 4774 12634 HBL1_DMSO_200M_050219_2,12648 HBL1_DMSO_200M_050219_2,12648,VPYRVVGL False True VPYRVVGL 67.574501 451.776446521282 7336325.5 12634.0 ENSG00000183496|ENST00000329713|MEX3B;;ENSG00000176624|ENST00000406189|MEX3C;;nc|ENSG00000181588|Q86XN8-3|MEX3D;;nc|ENSG00000181588|Q86XN8-2|MEX3D;;ENST00000558133.1_1_15:82335503-82336997:-|nuORF;;ENSG00000254726|ENST00000532414|MEX3A;;ENSG00000181588|ENST00000402693|MEX3D 5.973876476287842 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12649 67.577 135.0 1024200.0 25 0 46659.0 + 3333 AYMELQQKAEF 11 139 679.3264347582409 1356.6383165832815 2 679.3270751833916 MULTI CID FTMS 0 0 0 12634 568413.6875 0.3365588456439837 -2 0.2007064819335937 15 Unmodified _AYMELQQKAEF_ ENSG00000117724|ENST00000366955|CENPF 78.61045856554632 0.0086900212848084 4 {[QN]|[E{I|L}]|[KN]}GPPQQ{I|L}EAE{M(Oxidation (M))|F} 12 7 + 85.047 0.0 0.0 6.2689 6.2689 79.059 0.0 0.0 0.0 3.0105825296094224 14.88679343829503 3.0105825296094224 3.0105825296094224 0 1.6307196863200843 0.8239087409443188 1.332438536731469 0.8494850021680094 {[QN]|[E{I|L}]|[KN]}GPPQQ{I|L}EAE{M(Oxidation (M))|F};{[VA]|[{I|L}G]}{I|L}EREMYAE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KQ]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}EAE{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KQ]NQMKAE{M(Oxidation (M))|F};[{I|L}A]VEREMYAE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}GPP[AG]Q{I|L}EAE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}GPPQ[AG]{I|L}EAE{M(Oxidation (M))|F};{[VA]|[{I|L}G]}{I|L}ET[PS]MYAE{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AVREMYAE{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[WH]QQ{I|L}EAE{M(Oxidation (M))|F} 6.2689;6.047;5.7383;5.6621;5.6123;5.5983;5.5983;5.5951;5.5682;5.4331 -;-;-;-;-;-;-;-;-;- 13647 1 1.303 107397.6 1.0 7873 4774 12634 HBL1_DMSO_200M_050219_2,12649 HBL1_DMSO_200M_050219_2,12649,AYMELQQKAEF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12650 67.58 147.0 570220.0 25 0 63618.0 + 43608 YAFNMKATV 9 141 530.7598438353665 1059.505134737533 2 530.7601806521416 MULTI CID FTMS 0 0 0 12634 566643.625 0.3006830647306311 -2 0.2007064819335937 16 Oxidation (M) _YAFNM(Oxidation (M))KATV_ ENSG00000109971|ENST00000534624|HSPA8 45.69961567697781 0.0497987121815769 4 YA{M(Oxidation (M))|F}N{M(Oxidation (M))|F}AKTV 9 2 + 81.798 0.0 0.0 7.7204 7.7204 84.327 0.0 0.0 0.0 33.76918465971855 3.521825181113627 3.521825181113627 3.521825181113627 0 0.4247425010840047 2.0 0.9749073637206092 0.0 YA{M(Oxidation (M))|F}N{M(Oxidation (M))|F}AKTV;YA{M(Oxidation (M))|F}N{M(Oxidation (M))|F}AKS{I|L};YA{M(Oxidation (M))|F}A{M(Oxidation (M))|F}NA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};YA{M(Oxidation (M))|F}GG{M(Oxidation (M))|F}AKTV;YA{M(Oxidation (M))|F}N{M(Oxidation (M))|F}ATKV;YA{M(Oxidation (M))|F}AAK{[CA]|SS}C{I|L};YA{M(Oxidation (M))|F}AAK{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};YA{M(Oxidation (M))|F}GG{M(Oxidation (M))|F}AKS{I|L};YA{M(Oxidation (M))|F}A{M(Oxidation (M))|F}GGA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};YA{M(Oxidation (M))|F}VM{[ET]|[MV]}TV 7.7204;7.388;7.2456;6.8513;6.746;6.6785;6.6291;6.5189;6.3765;5.9024 -;-;-;-;-;-;-;-;-;- 2317 + 1 1.303 71610.6 1.0 7874 4774 12634 HBL1_DMSO_200M_050219_2,12650 HBL1_DMSO_200M_050219_2,12650,YAFNMKATV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12651 67.589 483.0 480860.0 25 0 253200.0 -1 0 83 975.4158035925508 1948.8170542519017 2 975.4164306521416 MULTI CID FTMS 0 0 0 12634 437719.96875 0.4270278584065293 2 -0.2153091430664062 17 4 [YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]} 14 -1 + 65.344 0.0 0.0 3.353 3.353 71.117 0.0 0.0 0.0 8.895840698003 5.255762612236907 5.255762612236907 5.255762612236907 0 0.0 1.2218487496163564 0.7742275032520141 1.274227503252014 [YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]};[YQ]{I|L}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}[RH][HQ];{[RE]|[WV]}[YQ]{I|L}ENYC(Carbamidomethyl (C))C(Carbamidomethyl (C))E{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]};{[SA]|[TG]}V{M(Oxidation (M))|F}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}HH{[{M(Oxidation (M))|F}H]|[RQ]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}[RH][HK];{[SA]|[TG]}V{M(Oxidation (M))|F}EC(Carbamidomethyl (C))C(Carbamidomethyl (C))YNE{I|L}[RH][HQ] 3.353;3.0833;2.8966;2.1978;2.0528;1.9281;1.7831 -;-;-;-;-;-;- 559 1 1.303 156015.2 1.0 7875 4774 12634 HBL1_DMSO_200M_050219_2,12651 HBL1_DMSO_200M_050219_2,12651, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12652 67.591 86.0 675130.0 25 0 57741.0 + 22361 LPSPLKQTI 9 100 498.8081792005347 995.6018054678694 2 498.8073608279228 MULTI CID FTMS 0 0 0 12634 427524.8125 0.0016136157673396 47 -3.873367309570313 18 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 32.78568957990786 0.1150597335874693 4 [{I|L}P]SQKEA 7 5 52.202 0.0 0.0 5.2433 0.0 0.0 0.0 239.17673157554444 239.17673157554444 38.02124182077982 0.0 0.0 0.0 0 1.0 1.6989700043360187 1.055462187404089 0.0 [{I|L}P]SQKEA 5.2433 - 617 1 1.303 51473.7 1.0 7876 4774 12634 HBL1_DMSO_200M_050219_2,12652 HBL1_DMSO_200M_050219_2,12652,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12653 67.593 136.0 584840.0 25 0 85950.0 7475 EGSDIYDLL 9 92 342.16670652489927 1023.478290174898 3 342.1660949587822 MULTI CID FTMS 0 0 0 12634 386020.34375 0.4699988227819618 -2 0.2007064819335937 19 Unmodified _EGSDIYDLL_ ENSG00000143951|ENST00000272321|WDPCP;ENST00000409835.5_1_2:63587012-63815411:-|nuORF;ENST00000493315.1_1_2:63631156-63711794:-|nuORF;nc|ENSG00000143951|O95876-2|WDPCP;nc|ENSG00000143951|O95876-3|WDPCP 23.1484247019978 0.2366544122328345 4 {[DA]|[EG]}D 3 6 34.265 0.0 0.0 3.3479 0.0 0.0 0.0 719.3628494932098 719.3628494932098 19.726890629795548 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[DA]|[EG]}D 3.3479 - 138 + 1 1.303 69162.0 1.0 7877 4774 12634 HBL1_DMSO_200M_050219_2,12653 HBL1_DMSO_200M_050219_2,12653,EGSDIYDLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12654 67.598 248.0 528040.0 25 0 78140.0 + 15173 IPDGGVHII 9 143 460.76373907398806 919.512925214776 2 460.7644225955009 MULTI CID FTMS 0 0 0 12634 356061.53125 0.264035785682631 4 -0.3637161254882812 20 Unmodified _IPDGGVHII_ ENSG00000183808|ENST00000520560|RBM12B 36.04419817259434 0.0971720506436186 4 {I|L}PD{[NV]|[RG]}H{I|L}{I|L} 8 2 + 61.094 0.0 0.0 6.6442 6.6442 87.018 0.0 0.0 0.0 26.40172970858726 10.683351842078835 10.683351842078835 9.124379954164588 0 1.2134679910804405 1.6989700043360187 0.4247425010840047 0.4247425010840047 {I|L}PD{[NV]|[RG]}H{I|L}{I|L};{I|L}S[RV][{M(Oxidation (M))|F}V]S{I|L};{I|L}S[RV][{M(Oxidation (M))|F}V]TV;{I|L}SAA[W{M(Oxidation (M))|F}]{I|L}{I|L};[HV]NDP{I|L}{I|L}{I|L};{I|L}P{[{M(Oxidation (M))|F}C]|[YS]}K{I|L}S{I|L};{I|L}P{[{M(Oxidation (M))|F}C]|[YS]}KS{I|L}{I|L};{I|L}S[RV][MT]T{I|L};{I|L}P{[{M(Oxidation (M))|F}C]|[YS]}K{I|L}TV;[HV]{I|L}DNP{I|L}{I|L} 6.6442;5.6519;5.4823;5.2469;4.7235;4.571;4.4934;4.4796;4.4015;4.3003 -;-;-;-;-;-;-;-;-;- 1250 + 1 1.303 107209.7 1.0 7878 4774 12634 HBL1_DMSO_200M_050219_2,12654 HBL1_DMSO_200M_050219_2,12654,IPDGGVHII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12656 67.607 414.0 373120.0 25 0 16088.0 -1 0 122 874.9060810207458 1747.7976091082917 2 875.4056884646416 MULTI CID FTMS 0 0 0 12655 272281.0625 0.2824368014400818 3 -0.3180618286132812 1 4 [NP]SNTAVYMAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 86.352 0.0 0.0 4.9406 4.9406 69.088 0.0 0.0 0.0 12.4408700551394 7.659167939666318 7.659167939666318 0.8610161175976572 0 0.8807196863200843 0.8538719643217619 0.7302046884880937 1.0994850021680094 [NP]SNTAVYMAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]SNEAVY[C(Carbamidomethyl (C))K]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]SNTAYVMAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]SNEAYV[C(Carbamidomethyl (C))K]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]SNTAVYMAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]SNTAVYMAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]SGGTAVYMAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NCAVY[C(Carbamidomethyl (C))K]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NCAYV[C(Carbamidomethyl (C))K]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]SGGEAVY[C(Carbamidomethyl (C))K]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.9406;4.8914;4.753;4.7053;4.4249;4.4249;4.4249;4.3915;4.3915;4.3747 -;-;-;-;-;-;-;-;-;- 11481 1 1.303 106056.1 1.0 7879 4775 12655 HBL1_DMSO_200M_050219_2,12656 HBL1_DMSO_200M_050219_2,12656, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12657 67.609 60.0 665150.0 25 0 55875.0 22399 LPSVNHSEL 9 63 498.2596946225954 994.5048363119907 2 498.2598144412041 MULTI CID FTMS 0 0 0 12655 526426.5 1.0 0 0.0 2 Unmodified _LPSVNHSEL_ ENSG00000221843|ENST00000447166|C2orf16 11.640296217721598 0.521594087909532 4 [PS]{I|L} 3 6 24.437 0.0 0.0 2.4572 0.0 0.0 0.0 694.3125810231815 694.3125810231815 3.4948500216800937 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [PS]{I|L} 2.4572 - 48 1 1.303 35019.5 1.0 7880 4775 12655 HBL1_DMSO_200M_050219_2,12657 HBL1_DMSO_200M_050219_2,12657,LPSVNHSEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12658 67.611 85.0 748910.0 25 0 87939.0 + + 40573 KVIEVFIRA 9 87 537.8371077231408 1073.6596625130817 2 537.8372070193291 MULTI CID FTMS 0 0 0 12655 413200.8125 1.0 0 0.0 3 Unmodified _VKLLWIFGV_ ENSG00000103479|ENST00000262133|RBL2;nc|ENSG00000103479|Q08999-2|RBL2 24.67388899826682 0.2172451872415813 4 KV{I|L}EV 5 -1 49.706 0.0 0.0 4.6296 0.0 0.0 0.0 502.27878748111567 502.27878748111567 36.60728139283883 0.0 0.0 0.0 0 1.325257498915995 0.0 0.0 0.0 KV{I|L}EV 4.6296 - 156 + 1 1.303 57695.0 1.0 7881 4775 12655 HBL1_DMSO_200M_050219_2,12658 HBL1_DMSO_200M_050219_2,12658,VKLLWIFGV False False KVIEVFIRA 67.610863 537.837207019329 3163144.5 12655.0 ENSG00000103479|ENST00000262133|RBL2;;nc|ENSG00000103479|Q08999-2|RBL2 4.463385184605916 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12659 67.613 101.0 868380.0 25 0 59636.0 + 32454 SAFHDFASV 9 113 490.727513601997 979.440474270794 2 490.7272827029228 MULTI CID FTMS 0 0 0 12655 388695.28125 0.138733975977708 -1 0.045654296875 4 Unmodified _SAFHDFASV_ REV__ENSG00000081870|ENST00000194214|IFT25;REV__ENST00000489675.1_1_1:54387326-54394129:-|nuORF 48.345845343767074 0.0439967357579942 4 {[{M(Oxidation (M))|F}H]|[RQ]}D{M(Oxidation (M))|F}ASA[VS] 9 -1 + 39.135 0.0 0.0 3.9956 3.9956 68.602 0.0 0.0 0.0 4.137342758552698 12.026844094963288 4.137342758552698 2.525749891599532 0 0.4247425010840047 0.0 0.805462187404089 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}D{M(Oxidation (M))|F}ASA[VS];{[{M(Oxidation (M))|F}H]|[RQ]}DAS{M(Oxidation (M))|F}A[VS];{[{M(Oxidation (M))|F}H]|[RQ]}DA{M(Oxidation (M))|F}SA[VS];{[SA]|[TG]}{[ET]|[MV]}{[SA]|[TG]}ASA[VS];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}S{[YC]|[HE]}SV;[VP][C(Carbamidomethyl (C))N]S{M(Oxidation (M))|F}A[VS];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{M(Oxidation (M))|F}{[YC]|[HE]}SV;[VP][C(Carbamidomethyl (C))N]{M(Oxidation (M))|F}SA[VS];{[SA]|[TG]}C[RD]V[SG]SV;{[SA]|[TG]}C[QT]{[RE]|[WV]}SV 3.9956;3.7378;3.6883;3.2701;3.0412;3.0254;2.9917;2.9759;2.8586;2.7381 -;-;-;-;-;-;-;-;-;- 457 1 1.303 69339.3 1.0 7882 4775 12655 HBL1_DMSO_200M_050219_2,12659 HBL1_DMSO_200M_050219_2,12659,SAFHDFASV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12660 67.622 514.0 616040.0 25 0 93954.0 + -1 YYCFVDLCCN 10 171 707.2652763623228 1412.5159997914454 2 707.2656127810478 MULTI CID FTMS 0 0 0 12655 348971.28125 0.7895571484063958 2 -0.2049789428710937 5 3 Carbamidomethyl (C) _YYC(Carbamidomethyl (C))FVDLC(Carbamidomethyl (C))C(Carbamidomethyl (C))N_ REV__ENSG00000135898|ENST00000650999|GPR55 19.256988751693697 0.5244284437930726 4 YYYD[DG]EYYY 10 -1 + 80.367 0.0 0.0 5.6896 5.6896 73.328 0.0 0.0 0.0 36.53212513775344 1.411118489617337 1.411118489617337 1.411118489617337 0 1.385151878060192 2.0 1.110924374808178 0.0 YYYD[DG]EYYY;YYYD[DC]PVND{M(Oxidation (M))|F};YYYDY[WD]YY;YYYDY[HN]ND{M(Oxidation (M))|F};YYYDY{[DA]|[EG]}M{M(Oxidation (M))|F}Y;YYYD[DC][YV]{M(Oxidation (M))|F}Y;YYM{M(Oxidation (M))|F}[DG]EYYY;YYM{M(Oxidation (M))|F}[DC]PVND{M(Oxidation (M))|F};YYM{M(Oxidation (M))|F}Y[WD]YY;YYM{M(Oxidation (M))|F}Y[HN]ND{M(Oxidation (M))|F} 5.6896;5.5897;5.5491;5.503;5.2846;4.9817;4.9252;4.8253;4.7847;4.7386 -;-;-;-;-;-;-;-;-;- 4068 + 1 1.303 221235.6 1.0 7883 4775 12655 HBL1_DMSO_200M_050219_2,12660 HBL1_DMSO_200M_050219_2,12660,YYCFVDLCCN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12661 67.624 78.0 491430.0 25 0 47925.0 + 13962 HYQLGLAY 8 78 482.7479939869252 963.4814350406504 2 482.7476684451103 MULTI CID FTMS 0 0 0 12655 335800.3125 1.0 0 0.0 6 Unmodified _HYQLGLAY_ ENSG00000132780|ENST00000350030|NASP;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;ENST00000529239.1_1_8:61850552-61850903:-|nuORF;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP;nc|ENSG00000132780|P49321-4|NASP 32.116972079565 0.368454113111938 4 {[WN]|[YH]}Q{I|L}G{I|L}AY 8 0 + 44.346 0.0 0.0 4.6027 4.6027 80.585 0.0 0.0 0.0 10.272657074340898 28.861235376907928 10.272657074340898 9.262137858390808 0 0.8182503180159344 1.154901959985743 0.0 0.0 + + {[WN]|[YH]}Q{I|L}G{I|L}AY;{[WN]|[YH]}[AG]{I|L}G{I|L}AY 4.6027;3.6413 +;- + 62 1 1.303 35894.0 1.0 7884 4775 12655 HBL1_DMSO_200M_050219_2,12661 HBL1_DMSO_200M_050219_2,12661,HYQLGLAY False True HYQLGLAY 67.623882 482.74766844511 1883808.75 12655.0 nc|ENSG00000132780|P49321-2|NASP;;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;;ENSG00000132780|ENST00000350030|NASP;;nc|ENSG00000132780|P49321-4|NASP;;nc|ENSG00000132780|P49321-3|NASP;;ENST00000529239.1_1_8:61850552-61850903:-|nuORF 7.344427903493245 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12662 67.628 237.0 639740.0 25 0 53780.0 + 10052 FPQLRPSV 8 183 472.27082609220855 942.5270992512172 2 472.2697631716728 MULTI CID FTMS 0 0 0 12655 309961.71875 0.9155149475350683 1 -0.1696548461914062 7 Unmodified _FPQLRPSV_ REV__ENSG00000168792|ENST00000307201|ABHD15 19.438996006549623 0.6237395211498085 4 Y 1 -1 13.979 0.0 0.0 1.4832 0.0 0.0 761.4523597266062 0.0 761.4523597266062 0.0 -0.2904561281720035 -0.2904561281720035 0.0 0 0.0 0.0 0.0 0.0 Y 1.4832 - 585 + 1 1.303 117424.6 1.0 7885 4775 12655 HBL1_DMSO_200M_050219_2,12662 HBL1_DMSO_200M_050219_2,12662,FPQLRPSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12663 67.639 592.0 233160.0 25 0 14068.0 + -1 SYFMYCVSL 9 172 593.2493708402807 1184.4841887473613 2 593.2493774294853 MULTI CID FTMS 0 0 0 12655 235690.734375 0.956601857420843 1 -0.1696548461914062 8 Carbamidomethyl (C),Oxidation (M) _SYFM(Oxidation (M))YC(Carbamidomethyl (C))VSL_ REV__ENST00000574382.1_1_17:9460501-9460639:-|nuORF 28.486842064014134 0.1687311288560894 4 {M(Oxidation (M))|F}TEGNVS{I|L} 8 -1 48.731 0.0 0.0 4.1142 0.0 0.0 319.06721694160314 0.0 319.06721694160314 0.0 33.246914685257764 0.0 0.0 0 0.5 0.0 0.7134679910804405 0.3054621874040891 {M(Oxidation (M))|F}TEGNVS{I|L} 4.1142 - 1642 1 1.303 105792.1 1.0 7886 4775 12655 HBL1_DMSO_200M_050219_2,12663 HBL1_DMSO_200M_050219_2,12663,SYFMYCVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12664 67.651 739.0 340390.0 25 0 22387.0 + -1 VVTSKCSD 8 231 448.2140022207594 0 448.2143737673759 PEAK CID FTMS 0 0 0 12655 226892.3125 1.0 0 0.0 9 Carbamidomethyl (C) _VVTSKC(Carbamidomethyl (C))SD_ REV__ENSG00000135476|ENST00000257934|ESPL1;REV__nc|ENSG00000135476|Q14674-2|ESPL1 9.347437153973935 0.5488964601725408 4 C(Carbamidomethyl (C)){I|L} 2 -1 9.3146 0.0 0.0 1.0414 0.0 0.0 99.06793669185784 519.2022799127561 618.270216604614 0.0 0.0 0.0 0.0 0 0.0731074559755159 0.0 0.0 0.0 C(Carbamidomethyl (C)){I|L} 1.0414 - 38 + 1 1.303 190305.9 1.0 7887 4775 12655 HBL1_DMSO_200M_050219_2,12664 HBL1_DMSO_200M_050219_2,12664,VVTSKCSD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12665 67.663 635.0 272870.0 25 0 26262.0 + 45882 YYRDYPTLV 9 160 595.2984344322119 1188.5823159312238 2 595.2983276247978 MULTI CID FTMS 0 0 0 12655 202289.078125 0.5656821777422945 -1 0.045654296875 10 Unmodified _YYRDYPTLV_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87355723-87398314:+|nuORF 51.41523569358685 0.0372669606867193 4 [TP]{[{M(Oxidation (M))|F}H]|[RQ]}DYPT{I|L}V 10 3 + 66.014 0.0 0.0 5.554 5.554 76.281 0.0 0.0 0.0 6.598326854749431 14.146518864155126 6.598326854749431 3.155279824084033 0 1.16944517631652 1.2218487496163564 0.9247425010840048 0.0 [TP]{[{M(Oxidation (M))|F}H]|[RQ]}DYPT{I|L}V;[TP]{[{M(Oxidation (M))|F}H]|[RQ]}DPYT{I|L}V;[TP]{[{M(Oxidation (M))|F}H]|[RQ]}DPTY{I|L}V;[{I|L}T][HM]DYPT{I|L}V;[TP]{[{M(Oxidation (M))|F}H]|[RQ]}D{I|L}{M(Oxidation (M))|F}T{I|L}V;[{I|L}T][HM]DPYT{I|L}V;[{I|L}T][HM]DPTY{I|L}V;[{I|L}T][HM]D{I|L}{M(Oxidation (M))|F}T{I|L}V;[NP]S[PS]DYPT{I|L}V;[TP]{[{M(Oxidation (M))|F}H]|[RQ]}D{I|L}T{M(Oxidation (M))|F}{I|L}V 5.554;5.2885;5.1023;4.9988;4.8045;4.7334;4.5472;4.2494;4.0672;4.0447 -;-;-;-;-;-;-;-;-;- 3563 1 1.303 129395.2 1.0 7888 4775 12655 HBL1_DMSO_200M_050219_2,12665 HBL1_DMSO_200M_050219_2,12665,YYRDYPTLV True True YYRDYPTLV 67.662565 595.2986 4136828.0 12655.0 ENST00000454465.1_1_2:87355723-87398314:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 6.897283871968587 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12666 67.674 672.0 156790.0 25 0 6526.2 + 31492 RQADLKNWSL 10 144 615.8323621276709 1229.6501713221417 2 615.8334228396416 MULTI CID FTMS 0 0 0 12655 162318.671875 1.0 0 0.0 11 Unmodified _RQADLKNWSL_ ENSG00000198815|ENST00000361346|FOXJ3;nc|ENSG00000198815|Q9UPW0-2|FOXJ3 30.7034409873982 0.2788461460996952 4 {[WN]|[YH]}{[VA]|[{I|L}G]}{I|L}KNW{[TV]|[{I|L}S]} 10 3 + 49.186 0.0 0.0 4.0 4.0 71.369 0.0 0.0 0.0 5.981362441963327 29.73940113832009 5.981362441963327 3.995682138910368 0 0.5796896906561032 1.6989700043360187 0.0 0.8494850021680094 {[WN]|[YH]}{[VA]|[{I|L}G]}{I|L}KNW{[TV]|[{I|L}S]};{[WN]|[YH]}{[VA]|[{I|L}G]}{I|L}KN{[SA]|[TG]}D{I|L};{[WN]|[YH]}{[VA]|[{I|L}G]}{I|L}KGGW{[TV]|[{I|L}S]};{[WN]|[YH]}{[VA]|[{I|L}G]}{I|L}KN{[DA]|[EG]}{[TV]|[{I|L}S]};[VG][WQ]{I|L}KNW{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}WNK{I|L}[HD]S{I|L};{[QN]|[E{I|L}]|[KN]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}KNW{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}V]{[SA]|[TG]}NK{I|L}[HD]S{I|L};[VG][WQ]{I|L}KN{[SA]|[TG]}D{I|L};[{I|L}T][RN]{[QV]|[N{I|L}]|[RA]|[KV]}NW{[TV]|[{I|L}S]} 4;3.6751;3.2547;3.2547;3.0941;2.9213;2.8776;2.8124;2.7692;2.768 -;-;-;-;-;-;-;-;-;- 1092 1 1.303 79753.4 1.0 7889 4775 12655 HBL1_DMSO_200M_050219_2,12666 HBL1_DMSO_200M_050219_2,12666,RQADLKNWSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12667 67.68 233.0 315080.0 25 0 21882.0 + 15139 INTIPAPSAPV 11 120 540.3088983346497 1078.603243736099 2 540.3096191287041 MULTI CID FTMS 0 0 0 12655 155181.15625 0.7993005592757262 1 -0.1696548461914062 12 Unmodified _INTIPAPSAPV_ ENSG00000186628|ENST00000334574|FSD2;nc|ENSG00000186628|A1L4K1-2|FSD2 27.628801355627647 0.4434699450731472 4 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]TQ[YK]V 9 6 + 39.912 0.0 0.0 3.7003 3.7003 74.135 0.0 0.0 0.0 25.932496569181048 1.6630926501522296 1.6630926501522296 7.191512336730035 0 0.3054621874040891 1.6989700043360187 0.8494850021680094 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]TQ[YK]V;{[QV]|[N{I|L}]|[RA]|[KV]}RRM[YK]V;[{I|L}P]PTQT[VP]{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PT[AG]T[VP]{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]PT[NP][{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]} 3.7003;3.0336;2.2085;1.3589;0.79776 -;-;-;-;- 265 + 1 1.303 61844.6 1.0 7890 4775 12655 HBL1_DMSO_200M_050219_2,12667 HBL1_DMSO_200M_050219_2,12667,INTIPAPSAPV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12668 67.693 717.0 172540.0 25 0 12768.0 + 5302 DLDFAVSRRSG 11 156 611.8139643247578 1221.6133757163154 2 611.8140136599541 MULTI CID FTMS 0 0 0 12655 153375.609375 0.8862121964198109 1 -0.1696548461914062 13 Unmodified _DLDFAVSRRSG_ REV__ENSG00000196739|ENST00000356083|COL27A1;REV__nc|ENSG00000196739|Q8IZC6-3|COL27A1 17.11289562659939 0.6791789249425932 4 [{I|L}T]{M(Oxidation (M))|F}EAV{I|L}Q 8 -1 35.619 0.0 0.0 2.9157 0.0 0.0 0.0 317.13574544904617 317.13574544904617 23.274757996570496 0.0 0.0 0.0 0 0.0 0.6020599913279624 1.5264209843288905 0.0 [{I|L}T]{M(Oxidation (M))|F}EAV{I|L}Q 2.9157 - 4228 1 1.303 92363.9 1.0 7891 4775 12655 HBL1_DMSO_200M_050219_2,12668 HBL1_DMSO_200M_050219_2,12668,DLDFAVSRRSG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12669 67.705 738.0 217870.0 25 0 18502.0 + + -1 HVYDLFEKA 9 197 561.269871795568 1120.5251906579358 2 561.2847778201103 MULTI CID FTMS 0 0 0 -1 0 14 Carbamidomethyl (C) _VHSEYIIC(Carbamidomethyl (C))T_ nc|ENSG00000075856|Q15020-4|SART3;ENSG00000075856|ENST00000546815|SART3;nc|ENSG00000075856|Q15020-2|SART3 18.13498045792455 0.3457906370836843 4 {[QG]|[NA]}M{I|L}[TP]T{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 10 -1 + 41.047 0.0 0.0 3.6632 3.6632 67.976 0.0 0.0 0.0 2.819810915545659 7.269987279362624 2.819810915545659 2.819810915545659 0 0.0 0.721246399047171 0.7134679910804405 0.3054621874040891 {[QG]|[NA]}M{I|L}[TP]T{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HV]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}T{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[QG]|[NA]}M[TP]{I|L}T{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[QG]|[NA]}M{I|L}[TP]TR{[MS]|[{M(Oxidation (M))|F}A]};[HV]{I|L}{I|L}DTY{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HV]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}TR{[MS]|[{M(Oxidation (M))|F}A]};{[QG]|[NA]}M{I|L}M[KS]E[TP];{[QG]|[NA]}M{I|L}[W{I|L}]{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HV]{[ET]|[MV]}[{I|L}V]Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[QG]|[NA]}M{I|L}M[{I|L}T]E[QA] 3.6632;3.4115;3.1259;2.8583;2.8329;2.6067;2.4651;2.4435;2.4093;2.3378 -;-;-;-;-;-;-;-;-;- 2396 1 1.303 124788.3 1.0 7892 4775 12655 HBL1_DMSO_200M_050219_2,12669 HBL1_DMSO_200M_050219_2,12669,VHSEYIICT False False HVYDLFEKA 67.705371 561.28477782011 812304.75 12655.0 nc|ENSG00000075856|Q15020-4|SART3;;ENSG00000075856|ENST00000546815|SART3;;nc|ENSG00000075856|Q15020-2|SART3 0.3183353592952092 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12670 67.72 800.0 133730.0 25 0 19644.0 + -1 RQADLKNWSL 10 154 411.1962523730957 410.1889759064957 1 410.8909179568291 MULTI CID FTMS 0 0 0 12655 16738.15234375 0.0448000978102923 25 -1.7339324951171875 15 nc|ENSG00000198815|Q9UPW0-2|FOXJ3;ENSG00000198815|ENST00000361346|FOXJ3 4 S{I|L} 2 -1 15.688 0.0 0.0 3.8245 0.0 0.0 192.06118157231447 0.0 192.06118157231447 0.0 6.083493856482249 0.0 0.0 0 0.0 0.0 0.25 0.0 S{I|L} 3.8245 - 19 + 1 1.303 86738.2 0.8199999928474426 7893 4775 12655 HBL1_DMSO_200M_050219_2,12670 HBL1_DMSO_200M_050219_2,12670, False False RQADLKNWSL 67.72036 410.890917956829 1250926.8125 12655.0 nc|ENSG00000198815|Q9UPW0-2|FOXJ3;;ENSG00000198815|ENST00000361346|FOXJ3 5.868753115336101 3.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12671 67.731 620.0 114040.0 25 0 9896.6 -1 EFCFCLESGSC 11 126 641.2333862185478 0 641.2333862185478 PEAK CID FTMS 0 0 0 -1 0 16 Carbamidomethyl (C) _EFCFCLESGSC(Carbamidomethyl (C))_ ENST00000299598.11_1_16:81199358-81222588:-|nuORF;ENST00000533478.5_1_16:81174978-81214887:-|nuORF;nc|ENSG00000166473|Q7Z442-2|PKD1L2;nc|ENSG00000166473|Q7Z442-3|PKD1L2;nc|ENSG00000166473|Q7Z442-4|PKD1L2;nc|ENSG00000166473|Q7Z442|PKD1L2 5.296884461304476 0.47618401536486 4 QS{I|L}PD 5 -1 14.486 0.0 0.0 1.1313 0.0 0.0 640.1149785948837 97.04145227603748 737.1564308709212 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 QS{I|L}PD 1.1313 - 167 + 1 1.303 57908.5 1.0 7894 4775 12655 HBL1_DMSO_200M_050219_2,12671 HBL1_DMSO_200M_050219_2,12671,EFCFCLESGSC False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 12672 67.745 800.0 239540.0 25 0 16282.0 + -1 AAPLLAAV 8 252 384.23574894491776 766.4569449566355 2 384.2354919314384 MULTI CID FTMS 0 0 0 12655 118352.59375 0.014428550342224 15 -0.724761962890625 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAPLLAAV_ REV__ENST00000310597.5_1_11:64884935-64885049:-|nuORF;REV__ENST00000352681.7_2_16:727083-728243:+|nuORF 0.7936320650641473 0.8195151834710337 4 {I|L} 1 -1 10.596 0.0 0.0 1.3825 0.0 0.0 635.3617128783137 0.0 635.3617128783137 0.0 1.9200211536437275 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3825 + + 44 + 1 1.303 149474.9 0.8500000238418579 7895 4775 12655 HBL1_DMSO_200M_050219_2,12672 HBL1_DMSO_200M_050219_2,12672,AAPLLAAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12673 67.758 653.0 171520.0 25 0 9846.2 -1 0 128 653.3286866698638 1956.9642306097912 3 653.6700317263603 MULTI CID FTMS 0 0 0 -1 0 18 4 [{I|L}T][HS]{I|L} 5 -1 23.226 0.0 0.0 1.1868 0.0 0.0 0.0 1402.6337010750678 1402.6337010750678 6.949980515458979 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.1747425010840047 0.0 [{I|L}T][HS]{I|L} 1.1868 - 1126 1 1.303 89337.0 1.0 7896 4775 12655 HBL1_DMSO_200M_050219_2,12673 HBL1_DMSO_200M_050219_2,12673, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12674 67.768 585.0 225920.0 25 0 10281.0 + 34749 SQADVDAFRQL 11 168 625.3123786239154 1248.610204314631 2 625.3124267458916 MULTI CID FTMS 0 0 0 12655 93966.046875 0.978572645487949 1 -0.1696548461914062 19 Unmodified _SQADVDAFRQL_ ENSG00000110619|ENST00000380525|CARS1 36.39500950444726 0.267929034476522 4 {[QS]|[NT]}ADVDA{M(Oxidation (M))|F} 8 3 49.337 0.0 0.0 3.9513 0.0 0.0 0.0 412.2321566217407 412.2321566217407 36.23794212359069 0.0 0.0 0.0 0 1.086696871556164 0.4559319556497244 0.0 0.0 + {[QS]|[NT]}ADVDA{M(Oxidation (M))|F} 3.9513 + + 668 + 1 1.303 102121.7 1.0 7897 4775 12655 HBL1_DMSO_200M_050219_2,12674 HBL1_DMSO_200M_050219_2,12674,SQADVDAFRQL False True SQADVDAFRQL 67.767818 625.312426745892 2382614.5 12655.0 ENSG00000110619|ENST00000380525|CARS1 5.749488671620687 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12676 67.772 1.1 41884000.0 25 0 7488500.0 + 43603 YAFNMKATV 9 66 522.7624437942544 1043.5103346553087 2 522.7634155154228 MULTI CID FTMS 0 0 0 12675 59797620.0 1.0 0 0.0 1 Unmodified _YAFNMKATV_ ENSG00000109971|ENST00000534624|HSPA8 31.26834338654808 0.1333407332142048 4 YA{M(Oxidation (M))|F}NM[KA]TV 9 0 + 70.838 0.0 0.0 6.7884 6.7884 88.703 0.0 0.0 0.0 40.38750309660614 11.641974908773918 11.641974908773918 9.208187539523747 0 0.4247425010840047 2.0 0.6747425010840047 0.0 + + YA{M(Oxidation (M))|F}NM[KA]TV;YA{M(Oxidation (M))|F}GGM[KA]TV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[WQ][HV]{[ES]|[DT]|[{I|L}C]} 6.7884;5.906;0.037504 +;-;- + 165 + 1 1.278 42343.2 1.0 7898 4776 12675 HBL1_DMSO_200M_050219_2,12676 HBL1_DMSO_200M_050219_2,12676,YAFNMKATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12677 67.773 3.9 13692000.0 25 0 2072900.0 21781 LPNAVLLF 8 63 443.773538906193 885.532524879186 2 443.7736694216728 MULTI CID FTMS 0 0 0 12675 17136010.0 1.0 0 0.0 2 Unmodified _LPNAVLLF_ ENSG00000139197|ENST00000675855|PEX5;nc|ENSG00000139197|P50542-2|PEX5;nc|ENSG00000139197|P50542-3|PEX5;nc|ENSG00000139197|P50542-4|PEX5 24.67388899826682 0.525179942228231 4 {I|L}P 2 6 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3739335184971 672.3739335184971 18.3888594289104 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 80 + 1 1.278 48652.5 1.0 7899 4776 12675 HBL1_DMSO_200M_050219_2,12677 HBL1_DMSO_200M_050219_2,12677,LPNAVLLF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12678 67.774 2.2 17265000.0 25 0 2458800.0 + 37124 TGYLNTVTV 9 54 484.2583831501523 966.5022133671048 2 484.2588073611259 MULTI CID FTMS 0 0 0 12675 36250612.0 0.1031416935925011 -6 0.6027069091796875 3 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 37.97399986684836 0.0865783450051559 4 T{[QV]|[N{I|L}]|[RA]|[KV]}CTV 6 4 34.754 0.0 0.0 3.5959 0.0 0.0 317.1946094626109 0.0 317.1946094626109 0.0 19.247425010840043 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.4247425010840047 T{[QV]|[N{I|L}]|[RA]|[KV]}CTV 3.5959 - 80 + 1 1.278 37495.9 1.0 7900 4776 12675 HBL1_DMSO_200M_050219_2,12678 HBL1_DMSO_200M_050219_2,12678,TGYLNTVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12679 67.775 4.1 14559000.0 25 0 3044700.0 + 37882 TLVYHVVGV 9 75 493.7869780113941 985.5594030895884 2 493.7873107790947 MULTI CID FTMS 0 0 0 12675 13289869.0 0.7648627124083249 -1 0.1696548461914062 4 Unmodified _TLVYHVVGV_ ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3 44.40701690623563 0.0526327925666318 4 [{I|L}T]VS 4 6 42.479 0.0 0.0 4.3102 0.0 0.0 0.0 582.3057955377561 582.3057955377561 8.120834504790722 0.0 0.0 0.0 0 0.805462187404089 2.0 0.4247425010840047 0.0 [{I|L}T]VS 4.3102 - 210 + 1 1.278 48123.9 1.0 7901 4776 12675 HBL1_DMSO_200M_050219_2,12679 HBL1_DMSO_200M_050219_2,12679,TLVYHVVGV True True TLVYHVVGV 67.775487 493.787310779095 81557776.5 12675.0 nc|ENSG00000189091|Q15393-2|SF3B3;;ENSG00000189091|ENST00000302516|SF3B3 7.476239204406738 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12680 67.777 6.1 6670000.0 25 0 630100.0 + 3508 CREALTMVL 9 71 518.2678127479699 1034.5210725627396 2 518.2689086794853 MULTI CID FTMS 0 0 0 12675 8844454.0 1.0 0 0.0 5 Unmodified _CREALTMVL_ ENSG00000168658|ENST00000477737|VWA3B;ENST00000409460.5_1_2:98703705-98907168:+|nuORF;ENST00000432242.5_1_2:98736050-98809363:+|nuORF;ENST00000463635.1_1_2:98736095-98738506:+|nuORF;nc|ENSG00000168658|Q502W6-2|VWA3B;nc|ENSG00000168658|Q502W6-6|VWA3B;nc|ENSG00000168658|Q502W6-8|VWA3B 22.736283301280096 0.2418982879461534 4 TMV{I|L} 4 5 39.469 0.0 0.0 3.8152 0.0 0.0 572.2728138654312 0.0 572.2728138654312 0.0 23.984484532805155 0.0 0.0 0 0.4247425010840047 0.0 0.805462187404089 0.0 + TMV{I|L} 3.8152 + + 53 1 1.278 36250.7 1.0 7902 4776 12675 HBL1_DMSO_200M_050219_2,12680 HBL1_DMSO_200M_050219_2,12680,CREALTMVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12681 67.778 8.3 7657400.0 25 0 976280.0 + + 21944 LPPHIIRL 8 63 320.2117583217455 957.6134455654365 3 320.2113525271416 MULTI CID FTMS 0 0 0 12675 6710575.5 0.8857669199311616 6 -0.305419921875 6 Unmodified _LPPLHLLR_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 22.736283301280096 0.5659792798204337 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 -1 + 70.438 0.0 0.0 7.3556 7.3556 82.365 0.0 0.0 0.0 59.46903459784544 6.989700043360188 6.989700043360188 3.0102999566398125 0 0.2302046884880938 1.6989700043360187 0.0 0.0 {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 7.3556;7.0412;6.7269;4.398 -;+;-;- + 81 + 1 1.278 57446.7 1.0 7903 4776 12675 HBL1_DMSO_200M_050219_2,12681 HBL1_DMSO_200M_050219_2,12681,LPPLHLLR False False LPPHIIRL 67.777843 320.211352527142 807186832.0 12675.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 3.4887638489405317 3.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12682 67.779 9.2 4648000.0 25 0 795950.0 + 25218 MVADRFSEL 9 56 534.2631464089263 1066.5117398846526 2 534.2634155154228 MULTI CID FTMS 0 0 0 12675 6010260.5 0.9424057462620572 1 -0.0353240966796875 7 Unmodified _MVADRFSEL_ ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 20.41453444215458 0.284085796332423 4 MVAD 4 5 53.175 0.0 0.0 4.9859 0.0 0.0 0.0 647.3172701471311 647.3172701471311 40.07638152291939 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + MVAD 4.9859 + + 20 + 1 1.278 36659.4 1.0 7904 4776 12675 HBL1_DMSO_200M_050219_2,12682 HBL1_DMSO_200M_050219_2,12682,MVADRFSEL False True MVADRFSEL 67.779022 534.263415515423 102994360.0 12675.0 ENSG00000137713|ENST00000527614|PPP2R1B;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 6.387509822845459 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12683 67.78 38.0 1213100.0 25 0 99678.0 + 32487 SALDTITTV 9 86 460.7501975809828 919.4858422287656 2 460.7504150271416 MULTI CID FTMS 0 0 0 12675 3687669.75 1.0 0 0.0 8 Unmodified _SALDTITTV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 34.10243960390752 0.1078313939113124 4 {[SA]|[TG]}{I|L}DT 5 4 31.538 0.0 0.0 3.43 0.0 0.0 0.0 429.2334978286281 429.2334978286281 7.101518203551237 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.6643943297944485 0.0 + {[SA]|[TG]}{I|L}DT 3.43 + + 358 1 1.278 40717.4 1.0 7905 4776 12675 HBL1_DMSO_200M_050219_2,12683 HBL1_DMSO_200M_050219_2,12683,SALDTITTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12684 67.781 18.0 3486600.0 25 0 657110.0 + 39207 TYSEFAREL 9 79 558.2716975375329 1114.5288421418657 2 558.2717773318291 MULTI CID FTMS 0 0 0 12675 3577750.75 0.982976129091506 -1 0.1696548461914062 9 Unmodified _TYSEFAREL_ nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1 33.4449034751529 0.1114409586740657 4 TYSE{M(Oxidation (M))|F}K 6 4 76.459 0.0 0.0 6.8602 0.0 0.0 0.0 356.1624849908813 356.1624849908813 66.85464087144375 0.0 0.0 0.0 0 0.805462187404089 2.0 0.4247425010840047 0.0 TYSE{M(Oxidation (M))|F}K 6.8602 - 120 + 1 1.278 53636.0 1.0 7906 4776 12675 HBL1_DMSO_200M_050219_2,12684 HBL1_DMSO_200M_050219_2,12684,TYSEFAREL True True TYSEFAREL 67.781378 558.271777331829 212204944.0 12675.0 nc|ENSG00000198901|O43663-2|PRC1;;nc|ENSG00000198901|O43663-4|PRC1 7.750697771708171 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12685 67.783 16.0 1982800.0 25 0 175940.0 -1 AVLDLVDQCP 10 71 565.2813317043336 1128.5481104754672 2 565.2817260622978 MULTI CID FTMS 0 0 0 12675 3594976.0 0.904115747204783 1 -0.0353240966796875 10 Carbamidomethyl (C) _AVLDLVDQC(Carbamidomethyl (C))P_ ENSG00000134326|ENST00000256722|CMPK2;nc|ENSG00000134326|Q5EBM0-2|CMPK2;nc|ENSG00000134326|Q5EBM0-3|CMPK2;nc|ENSG00000134326|Q5EBM0-4|CMPK2 29.081581746732265 0.3152867722954398 4 [EP]MENQ 6 -1 35.45 0.0 0.0 3.1412 0.0 0.0 0.0 397.245045860486 397.245045860486 3.003122090841828 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.7742275032520141 [EP]MENQ 3.1412 - 109 1 1.278 34413.0 1.0 7907 4776 12675 HBL1_DMSO_200M_050219_2,12685 HBL1_DMSO_200M_050219_2,12685,AVLDLVDQCP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12686 67.784 12.0 3573000.0 25 0 290800.0 + + 28474 DALRPSVVSI 10 78 528.8056074008193 0 528.8055297732353 PEAK CID FTMS 0 0 0 12675 3156511.25 1.0 0 0.0 11 Unmodified _PTILERQSL_ ENSG00000089154|ENST00000300648|GCN1 25.399314129420983 0.152124705672316 4 SVV 3 -1 23.5 0.0 0.0 2.2262 0.0 0.0 131.08994639479994 636.3131807916624 767.4031271864624 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 SVV 2.2262 - 34 + 1 1.278 43074.2 1.0 7908 4776 12675 HBL1_DMSO_200M_050219_2,12686 HBL1_DMSO_200M_050219_2,12686,PTILERQSL False False DALRPSVVSI 67.783737 528.805529773235 21763124.0 12675.0 ENSG00000089154|ENST00000300648|GCN1 4.80951460202535 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12687 67.785 26.0 2386500.0 25 0 320200.0 14426 IFPDRATLY 9 69 548.2950462992703 1094.5755396653406 2 548.2959472537041 MULTI CID FTMS 0 0 0 12675 2141382.75 1.0 0 0.0 12 Unmodified _IFPDRATLY_ ENSG00000126457|ENST00000454376|PRMT1;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1 19.256988751693697 0.3154191944385105 4 DP{[QN]|[E{I|L}]|[KN]} 4 7 18.94 0.0 0.0 1.7304 0.0 0.0 622.3448353498062 0.0 622.3448353498062 0.0 3.36696871556164 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 DP{[QN]|[E{I|L}]|[KN]} 1.7304 - 66 1 1.278 54743.4 1.0 7909 4776 12675 HBL1_DMSO_200M_050219_2,12687 HBL1_DMSO_200M_050219_2,12687,IFPDRATLY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12688 67.786 19.0 2505900.0 25 0 444850.0 -1 LMEPRACV 8 87 496.2379134987604 990.4612740643208 2 496.7408019900322 MULTI CID FTMS 0 0 0 12675 2140240.25 0.5028095440863373 -6 0.6027069091796875 13 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))EPRAC(Carbamidomethyl (C))V_ ENST00000496281.1_1_20:62323608-62327208:+|nuORF 11.114462752807354 0.7467182956244686 4 [KS]YA[YT]CGV 9 -1 + 34.103 0.0 0.0 3.4431 3.4431 47.041 0.0 0.0 0.0 14.61426266193144 14.97302484056647 14.61426266193144 0.0 0 0.0 0.0 0.0 0.0 [KS]YA[YT]CGV;[KS]AY[YT]CGV;[KS]AY[YT]C(Carbamidomethyl (C))V;[KS]YA[YT]C(Carbamidomethyl (C))V;[KS]YA[YG]{M(Oxidation (M))|F}GV;[KS]AY[YG]{M(Oxidation (M))|F}GV;[KS]Y[YQ]{M(Oxidation (M))|F}GV;[KS]Y[SG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}GV;[SG]V[KP][MN]CGV;[SG]V[KP][MN]C(Carbamidomethyl (C))V 3.4431;3.4431;3.2708;3.2708;2.8353;2.8353;2.1812;1.9235;1.7278;1.55 -;-;-;-;-;-;-;-;-;- 287 + 1 1.278 44761.2 1.0 7910 4776 12675 HBL1_DMSO_200M_050219_2,12688 HBL1_DMSO_200M_050219_2,12688,LMEPRACV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12689 67.787 25.0 1781400.0 25 0 169190.0 + 22951 LSERRLDL 8 92 501.2907679302925 1000.566982927385 2 501.2907592654228 MULTI CID FTMS 0 0 0 12675 1772850.625 0.9711210923102216 6 -0.305419921875 14 Unmodified _LSERRLDL_ REV__ENST00000376055.8_1_20:30310076-30310447:-|nuORF;REV__ENST00000376062.6_1_20:30310076-30310181:-|nuORF;REV__ENST00000420488.5_1_20:30310076-30311747:-|nuORF;REV__ENST00000422920.1_1_20:30310076-30310447:-|nuORF;REV__ENST00000439267.1_1_20:30310076-30311747:-|nuORF;REV__ENST00000450273.1_1_20:30310076-30311603:-|nuORF;REV__ENST00000456404.5_1_20:30310076-30311747:-|nuORF 18.13498045792455 0.6430038125133779 4 DVV[WH] 5 -1 15.062 0.0 0.0 1.5053 0.0 0.0 346.2516885932037 0.0 346.2516885932037 0.0 1.6334835803019114 0.0 0.0 0 0.0 0.0 0.0 0.0 DVV[WH] 1.5053 - 144 + 1 1.278 40162.2 1.0 7911 4776 12675 HBL1_DMSO_200M_050219_2,12689 HBL1_DMSO_200M_050219_2,12689,LSERRLDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12690 67.788 37.0 931430.0 25 0 42577.0 + 15589 IPYPLSENNQV 11 78 637.3246690404161 1272.634785147632 2 637.3244506716728 MULTI CID FTMS 0 0 0 12675 1670034.5 0.1982804924758263 -10 0.9731063842773438 15 Unmodified _IPYPLSENNQV_ ENSG00000104549|ENST00000265896|SQLE 71.92227651296345 0.0268337859456942 4 [{I|L}P]YP{I|L}SENNQV 11 0 + 82.185 0.0 0.0 6.4579 6.4579 75.841 0.0 0.0 0.0 1.179767852945929 8.050088832413522 1.179767852945929 1.179767852945929 0 0.4929928190999391 1.2218487496163564 0.805462187404089 0.5 + + [{I|L}P]YP{I|L}SENNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENNQV;[{I|L}P]YP{I|L}SENGGQV;[{I|L}P]YP{I|L}SEGGNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SEGGNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENGGQV;[{I|L}P]YP{I|L}SEGGGGQV;{I|L}{I|L}{M(Oxidation (M))|F}P{I|L}SENNQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SEGGGGQV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[QT]ES{I|L}PQQV 6.4579;6.3652;5.7406;5.7406;5.6479;5.6479;4.6328;4.5972;4.5401;4.0123 +;-;-;-;-;-;-;-;-;- + 283 1 1.278 32657.3 1.0 7912 4776 12675 HBL1_DMSO_200M_050219_2,12690 HBL1_DMSO_200M_050219_2,12690,IPYPLSENNQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12691 67.79 33.0 1715700.0 25 0 131220.0 + 32146 RVPSDPFTGV 10 87 537.7838437128545 0 537.7835571169853 PEAK CID FTMS 0 0 0 12675 1416339.5 0.9560564967527776 -1 0.1696548461914062 16 Unmodified _RVPSDPFTGV_ ENSG00000185019|ENST00000217173|UBOX5;nc|ENSG00000185019|O94941-2|UBOX5 49.55428908609986 0.051331770361836 4 T{M(Oxidation (M))|F}P{[QS]|[NT]}{I|L} 6 8 31.814 0.0 0.0 2.9634 0.0 0.0 174.10319660364013 223.07319055728752 397.1763871609277 0.0 0.0 0.0 0.0 0 1.110924374808178 0.0 0.7059771852360797 0.0 T{M(Oxidation (M))|F}P{[QS]|[NT]}{I|L} 2.9634 - 154 + 1 1.278 52533.7 1.0 7913 4776 12675 HBL1_DMSO_200M_050219_2,12691 HBL1_DMSO_200M_050219_2,12691,RVPSDPFTGV True True RVPSDPFTGV 67.789631 537.783557116985 12211930.0 12675.0 ENSG00000185019|ENST00000217173|UBOX5;;nc|ENSG00000185019|O94941-2|UBOX5 6.834665139516194 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12692 67.791 75.0 1077500.0 25 0 110690.0 + 39421 VALLVGEKV 9 99 464.297485016023 926.580417098846 2 464.2977783083916 MULTI CID FTMS 0 0 0 12675 1153775.0 0.8526973660628998 1 -0.0353240966796875 17 Unmodified _VALLVGEKV_ ENSG00000136819|ENST00000372447|C9orf78;ENST00000461762.5_1_9:132595912-132596119:-|nuORF 53.31671820480216 0.0330978755772958 4 VA{I|L}{I|L}VGEKV 9 0 + 89.738 0.0 0.0 9.6848 9.6848 99.554 0.0 0.0 0.0 66.80584747812658 12.252684618815096 12.252684618815096 89.7376724921338 0 0.9247425010840048 1.5228787452803376 0.9749073637206092 0.2059771852360797 + + VA{I|L}{I|L}VGEKV 9.6848 + + 318 + 1 1.278 65817.1 1.0 7914 4776 12675 HBL1_DMSO_200M_050219_2,12692 HBL1_DMSO_200M_050219_2,12692,VALLVGEKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12693 67.793 40.0 926610.0 25 0 104430.0 + 41356 VPKALEPYV 9 73 508.2958858558062 1014.5772187784124 2 508.2950927615166 MULTI CID FTMS 0 0 0 12675 726437.875 0.1543067587573388 4 -0.2589569091796875 18 Unmodified _VPKALEPYV_ ENSG00000183434|ENST00000310125|TFDP3;ENSG00000198176|ENST00000375370|TFDP1;ENST00000453595.1_1_X:36980271-36981156:-|nuORF;ENST00000544902.5_1_13:114277566-114294579:+|nuORF;nc|ENSG00000198176|Q14186-2|TFDP1 14.838274106304384 0.4350285940865338 4 [VP][WR]VPYV 8 4 + 28.28 0.0 0.0 2.7874 2.7874 72.601 0.0 0.0 0.0 4.894549897933878 14.78524061761697 4.894549897933878 8.010299956639813 0 0.718765315847925 1.0457574905606752 0.0 0.0 [VP][WR]VPYV;[VP][WR]PVYV;[VP][WR]PYVV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[HK]PYV;[VP][WR]{M(Oxidation (M))|F}{I|L}VV 2.7874;1.9979;1.7012;1.3631;1.3089 -;-;-;-;- 62 1 1.278 35173.8 1.0 7915 4776 12675 HBL1_DMSO_200M_050219_2,12693 HBL1_DMSO_200M_050219_2,12693,VPKALEPYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12694 67.798 288.0 457650.0 25 0 53442.0 + 42816 VVLDDVELREA 11 105 629.338067505776 1256.661582078352 2 629.8395873904228 MULTI CID FTMS 0 0 0 12675 726581.0 1.0 0 0.0 19 Unmodified _VVLDDVELREA_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 31.635753872319068 0.3493854641218054 4 VV{I|L}DDVE{I|L} 8 3 67.6 0.0 0.0 5.3793 0.0 0.0 0.0 371.1705428246122 371.1705428246122 39.24987554650805 0.0 0.0 0.0 0 1.3979400086720375 2.0 0.0 0.0 + VV{I|L}DDVE{I|L} 5.3793 + + 1063 + 1 1.278 103217.1 1.0 7916 4776 12675 HBL1_DMSO_200M_050219_2,12694 HBL1_DMSO_200M_050219_2,12694,VVLDDVELREA False True VVLDDVELREA 67.797843 629.3386 6919562.5 12675.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 6.428554852803548 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12695 67.803 291.0 515390.0 25 0 30519.0 + 32334 RYMDAWNTV 9 170 578.2661635986663 1154.5177742641324 2 578.2662231326103 MULTI CID FTMS 0 0 0 12675 721210.125 1.0 0 0.0 20 Unmodified _RYMDAWNTV_ ENSG00000099800|ENST00000215570|TIMM13 92.65332237495696 0.0139087009896299 4 {NN|[MP]|[D{I|L}]|[EV]}YMNWNTV 9 4 + 72.698 0.0 0.0 6.2968 6.2968 73.514 0.0 0.0 0.0 0.4272919723798765 9.59115759450254 0.4272919723798765 0.3003327262797626 0 0.7396518287104438 1.5228787452803376 0.5994850021680094 1.066901560044258 {NN|[MP]|[D{I|L}]|[EV]}YMNWNTV;{NN|[MP]|[D{I|L}]|[EV]}Y{[CA]|SS}AWNTV;[{I|L}P]HCDAWNTV;{NN|[MP]|[D{I|L}]|[EV]}Y{[CA]|SS}AEGNTV;[{I|L}P]HCDAEGNTV;{NN|[MP]|[D{I|L}]|[EV]}YMGGWNTV;{NN|[MP]|[D{I|L}]|[EV]}YMNWGGTV;[{I|L}P]HCWWNTV;{NN|[MP]|[D{I|L}]|[EV]}Y{[CA]|SS}AWGGTV;{NN|[MP]|[D{I|L}]|[EV]}Y{[CA]|SS}AEGGGTV 6.2968;6.2708;6.2598;6.1664;6.1554;5.4992;5.4992;5.4775;5.477;5.3757 -;-;-;-;-;-;-;-;-;- 3452 1 1.278 116526.4 1.0 7917 4776 12675 HBL1_DMSO_200M_050219_2,12695 HBL1_DMSO_200M_050219_2,12695,RYMDAWNTV True True RYMDAWNTV 67.803187 578.26622313261 3438937.0 12675.0 ENSG00000099800|ENST00000215570|TIMM13 7.289273262023926 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12697 67.807 2.8 14755000.0 25 0 2111900.0 + 29943 QSLPCFGDQL 10 73 554.2618487379431 1106.509144542686 2 554.2627441287041 MULTI CID FTMS 0 0 0 12696 19312016.0 0.701271409240623 1 -0.1130828857421875 1 Unmodified _QSLPCFGDQL_ REV__ENST00000498461.1_1_10:45938876-45939636:+|nuORF 22.736283301280096 0.4578556481593033 4 {[QS]|[NT]}{I|L}P 4 -1 31.432 0.0 0.0 2.8406 0.0 0.0 0.0 678.2567696249704 678.2567696249704 19.44181124177012 0.0 0.0 0.0 0 0.0 1.0 0.6694451763165201 0.3054621874040891 {[QS]|[NT]}{I|L}P 2.8406 + + 94 1 1.278 37377.5 1.0 7918 4777 12696 HBL1_DMSO_200M_050219_2,12697 HBL1_DMSO_200M_050219_2,12697,QSLPCFGDQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12698 67.813 335.0 436970.0 25 0 52906.0 + 32523 SALPVSPSI 9 145 435.7505010093865 869.486449085573 2 435.7504455447197 MULTI CID FTMS 0 0 0 12696 60118.46484375 0.0890038203167288 1 -0.1130828857421875 2 Unmodified _SALPVSPSI_ ENSG00000115109|ENST00000263713|EPB41L5;ENST00000461128.1_1_2:120849230-120885432:+|nuORF;ENST00000489017.5_1_2:120849230-120859177:+|nuORF;nc|ENSG00000115109|Q9HCM4-2|EPB41L5;nc|ENSG00000115109|Q9HCM4-3|EPB41L5;nc|ENSG00000115109|Q9HCM4-4|EPB41L5 54.773552608820026 0.0299037012502309 4 [{I|L}V]A[PS]SPS{I|L} 9 4 + 50.582 0.0 0.0 5.8175 5.8175 79.345 0.0 0.0 0.0 21.12704280191288 4.471580313422194 4.471580313422194 4.471580313422194 0 0.0 1.3979400086720375 0.9489700043360187 0.0 [{I|L}V]A[PS]SPS{I|L};[{I|L}V]A[PS]SPTV;[{I|L}V]A[RD]PS{I|L};[{I|L}V]A[RD]PTV;[{I|L}V]A[PS]STPV;[{I|L}V]A[PS]STVP;[{I|L}T]TSVP[RP];[{I|L}V]A[RD]TPV;[PS]VT[{I|L}T][RP];[{I|L}V]A[RD]TVP 5.8175;5.3032;4.9301;4.4159;4.0402;3.3303;3.1533;3.1529;2.7192;2.4429 -;-;-;-;-;-;-;-;-;- 519 + 1 1.278 119358.3 1.0 7919 4777 12696 HBL1_DMSO_200M_050219_2,12698 HBL1_DMSO_200M_050219_2,12698,SALPVSPSI True True SALPVSPSI 67.813339 435.75044554472 1547646.375 12696.0 nc|ENSG00000115109|Q9HCM4-3|EPB41L5;;ENSG00000115109|ENST00000263713|EPB41L5;;nc|ENSG00000115109|Q9HCM4-4|EPB41L5;;ENST00000461128.1_1_2:120849230-120885432:+|nuORF;;ENST00000489017.5_1_2:120849230-120859177:+|nuORF;;nc|ENSG00000115109|Q9HCM4-2|EPB41L5 4.970328489939372 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12699 67.815 15.0 3151500.0 25 0 326900.0 + 42182 VSDTMPDQL 9 69 503.23217100274496 1004.44978907229 2 503.2318908572197 MULTI CID FTMS 0 0 0 12696 2510189.5 0.1278927565177074 -12 1.1077041625976562 3 Unmodified _VSDTMPDQL_ REV__ENST00000441030.5_1_21:44493409-44496891:-|nuORF 10.823927491677226 0.5436922275383211 4 {I|L} 1 -1 12.218 0.0 0.0 1.2164 0.0 0.0 873.3547553582259 0.0 873.3547553582259 0.0 2.303654192657465 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2164 + + 26 + 1 1.278 42854.2 1.0 7920 4777 12696 HBL1_DMSO_200M_050219_2,12699 HBL1_DMSO_200M_050219_2,12699,VSDTMPDQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12700 67.817 92.0 1193700.0 25 0 82132.0 + 12927 GYTQAVHCL 9 129 331.16100712044613 990.4611919615384 3 331.1605407595634 MULTI CID FTMS 0 0 0 12696 1173221.125 0.3443656958710102 -5 0.4513397216796875 4 Unmodified _GYTQAVHCL_ REV__ENSG00000008838|ENST00000394128|MED24;REV__nc|ENSG00000008838|O75448-2|MED24 7.289230182591677 0.6602208344931196 4 GVN 3 -1 22.307 0.0 0.0 2.2522 0.0 0.0 178.0845622092117 539.2224215143186 717.3069837235303 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 GVN 2.2522 - 555 + 1 1.278 89378.7 1.0 7921 4777 12696 HBL1_DMSO_200M_050219_2,12700 HBL1_DMSO_200M_050219_2,12700,GYTQAVHCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12701 67.818 73.0 1516700.0 25 0 167540.0 + 38811 TVFHECNR 8 88 335.82397606874986 1004.4500988064495 3 335.8235046267509 MULTI CID FTMS 0 0 0 12696 755948.8125 0.0766605860530754 -12 1.1077041625976562 5 Unmodified _TVFHECNR_ REV__ENSG00000133321|ENST00000255688|PLAAT4;REV__ENST00000537871.1_1_11:63304294-63313725:+|nuORF;REV__ENST00000544107.1_1_11:63304348-63313725:+|nuORF;REV__nc|ENSG00000133321|Q9UL19-2|PLAAT4 11.640296217721598 0.738950129755968 4 TVT 3 -1 31.682 0.0 0.0 3.1542 0.0 0.0 0.0 700.2635879335177 700.2635879335177 14.757724967479856 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 TVT 3.1542 - 145 + 1 1.278 91250.2 1.0 7922 4777 12696 HBL1_DMSO_200M_050219_2,12701 HBL1_DMSO_200M_050219_2,12701,TVFHECNR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12702 67.821 139.0 721410.0 25 0 144530.0 + 21065 LPAEVRLV 8 86 448.7817850776136 895.5490172220271 2 448.7815734744072 MULTI CID FTMS 0 0 0 12696 688272.9375 1.0 0 0.0 6 Unmodified _LPAEVRLV_ ENSG00000118420|ENST00000369747|UBE3D;ENST00000237186.10_1_6:83602743-83775466:-|nuORF;ENST00000505226.1_1_6:83748090-83767722:-|nuORF 25.399314129420983 0.5099049743284904 4 {I|L}PAEV 5 3 64.068 0.0 0.0 7.1541 0.0 0.0 0.0 383.2420443170532 383.2420443170532 41.39198151975222 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 + {I|L}PAEV 7.1541 + + 66 + 1 1.278 84915.7 1.0 7923 4777 12696 HBL1_DMSO_200M_050219_2,12702 HBL1_DMSO_200M_050219_2,12702,LPAEVRLV False True LPAEVRLV 67.821016 448.781573474407 2742756.5 12696.0 ENSG00000118420|ENST00000369747|UBE3D;;ENST00000237186.10_1_6:83602743-83775466:-|nuORF;;ENST00000505226.1_1_6:83748090-83767722:-|nuORF 1.3538486162821453 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12703 67.826 297.0 539970.0 25 0 40214.0 14474 IGESHWPQLV 10 147 583.3048244501163 1164.5950959670324 2 583.3046752810478 MULTI CID FTMS 0 0 0 12696 646004.0625 0.221564566115171 -4 0.3632659912109375 7 Unmodified _IGESHWPQLV_ ENST00000482990.1_1_2:27479185-27480240:-|nuORF 15.847184025352805 0.5816416552707754 4 [TP]TSTM{I|L}{I|L} 8 8 49.566 0.0 0.0 4.2561 0.0 0.0 0.0 317.1340020029532 317.1340020029532 12.82612671529931 0.0 0.0 0.0 0 0.0 0.6020599913279624 2.5743923658886185 0.0 [TP]TSTM{I|L}{I|L} 4.2561 - 3102 1 1.278 123956.3 1.0 7924 4777 12696 HBL1_DMSO_200M_050219_2,12703 HBL1_DMSO_200M_050219_2,12703,IGESHWPQLV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12704 67.828 91.0 862220.0 25 0 76543.0 + 25025 MPRGKFLVV 9 94 349.54441373695704 1045.611411811071 3 349.5438720583916 MULTI CID FTMS 0 0 0 12696 625941.9375 1.0 0 0.0 8 Unmodified _MPRGKFLVV_ ENSG00000205413|ENST00000379958|SAMD9 16.149105407346934 0.3995459350917656 4 M{I|L}M 3 7 20.177 0.0 0.0 1.9297 0.0 0.0 0.0 667.4070103037938 667.4070103037938 2.218487496163561 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L}M 1.9297 - 159 + 1 1.278 76849.5 1.0 7925 4777 12696 HBL1_DMSO_200M_050219_2,12704 HBL1_DMSO_200M_050219_2,12704,MPRGKFLVV False True MPRGKFLVV 67.828462 349.543872058392 2871300.75 12696.0 ENSG00000205413|ENST00000379958|SAMD9 3.789340575536092 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12705 67.835 377.0 322540.0 25 0 21158.0 + 35945 SVPGKDAIYSL 11 144 575.3108442096923 1148.6071354861845 2 575.3113281130791 MULTI CID FTMS 0 0 0 12696 365947.15625 0.8045987617888473 3 -0.2236328125 9 Unmodified _SVPGKDAIYSL_ ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4 34.93206674587334 0.2904649469012649 4 K[Y{I|L}]YTVYS{I|L} 9 8 + 52.655 0.0 0.0 4.5843 4.5843 75.872 0.0 0.0 0.0 21.792685987848195 0.7378621416091846 0.7378621416091846 5.968548725623144 0 0.6237125054200234 0.0 1.055462187404089 0.0 K[Y{I|L}]YTVYS{I|L};[VS]PNA{I|L}YS{I|L}[VS];[VS]W{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}S{I|L}W;K[Y{I|L}]YTVYTV;[VS]PNA{I|L}SY{I|L}[VS];[VS]PNAY{I|L}S{I|L}[VS];[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]H{I|L}S{I|L}W;[VS][HV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HPT{I|L};K[Y{I|L}]YTV{I|L}SY;[VS][{M(Oxidation (M))|F}V][H{I|L}]HPT{I|L} 4.5843;4.0646;4.0133;3.8224;3.7543;3.6493;3.3664;3.3349;3.3186;3.205 -;-;-;-;-;-;-;-;-;- 1551 + 1 1.278 97030.4 1.0 7926 4777 12696 HBL1_DMSO_200M_050219_2,12705 HBL1_DMSO_200M_050219_2,12705,SVPGKDAIYSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12706 67.844 476.0 576440.0 25 0 61408.0 + 4232 DAPKVLLP 8 206 426.7634176844998 851.5122824357996 2 426.7634155154228 MULTI CID FTMS 0 0 0 12696 349255.75 1.0 0 0.0 10 Unmodified _DAPKVLLP_ ENSG00000175305|ENST00000308108|CCNE2;nc|ENSG00000175305|O96020-2|CCNE2 36.04419817259434 0.3004715606373109 4 [KP]V{I|L}W{I|L}P 7 3 [KP]V{I|L}W + + 21.198 6.7778 1.0873 2.4894 2.4894 45.073 0.0 0.0 0.0 0.0 6.12970016046013 0.0 0.0 0 0.5 0.0 0.0 0.0 [KP]V{I|L}W{I|L}P 2.4894 - 288 + 1 1.278 212296.4 1.0 7927 4777 12696 HBL1_DMSO_200M_050219_2,12706 HBL1_DMSO_200M_050219_2,12706,DAPKVLLP False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12707 67.851 428.0 919670.0 25 0 97010.0 -1 0 111 979.4863806345644 1956.9582083359285 2 979.4910766482352 MULTI CID FTMS 0 0 0 -1 0 11 4 {[QS]|[NT]}[C(Carbamidomethyl (C))R]TVT{M(Oxidation (M))|F}KTVTN{I|L}C{[TV]|[{I|L}S]} 17 -1 {[QS]|[NT]}[C(Carbamidomethyl (C))R]TVT{M(Oxidation (M))|F}K + + 54.964 27.895 2.5186 2.8086 2.8086 45.55 0.0 0.0 0.0 0.0 9.691702189165674 0.0 0.0 0 0.0 0.0 1.7658715643802765 1.6237125054200234 {[QS]|[NT]}[C(Carbamidomethyl (C))R]TVT{M(Oxidation (M))|F}KTVTN{I|L}C{[TV]|[{I|L}S]} 2.8086 - 10840 + 1 1.278 251657.0 1.0 7928 4777 12696 HBL1_DMSO_200M_050219_2,12707 HBL1_DMSO_200M_050219_2,12707, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12708 67.854 103.0 1245500.0 25 0 134780.0 + + 20884 DGRISVYSI 9 137 505.2956289931484 1008.5767050530968 2 505.7969848513603 MULTI CID FTMS 0 0 0 12696 293137.46875 0.7937226318012177 -5 0.4513397216796875 12 Unmodified _LMPLHAKTV_ nc|ENSG00000138674|O94979-8|SEC31A;ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-5|SEC31A;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A 20.453626601364224 0.2830276176381075 4 SYV{M(Oxidation (M))|F}YS{I|L} 7 -1 36.675 0.0 0.0 3.6363 0.0 0.0 131.1480589560093 0.0 131.1480589560093 0.0 8.1011902278882 0.0 0.0 0 0.0 0.0 0.5484550065040282 0.0 SYV{M(Oxidation (M))|F}YS{I|L} 3.6363 - 1533 + 1 1.278 102775.0 1.0 7929 4777 12696 HBL1_DMSO_200M_050219_2,12708 HBL1_DMSO_200M_050219_2,12708,LMPLHAKTV False False DGRISVYSI 67.853522 505.79698485136 3290601.0 12696.0 nc|ENSG00000138674|O94979-8|SEC31A;;ENSG00000138674|ENST00000395310|SEC31A;;nc|ENSG00000138674|O94979-5|SEC31A;;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;;nc|ENSG00000138674|O94979-6|SEC31A;;nc|ENSG00000138674|O94979-9|SEC31A;;nc|ENSG00000138674|O94979-3|SEC31A;;nc|ENSG00000138674|O94979-2|SEC31A;;nc|ENSG00000138674|O94979-10|SEC31A;;nc|ENSG00000138674|O94979-7|SEC31A;;nc|ENSG00000138674|O94979-4|SEC31A 1.880907694498698 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12709 67.856 92.0 2559100.0 25 0 385310.0 + 20751 LLSSNLCSL 9 149 475.253045510102 948.491538087004 2 475.2528564333916 MULTI CID FTMS 0 0 0 12696 290668.125 0.1768212798273203 -5 0.4513397216796875 13 Unmodified _LLSSNLCSL_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 111.28704002717404 0.0050101734347035 4 {[TV]|[{I|L}S]}VTN{I|L}CS{I|L} 9 3 + 83.89 0.0 0.0 8.8445 8.8445 91.023 0.0 0.0 0.0 11.67716334940377 46.97465806604499 11.67716334940377 7.78151250383641 0 2.2064608101803795 1.2218487496163564 1.289816691347048 1.0387254899964358 {[TV]|[{I|L}S]}VTN{I|L}CS{I|L};{[TV]|[{I|L}S]}TVN{I|L}CS{I|L};{[TV]|[{I|L}S]}VTGG{I|L}CS{I|L};{[TV]|[{I|L}S]}TVGG{I|L}CS{I|L};{[TV]|[{I|L}S]}Q[VS]{I|L}CS{I|L};{[TV]|[{I|L}S]}VTCQVS{I|L};{[SA]|[TG]}Y{I|L}[PA]TQV;{[TV]|[{I|L}S]}VTCVTQV;{[TV]|[{I|L}S]}VTCEV[KA];{[SA]|[TG]}Y{I|L}[PA]QS{I|L} 8.8445;8.0241;6.7786;5.9582;5.9293;5.462;5.2347;5.1683;5.1024;5.0746 -;-;-;-;-;-;-;-;-;- 3126 1 1.278 181862.2 1.0 7930 4777 12696 HBL1_DMSO_200M_050219_2,12709 HBL1_DMSO_200M_050219_2,12709,LLSSNLCSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12710 67.866 516.0 519560.0 25 0 30338.0 21248 LPDPTGRR 8 219 456.25722743548783 0 456.2564269900322 PEAK CID FTMS 0 0 0 12696 284161.625 0.5068582595152157 5 -0.2700958251953125 14 Unmodified _LPDPTGRR_ ENST00000290552.7_1_16:55358558-55358915:+|nuORF 10.183394434864962 0.5394990767616434 4 SV 2 8 10.133 0.0 0.0 1.1129 0.0 0.0 585.3354559922664 136.04097925357658 721.3764352458429 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 SV 1.1129 - 59 + 1 1.278 204397.7 1.0 7931 4777 12696 HBL1_DMSO_200M_050219_2,12710 HBL1_DMSO_200M_050219_2,12710,LPDPTGRR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12711 67.873 419.0 166710.0 25 0 11039.0 + 15494 IPSTELAKQVI 11 122 599.8561795232403 1197.6978061132804 2 599.8559448122978 MULTI CID FTMS 0 0 0 12696 244643.890625 0.442716195703451 3 -0.2236328125 15 Unmodified _IPSTELAKQVI_ ENSG00000099341|ENST00000215071|PSMD8 53.31671820480216 0.0992620867501809 4 {I|L}PSTE{I|L}AKQV{I|L} 11 0 + 59.95 0.0 0.0 5.0055 5.0055 82.361 0.0 0.0 0.0 31.804560644581308 10.66946789630613 10.66946789630613 9.30578591241531 0 1.579689690656103 1.5228787452803376 0.0 0.4247425010840047 + + {I|L}PSTE{I|L}AKQV{I|L};{I|L}P[WM]{I|L}AKQV{I|L};{I|L}PSTE{I|L}AKQ{I|L}V;{I|L}P[WM]{I|L}AKQ{I|L}V 5.0055;4.2285;4.1146;3.3377 +;-;-;- + 3983 + 1 1.278 53388.0 1.0 7932 4777 12696 HBL1_DMSO_200M_050219_2,12711 HBL1_DMSO_200M_050219_2,12711,IPSTELAKQVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12712 67.882 521.0 233330.0 25 0 23882.0 + -1 LCGIFDQPNL 10 163 392.8630554080009 0 392.8630554080009 PEAK CID FTMS 0 0 0 -1 0 16 Carbamidomethyl (C) _LC(Carbamidomethyl (C))GIFDQPNL_ REV__ENSG00000187288|ENST00000336832|CIDEC;REV__nc|ENSG00000187288|Q96AQ7-2|CIDEC;REV__nc|ENSG00000187288|Q96AQ7-4|CIDEC 26.020703789607367 0.2497782813260881 4 KQQ{I|L}E 5 -1 17.462 0.0 0.0 2.2282 0.0 0.0 74.32399792362055 80.01505457095936 154.3390524945799 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4326217639455209 0.3494850021680094 KQQ{I|L}E 2.2282 - 111 + 1 1.278 98246.1 1.0 7933 4777 12696 HBL1_DMSO_200M_050219_2,12712 HBL1_DMSO_200M_050219_2,12712,LCGIFDQPNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12713 67.892 537.0 256030.0 25 0 35475.0 -1 0 171 378.6997253298759 0 378.6997253298759 PEAK CID FTMS 0 0 0 -1 0 17 4 D{M(Oxidation (M))|F}TK 4 -1 14.165 0.0 0.0 1.8752 0.0 0.0 147.06778271308752 114.05671869449452 261.12450140758204 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.1803115997617927 D{M(Oxidation (M))|F}TK 1.8752 - 35 + 1 1.278 112251.7 1.0 7934 4777 12696 HBL1_DMSO_200M_050219_2,12713 HBL1_DMSO_200M_050219_2,12713, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12714 67.9 440.0 263560.0 25 0 13222.0 -1 CGCSSASCCTV 11 158 624.7105630917671 1247.406573250334 2 624.7110473513603 MULTI CID FTMS 0 0 0 12696 193462.359375 0.4311549966009991 1 -0.1130828857421875 18 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))GC(Carbamidomethyl (C))SSASC(Carbamidomethyl (C))C(Carbamidomethyl (C))TV_ ENSG00000143507|ENST00000366899|DUSP10 5.731851221503515 0.8481046878870278 4 {[QG]|[NA]}W 3 -1 23.391 0.0 0.0 1.8751 0.0 0.0 0.0 873.2224052022951 873.2224052022951 8.353481135844877 0.0 0.0 0.0 0 0.4247425010840047 0.494850021680094 0.0 0.6747425010840047 {[QG]|[NA]}W 1.8751 - 307 1 1.278 88875.9 1.0 7935 4777 12696 HBL1_DMSO_200M_050219_2,12714 HBL1_DMSO_200M_050219_2,12714,CGCSSASCCTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12715 67.909 451.0 853940.0 25 0 55694.0 + -1 GCCCNCCCCLC 11 129 649.6578246951103 0 649.6578246951103 PEAK CID FTMS 0 0 0 -1 0 19 3 Carbamidomethyl (C) _GC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))NCCCCLC_ REV__ENSG00000147570|ENST00000276570|DNAJC5B 0.0 0.4761840153648598 4 YHHTN{I|L}EG 8 -1 31.648 0.0 0.0 2.4395 0.0 0.0 210.81508679080804 132.04604517154533 342.8611319623534 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3283409326844269 0.5 YHHTN{I|L}EG 2.4395 - 1510 + 1 1.278 277186.6 1.0 7936 4777 12696 HBL1_DMSO_200M_050219_2,12715 HBL1_DMSO_200M_050219_2,12715,GCCCNCCCCLC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12716 67.916 416.0 354660.0 25 0 24753.0 + 16388 IYQQIIQTY 9 159 585.3136030882148 1168.6126532432295 2 585.3133422732353 MULTI CID FTMS 0 0 0 12696 171761.8125 0.1885875332861896 -3 0.2506332397460937 20 Unmodified _IYQQIIQTY_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000467785.5_1_7:158424360-158447992:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 54.773552608820026 0.0299037012502309 4 {I|L}{I|L}{I|L}HTY 6 4 46.474 0.0 0.0 3.9769 0.0 0.0 410.17981256792274 0.0 410.17981256792274 0.0 17.856632643971324 0.0 0.0 0 0.2887254899964357 0.0 0.5451140161145328 0.0 {I|L}{I|L}{I|L}HTY 3.9769 - 2704 + 1 1.278 112142.5 1.0 7937 4777 12696 HBL1_DMSO_200M_050219_2,12716 HBL1_DMSO_200M_050219_2,12716,IYQQIIQTY True True IYQQIIQTY 67.91633 585.3128 6918741.5 12696.0 ENST00000467785.5_1_7:158424360-158447992:-|nuORF;;nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENSG00000146918|ENST00000356309|NCAPG2 5.837423801422119 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12718 67.92 7.1 7040200.0 25 0 407410.0 -1 0 59 873.9146114817958 1745.8146700303914 2 873.9154540896416 MULTI CID FTMS 0 0 0 12717 8610578.0 1.0 0 0.0 1 4 [MN]PN{I|L}NEAQA[QP]N{I|L} 14 -1 92.706 0.0 0.0 5.3102 0.0 0.0 0.0 208.0739840143188 208.0739840143188 69.19215424423022 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.3807196863200844 1.579689690656103 [MN]PN{I|L}NEAQA[QP]N{I|L} 5.3102 - 674 + 1 1.243 40068.0 1.0 7938 4778 12717 HBL1_DMSO_200M_050219_2,12718 HBL1_DMSO_200M_050219_2,12718, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12719 67.922 20.0 2888600.0 25 0 271490.0 21818 LPNLSSLTL 9 93 479.2845797869575 956.554606640715 2 479.2851745486259 MULTI CID FTMS 0 0 0 12717 1004138.8125 0.0664750683443343 4 -0.157012939453125 2 Unmodified _LPNLSSLTL_ ENSG00000178732|ENST00000692618|GP5 23.1484247019978 0.2366544122328345 4 [{I|L}P][NS]{I|L} 5 4 21.949 0.0 0.0 2.2946 0.0 0.0 0.0 429.2342080413587 429.2342080413587 1.983842625304959 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 [{I|L}P][NS]{I|L} 2.2946 - 193 1 1.243 56198.6 1.0 7939 4778 12717 HBL1_DMSO_200M_050219_2,12719 HBL1_DMSO_200M_050219_2,12719,LPNLSSLTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12720 67.923 5.0 7316400.0 25 0 467670.0 + 37108 TGTTHTATTV 10 71 495.2493582655393 988.4841635978786 2 495.2495300173759 MULTI CID FTMS 0 0 0 12717 6222466.0 0.6487031131560212 -11 1.0779037475585938 3 Unmodified _TGTTHTATTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 22.736283301280096 0.4578556481593033 4 TGY{I|L} 4 8 47.294 0.0 0.0 4.7845 0.0 0.0 0.0 551.2478731744749 551.2478731744749 19.106829096975275 0.0 0.0 0.0 0 0.3807196863200844 1.154901959985743 0.0 0.0 TGY{I|L} 4.7845 - 108 + 1 1.243 36270.2 1.0 7940 4778 12717 HBL1_DMSO_200M_050219_2,12720 HBL1_DMSO_200M_050219_2,12720,TGTTHTATTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12721 67.924 18.0 2466300.0 25 0 216720.0 -1 TVHCSACSV 9 83 510.71496761258777 1019.4153822919756 2 511.2171508669853 MULTI CID FTMS 0 0 0 12717 3999514.5 0.871630602568179 -4 0.3637161254882812 4 2 Carbamidomethyl (C) _TVHC(Carbamidomethyl (C))SAC(Carbamidomethyl (C))SV_ ENSG00000162664|ENST00000340281|ZNF326;ENST00000394583.7_1_1:90470639-90493257:+|nuORF;nc|ENSG00000162664|Q5BKZ1-3|ZNF326 12.531546534597751 0.4974689918368763 4 TV 2 -1 16.682 0.0 0.0 1.6365 0.0 0.0 801.2877863220522 0.0 801.2877863220522 0.0 5.885540741363187 0.0 0.0 0 0.0 0.0 0.5 0.0 TV 1.6365 + + 34 + 1 1.243 37740.8 1.0 7941 4778 12717 HBL1_DMSO_200M_050219_2,12721 HBL1_DMSO_200M_050219_2,12721,TVHCSACSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12722 67.925 59.0 1906300.0 25 0 78599.0 -1 RCHRRRRRCCC 11 94 866.9066694051579 1731.7987858771155 2 866.9087402224541 MULTI CID FTMS 0 0 0 12717 1967179.75 0.1397699619380137 6 -0.2078933715820312 5 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 4 [MN]PN{I|L}NADQSV{[SA]|[TG]}M{I|L}Q 16 -1 + 110.48 0.0 0.0 6.3794 6.3794 84.169 0.0 0.0 0.0 78.9638190872904 12.575608550948942 12.575608550948942 6.709412807357751 0 1.1861818737241734 1.5228787452803376 0.3494850021680094 2.635151878060192 [MN]PN{I|L}NADQSV{[SA]|[TG]}M{I|L}Q;[MN]PN{I|L}NWQSV{[SA]|[TG]}M{I|L}Q;[MN]PN{I|L}GGADQSV{[SA]|[TG]}M{I|L}Q;[MN]PGG{I|L}NADQSV{[SA]|[TG]}M{I|L}Q;[MN]PN{I|L}NAD[AG]SV{[SA]|[TG]}M{I|L}Q;[MN]NP{I|L}NADQSV{[SA]|[TG]}M{I|L}Q;[MN]PN{I|L}NADQ[DG][R{M(Oxidation (M))|F}]{I|L}Q;[MN]PGG{I|L}NWQSV{[SA]|[TG]}M{I|L}Q;[MN]PN{I|L}NW[AG]SV{[SA]|[TG]}M{I|L}Q;[MN]PN{I|L}GGWQSV{[SA]|[TG]}M{I|L}Q 6.3794;5.992;5.859;5.859;5.859;5.7166;5.5221;5.4705;5.4705;5.4705 -;-;-;-;-;-;-;-;-;- 5087 + 1 1.243 80177.0 1.0 7942 4778 12717 HBL1_DMSO_200M_050219_2,12722 HBL1_DMSO_200M_050219_2,12722,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12723 67.927 24.0 2050400.0 25 0 251170.0 + 4428 DAVVSFAHV 9 69 472.7457782407844 943.4770035483688 2 472.7458373904228 MULTI CID FTMS 0 0 0 12717 1720669.125 0.8705762940786329 -1 0.1130828857421875 6 Unmodified _DAVVSFAHV_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 44.40701690623563 0.0526327925666318 4 {[DA]|[EG]}VVS{M(Oxidation (M))|F}AHV 9 0 {[DA]|[EG]}V + + 36.33 27.447 9.6262 3.8506 3.8506 48.189 0.0 0.0 0.0 0.0 -0.7831231186173397 -0.7831231186173397 0.0 0 0.4247425010840047 0.0 0.8494850021680094 0.0 + + {[DA]|[EG]}VVS{M(Oxidation (M))|F}AHV 3.8506 + + 132 + 1 1.243 45957.2 1.0 7943 4778 12717 HBL1_DMSO_200M_050219_2,12723 HBL1_DMSO_200M_050219_2,12723,DAVVSFAHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12724 67.928 38.0 2241800.0 25 0 149400.0 -1 0 68 986.483511414154 1970.952469895108 2 986.9876586794852 MULTI CID FTMS 0 0 0 12717 1411772.625 0.3864316622262295 -11 1.0779037475585938 7 4 [HV]Y[{I|L}T]VVG 8 -1 28.025 0.0 0.0 1.4219 0.0 0.0 0.0 1099.4483272779198 1099.4483272779198 -2.5664608273916123 0.0 -2.5664608273916123 0.0 0 0.0 0.0 0.8639829889124311 0.0 [HV]Y[{I|L}T]VVG 1.4219 - 396 1 1.243 61886.7 1.0 7944 4778 12717 HBL1_DMSO_200M_050219_2,12724 HBL1_DMSO_200M_050219_2,12724, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12725 67.931 178.0 1172600.0 25 0 191370.0 + 38026 TPAPVPVI 8 75 793.4831346882743 792.4758582216742 1 793.4844848513603 MULTI CID FTMS 0 0 0 12717 1039776.75 1.0 0 0.0 8 Unmodified _TPAPVPVI_ ENSG00000047410|ENST00000367478|TPR;nc|ENSG00000047410|P12270-2|TPR 144.0078715075128 9.367820938772363e-06 4 [TP]APVPV{I|L} 8 0 + 86.737 0.0 0.0 10.945 10.945 97.322 0.0 0.0 0.0 17.04628427264403 16.40978057358332 16.40978057358332 17.04628427264403 0 2.0 1.2218487496163564 1.7174165578762484 0.0 + + [TP]APVPV{I|L};[VP]APTPV{I|L};[PA]TPVPV{I|L};[VP]PATPV{I|L};TPAPVPV{I|L};[VP]T[PA]PV{I|L};[TP]V[PA]PV{I|L};[VP]T[HK]V{I|L};[PA]VPTPV{I|L};{[VA]|[{I|L}G]}PPTPV{I|L} 10.945;8.794;8.4924;8.4142;8.3474;8.0085;7.4354;6.0884;5.7682;5.6682 +;-;-;-;+;-;-;-;-;- + 522 1 1.243 146962.7 1.0 7945 4778 12717 HBL1_DMSO_200M_050219_2,12725 HBL1_DMSO_200M_050219_2,12725,TPAPVPVI True True TPAPVPVI 67.931275 793.48448485136 7654470.0 12717.0 nc|ENSG00000047410|P12270-2|TPR;;ENSG00000047410|ENST00000367478|TPR 7.754713376363118 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12726 67.935 174.0 1156200.0 25 0 99793.0 38883 TVKQNPIEV 9 136 514.2924805386048 1026.5704081440094 2 514.2928954958916 MULTI CID FTMS 0 0 0 12717 866760.625 1.0 0 0.0 9 Unmodified _TVKQNPIEV_ ENSG00000102804|ENST00000458659|TSC22D1;nc|ENSG00000102804|Q15714-4|TSC22D1 58.6788170122104 0.0268135626297836 4 T{I|L}VV[HN]TV 8 6 46.525 0.0 0.0 4.5321 0.0 0.0 145.0733474680713 0.0 145.0733474680713 0.0 28.06454256956867 0.0 0.0 0 1.0501648626366045 0.0 0.9604093769761876 0.0 T{I|L}VV[HN]TV 4.5321 - 706 + 1 1.243 155187.5 1.0 7946 4778 12717 HBL1_DMSO_200M_050219_2,12726 HBL1_DMSO_200M_050219_2,12726,TVKQNPIEV True False RPTDVVLEV 67.934678 514.292895495892 9884580.0 12717.0 ENST00000509182.1_1_5:61688751-61699599:-|nuORF;;ENSG00000086189|ENST00000199320|DIMT1 3.2238961855570474 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12727 67.938 195.0 381570.0 25 0 38665.0 6377 DVYSFQEEEP 10 113 621.7597889825445 1241.5050250318889 2 621.7612182497978 MULTI CID FTMS 0 0 0 12717 732676.1875 0.0646247385312058 5 -0.1837234497070312 10 Unmodified _DVYSFQEEEP_ ENSG00000058056|ENST00000263966|USP13;nc|ENSG00000058056|Q92995-2|USP13 14.838274106304384 0.5985701837916485 4 CS{I|L} 3 9 28.104 0.0 0.0 2.2637 0.0 0.0 920.371432357864 0.0 920.371432357864 0.0 8.764348410275545 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 CS{I|L} 2.2637 - 599 + 1 1.243 58399.7 1.0 7947 4778 12717 HBL1_DMSO_200M_050219_2,12727 HBL1_DMSO_200M_050219_2,12727,DVYSFQEEEP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12728 67.943 221.0 1705300.0 25 0 213020.0 37062 TGGHRVKP 8 224 426.2463273205826 850.4781017079653 2 426.2455932497978 MULTI CID FTMS 0 0 0 12717 650989.9375 0.2752048294332521 -4 0.3637161254882812 11 Unmodified _TGGHRVKP_ ENST00000524517.5_1_10:77098119-77118447:+|nuORF 14.581692164780916 0.6954967302934248 4 {[QS]|[NT]}{I|L}S{I|L}C 6 7 47.901 0.0 0.0 5.6323 0.0 0.0 0.0 216.1627795811528 216.1627795811528 9.418402966525576 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.5545970543767125 0.6747425010840047 {[QS]|[NT]}{I|L}S{I|L}C 5.6323 - 1087 1 1.243 286414.2 1.0 7948 4778 12717 HBL1_DMSO_200M_050219_2,12728 HBL1_DMSO_200M_050219_2,12728,TGGHRVKP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12729 67.946 196.0 1026200.0 25 0 72780.0 + 29953 RVGDHMMFV 9 156 545.7743488765456 1089.534144819891 2 545.7743408083916 MULTI CID FTMS 0 0 0 12717 656655.375 0.7356088730238602 2 -0.1105499267578125 12 Unmodified _QSPQELFEI_ nc|ENSG00000167470|Q504T8|MIDN;ENSG00000167470|ENST00000682408|MIDN 25.399314129420983 0.2080152500878129 4 {M(Oxidation (M))|F}MMHY{M(Oxidation (M))|F}V 7 8 36.931 0.0 0.0 3.3896 0.0 0.0 116.1060714336232 0.0 116.1060714336232 0.0 -0.6387360002479738 -0.6387360002479738 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}MMHY{M(Oxidation (M))|F}V 3.3896 - 2186 + 1 1.243 152572.8 1.0 7949 4778 12717 HBL1_DMSO_200M_050219_2,12729 HBL1_DMSO_200M_050219_2,12729,QSPQELFEI False True RVGDHMMFV 67.946367 545.774340808392 3985632.75 12717.0 nc|ENSG00000167470|Q504T8|MIDN;;ENSG00000167470|ENST00000682408|MIDN 6.863682111104329 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12730 67.95 212.0 435760.0 25 0 32138.0 + 3334 AYMELQQKAEF 11 123 679.3264347582409 1356.6383165832815 2 679.8279296755791 MULTI CID FTMS 0 0 0 12717 595925.375 0.4516932327065715 2 -0.1105499267578125 13 Unmodified _AYMELQQKAEF_ ENSG00000117724|ENST00000366955|CENPF 74.7717668357584 0.0185759530880285 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ME{I|L}QQ 7 4 73.933 0.0 0.0 5.4497 0.0 0.0 0.0 490.23357882476057 490.23357882476057 31.84153486104178 0.0 0.0 0.0 0 2.1237125054200234 2.0 0.0 0.6989700043360187 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ME{I|L}QQ 5.4497 + + 5288 + 1 1.243 70762.9 1.0 7950 4778 12717 HBL1_DMSO_200M_050219_2,12730 HBL1_DMSO_200M_050219_2,12730,AYMELQQKAEF True True AYMELQQKAEF 67.950407 679.827929675579 32752254.0 12717.0 ENSG00000117724|ENST00000366955|CENPF 7.741471767425537 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12731 67.955 224.0 270400.0 25 0 73729.0 + 45708 YYDGDVGNYYY 11 83 696.2747061106709 1390.5348592881417 2 696.2781249880791 MULTI CID FTMS 0 0 0 12717 563476.375 0.0726659782775713 5 -0.1837234497070312 14 Unmodified _YYDGDVGNYYY_ ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF 45.69961567697781 0.1414455360291008 4 YYD[DG]V[NG]YYY 11 0 + 45.066 0.0 0.0 3.2409 3.2409 71.068 0.0 0.0 0.0 8.90347085966453 7.367585652254178 7.367585652254178 5.496812376923039 0 0.3807196863200844 2.0 0.3494850021680094 0.805462187404089 + + YYD[DG]V[NG]YYY;YYD[DG]YV[NG]YY;{[YD]|[{M(Oxidation (M))|F}M]}GDYV[NG]YYY;YYD[DG]VY[NG]YY;{[YD]|[{M(Oxidation (M))|F}M]}GDY[RN]YYY;{[YD]|[{M(Oxidation (M))|F}M]}GDYYV[NG]YY;{[YD]|[{M(Oxidation (M))|F}M]}GDYY[RN]YY;{[YD]|[{M(Oxidation (M))|F}M]}GDYVY[NG]YY;YYD[EP]{[ES]|[DT]|[{I|L}C]}YYY;{[YD]|[{M(Oxidation (M))|F}M]}GDVY[NG]YYY 3.2409;2.8456;2.6006;2.5025;2.4709;2.2053;2.1654;1.8622;1.8476;1.7897 +;-;-;-;-;-;-;-;-;- + 737 1 1.243 50513.6 1.0 7951 4778 12717 HBL1_DMSO_200M_050219_2,12731 HBL1_DMSO_200M_050219_2,12731,YYDGDVGNYYY False True YYDGDVGNYYY 67.954634 696.278124988079 216854424.0 12717.0 ENST00000481281.5_1_1:32757770-32793222:+|nuORF;;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 6.66107718149821 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12732 67.959 228.0 536680.0 25 0 41520.0 + 13562 HPFVLQSV 8 148 463.7591332048684 0 463.7601501345634 PEAK CID FTMS 0 0 0 12717 556447.5625 1.0 0 0.0 15 Unmodified _HPFVLQSV_ ENSG00000188342|ENST00000340473|GTF2F2 36.46614268402704 0.1722802481416658 4 Q{I|L}H{[QG]|[NA]}S 6 6 29.721 0.0 0.0 3.2113 0.0 0.0 204.11322382985549 68.0515383356078 272.1647621654633 0.0 0.0 0.0 0.0 0 0.5 0.0 1.4086280037772752 0.0 Q{I|L}H{[QG]|[NA]}S 3.2113 - 235 + 1 1.243 95610.3 1.0 7952 4778 12717 HBL1_DMSO_200M_050219_2,12732 HBL1_DMSO_200M_050219_2,12732,HPFVLQSV False True HPFVLQSV 67.958909 463.760150134563 3162637.5 12717.0 ENSG00000188342|ENST00000340473|GTF2F2 6.314324378967285 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12733 67.963 217.0 707540.0 25 0 70413.0 + 15889 ISSCIGHNCE 10 176 531.7195680079891 1061.424583082778 2 531.7197753787041 MULTI CID FTMS 0 0 0 12717 500742.3125 0.8992145893185091 -11 1.0779037475585938 16 Unmodified _ISSCIGHNCE_ REV__ENSG00000160318|ENST00000291715|CLDND2 10.073929032068715 0.6785112666868882 4 {[TV]|[{I|L}S]}CSC[Y{I|L}]GT 9 -1 27.596 0.0 0.0 2.5999 0.0 0.0 0.0 131.0302824570431 131.0302824570431 3.159331657774743 0.0 0.0 0.0 0 0.2887254899964357 1.0 0.716296407419885 0.0 {[TV]|[{I|L}S]}CSC[Y{I|L}]GT 2.5999 - 946 1 1.243 119036.3 1.0 7953 4778 12717 HBL1_DMSO_200M_050219_2,12733 HBL1_DMSO_200M_050219_2,12733,ISSCIGHNCE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12734 67.968 281.0 680020.0 25 0 88541.0 -1 0 106 1121.073455730863 0 1121.075366199017 PEAK CID FTMS 0 0 0 12717 397692.71875 0.2865187256419502 -4 0.3637161254882812 17 4 {I|L}[NP]VTVTN{I|L}C 10 -1 56.09 0.0 0.0 2.5039 0.0 0.0 967.4940940981412 215.1037081354125 1182.597802233554 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 1.9876954943324543 {I|L}[NP]VTVTN{I|L}C 2.5039 - 8365 + 1 1.243 124428.6 1.0 7954 4778 12717 HBL1_DMSO_200M_050219_2,12734 HBL1_DMSO_200M_050219_2,12734, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12735 67.973 265.0 344050.0 25 0 53168.0 12324 GSHRPGTV 8 94 810.4249992800466 809.4177228134465 1 810.4263183474541 MULTI CID FTMS 0 0 0 12717 406528.375 0.4474530458184978 2 -0.1105499267578125 18 Unmodified _GSHRPGTV_ ENST00000343939.6_1_16:83982974-83984850:+|nuORF 11.640296217721598 0.738950129755968 4 [YT]VD{I|L}TV 7 6 + 61.776 0.0 0.0 7.6321 7.6321 83.077 0.0 0.0 0.0 4.198500793851629 13.934625873455744 4.198500793851629 3.0102999566398125 0 0.6549471895720985 1.3979400086720375 0.7302046884880937 0.0 [YT]VD{I|L}TV;[YT]V{I|L}DTV;{NN|[MP]|[D{I|L}]|[EV]}S{I|L}YTV;[YT]VDT{I|L}V;[Y{I|L}]SD{I|L}TV;[YT]V{I|L}SEV;{NN|[MP]|[D{I|L}]|[EV]}SY{I|L}TV;[YT]{I|L}VDTV;[YT]VSE{I|L}V;[YT]VS{I|L}EV 7.6321;7.2602;7.1134;6.7654;6.3863;6.3635;6.3397;6.2934;6.1759;6.146 -;-;-;-;-;-;-;-;-;- 904 1 1.243 65422.9 1.0 7955 4778 12717 HBL1_DMSO_200M_050219_2,12735 HBL1_DMSO_200M_050219_2,12735,GSHRPGTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12736 67.98 290.0 703050.0 25 0 81647.0 25006 MPPPVGMV 8 150 414.21211229833 826.40967166346 2 414.2117797732353 MULTI CID FTMS 0 0 0 12717 345450.5 1.0 0 0.0 19 Unmodified _MPPPVGMV_ ENSG00000084070|ENST00000372718|SMAP2;nc|ENSG00000084070|Q8WU79-2|SMAP2;nc|ENSG00000084070|Q8WU79-3|SMAP2 17.086550045450526 0.6584923310065985 4 {[DA]|[EG]}GK{I|L}{I|L} 6 8 38.446 0.0 0.0 4.6522 0.0 0.0 0.0 226.0355014768556 226.0355014768556 15.524526040447055 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 1.055462187404089 0.0 {[DA]|[EG]}GK{I|L}{I|L} 4.6522 - 543 1 1.243 160556.3 1.0 7956 4778 12717 HBL1_DMSO_200M_050219_2,12736 HBL1_DMSO_200M_050219_2,12736,MPPPVGMV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12738 67.986 242.0 366170.0 25 0 41884.0 -1 MILKSFHIE 9 143 588.3117613110437 1174.608969688887 2 588.3119994997978 MULTI CID FTMS 0 0 0 12737 223122.21875 0.6807644183458191 2 -0.0768356323242187 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))ILKSFHIE_ ENST00000375400.7_1_10:29946914-29946953:-|nuORF 13.90604991867851 0.4602628045680013 4 {[QN]|[E{I|L}]|[KN]}NG{I|L}S{I|L}{M(Oxidation (M))|F}WP 10 -1 + 42.091 0.0 0.0 3.5834 3.5834 75.591 0.0 0.0 0.0 11.136618945007594 2.4357557584207328 2.4357557584207328 9.164539485499256 0 0.0138793319624578 0.7958800173440752 1.113982988912431 0.0 {[QN]|[E{I|L}]|[KN]}NG{I|L}S{I|L}{M(Oxidation (M))|F}WP;{[QN]|[E{I|L}]|[KN]}GGG{I|L}S{I|L}{M(Oxidation (M))|F}WP;{NN|[MP]|[D{I|L}]|[EV]}QG{I|L}S{I|L}{M(Oxidation (M))|F}WP;[Q{I|L}]DG{I|L}S{I|L}{M(Oxidation (M))|F}WP;[{I|L}A]GDG{I|L}S{I|L}{M(Oxidation (M))|F}WP;{[QN]|[E{I|L}]|[KN]}NG[YV]VVWP;{[QV]|[N{I|L}]|[RA]|[KV]}EG{I|L}S{I|L}{M(Oxidation (M))|F}WP;{[QN]|[E{I|L}]|[KN]}N[MT][RK]V{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}[AG]G{I|L}S{I|L}{M(Oxidation (M))|F}WP;{[MG]|[TS]}{I|L}{M(Oxidation (M))|F}{I|L}S{I|L}[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F} 3.5834;2.8032;2.6353;2.3933;2.3577;2.2901;1.9969;1.904;1.8551;1.7629 -;-;-;-;-;-;-;-;-;- 2924 1 1.243 68714.5 1.0 7957 4779 12737 HBL1_DMSO_200M_050219_2,12738 HBL1_DMSO_200M_050219_2,12738,MILKSFHIE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12739 67.987 35.0 2430200.0 25 0 399730.0 -1 0 80 322.2109273084506 642.4073016837012 2 322.2105285525322 MULTI CID FTMS 0 0 0 12737 1758329.25 0.4189391887110597 -3 0.2117385864257812 2 4 {[QN]|[E{I|L}]|[KN]}{I|L}R{I|L} 5 -1 + 46.682 0.0 0.0 7.2668 7.2668 79.719 0.0 0.0 0.0 23.010299956639813 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.0 1.6989700043360187 0.0 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}{I|L}R{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}R 7.2668;6.9927 -;- 32 + 1 1.243 75089.0 1.0 7958 4779 12737 HBL1_DMSO_200M_050219_2,12739 HBL1_DMSO_200M_050219_2,12739, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12740 67.988 31.0 1693200.0 25 0 121350.0 + 34245 SLPVEVQEV 9 89 500.2714945098983 998.5284360865966 2 500.2719299197197 MULTI CID FTMS 0 0 0 12737 1552288.625 1.0 0 0.0 3 Unmodified _SLPVEVQEV_ ENSG00000141425|ENST00000399022|RPRD1A;nc|ENSG00000141425|Q96P16-3|RPRD1A 28.486842064014134 0.1687311288560894 4 {NN|[MP]|[D{I|L}]|[EV]}PVQE 6 4 44.456 0.0 0.0 4.4521 0.0 0.0 0.0 314.16775428411535 314.16775428411535 17.302046884880937 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2059771852360797 0.0 {NN|[MP]|[D{I|L}]|[EV]}PVQE 4.4521 - 160 1 1.243 46779.2 1.0 7959 4779 12737 HBL1_DMSO_200M_050219_2,12740 HBL1_DMSO_200M_050219_2,12740,SLPVEVQEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12741 67.99 30.0 2393500.0 25 0 182450.0 + 21915 LPPHIIRL 8 95 479.8140515051801 957.6135500771602 2 479.8160888552666 MULTI CID FTMS 0 0 0 12737 1091199.125 0.4955934971922439 -3 0.2117385864257812 4 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 30.63653989081413 0.3996269429323407 4 {I|L}PPH{I|L}[R{I|L}]{I|L} 8 0 + 62.841 0.0 0.0 6.5623 6.5623 93.262 0.0 0.0 0.0 39.11236583892361 3.0204688488093723 3.0204688488093723 62.841087759491856 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPH{I|L}[R{I|L}]{I|L} 6.5623 + + 173 + 1 1.243 58072.7 1.0 7960 4779 12737 HBL1_DMSO_200M_050219_2,12741 HBL1_DMSO_200M_050219_2,12741,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12742 67.991 54.0 1182900.0 25 0 128790.0 -1 YAFNMKATV 9 100 530.7598438353665 1059.505134737533 2 530.7598144412041 MULTI CID FTMS 0 0 0 12737 904701.3125 0.4800695733730781 3 -0.0936813354492187 5 Oxidation (M) _YAFNM(Oxidation (M))KATV_ ENSG00000109971|ENST00000534624|HSPA8 34.40172386719151 0.1061884637610825 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}N{M(Oxidation (M))|F}[KA]TV 9 -1 + 51.938 0.0 0.0 4.9021 4.9021 81.024 0.0 0.0 0.0 27.147642715192507 10.142404391146108 10.142404391146108 9.208187539523747 0 0.4247425010840047 2.0 0.5629529932484498 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}N{M(Oxidation (M))|F}[KA]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GG{M(Oxidation (M))|F}[KA]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}N{M(Oxidation (M))|F}[KA]S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GG{M(Oxidation (M))|F}[KA]S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{M(Oxidation (M))|F}]{I|L} 4.9021;4.033;3.9449;3.0758;2.1572 +;-;-;-;- + 533 + 1 1.243 54413.2 1.0 7961 4779 12737 HBL1_DMSO_200M_050219_2,12742 HBL1_DMSO_200M_050219_2,12742,YAFNMKATV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12743 67.995 214.0 553400.0 25 0 43832.0 -1 0 96 993.9633454030956 1985.912137872992 2 994.4617187380792 MULTI CID FTMS 0 0 0 12737 687433.0 0.5620811129391317 -3 0.2117385864257812 6 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RSEVVY 8 -1 47.358 0.0 0.0 2.3847 0.0 0.0 0.0 989.404727554885 989.404727554885 21.08349385648225 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8252574989159953 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RSEVVY 2.3847 - 2363 1 1.243 80368.1 1.0 7962 4779 12737 HBL1_DMSO_200M_050219_2,12743 HBL1_DMSO_200M_050219_2,12743, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12744 67.999 217.0 1150100.0 25 0 297120.0 + 27255 PGVVTLSVP 9 150 434.7595561632618 867.5045593933237 2 434.7599365115166 MULTI CID FTMS 0 0 0 12737 649839.625 0.4611647372065059 -3 0.2117385864257812 7 Unmodified _PGVVTLSVP_ REV__ENSG00000135763|ENST00000258243|URB2 2.059750862983233 0.8427793054688888 4 {[SA]|[TG]}Y{I|L} 4 -1 17.374 0.0 0.0 2.0027 0.0 0.0 0.0 430.2655206572487 430.2655206572487 8.041529292945816 0.0 0.0 0.0 0 0.3054621874040891 0.2441251443275086 0.3205823742494345 0.0 {[SA]|[TG]}Y{I|L} 2.0027 - 102 1 1.243 194253.4 1.0 7963 4779 12737 HBL1_DMSO_200M_050219_2,12744 HBL1_DMSO_200M_050219_2,12744,PGVVTLSVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12745 68.001 71.0 1187600.0 25 0 78298.0 + 25248 MVPEDVPRL 9 98 528.2802041516114 1054.5458553700228 2 528.2795287966728 MULTI CID FTMS 0 0 0 12737 723191.8125 0.3618590229920931 -17 1.5250625610351562 8 Unmodified _MVPEDVPRL_ ENSG00000272333|ENST00000420124|KMT2B 29.081581746732265 0.1611639662936252 4 {[ET]|[MV]}PEDV[RP]{I|L} 9 0 + 30.467 0.0 0.0 2.8891 2.8891 63.943 0.0 0.0 0.0 3.5560664011851664 8.071516336144885 3.5560664011851664 1.647291836125575 0 0.0 0.0 0.0 0.3054621874040891 + + {[ET]|[MV]}PEDV[RP]{I|L};{[VA]|[{I|L}G]}D{I|L}RRN[DP];{[VA]|[{I|L}G]}{I|L}DRRN[DP];[TP]S{I|L}RRN[DP];[WP]DVG{I|L}[RN]V;{NN|[MP]|[D{I|L}]|[EV]}G{I|L}RRN[DP];{[VA]|[{I|L}G]}D{I|L}[PA]{I|L}E{NN|[MP]|[D{I|L}]|[EV]};{[VA]|[{I|L}G]}D{I|L}RRGG[DP];{[VA]|[{I|L}G]}{I|L}D[PA]{I|L}E{NN|[MP]|[D{I|L}]|[EV]};{[VA]|[{I|L}G]}{I|L}DRRGG[DP] 2.8891;2.7329;2.4475;2.0701;2.0551;1.9516;1.9082;1.8597;1.6228;1.5743 +;-;-;-;-;-;-;-;-;- + 478 + 1 1.243 76524.1 1.0 7964 4779 12737 HBL1_DMSO_200M_050219_2,12745 HBL1_DMSO_200M_050219_2,12745,MVPEDVPRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12746 68.005 203.0 580600.0 25 0 23291.0 + 25016 MPQIETRVI 9 143 543.802475914173 1085.590398895146 2 543.8027221560478 MULTI CID FTMS 0 0 0 12737 537121.375 0.2533847465480886 3 -0.0936813354492187 9 Unmodified _MPQIETRVI_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 35.61225514009592 0.0995432151795903 4 MPQ{I|L}ER{I|L}S{I|L} 9 3 + 80.641 0.0 0.0 7.4284 7.4284 80.554 0.0 0.0 0.0 27.447274948966943 1.9188552623891293 1.9188552623891293 1.9188552623891293 0 0.5994850021680094 1.0969100130080565 1.2134679910804405 0.805462187404089 MPQ{I|L}ER{I|L}S{I|L};MPQ{I|L}ER{I|L}TV;MPQ{I|L}ERTV{I|L};MPQ{I|L}ERT{I|L}V;MP[AG]{I|L}ER{I|L}S{I|L};MP[AG]{I|L}ER{I|L}TV;MP[AG]{I|L}ERTV{I|L};MP[AG]{I|L}ERT{I|L}V;MP[VP]{[CA]|SS}R{I|L}S{I|L};MP[VP]{[CA]|SS}R{I|L}TV 7.4284;7.2516;6.8048;6.6281;6.5801;6.4034;5.9566;5.7798;4.2994;4.1227 -;-;-;-;-;-;-;-;-;- 942 + 1 1.243 96304.0 1.0 7965 4779 12737 HBL1_DMSO_200M_050219_2,12746 HBL1_DMSO_200M_050219_2,12746,MPQIETRVI True True MPQIETRVI 68.00465 543.802722156048 88893384.0 12737.0 ENSG00000114346|ENST00000392692|ECT2;;nc|ENSG00000114346|Q9H8V3-3|ECT2;;nc|ENSG00000114346|Q9H8V3-4|ECT2;;nc|ENSG00000114346|Q9H8V3-2|ECT2 5.662559191385905 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12747 68.009 218.0 341540.0 25 0 27553.0 4047 DALSSEGCLW 10 127 540.7360127413141 1079.457472549428 2 541.2361328005791 MULTI CID FTMS 0 0 0 12737 483941.34375 1.0 0 0.0 10 Unmodified _DALSSEGCLW_ ENSG00000124225|ENST00000341744|PMEPA1;nc|ENSG00000124225|Q969W9-2|PMEPA1;nc|ENSG00000124225|Q969W9-3|PMEPA1 10.073929032068715 0.6785112666868882 4 {[DA]|[EG]}E{I|L}{I|L}D{[QG]|[NA]}[YG] 10 7 + 19.505 0.0 0.0 1.807 1.807 69.804 0.0 0.0 0.0 6.194541705953279 1.249387366082999 1.249387366082999 6.194541705953279 0 0.0 0.9208187539523752 0.2215141619232908 0.0 {[DA]|[EG]}E{I|L}{I|L}D{[QG]|[NA]}[YG];{[QN]|[E{I|L}]|[KN]}DA{I|L}D{[QG]|[NA]}[YG];[HT]{[QG]|[NA]}D{I|L}S[WH];{NN|[MP]|[D{I|L}]|[EV]}EA{I|L}D{[QG]|[NA]}[YG];{[DA]|[EG]}E[KP][WD][YG];{[QV]|[N{I|L}]|[RA]|[KV]}[WQ]D{[QG]|[NA]}[YG];[HT]{[QG]|[NA]}D[WH]TV;[HT]{[QG]|[NA]}D[WH]S{I|L} 1.807;1.2331;0.86446;0.21694;0.18567;0.1478;0.1012;0.011426 -;-;-;-;-;-;-;- 529 1 1.243 65881.6 1.0 7966 4779 12737 HBL1_DMSO_200M_050219_2,12747 HBL1_DMSO_200M_050219_2,12747,DALSSEGCLW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12748 68.013 243.0 590640.0 25 0 76000.0 + 25041 MPTLPPPSV 9 137 469.7542392154372 937.4939254976744 2 469.7544738650322 MULTI CID FTMS 0 0 0 12737 400475.71875 0.3482443356048487 -11 1.0287933349609375 11 Unmodified _MPTLPPPSV_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 104.79918948944588 0.0084531067040494 4 {[TV]|[{I|L}S]}TPA 5 7 49.125 0.0 0.0 5.24 0.0 0.0 0.0 465.2207070740994 465.2207070740994 12.345828311578437 0.0 0.0 0.0 0 1.0 2.0 0.9291746928241128 0.0 {[TV]|[{I|L}S]}TPA 5.24 - 963 1 1.243 112616.2 1.0 7967 4779 12737 HBL1_DMSO_200M_050219_2,12748 HBL1_DMSO_200M_050219_2,12748,MPTLPPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12749 68.018 232.0 975860.0 25 0 84254.0 + 36729 TDQIQSLPL 9 179 507.7768031235198 1013.5390533138396 2 508.2784606814384 MULTI CID FTMS 0 0 0 12737 373161.46875 0.3720757980806753 -2 0.1764144897460937 12 Unmodified _TDQIQSLPL_ ENST00000540847.6_1_18:13073121-13088876:+|nuORF 32.30548876998284 0.1201446275138228 4 GGT{I|L}ENT 7 8 34.524 0.0 0.0 3.4063 0.0 0.0 0.0 338.20570589569087 338.20570589569087 17.586012338783902 0.0 0.0 0.0 0 1.064909327626439 0.8860566476931632 0.7803695511246984 0.0 GGT{I|L}ENT 3.4063 - 3655 1 1.243 177972.2 1.0 7968 4779 12737 HBL1_DMSO_200M_050219_2,12749 HBL1_DMSO_200M_050219_2,12749,TDQIQSLPL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12750 68.022 258.0 209950.0 25 0 34049.0 -1 0 48 1010.75247018031 0 1010.75157469511 PEAK CID FTMS 0 0 0 12737 291114.0 1.0 0 0.0 13 4 ET{M(Oxidation (M))|F}V 4 -1 18.928 0.0 0.0 0.93726 0.0 0.0 1117.078779616676 423.1636141412719 1540.242393757948 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ET{M(Oxidation (M))|F}V 0.93726 - 40 + 1 1.243 55016.7 1.0 7969 4779 12737 HBL1_DMSO_200M_050219_2,12750 HBL1_DMSO_200M_050219_2,12750, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12751 68.027 234.0 308970.0 25 0 45099.0 + 17877 KQLSDTSIIAV 11 108 587.8372431826483 1173.6599334320963 2 587.8381225466728 MULTI CID FTMS 0 0 0 12737 358762.4375 0.6396652950370603 -3 0.2117385864257812 14 Unmodified _KQLSDTSIIAV_ ENSG00000145743|ENST00000542267|FBXL17;nc|ENSG00000145743|Q9UF56-2|FBXL17;nc|ENSG00000145743|Q9UF56-3|FBXL17 28.49450938151212 0.4231428536161201 4 V{I|L}[DG][WR]GAV 9 7 38.35 0.0 0.0 3.2676 0.0 0.0 202.1319024671413 0.0 202.1319024671413 0.0 15.976277995878547 0.0 0.0 0 1.424742501084005 0.0 0.8494850021680094 0.0 V{I|L}[DG][WR]GAV 3.2676 - 469 + 1 1.243 59528.7 1.0 7970 4779 12737 HBL1_DMSO_200M_050219_2,12751 HBL1_DMSO_200M_050219_2,12751,KQLSDTSIIAV False True KQLSDTSIIAV 68.026877 587.838122546673 10235989.0 12737.0 ENSG00000145743|ENST00000542267|FBXL17;;nc|ENSG00000145743|Q9UF56-3|FBXL17;;nc|ENSG00000145743|Q9UF56-2|FBXL17 4.674428462982178 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12753 68.031 0.16 146940000.0 25 0 15700000.0 + 37125 TGYLNTVTV 9 53 484.2583831501523 966.5022133671048 2 484.2589294314384 MULTI CID FTMS 0 0 0 12752 253477904.0 0.7212054876987298 -2 0.1105499267578125 1 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 15.847184025352805 0.4077185912009129 4 {I|L}CTV 4 6 30.165 0.0 0.0 3.1211 0.0 0.0 532.2856433981578 0.0 532.2856433981578 0.0 23.17532531436136 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}CTV 3.1211 - 20 + 1 1.179 25751.2 1.0 7971 4780 12752 HBL1_DMSO_200M_050219_2,12753 HBL1_DMSO_200M_050219_2,12753,TGYLNTVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12754 68.032 6.6 6072000.0 25 0 1098500.0 + 43604 YAFNMKATV 9 63 522.7624437942544 1043.5103346553087 2 522.7630493044853 MULTI CID FTMS 0 0 0 12752 7450901.0 0.1246019657638548 4 -0.0973434448242187 2 Unmodified _YAFNMKATV_ ENSG00000109971|ENST00000534624|HSPA8 27.628801355627647 0.1796483985696185 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM[KA]TV 9 0 + 52.241 0.0 0.0 5.0063 5.0063 81.487 0.0 0.0 0.0 14.189615513722195 11.795606106491904 11.795606106491904 9.208187539523747 0 0.4247425010840047 2.0 0.6109243748081782 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM[KA]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GGM[KA]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HV]E[EP]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K]{[VA]|[{I|L}G]}AYV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NA{M(Oxidation (M))|F}TAYV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K]{[VA]|[{I|L}G]}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NA{M(Oxidation (M))|F}TV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[TV]|[{I|L}S]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}TV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K][Q{I|L}]YV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NAT{M(Oxidation (M))|F}AYV 5.0063;4.1238;3.2094;2.737;2.732;2.3586;2.3536;2.1672;2.1161;2.0622 +;-;-;-;-;-;-;-;-;- + 351 + 1 1.179 36318.1 1.0 7972 4780 12752 HBL1_DMSO_200M_050219_2,12754 HBL1_DMSO_200M_050219_2,12754,YAFNMKATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12755 68.033 6.1 8235100.0 25 0 1177800.0 21075 LPAGGILVF 9 75 443.773538906193 885.532524879186 2 443.7736694216728 MULTI CID FTMS 0 0 0 12752 9669512.0 0.5642802496030289 4 -0.0973434448242187 3 Unmodified _LPAGGILVF_ ENSG00000150990|ENST00000308736|DHX37 20.871210003555333 0.2717241269066626 4 {I|L}P 2 7 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3741636537399 672.3741636537399 23.081597033474424 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 89 + 1 1.179 46282.5 1.0 7973 4780 12752 HBL1_DMSO_200M_050219_2,12755 HBL1_DMSO_200M_050219_2,12755,LPAGGILVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12756 68.034 38.0 2080900.0 25 0 171500.0 -1 0 81 653.3286866698638 1956.9642306097912 3 653.6624633669853 MULTI CID FTMS 0 0 0 12752 3032902.75 0.5706941598408855 -2 0.1105499267578125 4 4 VTN{I|L}C{[TV]|[{I|L}S]} 7 -1 44.535 0.0 0.0 2.2757 0.0 0.0 1208.5855207482662 0.0 1208.5855207482662 0.0 27.16190326687972 0.0 0.0 0 0.0 0.0 1.5629529932484498 1.0356668758921828 VTN{I|L}C{[TV]|[{I|L}S]} 2.2757 - 1341 + 1 1.179 63709.9 1.0 7974 4780 12752 HBL1_DMSO_200M_050219_2,12756 HBL1_DMSO_200M_050219_2,12756, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12757 68.036 63.0 1876600.0 25 0 157190.0 + 27729 PLLSLARPL 9 100 490.3184029240292 978.6222529148584 2 490.3183471560478 MULTI CID FTMS 0 0 0 12752 1473186.875 0.4975876141733008 -6 0.4742660522460937 5 Unmodified _PLLSLARPL_ ENST00000291232.4_2_22:42318980-42319160:-|nuORF 48.345845343767074 0.0439967357579942 4 {I|L}P{I|L}VT 5 7 72.321 0.0 0.0 7.39 0.0 0.0 0.0 452.2640121042831 452.2640121042831 50.04788880159006 0.0 0.0 0.0 0 1.110924374808178 2.0 0.3252574989159953 0.0 {I|L}P{I|L}VT 7.39 - 270 + 1 1.179 92633.9 1.0 7975 4780 12752 HBL1_DMSO_200M_050219_2,12757 HBL1_DMSO_200M_050219_2,12757,PLLSLARPL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12758 68.039 148.0 880130.0 25 0 79901.0 23566 LTMEMNRF 8 157 521.2484749194414 1040.482396905683 2 521.2488891482353 MULTI CID FTMS 0 0 0 12752 1093736.25 0.8794553138111901 1 -0.0296173095703125 6 Unmodified _LTMEMNRF_ ENSG00000104356|ENST00000401707|POP1 19.438996006549623 0.6237395211498085 4 [{I|L}T]{[WS]|[C(Carbamidomethyl (C)){I|L}]}P{M(Oxidation (M))|F}E 7 6 28.587 0.0 0.0 2.7475 0.0 0.0 0.0 177.0675448053344 177.0675448053344 10.24900060245456 0.0 0.0 0.0 0 0.0 2.0 0.6747425010840047 0.0 [{I|L}T]{[WS]|[C(Carbamidomethyl (C)){I|L}]}P{M(Oxidation (M))|F}E 2.7475 - 1729 + 1 1.179 104461.9 1.0 7976 4780 12752 HBL1_DMSO_200M_050219_2,12758 HBL1_DMSO_200M_050219_2,12758,LTMEMNRF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12759 68.041 74.0 798290.0 25 0 109970.0 + 20367 LLGNSILV 8 91 414.76351964514186 827.5124863570837 2 414.7635681033134 MULTI CID FTMS 0 0 0 12752 808424.3125 0.9865824128576476 1 -0.0296173095703125 7 Unmodified _LLGNSILV_ ENSG00000099958|ENST00000318109|DERL3;ENST00000464034.5_1_22:24179058-24179882:-|nuORF;ENST00000464110.1_1_22:24179249-24180975:-|nuORF;nc|ENSG00000099958|Q96Q80-2|DERL3;nc|ENSG00000099958|Q96Q80-3|DERL3;nc|ENSG00000099958|Q96Q80-5|DERL3 24.67388899826682 0.525179942228231 4 {[DA]|[EG]}[KG]{I|L}{I|L}{I|L}V 8 4 + 44.314 0.0 0.0 5.3551 5.3551 84.73 0.0 0.0 0.0 11.529674602085436 10.172203223519531 10.172203223519531 11.529674602085436 0 0.8182503180159344 1.6989700043360187 0.4247425010840047 0.0 {[DA]|[EG]}[KG]{I|L}{I|L}{I|L}V;[KG]{I|L}AD{I|L}{I|L}V;{[SA]|[TG]}{[NV]|[RG]}{I|L}{I|L}{I|L}V;[KG]{[DA]|[EG]}{I|L}{I|L}{I|L}V;{I|L}{I|L}KG{[DA]|[EG]}{I|L}V;[KG]{I|L}{I|L}{[DA]|[EG]}{I|L}V 5.3551;3.9618;3.7327;3.151;2.3993;1.6974 -;-;-;-;-;- 180 1 1.179 52613.7 1.0 7977 4780 12752 HBL1_DMSO_200M_050219_2,12759 HBL1_DMSO_200M_050219_2,12759,LLGNSILV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12760 68.044 187.0 572740.0 25 0 62589.0 + 17861 KQLEEAIQL 9 148 536.3056882786437 1070.5968236240874 2 536.3051635622978 MULTI CID FTMS 0 0 0 12752 584229.1875 0.3056873609470288 -10 0.861663818359375 8 Unmodified _KQLEEAIQL_ ENSG00000119397|ENST00000373855|CNTRL;ENST00000373851.6_1_9:123874787-123912836:+|nuORF;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 47.74868867922204 0.0453060283459952 4 [AG]{I|L}KEEA{I|L}[Q{I|L}] 10 3 + 51.974 0.0 0.0 4.8547 4.8547 76.876 0.0 0.0 0.0 5.9055448578779846 7.269987279362624 5.9055448578779846 5.9055448578779846 0 0.3252574989159953 1.6989700043360187 1.110924374808178 0.4247425010840047 [AG]{I|L}KEEA{I|L}[Q{I|L}];[Q{I|L}]KEEA{I|L}[Q{I|L}];{[VA]|[{I|L}G]}AKEEA{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}[KQ]EA{I|L}[Q{I|L}];[{I|L}A]GKEEA{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}EA[KG]A{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}E[KQ]A{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}[NG][{I|L}T]A{I|L}[Q{I|L}];[AG]{I|L}[DG][{I|L}T]A{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}H[YR]{I|L}[Q{I|L}] 4.8547;4.3031;4.2537;4.0026;3.8416;3.5677;3.4032;3.27;3.1027;2.7566 -;-;-;-;-;-;-;-;-;- 1001 1 1.179 86375.8 1.0 7978 4780 12752 HBL1_DMSO_200M_050219_2,12760 HBL1_DMSO_200M_050219_2,12760,KQLEEAIQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12761 68.048 203.0 297370.0 25 0 13631.0 + -1 FRYILNCMA 9 128 573.7758536951478 1145.5371544570955 2 573.7758666872978 MULTI CID FTMS 0 0 0 12752 425518.21875 0.6139477676180947 -8 0.6749725341796875 9 Oxidation (M) _FRYILNCM(Oxidation (M))A_ ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-5|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6 20.453626601364224 0.2830276176381075 4 [HV]{M(Oxidation (M))|F}VP{I|L}NC{[MS]|[{M(Oxidation (M))|F}A]} 10 -1 + 47.457 0.0 0.0 4.1428 4.1428 67.751 0.0 0.0 0.0 3.5698140099313136 4.884381005764311 3.5698140099313136 1.7609125905568137 0 0.7614393726401688 1.0 0.0 0.0 [HV]{M(Oxidation (M))|F}VP{I|L}NC{[MS]|[{M(Oxidation (M))|F}A]};[HV]{M(Oxidation (M))|F}P{I|L}VNC{[MS]|[{M(Oxidation (M))|F}A]};[HV]P{I|L}{M(Oxidation (M))|F}VNC{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}P]HV{M(Oxidation (M))|F}VNC{[MS]|[{M(Oxidation (M))|F}A]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{M(Oxidation (M))|F}VNC{[MS]|[{M(Oxidation (M))|F}A]};[HV]P{M(Oxidation (M))|F}{I|L}VNC{[MS]|[{M(Oxidation (M))|F}A]};[HV]{M(Oxidation (M))|F}PV{I|L}NC{[MS]|[{M(Oxidation (M))|F}A]};[HV]P{M(Oxidation (M))|F}V{I|L}NC{[MS]|[{M(Oxidation (M))|F}A]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}{M(Oxidation (M))|F}VNC{[MS]|[{M(Oxidation (M))|F}A]};[HV]{M(Oxidation (M))|F}VP{I|L}GGC{[MS]|[{M(Oxidation (M))|F}A]} 4.1428;3.9891;3.9307;3.8312;3.7954;3.7769;3.7263;3.5141;3.4742;3.3428 -;-;-;-;-;-;-;-;-;- 612 1 1.179 56153.8 1.0 7979 4780 12752 HBL1_DMSO_200M_050219_2,12761 HBL1_DMSO_200M_050219_2,12761,FRYILNCMA False False FRYILNCMA 68.04815 573.775866687298 10280323.0 12752.0 ENSG00000186976|ENST00000262726|EFCAB6;;nc|ENSG00000186976|Q5THR3-5|EFCAB6;;nc|ENSG00000186976|Q5THR3-2|EFCAB6 4.163432677586873 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12762 68.052 223.0 237090.0 25 0 11316.0 -1 0 88 662.9790161624647 1985.915219087594 3 663.3134033083916 MULTI CID FTMS 0 0 0 12752 386765.875 0.530583205158621 -2 0.1105499267578125 10 4 C{[TV]|[{I|L}S]} 3 -1 10.502 0.0 0.0 0.52882 0.0 0.0 1664.7819315893505 0.0 1664.7819315893505 0.0 5.564834191127091 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 C{[TV]|[{I|L}S]} 0.52882 - 207 + 1 1.179 50482.1 1.0 7980 4780 12752 HBL1_DMSO_200M_050219_2,12762 HBL1_DMSO_200M_050219_2,12762, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12763 68.056 217.0 467590.0 25 0 33590.0 + 12107 GQIELRTYV 9 122 539.7985728331763 1077.5825927331523 2 540.3013793826103 MULTI CID FTMS 0 0 0 12752 296539.90625 0.6335881522140252 -2 0.1105499267578125 11 Unmodified _GQIELRTYV_ ENSG00000167136|ENST00000372642|ENDOG 36.506200033944 0.094635877243972 4 [{I|L}T]P[EP]{I|L}E{I|L} 8 8 39.324 0.0 0.0 3.6493 0.0 0.0 0.0 182.05412156202053 182.05412156202053 25.829301064512407 0.0 0.0 0.0 0 1.305462187404089 0.721246399047171 0.6203715150305281 0.0 [{I|L}T]P[EP]{I|L}E{I|L} 3.6493 - 534 1 1.179 84251.4 1.0 7981 4780 12752 HBL1_DMSO_200M_050219_2,12763 HBL1_DMSO_200M_050219_2,12763,GQIELRTYV True True GQIELRTYV 68.056488 540.30137938261 5562751.0 12752.0 ENSG00000167136|ENST00000372642|ENDOG 2.466458559036255 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12765 68.061 7.8 3397600.0 25 0 184770.0 + 15590 IPYPLSENNQV 11 57 637.3246690404161 1272.634785147632 2 637.3253051638603 MULTI CID FTMS 0 0 0 12764 6616425.0 0.7855574285617267 -5 0.28857421875 1 Unmodified _IPYPLSENNQV_ ENSG00000104549|ENST00000265896|SQLE 41.8396318013385 0.1840573104808743 4 [{I|L}P]YP{I|L}SEN 8 3 62.384 0.0 0.0 4.9019 0.0 0.0 0.0 356.1559196763986 356.1559196763986 42.17202806162927 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 + [{I|L}P]YP{I|L}SEN 4.9019 + + 135 1 1.179 27195.1 1.0 7982 4781 12764 HBL1_DMSO_200M_050219_2,12765 HBL1_DMSO_200M_050219_2,12765,IPYPLSENNQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12766 68.062 15.0 5590800.0 25 0 727260.0 + 21919 LPPHIIRL 8 70 320.2117583217455 957.6134455654365 3 320.2114135622978 MULTI CID FTMS 0 0 0 12764 4036629.0 0.5328175558467086 11 -0.4326629638671875 2 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 29.081581746732265 0.4323690340403521 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 0 + 67.626 0.0 0.0 7.0619 7.0619 81.61 0.0 0.0 0.0 56.656687756324686 5.484550065040281 5.484550065040281 3.0102999566398125 0 0.25 1.6989700043360187 0.0 0.0 + + {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 7.0619;6.7476;6.4332;4.0836 +;-;-;- + 82 + 1 1.179 70668.3 1.0 7983 4781 12764 HBL1_DMSO_200M_050219_2,12766 HBL1_DMSO_200M_050219_2,12766,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12767 68.063 23.0 2531300.0 25 0 569470.0 + 39208 TYSEFAREL 9 73 558.2716975375329 1114.5288421418657 2 558.2720825076103 MULTI CID FTMS 0 0 0 12764 2010298.375 0.5523233598585493 4 -0.0870895385742187 3 Unmodified _TYSEFAREL_ nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1 27.22323531849824 0.1848086127304535 4 TYSE{M(Oxidation (M))|F}A{[RE]|[WV]}{I|L} 9 0 + 76.859 0.0 0.0 6.8961 6.8961 93.511 0.0 0.0 0.0 58.95242492728684 4.9595372608497 4.9595372608497 29.75772496747986 0 0.7742275032520141 2.0 0.0 0.3252574989159953 + + TYSE{M(Oxidation (M))|F}A{[RE]|[WV]}{I|L};TY{I|L}{M(Oxidation (M))|F}[VG]A[EC]{I|L};TYS[K{I|L}]EE[{M(Oxidation (M))|F}V];TY{I|L}[KS][NG]S[{M(Oxidation (M))|F}V];TYS[K{I|L}][NG]S[{M(Oxidation (M))|F}V];TY{I|L}[KS]EE[{M(Oxidation (M))|F}V];TY{I|L}[KS][NG]D{[MS]|[{M(Oxidation (M))|F}A]};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}AR{M(Oxidation (M))|F}{I|L}[{M(Oxidation (M))|F}V];TYS[K{I|L}][NG]D{[MS]|[{M(Oxidation (M))|F}A]};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}A[VG]{M(Oxidation (M))|F}{I|L}[{M(Oxidation (M))|F}V] 6.8961;4.2261;3.7556;3.6665;3.4879;3.1719;2.5232;2.4269;2.3446;1.6007 +;-;-;-;-;-;-;-;-;- + 186 + 1 1.179 52019.9 1.0 7984 4781 12764 HBL1_DMSO_200M_050219_2,12767 HBL1_DMSO_200M_050219_2,12767,TYSEFAREL False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12768 68.064 22.0 1516700.0 25 0 131660.0 + 18427 KWNASSMVL 9 69 518.2678127479699 1034.5210725627396 2 518.2681152224541 MULTI CID FTMS 0 0 0 12764 1905180.875 0.2154096651981004 5 -0.1025390625 4 Unmodified _KWNASSMVL_ REV__ENST00000430295.5_1_10:29747230-29747296:+|nuORF 10.823927491677226 0.5436922275383211 4 TV{I|L} 3 -1 18.64 0.0 0.0 1.8018 0.0 0.0 703.3129749982437 0.0 703.3129749982437 0.0 1.650378042405908 0.0 0.0 0 0.3935078169319297 0.0 0.4247425010840047 0.0 TV{I|L} 1.8018 - 39 1 1.179 29942.0 1.0 7985 4781 12764 HBL1_DMSO_200M_050219_2,12768 HBL1_DMSO_200M_050219_2,12768,KWNASSMVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12769 68.069 259.0 425270.0 25 0 13354.0 + -1 SVYGSLASV 9 115 881.9100047347756 1761.8054565363511 2 882.4128906130791 MULTI CID FTMS 0 0 0 12764 366254.65625 1.0 0 0.0 5 ENST00000514610.1_1_5:43294791-43295951:-|nuORF;ENSG00000112972|ENST00000325110|HMGCS1;ENST00000508319.1_1_5:43294149-43294911:-|nuORF 4 [VS]AA{M(Oxidation (M))|F}{I|L}AS[C(Carbamidomethyl (C))R]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 62.088 0.0 0.0 3.5241 3.5241 66.558 0.0 0.0 0.0 2.1466206279465183 2.1466206279465183 2.1466206279465183 2.1466206279465183 0 0.2614393726401688 0.8239087409443188 2.1976212463643425 0.0 [VS]AA{M(Oxidation (M))|F}{I|L}AS[C(Carbamidomethyl (C))R]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}N[QA]VSA{I|L}S{M(Oxidation (M))|F}{I|L}Q;[VS]CVS{I|L}AS[C(Carbamidomethyl (C))R]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[VS]AA{M(Oxidation (M))|F}{I|L}AHHEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}{I|L}AS[C(Carbamidomethyl (C))R]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[VS]AAYPAS[C(Carbamidomethyl (C))R]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[VS]AA{M(Oxidation (M))|F}{I|L}AS[C(Carbamidomethyl (C))R]N{I|L}[DV][HC];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NEQQA{I|L}S{M(Oxidation (M))|F}{I|L}Q;[VS]AMS{I|L}AS[C(Carbamidomethyl (C))R]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[VS]CVS{I|L}AHHEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.5241;3.4023;3.3236;3.308;3.3079;3.3043;3.2533;3.2503;3.2226;3.1075 -;-;-;-;-;-;-;-;-;- 15131 1 1.179 77854.1 1.0 7986 4781 12764 HBL1_DMSO_200M_050219_2,12769 HBL1_DMSO_200M_050219_2,12769, False False SVYGSLASV 68.068891 882.412890613079 9857274.0 12764.0 ENST00000514610.1_1_5:43294791-43295951:-|nuORF;;ENSG00000112972|ENST00000325110|HMGCS1;;ENST00000508319.1_1_5:43294149-43294911:-|nuORF 6.128164609273274 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12770 68.073 237.0 575430.0 25 0 32823.0 + 29599 QLVEQVEQI 9 176 543.2963216863845 1084.578090439569 2 543.2960693240166 MULTI CID FTMS 0 0 0 12764 404286.21875 0.4490001202224087 -6 0.4582290649414062 6 Unmodified _QLVEQVEQI_ ENSG00000184840|ENST00000332598|TMED9;ENST00000507723.1_1_5:177021070-177022414:+|nuORF;ENST00000513799.5_1_5:177019550-177022414:+|nuORF 61.357469665136826 0.0253304979873734 4 [Q{I|L}]D{I|L}QV 6 5 51.212 0.0 0.0 4.7218 0.0 0.0 0.0 385.174500922244 385.174500922244 19.002800155198727 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.9436726795685342 1.1307196863200843 [Q{I|L}]D{I|L}QV 4.7218 - 1963 1 1.179 108667.6 1.0 7987 4781 12764 HBL1_DMSO_200M_050219_2,12770 HBL1_DMSO_200M_050219_2,12770,QLVEQVEQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12772 68.077 12.0 5646400.0 25 0 607080.0 + 39699 VEGFYYVE 8 73 503.23217100274496 1004.44978907229 2 503.2320434451103 MULTI CID FTMS 0 0 0 12771 8929576.0 0.4549569222460552 -7 0.4750747680664062 1 Unmodified _VEGFYYVE_ REV__ENSG00000162975|ENST00000295082|KCNF1 5.230669730166228 0.792582437072536 4 V{M(Oxidation (M))|F}[HV]E 5 -1 22.135 0.0 0.0 2.2037 0.0 0.0 0.0 390.1397188776001 390.1397188776001 17.53083433768431 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 V{M(Oxidation (M))|F}[HV]E 2.2037 - 22 + 1 1.179 59735.2 1.0 7988 4782 12771 HBL1_DMSO_200M_050219_2,12772 HBL1_DMSO_200M_050219_2,12772,VEGFYYVE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12773 68.079 24.0 2189000.0 25 0 172550.0 -1 VMPRQMGV 8 103 331.16100712044613 990.4611919615384 3 331.1605407595634 MULTI CID FTMS 0 0 0 12771 3406904.75 1.0 0 0.0 2 Acetyl (Protein N-term),2 Oxidation (M) _(Acetyl (Protein N-term))VM(Oxidation (M))PRQM(Oxidation (M))GV_ ENST00000461208.5_1_3:47545925-47552697:-|nuORF;ENST00000483205.1_1_3:47551669-47552697:-|nuORF 7.289230182591677 0.7800870086367542 4 TVN 3 -1 18.94 0.0 0.0 1.9123 0.0 0.0 134.0565309408475 539.2221773736936 673.2787083145411 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 TVN 1.9123 - 336 + 1 1.179 51269.6 1.0 7989 4782 12771 HBL1_DMSO_200M_050219_2,12773 HBL1_DMSO_200M_050219_2,12773,VMPRQMGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12774 68.08 26.0 3351400.0 25 0 401410.0 23248 LSTYDPFY 8 81 335.82397606874986 1004.4500988064495 3 335.8235351443291 MULTI CID FTMS 0 0 0 12771 3553069.0 0.3603158670574863 -7 0.4750747680664062 3 Unmodified _LSTYDPFY_ ENSG00000128908|ENST00000648947|INO80 9.347437153973935 0.7675937258251505 4 TVT 3 7 30.005 0.0 0.0 2.9872 0.0 0.0 0.0 700.2653959645747 700.2653959645747 16.773174902439578 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TVT 2.9872 - 57 + 1 1.179 72192.2 1.0 7990 4782 12771 HBL1_DMSO_200M_050219_2,12774 HBL1_DMSO_200M_050219_2,12774,LSTYDPFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12775 68.082 93.0 729620.0 25 0 86658.0 + 30191 QVVGGIYGV 9 91 446.2503546492392 0 446.2503234744072 PEAK CID FTMS 0 0 0 12771 2796932.75 1.0 0 0.0 4 Unmodified _QVVGGIYGV_ ENSG00000167658|ENST00000309311|EEF2 36.04419817259434 0.0811646137502998 4 S 1 9 6.9897 0.0 0.0 0.78493 0.0 0.0 444.423761201019 355.99772936388894 800.4214905649079 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.78493 - 54 + 1 1.179 57365.2 1.0 7991 4782 12771 HBL1_DMSO_200M_050219_2,12775 HBL1_DMSO_200M_050219_2,12775,QVVGGIYGV True True QVVGGIYGV 68.081758 446.250323474407 10632533.0 12771.0 ENSG00000167658|ENST00000309311|EEF2 4.057191848754883 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12776 68.083 32.0 1619800.0 25 0 132980.0 8016 EMRALNLYGV 10 89 583.3048244501163 1164.5950959670324 2 583.3049194216728 MULTI CID FTMS 0 0 0 12771 2575425.5 0.8833118343887308 1 -0.0267105102539062 5 Unmodified _EMRALNLYGV_ ENST00000341119.9_1_7:87479196-87479262:-|nuORF 13.042465956692816 0.6287021003332052 4 [TP]TST{I|L}M{I|L} 8 9 39.14 0.0 0.0 3.3608 0.0 0.0 0.0 317.1321155829557 317.1321155829557 15.106442888633254 0.0 0.0 0.0 0 0.3054621874040891 0.0 2.305462187404089 0.0 [TP]TST{I|L}M{I|L} 3.3608 - 241 1 1.179 45907.4 1.0 7992 4782 12771 HBL1_DMSO_200M_050219_2,12776 HBL1_DMSO_200M_050219_2,12776,EMRALNLYGV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12777 68.086 172.0 807500.0 25 0 79379.0 34279 SLQSQTEDTV 10 136 554.2618487379431 1106.509144542686 2 554.2605468630791 MULTI CID FTMS 0 0 0 12771 964487.8125 0.0350231548828087 6 -0.1583633422851562 6 Unmodified _SLQSQTEDTV_ ENST00000497953.5_3_3:52738772-52739516:-|nuORF 26.268140514670165 0.3785003716575977 4 {[QS]|[NT]}{I|L}SQP 6 7 50.425 0.0 0.0 4.5571 0.0 0.0 0.0 463.16646811129857 463.16646811129857 25.41452235345968 0.0 0.0 0.0 0 1.1382104921644451 0.744727494896694 1.1624379954164592 0.535666875892183 {[QS]|[NT]}{I|L}SQP 4.5571 - 1257 1 1.179 108529.1 1.0 7993 4782 12771 HBL1_DMSO_200M_050219_2,12777 HBL1_DMSO_200M_050219_2,12777,SLQSQTEDTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12778 68.091 233.0 272030.0 25 0 26343.0 + 43717 YDAFCFIEPNI 11 111 666.3028717469979 1330.5911905607957 2 666.3060180544853 MULTI CID FTMS 0 0 0 12771 497159.5625 1.0 0 0.0 7 Unmodified _YDAFCFIEPNI_ REV__ENSG00000125107|ENST00000317147|CNOT1;REV__nc|ENSG00000125107|A5YKK6-2|CNOT1;REV__nc|ENSG00000125107|A5YKK6-3|CNOT1;REV__nc|ENSG00000125107|A5YKK6-4|CNOT1 17.11289562659939 0.6791789249425932 4 [WR]QE[DN]C(Carbamidomethyl (C))PN{I|L} 10 -1 + 46.164 0.0 0.0 3.4694 3.4694 66.891 0.0 0.0 0.0 7.269987279362624 2.430380486862944 2.430380486862944 2.430380486862944 0 0.0 0.0 0.3252574989159953 1.1307196863200843 [WR]QE[DN]C(Carbamidomethyl (C))PN{I|L};[WR]QE[DN]C(Carbamidomethyl (C))PQV;[WR]EQ[DN]C(Carbamidomethyl (C))PN{I|L};[WR]EQ[DN]C(Carbamidomethyl (C))PQV;[WR]QE[DN][CG]PN{I|L};[WR][AG]E[DN]C(Carbamidomethyl (C))PN{I|L};[WR][AG]E[DN]C(Carbamidomethyl (C))PQV;[WR]QE[DN][CG]PQV;[WR]E[AG][DN]C(Carbamidomethyl (C))PN{I|L};[WR]EQ[DN][CG]PN{I|L} 3.4694;3.2868;3.2432;3.0605;2.7807;2.7807;2.598;2.598;2.5544;2.5544 -;-;-;-;-;-;-;-;-;- 967 + 1 1.179 53149.9 1.0 7994 4782 12771 HBL1_DMSO_200M_050219_2,12778 HBL1_DMSO_200M_050219_2,12778,YDAFCFIEPNI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12779 68.095 252.0 580710.0 25 0 42427.0 7135 EENETEAVT 9 175 341.1479597789147 1020.4220499369442 3 341.1483337283134 MULTI CID FTMS 0 0 0 12771 455018.9375 0.6947137063695248 -7 0.4750747680664062 8 Unmodified _EENETEAVT_ ENSG00000006453|ENST00000005260|BAIAP2L1 10.150570793230772 0.5619192000662246 4 V 1 8 11.99 0.0 0.0 1.175 0.0 0.0 903.3422216061808 0.0 903.3422216061808 0.0 -11.682437647924218 -11.682437647924218 0.0 0 0.0 0.0 0.0 0.0 + V 1.175 + + 33 + 1 1.179 116052.7 1.0 7995 4782 12771 HBL1_DMSO_200M_050219_2,12779 HBL1_DMSO_200M_050219_2,12779,EENETEAVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12780 68.1 252.0 287640.0 25 0 17628.0 + 32488 SALDTITTV 9 115 460.7506286501884 0 460.7506286501884 PEAK CID FTMS 0 0 0 -1 0 9 Unmodified _SALDTITTV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 39.957323273325 0.0619271662220897 4 PPS 3 9 9.7146 0.0 0.0 1.0565 0.0 0.0 442.22561298652505 193.0993746393188 635.3249876258438 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 PPS 1.0565 - 118 + 1 1.179 62921.3 1.0 7996 4782 12771 HBL1_DMSO_200M_050219_2,12780 HBL1_DMSO_200M_050219_2,12780,SALDTITTV True True SALDTITTV 68.100052 460.750628650188 11489267.0 12771.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 4.212395906448364 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12782 68.106 150.0 1251800.0 25 0 146830.0 -1 0 96 979.4863806345644 1956.9582083359285 2 979.4841796755792 MULTI CID FTMS 0 0 0 12781 1115662.875 0.7164361078282817 1 -0.024169921875 1 4 {[QS]|[NT]}[C(Carbamidomethyl (C))R]TVT{M(Oxidation (M))|F}QTVTN{I|L}C{[TV]|[{I|L}S]} 17 -1 {[QS]|[NT]}[C(Carbamidomethyl (C))R]TVT{M(Oxidation (M))|F}Q + + 51.482 22.176 2.0023 2.6307 2.6307 45.283 0.0 0.0 0.0 0.0 2.9363689693884254 0.0 0.0 0 0.0 0.0 1.555462187404089 1.610924374808178 {[QS]|[NT]}[C(Carbamidomethyl (C))R]TVT{M(Oxidation (M))|F}QTVTN{I|L}C{[TV]|[{I|L}S]} 2.6307 - 3714 + 1 1.119 128309.7 1.0 7997 4783 12781 HBL1_DMSO_200M_050219_2,12782 HBL1_DMSO_200M_050219_2,12782, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12783 68.111 244.0 699540.0 25 0 55168.0 + 33206 SFISFANSR 9 174 514.7612885592955 1027.508024185391 2 514.7620117068291 MULTI CID FTMS 0 0 0 12781 89844.8515625 0.199590386539706 4 -0.1097640991210937 2 Unmodified _SFISFANSR_ ENSG00000105583|ENST00000596731|WDR83OS 28.49450938151212 0.1686335738423394 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}TV 9 3 + 67.862 0.0 0.0 6.6045 6.6045 84.211 0.0 0.0 0.0 6.028259925575057 6.989700043360195 6.028259925575057 6.028259925575057 0 0.7134679910804405 2.0 0.6747425010840047 0.2887254899964357 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}TV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}S{I|L}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S{M(Oxidation (M))|F}A[NS]R;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S{M(Oxidation (M))|F}[MT]PV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S{M(Oxidation (M))|F}[WE]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S{M(Oxidation (M))|F}[SG]QR;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PA]{I|L};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}S{I|L}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S{M(Oxidation (M))|F}[SG]QGV 6.6045;6.0178;5.9242;5.7791;5.5426;5.2822;5.0988;5.0902;5.0293;4.9989 -;-;-;+;-;-;-;-;-;- + 983 + 1 1.119 132650.4 1.0 7998 4783 12781 HBL1_DMSO_200M_050219_2,12783 HBL1_DMSO_200M_050219_2,12783,SFISFANSR False True SFISFANSR 68.110766 514.762011706829 5784393.0 12781.0 ENSG00000105583|ENST00000596731|WDR83OS 6.435896555582683 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12784 68.115 240.0 668730.0 25 0 50781.0 + 26325 NSALVLKV 8 136 422.26841150463895 842.5222700760779 2 422.2680847048759 MULTI CID FTMS 0 0 0 12781 540232.1875 0.3939876253540946 -4 0.120391845703125 3 Unmodified _NSALVLKV_ ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF 103.74828524460852 0.0781359809994014 4 [NS]A{I|L}V{I|L}KV 8 0 + 63.41 0.0 0.0 7.5262 7.5262 86.508 0.0 0.0 0.0 14.704999916446797 5.593080109070115 5.593080109070115 5.593080109070115 0 1.3684151806525389 1.5228787452803376 0.0 0.1923877696554315 + + [NS]A{I|L}V{I|L}KV;[NS]A{I|L}V{I|L}VK;[NS]AV{I|L}{I|L}KV;{[QG]|[NA]}S{I|L}V{I|L}KV;[NS]AV{I|L}{I|L}VK;{[QG]|[NA]}S{I|L}V{I|L}VK;{[QG]|[NA]}SV{I|L}{I|L}KV;{[QG]|[NA]}SV{I|L}{I|L}VK 7.5262;6.8623;6.1606;5.7808;5.4967;5.117;4.4152;3.7514 +;-;-;-;-;-;-;- + 241 + 1 1.119 128286.8 1.0 7999 4783 12781 HBL1_DMSO_200M_050219_2,12784 HBL1_DMSO_200M_050219_2,12784,NSALVLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12785 68.12 231.0 435800.0 25 0 34709.0 + 21824 LPNNRELYI 9 100 566.3112506145966 1130.607948295993 2 566.3121215701103 MULTI CID FTMS 0 0 0 12781 387922.59375 0.1653436402828068 -9 0.5474395751953125 4 Unmodified _LPNNRELYI_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78110025-78110175:-|nuORF 37.77132515983256 0.0876909340306915 4 {I|L}PNN 4 5 46.503 0.0 0.0 4.1131 0.0 0.0 0.0 689.3639010065061 689.3639010065061 11.50682754201746 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.3494850021680094 + {I|L}PNN 4.1131 + + 373 + 1 1.119 84923.9 1.0 8000 4783 12781 HBL1_DMSO_200M_050219_2,12785 HBL1_DMSO_200M_050219_2,12785,LPNNRELYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12786 68.124 247.0 244000.0 25 0 24155.0 + -1 IMLMQCANRIA 11 86 648.3160454897776 1294.617538046355 2 648.3147460818291 MULTI CID FTMS 0 0 0 12781 364675.3125 0.908088561436929 -5 0.1837234497070312 5 2 Oxidation (M) _IM(Oxidation (M))LM(Oxidation (M))QCANRIA_ REV__ENSG00000036257|ENST00000264414|CUL3;REV__nc|ENSG00000036257|Q13618-2|CUL3;REV__nc|ENSG00000036257|Q13618-3|CUL3 22.736283301280096 0.5583477779825423 4 {I|L}PYP{I|L} 5 -1 59.68 0.0 0.0 4.6099 0.0 0.0 0.0 708.2606425396225 708.2606425396225 46.5815315012393 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 {I|L}PYP{I|L} 4.6099 - 642 + 1 1.119 52138.3 1.0 8001 4783 12781 HBL1_DMSO_200M_050219_2,12786 HBL1_DMSO_200M_050219_2,12786,IMLMQCANRIA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12788 68.129 164.0 2489400.0 25 0 378840.0 + 20752 LLSSNLCSL 9 170 475.253045510102 948.491538087004 2 475.2529785037041 MULTI CID FTMS 0 0 0 12787 629382.9375 0.3828706587976522 2 -0.0348129272460937 1 Unmodified _LLSSNLCSL_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 111.28704002717404 0.0050101734347035 4 {[SA]|[TG]}Y{I|L}NTVE 8 8 79.894 0.0 0.0 8.4232 0.0 0.0 0.0 68.05146967105702 68.05146967105702 49.88351285388511 0.0 0.0 0.0 0 2.110924374808178 1.3979400086720375 0.9361818737241736 0.809894379144197 {[SA]|[TG]}Y{I|L}NTVE 8.4232 - 4838 + 1 1.119 303561.0 1.0 8002 4784 12787 HBL1_DMSO_200M_050219_2,12788 HBL1_DMSO_200M_050219_2,12788,LLSSNLCSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12789 68.134 251.0 463560.0 25 0 49132.0 + 16964 KIPTPIVGV 9 129 462.3000546525549 922.5855563719098 2 462.2990905642509 MULTI CID FTMS 0 0 0 12787 468915.4375 0.8034472862165308 -3 0.0677261352539062 2 Unmodified _KIPTPIVGV_ ENSG00000090060|ENST00000216277|PAPOLA 56.17704186161178 0.0281986971544335 4 VAVAVP{I|L}VGV 10 5 + 73.823 0.0 0.0 8.0018 8.0018 95.308 0.0 0.0 0.0 48.29889514636548 13.521825181113629 13.521825181113629 18.75971626005432 0 1.492992819099939 1.154901959985743 0.0 0.0 VAVAVP{I|L}VGV;[{I|L}P]KTP{I|L}VR;VA[R{I|L}]P{I|L}VGV;VAVAVP{I|L}AA{I|L};[VG]{I|L}AVP{I|L}VR;{[VA]|[{I|L}G]}VAVP{I|L}VR;VAVAV[RV]P{I|L};[K{I|L}]PTP{I|L}VR;[TP][K{I|L}]P{I|L}VR;VAVAV[RV]{I|L}P 8.0018;5.9684;5.9139;5.7798;5.7045;5.3305;5.32;5.0821;4.9013;4.7084 -;-;-;-;-;-;-;-;-;- 637 + 1 1.119 90605.6 1.0 8003 4784 12787 HBL1_DMSO_200M_050219_2,12789 HBL1_DMSO_200M_050219_2,12789,KIPTPIVGV True True KIPTPIVGV 68.133874 462.299090564251 3130328.75 12787.0 ENSG00000090060|ENST00000216277|PAPOLA 5.151356379191081 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12790 68.138 243.0 626030.0 25 0 47521.0 + 41414 VPLDKQITI 9 157 513.8132768777444 1025.6120008222888 2 513.8141357302666 MULTI CID FTMS 0 0 0 12787 417928.75 0.037108946645463 -10 0.5716094970703125 3 Unmodified _VPLDKQITI_ ENSG00000163938|ENST00000418458|GNL3;nc|ENSG00000163938|Q9BVP2-2|GNL3 45.739877483867886 0.0497104363764649 4 [VP]EKDVK{I|L}V 9 6 + 44.762 0.0 0.0 4.3644 4.3644 72.029 0.0 0.0 0.0 3.794482255454525 11.385297926661345 3.794482255454525 3.521825181113627 0 0.5960650778452112 1.2218487496163564 0.3252574989159953 0.0 [VP]EKDVK{I|L}V;[VP]EKQ{I|L}T{I|L}V;[VP]EKQT{I|L}{I|L}V;[{I|L}P]DKDVK{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}PKDVK{I|L}V;[VP]EKDV{I|L}KV;[VP]EKVDK{I|L}V;[{I|L}P]DKQ{I|L}T{I|L}V;[{I|L}P]DKQT{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}PKQ{I|L}T{I|L}V 4.3644;4.021;3.9949;3.9944;3.9671;3.7744;3.6829;3.6511;3.6249;3.6237 -;-;-;-;-;-;-;-;-;- 2571 1 1.119 118561.1 1.0 8004 4784 12787 HBL1_DMSO_200M_050219_2,12790 HBL1_DMSO_200M_050219_2,12790,VPLDKQITI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12791 68.144 278.0 279110.0 25 0 20941.0 + + 7761 KTLDVDATYEI 11 106 634.3242755189681 0 634.3260375857353 PEAK CID FTMS 0 0 0 12787 175580.40625 0.6525706955952021 -2 0.0508804321289062 4 Unmodified _ELFLFEDLEL_ nc|ENSG00000105486|P18858-2|LIG1;ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-3|LIG1 30.63653989081413 0.2106260509139429 4 EYTA[PA]VTCV 10 -1 43.955 0.0 0.0 3.4702 0.0 0.0 131.10066440123938 98.02546869449452 229.1261330957339 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 1.610924374808178 0.0 EYTA[PA]VTCV 3.4702 - 761 + 1 1.119 64142.2 1.0 8005 4784 12787 HBL1_DMSO_200M_050219_2,12791 HBL1_DMSO_200M_050219_2,12791,ELFLFEDLEL False False KTLDVDATYEI 68.143574 634.326037585735 3604586.75 12787.0 nc|ENSG00000105486|P18858-2|LIG1;;ENSG00000105486|ENST00000263274|LIG1;;nc|ENSG00000105486|P18858-3|LIG1 3.67959729830424 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12793 68.153 300.0 303020.0 25 0 41069.0 -1 0 83 680.4049229958918 679.3976465292917 1 680.4080688357353 MULTI CID FTMS 0 0 0 12792 188823.125 0.2311197423599754 -1 0.0193634033203125 1 4 [Q{I|L}]SVS 5 -1 16.833 0.0 0.0 2.4777 0.0 0.0 0.0 162.09775574243545 162.09775574243545 -1.927288246655003 0.0 -1.927288246655003 0.0 0 0.0 0.0 0.0 0.2396518287104437 [Q{I|L}]SVS 2.4777 - 142 1 1.119 78019.7 1.0 8006 4785 12792 HBL1_DMSO_200M_050219_2,12793 HBL1_DMSO_200M_050219_2,12793, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12794 68.159 303.0 213590.0 25 0 25217.0 -1 DQCGAYIYTKT 11 66 660.2997927760377 1318.5850326188754 2 660.8025390505791 MULTI CID FTMS 0 0 0 12792 156746.65625 0.3253913488557053 -4 0.0870895385742187 2 Carbamidomethyl (C) _DQC(Carbamidomethyl (C))GAYIYTKT_ ENSG00000147130|ENST00000314425|ZMYM3;ENST00000489332.1_1_X:70467340-70473105:-|nuORF;nc|ENSG00000147130|Q14202-2|ZMYM3;nc|ENSG00000147130|Q14202-3|ZMYM3 2.9952420565917617 0.861016188266951 4 V 1 -1 11.594 0.0 0.0 0.87926 0.0 0.0 1201.5051508823503 0.0 1201.5051508823503 0.0 6.109243748081781 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.87926 - 32 + 1 1.119 53640.6 1.0 8007 4785 12792 HBL1_DMSO_200M_050219_2,12794 HBL1_DMSO_200M_050219_2,12794,DQCGAYIYTKT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12796 68.168 265.0 287780.0 25 0 22822.0 + -1 SYMDPMNEY 9 137 575.2145076658372 574.2072311992372 1 575.2135497927666 MULTI CID FTMS 0 0 0 12795 391572.375 0.8644657450116652 -1 0.0154495239257812 1 nc|ENSG00000078808|Q9BRK5|SDF4;nc|ENSG00000078808|Q9BRK5-2|SDF4;ENSG00000078808|ENST00000360001|SDF4;nc|ENSG00000078808|Q9BRK5-5|SDF4;ENST00000478938.1_1_1:1152894-1154464:-|nuORF;ENST00000465727.5_1_1:1152894-1153089:-|nuORF;ENST00000494748.1_1_1:1152894-1154464:-|nuORF 4 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}Y 4 -1 + 18.429 0.0 0.0 3.2094 3.2094 78.778 0.0 0.0 0.0 3.824543621168388 -3.3759232536510453 -3.3759232536510453 18.428637390930263 0 0.2742275032520141 1.2218487496163564 0.0 0.0 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}Y 3.2094 - 131 1 1.119 61987.7 1.0 8008 4786 12795 HBL1_DMSO_200M_050219_2,12796 HBL1_DMSO_200M_050219_2,12796, False False SYMDPMNEY 68.168347 575.213549792767 3472259.5 12795.0 nc|ENSG00000078808|Q9BRK5|SDF4;;nc|ENSG00000078808|Q9BRK5-2|SDF4;;ENSG00000078808|ENST00000360001|SDF4;;nc|ENSG00000078808|Q9BRK5-5|SDF4;;ENST00000478938.1_1_1:1152894-1154464:-|nuORF;;ENST00000465727.5_1_1:1152894-1153089:-|nuORF;;ENST00000494748.1_1_1:1152894-1154464:-|nuORF 7.336922486623128 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12797 68.174 286.0 155600.0 25 0 15046.0 28362 PSFWIMRCLTV 11 75 676.8482543826103 0 676.8482543826103 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _PSFWIMRCLTV_ ENST00000427025.6_2_6:138893153-138893207:-|nuORF 9.38312468134398 0.4559597037863106 4 TVM 3 10 17.945 0.0 0.0 1.3276 0.0 0.0 792.4129261462768 225.08904443912343 1017.5019705854004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 TVM 1.3276 - 74 + 1 1.119 39543.6 1.0 8009 4786 12795 HBL1_DMSO_200M_050219_2,12797 HBL1_DMSO_200M_050219_2,12797,PSFWIMRCLTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12798 68.179 314.0 522120.0 25 0 98101.0 + -1 SLNFSSMK 8 151 465.22418666548623 0 465.2242004275322 PEAK CID FTMS 0 0 0 12795 292972.84375 0.6928049132225014 -3 0.0589828491210937 3 Oxidation (M) _SLNFSSM(Oxidation (M))K_ REV__ENSG00000129003|ENST00000644861|VPS13C;REV__ENST00000558338.1_1_15:62199375-62209725:-|nuORF;REV__nc|ENSG00000129003|Q709C8-2|VPS13C;REV__nc|ENSG00000129003|Q709C8-3|VPS13C;REV__nc|ENSG00000129003|Q709C8-4|VPS13C 34.10243960390752 0.1934076185521331 4 TN{I|L}CT 5 -1 39.539 0.0 0.0 4.2587 0.0 0.0 279.12224920812247 114.05685602359608 393.17910523171855 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 1.0994850021680094 0.805462187404089 TN{I|L}CT 4.2587 - 418 + 1 1.119 127509.0 1.0 8010 4786 12795 HBL1_DMSO_200M_050219_2,12798 HBL1_DMSO_200M_050219_2,12798,SLNFSSMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12799 68.185 326.0 333250.0 25 0 21718.0 + 36261 SYFDRYRDSF 10 126 452.5387072825287 1354.594292447786 3 452.5386840701103 MULTI CID FTMS 0 0 0 12795 257102.265625 0.8195803891378662 -4 0.085693359375 4 Unmodified _SYFDRYRDSF_ ENSG00000124160|ENST00000290231|NCOA5 18.373094154950223 0.5392593366289069 4 SY{M(Oxidation (M))|F}{[ET]|[MV]}Y{[QD]|[EN]|[WG]|[KD]|[RS]}CS{I|L} 11 5 + 55.728 0.0 0.0 4.114 4.114 70.036 0.0 0.0 0.0 36.57577319177795 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.2302046884880938 2.0 0.2742275032520141 0.3807196863200844 SY{M(Oxidation (M))|F}{[ET]|[MV]}Y{[QD]|[EN]|[WG]|[KD]|[RS]}CS{I|L};SY{M(Oxidation (M))|F}{[ET]|[MV]}Y{[QD]|[EN]|[WG]|[KD]|[RS]}CTV;SY{M(Oxidation (M))|F}{[ET]|[MV]}Y{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}GV;SY{M(Oxidation (M))|F}{[ET]|[MV]}Y{[WT]|[RM]}C(Carbamidomethyl (C))V;SY{M(Oxidation (M))|F}{[ET]|[MV]}Y{[WT]|[RM]}CGV;SY{M(Oxidation (M))|F}{[ET]|[MV]}Y{[QD]|[EN]|[WG]|[KD]|[RS]}A[MT];S{M(Oxidation (M))|F}Y{[ET]|[MV]}Y{[QD]|[EN]|[WG]|[KD]|[RS]}CS{I|L};S{M(Oxidation (M))|F}Y{[ET]|[MV]}Y{[QD]|[EN]|[WG]|[KD]|[RS]}CTV;S{M(Oxidation (M))|F}Y{[ET]|[MV]}Y{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}GV;S{M(Oxidation (M))|F}Y{[ET]|[MV]}Y{[WT]|[RM]}C(Carbamidomethyl (C))V 4.114;3.8918;3.7699;3.4639;3.3254;2.8396;2.2454;2.0231;1.9013;1.5952 -;-;-;-;-;-;-;-;-;- 964 + 1 1.119 88492.8 1.0 8011 4786 12795 HBL1_DMSO_200M_050219_2,12799 HBL1_DMSO_200M_050219_2,12799,SYFDRYRDSF False True SYFDRYRDSF 68.185245 452.53868407011 3428311.25 12795.0 ENSG00000124160|ENST00000290231|NCOA5 7.050648212432861 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12800 68.191 325.0 150360.0 25 0 11658.0 -1 0 71 770.0273297966103 0 769.6965209841728 PEAK CID FTMS 0 0 0 12795 118837.8125 0.4299759911481351 -1 0.0154495239257812 5 4 {I|L}{I|L} 2 -1 7.0783 0.0 0.0 0.46022 0.0 0.0 928.6534011930268 380.1949862115844 1308.8483874046112 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 0.46022 - 38 + 1 1.119 44687.0 1.0 8012 4786 12795 HBL1_DMSO_200M_050219_2,12800 HBL1_DMSO_200M_050219_2,12800, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12801 68.198 362.0 255450.0 25 0 21452.0 -1 FRYILNCMA 9 141 382.8527573957312 1145.5364427873935 3 382.8528625369072 MULTI CID FTMS 0 0 0 12795 226098.640625 0.7106918550974364 -3 0.0589828491210937 6 Oxidation (M) _FRYILNCM(Oxidation (M))A_ ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6;nc|ENSG00000186976|Q5THR3-5|EFCAB6 7.608950283845883 0.6490595679007971 4 [HV]P{M(Oxidation (M))|F}V{I|L} 6 -1 23.444 0.0 0.0 2.0465 0.0 0.0 0.0 450.11039233256855 450.11039233256855 9.464242445822457 0.0 0.0 0.0 0 0.2887254899964357 0.9208187539523752 0.0 0.0 [HV]P{M(Oxidation (M))|F}V{I|L} 2.0465 - 105 1 1.119 82677.5 1.0 8013 4786 12795 HBL1_DMSO_200M_050219_2,12801 HBL1_DMSO_200M_050219_2,12801,FRYILNCMA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12802 68.204 366.0 319080.0 25 0 48095.0 + 12743 GVNPVGIV 8 119 377.7267295803904 0 377.7264282107353 PEAK CID FTMS 0 0 0 12795 198138.203125 0.7047001367293911 -1 0.0154495239257812 7 Unmodified _GVNPVGIV_ REV__ENSG00000148824|ENST00000317502|MTG1;REV__ENST00000460848.5_1_10:135207724-135215322:+|nuORF;REV__ENST00000473735.1_1_10:135208280-135215808:+|nuORF;REV__ENST00000495014.5_1_10:135207724-135213140:+|nuORF;REV__nc|ENSG00000148824|Q9BT17-2|MTG1 5.760428011301431 0.5786759180849727 4 G 1 -1 9.4897 0.0 0.0 1.2595 0.0 0.0 319.19029280160265 374.2009981744751 693.3912909760777 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 G 1.2595 + + 51 + 1 1.119 96311.2 1.0 8014 4786 12795 HBL1_DMSO_200M_050219_2,12802 HBL1_DMSO_200M_050219_2,12802,GVNPVGIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12803 68.21 304.0 336560.0 25 0 32738.0 6300 DVFSNTLDTL 10 146 562.7749756524464 1123.5353983716927 2 562.7734863162041 MULTI CID FTMS 0 0 0 12795 204254.953125 0.0477960815008143 -6 0.1321563720703125 8 Unmodified _DVFSNTLDTL_ ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE 18.1463463914782 0.5430639438673815 4 [VS]VD{I|L}TR 7 6 59.737 0.0 0.0 5.3168 0.0 0.0 0.0 350.08625208072505 350.08625208072505 43.349169661730535 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.3252574989159953 0.0 [VS]VD{I|L}TR 5.3168 - 275 + 1 1.119 84081.4 1.0 8015 4786 12795 HBL1_DMSO_200M_050219_2,12803 HBL1_DMSO_200M_050219_2,12803,DVFSNTLDTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12805 68.214 6.7 5316400.0 25 0 372900.0 37132 TGYPGEPGLV 10 67 495.2493582655393 988.4841635978786 2 495.2493163943291 MULTI CID FTMS 0 0 0 12804 6346191.0 0.6616016637748963 -2 0.0662307739257812 1 Unmodified _TGYPGEPGLV_ ENSG00000081052|ENST00000396625|COL4A4 18.1463463914782 0.5430639438673815 4 TGY{I|L} 4 6 43.704 0.0 0.0 4.4213 0.0 0.0 0.0 551.2476900690061 551.2476900690061 30.209347275122624 0.0 0.0 0.0 0 0.3807196863200844 1.0969100130080565 0.0 0.0 TGY{I|L} 4.4213 - 164 + 1 1.089 34428.0 1.0 8016 4787 12804 HBL1_DMSO_200M_050219_2,12805 HBL1_DMSO_200M_050219_2,12805,TGYPGEPGLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12806 68.215 18.0 2529500.0 25 0 195550.0 -1 TVCHGSGISC 10 95 510.71496761258777 1019.4153822919756 2 510.7147399783134 MULTI CID FTMS 0 0 0 12804 4702738.5 0.8467433543470482 5 -0.2793426513671875 2 Carbamidomethyl (C) _TVC(Carbamidomethyl (C))HGSGISC_ ENSG00000180228|ENST00000325748|PRKRA;nc|ENSG00000180228|O75569-2|PRKRA;nc|ENSG00000180228|O75569-3|PRKRA 9.38312468134398 0.6832340498775793 4 Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[C(Carbamidomethyl (C))S]TV 8 -1 14.385 0.0 0.0 1.4111 0.0 0.0 100.04272034487047 0.0 100.04272034487047 0.0 7.307131330965719 0.0 0.0 0 0.0 0.0 0.5 0.0 Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[C(Carbamidomethyl (C))S]TV 1.4111 - 53 + 1 1.089 43358.5 1.0 8017 4787 12804 HBL1_DMSO_200M_050219_2,12806 HBL1_DMSO_200M_050219_2,12806,TVCHGSGISC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12807 68.216 32.0 1757500.0 25 0 87082.0 -1 RCHRRRRRCCC 11 58 866.9066694051579 1731.7987858771155 2 866.9081298708916 MULTI CID FTMS 0 0 0 12804 2019300.875 0.1434732166392765 15 -1.3548507690429688 3 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 4 [MN]PN{I|L}NAD[RH]MN{I|L} 13 -1 78.947 0.0 0.0 4.5587 0.0 0.0 0.0 208.07380090885 208.07380090885 56.42854486621903 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.8494850021680094 [MN]PN{I|L}NAD[RH]MN{I|L} 4.5587 - 444 + 1 1.089 44746.2 1.0 8018 4787 12804 HBL1_DMSO_200M_050219_2,12807 HBL1_DMSO_200M_050219_2,12807,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12808 68.217 44.0 2049600.0 25 0 203910.0 -1 0 73 986.483511414154 1970.952469895108 2 986.4824096560478 MULTI CID FTMS 0 0 0 12804 1807156.5 0.5006553043638221 -2 0.0662307739257812 4 4 TVTN{I|L} 5 -1 36.216 0.0 0.0 1.8375 0.0 0.0 1121.5301809320204 318.1109713190063 1439.6411522510266 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3494850021680094 1.2059771852360797 TVTN{I|L} 1.8375 - 253 + 1 1.089 64906.6 1.0 8019 4787 12804 HBL1_DMSO_200M_050219_2,12808 HBL1_DMSO_200M_050219_2,12808, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12809 68.221 151.0 1050000.0 25 0 42968.0 -1 0 115 873.9146114817958 1745.8146700303914 2 874.4171630740166 MULTI CID FTMS 0 0 0 12804 1712805.625 0.2019531218680744 9 -0.7145233154296875 5 4 [MN]PN{I|L}NEA[RH]MN{I|L} 13 -1 88.613 0.0 0.0 5.0757 0.0 0.0 0.0 208.07357202701408 208.07357202701408 52.08449855367964 0.0 0.0 0.0 0 0.7742275032520141 1.5228787452803376 0.0 2.094187677400525 [MN]PN{I|L}NEA[RH]MN{I|L} 5.0757 - 12781 + 1 1.089 109609.1 1.0 8020 4787 12804 HBL1_DMSO_200M_050219_2,12809 HBL1_DMSO_200M_050219_2,12809, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12810 68.222 67.0 1827400.0 25 0 217160.0 + 12926 GYTISVVI 8 129 426.2463273205826 850.4781017079653 2 426.2457763552666 MULTI CID FTMS 0 0 0 12804 1253831.875 0.5300551781529644 5 -0.2793426513671875 6 Unmodified _GYTISVVI_ REV__ENSG00000184954|ENST00000327335|OR6C70 14.581692164780916 0.6954967302934248 4 {[SA]|[TG]}G{I|L}S 5 -1 26.999 0.0 0.0 3.1746 0.0 0.0 0.0 432.2480794833036 432.2480794833036 6.876531584792499 0.0 0.0 0.0 0 0.0 1.154901959985743 1.0044321917401078 0.0 {[SA]|[TG]}G{I|L}S 3.1746 - 287 1 1.089 98761.9 1.0 8021 4787 12804 HBL1_DMSO_200M_050219_2,12810 HBL1_DMSO_200M_050219_2,12810,GYTISVVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12811 68.226 228.0 616880.0 25 0 64954.0 + 4429 DAVVSFAHV 9 142 472.7457782407844 943.4770035483688 2 472.7464172244072 MULTI CID FTMS 0 0 0 12804 685042.9375 0.3465989673136551 8 -0.6246490478515625 7 Unmodified _DAVVSFAHV_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 60.38955033654506 0.025866396858536 4 {[DA]|[EG]}VVS{M(Oxidation (M))|F}AHV 9 0 + 73.031 0.0 0.0 7.7406 7.7406 85.458 0.0 0.0 0.0 19.366130211356065 4.259687322722812 4.259687322722812 4.259687322722812 0 0.8494850021680094 1.6989700043360187 0.8494850021680094 0.0 + + {[DA]|[EG]}VVS{M(Oxidation (M))|F}AHV;{[DA]|[EG]}VVS{M(Oxidation (M))|F}AVH;{[DA]|[EG]}VV[RN]GDV;{[DA]|[EG]}VV[YG][HA]{I|L};{[DA]|[EG]}VW[KS]A[PA];{[DA]|[EG]}VV[YG][{I|L}A]H;[R{M(Oxidation (M))|F}]V{[ES]|[DT]|[{I|L}C]}AHV;WV{[DA]|[EG]}[KS]A[PA];[R{M(Oxidation (M))|F}]V{[ES]|[DT]|[{I|L}C]}AVH;[R{M(Oxidation (M))|F}]VVC[HA]{I|L} 7.7406;7.2891;4.967;3.636;3.5833;3.1845;2.1032;1.7826;1.6517;1.5975 +;-;-;-;-;-;-;-;-;- + 619 + 1 1.089 107051.9 1.0 8022 4787 12804 HBL1_DMSO_200M_050219_2,12811 HBL1_DMSO_200M_050219_2,12811,DAVVSFAHV True True DAVVSFAHV 68.226397 472.746417224407 28972034.0 12804.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 8.754683176676432 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12812 68.232 285.0 318560.0 25 0 69864.0 -1 0 39 1108.4823040316094 0 1108.480273425579 PEAK CID FTMS 0 0 0 12804 566296.1875 0.8491496263296636 -4 0.1097640991210937 8 4 YG 2 -1 9.464 0.0 0.0 0.42728 0.0 0.0 676.1336011278689 1315.7124366378891 1991.846037765758 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.42728 - 22 + 1 1.089 83384.7 1.0 8023 4787 12804 HBL1_DMSO_200M_050219_2,12812 HBL1_DMSO_200M_050219_2,12812, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12814 68.238 213.0 753880.0 25 0 103050.0 -1 0 93 1121.073455730863 0 1121.074023425579 PEAK CID FTMS 0 0 0 12813 669405.125 0.4822746163320104 6 -0.461822509765625 1 4 {I|L}[Y{M(Oxidation (M))|F}]TVTN{I|L} 8 -1 50.984 0.0 0.0 2.276 0.0 0.0 967.4943933822628 318.1106732138395 1285.6050665961022 0.0 0.0 0.0 0.0 0 0.0 0.0 1.610924374808178 2.2302046884880937 {I|L}[Y{M(Oxidation (M))|F}]TVTN{I|L} 2.276 - 6246 + 1 1.089 105677.9 1.0 8024 4788 12813 HBL1_DMSO_200M_050219_2,12814 HBL1_DMSO_200M_050219_2,12814, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12815 68.243 269.0 522250.0 25 0 66821.0 27939 PLTRQISV 8 130 457.27711018241854 912.5396674316372 2 457.2778808474541 MULTI CID FTMS 0 0 0 12813 563618.125 0.5835099047129255 -2 0.0726699829101562 2 Unmodified _PLTRQISV_ ENSG00000141098|ENST00000268797|GFOD2;nc|ENSG00000141098|Q3B7J2-3|GFOD2 48.345845343767074 0.1470278396477103 4 {I|L}{I|L}SV 4 4 48.245 0.0 0.0 5.2869 0.0 0.0 482.2618284229248 0.0 482.2618284229248 0.0 29.292972196075123 0.0 0.0 0 1.2059771852360797 0.0 0.4247425010840047 0.0 {I|L}{I|L}SV 5.2869 - 389 1 1.089 114976.8 1.0 8025 4788 12813 HBL1_DMSO_200M_050219_2,12815 HBL1_DMSO_200M_050219_2,12815,PLTRQISV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12816 68.248 282.0 560520.0 25 0 36272.0 + 34984 SQLSSHDCW 9 163 531.7195680079891 1061.424583082778 2 531.7197753787041 MULTI CID FTMS 0 0 0 12813 375641.28125 0.6745627681509285 -1 0.0218887329101562 3 Unmodified _SQLSSHDCW_ REV__ENST00000579983.1_1_17:16534952-16537956:-|nuORF;REV__nc|ENSG00000164989|Q6TFL3-3|CCDC171 10.823927491677226 0.5436922275383211 4 {[QS]|[NT]}{I|L} 3 -1 24.647 0.0 0.0 2.3221 0.0 0.0 0.0 730.2266820420156 730.2266820420156 0.2766762543934398 0.0 0.0 0.0 0 0.0 0.6020599913279624 0.566901560044258 0.25 {[QS]|[NT]}{I|L} 2.3221 + + 1093 1 1.089 127112.5 1.0 8026 4788 12813 HBL1_DMSO_200M_050219_2,12816 HBL1_DMSO_200M_050219_2,12816,SQLSSHDCW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12817 68.253 305.0 217720.0 25 0 14284.0 + 28884 QALYPVQQTI 10 108 580.8192135745306 1159.6238742158612 2 580.8192626833916 MULTI CID FTMS 0 0 0 12813 299155.46875 0.633525407691176 -4 0.10748291015625 4 Unmodified _QALYPVQQTI_ ENSG00000146414|ENST00000275233|SHPRH;ENST00000433355.6_1_6:146231577-146267398:-|nuORF;ENST00000519632.5_1_6:146239221-146248402:-|nuORF;ENST00000523276.1_1_6:146240471-146248402:-|nuORF;nc|ENSG00000146414|Q149N8-4|SHPRH 32.78568957990786 0.2337485590374503 4 K{I|L}[C(Carbamidomethyl (C))S]VP{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L} 10 6 + 45.186 0.0 0.0 3.8966 3.8966 70.071 0.0 0.0 0.0 23.19521778790565 6.826396346756198 6.826396346756198 3.367421011425193 0 0.6549471895720985 0.0 1.055462187404089 0.0 K{I|L}[C(Carbamidomethyl (C))S]VP{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L};K{I|L}MC[{I|L}T][HT]T{I|L};K{I|L}M{[QS]|[NT]}P{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L};K{I|L}M[KS]P{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L};K{I|L}MC[{I|L}T]{I|L}T[HT];K{I|L}H{[WS]|[C(Carbamidomethyl (C)){I|L}]}[Y{I|L}]T{I|L};K{I|L}HD{[SA]|[TG]}[Y{I|L}]T{I|L};K{I|L}[C(Carbamidomethyl (C))S]VP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};K{I|L}MC[{I|L}T]Q[NP]{I|L};K{I|L}MC[{I|L}T]QQPV 3.8966;3.6062;3.5953;3.5953;3.1332;3.0954;2.9876;2.7768;2.7158;2.6475 -;-;-;-;-;-;-;-;-;- 1358 + 1 1.089 54896.2 1.0 8027 4788 12813 HBL1_DMSO_200M_050219_2,12817 HBL1_DMSO_200M_050219_2,12817,QALYPVQQTI False True QALYPVQQTI 68.253324 580.819262683392 4688296.5 12813.0 ENST00000433355.6_1_6:146231577-146267398:-|nuORF;;ENST00000523276.1_1_6:146240471-146248402:-|nuORF;;nc|ENSG00000146414|Q149N8-4|SHPRH;;ENSG00000146414|ENST00000275233|SHPRH;;ENST00000519632.5_1_6:146239221-146248402:-|nuORF 4.39929739634196 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12818 68.26 379.0 791050.0 25 0 54597.0 + 37999 TNRHSQDGPL 10 220 375.51923291378176 1123.535869341545 3 375.5190917849541 MULTI CID FTMS 0 0 0 12813 263611.28125 0.0688425881433379 -4 0.10748291015625 5 Unmodified _TNRHSQDGPL_ REV__ENSG00000145244|ENST00000273857|CORIN;REV__ENST00000502726.5_1_4:47685742-47840047:-|nuORF;REV__ENST00000503821.5_1_4:47663725-47840047:-|nuORF;REV__nc|ENSG00000145244|Q9Y5Q5-2|CORIN 34.40172386719151 0.2166836008404837 4 [VS]VD{I|L}T{[MG]|[TS]}[CS]{I|L} 11 -1 + 65.613 0.0 0.0 5.8399 5.8399 75.188 0.0 0.0 0.0 17.679115984639168 1.9957235490520449 1.9957235490520449 1.9957235490520449 0 0.6643943297944485 2.0 1.1758337024346173 0.0 [VS]VD{I|L}T{[MG]|[TS]}[CS]{I|L};[VS]VD{I|L}T{[MG]|[TS]}TCV;[VS]VD{I|L}T{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}MV;[VS]V{I|L}DT{[MG]|[TS]}[CS]{I|L};[VS]VD{I|L}T[C(Carbamidomethyl (C))H]{[HG]|PP};[VS]V{I|L}DT{[MG]|[TS]}TCV;[VS]VDH[HK][CS]{I|L};[VS]VDH[HK]TCV;[VS]VDHW[DG]P{I|L};{[SA]|[TG]}Y{[MG]|[TS]}T{I|L}DV[PA] 5.8399;5.6622;5.1672;4.858;4.6977;4.6804;4.5548;4.3772;4.2758;4.2663 -;-;-;-;-;-;-;-;-;- 1988 + 1 1.089 256733.6 1.0 8028 4788 12813 HBL1_DMSO_200M_050219_2,12818 HBL1_DMSO_200M_050219_2,12818,TNRHSQDGPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12819 68.266 350.0 122610.0 25 0 6483.4 39010 TVSAREKLSAF 11 80 604.8375732302666 0 604.8375732302666 PEAK CID FTMS 0 0 0 -1 0 6 Unmodified _TVSAREKLSAF_ ENSG00000221886|ENST00000408953|FAM200C 13.042465956692816 0.4221659143281722 4 PR 2 10 10.969 0.0 0.0 0.90829 0.0 0.0 112.12223421854044 839.3659151666624 951.4881493852027 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PR 0.90829 - 299 + 1 1.089 40580.4 1.0 8029 4788 12813 HBL1_DMSO_200M_050219_2,12819 HBL1_DMSO_200M_050219_2,12819,TVSAREKLSAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12821 68.271 49.0 1905200.0 25 0 334290.0 -1 0 93 322.2109273084506 642.4073016837012 2 322.2104980349541 MULTI CID FTMS 0 0 0 12820 1903994.375 0.4536453333600184 7 -0.6578521728515625 1 4 E{I|L}{I|L}R{I|L} 5 -1 + 60.974 0.0 0.0 9.4915 9.4915 85.671 0.0 0.0 0.0 31.505149978319903 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.0 1.6989700043360187 0.0 0.3807196863200844 E{I|L}{I|L}R{I|L};E{I|L}{I|L}{I|L}R 9.4915;9.0229 -;- 43 + 1 1.089 76717.9 1.0 8030 4789 12820 HBL1_DMSO_200M_050219_2,12821 HBL1_DMSO_200M_050219_2,12821, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12822 68.274 200.0 1323500.0 25 0 135990.0 + 21483 LPHPLLRL 8 150 479.8140515051801 957.6135500771602 2 479.8146850466728 MULTI CID FTMS 0 0 0 12820 1405990.0 0.638563104710447 7 -0.6578521728515625 2 Unmodified _LPHPLLRL_ ENST00000394963.8_1_12:50494063-50494228:+|nuORF 61.357469665136826 0.1155423183535659 4 {I|L}PPH{I|L}{I|L}R{I|L} 8 2 + 97.789 0.0 0.0 10.212 10.212 91.124 0.0 0.0 0.0 85.3695812015733 14.904630595263413 14.904630595263413 6.817496819840656 0 1.5189301784845295 2.0 0.0 0.3494850021680094 {I|L}PPH{I|L}{I|L}R{I|L};{I|L}PP{I|L}H{I|L}R{I|L};{I|L}P{I|L}PH{I|L}R{I|L};[{I|L}P]HP{I|L}{I|L}R{I|L};{I|L}{I|L}PPH{I|L}R{I|L};[{I|L}P]H[R{I|L}][{I|L}P]{I|L};{[HG]|PP}{I|L}H{I|L}{I|L}R{I|L} 10.212;9.4998;9.1855;6.0727;5.9741;3.7492;1.731 -;-;-;+;-;-;- + 899 + 1 1.089 204820.6 1.0 8031 4789 12820 HBL1_DMSO_200M_050219_2,12822 HBL1_DMSO_200M_050219_2,12822,LPHPLLRL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12823 68.276 58.0 1330100.0 25 0 154340.0 + 25249 MVPEDVPRL 9 84 528.2802041516114 1054.5458553700228 2 528.2812988162041 MULTI CID FTMS 0 0 0 12820 1153509.5 0.5771744279559274 -7 0.193145751953125 3 Unmodified _MVPEDVPRL_ ENSG00000272333|ENST00000420124|KMT2B 22.736283301280096 0.2418982879461534 4 {[ET]|[MV]}PEDV[RP]{I|L} 9 0 + 38.047 0.0 0.0 3.6079 3.6079 73.545 0.0 0.0 0.0 11.135638202379042 6.135638202379042 6.135638202379042 6.83971141978024 0 0.3494850021680094 0.0 0.0 0.3807196863200844 + + {[ET]|[MV]}PEDV[RP]{I|L};{[ET]|[MV]}PED{I|L}RPV;[{I|L}T]R{I|L}DEP[DP];{[TV]|[{I|L}S]}N[RK]EP[DP];{[VA]|[{I|L}G]}[SG][RK]EP[DP];{[QS]|[NT]}V[RK]EP[DP];{[TV]|[{I|L}S]}GG[RK]EP[DP];[WP][C(Carbamidomethyl (C))Q]V[RP]{I|L};[WP][C(Carbamidomethyl (C))Q]{I|L}RPV 3.6079;2.9593;2.5535;2.2438;2.0727;1.8623;1.3706;0.8841;0.23551 +;-;-;-;-;-;-;-;- + 129 + 1 1.089 70397.5 1.0 8032 4789 12820 HBL1_DMSO_200M_050219_2,12823 HBL1_DMSO_200M_050219_2,12823,MVPEDVPRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12824 68.278 73.0 1478400.0 25 0 454570.0 + 44925 YPPSMEAVV 9 66 992.474211117294 991.466934650694 1 992.4720336794852 MULTI CID FTMS 0 0 0 12820 1100795.0 0.8869311713750688 11 -1.0657119750976562 4 Unmodified _YPPSMEAVV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 74.42276476219924 0.019389277360085 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PSMEAVV 9 0 + 82.617 0.0 0.0 8.3328 8.3328 95.476 0.0 0.0 0.0 25.6424927368726 43.153434601012606 25.6424927368726 16.197887582883936 0 0.3494850021680094 2.0 1.3539171939081172 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PSMEAVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WE]EAVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{[CP]|[EA]}{M(Oxidation (M))|F}AVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PSMTTPV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WE]TTPV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ATMSP{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{[QN]|[E{I|L}]|[KN]};[{I|L}T][W{M(Oxidation (M))|F}]SP{[QN]|[E{I|L}]|[KN]} 8.3328;6.6991;6.3928;6.3156;4.8568;4.6819;4.4554;2.3229;0.9439;0.72015 +;-;-;-;-;-;-;-;-;- + 659 1 1.089 78929.0 1.0 8033 4789 12820 HBL1_DMSO_200M_050219_2,12824 HBL1_DMSO_200M_050219_2,12824,YPPSMEAVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12825 68.282 208.0 542480.0 25 0 52436.0 + 22362 LPSPLKQTI 9 145 498.8081792005347 995.6018054678694 2 498.8083068728447 MULTI CID FTMS 0 0 0 12820 911858.5 0.003441646449895 62 -6.239738464355469 5 Unmodified _LPSPLKQTI_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 87.25819977447905 0.0157581688916699 4 {I|L}PSP{I|L}KQT{I|L} 9 0 + 100.18 0.0 0.0 10.062 10.062 93.946 0.0 0.0 0.0 72.74929079775967 13.46787486224656 13.46787486224656 9.208187539523747 0 1.7931576817365436 1.5228787452803376 1.7884157219675487 0.3252574989159953 + + {I|L}PSP{I|L}KQT{I|L};{I|L}PSP{I|L}K[AG]T{I|L};{I|L}PSP{I|L}KAAS{I|L};{I|L}PSP{I|L}KAATV;{I|L}PSP{I|L}K[VS]GV;[PS]{I|L}KQT{I|L}P{I|L};[{I|L}P]SKQT{I|L}P{I|L};[PS]{I|L}QKT{I|L}P{I|L};[{I|L}P]SQKT{I|L}P{I|L};[PS]{I|L}KQP{I|L}T{I|L} 10.062;9.1374;8.9596;8.1793;7.7906;5.8248;5.7478;5.3969;5.32;5.0466 +;-;-;-;-;-;-;-;-;- + 2608 + 1 1.089 91206.6 1.0 8034 4789 12820 HBL1_DMSO_200M_050219_2,12825 HBL1_DMSO_200M_050219_2,12825,LPSPLKQTI True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12826 68.286 229.0 804150.0 25 0 186050.0 14718 IKIAPPET 8 134 434.7595561632618 867.5045593933237 2 434.7598449587822 MULTI CID FTMS 0 0 0 12820 850524.0625 0.6035823158223421 7 -0.6578521728515625 6 Unmodified _IKIAPPET_ chr17:49044086-49044991|22|22.18|0.54|5.36|+|0|IGF2BP1,IGF2BP1|1;ENSG00000159217|ENST00000290341|IGF2BP1;nc|ENSG00000159217|Q9NZI8-2|IGF2BP1 2.302733041254933 0.8103549651115762 4 {[SA]|[TG]}Y{I|L} 4 7 14.602 0.0 0.0 1.6832 0.0 0.0 0.0 430.26494082326434 430.26494082326434 4.223396780358083 0.0 0.0 0.0 0 0.0 0.3187587626244128 0.2742275032520141 0.0 {[SA]|[TG]}Y{I|L} 1.6832 - 76 1 1.089 144818.3 1.0 8035 4789 12820 HBL1_DMSO_200M_050219_2,12826 HBL1_DMSO_200M_050219_2,12826,IKIAPPET False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12827 68.29 230.0 831040.0 25 0 139090.0 + 25042 MPTLPPPSV 9 128 469.7542392154372 937.4939254976744 2 469.7550231814384 MULTI CID FTMS 0 0 0 12820 786129.5 0.6835998603894682 -1 0.0347824096679687 7 Unmodified _MPTLPPPSV_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 131.29775728308752 0.0086999656965899 4 [TP]{I|L}MPPS[VP] 9 3 + 55.853 0.0 0.0 5.9577 5.9577 73.24 0.0 0.0 0.0 0.5030511831139464 15.25096908002564 0.5030511831139464 0.7465514834681031 0 1.2302046884880935 0.721246399047171 1.95597718523608 0.0 [TP]{I|L}MPPS[VP];[{I|L}T]SPP[HT]SV;[TP]M{I|L}PPS[VP];[{I|L}T]PMPPS[VP];[{I|L}T]SP[HT]PSV;[{I|L}P]TMPPS[VP];[{I|L}T]S[HT]PPSV;[TP]MP{I|L}PS[VP];[{I|L}T]SPPMPPV;[VS]QQPPS[VP] 5.9577;5.8781;5.7183;5.4385;5.3522;5.1115;4.9705;4.8347;4.7999;4.7198 -;-;-;-;-;-;-;-;-;- 1800 1 1.089 147195.0 1.0 8036 4789 12820 HBL1_DMSO_200M_050219_2,12827 HBL1_DMSO_200M_050219_2,12827,MPTLPPPSV True True MPTLPPPSV 68.290125 469.755023181438 113320504.0 12820.0 nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4 5.922555605570476 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12828 68.292 93.0 880440.0 25 0 96132.0 + 34908 SQIENTPIL 9 114 507.7768031235198 1013.5390533138396 2 507.7764465212822 MULTI CID FTMS 0 0 0 12820 692694.5625 0.5057597983516131 2 -0.1196670532226562 8 Unmodified _SQIENTPIL_ ENSG00000136381|ENST00000258886|IREB2;nc|ENSG00000136381|P48200-2|IREB2 31.26834338654808 0.1333407332142048 4 [AG]S{I|L}ENT 7 6 28.56 0.0 0.0 2.8179 0.0 0.0 0.0 338.20610760931305 338.20610760931305 5.003973031478427 0.0 0.0 0.0 0 0.6747425010840047 1.0969100130080565 0.7902877273156861 0.0 [AG]S{I|L}ENT 2.8179 - 707 1 1.089 72696.1 1.0 8037 4789 12820 HBL1_DMSO_200M_050219_2,12828 HBL1_DMSO_200M_050219_2,12828,SQIENTPIL False True SQIENTPIL 68.292159 507.776446521282 10928733.0 12820.0 ENSG00000136381|ENST00000258886|IREB2;;nc|ENSG00000136381|P48200-2|IREB2 4.478845914204915 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12829 68.297 285.0 454960.0 25 0 25989.0 + 15595 LVNEFDEKL 9 159 553.3279266067219 1104.6413002802435 2 553.8296386599541 MULTI CID FTMS 0 0 0 12820 364587.0 0.3942309765248628 -7 0.193145751953125 9 Unmodified _IPYPRPIHL_ ENST00000392709.8_1_11:125325619-125359673:-|nuORF;nc|ENSG00000149557|Q99689-2|FEZ1;ENSG00000149557|ENST00000278919|FEZ1;ENST00000532981.1_1_11:125333376-125359673:-|nuORF 15.847184025352805 0.4077185912009129 4 {[QS]|[NT]}{I|L}PK 5 8 20.538 0.0 0.0 1.8592 0.0 0.0 0.0 548.3031404504187 548.3031404504187 9.428361047711 0.0 0.0 0.0 0 0.0 0.585026652029182 0.4090970050269639 0.1643943297944484 {[QS]|[NT]}{I|L}PK 1.8592 - 762 1 1.089 105238.9 1.0 8038 4789 12820 HBL1_DMSO_200M_050219_2,12829 HBL1_DMSO_200M_050219_2,12829,IPYPRPIHL False False LVNEFDEKL 68.297405 553.829638659954 2424427.25 12820.0 ENST00000392709.8_1_11:125325619-125359673:-|nuORF;;nc|ENSG00000149557|Q99689-2|FEZ1;;ENSG00000149557|ENST00000278919|FEZ1;;ENST00000532981.1_1_11:125333376-125359673:-|nuORF 1.362532337506612 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12830 68.303 289.0 616840.0 25 0 85441.0 + 37744 TLRCKIGWI 9 169 545.3170514919698 1088.6195500507397 2 545.3171264529228 MULTI CID FTMS 0 0 0 12820 369403.1875 0.3930350591110212 -5 0.1422653198242187 10 Unmodified _TLRCKIGWI_ REV__ENSG00000145604|ENST00000274255|SKP2;REV__nc|ENSG00000145604|Q13309-4|SKP2 8.593279151180031 0.6146971463335029 4 {I|L} 1 -1 12.474 0.0 0.0 1.1459 0.0 0.0 957.5242111608942 0.0 957.5242111608942 0.0 1.6367946719316515 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1459 + + 661 + 1 1.089 143742.9 1.0 8039 4789 12820 HBL1_DMSO_200M_050219_2,12830 HBL1_DMSO_200M_050219_2,12830,TLRCKIGWI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12831 68.309 367.0 368090.0 25 0 45335.0 + 7465 EGPSVILI 8 155 414.2487746677751 0 414.2486755251884 PEAK CID FTMS 0 0 0 12820 298273.84375 1.0 0 0.0 11 Unmodified _EGPSVILI_ REV__ENST00000531819.5_1_1:52251300-52251633:+|nuORF 10.183394434864962 0.5394990767616434 4 {I|L}A 2 -1 10.573 0.0 0.0 1.2793 0.0 0.0 229.1329120291064 410.2027071588501 639.3356191879565 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}A 1.2793 - 46 + 1 1.089 107557.4 1.0 8040 4789 12820 HBL1_DMSO_200M_050219_2,12831 HBL1_DMSO_200M_050219_2,12831,EGPSVILI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12832 68.316 354.0 101730.0 25 0 13758.0 + 27932 PLTQLPIV 8 65 440.7783450168474 0 440.5352966189384 PEAK CID FTMS 0 0 0 -1 0 12 Unmodified _PLTQLPIV_ REV__ENST00000608497.1_1_22:51063838-51064060:-|nuORF 6.354104778181461 0.5763711549229614 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.089 35991.2 1.0 8041 4789 12820 HBL1_DMSO_200M_050219_2,12832 HBL1_DMSO_200M_050219_2,12832,PLTQLPIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12833 68.323 408.0 285530.0 25 0 90454.0 27586 PLDELYEVLAE 11 80 430.8881408572197 0 430.8881408572197 PEAK CID FTMS 0 0 0 -1 0 13 Unmodified _PLDELYEVLAE_ ENST00000510506.5_1_4:3945015-3952874:-|nuORF;ENST00000528684.5_1_11:67565540-67568567:-|nuORF;nc|ENSG00000290994|A6NEL3|FAM86C2P 6.2057823575117 0.47618401536486 4 PY 2 9 7.4743 0.0 0.0 0.86934 0.0 0.0 113.32646469387268 483.2966097467407 596.6230744406133 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PY 0.86934 - 5 + 1 1.089 96300.0 1.0 8042 4789 12820 HBL1_DMSO_200M_050219_2,12833 HBL1_DMSO_200M_050219_2,12833,PLDELYEVLAE False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 12835 68.327 0.33 88442000.0 25 0 11022000.0 + 37126 TGYLNTVTV 9 58 484.2583831501523 966.5022133671048 2 484.2591735720634 MULTI CID FTMS 0 0 0 12834 143399392.0 0.4080056952146066 8 -0.7922744750976562 1 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 11.640296217721598 0.521594087909532 4 CTV 3 7 29.169 0.0 0.0 3.018 0.0 0.0 645.3688343161266 0.0 645.3688343161266 0.0 18.19984993812689 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 CTV 3.018 - 34 + 1 1.067 27037.4 1.0 8043 4790 12834 HBL1_DMSO_200M_050219_2,12835 HBL1_DMSO_200M_050219_2,12835,TGYLNTVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12836 68.328 6.6 7011100.0 25 0 1049700.0 22457 LPVAQVIF 8 57 443.773538906193 885.532524879186 2 443.7737304568291 MULTI CID FTMS 0 0 0 12834 8210209.5 0.4791202561156302 14 -1.4156112670898438 2 Unmodified _LPVAQVIF_ ENST00000254322.2_1_19:14625909-14626227:-|nuORF 24.67388899826682 0.525179942228231 4 {I|L}P 2 6 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3729361154581 672.3729361154581 13.829087576549597 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 141 + 1 1.067 38826.3 1.0 8044 4790 12834 HBL1_DMSO_200M_050219_2,12836 HBL1_DMSO_200M_050219_2,12836,LPVAQVIF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12837 68.329 7.0 4920900.0 25 0 210600.0 + 15591 IPYPLSENNQV 11 75 637.3246690404161 1272.634785147632 2 637.3249389529228 MULTI CID FTMS 0 0 0 12834 7412262.0 0.8800458671481657 4 -0.3704986572265625 3 Unmodified _IPYPLSENNQV_ ENSG00000104549|ENST00000265896|SQLE 74.92900055777586 0.0181202892152222 4 [{I|L}P]YP{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]} 11 0 + 89.768 0.0 0.0 7.0537 7.0537 81.136 0.0 0.0 0.0 2.9659780392387347 7.367585652254192 2.9659780392387347 2.9659780392387347 0 0.0 1.6989700043360187 1.305462187404089 0.7742275032520141 + + [{I|L}P]YP{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]{M(Oxidation (M))|F}{I|L}{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]YPS{I|L}ENN{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]YP{I|L}SENGG{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PS{I|L}ENN{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENGG{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]YP{I|L}SEGGN{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]{M(Oxidation (M))|F}{I|L}S{I|L}ENN{[QV]|[N{I|L}]|[RA]|[KV]} 7.0537;6.8207;6.5807;6.4423;6.3476;6.3365;6.2092;6.1034;6.0618;5.9692 +;-;-;-;-;-;-;-;-;- + 516 1 1.067 32569.1 1.0 8045 4790 12834 HBL1_DMSO_200M_050219_2,12837 HBL1_DMSO_200M_050219_2,12837,IPYPLSENNQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12838 68.331 17.0 4900400.0 25 0 631740.0 + 21945 LPPLHLLR 8 69 320.2117583217455 957.6134455654365 3 320.2114135622978 MULTI CID FTMS 0 0 0 12834 3198345.5 0.4221677622747395 20 -2.0752029418945312 4 Unmodified _LPPLHLLR_ REV__ENST00000295522.3_1_3:190039874-190040219:-|nuORF 17.11289562659939 0.6581031263288403 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 -1 + 66.375 0.0 0.0 6.9313 6.9313 81.171 0.0 0.0 0.0 55.406075122407685 6.989700043360188 6.989700043360188 3.0102999566398125 0 0.0 1.5228787452803376 0.0 0.0 {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 6.9313;6.617;6.3026;4.398 -;+;-;- + 92 + 1 1.067 74775.3 1.0 8046 4790 12834 HBL1_DMSO_200M_050219_2,12838 HBL1_DMSO_200M_050219_2,12838,LPPLHLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12839 68.332 23.0 2842300.0 25 0 262580.0 + 21547 LPIVTPALR 9 68 490.3184029240292 978.6222529148584 2 490.3181945681572 MULTI CID FTMS 0 0 0 12834 2357252.0 0.7961918603742935 4 -0.3704986572265625 5 Unmodified _LPIVTPALR_ ENSG00000182481|ENST00000330459|KPNA2 39.94969957227396 0.0757326808254658 4 {I|L}P{I|L}VT 5 4 69.949 0.0 0.0 7.1477 0.0 0.0 0.0 452.2636560974526 452.2636560974526 56.45365019512085 0.0 0.0 0.0 0 1.1989700043360187 2.0 0.0 0.0 + {I|L}P{I|L}VT 7.1477 + + 53 + 1 1.067 55828.8 1.0 8047 4790 12834 HBL1_DMSO_200M_050219_2,12839 HBL1_DMSO_200M_050219_2,12839,LPIVTPALR True True LPIVTPALR 68.331767 490.318194568157 121349496.0 12834.0 ENSG00000182481|ENST00000330459|KPNA2 7.8979136149088545 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12840 68.333 33.0 1466900.0 25 0 215750.0 + 17862 KQLEEAIQL 9 67 536.3056882786437 1070.5968236240874 2 536.3060180544853 MULTI CID FTMS 0 0 0 12834 1911198.375 1.0 0 0.0 6 Unmodified _KQLEEAIQL_ ENSG00000119397|ENST00000373855|CNTRL;ENST00000373851.6_1_9:123874787-123912836:+|nuORF;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 26.268140514670165 0.1969607489560049 4 [Q{I|L}]KEEA{I|L}Q{I|L} 9 2 + 54.584 0.0 0.0 5.0985 5.0985 84.804 0.0 0.0 0.0 9.362784334425411 38.99983571221869 9.362784334425411 15.228787452803374 0 0.6237125054200234 0.0 0.4247425010840047 0.2215141619232908 [Q{I|L}]KEEA{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}A[KG]EA{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}AE[KG]A{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}EA[KG]A{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[KQ]EA{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}AE[KQ]{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}E[KQ]A{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}EA[KQ]{I|L}Q{I|L};[NP][KC][KG]A{I|L}Q{I|L};[NP][KC][KQ]{I|L}Q{I|L} 5.0985;3.676;3.676;3.5115;3.347;3.0659;2.9014;2.9014;1.124;0.51386 -;-;-;-;-;-;-;-;-;- 119 1 1.067 45482.8 1.0 8048 4790 12834 HBL1_DMSO_200M_050219_2,12840 HBL1_DMSO_200M_050219_2,12840,KQLEEAIQL False True KQLEEAIQL 68.332946 536.306018054485 86272056.0 12834.0 ENST00000373851.6_1_9:123874787-123912836:+|nuORF;;nc|ENSG00000119397|Q7Z7A1-5|CNTRL;;ENSG00000119397|ENST00000373855|CNTRL 3.950905323028565 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12841 68.334 45.0 1342300.0 25 0 303890.0 + 6280 DVANKIGII 9 77 471.7852107057819 941.5558684783638 2 471.7853881716728 MULTI CID FTMS 0 0 0 12834 1214745.625 0.222142645076951 -3 0.1132125854492187 7 Unmodified _DVANKIGII_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 24.020572477871973 0.2255576514309169 4 [DV]AN 4 5 41.682 0.0 0.0 4.427 0.0 0.0 0.0 539.3581026666624 539.3581026666624 1.359921914233908 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + [DV]AN 4.427 + + 175 + 1 1.067 53432.1 1.0 8049 4790 12834 HBL1_DMSO_200M_050219_2,12841 HBL1_DMSO_200M_050219_2,12841,DVANKIGII False True DVANKIGII 68.334185 471.785388171673 96869912.0 12834.0 ENST00000471152.1_2_3:161146917-161147007:-|nuORF;;ENSG00000198242|ENST00000422514|RPL23A;;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 4.722543398539226 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12842 68.335 37.0 1114900.0 25 0 179100.0 + 43605 YAFNMKATV 9 70 522.7624437942544 1043.5103346553087 2 522.7625610232353 MULTI CID FTMS 0 0 0 12834 1181109.25 0.0197517769101847 14 -1.4156112670898438 8 Unmodified _YAFNMKATV_ ENSG00000109971|ENST00000534624|HSPA8 34.40172386719151 0.1061884637610825 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM[KA]TV 9 0 + 55.449 0.0 0.0 5.3137 5.3137 78.359 0.0 0.0 0.0 32.54309664956708 11.993559221610964 11.993559221610964 5.465978039238735 0 0.4247425010840047 2.0 0.6307196863200843 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}NM[KA]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}[EP]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GGM[KA]TV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}A[KA]M{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}DT 5.3137;4.7899;4.4313;4.04;1.7188 +;-;-;-;- + 144 + 1 1.067 39636.2 1.0 8050 4790 12834 HBL1_DMSO_200M_050219_2,12842 HBL1_DMSO_200M_050219_2,12842,YAFNMKATV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12843 68.337 63.0 1245200.0 25 0 113480.0 -1 0 84 653.3286866698638 1956.9642306097912 3 653.6629516482353 MULTI CID FTMS 0 0 0 12834 1151516.375 0.2166781213718926 8 -0.7922744750976562 9 4 TVTN{I|L}{M(Oxidation (M))|F}GV 8 -1 33.586 0.0 0.0 1.7162 0.0 0.0 1107.5409040490474 0.0 1107.5409040490474 0.0 11.550493064333214 0.0 0.0 0 0.4247425010840047 0.0 0.8494850021680094 1.1861818737241734 TVTN{I|L}{M(Oxidation (M))|F}GV 1.7162 - 1709 + 1 1.067 67301.5 1.0 8051 4790 12834 HBL1_DMSO_200M_050219_2,12843 HBL1_DMSO_200M_050219_2,12843, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12844 68.339 68.0 881980.0 25 0 180090.0 + 39209 TYSEFAREL 9 72 558.2716975375329 1114.5288421418657 2 558.2717162966728 MULTI CID FTMS 0 0 0 12834 905301.9375 0.2487289518932503 13 -1.304290771484375 10 Unmodified _TYSEFAREL_ nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-4|PRC1 29.84058131909904 0.1515068451768857 4 [YT]SE{M(Oxidation (M))|F}A{[RE]|[WV]}{I|L} 9 0 + 64.894 0.0 0.0 5.8225 5.8225 89.963 0.0 0.0 0.0 54.29767879973075 4.175188874398359 4.175188874398359 42.28376106730632 0 0.805462187404089 2.0 0.4247425010840047 0.3494850021680094 + + [YT]SE{M(Oxidation (M))|F}A{[RE]|[WV]}{I|L};[YT]EE[KS]{I|L}[{M(Oxidation (M))|F}V] 5.8225;2.0286 +;- + 124 + 1 1.067 53549.0 1.0 8052 4790 12834 HBL1_DMSO_200M_050219_2,12844 HBL1_DMSO_200M_050219_2,12844,TYSEFAREL False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 12845 68.344 273.0 460190.0 25 0 14189.0 -1 FRYILNCMA 9 156 573.7758536951478 1145.5371544570955 2 573.7765380740166 MULTI CID FTMS 0 0 0 12834 602520.625 0.8693310329914262 2 -0.1661300659179687 11 Oxidation (M) _FRYILNCM(Oxidation (M))A_ ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6;nc|ENSG00000186976|Q5THR3-5|EFCAB6 15.847184025352805 0.4077185912009129 4 [HV]{M(Oxidation (M))|F}VP{I|L}N[CS]M 10 -1 + 56.648 0.0 0.0 4.9451 4.9451 69.811 0.0 0.0 0.0 8.081845230116201 13.679767852945943 8.081845230116201 1.249387366082999 0 0.805462187404089 1.0969100130080565 0.0 0.0 [HV]{M(Oxidation (M))|F}VP{I|L}N[CS]M;[HV]P{I|L}{M(Oxidation (M))|F}VN[CS]M;[HV]{M(Oxidation (M))|F}P{I|L}VN[CS]M;[HV]P{M(Oxidation (M))|F}{I|L}VN[CS]M;[HV]{M(Oxidation (M))|F}PV{I|L}N[CS]M;[HV]P{M(Oxidation (M))|F}V{I|L}N[CS]M;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{M(Oxidation (M))|F}VN[CS]M;[{I|L}P]HV{M(Oxidation (M))|F}VN[CS]M;[HV]{M(Oxidation (M))|F}VP{I|L}GG[CS]M;[HV]P{I|L}{M(Oxidation (M))|F}VGG[CS]M 4.9451;4.8361;4.7914;4.6823;4.5286;4.4196;4.2396;4.2029;4.1451;4.036 -;-;-;-;-;-;-;-;-;- 1719 1 1.067 102570.1 1.0 8053 4790 12834 HBL1_DMSO_200M_050219_2,12845 HBL1_DMSO_200M_050219_2,12845,FRYILNCMA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12846 68.345 75.0 715290.0 25 0 61127.0 + 22843 LRSPLCVL 8 83 450.7700398607845 899.5255267883689 2 450.7715026736259 MULTI CID FTMS 0 0 0 12834 490274.46875 0.1159936477572348 -3 0.1132125854492187 12 Unmodified _LRSPLCVL_ ENST00000423902.6_1_8:61591532-61591613:+|nuORF 11.640296217721598 0.738950129755968 4 CV[HA]K{I|L} 6 7 21.616 0.0 0.0 2.4031 0.0 0.0 230.16116018856263 0.0 230.16116018856263 0.0 10.77876958070557 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 CV[HA]K{I|L} 2.4031 - 117 + 1 1.067 50145.7 1.0 8054 4790 12834 HBL1_DMSO_200M_050219_2,12846 HBL1_DMSO_200M_050219_2,12846,LRSPLCVL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12847 68.351 326.0 471690.0 25 0 29514.0 + 13912 HVVEILVET 9 159 519.7947846534107 1037.575016373621 2 519.7950927615166 MULTI CID FTMS 0 0 0 12834 361485.46875 0.0265261277267882 19 -1.9208221435546875 13 Unmodified _HVVEILVET_ ENSG00000170779|ENST00000336219|CDCA4 57.47134341890925 0.0274820932774257 4 [HV]VE{I|L}{I|L}V{[ET]|[MV]} 9 0 + 48.241 0.0 0.0 4.6494 4.6494 70.878 0.0 0.0 0.0 14.49092531119419 7.147642715192504 7.147642715192504 2.430380486862944 0 0.25 1.3010299956639813 0.2887254899964357 0.0 + + [HV]VE{I|L}{I|L}V{[ET]|[MV]};[HV]{I|L}D{I|L}{I|L}V{[ET]|[MV]};[HV]VE{I|L}V{I|L}{[ET]|[MV]};[HV]{I|L}D{I|L}V{I|L}{[ET]|[MV]};[HV]V{I|L}E{I|L}V{[ET]|[MV]};[HV]{I|L}VE{I|L}V{[ET]|[MV]};[HV]{I|L}EV{I|L}V{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}{I|L}V{[ET]|[MV]};[HV]V{I|L}EV{I|L}{[ET]|[MV]};[HV]{I|L}E{I|L}VV{[ET]|[MV]} 4.6494;4.4151;4.0691;3.8349;3.6211;3.3869;3.3224;3.2527;3.0409;3.0204 +;-;-;-;-;-;-;-;-;- + 1095 1 1.067 119783.6 1.0 8055 4790 12834 HBL1_DMSO_200M_050219_2,12847 HBL1_DMSO_200M_050219_2,12847,HVVEILVET True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12848 68.358 387.0 321740.0 25 0 31278.0 + 11887 GLVGKPID 8 136 399.7386489855234 797.4627450378468 2 399.7386657595634 MULTI CID FTMS 0 0 0 12834 318742.8125 1.0 0 0.0 14 Unmodified _GLVGKPID_ REV__LYST|p.V2190I|1|0.27|ENSG00000143669|chr1:235759285-235759285|C/T|missense_variant 0.7936320650641473 0.8195151834710337 4 {M(Oxidation (M))|F} 1 -1 12.218 0.0 0.0 1.5322 0.0 0.0 632.3832752886266 0.0 632.3832752886266 0.0 3.5892767424819603 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.5322 - 18 + 1 1.067 99060.4 1.0 8056 4790 12834 HBL1_DMSO_200M_050219_2,12848 HBL1_DMSO_200M_050219_2,12848,GLVGKPID False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12849 68.365 378.0 387740.0 25 0 21709.0 + 32116 RVMEEIRNLTV 11 131 453.9182489935495 1358.7329175808484 3 453.9182311892509 MULTI CID FTMS 0 0 0 12834 300857.15625 1.0 0 0.0 15 Unmodified _RVMEEIRNLTV_ ENSG00000066136|ENST00000447388|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 39.21299971606389 0.2245192836502623 4 [RV]MEE[R{I|L}]N{I|L}TV 11 0 + 49.812 0.0 0.0 3.6661 3.6661 63.076 0.0 0.0 0.0 0.1672178860286166 0.1672178860286166 0.1672178860286166 0.1672178860286166 0 0.4247425010840047 0.0 0.4247425010840047 0.3807196863200844 + + [RV]MEE[R{I|L}]N{I|L}TV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}N[R{I|L}]EE[PA]TV;{[TV]|[{I|L}S]}[VS]EE[R{I|L}]N{I|L}TV;[VS]{[TV]|[{I|L}S]}EE[R{I|L}]N{I|L}TV;{[ET]|[MV]}REE[R{I|L}]N{I|L}TV;[EP]S{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[R{I|L}]N{I|L}TV;[RV]MEE[R{I|L}]GG{I|L}TV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}N[R{I|L}]EE[PA]S{I|L};[AG]HH{I|L}E[R{I|L}]N{I|L}TV;{[SA]|[TG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E[R{I|L}]N{I|L}TV 3.6661;3.6538;3.5858;3.4077;3.3825;3.1608;2.9942;2.8821;2.8426;2.7834 +;-;-;-;-;-;-;-;-;- + 706 1 1.067 121993.5 1.0 8057 4790 12834 HBL1_DMSO_200M_050219_2,12849 HBL1_DMSO_200M_050219_2,12849,RVMEEIRNLTV False True RVMEEIRNLTV 68.364992 453.918231189251 2676838.25 12834.0 ENSG00000066136|ENST00000447388|NFYC;;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC;;NFYC|p.R39Q|1|0.44|ENSG00000066136|chr1:40747544-40747544|G/A|missense_variant;;nc|ENSG00000066136|Q13952-5|NFYC;;ENST00000424419.6_1_1:41157373-41232429:+|nuORF 6.346272150675456 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12850 68.372 378.0 396730.0 25 0 31454.0 + 40606 VLAETLTQV 9 197 487.2816837122827 972.5488144913654 2 487.2815429568291 MULTI CID FTMS 0 0 0 12834 236770.25 0.8878528887026984 -1 0.0565414428710937 16 Unmodified _VLAETLTQV_ ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP 57.47134341890925 0.0274820932774257 4 [{I|L}V]AET{I|L}QS{I|L} 9 3 + 42.111 0.0 0.0 4.33 4.33 65.203 0.0 0.0 0.0 11.933115814076338 10.061668675368622 10.061668675368622 0.0494063634858576 0 0.5044321917401079 2.0 0.8807196863200843 0.0 [{I|L}V]AET{I|L}QS{I|L};[{I|L}V]N{I|L}[MT]VA{I|L};[{I|L}V]N{I|L}[MT]AV{I|L};[{I|L}V]ATE{I|L}QS{I|L};[{I|L}V]N{I|L}[CS]{I|L}V{I|L};[{I|L}V]N{I|L}{[ES]|[DT]|[{I|L}C]}SV{I|L};[{I|L}V]AR{[ES]|[DT]|[{I|L}C]}SV{I|L};[{I|L}V]AETAASV{I|L};[{I|L}V]GG{I|L}[MT]VA{I|L};[{I|L}V]GG{I|L}[MT]AV{I|L} 4.33;4.3249;4.3249;4.0204;4.0153;3.9157;3.4777;3.4312;3.3781;3.3781 -;-;-;-;-;-;-;-;-;- 3906 1 1.067 116882.3 1.0 8058 4790 12834 HBL1_DMSO_200M_050219_2,12850 HBL1_DMSO_200M_050219_2,12850,VLAETLTQV True True VLAETLTQV 68.371777 487.281542956829 2726477.5 12834.0 ENSG00000005339|ENST00000262367|CREBBP;;nc|ENSG00000005339|Q92793-2|CREBBP 5.999278704325358 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12851 68.379 430.0 300760.0 25 0 72171.0 -1 0 54 1096.461549065033 3286.3628177953 3 1096.796801745892 MULTI CID FTMS 0 0 0 12834 199442.125 0.3269175920408937 -2 0.0913238525390625 17 4 N{M(Oxidation (M))|F}V{[QD]|[EN]|[WG]|[KD]|[RS]}G 6 -1 17.312 0.0 0.0 0.52679 0.0 0.0 2206.8311538322123 416.19550501041255 2623.026658842625 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3807196863200844 N{M(Oxidation (M))|F}V{[QD]|[EN]|[WG]|[KD]|[RS]}G 0.52679 - 82 + 1 1.067 113518.4 1.0 8059 4790 12834 HBL1_DMSO_200M_050219_2,12851 HBL1_DMSO_200M_050219_2,12851, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12852 68.386 366.0 216690.0 25 0 13143.0 + + 36631 RYQEVIQEL 9 131 589.8186525005527 0 589.8190185427666 PEAK CID FTMS 0 0 0 12834 218912.25 1.0 0 0.0 18 Unmodified _TASKMAVMLNL_ ENST00000554523.5_1_14:68228796-68282710:-|nuORF;ENST00000554557.5_1_14:68248216-68272009:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;ENSG00000072121|ENST00000347230|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 24.99096001346401 0.2903797476557471 4 Q{I|L}V[DC]{I|L}N 7 -1 27.039 0.0 0.0 2.296 0.0 0.0 261.1486401145442 128.07227502994377 389.220915144488 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.7302046884880937 Q{I|L}V[DC]{I|L}N 2.296 - 311 + 1 1.067 63280.5 1.0 8060 4790 12834 HBL1_DMSO_200M_050219_2,12852 HBL1_DMSO_200M_050219_2,12852,TASKMAVMLNL False False RYQEVIQEL 68.386062 589.819018542767 770911.1875 12834.0 ENST00000554523.5_1_14:68228796-68282710:-|nuORF;;ENST00000554557.5_1_14:68248216-68272009:-|nuORF;;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;;ENSG00000072121|ENST00000347230|ZFYVE26;;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 2.813484668731689 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12854 68.39 16.0 3520600.0 25 0 367310.0 42701 VTYYDPTF 8 61 503.23217100274496 1004.44978907229 2 503.2321044802666 MULTI CID FTMS 0 0 0 12853 2937736.25 0.1496760252301641 2 -0.2451858520507812 1 Unmodified _VTYYDPTF_ ENSG00000181143|ENST00000397910|MUC16 5.230669730166228 0.792582437072536 4 VT 2 6 22.078 0.0 0.0 2.1981 0.0 0.0 0.0 801.3125791256266 801.3125791256266 15.088643834802156 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + VT 2.1981 + + 10 + 1 1.049 48573.9 1.0 8061 4791 12853 HBL1_DMSO_200M_050219_2,12854 HBL1_DMSO_200M_050219_2,12854,VTYYDPTF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12855 68.391 34.0 1958100.0 25 0 168360.0 + 21825 LPNNRELYI 9 79 566.3112506145966 1130.607948295993 2 566.3115722537041 MULTI CID FTMS 0 0 0 12853 2325651.5 0.9912588006848212 -1 0.0631256103515625 2 Unmodified _LPNNRELYI_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78110025-78110175:-|nuORF 40.72490554402381 0.0714771638475563 4 [{I|L}P]E{[WT]|[RM]}PY{I|L}{I|L} 9 5 + 58.043 0.0 0.0 5.1338 5.1338 74.684 0.0 0.0 0.0 16.00379364601565 23.04544576843845 16.00379364601565 3.26606256887672 0 0.7742275032520141 1.6989700043360187 0.0 0.6989700043360187 [{I|L}P]E{[WT]|[RM]}PY{I|L}{I|L};[{I|L}P]E{[WT]|[RM]}P{I|L}Y{I|L};[Y{I|L}]AA[HA]P{I|L}Y{I|L};[Y{I|L}]AA[HA]PY{I|L}{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}P[HA]{[WT]|[RM]}{I|L};[NP]AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Y{I|L}{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}P[HA]{I|L}{[WT]|[RM]};[NP]AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}{I|L}{[SA]|[TG]}{[SA]|[TG]}Y{I|L};{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}WW{I|L}{[WT]|[RM]} 5.1338;4.8449;3.4562;3.4359;2.1797;2.1747;1.9535;1.8858;1.4736;1.1216 -;-;-;-;-;-;-;-;-;- 203 1 1.049 56455.7 1.0 8062 4791 12853 HBL1_DMSO_200M_050219_2,12855 HBL1_DMSO_200M_050219_2,12855,LPNNRELYI True True LPNNRELYI 68.391358 566.311572253704 140844944.0 12853.0 ENSG00000141543|ENST00000649764|EIF4A3;;ENST00000575978.1_1_17:78110025-78110175:-|nuORF 5.499997933705648 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12856 68.393 43.0 1483400.0 25 0 118880.0 7372 EGEKSSQQV 9 111 331.16100712044613 990.4611919615384 3 331.1605407595634 MULTI CID FTMS 0 0 0 12853 1667982.625 0.4895888636158672 9 -0.946044921875 3 Unmodified _EGEKSSQQV_ ENST00000444867.1_1_7:84783031-84816134:-|nuORF 7.910154910731844 0.6385446671287552 4 TVGG 4 9 23.928 0.0 0.0 2.4158 0.0 0.0 134.05748235256323 539.2218111627561 673.2792935153193 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 TVGG 2.4158 - 277 + 1 1.049 59099.1 1.0 8063 4791 12853 HBL1_DMSO_200M_050219_2,12856 HBL1_DMSO_200M_050219_2,12856,EGEKSSQQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12857 68.394 19.0 3033500.0 25 0 333260.0 + 10370 FSNKGADVFL 10 92 549.2855839883468 1096.5566150434936 2 549.2853881716728 MULTI CID FTMS 0 0 0 12853 1201836.125 0.1467277837030352 -2 0.1196670532226562 4 Unmodified _FSNKGADVFL_ ENSG00000104812|ENST00000323798|GYS1;nc|ENSG00000104812|P13807-2|GYS1 26.020703789607367 0.3840598856887971 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SN{I|L}[NG]V{M(Oxidation (M))|F}{I|L} 10 4 + 64.288 0.0 0.0 5.8628 5.8628 81.322 0.0 0.0 0.0 6.020599913279625 9.457640437841874 6.020599913279625 6.020599913279625 0 0.6435078169319297 1.6989700043360187 0.9291746928241126 1.4916440611282626 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SN{I|L}[NG]V{M(Oxidation (M))|F}{I|L};[YG]TN{I|L}[NG]V{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}N[NG]V{M(Oxidation (M))|F}{I|L};{[QS]|[NT]}GY{I|L}[NG]V{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SN{I|L}[RN]{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SGG{I|L}[NG]V{M(Oxidation (M))|F}{I|L};[YG]T{I|L}N[NG]V{M(Oxidation (M))|F}{I|L};{[SA]|[TG]}YN{I|L}[NG]V{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}E]N{I|L}{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}{I|L};[YG]TN{I|L}[RN]{M(Oxidation (M))|F}{I|L} 5.8628;5.3137;4.9391;4.5762;4.5325;4.4012;4.3901;4.1272;4.0451;3.9835 -;-;-;-;-;-;-;-;-;- 1139 1 1.049 48326.9 1.0 8064 4791 12853 HBL1_DMSO_200M_050219_2,12857 HBL1_DMSO_200M_050219_2,12857,FSNKGADVFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12858 68.395 71.0 833080.0 25 0 63457.0 14475 IGESHWPQLV 10 89 583.3048244501163 1164.5950959670324 2 583.3051635622978 MULTI CID FTMS 0 0 0 12853 1282650.125 0.4399195530185924 10 -1.0436477661132812 5 Unmodified _IGESHWPQLV_ ENST00000482990.1_1_2:27479185-27480240:-|nuORF 15.847184025352805 0.5816416552707754 4 [TP]TSTM{I|L}{I|L} 8 8 37.07 0.0 0.0 3.1831 0.0 0.0 0.0 317.1358048649467 317.1358048649467 7.244788792220511 0.0 0.0 0.0 0 0.0 0.0 2.110924374808178 0.0 [TP]TSTM{I|L}{I|L} 3.1831 - 505 1 1.049 53512.4 1.0 8065 4791 12853 HBL1_DMSO_200M_050219_2,12858 HBL1_DMSO_200M_050219_2,12858,IGESHWPQLV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12859 68.397 44.0 1479300.0 25 0 176620.0 + 38812 TVFHECNR 8 79 335.82397606874986 1004.4500988064495 3 335.8235351443291 MULTI CID FTMS 0 0 0 12853 1056659.75 0.1071556094199118 2 -0.2451858520507812 6 Unmodified _TVFHECNR_ REV__ENSG00000133321|ENST00000255688|PLAAT4;REV__ENST00000537871.1_1_11:63304294-63313725:+|nuORF;REV__ENST00000544107.1_1_11:63304348-63313725:+|nuORF;REV__nc|ENSG00000133321|Q9UL19-2|PLAAT4 11.640296217721598 0.738950129755968 4 TVT 3 -1 32.307 0.0 0.0 3.2164 0.0 0.0 0.0 700.2641990136561 700.2641990136561 20.71333751784365 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 TVT 3.2164 - 48 + 1 1.049 56461.3 1.0 8066 4791 12853 HBL1_DMSO_200M_050219_2,12859 HBL1_DMSO_200M_050219_2,12859,TVFHECNR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12860 68.401 262.0 995860.0 25 0 83851.0 + 34886 SQHPVTVVYIE 11 140 424.55842091939263 1270.653433358378 3 424.5585510134697 MULTI CID FTMS 0 0 0 12853 794636.625 0.9065973135334732 9 -0.946044921875 7 Unmodified _SQHPVTVVYIE_ REV__ENST00000572275.1_1_17:7826422-7827118:-|nuORF 20.41088430110776 0.6105771140609675 4 {[SA]|[TG]}Y{I|L}NTV[YV]{I|L}E 11 -1 + 50.455 0.0 0.0 3.9708 3.9708 73.938 0.0 0.0 0.0 6.198091682105705 7.737217215564108 6.198091682105705 6.198091682105705 0 0.0 1.3010299956639813 1.2689301784845295 1.055462187404089 {[SA]|[TG]}Y{I|L}NTV[YV]{I|L}E;{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}KGY{M(Oxidation (M))|F}PE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YGKGV[YV]{I|L}E;[YG]T{I|L}NTV[YV]{I|L}E;{[SA]|[TG]}G{I|L}{[TV]|[{I|L}S]}[HT]{I|L}{M(Oxidation (M))|F}PE;{[TV]|[{I|L}S]}[HS]RW{I|L}{M(Oxidation (M))|F}PE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{[QN]|[E{I|L}]|[KN]}V[YV]{I|L}E;{[SA]|[TG]}G{I|L}{[DS]|[MA]|[CV]|TT}[HV]{I|L}{M(Oxidation (M))|F}PE;{[SA]|[TG]}G{I|L}{[TV]|[{I|L}S]}[HT]{M(Oxidation (M))|F}{I|L}PE;{[TV]|[{I|L}S]}[HS]RW{M(Oxidation (M))|F}{I|L}PE 3.9708;3.483;3.4744;3.4412;3.4223;3.4127;3.2887;3.1092;3.0468;3.0372 -;-;-;-;-;-;-;-;-;- 3166 1 1.049 206043.8 1.0 8067 4791 12853 HBL1_DMSO_200M_050219_2,12860 HBL1_DMSO_200M_050219_2,12860,SQHPVTVVYIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12861 68.407 278.0 940770.0 25 0 100640.0 -1 0 103 979.4863806345644 1956.9582083359285 2 979.4865600466728 MULTI CID FTMS 0 0 0 12853 774637.375 0.4974425503970607 9 -0.946044921875 8 4 VTN{I|L}C{[TV]|[{I|L}S]} 7 -1 44.829 0.0 0.0 2.2908 0.0 0.0 1208.5811763499817 0.0 1208.5811763499817 0.0 8.5410612595726 0.0 0.0 0 0.0 0.0 1.524227503252014 1.1549471895720984 VTN{I|L}C{[TV]|[{I|L}S]} 2.2908 - 9275 + 1 1.049 169668.4 1.0 8068 4791 12853 HBL1_DMSO_200M_050219_2,12861 HBL1_DMSO_200M_050219_2,12861, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12862 68.412 290.0 679400.0 25 0 162060.0 42758 VVGAPRGR 8 127 406.2486249125759 810.4826968919517 2 406.2484313845634 MULTI CID FTMS 0 0 0 12853 703681.0 0.0856145173145953 -3 0.154449462890625 9 Unmodified _VVGAPRGR_ ENSG00000204120|ENST00000373563|GIGYF2;ENST00000463554.5_1_2:233599907-233635753:+|nuORF;nc|ENSG00000204120|Q6Y7W6-3|GIGYF2;nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;nc|ENSG00000204120|Q6Y7W6-5|GIGYF2 0.7936320650641473 0.8195151834710337 4 {M(Oxidation (M))|F} 1 8 8.8224 0.0 0.0 1.0885 0.0 0.0 645.403593353669 0.0 645.403593353669 0.0 0.6120320004645272 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0885 - 37 + 1 1.049 156204.7 1.0 8069 4791 12853 HBL1_DMSO_200M_050219_2,12862 HBL1_DMSO_200M_050219_2,12862,VVGAPRGR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12863 68.418 319.0 1552400.0 25 0 213570.0 + 20753 LLSSNLCSL 9 200 475.253045510102 948.491538087004 2 475.2535278201103 MULTI CID FTMS 0 0 0 12853 502227.625 0.3055186440451132 9 -0.946044921875 10 Unmodified _LLSSNLCSL_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 99.79894945604345 0.0109923542231827 4 {[TV]|[{I|L}S]}VTN{I|L}CTV 9 5 + 98.915 0.0 0.0 10.429 10.429 92.581 0.0 0.0 0.0 6.396957046523994 70.38840768833325 6.396957046523994 8.621257863322768 0 2.4489700043360187 1.2218487496163564 1.4916440611282626 1.4436726795685342 {[TV]|[{I|L}S]}VTN{I|L}CTV;TVVTN{I|L}CTV;TGY{I|L}NT[PA]{I|L};TVVTN{I|L}CS{I|L};TGY{I|L}N[VS]PV;{[TV]|[{I|L}S]}VTGG{I|L}CTV;TVVTN{I|L}TCV;{[TV]|[{I|L}S]}VTCQVTV;{[TV]|[{I|L}S]}Q[VS]{I|L}CTV;TVVTGG{I|L}CTV 10.429;9.5197;8.6042;8.3564;8.141;7.9357;7.6009;7.5219;7.4001;7.2519 -;-;-;-;-;-;-;-;-;- 6357 1 1.049 368241.1 1.0 8070 4791 12853 HBL1_DMSO_200M_050219_2,12863 HBL1_DMSO_200M_050219_2,12863,LLSSNLCSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12864 68.424 349.0 504980.0 25 0 26517.0 + 26326 NSALVLKV 8 176 422.26841150463895 842.5222700760779 2 422.2682678103447 MULTI CID FTMS 0 0 0 12853 474062.0 0.3457301619048991 4 -0.4483108520507812 11 Unmodified _NSALVLKV_ ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF 62.57269311338072 0.1158273023829763 4 [NS]A{I|L}V{I|L}KV 8 0 + 58.966 0.0 0.0 6.9988 6.9988 94.785 0.0 0.0 0.0 45.76758013077252 11.40978057358332 11.40978057358332 58.96607977052276 0 1.5010912013506126 1.5228787452803376 0.0 0.1382104921644452 + + [NS]A{I|L}V{I|L}KV 6.9988 + + 201 + 1 1.049 137997.4 1.0 8071 4791 12853 HBL1_DMSO_200M_050219_2,12864 HBL1_DMSO_200M_050219_2,12864,NSALVLKV True True NSALVLKV 68.424064 422.268267810345 12966122.0 12853.0 ENSG00000139687|ENST00000267163|RB1;;ENST00000525036.1_1_13:48877982-48934322:+|nuORF 4.460063695907593 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12865 68.43 299.0 418570.0 25 0 46370.0 + 18249 KVIDVTVPLQ 10 137 556.3398926968279 1110.6652324604556 2 556.3401977419853 MULTI CID FTMS 0 0 0 12853 467449.09375 1.0 0 0.0 12 Unmodified _KVIDVTVPLQ_ ENSG00000007923|ENST00000377577|DNAJC11;ENST00000465508.5_1_1:6695737-6697639:-|nuORF;nc|ENSG00000007923|Q9NVH1-3|DNAJC11 84.5221896805406 0.0133617038110099 4 VVTVP{I|L}Q 7 3 75.438 0.0 0.0 6.7921 0.0 0.0 356.2053417061107 0.0 356.2053417061107 0.0 26.33249445893682 0.0 0.0 0 0.7614393726401688 0.0 0.8494850021680094 1.1861818737241734 VVTVP{I|L}Q 6.7921 - 2074 + 1 1.049 100631.7 1.0 8072 4791 12853 HBL1_DMSO_200M_050219_2,12865 HBL1_DMSO_200M_050219_2,12865,KVIDVTVPLQ True True KVIDVTVPLQ 68.429552 556.340197741985 5994684.0 12853.0 nc|ENSG00000007923|Q9NVH1-3|DNAJC11;;ENST00000465508.5_1_1:6695737-6697639:-|nuORF;;ENSG00000007923|ENST00000377577|DNAJC11 6.848921140034993 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12866 68.436 334.0 919190.0 25 0 142410.0 + + 37991 SQLPESFRV 9 186 531.7831037149227 1061.5516544966454 2 531.7828246951103 MULTI CID FTMS 0 0 0 12853 373165.53125 0.1987521617359292 -4 0.1763381958007812 13 Unmodified _TNLVEMRTV_ ENSG00000105851|ENST00000496166|PIK3CG 81.89019881105858 0.0170587746866453 4 {[QS]|[NT]}{I|L}PE[YR]AV 9 -1 + 48.812 0.0 0.0 4.5982 4.5982 70.546 0.0 0.0 0.0 36.0482799857328 0.5191598066496539 0.5191598066496539 2.340832060333682 0 1.0 1.3010299956639813 0.2887254899964357 0.6109243748081782 {[QS]|[NT]}{I|L}PE[YR]AV;{[QS]|[NT]}{I|L}PE[YR]G{I|L};{[QS]|[NT]}{I|L}PD[R{M(Oxidation (M))|F}]TV;{[QS]|[NT]}{I|L}P[YR]EAV;{[QS]|[NT]}{I|L}V{[QS]|[NT]}[C(Carbamidomethyl (C))K]{I|L};{[QS]|[NT]}{I|L}PD[R{M(Oxidation (M))|F}]S{I|L};{[QS]|[NT]}{I|L}P[YR]EG{I|L};{[QS]|[NT]}V{M(Oxidation (M))|F}G[KS][NP]V;{[QS]|[NT]}{I|L}V{[QS]|[NT]}[KG]C{I|L};{[QS]|[NT]}{I|L}V{[QS]|[NT]}[KC]AV 4.5982;4.3777;4.2101;4.1488;3.9944;3.9896;3.9283;3.5934;3.5931;3.5475 -;-;-;-;-;-;-;-;-;- 1026 + 1 1.049 237570.5 1.0 8073 4791 12853 HBL1_DMSO_200M_050219_2,12866 HBL1_DMSO_200M_050219_2,12866,TNLVEMRTV False False SQLPESFRV 68.435618 531.78282469511 33053094.0 12853.0 ENSG00000105851|ENST00000496166|PIK3CG 6.25881560643514 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12867 68.442 336.0 719370.0 25 0 92017.0 + 4475 DAYALNHTLSV 11 168 602.3038844794894 1202.5932160257787 2 602.3032714724541 MULTI CID FTMS 0 0 0 12853 353774.90625 0.0440750492920581 -3 0.154449462890625 14 Unmodified _DAYALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 96.0343551737317 0.0004537960096947 4 {[DA]|[EG]}YA{I|L}NHT{I|L}SV 11 0 + 73.619 0.0 0.0 6.1217 6.1217 83.656 0.0 0.0 0.0 7.275071725447404 11.415949303234612 7.275071725447404 7.275071725447404 0 2.079689690656103 1.5228787452803376 1.3807196863200843 0.0 + + {[DA]|[EG]}YA{I|L}NHT{I|L}SV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DA{I|L}NHT{I|L}SV;[HN]T{I|L}AY{I|L}SADV;[HN]T{I|L}AYW{I|L}W;[HN]T{I|L}AY{[DA]|[EG]}{I|L}SV;[HT]N{I|L}AY{I|L}SADV;[HT]N{I|L}AYW{I|L}W;[HN]{I|L}TAY{I|L}SADV;[HN]{I|L}TAYW{I|L}W;[HT]N{I|L}AY{[DA]|[EG]}{I|L}SV 6.1217;5.5168;5.2158;5.1724;5.119;5.104;5.0607;5.0563;5.0129;5.0073 +;-;-;-;-;-;-;-;-;- + 23521 1 1.049 172535.0 1.0 8074 4791 12853 HBL1_DMSO_200M_050219_2,12867 HBL1_DMSO_200M_050219_2,12867,DAYALNHTLSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12868 68.45 417.0 696900.0 25 0 150010.0 + 42317 VSVSLKPV 8 165 414.7618786392324 827.5092043452647 2 414.7625305056572 MULTI CID FTMS 0 0 0 12853 324725.875 0.0943593540894779 -3 0.154449462890625 15 Unmodified _VSVSLKPV_ REV__ENSG00000176601|ENST00000392915|MAP3K19;REV__nc|ENSG00000176601|Q56UN5-3|MAP3K19 5.760428011301431 0.7893668129297577 4 V 1 -1 11.594 0.0 0.0 1.401 0.0 0.0 710.4296583020991 0.0 710.4296583020991 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.401 + + 75 + 1 1.049 224705.2 1.0 8075 4791 12853 HBL1_DMSO_200M_050219_2,12868 HBL1_DMSO_200M_050219_2,12868,VSVSLKPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12869 68.458 410.0 297070.0 25 0 25608.0 -1 0 102 617.3504724291444 616.3431959625443 1 617.3507568240166 MULTI CID FTMS 0 0 0 12853 320440.3125 0.5014049876204811 4 -0.4483108520507812 16 4 [DV]{I|L}TG{I|L} 6 -1 + 71.234 0.0 0.0 11.557 11.557 96.076 0.0 0.0 0.0 7.571297076834611 7.571297076834611 7.571297076834611 11.989700043360187 0 1.586696871556164 1.5228787452803376 0.7742275032520141 0.0 [DV]{I|L}TG{I|L};[DV]T{I|L}G{I|L};[DV]{I|L}TAV;{NN|[MP]|[D{I|L}]|[EV]}VTG{I|L};{[QN]|[E{I|L}]|[KN]}VSG{I|L};[{I|L}V]DTG{I|L};[{I|L}T][DV]G{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}SG{I|L};[{I|L}V]ESG{I|L};{NN|[MP]|[D{I|L}]|[EV]}S{I|L}G{I|L} 11.557;9.6122;8.0917;8.0706;8.0663;7.8521;7.4327;6.771;6.5524;6.1253 -;-;-;-;-;-;-;-;-;- 389 1 1.049 92660.6 1.0 8076 4791 12853 HBL1_DMSO_200M_050219_2,12869 HBL1_DMSO_200M_050219_2,12869, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12870 68.465 413.0 160370.0 25 0 17065.0 -1 YSGQVKCLNI 10 105 591.3018975662229 0 591.3024780154228 PEAK CID FTMS 0 0 0 12853 306463.5 1.0 0 0.0 17 Carbamidomethyl (C) _YSGQVKC(Carbamidomethyl (C))LNI_ ENSG00000137509|ENST00000313010|PRCP;nc|ENSG00000137509|P42785-2|PRCP 6.723162845929126 0.3961065659209837 4 D 1 -1 15.485 0.0 0.0 1.3116 0.0 0.0 977.509177357252 85.03030573062733 1062.5394830878795 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 D 1.3116 - 28 + 1 1.049 53859.6 1.0 8077 4791 12853 HBL1_DMSO_200M_050219_2,12870 HBL1_DMSO_200M_050219_2,12870,YSGQVKCLNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12871 68.472 416.0 540840.0 25 0 55786.0 + 13982 HYYDSTIEL 9 184 570.7639078867431 1139.5132628402862 2 570.7639037966728 MULTI CID FTMS 0 0 0 12853 296809.15625 0.1035550800608192 -5 0.2271194458007812 18 Unmodified _HYYDSTIEL_ ENSG00000100453|ENST00000216341|GZMB;ENST00000526004.1_1_14:25101006-25102204:-|nuORF 77.98433622928108 0.0180125044636492 4 {[WN]|[YH]}YDST{I|L}E{I|L} 9 0 + 72.819 0.0 0.0 6.3904 6.3904 91.138 0.0 0.0 0.0 19.366130211356065 54.82086710732426 19.366130211356065 23.010299956639805 0 0.7302046884880937 1.2218487496163564 1.424742501084005 0.0 + + {[WN]|[YH]}YDST{I|L}E{I|L};[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))G]|[NC]}DST{I|L}E{I|L};{[WN]|[YH]}YD[WP]{M(Oxidation (M))|F}{I|L};[NP][HD]DST{I|L}E{I|L};{[WN]|[YH]}E{I|L}CC{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{[WN]|[YH]}CC{I|L}{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM}[EP]{I|L}{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}YD{I|L}[WM]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P[MD]YE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}P{I|L}E{I|L} 6.3904;4.3711;4.3092;3.5831;3.5764;3.4002;3.1403;3.1099;3.0558;2.7641 +;-;-;-;-;-;-;-;-;- + 1957 1 1.049 168746.0 1.0 8078 4791 12853 HBL1_DMSO_200M_050219_2,12871 HBL1_DMSO_200M_050219_2,12871,HYYDSTIEL True True HYYDSTIEL 68.472477 570.763903796673 112848696.0 12853.0 ENST00000526004.1_1_14:25101006-25102204:-|nuORF;;ENSG00000100453|ENST00000216341|GZMB 6.665723005930583 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12872 68.48 418.0 460690.0 25 0 245740.0 -1 0 100 609.1814440194112 608.1741675528111 1 609.1810180544853 MULTI CID FTMS 0 0 0 12853 292501.71875 0.8263128055838642 -1 0.0631256103515625 19 4 Y 1 -1 10.969 0.0 0.0 1.8036 0.0 0.0 427.0993059578877 0.0 427.0993059578877 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.8036 - 56 + 1 1.049 140332.1 1.0 8079 4791 12853 HBL1_DMSO_200M_050219_2,12872 HBL1_DMSO_200M_050219_2,12872, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12873 68.489 442.0 425130.0 25 0 36683.0 + 26098 NPIQTMTEV 9 195 516.7546522197954 1031.494751506391 2 516.7541381716728 MULTI CID FTMS 0 0 0 12853 229187.578125 0.8592852867187042 3 -0.307373046875 20 Unmodified _NPIQTMTEV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 65.23502041540118 0.0231836506122253 4 QQTMTPM 7 5 51.519 0.0 0.0 4.9946 0.0 0.0 196.12184340644689 0.0 196.12184340644689 0.0 28.208355904882147 0.0 0.0 0 0.1203715150305281 0.0 1.1861818737241734 1.5044321917401078 QQTMTPM 4.9946 - 5696 1 1.049 144082.8 1.0 8080 4791 12853 HBL1_DMSO_200M_050219_2,12873 HBL1_DMSO_200M_050219_2,12873,NPIQTMTEV True True NPIQTMTEV 68.488985 516.754138171673 6020021.5 12853.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 5.199836254119873 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12875 68.493 16.0 3982900.0 25 0 259870.0 37109 TGTTHTATTV 10 102 495.2493582655393 988.4841635978786 2 495.2492553591728 MULTI CID FTMS 0 0 0 12874 3563235.5 0.3714736186197003 3 -0.345306396484375 1 Unmodified _TGTTHTATTV_ ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-2|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1 29.081581746732265 0.3152867722954398 4 TGY{I|L} 4 8 52.251 0.0 0.0 5.2859 0.0 0.0 0.0 551.2464083307249 551.2464083307249 24.06295947543775 0.0 0.0 0.0 0 0.7302046884880937 1.3010299956639813 0.0 0.0 TGY{I|L} 5.2859 - 449 + 1 1.036 52516.1 1.0 8081 4792 12874 HBL1_DMSO_200M_050219_2,12875 HBL1_DMSO_200M_050219_2,12875,TGTTHTATTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12876 68.494 14.0 4544600.0 25 0 834160.0 36188 SVVSEQEAYL 10 62 562.7749756524464 1123.5353983716927 2 562.7755615115166 MULTI CID FTMS 0 0 0 12874 4273466.5 1.0 0 0.0 2 Unmodified _SVVSEQEAYL_ ENSG00000144406|ENST00000673920|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;nc|ENSG00000144406|Q8N2C7-5|UNC80;nc|ENSG00000144406|Q8N2C7-6|UNC80;nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80 20.41453444215458 0.5050059513928961 4 [VS]VD{I|L}TR 7 7 67.039 0.0 0.0 5.9668 0.0 0.0 0.0 350.08555017642817 350.08555017642817 56.581079205375744 0.0 0.0 0.0 0 0.5 2.0 0.3807196863200844 0.3494850021680094 [VS]VD{I|L}TR 5.9668 - 94 + 1 1.036 56895.3 1.0 8082 4792 12874 HBL1_DMSO_200M_050219_2,12876 HBL1_DMSO_200M_050219_2,12876,SVVSEQEAYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12877 68.496 13.0 4477800.0 25 0 326020.0 + 41415 VPLDKQITI 9 78 513.8132768777444 1025.6120008222888 2 513.8137084841728 MULTI CID FTMS 0 0 0 12874 4724719.0 0.4195197035040192 -2 0.1661300659179687 3 Unmodified _VPLDKQITI_ ENSG00000163938|ENST00000418458|GNL3;nc|ENSG00000163938|Q9BVP2-2|GNL3 53.832793166522166 0.0319663582346103 4 [VP]EKQV{I|L}T{I|L} 9 3 + 50.799 0.0 0.0 4.953 4.953 67.823 0.0 0.0 0.0 6.814178132293449 7.728787452803374 6.814178132293449 0.2422750325201406 0 1.1677353201839438 1.6989700043360187 0.7059771852360797 0.0 [VP]EKQV{I|L}T{I|L};[VP]EKQ{I|L}VT{I|L};[VP]EKQVT{I|L}{I|L};[VP]EKQ{I|L}S{I|L}{I|L};[{I|L}P]DKQV{I|L}T{I|L};[{I|L}P]DKQ{I|L}VT{I|L};[VP]EK[AG]V{I|L}T{I|L};[VP]EK[AG]{I|L}VT{I|L};[{I|L}P]DKQVT{I|L}{I|L};[{I|L}P]DKQ{I|L}S{I|L}{I|L} 4.953;4.9294;4.3883;4.3647;4.1509;4.1272;4.0552;4.0316;3.5862;3.5625 -;-;-;-;-;-;-;-;-;- 308 1 1.036 53027.1 1.0 8083 4792 12874 HBL1_DMSO_200M_050219_2,12877 HBL1_DMSO_200M_050219_2,12877,VPLDKQITI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12878 68.497 32.0 1508600.0 25 0 107780.0 -1 DPTPEMDSL 9 98 510.71496761258777 1019.4153822919756 2 510.7148925662041 MULTI CID FTMS 0 0 0 12874 1885334.25 0.3394605604607563 10 -1.0755081176757812 4 Oxidation (M) _DPTPEM(Oxidation (M))DSL_ ENSG00000174788|ENST00000311069|PCP2;nc|ENSG00000174788|Q8IVA1-2|PCP2 7.289230182591677 0.6602208344931196 4 CTV 3 -1 12.873 0.0 0.0 1.2628 0.0 0.0 698.281881170685 0.0 698.281881170685 0.0 8.268704686059698 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 CTV 1.2628 - 96 + 1 1.036 43859.5 1.0 8084 4792 12874 HBL1_DMSO_200M_050219_2,12878 HBL1_DMSO_200M_050219_2,12878,DPTPEMDSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12879 68.498 51.0 1337600.0 25 0 131460.0 -1 0 64 986.483511414154 1970.952469895108 2 986.4832031130792 MULTI CID FTMS 0 0 0 12874 1019109.1875 0.2823343857866101 3 -0.345306396484375 5 4 VTN{I|L} 4 -1 28.448 0.0 0.0 1.4434 0.0 0.0 1222.5762014398329 318.11029993228755 1540.6865013721203 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.8807196863200843 VTN{I|L} 1.4434 - 214 + 1 1.036 50084.1 1.0 8085 4792 12874 HBL1_DMSO_200M_050219_2,12879 HBL1_DMSO_200M_050219_2,12879, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12880 68.505 402.0 454640.0 25 0 171700.0 -1 0 68 1187.8061254223162 3560.396546867149 3 1188.141528308392 MULTI CID FTMS 0 0 0 12874 775458.125 0.4666810199140776 -1 0.1030044555664062 6 4 Y{[CT]|[{M(Oxidation (M))|F}G]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}Y 6 -1 12.396 0.0 0.0 0.34816 0.0 0.0 1019.3601221618736 1700.713529275772 2720.0736514376454 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{[CT]|[{M(Oxidation (M))|F}G]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}Y 0.34816 - 107 + 1 1.036 147634.7 1.0 8086 4792 12874 HBL1_DMSO_200M_050219_2,12880 HBL1_DMSO_200M_050219_2,12880, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12881 68.509 192.0 707870.0 25 0 26431.0 -1 RCHRRRRRCCC 11 121 866.9066694051579 1731.7987858771155 2 867.4047119021416 MULTI CID FTMS 0 0 0 12874 663504.1875 0.049451504478929 20 -2.07794189453125 7 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 4 [NP]{I|L}NM[RH]DAD{I|L}NP[EP] 15 -1 + 76.581 0.0 0.0 4.4221 4.4221 73.809 0.0 0.0 0.0 14.691220042668242 7.61760834195475 7.61760834195475 4.677732462951482 0 0.4247425010840047 1.154901959985743 0.805462187404089 0.2887254899964357 [NP]{I|L}NM[RH]DAD{I|L}NP[EP];[NP]{I|L}[VS][HS]QDAD{I|L}NP[EP];[NP]{I|L}[VS][HS]QWNNNP[EP];[NP]{I|L}GGM[RH]DAD{I|L}NP[EP];[NP]{I|L}NM[RH]DAD{I|L}GGP[EP];[NP]{I|L}[VS][HS]QDAN{I|L}DP[EP];[NP]{I|L}N[HS]{[TV]|[{I|L}S]}DAD{I|L}NP[EP];[NP]{I|L}NM[RH]DAN{I|L}DP[EP];[NP]{I|L}[VS][HS]QDANNNV[HS];[NP]{I|L}DW[PS][PA]AD{I|L}NP[EP] 4.4221;4.152;3.9524;3.9006;3.9006;3.8183;3.6594;3.6553;3.6452;3.6215 -;-;-;-;-;-;-;-;-;- 9717 1 1.036 91702.1 1.0 8087 4792 12874 HBL1_DMSO_200M_050219_2,12881 HBL1_DMSO_200M_050219_2,12881,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12882 68.516 397.0 650670.0 25 0 51870.0 + 35939 SVPESPEFVRV 11 119 623.3271804643133 1244.6398079954265 2 623.3278686404228 MULTI CID FTMS 0 0 0 12874 514576.4375 0.2390595125629296 -3 0.2226715087890625 8 Unmodified _SVPESPEFVRV_ ENSG00000084090|ENST00000337288|STARD7 69.33821966488729 0.0343223916712224 4 [VS]PESPE{M(Oxidation (M))|F}VRV 11 0 + 88.778 0.0 0.0 7.1328 7.1328 78.715 0.0 0.0 0.0 52.84346738743199 1.0723859047056266 1.0723859047056266 1.411973101890382 0 0.6549471895720984 2.0 1.1989700043360187 1.086696871556164 + + [VS]PESPE{M(Oxidation (M))|F}VRV;[VS]PEVEVTGVMV;[VS]PEVEVEKMV;[VS]PESV{[QN]|[E{I|L}]|[KN]}GVMV;[VS]PESV{[QN]|[E{I|L}]|[KN]}WTV;[VS]PEVS{[QN]|[E{I|L}]|[KN]}GVMV;[VS]PESV{[QN]|[E{I|L}]|[KN]}WS{I|L};[VS]A{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}VSEP[PA];[VS]PEVS{[QN]|[E{I|L}]|[KN]}WTV;[VS]A{M(Oxidation (M))|F}TVEVE[HK] 7.1328;7.0194;6.9995;6.6412;6.5713;6.4439;6.4238;6.4097;6.374;6.3171 +;-;-;-;-;-;-;-;-;- + 3571 + 1 1.036 188940.7 1.0 8088 4792 12874 HBL1_DMSO_200M_050219_2,12882 HBL1_DMSO_200M_050219_2,12882,SVPESPEFVRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12883 68.52 182.0 845620.0 25 0 159650.0 -1 0 117 901.9193723137696 1801.824191694339 2 901.9202758669852 MULTI CID FTMS 0 0 0 12874 471936.28125 1.0 0 0.0 9 4 [NP]{I|L}NETT[YN]AN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]} 16 -1 + 61.764 0.0 0.0 3.4279 3.4279 73.942 0.0 0.0 0.0 3.10525350536075 42.03456245146484 3.10525350536075 7.811603720184188 0 0.0 1.0457574905606752 1.110924374808178 0.0 [NP]{I|L}NETT[YN]AN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP][VS]P{I|L}Y[{M(Oxidation (M))|F}E]AN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[{I|L}P]NNETT[YN]AN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}GGETT[YN]AN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NETT[YN]AGG{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NETT[YN]AN{I|L}GGP{NN|[MP]|[D{I|L}]|[EV]};[PG]G{I|L}NETT[YN]AN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NETT[YN]AN{I|L}[HS]{[QS]|[NT]};[PG]DKP{I|L}Y[{M(Oxidation (M))|F}E]AN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[PG][TP]AA{I|L}Y[{M(Oxidation (M))|F}E]AN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]} 3.4279;2.9943;2.9872;2.9276;2.9276;2.9276;2.8329;2.8176;2.8019;2.7777 -;-;-;-;-;-;-;-;-;- 6718 1 1.036 103329.1 1.0 8089 4792 12874 HBL1_DMSO_200M_050219_2,12883 HBL1_DMSO_200M_050219_2,12883, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12884 68.528 483.0 536060.0 25 0 23805.0 -1 0 166 873.9146114817958 1745.8146700303914 2 873.9200317263603 MULTI CID FTMS 0 0 0 12874 404468.28125 0.0469734181898125 14 -1.47998046875 10 4 [MN]PN{I|L}DQAQRDG{M(Oxidation (M))|F}{I|L}Q 15 -1 + 112.47 0.0 0.0 6.4424 6.4424 85.397 0.0 0.0 0.0 22.846395794758124 15.140143618001218 15.140143618001218 7.934079904110959 0 1.3692803136799157 1.5228787452803376 1.587180496500464 1.7658715643802767 [MN]PN{I|L}DQAQRDG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}DQAQR{M(Oxidation (M))|F}{[RE]|[WV]}Q;[MN]PN{I|L}DQA[AG]RDG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}D[AG]AQRDG{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}DQAQRDG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}DQAQP[KC]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}DQAQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{I|L}Q;[MN]PN{I|L}QDAQRDG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}DQAQ[{I|L}V]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[MN]PN{I|L}DQA[AG]R{M(Oxidation (M))|F}{[RE]|[WV]}Q 6.4424;5.9879;5.9251;5.9251;5.9251;5.8069;5.7881;5.7042;5.4854;5.4695 -;-;-;-;-;-;-;-;-;- 136173 + 1 1.036 170570.9 1.0 8090 4792 12874 HBL1_DMSO_200M_050219_2,12884 HBL1_DMSO_200M_050219_2,12884, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12885 68.532 171.0 419170.0 25 0 39805.0 42584 VTQWKGTVL 9 117 516.296685824842 0 516.2960082888603 PEAK CID FTMS 0 0 0 12874 346352.3125 0.267615668296322 -7 0.3455734252929687 11 Unmodified _VTQWKGTVL_ ENSG00000106723|ENST00000375859|SPIN1 10.823927491677226 0.3028200641087142 4 GTQ{I|L} 4 6 15.807 0.0 0.0 1.5338 0.0 0.0 420.2582753588652 208.0732821100219 628.3315574688871 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3054621874040891 0.0 GTQ{I|L} 1.5338 - 165 + 1 1.036 61239.4 1.0 8091 4792 12874 HBL1_DMSO_200M_050219_2,12885 HBL1_DMSO_200M_050219_2,12885,VTQWKGTVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12886 68.534 95.0 630150.0 25 0 47806.0 + 21294 LPEITVRSV 9 102 507.30346369476734 1012.5923744563348 2 507.3036682009697 MULTI CID FTMS 0 0 0 12874 277907.5625 0.8040413260642965 1 -0.142181396484375 12 Unmodified _LPEITVRSV_ ENSG00000156253|ENST00000493196|RWDD2B;ENST00000472184.1_1_21:30378740-30380682:-|nuORF 24.99096001346401 0.2132109383330889 4 {I|L}PE{I|L}T 5 4 57.237 0.0 0.0 5.6525 0.0 0.0 0.0 456.26035486392817 456.26035486392817 31.87022187087372 0.0 0.0 0.0 0 0.7059771852360797 1.5228787452803376 0.0 0.0 + {I|L}PE{I|L}T 5.6525 + + 359 + 1 1.036 53629.0 1.0 8092 4792 12874 HBL1_DMSO_200M_050219_2,12886 HBL1_DMSO_200M_050219_2,12886,LPEITVRSV False True LPEITVRSV 68.53367 507.30366820097 6439807.0 12874.0 ENST00000472184.1_1_21:30378740-30380682:-|nuORF;;ENSG00000156253|ENST00000493196|RWDD2B 4.246069669723511 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12887 68.543 528.0 230470.0 25 0 20798.0 + 19373 LERCCFYF 8 179 540.7360127413141 1079.457472549428 2 541.2356445193291 MULTI CID FTMS 0 0 0 12874 278357.9375 0.5751894131281277 13 -1.3315582275390625 13 Unmodified _LERCCFYF_ REV__ENSG00000160505|ENST00000301295|NLRP4;REV__nc|ENSG00000160505|Q96MN2-2|NLRP4;REV__nc|ENSG00000160505|Q96MN2-3|NLRP4 10.183394434864962 0.7604730176254005 4 {[DA]|[EG]}E{I|L}{I|L} 5 -1 19.208 0.0 0.0 1.7794 0.0 0.0 0.0 535.163990453978 535.163990453978 5.713337517843655 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {[DA]|[EG]}E{I|L}{I|L} 1.7794 - 1505 1 1.036 98580.0 1.0 8093 4792 12874 HBL1_DMSO_200M_050219_2,12887 HBL1_DMSO_200M_050219_2,12887,LERCCFYF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12888 68.555 609.0 121600.0 25 0 10679.0 -1 LPYMIQCKHF 10 111 648.3160454897776 1294.617538046355 2 648.3160888552666 MULTI CID FTMS 0 0 0 12874 184386.015625 0.4591449597455088 3 -0.345306396484375 14 Oxidation (M) _LPYM(Oxidation (M))IQCKHF_ ENSG00000178597|ENST00000319098|PSAPL1 20.453626601364224 0.5043500229302764 4 {I|L}PYP{I|L} 5 -1 61.186 0.0 0.0 4.7262 0.0 0.0 0.0 708.2595919244749 708.2595919244749 47.69077524932108 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 {I|L}PYP{I|L} 4.7262 - 367 + 1 1.036 62219.2 1.0 8094 4792 12874 HBL1_DMSO_200M_050219_2,12888 HBL1_DMSO_200M_050219_2,12888,LPYMIQCKHF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12889 68.567 704.0 221800.0 25 0 15755.0 -1 FRYILNCMA 9 199 382.8527573957312 1145.5364427873935 3 382.8529235720634 MULTI CID FTMS 0 0 0 12874 182322.578125 0.5730913326839181 3 -0.345306396484375 15 Oxidation (M) _FRYILNCM(Oxidation (M))A_ ENSG00000186976|ENST00000262726|EFCAB6;nc|ENSG00000186976|Q5THR3-2|EFCAB6;nc|ENSG00000186976|Q5THR3-5|EFCAB6 7.608950283845883 0.6490595679007971 4 V 1 -1 12.764 0.0 0.0 1.1143 0.0 0.0 1028.4567594151265 0.0 1028.4567594151265 0.0 1.5220003430038869 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1143 - 154 + 1 1.036 124881.8 1.0 8095 4792 12874 HBL1_DMSO_200M_050219_2,12889 HBL1_DMSO_200M_050219_2,12889,FRYILNCMA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12890 68.58 727.0 231230.0 25 0 28083.0 -1 0 192 396.8018461708991 791.5891394085982 2 396.8015624880791 MULTI CID FTMS 0 0 0 12874 164489.5625 0.6971572219753556 2 -0.2043685913085937 16 4 {I|L}{I|L}{I|L} 3 -1 32.932 0.0 0.0 4.1602 0.0 0.0 0.0 449.3129061334594 449.3129061334594 12.397868585481078 0.0 0.0 0.0 0 1.1505149978319906 0.0 0.0 0.0 {I|L}{I|L}{I|L} 4.1602 - 70 + 1 1.036 133798.6 1.0 8096 4792 12874 HBL1_DMSO_200M_050219_2,12890 HBL1_DMSO_200M_050219_2,12890, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12891 68.591 592.0 81505.0 25 0 4661.4 -1 0 88 716.026146493266 0 716.0255615115166 PEAK CID FTMS 0 0 0 12874 139055.546875 1.0 0 0.0 17 4 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.38352 0.0 0.0 914.7599823402444 365.1849459283813 1279.9449282686255 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.38352 - 35 + 1 1.036 47806.1 1.0 8097 4792 12874 HBL1_DMSO_200M_050219_2,12891 HBL1_DMSO_200M_050219_2,12891, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12892 68.605 800.0 422000.0 25 0 38197.0 -1 EWDGPMAVT 9 288 341.1479597789147 1020.4220499369442 3 341.1479369997978 MULTI CID FTMS 0 0 0 12874 143286.828125 0.2187674297416507 3 -0.345306396484375 18 Oxidation (M) _EWDGPM(Oxidation (M))AVT_ ENSG00000116147|ENST00000367674|TNR;nc|ENSG00000116147|Q92752-2|TNR 2.498486711656943 0.8274632594916526 4 {M(Oxidation (M))|F} 1 -1 11.99 0.0 0.0 1.175 0.0 0.0 855.3420919064739 0.0 855.3420919064739 0.0 -7.93182501400722 -7.93182501400722 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.175 + + 54 + 1 1.036 264895.1 0.959999978542328 8098 4792 12874 HBL1_DMSO_200M_050219_2,12892 HBL1_DMSO_200M_050219_2,12892,EWDGPMAVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12893 68.616 644.0 105440.0 25 0 16689.0 + 45931 YYYDGDVGNYY 11 112 696.2760476580993 0 696.2756225466728 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _YYYDGDVGNYY_ ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF 10.073929032068715 0.4495801685015257 4 Y 1 10 6.9897 0.0 0.0 0.50266 0.0 0.0 1092.4049262714734 132.04615198306877 1224.4510782545422 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.50266 + + 17 + 1 1.036 56646.0 1.0 8099 4792 12874 HBL1_DMSO_200M_050219_2,12893 HBL1_DMSO_200M_050219_2,12893,YYYDGDVGNYY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12894 68.631 800.0 283160.0 25 0 28585.0 -1 0 209 365.72168883833166 729.4288247434633 2 365.7208434939384 MULTI CID FTMS 0 0 0 12874 112191.7421875 1.0 0 0.0 20 4 [{I|L}V]GS{I|L}E{I|L} 7 -1 + 43.035 0.0 0.0 5.8999 5.8999 72.559 0.0 0.0 0.0 5.456483560400784 16.320232147054057 5.456483560400784 0.5237875363565792 0 0.4247425010840047 1.6989700043360187 0.3252574989159953 0.0 [{I|L}V]GS{I|L}E{I|L};[{I|L}V]GSE{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{I|L}{I|L};{[TV]|[{I|L}S]}[VG]{I|L}E{I|L};{[TV]|[{I|L}S]}[VG]E{I|L}{I|L};{[TV]|[{I|L}S]}[R{I|L}]E{I|L};[K{I|L}]D{I|L}E{I|L};[K{I|L}]DE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L} 5.8999;5.8281;5.1518;5.08;3.997;3.9252;3.51;3.5071;3.4353;3.1865 -;-;-;-;-;-;-;-;-;- 274 1 1.036 178474.9 0.9100000262260436 8100 4792 12874 HBL1_DMSO_200M_050219_2,12894 HBL1_DMSO_200M_050219_2,12894, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12896 68.635 0.83 27081000.0 25 0 3200500.0 + 23295 LSYSQAVTV 9 50 484.2583831501523 966.5022133671048 2 484.2591735720634 MULTI CID FTMS 0 0 0 12895 33292244.0 0.0947244264360222 11 -1.1072998046875 1 Unmodified _LSYSQAVTV_ REV__ENSG00000115145|ENST00000263904|STAM2 10.823927491677226 0.5436922275383211 4 CTV 3 -1 25.674 0.0 0.0 2.6564 0.0 0.0 645.368681728236 0.0 645.368681728236 0.0 18.68440000316717 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 CTV 2.6564 - 21 + 1 1.033 23913.7 1.0 8101 4793 12895 HBL1_DMSO_200M_050219_2,12896 HBL1_DMSO_200M_050219_2,12896,LSYSQAVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12897 68.637 5.6 9013700.0 25 0 1279100.0 22458 LPVAQVIF 8 69 443.773538906193 885.532524879186 2 443.7736694216728 MULTI CID FTMS 0 0 0 12895 7798947.0 0.4551203576561872 17 -1.7668914794921875 2 Unmodified _LPVAQVIF_ ENST00000254322.2_1_19:14625909-14626227:-|nuORF 19.438996006549623 0.6237395211498085 4 {I|L}P 2 6 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3745354929466 672.3745354929466 18.8290875765496 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 129 + 1 1.033 45270.7 1.0 8102 4793 12895 HBL1_DMSO_200M_050219_2,12897 HBL1_DMSO_200M_050219_2,12897,LPVAQVIF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12898 68.638 7.0 7011700.0 25 0 952780.0 + 21228 LPDGRTLIV 9 65 492.2989127937813 982.5832726543626 2 492.2983581423759 MULTI CID FTMS 0 0 0 12895 5624693.5 0.7588817615327306 -2 0.2451858520507812 3 Unmodified _LPDGRTLIV_ ENSG00000106829|ENST00000376552|TLE4;ENSG00000140332|ENST00000451782|TLE3;ENST00000462803.5_1_9:82286241-82340056:+|nuORF;ENST00000557815.1_1_15:70346775-70346994:-|nuORF;nc|ENSG00000106829|Q04727-2|TLE4;nc|ENSG00000106829|Q04727-3|TLE4;nc|ENSG00000106829|Q04727-4|TLE4;nc|ENSG00000140332|Q04726-2|TLE3;nc|ENSG00000140332|Q04726-3|TLE3;nc|ENSG00000140332|Q04726-4|TLE3;nc|ENSG00000140332|Q04726-6|TLE3;nc|ENSG00000140332|Q04726-7|TLE3;nc|ENSG00000140332|Q04726|TLE3 29.84058131909904 0.1515068451768857 4 {I|L}PD 3 6 42.976 0.0 0.0 4.3738 0.0 0.0 0.0 654.3932725037122 654.3932725037122 12.04628427264403 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 + {I|L}PD 4.3738 + + 21 + 1 1.033 43514.4 1.0 8103 4793 12895 HBL1_DMSO_200M_050219_2,12898 HBL1_DMSO_200M_050219_2,12898,LPDGRTLIV False True LPDGRTLIV 68.637732 492.298358142376 242694168.0 12895.0 ENSG00000106829|ENST00000376552|TLE4;;nc|ENSG00000140332|Q04726-7|TLE3;;nc|ENSG00000140332|Q04726-6|TLE3;;nc|ENSG00000106829|Q04727-2|TLE4;;nc|ENSG00000140332|Q04726-2|TLE3;;nc|ENSG00000140332|Q04726-4|TLE3;;ENST00000462803.5_1_9:82286241-82340056:+|nuORF;;nc|ENSG00000106829|Q04727-4|TLE4;;nc|ENSG00000140332|Q04726-3|TLE3;;nc|ENSG00000140332|Q04726|TLE3;;ENSG00000140332|ENST00000451782|TLE3;;ENST00000557815.1_1_15:70346775-70346994:-|nuORF;;nc|ENSG00000106829|Q04727-3|TLE4 4.073342561721802 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12899 68.639 7.6 5696100.0 25 0 1378200.0 + 6281 DVANKIGII 9 64 471.7852107057819 941.5558684783638 2 471.7848388552666 MULTI CID FTMS 0 0 0 12895 5468313.5 1.0 0 0.0 4 Unmodified _DVANKIGII_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF;ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 27.628801355627647 0.1796483985696185 4 [DV]AN 4 5 44.425 0.0 0.0 4.7182 0.0 0.0 0.0 539.3539522760374 539.3539522760374 9.613722171227856 0.0 0.0 0.0 0 1.1237125054200234 2.0 0.0 0.0 + [DV]AN 4.7182 + + 245 + 1 1.033 39041.8 1.0 8104 4793 12895 HBL1_DMSO_200M_050219_2,12899 HBL1_DMSO_200M_050219_2,12899,DVANKIGII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12900 68.64 9.5 3563800.0 25 0 323170.0 -1 VGPLMRVL 8 56 450.7700398607845 899.5255267883689 2 450.7702819705009 MULTI CID FTMS 0 0 0 12895 4226735.5 1.0 0 0.0 5 Oxidation (M) _VGPLM(Oxidation (M))RVL_ ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2 10.183394434864962 0.7604730176254005 4 V{I|L} 2 -1 20.701 0.0 0.0 2.3013 0.0 0.0 669.3623930987189 0.0 669.3623930987189 0.0 7.513487579716767 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{I|L} 2.3013 + + 28 + 1 1.033 32699.4 1.0 8105 4793 12895 HBL1_DMSO_200M_050219_2,12900 HBL1_DMSO_200M_050219_2,12900,VGPLMRVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12901 68.641 13.0 3715000.0 25 0 479870.0 + 21946 LPPLHLLR 8 59 320.2117583217455 957.6134455654365 3 320.2113525271416 MULTI CID FTMS 0 0 0 12895 3133902.5 0.4136615652099536 23 -2.2831039428710938 6 Unmodified _LPPLHLLR_ REV__ENST00000295522.3_1_3:190039874-190040219:-|nuORF 17.11289562659939 0.6581031263288403 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 -1 + 59.385 0.0 0.0 6.2014 6.2014 78.402 0.0 0.0 0.0 53.90092514408778 3.4948500216800937 3.4948500216800937 3.0102999566398125 0 0.0 1.5228787452803376 0.0 0.0 {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}{I|L}{[HG]|PP}H{I|L}[R{I|L}] 6.2014;5.887;2.3387 -;+;- + 61 + 1 1.033 47323.2 1.0 8106 4793 12895 HBL1_DMSO_200M_050219_2,12901 HBL1_DMSO_200M_050219_2,12901,LPPLHLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12902 68.642 14.0 3356000.0 25 0 587810.0 + 36186 SVVRGMEPSY 10 66 375.51923291378176 1123.535869341545 3 375.5193359255791 MULTI CID FTMS 0 0 0 12895 3076878.0 0.8035325495816477 1 -0.0621871948242187 7 Unmodified _SVVRGMEPSY_ REV__ENSG00000172289|ENST00000307552|OR10V1 13.90604991867851 0.6142120002215601 4 [VS]VD 4 -1 40.222 0.0 0.0 3.5799 0.0 0.0 0.0 720.3169416894547 720.3169416894547 24.02372200412145 0.0 0.0 0.0 0 1.0 2.0 0.3054621874040891 0.0 [VS]VD 3.5799 - 58 1 1.033 45893.5 1.0 8107 4793 12895 HBL1_DMSO_200M_050219_2,12902 HBL1_DMSO_200M_050219_2,12902,SVVRGMEPSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12903 68.644 17.0 1658100.0 25 0 179760.0 + -1 CFPLWLVL 8 58 524.2892109007882 1046.5638688683764 2 524.2892333865166 MULTI CID FTMS 0 0 0 12895 1719613.625 0.7853206238079825 -2 0.2451858520507812 8 Carbamidomethyl (C) _C(Carbamidomethyl (C))FPLWLVL_ REV__ENSG00000176547|ENST00000319856|OR4C3 17.086550045450526 0.6584923310065985 4 Y{I|L}V{I|L} 4 -1 36.938 0.0 0.0 3.5295 0.0 0.0 540.2562472668438 0.0 540.2562472668438 0.0 22.33410649039925 0.0 0.0 0 0.5 0.0 0.0 0.0 Y{I|L}V{I|L} 3.5295 - 16 1 1.033 30038.1 1.0 8108 4793 12895 HBL1_DMSO_200M_050219_2,12903 HBL1_DMSO_200M_050219_2,12903,CFPLWLVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12904 68.645 26.0 1126300.0 25 0 67842.0 + 15592 IPYPLSENNQV 11 66 637.3246690404161 1272.634785147632 2 637.3246948122978 MULTI CID FTMS 0 0 0 12895 1726792.25 0.2050192482451351 7 -0.7008590698242188 9 Unmodified _IPYPLSENNQV_ ENSG00000104549|ENST00000265896|SQLE 43.85829265575387 0.1529608345840953 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SEN 8 5 66.296 0.0 0.0 5.2094 0.0 0.0 0.0 356.15631301684874 356.15631301684874 47.25538335112488 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.16944517631652 0.4247425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SEN 5.2094 - 179 1 1.033 29234.8 1.0 8109 4793 12895 HBL1_DMSO_200M_050219_2,12904 HBL1_DMSO_200M_050219_2,12904,IPYPLSENNQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12905 68.646 24.0 1953800.0 25 0 234570.0 + 25250 MVPEDVPRL 9 67 528.2802041516114 1054.5458553700228 2 528.2815429568291 MULTI CID FTMS 0 0 0 12895 1591189.75 0.7961737928691399 -3 0.3083114624023437 10 Unmodified _MVPEDVPRL_ ENSG00000272333|ENST00000420124|KMT2B 22.736283301280096 0.2418982879461534 4 {[ET]|[MV]}PEDV[RP]{I|L} 9 0 + 32.641 0.0 0.0 3.0953 3.0953 79.719 0.0 0.0 0.0 8.740531936587466 2.23538195826756 2.23538195826756 32.641457080675245 0 0.3494850021680094 0.0 0.0 0.3494850021680094 + + {[ET]|[MV]}PEDV[RP]{I|L} 3.0953 + + 38 + 1 1.033 44795.3 1.0 8110 4793 12895 HBL1_DMSO_200M_050219_2,12905 HBL1_DMSO_200M_050219_2,12905,MVPEDVPRL False True MVPEDVPRL 68.645984 528.281542956829 44105548.0 12895.0 ENSG00000272333|ENST00000420124|KMT2B 7.293341000874837 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12906 68.647 24.0 1537400.0 25 0 197720.0 + 17863 KQLEEAIQL 9 65 536.3056882786437 1070.5968236240874 2 536.3057128787041 MULTI CID FTMS 0 0 0 12895 1509922.375 0.7900395870732152 3 -0.292999267578125 11 Unmodified _KQLEEAIQL_ ENSG00000119397|ENST00000373855|CNTRL;ENST00000373851.6_1_9:123874787-123912836:+|nuORF;nc|ENSG00000119397|Q7Z7A1-5|CNTRL 29.081581746732265 0.1611639662936252 4 {[QN]|[E{I|L}]|[KN]}[RH]Y{I|L}Q{I|L} 8 5 + 24.13 0.0 0.0 2.2539 2.2539 77.88 0.0 0.0 0.0 1.6946999598069823 10.150312510170778 1.6946999598069823 24.12971259689116 0 0.6237125054200234 0.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[RH]Y{I|L}Q{I|L} 2.2539 - 46 1 1.033 34323.6 1.0 8111 4793 12895 HBL1_DMSO_200M_050219_2,12906 HBL1_DMSO_200M_050219_2,12906,KQLEEAIQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12907 68.649 75.0 643710.0 25 0 126390.0 -1 VLKILLDEM 9 71 545.3170514919698 1088.6195500507397 2 545.3173705935478 MULTI CID FTMS 0 0 0 12895 725099.3125 0.7714861722729405 -1 0.142181396484375 12 Oxidation (M) _VLKILLDEM(Oxidation (M))_ ENSG00000135828|ENST00000367559|RNASEL;nc|ENSG00000135828|Q05823-2|RNASEL 3.944395688203298 0.7769873103969335 4 [{I|L}V]W 3 -1 21.427 0.0 0.0 1.9682 0.0 0.0 0.0 687.3617037408811 687.3617037408811 10.589219599218492 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [{I|L}V]W 1.9682 - 13 + 1 1.033 44504.3 1.0 8112 4793 12895 HBL1_DMSO_200M_050219_2,12907 HBL1_DMSO_200M_050219_2,12907,VLKILLDEM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12908 68.65 37.0 1132600.0 25 0 103030.0 + 21916 LPPHIIRL 8 70 479.8140515051801 957.6135500771602 2 479.8139221072197 MULTI CID FTMS 0 0 0 12895 643199.6875 0.2921241185206077 11 -1.1072998046875 13 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 24.020572477871973 0.5389365498350341 4 {I|L}PPH{I|L}[R{I|L}]{I|L} 8 0 + 69.373 0.0 0.0 7.2444 7.2444 95.645 0.0 0.0 0.0 55.39381281052492 7.166987712964499 7.166987712964499 69.3732128972453 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPH{I|L}[R{I|L}]{I|L} 7.2444 + + 40 + 1 1.033 40342.6 1.0 8113 4793 12895 HBL1_DMSO_200M_050219_2,12908 HBL1_DMSO_200M_050219_2,12908,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12909 68.652 57.0 710230.0 25 0 232840.0 40635 VLDKILPL 8 54 455.8006824941039 909.5868120550078 2 455.8008605837822 MULTI CID FTMS 0 0 0 12895 588808.8125 0.963326588675683 -1 0.142181396484375 14 Unmodified _VLDKILPL_ ENSG00000152223|ENST00000282041|EPG5;ENST00000587974.1_1_18:43487913-43547205:-|nuORF;nc|ENSG00000152223|Q9HCE0-2|EPG5 2.302733041254933 0.8103549651115762 4 V 1 7 10.969 0.0 0.0 1.2059 0.0 0.0 792.507075276979 0.0 792.507075276979 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2059 + + 8 + 1 1.033 38457.9 1.0 8114 4793 12895 HBL1_DMSO_200M_050219_2,12909 HBL1_DMSO_200M_050219_2,12909,VLDKILPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12910 68.653 66.0 727100.0 25 0 49288.0 + 15596 IPYPRPIHL 9 86 553.3279266067219 1104.6413002802435 2 553.8301269412041 MULTI CID FTMS 0 0 0 12895 529745.0 0.572817705127071 -3 0.3083114624023437 15 Unmodified _IPYPRPIHL_ ENSG00000102897|ENST00000567954|LYRM1 26.88365393820708 0.1891292719743517 4 {I|L}PYP{I|L} 5 4 40.79 0.0 0.0 3.6926 0.0 0.0 0.0 518.2788179986936 518.2788179986936 29.820618910682484 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.0 {I|L}PYP{I|L} 3.6926 - 88 + 1 1.033 43462.5 1.0 8115 4793 12895 HBL1_DMSO_200M_050219_2,12910 HBL1_DMSO_200M_050219_2,12910,IPYPRPIHL False True IPYPRPIHL 68.653144 553.830126941204 81924530.0 12895.0 ENSG00000102897|ENST00000567954|LYRM1 4.0641874472300215 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12911 68.66 353.0 461130.0 25 0 29583.0 + 27989 PLYTNESSFV 10 158 578.777300143504 1155.540047353808 2 578.7787353396416 MULTI CID FTMS 0 0 0 12895 502361.75 1.0 0 0.0 16 Unmodified _PLYTNESSFV_ REV__ENSG00000009335|ENST00000348165|UBE3C;REV__nc|ENSG00000009335|Q15386-2|UBE3C;REV__nc|ENSG00000009335|Q15386-3|UBE3C 43.85829265575387 0.1168243637355526 4 [Y{I|L}]PP[YE]{M(Oxidation (M))|F}EV 9 -1 + 48.954 0.0 0.0 4.2365 4.2365 64.796 0.0 0.0 0.0 2.329474340178024 14.09256854528806 2.329474340178024 0.0447742132646311 0 0.7059771852360797 1.6989700043360187 0.7614393726401688 0.0 [Y{I|L}]PP[YE]{M(Oxidation (M))|F}EV;[Y{I|L}]P[WC(Carbamidomethyl (C))]A{M(Oxidation (M))|F}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P[YE]{M(Oxidation (M))|F}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[WC(Carbamidomethyl (C))]A{M(Oxidation (M))|F}TV;[Y{I|L}]AA[WD]A{M(Oxidation (M))|F}TV;[Y{I|L}]A[KC][DP]{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}A[WD]A{M(Oxidation (M))|F}TV;[Y{I|L}]A[YQ]EAAEV;[Y{I|L}]A[KC][PS]{M(Oxidation (M))|F}EV;[Y{I|L}]AACQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EV 4.2365;4.2326;4.0349;4.031;4.0159;3.9668;3.8182;3.7874;3.7874;3.7874 -;-;-;-;-;-;-;-;-;- 6432 1 1.033 126771.6 1.0 8116 4793 12895 HBL1_DMSO_200M_050219_2,12911 HBL1_DMSO_200M_050219_2,12911,PLYTNESSFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12912 68.668 446.0 354710.0 25 0 71927.0 -1 0 77 1047.7763232433686 3140.3071403303056 3 1048.112231433392 MULTI CID FTMS 0 0 0 12895 445957.15625 0.264759594783913 -2 0.2451858520507812 17 4 C(Carbamidomethyl (C))Y[YC(Carbamidomethyl (C))]T{M(Oxidation (M))|F}VY 8 -1 25.851 0.0 0.0 0.82321 0.0 0.0 1329.459286439827 651.3236178033811 1980.7829042432088 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 C(Carbamidomethyl (C))Y[YC(Carbamidomethyl (C))]T{M(Oxidation (M))|F}VY 0.82321 - 258 + 1 1.033 134106.7 1.0 8117 4793 12895 HBL1_DMSO_200M_050219_2,12912 HBL1_DMSO_200M_050219_2,12912, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12913 68.676 489.0 122540.0 25 0 15885.0 -1 0 97 1029.919793974391 2057.825035015582 2 1030.423266589642 MULTI CID FTMS 0 0 0 12895 346226.09375 1.0 0 0.0 18 4 [YQ]{I|L}ENYH 7 -1 43.262 0.0 0.0 2.1023 0.0 0.0 0.0 1107.366941103726 1107.366941103726 22.600453850821367 0.0 0.0 0.0 0 0.0 0.0 0.0 1.6307196863200843 [YQ]{I|L}ENYH 2.1023 - 1258 1 1.033 47834.2 1.0 8118 4793 12895 HBL1_DMSO_200M_050219_2,12913 HBL1_DMSO_200M_050219_2,12913, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12914 68.684 458.0 428770.0 25 0 25374.0 + 13913 HVVEILVET 9 163 519.7947846534107 1037.575016373621 2 519.7946044802666 MULTI CID FTMS 0 0 0 12895 305439.0 0.0224133876107363 22 -2.215156555175781 19 Unmodified _HVVEILVET_ ENSG00000170779|ENST00000336219|CDCA4 57.47134341890925 0.0274820932774257 4 [HV]VE{I|L}{I|L}VET 9 0 + 52.296 0.0 0.0 5.0402 5.0402 75.312 0.0 0.0 0.0 11.989700043360187 9.889917747712644 9.889917747712644 3.979400086720375 0 0.5138793319624578 1.3010299956639813 0.3054621874040891 0.0 + + [HV]VE{I|L}{I|L}VET;[HV]{I|L}D{I|L}{I|L}VET;[HV]VE{I|L}V{I|L}ET;[HV]V{I|L}E{I|L}VET;[HV]{I|L}D{I|L}V{I|L}ET;{NN|[MP]|[D{I|L}]|[EV]}HV{I|L}{I|L}VET;[HV]{I|L}EV{I|L}VET;[HV]{I|L}VE{I|L}VET;VVHE{I|L}{I|L}VET;[HV]V{I|L}EV{I|L}ET 5.0402;4.6567;4.286;4.0365;3.9025;3.8847;3.6929;3.653;3.4627;3.2823 +;-;-;-;-;-;-;-;-;- + 1076 1 1.033 148809.6 1.0 8119 4793 12895 HBL1_DMSO_200M_050219_2,12914 HBL1_DMSO_200M_050219_2,12914,HVVEILVET True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12915 68.693 506.0 176950.0 25 0 15724.0 -1 0 106 917.4285933242772 1832.8426337153544 2 917.4302856326104 MULTI CID FTMS 0 0 0 12895 249235.53125 1.0 0 0.0 20 4 [MN]PN{I|L}NEAQHH[NS]{I|L}{[QS]|[NT]} 16 -1 + 68.362 0.0 0.0 3.7298 3.7298 80.764 0.0 0.0 0.0 45.60911268361153 10.075156255085387 10.075156255085387 22.998037644757048 0 1.3979400086720375 1.3979400086720375 0.7059771852360797 0.7302046884880937 [MN]PN{I|L}NEAQHH[NS]{I|L}{[QS]|[NT]};{[QD]|[EN]|[WG]|[KD]|[RS]}VN{I|L}NEAQHH[NS]{I|L}{[QS]|[NT]};[MN]PN{I|L}NEAQHHA{[QN]|[E{I|L}]|[KN]}{[ES]|[DT]|[{I|L}C]};[MN]P{[VA]|[{I|L}G]}PP{[QD]|[EN]|[WG]|[KD]|[RS]}AEN{I|L}D[WH];[MN]P{[VA]|[{I|L}G]}PP[WQ]EN{I|L}D[WH];[MN]P{[VA]|[{I|L}G]}PP{[QD]|[EN]|[WG]|[KD]|[RS]}AEN{I|L}NV[QP];[NP]{I|L}N[NG]P{[QD]|[EN]|[WG]|[KD]|[RS]}AEN{I|L}NV[QP];[NP]{I|L}{[MG]|[TS]}PP{[QD]|[EN]|[WG]|[KD]|[RS]}AEN{I|L}NV[QP];[NP]{I|L}N[NG]P{[QD]|[EN]|[WG]|[KD]|[RS]}AEN{I|L}D[YC(Carbamidomethyl (C))];[NP]{I|L}{[MG]|[TS]}PP{[QD]|[EN]|[WG]|[KD]|[RS]}AEN{I|L}D[YC(Carbamidomethyl (C))] 3.7298;2.475;2.4271;2.3605;2.2547;2.2083;1.9888;1.9888;1.7596;1.7596 -;-;-;-;-;-;-;-;-;- 1909 + 1 1.033 65982.8 1.0 8120 4793 12895 HBL1_DMSO_200M_050219_2,12915 HBL1_DMSO_200M_050219_2,12915, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12917 68.698 6.5 8037900.0 25 0 1683500.0 + 17948 KQYGNEVFL 9 74 549.2855839883468 1096.5566150434936 2 549.2853271365166 MULTI CID FTMS 0 0 0 12916 7749710.0 0.946133793940708 1 -0.1409378051757812 1 Unmodified _KQYGNEVFL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 49.55428908609986 0.0413471690215031 4 [KQ]Y[NG]EV{M(Oxidation (M))|F}{I|L} 9 0 + 41.009 0.0 0.0 3.7398 3.7398 78.75 0.0 0.0 0.0 6.751736484954378 25.52432802706015 6.751736484954378 11.962724883926654 0 0.8182503180159344 0.0 0.3494850021680094 1.6989700043360187 + + [KQ]Y[NG]EV{M(Oxidation (M))|F}{I|L};[KQ]Y{[WN]|[YH]}V{M(Oxidation (M))|F}{I|L};[KQ]Y[NG]E{M(Oxidation (M))|F}[{I|L}V];[DV]H[NP][KQ]{M(Oxidation (M))|F}{I|L};[KQ]Y{[WN]|[YH]}{M(Oxidation (M))|F}[{I|L}V] 3.7398;2.6489;2.013;1.5308;1.2408 +;-;-;-;- + 71 1 1.033 47702.5 1.0 8121 4794 12916 HBL1_DMSO_200M_050219_2,12917 HBL1_DMSO_200M_050219_2,12917,KQYGNEVFL True True KQYGNEVFL 68.697552 549.285327136517 157889248.0 12916.0 ENST00000484403.5_1_21:30439206-30445917:-|nuORF;;nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 7.225482781728108 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12918 68.699 6.4 6919100.0 25 0 1694500.0 42130 VRRLPGGG 8 55 406.2486249125759 810.4826968919517 2 406.2485229372978 MULTI CID FTMS 0 0 0 12916 8219178.5 1.0 0 0.0 2 Unmodified _VRRLPGGG_ ENST00000497505.5_1_2:203879615-203880929:+|nuORF 0.0 0.8243325171867699 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.033 43036.9 1.0 8122 4794 12916 HBL1_DMSO_200M_050219_2,12918 HBL1_DMSO_200M_050219_2,12918,VRRLPGGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12919 68.7 7.5 6362700.0 25 0 587040.0 + 26183 NQFPGFKEV 9 81 533.2719200115437 1064.5292870898872 2 533.2718994021416 MULTI CID FTMS 0 0 0 12916 5620442.5 0.2255659473605845 -4 0.3704986572265625 3 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 26.268140514670165 0.1969607489560049 4 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}K[WP] 8 4 + 37.625 0.0 0.0 3.5344 3.5344 71.854 0.0 0.0 0.0 14.921525057367404 0.8539334317084268 0.8539334317084268 5.538500383907341 0 1.0 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}K[WP];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[PG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P[R{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.5344;3.0141;2.172 -;-;- 104 + 1 1.033 43960.3 1.0 8123 4794 12916 HBL1_DMSO_200M_050219_2,12919 HBL1_DMSO_200M_050219_2,12919,NQFPGFKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12920 68.701 40.0 1594700.0 25 0 127150.0 + 21826 LPNNRELYI 9 68 566.3112506145966 1130.607948295993 2 566.3116943240166 MULTI CID FTMS 0 0 0 12916 1760009.5 0.7501660958935128 2 -0.2308120727539062 4 Unmodified _LPNNRELYI_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78110025-78110175:-|nuORF 47.7319792270244 0.0453426645642791 4 {I|L}PT{I|L}[C(Carbamidomethyl (C))K]{[WT]|[RM]}{I|L} 9 6 + 54.094 0.0 0.0 4.7845 4.7845 84.797 0.0 0.0 0.0 16.029995833478736 9.242881055458838 9.242881055458838 25.36052793717261 0 0.4247425010840047 1.6989700043360187 0.4247425010840047 0.7059771852360797 {I|L}PT{I|L}[C(Carbamidomethyl (C))K]{[WT]|[RM]}{I|L};[NP]AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Y{I|L}{I|L};[NP]AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}Y{I|L};[Y{I|L}]AA[C(Carbamidomethyl (C))K]{I|L}[RH] 4.7845;2.5414;2.5227;0.78011 -;-;-;- 113 + 1 1.033 58031.3 1.0 8124 4794 12916 HBL1_DMSO_200M_050219_2,12920 HBL1_DMSO_200M_050219_2,12920,LPNNRELYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12921 68.702 21.0 1796800.0 25 0 241820.0 43625 YAKNNIPII 9 69 523.3046063582137 1044.5946597832274 2 523.3036987185478 MULTI CID FTMS 0 0 0 12916 1577136.375 0.6726063181570731 -5 0.4270401000976562 5 Unmodified _YAKNNIPII_ ENSG00000134910|ENST00000392708|STT3A;ENST00000526726.1_1_11:125479363-125482632:+|nuORF;ENST00000531001.1_1_11:125478078-125479612:+|nuORF;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;nc|ENSG00000134910|P46977-2|STT3A 5.230669730166228 0.7320841359114558 4 {I|L} 1 8 13.495 0.0 0.0 1.2919 0.0 0.0 913.499549775218 0.0 913.499549775218 0.0 2.525749891599532 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2919 + + 15 + 1 1.033 33627.7 1.0 8125 4794 12916 HBL1_DMSO_200M_050219_2,12921 HBL1_DMSO_200M_050219_2,12921,YAKNNIPII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12922 68.703 40.0 1396700.0 25 0 129600.0 + 40903 VLSCEGDPSV 10 75 503.23217100274496 1004.44978907229 2 503.2321960330009 MULTI CID FTMS 0 0 0 12916 966869.0625 0.0492614400605279 5 -0.5292129516601562 6 Unmodified _VLSCEGDPSV_ REV__ENST00000485822.1_1_9:116343338-116343629:+|nuORF 14.838274106304384 0.5985701837916485 4 V 1 -1 15.59 0.0 0.0 1.5521 0.0 0.0 887.3703345818587 0.0 887.3703345818587 0.0 10.105383415729625 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 V 1.5521 + + 33 + 1 1.033 47983.9 1.0 8126 4794 12916 HBL1_DMSO_200M_050219_2,12922 HBL1_DMSO_200M_050219_2,12922,VLSCEGDPSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12923 68.706 125.0 712970.0 25 0 31237.0 + 22599 LPYHETRIFV 10 120 425.5681091607076 1273.6824980823228 3 425.5683166384697 MULTI CID FTMS 0 0 0 12916 492812.375 0.8495655524300059 1 -0.1409378051757812 7 Unmodified _LPYHETRIFV_ ENSG00000119285|ENST00000366582|HEATR1 10.52747425323666 0.6709012183891286 4 {I|L}PYHET 6 4 36.375 0.0 0.0 2.8559 0.0 0.0 0.0 530.3101900690061 530.3101900690061 15.204262829037845 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}PYHET 2.8559 + + 1214 + 1 1.033 80218.6 1.0 8127 4794 12916 HBL1_DMSO_200M_050219_2,12923 HBL1_DMSO_200M_050219_2,12923,LPYHETRIFV False True LPYHETRIFV 68.706014 425.56831663847 4565395.5 12916.0 ENSG00000119285|ENST00000366582|HEATR1 2.442338148752848 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12924 68.708 112.0 404630.0 25 0 37478.0 + -1 SIDAIRKCLM 10 78 583.3048244501163 1164.5950959670324 2 583.3051635622978 MULTI CID FTMS 0 0 0 12916 403180.46875 0.1382816468351621 13 -1.3269729614257812 8 Oxidation (M) _SIDAIRKCLM(Oxidation (M))_ REV__ENSG00000100902|ENST00000261479|PSMA6;REV__ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;REV__ENST00000554843.5_1_14:35761682-35780127:+|nuORF;REV__nc|ENSG00000100902|P60900-2|PSMA6;REV__nc|ENSG00000100902|P60900-3|PSMA6 8.745405648335112 0.6861838735306406 4 {I|L}M{I|L}TS 5 -1 34.24 0.0 0.0 2.9401 0.0 0.0 338.17421081253866 278.11533533267817 616.2895461452168 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 {I|L}M{I|L}TS 2.9401 - 131 + 1 1.033 42166.2 1.0 8128 4794 12916 HBL1_DMSO_200M_050219_2,12924 HBL1_DMSO_200M_050219_2,12924,SIDAIRKCLM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12925 68.716 452.0 397490.0 25 0 70318.0 23725 LTVGLLKAL 9 178 464.3142129605128 926.6138729878256 2 464.3142578005791 MULTI CID FTMS 0 0 0 12916 378342.0625 1.0 0 0.0 9 Unmodified _LTVGLLKAL_ ENSG00000166189|ENST00000299238|HPS6 4.75600775471527 0.7486543447549536 4 [{I|L}P]M[YV]{I|L}P 7 7 19.04 0.0 0.0 2.0548 0.0 0.0 0.0 110.13510469720964 110.13510469720964 4.799917025319829 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P]M[YV]{I|L}P 2.0548 - 320 1 1.033 133984.1 1.0 8129 4794 12916 HBL1_DMSO_200M_050219_2,12925 HBL1_DMSO_200M_050219_2,12925,LTVGLLKAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12926 68.726 568.0 529640.0 25 0 28107.0 43473 WVEGQGGKM 9 279 331.16100712044613 990.4611919615384 3 331.1604492068291 MULTI CID FTMS 0 0 0 12916 328686.53125 0.0964765836937472 12 -1.2756118774414062 10 Unmodified _WVEGQGGKM_ ENST00000587091.5_2_X:73751613-73751946:+|nuORF 6.723162845929126 0.6799819581413107 4 TVN 3 8 24.922 0.0 0.0 2.5162 0.0 0.0 134.05748018928915 539.2205294244749 673.278009613764 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.7614393726401688 TVN 2.5162 - 1035 + 1 1.033 235335.0 1.0 8130 4794 12916 HBL1_DMSO_200M_050219_2,12926 HBL1_DMSO_200M_050219_2,12926,WVEGQGGKM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12927 68.737 640.0 379890.0 25 0 37384.0 -1 0 206 305.69784450140224 609.3811360696045 2 305.6977722048759 MULTI CID FTMS 0 0 0 12916 266724.78125 1.0 0 0.0 11 4 G 1 -1 6.7827 0.0 0.0 1.1131 0.0 0.0 442.3190918574936 107.01429926090076 549.3333911183943 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 G 1.1131 - 30 + 1 1.033 195010.3 1.0 8131 4794 12916 HBL1_DMSO_200M_050219_2,12927 HBL1_DMSO_200M_050219_2,12927, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12928 68.749 644.0 363880.0 25 0 24574.0 + 34522 SNTLTYVLEV 10 206 380.20541450037206 1137.5944141013165 3 380.2053405642509 MULTI CID FTMS 0 0 0 12916 230126.828125 1.0 0 0.0 12 Unmodified _SNTLTYVLEV_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|312|3|anti-sense 20.41453444215458 0.5050059513928961 4 {[QN]|[E{I|L}]|[KN]}{[WN]|[YH]}HV{I|L}EV 9 -1 + 42.75 0.0 0.0 3.758 3.758 71.096 0.0 0.0 0.0 4.299406940536542 9.621892823592972 4.299406940536542 4.299406940536542 0 0.0 0.494850021680094 2.0 0.0 {[QN]|[E{I|L}]|[KN]}{[WN]|[YH]}HV{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[WQ]HV{I|L}EV;[{I|L}T][Y{M(Oxidation (M))|F}]HV{I|L}{M(Oxidation (M))|F}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[NV]|[RG]}[MT]V{I|L}EV;HH{I|L}V{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P;[YV]{[QN]|[E{I|L}]|[KN]}HH{I|L}EV;[VP][RD][DP]V{I|L}EV;{[QN]|[E{I|L}]|[KN]}[YV]HH{I|L}EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RN]HH{I|L}EV;[{I|L}V][YE]HH{I|L}EV 3.758;3.38;2.209;2.1626;2.1097;1.9242;1.834;1.8299;1.7481;1.6998 -;-;-;-;-;-;-;-;-;- 585 1 1.033 196030.6 1.0 8132 4794 12916 HBL1_DMSO_200M_050219_2,12928 HBL1_DMSO_200M_050219_2,12928,SNTLTYVLEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12929 68.762 749.0 444660.0 25 0 32978.0 + 4383 DAVKILKL 8 289 300.5358825316852 898.5858181952557 3 300.5355407595634 MULTI CID FTMS 0 0 0 12916 191522.734375 0.8275528758099685 1 -0.1409378051757812 13 Unmodified _DAVKILKL_ ENSG00000107290|ENST00000224140|SETX;ENST00000477049.1_1_9:135139628-135141576:-|nuORF;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX 36.04419817259434 0.3004715606373109 4 {[DA]|[EG]}VK{I|L}{I|L}K{I|L} 8 0 + 62.137 0.0 0.0 6.915 6.915 86.755 0.0 0.0 0.0 15.639246528790508 7.514990556122044 7.514990556122044 7.434764440442393 0 0.3054621874040891 1.5228787452803376 0.0 1.0189301784845295 + + {[DA]|[EG]}VK{I|L}{I|L}K{I|L};{[DA]|[EG]}VK{I|L}K{I|L}{I|L};{[DA]|[EG]}VK{I|L}{I|L}{I|L}K;{[DA]|[EG]}V{I|L}K{I|L}K{I|L};{[DA]|[EG]}{I|L}VK{I|L}K{I|L};{[DA]|[EG]}V{I|L}KK{I|L}{I|L};{[DA]|[EG]}V{I|L}K{I|L}{I|L}K;{[DA]|[EG]}{I|L}VKK{I|L}{I|L};{[DA]|[EG]}{I|L}VK{I|L}{I|L}K 6.915;6.0876;6.0787;6.049;5.3853;5.2216;5.2127;4.5579;4.549 +;-;-;-;-;-;-;-;- + 192 + 1 1.033 263579.6 1.0 8133 4794 12916 HBL1_DMSO_200M_050219_2,12929 HBL1_DMSO_200M_050219_2,12929,DAVKILKL False True DAVKILKL 68.761664 300.535540759563 2398506.0 12916.0 ENSG00000107290|ENST00000224140|SETX;;ENST00000477049.1_1_9:135139628-135141576:-|nuORF;;nc|ENSG00000107290|Q7Z333-4|SETX;;nc|ENSG00000107290|Q7Z333-3|SETX 1.782471815745036 3.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12930 68.771 511.0 440580.0 25 0 34064.0 + 16339 IYLEGKIDY 9 187 557.2955399919222 1112.5765270506442 2 557.2963744997978 MULTI CID FTMS 0 0 0 12916 187949.390625 0.749475733519789 -1 0.0621871948242187 14 Unmodified _IYLEGKIDY_ ENSG00000106028|ENST00000265304|SSBP1;ENST00000489378.5_1_7:141438966-141445458:+|nuORF 57.72198328787511 0.0273433238377839 4 {I|L}Y{I|L}E[HT]P{I|L}Q 9 5 + 76.982 0.0 0.0 6.9193 6.9193 87.468 0.0 0.0 0.0 36.47817481888639 8.417118200384081 8.417118200384081 8.417118200384081 0 0.6643943297944485 2.0 0.7614393726401688 0.5891368308784531 {I|L}Y{I|L}E[HT]P{I|L}Q;{I|L}Y{I|L}E[HT]PQ{I|L};{I|L}Y{I|L}EGK{I|L}DY;{I|L}Y{I|L}[Y{M(Oxidation (M))|F}]GP{I|L}Q;{I|L}Y{I|L}E[WY]KV;{I|L}Y[{M(Oxidation (M))|F}V]YAP{I|L}Q;{I|L}Y{I|L}WK{I|L}DY;{I|L}Y{I|L}EG[YE]KV;{I|L}Y{I|L}E[HT]PAG{I|L};{I|L}Y{I|L}E[HT]PAAV 6.9193;6.1628;5.7774;5.6067;5.3596;5.2078;5.1952;5.1823;5.1492;5.1302 -;-;+;-;-;-;-;-;-;- + 5536 + 1 1.033 170608.4 1.0 8134 4794 12916 HBL1_DMSO_200M_050219_2,12930 HBL1_DMSO_200M_050219_2,12930,IYLEGKIDY True True IYLEGKIDY 68.770683 557.296374499798 2216898.25 12916.0 ENST00000489378.5_1_7:141438966-141445458:+|nuORF;;ENSG00000106028|ENST00000265304|SSBP1 4.445653597513835 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12931 68.774 78.0 424480.0 25 0 56383.0 + -1 IERDEMKL 8 66 525.2699618001042 1048.5253706670082 2 525.7580444216728 MULTI CID FTMS 0 0 0 12916 42096.6328125 0.0276383921819112 -4 0.3704986572265625 15 Oxidation (M) _IERDEM(Oxidation (M))KL_ REV__ENST00000302174.8_1_4:88356371-88363063:+|nuORF 8.593279151180031 0.7721714526254883 4 {I|L} 1 -1 15.485 0.0 0.0 1.4768 0.0 0.0 917.4303216941552 0.0 917.4303216941552 0.0 4.401056208558032 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4768 + + 38 + 1 1.033 35793.0 1.0 8135 4794 12916 HBL1_DMSO_200M_050219_2,12931 HBL1_DMSO_200M_050219_2,12931,IERDEMKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12932 68.786 704.0 217650.0 25 0 15825.0 + 23830 LVGGRGPLPTL 11 207 540.331055938366 1078.647558943532 2 540.3317138552666 MULTI CID FTMS 0 0 0 12916 160446.953125 0.4286076406706487 -6 0.461822509765625 16 Unmodified _LVGGRGPLPTL_ REV__ENST00000222990.7_1_7:2293201-2294050:-|nuORF 8.745405648335112 0.8338865417133445 4 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]PV{I|L}Y{M(Oxidation (M))|F} 9 -1 + 13.434 0.0 0.0 1.2455 1.2455 75.718 0.0 0.0 0.0 2.7209248098749725 1.2157748315550665 1.2157748315550665 13.434262327718628 0 0.0 1.6989700043360187 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]PV{I|L}Y{M(Oxidation (M))|F} 1.2455 - 964 + 1 1.033 118536.9 1.0 8136 4794 12916 HBL1_DMSO_200M_050219_2,12932 HBL1_DMSO_200M_050219_2,12932,LVGGRGPLPTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12933 68.799 723.0 560760.0 25 0 20683.0 + 42334 VTAGPTGF 8 126 749.3827163331005 748.3754398665004 1 749.3844482302666 MULTI CID FTMS 0 0 0 12916 158841.015625 0.0666962967080251 12 -1.2756118774414062 17 Unmodified _VTAGPTGF_ REV__ENSG00000110013|ENST00000263593|SIAE;REV__ENST00000436137.2_1_11:124530361-124543691:-|nuORF;REV__nc|ENSG00000110013|Q9HAT2-2|SIAE 46.92087301778293 0.1537303740847981 4 VTN{I|L}TCV 7 -1 + 66.077 0.0 0.0 8.8293 8.8293 91.535 0.0 0.0 0.0 19.300342328707288 9.159968432286746 9.159968432286746 8.450980400142576 0 1.1237125054200234 0.8860566476931632 1.1549471895720984 0.3494850021680094 VTN{I|L}TCV;VTNT{I|L}CV;VTN{I|L}SC{I|L};VTQVTCV;VTGG{I|L}TCV;{[QS]|[NT]}{I|L}VCTV;{[QS]|[NT]}V{I|L}CTV;VTNTVC{I|L};VTQS{I|L}CV;{[TV]|[{I|L}S]}QVCTV 8.8293;7.7001;7.6053;7.2826;7.1156;6.8647;6.8348;6.4761;6.1534;6.1015 -;-;-;-;-;-;-;-;-;- 2602 + 1 1.033 275670.9 1.0 8137 4794 12916 HBL1_DMSO_200M_050219_2,12933 HBL1_DMSO_200M_050219_2,12933,VTAGPTGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12934 68.813 800.0 117530.0 25 0 33317.0 -1 0 104 959.1138493107256 2874.319718532377 3 959.4483520388604 MULTI CID FTMS 0 0 0 12916 154305.84375 1.0 0 0.0 18 4 [DP]VTES{I|L}SWWN 11 -1 50.699 0.0 0.0 1.7639 0.0 0.0 0.0 1556.6758946400516 1556.6758946400516 30.825196442422428 0.0 0.0 0.0 0 0.0 0.0 1.9489700043360187 0.0 [DP]VTES{I|L}SWWN 1.7639 - 16938 1 1.033 68481.4 1.0 8138 4794 12916 HBL1_DMSO_200M_050219_2,12934 HBL1_DMSO_200M_050219_2,12934, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12935 68.828 800.0 302500.0 25 0 21971.0 25178 MSIPRTVL 8 218 458.76805691641925 915.5215608996384 2 458.7674743533134 MULTI CID FTMS 0 0 0 12916 143076.484375 0.2938504925975269 -5 0.4270401000976562 19 Unmodified _MSIPRTVL_ ENST00000443509.6_1_9:79323567-79323615:-|nuORF 30.63653989081413 0.3996269429323407 4 {I|L}V{I|L} 3 5 26.427 0.0 0.0 2.8865 0.0 0.0 572.2752074583282 0.0 572.2752074583282 0.0 3.0102999566398125 0.0 0.0 0 0.6505149978319906 0.0 0.0 0.0 {I|L}V{I|L} 2.8865 - 1370 1 1.033 185264.3 0.9800000190734864 8139 4794 12916 HBL1_DMSO_200M_050219_2,12935 HBL1_DMSO_200M_050219_2,12935,MSIPRTVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12936 68.834 365.0 496040.0 25 0 51216.0 4709 DEAAGGAL 8 158 352.1657971601308 702.3170413870616 2 352.1655761599541 MULTI CID FTMS 0 0 0 12916 130615.390625 0.3353070708146828 -1 0.0621871948242187 20 Unmodified _DEAAGGAL_ ENST00000507700.5_1_4:15646323-15656866:-|nuORF 14.581692164780916 0.6954967302934248 4 D{M(Oxidation (M))|F} 2 7 21.893 0.0 0.0 3.1173 0.0 0.0 0.0 437.1964510553344 437.1964510553344 8.398354457703373 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 D{M(Oxidation (M))|F} 3.1173 - 125 + 1 1.033 144209.9 1.0 8140 4794 12916 HBL1_DMSO_200M_050219_2,12936 HBL1_DMSO_200M_050219_2,12936,DEAAGGAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12938 68.838 5.2 9167900.0 25 0 644960.0 + 41416 VPLDKQITI 9 81 513.8132768777444 1025.6120008222888 2 513.8135864138603 MULTI CID FTMS 0 0 0 12937 10565620.0 0.9381480189057032 1 -0.089874267578125 1 Unmodified _VPLDKQITI_ ENSG00000163938|ENST00000418458|GNL3;nc|ENSG00000163938|Q9BVP2-2|GNL3 49.55428908609986 0.0413471690215031 4 [VP]EKQ{I|L}VT{I|L} 9 3 + 57.541 0.0 0.0 5.6104 5.6104 75.605 0.0 0.0 0.0 6.00833760139686 5.28582397795077 5.28582397795077 2.9659780392387347 0 1.1677353201839438 1.6989700043360187 0.0 0.0 [VP]EKQ{I|L}VT{I|L};[VP]EKQV{I|L}T{I|L};[{I|L}P]DKQ{I|L}VT{I|L};[{I|L}P]DKQV{I|L}T{I|L};[VP]EK[AG]{I|L}VT{I|L};[VP]EKN{I|L}{I|L}T{I|L};[VP]EK[AG]V{I|L}T{I|L};[{I|L}P]DK[AG]{I|L}VT{I|L};[{I|L}P]DKN{I|L}{I|L}T{I|L};[{I|L}P]DK[AG]V{I|L}T{I|L} 5.6104;5.3212;5.0246;4.7354;4.7126;4.5625;4.4234;4.1268;3.9767;3.8376 -;-;-;-;-;-;-;-;-;- 353 1 1.039 43668.9 1.0 8141 4795 12937 HBL1_DMSO_200M_050219_2,12938 HBL1_DMSO_200M_050219_2,12938,VPLDKQITI True True VPLDKQITI 68.838493 513.81358641386 396353496.0 12937.0 ENSG00000163938|ENST00000418458|GNL3;;nc|ENSG00000163938|Q9BVP2-2|GNL3 7.26268212000529 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12939 68.84 11.0 2623700.0 25 0 497430.0 + 4476 DAYALNHTLSV 11 53 602.3038844794894 1202.5932160257787 2 602.3041259646416 MULTI CID FTMS 0 0 0 12937 4285516.0 0.5339110423180387 1 -0.089874267578125 2 Unmodified _DAYALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 23.78978130925829 0.5336113198261219 4 {[DA]|[EG]}YA 4 7 29.654 0.0 0.0 2.4658 0.0 0.0 0.0 779.4056604440005 779.4056604440005 7.435012637084171 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 + {[DA]|[EG]}YA 2.4658 + + 43 1 1.039 24841.2 1.0 8142 4795 12937 HBL1_DMSO_200M_050219_2,12939 HBL1_DMSO_200M_050219_2,12939,DAYALNHTLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12940 68.841 9.4 6428400.0 25 0 752350.0 + 43847 YFIAPTGHSL 10 71 553.2874576690494 1104.5603624048988 2 553.2879516482353 MULTI CID FTMS 0 0 0 12937 5622123.0 0.3370824289405374 -2 0.203125 3 Unmodified _YFIAPTGHSL_ ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11 52.268347100219714 0.0668375294751462 4 [Y{M(Oxidation (M))|F}]{I|L}APTGS[H{I|L}] 10 2 + 44.108 0.0 0.0 3.9932 3.9932 74.633 0.0 0.0 0.0 8.842342674999486 1.7517364849543782 1.7517364849543782 6.709412807357744 0 0.8494850021680094 0.0 1.2302046884880935 0.0 [Y{M(Oxidation (M))|F}]{I|L}APTGS[H{I|L}];[Y{M(Oxidation (M))|F}]{I|L}AP[HA]{[WT]|[RM]};{[HG]|PP}[YR]PA{I|L}[YE];[HS][PA]S{I|L}A{I|L}[Y{M(Oxidation (M))|F}];{[HG]|PP}[TP]S{I|L}A{I|L}[Y{M(Oxidation (M))|F}];[HS][PA]SA{I|L}{I|L}[Y{M(Oxidation (M))|F}];[HS][PA]A{I|L}S{I|L}[Y{M(Oxidation (M))|F}];{[HG]|PP}[TP]SA{I|L}{I|L}[Y{M(Oxidation (M))|F}];{[HG]|PP}{[VA]|[{I|L}G]}D{I|L}A{I|L}[Y{M(Oxidation (M))|F}];{[HG]|PP}{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]A{I|L}[YE] 3.9932;3.3858;1.7612;1.502;1.3768;1.1417;1.0481;1.0165;0.94483;0.92756 -;-;-;-;-;-;-;-;-;- 464 + 1 1.039 52542.6 1.0 8143 4795 12937 HBL1_DMSO_200M_050219_2,12940 HBL1_DMSO_200M_050219_2,12940,YFIAPTGHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12941 68.842 17.0 2559900.0 25 0 329920.0 + 13983 HYYDSTIEL 9 69 570.7639078867431 1139.5132628402862 2 570.7644531130791 MULTI CID FTMS 0 0 0 12937 2739825.75 0.9559101157073696 -1 0.1409378051757812 4 Unmodified _HYYDSTIEL_ ENSG00000100453|ENST00000216341|GZMB;ENST00000526004.1_1_14:25101006-25102204:-|nuORF 50.855029805455786 0.0384952370514206 4 {[WN]|[YH]}{[YD]|[{M(Oxidation (M))|F}M]}ST{I|L}E{I|L} 9 0 + 49.274 0.0 0.0 4.3241 4.3241 83.291 0.0 0.0 0.0 19.15423722065668 27.23573514553724 19.15423722065668 29.661903266879715 0 0.6435078169319297 1.5228787452803376 0.9247425010840048 0.0 + + {[WN]|[YH]}{[YD]|[{M(Oxidation (M))|F}M]}ST{I|L}E{I|L};{[WN]|[YH]}{[YD]|[{M(Oxidation (M))|F}M]}S[VP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[HG]|PP}{[{M(Oxidation (M))|F}D]|MM}E{I|L};{[WN]|[YH]}{[YD]|[{M(Oxidation (M))|F}M]}[WP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[WN]|[YH]}{[YD]|[{M(Oxidation (M))|F}M]}[RV][C(Carbamidomethyl (C))K] 4.3241;1.7211;1.6149;1.4167;1.2622 +;-;-;-;- + 49 1 1.039 37626.3 1.0 8144 4795 12937 HBL1_DMSO_200M_050219_2,12941 HBL1_DMSO_200M_050219_2,12941,HYYDSTIEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12942 68.843 29.0 2298600.0 25 0 534970.0 27699 PLKSLVAT 8 75 414.7618786392324 827.5092043452647 2 414.7618286013603 MULTI CID FTMS 0 0 0 12937 2302279.5 0.6689999882314465 1 -0.089874267578125 5 Unmodified _PLKSLVAT_ ENSG00000083642|ENST00000315596|PDS5B;nc|ENSG00000083642|Q9NTI5-2|PDS5B 2.889219685676258 0.8067950007271085 4 {I|L}[WP] 3 7 10.458 0.0 0.0 1.2637 0.0 0.0 413.2837842786616 0.0 413.2837842786616 0.0 1.5317941458452395 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}[WP] 1.2637 - 10 + 1 1.039 59049.7 1.0 8145 4795 12937 HBL1_DMSO_200M_050219_2,12942 HBL1_DMSO_200M_050219_2,12942,PLKSLVAT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12943 68.844 23.0 2606800.0 25 0 263560.0 + 35940 SVPESPEFVRV 11 43 623.3271804643133 1244.6398079954265 2 623.3277465701103 MULTI CID FTMS 0 0 0 12937 2152503.5 1.0 0 0.0 6 Unmodified _SVPESPEFVRV_ ENSG00000084090|ENST00000337288|STARD7 35.61225514009592 0.279986979807413 4 [VS]PESPE 7 4 69.469 0.0 0.0 5.5814 0.0 0.0 0.0 516.2946871393186 516.2946871393186 40.28736992189167 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.274227503252014 0.0 + [VS]PESPE 5.5814 + + 39 + 1 1.039 53013.6 1.0 8146 4795 12937 HBL1_DMSO_200M_050219_2,12943 HBL1_DMSO_200M_050219_2,12943,SVPESPEFVRV False True SVPESPEFVRV 68.844386 623.32774657011 96752526.0 12937.0 ENSG00000084090|ENST00000337288|STARD7 7.970672607421875 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12944 68.846 34.0 1124600.0 25 0 241330.0 + -1 YPPSMEAVV 9 70 496.2379134987604 990.4612740643208 2 496.7413513064384 MULTI CID FTMS 0 0 0 12937 1243590.125 0.2921583143675207 13 -1.3159332275390625 7 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))EPRAC(Carbamidomethyl (C))V_ ENST00000574894.1_1_16:16367711-16371421:+|nuORF;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;nc|ENSG00000185164|Q5JPE7|NOMO2 11.114462752807354 0.7467182956244686 4 [KS]YA[YT]C(Carbamidomethyl (C))V 8 -1 + 27.625 0.0 0.0 2.7891 2.7891 45.522 0.0 0.0 0.0 11.170912423450403 7.791681396005998 7.791681396005998 0.0 0 0.0 0.0 0.0 0.0 [KS]YA[YT]C(Carbamidomethyl (C))V;[KS]AY[YT]C(Carbamidomethyl (C))V;[KS]AY[YC(Carbamidomethyl (C))]TV;[KS]YA[YC(Carbamidomethyl (C))]TV;[KS]AY[YT][CG]V;[KS]YA[YT][CG]V;[KS]Y{[{M(Oxidation (M))|F}H]|[RQ]}[Y{M(Oxidation (M))|F}] 2.7891;2.7891;2.4175;2.4175;1.8539;1.8539;0.73051 -;-;-;-;-;-;- 119 + 1 1.039 36139.1 1.0 8147 4795 12937 HBL1_DMSO_200M_050219_2,12944 HBL1_DMSO_200M_050219_2,12944,LMEPRACV False False YPPSMEAVV 68.845564 496.741351306438 206775456.0 12937.0 ENST00000574894.1_1_16:16367711-16371421:+|nuORF;;ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 5.596388339996338 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12945 68.847 54.0 761200.0 25 0 38684.0 -1 0 61 873.9146114817958 1745.8146700303914 2 873.9232055544853 MULTI CID FTMS 0 0 0 12937 819649.6875 0.0951910182452327 17 -1.732635498046875 8 4 {I|L}Q 2 -1 25.133 0.0 0.0 1.4396 0.0 0.0 1486.660799476231 0.0 1486.660799476231 0.0 3.662642662491425 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.3054621874040891 {I|L}Q 1.4396 - 86 + 1 1.039 35990.4 1.0 8148 4795 12937 HBL1_DMSO_200M_050219_2,12945 HBL1_DMSO_200M_050219_2,12945, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12946 68.848 45.0 698810.0 25 0 43226.0 22737 LQKGSWSLL 9 78 516.296685824842 0 516.2961913943291 PEAK CID FTMS 0 0 0 12937 721069.0625 0.5571476559687757 -4 0.4483108520507812 9 Unmodified _LQKGSWSLL_ ENSG00000182264|ENST00000332955|IZUMO1;nc|ENSG00000182264|Q8IYV9-2|IZUMO1 7.910154910731844 0.3362437653303669 4 A 1 9 6.9897 0.0 0.0 0.67823 0.0 0.0 360.1431630541777 596.3787935846311 956.5219566388088 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.67823 - 8 + 1 1.039 29774.7 1.0 8149 4795 12937 HBL1_DMSO_200M_050219_2,12946 HBL1_DMSO_200M_050219_2,12946,LQKGSWSLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12947 68.849 29.0 1857400.0 25 0 209920.0 + 10538 FVDPNGKISL 10 84 545.3004370476134 1088.5863211620267 2 545.3007079958916 MULTI CID FTMS 0 0 0 12937 561743.375 0.0461148981733277 -3 0.345306396484375 10 Unmodified _FVDPNGKISL_ ENSG00000107862|ENST00000369983|GBF1;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1 23.78978130925829 0.4341852049148378 4 [{M(Oxidation (M))|F}V]DPN 5 5 38.288 0.0 0.0 3.5173 0.0 0.0 0.0 513.3055513971311 513.3055513971311 16.372184226116673 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 + [{M(Oxidation (M))|F}V]DPN 3.5173 + + 120 + 1 1.039 46457.3 1.0 8150 4795 12937 HBL1_DMSO_200M_050219_2,12947 HBL1_DMSO_200M_050219_2,12947,FVDPNGKISL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12948 68.851 46.0 1273900.0 25 0 180390.0 41763 VPVANKRDT 9 85 500.2837958497906 998.5530387663812 2 500.2843200564384 MULTI CID FTMS 0 0 0 12937 682607.125 0.4987970920491524 -3 0.345306396484375 11 Unmodified _VPVANKRDT_ ENSG00000091640|ENST00000206020|SPAG7;ENST00000575142.5_1_17:4862831-4862993:-|nuORF 7.910154910731844 0.6385446671287552 4 [VP]Q 3 7 11.427 0.0 0.0 1.1443 0.0 0.0 0.0 671.3508652646811 671.3508652646811 0.589219599218497 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [VP]Q 1.1443 - 32 1 1.039 50253.0 1.0 8151 4795 12937 HBL1_DMSO_200M_050219_2,12948 HBL1_DMSO_200M_050219_2,12948,VPVANKRDT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12949 68.86 542.0 229510.0 25 0 81017.0 -1 0 54 1187.8061254223162 3560.396546867149 3 1188.476611316204 MULTI CID FTMS 0 0 0 12937 528025.3125 0.3668038699773875 2 -0.1485748291015625 12 4 {M(Oxidation (M))|F}GYW{M(Oxidation (M))|F} 5 -1 23.443 0.0 0.0 0.65845 0.0 0.0 1871.651748138436 985.4638758094076 2857.115623947844 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}GYW{M(Oxidation (M))|F} 0.65845 - 36 + 1 1.039 103226.8 1.0 8152 4795 12937 HBL1_DMSO_200M_050219_2,12949 HBL1_DMSO_200M_050219_2,12949, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12950 68.868 462.0 609390.0 25 0 20909.0 + -1 TYLVGNSL 8 153 866.9066694051579 1731.7987858771155 2 867.4031249880791 MULTI CID FTMS 0 0 0 12937 482665.71875 0.0359734669385053 23 -2.2507781982421875 13 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENSG00000136628|ENST00000366923|EPRS1 0.0 0.8751479354844584 4 [NP]{I|L}DVK{[CP]|[EA]}[C(Carbamidomethyl (C))H]{I|L}NP[EP] 15 -1 + 89.972 0.0 0.0 5.1953 5.1953 76.858 0.0 0.0 0.0 10.696661401747576 7.617608341954735 7.617608341954735 4.586513061938689 0 0.0 1.2218487496163564 1.5768323252109075 1.1861818737241734 [NP]{I|L}DVK{[CP]|[EA]}[C(Carbamidomethyl (C))H]{I|L}NP[EP];[NP]{I|L}[VS][HS]QDAD{I|L}NP[EP];[NP]{I|L}DV{[MG]|[TS]}[HN]AD{I|L}NP[EP];[NP]{I|L}DV[DN]V[C(Carbamidomethyl (C))H]{I|L}NP[EP];[YT]{I|L}VEEQWD{I|L}NP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DADQ[MN]{[ET]|[MV]}{I|L}Q;[NP]{I|L}DV[RH]{[C(Carbamidomethyl (C))G]|[NC]}D{I|L}NP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DADQ[{M(Oxidation (M))|F}V][QT]{I|L}Q;[YT]{I|L}VEEQDW{I|L}NP[EP];{[QV]|[N{I|L}]|[RA]|[KV]}PDVK{[CP]|[EA]}[C(Carbamidomethyl (C))H]{I|L}NP[EP] 5.1953;4.9304;4.8414;4.746;4.5776;4.5014;4.4244;4.4093;4.3758;4.311 -;-;-;-;-;-;-;-;-;- 27004 1 1.039 185942.4 1.0 8153 4795 12937 HBL1_DMSO_200M_050219_2,12950 HBL1_DMSO_200M_050219_2,12950,RCHRRRRRCCC False False TYLVGNSL 68.868445 867.403124988079 5387521.5 12937.0 ENSG00000136628|ENST00000366923|EPRS1 2.441831032435099 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12951 68.877 500.0 611250.0 25 0 160740.0 + -1 SVPDDLDGI 9 119 930.4428657730924 0 930.4427978396416 PEAK CID FTMS 0 0 0 12937 423400.90625 0.9655878918068952 -1 0.1409378051757812 14 ENSG00000136861|ENST00000349780|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2 4 W{I|L}GD{I|L}D 6 -1 37.278 0.0 0.0 2.0054 0.0 0.0 947.4482443598512 209.05758081607652 1156.5058251759276 0.0 0.0 0.0 0.0 0 0.0 0.0 1.263632853717045 0.0 W{I|L}GD{I|L}D 2.0054 - 2890 + 1 1.039 196879.5 1.0 8154 4795 12937 HBL1_DMSO_200M_050219_2,12951 HBL1_DMSO_200M_050219_2,12951, False False SVPDDLDGI 68.877299 930.442797839642 6620451.5 12937.0 ENSG00000136861|ENST00000349780|CDK5RAP2;;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2 4.452477216720581 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12952 68.88 160.0 383460.0 25 0 49242.0 37154 TIADLSYQDV 10 80 562.7749756524464 1123.5353983716927 2 562.7756835818291 MULTI CID FTMS 0 0 0 12937 387657.4375 0.0907126421840442 3 -0.2808380126953125 15 Unmodified _TIADLSYQDV_ ENSG00000101353|ENST00000343811|MROH8;nc|ENSG00000101353|Q9H579-2|MROH8;nc|ENSG00000101353|Q9H579|MROH8 14.40537977576856 0.6058337302021266 4 [VS]VD{I|L}RT 7 8 66.726 0.0 0.0 5.939 0.0 0.0 0.0 350.0856112115844 350.0856112115844 52.28933227713462 0.0 0.0 0.0 0 1.1989700043360187 2.0 0.0 0.0 [VS]VD{I|L}RT 5.939 - 234 + 1 1.039 53219.4 1.0 8155 4795 12937 HBL1_DMSO_200M_050219_2,12952 HBL1_DMSO_200M_050219_2,12952,TIADLSYQDV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12953 68.889 492.0 323440.0 25 0 44935.0 + 10274 FQWEDEKLSGA 11 139 655.3066006690489 1308.5986484048976 2 655.3072997927666 MULTI CID FTMS 0 0 0 12937 372323.40625 1.0 0 0.0 16 Unmodified _FQWEDEKLSGA_ ENSG00000168228|ENST00000302874|ZCCHC4;ENST00000505451.5_1_4:25314431-25353701:+|nuORF;nc|ENSG00000168228|Q9H5U6-2|ZCCHC4;nc|ENSG00000168228|Q9H5U6-3|ZCCHC4 84.5221896805406 0.0042935016478757 4 [SG]NGDEK{I|L}SGAQ{M(Oxidation (M))|F} 13 6 + 84.596 0.0 0.0 6.4646 6.4646 84.411 0.0 0.0 0.0 10.691805505119902 13.89980394824792 10.691805505119902 6.642078980768076 0 0.0 0.585026652029182 1.8539171939081167 1.336696871556164 [SG]NGDEK{I|L}SGAQ{M(Oxidation (M))|F};[SG]NGDEK{I|L}SQQ{M(Oxidation (M))|F};[SG]NGDTR{I|L}SGAQ{M(Oxidation (M))|F};[SG]NGDEK{I|L}SGA[AG]{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}EWSGAQ{M(Oxidation (M))|F};[SG]NGW{I|L}WSGAQ{M(Oxidation (M))|F};[SG]NGDTR{I|L}SQQ{M(Oxidation (M))|F};[SG]NGWW{I|L}SGAQ{M(Oxidation (M))|F};[SG]NGDEK{I|L}SQ[AG]{M(Oxidation (M))|F};[SG]NGDTR{I|L}SGA[AG]{M(Oxidation (M))|F} 6.4646;5.9571;5.9403;5.7713;5.6476;5.5207;5.4327;5.2702;5.2618;5.247 -;-;-;-;-;-;-;-;-;- 16643 1 1.039 115989.3 1.0 8156 4795 12937 HBL1_DMSO_200M_050219_2,12953 HBL1_DMSO_200M_050219_2,12953,FQWEDEKLSGA True True FQWEDEKLSGA 68.889168 655.307299792767 2743318.0 12937.0 nc|ENSG00000168228|Q9H5U6-3|ZCCHC4;;ENSG00000168228|ENST00000302874|ZCCHC4;;nc|ENSG00000168228|Q9H5U6-2|ZCCHC4;;ENST00000505451.5_1_4:25314431-25353701:+|nuORF 7.872667153676351 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12954 68.898 519.0 624640.0 25 0 110070.0 + 30733 RGLDVDGIYRV 11 149 631.8464790420636 0 631.8460571169853 PEAK CID FTMS 0 0 0 12937 310251.875 0.7898290238932179 -1 0.1409378051757812 17 Unmodified _RGLDVDGIYRV_ ENSG00000075884|ENST00000295095|ARHGAP15;ENSG00000123329|ENST00000393791|ARHGAP9;ENST00000546704.1_1_12:57868176-57868820:-|nuORF;ENST00000549436.5_1_2:144276854-144461094:+|nuORF;nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;nc|ENSG00000123329|Q9BRR9-4|ARHGAP9;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;nc|ENSG00000123329|Q9BRR9|ARHGAP9 51.76506608216692 0.04031861787234 4 VATENEV{M(Oxidation (M))|F} 8 10 57.587 0.0 0.0 4.5643 0.0 0.0 99.06709763570308 270.1581209772094 369.2252186129125 0.0 0.0 0.0 0.0 0 0.5796896906561032 0.0 0.805462187404089 1.0994850021680094 VATENEV{M(Oxidation (M))|F} 4.5643 - 2476 + 1 1.039 235898.0 1.0 8157 4795 12937 HBL1_DMSO_200M_050219_2,12954 HBL1_DMSO_200M_050219_2,12954,RGLDVDGIYRV True True RGLDVDGIYRV 68.89832 631.846057116985 2820237.0 12937.0 ENST00000549436.5_1_2:144276854-144461094:+|nuORF;;nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;;ENSG00000123329|ENST00000393791|ARHGAP9;;ENST00000546704.1_1_12:57868176-57868820:-|nuORF;;ENSG00000075884|ENST00000295095|ARHGAP15;;nc|ENSG00000123329|Q9BRR9|ARHGAP9;;nc|ENSG00000123329|Q9BRR9-4|ARHGAP9 6.52724568049113 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12955 68.901 74.0 809920.0 25 0 72282.0 + + 10014 FPPPVSPRL 9 89 505.2956289931484 1008.5767050530968 2 505.2953063845634 MULTI CID FTMS 0 0 0 12937 225503.40625 0.5369461514988243 8 -0.7928543090820312 18 Unmodified _FPLNGIIHV_ ENSG00000114423|ENST00000394030|CBLB 16.942295170755138 0.3780752226737986 4 PPPE 4 -1 30.79 0.0 0.0 3.0528 0.0 0.0 570.3509388654312 0.0 570.3509388654312 0.0 0.6124313711587348 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PPPE 3.0528 - 70 1 1.039 49694.3 1.0 8158 4795 12937 HBL1_DMSO_200M_050219_2,12955 HBL1_DMSO_200M_050219_2,12955,FPLNGIIHV False False FPPPVSPRL 68.901213 505.295306384563 0.0 12937.0 ENSG00000114423|ENST00000394030|CBLB -0.3669137756029765 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12956 68.913 653.0 341840.0 25 0 27340.0 + 30883 RIPEEILGKV 10 193 577.3503912750933 1152.6862296169866 2 577.3519775271416 MULTI CID FTMS 0 0 0 12937 225696.296875 0.9304692650809668 -4 0.4483108520507812 19 Unmodified _RIPEEILGKV_ ENSG00000126934|ENST00000262948|MAP2K2;ENST00000597008.5_1_19:4100806-4102439:-|nuORF 57.10758569107544 0.0441734977746303 4 [R{I|L}][EP]E{I|L}{I|L}GKV 10 0 + 72.524 0.0 0.0 6.2917 6.2917 84.888 0.0 0.0 0.0 8.032482964050345 15.026975159433526 8.032482964050345 8.032482964050345 0 1.9749073637206087 1.0457574905606752 0.0 0.5941876774005248 + + [R{I|L}][EP]E{I|L}{I|L}GKV;[KG]{I|L}YY{I|L}{I|L}GKV;{[TV]|[{I|L}S]}[QA][QP]{I|L}{I|L}GKV;[{I|L}P]{[RE]|[WV]}E{I|L}{I|L}GKV;[KG][DV][QP]{I|L}{I|L}GKV;[{I|L}V][WP]E{I|L}{I|L}GKV;{[TV]|[{I|L}S]}[VS][HT]{I|L}{I|L}GKV;{[QN]|[E{I|L}]|[KN]}[RP]E{I|L}{I|L}GKV;[PA]N[WR]{I|L}{I|L}GKV;[VP][W{I|L}]E{I|L}{I|L}GKV 6.2917;5.5949;5.3449;5.1737;4.7157;4.6688;4.608;4.5673;4.555;4.3206 +;-;-;-;-;-;-;-;-;- + 1542 1 1.039 165242.6 1.0 8159 4795 12937 HBL1_DMSO_200M_050219_2,12956 HBL1_DMSO_200M_050219_2,12956,RIPEEILGKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12957 68.924 655.0 360590.0 25 0 70289.0 + + -1 VYILTSNTSQY 11 146 645.317375012843 1288.6201970924858 2 645.3179199099541 MULTI CID FTMS 0 0 0 12937 221897.25 1.0 0 0.0 20 Carbamidomethyl (C) _IDAPVIENC(Carbamidomethyl (C))KM_ nc|ENSG00000026508|P16070-12|CD44;nc|ENSG00000026508|P16070-6|CD44;ENSG00000026508|ENST00000428726|CD44;nc|ENSG00000026508|P16070-14|CD44;nc|ENSG00000026508|P16070-5|CD44;nc|ENSG00000026508|P16070-15|CD44;nc|ENSG00000026508|P16070-10|CD44;ENST00000528086.5_1_11:35160721-35231518:+|nuORF;nc|ENSG00000026508|P16070-13|CD44;nc|ENSG00000026508|P16070-7|CD44;nc|ENSG00000026508|P16070-11|CD44;nc|ENSG00000026508|P16070-4|CD44;nc|ENSG00000026508|P16070-16|CD44;ENST00000531118.5_1_11:35198231-35211698:+|nuORF;nc|ENSG00000026508|P16070-18|CD44;nc|ENSG00000026508|P16070-3|CD44;nc|ENSG00000026508|P16070-17|CD44;nc|ENSG00000026508|P16070-8|CD44;nc|ENSG00000026508|P16070-9|CD44 12.240655878213236 0.7805268987462184 4 [YV]{I|L}{I|L} 4 -1 32.792 0.0 0.0 2.5447 0.0 0.0 0.0 797.298944000942 797.298944000942 11.285563682435171 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [YV]{I|L}{I|L} 2.5447 - 454 1 1.039 173901.2 1.0 8160 4795 12937 HBL1_DMSO_200M_050219_2,12957 HBL1_DMSO_200M_050219_2,12957,IDAPVIENCKM False False VYILTSNTSQY 68.924011 645.317919909954 0.0 12937.0 nc|ENSG00000026508|P16070-12|CD44;;nc|ENSG00000026508|P16070-6|CD44;;ENSG00000026508|ENST00000428726|CD44;;nc|ENSG00000026508|P16070-14|CD44;;nc|ENSG00000026508|P16070-5|CD44;;nc|ENSG00000026508|P16070-15|CD44;;nc|ENSG00000026508|P16070-10|CD44;;ENST00000528086.5_1_11:35160721-35231518:+|nuORF;;nc|ENSG00000026508|P16070-13|CD44;;nc|ENSG00000026508|P16070-7|CD44;;nc|ENSG00000026508|P16070-11|CD44;;nc|ENSG00000026508|P16070-4|CD44;;nc|ENSG00000026508|P16070-16|CD44;;ENST00000531118.5_1_11:35198231-35211698:+|nuORF;;nc|ENSG00000026508|P16070-18|CD44;;nc|ENSG00000026508|P16070-3|CD44;;nc|ENSG00000026508|P16070-17|CD44;;nc|ENSG00000026508|P16070-8|CD44;;nc|ENSG00000026508|P16070-9|CD44 1.3761619379123051 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12959 68.928 7.1 6336000.0 25 0 834380.0 + 37127 TGYLNTVTV 9 73 484.2583831501523 966.5022133671048 2 484.2588073611259 MULTI CID FTMS 0 0 0 12958 7996547.0 0.0227520958948785 14 -1.4738922119140625 1 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 29.081581746732265 0.1611639662936252 4 TN{I|L}CTV 6 5 47.484 0.0 0.0 4.913 0.0 0.0 317.1944873922984 0.0 317.1944873922984 0.0 39.52561882712928 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.4247425010840047 TN{I|L}CTV 4.913 - 100 + 1 1.039 42050.6 1.0 8161 4796 12958 HBL1_DMSO_200M_050219_2,12959 HBL1_DMSO_200M_050219_2,12959,TGYLNTVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12960 68.93 7.7 8814500.0 25 0 1282700.0 21076 LPAGGILVF 9 79 443.773538906193 885.532524879186 2 443.7736999392509 MULTI CID FTMS 0 0 0 12958 7312041.0 0.4267061585514948 20 -1.9901046752929688 2 Unmodified _LPAGGILVF_ ENSG00000150990|ENST00000308736|DHX37 20.871210003555333 0.2717241269066626 4 {I|L}P 2 7 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3728918830544 672.3728918830544 15.462118860987957 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 5.0564 + + 142 + 1 1.039 56309.6 1.0 8162 4796 12958 HBL1_DMSO_200M_050219_2,12960 HBL1_DMSO_200M_050219_2,12960,LPAGGILVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12961 68.931 7.6 5049000.0 25 0 748280.0 + 21229 LPDGRTLIV 9 55 492.2989127937813 982.5832726543626 2 492.2998229861259 MULTI CID FTMS 0 0 0 12958 5544227.0 0.7480252483263891 1 -0.0587005615234375 3 Unmodified _LPDGRTLIV_ ENSG00000106829|ENST00000376552|TLE4;ENSG00000140332|ENST00000451782|TLE3;ENST00000462803.5_1_9:82286241-82340056:+|nuORF;ENST00000557815.1_1_15:70346775-70346994:-|nuORF;nc|ENSG00000106829|Q04727-2|TLE4;nc|ENSG00000106829|Q04727-3|TLE4;nc|ENSG00000106829|Q04727-4|TLE4;nc|ENSG00000140332|Q04726-2|TLE3;nc|ENSG00000140332|Q04726-3|TLE3;nc|ENSG00000140332|Q04726-4|TLE3;nc|ENSG00000140332|Q04726-6|TLE3;nc|ENSG00000140332|Q04726-7|TLE3;nc|ENSG00000140332|Q04726|TLE3 20.41453444215458 0.284085796332423 4 {I|L}PD 3 6 40.802 0.0 0.0 4.1525 0.0 0.0 0.0 654.3977144830686 654.3977144830686 24.1195437047216 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {I|L}PD 4.1525 + + 18 + 1 1.039 36287.3 1.0 8163 4796 12958 HBL1_DMSO_200M_050219_2,12961 HBL1_DMSO_200M_050219_2,12961,LPDGRTLIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12962 68.932 15.0 4295500.0 25 0 685050.0 + 15597 IPYPRPIHL 9 71 369.2222359481853 1104.644878444756 3 369.2220641970634 MULTI CID FTMS 0 0 0 12958 3663505.5 1.0 0 0.0 4 Unmodified _IPYPRPIHL_ ENSG00000102897|ENST00000567954|LYRM1 34.10243960390752 0.1078313939113124 4 {I|L}PY[RP]P{I|L}H{I|L} 9 0 + 33.188 0.0 0.0 3.0044 3.0044 73.594 0.0 0.0 0.0 19.47650475770521 0.7480310337787444 0.7480310337787444 8.907854813243983 0 0.9876954943324544 0.0 0.0 0.0 + + {I|L}PY[RP]P{I|L}H{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[RP]P{I|L}H{I|L} 3.0044;2.198 +;- + 64 + 1 1.039 59772.8 1.0 8164 4796 12958 HBL1_DMSO_200M_050219_2,12962 HBL1_DMSO_200M_050219_2,12962,IPYPRPIHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12963 68.933 21.0 3466800.0 25 0 408030.0 + 21920 LPPHIIRL 8 66 320.2117583217455 957.6134455654365 3 320.2113830447197 MULTI CID FTMS 0 0 0 12958 2455994.25 0.3241806104694215 26 -2.53094482421875 5 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 22.736283301280096 0.5659792798204337 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 0 + 63.365 0.0 0.0 6.617 6.617 79.996 0.0 0.0 0.0 52.39577516576787 4.6040937697618745 4.6040937697618745 3.0102999566398125 0 0.0 1.6989700043360187 0.0 0.0 + + {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 6.617;6.3026;5.9882;3.8997 +;-;-;- + 81 + 1 1.039 65400.4 1.0 8165 4796 12958 HBL1_DMSO_200M_050219_2,12963 HBL1_DMSO_200M_050219_2,12963,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12964 68.934 22.0 2336700.0 25 0 211370.0 24284 MARLSLPL 8 68 450.7700398607845 899.5255267883689 2 450.7704345583916 MULTI CID FTMS 0 0 0 12958 2318445.5 0.5485191822388696 3 -0.29840087890625 6 Unmodified _MARLSLPL_ ENSG00000113555|ENST00000231484|PCDH12 15.847184025352805 0.6768015514314958 4 MA 2 6 40.445 0.0 0.0 4.4963 0.0 0.0 0.0 694.4258607209327 694.4258607209327 10.280287236002437 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + MA 4.4963 + + 56 + 1 1.039 46111.3 1.0 8166 4796 12958 HBL1_DMSO_200M_050219_2,12964 HBL1_DMSO_200M_050219_2,12964,MARLSLPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12965 68.935 21.0 2374600.0 25 0 163390.0 + 25251 MVPEDVPRL 9 75 528.2802041516114 1054.5458553700228 2 528.2779418826103 MULTI CID FTMS 0 0 0 12958 1998545.75 1.0 0 0.0 7 Unmodified _MVPEDVPRL_ ENSG00000272333|ENST00000420124|KMT2B 17.11289562659939 0.3734572693229295 4 {[ET]|[MV]}PEDV[RP]{I|L} 9 0 + 29.575 0.0 0.0 2.8045 2.8045 76.764 0.0 0.0 0.0 8.315468932362581 1.426675035687314 1.426675035687314 12.730012720637376 0 0.2742275032520141 0.0 0.0 0.0 + + {[ET]|[MV]}PEDV[RP]{I|L};{[ET]|[MV]}PE[K{I|L}][HC]V;[EP][VS][YK]Y{[VA]|[{I|L}G]};[TP][DV][YK]Y{[VA]|[{I|L}G]};{NN|[MP]|[D{I|L}]|[EV]}E[KA]{M(Oxidation (M))|F}Y{[VA]|[{I|L}G]} 2.8045;1.5974;0.78787;0.29204;0.26546 +;-;-;-;- + 103 + 1 1.039 48319.5 1.0 8167 4796 12958 HBL1_DMSO_200M_050219_2,12965 HBL1_DMSO_200M_050219_2,12965,MVPEDVPRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12966 68.937 34.0 1796300.0 25 0 509760.0 + 27343 PHSSPLALL 9 86 467.77147392708576 933.5283949209716 2 467.7717773318291 MULTI CID FTMS 0 0 0 12958 1716326.625 0.0696532070415244 -4 0.4351806640625 8 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 38.15118350030904 0.0856056900103839 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]PS{I|L}{I|L} 9 4 + 53.434 0.0 0.0 5.7238 5.7238 81.791 0.0 0.0 0.0 5.642492736872597 36.46082806091883 5.642492736872597 6.989700043360188 0 0.9247425010840048 0.0 1.2302046884880935 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]PS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA]PS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]{I|L}[PS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPS[TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP[TA]S{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}T[TA]{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}[VS]S{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA]{I|L}[PS]{I|L} 5.7238;4.9751;4.2037;3.7187;3.6866;3.6696;3.6148;3.5712;3.4674;3.455 -;-;-;-;-;-;-;-;-;- 252 1 1.039 53058.1 1.0 8168 4796 12958 HBL1_DMSO_200M_050219_2,12966 HBL1_DMSO_200M_050219_2,12966,PHSSPLALL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12967 68.938 59.0 897820.0 25 0 213730.0 -1 0 39 1047.7763232433686 3140.3071403303056 3 1048.111865222454 MULTI CID FTMS 0 0 0 12958 1502127.625 0.8917957605007524 1 -0.0587005615234375 9 4 VY 2 -1 9.464 0.0 0.0 0.30137 0.0 0.0 2223.8352297851875 651.3258761041624 2875.16110588935 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VY 0.30137 - 7 + 1 1.039 56954.0 1.0 8169 4796 12958 HBL1_DMSO_200M_050219_2,12967 HBL1_DMSO_200M_050219_2,12967, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12968 68.941 118.0 850730.0 25 0 92918.0 + 21917 LPPHIIRL 8 97 479.8140515051801 957.6135500771602 2 479.8138000369072 MULTI CID FTMS 0 0 0 12958 718823.0625 0.326470235583092 14 -1.4738922119140625 10 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 43.85829265575387 0.1697421968005898 4 {I|L}PPH{I|L}{I|L}R{I|L} 8 0 + 83.837 0.0 0.0 8.7548 8.7548 98.758 0.0 0.0 0.0 70.36806291892539 14.024174299985006 14.024174299985006 83.83716304900595 0 0.4247425010840047 2.0 0.0 0.3494850021680094 + + {I|L}PPH{I|L}{I|L}R{I|L} 8.7548 + + 76 + 1 1.039 82432.1 1.0 8170 4796 12958 HBL1_DMSO_200M_050219_2,12968 HBL1_DMSO_200M_050219_2,12968,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12969 68.942 36.0 1138500.0 25 0 99605.0 + 3512 DATKLLPSV 9 71 472.278761774341 942.542970615482 2 472.2767516970634 MULTI CID FTMS 0 0 0 12958 776928.4375 0.9989783476893443 -1 0.089874267578125 11 Unmodified _CRRILPVS_ ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-21|TAF1;ENST00000483365.1_1_X:70596867-70597689:+|nuORF;nc|ENSG00000147133|P21675-1|TAF1;ENSG00000122728|ENST00000242310|TAF1L;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-25|TAF1;nc|ENSG00000147133|P21675-23|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-24|TAF1 18.13498045792455 0.6430038125133779 4 {I|L}G{[VA]|[{I|L}G]}PSV 7 6 31.392 0.0 0.0 3.3306 0.0 0.0 301.16578673949647 0.0 301.16578673949647 0.0 13.78511456833712 0.0 0.0 0 0.0 0.0 1.6989700043360187 0.0 {I|L}G{[VA]|[{I|L}G]}PSV 3.3306 - 224 + 1 1.039 38204.6 1.0 8171 4796 12958 HBL1_DMSO_200M_050219_2,12969 HBL1_DMSO_200M_050219_2,12969,CRRILPVS False False DATKLLPSV 68.941748 472.276751697063 8239854.5 12958.0 ENSG00000147133|ENST00000423759|TAF1;;nc|ENSG00000147133|P21675-18|TAF1;;nc|ENSG00000147133|P21675-21|TAF1;;ENST00000483365.1_1_X:70596867-70597689:+|nuORF;;nc|ENSG00000147133|P21675-1|TAF1;;ENSG00000122728|ENST00000242310|TAF1L;;nc|ENSG00000147133|P21675-19|TAF1;;nc|ENSG00000147133|P21675-17|TAF1;;nc|ENSG00000147133|P21675-16|TAF1;;nc|ENSG00000147133|P21675-25|TAF1;;nc|ENSG00000147133|P21675-23|TAF1;;nc|ENSG00000147133|P21675-15|TAF1;;nc|ENSG00000147133|P21675-13|TAF1;;nc|ENSG00000147133|P21675|TAF1;;nc|ENSG00000147133|P21675-22|TAF1;;nc|ENSG00000147133|P21675-20|TAF1;;nc|ENSG00000147133|P21675-24|TAF1 3.1067794958750405 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12970 68.945 148.0 951640.0 25 0 225900.0 + 32004 RVIDLRAEL 9 94 542.8279644400536 1083.6413759469071 2 542.8279907107353 MULTI CID FTMS 0 0 0 12958 497530.34375 0.6203578186463355 -2 0.2308120727539062 12 Unmodified _RVIDLRAEL_ ENSG00000130254|ENST00000252542|SAFB2;ENSG00000160633|ENST00000588852|SAFB;ENST00000586934.5_1_19:5623180-5651054:+|nuORF;nc|ENSG00000130254|Q14151-2|SAFB2;nc|ENSG00000160633|Q15424-2|SAFB;nc|ENSG00000160633|Q15424-4|SAFB;nc|ENSG00000160633|Q15424|SAFB 32.037481411007896 0.1235546156350648 4 {[QN]|[E{I|L}]|[KN]}[Q{I|L}]{I|L}R[NS]A 9 6 34.956 0.0 0.0 3.2258 0.0 0.0 0.0 56.02672273524891 56.02672273524891 10.659387198976596 0.0 0.0 0.0 0 1.0 0.8239087409443188 0.3807196863200844 0.7302046884880937 {[QN]|[E{I|L}]|[KN]}[Q{I|L}]{I|L}R[NS]A 3.2258 - 148 1 1.039 111114.6 1.0 8172 4796 12958 HBL1_DMSO_200M_050219_2,12970 HBL1_DMSO_200M_050219_2,12970,RVIDLRAEL True True RVIDLRAEL 68.944705 542.827990710735 13326202.0 12958.0 nc|ENSG00000160633|Q15424-2|SAFB;;nc|ENSG00000160633|Q15424|SAFB;;ENST00000586934.5_1_19:5623180-5651054:+|nuORF;;ENSG00000130254|ENST00000252542|SAFB2;;ENSG00000160633|ENST00000588852|SAFB;;nc|ENSG00000160633|Q15424-4|SAFB;;nc|ENSG00000130254|Q14151-2|SAFB2 5.858951886494954 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12971 68.948 192.0 784840.0 25 0 89679.0 -1 FPFYGKPMRI 10 104 424.55842091939263 1270.653433358378 3 424.5583373904228 MULTI CID FTMS 0 0 0 12958 436302.75 0.4977758243112271 14 -1.4738922119140625 13 Oxidation (M) _FPFYGKPM(Oxidation (M))RI_ ENSG00000125870|ENST00000246071|SNRPB2 14.95716135407024 0.5965753712453801 4 {I|L}KGY{M(Oxidation (M))|F}PE 7 -1 44.306 0.0 0.0 3.4869 0.0 0.0 418.1994801251969 0.0 418.1994801251969 0.0 17.38504319397824 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}KGY{M(Oxidation (M))|F}PE 3.4869 - 459 1 1.039 122547.8 1.0 8173 4796 12958 HBL1_DMSO_200M_050219_2,12971 HBL1_DMSO_200M_050219_2,12971,FPFYGKPMRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12972 68.95 79.0 911550.0 25 0 75811.0 + 40454 VILPTVHEV 9 108 503.8005911053585 1005.586629277517 2 503.8007690310478 MULTI CID FTMS 0 0 0 12958 381589.40625 1.0 0 0.0 14 Unmodified _VILPTVHEV_ ENSG00000174839|ENST00000311128|DENND6A;ENST00000487662.1_1_3:57643405-57651906:-|nuORF 28.486842064014134 0.1687311288560894 4 [{I|L}V]{I|L}P{[TV]|[{I|L}S]}[HD]{I|L} 9 2 + 47.61 0.0 0.0 4.7345 4.7345 85.495 0.0 0.0 0.0 30.02985726649209 3.669687155616401 3.669687155616401 47.60984977102048 0 0.9247425010840048 2.0 0.0 0.0 [{I|L}V]{I|L}P{[TV]|[{I|L}S]}[HD]{I|L} 4.7345 - 221 + 1 1.039 59736.6 1.0 8174 4796 12958 HBL1_DMSO_200M_050219_2,12972 HBL1_DMSO_200M_050219_2,12972,VILPTVHEV False True VILPTVHEV 68.95018 503.800769031048 7115676.5 12958.0 ENST00000487662.1_1_3:57643405-57651906:-|nuORF;;ENSG00000174839|ENST00000311128|DENND6A 6.085651238759358 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12973 68.953 163.0 194600.0 25 0 8007.1 + 15593 IPYPLSENNQV 11 66 637.3246690404161 1272.634785147632 2 637.3247558474541 MULTI CID FTMS 0 0 0 12958 389732.65625 0.0462723273172871 10 -1.0447998046875 15 Unmodified _IPYPLSENNQV_ ENSG00000104549|ENST00000265896|SQLE 45.69961567697781 0.1414455360291008 4 [{I|L}P]YP{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]} 11 0 + 68.945 0.0 0.0 5.4175 5.4175 77.455 0.0 0.0 0.0 4.2935495224813 0.8354605145007383 0.8354605145007383 4.2935495224813 0 0.0 1.5228787452803376 0.0 0.3494850021680094 + + [{I|L}P]YP{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENN{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]YP{I|L}SEGGN{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]YP{I|L}SENGG{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SEGGN{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SENGG{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]YP{I|L}SEGGGG{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}SEGGGG{[QV]|[N{I|L}]|[RA]|[KV]} 5.4175;5.0801;4.7002;4.7002;4.3628;4.3628;3.7106;3.3733 +;-;-;-;-;-;-;- + 289 1 1.039 32130.5 1.0 8175 4796 12958 HBL1_DMSO_200M_050219_2,12973 HBL1_DMSO_200M_050219_2,12973,IPYPLSENNQV False True IPYPLSENNQV 68.953403 637.324755847454 646834480.0 12958.0 ENSG00000104549|ENST00000265896|SQLE 6.442439079284668 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12974 68.955 86.0 741020.0 25 0 79784.0 22251 LPRLGYPSL 9 85 508.3005432258792 1014.5865335185584 2 508.7970153689384 MULTI CID FTMS 0 0 0 12958 357375.3125 0.2371178913627789 -7 0.6578521728515625 16 Unmodified _LPRLGYPSL_ ENST00000537356.3_1_X:103357254-103357665:+|nuORF 4.75600775471527 0.7486543447549536 4 {I|L} 1 8 11.594 0.0 0.0 1.1427 0.0 0.0 883.4914235105491 0.0 883.4914235105491 0.0 0.756338376653245 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1427 + + 26 + 1 1.039 53343.2 1.0 8176 4796 12958 HBL1_DMSO_200M_050219_2,12974 HBL1_DMSO_200M_050219_2,12974,LPRLGYPSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12975 68.959 185.0 441840.0 25 0 80346.0 -1 0 99 380.1912156522832 379.1839391856832 1 380.1916992068291 MULTI CID FTMS 0 0 0 12958 319146.1875 0.3693508478592526 -12 0.8001174926757812 17 4 P 1 -1 13.495 0.0 0.0 3.5589 0.0 0.0 264.12006391888474 0.0 264.12006391888474 0.0 0.7306401783911909 0.0 0.0 0 0.0 0.0 0.0 0.0 P 3.5589 - 14 + 1 1.039 68227.9 1.0 8177 4796 12958 HBL1_DMSO_200M_050219_2,12975 HBL1_DMSO_200M_050219_2,12975, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12976 68.962 178.0 396570.0 25 0 95046.0 + 44727 YPIGTNAIV 9 108 474.2635225309403 946.5124921286806 2 474.2636901736259 MULTI CID FTMS 0 0 0 12958 317070.875 0.3606704297303453 -4 0.4351806640625 18 Unmodified _YPIGTNAIV_ ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-4|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B 44.40701690623563 0.0526327925666318 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]Y{I|L}V 7 5 + 44.128 0.0 0.0 4.6622 4.6622 69.039 0.0 0.0 0.0 1.4148285798201954 9.520082085180944 1.4148285798201954 1.4148285798201954 0 0.5242275032520141 1.3979400086720375 0.9916440611282626 0.6505149978319906 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]Y{I|L}V;{[QN]|[E{I|L}]|[KN]}T{I|L}PY{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VP]PY{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[NV]|[RG]}[TA]A{I|L}V;[{I|L}A][PS]{[QG]|[NA]}Y{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DV]{[QN]|[E{I|L}]|[KN]}{I|L}V;[{I|L}A][PS][YN]A{I|L}V;[{I|L}P]{[SA]|[TG]}{[QG]|[NA]}Y{I|L}V;{[SA]|[TG]}{[QG]|[NA]}{I|L}PY{I|L}V;[{I|L}P][NS]AAY{I|L}V 4.6622;4.5127;4.016;3.5731;3.1452;2.9305;2.8481;2.6952;2.6952;2.5092 -;-;-;-;-;-;-;-;-;- 333 1 1.039 60065.8 1.0 8178 4796 12958 HBL1_DMSO_200M_050219_2,12976 HBL1_DMSO_200M_050219_2,12976,YPIGTNAIV True True YPIGTNAIV 68.962319 474.263690173626 20621452.0 12958.0 nc|ENSG00000125630|Q9H9Y6-5|POLR1B;;ENSG00000125630|ENST00000263331|POLR1B;;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;;nc|ENSG00000125630|Q9H9Y6-4|POLR1B 2.091776149968306 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12977 68.972 570.0 208780.0 25 0 14141.0 + + -1 SEVDSPNVLTV 11 151 579.796266695246 1157.577980457292 2 580.2957641482353 MULTI CID FTMS 0 0 0 12958 268714.375 1.0 0 0.0 19 Carbamidomethyl (C) _LFSATFC(Carbamidomethyl (C))LLS_ ENSG00000171940|ENST00000371471|ZNF217 25.399314129420983 0.3980215340001851 4 {I|L}Y{I|L}EYP{M(Oxidation (M))|F}T{I|L} 9 -1 + 52.19 0.0 0.0 4.5086 4.5086 72.717 0.0 0.0 0.0 27.05686044462337 1.6597289465512546 1.6597289465512546 3.606332340344366 0 0.3054621874040891 1.5228787452803376 0.2887254899964357 0.0 {I|L}Y{I|L}EYP{M(Oxidation (M))|F}T{I|L};{I|L}Y{I|L}QQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TV;{I|L}Y{I|L}EYE{I|L}C{I|L};{I|L}Y{I|L}QQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L};{I|L}Y[RN]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TV;{I|L}YQQ{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TV;{I|L}Y[RN]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L};[NP]VSD{I|L}CVRR;{I|L}YQQ{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L};[VP]NSD{I|L}CVRR 4.5086;4.197;4.0534;3.9696;3.8533;3.7849;3.6259;3.594;3.5575;3.4092 -;-;-;-;-;-;-;-;-;- 1895 + 1 1.039 94468.5 1.0 8179 4796 12958 HBL1_DMSO_200M_050219_2,12977 HBL1_DMSO_200M_050219_2,12977,LFSATFCLLS False False SEVDSPNVLTV 68.972319 580.295764148235 3427167.75 12958.0 ENSG00000171940|ENST00000371471|ZNF217 5.480759779612224 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12978 68.983 594.0 310930.0 25 0 34814.0 + 17805 KQLDAENLEL 10 161 586.8114103559078 1171.6082677786155 2 586.8121215701103 MULTI CID FTMS 0 0 0 12958 237105.265625 0.5795031805442422 -1 0.089874267578125 20 Unmodified _KQLDAENLEL_ ENSG00000015133|ENST00000389857|CCDC88C 103.41943736471065 0.0068563894390004 4 {[QN]|[E{I|L}]|[KN]}NKAEN{I|L}E{I|L} 10 3 + 115.41 0.0 0.0 9.8504 9.8504 80.392 0.0 0.0 0.0 7.922269210502634 16.53212513775344 7.922269210502634 0.1979531151190769 0 0.6549471895720985 1.2218487496163564 2.177024649883633 1.548455006504028 {[QN]|[E{I|L}]|[KN]}NKAEN{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NAKEN{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EKAEN{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EAKEN{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}GGKAEN{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NKAEGG{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}GGAKEN{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NAKEGG{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NAEKN{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKAEN{I|L}E{I|L} 9.8504;9.8335;9.1742;9.1573;9.0682;9.0682;9.0513;9.0513;8.918;8.4768 -;-;-;-;-;-;-;-;-;- 5035 1 1.039 139506.5 1.0 8180 4796 12958 HBL1_DMSO_200M_050219_2,12978 HBL1_DMSO_200M_050219_2,12978,KQLDAENLEL True True KQLDAENLEL 68.982709 586.81212157011 3105034.0 12958.0 ENSG00000015133|ENST00000389857|CCDC88C 5.358183701833089 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12980 68.987 2.2 25717000.0 25 0 2652600.0 + 26184 NQFPGFKEV 9 80 533.2719200115437 1064.5292870898872 2 533.2724487185478 MULTI CID FTMS 0 0 0 12979 23337082.0 0.9365901368017988 -1 0.0587005615234375 1 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 29.84058131909904 0.1515068451768857 4 GGQ{M(Oxidation (M))|F} 4 8 37.77 0.0 0.0 3.548 0.0 0.0 0.0 672.3357589580322 672.3357589580322 12.764458039930688 0.0 0.0 0.0 0 1.0 1.3979400086720375 0.0 0.7134679910804405 GGQ{M(Oxidation (M))|F} 3.548 - 195 1 1.039 48011.8 1.0 8181 4797 12979 HBL1_DMSO_200M_050219_2,12980 HBL1_DMSO_200M_050219_2,12980,NQFPGFKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12981 68.988 26.0 1729500.0 25 0 406460.0 42131 VRRLPGGG 8 66 406.2486249125759 810.4826968919517 2 406.2485229372978 MULTI CID FTMS 0 0 0 12979 1893942.75 0.2304296895364908 3 -0.3491592407226562 2 Unmodified _VRRLPGGG_ ENST00000497505.5_1_2:203879615-203880929:+|nuORF 0.0 0.8243325171867699 4 R 1 7 1.1092 0.0 0.0 0.13686 0.0 0.0 575.339140228669 76.02499567203358 651.3641359007025 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.13686 + + 1 + 1 1.039 43665.2 1.0 8182 4797 12979 HBL1_DMSO_200M_050219_2,12981 HBL1_DMSO_200M_050219_2,12981,VRRLPGGG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12982 68.989 18.0 2691100.0 25 0 434260.0 + 30752 RHLDRHVI 8 82 523.3046063582137 1044.5946597832274 2 523.3040649294853 MULTI CID FTMS 0 0 0 12979 1775584.625 0.7572391684882401 -2 0.1485748291015625 3 Unmodified _RHLDRHVI_ REV__ENST00000441802.6_1_4:187584643-187584718:-|nuORF 2.889219685676258 0.8067950007271085 4 V{I|L}D 3 -1 14.693 0.0 0.0 1.4065 0.0 0.0 129.1311720896711 585.2658785455686 714.3970506352398 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}D 1.4065 - 26 + 1 1.039 43818.1 1.0 8183 4797 12979 HBL1_DMSO_200M_050219_2,12982 HBL1_DMSO_200M_050219_2,12982,RHLDRHVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12983 68.991 35.0 1501700.0 25 0 226290.0 + 45656 YVRDDAVFI 9 84 549.2855839883468 1096.5566150434936 2 549.2855712771416 MULTI CID FTMS 0 0 0 12979 999260.75 0.1219960959227554 4 -0.4467620849609375 4 Unmodified _YVRDDAVFI_ ENSG00000076604|ENST00000262395|TRAF4;nc|ENSG00000076604|Q9BUZ4-2|TRAF4 36.506200033944 0.094635877243972 4 [DV]V[YN]EV{M(Oxidation (M))|F}{I|L} 9 5 + 69.887 0.0 0.0 6.3733 6.3733 89.772 0.0 0.0 0.0 14.259687322722812 14.973024840566469 14.259687322722812 14.259687322722812 0 0.8252574989159953 1.6989700043360187 0.6747425010840047 0.805462187404089 [DV]V[YN]EV{M(Oxidation (M))|F}{I|L};[WK]{M(Oxidation (M))|F}EEV{M(Oxidation (M))|F}{I|L};[DV][Y{I|L}][DN]V{M(Oxidation (M))|F}{I|L};[YV][QA]EEV{M(Oxidation (M))|F}{I|L};[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EEV{M(Oxidation (M))|F}{I|L};[YV]{NN|[MP]|[D{I|L}]|[EV]}[DN]V{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]{[QS]|[NT]}EEV{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DN]V{M(Oxidation (M))|F}{I|L};[DV]V[Y{M(Oxidation (M))|F}][WR]{I|L};[DV][Y{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E[KS] 6.3733;5.0729;5.0519;5.0214;4.2283;4.0211;3.7321;2.7318;2.5413;1.2394 -;-;-;-;-;-;-;-;-;- 375 1 1.039 45883.8 1.0 8184 4797 12979 HBL1_DMSO_200M_050219_2,12983 HBL1_DMSO_200M_050219_2,12983,YVRDDAVFI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12984 68.992 66.0 672480.0 25 0 53782.0 21805 LPNHVIYLY 9 85 566.3112506145966 1130.607948295993 2 566.3121826052666 MULTI CID FTMS 0 0 0 12979 357851.25 0.1525263784787033 5 -0.5816268920898438 5 Unmodified _LPNHVIYLY_ ENSG00000126010|ENST00000380289|GRPR 23.1484247019978 0.2366544122328345 4 {I|L}PN[RD]Q{I|L}Y{I|L} 9 4 + 43.795 0.0 0.0 3.8736 3.8736 81.958 0.0 0.0 0.0 26.36046240493748 7.681146847855089 7.681146847855089 34.463950151760656 0 1.048455006504028 1.3010299956639813 0.0 0.0 {I|L}PN[RD]Q{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}{[MG]|[TS]}[Q{I|L}]Y{I|L} 3.8736;0.82535 -;- 46 + 1 1.039 37588.7 1.0 8185 4797 12979 HBL1_DMSO_200M_050219_2,12984 HBL1_DMSO_200M_050219_2,12984,LPNHVIYLY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12985 68.994 62.0 868300.0 25 0 95125.0 27743 PLNFQIYL 8 88 504.27999202486376 1006.5454311165277 2 504.2810546755791 MULTI CID FTMS 0 0 0 12979 304774.28125 0.0156526724648414 27 -2.749786376953125 6 Unmodified _PLNFQIYL_ ENST00000415807.6_1_3:172115292-172115697:+|nuORF 20.871210003555333 0.6025813472596342 4 Y{I|L} 2 6 15.217 0.0 0.0 1.5118 0.0 0.0 712.3864478175026 0.0 712.3864478175026 0.0 4.503187623076954 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + Y{I|L} 1.5118 + + 125 + 1 1.039 46753.1 1.0 8186 4797 12979 HBL1_DMSO_200M_050219_2,12985 HBL1_DMSO_200M_050219_2,12985,PLNFQIYL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 12986 69.004 561.0 315400.0 25 0 27542.0 + 26154 NPYDRGSAFAI 11 184 605.7962618425759 1209.5779707519516 2 605.7973510622978 MULTI CID FTMS 0 0 0 12979 281835.375 0.4797627617282314 -2 0.1485748291015625 7 Unmodified _NPYDRGSAFAI_ ENSG00000079785|ENST00000233084|DDX1 64.9267550582149 0.0491502274424461 4 MR{I|L}[DC]{M(Oxidation (M))|F}A{I|L} 8 7 57.516 0.0 0.0 4.7551 0.0 0.0 242.12707717109527 0.0 242.12707717109527 0.0 23.334713493127367 0.0 0.0 0 1.1549471895720984 0.0 0.3054621874040891 1.2302046884880935 MR{I|L}[DC]{M(Oxidation (M))|F}A{I|L} 4.7551 - 3170 1 1.039 127384.0 1.0 8187 4797 12979 HBL1_DMSO_200M_050219_2,12986 HBL1_DMSO_200M_050219_2,12986,NPYDRGSAFAI True True NPYDRGSAFAI 69.003569 605.797351062298 15827515.0 12979.0 ENSG00000079785|ENST00000233084|DDX1 5.797951380411784 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12987 69.015 656.0 227620.0 25 0 15433.0 + -1 QKFFFFFFFFC 11 131 806.3816868699093 1610.7488208066186 2 806.3822509646416 MULTI CID FTMS 0 0 0 12979 220973.265625 1.0 0 0.0 8 Carbamidomethyl (C) _QKFFFFFFFFC(Carbamidomethyl (C))_ REV__ENST00000468830.1_1_7:131163282-131172484:+|nuORF 2.9952420565917617 0.861016188266951 4 NPGG{M(Oxidation (M))|F}GPGGYP{I|L}NTY 15 -1 118.92 0.0 0.0 7.3827 0.0 0.0 0.0 116.05108820133046 116.05108820133046 77.68228392084907 0.0 0.0 0.0 0 3.84556125503638 0.0 1.4916440611282624 0.3252574989159953 NPGG{M(Oxidation (M))|F}GPGGYP{I|L}NTY 7.3827 - 439058 + 1 1.039 106858.9 1.0 8188 4797 12979 HBL1_DMSO_200M_050219_2,12987 HBL1_DMSO_200M_050219_2,12987,QKFFFFFFFFC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12988 69.027 675.0 188980.0 25 0 10087.0 + -1 YPHAVGKNTLLI 12 156 663.3813698339794 0 663.3822509646416 PEAK CID FTMS 0 0 0 12979 175574.765625 0.337935757354777 10 -1.0374603271484375 9 Oxidation (M) _LKSMTFLLM(Oxidation (M))LL_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656-2|DDOST 40.23920728925047 0.1268465486070784 4 {I|L}{M(Oxidation (M))|F}{I|L}[RP]VAH 8 -1 40.131 0.0 0.0 3.0293 0.0 0.0 131.08869181394726 257.0938814752563 388.1825732892036 0.0 0.0 0.0 0.0 0 1.9489700043360187 0.0 0.0 0.6307196863200843 {I|L}{M(Oxidation (M))|F}{I|L}[RP]VAH 3.0293 - 1702 + 1 1.039 93778.5 1.0 8189 4797 12979 HBL1_DMSO_200M_050219_2,12988 HBL1_DMSO_200M_050219_2,12988,LKSMTFLLMLL False False YPHAVGKNTLLI 69.026773 663.382250964642 2080484.5 12979.0 ENSG00000244038|ENST00000602624|DDOST;;nc|ENSG00000244038|P39656|DDOST;;nc|ENSG00000244038|P39656-3|DDOST;;nc|ENSG00000244038|P39656-2|DDOST 4.992970625559489 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12989 69.041 800.0 515100.0 25 0 41940.0 32005 RVIDLRAEL 9 311 362.22180302109706 1083.6435796634912 3 362.5570251345634 MULTI CID FTMS 0 0 0 12979 172320.171875 0.7669842981769773 -1 0.0587005615234375 10 Unmodified _RVIDLRAEL_ ENSG00000130254|ENST00000252542|SAFB2;ENSG00000160633|ENST00000588852|SAFB;ENST00000586934.5_1_19:5623180-5651054:+|nuORF;nc|ENSG00000130254|Q14151-2|SAFB2;nc|ENSG00000160633|Q15424-2|SAFB;nc|ENSG00000160633|Q15424-4|SAFB;nc|ENSG00000160633|Q15424|SAFB 59.36838082759317 0.0264317782606298 4 [RV]{I|L}D{I|L}R 6 3 30.241 0.0 0.0 2.7907 0.0 0.0 0.0 328.1548689527992 328.1548689527992 6.633999019689291 0.0 0.0 0.0 0 1.0044321917401078 1.0969100130080565 0.0 0.6374377229201598 + [RV]{I|L}D{I|L}R 2.7907 + + 1504 1 1.039 323449.8 0.8199999928474426 8190 4797 12979 HBL1_DMSO_200M_050219_2,12989 HBL1_DMSO_200M_050219_2,12989,RVIDLRAEL True True MPKIKMPKI 69.040588 362.557025134563 3720435.0 12979.0 ENSG00000124942|ENST00000378024|AHNAK 2.469458103179932 3.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12990 69.054 800.0 402850.0 25 0 41778.0 28730 PVVEKLLL 8 210 455.8006824941039 909.5868120550078 2 455.8000060915947 MULTI CID FTMS 0 0 0 12979 155231.9375 0.2539687749754795 3 -0.3491592407226562 11 Unmodified _PVVEKLLL_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA 11.114462752807354 0.7467182956244686 4 {[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}DS{I|L} 7 6 35.836 0.0 0.0 3.9398 0.0 0.0 0.0 154.1438548619016 154.1438548619016 21.85686049758212 0.0 0.0 0.0 0 0.0 0.721246399047171 0.5994850021680094 0.1694451763165201 {[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}DS{I|L} 3.9398 - 1763 1 1.039 244585.8 0.9100000262260436 8191 4797 12979 HBL1_DMSO_200M_050219_2,12990 HBL1_DMSO_200M_050219_2,12990,PVVEKLLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12991 69.067 701.0 239810.0 25 0 22641.0 20673 LLRDQDPIVV 10 206 584.340469198293 1166.666385463386 2 584.3415405154228 MULTI CID FTMS 0 0 0 12979 156652.3125 0.7324528530983074 1 -0.13226318359375 12 Unmodified _LLRDQDPIVV_ ENSG00000134262|ENST00000369569|AP4B1;ENST00000484201.5_1_1:114440516-114447658:-|nuORF 39.957323273325 0.1580177220464651 4 {[TV]|[{I|L}S]}NQQPVA{I|L}VV 11 6 + 70.261 0.0 0.0 6.0224 6.0224 83.309 0.0 0.0 0.0 7.386157678055724 9.357285695614364 7.386157678055724 7.386157678055724 0 0.6989700043360187 0.8538719643217619 1.622363747448347 1.4308845489566888 {[TV]|[{I|L}S]}NQQPVA{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}[WR]PVA{I|L}VV;[{I|L}P]GE[RD]VA{I|L}VV;[{I|L}P]W[RD]VA{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}A[RD]PVA{I|L}VV;{[TV]|[{I|L}S]}GGQQPVA{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}AP{[CA]|SS}PVA{I|L}VV;[VS]QQQPVA{I|L}VV;{I|L}{I|L}M[HA]SNA{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}AP[RD]VA{I|L}VV 6.0224;5.3893;5.3644;5.3168;5.2859;5.24;5.1857;5.0039;4.9212;4.8875 -;-;-;-;-;-;-;-;-;- 4760 1 1.039 126728.5 1.0 8192 4797 12979 HBL1_DMSO_200M_050219_2,12991 HBL1_DMSO_200M_050219_2,12991,LLRDQDPIVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12992 69.072 221.0 292850.0 25 0 22998.0 + + 12057 NYFQQANEL 9 108 563.2737448093477 1124.532936685495 2 563.7609741091728 MULTI CID FTMS 0 0 0 -1 0 13 Unmodified _GQERELYCK_ ENSG00000023228|ENST00000233190|NDUFS1;nc|ENSG00000023228|P28331-5|NDUFS1;nc|ENSG00000023228|P28331-4|NDUFS1;nc|ENSG00000023228|P28331-2|NDUFS1;nc|ENSG00000023228|P28331-3|NDUFS1 19.256988751693697 0.3154191944385105 4 [YN]{M(Oxidation (M))|F}QQ 5 -1 34.437 0.0 0.0 3.0623 0.0 0.0 0.0 441.2196181642641 441.2196181642641 10.052725051033065 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YN]{M(Oxidation (M))|F}QQ 3.0623 - 884 1 1.039 54012.8 1.0 8193 4797 12979 HBL1_DMSO_200M_050219_2,12992 HBL1_DMSO_200M_050219_2,12992,GQERELYCK False False NYFQQANEL 69.072241 563.760974109173 387470.71875 12979.0 ENSG00000023228|ENST00000233190|NDUFS1;;nc|ENSG00000023228|P28331-5|NDUFS1;;nc|ENSG00000023228|P28331-4|NDUFS1;;nc|ENSG00000023228|P28331-2|NDUFS1;;nc|ENSG00000023228|P28331-3|NDUFS1 5.734445889790853 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12993 69.086 800.0 134720.0 25 0 45474.0 -1 0 57 1061.401059641431 0 1061.401782214642 PEAK CID FTMS 0 0 0 12979 99600.9765625 1.0 0 0.0 14 4 {I|L}A 2 -1 8.5835 0.0 0.0 0.40473 0.0 0.0 1370.384930706887 563.2588595025999 1933.6437902094867 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A 0.40473 - 35 + 1 1.039 82312.3 0.8500000238418579 8194 4797 12979 HBL1_DMSO_200M_050219_2,12993 HBL1_DMSO_200M_050219_2,12993, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 12994 69.1 800.0 169120.0 25 0 9376.7 38292 TQEWHYRYEDH 11 134 782.3370155708054 1562.6594782084107 2 782.8428832888603 MULTI CID FTMS 0 0 0 12979 92868.3359375 0.4832771976562626 -1 0.0587005615234375 15 Unmodified _TQEWHYRYEDH_ ENSG00000021762|ENST00000263650|OSBPL5;nc|ENSG00000021762|Q9H0X9-2|OSBPL5;nc|ENSG00000021762|Q9H0X9-3|OSBPL5 2.9952420565917617 0.861016188266951 4 E[PS]QTY 6 9 32.427 0.0 0.0 2.0751 0.0 0.0 839.3598290707962 0.0 839.3598290707962 0.0 14.54775773711981 0.0 0.0 0 0.0 0.0 0.805462187404089 0.6747425010840047 E[PS]QTY 2.0751 - 2899 + 1 1.039 96628.2 0.9399999976158142 8195 4797 12979 HBL1_DMSO_200M_050219_2,12994 HBL1_DMSO_200M_050219_2,12994,TQEWHYRYEDH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12995 69.115 800.0 155690.0 25 0 19343.0 + 42451 VTGALKVRTSL 11 175 572.8571863592382 1143.6998197852763 2 572.8577758669853 MULTI CID FTMS 0 0 0 12979 91336.1796875 0.5863421803846768 -3 0.2895126342773437 16 Unmodified _VTGALKVRTSL_ REV__ENST00000229238.4_1_12:6602309-6602420:-|nuORF 16.149105407346934 0.6992268271266642 4 {[TV]|[{I|L}S]}GA{I|L} 5 -1 26.699 0.0 0.0 2.3345 0.0 0.0 0.0 699.4163779730294 699.4163779730294 6.421138293738981 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.7614393726401687 0.0 {[TV]|[{I|L}S]}GA{I|L} 2.3345 + + 879 1 1.039 95741.6 0.9399999976158142 8196 4797 12979 HBL1_DMSO_200M_050219_2,12995 HBL1_DMSO_200M_050219_2,12995,VTGALKVRTSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 12997 69.119 3.6 16546000.0 25 0 2145300.0 + 43848 YFIAPTGHSL 10 71 553.2874576690494 1104.5603624048988 2 553.2880737185478 MULTI CID FTMS 0 0 0 12996 13587067.0 0.814632043186857 1 -0.1074371337890625 1 Unmodified _YFIAPTGHSL_ ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11 68.08070601005525 0.0189984391031388 4 Y{M(Oxidation (M))|F}{I|L}APTGS[H{I|L}] 10 2 + 76.865 0.0 0.0 6.9589 6.9589 94.953 0.0 0.0 0.0 39.01145969223869 1.2941615793476302 1.2941615793476302 76.86480976361331 0 1.1989700043360187 1.3979400086720375 1.2302046884880935 0.0 Y{M(Oxidation (M))|F}{I|L}APTGS[H{I|L}] 6.9589 - 253 + 1 1.051 50689.6 1.0 8197 4798 12996 HBL1_DMSO_200M_050219_2,12997 HBL1_DMSO_200M_050219_2,12997,YFIAPTGHSL True True YFIAPTGHSL 69.119329 553.288073718548 287763232.0 12996.0 nc|ENSG00000125354|Q14141-4|SEPTIN6;;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;;nc|ENSG00000125354|Q14141|SEPTIN6;;ENSG00000125354|ENST00000394610|SEPTIN6;;nc|ENSG00000125354|Q14141-3|SEPTIN6;;ENSG00000138758|ENST00000264893|SEPTIN11 7.533492565155029 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12998 69.121 4.0 14367000.0 25 0 1995100.0 + 10539 FVDPNGKISL 10 74 545.3004370476134 1088.5863211620267 2 545.3005859255791 MULTI CID FTMS 0 0 0 12996 12181386.0 1.0 0 0.0 2 Unmodified _FVDPNGKISL_ ENSG00000107862|ENST00000369983|GBF1;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1 40.23920728925047 0.1550410903091231 4 [{M(Oxidation (M))|F}V]DPN 5 5 41.471 0.0 0.0 3.8096 0.0 0.0 0.0 513.3057955377561 513.3057955377561 9.362271033105287 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.3807196863200844 + [{M(Oxidation (M))|F}V]DPN 3.8096 + + 226 + 1 1.051 54911.2 1.0 8198 4798 12996 HBL1_DMSO_200M_050219_2,12998 HBL1_DMSO_200M_050219_2,12998,FVDPNGKISL False True FVDPNGKISL 69.120508 545.300585925579 271105368.0 12996.0 ENSG00000107862|ENST00000369983|GBF1;;nc|ENSG00000107862|Q92538-1|GBF1;;nc|ENSG00000107862|Q92538-3|GBF1;;nc|ENSG00000107862|Q92538-2|GBF1 5.367530186971028 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 12999 69.122 25.0 2033100.0 25 0 168020.0 10592 FVKHFTSSA 9 70 512.265940803884 1022.517328674568 2 512.2657348513603 MULTI CID FTMS 0 0 0 12996 1721468.625 0.6037586369922276 -1 0.13226318359375 3 Unmodified _FVKHFTSSA_ ENSG00000164074|ENST00000645843|ABHD18;ENST00000473040.6_1_4:128905516-128956965:+|nuORF;nc|ENSG00000164074|Q0P651-2|ABHD18;nc|ENSG00000164074|Q0P651-3|ABHD18;nc|ENSG00000164074|Q0P651-4|ABHD18;nc|ENSG00000164074|Q0P651|ABHD18 20.453626601364224 0.2830276176381075 4 SSA 3 6 26.331 0.0 0.0 2.5751 0.0 0.0 759.4053424458555 0.0 759.4053424458555 0.0 6.893878342760047 0.0 0.0 0 0.4247425010840047 0.0 0.6421590589602533 0.0 + SSA 2.5751 + + 38 + 1 1.051 46387.1 1.0 8199 4798 12996 HBL1_DMSO_200M_050219_2,12999 HBL1_DMSO_200M_050219_2,12999,FVKHFTSSA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13000 69.123 30.0 1325500.0 25 0 194620.0 + 13984 HYYDSTIEL 9 60 570.7639078867431 1139.5132628402862 2 570.7640869021416 MULTI CID FTMS 0 0 0 12996 1405244.375 0.4902820236299262 2 -0.2168960571289062 4 Unmodified _HYYDSTIEL_ ENSG00000100453|ENST00000216341|GZMB;ENST00000526004.1_1_14:25101006-25102204:-|nuORF 50.855029805455786 0.0384952370514206 4 {[WN]|[YH]}{[YD]|[{M(Oxidation (M))|F}M]}{[MG]|[TS]}{I|L}E{I|L} 9 0 + 49.427 0.0 0.0 4.3376 4.3376 81.049 0.0 0.0 0.0 8.994296309019916 32.36416785611311 8.994296309019916 12.503859178250778 0 0.805462187404089 1.3010299956639813 1.0 0.0 + + {[WN]|[YH]}{[YD]|[{M(Oxidation (M))|F}M]}{[MG]|[TS]}{I|L}E{I|L};{[WN]|[YH]}{[YD]|[{M(Oxidation (M))|F}M]}[WP]{M(Oxidation (M))|F}{I|L} 4.3376;3.2403 +;- + 29 1 1.051 38672.4 1.0 8200 4798 12996 HBL1_DMSO_200M_050219_2,13000 HBL1_DMSO_200M_050219_2,13000,HYYDSTIEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13001 69.124 31.0 1571700.0 25 0 194320.0 + 23886 LVLNVNRDG 9 81 500.2837958497906 998.5530387663812 2 500.2834045290947 MULTI CID FTMS 0 0 0 12996 1368506.625 1.0 0 0.0 5 Unmodified _LVLNVNRDG_ REV__ENSG00000056097|ENST00000265069|ZFR 7.910154910731844 0.6385446671287552 4 {I|L} 1 -1 10.089 0.0 0.0 1.0103 0.0 0.0 867.4578829820047 0.0 867.4578829820047 0.0 9.119543704721591 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0103 + + 23 + 1 1.051 43387.4 1.0 8201 4798 12996 HBL1_DMSO_200M_050219_2,13001 HBL1_DMSO_200M_050219_2,13001,LVLNVNRDG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13002 69.125 31.0 864920.0 25 0 53576.0 9781 FNLIAVLQN 9 70 516.296685824842 0 516.2964965701103 PEAK CID FTMS 0 0 0 12996 1178739.5 0.9107753800251368 -1 0.13226318359375 6 Unmodified _FNLIAVLQN_ ENSG00000234469|ENST00000445307|CLDN34 4.3292370932331545 0.3444685223463734 4 G{M(Oxidation (M))|F} 2 9 7.9588 0.0 0.0 0.77227 0.0 0.0 588.3537343432403 235.1192568414672 823.4729911847074 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 0.77227 - 13 + 1 1.051 28700.4 1.0 8202 4798 12996 HBL1_DMSO_200M_050219_2,13002 HBL1_DMSO_200M_050219_2,13002,FNLIAVLQN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13003 69.126 44.0 1448600.0 25 0 142380.0 + 35941 SVPESPEFVRV 11 41 623.3271804643133 1244.6398079954265 2 623.3277465701103 MULTI CID FTMS 0 0 0 12996 1173196.375 0.545038080077454 3 -0.3144989013671875 7 Unmodified _SVPESPEFVRV_ ENSG00000084090|ENST00000337288|STARD7 29.43715596616401 0.4010092210691691 4 [VS]PESPE 7 4 62.211 0.0 0.0 4.9983 0.0 0.0 0.0 516.2947481744749 516.2947481744749 36.5244949760919 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.8494850021680094 0.0 + [VS]PESPE 4.9983 + + 31 + 1 1.051 54194.5 1.0 8203 4798 12996 HBL1_DMSO_200M_050219_2,13003 HBL1_DMSO_200M_050219_2,13003,SVPESPEFVRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13004 69.128 81.0 857220.0 25 0 72384.0 + -1 RCVPNVCL 8 97 509.2539027434162 0 509.2539855837822 PEAK CID FTMS 0 0 0 12996 601694.5 1.0 0 0.0 8 2 Carbamidomethyl (C) _RC(Carbamidomethyl (C))VPNVC(Carbamidomethyl (C))L_ REV__ENSG00000066926|ENST00000262093|FECH;REV__nc|ENSG00000066926|P22830-2|FECH 5.760428011301431 0.5786759180849727 4 A 1 -1 6.9897 0.0 0.0 0.68763 0.0 0.0 247.00571700851373 695.4293306940061 942.4350477025198 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.68763 - 18 + 1 1.051 56872.0 1.0 8204 4798 12996 HBL1_DMSO_200M_050219_2,13004 HBL1_DMSO_200M_050219_2,13004,RCVPNVCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13005 69.131 102.0 595380.0 25 0 75961.0 -1 0 65 905.4157584599526 1808.816963986705 2 905.416552722454 MULTI CID FTMS 0 0 0 12996 521994.75 1.0 0 0.0 9 4 {[DA]|[EG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}TV{I|L} 8 -1 40.807 0.0 0.0 2.256 0.0 0.0 0.0 918.3144975162552 918.3144975162552 19.60917821584665 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 {[DA]|[EG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}TV{I|L} 2.256 - 133 1 1.051 49087.7 1.0 8205 4798 12996 HBL1_DMSO_200M_050219_2,13005 HBL1_DMSO_200M_050219_2,13005, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13006 69.133 120.0 885160.0 25 0 117690.0 + 28703 PVSGGLQALVV 11 129 520.3110012127207 1038.6074494922414 2 520.3138915896416 MULTI CID FTMS 0 0 0 12996 476179.28125 0.300288394557777 -2 0.1909637451171875 10 Unmodified _PVSGGLQALVV_ ENST00000248901.10_1_22:37710662-37711253:+|nuORF 17.44264345198275 0.6723198055858692 4 [{I|L}P]MT[VP]A{I|L}VV 10 6 + 40.084 0.0 0.0 3.8594 3.8594 72.013 0.0 0.0 0.0 0.5542615210282875 8.815957604616816 0.5542615210282875 4.771212547196626 0 1.579689690656103 0.638272163982407 0.0 0.0 [{I|L}P]MT[VP]A{I|L}VV;[{I|L}P]MT{I|L}[PG]{I|L}VV;[{I|L}P]MT[VP]{I|L}AVV;[{I|L}P]G{[DA]|[EG]}[KG]A{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}[QP][KG]A{I|L}VV;[{I|L}P]G{I|L}[KQ]DAVV;{[DA]|[EG]}[KQ][VP]A{I|L}VV;[{I|L}P]MT{I|L}[VP]AVV;[{I|L}P]MT{I|L}A[VP]VV;[VP]A{[DA]|[EG]}[KG]A{I|L}VV 3.8594;3.4001;3.2798;3.1895;3.0924;2.9887;2.8348;2.8204;2.8204;2.7347 -;-;-;-;-;-;-;-;-;- 936 1 1.051 86497.0 1.0 8206 4798 12996 HBL1_DMSO_200M_050219_2,13006 HBL1_DMSO_200M_050219_2,13006,PVSGGLQALVV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13007 69.142 516.0 225240.0 25 0 27494.0 + 4477 DAYALNHTLSV 11 161 602.3038844794894 1202.5932160257787 2 602.3046142458916 MULTI CID FTMS 0 0 0 12996 315918.25 0.0393586774952632 4 -0.4493637084960937 11 Unmodified _DAYALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 85.76441949171179 0.0033696626484081 4 {[DA]|[EG]}Y[RP]PW{I|L}W 9 7 + 59.152 0.0 0.0 4.9187 4.9187 71.889 0.0 0.0 0.0 2.428498823943613 7.108725919983101 2.428498823943613 2.428498823943613 0 1.3807196863200843 1.5228787452803376 1.048455006504028 0.0 {[DA]|[EG]}Y[RP]PW{I|L}W;[HN]T{I|L}AYW{I|L}W;[HN]{I|L}TAYW{I|L}W;[HT]N{I|L}AYW{I|L}W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[RP]PW{I|L}W;{[DA]|[EG]}Y[RP]P{I|L}WW;[HN]T{I|L}AY{I|L}WW;{[DA]|[EG]}YA{I|L}NHRM{I|L};[HN]T{I|L}A{I|L}YWW;[{I|L}T][HN]AYW{I|L}W 4.9187;4.7167;4.5067;4.5045;4.4138;4.3554;4.1534;4.0645;4.0622;3.9852 -;-;-;-;-;-;-;-;-;- 6905 1 1.051 86009.8 1.0 8207 4798 12996 HBL1_DMSO_200M_050219_2,13007 HBL1_DMSO_200M_050219_2,13007,DAYALNHTLSV True True DAYALNHTLSV 69.142108 602.304614245892 203335056.0 12996.0 ENSG00000110777|ENST00000393067|POU2AF1 8.666810035705566 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13008 69.145 139.0 681100.0 25 0 138700.0 24426 MGLLLNKQ 8 99 458.76805691641925 915.5215608996384 2 458.7684509158134 MULTI CID FTMS 0 0 0 12996 314137.625 0.6451758739593171 -1 0.13226318359375 12 Unmodified _MGLLLNKQ_ ENST00000379170.8_2_6:13801602-13807159:-|nuORF 18.13498045792455 0.6430038125133779 4 MG{I|L}{I|L}V[RD]{I|L} 8 4 + 57.064 0.0 0.0 6.2329 6.2329 78.529 0.0 0.0 0.0 44.58973803816591 4.156687756324686 4.156687756324686 3.0102999566398125 0 1.0 0.7958800173440752 0.0 0.0 MG{I|L}{I|L}V[RD]{I|L};MG{I|L}V{I|L}[RD]{I|L};MG{I|L}{I|L}V{[RE]|[WV]}V;MG{I|L}V{I|L}{[RE]|[WV]}V;M[R{I|L}]{I|L}[RD]{I|L};M[R{I|L}]{I|L}{[RE]|[WV]}V 6.2329;5.9041;5.7751;5.4463;1.5232;1.0653 -;-;-;-;-;- 163 + 1 1.051 79133.2 1.0 8208 4798 12996 HBL1_DMSO_200M_050219_2,13008 HBL1_DMSO_200M_050219_2,13008,MGLLLNKQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13009 69.148 142.0 681820.0 25 0 46987.0 + 4954 DGPIAEVHI 9 121 475.7500089470543 949.4854649609084 2 475.7503845095634 MULTI CID FTMS 0 0 0 12996 265682.09375 0.3922418048768155 -2 0.1909637451171875 13 Unmodified _DGPIAEVHI_ ENSG00000197299|ENST00000355112|BLM 48.345845343767074 0.0439967357579942 4 [DG]P{I|L}AEVH{I|L} 9 0 + 64.166 0.0 0.0 6.7579 6.7579 91.693 0.0 0.0 0.0 38.813506577119625 12.98332479720628 12.98332479720628 16.53212513775344 0 0.5242275032520141 0.744727494896694 0.6861818737241735 0.0 + + [DG]P{I|L}AEVH{I|L};[DG]P{I|L}AE[H{I|L}]V;[DG]P{I|L}A[YT]T{I|L};[{I|L}P]GSAAA{I|L}[HN];[{I|L}P]G[QT]A{I|L}[HN];[{I|L}P]GS{[NV]|[RG]}{I|L}[HN];[DG]P{I|L}[HT]PT{I|L};[QA]{I|L}[PS]A{I|L}[HN];[R{M(Oxidation (M))|F}]P{I|L}A{M(Oxidation (M))|F}S{I|L};[PG]TVAAA{I|L}[HN] 6.7579;5.0168;3.9198;3.8828;3.4836;3.1901;2.9101;2.5188;2.3639;2.318 +;-;-;-;-;-;-;-;-;- + 597 + 1 1.051 76811.5 1.0 8209 4798 12996 HBL1_DMSO_200M_050219_2,13009 HBL1_DMSO_200M_050219_2,13009,DGPIAEVHI True True DGPIAEVHI 69.147762 475.750384509563 5346853.0 12996.0 ENSG00000197299|ENST00000355112|BLM 5.481030782063802 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13010 69.159 620.0 455270.0 25 0 46056.0 -1 CRCCWWRRRGT 11 144 827.3777720974732 1652.7409912617463 2 827.3791992068291 MULTI CID FTMS 0 0 0 12996 242836.453125 0.8508949338201535 -1 0.13226318359375 14 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))RC(Carbamidomethyl (C))C(Carbamidomethyl (C))WWRRRGT_ ENST00000265594.8_1_3:182812367-182817305:-|nuORF 1.3295316138638542 0.8688751186870782 4 [DP]E{I|L}AVPP{I|L}E 10 -1 59.087 0.0 0.0 3.5751 0.0 0.0 0.0 589.1749642612766 589.1749642612766 16.41412651557762 0.0 0.0 0.0 0 1.5941876774005248 0.744727494896694 0.8609243748081782 0.0 [DP]E{I|L}AVPP{I|L}E 3.5751 - 11464 1 1.051 189230.1 1.0 8210 4798 12996 HBL1_DMSO_200M_050219_2,13010 HBL1_DMSO_200M_050219_2,13010,CRCCWWRRRGT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13011 69.169 595.0 268760.0 25 0 19754.0 + + 27874 GQVHLFEHI 9 185 540.331055938366 1078.647558943532 2 540.3327514529228 MULTI CID FTMS 0 0 0 12996 214574.453125 0.5732003525828934 -2 0.1909637451171875 15 Unmodified _PLRWRRPV_ ENSG00000163811|ENST00000407426|WDR43 6.354104778181461 0.7857632046190106 4 V 1 -1 10.969 0.0 0.0 1.0169 0.0 0.0 961.568165488257 0.0 961.568165488257 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0169 + + 606 + 1 1.051 126377.7 1.0 8211 4798 12996 HBL1_DMSO_200M_050219_2,13011 HBL1_DMSO_200M_050219_2,13011,PLRWRRPV False False GQVHLFEHI 69.169014 540.332751452923 226665.609375 12996.0 ENSG00000163811|ENST00000407426|WDR43 1.078892449537913 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13012 69.182 722.0 152870.0 25 0 61813.0 -1 0 62 1055.1642688937704 4216.627969708682 4 1055.414111316204 MULTI CID FTMS 0 0 0 12996 201302.75 1.0 0 0.0 16 4 V{M(Oxidation (M))|F}S{M(Oxidation (M))|F}V 5 -1 23.914 0.0 0.0 0.56715 0.0 0.0 3180.1058272299697 454.1919039361938 3634.297731166163 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 V{M(Oxidation (M))|F}S{M(Oxidation (M))|F}V 0.56715 - 139 + 1 1.051 90928.5 1.0 8212 4798 12996 HBL1_DMSO_200M_050219_2,13012 HBL1_DMSO_200M_050219_2,13012, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13013 69.192 615.0 276060.0 25 0 42873.0 + -1 VSLESMEAQSM 11 164 614.2655310738578 1226.5165092145155 2 614.2634765505791 MULTI CID FTMS 0 0 0 12996 197597.578125 0.7980870641466301 -1 0.13226318359375 17 Oxidation (M) _VSLESM(Oxidation (M))EAQSM_ REV__nc|ENSG00000100722|Q6PJT7-11|ZC3H14;REV__nc|ENSG00000100722|Q6PJT7-4|ZC3H14;REV__nc|ENSG00000100722|Q6PJT7-6|ZC3H14 27.22323531849824 0.4529927607131788 4 [VS]{I|L}YG{I|L}{I|L}S 8 -1 46.024 0.0 0.0 3.7524 0.0 0.0 0.0 391.0400789850219 391.0400789850219 13.376622168343827 0.0 0.0 0.0 0 0.7429928190999391 2.0 0.6989700043360187 0.0 [VS]{I|L}YG{I|L}{I|L}S 3.7524 - 1250 + 1 1.051 124596.3 1.0 8213 4798 12996 HBL1_DMSO_200M_050219_2,13013 HBL1_DMSO_200M_050219_2,13013,VSLESMEAQSM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13014 69.196 87.0 468840.0 25 0 32112.0 + 39770 VENVQTVPTK 10 88 557.8083923037211 1113.602231674242 2 557.8091918826103 MULTI CID FTMS 0 0 0 12996 179073.890625 0.4651034691995689 -1 0.13226318359375 18 Unmodified _VENVQTVPTK_ REV__ENSG00000149792|ENST00000279242|MRPL49;REV__ENST00000528529.1_1_11:64889784-64893341:+|nuORF;REV__ENST00000532671.1_1_11:64892850-64893341:+|nuORF;REV__ENST00000534078.1_1_11:64889784-64893341:+|nuORF 38.17557092003332 0.1768326257063233 4 {[QV]|[N{I|L}]|[RA]|[KV]}DR[TA]V 7 -1 26.13 0.0 0.0 2.3464 0.0 0.0 0.0 341.1805757506672 341.1805757506672 9.998197405759797 0.0 0.0 0.0 0 0.5 0.0 0.7302046884880937 1.1643943297944483 {[QV]|[N{I|L}]|[RA]|[KV]}DR[TA]V 2.3464 - 299 1 1.051 37100.3 1.0 8214 4798 12996 HBL1_DMSO_200M_050219_2,13014 HBL1_DMSO_200M_050219_2,13014,VENVQTVPTK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13015 69.209 752.0 282460.0 25 0 42846.0 + -1 YTIDTDNSTVAL 12 162 656.8166411243624 1311.618729315525 2 657.3171264529228 MULTI CID FTMS 0 0 0 12996 185117.703125 0.6633043105730216 -1 0.13226318359375 19 Carbamidomethyl (C) _MDIYVQC(Carbamidomethyl (C))LSAL_ nc|ENSG00000149657|Q9BX40-2|LSM14B;ENSG00000149657|ENST00000279068|LSM14B 13.042465956692816 0.7638483625850725 4 [VP]T{I|L}D{I|L} 6 -1 36.094 0.0 0.0 2.7518 0.0 0.0 0.0 670.2257136720795 670.2257136720795 1.3100883062006972 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5994850021680094 0.0 [VP]T{I|L}D{I|L} 2.7518 - 2213 1 1.051 154564.1 1.0 8215 4798 12996 HBL1_DMSO_200M_050219_2,13015 HBL1_DMSO_200M_050219_2,13015,MDIYVQCLSAL False False YTIDTDNSTVAL 69.208776 656.8161 2377443.75 12996.0 nc|ENSG00000149657|Q9BX40-2|LSM14B;;ENSG00000149657|ENST00000279068|LSM14B 4.269675413767497 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13016 69.222 786.0 216860.0 25 0 15440.0 42457 VTGIPKILHGI 11 215 574.3620894997356 1146.709626066271 2 574.3630859255791 MULTI CID FTMS 0 0 0 12996 162884.25 0.545729355389096 -2 0.1909637451171875 20 Unmodified _VTGIPKILHGI_ ENST00000510994.5_1_3:134196877-134196976:-|nuORF 8.745405648335112 0.8338865417133445 4 SY 2 11 20.846 0.0 0.0 1.8179 0.0 0.0 878.6033502466323 0.0 878.6033502466323 0.0 -3.0857044083669827 -3.0857044083669827 0.0 0 0.0 0.0 0.2887254899964357 0.0 SY 1.8179 - 1726 + 1 1.051 129827.3 1.0 8216 4798 12996 HBL1_DMSO_200M_050219_2,13016 HBL1_DMSO_200M_050219_2,13016,VTGIPKILHGI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13018 69.227 3.1 22516000.0 25 0 7669100.0 + 18844 LASPHSPIL 9 71 467.77147392708576 933.5283949209716 2 467.7717773318291 MULTI CID FTMS 0 0 0 13017 20520840.0 0.8327915539887378 -1 0.1074371337890625 1 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 44.40701690623563 0.0526327925666318 4 [{I|L}A][PS]H[PS]{I|L}{I|L} 9 0 + 43.283 0.0 0.0 4.6365 4.6365 71.405 0.0 0.0 0.0 2.84756513278451 8.278164878957725 2.84756513278451 2.84756513278451 0 0.5 1.154901959985743 1.1382104921644451 0.0 + + [{I|L}A][PS]H[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPS[TA]{I|L}{I|L};[{I|L}A][PS]H{I|L}[PS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA][PS]{I|L}{I|L};[VP][TA]H[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]{I|L}[PS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}T[TA]{I|L}{I|L} 4.6365;4.3315;3.681;3.6507;3.632;3.4173;3.3994;3.3456;3.2316;2.9824 +;-;-;-;-;-;-;-;-;- + 331 1 1.056 58809.9 1.0 8217 4799 13017 HBL1_DMSO_200M_050219_2,13018 HBL1_DMSO_200M_050219_2,13018,LASPHSPIL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13019 69.228 9.4 5898700.0 25 0 909300.0 + 21931 LPPKVSVF 8 67 443.773538906193 885.532524879186 2 443.7736694216728 MULTI CID FTMS 0 0 0 13017 6507421.0 0.3797512373067009 23 -2.2325439453125 2 Unmodified _LPPKVSVF_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 21.74664581756881 0.5868176546531598 4 {I|L}PP 3 5 47.619 0.0 0.0 5.3775 0.0 0.0 0.0 575.3170260065061 575.3170260065061 14.669081132677704 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}PP 5.3775 + + 175 + 1 1.056 49893.4 1.0 8218 4799 13017 HBL1_DMSO_200M_050219_2,13019 HBL1_DMSO_200M_050219_2,13019,LPPKVSVF False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13020 69.229 16.0 2211000.0 25 0 322800.0 + 37128 TGYLNTVTV 9 61 484.2583831501523 966.5022133671048 2 484.2587463259697 MULTI CID FTMS 0 0 0 13017 2912307.0 0.0082862125539093 17 -1.6917037963867188 3 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 25.399314129420983 0.2080152500878129 4 {I|L}CTV 4 6 31.414 0.0 0.0 3.2503 0.0 0.0 532.2847889059703 0.0 532.2847889059703 0.0 16.721675119240516 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}CTV 3.2503 - 39 + 1 1.056 35363.2 1.0 8219 4799 13017 HBL1_DMSO_200M_050219_2,13020 HBL1_DMSO_200M_050219_2,13020,TGYLNTVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13021 69.23 28.0 3207400.0 25 0 375240.0 21484 LPHPLLRL 8 85 320.2117583217455 957.6134455654365 3 320.2113830447197 MULTI CID FTMS 0 0 0 13017 1960853.375 0.2588241581382063 29 -2.897308349609375 4 Unmodified _LPHPLLRL_ ENST00000394963.8_1_12:50494063-50494228:+|nuORF 24.020572477871973 0.5389365498350341 4 {I|L}PPH{I|L}{I|L}R{I|L} 8 2 + 70.505 0.0 0.0 7.3626 7.3626 87.878 0.0 0.0 0.0 59.07834890074963 9.328695041573717 9.328695041573717 7.257724967479866 0 0.6050541008457975 1.3979400086720375 0.0 0.2396518287104437 {I|L}PPH{I|L}{I|L}R{I|L};{I|L}PP{I|L}H{I|L}R{I|L};{I|L}P{I|L}PH{I|L}R{I|L};{I|L}{I|L}PPH{I|L}R{I|L} 7.3626;6.6047;6.2903;4.3279 -;-;-;- 114 + 1 1.056 76404.5 1.0 8220 4799 13017 HBL1_DMSO_200M_050219_2,13021 HBL1_DMSO_200M_050219_2,13021,LPHPLLRL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13022 69.232 52.0 809650.0 25 0 58030.0 + 24197 MAFKQMEQI 9 73 563.2737448093477 1124.532936685495 2 563.2755615115166 MULTI CID FTMS 0 0 0 13017 832267.625 0.6019955848564337 -1 0.1074371337890625 5 Unmodified _MAFKQMEQI_ ENSG00000144834|ENST00000478951|TAGLN3;ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 37.97399986684836 0.0865783450051559 4 {[DS]|[MA]|[CV]|TT}[VS]MAMQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 10 6 + 55.436 0.0 0.0 4.9297 4.9297 80.354 0.0 0.0 0.0 34.25005892125682 9.131806016604358 9.131806016604358 9.164539485499256 0 0.4247425010840047 2.0 0.4247425010840047 0.3807196863200844 {[DS]|[MA]|[CV]|TT}[VS]MAMQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DS]|[MA]|[CV]|TT}[VS]MAM[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QMEAMQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EMAMQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}MEAMQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[W{M(Oxidation (M))|F}]GEAMQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[W{M(Oxidation (M))|F}]GAEMQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DS]|[MA]|[CV]|TT}[VS][W{M(Oxidation (M))|F}]Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[AG]MEAMQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EMAM[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.9297;4.1147;3.6733;3.543;3.4964;3.2072;3.168;2.9956;2.8545;2.7241 -;-;-;-;-;-;-;-;-;- 262 + 1 1.056 39454.7 1.0 8221 4799 13017 HBL1_DMSO_200M_050219_2,13022 HBL1_DMSO_200M_050219_2,13022,MAFKQMEQI True True MAFKQMEQI 69.231674 563.275561511517 9328696.0 13017.0 ENSG00000158710|ENST00000368097|TAGLN2;;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;;nc|ENSG00000158710|P37802-2|TAGLN2;;ENSG00000144834|ENST00000478951|TAGLN3 5.791565577189128 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13023 69.233 39.0 1078000.0 25 0 196520.0 -1 LANFMGHSV 9 75 496.2379134987604 990.4612740643208 2 496.7408630251884 MULTI CID FTMS 0 0 0 13017 796348.375 0.1870872035827031 17 -1.6917037963867188 6 Oxidation (M) _LANFM(Oxidation (M))GHSV_ ENSG00000072657|ENST00000261180|TRHDE 8.593279151180031 0.6146971463335029 4 [KS]YAEM 6 -1 22.14 0.0 0.0 2.2353 0.0 0.0 0.0 278.11457239322505 278.11457239322505 5.686362358410122 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [KS]YAEM 2.2353 - 122 + 1 1.056 42079.6 1.0 8222 4799 13017 HBL1_DMSO_200M_050219_2,13023 HBL1_DMSO_200M_050219_2,13023,LANFMGHSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13024 69.235 110.0 927100.0 25 0 74091.0 21651 LPLHPRII 8 114 479.8140515051801 957.6135500771602 2 479.8136779665947 MULTI CID FTMS 0 0 0 13017 542876.4375 0.2465599779544284 17 -1.6917037963867188 7 Unmodified _LPLHPRII_ nc|ENSG00000186204|Q9HCS2-2|CYP4F12 32.30548876998284 0.3644845974844379 4 {I|L}PPH{I|L}R{I|L}{I|L} 8 2 + 72.049 0.0 0.0 7.5238 7.5238 96.42 0.0 0.0 0.0 55.57110048012923 8.416375079047498 8.416375079047498 72.0492752990156 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPH{I|L}R{I|L}{I|L} 7.5238 - 232 + 1 1.056 86252.5 1.0 8223 4799 13017 HBL1_DMSO_200M_050219_2,13024 HBL1_DMSO_200M_050219_2,13024,LPLHPRII False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13025 69.236 48.0 1330600.0 25 0 96686.0 -1 IGMTRIPVI 9 93 508.3005432258792 1014.5865335185584 2 508.3033019900322 MULTI CID FTMS 0 0 0 13017 517527.75 0.2073702860725061 -5 0.5292129516601562 8 Oxidation (M) _IGM(Oxidation (M))TRIPVI_ ENSG00000140538|ENST00000629765|NTRK3;nc|ENSG00000140538|Q16288-2|NTRK3;nc|ENSG00000140538|Q16288-3|NTRK3;nc|ENSG00000140538|Q16288-4|NTRK3;nc|ENSG00000140538|Q16288-5|NTRK3 13.90604991867851 0.4602628045680013 4 AD{I|L} 3 -1 30.49 0.0 0.0 3.0051 0.0 0.0 697.4484695252121 0.0 697.4484695252121 0.0 15.00508444608478 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 AD{I|L} 3.0051 - 73 1 1.056 55199.1 1.0 8224 4799 13017 HBL1_DMSO_200M_050219_2,13025 HBL1_DMSO_200M_050219_2,13025,IGMTRIPVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13026 69.238 81.0 701700.0 25 0 85958.0 + 21263 LPDTRAVIV 9 88 492.2989127937813 982.5832726543626 2 492.2994567751884 MULTI CID FTMS 0 0 0 13017 477679.5625 0.0644483664466666 4 -0.4045791625976562 9 Unmodified _LPDTRAVIV_ REV__ENSG00000114270|ENST00000681320|COL7A1;REV__nc|ENSG00000114270|Q02388-2|COL7A1 32.78568957990786 0.1150597335874693 4 {I|L}PD 3 -1 47.58 0.0 0.0 4.8423 0.0 0.0 0.0 654.3952728059088 654.3952728059088 30.35700126741633 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {I|L}PD 4.8423 + + 78 + 1 1.056 48499.1 1.0 8225 4799 13017 HBL1_DMSO_200M_050219_2,13026 HBL1_DMSO_200M_050219_2,13026,LPDTRAVIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13027 69.242 191.0 542260.0 25 0 111340.0 + 20133 LKNQIWGLL 9 113 542.8279644400536 1083.6413759469071 2 542.8280517458916 MULTI CID FTMS 0 0 0 13017 356183.625 0.4441162220923221 1 -0.1094589233398437 10 Unmodified _LKNQIWGLL_ REV__ENSG00000196924|ENST00000369850|FLNA;REV__nc|ENSG00000196924|P21333-2|FLNA 24.67388899826682 0.2172451872415813 4 {I|L}[RV]D{I|L}M[KP]{I|L} 9 -1 + 33.65 0.0 0.0 3.1053 3.1053 64.199 0.0 0.0 0.0 20.885584838783203 2.006594505464186 2.006594505464186 1.5051499783199134 0 0.5 0.0 0.0 0.4247425010840047 {I|L}[RV]D{I|L}M[KP]{I|L};[VG][{I|L}V]D{I|L}M[KP]{I|L} 3.1053;2.9664 -;- 82 + 1 1.056 83113.4 1.0 8226 4799 13017 HBL1_DMSO_200M_050219_2,13027 HBL1_DMSO_200M_050219_2,13027,LKNQIWGLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13028 69.245 169.0 358260.0 25 0 39294.0 24278 MAPRTVLL 8 94 450.7700398607845 899.5255267883689 2 450.7706176638603 MULTI CID FTMS 0 0 0 13017 338521.15625 0.0800904518983977 6 -0.5979766845703125 11 Unmodified _MAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 12.531546534597751 0.7257836412119636 4 [YV]AV[HA]K{I|L} 8 7 + 21.604 0.0 0.0 2.4017 2.4017 67.025 0.0 0.0 0.0 5.150312510170778 2.4915968663680133 2.4915968663680133 3.539171939081168 0 0.0 0.0 0.0 0.0 [YV]AV[HA]K{I|L};[R{I|L}][TP]VCV{I|L};[YV]VA[HA]K{I|L};[R{I|L}][TP]VAM{I|L};[R{I|L}][TP]AMV{I|L};[R{I|L}][TP]AVM{I|L} 2.4017;2.0083;1.7324;1.5361;1.3389;0.86676 -;-;-;-;-;- 102 + 1 1.056 52355.0 1.0 8227 4799 13017 HBL1_DMSO_200M_050219_2,13028 HBL1_DMSO_200M_050219_2,13028,MAPRTVLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13029 69.255 567.0 430970.0 25 0 25420.0 -1 0 143 931.444720990769 1860.874889048338 2 931.4446899294852 MULTI CID FTMS 0 0 0 13017 346384.90625 1.0 0 0.0 12 4 [QP]STA{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][DV]QP 13 -1 51.02 0.0 0.0 2.7417 0.0 0.0 0.0 367.190341058015 367.190341058015 21.52391923435589 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.646591250700361 0.0 [QP]STA{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][DV]QP 2.7417 - 6922 1 1.056 161282.4 1.0 8228 4799 13017 HBL1_DMSO_200M_050219_2,13029 HBL1_DMSO_200M_050219_2,13029, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13030 69.265 532.0 431030.0 25 0 22144.0 + 16896 KIIDETMAQL 10 177 581.3116002525371 1160.608647571874 2 581.3140746951103 MULTI CID FTMS 0 0 0 13017 328483.09375 0.2450227426933917 -2 0.2397003173828125 13 Unmodified _KIIDETMAQL_ ENSG00000072501|ENST00000322213|SMC1A 80.6760300276096 0.0165137828474802 4 {I|L}{I|L}KDETMAQ{I|L} 10 2 + 89.153 0.0 0.0 7.6816 7.6816 85.12 0.0 0.0 0.0 4.137342758552691 16.53212513775344 4.137342758552691 4.137342758552691 0 0.6861818737241735 0.9208187539523752 2.4489700043360187 0.0 {I|L}{I|L}KDETMAQ{I|L};[K{I|L}]{I|L}DETMAQ{I|L};{I|L}{I|L}KDETMA[AG]{I|L};{I|L}{I|L}KDTEMAQ{I|L};{[QN]|[E{I|L}]|[KN]}DT{I|L}KMAQ{I|L};[K{I|L}]{I|L}DETMA[AG]{I|L};[K{I|L}]{I|L}DTEMAQ{I|L};{[QN]|[E{I|L}]|[KN]}D[K{I|L}]TMAQ{I|L};{[QN]|[E{I|L}]|[KN]}AM[RV]MAQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]ETMAQ{I|L} 7.6816;7.3251;6.892;6.7321;6.5671;6.5355;6.3756;6.3122;6.2693;6.2025 -;+;-;-;-;-;-;-;-;- + 9679 1 1.056 169414.7 1.0 8229 4799 13017 HBL1_DMSO_200M_050219_2,13030 HBL1_DMSO_200M_050219_2,13030,KIIDETMAQL True True KIIDETMAQL 69.264607 581.31407469511 21489342.0 13017.0 ENSG00000072501|ENST00000322213|SMC1A 5.524614651997884 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13031 69.274 535.0 482530.0 25 0 37725.0 + -1 EQCDMKLLAV 10 180 611.7937263123164 1221.572899691433 2 611.7950317263603 MULTI CID FTMS 0 0 0 13017 311581.5 0.2020080769128532 -3 0.29840087890625 14 Carbamidomethyl (C),Oxidation (M) _EQC(Carbamidomethyl (C))DM(Oxidation (M))KLLAV_ REV__ENSG00000183742|ENST00000400331|MACC1 25.399314129420983 0.3980215340001851 4 {[QS]|[NT]}AD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{I|L}VA{I|L} 11 -1 + 43.074 0.0 0.0 3.5261 3.5261 72.138 0.0 0.0 0.0 4.726216766418965 -6.808597292925107 -6.808597292925107 5.822850897382331 0 0.6351518780601924 0.0 0.8516784832448856 0.7984550065040281 {[QS]|[NT]}AD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{I|L}VA{I|L};{[QS]|[NT]}AC(Carbamidomethyl (C))EV{M(Oxidation (M))|F}VVA{I|L};{[QS]|[NT]}AD{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}VVA{I|L};{[QS]|[NT]}AD{[CA]|SS}V{M(Oxidation (M))|F}VVA{I|L};{[QS]|[NT]}AC(Carbamidomethyl (C))E[MT]{I|L}VA{I|L};{[QS]|[NT]}AD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}VVA{I|L};{[QS]|[NT]}AD{[CA]|SS}[MT]{I|L}VA{I|L};{[MG]|[TS]}EE{I|L}[RN]{[CT]|[{M(Oxidation (M))|F}G]}G{I|L};{[MG]|[TS]}EE{I|L}[RN]{[CT]|[{M(Oxidation (M))|F}G]}VA;{[QS]|[NT]}AD[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]VV{I|L}A{I|L} 3.5261;3.0494;2.9085;2.758;2.635;2.6041;2.3435;2.3344;2.1983;2.1526 -;-;-;-;-;-;-;-;-;- 5472 1 1.056 186653.3 1.0 8230 4799 13017 HBL1_DMSO_200M_050219_2,13031 HBL1_DMSO_200M_050219_2,13031,EQCDMKLLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13032 69.279 252.0 478950.0 25 0 55277.0 -1 FPFYGKPMRI 10 98 424.55842091939263 1270.653433358378 3 424.5583984255791 MULTI CID FTMS 0 0 0 13017 297620.09375 0.3395534121616033 17 -1.6917037963867188 15 Oxidation (M) _FPFYGKPM(Oxidation (M))RI_ ENSG00000125870|ENST00000246071|SNRPB2 14.95716135407024 0.5965753712453801 4 KGY{M(Oxidation (M))|F}PE 6 -1 44.954 0.0 0.0 3.5378 0.0 0.0 531.284889769664 0.0 531.284889769664 0.0 25.400990676322905 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 KGY{M(Oxidation (M))|F}PE 3.5378 - 256 1 1.056 101223.5 1.0 8231 4799 13017 HBL1_DMSO_200M_050219_2,13032 HBL1_DMSO_200M_050219_2,13032,FPFYGKPMRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13033 69.289 597.0 284690.0 25 0 18434.0 + 30884 RIPEEILGKV 10 183 577.3503912750933 1152.6862296169866 2 577.3500854372978 MULTI CID FTMS 0 0 0 13017 242561.796875 1.0 0 0.0 16 Unmodified _RIPEEILGKV_ ENSG00000126934|ENST00000262948|MAP2K2;ENST00000597008.5_1_19:4100806-4102439:-|nuORF 44.391923383255 0.1130657680819667 4 [VS]VN[QP]{I|L}{I|L}GKV 11 6 + 66.931 0.0 0.0 5.8066 5.8066 83.949 0.0 0.0 0.0 10.043648054024509 14.190166918179637 10.043648054024509 9.128498242811013 0 1.4876954943324543 1.3979400086720375 0.1643943297944484 0.2742275032520141 [VS]VN[QP]{I|L}{I|L}GKV;[VS]VGG[QP]{I|L}{I|L}GKV;[KG]{I|L}YY{I|L}{I|L}GKV;[EP][R{I|L}]E{I|L}{I|L}GKV;[R{I|L}][EP]E{I|L}{I|L}GKV;[{I|L}P]{[RE]|[WV]}E{I|L}{I|L}GKV;[DV][KG][QP]{I|L}{I|L}GKV;[KG][DV][QP]{I|L}{I|L}GKV;{[TV]|[{I|L}S]}[QA][QP]{I|L}{I|L}GKV;[EP]E[R{I|L}]{I|L}{I|L}GKV 5.8066;5.0146;4.9352;4.5712;4.3997;4.3712;4.3177;4.2486;4.2482;4.1572 -;-;-;-;+;-;-;-;-;- + 1127 1 1.056 129541.4 1.0 8232 4799 13017 HBL1_DMSO_200M_050219_2,13033 HBL1_DMSO_200M_050219_2,13033,RIPEEILGKV True True RIPEEILGKV 69.28918 577.350085437298 11567507.0 13017.0 ENST00000597008.5_1_19:4100806-4102439:-|nuORF;;ENSG00000126934|ENST00000262948|MAP2K2 5.876058896382649 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13034 69.297 346.0 367030.0 25 0 19156.0 + 30798 RIFKDFMHV 9 138 398.2148377971772 1191.6226839917315 3 398.2151977419853 MULTI CID FTMS 0 0 0 13017 229018.640625 1.0 0 0.0 17 Unmodified _RIFKDFMHV_ ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A 51.41523569358685 0.0372669606867193 4 [R{I|L}]{M(Oxidation (M))|F}KD{M(Oxidation (M))|F}MHV 9 0 + 57.558 0.0 0.0 4.8302 4.8302 83.554 0.0 0.0 0.0 17.97365229832028 44.79414014453251 17.97365229832028 14.564856298445576 0 1.2658715643802765 1.3010299956639813 0.0 0.3807196863200844 + + [R{I|L}]{M(Oxidation (M))|F}KD{M(Oxidation (M))|F}MHV;[R{I|L}]{M(Oxidation (M))|F}KD{[ET]|[MV]}{[QG]|[NA]}V;[R{I|L}]{M(Oxidation (M))|F}KD{M(Oxidation (M))|F}N[PG]V;[R{I|L}][YN]{I|L}{M(Oxidation (M))|F}MHV;[R{I|L}]Q[YV]{M(Oxidation (M))|F}MHV;[R{I|L}][YN]{I|L}{[ET]|[MV]}{M(Oxidation (M))|F}H;[R{I|L}]Q[YV]{[ET]|[MV]}{M(Oxidation (M))|F}H;[R{I|L}][YN]{I|L}{M(Oxidation (M))|F}N[RP];[R{I|L}]Q[YV]{M(Oxidation (M))|F}N[RP];{[QD]|[EN]|[WG]|[KD]|[RS]}[R{M(Oxidation (M))|F}]{I|L}{M(Oxidation (M))|F}MHV 4.8302;3.608;3.5902;2.7141;2.6794;1.0807;1.046;0.95914;0.9244;0.76531 +;-;-;-;-;-;-;-;-;- + 328 1 1.056 103194.4 1.0 8233 4799 13017 HBL1_DMSO_200M_050219_2,13034 HBL1_DMSO_200M_050219_2,13034,RIFKDFMHV True True RIFKDFMHV 69.296599 398.215197741985 2052072.0 13017.0 nc|ENSG00000196504|O75400-3|PRPF40A;;ENSG00000196504|ENST00000545856|PRPF40A;;nc|ENSG00000196504|O75400|PRPF40A;;nc|ENSG00000196504|O75400-2|PRPF40A 7.89682404200236 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13035 69.31 786.0 152060.0 25 0 6586.5 9923 FPFYGKPMRI 10 143 636.3340445544504 1270.6535361757008 2 636.3348876833916 MULTI CID FTMS 0 0 0 13017 171083.6875 0.3757903989000877 13 -1.3443603515625 18 Oxidation (M) _FPFYGKPM(Oxidation (M))RI_ ENSG00000125870|ENST00000246071|SNRPB2 41.8396318013385 0.1381409678234242 4 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 7 5 67.036 0.0 0.0 5.2757 0.0 0.0 0.0 415.1751803033813 415.1751803033813 19.604067140633127 0.0 0.0 0.0 0 1.6382104921644451 2.0 0.0 0.0 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 5.2757 - 1353 + 1 1.056 96335.5 1.0 8234 4799 13017 HBL1_DMSO_200M_050219_2,13035 HBL1_DMSO_200M_050219_2,13035,FPFYGKPMRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13036 69.324 800.0 341380.0 25 0 12644.0 -1 RCHRRRRRCCC 11 162 866.9066694051579 1731.7987858771155 2 867.8976318240166 MULTI CID FTMS 0 0 0 13017 165717.328125 0.022987889565491 27 -2.663414001464844 19 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DADQ[DV]N{M(Oxidation (M))|F}{I|L}Q 15 -1 + 84.464 0.0 0.0 4.8772 4.8772 67.621 0.0 0.0 0.0 6.05827027871338 6.05827027871338 6.05827027871338 0.2802872360024366 0 0.7059771852360797 0.0 0.9559771852360796 2.34669816197406 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DADQ[DV]N{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DADQ[DV]GG{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DADQ[RD]G{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}[VS][HS]QDAD{I|L}NP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DWQ[DV]N{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}WDQ[DV]N{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DWQ[DV]GG{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}WDQ[DV]GG{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}WDQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DWQ[RD]G{M(Oxidation (M))|F}{I|L}Q 4.8772;4.8611;4.8551;4.5274;4.4909;4.4909;4.4736;4.4736;4.4688;4.4688 -;-;-;-;-;-;-;-;-;- 37230 + 1 1.056 182655.3 0.959999978542328 8235 4799 13017 HBL1_DMSO_200M_050219_2,13036 HBL1_DMSO_200M_050219_2,13036,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13037 69.332 365.0 426870.0 25 0 37533.0 + 38265 TPWQPPTV 8 164 463.2431287016038 924.4717044700076 2 463.2431213259697 MULTI CID FTMS 0 0 0 13017 159403.46875 0.2252683217309953 -5 0.5292129516601562 20 Unmodified _TPWQPPTV_ ENSG00000143476|ENST00000366991|DTL 78.14939416004806 0.0999748067387998 4 [TP]WQPPVT 8 2 + 49.891 0.0 0.0 5.3967 5.3967 77.99 0.0 0.0 0.0 12.970140425305154 4.771212547196626 4.771212547196626 4.771212547196626 0 0.8812033112643842 1.5228787452803376 0.5629529932484498 0.0 [TP]WQPPVT;[TP]WQPPTV;[TP]W[AG]PPVT;[TP]A{[QD]|[EN]|[WG]|[KD]|[RS]}PPVT;[TP]P[WQ]PVT;[WP]QTPPVT;[TP]PA{I|L}N{I|L}{[CP]|[EA]};[TP]W[AG]PPTV;[TP]A{[QD]|[EN]|[WG]|[KD]|[RS]}PPTV;[TP]P[WQ]PTV 5.3967;4.8806;4.3949;4.354;4.2514;3.9938;3.9786;3.8787;3.8379;3.7353 -;+;-;-;-;-;-;-;-;- + 731 1 1.056 123124.7 1.0 8236 4799 13017 HBL1_DMSO_200M_050219_2,13037 HBL1_DMSO_200M_050219_2,13037,TPWQPPTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13039 69.336 3.0 15100000.0 25 0 1541800.0 + 26185 NQFPGFKEV 9 72 533.2719200115437 1064.5292870898872 2 533.2725097537041 MULTI CID FTMS 0 0 0 13038 17438610.0 0.6998659954802069 2 -0.2324676513671875 1 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 23.78978130925829 0.2284941198415988 4 GGQ{M(Oxidation (M))|F} 4 8 32.555 0.0 0.0 3.0581 0.0 0.0 0.0 672.3360552385778 672.3360552385778 9.851821769904632 0.0 0.0 0.0 0 1.0 1.3979400086720375 0.0 0.75 GGQ{M(Oxidation (M))|F} 3.0581 - 120 1 1.062 39066.8 1.0 8237 4800 13038 HBL1_DMSO_200M_050219_2,13039 HBL1_DMSO_200M_050219_2,13039,NQFPGFKEV False True NQFPGFKEV 69.336225 533.272509753704 2014342560.0 13038.0 ENSG00000125870|ENST00000246071|SNRPB2;;ENST00000407763.2_1_6:149433147-149433330:-|nuORF;;ENSG00000077312|ENST00000243563|SNRPA 8.475675582885742 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13040 69.337 7.1 6932600.0 25 0 739900.0 + 39374 VAHQQLIQI 9 73 525.3089213988906 1048.603289864581 2 525.3093749880791 MULTI CID FTMS 0 0 0 13038 6222924.0 0.9301625906099366 1 -0.0976028442382812 2 Unmodified _VAHQQLIQI_ ENSG00000167986|ENST00000301764|DDB1 26.88365393820708 0.1891292719743517 4 QQ{I|L}{I|L}Q{I|L} 6 3 32.268 0.0 0.0 3.0772 0.0 0.0 307.16414076972814 0.0 307.16414076972814 0.0 15.841218823962109 0.0 0.0 0 0.6237125054200234 0.0 0.0 0.0 + QQ{I|L}{I|L}Q{I|L} 3.0772 + + 96 1 1.062 44634.0 1.0 8238 4800 13038 HBL1_DMSO_200M_050219_2,13040 HBL1_DMSO_200M_050219_2,13040,VAHQQLIQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13041 69.339 13.0 3655600.0 25 0 240570.0 + 28852 AQIKELEEL 9 91 536.7977009178835 1071.580848902567 2 536.7979003787041 MULTI CID FTMS 0 0 0 13038 3596687.0 0.4925029515776939 -1 0.1094589233398437 3 Unmodified _QAIEKLEEI_ ENSG00000137497|ENST00000393695|NUMA1;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1 53.40400417844725 0.0329064971918313 4 {[QN]|[E{I|L}]|[KN]}EK{[NV]|[RG]}VE{I|L} 9 5 + 54.865 0.0 0.0 5.12 5.12 71.071 0.0 0.0 0.0 12.381452602161067 24.2255342974913 12.381452602161067 1.5186375580366729 0 0.1923877696554315 0.8538719643217619 1.1549471895720984 0.0 {[QN]|[E{I|L}]|[KN]}EK{[NV]|[RG]}VE{I|L};{[QN]|[E{I|L}]|[KN]}EKE{I|L}[QA]{I|L};{[QN]|[E{I|L}]|[KN]}EVV{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}KE{[NV]|[RG]}VE{I|L};{[QN]|[E{I|L}]|[KN]}KEE{I|L}[QA]{I|L};{[QN]|[E{I|L}]|[KN]}K[QA]{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}EK{I|L}[QA]E{I|L};{[QN]|[E{I|L}]|[KN]}EK{I|L}E[QA]{I|L};{[QN]|[E{I|L}]|[KN]}EKRRE{I|L};{[QN]|[E{I|L}]|[KN]}EKERR{I|L} 5.12;4.9783;4.957;4.8444;4.7027;4.6813;4.6748;4.5331;4.5155;4.5155 -;-;-;-;-;-;-;-;-;- 1055 1 1.062 42884.2 1.0 8239 4800 13038 HBL1_DMSO_200M_050219_2,13041 HBL1_DMSO_200M_050219_2,13041,QAIEKLEEI True True AQIKELEEL 69.338583 536.797900378704 131557792.0 13038.0 ENSG00000137497|ENST00000393695|NUMA1;;nc|ENSG00000137497|Q14980-2|NUMA1;;nc|ENSG00000137497|Q14980-3|NUMA1;;nc|ENSG00000137497|Q14980-4|NUMA1 5.305112202962239 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13042 69.34 28.0 1785100.0 25 0 208680.0 + 41195 VPEEMFREV 9 64 568.2764175298477 1134.5382821264952 2 568.2770873904228 MULTI CID FTMS 0 0 0 13038 1594247.125 1.0 0 0.0 4 Unmodified _VPEEMFREV_ ENSG00000157212|ENST00000404141|PAXIP1 29.84058131909904 0.1515068451768857 4 VPEEM{M(Oxidation (M))|F}{[RE]|[WV]}V 9 0 + 68.363 0.0 0.0 6.0256 6.0256 91.153 0.0 0.0 0.0 40.91543601944042 2.982385737599202 2.982385737599202 61.02690962719839 0 0.3252574989159953 1.5228787452803376 0.4247425010840047 0.3807196863200844 + + VPEEM{M(Oxidation (M))|F}{[RE]|[WV]}V;[{I|L}T][HC]M{M(Oxidation (M))|F}{[RE]|[WV]}V 6.0256;0.64659 +;- + 49 + 1 1.062 47723.4 1.0 8240 4800 13038 HBL1_DMSO_200M_050219_2,13042 HBL1_DMSO_200M_050219_2,13042,VPEEMFREV False True VPEEMFREV 69.339761 568.277087390423 13701076.0 13038.0 ENSG00000157212|ENST00000404141|PAXIP1 8.07788340250651 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13043 69.341 44.0 1087900.0 25 0 264230.0 + 27843 PLQSQYIV 8 82 474.2635225309403 946.5124921286806 2 474.2637817263603 MULTI CID FTMS 0 0 0 13038 879115.25 1.0 0 0.0 5 Unmodified _PLQSQYIV_ ENST00000268989.7_1_17:2283201-2283462:+|nuORF 40.44857923139169 0.2267865117615937 4 [{I|L}A][PS]NAY{I|L}V 9 4 + 43.668 0.0 0.0 4.6135 4.6135 72.889 0.0 0.0 0.0 3.52182518111362 9.889917747712644 3.52182518111362 3.52182518111362 0 0.5994850021680094 1.0969100130080565 0.75 0.6861818737241735 [{I|L}A][PS]NAY{I|L}V;[{I|L}P]{[SA]|[TG]}NAY{I|L}V;[{I|L}A][PS]NYA{I|L}V;{[QN]|[E{I|L}]|[KN]}T{I|L}PY{I|L}V;[{I|L}P]{[SA]|[TG]}NYA{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]Y{I|L}V;{[SA]|[TG]}[{I|L}P]NAY{I|L}V;[{I|L}A][PS]GGAY{I|L}V;[{I|L}A][PS]GGYA{I|L}V;[QA][SG]{I|L}PY{I|L}V 4.6135;4.2414;4.2113;3.8821;3.8392;3.1281;2.9905;2.9157;2.9157;2.9035 -;-;-;-;-;-;-;-;-;- 208 1 1.062 42173.2 1.0 8241 4800 13038 HBL1_DMSO_200M_050219_2,13043 HBL1_DMSO_200M_050219_2,13043,PLQSQYIV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13044 69.342 62.0 1117100.0 25 0 113550.0 + 36627 TASDKILIV 9 87 480.2915927669576 958.5686326007152 2 480.2922851443291 MULTI CID FTMS 0 0 0 13038 700295.6875 0.7397485586770693 -2 0.2168960571289062 6 Unmodified _TASDKILIV_ ENSG00000118965|ENST00000281405|WDR35;ENST00000445063.5_1_2:20113365-20153734:-|nuORF;nc|ENSG00000118965|Q9P2L0|WDR35 29.081581746732265 0.1611639662936252 4 [TA]AS{I|L}[TA]{I|L}{I|L}V 10 4 + 45.213 0.0 0.0 4.7167 4.7167 68.179 0.0 0.0 0.0 18.29812217439504 3.226052125589973 3.226052125589973 0.796896906561031 0 0.5994850021680094 2.0 0.7614393726401688 0.0 [TA]AS{I|L}[TA]{I|L}{I|L}V;[TA]AS{I|L}{I|L}[TA]{I|L}V;[TA]AS[TA]{I|L}{I|L}{I|L}V;[TA]A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L}V;[{I|L}P][YE]{I|L}{I|L}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L}[TA]{I|L}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L}{I|L}[TA]{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}S[TA]{I|L}{I|L}{I|L}V;[NP]PH{I|L}[R{I|L}]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}{I|L}V 4.7167;4.6336;3.9044;3.537;2.8078;2.2629;2.1798;1.4506;1.1572;1.0888 -;-;-;-;-;-;-;-;-;- 241 1 1.062 57802.7 1.0 8242 4800 13038 HBL1_DMSO_200M_050219_2,13044 HBL1_DMSO_200M_050219_2,13044,TASDKILIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13045 69.351 494.0 421730.0 25 0 82486.0 -1 0 70 1107.113263601947 3318.317961406041 3 1107.448413074017 MULTI CID FTMS 0 0 0 13038 573325.4375 0.1122243207480506 -3 0.3491592407226562 7 4 {M(Oxidation (M))|F}G 2 -1 8.5835 0.0 0.0 0.25867 0.0 0.0 1797.6113706851409 1313.600582337785 3111.2119530229256 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.25867 - 167 + 1 1.062 169940.9 1.0 8243 4800 13038 HBL1_DMSO_200M_050219_2,13045 HBL1_DMSO_200M_050219_2,13045, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13046 69.354 159.0 535040.0 25 0 49909.0 + 26155 NPYDRGSAFAI 11 118 605.7962618425759 1209.5779707519516 2 605.7968017458916 MULTI CID FTMS 0 0 0 13038 563182.5 0.9586943851779064 1 -0.0976028442382812 8 Unmodified _NPYDRGSAFAI_ ENSG00000079785|ENST00000233084|DDX1 57.24910588100465 0.0803095280301687 4 [NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[YD]|[{M(Oxidation (M))|F}M]}N{M(Oxidation (M))|F}A{I|L} 10 5 + 61.334 0.0 0.0 5.0707 5.0707 73.752 0.0 0.0 0.0 4.4796193460306455 31.58030623340529 4.4796193460306455 3.0102999566398125 0 1.6549471895720984 1.0969100130080565 0.0 1.4361818737241734 [NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[YD]|[{M(Oxidation (M))|F}M]}N{M(Oxidation (M))|F}A{I|L};[NP][RD][YT]N{M(Oxidation (M))|F}A{I|L};NPY{[HG]|PP}[YE]{M(Oxidation (M))|F}A{I|L};[{I|L}A][C(Carbamidomethyl (C))H][HQ]N{M(Oxidation (M))|F}A{I|L};[NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}NA{I|L};[EP]{[QN]|[E{I|L}]|[KN]}{[YD]|[{M(Oxidation (M))|F}M]}N{M(Oxidation (M))|F}A{I|L};[NP][RD][YT]{M(Oxidation (M))|F}NA{I|L};[EP]QQ[YT]N{M(Oxidation (M))|F}A{I|L};[NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H[C(Carbamidomethyl (C))Q]NA{I|L};[NP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H[C(Carbamidomethyl (C))K]NA{I|L} 5.0707;4.8218;4.3551;4.1908;4.1195;4.1022;3.8707;3.8534;3.7251;3.7251 -;-;-;-;-;-;-;-;-;- 779 1 1.062 65669.8 1.0 8244 4800 13038 HBL1_DMSO_200M_050219_2,13046 HBL1_DMSO_200M_050219_2,13046,NPYDRGSAFAI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13047 69.357 129.0 521300.0 25 0 51206.0 + 36194 SVVSPSSFENV 11 113 576.2819164997713 1150.5492800663426 2 576.2823364138603 MULTI CID FTMS 0 0 0 13038 525945.0625 0.1368446843784127 -4 0.4078598022460937 9 Unmodified _SVVSPSSFENV_ ENSG00000070831|ENST00000656825|CDC42;nc|ENSG00000289694|P60953-1|CDC42 38.17557092003332 0.2405003631267018 4 [DV]G{M(Oxidation (M))|F}ESD 7 8 43.822 0.0 0.0 3.8088 0.0 0.0 0.0 398.2333370333926 398.2333370333926 3.886985268507459 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.0044321917401078 0.0 [DV]G{M(Oxidation (M))|F}ESD 3.8088 - 1019 1 1.062 57582.3 1.0 8245 4800 13038 HBL1_DMSO_200M_050219_2,13047 HBL1_DMSO_200M_050219_2,13047,SVVSPSSFENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13048 69.361 179.0 355480.0 25 0 38797.0 -1 NMEPYCCRETL 11 95 736.800386494403 1471.586220055606 2 736.8020507693291 MULTI CID FTMS 0 0 0 13038 500614.78125 0.226486374742674 -3 0.3491592407226562 10 2 Carbamidomethyl (C) _NMEPYC(Carbamidomethyl (C))C(Carbamidomethyl (C))RETL_ ENSG00000136014|ENST00000258499|USP44 3.2813086475875832 0.8596665074481906 4 AT{I|L} 3 -1 32.351 0.0 0.0 2.1984 0.0 0.0 1168.4056913464246 0.0 1168.4056913464246 0.0 7.97315590503672 0.0 0.0 0 0.4247425010840047 0.0 0.7302046884880937 0.0 AT{I|L} 2.1984 - 403 + 1 1.062 52949.2 1.0 8246 4800 13038 HBL1_DMSO_200M_050219_2,13048 HBL1_DMSO_200M_050219_2,13048,NMEPYCCRETL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13049 69.364 181.0 528270.0 25 0 85555.0 41756 VPTVSLVP 8 109 406.2486249125759 810.4826968919517 2 406.2489196658134 MULTI CID FTMS 0 0 0 13038 488693.0625 0.0594576529150693 6 -0.6369400024414062 11 Unmodified _VPTVSLVP_ ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8 2.889219685676258 0.8067950007271085 4 V 1 7 11.42 0.0 0.0 1.409 0.0 0.0 693.4031813663643 0.0 693.4031813663643 0.0 1.4199832818260028 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.409 + + 20 + 1 1.062 81489.8 1.0 8247 4800 13038 HBL1_DMSO_200M_050219_2,13049 HBL1_DMSO_200M_050219_2,13049,VPTVSLVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13050 69.366 114.0 644330.0 25 0 37515.0 + 30182 QVVDEKLPGL 10 126 549.3135527749149 1096.6125526166295 2 549.3139526247978 MULTI CID FTMS 0 0 0 13038 387253.3125 1.0 0 0.0 12 Unmodified _QVVDEKLPGL_ ENSG00000104763|ENST00000637790|ASAH1;nc|ENSG00000104763|Q13510-2|ASAH1 21.53697664764585 0.484802182336468 4 {[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VD 7 7 34.001 0.0 0.0 3.1006 0.0 0.0 0.0 367.19834314517817 367.19834314517817 21.237169151620243 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.6505149978319906 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VD 3.1006 - 1141 + 1 1.062 61392.5 1.0 8248 4800 13038 HBL1_DMSO_200M_050219_2,13050 HBL1_DMSO_200M_050219_2,13050,QVVDEKLPGL False True QVVDEKLPGL 69.36649 549.313952624798 3283602.5 13038.0 ENSG00000104763|ENST00000637790|ASAH1;;nc|ENSG00000104763|Q13510-2|ASAH1 3.316703955332438 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13051 69.37 208.0 380140.0 25 0 87135.0 -1 TVFTDHMLTV 10 110 590.2890217415567 1178.5634905499132 2 590.2889282107353 MULTI CID FTMS 0 0 0 13038 379048.8125 0.7030218395563929 -3 0.3491592407226562 13 Oxidation (M) _TVFTDHM(Oxidation (M))LTV_ ENSG00000060982|ENST00000261192|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;nc|ENSG00000060982|P54687-5|BCAT1 38.17557092003332 0.1768326257063233 4 {[{M(Oxidation (M))|F}H]|[RQ]}DT{M(Oxidation (M))|F}{I|L}TV{[TV]|[{I|L}S]} 10 -1 + 46.973 0.0 0.0 3.9856 3.9856 73.456 0.0 0.0 0.0 5.779550148593486 4.884381005764311 4.884381005764311 5.779550148593486 0 0.3807196863200844 0.0 0.4247425010840047 0.3054621874040891 {[{M(Oxidation (M))|F}H]|[RQ]}DT{M(Oxidation (M))|F}{I|L}TV{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[WY]TY{[TV]|[{I|L}S]};{[{M(Oxidation (M))|F}H]|[RQ]}DT{I|L}{M(Oxidation (M))|F}TV{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[WY]TV[YT];{[{M(Oxidation (M))|F}H]|[RQ]}DT{M(Oxidation (M))|F}{I|L}S{I|L}{[TV]|[{I|L}S]};{[{M(Oxidation (M))|F}H]|[RQ]}DT{I|L}{M(Oxidation (M))|F}S{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[WD][QA]T{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[Y{I|L}][YC(Carbamidomethyl (C))]T{I|L};[{M(Oxidation (M))|F}V]AYC{I|L}TY{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}V]T[WY]TY{[TV]|[{I|L}S]} 3.9856;3.4952;3.4748;3.1722;3.1144;2.6035;2.5314;2.382;2.3644;2.3285 -;-;-;-;-;-;-;-;-;- 496 1 1.062 66726.2 1.0 8249 4800 13038 HBL1_DMSO_200M_050219_2,13051 HBL1_DMSO_200M_050219_2,13051,TVFTDHMLTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13052 69.372 89.0 416890.0 25 0 31874.0 + 38569 TTAAARGIQV 10 90 494.2824682458808 986.5503835585616 2 494.2817260622978 MULTI CID FTMS 0 0 0 13038 318804.375 0.5831833797761575 -5 0.4977340698242187 14 Unmodified _TTAAARGIQV_ REV__ENST00000358024.7_1_1:205197673-205197814:+|nuORF 6.723162845929126 0.6955379296933136 4 V 1 -1 14.604 0.0 0.0 1.4803 0.0 0.0 869.4708756623686 0.0 869.4708756623686 0.0 2.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4803 + + 71 + 1 1.062 34115.5 1.0 8250 4800 13038 HBL1_DMSO_200M_050219_2,13052 HBL1_DMSO_200M_050219_2,13052,TTAAARGIQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13053 69.374 72.0 836660.0 25 0 85823.0 45360 YSRPTLSAL 9 104 504.27999202486376 1006.5454311165277 2 504.2816345095634 MULTI CID FTMS 0 0 0 13038 293748.875 0.0150864269400705 30 -3.0712661743164062 15 Unmodified _YSRPTLSAL_ ENSG00000239961|ENST00000291759|LILRA4;nc|ENSG00000239961|P59901-2|LILRA4 18.1463463914782 0.3454829746528889 4 S{I|L} 2 7 16.938 0.0 0.0 1.6828 0.0 0.0 788.4182318751198 0.0 788.4182318751198 0.0 0.7403126772771884 0.0 0.0 0 0.0 0.0 0.1989700043360188 0.0 S{I|L} 1.6828 - 259 + 1 1.062 50810.8 1.0 8251 4800 13038 HBL1_DMSO_200M_050219_2,13053 HBL1_DMSO_200M_050219_2,13053,YSRPTLSAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13054 69.384 592.0 429700.0 25 0 35722.0 + 9450 FLCQYDTVSI 10 184 594.781294404275 1187.5480358753498 2 594.7817870974541 MULTI CID FTMS 0 0 0 13038 272854.8125 0.140877897520301 -3 0.3491592407226562 16 Unmodified _FLCQYDTVSI_ L1M3_dup291|chr1:173794566-173795729:+|1.2948332452242903|0.3648644439828962|1.83|48.0|51|1|anti-sense 22.736283301280096 0.4578556481593033 4 [DN]SVDP{[QD]|[EN]|[WG]|[KD]|[RS]}VS{I|L} 11 7 + 69.346 0.0 0.0 5.8394 5.8394 85.98 0.0 0.0 0.0 7.367585652254192 11.303337684950073 7.367585652254192 9.379839358585867 0 0.805462187404089 0.0 2.1861818737241734 0.0 [DN]SVDP{[QD]|[EN]|[WG]|[KD]|[RS]}VS{I|L};[DN]SVDP[VG]WS{I|L};[DN]WDP{[QD]|[EN]|[WG]|[KD]|[RS]}VS{I|L};[DN]SVDP{[QD]|[EN]|[WG]|[KD]|[RS]}VTV;[DN]DWP{[QD]|[EN]|[WG]|[KD]|[RS]}VS{I|L};[DN]SVDPKDW{I|L};[DN]SVDP[VG]WTV;[DN]WDP{[QD]|[EN]|[WG]|[KD]|[RS]}VTV;[C(Carbamidomethyl (C))S][PA]DP{[QD]|[EN]|[WG]|[KD]|[RS]}VS{I|L};[DN]DWP{[QD]|[EN]|[WG]|[KD]|[RS]}VTV 5.8394;5.0495;4.9651;4.8876;4.5311;4.391;4.0977;4.0132;3.8561;3.5793 -;-;-;-;-;-;-;-;-;- 8477 + 1 1.062 186970.1 1.0 8252 4800 13038 HBL1_DMSO_200M_050219_2,13054 HBL1_DMSO_200M_050219_2,13054,FLCQYDTVSI False True False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 13055 69.398 800.0 456960.0 25 0 48010.0 + 43938 YGIPRLEKI 9 285 363.5538069134845 1087.6395913406534 3 363.5530883669853 MULTI CID FTMS 0 0 0 13038 239310.359375 0.9645724291043 1 -0.0976028442382812 17 Unmodified _YGIPRLEKI_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 35.61225514009592 0.0995432151795903 4 YG{I|L}{I|L}{[RE]|[WV]}PK{I|L} 9 3 + 56.38 0.0 0.0 5.1837 5.1837 75.237 0.0 0.0 0.0 19.995207847977007 8.736087309087424 8.736087309087424 3.517033029090633 0 0.2887254899964357 0.9208187539523752 0.8494850021680094 1.0418727718234408 YG{I|L}{I|L}{[RE]|[WV]}PK{I|L};Y{I|L}G{I|L}{[RE]|[WV]}PK{I|L};YG{I|L}PR{[QN]|[E{I|L}]|[KN]}K{I|L};YG{I|L}{I|L}{[RE]|[WV]}P{I|L}K;Y{I|L}GPR{[QN]|[E{I|L}]|[KN]}K{I|L};Y{I|L}G{I|L}{[RE]|[WV]}P{I|L}K;YG{I|L}PR{[QN]|[E{I|L}]|[KN]}{I|L}K;YG{I|L}P[VG]{[QN]|[E{I|L}]|[KN]}K{I|L};Y{I|L}GPR{[QN]|[E{I|L}]|[KN]}{I|L}K;Y{I|L}GP[VG]{[QN]|[E{I|L}]|[KN]}K{I|L} 5.1837;4.8604;4.5621;4.3805;4.2388;4.0572;3.7589;3.7155;3.4356;3.3921 -;-;+;-;-;-;-;-;-;- + 613 + 1 1.062 286152.2 0.9300000071525574 8253 4800 13038 HBL1_DMSO_200M_050219_2,13055 HBL1_DMSO_200M_050219_2,13055,YGIPRLEKI True True YGIPRLEKI 69.398288 363.553088366985 3402349.25 13038.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 2.7163941065470376 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13056 69.402 107.0 677640.0 25 0 50571.0 + 43610 YAFPKAVSV 9 101 491.2735327336244 980.5325125340488 2 491.2733642458916 MULTI CID FTMS 0 0 0 13038 218061.921875 0.4628860030410722 -1 0.1094589233398437 18 Unmodified _YAFPKAVSV_ ENSG00000141526|ENST00000582743|SLC16A3;ENST00000579572.1_1_17:80193878-80195110:+|nuORF;ENST00000581642.1_1_17:80193878-80194172:+|nuORF;ENST00000584781.5_1_17:80193878-80195055:+|nuORF 24.020572477871973 0.2255576514309169 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}R{M(Oxidation (M))|F}A 6 5 38.862 0.0 0.0 3.9633 0.0 0.0 0.0 222.12488733463127 222.12488733463127 22.10531903759588 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}R{M(Oxidation (M))|F}A 3.9633 - 363 + 1 1.062 61983.9 1.0 8254 4800 13038 HBL1_DMSO_200M_050219_2,13056 HBL1_DMSO_200M_050219_2,13056,YAFPKAVSV False True YAFPKAVSV 69.401729 491.273364245892 4686395.0 13038.0 ENST00000584781.5_1_17:80193878-80195055:+|nuORF;;ENSG00000141526|ENST00000582743|SLC16A3;;ENST00000579572.1_1_17:80193878-80195110:+|nuORF;;ENST00000581642.1_1_17:80193878-80194172:+|nuORF 5.471446673075358 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13057 69.416 800.0 229530.0 25 0 10614.0 + 45514 YTSPEEIDAQL 11 180 633.2981229668507 1264.5816930005012 2 633.2982055544853 MULTI CID FTMS 0 0 0 13038 164302.34375 1.0 0 0.0 19 Unmodified _YTSPEEIDAQL_ ENSG00000106244|ENST00000350498|PDAP1 29.081581746732265 0.4093582134107448 4 {[TV]|[{I|L}S]}[HM]DA{M(Oxidation (M))|F}DA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 11 7 + 34.789 0.0 0.0 2.751 2.751 63.747 0.0 0.0 0.0 1.6616480031888443 1.6616480031888443 1.6616480031888443 1.6616480031888443 0 0.0 2.0 0.791235974569971 0.0 {[TV]|[{I|L}S]}[HM]DA{M(Oxidation (M))|F}DA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[NS]ATENE{I|L}{M(Oxidation (M))|F}Q{I|L};{[TV]|[{I|L}S]}[HM]DA{M(Oxidation (M))|F}W{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[TV]|[{I|L}S]}[HM]DS[YT]RR;{[TV]|[{I|L}S]}D[HM]A{M(Oxidation (M))|F}DA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[EP]E{I|L}DA{M(Oxidation (M))|F}DA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[TV]|[{I|L}S]}D[HM]A{M(Oxidation (M))|F}W{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[TV]|[{I|L}S]}[HM]SD[YT]RR;{[TV]|[{I|L}S]}D[HM]S[YT]RR;{[TV]|[{I|L}S]}D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M{NN|[MP]|[D{I|L}]|[EV]}RR 2.751;2.6196;2.6083;2.5761;2.513;2.3844;2.3703;2.3526;2.3381;2.336 -;-;-;-;-;-;-;-;-;- 6211 1 1.062 148447.9 0.9800000190734864 8255 4800 13038 HBL1_DMSO_200M_050219_2,13057 HBL1_DMSO_200M_050219_2,13057,YTSPEEIDAQL False True YTSPEEIDAQL 69.415567 633.298205554485 1719405.75 13038.0 ENSG00000106244|ENST00000350498|PDAP1 4.454776763916016 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13058 69.429 800.0 186360.0 25 0 13521.0 + -1 CQWDVCMLGLI 11 160 697.8176721996774 1393.6207914661547 2 697.8185912966728 MULTI CID FTMS 0 0 0 13038 148518.359375 0.136555468743984 -3 0.3491592407226562 20 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))QWDVC(Carbamidomethyl (C))MLGLI_ REV__ENSG00000129003|ENST00000644861|VPS13C;REV__ENST00000559119.1_1_15:62146658-62148655:-|nuORF;REV__nc|ENSG00000129003|Q709C8-3|VPS13C 12.240655878213236 0.7805268987462184 4 [AG]SAD{[QS]|[NT]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SQ{I|L}G{I|L} 14 -1 + 39.637 0.0 0.0 2.8441 2.8441 70.162 0.0 0.0 0.0 5.480134518931791 5.383191622491793 5.383191622491793 5.480134518931791 0 1.048455006504028 1.2218487496163564 0.5078792628615163 0.3807196863200844 [AG]SAD{[QS]|[NT]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SQ{I|L}G{I|L};{[QS]|[NT]}AD{[QS]|[NT]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SQ{I|L}G{I|L};[AG]ASD{[QS]|[NT]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SQ{I|L}G{I|L};[QA]SD{[QS]|[NT]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SQ{I|L}G{I|L};[YN][CS][C(Carbamidomethyl (C))H]{I|L}SQ{I|L}G{I|L};{[{M(Oxidation (M))|F}D]|MM}V{[C(Carbamidomethyl (C))G]|[NC]}{[DA]|[EG]}{I|L}SQ{I|L}G{I|L};{[{M(Oxidation (M))|F}D]|MM}V{[C(Carbamidomethyl (C))G]|[NC]}W[KP]C{I|L}G{I|L};{[{M(Oxidation (M))|F}D]|MM}[C(Carbamidomethyl (C))R]W[KP]C{I|L}G{I|L};{[{M(Oxidation (M))|F}D]|MM}V{[C(Carbamidomethyl (C))G]|[NC]}{I|L}{[DA]|[EG]}SQ{I|L}G{I|L} 2.8441;2.4509;2.132;1.5512;0.88826;0.828;0.7834;0.74098;0.70164 -;-;-;-;-;-;-;-;- 1279 1 1.062 110674.1 0.8999999761581421 8256 4800 13038 HBL1_DMSO_200M_050219_2,13058 HBL1_DMSO_200M_050219_2,13058,CQWDVCMLGLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13060 69.434 29.0 1737500.0 25 0 170970.0 10593 FVKHFTSSA 9 71 512.265940803884 1022.517328674568 2 512.2659179568291 MULTI CID FTMS 0 0 0 13059 1638602.125 0.5746954496847526 2 -0.1975173950195312 1 Unmodified _FVKHFTSSA_ ENSG00000164074|ENST00000645843|ABHD18;ENST00000473040.6_1_4:128905516-128956965:+|nuORF;nc|ENSG00000164074|Q0P651-2|ABHD18;nc|ENSG00000164074|Q0P651-3|ABHD18;nc|ENSG00000164074|Q0P651-4|ABHD18;nc|ENSG00000164074|Q0P651|ABHD18 20.453626601364224 0.2830276176381075 4 SSA 3 6 28.333 0.0 0.0 2.7709 0.0 0.0 759.4055865864805 0.0 759.4055865864805 0.0 8.895592501361218 0.0 0.0 0 0.4247425010840047 0.0 0.6382104921644451 0.0 + SSA 2.7709 + + 32 + 1 1.071 43904.6 1.0 8257 4801 13059 HBL1_DMSO_200M_050219_2,13060 HBL1_DMSO_200M_050219_2,13060,FVKHFTSSA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13061 69.435 34.0 1334100.0 25 0 141820.0 + 10540 FVDPNGKISL 10 83 545.3004370476134 1088.5863211620267 2 545.3000366091728 MULTI CID FTMS 0 0 0 13059 856226.6875 0.0702897591045879 3 -0.308837890625 2 Unmodified _FVDPNGKISL_ ENSG00000107862|ENST00000369983|GBF1;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1 43.77239144664712 0.1177314611616471 4 [{M(Oxidation (M))|F}V]DPN 5 5 42.408 0.0 0.0 3.8957 0.0 0.0 0.0 513.3056734674436 513.3056734674436 13.83793209229129 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.4247425010840047 0.0 + [{M(Oxidation (M))|F}V]DPN 3.8957 + + 284 + 1 1.071 41679.9 1.0 8258 4801 13059 HBL1_DMSO_200M_050219_2,13061 HBL1_DMSO_200M_050219_2,13061,FVDPNGKISL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13062 69.436 16.0 3288300.0 25 0 356550.0 + 25627 NFPEKISSL 9 70 517.7787940831879 1033.5430352331755 2 517.7799560427666 MULTI CID FTMS 0 0 0 13059 1729993.0 0.7084085465946858 -4 0.4467620849609375 3 Unmodified _NFPEKISSL_ ENST00000420672.1_1_2:179278757-179278808:+|nuORF 22.736283301280096 0.2418982879461534 4 [YV][RK]EP 6 8 26.929 0.0 0.0 2.6055 0.0 0.0 0.0 258.0870055558036 258.0870055558036 1.8740810491244984 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.5 0.0 [YV][RK]EP 2.6055 - 72 1 1.071 46967.6 1.0 8259 4801 13059 HBL1_DMSO_200M_050219_2,13062 HBL1_DMSO_200M_050219_2,13062,NFPEKISSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13063 69.438 49.0 1293100.0 25 0 196490.0 + + 16174 GKADAPVALVV 11 96 520.3110012127207 1038.6074494922414 2 520.3120605349541 MULTI CID FTMS 0 0 0 13059 1204781.125 0.7597596200953198 1 -0.1348648071289062 4 Unmodified _IVDLVWPVV_ ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-4|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;ENSG00000006744|ENST00000338034|ELAC2;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 19.438996006549623 0.310492472477042 4 A{I|L}VV 4 -1 23.94 0.0 0.0 2.305 0.0 0.0 638.3389759748062 0.0 638.3389759748062 0.0 9.336068845642204 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 A{I|L}VV 2.305 - 98 1 1.071 51190.6 1.0 8260 4801 13059 HBL1_DMSO_200M_050219_2,13063 HBL1_DMSO_200M_050219_2,13063,IVDLVWPVV False False GKADAPVALVV 69.437572 520.312060534954 30287298.0 13059.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 4.626240571339925 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13064 69.439 31.0 1353700.0 25 0 189160.0 + 23187 LSRSSVTHL 9 72 500.2837958497906 998.5530387663812 2 500.2829467654228 MULTI CID FTMS 0 0 0 13059 1022366.3125 0.7470671269128858 3 -0.308837890625 5 Unmodified _LSRSSVTHL_ REV__ENSG00000116127|ENST00000613296|ALMS1;REV__nc|ENSG00000116127|Q8TCU4-2|ALMS1;REV__nc|ENSG00000116127|Q8TCU4-3|ALMS1 4.3292370932331545 0.7635526921153418 4 {I|L} 1 -1 10.713 0.0 0.0 1.0729 0.0 0.0 867.4578372056375 0.0 867.4578372056375 0.0 9.744237387763093 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0729 + + 23 + 1 1.071 37128.0 1.0 8261 4801 13059 HBL1_DMSO_200M_050219_2,13064 HBL1_DMSO_200M_050219_2,13064,LSRSSVTHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13065 69.44 33.0 1901300.0 25 0 351930.0 + -1 RYMFSRPF 8 81 552.2764805063838 1102.5384080795675 2 552.2764770388603 MULTI CID FTMS 0 0 0 13059 909199.5 0.8463120607563406 -1 0.0976028442382812 6 Oxidation (M) _LM(Oxidation (M))HWTRFP_ ENST00000494303.1_1_4:165933772-165933994:-|nuORF;ENST00000473558.5_1_13:27827913-27828439:+|nuORF;ENSG00000122026|ENST00000311549|RPL21 10.183394434864962 0.7604730176254005 4 RYV 3 -1 16.77 0.0 0.0 1.521 0.0 0.0 0.0 681.2854708307249 681.2854708307249 -1.222732882756354 0.0 -1.222732882756354 0.0 0 0.25 0.0 0.0 0.0 RYV 1.521 - 374 + 1 1.071 52783.1 1.0 8262 4801 13059 HBL1_DMSO_200M_050219_2,13065 HBL1_DMSO_200M_050219_2,13065,LMHWTRFP False False RYMFSRPF 69.439931 552.27647703886 15726004.0 13059.0 ENST00000494303.1_1_4:165933772-165933994:-|nuORF;;ENST00000473558.5_1_13:27827913-27828439:+|nuORF;;ENSG00000122026|ENST00000311549|RPL21 1.0606674949328103 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13066 69.442 101.0 695420.0 25 0 113990.0 + -1 FSGGGYMQCL 10 99 539.7198729587901 1077.42519298438 2 539.7200195193291 MULTI CID FTMS 0 0 0 13059 592349.375 0.2782011868473892 -2 0.207061767578125 7 Oxidation (M) _FSGGGYM(Oxidation (M))QCL_ REV__ENSG00000163817|ENST00000358525|SLC6A20;REV__nc|ENSG00000163817|Q9NP91-2|SLC6A20 14.838274106304384 0.5985701837916485 4 [VG][HD]N 5 -1 18.925 0.0 0.0 1.7565 0.0 0.0 0.0 552.1779145022114 552.1779145022114 0.3207499751527329 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3494850021680094 [VG][HD]N 1.7565 - 202 1 1.071 59643.8 1.0 8263 4801 13059 HBL1_DMSO_200M_050219_2,13066 HBL1_DMSO_200M_050219_2,13066,FSGGGYMQCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13067 69.444 112.0 698070.0 25 0 37839.0 + 43561 WYQRVYQSL 9 103 621.816357804735 1241.61816267627 2 621.8169433474541 MULTI CID FTMS 0 0 0 13059 506903.5625 0.3853827476099063 -1 0.0976028442382812 8 Unmodified _WYQRVYQSL_ ENSG00000126267|ENST00000649813|COX6B1 160.51597146486608 0.0010047773005512 4 [YQ]WRVYQS{I|L} 9 2 + 58.695 0.0 0.0 4.7273 4.7273 68.895 0.0 0.0 0.0 1.244302919998212 2.465846974768482 1.244302919998212 1.244302919998212 0 1.024227503252014 0.0 0.0 1.860924374808178 [YQ]WRVYQS{I|L};{[TV]|[{I|L}S]}QQ[Y{I|L}]YQS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}QYV{[WT]|[RM]}QS{I|L};[YQ]WRVY[AG]S{I|L};{[TV]|[{I|L}S]}QQ[Y{I|L}]Y[AG]S{I|L};{[TV]|[{I|L}S]}[AG]Q[Y{I|L}]YQS{I|L};{[TV]|[{I|L}S]}Q[AG][Y{I|L}]YQS{I|L};{[QS]|[NT]}{I|L}Q[Y{I|L}]YQS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}QYV{[WT]|[RM]}[AG]S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[AG]YV{[WT]|[RM]}QS{I|L} 4.7273;4.627;4.1937;3.9856;3.8889;3.8889;3.8889;3.6586;3.4556;3.4556 -;-;-;-;-;-;-;-;-;- 893 1 1.071 65912.5 1.0 8264 4801 13059 HBL1_DMSO_200M_050219_2,13067 HBL1_DMSO_200M_050219_2,13067,WYQRVYQSL True True WYQRVYQSL 69.444479 621.816943347454 23391514.0 13059.0 ENSG00000126267|ENST00000649813|COX6B1 8.39832337697347 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13068 69.448 151.0 559270.0 25 0 32973.0 + 17134 KLHEYFPEM 9 107 597.2868536227504 1192.5591543123007 2 597.2886840701103 MULTI CID FTMS 0 0 0 13059 468867.8125 0.1878154569433349 -3 0.3144989013671875 9 Unmodified _KLHEYFPEM_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 61.60191391372663 0.0251951588191061 4 [EP]MA{I|L}[Y{I|L}]PEM 10 6 + 72.457 0.0 0.0 6.0758 6.0758 81.575 0.0 0.0 0.0 5.536049848239344 16.53212513775344 5.536049848239344 5.536049848239344 0 1.2302046884880935 1.3979400086720375 0.7302046884880937 0.0 [EP]MA{I|L}[Y{I|L}]PEM;[TP]{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}{I|L}KPEM;[EP]MAAA{I|L}G[VG]{M(Oxidation (M))|F}M;{[YC]|[HE]}Y{M(Oxidation (M))|F}{I|L}KPEM;[YE]H{M(Oxidation (M))|F}{I|L}KPEM;[TP]{[QC]|[C(Carbamidomethyl (C))A]}[K{I|L}]{M(Oxidation (M))|F}PEM;[EP]MAA{I|L}AG[VG]{M(Oxidation (M))|F}M;{[VA]|[{I|L}G]}A{[WN]|[YH]}[Y{I|L}]PEM;[K{I|L}]HEY{M(Oxidation (M))|F}PEM;[EP]MA{I|L}AAG[VG]{M(Oxidation (M))|F}M 6.0758;5.6116;5.1366;5.1067;4.8543;4.7965;4.7366;4.6045;4.5976;4.5889 -;-;-;-;-;-;-;-;+;- + 2345 1 1.071 70579.4 1.0 8265 4801 13059 HBL1_DMSO_200M_050219_2,13068 HBL1_DMSO_200M_050219_2,13068,KLHEYFPEM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13069 69.449 61.0 1051300.0 25 0 85704.0 28596 PVAAATHLLL 10 121 503.3095237632807 1004.6044945933612 2 503.3102905154228 MULTI CID FTMS 0 0 0 13059 423298.59375 0.7371602236042692 -2 0.207061767578125 10 Unmodified _PVAAATHLLL_ ENST00000227266.9_1_11:88029387-88033712:-|nuORF 25.399314129420983 0.3980215340001851 4 {I|L}{I|L}Q{[YD]|[{M(Oxidation (M))|F}M]}K{I|L}{I|L} 8 8 + 23.689 0.0 0.0 2.358 2.358 71.798 0.0 0.0 0.0 8.027194418743804 -1.5051499783199065 -1.5051499783199065 7.781512503836437 0 0.5484550065040281 1.6989700043360187 0.0 0.0 {I|L}{I|L}Q{[YD]|[{M(Oxidation (M))|F}M]}K{I|L}{I|L};{I|L}{I|L}M{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{I|L}{I|L};{I|L}{I|L}[AG]{[YD]|[{M(Oxidation (M))|F}M]}K{I|L}{I|L};{I|L}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]VK{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{I|L}]VK{I|L}{I|L} 2.358;1.5835;1.4361;1.4082;0.083284 -;-;-;-;- 179 1 1.071 50190.8 1.0 8266 4801 13059 HBL1_DMSO_200M_050219_2,13069 HBL1_DMSO_200M_050219_2,13069,PVAAATHLLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13070 69.451 103.0 667240.0 25 0 195870.0 + 24427 MGLLLNKQ 8 76 458.76805691641925 915.5215608996384 2 458.7680236697197 MULTI CID FTMS 0 0 0 13059 319604.0625 0.656402843640222 2 -0.1975173950195312 11 Unmodified _MGLLLNKQ_ ENST00000379170.8_2_6:13801602-13807159:-|nuORF 18.13498045792455 0.6430038125133779 4 MG{I|L}{I|L}V{[RE]|[WV]}V 8 4 + 55.883 0.0 0.0 6.104 6.104 77.264 0.0 0.0 0.0 43.40874491738596 1.726307269461742 1.726307269461742 2.6884531229258 0 1.0 0.9208187539523752 0.0 0.0 MG{I|L}{I|L}V{[RE]|[WV]}V;MG{I|L}{I|L}V[RD]{I|L};[{I|L}P][YK]{I|L}[WP] 6.104;5.8103;0.81529 -;-;- 63 + 1 1.071 59611.0 1.0 8267 4801 13059 HBL1_DMSO_200M_050219_2,13070 HBL1_DMSO_200M_050219_2,13070,MGLLLNKQ False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13071 69.465 800.0 221140.0 25 0 22483.0 + -1 MPPPVGMV 8 119 827.3777720974732 1652.7409912617463 2 827.3773071169853 MULTI CID FTMS 0 0 0 13059 186837.890625 0.6546768927506195 2 -0.1975173950195312 12 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))RC(Carbamidomethyl (C))C(Carbamidomethyl (C))WWRRRGT_ nc|ENSG00000084070|Q8WU79-2|SMAP2;ENSG00000084070|ENST00000372718|SMAP2;nc|ENSG00000084070|Q8WU79-3|SMAP2 1.3295316138638542 0.8688751186870782 4 [DP]E{I|L}GPEDAS 10 -1 54.237 0.0 0.0 3.2816 0.0 0.0 0.0 639.2971236023692 639.2971236023692 29.36472156877329 0.0 0.0 0.0 0 0.0 0.0 1.2376954943324543 0.0 [DP]E{I|L}GPEDAS 3.2816 - 6951 1 1.071 121839.5 0.959999978542328 8268 4801 13059 HBL1_DMSO_200M_050219_2,13071 HBL1_DMSO_200M_050219_2,13071,CRCCWWRRRGT False False MPPPVGMV 69.465043 827.377307116985 5898972.5 13059.0 nc|ENSG00000084070|Q8WU79-2|SMAP2;;ENSG00000084070|ENST00000372718|SMAP2;;nc|ENSG00000084070|Q8WU79-3|SMAP2 1.2971276541550951 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13072 69.479 800.0 307540.0 25 0 21416.0 + 2823 AVAAVLTQV 9 215 436.2667264796749 870.5189000261498 2 436.2674438357353 MULTI CID FTMS 0 0 0 13059 164231.0625 0.59280972888574 -2 0.207061767578125 13 Unmodified _AVAAVLTQV_ ENSG00000147955|ENST00000277010|SIGMAR1;ENST00000378892.5_1_9:34637493-34637721:-|nuORF;ENST00000497006.1_1_9:34637208-34637655:-|nuORF;nc|ENSG00000147955|Q99720-2|SIGMAR1;nc|ENSG00000147955|Q99720-3|SIGMAR1;nc|ENSG00000147955|Q99720-4|SIGMAR1;nc|ENSG00000147955|Q99720-5|SIGMAR1 56.541270873467816 0.0279970378729908 4 {[VA]|[{I|L}G]}AAV{I|L} 6 3 42.382 0.0 0.0 4.8686 0.0 0.0 0.0 343.16340621194985 343.16340621194985 20.11657092044061 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + {[VA]|[{I|L}G]}AAV{I|L} 4.8686 + + 980 1 1.071 187711.4 0.7900000214576721 8269 4801 13059 HBL1_DMSO_200M_050219_2,13072 HBL1_DMSO_200M_050219_2,13072,AVAAVLTQV True True AVAAVLTQV 69.478858 436.267443835735 5629761.5 13059.0 nc|ENSG00000147955|Q99720-5|SIGMAR1;;nc|ENSG00000147955|Q99720-4|SIGMAR1;;ENSG00000147955|ENST00000277010|SIGMAR1;;ENST00000497006.1_1_9:34637208-34637655:-|nuORF;;nc|ENSG00000147955|Q99720-2|SIGMAR1;;ENST00000378892.5_1_9:34637493-34637721:-|nuORF;;nc|ENSG00000147955|Q99720-3|SIGMAR1 5.623902161916097 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13073 69.485 340.0 291580.0 25 0 38561.0 -1 0 127 380.1912156522832 379.1839391856832 1 380.1907836794853 MULTI CID FTMS 0 0 0 13059 171895.34375 0.1989360783359512 -7 0.7362747192382812 14 4 P 1 -1 13.979 0.0 0.0 3.6867 0.0 0.0 264.1200257719121 0.0 264.1200257719121 0.0 5.303489201768059 0.0 0.0 0 0.0 0.0 0.0 0.0 P 3.6867 - 18 + 1 1.071 81061.4 1.0 8270 4801 13059 HBL1_DMSO_200M_050219_2,13073 HBL1_DMSO_200M_050219_2,13073, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13074 69.499 800.0 133660.0 25 0 6626.2 + -1 DGIAIQQI 8 110 857.9041507075278 1713.7937484818556 2 857.9015991091728 MULTI CID FTMS 0 0 0 13059 127631.171875 1.0 0 0.0 15 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000103657|ENST00000443617|HERC1 0.0 0.8751479354844584 4 [MN]PN{I|L}NACMQQ{I|L}D 13 -1 80.162 0.0 0.0 4.6775 0.0 0.0 0.0 238.1201113336547 238.1201113336547 39.79551358178067 0.0 0.0 0.0 0 0.2887254899964357 1.3010299956639813 0.8851518780601924 0.0 [MN]PN{I|L}NACMQQ{I|L}D 4.6775 - 9394 + 1 1.071 77130.3 0.8899999856948853 8271 4801 13059 HBL1_DMSO_200M_050219_2,13074 HBL1_DMSO_200M_050219_2,13074,MYFWKRFCFWK False False DGIAIQQI 69.498853 857.901599109173 0.0 13059.0 ENSG00000103657|ENST00000443617|HERC1 2.205948273340861 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13075 69.513 800.0 314890.0 25 0 42344.0 + 31151 RLPDIPLRQV 10 171 402.91506482592746 1205.7233650779824 3 402.9151489138603 MULTI CID FTMS 0 0 0 13059 125285.2890625 0.5896635922489315 -2 0.207061767578125 16 Unmodified _RLPDIPLRQV_ ENSG00000164941|ENST00000523731|INTS8;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8 31.635753872319068 0.2578985419642538 4 [R{I|L}]PD{I|L} 5 5 33.421 0.0 0.0 2.7719 0.0 0.0 0.0 608.3511055547294 608.3511055547294 14.356486094515173 0.0 0.0 0.0 0 0.5 0.6989700043360187 0.0 0.9749073637206092 + [R{I|L}]PD{I|L} 2.7719 + + 892 1 1.071 195890.0 0.6499999761581421 8272 4801 13059 HBL1_DMSO_200M_050219_2,13075 HBL1_DMSO_200M_050219_2,13075,RLPDIPLRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13076 69.528 800.0 78673.0 25 0 12258.0 -1 0 86 905.4157584599526 1808.816963986705 2 905.917529284954 MULTI CID FTMS 0 0 0 13059 109847.71875 0.2156515265950688 3 -0.308837890625 17 4 {[DA]|[EG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}TV{I|L} 8 -1 39.715 0.0 0.0 2.1956 0.0 0.0 0.0 918.3060136295364 918.3060136295364 12.956930342909024 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9247425010840048 0.0 {[DA]|[EG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}TV{I|L} 2.1956 - 1416 1 1.071 48901.5 0.8700000047683716 8273 4801 13059 HBL1_DMSO_200M_050219_2,13076 HBL1_DMSO_200M_050219_2,13076, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13077 69.542 800.0 83046.0 25 0 17528.0 -1 0 59 1112.4449815584771 3334.3131152756314 3 1112.783740222454 MULTI CID FTMS 0 0 0 13059 113179.703125 1.0 0 0.0 18 4 E 1 -1 6.9897 0.0 0.0 0.20963 0.0 0.0 2678.08515991739 524.1605318658811 3202.245691783271 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20963 - 27 + 1 1.071 60911.4 0.7400000095367432 8274 4801 13059 HBL1_DMSO_200M_050219_2,13077 HBL1_DMSO_200M_050219_2,13077, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13078 69.557 800.0 312160.0 25 0 19351.0 18079 KTIAEDLAKAQ 11 234 396.5591416542448 1186.6555955629342 3 396.5594665408134 MULTI CID FTMS 0 0 0 13059 111181.1796875 0.6117745876262157 -1 0.0976028442382812 19 Unmodified _KTIAEDLAKAQ_ ENSG00000162641|ENST00000370001|AKNAD1;ENST00000466413.1_1_1:109358795-109359852:-|nuORF;ENST00000477908.1_1_1:109358795-109359618:-|nuORF 29.291429492411588 0.4044309236191126 4 [{I|L}T]KAEE{I|L}ERV 10 7 [{I|L}T]KA + + 55.697 22.349 5.4079 4.6936 4.6936 51.291 0.0 0.0 0.0 0.0 30.13618105307549 0.0 0.0 0 1.1861818737241734 0.0 1.035666875892183 0.555462187404089 [{I|L}T]KAEE{I|L}ERV 4.6936 - 1954 + 1 1.071 191146.4 0.6499999761581421 8275 4801 13059 HBL1_DMSO_200M_050219_2,13078 HBL1_DMSO_200M_050219_2,13078,KTIAEDLAKAQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13079 69.564 418.0 504770.0 25 0 45462.0 + 37385 TLADLVHHV 9 180 335.52245106176935 1003.545523785508 3 335.5220214724541 MULTI CID FTMS 0 0 0 13059 106380.3125 0.2777600763981572 -3 0.3144989013671875 20 Unmodified _TLADLVHHV_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 36.04419817259434 0.0971720506436186 4 [{I|L}T]AD{I|L}VHHV 9 0 + 70.213 0.0 0.0 6.9965 6.9965 76.797 0.0 0.0 0.0 27.147642715192504 0.5799194697768684 0.5799194697768684 0.5799194697768684 0 0.7059771852360797 2.0 0.0 0.0 + + [{I|L}T]AD{I|L}VHHV;[{I|L}T]AD{I|L}VHVH;[{I|L}T]AVEVHHV;[{I|L}T]AVEVHVH;[{I|L}T]ADV{I|L}HHV;[{I|L}T]ADV{I|L}HVH;[{I|L}T]AVD{I|L}HHV;[{I|L}T]AVD{I|L}HVH;[{I|L}T]W{I|L}MNKV;[{I|L}T]ADV{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KV 6.9965;6.9387;6.3991;6.3413;6;5.9422;5.4026;5.3448;3.6627;3.0385 +;-;-;-;-;-;-;-;-;- + 708 + 1 1.071 169898.7 1.0 8276 4801 13059 HBL1_DMSO_200M_050219_2,13079 HBL1_DMSO_200M_050219_2,13079,TLADLVHHV True True TLADLVHHV 69.56426 335.522021472454 6768072.5 13059.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 8.580513159434 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13081 69.569 4.2 8647600.0 25 0 2415800.0 + 18845 LASPHSPIL 9 58 467.77147392708576 933.5283949209716 2 467.7718383669853 MULTI CID FTMS 0 0 0 13080 9911956.0 0.4022541592014749 2 -0.1739730834960937 1 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 36.04419817259434 0.0971720506436186 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}A[PS]{I|L}{I|L} 9 3 + 56.176 0.0 0.0 6.0176 6.0176 87.253 0.0 0.0 0.0 5.642492736872597 40.6914468044949 5.642492736872597 10.796896906561033 0 0.5 0.0 1.2302046884880935 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}A[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VTA[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L};[{I|L}A][PS]H[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[PG]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[R{M(Oxidation (M))|F}][{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[PS][TA]{I|L}{I|L};[R{M(Oxidation (M))|F}][{I|L}T][TA]{I|L}{I|L} 6.0176;4.861;3.1278;3.0901;2.4523;2.3975;2.2636;1.9712;1.8374 -;-;-;+;-;-;-;-;- + 118 1 1.081 35324.9 1.0 8277 4802 13080 HBL1_DMSO_200M_050219_2,13081 HBL1_DMSO_200M_050219_2,13081,LASPHSPIL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13082 69.57 13.0 4540400.0 25 0 636190.0 + 40583 VKPSVPLF 8 73 443.773538906193 885.532524879186 2 443.7736999392509 MULTI CID FTMS 0 0 0 13080 4181659.5 0.2440276061930402 26 -2.555381774902344 2 Unmodified _VKPSVPLF_ REV__ENSG00000165792|ENST00000339374|METTL17;REV__ENST00000555902.6_1_14:21458708-21463066:+|nuORF;REV__nc|ENSG00000165792|Q9H7H0-2|METTL17;REV__nc|ENSG00000165792|Q9H7H0-3|METTL17 20.453626601364224 0.6087503291685402 4 {I|L}P 2 -1 44.776 0.0 0.0 5.0564 0.0 0.0 0.0 672.3729882333724 672.3729882333724 18.34453751150932 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}P 5.0564 - 126 + 1 1.081 50129.2 1.0 8278 4802 13080 HBL1_DMSO_200M_050219_2,13082 HBL1_DMSO_200M_050219_2,13082,VKPSVPLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13083 69.571 12.0 3774500.0 25 0 867430.0 + 25212 MVADKFTEL 9 62 527.2676911904107 1052.5208294476213 2 527.2683593630791 MULTI CID FTMS 0 0 0 13080 3959412.75 0.0935703289569955 -3 0.3419265747070312 3 Unmodified _MVADKFTEL_ ENSG00000105568|ENST00000322088|PPP2R1A 30.63653989081413 0.1413794767160703 4 {[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}TE{I|L}{[ET]|[MV]} 9 6 + 48.121 0.0 0.0 4.572 4.572 68.151 0.0 0.0 0.0 8.494850021680087 1.1879668873561542 1.1879668873561542 1.1879668873561542 0 0.0 0.0 1.6237125054200234 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}TE{I|L}{[ET]|[MV]};{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}TEVM{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}VM{I|L}{[ET]|[MV]};{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}VMVM{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}V[YV][DP];[{M(Oxidation (M))|F}T]{I|L}EA[KC]E{I|L};[YV]VEA[KC]E{I|L};[{M(Oxidation (M))|F}T]{I|L}ET{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VS];[YV]VET{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VS];[VP][HQ]TE{I|L}{[ET]|[MV]} 4.572;4.4591;4.2442;4.1313;3.4382;2.5832;2.2972;2.2787;1.9927;1.9834 -;-;-;-;-;-;-;-;-;- 300 1 1.081 41011.0 1.0 8279 4802 13080 HBL1_DMSO_200M_050219_2,13083 HBL1_DMSO_200M_050219_2,13083,MVADKFTEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13084 69.572 19.0 3049500.0 25 0 399310.0 + 16929 KILEDVVGV 9 92 486.29252884999113 970.5705047667824 2 486.2924682497978 MULTI CID FTMS 0 0 0 13080 2570961.5 0.8786934579335441 -1 0.1348648071289062 4 Unmodified _KILEDVVGV_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 45.69961567697781 0.0497987121815769 4 EDVVGV 6 3 53.99 0.0 0.0 5.5627 0.0 0.0 354.26509291816564 0.0 354.26509291816564 0.0 33.53199407328319 0.0 0.0 0 1.0 0.0 0.7614393726401688 0.0 + EDVVGV 5.5627 + + 181 1 1.081 46825.1 1.0 8280 4802 13080 HBL1_DMSO_200M_050219_2,13084 HBL1_DMSO_200M_050219_2,13084,KILEDVVGV True True KILEDVVGV 69.57223 486.292468249798 44215440.0 13080.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 6.435140768686931 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13085 69.573 15.0 3136000.0 25 0 249300.0 + -1 VMAPRTVLL 9 83 508.3005432258792 1014.5865335185584 2 508.3023254275322 MULTI CID FTMS 0 0 0 13080 2432841.5 0.9748250945462636 -2 0.2324676513671875 5 Oxidation (M) _VM(Oxidation (M))APRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;ENST00000498007.1_1_6:31324459-31324935:-|nuORF 18.373094154950223 0.3393451798331396 4 V{M(Oxidation (M))|F}AP 4 -1 44.68 0.0 0.0 4.4038 0.0 0.0 0.0 597.3778170221311 597.3778170221311 10.440228147639203 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.0 V{M(Oxidation (M))|F}AP 4.4038 + + 67 + 1 1.081 40676.8 1.0 8281 4802 13080 HBL1_DMSO_200M_050219_2,13085 HBL1_DMSO_200M_050219_2,13085,VMAPRTVLL False False VMAPRTVLL 69.573409 508.302325427532 40962056.0 13080.0 ENSG00000234745|ENST00000412585|HLA-B;;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;;ENST00000498007.1_1_6:31324459-31324935:-|nuORF -0.431773583094279 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13086 69.575 13.0 2969900.0 25 0 220050.0 -1 TAVVYTCSL 9 75 507.2525466742936 1012.4905404153872 2 507.2527343630791 MULTI CID FTMS 0 0 0 13080 2192513.25 1.0 0 0.0 6 Carbamidomethyl (C) _TAVVYTC(Carbamidomethyl (C))SL_ ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219129258-219130549:-|nuORF;ENST00000494720.5_1_2:219129258-219130297:-|nuORF 21.74664581756881 0.2544899275067181 4 S{I|L} 2 -1 23.583 0.0 0.0 2.3293 0.0 0.0 794.3632801388231 0.0 794.3632801388231 0.0 -0.8277312442453422 -0.8277312442453422 0.0 0 0.0 0.0 0.2614393726401688 0.0 S{I|L} 2.3293 + + 46 + 1 1.081 36617.5 1.0 8282 4802 13080 HBL1_DMSO_200M_050219_2,13086 HBL1_DMSO_200M_050219_2,13086,TAVVYTCSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13087 69.576 32.0 1073300.0 25 0 138590.0 + -1 GSCEICTLIGL 11 56 611.7937263123164 1221.572899691433 2 611.7943603396416 MULTI CID FTMS 0 0 0 13080 1542421.0 1.0 0 0.0 7 2 Carbamidomethyl (C) _GSC(Carbamidomethyl (C))EIC(Carbamidomethyl (C))TLIGL_ REV__ENSG00000151693|ENST00000281419|ASAP2;REV__ENSG00000153317|ENST00000518721|ASAP1;REV__nc|ENSG00000151693|O43150-2|ASAP2;REV__nc|ENSG00000153317|Q9ULH1-2|ASAP1 8.745405648335112 0.8338865417133445 4 {I|L}{I|L}{[VA]|[{I|L}G]} 4 -1 21.198 0.0 0.0 1.7353 0.0 0.0 807.2906115501057 0.0 807.2906115501057 0.0 13.239087409443188 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{I|L}{[VA]|[{I|L}G]} 1.7353 + + 29 1 1.081 31910.1 1.0 8283 4802 13080 HBL1_DMSO_200M_050219_2,13087 HBL1_DMSO_200M_050219_2,13087,GSCEICTLIGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13088 69.577 34.0 1530100.0 25 0 284560.0 33290 SFQLKAAALP 10 75 523.3046063582137 1044.5946597832274 2 523.3038818240166 MULTI CID FTMS 0 0 0 13080 1492088.125 0.6363355230597231 3 -0.2560501098632812 8 Unmodified _SFQLKAAALP_ ENSG00000118495|ENST00000674357|PLAGL1;nc|ENSG00000118495|Q9UM63-2|PLAGL1 3.944395688203298 0.708391353636983 4 V 1 10 8.9258 0.0 0.0 0.85447 0.0 0.0 927.5151900340072 0.0 927.5151900340072 0.0 4.321686989999636 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.85447 - 11 + 1 1.081 49033.5 1.0 8284 4802 13080 HBL1_DMSO_200M_050219_2,13088 HBL1_DMSO_200M_050219_2,13088,SFQLKAAALP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13089 69.578 40.0 2115300.0 25 0 244520.0 + 21921 LPPHIIRL 8 84 320.2117583217455 957.6134455654365 3 320.2113525271416 MULTI CID FTMS 0 0 0 13080 1316887.0 0.1738233839835924 32 -3.242340087890625 9 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 22.736283301280096 0.5659792798204337 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 0 + 60.355 0.0 0.0 6.3026 6.3026 78.789 0.0 0.0 0.0 49.38547520912806 3.979400086720375 3.979400086720375 3.0102999566398125 0 0.0 1.5228787452803376 0.0 0.0 + + {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 6.3026;5.9882;5.6739;3.7693 +;-;-;- + 87 + 1 1.081 73605.0 1.0 8285 4802 13080 HBL1_DMSO_200M_050219_2,13089 HBL1_DMSO_200M_050219_2,13089,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13090 69.579 19.0 1876100.0 25 0 213040.0 + 2205 AQAPSSFQL 9 67 474.7430851483264 947.4716173634528 2 474.7432433962822 MULTI CID FTMS 0 0 0 13080 1226560.75 0.4708312600734042 -2 0.2324676513671875 10 Unmodified _AQAPSSFQL_ ENSG00000100714|ENST00000652337|MTHFD1 34.10243960390752 0.1078313939113124 4 {I|L} 1 8 14.604 0.0 0.0 1.5414 0.0 0.0 816.3766599433342 0.0 816.3766599433342 0.0 0.0269751594335314 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5414 + + 73 + 1 1.081 35836.3 1.0 8286 4802 13080 HBL1_DMSO_200M_050219_2,13090 HBL1_DMSO_200M_050219_2,13090,AQAPSSFQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13091 69.581 66.0 1075500.0 25 0 154420.0 + 22642 LPYPVKIKV 9 72 352.89885918034685 1055.6747481412406 3 352.8985168337822 MULTI CID FTMS 0 0 0 13080 681615.9375 0.5246261015202044 -2 0.2324676513671875 11 Unmodified _LPYPVKIKV_ ENSG00000074696|ENST00000261875|HACD3;nc|ENSG00000074696|Q9P035-2|HACD3 22.65808497894818 0.2428932432760099 4 {I|L}PYVPK{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 52.872 0.0 0.0 5.0084 5.0084 71.092 0.0 0.0 0.0 25.758884703078728 3.9524249272868417 3.9524249272868417 1.7609125905568137 0 0.2059771852360797 1.2218487496163564 0.0 0.0 {I|L}PYVPK{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}PYPVK{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 5.0084;4.8415 -;+ + 127 + 1 1.081 68319.3 1.0 8287 4802 13080 HBL1_DMSO_200M_050219_2,13091 HBL1_DMSO_200M_050219_2,13091,LPYPVKIKV False True LPYPVKIKV 69.580893 352.898516833782 11919877.0 13080.0 ENSG00000074696|ENST00000261875|HACD3;;nc|ENSG00000074696|Q9P035-2|HACD3 4.170220216115316 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13092 69.583 101.0 547890.0 25 0 28263.0 + 16897 KIIDETMAQL 10 75 581.3116002525371 1160.608647571874 2 581.3124877810478 MULTI CID FTMS 0 0 0 13080 665743.25 0.4965924887713108 1 -0.062652587890625 12 Unmodified _KIIDETMAQL_ ENSG00000072501|ENST00000322213|SMC1A 65.47368725323818 0.0222277162070287 4 DETMAQ{I|L} 7 3 74.188 0.0 0.0 6.3922 0.0 0.0 354.2628346173844 0.0 354.2628346173844 0.0 57.99040748309551 0.0 0.0 0 1.048455006504028 0.0 1.774227503252014 0.0 + DETMAQ{I|L} 6.3922 + + 415 1 1.081 47399.8 1.0 8288 4802 13080 HBL1_DMSO_200M_050219_2,13092 HBL1_DMSO_200M_050219_2,13092,KIIDETMAQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13093 69.585 84.0 949180.0 25 0 81488.0 + 21777 LPNAVITRI 9 104 498.8138193580857 995.6130857829714 2 498.8129760622978 MULTI CID FTMS 0 0 0 13080 659644.0 0.0132566817579647 -9 0.9333267211914062 13 Unmodified _LPNAVITRI_ ENSG00000148229|ENST00000374171|POLE3;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 53.40400417844725 0.0329064971918313 4 {I|L}PNAV{I|L}RT{I|L} 9 2 + 89.171 0.0 0.0 8.9564 8.9564 93.258 0.0 0.0 0.0 59.43463337597214 10.26109525496348 10.26109525496348 9.208187539523747 0 1.336696871556164 1.6989700043360187 0.2134679910804404 0.3807196863200844 {I|L}PNAV{I|L}RT{I|L};{I|L}PGGAV{I|L}RT{I|L};{I|L}PNA{I|L}VRT{I|L};{I|L}PGGA{I|L}VRT{I|L} 8.9564;8.0315;7.7227;6.7978 -;-;-;- 271 + 1 1.081 67044.6 1.0 8289 4802 13080 HBL1_DMSO_200M_050219_2,13093 HBL1_DMSO_200M_050219_2,13093,LPNAVITRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13094 69.587 75.0 916240.0 25 0 83875.0 + 7515 YFISYGIEH 9 94 563.2737448093477 1124.532936685495 2 564.7744018435478 MULTI CID FTMS 0 0 0 13080 532557.6875 1.0 0 0.0 14 Unmodified _EHQLDELLE_ ENSG00000134954|ENST00000392668|ETS1;nc|ENSG00000134954|P14921|ETS1;nc|ENSG00000134954|P14921-2|ETS1;nc|ENSG00000134954|P14921-5|ETS1 9.38312468134398 0.5871240394367778 4 {I|L}SYG{I|L}EH 7 7 47.555 0.0 0.0 4.2289 0.0 0.0 307.13558412258584 0.0 307.13558412258584 0.0 32.73673829057181 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 {I|L}SYG{I|L}EH 4.2289 - 384 + 1 1.081 58336.2 1.0 8290 4802 13080 HBL1_DMSO_200M_050219_2,13094 HBL1_DMSO_200M_050219_2,13094,EHQLDELLE False False YFISYGIEH 69.586686 564.774401843548 5110337.5 13080.0 ENSG00000134954|ENST00000392668|ETS1;;nc|ENSG00000134954|P14921|ETS1;;nc|ENSG00000134954|P14921-2|ETS1;;nc|ENSG00000134954|P14921-5|ETS1 6.737064997355144 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13095 69.59 171.0 624780.0 25 0 166120.0 + 31152 RLPDIPLRQV 10 66 603.869608344337 1205.724663755474 2 603.8696777224541 MULTI CID FTMS 0 0 0 13080 468954.90625 1.0 0 0.0 15 Unmodified _RLPDIPLRQV_ ENSG00000164941|ENST00000523731|INTS8;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;ENST00000523321.5_1_8:95835614-95871872:+|nuORF;nc|ENSG00000164941|Q75QN2-2|INTS8 39.92294525591503 0.1583807461695373 4 VG{I|L}[DP]{I|L} 6 7 45.239 0.0 0.0 3.752 0.0 0.0 0.0 608.3523653619749 608.3523653619749 31.743654027429287 0.0 0.0 0.0 0 1.305462187404089 0.6777807052660807 0.0 0.0 VG{I|L}[DP]{I|L} 3.752 - 72 + 1 1.081 82645.6 1.0 8291 4802 13080 HBL1_DMSO_200M_050219_2,13095 HBL1_DMSO_200M_050219_2,13095,RLPDIPLRQV False True RLPDIPLRQV 69.590032 603.869677722454 6445246.5 13080.0 ENST00000523321.5_1_8:95835614-95871872:+|nuORF;;ENST00000523206.5_1_8:95850795-95884149:+|nuORF;;ENSG00000164941|ENST00000523731|INTS8;;nc|ENSG00000164941|Q75QN2-2|INTS8 6.118930816650391 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13096 69.594 210.0 442810.0 25 0 78540.0 + -1 LPLMCLLFCS 10 80 635.3076884851222 1268.6008240370445 2 635.3083373904228 MULTI CID FTMS 0 0 0 13080 288059.1875 0.915533831986188 -1 0.1348648071289062 16 2 Carbamidomethyl (C),Oxidation (M) _LPLM(Oxidation (M))C(Carbamidomethyl (C))LLFC(Carbamidomethyl (C))S_ REV__ENST00000394607.7_1_4:111026722-111119460:-|nuORF 14.838274106304384 0.5985701837916485 4 {I|L}P{I|L} 3 -1 43.901 0.0 0.0 3.4606 0.0 0.0 0.0 942.3585817128284 942.3585817128284 10.613557530398865 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 {I|L}P{I|L} 3.4606 + + 147 + 1 1.081 74052.6 1.0 8292 4802 13080 HBL1_DMSO_200M_050219_2,13096 HBL1_DMSO_200M_050219_2,13096,LPLMCLLFCS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13097 69.597 127.0 810970.0 25 0 38330.0 + 31887 RTLPKLYSL 9 139 545.8363889789756 1089.6582250247511 2 545.8370849490166 MULTI CID FTMS 0 0 0 13080 275200.125 0.8192006769118798 -1 0.1348648071289062 17 Unmodified _RTLPKLYSL_ ENSG00000066422|ENST00000312938|ZBTB11 43.77239144664712 0.0547478964384323 4 {I|L}[TP][R{I|L}]KYS{I|L} 9 4 + 42.602 0.0 0.0 3.9097 3.9097 75.17 0.0 0.0 0.0 29.21281968974497 2.816001920549752 2.816001920549752 7.660705676841012 0 1.305462187404089 0.0 0.9916440611282626 0.0 {I|L}[TP][R{I|L}]KYS{I|L};{I|L}[TP][R{I|L}]KYTV;[{M(Oxidation (M))|F}V][WK]VV{I|L}S{I|L};{[TV]|[{I|L}S]}[RK]HH{I|L}S{I|L};[{M(Oxidation (M))|F}V]D[KA]VV{I|L}S{I|L};[{M(Oxidation (M))|F}V]Q[VS]VV{I|L}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[VS]VV{I|L}S{I|L};[KA][{I|L}T]{M(Oxidation (M))|F}VV{I|L}S{I|L} 3.9097;3.2066;2.8396;2.746;2.725;2.5634;0.66001;0.13816 -;-;-;-;-;-;-;- 472 + 1 1.081 80307.5 1.0 8293 4802 13080 HBL1_DMSO_200M_050219_2,13097 HBL1_DMSO_200M_050219_2,13097,RTLPKLYSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13098 69.61 775.0 213160.0 25 0 41482.0 -1 0 112 1114.7795421227474 3341.3167969684428 3 1114.776171863079 MULTI CID FTMS 0 0 0 13080 233268.859375 0.3634586261809868 -3 0.3419265747070312 18 4 {M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}Y[C(Carbamidomethyl (C))N]{I|L}{[CA]|SS}QVVR 13 -1 30.861 0.0 0.0 0.92363 0.0 0.0 1166.433933948471 511.2146700494749 1677.6486039979457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.5114393726401687 {M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}Y[C(Carbamidomethyl (C))N]{I|L}{[CA]|SS}QVVR 0.92363 - 1703 + 1 1.081 134038.5 1.0 8294 4802 13080 HBL1_DMSO_200M_050219_2,13098 HBL1_DMSO_200M_050219_2,13098, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13099 69.624 800.0 330350.0 25 0 15364.0 + 44922 YPPPVDPKKLI 11 180 422.91994310425326 1265.7379999129598 3 422.9199706912041 MULTI CID FTMS 0 0 0 13080 174960.453125 1.0 0 0.0 19 Unmodified _YPPPVDPKKLI_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 25.154963734998336 0.5015564154082124 4 YPP[VP]DPKK{I|L}{I|L} 11 0 + 48.269 0.0 0.0 3.8135 3.8135 72.859 0.0 0.0 0.0 21.00335226390594 4.4392039604820965 4.4392039604820965 5.740312677277188 0 0.7059771852360797 1.6989700043360187 0.0 0.0 + + YPP[VP]DPKK{I|L}{I|L};YPP[VP]DKKP{I|L}{I|L};YP{I|L}Y[QT]KK{I|L}{I|L};YP[RH][QA]{I|L}R{I|L}{I|L};Y[Y{I|L}][QT]PKK{I|L}{I|L};[KP]RR{I|L}{[QN]|[E{I|L}]|[KN]}{I|L}{[QN]|[E{I|L}]|[KN]};Y[Y{I|L}]P[QT]KK{I|L}{I|L};[KP]K[PS]{I|L}{[QN]|[E{I|L}]|[KN]}{I|L}{[QN]|[E{I|L}]|[KN]} 3.8135;3.36;3.1619;2.2393;0.7419;0.25311;0.19356;0.018729 +;-;-;-;-;-;-;- + 742 + 1 1.081 213179.5 0.8799999952316284 8295 4802 13080 HBL1_DMSO_200M_050219_2,13099 HBL1_DMSO_200M_050219_2,13099,YPPPVDPKKLI False True YPPPVDPKKLI 69.623922 422.919970691204 3773431.0 13080.0 ENST00000524933.1_1_11:13716477-13732426:+|nuORF;;ENSG00000197601|ENST00000354817|FAR1 2.877983291943868 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13100 69.627 150.0 470730.0 25 0 40656.0 + 17137 KLHEYFPEM 9 115 398.527393500204 1192.560351100812 3 398.5275451540947 MULTI CID FTMS 0 0 0 13080 175718.90625 0.3325514664779194 -2 0.2324676513671875 20 Unmodified _KLHEYFPEM_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 15.248480904072842 0.4239247793462406 4 KY{M(Oxidation (M))|F}PEM 6 3 26.815 0.0 0.0 2.2486 0.0 0.0 379.1987477033219 0.0 379.1987477033219 0.0 9.825703356767264 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.0 KY{M(Oxidation (M))|F}PEM 2.2486 - 318 1 1.081 63989.8 1.0 8296 4802 13080 HBL1_DMSO_200M_050219_2,13100 HBL1_DMSO_200M_050219_2,13100,KLHEYFPEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13102 69.631 8.5 5018800.0 25 0 384640.0 + 28853 QAIEKLEEI 9 74 536.7977009178835 1071.580848902567 2 536.7980834841728 MULTI CID FTMS 0 0 0 13101 5339961.0 0.7312136290452225 2 -0.1933975219726562 1 Unmodified _QAIEKLEEI_ ENSG00000230453|ENST00000684830|ANKRD18B;ENST00000354752.5_1_9:99922575-99942308:-|nuORF;nc|ENSG00000230453|A2A2Z9|ANKRD18B 29.84058131909904 0.1515068451768857 4 [QA]{I|L}{M(Oxidation (M))|F}{I|L}KE 7 4 45.508 0.0 0.0 4.2468 0.0 0.0 0.0 239.10427271060783 239.10427271060783 26.91409149241124 0.0 0.0 0.0 0 1.0 0.0 1.1307196863200843 0.0 [QA]{I|L}{M(Oxidation (M))|F}{I|L}KE 4.2468 - 369 + 1 1.081 38236.2 1.0 8297 4803 13101 HBL1_DMSO_200M_050219_2,13102 HBL1_DMSO_200M_050219_2,13102,QAIEKLEEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13103 69.633 10.0 5035100.0 25 0 504850.0 + 26186 NQFPGFKEV 9 78 533.2719200115437 1064.5292870898872 2 533.2722045779228 MULTI CID FTMS 0 0 0 13101 4285320.5 0.1719833230793187 5 -0.5230789184570312 2 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 36.506200033944 0.094635877243972 4 {[ET]|[MV]}AK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 9 9 + 43.451 0.0 0.0 4.0817 4.0817 73.844 0.0 0.0 0.0 0.1579426718323162 31.795606106491903 0.1579426718323162 5.82650597641134 0 1.0 0.0 1.110924374808178 0.0 {[ET]|[MV]}AK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}K[WP];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[PG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}PG[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P[R{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[DA]|[EG]}[{I|L}T]{M(Oxidation (M))|F}[HS] 4.0817;3.5344;3.1423;2.0976;2.0546;1.4673 -;-;-;-;-;- 182 1 1.081 46270.5 1.0 8298 4803 13101 HBL1_DMSO_200M_050219_2,13103 HBL1_DMSO_200M_050219_2,13103,NQFPGFKEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13104 69.634 30.0 3191600.0 25 0 805080.0 -1 0 31 1107.113263601947 3318.317961406041 3 1107.448779284954 MULTI CID FTMS 0 0 0 13101 5108745.0 1.0 0 0.0 3 4 E 1 -1 6.9897 0.0 0.0 0.21064 0.0 0.0 2662.088573632372 524.1627291315061 3186.251302763878 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21064 - 4 + 1 1.081 93341.5 1.0 8299 4803 13101 HBL1_DMSO_200M_050219_2,13104 HBL1_DMSO_200M_050219_2,13104, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13105 69.635 18.0 1858600.0 25 0 219790.0 + 36195 SVVSPSSFENV 11 76 576.2819164997713 1150.5492800663426 2 576.2828246951103 MULTI CID FTMS 0 0 0 13101 2694059.5 0.7009624165340737 -1 0.062652587890625 4 Unmodified _SVVSPSSFENV_ ENSG00000070831|ENST00000656825|CDC42;nc|ENSG00000289694|P60953-1|CDC42 38.17557092003332 0.2405003631267018 4 [VS]VS{[C(Carbamidomethyl (C))E]|[WC]}VS{[RE]|[WV]} 10 6 + 46.469 0.0 0.0 4.0388 4.0388 76.43 0.0 0.0 0.0 14.611603660887898 6.478174818886373 6.478174818886373 8.873409493950675 0 0.5 2.0 0.1803115997617927 0.0 [VS]VS{[C(Carbamidomethyl (C))E]|[WC]}VS{[RE]|[WV]};[VS]WD{M(Oxidation (M))|F}VN{[RE]|[WV]};[DV][W{M(Oxidation (M))|F}]NVS{[RE]|[WV]};[DV]G{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}VN{[RE]|[WV]};[DV][W{M(Oxidation (M))|F}]SVN{[RE]|[WV]};[VS]WD{M(Oxidation (M))|F}VGG{[RE]|[WV]};[DV]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}VN{[RE]|[WV]};[DV][W{M(Oxidation (M))|F}]D[KG]{[RE]|[WV]};[R{M(Oxidation (M))|F}]SV{[C(Carbamidomethyl (C))E]|[WC]}S[PA]V;[DV]G{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}VGG{[RE]|[WV]} 4.0388;3.2676;2.7689;2.6182;2.6158;2.4673;2.3542;2.27;1.8822;1.8216 -;-;-;-;-;-;-;-;-;- 242 1 1.081 32121.1 1.0 8300 4803 13101 HBL1_DMSO_200M_050219_2,13105 HBL1_DMSO_200M_050219_2,13105,SVVSPSSFENV False True SVVSPSSFENV 69.634913 576.28282469511 124221192.0 13101.0 nc|ENSG00000289694|P60953-1|CDC42;;ENSG00000070831|ENST00000656825|CDC42 6.751442591349284 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13106 69.636 24.0 1209600.0 25 0 169710.0 -1 NMEPYCCRETL 11 57 736.800386494403 1471.586220055606 2 736.8015014529228 MULTI CID FTMS 0 0 0 13101 2210352.75 1.0 0 0.0 5 2 Carbamidomethyl (C) _NMEPYC(Carbamidomethyl (C))C(Carbamidomethyl (C))RETL_ ENSG00000136014|ENST00000258499|USP44 3.2813086475875832 0.8596665074481906 4 AT{I|L} 3 -1 31.031 0.0 0.0 2.1087 0.0 0.0 1168.4066068737684 0.0 1168.4066068737684 0.0 18.890756251918216 0.0 0.0 0 0.4247425010840047 0.0 0.7742275032520141 0.0 AT{I|L} 2.1087 - 24 + 1 1.081 28489.9 1.0 8301 4803 13101 HBL1_DMSO_200M_050219_2,13106 HBL1_DMSO_200M_050219_2,13106,NMEPYCCRETL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13107 69.637 23.0 2724600.0 25 0 348610.0 + 4916 DGLAPPQHLI 10 87 530.7918401942215 1059.569127455243 2 530.7932006716728 MULTI CID FTMS 0 0 0 13101 1726044.25 0.5675616109984438 -1 0.062652587890625 6 Unmodified _DGLAPPQHLI_ ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;nc|ENSG00000141510|P04637-7|TP53;nc|ENSG00000141510|P04637-8|TP53;nc|ENSG00000141510|P04637-9|TP53 29.081581746732265 0.3152867722954398 4 [VS]A{[DS]|[MA]|[CV]|TT}{I|L}A 7 8 27.476 0.0 0.0 2.5931 0.0 0.0 0.0 413.2011214340118 413.2011214340118 2.067145363723032 0.0 0.0 0.0 0 0.0 2.0 0.4456290139465234 0.0 [VS]A{[DS]|[MA]|[CV]|TT}{I|L}A 2.5931 - 424 1 1.081 53459.0 1.0 8302 4803 13101 HBL1_DMSO_200M_050219_2,13107 HBL1_DMSO_200M_050219_2,13107,DGLAPPQHLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13108 69.638 43.0 1075600.0 25 0 116670.0 + 36628 TASDKILIV 9 73 480.2915927669576 958.5686326007152 2 480.2923156619072 MULTI CID FTMS 0 0 0 13101 727625.75 0.7686183271246 1 -0.1113204956054687 7 Unmodified _TASDKILIV_ ENSG00000118965|ENST00000281405|WDR35;ENST00000445063.5_1_2:20113365-20153734:-|nuORF;nc|ENSG00000118965|Q9P2L0|WDR35 30.63653989081413 0.1413794767160703 4 [{I|L}P][YE]{I|L}{I|L}{I|L}V 8 5 + 34.587 0.0 0.0 3.6082 3.6082 81.136 0.0 0.0 0.0 13.61818737241734 5.924778212679485 5.924778212679485 34.5872875024979 0 0.6435078169319297 1.5228787452803376 0.7059771852360797 0.0 [{I|L}P][YE]{I|L}{I|L}{I|L}V 3.6082 - 60 1 1.081 42200.1 1.0 8303 4803 13101 HBL1_DMSO_200M_050219_2,13108 HBL1_DMSO_200M_050219_2,13108,TASDKILIV False True TASDKILIV 69.638492 480.292315661907 10624442.0 13101.0 ENST00000445063.5_1_2:20113365-20153734:-|nuORF;;ENSG00000118965|ENST00000281405|WDR35;;nc|ENSG00000118965|Q9P2L0|WDR35 3.610129594802856 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13109 69.64 75.0 912960.0 25 0 91365.0 + 38266 TPWQPPTV 8 89 463.2431287016038 924.4717044700076 2 463.2429382205009 MULTI CID FTMS 0 0 0 13101 689740.9375 0.9747390357199384 -1 0.062652587890625 8 Unmodified _TPWQPPTV_ ENSG00000143476|ENST00000366991|DTL 74.42276476219924 0.1056688965812189 4 [TP]WQPPVT 8 2 + 57.457 0.0 0.0 6.2152 6.2152 82.986 0.0 0.0 0.0 6.294161579347637 15.37524078472338 6.294161579347637 6.294161579347637 0 0.8737125054200235 2.0 0.5866968715561641 0.0 [TP]WQPPVT;[WP]QTPPVT;[TP]W[AG]PPVT;[TP]P[WQ]PVT;[WP]TQPPVT;[WP][AG]TPPVT;[WP]T[AG]PPVT;[WQ]PTPPVT;[AG]WPTPPVT;[AG]QQQPPVT 6.2152;5.5343;5.2133;4.8335;4.8277;4.5324;3.8259;3.769;3.0865;1.3577 -;-;-;-;-;-;-;-;-;- 334 1 1.081 59308.2 1.0 8304 4803 13101 HBL1_DMSO_200M_050219_2,13109 HBL1_DMSO_200M_050219_2,13109,TPWQPPTV True True TPWQPPTV 69.640217 463.242938220501 7756832.0 13101.0 ENSG00000143476|ENST00000366991|DTL 7.022395451863607 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13110 69.643 142.0 544000.0 25 0 142720.0 + -1 TVFTDHMLTV 10 94 590.2890217415567 1178.5634905499132 2 590.2894775271416 MULTI CID FTMS 0 0 0 13101 539170.75 1.0 0 0.0 9 Oxidation (M) _TVFTDHM(Oxidation (M))LTV_ nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-5|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;ENSG00000060982|ENST00000261192|BCAT1 32.78568957990786 0.2337485590374503 4 {[TV]|[{I|L}S]}DDE[KT]{I|L}C(Carbamidomethyl (C))V 10 -1 + 38.178 0.0 0.0 3.2394 3.2394 67.456 0.0 0.0 0.0 21.52249673628745 4.800821617046935 4.800821617046935 3.0102999566398125 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}DDE[KT]{I|L}C(Carbamidomethyl (C))V;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}[QP]{I|L}C(Carbamidomethyl (C))V;{[MS]|[{M(Oxidation (M))|F}A]}VT{I|L}{M(Oxidation (M))|F}[HD]MV;{[TV]|[{I|L}S]}[QA]C(Carbamidomethyl (C))[KT]{I|L}C(Carbamidomethyl (C))V;[{M(Oxidation (M))|F}T][HD]{M(Oxidation (M))|F}{I|L}TVTV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HS]MV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HC]T{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EEPV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}S{I|L}{M(Oxidation (M))|F}[HD]MV;{[MS]|[{M(Oxidation (M))|F}A]}VT{M(Oxidation (M))|F}[HD]{M(Oxidation (M))|F}PV 3.2394;2.9839;2.9724;2.9017;2.466;2.3729;2.3128;2.1743;2.019;1.7192 -;-;-;-;-;-;-;-;-;- 645 + 1 1.081 64874.2 1.0 8305 4803 13101 HBL1_DMSO_200M_050219_2,13110 HBL1_DMSO_200M_050219_2,13110,TVFTDHMLTV False False TVFTDHMLTV 69.643086 590.289477527142 15226033.0 13101.0 nc|ENSG00000060982|P54687-2|BCAT1;;nc|ENSG00000060982|P54687-4|BCAT1;;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;;nc|ENSG00000060982|P54687-5|BCAT1;;nc|ENSG00000060982|P54687-3|BCAT1;;ENSG00000060982|ENST00000261192|BCAT1 7.199804306030273 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13111 69.651 432.0 418620.0 25 0 64214.0 + 2246 AQFEPDSTEYI 11 144 650.2910301851814 1298.5675074371627 2 650.2911254763603 MULTI CID FTMS 0 0 0 13101 513094.03125 0.8387030253261715 -1 0.062652587890625 10 Unmodified _AQFEPDSTEYI_ ENSG00000175110|ENST00000680020|MRPS22;ENST00000483545.1_1_3:139065838-139069914:+|nuORF;ENST00000498505.5_1_3:139068252-139075853:+|nuORF 65.47368725323818 0.0469305343733202 4 [DP]STEAQ{M(Oxidation (M))|F}EY{I|L} 11 8 + 67.334 0.0 0.0 5.1853 5.1853 77.494 0.0 0.0 0.0 7.574787733547573 10.550088832413543 7.574787733547573 5.083559388717376 0 0.8182503180159344 0.8239087409443188 2.278659694992122 0.0 [DP]STEAQ{M(Oxidation (M))|F}EY{I|L};[DP]STEAQE{M(Oxidation (M))|F}Y{I|L};[QA]{M(Oxidation (M))|F}E[DP]STEY{I|L};[DP]STEA[AG]{M(Oxidation (M))|F}EY{I|L};[DP]STTWSTEY{I|L};[DP]STEA[AG]E{M(Oxidation (M))|F}Y{I|L};[PS]DTEAQ{M(Oxidation (M))|F}EY{I|L};[DP]STE{M(Oxidation (M))|F}[QA]EY{I|L};[QA]{M(Oxidation (M))|F}T[HC]STEY{I|L};[DP][WM]AQ{M(Oxidation (M))|F}EY{I|L} 5.1853;4.7938;4.6019;4.4823;4.1425;4.0908;4.0125;3.8396;3.7786;3.6633 -;-;+;-;-;-;-;-;-;- + 4959 1 1.081 139502.8 1.0 8306 4803 13101 HBL1_DMSO_200M_050219_2,13111 HBL1_DMSO_200M_050219_2,13111,AQFEPDSTEYI True True AQFEPDSTEYI 69.650784 650.29112547636 5602862.0 13101.0 ENST00000498505.5_1_3:139068252-139075853:+|nuORF;;ENST00000483545.1_1_3:139065838-139069914:+|nuORF;;ENSG00000175110|ENST00000680020|MRPS22 6.648088614145915 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13112 69.652 62.0 645560.0 25 0 37915.0 38661 TTKGISARGP 10 96 494.2824682458808 986.5503835585616 2 494.2816955447197 MULTI CID FTMS 0 0 0 13101 424424.5 0.7763924644064428 -2 0.1975173950195312 11 Unmodified _TTKGISARGP_ ENSG00000270765|ENST00000604641|GAS2L2 7.289230182591677 0.6929195370588109 4 [PS]AH 4 8 18.497 0.0 0.0 1.875 0.0 0.0 0.0 591.3468062482677 591.3468062482677 0.7505849561216991 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.0 [PS]AH 1.875 - 80 1 1.081 35632.7 1.0 8307 4803 13101 HBL1_DMSO_200M_050219_2,13112 HBL1_DMSO_200M_050219_2,13112,TTKGISARGP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13113 69.654 84.0 451810.0 25 0 25395.0 26971 PEEPARAVPAP 11 85 567.3009474835255 1132.587342033851 2 568.3028442263603 MULTI CID FTMS 0 0 0 13101 265641.9375 0.5574783543317667 -2 0.1975173950195312 12 Unmodified _PEEPARAVPAP_ ENSG00000188158|ENST00000676302|NHS;nc|ENSG00000188158|Q6T4R5-2|NHS 8.745405648335112 0.8338865417133445 4 [EP]E 3 8 23.301 0.0 0.0 2.0573 0.0 0.0 0.0 774.4265503680884 774.4265503680884 3.748162098248997 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [EP]E 2.0573 + + 76 1 1.081 34498.4 1.0 8308 4803 13101 HBL1_DMSO_200M_050219_2,13113 HBL1_DMSO_200M_050219_2,13113,PEEPARAVPAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13114 69.66 304.0 384770.0 25 0 31302.0 + 37573 TLIREVTSGKI 11 126 406.24628865511687 0 406.2444946169853 PEAK CID FTMS 0 0 0 13101 272186.96875 0.7901118622782444 1 -0.1113204956054687 13 Unmodified _TLIREVTSGKI_ REV__ENST00000506377.5_1_5:180274895-180275063:-|nuORF 16.274544907608252 0.3923178659061499 4 T 1 -1 8.2613 0.0 0.0 1.0193 0.0 0.0 624.3406780408994 82.06700311832265 706.4076811592221 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1271595765414318 0.0 T 1.0193 + + 76 + 1 1.081 96529.4 1.0 8309 4803 13101 HBL1_DMSO_200M_050219_2,13114 HBL1_DMSO_200M_050219_2,13114,TLIREVTSGKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13115 69.666 357.0 401230.0 25 0 109410.0 37454 TLDVSRQV 8 137 459.25512172105454 916.4956905089092 2 459.2561523318291 MULTI CID FTMS 0 0 0 13101 169494.328125 0.6497091573784436 2 -0.1933975219726562 14 Unmodified _TLDVSRQV_ nc|ENSG00000124205|P14138-2|EDN3 13.50788311687929 0.7113601687236069 4 {I|L}KQQV 5 5 21.454 0.0 0.0 2.3408 0.0 0.0 302.12025345407227 0.0 302.12025345407227 0.0 2.0436503622272504 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 {I|L}KQQV 2.3408 - 198 + 1 1.081 114203.1 1.0 8310 4803 13101 HBL1_DMSO_200M_050219_2,13115 HBL1_DMSO_200M_050219_2,13115,TLDVSRQV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13116 69.68 800.0 111390.0 25 0 27075.0 -1 0 65 1120.1100886756965 3357.3084366272888 3 1120.781054675579 MULTI CID FTMS 0 0 0 13101 167568.578125 0.5754924349423068 -1 0.062652587890625 15 4 E 1 -1 6.9897 0.0 0.0 0.20819 0.0 0.0 2701.079796228504 524.1632788104704 3225.243075038973 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20819 - 7 + 1 1.081 80889.3 0.8399999737739563 8311 4803 13101 HBL1_DMSO_200M_050219_2,13116 HBL1_DMSO_200M_050219_2,13116, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13117 69.694 800.0 226280.0 25 0 19518.0 -1 RCHRRRRRCCC 11 140 866.9066694051579 1731.7987858771155 2 867.9026977419853 MULTI CID FTMS 0 0 0 13101 160055.03125 0.0222024300319452 31 -3.1796875 16 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 4 [NP]{I|L}TT[HA]ENAD{I|L}DV 14 -1 67.482 0.0 0.0 3.8966 0.0 0.0 0.0 238.08196393791573 238.08196393791573 42.40231736095353 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.079689690656103 0.0 [NP]{I|L}TT[HA]ENAD{I|L}DV 3.8966 - 43794 1 1.081 122264.3 1.0 8312 4803 13101 HBL1_DMSO_200M_050219_2,13117 HBL1_DMSO_200M_050219_2,13117,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13118 69.708 800.0 117610.0 25 0 7940.9 -1 0 128 922.9050505516268 1843.7955481700533 2 922.9048950076104 MULTI CID FTMS 0 0 0 13101 151072.15625 1.0 0 0.0 17 4 {[DA]|[EG]}KY{I|L}AEN 8 -1 63.075 0.0 0.0 3.4209 0.0 0.0 0.0 936.3448395121032 936.3448395121032 28.17829173327264 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.9876954943324543 0.0 {[DA]|[EG]}KY{I|L}AEN 3.4209 - 12730 1 1.081 64274.0 0.9900000095367432 8313 4803 13101 HBL1_DMSO_200M_050219_2,13118 HBL1_DMSO_200M_050219_2,13118, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13119 69.711 59.0 665380.0 25 0 105610.0 + -1 LNMQKMESV 9 69 548.2620410948396 1094.509529256479 2 548.2628661990166 MULTI CID FTMS 0 0 0 13101 139981.703125 0.0584558347592505 -2 0.1975173950195312 18 Oxidation (M) _LNM(Oxidation (M))QKMESV_ REV__nc|ENSG00000111224|Q9NR21-2|PARP11 12.531546534597751 0.4974689918368763 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 -1 25.686 0.0 0.0 2.3468 0.0 0.0 0.0 751.2752512625915 751.2752512625915 6.490437130769138 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 2.3468 - 57 1 1.081 38851.0 1.0 8314 4803 13101 HBL1_DMSO_200M_050219_2,13119 HBL1_DMSO_200M_050219_2,13119,LNMQKMESV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13120 69.725 800.0 225820.0 25 0 45008.0 -1 0 93 1096.781316668537 3287.3221206058124 3 1097.117480456829 MULTI CID FTMS 0 0 0 13101 134717.703125 0.2292367627369901 -2 0.1975173950195312 19 4 THVSVTTR 8 -1 44.688 0.0 0.0 1.3594 0.0 0.0 1944.671438088037 458.2063997858032 2402.8778378738407 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9876954943324544 1.916386562212267 THVSVTTR 1.3594 - 1408 + 1 1.081 149716.8 0.75 8315 4803 13101 HBL1_DMSO_200M_050219_2,13120 HBL1_DMSO_200M_050219_2,13120, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13121 69.738 800.0 181460.0 25 0 19764.0 5842 DPTDTWEIIET 11 167 660.3046773073543 1318.5948016815084 2 660.3049804568291 MULTI CID FTMS 0 0 0 13101 121751.796875 0.7220043516057411 -1 0.062652587890625 20 Unmodified _DPTDTWEIIET_ ENSG00000071909|ENST00000408978|MYO3B;ENST00000409940.6_1_2:171034716-171376051:+|nuORF;ENST00000438642.6_1_2:171034716-171400468:+|nuORF;nc|ENSG00000071909|Q8WXR4-2|MYO3B;nc|ENSG00000071909|Q8WXR4-3|MYO3B;nc|ENSG00000071909|Q8WXR4-4|MYO3B;nc|ENSG00000071909|Q8WXR4-5|MYO3B;nc|ENSG00000071909|Q8WXR4-6|MYO3B;nc|ENSG00000071909|Q8WXR4-7|MYO3B 21.53697664764585 0.586507868110548 4 VV{M(Oxidation (M))|F}T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D 8 9 59.033 0.0 0.0 4.4769 0.0 0.0 0.0 347.0860689752563 347.0860689752563 29.556035840209155 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.045114016114533 0.0 VV{M(Oxidation (M))|F}T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D 4.4769 - 1525 + 1 1.081 110057.1 0.8899999856948853 8316 4803 13101 HBL1_DMSO_200M_050219_2,13121 HBL1_DMSO_200M_050219_2,13121,DPTDTWEIIET False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13123 69.743 27.0 1513100.0 25 0 237840.0 + -1 GYSCYVCGL 9 79 539.7198729587901 1077.42519298438 2 539.7203857302666 MULTI CID FTMS 0 0 0 13122 1554314.125 0.7299949194825457 1 -0.0820770263671875 1 2 Carbamidomethyl (C) _GYSC(Carbamidomethyl (C))YVC(Carbamidomethyl (C))GL_ REV__ENSG00000171307|ENST00000393760|ZDHHC16;REV__ENST00000459777.5_1_10:99206080-99216645:+|nuORF;REV__ENST00000466895.5_1_10:99206080-99216645:+|nuORF;REV__ENST00000487315.1_1_10:99213348-99216645:+|nuORF;REV__ENST00000495735.5_1_10:99212613-99216645:+|nuORF;REV__nc|ENSG00000171307|Q969W1-2|ZDHHC16;REV__nc|ENSG00000171307|Q969W1-4|ZDHHC16 7.910154910731844 0.6385446671287552 4 {I|L} 1 -1 11.783 0.0 0.0 1.0936 0.0 0.0 946.3300829763708 0.0 946.3300829763708 0.0 2.19594550835472 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0936 + + 49 + 1 1.08 39237.8 1.0 8317 4804 13122 HBL1_DMSO_200M_050219_2,13123 HBL1_DMSO_200M_050219_2,13123,GYSCYVCGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13124 69.744 34.0 984290.0 25 0 110640.0 + 42291 VSSFGMDFVSL 11 55 594.781294404275 1187.5480358753498 2 594.7814819216728 MULTI CID FTMS 0 0 0 13122 1424927.0 0.7357052567284661 1 -0.0820770263671875 2 Unmodified _VSSFGMDFVSL_ REV__ENSG00000197309|ENST00000641351|OR10D3 8.745405648335112 0.8338865417133445 4 [DN]SV[DP][WR]S{I|L} 10 -1 [DN] + + 35.648 -0.65167 -0.28448 3.0018 3.0018 45.915 0.0 0.0 0.0 0.0 24.22167511924052 0.0 0.0 0 0.0 0.0 1.174742501084005 0.0 [DN]SV[DP][WR]S{I|L} 3.0018 - 74 + 1 1.08 33910.8 1.0 8318 4804 13122 HBL1_DMSO_200M_050219_2,13124 HBL1_DMSO_200M_050219_2,13124,VSSFGMDFVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13125 69.745 12.0 4630300.0 25 0 530730.0 + 3702 DAFLEAAKKI 10 91 553.3158952931525 1104.617237653105 2 553.3162109255791 MULTI CID FTMS 0 0 0 13122 3639482.5 0.5706807904111995 -1 0.1113204956054687 3 Unmodified _DAFLEAAKKI_ ENSG00000119396|ENST00000373840|RAB14 55.23464941255904 0.0494277333541689 4 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}EAAKK{I|L} 10 0 + 91.38 0.0 0.0 8.2726 8.2726 96.634 0.0 0.0 0.0 48.42400524070904 11.760912590556812 11.760912590556812 27.034021960761265 0 2.1549471895720984 1.3979400086720375 0.4247425010840047 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}EAAKK{I|L};W{M(Oxidation (M))|F}{I|L}[RD]KK{I|L};[KA]AKE{I|L}{M(Oxidation (M))|F}{[DA]|[EG]}{I|L};KK[RD]{I|L}{M(Oxidation (M))|F}W{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[RK]{I|L}{M(Oxidation (M))|F}W{I|L};KKAAE{I|L}{M(Oxidation (M))|F}{[DA]|[EG]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RD]KKW{I|L} 8.2726;5.8252;2.3241;2.1486;1.8044;1.6289;0.22247 +;-;-;-;-;-;- + 284 + 1 1.08 47563.1 1.0 8319 4804 13122 HBL1_DMSO_200M_050219_2,13125 HBL1_DMSO_200M_050219_2,13125,DAFLEAAKKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13126 69.746 19.0 2111400.0 25 0 151460.0 + 17135 KLHEYFPEM 9 74 597.2868536227504 1192.5591543123007 2 597.2872802615166 MULTI CID FTMS 0 0 0 13122 2496428.25 1.0 0 0.0 4 Unmodified _KLHEYFPEM_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 36.506200033944 0.094635877243972 4 {[YC]|[HE]}Y{M(Oxidation (M))|F}[K{I|L}]PEM 9 4 + 48.86 0.0 0.0 4.0971 4.0971 48.993 0.0 0.0 0.0 2.471799572732465 23.17410004652736 2.471799572732465 0.0 0 0.5 0.0 0.3252574989159953 0.3494850021680094 {[YC]|[HE]}Y{M(Oxidation (M))|F}[K{I|L}]PEM;{[YC]|[HE]}Y[K{I|L}]{M(Oxidation (M))|F}PEM;{[YC]|[HE]}[K{I|L}]Y{M(Oxidation (M))|F}PEM;[TP]{[QC]|[C(Carbamidomethyl (C))A]}[K{I|L}]{M(Oxidation (M))|F}PEM;[TP]{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}[K{I|L}]PEM;{[YC]|[HE]}Y[K{I|L}]P{M(Oxidation (M))|F}EM;{[YC]|[HE]}[K{I|L}]YP{M(Oxidation (M))|F}EM;[TP]{[QC]|[C(Carbamidomethyl (C))A]}[K{I|L}]P{M(Oxidation (M))|F}EM;{[YC]|[HE]}Y[K{I|L}]E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M;{[YC]|[HE]}[K{I|L}]YE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M 4.0971;4.0971;3.8447;3.325;3.325;2.8596;2.6072;2.0875;1.2061;0.95364 -;-;-;-;-;-;-;-;-;- 130 1 1.08 35209.2 1.0 8320 4804 13122 HBL1_DMSO_200M_050219_2,13126 HBL1_DMSO_200M_050219_2,13126,KLHEYFPEM True True KLHEYFPEM 69.746229 597.287280261517 65829570.0 13122.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 9.536395708719889 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13127 69.747 14.0 3497400.0 25 0 486870.0 + 25628 NFPEKISSL 9 70 517.7787940831879 1033.5430352331755 2 517.7797729372978 MULTI CID FTMS 0 0 0 13122 2253045.75 0.922591516363843 -1 0.1113204956054687 5 Unmodified _NFPEKISSL_ ENST00000420672.1_1_2:179278757-179278808:+|nuORF 17.11289562659939 0.3734572693229295 4 [EP]K{I|L}SS 6 3 35.851 0.0 0.0 3.4688 0.0 0.0 0.0 389.1825365361632 389.1825365361632 8.922815857436532 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.4247425010840047 0.0 + [EP]K{I|L}SS 3.4688 + + 74 1 1.08 44083.4 1.0 8321 4804 13122 HBL1_DMSO_200M_050219_2,13127 HBL1_DMSO_200M_050219_2,13127,NFPEKISSL False True NFPEKISSL 69.747408 517.779772937298 129427568.0 13122.0 ENST00000420672.1_1_2:179278757-179278808:+|nuORF 6.835453987121582 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13128 69.749 42.0 553650.0 25 0 50203.0 20406 LLHCEEFIDEF 11 46 697.8176721996774 1393.6207914661547 2 697.8190795779228 MULTI CID FTMS 0 0 0 13122 1039347.6875 0.95563007329065 1 -0.0820770263671875 6 Unmodified _LLHCEEFIDEF_ ENSG00000166446|ENST00000570137|CDYL2 3.2813086475875832 0.8596665074481906 4 {I|L} 1 10 6.9897 0.0 0.0 0.50155 0.0 0.0 301.1995491279625 976.3128834571124 1277.512432585075 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.50155 + + 13 + 1 1.08 26607.0 1.0 8322 4804 13122 HBL1_DMSO_200M_050219_2,13128 HBL1_DMSO_200M_050219_2,13128,LLHCEEFIDEF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13129 69.75 15.0 3785600.0 25 0 892230.0 + 12127 GQISEVVVV 9 80 465.2710064189847 0 465.2698242068291 PEAK CID FTMS 0 0 0 13122 1165675.25 1.0 0 0.0 7 Unmodified _GQISEVVVV_ ENSG00000099622|ENST00000587896|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;nc|ENSG00000099622|Q14011|CIRBP 21.74664581756881 0.185237546287679 4 M{M(Oxidation (M))|F} 2 9 7.0783 0.0 0.0 0.76232 0.0 0.0 333.23145267996307 314.1975191705688 647.4289718505319 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{M(Oxidation (M))|F} 0.76232 - 24 + 1 1.08 47793.2 1.0 8323 4804 13122 HBL1_DMSO_200M_050219_2,13129 HBL1_DMSO_200M_050219_2,13129,GQISEVVVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13130 69.751 49.0 924530.0 25 0 81227.0 + 16078 ITPRPQFP 8 90 478.2694794348787 954.5244059365574 2 478.2691223025322 MULTI CID FTMS 0 0 0 13122 885416.1875 1.0 0 0.0 8 Unmodified _ITPRPQFP_ REV__ENST00000450765.5_1_2:219523811-219524298:-|nuORF 8.593279151180031 0.7721714526254883 4 V 1 -1 11.109 0.0 0.0 1.1639 0.0 0.0 837.4452032161457 0.0 837.4452032161457 0.0 1.2763625255165325 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1639 - 52 + 1 1.08 42577.4 1.0 8324 4804 13122 HBL1_DMSO_200M_050219_2,13130 HBL1_DMSO_200M_050219_2,13130,ITPRPQFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13131 69.753 57.0 688680.0 25 0 36182.0 + 43562 WYQRVYQSL 9 80 621.816357804735 1241.61816267627 2 621.8173095583916 MULTI CID FTMS 0 0 0 13122 814327.1875 0.6191072073441924 2 -0.230499267578125 9 Unmodified _WYQRVYQSL_ ENSG00000126267|ENST00000649813|COX6B1 75.76082778847304 0.0188720312721366 4 WYQ 3 6 54.253 0.0 0.0 4.3695 0.0 0.0 0.0 761.3992403619749 761.3992403619749 8.440359212109456 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.6307196863200843 + WYQ 4.3695 + + 226 + 1 1.08 37155.8 1.0 8325 4804 13122 HBL1_DMSO_200M_050219_2,13131 HBL1_DMSO_200M_050219_2,13131,WYQRVYQSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13132 69.754 50.0 923180.0 25 0 108120.0 + 31355 RNFLETML 8 78 512.265940803884 1022.517328674568 2 513.2709228396416 MULTI CID FTMS 0 0 0 13122 647112.1875 1.0 0 0.0 10 Unmodified _RNFLETML_ REV__ENSG00000185875|ENST00000376356|THNSL1 13.50788311687929 0.7113601687236069 4 [KS]A{I|L}M{M(Oxidation (M))|F}{I|L}[DV] 9 -1 + 33.567 0.0 0.0 3.2827 3.2827 76.714 0.0 0.0 0.0 1.7854372143223465 19.587287502497908 1.7854372143223465 9.719712763997569 0 0.0 0.0 0.8494850021680094 0.0 [KS]A{I|L}M{M(Oxidation (M))|F}{I|L}[DV];{[TV]|[{I|L}S]}[KA]M{M(Oxidation (M))|F}{I|L}[DV];[MT]{I|L}[QP][YG]T{I|L};[KS]A{I|L}[YQ]A{[QD]|[EN]|[WG]|[KD]|[RS]} 3.2827;2.3322;0.93882;0.56698 -;-;-;- 128 1 1.08 39308.7 1.0 8326 4804 13122 HBL1_DMSO_200M_050219_2,13132 HBL1_DMSO_200M_050219_2,13132,RNFLETML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13133 69.755 51.0 749760.0 25 0 198840.0 + -1 YNIPGDSQTSV 11 62 590.7539615767718 1179.4933702203434 2 590.7549926638603 MULTI CID FTMS 0 0 0 13122 488994.6875 0.5154786261818286 -1 0.1113204956054687 11 Carbamidomethyl (C) _ISC(Carbamidomethyl (C))SNHYNSV_ nc|ENSG00000079308|Q9HBL0-2|TNS1;nc|ENSG00000079308|Q9HBL0-1|TNS1;ENSG00000079308|ENST00000682258|TNS1 10.823927491677226 0.6659270209832991 4 Y{I|L}C(Carbamidomethyl (C))V 4 -1 15.918 0.0 0.0 1.3495 0.0 0.0 626.2381344799122 0.0 626.2381344799122 0.0 10.43305028184122 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}C(Carbamidomethyl (C))V 1.3495 - 30 + 1 1.08 35567.9 1.0 8327 4804 13122 HBL1_DMSO_200M_050219_2,13133 HBL1_DMSO_200M_050219_2,13133,ISCSNHYNSV False False YNIPGDSQTSV 69.755204 590.75499266386 91935.8046875 13122.0 nc|ENSG00000079308|Q9HBL0-2|TNS1;;nc|ENSG00000079308|Q9HBL0-1|TNS1;;ENSG00000079308|ENST00000682258|TNS1 1.0489415725072224 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13134 69.757 49.0 935530.0 25 0 78682.0 + 20090 LIYKWGLI 8 98 503.3095237632807 1004.6044945933612 2 503.3109008669853 MULTI CID FTMS 0 0 0 13122 462670.5 0.8057250703661215 1 -0.0820770263671875 12 Unmodified _LIYKWGLI_ REV__ENST00000428210.5_1_2:61719906-61720176:-|nuORF 15.768221252438446 0.6779680726941459 4 {I|L}{I|L}Q 3 -1 17.235 0.0 0.0 1.7156 0.0 0.0 0.0 647.353920212755 647.353920212755 2.220128620013215 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {I|L}{I|L}Q 1.7156 - 120 1 1.08 42325.9 1.0 8328 4804 13122 HBL1_DMSO_200M_050219_2,13134 HBL1_DMSO_200M_050219_2,13134,LIYKWGLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13135 69.765 487.0 516130.0 25 0 63779.0 + -1 YFEYEYRMRQY 11 132 832.3628675974754 1662.7111822617508 2 832.8650390505791 MULTI CID FTMS 0 0 0 13122 397559.25 0.579235692210523 -1 0.1113204956054687 13 Oxidation (M) _YFEYEYRM(Oxidation (M))RQY_ REV__ENSG00000111962|ENST00000367463|UST;REV__ENST00000466695.1_1_6:149387353-149395249:+|nuORF 0.0 0.8751479354844584 4 [VP]GQY{M(Oxidation (M))|F}TE{I|L} 9 -1 34.897 0.0 0.0 2.0988 0.0 0.0 0.0 625.1751223624555 625.1751223624555 20.5117734211156 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.6382104921644451 0.0 [VP]GQY{M(Oxidation (M))|F}TE{I|L} 2.0988 - 4196 1 1.08 167495.2 1.0 8329 4804 13122 HBL1_DMSO_200M_050219_2,13135 HBL1_DMSO_200M_050219_2,13135,YFEYEYRMRQY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13136 69.768 136.0 805990.0 25 0 96356.0 -1 0 116 345.7189291046232 689.4233052760463 2 345.7184020876884 MULTI CID FTMS 0 0 0 13122 344047.03125 0.365914857854797 -2 0.1739730834960937 14 4 [{I|L}A]R{M(Oxidation (M))|F}{I|L}A 6 -1 + 46.122 0.0 0.0 6.69 6.69 93.36 0.0 0.0 0.0 7.622444108231292 17.931825014007224 7.622444108231292 46.122378575996166 0 1.1050541008457977 2.0 0.0 0.0 [{I|L}A]R{M(Oxidation (M))|F}{I|L}A 6.69 - 50 1 1.08 90894.4 1.0 8330 4804 13122 HBL1_DMSO_200M_050219_2,13136 HBL1_DMSO_200M_050219_2,13136, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13137 69.781 731.0 323880.0 25 0 67839.0 -1 0 94 1176.9851692824134 2351.955785631627 2 1176.984545886517 MULTI CID FTMS 0 0 0 13122 245496.78125 1.0 0 0.0 15 4 V{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DT{M(Oxidation (M))|F}V[HV] 11 -1 21.004 0.0 0.0 0.89306 0.0 0.0 1031.3553234317349 0.0 1031.3553234317349 0.0 14.014645007112886 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3807196863200844 V{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DT{M(Oxidation (M))|F}V[HV] 0.89306 - 188 + 1 1.08 159635.9 1.0 8331 4804 13122 HBL1_DMSO_200M_050219_2,13137 HBL1_DMSO_200M_050219_2,13137, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13138 69.785 242.0 658970.0 25 0 89709.0 + + 18675 ALLGDLTKA 9 149 451.2705243588499 900.5264957844998 2 451.2705566287041 MULTI CID FTMS 0 0 0 13122 277280.8125 0.2022925921991038 -2 0.1739730834960937 16 Unmodified _LAISDALKA_ ENSG00000105576|ENST00000425528|TNPO2;ENSG00000083312|ENST00000337273|TNPO1;nc|ENSG00000083312|Q92973-3|TNPO1;ENST00000423641.1_1_10:86150999-86151317:+|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;nc|ENSG00000083312|Q92973-2|TNPO1 29.081581746732265 0.1611639662936252 4 {I|L}A{I|L}GD{I|L}T[KA] 9 -1 + 71.423 0.0 0.0 7.9313 7.9313 96.54 0.0 0.0 0.0 40.47427710087657 5.944825567400315 5.944825567400315 37.39249331392329 0 0.4247425010840047 2.0 0.3054621874040891 0.2059771852360797 {I|L}A{I|L}GD{I|L}T[KA];{I|L}{I|L}QD{I|L}T[KA];{NN|[MP]|[D{I|L}]|[EV]}GT{I|L}K[RV];{NN|[MP]|[D{I|L}]|[EV]}G{I|L}TK[RV] 7.9313;3.779;2.6355;1.2935 -;-;-;- 405 + 1 1.08 124363.1 1.0 8332 4804 13122 HBL1_DMSO_200M_050219_2,13138 HBL1_DMSO_200M_050219_2,13138,LAISDALKA False False ALLGDLTKA 69.78511 451.270556628704 20671244.0 13122.0 ENSG00000105576|ENST00000425528|TNPO2;;ENSG00000083312|ENST00000337273|TNPO1;;nc|ENSG00000083312|Q92973-3|TNPO1;;ENST00000423641.1_1_10:86150999-86151317:+|nuORF;;nc|ENSG00000105576|O14787-2|TNPO2;;nc|ENSG00000083312|Q92973-2|TNPO1 5.404877503712972 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13139 69.798 727.0 257270.0 25 0 53024.0 -1 0 80 1163.836255113221 3488.486935939862 3 1164.173754870892 MULTI CID FTMS 0 0 0 13122 250564.015625 0.2501249213256128 -2 0.1739730834960937 17 4 GC(Carbamidomethyl (C)){M(Oxidation (M))|F}YG{[QN]|[E{I|L}]|[KN]}VVQQ 11 -1 25.895 0.0 0.0 0.7423 0.0 0.0 1417.481431780004 787.3786715143186 2204.8601032943225 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 GC(Carbamidomethyl (C)){M(Oxidation (M))|F}YG{[QN]|[E{I|L}]|[KN]}VVQQ 0.7423 - 734 + 1 1.08 145000.1 1.0 8333 4804 13122 HBL1_DMSO_200M_050219_2,13139 HBL1_DMSO_200M_050219_2,13139, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13140 69.804 332.0 307480.0 25 0 19243.0 + 2824 AVAAVLTQV 9 143 436.2667264796749 870.5189000261498 2 436.2669250369072 MULTI CID FTMS 0 0 0 13122 253105.515625 0.913611650640948 1 -0.0820770263671875 18 Unmodified _AVAAVLTQV_ ENSG00000147955|ENST00000277010|SIGMAR1;ENST00000378892.5_1_9:34637493-34637721:-|nuORF;ENST00000497006.1_1_9:34637208-34637655:-|nuORF;nc|ENSG00000147955|Q99720-2|SIGMAR1;nc|ENSG00000147955|Q99720-3|SIGMAR1;nc|ENSG00000147955|Q99720-4|SIGMAR1;nc|ENSG00000147955|Q99720-5|SIGMAR1 46.92087301778293 0.0471210510596396 4 {[VA]|[{I|L}G]}AAV 5 4 35.317 0.0 0.0 4.0571 0.0 0.0 0.0 456.2467497178092 456.2467497178092 21.77893321190093 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {[VA]|[{I|L}G]}AAV 4.0571 + + 303 1 1.08 82597.3 1.0 8334 4804 13122 HBL1_DMSO_200M_050219_2,13140 HBL1_DMSO_200M_050219_2,13140,AVAAVLTQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13141 69.807 75.0 403690.0 25 0 28359.0 + 8183 EPSAAQYF 8 67 456.7084905267382 911.4024281202765 2 456.7086364626884 MULTI CID FTMS 0 0 0 13122 212516.046875 0.1793920645686695 -11 1.1072998046875 19 Unmodified _EPSAAQYF_ REV__ENST00000258416.7_2_2:233415057-233415225:+|nuORF 9.347437153973935 0.7675937258251505 4 [EP]AA 4 -1 18.136 0.0 0.0 1.9899 0.0 0.0 0.0 540.2093793744358 540.2093793744358 3.443350238481031 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [EP]AA 1.9899 - 30 1 1.08 27361.1 1.0 8335 4804 13122 HBL1_DMSO_200M_050219_2,13141 HBL1_DMSO_200M_050219_2,13141,EPSAAQYF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13142 69.821 800.0 381740.0 25 0 43720.0 + 29463 QLIDLDHKL 9 279 365.5450595215675 1093.6133491649025 3 365.5450317263603 MULTI CID FTMS 0 0 0 13122 184129.859375 0.6791380453419875 -1 0.1113204956054687 20 Unmodified _QLIDLDHKL_ ENSG00000118096|ENST00000264021|IFT46;ENST00000531201.5_1_11:118415633-118427808:-|nuORF;nc|ENSG00000118096|Q9NQC8-2|IFT46 49.55428908609986 0.0413471690215031 4 [Q{I|L}]{I|L}D{I|L}DHK{I|L} 9 0 [Q{I|L}] + + 49.868 7.8265 3.2456 4.56 4.56 50.726 0.0 0.0 0.0 0.0 26.490645168971408 0.0 0.0 0 0.5215465369040708 0.0 1.1861818737241734 0.3897727294836955 + + [Q{I|L}]{I|L}D{I|L}DHK{I|L} 4.56 + + 784 + 1 1.08 239775.9 0.9200000166893004 8336 4804 13122 HBL1_DMSO_200M_050219_2,13142 HBL1_DMSO_200M_050219_2,13142,QLIDLDHKL True True QLIDLDHKL 69.8205 365.54503172636 1499014.75 13122.0 ENST00000531201.5_1_11:118415633-118427808:-|nuORF;;ENSG00000118096|ENST00000264021|IFT46;;nc|ENSG00000118096|Q9NQC8-2|IFT46 5.007033824920654 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13144 69.829 345.0 414450.0 25 0 34861.0 + 37386 TLADLVHHV 9 170 335.52245106176935 1003.545523785508 3 335.5222045779228 MULTI CID FTMS 0 0 0 13143 180394.625 0.4710121980682931 1 -0.1484222412109375 1 Unmodified _TLADLVHHV_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 30.22481116460888 0.1466181017706357 4 D{I|L}VHHV 6 3 28.717 0.0 0.0 2.8615 0.0 0.0 285.1686014147194 0.0 285.1686014147194 0.0 4.42368105803796 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + D{I|L}VHHV 2.8615 + + 399 + 1 1.08 118259.9 1.0 8337 4805 13143 HBL1_DMSO_200M_050219_2,13144 HBL1_DMSO_200M_050219_2,13144,TLADLVHHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13145 69.83 18.0 2449300.0 25 0 168400.0 + + 7914 KIQEILTQV 9 91 536.3256575438539 1070.6367621545078 2 536.3238403201103 MULTI CID FTMS 0 0 0 13143 1639065.875 1.0 0 0.0 2 Unmodified _ELQKLLTNL_ ENSG00000136231|ENST00000258729|IGF2BP3;nc|ENSG00000136231|O00425-2|IGF2BP3;ENST00000454907.1_1_6:167114584-167114857:-|nuORF 59.05245873256422 0.0266066919017776 4 {[QN]|[E{I|L}]|[KN]}QK{I|L}{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]} 9 -1 + 55.301 0.0 0.0 5.1652 5.1652 72.31 0.0 0.0 0.0 12.773660774661863 4.137342758552691 4.137342758552691 2.003187623076954 0 0.6139829889124311 0.958607314841775 0.9247425010840048 0.6505149978319906 {[QN]|[E{I|L}]|[KN]}QK{I|L}{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}Q{I|L}K{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}QK{I|L}{I|L}S[Q{I|L}];{[QN]|[E{I|L}]|[KN]}Q{I|L}K{I|L}S[K{I|L}];{[QN]|[E{I|L}]|[KN]}[AG]K{I|L}{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}[AG]{I|L}K{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}AAK{I|L}{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}AA{I|L}K{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]};[Q{I|L}]EK{I|L}{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}[AG]K{I|L}{I|L}S[Q{I|L}] 5.1652;4.9781;4.5452;4.3581;4.3052;4.1181;3.9721;3.785;3.7075;3.6852 +;-;-;-;-;-;-;-;-;- + 383 1 1.08 40737.5 1.0 8338 4805 13143 HBL1_DMSO_200M_050219_2,13145 HBL1_DMSO_200M_050219_2,13145,ELQKLLTNL False False KIQEILTQV 69.829916 536.32384032011 12758859.0 13143.0 ENSG00000136231|ENST00000258729|IGF2BP3;;nc|ENSG00000136231|O00425-2|IGF2BP3;;ENST00000454907.1_1_6:167114584-167114857:-|nuORF 3.9188257853190094 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13146 69.831 22.0 1463300.0 25 0 161750.0 + 37129 TGYLNTVTV 9 65 484.2583831501523 966.5022133671048 2 484.2588073611259 MULTI CID FTMS 0 0 0 13143 1354043.75 0.0038525795253702 23 -2.2993316650390625 3 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 25.399314129420983 0.2080152500878129 4 {I|L}CTV 4 6 28.589 0.0 0.0 2.9579 0.0 0.0 532.2869861715953 0.0 532.2869861715953 0.0 16.370090806403468 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}CTV 2.9579 - 59 + 1 1.08 30643.4 1.0 8339 4805 13143 HBL1_DMSO_200M_050219_2,13146 HBL1_DMSO_200M_050219_2,13146,TGYLNTVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13147 69.837 347.0 879640.0 25 0 57827.0 -1 0 144 1031.451409468261 3091.332399004984 3 1031.787280261517 MULTI CID FTMS 0 0 0 13143 776864.6875 0.343398429794671 -1 0.0820770263671875 4 4 [QT]PGYA[HS]Q[C(Carbamidomethyl (C))S]AA 13 -1 41.489 0.0 0.0 1.3421 0.0 0.0 0.0 1729.7595450321085 1729.7595450321085 -1.0079217453812106 0.0 -1.0079217453812106 0.0 0 0.0 0.0 2.135151878060193 0.2614393726401688 [QT]PGYA[HS]Q[C(Carbamidomethyl (C))S]AA 1.3421 - 335955 1 1.08 192365.5 1.0 8340 4805 13143 HBL1_DMSO_200M_050219_2,13147 HBL1_DMSO_200M_050219_2,13147, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13148 69.839 85.0 650130.0 25 0 51848.0 5562 DMLYTETDL 9 77 550.7460992918808 1099.4776456505615 2 550.7464477419853 MULTI CID FTMS 0 0 0 13143 559543.0 1.0 0 0.0 5 Unmodified _DMLYTETDL_ ENSG00000119203|ENST00000238112|CPSF3 7.910154910731844 0.6385446671287552 4 {I|L}{M(Oxidation (M))|F}G[KP]PC 7 8 29.737 0.0 0.0 2.7046 0.0 0.0 339.0895895425816 0.0 339.0895895425816 0.0 15.75720713938118 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}G[KP]PC 2.7046 - 71 + 1 1.08 50580.3 1.0 8341 4805 13143 HBL1_DMSO_200M_050219_2,13148 HBL1_DMSO_200M_050219_2,13148,DMLYTETDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13149 69.841 88.0 803010.0 25 0 97231.0 + 25043 MPTLPPPSV 9 115 469.7542392154372 937.4939254976744 2 469.7544738650322 MULTI CID FTMS 0 0 0 13143 390736.875 0.339775664440804 15 -1.4434967041015625 6 Unmodified _MPTLPPPSV_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 92.8221339359638 0.0138398038803217 4 {NN|[MP]|[D{I|L}]|[EV]}T{I|L}PPPSV 9 0 {NN|[MP]|[D{I|L}]|[EV]}T{I|L} + + 34.628 4.5129 1.0205 3.6937 3.6937 47.726 0.0 0.0 0.0 0.0 13.69325543266271 0.0 0.0 0 1.3494850021680094 0.0 1.174742501084005 0.0 + + {NN|[MP]|[D{I|L}]|[EV]}T{I|L}PPPSV 3.6937 + + 405 + 1 1.08 57948.3 1.0 8342 4805 13143 HBL1_DMSO_200M_050219_2,13149 HBL1_DMSO_200M_050219_2,13149,MPTLPPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13150 69.842 33.0 1135300.0 25 0 118530.0 + 38986 TVQLDGINL 9 77 486.77099058009895 971.527428226998 2 486.7708618044853 MULTI CID FTMS 0 0 0 13143 356382.625 0.4635587002586426 -1 0.0820770263671875 7 Unmodified _TVQLDGINL_ REV__ENSG00000185627|ENST00000532097|PSMD13;REV__ENST00000527047.5_1_11:237024-247462:+|nuORF;REV__nc|ENSG00000185627|Q9UNM6-2|PSMD13 21.74664581756881 0.2544899275067181 4 {NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}{[QG]|[NA]}{I|L}AGV 10 -1 {NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}{[QG]|[NA]}{I|L} + + 14.922 3.0374 0.41815 1.5359 1.5359 44.325 0.0 0.0 0.0 0.0 0.9421249706470308 0.0 0.0 0 0.0 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}{[QG]|[NA]}{I|L}AGV 1.5359 - 116 + 1 1.08 36348.4 1.0 8343 4805 13143 HBL1_DMSO_200M_050219_2,13150 HBL1_DMSO_200M_050219_2,13150,TVQLDGINL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13151 69.844 50.0 654250.0 25 0 64619.0 10572 FVIKIQDIN 9 68 545.3171335917162 1088.6197142502324 2 545.3169433474541 MULTI CID FTMS 0 0 0 13143 358359.78125 0.1275774452900029 -15 1.4976882934570312 8 Unmodified _FVIKIQDIN_ ENSG00000081138|ENST00000397968|CDH7 8.593279151180031 0.6146971463335029 4 VN{I|L} 3 7 10.87 0.0 0.0 0.99848 0.0 0.0 744.4117807558949 0.0 744.4117807558949 0.0 1.1919007788792104 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 VN{I|L} 0.99848 - 29 + 1 1.08 32514.7 1.0 8344 4805 13143 HBL1_DMSO_200M_050219_2,13151 HBL1_DMSO_200M_050219_2,13151,FVIKIQDIN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13152 69.853 530.0 217340.0 25 0 7435.4 -1 0 112 908.426684842578 1814.838816751956 2 908.4284545779228 MULTI CID FTMS 0 0 0 13143 296293.21875 1.0 0 0.0 9 4 [MN]PN{I|L}NEAQ[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L}{[QS]|[NT]} 15 -1 + 81.384 0.0 0.0 4.4844 4.4844 78.267 0.0 0.0 0.0 69.332750158095 0.9408556053930112 0.9408556053930112 9.030899869919438 0 0.9802046884880936 1.6989700043360187 0.3494850021680094 1.3807196863200843 [MN]PN{I|L}NEAQ[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PGG{I|L}NEAQ[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}GGEAQ[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEA[AG][Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEAQ[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}K{[CP]|[EA]};[MN]PN{I|L}NEA[HA]{[ET]|[MV]}{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}NEA[RH][YE]{I|L}{[QS]|[NT]};[MN]PN{I|L}NE{[{M(Oxidation (M))|F}H]|[RQ]}[QP]{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PN{I|L}[WQ]Q[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L}{[QS]|[NT]};[MN]PGG{I|L}NEAQ[Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}K{[CP]|[EA]} 4.4844;3.9868;3.9868;3.9868;3.7105;3.4357;3.3542;3.3173;3.2484;3.2129 -;-;-;-;-;-;-;-;-;- 1806 + 1 1.08 77656.9 1.0 8345 4805 13143 HBL1_DMSO_200M_050219_2,13152 HBL1_DMSO_200M_050219_2,13152, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13153 69.858 292.0 511920.0 25 0 36844.0 + 41509 VPNLKPLTV 9 162 490.81084205838 979.60713118356 2 490.8106567263603 MULTI CID FTMS 0 0 0 13143 233499.59375 0.8490623197145637 -2 0.1933975219726562 10 Unmodified _VPNLKPLTV_ ENSG00000142166|ENST00000270139|IFNAR1;nc|ENSG00000142166|P17181-2|IFNAR1;nc|ENSG00000142166|P17181-3|IFNAR1;nc|ENSG00000142166|P17181-4|IFNAR1 39.94969957227396 0.0757326808254658 4 VPN{I|L}K[{I|L}P]TV 9 0 + 63.739 0.0 0.0 6.5066 6.5066 81.296 0.0 0.0 0.0 29.488474775526186 3.979400086720375 3.979400086720375 3.979400086720375 0 0.2887254899964357 1.3010299956639813 0.5 0.4247425010840047 + + VPN{I|L}K[{I|L}P]TV;VPN{I|L}K[{I|L}P]S{I|L};VPGG{I|L}K[{I|L}P]TV;VPGG{I|L}K[{I|L}P]S{I|L};VPN{I|L}K[TP]{I|L}V;VPN{I|L}K[TP]V{I|L};VPGG{I|L}K[TP]{I|L}V;VVQPK[{I|L}P]TV;VPGG{I|L}K[TP]V{I|L};VVQPK[{I|L}P]S{I|L} 6.5066;6.1003;5.5666;5.1603;5.1276;4.7214;4.1876;3.9181;3.7814;3.5119 +;-;-;-;-;-;-;-;-;- + 874 + 1 1.08 117661.8 1.0 8346 4805 13143 HBL1_DMSO_200M_050219_2,13153 HBL1_DMSO_200M_050219_2,13153,VPNLKPLTV True True VPNLKPLTV 69.858474 490.81065672636 3145083.5 13143.0 nc|ENSG00000142166|P17181-2|IFNAR1;;nc|ENSG00000142166|P17181-4|IFNAR1;;ENSG00000142166|ENST00000270139|IFNAR1;;nc|ENSG00000142166|P17181-3|IFNAR1 6.580770015716553 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13154 69.869 610.0 402110.0 25 0 98563.0 -1 0 69 1066.0956183117946 3195.265025535584 3 1066.429736316204 MULTI CID FTMS 0 0 0 13143 228209.96875 0.0119136960251444 -3 0.2560501098632812 11 4 SS 2 -1 7.0783 0.0 0.0 0.22153 0.0 0.0 1972.724450439684 1045.4840792291627 3018.2085296688465 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SS 0.22153 - 92 + 1 1.08 214919.8 1.0 8347 4805 13143 HBL1_DMSO_200M_050219_2,13154 HBL1_DMSO_200M_050219_2,13154, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13155 69.879 582.0 219350.0 25 0 8039.8 -1 0 145 893.9137109777133 1785.8128690222266 2 894.4149047732353 MULTI CID FTMS 0 0 0 13143 212242.8125 1.0 0 0.0 12 4 [NP]{I|L}GGG{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}EN{I|L}NP 15 -1 81.244 0.0 0.0 4.5494 0.0 0.0 0.0 242.0570123974334 242.0570123974334 40.17071608101431 0.0 0.0 0.0 0 0.3252574989159953 1.154901959985743 0.0 1.4916440611282624 [NP]{I|L}GGG{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}EN{I|L}NP 4.5494 - 14562 1 1.08 85136.0 1.0 8348 4805 13143 HBL1_DMSO_200M_050219_2,13155 HBL1_DMSO_200M_050219_2,13155, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13156 69.883 209.0 296580.0 25 0 22896.0 + -1 DACVQFEKL 9 109 555.2679108834469 1108.5212688336935 2 555.2673828005791 MULTI CID FTMS 0 0 0 13143 170124.734375 0.8870785820212486 1 -0.1484222412109375 13 Carbamidomethyl (C) _DAC(Carbamidomethyl (C))VQFEKL_ REV__ENSG00000102401|ENST00000471229|ARMCX3 7.910154910731844 0.6385446671287552 4 {M(Oxidation (M))|F}{I|L}M 3 -1 16.198 0.0 0.0 1.4612 0.0 0.0 186.9562468636708 527.3377200246906 714.2939668883614 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}M 1.4612 - 92 + 1 1.08 51745.3 1.0 8349 4805 13143 HBL1_DMSO_200M_050219_2,13156 HBL1_DMSO_200M_050219_2,13156,DACVQFEKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13157 69.889 226.0 517600.0 25 0 28424.0 + 6083 DSQILPKI 8 136 457.271325564497 912.528098195794 2 457.2724487185478 MULTI CID FTMS 0 0 0 13143 163607.0625 0.0231689709073446 -6 0.5979766845703125 14 Unmodified _DSQILPKI_ ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF 46.020951573049366 0.1579632664462935 4 {[DS]|[MA]|[CV]|TT}Q{I|L}{I|L}PK{I|L} 8 0 {[DS]|[MA]|[CV]|TT}Q + + 27.568 9.4627 2.8665 3.0211 3.0211 45.971 0.0 0.0 0.0 0.0 11.370090806403468 0.0 0.0 0 0.6421590589602533 0.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}Q{I|L}{I|L}PK{I|L} 3.0211 + + 180 + 1 1.08 93892.3 1.0 8350 4805 13143 HBL1_DMSO_200M_050219_2,13157 HBL1_DMSO_200M_050219_2,13157,DSQILPKI False True DSQILPKI 69.888801 457.272448718548 343412640.0 13143.0 ENST00000456481.1_1_7:137407104-137407545:+|nuORF;;ENST00000489915.1_1_18:6462145-6462637:-|nuORF;;ENSG00000089009|ENST00000202773|RPL6 4.56619930267334 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13158 69.901 715.0 194040.0 25 0 11153.0 + -1 FYPTFKEGM 9 174 560.2622038563183 1118.5098547794364 2 560.7628661990166 MULTI CID FTMS 0 0 0 13143 142001.5 1.0 0 0.0 15 Carbamidomethyl (C) _FYPGYLC(Carbamidomethyl (C))SL_ ENSG00000119392|ENST00000309971|GLE1;nc|ENSG00000119392|Q53GS7-2|GLE1 23.1484247019978 0.2366544122328345 4 [{I|L}T]MKER{M(Oxidation (M))|F} 7 -1 18.611 0.0 0.0 1.6639 0.0 0.0 0.0 210.0239244418204 210.0239244418204 0.1672831997508161 0.0 0.0 0.0 0 0.3494850021680094 0.638272163982407 0.6549471895720985 0.0 [{I|L}T]MKER{M(Oxidation (M))|F} 1.6639 - 1517 1 1.08 111719.8 1.0 8351 4805 13143 HBL1_DMSO_200M_050219_2,13158 HBL1_DMSO_200M_050219_2,13158,FYPGYLCSL False False FYPTFKEGM 69.901212 560.762866199017 1392921.25 13143.0 ENSG00000119392|ENST00000309971|GLE1;;nc|ENSG00000119392|Q53GS7-2|GLE1 -0.4971994459629059 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13159 69.914 708.0 168650.0 25 0 8791.8 + 5143 DIIIVHFMII 10 157 607.355950189554 1212.697347445908 2 608.3390380740166 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _DIIIVHFMII_ REV__MER97b_dup20|chr2:97740228-97740619:+|1.0489492301760506|0.3406638822177393|1.62|48.0|14|3|sense 7.289230182591677 0.6929195370588109 4 [{I|L}P]P{[QS]|[NT]}{I|L}[YT]{I|L} 9 -1 21.955 0.0 0.0 1.8104 0.0 0.0 0.0 197.1127818540245 197.1127818540245 7.566029210303249 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.6505149978319906 0.2742275032520141 [{I|L}P]P{[QS]|[NT]}{I|L}[YT]{I|L} 1.8104 - 940 1 1.08 89456.0 1.0 8352 4805 13143 HBL1_DMSO_200M_050219_2,13159 HBL1_DMSO_200M_050219_2,13159,DIIIVHFMII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13160 69.927 800.0 236020.0 25 0 54874.0 -1 0 78 1133.7888981822323 3398.344865146898 3 1134.462817370892 MULTI CID FTMS 0 0 0 13143 122353.1953125 0.2156396485262457 -2 0.1933975219726562 17 4 E 1 -1 6.9897 0.0 0.0 0.20568 0.0 0.0 2742.1162761254027 524.1645009453794 3266.2807770707823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20568 - 44 + 1 1.08 155513.4 0.800000011920929 8353 4805 13143 HBL1_DMSO_200M_050219_2,13160 HBL1_DMSO_200M_050219_2,13160, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13161 69.942 800.0 203600.0 25 0 19539.0 -1 MYFWKRFCFWK 11 149 857.9041507075278 1713.7937484818556 2 858.4073364138603 MULTI CID FTMS 0 0 0 13143 109594.5703125 1.0 0 0.0 18 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 4 W{M(Oxidation (M))|F}{I|L}EAAKK{I|L} 9 -1 38.652 0.0 0.0 2.2553 0.0 0.0 609.1738369834949 0.0 609.1738369834949 0.0 14.32259217967929 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 W{M(Oxidation (M))|F}{I|L}EAAKK{I|L} 2.2553 - 2376 + 1 1.08 110122.4 0.9800000190734864 8354 4805 13143 HBL1_DMSO_200M_050219_2,13161 HBL1_DMSO_200M_050219_2,13161,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13162 69.956 800.0 199670.0 25 0 35315.0 -1 0 88 1137.4587604758524 2272.902968018505 2 1137.959521472454 MULTI CID FTMS 0 0 0 13143 87838.640625 0.7509480569391196 -1 0.0820770263671875 19 4 {[ET]|[MV]}ADK{M(Oxidation (M))|F}TE{I|L} 9 -1 33.07 0.0 0.0 1.455 0.0 0.0 0.0 1235.3691318423505 1235.3691318423505 17.624562618571254 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 {[ET]|[MV]}ADK{M(Oxidation (M))|F}TE{I|L} 1.455 - 525 1 1.08 104287.3 0.9200000166893004 8355 4805 13143 HBL1_DMSO_200M_050219_2,13162 HBL1_DMSO_200M_050219_2,13162, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13163 69.969 725.0 153050.0 25 0 8119.1 4848 DFRWQRRVLS 10 108 681.8710146794475 1361.727476425695 2 681.8715087771416 MULTI CID FTMS 0 0 0 13143 94592.9765625 1.0 0 0.0 20 Unmodified _DFRWQRRVLS_ ENSG00000112379|ENST00000251691|ARFGEF3 6.2057823575117 0.6979311171683138 4 {I|L}KVYY 5 9 28.047 0.0 0.0 2.0597 0.0 0.0 677.300584861525 0.0 677.300584861525 0.0 3.661968799114845 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}KVYY 2.0597 - 134 1 1.08 81472.9 1.0 8356 4805 13143 HBL1_DMSO_200M_050219_2,13163 HBL1_DMSO_200M_050219_2,13163,DFRWQRRVLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13165 69.973 2.2 17953000.0 25 0 3522300.0 + 25213 MVADKFTEL 9 75 527.2676911904107 1052.5208294476213 2 527.2686035037041 MULTI CID FTMS 0 0 0 13164 20136496.0 0.4758732351814607 1 -0.051361083984375 1 Unmodified _MVADKFTEL_ ENSG00000105568|ENST00000322088|PPP2R1A 13.90604991867851 0.4602628045680013 4 {[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}TE 6 5 34.188 0.0 0.0 3.2482 0.0 0.0 0.0 358.1777868052963 358.1777868052963 13.742209500285014 0.0 0.0 0.0 0 0.3494850021680094 0.0 1.1307196863200843 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}TE 3.2482 - 102 1 1.079 36291.9 1.0 8357 4806 13164 HBL1_DMSO_200M_050219_2,13165 HBL1_DMSO_200M_050219_2,13165,MVADKFTEL False True MVADKFTEL 69.973169 527.268603503704 612852800.0 13164.0 ENSG00000105568|ENST00000322088|PPP2R1A 4.903674125671387 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13166 69.974 16.0 4051000.0 25 0 563770.0 + 21932 LPPKVSVF 8 79 443.773538906193 885.532524879186 2 443.7736083865166 MULTI CID FTMS 0 0 0 13164 3829143.25 0.2234559416106783 30 -3.0396957397460938 2 Unmodified _LPPKVSVF_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 23.1484247019978 0.5573009939494978 4 {I|L}P[KP]SVV{M(Oxidation (M))|F} 8 2 + 50.36 0.0 0.0 5.6869 5.6869 86.576 0.0 0.0 0.0 22.467072242602484 5.583362792011997 5.583362792011997 12.552725051033056 0 0.3807196863200844 2.0 0.0 0.0 {I|L}P[KP]SVV{M(Oxidation (M))|F};{I|L}P[KP]SV{M(Oxidation (M))|F}V 5.6869;4.2694 -;- 181 + 1 1.079 58387.2 1.0 8358 4806 13164 HBL1_DMSO_200M_050219_2,13166 HBL1_DMSO_200M_050219_2,13166,LPPKVSVF False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13167 69.976 5.1 10164000.0 25 0 823070.0 + 21778 LPNAVITRI 9 72 498.8138193580857 995.6130857829714 2 498.8140136599541 MULTI CID FTMS 0 0 0 13164 10382718.0 0.2086585920719237 -5 0.539337158203125 3 Unmodified _LPNAVITRI_ ENSG00000148229|ENST00000374171|POLE3;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 32.037481411007896 0.1235546156350648 4 {I|L}PNAV{I|L}T[R{I|L}] 9 0 + 78.179 0.0 0.0 7.8524 7.8524 91.563 0.0 0.0 0.0 51.6467670607969 3.65279269351241 3.65279269351241 9.208187539523747 0 1.055462187404089 1.6989700043360187 0.0 0.0 + + {I|L}PNAV{I|L}T[R{I|L}];{I|L}PGGAV{I|L}T[R{I|L}];{I|L}PN{I|L}G{I|L}T[R{I|L}];{I|L}P{I|L}NG{I|L}T[R{I|L}];{I|L}PGG{I|L}G{I|L}T[R{I|L}];{I|L}P{I|L}GGG{I|L}T[R{I|L}];{I|L}P{I|L}A{[NV]|[RG]}T[R{I|L}] 7.8524;6.9275;6.8966;6.2676;5.9718;5.3427;4.989 +;-;-;-;-;-;- + 187 + 1 1.079 43304.6 1.0 8359 4806 13164 HBL1_DMSO_200M_050219_2,13167 HBL1_DMSO_200M_050219_2,13167,LPNAVITRI True True LPNAVITRI 69.975525 498.814013659954 3183981824.0 13164.0 ENSG00000148229|ENST00000374171|POLE3;;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 4.270906289418538 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13168 69.977 11.0 4383800.0 25 0 389530.0 + 18366 KVPEIEVTV 9 71 507.29746698919 1012.58038104518 2 507.2978393435478 MULTI CID FTMS 0 0 0 13164 4362864.0 0.9982835531719256 -1 0.1484222412109375 4 Unmodified _KVPEIEVTV_ nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;ENSG00000263001|ENST00000573035|GTF2I 26.268140514670165 0.1969607489560049 4 [EP]{I|L}EVKVTV 9 4 + 50.608 0.0 0.0 4.9979 4.9979 70.278 0.0 0.0 0.0 1.3344202192761545 9.889917747712644 1.3344202192761545 1.3344202192761545 0 0.7742275032520141 0.0 0.5752574989159953 0.0 [EP]{I|L}EVKVTV;{[TV]|[{I|L}S]}[HM]VKVTV;{[QN]|[E{I|L}]|[KN]}PEVKVTV;[EP]{I|L}EVTV{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}[HM]VTV{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}[RP]NTV{[QV]|[N{I|L}]|[RA]|[KV]};[HA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VKVTV;{[QN]|[E{I|L}]|[KN]}PEVTV{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}[RP]GGTV{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}[RP]{I|L}{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]} 4.9979;4.8661;4.1221;3.4648;3.333;3.0357;2.7254;2.589;2.1264;1.334 -;-;-;-;-;-;-;-;-;- 272 1 1.079 42968.4 1.0 8360 4806 13164 HBL1_DMSO_200M_050219_2,13168 HBL1_DMSO_200M_050219_2,13168,KVPEIEVTV False False KVPEIEVTV 69.976705 507.297839343548 68833312.0 13164.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 4.011311213175456 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13169 69.978 20.0 2059600.0 25 0 166560.0 + 22673 LPYTQSVQI 9 73 524.7875448131691 1047.560536693138 2 524.7885009646416 MULTI CID FTMS 0 0 0 13164 2135550.0 0.8415764914234507 -1 0.1484222412109375 5 Unmodified _LPYTQSVQI_ ENSG00000121057|ENST00000337714|AKAP1 34.93206674587334 0.1032771302489716 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TQ{I|L}SVQ{I|L} 9 2 + 62.079 0.0 0.0 5.926 5.926 85.379 0.0 0.0 0.0 12.95634963777274 26.90944842843617 12.95634963777274 9.208187539523747 0 0.6549471895720985 1.0457574905606752 1.6989700043360187 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TQ{I|L}SVQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T[AG]{I|L}SVQ{I|L};[AG]T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SVQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[QT]SVQ{I|L};[{I|L}P]Y[QT]SVQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WR]SVQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TQ{I|L}[PA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[QT]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SVQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))R]VQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TQ[PA]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 5.926;5.047;4.2429;3.5163;3.397;3.3534;3.2029;3.0277;2.8979;2.7474 -;-;-;-;+;-;-;-;-;- + 427 1 1.079 41376.9 1.0 8361 4806 13164 HBL1_DMSO_200M_050219_2,13169 HBL1_DMSO_200M_050219_2,13169,LPYTQSVQI True True LPYTQSVQI 69.977884 524.788500964642 18565800.0 13164.0 ENSG00000121057|ENST00000337714|AKAP1 4.074573516845703 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13170 69.979 21.0 1892700.0 25 0 139670.0 + 36196 SVVSPSSFENV 11 73 576.2819164997713 1150.5492800663426 2 576.2830078005791 MULTI CID FTMS 0 0 0 13164 1673958.75 0.4355442671471648 2 -0.1812591552734375 6 Unmodified _SVVSPSSFENV_ ENSG00000070831|ENST00000656825|CDC42;nc|ENSG00000289694|P60953-1|CDC42 20.41453444215458 0.6105011870913812 4 [VS]V[DV]Y{I|L}E{NN|[MP]|[D{I|L}]|[EV]} 10 6 + 49.666 0.0 0.0 4.3167 4.3167 82.626 0.0 0.0 0.0 20.0 0.7918124604762511 0.7918124604762511 21.760912590556813 0 0.0 2.0 0.0 0.0 [VS]V[DV]Y{I|L}E{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]E{I|L}Y[DV][PA]V 4.3167;2.4254 -;- 102 1 1.079 37149.5 1.0 8362 4806 13164 HBL1_DMSO_200M_050219_2,13170 HBL1_DMSO_200M_050219_2,13170,SVVSPSSFENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13171 69.98 24.0 1497500.0 25 0 193900.0 + -1 AVGAPFSCTSV 11 77 548.2620410948396 1094.509529256479 2 548.2626220583916 MULTI CID FTMS 0 0 0 13164 1734287.125 0.7242318055922402 1 -0.051361083984375 7 Carbamidomethyl (C) _AVGAPFSC(Carbamidomethyl (C))TSV_ REV__ENSG00000138468|ENST00000394095|SENP7;REV__nc|ENSG00000138468|Q9BQF6-2|SENP7;REV__nc|ENSG00000138468|Q9BQF6-4|SENP7;REV__nc|ENSG00000138468|Q9BQF6-5|SENP7 17.11289562659939 0.6791789249425932 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 -1 27.988 0.0 0.0 2.5572 0.0 0.0 0.0 751.2733591727477 751.2733591727477 1.5739965194865135 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 2.5572 - 42 1 1.079 34150.3 1.0 8363 4806 13164 HBL1_DMSO_200M_050219_2,13171 HBL1_DMSO_200M_050219_2,13171,AVGAPFSCTSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13172 69.981 31.0 1651800.0 25 0 78567.0 + 29575 QLREAFEQL 9 82 567.3009474835255 1132.587342033851 2 567.3015014529228 MULTI CID FTMS 0 0 0 13164 1367853.25 0.8266523981308278 1 -0.051361083984375 8 Unmodified _QLREAFEQL_ ENSG00000122952|ENST00000373944|ZWINT;nc|ENSG00000122952|O95229-2|ZWINT 65.23502041540118 0.0231836506122253 4 {M(Oxidation (M))|F}EQ{I|L} 4 5 35.547 0.0 0.0 3.1386 0.0 0.0 597.3257313459 0.0 597.3257313459 0.0 25.65891761600088 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.0 + {M(Oxidation (M))|F}EQ{I|L} 3.1386 + + 66 1 1.079 45534.6 1.0 8364 4806 13164 HBL1_DMSO_200M_050219_2,13172 HBL1_DMSO_200M_050219_2,13172,QLREAFEQL True True QLREAFEQL 69.981419 567.301501452923 28877482.0 13164.0 chr10:56358947-56359687|23|15.57|0.17|6.55|-|0|ZWINT,ZWINT|1;;nc|ENSG00000122952|O95229-2|ZWINT;;ENSG00000122952|ENST00000373944|ZWINT 5.498515129089356 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13173 69.983 28.0 1487300.0 25 0 146340.0 + 4917 DGLAPPQHLI 10 84 530.7918401942215 1059.569127455243 2 530.7924682497978 MULTI CID FTMS 0 0 0 13164 1140544.875 0.3750364376064048 2 -0.1812591552734375 9 Unmodified _DGLAPPQHLI_ ENSG00000141510|ENST00000269305|TP53;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53;nc|ENSG00000141510|P04637-4|TP53;nc|ENSG00000141510|P04637-5|TP53;nc|ENSG00000141510|P04637-6|TP53;nc|ENSG00000141510|P04637-7|TP53;nc|ENSG00000141510|P04637-8|TP53;nc|ENSG00000141510|P04637-9|TP53 17.11289562659939 0.5604042439455784 4 {[RE]|[WV]}AP[YK]PS{I|L} 9 7 + 29.077 0.0 0.0 2.7442 2.7442 64.038 0.0 0.0 0.0 7.147642715192507 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.8252574989159953 0.0 0.2742275032520141 0.0 {[RE]|[WV]}AP[YK]PS{I|L};{[RE]|[WV]}AP[YK]PTV;{[RE]|[WV]}AP[QP][H{I|L}]{I|L} 2.7442;2.578;2.2278 -;-;- 127 + 1 1.079 38438.4 1.0 8365 4806 13164 HBL1_DMSO_200M_050219_2,13173 HBL1_DMSO_200M_050219_2,13173,DGLAPPQHLI False True DGLAPPQHLI 69.982598 530.792468249798 51624880.0 13164.0 nc|ENSG00000141510|P04637-3|TP53;;nc|ENSG00000141510|P04637-8|TP53;;nc|ENSG00000141510|P04637-4|TP53;;ENSG00000141510|ENST00000269305|TP53;;nc|ENSG00000141510|P04637-7|TP53;;ENST00000505014.5_1_17:7578140-7579834:-|nuORF;;nc|ENSG00000141510|P04637-9|TP53;;nc|ENSG00000141510|P04637-2|TP53;;nc|ENSG00000141510|P04637-6|TP53;;nc|ENSG00000141510|P04637-5|TP53 5.206497510274251 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13174 69.984 67.0 1528600.0 25 0 173830.0 + 21922 LPPHIIRL 8 87 320.2117583217455 957.6134455654365 3 320.2114745974541 MULTI CID FTMS 0 0 0 13164 1020918.0 0.1347567570564226 36 -3.601997375488281 10 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 22.736283301280096 0.5659792798204337 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 0 + 62.384 0.0 0.0 6.5145 6.5145 85.111 0.0 0.0 0.0 51.41441272380455 3.4948500216800937 3.4948500216800937 7.257724967479859 0 0.4247425010840047 1.3979400086720375 0.0 0.0 + + {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 6.5145;5.7566;5.4422;3.6681 +;-;-;- + 93 + 1 1.079 86395.2 1.0 8366 4806 13164 HBL1_DMSO_200M_050219_2,13174 HBL1_DMSO_200M_050219_2,13174,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13175 69.985 45.0 901270.0 25 0 98278.0 + 2206 AQAPSSFQL 9 76 474.7430851483264 947.4716173634528 2 474.7431213259697 MULTI CID FTMS 0 0 0 13164 837081.1875 0.3213244760150416 2 -0.1812591552734375 11 Unmodified _AQAPSSFQL_ ENSG00000100714|ENST00000652337|MTHFD1 30.63653989081413 0.1413794767160703 4 [QA]A[RD]{M(Oxidation (M))|F}Q{I|L} 8 3 [QA]A[RD]{M(Oxidation (M))|F} + + 20.701 16.4 2.3826 2.1849 2.1849 44.732 0.0 0.0 0.0 0.0 4.30137532970711 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 [QA]A[RD]{M(Oxidation (M))|F}Q{I|L} 2.1849 - 45 + 1 1.079 37183.2 1.0 8367 4806 13164 HBL1_DMSO_200M_050219_2,13175 HBL1_DMSO_200M_050219_2,13175,AQAPSSFQL False True AQAPSSFQL 69.985434 474.74312132597 23427228.0 13164.0 ENSG00000100714|ENST00000652337|MTHFD1 5.122741222381592 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13176 69.988 101.0 900850.0 25 0 160810.0 + 14894 ILLENFSAEK 10 77 582.3197938932963 1162.6250348533924 2 582.3198730349541 MULTI CID FTMS 0 0 0 13164 862023.375 0.6851778567570008 -2 0.230499267578125 12 Unmodified _ILLENFSAEK_ ENST00000560979.1_1_15:49715501-49715549:+|nuORF 53.31671820480216 0.0606844387689228 4 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK 10 0 + 109.37 0.0 0.0 9.4071 9.4071 87.945 0.0 0.0 0.0 36.53212513775344 4.383548415667249 4.383548415667249 4.383548415667249 0 0.8494850021680094 2.0 1.045114016114533 0.5297966019298022 + + {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SNT{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SGGT{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SNT{I|L};{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SA[SG]{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SGGT{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SA[SG]{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{NN|[MP]|[D{I|L}]|[EV]}SAEK;{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{NN|[MP]|[D{I|L}]|[EV]}SNT{I|L} 9.4071;9.0301;8.6189;8.2418;8.2418;7.9784;7.1561;6.8927;5.4092;5.0322 +;-;-;-;-;-;-;-;-;- + 233 + 1 1.079 72228.4 1.0 8368 4806 13164 HBL1_DMSO_200M_050219_2,13176 HBL1_DMSO_200M_050219_2,13176,ILLENFSAEK True True ILLENFSAEK 69.987615 582.319873034954 28274990.0 13164.0 ENST00000560979.1_1_15:49715501-49715549:+|nuORF 6.277821222941081 2.0 True 10.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13177 69.989 46.0 1130400.0 25 0 93492.0 + 26156 NPYEMIRGV 9 76 539.7705206573555 1077.526488381511 2 539.7708618044853 MULTI CID FTMS 0 0 0 13164 795689.4375 0.9651821855595571 -1 0.1484222412109375 13 Unmodified _NPYEMIRGV_ ENSG00000137200|ENST00000373451|CMTR1 53.832793166522166 0.0319663582346103 4 NPYEM{I|L} 6 3 66.988 0.0 0.0 6.2168 0.0 0.0 0.0 327.17942224674067 327.17942224674067 53.00820653692661 0.0 0.0 0.0 0 0.6989700043360187 1.3979400086720375 0.4247425010840047 0.0 + NPYEM{I|L} 6.2168 + + 77 + 1 1.079 47193.3 1.0 8369 4806 13164 HBL1_DMSO_200M_050219_2,13177 HBL1_DMSO_200M_050219_2,13177,NPYEMIRGV True True NPYEMIRGV 69.988888 539.770861804485 8354950.0 13164.0 ENSG00000137200|ENST00000373451|CMTR1 7.224539756774902 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13178 69.991 67.0 886110.0 25 0 134830.0 + 24088 LYHFSSSEL 9 84 541.7614798274525 1081.508406721705 2 541.7613403201103 MULTI CID FTMS 0 0 0 13164 750397.6875 0.5943754652236014 -2 0.230499267578125 14 Unmodified _LYHFSSSEL_ ENSG00000105173|ENST00000262643|CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1 38.15118350030904 0.0856056900103839 4 {[WN]|[YH]}{I|L}{M(Oxidation (M))|F}SSS{[QN]|[E{I|L}]|[KN]} 9 2 + 43.139 0.0 0.0 3.9888 3.9888 68.411 0.0 0.0 0.0 2.430380486862944 4.762036441594191 2.430380486862944 2.430380486862944 0 0.0 0.0 1.3807196863200843 0.0 {[WN]|[YH]}{I|L}{M(Oxidation (M))|F}SSS{[QN]|[E{I|L}]|[KN]};{[{M(Oxidation (M))|F}H]|[RQ]}[Y{I|L}]SSS{[QN]|[E{I|L}]|[KN]};[AG]{[RE]|[WV]}{M(Oxidation (M))|F}SSS{[QN]|[E{I|L}]|[KN]};{[{M(Oxidation (M))|F}H]|[RQ]}S[Y{I|L}]SS{[QN]|[E{I|L}]|[KN]};{[{M(Oxidation (M))|F}H]|[RQ]}SS[Y{I|L}]S{[QN]|[E{I|L}]|[KN]};{[WN]|[YH]}{I|L}{[ES]|[DT]|[{I|L}C]}SS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[WN]|[YH]}AS[Y{I|L}]S{[QN]|[E{I|L}]|[KN]};{[WN]|[YH]}A[Y{I|L}]SS{[QN]|[E{I|L}]|[KN]};[AG]{[RE]|[WV]}{[ES]|[DT]|[{I|L}C]}SS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[WN]|[YH]}{I|L}Q{[{M(Oxidation (M))|F}D]|MM}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.9888;3.764;3.2896;3.2073;2.9001;2.2102;1.6694;1.6246;1.511;1.4916 -;-;-;-;-;-;-;-;-;- 312 1 1.079 49650.3 1.0 8370 4806 13164 HBL1_DMSO_200M_050219_2,13178 HBL1_DMSO_200M_050219_2,13178,LYHFSSSEL True True LYHFSSSEL 69.990507 541.76134032011 10963503.0 13164.0 ENSG00000105173|ENST00000262643|CCNE1;;nc|ENSG00000105173|P24864-2|CCNE1;;nc|ENSG00000105173|P24864-3|CCNE1 5.655608574549357 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13179 69.992 62.0 899590.0 25 0 54038.0 + 26187 NQFPGFKEV 9 98 533.2719200115437 1064.5292870898872 2 533.2720214724541 MULTI CID FTMS 0 0 0 13164 699438.25 0.0280706459467345 8 -0.8310317993164062 15 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 20.41453444215458 0.284085796332423 4 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}K[WP] 8 4 + 36.387 0.0 0.0 3.4182 3.4182 78.592 0.0 0.0 0.0 17.391143015546646 4.4504625720438895 4.4504625720438895 14.179252333050016 0 1.0 0.0 0.0 0.2742275032520141 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}K[WP];[Y{I|L}][KA]{[CP]|[EA]}{M(Oxidation (M))|F}[HS];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[PG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[CP]|[EA]}T[VG]TV;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{I|L}T]{M(Oxidation (M))|F}[HS];[Y{I|L}]{[QG]|[NA]}[{I|L}T]{M(Oxidation (M))|F}[HS];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[CP]|[EA]}T[VG]S{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P[R{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}TV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[TV]|[{I|L}S]}{[CP]|[EA]}{M(Oxidation (M))|F}[HS] 3.4182;2.0862;1.8626;1.7029;1.6025;1.5206;1.4902;1.2074;0.97189;0.90292 -;-;-;-;-;-;-;-;-;- 282 + 1 1.079 48589.4 1.0 8371 4806 13164 HBL1_DMSO_200M_050219_2,13179 HBL1_DMSO_200M_050219_2,13179,NQFPGFKEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13180 70.0 418.0 303430.0 25 0 69630.0 -1 0 52 1107.113263601947 3318.317961406041 3 1107.782519519329 MULTI CID FTMS 0 0 0 13164 663759.5625 0.1498830674880705 3 -0.2747116088867187 16 4 {M(Oxidation (M))|F}YC(Carbamidomethyl (C)) 3 -1 13.188 0.0 0.0 0.39742 0.0 0.0 1310.4410825992034 1534.6992891901002 2845.140371789304 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}YC(Carbamidomethyl (C)) 0.39742 - 16 + 1 1.079 111203.1 1.0 8372 4806 13164 HBL1_DMSO_200M_050219_2,13180 HBL1_DMSO_200M_050219_2,13180, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13181 70.008 452.0 346580.0 25 0 101780.0 -1 0 61 1133.7888981822323 3398.344865146898 3 1134.123706042767 MULTI CID FTMS 0 0 0 13164 616235.375 0.9727443584914408 -1 0.1484222412109375 17 4 C(Carbamidomethyl (C)){M(Oxidation (M))|F} 2 -1 7.9588 0.0 0.0 0.2342 0.0 0.0 1022.3477044897407 2065.861887638129 3088.2095921278697 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){M(Oxidation (M))|F} 0.2342 - 55 + 1 1.079 136129.6 1.0 8373 4806 13164 HBL1_DMSO_200M_050219_2,13181 HBL1_DMSO_200M_050219_2,13181, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13182 70.009 72.0 909760.0 25 0 176110.0 36534 TAHVPPSLL 9 90 467.77147392708576 933.5283949209716 2 467.7714111208916 MULTI CID FTMS 0 0 0 13164 500084.84375 0.0202948044111633 6 -0.59796142578125 18 Unmodified _TAHVPPSLL_ ENST00000335181.9_3_15:72492943-72494801:-|nuORF 23.1484247019978 0.2366544122328345 4 [TA]YK[EP]{I|L}{I|L} 8 4 [TA] + + 21.956 -1.6723 -0.97175 2.3519 2.3519 44.929 0.0 0.0 0.0 0.0 9.252509456924823 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 [TA]YK[EP]{I|L}{I|L} 2.3519 - 152 + 1 1.079 57594.6 1.0 8374 4806 13164 HBL1_DMSO_200M_050219_2,13182 HBL1_DMSO_200M_050219_2,13182,TAHVPPSLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13183 70.011 95.0 851730.0 25 0 142900.0 + 18832 LASLAAALVL 10 101 471.3052488648318 940.5959447964636 2 471.3052551150322 MULTI CID FTMS 0 0 0 13164 500333.1875 0.5853230447472482 -2 0.230499267578125 19 Unmodified _LASLAAALVL_ ENST00000471809.5_1_22:37159849-37172159:-|nuORF;ENST00000476548.1_1_22:37168757-37172063:-|nuORF 34.10243960390752 0.2198439752719791 4 [{I|L}A][VS]RV 6 6 37.553 0.0 0.0 3.9925 0.0 0.0 0.0 312.19171085844624 312.19171085844624 17.626656038284448 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.066901560044258 0.0 [{I|L}A][VS]RV 3.9925 - 388 1 1.079 66362.5 1.0 8375 4806 13164 HBL1_DMSO_200M_050219_2,13183 HBL1_DMSO_200M_050219_2,13183,LASLAAALVL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13184 70.02 498.0 185570.0 25 0 43205.0 -1 0 62 1114.7795421227474 3341.3167969684428 3 1115.116381824017 MULTI CID FTMS 0 0 0 13164 505203.125 0.4752057613168724 1 -0.051361083984375 20 4 G 1 -1 6.9897 0.0 0.0 0.20919 0.0 0.0 1799.6427990209802 1481.6452866089114 3281.288085629892 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20919 - 18 + 1 1.079 83569.0 1.0 8376 4806 13164 HBL1_DMSO_200M_050219_2,13184 HBL1_DMSO_200M_050219_2,13184, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13186 70.025 23.0 2164000.0 25 0 254800.0 + 3703 DAFLEAAKKI 10 85 553.3158952931525 1104.617237653105 2 553.3164550662041 MULTI CID FTMS 0 0 0 13185 1748579.375 0.2741820189605861 2 -0.2233505249023437 1 Unmodified _DAFLEAAKKI_ ENSG00000119396|ENST00000373840|RAB14 38.61474834105838 0.1721950110283317 4 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}EAAKK{I|L} 10 0 + 80.099 0.0 0.0 7.2513 7.2513 94.301 0.0 0.0 0.0 63.90092514408778 9.744237387763093 9.744237387763093 25.22878745280337 0 1.424742501084005 1.2218487496163564 0.4247425010840047 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}EAAKK{I|L};W{M(Oxidation (M))|F}{I|L}[RD]KK{I|L} 7.2513;4.9673 +;- + 127 + 1 1.079 42776.2 1.0 8377 4807 13185 HBL1_DMSO_200M_050219_2,13186 HBL1_DMSO_200M_050219_2,13186,DAFLEAAKKI False True DAFLEAAKKI 70.024527 553.316455066204 83034736.0 13185.0 ENSG00000119396|ENST00000373840|RAB14 6.847750186920166 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13187 70.026 22.0 2202300.0 25 0 382240.0 + 25629 NFPEKISSL 9 63 517.7787940831879 1033.5430352331755 2 517.7797729372978 MULTI CID FTMS 0 0 0 13185 1961711.625 0.8032941642562422 2 -0.2233505249023437 2 Unmodified _NFPEKISSL_ ENST00000420672.1_1_2:179278757-179278808:+|nuORF 29.081581746732265 0.1611639662936252 4 [EP]K{I|L}SS{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 9 4 + 33.918 0.0 0.0 3.2817 3.2817 77.451 0.0 0.0 0.0 3.7409842324510194 -2.852357284807489 -2.852357284807489 11.76091259055682 0 0.0 0.0 0.805462187404089 0.0 [EP]K{I|L}SS{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[VS][PA]{I|L}SS{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[EP]K{I|L}{[WT]|[RM]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}P[HA]{I|L}[PA][PA];[EP]K{[WT]|[RM]}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[VS][PA]{I|L}{[WT]|[RM]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 3.2817;2.1438;1.3462;1.0535;1.0123;0.20302 -;-;-;-;-;- 76 1 1.079 43662.9 1.0 8378 4807 13185 HBL1_DMSO_200M_050219_2,13187 HBL1_DMSO_200M_050219_2,13187,NFPEKISSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13188 70.027 37.0 1774400.0 25 0 202100.0 + 43034 VYAFSARPL 9 74 512.2849283693483 1022.5553038054968 2 512.2850219607353 MULTI CID FTMS 0 0 0 13185 1275399.375 0.9836475456616602 1 -0.1298980712890625 3 Unmodified _VYAFSARPL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 30.7034409873982 0.1405282614900322 4 VYA{M(Oxidation (M))|F}SAR[{I|L}P] 9 0 + 82.898 0.0 0.0 8.1069 8.1069 96.297 0.0 0.0 0.0 64.20100967372576 3.2568864632742844 3.2568864632742844 26.025684359364405 0 0.9247425010840048 2.0 0.3807196863200844 0.0 + + VYA{M(Oxidation (M))|F}SAR[{I|L}P];VYA{M(Oxidation (M))|F}[WK][{I|L}P];VY{I|L}[WK]V{[ES]|[DT]|[{I|L}C]};VY{I|L}[WK]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VQ[VS]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[AG][VS]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 8.1069;5.5618;5.4396;5.3186;3.945;3.0445 +;-;-;-;-;- + 175 + 1 1.079 56472.7 1.0 8379 4807 13185 HBL1_DMSO_200M_050219_2,13188 HBL1_DMSO_200M_050219_2,13188,VYAFSARPL False True VYAFSARPL 70.026884 512.285021960735 31617384.0 13185.0 nc|ENSG00000233276|P07203-2|GPX1;;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;;ENSG00000233276|ENST00000419783|GPX1 7.381155172983806 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13189 70.029 121.0 1013000.0 25 0 95785.0 + 2218 AQCPIVERL 9 118 514.7818559110956 0 514.7817870974541 PEAK CID FTMS 0 0 0 13185 842801.4375 0.6964812592174577 -4 0.3931808471679687 4 Unmodified _AQCPIVERL_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF 53.832793166522166 0.0232989711577274 4 CR 2 7 25.459 0.0 0.0 2.4776 0.0 0.0 199.0949781783974 566.3307589166624 765.4257370950597 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.75 CR 2.4776 - 142 + 1 1.079 99108.4 1.0 8380 4807 13185 HBL1_DMSO_200M_050219_2,13189 HBL1_DMSO_200M_050219_2,13189,AQCPIVERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13190 70.031 69.0 1013400.0 25 0 245410.0 + 12404 GTIGLIHAV 9 86 440.7661659458888 879.5177789585775 2 440.7663452029228 MULTI CID FTMS 0 0 0 13185 792392.3125 0.0381913507656081 -3 0.2818603515625 5 Unmodified _GTIGLIHAV_ ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF 49.66892048692302 0.0410958345688192 4 {[SA]|[TG]}{I|L}G{I|L}{I|L}H{[VA]|[{I|L}G]} 9 0 + 49.944 0.0 0.0 5.6785 5.6785 87.404 0.0 0.0 0.0 1.2814469716013122 2.922152515121219 1.2814469716013122 16.121053764100992 0 0.7302046884880937 1.5228787452803376 0.0 0.0 + + {[SA]|[TG]}{I|L}G{I|L}{I|L}H{[VA]|[{I|L}G]};[H{I|L}]AVA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]G{I|L}A{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]AV{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]{I|L}GA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]AG{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]A{I|L}G{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[HA]{I|L}VA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]Q{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}H{I|L}A{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.6785;3.8456;3.227;3.161;3.1029;3.0508;2.9608;2.7986;2.6643;2.6084 +;-;-;-;-;-;-;-;-;- + 398 + 1 1.079 60759.8 1.0 8381 4807 13185 HBL1_DMSO_200M_050219_2,13190 HBL1_DMSO_200M_050219_2,13190,GTIGLIHAV True True GTIGLIHAV 70.031029 440.766345202923 533116416.0 13185.0 ENSG00000154277|ENST00000284440|UCHL1;;ENST00000512419.5_1_4:41258929-41270087:+|nuORF 4.307368755340576 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13191 70.034 155.0 341800.0 25 0 41522.0 + + -1 IQWSDDENTATL 12 93 696.8165954331951 1391.61863793319 2 696.8177368044853 MULTI CID FTMS 0 0 0 13185 649532.375 1.0 0 0.0 6 2 Carbamidomethyl (C) _QLC(Carbamidomethyl (C))C(Carbamidomethyl (C))QDISQQL_ ENSG00000151465|ENST00000281141|CDC123 13.042465956692816 0.7638483625850725 4 [Q{I|L}]WSDDENT 9 -1 32.922 0.0 0.0 2.3657 0.0 0.0 0.0 300.1490486397901 300.1490486397901 0.1769305536495196 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.9247425010840048 0.3807196863200844 [Q{I|L}]WSDDENT 2.3657 - 511 1 1.079 47741.0 1.0 8382 4807 13185 HBL1_DMSO_200M_050219_2,13191 HBL1_DMSO_200M_050219_2,13191,QLCCQDISQQL False False IQWSDDENTATL 70.034108 696.817736804485 5595020.0 13185.0 ENSG00000151465|ENST00000281141|CDC123 7.803772767384847 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13192 70.035 45.0 1169800.0 25 0 117080.0 + 22683 LQAPELANV 9 92 477.7664768591419 0 477.7663452029228 PEAK CID FTMS 0 0 0 13185 623509.875 1.0 0 0.0 7 Unmodified _LQAPELANV_ ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1 18.1463463914782 0.2188250594445807 4 {I|L}QAP 4 5 14.702 0.0 0.0 1.5419 0.0 0.0 302.15757422434007 239.104303228186 541.261877452526 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}QAP 1.5419 + + 216 + 1 1.079 47046.8 1.0 8383 4807 13185 HBL1_DMSO_200M_050219_2,13192 HBL1_DMSO_200M_050219_2,13192,LQAPELANV False True LQAPELANV 70.035344 477.766345202923 8582840.0 13185.0 nc|ENSG00000148840|Q5VV67-2|PPRC1;;ENSG00000148840|ENST00000278070|PPRC1 1.5281124114990234 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13193 70.043 404.0 462460.0 25 0 74068.0 + 37926 TLYERGFENI 10 136 621.3117349518457 0 621.3118163943291 PEAK CID FTMS 0 0 0 13185 553654.75 1.0 0 0.0 8 Unmodified _TLYERGFENI_ ENSG00000119777|ENST00000238788|TMEM214;ENST00000478980.1_1_2:27256012-27257182:+|nuORF;ENST00000495312.1_1_2:27255799-27258254:+|nuORF;nc|ENSG00000119777|Q6NUQ4-2|TMEM214 100.7086487251713 0.0002262044460348 4 Y{I|L}{M(Oxidation (M))|F}NDEN 7 7 37.362 0.0 0.0 3.0116 0.0 0.0 214.13042617063417 128.07227502994377 342.202701200578 0.0 0.0 0.0 0.0 0 1.8979400086720373 0.0 0.9247425010840048 1.329689690656103 Y{I|L}{M(Oxidation (M))|F}NDEN 3.0116 - 4574 + 1 1.079 140205.9 1.0 8384 4807 13185 HBL1_DMSO_200M_050219_2,13193 HBL1_DMSO_200M_050219_2,13193,TLYERGFENI True True TLYERGFENI 70.042596 621.311816394329 4063784.75 13185.0 ENST00000495312.1_1_2:27255799-27258254:+|nuORF;;ENSG00000119777|ENST00000238788|TMEM214;;nc|ENSG00000119777|Q6NUQ4-2|TMEM214;;ENST00000478980.1_1_2:27256012-27257182:+|nuORF 6.958388169606526 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13194 70.044 70.0 905400.0 25 0 166790.0 + 21350 DGYKPLEL 8 92 467.747668177249 933.480783421298 2 467.7479125857353 MULTI CID FTMS 0 0 0 13185 524443.75 1.0 0 0.0 9 Unmodified _LPFGWAML_ ENSG00000138399|ENST00000453153|FASTKD1;nc|ENSG00000138399|Q53R41-2|FASTKD1 17.086550045450526 0.6584923310065985 4 [{I|L}P]EK 4 6 19.965 0.0 0.0 2.1388 0.0 0.0 0.0 463.18336455826994 463.18336455826994 4.480844613864647 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}P]EK 2.1388 - 147 1 1.079 53482.4 1.0 8385 4807 13185 HBL1_DMSO_200M_050219_2,13194 HBL1_DMSO_200M_050219_2,13194,LPFGWAML False False DGYKPLEL 70.044246 467.747912585735 10051719.0 13185.0 ENSG00000138399|ENST00000453153|FASTKD1;;nc|ENSG00000138399|Q53R41-2|FASTKD1 4.302362442016602 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13195 70.046 88.0 898610.0 25 0 91614.0 + 15208 IPFAGKVEV 9 108 480.2812732382851 958.5479935433702 2 480.2817870974541 MULTI CID FTMS 0 0 0 13185 418710.03125 0.8328010874188353 -1 0.051361083984375 10 Unmodified _IPFAGKVEV_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000473243.5_1_19:19764878-19766320:-|nuORF;ENST00000496082.5_1_19:19764878-19766379:-|nuORF;ENST00000497556.5_1_19:19764878-19766187:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1 22.736283301280096 0.2418982879461534 4 {I|L}P{M(Oxidation (M))|F}A 4 5 50.918 0.0 0.0 5.312 0.0 0.0 0.0 527.2841280572874 527.2841280572874 18.34453751150932 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}P{M(Oxidation (M))|F}A 5.312 + + 766 + 1 1.079 67676.2 1.0 8386 4807 13185 HBL1_DMSO_200M_050219_2,13195 HBL1_DMSO_200M_050219_2,13195,IPFAGKVEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13196 70.055 499.0 391160.0 25 0 82853.0 -1 ISCSNHYNSV 10 150 590.7539615767718 1179.4933702203434 2 590.7553588747978 MULTI CID FTMS 0 0 0 13185 377278.84375 0.3977122554398278 2 -0.2233505249023437 11 Carbamidomethyl (C) _ISC(Carbamidomethyl (C))SNHYNSV_ ENSG00000110422|ENST00000303296|HIPK3;nc|ENSG00000110422|Q9H422-2|HIPK3 18.1463463914782 0.5430639438673815 4 {[TV]|[{I|L}S]}Y[C(Carbamidomethyl (C))M]YNY 8 -1 36.269 0.0 0.0 3.075 0.0 0.0 0.0 82.06701837711171 82.06701837711171 7.503610981609 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.6694451763165201 {[TV]|[{I|L}S]}Y[C(Carbamidomethyl (C))M]YNY 3.075 - 2761 + 1 1.079 145267.5 1.0 8387 4807 13185 HBL1_DMSO_200M_050219_2,13196 HBL1_DMSO_200M_050219_2,13196,ISCSNHYNSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13197 70.066 637.0 223390.0 25 0 47319.0 -1 0 82 1096.781316668537 3287.3221206058124 3 1097.116381824017 MULTI CID FTMS 0 0 0 13185 305814.75 0.5203769190020621 2 -0.2233505249023437 12 4 TTVN 4 -1 28.238 0.0 0.0 0.859 0.0 0.0 2467.9069727560063 401.18357263736567 2869.090545393372 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 1.6989700043360187 TTVN 0.859 - 617 + 1 1.079 125836.2 1.0 8388 4807 13185 HBL1_DMSO_200M_050219_2,13197 HBL1_DMSO_200M_050219_2,13197, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13198 70.078 669.0 388440.0 25 0 26194.0 + 8925 FALPANDP 8 193 422.7136137557298 843.4126745782596 2 422.7135803103447 MULTI CID FTMS 0 0 0 13185 308286.15625 1.0 0 0.0 13 Unmodified _FALPANDP_ REV__ENSG00000153914|ENST00000334121|SREK1;REV__ENST00000520058.1_1_5:65440204-65449453:+|nuORF;REV__ENST00000523851.1_1_5:65440204-65449482:+|nuORF 10.183394434864962 0.7604730176254005 4 EEA{M(Oxidation (M))|F}VH{I|L} 7 -1 + 49.156 0.0 0.0 5.8282 5.8282 78.122 0.0 0.0 0.0 18.99629454882437 3.5654732351381213 3.5654732351381213 3.5654732351381213 0 0.2614393726401688 1.2218487496163564 0.0 0.0 EEA{M(Oxidation (M))|F}VH{I|L};EEA{M(Oxidation (M))|F}V{I|L}H;EEA{M(Oxidation (M))|F}[H{I|L}]V;[HV]{M(Oxidation (M))|F}A{I|L}EE;EEA[RK][DP];[HV]{I|L}[HV][HC];[H{I|L}]V[HV][HC];[HV][HV]{I|L}[HC];EE{I|L}[HV]A{M(Oxidation (M))|F} 5.8282;5.4054;3.3808;1.91;1.8248;1.4851;1.2221;1.197;0.34395 -;-;-;-;-;-;-;-;- 164 + 1 1.079 200342.3 1.0 8389 4807 13185 HBL1_DMSO_200M_050219_2,13198 HBL1_DMSO_200M_050219_2,13198,FALPANDP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13199 70.09 691.0 296050.0 25 0 46442.0 -1 0 113 1073.4184857117127 3217.2336277353384 3 1074.090258777142 MULTI CID FTMS 0 0 0 13185 262627.0 0.3863558753689063 -1 0.051361083984375 14 4 R{M(Oxidation (M))|F}G[YT]EEEAYV 11 -1 23.18 0.0 0.0 0.72049 0.0 0.0 1350.4454940456883 519.1876925104124 1869.6331865561008 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 R{M(Oxidation (M))|F}G[YT]EEEAYV 0.72049 - 396 + 1 1.079 162458.2 1.0 8390 4807 13185 HBL1_DMSO_200M_050219_2,13199 HBL1_DMSO_200M_050219_2,13199, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13200 70.092 100.0 922480.0 25 0 106210.0 32594 SAVPELTDV 9 102 930.4781043085488 929.4708278419488 1 930.4787475466728 MULTI CID FTMS 0 0 0 13185 221244.0625 0.7876254491282099 -2 0.1997833251953125 15 Unmodified _SAVPELTDV_ ENSG00000116127|ENST00000613296|ALMS1;nc|ENSG00000116127|Q8TCU4-2|ALMS1;nc|ENSG00000116127|Q8TCU4-3|ALMS1 25.399314129420983 0.2080152500878129 4 [EP]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VV 7 6 37.452 0.0 0.0 4.0294 0.0 0.0 0.0 113.9977469814162 113.9977469814162 10.390369488289792 0.0 0.0 0.0 0 0.0 0.0 1.1237125054200234 1.0228787452803376 [EP]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VV 4.0294 - 1587 1 1.079 63493.0 1.0 8391 4807 13185 HBL1_DMSO_200M_050219_2,13200 HBL1_DMSO_200M_050219_2,13200,SAVPELTDV False True GQISEVVVV 70.091991 930.478747546673 100691976.0 13185.0 nc|ENSG00000099622|Q14011|CIRBP;;nc|ENSG00000099622|Q14011-2|CIRBP;;ENSG00000099622|ENST00000587896|CIRBP 4.20706844329834 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13201 70.098 216.0 277400.0 25 0 28720.0 + 8666 EVGMLKPTL 9 110 494.2824682458808 986.5503835585616 2 494.2829162478447 MULTI CID FTMS 0 0 0 13185 258152.890625 0.4722346588050187 2 -0.2233505249023437 16 Unmodified _EVGMLKPTL_ REV__ENSG00000143507|ENST00000366899|DUSP10;REV__ENST00000468085.5_1_1:221875756-221910233:-|nuORF;REV__nc|ENSG00000143507|Q9Y6W6-2|DUSP10 16.942295170755138 0.3780752226737986 4 [{I|L}T]E 3 -1 24.437 0.0 0.0 2.477 0.0 0.0 0.0 640.3537642560802 640.3537642560802 7.983324797206279 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T]E 2.477 - 204 1 1.079 50566.0 1.0 8392 4807 13185 HBL1_DMSO_200M_050219_2,13201 HBL1_DMSO_200M_050219_2,13201,EVGMLKPTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13202 70.11 731.0 402740.0 25 0 48347.0 + 30955 RKRYEFWEVFF 11 111 803.9088769977593 1605.8032010623183 2 803.9097167849541 MULTI CID FTMS 0 0 0 13185 233761.75 0.8821825419897193 -1 0.051361083984375 17 Unmodified _RKRYEFWEVFF_ REV__ENSG00000188312|ENST00000375587|CENPP 1.3295316138638542 0.8688751186870782 4 {I|L}PNAV{I|L}TR{I|L} 9 -1 54.505 0.0 0.0 3.3942 0.0 0.0 610.188830034212 0.0 610.188830034212 0.0 19.151151014376342 0.0 0.0 0 0.0 0.0 0.3252574989159953 1.110924374808178 {I|L}PNAV{I|L}TR{I|L} 3.3942 - 903 + 1 1.079 199874.7 1.0 8393 4807 13185 HBL1_DMSO_200M_050219_2,13202 HBL1_DMSO_200M_050219_2,13202,RKRYEFWEVFF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13203 70.123 731.0 105770.0 25 0 10220.0 -1 LEDYWCQCVAW 11 133 736.800386494403 1471.586220055606 2 736.8018676638603 MULTI CID FTMS 0 0 0 13185 226592.296875 0.1025140882490362 4 -0.4497604370117187 18 Carbamidomethyl (C) _LEDYWC(Carbamidomethyl (C))QCVAW_ ENSG00000107731|ENST00000335350|UNC5B;nc|ENSG00000107731|Q8IZJ1-2|UNC5B 5.731851221503515 0.8481046878870278 4 [YE][YE][HC]ENTAT{I|L} 12 -1 [YE][YE][HC]ENT + + 30.445 -3.45 -0.29527 2.0689 2.0689 44.634 0.0 0.0 0.0 0.0 14.44074597573788 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 [YE][YE][HC]ENTAT{I|L} 2.0689 - 356 + 1 1.079 59696.9 1.0 8394 4807 13185 HBL1_DMSO_200M_050219_2,13203 HBL1_DMSO_200M_050219_2,13203,LEDYWCQCVAW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13204 70.135 694.0 157910.0 25 0 7093.8 + 17136 KLHEYFPEM 9 160 597.2868536227504 1192.5591543123007 2 597.2894775271416 MULTI CID FTMS 0 0 0 13185 224532.859375 0.0899416433758911 3 -0.3777313232421875 19 Unmodified _KLHEYFPEM_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 28.49450938151212 0.1686335738423394 4 [EP]G{I|L}T[RN]{M(Oxidation (M))|F}EM 10 7 + 60.155 0.0 0.0 5.0442 5.0442 84.025 0.0 0.0 0.0 13.091170423766556 16.53212513775344 13.091170423766556 13.091170423766556 0 0.3494850021680094 1.5228787452803376 0.3807196863200844 0.0 [EP]G{I|L}T[RN]{M(Oxidation (M))|F}EM;[TP]QC[K{I|L}]{M(Oxidation (M))|F}PEM;[K{I|L}]HEY{M(Oxidation (M))|F}PEM;[EP]G{I|L}V[DN][YR]M;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[NS][K{I|L}]PEM;{[YC]|[HE]}[K{I|L}]Y{M(Oxidation (M))|F}PEM;[EP]G[WK]{[VA]|[{I|L}G]}{M(Oxidation (M))|F}EM;{[YC]|[HE]}Y[K{I|L}]{M(Oxidation (M))|F}PEM;[EP]G{I|L}T[R{M(Oxidation (M))|F}]{[QD]|[EN]|[WG]|[KD]|[RS]}M;[EP]G{I|L}V{M(Oxidation (M))|F}{[SA]|[TG]}{[QD]|[EN]|[WG]|[KD]|[RS]}M 5.0442;3.9465;3.6617;3.6575;3.5942;3.5708;3.5528;3.5361;3.3907;3.3704 -;-;+;-;-;-;-;-;-;- + 2145 1 1.079 83611.1 1.0 8395 4807 13185 HBL1_DMSO_200M_050219_2,13204 HBL1_DMSO_200M_050219_2,13204,KLHEYFPEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13205 70.15 800.0 222590.0 25 0 25461.0 40015 VGEQIAVP 8 144 812.4533301590872 811.4460536924871 1 812.8932983279228 MULTI CID FTMS 0 0 0 13185 49341.5703125 0.6083481068470601 1 -0.1298980712890625 20 Unmodified _VGEQIAVP_ ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF;ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2 42.09456458481378 0.1992492688217789 4 {I|L}[TA]VE 5 6 26.823 0.0 0.0 3.3055 0.0 0.0 0.0 295.14182459049067 295.14182459049067 0.8365866737408822 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.3252574989159953 0.0 {I|L}[TA]VE 3.3055 - 1222 + 1 1.079 123843.3 0.959999978542328 8396 4807 13185 HBL1_DMSO_200M_050219_2,13205 HBL1_DMSO_200M_050219_2,13205,VGEQIAVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13207 70.154 7.0 9470700.0 25 0 2943600.0 -1 0 32 1066.0956183117946 3195.265025535584 3 1066.431079089642 MULTI CID FTMS 0 0 0 13206 19155262.0 1.0 0 0.0 1 4 E 1 -1 6.9897 0.0 0.0 0.21875 0.0 0.0 2539.037144049412 524.1631563775999 3063.200300427012 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21875 - 15 + 1 1.081 69059.4 1.0 8397 4808 13206 HBL1_DMSO_200M_050219_2,13207 HBL1_DMSO_200M_050219_2,13207, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13208 70.159 213.0 694790.0 25 0 51021.0 -1 0 108 1031.451409468261 3091.332399004984 3 1032.121020495892 MULTI CID FTMS 0 0 0 13206 843213.375 0.4813608704261684 1 -0.0934524536132812 2 4 [QT]PH[TA]QATYAS 12 -1 38.589 0.0 0.0 1.2483 0.0 0.0 0.0 1831.752906167347 1831.752906167347 10.641667213824622 0.0 0.0 0.0 0 0.0 0.0 1.2619229975844686 0.8703715150305281 [QT]PH[TA]QATYAS 1.2483 - 26572 1 1.081 101446.1 1.0 8398 4808 13206 HBL1_DMSO_200M_050219_2,13208 HBL1_DMSO_200M_050219_2,13208, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13209 70.16 32.0 2235100.0 25 0 325640.0 + 9113 FFPDKPITQY 10 68 628.3213562907354 1254.6281596482706 2 628.3221313357353 MULTI CID FTMS 0 0 0 13206 1602039.25 0.0667360136281432 -7 0.7205963134765625 3 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 49.55428908609986 0.0827668555218455 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT{I|L}KQY 10 3 + 49.927 0.0 0.0 3.9794 3.9794 73.1 0.0 0.0 0.0 30.463210756148943 8.913198369724391 8.913198369724391 5.471062485323515 0 0.4247425010840047 0.0 0.0 0.75 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT{I|L}KQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT{I|L}K[AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]T[AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]T[AG]Y;[YE]T[{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[Y{I|L}] 3.9794;3.5434;3.1245;2.9897;2.0159;1.8755;0.094305 -;+;-;-;-;-;- + 208 + 1 1.081 58871.6 1.0 8399 4808 13206 HBL1_DMSO_200M_050219_2,13209 HBL1_DMSO_200M_050219_2,13209,FFPDKPITQY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13210 70.161 59.0 820620.0 25 0 93778.0 + 37130 TGYLNTVTV 9 80 484.2583831501523 966.5022133671048 2 484.2587463259697 MULTI CID FTMS 0 0 0 13206 1062594.375 0.0030233360871084 26 -2.6566085815429688 4 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 36.12702656103203 0.0967173616627612 4 TN{I|L}CTV 6 5 42.089 0.0 0.0 4.3547 0.0 0.0 317.19186288057966 0.0 317.19186288057966 0.0 28.27623146104628 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.4247425010840047 TN{I|L}CTV 4.3547 - 168 + 1 1.081 42155.3 1.0 8400 4808 13206 HBL1_DMSO_200M_050219_2,13210 HBL1_DMSO_200M_050219_2,13210,TGYLNTVTV True True TGYLNTVTV 70.161174 484.25874632597 17325131520.0 13206.0 ENSG00000204628|ENST00000512805|RACK1;;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 5.893280982971191 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13211 70.162 41.0 1364500.0 25 0 181150.0 + 2742 ATIGELAQV 9 89 451.2530562139719 900.4915594947438 2 451.2531616091728 MULTI CID FTMS 0 0 0 13206 1012362.4375 0.7549994513857381 -1 0.1298980712890625 5 Unmodified _ATIGELAQV_ ENSG00000198793|ENST00000361445|MTOR 42.09456458481378 0.0639583784996157 4 [{I|L}A]DAT 5 6 40.062 0.0 0.0 4.4489 0.0 0.0 0.0 426.2375061102313 426.2375061102313 16.974446705105844 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 [{I|L}A]DAT 4.4489 - 345 1 1.081 52400.8 1.0 8401 4808 13206 HBL1_DMSO_200M_050219_2,13211 HBL1_DMSO_200M_050219_2,13211,ATIGELAQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13212 70.164 83.0 814350.0 25 0 75252.0 + 10797 FYQPKIQQF 9 83 599.8165997066964 1197.6186464801926 2 599.8170043826103 MULTI CID FTMS 0 0 0 13206 649831.875 0.2405643823364511 -2 0.1812591552734375 6 Unmodified _FYQPKIQQF_ ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI 67.34385681178166 0.0221257235307089 4 [KP]{I|L}QQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F} 9 6 + 29.076 0.0 0.0 2.4278 2.4278 62.089 0.0 0.0 0.0 5.509074688805807 8.876495700231008 5.509074688805807 0.9691001300805624 0 0.242992819099939 0.0 0.0 1.305462187404089 [KP]{I|L}QQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F};[KP]{I|L}QQ[RH][YE];[KP]{I|L}QQ[Y{M(Oxidation (M))|F}]Q{M(Oxidation (M))|F};[KP]{I|L}Q[AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F};[KP]{I|L}[AG]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F};[KP]{I|L}Q[AG][RH][YE];[KP]{I|L}[AG]Q[RH][YE];[KP]{I|L}[AG]Q[Y{M(Oxidation (M))|F}]Q{M(Oxidation (M))|F};[KP]{I|L}Q[AG][Y{M(Oxidation (M))|F}]Q{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]KK{[QV]|[N{I|L}]|[RA]|[KV]}Q[YE] 2.4278;2.3469;2.2039;1.6589;1.6589;1.578;1.578;1.4351;1.4351;1.2201 -;-;-;-;-;-;-;-;-;- 395 1 1.081 54325.2 1.0 8402 4808 13206 HBL1_DMSO_200M_050219_2,13212 HBL1_DMSO_200M_050219_2,13212,FYQPKIQQF True True FYQPKIQQF 70.164237 599.81700438261 49790568.0 13206.0 nc|ENSG00000140525|Q9NVI1-2|FANCI;;nc|ENSG00000140525|Q9NVI1-1|FANCI;;ENSG00000140525|ENST00000310775|FANCI 6.587523937225342 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13213 70.166 85.0 782140.0 25 0 108000.0 + 73 AAFHNFIKV 9 95 349.53111301776323 1045.5715096534898 3 349.5308410525322 MULTI CID FTMS 0 0 0 13206 618914.375 1.0 0 0.0 7 Unmodified _AAFHNFIKV_ ENSG00000104814|ENST00000396857|MAP4K1;nc|ENSG00000104814|Q92918|MAP4K1 20.41453444215458 0.284085796332423 4 {[{M(Oxidation (M))|F}H]|[RQ]}N{M(Oxidation (M))|F}A{I|L} 6 5 35.494 0.0 0.0 3.3947 0.0 0.0 0.0 313.1863527533523 313.1863527533523 20.97373228030179 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.3054621874040891 {[{M(Oxidation (M))|F}H]|[RQ]}N{M(Oxidation (M))|F}A{I|L} 3.3947 - 290 1 1.081 59568.7 1.0 8403 4808 13206 HBL1_DMSO_200M_050219_2,13213 HBL1_DMSO_200M_050219_2,13213,AAFHNFIKV False True AAFHNFIKV 70.166139 349.530841052532 4799377.5 13206.0 nc|ENSG00000104814|Q92918|MAP4K1;;ENSG00000104814|ENST00000396857|MAP4K1 2.366205732027689 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13214 70.168 82.0 899830.0 25 0 124900.0 + 32512 SALNEVHLV 9 108 491.272002608931 980.529452284662 2 491.2721740603447 MULTI CID FTMS 0 0 0 13206 565160.25 0.6771022669156059 -1 0.1298980712890625 8 Unmodified _SALNEVHLV_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 54.773552608820026 0.0299037012502309 4 {[SA]|[TG]}{I|L}NEVH{I|L}V 9 0 + 66.156 0.0 0.0 6.747 6.747 89.984 0.0 0.0 0.0 14.899762753291377 9.63156532247897 9.63156532247897 10.562921620997926 0 0.7742275032520141 1.6989700043360187 0.3494850021680094 0.3807196863200844 + + {[SA]|[TG]}{I|L}NEVH{I|L}V;{[SA]|[TG]}{I|L}NEV[{I|L}V]H;{[SA]|[TG]}{I|L}GGEVH{I|L}V;[H{I|L}]DN{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{I|L}GGEV[{I|L}V]H;[H{I|L}]D{I|L}N{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}N{M(Oxidation (M))|F}TV;[H{I|L}]DGG{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[HV]EN{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]VEN{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.747;5.6697;5.4196;4.5006;4.3423;3.6387;3.3247;3.2243;3.1737;3.1274 +;-;-;-;-;-;-;-;-;- + 451 + 1 1.081 61644.5 1.0 8404 4808 13206 HBL1_DMSO_200M_050219_2,13214 HBL1_DMSO_200M_050219_2,13214,SALNEVHLV True True SALNEVHLV 70.16798 491.272174060345 7320576.0 13206.0 nc|ENSG00000127481|Q5T4S7-2|UBR4;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4 7.951003233591716 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13215 70.172 187.0 345330.0 25 0 30343.0 + 18329 KVLEPSETLVV 11 76 607.355950189554 1212.697347445908 2 607.3563110232353 MULTI CID FTMS 0 0 0 13206 567137.5625 0.936586238391114 -1 0.1298980712890625 9 Unmodified _KVLEPSETLVV_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON 32.037481411007896 0.3399527776090619 4 T{I|L}VRT{I|L}VV 8 6 74.15 0.0 0.0 6.1144 0.0 0.0 313.12800795722814 0.0 313.12800795722814 0.0 35.033284873352315 0.0 0.0 0 0.8494850021680094 0.0 1.6549471895720984 0.0 T{I|L}VRT{I|L}VV 6.1144 - 356 1 1.081 51380.8 1.0 8405 4808 13206 HBL1_DMSO_200M_050219_2,13215 HBL1_DMSO_200M_050219_2,13215,KVLEPSETLVV False True KVLEPSETLVV 70.171606 607.356311023235 13051746.0 13206.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-8|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-9|SON 6.527504603068034 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13216 70.173 69.0 858840.0 25 0 136350.0 + 8997 FAYDGKDYL 9 76 546.2560600961356 1090.497567259071 2 546.2565795779228 MULTI CID FTMS 0 0 0 13206 561708.75 1.0 0 0.0 10 Unmodified _FAYDGKDYL_ ENSG00000204592|ENST00000376630|HLA-E 22.736283301280096 0.2418982879461534 4 [KG]DY[{M(Oxidation (M))|F}V]YAE 9 8 + 48.905 0.0 0.0 4.4846 4.4846 75.474 0.0 0.0 0.0 3.748162098248997 34.21204671777453 3.748162098248997 5.925230508543038 0 0.4247425010840047 0.0 1.055462187404089 0.0 [KG]DY[{M(Oxidation (M))|F}V]YAE;{[YD]|[{M(Oxidation (M))|F}M]}[KG][{M(Oxidation (M))|F}V]YAE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT][{M(Oxidation (M))|F}V]YAE;{[{M(Oxidation (M))|F}C]|[YS]}{[NV]|[RG]}[{M(Oxidation (M))|F}V]YAE 4.4846;3.9413;3.2728;2.3833 -;-;-;- 235 1 1.081 49671.0 1.0 8406 4808 13206 HBL1_DMSO_200M_050219_2,13216 HBL1_DMSO_200M_050219_2,13216,FAYDGKDYL False True FAYDGKDYL 70.173251 546.256579577923 4562914.5 13206.0 ENSG00000204592|ENST00000376630|HLA-E 1.7765651941299438 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13217 70.175 72.0 580180.0 25 0 62776.0 + 33967 SLIEQTTAL 9 86 488.2718354910362 974.5291180488724 2 488.2723266482353 MULTI CID FTMS 0 0 0 13206 525046.75 0.7882684569526922 1 -0.0934524536132812 11 Unmodified _SLIEQTTAL_ ENSG00000111790|ENST00000229395|FGFR1OP2;ENST00000395941.4_1_12:27107091-27110700:+|nuORF;nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 12.531546534597751 0.4974689918368763 4 {[TV]|[{I|L}S]}{I|L} 3 6 24.437 0.0 0.0 2.5076 0.0 0.0 0.0 658.3060400061568 658.3060400061568 7.983324797206279 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + {[TV]|[{I|L}S]}{I|L} 2.5076 + + 92 1 1.081 38739.2 1.0 8407 4808 13206 HBL1_DMSO_200M_050219_2,13217 HBL1_DMSO_200M_050219_2,13217,SLIEQTTAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13218 70.183 480.0 693220.0 25 0 38070.0 + 43090 VYMTEPIDEY 10 162 630.2782843551423 1258.5420157770843 2 630.2786743044853 MULTI CID FTMS 0 0 0 13206 456267.4375 0.4687175120552105 -1 0.1298980712890625 12 Unmodified _VYMTEPIDEY_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 92.8221339359638 0.0091313492244435 4 [YV]MTE[{I|L}P]DEY 10 0 + 35.403 0.0 0.0 2.813 2.813 62.838 0.0 0.0 0.0 2.517799053831098 2.517799053831098 2.517799053831098 1.0921451867560066 0 1.1549471895720984 1.5228787452803376 1.4802046884880935 0.0 + + [YV]MTE[{I|L}P]DEY;[YV]ME{I|L}[TP]DEY;[{I|L}P]DEVYVD[Y{M(Oxidation (M))|F}];[{I|L}P]DEYVVD[Y{M(Oxidation (M))|F}];[{I|L}P]DEVY[MT]EY;[{I|L}P]D[Y{M(Oxidation (M))|F}]TPDEY;[{I|L}P]DEYV[MT]EY;[YV]MET[{I|L}P]DEY;[MT]EYV[{I|L}P]DEY;[MT]YEV[{I|L}P]DEY 2.813;2.7262;2.6129;2.5597;2.431;2.3781;2.3778;2.3356;2.254;2.1344 +;-;-;-;-;-;-;-;-;- + 3537 1 1.081 242293.5 1.0 8408 4808 13206 HBL1_DMSO_200M_050219_2,13218 HBL1_DMSO_200M_050219_2,13218,VYMTEPIDEY True True VYMTEPIDEY 70.183435 630.2785 8126507.5 13206.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 7.049322446187337 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13219 70.185 79.0 560190.0 25 0 94222.0 + 29530 QLMPKFRLT 9 78 567.3295360742105 1132.644519215221 2 567.3300659060478 MULTI CID FTMS 0 0 0 13206 412048.8125 0.3990634861910851 -5 0.5230789184570312 13 Unmodified _QLMPKFRLT_ REV__ENSG00000125037|ENST00000245046|EMC3;REV__ENST00000487465.5_1_3:10011273-10028351:-|nuORF;REV__nc|ENSG00000125037|Q9P0I2-2|EMC3 7.608950283845883 0.6490595679007971 4 {I|L} 1 -1 10.379 0.0 0.0 0.91632 0.0 0.0 1001.5493939484226 0.0 1001.5493939484226 0.0 -19.173990416872225 -19.173990416872225 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.91632 + + 23 + 1 1.081 37199.9 1.0 8409 4808 13206 HBL1_DMSO_200M_050219_2,13219 HBL1_DMSO_200M_050219_2,13219,QLMPKFRLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13220 70.187 58.0 904430.0 25 0 76755.0 + -1 MGYSHSLVI 9 89 503.7547513765283 0 503.7549011111259 PEAK CID FTMS 0 0 0 13206 421050.21875 0.4731562889165192 -1 0.1298980712890625 14 Carbamidomethyl (C) _TVC(Carbamidomethyl (C))GNMLIV_ ENSG00000179051|ENST00000375436|RCC2 30.63653989081413 0.1077493867305487 4 {I|L}M{[{M(Oxidation (M))|F}D]|MM}H 5 -1 11.599 0.0 0.0 1.1535 0.0 0.0 230.16109363099844 129.05611597232658 359.21720960332505 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.7614393726401688 0.0 {I|L}M{[{M(Oxidation (M))|F}D]|MM}H 1.1535 - 90 + 1 1.081 44788.1 1.0 8410 4808 13206 HBL1_DMSO_200M_050219_2,13220 HBL1_DMSO_200M_050219_2,13220,TVCGNMLIV False False MGYSHSLVI 70.186697 503.754901111126 8912181.0 13206.0 ENSG00000179051|ENST00000375436|RCC2 2.1613576809565225 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13221 70.189 112.0 630590.0 25 0 55091.0 + 35628 SVALRLFGSL 10 117 531.8172534110851 1061.61995388897 2 531.8170043826103 MULTI CID FTMS 0 0 0 13206 342006.4375 0.3657446114674952 8 -0.7640457153320312 15 Unmodified _SVALRLFGSL_ REV__ENST00000409863.5_1_7:24870486-24873964:-|nuORF 14.838274106304384 0.5985701837916485 4 {I|L} 1 -1 12.474 0.0 0.0 1.175 0.0 0.0 930.5248438809608 0.0 930.5248438809608 0.0 1.6600064438718911 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.175 + + 63 + 1 1.081 62408.7 1.0 8411 4808 13206 HBL1_DMSO_200M_050219_2,13221 HBL1_DMSO_200M_050219_2,13221,SVALRLFGSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13222 70.192 147.0 480370.0 25 0 89819.0 + 20391 LLGSCITQI 9 99 474.2635225309403 946.5124921286806 2 474.2634155154228 MULTI CID FTMS 0 0 0 13206 354305.0625 0.4030245892105727 8 -0.7640457153320312 16 Unmodified _LLGSCITQI_ REV__ENSG00000187257|ENST00000334955|RSBN1L;REV__nc|ENSG00000187257|Q6PCB5-2|RSBN1L;REV__RSBN1L|p.D286N|1|0.19|ENSG00000187257|chr7:77749576-77749576|G/A|missense_variant 16.942295170755138 0.3780752226737986 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AT{I|L}{[RE]|[WV]}V 8 -1 + 21.119 0.0 0.0 2.2313 2.2313 75.082 0.0 0.0 0.0 4.798640002493709 0.6694678963061307 0.6694678963061307 10.123045056675451 0 0.0 0.0 0.3494850021680094 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AT{I|L}{[RE]|[WV]}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[{I|L}T][DV]Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}TA{[RE]|[WV]}V;[QA][SG][{I|L}P]Y{I|L}V;{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}{[QS]|[NT]}A{I|L}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DV][{I|L}T]Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DV][WR]{I|L} 2.2313;1.1618;0.98405;0.88999;0.78687;0.65769;0.62958 -;-;-;-;-;-;- 179 + 1 1.081 58923.2 1.0 8412 4808 13206 HBL1_DMSO_200M_050219_2,13222 HBL1_DMSO_200M_050219_2,13222,LLGSCITQI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13223 70.203 628.0 114550.0 25 0 21721.0 -1 0 89 649.1526925408493 648.1454160742493 1 649.1533691287041 MULTI CID FTMS 0 0 0 13206 286985.1875 0.5873557349735117 2 -0.247833251953125 17 4 {I|L} 1 -1 13.099 0.0 0.0 2.021 0.0 0.0 517.0504433953415 0.0 517.0504433953415 0.0 1.6722687557546578 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.021 - 91 + 1 1.081 62678.8 1.0 8413 4808 13206 HBL1_DMSO_200M_050219_2,13223 HBL1_DMSO_200M_050219_2,13223, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13224 70.216 755.0 155400.0 25 0 19769.0 -1 0 105 1078.7443058148035 3233.2110880446107 3 1079.413378894329 MULTI CID FTMS 0 0 0 13206 276150.6875 0.9324860979002444 -1 0.1298980712890625 18 4 VEYN{I|L}{I|L} 6 -1 37.74 0.0 0.0 1.1673 0.0 0.0 2172.666362558086 326.1357515924438 2498.8021141505296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 1.1861818737241734 VEYN{I|L}{I|L} 1.1673 - 598 + 1 1.081 95019.5 1.0 8414 4808 13206 HBL1_DMSO_200M_050219_2,13224 HBL1_DMSO_200M_050219_2,13224, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13225 70.228 699.0 132420.0 25 0 8900.3 -1 0 99 809.3106038515193 3233.213309539677 4 809.5622436404228 MULTI CID FTMS 0 0 0 13206 267513.6875 1.0 0 0.0 19 4 DT{M(Oxidation (M))|F}V[HV] 6 -1 11.092 0.0 0.0 0.34308 0.0 0.0 2516.8617476957384 0.0 2516.8617476957384 0.0 7.113037394097439 0.0 0.0 0 0.0 0.0 0.0 0.0 DT{M(Oxidation (M))|F}V[HV] 0.34308 - 96 + 1 1.081 77869.1 1.0 8415 4808 13206 HBL1_DMSO_200M_050219_2,13225 HBL1_DMSO_200M_050219_2,13225, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13226 70.244 800.0 89196.0 25 0 25044.0 -1 0 42 1163.836255113221 3488.486935939862 3 1164.510180652142 MULTI CID FTMS 0 0 0 13206 233111.921875 0.249645440080662 2 -0.247833251953125 20 4 E 1 -1 6.9897 0.0 0.0 0.20036 0.0 0.0 2832.2583725627123 524.1641329400999 3356.4225055028123 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20036 - 1 + 1 1.081 63002.8 0.9399999976158142 8416 4808 13206 HBL1_DMSO_200M_050219_2,13226 HBL1_DMSO_200M_050219_2,13226, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13228 70.248 14.0 5449100.0 25 0 639340.0 + 6084 DSQILPKI 8 90 457.271325564497 912.528098195794 2 457.2713500857353 MULTI CID FTMS 0 0 0 13227 4677573.5 0.6624076166544856 -2 0.2233505249023437 1 Unmodified _DSQILPKI_ ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF 54.773552608820026 0.1167943196628344 4 [AG]SD{I|L}{I|L}PK{I|L} 9 3 [AG]SD + + 33.461 19.87 6.0191 3.6668 3.6668 47.649 0.0 0.0 0.0 0.0 13.590671722280234 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 [AG]SD{I|L}{I|L}PK{I|L} 3.6668 - 123 + 1 1.081 66856.0 1.0 8417 4809 13227 HBL1_DMSO_200M_050219_2,13228 HBL1_DMSO_200M_050219_2,13228,DSQILPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13229 70.249 58.0 763610.0 25 0 103660.0 + 39156 TYNTQVNFM 9 66 559.2529013077852 1116.4912496823704 2 559.2519409060478 MULTI CID FTMS 0 0 0 13227 1070217.125 0.26513031081275 -2 0.2233505249023437 2 Unmodified _TYNTQVNFM_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7684558-7685401:-|nuORF 46.020951573049366 0.0490941689151868 4 [YT]NTQ 5 4 46.374 0.0 0.0 4.1535 0.0 0.0 0.0 506.20783838770166 506.20783838770166 26.688594345109976 0.0 0.0 0.0 0 0.0 2.0 0.9947026752325154 0.3494850021680094 + [YT]NTQ 4.1535 + + 340 1 1.081 40396.3 1.0 8418 4809 13227 HBL1_DMSO_200M_050219_2,13229 HBL1_DMSO_200M_050219_2,13229,TYNTQVNFM True True TYNTQVNFM 70.24934 559.251940906048 65571308.0 13227.0 ENST00000595288.5_1_19:7684558-7685401:-|nuORF;;ENSG00000076924|ENST00000358368|XAB2 7.982412815093994 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13230 70.251 30.0 1542900.0 25 0 152190.0 + 9004 FAYRMGVTV 9 73 522.2698299899638 1042.5251070467275 2 522.2711059451103 MULTI CID FTMS 0 0 0 13227 1203365.125 0.6562580929448234 -1 0.0934524536132812 3 Unmodified _FAYRMGVTV_ ENST00000420697.1_3_7:97880760-97881394:-|nuORF;ENST00000423128.5_3_7:97880760-97881154:-|nuORF;ENST00000447648.6_1_7:97880760-97881562:-|nuORF 32.78568957990786 0.1150597335874693 4 {M(Oxidation (M))|F}V 2 7 39.464 0.0 0.0 3.7854 0.0 0.0 0.0 793.3836648218028 793.3836648218028 12.213403050078782 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {M(Oxidation (M))|F}V 3.7854 - 39 + 1 1.081 44789.3 1.0 8419 4809 13227 HBL1_DMSO_200M_050219_2,13230 HBL1_DMSO_200M_050219_2,13230,FAYRMGVTV True True FAYRMGVTV 70.250517 522.27110594511 14667861.0 13227.0 ENST00000420697.1_3_7:97880760-97881394:-|nuORF;;ENST00000423128.5_3_7:97880760-97881154:-|nuORF;;ENST00000447648.6_1_7:97880760-97881562:-|nuORF 7.159337997436523 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13231 70.252 30.0 1297200.0 25 0 101800.0 + 45250 YSCVIISDQP 10 76 562.7698226477454 1123.5250923622907 2 562.7705566287041 MULTI CID FTMS 0 0 0 13227 1177926.5 0.7318797396228176 -1 0.0934524536132812 4 Unmodified _YSCVIISDQP_ REV__ENSG00000188133|ENST00000342743|TMEM215 11.494710602746466 0.654671931888957 4 V{I|L}D[NP]T{I|L} 7 -1 30.489 0.0 0.0 2.7137 0.0 0.0 353.1028654310431 0.0 353.1028654310431 0.0 18.89538840213945 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.0 V{I|L}D[NP]T{I|L} 2.7137 - 46 + 1 1.081 37959.1 1.0 8420 4809 13227 HBL1_DMSO_200M_050219_2,13231 HBL1_DMSO_200M_050219_2,13231,YSCVIISDQP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13232 70.254 94.0 564100.0 25 0 50719.0 + 18082 KTIDDLEETL 10 87 588.8034842481705 1175.592415563141 2 588.8036987185478 MULTI CID FTMS 0 0 0 13227 550846.25 0.1611252931357335 -2 0.2233505249023437 5 Unmodified _KTIDDLEETL_ nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2 57.24910588100465 0.0438022649904578 4 [{I|L}T]KDD{I|L}EET{I|L} 10 2 + 100.58 0.0 0.0 8.556 8.556 91.512 0.0 0.0 0.0 13.750612633917 16.53212513775344 13.750612633917 8.979400086720375 0 0.9247425010840048 1.5228787452803376 1.9731975075880328 0.0 [{I|L}T]KDD{I|L}EET{I|L};[{I|L}T]E[QT]{I|L}EET{I|L};[{I|L}T]Q{[ET]|[MV]}{I|L}EET{I|L};{[QN]|[E{I|L}]|[KN]}T[QT]{I|L}EET{I|L};[{I|L}T]DDK{I|L}EET{I|L};{[QN]|[E{I|L}]|[KN]}[KS]D{I|L}EET{I|L};{NN|[MP]|[D{I|L}]|[EV]}DTK{I|L}EET{I|L};EE[VS]K{I|L}EET{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KT]D{I|L}EET{I|L};{[QN]|[E{I|L}]|[KN]}T[WR]EET{I|L} 8.556;7.7922;7.3863;7.3863;7.3668;7.217;7.1067;6.8786;6.6184;6.5974 -;-;-;-;-;-;-;-;-;- 1421 1 1.081 45808.7 1.0 8421 4809 13227 HBL1_DMSO_200M_050219_2,13232 HBL1_DMSO_200M_050219_2,13232,KTIDDLEETL True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13233 70.255 58.0 761960.0 25 0 61400.0 + -1 EVIEKFDYV 9 79 571.2863573968497 570.2790809302496 1 571.2906982302666 MULTI CID FTMS 0 0 0 13227 549791.875 0.0664050294400383 -5 0.5052108764648438 6 ENST00000482178.5_1_22:41980283-41980722:-|nuORF;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;ENST00000472620.5_1_22:41980283-41985061:-|nuORF;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;ENSG00000100417|ENST00000216259|PMM1 4 V 1 -1 14.604 0.0 0.0 2.5609 0.0 0.0 453.19942807556055 0.0 453.19942807556055 0.0 -0.0886438348021556 -0.0886438348021556 0.0 0 0.0 0.0 0.0 0.0 V 2.5609 - 25 + 1 1.081 39534.3 1.0 8422 4809 13227 HBL1_DMSO_200M_050219_2,13233 HBL1_DMSO_200M_050219_2,13233, False False EVIEKFDYV 70.255222 571.290698230267 13624439.0 13227.0 ENST00000482178.5_1_22:41980283-41980722:-|nuORF;;ENST00000485648.5_1_22:41980283-41985809:-|nuORF;;ENST00000472620.5_1_22:41980283-41985061:-|nuORF;;ENST00000478337.1_1_22:41980122-41985809:-|nuORF;;ENSG00000100417|ENST00000216259|PMM1 3.24612561861674 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13234 70.265 584.0 329610.0 25 0 42541.0 -1 0 85 1052.4203073876463 3154.2390927631395 3 1052.756884753704 MULTI CID FTMS 0 0 0 13227 407266.9375 0.2237829406740243 -2 0.2233505249023437 7 4 YG[WY]T{I|L}ET{M(Oxidation (M))|F}K 10 -1 49.162 0.0 0.0 1.5586 0.0 0.0 1449.492096768802 413.1507662408813 1862.6428630096832 0.0 0.0 0.0 0.0 0 0.0 0.0 1.048455006504028 0.3807196863200844 YG[WY]T{I|L}ET{M(Oxidation (M))|F}K 1.5586 - 1057 + 1 1.081 167595.3 1.0 8423 4809 13227 HBL1_DMSO_200M_050219_2,13234 HBL1_DMSO_200M_050219_2,13234, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13235 70.275 560.0 298270.0 25 0 34713.0 + 13105 HEQHHQYPL 9 149 594.781294404275 1187.5480358753498 2 594.7830688357353 MULTI CID FTMS 0 0 0 13227 313864.75 0.1620517728113551 6 -0.6026458740234375 8 Unmodified _HEQHHQYPL_ ENSG00000113448|ENST00000340635|PDE4D 32.30548876998284 0.1201446275138228 4 {[QD]|[EN]|[WG]|[KD]|[RS]}YK{M(Oxidation (M))|F}DYP{I|L} 9 5 + 64.237 0.0 0.0 5.4092 5.4092 78.994 0.0 0.0 0.0 0.7378621416091846 40.2875625471049 0.7378621416091846 5.713337517843655 0 1.0 0.0 1.9957416651753048 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}YK{M(Oxidation (M))|F}DYP{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}YKMMYP{I|L};KKDY{M(Oxidation (M))|F}DYP{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}KY{M(Oxidation (M))|F}DYP{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[VG]K{M(Oxidation (M))|F}DYP{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}YK{M(Oxidation (M))|F}DPY{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[RK]{M(Oxidation (M))|F}DYP{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}KYMMYP{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[VG]KMMYP{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}YKMMPY{I|L} 5.4092;4.9281;4.9262;4.8592;4.7008;4.6939;4.4043;4.3781;4.2197;4.2128 -;-;-;-;-;-;-;-;-;- 3239 1 1.081 127465.9 1.0 8424 4809 13227 HBL1_DMSO_200M_050219_2,13235 HBL1_DMSO_200M_050219_2,13235,HEQHHQYPL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13236 70.286 605.0 437440.0 25 0 18691.0 -1 0 137 754.3644442705836 3013.428671215934 4 754.6166869997978 MULTI CID FTMS 0 0 0 13227 312816.28125 1.0 0 0.0 9 4 [MN]PN{I|L}DY{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]W 12 -1 71.749 0.0 0.0 2.381 0.0 0.0 0.0 1538.770245427061 1538.770245427061 47.54100322985387 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 2.079689690656103 [MN]PN{I|L}DY{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]W 2.381 - 1808 + 1 1.081 195248.0 1.0 8425 4809 13227 HBL1_DMSO_200M_050219_2,13236 HBL1_DMSO_200M_050219_2,13236, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13237 70.288 102.0 475130.0 25 0 39858.0 42436 VTFQEPPGV 9 87 487.2544919752623 972.4944310173246 2 487.2551757693291 MULTI CID FTMS 0 0 0 13227 285049.3125 0.6108360034369653 2 -0.226409912109375 10 Unmodified _VTFQEPPGV_ ENSG00000106991|ENST00000373203|ENG;nc|ENSG00000106991|P17813-2|ENG 13.50788311687929 0.4710407108020397 4 [EP]G{I|L}Q 5 7 18.481 0.0 0.0 1.9004 0.0 0.0 0.0 445.2106123168263 445.2106123168263 3.788624837399297 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 [EP]G{I|L}Q 1.9004 - 127 1 1.081 41871.2 1.0 8426 4809 13227 HBL1_DMSO_200M_050219_2,13237 HBL1_DMSO_200M_050219_2,13237,VTFQEPPGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13238 70.301 761.0 382370.0 25 0 37115.0 + 36530 TAHLVSMI 8 233 436.23878227088574 870.4630116085715 2 436.2391540408134 MULTI CID FTMS 0 0 0 13227 256526.609375 1.0 0 0.0 11 Unmodified _TAHLVSMI_ ENSG00000198382|ENST00000356136|UVRAG 30.22481116460888 0.4082965392918993 4 [TA]H{I|L}VSM{I|L} 8 0 + 27.044 0.0 0.0 3.1069 3.1069 66.656 0.0 0.0 0.0 2.940235669086217 3.743386359758418 2.940235669086217 2.940235669086217 0 0.6069758080123702 0.2924298239020636 0.6989700043360187 0.0 + + [TA]H{I|L}VSM{I|L};[{I|L}A][HT]VSM{I|L};[HA]T{I|L}VSM{I|L};VV[HS]VSM{I|L};[H{I|L}][TA]VSM{I|L};[YV]SV{I|L}HGP;[VS][HV]VSM{I|L};[YV]SV[HA]PV;VVQVC{I|L}[NP];[H{I|L}]V[TA]SM{I|L} 3.1069;2.7691;2.6898;2.6836;2.3378;1.6704;1.543;1.2163;1.2037;1.1414 +;-;-;-;-;-;-;-;-;- + 1230 1 1.081 224874.0 1.0 8427 4809 13227 HBL1_DMSO_200M_050219_2,13238 HBL1_DMSO_200M_050219_2,13238,TAHLVSMI False True TAHLVSMI 70.30123 436.239154040813 2189395.0 13227.0 ENSG00000198382|ENST00000356136|UVRAG 1.2048338254292803 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13239 70.314 707.0 215920.0 25 0 28930.0 -1 0 91 805.8138464391138 3219.226279890055 4 805.8153564333916 MULTI CID FTMS 0 0 0 13227 220908.21875 1.0 0 0.0 12 4 AV 2 -1 9.464 0.0 0.0 0.29398 0.0 0.0 2350.747904375733 695.3497836282536 3046.0976880039866 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AV 0.29398 - 54 + 1 1.081 125504.8 1.0 8428 4809 13227 HBL1_DMSO_200M_050219_2,13239 HBL1_DMSO_200M_050219_2,13239, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13240 70.329 800.0 63113.0 25 0 16958.0 -1 0 50 1083.7320118846287 3248.174206254086 3 1084.401293933392 MULTI CID FTMS 0 0 0 13227 209170.90625 1.0 0 0.0 13 4 K 1 -1 4.6041 0.0 0.0 0.14174 0.0 0.0 2240.5515999081867 876.4972017877561 3117.048801695943 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.14174 - 12 + 1 1.081 48693.6 1.0 8429 4809 13227 HBL1_DMSO_200M_050219_2,13240 HBL1_DMSO_200M_050219_2,13240, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13241 70.333 210.0 693110.0 25 0 90759.0 14420 IFLSLWAV 8 135 474.78077746274255 0 474.7809936404228 PEAK CID FTMS 0 0 0 13227 180275.421875 0.7851364870328184 -1 0.0934524536132812 14 Unmodified _IFLSLWAV_ ENSG00000135318|ENST00000257770|NT5E;nc|ENSG00000135318|P21589-2|NT5E 34.18733598223924 0.1926487934498573 4 {M(Oxidation (M))|F}AT 3 6 19.715 0.0 0.0 2.0806 0.0 0.0 113.08742424872884 512.2843111627561 625.371735411485 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 {M(Oxidation (M))|F}AT 2.0806 - 275 + 1 1.081 114801.9 1.0 8430 4809 13227 HBL1_DMSO_200M_050219_2,13241 HBL1_DMSO_200M_050219_2,13241,IFLSLWAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13242 70.337 220.0 636940.0 25 0 80706.0 + + 22477 LPIYVTRV 8 134 480.7984462818823 959.5823396305644 2 480.8006469607353 MULTI CID FTMS 0 0 0 13227 155942.78125 0.4038895267627238 -1 0.0934524536132812 15 Unmodified _LPVLYRLS_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 22.736283301280096 0.5659792798204337 4 {I|L}P{I|L}YV 5 -1 59.578 0.0 0.0 6.2088 0.0 0.0 0.0 371.2059115045532 371.2059115045532 45.59894379144197 0.0 0.0 0.0 0 0.5114393726401688 2.0 0.0 0.0 {I|L}P{I|L}YV 6.2088 - 920 + 1 1.081 108906.8 1.0 8431 4809 13227 HBL1_DMSO_200M_050219_2,13242 HBL1_DMSO_200M_050219_2,13242,LPVLYRLS False False LPIYVTRV 70.336673 480.800646960735 2519547.75 13227.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 3.0592735608418784 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13243 70.342 300.0 313910.0 25 0 25550.0 + 42080 VQVWPVRQV 9 123 555.8245613646169 1109.6345697960337 2 555.8246337771416 MULTI CID FTMS 0 0 0 13227 166940.734375 1.0 0 0.0 16 Unmodified _VQVWPVRQV_ ENSG00000114573|ENST00000273398|ATP6V1A;nc|ENSG00000114573|P38606-2|ATP6V1A 46.020951573049366 0.0490941689151868 4 {[QV]|[N{I|L}]|[RA]|[KV]}VWVP[RN]{I|L} 9 4 + 69.671 0.0 0.0 6.2787 6.2787 80.241 0.0 0.0 0.0 17.9390028798052 10.316328478690693 10.316328478690693 3.881801713828807 0 1.325257498915995 1.3979400086720375 0.0 1.055462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}VWVP[RN]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VWVP{[NV]|[RG]}G{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V{[DA]|[EG]}VP[RN]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VWVP{[NV]|[RG]}AV;{[QV]|[N{I|L}]|[RA]|[KV]}V{[DA]|[EG]}VP{[NV]|[RG]}G{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V{[DA]|[EG]}VP{[NV]|[RG]}AV 6.2787;5.9289;5.4489;5.349;5.103;4.5231 -;-;-;-;-;- 990 + 1 1.081 79556.0 1.0 8432 4809 13227 HBL1_DMSO_200M_050219_2,13243 HBL1_DMSO_200M_050219_2,13243,VQVWPVRQV True True VQVWPVRQV 70.34219 555.824633777142 2250152.5 13227.0 nc|ENSG00000114573|P38606-2|ATP6V1A;;ENSG00000114573|ENST00000273398|ATP6V1A 7.012072404225667 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13244 70.356 800.0 86448.0 25 0 19353.0 -1 0 58 1158.4549743347477 3472.343093604444 3 1158.789843738079 MULTI CID FTMS 0 0 0 13227 149830.8125 1.0 0 0.0 17 4 Y[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]YG 5 -1 12.218 0.0 0.0 0.35188 0.0 0.0 1311.4704872585432 1467.6282305049522 2779.098717763495 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]YG 0.35188 - 12 + 1 1.081 63149.6 0.8100000023841858 8433 4809 13227 HBL1_DMSO_200M_050219_2,13244 HBL1_DMSO_200M_050219_2,13244, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13245 70.37 754.0 70625.0 25 0 5810.7 14339 IERILLLVRN 10 98 619.8983032107353 0 619.8983032107353 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _IERILLLVRN_ ENSG00000111602|ENST00000553532|TIMELESS;nc|ENSG00000111602|Q9UNS1-2|TIMELESS 3.5964929083625545 0.3961065659209837 4 P 1 10 4.6041 0.0 0.0 0.37196 0.0 0.0 618.5064930408081 519.1972750299436 1137.7037680707515 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.37196 - 17 + 1 1.081 46309.9 1.0 8434 4809 13227 HBL1_DMSO_200M_050219_2,13245 HBL1_DMSO_200M_050219_2,13245,IERILLLVRN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13246 70.384 800.0 167390.0 25 0 26212.0 -1 0 98 987.133137230533 2958.3775822917987 3 987.4737426638604 MULTI CID FTMS 0 0 0 13227 144135.0 0.5860451766027913 -2 0.2233505249023437 19 4 [NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}DAVV 9 -1 21.849 0.0 0.0 0.73856 0.0 0.0 0.0 1968.9064442196884 1968.9064442196884 4.784540125111629 0.0 0.0 0.0 0 0.5 0.0 0.6549471895720985 0.2887254899964357 [NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}DAVV 0.73856 - 212 1 1.081 97797.4 0.9300000071525574 8435 4809 13227 HBL1_DMSO_200M_050219_2,13246 HBL1_DMSO_200M_050219_2,13246, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13247 70.398 800.0 212870.0 25 0 72324.0 -1 0 96 721.6692984623537 0 721.6691161990166 PEAK CID FTMS 0 0 0 13227 134073.359375 1.0 0 0.0 20 4 VA{I|L}HT 5 -1 16.956 0.0 0.0 1.1764 0.0 0.0 737.8835055167011 179.11960779361564 917.0031133103168 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 VA{I|L}HT 1.1764 - 174 + 1 1.081 128830.5 0.9900000095367432 8436 4809 13227 HBL1_DMSO_200M_050219_2,13247 HBL1_DMSO_200M_050219_2,13247, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13249 70.402 1.4 41814000.0 25 0 3937100.0 + 21779 LPNAVITRI 9 82 498.8138193580857 995.6130857829714 2 498.8144409060478 MULTI CID FTMS 0 0 0 13248 42790872.0 0.8599562373792589 -1 0.1543807983398437 1 Unmodified _LPNAVITRI_ ENSG00000148229|ENST00000374171|POLE3;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 38.61474834105838 0.0830609365873449 4 {I|L}PNAV{I|L} 6 3 79.558 0.0 0.0 7.9908 0.0 0.0 0.0 385.2202852838501 385.2202852838501 49.63615337528019 0.0 0.0 0.0 0 1.4916440611282624 1.6989700043360187 0.0 0.3494850021680094 + {I|L}PNAV{I|L} 7.9908 + + 151 + 1 1.081 51201.2 1.0 8437 4810 13248 HBL1_DMSO_200M_050219_2,13249 HBL1_DMSO_200M_050219_2,13249,LPNAVITRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13250 70.403 2.9 17813000.0 25 0 4112300.0 + 12405 GTIGLIHAV 9 65 440.7661659458888 879.5177789585775 2 440.7664367556572 MULTI CID FTMS 0 0 0 13248 20747952.0 1.0 0 0.0 2 Unmodified _GTIGLIHAV_ ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF 40.44857923139169 0.0729940656229577 4 {[SA]|[TG]}{I|L}G{I|L}KG{I|L} 8 4 45.403 0.0 0.0 5.1623 0.0 0.0 0.0 137.0358065240844 137.0358065240844 4.4688797166689085 0.0 0.0 0.0 0 0.8494850021680094 1.3979400086720375 0.0 0.0 {[SA]|[TG]}{I|L}G{I|L}KG{I|L} 5.1623 - 122 + 1 1.081 43792.4 1.0 8438 4810 13248 HBL1_DMSO_200M_050219_2,13250 HBL1_DMSO_200M_050219_2,13250,GTIGLIHAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13251 70.405 13.0 3483800.0 25 0 289580.0 + 42992 VVVDPIQSV 9 68 478.2756335834885 954.536714233777 2 478.2768737673759 MULTI CID FTMS 0 0 0 13248 4368176.5 1.0 0 0.0 3 Unmodified _VVVDPIQSV_ ENSG00000115233|ENST00000409682|PSMD14 71.13359017698441 0.0206607516130725 4 VVDVP{I|L} 6 5 40.921 0.0 0.0 4.287 0.0 0.0 0.0 329.1438058687958 329.1438058687958 14.247673207481828 0.0 0.0 0.0 0 0.6307196863200843 2.0 0.0 0.0 VVDVP{I|L} 4.287 - 261 1 1.081 40889.9 1.0 8439 4810 13248 HBL1_DMSO_200M_050219_2,13251 HBL1_DMSO_200M_050219_2,13251,VVVDPIQSV True True VVVDPIQSV 70.404614 478.276873767376 40162936.0 13248.0 ENSG00000115233|ENST00000409682|PSMD14 6.760594209035237 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13252 70.406 19.0 2809400.0 25 0 416450.0 + 17732 KPVSPVIF 8 78 443.773538906193 885.532524879186 2 443.7733642458916 MULTI CID FTMS 0 0 0 13248 2944290.0 0.1718188773232508 34 -3.443397521972656 4 Unmodified _KPVSPVIF_ REV__ENSG00000134121|ENST00000256509|CHL1;REV__nc|ENSG00000134121|O00533|CHL1 21.74664581756881 0.5868176546531598 4 {I|L}PP[KS]VV{M(Oxidation (M))|F} 8 -1 + 50.182 0.0 0.0 5.6669 5.6669 89.501 0.0 0.0 0.0 14.06295947543775 1.6824376479242176 1.6824376479242176 50.18237211568909 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PP[KS]VV{M(Oxidation (M))|F} 5.6669 - 152 + 1 1.081 47792.3 1.0 8440 4810 13248 HBL1_DMSO_200M_050219_2,13252 HBL1_DMSO_200M_050219_2,13252,KPVSPVIF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13253 70.407 34.0 1581400.0 25 0 213570.0 + 25630 NFPEKISSL 9 79 517.7787940831879 1033.5430352331755 2 517.7791625857353 MULTI CID FTMS 0 0 0 13248 1181052.625 0.4836249473426126 5 -0.4482650756835937 5 Unmodified _NFPEKISSL_ ENST00000420672.1_1_2:179278757-179278808:+|nuORF 22.736283301280096 0.2418982879461534 4 [EP]K{I|L}SS 6 3 34.882 0.0 0.0 3.375 0.0 0.0 0.0 389.1820482549133 389.1820482549133 8.44212497064703 0.0 0.0 0.0 0 0.0 1.0 0.4247425010840047 0.0 + [EP]K{I|L}SS 3.375 + + 87 1 1.081 44856.7 1.0 8441 4810 13248 HBL1_DMSO_200M_050219_2,13253 HBL1_DMSO_200M_050219_2,13253,NFPEKISSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13254 70.408 42.0 1437000.0 25 0 148120.0 + 2219 AQCPIVERL 9 79 514.7818559110956 0 514.7817260622978 PEAK CID FTMS 0 0 0 13248 1098747.875 0.9079924042518092 -1 0.1543807983398437 6 Unmodified _AQCPIVERL_ ENSG00000083845|ENST00000196551|RPS5;ENST00000598807.1_1_19:58899504-58905010:+|nuORF 28.49450938151212 0.124065572374239 4 C{I|L}PVE 5 6 35.433 0.0 0.0 3.4483 0.0 0.0 199.0958922930213 284.1733797662719 483.26927205929326 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.0 C{I|L}PVE 3.4483 - 49 + 1 1.081 50075.4 1.0 8442 4810 13248 HBL1_DMSO_200M_050219_2,13254 HBL1_DMSO_200M_050219_2,13254,AQCPIVERL True True AQCPIVERL 70.408165 514.781726062298 35216728.0 13248.0 ENSG00000083845|ENST00000196551|RPS5;;ENST00000598807.1_1_19:58899504-58905010:+|nuORF 6.297210693359375 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13255 70.41 61.0 797070.0 25 0 83202.0 + + 39744 KIIQDIETI 9 93 536.8149450287486 1071.6153371242972 2 536.8163329958916 MULTI CID FTMS 0 0 0 13248 960649.3125 0.9726887061675448 -1 0.1543807983398437 7 Unmodified _VEKQLEITL_ nc|ENSG00000072803|Q9UKB1-2|FBXW11;ENSG00000166167|ENST00000370187|BTRC;ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000166167|Q9Y297-2|BTRC 32.78568957990786 0.1150597335874693 4 {[QN]|[E{I|L}]|[KN]}N{I|L}K{I|L}ET{I|L} 9 -1 + 76.309 0.0 0.0 7.1209 7.1209 85.955 0.0 0.0 0.0 6.89210167046862 14.973024840566469 6.89210167046862 6.020599913279625 0 0.9247425010840048 1.6989700043360187 0.5 0.0 {[QN]|[E{I|L}]|[KN]}N{I|L}K{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}N{I|L}KE{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}K{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}GG{I|L}K{I|L}ET{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}KE{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}GG{I|L}KE{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]{I|L}K{I|L}ET{I|L};[Q{I|L}]D{I|L}K{I|L}ET{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]{I|L}KE{I|L}T{I|L};[Q{I|L}]D{I|L}KE{I|L}T{I|L} 7.1209;6.5591;6.4778;6.2616;5.916;5.6998;5.6185;5.3285;5.0567;4.7667 -;-;-;-;-;-;-;-;-;- 276 1 1.081 41778.5 1.0 8443 4810 13248 HBL1_DMSO_200M_050219_2,13255 HBL1_DMSO_200M_050219_2,13255,VEKQLEITL False False KIIQDIETI 70.409685 536.816332995892 7463948.0 13248.0 nc|ENSG00000072803|Q9UKB1-2|FBXW11;;ENSG00000166167|ENST00000370187|BTRC;;ENSG00000072803|ENST00000517395|FBXW11;;nc|ENSG00000072803|Q9UKB1|FBXW11;;nc|ENSG00000072803|Q9UKB1-3|FBXW11;;nc|ENSG00000166167|Q9Y297-2|BTRC 3.0527453422546387 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13256 70.411 44.0 1251600.0 25 0 180430.0 38096 TPKSHGRI 8 88 448.25976989542585 894.5049868576517 2 448.2591735720634 MULTI CID FTMS 0 0 0 13248 846727.25 0.9165322353954533 -1 0.1543807983398437 8 Unmodified _TPKSHGRI_ ENSG00000163154|ENST00000368910|TNFAIP8L2 2.302733041254933 0.8103549651115762 4 W 1 8 5.4846 0.0 0.0 0.61314 0.0 0.0 446.36706068753296 259.02561365299067 705.3926743405236 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.61314 - 11 + 1 1.081 47847.4 1.0 8444 4810 13248 HBL1_DMSO_200M_050219_2,13256 HBL1_DMSO_200M_050219_2,13256,TPKSHGRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13257 70.412 49.0 997120.0 25 0 55967.0 + -1 RQIDQMVGL 9 88 530.2853692667982 0 530.2854492068291 PEAK CID FTMS 0 0 0 13248 602321.0 1.0 0 0.0 9 Carbamidomethyl (C) _VHIYVC(Carbamidomethyl (C))VGI_ ENSG00000134109|ENST00000256497|EDEM1 20.871210003555333 0.1931737080476581 4 GVMQ 4 -1 26.938 0.0 0.0 2.5448 0.0 0.0 131.09835026063973 509.2479952447875 640.3463455054273 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 GVMQ 2.5448 - 62 + 1 1.081 45061.4 1.0 8445 4810 13248 HBL1_DMSO_200M_050219_2,13257 HBL1_DMSO_200M_050219_2,13257,VHIYVCVGI False False RQIDQMVGL 70.412215 530.285449206829 4554531.0 13248.0 ENSG00000134109|ENST00000256497|EDEM1 4.121469418207805 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13258 70.414 98.0 541510.0 25 0 47413.0 37403 TLANLLETL 9 95 494.2894523864257 986.5643518396514 2 494.2902099490166 MULTI CID FTMS 0 0 0 13248 525774.9375 1.0 0 0.0 10 Unmodified _TLANLLETL_ ENSG00000109163|ENST00000226413|GNRHR;nc|ENSG00000109163|P30968-2|GNRHR 22.736283301280096 0.2418982879461534 4 {NN|[MP]|[D{I|L}]|[EV]}GVK{I|L}ET{I|L} 9 4 + 48.448 0.0 0.0 4.9108 4.9108 71.812 0.0 0.0 0.0 2.382391658045257 10.330145895351848 2.382391658045257 2.382391658045257 0 0.8182503180159344 0.8860566476931632 0.7302046884880937 0.0 {NN|[MP]|[D{I|L}]|[EV]}GVK{I|L}ET{I|L};[{I|L}T][Q{I|L}]G{I|L}ET{I|L};[PS]TVK{I|L}ET{I|L};[{I|L}T][VG]AA{I|L}ET{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RK]{I|L}ET{I|L};{[TV]|[{I|L}S]}[RV]G{I|L}ET{I|L};{[TV]|[{I|L}S]}[PS]K{I|L}ET{I|L};[{I|L}T][VG][RV]ET{I|L};[K{I|L}][DV]G{I|L}ET{I|L};[K{I|L}][RD]{I|L}ET{I|L} 4.9108;4.6693;3.7539;3.5111;3.4474;3.1084;2.8033;2.7998;2.3017;2.1287 -;-;-;-;-;-;-;-;-;- 307 1 1.081 44468.4 1.0 8446 4810 13248 HBL1_DMSO_200M_050219_2,13258 HBL1_DMSO_200M_050219_2,13258,TLANLLETL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13259 70.417 138.0 579910.0 25 0 82391.0 + + 29753 VPQQALVI 8 109 434.26864017504926 866.5227274168985 2 434.2687866091728 MULTI CID FTMS 0 0 0 13248 476958.625 0.57208974881717 -2 0.247833251953125 11 Unmodified _QPQAVLLV_ ENSG00000105409|ENST00000648268|ATP1A3;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000163399|ENST00000295598|ATP1A1;ENSG00000132681|ENST00000368081|ATP1A4;nc|ENSG00000163399|P05023-2|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;nc|ENSG00000105409|P13637-3|ATP1A3;ENSG00000018625|ENST00000361216|ATP1A2;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000105409|P13637-2|ATP1A3 30.22481116460888 0.4082965392918993 4 [QP]QAV{I|L}V{I|L} 8 -1 + 44.302 0.0 0.0 5.1126 5.1126 77.822 0.0 0.0 0.0 4.6040937697618745 28.817365755370403 4.6040937697618745 5.752574989159953 0 0.7429928190999391 0.0 0.0 0.6237125054200234 [QP]QAV{I|L}V{I|L};[QP]QVA{I|L}V{I|L};[QP]QA{I|L}VV{I|L};[QP][AG]AV{I|L}V{I|L};[QP]VQA{I|L}V{I|L};[QP][AG]VA{I|L}V{I|L};[QP][AG]A{I|L}VV{I|L};[QP]V[AG]A{I|L}V{I|L};[{I|L}V]AQ[QP]V{I|L};[QP]V{[NV]|[RG]}VV{I|L} 5.1126;4.4487;4.3619;4.0437;3.4065;3.3799;3.293;2.3377;1.6783;1.1867 -;-;-;-;-;-;-;-;-;- 136 1 1.081 64834.9 1.0 8447 4810 13248 HBL1_DMSO_200M_050219_2,13259 HBL1_DMSO_200M_050219_2,13259,QPQAVLLV False False VPQQALVI 70.417112 434.268786609173 9647675.0 13248.0 ENSG00000105409|ENST00000648268|ATP1A3;;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;;ENSG00000163399|ENST00000295598|ATP1A1;;ENSG00000132681|ENST00000368081|ATP1A4;;nc|ENSG00000163399|P05023-2|ATP1A1;;nc|ENSG00000163399|P05023-4|ATP1A1;;nc|ENSG00000105409|P13637-3|ATP1A3;;ENSG00000018625|ENST00000361216|ATP1A2;;nc|ENSG00000163399|P05023-3|ATP1A1;;nc|ENSG00000105409|P13637-2|ATP1A3 2.042057991027832 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13260 70.419 113.0 512960.0 25 0 51719.0 + 25323 NAIEKVFKV 9 100 349.8783145318914 1046.6131141958742 3 349.8780395388603 MULTI CID FTMS 0 0 0 13248 340081.3125 0.931069265599638 1 -0.0720291137695312 12 Unmodified _NAIEKVFKV_ ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-2|GLUD1;nc|ENSG00000148672|P00367-3|GLUD1 30.63653989081413 0.1413794767160703 4 EKV{M(Oxidation (M))|F}KV 6 3 39.078 0.0 0.0 3.7337 0.0 0.0 298.1630767422634 0.0 298.1630767422634 0.0 31.1971870903786 0.0 0.0 0 0.0 0.0 0.5 0.2887254899964357 + EKV{M(Oxidation (M))|F}KV 3.7337 + + 102 + 1 1.081 58481.8 1.0 8448 4810 13248 HBL1_DMSO_200M_050219_2,13260 HBL1_DMSO_200M_050219_2,13260,NAIEKVFKV False True NAIEKVFKV 70.419475 349.87803953886 3341564.5 13248.0 ENSG00000182890|ENST00000328078|GLUD2;;ENSG00000148672|ENST00000277865|GLUD1;;nc|ENSG00000148672|P00367-3|GLUD1;;nc|ENSG00000148672|P00367-2|GLUD1 5.315962473551433 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13261 70.423 182.0 762000.0 25 0 64485.0 + 41432 VPLGVISRV 9 135 470.3022382406521 938.5899235481044 2 470.3020812869072 MULTI CID FTMS 0 0 0 13248 341272.59375 0.8837941815231912 -1 0.1543807983398437 13 Unmodified _VPLGVISRV_ ENSG00000063601|ENST00000445323|MTMR1;nc|ENSG00000063601|Q13613-2|MTMR1;nc|ENSG00000063601|Q13613|MTMR1 36.506200033944 0.094635877243972 4 VP{I|L}GV[DV]K{I|L} 9 4 + 66.252 0.0 0.0 7.0587 7.0587 85.692 0.0 0.0 0.0 52.75752837077448 3.4678748622465605 3.4678748622465605 6.00833760139686 0 1.066901560044258 1.3979400086720375 0.0 0.0 VP{I|L}GV[DV]K{I|L};VP{I|L}VG[DV]K{I|L};VP{I|L}G[{I|L}A]EK{I|L};VP{I|L}R[DV]K{I|L};VP{I|L}V[RD]K{I|L};VP{I|L}VAAEK{I|L};VP{I|L}[Q{I|L}]EK{I|L};VP{I|L}V[KT][PS]V;VR[DV]{I|L}PK{I|L};VR[{I|L}P][DV]K{I|L} 7.0587;6.4186;6.2555;6.2367;5.7284;5.6153;5.4335;4.5961;2.8101;2.3861 -;-;-;-;-;-;-;-;-;- 1100 + 1 1.081 107813.7 1.0 8449 4810 13248 HBL1_DMSO_200M_050219_2,13261 HBL1_DMSO_200M_050219_2,13261,VPLGVISRV True True VPLGVISRV 70.422983 470.302081286907 4130848.25 13248.0 ENSG00000063601|ENST00000445323|MTMR1;;nc|ENSG00000063601|Q13613-2|MTMR1;;nc|ENSG00000063601|Q13613|MTMR1 5.0200150807698565 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13262 70.425 101.0 598650.0 25 0 46842.0 6745 EDPFNIHDL 9 97 550.256908417535 1098.49926390187 2 550.2559692263603 MULTI CID FTMS 0 0 0 13248 295737.8125 0.2610039889142647 2 -0.1688690185546875 14 Unmodified _EDPFNIHDL_ ENSG00000141959|ENST00000349048|PFKL;ENST00000397961.6_1_21:45725201-45746742:+|nuORF;ENST00000460521.5_1_21:45741509-45746742:+|nuORF;ENST00000466134.5_1_21:45739892-45745863:+|nuORF;ENST00000467315.5_1_21:45739892-45746742:+|nuORF;ENST00000474114.5_1_21:45741509-45744801:+|nuORF;ENST00000495274.1_1_21:45742848-45745285:+|nuORF;ENST00000498841.5_1_21:45739892-45744801:+|nuORF;nc|ENSG00000141959|P17858-2|PFKL 6.723162845929126 0.6799819581413107 4 MED{I|L}[VG]EAHV 10 8 + 30.355 0.0 0.0 2.7633 2.7633 66.46 0.0 0.0 0.0 10.688812894078122 3.055074169904444 3.055074169904444 3.0102999566398125 0 0.0 0.0 0.0 0.0 MED{I|L}[VG]EAHV;MED{I|L}[PS]TAHV;M{I|L}YHHYHV;{[CP]|[EA]}[C(Carbamidomethyl (C))K]REAHV;M{[NV]|[RG]}{[WN]|[YH]}EAHV;{[CP]|[EA]}[C(Carbamidomethyl (C))K][VG]EAHV;MED{I|L}[DN][H{I|L}]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[QA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V];{[CP]|[EA]}[C(Carbamidomethyl (C))K][PS]TAHV;[DP]{I|L}T{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V] 2.7633;2.4892;2.0549;1.9705;1.6461;1.1323;1.0626;0.91665;0.85823;0.70532 -;-;-;-;-;-;-;-;-;- 611 + 1 1.081 56235.4 1.0 8450 4810 13248 HBL1_DMSO_200M_050219_2,13262 HBL1_DMSO_200M_050219_2,13262,EDPFNIHDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13263 70.428 122.0 401710.0 25 0 34402.0 + 40499 VISIPGEVSL 10 83 507.29746698919 1012.58038104518 2 507.2969848513603 MULTI CID FTMS 0 0 0 13248 308406.8125 0.070567739128455 3 -0.2637710571289062 15 Unmodified _VISIPGEVSL_ REV__ENSG00000118873|ENST00000358951|RAB3GAP2 20.453626601364224 0.5043500229302764 4 [EP]{I|L}EVKVTV 9 -1 + 50.741 0.0 0.0 5.011 5.011 83.895 0.0 0.0 0.0 13.187587626244117 7.1919646325935815 7.1919646325935815 13.187587626244117 0 0.7429928190999391 0.9208187539523752 0.0 0.0 [EP]{I|L}EVKVTV;{[QN]|[E{I|L}]|[KN]}PEVKVTV;{[TV]|[{I|L}S]}[HM]VKVTV;[EP]{I|L}{[TV]|[{I|L}S]}[VG]VTV;[MT][HV]VKVTV;{[QN]|[E{I|L}]|[KN]}P{[TV]|[{I|L}S]}[VG]VTV 5.011;3.7087;3.5939;1.7787;1.7126;0.47633 -;-;-;-;-;- 119 1 1.081 44573.9 1.0 8451 4810 13248 HBL1_DMSO_200M_050219_2,13263 HBL1_DMSO_200M_050219_2,13263,VISIPGEVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13264 70.433 288.0 458440.0 25 0 68736.0 + 15278 IPHTPIEI 8 142 460.2655300700955 918.516507206991 2 460.2661620974541 MULTI CID FTMS 0 0 0 13248 278494.0625 0.7735157892763359 -1 0.1543807983398437 16 Unmodified _IPHTPIEI_ ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR 49.66892048692302 0.1408045912742846 4 [HT]P{I|L}P{I|L}E{I|L} 8 4 + 46.961 0.0 0.0 5.1127 5.1127 70.573 0.0 0.0 0.0 1.249387366082999 5.271691835536281 1.249387366082999 1.249387366082999 0 0.5796896906561032 0.0 1.3539171939081172 0.0 [HT]P{I|L}P{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}P{I|L}E{I|L};[{I|L}P]HTP{I|L}E{I|L};[TP]H{I|L}P{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}TP{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}MSV;[HT]P{I|L}PE{I|L}{I|L};[{I|L}P]THP{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}PE{I|L}{I|L};[{I|L}P]HTPE{I|L}{I|L} 5.1127;4.9766;4.9008;4.6326;4.5828;4.5387;4.4288;4.4245;4.2928;4.2169 -;-;+;-;-;-;-;-;-;- + 1118 1 1.081 103623.1 1.0 8452 4810 13248 HBL1_DMSO_200M_050219_2,13264 HBL1_DMSO_200M_050219_2,13264,IPHTPIEI False True IPHTPIEI 70.432954 460.266162097454 3033494.25 13248.0 ENSG00000183337|ENST00000378444|BCOR;;nc|ENSG00000183337|Q6W2J9-3|BCOR;;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;;nc|ENSG00000183337|Q6W2J9-2|BCOR;;nc|ENSG00000183337|Q6W2J9-4|BCOR 3.557820955912272 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13265 70.443 548.0 214090.0 25 0 17560.0 + 26732 NYYNKVSTVF 10 140 617.8089858716469 1233.6034188100937 2 617.8094360232353 MULTI CID FTMS 0 0 0 13248 289236.9375 1.0 0 0.0 17 Unmodified _NYYNKVSTVF_ ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A 59.36838082759317 0.0382430275470746 4 [YN]KVYNSTV{M(Oxidation (M))|F} 10 4 + 71.648 0.0 0.0 5.808 5.808 84.151 0.0 0.0 0.0 13.42088102284356 4.370674166737274 4.370674166737274 9.164539485499256 0 1.1237125054200234 2.0 1.0 0.5796896906561032 [YN]KVYNSTV{M(Oxidation (M))|F};[YN]KVYGGSTV{M(Oxidation (M))|F};[YN]KVST[YN]V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}YVYNSTV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}VYYNSTV{M(Oxidation (M))|F};[YN]KVS[YN]TV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}YVYGGSTV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}VYYGGSTV{M(Oxidation (M))|F};[YN]K{[WT]|[RM]}[YN]V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}YVST[YN]V{M(Oxidation (M))|F} 5.808;5.0651;4.7797;4.7201;4.6808;4.6577;3.9772;3.9379;3.4726;3.4281 -;-;-;-;-;-;-;-;-;- 2726 1 1.081 90399.6 1.0 8453 4810 13248 HBL1_DMSO_200M_050219_2,13265 HBL1_DMSO_200M_050219_2,13265,NYYNKVSTVF True True NYYNKVSTVF 70.442594 617.809436023235 2584345.25 13248.0 ENSG00000107581|ENST00000369144|EIF3A;;nc|ENSG00000107581|Q14152-2|EIF3A 9.123387336730955 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13266 70.455 700.0 93829.0 25 0 20526.0 -1 0 57 1073.4184857117127 3217.2336277353384 3 1074.422534167767 MULTI CID FTMS 0 0 0 13248 272400.40625 0.4485438606782693 1 -0.0720291137695312 18 4 T 1 -1 5.4846 0.0 0.0 0.17047 0.0 0.0 2274.707090725376 838.4608248346311 3113.167915560008 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.17047 - 6 + 1 1.081 64204.2 1.0 8454 4810 13248 HBL1_DMSO_200M_050219_2,13266 HBL1_DMSO_200M_050219_2,13266, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13267 70.465 574.0 197160.0 25 0 23349.0 + 14895 ILLENFSAEK 10 120 582.3197938932963 1162.6250348533924 2 582.3224365115166 MULTI CID FTMS 0 0 0 13248 263914.03125 0.2097716321207358 2 -0.1688690185546875 19 Unmodified _ILLENFSAEK_ ENST00000560979.1_1_15:49715501-49715549:+|nuORF 27.088373467376528 0.3600710273140457 4 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SNT{I|L} 10 3 + 92.235 0.0 0.0 7.9333 7.9333 91.063 0.0 0.0 0.0 71.94405767821635 12.306634937682162 12.306634937682162 9.164539485499262 0 0.8494850021680094 2.0 0.7059771852360797 0.3807196863200844 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SNT{I|L};{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SGGT{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SNT{I|L};{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SA[SG]{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SGGT{I|L};{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}S[QT]V;{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SA{[SA]|[TG]}V;{I|L}{I|L}{I|L}E{I|L}{[CT]|[{M(Oxidation (M))|F}G]}YPV 7.9333;7.145;7.145;6.5048;6.0896;6.0324;5.9343;5.7166;5.6792;5.5129 -;-;-;+;-;-;-;-;-;- + 652 + 1 1.081 92651.9 1.0 8455 4810 13248 HBL1_DMSO_200M_050219_2,13267 HBL1_DMSO_200M_050219_2,13267,ILLENFSAEK False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13268 70.47 278.0 374390.0 25 0 31237.0 + 43035 VYAFSARPL 9 123 512.2849283693483 1022.5553038054968 2 512.2853881716728 MULTI CID FTMS 0 0 0 13248 259861.84375 0.2004175866996966 4 -0.4019393920898437 20 Unmodified _VYAFSARPL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 30.7034409873982 0.1405282614900322 4 VYA{M(Oxidation (M))|F}SARP{I|L} 9 0 + 77.507 0.0 0.0 7.5797 7.5797 93.678 0.0 0.0 0.0 58.70728350308305 7.743625330896776 7.743625330896776 14.436974992327125 0 0.9247425010840048 2.0 0.0 0.0 + + VYA{M(Oxidation (M))|F}SARP{I|L};VYA{M(Oxidation (M))|F}[WK]P{I|L};VY{I|L}[WK]AM{I|L};VY{I|L}[WK]VC{I|L};VYA{M(Oxidation (M))|F}S[R{I|L}][PA];VYA[H{I|L}][PG]GP{I|L};VYA[H{I|L}][NP]P{I|L};VY{I|L}[WK]{M(Oxidation (M))|F}[PA];VYA[{I|L}P][HN]P{I|L};VY{I|L}[HA][PG]GP{I|L} 7.5797;6.1679;5.7525;5.6358;5.6065;4.8455;4.6733;4.5064;4.2841;3.8899 +;-;-;-;-;-;-;-;-;- + 848 + 1 1.081 81882.2 1.0 8456 4810 13248 HBL1_DMSO_200M_050219_2,13268 HBL1_DMSO_200M_050219_2,13268,VYAFSARPL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13270 70.474 4.3 13067000.0 25 0 2111200.0 + 9114 FFPDKPITQY 10 67 628.3213562907354 1254.6281596482706 2 628.3220703005791 MULTI CID FTMS 0 0 0 13269 12820642.0 0.5340684001553303 -4 0.4497604370117187 1 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 57.72198328787511 0.0425618229276495 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]TQY 10 0 + 56.674 0.0 0.0 4.5172 4.5172 70.889 0.0 0.0 0.0 32.22357194224834 7.010365488874939 7.010365488874939 2.768024924119672 0 0.4247425010840047 0.0 0.3807196863200844 1.4005149978319906 + + {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}]QY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}][AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]T[AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]T[AG]Y;{[QD]|[EN]|[WG]|[KD]|[RS]}P[{I|L}P]TPDP[Y{I|L}];[DP]K[{I|L}P]TQY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[DP]P[K{I|L}]TQY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[DP]PT[K{I|L}]QY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 4.5172;4.2966;4.2773;3.2876;3.0476;3.009;2.948;2.9007;2.7989;2.559 +;-;-;-;-;-;-;-;-;- + 336 + 1 1.081 46772.5 1.0 8457 4811 13269 HBL1_DMSO_200M_050219_2,13270 HBL1_DMSO_200M_050219_2,13270,FFPDKPITQY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13271 70.475 20.0 1970400.0 25 0 636990.0 -1 0 24 1066.0956183117946 3195.265025535584 3 1066.430712878704 MULTI CID FTMS 0 0 0 13269 5152587.5 0.2689907086627163 3 -0.3299102783203125 2 4 E 1 -1 6.9897 0.0 0.0 0.21875 0.0 0.0 2539.038293213121 524.1626070611936 3063.2009002743152 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21875 - 3 + 1 1.081 48003.7 1.0 8458 4811 13269 HBL1_DMSO_200M_050219_2,13271 HBL1_DMSO_200M_050219_2,13271, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13272 70.477 23.0 2061800.0 25 0 187980.0 + 10798 FYQPKIQQF 9 72 599.8165997066964 1197.6186464801926 2 599.8167602419853 MULTI CID FTMS 0 0 0 13269 2396526.5 0.8871816532936879 1 -0.0968399047851562 3 Unmodified _FYQPKIQQF_ ENSG00000140525|ENST00000310775|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI 30.22481116460888 0.1466181017706357 4 [KP]{I|L}QQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F} 9 6 + 32.298 0.0 0.0 2.6968 2.6968 74.996 0.0 0.0 0.0 5.509074688805818 14.109915303255612 5.509074688805818 9.208187539523756 0 0.242992819099939 0.0 0.0 0.8494850021680094 [KP]{I|L}QQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F};[KP]{I|L}[AG]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F};[KP]{I|L}Q[AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F};[Q{I|L}][KP]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{M(Oxidation (M))|F} 2.6968;1.9279;1.9279;1.0753 -;-;-;- 194 1 1.081 40175.4 1.0 8459 4811 13269 HBL1_DMSO_200M_050219_2,13272 HBL1_DMSO_200M_050219_2,13272,FYQPKIQQF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13273 70.478 60.0 1268400.0 25 0 142410.0 + 35599 STVPGLYNV 9 112 475.2533846424348 948.4922163516696 2 475.2535278201103 MULTI CID FTMS 0 0 0 13269 1402734.75 1.0 0 0.0 4 Unmodified _STVPGLYNV_ ENSG00000122592|ENST00000242159|HOXA7 42.09456458481378 0.0639583784996157 4 {[VA]|[{I|L}G]}PYD 5 6 24.011 0.0 0.0 2.5315 0.0 0.0 0.0 400.2214668312912 400.2214668312912 6.761463995014232 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.4247425010840047 0.0 {[VA]|[{I|L}G]}PYD 2.5315 - 270 1 1.081 62162.2 1.0 8460 4811 13269 HBL1_DMSO_200M_050219_2,13273 HBL1_DMSO_200M_050219_2,13273,STVPGLYNV True True STVPGLYNV 70.478164 475.25352782011 12302089.0 13269.0 ENSG00000122592|ENST00000242159|HOXA7 5.998447418212891 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13274 70.479 51.0 995840.0 25 0 98378.0 + 23296 LSYSQAVTV 9 84 484.2583831501523 966.5022133671048 2 484.2584716677666 MULTI CID FTMS 0 0 0 13269 996880.3125 0.0028363638037413 29 -2.9547576904296875 5 Unmodified _LSYSQAVTV_ REV__ENSG00000115145|ENST00000263904|STAM2 21.74664581756881 0.2544899275067181 4 TCTV 4 -1 28.22 0.0 0.0 2.9198 0.0 0.0 544.3222339743297 0.0 544.3222339743297 0.0 12.192093041866308 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TCTV 2.9198 - 194 + 1 1.081 47937.6 1.0 8461 4811 13269 HBL1_DMSO_200M_050219_2,13274 HBL1_DMSO_200M_050219_2,13274,LSYSQAVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13275 70.481 68.0 706720.0 25 0 132170.0 + -1 KVRPLNIFM 9 71 567.3295360742105 1132.644519215221 2 567.3301269412041 MULTI CID FTMS 0 0 0 13269 892333.5 0.8642124587001272 -2 0.226409912109375 6 Oxidation (M) _KVRPLNIFM(Oxidation (M))_ REV__ENSG00000179869|ENST00000435803|ABCA13;REV__ENST00000484268.1_1_7:48352666-48443694:+|nuORF;REV__nc|ENSG00000179869|Q86UQ4-3|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-4|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-5|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-6|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-7|ABCA13;REV__nc|ENSG00000179869|Q86UQ4|ABCA13 2.302733041254933 0.8342969208511092 4 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 2 -1 14.949 0.0 0.0 1.3198 0.0 0.0 820.5295422638522 0.0 820.5295422638522 0.0 5.679140395192128 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.3198 + + 8 + 1 1.081 40939.1 1.0 8462 4811 13269 HBL1_DMSO_200M_050219_2,13275 HBL1_DMSO_200M_050219_2,13275,KVRPLNIFM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13276 70.484 146.0 538970.0 25 0 147440.0 -1 0 34 1144.8079058928845 3431.4018882788537 3 1145.142504870892 MULTI CID FTMS 0 0 0 13269 868764.5625 0.0299172353342746 -3 0.3198623657226562 7 4 E{M(Oxidation (M))|F} 2 -1 9.464 0.0 0.0 0.2758 0.0 0.0 2775.172672737149 377.10166345767817 3152.274336194827 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{M(Oxidation (M))|F} 0.2758 - 5 + 1 1.081 73030.4 1.0 8463 4811 13269 HBL1_DMSO_200M_050219_2,13276 HBL1_DMSO_200M_050219_2,13276, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13277 70.485 45.0 1232200.0 25 0 133170.0 + 35062 SQTSATFQL 9 98 491.7465641134504 981.4785752937008 2 491.7465698122978 MULTI CID FTMS 0 0 0 13269 853605.125 0.6227677101696167 -2 0.226409912109375 8 Unmodified _SQTSATFQL_ ENSG00000159593|ENST00000290810|NAE1;ENST00000563221.5_1_16:66836914-66839833:-|nuORF;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-3|NAE1;nc|ENSG00000159593|Q13564-4|NAE1 39.94969957227396 0.0757326808254658 4 {[SA]|[TG]}GT{[SA]|[TG]}T 7 5 28.604 0.0 0.0 2.9144 0.0 0.0 0.0 403.1989316888974 403.1989316888974 11.680760084226666 0.0 0.0 0.0 0 0.3252574989159953 1.2218487496163564 1.305462187404089 0.0 {[SA]|[TG]}GT{[SA]|[TG]}T 2.9144 - 197 1 1.081 47897.0 1.0 8464 4811 13269 HBL1_DMSO_200M_050219_2,13277 HBL1_DMSO_200M_050219_2,13277,SQTSATFQL True True SQTSATFQL 70.485304 491.746569812298 12073911.0 13269.0 ENST00000563221.5_1_16:66836914-66839833:-|nuORF;;nc|ENSG00000159593|Q13564-4|NAE1;;nc|ENSG00000159593|Q13564-3|NAE1;;nc|ENSG00000159593|Q13564-2|NAE1;;ENSG00000159593|ENST00000290810|NAE1 5.750678698221843 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13278 70.487 69.0 1487100.0 25 0 166630.0 11496 GILIKARNF 9 94 344.55039674685906 1030.6293608407773 3 344.5500976443291 MULTI CID FTMS 0 0 0 13269 737115.1875 0.643908611150239 -1 0.0720291137695312 9 Unmodified _GILIKARNF_ ENSG00000072501|ENST00000322213|SMC1A 20.41453444215458 0.284085796332423 4 {[VA]|[{I|L}G]}{I|L}KA{M(Oxidation (M))|F} 6 3 50.01 0.0 0.0 4.8524 0.0 0.0 0.0 398.2171419733032 398.2171419733032 43.02046884880937 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.4247425010840047 {[VA]|[{I|L}G]}{I|L}KA{M(Oxidation (M))|F} 4.8524 - 48 + 1 1.081 88616.6 1.0 8465 4811 13269 HBL1_DMSO_200M_050219_2,13278 HBL1_DMSO_200M_050219_2,13278,GILIKARNF False True GIIKAFRNI 70.486941 344.550097644329 8040918.0 13269.0 ENSG00000174444|ENST00000307961|RPL4;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;;ENST00000422486.1_1_3:185135660-185136437:-|nuORF 2.905646085739136 3.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13279 70.488 63.0 1131500.0 25 0 261830.0 + 21947 LPPLHLLR 8 82 320.2117583217455 957.6134455654365 3 320.2115356326103 MULTI CID FTMS 0 0 0 13269 654756.0625 0.0864249662025083 41 -4.12158203125 10 Unmodified _LPPLHLLR_ REV__ENST00000295522.3_1_3:190039874-190040219:-|nuORF 22.736283301280096 0.5659792798204337 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 -1 + 58.772 0.0 0.0 6.1373 6.1373 78.195 0.0 0.0 0.0 47.80259340951212 5.495462078546403 5.495462078546403 3.0102999566398125 0 0.0 1.3010299956639813 0.0 0.2396518287104437 {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 6.1373;5.823;5.5086;3.8356 -;+;-;- + 81 + 1 1.081 63694.6 1.0 8466 4811 13269 HBL1_DMSO_200M_050219_2,13279 HBL1_DMSO_200M_050219_2,13279,LPPLHLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13280 70.49 69.0 714470.0 25 0 111130.0 + 40674 VLFCRKPNL 9 89 545.3171335917162 1088.6197142502324 2 545.3176757693291 MULTI CID FTMS 0 0 0 13269 644153.875 0.2293212297973403 -9 0.9055938720703124 11 Unmodified _VLFCRKPNL_ REV__ENSG00000107815|ENST00000311916|TWNK;REV__nc|ENSG00000107815|Q96RR1-2|TWNK;REV__nc|ENSG00000107815|Q96RR1-3|TWNK 4.75600775471527 0.7486543447549536 4 {I|L} 1 -1 9.464 0.0 0.0 0.86935 0.0 0.0 957.5245432070668 0.0 957.5245432070668 0.0 -11.505149978319906 -11.505149978319906 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.86935 + + 15 + 1 1.081 46921.4 1.0 8467 4811 13269 HBL1_DMSO_200M_050219_2,13280 HBL1_DMSO_200M_050219_2,13280,VLFCRKPNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13281 70.492 62.0 744840.0 25 0 81378.0 + 43091 VYMTEPIDEY 10 75 630.2782843551423 1258.5420157770843 2 630.2792846560478 MULTI CID FTMS 0 0 0 13269 409554.3125 0.4207297357407457 2 -0.191741943359375 12 Unmodified _VYMTEPIDEY_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 7.289230182591677 0.6929195370588109 4 [{I|L}P]DE 4 6 19.385 0.0 0.0 1.5403 0.0 0.0 0.0 801.3123185277997 801.3123185277997 3.900925144087779 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + [{I|L}P]DE 1.5403 + + 150 1 1.081 41614.2 1.0 8468 4811 13269 HBL1_DMSO_200M_050219_2,13281 HBL1_DMSO_200M_050219_2,13281,VYMTEPIDEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13282 70.494 117.0 1096500.0 25 0 160530.0 + 25958 NLPDEIYHV 9 134 550.2742398171284 1098.5339267010568 2 550.2728759646416 MULTI CID FTMS 0 0 0 13269 413453.78125 0.0481433265657325 -2 0.226409912109375 13 Unmodified _NLPDEIYHV_ ENSG00000148335|ENST00000372483|NTMT1 50.855029805455786 0.0384952370514206 4 {[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}YHV 9 0 + 66.71 0.0 0.0 6.0726 6.0726 87.387 0.0 0.0 0.0 28.054373677399106 8.621506059964545 8.621506059964545 10.413004791563893 0 0.6382104921644451 2.0 0.3494850021680094 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}YHV;{[QV]|[N{I|L}]|[RA]|[KV]}VMSHYHV;{[QV]|[N{I|L}]|[RA]|[KV]}P[YG]HYHV;{[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}[HV]Y;{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}RPCHV;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]CHYHV;{[QV]|[N{I|L}]|[RA]|[KV]}VMSH[HV]Y;{[QV]|[N{I|L}]|[RA]|[KV]}{[QN]|[E{I|L}]|[KN]}[DP]YHV;{[QV]|[N{I|L}]|[RA]|[KV]}V[WC(Carbamidomethyl (C))][TA]HV;{[QV]|[N{I|L}]|[RA]|[KV]}PD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RP]M 6.0726;5.1247;4.3216;4.2054;3.7459;3.6966;3.2575;3.1351;3.0811;3.0687 +;-;-;-;-;-;-;-;-;- + 2214 + 1 1.081 101893.4 1.0 8469 4811 13269 HBL1_DMSO_200M_050219_2,13282 HBL1_DMSO_200M_050219_2,13282,NLPDEIYHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13283 70.505 619.0 241210.0 25 0 42018.0 -1 0 108 1031.451409468261 3091.332399004984 3 1031.790332019329 MULTI CID FTMS 0 0 0 13269 318400.6875 0.1407430378704705 5 -0.444183349609375 14 4 [QT]PGYAQT 8 -1 22.718 0.0 0.0 0.7349 0.0 0.0 0.0 2241.916785561878 2241.916785561878 2.392493313923296 0.0 0.0 0.0 0 0.0 0.0 0.5796896906561032 0.5484550065040282 [QT]PGYAQT 0.7349 - 11133 1 1.081 101029.1 1.0 8470 4811 13269 HBL1_DMSO_200M_050219_2,13283 HBL1_DMSO_200M_050219_2,13283, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13284 70.514 524.0 284850.0 25 0 54528.0 + 35288 SSMEEAEWLGQ 11 156 633.7697308907724 1265.5249088483447 2 633.7695800662041 MULTI CID FTMS 0 0 0 13269 304196.75 0.9726958954860347 -1 0.0720291137695312 15 Unmodified _SSMEEAEWLGQ_ REV__ENSG00000188897|ENST00000696174|unknown 16.149105407346934 0.6992268271266642 4 DEE{I|L}{I|L}{[QG]|[NA]} 7 -1 38.703 0.0 0.0 3.0582 0.0 0.0 463.1573353498063 0.0 463.1573353498063 0.0 10.70489028679166 0.0 0.0 0 0.4247425010840047 0.0 0.75 0.0 DEE{I|L}{I|L}{[QG]|[NA]} 3.0582 - 1554 1 1.081 120104.4 1.0 8471 4811 13269 HBL1_DMSO_200M_050219_2,13284 HBL1_DMSO_200M_050219_2,13284,SSMEEAEWLGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13285 70.524 536.0 291210.0 25 0 27742.0 + 43680 YAVDAYFREA 10 122 602.7850966714942 1203.5556404097883 2 602.7855712771416 MULTI CID FTMS 0 0 0 13269 292659.84375 1.0 0 0.0 16 Unmodified _YAVDAYFREA_ ENSG00000102038|ENST00000371121|SMARCA1;ENSG00000153147|ENST00000283131|SMARCA5;nc|ENSG00000102038|P28370-2|SMARCA1;nc|ENSG00000102038|P28370|SMARCA1 65.47368725323818 0.0222277162070287 4 YAVDAY{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 10 2 + 103.88 0.0 0.0 8.6311 8.6311 79.676 0.0 0.0 0.0 33.81332369420004 0.3621217265444443 0.3621217265444443 0.3621217265444443 0 1.4049471895720984 2.0 0.805462187404089 1.1237125054200234 YAVDAY{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};YAVDAY{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V;YAVADY{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};YAVADY{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V;YAVWY{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};YAVWY{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V;YAVAD[HV]VDC{I|L};YAVDA{M(Oxidation (M))|F}DE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};YAVDA[HV]VDC{I|L};YAVA{M(Oxidation (M))|F}M{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 8.6311;8.6011;8.0318;8.0017;7.673;7.6429;7.2068;6.9879;6.9753;6.9249 -;-;-;-;-;-;-;-;-;- 1883 + 1 1.081 115635.9 1.0 8472 4811 13269 HBL1_DMSO_200M_050219_2,13285 HBL1_DMSO_200M_050219_2,13285,YAVDAYFREA True True YAVDAYFREA 70.523595 602.785571277142 2378668.25 13269.0 nc|ENSG00000102038|P28370|SMARCA1;;nc|ENSG00000102038|P28370-2|SMARCA1;;ENSG00000102038|ENST00000371121|SMARCA1;;ENSG00000153147|ENST00000283131|SMARCA5 7.630793412526448 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13286 70.536 705.0 237930.0 25 0 57427.0 -1 0 80 1150.1396356372015 3447.397077511805 3 1150.475024402142 MULTI CID FTMS 0 0 0 13269 281385.0 0.8120954266600804 -1 0.0720291137695312 17 4 GWV 3 -1 12.703 0.0 0.0 0.36848 0.0 0.0 2635.9730795643427 466.2309664361938 3102.2040460005364 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GWV 0.36848 - 86 + 1 1.081 136627.2 1.0 8473 4811 13269 HBL1_DMSO_200M_050219_2,13286 HBL1_DMSO_200M_050219_2,13286, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13287 70.545 541.0 530000.0 25 0 33138.0 + -1 QANLWVMQV 9 241 552.7804016916143 1103.5462504500283 2 552.7808715701103 MULTI CID FTMS 0 0 0 13269 270840.15625 0.4107027417603179 -4 0.4497604370117187 18 Oxidation (M) _QANLWVM(Oxidation (M))QV_ REV__ENSG00000153246|ENST00000283243|PLA2R1;REV__nc|ENSG00000153246|Q13018-2|PLA2R1 21.74664581756881 0.2544899275067181 4 EV{I|L}P{[C(Carbamidomethyl (C))E]|[WC]}A 7 -1 32.963 0.0 0.0 2.987 0.0 0.0 287.1958180158219 0.0 287.1958180158219 0.0 10.562921620997924 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 EV{I|L}P{[C(Carbamidomethyl (C))E]|[WC]}A 2.987 - 2194 1 1.081 214810.3 1.0 8474 4811 13269 HBL1_DMSO_200M_050219_2,13287 HBL1_DMSO_200M_050219_2,13287,QANLWVMQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13288 70.557 570.0 243030.0 25 0 26088.0 + 45940 YYYDPQTGLY 10 145 641.7841045918672 1281.5536562505342 2 641.7845336794853 MULTI CID FTMS 0 0 0 13269 257204.078125 1.0 0 0.0 19 Unmodified _YYYDPQTGLY_ ENSG00000182872|ENST00000377604|RBM10;nc|ENSG00000182872|P98175-2|RBM10;nc|ENSG00000182872|P98175-3|RBM10;nc|ENSG00000182872|P98175-4|RBM10;nc|ENSG00000182872|P98175-5|RBM10 82.5293158979368 0.0149949422200525 4 YYDY[QP]TG{I|L}Y 10 2 + 80.186 0.0 0.0 6.257 6.257 82.81 0.0 0.0 0.0 12.180974923022632 16.53212513775344 12.180974923022632 6.020599913279625 0 1.4802046884880935 2.0 0.9247425010840048 0.805462187404089 YYDY[QP]TG{I|L}Y;YYYD[QP]TG{I|L}Y;[QP]TGYYDY{I|L}Y;YYYPGWTG{I|L}Y;[QP]TG{I|L}YDYYY;YY[WM]WTG{I|L}Y;[QP]TGY{I|L}DYYY;[QT]PGYYDY{I|L}Y;[QP]TDMAWTG{I|L}Y;[QP]GTYYDY{I|L}Y 6.257;5.7872;5.3065;5.2876;5.0303;4.8616;4.7198;4.6918;4.6745;4.6124 -;+;-;-;-;-;-;-;-;- + 3550 1 1.081 107298.8 1.0 8475 4811 13269 HBL1_DMSO_200M_050219_2,13288 HBL1_DMSO_200M_050219_2,13288,YYYDPQTGLY True True YYYDPQTGLY 70.55657 641.784533679485 2949488.75 13269.0 nc|ENSG00000182872|P98175-2|RBM10;;nc|ENSG00000182872|P98175-4|RBM10;;ENSG00000182872|ENST00000377604|RBM10;;nc|ENSG00000182872|P98175-3|RBM10;;nc|ENSG00000182872|P98175-5|RBM10 7.335199356079102 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13289 70.567 585.0 146940.0 25 0 7954.5 + 18330 KVLEPSETLVV 11 121 607.355950189554 1212.697347445908 2 607.3563110232353 MULTI CID FTMS 0 0 0 13269 240269.21875 0.396787056033225 2 -0.191741943359375 20 Unmodified _KVLEPSETLVV_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-8|SON;nc|ENSG00000159140|P18583-9|SON 23.78978130925829 0.5336113198261219 4 {[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}VRT{I|L}VV 10 6 + 50.072 0.0 0.0 4.129 4.129 77.336 0.0 0.0 0.0 11.91885526238913 25.04481831068464 11.91885526238913 9.164539485499256 0 0.6677353201839438 1.2218487496163564 0.8494850021680094 0.3807196863200844 {[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}VRT{I|L}VV;{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}V[VG]T{I|L}VV;[YQ][HV]VRT{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}{[DA]|[EG]}{I|L}VRT{I|L}VV;[YN][H{I|L}]VRT{I|L}VV;{[QG]|[NA]}[WR]V[VG]T{I|L}VV;{[QN]|[E{I|L}]|[KN]}[DG]{I|L}V[VG]T{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}{[DA]|[EG]}{I|L}V[VG]T{I|L}VV;{[QG]|[NA]}P[{I|L}V][C(Carbamidomethyl (C))K]T{I|L}VV;[TP]{[ES]|[DT]|[{I|L}C]}{I|L}V[VG]T{I|L}VV 4.129;3.3732;2.728;2.6004;2.5109;2.4677;2.4513;1.8476;1.826;1.7288 -;-;-;-;-;-;-;-;-;- 735 1 1.081 67006.7 1.0 8476 4811 13269 HBL1_DMSO_200M_050219_2,13289 HBL1_DMSO_200M_050219_2,13289,KVLEPSETLVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13291 70.571 9.5 6010300.0 25 0 703150.0 + 6085 DSQILPKI 8 87 457.271325564497 912.528098195794 2 457.2715637087822 MULTI CID FTMS 0 0 0 13290 5673444.0 0.80343633686626 1 -0.0949020385742187 1 Unmodified _DSQILPKI_ ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF 54.773552608820026 0.1167943196628344 4 [AG]SD{I|L} 5 7 36.529 0.0 0.0 4.003 0.0 0.0 0.0 466.3037384147971 466.3037384147971 17.600967152141493 0.0 0.0 0.0 0 1.0 2.0 0.9829535345634596 0.0 [AG]SD{I|L} 4.003 - 74 1 1.082 47901.4 1.0 8477 4812 13290 HBL1_DMSO_200M_050219_2,13291 HBL1_DMSO_200M_050219_2,13291,DSQILPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13292 70.572 8.5 5280500.0 25 0 412980.0 -1 0 70 571.2863573968497 570.2790809302496 1 571.2891723513603 MULTI CID FTMS 0 0 0 13290 5605088.5 0.6769944842428247 -2 0.1688690185546875 2 4 [EP]{I|L} 3 -1 25.942 0.0 0.0 4.549 0.0 0.0 0.0 228.076022418784 228.076022418784 6.217327760564686 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [EP]{I|L} 4.549 - 25 1 1.082 42725.5 1.0 8478 4812 13290 HBL1_DMSO_200M_050219_2,13292 HBL1_DMSO_200M_050219_2,13292, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13293 70.573 18.0 2201600.0 25 0 290560.0 + 39157 TYNTQVNFM 9 76 559.2529013077852 1116.4912496823704 2 559.2535278201103 MULTI CID FTMS 0 0 0 13290 2737474.25 0.6781683658298775 1 -0.0949020385742187 3 Unmodified _TYNTQVNFM_ ENSG00000076924|ENST00000358368|XAB2;ENST00000595288.5_1_19:7684558-7685401:-|nuORF 30.63653989081413 0.1413794767160703 4 [YT]NTQ 5 4 38.984 0.0 0.0 3.4917 0.0 0.0 0.0 506.20649561426416 506.20649561426416 21.025684359364405 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.3494850021680094 + [YT]NTQ 3.4917 + + 151 1 1.082 37063.3 1.0 8479 4812 13290 HBL1_DMSO_200M_050219_2,13293 HBL1_DMSO_200M_050219_2,13293,TYNTQVNFM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13294 70.575 26.0 1563500.0 25 0 117590.0 23696 LTTEQIEETL 10 76 588.8034842481705 1175.592415563141 2 588.8036376833916 MULTI CID FTMS 0 0 0 13290 2189928.0 0.6405649324945947 1 -0.0949020385742187 4 Unmodified _LTTEQIEETL_ ENSG00000182606|ENST00000327628|TRAK1 47.594388314883695 0.0942698883389255 4 [{I|L}T]KDD{I|L}EET{I|L} 10 3 + 94.959 0.0 0.0 8.0775 8.0775 94.539 0.0 0.0 0.0 14.771212547196626 76.26200679392056 14.771212547196626 13.750612633917 0 0.9247425010840048 1.3979400086720375 1.5356668758921828 0.0 [{I|L}T]KDD{I|L}EET{I|L};[{I|L}T]E[QT]{I|L}EET{I|L};{[QN]|[E{I|L}]|[KN]}[KS]D{I|L}EET{I|L};{[QN]|[E{I|L}]|[KN]}T[QT]{I|L}EET{I|L};{[QN]|[E{I|L}]|[KN]}T[WR]EET{I|L};{[ET]|[MV]}{I|L}[QT]{I|L}EET{I|L};{[QN]|[E{I|L}]|[KN]}[DV][KT]EET{I|L};{[ET]|[MV]}[WR]{I|L}EET{I|L};{[QN]|[E{I|L}]|[KN]}T[NP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ET{I|L};[{I|L}T]E[NP]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}T{I|L} 8.0775;6.9078;6.7723;6.6855;5.7685;5.2298;4.816;4.761;4.7292;4.3342 -;-;-;-;-;-;-;-;-;- 492 1 1.082 36535.4 1.0 8480 4812 13290 HBL1_DMSO_200M_050219_2,13294 HBL1_DMSO_200M_050219_2,13294,LTTEQIEETL True True KTIDDLEETL 70.574663 588.803637683392 49473620.0 13290.0 nc|ENSG00000198467|P07951-2|TPM2;;nc|ENSG00000198467|P07951-3|TPM2 4.113810459772746 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13295 70.576 21.0 2651800.0 25 0 368870.0 + 3711 DAFPNIEKV 9 92 516.7716121511618 1031.5286713691237 2 516.7720214724541 MULTI CID FTMS 0 0 0 13290 1140989.0 0.2053684292943519 -2 0.1688690185546875 5 Unmodified _DAFPNIEKV_ ENSG00000129968|ENST00000292577|ABHD17A;ENST00000458502.2_1_17:20744816-20747364:+|nuORF;nc|ENSG00000129968|Q96GS6-2|ABHD17A 22.774965066869 0.2414061210083823 4 {[DA]|[EG]}{M(Oxidation (M))|F}PN{I|L}EKV 9 0 + 46.358 0.0 0.0 4.4941 4.4941 79.49 0.0 0.0 0.0 28.65487912815688 7.280156171532184 7.280156171532184 9.208187539523747 0 0.3807196863200844 1.3979400086720375 0.2742275032520141 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}PN{I|L}EKV;{[DA]|[EG]}{M(Oxidation (M))|F}PGG{I|L}EKV;W{M(Oxidation (M))|F}PNKKNV;{[DA]|[EG]}{M(Oxidation (M))|F}PAA[DV]KV;W{M(Oxidation (M))|F}PGGKKNV;W{M(Oxidation (M))|F}P[MN][KP]{I|L};W{M(Oxidation (M))|F}PNKKGGV;W{M(Oxidation (M))|F}[WR][QP]{I|L};{[VA]|[{I|L}G]}[PS][HK]K{[YC]|[HE]};[KP]E[HK]K{[YC]|[HE]} 4.4941;3.6014;2.219;1.9308;1.3211;1.2128;1.0553;0.93287;0.57557;0.062039 +;-;-;-;-;-;-;-;-;- + 461 + 1 1.082 48239.3 1.0 8481 4812 13290 HBL1_DMSO_200M_050219_2,13295 HBL1_DMSO_200M_050219_2,13295,DAFPNIEKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13296 70.577 33.0 1205100.0 25 0 194160.0 + 35839 SVLDLSHNQL 10 72 563.2988440877458 1124.5831352422915 2 563.2993041872978 MULTI CID FTMS 0 0 0 13290 1211071.625 0.967668035983776 1 -0.0949020385742187 6 Unmodified _SVLDLSHNQL_ ENSG00000177731|ENST00000327031|FLII;ENST00000478416.1_1_17:18157237-18162004:-|nuORF;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENST00000584444.5_1_17:18156710-18162004:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 47.594388314883695 0.0942698883389255 4 [VS]{I|L}D{I|L}SH 7 3 62.211 0.0 0.0 5.5319 0.0 0.0 0.0 370.1733797662719 370.1733797662719 50.22115729114184 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3494850021680094 0.0 + [VS]{I|L}D{I|L}SH 5.5319 + + 125 + 1 1.082 36373.1 1.0 8482 4812 13290 HBL1_DMSO_200M_050219_2,13296 HBL1_DMSO_200M_050219_2,13296,SVLDLSHNQL True True SVLDLSHNQL 70.57702 563.299304187298 11836704.0 13290.0 ENST00000584444.5_1_17:18156710-18162004:-|nuORF;;nc|ENSG00000177731|Q13045-3|FLII;;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;ENST00000478416.1_1_17:18157237-18162004:-|nuORF;;nc|ENSG00000177731|Q13045-2|FLII 7.349832852681478 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13297 70.582 277.0 646630.0 25 0 94108.0 -1 0 77 1052.4203073876463 3154.2390927631395 3 1052.755419909954 MULTI CID FTMS 0 0 0 13290 1207149.375 0.663298225553383 1 -0.0949020385742187 7 4 YG 2 -1 9.464 0.0 0.0 0.30004 0.0 0.0 1449.4819649328645 1481.6454169495585 2931.127381882423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.30004 - 311 + 1 1.082 165402.9 1.0 8483 4812 13290 HBL1_DMSO_200M_050219_2,13297 HBL1_DMSO_200M_050219_2,13297, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13298 70.583 41.0 1471900.0 25 0 176500.0 + 32542 SANHNILQI 9 80 505.27489251701945 1008.5352321008388 2 505.2750427126884 MULTI CID FTMS 0 0 0 13290 782339.6875 0.038051067433207 -3 0.3232498168945312 8 Unmodified _SANHNILQI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000581551.1_1_17:62499042-62499524:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;nc|ENSG00000108654|P17844-2|DDX5 27.628801355627647 0.1796483985696185 4 N{I|L}{I|L}Q{I|L} 5 4 27.677 0.0 0.0 2.7443 0.0 0.0 409.1708546369157 0.0 409.1708546369157 0.0 4.110600080386035 0.0 0.0 0 0.6237125054200234 0.0 0.0 0.6747425010840047 + N{I|L}{I|L}Q{I|L} 2.7443 + + 178 1 1.082 52709.5 1.0 8484 4812 13290 HBL1_DMSO_200M_050219_2,13298 HBL1_DMSO_200M_050219_2,13298,SANHNILQI False True SANHNILQI 70.583351 505.275042712688 130003192.0 13290.0 ENST00000432525.5_1_22:38886367-38903636:-|nuORF;;ENST00000581551.1_1_17:62499042-62499524:-|nuORF;;nc|ENSG00000100201|Q92841-1|DDX17;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5;;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;;ENSG00000100201|ENST00000403230|DDX17;;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;;nc|ENSG00000100201|Q92841-3|DDX17;;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;;nc|ENSG00000100201|Q92841-2|DDX17 4.498717069625855 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13299 70.585 50.0 978480.0 25 0 138360.0 3299 AYILRVDPV 9 88 523.3046063582137 1044.5946597832274 2 523.3040649294853 MULTI CID FTMS 0 0 0 13290 665909.3125 0.2839924422560685 13 -1.2069091796875 9 Unmodified _AYILRVDPV_ ENSG00000130656|ENST00000252951|HBZ 5.230669730166228 0.7320841359114558 4 V 1 8 11.99 0.0 0.0 1.1478 0.0 0.0 927.5150908518782 0.0 927.5150908518782 0.0 1.1522446068913703 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1478 + + 24 + 1 1.082 47388.5 1.0 8485 4812 13290 HBL1_DMSO_200M_050219_2,13299 HBL1_DMSO_200M_050219_2,13299,AYILRVDPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13300 70.587 133.0 678170.0 25 0 63805.0 -1 0 92 577.3339812489934 576.3267047823933 1 577.3336669802666 MULTI CID FTMS 0 0 0 13290 630541.125 0.5437755504748509 2 -0.2330703735351562 10 4 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}GAV 6 -1 + 41.482 0.0 0.0 7.1977 7.1977 76.434 0.0 0.0 0.0 6.197887582883936 22.524545830169 6.197887582883936 0.1772876696043113 0 0.908628003777275 0.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}GAV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}QV;{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}G{I|L}AV;[Q{I|L}]{M(Oxidation (M))|F}AV;{[MS]|[{M(Oxidation (M))|F}A]}GA{I|L}V;{[VA]|[{I|L}G]}A{M(Oxidation (M))|F}AV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}AV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[AG]V 7.1977;7.1669;5.0941;4.9355;4.6409;4.5138;4.3379;3.1231;2.7014;2.4329 -;-;-;-;-;-;-;-;-;- 110 1 1.082 74978.9 1.0 8486 4812 13290 HBL1_DMSO_200M_050219_2,13300 HBL1_DMSO_200M_050219_2,13300, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13301 70.589 46.0 1044300.0 25 0 90985.0 + 33279 SFPQLRATM 9 78 525.7730634458587 1049.5315739585174 2 525.7739135622978 MULTI CID FTMS 0 0 0 13290 502266.15625 0.6339059601256317 1 -0.0949020385742187 11 Unmodified _SFPQLRATM_ ENSG00000138279|ENST00000372921|ANXA7;nc|ENSG00000138279|P20073|ANXA7 20.41453444215458 0.284085796332423 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PQ{I|L} 5 4 40.93 0.0 0.0 3.8998 0.0 0.0 0.0 474.2172335260376 474.2172335260376 29.147126041195204 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.3494850021680094 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PQ{I|L} 3.8998 + + 113 + 1 1.082 45051.7 1.0 8487 4812 13290 HBL1_DMSO_200M_050219_2,13301 HBL1_DMSO_200M_050219_2,13301,SFPQLRATM False True SFPQLRATM 70.588707 525.773913562298 6130022.0 13290.0 nc|ENSG00000138279|P20073|ANXA7;;ENSG00000138279|ENST00000372921|ANXA7 5.292009671529134 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13302 70.593 203.0 580180.0 25 0 24934.0 -1 MYFWKRFCFWK 11 88 857.9015707633433 1713.7885885934866 2 858.4039184451103 MULTI CID FTMS 0 0 0 13290 477467.0 0.3626209547881046 -3 0.3232498168945312 12 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 4 [MN]PN{I|L}NADQ 9 -1 77.986 0.0 0.0 4.5505 0.0 0.0 0.0 713.3354586236936 713.3354586236936 33.10402823752675 0.0 0.0 0.0 0 1.274227503252014 1.5228787452803376 0.0 1.079689690656103 [MN]PN{I|L}NADQ 4.5505 - 559 + 1 1.082 84683.5 1.0 8488 4812 13290 HBL1_DMSO_200M_050219_2,13302 HBL1_DMSO_200M_050219_2,13302,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13303 70.594 77.0 651470.0 25 0 77260.0 27615 PLFFLKWR 8 89 553.8302735297617 1105.645994126323 2 553.8312866091728 MULTI CID FTMS 0 0 0 13290 347958.59375 0.3051483746777829 -3 0.3232498168945312 13 Unmodified _PLFFLKWR_ ENST00000369063.7_1_6:107077156-107077285:-|nuORF 2.889219685676258 0.8067950007271085 4 [QA]C 3 8 17.083 0.0 0.0 1.545 0.0 0.0 0.0 800.5171848824358 800.5171848824358 10.092871534590774 0.0 0.0 0.0 0 0.0 0.638272163982407 0.0 0.3252574989159953 [QA]C 1.545 - 20 1 1.082 43602.2 1.0 8489 4812 13290 HBL1_DMSO_200M_050219_2,13303 HBL1_DMSO_200M_050219_2,13303,PLFFLKWR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13304 70.597 136.0 673070.0 25 0 75553.0 + 25044 MPTLPPPSV 9 116 469.7542392154372 937.4939254976744 2 469.7542907595634 MULTI CID FTMS 0 0 0 13290 312409.5625 0.2716640621034255 22 -2.239906311035156 14 Unmodified _MPTLPPPSV_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 61.357469665136826 0.0253304979873734 4 [{I|L}P]TMPP 6 5 50.364 0.0 0.0 5.3722 0.0 0.0 0.0 298.1419717225369 298.1419717225369 19.424682829810465 0.0 0.0 0.0 0 1.055462187404089 2.0 0.5451140161145328 0.0 [{I|L}P]TMPP 5.3722 - 411 1 1.082 73361.3 1.0 8490 4812 13290 HBL1_DMSO_200M_050219_2,13304 HBL1_DMSO_200M_050219_2,13304,MPTLPPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13305 70.602 273.0 482010.0 25 0 46508.0 + 18288 KVIPVYVGV 9 160 487.3080163859671 972.601479838734 2 487.3078491091728 MULTI CID FTMS 0 0 0 13290 254330.96875 1.0 0 0.0 15 Unmodified _KVIPVYVGV_ ENSG00000001631|ENST00000394505|KRIT1;ENST00000475770.5_1_7:91830052-91864980:-|nuORF;ENST00000486261.5_1_7:91830052-91864980:-|nuORF;nc|ENSG00000001631|O00522-2|KRIT1;nc|ENSG00000001631|O00522-3|KRIT1 34.10243960390752 0.1078313939113124 4 [YV]PV{I|L}KVR 8 6 + 59.435 0.0 0.0 6.1109 6.1109 78.097 0.0 0.0 0.0 7.403626894942441 7.074484699911565 7.074484699911565 3.0102999566398125 0 0.6861818737241735 1.3979400086720375 0.0 0.0 [YV]PV{I|L}KVR;[YV]PVK{I|L}VR;[VP]YV{I|L}KVR;[VP]YVK{I|L}VR;[{I|L}V]{M(Oxidation (M))|F}V{I|L}KVR;[{I|L}V]{M(Oxidation (M))|F}VK{I|L}VR;[{I|L}V]K[VP]YVR;[YV][K{I|L}]VPVR;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[VP]YVR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}T]{I|L}KVR 6.1109;5.8014;5.3497;5.0402;3.7107;3.4012;2.9789;2.8773;2.7965;2.2781 -;-;-;-;-;-;-;-;-;- 805 1 1.082 100415.3 1.0 8491 4812 13290 HBL1_DMSO_200M_050219_2,13305 HBL1_DMSO_200M_050219_2,13305,KVIPVYVGV True True KVIPVYVGV 70.602174 487.3104 2250823.75 13290.0 nc|ENSG00000001631|O00522-3|KRIT1;;ENSG00000001631|ENST00000394505|KRIT1;;ENST00000486261.5_1_7:91830052-91864980:-|nuORF;;nc|ENSG00000001631|O00522-2|KRIT1;;ENST00000475770.5_1_7:91830052-91864980:-|nuORF 7.19547700881958 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13306 70.608 319.0 629540.0 25 0 85107.0 + -1 DALENLRV 8 184 465.2584818192503 464.2512053526503 1 465.2575866580009 MULTI CID FTMS 0 0 0 13290 193279.75 0.4524561794435382 6 -0.5181427001953125 16 ENSG00000142867|ENST00000648566|BCL10 4 {[DA]|[EG]}{I|L} 3 -1 19.434 0.0 0.0 4.1862 0.0 0.0 0.0 162.08025133337216 162.08025133337216 5.939549404436388 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.064909327626439 0.0 {[DA]|[EG]}{I|L} 4.1862 - 111 1 1.082 153495.2 1.0 8492 4812 13290 HBL1_DMSO_200M_050219_2,13306 HBL1_DMSO_200M_050219_2,13306, False False DALENLRV 70.607978 465.257586658001 1456250.25 13290.0 ENSG00000142867|ENST00000648566|BCL10 3.5479141076405845 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13307 70.619 660.0 427680.0 25 0 35339.0 + 32023 RVIEGDVVSAL 11 214 579.3302478418418 1156.6459427504835 2 579.3298828005791 MULTI CID FTMS 0 0 0 13290 193128.75 0.019630763810692 -3 0.3232498168945312 17 Unmodified _RVIEGDVVSAL_ ENSG00000169756|ENST00000544547|LIMS1;ENSG00000256671|ENST00000632897|LIMS4;ENSG00000256977|ENST00000480744|LIMS3;ENST00000603767.1_1_2:111195993-111209584:-|nuORF;nc|ENSG00000169756|P48059-3|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059|LIMS1 64.9267550582149 0.0491502274424461 4 {[QN]|[E{I|L}]|[KN]}[RV]GDVVSA{I|L} 11 4 + 78.764 0.0 0.0 6.8097 6.8097 77.774 0.0 0.0 0.0 1.4693303031446732 16.575773191777927 1.4693303031446732 1.4693303031446732 0 1.6549471895720984 1.154901959985743 1.1549471895720984 0.7134679910804405 {[QN]|[E{I|L}]|[KN]}[RV]GDVVSA{I|L};[{I|L}A]G[KQ]GDVVSA{I|L};{[VA]|[{I|L}G]}A[KQ]GDVVSA{I|L};[Q{I|L}][KQ]GDVVSA{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]GDVVSA{I|L};{[QN]|[E{I|L}]|[KN]}[RV]GDVVGT{I|L};{[SA]|[TG]}G[QT][KP]VVSA{I|L};[{I|L}A]G[KQ]GDVVGT{I|L};{[VA]|[{I|L}G]}A[KQ]GDVVGT{I|L};{[QN]|[E{I|L}]|[KN]}RRDVWA{I|L} 6.8097;6.6827;6.5305;6.3318;6.3243;5.6662;5.5911;5.5391;5.3869;5.2442 -;-;-;-;-;-;-;-;-;- 3077 1 1.082 213841.8 1.0 8493 4812 13290 HBL1_DMSO_200M_050219_2,13307 HBL1_DMSO_200M_050219_2,13307,RVIEGDVVSAL True True RVIEGDVVSAL 70.619482 579.3311 183465708.0 13290.0 ENSG00000169756|ENST00000544547|LIMS1;;nc|ENSG00000169756|P48059-5|LIMS1;;ENST00000603767.1_1_2:111195993-111209584:-|nuORF;;nc|ENSG00000169756|P48059-3|LIMS1;;nc|ENSG00000169756|P48059-4|LIMS1;;ENSG00000256977|ENST00000480744|LIMS3;;ENSG00000256671|ENST00000632897|LIMS4;;nc|ENSG00000169756|P48059|LIMS1 7.525459289550781 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13308 70.633 800.0 271770.0 25 0 22320.0 + + 40010 KLGDIMGV 8 202 416.7335945463332 831.4526361594665 2 416.7334777712822 MULTI CID FTMS 0 0 0 13290 186362.78125 0.7482438516457864 -1 0.0968399047851562 18 Unmodified _VGEKLMGV_ ENSG00000140829|ENST00000268482|DHX38;ENST00000566329.1_1_16:72134993-72137705:+|nuORF 54.773552608820026 0.1167943196628344 4 [VG]EK{I|L}MGV 8 -1 + 74.51 0.0 0.0 8.9614 8.9614 90.977 0.0 0.0 0.0 12.21848749616356 10.216977436784164 10.216977436784164 7.512262311882765 0 1.2302046884880935 1.6989700043360187 0.9634679910804403 0.0 [VG]EK{I|L}MGV;[VG]E{I|L}KMGV;[VG]EKM{I|L}GV;[K{I|L}]GD{I|L}MGV;{NN|[MP]|[D{I|L}]|[EV]}GK{I|L}MGV;[K{I|L}]ERMGV;[VG][{I|L}T]RMGV;{NN|[MP]|[D{I|L}]|[EV]}G{I|L}KMGV;[K{I|L}]GDM{I|L}GV;{NN|[MP]|[D{I|L}]|[EV]}GKM{I|L}GV 8.9614;8.0579;7.9874;7.4919;7.4303;6.7278;6.5966;6.5268;6.5178;6.4563 +;-;-;-;-;-;-;-;-;- + 777 1 1.082 168148.4 0.9100000262260436 8494 4812 13290 HBL1_DMSO_200M_050219_2,13308 HBL1_DMSO_200M_050219_2,13308,VGEKLMGV False False KLGDIMGV 70.633297 416.733477771282 2087116.875 13290.0 ENSG00000140829|ENST00000268482|DHX38;;ENST00000566329.1_1_16:72134993-72137705:+|nuORF 5.810643355051677 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13309 70.646 755.0 151410.0 25 0 25990.0 -1 0 78 1011.7242325259124 3032.150868177937 3 1012.055957019329 MULTI CID FTMS 0 0 0 13290 184196.40625 1.0 0 0.0 19 4 W 1 -1 6.9897 0.0 0.0 0.23052 0.0 0.0 2020.589480093756 822.4554966573356 2843.044976751092 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.23052 - 93 + 1 1.082 107865.9 1.0 8495 4812 13290 HBL1_DMSO_200M_050219_2,13309 HBL1_DMSO_200M_050219_2,13309, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13310 70.662 800.0 108230.0 25 0 17618.0 -1 0 63 1119.110760332583 3354.3104515979485 3 1120.114184558392 MULTI CID FTMS 0 0 0 13290 172046.125 1.0 0 0.0 20 4 VH 2 -1 7.9588 0.0 0.0 0.23727 0.0 0.0 2346.836343787205 768.3189333337855 3115.1552771209904 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VH 0.23727 - 164 + 1 1.082 75628.3 0.9800000190734864 8496 4812 13290 HBL1_DMSO_200M_050219_2,13310 HBL1_DMSO_200M_050219_2,13310, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13312 70.676 715.0 149860.0 25 0 24096.0 -1 0 98 987.133137230533 2958.3775822917987 3 987.4677001833916 MULTI CID FTMS 0 0 0 13311 128951.203125 0.5243086731781527 2 -0.1844940185546875 1 4 [NP]{I|L}N{M(Oxidation (M))|F}G{I|L}NHYNG 12 -1 20.563 0.0 0.0 0.69509 0.0 0.0 0.0 1614.7078794932238 1614.7078794932238 4.365582735583754 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [NP]{I|L}N{M(Oxidation (M))|F}G{I|L}NHYNG 0.69509 - 1178 1 1.082 81052.4 1.0 8497 4813 13311 HBL1_DMSO_200M_050219_2,13312 HBL1_DMSO_200M_050219_2,13312, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13313 70.677 4.5 19069000.0 25 0 2159400.0 + 17831 KQLDDLKVEL 10 109 600.8453419844042 1199.6761310356085 2 600.8459350466728 MULTI CID FTMS 0 0 0 13311 16066680.0 0.0597854904337142 -2 0.191741943359375 2 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 132.21981990298983 0.000211757561217 4 {NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}KVNK 10 6 + 89.281 0.0 0.0 7.4421 7.4421 77.037 0.0 0.0 0.0 1.8837094505904872 43.17455234239091 1.8837094505904872 0.1278813061184536 0 1.110924374808178 1.154901959985743 1.0994850021680094 1.0044321917401078 {NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}KVNK;{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}VKNK;{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVNK;{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}VKNK;[AG]K{I|L}DD{I|L}KVNK;[AG]K{I|L}DD{I|L}VKNK;{NN|[MP]|[D{I|L}]|[EV]}QDK{I|L}KVNK;{NN|[MP]|[D{I|L}]|[EV]}QDK{I|L}VKNK;{NN|[MP]|[D{I|L}]|[EV]}QKD{I|L}KVNK;{NN|[MP]|[D{I|L}]|[EV]}QKD{I|L}VKNK 7.4421;7.4314;7.1545;7.1438;7.0492;7.0385;6.8594;6.8488;6.8227;6.8121 -;-;-;-;-;-;-;-;-;- 5738 1 1.082 66601.6 1.0 8498 4813 13311 HBL1_DMSO_200M_050219_2,13313 HBL1_DMSO_200M_050219_2,13313,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13314 70.679 7.3 14663000.0 25 0 2056600.0 + 17841 KQLDDLKVEL 10 116 400.8994449725738 1199.6765055179214 3 400.8994323611259 MULTI CID FTMS 0 0 0 13311 9501252.0 0.0647319002661643 -2 0.191741943359375 3 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 74.7717668357584 0.0187829169580365 4 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L} 10 4 + 79.593 0.0 0.0 6.6346 6.6346 86.611 0.0 0.0 0.0 8.666805048557848 3.221740651475642 3.221740651475642 8.666805048557848 0 0.7429928190999391 1.3010299956639813 1.8243923658886183 1.055462187404089 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L};[KQ]{I|L}DD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]D{I|L}KVE{I|L};[Q{I|L}]KDD{I|L}KVE{I|L};[K{I|L}]QDD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}DQKVE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EQD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}EE{I|L}KVE{I|L};[K{I|L}]DQD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVE{I|L} 6.6346;5.9121;5.8707;5.5362;5.5167;5.0232;4.9675;4.9607;4.9014;4.8947 -;+;-;-;-;-;-;-;-;- + 3192 1 1.082 85394.9 1.0 8499 4813 13311 HBL1_DMSO_200M_050219_2,13314 HBL1_DMSO_200M_050219_2,13314,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13315 70.68 58.0 1242200.0 25 0 176800.0 + 34979 SQLPPLREI 9 86 526.808523502413 1051.602494071626 2 526.8088256716728 MULTI CID FTMS 0 0 0 13311 698729.0625 1.0 0 0.0 4 Unmodified _SQLPPLREI_ ENSG00000082641|ENST00000362042|NFE2L1;nc|ENSG00000082641|Q14494-2|NFE2L1 32.78568957990786 0.1150597335874693 4 {[QS]|[NT]}{I|L}PTP 6 5 36.313 0.0 0.0 3.4531 0.0 0.0 0.0 425.2559113902384 425.2559113902384 24.892942590157343 0.0 0.0 0.0 0 1.3935078169319297 0.8860566476931632 0.3494850021680094 0.2742275032520141 {[QS]|[NT]}{I|L}PTP 3.4531 - 158 1 1.082 63100.1 1.0 8500 4813 13311 HBL1_DMSO_200M_050219_2,13315 HBL1_DMSO_200M_050219_2,13315,SQLPPLREI True True SQLPPLREI 70.680025 526.8091 6125381.0 13311.0 nc|ENSG00000082641|Q14494-2|NFE2L1;;ENSG00000082641|ENST00000362042|NFE2L1 2.903417388598124 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13316 70.683 147.0 700400.0 25 0 59900.0 + -1 SIIVCALFLSA 11 88 597.3309619750243 1192.6473710168484 2 597.3307983279228 MULTI CID FTMS 0 0 0 13311 638105.0 0.2487803532509082 -2 0.191741943359375 5 Carbamidomethyl (C) _SIIVC(Carbamidomethyl (C))ALFLSA_ REV__ENSG00000124067|ENST00000316341|SLC12A4;REV__ENST00000573023.6_1_16:67984709-67996179:-|nuORF;REV__nc|ENSG00000124067|Q9UP95-2|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-3|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-4|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-5|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-6|SLC12A4;REV__nc|ENSG00000124067|Q9UP95-7|SLC12A4 32.78568957990786 0.3235288296534633 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}A[QP]{I|L}{M(Oxidation (M))|F}VTA 11 -1 + 87.727 0.0 0.0 7.3557 7.3557 91.911 0.0 0.0 0.0 13.30971062290122 73.91496412826197 13.30971062290122 10.752574989159967 0 1.274227503252014 1.0969100130080565 1.1549471895720984 0.3494850021680094 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}A[QP]{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}A{M(Oxidation (M))|F}[QP]{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}A[RD]T{I|L}{M(Oxidation (M))|F}VTA;[{M(Oxidation (M))|F}V]TA[QP]{I|L}{M(Oxidation (M))|F}VTA;[TA]V{M(Oxidation (M))|F}[QP]{I|L}{M(Oxidation (M))|F}VTA;[TA]V[RD]T{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}[K{I|L}][WE]{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}[K{I|L}]{[WT]|[RM]}{M(Oxidation (M))|F}VEA 7.3557;6.4541;6.3065;5.9798;5.7391;5.5914;4.7316;2.6499 -;-;-;-;-;-;-;- 247 1 1.082 84452.1 1.0 8501 4813 13311 HBL1_DMSO_200M_050219_2,13316 HBL1_DMSO_200M_050219_2,13316,SIIVCALFLSA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13317 70.684 53.0 1453700.0 25 0 209380.0 + + 34674 HVLDDFVKV 9 121 536.2977239627774 1070.5808949923546 2 536.2950317263603 MULTI CID FTMS 0 0 0 13311 607016.625 0.3935196638967347 -2 0.191741943359375 6 Unmodified _SPRNKENKV_ nc|ENSG00000134452|Q8NFZ0-2|FBH1;ENSG00000134452|ENST00000362091|FBH1 18.1463463914782 0.3454829746528889 4 {NN|[MP]|[D{I|L}]|[EV]}D{M(Oxidation (M))|F}VHVKV 9 -1 + 48.33 0.0 0.0 4.5144 4.5144 65.863 0.0 0.0 0.0 0.0316073096547597 16.478174818886373 0.0316073096547597 0.0316073096547597 0 0.5 1.154901959985743 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}D{M(Oxidation (M))|F}VHVKV;[HV][HC]{I|L}HVKV;{NN|[MP]|[D{I|L}]|[EV]}D[HV]{M(Oxidation (M))|F}VKV;{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))C]VHVKV;{NN|[MP]|[D{I|L}]|[EV]}[KQ]D[EP]KV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QQVHVKV;{[QV]|[N{I|L}]|[RA]|[KV]}AADD[EP]KV;[QA][YQ]VHVKV;{[HG]|PP}[WR][CS]VKV;[QA][YN]{I|L}HVKV 4.5144;4.5114;4.3786;2.6444;2.5819;2.4372;2.2526;2.156;2.1197;2.0393 -;-;-;-;-;-;-;-;-;- 303 1 1.082 67348.1 1.0 8502 4813 13311 HBL1_DMSO_200M_050219_2,13317 HBL1_DMSO_200M_050219_2,13317,SPRNKENKV False False HVLDDFVKV 70.684363 536.29503172636 6978642.0 13311.0 nc|ENSG00000134452|Q8NFZ0-2|FBH1;;ENSG00000134452|ENST00000362091|FBH1 3.6505704720815024 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13318 70.693 505.0 447800.0 25 0 40921.0 -1 0 68 1152.132402724405 3453.375378773415 3 1153.134082019329 MULTI CID FTMS 0 0 0 13311 561604.75 0.6885865160151182 -1 0.0949020385742187 7 4 E 1 -1 8.2268 0.0 0.0 0.23823 0.0 0.0 2935.241059255829 386.0679604423855 3321.3090196982143 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E 0.23823 - 30 + 1 1.082 156993.7 1.0 8503 4813 13311 HBL1_DMSO_200M_050219_2,13318 HBL1_DMSO_200M_050219_2,13318, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13319 70.696 156.0 733700.0 25 0 47821.0 + 32321 RYIPDAMNL 9 125 546.7786546880582 1091.5427564429162 2 546.7797119021416 MULTI CID FTMS 0 0 0 13311 498224.75 0.3278604891965892 -2 0.191741943359375 8 Unmodified _RYIPDAMNL_ ENSG00000138095|ENST00000260665|LRPPRC 29.43715596616401 0.1566398223704148 4 [YR]{I|L}[DP]AMN{I|L} 9 0 + 45.225 0.0 0.0 4.1432 4.1432 78.157 0.0 0.0 0.0 6.417002536801313 23.658197815704085 6.417002536801313 9.208187539523747 0 0.805462187404089 0.0 0.3252574989159953 0.3494850021680094 + + [YR]{I|L}[DP]AMN{I|L};[YR]{I|L}[DP]AMGG{I|L};{[TV]|[{I|L}S]}{[ES]|[DT]|[{I|L}C]}[W{I|L}]MN{I|L};[{I|L}T]{[DS]|[MA]|[CV]|TT}[W{I|L}]MN{I|L};[VS]{[ET]|[MV]}[W{I|L}]MN{I|L};{[DS]|[MA]|[CV]|TT}[{I|L}T][W{I|L}]MN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V[WD][W{M(Oxidation (M))|F}]{I|L} 4.1432;3.2996;2.3722;2.338;1.8745;1.7695;0.90582 +;-;-;-;-;-;- + 362 1 1.082 91544.2 1.0 8504 4813 13311 HBL1_DMSO_200M_050219_2,13319 HBL1_DMSO_200M_050219_2,13319,RYIPDAMNL False True RYIPDAMNL 70.696404 546.779711902142 9550545.0 13311.0 ENSG00000138095|ENST00000260665|LRPPRC 6.744736353556315 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13320 70.707 628.0 466700.0 25 0 128230.0 -1 0 77 1157.4562867255663 3469.3470307769 3 1157.791064441204 MULTI CID FTMS 0 0 0 13311 382789.65625 0.9405744895754324 -1 0.0949020385742187 9 4 C(Carbamidomethyl (C)) 1 -1 5.4846 0.0 0.0 0.15809 0.0 0.0 1153.4066086951118 2152.8715781420487 3306.2781868371603 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.15809 - 16 + 1 1.082 189268.3 1.0 8505 4813 13311 HBL1_DMSO_200M_050219_2,13320 HBL1_DMSO_200M_050219_2,13320, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13321 70.717 554.0 390310.0 25 0 36678.0 + 27061 VTLDVQIQHV 10 198 575.8430924310968 1149.6716319289935 2 575.8428222537041 MULTI CID FTMS 0 0 0 13311 263857.78125 0.6797901401454189 2 -0.1844940185546875 10 Unmodified _PERQIPVRR_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B 15.847184025352805 0.4077185912009129 4 T{I|L}DVQ{I|L}QHV 9 8 58.427 0.0 0.0 5.0821 0.0 0.0 98.10301134026128 0.0 98.10301134026128 0.0 44.26940758674228 0.0 0.0 0 0.0 0.0 0.3494850021680094 1.2059771852360797 T{I|L}DVQ{I|L}QHV 5.0821 - 1811 + 1 1.082 168077.4 1.0 8506 4813 13311 HBL1_DMSO_200M_050219_2,13321 HBL1_DMSO_200M_050219_2,13321,PERQIPVRR False False VTLDVQIQHV 70.71715 575.842822253704 1916316.125 13311.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 8.216774463653564 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13322 70.722 288.0 575390.0 25 0 42192.0 + 6101 DSRPQPLD 8 151 464.2320571395216 926.4495613458432 2 464.2321349978447 MULTI CID FTMS 0 0 0 13311 269693.9375 0.3688848641647039 -2 0.191741943359375 11 Unmodified _DSRPQPLD_ ENSG00000165671|ENST00000439151|NSD1;nc|ENSG00000165671|Q96L73-2|NSD1;nc|ENSG00000165671|Q96L73-3|NSD1 32.30548876998284 0.3644845974844379 4 [TA]WPQPEV 8 5 + 47.935 0.0 0.0 5.174 5.174 76.449 0.0 0.0 0.0 14.98236241655944 5.118833609788752 5.118833609788752 4.313637641589871 0 1.2619229975844686 1.5228787452803376 0.9731975075880328 0.0 [TA]WPQPEV;[TA]WPGAPEV;[TA]WPQEPV;[TA]WPQPD{I|L};[TA]WPGAEPV;[TA]WPGAPD{I|L};[TA]WPQEVP;[TA]WPGAEVP;{[QN]|[E{I|L}]|[KN]}TQPWGP;{[QN]|[E{I|L}]|[KN]}TAGPWGP 5.174;4.7084;4.6738;4.6215;4.2082;4.1559;3.5392;3.0736;2.9534;2.4878 -;-;-;-;-;-;-;-;-;- 666 + 1 1.082 129429.9 1.0 8507 4813 13311 HBL1_DMSO_200M_050219_2,13322 HBL1_DMSO_200M_050219_2,13322,DSRPQPLD False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13323 70.727 216.0 553440.0 25 0 59385.0 3369 AYQDRLAYL 9 128 556.7912393493963 1111.5679257655925 2 556.7905761599541 MULTI CID FTMS 0 0 0 13311 260702.625 1.0 0 0.0 12 Unmodified _AYQDRLAYL_ ENSG00000140575|ENST00000268182|IQGAP1;ENST00000558003.1_1_15:91016937-91017036:+|nuORF 36.506200033944 0.094635877243972 4 {[TV]|[{I|L}S]}[RV]T[YG]TC{I|L} 10 8 + 31.714 0.0 0.0 2.8531 2.8531 70.489 0.0 0.0 0.0 1.6522478729376289 6.202099029770647 1.6522478729376289 5.779550148593483 0 0.6747425010840047 0.8860566476931632 0.0 0.3252574989159953 {[TV]|[{I|L}S]}[RV]T[YG]TC{I|L};{[TV]|[{I|L}S]}[RV]T{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y{I|L};{[TV]|[{I|L}S]}[RV]T[CS]AY{I|L};{[DA]|[EG]}RYQ{I|L}AY{I|L};{[DA]|[EG]}R[{M(Oxidation (M))|F}E]KAY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}AY{I|L};{NN|[MP]|[D{I|L}]|[EV]}YY{I|L}{I|L}PC{I|L};{[DA]|[EG]}R[DP]{I|L}{I|L}PC{I|L};{NN|[MP]|[D{I|L}]|[EV]}YY{I|L}{I|L}AE{I|L};{[DA]|[EG]}R[DP]{I|L}{I|L}AE{I|L} 2.8531;2.3331;2.292;2.2871;1.8408;1.7356;1.6175;1.3126;1.3071;1.0022 -;-;-;-;-;-;-;-;-;- 385 1 1.082 95630.7 1.0 8508 4813 13311 HBL1_DMSO_200M_050219_2,13323 HBL1_DMSO_200M_050219_2,13323,AYQDRLAYL True True YFPDARDMV 70.726529 556.790576159954 4432600.5 13311.0 ENSG00000100350|ENST00000397224|FOXRED2 2.4736862182617188 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13324 70.732 253.0 442810.0 25 0 66908.0 + 33272 SFPEHRVLSF 10 102 406.8803303792884 1217.619161738065 3 406.8801452517509 MULTI CID FTMS 0 0 0 13311 253762.75 0.8050146322893783 -2 0.191741943359375 13 Unmodified _SFPEHRVLSF_ ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2 40.23920728925047 0.1550410903091231 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[RE]|[WV]}V{I|L}S{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 10 4 + 58.478 0.0 0.0 4.8027 4.8027 66.995 0.0 0.0 0.0 0.0514997831990626 8.507112333562858 0.0514997831990626 0.0514997831990626 0 1.1989700043360187 2.0 0.7614393726401688 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[RE]|[WV]}V{I|L}S{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}SV[K{I|L}]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]AV{I|L}S{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PEH[{I|L}T][K{I|L}]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}SV[K{I|L}]{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M{I|L}V{I|L}S{M(Oxidation (M))|F}S{M(Oxidation (M))|F};[EP][RH]V{I|L}S{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[RE]|[WV]}V{I|L}HPS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]AV{I|L}HPS{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}GM{I|L}V{I|L}S{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 4.8027;4.7984;4.6486;4.5774;4.5302;4.4239;4.0652;3.9955;3.8415;3.7163 -;-;-;-;-;-;-;-;-;- 772 1 1.082 94183.5 1.0 8509 4813 13311 HBL1_DMSO_200M_050219_2,13324 HBL1_DMSO_200M_050219_2,13324,SFPEHRVLSF False True SFPEHRVLSF 70.732404 406.880145251751 13201935.0 13311.0 nc|ENSG00000164823|Q9Y236|OSGIN2;;ENSG00000164823|ENST00000451899|OSGIN2 5.3809814453125 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13325 70.744 693.0 260760.0 25 0 52818.0 + 5803 DPPVLPTV 8 113 837.47249028869 836.4652138220899 1 837.4747192263603 MULTI CID FTMS 0 0 0 13311 193380.984375 0.8171379072317042 1 -0.1381683349609375 14 Unmodified _DPPVLPTV_ ENSG00000149016|ENST00000476907|TUT1;ENST00000463241.2_1_11:62344075-62344783:-|nuORF;ENST00000469480.1_1_11:62344316-62344720:-|nuORF;ENST00000526409.5_1_11:62342279-62344783:-|nuORF 88.90359156742426 0.0528693370567628 4 [DP]PV{I|L}PTV 8 0 + 81.839 0.0 0.0 9.7839 9.7839 96.564 0.0 0.0 0.0 14.364916417530608 14.364916417530608 14.364916417530608 14.364916417530608 0 1.6989700043360187 1.3979400086720375 0.8754223615525999 0.0 + + [DP]PV{I|L}PTV;DPPV{I|L}PTV;[VP]PD{I|L}PTV;[DP][{I|L}V]PPTV;[VP]{I|L}DPPTV;[VP]{I|L}PDPTV;[VP]P{I|L}DPTV;[{I|L}P]VDPPTV;[{I|L}P]VPDPTV;[DP]PV[KG][KP] 9.7839;8.0666;7.3191;6.382;6.0495;5.9283;5.6631;5.6096;5.4884;4.8553 +;+;-;-;-;-;-;-;-;- + 410 1 1.082 125213.0 1.0 8510 4813 13311 HBL1_DMSO_200M_050219_2,13325 HBL1_DMSO_200M_050219_2,13325,DPPVLPTV True True DPPVLPTV 70.744463 837.47471922636 3753842.75 13311.0 ENST00000463241.2_1_11:62344075-62344783:-|nuORF;;ENST00000526409.5_1_11:62342279-62344783:-|nuORF;;ENSG00000149016|ENST00000476907|TUT1;;ENST00000469480.1_1_11:62344316-62344720:-|nuORF 8.262305736541748 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13326 70.756 682.0 243400.0 25 0 44004.0 -1 0 131 682.947750975339 2045.821423526217 3 683.2823974490166 MULTI CID FTMS 0 0 0 13311 162021.203125 0.7955946794509857 1 -0.1381683349609375 15 4 {NN|[MP]|[D{I|L}]|[EV]}D{I|L}KV 6 -1 25.076 0.0 0.0 1.2257 0.0 0.0 0.0 1359.411974633892 1359.411974633892 3.669438958974631 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.6694451763165201 0.0 {NN|[MP]|[D{I|L}]|[EV]}D{I|L}KV 1.2257 - 2501 1 1.082 137267.9 1.0 8511 4813 13311 HBL1_DMSO_200M_050219_2,13326 HBL1_DMSO_200M_050219_2,13326, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13327 70.77 800.0 178720.0 25 0 21284.0 -1 0 89 1162.1108455333326 3483.310707200198 3 1163.115649402142 MULTI CID FTMS 0 0 0 13311 168621.046875 0.7531704459373276 -2 0.191741943359375 16 4 EY 2 -1 10.969 0.0 0.0 0.3149 0.0 0.0 2773.1613674558607 415.0231475063673 3188.184514962228 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EY 0.3149 - 34 + 1 1.082 99496.6 0.9399999976158142 8512 4813 13311 HBL1_DMSO_200M_050219_2,13327 HBL1_DMSO_200M_050219_2,13327, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13328 70.774 137.0 594190.0 25 0 57163.0 + 35723 SVHGDFLNV 9 130 494.24858197868105 986.482611024162 2 494.2273742556572 MULTI CID FTMS 0 0 0 13311 93642.65625 0.1842096333308867 -2 0.191741943359375 17 Unmodified _SVHGDFLNV_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 46.020951573049366 0.0490941689151868 4 [VS]HGD{M(Oxidation (M))|F}{I|L}NV 9 0 + 48.89 0.0 0.0 4.956 4.956 84.802 0.0 0.0 0.0 6.588128661901003 33.405169745920915 6.588128661901003 19.69273760456403 0 1.079689690656103 0.585026652029182 1.1564045754872794 0.0 + + [VS]HGD{M(Oxidation (M))|F}{I|L}NV;[VS]HGD{M(Oxidation (M))|F}AA[{I|L}A];[TA][HA]D{M(Oxidation (M))|F}{I|L}NV;{[HG]|PP}[VS]D{M(Oxidation (M))|F}{I|L}NV;[DV]{[ET]|[MV]}[TP]{I|L}NV;[{I|L}T]DD[TP]{I|L}NV;{[HG]|PP}D[VS]{M(Oxidation (M))|F}{I|L}NV;[VS]HG{I|L}{[{M(Oxidation (M))|F}D]|MM}NV;[KC]{I|L}[TP]DDPV;{[HG]|PP}D{M(Oxidation (M))|F}[VS]{I|L}NV 4.956;2.9597;2.6088;2.4722;2.171;2.1327;2.0863;2.0388;1.5495;1.1708 +;-;-;-;-;-;-;-;-;- + 499 1 1.082 67879.3 1.0 8513 4813 13311 HBL1_DMSO_200M_050219_2,13328 HBL1_DMSO_200M_050219_2,13328,SVHGDFLNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13329 70.776 97.0 1183200.0 25 0 263300.0 + 12032 GQAKKRPA 8 114 428.26170747282816 854.5088620124563 2 428.2616149783134 MULTI CID FTMS 0 0 0 13311 146980.078125 0.0209739508356755 -4 0.41815185546875 18 Unmodified _GQAKKRPA_ REV__ENSG00000183955|ENST00000402868|KMT5A;REV__ENST00000413684.1_1_2:91935968-91936997:-|nuORF;REV__ENST00000437519.5_1_12:123868737-123892247:+|nuORF;REV__nc|ENSG00000183955|Q9NQR1|KMT5A 2.577480529830294 0.808687252328423 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 8 1 1.082 96135.0 1.0 8514 4813 13311 HBL1_DMSO_200M_050219_2,13329 HBL1_DMSO_200M_050219_2,13329,GQAKKRPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13330 70.789 760.0 133200.0 25 0 29892.0 -1 0 54 1177.843655385595 3530.509136756985 3 1178.513354480267 MULTI CID FTMS 0 0 0 13311 132170.75 0.7363565907870813 -1 0.0949020385742187 19 4 VK{I|L} 3 -1 10.802 0.0 0.0 0.30596 0.0 0.0 2590.9732613681163 596.2692354791624 3187.2424968472787 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VK{I|L} 0.30596 - 42 + 1 1.082 80948.0 1.0 8515 4813 13311 HBL1_DMSO_200M_050219_2,13330 HBL1_DMSO_200M_050219_2,13330, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13331 70.8 611.0 147190.0 25 0 11369.0 + + 7607 VPYQGPSSDYVVV 13 131 705.3514026058011 1408.6882522784022 2 705.3509399294853 MULTI CID FTMS 0 0 0 13311 137889.25 0.595562800310897 -1 0.0949020385742187 20 Unmodified _EIQRHNLQAWD_ ENSG00000137642|ENST00000260197|SORL1 5.296884461304476 0.8501568894076437 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVSM[QP]YVVV 12 -1 + 54.568 0.0 0.0 3.8737 3.8737 65.596 0.0 0.0 0.0 5.923001540388064 8.778871405390667 5.923001540388064 1.1394335230683623 0 0.6331596456423735 0.8860566476931632 1.305462187404089 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVSM[QP]YVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AGVSM[QP]YVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVSMV[CS]VVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AGVSMV[CS]VVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVSMV{[C(Carbamidomethyl (C))E]|[WC]}VVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AGVSMV{[C(Carbamidomethyl (C))E]|[WC]}VVV;{[TV]|[{I|L}S]}MGVSM[QP]YVVV;[Q{I|L}]{M(Oxidation (M))|F}VSM[QP]YVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVS[PG]{[DS]|[MA]|[CV]|TT}YVVV;{[TV]|[{I|L}S]}MGVSMV[CS]VVVV 3.8737;3.7928;3.7362;3.6572;3.6034;3.5225;3.4532;3.4259;3.3853;3.3176 -;-;-;-;-;-;-;-;-;- 4069 1 1.082 69899.3 1.0 8516 4813 13311 HBL1_DMSO_200M_050219_2,13331 HBL1_DMSO_200M_050219_2,13331,EIQRHNLQAWD False False VPYQGPSSDYVVV 70.800125 705.350939929485 2288820.0 13311.0 ENSG00000137642|ENST00000260197|SORL1 6.946608543395996 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13333 70.804 1.7 30411000.0 25 0 2339600.0 + 21780 LPNAVITRI 9 84 498.8138193580857 995.6130857829714 2 498.8144103884697 MULTI CID FTMS 0 0 0 13332 32879294.0 0.66076601467543 3 -0.2096328735351562 1 Unmodified _LPNAVITRI_ ENSG00000148229|ENST00000374171|POLE3;ENST00000479871.1_1_9:116172333-116172573:-|nuORF 32.037481411007896 0.1235546156350648 4 {I|L}PNAV{I|L} 6 3 75.438 0.0 0.0 7.5771 0.0 0.0 0.0 385.2206209772094 385.2206209772094 45.389180660303694 0.0 0.0 0.0 0 1.4291746928241125 1.6989700043360187 0.0 0.0 + {I|L}PNAV{I|L} 7.5771 + + 82 + 1 1.077 48650.5 1.0 8517 4814 13332 HBL1_DMSO_200M_050219_2,13333 HBL1_DMSO_200M_050219_2,13333,LPNAVITRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13334 70.805 2.5 21213000.0 25 0 3487500.0 + 9115 FFPDKPITQY 10 55 628.3213562907354 1254.6281596482706 2 628.3224365115166 MULTI CID FTMS 0 0 0 13332 23765944.0 0.990015920439957 -1 0.1381683349609375 2 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 24.99096001346401 0.4071966087057876 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P[DP]T[K{I|L}]QY 10 3 + 31.304 0.0 0.0 2.4951 2.4951 68.886 0.0 0.0 0.0 7.269987279362624 11.639241889763271 7.269987279362624 4.771212547196626 0 0.3807196863200844 0.0 0.3807196863200844 0.3054621874040891 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P[DP]T[K{I|L}]QY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P[DP][K{I|L}]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}P]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P[DP]T[{I|L}P]P[QP];[DP]KV{[HG]|PP}VMP[{M(Oxidation (M))|F}E];[DP]PT[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]}P[{M(Oxidation (M))|F}E];{[QD]|[EN]|[WG]|[KD]|[RS]}PV{[HG]|PP}VMP[Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PMV[RH]P[QP] 2.4951;2.1148;2.0513;1.5674;1.1906;0.97561;0.89735;0.8531 -;-;+;-;-;-;-;- + 214 + 1 1.077 46575.0 1.0 8518 4814 13332 HBL1_DMSO_200M_050219_2,13334 HBL1_DMSO_200M_050219_2,13334,FFPDKPITQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13335 70.807 16.0 14391000.0 25 0 3759000.0 -1 0 50 1144.8079058928845 3431.4018882788537 3 1145.142993152142 MULTI CID FTMS 0 0 0 13332 29038932.0 1.0 0 0.0 3 4 C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}G 4 -1 11.146 0.0 0.0 0.32483 0.0 0.0 1474.5005047958382 1426.6900233320584 2901.190528127897 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))Y{M(Oxidation (M))|F}G 0.32483 - 43 + 1 1.077 190867.6 1.0 8519 4814 13332 HBL1_DMSO_200M_050219_2,13335 HBL1_DMSO_200M_050219_2,13335, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13336 70.808 2.1 24292000.0 25 0 2917900.0 + 13251 HIIENIVAV 9 84 504.2977285637242 1006.5809041942484 2 504.2978393435478 MULTI CID FTMS 0 0 0 13332 22767466.0 0.4806902728960925 -2 0.2330703735351562 4 Unmodified _HIIENIVAV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 28.486842064014134 0.1687311288560894 4 {[VA]|[{I|L}G]}A{NN|[MP]|[D{I|L}]|[EV]}H{I|L}[R{I|L}] 9 7 + 32.966 0.0 0.0 3.2751 3.2751 76.943 0.0 0.0 0.0 10.245681914907372 7.147642715192511 7.147642715192511 10.245681914907372 0 0.0 1.154901959985743 0.0 0.3054621874040891 {[VA]|[{I|L}G]}A{NN|[MP]|[D{I|L}]|[EV]}H{I|L}[R{I|L}];[Q{I|L}]{NN|[MP]|[D{I|L}]|[EV]}H{I|L}[R{I|L}];{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}[R{I|L}] 3.2751;2.2572;1.5628 -;-;- 55 1 1.077 49323.2 1.0 8520 4814 13332 HBL1_DMSO_200M_050219_2,13336 HBL1_DMSO_200M_050219_2,13336,HIIENIVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13337 70.809 9.0 5160600.0 25 0 938450.0 + 25959 NLPDEIYHV 9 68 550.2742398171284 1098.5339267010568 2 550.2742797732353 MULTI CID FTMS 0 0 0 13332 6149387.5 0.7160461072497051 1 -0.04632568359375 5 Unmodified _NLPDEIYHV_ ENSG00000148335|ENST00000372483|NTMT1 28.486842064014134 0.1687311288560894 4 {[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}Y[HV] 9 0 + 57.598 0.0 0.0 5.2431 5.2431 87.22 0.0 0.0 0.0 35.20181229336984 5.944825567400315 5.944825567400315 33.69911285071794 0 0.3494850021680094 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}PDE{I|L}Y[HV];{[QV]|[N{I|L}]|[RA]|[KV]}P[MT][C(Carbamidomethyl (C))K][HV] 5.2431;2.1755 +;- + 150 + 1 1.077 43710.3 1.0 8521 4814 13332 HBL1_DMSO_200M_050219_2,13337 HBL1_DMSO_200M_050219_2,13337,NLPDEIYHV False True NLPDEIYHV 70.808941 550.274279773235 112153480.0 13332.0 ENSG00000148335|ENST00000372483|NTMT1 7.9414364496866865 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13338 70.81 18.0 3525800.0 25 0 267400.0 + 12113 GQIEVVPEV 9 95 485.265874949944 968.517196966688 2 485.2661010622978 MULTI CID FTMS 0 0 0 13332 3593498.25 0.794937582382042 -1 0.1381683349609375 6 Unmodified _GQIEVVPEV_ ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3 53.832793166522166 0.0319663582346103 4 {NN|[MP]|[D{I|L}]|[EV]}QAVV 6 6 40.817 0.0 0.0 4.2144 0.0 0.0 0.0 340.1530361603005 340.1530361603005 11.106902131726798 0.0 0.0 0.0 0 0.8494850021680094 0.9208187539523752 0.2887254899964357 0.6861818737241735 {NN|[MP]|[D{I|L}]|[EV]}QAVV 4.2144 - 524 1 1.077 55534.2 1.0 8522 4814 13332 HBL1_DMSO_200M_050219_2,13338 HBL1_DMSO_200M_050219_2,13338,GQIEVVPEV True True GQIEVVPEV 70.81012 485.266101062298 32348294.0 13332.0 ENSG00000118482|ENST00000262043|PHF3;;nc|ENSG00000118482|Q92576-2|PHF3 5.0763258934021 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13339 70.811 26.0 2249800.0 25 0 293570.0 + 40584 VKPSVPLF 8 80 443.773538906193 885.532524879186 2 443.7734252810478 MULTI CID FTMS 0 0 0 13332 2612252.75 0.1524422984113571 38 -3.791671752929688 7 Unmodified _VKPSVPLF_ REV__ENSG00000165792|ENST00000339374|METTL17;REV__ENST00000555902.6_1_14:21458708-21463066:+|nuORF;REV__nc|ENSG00000165792|Q9H7H0-2|METTL17;REV__nc|ENSG00000165792|Q9H7H0-3|METTL17 25.399314129420983 0.5099049743284904 4 {I|L}PYV 4 -1 50.165 0.0 0.0 5.665 0.0 0.0 0.0 410.2417696588501 410.2417696588501 25.026975159433533 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PYV 5.665 - 269 + 1 1.077 52508.3 1.0 8523 4814 13332 HBL1_DMSO_200M_050219_2,13339 HBL1_DMSO_200M_050219_2,13339,VKPSVPLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13340 70.812 30.0 3031900.0 25 0 431360.0 + 8703 EVKQINPLEI 10 103 394.89620272000144 1181.6667787602044 3 394.8960143923759 MULTI CID FTMS 0 0 0 13332 2312018.25 0.8606951510336822 -1 0.1381683349609375 8 Unmodified _EVKQINPLEI_ REV__ENSG00000102226|ENST00000377107|USP11;REV__ENST00000469080.5_1_X:47092634-47106681:+|nuORF;REV__nc|ENSG00000102226|P51784|USP11 32.89776655970281 0.2325650513667944 4 [KQ]{I|L}DD{I|L}K 7 -1 66.559 0.0 0.0 5.6327 0.0 0.0 0.0 338.1746882663169 338.1746882663169 19.96265184917513 0.0 0.0 0.0 0 1.610924374808178 0.0 1.3494850021680094 1.4604093769761874 [KQ]{I|L}DD{I|L}K 5.6327 - 1769 1 1.077 78780.8 1.0 8524 4814 13332 HBL1_DMSO_200M_050219_2,13340 HBL1_DMSO_200M_050219_2,13340,EVKQINPLEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13341 70.814 30.0 1536600.0 25 0 340310.0 30243 QWTSRKRK 8 72 545.3171335917162 1088.6197142502324 2 545.3173095583916 MULTI CID FTMS 0 0 0 13332 2056244.5 0.7320308637497792 -6 0.6497726440429688 9 Unmodified _QWTSRKRK_ ENST00000275820.3_1_7:156745216-156745255:+|nuORF 0.7936320650641473 0.8195151834710337 4 Q 1 7 0.59593 0.0 0.0 0.054742 0.0 0.0 802.4777597598012 155.06220422916252 957.5399639889636 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Q 0.054742 + + 3 + 1 1.077 40712.6 1.0 8525 4814 13332 HBL1_DMSO_200M_050219_2,13341 HBL1_DMSO_200M_050219_2,13341,QWTSRKRK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13342 70.815 47.0 1241200.0 25 0 231290.0 34608 SPKILITT 8 75 436.77498351251535 871.5354140918307 2 436.7751647830009 MULTI CID FTMS 0 0 0 13332 1502269.375 0.548563542493499 -1 0.1381683349609375 10 Unmodified _SPKILITT_ ENSG00000117133|ENST00000370654|RPF1 0.6903765706972694 0.8201419426409876 4 {I|L} 1 7 11.783 0.0 0.0 1.352 0.0 0.0 740.4405787420245 0.0 740.4405787420245 0.0 6.29818655252878 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.352 + + 11 + 1 1.077 52802.9 1.0 8526 4814 13332 HBL1_DMSO_200M_050219_2,13342 HBL1_DMSO_200M_050219_2,13342,SPKILITT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13343 70.817 77.0 934250.0 25 0 238190.0 + 12406 GTIGLIHAV 9 87 440.7661659458888 879.5177789585775 2 440.7663452029228 MULTI CID FTMS 0 0 0 13332 1425489.125 0.0687050521902113 4 -0.2850723266601562 11 Unmodified _GTIGLIHAV_ ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF 49.66892048692302 0.0410958345688192 4 [H{I|L}]AVA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 7 + 36.833 0.0 0.0 4.1878 4.1878 49.316 0.0 0.0 0.0 15.720967679505192 4.6040937697618745 4.6040937697618745 0.0 0 0.0 1.0969100130080565 0.0 0.0 [H{I|L}]AVA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]{I|L}GA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]{I|L}G{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]AV{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]{I|L}Q{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]AG{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]Q{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}{I|L}HA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[HA]{I|L}VA{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}{I|L}H{I|L}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.1878;4.1878;3.8456;3.8456;3.4591;3.3031;3.1168;2.4004;2.3982;2.0581 -;-;-;-;-;-;-;-;-;- 266 1 1.077 64681.1 1.0 8527 4814 13332 HBL1_DMSO_200M_050219_2,13343 HBL1_DMSO_200M_050219_2,13343,GTIGLIHAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13344 70.819 89.0 879700.0 25 0 110570.0 + 39261 VAAPPSIQI 9 106 448.2660498144704 894.5175466957409 2 448.2667419314384 MULTI CID FTMS 0 0 0 13332 1048165.1875 0.9458292952426328 -1 0.1381683349609375 12 Unmodified _VAAPPSIQI_ ENSG00000119650|ENST00000314067|IFT43;nc|ENSG00000119650|Q96FT9-2|IFT43 60.38955033654506 0.025866396858536 4 {[VA]|[{I|L}G]}AP[PS]{I|L}Q{I|L} 9 0 + 40.071 0.0 0.0 4.4796 4.4796 67.102 0.0 0.0 0.0 0.733229991387951 6.879617791072832 0.733229991387951 0.733229991387951 0 1.0994850021680094 1.3010299956639813 0.8494850021680094 0.0 + + {[VA]|[{I|L}G]}AP[PS]{I|L}Q{I|L};{[HG]|PP}S{I|L}AG{I|L}Q{I|L};{[HG]|PP}S{I|L}Q{I|L}Q{I|L};{[HG]|PP}SA{I|L}G{I|L}Q{I|L};[VP][TP]AG{I|L}Q{I|L};[AG]{I|L}P[PS]{I|L}Q{I|L};[VP][TP]Q{I|L}Q{I|L};[PA][PS]{I|L}G{I|L}Q{I|L};[Q{I|L}]P[PS]{I|L}Q{I|L};{[HG]|PP}S{I|L}VAAQ{I|L} 4.4796;4.3976;3.8716;3.4036;3.3889;3.2533;2.8629;2.7513;2.6374;1.828 +;-;-;-;-;-;-;-;-;- + 192 1 1.077 61920.9 1.0 8528 4814 13332 HBL1_DMSO_200M_050219_2,13344 HBL1_DMSO_200M_050219_2,13344,VAAPPSIQI True True VAAPPSIQI 70.818656 448.266741931438 19412534.0 13332.0 ENSG00000119650|ENST00000314067|IFT43;;nc|ENSG00000119650|Q96FT9-2|IFT43 4.956188519795735 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13345 70.82 56.0 1001500.0 25 0 124830.0 + 21766 LPMVLHFV 8 92 478.2756335834885 954.536714233777 2 479.2719909548759 MULTI CID FTMS 0 0 0 13332 984741.9375 0.8849736578323225 -1 0.1381683349609375 13 Unmodified _LPMVLHFV_ REV__ENSG00000119720|ENST00000354366|NRDE2 17.086550045450526 0.6584923310065985 4 {[QV]|[N{I|L}]|[RA]|[KV]}N[SG]{I|L} 6 -1 25.104 0.0 0.0 2.6299 0.0 0.0 0.0 353.2053903414521 353.2053903414521 5.410810659303866 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.7742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}N[SG]{I|L} 2.6299 - 200 1 1.077 48274.7 1.0 8529 4814 13332 HBL1_DMSO_200M_050219_2,13345 HBL1_DMSO_200M_050219_2,13345,LPMVLHFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13346 70.825 282.0 450790.0 25 0 47134.0 -1 CKERYKVLE 9 143 408.88510730016935 1223.633492500708 3 408.8849975466728 MULTI CID FTMS 0 0 0 13332 771179.25 1.0 0 0.0 14 Carbamidomethyl (C) _C(Carbamidomethyl (C))KERYKVLE_ ENSG00000144357|ENST00000272793|UBR3;nc|ENSG00000144357|Q6ZT12-2|UBR3;nc|ENSG00000144357|Q6ZT12-3|UBR3;nc|ENSG00000144357|Q6ZT12-4|UBR3 24.881564428377168 0.2146028316269493 4 {[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}D{I|L}KV{[QN]|[E{I|L}]|[KN]} 10 -1 + 66.285 0.0 0.0 5.4171 5.4171 84.741 0.0 0.0 0.0 10.615816609678276 7.269987279362631 7.269987279362631 10.615816609678276 0 0.6109243748081782 0.7695510786217261 1.1237125054200234 1.3338395061109685 {[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}D{I|L}KV{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T{I|L}KV{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VK{I|L}DYMPV;{[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}S{I|L}RV{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}G[YC(Carbamidomethyl (C))]{I|L}KV{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}D{I|L}[{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}T{I|L}KV{[QN]|[E{I|L}]|[KN]};A{I|L}[R{M(Oxidation (M))|F}]{I|L}DYMPV;[QP][C(Carbamidomethyl (C))H]T{I|L}KV{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}[YE]{[DS]|[MA]|[CV]|TT}KV{[QN]|[E{I|L}]|[KN]} 5.4171;4.5495;4.1955;3.5193;3.3697;3.2657;3.2109;3.0193;3.0171;2.9827 -;-;-;-;-;-;-;-;-;- 1617 1 1.077 109615.5 1.0 8530 4814 13332 HBL1_DMSO_200M_050219_2,13346 HBL1_DMSO_200M_050219_2,13346,CKERYKVLE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13347 70.827 95.0 675130.0 25 0 129140.0 27206 PGKELKVLSY 10 87 567.3295360742105 1132.644519215221 2 567.3299438357353 MULTI CID FTMS 0 0 0 13332 710760.3125 0.6883613774581989 1 -0.04632568359375 15 Unmodified _PGKELKVLSY_ ENSG00000164308|ENST00000437043|ERAP2;nc|ENSG00000164308|Q6P179-2|ERAP2;nc|ENSG00000164308|Q6P179-3|ERAP2;nc|ENSG00000164308|Q6P179-4|ERAP2 3.5964929083625545 0.7100006075494749 4 Y 1 9 13.099 0.0 0.0 1.1565 0.0 0.0 951.569978054868 0.0 951.569978054868 0.0 10.880456295278403 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1565 + + 11 + 1 1.077 57145.2 1.0 8531 4814 13332 HBL1_DMSO_200M_050219_2,13347 HBL1_DMSO_200M_050219_2,13347,PGKELKVLSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13348 70.832 270.0 1133600.0 25 0 231460.0 + 12587 GVIGGDNIRL 10 185 507.290436268224 1012.566319603248 2 507.2917053103447 MULTI CID FTMS 0 0 0 13332 725586.25 0.1443395197994167 -3 0.3299102783203125 16 Unmodified _GVIGGDNIRL_ ENSG00000108506|ENST00000251334|INTS2;nc|ENSG00000108506|Q9H0H0|INTS2 69.33821966488729 0.0189579340102328 4 [VG]{I|L}GGDN{I|L}R{I|L} 10 0 + 91.47 0.0 0.0 9.0335 9.0335 92.47 0.0 0.0 0.0 72.88663494472694 13.521825181113629 13.521825181113629 9.164539485499247 0 2.254432191740108 1.6989700043360187 0.2742275032520141 0.6109243748081782 + + [VG]{I|L}GGDN{I|L}R{I|L};[VG]{I|L}GGDGG{I|L}R{I|L};[VG]{I|L}GGD{I|L}NR{I|L};[VG]{I|L}NDN{I|L}R{I|L};[VG]{I|L}GGD{I|L}GGR{I|L};[VG]{I|L}NDGG{I|L}R{I|L};[VG]{I|L}ND{I|L}NR{I|L};[VG]{I|L}ND{I|L}GGR{I|L};[VG]{I|L}G{I|L}[DG]NR{I|L};[VG]{I|L}G{I|L}{[ES]|[DT]|[{I|L}C]}[EP]{I|L} 9.0335;8.1284;8.0672;8.0124;7.1621;7.103;7.0461;6.1367;6.0371;5.6838 +;-;-;-;-;-;-;-;-;- + 2145 + 1 1.077 232144.7 1.0 8532 4814 13332 HBL1_DMSO_200M_050219_2,13348 HBL1_DMSO_200M_050219_2,13348,GVIGGDNIRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13349 70.834 68.0 742860.0 25 0 72271.0 15899 ISSTCGSKSI 10 102 491.7465641134504 981.4785752937008 2 491.7476074099541 MULTI CID FTMS 0 0 0 13332 617107.25 0.4502251190344823 1 -0.04632568359375 17 Unmodified _ISSTCGSKSI_ ENSG00000138829|ENST00000262464|FBN2;ENST00000514742.1_1_5:127782144-127873353:-|nuORF 13.042465956692816 0.6287021003332052 4 {NN|[MP]|[D{I|L}]|[EV]}NNT 5 9 20.635 0.0 0.0 2.1024 0.0 0.0 0.0 421.2121586117633 421.2121586117633 7.140012553530969 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.4247425010840047 0.2742275032520141 {NN|[MP]|[D{I|L}]|[EV]}NNT 2.1024 - 247 1 1.077 45321.8 1.0 8533 4814 13332 HBL1_DMSO_200M_050219_2,13349 HBL1_DMSO_200M_050219_2,13349,ISSTCGSKSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13350 70.836 88.0 556270.0 25 0 122920.0 + 9155 FFYNEHTNDF 10 65 667.2778976584858 1332.5412423837715 2 667.2775756716728 MULTI CID FTMS 0 0 0 13332 604236.75 0.9163175585762304 -1 0.1381683349609375 18 Unmodified _FFYNEHTNDF_ ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A 45.69961567697781 0.105390671673896 4 {M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 3 7 28.94 0.0 0.0 2.1718 0.0 0.0 0.0 872.3173286768689 872.3173286768689 16.46591250700361 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {M(Oxidation (M))|F}{M(Oxidation (M))|F}Y 2.1718 + + 100 + 1 1.077 41263.9 1.0 8534 4814 13332 HBL1_DMSO_200M_050219_2,13350 HBL1_DMSO_200M_050219_2,13350,FFYNEHTNDF True True FFYNEHTNDF 70.835887 667.277575671673 4474810.5 13332.0 ENSG00000038532|ENST00000409790|CLEC16A;;nc|ENSG00000038532|Q2KHT3-2|CLEC16A 6.459025859832764 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13351 70.841 282.0 477440.0 25 0 107980.0 22849 LRVRGEPLQV 10 121 583.8540678220995 1165.693582710999 2 584.3551513552666 MULTI CID FTMS 0 0 0 13332 594070.0625 0.9461388569752888 -1 0.1381683349609375 19 Unmodified _LRVRGEPLQV_ ENSG00000184292|ENST00000371225|TACSTD2 12.240655878213236 0.6421556946785427 4 R{I|L}RRVED{I|L} 8 6 40.549 0.0 0.0 3.4785 0.0 0.0 0.0 125.07259546451408 125.07259546451408 20.882746829144647 0.0 0.0 0.0 0 0.7931576817365437 1.154901959985743 0.6989700043360187 0.0 R{I|L}RRVED{I|L} 3.4785 - 288 + 1 1.077 107571.6 1.0 8535 4814 13332 HBL1_DMSO_200M_050219_2,13351 HBL1_DMSO_200M_050219_2,13351,LRVRGEPLQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13352 70.846 292.0 419530.0 25 0 24398.0 + 31999 RVIDFDENTAL 11 122 646.8283425426482 1291.6421321520963 2 646.8279907107353 MULTI CID FTMS 0 0 0 13332 565654.9375 1.0 0 0.0 20 Unmodified _RVIDFDENTAL_ ENSG00000117906|ENST00000394885|RCN2;nc|ENSG00000117906|Q14257-2|RCN2 31.635753872319068 0.3493854641218054 4 [RV]{I|L}D{M(Oxidation (M))|F}DENTA{I|L} 11 0 + 74.941 0.0 0.0 5.802 5.802 83.828 0.0 0.0 0.0 5.862435673934272 63.70352343342613 5.862435673934272 9.128498242810991 0 1.0 0.0 0.5 0.0 + + [RV]{I|L}D{M(Oxidation (M))|F}DENTA{I|L};[RV]{I|L}D{M(Oxidation (M))|F}DEGGTA{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]{M(Oxidation (M))|F}DENTA{I|L};[RV]{I|L}DY{NN|[MP]|[D{I|L}]|[EV]}NTA{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]{M(Oxidation (M))|F}DENTA{I|L};[RV]{I|L}D{M(Oxidation (M))|F}DT{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]{M(Oxidation (M))|F}DEGGTA{I|L};[RV]{I|L}DY{NN|[MP]|[D{I|L}]|[EV]}GGTA{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]{M(Oxidation (M))|F}DEGGTA{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]Y{NN|[MP]|[D{I|L}]|[EV]}NTA{I|L} 5.802;5.0952;4.6563;4.2139;4.1172;4.0422;3.9495;3.5072;3.4105;3.0683 +;-;-;-;-;-;-;-;-;- + 465 1 1.077 93390.4 1.0 8536 4814 13332 HBL1_DMSO_200M_050219_2,13352 HBL1_DMSO_200M_050219_2,13352,RVIDFDENTAL False True RVIDFDENTAL 70.846464 646.827990710735 3438151.0 13332.0 ENSG00000117906|ENST00000394885|RCN2;;nc|ENSG00000117906|Q14257-2|RCN2 7.42258342107137 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13354 70.851 8.6 5809500.0 25 0 502530.0 + -1 NPREWTPEI 9 67 571.2863573968497 570.2790809302496 1 571.2858154177666 MULTI CID FTMS 0 0 0 13353 7342798.5 0.886878785840132 1 -0.0679473876953125 1 nc|ENSG00000134759|Q6IA86-7|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;ENSG00000134759|ENST00000358232|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2 4 TPE{I|L} 4 -1 29.201 0.0 0.0 5.1205 0.0 0.0 112.041087621459 0.0 112.041087621459 0.0 1.7537347247588286 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 TPE{I|L} 5.1205 - 23 + 1 1.077 47330.5 1.0 8537 4815 13353 HBL1_DMSO_200M_050219_2,13354 HBL1_DMSO_200M_050219_2,13354, False False NPREWTPEI 70.850526 571.285815417767 164769808.0 13353.0 nc|ENSG00000134759|Q6IA86-7|ELP2;;nc|ENSG00000134759|Q6IA86-3|ELP2;;nc|ENSG00000134759|Q6IA86-4|ELP2;;ENSG00000134759|ENST00000358232|ELP2;;nc|ENSG00000134759|Q6IA86-6|ELP2 5.4495158195495605 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13355 70.852 13.0 4055900.0 25 0 767300.0 + 3712 DAFPNIEKV 9 85 516.7716121511618 1031.5286713691237 2 516.7721435427666 MULTI CID FTMS 0 0 0 13353 3533521.75 0.6360042136032247 1 -0.0679473876953125 2 Unmodified _DAFPNIEKV_ ENSG00000129968|ENST00000292577|ABHD17A;ENST00000458502.2_1_17:20744816-20747364:+|nuORF;nc|ENSG00000129968|Q96GS6-2|ABHD17A 28.23362336080872 0.1719529537093671 4 {[DA]|[EG]}{M(Oxidation (M))|F}PN{I|L}EKV 9 0 + 56.582 0.0 0.0 5.4853 5.4853 81.44 0.0 0.0 0.0 28.16569691289537 6.61159286695316 6.61159286695316 7.730012720637376 0 0.4247425010840047 1.6989700043360187 0.805462187404089 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}PN{I|L}EKV;{[DA]|[EG]}{M(Oxidation (M))|F}V[QP]EKV;{[DA]|[EG]}{M(Oxidation (M))|F}PGG{I|L}EKV;W{M(Oxidation (M))|F}[WR][QP]{I|L} 5.4853;4.7359;4.5926;1.6491 +;-;-;- + 88 + 1 1.077 49453.5 1.0 8538 4815 13353 HBL1_DMSO_200M_050219_2,13355 HBL1_DMSO_200M_050219_2,13355,DAFPNIEKV False True DAFPNIEKV 70.851705 516.772143542767 70100432.0 13353.0 ENSG00000129968|ENST00000292577|ABHD17A;;ENST00000458502.2_1_17:20744816-20747364:+|nuORF;;nc|ENSG00000129968|Q96GS6-2|ABHD17A 8.000813007354736 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13356 70.853 16.0 2518400.0 25 0 186860.0 + 44542 YPESLVRVV 9 68 531.3019145220777 1060.589276110955 2 531.3015014529228 MULTI CID FTMS 0 0 0 13353 1724991.625 1.0 0 0.0 3 Unmodified _YPESLVRVV_ ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6 34.40172386719151 0.1061884637610825 4 YPES{I|L}V[RV]V 9 0 + 70.596 0.0 0.0 6.6563 6.6563 93.736 0.0 0.0 0.0 50.67410004652736 4.973024840566467 4.973024840566467 70.59562510389476 0 0.3494850021680094 1.5228787452803376 0.4247425010840047 0.0 + + YPES{I|L}V[RV]V 6.6563 + + 47 + 1 1.077 41700.9 1.0 8539 4815 13353 HBL1_DMSO_200M_050219_2,13356 HBL1_DMSO_200M_050219_2,13356,YPESLVRVV True True YPESLVRVV 70.852885 531.301501452923 40666088.0 13353.0 nc|ENSG00000032444|Q8IY17-5|PNPLA6;;nc|ENSG00000032444|Q8IY17-3|PNPLA6;;nc|ENSG00000032444|Q8IY17|PNPLA6;;ENSG00000032444|ENST00000600737|PNPLA6;;nc|ENSG00000032444|Q8IY17-2|PNPLA6 6.513051827748616 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13357 70.854 62.0 1533000.0 25 0 130220.0 + 6086 DSQILPKI 8 111 457.271325564497 912.528098195794 2 457.2715026736259 MULTI CID FTMS 0 0 0 13353 1386793.25 0.196388664234785 4 -0.3161468505859375 4 Unmodified _DSQILPKI_ ENSG00000089009|ENST00000202773|RPL6;ENST00000456481.1_1_7:137407104-137407545:+|nuORF;ENST00000489915.1_1_18:6462145-6462637:-|nuORF 46.020951573049366 0.1579632664462935 4 NSE{I|L}{I|L}PK{I|L} 8 2 + 46.161 0.0 0.0 5.0585 5.0585 83.477 0.0 0.0 0.0 31.31074425743012 10.0854292192491 10.0854292192491 11.590579197569006 0 0.9163865622122672 0.0 0.0 0.0 NSE{I|L}{I|L}PK{I|L};NSE{I|L}{I|L}{I|L}[KP] 5.0585;3.7884 -;- 117 + 1 1.077 79172.5 1.0 8540 4815 13353 HBL1_DMSO_200M_050219_2,13357 HBL1_DMSO_200M_050219_2,13357,DSQILPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13358 70.858 192.0 1022000.0 25 0 44639.0 -1 MYFWKRFCFWK 11 140 857.9015707633433 1713.7885885934866 2 858.4029418826103 MULTI CID FTMS 0 0 0 13353 1316711.0 1.0 0 0.0 5 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 4 [MN]PN{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L}S 15 -1 102.01 0.0 0.0 5.9521 0.0 0.0 0.0 121.0414827936156 121.0414827936156 73.14453507409705 0.0 0.0 0.0 0 1.7658715643802765 1.5228787452803376 0.4247425010840047 1.4049471895720984 [MN]PN{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L}S 5.9521 - 5141 + 1 1.077 131558.8 1.0 8541 4815 13353 HBL1_DMSO_200M_050219_2,13358 HBL1_DMSO_200M_050219_2,13358,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13359 70.859 43.0 1524900.0 25 0 154000.0 + 169 AAMEDLTRL 9 84 510.26302615118016 1018.5114993691604 2 510.2634460330009 MULTI CID FTMS 0 0 0 13353 1298718.625 0.2655210922375601 -3 0.2793960571289062 6 Unmodified _AAMEDLTRL_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000523646.1_1_8:109240494-109241379:-|nuORF 38.17557092003332 0.0854718145212029 4 AAMED{I|L}TR{I|L} 9 0 + 72.335 0.0 0.0 7.102 7.102 95.36 0.0 0.0 0.0 60.34494693774264 11.444474089518408 11.444474089518408 72.33464698110282 0 0.7302046884880937 1.6989700043360187 0.4247425010840047 0.3494850021680094 + + AAMED{I|L}TR{I|L} 7.102 + + 112 + 1 1.077 53176.4 1.0 8542 4815 13353 HBL1_DMSO_200M_050219_2,13359 HBL1_DMSO_200M_050219_2,13359,AAMEDLTRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13360 70.861 93.0 1439900.0 25 0 79769.0 11620 GLAEAVLEA 9 103 872.471704133506 871.464427666906 1 872.4726440310478 MULTI CID FTMS 0 0 0 13353 1173962.875 0.1813576898439803 3 -0.2387466430664062 7 Unmodified _GLAEAVLEA_ ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP 74.42276476219924 0.019389277360085 4 {[CP]|[EA]}AVA{I|L}VEA 9 4 + 65.997 0.0 0.0 7.5731 7.5731 79.547 0.0 0.0 0.0 2.23157870982439 16.478174818886373 2.23157870982439 1.249387366082999 0 0.6421590589602533 0.0 1.274227503252014 0.0 {[CP]|[EA]}AVA{I|L}VEA;{[CP]|[EA]}A{I|L}G{I|L}VEA;{[CP]|[EA]}AAV{I|L}VEA;{[VA]|[{I|L}G]}[VG]D{I|L}VEA;{[VA]|[{I|L}G]}DVG{I|L}VEA;{[VA]|[{I|L}G]}AEA{I|L}VEA;{[VA]|[{I|L}G]}DGV{I|L}VEA;{[CP]|[EA]}AG{I|L}{I|L}VEA;{NN|[MP]|[D{I|L}]|[EV]}NV{I|L}VEA;{[VA]|[{I|L}G]}{I|L}DGVVEA 7.5731;7.4297;7.3185;7.317;7.2848;7.2605;7.1736;6.9731;6.9206;6.8793 -;-;-;-;-;-;-;-;-;- 4645 1 1.077 91872.6 1.0 8543 4815 13353 HBL1_DMSO_200M_050219_2,13360 HBL1_DMSO_200M_050219_2,13360,GLAEAVLEA True True GLIDGVVEA 70.861366 872.472644031048 57986524.0 13353.0 ENSG00000104824|ENST00000221419|HNRNPL 5.002575079600017 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13361 70.863 85.0 1054400.0 25 0 97437.0 + 44433 YMIDPSGVSY 10 110 566.2549721209491 1130.495391308698 2 566.2559081912041 MULTI CID FTMS 0 0 0 13353 1047740.5625 0.0320973988756634 -5 0.4482650756835937 8 Unmodified _YMIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 37.97399986684836 0.1789611706409123 4 [PS]GVYMEVSY 10 7 + 33.566 0.0 0.0 2.9692 2.9692 63.273 0.0 0.0 0.0 3.915844814517797 4.542513289233277 3.915844814517797 1.2050654486819283 0 0.8935078169319297 0.4559319556497244 0.1989700043360188 0.0 [PS]GVYMEVSY;[PS]GDVYM{I|L}SY;[PS]GVYMD{I|L}SY;[VG]SPYMEVSY;[PS]GVDYM{I|L}SY;{[QD]|[EN]|[WG]|[KD]|[RS]}PYMEVSY;[PS]GVYDM{I|L}SY;[VG]SPYMD{I|L}SY;[VG]SPDYM{I|L}SY;{[QD]|[EN]|[WG]|[KD]|[RS]}PYMD{I|L}SY 2.9692;2.8626;2.7029;2.6228;2.5924;2.4858;2.4366;2.3565;2.246;2.2195 -;-;-;-;-;-;-;-;-;- 520 1 1.077 73725.5 1.0 8544 4815 13353 HBL1_DMSO_200M_050219_2,13361 HBL1_DMSO_200M_050219_2,13361,YMIDPSGVSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13362 70.865 44.0 1591000.0 25 0 202380.0 + 33651 SISSVLLPMP 10 98 522.2951522026177 1042.575751472035 2 522.2955200076103 MULTI CID FTMS 0 0 0 13353 1065501.5 0.7577154147934926 -2 0.1844940185546875 9 Unmodified _SISSVLLPMP_ REV__ENSG00000236699|ENST00000420470|ARHGEF38 10.823927491677226 0.6659270209832991 4 {I|L} 1 -1 10.485 0.0 0.0 1.0056 0.0 0.0 911.480610946448 0.0 911.480610946448 0.0 0.9516584908514591 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0056 + + 35 + 1 1.077 56338.6 1.0 8545 4815 13353 HBL1_DMSO_200M_050219_2,13362 HBL1_DMSO_200M_050219_2,13362,SISSVLLPMP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13363 70.869 219.0 321560.0 25 0 21940.0 + 13271 HINLTALKTL 10 127 562.3437104478446 1122.6728679624891 2 562.3435546755791 MULTI CID FTMS 0 0 0 13353 847666.1875 1.0 0 0.0 10 Unmodified _HINLTALKTL_ REV__ENSG00000153107|ENST00000341068|ANAPC1;REV__ENST00000485325.1_1_2:112560984-112579093:-|nuORF 6.2057823575117 0.6979311171683138 4 [VS]YP 4 -1 17.201 0.0 0.0 1.5322 0.0 0.0 0.0 673.4286412381329 673.4286412381329 0.8712360922559625 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [VS]YP 1.5322 - 198 1 1.077 58786.8 1.0 8546 4815 13353 HBL1_DMSO_200M_050219_2,13363 HBL1_DMSO_200M_050219_2,13363,HINLTALKTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13364 70.871 81.0 1041200.0 25 0 96298.0 + 25588 NFIATVREV 9 98 524.7909100002169 1047.5672670672336 2 524.7932617068291 MULTI CID FTMS 0 0 0 13353 863521.25 0.4625705715799965 1 -0.0679473876953125 11 Unmodified _NFIATVREV_ ENSG00000140382|ENST00000336216|HMG20A 43.77239144664712 0.0547478964384323 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}ATV{[RE]|[WV]}V 9 0 + 43.707 0.0 0.0 4.1722 4.1722 70.243 0.0 0.0 0.0 7.147642715192504 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.5 0.0 0.7614393726401688 0.0 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}ATV{[RE]|[WV]}V;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}ATV[RD]{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AT[RD]{I|L}V;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[TV]|[{I|L}S]}V{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AT[RD]V{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V[TA]{[RE]|[WV]}V;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AT{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V{[TV]|[{I|L}S]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V[TA][RD]{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}[{M(Oxidation (M))|F}V]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 4.1722;3.8849;3.4294;3.2201;3.142;2.6697;2.6058;2.4621;2.3823;1.7733 +;-;-;-;-;-;-;-;-;- + 331 + 1 1.077 69863.5 1.0 8547 4815 13353 HBL1_DMSO_200M_050219_2,13364 HBL1_DMSO_200M_050219_2,13364,NFIATVREV True True NFIATVREV 70.870503 524.793261706829 12221879.0 13353.0 ENSG00000140382|ENST00000336216|HMG20A 5.944129467010498 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13365 70.875 256.0 796270.0 25 0 31668.0 -1 0 145 873.9143152313983 1745.8140775295965 2 874.4164916872978 MULTI CID FTMS 0 0 0 13353 772801.25 0.5481773558004348 -1 0.04632568359375 12 4 [MN]PN{I|L}NEA[RH]MN{I|L} 13 -1 95.488 0.0 0.0 5.4695 0.0 0.0 0.0 208.07366357974848 208.07366357974848 34.6346799108044 0.0 0.0 0.0 0 0.6747425010840047 1.3979400086720375 0.7059771852360797 1.9991348669726232 [MN]PN{I|L}NEA[RH]MN{I|L} 5.4695 - 15716 + 1 1.077 134745.6 1.0 8548 4815 13353 HBL1_DMSO_200M_050219_2,13365 HBL1_DMSO_200M_050219_2,13365, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13366 70.877 104.0 1925000.0 25 0 438530.0 + 35592 STVEALQNL 9 127 487.7612862354965 973.5080195377932 2 487.7615539431572 MULTI CID FTMS 0 0 0 13353 774226.8125 0.3596527916895303 -3 0.2793960571289062 13 Unmodified _STVEALQNL_ ENSG00000143401|ENST00000583931|ANP32E;nc|ENSG00000143401|Q9BTT0-3|ANP32E 50.855029805455786 0.0384952370514206 4 {NN|[MP]|[D{I|L}]|[EV]}K{I|L} 4 6 28.007 0.0 0.0 2.8769 0.0 0.0 0.0 501.1946399814056 501.1946399814056 2.6254307704504534 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3054621874040891 0.4802046884880938 {NN|[MP]|[D{I|L}]|[EV]}K{I|L} 2.8769 - 757 1 1.077 153893.0 1.0 8549 4815 13353 HBL1_DMSO_200M_050219_2,13366 HBL1_DMSO_200M_050219_2,13366,STVEALQNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13367 70.882 268.0 465330.0 25 0 30303.0 -1 ELVFGGLMVML 11 126 612.8238837916101 1223.63321465002 2 612.8225585818291 MULTI CID FTMS 0 0 0 13353 605530.3125 1.0 0 0.0 14 Oxidation (M) _ELVFGGLMVM(Oxidation (M))L_ ENST00000576873.2_1_15:32907194-32907332:-|nuORF 58.6788170122104 0.0745071270787045 4 {NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T{I|L}KVE{I|L} 10 -1 + 83.326 0.0 0.0 6.8097 6.8097 85.85 0.0 0.0 0.0 11.03286222516239 11.03286222516239 11.03286222516239 6.773627198303132 0 1.3494850021680094 1.3979400086720375 2.1237125054200234 0.0 {NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}EEHKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}N[SG]HKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]DHKVE{I|L};EMVK{I|L}T{[{M(Oxidation (M))|F}D]|MM}E{I|L};{[QN]|[E{I|L}]|[KN]}{[YC]|[HE]}D{I|L}KVE{I|L};EMVK{I|L}D[{M(Oxidation (M))|F}T]E{I|L};{[QN]|[E{I|L}]|[KN]}VEEHKVE{I|L};[KQ]{I|L}DDHKVE{I|L};{[QN]|[E{I|L}]|[KN]}VN[SG]HKVE{I|L} 6.8097;6.2561;6.0555;5.9273;5.908;5.8554;5.662;5.5478;5.5309;5.3472 -;-;-;-;-;-;-;-;-;- 1979 1 1.077 100726.1 1.0 8550 4815 13353 HBL1_DMSO_200M_050219_2,13367 HBL1_DMSO_200M_050219_2,13367,ELVFGGLMVML False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13368 70.885 107.0 863690.0 25 0 99935.0 + 35724 SVHGDFLNV 9 126 494.24858197868105 986.482611024162 2 494.2484008669853 MULTI CID FTMS 0 0 0 13353 508348.3125 1.0 0 0.0 15 Unmodified _SVHGDFLNV_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 52.268347100219714 0.0353964759249114 4 GD{M(Oxidation (M))|F}{I|L}NV 6 3 44.628 0.0 0.0 4.5239 0.0 0.0 323.1600514142594 0.0 323.1600514142594 0.0 29.63560197082277 0.0 0.0 0 0.8494850021680094 0.0 0.6747425010840047 0.0 + GD{M(Oxidation (M))|F}{I|L}NV 4.5239 + + 807 1 1.077 75313.8 1.0 8551 4815 13353 HBL1_DMSO_200M_050219_2,13368 HBL1_DMSO_200M_050219_2,13368,SVHGDFLNV True True SVHGDFLNV 70.884735 494.248400866985 7183519.5 13353.0 ENSG00000169093|ENST00000381317|ASMTL;;nc|ENSG00000292339|O95671-3|ASMTL;;nc|ENSG00000292339|O95671-2|ASMTL 7.673738320668538 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13369 70.89 312.0 531450.0 25 0 111030.0 -1 0 100 759.0990808785904 2274.275413235971 3 759.0989257693291 MULTI CID FTMS 0 0 0 13353 486105.9375 1.0 0 0.0 16 4 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KV{M(Oxidation (M))|F}{I|L} 10 -1 52.494 0.0 0.0 2.3082 0.0 0.0 0.0 1071.5726720870264 1071.5726720870264 5.3711334098308186 0.0 0.0 0.0 0 0.0 1.0 1.16944517631652 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KV{M(Oxidation (M))|F}{I|L} 2.3082 - 1487 1 1.077 127888.6 1.0 8552 4815 13353 HBL1_DMSO_200M_050219_2,13369 HBL1_DMSO_200M_050219_2,13369, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13370 70.896 294.0 595500.0 25 0 86230.0 + 37283 TIQEEFYRV 9 157 592.8018118369616 1183.5890707407232 2 592.8038207888603 MULTI CID FTMS 0 0 0 13353 465065.0625 1.0 0 0.0 17 Unmodified _TIQEEFYRV_ ENSG00000076003|ENST00000264156|MCM6 51.487983226225225 0.0371074584807926 4 [{I|L}T]QEE{M(Oxidation (M))|F}YRV 9 0 + 95.231 0.0 0.0 8.0459 8.0459 91.939 0.0 0.0 0.0 72.80898405655353 10.20181229336984 10.20181229336984 9.208187539523747 0 1.055462187404089 2.0 1.1549471895720984 0.805462187404089 + + [{I|L}T]QEE{M(Oxidation (M))|F}YRV;[{I|L}T][AG]EE{M(Oxidation (M))|F}YRV;[{I|L}T]QEE{M(Oxidation (M))|F}[RV]Y;[{I|L}T][AG]EE{M(Oxidation (M))|F}[RV]Y;[{I|L}T]Q{M(Oxidation (M))|F}EEYRV;{[TV]|[{I|L}S]}[HV]{M(Oxidation (M))|F}EEQPV;[{I|L}T]QEV{[QV]|[N{I|L}]|[RA]|[KV]}[HQ]C;[AG]{I|L}[WR]EEQPV;[{I|L}T][AG]{M(Oxidation (M))|F}EEYRV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{[QV]|[N{I|L}]|[RA]|[KV]}VEQPV 8.0459;7.2679;6.5166;5.7386;5.4212;5.1519;4.8301;4.8006;4.6432;4.6401 +;-;-;-;-;-;-;-;-;- + 1080 + 1 1.077 131435.5 1.0 8553 4815 13353 HBL1_DMSO_200M_050219_2,13370 HBL1_DMSO_200M_050219_2,13370,TIQEEFYRV True True TIQEEFYRV 70.895851 592.80382078886 4731218.0 13353.0 ENSG00000076003|ENST00000264156|MCM6 5.370806058247884 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13371 70.902 322.0 254830.0 25 0 21807.0 -1 0 77 864.8475177847953 3455.360965272781 4 865.1006957888603 MULTI CID FTMS 0 0 0 13353 466709.65625 0.8761236717682873 1 -0.0679473876953125 18 4 E 1 -1 5.4846 0.0 0.0 0.15873 0.0 0.0 2937.2253762663804 386.0680475875348 3323.293423853915 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15873 - 62 + 1 1.077 68170.1 1.0 8554 4815 13353 HBL1_DMSO_200M_050219_2,13371 HBL1_DMSO_200M_050219_2,13371, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13372 70.907 299.0 538430.0 25 0 68475.0 + -1 KQITSLMCWI 10 113 619.8187009125302 1237.6228488918605 2 619.8195678591728 MULTI CID FTMS 0 0 0 13353 447078.0 0.4971992934773996 -2 0.1844940185546875 19 Oxidation (M) _KQITSLM(Oxidation (M))CWI_ REV__nc|ENSG00000120948|Q13148-4|TARDBP 47.74868867922204 0.0933642699623533 4 [AG]Q{I|L}DD[PG]D{I|L}Q 11 -1 68.752 0.0 0.0 5.5551 0.0 0.0 0.0 125.07267175845938 125.07267175845938 41.78775437731733 0.0 0.0 0.0 0 0.3807196863200844 1.0457574905606752 1.079689690656103 1.25 [AG]Q{I|L}DD[PG]D{I|L}Q 5.5551 - 1029 + 1 1.077 120095.8 1.0 8555 4815 13353 HBL1_DMSO_200M_050219_2,13372 HBL1_DMSO_200M_050219_2,13372,KQITSLMCWI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13373 70.914 330.0 351460.0 25 0 56145.0 -1 0 87 868.3448508058237 3469.3502973568948 4 868.8479492068291 MULTI CID FTMS 0 0 0 13353 419156.90625 1.0 0 0.0 20 4 {I|L}{I|L}STV 5 -1 22.273 0.0 0.0 0.64199 0.0 0.0 2619.840604464326 333.15732752017817 2952.997931984504 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9876954943324544 0.0 {I|L}{I|L}STV 0.64199 - 158 + 1 1.077 84255.5 1.0 8556 4815 13353 HBL1_DMSO_200M_050219_2,13373 HBL1_DMSO_200M_050219_2,13373, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13375 70.918 7.0 2185600.0 25 0 200900.0 32024 RVIEGDVVSAL 11 41 579.3302478418418 1156.6459427504835 2 579.3308593630791 MULTI CID FTMS 0 0 0 13374 7656299.5 0.7782321749010426 1 -0.0953598022460937 1 Unmodified _RVIEGDVVSAL_ ENSG00000169756|ENST00000544547|LIMS1;ENSG00000256671|ENST00000632897|LIMS4;ENSG00000256977|ENST00000480744|LIMS3;ENST00000603767.1_1_2:111195993-111209584:-|nuORF;nc|ENSG00000169756|P48059-3|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059|LIMS1 4.189502756095605 0.855381588458882 4 VV 2 9 10.969 0.0 0.0 0.94835 0.0 0.0 289.1642665803648 666.3250826471311 955.489349227496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + VV 0.94835 + + 5 + 1 1.051 20379.5 1.0 8557 4816 13374 HBL1_DMSO_200M_050219_2,13375 HBL1_DMSO_200M_050219_2,13375,RVIEGDVVSAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13376 70.92 67.0 196530.0 25 0 18233.0 42141 VRWRKKFS 8 37 553.8302735297617 1105.645994126323 2 553.8307372927666 MULTI CID FTMS 0 0 0 13374 820567.4375 0.7196109662592239 1 -0.0953598022460937 2 Unmodified _VRWRKKFS_ ENSG00000162636|ENST00000370035|EEIG2;nc|ENSG00000162636|Q5T8I3-2|EEIG2 0.6903765706972694 0.8201419426409876 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.051 17243.3 1.0 8558 4816 13374 HBL1_DMSO_200M_050219_2,13376 HBL1_DMSO_200M_050219_2,13376,VRWRKKFS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13377 70.924 221.0 866930.0 25 0 85639.0 + -1 AQLPEQVTL 9 94 998.402221396055 2992.1848347883647 3 998.7369872927666 MULTI CID FTMS 0 0 0 13374 996880.5625 0.9912785377088642 -1 0.0679473876953125 3 ENSG00000100060|ENST00000356998|MFNG;nc|ENSG00000100060|O00587-2|MFNG 4 [EP]QV{I|L}AQTM 9 -1 48.568 0.0 0.0 1.6232 0.0 0.0 0.0 1991.6903639233835 1991.6903639233835 37.99471895720984 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 1.298455006504028 [EP]QV{I|L}AQTM 1.6232 - 6797 1 1.051 145570.2 1.0 8559 4816 13374 HBL1_DMSO_200M_050219_2,13377 HBL1_DMSO_200M_050219_2,13377, False False AQLPEQVTL 70.924282 998.736987292767 5779700.5 13374.0 ENSG00000100060|ENST00000356998|MFNG;;nc|ENSG00000100060|O00587-2|MFNG 5.94080114364624 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13378 70.93 328.0 610440.0 25 0 32791.0 + 34533 SPAPPLLHV 9 166 465.7744725927208 929.5343922522416 2 465.7742797732353 MULTI CID FTMS 0 0 0 13374 423902.21875 1.0 0 0.0 4 Unmodified _SPAPPLLHV_ ENSG00000158941|ENST00000308511|CCAR2;nc|ENSG00000158941|Q8N163-2|CCAR2 67.03532852164291 0.0222449892513529 4 SPAP{I|L}P{I|L}HV 9 2 + 71.723 0.0 0.0 7.7161 7.7161 87.836 0.0 0.0 0.0 48.930021956316224 6.747425010840047 6.747425010840047 6.368220975871751 0 1.5682503180159344 1.6989700043360187 0.0 0.0 SPAP{I|L}P{I|L}HV;SPAP{I|L}PH{I|L}V;SPAP{I|L}PHV{I|L};SPA[{I|L}T]VVM{I|L};S[HK]{I|L}P{I|L}HV;S[HK]{I|L}PH{I|L}V;S[HK]{I|L}PHV{I|L};S[{I|L}A][YK]{I|L}HV;SVSVPVVM{I|L};S[{I|L}A][YK]H{I|L}V 7.7161;7.031;6.6697;4.5212;2.827;2.1419;1.7807;1.2976;1.1841;0.61249 -;-;-;-;-;-;-;-;-;- 745 + 1 1.051 154379.5 1.0 8560 4816 13374 HBL1_DMSO_200M_050219_2,13378 HBL1_DMSO_200M_050219_2,13378,SPAPPLLHV True True SPAPPLLHV 70.93023 465.774279773235 4229982.0 13374.0 ENSG00000158941|ENST00000308511|CCAR2;;nc|ENSG00000158941|Q8N163-2|CCAR2 5.909057140350342 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13379 70.936 335.0 154100.0 25 0 32378.0 -1 0 41 1066.0956183117946 3195.265025535584 3 1066.432421863079 MULTI CID FTMS 0 0 0 13374 400184.96875 0.0208916468357363 8 -0.8183822631835938 5 4 Y 1 -1 6.9897 0.0 0.0 0.21875 0.0 0.0 1328.4646848146838 1700.727327399477 3029.192012214161 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.21875 - 2 + 1 1.051 49619.0 1.0 8561 4816 13374 HBL1_DMSO_200M_050219_2,13379 HBL1_DMSO_200M_050219_2,13379, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13380 70.942 321.0 591960.0 25 0 135580.0 -1 0 118 685.7349117906517 2054.182905972155 3 685.7348510622978 MULTI CID FTMS 0 0 0 13374 350950.03125 0.8371593179549502 1 -0.0953598022460937 6 4 {[QN]|[E{I|L}]|[KN]}NKTVRV{M(Oxidation (M))|F}{I|L} 10 -1 59.866 0.0 0.0 2.9143 0.0 0.0 0.0 851.4807821255164 851.4807821255164 23.305910138733665 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.4538271422956004 0.8494850021680094 {[QN]|[E{I|L}]|[KN]}NKTVRV{M(Oxidation (M))|F}{I|L} 2.9143 - 16051 1 1.051 141770.6 1.0 8562 4816 13374 HBL1_DMSO_200M_050219_2,13380 HBL1_DMSO_200M_050219_2,13380, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13381 70.948 301.0 522720.0 25 0 37157.0 + 42776 RIVDVYENL 9 145 560.816952990828 1119.619353048456 2 560.8161498904228 MULTI CID FTMS 0 0 0 13374 311356.84375 0.5253661061942609 1 -0.0953598022460937 7 Unmodified _VVIKGDFETI_ ENSG00000162889|ENST00000367103|MAPKAPK2;nc|ENSG00000162889|P49137-2|MAPKAPK2 49.55428908609986 0.0827668555218455 4 VV{[RE]|[WV]}VYEN{I|L} 9 6 + 58.637 0.0 0.0 5.2372 5.2372 78.199 0.0 0.0 0.0 5.612679567800512 10.853729332486653 5.612679567800512 5.612679567800512 0 0.3807196863200844 1.5228787452803376 0.3494850021680094 0.3252574989159953 VV{[RE]|[WV]}VYEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]VYAAT{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]K{M(Oxidation (M))|F}ET{I|L};VV{[RE]|[WV]}VYEGG{I|L};VV{[RE]|[WV]}VYAAT{I|L};VVT[PS]K{M(Oxidation (M))|F}ET{I|L};VVT[PS]VYAAT{I|L};VV{[RE]|[WV]}K{M(Oxidation (M))|F}ET{I|L};VV{I|L}[DG]K{M(Oxidation (M))|F}ET{I|L};VV{I|L}[DG]VYAAT{I|L} 5.2372;4.7359;4.4829;4.4148;4.368;4.2722;4.2387;4.1149;4.0957;4.0621 -;-;-;-;-;-;-;-;-;- 2768 1 1.051 123197.6 1.0 8563 4816 13374 HBL1_DMSO_200M_050219_2,13381 HBL1_DMSO_200M_050219_2,13381,VVIKGDFETI True True RIVDVYENL 70.947697 560.816149890423 4817823.0 13374.0 ENSG00000162889|ENST00000367103|MAPKAPK2;;nc|ENSG00000162889|P49137-2|MAPKAPK2 5.5675638516743975 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13382 70.955 392.0 488380.0 25 0 53500.0 + 41239 VPFVGKVHI 9 162 332.5396496529488 994.5971195590464 3 332.5391113162041 MULTI CID FTMS 0 0 0 13374 337321.5625 0.51372641628864 -4 0.3473434448242187 8 Unmodified _VPFVGKVHI_ ENSG00000131979|ENST00000491895|GCH1;nc|ENSG00000131979|P30793-2|GCH1;nc|ENSG00000131979|P30793-3|GCH1;nc|ENSG00000131979|P30793-4|GCH1 32.30548876998284 0.1201446275138228 4 VP{M(Oxidation (M))|F}VGKVH{I|L} 9 0 + 55.954 0.0 0.0 5.6258 5.6258 79.833 0.0 0.0 0.0 25.01689446210399 5.593080109070115 5.593080109070115 5.593080109070115 0 0.5176452685714268 0.8538719643217619 0.0 0.0 + + VP{M(Oxidation (M))|F}VGKVH{I|L};VP{M(Oxidation (M))|F}VGKV{I|L}H;V{I|L}MVGKVH{I|L};V{I|L}MVGKV{I|L}H 5.6258;5.0634;4.4646;3.9023 +;-;-;- + 1020 + 1 1.051 156059.0 1.0 8564 4816 13374 HBL1_DMSO_200M_050219_2,13382 HBL1_DMSO_200M_050219_2,13382,VPFVGKVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13383 70.96 311.0 289300.0 25 0 20084.0 + 35748 SVIEDKTIEL 10 125 573.8165938707891 1145.618634808378 2 573.8174926638603 MULTI CID FTMS 0 0 0 13374 315953.625 0.6036680004998666 1 -0.0953598022460937 9 Unmodified _SVIEDKTIEL_ ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11 24.99096001346401 0.4071966087057876 4 [VS]{I|L}EYT{I|L}{I|L} 8 3 60.94 0.0 0.0 5.3194 0.0 0.0 0.0 224.1047457330688 224.1047457330688 26.406694367302983 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.035666875892183 0.0 [VS]{I|L}EYT{I|L}{I|L} 5.3194 - 1347 + 1 1.051 73871.4 1.0 8565 4816 13374 HBL1_DMSO_200M_050219_2,13383 HBL1_DMSO_200M_050219_2,13383,SVIEDKTIEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13384 70.966 315.0 738700.0 25 0 59262.0 + -1 MYVLFSNVGH 10 196 591.7862166943147 1181.5578804554293 2 592.2888671755791 MULTI CID FTMS 0 0 0 13374 296141.59375 0.4190820318166091 -3 0.25244140625 10 Oxidation (M) _M(Oxidation (M))YVLFSNVGH_ REV__ENSG00000092964|ENST00000521913|DPYSL2;REV__nc|ENSG00000092964|Q16555-2|DPYSL2;REV__nc|ENSG00000092964|Q16555|DPYSL2 13.90604991867851 0.6142120002215601 4 {I|L}QEE{M(Oxidation (M))|F}YRV 8 -1 48.181 0.0 0.0 4.0777 0.0 0.0 99.02694891421682 0.0 99.02694891421682 0.0 21.441939287695497 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.3252574989159953 {I|L}QEE{M(Oxidation (M))|F}YRV 4.0777 - 3972 + 1 1.051 170648.1 1.0 8566 4816 13374 HBL1_DMSO_200M_050219_2,13384 HBL1_DMSO_200M_050219_2,13384,MYVLFSNVGH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13385 70.973 355.0 736530.0 25 0 65309.0 + -1 SLLLRSCL 8 201 481.2786246603167 960.5426963874334 2 481.2777282595634 MULTI CID FTMS 0 0 0 13374 296025.78125 1.0 0 0.0 11 Carbamidomethyl (C) _SLLLRSC(Carbamidomethyl (C))L_ REV__ENSG00000113889|ENST00000644859|KNG1;REV__nc|ENSG00000113889|P01042-2|KNG1;REV__nc|ENSG00000113889|P01042-3|KNG1 30.22481116460888 0.4082965392918993 4 {[TV]|[{I|L}S]}V{I|L}PNRY 8 -1 + 41.092 0.0 0.0 4.278 4.278 67.695 0.0 0.0 0.0 12.532575926467931 1.701134704268405 1.701134704268405 1.4878032203523477 0 0.6989700043360187 2.0 0.0 0.0 {[TV]|[{I|L}S]}V{I|L}PNRY;{[TV]|[{I|L}S]}V{I|L}PAAQY;{[TV]|[{I|L}S]}HT[KT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[TV]|[{I|L}S]}{I|L}{I|L}[QP]QY;{[TV]|[{I|L}S]}[RP]PT[YK];{[TV]|[{I|L}S]}{I|L}{I|L}[C(Carbamidomethyl (C))R]S{I|L};{[TV]|[{I|L}S]}V{I|L}PAA[AG]Y;{[TV]|[{I|L}S]}H[{I|L}A]VPQP;{[TV]|[{I|L}S]}H{[VA]|[{I|L}G]}{I|L}PQP;{[TV]|[{I|L}S]}{I|L}{I|L}[C(Carbamidomethyl (C))R]TV 4.278;4.1232;3.5218;3.1455;2.9294;2.8451;2.7223;2.7003;2.7003;2.5921 -;-;-;-;-;-;-;-;-;- 4738 + 1 1.051 193827.1 1.0 8567 4816 13374 HBL1_DMSO_200M_050219_2,13385 HBL1_DMSO_200M_050219_2,13385,SLLLRSCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13386 70.98 355.0 193440.0 25 0 43713.0 -1 0 71 763.7722181874783 2288.294825162635 3 764.1075317263603 MULTI CID FTMS 0 0 0 13374 265020.5625 0.9363425873532676 1 -0.0953598022460937 12 4 {NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L}KV{M(Oxidation (M))|F}{I|L} 10 -1 48.109 0.0 0.0 2.1024 0.0 0.0 0.0 1085.592753452909 1085.592753452909 9.510365488874932 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.9247425010840048 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L}KV{M(Oxidation (M))|F}{I|L} 2.1024 - 302 1 1.051 58064.1 1.0 8568 4816 13374 HBL1_DMSO_200M_050219_2,13386 HBL1_DMSO_200M_050219_2,13386, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13387 70.987 408.0 244030.0 25 0 17712.0 + -1 AADIGQIQEL 10 101 1056.5464560306502 2111.0783591281006 2 1057.553271472454 MULTI CID FTMS 0 0 0 13374 219713.921875 0.6402342283423561 1 -0.0953598022460937 13 ENSG00000133454|ENST00000335473|MYO18B;nc|ENSG00000133454|Q8IUG5-2|MYO18B;nc|ENSG00000133454|Q8IUG5-3|MYO18B 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GQ{I|L}QE 8 -1 69.554 0.0 0.0 3.2947 0.0 0.0 0.0 1182.5990249818694 1182.5990249818694 33.4880978226169 0.0 0.0 0.0 0 0.0 0.0 2.584121882396211 1.6368617341927687 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GQ{I|L}QE 3.2947 - 4343 1 1.051 68899.9 1.0 8569 4816 13374 HBL1_DMSO_200M_050219_2,13387 HBL1_DMSO_200M_050219_2,13387, False False AADIGQIQEL 70.987469 1057.55327147245 2896719.75 13374.0 ENSG00000133454|ENST00000335473|MYO18B;;nc|ENSG00000133454|Q8IUG5-2|MYO18B;;nc|ENSG00000133454|Q8IUG5-3|MYO18B 2.7726348837216697 1.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13388 70.995 394.0 494240.0 25 0 43560.0 + -1 ALTGAILAA 9 108 800.4892209692541 0 800.7922241091728 PEAK CID FTMS 0 0 0 13374 133337.375 0.3564090625617606 -2 0.1142730712890625 14 ENSG00000134375|ENST00000367287|TIMM17A;ENST00000482943.1_1_1:201932715-201938679:+|nuORF 4 HE{[SA]|[TG]}AA{I|L}{I|L}ATG 11 -1 58.369 0.0 0.0 3.6504 0.0 0.0 393.34091281490606 181.0987490289672 574.4396618438733 0.0 0.0 0.0 0.0 0 0.0 0.0 2.368415180652539 0.0 HE{[SA]|[TG]}AA{I|L}{I|L}ATG 3.6504 - 17167 + 1 1.051 134652.6 1.0 8570 4816 13374 HBL1_DMSO_200M_050219_2,13388 HBL1_DMSO_200M_050219_2,13388, False False ALTGAILAA 70.994542 800.792224109173 0.0 13374.0 ENSG00000134375|ENST00000367287|TIMM17A;;ENST00000482943.1_1_1:201932715-201938679:+|nuORF 3.918545484542847 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13389 71.003 476.0 496400.0 25 0 44433.0 + 21923 LPPHIIRL 8 168 320.2117583217455 957.6134455654365 3 320.2111694216728 MULTI CID FTMS 0 0 0 13374 221880.34375 0.0292872449876623 46 -4.628181457519531 15 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 29.081581746732265 0.4323690340403521 4 {I|L}PPH{I|L}{I|L}R{I|L} 8 0 + 58.097 0.0 0.0 6.0669 6.0669 83.06 0.0 0.0 0.0 46.01900196821623 1.7398322348361577 1.7398322348361577 6.817496819840656 0 0.5189301784845296 1.2218487496163564 0.0 0.3807196863200844 + + {I|L}PPH{I|L}{I|L}R{I|L};{I|L}PP{I|L}H{I|L}R{I|L};{I|L}P{I|L}PH{I|L}R{I|L};{I|L}{I|L}PPH{I|L}R{I|L} 6.0669;5.355;4.643;3.0212 +;-;-;- + 125 + 1 1.051 187601.6 1.0 8571 4816 13374 HBL1_DMSO_200M_050219_2,13389 HBL1_DMSO_200M_050219_2,13389,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13390 71.01 376.0 50773.0 25 0 4520.7 + 14292 IEKLIEKLYVV 11 51 673.9201537966728 0 673.9201537966728 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _IEKLIEKLYVV_ REV__ENSG00000188342|ENST00000340473|GTF2F2 3.2813086475875832 0.4761840153648598 4 A 1 -1 6.9897 0.0 0.0 0.51936 0.0 0.0 1032.66053165957 239.1045321100219 1271.7650637695915 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.51936 - 5 + 1 1.051 21664.8 1.0 8572 4816 13374 HBL1_DMSO_200M_050219_2,13390 HBL1_DMSO_200M_050219_2,13390,IEKLIEKLYVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13392 71.014 0.34 113200000.0 25 0 14556000.0 + 17832 KQLDDLKVEL 10 70 600.8453419844042 1199.6761310356085 2 600.8463622927666 MULTI CID FTMS 0 0 0 13391 137232144.0 0.5106525450379354 2 -0.1528396606445312 1 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 59.05245873256422 0.0390717477387156 4 {NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVE{I|L} 10 4 + 80.52 0.0 0.0 6.7119 6.7119 94.055 0.0 0.0 0.0 18.77513725768253 68.0462187404089 18.77513725768253 80.52046884880937 0 1.1549471895720984 1.3010299956639813 0.7302046884880937 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVE{I|L} 6.7119 - 63 1 1.041 33699.7 1.0 8573 4817 13391 HBL1_DMSO_200M_050219_2,13392 HBL1_DMSO_200M_050219_2,13392,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13393 71.015 0.53 71013000.0 25 0 9898300.0 + 17842 KQLDDLKVEL 10 71 400.8994449725738 1199.6765055179214 3 400.8997070193291 MULTI CID FTMS 0 0 0 13391 75522488.0 0.514533680515851 2 -0.1528396606445312 2 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 35.079672537005266 0.2095246155385646 4 [KQ]{I|L}DD{I|L}K 7 3 40.824 0.0 0.0 3.4029 0.0 0.0 0.0 356.1843539888777 356.1843539888777 26.84431197747243 0.0 0.0 0.0 0 0.5 0.0 0.0 1.0629529932484498 + [KQ]{I|L}DD{I|L}K 3.4029 + + 137 1 1.041 33124.7 1.0 8574 4817 13391 HBL1_DMSO_200M_050219_2,13393 HBL1_DMSO_200M_050219_2,13393,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13394 71.016 8.4 6387400.0 25 0 445050.0 + 3722 DAFRFENV 8 89 499.2410593921415 996.467565851083 2 499.2410766482353 MULTI CID FTMS 0 0 0 13391 3851288.5 1.0 0 0.0 3 Unmodified _DAFRFENV_ ENSG00000070669|ENST00000394308|ASNS;ENST00000495255.1_1_7:97493514-97498468:-|nuORF;nc|ENSG00000070669|P08243-2|ASNS 32.78568957990786 0.3549862272178655 4 PNAV{I|L}RT{I|L} 8 8 38.825 0.0 0.0 3.8963 0.0 0.0 113.93763987003749 0.0 113.93763987003749 0.0 10.26838204007447 0.0 0.0 0 0.0 0.0 0.0 0.0 PNAV{I|L}RT{I|L} 3.8963 - 163 + 1 1.041 48140.3 1.0 8575 4817 13391 HBL1_DMSO_200M_050219_2,13394 HBL1_DMSO_200M_050219_2,13394,DAFRFENV False True DAFRFENV 71.016186 499.241076648235 28550902.0 13391.0 ENST00000495255.1_1_7:97493514-97498468:-|nuORF;;nc|ENSG00000070669|P08243-2|ASNS;;ENSG00000070669|ENST00000394308|ASNS 4.181394179662068 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13395 71.017 20.0 9838600.0 25 0 1038200.0 + 18964 LDENKIGAIP 10 151 535.2982064995323 1068.5818600658645 2 535.2984496951103 MULTI CID FTMS 0 0 0 13391 2655890.25 0.4962750273280203 2 -0.1528396606445312 4 Unmodified _LDENKIGAIP_ ENSG00000188306|ENST00000340806|LRRIQ4 62.57269311338072 0.0298375429882549 4 EVK{I|L}DD{I|L}Q 8 6 110.51 0.0 0.0 10.342 0.0 0.0 0.0 125.07256494693594 125.07256494693594 59.47309787531799 0.0 0.0 0.0 0 2.430884548956689 1.6989700043360187 1.3851518780601924 1.7302046884880935 EVK{I|L}DD{I|L}Q 10.342 - 12661 + 1 1.041 156147.6 1.0 8576 4817 13391 HBL1_DMSO_200M_050219_2,13395 HBL1_DMSO_200M_050219_2,13395,LDENKIGAIP True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13396 71.019 22.0 2268700.0 25 0 131870.0 + 2317 AQIKEMVEL 9 93 530.7892083260439 1059.5638637188877 2 530.7895995974541 MULTI CID FTMS 0 0 0 13391 1186061.75 0.0991934346062857 -3 0.2096328735351562 5 Unmodified _AQIKEMVEL_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 34.93206674587334 0.1032771302489716 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VM 4 6 23.889 0.0 0.0 2.2546 0.0 0.0 0.0 566.2931612604124 566.2931612604124 -1.778259348524358 0.0 -1.778259348524358 0.0 0 0.2742275032520141 1.0969100130080565 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VM 2.2546 - 264 + 1 1.041 46376.4 1.0 8577 4817 13391 HBL1_DMSO_200M_050219_2,13396 HBL1_DMSO_200M_050219_2,13396,AQIKEMVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13397 71.02 75.0 477210.0 25 0 41077.0 19080 LDRLLYPSV 9 68 538.3091964794049 1074.6038400256098 2 538.3099243044853 MULTI CID FTMS 0 0 0 13391 1184228.75 0.96874677257561 -2 0.1633071899414062 6 Unmodified _LDRLLYPSV_ ENST00000372090.5_1_1:45809446-45809527:+|nuORF 3.944395688203298 0.7769873103969335 4 {I|L} 1 8 10.837 0.0 0.0 1.0085 0.0 0.0 943.5090199345926 0.0 943.5090199345926 0.0 0.1241179186251617 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0085 + + 20 + 1 1.041 34869.6 1.0 8578 4817 13391 HBL1_DMSO_200M_050219_2,13397 HBL1_DMSO_200M_050219_2,13397,LDRLLYPSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13398 71.022 81.0 1356600.0 25 0 144850.0 + -1 YSCFESVDY 9 88 585.2287221347873 1168.4428913363745 2 585.2289916872978 MULTI CID FTMS 0 0 0 13391 1086828.875 0.3953518922130878 -3 0.2096328735351562 7 Carbamidomethyl (C) _YSC(Carbamidomethyl (C))FESVDY_ REV__ENSG00000184661|ENST00000330560|CDCA2 15.847184025352805 0.4077185912009129 4 YM{I|L}D 4 -1 55.891 0.0 0.0 4.7833 0.0 0.0 0.0 643.2065977089795 643.2065977089795 37.791681396006 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 YM{I|L}D 4.7833 - 89 + 1 1.041 86005.9 1.0 8579 4817 13391 HBL1_DMSO_200M_050219_2,13398 HBL1_DMSO_200M_050219_2,13398,YSCFESVDY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13399 71.026 213.0 669750.0 25 0 57878.0 + 30905 RISADTIFVTA 11 101 597.3309619750243 1192.6473710168484 2 597.3316528201103 MULTI CID FTMS 0 0 0 13391 949807.875 0.3703051044310802 2 -0.1528396606445312 8 Unmodified _RISGETIFVTA_ ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000070371|P53675-2|CLTCL1 45.60251928735463 0.1419832550123853 4 {[TV]|[{I|L}S]}A[RD]T{I|L}{M(Oxidation (M))|F}VTA 11 4 + 92.032 0.0 0.0 7.7166 7.7166 82.289 0.0 0.0 0.0 12.88460951553904 16.57577319177794 12.88460951553904 2.525749891599532 0 1.0501648626366045 1.5228787452803376 1.0269763493273798 0.7059771852360797 {[TV]|[{I|L}S]}A[RD]T{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}A[QP]{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}A{M(Oxidation (M))|F}[QP]{I|L}{M(Oxidation (M))|F}VTA;[TA]V[RD]T{I|L}{M(Oxidation (M))|F}VTA;[TA]V{M(Oxidation (M))|F}[QP]{I|L}{M(Oxidation (M))|F}VTA;[{M(Oxidation (M))|F}V]TA[QP]{I|L}{M(Oxidation (M))|F}VTA;{[MS]|[{M(Oxidation (M))|F}A]}VT[QP]{I|L}{M(Oxidation (M))|F}VTA;{[TV]|[{I|L}S]}[KT][W{I|L}]{M(Oxidation (M))|F}VEA 7.7166;7.5048;7.2118;6.6362;6.1314;5.7898;4.3817;3.6076 -;-;-;-;-;-;-;- 275 1 1.041 111584.8 1.0 8580 4817 13391 HBL1_DMSO_200M_050219_2,13399 HBL1_DMSO_200M_050219_2,13399,RISGETIFVTA False True RISADTIFVTA 71.026182 597.33165282011 36051328.0 13391.0 ENSG00000070371|ENST00000427926|CLTCL1;;nc|ENSG00000070371|P53675-2|CLTCL1 6.152466297149658 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13400 71.028 94.0 1002000.0 25 0 57148.0 -1 LEELKMAEFL 10 91 413.54812517967474 0 413.5481750369072 PEAK CID FTMS 0 0 0 13391 691050.125 1.0 0 0.0 9 Oxidation (M) _LEELKM(Oxidation (M))AEFL_ ENST00000548092.5_1_12:112563419-112570971:+|nuORF;ENST00000550051.5_1_12:112563419-112579054:+|nuORF 24.881564428377168 0.258953241085865 4 D{I|L}{I|L} 3 -1 9.9215 0.0 0.0 1.2025 0.0 0.0 71.72152875460434 409.1491764536424 480.8707052082468 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L}{I|L} 1.2025 - 73 + 1 1.041 87564.8 1.0 8581 4817 13391 HBL1_DMSO_200M_050219_2,13400 HBL1_DMSO_200M_050219_2,13400,LEELKMAEFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13401 71.034 342.0 2204600.0 25 0 1180900.0 + -1 YMLMCRSFS 9 56 1153.48162594936 1152.47434948276 1 1153.480639636517 MULTI CID FTMS 0 0 0 13391 641798.1875 0.3155162679010083 -3 0.2096328735351562 10 Oxidation (M) _YMLM(Oxidation (M))CRSFS_ REV__chr1:157578542-157578770|25|13.52|0.16|6.37|-|0|FCRL4,FCRL4|1 9.38312468134398 0.5871240394367778 4 YM{I|L}DY 5 -1 39.196 0.0 0.0 3.401 0.0 0.0 0.0 464.1762789361938 464.1762789361938 31.72167511924052 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YM{I|L}DY 3.401 - 36 + 1 1.041 457015.7 1.0 8582 4817 13391 HBL1_DMSO_200M_050219_2,13401 HBL1_DMSO_200M_050219_2,13401,YMLMCRSFS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13402 71.037 125.0 1202900.0 25 0 120850.0 + 33986 SLIKQIPRI 9 142 356.569525552895 1066.6867472588851 3 356.5694457888603 MULTI CID FTMS 0 0 0 13391 539710.0 0.8510315382983212 -1 0.0953598022460937 11 Unmodified _SLIKQIPRI_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 59.36838082759317 0.0264317782606298 4 {[TV]|[{I|L}S]}{I|L}KQ{I|L}{I|L}[RP] 9 2 + 81.265 0.0 0.0 7.6184 7.6184 91.065 0.0 0.0 0.0 58.72511093895924 3.352255868010872 3.352255868010872 9.208187539523747 0 1.1237125054200234 1.6989700043360187 0.0 1.416386562212267 {[TV]|[{I|L}S]}{I|L}KQ{I|L}{I|L}[RP];{[TV]|[{I|L}S]}{I|L}K[AG]{I|L}{I|L}[RP];{[TV]|[{I|L}S]}{I|L}K{I|L}Q{I|L}[RP];{[TV]|[{I|L}S]}{I|L}K{I|L}[AG]{I|L}[RP];{[TV]|[{I|L}S]}{I|L}[{I|L}A][KG]{I|L}[RP];{[TV]|[{I|L}S]}{I|L}K{I|L}R[VP]AA 7.6184;6.7552;6.6558;5.7926;4.7538;3.8202 -;-;-;-;-;- 1264 + 1 1.041 123789.3 1.0 8583 4817 13391 HBL1_DMSO_200M_050219_2,13402 HBL1_DMSO_200M_050219_2,13402,SLIKQIPRI True True SLIKQIPRI 71.037023 356.56944578886 7161858.5 13391.0 ENST00000478340.2_1_6:35437033-35438524:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;;ENSG00000198755|ENST00000322203|RPL10A 2.5171995957692466 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13403 71.042 293.0 672680.0 25 0 51878.0 + 6770 EEADKMFL 8 167 491.7309211433 981.4472893534 2 491.7317993044853 MULTI CID FTMS 0 0 0 13391 532670.3125 0.9760856454318336 -1 0.0953598022460937 12 Unmodified _EEADKMFL_ ENSG00000255302|ENST00000530028|EID1;nc|ENSG00000255302|Q9Y6B2-2|EID1 23.1484247019978 0.5573009939494978 4 EEADKM{M(Oxidation (M))|F}{I|L} 8 0 + 30.532 0.0 0.0 3.1109 3.1109 71.762 0.0 0.0 0.0 16.55246292209256 0.6946030758418154 0.6946030758418154 6.434526764861872 0 0.0 1.5228787452803376 0.0 0.0 + + EEADKM{M(Oxidation (M))|F}{I|L};EEA{I|L}N{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};EEADKM{I|L}{M(Oxidation (M))|F};[VG]SAMQQYV;[VG]SMAQQYV;EEAD[YR]S{I|L};EEW[YR]S{I|L};[QT]{I|L}CQQYV;[VG]SVCQQYV;[AG]T{I|L}CQQYV 3.1109;2.4553;2.3369;2.2616;2.2616;2.0695;2.0298;1.994;1.9302;1.9033 +;-;-;-;-;-;-;-;-;- + 2436 + 1 1.041 150015.0 1.0 8584 4817 13391 HBL1_DMSO_200M_050219_2,13403 HBL1_DMSO_200M_050219_2,13403,EEADKMFL False True EEADKMFL 71.042379 491.731799304485 4806451.5 13391.0 ENSG00000255302|ENST00000530028|EID1;;nc|ENSG00000255302|Q9Y6B2-2|EID1 3.8432226181030273 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13404 71.048 294.0 897180.0 25 0 47073.0 + + 13398 QVCAIIERV 9 210 515.2839663812415 1028.553379829283 2 515.7897216677666 MULTI CID FTMS 0 0 0 13391 516291.0625 0.9612488119164893 -1 0.0953598022460937 13 Unmodified _HLLEEYII_ ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENSG00000184110|ENST00000331666|EIF3C 20.871210003555333 0.6025813472596342 4 [EP]CA{I|L}{I|L}ERV 9 -1 + 37.959 0.0 0.0 3.6905 3.6905 75.284 0.0 0.0 0.0 7.988409243291063 6.210149894766705 6.210149894766705 8.750612633917001 0 0.0 0.0 0.0 0.2887254899964357 [EP]CA{I|L}{I|L}ERV;[EP]CA{I|L}{I|L}[RD]{I|L};H{I|L}S{M(Oxidation (M))|F}K{[RE]|[WV]}{I|L};[EP]CA{I|L}V{[RE]|[WV]}{I|L};H{I|L}S{M(Oxidation (M))|F}K[W{I|L}]V;[QA][NS]{I|L}{I|L}ERV;[EP]V{[MG]|[TS]}{I|L}ERV;[EP]CA{I|L}V[W{I|L}]V;H{I|L}S{M(Oxidation (M))|F}K[NG]KV;H{I|L}S{M(Oxidation (M))|F}[W{I|L}]KV 3.6905;2.8398;2.6552;2.5471;2.4395;2.2193;2.1341;2.0507;2.0201;1.9756 -;-;-;-;-;-;-;-;-;- 3584 + 1 1.041 202494.3 1.0 8585 4817 13391 HBL1_DMSO_200M_050219_2,13404 HBL1_DMSO_200M_050219_2,13404,HLLEEYII False False QVCAIIERV 71.047769 515.789721667767 5666271.0 13391.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 5.122747500737508 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13405 71.053 288.0 642580.0 25 0 51087.0 -1 MCQLLERVP 9 173 552.7804016916143 1103.5462504500283 2 552.7803222537041 MULTI CID FTMS 0 0 0 13391 476170.78125 0.7220666540489326 2 -0.1528396606445312 14 Oxidation (M) _M(Oxidation (M))CQLLERVP_ ENSG00000099364|ENST00000338343|FBXL19;nc|ENSG00000099364|Q6PCT2-2|FBXL19;nc|ENSG00000099364|Q6PCT2-3|FBXL19;nc|ENSG00000099364|Q6PCT2|FBXL19 14.838274106304384 0.4350285940865338 4 [QA][YE]PVER{I|L} 9 -1 + 38.436 0.0 0.0 3.483 3.483 77.658 0.0 0.0 0.0 25.961865649155776 9.078316200367052 9.078316200367052 10.910646070265 0 0.5 0.6989700043360187 0.2887254899964357 0.0 [QA][YE]PVER{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}[SG]PVER{I|L};{[CP]|[EA]}[YQ]PVER{I|L};[QA][TA]{[C(Carbamidomethyl (C))G]|[NC]}VER{I|L};[QA][TA][C(Carbamidomethyl (C))R]ER{I|L};EE{[C(Carbamidomethyl (C))G]|[NC]}{I|L}V[W{I|L}]V;EE{I|L}[C(Carbamidomethyl (C))R]ER{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}[SG]PV[W{I|L}]V;[QA][YE]PT[VP]S{I|L};[QA][YE]PT[VP]TV 3.483;2.4943;2.3347;2.0263;1.4344;1.1901;1.1872;1.0151;0.93474;0.87078 -;-;-;-;-;-;-;-;-;- 909 + 1 1.041 140420.5 1.0 8586 4817 13391 HBL1_DMSO_200M_050219_2,13405 HBL1_DMSO_200M_050219_2,13405,MCQLLERVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13406 71.058 293.0 452020.0 25 0 78438.0 + 44121 YLDFTNPKV 9 109 548.7870438669996 1095.5595348007992 2 548.7863647341728 MULTI CID FTMS 0 0 0 13391 465133.78125 1.0 0 0.0 15 Unmodified _YLDFTNPKV_ ENSG00000214013|ENST00000318010|GANC;ENST00000567421.1_1_15:42570725-42619667:+|nuORF 43.77239144664712 0.0547478964384323 4 Y{I|L}D{M(Oxidation (M))|F}TNPKV 9 0 + 90.72 0.0 0.0 8.2807 8.2807 87.982 0.0 0.0 0.0 79.30030851263416 8.253671847721236 8.253671847721236 5.563025007672877 0 0.8494850021680094 2.0 0.4247425010840047 0.2742275032520141 + + Y{I|L}D{M(Oxidation (M))|F}TNPKV;Y{I|L}D{M(Oxidation (M))|F}TNKPV;Y{I|L}D{M(Oxidation (M))|F}TGGPKV;Y{I|L}D{M(Oxidation (M))|F}TGGKPV;Y{I|L}D{M(Oxidation (M))|F}T[{I|L}P]EV;Y{I|L}D{M(Oxidation (M))|F}T[{I|L}P]D{I|L};Y{I|L}D[HK][QP]PV 8.2807;7.7729;7.4402;6.9324;6.2349;6.2055;3.8248 +;-;-;-;-;-;- + 211 + 1 1.041 103909.0 1.0 8587 4817 13391 HBL1_DMSO_200M_050219_2,13406 HBL1_DMSO_200M_050219_2,13406,YLDFTNPKV True True YLDFTNPKV 71.058448 548.786364734173 4013942.5 13391.0 ENST00000567421.1_1_15:42570725-42619667:+|nuORF;;ENSG00000214013|ENST00000318010|GANC 7.037710666656494 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13407 71.065 336.0 433700.0 25 0 113200.0 + 27436 PIRVRKSV 8 147 477.8139481355121 953.6133433378242 2 477.8137390017509 MULTI CID FTMS 0 0 0 13391 413224.1875 0.8382896352426196 2 -0.1528396606445312 16 Unmodified _PIRVRKSV_ REV__ENSG00000004766|ENST00000305866|VPS50;REV__nc|ENSG00000004766|Q96JG6-3|VPS50 10.183394434864962 0.7604730176254005 4 V 1 -1 11.594 0.0 0.0 1.2158 0.0 0.0 836.533774406475 0.0 836.533774406475 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2158 + + 209 + 1 1.041 111548.2 1.0 8588 4817 13391 HBL1_DMSO_200M_050219_2,13407 HBL1_DMSO_200M_050219_2,13407,PIRVRKSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13408 71.07 305.0 541210.0 25 0 38499.0 + 30916 RIVDVYENL 9 142 560.8021492804182 1119.5897456276364 2 560.8010131716728 MULTI CID FTMS 0 0 0 13391 420942.9375 0.8645049999448059 -1 0.0953598022460937 17 Unmodified _RIVDVYENL_ ENSG00000162889|ENST00000367103|MAPKAPK2;nc|ENSG00000162889|P49137-2|MAPKAPK2 43.77239144664712 0.0547478964384323 4 {NN|[MP]|[D{I|L}]|[EV]}[RV]VYEN{I|L} 9 2 + 76.876 0.0 0.0 6.8664 6.8664 88.977 0.0 0.0 0.0 16.887568628841265 14.973024840566469 14.973024840566469 9.208187539523747 0 0.7302046884880937 1.5228787452803376 0.4916440611282626 1.055462187404089 {NN|[MP]|[D{I|L}]|[EV]}[RV]VYEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]VYEGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]VYDQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]VYDK{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{I|L}YEN{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]VYEN{I|L};{[TV]|[{I|L}S]}V[PS]VYEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]VYD[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]{I|L}{I|L}YEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{I|L}YEGG{I|L} 6.8664;6.044;5.9886;5.9886;5.8769;5.3581;5.3389;5.1662;5.0545;5.0545 -;-;-;-;-;-;-;-;-;- 1870 1 1.041 129245.9 1.0 8589 4817 13391 HBL1_DMSO_200M_050219_2,13408 HBL1_DMSO_200M_050219_2,13408,RIVDVYENL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13409 71.079 417.0 227090.0 25 0 65938.0 -1 0 51 1157.4562867255663 3469.3470307769 3 1158.125170886517 MULTI CID FTMS 0 0 0 13391 299072.28125 0.7348677104774273 3 -0.2544097900390625 18 4 D 1 -1 6.9897 0.0 0.0 0.20147 0.0 0.0 2746.0324688645937 605.2605074518186 3351.2929763164125 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.20147 - 3 + 1 1.041 70116.2 1.0 8590 4817 13391 HBL1_DMSO_200M_050219_2,13409 HBL1_DMSO_200M_050219_2,13409, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13410 71.082 163.0 452850.0 25 0 50801.0 + 14650 IILTTTPIF 9 99 340.2103091614048 0 340.2095825076103 PEAK CID FTMS 0 0 0 13391 376302.34375 1.0 0 0.0 19 Unmodified _IILTTTPIF_ REV__ENSG00000168843|ENST00000306100|FSTL5;REV__nc|ENSG00000168843|Q8N475-2|FSTL5;REV__nc|ENSG00000168843|Q8N475-3|FSTL5 1.1933415558491238 0.3444685223463735 4 Y 1 -1 5.7133 0.0 0.0 0.84217 0.0 0.0 339.23984942456894 173.08254419498283 512.3223936195518 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 Y 0.84217 - 2 + 1 1.041 64545.2 1.0 8591 4817 13391 HBL1_DMSO_200M_050219_2,13410 HBL1_DMSO_200M_050219_2,13410,IILTTTPIF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13411 71.085 157.0 619380.0 25 0 167290.0 + 14535 IGYKIKTLI 9 98 350.2306652788955 1047.6701664368866 3 350.2301818728447 MULTI CID FTMS 0 0 0 13391 359881.65625 0.6836626758190443 -2 0.1633071899414062 20 Unmodified _IGYKIKTLI_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 61.08992128646608 0.0254786290039527 4 {I|L}GYK{I|L}KT{I|L}{I|L} 9 0 + 55.913 0.0 0.0 5.3369 5.3369 88.18 0.0 0.0 0.0 24.16895006820745 14.09256854528806 14.09256854528806 55.91305639150029 0 1.7034021960761268 1.0 0.3807196863200844 0.0 + + {I|L}GYK{I|L}KT{I|L}{I|L} 5.3369 + + 351 + 1 1.041 81825.9 1.0 8592 4817 13391 HBL1_DMSO_200M_050219_2,13411 HBL1_DMSO_200M_050219_2,13411,IGYKIKTLI True True IGYKIKTLI 71.085081 350.230181872845 6121569.5 13391.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1 1.0443371186653774 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13413 71.089 2.0 20440000.0 25 0 3129700.0 + 13252 HIIENIVAV 9 52 504.2977285637242 1006.5809041942484 2 504.2977783083916 MULTI CID FTMS 0 0 0 13412 23478858.0 0.4957099160402218 2 -0.1789703369140625 1 Unmodified _HIIENIVAV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 37.97399986684836 0.0865783450051559 4 [H{I|L}]{I|L}EN{I|L}V{[VA]|[{I|L}G]} 9 0 + 62.91 0.0 0.0 6.2499 6.2499 88.959 0.0 0.0 0.0 22.37643016799588 47.22357194224834 22.37643016799588 13.015384402724592 0 0.5 1.5228787452803376 0.0 0.3807196863200844 + + [H{I|L}]{I|L}EN{I|L}V{[VA]|[{I|L}G]};[H{I|L}]{I|L}EGG{I|L}V{[VA]|[{I|L}G]} 6.2499;4.9568 +;- + 53 1 1.041 38948.5 1.0 8593 4818 13412 HBL1_DMSO_200M_050219_2,13413 HBL1_DMSO_200M_050219_2,13413,HIIENIVAV True True HIIENIVAV 71.089269 504.297778308392 1385192832.0 13412.0 ENSG00000171490|ENST00000571133|RSL1D1;;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;;nc|ENSG00000171490|O76021-2|RSL1D1;;ENST00000574823.5_1_16:11935494-11935832:-|nuORF 7.836229801177978 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13414 71.09 4.6 11952000.0 25 0 1829700.0 + 9116 FFPDKPITQY 10 67 628.3213562907354 1254.6281596482706 2 628.3218261599541 MULTI CID FTMS 0 0 0 13412 10793807.0 0.4496367058744332 3 -0.3407363891601562 2 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 38.17557092003332 0.1768326257063233 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[DP]PT[K{I|L}]QY 10 3 + 29.754 0.0 0.0 2.3715 2.3715 62.238 0.0 0.0 0.0 8.032278864828584 15.070844780971054 8.032278864828584 1.0921451867560172 0 0.3807196863200844 0.0 0.0 0.7742275032520141 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[DP]PT[K{I|L}]QY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[DP]K[{I|L}P]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[DP]P[K{I|L}]TQY;[DP]K[{I|L}P]T[YE][RH] 2.3715;2.2845;2.0446;0.31288 -;+;-;- + 135 + 1 1.041 46365.0 1.0 8594 4818 13412 HBL1_DMSO_200M_050219_2,13414 HBL1_DMSO_200M_050219_2,13414,FFPDKPITQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13415 71.092 10.0 4541200.0 25 0 1057400.0 31788 RSPRGILG 8 62 428.26170747282816 854.5088620124563 2 428.2617370486259 MULTI CID FTMS 0 0 0 13412 5958750.0 0.8503093149521443 1 -0.0774002075195312 3 Unmodified _RSPRGILG_ ENST00000298310.9_1_14:50319457-50319715:-|nuORF 0.0 0.8243325171867699 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 6 1 1.041 40920.7 1.0 8595 4818 13412 HBL1_DMSO_200M_050219_2,13415 HBL1_DMSO_200M_050219_2,13415,RSPRGILG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13416 71.093 13.0 4418600.0 25 0 1145100.0 + 12588 GVIGGDNIRL 10 54 507.290436268224 1012.566319603248 2 507.2906066775322 MULTI CID FTMS 0 0 0 13412 4515445.0 0.8982490544448403 1 -0.0774002075195312 4 Unmodified _GVIGGDNIRL_ ENSG00000108506|ENST00000251334|INTS2;nc|ENSG00000108506|Q9H0H0|INTS2 34.93206674587334 0.2110832994570416 4 [VG]{I|L}GGDN{I|L}R{I|L} 10 0 + 75.123 0.0 0.0 7.4191 7.4191 87.389 0.0 0.0 0.0 60.85348934261106 10.379880530862067 10.379880530862067 6.53212513775344 0 0.8494850021680094 1.6989700043360187 0.0 0.3807196863200844 + + [VG]{I|L}GGDN{I|L}R{I|L};[VG]{I|L}NDN{I|L}R{I|L};[VG]{I|L}GGDGG{I|L}R{I|L};[VG]{I|L}NDGG{I|L}R{I|L} 7.4191;6.774;6.514;5.8646 +;-;-;- + 93 + 1 1.041 49007.9 1.0 8596 4818 13412 HBL1_DMSO_200M_050219_2,13416 HBL1_DMSO_200M_050219_2,13416,GVIGGDNIRL False True GVIGGDNIRL 71.092806 507.290606677532 71873912.0 13412.0 ENSG00000108506|ENST00000251334|INTS2;;nc|ENSG00000108506|Q9H0H0|INTS2 5.6156840324401855 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13417 71.095 102.0 1949900.0 25 0 491860.0 -1 0 56 1144.8079058928845 3431.4018882788537 3 1145.142504870892 MULTI CID FTMS 0 0 0 13412 3965804.5 0.1365685384021699 4 -0.3700408935546875 5 4 E 1 -1 6.9897 0.0 0.0 0.2037 0.0 0.0 2775.172972434696 524.1637153443725 3299.336687779068 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.2037 - 40 + 1 1.041 167527.0 1.0 8597 4818 13412 HBL1_DMSO_200M_050219_2,13417 HBL1_DMSO_200M_050219_2,13417, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13418 71.096 20.0 2025800.0 25 0 465950.0 + 24125 LYPDLVLRT 9 60 545.3171335917162 1088.6197142502324 2 545.3173095583916 MULTI CID FTMS 0 0 0 13412 2543447.5 0.9054769850215848 -2 0.1707992553710937 6 Unmodified _LYPDLVLRT_ REV__ENSG00000239789|ENST00000285298|MRPS17 2.059750862983233 0.8427793054688888 4 R 1 -1 0.59593 0.0 0.0 0.054742 0.0 0.0 850.4775613955434 79.01968561343983 929.4972470089832 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.054742 + + 1 + 1 1.041 40019.8 1.0 8598 4818 13412 HBL1_DMSO_200M_050219_2,13418 HBL1_DMSO_200M_050219_2,13418,LYPDLVLRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13419 71.097 30.0 1618400.0 25 0 397450.0 + 17033 KKKQGGRA 8 56 436.77498351251535 871.5354140918307 2 436.7749206423759 MULTI CID FTMS 0 0 0 13412 1918229.75 0.7004542091370392 3 -0.3407363891601562 7 Unmodified _KKKQGGRA_ REV__ENST00000594671.5_1_19:4675377-4675509:-|nuORF 0.6903765706972694 0.8201419426409876 4 P 1 -1 1.5938 0.0 0.0 0.18287 0.0 0.0 673.4168513250323 98.03803430728748 771.4548856323198 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.18287 - 1 + 1 1.041 42357.7 1.0 8599 4818 13412 HBL1_DMSO_200M_050219_2,13419 HBL1_DMSO_200M_050219_2,13419,KKKQGGRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13420 71.099 32.0 1628600.0 25 0 193980.0 21077 LPAGGILVF 9 80 443.773538906193 885.532524879186 2 443.7736389040947 MULTI CID FTMS 0 0 0 13412 1832313.5 0.1069276628573396 42 -4.273849487304688 8 Unmodified _LPAGGILVF_ ENSG00000150990|ENST00000308736|DHX37 28.17323086031832 0.1727213568982648 4 {I|L}PYV 4 6 56.186 0.0 0.0 6.3448 0.0 0.0 0.0 410.2422579401001 410.2422579401001 40.70107520596089 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PYV 6.3448 - 165 + 1 1.041 46376.8 1.0 8600 4818 13412 HBL1_DMSO_200M_050219_2,13420 HBL1_DMSO_200M_050219_2,13420,LPAGGILVF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13421 71.101 87.0 1490400.0 25 0 209060.0 + 19008 LDKDQLLQLP 10 130 394.89620272000144 1181.6667787602044 3 394.8960754275322 MULTI CID FTMS 0 0 0 13412 956409.1875 0.3560424966737671 3 -0.3407363891601562 9 Unmodified _LDKDQLLQLP_ REV__ENSG00000140600|ENST00000427482|SH3GL3;REV__nc|ENSG00000140600|Q99963-2|SH3GL3;REV__nc|ENSG00000140600|Q99963-3|SH3GL3;REV__nc|ENSG00000140600|Q99963-4|SH3GL3 37.77132515983256 0.1811013699114492 4 [KQ]{I|L}DD{I|L}K 7 -1 61.916 0.0 0.0 5.2397 0.0 0.0 0.0 338.17338136558186 338.17338136558186 16.226255669525344 0.0 0.0 0.0 0 1.5941876774005248 0.0 1.274227503252014 1.0 [KQ]{I|L}DD{I|L}K 5.2397 - 2501 1 1.041 105124.3 1.0 8601 4818 13412 HBL1_DMSO_200M_050219_2,13421 HBL1_DMSO_200M_050219_2,13421,LDKDQLLQLP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13422 71.102 64.0 1096000.0 25 0 61546.0 + 3992 DALRPPLQNI 10 107 568.8248093279032 1135.6350657226062 2 568.8249389529228 MULTI CID FTMS 0 0 0 13412 887807.4375 0.179632234003927 -8 0.68701171875 10 Unmodified _DALRPPLQNI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 71.70789743142352 0.0188816056000227 4 {[DA]|[EG]}{I|L}RP[{I|L}P]GAN{I|L} 11 2 + 64.306 0.0 0.0 5.6625 5.6625 74.114 0.0 0.0 0.0 6.4869252577540095 30.35985407379603 6.4869252577540095 1.804560644581315 0 2.110924374808178 1.5228787452803376 0.0 0.0 {[DA]|[EG]}{I|L}RP[{I|L}P]GAN{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]QN{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]GAGG{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]QGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}ARP[{I|L}P]GAN{I|L};{NN|[MP]|[D{I|L}]|[EV]}ARP[{I|L}P]QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}ARP[{I|L}P]GAGG{I|L};{[DA]|[EG]}{I|L}RKP[KP][DP];{NN|[MP]|[D{I|L}]|[EV]}ARP[{I|L}P]QGG{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]G{I|L}{[QG]|[NA]} 5.6625;5.5036;4.8587;4.6966;4.6092;4.4502;3.8053;3.7716;3.6433;3.5172 -;+;-;-;-;-;-;-;-;- + 599 1 1.041 58822.1 1.0 8602 4818 13412 HBL1_DMSO_200M_050219_2,13422 HBL1_DMSO_200M_050219_2,13422,DALRPPLQNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13423 71.104 99.0 1137000.0 25 0 72802.0 + 12114 GQIEVVPEV 9 130 485.265874949944 968.517196966688 2 485.2660400271416 MULTI CID FTMS 0 0 0 13412 850438.9375 0.1881302914060978 3 -0.3407363891601562 11 Unmodified _GQIEVVPEV_ ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3 62.57269311338072 0.0246576765497938 4 {NN|[MP]|[D{I|L}]|[EV]}QAVV 6 6 40.695 0.0 0.0 4.2018 0.0 0.0 0.0 340.1510830353005 340.1510830353005 9.994878718212597 0.0 0.0 0.0 0 0.8807196863200843 0.8538719643217619 0.5994850021680094 0.7510912013506126 {NN|[MP]|[D{I|L}]|[EV]}QAVV 4.2018 - 804 1 1.041 91798.2 1.0 8603 4818 13412 HBL1_DMSO_200M_050219_2,13423 HBL1_DMSO_200M_050219_2,13423,GQIEVVPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13424 71.11 289.0 691880.0 25 0 37479.0 + 17386 KMIEDLQNEL 10 148 616.8132268869591 1231.611900840718 2 616.8135253787041 MULTI CID FTMS 0 0 0 13412 723648.6875 0.0894799104469731 -3 0.2387466430664062 12 Unmodified _KMIEDLQNEL_ ENSG00000198887|ENST00000361138|SMC5 133.0521902211835 0.0002107067494628 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QNE{I|L} 10 0 + 104.93 0.0 0.0 8.5196 8.5196 87.738 0.0 0.0 0.0 4.8626502942173175 16.53212513775344 4.8626502942173175 4.8626502942173175 0 0.6237125054200234 0.0 2.2034021960761265 1.9489700043360187 + + {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QNE{I|L};{NN|[MP]|[D{I|L}]|[EV]}EMK{I|L}QNE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}EDQ{I|L}NE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}MK{I|L}QNE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QGGE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}[AG]NE{I|L};{NN|[MP]|[D{I|L}]|[EV]}EMKQ{I|L}NE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}MKQ{I|L}NE{I|L};{NN|[MP]|[D{I|L}]|[EV]}EMK{I|L}[AG]NE{I|L};{NN|[MP]|[D{I|L}]|[EV]}EMK{I|L}QGGE{I|L} 8.5196;8.1247;8.115;7.9243;7.7754;7.7754;7.7201;7.5197;7.3806;7.3806 +;-;-;-;-;-;-;-;-;- + 26141 1 1.041 154566.9 1.0 8604 4818 13412 HBL1_DMSO_200M_050219_2,13424 HBL1_DMSO_200M_050219_2,13424,KMIEDLQNEL True True KMIEDLQNEL 71.109546 616.813525378704 218708232.0 13412.0 ENSG00000198887|ENST00000361138|SMC5 4.756479899088542 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13425 71.112 105.0 768280.0 25 0 75870.0 + + 39637 DVHIQINSI 9 110 519.7818008214268 1037.5490487096536 2 519.7811157107353 MULTI CID FTMS 0 0 0 13412 594304.0 0.7521541785455571 -1 0.075439453125 13 Unmodified _VDTYKRGSL_ nc|ENSG00000189050|Q5M7Z0-3|RNFT1;ENST00000477207.2_1_17:58039882-58042045:-|nuORF;nc|ENSG00000189050|Q5M7Z0-2|RNFT1;ENSG00000189050|ENST00000305783|RNFT1;ENST00000586083.5_1_17:58037427-58042045:-|nuORF 43.85829265575387 0.0542763391141878 4 [HV]D{I|L}Q{I|L}NS{I|L} 9 -1 + 64.435 0.0 0.0 6.2103 6.2103 78.434 0.0 0.0 0.0 5.855931671512877 14.973024840566469 5.855931671512877 3.0102999566398125 0 0.9247425010840048 0.6989700043360187 0.2614393726401688 0.0 [HV]D{I|L}Q{I|L}NS{I|L};[HV]D{I|L}{I|L}QNS{I|L};{[TV]|[{I|L}S]}[YT]Q{I|L}NS{I|L};{[TV]|[{I|L}S]}[YT]{I|L}QNS{I|L};[HV]D{I|L}[AG]{I|L}NS{I|L};[HV]D{I|L}Q{I|L}GGS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]Q{I|L}NS{I|L};[HV]D{I|L}{I|L}[AG]NS{I|L};[HV]D{I|L}{I|L}QGGS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}QNS{I|L} 6.2103;5.9202;5.6459;5.3558;5.3228;5.3228;5.2912;5.0327;5.0327;5.0011 -;-;-;-;-;-;-;-;-;- 866 1 1.041 66300.0 1.0 8605 4818 13412 HBL1_DMSO_200M_050219_2,13425 HBL1_DMSO_200M_050219_2,13425,VDTYKRGSL False False DVHIQINSI 71.1118 519.781115710735 5412049.0 13412.0 nc|ENSG00000189050|Q5M7Z0-3|RNFT1;;ENST00000477207.2_1_17:58039882-58042045:-|nuORF;;nc|ENSG00000189050|Q5M7Z0-2|RNFT1;;ENSG00000189050|ENST00000305783|RNFT1;;ENST00000586083.5_1_17:58037427-58042045:-|nuORF 4.4664357503255205 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13426 71.119 388.0 489890.0 25 0 49645.0 + 44438 YMIDPSGVSY 10 165 574.251496211178 1146.488439489156 2 574.2527953982353 MULTI CID FTMS 0 0 0 13412 377751.625 0.3031680726669276 -5 0.4232406616210937 14 Oxidation (M) _YM(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 78.14939416004806 0.0185844602684931 4 [VS]GPY{M(Oxidation (M))|F}EVSY 10 7 + 57.578 0.0 0.0 5.0221 5.0221 71.922 0.0 0.0 0.0 2.155998003393549 16.532125137753432 2.155998003393549 2.155998003393549 0 0.5 1.0969100130080565 0.9247425010840048 0.0 [VS]GPY{M(Oxidation (M))|F}EVSY;[VG]SPY{M(Oxidation (M))|F}EVSY;[PS]GVY{M(Oxidation (M))|F}EVSY;[VS]GYP{M(Oxidation (M))|F}EVSY;[{M(Oxidation (M))|F}V]EK{M(Oxidation (M))|F}EVSY;[VG]SYP{M(Oxidation (M))|F}EVSY;[DP]YK{M(Oxidation (M))|F}EVSY;[DP]KY{M(Oxidation (M))|F}EVSY;[VS]GPDYPYSY;{[QD]|[EN]|[WG]|[KD]|[RS]}PY{M(Oxidation (M))|F}EVSY 5.0221;4.834;4.594;4.497;4.316;4.3089;4.2999;4.2999;4.2355;4.2327 -;-;-;-;-;-;-;-;-;- 5600 1 1.041 145937.1 1.0 8606 4818 13412 HBL1_DMSO_200M_050219_2,13426 HBL1_DMSO_200M_050219_2,13426,YMIDPSGVSY True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13427 71.122 141.0 597240.0 25 0 70637.0 + 39262 VAAPPSIQI 9 119 448.2660498144704 894.5175466957409 2 448.2665588259697 MULTI CID FTMS 0 0 0 13412 366103.5625 0.3303596404790845 3 -0.3407363891601562 15 Unmodified _VAAPPSIQI_ ENSG00000119650|ENST00000314067|IFT43;nc|ENSG00000119650|Q96FT9-2|IFT43 54.773552608820026 0.0299037012502309 4 {[VA]|[{I|L}G]}AG 4 6 23.984 0.0 0.0 2.6812 0.0 0.0 0.0 593.3297164557596 593.3297164557596 -0.3964026235216877 0.0 -0.3964026235216877 0.0 0 0.4247425010840047 1.154901959985743 0.0 0.0 {[VA]|[{I|L}G]}AG 2.6812 - 228 1 1.041 70905.8 1.0 8607 4818 13412 HBL1_DMSO_200M_050219_2,13427 HBL1_DMSO_200M_050219_2,13427,VAAPPSIQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13428 71.131 510.0 535950.0 25 0 34804.0 + 41485 VPLTLSGLL 9 198 456.7920283220957 911.5695037109914 2 456.7922241091728 MULTI CID FTMS 0 0 0 13412 285073.90625 0.8475785467703504 1 -0.0774002075195312 16 Unmodified _VPLTLSGLL_ nc|ENSG00000179915|P58400-1|NRXN1;nc|ENSG00000179915|P58400|NRXN1 57.47134341890925 0.0274820932774257 4 {I|L}PV{I|L}TEK{I|L} 8 6 + 83.891 0.0 0.0 9.2029 9.2029 95.922 0.0 0.0 0.0 33.3994806169435 13.34565870734916 13.34565870734916 13.34565870734916 0 1.4436726795685342 1.6989700043360187 1.0629529932484498 0.0 {I|L}PV{I|L}TEK{I|L};{I|L}PV{I|L}TE{I|L}K;{I|L}PV{I|L}T[{I|L}T]GV;[{I|L}P]VTKE{I|L}{I|L};[VP]{I|L}TKE{I|L}{I|L};[{I|L}P]VT{I|L}[SG]{I|L}{I|L};{I|L}{I|L}T{I|L}DPK{I|L};{I|L}{I|L}[VP]TEK{I|L};[VP]{I|L}T{I|L}[SG]{I|L}{I|L};{I|L}{I|L}TD{I|L}PK{I|L} 9.2029;7.7389;6.9355;6.2429;5.914;5.2891;5.2257;5.1262;4.9603;4.9591 -;-;-;-;-;-;-;-;+;- + 2464 + 1 1.041 207858.9 1.0 8608 4818 13412 HBL1_DMSO_200M_050219_2,13428 HBL1_DMSO_200M_050219_2,13428,VPLTLSGLL True False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13429 71.139 475.0 248080.0 25 0 26428.0 + 2301 AQIEAKFYEEV 11 139 663.8326608174027 1325.650768701605 2 664.3362304568291 MULTI CID FTMS 0 0 0 13412 233797.515625 0.5598093039505151 -1 0.075439453125 17 Unmodified _AQIEAKFYEEV_ ENSG00000187109|ENST00000618691|NAP1L1;ENST00000549988.5_1_12:76453547-76478450:-|nuORF;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1 57.2037768669896 0.0804934932440564 4 [QA]{I|L}YYE{I|L}EQVA 11 7 + 73.384 0.0 0.0 5.5357 5.5357 74.0 0.0 0.0 0.0 13.84831439348352 12.547284427554274 12.547284427554274 2.04628427264403 0 1.0206673934733614 0.7695510786217261 0.7302046884880937 0.6989700043360187 [QA]{I|L}YYE{I|L}EQVA;[QA]{I|L}Y{I|L}YEEQVA;[QA]{I|L}YY{I|L}EEQVA;[QA]{I|L}EYY{I|L}EQVA;[AG]A{I|L}YYE{I|L}EQVA;[QA]{I|L}Y{I|L}Y[QA]E{NN|[MP]|[D{I|L}]|[EV]};[AG]A{I|L}Y{I|L}YEEQVA;[QA]{I|L}YYE{I|L}[QA]{NN|[MP]|[D{I|L}]|[EV]};[QA]{I|L}Y{I|L}YE[QA]{NN|[MP]|[D{I|L}]|[EV]};[QA]{I|L}Y{I|L}[C(Carbamidomethyl (C))N]{M(Oxidation (M))|F}QVA 5.5357;5.3813;5.0214;4.622;4.4911;4.3689;4.3367;4.3327;4.1784;4.1574 -;-;-;-;-;-;-;-;-;- 7872 1 1.041 91319.1 1.0 8609 4818 13412 HBL1_DMSO_200M_050219_2,13429 HBL1_DMSO_200M_050219_2,13429,AQIEAKFYEEV True True AQIEAKFYEEV 71.138995 663.8352 4084656.5 13412.0 ENST00000549988.5_1_12:76453547-76478450:-|nuORF;;nc|ENSG00000187109|P55209-3|NAP1L1;;ENST00000550917.1_1_12:32879649-32880297:-|nuORF;;ENSG00000187109|ENST00000618691|NAP1L1;;nc|ENSG00000187109|P55209-2|NAP1L1 6.714549541473389 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13430 71.147 474.0 341880.0 25 0 24757.0 + 2173 AQAEVYKELRL 11 125 660.369825381552 1318.725097829904 2 660.3694335818291 MULTI CID FTMS 0 0 0 13412 236804.0625 0.7257611281591559 -1 0.075439453125 18 Unmodified _AQAEVYKELRL_ ENSG00000169710|ENST00000306749|FASN 74.21552131080927 0.0201879545523286 4 AQAEVYKE{I|L}R{I|L} 11 0 + 104.91 0.0 0.0 7.9551 7.9551 94.613 0.0 0.0 0.0 85.24073301726435 12.060323256818208 12.060323256818208 14.814860601221111 0 2.548455006504028 0.5686362358410126 0.0 0.805462187404089 + + AQAEVYKE{I|L}R{I|L};A[AG]AEVYKE{I|L}R{I|L};AQAEVY{I|L}[SG]{I|L}R{I|L};AQAEV{I|L}Y[SG]{I|L}R{I|L};AQ{I|L}{[DA]|[EG]}YKE{I|L}R{I|L};A[AG]AEVY{I|L}[SG]{I|L}R{I|L};A[AG]AEV{I|L}Y[SG]{I|L}R{I|L};AQAEV{I|L}[{I|L}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L};AQAEV{I|L}[HK]EVPV;A[AG]{I|L}{[DA]|[EG]}YKE{I|L}R{I|L} 7.9551;6.8317;6.6221;6.6018;5.832;5.501;5.4806;4.8534;4.7318;4.7086 +;-;-;-;-;-;-;-;-;- + 858 + 1 1.041 120036.4 1.0 8610 4818 13412 HBL1_DMSO_200M_050219_2,13430 HBL1_DMSO_200M_050219_2,13430,AQAEVYKELRL True True AQAEVYKELRL 71.147389 660.369433581829 8091932.375 13412.0 ENSG00000169710|ENST00000306749|FASN 6.792015552520752 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13431 71.151 174.0 511760.0 25 0 78878.0 + + 6013 NSALVLKV 8 110 422.7606975845608 0 422.7606384158134 PEAK CID FTMS 0 0 0 13412 208420.78125 0.7616772084243917 1 -0.0774002075195312 19 Unmodified _DSALLKVV_ ENSG00000139687|ENST00000267163|RB1;ENST00000525036.1_1_13:48877982-48934322:+|nuORF 50.855029805455786 0.1048788807644274 4 A{I|L}V{I|L}K 5 -1 29.612 0.0 0.0 3.5106 0.0 0.0 202.0604443861153 114.05677972965076 316.1172241157661 0.0 0.0 0.0 0.0 0 0.8371804965004639 0.0 0.0 0.1861818737241735 A{I|L}V{I|L}K 3.5106 - 181 + 1 1.041 72568.4 1.0 8611 4818 13412 HBL1_DMSO_200M_050219_2,13431 HBL1_DMSO_200M_050219_2,13431,DSALLKVV False False NSALVLKV 71.150764 422.760638415813 0.0 13412.0 ENSG00000139687|ENST00000267163|RB1;;ENST00000525036.1_1_13:48877982-48934322:+|nuORF 4.327853520711263 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13432 71.162 600.0 300370.0 25 0 70845.0 -1 0 76 1172.793346285698 0 1172.795458972454 PEAK CID FTMS 0 0 0 13412 196509.734375 0.7915285839942924 -1 0.075439453125 20 4 YC(Carbamidomethyl (C)) 2 -1 9.464 0.0 0.0 0.40383 0.0 0.0 314.71852049928185 1702.7525118463502 2017.471032345632 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YC(Carbamidomethyl (C)) 0.40383 - 37 + 1 1.041 128241.4 1.0 8612 4818 13412 HBL1_DMSO_200M_050219_2,13432 HBL1_DMSO_200M_050219_2,13432, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13434 71.167 2.0 23025000.0 25 0 3236300.0 + 44434 YMIDPSGVSY 10 61 566.2549721209491 1130.495391308698 2 566.2555419802666 MULTI CID FTMS 0 0 0 13433 24893002.0 0.7625939502620783 -1 0.0774002075195312 1 Unmodified _YMIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 30.63653989081413 0.2803493085145199 4 [PS]KY[C(Carbamidomethyl (C))Q]VSY 9 7 [PS]KY[C(Carbamidomethyl (C))Q]V + + 28.856 -1.7955 -0.2082 2.5525 2.5525 45.167 0.0 0.0 0.0 0.0 16.616786628205674 0.0 0.0 0 0.5 0.0 0.2887254899964357 0.0 [PS]KY[C(Carbamidomethyl (C))Q]VSY 2.5525 - 174 + 1 1.038 40917.9 1.0 8613 4819 13433 HBL1_DMSO_200M_050219_2,13434 HBL1_DMSO_200M_050219_2,13434,YMIDPSGVSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13435 71.168 15.0 2716800.0 25 0 277560.0 + 170 AAMEDLTRL 9 67 510.26302615118016 1018.5114993691604 2 510.2631713747978 MULTI CID FTMS 0 0 0 13433 2519625.25 0.5151336367485572 1 -0.1015701293945312 2 Unmodified _AAMEDLTRL_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000523646.1_1_8:109240494-109241379:-|nuORF 31.26834338654808 0.1333407332142048 4 AAMED{I|L}TR{I|L} 9 0 + 69.088 0.0 0.0 6.7832 6.7832 94.237 0.0 0.0 0.0 58.118932666592485 8.197859905088634 8.197859905088634 69.08803279667305 0 0.7302046884880937 1.6989700043360187 0.4247425010840047 0.0 + + AAMED{I|L}TR{I|L} 6.7832 + + 39 + 1 1.038 37911.5 1.0 8614 4819 13433 HBL1_DMSO_200M_050219_2,13435 HBL1_DMSO_200M_050219_2,13435,AAMEDLTRL False True AAMEDLTRL 71.167847 510.263171374798 67968160.0 13433.0 ENST00000523646.1_1_8:109240494-109241379:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 6.5947794914245605 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13436 71.169 12.0 4195200.0 25 0 509170.0 + 4971 DGRIFGESI 9 73 497.2540729310402 992.4935929288804 2 497.2540771365166 MULTI CID FTMS 0 0 0 13433 4439870.5 0.3759407577984369 -1 0.0774002075195312 3 Unmodified _DGRIFGESI_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35;nc|ENSG00000163002|Q8NFH5-3|NUP35 34.93206674587334 0.1032771302489716 4 {I|L}{M(Oxidation (M))|F}GES{I|L} 6 3 57.211 0.0 0.0 5.7644 0.0 0.0 328.15098769355626 0.0 328.15098769355626 0.0 20.83613437787733 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + {I|L}{M(Oxidation (M))|F}GES{I|L} 5.7644 + + 213 1 1.038 45192.3 1.0 8615 4819 13433 HBL1_DMSO_200M_050219_2,13436 HBL1_DMSO_200M_050219_2,13436,DGRIFGESI True True DGRIFGESI 71.169026 497.254077136517 174759280.0 13433.0 ENSG00000163002|ENST00000295119|NUP35;;nc|ENSG00000163002|Q8NFH5-2|NUP35;;nc|ENSG00000163002|Q8NFH5-3|NUP35 5.181456565856934 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13437 71.17 21.0 2395900.0 25 0 292420.0 44460 YMVYMFHY 8 62 577.2456956909966 1152.4768384487932 2 577.2460204958916 MULTI CID FTMS 0 0 0 13433 1494685.75 0.4765751149819768 -1 0.0774002075195312 4 Unmodified _YMVYMFHY_ ENST00000509325.1_1_12:7719006-7719195:+|nuORF 17.086550045450526 0.6584923310065985 4 YM{I|L}DY[QA]SY 9 5 + 79.988 0.0 0.0 6.9406 6.9406 92.749 0.0 0.0 0.0 68.22228114217921 14.09256854528806 14.09256854528806 19.648415687162952 0 1.2302046884880935 1.6989700043360187 0.2614393726401688 0.0 YM{I|L}DY[QA]SY;YM{I|L}D[NS][{M(Oxidation (M))|F}T]Y;Y{M(Oxidation (M))|F}PDY[QA]SY;YM{I|L}[C(Carbamidomethyl (C))R][{M(Oxidation (M))|F}T]Y;YE{[ET]|[MV]}Y[QA]SY;YE[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[QA]SY;Y{M(Oxidation (M))|F}PD[NS][{M(Oxidation (M))|F}T]Y;Y{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[QA]SY;Y{M(Oxidation (M))|F}P[C(Carbamidomethyl (C))R][{M(Oxidation (M))|F}T]Y;[HM][RN]{M(Oxidation (M))|F}[QA]SY 6.9406;5.2357;4.4913;4.2397;3.6003;2.9052;2.7864;2.4305;1.7905;0.73096 -;-;-;-;-;-;-;-;-;- 152 + 1 1.038 44068.2 1.0 8616 4819 13433 HBL1_DMSO_200M_050219_2,13437 HBL1_DMSO_200M_050219_2,13437,YMVYMFHY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13438 71.172 54.0 1482600.0 25 0 138510.0 + 35593 STVEALQNL 9 116 487.7612862354965 973.5080195377932 2 487.7613098025322 MULTI CID FTMS 0 0 0 13433 1139140.875 0.5291668916741428 1 -0.1015701293945312 5 Unmodified _STVEALQNL_ ENSG00000143401|ENST00000583931|ANP32E;nc|ENSG00000143401|Q9BTT0-3|ANP32E 67.34385681178166 0.0221257235307089 4 {NN|[MP]|[D{I|L}]|[EV]}TSA{I|L} 6 6 34.111 0.0 0.0 3.504 0.0 0.0 0.0 370.1726673251556 370.1726673251556 10.595647383552311 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.3145152305677004 0.2887254899964357 {NN|[MP]|[D{I|L}]|[EV]}TSA{I|L} 3.504 - 1045 1 1.038 65958.7 1.0 8617 4819 13433 HBL1_DMSO_200M_050219_2,13438 HBL1_DMSO_200M_050219_2,13438,STVEALQNL True True STVEALQNL 71.171581 487.761309802532 15302289.0 13433.0 nc|ENSG00000143401|Q9BTT0-3|ANP32E;;ENSG00000143401|ENST00000583931|ANP32E 5.221341451009114 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13439 71.173 33.0 2202800.0 25 0 209090.0 + -1 IPFSNPRVL 9 95 522.2951522026177 1042.575751472035 2 522.2949096560478 MULTI CID FTMS 0 0 0 13433 1063662.875 0.7564079041944698 2 -0.263336181640625 6 Oxidation (M) _M(Oxidation (M))FHKLRPV_ nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF 5.760428011301431 0.7893668129297577 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DY 4 -1 15.864 0.0 0.0 1.5216 0.0 0.0 0.0 517.330792325804 517.330792325804 1.426675035687314 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DY 1.5216 - 60 1 1.038 60918.9 1.0 8618 4819 13433 HBL1_DMSO_200M_050219_2,13439 HBL1_DMSO_200M_050219_2,13439,MFHKLRPV False False IPFSNPRVL 71.17276 522.294909656048 4942154.5 13433.0 nc|ENSG00000022556|Q9NX02-4|NLRP2;;nc|ENSG00000022556|Q9NX02-3|NLRP2;;nc|ENSG00000022556|Q9NX02-2|NLRP2;;nc|ENSG00000022556|Q9NX02-5|NLRP2;;ENSG00000022556|ENST00000448584|NLRP2;;ENST00000540597.5_1_19:55476735-55501561:+|nuORF 2.778038104375204 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13440 71.176 158.0 1135700.0 25 0 255760.0 + 4942 DGLVLVKV 8 122 421.77107342454485 841.5275939158897 2 421.7709228396416 MULTI CID FTMS 0 0 0 13433 689728.8125 0.161535294643222 -2 0.1528396606445312 7 Unmodified _DGLVLVKV_ REV__ENSG00000144840|ENST00000273375|RABL3;REV__ENST00000491398.5_1_3:120457479-120461354:-|nuORF 64.23631603340823 0.116217441302575 4 [DG]{I|L}V{I|L}VKV 8 -1 + 72.524 0.0 0.0 8.6181 8.6181 89.005 0.0 0.0 0.0 20.0 6.020599913279625 6.020599913279625 6.020599913279625 0 1.274227503252014 1.3010299956639813 0.0 0.2614393726401688 [DG]{I|L}V{I|L}VKV;[DG]{I|L}V{I|L}VVK;[DG]V{I|L}{I|L}VKV;[DG]{I|L}VV{I|L}KV;[DG]V{I|L}{I|L}VVK;[DG]{I|L}VV{I|L}VK;[DG]V{I|L}V{I|L}KV;[DG]V{I|L}V{I|L}VK 8.6181;7.9027;7.7556;7.3979;7.0402;6.6825;6.5355;5.82 +;-;-;-;-;-;-;- + 304 + 1 1.038 143905.1 1.0 8619 4819 13433 HBL1_DMSO_200M_050219_2,13440 HBL1_DMSO_200M_050219_2,13440,DGLVLVKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13441 71.179 136.0 953680.0 25 0 103710.0 + 38312 TQILSVPKV 9 118 492.8082487505911 983.6019445679822 2 492.8083984255791 MULTI CID FTMS 0 0 0 13433 652321.5 0.2888694067024748 -4 0.3161468505859375 8 Unmodified _TQILSVPKV_ nc|ENSG00000120802|P42166|TMPO 41.95555342248728 0.0647214845423414 4 [QT]{I|L}{I|L}SVPKV 9 0 + 53.712 0.0 0.0 5.4608 5.4608 79.104 0.0 0.0 0.0 41.23803406644164 2.161046520583554 2.161046520583554 5.547261125323324 0 0.9247425010840048 1.0457574905606752 0.0 0.0 + + [QT]{I|L}{I|L}SVPKV;[QT]{I|L}{I|L}SVV[KP];{I|L}{I|L}SKS{I|L}{I|L}[NP];[K{I|L}]TVS{I|L}{I|L}[NP];[QT]{I|L}{I|L}SK[VP]V;{[TV]|[{I|L}S]}{I|L}KS{I|L}{I|L}[NP] 5.4608;4.8968;4.3725;3.9003;3.8605;3.3178 +;-;-;-;-;- + 213 + 1 1.038 106102.9 1.0 8620 4819 13433 HBL1_DMSO_200M_050219_2,13441 HBL1_DMSO_200M_050219_2,13441,TQILSVPKV True True TQILSVPKV 71.178635 492.808398425579 77538744.0 13433.0 nc|ENSG00000120802|P42166|TMPO 5.8618394533793134 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13442 71.18 29.0 1056100.0 25 0 68663.0 + 25075 MPVIPMNTI 9 74 516.2672060212747 1030.5198591093492 2 516.2670776247978 MULTI CID FTMS 0 0 0 13433 591076.375 0.3403617690392436 -5 0.3624725341796875 9 Oxidation (M) _MPVIPM(Oxidation (M))NTI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 42.09456458481378 0.0639583784996157 4 [VP]M{I|L} 4 5 23.142 0.0 0.0 2.2457 0.0 0.0 0.0 587.2500586545242 587.2500586545242 0.1269422465113834 0.0 0.0 0.0 0 0.4247425010840047 0.721246399047171 0.0 0.0 [VP]M{I|L} 2.2457 - 74 1 1.038 30437.5 1.0 8621 4819 13433 HBL1_DMSO_200M_050219_2,13442 HBL1_DMSO_200M_050219_2,13442,MPVIPMNTI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13443 71.184 220.0 463250.0 25 0 73763.0 29233 QGSYSYSNSY 10 121 385.825329714829 1154.454159744687 3 385.8251830935478 MULTI CID FTMS 0 0 0 13433 513904.875 0.8576488873586127 -1 0.0774002075195312 10 Unmodified _QGSYSYSNSY_ ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10794459-10799985:+|nuORF;ENST00000591649.5_1_19:10797828-10799985:+|nuORF;nc|ENSG00000129351|Q12906|ILF3 16.149105407346934 0.5765757077271437 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}DQ 5 9 23.403 0.0 0.0 2.0272 0.0 0.0 0.0 501.1598231570496 501.1598231570496 4.462724883926658 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}DQ 2.0272 - 725 1 1.038 90215.8 1.0 8622 4819 13433 HBL1_DMSO_200M_050219_2,13443 HBL1_DMSO_200M_050219_2,13443,QGSYSYSNSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13444 71.187 148.0 901580.0 25 0 58982.0 + 2321 AQIKPFYTV 9 143 533.8004134669928 1065.5862740007856 2 533.8004028201103 MULTI CID FTMS 0 0 0 13433 444990.96875 0.2828173268850733 -2 0.1528396606445312 11 Unmodified _AQIKPFYTV_ ENSG00000155096|ENST00000337198|AZIN1;ENST00000522311.1_1_8:103848756-103855898:-|nuORF 71.92227651296345 0.0203558744033348 4 [QA]{I|L}K{[YC]|[HE]}NKV 9 4 + 36.089 0.0 0.0 3.3867 3.3867 65.968 0.0 0.0 0.0 4.701681228899595 6.634344747112383 4.701681228899595 1.9757601677798675 0 1.0 0.744727494896694 0.7302046884880937 0.25 [QA]{I|L}K{[YC]|[HE]}NKV;[QA]{I|L}K[HN][VG]TV;[QA]{I|L}K[HN]EKV;[QA]{I|L}K[YV]V{M(Oxidation (M))|F}V;[QA][HA]K{I|L}[QA]TV;[QA]{I|L}K{[YC]|[HE]}GGKV;[QA]{I|L}K[HN][VG]S{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YK{I|L}[QA]TV;[QA]{I|L}K[HN]S{I|L}GV;[QA][HA]TVV{I|L}EV 3.3867;3.2013;2.8696;2.5652;2.5245;2.5226;2.5065;2.2127;2.1874;2.1421 -;-;-;-;-;-;-;-;-;- 1627 + 1 1.038 108119.6 1.0 8623 4819 13433 HBL1_DMSO_200M_050219_2,13444 HBL1_DMSO_200M_050219_2,13444,AQIKPFYTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13445 71.194 420.0 648860.0 25 0 46369.0 -1 SSMCDFRCY 9 222 592.711288366528 1183.408023799856 2 593.2136108279228 MULTI CID FTMS 0 0 0 13433 384626.09375 0.7722709463623965 -1 0.0774002075195312 12 Carbamidomethyl (C),Oxidation (M) _SSM(Oxidation (M))C(Carbamidomethyl (C))DFRCY_ ENST00000369393.7_1_6:90395569-90395641:-|nuORF 7.910154910731844 0.6385446671287552 4 QEE{M(Oxidation (M))|F}[RV]Y 7 -1 28.677 0.0 0.0 2.4232 0.0 0.0 213.95112534355945 0.0 213.95112534355945 0.0 14.072676071743755 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 QEE{M(Oxidation (M))|F}[RV]Y 2.4232 - 534 + 1 1.038 195596.0 1.0 8624 4819 13433 HBL1_DMSO_200M_050219_2,13445 HBL1_DMSO_200M_050219_2,13445,SSMCDFRCY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13446 71.202 448.0 649720.0 25 0 77255.0 + 24308 MDIVKVQSL 9 226 524.7909100002169 1047.5672670672336 2 524.7889892458916 MULTI CID FTMS 0 0 0 13433 369604.9375 0.1979897624964804 5 -0.5701828002929688 13 Oxidation (M) _M(Oxidation (M))DIVKVQSL_ REV__ENSG00000100109|ENST00000407690|TFIP11 53.832793166522166 0.0319663582346103 4 [{I|L}P]QYTVQS{I|L} 9 -1 + 58.901 0.0 0.0 5.6226 5.6226 70.632 0.0 0.0 0.0 0.2020338608828709 19.01872575287669 0.2020338608828709 0.2020338608828709 0 0.9247425010840048 0.8538719643217619 1.2971062485323517 0.2614393726401688 [{I|L}P]QYTVQS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QTVQS{I|L};{[TV]|[{I|L}S]}QHHVQS{I|L};[{I|L}P]QTYVQS{I|L};[AG]{I|L}PYTVQS{I|L};{[QN]|[E{I|L}]|[KN]}KMTVQS{I|L};[AG]{I|L}PTYVQS{I|L};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}MTVQS{I|L};{[VA]|[{I|L}G]}APYTVQS{I|L};{[VA]|[{I|L}G]}APTYVQS{I|L} 5.6226;5.6034;5.5657;5.5252;5.5151;5.4841;5.4176;5.2998;5.2584;5.161 -;-;-;-;-;-;-;-;-;- 4236 1 1.038 225255.8 1.0 8625 4819 13433 HBL1_DMSO_200M_050219_2,13446 HBL1_DMSO_200M_050219_2,13446,MDIVKVQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13447 71.21 439.0 292560.0 25 0 37426.0 -1 VMKLLRMALS 10 144 589.3429844827069 1176.6714160322138 2 589.3439208865166 MULTI CID FTMS 0 0 0 13433 334168.125 0.3165403115879771 -13 1.1935043334960938 14 Oxidation (M) _VM(Oxidation (M))KLLRMALS_ ENSG00000103356|ENST00000449606|EARS2;ENST00000564987.1_1_16:23535694-23546228:-|nuORF;nc|ENSG00000103356|Q5JPH6-2|EARS2 6.723162845929126 0.6955379296933136 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MP 4 -1 17.88 0.0 0.0 1.5196 0.0 0.0 0.0 651.4323162609825 651.4323162609825 4.777974556978958 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}MP 1.5196 - 187 1 1.038 97732.8 1.0 8626 4819 13433 HBL1_DMSO_200M_050219_2,13447 HBL1_DMSO_200M_050219_2,13447,VMKLLRMALS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13448 71.218 441.0 317260.0 25 0 15551.0 -1 0 162 571.2863573968497 570.2790809302496 1 571.2855102419853 MULTI CID FTMS 0 0 0 13433 332810.34375 0.0401975396138184 5 -0.5701828002929688 15 4 [EP]{I|L} 3 -1 25.942 0.0 0.0 4.549 0.0 0.0 0.0 228.0762324840364 228.0762324840364 8.753202446913768 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [EP]{I|L} 4.549 - 111 1 1.038 108591.2 1.0 8627 4819 13433 HBL1_DMSO_200M_050219_2,13448 HBL1_DMSO_200M_050219_2,13448, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13449 71.227 520.0 319740.0 25 0 11889.0 -1 0 137 873.9143152313983 1745.8140775295965 2 873.9162475466728 MULTI CID FTMS 0 0 0 13433 293381.53125 0.2552128261217289 3 -0.2926406860351562 16 4 NMPN{I|L}NEG{[{M(Oxidation (M))|F}C]|[YS]}VK[RP]Q 15 -1 + 101.31 0.0 0.0 5.8028 5.8028 55.907 0.0 0.0 0.0 48.51289727215298 2.644455092115564 2.644455092115564 0.0 0 1.055462187404089 1.5228787452803376 0.0 2.2034021960761265 NMPN{I|L}NEG{[{M(Oxidation (M))|F}C]|[YS]}VK[RP]Q;NMPN{I|L}NAD{[{M(Oxidation (M))|F}C]|[YS]}VK[RP]Q;NMPN{I|L}NEAQ[HT]P[RP]Q;NMPN{I|L}NAEQ[HT]P[RP]Q;NMPN{I|L}NWQ{I|L}{I|L}[C(Carbamidomethyl (C))C]{I|L}Q;NMPN{I|L}NW{[{M(Oxidation (M))|F}C]|[YS]}VK[RP]Q;NMPN{I|L}NE[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]VK[RP]Q;NMPN{I|L}NAE[H{I|L}][RH][WD];NMPN{I|L}NEA[H{I|L}][RH][WD];NMPN{I|L}NEA[RH][H{I|L}][WD] 5.8028;5.8028;5.7188;5.7188;5.683;5.4196;5.2194;4.5696;4.5696;4.0783 -;-;-;-;-;-;-;-;-;- 12921 + 1 1.038 113211.8 1.0 8628 4819 13433 HBL1_DMSO_200M_050219_2,13449 HBL1_DMSO_200M_050219_2,13449, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13450 71.238 563.0 319630.0 25 0 21656.0 + 3089 AVNPKFLAV 9 174 479.7903251546459 957.566097376092 2 479.7909423708916 MULTI CID FTMS 0 0 0 13433 230022.265625 1.0 0 0.0 17 Unmodified _AVNPKFLAV_ ENSG00000172725|ENST00000341356|CORO1B;ENST00000453768.6_1_11:67208484-67210099:-|nuORF 39.957323273325 0.0756908302845263 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}NAVAV 9 7 + 35.791 0.0 0.0 3.7378 3.7378 63.152 0.0 0.0 0.0 0.7298161239320038 5.688492217971238 0.7298161239320038 0.0443219174010778 0 0.5682503180159344 1.3979400086720375 0.0 0.6109243748081782 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}NAVAV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}ANVAV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KN{I|L}AVAV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}NG{I|L}AV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KN{I|L}G{I|L}AV;{[VA]|[{I|L}G]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]AVAV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}GGAVAV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}AGGVAV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KGG{I|L}AVAV;[KP]{M(Oxidation (M))|F}{I|L}NAVAV 3.7378;3.7331;3.6073;3.4188;3.2883;2.7874;2.7761;2.7715;2.6457;2.491 -;-;-;-;-;-;-;-;-;- 1600 1 1.038 135155.6 1.0 8629 4819 13433 HBL1_DMSO_200M_050219_2,13450 HBL1_DMSO_200M_050219_2,13450,AVNPKFLAV True True AVNPKFLAV 71.238264 479.790942370892 1828344.625 13433.0 ENST00000453768.6_1_11:67208484-67210099:-|nuORF;;ENSG00000172725|ENST00000341356|CORO1B 5.743946711222331 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13451 71.25 680.0 556440.0 25 0 106920.0 -1 0 178 341.7471002345193 681.4796475358386 2 341.7468139529228 MULTI CID FTMS 0 0 0 13433 239078.015625 0.2256649693829381 -3 0.248199462890625 18 4 {I|L}{I|L}{I|L}PKV 6 -1 + 66.397 0.0 0.0 9.7431 9.7431 64.852 0.0 0.0 0.0 36.197887582883936 0.0 0.0 0.0 0 0.5189301784845295 2.0 0.0 0.2614393726401688 {I|L}{I|L}{I|L}PKV;{I|L}{I|L}{I|L}PVK;{I|L}{I|L}{I|L}VPK;{I|L}{I|L}V{I|L}PK;{I|L}{I|L}VKP{I|L};{I|L}{I|L}PK{I|L}V;{I|L}{I|L}PKV{I|L} 9.7431;9.7431;8.874;7.4737;6.3246;6.1945;5.26 -;-;-;-;-;-;- 122 + 1 1.038 296068.2 1.0 8630 4819 13433 HBL1_DMSO_200M_050219_2,13451 HBL1_DMSO_200M_050219_2,13451, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13452 71.26 566.0 129260.0 25 0 11519.0 + + 19228 RQVEELQLQV 10 114 621.3459103974901 1240.67726786178 2 621.3467285037041 MULTI CID FTMS 0 0 0 13433 220212.0625 0.3634765110807222 2 -0.263336181640625 19 Unmodified _LEHAITFALNL_ ENST00000606952.5_1_1:156203463-156206310:+|nuORF;ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-2|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1 27.628801355627647 0.4434699450731472 4 [AG]VREE{I|L}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 11 -1 + 49.428 0.0 0.0 3.984 3.984 64.235 0.0 0.0 0.0 0.2767142659785691 7.367585652254185 0.2767142659785691 0.2767142659785691 0 0.5796896906561032 1.3979400086720375 0.0 0.0 [AG]VREE{I|L}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[VG]AREE{I|L}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[AG]V[DV]AE{I|L}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[VG]A[DV]AE{I|L}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}REE{I|L}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}V[NG]E{I|L}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}[QA]AE{I|L}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VREE{I|L}[AG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[VG]AREE{I|L}[AG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}V{[WN]|[YH]}{I|L}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 3.984;3.9617;3.6328;3.6105;3.3579;3.3568;3.3568;3.2482;3.2259;3.2114 -;-;-;-;-;-;-;-;-;- 766 1 1.038 60557.1 1.0 8631 4819 13433 HBL1_DMSO_200M_050219_2,13452 HBL1_DMSO_200M_050219_2,13452,LEHAITFALNL False False RQVEELQLQV 71.260028 621.346728503704 5057519.0 13433.0 ENST00000606952.5_1_1:156203463-156206310:+|nuORF;;ENSG00000160783|ENST00000368277|PMF1;;nc|ENSG00000160783|Q6P1K2-2|PMF1;;nc|ENSG00000160783|Q6P1K2-4|PMF1 5.165523211161296 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13453 71.264 139.0 634200.0 25 0 59169.0 + 16320 IYFDHDLQSY 10 108 650.7963460859322 1299.5781392386643 2 651.2960082888603 MULTI CID FTMS 0 0 0 13433 188635.921875 0.173052957331327 -2 0.1528396606445312 20 Unmodified _IYFDHDLQSY_ ENSG00000164252|ENST00000312916|AGGF1 56.17704186161178 0.0466144807663799 4 [Y{I|L}]C{I|L}[RH]DMSY 10 5 + 73.254 0.0 0.0 5.6367 5.6367 70.755 0.0 0.0 0.0 42.80857585810999 14.81508216873415 14.81508216873415 0.2287874528033739 0 0.8807196863200843 1.6989700043360187 0.9247425010840048 1.3807196863200843 [Y{I|L}]C{I|L}[RH]DMSY;[Y{I|L}]C[RH]{I|L}DMSY;[RH]C{I|L}Y{I|L}DMSY;[RH]C{I|L}{I|L}YDMSY;[Y{I|L}]C{I|L}[QA]DPQSY;[HD]D{M(Oxidation (M))|F}{I|L}Y{I|L}QSY;[HD]{M(Oxidation (M))|F}D{I|L}Y{I|L}QSY;[HD]D{M(Oxidation (M))|F}Y{I|L}{I|L}QSY;[RH][HN]Q{I|L}DMSY;[Y{I|L}]C{I|L}[QA]Q[DP]SY 5.6367;5.6191;5.3744;5.1427;4.5208;4.2177;3.9861;3.9861;3.9556;3.7993 -;-;-;-;-;-;-;-;-;- 3640 + 1 1.038 73593.1 1.0 8632 4819 13433 HBL1_DMSO_200M_050219_2,13453 HBL1_DMSO_200M_050219_2,13453,IYFDHDLQSY True True IYFDHDLQSY 71.26402 650.795 23819090.0 13433.0 ENSG00000164252|ENST00000312916|AGGF1 7.382709980010986 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13455 71.271 252.0 680430.0 25 0 61715.0 -1 MFRNMPEIL 9 176 591.7862166943147 1181.5578804554293 2 591.7863036990166 MULTI CID FTMS 0 0 0 13454 642921.1875 0.5906282878108728 2 -0.191070556640625 1 2 Oxidation (M) _M(Oxidation (M))FRNM(Oxidation (M))PEIL_ ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C;nc|ENSG00000152457|Q96SD1-4|DCLRE1C 21.74664581756881 0.2544899275067181 4 {I|L}DRAY{I|L}{I|L} 7 -1 39.965 0.0 0.0 3.3824 0.0 0.0 319.06675917793126 0.0 319.06675917793126 0.0 25.224475978689043 0.0 0.0 0 2.1989700043360187 0.0 0.0 0.2614393726401688 {I|L}DRAY{I|L}{I|L} 3.3824 - 1081 1 1.038 127622.8 1.0 8633 4820 13454 HBL1_DMSO_200M_050219_2,13455 HBL1_DMSO_200M_050219_2,13455,MFRNMPEIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13456 71.272 61.0 772630.0 25 0 117560.0 + 19525 LFNKKGRIM 9 78 553.8302735297617 1105.645994126323 2 553.8307983279228 MULTI CID FTMS 0 0 0 13454 784386.625 0.6878815699252769 5 -0.509796142578125 2 Unmodified _LFNKKGRIM_ REV__ENSG00000165525|ENST00000298310|NEMF;REV__ENST00000556925.5_1_14:50264161-50281481:-|nuORF;REV__nc|ENSG00000165525|O60524-3|NEMF;REV__nc|ENSG00000165525|O60524-4|NEMF;REV__nc|ENSG00000165525|O60524-5|NEMF 4.75600775471527 0.7486543447549536 4 {M(Oxidation (M))|F} 1 -1 10.379 0.0 0.0 0.93869 0.0 0.0 940.6024588253453 0.0 940.6024588253453 0.0 0.7008935158251806 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.93869 + + 11 + 1 1.038 43261.3 1.0 8634 4820 13454 HBL1_DMSO_200M_050219_2,13456 HBL1_DMSO_200M_050219_2,13456,LFNKKGRIM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13457 71.273 40.0 1769600.0 25 0 262480.0 44418 YMDTQYYGE 9 87 390.4881822887071 1168.4427174663213 3 390.4880248904228 MULTI CID FTMS 0 0 0 13454 1272683.125 1.0 0 0.0 3 Unmodified _YMDTQYYGE_ ENSG00000143839|ENST00000272190|REN;nc|ENSG00000143839|P00797-2|REN 6.723162845929126 0.6799819581413107 4 YM{I|L}D 4 7 50.165 0.0 0.0 4.2933 0.0 0.0 0.0 643.2059274074143 643.2059274074143 44.68047529268127 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 YM{I|L}D 4.2933 - 69 + 1 1.038 60687.6 1.0 8635 4820 13454 HBL1_DMSO_200M_050219_2,13457 HBL1_DMSO_200M_050219_2,13457,YMDTQYYGE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13458 71.275 95.0 807830.0 25 0 35448.0 + 2174 AQAEVYKELRL 11 98 440.58206324200137 1318.724360326204 3 440.5822326540947 MULTI CID FTMS 0 0 0 13454 676613.8125 1.0 0 0.0 4 Unmodified _AQAEVYKELRL_ ENSG00000169710|ENST00000306749|FASN 22.48609341952514 0.5642223135719058 4 [QA]AEVYKE{I|L}R{I|L} 11 0 + 64.59 0.0 0.0 4.8979 4.8979 79.403 0.0 0.0 0.0 51.094765557566646 8.795485955775497 8.795485955775497 8.45098040014257 0 0.3807196863200844 0.6575773191777937 0.3807196863200844 0.25 + + [QA]AEVYKE{I|L}R{I|L};[QA]AEVYK{I|L}ER{I|L};[QA]AEVY{I|L}KER{I|L};[QA]AEVY{I|L}[SG]{I|L}R{I|L};[QA]AEVTV[YG]{I|L}R{I|L};[QA]{I|L}{[DA]|[EG]}YKE{I|L}R{I|L};[QA]AEV{I|L}YKER{I|L};[QA]AEV{I|L}Y[SG]{I|L}R{I|L};[QA]AEV{I|L}S[YG]{I|L}R{I|L};[QA]AEVYK{I|L}KQAA 4.8979;4.257;4.0288;3.9774;3.8439;3.6439;3.5722;3.5208;3.3873;3.0744 +;-;-;-;-;-;-;-;-;- + 611 + 1 1.038 69394.5 1.0 8636 4820 13454 HBL1_DMSO_200M_050219_2,13458 HBL1_DMSO_200M_050219_2,13458,AQAEVYKELRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13459 71.277 75.0 736190.0 25 0 83383.0 + 10038 FPNLDSPNV 9 98 501.7498071387214 1001.4850613442428 2 501.7483398318291 MULTI CID FTMS 0 0 0 13454 648562.75 0.5016466786381165 -2 0.1789703369140625 5 Unmodified _FPNLDSPNV_ ENSG00000149308|ENST00000278612|NPAT;ENST00000530859.1_1_11:108029671-108040846:-|nuORF 52.268347100219714 0.0353964759249114 4 {[QV]|[N{I|L}]|[RA]|[KV]}PD{M(Oxidation (M))|F}S 6 7 40.38 0.0 0.0 4.032 0.0 0.0 0.0 325.1542264990693 325.1542264990693 22.050055256054783 0.0 0.0 0.0 0 0.3252574989159953 0.7958800173440752 0.75 0.3252574989159953 {[QV]|[N{I|L}]|[RA]|[KV]}PD{M(Oxidation (M))|F}S 4.032 - 557 1 1.038 48944.2 1.0 8637 4820 13454 HBL1_DMSO_200M_050219_2,13459 HBL1_DMSO_200M_050219_2,13459,FPNLDSPNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13460 71.279 77.0 752300.0 25 0 108740.0 + 41240 VPFVGKVHI 9 85 332.5396496529488 994.5971195590464 3 332.5392944216728 MULTI CID FTMS 0 0 0 13454 656617.125 1.0 0 0.0 6 Unmodified _VPFVGKVHI_ ENSG00000131979|ENST00000491895|GCH1;nc|ENSG00000131979|P30793-2|GCH1;nc|ENSG00000131979|P30793-3|GCH1;nc|ENSG00000131979|P30793-4|GCH1 26.88365393820708 0.1891292719743517 4 VP{M(Oxidation (M))|F}VGKVH{I|L} 9 0 + 55.315 0.0 0.0 5.5616 5.5616 75.841 0.0 0.0 0.0 37.61230030668848 11.082268588648247 11.082268588648247 3.0102999566398125 0 0.2742275032520141 0.0 0.0 0.0 + + VP{M(Oxidation (M))|F}VGKVH{I|L};V{I|L}MVGKVH{I|L} 5.5616;5.2589 +;- + 191 + 1 1.038 52020.5 1.0 8638 4820 13454 HBL1_DMSO_200M_050219_2,13460 HBL1_DMSO_200M_050219_2,13460,VPFVGKVHI False True VPFVGKVHI 71.278959 332.539294421673 15405061.0 13454.0 ENSG00000131979|ENST00000491895|GCH1;;nc|ENSG00000131979|P30793-2|GCH1;;nc|ENSG00000131979|P30793-4|GCH1;;nc|ENSG00000131979|P30793-3|GCH1 5.743784427642822 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13461 71.283 207.0 679680.0 25 0 243390.0 11853 GLSGSELRV 9 113 459.256949107591 0 459.2569763064384 PEAK CID FTMS 0 0 0 13454 446518.21875 1.0 0 0.0 7 Unmodified _GLSGSELRV_ ENST00000376811.5_2_9:77698049-77703044:-|nuORF;ENST00000490321.1_1_9:77702731-77703044:-|nuORF 10.823927491677226 0.3028200641087142 4 T{I|L}E 3 7 14.693 0.0 0.0 1.6031 0.0 0.0 187.0606018518235 383.2414644830688 570.3020663348923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L}E 1.6031 - 153 + 1 1.038 115231.3 1.0 8639 4820 13454 HBL1_DMSO_200M_050219_2,13461 HBL1_DMSO_200M_050219_2,13461,GLSGSELRV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13462 71.293 556.0 577350.0 25 0 138480.0 -1 0 112 1003.7340616376708 3008.1803555132124 3 1003.733630359173 MULTI CID FTMS 0 0 0 13454 338244.40625 1.0 0 0.0 8 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N[QT]SPNV 9 -1 36.243 0.0 0.0 1.2048 0.0 0.0 0.0 2020.6818563279187 2020.6818563279187 2.6059905927697 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.6861818737241735 0.6237125054200234 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N[QT]SPNV 1.2048 - 10305 1 1.038 230142.6 1.0 8640 4820 13454 HBL1_DMSO_200M_050219_2,13462 HBL1_DMSO_200M_050219_2,13462, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13463 71.297 212.0 494480.0 25 0 51388.0 + 38853 TVIPLNERL 9 120 527.816263622973 1053.617974312746 2 527.8155395388603 MULTI CID FTMS 0 0 0 13454 230592.921875 0.4614041167349729 -1 0.1015701293945312 9 Unmodified _TVIPLNERL_ ENSG00000189057|ENST00000343597|FAM111B;nc|ENSG00000189057|Q6SJ93-2|FAM111B 38.17557092003332 0.0854718145212029 4 {[TV]|[{I|L}S]}{I|L}P{I|L}[WQ]VV 9 4 + 51.112 0.0 0.0 4.8511 4.8511 68.021 0.0 0.0 0.0 35.362211765186785 3.0964043401818344 3.0964043401818344 0.5102999566398125 0 0.8807196863200843 1.6989700043360187 0.0 0.805462187404089 {[TV]|[{I|L}S]}{I|L}P{I|L}[WQ]VV;{[TV]|[{I|L}S]}{I|L}{I|L}P[WQ]VV;{[TV]|[{I|L}S]}{I|L}{I|L}[WQ]VPV;{[TV]|[{I|L}S]}{I|L}{I|L}[WQ]PVV;{[TV]|[{I|L}S]}{I|L}{[NV]|[RG]}[DV]VPV;{[TV]|[{I|L}S]}{I|L}{[NV]|[RG]}[DV]PVV;{[TV]|[{I|L}S]}{I|L}[HM][RV][KA] 4.8511;4.8026;4.0179;3.9885;2.4538;2.4244;1.9534 -;-;-;-;-;-;- 770 + 1 1.038 84332.8 1.0 8641 4820 13454 HBL1_DMSO_200M_050219_2,13463 HBL1_DMSO_200M_050219_2,13463,TVIPLNERL True True TVIPLNERL 71.296703 527.81553953886 6310329.0 13454.0 ENSG00000189057|ENST00000343597|FAM111B;;nc|ENSG00000189057|Q6SJ93-2|FAM111B 1.5920602480570476 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13464 71.307 586.0 414890.0 25 0 29199.0 + 32025 RVIEGDVVSAL 11 199 579.3302478418418 1156.6459427504835 2 579.3311035037041 MULTI CID FTMS 0 0 0 13454 236451.640625 0.0240343621017586 5 -0.509796142578125 10 Unmodified _RVIEGDVVSAL_ ENSG00000169756|ENST00000544547|LIMS1;ENSG00000256671|ENST00000632897|LIMS4;ENSG00000256977|ENST00000480744|LIMS3;ENST00000603767.1_1_2:111195993-111209584:-|nuORF;nc|ENSG00000169756|P48059-3|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059|LIMS1 28.23362336080872 0.4292685378469897 4 [VS][TP]{[RE]|[WV]}VVSA{I|L} 11 5 + 47.809 0.0 0.0 4.1334 4.1334 67.955 0.0 0.0 0.0 1.0686585500123158 10.923838684369857 1.0686585500123158 1.8168229564640723 0 0.9802046884880936 1.0457574905606752 0.7742275032520141 0.0 [VS][TP]{[RE]|[WV]}VVSA{I|L};{NN|[MP]|[D{I|L}]|[EV]}R{I|L}[DG]VVSA{I|L};{NN|[MP]|[D{I|L}]|[EV]}R{[RE]|[WV]}VVSA{I|L};[VS][TP]{I|L}[RD]VSA{I|L};{[QG]|[NA]}[KA]{I|L}[DG]VVSA{I|L};{[QN]|[E{I|L}]|[KN]}AA{I|L}[DG]VVSA{I|L};{NN|[MP]|[D{I|L}]|[EV]}R{I|L}[RD]VSA{I|L};{[QN]|[E{I|L}]|[KN]}AA{[RE]|[WV]}VVSA{I|L};{NN|[MP]|[D{I|L}]|[EV]}R{[RE]|[WV]}VWA{I|L};{[TV]|[{I|L}S]}[PS]{[RE]|[WV]}VVSA{I|L} 4.1334;3.9763;3.8203;3.7209;3.5262;3.4116;3.4078;3.2525;3.2517;3.136 -;-;-;-;-;-;-;-;-;- 5348 1 1.038 181607.6 1.0 8642 4820 13454 HBL1_DMSO_200M_050219_2,13464 HBL1_DMSO_200M_050219_2,13464,RVIEGDVVSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13465 71.321 800.0 237900.0 25 0 33518.0 -1 0 162 377.7103903391108 0 377.7104675173759 PEAK CID FTMS 0 0 0 13454 196876.65625 1.0 0 0.0 11 4 {M(Oxidation (M))|F}{I|L}K 3 -1 20.685 0.0 0.0 2.7455 0.0 0.0 276.1097264106831 86.0255602472289 362.135286657912 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.6861818737241735 {M(Oxidation (M))|F}{I|L}K 2.7455 - 46 + 1 1.038 148706.0 0.959999978542328 8643 4820 13454 HBL1_DMSO_200M_050219_2,13465 HBL1_DMSO_200M_050219_2,13465, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13466 71.335 800.0 390170.0 25 0 28344.0 + 21924 LPPHIIRL 8 220 320.2117583217455 957.6134455654365 3 320.2116271853447 MULTI CID FTMS 0 0 0 13454 195926.09375 0.0258613963280916 50 -4.985954284667969 12 Unmodified _LPPHIIRL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 29.081581746732265 0.4323690340403521 4 {I|L}PPH{I|L}{I|L}[R{I|L}] 8 0 + 57.785 0.0 0.0 6.0343 6.0343 82.549 0.0 0.0 0.0 46.81603738369894 1.593793813122062 1.593793813122062 6.505149978319906 0 0.588154257471345 1.154901959985743 0.0 0.0 + + {I|L}PPH{I|L}{I|L}[R{I|L}];{I|L}PP{I|L}H{I|L}[R{I|L}];{I|L}P{I|L}PH{I|L}[R{I|L}];{I|L}{I|L}PPH{I|L}[R{I|L}] 6.0343;5.355;5.0406;3.3052 +;-;-;- + 150 + 1 1.038 251319.3 0.9100000262260436 8644 4820 13454 HBL1_DMSO_200M_050219_2,13466 HBL1_DMSO_200M_050219_2,13466,LPPHIIRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13467 71.348 800.0 354950.0 25 0 29448.0 + 24211 MAHVAGFTV 9 222 466.7364361148406 931.4583192964812 2 466.7350646853447 MULTI CID FTMS 0 0 0 13454 145052.125 0.5511810986221625 -2 0.1789703369140625 13 Unmodified _MAHVAGFTV_ ENSG00000115042|ENST00000233379|FAHD2A;ENSG00000144199|ENST00000414820|FAHD2B;ENST00000463096.5_1_2:97749678-97751586:-|nuORF;ENST00000470100.1_1_2:96076623-96078518:+|nuORF;ENST00000607780.5_1_2:96676383-96687353:+|nuORF 49.66892048692302 0.0410958345688192 4 [HV]CVAG{M(Oxidation (M))|F}TV 9 3 + 65.613 0.0 0.0 7.0441 7.0441 86.25 0.0 0.0 0.0 11.857186587020507 12.98332479720628 11.857186587020507 6.478174818886373 0 0.8807196863200843 1.0457574905606752 0.3494850021680094 0.0 [HV]CVAG{M(Oxidation (M))|F}TV;[HV]CVQ{M(Oxidation (M))|F}TV;[HV]AMAG{M(Oxidation (M))|F}TV;{[DS]|[MA]|[CV]|TT}HVAG{M(Oxidation (M))|F}TV;[HV]AAMG{M(Oxidation (M))|F}TV;[HV]AMQ{M(Oxidation (M))|F}TV;{[DS]|[MA]|[CV]|TT}HVQ{M(Oxidation (M))|F}TV;[HA]MVAG{M(Oxidation (M))|F}TV;{[VA]|[{I|L}G]}HMAG{M(Oxidation (M))|F}TV;[HV]{[WS]|[C(Carbamidomethyl (C)){I|L}]}G{M(Oxidation (M))|F}TV 7.0441;6.3486;6.2087;5.7711;5.5623;5.5132;5.0757;5.0141;4.8423;4.6588 -;-;-;+;-;-;-;-;-;- + 5025 1 1.038 215685.0 0.9900000095367432 8645 4820 13454 HBL1_DMSO_200M_050219_2,13467 HBL1_DMSO_200M_050219_2,13467,MAHVAGFTV True True MAHVAGFTV 71.348424 466.735064685345 2515989.5 13454.0 ENSG00000115042|ENST00000233379|FAHD2A;;ENST00000463096.5_1_2:97749678-97751586:-|nuORF;;ENST00000470100.1_1_2:96076623-96078518:+|nuORF;;ENSG00000144199|ENST00000414820|FAHD2B;;ENST00000607780.5_1_2:96676383-96687353:+|nuORF 6.926783402760823 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13468 71.363 779.0 202240.0 25 0 24381.0 + 37279 TIPNNLIGC 9 172 472.7475675065889 0 472.7481567263603 PEAK CID FTMS 0 0 0 13454 134418.59375 0.9106336727589824 4 -0.4686126708984375 14 Unmodified _TIPNNLIGC_ ENSG00000169564|ENST00000303577|PCBP1 60.38955033654506 0.0164693212794761 4 {I|L}T{I|L}N 4 7 31.23 0.0 0.0 3.3101 0.0 0.0 291.12549282392155 208.07320581607652 499.19869863999816 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.7742275032520141 0.5752574989159953 {I|L}T{I|L}N 3.3101 - 214 + 1 1.038 121256.1 1.0 8646 4820 13454 HBL1_DMSO_200M_050219_2,13468 HBL1_DMSO_200M_050219_2,13468,TIPNNLIGC True True TIPNNLIGC 71.363348 472.74815672636 1215077.875 13454.0 ENSG00000169564|ENST00000303577|PCBP1 2.8585782051086426 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13469 71.377 787.0 243720.0 25 0 20652.0 + 25045 MPTLPPPSV 9 185 469.7542392154372 937.4939254976744 2 469.7552673220634 MULTI CID FTMS 0 0 0 13454 127421.53125 0.1108027888192877 30 -3.1754074096679688 15 Unmodified _MPTLPPPSV_ ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 104.79918948944588 0.0084531067040494 4 [{I|L}P]TMPP 6 5 53.764 0.0 0.0 5.7349 0.0 0.0 0.0 298.1391030701932 298.1391030701932 26.81774501648244 0.0 0.0 0.0 0 1.086696871556164 2.0 1.3098943791441968 0.0 [{I|L}P]TMPP 5.7349 - 2699 1 1.038 145097.8 1.0 8647 4820 13454 HBL1_DMSO_200M_050219_2,13469 HBL1_DMSO_200M_050219_2,13469,MPTLPPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13470 71.392 800.0 479730.0 25 0 107510.0 -1 VMALTATA 8 163 397.2102083501861 792.4058637671723 2 397.2095519900322 MULTI CID FTMS 0 0 0 13454 123414.546875 0.4109508809876143 -1 0.1015701293945312 16 Oxidation (M) _VM(Oxidation (M))ALTATA_ ENSG00000197299|ENST00000355112|BLM 9.347437153973935 0.7675937258251505 4 VV[TP]NTY 7 -1 + 44.158 0.0 0.0 5.5726 5.5726 84.806 0.0 0.0 0.0 26.08413556707509 13.309932190414244 13.309932190414244 9.33053210369387 0 0.1462566630072955 0.0 0.6989700043360187 0.0 VV[TP]NTY;VV[TP]GGTY;SAV[RP]TY;V{[SA]|[TG]}[RP]TY;VV[YQ]ADV;VVVV{[CT]|[{M(Oxidation (M))|F}G]}{[CA]|SS};SAV[R{M(Oxidation (M))|F}]DV;V{[SA]|[TG]}[R{M(Oxidation (M))|F}]DV 5.5726;4.3952;3.2724;2.5431;1.8227;1.1137;1.1031;0.37383 -;-;-;-;-;-;-;- 164 + 1 1.038 294494.6 0.8799999952316284 8648 4820 13454 HBL1_DMSO_200M_050219_2,13470 HBL1_DMSO_200M_050219_2,13470,VMALTATA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13471 71.398 334.0 163240.0 25 0 21728.0 + 33273 SFPEHRVLSF 10 77 406.8803303792884 1217.619161738065 3 406.8804199099541 MULTI CID FTMS 0 0 0 13454 120746.03125 0.3830440911722486 5 -0.509796142578125 17 Unmodified _SFPEHRVLSF_ ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2 15.248480904072842 0.5916873121453583 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PE 4 6 39.085 0.0 0.0 3.21 0.0 0.0 0.0 754.4001131464456 754.4001131464456 21.97210508875086 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PE 3.21 + + 51 + 1 1.038 50912.1 1.0 8649 4820 13454 HBL1_DMSO_200M_050219_2,13471 HBL1_DMSO_200M_050219_2,13471,SFPEHRVLSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13472 71.412 800.0 238790.0 25 0 19892.0 + + 1278 IAYSRPVYF 9 217 558.3261865841325 0 558.2974120974541 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _AIPYLQAVQL_ ENSG00000197136|ENST00000355703|PCNX3;nc|ENSG00000197136|Q9H6A9-2|PCNX3;nc|ENSG00000100731|Q96RV3-3|PCNX1;ENSG00000100731|ENST00000304743|PCNX1;nc|ENSG00000100731|Q96RV3-4|PCNX1 10.823927491677226 0.3685635357628707 4 {M(Oxidation (M))|F}{I|L}[WE]DN{I|L} 7 -1 12.44 0.0 0.0 1.116 0.0 0.0 112.07530458669676 82.06705652408436 194.1423611107811 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}[WE]DN{I|L} 1.116 - 797 + 1 1.038 147177.4 0.8500000238418579 8650 4820 13454 HBL1_DMSO_200M_050219_2,13472 HBL1_DMSO_200M_050219_2,13472,AIPYLQAVQL False False IAYSRPVYF 71.411833 558.297412097454 1180104.375 13454.0 ENSG00000197136|ENST00000355703|PCNX3;;nc|ENSG00000197136|Q9H6A9-2|PCNX3;;nc|ENSG00000100731|Q96RV3-3|PCNX1;;ENSG00000100731|ENST00000304743|PCNX1;;nc|ENSG00000100731|Q96RV3-4|PCNX1 2.520324851075808 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13473 71.426 800.0 325910.0 25 0 24082.0 11791 GLLPTPNPL 9 215 461.27364972929513 920.5327465253904 2 461.7601806521416 MULTI CID FTMS 0 0 0 -1 0 19 Unmodified _GLLPTPNPL_ ENSG00000116754|ENST00000370949|SRSF11;nc|ENSG00000116754|Q05519-2|SRSF11 28.486842064014134 0.1687311288560894 4 [TP]A[{I|L}P]V{M(Oxidation (M))|F}P 8 7 25.383 0.0 0.0 2.7574 0.0 0.0 0.0 95.06915683754896 95.06915683754896 7.525859292843027 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.8205823742494345 0.0 [TP]A[{I|L}P]V{M(Oxidation (M))|F}P 2.7574 - 1049 1 1.038 199620.8 0.7599999904632568 8651 4820 13454 HBL1_DMSO_200M_050219_2,13473 HBL1_DMSO_200M_050219_2,13473,GLLPTPNPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13475 71.43 2.6 14346000.0 25 0 1845200.0 + 44435 YMIDPSGVSY 10 57 566.2549721209491 1130.495391308698 2 566.2559081912041 MULTI CID FTMS 0 0 0 13474 18061332.0 0.5533066086956842 1 -0.0293045043945312 1 Unmodified _YMIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 30.63653989081413 0.2803493085145199 4 [PS]KY[C(Carbamidomethyl (C))Q]VSY 9 7 [PS]KY[C(Carbamidomethyl (C))Q]V + + 29.024 1.2148 0.14086 2.5673 2.5673 45.192 0.0 0.0 0.0 0.0 18.566147098514705 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 [PS]KY[C(Carbamidomethyl (C))Q]VSY 2.5673 - 84 + 1 1.041 37058.5 1.0 8652 4821 13474 HBL1_DMSO_200M_050219_2,13475 HBL1_DMSO_200M_050219_2,13475,YMIDPSGVSY False True YMIDPSGVSY 71.430006 566.255908191204 912101664.0 13474.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 6.406230131785075 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13476 71.431 9.3 3408700.0 25 0 444760.0 + 18986 LDGGKELKIDI 11 62 600.8453419844042 1199.6761310356085 2 600.8458129763603 MULTI CID FTMS 0 0 0 13474 4066321.5 0.0151311300865304 6 -0.6456527709960938 2 Unmodified _LDGGKELKIDI_ nc|ENSG00000282100|Q58FF6|HSP90AB4P 16.565877749689598 0.6905575015977202 4 {NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L}K 7 6 35.239 0.0 0.0 2.9373 0.0 0.0 0.0 356.1833081198458 356.1833081198458 23.818520767283378 0.0 0.0 0.0 0 0.9247425010840048 1.2218487496163564 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L}K 2.9373 - 97 1 1.041 28852.1 1.0 8653 4821 13474 HBL1_DMSO_200M_050219_2,13476 HBL1_DMSO_200M_050219_2,13476,LDGGKELKIDI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13477 71.432 6.8 6819500.0 25 0 884390.0 + 36709 TDGTMLRSL 9 61 497.2540729310402 992.4935929288804 2 497.2540161013603 MULTI CID FTMS 0 0 0 13474 8239568.5 0.6976756700048188 1 -0.0293045043945312 3 Unmodified _TDGTMLRSL_ REV__ENSG00000097007|ENST00000318560|ABL1;REV__ENSG00000143322|ENST00000502732|ABL2;REV__ENST00000504324.1_1_1:179086401-179112191:-|nuORF;REV__ENST00000509520.5_1_1:179086401-179112191:-|nuORF;REV__nc|ENSG00000097007|P00519-2|ABL1;REV__nc|ENSG00000143322|P42684-10|ABL2;REV__nc|ENSG00000143322|P42684-2|ABL2;REV__nc|ENSG00000143322|P42684-3|ABL2;REV__nc|ENSG00000143322|P42684-4|ABL2;REV__nc|ENSG00000143322|P42684-5|ABL2;REV__nc|ENSG00000143322|P42684-6|ABL2;REV__nc|ENSG00000143322|P42684-7|ABL2;REV__nc|ENSG00000143322|P42684-8|ABL2 30.63653989081413 0.1413794767160703 4 {I|L}{M(Oxidation (M))|F}GES{I|L} 6 -1 57.211 0.0 0.0 5.7644 0.0 0.0 328.1502167490428 0.0 328.1502167490428 0.0 20.83613437787733 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 {I|L}{M(Oxidation (M))|F}GES{I|L} 5.7644 - 329 1 1.041 42405.1 1.0 8654 4821 13474 HBL1_DMSO_200M_050219_2,13477 HBL1_DMSO_200M_050219_2,13477,TDGTMLRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13478 71.434 6.6 5348100.0 25 0 401640.0 + 17387 KMIEDLQNEL 10 67 616.8132268869591 1231.611900840718 2 616.8137084841728 MULTI CID FTMS 0 0 0 13474 8087275.5 1.0 0 0.0 4 Unmodified _KMIEDLQNEL_ ENSG00000198887|ENST00000361138|SMC5 79.59630418116434 0.0173986606250113 4 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EM{I|L}QNE{I|L} 10 2 + 80.411 0.0 0.0 6.5289 6.5289 86.827 0.0 0.0 0.0 5.087870862831707 27.073259432077563 5.087870862831707 9.164539485499247 0 0.3182503180159344 0.0 2.079689690656103 1.579689690656103 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EM{I|L}QNE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EM{I|L}[AG]NE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}EM{I|L}QGGE{I|L};[Q{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}QNE{I|L};[AG]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}QNE{I|L};[Q{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}QGGE{I|L};[Q{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}[AG]NE{I|L};[AG]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}QGGE{I|L};[AG]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}[AG]NE{I|L};[AG]D{I|L}QN{I|L}Q{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L} 6.5289;5.7848;5.7848;5.7295;5.5647;4.9854;4.9854;4.8235;4.5144;3.8075 -;-;-;-;-;-;-;-;-;- 1498 1 1.041 31988.6 1.0 8655 4821 13474 HBL1_DMSO_200M_050219_2,13478 HBL1_DMSO_200M_050219_2,13478,KMIEDLQNEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13479 71.435 11.0 3919500.0 25 0 327250.0 + 2318 AQIKEMVEL 9 67 530.7892083260439 1059.5638637188877 2 530.7897216677666 MULTI CID FTMS 0 0 0 13474 4775280.0 0.3993691090760696 1 -0.0293045043945312 5 Unmodified _AQIKEMVEL_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 40.23920728925047 0.0741434193262949 4 MVE{I|L} 4 5 36.938 0.0 0.0 3.4862 0.0 0.0 569.31743056465 0.0 569.31743056465 0.0 11.827125221306645 0.0 0.0 0 0.5 0.0 0.0 0.0 + MVE{I|L} 3.4862 + + 185 1 1.041 39845.5 1.0 8656 4821 13474 HBL1_DMSO_200M_050219_2,13479 HBL1_DMSO_200M_050219_2,13479,AQIKEMVEL True True AQIKEMVEL 71.434721 530.789721667767 261022272.0 13474.0 ENSG00000165280|ENST00000358901|VCP;;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 6.9419929186503095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13480 71.436 15.0 3368400.0 25 0 592310.0 + 9117 FFPDKPITQY 10 54 628.3213562907354 1254.6281596482706 2 628.3220703005791 MULTI CID FTMS 0 0 0 13474 3698694.25 0.1540761937476469 6 -0.6456527709960938 6 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 34.93206674587334 0.2110832994570416 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}]QY 10 3 + 47.682 0.0 0.0 3.8005 3.8005 69.439 0.0 0.0 0.0 39.010234424404686 16.532125137753436 16.532125137753436 3.133345013315264 0 0.4247425010840047 0.0 0.3807196863200844 0.3252574989159953 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}]QY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}][AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]T[AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]T[AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PD{I|L}{I|L}{[NV]|[RG]}QY;[DP]KV{[HG]|PP}VMP[{M(Oxidation (M))|F}E];[DP]P{[NV]|[RG]}{I|L}{I|L}DP[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}DP[Y{I|L}] 3.8005;3.5508;3.4873;2.8108;2.3309;2.2674;2.2425;1.0138;0.93914;0.63006 -;-;+;-;-;-;-;-;-;- + 213 + 1 1.041 44163.1 1.0 8657 4821 13474 HBL1_DMSO_200M_050219_2,13480 HBL1_DMSO_200M_050219_2,13480,FFPDKPITQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13481 71.437 19.0 2347700.0 25 0 384300.0 + 17843 KQLDDLKVEL 10 62 400.8994449725738 1199.6765055179214 3 400.8993408083916 MULTI CID FTMS 0 0 0 13474 2280664.0 0.0155381327206805 6 -0.6456527709960938 7 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 25.997395711884035 0.38458358153512 4 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}] 10 6 + 45.468 0.0 0.0 3.79 3.79 76.095 0.0 0.0 0.0 10.13363961557981 1.249387366082999 1.249387366082999 9.164539485499247 0 0.5 1.5228787452803376 0.7614393726401688 0.0 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}];{NN|[MP]|[D{I|L}]|[EV]}K[AG]D{I|L}{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}];{[TV]|[{I|L}S]}[VG]QD{I|L}{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}];[KQ]{I|L}DD{I|L}{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}];{NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}];[Q{I|L}]KDD{I|L}{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}];[K{I|L}]QDD{I|L}{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}EQD{I|L}{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}];[K{I|L}]DQD{I|L}{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}];{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}] 3.79;3.0261;2.9453;2.8379;2.5821;2.3738;2.2697;2.1229;2.0187;2.0138 -;-;-;-;-;-;-;-;-;- 370 1 1.041 39687.6 1.0 8658 4821 13474 HBL1_DMSO_200M_050219_2,13481 HBL1_DMSO_200M_050219_2,13481,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13482 71.438 27.0 2169900.0 25 0 141420.0 + 3993 DALRPPLQNI 10 93 568.8248093279032 1135.6350657226062 2 568.8243896365166 MULTI CID FTMS 0 0 0 13474 1927581.875 0.390012320021512 -5 0.51153564453125 8 Unmodified _DALRPPLQNI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 63.22749603027936 0.0281198777558511 4 {[DA]|[EG]}{I|L}RP[{I|L}P]GAN{I|L} 11 2 + 70.226 0.0 0.0 6.1839 6.1839 76.184 0.0 0.0 0.0 9.41264465706422 44.29615751094933 9.41264465706422 1.804560644581315 0 2.079689690656103 1.6989700043360187 0.0 0.0 {[DA]|[EG]}{I|L}RP[{I|L}P]GAN{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]QN{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]GAGG{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]QGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}ARP[{I|L}P]GAN{I|L};{[DA]|[EG]}{I|L}GVK{[QG]|[NA]}[HV]{I|L};{NN|[MP]|[D{I|L}]|[EV]}ARP[{I|L}P]QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}ARP[{I|L}P]GAGG{I|L};{[DA]|[EG]}{I|L}RP[{I|L}P]G{I|L}{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}ARP[{I|L}P]QGG{I|L} 6.1839;6.025;5.38;5.218;5.0417;4.9118;4.8828;4.2378;4.1548;4.0758 -;+;-;-;-;-;-;-;-;- + 526 1 1.041 49172.9 1.0 8659 4821 13474 HBL1_DMSO_200M_050219_2,13482 HBL1_DMSO_200M_050219_2,13482,DALRPPLQNI True True DALRPPLQNI 71.438256 568.824389636517 351632800.0 13474.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 8.194552421569824 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13483 71.439 26.0 2342500.0 25 0 252810.0 + 42239 VSLLVQRTI 9 75 514.8265965958251 1027.63864025845 2 514.8270751833916 MULTI CID FTMS 0 0 0 13474 1823666.875 0.7925498332310051 -2 0.263336181640625 9 Unmodified _VSLLVQRTI_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 51.41523569358685 0.0372669606867193 4 VS{I|L}{I|L}VQR[{I|L}T] 9 0 + 82.062 0.0 0.0 7.9854 7.9854 91.83 0.0 0.0 0.0 56.86735547919007 2.3764301679958777 2.3764301679958777 9.208187539523747 0 1.3494850021680094 1.6989700043360187 0.0 0.3494850021680094 + + VS{I|L}{I|L}VQR[{I|L}T];VS{I|L}{I|L}V[AG]R[{I|L}T];VS{I|L}{I|L}{I|L}NR[{I|L}T];VS{I|L}{I|L}{I|L}GGR[{I|L}T] 7.9854;7.0894;6.9652;6.0691 +;-;-;- + 261 + 1 1.041 51673.8 1.0 8660 4821 13474 HBL1_DMSO_200M_050219_2,13483 HBL1_DMSO_200M_050219_2,13483,VSLLVQRTI True True VSLLVQRTI 71.439435 514.827075183392 19568816.0 13474.0 ENST00000397415.7_1_6:42848808-42854199:+|nuORF;;ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 4.326883316040039 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13484 71.441 29.0 1518000.0 25 0 350860.0 + 9782 FNLKRQQR 8 67 545.3171335917162 1088.6197142502324 2 545.3174926638603 MULTI CID FTMS 0 0 0 13474 1853827.5 0.6599696417756223 1 -0.0293045043945312 10 Unmodified _FNLKRQQR_ REV__ENSG00000128908|ENST00000648947|INO80 0.6903765706972694 0.8201419426409876 4 P 1 -1 6.9897 0.0 0.0 0.64207 0.0 0.0 617.3640207461293 371.1725863092407 988.53660705537 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.64207 - 2 + 1 1.041 41768.6 1.0 8661 4821 13474 HBL1_DMSO_200M_050219_2,13484 HBL1_DMSO_200M_050219_2,13484,FNLKRQQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13485 71.442 32.0 2493800.0 25 0 421470.0 + 21670 LPLLPGRTV 9 72 483.3108890273498 964.6072251214996 2 483.3110229372978 MULTI CID FTMS 0 0 0 13474 1793275.0 0.7557087718307556 -2 0.263336181640625 11 Unmodified _LPLLPGRTV_ ENSG00000129566|ENST00000262715|TEP1;nc|ENSG00000129566|Q99973-2|TEP1 53.832793166522166 0.0319663582346103 4 {I|L}P{I|L}{I|L}P{[NV]|[RG]}TV 9 0 + 77.616 0.0 0.0 8.0464 8.0464 85.962 0.0 0.0 0.0 63.98834371105593 10.805388235033035 10.805388235033035 4.206962271689747 0 1.424742501084005 1.6989700043360187 0.25 0.4247425010840047 + + {I|L}P{I|L}{I|L}P{[NV]|[RG]}TV;{I|L}P{I|L}{I|L}P[WK]V 8.0464;7.6102 +;- + 111 + 1 1.041 66337.2 1.0 8662 4821 13474 HBL1_DMSO_200M_050219_2,13485 HBL1_DMSO_200M_050219_2,13485,LPLLPGRTV True True LPLLPGRTV 71.441791 483.311022937298 49563768.0 13474.0 ENSG00000129566|ENST00000262715|TEP1;;nc|ENSG00000129566|Q99973-2|TEP1 6.045177459716797 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13486 71.443 27.0 1316200.0 25 0 146070.0 -1 YMTWMKMM 8 55 585.2287221347873 1168.4428913363745 2 585.2286254763603 MULTI CID FTMS 0 0 0 13474 1665944.875 0.6060148693178088 1 -0.0293045043945312 12 3 Oxidation (M) _YMTWM(Oxidation (M))KM(Oxidation (M))M(Oxidation (M))_ ENST00000445215.5_1_22:42995765-42998001:-|nuORF 9.347437153973935 0.7675937258251505 4 YS 2 -1 23.711 0.0 0.0 2.0293 0.0 0.0 0.0 915.3260375937954 915.3260375937954 16.721675119240516 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YS 2.0293 - 10 + 1 1.041 32344.6 1.0 8663 4821 13474 HBL1_DMSO_200M_050219_2,13486 HBL1_DMSO_200M_050219_2,13486,YMTWMKMM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13487 71.444 23.0 2009400.0 25 0 252270.0 + 13253 HIIENIVAV 9 78 504.2977285637242 1006.5809041942484 2 504.2977783083916 MULTI CID FTMS 0 0 0 13474 1246739.0 0.0263224423016685 5 -0.460174560546875 13 Unmodified _HIIENIVAV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 26.88365393820708 0.1891292719743517 4 [TP]Y{I|L}NT 6 8 26.476 0.0 0.0 2.6303 0.0 0.0 0.0 314.218940653486 314.218940653486 6.950462572043886 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.4247425010840047 0.0 [TP]Y{I|L}NT 2.6303 - 203 1 1.041 39864.5 1.0 8664 4821 13474 HBL1_DMSO_200M_050219_2,13487 HBL1_DMSO_200M_050219_2,13487,HIIENIVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13488 71.445 39.0 1053500.0 25 0 120800.0 + 35073 SQVDRLVALA 10 71 536.3114905241721 1070.608428115144 2 536.3118163943291 MULTI CID FTMS 0 0 0 13474 1029636.3125 0.2385937813011499 1 -0.0293045043945312 14 Unmodified _SQVDRLVALA_ ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2;nc|ENSG00000063241|Q96AB3-3|ISOC2 13.534932898082838 0.6204389833734957 4 {I|L}VA[{I|L}A] 5 5 26.466 0.0 0.0 2.472 0.0 0.0 585.2864857404312 0.0 585.2864857404312 0.0 11.00833760139686 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}VA[{I|L}A] 2.472 + + 41 1 1.041 39729.6 1.0 8665 4821 13474 HBL1_DMSO_200M_050219_2,13488 HBL1_DMSO_200M_050219_2,13488,SQVDRLVALA False True SQVDRLVALA 71.445329 536.311816394329 29295792.0 13474.0 ENSG00000063241|ENST00000425675|ISOC2;;nc|ENSG00000063241|Q96AB3-2|ISOC2;;nc|ENSG00000063241|Q96AB3-3|ISOC2 5.109222809473674 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13489 71.447 43.0 886790.0 25 0 118680.0 -1 YMIDPSGVSY 10 57 574.251496211178 1146.488439489156 2 574.2526122927666 MULTI CID FTMS 0 0 0 13474 1006462.0 0.8077454193678221 -2 0.263336181640625 15 Oxidation (M) _YM(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 25.399314129420983 0.3980215340001851 4 [DN]VV[C(Carbamidomethyl (C))K]YSY 9 -1 [DN]VV[C(Carbamidomethyl (C))K]Y + + 29.024 0.24568 0.02797 2.5315 2.5315 45.143 0.0 0.0 0.0 0.0 16.04802736857671 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 [DN]VV[C(Carbamidomethyl (C))K]YSY 2.5315 - 108 + 1 1.041 36795.7 1.0 8666 4821 13474 HBL1_DMSO_200M_050219_2,13489 HBL1_DMSO_200M_050219_2,13489,YMIDPSGVSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13490 71.448 59.0 1270500.0 25 0 129060.0 + 19764 LGQLVPLF 8 99 443.773538906193 885.532524879186 2 443.7731201052666 MULTI CID FTMS 0 0 0 13474 996840.875 0.058172286022242 45 -4.4400177001953125 16 Unmodified _LGQLVPLF_ REV__ENST00000589811.5_2_17:33693984-33700586:-|nuORF 24.67388899826682 0.525179942228231 4 {I|L}PYV 4 -1 50.349 0.0 0.0 5.6858 0.0 0.0 0.0 410.2412508600219 410.2412508600219 20.59508461319119 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PYV 5.6858 - 327 + 1 1.041 61117.4 1.0 8667 4821 13474 HBL1_DMSO_200M_050219_2,13490 HBL1_DMSO_200M_050219_2,13490,LGQLVPLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13491 71.45 103.0 1936300.0 25 0 917940.0 -1 0 43 1168.4556193327874 3502.3450285985623 3 1169.452319324017 MULTI CID FTMS 0 0 0 13474 967066.1875 0.5765231416542473 -3 0.3407363891601562 17 4 Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D 4 -1 8.4864 0.0 0.0 0.24231 0.0 0.0 2333.899952823931 643.2078391962873 2977.1077920202183 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D 0.24231 - 46 + 1 1.041 131532.4 1.0 8668 4821 13474 HBL1_DMSO_200M_050219_2,13491 HBL1_DMSO_200M_050219_2,13491, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13492 71.452 57.0 465970.0 25 0 35584.0 28834 QAERFRRL 8 63 538.3091964794049 1074.6038400256098 2 538.3091308474541 MULTI CID FTMS 0 0 0 13474 886914.875 0.7255320584857871 2 -0.122894287109375 18 Unmodified _QAERFRRL_ ENSG00000116198|ENST00000378230|CEP104;ENST00000494653.5_1_1:3750422-3768971:-|nuORF;nc|ENSG00000116198|O60308-2|CEP104;nc|ENSG00000116198|O60308-3|CEP104 2.577480529830294 0.808687252328423 4 {I|L} 1 7 10.713 0.0 0.0 0.99696 0.0 0.0 943.508867346702 0.0 943.508867346702 0.0 10.713337517843655 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.99696 + + 4 + 1 1.041 25208.8 1.0 8669 4821 13474 HBL1_DMSO_200M_050219_2,13492 HBL1_DMSO_200M_050219_2,13492,QAERFRRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13493 71.453 49.0 849880.0 25 0 78447.0 + -1 PETSMLQTV 9 74 511.2455498994595 1020.476546865719 2 511.2458984255791 MULTI CID FTMS 0 0 0 13474 865344.625 0.937376311711109 -1 0.1617660522460937 19 Oxidation (M) _PETSM(Oxidation (M))LQTV_ REV__ENSG00000149503|ENST00000394818|INCENP;REV__ENST00000528037.1_1_11:61891511-61905356:+|nuORF;REV__nc|ENSG00000149503|Q9NQS7-2|INCENP 16.942295170755138 0.3780752226737986 4 [EP]TN{[ET]|[MV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]} 9 -1 + 17.157 0.0 0.0 1.6813 1.6813 60.755 0.0 0.0 0.0 0.5676571578941036 4.057963224192992 0.5676571578941036 0.5676571578941036 0 0.0 0.0 0.8494850021680094 0.0 [EP]TN{[ET]|[MV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};{[QS]|[NT]}[EP]{[ET]|[MV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};{[CP]|[EA]}QQ{[QS]|[NT]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[EP]TGG{[ET]|[MV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]} 1.6813;1.6256;0.84573;0.77892 -;-;-;- 115 1 1.041 38553.9 1.0 8670 4821 13474 HBL1_DMSO_200M_050219_2,13493 HBL1_DMSO_200M_050219_2,13493,PETSMLQTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13494 71.455 87.0 806400.0 25 0 170880.0 + 27941 PLTRVRGG 8 72 428.26170747282816 854.5088620124563 2 428.2615844607353 MULTI CID FTMS 0 0 0 13474 803744.5625 0.1146937677089802 4 -0.3480300903320312 20 Unmodified _PLTRVRGG_ REV__ENST00000252675.6_1_19:5866654-5867368:-|nuORF 0.7936320650641473 0.8195151834710337 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.041 61330.1 1.0 8671 4821 13474 HBL1_DMSO_200M_050219_2,13494 HBL1_DMSO_200M_050219_2,13494,PLTRVRGG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13496 71.459 14.0 4584300.0 25 0 1048400.0 + + 4943 DGIVIVKV 8 74 421.77107342454485 841.5275939158897 2 421.7709533572197 MULTI CID FTMS 0 0 0 13495 4064042.0 0.9518033899916708 1 -0.0935897827148437 1 Unmodified _DGLVLVKV_ ENSG00000106261|ENST00000324306|ZKSCAN1;ENST00000482979.5_1_7:99621129-99621950:+|nuORF 34.10243960390752 0.3329570729325616 4 [DG]{I|L}V{I|L}VKV 8 -1 [DG]{I|L} + + 40.89 15.017 5.2666 4.859 4.859 51.916 0.0 0.0 0.0 0.0 25.873030232838644 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.2887254899964357 [DG]{I|L}V{I|L}VKV 4.859 + + 96 + 1 1.041 56746.9 1.0 8672 4822 13495 HBL1_DMSO_200M_050219_2,13496 HBL1_DMSO_200M_050219_2,13496,DGLVLVKV False False DGIVIVKV 71.45931 421.77095335722 102955320.0 13495.0 ENSG00000106261|ENST00000324306|ZKSCAN1;;ENST00000482979.5_1_7:99621129-99621950:+|nuORF 4.674285173416138 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13497 71.46 24.0 2669300.0 25 0 336000.0 + 38313 TQILSVPKV 9 77 492.8082487505911 983.6019445679822 2 492.8084289431572 MULTI CID FTMS 0 0 0 13495 1945771.875 0.8616517577752874 -1 0.0293045043945312 2 Unmodified _TQILSVPKV_ nc|ENSG00000120802|P42166|TMPO 41.95555342248728 0.0647214845423414 4 [QT]{I|L}{I|L}SVPKV 9 0 + 62.093 0.0 0.0 6.3128 6.3128 84.046 0.0 0.0 0.0 43.575863694820704 9.085842975353629 9.085842975353629 6.982069881698649 0 0.9247425010840048 0.8538719643217619 0.3494850021680094 0.0 + + [QT]{I|L}{I|L}SVPKV;[{I|L}V]TKS{I|L}{I|L}[NP];[QT]{I|L}{I|L}SVV[KP];[QT]{I|L}{I|L}SK[VP]V;{I|L}{I|L}SKS{I|L}{I|L}[NP];{[TV]|[{I|L}S]}{I|L}KS{I|L}{I|L}[NP];[QT]V[{I|L}T]VPKV;[{I|L}V]TK[{I|L}T]V[NP];[QT]V[{I|L}T]VV[KP];[QT]V[{I|L}T]K[VP]V 6.3128;5.603;5.3631;4.614;4.0659;3.9222;3.2148;2.505;2.265;1.516 +;-;-;-;-;-;-;-;-;- + 221 + 1 1.041 52944.0 1.0 8673 4822 13495 HBL1_DMSO_200M_050219_2,13497 HBL1_DMSO_200M_050219_2,13497,TQILSVPKV True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13498 71.462 25.0 1516000.0 25 0 98071.0 + 25076 MPVIPMNTI 9 83 516.2672060212747 1030.5198591093492 2 516.2673828005791 MULTI CID FTMS 0 0 0 13495 1365126.625 0.7860860841334965 -2 0.191070556640625 3 Oxidation (M) _MPVIPM(Oxidation (M))NTI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 56.541270873467816 0.0279970378729908 4 [VP]M{I|L}P{M(Oxidation (M))|F} 6 5 34.698 0.0 0.0 3.367 0.0 0.0 0.0 343.16180181858675 343.16180181858675 8.231909543645202 0.0 0.0 0.0 0 0.3807196863200844 1.0969100130080565 0.0 0.0 [VP]M{I|L}P{M(Oxidation (M))|F} 3.367 - 139 1 1.041 34556.0 1.0 8674 4822 13495 HBL1_DMSO_200M_050219_2,13498 HBL1_DMSO_200M_050219_2,13498,MPVIPMNTI True False MPVIPMNTI 71.461668 516.2672 29328910.0 13495.0 nc|ENSG00000147162|O15294-3|OGT;;ENSG00000147162|ENST00000373719|OGT;;nc|ENSG00000147162|O15294-4|OGT;;nc|ENSG00000147162|O15294-2|OGT 8.770185788472494 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13499 71.463 36.0 1061800.0 25 0 88428.0 + 2322 AQIKPFYTV 9 66 533.8004134669928 1065.5862740007856 2 533.8003417849541 MULTI CID FTMS 0 0 0 13495 1332661.75 0.8469831080745588 1 -0.0935897827148437 4 Unmodified _AQIKPFYTV_ ENSG00000155096|ENST00000337198|AZIN1;ENST00000522311.1_1_8:103848756-103855898:-|nuORF 47.74868867922204 0.0453060283459952 4 [QA]{I|L} 3 6 29.583 0.0 0.0 2.7762 0.0 0.0 0.0 750.3831239365855 750.3831239365855 4.889833973386928 0.0 0.0 0.0 0 0.9247425010840048 0.638272163982407 0.0 0.3494850021680094 + [QA]{I|L} 2.7762 + + 85 1 1.041 34170.2 1.0 8675 4822 13495 HBL1_DMSO_200M_050219_2,13499 HBL1_DMSO_200M_050219_2,13499,AQIKPFYTV True True AQIKPFYTV 71.462846 533.800341784954 29937580.75 13495.0 ENST00000522311.1_1_8:103848756-103855898:-|nuORF;;ENSG00000155096|ENST00000337198|AZIN1 8.831429958343506 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13500 71.464 23.0 2207400.0 25 0 308030.0 + 38058 TPFTAATVTV 10 72 504.2744782095507 1006.5344034859014 2 504.2746154665947 MULTI CID FTMS 0 0 0 13495 1239080.875 0.832048618954076 -1 0.0293045043945312 5 Unmodified _TPFTAATVTV_ REV__ENST00000558381.1_1_14:24648738-24648993:+|nuORF 25.399314129420983 0.3980215340001851 4 [H{I|L}]{[QN]|[E{I|L}]|[KN]}N{I|L}V 7 -1 30.25 0.0 0.0 3.0054 0.0 0.0 0.0 185.0468295935764 185.0468295935764 -3.2099306354564305 0.0 -3.2099306354564305 0.0 0 0.0 1.154901959985743 0.9247425010840048 0.0 [H{I|L}]{[QN]|[E{I|L}]|[KN]}N{I|L}V 3.0054 - 119 1 1.041 49660.8 1.0 8676 4822 13495 HBL1_DMSO_200M_050219_2,13500 HBL1_DMSO_200M_050219_2,13500,TPFTAATVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13501 71.465 45.0 1529200.0 25 0 193770.0 44461 YMVYMFHY 8 66 577.2456956909966 1152.4768384487932 2 577.2461425662041 MULTI CID FTMS 0 0 0 13495 939540.5625 0.2995690910973552 2 -0.2775421142578125 6 Unmodified _YMVYMFHY_ ENST00000509325.1_1_12:7719006-7719195:+|nuORF 17.086550045450526 0.6584923310065985 4 YM{I|L}DY[QA]SY 9 5 + 72.814 0.0 0.0 6.3181 6.3181 89.491 0.0 0.0 0.0 58.12137499549429 13.61818737241734 13.61818737241734 13.979400086720377 0 0.4247425010840047 2.0 0.3494850021680094 0.0 YM{I|L}DY[QA]SY;YM{I|L}D[NS][{M(Oxidation (M))|F}T]Y;YM{I|L}[C(Carbamidomethyl (C))R][{M(Oxidation (M))|F}T]Y;Y{M(Oxidation (M))|F}PDY[QA]SY;YMKQ[HN]E{[CT]|[{M(Oxidation (M))|F}G]};YE{[ET]|[MV]}Y[QA]SY;Y{M(Oxidation (M))|F}PD[NS][{M(Oxidation (M))|F}T]Y;YE[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[QA]SY;Y{M(Oxidation (M))|F}P[C(Carbamidomethyl (C))R][{M(Oxidation (M))|F}T]Y;Y{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[QA]SY 6.3181;5.1051;4.2397;3.6917;2.7549;2.7376;2.4787;2.0203;1.6134;1.6087 -;-;-;-;-;-;-;-;-;- 186 + 1 1.041 55760.0 1.0 8677 4822 13495 HBL1_DMSO_200M_050219_2,13501 HBL1_DMSO_200M_050219_2,13501,YMVYMFHY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13502 71.467 58.0 1030500.0 25 0 171700.0 + 3052 AVLGGKLYV 9 70 460.28428047050767 918.5540080078154 2 460.2843505740166 MULTI CID FTMS 0 0 0 13495 845226.0625 1.0 0 0.0 7 Unmodified _AVLGGKLYV_ ENSG00000162413|ENST00000377658|KLHL21 30.22481116460888 0.1466181017706357 4 {[VA]|[{I|L}G]}{I|L}GQ{I|L} 6 4 51.401 0.0 0.0 5.5959 0.0 0.0 0.0 334.18915735416255 334.18915735416255 19.54119982655925 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}GQ{I|L} 5.5959 - 202 + 1 1.041 53574.3 1.0 8678 4822 13495 HBL1_DMSO_200M_050219_2,13502 HBL1_DMSO_200M_050219_2,13502,AVLGGKLYV False True AVLGGKLYV 71.466725 460.284350574017 6431021.0 13495.0 ENSG00000162413|ENST00000377658|KLHL21 2.3955796559651694 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13503 71.468 41.0 1223700.0 25 0 132150.0 27133 PFNLRHLF 8 75 522.2951522026177 1042.575751472035 2 522.2953979372978 MULTI CID FTMS 0 0 0 13495 733232.0625 0.5214269866134169 5 -0.6163482666015625 8 Unmodified _PFNLRHLF_ ENST00000589222.5_2_17:58885406-58952036:+|nuORF 5.760428011301431 0.7893668129297577 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DY 4 6 15.239 0.0 0.0 1.4617 0.0 0.0 0.0 517.3406189859603 517.3406189859603 4.643024306376894 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DY 1.4617 - 28 1 1.041 43329.9 1.0 8679 4822 13495 HBL1_DMSO_200M_050219_2,13503 HBL1_DMSO_200M_050219_2,13503,PFNLRHLF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13504 71.47 76.0 694690.0 25 0 69138.0 + 35135 SQYQRFTYL 9 77 603.3013945825019 1204.5882362318036 2 603.3013183474541 MULTI CID FTMS 0 0 0 13495 555557.375 0.5817829124024119 -1 0.0293045043945312 9 Unmodified _SQYQRFTYL_ ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-17|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1 43.9818466556824 0.0535980856389242 4 EY{I|L} 3 7 32.619 0.0 0.0 2.7079 0.0 0.0 781.3832264630875 0.0 781.3832264630875 0.0 7.174165578762484 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 EY{I|L} 2.7079 - 41 1 1.041 44108.1 1.0 8680 4822 13495 HBL1_DMSO_200M_050219_2,13504 HBL1_DMSO_200M_050219_2,13504,SQYQRFTYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13505 71.479 558.0 370630.0 25 0 87572.0 -1 0 69 1163.457987468611 3487.352133006033 3 1163.797045886517 MULTI CID FTMS 0 0 0 13495 489947.6875 0.0040007437237633 -4 0.3700408935546875 10 4 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.27138 0.0 0.0 1798.606601855446 1481.6426674716663 3280.2492693271124 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.27138 - 35 + 1 1.041 170283.4 1.0 8681 4822 13495 HBL1_DMSO_200M_050219_2,13505 HBL1_DMSO_200M_050219_2,13505, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13506 71.484 239.0 414270.0 25 0 35278.0 + 5512 DLVRLCREVEL 11 140 448.9134421893118 1343.7184971681354 3 448.9134704470634 MULTI CID FTMS 0 0 0 13495 477608.5625 0.9860348428602884 1 -0.0935897827148437 11 Unmodified _DLVRLCREVEL_ REV__ENSG00000164347|ENST00000296805|GFM2;REV__nc|ENSG00000164347|Q969S9-2|GFM2;REV__nc|ENSG00000164347|Q969S9-3|GFM2;REV__nc|ENSG00000164347|Q969S9-4|GFM2;REV__nc|ENSG00000164347|Q969S9-5|GFM2 12.855947597645695 0.7677281506790111 4 {M(Oxidation (M))|F}VQK{I|L}DW{M(Oxidation (M))|F}{I|L} 9 -1 36.788 0.0 0.0 2.7378 0.0 0.0 149.10519155423873 0.0 149.10519155423873 0.0 17.998169264513713 0.0 0.0 0 0.6677353201839438 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}VQK{I|L}DW{M(Oxidation (M))|F}{I|L} 2.7378 - 1931 + 1 1.041 89610.5 1.0 8682 4822 13495 HBL1_DMSO_200M_050219_2,13506 HBL1_DMSO_200M_050219_2,13506,DLVRLCREVEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13507 71.492 469.0 358250.0 25 0 27142.0 + -1 FSDECYNSY 9 192 592.711288366528 1183.408023799856 2 592.7115966677666 MULTI CID FTMS 0 0 0 13495 446343.3125 0.7384753424066843 2 -0.2775421142578125 12 Carbamidomethyl (C) _FSDEC(Carbamidomethyl (C))YNSY_ REV__ENSG00000131126|ENST00000598265|TEX101;REV__nc|ENSG00000131126|Q9BY14-2|TEX101 7.289230182591677 0.6602208344931196 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))Y{I|L}MV 8 -1 30.355 0.0 0.0 2.565 0.0 0.0 0.0 59.944515894198645 59.944515894198645 11.854640871443747 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))Y{I|L}MV 2.565 - 614 1 1.041 122639.3 1.0 8683 4822 13495 HBL1_DMSO_200M_050219_2,13507 HBL1_DMSO_200M_050219_2,13507,FSDECYNSY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13508 71.494 58.0 757300.0 25 0 70622.0 + 14613 QVPGFTPRL 9 72 507.290436268224 1012.566319603248 2 507.7910949587822 MULTI CID FTMS 0 0 0 13495 415818.625 0.141847022723247 5 -0.6163482666015625 13 Unmodified _IIGSLGGIFH_ ENSG00000100714|ENST00000652337|MTHFD1;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 10.073929032068715 0.6785112666868882 4 {[QV]|[N{I|L}]|[RA]|[KV]}T[R{I|L}]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]} 8 5 + 21.092 0.0 0.0 2.0831 2.0831 75.36 0.0 0.0 0.0 7.319845938712035 10.25498204434899 7.319845938712035 11.480625354554371 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}T[R{I|L}]{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{I|L}{I|L}[SG]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]} 2.0831;0.94925 -;- 165 1 1.041 43146.6 1.0 8684 4822 13495 HBL1_DMSO_200M_050219_2,13508 HBL1_DMSO_200M_050219_2,13508,IIGSLGGIFH False False QVPGFTPRL 71.493733 507.791094958782 23804854.0 13495.0 ENSG00000100714|ENST00000652337|MTHFD1;;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 4.292344570159912 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13509 71.504 559.0 241510.0 25 0 26605.0 -1 VMKLLRMALS 10 168 589.3429844827069 1176.6714160322138 2 589.3433105349541 MULTI CID FTMS 0 0 0 13495 326003.9375 0.3088067958461251 -10 0.88818359375 14 Oxidation (M) _VM(Oxidation (M))KLLRMALS_ ENSG00000103356|ENST00000449606|EARS2;ENST00000564987.1_1_16:23535694-23546228:-|nuORF;nc|ENSG00000103356|Q5JPH6-2|EARS2 10.073929032068715 0.6785112666868882 4 [TP]Y{I|L}N 5 -1 21.284 0.0 0.0 1.8089 0.0 0.0 0.0 585.34576840942 585.34576840942 7.054104196828687 0.0 0.0 0.0 0 0.0 0.5086383061657274 0.0 0.0 [TP]Y{I|L}N 1.8089 - 357 1 1.041 104184.1 1.0 8685 4822 13495 HBL1_DMSO_200M_050219_2,13509 HBL1_DMSO_200M_050219_2,13509,VMKLLRMALS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13510 71.506 120.0 357590.0 25 0 46919.0 + + -1 YPLQTVQSI 9 80 524.7909100002169 1047.5672670672336 2 524.7879516482353 MULTI CID FTMS 0 0 0 13495 239383.890625 0.1282330262439397 8 -0.94818115234375 15 Oxidation (M) _M(Oxidation (M))DIVKVQSL_ ENSG00000100372|ENST00000435456|SLC25A17;ENST00000447566.5_1_22:41166840-41215302:-|nuORF 20.453626601364224 0.2830276176381075 4 VT[WP]S{I|L} 6 -1 32.44 0.0 0.0 3.0967 0.0 0.0 346.19130378773986 0.0 346.19130378773986 0.0 20.757659435244733 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 VT[WP]S{I|L} 3.0967 - 230 + 1 1.041 42106.8 1.0 8686 4822 13495 HBL1_DMSO_200M_050219_2,13510 HBL1_DMSO_200M_050219_2,13510,MDIVKVQSL False False YPLQTVQSI 71.506049 524.787951648235 6027191.0 13495.0 ENSG00000100372|ENST00000435456|SLC25A17;;ENST00000447566.5_1_22:41166840-41215302:-|nuORF 1.7628469467163086 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13511 71.51 203.0 245600.0 25 0 31574.0 + -1 MFRCTFDY 8 91 385.825329714829 1154.454159744687 3 385.8251525759697 MULTI CID FTMS 0 0 0 13495 208364.78125 0.3477371620648339 2 -0.2775421142578125 16 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FRC(Carbamidomethyl (C))TFDY_ REV__ENST00000491694.1_1_3:111658417-111664240:+|nuORF 7.910154910731844 0.7763180056447161 4 SY 2 -1 15.802 0.0 0.0 1.3688 0.0 0.0 886.3475751273028 0.0 886.3475751273028 0.0 3.037771509356908 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 SY 1.3688 - 86 + 1 1.041 49392.8 1.0 8687 4822 13495 HBL1_DMSO_200M_050219_2,13511 HBL1_DMSO_200M_050219_2,13511,MFRCTFDY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13512 71.523 709.0 246100.0 25 0 12710.0 -1 0 141 736.3302382644151 2205.9688853934454 3 736.6667358279228 MULTI CID FTMS 0 0 0 13495 199659.796875 1.0 0 0.0 17 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}QE[MD]{[CP]|[EA]}SYY{I|L} 13 -1 55.15 0.0 0.0 2.5 0.0 0.0 0.0 626.2837676500509 626.2837676500509 34.68186297671555 0.0 0.0 0.0 0 0.0 2.0 0.7059771852360797 0.2396518287104437 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}QE[MD]{[CP]|[EA]}SYY{I|L} 2.5 - 9424 1 1.041 133983.2 1.0 8688 4822 13495 HBL1_DMSO_200M_050219_2,13512 HBL1_DMSO_200M_050219_2,13512, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13513 71.531 408.0 200280.0 25 0 32312.0 + 27975 PLVTTTKL 8 97 436.77498351251535 871.5354140918307 2 436.7750732302666 MULTI CID FTMS 0 0 0 13495 203333.171875 0.0742484450035397 7 -0.7834014892578125 18 Unmodified _PLVTTTKL_ REV__ENST00000375856.4_1_13:110407955-110408252:-|nuORF 2.889219685676258 0.8067950007271085 4 {I|L} 1 -1 10.278 0.0 0.0 1.1793 0.0 0.0 740.4404871892901 0.0 740.4404871892901 0.0 0.0965257759769322 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1793 + + 10 + 1 1.041 70086.0 1.0 8689 4822 13495 HBL1_DMSO_200M_050219_2,13513 HBL1_DMSO_200M_050219_2,13513,PLVTTTKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13514 71.535 240.0 466320.0 25 0 47223.0 + 32110 RVLTSGIFET 10 93 561.811446560298 1121.608340187396 2 561.8120605349541 MULTI CID FTMS 0 0 0 13495 196476.421875 0.4711753067915691 -2 0.191070556640625 19 Unmodified _RVLTSGIFET_ ENSG00000087460|ENST00000371085|GNAS;ENSG00000141404|ENST00000334049|GNAL;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS;nc|ENSG00000141404|P38405|GNAL 37.07464296494664 0.1884581770199685 4 {I|L}{M(Oxidation (M))|F}ET 4 6 42.493 0.0 0.0 3.7886 0.0 0.0 613.3552318769836 0.0 613.3552318769836 0.0 13.564921830680705 0.0 0.0 0 1.055462187404089 0.0 0.0 0.0 + {I|L}{M(Oxidation (M))|F}ET 3.7886 + + 175 1 1.041 85808.1 1.0 8690 4822 13495 HBL1_DMSO_200M_050219_2,13514 HBL1_DMSO_200M_050219_2,13514,RVLTSGIFET False True RVLTSGIFET 71.535176 561.812060534954 4220896.0 13495.0 ENST00000371075.7_3_20:57415898-57485881:+|nuORF;;nc|ENSG00000087460|Q5JWF2-2|GNAS;;nc|ENSG00000087460|Q5JWF2|GNAS;;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;;ENSG00000141404|ENST00000334049|GNAL;;nc|ENSG00000087460|P63092-3|GNAS;;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;;nc|ENSG00000141404|P38405|GNAL;;nc|ENSG00000087460|P63092-2|GNAS;;nc|ENSG00000087460|P63092-4|GNAS;;ENSG00000087460|ENST00000371085|GNAS 4.612218856811523 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13515 71.548 760.0 132540.0 25 0 12809.0 + 17794 KQIWEKDREL 10 155 672.8667232009165 1343.7188934686328 2 673.3683349490166 MULTI CID FTMS 0 0 0 13495 167463.953125 1.0 0 0.0 20 Unmodified _KQIWEKDREL_ REV__ENSG00000165837|ENST00000298738|ERICH6B;REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B 11.517880264261096 0.6542831674726655 4 {M(Oxidation (M))|F}VKQ[W{M(Oxidation (M))|F}]VE{I|L} 9 -1 44.263 0.0 0.0 3.294 0.0 0.0 149.10287399254827 0.0 149.10287399254827 0.0 28.30620463192012 0.0 0.0 0 0.0 0.0 1.424742501084005 0.3807196863200844 {M(Oxidation (M))|F}VKQ[W{M(Oxidation (M))|F}]VE{I|L} 3.294 - 4821 + 1 1.041 79539.4 1.0 8691 4822 13495 HBL1_DMSO_200M_050219_2,13515 HBL1_DMSO_200M_050219_2,13515,KQIWEKDREL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13517 71.553 44.0 1043200.0 25 0 133400.0 + 10039 FPNLDSPNV 9 69 501.7498071387214 1001.4850613442428 2 501.7484924197197 MULTI CID FTMS 0 0 0 13516 1017172.875 0.786757170905258 1 -0.1839523315429687 1 Unmodified _FPNLDSPNV_ ENSG00000149308|ENST00000278612|NPAT;ENST00000530859.1_1_11:108029671-108040846:-|nuORF 36.12702656103203 0.0967173616627612 4 [NP]{I|L}D{M(Oxidation (M))|F}S 6 5 33.461 0.0 0.0 3.3411 0.0 0.0 0.0 325.1540930576029 325.1540930576029 14.643783536941726 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 [NP]{I|L}D{M(Oxidation (M))|F}S 3.3411 - 299 1 1.041 41219.9 1.0 8692 4823 13516 HBL1_DMSO_200M_050219_2,13517 HBL1_DMSO_200M_050219_2,13517,FPNLDSPNV True True FPNLDSPNV 71.552897 501.74849241972 26128390.0 13516.0 ENST00000530859.1_1_11:108029671-108040846:-|nuORF;;ENSG00000149308|ENST00000278612|NPAT 4.044655879338582 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13518 71.554 65.0 637000.0 25 0 53380.0 + 16321 IYFDHDLQSY 10 60 650.7963460859322 1299.5781392386643 2 650.7962524294853 MULTI CID FTMS 0 0 0 13516 577537.0625 0.4257108915656789 2 -0.2251358032226562 2 Unmodified _IYFDHDLQSY_ ENSG00000164252|ENST00000312916|AGGF1 32.78568957990786 0.2337485590374503 4 [Y{I|L}]C[RH]{I|L}[MD]SY 10 5 + 47.625 0.0 0.0 3.6646 3.6646 75.476 0.0 0.0 0.0 9.08748409920328 9.08748409920328 9.08748409920328 9.08748409920328 0 0.6989700043360187 1.6989700043360187 0.2742275032520141 0.4247425010840047 [Y{I|L}]C[RH]{I|L}[MD]SY;[HD]D{M(Oxidation (M))|F}Y{I|L}{I|L}QSY;[HD]D{M(Oxidation (M))|F}Y{I|L}Q{I|L}SY;[HD]D{M(Oxidation (M))|F}{I|L}Y{I|L}QSY;[HD]D{M(Oxidation (M))|F}{I|L}YQ{I|L}SY;[HD]D{M(Oxidation (M))|F}{I|L}QY{I|L}SY;[HD]D{I|L}{M(Oxidation (M))|F}Y{I|L}QSY;[HD]D{M(Oxidation (M))|F}Y{I|L}{I|L}[AG]SY;[HD]D{I|L}{M(Oxidation (M))|F}YQ{I|L}SY;[HD]D{I|L}{M(Oxidation (M))|F}QY{I|L}SY 3.6646;2.9654;2.8299;2.7337;2.5982;2.524;2.3666;2.2602;2.2311;2.1569 -;-;-;-;-;-;-;-;-;- 584 + 1 1.041 41636.6 1.0 8693 4823 13516 HBL1_DMSO_200M_050219_2,13518 HBL1_DMSO_200M_050219_2,13518,IYFDHDLQSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13519 71.557 103.0 1060900.0 25 0 243660.0 -1 0 77 341.7471002345193 681.4796475358386 2 341.7466918826103 MULTI CID FTMS 0 0 0 13516 851817.6875 0.804027973325005 1 -0.1839523315429687 3 4 {I|L}{I|L}{I|L}PKV 6 -1 + 62.158 0.0 0.0 9.1211 9.1211 91.998 0.0 0.0 0.0 36.197887582883936 8.697887582883936 8.697887582883936 8.697887582883936 0 0.3494850021680094 2.0 0.0 0.25 {I|L}{I|L}{I|L}PKV;{I|L}{I|L}{I|L}V[KP];{I|L}{I|L}VKP{I|L};{I|L}{I|L}V{I|L}[KP] 9.1211;7.8447;7.4341;6.8191 -;-;-;- 86 + 1 1.041 91069.6 1.0 8694 4823 13516 HBL1_DMSO_200M_050219_2,13519 HBL1_DMSO_200M_050219_2,13519, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13520 71.559 133.0 496210.0 25 0 75298.0 -1 0 88 625.3192910805553 624.3120146139553 1 625.3184692263603 MULTI CID FTMS 0 0 0 13516 500254.15625 0.0470455637318911 -4 0.38623046875 4 4 VA{I|L}E 4 -1 47.454 0.0 0.0 7.6009 0.0 0.0 0.0 209.0571230524047 209.0571230524047 30.68881289407813 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.6307196863200843 0.0 VA{I|L}E 7.6009 - 176 + 1 1.041 55037.5 1.0 8695 4823 13516 HBL1_DMSO_200M_050219_2,13520 HBL1_DMSO_200M_050219_2,13520, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13521 71.561 24.0 2182900.0 25 0 279580.0 + 42233 VSLIHAYPK 9 63 514.2989891410808 1026.5834253489616 2 514.2986328005791 MULTI CID FTMS 0 0 0 13516 352509.28125 1.0 0 0.0 5 Unmodified _VSLIHAYPK_ REV__ENSG00000158161|ENST00000373871|EYA3;REV__ENST00000471498.5_1_1:28324859-28384546:-|nuORF;REV__nc|ENSG00000158161|Q99504-3|EYA3;REV__nc|ENSG00000158161|Q99504-4|EYA3;REV__nc|ENSG00000158161|Q99504-5|EYA3 11.640296217721598 0.521594087909532 4 [VS]{I|L}{I|L} 4 -1 35.406 0.0 0.0 3.4489 0.0 0.0 0.0 611.2923236246053 611.2923236246053 2.04119982655925 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.6989700043360187 0.0 [VS]{I|L}{I|L} 3.4489 + + 185 1 1.041 46707.5 1.0 8696 4823 13516 HBL1_DMSO_200M_050219_2,13521 HBL1_DMSO_200M_050219_2,13521,VSLIHAYPK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13522 71.573 712.0 524180.0 25 0 210170.0 -1 SCAGWWRSSG 10 79 1153.48162594936 1152.47434948276 1 1154.483203113079 MULTI CID FTMS 0 0 0 13516 347985.9375 0.2666744609514475 3 -0.3372802734375 6 Carbamidomethyl (C) _SC(Carbamidomethyl (C))AGWWRSSG_ ENST00000561517.5_1_16:58283928-58292279:+|nuORF 6.2057823575117 0.6979311171683138 4 SR 2 -1 12.078 0.0 0.0 1.048 0.0 0.0 179.09222165248508 727.2379854791624 906.3302071316476 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 SR 1.048 - 102 + 1 1.041 241224.1 1.0 8697 4823 13516 HBL1_DMSO_200M_050219_2,13522 HBL1_DMSO_200M_050219_2,13522,SCAGWWRSSG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13523 71.576 122.0 523390.0 25 0 57566.0 + 28927 QARLQVVHR 9 95 553.8302735297617 1105.645994126323 2 553.8322021365166 MULTI CID FTMS 0 0 0 13516 332224.0625 0.2913497022969423 8 -0.9241867065429688 7 Unmodified _QARLQVVHR_ REV__ENSG00000160712|ENST00000368485|IL6R;REV__nc|ENSG00000160712|P08887-2|IL6R 4.3292370932331545 0.7635526921153418 4 {M(Oxidation (M))|F} 1 -1 11.259 0.0 0.0 1.0183 0.0 0.0 940.6031454708532 0.0 940.6031454708532 0.0 1.9622284906430905 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0183 - 37 + 1 1.041 54715.6 1.0 8698 4823 13516 HBL1_DMSO_200M_050219_2,13523 HBL1_DMSO_200M_050219_2,13523,QARLQVVHR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13524 71.589 774.0 145050.0 25 0 32365.0 -1 0 56 1144.8079058928845 3431.4018882788537 3 1145.142871081829 MULTI CID FTMS 0 0 0 13516 279833.5625 0.0096364963594391 9 -1.0283889770507812 8 4 E 1 -1 6.9897 0.0 0.0 0.2037 0.0 0.0 2775.174049145792 524.1613253229124 3299.335374468704 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.2037 - 22 + 1 1.041 93777.7 1.0 8699 4823 13516 HBL1_DMSO_200M_050219_2,13524 HBL1_DMSO_200M_050219_2,13524, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13525 71.593 199.0 311640.0 25 0 41903.0 -1 IQSLMLKSL 9 109 524.8076022933633 1047.6006516535265 2 524.8089477419853 MULTI CID FTMS 0 0 0 13516 262529.625 0.3729308005547874 -3 0.2846603393554687 9 Oxidation (M) _IQSLM(Oxidation (M))LKSL_ ENSG00000188992|ENST00000681601|LIPI;nc|ENSG00000188992|Q6XZB0-2|LIPI;nc|ENSG00000188992|Q6XZB0-3|LIPI;nc|ENSG00000188992|Q6XZB0-4|LIPI;nc|ENSG00000188992|Q6XZB0-5|LIPI;nc|ENSG00000188992|Q6XZB0-8|LIPI 19.256988751693697 0.3154191944385105 4 [{I|L}P]QT[YV]KS{I|L} 9 -1 [{I|L}P]QT[YV]K + + 20.093 13.804 1.6642 1.918 1.918 44.518 0.0 0.0 0.0 0.0 4.897562044633155 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 [{I|L}P]QT[YV]KS{I|L} 1.918 - 735 + 1 1.041 55236.5 1.0 8700 4823 13516 HBL1_DMSO_200M_050219_2,13525 HBL1_DMSO_200M_050219_2,13525,IQSLMLKSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13526 71.605 724.0 278280.0 25 0 16784.0 + -1 KQWETQPGFYSV 12 159 735.357035519538 1468.699518105876 2 735.3579589724541 MULTI CID FTMS 0 0 0 13516 236005.09375 0.688424777360648 -1 0.0935897827148437 10 Carbamidomethyl (C),Oxidation (M) _EELC(Carbamidomethyl (C))LRFM(Oxidation (M))KEV_ nc|ENSG00000086200|Q9UI26-2|IPO11;ENSG00000086200|ENST00000325324|IPO11 12.240655878213236 0.7805268987462184 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}SHTQ[PG]{M(Oxidation (M))|F}YW 12 -1 + 86.354 0.0 0.0 5.8796 5.8796 76.76 0.0 0.0 0.0 2.9761469314082944 4.785048350782802 2.9761469314082944 2.9761469314082944 0 1.3807196863200843 1.0457574905606752 2.122847372392646 1.2302046884880935 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}SHTQ[PG]{M(Oxidation (M))|F}YW;[{M(Oxidation (M))|F}T]VSHTQ[PG]{M(Oxidation (M))|F}YW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}SHPN[TA]{M(Oxidation (M))|F}YW;{[CT]|[{M(Oxidation (M))|F}G]}Y{M(Oxidation (M))|F}[PG]QTHSVMV;[{M(Oxidation (M))|F}T]VSHPN[TA]{M(Oxidation (M))|F}YW;{[CT]|[{M(Oxidation (M))|F}G]}Y{M(Oxidation (M))|F}[TA]NPHSVMV;[KQ]WETQ[PG]{M(Oxidation (M))|F}YW;{[TV]|[{I|L}S]}{[QN]|[E{I|L}]|[KN]}ETQ[PG]{M(Oxidation (M))|F}YW;[VS]{[{M(Oxidation (M))|F}H]|[RQ]}TTQ[PG]{M(Oxidation (M))|F}YW;{[QV]|[N{I|L}]|[RA]|[KV]}EMGKQPG{M(Oxidation (M))|F}YW 5.8796;5.677;5.6255;5.5538;5.4229;5.2997;5.253;5.2131;5.1304;5.0658 -;-;-;-;-;-;-;-;-;- 20176 1 1.041 141220.2 1.0 8701 4823 13516 HBL1_DMSO_200M_050219_2,13526 HBL1_DMSO_200M_050219_2,13526,EELCLRFMKEV False False KQWETQPGFYSV 71.605359 735.357958972454 7919365.0 13516.0 nc|ENSG00000086200|Q9UI26-2|IPO11;;ENSG00000086200|ENST00000325324|IPO11 10.905677795410156 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13527 71.618 737.0 326200.0 25 0 26247.0 + 17740 KPYNVYITV 9 200 548.8055534897369 1095.5965540462737 2 548.8062011599541 MULTI CID FTMS 0 0 0 13516 211672.71875 0.5733916844273331 -1 0.0935897827148437 11 Unmodified _KPYNVYITV_ ENSG00000119537|ENST00000645214|KDSR;ENST00000585750.1_1_18:61011618-61022465:-|nuORF;ENST00000586791.5_1_18:60999017-61011732:-|nuORF;nc|ENSG00000119537|Q06136-2|KDSR 78.14939416004806 0.0179651292570206 4 [{I|L}T]C(Carbamidomethyl (C))VKY{I|L}TV 9 5 + 96.921 0.0 0.0 8.8464 8.8464 84.102 0.0 0.0 0.0 2.5 16.478174818886373 2.5 2.5 0 0.8807196863200843 1.2218487496163564 1.1989700043360187 1.2302046884880935 [{I|L}T]C(Carbamidomethyl (C))VKY{I|L}TV;{[TV]|[{I|L}S]}{I|L}C(Carbamidomethyl (C))KY{I|L}TV;[{I|L}T]VC(Carbamidomethyl (C))KY{I|L}TV;[{I|L}T]C(Carbamidomethyl (C))KVY{I|L}TV;[{I|L}T]C(Carbamidomethyl (C))VYK{I|L}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NVKY{I|L}TV;[{I|L}T][CG]VKY{I|L}TV;{[TV]|[{I|L}S]}{I|L}C(Carbamidomethyl (C))YK{I|L}TV;[{I|L}T]VC(Carbamidomethyl (C))YK{I|L}TV;{[TV]|[{I|L}S]}{I|L}[CG]KY{I|L}TV 8.8464;8.6183;8.5717;8.5355;8.184;8.0477;8.006;7.9558;7.9092;7.7778 -;-;-;-;-;-;-;-;-;- 10663 1 1.041 190694.5 1.0 8702 4823 13516 HBL1_DMSO_200M_050219_2,13527 HBL1_DMSO_200M_050219_2,13527,KPYNVYITV True True KPYNVYITV 71.618139 548.806201159954 3771653.75 13516.0 ENST00000585750.1_1_18:61011618-61022465:-|nuORF;;ENSG00000119537|ENST00000645214|KDSR;;ENST00000586791.5_1_18:60999017-61011732:-|nuORF;;nc|ENSG00000119537|Q06136-2|KDSR 5.811766306559245 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13528 71.633 800.0 188640.0 25 0 21880.0 + 32341 RYPDIQASYL 10 151 613.3147365374683 1224.6149201417363 2 613.3148071169853 MULTI CID FTMS 0 0 0 13516 146485.78125 1.0 0 0.0 12 Unmodified _RYPDIQASYL_ ENSG00000101639|ENST00000506447|CEP192 26.020703789607367 0.3840598856887971 4 {I|L}QASY{I|L} 6 4 51.146 0.0 0.0 4.1765 0.0 0.0 531.2441510035255 0.0 531.2441510035255 0.0 26.827373417948422 0.0 0.0 0 0.5 0.0 0.5 0.0 + {I|L}QASY{I|L} 4.1765 + + 1068 1 1.041 114065.9 0.949999988079071 8703 4823 13516 HBL1_DMSO_200M_050219_2,13528 HBL1_DMSO_200M_050219_2,13528,RYPDIQASYL False True RYPDIQASYL 71.633147 613.3164 1644550.25 13516.0 ENSG00000101639|ENST00000506447|CEP192 6.294693787892659 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13529 71.647 800.0 300420.0 25 0 27216.0 + -1 VMVGELVGA 9 125 873.9143152313983 1745.8140775295965 2 874.4161865115166 MULTI CID FTMS 0 0 0 13516 135718.265625 0.0962701341180976 7 -0.8545913696289062 13 ENSG00000055044|ENST00000264279|NOP58 4 [VG]E{I|L}VMVG{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}D[WH] 15 -1 + 71.806 0.0 0.0 4.113 4.113 70.453 0.0 0.0 0.0 2.09688605333001 30.51536693443333 2.09688605333001 3.1078983295313662 0 0.0 1.0 1.5387254899964358 0.0 [VG]E{I|L}VMVG{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}D[WH];[{I|L}V]EGVMVG{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}D[WH];[VG]E{I|L}MVVG{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}D[WH];{[DA]|[EG]}{I|L}VVMVG{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}D[WH];{[QN]|[E{I|L}]|[KN]}GVVMVG{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}D[WH];[VG]EMV{I|L}VG{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}D[WH];[VG]E{I|L}VVMG{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}D[WH];[VG]EM{I|L}VVG{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}D[WH];{[DA]|[EG]}V{I|L}VMVG{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}D[WH];[{I|L}V]EGMVVG{[YD]|[{M(Oxidation (M))|F}M]}N{I|L}D[WH] 4.113;3.935;3.7974;3.7919;3.7626;3.6812;3.6534;3.625;3.6195;3.6194 -;-;-;-;-;-;-;-;-;- 46731 1 1.041 160796.3 0.7900000214576721 8704 4823 13516 HBL1_DMSO_200M_050219_2,13529 HBL1_DMSO_200M_050219_2,13529, False False VMVGELVGA 71.646995 873.9152 5232085.0 13516.0 ENSG00000055044|ENST00000264279|NOP58 5.236878395080566 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13530 71.661 800.0 282720.0 25 0 19470.0 + 3693 DAFINPHL 8 189 463.74037855106775 925.4662041689356 2 463.7404662966728 MULTI CID FTMS 0 0 0 13516 135978.578125 1.0 0 0.0 14 Unmodified _DAFINPHL_ ENSG00000163050|ENST00000366777|COQ8A;ENST00000478406.5_1_1:227170215-227170924:+|nuORF;ENST00000485462.5_1_1:227165121-227174435:+|nuORF;nc|ENSG00000163050|Q8NI60-3|COQ8A;nc|ENSG00000163050|Q8NI60-4|COQ8A 30.22481116460888 0.4082965392918993 4 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}NPH{I|L} 8 0 + 63.155 0.0 0.0 6.8241 6.8241 83.633 0.0 0.0 0.0 15.687526620787551 4.771212547196626 4.771212547196626 4.771212547196626 0 0.7059771852360797 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}NPH{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}NP{I|L}H;{[DA]|[EG]}{M(Oxidation (M))|F}VQPH{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SV;{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}GGPH{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}VQP{I|L}H;{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}GGP{I|L}H;{[DA]|[EG]}{M(Oxidation (M))|F}V[AG]PH{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}V[AG]P{I|L}H;{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}[HQ]PV 6.8241;6.3085;5.9833;5.9566;5.8233;5.4677;5.3077;4.9825;4.4669;3.7869 +;-;-;-;-;-;-;-;-;- + 1412 + 1 1.041 176203.0 0.6800000071525574 8705 4823 13516 HBL1_DMSO_200M_050219_2,13530 HBL1_DMSO_200M_050219_2,13530,DAFINPHL False True DAFINPHL 71.660809 463.740466296673 1314894.25 13516.0 nc|ENSG00000163050|Q8NI60-4|COQ8A;;ENST00000478406.5_1_1:227170215-227170924:+|nuORF;;ENST00000485462.5_1_1:227165121-227174435:+|nuORF;;nc|ENSG00000163050|Q8NI60-3|COQ8A;;ENSG00000163050|ENST00000366777|COQ8A 5.771679242451985 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13531 71.676 800.0 217110.0 25 0 41597.0 -1 0 91 1106.445536294556 3316.314779483868 3 1107.449511706829 MULTI CID FTMS 0 0 0 13516 124764.8046875 0.2113148954030702 -3 0.2846603393554687 15 4 Y[YG]YCT{I|L}NK 9 -1 24.457 0.0 0.0 0.73747 0.0 0.0 1618.5679055598432 589.2405489557249 2207.808454515568 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.426935982160881 Y[YG]YCT{I|L}NK 0.73747 - 518 + 1 1.041 141472.8 0.699999988079071 8706 4823 13516 HBL1_DMSO_200M_050219_2,13531 HBL1_DMSO_200M_050219_2,13531, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13532 71.69 800.0 133840.0 25 0 30641.0 -1 0 67 1066.095816565682 3195.265620297246 3 1066.428393542767 MULTI CID FTMS 0 0 0 13516 107034.8203125 0.2225870162728102 -3 0.2846603393554687 16 4 W{M(Oxidation (M))|F}{I|L}K 4 -1 13.532 0.0 0.0 0.4235 0.0 0.0 2164.72712039666 453.1977938287719 2617.924914225431 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W{M(Oxidation (M))|F}{I|L}K 0.4235 - 128 + 1 1.041 95174.3 0.699999988079071 8707 4823 13516 HBL1_DMSO_200M_050219_2,13532 HBL1_DMSO_200M_050219_2,13532, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13533 71.704 800.0 432650.0 25 0 66451.0 -1 0 117 1175.7746942171984 3524.302253251796 3 1176.116259753704 MULTI CID FTMS 0 0 0 13516 108104.359375 0.0866135030293974 -3 0.2846603393554687 17 4 GY{M(Oxidation (M))|F}SA 5 -1 12.818 0.0 0.0 0.3637 0.0 0.0 1944.66656977487 1051.381409795751 2996.047979570621 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 GY{M(Oxidation (M))|F}SA 0.3637 - 390 + 1 1.041 243903.6 0.6399999856948853 8708 4823 13516 HBL1_DMSO_200M_050219_2,13533 HBL1_DMSO_200M_050219_2,13533, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13534 71.719 800.0 176010.0 25 0 18878.0 + 36342 SYPDFLHKM 9 145 379.8513900502092 1136.5323407508276 3 379.8512145876884 MULTI CID FTMS 0 0 0 13516 97636.8671875 0.7401501109201869 1 -0.1839523315429687 18 Unmodified _SYPDFLHKM_ ENSG00000122482|ENST00000337393|ZNF644;nc|ENSG00000122482|Q9H582-2|ZNF644 15.738622578938676 0.4106572216562794 4 {[{M(Oxidation (M))|F}C]|[YS]}PD{M(Oxidation (M))|F}{I|L}HKM 9 0 + 28.653 0.0 0.0 2.5211 2.5211 68.52 0.0 0.0 0.0 4.488482982292382 9.436983199093326 4.488482982292382 4.488482982292382 0 0.2614393726401688 0.0 0.0 0.2302046884880938 + + {[{M(Oxidation (M))|F}C]|[YS]}PD{M(Oxidation (M))|F}{I|L}HKM;{NN|[MP]|[D{I|L}]|[EV]}[VS]{I|L}{M(Oxidation (M))|F}DP[MT];[DP][RV]N[HA]P[MT];{[{M(Oxidation (M))|F}C]|[YS]}PD{M(Oxidation (M))|F}[HK]{M(Oxidation (M))|F}P;{[{M(Oxidation (M))|F}C]|[YS]}PD{M(Oxidation (M))|F}[HK]M{I|L};[HK][YV]{M(Oxidation (M))|F}DP[MT];{[{M(Oxidation (M))|F}C]|[YS]}PD{M(Oxidation (M))|F}[HK]{I|L}M;{[TV]|[{I|L}S]}[DV]{I|L}{M(Oxidation (M))|F}DP[MT];{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}H]|[RQ]}K[{M(Oxidation (M))|F}V][MT];{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}][YE]P[MT] 2.5211;2.1262;1.6907;1.4709;1.3706;1.316;1.2681;1.206;1.116;1.0061 +;-;-;-;-;-;-;-;-;- + 425 + 1 1.041 122903.4 0.4900000095367431 8709 4823 13516 HBL1_DMSO_200M_050219_2,13534 HBL1_DMSO_200M_050219_2,13534,SYPDFLHKM False True SYPDFLHKM 71.718567 379.851214587688 1923254.5 13516.0 ENSG00000122482|ENST00000337393|ZNF644;;nc|ENSG00000122482|Q9H582-2|ZNF644 7.648575782775879 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13535 71.732 800.0 128890.0 25 0 10183.0 + -1 FTDWCYEFEDY 11 124 787.7926956431572 1573.5708383531144 2 788.2963744997978 MULTI CID FTMS 0 0 0 13516 90245.28125 1.0 0 0.0 19 Carbamidomethyl (C) _FTDWC(Carbamidomethyl (C))YEFEDY_ REV__ENSG00000179750|ENST00000333467|APOBEC3B;REV__nc|ENSG00000179750|Q9UH17-3|APOBEC3B 0.3506318815782774 0.8734936314171269 4 [YN]G{M(Oxidation (M))|F}V[VG]AQQNA 12 -1 36.029 0.0 0.0 2.2896 0.0 0.0 0.0 322.0123416092269 322.0123416092269 8.801410352873482 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.4247425010840047 [YN]G{M(Oxidation (M))|F}V[VG]AQQNA 2.2896 - 1539 1 1.041 76660.4 0.6499999761581421 8710 4823 13516 HBL1_DMSO_200M_050219_2,13535 HBL1_DMSO_200M_050219_2,13535,FTDWCYEFEDY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13537 71.737 21.0 1543500.0 25 0 168020.0 + 44436 YMIDPSGVSY 10 61 566.2549721209491 1130.495391308698 2 566.2557861208916 MULTI CID FTMS 0 0 0 13536 1466644.5 0.0449304677228222 4 -0.3872222900390625 1 Unmodified _YMIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 20.453626601364224 0.5043500229302764 4 SY 2 8 24.024 0.0 0.0 2.1251 0.0 0.0 862.3883743952721 0.0 862.3883743952721 0.0 12.60373872229545 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + SY 2.1251 + + 36 + 1 1.04 31581.4 1.0 8711 4824 13536 HBL1_DMSO_200M_050219_2,13537 HBL1_DMSO_200M_050219_2,13537,YMIDPSGVSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13538 71.738 5.1 43688000.0 25 0 11612000.0 -1 0 55 1162.7987859000227 3485.374528300268 3 1163.462817370892 MULTI CID FTMS 0 0 0 13536 58793312.0 0.4321717743616185 -2 0.2775421142578125 2 4 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYGYW 7 -1 12.184 0.0 0.0 0.34957 0.0 0.0 1310.4620524038485 1132.5076441201868 2442.9696965240355 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYGYW 0.34957 - 60 + 1 1.04 189888.4 1.0 8712 4824 13536 HBL1_DMSO_200M_050219_2,13538 HBL1_DMSO_200M_050219_2,13538, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13539 71.739 4.4 12431000.0 25 0 1932900.0 + 3098 AVPDEIPPLE 10 76 540.2849079987573 1078.5552630643144 2 540.2852661013603 MULTI CID FTMS 0 0 0 13536 11907458.0 0.3961975152480433 -3 0.3068466186523437 3 Unmodified _AVPDEIPPLE_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 30.7034409873982 0.2788461460996952 4 [DP]E{I|L}AVPP{I|L}E 10 4 [DP]E{I|L}AV + + 36.146 24.143 3.8672 3.3514 3.3514 46.771 0.0 0.0 0.0 0.0 -0.3376444372567277 -0.3376444372567277 0.0 0 0.4247425010840047 0.0 0.7742275032520141 0.0 [DP]E{I|L}AVPP{I|L}E 3.3514 - 234 + 1 1.04 48769.9 1.0 8713 4824 13536 HBL1_DMSO_200M_050219_2,13539 HBL1_DMSO_200M_050219_2,13539,AVPDEIPPLE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13540 71.74 11.0 5213600.0 25 0 367640.0 + 3994 DALRPPLQNI 10 86 568.8248093279032 1135.6350657226062 2 568.8251220583916 MULTI CID FTMS 0 0 0 13536 4755115.5 0.9621140622756956 -2 0.2775421142578125 4 Unmodified _DALRPPLQNI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 43.77239144664712 0.1177314611616471 4 {[DA]|[EG]}[R{I|L}][KP]VG 8 5 30.111 0.0 0.0 2.6515 0.0 0.0 0.0 296.12020875109016 296.12020875109016 -4.229625957008949 0.0 -4.229625957008949 0.0 0 0.0 2.0 0.0 1.274227503252014 {[DA]|[EG]}[R{I|L}][KP]VG 2.6515 - 144 1 1.04 51645.6 1.0 8714 4824 13536 HBL1_DMSO_200M_050219_2,13540 HBL1_DMSO_200M_050219_2,13540,DALRPPLQNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13541 71.742 9.1 5536300.0 25 0 451140.0 8066 ENVGLLPLE 9 81 492.27452508588567 982.5344972385714 2 492.2745239138603 MULTI CID FTMS 0 0 0 13536 4359300.0 1.0 0 0.0 5 Unmodified _ENVGLLPLE_ ENSG00000164946|ENST00000380880|FREM1;ENST00000486223.1_1_9:14751839-14775864:-|nuORF;nc|ENSG00000164946|Q5H8C1-2|FREM1;nc|ENSG00000164946|Q5H8C1-4|FREM1 10.823927491677226 0.5436922275383211 4 [DP]VVNE 6 7 27.638 0.0 0.0 2.8129 0.0 0.0 0.0 326.2081782290589 326.2081782290589 13.03395642852614 0.0 0.0 0.0 0 0.0 0.0 0.25 0.4247425010840047 [DP]VVNE 2.8129 - 117 1 1.04 44717.0 1.0 8715 4824 13536 HBL1_DMSO_200M_050219_2,13541 HBL1_DMSO_200M_050219_2,13541,ENVGLLPLE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13542 71.743 17.0 3027900.0 25 0 345970.0 + 41229 VPFSHVNIV 9 76 506.2846360896961 1010.5547192461922 2 506.2848083376884 MULTI CID FTMS 0 0 0 13536 2702034.25 1.0 0 0.0 6 Unmodified _VPFSHVNIV_ ENSG00000127463|ENST00000477853|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1 32.78568957990786 0.1150597335874693 4 VP 2 7 38.756 0.0 0.0 3.8351 0.0 0.0 0.0 811.4118746393186 811.4118746393186 8.561514948293478 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + VP 3.8351 + + 493 + 1 1.04 46753.5 1.0 8716 4824 13536 HBL1_DMSO_200M_050219_2,13542 HBL1_DMSO_200M_050219_2,13542,VPFSHVNIV True True VPFSHVNIV 71.742775 506.284808337688 22243544.0 13536.0 nc|ENSG00000127463|Q8N766-4|EMC1;;nc|ENSG00000127463|Q8N766-2|EMC1;;ENSG00000127463|ENST00000477853|EMC1;;nc|ENSG00000127463|Q8N766-3|EMC1 6.495060761769612 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13543 71.746 175.0 1790900.0 25 0 482790.0 -1 0 71 1168.4556193327874 3502.3450285985623 3 1168.789721667767 MULTI CID FTMS 0 0 0 13536 2443358.75 1.0 0 0.0 7 4 YG 2 -1 10.969 0.0 0.0 0.31319 0.0 0.0 1797.5993398689732 1481.6493670427478 3279.248706911721 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.31319 - 104 + 1 1.04 255056.8 1.0 8717 4824 13536 HBL1_DMSO_200M_050219_2,13543 HBL1_DMSO_200M_050219_2,13543, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13544 71.747 21.0 1771700.0 25 0 125520.0 + 25077 MPVIPMNTI 9 81 516.2672060212747 1030.5198591093492 2 516.2674438357353 MULTI CID FTMS 0 0 0 13536 1736612.125 1.0 0 0.0 8 Oxidation (M) _MPVIPM(Oxidation (M))NTI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 42.96799951952854 0.0591636306142405 4 [VP]M{I|L}P{M(Oxidation (M))|F} 6 5 30.934 0.0 0.0 3.0018 0.0 0.0 0.0 343.156292630182 343.156292630182 8.473732280301789 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [VP]M{I|L}P{M(Oxidation (M))|F} 3.0018 - 127 1 1.04 36858.0 1.0 8718 4824 13536 HBL1_DMSO_200M_050219_2,13544 HBL1_DMSO_200M_050219_2,13544,MPVIPMNTI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13545 71.749 36.0 2090000.0 25 0 333960.0 + 21664 LPLLLHLF 8 87 483.3108890273498 964.6072251214996 2 483.3109313845634 MULTI CID FTMS 0 0 0 13536 1449020.875 0.6106357283759473 1 -0.0411834716796875 9 Unmodified _LPLLLHLF_ REV__ENSG00000100429|ENST00000216271|HDAC10;REV__ENST00000415993.5_1_22:50686492-50688322:-|nuORF;REV__ENST00000483222.5_1_22:50686861-50687933:-|nuORF;REV__ENST00000497036.5_1_22:50684150-50687609:-|nuORF;REV__ENST00000498366.5_1_22:50686861-50689256:-|nuORF;REV__nc|ENSG00000100429|Q969S8-2|HDAC10;REV__nc|ENSG00000100429|Q969S8-4|HDAC10;REV__nc|ENSG00000100429|Q969S8-5|HDAC10 52.33426049586781 0.1282678332820461 4 {I|L}P{I|L}{I|L}V 5 -1 66.81 0.0 0.0 6.9262 0.0 0.0 0.0 426.2119234674438 426.2119234674438 53.31546893236258 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.0 0.0 {I|L}P{I|L}{I|L}V 6.9262 - 91 + 1 1.04 62113.3 1.0 8719 4824 13536 HBL1_DMSO_200M_050219_2,13545 HBL1_DMSO_200M_050219_2,13545,LPLLLHLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13546 71.75 36.0 1306100.0 25 0 154580.0 + 17833 KQLDDLKVEL 10 84 600.8453419844042 1199.6761310356085 2 600.8457519412041 MULTI CID FTMS 0 0 0 13536 1182651.0 0.004400745520974 9 -0.9431686401367188 10 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 79.42699986076722 0.0175374121712975 4 {NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVE{I|L} 10 4 + 78.017 0.0 0.0 6.5031 6.5031 78.82 0.0 0.0 0.0 12.17483944213906 16.532125137753432 12.17483944213906 2.709967230360036 0 0.8882104921644451 1.3979400086720375 0.6861818737241735 0.2887254899964357 {NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}KQKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}K[AG]KVE{I|L};{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}[NG]{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}[NG]{I|L}KVE{I|L};{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}RQKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}RQKVE{I|L};{[TV]|[{I|L}S]}QQKQKVE{I|L};[KQ]{I|L}DD{I|L}KVE{I|L} 6.5031;6.2773;5.7504;5.5133;5.4883;5.4883;5.3629;5.3629;4.9652;4.8302 -;-;-;-;-;-;-;-;-;+ + 631 1 1.04 38790.8 1.0 8720 4824 13536 HBL1_DMSO_200M_050219_2,13546 HBL1_DMSO_200M_050219_2,13546,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13547 71.755 290.0 721770.0 25 0 58288.0 -1 0 125 882.0843687297199 3524.3083690524795 4 882.3356811404228 MULTI CID FTMS 0 0 0 13536 1150066.375 1.0 0 0.0 11 4 {M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV] 8 -1 31.558 0.0 0.0 0.89545 0.0 0.0 2546.842439952673 0.0 2546.842439952673 0.0 14.814636462084614 0.0 0.0 0 0.0 0.0 0.0 0.6203715150305281 {M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV] 0.89545 - 585 + 1 1.04 158860.0 1.0 8721 4824 13536 HBL1_DMSO_200M_050219_2,13547 HBL1_DMSO_200M_050219_2,13547, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13548 71.756 31.0 2062600.0 25 0 261230.0 + 27719 PLLPLSELHA 10 93 545.3171335917162 1088.6197142502324 2 545.3169433474541 MULTI CID FTMS 0 0 0 13536 1107519.375 0.3942811103936645 4 -0.3872222900390625 12 Unmodified _PLLPLSELHA_ REV__ENSG00000119608|ENST00000556489|PROX2;REV__nc|ENSG00000119608|Q3B8N5|PROX2 15.847184025352805 0.5816416552707754 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VHH{I|L}KV 9 -1 + 43.939 0.0 0.0 4.0362 4.0362 71.534 0.0 0.0 0.0 4.025688405105221 4.025688405105221 4.025688405105221 4.025688405105221 0 0.0 0.0 0.0 0.5709991640913001 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VHH{I|L}KV;{[QN]|[E{I|L}]|[KN]}YVKV{I|L}[EP];{[QN]|[E{I|L}]|[KN]}VYKV{I|L}[EP];[YE]{I|L}VKV{I|L}[EP];{[QN]|[E{I|L}]|[KN]}YVVK{I|L}[EP];{[QN]|[E{I|L}]|[KN]}VKYV{I|L}[EP];[YE]V{I|L}KV{I|L}[EP];{[QN]|[E{I|L}]|[KN]}VYVK{I|L}[EP];[{I|L}V]EYKV{I|L}[EP];[YE]{I|L}VVK{I|L}[EP] 4.0362;3.6664;3.5047;3.1772;3.1134;3.0664;3.0154;2.9516;2.6499;2.6241 -;-;-;-;-;-;-;-;-;- 246 + 1 1.04 53406.4 1.0 8722 4824 13536 HBL1_DMSO_200M_050219_2,13548 HBL1_DMSO_200M_050219_2,13548,PLLPLSELHA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13549 71.758 57.0 820100.0 25 0 42771.0 + -1 VPTAMCIMVL 10 73 575.78532856871 1149.55610420422 2 575.7859985232353 MULTI CID FTMS 0 0 0 13536 1032391.75 1.0 0 0.0 13 Carbamidomethyl (C),Oxidation (M) _VPTAM(Oxidation (M))C(Carbamidomethyl (C))IMVL_ REV__ENSG00000023839|ENST00000647814|ABCC2 7.910154910731844 0.6900473968920092 4 VPS 3 -1 22.307 0.0 0.0 1.9405 0.0 0.0 149.10518975285123 714.2779635065061 863.3831532593574 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 VPS 1.9405 - 53 + 1 1.04 43257.5 1.0 8723 4824 13536 HBL1_DMSO_200M_050219_2,13549 HBL1_DMSO_200M_050219_2,13549,VPTAMCIMVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13550 71.759 54.0 961100.0 25 0 106200.0 + 7722 ELDKENFKQLL 11 77 459.5856472048202 1375.7351122146606 3 459.5856201052666 MULTI CID FTMS 0 0 0 13536 961760.9375 0.7625174225420341 -2 0.2775421142578125 14 Unmodified _ELDKENFKQLL_ REV__ENSG00000136861|ENST00000349780|CDK5RAP2;REV__ENST00000483412.5_1_9:123170580-123298708:-|nuORF;REV__nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;REV__nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;REV__nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 10.150570793230772 0.8240029794358671 4 [K{I|L}]{I|L}NMNKQ{M(Oxidation (M))|F}[Q{I|L}] 11 -1 + 34.358 0.0 0.0 2.4974 2.4974 73.065 0.0 0.0 0.0 5.227865392785013 10.646202827075465 5.227865392785013 9.128498242811002 0 0.0 0.0 0.0 0.2887254899964357 [K{I|L}]{I|L}NMNKQ{M(Oxidation (M))|F}[Q{I|L}];[K{I|L}]{I|L}NMNK[AG]{M(Oxidation (M))|F}[Q{I|L}];[K{I|L}]{I|L}NMGGKQ{M(Oxidation (M))|F}[Q{I|L}];[K{I|L}]{I|L}GGMNKQ{M(Oxidation (M))|F}[Q{I|L}];[K{I|L}]{I|L}EDDKQ{M(Oxidation (M))|F}[Q{I|L}];[K{I|L}]{I|L}GGMGGKQ{M(Oxidation (M))|F}[Q{I|L}];[K{I|L}]{I|L}GGMNK[AG]{M(Oxidation (M))|F}[Q{I|L}];[K{I|L}]{I|L}NMGGK[AG]{M(Oxidation (M))|F}[Q{I|L}];{[MS]|[{M(Oxidation (M))|F}A]}[RP]QNKQ{M(Oxidation (M))|F}[Q{I|L}];{[VA]|[{I|L}G]}[NS][WR]KQ{M(Oxidation (M))|F}[Q{I|L}] 2.4974;1.8339;1.8339;1.8339;1.3533;1.1725;1.1725;1.1725;1.1563;0.87909 -;-;-;-;-;-;-;-;-;- 292 1 1.04 52903.7 1.0 8724 4824 13536 HBL1_DMSO_200M_050219_2,13550 HBL1_DMSO_200M_050219_2,13550,ELDKENFKQLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13551 71.76 49.0 1272300.0 25 0 200990.0 + 9118 FFPDKPITQY 10 71 628.3213562907354 1254.6281596482706 2 628.3225585818291 MULTI CID FTMS 0 0 0 13536 932883.875 0.0388610647307642 9 -0.9431686401367188 15 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 41.95555342248728 0.1369168616057562 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]TQY 10 2 + 50.763 0.0 0.0 4.046 4.046 48.8 0.0 0.0 0.0 30.61243137115873 1.813637641589878 1.813637641589878 0.0 0 0.3807196863200844 0.0 0.7059771852360797 0.75 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]TQY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}]QY;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]TQY;[DP]K[{I|L}P]TQY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDP[K{I|L}]T[AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDPT[K{I|L}][AG]Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PDK[{I|L}P]T[AG]Y;[DP]KV{[HG]|PP}{[ET]|[MV]}P[{M(Oxidation (M))|F}E];[DP]K[{I|L}P]T[AG]Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[DP]PT[K{I|L}]QY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 4.046;4.046;4.0267;3.1822;3.0563;3.0563;3.037;2.7608;2.4518;2.4452 -;-;+;-;-;-;-;-;-;- + 296 + 1 1.04 54518.3 1.0 8725 4824 13536 HBL1_DMSO_200M_050219_2,13551 HBL1_DMSO_200M_050219_2,13551,FFPDKPITQY False True FFPDKPITQY 71.760444 628.322558581829 2522120256.0 13536.0 ENSG00000244038|ENST00000602624|DDOST;;nc|ENSG00000244038|P39656|DDOST;;nc|ENSG00000244038|P39656-3|DDOST;;nc|ENSG00000244038|P39656-2|DDOST 8.257656892140707 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13552 71.767 378.0 877680.0 25 0 114930.0 -1 0 118 878.5877281921317 3510.321806902127 4 878.8390991091728 MULTI CID FTMS 0 0 0 13536 829410.25 0.4842139108488788 -2 0.2775421142578125 16 4 E 1 -1 9.732 0.0 0.0 0.27724 0.0 0.0 2631.863995478102 746.3850802057249 3378.249075683827 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E 0.27724 - 832 + 1 1.04 275518.1 1.0 8726 4824 13536 HBL1_DMSO_200M_050219_2,13552 HBL1_DMSO_200M_050219_2,13552, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13553 71.769 66.0 955360.0 25 0 151330.0 + 23115 LSPEHVLHIR 10 92 400.8994449725738 1199.6765055179214 3 401.5710937380791 MULTI CID FTMS 0 0 0 13536 777118.1875 0.0229355774010841 9 -0.9431686401367188 17 Unmodified _LSPEHVLHIR_ REV__ENST00000476975.5_1_2:97499124-97506236:-|nuORF 8.97624648632007 0.6851160995914376 4 {[TV]|[{I|L}S]}{[TV]|[{I|L}S]}[DN]K{I|L} 8 -1 24.627 0.0 0.0 2.0528 0.0 0.0 0.0 326.1698276216902 326.1698276216902 8.824543621168388 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{[TV]|[{I|L}S]}[DN]K{I|L} 2.0528 - 157 1 1.04 54212.7 1.0 8727 4824 13536 HBL1_DMSO_200M_050219_2,13553 HBL1_DMSO_200M_050219_2,13553,LSPEHVLHIR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13554 71.77 59.0 1084700.0 25 0 116390.0 + 39412 VALFESSSYV 10 77 551.275357734048 1100.536162534896 2 551.2755615115166 MULTI CID FTMS 0 0 0 13536 769577.0 0.4499823672215236 -4 0.4686126708984375 18 Unmodified _VALFESSSYV_ REV__ENSG00000099308|ENST00000687212|MAST3;REV__nc|ENSG00000099308|O60307|MAST3 10.073929032068715 0.6785112666868882 4 {[VA]|[{I|L}G]}PDE{I|L}P 7 -1 52.479 0.0 0.0 4.7685 0.0 0.0 0.0 376.14960657291255 376.14960657291255 25.27769742300567 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[VA]|[{I|L}G]}PDE{I|L}P 4.7685 - 91 + 1 1.04 59873.1 1.0 8728 4824 13536 HBL1_DMSO_200M_050219_2,13554 HBL1_DMSO_200M_050219_2,13554,VALFESSSYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13555 71.772 52.0 1674100.0 25 0 209430.0 + 7550 HTVGELIEV 9 101 498.7721842658555 995.529815598511 2 498.7722045779228 MULTI CID FTMS 0 0 0 13536 754983.1875 0.2404371555332628 -2 0.2775421142578125 19 Unmodified _EIHSGLLEV_ ENST00000496548.1_1_7:1855708-1869233:-|nuORF;nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1;ENSG00000002822|ENST00000265854|MAD1L1 50.855029805455786 0.0384952370514206 4 {NN|[MP]|[D{I|L}]|[EV]}A[HS]{I|L}{I|L}EV 9 3 + 47.947 0.0 0.0 4.8162 4.8162 75.697 0.0 0.0 0.0 4.781450697326164 4.781450697326164 4.781450697326164 4.781450697326164 0 0.6549471895720985 0.6575773191777937 1.4698565171985374 0.0 {NN|[MP]|[D{I|L}]|[EV]}A[HS]{I|L}{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}{I|L}[YN]EV;{[QN]|[E{I|L}]|[KN]}G[HS]{I|L}{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}{I|L}[YN]D{I|L};[HT][VG]E{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[YN]{I|L}{I|L}[{M(Oxidation (M))|F}V];HH[YG]{I|L}RT{I|L};{NN|[MP]|[D{I|L}]|[EV]}A[YR]{I|L}[{M(Oxidation (M))|F}V];[{M(Oxidation (M))|F}V]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{[TV]|[{I|L}S]}T{I|L};HH{I|L}[YG]RT{I|L} 4.8162;4.336;4.0234;3.8107;3.429;1.7926;1.7365;1.6671;1.5961;1.5596 -;-;-;-;-;-;-;-;-;- 226 1 1.04 71988.6 1.0 8729 4824 13536 HBL1_DMSO_200M_050219_2,13555 HBL1_DMSO_200M_050219_2,13555,EIHSGLLEV True True HTVGELIEV 71.771681 498.772204577923 28188994.0 13536.0 ENST00000496548.1_1_7:1855708-1869233:-|nuORF;;nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1;;ENSG00000002822|ENST00000265854|MAD1L1 5.037065188090007 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13556 71.774 90.0 878680.0 25 0 111850.0 + 40585 VKPSVPLF 8 94 443.773538906193 885.532524879186 2 443.7737609744072 MULTI CID FTMS 0 0 0 13536 758357.5 0.0442551970966403 48 -4.704010009765625 20 Unmodified _VKPSVPLF_ REV__ENSG00000165792|ENST00000339374|METTL17;REV__ENST00000555902.6_1_14:21458708-21463066:+|nuORF;REV__nc|ENSG00000165792|Q9H7H0-2|METTL17;REV__nc|ENSG00000165792|Q9H7H0-3|METTL17 32.30548876998284 0.3644845974844379 4 {I|L}PYV 4 -1 49.469 0.0 0.0 5.5864 0.0 0.0 0.0 410.2420137994751 410.2420137994751 18.26606256887672 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PYV 5.5864 - 498 + 1 1.04 68128.6 1.0 8730 4824 13536 HBL1_DMSO_200M_050219_2,13556 HBL1_DMSO_200M_050219_2,13556,VKPSVPLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13558 71.778 92.0 648140.0 25 0 66431.0 + 35136 SQYQRFTYL 9 82 603.3013945825019 1204.5882362318036 2 603.3015624880791 MULTI CID FTMS 0 0 0 13557 629006.8125 0.6586995902938159 2 -0.2976226806640625 1 Unmodified _SQYQRFTYL_ ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-17|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1 55.23464941255904 0.0288927259679799 4 NTY{I|L} 4 6 35.948 0.0 0.0 2.9843 0.0 0.0 695.342088767775 0.0 695.342088767775 0.0 2.118806617312636 0.0 0.0 0 0.7742275032520141 0.0 0.3252574989159953 0.3807196863200844 NTY{I|L} 2.9843 - 138 1 1.04 47143.1 1.0 8731 4825 13557 HBL1_DMSO_200M_050219_2,13558 HBL1_DMSO_200M_050219_2,13558,SQYQRFTYL True True SQYQRFTYL 71.778033 603.301562488079 20045284.0 13557.0 nc|ENSG00000131196|O95644-10|NFATC1;;nc|ENSG00000131196|O95644-5|NFATC1;;ENSG00000131196|ENST00000427363|NFATC1;;nc|ENSG00000131196|O95644-11|NFATC1;;nc|ENSG00000131196|O95644-8|NFATC1;;nc|ENSG00000131196|O95644-2|NFATC1;;nc|ENSG00000131196|O95644-6|NFATC1;;nc|ENSG00000131196|O95644-4|NFATC1;;nc|ENSG00000131196|O95644-17|NFATC1;;nc|ENSG00000131196|O95644-3|NFATC1 7.370587666829427 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13559 71.78 79.0 1336600.0 25 0 184140.0 + 15444 IPPVAVRL 8 89 432.7870939984427 863.5596350636854 2 432.7871276736259 MULTI CID FTMS 0 0 0 13557 946779.375 0.6158765344904146 -3 0.3187255859375 2 Unmodified _IPPVAVRL_ ENSG00000111642|ENST00000544040|CHD4;ENST00000535717.1_1_12:6679844-6680280:-|nuORF;nc|ENSG00000111642|Q14839-2|CHD4 23.1484247019978 0.5573009939494978 4 {I|L}PPVA 5 3 55.701 0.0 0.0 6.4502 0.0 0.0 0.0 383.2423189752563 383.2423189752563 45.3224716362703 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPVA 6.4502 + + 73 + 1 1.04 88215.1 1.0 8732 4825 13557 HBL1_DMSO_200M_050219_2,13559 HBL1_DMSO_200M_050219_2,13559,IPPVAVRL False True IPPVAVRL 71.779833 432.787127673626 36950076.0 13557.0 ENSG00000111642|ENST00000544040|CHD4;;ENST00000535717.1_1_12:6679844-6680280:-|nuORF;;nc|ENSG00000111642|Q14839-2|CHD4 2.2334666649500527 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13560 71.781 27.0 2685500.0 25 0 522220.0 + 18342 KVLEYVIKV 9 94 545.8471048635333 1089.6796567938666 2 545.8473388552666 MULTI CID FTMS 0 0 0 13557 1630378.875 0.1144494977326014 -2 0.2251358032226562 3 Unmodified _KVLEYVIKV_ ENSG00000198681|ENST00000356661|MAGEA1 49.52724829834842 0.0414064571532091 4 KV{I|L}EYV{I|L}VK 9 2 + 69.339 0.0 0.0 6.3632 6.3632 73.802 0.0 0.0 0.0 16.478174818886373 0.2996322337744317 0.2996322337744317 0.2996322337744317 0 2.517220322351953 0.0 1.0 0.3054621874040891 KV{I|L}EYV{I|L}VK;KV{I|L}EYV{I|L}KV 6.3632;6.3357 -;+ + 231 + 1 1.04 59214.8 1.0 8733 4825 13557 HBL1_DMSO_200M_050219_2,13560 HBL1_DMSO_200M_050219_2,13560,KVLEYVIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13561 71.788 407.0 544630.0 25 0 129530.0 -1 0 90 1180.7630081612006 3539.267195083802 3 1181.431567370892 MULTI CID FTMS 0 0 0 13557 843088.6875 0.8027420684001405 -1 0.0411834716796875 4 4 YGY 3 -1 13.188 0.0 0.0 0.37261 0.0 0.0 1781.59913029185 1371.4937309936986 3153.0928612855487 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YGY 0.37261 - 111 + 1 1.04 171219.0 1.0 8734 4825 13557 HBL1_DMSO_200M_050219_2,13561 HBL1_DMSO_200M_050219_2,13561, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13562 71.79 84.0 865960.0 25 0 103670.0 + + 7806 KILEDDKGAFQL 12 93 688.8732429358736 1375.731932938547 2 688.8749877810478 MULTI CID FTMS 0 0 0 13557 774071.0 0.7563345298371459 -1 0.0411834716796875 5 Unmodified _ELIKDFQKQDI_ ENST00000477822.2_1_6:153294165-153294291:-|nuORF;ENSG00000112029|ENST00000229758|FBXO5;nc|ENSG00000112029|Q9UKT4-2|FBXO5 29.43715596616401 0.4010092210691691 4 K{I|L}{I|L}EDDKQ{M(Oxidation (M))|F}Q{I|L} 11 -1 + 111.05 0.0 0.0 8.0721 8.0721 90.945 0.0 0.0 0.0 62.11758134947864 15.109860684774318 15.109860684774318 9.128498242810991 0 2.885151878060192 0.8239087409443188 0.4247425010840047 1.1989700043360187 K{I|L}{I|L}EDDKQ{M(Oxidation (M))|F}Q{I|L};K{I|L}{I|L}EDDK[AG]{M(Oxidation (M))|F}Q{I|L};KN[K{I|L}]DDKQ{M(Oxidation (M))|F}Q{I|L};[K{I|L}]{I|L}EDDKQ{M(Oxidation (M))|F}Q{I|L};KN[K{I|L}]DDK[AG]{M(Oxidation (M))|F}Q{I|L};KGG[K{I|L}]DDKQ{M(Oxidation (M))|F}Q{I|L};[K{I|L}]{I|L}EDDKQ{M(Oxidation (M))|F}[AG]{I|L};{I|L}{I|L}KEDDKQ{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]DDKQ{M(Oxidation (M))|F}Q{I|L};{I|L}{I|L}KEDDKQ{M(Oxidation (M))|F}[AG]{I|L} 8.0721;7.4085;5.7663;5.67;5.1027;5.1027;5.0065;4.8225;4.2056;4.159 -;-;-;-;-;-;-;-;-;- 1275 + 1 1.04 60351.5 1.0 8735 4825 13557 HBL1_DMSO_200M_050219_2,13562 HBL1_DMSO_200M_050219_2,13562,ELIKDFQKQDI False False KILEDDKGAFQL 71.790229 688.874987781048 30573745.0 13557.0 ENST00000477822.2_1_6:153294165-153294291:-|nuORF;;ENSG00000112029|ENST00000229758|FBXO5;;nc|ENSG00000112029|Q9UKT4-2|FBXO5 6.233386516571045 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13563 71.798 451.0 700070.0 25 0 218320.0 -1 0 78 1196.1632992758275 3585.468068427684 3 1196.498583972454 MULTI CID FTMS 0 0 0 13557 750738.5 0.6224840624641128 -1 0.0411834716796875 6 4 E 1 -1 6.9897 0.0 0.0 0.19495 0.0 0.0 2929.237528130419 524.1647117828772 3453.4022399132964 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19495 - 356 + 1 1.04 248025.8 1.0 8736 4825 13557 HBL1_DMSO_200M_050219_2,13563 HBL1_DMSO_200M_050219_2,13563, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13564 71.8 70.0 864610.0 25 0 157300.0 + 23784 LVDASGEFTE 10 85 534.2490498935191 1066.483546853838 2 534.2493163943291 MULTI CID FTMS 0 0 0 13557 664745.875 0.8667107739027171 -1 0.0411834716796875 7 Unmodified _LVDASGEFTE_ REV__ENSG00000038427|ENST00000265077|VCAN;REV__ENST00000513016.5_1_5:82832752-82876250:+|nuORF;REV__nc|ENSG00000038427|P13611-2|VCAN;REV__nc|ENSG00000038427|P13611-5|VCAN 19.256988751693697 0.5244284437930726 4 {I|L}VDE 4 -1 52.691 0.0 0.0 4.9406 0.0 0.0 0.0 607.2378634088499 607.2378634088499 23.70333612999225 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}VDE 4.9406 - 217 + 1 1.04 52262.8 1.0 8737 4825 13557 HBL1_DMSO_200M_050219_2,13564 HBL1_DMSO_200M_050219_2,13564,LVDASGEFTE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13565 71.809 524.0 646970.0 25 0 153820.0 + -1 LPYPDPAI 8 129 885.826852931836 3539.278305860944 4 886.0775634646416 MULTI CID FTMS 0 0 0 13557 474933.375 0.89245385483752 -1 0.0411834716796875 8 ENSG00000170606|ENST00000304858|HSPA4 4 C(Carbamidomethyl (C))YYGYCH 7 -1 23.665 0.0 0.0 0.66863 0.0 0.0 1458.505764727296 1131.4087618463502 2589.914526573646 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))YYGYCH 0.66863 - 351 + 1 1.04 265551.6 1.0 8738 4825 13557 HBL1_DMSO_200M_050219_2,13565 HBL1_DMSO_200M_050219_2,13565, False False LPYPDPAI 71.809187 886.077563464642 12533792.0 13557.0 ENSG00000170606|ENST00000304858|HSPA4 3.718116958936056 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13566 71.811 97.0 1001300.0 25 0 92308.0 + 30135 QVLPPLRDV 9 120 518.8111018226462 1035.6076507120922 2 518.8118163943291 MULTI CID FTMS 0 0 0 13557 389364.9375 0.9638809169390126 1 -0.1121444702148437 9 Unmodified _QVLPPLRDV_ ENSG00000111785|ENST00000392837|RIC8B;ENSG00000177963|ENST00000526104|RIC8A;nc|ENSG00000111785|Q9NVN3-1|RIC8B;nc|ENSG00000111785|Q9NVN3-3|RIC8B;nc|ENSG00000111785|Q9NVN3-4|RIC8B;nc|ENSG00000111785|Q9NVN3|RIC8B;nc|ENSG00000177963|Q9NPQ8-2|RIC8A;nc|ENSG00000177963|Q9NPQ8-3|RIC8A;nc|ENSG00000177963|Q9NPQ8-4|RIC8A 39.94969957227396 0.0757326808254658 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PP 5 4 46.823 0.0 0.0 4.5213 0.0 0.0 0.0 498.2686861627563 498.2686861627563 24.19926507712984 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PP 4.5213 + + 580 + 1 1.04 79496.4 1.0 8739 4825 13557 HBL1_DMSO_200M_050219_2,13566 HBL1_DMSO_200M_050219_2,13566,QVLPPLRDV True True QVLPPLRDV 71.8113 518.811816394329 4163722.5 13557.0 nc|ENSG00000111785|Q9NVN3|RIC8B;;ENSG00000111785|ENST00000392837|RIC8B;;nc|ENSG00000177963|Q9NPQ8-3|RIC8A;;nc|ENSG00000111785|Q9NVN3-3|RIC8B;;nc|ENSG00000111785|Q9NVN3-4|RIC8B;;nc|ENSG00000177963|Q9NPQ8-2|RIC8A;;ENSG00000177963|ENST00000526104|RIC8A;;nc|ENSG00000111785|Q9NVN3-1|RIC8B;;nc|ENSG00000177963|Q9NPQ8-4|RIC8A 4.222192764282227 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13567 71.814 145.0 644690.0 25 0 87695.0 11837 GLPVDMDEIE 10 94 559.2590222286663 1116.5034915241324 2 559.2592040896416 MULTI CID FTMS 0 0 0 13557 405420.25 0.5582922535999204 -3 0.3187255859375 10 Unmodified _GLPVDMDEIE_ ENST00000491285.1_1:146215077-146250826:-|nuORF;ENST00000491285.1_1:146215077-146250826:-|nuORF 26.88365393820708 0.3646707531412818 4 {[VA]|[{I|L}G]}PDE{I|L}[EC]E{I|L} 10 5 + 61.891 0.0 0.0 5.5432 5.5432 86.094 0.0 0.0 0.0 43.70297202896872 12.703037561203844 12.703037561203844 12.972287753157516 0 0.3807196863200844 2.0 1.25 0.0 {[VA]|[{I|L}G]}PDE{I|L}[EC]E{I|L};{[VA]|[{I|L}G]}E[DP]{I|L}[EC]E{I|L};{[VA]|[{I|L}G]}E{[YC]|[HE]}[YQ]E{I|L};{[QN]|[E{I|L}]|[KN]}C{M(Oxidation (M))|F}{I|L}[YC(Carbamidomethyl (C))]G{I|L};[W{I|L}]{[YC]|[HE]}[W{M(Oxidation (M))|F}]S{I|L};{[QN]|[E{I|L}]|[KN]}C{M(Oxidation (M))|F}{I|L}[R{M(Oxidation (M))|F}][CS] 5.5432;4.3814;3.7963;0.5862;0.24454;0.070967 -;-;-;-;-;- 228 + 1 1.04 81377.8 1.0 8740 4825 13557 HBL1_DMSO_200M_050219_2,13567 HBL1_DMSO_200M_050219_2,13567,GLPVDMDEIE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13568 71.816 90.0 509220.0 25 0 55778.0 + -1 IMCHSFATL 9 78 548.2506786368198 1094.4868043404394 2 548.2512695193291 MULTI CID FTMS 0 0 0 13557 367752.46875 1.0 0 0.0 11 Carbamidomethyl (C),Oxidation (M) _IM(Oxidation (M))C(Carbamidomethyl (C))HSFATL_ REV__ENST00000370620.5_1_X:135749294-135749660:-|nuORF 23.1484247019978 0.2366544122328345 4 [{I|L}T]C(Carbamidomethyl (C))VKY{I|L} 7 -1 38.689 0.0 0.0 3.5349 0.0 0.0 0.0 213.9941268334857 213.9941268334857 -1.6900678095857558 0.0 -1.6900678095857558 0.0 0 0.0 1.3010299956639813 0.0 0.3494850021680094 [{I|L}T]C(Carbamidomethyl (C))VKY{I|L} 3.5349 - 440 1 1.04 42708.8 1.0 8741 4825 13557 HBL1_DMSO_200M_050219_2,13568 HBL1_DMSO_200M_050219_2,13568,IMCHSFATL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13569 71.819 129.0 615580.0 25 0 69519.0 -1 MFHKLRPV 8 122 522.2951522026177 1042.575751472035 2 522.2966796755791 MULTI CID FTMS 0 0 0 13557 358947.59375 0.2552601989649074 8 -0.9019851684570312 12 Oxidation (M) _M(Oxidation (M))FHKLRPV_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 15.768221252438446 0.6779680726941459 4 V 1 -1 11.783 0.0 0.0 1.1302 0.0 0.0 925.4959765470338 0.0 925.4959765470338 0.0 1.867903314062964 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1302 + + 199 + 1 1.04 65561.7 1.0 8742 4825 13557 HBL1_DMSO_200M_050219_2,13569 HBL1_DMSO_200M_050219_2,13569,MFHKLRPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13570 71.831 615.0 607710.0 25 0 35503.0 -1 0 158 864.909990402458 1727.805427871716 2 864.9110595583916 MULTI CID FTMS 0 0 0 13557 346661.875 0.6941559562220156 -1 0.0411834716796875 13 4 NMPN{I|L}NEAQ 9 -1 113.17 0.0 0.0 6.55 0.0 0.0 0.0 713.3415745749934 713.3415745749934 28.23522823119241 0.0 0.0 0.0 0 1.524227503252014 1.5228787452803376 0.7059771852360797 2.1307196863200843 NMPN{I|L}NEAQ 6.55 - 141817 + 1 1.04 247125.5 1.0 8743 4825 13557 HBL1_DMSO_200M_050219_2,13570 HBL1_DMSO_200M_050219_2,13570, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13571 71.833 131.0 854760.0 25 0 114910.0 + 36300 SYISKVDVL 9 111 512.2899060309588 1022.5652591287176 2 512.2900878787041 MULTI CID FTMS 0 0 0 13557 349301.34375 0.9314801857886484 -1 0.0411834716796875 14 Unmodified _SYISKVDVL_ ENSG00000072121|ENST00000347230|ZFYVE26;ENST00000394455.6_1_14:68196461-68236507:-|nuORF;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;nc|ENSG00000072121|Q68DK2-3|ZFYVE26;nc|ENSG00000072121|Q68DK2-5|ZFYVE26 29.84058131909904 0.1515068451768857 4 [DP]EAV 5 8 30.645 0.0 0.0 2.9969 0.0 0.0 0.0 508.3156571412042 508.3156571412042 0.2912578405666011 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3962566630072955 0.0 [DP]EAV 2.9969 - 868 1 1.04 90311.9 1.0 8744 4825 13557 HBL1_DMSO_200M_050219_2,13571 HBL1_DMSO_200M_050219_2,13571,SYISKVDVL False True SYISKVDVL 71.833481 512.290087878704 3812645.25 13557.0 ENST00000394455.6_1_14:68196461-68236507:-|nuORF;;ENST00000554523.5_1_14:68228796-68282710:-|nuORF;;nc|ENSG00000072121|Q68DK2-2|ZFYVE26;;ENSG00000072121|ENST00000347230|ZFYVE26;;nc|ENSG00000072121|Q68DK2-5|ZFYVE26;;nc|ENSG00000072121|Q68DK2-3|ZFYVE26 5.190390427907308 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13572 71.836 127.0 556160.0 25 0 52674.0 + 37205 TIHVGFDAV 9 104 479.75351072254887 957.4924685118978 2 479.7540466189384 MULTI CID FTMS 0 0 0 13557 342003.6875 1.0 0 0.0 15 Unmodified _TIHVGFDAV_ ENSG00000077264|ENST00000372007|PAK3;ENSG00000149269|ENST00000356341|PAK1;ENSG00000180370|ENST00000327134|PAK2;ENST00000533568.5_1_11:77069900-77103583:-|nuORF;ENST00000556425.2_1_15:21937379-21938108:-|nuORF;nc|ENSG00000077264|O75914-3|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000149269|Q13153-2|PAK1 46.020951573049366 0.0490941689151868 4 {[TV]|[{I|L}S]}[H{I|L}]G{M(Oxidation (M))|F}DAV 9 2 + 46.449 0.0 0.0 4.8511 4.8511 74.303 0.0 0.0 0.0 3.802112417116064 16.478174818886373 3.802112417116064 3.802112417116064 0 0.5752574989159953 2.0 0.2614393726401688 0.0 {[TV]|[{I|L}S]}[H{I|L}]G{M(Oxidation (M))|F}DAV;[HV][{I|L}T]G{M(Oxidation (M))|F}DAV;[KP][QP]G{M(Oxidation (M))|F}DAV;[HV]{[QN]|[E{I|L}]|[KN]}QYAV;[QP][KP]G{M(Oxidation (M))|F}DAV;[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[YR]AV;[HV]{[QN]|[E{I|L}]|[KN]}QHPV;{[CP]|[EA]}[H{I|L}][YR]AV;[{I|L}T]HQT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V;{[QN]|[E{I|L}]|[KN]}[HA][YR]AV 4.8511;4.454;3.0354;2.9003;2.5905;2.2383;1.9584;1.7621;1.5712;1.4477 -;-;-;-;-;-;-;-;-;- 340 1 1.04 60004.1 1.0 8745 4825 13557 HBL1_DMSO_200M_050219_2,13572 HBL1_DMSO_200M_050219_2,13572,TIHVGFDAV True True TIHVGFDAV 71.836085 479.754046618938 3397272.0 13557.0 ENST00000533568.5_1_11:77069900-77103583:-|nuORF;;ENSG00000180370|ENST00000327134|PAK2;;nc|ENSG00000077264|O75914-3|PAK3;;ENSG00000077264|ENST00000372007|PAK3;;nc|ENSG00000077264|O75914-4|PAK3;;nc|ENSG00000149269|Q13153-2|PAK1;;ENST00000556425.2_1_15:21937379-21938108:-|nuORF;;ENSG00000149269|ENST00000356341|PAK1;;nc|ENSG00000077264|O75914|PAK3 5.914906978607178 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13573 71.846 572.0 391700.0 25 0 37635.0 + 31847 RTFDETVSTYV 11 191 659.3200092650832 1316.6254655969665 2 659.3188964724541 MULTI CID FTMS 0 0 0 13557 336814.375 0.9358639783375352 1 -0.1121444702148437 16 Unmodified _RTFDETVSTYV_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 40.72490554402381 0.2012291192650359 4 {[DA]|[EG]}{M(Oxidation (M))|F}VSETVSTVY 12 6 + 75.039 0.0 0.0 5.6993 5.6993 55.506 0.0 0.0 0.0 4.160389131898398 0.0 0.0 0.0 0 0.3807196863200844 0.8538719643217619 2.0356668758921828 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}VSETVSTVY;{[DA]|[EG]}{M(Oxidation (M))|F}VSETVSTYV;[YT][PA]SETVSTVY;[YT][PA]SETVSTYV;[{I|L}V][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]ETVSTYV;[{I|L}V][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]ETVSTVY;{[QN]|[E{I|L}]|[KN]}[YN]ETVSTYV;{[QN]|[E{I|L}]|[KN]}[YN]ETVSTVY;{[MS]|[{M(Oxidation (M))|F}A]}DVSETVSTYV;{[MS]|[{M(Oxidation (M))|F}A]}DVSETVSTVY 5.6993;5.6993;5.3834;5.3834;4.6465;4.6465;4.4298;4.4298;4.3649;4.3649 -;-;-;-;-;-;-;-;-;- 6697 1 1.04 161334.0 1.0 8746 4825 13557 HBL1_DMSO_200M_050219_2,13573 HBL1_DMSO_200M_050219_2,13573,RTFDETVSTYV False True RTFDETVSTYV 71.846118 659.3221 2948194.25 13557.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 7.620738824208577 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13574 71.849 128.0 530210.0 25 0 34308.0 + 2319 AQIKEMVEL 9 112 530.7892083260439 1059.5638637188877 2 530.7897216677666 MULTI CID FTMS 0 0 0 13557 332589.03125 0.0278152872917997 5 -0.62945556640625 17 Unmodified _AQIKEMVEL_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 41.95555342248728 0.0647214845423414 4 {[QN]|[E{I|L}]|[KN]}K[QA]MV 7 6 25.205 0.0 0.0 2.3788 0.0 0.0 0.0 257.1125447093752 257.1125447093752 6.023429469260652 0.0 0.0 0.0 0 0.2396518287104437 0.6777807052660807 0.3054621874040891 0.0 {[QN]|[E{I|L}]|[KN]}K[QA]MV 2.3788 - 467 1 1.04 60756.2 1.0 8747 4825 13557 HBL1_DMSO_200M_050219_2,13574 HBL1_DMSO_200M_050219_2,13574,AQIKEMVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13575 71.861 724.0 292220.0 25 0 49319.0 + 4944 DGLVLVKV 8 162 421.77107342454485 841.5275939158897 2 421.7710143923759 MULTI CID FTMS 0 0 0 13557 299788.75 0.0702108759041775 4 -0.4646759033203125 18 Unmodified _DGLVLVKV_ REV__ENSG00000144840|ENST00000273375|RABL3;REV__ENST00000491398.5_1_3:120457479-120461354:-|nuORF 42.09456458481378 0.1992492688217789 4 [DG]{I|L}V{I|L}VKV 8 -1 [DG]{I|L} + + 38.659 9.9654 3.495 4.5939 4.5939 50.881 0.0 0.0 0.0 0.0 26.44016261540408 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.25 [DG]{I|L}V{I|L}VKV 4.5939 + + 136 + 1 1.04 165740.4 1.0 8748 4825 13557 HBL1_DMSO_200M_050219_2,13575 HBL1_DMSO_200M_050219_2,13575,DGLVLVKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13576 71.873 603.0 195520.0 25 0 13296.0 + 17388 KMIEDLQNEL 10 154 616.8132268869591 1231.611900840718 2 616.8138305544853 MULTI CID FTMS 0 0 0 13557 310021.8125 0.0383345185285205 4 -0.4646759033203125 19 Unmodified _KMIEDLQNEL_ ENSG00000198887|ENST00000361138|SMC5 114.18643581695662 0.001143558078943 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QNE{I|L} 10 0 + 98.015 0.0 0.0 7.9583 7.9583 90.019 0.0 0.0 0.0 8.259876021057067 16.532125137753425 8.259876021057067 8.259876021057067 0 0.819341519366547 0.0 1.3098943791441968 2.0347658448249764 + + {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QNE{I|L};[{I|L}T]{[WT]|[RM]}D{I|L}QNE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}[AG]NE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QGGE{I|L};{NN|[MP]|[D{I|L}]|[EV]}EMK{I|L}QNE{I|L};[{I|L}T]{[WT]|[RM]}D{I|L}[AG]NE{I|L};[{I|L}T]{[WT]|[RM]}D{I|L}QGGE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}[AG]GGE{I|L};{[TV]|[{I|L}S]}T[WE]{I|L}QNE{I|L};[{I|L}T]S[WE]{I|L}QNE{I|L} 7.9583;7.2876;7.2142;7.2142;7.0314;6.5435;6.5435;6.473;6.3015;6.2915 +;-;-;-;-;-;-;-;-;- + 7103 1 1.04 90798.7 1.0 8749 4825 13557 HBL1_DMSO_200M_050219_2,13576 HBL1_DMSO_200M_050219_2,13576,KMIEDLQNEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13577 71.886 744.0 355890.0 25 0 102640.0 -1 0 83 1192.149587314894 3573.426932544882 3 1192.818164050579 MULTI CID FTMS 0 0 0 13557 285341.5 0.9281398024777696 -1 0.0411834716796875 20 4 YG{M(Oxidation (M))|F}C(Carbamidomethyl (C))YYG[YE]G 10 -1 29.641 0.0 0.0 0.82949 0.0 0.0 1178.4312793239822 1132.507619665502 2310.938898989484 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG{M(Oxidation (M))|F}C(Carbamidomethyl (C))YYG[YE]G 0.82949 - 292 + 1 1.04 207910.2 1.0 8750 4825 13557 HBL1_DMSO_200M_050219_2,13577 HBL1_DMSO_200M_050219_2,13577, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13579 71.89 111.0 612680.0 25 0 96306.0 + 22693 LQDSKVIFV 9 111 524.8076022933633 1047.6006516535265 2 524.8077270388603 MULTI CID FTMS 0 0 0 13578 703963.375 1.0 0 0.0 1 Unmodified _LQDSKVIFV_ ENSG00000131196|ENST00000427363|NFATC1;ENST00000591089.1_1_18:77211089-77211992:+|nuORF;nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-17|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1 38.17557092003332 0.0854718145212029 4 [Q{I|L}]{[MG]|[TS]}{I|L}Q{I|L}{M(Oxidation (M))|F}V 9 3 + 52.598 0.0 0.0 5.0208 5.0208 80.585 0.0 0.0 0.0 5.910065365128716 31.78334379460913 5.910065365128716 9.141434418070348 0 1.242992819099939 0.0 1.1989700043360187 0.805462187404089 [Q{I|L}]{[MG]|[TS]}{I|L}Q{I|L}{M(Oxidation (M))|F}V;[KS]VD{I|L}Q{I|L}{M(Oxidation (M))|F}V;[Q{I|L}]{[MG]|[TS]}{I|L}Q{M(Oxidation (M))|F}[{I|L}V];[Q{I|L}]{[MG]|[TS]}{I|L}[AG]{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}[QT]{I|L}Q{I|L}{M(Oxidation (M))|F}V;[{I|L}V]{[CA]|SS}RQ{I|L}{M(Oxidation (M))|F}V;[KS]VD{I|L}Q{M(Oxidation (M))|F}[{I|L}V];[KS]VD{I|L}[AG]{I|L}{M(Oxidation (M))|F}V;[Q{I|L}]{[MG]|[TS]}{I|L}[AG]{M(Oxidation (M))|F}[{I|L}V];{[QS]|[NT]}[{I|L}T]{I|L}Q{I|L}{M(Oxidation (M))|F}V 5.0208;4.1482;4.1434;4.1418;3.4733;3.3029;3.2708;3.2692;3.2645;3.1499 -;-;-;-;-;-;-;-;-;- 830 1 1.04 59785.4 1.0 8751 4826 13578 HBL1_DMSO_200M_050219_2,13579 HBL1_DMSO_200M_050219_2,13579,LQDSKVIFV True True LQDSKVIFV 71.890276 524.80772703886 8314996.0 13578.0 nc|ENSG00000131196|O95644-6|NFATC1;;nc|ENSG00000131196|O95644-10|NFATC1;;nc|ENSG00000131196|O95644-5|NFATC1;;ENSG00000131196|ENST00000427363|NFATC1;;nc|ENSG00000131196|O95644-11|NFATC1;;nc|ENSG00000131196|O95644-8|NFATC1;;nc|ENSG00000131196|O95644-2|NFATC1;;ENST00000591089.1_1_18:77211089-77211992:+|nuORF;;nc|ENSG00000131196|O95644-4|NFATC1;;nc|ENSG00000131196|O95644-17|NFATC1;;nc|ENSG00000131196|O95644-3|NFATC1 5.83462127049764 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13580 71.893 125.0 607920.0 25 0 58704.0 + 28928 QARLQVVHR 9 109 553.8302735297617 1105.645994126323 2 553.8314697146416 MULTI CID FTMS 0 0 0 13578 241194.84375 0.2115200367887862 11 -1.189208984375 2 Unmodified _QARLQVVHR_ REV__ENSG00000160712|ENST00000368485|IL6R;REV__nc|ENSG00000160712|P08887-2|IL6R 4.3292370932331545 0.7635526921153418 4 {I|L} 1 -1 10.969 0.0 0.0 0.9921 0.0 0.0 974.5505179073764 0.0 974.5505179073764 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.9921 + + 104 + 1 1.04 61850.9 1.0 8752 4826 13578 HBL1_DMSO_200M_050219_2,13580 HBL1_DMSO_200M_050219_2,13580,QARLQVVHR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13581 71.894 46.0 1664400.0 25 0 150300.0 + 10166 FPYIQKGL 8 93 483.2765503290493 964.5385477248986 2 483.2768432497978 MULTI CID FTMS 0 0 0 13578 780474.8125 0.245504110046011 -2 0.1533279418945312 3 Unmodified _FPYIQKGL_ ENSG00000119285|ENST00000366582|HEATR1 46.92087301778293 0.1537303740847981 4 {M(Oxidation (M))|F}PY{I|L}QKAV 8 2 + 49.666 0.0 0.0 5.1492 5.1492 75.498 0.0 0.0 0.0 8.062156855793674 3.756636139608851 3.756636139608851 3.756636139608851 0 0.3054621874040891 0.0 0.0 0.3807196863200844 {M(Oxidation (M))|F}PY{I|L}QKAV;{M(Oxidation (M))|F}PY{I|L}QKG{I|L};[{I|L}P]{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}PE;{M(Oxidation (M))|F}PY{I|L}[AG]KAV;{M(Oxidation (M))|F}PY{I|L}[AG]KG{I|L} 5.1492;4.7597;4.3134;4.1889;3.7995 -;+;-;-;- + 298 + 1 1.04 66708.1 1.0 8753 4826 13578 HBL1_DMSO_200M_050219_2,13581 HBL1_DMSO_200M_050219_2,13581,FPYIQKGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13582 71.896 81.0 1063100.0 25 0 77405.0 + 21682 LPTGKQFLV 9 106 501.80332953651566 1001.5921061398312 2 501.8030883669853 MULTI CID FTMS 0 0 0 13578 570696.0625 0.2900608861416128 -1 0.1121444702148437 4 Unmodified _LPLPGFVFL_ ENSG00000144848|ENST00000283290|ATG3;ENST00000465980.1_1_3:112262891-112280447:-|nuORF;nc|ENSG00000144848|Q9NT62-2|ATG3;ENST00000495756.5_1_3:112255248-112280627:-|nuORF 20.871210003555333 0.2717241269066626 4 {I|L}PT 3 7 41.159 0.0 0.0 4.1093 0.0 0.0 0.0 687.3859632415499 687.3859632415499 27.203262390990925 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {I|L}PT 4.1093 - 672 + 1 1.04 68278.7 1.0 8754 4826 13578 HBL1_DMSO_200M_050219_2,13582 HBL1_DMSO_200M_050219_2,13582,LPLPGFVFL False False LPTGKQFLV 71.895943 501.803088366985 14669428.0 13578.0 ENSG00000144848|ENST00000283290|ATG3;;ENST00000465980.1_1_3:112262891-112280447:-|nuORF;;nc|ENSG00000144848|Q9NT62-2|ATG3;;ENST00000495756.5_1_3:112255248-112280627:-|nuORF 4.342426776885986 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13583 71.905 526.0 413100.0 25 0 104660.0 -1 0 76 1178.1454051815028 3531.4143861447087 3 1178.481127917767 MULTI CID FTMS 0 0 0 13578 530528.25 1.0 0 0.0 5 4 YG 2 -1 10.969 0.0 0.0 0.31061 0.0 0.0 1826.6816943401543 1481.6501468438942 3308.331841184048 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.31061 - 73 + 1 1.04 172242.0 1.0 8755 4826 13578 HBL1_DMSO_200M_050219_2,13583 HBL1_DMSO_200M_050219_2,13583, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13584 71.914 505.0 328180.0 25 0 56717.0 38512 TSLLRTSLSIS 11 159 589.3429844827069 1176.6714160322138 2 589.3434326052666 MULTI CID FTMS 0 0 0 13578 400304.28125 0.3791876975605505 -6 0.6219406127929688 6 Unmodified _TSLLRTSLSIS_ nc|ENSG00000100150|O75140-5|DEPDC5 5.296884461304476 0.8501568894076437 4 {I|L} 1 10 10.837 0.0 0.0 0.92103 0.0 0.0 1045.5758482605324 0.0 1045.5758482605324 0.0 1.6887640134436044 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.92103 + + 172 + 1 1.04 127579.7 1.0 8756 4826 13578 HBL1_DMSO_200M_050219_2,13584 HBL1_DMSO_200M_050219_2,13584,TSLLRTSLSIS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13585 71.924 565.0 386250.0 25 0 30654.0 + -1 YPLIQCLPVEL 11 175 672.8667232009165 1343.7188934686328 2 672.8674194216728 MULTI CID FTMS 0 0 0 13578 337911.3125 1.0 0 0.0 7 Carbamidomethyl (C) _YPLIQC(Carbamidomethyl (C))LPVEL_ REV__ENSG00000158220|ENST00000389567|ESYT3;REV__ENST00000486831.5_1_3:138189538-138191915:+|nuORF 17.11289562659939 0.6791789249425932 4 {I|L}EVK{I|L}DD{I|L}QSM 11 -1 38.585 0.0 0.0 2.8715 0.0 0.0 54.04021769727644 0.0 54.04021769727644 0.0 -3.240986540653765 -3.240986540653765 0.0 0 0.1747425010840047 0.0 0.6307196863200843 0.5228787452803376 {I|L}EVK{I|L}DD{I|L}QSM 2.8715 - 11538 + 1 1.04 161286.7 1.0 8757 4826 13578 HBL1_DMSO_200M_050219_2,13585 HBL1_DMSO_200M_050219_2,13585,YPLIQCLPVEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13586 71.934 566.0 537030.0 25 0 68986.0 + 38341 TQLPESTSLRL 11 167 622.8457247753252 1243.6768966174502 2 622.8458740115166 MULTI CID FTMS 0 0 0 13578 326927.84375 0.3855356476228346 -1 0.1121444702148437 8 Unmodified _TQLPESTSLRL_ ENSG00000159593|ENST00000290810|NAE1;ENST00000567743.5_1_16:66851261-66857485:-|nuORF;nc|ENSG00000159593|Q13564-2|NAE1;nc|ENSG00000159593|Q13564-3|NAE1;nc|ENSG00000159593|Q13564-4|NAE1 64.9267550582149 0.0491502274424461 4 [{I|L}T]QPES{I|L}TKD{I|L} 11 6 + 73.829 0.0 0.0 5.9364 5.9364 75.04 0.0 0.0 0.0 5.880456295278407 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 1.1861818737241734 1.6989700043360187 0.9604093769761876 0.3494850021680094 [{I|L}T]QPES{I|L}TKD{I|L};[{I|L}T]QPES{I|L}TKEV;[{I|L}T]QPESTRVT{I|L};[{I|L}T]QPEST{I|L}KD{I|L};[{I|L}T]QPEST{I|L}KEV;[QT]{I|L}PES{I|L}TKD{I|L};[{I|L}T]Q{I|L}[PS]VY{I|L}[NP];[{I|L}T]QPES{I|L}TAAT{I|L};[QT]{I|L}PES{I|L}TKEV;[QT]{I|L}PESTRVT{I|L} 5.9364;5.7948;5.7564;5.741;5.5994;5.4635;5.4013;5.4009;5.322;5.2836 -;-;-;-;-;-;-;-;-;- 10341 + 1 1.04 221087.7 1.0 8758 4826 13578 HBL1_DMSO_200M_050219_2,13586 HBL1_DMSO_200M_050219_2,13586,TQLPESTSLRL True True TQLPESTSLRL 71.934024 622.845874011517 6621805.5 13578.0 nc|ENSG00000159593|Q13564-4|NAE1;;ENST00000567743.5_1_16:66851261-66857485:-|nuORF;;nc|ENSG00000159593|Q13564-3|NAE1;;nc|ENSG00000159593|Q13564-2|NAE1;;ENSG00000159593|ENST00000290810|NAE1 5.658636887868245 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13587 71.937 158.0 311280.0 25 0 23722.0 + 8696 EVKNFFIFSTL 11 94 448.9134421893118 1343.7184971681354 3 448.9132263064384 MULTI CID FTMS 0 0 0 13578 316579.625 0.6535865671161288 5 -0.5869064331054688 9 Unmodified _EVKNFFIFSTL_ REV__ENSG00000275052|ENST00000616407|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B;REV__nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B 7.0370850670814 0.8419465095438622 4 {[VA]|[{I|L}G]}A{M(Oxidation (M))|F}{I|L}P 6 -1 22.396 0.0 0.0 1.6667 0.0 0.0 0.0 742.3832059906541 742.3832059906541 -0.0308343376843147 0.0 -0.0308343376843147 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}A{M(Oxidation (M))|F}{I|L}P 1.6667 - 507 1 1.04 47509.6 1.0 8759 4826 13578 HBL1_DMSO_200M_050219_2,13587 HBL1_DMSO_200M_050219_2,13587,EVKNFFIFSTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13588 71.947 584.0 295800.0 25 0 10170.0 + -1 FSTACKNCSL 10 201 594.264791662238 1186.515030391276 2 594.2652465701103 MULTI CID FTMS 0 0 0 13578 298312.78125 0.4580585112814916 -1 0.1121444702148437 10 2 Carbamidomethyl (C) _FSTAC(Carbamidomethyl (C))KNC(Carbamidomethyl (C))SL_ REV__ENSG00000165861|ENST00000556143|ZFYVE1;REV__nc|ENSG00000165861|Q9HBF4-2|ZFYVE1;REV__nc|ENSG00000165861|Q9HBF4-3|ZFYVE1 19.256988751693697 0.5244284437930726 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPV{M(Oxidation (M))|F}CN{M(Oxidation (M))|F}AV 11 -1 + 47.25 0.0 0.0 3.9823 3.9823 66.316 0.0 0.0 0.0 1.2930354201075147 6.096307572822447 1.2930354201075147 1.2930354201075147 0 0.4291746928241126 1.5228787452803376 0.0 0.2614393726401688 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPV{M(Oxidation (M))|F}CN{M(Oxidation (M))|F}AV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QV{M(Oxidation (M))|F}CN{M(Oxidation (M))|F}AV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GP{M(Oxidation (M))|F}VCN{M(Oxidation (M))|F}AV;[VP]YQ{M(Oxidation (M))|F}CN{M(Oxidation (M))|F}AV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{M(Oxidation (M))|F}VCN{M(Oxidation (M))|F}AV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VQ{M(Oxidation (M))|F}CN{M(Oxidation (M))|F}AV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QV{M(Oxidation (M))|F}CGG{M(Oxidation (M))|F}AV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]V{M(Oxidation (M))|F}CN{M(Oxidation (M))|F}AV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GPV{M(Oxidation (M))|F}CGG{M(Oxidation (M))|F}AV;[VP]Y[AG]{M(Oxidation (M))|F}CN{M(Oxidation (M))|F}AV 3.9823;3.8733;3.7286;3.7249;3.6196;3.4712;3.1009;3.1009;2.9926;2.9525 -;-;-;-;-;-;-;-;-;- 1787 1 1.04 134485.6 1.0 8760 4826 13578 HBL1_DMSO_200M_050219_2,13588 HBL1_DMSO_200M_050219_2,13588,FSTACKNCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13589 71.959 613.0 229170.0 25 0 23663.0 + 19674 LGLLALPDTFL 11 147 586.8478323627918 1171.6811117923835 2 586.8478881716728 MULTI CID FTMS 0 0 0 13578 269083.5625 1.0 0 0.0 11 Unmodified _LGLLALPDTFL_ REV__ENSG00000213445|ENST00000534313|SIPA1 43.85829265575387 0.1529608345840953 4 {I|L}G{I|L}DDKTG{I|L}K{I|L} 11 -1 + 90.888 0.0 0.0 7.757 7.757 96.617 0.0 0.0 0.0 35.247662686420554 11.1798669615398 11.1798669615398 52.04806094493544 0 1.7346368802282015 1.6989700043360187 0.8494850021680094 0.2887254899964357 {I|L}G{I|L}DDKTG{I|L}K{I|L};{I|L}{[RE]|[WV]}DKTG{I|L}K{I|L};{[VA]|[{I|L}G]}[KT]DK[{M(Oxidation (M))|F}V][HK];{[TV]|[{I|L}S]}[KA]DK[{M(Oxidation (M))|F}V][HK];[{I|L}T][KG]DK[{M(Oxidation (M))|F}V][HK];[K{I|L}]{[SA]|[TG]}DK[{M(Oxidation (M))|F}V][HK] 7.757;3.3149;2.8768;1.4543;1.1263;0.59282 -;-;-;-;-;- 1687 + 1 1.04 107639.8 1.0 8761 4826 13578 HBL1_DMSO_200M_050219_2,13589 HBL1_DMSO_200M_050219_2,13589,LGLLALPDTFL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13590 71.961 101.0 679760.0 25 0 64393.0 + -1 AQHENVPFI 9 113 526.7707054986234 1051.5268580640468 2 527.7720214724541 MULTI CID FTMS 0 0 0 13578 257626.75 0.3362749715306256 -3 0.3372802734375 12 Oxidation (M) _PFWM(Oxidation (M))VLML_ ENSG00000105808|ENST00000262940|RASA4;nc|ENSG00000105808|O43374-2|RASA4;ENST00000523568.1_7:102228019-102246337:-|nuORF;ENSG00000170667|ENST00000465829|RASA4B 17.086550045450526 0.6584923310065985 4 P{M(Oxidation (M))|F}{I|L} 3 -1 20.903 0.0 0.0 1.9879 0.0 0.0 676.3101049896312 0.0 676.3101049896312 0.0 5.469837217489513 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{M(Oxidation (M))|F}{I|L} 1.9879 - 205 + 1 1.04 58394.3 1.0 8762 4826 13578 HBL1_DMSO_200M_050219_2,13590 HBL1_DMSO_200M_050219_2,13590,PFWMVLML False False AQHENVPFI 71.961445 527.772021472454 9341539.0 13578.0 ENSG00000105808|ENST00000262940|RASA4;;nc|ENSG00000105808|O43374-2|RASA4;;ENST00000523568.1_7:102228019-102246337:-|nuORF;;ENSG00000170667|ENST00000465829|RASA4B 5.202267646789551 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13591 71.973 680.0 290280.0 25 0 24157.0 17741 KPYNVYITV 9 200 548.8055534897369 1095.5965540462737 2 548.8047973513603 MULTI CID FTMS 0 0 0 13578 223835.8125 0.6063397981679475 2 -0.2338943481445312 13 Unmodified _KPYNVYITV_ ENSG00000119537|ENST00000645214|KDSR;ENST00000585750.1_1_18:61011618-61022465:-|nuORF;ENST00000586791.5_1_18:60999017-61011732:-|nuORF;nc|ENSG00000119537|Q06136-2|KDSR 52.268347100219714 0.0353964759249114 4 [{I|L}T]C(Carbamidomethyl (C))VKY{I|L}TV 9 5 + 66.198 0.0 0.0 6.0422 6.0422 72.994 0.0 0.0 0.0 0.5009747629894576 14.09256854528806 0.5009747629894576 0.5009747629894576 0 0.5 0.958607314841775 0.5796896906561032 0.91944517631652 [{I|L}T]C(Carbamidomethyl (C))VKY{I|L}TV;[Y{I|L}]GGV{M(Oxidation (M))|F}K{I|L}TV;[{M(Oxidation (M))|F}V]SGV{M(Oxidation (M))|F}K{I|L}TV;[{I|L}T]C(Carbamidomethyl (C))VYK{I|L}TV;[YV]NPKY{I|L}TV;[Y{I|L}]NV{M(Oxidation (M))|F}K{I|L}TV;[VG]A{M(Oxidation (M))|F}VKY{I|L}TV;[{I|L}T][CG]VKY{I|L}TV;{[VA]|[{I|L}G]}G{M(Oxidation (M))|F}VKY{I|L}TV;[Y{I|L}]G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{I|L}TV 6.0422;5.9965;5.6867;5.618;5.5172;5.4003;5.2196;5.2017;5.1416;5.0982 -;-;-;-;-;-;-;-;-;- 9496 1 1.04 153434.1 1.0 8763 4826 13578 HBL1_DMSO_200M_050219_2,13591 HBL1_DMSO_200M_050219_2,13591,KPYNVYITV True True GLYIGNFKDA 71.97328 548.80479735136 1274491.625 13578.0 ENSG00000112679|ENST00000419235|DUSP22;;nc|ENSG00000112679|Q9NRW4|DUSP22 0.8143425478289524 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13592 71.987 800.0 43536.0 25 0 8149.0 -1 0 40 1158.124343637297 3471.3512015120914 3 1158.790576159954 MULTI CID FTMS 0 0 0 13578 166507.46875 1.0 0 0.0 14 4 Y 1 -1 5.4846 0.0 0.0 0.15799 0.0 0.0 2559.9703554200973 745.2889498346311 3305.2593052547286 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.15799 - 5 + 1 1.04 34273.6 1.0 8764 4826 13578 HBL1_DMSO_200M_050219_2,13592 HBL1_DMSO_200M_050219_2,13592, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13593 72.002 800.0 86882.0 25 0 19757.0 -1 0 47 1114.776293933392 0 1114.776293933392 PEAK CID FTMS 0 0 0 -1 0 15 4 E 1 -1 5.4846 0.0 0.0 0.24622 0.0 0.0 1571.3069710066345 524.1659639947874 2095.472935001422 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.24622 - 6 + 1 1.04 62730.3 0.9700000286102296 8765 4826 13578 HBL1_DMSO_200M_050219_2,13593 HBL1_DMSO_200M_050219_2,13593, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13594 72.016 800.0 318350.0 25 0 19264.0 + 34980 SQLPVAPQL 9 223 476.7778193404465 951.541085747693 2 476.7775756716728 MULTI CID FTMS 0 0 0 13578 164571.640625 1.0 0 0.0 16 Unmodified _SQLPVAPQL_ ENSG00000215012|ENST00000328554|RTL10 49.55428908609986 0.0413471690215031 4 [VP]ASQ{I|L} 6 4 30.332 0.0 0.0 3.1877 0.0 0.0 0.0 353.1837248694051 353.1837248694051 5.474673466932512 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.6694451763165201 0.3054621874040891 [VP]ASQ{I|L} 3.1877 - 2164 1 1.04 191256.3 0.9399999976158142 8766 4826 13578 HBL1_DMSO_200M_050219_2,13594 HBL1_DMSO_200M_050219_2,13594,SQLPVAPQL True True SQLPVAPQL 72.016013 476.777575671673 1604841.5 13578.0 ENSG00000215012|ENST00000328554|RTL10 5.554783344268799 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13595 72.03 800.0 195790.0 25 0 20843.0 + 11119 GEGLGKII 8 166 393.74000144806354 0 393.7403442263603 PEAK CID FTMS 0 0 0 13578 155033.265625 1.0 0 0.0 17 Unmodified _GEGLGKII_ ENSG00000133812|ENST00000256190|SBF2;nc|ENSG00000133812|Q86WG5-3|SBF2 30.22481116460888 0.2280668331718824 4 G{I|L} 2 6 15.005 0.0 0.0 1.9103 0.0 0.0 186.06282781322085 426.2746528638045 612.3374806770254 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + G{I|L} 1.9103 + + 110 + 1 1.04 124876.3 0.7900000214576721 8767 4826 13578 HBL1_DMSO_200M_050219_2,13595 HBL1_DMSO_200M_050219_2,13595,GEGLGKII False True GEGLGKII 72.029828 393.74034422636 998072.75 13578.0 nc|ENSG00000133812|Q86WG5-3|SBF2;;ENSG00000133812|ENST00000256190|SBF2 0.9983123491207758 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13596 72.045 800.0 95038.0 25 0 7293.6 -1 EELCLRFMKEV 11 133 735.357035519538 1468.699518105876 2 735.3591796755791 MULTI CID FTMS 0 0 0 13578 137529.90625 0.4011735237836876 2 -0.2338943481445312 18 Carbamidomethyl (C),Oxidation (M) _EELC(Carbamidomethyl (C))LRFM(Oxidation (M))KEV_ ENST00000429784.2_1_1:46908577-46910999:+|nuORF 8.155526934196011 0.8366696279279818 4 {M(Oxidation (M))|F}YW 3 -1 26.198 0.0 0.0 1.7837 0.0 0.0 954.4575021285232 0.0 954.4575021285232 0.0 9.47621246364342 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}YW 1.7837 - 688 1 1.04 57686.5 0.9900000095367432 8768 4826 13578 HBL1_DMSO_200M_050219_2,13596 HBL1_DMSO_200M_050219_2,13596,EELCLRFMKEV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13597 72.059 800.0 67657.0 25 0 7767.4 -1 0 48 1149.4475966956838 0 1149.444628894329 PEAK CID FTMS 0 0 0 13578 129855.6875 1.0 0 0.0 19 4 YSVG 4 -1 12.423 0.0 0.0 0.54085 0.0 0.0 1166.3990253232053 721.2861949022073 1887.6852202254129 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YSVG 0.54085 - 90 + 1 1.04 46025.7 0.9399999976158142 8769 4826 13578 HBL1_DMSO_200M_050219_2,13597 HBL1_DMSO_200M_050219_2,13597, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13598 72.071 735.0 304390.0 25 0 26806.0 32954 SELPAPRRLR 10 182 597.8561447370602 1193.6977365409202 2 597.8528930544853 MULTI CID FTMS 0 0 0 13578 135670.796875 0.3213695061403789 -4 0.4308700561523437 20 Unmodified _SELPAPRRLR_ ENSG00000070748|ENST00000337653|CHAT;nc|ENSG00000070748|P28329-2|CHAT;nc|ENSG00000070748|P28329-3|CHAT 3.2813086475875832 0.7114585191678878 4 [DP]E 3 9 19.888 0.0 0.0 1.6661 0.0 0.0 0.0 849.551049041088 849.551049041088 10.205450781240105 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.2396518287104437 0.0 [DP]E 1.6661 - 390 1 1.04 164660.5 1.0 8770 4826 13578 HBL1_DMSO_200M_050219_2,13598 HBL1_DMSO_200M_050219_2,13598,SELPAPRRLR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13600 72.076 1.7 53728000.0 25 0 15013000.0 -1 0 34 1162.7987859000227 3485.374528300268 3 1163.467211902142 MULTI CID FTMS 0 0 0 13599 85995896.0 0.6321297048571989 1 -0.0484161376953125 1 4 G{M(Oxidation (M))|F} 2 -1 9.464 0.0 0.0 0.27153 0.0 0.0 1942.695647540306 1335.589626150458 3278.2852736907644 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 0.27153 - 25 + 1 1.034 84962.0 1.0 8771 4827 13599 HBL1_DMSO_200M_050219_2,13600 HBL1_DMSO_200M_050219_2,13600, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13601 72.077 1.6 29826000.0 25 0 4156900.0 + 3099 AVPDEIPPLE 10 71 540.2849079987573 1078.5552630643144 2 540.2854492068291 MULTI CID FTMS 0 0 0 13599 30054348.0 1.0 0 0.0 2 Unmodified _AVPDEIPPLE_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 15.738622578938676 0.5834632108994704 4 [DP]E{I|L}AV 6 6 30.45 0.0 0.0 2.8233 0.0 0.0 0.0 451.2209934848077 451.2209934848077 0.8868910397398295 0.0 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 [DP]E{I|L}AV 2.8233 - 123 1 1.034 41919.1 1.0 8772 4827 13599 HBL1_DMSO_200M_050219_2,13601 HBL1_DMSO_200M_050219_2,13601,AVPDEIPPLE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13602 72.078 3.6 16352000.0 25 0 3457000.0 + 18343 KVLEYVIKV 9 80 545.8471048635333 1089.6796567938666 2 545.8472778201103 MULTI CID FTMS 0 0 0 13599 14245400.0 1.0 0 0.0 3 Unmodified _KVLEYVIKV_ ENSG00000198681|ENST00000356661|MAGEA1 61.08992128646608 0.0254786290039527 4 KV{I|L}EYV{I|L}KV 9 0 + 69.135 0.0 0.0 6.3446 6.3446 74.489 0.0 0.0 0.0 1.989700043360188 0.6214790674884512 0.6214790674884512 0.6214790674884512 0 3.048455006504028 0.0 1.0 0.25 + + KV{I|L}EYV{I|L}KV;KV{I|L}EYV{I|L}VK;VK{I|L}EYV{I|L}KV;VK{I|L}EYV{I|L}VK 6.3446;6.2875;6.162;6.1049 +;-;-;- + 369 + 1 1.034 50328.9 1.0 8773 4827 13599 HBL1_DMSO_200M_050219_2,13602 HBL1_DMSO_200M_050219_2,13602,KVLEYVIKV True True KVLEYVIKV 72.078046 545.84727782011 368903953.0 13599.0 ENSG00000198681|ENST00000356661|MAGEA1 6.25035572052002 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13603 72.079 13.0 2638300.0 25 0 186920.0 + 3995 DALRPPLQNI 10 68 568.8248093279032 1135.6350657226062 2 568.8247558474541 MULTI CID FTMS 0 0 0 13599 3133740.0 0.6340572214314959 1 -0.0484161376953125 4 Unmodified _DALRPPLQNI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 49.55428908609986 0.0827668555218455 4 {[DA]|[EG]}{I|L}R{I|L}{[HG]|PP}QN{I|L} 10 2 {[DA]|[EG]}{I|L} + + 46.145 19.041 6.3651 4.0634 4.0634 48.877 0.0 0.0 0.0 0.0 27.104192878355736 0.0 0.0 0 1.5 0.0 0.0 1.6989700043360187 {[DA]|[EG]}{I|L}R{I|L}{[HG]|PP}QN{I|L} 4.0634 - 224 + 1 1.034 32403.0 1.0 8774 4827 13599 HBL1_DMSO_200M_050219_2,13603 HBL1_DMSO_200M_050219_2,13603,DALRPPLQNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13604 72.08 16.0 2983100.0 25 0 396660.0 + 13835 HTVGELIEV 9 74 498.7721842658555 995.529815598511 2 498.7718383669853 MULTI CID FTMS 0 0 0 13599 2519561.0 0.802396781891972 1 -0.0484161376953125 5 Unmodified _HTVGELIEV_ ENSG00000002822|ENST00000265854|MAD1L1;ENST00000496548.1_1_7:1855708-1869233:-|nuORF;nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1 48.345845343767074 0.0439967357579942 4 {NN|[MP]|[D{I|L}]|[EV]}A[HS]{I|L}{I|L}EV 9 5 + 47.526 0.0 0.0 4.774 4.774 66.944 0.0 0.0 0.0 0.113168458567685 0.113168458567685 0.113168458567685 0.113168458567685 0 1.079689690656103 0.0 1.5356668758921828 0.0 {NN|[MP]|[D{I|L}]|[EV]}A[HS]{I|L}{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}{I|L}[YN]EV;{[QN]|[E{I|L}]|[KN]}G[HS]{I|L}{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}[YN]{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}[YN]E{I|L}V;[VP][RH]{M(Oxidation (M))|F}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[YN]{I|L}{I|L}[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}A[YR]{I|L}[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}G[YR]{I|L}[{M(Oxidation (M))|F}V] 4.774;4.7626;3.8624;3.6511;2.9645;2.1572;1.1982;1.1982;0.28662 -;-;-;-;-;-;-;-;- 110 1 1.034 41477.9 1.0 8775 4827 13599 HBL1_DMSO_200M_050219_2,13604 HBL1_DMSO_200M_050219_2,13604,HTVGELIEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13605 72.084 167.0 1727900.0 25 0 300550.0 -1 0 122 1170.4490311984523 3508.325264195558 3 1171.118823230267 MULTI CID FTMS 0 0 0 13599 2306451.5 0.6872494738251966 1 -0.0484161376953125 6 4 {M(Oxidation (M))|F}YGC(Carbamidomethyl (C))[Y{M(Oxidation (M))|F}]C(Carbamidomethyl (C))G{[YC]|[HE]}T 11 -1 17.91 0.0 0.0 0.51051 0.0 0.0 945.3054410527828 1138.4518526666627 2083.757293719445 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {M(Oxidation (M))|F}YGC(Carbamidomethyl (C))[Y{M(Oxidation (M))|F}]C(Carbamidomethyl (C))G{[YC]|[HE]}T 0.51051 - 1845 + 1 1.034 212262.2 1.0 8776 4827 13599 HBL1_DMSO_200M_050219_2,13605 HBL1_DMSO_200M_050219_2,13605, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13606 72.085 18.0 2264200.0 25 0 240450.0 + 28943 QAYEALTQI 9 82 518.769831566843 1035.525110200486 2 518.7695800662041 MULTI CID FTMS 0 0 0 13599 2091052.25 0.5327689970332821 -2 0.2976226806640625 7 Unmodified _QAYEALTQI_ ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160 78.14939416004806 0.0179651292570206 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EQA[VP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 9 5 + 36.426 0.0 0.0 3.5176 3.5176 71.794 0.0 0.0 0.0 2.041071417286531 12.023724659318988 2.041071417286531 5.541134294324131 0 0.0 1.0 1.110924374808178 0.7302046884880937 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EQA[VP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EAGA[VP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EAQ[VP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QEA[VP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[AG]{I|L}[EC]A{I|L}T{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[VA]|[{I|L}G]}A[EC]A{I|L}T{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}CQA{I|L}T{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}AC(Carbamidomethyl (C))A{I|L}T{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[Q{I|L}][EC]A{I|L}T{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[AG]T[W{M(Oxidation (M))|F}][VP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 3.5176;2.9825;2.9541;2.9362;2.7484;2.5137;2.2511;2.0811;1.7732;1.5934 -;-;-;-;-;-;-;-;-;- 360 1 1.034 36527.9 1.0 8777 4827 13599 HBL1_DMSO_200M_050219_2,13606 HBL1_DMSO_200M_050219_2,13606,QAYEALTQI True True QAYEALTQI 72.084896 518.769580066204 62048824.0 13599.0 nc|ENSG00000030066|Q12769|NUP160;;ENSG00000030066|ENST00000378460|NUP160 5.632383982340495 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13607 72.086 15.0 2106000.0 25 0 198750.0 11825 GLPDLTFMHA 10 50 551.275357734048 1100.536162534896 2 551.2751953005791 MULTI CID FTMS 0 0 0 13599 1480251.75 0.8655237702644478 -1 0.1854782104492187 8 Unmodified _GLPDLTFMHA_ ENSG00000119844|ENST00000409933|AFTPH;ENST00000498706.5_1_2:64808202-64819166:+|nuORF;nc|ENSG00000119844|Q6ULP2-6|AFTPH;nc|ENSG00000119844|Q6ULP2-8|AFTPH;nc|ENSG00000119844|Q6ULP2-9|AFTPH 10.073929032068715 0.6785112666868882 4 {[VA]|[{I|L}G]}PDE{I|L} 6 6 50.718 0.0 0.0 4.6085 0.0 0.0 0.0 473.20115076236567 473.20115076236567 26.281446971601312 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[VA]|[{I|L}G]}PDE{I|L} 4.6085 - 38 + 1 1.034 32332.7 1.0 8778 4827 13599 HBL1_DMSO_200M_050219_2,13607 HBL1_DMSO_200M_050219_2,13607,GLPDLTFMHA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13608 72.087 37.0 1721500.0 25 0 246210.0 + 27426 PIPVIGLR 8 64 432.7870939984427 863.5596350636854 2 432.7870056033134 MULTI CID FTMS 0 0 0 13599 1375214.5 0.8945720225907627 -1 0.1854782104492187 9 Unmodified _PIPVIGLR_ ENSG00000147246|ENST00000276198|HTR2C 18.13498045792455 0.6430038125133779 4 {I|L}PPV{I|L} 5 5 58.711 0.0 0.0 6.7988 0.0 0.0 0.0 341.19626794986567 341.19626794986567 51.72167511924052 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPV{I|L} 6.7988 - 24 + 1 1.034 56363.1 1.0 8779 4827 13599 HBL1_DMSO_200M_050219_2,13608 HBL1_DMSO_200M_050219_2,13608,PIPVIGLR False True PIPVIGLR 72.087254 432.787005603313 18189054.0 13599.0 ENSG00000147246|ENST00000276198|HTR2C 1.6092724998792012 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13609 72.089 62.0 1185800.0 25 0 135200.0 -1 0 64 878.5877281921317 3510.321806902127 4 878.8395263552666 MULTI CID FTMS 0 0 0 13599 1174563.875 0.6857163477972013 1 -0.0484161376953125 10 4 VY{I|L}V 4 -1 13.532 0.0 0.0 0.38549 0.0 0.0 2667.8705262398207 365.14716516666255 3033.017691406483 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VY{I|L}V 0.38549 - 78 + 1 1.034 66023.4 1.0 8780 4827 13599 HBL1_DMSO_200M_050219_2,13609 HBL1_DMSO_200M_050219_2,13609, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13610 72.095 318.0 428100.0 25 0 113500.0 -1 0 68 1180.7630081612006 3539.267195083802 3 1181.431933581829 MULTI CID FTMS 0 0 0 13599 989079.6875 0.94174656347327 1 -0.0484161376953125 11 4 {M(Oxidation (M))|F}Y 2 -1 7.9588 0.0 0.0 0.22487 0.0 0.0 2000.687069206652 1225.439291565973 3226.126360772625 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.22487 - 24 + 1 1.034 113550.8 1.0 8781 4827 13599 HBL1_DMSO_200M_050219_2,13610 HBL1_DMSO_200M_050219_2,13610, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13611 72.1 321.0 527280.0 25 0 92114.0 -1 0 73 1175.7746942171984 3524.302253251796 3 1176.443896472454 MULTI CID FTMS 0 0 0 13599 978141.0625 0.8532972718925769 1 -0.0484161376953125 12 4 YG 2 -1 9.464 0.0 0.0 0.26853 0.0 0.0 1781.612688648822 1519.5934217446809 3301.206110393503 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.26853 - 92 + 1 1.034 132707.3 1.0 8782 4827 13599 HBL1_DMSO_200M_050219_2,13611 HBL1_DMSO_200M_050219_2,13611, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13612 72.102 32.0 1047100.0 25 0 86613.0 + 23822 LVFHTRPN 8 64 492.27452508588567 982.5344972385714 2 492.2744628787041 MULTI CID FTMS 0 0 0 13599 950356.6875 0.2180067183951551 3 -0.3318328857421875 13 Unmodified _LVFHTRPN_ REV__nc|ENSG00000117153|Q53G59-2|KLHL12 10.183394434864962 0.7604730176254005 4 [DP]VVNE 6 -1 23.505 0.0 0.0 2.3923 0.0 0.0 0.0 326.2081782290589 326.2081782290589 9.52561882712928 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 [DP]VVNE 2.3923 - 41 1 1.034 34019.4 1.0 8783 4827 13599 HBL1_DMSO_200M_050219_2,13612 HBL1_DMSO_200M_050219_2,13612,LVFHTRPN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13613 72.103 20.0 1462800.0 25 0 162110.0 + 18345 KVLEYVIKV 9 71 364.23410622040353 1089.680489261411 3 364.2334167361259 MULTI CID FTMS 0 0 0 13599 947756.0625 0.7113972580324184 -1 0.1854782104492187 14 Unmodified _KVLEYVIKV_ ENSG00000198681|ENST00000356661|MAGEA1 12.240655878213236 0.5053430591993562 4 [K{I|L}]VEYV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 [K{I|L}]VEY + + 19.693 14.437 2.2831 1.8072 1.8072 44.458 0.0 0.0 0.0 0.0 5.255762612236907 0.0 0.0 0 0.5 0.0 0.0 0.0 [K{I|L}]VEYV{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 1.8072 - 35 + 1 1.034 27898.7 1.0 8784 4827 13599 HBL1_DMSO_200M_050219_2,13613 HBL1_DMSO_200M_050219_2,13613,KVLEYVIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13614 72.104 38.0 1335200.0 25 0 97246.0 + 16342 IYLPAAQTM 9 84 504.2649122637417 1006.5152715942834 2 504.2645446658134 MULTI CID FTMS 0 0 0 13599 908506.75 0.6074232283502405 -2 0.2976226806640625 15 Unmodified _IYLPAAQTM_ ENSG00000198836|ENST00000361510|OPA1;nc|ENSG00000198836|O60313-11|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313|OPA1 38.15118350030904 0.0856056900103839 4 [Y{I|L}]{I|L} 3 6 28.244 0.0 0.0 2.8061 0.0 0.0 0.0 614.2598449187552 614.2598449187552 8.78022170376731 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + [Y{I|L}]{I|L} 2.8061 + + 226 1 1.034 45750.3 1.0 8785 4827 13599 HBL1_DMSO_200M_050219_2,13614 HBL1_DMSO_200M_050219_2,13614,IYLPAAQTM True True IYLPAAQTM 72.104027 504.264544665813 13197544.0 13599.0 ENSG00000198836|ENST00000361510|OPA1;;nc|ENSG00000198836|O60313-9|OPA1;;nc|ENSG00000198836|O60313-2|OPA1;;nc|ENSG00000198836|O60313-13|OPA1;;nc|ENSG00000198836|O60313|OPA1;;nc|ENSG00000198836|O60313-11|OPA1 7.36444107691447 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13615 72.11 349.0 481920.0 25 0 93731.0 -1 0 106 1106.445536294556 3316.314779483868 3 1106.780444324017 MULTI CID FTMS 0 0 0 13599 764312.5625 0.5002945146714044 1 -0.0484161376953125 16 4 GYCT{I|L}NT{M(Oxidation (M))|F} 8 -1 31.852 0.0 0.0 0.96047 0.0 0.0 1944.6707516906388 469.2058809869751 2413.876632677614 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.805462187404089 GYCT{I|L}NT{M(Oxidation (M))|F} 0.96047 - 2596 + 1 1.034 133908.3 1.0 8786 4827 13599 HBL1_DMSO_200M_050219_2,13615 HBL1_DMSO_200M_050219_2,13615, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13616 72.112 38.0 1378100.0 25 0 165640.0 + 15970 ITCSQHELH 9 90 534.2490498935191 1066.483546853838 2 534.2491943240166 MULTI CID FTMS 0 0 0 13599 750138.4375 0.9780475368873855 1 -0.0484161376953125 17 Unmodified _ITCSQHELH_ REV__ENSG00000090376|ENST00000261233|IRAK3;REV__nc|ENSG00000090376|Q9Y616-2|IRAK3 16.942295170755138 0.3780752226737986 4 {I|L}EE{I|L}E[H{I|L}] 7 -1 35.023 0.0 0.0 3.2839 0.0 0.0 185.03435195990195 0.0 185.03435195990195 0.0 14.08062690951219 0.0 0.0 0 0.0 0.0 1.174742501084005 0.0 {I|L}EE{I|L}E[H{I|L}] 3.2839 - 378 + 1 1.034 46024.5 1.0 8787 4827 13599 HBL1_DMSO_200M_050219_2,13616 HBL1_DMSO_200M_050219_2,13616,ITCSQHELH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13617 72.114 130.0 511400.0 25 0 52861.0 -1 0 56 882.0843687297199 3524.3083690524795 4 882.5861083865166 MULTI CID FTMS 0 0 0 13599 707469.3125 0.5708057221822507 1 -0.0484161376953125 18 4 DT 2 -1 14.222 0.0 0.0 0.40353 0.0 0.0 2807.957873261016 497.25242029361567 3305.210293554632 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 DT 0.40353 - 20 + 1 1.034 60230.0 1.0 8788 4827 13599 HBL1_DMSO_200M_050219_2,13617 HBL1_DMSO_200M_050219_2,13617, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13618 72.116 58.0 1223900.0 25 0 77099.0 + 16938 KILPDLNTV 9 105 506.8057701348955 1011.596987336591 2 506.8058044314384 MULTI CID FTMS 0 0 0 13599 619143.1875 0.218101741011064 -2 0.2976226806640625 19 Unmodified _KILPDLNTV_ ENSG00000142207|ENST00000382751|URB1 38.17557092003332 0.0854718145212029 4 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}K{I|L}NTV 9 4 + 44.319 0.0 0.0 4.3811 4.3811 74.472 0.0 0.0 0.0 5.31478917042255 9.137342758552691 5.31478917042255 5.31478917042255 0 0.6237125054200234 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}K{I|L}NTV;[VP]E{I|L}K{I|L}NTV;[DP]{I|L}{I|L}K{I|L}NTV;[{I|L}P]D{I|L}K{I|L}NTV;{NN|[MP]|[D{I|L}]|[EV]}P{I|L}K{I|L}GGTV;[VP]E{I|L}K{I|L}GGTV;[K{I|L}]{I|L}[DP]{I|L}NTV;[DP]{I|L}{I|L}K{I|L}GGTV;{NN|[MP]|[D{I|L}]|[EV]}PN{I|L}[K{I|L}]TV;{I|L}{I|L}K[DP]{I|L}NTV 4.3811;3.8557;3.6902;3.5248;3.4709;2.9455;2.8691;2.7799;2.7533;2.6321 -;-;-;-;-;-;+;-;-;- + 605 1 1.034 59494.1 1.0 8789 4827 13599 HBL1_DMSO_200M_050219_2,13618 HBL1_DMSO_200M_050219_2,13618,KILPDLNTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13619 72.12 148.0 572490.0 25 0 57637.0 + 17834 KQLDDLKVEL 10 115 600.8453419844042 1199.6761310356085 2 600.8456909060478 MULTI CID FTMS 0 0 0 13599 634324.5 0.0023603757171127 12 -1.1734161376953125 20 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 125.65618451087089 0.0002200437111066 4 {[QN]|[E{I|L}]|[KN]}KND{I|L}KVE{I|L} 10 3 + 96.407 0.0 0.0 8.0361 8.0361 82.34 0.0 0.0 0.0 2.878559472270581 70.74539712336197 2.878559472270581 2.2134030500787816 0 1.798455006504028 0.6020599913279624 1.3539171939081172 0.6747425010840047 {[QN]|[E{I|L}]|[KN]}KND{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}KND{I|L}VKE{I|L};[AG]K{I|L}DD{I|L}KVE{I|L};[KQ]{I|L}DD{I|L}KVE{I|L};[AG]K{I|L}DD{I|L}VKE{I|L};[KQ]{I|L}DD{I|L}VKE{I|L};{[QN]|[E{I|L}]|[KN]}KGGD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}KGGD{I|L}VKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[KQ]{I|L}VKE{I|L} 8.0361;7.8516;7.6489;7.5448;7.4644;7.3603;7.2722;7.161;7.0877;6.9765 -;-;-;+;-;-;-;-;-;- + 2604 1 1.034 64709.2 1.0 8790 4827 13599 HBL1_DMSO_200M_050219_2,13619 HBL1_DMSO_200M_050219_2,13619,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13621 72.124 77.0 899360.0 25 0 134660.0 -1 VAETCICHK 9 77 559.2590222286663 1116.5034915241324 2 559.2592651247978 MULTI CID FTMS 0 0 0 13620 726179.25 1.0 0 0.0 1 2 Carbamidomethyl (C) _VAETC(Carbamidomethyl (C))IC(Carbamidomethyl (C))HK_ ENST00000232375.7_1_3:48556200-48556449:-|nuORF 15.847184025352805 0.4077185912009129 4 {[VA]|[{I|L}G]}PDE{I|L} 6 -1 48.945 0.0 0.0 4.3838 0.0 0.0 0.0 489.1691477090477 489.1691477090477 26.54947189572098 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}PDE{I|L} 4.3838 - 112 + 1 1.034 62049.7 1.0 8791 4828 13620 HBL1_DMSO_200M_050219_2,13621 HBL1_DMSO_200M_050219_2,13621,VAETCICHK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13622 72.132 437.0 319510.0 25 0 87327.0 -1 0 62 1196.1632992758275 3585.468068427684 3 1196.834155261517 MULTI CID FTMS 0 0 0 13620 441762.09375 0.3309826544175843 2 -0.283416748046875 2 4 C(Carbamidomethyl (C)){M(Oxidation (M))|F}GC(Carbamidomethyl (C))YY{M(Oxidation (M))|F}G 8 -1 17.344 0.0 0.0 0.48374 0.0 0.0 1046.418813451355 1481.6446434411514 2528.063456892506 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){M(Oxidation (M))|F}GC(Carbamidomethyl (C))YY{M(Oxidation (M))|F}G 0.48374 - 73 + 1 1.034 117033.2 1.0 8792 4828 13620 HBL1_DMSO_200M_050219_2,13622 HBL1_DMSO_200M_050219_2,13622, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13623 72.134 71.0 824610.0 25 0 127260.0 + 22651 LPYQPPAL 8 72 449.7555090787788 897.4964652243576 2 449.7556640505791 MULTI CID FTMS 0 0 0 13620 964569.3125 0.7186086906476857 -1 0.0484161376953125 3 Unmodified _LPYQPPAL_ ENSG00000165684|ENST00000684778|SNAPC4 42.96799951952854 0.1846367511955703 4 {[VA]|[{I|L}G]}A{M(Oxidation (M))|F}{I|L}PPA{I|L} 9 4 + 54.939 0.0 0.0 6.1214 6.1214 87.071 0.0 0.0 0.0 9.374180157718364 19.902953031565858 9.374180157718364 9.374180157718364 0 1.492992819099939 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}A{M(Oxidation (M))|F}{I|L}PPA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}PPA{I|L};[PA][YG]{I|L}PPA{I|L};[Q{I|L}]{M(Oxidation (M))|F}{I|L}PPA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QPPA{I|L};[{I|L}P]YQPPA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]{I|L}PPA{I|L};[PA]P[YV]APA{I|L};[PA]P{I|L}[YG]PA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[AG]PPA{I|L} 6.1214;5.0769;4.6845;4.6669;4.4061;4.1589;4.0449;3.5404;3.4324;3.3741 -;-;-;-;-;+;-;-;-;- + 296 1 1.034 49290.1 1.0 8793 4828 13620 HBL1_DMSO_200M_050219_2,13623 HBL1_DMSO_200M_050219_2,13623,LPYQPPAL False True LPYQPPAL 72.133566 449.755664050579 21275336.0 13620.0 ENSG00000165684|ENST00000684778|SNAPC4 2.4741511841615043 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13624 72.135 50.0 1244300.0 25 0 153260.0 + 12103 GQIEELEHL 9 90 534.2722988442732 1066.5300447553464 2 534.2726928591728 MULTI CID FTMS 0 0 0 13620 642656.375 1.0 0 0.0 4 Unmodified _GQIEELEHL_ ENSG00000103494|ENST00000647211|RPGRIP1L;nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L 41.95555342248728 0.0647214845423414 4 {[QG]|[NA]}{I|L}EE{I|L}E[H{I|L}] 9 0 + 54.427 0.0 0.0 5.1032 5.1032 85.551 0.0 0.0 0.0 22.14560679702416 6.307578903143373 6.307578903143373 20.30471667985921 0 0.8494850021680094 0.721246399047171 1.1307196863200843 0.0 + + {[QG]|[NA]}{I|L}EE{I|L}E[H{I|L}];{[QG]|[NA]}{I|L}E[TA][QA][H{I|L}];{[QG]|[NA]}{I|L}E[PG]D[VG][VP];{[QG]|[NA]}{I|L}E[PG][RD][VP];{[QN]|[E{I|L}]|[KN]}KD{M(Oxidation (M))|F}V[WM];[AG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F}V[WM];{[QN]|[E{I|L}]|[KN]}KDV{M(Oxidation (M))|F}[WM];[{I|L}V][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}V[WM];[AG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V{M(Oxidation (M))|F}[WM];{[QG]|[NA]}{I|L}{M(Oxidation (M))|F}[PG][QA][H{I|L}] 5.1032;3.1994;3.0852;3.0331;2.66;2.477;2.3777;2.2599;2.1947;2.1231 +;-;-;-;-;-;-;-;-;- + 498 + 1 1.034 55011.4 1.0 8794 4828 13620 HBL1_DMSO_200M_050219_2,13624 HBL1_DMSO_200M_050219_2,13624,GQIEELEHL True True GQIEELEHL 72.1349 534.272692859173 10467279.0 13620.0 nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L;;ENSG00000103494|ENST00000647211|RPGRIP1L 6.725686709086101 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13625 72.137 124.0 436390.0 25 0 40063.0 + 41954 VQIKDVNLEV 10 84 578.831942107247 1155.6493312812938 2 578.8322631716728 MULTI CID FTMS 0 0 0 13620 610622.25 1.0 0 0.0 5 Unmodified _VQIKDVNLEV_ ENSG00000123609|ENST00000243346|NMI 57.24910588100465 0.0438022649904578 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[QT]{I|L}N{I|L}EV 10 3 + 72.923 0.0 0.0 6.3102 6.3102 85.1 0.0 0.0 0.0 22.98332479720628 54.35322333677558 22.98332479720628 8.26606256887672 0 1.2672203223519531 1.2218487496163564 0.0 1.5356668758921828 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[QT]{I|L}N{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}[DV]K{I|L}N{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[QT]{I|L}GG{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}N{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[WR]N{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}[DV]K{I|L}GG{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}GG{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[WR]GG{I|L}EV;{[QN]|[E{I|L}]|[KN]}[QA]K{I|L}N{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}K{I|L}N{I|L}EV 6.3102;5.5949;5.5171;5.4425;5.3774;4.8019;4.6457;4.5806;4.0596;3.9096 -;-;-;-;-;-;-;-;-;- 659 1 1.034 48260.3 1.0 8795 4828 13620 HBL1_DMSO_200M_050219_2,13625 HBL1_DMSO_200M_050219_2,13625,VQIKDVNLEV True True VQIKDVNLEV 72.137464 578.832263171673 4122948.25 13620.0 ENSG00000123609|ENST00000243346|NMI 6.470056851704915 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13626 72.139 80.0 1385100.0 25 0 100840.0 + 45105 YPYPYPHTLY 10 121 657.3142409885264 1312.6139290438527 2 657.3141967654228 MULTI CID FTMS 0 0 0 13620 608015.875 0.3394426767538431 -2 0.2338943481445312 6 Unmodified _YPYPYPHTLY_ ENSG00000116221|ENST00000360840|MRPL37 112.59319219568356 0.0013023034114315 4 YPYPYCTV{I|L} 9 4 92.952 0.0 0.0 7.0814 0.0 0.0 0.0 210.08913599185783 210.08913599185783 49.5682190834128 0.0 0.0 0.0 0 1.305462187404089 2.0 1.1549471895720984 0.0 YPYPYCTV{I|L} 7.0814 - 3637 + 1 1.034 86504.1 1.0 8796 4828 13620 HBL1_DMSO_200M_050219_2,13626 HBL1_DMSO_200M_050219_2,13626,YPYPYPHTLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13627 72.142 157.0 708600.0 25 0 83819.0 22459 LPVAQVIF 8 108 443.773538906193 885.532524879186 2 443.7738525271416 MULTI CID FTMS 0 0 0 13620 582066.5 0.0339674463308553 52 -5.130439758300781 7 Unmodified _LPVAQVIF_ ENST00000254322.2_1_19:14625909-14626227:-|nuORF 24.67388899826682 0.525179942228231 4 {I|L}PNVVVV{M(Oxidation (M))|F} 8 4 + 50.182 0.0 0.0 5.6669 5.6669 85.125 0.0 0.0 0.0 23.750612633917 1.6824376479242176 1.6824376479242176 9.262137858390815 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PNVVVV{M(Oxidation (M))|F};{I|L}PGGVVVV{M(Oxidation (M))|F};{I|L}[YV]V[KP][PA] 5.6669;4.621;0.38771 -;-;- 362 + 1 1.034 90127.1 1.0 8797 4828 13620 HBL1_DMSO_200M_050219_2,13627 HBL1_DMSO_200M_050219_2,13627,LPVAQVIF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13628 72.144 80.0 874200.0 25 0 93266.0 + 39385 VAIESTPMI 9 100 480.7555128327339 959.496472732268 2 480.7568542361259 MULTI CID FTMS 0 0 0 13620 594699.9375 0.5062595031407651 -1 0.0484161376953125 8 Unmodified _VAIESTPMI_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON 46.92087301778293 0.0471210510596396 4 {M(Oxidation (M))|F}PM[KP]PM{I|L} 8 6 + 38.784 0.0 0.0 4.0421 4.0421 71.201 0.0 0.0 0.0 17.866002667201343 14.552593986562812 14.552593986562812 3.802112417116057 0 0.5418727718234408 0.0 0.0 0.0 {M(Oxidation (M))|F}PM[KP]PM{I|L};{M(Oxidation (M))|F}PM[KP]MP{I|L};{M(Oxidation (M))|F}{[ET]|[MV]}E[QP]P{I|L};{M(Oxidation (M))|F}PM[TA][PS]P{I|L};{M(Oxidation (M))|F}[KC]Q[QP]P{I|L};[WK]{[QG]|[NA]}TPM{I|L};[WK]{[QG]|[NA]}TMP{I|L};{M(Oxidation (M))|F}P[HV][HN]P{I|L};{M(Oxidation (M))|F}[KC]V{I|L}[HD]V;{M(Oxidation (M))|F}[KG]{M(Oxidation (M))|F}[WY]{I|L} 4.0421;3.6458;2.4461;2.3163;2.2626;2.0961;1.6999;1.5713;1.1084;1.0386 -;-;-;-;-;-;-;-;-;- 628 + 1 1.034 55950.8 1.0 8798 4828 13620 HBL1_DMSO_200M_050219_2,13628 HBL1_DMSO_200M_050219_2,13628,VAIESTPMI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13629 72.146 47.0 984130.0 25 0 66198.0 -1 LFCSMSHSY 9 73 566.2324899467217 1130.4504269602432 2 566.2299072146416 MULTI CID FTMS 0 0 0 13620 526033.6875 1.0 0 0.0 9 Carbamidomethyl (C) _LFC(Carbamidomethyl (C))SMSHSY_ ENST00000581067.1_1_18:5237365-5237662:-|nuORF 8.593279151180031 0.6146971463335029 4 Y 1 -1 14.604 0.0 0.0 1.2919 0.0 0.0 949.375840023523 0.0 949.375840023523 0.0 3.7666383332930575 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2919 + + 42 + 1 1.034 42930.9 1.0 8799 4828 13620 HBL1_DMSO_200M_050219_2,13629 HBL1_DMSO_200M_050219_2,13629,LFCSMSHSY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13630 72.148 109.0 751080.0 25 0 77396.0 + 36249 SYCLDLETE 9 121 536.7287060756178 1071.4428592180354 2 536.7297241091728 MULTI CID FTMS 0 0 0 13620 482647.5625 1.0 0 0.0 10 Unmodified _SYCLDLETE_ REV__ENSG00000008300|ENST00000164024|CELSR3;REV__nc|ENSG00000008300|Q9NYQ7-2|CELSR3 11.640296217721598 0.521594087909532 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YTP{I|L} 6 -1 36.054 0.0 0.0 3.365 0.0 0.0 0.0 350.08463847417687 350.08463847417687 21.45008331093186 0.0 0.0 0.0 0 0.75 0.0 1.5189301784845295 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YTP{I|L} 3.365 - 275 1 1.034 71414.8 1.0 8800 4828 13620 HBL1_DMSO_200M_050219_2,13630 HBL1_DMSO_200M_050219_2,13630,SYCLDLETE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13631 72.15 113.0 561000.0 25 0 117140.0 + 36675 TAYPQVVVV 9 89 488.27941093069165 974.5442689281832 2 488.2788879275322 MULTI CID FTMS 0 0 0 13620 422847.375 0.0756743555761125 -4 0.3872222900390625 11 Unmodified _TAYPQVVVV_ ENSG00000166532|ENST00000535829|RIMKLB;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;nc|ENSG00000166532|Q9ULI2-2|RIMKLB 22.736283301280096 0.2418982879461534 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T[QP]VVVV 9 2 + 33.094 0.0 0.0 3.3959 3.3959 65.651 0.0 0.0 0.0 1.760912590556817 9.889917747712651 1.760912590556817 1.760912590556817 0 0.7742275032520141 1.3010299956639813 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T[QP]VVVV;[TA]Y[QP]VVVV;[QP]VV[TA]YVV;[QP]VY[TA]VVV;[QP]V[TA]YVVV;[QP]V[TA]VYVV;VV[QP][TA]YVV;{[VA]|[{I|L}G]}[PG]V[TA]YVV;{[VA]|[{I|L}G]}[PG]Y[TA]VVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KP]{[CP]|[EA]}VVV 3.3959;3.2152;2.9091;2.8318;2.3698;2.1106;1.8612;1.8272;1.7499;1.6 -;+;-;-;-;-;-;-;-;- + 253 1 1.034 51278.7 1.0 8801 4828 13620 HBL1_DMSO_200M_050219_2,13631 HBL1_DMSO_200M_050219_2,13631,TAYPQVVVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13632 72.159 482.0 414280.0 25 0 143780.0 -1 0 105 885.826852931836 3539.278305860944 4 886.0782348513603 MULTI CID FTMS 0 0 0 13620 391345.46875 0.7353826674302132 2 -0.283416748046875 12 4 {I|L}P{M(Oxidation (M))|F}{I|L}[TA][QP] 8 -1 33.906 0.0 0.0 0.95799 0.0 0.0 2653.811339163481 0.0 2653.811339163481 0.0 20.96955242594412 0.0 0.0 0 0.0 0.0 1.4291746928241125 0.5 {I|L}P{M(Oxidation (M))|F}{I|L}[TA][QP] 0.95799 - 416 + 1 1.034 153146.0 1.0 8802 4828 13620 HBL1_DMSO_200M_050219_2,13632 HBL1_DMSO_200M_050219_2,13632, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13633 72.161 90.0 516000.0 25 0 40452.0 + -1 AQLGLCSPPL 10 114 528.2801175504819 1054.5456821677635 2 529.7871581912041 MULTI CID FTMS 0 0 0 13620 335044.3125 0.4808129004413027 -5 0.5711746215820312 13 Carbamidomethyl (C) _AQLGLC(Carbamidomethyl (C))SPPL_ REV__ENST00000371269.7_1_1:55317199-55317424:-|nuORF 10.073929032068715 0.6785112666868882 4 [QA]{I|L}G 4 -1 15.015 0.0 0.0 1.4238 0.0 0.0 0.0 682.319399779345 682.319399779345 -0.0433966598317336 0.0 -0.0433966598317336 0.0 0 0.0 0.721246399047171 0.0 0.2396518287104437 [QA]{I|L}G 1.4238 + + 889 1 1.034 45780.9 1.0 8803 4828 13620 HBL1_DMSO_200M_050219_2,13633 HBL1_DMSO_200M_050219_2,13633,AQLGLCSPPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13634 72.172 656.0 320500.0 25 0 37023.0 + 17844 KQLDDLKVEL 10 203 400.8994449725738 1199.6765055179214 3 400.8992797732353 MULTI CID FTMS 0 0 0 13620 283376.90625 0.0019306429966397 13 -1.3764419555664062 14 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 78.61045856554632 0.0182065998627436 4 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KEV{I|L} 10 6 + 90.888 0.0 0.0 7.576 7.576 87.306 0.0 0.0 0.0 8.80674456733729 16.53212513775344 8.80674456733729 6.165579780723846 0 0.8252574989159953 1.6989700043360187 1.4802046884880935 1.0189301784845295 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KEV{I|L};{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}KEV{I|L};[KQ]{I|L}DD{I|L}KEV{I|L};[Q{I|L}]KDD{I|L}KEV{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]D{I|L}KEV{I|L};{[TV]|[{I|L}S]}[VG]QD{I|L}KEV{I|L};[AG]K{I|L}DD{I|L}KEV{I|L};[K{I|L}]QDD{I|L}KEV{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[AG]K{I|L}KEV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}EE{I|L}KEV{I|L} 7.576;7.0621;6.8419;6.8156;6.8121;6.7959;6.7147;6.49;6.2982;6.1833 -;-;-;-;-;-;-;-;-;- 7913 1 1.034 161729.7 1.0 8804 4828 13620 HBL1_DMSO_200M_050219_2,13634 HBL1_DMSO_200M_050219_2,13634,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13635 72.183 626.0 377970.0 25 0 45411.0 + 41475 VPLPTAPNI 9 192 461.27364972929513 920.5327465253904 2 461.2742492556572 MULTI CID FTMS 0 0 0 13620 272052.84375 0.466002203659505 2 -0.283416748046875 15 Unmodified _VPLPTAPNI_ ENSG00000197102|ENST00000360184|DYNC1H1 57.47134341890925 0.0274820932774257 4 [{I|L}P][TP]AVPN{I|L} 9 2 + 32.199 0.0 0.0 3.4979 3.4979 71.201 0.0 0.0 0.0 4.906042616576283 7.284758471119538 4.906042616576283 4.906042616576283 0 0.5172203223519531 1.3979400086720375 0.9456290139465237 0.0 [{I|L}P][TP]AVPN{I|L};[TP]A[{I|L}P]VPN{I|L};[{I|L}P]SA[{I|L}P]PN{I|L};[VP]TA[{I|L}P]PN{I|L};[{I|L}P]S[{I|L}P]APN{I|L};[VP]T[{I|L}P]APN{I|L};[{I|L}P][TP]VAPN{I|L};[TP][{I|L}P]AVPN{I|L};[TP]AV[{I|L}P]PN{I|L};[{I|L}P]V[TP]APN{I|L} 3.4979;2.9649;2.9355;2.8302;2.4769;2.3716;2.3298;2.2934;2.2555;2.188 -;-;-;-;-;-;-;-;-;- 1124 1 1.034 180528.2 1.0 8805 4828 13620 HBL1_DMSO_200M_050219_2,13635 HBL1_DMSO_200M_050219_2,13635,VPLPTAPNI True True VPLPTAPNI 72.183081 461.274249255657 7492504.0 13620.0 ENSG00000197102|ENST00000360184|DYNC1H1 2.271888573964437 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13636 72.193 571.0 457590.0 25 0 26833.0 + 13854 HVIDSIVGDGI 11 205 562.8011584963792 1123.5877640595584 2 562.8012573122978 MULTI CID FTMS 0 0 0 13620 228202.640625 0.3508634502377756 -1 0.0484161376953125 16 Unmodified _HVIDSIVGDGI_ ENSG00000166801|ENST00000675163|FAM111A 152.41221235671458 0.0005302153056441 4 [HV]{I|L}DS{I|L}VGDG{I|L} 11 0 + 111.45 0.0 0.0 9.9192 9.9192 95.016 0.0 0.0 0.0 21.09122312673766 84.76000736899613 21.09122312673766 9.731975075880342 0 1.7728787452803376 1.5228787452803376 1.9802046884880933 0.0 + + [HV]{I|L}DS{I|L}VGDG{I|L};[HV]{I|L}DSV{I|L}GDG{I|L};[HV]{I|L}DTVVGDG{I|L};[HV]{I|L}DS{I|L}VND{I|L};[QP]A[PA]S{I|L}VGDG{I|L};[QA]P[PA]S{I|L}VGDG{I|L};{[TV]|[{I|L}S]}[DV]H{I|L}VGDG{I|L};[HV]{I|L}DSV{I|L}ND{I|L};[VS]{NN|[MP]|[D{I|L}]|[EV]}H{I|L}VGDG{I|L};[QP]A[PA]SV{I|L}GDG{I|L} 9.9192;9.053;8.7374;7.1832;6.9992;6.9242;6.5819;6.317;6.2768;6.1331 +;-;-;-;-;-;-;-;-;- + 6306 1 1.034 198560.2 1.0 8806 4828 13620 HBL1_DMSO_200M_050219_2,13636 HBL1_DMSO_200M_050219_2,13636,HVIDSIVGDGI True True HVIDSIVGDGI 72.1931 562.801257312298 12390957.0 13620.0 ENSG00000166801|ENST00000675163|FAM111A 6.576817671457927 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13637 72.204 573.0 390460.0 25 0 40442.0 + -1 LTLCCVAPCSP 11 214 582.2666369635583 1162.5187209939163 2 582.2669555544853 MULTI CID FTMS 0 0 0 13620 224409.796875 0.4084848313509343 -1 0.0484161376953125 17 Carbamidomethyl (C) _LTLC(Carbamidomethyl (C))CVAPCSP_ REV__ENSG00000149311|ENST00000675843|ATM 31.26834338654808 0.3580123756476716 4 {I|L}TTNT{[QC]|[C(Carbamidomethyl (C))A]}KA 9 -1 51.331 0.0 0.0 4.4155 0.0 0.0 0.0 199.0553682916625 199.0553682916625 19.77604879663963 0.0 0.0 0.0 0 1.6549471895720984 1.3010299956639813 0.0 0.2887254899964357 {I|L}TTNT{[QC]|[C(Carbamidomethyl (C))A]}KA 4.4155 - 21624 + 1 1.034 165963.8 1.0 8807 4828 13620 HBL1_DMSO_200M_050219_2,13637 HBL1_DMSO_200M_050219_2,13637,LTLCCVAPCSP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13638 72.218 772.0 135210.0 25 0 48106.0 -1 0 66 1066.095816565682 3195.265620297246 3 1066.766040027142 MULTI CID FTMS 0 0 0 13620 202478.921875 0.6338297741423552 2 -0.283416748046875 18 4 EE{I|L}E[H{I|L}] 6 -1 19.927 0.0 0.0 0.62363 0.0 0.0 2426.892586705253 0.0 2426.892586705253 0.0 5.233871898888156 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 EE{I|L}E[H{I|L}] 0.62363 - 380 + 1 1.034 81758.2 1.0 8808 4828 13620 HBL1_DMSO_200M_050219_2,13638 HBL1_DMSO_200M_050219_2,13638, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13639 72.23 733.0 118420.0 25 0 9253.6 + -1 ELSIINCIMRK 11 136 688.8732429358736 1375.731932938547 2 688.8753539919853 MULTI CID FTMS 0 0 0 13620 191854.28125 0.1874582791584522 2 -0.283416748046875 19 Carbamidomethyl (C) _ELSIINC(Carbamidomethyl (C))IMRK_ REV__ENSG00000175097|ENST00000311485|RAG2 22.736283301280096 0.5583477779825423 4 [{I|L}T]D{I|L}DM[QT]{I|L}[{I|L}T]{I|L} 12 -1 + 66.371 0.0 0.0 4.8244 4.8244 69.134 0.0 0.0 0.0 3.6847902871111273 11.224701621803987 3.6847902871111273 1.1711339909634404 0 0.3252574989159953 1.6989700043360187 1.1725924581435252 0.0 [{I|L}T]D{I|L}DM[QT]{I|L}[{I|L}T]{I|L};[{I|L}T]D{I|L}{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C))[K{I|L}]Q{I|L};[{I|L}T]D{I|L}{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C))[K{I|L}]K{I|L};[{I|L}T]D{I|L}{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C))GA[K{I|L}]{I|L};[{I|L}T]D{I|L}{I|L}D[C(Carbamidomethyl (C))S]{I|L}[{I|L}T]{I|L};[{I|L}T]D{I|L}DM[WR][{I|L}T]{I|L};[{I|L}T]D{I|L}{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C))Q[K{I|L}]{I|L};{[QN]|[E{I|L}]|[KN]}S{I|L}DM[QT]{I|L}[{I|L}T]{I|L};[{I|L}T]D{I|L}DM{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A[K{I|L}]{I|L};{[QN]|[E{I|L}]|[KN]}S{I|L}{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C))[K{I|L}]Q{I|L} 4.8244;4.7393;4.7393;4.6913;4.6005;4.5626;4.5575;4.5565;4.4776;4.4714 -;-;-;-;-;-;-;-;-;- 3104 1 1.034 67306.3 1.0 8809 4828 13620 HBL1_DMSO_200M_050219_2,13639 HBL1_DMSO_200M_050219_2,13639,ELSIINCIMRK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13640 72.238 378.0 394850.0 25 0 27966.0 18740 LALHMSLRT 9 160 347.8678074778171 1040.5815930336514 3 348.2023498415947 MULTI CID FTMS 0 0 0 13620 194083.125 1.0 0 0.0 20 Unmodified _LALHMSLRT_ ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1 5.731851221503515 0.7145881442174411 4 [{I|L}A]{I|L}HW 5 5 32.734 0.0 0.0 3.1457 0.0 0.0 0.0 417.226173439572 417.226173439572 14.233937431123277 0.0 0.0 0.0 0 0.1307196863200844 1.6989700043360187 0.0 0.0 [{I|L}A]{I|L}HW 3.1457 - 474 + 1 1.034 131670.4 1.0 8810 4828 13620 HBL1_DMSO_200M_050219_2,13640 HBL1_DMSO_200M_050219_2,13640,LALHMSLRT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13642 72.243 18.0 3281600.0 25 0 315770.0 + 10167 FPYIQKGL 8 80 483.2765503290493 964.5385477248986 2 483.2766296267509 MULTI CID FTMS 0 0 0 13641 3126173.0 0.983360779775156 1 -0.1647796630859375 1 Unmodified _FPYIQKGL_ ENSG00000119285|ENST00000366582|HEATR1 38.15118350030904 0.2652218139009398 4 {M(Oxidation (M))|F}PY{I|L}QKG{I|L} 8 0 + 58.448 0.0 0.0 6.0597 6.0597 86.727 0.0 0.0 0.0 26.641434418070347 7.474250108400469 7.474250108400469 9.262137858390815 0 0.6505149978319906 0.0 0.0 0.3807196863200844 + + {M(Oxidation (M))|F}PY{I|L}QKG{I|L};{M(Oxidation (M))|F}PY{I|L}[AG]KG{I|L} 6.0597;5.0995 +;- + 149 + 1 1.035 50014.1 1.0 8811 4829 13641 HBL1_DMSO_200M_050219_2,13642 HBL1_DMSO_200M_050219_2,13642,FPYIQKGL False True FPYIQKGL 72.242714 483.276629626751 68297384.0 13641.0 ENSG00000119285|ENST00000366582|HEATR1 6.710947036743164 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13643 72.244 52.0 882100.0 25 0 88763.0 15479 IPRYELLV 8 77 501.80332953651566 1001.5921061398312 2 501.8029968142509 MULTI CID FTMS 0 0 0 13641 789175.25 0.4011046989412666 2 -0.234375 2 Unmodified _IPRYELLV_ ENSG00000110237|ENST00000263674|ARHGEF17 26.268140514670165 0.4916104673212489 4 {I|L}P 2 6 41.766 0.0 0.0 4.17 0.0 0.0 0.0 788.4304903619749 788.4304903619749 28.667053245199625 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 4.17 + + 179 + 1 1.035 44848.5 1.0 8812 4829 13641 HBL1_DMSO_200M_050219_2,13643 HBL1_DMSO_200M_050219_2,13643,IPRYELLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13644 72.245 3.9 16021000.0 25 0 2184400.0 + 15287 IPIPIRTP 8 63 453.7924634572879 0 453.7924987673759 PEAK CID FTMS 0 0 0 13641 15734644.0 0.4851413580047453 -5 0.505859375 3 Unmodified _IPIPIRTP_ REV__ENSG00000187048|ENST00000310638|CYP4A11 19.256988751693697 0.4320151646958274 4 P{I|L}W[{I|L}T]{I|L} 6 -1 22.906 0.0 0.0 2.5295 0.0 0.0 113.08336230672953 66.03573785953358 179.11910016626308 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 P{I|L}W[{I|L}T]{I|L} 2.5295 - 74 + 1 1.035 57474.3 1.0 8813 4829 13641 HBL1_DMSO_200M_050219_2,13644 HBL1_DMSO_200M_050219_2,13644,IPIPIRTP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13645 72.246 44.0 1842100.0 25 0 199480.0 + 22322 LPSHGVPLI 9 100 466.7820194832304 931.5494860332608 2 466.7819091677666 MULTI CID FTMS 0 0 0 13641 1451402.25 0.0864440651065623 -3 0.3525314331054687 4 Unmodified _LPSHGVPLI_ ENSG00000089053|ENST00000261819|ANAPC5;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5 50.855029805455786 0.0384952370514206 4 [{I|L}P][HS]GVP{I|L}{I|L} 9 0 + 62.171 0.0 0.0 6.6739 6.6739 83.656 0.0 0.0 0.0 5.351832509478825 14.973024840566469 5.351832509478825 5.351832509478825 0 1.305462187404089 2.0 0.3252574989159953 0.0 + + [{I|L}P][HS]GVP{I|L}{I|L};[DP][HK]{I|L}P{I|L}{I|L};[{I|L}P][HS]GPV{I|L}{I|L};[DP][HK]P{I|L}{I|L}{I|L};{[HG]|PP}VSP{I|L}P{I|L}{I|L};{[HG]|PP}[PS]V{I|L}P{I|L}{I|L};[PS][H{I|L}]GVP{I|L}{I|L};{[HG]|PP}[PS]{I|L}VP{I|L}{I|L};{[HG]|PP}VSPP{I|L}{I|L}{I|L};{[HG]|PP}V[TP]VP{I|L}{I|L} 6.6739;6.0994;4.9527;4.8904;4.8881;4.5629;4.0148;3.9298;3.679;3.4725 +;-;-;-;-;-;-;-;-;- + 451 1 1.035 67684.2 1.0 8814 4829 13641 HBL1_DMSO_200M_050219_2,13645 HBL1_DMSO_200M_050219_2,13645,LPSHGVPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13646 72.248 38.0 1407200.0 25 0 129030.0 + 41564 VPPEILNNV 9 98 497.7825498997915 993.550546866383 2 497.7824890017509 MULTI CID FTMS 0 0 0 13641 970957.0 0.1137302103891233 -6 0.6898117065429688 5 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 46.020951573049366 0.0490941689151868 4 [VP][EP]{I|L}{I|L}NNV 9 0 + 43.535 0.0 0.0 4.3817 4.3817 67.684 0.0 0.0 0.0 1.249387366082999 9.335295873671754 1.249387366082999 1.249387366082999 0 0.8182503180159344 2.0 0.0 0.0 + + [VP][EP]{I|L}{I|L}NNV;[EP]P{I|L}V{I|L}NNV;[EP]P{I|L}{I|L}VNNV;[EP]{I|L}PV{I|L}NNV;[EP]PV{I|L}{I|L}NNV;[VP][EP]{I|L}QVNV;[EP]{I|L}P{I|L}VNNV;[EP]P{I|L}VQVNV;[VP][EP]{I|L}{I|L}GGNV;[{I|L}P]EPV{I|L}NNV 4.3817;4.256;3.953;3.953;3.7758;3.7052;3.65;3.5794;3.4549;3.347 +;-;-;-;-;-;-;-;-;- + 646 1 1.035 46807.4 1.0 8815 4829 13641 HBL1_DMSO_200M_050219_2,13646 HBL1_DMSO_200M_050219_2,13646,VPPEILNNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13647 72.249 54.0 738780.0 25 0 147630.0 + 42327 VSYLRRLDR 9 64 589.3429844827069 1176.6714160322138 2 589.3431884646416 MULTI CID FTMS 0 0 0 13641 858885.75 0.8135783834064767 -3 0.3525314331054687 6 Unmodified _VSYLRRLDR_ REV__ENSG00000196557|ENST00000348261|CACNA1H;REV__nc|ENSG00000196557|O95180-2|CACNA1H 1.844237919475145 0.850302753031785 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.035 38159.1 1.0 8816 4829 13641 HBL1_DMSO_200M_050219_2,13647 HBL1_DMSO_200M_050219_2,13647,VSYLRRLDR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13648 72.251 58.0 913900.0 25 0 103290.0 + -1 GSYPEFVRV 9 82 526.7707054986234 1051.5268580640468 2 527.7716552615166 MULTI CID FTMS 0 0 0 13641 766119.3125 1.0 0 0.0 7 Oxidation (M) _PFWM(Oxidation (M))VLML_ nc|ENSG00000170468|Q9H6W3-2|RIOX1;ENSG00000170468|ENST00000304061|RIOX1 17.086550045450526 0.6584923310065985 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}RP 6 -1 25.15 0.0 0.0 2.3918 0.0 0.0 0.0 273.14277944976044 273.14277944976044 5.764837301042714 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}RP 2.3918 - 89 1 1.035 49682.9 1.0 8817 4829 13641 HBL1_DMSO_200M_050219_2,13648 HBL1_DMSO_200M_050219_2,13648,PFWMVLML False False GSYPEFVRV 72.250505 527.771655261517 11428093.0 13641.0 nc|ENSG00000170468|Q9H6W3-2|RIOX1;;ENSG00000170468|ENST00000304061|RIOX1 5.376730442047119 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13649 72.252 59.0 1143400.0 25 0 135480.0 + 23505 LTKGAQSVKL 10 98 522.8236870756172 1043.6328212180342 2 522.8253051638603 MULTI CID FTMS 0 0 0 13641 456823.59375 0.8634469230482988 -1 0.1186370849609375 8 Unmodified _LTKGAQSVKL_ REV__ENSG00000117984|ENST00000236671|CTSD 27.628801355627647 0.3479284626772844 4 SHK{I|L}TV{I|L}K 8 -1 44.899 0.0 0.0 4.3022 0.0 0.0 119.074022361525 0.0 119.074022361525 0.0 26.36970876646094 0.0 0.0 0 0.9489700043360187 0.0 0.7614393726401688 0.0 SHK{I|L}TV{I|L}K 4.3022 - 439 1 1.035 60441.6 1.0 8818 4829 13641 HBL1_DMSO_200M_050219_2,13649 HBL1_DMSO_200M_050219_2,13649,LTKGAQSVKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13650 72.262 576.0 285620.0 25 0 11166.0 -1 QSMCGFLMVV 10 189 594.264791662238 1186.515030391276 2 594.2647582888603 MULTI CID FTMS 0 0 0 13641 303851.8125 0.4665636795739302 2 -0.234375 9 Carbamidomethyl (C),Oxidation (M) _QSMC(Carbamidomethyl (C))GFLM(Oxidation (M))VV_ nc|ENSG00000260811|A6NMZ5|OR4C45 17.11289562659939 0.5604042439455784 4 NVVV 4 -1 34.998 0.0 0.0 2.9496 0.0 0.0 757.2558137935223 0.0 757.2558137935223 0.0 11.021825181113629 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.6549471895720985 NVVV 2.9496 - 1570 1 1.035 130278.4 1.0 8819 4829 13641 HBL1_DMSO_200M_050219_2,13650 HBL1_DMSO_200M_050219_2,13650,QSMCGFLMVV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13651 72.275 728.0 271120.0 25 0 26308.0 + 12480 GVAPGFQVV 9 198 437.2454390137486 872.4763250942972 2 437.2451965212822 MULTI CID FTMS 0 0 0 13641 287911.25 1.0 0 0.0 10 Unmodified _GVAPGFQVV_ ENSG00000165724|ENST00000298585|ZMYND19 34.18733598223924 0.1073653526364521 4 [VG]AVCVAGVV 10 5 + 49.319 0.0 0.0 5.6528 5.6528 76.248 0.0 0.0 0.0 15.695990759876103 5.764837301042718 5.764837301042718 3.0102999566398125 0 0.4247425010840047 2.0 0.0 0.0 [VG]AVCVAGVV;[VG]AVCAVGVV;[VG]AVCVQVV;[VG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}VAGVV;[VG]AVCG{I|L}GVV;[VG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}VQVV;[VG]{[ES]|[DT]|[{I|L}C]}GVAGVV;[VG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}AVGVV;[VG][QP]{M(Oxidation (M))|F}AGVV;[VG]{[ES]|[DT]|[{I|L}C]}RAGVV 5.6528;5.3078;5.2491;4.8697;4.5066;4.4722;4.4248;4.1937;4.0877;4.0262 -;-;-;-;-;-;-;-;-;- 1104 1 1.035 152710.6 1.0 8820 4829 13641 HBL1_DMSO_200M_050219_2,13651 HBL1_DMSO_200M_050219_2,13651,GVAPGFQVV True True GVAPGFQVV 72.274701 437.245196521282 2516539.0 13641.0 ENSG00000165724|ENST00000298585|ZMYND19 5.303219318389893 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13652 72.28 292.0 358260.0 25 0 45739.0 + 13651 HPVILASI 8 126 425.2640188255927 0 425.2643005251884 PEAK CID FTMS 0 0 0 13641 257209.3125 0.8328250125014343 -1 0.1186370849609375 11 Unmodified _HPVILASI_ ENSG00000175390|ENST00000651655|EIF3F;ENST00000528653.1_1_11:8009127-8013479:+|nuORF 56.04830969593885 0.0716940355319963 4 SA{I|L}{I|L}{M(Oxidation (M))|F}T 6 6 43.443 0.0 0.0 5.1199 0.0 0.0 131.09723823536666 82.06698785953358 213.16422609490024 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 2.211317948139961 0.0 SA{I|L}{I|L}{M(Oxidation (M))|F}T 5.1199 - 149 + 1 1.035 88289.4 1.0 8821 4829 13641 HBL1_DMSO_200M_050219_2,13652 HBL1_DMSO_200M_050219_2,13652,HPVILASI True True HPVILASI 72.280043 425.264300525188 2444344.75 13641.0 ENST00000528653.1_1_11:8009127-8013479:+|nuORF;;ENSG00000175390|ENST00000651655|EIF3F 4.15852936108907 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13653 72.291 643.0 340830.0 25 0 40289.0 -1 0 167 652.9819647674999 1955.9240649027 3 653.3172485232353 MULTI CID FTMS 0 0 0 13641 252506.046875 1.0 0 0.0 12 4 {[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}WQ[HM]E{I|L}{I|L}P{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 15 -1 + 68.115 0.0 0.0 3.4825 3.4825 63.196 0.0 0.0 0.0 1.3676130813520189 2.046797573964156 1.3676130813520189 0.4845500650402812 0 1.1549471895720984 1.3010299956639813 0.1462566630072955 2.1791746928241125 {[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}WQ[HM]E{I|L}{I|L}P{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}WQ[HM]{I|L}E{I|L}P{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}S[DP]Q[HM]E{I|L}{I|L}P{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}S[DP]Q[HM]{I|L}E{I|L}P{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}WQ[HM]QN{I|L}P{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}WQ[HM]KN{I|L}P{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}WQ[HM]{I|L}P{I|L}E{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}S[DP]Q[HM]QN{I|L}P{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}S[DP]Q[HM]{I|L}P{I|L}E{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}S[DP]Q[HM]E{I|L}P{I|L}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.4825;3.4577;3.4126;3.3878;3.2565;3.2565;3.2507;3.1866;3.1808;3.1439 -;-;-;-;-;-;-;-;-;- 12532 1 1.035 163336.4 1.0 8822 4829 13641 HBL1_DMSO_200M_050219_2,13653 HBL1_DMSO_200M_050219_2,13653, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13654 72.304 707.0 275380.0 25 0 22510.0 -1 0 128 984.9452234514644 1967.8758939697288 2 984.9442626833916 MULTI CID FTMS 0 0 0 13641 216839.921875 0.7795095462677808 -1 0.1186370849609375 13 4 [YQ]K{I|L}GNYV 8 -1 29.364 0.0 0.0 1.4921 0.0 0.0 0.0 999.3169699797476 999.3169699797476 1.0519163974613832 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 [YQ]K{I|L}GNYV 1.4921 - 7039 1 1.035 127991.9 1.0 8823 4829 13641 HBL1_DMSO_200M_050219_2,13654 HBL1_DMSO_200M_050219_2,13654, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13655 72.316 737.0 172000.0 25 0 13668.0 -1 0 96 729.579183546682 3642.8595354004096 5 730.1811401247978 MULTI CID FTMS 0 0 0 13641 183274.90625 1.0 0 0.0 14 4 Q{I|L}{I|L}T 4 -1 26.938 0.0 0.0 0.73948 0.0 0.0 801.3682396429552 2383.240418824219 3184.6086584671743 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 Q{I|L}{I|L}T 0.73948 - 242 + 1 1.035 93966.6 1.0 8824 4829 13641 HBL1_DMSO_200M_050219_2,13655 HBL1_DMSO_200M_050219_2,13655, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13656 72.332 800.0 343660.0 25 0 29265.0 + 43811 YFASTECMLS 10 258 576.2416965546824 1150.4688401761648 2 576.2414428591728 MULTI CID FTMS 0 0 0 13641 166391.28125 1.0 0 0.0 15 Unmodified _YFASTECMLS_ REV__ENSG00000101337|ENST00000398022|TM9SF4 7.289230182591677 0.6929195370588109 4 {I|L} 1 -1 10.969 0.0 0.0 0.95345 0.0 0.0 1019.3737759445228 0.0 1019.3737759445228 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.95345 + + 883 + 1 1.035 203762.6 0.9700000286102296 8825 4829 13641 HBL1_DMSO_200M_050219_2,13656 HBL1_DMSO_200M_050219_2,13656,YFASTECMLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13657 72.345 800.0 194400.0 25 0 9181.7 + -1 SQIIKCCRC 9 217 584.2768893492159 1166.5392257652318 2 584.7733642458916 MULTI CID FTMS 0 0 0 13641 146809.640625 0.96887305783365 2 -0.234375 16 2 Carbamidomethyl (C) _SQIIKCC(Carbamidomethyl (C))RC(Carbamidomethyl (C))_ REV__ENSG00000154274|ENST00000381980|C4orf19 13.042465956692816 0.4836390050082244 4 {[QS]|[NT]}QK{[NV]|[RG]}G{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 10 -1 + 29.473 0.0 0.0 2.5265 2.5265 67.095 0.0 0.0 0.0 12.692869437192911 16.708850196920046 12.692869437192911 3.5218251811136234 0 0.5 0.3665315444204134 0.0968040358200661 0.2215141619232908 {[QS]|[NT]}QK{[NV]|[RG]}G{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}QK{I|L}[RN]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}QK[RN]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}{I|L}VQVS{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}[AG]K{[NV]|[RG]}G{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}[AG]K{I|L}[RN]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}[AG]K[RN]{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}{I|L}V[AG]VS{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{M(Oxidation (M))|F}V]PK{[NV]|[RG]}G{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}{I|L}V[WY]WW 2.5265;2.2246;2.2246;2.0256;1.7409;1.4353;1.4353;1.24;1.1772;1.0022 -;-;-;-;-;-;-;-;-;- 4728 1 1.035 120263.2 0.9100000262260436 8826 4829 13641 HBL1_DMSO_200M_050219_2,13657 HBL1_DMSO_200M_050219_2,13657,SQIIKCCRC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13658 72.36 800.0 229620.0 25 0 11868.0 19727 LGPFPTEDEV 10 217 368.5117974515439 1102.5135629548315 3 368.5114623904228 MULTI CID FTMS 0 0 0 13641 139169.171875 0.5651918323212626 1 -0.1647796630859375 17 Unmodified _LGPFPTEDEV_ ENSG00000198754|ENST00000327582|OXCT2;ENST00000447263.1_1_1:39980824-39982159:+|nuORF 16.565877749689598 0.5695826726197942 4 {[VA]|[{I|L}G]}PDE{I|L} 6 5 53.703 0.0 0.0 4.871 0.0 0.0 0.0 475.17868982486567 475.17868982486567 33.86832504786588 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.805462187404089 0.0 {[VA]|[{I|L}G]}PDE{I|L} 4.871 - 390 + 1 1.035 151707.1 0.6499999761581421 8827 4829 13641 HBL1_DMSO_200M_050219_2,13658 HBL1_DMSO_200M_050219_2,13658,LGPFPTEDEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13659 72.374 800.0 122380.0 25 0 53592.0 -1 0 57 1116.4603702367442 0 1116.459399402142 PEAK CID FTMS 0 0 0 13641 136120.96875 1.0 0 0.0 18 4 Q 1 -1 11.237 0.0 0.0 0.5037 0.0 0.0 1115.4024293141945 984.435678350256 2099.8381076644505 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 Q 0.5037 - 56 + 1 1.035 78610.8 0.699999988079071 8828 4829 13641 HBL1_DMSO_200M_050219_2,13659 HBL1_DMSO_200M_050219_2,13659, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13660 72.388 800.0 307790.0 25 0 31395.0 + 39977 VGASLRPR 8 201 428.26170747282816 854.5088620124563 2 428.2627746462822 MULTI CID FTMS 0 0 0 13641 125857.109375 0.0179597184735915 12 -1.2578048706054688 19 Unmodified _VGASLRPR_ REV__ENSG00000119771|ENST00000486442|KLHL29;REV__ENST00000471654.1_1_2:23914526-23929531:+|nuORF;REV__nc|ENSG00000119771|Q96CT2-2|KLHL29 2.577480529830294 0.808687252328423 4 {I|L} 1 -1 11.259 0.0 0.0 1.3176 0.0 0.0 723.4137062280798 0.0 723.4137062280798 0.0 1.2590598649689966 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3176 + + 74 + 1 1.035 192044.0 0.6499999761581421 8829 4829 13641 HBL1_DMSO_200M_050219_2,13660 HBL1_DMSO_200M_050219_2,13660,VGASLRPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13661 72.403 800.0 268230.0 25 0 35846.0 + 37739 VPYPTASLV 9 208 473.28470720485615 944.5548614765124 2 473.2843200564384 MULTI CID FTMS 0 0 0 13641 119443.53125 1.0 0 0.0 20 Unmodified _TLQVVVSSL_ ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1;nc|ENSG00000078674|Q15154-3|PCM1;nc|ENSG00000078674|Q15154-2|PCM1 26.88365393820708 0.1891292719743517 4 {[TV]|[{I|L}S]}S{[QG]|[NA]}GVS 8 6 30.896 0.0 0.0 3.2709 0.0 0.0 0.0 226.17415612984053 226.17415612984053 4.610403483680656 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.3807196863200843 0.0 {[TV]|[{I|L}S]}S{[QG]|[NA]}GVS 3.2709 - 2511 1 1.035 163566.9 0.7099999785423279 8830 4829 13641 HBL1_DMSO_200M_050219_2,13661 HBL1_DMSO_200M_050219_2,13661,TLQVVVSSL False True VPYPTASLV 72.403138 473.284320056438 10589058.0 13641.0 ENSG00000078674|ENST00000325083|PCM1;;nc|ENSG00000078674|Q15154-4|PCM1;;nc|ENSG00000078674|Q15154-5|PCM1;;nc|ENSG00000078674|Q15154-3|PCM1;;nc|ENSG00000078674|Q15154-2|PCM1 5.11870272954305 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13663 72.408 18.0 3872700.0 25 0 1096700.0 -1 0 31 1162.7987859000227 3485.374528300268 3 1163.463427722454 MULTI CID FTMS 0 0 0 13662 5702307.5 0.0419159299994966 4 -0.4035415649414062 1 4 E 1 -1 6.9897 0.0 0.0 0.20054 0.0 0.0 2829.147078033014 524.1635836236936 3353.310661656708 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20054 - 14 + 1 1.035 67216.8 1.0 8831 4830 13662 HBL1_DMSO_200M_050219_2,13663 HBL1_DMSO_200M_050219_2,13663, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13664 72.409 5.2 9016500.0 25 0 1436100.0 + 3100 AVPDEIPPLE 10 73 540.2849079987573 1078.5552630643144 2 540.2852661013603 MULTI CID FTMS 0 0 0 13662 9327823.0 0.3103651757808887 3 -0.2725296020507812 2 Unmodified _AVPDEIPPLE_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 23.80106514851385 0.4339316747945569 4 [DP]E{I|L}AVPP{I|L}E 10 4 [DP]E{I|L}AV + + 34.271 23.02 3.6873 3.1775 3.1775 46.315 0.0 0.0 0.0 0.0 -1.8753063169585005 -1.8753063169585005 0.0 0 0.7614393726401688 0.0 0.25 0.0 [DP]E{I|L}AVPP{I|L}E 3.1775 - 184 + 1 1.035 46051.4 1.0 8832 4830 13662 HBL1_DMSO_200M_050219_2,13664 HBL1_DMSO_200M_050219_2,13664,AVPDEIPPLE False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13665 72.41 24.0 3383300.0 25 0 401590.0 + 9608 FLLDKKIGV 9 71 516.8259519873302 1031.6373510414603 2 516.8265258669853 MULTI CID FTMS 0 0 0 13662 2322759.25 0.9491596328745662 -1 0.1647796630859375 3 Unmodified _FLLDKKIGV_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 41.8396318013385 0.0653578398400075 4 {M(Oxidation (M))|F}{I|L}{I|L}DK[K{I|L}]GV 9 0 + 56.297 0.0 0.0 5.457 5.457 88.749 0.0 0.0 0.0 18.672838183789736 2.8533500713746207 2.8533500713746207 56.29670030985565 0 0.7742275032520141 0.0 0.7742275032520141 0.0 + + {M(Oxidation (M))|F}{I|L}{I|L}DK[K{I|L}]GV 5.457 + + 458 + 1 1.035 64469.2 1.0 8833 4830 13662 HBL1_DMSO_200M_050219_2,13665 HBL1_DMSO_200M_050219_2,13665,FLLDKKIGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13666 72.411 28.0 1918100.0 25 0 116790.0 + 16939 KILPDLNTV 9 88 506.8057701348955 1011.596987336591 2 506.8058959841728 MULTI CID FTMS 0 0 0 13662 2326376.25 0.8194981720150001 1 -0.0695953369140625 4 Unmodified _KILPDLNTV_ ENSG00000142207|ENST00000382751|URB1 45.69961567697781 0.0497987121815769 4 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}K{I|L}NTV 9 4 + 37.33 0.0 0.0 3.6902 3.6902 66.765 0.0 0.0 0.0 1.978376791084493 9.137342758552698 1.978376791084493 1.978376791084493 0 0.6237125054200234 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}K{I|L}NTV;[K{I|L}]{I|L}[DP]{I|L}NTV;[{I|L}P]D{I|L}K{I|L}NTV;[DP]{I|L}{I|L}K{I|L}NTV;{NN|[MP]|[D{I|L}]|[EV]}P{I|L}K{I|L}GGTV;[K{I|L}]{I|L}[DP]{I|L}GGTV;[{I|L}P]D{I|L}K{I|L}GGTV;{NN|[MP]|[D{I|L}]|[EV]}PN{I|L}[K{I|L}]TV;[DP]{I|L}{I|L}K{I|L}GGTV;[{I|L}P]DN{I|L}[K{I|L}]TV 3.6902;3.4946;3.3388;2.9992;2.7799;2.5843;2.4286;2.3535;2.0889;2.0022 -;+;-;-;-;-;-;-;-;- + 266 1 1.035 47038.6 1.0 8834 4830 13662 HBL1_DMSO_200M_050219_2,13666 HBL1_DMSO_200M_050219_2,13666,KILPDLNTV True True KILPDLNTV 72.411058 506.805895984173 50370916.0 13662.0 ENSG00000142207|ENST00000382751|URB1 7.25186824798584 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13667 72.416 238.0 980050.0 25 0 237400.0 -1 0 58 1172.4573120249847 3514.350106675154 3 1172.793749988079 MULTI CID FTMS 0 0 0 13662 1669634.625 0.7428354360658568 2 -0.173797607421875 5 4 QTT 3 -1 10.974 0.0 0.0 0.31227 0.0 0.0 2065.7076028683173 1115.4800158209346 3181.187618689252 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 QTT 0.31227 - 38 + 1 1.035 190627.3 1.0 8835 4830 13662 HBL1_DMSO_200M_050219_2,13667 HBL1_DMSO_200M_050219_2,13667, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13668 72.417 29.0 1575800.0 25 0 141310.0 + 28944 QAYEALTQI 9 93 518.769831566843 1035.525110200486 2 518.7703735232353 MULTI CID FTMS 0 0 0 13662 1362594.875 0.3471688978199566 1 -0.0695953369140625 6 Unmodified _QAYEALTQI_ ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160 32.30548876998284 0.1201446275138228 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EAQ{I|L}[WR] 8 5 + 47.501 0.0 0.0 4.5872 4.5872 78.294 0.0 0.0 0.0 5.8534811358448735 26.610688275226053 5.8534811358448735 8.538719643217618 0 0.0 1.2218487496163564 1.2302046884880935 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EAQ{I|L}[WR];[YE]AAQ{I|L}[WR];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EA[AG]{I|L}[WR];[YE]AA[AG]{I|L}[WR];[AG]T[W{M(Oxidation (M))|F}]{I|L}[WR];[QT][W{M(Oxidation (M))|F}]{I|L}[WR];[YE][RN]{I|L}[WR];[AG]A{[CP]|[EA]}Y{I|L}[WR];[QA]{[CP]|[EA]}Y{I|L}[WR];[YG][DV]Q{I|L}[WR] 4.5872;3.7626;3.3251;2.5005;2.0318;1.7455;1.5466;1.3228;1.2713;1.2599 -;-;-;-;-;-;-;-;-;- 370 1 1.035 39436.3 1.0 8836 4830 13662 HBL1_DMSO_200M_050219_2,13668 HBL1_DMSO_200M_050219_2,13668,QAYEALTQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13669 72.418 27.0 2006400.0 25 0 195680.0 + + 33222 AYLEAYKEF 9 84 567.3299654973393 1132.6453780614786 2 567.3303710818291 MULTI CID FTMS 0 0 0 13662 1263741.125 0.3338342643555355 -7 0.8545913696289062 7 Unmodified _SFLTPQTVLK_ ENSG00000139163|ENST00000266517|ETNK1;nc|ENSG00000139163|Q9HBU6|ETNK1 6.2057823575117 0.6979311171683138 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}THAE{I|L} 8 -1 44.078 0.0 0.0 3.8916 0.0 0.0 0.0 231.1755653996224 231.1755653996224 19.195925227640984 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}THAE{I|L} 3.8916 - 410 1 1.035 44491.0 1.0 8837 4830 13662 HBL1_DMSO_200M_050219_2,13669 HBL1_DMSO_200M_050219_2,13669,SFLTPQTVLK False False AYLEAYKEF 72.417913 567.330371081829 9350556.0 13662.0 ENSG00000139163|ENST00000266517|ETNK1;;nc|ENSG00000139163|Q9HBU6|ETNK1 6.742640495300293 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13670 72.42 70.0 1240300.0 25 0 184060.0 + 15445 IPPVAVRL 8 67 432.7870939984427 863.5596350636854 2 432.7869445681572 MULTI CID FTMS 0 0 0 13662 996453.0625 0.6481890872568495 2 -0.173797607421875 8 Unmodified _IPPVAVRL_ ENSG00000111642|ENST00000544040|CHD4;ENST00000535717.1_1_12:6679844-6680280:-|nuORF;nc|ENSG00000111642|Q14839-2|CHD4 18.13498045792455 0.6430038125133779 4 {I|L}PPV 4 4 53.175 0.0 0.0 6.1577 0.0 0.0 0.0 454.27937845404193 454.27937845404193 40.666381690025794 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}PPV 6.1577 + + 23 + 1 1.035 72176.9 1.0 8838 4830 13662 HBL1_DMSO_200M_050219_2,13670 HBL1_DMSO_200M_050219_2,13670,IPPVAVRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13671 72.421 46.0 1230600.0 25 0 198750.0 + 18344 KVLEYVIKV 9 89 545.8471048635333 1089.6796567938666 2 545.8472778201103 MULTI CID FTMS 0 0 0 13662 911620.0 0.0639939910427225 3 -0.2725296020507812 9 Unmodified _KVLEYVIKV_ ENSG00000198681|ENST00000356661|MAGEA1 26.020703789607367 0.2001090068861241 4 KV{I|L} 3 6 36.24 0.0 0.0 3.3257 0.0 0.0 0.0 746.4116915338499 746.4116915338499 10.055367168216035 0.0 0.0 0.0 0 0.6861818737241735 0.7695510786217261 0.0 0.0 + KV{I|L} 3.3257 + + 231 + 1 1.035 49204.5 1.0 8839 4830 13662 HBL1_DMSO_200M_050219_2,13671 HBL1_DMSO_200M_050219_2,13671,KVLEYVIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13672 72.422 41.0 1099300.0 25 0 80156.0 + 16343 IYLPAAQTM 9 86 504.2649122637417 1006.5152715942834 2 504.2647888064384 MULTI CID FTMS 0 0 0 13662 633173.75 0.4233369133819073 1 -0.0695953369140625 10 Unmodified _IYLPAAQTM_ ENSG00000198836|ENST00000361510|OPA1;nc|ENSG00000198836|O60313-11|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313|OPA1 16.942295170755138 0.3780752226737986 4 TM 2 7 18.583 0.0 0.0 1.8463 0.0 0.0 756.4162902258065 0.0 756.4162902258065 0.0 0.5115252244738144 0.0 0.0 0 0.0 0.0 0.0 0.0 + TM 1.8463 + + 243 + 1 1.035 40777.7 1.0 8840 4830 13662 HBL1_DMSO_200M_050219_2,13672 HBL1_DMSO_200M_050219_2,13672,IYLPAAQTM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13673 72.424 63.0 679290.0 25 0 58598.0 + 10705 FVYITDNAY 9 80 553.2650298764737 1104.515506819747 2 553.2644531130791 MULTI CID FTMS 0 0 0 13662 634327.6875 0.7019862643895439 1 -0.0695953369140625 11 Unmodified _FVYITDNAY_ ENSG00000157456|ENST00000288207|CCNB2 14.581692164780916 0.4419739649577144 4 Y 1 8 15.485 0.0 0.0 1.4019 0.0 0.0 923.4411182472847 0.0 923.4411182472847 0.0 4.888618026444238 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.4019 + + 28 + 1 1.035 39214.1 1.0 8841 4830 13662 HBL1_DMSO_200M_050219_2,13673 HBL1_DMSO_200M_050219_2,13673,FVYITDNAY False True FVYITDNAY 72.423571 553.264453113079 7756373.0 13662.0 ENSG00000157456|ENST00000288207|CCNB2 5.466691970825195 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13674 72.426 99.0 657220.0 25 0 101330.0 + 22652 LPYQPPAL 8 89 449.7555090787788 897.4964652243576 2 449.7558471560478 MULTI CID FTMS 0 0 0 13662 608166.875 0.4530871924655437 1 -0.0695953369140625 12 Unmodified _LPYQPPAL_ ENSG00000165684|ENST00000684778|SNAPC4 45.7499826716795 0.1592378023510922 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}P 5 4 38.2 0.0 0.0 4.2563 0.0 0.0 0.0 296.16259155314225 296.16259155314225 17.56498736291583 0.0 0.0 0.0 0 0.7742275032520141 1.3010299956639813 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}P 4.2563 - 298 1 1.035 58100.5 1.0 8842 4830 13662 HBL1_DMSO_200M_050219_2,13674 HBL1_DMSO_200M_050219_2,13674,LPYQPPAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13675 72.427 58.0 1054300.0 25 0 85746.0 + 17395 KMLEKLPEL 9 82 550.8227663194173 1099.6309797056344 2 550.8230468630791 MULTI CID FTMS 0 0 0 13662 580008.0 0.79665792873169 1 -0.0695953369140625 13 Unmodified _KMLEKLPEL_ ENSG00000161204|ENST00000429586|ABCF3;ENST00000468892.5_1_3:183907488-183910505:+|nuORF;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;nc|ENSG00000161204|Q9NUQ8-2|ABCF3 43.9818466556824 0.0535980856389242 4 {[VA]|[{I|L}G]}S{I|L}{I|L}M{I|L}{I|L}M 9 7 53.858 0.0 0.0 4.8978 0.0 0.0 0.0 125.07260503205944 125.07260503205944 15.648101958286048 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.2561420478726844 0.0 {[VA]|[{I|L}G]}S{I|L}{I|L}M{I|L}{I|L}M 4.8978 - 696 1 1.035 53388.6 1.0 8843 4830 13662 HBL1_DMSO_200M_050219_2,13675 HBL1_DMSO_200M_050219_2,13675,KMLEKLPEL True True KMLEKLPEL 72.427165 550.823046863079 11303666.0 13662.0 ENST00000468892.5_1_3:183907488-183910505:+|nuORF;;ENSG00000161204|ENST00000429586|ABCF3;;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;;nc|ENSG00000161204|Q9NUQ8-2|ABCF3 1.6293571690718334 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13676 72.43 169.0 832710.0 25 0 160280.0 + 18409 KVVEDGILKL 10 128 557.3477478994736 1112.680942865747 2 557.3476440310478 MULTI CID FTMS 0 0 0 13662 560287.6875 0.2545747966775964 -2 0.283416748046875 14 Unmodified _KVVEDGILKL_ ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1 125.18120922955336 0.0002206433355738 4 KVVEDG{I|L}{I|L}K{I|L} 10 0 + 97.337 0.0 0.0 8.748 8.748 81.377 0.0 0.0 0.0 23.521825181113627 1.1394335230683763 1.1394335230683763 1.1394335230683763 0 3.385151878060192 0.6989700043360187 0.2887254899964357 0.2742275032520141 + + KVVEDG{I|L}{I|L}K{I|L};KVVEDG{I|L}{I|L}{I|L}K;{I|L}[WR]{[RE]|[WV]}{I|L}K{I|L};{I|L}[WR]{[RE]|[WV]}{I|L}{I|L}K 8.748;8.6456;3.1619;3.0595 +;-;-;- + 3586 + 1 1.035 110320.0 1.0 8844 4830 13662 HBL1_DMSO_200M_050219_2,13676 HBL1_DMSO_200M_050219_2,13676,KVVEDGILKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13677 72.433 126.0 484910.0 25 0 73086.0 + + 8181 DAWVYKRLV 9 105 575.8430692907657 1149.6715856483313 2 575.8441039919853 MULTI CID FTMS 0 0 0 13662 538902.3125 0.3680309014191563 -6 0.6706390380859375 15 Unmodified _EPRRRVLGAP_ nc|ENSG00000165304|Q14680-2|MELK;nc|ENSG00000165304|Q14680-3|MELK;nc|ENSG00000165304|Q14680-5|MELK;nc|ENSG00000165304|Q14680-4|MELK;ENSG00000165304|ENST00000298048|MELK;nc|ENSG00000165304|Q14680-7|MELK;nc|ENSG00000165304|Q14680-6|MELK;nc|ENSG00000165304|Q14680-8|MELK 1.6526216038709556 0.7189921496796233 4 {I|L} 1 -1 10.089 0.0 0.0 0.87752 0.0 0.0 1018.5766282282126 0.0 1018.5766282282126 0.0 -0.0924170284700665 -0.0924170284700665 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.87752 + + 32 + 1 1.035 50410.9 1.0 8845 4830 13662 HBL1_DMSO_200M_050219_2,13677 HBL1_DMSO_200M_050219_2,13677,EPRRRVLGAP False False DAWVYKRLV 72.433077 575.844103991985 388370.25 13662.0 nc|ENSG00000165304|Q14680-2|MELK;;nc|ENSG00000165304|Q14680-3|MELK;;nc|ENSG00000165304|Q14680-5|MELK;;nc|ENSG00000165304|Q14680-4|MELK;;ENSG00000165304|ENST00000298048|MELK;;nc|ENSG00000165304|Q14680-7|MELK;;nc|ENSG00000165304|Q14680-6|MELK;;nc|ENSG00000165304|Q14680-8|MELK 1.58827938636144 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13678 72.436 123.0 493080.0 25 0 48261.0 + 17835 KQLDDLKVEL 10 101 600.8453419844042 1199.6761310356085 2 600.8453857302666 MULTI CID FTMS 0 0 0 13662 438429.8125 0.0016314348304113 15 -1.49871826171875 16 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 59.05245873256422 0.0390717477387156 4 {[TV]|[{I|L}S]}VAND{I|L}KVE{I|L} 11 5 + 57.076 0.0 0.0 4.7576 4.7576 66.775 0.0 0.0 0.0 0.0313857421417296 4.656144957418356 0.0313857421417296 0.0313857421417296 0 1.0682503180159344 0.0 1.274227503252014 0.3252574989159953 {[TV]|[{I|L}S]}VAND{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}KND{I|L}KVE{I|L};{[TV]|[{I|L}S]}VAND{I|L}VKE{I|L};{[QN]|[E{I|L}]|[KN]}KND{I|L}VKE{I|L};{[TV]|[{I|L}S]}G{I|L}ND{I|L}KVE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}ND{I|L}KVE{I|L};{[TV]|[{I|L}S]}G{I|L}ND{I|L}VKE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}ND{I|L}VKE{I|L};[KQ]{I|L}DD{I|L}KVE{I|L};[{I|L}A][VS]ND{I|L}KVE{I|L} 4.7576;4.755;4.6098;4.6072;4.5099;4.4636;4.3621;4.3158;4.2084;4.1526 -;-;-;-;-;-;-;-;+;- + 2418 1 1.035 47705.2 1.0 8846 4830 13662 HBL1_DMSO_200M_050219_2,13678 HBL1_DMSO_200M_050219_2,13678,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13679 72.445 511.0 296810.0 25 0 36774.0 7659 EKIQALPTVPV 11 160 597.8561447370602 1193.6977365409202 2 597.8561889529228 MULTI CID FTMS 0 0 0 13662 422164.5 1.0 0 0.0 17 Unmodified _EKIQALPTVPV_ ENSG00000070423|ENST00000292363|RNF126 4.897010918128616 0.8520435188433833 4 {M(Oxidation (M))|F} 1 11 10.713 0.0 0.0 0.89749 0.0 0.0 1028.6180226510749 0.0 1028.6180226510749 0.0 -0.9691001300805624 -0.9691001300805624 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.89749 - 145 + 1 1.035 113171.4 1.0 8847 4830 13662 HBL1_DMSO_200M_050219_2,13679 HBL1_DMSO_200M_050219_2,13679,EKIQALPTVPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13680 72.449 204.0 808680.0 25 0 84749.0 + 32906 SEIPKLPAV 9 124 477.287597374354 952.560641815508 2 477.2872802615166 MULTI CID FTMS 0 0 0 13662 417809.65625 0.4844240835989049 -4 0.5173110961914062 18 Unmodified _SEIPKLPAV_ ENSG00000131400|ENST00000253719|NAPSA;ENST00000598044.1_1_19:50861812-50862477:-|nuORF 37.97399986684836 0.0865783450051559 4 {[ES]|[DT]|[{I|L}C]}{I|L}PK{I|L}PAV 9 0 + 37.316 0.0 0.0 3.9175 3.9175 64.933 0.0 0.0 0.0 15.914210751606433 0.9293758950207548 0.9293758950207548 0.6366907986937775 0 1.2302046884880935 0.0 0.0 0.0 + + {[ES]|[DT]|[{I|L}C]}{I|L}PK{I|L}PAV;{[ES]|[DT]|[{I|L}C]}{I|L}PK{I|L}APV;{[ES]|[DT]|[{I|L}C]}{I|L}PK{I|L}PG{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}PK{I|L}{I|L}GP;{[ES]|[DT]|[{I|L}C]}{I|L}PK{I|L}AVP;[{I|L}P]KP[VS]{I|L}{[CP]|[EA]};[{I|L}P]AAVVA{I|L}{[CP]|[EA]};[PA]{I|L}AVVA{I|L}{[CP]|[EA]} 3.9175;3.8506;3.5478;3.0976;2.98;1.6117;1.1645;0.0039195 +;-;-;-;-;-;-;- + 593 + 1 1.035 131443.9 1.0 8848 4830 13662 HBL1_DMSO_200M_050219_2,13680 HBL1_DMSO_200M_050219_2,13680,SEIPKLPAV True True SEIPKLPAV 72.448523 477.287280261517 48479604.0 13662.0 ENST00000598044.1_1_19:50861812-50862477:-|nuORF;;ENSG00000131400|ENST00000253719|NAPSA;;chr19:50334405-50334743|22|113.32|0.16|9.51|-|0|NAPSB,None|1;;chr19:50334405-50334506|12|128.75|0.04|11.74|-|0|NAPSB,None|1 4.609462340672811 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13681 72.459 613.0 707420.0 25 0 26302.0 -1 0 188 857.9296164380768 1713.8446799429537 2 857.9299194216728 MULTI CID FTMS 0 0 0 13662 349004.78125 0.350889253918749 -3 0.3318328857421875 19 4 N{I|L}PN{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q 15 -1 + 165.01 0.0 0.0 9.6281 9.6281 82.667 0.0 0.0 0.0 29.03089986991944 15.202202577313784 15.202202577313784 1.4215905896025165 0 2.672167511924052 2.0 1.960409376976188 3.11626513771206 N{I|L}PN{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q;N{I|L}PN{I|L}NAD[RN]EG{M(Oxidation (M))|F}{I|L}Q;N{I|L}PN{I|L}NADQ[DN]V{M(Oxidation (M))|F}{I|L}Q;N{I|L}PN{I|L}NADQA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}Q;N{I|L}PN{I|L}NADQA{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{I|L}Q;N{I|L}PN{I|L}NADQA{[SA]|[TG]}V{M(Oxidation (M))|F}{I|L}Q;N{I|L}PN{I|L}NAD[AG]RDG{M(Oxidation (M))|F}{I|L}Q;N{I|L}PN{I|L}GGADQRDG{M(Oxidation (M))|F}{I|L}Q;N{I|L}PGG{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q;N{I|L}PGG{I|L}NAD[RN]EG{M(Oxidation (M))|F}{I|L}Q 9.6281;9.5451;9.4837;9.2839;9.2701;9.2675;9.1011;9.1011;9.1011;9.0182 -;-;-;-;-;-;-;-;-;- 750000 + 1 1.035 280888.2 1.0 8849 4830 13662 HBL1_DMSO_200M_050219_2,13681 HBL1_DMSO_200M_050219_2,13681, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13682 72.473 781.0 445420.0 25 0 58999.0 + 9609 FLLDKKIGV 9 235 344.88655244321217 1031.6378279298365 3 344.8865539431572 MULTI CID FTMS 0 0 0 13662 311688.375 1.0 0 0.0 20 Unmodified _FLLDKKIGV_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 43.85829265575387 0.0542763391141878 4 {M(Oxidation (M))|F}{I|L}{I|L}DK[K{I|L}]GV 9 0 + 47.207 0.0 0.0 4.5759 4.5759 71.08 0.0 0.0 0.0 30.48951793423994 0.8265059764113403 0.8265059764113403 2.7620641193894926 0 0.2742275032520141 0.0 0.3494850021680094 0.2887254899964357 + + {M(Oxidation (M))|F}{I|L}{I|L}DK[K{I|L}]GV;{M(Oxidation (M))|F}{I|L}{I|L}DK[K{I|L}]VG;{M(Oxidation (M))|F}{I|L}VEK[K{I|L}]GV;{M(Oxidation (M))|F}{I|L}VEK[K{I|L}]VG;{M(Oxidation (M))|F}V{I|L}EK[K{I|L}]GV;{M(Oxidation (M))|F}V{I|L}EK[K{I|L}]VG;{M(Oxidation (M))|F}{I|L}{I|L}DV{I|L}{I|L}S{I|L};{M(Oxidation (M))|F}{I|L}{I|L}[WK]{[NV]|[RG]}{I|L};{M(Oxidation (M))|F}{I|L}{I|L}QRRS{I|L};{M(Oxidation (M))|F}{I|L}{I|L}DV{I|L}{I|L}TV 4.5759;4.3081;4.2841;4.0163;3.5558;3.288;2.8655;2.7285;2.6634;2.6181 +;-;-;-;-;-;-;-;-;- + 1024 + 1 1.035 283409.7 1.0 8850 4830 13662 HBL1_DMSO_200M_050219_2,13682 HBL1_DMSO_200M_050219_2,13682,FLLDKKIGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13684 72.477 14.0 3311300.0 25 0 868730.0 + 36676 TAYPQVVVV 9 60 488.27941093069165 974.5442689281832 2 488.2793762087822 MULTI CID FTMS 0 0 0 13683 3606479.75 0.6454291716474517 -1 0.0695953369140625 1 Unmodified _TAYPQVVVV_ ENSG00000166532|ENST00000535829|RIMKLB;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;nc|ENSG00000166532|Q9ULI2-2|RIMKLB 25.399314129420983 0.2080152500878129 4 [QP]VVY 5 5 32.479 0.0 0.0 3.3328 0.0 0.0 0.0 385.2092218913271 385.2092218913271 8.108572192907957 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.3807196863200844 [QP]VVY 3.3328 - 129 1 1.042 43202.7 1.0 8851 4831 13683 HBL1_DMSO_200M_050219_2,13684 HBL1_DMSO_200M_050219_2,13684,TAYPQVVVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13685 72.478 33.0 1737200.0 25 0 178360.0 + 45106 YPYPYPHTLY 10 70 657.3142409885264 1312.6139290438527 2 657.3141357302666 MULTI CID FTMS 0 0 0 13683 1485286.25 0.829204567143379 1 -0.1042022705078125 2 Unmodified _YPYPYPHTLY_ ENSG00000116221|ENST00000360840|MRPL37 104.79918948944588 0.0059796167826964 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPHT{I|L}Y 10 0 + 81.068 0.0 0.0 6.1761 6.1761 88.71 0.0 0.0 0.0 14.90485216277645 13.143939572219637 13.143939572219637 13.143939572219637 0 1.6989700043360187 1.6989700043360187 1.548455006504028 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPHT{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYP[KS]C[VP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}Y{M(Oxidation (M))|F}{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPY[H{I|L}][TP]Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YV[VS]Y{M(Oxidation (M))|F}{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}YE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YV[RN]PY{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YV[VS]YE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YP[KS][PG]Y{[QN]|[E{I|L}]|[KN]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}{M(Oxidation (M))|F}{I|L}Y{M(Oxidation (M))|F}{I|L}Y 6.1761;5.1747;4.7107;4.4678;4.3132;4.2754;4.1311;3.878;3.7361;3.5844 +;-;-;-;-;-;-;-;-;- + 547 + 1 1.042 49982.4 1.0 8852 4831 13683 HBL1_DMSO_200M_050219_2,13685 HBL1_DMSO_200M_050219_2,13685,YPYPYPHTLY True True YPYPYPHTLY 72.478266 657.314135730267 74665728.0 13683.0 ENSG00000116221|ENST00000360840|MRPL37 8.3831254641215 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13686 72.479 21.0 2636100.0 25 0 251230.0 + 2258 AQFHPTEDLVV 11 79 628.3200531437147 1254.6255533542294 2 628.3199951052666 MULTI CID FTMS 0 0 0 13683 2332880.5 0.574803811664372 1 -0.1042022705078125 3 Unmodified _AQFHPTEDLVV_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 21.59015148037692 0.5852593066373742 4 D{I|L}VV 4 7 43.047 0.0 0.0 3.4311 0.0 0.0 810.3617420880875 0.0 810.3617420880875 0.0 18.68894395854837 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.0 + D{I|L}VV 3.4311 + + 198 1 1.042 50002.3 1.0 8853 4831 13683 HBL1_DMSO_200M_050219_2,13686 HBL1_DMSO_200M_050219_2,13686,AQFHPTEDLVV False True AQFHPTEDLVV 72.479446 628.319995105267 35948980.0 13683.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 4.2162394523620605 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13687 72.481 29.0 1983600.0 25 0 204760.0 + 6357 DVREIVNNI 9 89 536.2941272704401 0 536.2937499880791 PEAK CID FTMS 0 0 0 13683 1149934.5 0.1736262025620533 -2 0.234375 4 Unmodified _DVREIVNNI_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 24.99096001346401 0.1558265925128033 4 NNV{I|L}EV 6 7 29.416 0.0 0.0 2.7477 0.0 0.0 131.0973965313113 268.0942476861938 399.1916442175051 0.0 0.0 0.0 0.0 0 0.6139829889124311 0.0 0.0 0.0 NNV{I|L}EV 2.7477 - 237 + 1 1.042 50528.5 1.0 8854 4831 13683 HBL1_DMSO_200M_050219_2,13687 HBL1_DMSO_200M_050219_2,13687,DVREIVNNI False True DVREIVNNI 72.480625 536.293749988079 49806304.0 13683.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 4.397490342458089 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13688 72.482 81.0 986720.0 25 0 104220.0 21098 LPAIIKWL 8 88 477.3109315032138 952.6073100732276 2 477.3106872439384 MULTI CID FTMS 0 0 0 13683 473151.53125 0.1327459959249089 -5 0.5869064331054688 5 Unmodified _LPAIIKWL_ ENST00000225972.7_1_17:48460219-48460333:-|nuORF 26.34127834903884 0.4900704351052977 4 {I|L}P{I|L}A 4 5 52.423 0.0 0.0 5.5031 0.0 0.0 0.0 555.3280123346311 555.3280123346311 38.26940844580737 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}P{I|L}A 5.5031 - 181 + 1 1.042 67554.3 1.0 8855 4831 13683 HBL1_DMSO_200M_050219_2,13688 HBL1_DMSO_200M_050219_2,13688,LPAIIKWL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13689 72.492 523.0 519430.0 25 0 45727.0 + 12592 GVIGVGVAV 9 93 770.4773033797622 769.4700269131622 1 770.4778320193291 MULTI CID FTMS 0 0 0 13683 446263.59375 0.065840593712839 4 -0.438262939453125 6 Unmodified _GVIGVGVAV_ REV__ENST00000499732.2_1_11:65191242-65191350:+|nuORF 67.41302359171755 0.0220989861905124 4 [VG]GVG{I|L}VAV 9 -1 + 69.135 0.0 0.0 8.9847 8.9847 82.884 0.0 0.0 0.0 11.690289377098786 7.7815125038364386 7.7815125038364386 1.7609125905568137 0 0.9291746928241124 1.6989700043360187 0.0 0.0 [VG]GVG{I|L}VAV;[VG]VGG{I|L}VAV;[VG]GVAVVAV;[VG]VGAVVAV;[VG]GGV{I|L}VAV;[VG]GVGV{I|L}AV;[VG]GV{I|L}GVAV;[VG]G{I|L}GVVAV;[VG]GVG{I|L}VG{I|L};[VG]GG{I|L}VVAV 8.9847;8.7559;8.5935;8.3647;8.3647;8.0083;7.9734;7.9734;7.9734;7.9734 -;-;-;-;-;-;-;-;-;- 7288 1 1.042 188939.2 1.0 8856 4831 13683 HBL1_DMSO_200M_050219_2,13689 HBL1_DMSO_200M_050219_2,13689,GVIGVGVAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13690 72.494 101.0 592510.0 25 0 41637.0 + 23060 LSLICKICHLW 11 104 664.864887082493 1327.715221231786 2 665.3677245974541 MULTI CID FTMS 0 0 0 13683 445452.1875 0.5223130692755419 -1 0.0695953369140625 7 Unmodified _LSLICKICHLW_ ENSG00000091181|ENST00000446632|IL5RA;nc|ENSG00000091181|Q01344-5|IL5RA 17.11289562659939 0.6791789249425932 4 {[TV]|[{I|L}S]}{I|L}EQ[{I|L}P]{[ET]|[MV]}{I|L}W 11 5 + 59.274 0.0 0.0 4.4643 4.4643 74.784 0.0 0.0 0.0 40.10018818588833 1.931420782087528 1.931420782087528 5.303050948549256 0 0.7134679910804405 2.0 0.2887254899964357 0.0 {[TV]|[{I|L}S]}{I|L}EQ[{I|L}P]{[ET]|[MV]}{I|L}W;{[TV]|[{I|L}S]}{I|L}EEH{I|L}[RK]{[CT]|[{M(Oxidation (M))|F}G]};{[TV]|[{I|L}S]}{I|L}EQ[{I|L}P]{[ET]|[MV]}W{I|L};{[TV]|[{I|L}S]}{I|L}EEH{I|L}[KG]V{[CT]|[{M(Oxidation (M))|F}G]};{[TV]|[{I|L}S]}{I|L}EEH{I|L}[KG]{M(Oxidation (M))|F}GV;{[TV]|[{I|L}S]}{I|L}EQ[{I|L}P]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPV;[KA]WWH{I|L}[RK]{[CT]|[{M(Oxidation (M))|F}G]} 4.4643;4.0649;4.064;3.8442;3.7806;2.7917;0.1137 -;-;-;-;-;-;- 992 + 1 1.042 49822.2 1.0 8857 4831 13683 HBL1_DMSO_200M_050219_2,13690 HBL1_DMSO_200M_050219_2,13690,LSLICKICHLW False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13691 72.497 143.0 464890.0 25 0 49894.0 + 39386 VAIESTPMI 9 100 480.7555128327339 959.496472732268 2 480.7567626833916 MULTI CID FTMS 0 0 0 13683 401818.59375 0.3420623894459312 2 -0.2029342651367187 8 Unmodified _VAIESTPMI_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON 26.34127834903884 0.1960301806784604 4 {[VA]|[{I|L}G]}{I|L}E[R{M(Oxidation (M))|F}]PE 8 4 + 38.874 0.0 0.0 4.0515 4.0515 80.412 0.0 0.0 0.0 13.97437765255519 20.457574905606744 13.97437765255519 13.979400086720377 0 0.0 1.5228787452803376 0.0 0.0 {[VA]|[{I|L}G]}{I|L}E[R{M(Oxidation (M))|F}]PE;[{I|L}A]VE[R{M(Oxidation (M))|F}]PE;[{I|L}A]EV[R{M(Oxidation (M))|F}]PE;[TP][{I|L}T][R{M(Oxidation (M))|F}]PE;{[QN]|[E{I|L}]|[KN]}AV[R{M(Oxidation (M))|F}]PE;{M(Oxidation (M))|F}P[HV][NP]H{I|L};{M(Oxidation (M))|F}P[HQ][YR]{I|L};{[TV]|[{I|L}S]}[H{I|L}][HQ]PE;{M(Oxidation (M))|F}P[R{M(Oxidation (M))|F}]V[TP]P;[EP][RP][HV]PE 4.0515;2.5945;2.4643;2.1798;1.8076;1.7671;1.5836;1.501;1.4161;1.299 -;-;-;-;-;-;-;-;-;- 324 1 1.042 52954.1 1.0 8858 4831 13683 HBL1_DMSO_200M_050219_2,13691 HBL1_DMSO_200M_050219_2,13691,VAIESTPMI False True VAIESTPMI 72.496723 480.756762683392 17751232.0 13683.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-9|SON 3.559786558151245 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13692 72.499 133.0 364880.0 25 0 24478.0 + 13855 HVIDSIVGDGI 11 81 562.8011584963792 1123.5877640595584 2 562.8014404177666 MULTI CID FTMS 0 0 0 13683 368023.65625 0.5658394199442499 2 -0.2029342651367187 9 Unmodified _HVIDSIVGDGI_ ENSG00000166801|ENST00000675163|FAM111A 71.92227651296345 0.0268337859456942 4 [HV]{I|L}DS{I|L}V[DG]G{I|L} 11 0 + 74.487 0.0 0.0 6.6294 6.6294 89.819 0.0 0.0 0.0 21.09122312673766 58.98548823312613 21.09122312673766 11.57577319177794 0 0.8252574989159953 1.5228787452803376 0.805462187404089 0.0 + + [HV]{I|L}DS{I|L}V[DG]G{I|L};[HV]{I|L}DS{I|L}V[DN]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]S{I|L}V[DG]G{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]S{I|L}[RD]G{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV]S{I|L}V[DN]{I|L} 6.6294;5.5991;3.7869;2.9121;2.7566 +;-;-;-;- + 179 1 1.042 45636.7 1.0 8859 4831 13683 HBL1_DMSO_200M_050219_2,13692 HBL1_DMSO_200M_050219_2,13692,HVIDSIVGDGI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13693 72.502 98.0 623160.0 25 0 38862.0 + 24738 MPELGLRSV 9 84 501.275926980557 1000.537301027914 2 501.2762328982353 MULTI CID FTMS 0 0 0 13683 359666.6875 0.7706268263690683 -1 0.0695953369140625 10 Unmodified _MPELGLRSV_ ENSG00000012211|ENST00000599218|PRICKLE3;nc|ENSG00000012211|O43900-2|PRICKLE3 31.26834338654808 0.1333407332142048 4 MPE{I|L}G 5 4 59.251 0.0 0.0 5.9219 0.0 0.0 0.0 470.2740572565063 470.2740572565063 31.80388420958125 0.0 0.0 0.0 0 0.7396518287104438 1.3979400086720375 0.3807196863200844 0.0 + MPE{I|L}G 5.9219 + + 58 + 1 1.042 50907.1 1.0 8860 4831 13683 HBL1_DMSO_200M_050219_2,13693 HBL1_DMSO_200M_050219_2,13693,MPELGLRSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13694 72.504 129.0 593450.0 25 0 107170.0 42468 VTGLVHKW 8 99 470.2735950578147 938.5326371824294 2 470.2722045779228 MULTI CID FTMS 0 0 0 13683 342833.0 0.560504503591306 -1 0.0695953369140625 11 Unmodified _VTGLVHKW_ ENSG00000176715|ENST00000614302|ACSF3 2.302733041254933 0.8103549651115762 4 {I|L} 1 7 10.0 0.0 0.0 1.0655 0.0 0.0 807.4376950210998 0.0 807.4376950210998 0.0 -6.197887582883936 -6.197887582883936 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0655 + + 8 + 1 1.042 64660.7 1.0 8861 4831 13683 HBL1_DMSO_200M_050219_2,13694 HBL1_DMSO_200M_050219_2,13694,VTGLVHKW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13695 72.506 91.0 303370.0 25 0 16903.0 + 14158 IDCFLRPKK 9 66 560.3218664409794 1118.6291799487587 2 560.3232910037041 MULTI CID FTMS 0 0 0 13683 334594.34375 0.2361120201467786 -4 0.40142822265625 12 Unmodified _IDCFLRPKK_ REV__ENSG00000130779|ENST00000620786|CLIP1;REV__ENST00000501271.2_1_12:122757424-122758769:-|nuORF;REV__nc|ENSG00000130779|P30622-1|CLIP1;REV__nc|ENSG00000130779|P30622-2|CLIP1 4.3292370932331545 0.7635526921153418 4 {NN|[MP]|[D{I|L}]|[EV]}C{I|L} 4 -1 22.051 0.0 0.0 1.9713 0.0 0.0 0.0 671.4033553240118 671.4033553240118 8.414505248515773 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}C{I|L} 1.9713 - 27 1 1.042 28481.6 1.0 8862 4831 13683 HBL1_DMSO_200M_050219_2,13695 HBL1_DMSO_200M_050219_2,13695,IDCFLRPKK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13696 72.52 800.0 460240.0 25 0 85877.0 + -1 VSAMKSSI 8 177 419.7213163056855 837.428079678171 2 419.7206298708916 MULTI CID FTMS 0 0 0 13683 235613.453125 0.7582375382984035 -1 0.0695953369140625 13 Oxidation (M) _VSAM(Oxidation (M))KSSI_ REV__ENSG00000186871|ENST00000334463|ERCC6L 24.67388899826682 0.525179942228231 4 V{M(Oxidation (M))|F} 2 -1 35.144 0.0 0.0 4.1966 0.0 0.0 0.0 588.2835197832799 588.2835197832799 20.95807733281792 0.0 0.0 0.0 0 0.0451140161145328 1.5228787452803376 0.0 0.0 V{M(Oxidation (M))|F} 4.1966 - 233 + 1 1.042 286115.5 0.8999999761581421 8863 4831 13683 HBL1_DMSO_200M_050219_2,13696 HBL1_DMSO_200M_050219_2,13696,VSAMKSSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13697 72.532 698.0 282780.0 25 0 30902.0 + 12753 GVPDEEGWVKV 11 159 607.8067572248602 1213.5989615165204 2 607.8063842654228 MULTI CID FTMS 0 0 0 13683 226933.3125 0.8884844020210395 1 -0.1042022705078125 14 Unmodified _GVPDEEGWVKV_ ENSG00000189306|ENST00000323013|RRP7A;ENST00000357802.6_1_22:42970741-42976277:-|nuORF;nc|ENSG00000291035|Q9NSQ0|RRP7BP 57.24910588100465 0.0803095280301687 4 [DP]EEGWVKVR 10 3 + 78.374 0.0 0.0 6.458 6.458 78.841 0.0 0.0 0.0 2.8535392166302813 2.8535392166302813 2.8535392166302813 2.8535392166302813 0 0.1643943297944484 1.5228787452803376 1.2396518287104437 0.0 [DP]EEGWVKVR;[VG]PDEEGWVKV;[VG]PDEEGWVVK;[DP]EEGVWKVR;[DP]EEG{[DA]|[EG]}VKVR;[VG]PDEE[QA]{I|L}GTV;[DP]EWWVKVGV;[VG]PDEWWVKV;[DP]EEGV{[DA]|[EG]}KVR;[VG]PDEERRGTV 6.458;6.2229;5.9728;5.9608;5.7029;5.3276;5.2707;5.2233;5.2057;5.1911 -;+;-;-;-;-;-;-;-;- + 3186 1 1.042 143542.3 1.0 8864 4831 13683 HBL1_DMSO_200M_050219_2,13697 HBL1_DMSO_200M_050219_2,13697,GVPDEEGWVKV True True GVPDEEGWVKV 72.532187 607.806384265423 2692771.0 13683.0 ENSG00000189306|ENST00000323013|RRP7A;;ENST00000357802.6_1_22:42970741-42976277:-|nuORF;;nc|ENSG00000291035|Q9NSQ0|RRP7BP 7.855080604553223 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13698 72.534 93.0 768560.0 25 0 58669.0 + 23573 LTMPDTPRL 9 111 522.2809388359473 0 522.2807494997978 PEAK CID FTMS 0 0 0 13683 243319.984375 0.9222749071712544 1 -0.1042022705078125 15 Unmodified _LTMPDTPRL_ chr1:160750093-160751345|41|14.17|0.69|4.35|+|ENST00000458602|SLAMF7,SLAMF7;chr1:160750132-160750304|41|19.76|0.74|4.74|+|ENST00000621377|SLAMF7,SLAMF7;ENSG00000026751|ENST00000368043|SLAMF7;ENST00000444090.6_1_1:160718220-160722967:+|nuORF;nc|ENSG00000026751|Q9NQ25-2|SLAMF7;nc|ENSG00000026751|Q9NQ25-3|SLAMF7;nc|ENSG00000026751|Q9NQ25-6|SLAMF7;nc|ENSG00000026751|Q9NQ25-7|SLAMF7 36.506200033944 0.0788933506710822 4 TMPDT 5 4 33.954 0.0 0.0 3.2568 0.0 0.0 113.08572913498196 381.2250155084594 494.31074464344135 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 + TMPDT 3.2568 + + 135 + 1 1.042 61043.5 1.0 8865 4831 13683 HBL1_DMSO_200M_050219_2,13698 HBL1_DMSO_200M_050219_2,13698,LTMPDTPRL True True LTMPDTPRL 72.534229 522.280749499798 3049959.75 13683.0 nc|ENSG00000026751|Q9NQ25-3|SLAMF7;;ENSG00000026751|ENST00000368043|SLAMF7;;chr1:160750093-160751345|41|14.17|0.69|4.35|+|ENST00000458602|SLAMF7,SLAMF7;;chr1:160750132-160750304|41|19.76|0.74|4.74|+|ENST00000621377|SLAMF7,SLAMF7;;nc|ENSG00000026751|Q9NQ25-6|SLAMF7;;nc|ENSG00000026751|Q9NQ25-7|SLAMF7;;ENST00000444090.6_1_1:160718220-160722967:+|nuORF;;nc|ENSG00000026751|Q9NQ25-2|SLAMF7 6.097740014394124 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13699 72.539 266.0 373870.0 25 0 87544.0 + 11830 GLPHCKGL 8 107 412.7268277249085 823.4391025166169 2 412.7263976931572 MULTI CID FTMS 0 0 0 13683 215923.28125 0.6353685808030098 -1 0.0695953369140625 16 Unmodified _GLPHCKGL_ REV__ENSG00000147614|ENST00000285393|ATP6V0D2 10.183394434864962 0.7604730176254005 4 [DP][QP]VVAV 8 -1 [DP][QP]V + + 25.662 -5.4409 -1.0146 3.1164 3.1164 46.192 0.0 0.0 0.0 0.0 15.204262829037845 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 [DP][QP]VVAV 3.1164 - 242 + 1 1.042 81080.4 1.0 8866 4831 13683 HBL1_DMSO_200M_050219_2,13699 HBL1_DMSO_200M_050219_2,13699,GLPHCKGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13700 72.547 371.0 488610.0 25 0 46555.0 + 20786 LLVLFLHM 8 164 493.29948052792633 984.5844081226528 2 493.2987548708916 MULTI CID FTMS 0 0 0 13683 204727.078125 0.7765267446338447 1 -0.1042022705078125 17 Unmodified _LLVLFLHM_ REV__ENST00000374466.3_1_10:43650697-43650823:+|nuORF 24.20995872069341 0.5349487244130675 4 {I|L}{I|L}VV{M(Oxidation (M))|F}K 6 -1 48.454 0.0 0.0 4.9212 0.0 0.0 0.0 282.1096590631469 282.1096590631469 32.145385410690224 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}{I|L}VV{M(Oxidation (M))|F}K 4.9212 - 1931 + 1 1.042 139375.2 1.0 8867 4831 13683 HBL1_DMSO_200M_050219_2,13700 HBL1_DMSO_200M_050219_2,13700,LLVLFLHM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13701 72.561 800.0 91878.0 25 0 16915.0 -1 0 54 1096.1215383158828 3285.3427855478485 3 1096.790332019329 MULTI CID FTMS 0 0 0 13683 187474.546875 1.0 0 0.0 18 4 YY 2 -1 10.969 0.0 0.0 0.33388 0.0 0.0 1310.4520267022235 1645.7598695853576 2956.211896287581 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YY 0.33388 - 16 + 1 1.042 64857.0 0.800000011920929 8868 4831 13683 HBL1_DMSO_200M_050219_2,13701 HBL1_DMSO_200M_050219_2,13701, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13702 72.563 108.0 348180.0 25 0 57880.0 + 45028 YPVQEVIV 8 64 473.76655504919546 945.5185571651908 2 473.7665893435478 MULTI CID FTMS 0 0 0 13683 189133.5625 0.497455750675813 -1 0.0695953369140625 19 Unmodified _YPVQEVIV_ REV__ENSG00000102034|ENST00000308167|ELF4 17.086550045450526 0.6584923310065985 4 {I|L}V 2 -1 16.198 0.0 0.0 1.7131 0.0 0.0 715.3554845106972 0.0 715.3554845106972 0.0 1.303337684950062 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 1.7131 + + 44 + 1 1.042 35469.1 1.0 8869 4831 13683 HBL1_DMSO_200M_050219_2,13702 HBL1_DMSO_200M_050219_2,13702,YPVQEVIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13703 72.577 800.0 144480.0 25 0 24781.0 -1 0 88 1177.4554005152172 0 1177.463061511517 PEAK CID FTMS 0 0 0 13683 192294.34375 0.6325623992188957 5 -0.5357742309570312 20 4 G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{I|L}{I|L}VPE 9 -1 24.432 0.0 0.0 1.0384 0.0 0.0 811.2104093294596 524.1617525690061 1335.3721618984655 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9896518287104438 0.0 G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{I|L}{I|L}VPE 1.0384 - 400 + 1 1.042 89443.4 0.7400000095367432 8870 4831 13683 HBL1_DMSO_200M_050219_2,13703 HBL1_DMSO_200M_050219_2,13703, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13705 72.581 2.1 25361000.0 25 0 3526900.0 + 21660 LPLKVIHS 8 49 453.7924634572879 0 453.7925292849541 PEAK CID FTMS 0 0 0 13704 29995634.0 0.9248460030600826 -2 0.173797607421875 1 Unmodified _LPLKVIHS_ REV__ENSG00000137817|ENST00000569795|PARP6;REV__ENST00000566831.5_1_15:72542421-72543610:-|nuORF;REV__nc|ENSG00000137817|Q2NL67-2|PARP6 15.847184025352805 0.4758297917908462 4 PP 2 -1 15.217 0.0 0.0 1.6803 0.0 0.0 113.08325085762496 595.3581581725609 708.4414090301859 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PP 1.6803 - 10 + 1 1.043 49121.7 1.0 8871 4832 13704 HBL1_DMSO_200M_050219_2,13705 HBL1_DMSO_200M_050219_2,13705,LPLKVIHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13706 72.582 3.7 23457000.0 25 0 2969800.0 + 22323 LPSHGVPLI 9 75 466.7820194832304 931.5494860332608 2 466.7820617556572 MULTI CID FTMS 0 0 0 13704 16790074.0 1.0 0 0.0 2 Unmodified _LPSHGVPLI_ ENSG00000089053|ENST00000261819|ANAPC5;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5 42.09456458481378 0.0639583784996157 4 [{I|L}P][HS]GVP{I|L}{I|L} 9 0 + 58.126 0.0 0.0 6.2398 6.2398 89.194 0.0 0.0 0.0 9.703774648612791 26.427127331550864 9.703774648612791 14.030899869919438 0 1.305462187404089 2.0 0.0 0.0 + + [{I|L}P][HS]GVP{I|L}{I|L};[{I|L}P][HS]GPV{I|L}{I|L};[HS][PG]V{I|L}P{I|L}{I|L};[HS][VG]P{I|L}P{I|L}{I|L};[HS][PG]VP{I|L}{I|L}{I|L};[HS][PG]{I|L}VP{I|L}{I|L};[HS][VG]PP{I|L}{I|L}{I|L};[HS][{I|L}P]GVP{I|L}{I|L};[HS][PG]{I|L}PV{I|L}{I|L};[HS][{I|L}P]GPV{I|L}{I|L} 6.2398;4.7336;4.387;4.2529;3.5272;3.5257;3.393;3.3916;2.0195;1.8854 +;-;-;-;-;-;-;-;-;- + 356 1 1.043 74984.9 1.0 8872 4832 13704 HBL1_DMSO_200M_050219_2,13706 HBL1_DMSO_200M_050219_2,13706,LPSHGVPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13707 72.584 9.5 4673300.0 25 0 421660.0 + 41565 VPPEILNNV 9 75 497.7825498997915 993.550546866383 2 497.7822448611259 MULTI CID FTMS 0 0 0 13704 6103132.0 0.7148725292598858 -3 0.3385772705078125 3 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 32.30548876998284 0.1201446275138228 4 [VP][EP]{I|L}{I|L}N{[NV]|[RG]} 9 0 + 41.36 0.0 0.0 4.1629 4.1629 69.839 0.0 0.0 0.0 3.010299956639805 5.642492736872597 3.010299956639805 3.010299956639805 0 0.4247425010840047 2.0 0.0 0.0 + + [VP][EP]{I|L}{I|L}N{[NV]|[RG]};[EP]P{I|L}V{I|L}N{[NV]|[RG]};[EP]P{I|L}{I|L}VN{[NV]|[RG]};[EP]{I|L}PV{I|L}N{[NV]|[RG]};[EP]PV{I|L}{I|L}N{[NV]|[RG]};[EP]{I|L}P{I|L}VN{[NV]|[RG]};[VP][EP]{I|L}{I|L}GG{[NV]|[RG]};[EP]P{I|L}V{I|L}GG{[NV]|[RG]};[EP]{I|L}PV{I|L}GG{[NV]|[RG]};[EP]P{I|L}{I|L}VGG{[NV]|[RG]} 4.1629;3.8599;3.5569;3.5569;3.5569;3.2539;3.2361;2.9331;2.6301;2.6301 +;-;-;-;-;-;-;-;-;- + 238 1 1.043 36958.3 1.0 8873 4832 13704 HBL1_DMSO_200M_050219_2,13707 HBL1_DMSO_200M_050219_2,13707,VPPEILNNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13708 72.585 43.0 1042100.0 25 0 218700.0 -1 0 48 625.3192910805553 624.3120146139553 1 625.3190795779228 MULTI CID FTMS 0 0 0 13704 1654732.25 0.1556165212302334 5 -0.4981002807617187 4 4 VA{I|L}E 4 -1 52.397 0.0 0.0 8.3927 0.0 0.0 0.0 209.0570314996704 209.0570314996704 36.37112888305226 0.0 0.0 0.0 0 0.2215141619232908 1.154901959985743 0.6694451763165201 0.0 VA{I|L}E 8.3927 - 135 + 1 1.043 42815.8 1.0 8874 4832 13704 HBL1_DMSO_200M_050219_2,13708 HBL1_DMSO_200M_050219_2,13708, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13709 72.586 65.0 1001900.0 25 0 105080.0 + 41076 VNAIQPNI 8 96 434.7482694486962 867.4819859641924 2 434.7481262087822 MULTI CID FTMS 0 0 0 13704 1094379.125 0.1986145400630899 -2 0.173797607421875 5 Unmodified _VNAIQPNI_ ENST00000312655.8_1_17:57474537-57474684:+|nuORF 53.57557251787612 0.1224291679108181 4 {[NV]|[RG]}QA{I|L}PN{I|L} 8 2 {[NV]|[RG]}QA + + 30.054 4.6978 1.1397 3.4646 3.4646 47.077 0.0 0.0 0.0 0.0 19.341153291726982 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.6421590589602533 {[NV]|[RG]}QA{I|L}PN{I|L} 3.4646 - 164 + 1 1.043 54480.6 1.0 8875 4832 13704 HBL1_DMSO_200M_050219_2,13709 HBL1_DMSO_200M_050219_2,13709,VNAIQPNI True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13710 72.589 100.0 586420.0 25 0 139570.0 + 40838 VLNFRVTLCL 10 69 589.3429844827069 1176.6714160322138 2 589.3433715701103 MULTI CID FTMS 0 0 0 13704 1055689.0 1.0 0 0.0 6 Unmodified _VLNFRVTLCL_ REV__ENST00000373840.8_1_9:123943305-123943461:-|nuORF 1.6526216038709556 0.7189921496796233 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.043 51602.7 1.0 8876 4832 13704 HBL1_DMSO_200M_050219_2,13710 HBL1_DMSO_200M_050219_2,13710,VLNFRVTLCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13711 72.59 70.0 700600.0 25 0 97253.0 + -1 FPLCVRIGK 9 89 545.3171335917162 1088.6197142502324 2 545.3170654177666 MULTI CID FTMS 0 0 0 13704 609005.1875 0.2168081633452253 12 -1.2643661499023438 7 Carbamidomethyl (C) _FPLC(Carbamidomethyl (C))VRIGK_ REV__ENST00000431597.5_2_X:100912693-100914433:-|nuORF 7.289230182591677 0.6602208344931196 4 NPK 3 -1 23.188 0.0 0.0 2.13 0.0 0.0 731.4235096662125 0.0 731.4235096662125 0.0 12.350132189775309 0.0 0.0 0 0.0 0.0 0.0 0.0 NPK 2.13 - 15 1 1.043 43110.6 1.0 8877 4832 13704 HBL1_DMSO_200M_050219_2,13711 HBL1_DMSO_200M_050219_2,13711,FPLCVRIGK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13712 72.592 72.0 597400.0 25 0 51294.0 + 23899 LVMFEDVTV 9 87 526.7707054986234 1051.5268580640468 2 526.7734252810478 MULTI CID FTMS 0 0 0 13704 589914.5 1.0 0 0.0 8 Unmodified _LVMFEDVTV_ ENSG00000171574|ENST00000306910|ZNF584 13.50788311687929 0.4710407108020397 4 GTV 3 7 24.966 0.0 0.0 2.3742 0.0 0.0 776.3797155853343 0.0 776.3797155853343 0.0 13.8566032266867 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 GTV 2.3742 - 79 + 1 1.043 42041.1 1.0 8878 4832 13704 HBL1_DMSO_200M_050219_2,13712 HBL1_DMSO_200M_050219_2,13712,LVMFEDVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13713 72.595 151.0 463390.0 25 0 52628.0 + 6118 DSVRLLAV 8 100 436.7636592122036 871.5127654912071 2 436.7635681033134 MULTI CID FTMS 0 0 0 13704 510773.71875 0.883963205388161 -1 0.1042022705078125 9 Unmodified _DSVRLLAV_ ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 41.8396318013385 0.2035142800366642 4 [{I|L}A]SW{I|L}{I|L}AV 8 4 + 61.719 0.0 0.0 7.0818 7.0818 87.29 0.0 0.0 0.0 7.403626894942441 16.40978057358332 7.403626894942441 7.403626894942441 0 0.5 1.3979400086720375 0.3054621874040891 0.0 [{I|L}A]SW{I|L}{I|L}AV;{[VA]|[{I|L}G]}TW{I|L}{I|L}AV;{[DS]|[MA]|[CV]|TT}VR{I|L}{I|L}AV;{I|L}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{I|L}AV;[VS]DR{I|L}{I|L}AV;[{I|L}A]SWA{I|L}{I|L}V;{[VA]|[{I|L}G]}TWA{I|L}{I|L}V;{[DS]|[MA]|[CV]|TT}VRA{I|L}{I|L}V;{I|L}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}A{I|L}{I|L}V;[VS]DRA{I|L}{I|L}V 7.0818;6.2323;4.5909;4.2127;3.948;3.7273;2.8777;1.2363;1.2086;0.59343 -;-;+;-;-;-;-;-;-;- + 268 1 1.043 58869.9 1.0 8879 4832 13704 HBL1_DMSO_200M_050219_2,13713 HBL1_DMSO_200M_050219_2,13713,DSVRLLAV False True DSVRLLAV 72.594984 436.763568103313 4857110.5 13704.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 4.976194938023885 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13714 72.597 107.0 631000.0 25 0 56309.0 + 37131 TGYLNTVTV 9 109 484.2583831501523 966.5022133671048 2 484.2586547732353 MULTI CID FTMS 0 0 0 13704 499460.1875 0.0014210841356493 50 -4.8253936767578125 10 Unmodified _TGYLNTVTV_ ENSG00000204628|ENST00000512805|RACK1;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 13.90604991867851 0.4602628045680013 4 [{I|L}P]AHN{I|L}CTV 9 6 [{I|L}P]AH + + 27.964 11.001 2.6302 2.8933 2.8933 45.697 0.0 0.0 0.0 0.0 13.984484532805157 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 [{I|L}P]AHN{I|L}CTV 2.8933 - 228 + 1 1.043 57724.6 1.0 8880 4832 13704 HBL1_DMSO_200M_050219_2,13714 HBL1_DMSO_200M_050219_2,13714,TGYLNTVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13715 72.6 112.0 645280.0 25 0 74079.0 22381 LPSSSPVPIPV 11 94 546.8172236951062 1091.6198944570124 2 546.8159057497978 MULTI CID FTMS 0 0 0 13704 487452.21875 0.6666422919493942 -2 0.173797607421875 11 Unmodified _LPSSSPVPIPV_ ENSG00000110497|ENST00000683756|AMBRA1;nc|ENSG00000110497|Q9C0C7-2|AMBRA1;nc|ENSG00000110497|Q9C0C7-3|AMBRA1;nc|ENSG00000110497|Q9C0C7-4|AMBRA1;nc|ENSG00000110497|Q9C0C7-5|AMBRA1 36.12702656103203 0.2720571796884491 4 [{I|L}P]P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VPP{I|L}V 10 6 + 73.887 0.0 0.0 6.7686 6.7686 84.793 0.0 0.0 0.0 22.498774732166 61.66895006820745 22.498774732166 6.020599913279625 0 1.0 1.5228787452803376 0.3252574989159953 0.0 [{I|L}P]P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VPP{I|L}V;[{I|L}P]P[QT]MPP{I|L}V;[{I|L}P]{[SA]|[TG]}{[CP]|[EA]}VPP{I|L}V;[{I|L}P]{[CA]|SS}[PS]VPP{I|L}V;[{I|L}P]P[QT]PMP{I|L}V;[{I|L}P]{[SA]|[TG]}HKMP{I|L}V;{[HG]|PP}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VPP{I|L}V;[{I|L}P]P[QT]PNN{I|L}V;{[HG]|PP}{I|L}[QT]MPP{I|L}V;[{I|L}P]{[SA]|[TG]}HKNN{I|L}V 6.7686;6.2171;5.9291;5.6533;5.024;4.8627;4.5994;4.1289;4.0478;3.9676 -;-;-;-;-;-;-;-;-;- 669 1 1.043 63244.1 1.0 8881 4832 13704 HBL1_DMSO_200M_050219_2,13715 HBL1_DMSO_200M_050219_2,13715,LPSSSPVPIPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13716 72.602 143.0 572180.0 25 0 87972.0 + 9100 FFKDGLEM 8 99 493.7363813366529 985.458209740106 2 493.7360412478447 MULTI CID FTMS 0 0 0 13704 465810.875 1.0 0 0.0 12 Unmodified _FFKDGLEM_ ENSG00000133112|ENST00000530705|TPT1;nc|ENSG00000133112|P13693-2|TPT1 49.93300154707207 0.1395624531867191 4 {[VA]|[{I|L}G]}DK{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E 8 7 + 49.812 0.0 0.0 5.0547 5.0547 76.735 0.0 0.0 0.0 15.114492834995552 16.40978057358332 15.114492834995552 4.894257603872084 0 0.3252574989159953 0.6575773191777937 1.2059771852360797 0.0 {[VA]|[{I|L}G]}DK{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E;{[VA]|[{I|L}G]}DK{M(Oxidation (M))|F}{M(Oxidation (M))|F}ME;{[VA]|[{I|L}G]}S[VG]{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E;{[QD]|[EN]|[WG]|[KD]|[RS]}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VG]{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{M(Oxidation (M))|F}GP{M(Oxidation (M))|F}E;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}GP{M(Oxidation (M))|F}E;[VS]G{[VA]|[{I|L}G]}{M(Oxidation (M))|F}M{M(Oxidation (M))|F}E;{[VA]|[{I|L}G]}S[VG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ME;{[QD]|[EN]|[WG]|[KD]|[RS]}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}ME 5.0547;4.5581;3.5423;3.521;3.3806;3.3366;3.1294;3.0833;3.0456;3.0243 -;-;-;-;-;-;-;-;-;- 619 1 1.043 67193.0 1.0 8882 4832 13704 HBL1_DMSO_200M_050219_2,13716 HBL1_DMSO_200M_050219_2,13716,FFKDGLEM False True FFKDGLEM 72.602482 493.736041247845 6986180.0 13704.0 ENSG00000133112|ENST00000530705|TPT1;;nc|ENSG00000133112|P13693-2|TPT1 6.98136043548584 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13717 72.604 89.0 567700.0 25 0 35723.0 + -1 GVREVFEMA 9 93 519.2546768807168 1036.4948008282336 2 519.7568847537041 MULTI CID FTMS 0 0 0 13704 403706.375 0.9436239190978564 2 -0.2297439575195312 13 Oxidation (M) _DQCLIVM(Oxidation (M))SL_ ENSG00000155366|ENST00000339083|RHOC;ENSG00000067560|ENST00000418115|RHOA;ENST00000473074.1_1_1:113244164-113245337:-|nuORF 11.640296217721598 0.521594087909532 4 [YG]E{M(Oxidation (M))|F}[YV]{M(Oxidation (M))|F}{I|L} 8 -1 + 13.822 0.0 0.0 1.3336 1.3336 61.876 0.0 0.0 0.0 0.7235064100132167 1.249387366082999 0.7235064100132167 1.249387366082999 0 0.0 0.0 0.0 0.0 [YG]E{M(Oxidation (M))|F}[YV]{M(Oxidation (M))|F}{I|L};[YG]E{M(Oxidation (M))|F}[YV]{I|L}{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]T{M(Oxidation (M))|F}[YV]{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}T]T{M(Oxidation (M))|F}[YV]{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}RR{M(Oxidation (M))|F}E{[DS]|[MA]|[CV]|TT} 1.3336;1.213;1.0431;0.92261;0.071859 -;-;-;-;- 102 + 1 1.043 46639.9 1.0 8883 4832 13704 HBL1_DMSO_200M_050219_2,13717 HBL1_DMSO_200M_050219_2,13717,DQCLIVMSL False False GVREVFEMA 72.604461 519.756884753704 1189286.125 13704.0 ENSG00000155366|ENST00000339083|RHOC;;ENSG00000067560|ENST00000418115|RHOA;;ENST00000473074.1_1_1:113244164-113245337:-|nuORF 1.3087317645549774 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13718 72.614 565.0 282110.0 25 0 22182.0 + 40510 VITTVYVLLF 10 192 584.3569326533695 1166.699312373539 2 584.3569824099541 MULTI CID FTMS 0 0 0 13704 331228.25 0.4013609300976469 -6 0.6911087036132812 14 Unmodified _VITTVYVLLF_ REV__ENSG00000141194|ENST00000268912|OR4D1 7.289230182591677 0.6929195370588109 4 [{I|L}V]N 3 -1 25.062 0.0 0.0 2.1481 0.0 0.0 0.0 837.481513871839 837.481513871839 8.898182314357985 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]N 2.1481 - 505 1 1.043 117857.6 1.0 8884 4832 13704 HBL1_DMSO_200M_050219_2,13718 HBL1_DMSO_200M_050219_2,13718,VITTVYVLLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13719 72.616 78.0 485590.0 25 0 50254.0 + + 44361 KTVDNFVAL 9 83 503.78191821193394 1005.549283490668 2 503.7818786501884 MULTI CID FTMS 0 0 0 13704 318777.5 1.0 0 0.0 15 Unmodified _YLRLEEAL_ ENST00000561048.1_1_15:64452264-64455191:-|nuORF;ENSG00000166794|ENST00000300026|PPIB 14.581692164780916 0.6954967302934248 4 A{I|L} 2 -1 22.959 0.0 0.0 2.2832 0.0 0.0 803.4169572961351 0.0 803.4169572961351 0.0 9.146518864155126 0.0 0.0 0 0.5 0.0 0.0 0.0 A{I|L} 2.2832 + + 32 + 1 1.043 33745.1 1.0 8885 4832 13704 HBL1_DMSO_200M_050219_2,13719 HBL1_DMSO_200M_050219_2,13719,YLRLEEAL False False KTVDNFVAL 72.616157 503.781878650188 3079164.0 13704.0 ENST00000561048.1_1_15:64452264-64455191:-|nuORF;;ENSG00000166794|ENST00000300026|PPIB 2.756422360738118 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13720 72.63 800.0 366580.0 25 0 22707.0 + 14027 IAGPGLPDL 9 218 426.7448370179608 851.4751211027217 2 426.7450744509697 MULTI CID FTMS 0 0 0 13704 254392.0 0.3582305088319922 -2 0.173797607421875 16 Unmodified _IAGPGLPDL_ nc|ENSG00000284922|Q8WZ04-2|TOMT;nc|ENSG00000284922|Q8WZ04|TOMT 32.116972079565 0.1225432171549407 4 [{I|L}A]NP{I|L} 5 5 28.901 0.0 0.0 3.3942 0.0 0.0 0.0 340.14955452138014 340.14955452138014 8.68944035183194 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}A]NP{I|L} 3.3942 - 669 1 1.043 225091.1 0.9800000190734864 8886 4832 13704 HBL1_DMSO_200M_050219_2,13720 HBL1_DMSO_200M_050219_2,13720,IAGPGLPDL True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13721 72.641 643.0 300300.0 25 0 14514.0 + 30264 QYIRTFVDY 9 185 602.8027665158397 1203.5909800984791 2 602.8034545779228 MULTI CID FTMS 0 0 0 13704 250588.953125 0.8457052033960476 -2 0.173797607421875 17 Unmodified _QYIRTFVDY_ ENSG00000140526|ENST00000352732|ABHD2 125.52916310638032 0.0024920486013546 4 {[YD]|[{M(Oxidation (M))|F}M]}[RK]V{M(Oxidation (M))|F}VDY 9 3 + 73.896 0.0 0.0 6.1396 6.1396 87.439 0.0 0.0 0.0 9.905076301912947 14.973024840566469 9.905076301912947 9.905076301912947 0 1.2134679910804405 1.6989700043360187 1.5044321917401078 1.805462187404089 {[YD]|[{M(Oxidation (M))|F}M]}[RK]V{M(Oxidation (M))|F}VDY;{[{M(Oxidation (M))|F}C]|[YS]}RRV{M(Oxidation (M))|F}VDY;{[TV]|[{I|L}S]}[VP][HQ]{M(Oxidation (M))|F}VDY;{[TV]|[{I|L}S]}[VP]{M(Oxidation (M))|F}[HK]VDY;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}[YQ]{M(Oxidation (M))|F}VDY;[{M(Oxidation (M))|F}T][WK]V{M(Oxidation (M))|F}VDY;{[TV]|[{I|L}S]}[VP]{M(Oxidation (M))|F}T{M(Oxidation (M))|F}[KC]Y;{[YD]|[{M(Oxidation (M))|F}M]}[RK]VE[MT]Y;[AG]ANV{M(Oxidation (M))|F}T{M(Oxidation (M))|F}[HK]{I|L};[{I|L}P][VS][HQ]{M(Oxidation (M))|F}VDY 6.1396;5.3166;4.8353;4.5227;4.4389;4.3316;4.003;3.9449;3.7949;3.7429 -;-;-;-;-;-;-;-;-;- 2405 1 1.043 139407.0 1.0 8887 4832 13704 HBL1_DMSO_200M_050219_2,13721 HBL1_DMSO_200M_050219_2,13721,QYIRTFVDY True True QYIRTFVDY 72.641186 602.803454577923 3250540.0 13704.0 ENSG00000140526|ENST00000352732|ABHD2 7.665540059407552 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13722 72.655 800.0 265860.0 25 0 26216.0 + 22471 HPIVVPGL 8 219 416.25788653866624 830.5012201441325 2 416.2574340701103 MULTI CID FTMS 0 0 0 13704 231863.0625 1.0 0 0.0 18 Unmodified _LPVHVLGP_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 41.81723621529253 0.2038889569391319 4 [{I|L}P]VHVPG{I|L} 8 2 + 54.645 0.0 0.0 6.5798 6.5798 81.157 0.0 0.0 0.0 5.671910225207938 11.167053245199623 5.671910225207938 3.679767852945943 0 1.4802046884880935 1.5228787452803376 0.0 0.0 [{I|L}P]VHVPG{I|L};[{I|L}P]HVVPG{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VVPG{I|L};[{I|L}P]VVHPG{I|L};[{I|L}P]VH[RP]{I|L};[VP]{I|L}HVPG{I|L};[{I|L}P]HV[RP]{I|L};[{I|L}P]VV[YQ]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V[RP]{I|L};[VP]{I|L}VHPG{I|L} 6.5798;6.1367;5.8968;5.5622;5.0194;4.7481;4.5763;4.0018;3.825;3.7305 -;-;-;-;-;-;-;-;-;- 288 1 1.043 164206.7 0.8899999856948853 8888 4832 13704 HBL1_DMSO_200M_050219_2,13722 HBL1_DMSO_200M_050219_2,13722,LPVHVLGP False False HPIVVPGL 72.655001 416.25743407011 2308361.0 13704.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 5.592413107554118 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13723 72.662 295.0 325570.0 25 0 44099.0 + 23989 LVVDWDHHL 9 107 378.5296195336691 1132.567029201207 3 378.5292846560478 MULTI CID FTMS 0 0 0 13704 207971.078125 0.8041582430372215 -1 0.1042022705078125 19 Unmodified _LVVDWDHHL_ ENSG00000168894|ENST00000306368|RNF181;ENST00000461845.1_1_2:85822886-85823939:+|nuORF 39.94969957227396 0.0757326808254658 4 [{I|L}V]VDWDHH{I|L} 9 0 + 71.704 0.0 0.0 6.3311 6.3311 90.982 0.0 0.0 0.0 43.82409132530484 1.5697710299550494 1.5697710299550494 23.521825181113627 0 0.3252574989159953 2.0 0.7059771852360797 0.0 + + [{I|L}V]VDWDHH{I|L};[{I|L}V]VDWHHD{I|L};[{I|L}V]VDWHHEV;[{I|L}V]VD[{M(Oxidation (M))|F}V]HH[PA];[{I|L}V]V[{M(Oxidation (M))|F}V]DHH[PA];[{I|L}V][MT]{I|L}DHH[PA];[{I|L}V]VHH[WD]D{I|L};[{I|L}V]VHH[WD]EV 6.3311;4.2543;4.1579;3.1975;2.9317;1.9784;1.8902;1.7939 +;-;-;-;-;-;-;- + 620 + 1 1.043 89622.8 1.0 8889 4832 13704 HBL1_DMSO_200M_050219_2,13723 HBL1_DMSO_200M_050219_2,13723,LVVDWDHHL True True LVVDWDHHL 72.661868 378.529284656048 2016323.75 13704.0 ENST00000461845.1_1_2:85822886-85823939:+|nuORF;;ENSG00000168894|ENST00000306368|RNF181 7.469958305358887 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13724 72.676 800.0 120950.0 25 0 11992.0 -1 0 102 984.9452234514644 1967.8758939697288 2 984.9469482302666 MULTI CID FTMS 0 0 0 13704 192402.859375 0.6916616844129265 2 -0.2297439575195312 20 4 [{I|L}A][WR]PP 6 -1 27.381 0.0 0.0 1.3914 0.0 0.0 0.0 1244.4354734620174 1244.4354734620174 0.2856198787289976 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.6237125054200234 [{I|L}A][WR]PP 1.3914 - 3143 1 1.043 68792.9 0.9800000190734864 8890 4832 13704 HBL1_DMSO_200M_050219_2,13724 HBL1_DMSO_200M_050219_2,13724, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13726 72.68 17.0 2712000.0 25 0 378760.0 + 3101 AVPDEIPPLE 10 68 540.2849079987573 1078.5552630643144 2 540.2849609255791 MULTI CID FTMS 0 0 0 13725 2780085.5 0.0925019401518875 6 -0.5690536499023438 1 Unmodified _AVPDEIPPLE_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 19.62595529434964 0.5182375435722777 4 [DP]E{I|L}AVPP{I|L}E 10 4 [DP]E{I|L}AV + + 29.68 25.406 4.0695 2.7519 2.7519 45.483 0.0 0.0 0.0 0.0 -2.0458319767804767 -2.0458319767804767 0.0 0 0.5 0.0 0.2742275032520141 0.0 [DP]E{I|L}AVPP{I|L}E 2.7519 - 161 + 1 1.043 42437.9 1.0 8891 4833 13725 HBL1_DMSO_200M_050219_2,13726 HBL1_DMSO_200M_050219_2,13726,AVPDEIPPLE False True AVPDEIPPLE 72.68002 540.284960925579 1278361824.0 13725.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 6.306965192159017 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13727 72.682 95.0 945980.0 25 0 249580.0 -1 0 40 1163.457987468611 3487.352133006033 3 1163.796679675579 MULTI CID FTMS 0 0 0 13725 1731492.25 0.0141387681351845 7 -0.7490234375 2 4 E 1 -1 6.9897 0.0 0.0 0.20043 0.0 0.0 2831.1240316716107 524.1636346521296 3355.2876663237403 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20043 - 7 + 1 1.043 83564.2 1.0 8892 4833 13725 HBL1_DMSO_200M_050219_2,13727 HBL1_DMSO_200M_050219_2,13727, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13728 72.683 15.0 3507600.0 25 0 505350.0 + 38901 TVLEEIGNRV 10 64 565.3143248095537 1128.6140966859073 2 565.3146240115166 MULTI CID FTMS 0 0 0 13725 3618256.75 0.4386823912677118 -1 0.0987319946289062 3 Unmodified _TVLEEIGNRV_ ENSG00000157456|ENST00000288207|CCNB2;ENST00000561077.1_1_15:59397440-59406659:+|nuORF 34.93206674587334 0.2110832994570416 4 {[TV]|[{I|L}S]}{I|L}EE{I|L}MV[VP] 10 3 + 74.698 0.0 0.0 6.6185 6.6185 92.56 0.0 0.0 0.0 64.24024714504206 2.2969624387961574 2.2969624387961574 31.251837901751003 0 0.4247425010840047 2.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}{I|L}EE{I|L}MV[VP];{[TV]|[{I|L}S]}{I|L}E{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}[VP] 6.6185;3.8495 -;- 113 + 1 1.043 44922.1 1.0 8893 4833 13725 HBL1_DMSO_200M_050219_2,13728 HBL1_DMSO_200M_050219_2,13728,TVLEEIGNRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13729 72.684 39.0 1419300.0 25 0 173340.0 + 45478 YTLDGGDIINA 11 100 576.2832705987777 1150.5519882643553 2 576.2836181521416 MULTI CID FTMS 0 0 0 13725 1219690.75 0.4063803396651726 -1 0.0987319946289062 4 Unmodified _YTLDGGDIINA_ ENSG00000204628|ENST00000512805|RACK1 34.40172386719151 0.2986346176549658 4 [YT]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L} 6 8 31.347 0.0 0.0 2.7245 0.0 0.0 0.0 313.1499856610928 313.1499856610928 16.641974908773925 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.75 0.0 [YT]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L} 2.7245 - 318 1 1.043 48082.1 1.0 8894 4833 13725 HBL1_DMSO_200M_050219_2,13729 HBL1_DMSO_200M_050219_2,13729,YTLDGGDIINA False True YTLDGGDIINA 72.68449 576.283618152142 19055476.0 13725.0 ENSG00000204628|ENST00000512805|RACK1 6.422726631164551 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13730 72.687 143.0 595930.0 25 0 28724.0 -1 0 106 959.113057108936 2874.3173419270083 3 959.4491454958916 MULTI CID FTMS 0 0 0 13725 830067.875 0.2614588145875474 -2 0.2029342651367187 5 4 HQMWD 5 -1 27.722 0.0 0.0 0.96446 0.0 0.0 1268.5593399467853 905.4269503229124 2173.9862902696977 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.3252574989159953 0.4247425010840047 HQMWD 0.96446 - 2291 + 1 1.043 67227.1 1.0 8895 4833 13725 HBL1_DMSO_200M_050219_2,13730 HBL1_DMSO_200M_050219_2,13730, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13731 72.696 497.0 343610.0 25 0 73628.0 -1 0 59 1114.4421356691869 3340.30457760776 3 1114.775805652142 MULTI CID FTMS 0 0 0 13725 523546.53125 0.929963672914573 -1 0.0987319946289062 6 4 E 1 -1 6.9897 0.0 0.0 0.20925 0.0 0.0 2684.075774214293 524.1626070611936 3208.238381275487 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20925 - 25 + 1 1.043 142247.4 1.0 8896 4833 13725 HBL1_DMSO_200M_050219_2,13731 HBL1_DMSO_200M_050219_2,13731, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13732 72.698 107.0 509460.0 25 0 111210.0 -1 CDGEMIIVL 9 89 525.2540726702763 1048.4935924073525 2 525.2538329958916 MULTI CID FTMS 0 0 0 13725 452525.34375 0.9743403536859256 -1 0.0987319946289062 7 Carbamidomethyl (C) _C(Carbamidomethyl (C))DGEMIIVL_ ENSG00000092201|ENST00000216297|SUPT16H 23.1484247019978 0.2366544122328345 4 T{I|L}{I|L}{I|L}V 5 -1 32.92 0.0 0.0 3.1397 0.0 0.0 491.11583144355626 0.0 491.11583144355626 0.0 10.713337517843655 0.0 0.0 0 0.7429928190999391 0.0 1.2302046884880935 0.0 T{I|L}{I|L}{I|L}V 3.1397 - 160 1 1.043 50555.8 1.0 8897 4833 13725 HBL1_DMSO_200M_050219_2,13732 HBL1_DMSO_200M_050219_2,13732,CDGEMIIVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13733 72.703 264.0 784780.0 25 0 65651.0 + 18420 KVVTIIPKI 9 173 505.8522618157847 1009.6899706983694 2 505.8523742556572 MULTI CID FTMS 0 0 0 13725 390967.84375 0.5286516238148411 -2 0.2029342651367187 8 Unmodified _KVVTIIPKI_ ENSG00000170632|ENST00000323716|ARMC10;ENST00000313754.4_1_3:94225612-94226386:-|nuORF;nc|ENSG00000170632|Q8N2F6-2|ARMC10;nc|ENSG00000170632|Q8N2F6-3|ARMC10;nc|ENSG00000170632|Q8N2F6-4|ARMC10;nc|ENSG00000170632|Q8N2F6-5|ARMC10;nc|ENSG00000170632|Q8N2F6-6|ARMC10 47.7319792270244 0.0453426645642791 4 KVVT{I|L}{I|L}PK{I|L} 9 0 + 66.339 0.0 0.0 6.5702 6.5702 85.376 0.0 0.0 0.0 16.19901631374755 7.303784685876423 7.303784685876423 7.303784685876423 0 2.2753187046026264 0.6575773191777937 0.0 0.0 + + KVVT{I|L}{I|L}PK{I|L};KVVT{I|L}{I|L}P{I|L}K;KVVT{I|L}{I|L}{I|L}PK 6.5702;5.8469;4.7725 +;-;- + 5979 + 1 1.043 155129.4 1.0 8898 4833 13725 HBL1_DMSO_200M_050219_2,13733 HBL1_DMSO_200M_050219_2,13733,KVVTIIPKI True True KVVTIIPKI 72.703371 505.852374255657 7788537.5 13725.0 nc|ENSG00000170632|Q8N2F6-3|ARMC10;;nc|ENSG00000170632|Q8N2F6-5|ARMC10;;nc|ENSG00000170632|Q8N2F6-2|ARMC10;;ENST00000313754.4_1_3:94225612-94226386:-|nuORF;;ENSG00000170632|ENST00000323716|ARMC10;;nc|ENSG00000170632|Q8N2F6-4|ARMC10;;nc|ENSG00000170632|Q8N2F6-6|ARMC10 3.309821685155233 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13734 72.706 121.0 680880.0 25 0 53979.0 + 19530 FLLDKKIGV 9 103 516.8259519873302 1031.6373510414603 2 516.8268310427666 MULTI CID FTMS 0 0 0 13725 343689.03125 0.1404432055213063 2 -0.2353286743164062 9 Unmodified _LFPLFVLAL_ nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2 28.17323086031832 0.1727213568982648 4 KD{I|L}{I|L}E 5 7 41.766 0.0 0.0 4.0485 0.0 0.0 415.2789478986344 0.0 415.2789478986344 0.0 17.81357210935475 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 KD{I|L}{I|L}E 4.0485 - 322 1 1.043 67387.2 1.0 8899 4833 13725 HBL1_DMSO_200M_050219_2,13734 HBL1_DMSO_200M_050219_2,13734,LFPLFVLAL False False FLLDKKIGV 72.70589 516.826831042767 38106890.75 13725.0 nc|ENSG00000166226|P78371-2|CCT2;;ENSG00000166226|ENST00000299300|CCT2 4.199897686640422 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13735 72.71 207.0 360620.0 25 0 36224.0 + + -1 TQYEFQVRV 9 107 585.247947009993 1168.481341086786 2 585.2474243044853 MULTI CID FTMS 0 0 0 13725 309829.75 1.0 0 0.0 10 Carbamidomethyl (C),Oxidation (M) _DLILC(Carbamidomethyl (C))M(Oxidation (M))EEM_ ENSG00000100385|ENST00000216223|IL2RB 4.75600775471527 0.7486543447549536 4 YE{M(Oxidation (M))|F}QVRV 7 -1 15.436 0.0 0.0 1.3211 0.0 0.0 228.99783185866244 0.0 228.99783185866244 0.0 0.6549096372256358 0.0 0.0 0 0.0 0.0 0.0 0.0 YE{M(Oxidation (M))|F}QVRV 1.3211 - 182 + 1 1.043 62325.4 1.0 8900 4833 13725 HBL1_DMSO_200M_050219_2,13735 HBL1_DMSO_200M_050219_2,13735,DLILCMEEM False False TQYEFQVRV 72.709834 585.247424304485 3170923.25 13725.0 ENSG00000100385|ENST00000216223|IL2RB 3.7768123944600425 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13736 72.713 154.0 740810.0 25 0 46271.0 + 41829 VPYEKGFAL 9 121 512.2796540513847 1022.5447551695694 2 512.2800781130791 MULTI CID FTMS 0 0 0 13725 299771.78125 0.0953053049325615 -3 0.2725296020507812 11 Unmodified _VPYEKGFAL_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 24.020572477871973 0.2255576514309169 4 VP[WQ]{I|L}GGG 8 6 49.976 0.0 0.0 4.8874 0.0 0.0 0.0 225.0880983942016 225.0880983942016 33.11579415612594 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.0 0.0 VP[WQ]{I|L}GGG 4.8874 - 2124 + 1 1.043 93871.0 1.0 8901 4833 13725 HBL1_DMSO_200M_050219_2,13736 HBL1_DMSO_200M_050219_2,13736,VPYEKGFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13737 72.724 659.0 436070.0 25 0 13874.0 + -1 MSASIGVVGV 10 95 919.4949205941246 0 919.4949828982352 PEAK CID FTMS 0 0 0 13725 247871.5625 0.8274282283161926 -1 0.0987319946289062 12 ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 4 SVGVMSATG 9 -1 41.838 0.0 0.0 2.2775 0.0 0.0 849.4444177489928 195.1146639459594 1044.5590816949525 0.0 0.0 0.0 0.0 0 0.0 0.0 2.579689690656103 0.0 SVGVMSATG 2.2775 - 2277 + 1 1.043 190873.0 1.0 8902 4833 13725 HBL1_DMSO_200M_050219_2,13737 HBL1_DMSO_200M_050219_2,13737, False False MSASIGVVGV 72.724428 919.494982898235 4087292.0 13725.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 4.983363231023152 1.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13738 72.738 800.0 163640.0 25 0 22509.0 -1 0 122 1147.9500810093282 2293.8856090854565 2 1147.951953113079 MULTI CID FTMS 0 0 0 13725 191737.8125 1.0 0 0.0 13 4 [YQ]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}DRSY 9 -1 37.074 0.0 0.0 1.6162 0.0 0.0 0.0 1161.3831426150066 1161.3831426150066 16.306175694588614 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.5796896906561032 [YQ]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}DRSY 1.6162 - 4459 1 1.043 102615.4 1.0 8903 4833 13725 HBL1_DMSO_200M_050219_2,13738 HBL1_DMSO_200M_050219_2,13738, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13739 72.75 692.0 259860.0 25 0 18666.0 + 17096 KLFEFMHET 9 211 591.2851610227573 1180.5557691123145 2 591.2852050662041 MULTI CID FTMS 0 0 0 13725 202260.375 1.0 0 0.0 14 Unmodified _KLFEFMHET_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 93.16586880292088 0.0136995152735431 4 K{I|L}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}MHET 9 0 + 66.559 0.0 0.0 5.638 5.638 87.015 0.0 0.0 0.0 14.628986834767773 14.628986834767773 14.628986834767773 14.628986834767773 0 2.610924374808178 0.4436974992327127 1.6906140654642814 0.0 + + K{I|L}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}MHET;[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}{I|L}KMHET;T{M(Oxidation (M))|F}R{I|L}{M(Oxidation (M))|F}MHET;[{M(Oxidation (M))|F}E]{I|L}{M(Oxidation (M))|F}KMHET;[Y{I|L}]{M(Oxidation (M))|F}{I|L}KMHET;K{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}MHET;K{I|L}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}M[YG]{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}{I|L}KMHTE;T{M(Oxidation (M))|F}HMK{M(Oxidation (M))|F}[RN]T;[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}{I|L}MKHET 5.638;4.3988;4.2211;4.1438;3.9193;3.7905;3.7214;3.7102;3.6876;3.5471 +;-;-;-;-;-;-;-;-;- + 8600 + 1 1.043 130978.0 1.0 8904 4833 13725 HBL1_DMSO_200M_050219_2,13739 HBL1_DMSO_200M_050219_2,13739,KLFEFMHET True True KLFEFMHET 72.750323 591.2838 2027569.125 13725.0 ENSG00000082898|ENST00000401558|XPO1;;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 6.986924966176351 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13740 72.757 400.0 369040.0 25 0 17071.0 + 21332 LPFEPSKKLYV 11 137 440.92358070004576 1319.748912700337 3 440.9238769412041 MULTI CID FTMS 0 0 0 13725 175625.625 0.4295599479729849 -1 0.0987319946289062 15 Unmodified _LPFEPSKKLYV_ ENSG00000114346|ENST00000392692|ECT2;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-3|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2 45.60251928735463 0.1419832550123853 4 {I|L}P{M(Oxidation (M))|F}EPKSK{I|L}YV 11 2 + 79.352 0.0 0.0 6.0126 6.0126 80.496 0.0 0.0 0.0 38.46910013008055 12.021538081365463 12.021538081365463 4.771212547196626 0 0.5924778212679485 1.5228787452803376 1.2059771852360797 0.0 {I|L}P{M(Oxidation (M))|F}EPKSK{I|L}YV;{I|L}P{M(Oxidation (M))|F}EPSKK{I|L}YV;{I|L}P{M(Oxidation (M))|F}EV{[NV]|[RG]}K{I|L}YV;[KS]PK{I|L}YE{M(Oxidation (M))|F}PV{I|L};[KS]PK{I|L}YEV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L};[PS]KK{I|L}YE{M(Oxidation (M))|F}PV{I|L};[PS]KK{I|L}YEV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L};[KS]PK{I|L}E{M(Oxidation (M))|F}PYV{I|L};[KS]PK{I|L}EY{M(Oxidation (M))|F}PV{I|L};[KS]PK{I|L}YVE{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L} 6.0126;5.6511;4.212;3.5783;3.4305;3.2656;3.1178;3.0931;3.0877;2.9406 -;+;-;-;-;-;-;-;-;- + 1730 + 1 1.043 123955.0 1.0 8905 4833 13725 HBL1_DMSO_200M_050219_2,13740 HBL1_DMSO_200M_050219_2,13740,LPFEPSKKLYV False True LPFEPSKKLYV 72.757467 440.923876941204 3225904.75 13725.0 ENSG00000114346|ENST00000392692|ECT2;;nc|ENSG00000114346|Q9H8V3-3|ECT2;;nc|ENSG00000114346|Q9H8V3-4|ECT2;;nc|ENSG00000114346|Q9H8V3-2|ECT2 5.651665608088176 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13741 72.767 428.0 310530.0 25 0 29169.0 + 17845 KQLDDLKVEL 10 166 400.8994449725738 1199.6765055179214 3 400.8994018435478 MULTI CID FTMS 0 0 0 13725 175447.890625 0.0011953240854833 18 -1.830230712890625 16 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 32.61649475675321 0.2358628368497494 4 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K 7 7 42.883 0.0 0.0 3.5746 0.0 0.0 0.0 356.1822787935652 356.1822787935652 28.904083829833223 0.0 0.0 0.0 0 0.8252574989159953 1.3010299956639813 0.7059771852360797 0.5387254899964358 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}K 3.5746 - 3057 1 1.043 99637.7 1.0 8906 4833 13725 HBL1_DMSO_200M_050219_2,13741 HBL1_DMSO_200M_050219_2,13741,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13742 72.78 772.0 178660.0 25 0 12502.0 -1 IHCQWCEERIF 11 151 789.3525118204744 1576.6904707077488 2 789.3545410037041 MULTI CID FTMS 0 0 0 13725 142414.78125 0.5566663922385541 -1 0.0987319946289062 17 2 Carbamidomethyl (C) _IHC(Carbamidomethyl (C))QWC(Carbamidomethyl (C))EERIF_ ENSG00000121486|ENST00000367506|TRMT1L;nc|ENSG00000121486|Q7Z2T5-2|TRMT1L 1.4819007175156935 0.86815623132643 4 [YQ]{I|L}S{I|L}V{I|L}ENY 10 -1 66.398 0.0 0.0 4.2113 0.0 0.0 0.0 351.0438631647094 351.0438631647094 12.26428287804042 0.0 0.0 0.0 0 1.325257498915995 0.9208187539523752 0.3054621874040891 0.872363747448347 [YQ]{I|L}S{I|L}V{I|L}ENY 4.2113 - 4987 + 1 1.043 97593.5 1.0 8907 4833 13725 HBL1_DMSO_200M_050219_2,13742 HBL1_DMSO_200M_050219_2,13742,IHCQWCEERIF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13743 72.794 800.0 204150.0 25 0 16147.0 + 12704 GVLRQIPVV 9 181 490.8167069424073 979.6188609516146 2 490.8159057497978 MULTI CID FTMS 0 0 0 13725 138105.53125 0.7660022797846814 1 -0.131011962890625 18 Unmodified _GVLRQIPVV_ ENSG00000179889|ENST00000396410|PDXDC1;nc|ENSG00000179889|Q6P996-3|PDXDC1;nc|ENSG00000179889|Q6P996-4|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1 57.47134341890925 0.0274820932774257 4 [VG][R{I|L}]Q{I|L}PVV 9 0 + 56.877 0.0 0.0 5.806 5.806 79.287 0.0 0.0 0.0 4.463950151760656 16.478174818886373 4.463950151760656 4.463950151760656 0 1.4489700043360187 1.3010299956639813 0.0 0.555462187404089 + + [VG][R{I|L}]Q{I|L}PVV;[{I|L}P][KT]N{I|L}PVV;[VG][R{I|L}][AG]{I|L}PVV;{[VA]|[{I|L}G]}[RV]Q{I|L}PVV;[VG][R{I|L}]QP{I|L}VV;[{I|L}T][KP]N{I|L}PVV;[{I|L}P][KT]ARPVV;[{I|L}P][KT]GG{I|L}PVV;[VG]A[{I|L}V]N{I|L}PVV;[{I|L}P][KT]NP{I|L}VV 5.806;5.3504;4.8661;4.8516;4.8041;4.5077;4.4806;4.4104;4.381;4.3484 +;-;-;-;-;-;-;-;-;- + 1286 1 1.043 123571.9 0.8999999761581421 8908 4833 13725 HBL1_DMSO_200M_050219_2,13743 HBL1_DMSO_200M_050219_2,13743,GVLRQIPVV True True GVLRQIPVV 72.793736 490.815905749798 1909022.5 13725.0 nc|ENSG00000179889|Q6P996-4|PDXDC1;;ENSG00000179889|ENST00000396410|PDXDC1;;nc|ENSG00000179889|Q6P996-5|PDXDC1;;nc|ENSG00000179889|Q6P996-3|PDXDC1 5.979606469472249 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13744 72.798 162.0 368460.0 25 0 31168.0 + -1 LFAAMPSRSL 10 104 554.7951974445551 1107.5758419559102 2 554.7911865115166 MULTI CID FTMS 0 0 0 13725 128701.5859375 0.4575368558482264 -4 0.4373092651367187 19 Oxidation (M) _LFAAM(Oxidation (M))PSRSL_ REV__ENSG00000148600|ENST00000623527|CDHR1;REV__ENST00000459673.1_1_10:85972822-85974374:+|nuORF 27.628801355627647 0.3479284626772844 4 {[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}VAE{I|L} 9 -1 + 40.441 0.0 0.0 3.6513 3.6513 63.624 0.0 0.0 0.0 0.457574905606755 16.478174818886373 0.457574905606755 0.457574905606755 0 0.3807196863200844 0.0 0.3494850021680094 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}VAE{I|L};{[TV]|[{I|L}S]}{[QS]|[NT]}[YV]VAE{I|L};{[TV]|[{I|L}S]}AA{[MG]|[TS]}{M(Oxidation (M))|F}VAE{I|L};{[CP]|[EA]}[KS][YV]VAE{I|L};{[VA]|[{I|L}G]}{[MS]|[{M(Oxidation (M))|F}A]}AA{M(Oxidation (M))|F}VAE{I|L};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))K]W{I|L}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[TA]{[MG]|[TS]}{M(Oxidation (M))|F}VAE{I|L};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}[W{I|L}]{I|L};[TA]{[VA]|[{I|L}G]}{[MG]|[TS]}{M(Oxidation (M))|F}VAE{I|L};{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))K]{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}{I|L} 3.6513;3.61;2.9269;2.2874;1.5772;1.3723;1.3054;1.2577;1.1735;1.1418 -;-;-;-;-;-;-;-;-;- 310 1 1.043 52353.3 1.0 8909 4833 13725 HBL1_DMSO_200M_050219_2,13744 HBL1_DMSO_200M_050219_2,13744,LFAAMPSRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13745 72.807 490.0 338900.0 25 0 58190.0 38746 TVAKGALA 8 165 365.726741015922 729.438929098644 2 365.7263061404228 MULTI CID FTMS 0 0 0 13725 126415.6015625 0.6514505700334454 -1 0.0987319946289062 20 Unmodified _TVAKGALA_ ENSG00000137843|ENST00000560346|PAK6;nc|ENSG00000137843|Q9NQU5-2|PAK6 4.75600775471527 0.7954636275367004 4 ES{I|L}{I|L}{I|L}R 6 7 + 57.238 0.0 0.0 7.8468 7.8468 78.388 0.0 0.0 0.0 26.197887582883936 0.3778856088939974 0.3778856088939974 0.3778856088939974 0 0.0 1.0 0.0 0.3494850021680094 ES{I|L}{I|L}{I|L}R;ES{I|L}{I|L}R{I|L};E{I|L}S{I|L}{I|L}R;E{I|L}S{I|L}R{I|L} 7.8468;7.795;5.6505;5.5987 -;-;-;- 141 + 1 1.043 132777.4 1.0 8910 4833 13725 HBL1_DMSO_200M_050219_2,13745 HBL1_DMSO_200M_050219_2,13745,TVAKGALA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13747 72.811 1.9 23093000.0 25 0 3095800.0 + 6271 DTVEPWVKV 9 77 536.7876595663572 1071.5607661995143 2 536.7903930544853 MULTI CID FTMS 0 0 0 13746 32377834.0 0.1897573255212943 -3 0.3339462280273437 1 Unmodified _DTVEPWVKV_ REV__ENSG00000155275|ENST00000389737|TRMT44;REV__nc|ENSG00000155275|Q8IYL2-2|TRMT44 25.399314129420983 0.2080152500878129 4 [EP]WVDTVKV 9 -1 + 55.411 0.0 0.0 5.1711 5.1711 72.05 0.0 0.0 0.0 5.642492736872597 14.960762528683702 5.642492736872597 1.817496819840656 0 0.0 0.0 0.3807196863200844 0.0 [EP]WVDTVKV;[EP]WVKVDTV;[EP]WVKVSEV;{[MG]|[TS]}[HS]VDTVKV;{[MG]|[TS]}[HS]VKVDTV;{[TV]|[{I|L}S]}[WP]RVDTV;[EP]WV[WR]TV;{[ES]|[DT]|[{I|L}C]}VV[QP]VDTV;[W{M(Oxidation (M))|F}]VR[HQ]TV;{[MG]|[TS]}[HS]VKVSEV 5.1711;5.0015;4.0896;3.9404;3.7708;3.5128;3.4898;3.4159;3.3831;2.8589 -;-;-;-;-;-;-;-;-;- 306 1 1.041 46173.6 1.0 8911 4834 13746 HBL1_DMSO_200M_050219_2,13747 HBL1_DMSO_200M_050219_2,13747,DTVEPWVKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13748 72.812 14.0 3604600.0 25 0 899530.0 + 36677 TAYPQVVVV 9 75 488.27941093069165 974.5442689281832 2 488.2792236208916 MULTI CID FTMS 0 0 0 13746 4701186.0 0.841341916793127 2 -0.2018280029296875 2 Unmodified _TAYPQVVVV_ ENSG00000166532|ENST00000535829|RIMKLB;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;nc|ENSG00000166532|Q9ULI2-2|RIMKLB 36.12702656103203 0.0967173616627612 4 [TA]Y[QP]VVVV 9 0 + 42.329 0.0 0.0 4.3435 4.3435 74.619 0.0 0.0 0.0 5.592181781659626 8.824995917031941 5.592181781659626 5.592181781659626 0 0.8182503180159344 1.3979400086720375 0.8494850021680094 0.0 + + [TA]Y[QP]VVVV;[QP]VVTAYVV;[QP]V[TA]YVVV;[QP]VY[TA]VVV;VV[QP]TAYVV;[QP]VVY[TA]VV;[QP]V[TA]VYVV;[QP]VYV[TA]VV;VV[QP]Y[TA]VV 4.3435;3.7697;3.3724;3.1584;3.0994;3.0315;2.6774;2.4137;2.3612 +;-;-;-;-;-;-;-;- + 169 1 1.041 46489.3 1.0 8912 4834 13746 HBL1_DMSO_200M_050219_2,13748 HBL1_DMSO_200M_050219_2,13748,TAYPQVVVV True True TAYPQVVVV 72.812216 488.279223620892 223816104.0 13746.0 ENSG00000166532|ENST00000535829|RIMKLB;;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;;nc|ENSG00000166532|Q9ULI2-2|RIMKLB 6.279082616170247 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13749 72.813 16.0 3528900.0 25 0 346420.0 + 21635 LPLARIATV 9 64 477.3109315032138 952.6073100732276 2 477.3109008669853 MULTI CID FTMS 0 0 0 13746 3087604.75 0.8662492679214581 -2 0.2297439575195312 3 Unmodified _LPLARIATV_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 34.40172386719151 0.1061884637610825 4 {I|L}P{I|L} 3 6 50.005 0.0 0.0 5.2493 0.0 0.0 0.0 626.3640566928642 626.3640566928642 29.058123225994752 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P{I|L} 5.2493 + + 74 + 1 1.041 49987.7 1.0 8913 4834 13746 HBL1_DMSO_200M_050219_2,13749 HBL1_DMSO_200M_050219_2,13749,LPLARIATV True True LPLARIATV 72.813396 477.310900866985 42824436.0 13746.0 nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27 4.72161849339803 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13750 72.815 31.0 1973200.0 25 0 186560.0 + 8915 FAHSILTV 8 93 444.2530390137843 886.4915250943686 2 444.2530700564384 MULTI CID FTMS 0 0 0 13746 1729674.625 0.9294888381245944 -1 0.131011962890625 4 Unmodified _FAHSILTV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 49.66892048692302 0.1408045912742846 4 S{I|L}{I|L}TV 5 3 34.481 0.0 0.0 3.8896 0.0 0.0 355.1655445783219 0.0 355.1655445783219 0.0 15.553396606206888 0.0 0.0 0 0.8935078169319297 0.0 1.3494850021680094 0.0 + S{I|L}{I|L}TV 3.8896 + + 87 1 1.041 54082.8 1.0 8914 4834 13746 HBL1_DMSO_200M_050219_2,13750 HBL1_DMSO_200M_050219_2,13750,FAHSILTV False True FAHSILTV 72.814573 444.253070056438 16251999.0 13746.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 2.160357077916464 2.0 True 8.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13751 72.816 34.0 709360.0 25 0 41963.0 + 40569 VKIGVEQFLS 10 61 560.3218664409794 1118.6291799487587 2 560.3226806521416 MULTI CID FTMS 0 0 0 13746 1287395.625 0.9084719673982076 -1 0.131011962890625 5 Unmodified _VKIGVEQFLS_ REV__ENSG00000051341|ENST00000264233|POLQ 2.735195868890462 0.713984610296514 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3 -1 10.458 0.0 0.0 0.93486 0.0 0.0 0.0 775.3723848932249 775.3723848932249 0.4575749056067497 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 0.93486 + + 11 + 1 1.041 24936.9 1.0 8915 4834 13746 HBL1_DMSO_200M_050219_2,13751 HBL1_DMSO_200M_050219_2,13751,VKIGVEQFLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13752 72.817 60.0 955890.0 25 0 194130.0 + 18410 KVVEDGILKL 10 85 557.3477478994736 1112.680942865747 2 557.3480712771416 MULTI CID FTMS 0 0 0 13746 985187.3125 0.4476340732885284 2 -0.2018280029296875 6 Unmodified _KVVEDGILKL_ ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1 44.391923383255 0.1130657680819667 4 KVVED{[VA]|[{I|L}G]}{I|L}K{I|L} 10 0 + 63.601 0.0 0.0 5.716 5.716 71.492 0.0 0.0 0.0 16.53212513775344 0.4346569378109066 0.4346569378109066 0.4346569378109066 0 2.1989700043360187 0.0 0.0 0.3252574989159953 + + KVVED{[VA]|[{I|L}G]}{I|L}K{I|L};KVVED{[VA]|[{I|L}G]}{I|L}{I|L}K 5.716;5.677 +;- + 178 + 1 1.041 48482.9 1.0 8916 4834 13746 HBL1_DMSO_200M_050219_2,13752 HBL1_DMSO_200M_050219_2,13752,KVVEDGILKL True True KVVEDGILKL 72.81725 557.348071277142 37801636.0 13746.0 ENSG00000044115|ENST00000302763|CTNNA1;;nc|ENSG00000044115|P35221-2|CTNNA1 6.376648426055908 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13753 72.819 80.0 1039800.0 25 0 57804.0 -1 0 84 857.9296164380768 1713.8446799429537 2 857.9299804568291 MULTI CID FTMS 0 0 0 13746 828916.25 0.8333920340056293 1 -0.1043167114257812 7 4 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[NS]HH{I|L}Q 15 -1 + 94.478 0.0 0.0 5.5126 5.5126 71.066 0.0 0.0 0.0 71.20637891135594 12.076666314464788 12.076666314464788 0.5799194697768684 0 1.305462187404089 2.0 0.3252574989159953 1.1549471895720984 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[NS]HH{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD{[TV]|[{I|L}S]}G[WC(Carbamidomethyl (C))]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD{[TV]|[{I|L}S]}EHH{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQ[NS]HH{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW{[TV]|[{I|L}S]}G[WC(Carbamidomethyl (C))]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[{I|L}V][WK][CS] 5.5126;5.4788;5.1613;5.1223;5.0884;4.2653 -;-;-;-;-;- 1627 + 1 1.041 61092.8 1.0 8917 4834 13746 HBL1_DMSO_200M_050219_2,13753 HBL1_DMSO_200M_050219_2,13753, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13754 72.821 96.0 835850.0 25 0 89399.0 + 45162 YQFVFHLI 8 98 533.7893368320152 1065.5641207308304 2 533.7890502810478 MULTI CID FTMS 0 0 0 13746 576448.8125 0.1551510656917882 -5 0.5683212280273438 8 Unmodified _YQFVFHLI_ REV__ENSG00000146360|ENST00000275169|GPR6;REV__nc|ENSG00000146360|P46095-2|GPR6 22.4526382665184 0.5719518724627818 4 [YQ]PA 4 -1 33.232 0.0 0.0 3.1187 0.0 0.0 0.0 603.3180025690061 603.3180025690061 11.616136822334369 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 [YQ]PA 3.1187 - 205 + 1 1.041 67599.1 1.0 8918 4834 13746 HBL1_DMSO_200M_050219_2,13754 HBL1_DMSO_200M_050219_2,13754,YQFVFHLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13755 72.825 181.0 461980.0 25 0 20485.0 + 22905 LSDIAFHGRSN 11 108 608.8084385194079 1215.6023241056157 2 608.8079101443291 MULTI CID FTMS 0 0 0 13746 546648.625 1.0 0 0.0 9 Unmodified _LSDIAFHGRSN_ REV__ENSG00000008300|ENST00000164024|CELSR3;REV__nc|ENSG00000008300|Q9NYQ7-2|CELSR3 13.042465956692816 0.7638483625850725 4 DVWTDTV 7 -1 28.585 0.0 0.0 2.3515 0.0 0.0 381.2117734237782 0.0 381.2117734237782 0.0 6.322522680920301 0.0 0.0 0 0.0 0.0 0.7887254899964358 0.0 DVWTDTV 2.3515 - 463 + 1 1.041 65824.0 1.0 8919 4834 13746 HBL1_DMSO_200M_050219_2,13755 HBL1_DMSO_200M_050219_2,13755,LSDIAFHGRSN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13756 72.833 453.0 360990.0 25 0 32981.0 + 45107 YPYPYPHTLY 10 144 657.3142409885264 1312.6139290438527 2 657.3149902224541 MULTI CID FTMS 0 0 0 13746 467005.875 0.2607197127373865 4 -0.404144287109375 10 Unmodified _YPYPYPHTLY_ ENSG00000116221|ENST00000360840|MRPL37 139.54400939418784 0.0001497340696798 4 YPYPYPHT{I|L}Y 10 0 + 92.431 0.0 0.0 7.0418 7.0418 82.244 0.0 0.0 0.0 17.059319556497243 3.309932190414244 3.309932190414244 3.309932190414244 0 2.647940008672037 2.0 1.1549471895720984 0.0 + + YPYPYPHT{I|L}Y;YPYPYPHTY{I|L};YPYPYP[KS]CPV;YPYPYP[WQ]TV;YPYPYP[WQ]S{I|L};YPYPYP[Q{I|L}]C(Carbamidomethyl (C)){I|L};YPYPYP[Q{I|L}]CAV;YPYPYP[Q{I|L}]CG{I|L};YPYP[KS]{M(Oxidation (M))|F}{I|L}CPV;YPYPY[QA]{I|L}CPV 7.0418;6.7896;6.4174;5.9638;5.941;5.6804;5.3082;5.2854;5.1026;5.0419 +;-;-;-;-;-;-;-;-;- + 9111 + 1 1.041 121295.5 1.0 8920 4834 13746 HBL1_DMSO_200M_050219_2,13756 HBL1_DMSO_200M_050219_2,13756,YPYPYPHTLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13757 72.837 225.0 796630.0 25 0 70376.0 + 1265 AILPHLRSL 9 141 340.5505552773756 1018.6298364323268 3 340.5500060915947 MULTI CID FTMS 0 0 0 13746 443161.125 1.0 0 0.0 11 Unmodified _AILPHLRSL_ ENSG00000115524|ENST00000335508|SF3B1 19.62595529434964 0.305431704817896 4 [{I|L}A]{I|L}PH{I|L} 6 3 48.02 0.0 0.0 4.7142 0.0 0.0 0.0 371.20539270572505 371.20539270572505 41.03076880544919 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + [{I|L}A]{I|L}PH{I|L} 4.7142 + + 70 + 1 1.041 146924.1 1.0 8921 4834 13746 HBL1_DMSO_200M_050219_2,13757 HBL1_DMSO_200M_050219_2,13757,AILPHLRSL False True AILPHLRSL 72.836991 340.550006091595 4259262.5 13746.0 ENSG00000115524|ENST00000335508|SF3B1 -0.3865628639856974 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13758 72.841 205.0 833350.0 25 0 76759.0 + 40032 VGFSVRQRR 9 168 552.8230521374122 1103.6315513416243 2 552.8235961794853 MULTI CID FTMS 0 0 0 13746 381392.28125 1.0 0 0.0 12 Unmodified _VGFSVRQRR_ REV__ENSG00000188976|ENST00000327044|NOC2L;REV__ENST00000452600.1_1_2:130987586-130988813:+|nuORF;REV__ENST00000477976.5_1_1:880076-889593:-|nuORF;REV__ENST00000483767.5_1_1:880076-882054:-|nuORF 7.910154910731844 0.6385446671287552 4 VT{M(Oxidation (M))|F}H 4 -1 16.631 0.0 0.0 1.5069 0.0 0.0 234.16580534728683 382.1766146295532 616.34241997684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 VT{M(Oxidation (M))|F}H 1.5069 - 569 + 1 1.041 132332.8 1.0 8922 4834 13746 HBL1_DMSO_200M_050219_2,13758 HBL1_DMSO_200M_050219_2,13758,VGFSVRQRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13759 72.85 492.0 377720.0 25 0 31351.0 + 17836 KQLDDLKVEL 10 177 600.8453419844042 1199.6761310356085 2 600.8451415896416 MULTI CID FTMS 0 0 0 13746 372163.1875 0.0013848510511233 19 -1.9343719482421875 13 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 180.73698731380944 1.7447150221655288e-14 4 {I|L}{M(Oxidation (M))|F}VK{I|L}DD{I|L}Q 9 8 106.86 0.0 0.0 8.9073 0.0 0.0 0.0 125.07251917056875 125.07251917056875 52.767943990997054 0.0 0.0 0.0 0 2.528659694992122 0.0 1.3778623208748888 1.823043607916942 {I|L}{M(Oxidation (M))|F}VK{I|L}DD{I|L}Q 8.9073 - 26223 + 1 1.041 137085.4 1.0 8923 4834 13746 HBL1_DMSO_200M_050219_2,13759 HBL1_DMSO_200M_050219_2,13759,KQLDDLKVEL True True KQLDDLKVEL 72.849625 600.845141589642 9245562624.0 13746.0 ENST00000487431.1_1_9:127620199-127623861:-|nuORF;;ENSG00000136942|ENST00000348462|RPL35;;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;;ENST00000495728.1_1_9:127623696-127624209:-|nuORF;;ENST00000450819.1_1_1:237144684-237145005:+|nuORF 5.768148263295491 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13760 72.859 520.0 218310.0 25 0 15532.0 + 34066 TVIEEHLGKFGV 12 152 664.864887082493 1327.715221231786 2 664.8647338747978 MULTI CID FTMS 0 0 0 13746 353369.75 0.3948728070230576 2 -0.2018280029296875 14 Unmodified _SLLELLSRDWP_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 27.22323531849824 0.4529927607131788 4 {[TV]|[{I|L}S]}{I|L}EEH{I|L}GK{M(Oxidation (M))|F}GV 12 7 + 103.5 0.0 0.0 7.7951 7.7951 94.497 0.0 0.0 0.0 60.779780876944 9.930479595456802 9.930479595456802 16.140078085766078 0 2.8807196863200843 2.0 0.7302046884880937 0.0 {[TV]|[{I|L}S]}{I|L}EEH{I|L}GK{M(Oxidation (M))|F}GV;{[TV]|[{I|L}S]}{I|L}EE[{I|L}P]TQ{I|L}W;{[TV]|[{I|L}S]}{I|L}EE[{I|L}P]QT{I|L}W;{[TV]|[{I|L}S]}{I|L}EE[{I|L}P]TQW{I|L};{[TV]|[{I|L}S]}{I|L}EE[{I|L}P]T[AG]{I|L}W;{[TV]|[{I|L}S]}{I|L}EE[{I|L}P]QTW{I|L};{[TV]|[{I|L}S]}{I|L}EE[{I|L}P][AG]T{I|L}W;{[TV]|[{I|L}S]}{I|L}EE[{I|L}P]T[AG]W{I|L};{[TV]|[{I|L}S]}{I|L}EE[{I|L}P]QP{M(Oxidation (M))|F}GV;{[TV]|[{I|L}S]}{I|L}EE[WK]{I|L}DPV 7.7951;6.5795;6.2798;6.1062;5.892;5.8065;5.5923;5.4187;5.2743;5.1604 -;-;-;-;-;-;-;-;-;- 11221 + 1 1.041 85078.6 1.0 8924 4834 13746 HBL1_DMSO_200M_050219_2,13760 HBL1_DMSO_200M_050219_2,13760,SLLELLSRDWP False False TVIEEHLGKFGV 72.858789 664.864733874798 16247020.0 13746.0 ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000397415.7_1_6:42848808-42854199:+|nuORF 8.065594832102457 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13761 72.868 504.0 428250.0 25 0 28897.0 + 9119 FFPDKPITQY 10 165 628.3200531437147 1254.6255533542294 2 628.3207885622978 MULTI CID FTMS 0 0 0 13746 370279.40625 0.0912339976665416 4 -0.404144287109375 15 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 15.248480904072842 0.5916873121453583 4 [EP]D 3 8 24.181 0.0 0.0 1.9274 0.0 0.0 0.0 910.479544075045 910.479544075045 -1.128792845075548 0.0 -1.128792845075548 0.0 0 0.0 1.5228787452803376 0.0 0.0 [EP]D 1.9274 - 1431 1 1.041 158942.6 1.0 8925 4834 13746 HBL1_DMSO_200M_050219_2,13761 HBL1_DMSO_200M_050219_2,13761,FFPDKPITQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13762 72.881 743.0 424770.0 25 0 37336.0 + -1 TQLMAEAI 8 196 446.7270520114519 891.4395510897039 2 446.7271301150322 MULTI CID FTMS 0 0 0 13746 249093.4375 1.0 0 0.0 16 Oxidation (M) _TQLM(Oxidation (M))AEAI_ REV__ENSG00000116690|ENST00000445192|PRG4;REV__nc|ENSG00000116690|Q92954-2|PRG4;REV__nc|ENSG00000116690|Q92954-3|PRG4;REV__nc|ENSG00000116690|Q92954-4|PRG4;REV__nc|ENSG00000116690|Q92954-5|PRG4;REV__nc|ENSG00000116690|Q92954-6|PRG4 20.453626601364224 0.6087503291685402 4 [DP][HS]{I|L}PN{I|L} 8 -1 [DP][HS]{I|L} + + 26.331 -7.7379 -1.4088 2.9537 2.9537 45.845 0.0 0.0 0.0 0.0 12.034021960761264 0.0 0.0 0 0.5 0.0 0.0 0.566901560044258 [DP][HS]{I|L}PN{I|L} 2.9537 - 637 + 1 1.041 236896.1 1.0 8926 4834 13746 HBL1_DMSO_200M_050219_2,13762 HBL1_DMSO_200M_050219_2,13762,TQLMAEAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13763 72.884 107.0 502300.0 25 0 39068.0 + 26568 NVLHSAFEV 9 92 508.2639999789192 0 508.2636596560478 PEAK CID FTMS 0 0 0 13746 226167.8125 1.0 0 0.0 17 Unmodified _NVLHSAFEV_ ENSG00000104522|ENST00000425753|GFUS;ENST00000531473.5_1_8:144696774-144698909:-|nuORF;ENST00000532308.5_1_8:144696774-144699659:-|nuORF 19.256988751693697 0.2078072434435185 4 {M(Oxidation (M))|F}N 2 8 12.519 0.0 0.0 1.2339 0.0 0.0 246.12448325686336 504.26413904361567 750.388622300479 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {M(Oxidation (M))|F}N 1.2339 - 77 + 1 1.041 49959.3 1.0 8927 4834 13746 HBL1_DMSO_200M_050219_2,13763 HBL1_DMSO_200M_050219_2,13763,NVLHSAFEV False True NVLHSAFEV 72.883985 508.263659656048 762870.125 13746.0 ENSG00000104522|ENST00000425753|GFUS;;ENST00000531473.5_1_8:144696774-144698909:-|nuORF;;ENST00000532308.5_1_8:144696774-144699659:-|nuORF 5.728756586710612 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13764 72.896 683.0 174650.0 25 0 28179.0 + 30523 REKRHIKLVG 10 131 618.3883317480755 0 618.3890258669853 PEAK CID FTMS 0 0 0 13746 221738.140625 0.7526061548572104 -1 0.131011962890625 18 Unmodified _REKRHIKLVG_ REV__ENST00000436126.5_1_2:177043793-177052894:-|nuORF 3.5964929083625545 0.3961065659209837 4 CRTVEDR 7 -1 10.513 0.0 0.0 0.85142 0.0 0.0 274.2799461115822 98.02536188297108 372.3053079945533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.6139829889124311 CRTVEDR 0.85142 - 497 + 1 1.041 90887.8 1.0 8928 4834 13746 HBL1_DMSO_200M_050219_2,13764 HBL1_DMSO_200M_050219_2,13764,REKRHIKLVG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13765 72.909 768.0 261710.0 25 0 19716.0 + 24739 MPELGLRSV 9 218 501.275926980557 1000.537301027914 2 501.2755920290947 MULTI CID FTMS 0 0 0 13746 200515.0 0.4296262163267309 2 -0.2018280029296875 19 Unmodified _MPELGLRSV_ ENSG00000012211|ENST00000599218|PRICKLE3;nc|ENSG00000012211|O43900-2|PRICKLE3 27.22323531849824 0.1848086127304535 4 MPE{I|L}RRS{I|L} 8 3 + 66.218 0.0 0.0 6.6182 6.6182 79.073 0.0 0.0 0.0 25.617968113107075 4.393326938302636 4.393326938302636 2.552725051033072 0 0.6861818737241735 0.9208187539523752 0.5021934810768762 0.0 MPE{I|L}RRS{I|L};MPE{I|L}G[RV]S{I|L};MPE{I|L}RRTV;MPE{I|L}G[RV]TV;MPE{I|L}AART{I|L};MPE{I|L}G{I|L}RSV;MPE{I|L}{[RE]|[WV]}KV;MPEAA{I|L}RT{I|L};MPE[RV]RT{I|L};MPE{I|L}[WK]VV 6.6182;6.3631;6.1791;5.924;4.9774;4.8868;4.5943;4.3757;4.33;4.2343 -;-;-;-;-;+;-;-;-;- + 1565 + 1 1.041 151357.5 1.0 8929 4834 13746 HBL1_DMSO_200M_050219_2,13765 HBL1_DMSO_200M_050219_2,13765,MPELGLRSV False True MPELGLRSV 72.909162 501.275592029095 9332930.0 13746.0 nc|ENSG00000012211|O43900-2|PRICKLE3;;ENSG00000012211|ENST00000599218|PRICKLE3 6.172350565592448 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13766 72.911 91.0 869950.0 25 0 178260.0 + 30380 RALTVPEL 8 77 449.7718453303469 0 449.7721435427666 PEAK CID FTMS 0 0 0 13746 192114.328125 0.7791973795814611 -3 0.3339462280273437 20 Unmodified _RALTVPEL_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3 14.838274106304384 0.487171416001894 4 V 1 7 11.99 0.0 0.0 1.3359 0.0 0.0 357.18917137884245 438.2499483697876 795.43911974863 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + V 1.3359 + + 6 + 1 1.041 68300.1 1.0 8930 4834 13746 HBL1_DMSO_200M_050219_2,13766 HBL1_DMSO_200M_050219_2,13766,RALTVPEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13768 72.915 2.0 30849000.0 25 0 4236100.0 + 15288 IPIPIRTP 8 57 453.7924634572879 0 453.7925598025322 PEAK CID FTMS 0 0 0 13767 28814534.0 0.8884295161068725 1 -0.0975112915039062 1 Unmodified _IPIPIRTP_ REV__ENSG00000187048|ENST00000310638|CYP4A11 25.399314129420983 0.3159236278339657 4 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 6 -1 22.14 0.0 0.0 2.4449 0.0 0.0 113.08405223662768 66.03572260074452 179.11977483737218 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 2.4449 - 33 + 1 1.041 53421.1 1.0 8931 4835 13767 HBL1_DMSO_200M_050219_2,13768 HBL1_DMSO_200M_050219_2,13768,IPIPIRTP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13769 72.917 7.0 6423800.0 25 0 548100.0 + 41566 VPPEILNNV 9 81 497.7825498997915 993.550546866383 2 497.7822753787041 MULTI CID FTMS 0 0 0 13767 8537371.0 1.0 0 0.0 2 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 28.486842064014134 0.1687311288560894 4 [EP]{I|L}PVQD 7 6 29.257 0.0 0.0 2.9447 0.0 0.0 0.0 212.13639826702675 212.13639826702675 4.362591709212182 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 [EP]{I|L}PVQD 2.9447 - 275 1 1.041 39178.1 1.0 8932 4835 13767 HBL1_DMSO_200M_050219_2,13769 HBL1_DMSO_200M_050219_2,13769,VPPEILNNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13770 72.918 9.3 5468100.0 25 0 1008700.0 + 13541 HPFEAQTLI 9 78 528.2801175504819 1054.5456821677635 2 528.2803832888603 MULTI CID FTMS 0 0 0 13767 5644927.5 1.0 0 0.0 3 Unmodified _HPFEAQTLI_ ENSG00000136045|ENST00000412830|PWP1 47.594388314883695 0.0456443387682827 4 AQT{I|L}{I|L} 5 4 46.058 0.0 0.0 4.3675 0.0 0.0 510.22264296699376 0.0 510.22264296699376 0.0 9.35841185485451 0.0 0.0 0 0.8494850021680094 0.0 0.5 0.0 + AQT{I|L}{I|L} 4.3675 + + 125 1 1.041 50375.6 1.0 8933 4835 13767 HBL1_DMSO_200M_050219_2,13770 HBL1_DMSO_200M_050219_2,13770,HPFEAQTLI True True HPFEAQTLI 72.91771 528.28038328886 94232704.0 13767.0 ENSG00000136045|ENST00000412830|PWP1 7.006230354309082 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13771 72.919 12.0 4445200.0 25 0 463520.0 + 2275 AQGGVLPNI 9 83 434.7482694486962 867.4819859641924 2 434.7480651736259 MULTI CID FTMS 0 0 0 13767 5204674.0 0.9445757042271096 1 -0.0975112915039062 4 Unmodified _AQGGVLPNI_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000454426.1_1_6:25882256-25882391:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 57.47134341890925 0.0274820932774257 4 [QA]AAA{I|L}PN{I|L} 9 3 [QA]AAA + + 34.112 9.4539 2.2935 3.9323 3.9323 48.491 0.0 0.0 0.0 0.0 16.462053328752823 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.6861818737241735 [QA]AAA{I|L}PN{I|L} 3.9323 - 159 + 1 1.041 49171.2 1.0 8934 4835 13767 HBL1_DMSO_200M_050219_2,13771 HBL1_DMSO_200M_050219_2,13771,AQGGVLPNI True True AQGGVLPNI 72.918889 434.748065173626 176412768.0 13767.0 ENSG00000196747|ENST00000358739|H2AC13;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000276903|ENST00000613174|H2AC16;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000274997|ENST00000377459|H2AC12;;ENST00000454426.1_1_6:25882256-25882391:-|nuORF;;ENSG00000184270|ENST00000331128|H2AC21;;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;;ENSG00000180573|ENST00000377791|H2AC6;;nc|ENSG00000246705|Q9BTM1-2|H2AJ;;ENSG00000246705|ENST00000544848|H2AJ 4.002744992574056 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13772 72.92 19.0 2196400.0 25 0 454710.0 + 5212 DIVYIKGKPT 10 62 567.3299654973393 1132.6453780614786 2 567.3300659060478 MULTI CID FTMS 0 0 0 13767 3108936.75 0.8212675779338426 -2 0.2353286743164062 5 Unmodified _DIVYIKGKPT_ REV__ENSG00000105339|ENST00000519811|DENND3;REV__nc|ENSG00000105339|A2RUS2-2|DENND3;REV__nc|ENSG00000105339|A2RUS2|DENND3 3.5964929083625545 0.7100006075494749 4 V 1 -1 10.181 0.0 0.0 0.89887 0.0 0.0 1015.5656946892116 0.0 1015.5656946892116 0.0 7.7068107548717535 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.89887 + + 11 + 1 1.041 36527.9 1.0 8935 4835 13767 HBL1_DMSO_200M_050219_2,13772 HBL1_DMSO_200M_050219_2,13772,DIVYIKGKPT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13773 72.921 26.0 2247900.0 25 0 252300.0 + 22324 LPSHGVPLI 9 84 466.7820194832304 931.5494860332608 2 466.7819091677666 MULTI CID FTMS 0 0 0 13767 2214556.25 0.1318967534032309 3 -0.2998275756835937 6 Unmodified _LPSHGVPLI_ ENSG00000089053|ENST00000261819|ANAPC5;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;nc|ENSG00000089053|Q9UJX4-3|ANAPC5 50.855029805455786 0.0384952370514206 4 [{I|L}P][HS]GVP{I|L}{I|L} 9 0 + 59.253 0.0 0.0 6.3607 6.3607 91.398 0.0 0.0 0.0 15.39619852429992 27.55346964095841 15.39619852429992 27.60696766396192 0 1.305462187404089 2.0 0.2887254899964357 0.0 + + [{I|L}P][HS]GVP{I|L}{I|L};[{I|L}P][TP]HAA{I|L}{I|L};[{I|L}P][TP]H{I|L}AA{I|L};[{M(Oxidation (M))|F}V][W{I|L}]AA{I|L}{I|L} 6.3607;3.3971;2.4762;0.87789 +;-;-;- + 405 1 1.041 50706.1 1.0 8936 4835 13767 HBL1_DMSO_200M_050219_2,13773 HBL1_DMSO_200M_050219_2,13773,LPSHGVPLI True True LPSHGVPLI 72.921245 466.781909167767 454643760.0 13767.0 nc|ENSG00000089053|Q9UJX4-3|ANAPC5;;ENST00000535641.5_1_12:121746285-121765135:-|nuORF;;ENST00000422342.2_1_12:121746285-121747708:-|nuORF;;ENSG00000089053|ENST00000261819|ANAPC5 3.0214871565500894 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13774 72.923 52.0 1213200.0 25 0 180300.0 13152 HFLEKLTIS 9 81 544.3091277453768 1086.6037025575536 2 544.3090087771416 MULTI CID FTMS 0 0 0 13767 1168423.25 0.8985597970359613 1 -0.0975112915039062 7 Unmodified _HFLEKLTIS_ ENSG00000144406|ENST00000673920|UNC80;ENST00000489023.5_1_2:210693994-210832362:+|nuORF;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80 3.944395688203298 0.7769873103969335 4 {I|L} 1 8 10.969 0.0 0.0 1.0095 0.0 0.0 955.508760396224 0.0 955.508760396224 0.0 -5.484550065040281 -5.484550065040281 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0095 + + 10 + 1 1.041 54694.2 1.0 8937 4835 13767 HBL1_DMSO_200M_050219_2,13774 HBL1_DMSO_200M_050219_2,13774,HFLEKLTIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13775 72.924 68.0 892350.0 25 0 31479.0 + 18652 VPYEIQKGQALI 12 90 679.8873001661174 1357.7600473990346 2 679.8876830935478 MULTI CID FTMS 0 0 0 13767 1024043.9375 0.1833161757769166 -3 0.3340606689453125 8 Unmodified _LAGVFRLFHWL_ ENSG00000123609|ENST00000243346|NMI;ENST00000491771.5_1_2:152135291-152146334:-|nuORF 25.399314129420983 0.4958189927824775 4 VPYE{I|L}Q 6 10 84.047 0.0 0.0 6.1901 0.0 0.0 0.0 625.3675020807249 625.3675020807249 13.297570769937622 0.0 0.0 0.0 0 2.1549471895720984 2.0 0.0 0.6747425010840047 VPYE{I|L}Q 6.1901 - 4190 + 1 1.041 47612.8 1.0 8938 4835 13767 HBL1_DMSO_200M_050219_2,13775 HBL1_DMSO_200M_050219_2,13775,LAGVFRLFHWL False False VPYEIQKGQALI 72.924253 679.887683093548 179019228.0 13767.0 ENSG00000123609|ENST00000243346|NMI;;ENST00000491771.5_1_2:152135291-152146334:-|nuORF 7.703814506530762 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13776 72.926 74.0 855630.0 25 0 99642.0 22382 LPSSSPVPIPV 11 83 546.8172236951062 1091.6198944570124 2 546.8153564333916 MULTI CID FTMS 0 0 0 13767 690338.0 0.9441099841947552 1 -0.0975112915039062 9 Unmodified _LPSSSPVPIPV_ ENSG00000110497|ENST00000683756|AMBRA1;nc|ENSG00000110497|Q9C0C7-2|AMBRA1;nc|ENSG00000110497|Q9C0C7-3|AMBRA1;nc|ENSG00000110497|Q9C0C7-4|AMBRA1;nc|ENSG00000110497|Q9C0C7-5|AMBRA1 36.12702656103203 0.2720571796884491 4 [{I|L}P]P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VPP{I|L}V 10 6 + 72.88 0.0 0.0 6.6763 6.6763 80.213 0.0 0.0 0.0 24.25968732272281 54.18366291575822 24.25968732272281 3.0102999566398125 0 1.0 1.6989700043360187 0.3494850021680094 0.0 [{I|L}P]P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VPP{I|L}V;[{I|L}P]P[QT]MPP{I|L}V;[{I|L}P]{[SA]|[TG]}{[CP]|[EA]}VPP{I|L}V;[{I|L}P]P[QT]PMP{I|L}V;{[HG]|PP}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VPP{I|L}V;{[HG]|PP}{I|L}[QT]MPP{I|L}V;[{I|L}P]{[SA]|[TG]}[HK]MP{I|L}V;[{I|L}P]P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[RH]{I|L}V;{[HG]|PP}{I|L}[QT]PMP{I|L}V;{[HG]|PP}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[RH]{I|L}V 6.6763;6.4006;5.561;5.1853;4.4071;4.1314;3.7434;3.3998;2.9161;1.1306 -;-;-;-;-;-;-;-;-;- 331 1 1.041 55812.6 1.0 8939 4835 13767 HBL1_DMSO_200M_050219_2,13776 HBL1_DMSO_200M_050219_2,13776,LPSSSPVPIPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13777 72.93 182.0 724270.0 25 0 139560.0 18076 KTEVTIII 8 127 458.7880193260251 915.5614857188502 2 458.7878906130791 MULTI CID FTMS 0 0 0 13767 539212.3125 0.1490034104615166 -4 0.438262939453125 10 Unmodified _KTEVTIII_ ENSG00000079691|ENST00000329474|CARMIL1;nc|ENSG00000079691|Q5VZK9-2|CARMIL1 8.593279151180031 0.7721714526254883 4 {I|L} 1 7 12.764 0.0 0.0 1.3941 0.0 0.0 784.46639096963 0.0 784.46639096963 0.0 4.1807159868066535 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3941 + + 136 + 1 1.041 104867.7 1.0 8940 4835 13767 HBL1_DMSO_200M_050219_2,13777 HBL1_DMSO_200M_050219_2,13777,KTEVTIII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13778 72.932 142.0 677210.0 25 0 26725.0 + 22583 LPYAMKPIDY 10 105 605.8127135396716 1209.610874146143 2 605.8123046755791 MULTI CID FTMS 0 0 0 13767 503765.71875 0.4408994626336237 -1 0.1043167114257812 11 Unmodified _LPYAMKPIDY_ ENSG00000147383|ENST00000370274|NSDHL 93.16586880292088 0.0091067182461363 4 {I|L}PYAMKP{I|L}DY 10 0 + 104.18 0.0 0.0 8.6127 8.6127 96.094 0.0 0.0 0.0 56.555781609639766 13.521825181113629 13.521825181113629 17.51979729363555 0 2.615356566548286 2.0 0.8921590589602533 0.0 + + {I|L}PYAMKP{I|L}DY;{I|L}PYAMK[{M(Oxidation (M))|F}V]{[QN]|[E{I|L}]|[KN]};{I|L}PYAM[R{I|L}]M{[ES]|[DT]|[{I|L}C]};[{I|L}P]YAMKP{I|L}{[YD]|[{M(Oxidation (M))|F}M]};{I|L}PY[{M(Oxidation (M))|F}V]KMA{[QN]|[E{I|L}]|[KN]};{I|L}PY[YG][TA]{I|L}A{[QN]|[E{I|L}]|[KN]};{I|L}PY[{M(Oxidation (M))|F}V]KMP{[ES]|[DT]|[{I|L}C]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AMKP{I|L}{[YD]|[{M(Oxidation (M))|F}M]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}MKP{I|L}{[YD]|[{M(Oxidation (M))|F}M]};{I|L}PY[YG][TA]{I|L}P{[ES]|[DT]|[{I|L}C]} 8.6127;7.1643;5.7132;5.3763;5.0026;4.7616;4.7537;4.7141;4.6952;4.5127 +;-;-;+;-;-;-;-;-;- + 1542 + 1 1.041 75105.5 1.0 8941 4835 13767 HBL1_DMSO_200M_050219_2,13778 HBL1_DMSO_200M_050219_2,13778,LPYAMKPIDY True True LPYAMKPIDY 72.932364 605.812304675579 9682167.0 13767.0 ENSG00000147383|ENST00000370274|NSDHL 8.724786758422852 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13779 72.936 210.0 648970.0 25 0 73395.0 + + 18798 LAPIGIRV 8 100 419.7794029302962 837.5442529273926 2 419.7790405154228 MULTI CID FTMS 0 0 0 13767 427822.125 0.4840936898587235 -1 0.1043167114257812 12 Unmodified _LAPVLLGR_ ENSG00000072506|ENST00000168216|HSD17B10 24.67388899826682 0.525179942228231 4 [{I|L}A]P{I|L}VARV 8 -1 + 52.063 0.0 0.0 6.2161 6.2161 83.704 0.0 0.0 0.0 27.62570411207953 4.887244160390161 4.887244160390161 6.989700043360188 0 0.5994850021680094 1.6989700043360187 0.0 0.0 [{I|L}A]P{I|L}VARV;[{I|L}A]PV{I|L}ARV;[{I|L}A]VP{I|L}ARV 6.2161;5.3816;4.6947 -;-;- 104 + 1 1.041 108847.8 1.0 8942 4835 13767 HBL1_DMSO_200M_050219_2,13779 HBL1_DMSO_200M_050219_2,13779,LAPVLLGR False False LAPIGIRV 72.936341 419.779040515423 7027089.5 13767.0 ENSG00000072506|ENST00000168216|HSD17B10 1.624054988225301 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13780 72.944 454.0 432360.0 25 0 32590.0 + 25143 MQLEDLKQQL 10 178 623.3287949481862 1244.6430369631723 2 623.3292114138603 MULTI CID FTMS 0 0 0 13767 408109.09375 0.8909474032646513 -1 0.1043167114257812 13 Unmodified _MQLEDLKQQL_ ENSG00000269335|ENST00000594239|IKBKG;nc|ENSG00000269335|Q9Y6K9-2|IKBKG 121.3458533713876 0.000430218257633 4 {[QN]|[E{I|L}]|[KN]}QKD{I|L}Q[Q{I|L}]M 10 5 + 60.082 0.0 0.0 4.8272 4.8272 70.12 0.0 0.0 0.0 3.1376408576448966 7.307433505659873 3.1376408576448966 1.7140151069450908 0 0.3807196863200844 0.7958800173440752 1.2912359745699709 1.1758337024346173 {[QN]|[E{I|L}]|[KN]}QKD{I|L}Q[Q{I|L}]M;{[QN]|[E{I|L}]|[KN]}D{I|L}KQQ[Q{I|L}]M;{[QN]|[E{I|L}]|[KN]}DKQ{I|L}Q[Q{I|L}]M;[Q{I|L}]EKD{I|L}Q[Q{I|L}]M;{[QN]|[E{I|L}]|[KN]}QK{I|L}DQ[Q{I|L}]M;{[QN]|[E{I|L}]|[KN]}DK{I|L}QQ[Q{I|L}]M;{[QN]|[E{I|L}]|[KN]}QKD{I|L}[AG][Q{I|L}]M;{[QN]|[E{I|L}]|[KN]}[AG]KD{I|L}Q[Q{I|L}]M;[AG]{I|L}EKD{I|L}Q[Q{I|L}]M;{[QN]|[E{I|L}]|[KN]}D{I|L}K[AG]Q[Q{I|L}]M 4.8272;4.6895;4.5485;4.4435;4.2016;4.1647;4.0909;4.0909;4.0728;3.9532 -;-;-;-;-;-;-;-;-;- 6602 1 1.041 143368.1 1.0 8943 4835 13767 HBL1_DMSO_200M_050219_2,13780 HBL1_DMSO_200M_050219_2,13780,MQLEDLKQQL True True MQLEDLKQQL 72.944418 623.32921141386 3738982.75 13767.0 nc|ENSG00000269335|Q9Y6K9-2|IKBKG;;ENSG00000269335|ENST00000594239|IKBKG 6.228301843007405 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13781 72.953 461.0 273760.0 25 0 42325.0 41088 VNISASFRRK 10 144 589.3429844827069 1176.6714160322138 2 589.3427001833916 MULTI CID FTMS 0 0 0 13767 403561.53125 0.382273123287256 3 -0.2998275756835937 14 Unmodified _VNISASFRRK_ ENSG00000145882|ENST00000274569|PCYOX1L;ENST00000503240.5_1_5:148743537-148748214:+|nuORF;ENST00000505669.5_1_5:148737686-148748214:+|nuORF 5.731851221503515 0.7001233259664787 4 {I|L} 1 9 10.713 0.0 0.0 0.91048 0.0 0.0 1045.5762602478371 0.0 1045.5762602478371 0.0 0.117405479247612 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.91048 + + 163 + 1 1.041 98794.8 1.0 8944 4835 13767 HBL1_DMSO_200M_050219_2,13781 HBL1_DMSO_200M_050219_2,13781,VNISASFRRK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13782 72.962 516.0 688110.0 25 0 50393.0 + 21502 LPIANVARI 9 190 483.808768723897 965.602984514594 2 483.8085815310478 MULTI CID FTMS 0 0 0 13767 396235.84375 0.8179019459214617 -2 0.2353286743164062 15 Unmodified _LPIANVARI_ ENSG00000120837|ENST00000240055|NFYB 97.07464715276576 0.0121042244793311 4 {I|L}P{I|L}ANTPK{I|L} 9 3 + 96.468 0.0 0.0 9.9904 9.9904 84.711 0.0 0.0 0.0 74.45437676146852 7.680991966678562 7.680991966678562 2.40270483492408 0 1.1505149978319906 2.0 0.0 1.201163485412895 {I|L}P{I|L}ANTPK{I|L};{I|L}P{I|L}GQTPK{I|L};{I|L}P{I|L}ANVAR{I|L};{I|L}PG{I|L}QTPK{I|L};{I|L}P{I|L}AGGTPK{I|L};{I|L}P{I|L}GQVAR{I|L};{I|L}P{I|L}G[AG]TPK{I|L};{I|L}P{I|L}AGGVAR{I|L};{I|L}{I|L}PANTPK{I|L};{I|L}P{I|L}AN[{I|L}V]QV 9.9904;9.7416;9.5866;9.0797;9.0368;8.9758;8.788;8.6329;8.4714;8.3864 -;-;+;-;-;-;-;-;-;- + 3396 + 1 1.041 270361.1 1.0 8945 4835 13767 HBL1_DMSO_200M_050219_2,13782 HBL1_DMSO_200M_050219_2,13782,LPIANVARI True True LPIANVARI 72.96168 483.808581531048 13154621.0 13767.0 ENSG00000120837|ENST00000240055|NFYB 3.877906322479248 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13783 72.964 104.0 692560.0 25 0 45993.0 + 5534 DMHAFVTEV 9 119 524.7420977667903 1047.4696426003804 2 524.7429687380791 MULTI CID FTMS 0 0 0 13767 376083.40625 0.4810711773076861 -2 0.2353286743164062 16 Unmodified _DMHAFVTEV_ ENSG00000116906|ENST00000366647|GNPAT;ENST00000492459.1_1_1:231402025-231403654:+|nuORF;nc|ENSG00000116906|O15228-2|GNPAT 46.020951573049366 0.0490941689151868 4 [{M(Oxidation (M))|F}V]TV{M(Oxidation (M))|F}A 6 7 42.751 0.0 0.0 4.0814 0.0 0.0 0.0 380.1042191696707 380.1042191696707 24.12340288297237 0.0 0.0 0.0 0 0.5866968715561641 1.0457574905606752 0.5 0.0 [{M(Oxidation (M))|F}V]TV{M(Oxidation (M))|F}A 4.0814 - 242 + 1 1.041 66509.1 1.0 8946 4835 13767 HBL1_DMSO_200M_050219_2,13783 HBL1_DMSO_200M_050219_2,13783,DMHAFVTEV True True DMHAFVTEV 72.963901 524.742968738079 6165671.5 13767.0 ENSG00000116906|ENST00000366647|GNPAT;;nc|ENSG00000116906|O15228-2|GNPAT;;ENST00000492459.1_1_1:231402025-231403654:+|nuORF 8.593580881754557 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13784 72.973 504.0 607680.0 25 0 52552.0 + 30401 RASPSLLQPRP 11 154 611.3558527162176 1220.697152499235 2 611.3546630740166 MULTI CID FTMS 0 0 0 13767 334110.625 0.319340431486553 -11 1.178497314453125 17 Unmodified _RASPSLLQPRP_ REV__ENST00000286371.7_1_3:141595515-141595647:+|nuORF 12.240655878213236 0.7805268987462184 4 [EP]WVV 5 -1 29.335 0.0 0.0 2.4032 0.0 0.0 0.0 607.3549033139412 607.3549033139412 12.239704346135731 0.0 0.0 0.0 0 0.3807196863200844 0.958607314841775 0.0 0.0 [EP]WVV 2.4032 - 351 1 1.041 221835.3 1.0 8947 4835 13767 HBL1_DMSO_200M_050219_2,13784 HBL1_DMSO_200M_050219_2,13784,RASPSLLQPRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13785 72.984 592.0 343250.0 25 0 15240.0 -1 0 141 864.9376938054527 1727.8608346777053 2 865.4382202029228 MULTI CID FTMS 0 0 0 13767 250160.828125 0.5043288325092543 -1 0.1043167114257812 18 4 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQRDG{M(Oxidation (M))|F}{I|L}Q 15 -1 + 136.64 0.0 0.0 7.9083 7.9083 90.514 0.0 0.0 0.0 27.617608341954764 15.674843167863926 15.674843167863926 9.030899869919452 0 2.6237125054200234 2.0 1.055462187404089 1.613364334130467 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQRDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEA[AG]RDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NEAQRDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGEAQRDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}GGEAQRDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NEA[AG]RDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NEAQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEA[AG][VG]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGEA[AG]RDG{M(Oxidation (M))|F}{I|L}Q 7.9083;7.3857;7.3857;7.3857;7.3857;6.864;6.864;6.864;6.864;6.864 -;-;-;-;-;-;-;-;-;- 10713 + 1 1.041 137583.9 1.0 8948 4835 13767 HBL1_DMSO_200M_050219_2,13785 HBL1_DMSO_200M_050219_2,13785, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13786 72.998 780.0 159600.0 25 0 19013.0 + 33690 SIYREFERL 9 147 404.8836712616645 1211.6291843851936 3 404.8841735720634 MULTI CID FTMS 0 0 0 13767 229510.46875 1.0 0 0.0 19 Unmodified _SIYREFERL_ ENSG00000008294|ENST00000262013|SPAG9;ENSG00000138834|ENST00000610761|MAPK8IP3;nc|ENSG00000008294|O60271-2|SPAG9;nc|ENSG00000008294|O60271-3|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-5|SPAG9;nc|ENSG00000138834|Q9UPT6-2|MAPK8IP3;nc|ENSG00000138834|Q9UPT6|MAPK8IP3 28.23362336080872 0.1719529537093671 4 S{I|L}YRDV{M(Oxidation (M))|F}{I|L}S{I|L} 10 4 + 64.334 0.0 0.0 5.3097 5.3097 75.588 0.0 0.0 0.0 33.23645349902641 3.424226808222066 3.424226808222066 3.424226808222066 0 0.6677353201839438 2.0 0.3494850021680094 0.3807196863200844 S{I|L}YRDV{M(Oxidation (M))|F}{I|L}S{I|L};S{I|L}YRDV{M(Oxidation (M))|F}{I|L}TV;S{I|L}YRQ[YN]R{I|L};S{I|L}YR[{M(Oxidation (M))|F}E]ER{I|L};S{I|L}YR[C(Carbamidomethyl (C))K][VS]S{I|L};S{I|L}YRQ[YN]{I|L}R;S{I|L}YR[{M(Oxidation (M))|F}E]E{I|L}R;S{I|L}YR[C(Carbamidomethyl (C))K][VS]TV;S{I|L}Y[VG]DV{M(Oxidation (M))|F}{I|L}S{I|L};S{I|L}Y[VG]Q[YN]R{I|L} 5.3097;5.0271;4.7531;4.65;4.5933;4.5047;4.4016;4.3107;4.2391;3.9932 -;-;-;+;-;-;-;-;-;- + 355 + 1 1.041 103200.7 1.0 8949 4835 13767 HBL1_DMSO_200M_050219_2,13786 HBL1_DMSO_200M_050219_2,13786,SIYREFERL False True SIYREFERL 72.997849 404.884173572063 1731720.125 13767.0 nc|ENSG00000008294|O60271-4|SPAG9;;nc|ENSG00000008294|O60271-3|SPAG9;;ENSG00000138834|ENST00000610761|MAPK8IP3;;nc|ENSG00000138834|Q9UPT6|MAPK8IP3;;ENSG00000008294|ENST00000262013|SPAG9;;nc|ENSG00000008294|O60271-5|SPAG9;;nc|ENSG00000008294|O60271-2|SPAG9;;nc|ENSG00000138834|Q9UPT6-2|MAPK8IP3 4.286484003067017 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13787 73.009 621.0 239870.0 25 0 75568.0 -1 0 127 653.3811673117863 652.3738908451862 1 653.3801757693291 MULTI CID FTMS 0 0 0 13767 163036.796875 0.9963103207229028 1 -0.0975112915039062 20 4 HV 2 -1 14.068 0.0 0.0 2.1564 0.0 0.0 0.0 413.2194918268188 413.2194918268188 1.886583479801104 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HV 2.1564 - 158 + 1 1.041 110523.3 1.0 8950 4835 13767 HBL1_DMSO_200M_050219_2,13787 HBL1_DMSO_200M_050219_2,13787, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13789 73.013 18.0 2602700.0 25 0 355070.0 + 38902 TVLEEIGNRV 10 58 565.3143248095537 1128.6140966859073 2 565.3144409060478 MULTI CID FTMS 0 0 0 13788 2437479.25 0.295523314108494 2 -0.2023162841796875 1 Unmodified _TVLEEIGNRV_ ENSG00000157456|ENST00000288207|CCNB2;ENST00000561077.1_1_15:59397440-59406659:+|nuORF 28.49450938151212 0.328477364964909 4 {[TV]|[{I|L}S]}{I|L}EE{I|L}VME 9 4 73.215 0.0 0.0 6.4871 0.0 0.0 0.0 82.0670412652953 82.0670412652953 62.7572801741327 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.7134679910804405 0.0 {[TV]|[{I|L}S]}{I|L}EE{I|L}VME 6.4871 - 125 + 1 1.035 44975.4 1.0 8951 4836 13788 HBL1_DMSO_200M_050219_2,13789 HBL1_DMSO_200M_050219_2,13789,TVLEEIGNRV False True TVLEEIGNRV 73.012865 565.314440906048 115951360.0 13788.0 ENSG00000157456|ENST00000288207|CCNB2;;ENST00000561077.1_1_15:59397440-59406659:+|nuORF 6.524869918823242 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13790 73.014 40.0 938070.0 25 0 63640.0 -1 0 60 959.113057108936 2874.3173419270083 3 959.4488403201104 MULTI CID FTMS 0 0 0 13788 2194658.75 0.6912842822632891 1 -0.0665283203125 2 4 [NP]{I|L}NWV{[WN]|[YH]}HP 10 -1 26.621 0.0 0.0 0.92617 0.0 0.0 0.0 1613.6864574878084 1613.6864574878084 19.54271738845504 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 [NP]{I|L}NWV{[WN]|[YH]}HP 0.92617 - 261 1 1.035 35514.7 1.0 8952 4836 13788 HBL1_DMSO_200M_050219_2,13790 HBL1_DMSO_200M_050219_2,13790, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13791 73.015 15.0 2980000.0 25 0 431450.0 -1 TNIYQMPIM 9 80 563.7671727838999 1125.5197926345998 2 563.7673828005791 MULTI CID FTMS 0 0 0 13788 3935541.5 1.0 0 0.0 3 Oxidation (M) _TNIYQM(Oxidation (M))PIM_ ENST00000378578.8_1_X:37699060-37699132:-|nuORF 29.081581746732265 0.1611639662936252 4 {[QS]|[NT]}{I|L}YP 5 -1 31.206 0.0 0.0 2.7726 0.0 0.0 0.0 534.2096479414935 534.2096479414935 4.2951097132083405 0.0 0.0 0.0 0 1.0 0.0 0.25 0.5774509799928715 {[QS]|[NT]}{I|L}YP 2.7726 - 97 1 1.035 39267.1 1.0 8953 4836 13788 HBL1_DMSO_200M_050219_2,13791 HBL1_DMSO_200M_050219_2,13791,TNIYQMPIM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13792 73.016 17.0 3167800.0 25 0 395400.0 + 41830 VPYEKGFAL 9 72 512.2796540513847 1022.5447551695694 2 512.2791015505791 MULTI CID FTMS 0 0 0 13788 3145384.0 1.0 0 0.0 4 Unmodified _VPYEKGFAL_ ENSG00000111144|ENST00000228740|LTA4H;ENST00000548375.5_1_12:96405582-96408866:-|nuORF;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-3|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H 30.63653989081413 0.1413794767160703 4 VPYE 4 5 56.23 0.0 0.0 5.499 0.0 0.0 0.0 531.2954805963499 531.2954805963499 9.983105537896009 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3494850021680094 0.0 + VPYE 5.499 + + 364 + 1 1.035 49941.8 1.0 8954 4836 13788 HBL1_DMSO_200M_050219_2,13792 HBL1_DMSO_200M_050219_2,13792,VPYEKGFAL False True VPYEKGFAL 73.016415 512.279101550579 61098020.0 13788.0 ENST00000548375.5_1_12:96405582-96408866:-|nuORF;;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;;nc|ENSG00000111144|P09960-4|LTA4H;;nc|ENSG00000111144|P09960-2|LTA4H;;nc|ENSG00000111144|P09960-3|LTA4H;;ENSG00000111144|ENST00000228740|LTA4H 8.887314955393473 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13793 73.018 39.0 2954300.0 25 0 428750.0 + 29202 QGIPIPEV 8 69 852.4833265689183 851.4760501023183 1 852.4836913943291 MULTI CID FTMS 0 0 0 13788 2685333.5 0.5360406645639582 2 -0.2023162841796875 5 Unmodified _QGIPIPEV_ REV__ENSG00000112981|ENST00000265191|NME5 32.30548876998284 0.3644845974844379 4 [{I|L}P]NA{I|L}PEV 8 -1 + 53.933 0.0 0.0 6.3341 6.3341 77.043 0.0 0.0 0.0 10.0 16.40978057358332 10.0 1.972805581256196 0 0.5 1.3010299956639813 0.3807196863200844 0.0 [{I|L}P]NA{I|L}PEV;[{I|L}P]GGA{I|L}PEV;[{I|L}P]GQ{I|L}PEV;[{I|L}P]AN{I|L}PEV;[NP]{I|L}A{I|L}PEV;[{I|L}P]N{I|L}APEV;[{I|L}P]GG{I|L}APEV;[NP]A{I|L}{I|L}PEV;[{I|L}P]AGG{I|L}PEV;[{I|L}P]GVAAPEV 6.3341;6.1024;5.6951;5.627;5.1596;5.111;4.8793;4.8061;4.5392;4.412 -;-;-;-;-;-;-;-;-;- 417 1 1.035 82481.3 1.0 8955 4836 13788 HBL1_DMSO_200M_050219_2,13793 HBL1_DMSO_200M_050219_2,13793,QGIPIPEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13794 73.019 42.0 1544900.0 25 0 139370.0 + 13996 HYYSITINY 9 107 587.2828846082206 1172.551216283241 2 587.2826415896416 MULTI CID FTMS 0 0 0 13788 1488739.5 0.8673212670203896 1 -0.0665283203125 6 Unmodified _HYYSITINY_ ENSG00000115233|ENST00000409682|PSMD14;ENST00000477232.5_1_2:162241962-162267908:+|nuORF 67.34385681178166 0.0221257235307089 4 {[WN]|[YH]}YS{I|L}T{I|L}NY 9 0 + 56.282 0.0 0.0 4.8 4.8 74.379 0.0 0.0 0.0 19.366130211356065 24.9215250573674 19.366130211356065 3.99166239860314 0 0.2742275032520141 1.2218487496163564 1.1989700043360187 0.0 + + {[WN]|[YH]}YS{I|L}T{I|L}NY;{[WN]|[YH]}YS{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[YC(Carbamidomethyl (C))]{I|L}T{I|L}NY;{[QV]|[N{I|L}]|[RA]|[KV]}[YC(Carbamidomethyl (C))]{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F} 4.8;4.4595;1.188;0.84757 +;-;-;- + 439 1 1.035 54612.6 1.0 8956 4836 13788 HBL1_DMSO_200M_050219_2,13794 HBL1_DMSO_200M_050219_2,13794,HYYSITINY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13795 73.02 57.0 966690.0 25 0 142140.0 + 11788 GLLLTRHRNA 10 89 575.8430692907657 1149.6715856483313 2 575.8433715701103 MULTI CID FTMS 0 0 0 13788 1464285.5 1.0 0 0.0 7 Unmodified _GLLLTRHRNA_ REV__ENST00000526387.5_1_11:67177262-67177541:+|nuORF 3.5964929083625545 0.7100006075494749 4 [YT][{M(Oxidation (M))|F}E]Y{I|L} 6 -1 11.699 0.0 0.0 1.0176 0.0 0.0 0.0 330.2821562872563 330.2821562872563 2.095016772753312 0.0 0.0 0.0 0 0.0 0.958607314841775 0.5 0.0 [YT][{M(Oxidation (M))|F}E]Y{I|L} 1.0176 - 54 1 1.035 46170.7 1.0 8957 4836 13788 HBL1_DMSO_200M_050219_2,13795 HBL1_DMSO_200M_050219_2,13795,GLLLTRHRNA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13796 73.022 50.0 1636800.0 25 0 317490.0 + 16285 IVWQEDPRL 9 90 578.3126431514747 1154.6107333697494 2 578.3118163943291 MULTI CID FTMS 0 0 0 13788 1096463.25 0.5511459123514166 -2 0.2018280029296875 8 Unmodified _IVWQEDPRL_ ENSG00000198000|ENST00000442668|NOL8;ENST00000463593.6_1_9:95061133-95062278:-|nuORF;ENST00000544867.5_1_9:95060120-95062368:-|nuORF;nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8 27.628801355627647 0.1796483985696185 4 {I|L}VWQ[WK]Q 7 5 61.515 0.0 0.0 5.3278 0.0 0.0 0.0 183.05719934635 183.05719934635 48.41592278318394 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.805462187404089 {I|L}VWQ[WK]Q 5.3278 - 144 + 1 1.035 66484.5 1.0 8958 4836 13788 HBL1_DMSO_200M_050219_2,13796 HBL1_DMSO_200M_050219_2,13796,IVWQEDPRL False True IVWQEDPRL 73.021601 578.311816394329 16969958.0 13788.0 ENST00000463593.6_1_9:95061133-95062278:-|nuORF;;ENSG00000198000|ENST00000442668|NOL8;;nc|ENSG00000198000|Q76FK4-2|NOL8;;nc|ENSG00000198000|Q76FK4-4|NOL8;;ENST00000544867.5_1_9:95060120-95062368:-|nuORF 4.404009819030762 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13797 73.028 323.0 450690.0 25 0 113650.0 -1 0 50 1162.7987859000227 3485.374528300268 3 1163.461474597454 MULTI CID FTMS 0 0 0 13788 968882.375 0.0071219599799284 10 -1.03009033203125 9 4 {M(Oxidation (M))|F}G[WY]VM 6 -1 13.645 0.0 0.0 0.3915 0.0 0.0 1796.6115410949935 902.4113863580686 2699.022927453062 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G[WY]VM 0.3915 - 50 + 1 1.035 124897.7 1.0 8959 4836 13788 HBL1_DMSO_200M_050219_2,13797 HBL1_DMSO_200M_050219_2,13797, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13798 73.029 53.0 860220.0 25 0 93677.0 + 27599 PLDTPTPPEL 10 82 540.2849079987573 1078.5552630643144 2 540.2843505740166 MULTI CID FTMS 0 0 0 13788 811122.0 0.0269885076195963 9 -0.8933486938476562 10 Unmodified _PLDTPTPPEL_ REV__nc|ENSG00000259642|Q8NBB2|ST20-AS1 14.95716135407024 0.5965753712453801 4 EE{I|L}PP{I|L}[W{I|L}] 8 -1 31.235 0.0 0.0 2.896 0.0 0.0 83.03791243720859 0.0 83.03791243720859 0.0 -1.89771033162738 -1.89771033162738 0.0 0 0.0 0.0 0.0 0.0 EE{I|L}PP{I|L}[W{I|L}] 2.896 - 191 1 1.035 44365.1 1.0 8960 4836 13788 HBL1_DMSO_200M_050219_2,13798 HBL1_DMSO_200M_050219_2,13798,PLDTPTPPEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13799 73.03 55.0 1306900.0 25 0 151970.0 + 45620 YVLEGLKSV 9 96 504.2942765932495 0 504.2927734255791 PEAK CID FTMS 0 0 0 13788 796656.375 1.0 0 0.0 11 Unmodified _YVLEGLKSV_ ENSG00000107938|ENST00000356792|EDRF1;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;ENST00000525091.5_1_10:127408310-127436620:+|nuORF;nc|ENSG00000107938|Q3B7T1-3|EDRF1;nc|ENSG00000107938|Q3B7T1-5|EDRF1 34.40172386719151 0.0892392376003579 4 {I|L}E 2 7 21.964 0.0 0.0 2.1821 0.0 0.0 262.13403839621054 499.2896603876017 761.4236987838123 0.0 0.0 0.0 0.0 0 0.75 0.0 0.3494850021680094 0.0 + {I|L}E 2.1821 + + 125 + 1 1.035 59194.1 1.0 8961 4836 13788 HBL1_DMSO_200M_050219_2,13799 HBL1_DMSO_200M_050219_2,13799,YVLEGLKSV True True YVLEGLKSV 73.03029 504.292773425579 8041964.5 13788.0 ENSG00000107938|ENST00000356792|EDRF1;;nc|ENSG00000107938|Q3B7T1-3|EDRF1;;ENST00000525091.5_1_10:127408310-127436620:+|nuORF;;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;;nc|ENSG00000107938|Q3B7T1-5|EDRF1 5.361916224161784 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13800 73.036 317.0 373290.0 25 0 31584.0 + 40784 VLLGLSPLARE 11 148 584.3569326533695 1166.699312373539 2 584.3566161990166 MULTI CID FTMS 0 0 0 13788 696278.625 0.8437053196311327 -2 0.2018280029296875 12 Unmodified _VLLGLSPLARE_ REV__ENST00000605275.1_1_9:34646808-34647045:+|nuORF 4.897010918128616 0.8520435188433833 4 [{I|L}V]N 3 -1 20.546 0.0 0.0 1.7611 0.0 0.0 0.0 837.4813307663702 837.4813307663702 6.618318436887591 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]N 1.7611 - 278 1 1.035 92166.1 1.0 8962 4836 13788 HBL1_DMSO_200M_050219_2,13800 HBL1_DMSO_200M_050219_2,13800,VLLGLSPLARE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13801 73.039 120.0 675910.0 25 0 39534.0 + -1 VTFPSCTEAV 10 100 555.7604515932917 1109.5063502533833 2 555.7606078982353 MULTI CID FTMS 0 0 0 13788 575192.125 0.996903158185042 -3 0.3328399658203125 13 Carbamidomethyl (C) _VTFPSC(Carbamidomethyl (C))TEAV_ REV__ENSG00000115524|ENST00000335508|SF3B1 13.90604991867851 0.6142120002215601 4 VT 2 -1 35.133 0.0 0.0 3.1665 0.0 0.0 0.0 906.3697659626116 906.3697659626116 20.04432191740108 0.0 0.0 0.0 0 0.2302046884880938 1.0 0.4247425010840047 0.0 VT 3.1665 + + 51 + 1 1.035 66076.6 1.0 8963 4836 13788 HBL1_DMSO_200M_050219_2,13801 HBL1_DMSO_200M_050219_2,13801,VTFPSCTEAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13802 73.04 62.0 1178400.0 25 0 105700.0 + + 77 DGRPFPQVI 9 112 514.7804776093759 1027.5464022855515 2 514.7817870974541 MULTI CID FTMS 0 0 0 13788 667821.8125 0.511221746959816 -3 0.3328399658203125 14 Unmodified _AAGLGAWNGVL_ ENST00000566012.1_1_16:30077179-30079547:+|nuORF;nc|ENSG00000149925|P04075|ALDOA;ENSG00000149925|ENST00000642816|ALDOA;ENST00000564521.6_1_16:30075769-30079042:+|nuORF 24.020572477871973 0.5281922720044371 4 [{I|L}A]V{[C(Carbamidomethyl (C))E]|[WC]}PQV{I|L} 9 -1 + 49.319 0.0 0.0 4.7997 4.7997 70.611 0.0 0.0 0.0 5.440680443502757 14.09256854528806 5.440680443502757 1.9188552623891293 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [{I|L}A]V{[C(Carbamidomethyl (C))E]|[WC]}PQV{I|L};[{I|L}A]V{[CA]|SS}DPQV{I|L};{I|L}{I|L}G{[C(Carbamidomethyl (C))E]|[WC]}PQV{I|L};{I|L}{I|L}G{[CA]|SS}DPQV{I|L};{[VA]|[{I|L}G]}{I|L}{[C(Carbamidomethyl (C))E]|[WC]}PQV{I|L};[EP]EV[KS]QV{I|L};[{I|L}A]{[WS]|[C(Carbamidomethyl (C)){I|L}]}DPQV{I|L};[{I|L}A]V{[C(Carbamidomethyl (C))E]|[WC]}P[AG]V{I|L};{[VA]|[{I|L}G]}{I|L}{[CA]|SS}DPQV{I|L};[{I|L}A]V{[CA]|SS}DP[AG]V{I|L} 4.7997;4.613;4.2702;4.0835;4.0252;4.0252;3.9773;3.9036;3.8384;3.7211 -;-;-;-;-;-;-;-;-;- 965 1 1.035 63343.8 1.0 8964 4836 13788 HBL1_DMSO_200M_050219_2,13802 HBL1_DMSO_200M_050219_2,13802,AAGLGAWNGVL False False DGRPFPQVI 73.040107 514.781787097454 10936127.0 13788.0 ENST00000566012.1_1_16:30077179-30079547:+|nuORF;;nc|ENSG00000149925|P04075|ALDOA;;ENSG00000149925|ENST00000642816|ALDOA;;ENST00000564521.6_1_16:30075769-30079042:+|nuORF 3.765498638153076 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13803 73.044 179.0 813840.0 25 0 83090.0 14506 IGPAEAHSDSL 11 162 548.7657118282316 1095.516870723263 2 548.7650634646416 MULTI CID FTMS 0 0 0 13788 506173.28125 1.0 0 0.0 15 Unmodified _IGPAEAHSDSL_ ENSG00000136643|ENST00000366960|RPS6KC1;nc|ENSG00000136643|Q96S38-2|RPS6KC1 24.020572477871973 0.5281922720044371 4 [W{M(Oxidation (M))|F}]VRWCS{I|L} 8 9 + 30.331 0.0 0.0 2.7686 2.7686 63.094 0.0 0.0 0.0 0.3072623954359699 1.249387366082999 0.3072623954359699 1.249387366082999 0 0.3494850021680094 0.0 0.7864234895497298 0.0 [W{M(Oxidation (M))|F}]VRWCS{I|L};[W{M(Oxidation (M))|F}]VRWCTV;{[MS]|[{M(Oxidation (M))|F}A]}DVRWCS{I|L};[W{M(Oxidation (M))|F}]VW[VG]CS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}DVRWCTV;[W{M(Oxidation (M))|F}]VW[VG]CTV;{[MS]|[{M(Oxidation (M))|F}A]}DVW[VG]CS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}DVW[VG]CTV;[EP]A{M(Oxidation (M))|F}E{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RN];{[MS]|[{M(Oxidation (M))|F}A]}DVWK[DC]{I|L} 2.7686;2.6546;2.4914;2.4382;2.3773;2.3242;2.1659;2.0519;2.0191;1.9898 -;-;-;-;-;-;-;-;-;- 2922 + 1 1.035 118626.8 1.0 8965 4836 13788 HBL1_DMSO_200M_050219_2,13803 HBL1_DMSO_200M_050219_2,13803,IGPAEAHSDSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13804 73.045 82.0 977650.0 25 0 71274.0 + 23297 LSYSQAVTV 9 120 484.2583831501523 966.5022133671048 2 484.2589904665947 MULTI CID FTMS 0 0 0 13788 463170.84375 0.0013178322409299 54 -5.224372863769531 16 Unmodified _LSYSQAVTV_ REV__ENSG00000115145|ENST00000263904|STAM2 21.74664581756881 0.2544899275067181 4 P{I|L}ANT[KP]{I|L} 8 -1 22.85 0.0 0.0 2.3642 0.0 0.0 113.98330575167344 0.0 113.98330575167344 0.0 1.379138502733177 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}ANT[KP]{I|L} 2.3642 - 1013 + 1 1.035 67554.3 1.0 8966 4836 13788 HBL1_DMSO_200M_050219_2,13804 HBL1_DMSO_200M_050219_2,13804,LSYSQAVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13805 73.049 184.0 733490.0 25 0 121210.0 + 20193 LLAKEVQLV 9 152 506.8242922207765 1011.6340315083528 2 506.8239929080009 MULTI CID FTMS 0 0 0 13788 471386.5625 0.6110102282158769 -2 0.2018280029296875 17 Unmodified _LLAKEVQLV_ ENSG00000152223|ENST00000282041|EPG5;ENST00000585906.5_1_18:43437816-43497657:-|nuORF;ENST00000590884.5_1_18:43437816-43458370:-|nuORF;nc|ENSG00000152223|Q9HCE0-2|EPG5 32.30548876998284 0.1201446275138228 4 {I|L}{I|L}AQE{I|L}VKV 9 4 + 90.452 0.0 0.0 8.9412 8.9412 93.248 0.0 0.0 0.0 57.49257393756023 12.587418566968154 12.587418566968154 9.208187539523747 0 1.0941876774005248 2.0 0.3252574989159953 0.6237125054200234 {I|L}{I|L}AQE{I|L}VKV;{I|L}{I|L}A[AG]E{I|L}VKV;{I|L}{I|L}{[TV]|[{I|L}S]}[QT]KP{I|L};{I|L}VVNE{I|L}VKV;{I|L}VVGGE{I|L}VKV 8.9412;8.0309;3.8445;3.1924;2.2822 -;-;-;-;- 3753 + 1 1.035 107251.7 1.0 8967 4836 13788 HBL1_DMSO_200M_050219_2,13805 HBL1_DMSO_200M_050219_2,13805,LLAKEVQLV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13806 73.056 412.0 581950.0 25 0 41169.0 + 24803 MPIYPTYNEV 10 174 613.7915512600833 1225.5685495869666 2 613.7913085818291 MULTI CID FTMS 0 0 0 13788 439080.6875 0.5375979267715586 -3 0.3328399658203125 18 Unmodified _MPIYPTYNEV_ ENSG00000124201|ENST00000396105|ZNFX1;nc|ENSG00000124201|Q9P2E3-2|ZNFX1 71.92227651296345 0.0188747003512554 4 [{I|L}P]MYPTYNEV 10 2 + 77.322 0.0 0.0 6.3091 6.3091 78.82 0.0 0.0 0.0 19.20404215304604 14.146518864155126 14.146518864155126 3.0102999566398125 0 0.4163865622122673 1.5228787452803376 1.1549471895720984 0.3807196863200844 [{I|L}P]MYPTYNEV;[{I|L}P]YMPTYNEV;[{I|L}P]MYPTYGGEV;[{I|L}P]YMPTYGGEV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}YPTYNEV;[{I|L}P]Y[TP]MYNEV;{[VA]|[{I|L}G]}[NG]YPTYNEV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}YPTYGGEV;[YN]QVPTYNEV;[AG]{[NV]|[RG]}YPTYNEV 6.3091;6.0635;5.2507;5.0051;4.7422;4.6907;4.0592;3.9944;3.9732;3.9668 -;-;-;-;+;-;-;-;-;- + 3838 1 1.035 177813.1 1.0 8968 4836 13788 HBL1_DMSO_200M_050219_2,13806 HBL1_DMSO_200M_050219_2,13806,MPIYPTYNEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13807 73.066 536.0 319790.0 25 0 33145.0 + 2984 AVIGADSVTL 10 178 473.2667888004469 0 473.2667419314384 PEAK CID FTMS 0 0 0 13788 332141.5625 1.0 0 0.0 19 Unmodified _AVIGADSVTL_ ENSG00000108651|ENST00000261708|UTP6;ENST00000477860.1_1_17:30200326-30200766:-|nuORF 28.486842064014134 0.2299152863319618 4 {M(Oxidation (M))|F}TT 3 9 15.674 0.0 0.0 1.6595 0.0 0.0 211.1044800544768 381.22698226246 592.3314623169367 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}TT 1.6595 - 343 + 1 1.035 133195.2 1.0 8969 4836 13788 HBL1_DMSO_200M_050219_2,13807 HBL1_DMSO_200M_050219_2,13807,AVIGADSVTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13808 73.075 537.0 315720.0 25 0 73529.0 -1 0 88 915.4823839651428 2743.4253224956283 3 916.1508056521416 MULTI CID FTMS 0 0 0 13788 281403.53125 1.0 0 0.0 20 4 VSV{I|L}{M(Oxidation (M))|F} 5 -1 14.324 0.0 0.0 0.52211 0.0 0.0 1845.879803552072 349.18732629947505 2195.067129851547 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 VSV{I|L}{M(Oxidation (M))|F} 0.52211 - 237 + 1 1.035 123680.5 1.0 8970 4836 13788 HBL1_DMSO_200M_050219_2,13808 HBL1_DMSO_200M_050219_2,13808, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13810 73.079 0.32 132300000.0 25 0 16728000.0 + 18371 KVPEWVDTV 9 65 536.7876595663572 1071.5607661995143 2 536.7883788943291 MULTI CID FTMS 0 0 0 13809 170627584.0 1.0 0 0.0 1 Unmodified _KVPEWVDTV_ ENSG00000105372|ENST00000598742|RPS19 28.49450938151212 0.1686335738423394 4 [WE]PVKVDTV 9 4 + 60.851 0.0 0.0 5.6788 5.6788 73.977 0.0 0.0 0.0 1.7609125905568137 16.478174818886373 1.7609125905568137 1.7609125905568137 0 0.9247425010840048 0.0 0.0 0.0 [WE]PVKVDTV;[EP]WVKVDTV;[WE]PVDTVKV;[EP]WVDTVKV;{[MG]|[TS]}[HS]VKVDTV;{[QV]|[N{I|L}]|[RA]|[KV]}[EP]WVDTV;[WE]PV[WR]TV;[EP]WV[WR]TV;{[MG]|[TS]}[HS]VDTVKV;{[ES]|[DT]|[{I|L}C]}VS[HS]TVKV 5.6788;5.5144;4.9312;4.7669;4.3742;4.1199;3.8862;3.7219;3.6266;3.5553 -;-;-;-;-;+;-;-;-;- + 256 1 1.029 43132.3 1.0 8971 4837 13809 HBL1_DMSO_200M_050219_2,13810 HBL1_DMSO_200M_050219_2,13810,KVPEWVDTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13811 73.09 600.0 441350.0 25 0 32635.0 + 39510 VATALPLQV 9 188 456.2817628687197 0 456.2817260622978 PEAK CID FTMS 0 0 0 13809 182275.125 0.7084084213195713 1 -0.1357879638671875 2 Unmodified _VATALPLQV_ ENSG00000068024|ENST00000543185|HDAC4;ENST00000463007.5_1_2:240011659-240219867:-|nuORF;ENST00000493582.5_1_2:240016681-240274403:-|nuORF;ENST00000496347.1_1_2:240108838-240158334:-|nuORF;ENST00000535493.5_1_2:240016681-240219867:-|nuORF;nc|ENSG00000068024|P56524|HDAC4 48.345845343767074 0.036192834052621 4 P{I|L}PN 4 7 24.624 0.0 0.0 2.7043 0.0 0.0 358.213109622402 128.07221399478752 486.28532361718953 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 1.0189301784845295 P{I|L}PN 2.7043 - 281 + 1 1.029 201718.1 1.0 8972 4837 13809 HBL1_DMSO_200M_050219_2,13811 HBL1_DMSO_200M_050219_2,13811,VATALPLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13812 73.091 23.0 2887300.0 25 0 322730.0 + 42799 VVITEKGISDL 11 96 587.3404068052944 1172.666260677389 2 587.3400146365166 MULTI CID FTMS 0 0 0 13809 2369722.25 0.3336550713102347 -2 0.1640396118164062 3 Unmodified _VVITEKGISDL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 55.23464941255904 0.0886405999673349 4 VV{I|L}T[MT]G{I|L}TGD 11 5 79.796 0.0 0.0 6.8046 0.0 0.0 0.0 82.06701074771718 82.06701074771718 52.04362106154839 0.0 0.0 0.0 0 0.75 2.0 1.416386562212267 0.0 VV{I|L}T[MT]G{I|L}TGD 6.8046 - 1116 + 1 1.029 56696.0 1.0 8973 4837 13809 HBL1_DMSO_200M_050219_2,13812 HBL1_DMSO_200M_050219_2,13812,VVITEKGISDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13813 73.092 35.0 1381600.0 25 0 146540.0 + 3957 DALMKSLQV 9 89 502.7760777024605 1003.5376024717208 2 502.7758361697197 MULTI CID FTMS 0 0 0 13809 1198262.125 0.6249132653154352 -1 0.0665283203125 4 Unmodified _DALMKSLQV_ ENSG00000132463|ENST00000254799|GRSF1;ENST00000505068.5_1_4:71691792-71705589:-|nuORF;nc|ENSG00000132463|Q12849-5|GRSF1 47.74868867922204 0.0453060283459952 4 {[DA]|[EG]}{I|L}M 4 5 48.5 0.0 0.0 4.8329 0.0 0.0 0.0 570.3263033502561 570.3263033502561 27.073259432077563 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.0 0.0 + {[DA]|[EG]}{I|L}M 4.8329 + + 187 + 1 1.029 42507.7 1.0 8974 4837 13809 HBL1_DMSO_200M_050219_2,13813 HBL1_DMSO_200M_050219_2,13813,DALMKSLQV True True DALMKSLQV 73.092235 502.77583616972 14505443.0 13809.0 ENSG00000132463|ENST00000254799|GRSF1;;nc|ENSG00000132463|Q12849-5|GRSF1;;ENST00000505068.5_1_4:71691792-71705589:-|nuORF 5.678510745366414 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13814 73.094 51.0 1202400.0 25 0 98739.0 + -1 GILPMSCDMV 10 104 549.2356207231173 1096.4566885130346 2 549.2355224490166 MULTI CID FTMS 0 0 0 13809 920456.4375 0.4909419457675488 -2 0.1640396118164062 5 2 Oxidation (M) _GILPM(Oxidation (M))SCDM(Oxidation (M))V_ REV__ENSG00000157152|ENST00000621198|SYN2;REV__nc|ENSG00000157152|Q92777-2|SYN2 15.847184025352805 0.5816416552707754 4 {[VA]|[{I|L}G]}T[HD]E{M(Oxidation (M))|F}E 8 -1 37.443 0.0 0.0 3.415 0.0 0.0 0.0 165.0673769586547 165.0673769586547 23.46405978141579 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[VA]|[{I|L}G]}T[HD]E{M(Oxidation (M))|F}E 3.415 - 226 + 1 1.029 54784.4 1.0 8975 4837 13809 HBL1_DMSO_200M_050219_2,13814 HBL1_DMSO_200M_050219_2,13814,GILPMSCDMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13815 73.096 141.0 932570.0 25 0 79457.0 + 32583 SAVELPKI 8 120 428.7608690880684 855.5071852429369 2 428.7610351443291 MULTI CID FTMS 0 0 0 13809 699138.0625 0.5649956052789988 -4 0.3993682861328125 6 Unmodified _SAVELPKI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-4|BRCC3;nc|ENSG00000185515|P46736|BRCC3 36.12702656103203 0.299085846329477 4 {[SA]|[TG]}VE{I|L}PK{I|L} 8 0 + 67.509 0.0 0.0 7.8911 7.8911 90.251 0.0 0.0 0.0 52.35850608362215 2.539237471316298 2.539237471316298 8.750612633917008 0 0.9896518287104438 2.0 0.4247425010840047 0.0 + + {[SA]|[TG]}VE{I|L}PK{I|L};{[SA]|[TG]}VE{I|L}{I|L}[KP];[KP]{I|L}{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]K{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7.8911;6.8682;0.67282;0.13569 +;-;-;- + 143 + 1 1.029 105316.7 1.0 8976 4837 13809 HBL1_DMSO_200M_050219_2,13815 HBL1_DMSO_200M_050219_2,13815,SAVELPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13816 73.099 145.0 642830.0 25 0 48587.0 + -1 HMLVRKMI 8 143 522.295914562917 1042.577276192634 2 522.2966186404228 MULTI CID FTMS 0 0 0 13809 341026.65625 0.5670796206517248 -2 0.1640396118164062 7 Oxidation (M) _HM(Oxidation (M))LVRKMI_ REV__ENST00000356321.4_1_15:35274023-35274074:-|nuORF 8.593279151180031 0.7721714526254883 4 VVQ{[{M(Oxidation (M))|F}H]|[RQ]}{[MG]|[TS]}{I|L}{I|L} 9 -1 VVQ{[{M(Oxidation (M))|F}H]|[RQ]}{[MG]|[TS]}{I|L} + + 11.99 -7.4599 -0.81844 1.15 1.15 44.255 0.0 0.0 0.0 0.0 -4.463950151760656 -4.463950151760656 0.0 0 0.0 0.0 0.0 0.0 VVQ{[{M(Oxidation (M))|F}H]|[RQ]}{[MG]|[TS]}{I|L}{I|L} 1.15 - 145 + 1 1.029 76088.8 1.0 8977 4837 13809 HBL1_DMSO_200M_050219_2,13816 HBL1_DMSO_200M_050219_2,13816,HMLVRKMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13817 73.108 482.0 350810.0 25 0 22571.0 + 14462 IFYDRAEYL 9 155 595.2982587624228 1188.5819645916456 2 595.2989990115166 MULTI CID FTMS 0 0 0 13809 286856.59375 1.0 0 0.0 8 Unmodified _IFYDRAEYL_ ENSG00000155363|ENST00000369645|MOV10;ENST00000468624.5_1_1:113217534-113241292:+|nuORF;ENST00000496577.5_1_1:113231344-113241292:+|nuORF;nc|ENSG00000155363|Q9HCE1-2|MOV10 37.07464296494664 0.0915153923251136 4 {I|L}{M(Oxidation (M))|F}YDK 5 5 52.193 0.0 0.0 4.3912 0.0 0.0 0.0 519.2083834283811 519.2083834283811 18.169701614780983 0.0 0.0 0.0 0 0.3807196863200844 0.958607314841775 0.6861818737241735 0.0 {I|L}{M(Oxidation (M))|F}YDK 4.3912 - 1115 + 1 1.029 126579.8 1.0 8978 4837 13809 HBL1_DMSO_200M_050219_2,13817 HBL1_DMSO_200M_050219_2,13817,IFYDRAEYL True True IFYDRAEYL 73.107858 595.298999011517 2505524.0 13809.0 ENST00000468624.5_1_1:113217534-113241292:+|nuORF;;nc|ENSG00000155363|Q9HCE1-2|MOV10;;ENSG00000155363|ENST00000369645|MOV10;;ENST00000496577.5_1_1:113231344-113241292:+|nuORF 5.482714017232259 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13818 73.119 627.0 346900.0 25 0 88637.0 + -1 HYYSITINY 9 100 1173.168794374273 0 1173.170092761517 PEAK CID FTMS 0 0 0 13809 302543.96875 0.9904659004425654 2 -0.1696853637695312 9 ENST00000477232.5_1_2:162241962-162267908:+|nuORF;ENSG00000115233|ENST00000409682|PSMD14 4 YN{I|L}T{I|L}SY 7 -1 34.878 0.0 0.0 1.4878 0.0 0.0 1189.7954434166656 297.09971033267817 1486.8951537493438 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6382104921644451 0.25 YN{I|L}T{I|L}SY 1.4878 - 652 + 1 1.029 146999.3 1.0 8979 4837 13809 HBL1_DMSO_200M_050219_2,13818 HBL1_DMSO_200M_050219_2,13818, False False HYYSITINY 73.118842 1173.17009276152 15296095.375 13809.0 ENST00000477232.5_1_2:162241962-162267908:+|nuORF;;ENSG00000115233|ENST00000409682|PSMD14 5.802415529886882 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13819 73.13 620.0 382620.0 25 0 23985.0 + 36082 SVQIVHRT 8 198 470.2735950578147 938.5326371824294 2 470.7770873904228 MULTI CID FTMS 0 0 0 13809 237880.96875 0.7929766243398755 5 -0.4957733154296875 10 Unmodified _SVQIVHRT_ REV__ENSG00000115705|ENST00000329066|TPO;REV__nc|ENSG00000115705|P07202-2|TPO;REV__nc|ENSG00000115705|P07202-3|TPO;REV__nc|ENSG00000115705|P07202-4|TPO;REV__nc|ENSG00000115705|P07202-5|TPO;REV__nc|ENSG00000115705|P07202-6|TPO;REV__nc|ENSG00000115705|P07202-7|TPO;REV__nc|ENSG00000115705|P07202-8|TPO 26.88365393820708 0.4786498634179528 4 [VS]GA{I|L}QV 7 -1 28.656 0.0 0.0 3.0532 0.0 0.0 0.0 281.1408786813792 281.1408786813792 -0.5732239689283745 0.0 -0.5732239689283745 0.0 0 0.0 1.2218487496163564 1.0273947452997714 0.0 [VS]GA{I|L}QV 3.0532 - 2515 1 1.029 180470.3 1.0 8980 4837 13809 HBL1_DMSO_200M_050219_2,13819 HBL1_DMSO_200M_050219_2,13819,SVQIVHRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13820 73.142 686.0 388800.0 25 0 44924.0 27427 PIPYYDKNS 9 256 366.18029356399006 1095.5190512921702 3 366.1791869997978 MULTI CID FTMS 0 0 0 13809 226715.015625 0.7508186438325727 -2 0.1640396118164062 11 Unmodified _PIPYYDKNS_ ENSG00000105383|ENST00000262262|CD33;ENST00000601785.5_1_19:51728415-51738809:+|nuORF;nc|ENSG00000105383|P20138-2|CD33 13.042465956692816 0.4836390050082244 4 NEVDTV 6 8 19.466 0.0 0.0 1.7769 0.0 0.0 420.2047291486344 0.0 420.2047291486344 0.0 5.591091448604024 0.0 0.0 0 0.2326446478103828 0.0 0.0 0.0 NEVDTV 1.7769 - 1453 1 1.029 217407.9 1.0 8981 4837 13809 HBL1_DMSO_200M_050219_2,13820 HBL1_DMSO_200M_050219_2,13820,PIPYYDKNS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13821 73.153 684.0 386590.0 25 0 67355.0 + 10820 FYYDGKVMKL 10 140 421.8866119581314 0 421.8867980837822 PEAK CID FTMS 0 0 0 13809 214956.9375 0.641089048238474 -1 0.0665283203125 12 Unmodified _FYYDGKVMKL_ ENSG00000198900|ENST00000361337|TOP1 44.391923383255 0.0798298465269738 4 {I|L}KMDVG 6 8 18.827 0.0 0.0 2.2367 0.0 0.0 70.32515155122537 125.07250391177968 195.3976554630051 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5629529932484498 0.0 {I|L}KMDVG 2.2367 - 292 + 1 1.029 213581.5 1.0 8982 4837 13809 HBL1_DMSO_200M_050219_2,13821 HBL1_DMSO_200M_050219_2,13821,FYYDGKVMKL True True FYYDGKVMKL 73.153448 421.886798083782 3166011.25 13809.0 ENSG00000198900|ENST00000361337|TOP1 5.70009183883667 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13822 73.164 542.0 145820.0 25 0 16911.0 + -1 CQFMSYYEWSL 11 97 765.3081589233336 1528.6017649134672 2 765.8096191287041 MULTI CID FTMS 0 0 0 13809 202908.375 0.3525330534960727 -2 0.1640396118164062 13 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))QFM(Oxidation (M))SYYEWSL_ REV__ENSG00000064313|ENST00000378164|TAF2 3.2813086475875832 0.8596665074481906 4 {[VA]|[{I|L}G]}VE 4 -1 33.188 0.0 0.0 2.1711 0.0 0.0 0.0 1127.3613947153028 1127.3613947153028 7.178701327377482 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}VE 2.1711 - 141 1 1.029 60895.7 1.0 8983 4837 13809 HBL1_DMSO_200M_050219_2,13822 HBL1_DMSO_200M_050219_2,13822,CQFMSYYEWSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13823 73.173 501.0 391290.0 25 0 28567.0 + 10180 FQDDRYLYM 9 154 625.7789340364635 1249.543315139727 2 625.7782470583916 MULTI CID FTMS 0 0 0 13809 197005.140625 0.4404334229663688 -2 0.1640396118164062 14 Unmodified _FQDDRYLYM_ ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2;ENST00000582445.1_1_18:18625251-18629157:-|nuORF 51.41523569358685 0.0372669606867193 4 [DP]E{I|L}AHQ{M(Oxidation (M))|F}YM 10 8 + 56.526 0.0 0.0 4.5237 4.5237 70.425 0.0 0.0 0.0 3.0968612854826034 16.532125137753432 3.0968612854826034 2.430380486862944 0 0.7742275032520141 0.6575773191777937 0.5387254899964358 0.4247425010840047 [DP]E{I|L}AHQ{M(Oxidation (M))|F}YM;[DP]EA{I|L}HQ{M(Oxidation (M))|F}YM;[YV]{M(Oxidation (M))|F}[HD]Y{I|L}YM;[{M(Oxidation (M))|F}V]Y[HD]Y{I|L}YM;[DP]E{I|L}AHQY{M(Oxidation (M))|F}M;[DP]EA{I|L}HQY{M(Oxidation (M))|F}M;{[QN]|[E{I|L}]|[KN]}DPAHQ{M(Oxidation (M))|F}YM;[DP]E{I|L}AH[AG]{M(Oxidation (M))|F}YM;[EP]D{I|L}AHQ{M(Oxidation (M))|F}YM;[YV]{M(Oxidation (M))|F}[QP][CS]{I|L}YM 4.5237;4.3292;4.2759;4.0983;4.0838;3.8893;3.6445;3.4504;3.3865;3.298 -;-;-;-;-;-;-;-;-;- 3496 1 1.029 148000.2 1.0 8984 4837 13809 HBL1_DMSO_200M_050219_2,13823 HBL1_DMSO_200M_050219_2,13823,FQDDRYLYM True True FQDDRYLYM 73.173302 625.778247058392 3909072.75 13809.0 ENSG00000134318|ENST00000315872|ROCK2;;ENST00000582445.1_1_18:18625251-18629157:-|nuORF;;ENSG00000067900|ENST00000399799|ROCK1 6.886302789052327 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13824 73.177 174.0 589090.0 25 0 53326.0 15486 IPSRLLAI 8 100 441.792077728136 881.5696025230719 2 441.7920715212822 MULTI CID FTMS 0 0 0 13809 178657.796875 0.7752687346739295 1 -0.1357879638671875 15 Unmodified _IPSRLLAI_ ENSG00000184349|ENST00000333274|EFNA5;ENST00000510359.1_1_5:106716958-106724204:-|nuORF 24.020572477871973 0.5389365498350341 4 {I|L}P{I|L}A[R{I|L}]S{I|L} 8 4 + 46.689 0.0 0.0 5.2962 5.2962 81.273 0.0 0.0 0.0 9.073684735465008 0.2872415126189409 0.2872415126189409 8.65301426102544 0 0.3494850021680094 2.0 0.0 0.0 {I|L}P{I|L}A[R{I|L}]S{I|L};{I|L}P{I|L}A[R{I|L}]TV;{I|L}A{I|L}R{I|L}PS{I|L};VVVR{I|L}PS{I|L};{I|L}A{I|L}R{I|L}PTV;{I|L}A{I|L}[VG]{I|L}PS{I|L};VVVR{I|L}PTV;VVV[VG]{I|L}PS{I|L};{I|L}A{I|L}P[R{I|L}]S{I|L};VVVP[R{I|L}]S{I|L} 5.2962;4.3146;2.8137;2.5426;1.8322;1.7631;1.561;1.4919;1.3488;1.0777 -;-;-;-;-;-;-;-;-;- 443 + 1 1.029 83406.8 1.0 8985 4837 13809 HBL1_DMSO_200M_050219_2,13824 HBL1_DMSO_200M_050219_2,13824,IPSRLLAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13825 73.188 666.0 376580.0 25 0 28690.0 + 21328 LPFDARLL 8 212 472.7831681990861 0 472.7825195193291 PEAK CID FTMS 0 0 0 13809 148346.296875 0.6180937960437468 -2 0.1640396118164062 16 Unmodified _LPFDARLL_ REV__ENSG00000127578|ENST00000319070|WFIKKN1 43.85829265575387 0.1228905615125388 4 P{M(Oxidation (M))|F}TT{I|L}W 6 -1 40.372 0.0 0.0 4.2787 0.0 0.0 113.0860742446368 82.06697260074452 195.1530468453813 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 1.0941876774005248 0.0 P{M(Oxidation (M))|F}TT{I|L}W 4.2787 - 377 + 1 1.029 191023.3 1.0 8986 4837 13809 HBL1_DMSO_200M_050219_2,13825 HBL1_DMSO_200M_050219_2,13825,LPFDARLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13826 73.2 613.0 79442.0 25 0 5046.6 -1 0 95 963.7848839524823 2888.332822457647 3 964.7786743044852 MULTI CID FTMS 0 0 0 -1 0 17 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WK]{I|L}TGV 8 -1 24.486 0.0 0.0 0.84777 0.0 0.0 0.0 1939.821322784072 1939.821322784072 11.506500276696546 0.0 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.4247425010840047 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WK]{I|L}TGV 0.84777 - 995 1 1.029 40936.6 1.0 8987 4837 13809 HBL1_DMSO_200M_050219_2,13826 HBL1_DMSO_200M_050219_2,13826, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13827 73.211 620.0 131140.0 25 0 5610.8 -1 0 118 657.0217773318291 0 657.0217773318291 PEAK CID FTMS 0 0 0 -1 0 18 4 C(Carbamidomethyl (C))VKVTDVW 8 -1 31.372 0.0 0.0 2.3911 0.0 0.0 98.47596654063872 223.07268701724848 321.5486535578872 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 C(Carbamidomethyl (C))VKVTDVW 2.3911 - 285 + 1 1.029 71819.9 1.0 8988 4837 13809 HBL1_DMSO_200M_050219_2,13827 HBL1_DMSO_200M_050219_2,13827, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13829 73.215 3.1 19666000.0 25 0 2513200.0 + 22077 LPPPTLRI 8 58 453.7924634572879 0 453.7923461794853 PEAK CID FTMS 0 0 0 13828 20892536.0 0.6441730290944637 4 -0.3599853515625 1 Unmodified _LPPPTLRI_ ENSG00000221821|ENST00000408925|C6orf226 13.90604991867851 0.4976509803484061 4 PPP 3 5 20.445 0.0 0.0 2.2577 0.0 0.0 113.08372261439315 498.3075655572876 611.3912881716807 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + PPP 2.2577 + + 15 + 1 1.029 52133.5 1.0 8989 4838 13828 HBL1_DMSO_200M_050219_2,13829 HBL1_DMSO_200M_050219_2,13829,LPPPTLRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13830 73.216 9.4 5709800.0 25 0 518620.0 + 41567 VPPEILNNV 9 78 497.7825498997915 993.550546866383 2 497.7822753787041 MULTI CID FTMS 0 0 0 13828 6484412.5 0.7595327062628531 3 -0.28533935546875 2 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 32.30548876998284 0.1201446275138228 4 [VP][EP]{I|L}{I|L}NNV 9 0 + 45.564 0.0 0.0 4.5859 4.5859 71.808 0.0 0.0 0.0 4.259687322722812 9.335295873671754 4.259687322722812 3.0102999566398125 0 0.5440228147639203 2.0 0.0 0.0 + + [VP][EP]{I|L}{I|L}NNV;[VP][EP]{I|L}QVNV;[EP]{I|L}PV{I|L}NNV;[EP]{I|L}P{I|L}VNNV;[EP]{I|L}PVQVNV;[EP]P{I|L}V{I|L}NNV;[VP][EP]{I|L}{I|L}GGNV;[EP]P{I|L}VQVNV;[EP]{I|L}P{I|L}NVNV;[EP]PV{I|L}{I|L}NNV 4.5859;4.2829;4.1572;3.8542;3.8542;3.8542;3.6591;3.5512;3.5512;3.5512 +;-;-;-;-;-;-;-;-;- + 393 1 1.029 47591.4 1.0 8990 4838 13828 HBL1_DMSO_200M_050219_2,13830 HBL1_DMSO_200M_050219_2,13830,VPPEILNNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13831 73.218 10.0 5721600.0 25 0 1381300.0 + -1 VDLIALTL 8 62 450.27503394605856 898.5355149589171 2 450.2749511599541 MULTI CID FTMS 0 0 0 13828 6641225.5 0.974044380654355 -1 0.1357879638671875 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VDLIALTL_ REV__ENST00000509232.5_1_4:164057286-164087879:-|nuORF 0.7936320650641473 0.8195151834710337 4 V 1 -1 9.2694 0.0 0.0 1.0316 0.0 0.0 781.4560452096969 0.0 781.4560452096969 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0316 + + 4 + 1 1.029 50989.1 1.0 8991 4838 13828 HBL1_DMSO_200M_050219_2,13831 HBL1_DMSO_200M_050219_2,13831,VDLIALTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13832 73.219 10.0 4056900.0 25 0 152690.0 -1 LLMLDDQRLLL 11 80 679.8873001661174 1357.7600473990346 2 679.8878661990166 MULTI CID FTMS 0 0 0 13828 5586217.0 1.0 0 0.0 4 Oxidation (M) _LLM(Oxidation (M))LDDQRLLL_ ENSG00000177628|ENST00000368373|GBA1;ENST00000459805.5_1_1:155184905-155186549:-|nuORF;ENST00000473223.5_1_1:155184463-155187072:-|nuORF;ENST00000486197.5_1_1:155184905-155187358:-|nuORF;ENST00000566701.5_1_1:155184905-155187601:-|nuORF;nc|ENSG00000177628|P04062-2|GBA1;nc|ENSG00000177628|P04062-3|GBA1;nc|ENSG00000177628|P04062-4|GBA1;nc|ENSG00000177628|P04062-5|GBA1 16.149105407346934 0.6992268271266642 4 VPYE{I|L}Q 6 -1 81.86 0.0 0.0 6.029 0.0 0.0 0.0 625.3682345025999 625.3682345025999 26.7223489826171 0.0 0.0 0.0 0 2.1989700043360187 1.5228787452803376 0.0 0.3494850021680094 VPYE{I|L}Q 6.029 - 1231 + 1 1.029 34501.0 1.0 8992 4838 13828 HBL1_DMSO_200M_050219_2,13832 HBL1_DMSO_200M_050219_2,13832,LLMLDDQRLLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13833 73.22 21.0 2095900.0 25 0 451040.0 + 31738 RRSTKGLV 8 59 458.7880193260251 915.5614857188502 2 458.7878600955009 MULTI CID FTMS 0 0 0 13828 3592113.0 0.9926277189064554 -1 0.1357879638671875 5 Unmodified _RRSTKGLV_ REV__ENSG00000114993|ENST00000272430|RTKN;REV__ENST00000464094.2_1_2:74659592-74666815:-|nuORF;REV__ENST00000472518.1_1_2:74659592-74668973:-|nuORF;REV__nc|ENSG00000114993|Q9BST9-2|RTKN;REV__nc|ENSG00000114993|Q9BST9-3|RTKN 0.0 0.8243325171867699 4 {I|L} 1 -1 10.837 0.0 0.0 1.1837 0.0 0.0 784.4663146756847 0.0 784.4663146756847 0.0 9.243661623346757 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1837 + + 4 + 1 1.029 39909.3 1.0 8993 4838 13828 HBL1_DMSO_200M_050219_2,13833 HBL1_DMSO_200M_050219_2,13833,RRSTKGLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13834 73.221 14.0 4106100.0 25 0 546440.0 + 30284 QYPGRSLVF 9 81 533.7893368320152 1065.5641207308304 2 533.7890502810478 MULTI CID FTMS 0 0 0 13828 3509761.0 0.944651368283418 -1 0.1357879638671875 6 Unmodified _QYPGRSLVF_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 21.53697664764585 0.2571576504437394 4 QYP 3 6 44.57 0.0 0.0 4.1827 0.0 0.0 0.0 674.3662813775999 674.3662813775999 23.271351114183275 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 + QYP 4.1827 + + 40 + 1 1.029 50942.2 1.0 8994 4838 13828 HBL1_DMSO_200M_050219_2,13834 HBL1_DMSO_200M_050219_2,13834,QYPGRSLVF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13835 73.222 23.0 2077500.0 25 0 242600.0 + 11725 KLLDEAIQAV 10 80 550.3223278189857 1098.6301027047714 2 550.3218261599541 MULTI CID FTMS 0 0 0 13828 2830387.25 0.8811263269663026 -1 0.1357879638671875 7 Unmodified _GLIDLALSQAV_ ENST00000563984.1_1_16:46717374-46723045:-|nuORF;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENSG00000069329|ENST00000299138|VPS35;ENST00000569950.1_1_16:46715399-46723351:-|nuORF 21.53697664764585 0.586507868110548 4 {[VA]|[{I|L}G]}EE{I|L}K{I|L}QAV 10 4 + 73.581 0.0 0.0 6.6976 6.6976 85.883 0.0 0.0 0.0 16.242661796148568 50.905338034998735 16.242661796148568 7.403626894942434 0 0.9247425010840048 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}EE{I|L}K{I|L}QAV;{[VA]|[{I|L}G]}AG{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}QAV;{[VA]|[{I|L}G]}Q{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}QAV;{[VA]|[{I|L}G]}EE{I|L}K{I|L}[AG]AV;{[VA]|[{I|L}G]}A{[WN]|[YH]}K{I|L}QAV;{[VA]|[{I|L}G]}AA[QT]K{I|L}QAV;{[VA]|[{I|L}G]}{I|L}T[DV]A{I|L}QAV;{[VA]|[{I|L}G]}AG{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}[AG]AV;{[VA]|[{I|L}G]}Q{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}[AG]AV;{[VA]|[{I|L}G]}{I|L}EEK{I|L}QAV 6.6976;6.0237;5.9731;5.8634;5.4251;5.3154;5.2688;5.1928;5.139;5.1046 -;-;-;-;-;-;-;-;-;- 569 1 1.029 46021.6 1.0 8995 4838 13828 HBL1_DMSO_200M_050219_2,13835 HBL1_DMSO_200M_050219_2,13835,GLIDLALSQAV False False KLLDEAIQAV 73.222251 550.321826159954 31048892.0 13828.0 ENST00000563984.1_1_16:46717374-46723045:-|nuORF;;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35;;ENST00000569950.1_1_16:46715399-46723351:-|nuORF 5.46431835492452 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13836 73.223 22.0 2026600.0 25 0 446260.0 + -1 VRKVQFPIM 9 66 567.3299654973393 1132.6453780614786 2 567.3302490115166 MULTI CID FTMS 0 0 0 13828 2524838.75 0.6669702125287723 1 -0.0338973999023437 8 Oxidation (M) _VRKVQFPIM(Oxidation (M))_ REV__ENST00000509330.5_1_6:64394512-64394560:+|nuORF 0.6014990680409731 0.8936861360942873 4 V 1 -1 9.3971 0.0 0.0 0.82966 0.0 0.0 1015.5656641716332 0.0 1015.5656641716332 0.0 9.397130343970748 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.82966 + + 1 + 1 1.029 42236.2 1.0 8996 4838 13828 HBL1_DMSO_200M_050219_2,13836 HBL1_DMSO_200M_050219_2,13836,VRKVQFPIM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13837 73.226 105.0 1125900.0 25 0 190110.0 21163 LPAVRKHL 8 103 467.3014506022957 932.5883482713916 2 467.3013793826103 MULTI CID FTMS 0 0 0 13828 2263356.0 0.8973416124492413 -1 0.1357879638671875 9 Unmodified _LPAVRKHL_ ENST00000427163.1_1_13:90823951-90824050:+|nuORF 11.114462752807354 0.7467182956244686 4 {I|L} 1 7 12.474 0.0 0.0 1.3376 0.0 0.0 801.493207745804 0.0 801.493207745804 0.0 2.2083186039940017 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3376 + + 76 + 1 1.029 95207.5 1.0 8997 4838 13828 HBL1_DMSO_200M_050219_2,13837 HBL1_DMSO_200M_050219_2,13837,LPAVRKHL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13838 73.227 15.0 2663300.0 25 0 265280.0 + 44055 YIPTELDQV 9 75 539.2767777714703 1076.5390026097405 2 539.2756225466728 MULTI CID FTMS 0 0 0 13828 1686349.5 0.163919685502734 -3 0.2998275756835937 10 Unmodified _YIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 16.942295170755138 0.3780752226737986 4 [TP]E{I|L}DQG 7 3 38.263 0.0 0.0 3.5542 0.0 0.0 0.0 333.187781256478 333.187781256478 5.436468077982283 0.0 0.0 0.0 0 0.0 0.958607314841775 0.7742275032520141 0.0 [TP]E{I|L}DQG 3.5542 - 208 1 1.029 37683.7 1.0 8998 4838 13828 HBL1_DMSO_200M_050219_2,13838 HBL1_DMSO_200M_050219_2,13838,YIPTELDQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13839 73.228 50.0 1601100.0 25 0 142170.0 + 2276 AQGGVLPNI 9 110 434.7482694486962 867.4819859641924 2 434.7479736208916 MULTI CID FTMS 0 0 0 13828 1341139.875 0.2433981728529361 4 -0.3599853515625 11 Unmodified _AQGGVLPNI_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000454426.1_1_6:25882256-25882391:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 54.773552608820026 0.0299037012502309 4 {[QV]|[N{I|L}]|[RA]|[KV]}GQ{I|L}PN{I|L} 8 3 {[QV]|[N{I|L}]|[RA]|[KV]}GQ + + 29.954 6.3653 1.5442 3.4529 3.4529 47.059 0.0 0.0 0.0 0.0 18.35979084976365 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.6109243748081782 {[QV]|[N{I|L}]|[RA]|[KV]}GQ{I|L}PN{I|L} 3.4529 - 329 + 1 1.029 68478.8 1.0 8999 4838 13828 HBL1_DMSO_200M_050219_2,13839 HBL1_DMSO_200M_050219_2,13839,AQGGVLPNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13840 73.23 60.0 456070.0 25 0 42338.0 -1 LIHTLIHIC 9 68 560.3218664409794 1118.6291799487587 2 560.3222534060478 MULTI CID FTMS 0 0 0 13828 983128.625 0.6937609378307812 3 -0.28533935546875 12 Carbamidomethyl (C) _LIHTLIHIC(Carbamidomethyl (C))_ ENST00000315872.10_1_2:11323403-11323562:-|nuORF 2.302733041254933 0.8342969208511092 4 {I|L} 1 -1 10.379 0.0 0.0 0.9278 0.0 0.0 987.5340546819604 0.0 987.5340546819604 0.0 6.399203482970215 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.9278 + + 18 + 1 1.029 29566.7 1.0 9000 4838 13828 HBL1_DMSO_200M_050219_2,13840 HBL1_DMSO_200M_050219_2,13840,LIHTLIHIC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13841 73.231 48.0 1528600.0 25 0 119130.0 + 21577 LPKLRDLV 8 91 477.3109315032138 952.6073100732276 2 477.3110534548759 MULTI CID FTMS 0 0 0 13828 945264.75 0.2652006859619775 2 -0.2138671875 13 Unmodified _LPKLRDLV_ REV__ENSG00000198920|ENST00000361413|KIAA0753;REV__ENST00000575027.1_1_17:6493863-6510239:-|nuORF;REV__nc|ENSG00000198920|Q2KHM9-2|KIAA0753 25.399314129420983 0.5099049743284904 4 {I|L}P{I|L}KY{I|L}PG 8 -1 49.73 0.0 0.0 5.2204 0.0 0.0 0.0 68.05140863590077 68.05140863590077 19.76403468139864 0.0 0.0 0.0 0 0.6989700043360187 1.6989700043360187 0.0 0.0 {I|L}P{I|L}KY{I|L}PG 5.2204 - 267 + 1 1.029 62067.3 1.0 9001 4838 13828 HBL1_DMSO_200M_050219_2,13841 HBL1_DMSO_200M_050219_2,13841,LPKLRDLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13842 73.233 66.0 939630.0 25 0 125360.0 + 13542 HPFEAQTLI 9 88 528.2801175504819 1054.5456821677635 2 528.2797729372978 MULTI CID FTMS 0 0 0 13828 884239.1875 0.1566431433353218 3 -0.28533935546875 14 Unmodified _HPFEAQTLI_ ENSG00000136045|ENST00000412830|PWP1 36.506200033944 0.094635877243972 4 [EP]{[{M(Oxidation (M))|F}H]|[RQ]}AQT{I|L}{I|L} 9 2 + 43.763 0.0 0.0 4.15 4.15 78.178 0.0 0.0 0.0 11.20573931205849 8.384767769392738 8.384767769392738 9.208187539523747 0 0.6549471895720985 1.0 1.1861818737241734 0.0 [EP]{[{M(Oxidation (M))|F}H]|[RQ]}AQT{I|L}{I|L};[EP]{[{M(Oxidation (M))|F}H]|[RQ]}A[AG]T{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HM]AQT{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HM]A[AG]T{I|L}{I|L};[HA]{[CT]|[{M(Oxidation (M))|F}G]}VS[DP]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K][C(Carbamidomethyl (C))K]{I|L}{I|L};[HA]{[CT]|[{M(Oxidation (M))|F}G]}VS{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P] 4.15;3.2768;3.0874;2.2142;1.3005;1.2739;0.038275 -;-;-;-;-;-;- 494 1 1.029 54886.3 1.0 9002 4838 13828 HBL1_DMSO_200M_050219_2,13842 HBL1_DMSO_200M_050219_2,13842,HPFEAQTLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13843 73.234 76.0 755370.0 25 0 73859.0 + 35005 SQPDLLHQL 9 86 525.7834930173728 1049.5524331015456 2 525.7834960818291 MULTI CID FTMS 0 0 0 13828 871723.5 1.0 0 0.0 15 Unmodified _SQPDLLHQL_ ENSG00000012817|ENST00000317961|KDM5D;ENSG00000073614|ENST00000399788|KDM5A;ENSG00000117139|ENST00000367265|KDM5B;ENSG00000126012|ENST00000375401|KDM5C;ENST00000465402.1_1_X:53230656-53239709:-|nuORF;ENST00000492117.1_1_Y:21877982-21883284:-|nuORF;ENST00000497100.5_1_X:53227940-53240837:-|nuORF;ENST00000544777.1_1_12:442481-443474:-|nuORF;nc|ENSG00000012817|Q9BY66-2|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D;nc|ENSG00000073614|P29375-2|KDM5A;nc|ENSG00000117139|Q9UGL1-2|KDM5B;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C 47.74868867922204 0.0453060283459952 4 {[QS]|[NT]}PD{I|L}{I|L}HQ{I|L} 9 0 + 49.337 0.0 0.0 4.7008 4.7008 78.008 0.0 0.0 0.0 33.697887582883936 7.784919386223663 7.784919386223663 7.501225267834002 0 0.5 1.0457574905606752 0.0 0.6747425010840047 + + {[QS]|[NT]}PD{I|L}{I|L}HQ{I|L};{[QS]|[NT]}{I|L}E[VP]HQ{I|L};{[QS]|[NT]}{I|L}[DP]{I|L}HQ{I|L};{[QS]|[NT]}PD{I|L}{I|L}HAAV;{[QS]|[NT]}PD{I|L}{I|L}H[AG]{I|L};[DP]{I|L}{I|L}A{I|L}D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QS]|[NT]}PD{I|L}[YK]TV;{[QS]|[NT]}{I|L}E[{I|L}T]{[NV]|[RG]}{M(Oxidation (M))|F};{[QS]|[NT]}{I|L}[DP]{I|L}HAAV;{[QS]|[NT]}PD{I|L}[YK]S{I|L} 4.7008;3.9861;3.7965;3.6502;3.1806;3.003;2.9779;2.8861;2.7459;2.5083 +;-;-;-;-;-;-;-;-;- + 373 + 1 1.029 52595.8 1.0 9003 4838 13828 HBL1_DMSO_200M_050219_2,13843 HBL1_DMSO_200M_050219_2,13843,SQPDLLHQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13844 73.236 58.0 1090200.0 25 0 161160.0 40716 VLHFRCLSL 9 85 544.3091277453768 1086.6037025575536 2 544.3091918826103 MULTI CID FTMS 0 0 0 13828 787418.625 0.6055534412400094 4 -0.3599853515625 16 Unmodified _VLHFRCLSL_ ENST00000256707.7_2_2:8869433-8869517:-|nuORF 12.531546534597751 0.4974689918368763 4 {I|L} 1 8 11.783 0.0 0.0 1.0844 0.0 0.0 955.5085925495442 0.0 955.5085925495442 0.0 0.8136364874884983 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0844 + + 17 + 1 1.029 53363.8 1.0 9004 4838 13828 HBL1_DMSO_200M_050219_2,13844 HBL1_DMSO_200M_050219_2,13844,VLHFRCLSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13845 73.239 142.0 853200.0 25 0 93682.0 + 10279 FQYPDTRYL 9 105 601.7961099812477 1201.5776670292953 2 601.7961913943291 MULTI CID FTMS 0 0 0 13828 726706.4375 1.0 0 0.0 17 Unmodified _FQYPDTRYL_ ENSG00000275700|ENST00000619387|AATF 39.94969957227396 0.0757326808254658 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YPD{I|L} 6 3 51.885 0.0 0.0 4.3181 0.0 0.0 0.0 435.1992891901001 435.1992891901001 28.48470831889398 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.3252574989159953 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YPD{I|L} 4.3181 - 886 + 1 1.029 91185.6 1.0 9005 4838 13828 HBL1_DMSO_200M_050219_2,13845 HBL1_DMSO_200M_050219_2,13845,FQYPDTRYL True True FQYPDTRYL 73.238645 601.796191394329 6908962.0 13828.0 ENSG00000275700|ENST00000619387|AATF 4.880144755045573 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13846 73.241 126.0 735110.0 25 0 30494.0 + 26274 NQQLPIESQMV 11 101 643.8247920412803 1285.6350311493604 2 643.8248168826103 MULTI CID FTMS 0 0 0 13828 592672.8125 0.9459316300821892 -3 0.2998275756835937 18 Unmodified _NQQLPIESQMV_ ENSG00000144028|ENST00000323853|SNRNP200 53.40400417844725 0.0987786977674846 4 [AG]NQ{I|L}P{I|L}E{[QS]|[NT]}MV 12 3 + 61.741 0.0 0.0 4.8024 4.8024 79.555 0.0 0.0 0.0 14.059089383433124 11.394615430168995 11.394615430168995 9.09823369650912 0 1.0924778212679485 1.6989700043360187 0.0 1.1307196863200843 [AG]NQ{I|L}P{I|L}E{[QS]|[NT]}MV;[AG]N[AG]{I|L}P{I|L}E{[QS]|[NT]}MV;[AG]GGQ{I|L}P{I|L}E{[QS]|[NT]}MV;{[QN]|[E{I|L}]|[KN]}Q{I|L}P{I|L}E{[QS]|[NT]}MV;[{I|L}P]C(Carbamidomethyl (C)){I|L}P{I|L}E{[QS]|[NT]}MV;{[QN]|[E{I|L}]|[KN]}[AG]{I|L}P{I|L}E{[QS]|[NT]}MV;[{I|L}P][CG]{I|L}P{I|L}E{[QS]|[NT]}MV;[AG]VG[QA]P{I|L}E{[QS]|[NT]}MV;[AG]VQQP{I|L}E{[QS]|[NT]}MV;{[NV]|[RG]}A[QA]P{I|L}E{[QS]|[NT]}MV 4.8024;4.0947;3.9345;3.7088;3.5058;2.9988;2.7957;2.6868;2.6385;2.5856 -;-;-;+;-;-;-;-;-;- + 542 1 1.029 75626.4 1.0 9006 4838 13828 HBL1_DMSO_200M_050219_2,13846 HBL1_DMSO_200M_050219_2,13846,NQQLPIESQMV True True NQQLPIESQMV 73.241241 643.82481688261 19302592.0 13828.0 ENSG00000144028|ENST00000323853|SNRNP200 4.588855425516765 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13847 73.243 49.0 1038800.0 25 0 104470.0 1146 AGVVCLLSTI 10 96 488.27941093069165 974.5442689281832 2 488.2798644900322 MULTI CID FTMS 0 0 0 13828 611491.0625 0.1094347389415385 6 -0.6304779052734375 19 Unmodified _AGVVCLLSTI_ ENSG00000169026|ENST00000322224|SLC49A3;ENST00000512400.1_1_4:675749-678780:-|nuORF;nc|ENSG00000169026|Q6UXD7-3|SLC49A3;nc|ENSG00000169026|Q6UXD7|SLC49A3 21.74664581756881 0.480091245866545 4 {M(Oxidation (M))|F}{I|L}ST{I|L} 5 6 31.198 0.0 0.0 3.2013 0.0 0.0 395.2531605451188 0.0 395.2531605451188 0.0 15.506440778389024 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}{I|L}ST{I|L} 3.2013 - 102 1 1.029 45728.5 1.0 9007 4838 13828 HBL1_DMSO_200M_050219_2,13847 HBL1_DMSO_200M_050219_2,13847,AGVVCLLSTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13848 73.245 111.0 674530.0 25 0 60054.0 + 38260 TPVRLPSI 8 93 441.7741559145741 881.5337588959483 2 441.7741271853447 MULTI CID FTMS 0 0 0 13828 538115.5625 0.5981710373982257 -3 0.2998275756835937 20 Unmodified _TPVRLPSI_ ENSG00000125347|ENST00000245414|IRF1;ENST00000472045.1_1_5:131819645-131819816:-|nuORF 38.17557092003332 0.2648138137323925 4 TPVR{I|L}PS{I|L} 8 0 + 64.537 0.0 0.0 7.321 7.321 91.553 0.0 0.0 0.0 28.865910952045795 14.904630595263413 14.904630595263413 10.0 0 1.024227503252014 1.5228787452803376 0.7742275032520141 0.0 + + TPVR{I|L}PS{I|L};TPVP[R{I|L}]S{I|L} 7.321;6.1866 +;- + 366 + 1 1.029 63734.6 1.0 9008 4838 13828 HBL1_DMSO_200M_050219_2,13848 HBL1_DMSO_200M_050219_2,13848,TPVRLPSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13850 73.256 431.0 501950.0 25 0 42650.0 + 1698 ALPLRLGV 8 157 419.7794029302962 837.5442529273926 2 419.7791320681572 MULTI CID FTMS 0 0 0 13849 401049.90625 0.4538001136197844 3 -0.3260879516601562 1 Unmodified _ALPLRLGV_ ENST00000533871.6_2_11:133801972-133806022:-|nuORF 26.34127834903884 0.4900704351052977 4 [{I|L}A]P{I|L}V 5 3 38.314 0.0 0.0 4.5746 0.0 0.0 0.0 341.1943758600219 341.1943758600219 26.324543621168388 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 [{I|L}A]P{I|L}V 4.5746 - 197 + 1 1.025 171603.9 1.0 9009 4839 13849 HBL1_DMSO_200M_050219_2,13850 HBL1_DMSO_200M_050219_2,13850,ALPLRLGV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13851 73.257 37.0 1477400.0 25 0 125840.0 + 16949 KILQELPSV 9 88 513.8135928197042 1025.6126327062084 2 513.8134643435478 MULTI CID FTMS 0 0 0 13849 1354108.125 1.0 0 0.0 2 Unmodified _KILQELPSV_ ENSG00000163166|ENST00000295321|IWS1;nc|ENSG00000163166|Q96ST2-2|IWS1;nc|ENSG00000163166|Q96ST2-3|IWS1 56.17704186161178 0.0281986971544335 4 [PS]VS{I|L}K{I|L}PSV 10 6 + 82.701 0.0 0.0 8.0636 8.0636 95.536 0.0 0.0 0.0 18.239087409443187 68.72154405477026 18.239087409443187 19.719712763997563 0 1.0924778212679485 1.0969100130080565 1.079689690656103 0.7614393726401688 [PS]VS{I|L}K{I|L}PSV;[VG][DV]{I|L}K{I|L}PSV;[VS]PS{I|L}K{I|L}PSV;[Q{I|L}]E{I|L}K{I|L}PSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}K{I|L}PSV;{[QN]|[E{I|L}]|[KN]}Q{I|L}K{I|L}PSV;{[QN]|[E{I|L}]|[KN]}[AG]{I|L}K{I|L}PSV;[Q{I|L}][K{I|L}]E{I|L}PSV 8.0636;6.1408;6.019;5.8919;5.7701;5.6353;4.7375;3.5942 -;-;-;-;-;-;-;- 221 1 1.025 49640.8 1.0 9010 4839 13849 HBL1_DMSO_200M_050219_2,13851 HBL1_DMSO_200M_050219_2,13851,KILQELPSV True True KILQELPSV 73.257001 513.813464343548 28270016.0 13849.0 ENSG00000163166|ENST00000295321|IWS1;;nc|ENSG00000163166|Q96ST2-2|IWS1;;nc|ENSG00000163166|Q96ST2-3|IWS1 4.883197546005249 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13852 73.258 51.0 1410700.0 25 0 157210.0 + 15607 IPYSPDVQI 9 90 516.2740905813038 1030.5336282294074 2 516.2739745974541 MULTI CID FTMS 0 0 0 13849 1109323.75 0.1372098862473627 -2 0.1696853637695312 3 Unmodified _IPYSPDVQI_ ENSG00000127463|ENST00000477853|EMC1;ENST00000461353.1_1_1:19545799-19546215:-|nuORF;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1 44.40701690623563 0.0526327925666318 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}[DP]V[Q{I|L}] 9 3 + 42.284 0.0 0.0 4.1031 4.1031 69.98 0.0 0.0 0.0 10.737862141609188 19.48745360691396 10.737862141609188 3.0102999566398125 0 0.2887254899964357 1.0 1.024227503252014 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}[DP]V[Q{I|L}];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[DP]V{I|L}[Q{I|L}];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[DP]{I|L}V[Q{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[DP]V[Q{I|L}];[{I|L}P]YS[DP]V[Q{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]V{I|L}[Q{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]{I|L}V[Q{I|L}];[VP]DS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[Q{I|L}];[AG][NS]{[ET]|[MV]}V{I|L}[Q{I|L}];[AG][NS]{[ET]|[MV]}{I|L}V[Q{I|L}] 4.1031;3.811;3.764;2.8406;2.7534;2.5485;2.5015;2.3034;2.1325;2.0855 -;-;-;-;+;-;-;-;-;- + 1513 1 1.025 59089.7 1.0 9011 4839 13849 HBL1_DMSO_200M_050219_2,13852 HBL1_DMSO_200M_050219_2,13852,IPYSPDVQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13853 73.265 379.0 250610.0 25 0 31801.0 + 22425 LPTGGLSAV 9 120 407.7373624372332 813.4601719412664 2 407.7372619509697 MULTI CID FTMS 0 0 0 13849 634033.6875 0.9515702372824058 -2 0.1696853637695312 4 Unmodified _LPTGGLSAV_ REV__ENSG00000172482|ENST00000307503|AGXT 36.04419817259434 0.0971720506436186 4 MTGV 4 -1 19.641 0.0 0.0 2.4145 0.0 0.0 407.2635299508351 0.0 407.2635299508351 0.0 -0.4563496377727531 -0.4563496377727531 0.0 0 0.0 0.0 0.0 0.0 MTGV 2.4145 - 188 + 1 1.025 77322.9 1.0 9012 4839 13849 HBL1_DMSO_200M_050219_2,13853 HBL1_DMSO_200M_050219_2,13853,LPTGGLSAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13854 73.272 402.0 676680.0 25 0 46697.0 + 29331 QIPQVLNQV 9 208 519.8005727838432 1037.5865926344864 2 519.8015014529228 MULTI CID FTMS 0 0 0 13849 457833.09375 0.1801042620315791 -2 0.1696853637695312 5 Unmodified _QIPQVLNQV_ ENSG00000205339|ENST00000379719|IPO7 92.8221339359638 0.0138398038803217 4 [Q{I|L}]PVQNVQ{I|L} 9 4 + 49.399 0.0 0.0 4.761 4.761 67.162 0.0 0.0 0.0 0.5823416233997705 24.21200262035451 0.5823416233997705 0.2680249241196719 0 0.6435078169319297 2.0 0.0 0.8684151806525389 [Q{I|L}]PVQNVQ{I|L};[Q{I|L}]PQVNVQ{I|L};[AG]PV{I|L}QNVQ{I|L};[AG]VP{I|L}QNVQ{I|L};[Q{I|L}]PVNQVQ{I|L};[AG]PV{I|L}NQVQ{I|L};[QP]V{I|L}QNVQ{I|L};[Q{I|L}]NP{I|L}NVQ{I|L};[Q{I|L}]PN{I|L}NVQ{I|L};[AG]VP{I|L}NQVQ{I|L} 4.761;4.7351;4.6482;4.4784;4.2286;4.1158;3.9475;3.9465;3.9465;3.9461 -;-;-;-;-;-;-;-;-;- 5041 1 1.025 206348.0 1.0 9013 4839 13849 HBL1_DMSO_200M_050219_2,13854 HBL1_DMSO_200M_050219_2,13854,QIPQVLNQV True True QIPQVLNQV 73.272362 519.801501452923 23617588.0 13849.0 ENSG00000205339|ENST00000379719|IPO7 5.59926160176595 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13855 73.281 459.0 307080.0 25 0 69458.0 -1 0 86 1089.7854662121144 3266.334569236544 3 1090.119433581829 MULTI CID FTMS 0 0 0 13849 423795.84375 0.6956511323780415 -1 0.0338973999023437 6 4 {[QV]|[N{I|L}]|[RA]|[KV]}AN{I|L}TSAN 9 -1 42.974 0.0 0.0 1.3157 0.0 0.0 0.0 2364.836619367656 2364.836619367656 35.9843534683349 0.0 0.0 0.0 0 0.0 0.0 1.0044321917401078 1.1861818737241734 {[QV]|[N{I|L}]|[RA]|[KV]}AN{I|L}TSAN 1.3157 - 736 1 1.025 118673.1 1.0 9014 4839 13849 HBL1_DMSO_200M_050219_2,13855 HBL1_DMSO_200M_050219_2,13855, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13856 73.288 441.0 292820.0 25 0 15758.0 -1 0 100 864.9376938054527 1727.8608346777053 2 864.9379150271416 MULTI CID FTMS 0 0 0 13849 395849.625 0.7445783310994943 3 -0.3260879516601562 7 4 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ 9 -1 88.326 0.0 0.0 5.1118 0.0 0.0 0.0 731.3479203051654 731.3479203051654 32.83932200095428 0.0 0.0 0.0 0 1.774227503252014 2.0 0.0 1.1989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ 5.1118 - 1273 + 1 1.025 87995.9 1.0 9015 4839 13849 HBL1_DMSO_200M_050219_2,13856 HBL1_DMSO_200M_050219_2,13856, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13857 73.296 454.0 282310.0 25 0 11576.0 -1 0 137 857.9296164380768 1713.8446799429537 2 858.4286987185478 MULTI CID FTMS 0 0 0 13849 394426.0 0.3638599872532861 6 -0.657135009765625 8 4 {[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDAD{[QV]|[N{I|L}]|[RA]|[KV]}P[HA] 16 -1 + 73.049 0.0 0.0 4.2623 4.2623 71.929 0.0 0.0 0.0 7.403626894942448 7.659167939666318 7.403626894942448 3.6991128507179374 0 0.4247425010840047 2.0 0.4247425010840047 1.055462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDAD{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDW{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QWD{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];[NP]{I|L}NA[QP]QDAD{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDAN{I|L}DP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA{M(Oxidation (M))|F}H[PS]AD{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDA[WR]P[HA];[NP]{I|L}NA[QP]QWD{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];[NP]{I|L}NA[QP]QDW{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QWN{I|L}DP[HA] 4.2623;4.0465;4.0465;3.8303;3.7186;3.6788;3.623;3.6145;3.6145;3.5028 -;-;-;-;-;-;-;-;-;- 3651 1 1.025 89605.3 1.0 9016 4839 13849 HBL1_DMSO_200M_050219_2,13857 HBL1_DMSO_200M_050219_2,13857, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13858 73.305 509.0 461950.0 25 0 27613.0 + 29602 QLVPALAKV 9 209 469.806182807267 937.597812681334 2 469.7783996462822 MULTI CID FTMS 0 0 0 13849 204355.015625 0.9857462825327142 3 -0.3260879516601562 9 Unmodified _QLVPALAKV_ ENSG00000158161|ENST00000373871|EYA3;nc|ENSG00000158161|Q99504-2|EYA3;nc|ENSG00000158161|Q99504-3|EYA3;nc|ENSG00000158161|Q99504-4|EYA3;nc|ENSG00000158161|Q99504-5|EYA3 43.85829265575387 0.0542763391141878 4 [Q{I|L}]VSQV 6 5 39.035 0.0 0.0 4.1633 0.0 0.0 0.0 280.20453810541534 280.20453810541534 16.80651811999803 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.5752574989159953 0.6872730750747861 [Q{I|L}]VSQV 4.1633 - 1558 1 1.025 178816.2 1.0 9017 4839 13849 HBL1_DMSO_200M_050219_2,13858 HBL1_DMSO_200M_050219_2,13858,QLVPALAKV True True QLVPALAKV 73.305445 469.778399646282 3254994.75 13849.0 ENSG00000158161|ENST00000373871|EYA3;;nc|ENSG00000158161|Q99504-5|EYA3;;nc|ENSG00000158161|Q99504-2|EYA3;;nc|ENSG00000158161|Q99504-3|EYA3;;nc|ENSG00000158161|Q99504-4|EYA3 6.459162871042888 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13859 73.315 560.0 309920.0 25 0 24263.0 40719 VLHPRVKL 8 191 481.3173108969224 960.6200688606448 2 481.3171874880791 MULTI CID FTMS 0 0 0 13849 260952.734375 1.0 0 0.0 10 Unmodified _VLHPRVKL_ ENST00000250894.8_2_16:1818305-1818896:+|nuORF 2.889219685676258 0.8067950007271085 4 ASV 3 7 17.704 0.0 0.0 1.843 0.0 0.0 685.4720077229584 0.0 685.4720077229584 0.0 5.485836338330856 0.0 0.0 0 0.0 0.0 0.1462566630072955 0.0 ASV 1.843 - 1072 + 1 1.025 133467.7 1.0 9018 4839 13849 HBL1_DMSO_200M_050219_2,13859 HBL1_DMSO_200M_050219_2,13859,VLHPRVKL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13860 73.327 595.0 282740.0 25 0 29645.0 + + 24500 LPFTPRTL 8 171 472.80329656007234 943.5920401869448 2 472.8016235232353 MULTI CID FTMS 0 0 0 13849 227652.671875 1.0 0 0.0 11 Unmodified _MIIRSLLV_ nc|ENSG00000042317|Q9P0W8-3|SPATA7;ENST00000556666.5_1_14:88883017-88904763:+|nuORF;ENST00000553626.5_1_14:88852162-88894100:+|nuORF;ENSG00000042317|ENST00000393545|SPATA7;nc|ENSG00000042317|Q9P0W8-2|SPATA7 17.086550045450526 0.6584923310065985 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KT{M(Oxidation (M))|F}P 7 -1 49.953 0.0 0.0 5.2939 0.0 0.0 0.0 110.10333584981166 110.10333584981166 33.17069316414013 0.0 0.0 0.0 0 0.0 2.0 0.8494850021680094 0.2742275032520141 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}KT{M(Oxidation (M))|F}P 5.2939 - 923 1 1.025 130027.4 1.0 9019 4839 13849 HBL1_DMSO_200M_050219_2,13860 HBL1_DMSO_200M_050219_2,13860,MIIRSLLV False False LPFTPRTL 73.326832 472.801623523235 5887213.875 13849.0 nc|ENSG00000042317|Q9P0W8-3|SPATA7;;ENST00000556666.5_1_14:88883017-88904763:+|nuORF;;ENST00000553626.5_1_14:88852162-88894100:+|nuORF;;ENSG00000042317|ENST00000393545|SPATA7;;nc|ENSG00000042317|Q9P0W8-2|SPATA7 4.296792984008789 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13861 73.337 578.0 187510.0 25 0 21585.0 + + 30524 KVMDDIMASNL 11 136 618.3883317480755 0 618.3879882693291 PEAK CID FTMS 0 0 0 13849 230830.59375 0.7834670440363909 2 -0.2514419555664062 12 Unmodified _REKRHIKLVG_ ENSG00000184867|ENST00000356824|ARMCX2 3.5964929083625545 0.3961065659209837 4 AMTVEDK 7 -1 31.459 0.0 0.0 2.5478 0.0 0.0 331.3425151856737 126.03554712467032 457.378062310344 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.9049471895720984 AMTVEDK 2.5478 - 597 + 1 1.025 82212.4 1.0 9020 4839 13849 HBL1_DMSO_200M_050219_2,13861 HBL1_DMSO_200M_050219_2,13861,REKRHIKLVG False False KVMDDIMASNL 73.336965 618.387988269329 1732959.25 13849.0 ENSG00000184867|ENST00000356824|ARMCX2 1.6965137720108032 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13862 73.348 630.0 538450.0 25 0 34393.0 -1 DATSAHCNL 9 253 494.7094641383868 987.4043753435736 2 494.7096740603447 MULTI CID FTMS 0 0 0 13849 216394.046875 0.6319314584459048 -1 0.0338973999023437 13 Carbamidomethyl (C) _DATSAHC(Carbamidomethyl (C))NL_ AluSx1_dup55852|chr9:120897698-120898003:+|2.603202462862257|0.1801623443081673|3.85|48.0|21|3|anti-sense 19.256988751693697 0.3154191944385105 4 DATV{M(Oxidation (M))|F}T{I|L} 7 -1 49.301 0.0 0.0 4.993 0.0 0.0 0.0 237.0018099420532 237.0018099420532 25.29840696594043 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.4247425010840047 0.0 DATV{M(Oxidation (M))|F}T{I|L} 4.993 - 1133 + 1 1.025 256751.5 1.0 9021 4839 13849 HBL1_DMSO_200M_050219_2,13862 HBL1_DMSO_200M_050219_2,13862,DATSAHCNL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 13863 73.36 638.0 150320.0 25 0 15833.0 + -1 SLGFYVCKVFY 11 129 691.8462073456234 1381.677861758047 2 691.8478271365166 MULTI CID FTMS 0 0 0 13849 207195.15625 1.0 0 0.0 14 Carbamidomethyl (C) _SLGFYVC(Carbamidomethyl (C))KVFY_ REV__ENSG00000154864|ENST00000674853|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5-2|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5-3|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5|PIEZO2 8.155526934196011 0.8366696279279818 4 [EP]WVDTVK 8 -1 35.728 0.0 0.0 2.5859 0.0 0.0 0.0 424.172698423809 424.172698423809 9.507924763926088 0.0 0.0 0.0 0 0.0 0.5228787452803376 0.7134679910804405 0.0 [EP]WVDTVK 2.5859 - 896 1 1.025 73464.9 1.0 9022 4839 13849 HBL1_DMSO_200M_050219_2,13863 HBL1_DMSO_200M_050219_2,13863,SLGFYVCKVFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13864 73.374 800.0 376650.0 25 0 30863.0 + 1336 AKGDGRVV 8 245 401.2334117324416 0 401.2311584353447 PEAK CID FTMS 0 0 0 13849 213536.203125 0.4212780687034153 -4 0.3337249755859375 15 Unmodified _AKGDGRVV_ REV__ENST00000472106.2_1_8:102504814-102555784:+|nuORF 30.22481116460888 0.2280668331718824 4 Q{I|L}C(Carbamidomethyl (C)){I|L}D 5 -1 32.899 0.0 0.0 4.11 0.0 0.0 88.07510534622425 80.05135523013905 168.12646057636329 0.0 0.0 0.0 0.0 0 0.6549471895720985 0.0 2.0356668758921828 0.3252574989159953 Q{I|L}C(Carbamidomethyl (C)){I|L}D 4.11 - 481 + 1 1.025 227519.2 0.9399999976158142 9023 4839 13849 HBL1_DMSO_200M_050219_2,13864 HBL1_DMSO_200M_050219_2,13864,AKGDGRVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13865 73.378 205.0 629640.0 25 0 42743.0 + -1 VAMDLGIDKV 10 145 530.7880279862628 1059.5615030393255 2 530.7890502810478 MULTI CID FTMS 0 0 0 13849 214322.40625 1.0 0 0.0 16 Carbamidomethyl (C) _LGATEC(Carbamidomethyl (C))LLLA_ ENSG00000120800|ENST00000261637|UTP20 19.256988751693697 0.5244284437930726 4 VAMD 4 -1 48.462 0.0 0.0 4.5738 0.0 0.0 0.0 640.3723238580686 640.3723238580686 34.900771417012635 0.0 0.0 0.0 0 0.555462187404089 1.0969100130080565 0.0 0.0 VAMD 4.5738 - 768 + 1 1.025 103977.1 1.0 9024 4839 13849 HBL1_DMSO_200M_050219_2,13865 HBL1_DMSO_200M_050219_2,13865,LGATECLLLA False False VAMDLGIDKV 73.37798 530.789050281048 0.0 13849.0 ENSG00000120800|ENST00000261637|UTP20 2.098011096318563 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13866 73.384 303.0 487440.0 25 0 33442.0 + 22627 LPYNPMMV 8 150 490.7333791043465 979.452205275493 2 490.7423278689384 MULTI CID FTMS 0 0 0 -1 0 17 Oxidation (M) _LPYNPMM(Oxidation (M))V_ ENSG00000004975|ENST00000005340|DVL2 52.69307289633392 0.1265801145616722 4 {[TV]|[{I|L}S]}CA{I|L}PM{M(Oxidation (M))|F}V 9 4 + 57.33 0.0 0.0 5.8532 5.8532 81.442 0.0 0.0 0.0 11.605504720547408 2.727562184969372 2.727562184969372 6.140078085766092 0 0.6237125054200234 2.0 0.0 0.0 {[TV]|[{I|L}S]}CA{I|L}PM{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}{[WT]|[RM]}PM{M(Oxidation (M))|F}V;[{I|L}P]YNPM{M(Oxidation (M))|F}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{I|L}PM{M(Oxidation (M))|F}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}NPM{M(Oxidation (M))|F}V;[TA]MA{I|L}PM{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}V]Q{I|L}PM{M(Oxidation (M))|F}V;[YT]MP{I|L}QPM;[YT]MP{I|L}APGM;[{M(Oxidation (M))|F}V]GA{I|L}PM{M(Oxidation (M))|F}V 5.8532;5.2263;4.6683;4.45;3.8739;3.8209;3.7649;3.4865;3.3575;3.2719 -;-;+;-;-;-;-;-;-;- + 813 1 1.025 115508.8 1.0 9025 4839 13849 HBL1_DMSO_200M_050219_2,13866 HBL1_DMSO_200M_050219_2,13866,LPYNPMMV True False LPYNPMMV 73.383515 490.742327868938 954118.6875 13849.0 ENSG00000004975|ENST00000005340|DVL2 4.990150451660156 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13867 73.397 710.0 325600.0 25 0 16676.0 + 34161 SLMDHTIPEV 10 195 571.2801391121216 1140.545725291043 2 571.2822753787041 MULTI CID FTMS 0 0 0 13849 120211.1953125 0.5434881031920877 -1 0.0338973999023437 18 Unmodified _SLMDHTIPEV_ ENSG00000137575|ENST00000260130|SDCBP;nc|ENSG00000137575|O00560-2|SDCBP;nc|ENSG00000137575|O00560-3|SDCBP 85.27202061508552 0.012747187882667 4 [EP]EE{I|L}S{I|L}PEV 10 6 + 63.695 0.0 0.0 5.5846 5.5846 78.334 0.0 0.0 0.0 4.431890546242343 19.88438100576431 4.431890546242343 4.431890546242343 0 1.0356668758921828 1.3979400086720375 2.3494850021680094 0.0 [EP]EE{I|L}S{I|L}PEV;{[TV]|[{I|L}S]}E[HM]S{I|L}PEV;[EP]EEVT{I|L}PEV;[EP][HC]{I|L}S{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V;[EP]VNMN{I|L}PEV;[EP]VEET{I|L}PEV;[EP]VV{M(Oxidation (M))|F}[EP]PEV;{[TV]|[{I|L}S]}E[EP]E{I|L}PEV;[EP]VDEP{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V;[EP]YGHT{I|L}PEV 5.5846;5.196;5.1272;5.0585;4.7503;4.6888;4.5993;4.5148;4.5082;4.4835 -;-;-;-;-;-;-;-;-;- 5370 1 1.025 176191.8 1.0 9026 4839 13849 HBL1_DMSO_200M_050219_2,13867 HBL1_DMSO_200M_050219_2,13867,SLMDHTIPEV True True SLMDHTIPEV 73.397013 571.282275378704 2481570.0 13849.0 nc|ENSG00000137575|O00560-2|SDCBP;;ENSG00000137575|ENST00000260130|SDCBP;;nc|ENSG00000137575|O00560-3|SDCBP 5.653532822926839 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13868 73.411 800.0 107500.0 25 0 6540.8 -1 0 132 669.360933787961 668.353657321361 1 671.3665038943291 MULTI CID FTMS 0 0 0 13849 109587.71875 1.0 0 0.0 19 4 [AG]Y{M(Oxidation (M))|F}V{I|L} 6 -1 + 20.652 0.0 0.0 3.0899 3.0899 76.855 0.0 0.0 0.0 5.249027791838019 -0.2903679333319786 -0.2903679333319786 11.532125137753429 0 0.1989700043360188 2.0 0.0 0.0 [AG]Y{M(Oxidation (M))|F}V{I|L};[AG]PG{[SA]|[TG]}[{I|L}P];[YQ]{M(Oxidation (M))|F}V{I|L};[AG]P{[QS]|[NT]}[{I|L}P];[Y{M(Oxidation (M))|F}]QV{I|L};[AG]PKP{[CP]|[EA]} 3.0899;1.3645;1.1485;1.1193;0.88503;0.10585 -;-;-;-;-;- 287 1 1.025 67513.5 0.9399999976158142 9027 4839 13849 HBL1_DMSO_200M_050219_2,13868 HBL1_DMSO_200M_050219_2,13868, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13869 73.425 800.0 100030.0 25 0 6159.5 28594 PTYAMSNLFSI 11 144 622.3030612301465 1242.5915695270928 2 622.3024169802666 MULTI CID FTMS 0 0 0 13849 93281.8046875 0.2464399748855629 3 -0.3260879516601562 20 Unmodified _PTYAMSNLFSI_ nc|ENSG814|P63133|ERVK-8_pol;nc|ENSG821|P63135|ERVK-7_pol;nc|ENSG826|Q9BXR3|ERVK-6_gag;nc|ENSG832|P63136|ERVK-25_pol;nc|ENSG844|Q9WJR5|ERVK-19_pol;nc|ENSG851|Q9QC07|ERVK-18_pol;nc|ENSG853|Q9UQG0|ERVK-11;nc|ENSG855|P10266|ERVK-10_pol 13.042465956692816 0.7638483625850725 4 [YT]P{M(Oxidation (M))|F}{I|L} 5 7 24.283 0.0 0.0 1.9542 0.0 0.0 0.0 618.2412471203565 618.2412471203565 8.508337601396853 0.0 0.0 0.0 0 0.0 1.0 0.5866968715561641 0.0 [YT]P{M(Oxidation (M))|F}{I|L} 1.9542 - 606 1 1.025 65962.1 0.9200000166893004 9028 4839 13849 HBL1_DMSO_200M_050219_2,13869 HBL1_DMSO_200M_050219_2,13869,PTYAMSNLFSI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 13871 73.429 0.96 36234000.0 25 0 4450900.0 + 6272 DTVEPWVKV 9 74 536.7876595663572 1071.5607661995143 2 536.7885009646416 MULTI CID FTMS 0 0 0 13870 38740272.0 0.2270457747324137 3 -0.2960281372070312 1 Unmodified _DTVEPWVKV_ REV__ENSG00000155275|ENST00000389737|TRMT44;REV__nc|ENSG00000155275|Q8IYL2-2|TRMT44 15.847184025352805 0.4077185912009129 4 [EP]WVKVDTV 9 -1 + 44.046 0.0 0.0 4.1105 4.1105 76.125 0.0 0.0 0.0 5.642492736872597 23.750612633917 5.642492736872597 8.010299956639805 0 0.8182503180159344 0.0 0.0 0.0 [EP]WVKVDTV;[EP]WVDTVKV;{[MG]|[TS]}[HS]VKVDTV;[W{M(Oxidation (M))|F}]VR[HQ]TV;[EP]WV[WR]TV;{[MG]|[TS]}[HS]VDTVKV;{[QV]|[N{I|L}]|[RA]|[KV]}[EP]WVDTV;[W{M(Oxidation (M))|F}]V[VG][HQ]TV;[W{M(Oxidation (M))|F}]VK[KA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[DV]W[EP]TVKV 4.1105;3.3629;2.8798;2.6471;2.3179;2.1322;2.0797;1.7827;1.1091;0.9608 -;-;-;-;-;-;-;-;-;- 141 1 1.029 32451.5 1.0 9029 4840 13870 HBL1_DMSO_200M_050219_2,13871 HBL1_DMSO_200M_050219_2,13871,DTVEPWVKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13872 73.43 20.0 1917900.0 25 0 269900.0 + 42800 VVITEKGISDL 11 65 587.3404068052944 1172.666260677389 2 587.3401367068291 MULTI CID FTMS 0 0 0 13870 1693085.25 0.2383851018080522 1 -0.07147216796875 2 Unmodified _VVITEKGISDL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 28.49450938151212 0.4231428536161201 4 VV{I|L}TE 5 6 53.456 0.0 0.0 4.5585 0.0 0.0 0.0 628.3310030572874 628.3310030572874 27.710215427001827 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + VV{I|L}TE 4.5585 + + 168 + 1 1.029 35109.2 1.0 9030 4840 13870 HBL1_DMSO_200M_050219_2,13872 HBL1_DMSO_200M_050219_2,13872,VVITEKGISDL False True VVITEKGISDL 73.430223 587.340136706829 98150568.0 13870.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 5.265623251597087 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13873 73.431 32.0 1518600.0 25 0 158960.0 + 35115 SQWEDIHVV 9 76 556.7723928680358 1111.5302328028715 2 556.7723876833916 MULTI CID FTMS 0 0 0 13870 1480376.625 0.7647586702473752 -1 0.1799697875976562 3 Unmodified _SQWEDIHVV_ ENSG00000075884|ENST00000295095|ARHGAP15;ENST00000549436.5_1_2:144276854-144461094:+|nuORF 42.09456458481378 0.0639583784996157 4 [HV]EEVW 6 7 33.945 0.0 0.0 3.0539 0.0 0.0 0.0 329.1477044540955 329.1477044540955 -0.4137052840692305 0.0 -0.4137052840692305 0.0 0 0.0 1.154901959985743 0.0 0.0 [HV]EEVW 3.0539 - 352 1 1.029 42757.1 1.0 9031 4840 13870 HBL1_DMSO_200M_050219_2,13873 HBL1_DMSO_200M_050219_2,13873,SQWEDIHVV True True SQWEDIHVV 73.4314 556.772387683392 24945370.0 13870.0 ENSG00000075884|ENST00000295095|ARHGAP15;;ENST00000549436.5_1_2:144276854-144461094:+|nuORF 6.131464163462321 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13874 73.433 45.0 1621200.0 25 0 230280.0 + 45911 YYTPDRMVL 9 80 579.2866821018413 1156.5588112704825 2 579.2867309451103 MULTI CID FTMS 0 0 0 13870 1469411.0 0.8686994598159303 -1 0.1799697875976562 4 Unmodified _YYTPDRMVL_ ENSG00000165688|ENST00000371717|PMPCA;ENST00000462616.1_1_9:139311477-139313651:+|nuORF;nc|ENSG00000165688|Q10713-2|PMPCA 47.74868867922204 0.0453060283459952 4 YYTPD 5 4 69.196 0.0 0.0 5.9829 0.0 0.0 0.0 514.2839449518186 514.2839449518186 55.70107520596089 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.5 0.0 + YYTPD 5.9829 + + 56 + 1 1.029 62800.4 1.0 9032 4840 13870 HBL1_DMSO_200M_050219_2,13874 HBL1_DMSO_200M_050219_2,13874,YYTPDRMVL True True YYTPDRMVL 73.432648 579.28673094511 36431760.0 13870.0 ENSG00000165688|ENST00000371717|PMPCA;;ENST00000462616.1_1_9:139311477-139313651:+|nuORF;;nc|ENSG00000165688|Q10713-2|PMPCA 5.845338185628255 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13875 73.434 66.0 1456600.0 25 0 154910.0 + 32584 SAVELPKI 8 75 428.7608690880684 855.5071852429369 2 428.7606994509697 MULTI CID FTMS 0 0 0 13870 1033549.625 0.8352441774871288 -1 0.1799697875976562 5 Unmodified _SAVELPKI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-4|BRCC3;nc|ENSG00000185515|P46736|BRCC3 30.63653989081413 0.3996269429323407 4 {[SA]|[TG]}VE{I|L}PK{I|L} 8 0 + 66.463 0.0 0.0 7.7689 7.7689 86.237 0.0 0.0 0.0 48.04699171237935 2.741822736656588 2.741822736656588 4.771212547196626 0 0.7302046884880937 2.0 0.4247425010840047 0.0 + + {[SA]|[TG]}VE{I|L}PK{I|L};{[SA]|[TG]}V{I|L}EPK{I|L};{[SA]|[TG]}VE{I|L}{I|L}[KP];{[SA]|[TG]}V{I|L}E{I|L}[KP];[KP]{I|L}{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]K{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7.7689;7.2112;6.6575;6.0998;0.63991;0.23735 +;-;-;-;-;- + 119 + 1 1.029 80393.8 1.0 9033 4840 13870 HBL1_DMSO_200M_050219_2,13875 HBL1_DMSO_200M_050219_2,13875,SAVELPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13876 73.436 53.0 983240.0 25 0 120220.0 + 2842 AVANEEGFVRL 11 63 602.8213059386118 1203.6280589440237 2 602.8204833865166 MULTI CID FTMS 0 0 0 13870 928071.6875 0.8142144791551861 -1 0.1799697875976562 6 Unmodified _AVANEEGFVRL_ ENSG00000143476|ENST00000366991|DTL;nc|ENSG00000143476|Q9NZJ0-2|DTL 43.9818466556824 0.1510575460884947 4 {[VA]|[{I|L}G]}ANEEG{M(Oxidation (M))|F}V[R{I|L}] 11 0 + 91.542 0.0 0.0 7.6055 7.6055 87.911 0.0 0.0 0.0 71.03877580631169 7.367585652254178 7.367585652254178 6.575773191777927 0 0.8494850021680094 2.0 0.0 0.805462187404089 + + {[VA]|[{I|L}G]}ANEEG{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}ANEW{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}AGGEEG{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}AGGEW{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}ANEE[R{M(Oxidation (M))|F}][R{I|L}];{[VA]|[{I|L}G]}[WQ]EG{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}AGGEE[R{M(Oxidation (M))|F}][R{I|L}];{[VA]|[{I|L}G]}A[TP]{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}[WQ]W{M(Oxidation (M))|F}V[R{I|L}];{[VA]|[{I|L}G]}[WQ]E[R{M(Oxidation (M))|F}][R{I|L}] 7.6055;7.0591;6.8471;6.2977;5.7514;5.0822;4.99;4.7399;4.5395;3.2318 +;-;-;-;-;-;-;-;-;- + 137 + 1 1.029 43392.0 1.0 9034 4840 13870 HBL1_DMSO_200M_050219_2,13876 HBL1_DMSO_200M_050219_2,13876,AVANEEGFVRL False True AVANEEGFVRL 73.435604 602.820483386517 21822282.0 13870.0 nc|ENSG00000143476|Q9NZJ0-2|DTL;;ENSG00000143476|ENST00000366991|DTL 5.745998859405518 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13877 73.437 61.0 1134100.0 25 0 76569.0 -1 IPTCMGFGV 9 117 499.2277038682872 996.4408548033744 2 499.2280761599541 MULTI CID FTMS 0 0 0 13870 732967.25 1.0 0 0.0 7 Carbamidomethyl (C),Oxidation (M) _IPTC(Carbamidomethyl (C))M(Oxidation (M))GFGV_ ENSG00000105053|ENST00000316763|VRK3;ENST00000594090.5_1_19:50491627-50519408:-|nuORF;ENST00000600284.5_1_19:50490096-50500767:-|nuORF;nc|ENSG00000105053|Q8IV63-2|VRK3;nc|ENSG00000105053|Q8IV63-3|VRK3 13.50788311687929 0.4710407108020397 4 [QA]Y 3 -1 23.077 0.0 0.0 2.3159 0.0 0.0 0.0 631.2591280790181 631.2591280790181 -0.6537868696485383 0.0 -0.6537868696485383 0.0 0 0.0 2.0 0.0 0.2134679910804404 [QA]Y 2.3159 - 212 1 1.029 55845.3 1.0 9035 4840 13870 HBL1_DMSO_200M_050219_2,13877 HBL1_DMSO_200M_050219_2,13877,IPTCMGFGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13878 73.438 36.0 1684000.0 25 0 149590.0 + 1097 LPYSPRVLV 9 99 522.295914562917 1042.577276192634 2 522.2967407107353 MULTI CID FTMS 0 0 0 13870 594486.4375 0.9885477785436172 1 -0.07147216796875 8 Unmodified _AGLVTARENL_ ENSG00000188603|ENST00000636147|CLN3;nc|ENSG00000261832|Q13286-3|CLN3;nc|ENSG00000261832|Q13286-4|CLN3;ENST00000566083.6_2_16:28493835-28503080:-|nuORF;nc|ENSG00000261832|Q13286-7|CLN3;ENST00000564574.5_2_16:28493646-28503072:-|nuORF;nc|ENSG00000261832|Q13286-2|CLN3;nc|ENSG00000261832|Q13286-5|CLN3 10.073929032068715 0.6785112666868882 4 {[QN]|[E{I|L}]|[KN]}K[{I|L}V]SYP 8 9 21.805 0.0 0.0 2.0915 0.0 0.0 0.0 110.02101334686134 110.02101334686134 2.1393120610256275 0.0 0.0 0.0 0 0.1382104921644452 0.6777807052660807 0.0 0.0 {[QN]|[E{I|L}]|[KN]}K[{I|L}V]SYP 2.0915 - 194 1 1.029 54214.9 1.0 9036 4840 13870 HBL1_DMSO_200M_050219_2,13878 HBL1_DMSO_200M_050219_2,13878,AGLVTARENL False False LPYSPRVLV 73.438288 522.296740710735 10917202.0 13870.0 ENSG00000188603|ENST00000636147|CLN3;;nc|ENSG00000261832|Q13286-3|CLN3;;nc|ENSG00000261832|Q13286-4|CLN3;;ENST00000566083.6_2_16:28493835-28503080:-|nuORF;;nc|ENSG00000261832|Q13286-7|CLN3;;ENST00000564574.5_2_16:28493646-28503072:-|nuORF;;nc|ENSG00000261832|Q13286-2|CLN3;;nc|ENSG00000261832|Q13286-5|CLN3 2.126992712418238 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13879 73.44 59.0 1116900.0 25 0 110670.0 + 6677 EAYLSRLGV 9 94 504.280140918406 0 504.2800170779228 PEAK CID FTMS 0 0 0 13870 575366.5 0.6365571471640082 -1 0.1799697875976562 9 Unmodified _EAYLSRLGV_ ENSG00000114491|ENST00000232607|UMPS;nc|ENSG00000114491|P11172-2|UMPS;nc|ENSG00000114491|P11172-3|UMPS;nc|ENSG00000114491|P11172-4|UMPS 36.12702656103203 0.0807574182900477 4 Y{I|L}S 3 6 23.698 0.0 0.0 2.3544 0.0 0.0 200.08065350036708 440.26300989322505 640.3436633935921 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 + Y{I|L}S 2.3544 + + 74 + 1 1.029 58220.5 1.0 9037 4840 13870 HBL1_DMSO_200M_050219_2,13879 HBL1_DMSO_200M_050219_2,13879,EAYLSRLGV True True EAYLSRLGV 73.439758 504.280017077923 7214591.5 13870.0 nc|ENSG00000114491|P11172-3|UMPS;;nc|ENSG00000114491|P11172-2|UMPS;;ENSG00000114491|ENST00000232607|UMPS;;nc|ENSG00000114491|P11172-4|UMPS 4.06350843111674 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13880 73.443 155.0 530640.0 25 0 100710.0 + 23729 LTVLRRAHGQ 10 95 575.8430692907657 1149.6715856483313 2 575.8432494997978 MULTI CID FTMS 0 0 0 13870 557397.75 0.3806619337554049 4 -0.4166107177734375 10 Unmodified _LTVLRRAHGQ_ REV__ENST00000543873.6_1_12:57503871-57504054:-|nuORF 1.6526216038709556 0.7189921496796233 4 Y 1 -1 10.089 0.0 0.0 0.87752 0.0 0.0 968.597486992861 0.0 968.597486992861 0.0 8.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.87752 - 14 + 1 1.029 70368.5 1.0 9038 4840 13870 HBL1_DMSO_200M_050219_2,13880 HBL1_DMSO_200M_050219_2,13880,LTVLRRAHGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13881 73.447 204.0 400490.0 25 0 40908.0 -1 0 108 959.113057108936 2874.3173419270083 3 959.4460937380792 MULTI CID FTMS 0 0 0 13870 529676.625 0.1668401183303628 5 -0.4771652221679687 11 4 [TP]E{I|L}DQYR 8 -1 43.51 0.0 0.0 1.5138 0.0 0.0 0.0 1868.817673836246 1868.817673836246 15.34440644703906 0.0 0.0 0.0 0 1.0 0.0 0.7302046884880937 0.0 [TP]E{I|L}DQYR 1.5138 - 4223 1 1.029 62020.9 1.0 9039 4840 13870 HBL1_DMSO_200M_050219_2,13881 HBL1_DMSO_200M_050219_2,13881, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13882 73.448 65.0 997500.0 25 0 159540.0 12547 GVGTILSNVL 10 98 486.7902111615527 971.5658693899054 2 486.7899658083916 MULTI CID FTMS 0 0 0 13870 523433.4375 0.4144343943529993 -2 0.2138671875 12 Unmodified _GVGTILSNVL_ ENSG00000111490|ENST00000539867|TBC1D30;nc|ENSG00000288591|Q9Y2I9-3|TBC1D30 52.268347100219714 0.0668375294751462 4 {[DA]|[EG]}K{I|L}{I|L}SN[{I|L}V] 9 3 + 54.671 0.0 0.0 5.6271 5.6271 75.204 0.0 0.0 0.0 2.552725051033065 7.147642715192504 2.552725051033065 2.552725051033065 0 0.0 1.0969100130080565 1.1549471895720984 0.4247425010840047 {[DA]|[EG]}K{I|L}{I|L}SN[{I|L}V];{[TV]|[{I|L}S]}N{I|L}{I|L}SN[{I|L}V];{[DA]|[EG]}K{I|L}VTN[{I|L}V];{[DA]|[EG]}K{I|L}{I|L}SGG[{I|L}V];[NS]{I|L}{I|L}{I|L}SN[{I|L}V];{[TV]|[{I|L}S]}N{I|L}VTN[{I|L}V];{[TV]|[{I|L}S]}N{I|L}{I|L}SGG[{I|L}V];{[TV]|[{I|L}S]}GG{I|L}{I|L}SN[{I|L}V];[TA]AA{I|L}{I|L}SN[{I|L}V];{I|L}{I|L}[NS]{I|L}SN[{I|L}V] 5.6271;5.3643;4.6976;4.6793;4.5978;4.4348;4.4166;4.4166;3.9781;3.8212 -;-;-;-;-;-;-;-;-;- 830 1 1.029 53946.3 1.0 9040 4840 13870 HBL1_DMSO_200M_050219_2,13882 HBL1_DMSO_200M_050219_2,13882,GVGTILSNVL True True DAKILSNVI 73.448312 486.789965808392 22190302.0 13870.0 nc|ENSG00000174485|Q7Z401|DENND4A;;ENSG00000174485|ENST00000443035|DENND4A;;nc|ENSG00000174485|Q7Z401-2|DENND4A 3.456890344619751 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13883 73.452 178.0 410480.0 25 0 25232.0 + 24804 MPIYPTYNEV 10 113 613.7915512600833 1225.5685495869666 2 613.7920410037041 MULTI CID FTMS 0 0 0 13870 474210.5625 0.5806099482641778 1 -0.07147216796875 13 Unmodified _MPIYPTYNEV_ ENSG00000124201|ENST00000396105|ZNFX1;nc|ENSG00000124201|Q9P2E3-2|ZNFX1 34.40172386719151 0.2166836008404837 4 [{I|L}P]MY[TP]YNEV 10 2 + 49.116 0.0 0.0 4.0076 4.0076 68.544 0.0 0.0 0.0 5.892747907840018 8.67931555708239 5.892747907840018 2.482101837575037 0 0.7231975075880329 1.3010299956639813 0.5 0.5 [{I|L}P]MY[TP]YNEV;[{I|L}P]SAY[NG]YNEV;[{I|L}P]YM[TP]YNEV;[TP]VAY[NG]YNEV;[{M(Oxidation (M))|F}V]NY[TP]Y[HS]V;[VP]TAY[NG]YNEV;[{I|L}P]SAY[NG]YGGEV;[TP]YN{[QV]|[N{I|L}]|[RA]|[KV]}YNEV;[{I|L}P]MY[TP]YGGEV;[{M(Oxidation (M))|F}V]NY[TP]MQQV 4.0076;3.8051;3.762;3.5268;3.2994;3.291;3.0603;3.0053;2.8519;2.8301 -;-;-;-;-;-;-;-;-;- 1179 1 1.029 62912.2 1.0 9041 4840 13870 HBL1_DMSO_200M_050219_2,13883 HBL1_DMSO_200M_050219_2,13883,MPIYPTYNEV False True MPIYPTYNEV 73.45179 613.792041003704 19620616.0 13870.0 nc|ENSG00000124201|Q9P2E3-2|ZNFX1;;ENSG00000124201|ENST00000396105|ZNFX1 7.588330109914144 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13884 73.454 93.0 620100.0 25 0 39563.0 22383 LPSSSPVPIPV 11 98 546.8172236951062 1091.6198944570124 2 546.8213989138603 MULTI CID FTMS 0 0 0 13870 480844.75 0.6576058819341121 6 -0.6139068603515625 14 Unmodified _LPSSSPVPIPV_ ENSG00000110497|ENST00000683756|AMBRA1;nc|ENSG00000110497|Q9C0C7-2|AMBRA1;nc|ENSG00000110497|Q9C0C7-3|AMBRA1;nc|ENSG00000110497|Q9C0C7-4|AMBRA1;nc|ENSG00000110497|Q9C0C7-5|AMBRA1 19.256988751693697 0.6345794173041263 4 [{I|L}P]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TPPV{I|L} 10 7 + 35.603 0.0 0.0 3.2615 3.2615 63.799 0.0 0.0 0.0 1.0604819472936455 7.626656038284445 1.0604819472936455 1.0604819472936455 0 1.0598943791441968 1.0457574905606752 0.0 0.0 [{I|L}P]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}TPPV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V{[{M(Oxidation (M))|F}H]|[RQ]}GPPV{I|L};[{I|L}P]{[SA]|[TG]}[TP]TPPV{I|L};[{I|L}P]P[QT]MPPV{I|L};[{I|L}P]{[SA]|[TG]}{[QN]|[E{I|L}]|[KN]}GPPV{I|L};[{I|L}P][{I|L}T]{[DA]|[EG]}GPPV{I|L};[{I|L}T]{I|L}P{[DA]|[EG]}GPPV{I|L};[{I|L}T][PG][TP]TPPV{I|L};[{I|L}V]N{[{M(Oxidation (M))|F}H]|[RQ]}GPPV{I|L};{[TV]|[{I|L}S]}[PA][TP]TPPV{I|L} 3.2615;3.1644;2.6252;2.6212;2.1881;2.1672;2.1414;2.0958;2.08;1.7337 -;-;-;-;-;-;-;-;-;- 274 1 1.029 49771.7 1.0 9042 4840 13870 HBL1_DMSO_200M_050219_2,13884 HBL1_DMSO_200M_050219_2,13884,LPSSSPVPIPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13885 73.456 86.0 810260.0 25 0 96186.0 + 1397 ALATLIHQV 9 111 483.2922423373641 964.5699317415282 2 483.2926513552666 MULTI CID FTMS 0 0 0 13870 448962.53125 1.0 0 0.0 15 Unmodified _ALATLIHQV_ ENSG00000111652|ENST00000543155|COPS7A 49.93300154707207 0.0405168250806675 4 [{I|L}A]AT{I|L}{I|L}HQV 9 0 + 66.958 0.0 0.0 6.9418 6.9418 86.155 0.0 0.0 0.0 27.14764271519251 6.62757831681575 6.62757831681575 6.62757831681575 0 0.9489700043360187 2.0 0.0 0.2396518287104437 + + [{I|L}A]AT{I|L}{I|L}HQV;[{I|L}A]AT{I|L}{I|L}HN{I|L};[{I|L}A]AT{I|L}{I|L}HAGV;[{I|L}A]AT{I|L}{I|L}HGG{I|L};[{I|L}A]AT{I|L}[YK]SV 6.9418;6.2547;5.8866;5.0516;4.5925 +;-;-;-;- + 335 + 1 1.029 61613.8 1.0 9043 4840 13870 HBL1_DMSO_200M_050219_2,13885 HBL1_DMSO_200M_050219_2,13885,ALATLIHQV True True ALATLIHQV 73.455748 483.292651355267 3907912.25 13870.0 ENSG00000111652|ENST00000543155|COPS7A 6.750306129455566 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13886 73.458 78.0 927700.0 25 0 151690.0 + -1 TVLSGHWSV 9 101 493.2624188697274 984.510284806255 2 493.2590820193291 MULTI CID FTMS 0 0 0 13870 402007.09375 1.0 0 0.0 16 Carbamidomethyl (C) _SLGC(Carbamidomethyl (C))LHSVL_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000487364.1_1_19:19771386-19774475:-|nuORF 23.1484247019978 0.2366544122328345 4 {[TV]|[{I|L}S]}{I|L}[YN]{I|L}S 7 -1 36.611 0.0 0.0 3.7187 0.0 0.0 0.0 191.0579012506469 191.0579012506469 21.394163134305444 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}[YN]{I|L}S 3.7187 - 135 + 1 1.029 61541.2 1.0 9044 4840 13870 HBL1_DMSO_200M_050219_2,13886 HBL1_DMSO_200M_050219_2,13886,SLGCLHSVL False False TVLSGHWSV 73.457529 493.259082019329 1369393.5 13870.0 ENSG00000105726|ENST00000357324|ATP13A1;;ENST00000487364.1_1_19:19771386-19774475:-|nuORF 4.716148376464844 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13887 73.469 651.0 283110.0 25 0 73038.0 -1 0 74 1162.7987859000227 3485.374528300268 3 1163.460986316204 MULTI CID FTMS 0 0 0 13870 356513.59375 0.0026206231143259 14 -1.351776123046875 17 4 {M(Oxidation (M))|F}YC(Carbamidomethyl (C))QQEVH 8 -1 17.049 0.0 0.0 0.48917 0.0 0.0 1309.5097344543683 1081.4383028619752 2390.948037316344 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 {M(Oxidation (M))|F}YC(Carbamidomethyl (C))QQEVH 0.48917 - 245 + 1 1.029 151983.1 1.0 9045 4840 13870 HBL1_DMSO_200M_050219_2,13887 HBL1_DMSO_200M_050219_2,13887, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13888 73.48 606.0 442650.0 25 0 52345.0 8006 EMLLIILVY 9 197 553.8318930252258 1105.6492331172517 2 553.8265869021416 MULTI CID FTMS 0 0 0 13870 270620.5625 0.0324632650764874 -9 0.9519577026367188 18 Unmodified _EMLLIILVY_ ENSG00000253598|ENST00000518568|SLC10A5 36.04419817259434 0.0971720506436186 4 {NN|[MP]|[D{I|L}]|[EV]}KRS{I|L}{I|L}YV 9 6 + 61.543 0.0 0.0 5.5663 5.5663 79.606 0.0 0.0 0.0 3.1395981121072367 19.2361272524427 3.1395981121072367 5.627269249252137 0 0.0 0.8538719643217619 1.4674165578762484 0.0 {NN|[MP]|[D{I|L}]|[EV]}KRS{I|L}{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}KSR{I|L}{I|L}YV;{I|L}{I|L}SKDR{I|L}YV;{[QN]|[E{I|L}]|[KN]}AAKS{I|L}{I|L}YV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}RS{I|L}{I|L}YV;[KS]DR{I|L}{I|L}{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}KRS{I|L}Y{I|L}V;{[TV]|[{I|L}S]}[VG]RS{I|L}{I|L}YV;[KS]D{I|L}R{I|L}{I|L}YV;[{I|L}T]AARS{I|L}{I|L}YV 5.5663;5.0573;4.9507;4.9054;4.9016;4.8067;4.7904;4.7572;4.638;4.5783 -;-;-;-;-;-;-;-;-;- 6337 1 1.029 203507.2 1.0 9046 4840 13870 HBL1_DMSO_200M_050219_2,13888 HBL1_DMSO_200M_050219_2,13888,EMLLIILVY True False ILSKDGVLYV 73.479521 553.826586902142 5574741.0 13870.0 ENST00000454465.1_1_2:87398353-87423749:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 4.71693483988444 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13889 73.491 639.0 451510.0 25 0 44801.0 + 30957 RKTERLQYK 9 193 611.3558527162176 1220.697152499235 2 611.3538696169853 MULTI CID FTMS 0 0 0 13870 240540.296875 0.2299066130984791 -6 0.618011474609375 19 Unmodified _RKTERLQYK_ REV__ENSG00000133247|ENST00000255613|KMT5C 6.723162845929126 0.6799819581413107 4 {I|L} 1 -1 9.6041 0.0 0.0 0.78677 0.0 0.0 1089.6020882675928 0.0 1089.6020882675928 0.0 -0.0736162841035348 -0.0736162841035348 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.78677 + + 126 + 1 1.029 209668.7 1.0 9047 4840 13870 HBL1_DMSO_200M_050219_2,13889 HBL1_DMSO_200M_050219_2,13889,RKTERLQYK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13890 73.496 296.0 443370.0 25 0 57689.0 + 33622 SIQYETDASL 10 161 563.7671727838999 1125.5197926345998 2 563.7679931521416 MULTI CID FTMS 0 0 0 13870 214573.1875 0.0545218967961588 4 -0.4166107177734375 20 Unmodified _SIQYETDASL_ REV__ENSG00000111799|ENST00000322507|COL12A1;REV__nc|ENSG00000111799|Q99715-4|COL12A1 20.41453444215458 0.5050059513928961 4 [Y{I|L}]DAKV{I|L}A 8 -1 39.685 0.0 0.0 3.5259 0.0 0.0 0.0 249.0001751586272 249.0001751586272 17.742651638434644 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [Y{I|L}]DAKV{I|L}A 3.5259 - 2521 1 1.029 103815.4 1.0 9048 4840 13870 HBL1_DMSO_200M_050219_2,13890 HBL1_DMSO_200M_050219_2,13890,SIQYETDASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13892 73.501 4.9 12409000.0 25 0 1794000.0 21657 LPLKLSHV 8 73 453.7924634572879 0 453.7924377322197 PEAK CID FTMS 0 0 0 13891 11613763.0 0.3580835227899191 7 -0.7221832275390625 1 Unmodified _LPLKLSHV_ ENSG00000173621|ENST00000309602|LRFN4 15.847184025352805 0.4758297917908462 4 P{I|L}W[{I|L}T]{I|L} 6 5 19.654 0.0 0.0 2.1703 0.0 0.0 113.08383386990404 66.03570734195546 179.11954121185948 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L}W[{I|L}T]{I|L} 2.1703 - 39 + 1 1.039 52064.1 1.0 9049 4841 13891 HBL1_DMSO_200M_050219_2,13892 HBL1_DMSO_200M_050219_2,13892,LPLKLSHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13893 73.502 5.0 11178000.0 25 0 1354300.0 + 44056 YIPTELDQV 9 76 539.2767777714703 1076.5390026097405 2 539.2766601443291 MULTI CID FTMS 0 0 0 13891 10287657.0 1.0 0 0.0 2 Unmodified _YIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 21.74664581756881 0.2544899275067181 4 [TP]E{I|L}DQ 6 3 46.942 0.0 0.0 4.3605 0.0 0.0 0.0 390.2047490299155 390.2047490299155 24.494784489444967 0.0 0.0 0.0 0 0.0 1.0 1.4802046884880935 0.0 + [TP]E{I|L}DQ 4.3605 + + 226 1 1.039 50496.1 1.0 9050 4841 13891 HBL1_DMSO_200M_050219_2,13893 HBL1_DMSO_200M_050219_2,13893,YIPTELDQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13894 73.503 14.0 3124000.0 25 0 285480.0 + 41568 VPPEILNNV 9 70 497.7825498997915 993.550546866383 2 497.7823669314384 MULTI CID FTMS 0 0 0 13891 3845816.25 0.4504684463167877 6 -0.6518096923828125 3 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 46.020951573049366 0.0490941689151868 4 [EP]{I|L}PV{I|L}NNV 9 4 + 49.116 0.0 0.0 4.9435 4.9435 68.411 0.0 0.0 0.0 0.5115252244738144 7.830145895351848 0.5115252244738144 0.5115252244738144 0 1.024227503252014 0.0 0.0 0.0 [EP]{I|L}PV{I|L}NNV;[VP][EP]{I|L}{I|L}NNV;[EP]{I|L}P{I|L}VNNV;[EP]P{I|L}V{I|L}NNV;[EP]{I|L}PVQVNV;[VP][EP]{I|L}QVNV;[EP]{I|L}PV{I|L}GGNV;[VP][EP]{I|L}{I|L}GGNV;[EP]P{I|L}{I|L}VNNV;[EP]{I|L}{I|L}PVNNV 4.9435;4.892;4.6405;4.24;4.213;4.1615;4.0167;3.9652;3.937;3.937 -;+;-;-;-;-;-;-;-;- + 361 1 1.039 41268.3 1.0 9051 4841 13891 HBL1_DMSO_200M_050219_2,13894 HBL1_DMSO_200M_050219_2,13894,VPPEILNNV True True VPPEILNNV 73.502875 497.782366931438 602408352.0 13891.0 ENSG00000198730|ENST00000361367|CTR9 6.583185354868571 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13895 73.504 35.0 2078000.0 25 0 290700.0 + 11511 GILTDAVALNL 11 87 550.3223278189857 1098.6301027047714 2 550.3231078982353 MULTI CID FTMS 0 0 0 13891 1883988.5 0.5865034429658889 2 -0.2245559692382812 4 Unmodified _GILTDAVALNL_ REV__ENSG00000147262|ENST00000682440|GPR119 19.256988751693697 0.6345794173041263 4 [{I|L}T]AV{[RE]|[WV]}{I|L}Q{[VA]|[{I|L}G]} 10 -1 + 45.29 0.0 0.0 4.1224 4.1224 64.989 0.0 0.0 0.0 0.4081685421208902 7.269987279362624 0.4081685421208902 0.4081685421208902 0 0.0 1.3010299956639813 0.9604093769761876 0.0 [{I|L}T]AV{[RE]|[WV]}{I|L}Q{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}{I|L}T{[RE]|[WV]}{I|L}Q{[VA]|[{I|L}G]};[{I|L}T]G{I|L}{[RE]|[WV]}{I|L}Q{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}T{I|L}{[RE]|[WV]}{I|L}Q{[VA]|[{I|L}G]};[{I|L}T]AV{[RE]|[WV]}{I|L}[AG]{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}{I|L}T{[RE]|[WV]}{I|L}[AG]{[VA]|[{I|L}G]};[{I|L}T]G{I|L}{[RE]|[WV]}{I|L}[AG]{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}PV[R{M(Oxidation (M))|F}]{I|L}Q{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}T{I|L}{[RE]|[WV]}{I|L}[AG]{[VA]|[{I|L}G]};[{I|L}A]VT{[RE]|[WV]}{I|L}Q{[VA]|[{I|L}G]} 4.1224;4.0853;3.8124;3.651;3.2883;3.2511;2.9782;2.8301;2.8168;2.3314 -;-;-;-;-;-;-;-;-;- 628 1 1.039 64584.0 1.0 9052 4841 13891 HBL1_DMSO_200M_050219_2,13895 HBL1_DMSO_200M_050219_2,13895,GILTDAVALNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13896 73.505 33.0 1645300.0 25 0 232960.0 + 30285 QYPGRSLVF 9 79 533.7893368320152 1065.5641207308304 2 533.7886840701103 MULTI CID FTMS 0 0 0 13891 1606290.625 0.4323327533604358 2 -0.2245559692382812 5 Unmodified _QYPGRSLVF_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 24.020572477871973 0.2255576514309169 4 QYP 3 6 47.435 0.0 0.0 4.4516 0.0 0.0 0.0 674.3643282525999 674.3643282525999 29.94386806657971 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 + QYP 4.4516 + + 48 + 1 1.039 50490.9 1.0 9053 4841 13891 HBL1_DMSO_200M_050219_2,13896 HBL1_DMSO_200M_050219_2,13896,QYPGRSLVF False True QYPGRSLVF 73.505233 533.78868407011 144428184.0 13891.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 5.307472229003906 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13897 73.506 17.0 3246000.0 25 0 465360.0 1448 ALELKVEQI 9 97 521.8115954693565 0 521.8141967654228 PEAK CID FTMS 0 0 0 13891 1638538.75 0.6366435554526347 -2 0.2514419555664062 6 Unmodified _ALELKVEQI_ ENSG00000196335|ENST00000355870|STK31;ENST00000476399.5_1_7:23776595-23810746:+|nuORF;nc|ENSG00000196335|Q9BXU1-2|STK31;nc|ENSG00000196335|Q9BXU1-3|STK31 20.453626601364224 0.1969592619112565 4 D{[QV]|[N{I|L}]|[RA]|[KV]}QA{[VA]|[{I|L}G]}D 8 7 15.327 0.0 0.0 1.4715 0.0 0.0 130.13843644476907 82.06691156558827 212.2053480103573 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.2887254899964357 D{[QV]|[N{I|L}]|[RA]|[KV]}QA{[VA]|[{I|L}G]}D 1.4715 - 312 + 1 1.039 47088.5 1.0 9054 4841 13891 HBL1_DMSO_200M_050219_2,13897 HBL1_DMSO_200M_050219_2,13897,ALELKVEQI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13898 73.508 43.0 1288400.0 25 0 267320.0 + -1 MRCRKRKV 8 80 567.3299654973393 1132.6453780614786 2 567.3299438357353 MULTI CID FTMS 0 0 0 13891 1240095.375 0.3275879205433209 4 -0.4056930541992187 7 Carbamidomethyl (C) _MRC(Carbamidomethyl (C))RKRKV_ REV__ENST00000606197.1_1_6:22147303-22147456:+|nuORF 0.7936320650641473 0.8195151834710337 4 D 1 -1 1.42 0.0 0.0 0.12537 0.0 0.0 929.5650233024928 85.03019128970936 1014.595214592202 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.12537 - 2 + 1 1.039 47448.3 1.0 9055 4841 13891 HBL1_DMSO_200M_050219_2,13898 HBL1_DMSO_200M_050219_2,13898,MRCRKRKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13899 73.509 49.0 1244800.0 25 0 226870.0 10952 GALKRQNL 8 70 450.27503394605856 898.5355149589171 2 450.2748901247978 MULTI CID FTMS 0 0 0 13891 1177257.5 0.172664074192059 2 -0.2245559692382812 8 Unmodified _GALKRQNL_ ENSG00000141519|ENST00000397545|CCDC40;ENST00000574799.5_1_17:78022329-78073571:+|nuORF;nc|ENSG00000141519|Q4G0X9-3|CCDC40 2.577480529830294 0.808687252328423 4 V 1 8 10.837 0.0 0.0 1.2061 0.0 0.0 781.4558926218062 0.0 781.4558926218062 0.0 3.8477553931086295 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2061 - 30 + 1 1.039 53518.6 1.0 9056 4841 13891 HBL1_DMSO_200M_050219_2,13899 HBL1_DMSO_200M_050219_2,13899,GALKRQNL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13900 73.511 83.0 721830.0 25 0 150550.0 -1 VPKGKMKI 8 70 458.7880193260251 915.5614857188502 2 458.7878600955009 MULTI CID FTMS 0 0 0 13891 701651.5625 0.193891113656927 2 -0.2245559692382812 9 Oxidation (M) _VPKGKM(Oxidation (M))KI_ ENSG00000132464|ENST00000396073|ENAM 2.889219685676258 0.8067950007271085 4 {I|L} 1 -1 13.099 0.0 0.0 1.4307 0.0 0.0 784.4665893338878 0.0 784.4665893338878 0.0 13.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4307 + + 10 + 1 1.039 51725.4 1.0 9057 4841 13891 HBL1_DMSO_200M_050219_2,13900 HBL1_DMSO_200M_050219_2,13900,VPKGKMKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13901 73.512 43.0 829010.0 25 0 99351.0 -1 MIIRCAKVI 9 78 560.3218664409794 1118.6291799487587 2 560.8215820193291 MULTI CID FTMS 0 0 0 13891 703242.25 0.8103781400608424 6 -0.6518096923828125 10 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))IIRC(Carbamidomethyl (C))AKVI_ ENSG00000259417|ENST00000560778|CTXND1 5.230669730166228 0.7320841359114558 4 V 1 -1 11.259 0.0 0.0 1.0065 0.0 0.0 1001.5495652410424 0.0 1001.5495652410424 0.0 3.5509378576803705 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0065 + + 36 + 1 1.039 35259.0 1.0 9058 4841 13891 HBL1_DMSO_200M_050219_2,13901 HBL1_DMSO_200M_050219_2,13901,MIIRCAKVI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13902 73.514 77.0 550430.0 25 0 20008.0 + -1 PVQCRARFLVL 11 84 679.8873001661174 1357.7600473990346 2 679.8882934451103 MULTI CID FTMS 0 0 0 13891 667940.9375 0.1195694577385733 3 -0.3451385498046875 11 Carbamidomethyl (C) _PVQC(Carbamidomethyl (C))RARFLVL_ REV__ENST00000409109.5_1_11:119039567-119039948:+|nuORF;REV__ENST00000474751.6_1_11:119039567-119042159:+|nuORF 12.240655878213236 0.7805268987462184 4 VPY[R{I|L}]Q{I|L}VE 9 -1 79.645 0.0 0.0 5.8659 0.0 0.0 0.0 257.09421716861567 257.09421716861567 44.36892734507973 0.0 0.0 0.0 0 2.1307196863200843 1.6989700043360187 0.0 0.0 VPY[R{I|L}]Q{I|L}VE 5.8659 - 1506 + 1 1.039 38545.7 1.0 9059 4841 13891 HBL1_DMSO_200M_050219_2,13902 HBL1_DMSO_200M_050219_2,13902,PVQCRARFLVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13903 73.517 172.0 823010.0 25 0 125270.0 + 34217 SLPKKLALL 9 107 491.8369000279274 981.6592471226548 2 491.8369323611259 MULTI CID FTMS 0 0 0 13891 602614.0625 1.0 0 0.0 12 Unmodified _SLPKKLALL_ ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF 25.399314129420983 0.2080152500878129 4 {I|L}SPK 4 7 49.909 0.0 0.0 5.0842 0.0 0.0 0.0 553.3722195152792 553.3722195152792 20.211892990699383 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}SPK 5.0842 - 364 + 1 1.039 109569.8 1.0 9060 4841 13891 HBL1_DMSO_200M_050219_2,13903 HBL1_DMSO_200M_050219_2,13903,SLPKKLALL False True SLPKKLALL 73.517133 491.836932361126 5830452.5 13891.0 ENST00000588858.5_1_19:13886394-13889009:+|nuORF;;ENSG00000104979|ENST00000588234|C19orf53 1.938655177752177 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13904 73.519 82.0 677810.0 25 0 88024.0 20911 LMWIIKHF 8 80 544.3091277453768 1086.6037025575536 2 544.3104736208916 MULTI CID FTMS 0 0 0 13891 480476.0625 0.369503493875732 7 -0.7221832275390625 13 Unmodified _LMWIIKHF_ ENST00000518667.1_1_8:66643803-66660021:-|nuORF 6.354104778181461 0.7857632046190106 4 S{M(Oxidation (M))|F} 2 7 13.188 0.0 0.0 1.2137 0.0 0.0 834.4920582404765 0.0 834.4920582404765 0.0 1.767604344418121 0.0 0.0 0 0.0 0.0 0.0 0.0 S{M(Oxidation (M))|F} 1.2137 - 15 + 1 1.039 50820.7 1.0 9061 4841 13891 HBL1_DMSO_200M_050219_2,13904 HBL1_DMSO_200M_050219_2,13904,LMWIIKHF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13905 73.522 136.0 607140.0 25 0 60257.0 + 42611 VTSPRRCI 8 116 466.2616498030667 0 466.2587768435478 PEAK CID FTMS 0 0 0 13891 439903.46875 1.0 0 0.0 14 Unmodified _VTSPRRCI_ REV__ENST00000477592.2_1_6:3723202-3723334:-|nuORF 13.50788311687929 0.5021269579892848 4 NPSD 4 -1 11.148 0.0 0.0 1.1981 0.0 0.0 432.2651686473459 82.06692682437733 514.3320954717233 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1595680409956017 0.0 NPSD 1.1981 - 254 + 1 1.039 68340.4 1.0 9062 4841 13891 HBL1_DMSO_200M_050219_2,13905 HBL1_DMSO_200M_050219_2,13905,VTSPRRCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13906 73.524 109.0 581270.0 25 0 41303.0 + 35006 SQPDLLHQL 9 96 525.7834930173728 1049.5524331015456 2 525.7832519412041 MULTI CID FTMS 0 0 0 13891 429076.25 0.4922159950947748 3 -0.3451385498046875 15 Unmodified _SQPDLLHQL_ ENSG00000012817|ENST00000317961|KDM5D;ENSG00000073614|ENST00000399788|KDM5A;ENSG00000117139|ENST00000367265|KDM5B;ENSG00000126012|ENST00000375401|KDM5C;ENST00000465402.1_1_X:53230656-53239709:-|nuORF;ENST00000492117.1_1_Y:21877982-21883284:-|nuORF;ENST00000497100.5_1_X:53227940-53240837:-|nuORF;ENST00000544777.1_1_12:442481-443474:-|nuORF;nc|ENSG00000012817|Q9BY66-2|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D;nc|ENSG00000073614|P29375-2|KDM5A;nc|ENSG00000117139|Q9UGL1-2|KDM5B;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C 39.94969957227396 0.0757326808254658 4 {[QS]|[NT]}PD{I|L}{I|L}HQ{I|L} 9 0 + 49.012 0.0 0.0 4.6698 4.6698 83.147 0.0 0.0 0.0 32.690322953457525 17.36371556024956 17.36371556024956 15.62977812912628 0 0.5 0.9208187539523752 0.0 0.6421590589602533 + + {[QS]|[NT]}PD{I|L}{I|L}HQ{I|L};{[QS]|[NT]}PD{I|L}{I|L}H[AG]{I|L};{[QS]|[NT]}PD{I|L}{I|L}HAAV;{NN|[MP]|[D{I|L}]|[EV]}P[H{I|L}]Q[KA]E;[DP]{I|L}[H{I|L}]Q[KA]E;[VP]E[H{I|L}]Q[KA]E;[{I|L}P]D[H{I|L}]Q[KA]E 4.6698;3.1806;2.622;1.4905;0.97501;0.84036;0.73893 +;-;-;-;-;-;- + 178 + 1 1.039 54309.7 1.0 9063 4841 13891 HBL1_DMSO_200M_050219_2,13906 HBL1_DMSO_200M_050219_2,13906,SQPDLLHQL True True SQPDLLHQL 73.524062 525.783251941204 18256680.0 13891.0 ENST00000544777.1_1_12:442481-443474:-|nuORF;;nc|ENSG00000126012|P41229-2|KDM5C;;ENSG00000117139|ENST00000367265|KDM5B;;ENSG00000012817|ENST00000317961|KDM5D;;ENST00000465402.1_1_X:53230656-53239709:-|nuORF;;nc|ENSG00000117139|Q9UGL1-2|KDM5B;;nc|ENSG00000126012|P41229-3|KDM5C;;ENST00000492117.1_1_Y:21877982-21883284:-|nuORF;;nc|ENSG00000126012|P41229-4|KDM5C;;ENST00000497100.5_1_X:53227940-53240837:-|nuORF;;ENSG00000073614|ENST00000399788|KDM5A;;nc|ENSG00000126012|P41229-5|KDM5C;;nc|ENSG00000012817|Q9BY66-2|KDM5D;;nc|ENSG00000012817|Q9BY66-3|KDM5D;;ENSG00000126012|ENST00000375401|KDM5C;;nc|ENSG00000073614|P29375-2|KDM5A 7.236185232798259 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13907 73.534 588.0 218140.0 25 0 18828.0 16276 IVVEEKVRVP 10 187 584.3569326533695 1166.699312373539 2 584.3567993044853 MULTI CID FTMS 0 0 0 13891 309495.65625 0.3750267812412788 3 -0.3451385498046875 16 Unmodified _IVVEEKVRVP_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 6.2057823575117 0.6979311171683138 4 [{I|L}V]N 3 8 16.171 0.0 0.0 1.386 0.0 0.0 0.0 837.4822768112921 837.4822768112921 -0.5845516199980949 0.0 -0.5845516199980949 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}V]N 1.386 - 912 1 1.039 100306.3 1.0 9064 4841 13891 HBL1_DMSO_200M_050219_2,13907 HBL1_DMSO_200M_050219_2,13907,IVVEEKVRVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13908 73.547 706.0 268430.0 25 0 29676.0 + 44850 YPPGAFVSV 9 198 468.74545106016245 0 468.7451965212822 PEAK CID FTMS 0 0 0 13891 279761.25 0.5829258431850589 2 -0.2245559692382812 17 Unmodified _YPPGAFVSV_ ENSG00000137055|ENST00000397292|PLAA 34.18733598223924 0.0902931971803067 4 YPVWD 5 6 19.346 0.0 0.0 2.068 0.0 0.0 204.11033450029865 68.05134760074452 272.16168210104314 0.0 0.0 0.0 0.0 0 0.5 0.0 0.1694451763165201 0.0 YPVWD 2.068 - 306 + 1 1.039 148744.5 1.0 9065 4841 13891 HBL1_DMSO_200M_050219_2,13908 HBL1_DMSO_200M_050219_2,13908,YPPGAFVSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13909 73.557 608.0 302020.0 25 0 46331.0 -1 0 123 629.3834627022006 628.3761862356006 1 629.3835937380791 MULTI CID FTMS 0 0 0 13891 268631.09375 0.8977895618978231 1 -0.07464599609375 18 4 V 1 -1 12.218 0.0 0.0 1.9445 0.0 0.0 511.2968767036654 0.0 511.2968767036654 0.0 -0.0877392430750489 -0.0877392430750489 0.0 0 0.0 0.0 0.0 0.0 V 1.9445 - 88 + 1 1.039 138375.4 1.0 9066 4841 13891 HBL1_DMSO_200M_050219_2,13909 HBL1_DMSO_200M_050219_2,13909, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13910 73.568 633.0 389220.0 25 0 51944.0 + 33314 SFVGSIIGFSL 11 206 563.8116135804587 1125.6086742277173 2 563.8110839724541 MULTI CID FTMS 0 0 0 13891 269225.6875 1.0 0 0.0 19 Unmodified _SFVGSIIGFSL_ REV__ENSG00000117362|ENST00000369109|APH1A;REV__ENST00000461320.5_1_1:150239547-150241394:-|nuORF;REV__nc|ENSG00000117362|Q96BI3-2|APH1A;REV__nc|ENSG00000117362|Q96BI3-3|APH1A 38.17557092003332 0.2405003631267018 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VEKV{I|L}AYA 10 -1 + 56.378 0.0 0.0 5.0087 5.0087 73.486 0.0 0.0 0.0 3.467626665604776 8.008181446299844 3.467626665604776 3.0102999566398125 0 0.5738194166937225 1.3979400086720375 0.8243923658886187 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VEKV{I|L}AYA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VEK{I|L}VAYA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VEKVA{I|L}YA;[Y{I|L}]DAKV{I|L}AYA;[Y{I|L}]DKAV{I|L}AYA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VEK{I|L}G{I|L}YA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}DKV{I|L}AYA;{[VA]|[{I|L}G]}YEKV{I|L}AYA;[Y{I|L}]DAKVA{I|L}YA;[Y{I|L}]DKA{I|L}VAYA 5.0087;4.7412;4.7412;4.7006;4.7006;4.4738;4.4714;4.4428;4.4332;4.4332 -;-;-;-;-;-;-;-;-;- 8885 1 1.039 186559.6 1.0 9067 4841 13891 HBL1_DMSO_200M_050219_2,13910 HBL1_DMSO_200M_050219_2,13910,SFVGSIIGFSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13911 73.571 114.0 727540.0 25 0 43679.0 + 36190 SVLGQAMEKV 10 109 530.810363164803 1059.606173396406 2 530.8106567263603 MULTI CID FTMS 0 0 0 13891 244224.53125 1.0 0 0.0 20 Unmodified _SVVSLTRWL_ ENSG00000001630|ENST00000003100|CYP51A1 7.289230182591677 0.6602208344931196 4 {I|L} 1 8 11.783 0.0 0.0 1.112 0.0 0.0 928.5112464938652 0.0 928.5112464938652 0.0 1.0693990997254057 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.112 + + 360 + 1 1.039 71834.3 1.0 9068 4841 13891 HBL1_DMSO_200M_050219_2,13911 HBL1_DMSO_200M_050219_2,13911,SVVSLTRWL False False SVLGQAMEKV 73.570679 530.81065672636 2341830.5 13891.0 ENSG00000001630|ENST00000003100|CYP51A1 4.107848882675171 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13913 73.575 6.1 7117100.0 25 0 617550.0 1099 AGNSELSLQL 10 73 516.2740905813038 1030.5336282294074 2 516.2745239138603 MULTI CID FTMS 0 0 0 13912 6684586.0 0.8268021708457188 1 -0.1499099731445312 1 Unmodified _AGNSELSLQL_ ENSG00000115234|ENST00000233575|SNX17;ENST00000440760.5_1_2:27594325-27599583:+|nuORF;nc|ENSG00000115234|Q15036-2|SNX17 24.020572477871973 0.4289996903560794 4 [DP]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}Q{I|L} 9 5 [DP]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L} + + 22.563 4.9654 0.6437 2.1894 2.1894 44.739 0.0 0.0 0.0 0.0 9.3753063169585 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 [DP]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}Q{I|L} 2.1894 - 163 + 1 1.056 39534.3 1.0 9069 4842 13912 HBL1_DMSO_200M_050219_2,13913 HBL1_DMSO_200M_050219_2,13913,AGNSELSLQL False True IPYSPDVQI 73.575166 516.27452391386 171823888.0 13912.0 ENSG00000127463|ENST00000477853|EMC1;;ENST00000461353.1_1_1:19545799-19546215:-|nuORF;;nc|ENSG00000127463|Q8N766-4|EMC1;;nc|ENSG00000127463|Q8N766-2|EMC1;;nc|ENSG00000127463|Q8N766-3|EMC1 1.882950872182846 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13914 73.576 15.0 4246000.0 25 0 475050.0 + 41998 VQPLQLGGLN 10 97 519.8005727838432 1037.5865926344864 2 519.8010131716728 MULTI CID FTMS 0 0 0 13912 2038646.0 0.8019709330451401 1 -0.1499099731445312 2 Unmodified _VQPLQLGGLN_ REV__nc|ENSG00000185379|O75771-8|RAD51D 34.40172386719151 0.2166836008404837 4 [AG]PV{I|L}QND 8 -1 32.777 0.0 0.0 3.159 0.0 0.0 0.0 240.1693922773176 240.1693922773176 2.538821615300648 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.3494850021680094 [AG]PV{I|L}QND 3.159 - 750 1 1.056 54150.3 1.0 9070 4842 13912 HBL1_DMSO_200M_050219_2,13914 HBL1_DMSO_200M_050219_2,13914,VQPLQLGGLN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13915 73.578 72.0 934590.0 25 0 90352.0 + 38261 TPVRLPSI 8 84 441.7741559145741 881.5337588959483 2 441.7740051150322 MULTI CID FTMS 0 0 0 13912 731744.125 0.8134091872901501 1 -0.1499099731445312 3 Unmodified _TPVRLPSI_ ENSG00000125347|ENST00000245414|IRF1;ENST00000472045.1_1_5:131819645-131819816:-|nuORF 63.960520009940105 0.1161527639280749 4 TPVR{I|L}PS{I|L} 8 0 + 81.293 0.0 0.0 9.2218 9.2218 97.684 0.0 0.0 0.0 53.21070360742688 14.904630595263413 14.904630595263413 24.772437815030628 0 1.8182503180159344 1.6989700043360187 1.0994850021680094 0.0 + + TPVR{I|L}PS{I|L};[TP]VR{I|L}T[VP];[TP]VR{I|L}PVT;[TP]VR{I|L}PS{I|L};[TP]VR[VP]{I|L}T;[TP]VR[VP]T{I|L};[PS]{I|L}R{I|L}T[VP];[VP]TR{I|L}T[VP];[PS]{I|L}R{I|L}PVT;[VP]TR{I|L}PVT 9.2218;6.4116;6.207;5.7555;5.4719;5.0205;4.4988;4.3889;4.2942;4.1842 +;-;-;+;-;-;-;-;-;- + 362 + 1 1.056 57788.9 1.0 9071 4842 13912 HBL1_DMSO_200M_050219_2,13915 HBL1_DMSO_200M_050219_2,13915,TPVRLPSI True True TPVRLPSI 73.578028 441.774005115032 52089390.0 13912.0 ENSG00000125347|ENST00000245414|IRF1;;ENST00000472045.1_1_5:131819645-131819816:-|nuORF 6.1170047124226885 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13916 73.58 94.0 589420.0 25 0 50103.0 + 16950 KILQELPSV 9 84 513.8135928197042 1025.6126327062084 2 513.8137695193291 MULTI CID FTMS 0 0 0 13912 395197.34375 0.2918506553898715 3 -0.3310470581054687 4 Unmodified _KILQELPSV_ ENSG00000163166|ENST00000295321|IWS1;nc|ENSG00000163166|Q96ST2-2|IWS1;nc|ENSG00000163166|Q96ST2-3|IWS1 47.74868867922204 0.0453060283459952 4 [PS]VS{I|L}K{I|L}PSV 10 6 + 78.409 0.0 0.0 7.6451 7.6451 94.458 0.0 0.0 0.0 17.86970404277504 20.35712105478538 17.86970404277504 17.86970404277504 0 1.5924778212679485 1.154901959985743 0.5044321917401079 0.3494850021680094 [PS]VS{I|L}K{I|L}PSV;[VS]PS{I|L}K{I|L}PSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}K{I|L}PSV;[VG][DV]{I|L}K{I|L}PSV;[Q{I|L}]E{I|L}K{I|L}PSV;[DG]VV{I|L}K{I|L}PSV 7.6451;5.9027;5.8528;5.7876;5.6365;3.9944 -;-;-;-;-;- 254 1 1.056 52346.9 1.0 9072 4842 13912 HBL1_DMSO_200M_050219_2,13916 HBL1_DMSO_200M_050219_2,13916,KILQELPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13917 73.582 76.0 1017900.0 25 0 84867.0 + 31654 IPYIIHTV 8 111 478.29696739915056 954.5793818651013 2 478.2980529665947 MULTI CID FTMS 0 0 0 13912 334880.28125 0.6135495318924499 -1 0.07464599609375 5 Unmodified _RRGGARVAL_ nc|ENSG00000127481|Q5T4S7-2|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 7.910154910731844 0.6385446671287552 4 [VS][PA]{I|L}VAW 8 6 34.174 0.0 0.0 3.58 0.0 0.0 0.0 128.09784544009213 128.09784544009213 13.8213735862018 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [VS][PA]{I|L}VAW 3.58 - 512 1 1.056 62792.0 1.0 9073 4842 13912 HBL1_DMSO_200M_050219_2,13917 HBL1_DMSO_200M_050219_2,13917,RRGGARVAL False False IPYIIHTV 73.581845 478.298052966595 461353.5625 13912.0 nc|ENSG00000127481|Q5T4S7-2|UBR4;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4 2.861969470977783 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13918 73.593 612.0 369260.0 25 0 16936.0 + 26275 NQQLPIESQMV 11 165 643.8247920412803 1285.6350311493604 2 643.8239013552666 MULTI CID FTMS 0 0 0 13912 305668.5 0.4878602432430248 1 -0.1499099731445312 6 Unmodified _NQQLPIESQMV_ ENSG00000144028|ENST00000323853|SNRNP200 93.16586880292088 0.000550602871346 4 [AG]NQ{I|L}P{I|L}ESQ{[ET]|[MV]} 12 3 + 91.182 0.0 0.0 7.0923 7.0923 86.115 0.0 0.0 0.0 6.197887582883936 7.447274948966935 6.197887582883936 6.197887582883936 0 0.9247425010840048 1.6989700043360187 0.0 2.329689690656103 [AG]NQ{I|L}P{I|L}ESQ{[ET]|[MV]};{[QN]|[E{I|L}]|[KN]}Q{I|L}P{I|L}ESQ{[ET]|[MV]};[AG]N[AG]{I|L}P{I|L}ESQ{[ET]|[MV]};[AG]NQ{I|L}P{I|L}ES[AG]{[ET]|[MV]};[AG]GGQ{I|L}P{I|L}ESQ{[ET]|[MV]};[AG]NQ{I|L}PE{I|L}SQ{[ET]|[MV]};{[QN]|[E{I|L}]|[KN]}Q{I|L}P{I|L}ES[AG]{[ET]|[MV]};{[QN]|[E{I|L}]|[KN]}[AG]{I|L}P{I|L}ESQ{[ET]|[MV]};[AG]NQ{I|L}EP{I|L}SQ{[ET]|[MV]};[AG]N[AG]{I|L}P{I|L}ES[AG]{[ET]|[MV]} 7.0923;6.6103;6.3847;6.3847;6.1519;6.1368;5.9002;5.9002;5.8055;5.679 -;+;-;-;-;-;-;-;-;- + 18059 1 1.056 167146.6 1.0 9074 4842 13912 HBL1_DMSO_200M_050219_2,13918 HBL1_DMSO_200M_050219_2,13918,NQQLPIESQMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13919 73.596 191.0 256130.0 25 0 47667.0 + 32946 SELKSKKSTLG 11 85 589.3429844827069 1176.6714160322138 2 589.3433105349541 MULTI CID FTMS 0 0 0 13912 290305.71875 0.2749917056538431 10 -1.0207061767578125 7 Unmodified _SELKSKKSTLG_ REV__ENSG00000116731|ENST00000311066|PRDM2;REV__nc|ENSG00000116731|Q13029-2|PRDM2;REV__nc|ENSG00000116731|Q13029-3|PRDM2;REV__nc|ENSG00000116731|Q13029-5|PRDM2 2.735195868890462 0.8622431031272658 4 V 1 -1 9.2082 0.0 0.0 0.78256 0.0 0.0 1059.5920607239111 0.0 1059.5920607239111 0.0 0.532276654571433 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.78256 - 17 + 1 1.056 39618.4 1.0 9075 4842 13912 HBL1_DMSO_200M_050219_2,13919 HBL1_DMSO_200M_050219_2,13919,SELKSKKSTLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13920 73.609 746.0 571290.0 25 0 97374.0 + -1 YPYSPPTF 8 128 970.9495336942258 1939.8845144552515 2 971.4525634646416 MULTI CID FTMS 0 0 0 13912 243365.109375 0.4381000211520676 -2 0.1461181640625 8 ENSG00000107341|ENST00000263228|UBE2R2 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}SC(Carbamidomethyl (C))[DG]E{I|L}PP{I|L} 13 -1 71.055 0.0 0.0 3.6629 0.0 0.0 0.0 508.2238448598016 508.2238448598016 32.131961688534915 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 1.385151878060192 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}SC(Carbamidomethyl (C))[DG]E{I|L}PP{I|L} 3.6629 - 11306 1 1.056 272805.6 1.0 9076 4842 13912 HBL1_DMSO_200M_050219_2,13920 HBL1_DMSO_200M_050219_2,13920, False False YPYSPPTF 73.609182 971.452563464642 12631500.0 13912.0 ENSG00000107341|ENST00000263228|UBE2R2 8.448209762573242 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13921 73.611 92.0 915010.0 25 0 63457.0 + + 6425 EAAEVILRV 9 96 500.2929639140957 998.5713748949914 2 500.2956420779228 MULTI CID FTMS 0 0 0 13912 250320.609375 0.0730598957544765 -3 0.3260879516601562 9 Unmodified _EAARGARRI_ nc|ENSG00000166226|P78371-2|CCT2;ENST00000550653.1_1_12:69993626-69995102:+|nuORF;ENSG00000166226|ENST00000299300|CCT2 34.10243960390752 0.1078313939113124 4 {[CP]|[EA]}AEV{I|L}{I|L}RV 9 -1 + 64.2 0.0 0.0 6.4292 6.4292 78.922 0.0 0.0 0.0 3.010299956639805 9.140760554693756 3.010299956639805 3.010299956639805 0 0.6747425010840047 0.0 0.4247425010840047 0.5994850021680094 {[CP]|[EA]}AEV{I|L}{I|L}RV;[PS]SEV{I|L}{I|L}RV;{[CP]|[EA]}AEV{I|L}VR{I|L};[PS]SEV{I|L}VR{I|L};{[CP]|[EA]}AEVV{I|L}R{I|L};[PS]SEVV{I|L}R{I|L};{[CP]|[EA]}V{[CP]|[EA]}{I|L}{I|L}RV;{[CP]|[EA]}[W{I|L}]{I|L}{I|L}RV;[PS][WE]{I|L}{I|L}RV;{[CP]|[EA]}V{[CP]|[EA]}{I|L}VR{I|L} 6.4292;6.1278;5.5138;5.2124;4.7103;4.4088;3.2741;3.1031;2.8017;2.3587 -;-;-;-;-;-;-;-;-;- 219 + 1 1.056 71903.8 1.0 9077 4842 13912 HBL1_DMSO_200M_050219_2,13921 HBL1_DMSO_200M_050219_2,13921,EAARGARRI False False EAAEVILRV 73.611199 500.295642077923 20512078.0 13912.0 nc|ENSG00000166226|P78371-2|CCT2;;ENST00000550653.1_1_12:69993626-69995102:+|nuORF;;ENSG00000166226|ENST00000299300|CCT2 5.069191773732503 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13922 73.617 332.0 772960.0 25 0 65469.0 + 35944 SVPGHLLPL 9 191 466.7820194832304 931.5494860332608 2 466.7819091677666 MULTI CID FTMS 0 0 0 13912 197776.140625 0.0117793489549242 10 -1.0207061767578125 10 Unmodified _SVPGHLLPL_ REV__ENST00000377242.7_1_10:20105398-20106118:+|nuORF 15.847184025352805 0.4077185912009129 4 {[TV]|[{I|L}S]}QTSPV 7 -1 33.255 0.0 0.0 3.5698 0.0 0.0 0.0 216.1432109690608 216.1432109690608 8.032847255646782 0.0 0.0 0.0 0 0.0 1.154901959985743 1.4802046884880935 0.2614393726401688 {[TV]|[{I|L}S]}QTSPV 3.5698 - 3802 1 1.056 195412.0 1.0 9078 4842 13912 HBL1_DMSO_200M_050219_2,13922 HBL1_DMSO_200M_050219_2,13922,SVPGHLLPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13923 73.631 800.0 174490.0 25 0 7844.5 -1 0 130 963.7848839524823 2888.332822457647 3 964.1201049685478 MULTI CID FTMS 0 0 0 13912 199506.671875 0.7787841480518697 1 -0.1499099731445312 11 4 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 6 -1 45.168 0.0 0.0 1.5638 0.0 0.0 0.0 2168.018649444228 2168.018649444228 15.36828650810687 0.0 0.0 0.0 0 1.424742501084005 2.0 0.4247425010840047 0.6549471895720985 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 1.5638 - 2863 1 1.056 98066.6 0.9900000095367432 9079 4842 13912 HBL1_DMSO_200M_050219_2,13923 HBL1_DMSO_200M_050219_2,13923, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13924 73.636 196.0 748070.0 25 0 99530.0 + 24418 MGAAVRII 8 127 415.7493244726917 829.4840960121834 2 415.7495605349541 MULTI CID FTMS 0 0 0 13912 175945.890625 0.1425298262980962 -2 0.1461181640625 12 Unmodified _MGAAVRII_ REV__ENSG00000170209|ENST00000303941|ANKK1 46.92087301778293 0.1537303740847981 4 MGAVA{I|L}R{I|L} 8 -1 + 80.182 0.0 0.0 9.6665 9.6665 85.755 0.0 0.0 0.0 40.93794511628936 15.400990676322904 15.400990676322904 3.0102999566398125 0 1.3494850021680094 1.3010299956639813 0.0 0.7302046884880937 MGAVA{I|L}R{I|L};MGA{I|L}G{I|L}R{I|L};MG{I|L}GA{I|L}R{I|L};MG{I|L}AG{I|L}R{I|L};MGAV{I|L}AR{I|L};MGA{I|L}VAR{I|L};MG{I|L}Q{I|L}R{I|L};MG{I|L}G{I|L}AR{I|L};MG{I|L}AVAR{I|L};MQVA{I|L}R{I|L} 9.6665;9.3036;9.2129;8.85;8.8446;8.4817;8.4402;8.391;8.0281;7.7907 -;-;-;-;-;-;-;-;-;- 417 + 1 1.056 122183.7 1.0 9080 4842 13912 HBL1_DMSO_200M_050219_2,13924 HBL1_DMSO_200M_050219_2,13924,MGAAVRII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13925 73.65 800.0 275550.0 25 0 18128.0 + 9120 FFPDKPITQY 10 193 628.3219702761631 0 628.3215820193291 PEAK CID FTMS 0 0 0 13912 149961.859375 0.7720745392659936 -1 0.07464599609375 13 Unmodified _FFPDKPITQY_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 15.248480904072842 0.3349989633518451 4 PDK 3 7 16.599 0.0 0.0 1.323 0.0 0.0 294.13767070230386 617.2944054721346 911.4320761744384 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.4247425010840047 + PDK 1.323 + + 212 + 1 1.056 164174.9 0.8500000238418579 9081 4842 13912 HBL1_DMSO_200M_050219_2,13925 HBL1_DMSO_200M_050219_2,13925,FFPDKPITQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13926 73.652 80.0 326250.0 25 0 28615.0 27652 PLGTQLSV 8 66 407.7373624372332 813.4601719412664 2 407.7374145388603 MULTI CID FTMS 0 0 0 13912 143775.953125 0.2157817802554226 1 -0.1499099731445312 14 Unmodified _PLGTQLSV_ ENSG00000111665|ENST00000538862|CDCA3;ENST00000535871.1_1_12:6958551-6959649:-|nuORF;ENST00000536241.1_1_12:6958687-6959760:-|nuORF;ENST00000544610.1_1_12:6958209-6958939:-|nuORF;ENST00000545368.5_1_12:6958360-6960430:-|nuORF 10.183394434864962 0.7604730176254005 4 TGV 3 6 21.427 0.0 0.0 2.634 0.0 0.0 538.3115646188039 0.0 538.3115646188039 0.0 7.659389507179341 0.0 0.0 0 0.0 0.0 0.0 0.0 TGV 2.634 - 37 + 1 1.056 27940.1 1.0 9082 4842 13912 HBL1_DMSO_200M_050219_2,13926 HBL1_DMSO_200M_050219_2,13926,PLGTQLSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13927 73.665 800.0 252960.0 25 0 31908.0 + 41697 VPSDPFTGV 9 125 918.4592040054774 917.4519275388774 1 918.4523193240166 MULTI CID FTMS 0 0 0 13912 117404.96875 0.1419066938008421 -5 0.4957733154296875 15 Unmodified _VPSDPFTGV_ ENSG00000185019|ENST00000217173|UBOX5;nc|ENSG00000185019|O94941-2|UBOX5 92.4914307365334 0.0139747738690111 4 [VP]SDP{M(Oxidation (M))|F}TGV 9 0 + 66.434 0.0 0.0 7.2411 7.2411 84.677 0.0 0.0 0.0 4.7184874961635614 4.321355998091434 4.321355998091434 4.7184874961635614 0 1.5451140161145327 1.5228787452803376 0.5866968715561641 0.0 + + [VP]SDP{M(Oxidation (M))|F}TGV;VPSDP{M(Oxidation (M))|F}GTV;VPSDP{M(Oxidation (M))|F}TR;VPSDPE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]PEP[HS]GV;[VP]PEPD[HK];[VP]SK{[QC]|[C(Carbamidomethyl (C))A]}TGV;[VP]P[WY]TGV;[VP]M{[ES]|[DT]|[{I|L}C]}VTGV;[VP]SQ[KC]TGV 7.2411;6.7268;6.6741;5.8505;5.3741;5.3347;5.0474;4.8772;4.8713;4.842 +;-;-;-;-;-;-;-;-;- + 2795 1 1.056 133434.6 0.6499999761581421 9083 4842 13912 HBL1_DMSO_200M_050219_2,13927 HBL1_DMSO_200M_050219_2,13927,VPSDPFTGV True True VPSDPFTGV 73.66548 918.452319324017 7277067.5 13912.0 ENSG00000185019|ENST00000217173|UBOX5;;nc|ENSG00000185019|O94941-2|UBOX5 6.433572451273601 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13928 73.669 99.0 751150.0 25 0 127190.0 + 9583 FLKDKFVEI 9 93 380.2219187803197 1137.643926941159 3 380.2209655642509 MULTI CID FTMS 0 0 0 13912 125406.7265625 0.1164136687867624 -2 0.1461181640625 16 Unmodified _FLKDKFVEI_ ENSG00000197943|ENST00000564138|PLCG2;ENST00000567980.5_1_16:81819579-81955027:+|nuORF;ENST00000569929.5_1_16:81888133-81917132:+|nuORF 34.93206674587334 0.1032771302489716 4 {M(Oxidation (M))|F}[RD]DK{I|L}{M(Oxidation (M))|F}{I|L} 8 5 19.162 0.0 0.0 1.6843 0.0 0.0 85.08980757881015 0.0 85.08980757881015 0.0 3.677222137369189 0.0 0.0 0 0.2742275032520141 0.0 0.3054621874040891 0.0 {M(Oxidation (M))|F}[RD]DK{I|L}{M(Oxidation (M))|F}{I|L} 1.6843 - 105 1 1.056 66766.8 1.0 9084 4842 13912 HBL1_DMSO_200M_050219_2,13928 HBL1_DMSO_200M_050219_2,13928,FLKDKFVEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13929 73.683 800.0 100310.0 25 0 4386.1 -1 0 100 864.9376938054527 1727.8608346777053 2 864.9478637576103 MULTI CID FTMS 0 0 0 13912 108044.1484375 0.203226999971668 6 -0.6475372314453125 17 4 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ{I|L}[KC]M{I|L}Q 15 -1 + 92.59 0.0 0.0 5.3587 5.3587 73.551 0.0 0.0 0.0 17.74227503252014 12.525749891599531 12.525749891599531 2.2577249674798594 0 1.5044321917401078 2.0 0.8494850021680094 0.6989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ{I|L}[KC]M{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}P[EP]DEAQ{I|L}[KC]M{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAE[KS]QM{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}P[EP]DEAE[KS]QM{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEA{[NV]|[RG]}MQM{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}P[EP]DEA{[NV]|[RG]}MQM{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ{I|L}[KC]M{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]AQAED[YQ][Q{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]AQAED[YK][Q{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]AQAE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}M[Q{I|L}] 5.3587;5.228;4.9294;4.7988;4.7412;4.6105;4.3754;4.3318;4.3318;4.2019 -;-;-;-;-;-;-;-;-;- 2148 + 1 1.056 59633.3 0.7300000190734863 9085 4842 13912 HBL1_DMSO_200M_050219_2,13929 HBL1_DMSO_200M_050219_2,13929, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13930 73.692 516.0 257220.0 25 0 18483.0 + + 36083 SQVLQVPAV 9 165 470.2735950578147 938.5326371824294 2 470.7759887576103 MULTI CID FTMS 0 0 0 13912 106052.234375 0.3535253083098469 10 -1.0207061767578125 18 Unmodified _SVQIVHRT_ nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;ENSG00000158987|ENST00000509018|RAPGEF6;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6 20.453626601364224 0.6087503291685402 4 [VS]Q{I|L}QV 6 -1 22.718 0.0 0.0 2.4206 0.0 0.0 0.0 281.1430247158857 281.1430247158857 2.874788488859817 0.0 0.0 0.0 0 0.0 0.5528419686577808 0.6861818737241735 0.3494850021680094 [VS]Q{I|L}QV 2.4206 - 2095 1 1.056 104775.9 1.0 9086 4842 13912 HBL1_DMSO_200M_050219_2,13930 HBL1_DMSO_200M_050219_2,13930,SVQIVHRT False False SQVLQVPAV 73.691716 470.77598875761 9812172.0 13912.0 nc|ENSG00000158987|Q8TEU7-5|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-4|RAPGEF6;;ENSG00000158987|ENST00000509018|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-3|RAPGEF6;;nc|ENSG00000158987|Q8TEU7-2|RAPGEF6 5.327248732248942 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13931 73.706 800.0 179710.0 25 0 28697.0 -1 ITVTMKVFKR 10 141 619.8691645460639 1237.7237761589276 2 619.8687011599541 MULTI CID FTMS 0 0 0 13912 100087.828125 0.2227089744649714 -4 0.3599853515625 19 Oxidation (M) _ITVTM(Oxidation (M))KVFKR_ ENSG00000147251|ENST00000276202|DOCK11 3.5964929083625545 0.7100006075494749 4 {I|L} 1 -1 9.9148 0.0 0.0 0.80105 0.0 0.0 1106.6287729624416 0.0 1106.6287729624416 0.0 0.081952080940848 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80105 + + 101 + 1 1.056 107556.2 0.7300000190734863 9087 4842 13912 HBL1_DMSO_200M_050219_2,13931 HBL1_DMSO_200M_050219_2,13931,ITVTMKVFKR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13932 73.721 800.0 183430.0 25 0 13662.0 -1 0 160 625.3192910805553 624.3120146139553 1 625.3188354372978 MULTI CID FTMS 0 0 0 13912 109934.25 0.0103385822987705 15 -1.500885009765625 20 4 V{I|L}AE 4 -1 42.384 0.0 0.0 6.7888 0.0 0.0 0.0 209.05686365299064 209.05686365299064 20.523983474627087 0.0 0.0 0.0 0 0.25 1.3979400086720375 0.3252574989159953 0.0 V{I|L}AE 6.7888 - 433 + 1 1.056 114995.3 0.7300000190734863 9088 4842 13912 HBL1_DMSO_200M_050219_2,13932 HBL1_DMSO_200M_050219_2,13932, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13934 73.725 9.9 3345600.0 25 0 458510.0 + 18372 KVPEWVDTV 9 56 536.7876595663572 1071.5607661995143 2 536.7880737185478 MULTI CID FTMS 0 0 0 13933 4444698.5 0.026049120522037 6 -0.6190338134765625 1 Unmodified _KVPEWVDTV_ ENSG00000105372|ENST00000598742|RPS19 36.12702656103203 0.0967173616627612 4 [EP]WVKVDTV 9 4 [EP]WVKV + + 34.425 22.88 3.0986 3.2126 3.2126 46.413 0.0 0.0 0.0 0.0 0.9640156839957824 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.0 [EP]WVKVDTV 3.2126 - 125 + 1 1.07 35834.6 1.0 9089 4843 13933 HBL1_DMSO_200M_050219_2,13934 HBL1_DMSO_200M_050219_2,13934,KVPEWVDTV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13935 73.726 45.0 1143600.0 25 0 163880.0 + 45912 YYTPDRMVL 9 61 579.2866821018413 1156.5588112704825 2 579.2869750857353 MULTI CID FTMS 0 0 0 13933 832108.5 0.4919333014781052 2 -0.1811370849609375 2 Unmodified _YYTPDRMVL_ ENSG00000165688|ENST00000371717|PMPCA;ENST00000462616.1_1_9:139311477-139313651:+|nuORF;nc|ENSG00000165688|Q10713-2|PMPCA 32.78568957990786 0.1150597335874693 4 YYTPD 5 4 69.949 0.0 0.0 6.048 0.0 0.0 0.0 514.2805880182249 514.2805880182249 55.96910013008056 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + YYTPD 6.048 + + 40 + 1 1.07 42077.4 1.0 9090 4843 13933 HBL1_DMSO_200M_050219_2,13935 HBL1_DMSO_200M_050219_2,13935,YYTPDRMVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13936 73.728 3.1 15196000.0 25 0 3758500.0 + 4068 DAMKYTIVV 9 61 520.2780580728389 1038.5415632124775 2 520.2791015505791 MULTI CID FTMS 0 0 0 13933 14168408.0 0.3099872350547485 -2 0.2245559692382812 3 Unmodified _DAMKYTIVV_ ENSG00000152234|ENST00000398752|ATP5F1A;nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A 39.94969957227396 0.0757326808254658 4 {[DA]|[EG]}MKYT{I|L}VV 9 0 + 58.069 0.0 0.0 5.5914 5.5914 87.98 0.0 0.0 0.0 15.686362358410122 42.5848728513914 15.686362358410122 23.0296449544118 0 0.8182503180159344 1.154901959985743 0.8494850021680094 0.0 + + {[DA]|[EG]}MKYT{I|L}VV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[DA]|[EG]}YT{I|L}VV;{[SA]|[TG]}{[WT]|[RM]}YT{I|L}VV 5.5914;3.3739;3.0196 +;-;- + 122 1 1.07 40284.1 1.0 9091 4843 13933 HBL1_DMSO_200M_050219_2,13936 HBL1_DMSO_200M_050219_2,13936,DAMKYTIVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13937 73.732 225.0 306380.0 25 0 33402.0 + 17837 KQLDDLKVEL 10 112 600.8453419844042 1199.6761310356085 2 600.8458129763603 MULTI CID FTMS 0 0 0 13933 1373088.5 0.0051093797462445 28 -2.6519851684570312 4 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 92.20098385977256 0.0091758589193359 4 {NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}KVE{I|L} 10 4 + 88.268 0.0 0.0 7.3576 7.3576 82.831 0.0 0.0 0.0 5.673708643871706 16.532125137753454 5.673708643871706 3.133345013315264 0 1.0138793319624575 1.0969100130080565 0.805462187404089 0.6989700043360187 {NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L};[{I|L}T]AAQD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[AG]K{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[AG]D{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}[DN]K{I|L}KVE{I|L};[{I|L}A]TAQD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}[KQ]KVE{I|L};[KQ]{I|L}DD{I|L}KVE{I|L};[K{I|L}]DQD{I|L}KVE{I|L} 7.3576;7.0964;6.8847;6.5937;6.3325;6.0939;6.006;6.0052;5.9773;5.6803 -;-;-;-;-;-;-;-;+;- + 2017 1 1.07 56096.4 1.0 9092 4843 13933 HBL1_DMSO_200M_050219_2,13937 HBL1_DMSO_200M_050219_2,13937,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13938 73.733 38.0 1338700.0 25 0 140800.0 + -1 VSMLLEQICC 10 52 606.2784113474945 1210.542269761789 2 606.2784301638603 MULTI CID FTMS 0 0 0 13933 1234399.875 0.4379907615306118 -2 0.2245559692382812 5 Carbamidomethyl (C),Oxidation (M) _VSM(Oxidation (M))LLEQIC(Carbamidomethyl (C))C_ REV__ENSG00000128512|ENST00000428084|DOCK4;REV__ENST00000476846.1_7:111503332-111846439:-|nuORF;REV__nc|ENSG00000128512|Q8N1I0-2|DOCK4;REV__nc|ENSG00000128512|Q8N1I0|DOCK4 11.494710602746466 0.654671931888957 4 {I|L}PSM 4 -1 37.691 0.0 0.0 3.1135 0.0 0.0 764.3218850955765 0.0 764.3218850955765 0.0 14.390019164509267 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 {I|L}PSM 3.1135 - 38 + 1 1.07 42372.7 1.0 9093 4843 13933 HBL1_DMSO_200M_050219_2,13938 HBL1_DMSO_200M_050219_2,13938,VSMLLEQICC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13939 73.734 40.0 1186900.0 25 0 186180.0 + 12548 GVGTILSNVL 10 72 486.7902111615527 971.5658693899054 2 486.7902709841728 MULTI CID FTMS 0 0 0 13933 1012524.0625 0.8016774751995586 1 -0.1205825805664062 6 Unmodified _GVGTILSNVL_ ENSG00000111490|ENST00000539867|TBC1D30;nc|ENSG00000288591|Q9Y2I9-3|TBC1D30 30.63653989081413 0.2803493085145199 4 {[DA]|[EG]}K{I|L}{I|L}[NS]V{I|L} 9 3 + 36.634 0.0 0.0 3.7706 3.7706 72.257 0.0 0.0 0.0 5.2287874528033775 14.409999832893597 5.2287874528033775 5.2287874528033775 0 0.6677353201839438 1.0 0.3807196863200844 0.3807196863200844 {[DA]|[EG]}K{I|L}{I|L}[NS]V{I|L};[NS]{I|L}{I|L}{I|L}[NS]V{I|L};{[DA]|[EG]}K{I|L}[WK]V{I|L};[NS]{I|L}{I|L}[WK]V{I|L};{[SA]|[TG]}[VG]{I|L}{I|L}[NS]V{I|L};{[VA]|[{I|L}G]}[SG]{I|L}{I|L}[NS]V{I|L};{I|L}{I|L}[NS]{I|L}[NS]V{I|L};{[SA]|[TG]}[VG]{I|L}[WK]V{I|L};{[VA]|[{I|L}G]}[SG]{I|L}[WK]V{I|L};{I|L}{I|L}[NS][WK]V{I|L} 3.7706;3.2324;3.1038;2.5656;1.5652;1.3551;1.2498;0.89287;0.68277;0.58302 -;-;-;-;-;-;-;-;-;- 123 1 1.07 44995.7 1.0 9094 4843 13933 HBL1_DMSO_200M_050219_2,13939 HBL1_DMSO_200M_050219_2,13939,GVGTILSNVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13940 73.738 230.0 333430.0 25 0 28095.0 + 17846 KQLDDLKVEL 10 125 400.8994449725738 1199.6765055179214 3 400.8991577029228 MULTI CID FTMS 0 0 0 13933 824237.375 0.0056155179921704 28 -2.6519851684570312 7 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 21.799462835604743 0.4789045305445478 4 {NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L} 6 6 24.956 0.0 0.0 2.0802 0.0 0.0 0.0 484.275842477802 484.275842477802 4.197275526017634 0.0 0.0 0.0 0 0.5 0.9208187539523752 0.7614393726401688 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KQ]D{I|L} 2.0802 - 285 1 1.07 60498.6 1.0 9095 4843 13933 HBL1_DMSO_200M_050219_2,13940 HBL1_DMSO_200M_050219_2,13940,KQLDDLKVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13941 73.74 87.0 1012000.0 25 0 94464.0 + 32585 SAVELPKI 8 83 428.7608690880684 855.5071852429369 2 428.7607604861259 MULTI CID FTMS 0 0 0 13933 702678.0625 0.5678563913668506 2 -0.1811370849609375 8 Unmodified _SAVELPKI_ ENSG00000185515|ENST00000330045|BRCC3;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;nc|ENSG00000185515|P46736-3|BRCC3;nc|ENSG00000185515|P46736-4|BRCC3;nc|ENSG00000185515|P46736|BRCC3 36.12702656103203 0.299085846329477 4 {[SA]|[TG]}VE{I|L}PK{I|L} 8 0 + 70.596 0.0 0.0 8.2519 8.2519 97.81 0.0 0.0 0.0 58.60622826835021 9.930479595456802 9.930479595456802 68.13175890063947 0 1.0387254899964358 2.0 0.4247425010840047 0.0 + + {[SA]|[TG]}VE{I|L}PK{I|L};[KP]{I|L}{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8.2519;0.28804 +;- + 89 + 1 1.07 75395.1 1.0 9096 4843 13933 HBL1_DMSO_200M_050219_2,13941 HBL1_DMSO_200M_050219_2,13941,SAVELPKI False True SAVELPKI 73.740365 428.760760486126 65284926.0 13933.0 nc|ENSG00000185515|P46736-4|BRCC3;;nc|ENSG00000185515|P46736-3|BRCC3;;ENST00000508559.1_1_5:175735354-175735840:+|nuORF;;ENST00000453705.1_3_X:154299864-154348422:+|nuORF;;ENSG00000185515|ENST00000330045|BRCC3;;nc|ENSG00000185515|P46736|BRCC3 4.3558932940165205 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13942 73.745 251.0 394350.0 25 0 66966.0 + 23970 LVSLYMRIR 9 108 575.8430692907657 1149.6715856483313 2 575.8430663943291 MULTI CID FTMS 0 0 0 13933 370559.875 0.2530653175217537 7 -0.7185745239257812 9 Unmodified _LVSLYMRIR_ REV__ENSG00000154025|ENST00000395645|SLC5A10;REV__nc|ENSG00000154025|A0PJK1-2|SLC5A10;REV__nc|ENSG00000154025|A0PJK1-3|SLC5A10;REV__nc|ENSG00000154025|A0PJK1-4|SLC5A10;REV__nc|ENSG00000154025|A0PJK1-5|SLC5A10 2.059750862983233 0.8427793054688888 4 V 1 -1 10.181 0.0 0.0 0.88556 0.0 0.0 1032.5922227106344 0.0 1032.5922227106344 0.0 5.2865109653383495 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.88556 + + 57 + 1 1.07 83804.0 1.0 9097 4843 13933 HBL1_DMSO_200M_050219_2,13942 HBL1_DMSO_200M_050219_2,13942,LVSLYMRIR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13943 73.747 90.0 452230.0 25 0 28124.0 + 39986 VGAVSNIDHNS 11 85 556.7723928680358 1111.5302328028715 2 556.7720214724541 MULTI CID FTMS 0 0 0 13933 303536.3125 0.156806060565359 2 -0.1811370849609375 10 Unmodified _VGAVSNIDHNS_ REV__ENSG00000196935|ENST00000355086|SRGAP1;REV__nc|ENSG00000196935|Q7Z6B7-2|SRGAP1 5.731851221503515 0.8481046878870278 4 {[QV]|[N{I|L}]|[RA]|[KV]}V 3 -1 15.15 0.0 0.0 1.363 0.0 0.0 0.0 782.3121596429684 782.3121596429684 4.692737604564035 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V 1.363 - 48 1 1.07 38008.8 1.0 9098 4843 13933 HBL1_DMSO_200M_050219_2,13943 HBL1_DMSO_200M_050219_2,13943,VGAVSNIDHNS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13944 73.75 150.0 667160.0 25 0 125610.0 + 32501 SALGYLHSL 9 110 480.76189617977445 959.5092394263488 2 480.7620422244072 MULTI CID FTMS 0 0 0 13933 292227.875 0.4673136058622913 -1 0.1499099731445312 11 Unmodified _SALGYLHSL_ ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1 68.08070601005525 0.0218408846571049 4 {[SA]|[TG]}{I|L}GY{I|L}HTV 9 2 + 64.809 0.0 0.0 6.7544 6.7544 81.67 0.0 0.0 0.0 22.632192780232785 3.565473235138114 3.565473235138114 3.565473235138114 0 0.6139829889124311 1.6989700043360187 1.4291746928241125 0.0 {[SA]|[TG]}{I|L}GY{I|L}HTV;{[SA]|[TG]}{I|L}GY{I|L}HS{I|L};{[SA]|[TG]}[{M(Oxidation (M))|F}V]S{I|L}HTV;{[SA]|[TG]}[{M(Oxidation (M))|F}V]S{I|L}HS{I|L};{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}HTV;{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}HS{I|L};{M(Oxidation (M))|F}AA{I|L}{[DS]|[MA]|[CV]|TT}HTV;{[SA]|[TG]}{I|L}[HT]{I|L}[YR];{[SA]|[TG]}{I|L}G[R{M(Oxidation (M))|F}]G[RP];{M(Oxidation (M))|F}AA{I|L}{[DS]|[MA]|[CV]|TT}HS{I|L} 6.7544;6.3828;4.0773;3.7057;3.5856;3.2141;3.0125;2.9873;2.9146;2.6409 -;+;-;-;-;-;-;-;-;- + 973 + 1 1.07 82761.3 1.0 9099 4843 13933 HBL1_DMSO_200M_050219_2,13944 HBL1_DMSO_200M_050219_2,13944,SALGYLHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13945 73.764 785.0 250870.0 25 0 38707.0 -1 0 130 959.113057108936 2874.3173419270083 3 959.4435302615166 MULTI CID FTMS 0 0 0 13933 237731.71875 0.0748818924888946 8 -0.7851791381835938 12 4 {[QV]|[N{I|L}]|[RA]|[KV]}PGEVYWDS 10 -1 42.647 0.0 0.0 1.4837 0.0 0.0 0.0 1710.7672680346834 1710.7672680346834 17.56675312145341 0.0 0.0 0.0 0 0.0 0.0 1.1307196863200843 1.055462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}PGEVYWDS 1.4837 - 10344 1 1.07 133218.3 1.0 9100 4843 13933 HBL1_DMSO_200M_050219_2,13945 HBL1_DMSO_200M_050219_2,13945, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13946 73.766 134.0 474430.0 25 0 59561.0 + -1 YQTALHLAV 9 115 508.2827950399989 507.2755185733989 1 508.2822448611259 MULTI CID FTMS 0 0 0 13933 236383.265625 1.0 0 0.0 13 nc|ENSG00000146232|O00221|NFKBIE;ENSG00000146232|ENST00000619360|NFKBIE 4 [VS]R{M(Oxidation (M))|F} 4 -1 + 15.591 0.0 0.0 3.0735 3.0735 63.873 0.0 0.0 0.0 1.3261374105402268 1.3261374105402268 1.3261374105402268 1.3261374105402268 0 0.0 0.638272163982407 0.0 0.0 [VS]R{M(Oxidation (M))|F};[YQ]VV;[H{I|L}]A[PA];{[QV]|[N{I|L}]|[RA]|[KV]}[YV] 3.0735;2.812;1.2771;0.090202 -;-;-;- 82 + 1 1.07 55535.4 1.0 9101 4843 13933 HBL1_DMSO_200M_050219_2,13946 HBL1_DMSO_200M_050219_2,13946, False False YQTALHLAV 73.766369 508.282244861126 1950038.625 13933.0 nc|ENSG00000146232|O00221|NFKBIE;;ENSG00000146232|ENST00000619360|NFKBIE 0.8846397399902344 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13947 73.775 493.0 446710.0 25 0 90155.0 28166 PPSAPPQV 8 177 396.716838717714 791.419124502228 2 396.7161743044853 MULTI CID FTMS 0 0 0 13933 212129.4375 0.4870762111228859 -1 0.1499099731445312 14 Unmodified _PPSAPPQV_ ENSG00000091656|ENST00000651372|ZFHX4;nc|ENSG00000091656|Q86UP3-2|ZFHX4;nc|ENSG00000091656|Q86UP3-4|ZFHX4;nc|ENSG00000091656|Q86UP3|ZFHX4 15.768221252438446 0.6779680726941459 4 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L}R 6 7 + 57.725 0.0 0.0 7.2939 7.2939 84.053 0.0 0.0 0.0 26.478174818886373 4.929155219028942 4.929155219028942 4.075221787320515 0 0.3807196863200844 2.0 0.0 0.805462187404089 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L}R;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}ER;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}ER{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}WV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}ER;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}WV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}ADV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}ADV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[RE]|[WV]}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}W[{M(Oxidation (M))|F}V]{I|L} 7.2939;6.779;6.6711;6.1183;6.0521;5.7379;5.6476;4.9208;4.7188;2.8391 -;-;-;-;-;-;-;-;-;- 189 + 1 1.07 172666.6 1.0 9102 4843 13933 HBL1_DMSO_200M_050219_2,13947 HBL1_DMSO_200M_050219_2,13947,PPSAPPQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13948 73.789 800.0 847290.0 25 0 126190.0 15228 IPFRLREI 8 248 348.5505082083792 1042.6296952253376 3 348.5499755740166 MULTI CID FTMS 0 0 0 13933 201585.953125 0.0362390670747201 -3 0.2960281372070312 15 Unmodified _IPFRLREI_ ENSG00000185298|ENST00000329214|CCDC137 45.69961567697781 0.159474709770503 4 {I|L}P{M(Oxidation (M))|F}RR{I|L}E{I|L} 8 2 + 55.923 0.0 0.0 5.3636 5.3636 73.526 0.0 0.0 0.0 9.873636255777347 4.56948844866681 4.56948844866681 2.218487496163569 0 0.5986198691406328 1.2218487496163564 0.3807196863200844 1.1549471895720984 {I|L}P{M(Oxidation (M))|F}RR{I|L}E{I|L};{I|L}P{M(Oxidation (M))|F}RE[R{I|L}]{I|L};{I|L}{I|L}MRR{I|L}E{I|L};{I|L}{I|L}MRE[R{I|L}]{I|L};{I|L}{I|L}E[VS]K{I|L}E{I|L};{I|L}{I|L}E[VS]TVVA{I|L};{I|L}{I|L}E[VS][{I|L}V]SA{I|L};{I|L}{I|L}E[VS]T{I|L}{I|L}GV 5.3636;5.1508;4.3479;4.1351;3.9594;1.9314;1.5228;1.421 -;-;-;-;-;-;-;- 1321 + 1 1.07 559111.8 0.7400000095367432 9103 4843 13933 HBL1_DMSO_200M_050219_2,13948 HBL1_DMSO_200M_050219_2,13948,IPFRLREI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13949 73.796 312.0 324440.0 25 0 38753.0 + 36557 TALAQIMTI 9 146 489.2707149363038 976.5268769394075 2 489.2693359255791 MULTI CID FTMS 0 0 0 13933 167907.109375 0.6734238275131392 5 -0.4976272583007812 16 Oxidation (M) _TALAQIM(Oxidation (M))TI_ ENSG00000097046|ENST00000234626|CDC7 41.8396318013385 0.0653578398400075 4 [TA]{I|L}AQ{I|L} 6 3 32.841 0.0 0.0 3.3631 0.0 0.0 0.0 376.1566126173952 376.1566126173952 4.8649408280835615 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [TA]{I|L}AQ{I|L} 3.3631 + + 995 1 1.07 80186.1 1.0 9104 4843 13933 HBL1_DMSO_200M_050219_2,13949 HBL1_DMSO_200M_050219_2,13949,TALAQIMTI True False TALAQIMTI 73.795756 489.269335925579 1702155.625 13933.0 ENSG00000097046|ENST00000234626|CDC7 3.530110518137614 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13950 73.81 800.0 131060.0 25 0 5427.6 + -1 CFCVWAQPPC 10 167 662.7685972444679 1323.5226415557356 2 662.7690307497978 MULTI CID FTMS 0 0 0 13933 149866.890625 1.0 0 0.0 17 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))FC(Carbamidomethyl (C))VWAQPPC(Carbamidomethyl (C))_ REV__ENST00000222990.7_1_7:2293201-2294050:-|nuORF 21.74664581756881 0.480091245866545 4 [QA]DWAAYEDQQ 11 -1 + 46.489 0.0 0.0 3.5126 3.5126 66.044 0.0 0.0 0.0 8.265388705500143 7.367585652254185 7.367585652254185 1.8391659656763863 0 0.9604093769761876 0.3979400086720376 0.0 1.610924374808178 [QA]DWAAYEDQQ;[QA]DADAAYEDQQ;[QA]DW[{M(Oxidation (M))|F}T]GEDQQ;[QA]DAWAYEDQQ;[QA]DAD[{M(Oxidation (M))|F}T]GEDQQ;[QA]DW[{M(Oxidation (M))|F}T]WDQQ;[WD]AAQAYEDQQ;[QA]DAD[{M(Oxidation (M))|F}T]WDQQ;[WD]AQAAYEDQQ;[QA]DA[YE]AGEDQQ 3.5126;3.3736;3.2085;3.0856;3.0696;2.9391;2.8881;2.7975;2.6765;2.6426 -;-;-;-;-;-;-;-;-;- 3349 1 1.07 84155.3 0.8100000023841858 9105 4843 13933 HBL1_DMSO_200M_050219_2,13950 HBL1_DMSO_200M_050219_2,13950,CFCVWAQPPC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13951 73.812 138.0 566020.0 25 0 40176.0 + + 15470 GTVRFFNSV 9 140 513.7718830265712 1025.5292131199424 2 513.7721435427666 MULTI CID FTMS 0 0 0 13933 153006.09375 0.6935467661164054 -2 0.2245559692382812 18 Unmodified _IPRSAPCPSV_ nc|ENSG00000075975|Q9H000-2|MKRN2;ENSG00000075975|ENST00000170447|MKRN2 13.90604991867851 0.6142120002215601 4 PSV 3 -1 24.157 0.0 0.0 2.3555 0.0 0.0 724.3654690787299 0.0 724.3654690787299 0.0 13.187587626244124 0.0 0.0 0 0.5 0.0 0.1989700043360188 0.0 PSV 2.3555 + + 796 + 1 1.07 64737.5 1.0 9106 4843 13933 HBL1_DMSO_200M_050219_2,13951 HBL1_DMSO_200M_050219_2,13951,IPRSAPCPSV False False GTVRFFNSV 73.812392 513.772143542767 2129179.0 13933.0 nc|ENSG00000075975|Q9H000-2|MKRN2;;ENSG00000075975|ENST00000170447|MKRN2 2.902060508728028 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13952 73.826 800.0 34599.0 25 0 5733.0 -1 0 36 1145.143359363079 0 1145.143359363079 PEAK CID FTMS 0 0 0 -1 0 19 4 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.1739 0.0 0.0 1850.111259886512 288.07270227603755 2138.183962162549 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.1739 - 6 + 1 1.07 31379.7 0.5799999833106995 9107 4843 13933 HBL1_DMSO_200M_050219_2,13952 HBL1_DMSO_200M_050219_2,13952, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13953 73.841 800.0 318890.0 25 0 56621.0 + 21551 LPKAALLV 8 212 412.7839663047197 823.5533796762394 2 412.7836181521416 MULTI CID FTMS 0 0 0 13933 117938.3984375 0.0224448229691455 -10 1.0450515747070312 20 Unmodified _LPKAALLV_ ENSG00000022556|ENST00000448584|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;nc|ENSG00000022556|Q9NX02-2|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2 44.40701690623563 0.1655546087385432 4 [{I|L}P]KAA{I|L}{I|L}V 8 0 + 37.617 0.0 0.0 4.5677 4.5677 75.556 0.0 0.0 0.0 5.740312677277196 13.399480616943508 5.740312677277196 5.740312677277196 0 0.805462187404089 1.0969100130080565 0.0 0.0 + + [{I|L}P]KAA{I|L}{I|L}V;[KP]{I|L}AA{I|L}{I|L}V;[{I|L}A]AKP{I|L}{I|L}V;[{I|L}A]A{I|L}KP{I|L}V;{I|L}{I|L}AAKP{I|L}V;[{I|L}A]AK{I|L}P{I|L}V;[{I|L}A][KP]A{I|L}{I|L}V 4.5677;3.8707;3.4655;3.0636;2.9407;2.8862;2.4479 +;-;-;-;-;-;- + 218 1 1.07 199219.2 0.6000000238418579 9108 4843 13933 HBL1_DMSO_200M_050219_2,13953 HBL1_DMSO_200M_050219_2,13953,LPKAALLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13955 73.846 6.6 8286000.0 25 0 939310.0 21658 LPLKLSHV 8 63 453.7924634572879 0 453.7924682497978 PEAK CID FTMS 0 0 0 13954 5889024.0 0.18157443541033 10 -0.9351654052734376 1 Unmodified _LPLKLSHV_ ENSG00000173621|ENST00000309602|LRFN4 15.847184025352805 0.4758297917908462 4 PP 2 7 14.776 0.0 0.0 1.6317 0.0 0.0 113.08404475554217 595.3577974908811 708.4418422464233 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 PP 1.6317 - 76 + 1 1.077 49427.8 1.0 9109 4844 13954 HBL1_DMSO_200M_050219_2,13955 HBL1_DMSO_200M_050219_2,13955,LPLKLSHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13956 73.847 16.0 3658300.0 25 0 338420.0 + 15608 IPYSPDVQI 9 74 516.2740905813038 1030.5336282294074 2 516.2747070193291 MULTI CID FTMS 0 0 0 13954 3096928.75 0.383052505189479 3 -0.306671142578125 2 Unmodified _IPYSPDVQI_ ENSG00000127463|ENST00000477853|EMC1;ENST00000461353.1_1_1:19545799-19546215:-|nuORF;nc|ENSG00000127463|Q8N766-2|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-4|EMC1 44.40701690623563 0.0526327925666318 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]{I|L}VQ{I|L} 9 2 + 42.412 0.0 0.0 4.1155 4.1155 71.524 0.0 0.0 0.0 4.762036441594191 25.638181262758263 4.762036441594191 3.807196863200837 0 0.6677353201839438 0.0 1.4361818737241734 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]{I|L}VQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[DP]VQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]V{I|L}Q{I|L};[AG][NS]{[ET]|[MV]}{I|L}VQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]{I|L}N{I|L}{I|L};[DP]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[DP]N{I|L}{I|L};[AG][NS]{[ET]|[MV]}V{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RN]Q{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DP]VQ{I|L}{I|L} 4.1155;3.7461;3.454;3.0136;2.8766;2.7411;2.5071;2.352;2.2176;2.215 -;-;-;-;-;-;-;-;-;- 472 1 1.077 50333.3 1.0 9110 4844 13954 HBL1_DMSO_200M_050219_2,13956 HBL1_DMSO_200M_050219_2,13956,IPYSPDVQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13957 73.848 26.0 2528900.0 25 0 233240.0 + 45475 YTIQSIERI 9 80 561.8119302176177 1121.609307502035 2 561.8116943240166 MULTI CID FTMS 0 0 0 13954 1781252.125 1.0 0 0.0 3 Unmodified _YTIQSIERI_ ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2 40.23920728925047 0.0741434193262949 4 YT{I|L}QS{I|L}ER{I|L} 9 0 + 88.606 0.0 0.0 7.8999 7.8999 79.178 0.0 0.0 0.0 36.47817481888638 0.6366907986937917 0.6366907986937917 0.6366907986937917 0 0.4247425010840047 2.0 0.3494850021680094 0.6307196863200843 + + YT{I|L}QS{I|L}ER{I|L};YT{I|L}QS{I|L}E{I|L}R;YT{I|L}Q{I|L}SER{I|L};YT{I|L}Q{I|L}SE{I|L}R;YT{I|L}[AG]S{I|L}ER{I|L};YT{I|L}[AG]S{I|L}E{I|L}R;YT{I|L}[AG]{I|L}SER{I|L};YT{I|L}[AG]{I|L}SE{I|L}R;YT{I|L}Q{I|L}{NN|[MP]|[D{I|L}]|[EV]}TR;YT{I|L}[AG]{I|L}{NN|[MP]|[D{I|L}]|[EV]}TR 7.8999;7.8432;7.6315;7.5748;7.0789;7.0222;6.8105;6.7538;5.6801;4.8591 +;-;-;-;-;-;-;-;-;- + 333 + 1 1.077 57503.9 1.0 9111 4844 13954 HBL1_DMSO_200M_050219_2,13957 HBL1_DMSO_200M_050219_2,13957,YTIQSIERI True True YTIQSIERI 73.848012 561.811694324017 10896573.0 13954.0 nc|ENSG00000024048|Q8IWV8|UBR2;;ENSG00000024048|ENST00000372901|UBR2 4.9951521555582685 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13958 73.849 24.0 1948200.0 25 0 208560.0 + 44057 YIPTELDQV 9 73 539.2767777714703 1076.5390026097405 2 539.2765991091728 MULTI CID FTMS 0 0 0 13954 1701159.0 0.1653592261095019 3 -0.306671142578125 4 Unmodified _YIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 21.74664581756881 0.2544899275067181 4 [TP]E{I|L}DQ 6 3 31.688 0.0 0.0 2.9435 0.0 0.0 0.0 390.2051762760093 390.2051762760093 6.792972196075127 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 + [TP]E{I|L}DQ 2.9435 + + 228 1 1.077 45140.0 1.0 9112 4844 13954 HBL1_DMSO_200M_050219_2,13958 HBL1_DMSO_200M_050219_2,13958,YIPTELDQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13959 73.85 32.0 1637500.0 25 0 128080.0 + 41569 VPPEILNNV 9 89 497.7825498997915 993.550546866383 2 497.7823974490166 MULTI CID FTMS 0 0 0 13954 1644043.625 0.1925702449852536 9 -0.899749755859375 5 Unmodified _VPPEILNNV_ ENSG00000198730|ENST00000361367|CTR9 32.30548876998284 0.1201446275138228 4 [VP][EP]{I|L}{I|L}NNV 9 0 + 45.168 0.0 0.0 4.5461 4.5461 71.636 0.0 0.0 0.0 3.0102999566398125 2.727562184969372 2.727562184969372 3.0102999566398125 0 0.5044321917401079 2.0 0.0 0.0 + + [VP][EP]{I|L}{I|L}NNV;[EP]{I|L}PV{I|L}NNV;[VP][EP]{I|L}QVNV;[EP]{I|L}P{I|L}VNNV;[EP]P{I|L}V{I|L}NNV;[EP]{I|L}PVQVNV;[EP]PV{I|L}{I|L}NNV;[EP]P{I|L}VQVNV;[EP]P{I|L}{I|L}VNNV;{[QN]|[E{I|L}]|[KN]}PPV{I|L}NNV 4.5461;4.2431;4.2431;3.9401;3.9401;3.9401;3.6371;3.6371;3.6371;3.6371 +;-;-;-;-;-;-;-;-;- + 525 1 1.077 43697.7 1.0 9113 4844 13954 HBL1_DMSO_200M_050219_2,13959 HBL1_DMSO_200M_050219_2,13959,VPPEILNNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13960 73.852 36.0 1211600.0 25 0 119430.0 + 42054 VQVESVNLQV 10 83 557.8091202038066 1113.6036874744132 2 557.8093139529228 MULTI CID FTMS 0 0 0 13954 1486982.625 0.6706971170624837 -1 0.1205825805664062 6 Unmodified _VQVESVNLQV_ ENSG00000070010|ENST00000263202|UFD1;ENST00000459854.5_1_22:19442175-19463025:-|nuORF;ENST00000489406.1_1_22:19455337-19466647:-|nuORF;nc|ENSG00000070010|Q92890-1|UFD1;nc|ENSG00000070010|Q92890-3|UFD1 70.33199760932243 0.018925923965799 4 {[QV]|[N{I|L}]|[RA]|[KV]}VSEVN{I|L}QV 10 2 + 84.14 0.0 0.0 7.5556 7.5556 77.702 0.0 0.0 0.0 17.346368802282015 8.819459175083608 8.819459175083608 0.3566687589218276 0 0.4436726795685343 1.3979400086720375 1.642159058960253 0.9916440611282626 {[QV]|[N{I|L}]|[RA]|[KV]}VSEVN{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}EVSVN{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VESVN{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VSENV{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}EVSNV{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VESNV{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VSEVGG{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}EVSVGG{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VESVGG{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}VSEVQVQV 7.5556;7.5236;7.5196;6.9434;6.9114;6.9074;6.7327;6.7006;6.6966;6.2047 -;-;+;-;-;-;-;-;-;- + 949 1 1.077 41317.6 1.0 9114 4844 13954 HBL1_DMSO_200M_050219_2,13960 HBL1_DMSO_200M_050219_2,13960,VQVESVNLQV True True VQVESVNLQV 73.851548 557.809313952923 37277688.0 13954.0 ENSG00000070010|ENST00000263202|UFD1;;ENST00000459854.5_1_22:19442175-19463025:-|nuORF;;nc|ENSG00000070010|Q92890-3|UFD1;;nc|ENSG00000070010|Q92890-1|UFD1;;ENST00000489406.1_1_22:19455337-19466647:-|nuORF 7.89730437596639 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13961 73.853 49.0 848390.0 25 0 163870.0 + -1 PLILCSFRK 9 71 567.3299654973393 1132.6453780614786 2 567.3303100466728 MULTI CID FTMS 0 0 0 13954 1080814.0 0.2855115968431935 7 -0.6645965576171875 7 Carbamidomethyl (C) _PLILC(Carbamidomethyl (C))SFRK_ REV__ENST00000204726.7_3_12:133346563-133346842:-|nuORF 1.844237919475145 0.850302753031785 4 {M(Oxidation (M))|F}[RK] 3 -1 8.9524 0.0 0.0 0.7904 0.0 0.0 683.3619862287125 0.0 683.3619862287125 0.0 5.853481135844875 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[RK] 0.7904 + + 4 1 1.077 39935.7 1.0 9115 4844 13954 HBL1_DMSO_200M_050219_2,13961 HBL1_DMSO_200M_050219_2,13961,PLILCSFRK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13962 73.854 32.0 1426100.0 25 0 97471.0 + 13508 HMMPDLPNV 9 79 527.245410747834 1052.4762685624678 2 527.2460815310478 MULTI CID FTMS 0 0 0 13954 1043931.5625 0.7079401558079057 -1 0.1205825805664062 8 Unmodified _HMMPDLPNV_ ENSG00000134014|ENST00000256398|ELP3;nc|ENSG00000134014|Q9H9T3-2|ELP3;nc|ENSG00000134014|Q9H9T3-4|ELP3;nc|ENSG00000134014|Q9H9T3-5|ELP3 36.04419817259434 0.0971720506436186 4 [QT]V{I|L}[DP]M{[{M(Oxidation (M))|F}C]|[YS]} 9 8 [QT]V + + 23.161 14.481 4.4127 2.2006 2.2006 44.746 0.0 0.0 0.0 0.0 4.476212463643417 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 [QT]V{I|L}[DP]M{[{M(Oxidation (M))|F}C]|[YS]} 2.2006 - 115 + 1 1.077 46170.4 1.0 9116 4844 13954 HBL1_DMSO_200M_050219_2,13962 HBL1_DMSO_200M_050219_2,13962,HMMPDLPNV True True HMMPDLPNV 73.854048 527.246081531048 28161210.0 13954.0 nc|ENSG00000134014|Q9H9T3-5|ELP3;;nc|ENSG00000134014|Q9H9T3-2|ELP3;;ENSG00000134014|ENST00000256398|ELP3;;nc|ENSG00000134014|Q9H9T3-4|ELP3 9.986198584238688 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13963 73.856 79.0 755830.0 25 0 135710.0 + 31682 RRLGQDPLVAP 11 68 611.3558527162176 1220.697152499235 2 611.3557617068291 MULTI CID FTMS 0 0 0 13954 902346.6875 0.8624562015551341 -2 0.2704925537109375 9 Unmodified _RRLGQDPLVAP_ REV__ENST00000485559.1_1_22:46749554-46749875:+|nuORF 2.9952420565917617 0.861016188266951 4 S 1 -1 0.71334 0.0 0.0 0.058437 0.0 0.0 627.3874733994288 503.2472323053344 1130.6347057047633 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.058437 - 5 + 1 1.077 50145.1 1.0 9117 4844 13954 HBL1_DMSO_200M_050219_2,13963 HBL1_DMSO_200M_050219_2,13963,RRLGQDPLVAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13964 73.858 71.0 729430.0 25 0 80709.0 + 18138 KTMEDTLMTV 10 83 584.7829599890397 1167.5513670448793 2 584.7833129763603 MULTI CID FTMS 0 0 0 13954 867477.8125 0.6169654091363179 -2 0.2704925537109375 10 Unmodified _KTMEDTLMTV_ ENSG00000132254|ENST00000396777|ARFIP2;nc|ENSG00000132254|P53365-2|ARFIP2;nc|ENSG00000132254|P53365-3|ARFIP2 38.61474834105838 0.1721950110283317 4 [MT]V{[SA]|[TG]}DT{I|L}MTV 11 4 + 68.562 0.0 0.0 5.8723 5.8723 77.655 0.0 0.0 0.0 3.151216546611465 10.550088832413522 3.151216546611465 3.151216546611465 0 0.8182503180159344 1.154901959985743 1.860924374808178 0.0 [MT]V{[SA]|[TG]}DT{I|L}MTV;{[TV]|[{I|L}S]}M{[SA]|[TG]}DT{I|L}MTV;[MT]WWT{I|L}MTV;{[MS]|[{M(Oxidation (M))|F}A]}M{I|L}TDWWV;{[MS]|[{M(Oxidation (M))|F}A]}M{I|L}TD{[RE]|[WV]}W;[MT]V{[ET]|[MV]}[SG]{I|L}MTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ES]|[DT]|[{I|L}C]}KT{I|L}MTV;{[TV]|[{I|L}S]}M{[ET]|[MV]}[SG]{I|L}MTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KT]DT{I|L}MTV;[MT]V{[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MTV 5.8723;5.6024;5.2652;4.6596;4.1936;4.115;3.9926;3.8451;3.7348;3.188 -;-;-;-;-;-;-;-;-;- 492 1 1.077 46186.9 1.0 9118 4844 13954 HBL1_DMSO_200M_050219_2,13964 HBL1_DMSO_200M_050219_2,13964,KTMEDTLMTV False True KTMEDTLMTV 73.85755 584.78331297636 23395964.0 13954.0 nc|ENSG00000132254|P53365-3|ARFIP2;;ENSG00000132254|ENST00000396777|ARFIP2;;nc|ENSG00000132254|P53365-2|ARFIP2 5.917158921559651 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13965 73.859 49.0 1439900.0 25 0 98807.0 + -1 KLPSNLPQL 9 106 505.3049593687145 504.2976829021145 1 505.3066589236259 MULTI CID FTMS 0 0 0 13954 701670.625 0.7635342713870229 -1 0.1205825805664062 11 ENSG00000198301|ENST00000356260|SDAD1;ENST00000504975.1_1_4:76911880-76912009:-|nuORF 4 PQ{I|L} 3 -1 17.128 0.0 0.0 3.3964 0.0 0.0 148.09118310627326 0.0 148.09118310627326 0.0 10.216525140920613 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 PQ{I|L} 3.3964 - 141 + 1 1.077 56897.7 1.0 9119 4844 13954 HBL1_DMSO_200M_050219_2,13965 HBL1_DMSO_200M_050219_2,13965, False False KLPSNLPQL 73.858854 505.306658923626 17709060.0 13954.0 ENSG00000198301|ENST00000356260|SDAD1;;ENST00000504975.1_1_4:76911880-76912009:-|nuORF 4.980519771575928 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13966 73.86 38.0 1693200.0 25 0 171640.0 + 44513 YPDGRIIMV 9 97 532.2838664939519 1062.5531800547035 2 532.2841674685478 MULTI CID FTMS 0 0 0 13954 775932.4375 0.4105037467680265 -2 0.2704925537109375 12 Unmodified _YPDGRIIMV_ ENSG00000141446|ENST00000269214|ESCO1 27.628801355627647 0.1796483985696185 4 YPD 3 6 43.416 0.0 0.0 4.086 0.0 0.0 0.0 684.3873153700331 684.3873153700331 24.973024840566467 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 + YPD 4.086 + + 51 + 1 1.077 57533.5 1.0 9120 4844 13954 HBL1_DMSO_200M_050219_2,13966 HBL1_DMSO_200M_050219_2,13966,YPDGRIIMV False True YPDGRIIMV 73.860033 532.284167468548 73786434.0 13954.0 ENSG00000141446|ENST00000269214|ESCO1 5.538968086242676 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13967 73.864 187.0 422350.0 25 0 62250.0 + 2843 AVANEEGFVRL 11 101 602.8213059386118 1203.6280589440237 2 603.3254272341728 MULTI CID FTMS 0 0 0 13954 470804.625 0.677551201034234 3 -0.306671142578125 13 Unmodified _AVANEEGFVRL_ ENSG00000143476|ENST00000366991|DTL;nc|ENSG00000143476|Q9NZJ0-2|DTL 32.037481411007896 0.3399527776090619 4 {[VA]|[{I|L}G]}ANEE{M(Oxidation (M))|F}RR{I|L} 10 2 + 46.83 0.0 0.0 3.8908 3.8908 75.662 0.0 0.0 0.0 8.999969667007171 7.115139020576834 7.115139020576834 8.450528104279016 0 0.5484550065040281 1.5228787452803376 0.0 0.3807196863200844 {[VA]|[{I|L}G]}ANEE{M(Oxidation (M))|F}RR{I|L};{[VA]|[{I|L}G]}ANE[W{M(Oxidation (M))|F}]VR{I|L};{[VA]|[{I|L}G]}AGGEE{M(Oxidation (M))|F}RR{I|L};{[VA]|[{I|L}G]}A[WM]{I|L}MARR;{[VA]|[{I|L}G]}A[WM]M{I|L}ARR;{[VA]|[{I|L}G]}[WQ]E{M(Oxidation (M))|F}RR{I|L};{[VA]|[{I|L}G]}ANE[W{M(Oxidation (M))|F}][R{I|L}]V;{[VA]|[{I|L}G]}R[HS]{I|L}YYPV;{[DA]|[EG]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}MARR;{[VA]|[{I|L}G]}RD[DG]{M(Oxidation (M))|F}RR{I|L} 3.8908;3.1887;3.1294;2.8995;2.7532;2.6831;2.6531;2.6494;2.6428;2.5793 -;-;-;-;-;-;-;-;-;- 787 + 1 1.077 60331.7 1.0 9121 4844 13954 HBL1_DMSO_200M_050219_2,13967 HBL1_DMSO_200M_050219_2,13967,AVANEEGFVRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13968 73.866 99.0 638580.0 25 0 74009.0 + 15474 IPRVPSLSV 9 86 484.3005441755142 966.5865354178284 2 484.3009521365166 MULTI CID FTMS 0 0 0 13954 418232.03125 0.451641932719064 -2 0.2704925537109375 14 Unmodified _IPRVPSLSV_ ENSG00000152464|ENST00000378197|RPP38 39.94969957227396 0.0757326808254658 4 [{I|L}P][RV][PS]{I|L}SV 9 0 + 32.377 0.0 0.0 3.3496 3.3496 73.149 0.0 0.0 0.0 1.8875393281624115 14.87712974186746 1.8875393281624115 7.213403050078782 0 0.8807196863200843 0.8860566476931632 0.5 0.0 + + [{I|L}P][RV][PS]{I|L}SV;[{I|L}P][RV][PS]S{I|L}V;[{I|L}P]A[{I|L}A]RD{I|L}V;[{I|L}P]A[{I|L}A]R{I|L}DV;[{I|L}P][RV][VG]D{I|L}V;[{I|L}P][RV][VG]{I|L}DV 3.3496;2.6034;2.598;2.5156;1.7746;1.6922 +;-;-;-;-;- + 130 1 1.077 52569.0 1.0 9122 4844 13954 HBL1_DMSO_200M_050219_2,13968 HBL1_DMSO_200M_050219_2,13968,IPRVPSLSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13969 73.878 690.0 197240.0 25 0 51131.0 -1 0 57 1162.7987859000227 3485.374528300268 3 1163.462329089642 MULTI CID FTMS 0 0 0 13954 368684.96875 0.0027100911941335 18 -1.7009963989257812 15 4 Y{M(Oxidation (M))|F} 2 -1 9.464 0.0 0.0 0.27153 0.0 0.0 1309.4894707824935 1862.768995288832 3172.258466071325 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.27153 - 17 + 1 1.077 112383.1 1.0 9123 4844 13954 HBL1_DMSO_200M_050219_2,13969 HBL1_DMSO_200M_050219_2,13969, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13970 73.882 224.0 400210.0 25 0 57079.0 27845 PLRARSIS 8 119 450.27503394605856 898.5355149589171 2 450.2748596072197 MULTI CID FTMS 0 0 0 13954 285442.84375 0.0418648633377509 5 -0.4984512329101562 16 Unmodified _PLRARSIS_ ENSG00000095637|ENST00000371247|SORBS1;nc|ENSG00000095637|Q9BX66-11|SORBS1;nc|ENSG00000095637|Q9BX66-2|SORBS1;nc|ENSG00000095637|Q9BX66-3|SORBS1;nc|ENSG00000095637|Q9BX66-5|SORBS1;nc|ENSG00000095637|Q9BX66-6|SORBS1;nc|ENSG00000095637|Q9BX66-9|SORBS1 5.760428011301431 0.7893668129297577 4 {I|L} 1 7 10.837 0.0 0.0 1.2061 0.0 0.0 767.440450727275 0.0 767.440450727275 0.0 0.7488116016666613 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2061 + + 75 + 1 1.077 72980.3 1.0 9124 4844 13954 HBL1_DMSO_200M_050219_2,13970 HBL1_DMSO_200M_050219_2,13970,PLRARSIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13971 73.889 405.0 392330.0 25 0 43305.0 -1 0 205 363.23821567250354 362.2309392059036 1 363.2375060915947 MULTI CID FTMS 0 0 0 13954 261321.9375 0.2713154521645175 8 -0.750213623046875 17 4 G 1 -1 17.787 0.0 0.0 4.9103 0.0 0.0 287.19807742787464 0.0 287.19807742787464 0.0 9.110686064968904 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 G 4.9103 - 25 + 1 1.077 124717.4 1.0 9125 4844 13954 HBL1_DMSO_200M_050219_2,13971 HBL1_DMSO_200M_050219_2,13971, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13972 73.895 300.0 461780.0 25 0 67381.0 + 9123 FFPEYTHQL 9 115 591.2849392942154 1180.5553256552307 2 591.2869750857353 MULTI CID FTMS 0 0 0 13954 233667.375 0.4651312199163475 -4 0.4166107177734375 18 Unmodified _FFPEYTHQL_ ENSG00000128708|ENST00000264108|HAT1 47.74868867922204 0.0453060283459952 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYTHQ{I|L} 9 0 + 42.828 0.0 0.0 3.6278 3.6278 64.336 0.0 0.0 0.0 7.147642715192504 15.537374224667204 7.147642715192504 0.796896906561031 0 0.3494850021680094 0.0 0.0 0.9604093769761876 + + {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYTHQ{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}E{M(Oxidation (M))|F}THQ{I|L};[{I|L}P]WT{M(Oxidation (M))|F}E{I|L}[{M(Oxidation (M))|F}E];[EP]YT{[VA]|[{I|L}G]}EP[Y{I|L}];[EP]YT[PG]E{I|L}[Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYTH[AG]{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEY[Q{I|L}][HT];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}E{M(Oxidation (M))|F}[Q{I|L}][HT];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}E{M(Oxidation (M))|F}TH[AG]{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P[QA]D{[ES]|[DT]|[{I|L}C]}Q{I|L} 3.6278;3.5603;2.545;2.3117;2.1431;2.0342;2.0286;1.9611;1.8657;1.7862 +;-;-;-;-;-;-;-;-;- + 713 + 1 1.077 108479.9 1.0 9126 4844 13954 HBL1_DMSO_200M_050219_2,13972 HBL1_DMSO_200M_050219_2,13972,FFPEYTHQL True True FFPEYTHQL 73.894749 591.286975085735 28120005.0 13954.0 ENSG00000128708|ENST00000264108|HAT1 6.958235422770183 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13973 73.898 171.0 397570.0 25 0 34146.0 + 19278 LEKQKQNLS 9 105 544.3091277453768 1086.6037025575536 2 544.3103515505791 MULTI CID FTMS 0 0 0 13954 223090.96875 0.1715650348455116 10 -0.9351654052734376 19 Unmodified _LEKQKQNLS_ REV__ENSG00000078177|ENST00000261435|N4BP2;REV__nc|ENSG00000078177|Q86UW6-2|N4BP2 10.823927491677226 0.5436922275383211 4 {[TV]|[{I|L}S]}{I|L}Y 4 -1 33.43 0.0 0.0 3.0765 0.0 0.0 0.0 607.2981661432249 607.2981661432249 20.40939380995489 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 {[TV]|[{I|L}S]}{I|L}Y 3.0765 - 198 + 1 1.077 55083.2 1.0 9127 4844 13954 HBL1_DMSO_200M_050219_2,13973 HBL1_DMSO_200M_050219_2,13973,LEKQKQNLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13974 73.902 124.0 546250.0 25 0 65335.0 -1 DALLEQAMI 9 116 510.2579559749728 1018.5013590167456 2 510.2588378787041 MULTI CID FTMS 0 0 0 13954 216698.453125 0.6234951095781776 -2 0.2704925537109375 20 Oxidation (M) _DALLEQAM(Oxidation (M))I_ ENSG00000008838|ENST00000394128|MED24;ENST00000581054.1_1_17:38192365-38210656:-|nuORF;nc|ENSG00000008838|O75448-2|MED24 23.1484247019978 0.2366544122328345 4 {[DA]|[EG]}{I|L}AA[HM]{I|L} 8 -1 32.841 0.0 0.0 3.2245 0.0 0.0 0.0 193.0837924486393 193.0837924486393 16.018506493566417 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 {[DA]|[EG]}{I|L}AA[HM]{I|L} 3.2245 - 344 1 1.077 57612.4 1.0 9128 4844 13954 HBL1_DMSO_200M_050219_2,13974 HBL1_DMSO_200M_050219_2,13974,DALLEQAMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13976 73.906 15.0 3196100.0 25 0 251710.0 + + 6426 DPLDKSIVI 9 80 500.2929639140957 998.5713748949914 2 500.2935058474541 MULTI CID FTMS 0 0 0 13975 3426238.25 1.0 0 0.0 1 Unmodified _EAARGARRI_ nc|ENSG00000108883|Q15029-3|EFTUD2;ENST00000586276.5_1_17:42928644-42931004:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;ENSG00000108883|ENST00000426333|EFTUD2 21.74664581756881 0.2544899275067181 4 {[CP]|[EA]}AEV{I|L}RV{I|L} 9 -1 + 48.07 0.0 0.0 4.8139 4.8139 71.419 0.0 0.0 0.0 2.3733439617155483 2.3733439617155483 2.3733439617155483 2.3733439617155483 0 0.4247425010840047 0.0 0.0 0.0 {[CP]|[EA]}AEV{I|L}RV{I|L};[DP]{I|L}DKS{I|L}[{I|L}V];{[CP]|[EA]}AEV{I|L}VR{I|L};[DP]{I|L}KDS{I|L}[{I|L}V];{[CP]|[EA]}AEV{I|L}{I|L}[RV];{[CP]|[EA]}AEVV{I|L}R{I|L};{[CP]|[EA]}[W{I|L}]{I|L}RV{I|L};{[CP]|[EA]}[W{I|L}]{I|L}VR{I|L};[TA][HM]KS{I|L}[{I|L}V];[PS]QQKS{I|L}[{I|L}V] 4.8139;4.5762;4.2915;3.9733;3.7166;3.4452;3.0666;2.5442;2.1352;1.9985 -;-;-;-;-;-;-;-;-;- 237 + 1 1.082 40591.2 1.0 9129 4845 13975 HBL1_DMSO_200M_050219_2,13976 HBL1_DMSO_200M_050219_2,13976,EAARGARRI False False DPLDKSIVI 73.90621 500.293505847454 9609816.0 13975.0 nc|ENSG00000108883|Q15029-3|EFTUD2;;ENST00000586276.5_1_17:42928644-42931004:-|nuORF;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 2.122503479321798 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13977 73.907 23.0 1856500.0 25 0 209060.0 + 34618 SPLPQYVTV 9 67 502.2769034436342 1002.5392539540684 2 502.2770568728447 MULTI CID FTMS 0 0 0 13975 2105108.25 1.0 0 0.0 2 Unmodified _SPLPQYVTV_ ENSG00000163872|ENST00000305135|YEATS2 24.020572477871973 0.2255576514309169 4 [{M(Oxidation (M))|F}V]V{[VA]|[{I|L}G]}VY 7 8 34.481 0.0 0.0 3.4394 0.0 0.0 0.0 222.08883081607652 222.08883081607652 7.557357201254291 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]V{[VA]|[{I|L}G]}VY 3.4394 - 275 + 1 1.082 38707.7 1.0 9130 4845 13975 HBL1_DMSO_200M_050219_2,13977 HBL1_DMSO_200M_050219_2,13977,SPLPQYVTV False True SPLPQYVTV 73.907389 502.277056872845 39569108.0 13975.0 ENSG00000163872|ENST00000305135|YEATS2 5.860641320546468 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13978 73.909 29.0 1452800.0 25 0 233590.0 + 18644 LAGQEWSSL 9 88 495.7481399103437 989.4817268874872 2 495.7485839724541 MULTI CID FTMS 0 0 0 13975 1713396.375 1.0 0 0.0 3 Unmodified _LAGQEWSSL_ REV__ENST00000431705.1_1_3:48885788-48886603:+|nuORF 23.1484247019978 0.2366544122328345 4 [WP]S[NS]{I|L}{[WT]|[RM]} 8 -1 + 29.142 0.0 0.0 2.9452 2.9452 64.054 0.0 0.0 0.0 3.802112417116064 6.989700043360188 3.802112417116064 1.638568026386693 0 0.0 1.3010299956639813 0.4247425010840047 0.0 [WP]S[NS]{I|L}{[WT]|[RM]};[WP]S[WK]{[WT]|[RM]};[{I|L}P]C(Carbamidomethyl (C))[NS]{I|L}{[WT]|[RM]};[{I|L}P]C(Carbamidomethyl (C))[WK]{[WT]|[RM]};[{I|L}P][CG][NS]{I|L}{[WT]|[RM]};{[WS]|[C(Carbamidomethyl (C)){I|L}]}P[NS]{I|L}{[WT]|[RM]};[{I|L}P][CG][WK]{[WT]|[RM]};{[WS]|[C(Carbamidomethyl (C)){I|L}]}P[WK]{[WT]|[RM]} 2.9452;2.7796;2.5609;1.9661;1.6249;1.1481;1.0231;0.98252 -;-;-;-;-;-;-;- 103 1 1.082 39694.2 1.0 9131 4845 13975 HBL1_DMSO_200M_050219_2,13978 HBL1_DMSO_200M_050219_2,13978,LAGQEWSSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13979 73.91 77.0 865540.0 25 0 142650.0 + 39359 MGAVALRI 8 98 415.7493244726917 829.4840960121834 2 415.7494689822197 MULTI CID FTMS 0 0 0 13975 837423.0 0.6783776211200194 1 -0.1367416381835937 4 Unmodified _VAGMALLR_ ENST00000398696.3_1_16:31765161-31765194:+|nuORF 34.18733598223924 0.3315367612694167 4 MGAVA{I|L}[R{I|L}] 8 4 + 74.998 0.0 0.0 9.0415 9.0415 88.192 0.0 0.0 0.0 60.359119294589824 10.356668758921828 10.356668758921828 4.771212547196626 0 1.0 1.3979400086720375 0.0 0.6861818737241735 MGAVA{I|L}[R{I|L}];MGA{I|L}G{I|L}[R{I|L}];MGAV{I|L}A[R{I|L}];MG{I|L}GA{I|L}[R{I|L}];MGA{I|L}VA[R{I|L}];MG{I|L}AG{I|L}[R{I|L}];MG{I|L}G{I|L}A[R{I|L}];MG{I|L}Q{I|L}[R{I|L}];MQVA{I|L}[R{I|L}];MG{I|L}AVA[R{I|L}] 9.0415;8.4663;8.3103;8.1941;7.7351;7.6189;7.463;7.4214;7.373;6.8878 -;-;-;-;-;-;-;-;-;- 253 + 1 1.082 59255.8 1.0 9132 4845 13975 HBL1_DMSO_200M_050219_2,13979 HBL1_DMSO_200M_050219_2,13979,VAGMALLR False False MGAVALRI 73.910335 415.74946898222 18338432.0 13975.0 ENST00000398696.3_1_16:31765161-31765194:+|nuORF 4.264502048492432 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 13980 73.912 81.0 948090.0 25 0 189530.0 + 22326 LPSIHSLL 8 86 440.26876902812194 878.5229851230439 2 440.2685729861259 MULTI CID FTMS 0 0 0 13975 826471.3125 0.3533606016189095 -4 0.4056930541992187 5 Unmodified _LPSIHSLL_ ENSG00000139438|ENST00000538780|FAM222A 56.541270873467816 0.1144128637334507 4 {I|L}PS{I|L}[HS]{I|L}{I|L} 8 0 + 48.505 0.0 0.0 5.5212 5.5212 88.826 0.0 0.0 0.0 8.068109453757657 4.793643751248951 4.793643751248951 48.50501891384965 0 1.048455006504028 2.0 0.2614393726401688 0.0 + + {I|L}PS{I|L}[HS]{I|L}{I|L} 5.5212 + + 340 + 1 1.082 68738.2 1.0 9133 4845 13975 HBL1_DMSO_200M_050219_2,13980 HBL1_DMSO_200M_050219_2,13980,LPSIHSLL True True LPSIHSLL 73.912168 440.268572986126 35966712.0 13975.0 ENSG00000139438|ENST00000538780|FAM222A 2.3557000954945884 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13981 73.916 206.0 768090.0 25 0 150540.0 -1 0 83 970.9495336942258 1939.8845144552515 2 971.451220691204 MULTI CID FTMS 0 0 0 13975 543063.5 0.9776098613639485 1 -0.1367416381835937 6 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}Y[{M(Oxidation (M))|F}T]P 11 -1 55.303 0.0 0.0 2.8509 0.0 0.0 0.0 621.2891519202257 621.2891519202257 16.88689476546468 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 1.3564921830680703 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}Y[{M(Oxidation (M))|F}T]P 2.8509 - 2904 1 1.082 108771.7 1.0 9134 4845 13975 HBL1_DMSO_200M_050219_2,13981 HBL1_DMSO_200M_050219_2,13981, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13982 73.918 90.0 614250.0 25 0 59011.0 + 31997 RVIDDSLVVGV 11 82 586.3379553737037 1170.6613578142071 2 586.3386108279228 MULTI CID FTMS 0 0 0 13975 500082.125 0.6853587555106643 -1 0.0605545043945312 7 Unmodified _RVIDDSLVVGV_ ENSG00000181544|ENST00000650831|FANCB 28.23362336080872 0.4292685378469897 4 VV{[RE]|[WV]}DS{I|L}VVGV 11 3 + 62.956 0.0 0.0 5.3778 5.3778 84.534 0.0 0.0 0.0 6.197666015370906 29.4445099740799 6.197666015370906 10.516609670558594 0 1.0 1.0969100130080565 0.3807196863200844 0.0 VV{[RE]|[WV]}DS{I|L}VVGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[EP]{[NV]|[RG]}VVGV;VV{[RE]|[WV]}DS{I|L}VRV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[EP]RRVGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[EP]{[NV]|[RG]}VRV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[EP]RRRV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[EP][KG]VV[PS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}{I|L}{[QG]|[NA]}VV[PS] 5.3778;4.4795;4.389;3.9178;3.4906;2.9327;1.7664;1.1017 -;-;-;-;-;-;-;- 219 1 1.082 50008.0 1.0 9135 4845 13975 HBL1_DMSO_200M_050219_2,13982 HBL1_DMSO_200M_050219_2,13982,RVIDDSLVVGV False True RVIDDSLVVGV 73.918133 586.338610827923 11571859.0 13975.0 ENSG00000181544|ENST00000650831|FANCB 9.47095235188802 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13983 73.922 191.0 1421300.0 25 0 321700.0 + 24711 MPALAPPEV 9 148 462.74671321944055 923.4788735056812 2 462.7462951540947 MULTI CID FTMS 0 0 0 13975 399303.21875 0.3197463340173164 -4 0.4056930541992187 8 Unmodified _MPALAPPEV_ ENSG00000132341|ENST00000543796|RAN;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 30.22481116460888 0.1466181017706357 4 [{I|L}P]AAMP 6 5 26.615 0.0 0.0 2.8821 0.0 0.0 0.0 340.1498942036548 340.1498942036548 2.6314752881387413 0.0 0.0 0.0 0 0.6549471895720984 0.721246399047171 0.0 0.0 [{I|L}P]AAMP 2.8821 - 939 1 1.082 208657.7 1.0 9136 4845 13975 HBL1_DMSO_200M_050219_2,13983 HBL1_DMSO_200M_050219_2,13983,MPALAPPEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13984 73.926 220.0 497790.0 25 0 49376.0 -1 0 134 368.7159019131948 735.4172508931896 2 368.7155029177666 MULTI CID FTMS 0 0 0 13975 259361.6875 0.156113234025674 -2 0.1811370849609375 9 4 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}K{I|L} 6 -1 + 32.925 0.0 0.0 4.477 4.477 69.018 0.0 0.0 0.0 6.478174818886373 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.3494850021680094 0.0 0.0 0.3054621874040891 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}K{I|L};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}{I|L}K;{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}K{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}{I|L}K 4.477;4.2376;3.6583;3.4189 -;-;-;- 66 + 1 1.082 90924.0 1.0 9137 4845 13975 HBL1_DMSO_200M_050219_2,13984 HBL1_DMSO_200M_050219_2,13984, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13985 73.938 678.0 569910.0 25 0 120330.0 + 31561 RQLESMIRL 9 196 573.3268145900751 1144.63907624695 2 573.3265258669853 MULTI CID FTMS 0 0 0 13975 247688.953125 0.2205524056822603 -1 0.0605545043945312 10 Unmodified _RQLESMIRL_ ENSG00000076003|ENST00000264156|MCM6 80.89551112106177 0.0172997762405973 4 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}ESM{I|L}{I|L}R 9 2 + 48.605 0.0 0.0 4.2463 4.2463 74.426 0.0 0.0 0.0 5.812053843209149 7.111687095720789 5.812053843209149 5.812053843209149 0 1.7931576817365436 0.0 0.3054621874040891 0.5891368308784531 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}ESM{I|L}{I|L}R;{[VA]|[{I|L}G]}ARESM{I|L}{I|L}R;{[QS]|[NT]}{I|L}[TP]SM{I|L}{I|L}R;[Q{I|L}]RESM{I|L}{I|L}R;{I|L}C{I|L}KW[DV]{I|L}R;{[TV]|[{I|L}S]}Q[TP]SM{I|L}{I|L}R;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}TDM{I|L}{I|L}R;{I|L}C{I|L}KW[DV]R{I|L};[VG]Q{I|L}[{M(Oxidation (M))|F}V][DV]{I|L}R;{[QS]|[NT]}{I|L}{[RE]|[WV]}M{I|L}{I|L}R 4.2463;3.7385;3.7257;3.6724;3.475;3.4723;3.3999;3.2099;3.0485;3.0469 -;-;-;-;-;-;-;-;-;- 3905 1 1.082 290465.0 1.0 9138 4845 13975 HBL1_DMSO_200M_050219_2,13985 HBL1_DMSO_200M_050219_2,13985,RQLESMIRL True True RQLESMIRL 73.937741 573.326525866985 7310005.0 13975.0 ENSG00000076003|ENST00000264156|MCM6 5.11613114674886 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13986 73.95 703.0 321490.0 25 0 22254.0 5446 DLQIGEKKLLV 11 189 628.3826836506884 1254.7508143681766 2 628.3824340701103 MULTI CID FTMS 0 0 0 13975 225451.390625 0.7295142638351176 -1 0.0605545043945312 11 Unmodified _DLQIGEKKLLV_ ENSG00000119707|ENST00000261973|RBM25;ENST00000528081.5_1_14:73544165-73555113:+|nuORF;nc|ENSG00000119707|P49756-2|RBM25;nc|ENSG00000119707|P49756-3|RBM25 4.5288652416199255 0.8537804541365391 4 Y 1 11 14.604 0.0 0.0 1.1639 0.0 0.0 1073.6764410545031 0.0 1073.6764410545031 0.0 5.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1639 - 607 + 1 1.082 167613.2 1.0 9139 4845 13975 HBL1_DMSO_200M_050219_2,13986 HBL1_DMSO_200M_050219_2,13986,DLQIGEKKLLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13987 73.952 115.0 480750.0 25 0 35165.0 + + 23781 GVDVTLPRV 9 91 478.29696739915056 954.5793818651013 2 478.2953369021416 MULTI CID FTMS 0 0 0 13975 204249.21875 0.3742143672529571 2 -0.2461166381835937 12 Unmodified _LVCRLRPV_ ENSG00000124942|ENST00000378024|AHNAK 9.347437153973935 0.7675937258251505 4 [VS]VVVTVD 8 -1 41.107 0.0 0.0 4.3063 0.0 0.0 0.0 153.09437144933864 153.09437144933864 24.451687839877888 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [VS]VVVTVD 4.3063 - 329 1 1.082 48138.9 1.0 9140 4845 13975 HBL1_DMSO_200M_050219_2,13987 HBL1_DMSO_200M_050219_2,13987,LVCRLRPV False False GVDVTLPRV 73.952353 478.295336902142 1593426.0 13975.0 ENSG00000124942|ENST00000378024|AHNAK 3.5427068074544272 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13988 73.966 798.0 235530.0 25 0 47683.0 -1 0 98 1132.811770385687 3395.4134817572613 3 1133.479418933392 MULTI CID FTMS 0 0 0 13975 214468.0 0.1918855422084243 -2 0.1811370849609375 13 4 YGYW 4 -1 15.918 0.0 0.0 0.4688 0.0 0.0 1781.5906800988607 1041.5613638881389 2823.152043986999 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YGYW 0.4688 - 507 + 1 1.082 147209.3 1.0 9141 4845 13975 HBL1_DMSO_200M_050219_2,13988 HBL1_DMSO_200M_050219_2,13988, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13989 73.98 800.0 135300.0 25 0 7211.2 + + 3482 YQYDPEQLDLAE 12 125 742.3403161884429 741.3330397218429 1 742.3401977419853 MULTI CID FTMS 0 0 0 13975 178065.3125 0.5493716600625164 2 -0.2461166381835937 14 Unmodified _CHRGGAAA_ ENSG00000110400|ENST00000264025|NECTIN1 2.577480529830294 0.808687252328423 4 [{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}DNV 6 -1 + 48.069 0.0 0.0 6.4841 6.4841 78.55 0.0 0.0 0.0 0.4575749056067479 27.300381703526007 0.4575749056067479 2.540118005538119 0 1.3684151806525389 0.0 1.066901560044258 0.3494850021680094 [{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}DNV;{M(Oxidation (M))|F}T{M(Oxidation (M))|F}DNV;[{M(Oxidation (M))|F}T]D{M(Oxidation (M))|F}NV;{M(Oxidation (M))|F}T{M(Oxidation (M))|F}QAE;[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}DGGV;[{M(Oxidation (M))|F}T]D{M(Oxidation (M))|F}GGV;{NN|[MP]|[D{I|L}]|[EV]}QHMV;{NN|[MP]|[D{I|L}]|[EV]}AGHMV;{[{M(Oxidation (M))|F}D]|MM}T{M(Oxidation (M))|F}NV;{NN|[MP]|[D{I|L}]|[EV]}QHTE 6.4841;6.1415;6.043;5.4073;4.742;4.3009;4.2252;3.8595;3.5517;3.4492 -;-;-;-;-;-;-;-;-;- 885 1 1.082 85550.0 0.9800000190734864 9142 4845 13975 HBL1_DMSO_200M_050219_2,13989 HBL1_DMSO_200M_050219_2,13989,CHRGGAAA False False YQYDPEQLDLAE 73.980034 742.340197741985 269132.25 13975.0 ENSG00000110400|ENST00000264025|NECTIN1 3.006612777709961 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13990 73.995 800.0 295690.0 25 0 32702.0 + 44849 YPPGAFVSV 9 193 468.7456358039414 935.4767186746828 2 468.7446777224541 MULTI CID FTMS 0 0 0 13975 174605.578125 0.5776316020721789 -1 0.0605545043945312 15 Unmodified _YPPGAFVSV_ ENSG00000137055|ENST00000397292|PLAA 40.44857923139169 0.0729940656229577 4 [VS]WPYVSV 8 6 + 52.903 0.0 0.0 5.6551 5.6551 76.671 0.0 0.0 0.0 8.160816566032366 9.731975075880328 8.160816566032366 3.0546218740408904 0 1.079689690656103 1.3979400086720375 0.0501648626366045 0.0 [VS]WPYVSV;[VS]WPVYSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QPYVSV;[VS]WVPYSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QPVYSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GAPYVSV;[QP]P{M(Oxidation (M))|F}YVSV;[VS]WPVSYV;[RD]TPYVSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GAPVYSV 5.6551;5.3286;4.7828;4.4968;4.4562;4.4552;4.4548;4.3359;4.2954;4.1287 -;-;-;-;-;-;-;-;-;- 2428 1 1.082 180839.5 0.8399999737739563 9143 4845 13975 HBL1_DMSO_200M_050219_2,13990 HBL1_DMSO_200M_050219_2,13990,YPPGAFVSV True True YPPGAFVSV 73.995316 468.744677722454 8236524.5 13975.0 ENSG00000137055|ENST00000397292|PLAA 3.754733482996623 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13991 73.999 215.0 1335800.0 25 0 372440.0 + -1 CDEWWRQCDEK 11 137 777.8069012103231 1553.599249487446 2 777.8058349490166 MULTI CID FTMS 0 0 0 13975 162999.796875 0.0140833139543523 -4 0.4056930541992187 16 Carbamidomethyl (C) _C(Carbamidomethyl (C))DEWWRQCDEK_ REV__ENSG00000165457|ENST00000298223|FOLR2 5.296884461304476 0.8501568894076437 4 [YN]GVDGDYYYYY 12 -1 + 88.123 0.0 0.0 5.6722 5.6722 71.755 0.0 0.0 0.0 4.717813632786971 10.629778129126263 4.717813632786971 0.5912145211865436 0 0.7429928190999391 1.5228787452803376 1.337180496500464 1.9476212463643423 [YN]GVDGDYYYYY;[YN]RDGDYYYYY;YYDGDYVGNYYY;{[YD]|[{M(Oxidation (M))|F}M]}GDYYVGNYYY;YYDGDVYGNYYY;YYDGDYRNYYY;[YN]G[RD]DYYYYY;YYDGYDVGNYYY;YYYDGDVGNYYY;[YN]GVDGYDYYYY 5.6722;5.6342;5.3685;5.1003;4.9929;4.9602;4.8817;4.8677;4.8577;4.7835 -;-;-;-;-;-;-;-;-;- 20992 1 1.082 201623.9 1.0 9144 4845 13975 HBL1_DMSO_200M_050219_2,13991 HBL1_DMSO_200M_050219_2,13991,CDEWWRQCDEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13992 74.006 396.0 349500.0 25 0 55346.0 + 41626 VPPPPEGLI 9 154 459.76852106137 917.52248918954 2 459.7686035037041 MULTI CID FTMS 0 0 0 13975 164728.5 0.6124062609751147 6 -0.6040420532226562 17 Unmodified _VPPPPEGLI_ ENSG00000108349|ENST00000264645|CASC3;ENST00000418132.7_1_17:38296747-38323177:+|nuORF 30.22481116460888 0.1466181017706357 4 {I|L}{I|L}TMNT{I|L}{I|L} 8 7 + 43.43 0.0 0.0 4.7334 4.7334 74.63 0.0 0.0 0.0 4.28177782435273 28.10555994755921 4.28177782435273 4.32585154511203 0 1.3882104921644451 0.7695510786217261 0.0 0.0 {I|L}{I|L}TMNT{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{I|L}{I|L};{I|L}{I|L}T[C(Carbamidomethyl (C))S]V{I|L}{I|L};{[TV]|[{I|L}S]}[YN]PV{I|L}{I|L};{[TV]|[{I|L}S]}[YG]GPV{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{[HG]|PP}PPV{I|L};[{I|L}T]{I|L}MNT{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[K{I|L}]DV{I|L}{I|L};{I|L}{I|L}T[CS]GV{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}A[YK]PV{I|L} 4.7334;4.2619;4.1606;4.1507;4.0949;4.0224;3.9352;3.8873;3.8823;3.8363 -;-;-;-;-;-;-;-;-;- 2025 1 1.082 110171.8 1.0 9145 4845 13975 HBL1_DMSO_200M_050219_2,13992 HBL1_DMSO_200M_050219_2,13992,VPPPPEGLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13993 74.01 159.0 771100.0 25 0 487550.0 -1 0 74 384.2360201778224 383.2287437112224 1 384.2356445193291 MULTI CID FTMS 0 0 0 13975 151822.09375 0.07949609207638 -3 0.3310470581054687 18 4 {I|L} 1 -1 10.379 0.0 0.0 2.7082 0.0 0.0 252.1336642207912 0.0 252.1336642207912 0.0 5.774509799928715 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.7082 - 5 + 1 1.082 97708.4 1.0 9146 4845 13975 HBL1_DMSO_200M_050219_2,13993 HBL1_DMSO_200M_050219_2,13993, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13994 74.023 800.0 513670.0 25 0 18708.0 -1 0 154 1117.475028429786 2232.935503926372 2 1117.473925769329 MULTI CID FTMS 0 0 0 13975 149367.46875 0.2273717544375404 -2 0.1811370849609375 19 4 [QT]EVTA{I|L}YQ[NG][DC]YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 19 -1 [QT]EV + + 86.106 12.945 2.8313 3.8562 3.8562 48.207 0.0 0.0 0.0 0.0 43.77986943513138 0.0 0.0 0 3.5994850021680094 0.0 1.200679860468595 2.278659694992122 [QT]EVTA{I|L}YQ[NG][DC]YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.8562 - 110186 + 1 1.082 250260.9 0.6700000166893005 9147 4845 13975 HBL1_DMSO_200M_050219_2,13994 HBL1_DMSO_200M_050219_2,13994, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13995 74.038 800.0 302830.0 25 0 25231.0 -1 0 172 691.3234414692693 2070.948495008008 3 691.6578857302666 MULTI CID FTMS 0 0 0 13975 160866.25 0.2585088590803012 -4 0.4056930541992187 20 4 [YQ]{I|L}ENY[NS]{[QC]|[C(Carbamidomethyl (C))A]}CP{I|L}VE[R{I|L}] 17 -1 + 74.303 0.0 0.0 3.5879 3.5879 72.549 0.0 0.0 0.0 30.94212497064703 8.052179545139083 8.052179545139083 6.020599913279625 0 1.7288559305164175 0.0 0.4247425010840047 0.6989700043360187 [YQ]{I|L}ENY[NS]{[QC]|[C(Carbamidomethyl (C))A]}CP{I|L}VE[R{I|L}];[YQ]{I|L}ENY[NS]{[QC]|[C(Carbamidomethyl (C))A]}CP{I|L}{I|L}D[R{I|L}];[YQ]{I|L}ENY[NS]{[QC]|[C(Carbamidomethyl (C))A]}C{I|L}PVE[R{I|L}];[YQ]{I|L}ENY[QA][RD]VDC(Carbamidomethyl (C))E[R{I|L}];[YQ]{I|L}ENY[NS]{[QC]|[C(Carbamidomethyl (C))A]}C{I|L}P{I|L}D[R{I|L}];[YQ]{I|L}EN[QA]Y[RD]VDC(Carbamidomethyl (C))E[R{I|L}];[YQ]{I|L}E[QA]NY[RD]VDC(Carbamidomethyl (C))E[R{I|L}];[YQ]{I|L}ENY[WQ][VG]VDC(Carbamidomethyl (C))E[R{I|L}];[YQ]{I|L}ENY[NS]{[QC]|[C(Carbamidomethyl (C))A]}CP{I|L}VW[{I|L}V];{[QN]|[E{I|L}]|[KN]}NYQ[W{I|L}]{I|L}[NS]YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.5879;3.2972;3.2918;3.2846;3.0011;2.9554;2.8291;2.7996;2.7975;2.7634 -;-;-;-;-;-;-;-;-;- 6934 + 1 1.082 190444.9 0.8899999856948853 9148 4845 13975 HBL1_DMSO_200M_050219_2,13995 HBL1_DMSO_200M_050219_2,13995, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 13997 74.043 1.6 23324000.0 25 0 5732700.0 + 4069 DAMKYTIVV 9 55 520.2780580728389 1038.5415632124775 2 520.2793456912041 MULTI CID FTMS 0 0 0 13996 33824216.0 0.7400319920018246 1 -0.109375 1 Unmodified _DAMKYTIVV_ ENSG00000152234|ENST00000398752|ATP5F1A;nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A 39.94969957227396 0.0757326808254658 4 {[DA]|[EG]}MKYT{I|L}VV 9 0 + 57.897 0.0 0.0 5.5749 5.5749 87.685 0.0 0.0 0.0 15.686362358410122 42.41266962787186 15.686362358410122 21.268732363854987 0 0.5 1.154901959985743 0.8494850021680094 0.0 + + {[DA]|[EG]}MKYT{I|L}VV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[DA]|[EG]}YT{I|L}VV;{[SA]|[TG]}{[WT]|[RM]}YT{I|L}VV 5.5749;3.5269;3.003 +;-;- + 65 1 1.087 36705.4 1.0 9149 4846 13996 HBL1_DMSO_200M_050219_2,13997 HBL1_DMSO_200M_050219_2,13997,DAMKYTIVV True True DAMKYTIVV 74.042955 520.279345691204 1996141120.0 13996.0 nc|ENSG00000152234|P25705-2|ATP5F1A;;nc|ENSG00000152234|P25705-3|ATP5F1A;;ENSG00000152234|ENST00000398752|ATP5F1A 7.756016254425049 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 13998 74.044 26.0 1888600.0 25 0 207530.0 + 38687 TTMLNQLMME 10 56 606.2784113474945 1210.542269761789 2 606.2785522341728 MULTI CID FTMS 0 0 0 13996 2413399.5 0.8563243615709194 1 -0.109375 2 Unmodified _TTMLNQLMME_ REV__ENSG00000137812|ENST00000399668|KNL1;REV__ENST00000533001.1_1_15:40886490-40917961:+|nuORF;REV__nc|ENSG00000137812|Q8NG31-3|KNL1;REV__nc|ENSG00000137812|Q8NG31-4|KNL1;REV__nc|ENSG00000137812|Q8NG31|KNL1 11.494710602746466 0.654671931888957 4 {I|L}PSM 4 -1 37.467 0.0 0.0 3.0951 0.0 0.0 764.3214578494827 0.0 764.3214578494827 0.0 10.019797293635548 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 {I|L}PSM 3.0951 - 26 + 1 1.087 44280.2 1.0 9150 4846 13996 HBL1_DMSO_200M_050219_2,13998 HBL1_DMSO_200M_050219_2,13998,TTMLNQLMME False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 13999 74.045 40.0 1230800.0 25 0 156370.0 + 18373 KVPEWVDTV 9 75 536.7876595663572 1071.5607661995143 2 536.7874633669853 MULTI CID FTMS 0 0 0 13996 1274472.75 0.0074693242447833 9 -0.8451690673828125 3 Unmodified _KVPEWVDTV_ ENSG00000105372|ENST00000598742|RPS19 51.629811660486645 0.0367964933207742 4 [EP]WVKVDTV 9 4 + 43.082 0.0 0.0 4.0205 4.0205 73.057 0.0 0.0 0.0 5.282737771670433 5.7306842758112 5.282737771670433 5.282737771670433 0 1.1989700043360187 0.0 0.0 0.0 [EP]WVKVDTV;{[RE]|[WV]}[EP]KVDTV;{[RE]|[WV]}[TP]RVDTV;[W{M(Oxidation (M))|F}]VR[HQ]TV;{[MG]|[TS]}[HS]VKVDTV;{[QV]|[N{I|L}]|[RA]|[KV]}[EP]WVDTV;{[RE]|[WV]}[TP][VG]VDTV;[EP]WV[WR]TV;{[TV]|[{I|L}S]}[WP]RVDTV;[W{M(Oxidation (M))|F}]V[VG][HQ]TV 4.0205;3.5275;3.2466;3.0939;2.7898;2.4842;2.3873;2.3179;2.2872;2.2296 -;-;-;-;-;+;-;-;-;- + 223 1 1.087 47813.1 1.0 9151 4846 13996 HBL1_DMSO_200M_050219_2,13999 HBL1_DMSO_200M_050219_2,13999,KVPEWVDTV True True KVPEWVDTV 74.045311 536.787463366985 5846834688.0 13996.0 ENSG00000105372|ENST00000598742|RPS19 6.766323566436768 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14000 74.047 64.0 1425300.0 25 0 183540.0 + 32211 RVVDYLTKL 9 83 553.8318930252258 1105.6492331172517 2 553.8321411013603 MULTI CID FTMS 0 0 0 13996 1071217.625 0.1285017716086532 -3 0.3178787231445312 4 Unmodified _RVVDYLTKL_ ENSG00000178425|ENST00000319550|NT5DC1;ENST00000417846.2_1_6:116432031-116439170:+|nuORF;nc|ENSG00000178425|Q5TFE4-2|NT5DC1 43.9818466556824 0.0535980856389242 4 DY{I|L}TK{I|L} 6 3 59.512 0.0 0.0 5.3825 0.0 0.0 354.23924452949376 0.0 354.23924452949376 0.0 46.01715619518978 0.0 0.0 0 1.589136830878453 0.0 0.8494850021680094 0.0 + DY{I|L}TK{I|L} 5.3825 + + 164 1 1.087 73517.7 1.0 9152 4846 13996 HBL1_DMSO_200M_050219_2,14000 HBL1_DMSO_200M_050219_2,14000,RVVDYLTKL True True RVVDYLTKL 74.046873 553.83214110136 144858080.0 13996.0 ENST00000417846.2_1_6:116432031-116439170:+|nuORF;;ENSG00000178425|ENST00000319550|NT5DC1;;nc|ENSG00000178425|Q5TFE4-2|NT5DC1 6.790575822194417 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14001 74.048 65.0 1670700.0 25 0 218680.0 + 155 AALPVNVKI 9 106 462.7974601349473 923.5803673366946 2 462.7975341677666 MULTI CID FTMS 0 0 0 13996 886350.5 1.0 0 0.0 5 Unmodified _AALPVNVKI_ ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF 34.10243960390752 0.1078313939113124 4 AA{I|L}PMP 6 5 44.742 0.0 0.0 4.8444 0.0 0.0 0.0 340.25312552335066 340.25312552335066 17.574703959221836 0.0 0.0 0.0 0 1.3807196863200843 1.154901959985743 0.0 0.0 AA{I|L}PMP 4.8444 - 489 1 1.087 88863.6 1.0 9153 4846 13996 HBL1_DMSO_200M_050219_2,14001 HBL1_DMSO_200M_050219_2,14001,AALPVNVKI True True AALPVNVKI 74.04844 462.797534167767 19385838.0 13996.0 ENSG00000067248|ENST00000251636|DHX29;;ENST00000504778.5_1_5:54552318-54579000:-|nuORF 3.307110071182251 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14002 74.052 163.0 502400.0 25 0 23579.0 -1 0 117 1117.475028429786 2232.935503926372 2 1117.976855456829 MULTI CID FTMS 0 0 0 13996 737007.8125 1.0 0 0.0 6 4 {[TV]|[{I|L}S]}AADTA{I|L}Y 9 -1 58.508 0.0 0.0 2.6202 0.0 0.0 0.0 1324.462334330922 1324.462334330922 26.175817930853384 0.0 0.0 0.0 0 1.0 1.3979400086720375 2.683324508278978 0.0 {[TV]|[{I|L}S]}AADTA{I|L}Y 2.6202 - 10035 1 1.087 56276.6 1.0 9154 4846 13996 HBL1_DMSO_200M_050219_2,14002 HBL1_DMSO_200M_050219_2,14002, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14003 74.053 72.0 852210.0 25 0 140340.0 + 18325 KVLELMNKL 9 94 544.331772989635 1086.64899304607 2 544.3306762576103 MULTI CID FTMS 0 0 0 13996 630028.1875 0.9204874164590032 -1 0.1367416381835937 7 Unmodified _KVLELMNKL_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 55.50274090549119 0.0285720310785888 4 KV{I|L}E{I|L}MNK{I|L} 9 0 + 64.439 0.0 0.0 5.93 5.93 85.404 0.0 0.0 0.0 48.671316343812855 10.088422267289126 10.088422267289126 9.208187539523747 0 1.0774509799928715 0.0 0.4247425010840047 0.4247425010840047 + + KV{I|L}E{I|L}MNK{I|L};KV{I|L}E{I|L}MGGK{I|L};KV{I|L}E{I|L}[C(Carbamidomethyl (C))K]VV;KV[YN]{I|L}RPVV;{I|L}{I|L}{M(Oxidation (M))|F}M{I|L}[QP]{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NY[QP]{I|L}{I|L};{I|L}{I|L}EVY[QP]{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YN]{I|L}[QP]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}VY[QP]{I|L}{I|L};{I|L}{I|L}D{I|L}Y[QP]{I|L}{I|L} 5.93;5.0827;3.4721;1.9802;1.0418;0.8832;0.50885;0.12321;0.081033;0.069774 +;-;-;-;-;-;-;-;-;- + 442 + 1 1.087 51953.8 1.0 9155 4846 13996 HBL1_DMSO_200M_050219_2,14003 HBL1_DMSO_200M_050219_2,14003,KVLELMNKL True True KVLELMNKL 74.053378 544.33067625761 5107159.5 13996.0 nc|ENSG00000102900|Q8N1F7-2|NUP93;;ENSG00000102900|ENST00000308159|NUP93 3.198586861292521 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14004 74.056 157.0 576510.0 25 0 102060.0 29940 QSLLQIIYSL 10 124 589.3431502497217 1176.6717475662433 2 589.3431884646416 MULTI CID FTMS 0 0 0 13996 574248.625 0.174519651932371 -8 0.8277740478515625 8 Unmodified _QSLLQIIYSL_ ENSG00000075539|ENST00000358350|FRYL 5.296884461304476 0.7021353017287152 4 QDK 3 9 12.92 0.0 0.0 1.098 0.0 0.0 217.22437315393705 585.2380465143186 802.4624196682557 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 QDK 1.098 - 75 + 1 1.087 73696.3 1.0 9156 4846 13996 HBL1_DMSO_200M_050219_2,14004 HBL1_DMSO_200M_050219_2,14004,QSLLQIIYSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14005 74.065 495.0 316820.0 25 0 55744.0 + 28223 PQPLALRSMLL 11 132 619.8691645460639 1237.7237761589276 2 619.8696166872978 MULTI CID FTMS 0 0 0 13996 449410.84375 1.0 0 0.0 9 Unmodified _PQPLALRSMLL_ REV__ENSG00000095752|ENST00000264563|IL11;REV__nc|ENSG00000095752|P20809-2|IL11 7.608950283845883 0.8392484121837455 4 R 1 -1 10.485 0.0 0.0 0.84708 0.0 0.0 619.3696024302152 459.2230623834594 1078.592664813675 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 R 0.84708 + + 52 + 1 1.087 116683.8 1.0 9157 4846 13996 HBL1_DMSO_200M_050219_2,14005 HBL1_DMSO_200M_050219_2,14005,PQPLALRSMLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14006 74.068 118.0 600190.0 25 0 57098.0 29225 QGQVLTMCP 9 109 488.7331478020535 975.4517426709068 2 488.7334472537041 MULTI CID FTMS 0 0 0 13996 416138.0625 1.0 0 0.0 10 Unmodified _QGQVLTMCP_ CON__A2AB72 21.74664581756881 0.2544899275067181 4 {I|L} 1 8 13.979 0.0 0.0 1.4331 0.0 0.0 844.3566936980538 0.0 844.3566936980538 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4331 + + 315 + 1 1.087 56396.2 1.0 9158 4846 13996 HBL1_DMSO_200M_050219_2,14006 HBL1_DMSO_200M_050219_2,14006,QGQVLTMCP False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 14007 74.077 529.0 559960.0 25 0 44435.0 + 45942 YYYDPTTGLY 10 198 628.2793342381759 1254.5441155431515 2 628.2803222537041 MULTI CID FTMS 0 0 0 13996 395214.4375 0.536482342721403 -1 0.1367416381835937 11 Unmodified _YYYDPTTGLY_ ENSG00000003756|ENST00000347869|RBM5;ENST00000489437.1_1_3:50144918-50148299:+|nuORF 46.020951573049366 0.1035046897853725 4 YYD[Q{I|L}]DY{I|L}Y 9 5 + 57.828 0.0 0.0 4.6095 4.6095 69.313 0.0 0.0 0.0 1.7415675927848184 16.478174818886373 1.7415675927848184 1.7415675927848184 0 0.75 2.0 0.3494850021680094 0.0 YYD[Q{I|L}]DY{I|L}Y;{[VA]|[{I|L}G]}ADYYDY{I|L}Y;[TP]{[SA]|[TG]}YYDY{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}QYYDY{I|L}Y;{[VA]|[{I|L}G]}GEYYDY{I|L}Y;YYDY{[SA]|[TG]}[TP]{I|L}Y;YYD[Q{I|L}]D{I|L}YY;{[VA]|[{I|L}G]}ADYYD{I|L}YY;{[VA]|[{I|L}G]}ADY{I|L}DYYY;YYY[HN]GY{I|L}Y 4.6095;4.4706;4.3832;4.3064;4.2394;3.9628;3.9348;3.796;3.7644;3.7568 -;-;-;-;-;-;-;-;-;- 3951 1 1.087 220862.5 1.0 9159 4846 13996 HBL1_DMSO_200M_050219_2,14007 HBL1_DMSO_200M_050219_2,14007,YYYDPTTGLY True True YYYDPTTGLY 74.077019 628.280322253704 16497749.0 13996.0 ENSG00000003756|ENST00000347869|RBM5;;ENST00000489437.1_1_3:50144918-50148299:+|nuORF 5.056623935699463 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14008 74.08 132.0 857910.0 25 0 47169.0 42059 VQVLRDSVL 9 163 514.8103231295548 1027.6060933259096 2 514.8111450076103 MULTI CID FTMS 0 0 0 13996 370163.0 1.0 0 0.0 12 Unmodified _VQVLRDSVL_ chr17:76275947-76276146|38|13.74|0.01|10.84|-|1|QRICH2,None|2 39.94969957227396 0.0757326808254658 4 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}S{[TV]|[{I|L}S]}PSV 10 5 + 49.604 0.0 0.0 4.8271 4.8271 69.165 0.0 0.0 0.0 29.8959679157685 0.6690596978625933 0.6690596978625933 1.1932554326627098 0 0.805462187404089 2.0 0.2887254899964357 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}S{[TV]|[{I|L}S]}PSV;{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}S[RD]{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}S[RD]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}S[TA]PT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VAA[KS]N{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}V[YV]{[HG]|PP}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}V[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}AAV[KS]N{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}V[VP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}VAA[WK]{[QV]|[N{I|L}]|[RA]|[KV]} 4.8271;4.711;4.2467;3.5069;3.0727;3.0504;2.6264;2.539;2.3745;2.3702 -;-;-;-;-;-;-;-;-;- 749 + 1 1.087 89620.2 1.0 9160 4846 13996 HBL1_DMSO_200M_050219_2,14008 HBL1_DMSO_200M_050219_2,14008,VQVLRDSVL True True NMLEAVHTI 74.079723 514.81114500761 5176880.5 13996.0 ENSG00000112742|ENST00000369798|TTK;;nc|ENSG00000112742|P33981-2|TTK 4.326090017954509 2.0 False 9.0 False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 14009 74.09 573.0 253380.0 25 0 35766.0 + 19038 LDLQPKGLAVP 11 136 575.8430692907657 1149.6715856483313 2 575.8431884646416 MULTI CID FTMS 0 0 0 13996 355660.625 0.2428902184717392 10 -0.9587631225585938 13 Unmodified _LDLQPKGLAVP_ REV__BRINP1|p.P712L|1|0.35|ENSG00000078725|chr9:119167235-119167235|G/A|missense_variant 5.296884461304476 0.8501568894076437 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AW 4 -1 14.87 0.0 0.0 1.2934 0.0 0.0 0.0 629.4123442755375 629.4123442755375 4.491421704477752 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AW 1.2934 - 289 1 1.087 114307.9 1.0 9161 4846 13996 HBL1_DMSO_200M_050219_2,14009 HBL1_DMSO_200M_050219_2,14009,LDLQPKGLAVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14010 74.093 167.0 507720.0 25 0 116280.0 + 1738 ALQENALAL 9 115 471.76709208926326 941.5196312453264 2 471.7666198611259 MULTI CID FTMS 0 0 0 13996 283461.09375 0.5958853435968613 1 -0.109375 14 Unmodified _ALQENALAL_ ENST00000524065.4_1_8:1626542-1636458:+|nuORF 32.30548876998284 0.1201446275138228 4 [{I|L}A]GEANAA{I|L}{I|L} 10 4 + 46.683 0.0 0.0 4.9582 4.9582 83.0 0.0 0.0 0.0 11.479400086720377 5.764837301042718 5.764837301042718 11.479400086720377 0 0.0 1.5228787452803376 0.2887254899964357 0.3494850021680094 [{I|L}A]GEANAA{I|L}{I|L};[Q{I|L}]EANAA{I|L}{I|L};[{I|L}A]GEAGGAA{I|L}{I|L};[{I|L}A]GG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AA{I|L}{I|L};[AG]{I|L}EANAA{I|L}{I|L};[{I|L}A]GEQQA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}ANAA{I|L}{I|L};[{I|L}A]N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AA{I|L}{I|L};[AG]E{I|L}ANAA{I|L}{I|L};[Q{I|L}]EAGGAA{I|L}{I|L} 4.9582;3.739;3.6137;3.4865;3.4554;3.4191;3.3482;3.2995;3.0645;2.761 -;-;-;-;-;-;-;-;-;- 844 1 1.087 72563.2 1.0 9162 4846 13996 HBL1_DMSO_200M_050219_2,14010 HBL1_DMSO_200M_050219_2,14010,ALQENALAL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14011 74.106 742.0 277600.0 25 0 20148.0 + 36361 SYPSVVSTL 9 184 476.753414035399 0 476.7534973025322 PEAK CID FTMS 0 0 0 13996 269847.6875 1.0 0 0.0 15 Unmodified _SYPSVVSTL_ ENSG00000084774|ENST00000264705|CAD 28.486842064014134 0.1241350795510704 4 P{I|L} 2 7 9.464 0.0 0.0 0.99464 0.0 0.0 111.96829091862146 626.3628023736936 738.3310932923151 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L} 0.99464 - 137 + 1 1.087 157022.4 1.0 9163 4846 13996 HBL1_DMSO_200M_050219_2,14011 HBL1_DMSO_200M_050219_2,14011,SYPSVVSTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14012 74.11 119.0 582690.0 25 0 47979.0 + 11803 GLMGAGIAQV 10 114 458.74976789538186 915.4849828575638 2 458.7494689822197 MULTI CID FTMS 0 0 0 13996 247033.0625 0.4378698047862779 -1 0.1367416381835937 16 Unmodified _GLMGAGIAQV_ ENSG00000084754|ENST00000380649|HADHA;ENSG00000138796|ENST00000309522|HADH;nc|ENSG00000138796|Q16836-2|HADH;nc|ENSG00000138796|Q16836-3|HADH 36.04419817259434 0.1993394420055842 4 {[VA]|[{I|L}G]}GAAM 6 5 28.594 0.0 0.0 3.1233 0.0 0.0 0.0 412.2197295218794 412.2197295218794 10.084055782000938 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}GAAM 3.1233 - 790 1 1.087 57223.1 1.0 9164 4846 13996 HBL1_DMSO_200M_050219_2,14012 HBL1_DMSO_200M_050219_2,14012,GLMGAGIAQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14013 74.116 341.0 343480.0 25 0 21367.0 + 43050 VYGIRLEHF 9 129 378.54119519646 0 378.5411559939384 PEAK CID FTMS 0 0 0 13996 241672.59375 1.0 0 0.0 17 Unmodified _VYGIRLEHF_ ENSG00000143228|ENST00000271452|NUF2;ENST00000487578.2_1_1:163295841-163298095:+|nuORF;ENST00000490881.5_1_1:163291794-163297702:+|nuORF 18.1463463914782 0.2188250594445807 4 V 1 8 6.9897 0.0 0.0 0.9257 0.0 0.0 520.9306437114764 132.04583154849846 652.9764752599748 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.9257 + + 67 + 1 1.087 103510.8 1.0 9165 4846 13996 HBL1_DMSO_200M_050219_2,14013 HBL1_DMSO_200M_050219_2,14013,VYGIRLEHF False True VYGIRLEHF 74.115709 378.541155993938 1437269.125 13996.0 ENSG00000143228|ENST00000271452|NUF2;;ENST00000490881.5_1_1:163291794-163297702:+|nuORF;;ENST00000487578.2_1_1:163295841-163298095:+|nuORF 3.3452161947886148 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14014 74.121 260.0 425980.0 25 0 43271.0 + + 27900 LPPNTFLLV 9 164 507.2661375576637 1012.5177221821274 2 507.2663757205009 MULTI CID FTMS 0 0 0 13996 218579.484375 1.0 0 0.0 18 Unmodified _PLSQPLANSS_ ENST00000488174.5_1_X:70752999-70764494:+|nuORF;ENST00000472270.1_1_X:70752999-70756209:+|nuORF 17.11289562659939 0.5604042439455784 4 {[ET]|[MV]}PAV{M(Oxidation (M))|F}NHV 9 -1 + 34.147 0.0 0.0 3.3725 3.3725 76.463 0.0 0.0 0.0 9.277034080690363 9.756499699645865 9.277034080690363 9.208187539523756 0 0.3054621874040891 0.0 0.0 0.0 {[ET]|[MV]}PAV{M(Oxidation (M))|F}NHV;{[ET]|[MV]}PAV{M(Oxidation (M))|F}GGHV;{[ET]|[MV]}{M(Oxidation (M))|F}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L};{[ET]|[MV]}PAK[HM]S{I|L};{[ET]|[MV]}PAK[MT]HV;{[ET]|[MV]}PAK[HM]TV;{[ET]|[MV]}PY{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L};{[ET]|[MV]}PAEE[KP]{I|L};[PA]V{[SA]|[TG]}P[KT]{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]G{[SA]|[TG]}P[KT]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.3725;2.4631;2.2118;1.9885;1.8179;1.5954;1.4193;0.83028;0.65211;0.6346 -;-;-;-;-;-;-;-;-;- 1010 + 1 1.087 94923.3 1.0 9166 4846 13996 HBL1_DMSO_200M_050219_2,14014 HBL1_DMSO_200M_050219_2,14014,PLSQPLANSS False False LPPNTFLLV 74.120531 507.2678 325319.5 13996.0 ENST00000488174.5_1_X:70752999-70764494:+|nuORF;;ENST00000472270.1_1_X:70752999-70756209:+|nuORF 0.9136382142702738 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14015 74.134 778.0 286340.0 25 0 24067.0 + 17838 KQLDDLKVEL 10 217 600.8453419844042 1199.6761310356085 2 600.8455688357353 MULTI CID FTMS 0 0 0 13996 219012.390625 0.0008149638372442 31 -2.9441070556640625 19 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 139.3213623244945 0.0001524790619354 4 [AG]K{I|L}DD{I|L}KVE{I|L} 11 3 + 103.79 0.0 0.0 8.6515 8.6515 79.648 0.0 0.0 0.0 0.3314686678267549 11.773174902439578 0.3314686678267549 0.3314686678267549 0 2.504432191740108 0.958607314841775 0.9489700043360187 1.5713337517843655 [AG]K{I|L}DD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L};[KQ]{I|L}DD{I|L}KVE{I|L};[AG]K{I|L}DD{I|L}VKE{I|L};[Q{I|L}]KDD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}VKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}VKE{I|L};[KQ]{I|L}DD{I|L}VKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D[AG]K{I|L}KVE{I|L} 8.6515;8.6239;8.4584;8.33;8.2435;8.2197;8.2159;8.0505;7.922;7.8599 -;-;-;+;-;-;-;-;-;- + 26621 1 1.087 158949.4 1.0 9167 4846 13996 HBL1_DMSO_200M_050219_2,14015 HBL1_DMSO_200M_050219_2,14015,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14016 74.148 798.0 338500.0 25 0 51386.0 42100 VRKREGLLHS 10 237 597.8564034796636 1193.6982540261272 2 597.8567993044853 MULTI CID FTMS 0 0 0 13996 207658.546875 0.1400659793047796 -8 0.8277740478515625 20 Unmodified _VRKREGLLHS_ ENSG00000188677|ENST00000338758|PARVB;nc|ENSG00000188677|Q9HBI1-2|PARVB;nc|ENSG00000188677|Q9HBI1-3|PARVB 3.2813086475875832 0.7114585191678878 4 PYM 3 10 11.682 0.0 0.0 0.97868 0.0 0.0 147.25960764116468 652.2351165659935 799.4947242071582 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PYM 0.97868 - 472 + 1 1.087 198044.2 1.0 9168 4846 13996 HBL1_DMSO_200M_050219_2,14016 HBL1_DMSO_200M_050219_2,14016,VRKREGLLHS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14018 74.152 15.0 4358900.0 25 0 812520.0 14992 ILRMERII 8 51 348.5505082083792 1042.6296952253376 3 348.5501891970634 MULTI CID FTMS 0 0 0 14017 3417624.25 0.6143856380466249 1 -0.07037353515625 1 Unmodified _ILRMERII_ ENSG00000118816|ENST00000237654|CCNI;nc|ENSG00000118816|Q14094-2|CCNI 12.240655878213236 0.7300809844188293 4 {I|L}{I|L}P 3 6 26.198 0.0 0.0 2.5127 0.0 0.0 0.0 716.3852161713993 716.3852161713993 19.20818753952375 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}P 2.5127 - 20 + 1 1.093 60946.7 1.0 9169 4847 14017 HBL1_DMSO_200M_050219_2,14018 HBL1_DMSO_200M_050219_2,14018,ILRMERII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14019 74.154 18.0 3170100.0 25 0 440360.0 + 22134 LPPQPKVK 8 59 453.7924634572879 0 453.7924072146416 PEAK CID FTMS 0 0 0 14017 3082706.75 0.0950481332164486 13 -1.2107925415039062 2 Unmodified _LPPQPKVK_ REV__ENSG00000204463|ENST00000676615|BAG6;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6 19.438996006549623 0.4285751805470146 4 PPP 3 -1 21.867 0.0 0.0 2.4147 0.0 0.0 113.08374060370905 498.3044527643188 611.3881933680278 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 PPP 2.4147 - 17 + 1 1.093 51120.6 1.0 9170 4847 14017 HBL1_DMSO_200M_050219_2,14019 HBL1_DMSO_200M_050219_2,14019,LPPQPKVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14020 74.155 17.0 4026400.0 25 0 335700.0 + 26552 NVIQTVPNL 9 83 499.2876224784988 0 499.2878600955009 PEAK CID FTMS 0 0 0 14017 2606812.0 0.6483925911015939 -2 0.2461166381835937 3 Unmodified _NVIQTVPNL_ ENSG00000196510|ENST00000455511|ANAPC7;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 52.268347100219714 0.0254642048063414 4 NVNV{I|L} 5 5 20.177 0.0 0.0 2.0247 0.0 0.0 246.1687375333664 208.0730074518188 454.2417449851852 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NVNV{I|L} 2.0247 - 251 + 1 1.093 60553.5 1.0 9171 4847 14017 HBL1_DMSO_200M_050219_2,14020 HBL1_DMSO_200M_050219_2,14020,NVIQTVPNL True True NVIQTVPNL 74.154683 499.287860095501 66560064.0 14017.0 nc|ENSG00000196510|Q9UJX3-2|ANAPC7;;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;;ENSG00000196510|ENST00000455511|ANAPC7 6.354651769002278 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14021 74.156 33.0 2033400.0 25 0 281000.0 + 44514 YPDGRIIMV 9 89 532.2838664939519 1062.5531800547035 2 532.2837402224541 MULTI CID FTMS 0 0 0 14017 1702590.75 0.900748374870698 1 -0.07037353515625 4 Unmodified _YPDGRIIMV_ ENSG00000141446|ENST00000269214|ESCO1 41.95555342248728 0.0647214845423414 4 YPDV 4 5 47.027 0.0 0.0 4.4258 0.0 0.0 0.0 585.3135470025999 585.3135470025999 13.098943791441968 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 YPDV 4.4258 - 167 + 1 1.093 59085.0 1.0 9172 4847 14017 HBL1_DMSO_200M_050219_2,14021 HBL1_DMSO_200M_050219_2,14021,YPDGRIIMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14022 74.157 44.0 1160800.0 25 0 119070.0 + + -1 MAYPDLNEI 9 82 541.2470341074812 1080.4795152817624 2 541.2474243044853 MULTI CID FTMS 0 0 0 14017 1242736.125 0.8534107712251603 1 -0.07037353515625 5 Oxidation (M) _QDEVPSM(Oxidation (M))FL_ chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-2|SP140;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;nc|ENSG00000079263|Q13342-6|SP140;nc|ENSG00000079263|Q13342-4|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;ENSG00000079263|ENST00000392045|SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;nc|ENSG00000079263|Q13342-3|SP140 25.399314129420983 0.2080152500878129 4 {[MS]|[{M(Oxidation (M))|F}A]}Y[DP]{I|L}NE{I|L} 9 -1 + 55.864 0.0 0.0 5.1703 5.1703 74.853 0.0 0.0 0.0 19.8106982151547 16.478174818886373 16.478174818886373 3.2783248807594845 0 0.0 1.3979400086720375 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}Y[DP]{I|L}NE{I|L};{[MS]|[{M(Oxidation (M))|F}A]}V[EP]YNE{I|L};{[MS]|[{M(Oxidation (M))|F}A]}Y[DP]{I|L}GGE{I|L};{[MS]|[{M(Oxidation (M))|F}A]}V[EP]YGGE{I|L};[VP]DQE[HD]E{I|L};[DP]Y{M(Oxidation (M))|F}A{I|L}NE{I|L};[VP]ENE[HD]E{I|L};[DP]VQE[HD]E{I|L};[DP]{I|L}NE[HD]E{I|L};[DP]Y{M(Oxidation (M))|F}A{I|L}GGE{I|L} 5.1703;4.8669;4.318;4.0146;3.3368;3.3192;3.2186;3.1738;3.0557;2.467 -;-;-;-;-;-;-;-;-;- 428 1 1.093 45709.9 1.0 9173 4847 14017 HBL1_DMSO_200M_050219_2,14022 HBL1_DMSO_200M_050219_2,14022,QDEVPSMFL False False MAYPDLNEI 74.157096 541.247424304485 17336544.0 14017.0 chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;;nc|ENSG00000079263|Q13342-5|SP140;;nc|ENSG00000079263|Q13342-2|SP140;;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-6|SP140;;nc|ENSG00000079263|Q13342-4|SP140;;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;;ENSG00000079263|ENST00000392045|SP140;;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-3|SP140 5.872369368871053 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14023 74.158 54.0 800650.0 25 0 166240.0 + 44297 YLLPNRIAVY 10 56 611.3558527162176 1220.697152499235 2 611.3564330935478 MULTI CID FTMS 0 0 0 14017 979373.125 0.9360774932668898 1 -0.07037353515625 6 Unmodified _YLLPNRIAVY_ REV__ENSG00000148215|ENST00000373680|OR5C1 3.944395688203298 0.708391353636983 4 Y 1 -1 17.474 0.0 0.0 1.4315 0.0 0.0 1039.62264185646 0.0 1039.62264185646 0.0 12.870156338638594 0.0 0.0 0 0.5 0.0 0.0 0.0 Y 1.4315 + + 4 + 1 1.093 39062.1 1.0 9174 4847 14017 HBL1_DMSO_200M_050219_2,14023 HBL1_DMSO_200M_050219_2,14023,YLLPNRIAVY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14024 74.16 60.0 1040800.0 25 0 135740.0 + 15475 IPRVPSLSV 9 77 484.3005441755142 966.5865354178284 2 484.3011962771416 MULTI CID FTMS 0 0 0 14017 899881.5 0.971767319359594 1 -0.07037353515625 7 Unmodified _IPRVPSLSV_ ENSG00000152464|ENST00000378197|RPP38 45.69961567697781 0.0497987121815769 4 V[PS]{I|L}SV 6 3 44.654 0.0 0.0 4.6197 0.0 0.0 366.237108299025 0.0 366.237108299025 0.0 32.971062485323515 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 + V[PS]{I|L}SV 4.6197 + + 87 1 1.093 54903.1 1.0 9175 4847 14017 HBL1_DMSO_200M_050219_2,14024 HBL1_DMSO_200M_050219_2,14024,IPRVPSLSV True True IPRVPSLSV 74.159981 484.301196277142 22476246.0 14017.0 ENSG00000152464|ENST00000378197|RPP38 4.703783353169759 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14025 74.161 32.0 1168800.0 25 0 85334.0 + 13509 HMMPDLPNV 9 80 527.245410747834 1052.4762685624678 2 527.2460204958916 MULTI CID FTMS 0 0 0 14017 913130.8125 0.6192378819605328 2 -0.1917800903320312 8 Unmodified _HMMPDLPNV_ ENSG00000134014|ENST00000256398|ELP3;nc|ENSG00000134014|Q9H9T3-2|ELP3;nc|ENSG00000134014|Q9H9T3-4|ELP3;nc|ENSG00000134014|Q9H9T3-5|ELP3 36.04419817259434 0.0971720506436186 4 [HM]M[DP]{I|L}PNV 9 0 [HM]M[DP]{I|L} + + 21.375 9.6658 1.3345 2.0309 2.0309 44.613 0.0 0.0 0.0 0.0 8.900925144087779 0.0 0.0 0 0.5 0.0 0.0 0.6989700043360187 + + [HM]M[DP]{I|L}PNV 2.0309 + + 56 + 1 1.093 38749.1 1.0 9176 4847 14017 HBL1_DMSO_200M_050219_2,14025 HBL1_DMSO_200M_050219_2,14025,HMMPDLPNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14026 74.162 45.0 989280.0 25 0 116000.0 + + 8658 AVIDGEFKEL 10 70 560.7985229046103 1119.5824928760203 2 560.7982665896416 MULTI CID FTMS 0 0 0 14017 868000.875 0.4406561632720819 1 -0.07037353515625 9 Unmodified _EVFQSDLGLL_ ENSG00000123131|ENST00000379341|PRDX4 29.84058131909904 0.2982332456971691 4 {[VA]|[{I|L}G]}{I|L}DW{M(Oxidation (M))|F} 6 -1 53.901 0.0 0.0 4.8144 0.0 0.0 0.0 385.2098482721313 385.2098482721313 31.180993120779945 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}{I|L}DW{M(Oxidation (M))|F} 4.8144 - 152 + 1 1.093 42870.9 1.0 9177 4847 14017 HBL1_DMSO_200M_050219_2,14026 HBL1_DMSO_200M_050219_2,14026,EVFQSDLGLL False False AVIDGEFKEL 74.162414 560.798266589642 16581595.0 14017.0 ENSG00000123131|ENST00000379341|PRDX4 5.992450555165608 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14027 74.164 82.0 913240.0 25 0 101200.0 + 31991 RVFTEANLVSV 11 63 617.84359607149 1233.6726392097798 2 617.8437988162041 MULTI CID FTMS 0 0 0 14017 755708.375 0.8856086814939339 -1 0.109375 10 Unmodified _RVFTEANLVSV_ ENSG00000112159|ENST00000369393|MDN1 19.61532865858139 0.6271255510390112 4 AN{I|L}VW 5 7 47.206 0.0 0.0 3.8265 0.0 0.0 632.3299413662311 0.0 632.3299413662311 0.0 33.22682509756042 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 AN{I|L}VW 3.8265 - 36 1 1.093 61287.7 1.0 9178 4847 14017 HBL1_DMSO_200M_050219_2,14027 HBL1_DMSO_200M_050219_2,14027,RVFTEANLVSV False True RVFTEANLVSV 74.164291 617.843798816204 13459799.0 14017.0 ENSG00000112159|ENST00000369393|MDN1 7.403852303822835 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14028 74.166 69.0 736970.0 25 0 89692.0 + 42055 VQVESVNLQV 10 82 557.8091202038066 1113.6036874744132 2 557.8091918826103 MULTI CID FTMS 0 0 0 14017 696431.125 0.3141222633788893 2 -0.1917800903320312 11 Unmodified _VQVESVNLQV_ ENSG00000070010|ENST00000263202|UFD1;ENST00000459854.5_1_22:19442175-19463025:-|nuORF;ENST00000489406.1_1_22:19455337-19466647:-|nuORF;nc|ENSG00000070010|Q92890-1|UFD1;nc|ENSG00000070010|Q92890-3|UFD1 61.60191391372663 0.0323840705564037 4 {[QV]|[N{I|L}]|[RA]|[KV]}VESVN{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 10 0 + 74.857 0.0 0.0 6.722 6.722 79.933 0.0 0.0 0.0 16.179767852945943 7.269987279362624 7.269987279362624 2.9659780392387347 0 0.3494850021680094 1.2218487496163564 1.424742501084005 0.25 + + {[QV]|[N{I|L}]|[RA]|[KV]}VESVN{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}EVSVN{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}VESVGG{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}EVSVGG{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}DNSVN{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}QVSVN{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}NSVN{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}DNSVGG{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}DGGSVN{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[Q{I|L}]DVSVN{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 6.722;6.4557;5.899;5.6327;5.2691;4.93;4.5687;4.4461;4.4461;4.3751 +;-;-;-;-;-;-;-;-;- + 699 1 1.093 47312.9 1.0 9179 4847 14017 HBL1_DMSO_200M_050219_2,14028 HBL1_DMSO_200M_050219_2,14028,VQVESVNLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14029 74.168 99.0 453400.0 25 0 47628.0 + 18139 KTMEDTLMTV 10 73 584.7829599890397 1167.5513670448793 2 584.7831909060478 MULTI CID FTMS 0 0 0 14017 643242.9375 0.4574856398517218 1 -0.07037353515625 12 Unmodified _KTMEDTLMTV_ ENSG00000132254|ENST00000396777|ARFIP2;nc|ENSG00000132254|P53365-2|ARFIP2;nc|ENSG00000132254|P53365-3|ARFIP2 34.93206674587334 0.2110832994570416 4 [MT]WWT{I|L}MTV 9 3 + 57.826 0.0 0.0 4.9528 4.9528 81.231 0.0 0.0 0.0 12.956349637772746 36.39969987625378 12.956349637772746 9.208187539523747 0 0.7429928190999391 1.2218487496163564 1.5044321917401078 0.0 [MT]WWT{I|L}MTV;[MT][HA][HQ]{I|L}MTV;{[TV]|[{I|L}S]}[HC][HQ]{I|L}MTV;[EP][DV][HQ]{I|L}MTV 4.9528;4.1641;3.7769;2.4048 -;-;-;- 66 1 1.093 42048.0 1.0 9180 4847 14017 HBL1_DMSO_200M_050219_2,14029 HBL1_DMSO_200M_050219_2,14029,KTMEDTLMTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14030 74.17 72.0 654090.0 25 0 120220.0 + -1 PLSLCFIRK 9 77 567.3299654973393 1132.6453780614786 2 567.3302490115166 MULTI CID FTMS 0 0 0 14017 536925.3125 0.1418360637051386 10 -0.9237213134765624 13 Carbamidomethyl (C) _PLSLC(Carbamidomethyl (C))FIRK_ REV__ENST00000592920.5_1_19:55649429-55652555:-|nuORF 1.844237919475145 0.850302753031785 4 M 1 -1 2.2185 0.0 0.0 0.19587 0.0 0.0 759.4866999382349 239.0923250787719 998.5790250170068 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.19587 - 4 + 1 1.093 43761.0 1.0 9181 4847 14017 HBL1_DMSO_200M_050219_2,14030 HBL1_DMSO_200M_050219_2,14030,PLSLCFIRK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14031 74.171 72.0 733350.0 25 0 42458.0 + 26034 NMLEAVHTI 9 113 514.2668862356232 1026.5192195380464 2 514.2675048708916 MULTI CID FTMS 0 0 0 14017 451232.625 1.0 0 0.0 14 Unmodified _NMLEAVHTI_ ENSG00000112742|ENST00000369798|TTK;nc|ENSG00000112742|P33981-2|TTK 39.957323273325 0.0756908302845263 4 [MN]{I|L}{M(Oxidation (M))|F}{I|L}G{I|L}E 8 6 47.349 0.0 0.0 4.6126 0.0 0.0 0.0 106.04161249332265 106.04161249332265 21.358280790384256 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.9247425010840048 0.0 [MN]{I|L}{M(Oxidation (M))|F}{I|L}G{I|L}E 4.6126 - 405 + 1 1.093 48259.4 1.0 9182 4847 14017 HBL1_DMSO_200M_050219_2,14031 HBL1_DMSO_200M_050219_2,14031,NMLEAVHTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14032 74.175 203.0 524780.0 25 0 109710.0 14078 IAPLKALV 8 104 412.7839663047197 823.5533796762394 2 412.7838317751884 MULTI CID FTMS 0 0 0 14017 444237.625 0.0845427357116655 -6 0.6518096923828125 15 Unmodified _IAPLKALV_ ENSG00000112249|ENST00000369162|ASCC3 53.57557251787612 0.1224291679108181 4 [{I|L}A]AKP{I|L}{I|L}V 8 4 + 53.721 0.0 0.0 6.5231 6.5231 80.359 0.0 0.0 0.0 5.963563388132229 5.963563388132229 5.963563388132229 3.309932190414244 0 0.8807196863200843 1.6989700043360187 0.0 0.0 [{I|L}A]AKP{I|L}{I|L}V;[{I|L}A]A{I|L}KP{I|L}V;[{I|L}A]AK{I|L}P{I|L}V;[{I|L}A]PKA{I|L}{I|L}V;{I|L}AP{I|L}KA{I|L}V;[{I|L}P]KAA{I|L}{I|L}V;{I|L}AP{I|L}{I|L}AKV;[{I|L}A]PK{I|L}A{I|L}V;[{I|L}P]KA{I|L}A{I|L}V;{I|L}AP{I|L}KAV{I|L} 6.5231;6.1212;5.9437;5.8075;5.799;5.792;5.3055;4.7109;4.6955;4.2571 -;-;-;-;+;-;-;-;-;- + 520 1 1.093 90931.1 1.0 9183 4847 14017 HBL1_DMSO_200M_050219_2,14032 HBL1_DMSO_200M_050219_2,14032,IAPLKALV True False LPKAALLV 74.175356 412.783831775188 99201576.0 14017.0 nc|ENSG00000022556|Q9NX02-4|NLRP2;;nc|ENSG00000022556|Q9NX02-3|NLRP2;;nc|ENSG00000022556|Q9NX02-2|NLRP2;;nc|ENSG00000022556|Q9NX02-5|NLRP2;;ENSG00000022556|ENST00000448584|NLRP2;;ENST00000540597.5_1_19:55476735-55501561:+|nuORF 1.3810429573059082 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14033 74.177 89.0 698280.0 25 0 72069.0 -1 0 79 505.3049593687145 504.2976829021145 1 505.3075439333916 MULTI CID FTMS 0 0 0 14017 408051.6875 0.4440280621745532 2 -0.1917800903320312 16 4 [{I|L}P]Y{I|L} 4 -1 + 23.657 0.0 0.0 4.6912 4.6912 84.046 0.0 0.0 0.0 3.519374645445623 2.7422750325201406 2.7422750325201406 21.65083033826945 0 0.2742275032520141 1.5228787452803376 0.0 0.0 [{I|L}P]Y{I|L};[KT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.6912;0.3979 -;- 69 1 1.093 54952.4 1.0 9184 4847 14017 HBL1_DMSO_200M_050219_2,14033 HBL1_DMSO_200M_050219_2,14033, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14034 74.188 608.0 604770.0 25 0 124870.0 -1 WCHHCFPCCRG 11 146 788.7970570763302 1575.5795612194604 2 788.7967407107353 MULTI CID FTMS 0 0 0 14017 375914.25 0.9552267156035572 -1 0.109375 17 4 Carbamidomethyl (C) _WC(Carbamidomethyl (C))HHC(Carbamidomethyl (C))FPC(Carbamidomethyl (C))C(Carbamidomethyl (C))RG_ ENSG00000188219|ENST00000683005|POTEE;nc|ENSG00000188219|Q6S8J3-2|POTEE;nc|ENSG00000188219|Q6S8J3-3|POTEE 1.3295316138638542 0.8688751186870782 4 YYYDGDYEYYY 11 -1 + 96.891 0.0 0.0 6.1496 6.1496 89.454 0.0 0.0 0.0 71.94261084286933 8.164482558815223 8.164482558815223 17.201593034059584 0 1.809894379144197 2.0 1.1861818737241734 0.0 YYYDGDYEYYY;YYYDY[DG]EYYY;YYYDYHH[CS]YY;YYYDY[DP][HD]YY;YYYDGDY{M(Oxidation (M))|F}[HC][KC];YYYM{M(Oxidation (M))|F}[DG]EYYY;YYYDGDYN{[MG]|[TS]}{[DS]|[MA]|[CV]|TT}N;YYYM{M(Oxidation (M))|F}[DP][HD]YY;YYYDY[DG]{M(Oxidation (M))|F}[HC][KC];YYDMGAV{[CA]|SS}EEYY 6.1496;5.0578;4.7943;4.6323;4.5534;4.5214;4.3532;4.0959;3.4616;3.2015 -;-;-;-;-;-;-;-;-;- 9660 + 1 1.093 252100.1 1.0 9185 4847 14017 HBL1_DMSO_200M_050219_2,14034 HBL1_DMSO_200M_050219_2,14034,WCHHCFPCCRG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14035 74.199 609.0 395140.0 25 0 74660.0 -1 0 105 736.4240663712467 735.4167899046466 1 736.4252197146416 MULTI CID FTMS 0 0 0 14017 356412.28125 1.0 0 0.0 18 4 DT{M(Oxidation (M))|F}{I|L}K{I|L} 6 -1 + 66.693 0.0 0.0 9.0687 9.0687 79.671 0.0 0.0 0.0 12.40417829939986 0.0050844460847798 0.0050844460847798 0.0050844460847798 0 1.7302046884880935 1.0 0.0 0.3807196863200844 DT{M(Oxidation (M))|F}{I|L}K{I|L};DT{M(Oxidation (M))|F}{I|L}{I|L}K;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}K{I|L};[{M(Oxidation (M))|F}T]D{I|L}K{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TDK{I|L};[{M(Oxidation (M))|F}T]{I|L}DK{I|L};{[MG]|[TS]}{M(Oxidation (M))|F}{I|L}R{I|L};[K{I|L}]{M(Oxidation (M))|F}TD{I|L};[{M(Oxidation (M))|F}T]S{I|L}[VG]{I|L};{[MG]|[TS]}{M(Oxidation (M))|F}{I|L}[VG]{I|L} 9.0687;9.068;7.382;5.8833;3.7995;3.56;3.1154;2.3002;1.8967;1.8345 -;-;-;-;-;-;-;-;-;- 325 + 1 1.093 171872.0 1.0 9186 4847 14017 HBL1_DMSO_200M_050219_2,14035 HBL1_DMSO_200M_050219_2,14035, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14036 74.21 642.0 906500.0 25 0 187540.0 + 45699 YYDGDIGNYYY 11 167 703.2825654179 1404.5505779025998 2 703.2830688357353 MULTI CID FTMS 0 0 0 14017 322084.5 0.0423351766648738 -4 0.4272537231445312 19 Unmodified _YYDGDIGNYYY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 122.17920374332846 0.0470516731196552 4 YYDGDY{I|L}GNYY 11 2 + 104.35 0.0 0.0 7.4295 7.4295 84.19 0.0 0.0 0.0 19.973929432293573 16.575773191777927 16.575773191777927 3.975914135653994 0 1.0994850021680094 2.0 2.392159058960253 0.3807196863200844 YYDGDY{I|L}GNYY;YYDGD{I|L}GNYYY;YYDGYD{I|L}GNYY;YYDGD{I|L}YGNYY;YYDG{I|L}DGNYYY;YYDGD{I|L}GYNYY;YYDGDY{I|L}GGGYY;YYDYGD{I|L}GNYY;YYDG{I|L}DYGNYY;YYDG{I|L}DGYNYY 7.4295;7.1464;6.7273;6.7224;6.661;6.6416;6.5085;6.3378;6.237;6.1562 -;+;-;-;-;-;-;-;-;- + 33117 1 1.093 405468.1 1.0 9187 4847 14017 HBL1_DMSO_200M_050219_2,14036 HBL1_DMSO_200M_050219_2,14036,YYDGDIGNYYY True True YYDGDIGNYYY 74.209833 703.283068835735 311907520.0 14017.0 ENSG00000196591|ENST00000519065|HDAC2;;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 3.840198834737142 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14037 74.218 472.0 700600.0 25 0 55561.0 + 4567 DAYRMLSRL 9 214 375.5343909761269 1123.5813435285809 3 375.5339538455009 MULTI CID FTMS 0 0 0 14017 248932.140625 0.3620816982260887 -2 0.2461166381835937 20 Unmodified _DAYRMLSRL_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 57.24910588100465 0.0276051374632116 4 DAYRM{I|L}{I|L}SR 9 2 + 95.991 0.0 0.0 8.5433 8.5433 95.422 0.0 0.0 0.0 81.04238878888184 11.49024709818258 11.49024709818258 14.208187539523747 0 1.079689690656103 2.0 0.2396518287104437 0.9432598516168867 DAYRM{I|L}{I|L}SR;DA{I|L}Y{[CA]|SS}{I|L}{I|L}SR;DAY{I|L}{[CA]|SS}{I|L}{I|L}SR;DA{I|L}Y{[WT]|[RM]}{I|L}SR;DA{I|L}R{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}SR;DAY{I|L}{[WT]|[RM]}{I|L}SR;DA{I|L}Y{[CA]|SS}{I|L}KD{I|L};DAY{I|L}{[CA]|SS}{I|L}KD{I|L};DAYR[KS]AASR;WY[VG]M{I|L}{I|L}SR 8.5433;7.2788;7.0778;6.4533;6.3675;6.2524;6.2098;6.0088;5.4567;5.3624 -;-;-;-;-;-;-;-;-;- 884 + 1 1.093 261828.8 1.0 9188 4847 14017 HBL1_DMSO_200M_050219_2,14037 HBL1_DMSO_200M_050219_2,14037,DAYRMLSRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14039 74.223 21.0 2596200.0 25 0 371630.0 + 27728 PLLSHSLL 8 76 440.26876902812194 878.5229851230439 2 440.2687560915947 MULTI CID FTMS 0 0 0 14038 1798256.875 0.7688508017213727 -1 0.07037353515625 1 Unmodified _PLLSHSLL_ REV__ENSG00000100823|ENST00000216714|APEX1;REV__ENST00000557054.1_1_14:20923524-20925664:+|nuORF;REV__ENST00000557159.5_1_14:20924026-20925664:+|nuORF 42.96799951952854 0.1846367511955703 4 {I|L}P 2 -1 42.831 0.0 0.0 4.8753 0.0 0.0 0.0 665.3680513971311 665.3680513971311 17.769250191953674 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}P 4.8753 - 180 + 1 1.098 50475.1 1.0 9189 4848 14038 HBL1_DMSO_200M_050219_2,14039 HBL1_DMSO_200M_050219_2,14039,PLLSHSLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14040 74.224 51.0 1631200.0 25 0 217670.0 -1 0 89 368.7159019131948 735.4172508931896 2 368.7155944705009 MULTI CID FTMS 0 0 0 14038 1276179.375 0.7681492642513493 1 -0.1214065551757812 2 4 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}K{I|L} 6 -1 + 35.278 0.0 0.0 4.797 4.797 68.406 0.0 0.0 0.0 6.478174818886373 0.7918124604762511 0.7918124604762511 0.7918124604762511 0 0.3807196863200844 0.0 0.0 0.3054621874040891 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}K{I|L};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}{I|L}K;{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}K{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}{I|L}K 4.797;4.6894;3.8466;3.7389 -;-;-;- 90 + 1 1.098 69617.1 1.0 9190 4848 14038 HBL1_DMSO_200M_050219_2,14040 HBL1_DMSO_200M_050219_2,14040, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14041 74.225 39.0 1796900.0 25 0 260880.0 + 31932 RVAQLEQVYI 10 55 609.8459086152881 1217.677264297376 2 609.8460571169853 MULTI CID FTMS 0 0 0 14038 1108666.5 0.4647851320440295 -1 0.07037353515625 3 Unmodified _RVAQLEQVYI_ ENSG00000100028|ENST00000215829|SNRPD3;nc|ENSG00000286070|P62318-2|SNRPD3 28.49450938151212 0.328477364964909 4 P{I|L}EQVY{I|L} 7 4 58.021 0.0 0.0 4.7649 0.0 0.0 357.2135487287125 0.0 357.2135487287125 0.0 51.03154177741963 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.3807196863200844 P{I|L}EQVY{I|L} 4.7649 - 137 1 1.098 60745.4 1.0 9191 4848 14038 HBL1_DMSO_200M_050219_2,14041 HBL1_DMSO_200M_050219_2,14041,RVAQLEQVYI False True RVAQLEQVYI 74.225216 609.846057116985 35541404.0 14038.0 ENSG00000100028|ENST00000215829|SNRPD3;;nc|ENSG00000286070|P62318-2|SNRPD3 6.050174236297607 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14042 74.227 51.0 1951600.0 25 0 245390.0 + 24712 MPALAPPEV 9 94 462.74671321944055 923.4788735056812 2 462.7467529177666 MULTI CID FTMS 0 0 0 14038 1040036.6875 0.8328205295030279 -1 0.07037353515625 4 Unmodified _MPALAPPEV_ ENSG00000132341|ENST00000543796|RAN;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 32.116972079565 0.1225432171549407 4 [PA]{I|L}AMP 6 4 30.315 0.0 0.0 3.2827 0.0 0.0 0.0 340.1510927414466 340.1510927414466 16.33593778117195 0.0 0.0 0.0 0 0.7742275032520141 0.7958800173440752 0.0 0.0 [PA]{I|L}AMP 3.2827 - 299 1 1.098 82029.1 1.0 9192 4848 14038 HBL1_DMSO_200M_050219_2,14042 HBL1_DMSO_200M_050219_2,14042,MPALAPPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14043 74.233 364.0 607950.0 25 0 139250.0 -1 0 81 1132.811770385687 3395.4134817572613 3 1133.480639636517 MULTI CID FTMS 0 0 0 14038 975825.25 0.8730755040235433 1 -0.1214065551757812 5 4 GV{I|L}ST 5 -1 20.085 0.0 0.0 0.59152 0.0 0.0 2481.922772384017 453.2129305475219 2935.135702931539 0.0 0.0 0.0 0.0 0 0.0 0.0 1.360924374808178 0.0 GV{I|L}ST 0.59152 - 428 + 1 1.098 178735.7 1.0 9193 4848 14038 HBL1_DMSO_200M_050219_2,14043 HBL1_DMSO_200M_050219_2,14043, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14044 74.235 90.0 620550.0 25 0 122170.0 + 18923 SQLKWLDRV 9 62 573.3268145900751 1144.63907624695 2 573.3271972537041 MULTI CID FTMS 0 0 0 14038 529842.0 0.4717930543819048 2 -0.220947265625 6 Unmodified _LCLEDKRRI_ FANCD2|p.R174Q|1|0.47|ENSG00000144554|chr3:10039308-10039308|G/A|missense_variant;ENST00000438741.1_1_3:10076402-10082221:+|nuORF;ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2 12.174745833636583 0.5071271664557081 4 {I|L}C{I|L}KW{NN|[MP]|[D{I|L}]|[EV]}RV 9 5 + 44.313 0.0 0.0 3.8714 3.8714 77.234 0.0 0.0 0.0 21.63717667091607 4.492620162003895 4.492620162003895 9.208187539523747 0 0.0 0.0 0.0 0.4247425010840047 {I|L}C{I|L}KW{NN|[MP]|[D{I|L}]|[EV]}RV;{I|L}C{I|L}K{[DA]|[EG]}{NN|[MP]|[D{I|L}]|[EV]}RV 3.8714;3.0669 -;- 51 + 1 1.098 47946.6 1.0 9194 4848 14038 HBL1_DMSO_200M_050219_2,14044 HBL1_DMSO_200M_050219_2,14044,LCLEDKRRI False False SQLKWLDRV 74.235124 573.327197253704 4487850.0 14038.0 FANCD2|p.R174Q|1|0.47|ENSG00000144554|chr3:10039308-10039308|G/A|missense_variant;;ENST00000438741.1_1_3:10076402-10082221:+|nuORF;;ENSG00000144554|ENST00000675286|FANCD2;;nc|ENSG00000144554|Q9BXW9-1|FANCD2;;nc|ENSG00000144554|Q9BXW9-4|FANCD2;;nc|ENSG00000144554|Q9BXW9-3|FANCD2 3.991477409998576 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14045 74.238 116.0 630600.0 25 0 77568.0 + 9124 FFPEYTHQL 9 91 591.2849392942154 1180.5553256552307 2 591.2855712771416 MULTI CID FTMS 0 0 0 14038 502368.71875 1.0 0 0.0 7 Unmodified _FFPEYTHQL_ ENSG00000128708|ENST00000264108|HAT1 47.74868867922204 0.0453060283459952 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYTHQ{I|L} 9 0 + 45.175 0.0 0.0 3.8266 3.8266 67.216 0.0 0.0 0.0 21.287700070393285 5.917996027618244 5.917996027618244 2.001962355242952 0 0.3494850021680094 0.0 0.0 1.3684151806525389 + + {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYTHQ{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}E{M(Oxidation (M))|F}THQ{I|L};[TP][W{I|L}]{M(Oxidation (M))|F}E{I|L}[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}E{M(Oxidation (M))|F}TH[AG]{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYTH[AG]{I|L};[TP][MN]{M(Oxidation (M))|F}[KA]P[{M(Oxidation (M))|F}E];{[QN]|[E{I|L}]|[KN]}K[C(Carbamidomethyl (C))N]E{I|L}[{M(Oxidation (M))|F}E];[TP][MN]R{[CA]|SS}{I|L}[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}E{[QG]|[NA]}{[CP]|[EA]}Q{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P[KA]M{[CP]|[EA]}Q{I|L} 3.8266;3.657;2.1259;1.9502;1.8875;1.5349;1.4197;1.4074;1.2887;1.1996 +;-;-;-;-;-;-;-;-;- + 335 + 1 1.098 65513.0 1.0 9195 4848 14038 HBL1_DMSO_200M_050219_2,14045 HBL1_DMSO_200M_050219_2,14045,FFPEYTHQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14046 74.239 58.0 856570.0 25 0 57394.0 + 34619 SPLPQYVTV 9 90 502.2769034436342 1002.5392539540684 2 502.2772094607353 MULTI CID FTMS 0 0 0 14038 486040.3125 0.2308861373280922 3 -0.2875518798828125 8 Unmodified _SPLPQYVTV_ ENSG00000163872|ENST00000305135|YEATS2 18.1463463914782 0.3454829746528889 4 {[TV]|[{I|L}S]}P[QP]YVTV 9 2 {[TV]|[{I|L}S]}P[QP]YV + + 19.45 16.955 2.1615 1.9401 1.9401 44.543 0.0 0.0 0.0 0.0 -2.860527937172609 -2.860527937172609 0.0 0 0.0 0.0 0.3252574989159953 0.0 {[TV]|[{I|L}S]}P[QP]YVTV 1.9401 - 95 + 1 1.098 43451.3 1.0 9196 4848 14038 HBL1_DMSO_200M_050219_2,14046 HBL1_DMSO_200M_050219_2,14046,SPLPQYVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14047 74.243 215.0 530790.0 25 0 146360.0 -1 YYYESRCCRNT 11 108 786.3198560202453 1570.6251591072903 2 786.3201782107353 MULTI CID FTMS 0 0 0 14038 426882.9375 1.0 0 0.0 9 2 Carbamidomethyl (C) _YYYESRC(Carbamidomethyl (C))C(Carbamidomethyl (C))RNT_ ENSG00000155890|ENST00000286349|TRIM42;nc|ENSG00000155890|Q8IWZ5-2|TRIM42 3.5964929083625545 0.858179447565866 4 YYNG{[QS]|[NT]}GNYY 10 -1 59.926 0.0 0.0 3.8154 0.0 0.0 0.0 358.14043614495944 358.14043614495944 34.05769755925996 0.0 0.0 0.0 0 0.0 2.0 1.5356668758921828 1.610924374808178 YYNG{[QS]|[NT]}GNYY 3.8154 - 6595 1 1.098 84017.6 1.0 9197 4848 14038 HBL1_DMSO_200M_050219_2,14047 HBL1_DMSO_200M_050219_2,14047,YYYESRCCRNT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14048 74.245 109.0 523110.0 25 0 42790.0 29144 QFEQIVAVY 9 99 548.7893319604275 1095.5641109876549 2 548.7893554568291 MULTI CID FTMS 0 0 0 14038 342969.0625 0.8193522233354287 -1 0.07037353515625 10 Unmodified _QFEQIVAVY_ ENSG00000165675|ENST00000394363|ENOX2;nc|ENSG00000165675|Q16206|ENOX2 11.640296217721598 0.521594087909532 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L} 3 6 25.106 0.0 0.0 2.2916 0.0 0.0 0.0 704.3279512994749 704.3279512994749 3.6523403976488567 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L} 2.2916 - 122 + 1 1.098 46806.5 1.0 9198 4848 14038 HBL1_DMSO_200M_050219_2,14048 HBL1_DMSO_200M_050219_2,14048,QFEQIVAVY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14049 74.257 677.0 631990.0 25 0 79077.0 + -1 MPTCCMWNFCW 11 147 796.7810617843687 1591.547570635537 2 796.7808105349541 MULTI CID FTMS 0 0 0 14038 326509.6875 1.0 0 0.0 11 3 Carbamidomethyl (C) _MPTC(Carbamidomethyl (C))C(Carbamidomethyl (C))MWNFC(Carbamidomethyl (C))W_ REV__ENST00000206595.10_1_14:31061530-31061584:+|nuORF 0.3070304955306653 0.8736993455979228 4 YYYDGDV 7 -1 83.04 0.0 0.0 5.2176 0.0 0.0 0.0 713.1908692125468 713.1908692125468 27.59659467257059 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.6861818737241734 0.0 YYYDGDV 5.2176 - 2120 + 1 1.098 290742.1 1.0 9199 4848 14038 HBL1_DMSO_200M_050219_2,14049 HBL1_DMSO_200M_050219_2,14049,MPTCCMWNFCW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14050 74.26 150.0 481610.0 25 0 63027.0 + -1 FYGRLGDCTSI 11 82 430.20594592637735 1287.596008379332 3 430.2062255740166 MULTI CID FTMS 0 0 0 14038 276506.78125 1.0 0 0.0 12 Carbamidomethyl (C) _FYGRLGDC(Carbamidomethyl (C))TSI_ REV__ENSG00000134028|ENST00000256412|ADAMDEC1;REV__nc|ENSG00000134028|O15204-2|ADAMDEC1 5.047519993296601 0.8513334072183365 4 APT 3 -1 17.362 0.0 0.0 1.3484 0.0 0.0 606.2528818641096 409.1829622858032 1015.4358441499128 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.6643943297944485 0.0 APT 1.3484 - 77 + 1 1.098 64800.5 1.0 9200 4848 14038 HBL1_DMSO_200M_050219_2,14050 HBL1_DMSO_200M_050219_2,14050,FYGRLGDCTSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14051 74.273 712.0 212310.0 25 0 13636.0 37318 TITKQITPYV 10 186 582.335248833607 1162.655944734014 2 582.3350707888603 MULTI CID FTMS 0 0 0 14038 257117.296875 0.2040766524751261 -6 0.6475372314453125 13 Unmodified _TITKQITPYV_ ENSG00000158286|ENST00000377939|RNF207 6.723162845929126 0.6955379296933136 4 VVQ 3 9 16.911 0.0 0.0 1.4545 0.0 0.0 0.0 833.4382683026264 833.4382683026264 5.652165235758599 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 VVQ 1.4545 - 788 1 1.098 117402.3 1.0 9201 4848 14038 HBL1_DMSO_200M_050219_2,14051 HBL1_DMSO_200M_050219_2,14051,TITKQITPYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14052 74.285 745.0 374950.0 25 0 13951.0 + 32138 RVPKSLPYVL 10 214 586.364045666723 1170.713538400246 2 586.3642455935478 MULTI CID FTMS 0 0 0 14038 225913.984375 0.9205348647806174 1 -0.1214065551757812 14 Unmodified _RVPKSLPYVL_ chr12:54459453-54460377|33|11.94|0.67|4.16|-|ENST00000546931|GTSF1,GTSF1;ENSG00000170627|ENST00000305879|GTSF1;ENST00000546575.1_1_12:54852895-54857111:-|nuORF;ENST00000552395.5_1_12:54852895-54867341:-|nuORF 40.23920728925047 0.1550410903091231 4 [RV][KP]S{I|L}V{M(Oxidation (M))|F}{I|L}{I|L} 10 3 + 50.572 0.0 0.0 4.3198 4.3198 69.667 0.0 0.0 0.0 3.0250711483967123 19.923581641377982 3.0250711483967123 2.430380486862944 0 0.9386218330464626 0.6777807052660807 1.2288559305164173 0.1307196863200844 [RV][KP]S{I|L}V{M(Oxidation (M))|F}{I|L}{I|L};[RV][KP]VTV{M(Oxidation (M))|F}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}A]VAV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}V]AAV{I|L};[RV][KP]S{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{[QV]|[N{I|L}]|[RA]|[KV]}VVRV{I|L};[RV][KP]VT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}A]VG{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}V]AG{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}A]R{I|L}{I|L} 4.3198;4.1122;3.9932;3.8428;3.6666;3.5382;3.459;3.3356;3.1852;3.1815 -;-;-;-;+;-;-;-;-;- + 3969 1 1.098 209054.9 1.0 9202 4848 14038 HBL1_DMSO_200M_050219_2,14052 HBL1_DMSO_200M_050219_2,14052,RVPKSLPYVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14053 74.288 50.0 850140.0 25 0 81089.0 + 922 AFASFVFGLS 10 76 523.2699364760682 0 523.2708618044853 PEAK CID FTMS 0 0 0 14038 238584.4375 1.0 0 0.0 15 Unmodified _AFASFVFGLS_ REV__ENSG00000174326|ENST00000574600|SLC16A11;REV__nc|ENSG00000174326|Q8NCK7|SLC16A11 10.823927491677226 0.3685635357628707 4 TN 2 -1 12.391 0.0 0.0 1.1863 0.0 0.0 316.17420149128367 510.2365206354125 826.4107221266961 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TN 1.1863 - 37 + 1 1.098 42637.4 1.0 9203 4848 14038 HBL1_DMSO_200M_050219_2,14053 HBL1_DMSO_200M_050219_2,14053,AFASFVFGLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14054 74.302 800.0 143360.0 25 0 31975.0 -1 0 63 1163.457987468611 3487.352133006033 3 1163.795825183392 MULTI CID FTMS 0 0 0 14038 200686.59375 0.0016387374629434 22 -2.031494140625 16 4 ES 2 -1 10.362 0.0 0.0 0.29712 0.0 0.0 2831.1226647845515 437.12714563541255 3268.249810419964 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 ES 0.29712 - 21 + 1 1.098 97673.3 0.7400000095367432 9204 4848 14038 HBL1_DMSO_200M_050219_2,14054 HBL1_DMSO_200M_050219_2,14054, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14055 74.316 800.0 158820.0 25 0 32509.0 + -1 RECECMCLCMC 11 145 804.7656613900223 0 804.7657958865166 PEAK CID FTMS 0 0 0 14038 177361.09375 1.0 0 0.0 17 5 Carbamidomethyl (C) _REC(Carbamidomethyl (C))EC(Carbamidomethyl (C))MC(Carbamidomethyl (C))LC(Carbamidomethyl (C))MC(Carbamidomethyl (C))_ REV__ENST00000278426.7_2_11:57252034-57252334:-|nuORF 0.0 0.4761840153648598 4 YD 2 -1 23.271 0.0 0.0 1.4476 0.0 0.0 344.1337477222601 982.2668551080686 1326.4006028303288 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.8494850021680094 0.0 YD 1.4476 - 333 + 1 1.098 88726.2 0.8899999856948853 9205 4848 14038 HBL1_DMSO_200M_050219_2,14055 HBL1_DMSO_200M_050219_2,14055,RECECMCLCMC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14056 74.323 400.0 711000.0 25 0 64260.0 + 42925 VVRHLTVL 8 163 468.8031820764723 935.5918112197446 2 468.8032104372978 MULTI CID FTMS 0 0 0 14038 179740.5 0.3975896993386957 -2 0.17974853515625 18 Unmodified _VVRHLTVL_ REV__ENSG00000158246|ENST00000289166|TENT5B 18.13498045792455 0.6430038125133779 4 {[TV]|[{I|L}S]}RH{I|L}VV{I|L} 8 -1 + 50.092 0.0 0.0 5.354 5.354 85.776 0.0 0.0 0.0 5.424916561153204 31.02395946118904 5.424916561153204 14.645494821832443 0 0.7614393726401688 0.7958800173440752 0.0 0.0 {[TV]|[{I|L}S]}RH{I|L}VV{I|L};[{I|L}P][WP]{I|L}VV{I|L};[QP]P[RK]VV{I|L} 5.354;3.7887;3.6301 -;-;- 973 1 1.098 218435.0 1.0 9206 4848 14038 HBL1_DMSO_200M_050219_2,14056 HBL1_DMSO_200M_050219_2,14056,VVRHLTVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14057 74.326 74.0 451050.0 25 0 64337.0 + 12407 GTIGSRDSNL 10 74 510.2579559749728 1018.5013590167456 2 510.2574951052666 MULTI CID FTMS 0 0 0 14038 176376.8125 0.5074797648569378 2 -0.220947265625 19 Unmodified _GTIGSRDSNL_ REV__ENST00000426198.5_1_7:43921528-43965754:-|nuORF 9.38312468134398 0.6832340498775793 4 {I|L} 1 -1 15.485 0.0 0.0 1.5203 0.0 0.0 887.4062642675253 0.0 887.4062642675253 0.0 5.40598692756766 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5203 + + 75 + 1 1.098 30130.5 1.0 9207 4848 14038 HBL1_DMSO_200M_050219_2,14057 HBL1_DMSO_200M_050219_2,14057,GTIGSRDSNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14058 74.34 800.0 118090.0 25 0 6357.5 + -1 LPYTGAHDGSFATL 14 147 725.3540049994232 1448.6934570656465 2 725.3536865115166 MULTI CID FTMS 0 0 0 14038 148219.28125 0.7655063092713489 1 -0.1214065551757812 20 Carbamidomethyl (C) _SHWWFC(Carbamidomethyl (C))LSLTL_ nc|ENSG00000064687|Q8IZY2-2|ABCA7;ENSG00000064687|ENST00000263094|ABCA7 12.240655878213236 0.7805268987462184 4 {NN|[MP]|[D{I|L}]|[EV]}C{M(Oxidation (M))|F}E[HV]YP{I|L}T{I|L} 12 -1 + 48.69 0.0 0.0 3.361 3.361 74.142 0.0 0.0 0.0 7.126845649921101 35.564560037859934 7.126845649921101 8.442124970647036 0 0.8252574989159953 0.8538719643217619 0.0 0.6861818737241735 {NN|[MP]|[D{I|L}]|[EV]}C{M(Oxidation (M))|F}E[HV]YP{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}C{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]HH{M(Oxidation (M))|F}AT{I|L};{[QN]|[E{I|L}]|[KN]}QE[KP][C(Carbamidomethyl (C))N]{M(Oxidation (M))|F}AT{I|L};{[QN]|[E{I|L}]|[KN]}QE[QP]HH{M(Oxidation (M))|F}AT{I|L};{[QN]|[E{I|L}]|[KN]}QE[EP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}AT{I|L};{[QN]|[E{I|L}]|[KN]}QE{[WT]|[RM]}PD{M(Oxidation (M))|F}AT{I|L};{[QN]|[E{I|L}]|[KN]}QE[EP][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}AT{I|L};{[QN]|[E{I|L}]|[KN]}QE{[WT]|[RM]}[MD]{I|L}AT{I|L};{NN|[MP]|[D{I|L}]|[EV]}C{M(Oxidation (M))|F}[{I|L}P][Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}AT{I|L};[{I|L}T]{M(Oxidation (M))|F}[MD][HV]YP{I|L}T{I|L} 3.361;2.7782;2.7071;2.6424;2.5874;2.5512;2.5169;2.3954;2.3076;2.3008 -;-;-;-;-;-;-;-;-;- 909 1 1.098 69345.7 0.8399999737739563 9208 4848 14038 HBL1_DMSO_200M_050219_2,14058 HBL1_DMSO_200M_050219_2,14058,SHWWFCLSLTL False False LPYTGAHDGSFATL 74.339564 725.353686511517 2549625.5 14038.0 nc|ENSG00000064687|Q8IZY2-2|ABCA7;;ENSG00000064687|ENST00000263094|ABCA7 4.176480770111084 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14060 74.344 4.3 12077000.0 25 0 3609000.0 + -1 CDEWWRQCDEK 11 70 777.8069012103231 1553.599249487446 2 777.8079711794853 MULTI CID FTMS 0 0 0 14059 11573966.0 1.0 0 0.0 1 Carbamidomethyl (C) _C(Carbamidomethyl (C))DEWWRQCDEK_ REV__ENSG00000165457|ENST00000298223|FOLR2 2.735195868890462 0.8622431031272658 4 Y[RN]YYYYY 8 -1 38.461 0.0 0.0 2.4756 0.0 0.0 287.0760670392594 0.0 287.0760670392594 0.0 12.474702404264022 0.0 0.0 0 0.4247425010840047 0.0 0.0 1.2302046884880935 Y[RN]YYYYY 2.4756 - 355 1 1.102 41088.1 1.0 9209 4849 14059 HBL1_DMSO_200M_050219_2,14060 HBL1_DMSO_200M_050219_2,14060,CDEWWRQCDEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14061 74.345 6.7 9657800.0 25 0 1575300.0 + 32212 RVVDYLTKL 9 61 553.8318930252258 1105.6492331172517 2 553.8324462771416 MULTI CID FTMS 0 0 0 14059 8336209.0 1.0 0 0.0 2 Unmodified _RVVDYLTKL_ ENSG00000178425|ENST00000319550|NT5DC1;ENST00000417846.2_1_6:116432031-116439170:+|nuORF;nc|ENSG00000178425|Q5TFE4-2|NT5DC1 32.037481411007896 0.1235546156350648 4 Y{I|L}TK{I|L} 5 4 55.177 0.0 0.0 4.9905 0.0 0.0 469.2654167606301 0.0 469.2654167606301 0.0 42.07834387816234 0.0 0.0 0 1.3494850021680094 0.0 0.8494850021680094 0.0 + Y{I|L}TK{I|L} 4.9905 + + 42 1 1.102 54897.3 1.0 9210 4849 14059 HBL1_DMSO_200M_050219_2,14061 HBL1_DMSO_200M_050219_2,14061,RVVDYLTKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14062 74.346 10.0 6163500.0 25 0 547720.0 + 41334 VPILAPRI 8 71 439.7947231816443 877.5748934300887 2 439.7949401736259 MULTI CID FTMS 0 0 0 14059 5047586.5 0.6261629793359834 -2 0.1917800903320312 3 Unmodified _VPILAPRI_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 46.92087301778293 0.1537303740847981 4 VP{I|L}{I|L}A[RP]{I|L} 8 0 + 66.864 0.0 0.0 7.6192 7.6192 96.571 0.0 0.0 0.0 39.41683432214104 8.231457247781648 8.231457247781648 66.86410927110798 0 0.6694451763165201 1.3979400086720375 0.0 0.3494850021680094 + + VP{I|L}{I|L}A[RP]{I|L} 7.6192 + + 66 + 1 1.102 55512.6 1.0 9211 4849 14059 HBL1_DMSO_200M_050219_2,14062 HBL1_DMSO_200M_050219_2,14062,VPILAPRI False True VPILAPRI 74.346478 439.794940173626 318753440.0 14059.0 nc|ENSG00000170540|Q15041-3|ARL6IP1;;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;;ENSG00000170540|ENST00000304414|ARL6IP1;;nc|ENSG00000170540|Q15041-2|ARL6IP1 4.033280928929647 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14063 74.348 19.0 2154400.0 25 0 510840.0 + 4070 DAMKYTIVV 9 52 520.2780580728389 1038.5415632124775 2 520.2785522341728 MULTI CID FTMS 0 0 0 14059 3058158.25 0.0669087183455874 4 -0.4012985229492187 4 Unmodified _DAMKYTIVV_ ENSG00000152234|ENST00000398752|ATP5F1A;nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A 39.94969957227396 0.0757326808254658 4 {[DA]|[EG]}MKYT{I|L}VV 9 0 + 58.069 0.0 0.0 5.5914 5.5914 87.98 0.0 0.0 0.0 15.686362358410122 42.5848728513914 15.686362358410122 23.0296449544118 0 0.8182503180159344 1.154901959985743 0.8494850021680094 0.0 + + {[DA]|[EG]}MKYT{I|L}VV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[DA]|[EG]}YT{I|L}VV;{[SA]|[TG]}{[WT]|[RM]}YT{I|L}VV 5.5914;3.3739;3.0196 +;-;- + 69 1 1.102 36325.5 1.0 9212 4849 14059 HBL1_DMSO_200M_050219_2,14063 HBL1_DMSO_200M_050219_2,14063,DAMKYTIVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14064 74.349 30.0 1398000.0 25 0 320150.0 + 14671 IIQILTNSIY 10 62 589.3431502497217 1176.6717475662433 2 589.3434326052666 MULTI CID FTMS 0 0 0 14059 2172465.0 0.6602329010979493 -5 0.4984512329101562 5 Unmodified _IIQILTNSIY_ REV__ENSG00000163827|ENST00000395905|LRRC2 1.1933415558491238 0.7211165886235917 4 N 1 -1 9.5329 0.0 0.0 0.81016 0.0 0.0 1044.619621567023 0.0 1044.619621567023 0.0 9.532891574188822 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.81016 + + 3 + 1 1.102 37846.2 1.0 9213 4849 14059 HBL1_DMSO_200M_050219_2,14064 HBL1_DMSO_200M_050219_2,14064,IIQILTNSIY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14065 74.35 54.0 1305100.0 25 0 179250.0 44267 YLLAEEPHVE 10 61 600.3010340564582 1198.5875151797163 2 600.3011962771416 MULTI CID FTMS 0 0 0 14059 890660.5625 0.5510057870697058 -1 0.1214065551757812 6 Unmodified _YLLAEEPHVE_ ENSG00000186150|ENST00000334179|UBL4B 14.838274106304384 0.5985701837916485 4 Y{I|L}YEDEV[R{I|L}] 9 7 + 77.898 0.0 0.0 6.4991 6.4991 92.29 0.0 0.0 0.0 70.90797194541551 7.064083326475128 7.064083326475128 34.49092531119419 0 0.4247425010840047 2.0 0.0 0.3807196863200844 Y{I|L}YEDEV[R{I|L}];Y{I|L}{I|L}{[WT]|[RM]}[WK][CS] 6.4991;3.6215 -;- 72 + 1 1.102 55856.4 1.0 9214 4849 14059 HBL1_DMSO_200M_050219_2,14065 HBL1_DMSO_200M_050219_2,14065,YLLAEEPHVE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14066 74.351 44.0 975230.0 25 0 103250.0 + 18374 KVPEWVDTV 9 77 536.7876595663572 1071.5607661995143 2 536.7878906130791 MULTI CID FTMS 0 0 0 14059 756756.375 0.0044351350306876 12 -1.0627593994140625 7 Unmodified _KVPEWVDTV_ ENSG00000105372|ENST00000598742|RPS19 31.26834338654808 0.1333407332142048 4 [EP]WVKVD{[TV]|[{I|L}S]} 9 4 + 48.121 0.0 0.0 4.4908 4.4908 72.142 0.0 0.0 0.0 13.454387282529794 0.5064407783890346 0.5064407783890346 3.3053000401930177 0 0.9247425010840048 1.0 0.0 0.0 [EP]WVKVD{[TV]|[{I|L}S]};[EP]WVDTVKV;[EP]WVDS{I|L}KV;[EP]WV[WR]{[TV]|[{I|L}S]};[W{M(Oxidation (M))|F}]VR[HQ]TV;{[MG]|[TS]}[HS]VKVD{[TV]|[{I|L}S]};[{I|L}P][WD]KVD{[TV]|[{I|L}S]};{[MG]|[TS]}[HS]VDTVKV;[{I|L}P][WD]DTVKV;[W{M(Oxidation (M))|F}]VR[HQ]S{I|L} 4.4908;4.1823;3.5539;2.9541;2.4827;2.3269;2.2479;2.0184;1.9395;1.8304 -;-;-;-;-;-;-;-;-;- 278 1 1.102 44587.7 1.0 9215 4849 14059 HBL1_DMSO_200M_050219_2,14066 HBL1_DMSO_200M_050219_2,14066,KVPEWVDTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14067 74.353 85.0 786370.0 25 0 72718.0 + 45943 YYYDPTTGLY 10 98 628.2793342381759 1254.5441155431515 2 628.2800170779228 MULTI CID FTMS 0 0 0 14059 670793.625 0.9105662680214772 2 -0.1661453247070312 8 Unmodified _YYYDPTTGLY_ ENSG00000003756|ENST00000347869|RBM5;ENST00000489437.1_1_3:50144918-50148299:+|nuORF 25.399314129420983 0.3980215340001851 4 YYDYYV 6 7 34.162 0.0 0.0 2.723 0.0 0.0 0.0 385.1577379398893 385.1577379398893 0.2216095870053891 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 YYDYYV 2.723 - 142 1 1.102 59344.8 1.0 9216 4849 14059 HBL1_DMSO_200M_050219_2,14067 HBL1_DMSO_200M_050219_2,14067,YYYDPTTGLY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14068 74.355 61.0 958550.0 25 0 177220.0 + 38809 TVFEGRIYV 9 79 542.2955577193986 1082.5765625055972 2 542.2957641482353 MULTI CID FTMS 0 0 0 14059 642757.375 1.0 0 0.0 9 Unmodified _TVFEGRIYV_ ENSG00000114648|ENST00000232766|KLHL18;nc|ENSG00000114648|O94889-2|KLHL18 22.736283301280096 0.2418982879461534 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}E 4 5 44.253 0.0 0.0 4.0877 0.0 0.0 0.0 603.3266044838757 603.3266044838757 32.46977283935577 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}E 4.0877 + + 85 + 1 1.102 54797.6 1.0 9217 4849 14059 HBL1_DMSO_200M_050219_2,14068 HBL1_DMSO_200M_050219_2,14068,TVFEGRIYV False True TVFEGRIYV 74.354899 542.295764148235 5254546.0 14059.0 nc|ENSG00000114648|O94889-2|KLHL18;;ENSG00000114648|ENST00000232766|KLHL18 5.070205847422282 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14069 74.356 63.0 617050.0 25 0 70564.0 -1 0 59 691.3234414692693 2070.948495008008 3 691.6592895388603 MULTI CID FTMS 0 0 0 14059 622285.25 1.0 0 0.0 10 4 P{I|L}VE[R{I|L}] 6 -1 17.625 0.0 0.0 0.85104 0.0 0.0 1345.5047043770287 0.0 1345.5047043770287 0.0 5.150312510170782 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}VE[R{I|L}] 0.85104 - 142 + 1 1.102 38996.7 1.0 9218 4849 14059 HBL1_DMSO_200M_050219_2,14069 HBL1_DMSO_200M_050219_2,14069, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14070 74.365 488.0 460320.0 25 0 38365.0 + 40119 VGLGIRAVRDR 11 177 606.3698872753153 1210.7252216174304 2 606.3701660037041 MULTI CID FTMS 0 0 0 14059 471404.625 0.3672482834826661 -5 0.4984512329101562 11 Unmodified _VGLGIRAVRDR_ REV__ENSG00000004139|ENST00000585482|SARM1;REV__nc|ENSG00000004139|Q6SZW1-2|SARM1 3.5964929083625545 0.858179447565866 4 {I|L}PSM 4 -1 23.399 0.0 0.0 1.9326 0.0 0.0 764.5037383184055 0.0 764.5037383184055 0.0 0.593610665548951 0.0 0.0 0 0.0 0.0 0.4105162882498865 0.0 {I|L}PSM 1.9326 - 356 + 1 1.102 162590.4 1.0 9219 4849 14059 HBL1_DMSO_200M_050219_2,14070 HBL1_DMSO_200M_050219_2,14070,VGLGIRAVRDR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14071 74.369 198.0 922590.0 25 0 98935.0 + 4682 DAYVLPKLYVK 11 129 654.8819054471516 1307.749257961103 2 654.8820678591728 MULTI CID FTMS 0 0 0 14059 454572.59375 0.1175067027255973 -3 0.3011550903320312 12 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 64.9267550582149 0.0491502274424461 4 {[DA]|[EG]}YV{I|L}PK{I|L}YVK 11 0 + 96.222 0.0 0.0 7.3578 7.3578 80.613 0.0 0.0 0.0 47.62843271057588 18.56547323513813 18.56547323513813 2.04119982655925 0 2.579689690656103 1.5228787452803376 0.0 0.3494850021680094 + + {[DA]|[EG]}YV{I|L}PK{I|L}YVK;{[DA]|[EG]}YV{I|L}KP{I|L}YVK;[KP]S[RK][R{M(Oxidation (M))|F}]YVQ 7.3578;7.2018;0.1474 +;-;- + 953 + 1 1.102 133304.6 1.0 9220 4849 14059 HBL1_DMSO_200M_050219_2,14071 HBL1_DMSO_200M_050219_2,14071,DAYVLPKLYVK True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14072 74.371 121.0 534890.0 25 0 94922.0 27899 PLSQDILNL 9 110 506.7874862071831 0 506.7875549197197 PEAK CID FTMS 0 0 0 14059 320426.9375 0.5228272025140588 -2 0.1917800903320312 13 Unmodified _PLSQDILNL_ ENSG00000138767|ENST00000504123|CNOT6L;ENST00000506166.1_1_4:78663390-78740391:-|nuORF 46.020951573049366 0.0425517664003206 4 {I|L}D{I|L}T 4 6 32.907 0.0 0.0 3.2531 0.0 0.0 358.22189626122287 208.07326685123283 566.2951631124557 0.0 0.0 0.0 0.0 0 0.0 0.0 1.548455006504028 0.0 {I|L}D{I|L}T 3.2531 - 226 + 1 1.102 56674.4 1.0 9221 4849 14059 HBL1_DMSO_200M_050219_2,14072 HBL1_DMSO_200M_050219_2,14072,PLSQDILNL True True GGPNTLLLQV 74.371392 506.78755491972 0.0 14059.0 nc|ENSG00000024862|Q8IWP9|CCDC28A 3.289004643758138 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14073 74.383 676.0 522180.0 25 0 99513.0 + 30417 RCCECDQSWHY 11 155 715.2606299926174 1428.5067070520347 2 715.2599975466728 MULTI CID FTMS 0 0 0 14059 298705.6875 0.7556608859256334 -1 0.1214065551757812 14 Unmodified _RCCECDQSWHY_ REV__ENSG00000141655|ENST00000586569|TNFRSF11A;REV__nc|ENSG00000141655|Q9Y6Q6-2|TNFRSF11A;REV__nc|ENSG00000141655|Q9Y6Q6-3|TNFRSF11A;REV__nc|ENSG00000141655|Q9Y6Q6-4|TNFRSF11A;REV__nc|ENSG00000141655|Q9Y6Q6-5|TNFRSF11A;REV__nc|ENSG00000141655|Q9Y6Q6-6|TNFRSF11A 10.799506525563784 0.8105043987015127 4 YYDGHM{M(Oxidation (M))|F}GNYY 11 -1 + 76.424 0.0 0.0 5.3499 5.3499 69.218 0.0 0.0 0.0 14.379628704826672 15.240317557103417 14.379628704826672 0.008954538089398 0 1.2034021960761263 2.0 1.6382104921644451 0.3807196863200844 YYDGHM{M(Oxidation (M))|F}GNYY;YYDGDD{[QG]|[NA]}GNYY;YYDGHM{M(Oxidation (M))|F}GGGYY;[YN]G[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]S{[QG]|[NA]}GNYY;YYD{[DS]|[MA]|[CV]|TT}DYYYY;YYDGH[NG]M{M(Oxidation (M))|F}YY;[MT]GYTP[C(Carbamidomethyl (C))C]GNYY;YYDG{[CT]|[{M(Oxidation (M))|F}G]}[HM]NYY;YYD{[DS]|[MA]|[CV]|TT}YDYYY;YYD{[DS]|[MA]|[CV]|TT}D[DP]NYY 5.3499;5.3493;4.4444;4.3433;4.3297;4.2232;4.13;4.0234;4.0144;4.0055 -;-;-;-;-;-;-;-;-;- 10427 1 1.102 247292.8 1.0 9222 4849 14059 HBL1_DMSO_200M_050219_2,14073 HBL1_DMSO_200M_050219_2,14073,RCCECDQSWHY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14074 74.387 196.0 343370.0 25 0 58171.0 + 17110 KLFNGTFLKA 10 103 569.8347223970067 0 569.8342162966728 PEAK CID FTMS 0 0 0 14059 181362.40625 0.7452534307280954 -2 0.1917800903320312 15 Unmodified _KLFNGTFLKA_ ENSG00000122674|ENST00000325974|CCZ1;ENSG00000146574|ENST00000316731|CCZ1B;ENST00000411858.1_1_7:6854458-6863725:-|nuORF 39.21299971606389 0.1188934111504641 4 {I|L}{M(Oxidation (M))|F}N 3 7 17.792 0.0 0.0 1.5639 0.0 0.0 128.0941751633507 632.3446138971311 760.4387890604819 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + {I|L}{M(Oxidation (M))|F}N 1.5639 + + 37 + 1 1.102 55824.6 1.0 9223 4849 14059 HBL1_DMSO_200M_050219_2,14074 HBL1_DMSO_200M_050219_2,14074,KLFNGTFLKA True True KLFNGTFLKA 74.386921 569.834216296673 2503642.75 14059.0 ENSG00000146574|ENST00000316731|CCZ1B;;ENSG00000122674|ENST00000325974|CCZ1;;ENST00000411858.1_1_7:6854458-6863725:-|nuORF 4.342280387878418 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14075 74.401 800.0 221580.0 25 0 18843.0 + 17184 KLLDDEQPLRL 11 136 670.3824952698726 1338.7504376065451 2 670.3835937380791 MULTI CID FTMS 0 0 0 14059 179191.0 1.0 0 0.0 16 Unmodified _KLLDDEQPLRL_ ENSG00000068028|ENST00000359365|RASSF1;nc|ENSG00000068028|Q9NS23-3|RASSF1;nc|ENSG00000068028|Q9NS23-4|RASSF1;nc|ENSG00000068028|Q9NS23-5|RASSF1;nc|ENSG00000068028|Q9NS23|RASSF1 106.36510571406706 0.0082195558946449 4 K{I|L}{I|L}DDEQ[{I|L}P]R{I|L} 11 0 + 112.74 0.0 0.0 8.4214 8.4214 63.599 0.0 0.0 0.0 87.25174306883702 2.6227675593548128 2.6227675593548128 0.0 0 3.385151878060192 1.0969100130080565 0.8494850021680094 0.7614393726401688 + + K{I|L}{I|L}DDEQ[{I|L}P]R{I|L};K{I|L}{I|L}DDEQR[{I|L}P]{I|L};{I|L}K{I|L}DDEQR[{I|L}P]{I|L};{I|L}K{I|L}DDEQ[{I|L}P]R{I|L};K{I|L}{I|L}DDE[AG][{I|L}P]R{I|L};K{I|L}{I|L}DDE[AG]R[{I|L}P]{I|L};K{I|L}{I|L}DDERQ[{I|L}P]{I|L};{I|L}K{I|L}DDE[AG][{I|L}P]R{I|L};{I|L}K{I|L}DDE[AG]R[{I|L}P]{I|L};K{I|L}{I|L}DREDQ[{I|L}P]{I|L} 8.4214;8.4214;8.1074;8.1074;7.7395;7.7395;7.5058;7.4256;7.4256;7.3171 +;-;-;-;-;-;-;-;-;- + 3313 + 1 1.102 135946.8 1.0 9224 4849 14059 HBL1_DMSO_200M_050219_2,14075 HBL1_DMSO_200M_050219_2,14075,KLLDDEQPLRL True True KLLDDEQPLRL 74.400759 670.383593738079 1284848.0 14059.0 ENSG00000068028|ENST00000359365|RASSF1;;nc|ENSG00000068028|Q9NS23-5|RASSF1;;nc|ENSG00000068028|Q9NS23-4|RASSF1;;nc|ENSG00000068028|Q9NS23|RASSF1;;nc|ENSG00000068028|Q9NS23-3|RASSF1 7.339174747467041 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14076 74.415 800.0 376890.0 25 0 47322.0 + 42450 VTGAGHCG 8 260 351.1539239252871 700.2932949173742 2 351.1533996462822 MULTI CID FTMS 0 0 0 14059 170394.109375 1.0 0 0.0 17 Unmodified _VTGAGHCG_ REV__ENSG00000125046|ENST00000544814|SSUH2;REV__ENST00000413305.5_1_3:8661556-8676112:-|nuORF;REV__ENST00000420394.5_1_3:8661556-8693727:-|nuORF;REV__ENST00000455157.6_1_3:8669382-8677538:-|nuORF;REV__nc|ENSG00000125046|Q9Y2M2-1|SSUH2;REV__nc|ENSG00000125046|Q9Y2M2-3|SSUH2 5.760428011301431 0.7893668129297577 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L} 4 -1 24.341 0.0 0.0 3.4758 0.0 0.0 0.0 237.0012606256469 237.0012606256469 10.845850974183335 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L} 3.4758 - 118 + 1 1.102 234598.8 0.6700000166893005 9225 4849 14059 HBL1_DMSO_200M_050219_2,14076 HBL1_DMSO_200M_050219_2,14076,VTGAGHCG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14077 74.42 225.0 306630.0 25 0 30318.0 + 25232 MVIDVLHPG 9 100 490.7646232614293 979.5146935896586 2 490.7647582888603 MULTI CID FTMS 0 0 0 14059 174157.09375 1.0 0 0.0 18 Unmodified _MVIDVLHPG_ ENSG00000138326|ENST00000372360|RPS24;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;ENST00000473603.1_1_11:33258589-33258820:+|nuORF;ENST00000478655.5_1_10:79793659-79797065:+|nuORF;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;nc|ENSG00000138326|P62847-3|RPS24;nc|ENSG00000138326|P62847-4|RPS24;nc|ENSG00000138326|P62847|RPS24 32.116972079565 0.1225432171549407 4 {[ET]|[MV]}{I|L}DV{I|L}H[PG] 9 0 + 27.381 0.0 0.0 2.7954 2.7954 73.065 0.0 0.0 0.0 9.756499699645858 3.6527926935124135 3.6527926935124135 8.688943958548375 0 0.4247425010840047 0.0 0.0 0.0 + + {[ET]|[MV]}{I|L}DV{I|L}H[PG];{[ET]|[MV]}[TA]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SV;{[ET]|[MV]}{I|L}[TA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SV;{[ET]|[MV]}[TA]{I|L}[{M(Oxidation (M))|F}V]TV;{[ET]|[MV]}{I|L}[TA][{M(Oxidation (M))|F}V]TV;{[ET]|[MV]}{I|L}DV[HV][PA];{[ET]|[MV]}[TA]{I|L}[{M(Oxidation (M))|F}V]S{I|L};{[ET]|[MV]}{I|L}[TA][{M(Oxidation (M))|F}V]S{I|L};[NP][RP][TA]{I|L}[DP];[NP][RP]{I|L}[TA][DP] 2.7954;1.9083;1.9083;0.95702;0.95702;0.92781;0.56072;0.56072;0.43257;0.43257 +;-;-;-;-;-;-;-;-;- + 181 + 1 1.102 57069.9 1.0 9226 4849 14059 HBL1_DMSO_200M_050219_2,14077 HBL1_DMSO_200M_050219_2,14077,MVIDVLHPG True True MVIDVLHPG 74.419994 490.76475828886 1740297.75 14059.0 ENST00000478655.5_1_10:79793659-79797065:+|nuORF;;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;;ENSG00000138326|ENST00000372360|RPS24;;nc|ENSG00000138326|P62847|RPS24;;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;;ENST00000473603.1_1_11:33258589-33258820:+|nuORF;;nc|ENSG00000138326|P62847-4|RPS24;;nc|ENSG00000138326|P62847-3|RPS24 5.068467458089192 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14078 74.425 287.0 514270.0 25 0 52560.0 + 35801 SVISIMKPV 9 149 487.2911486678975 972.567744402595 2 487.2913390994072 MULTI CID FTMS 0 0 0 14059 169953.1875 1.0 0 0.0 19 Unmodified _SVISIMKPV_ ENSG00000127481|ENST00000375254|UBR4;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4 43.85829265575387 0.0542763391141878 4 [{I|L}T]KM{I|L}S 6 7 30.609 0.0 0.0 3.1472 0.0 0.0 0.0 296.168584147835 296.168584147835 6.88039076304328 0.0 0.0 0.0 0 0.5994850021680094 0.6989700043360187 0.0 0.0 [{I|L}T]KM{I|L}S 3.1472 - 893 1 1.102 115634.0 1.0 9227 4849 14059 HBL1_DMSO_200M_050219_2,14078 HBL1_DMSO_200M_050219_2,14078,SVISIMKPV True True SVISIMKPV 74.425259 487.291339099407 1659766.5 14059.0 ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;ENST00000419533.1_1_1:19477984-19504233:-|nuORF;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4 6.211448351542155 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14079 74.439 800.0 191620.0 25 0 37126.0 -1 CDDFDFCETCF 11 150 729.7391418707948 1457.4637308083895 2 730.2410766482353 MULTI CID FTMS 0 0 0 14059 154329.078125 0.6612866683101093 -1 0.1214065551757812 20 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))DDFDFCETC(Carbamidomethyl (C))F_ ENSG00000128731|ENST00000261609|HERC2;ENST00000567869.1_1_15:28436080-28447805:-|nuORF 1.3295316138638542 0.8688751186870782 4 YYDY 4 -1 24.655 0.0 0.0 1.6916 0.0 0.0 343.12963092352726 507.0959261529906 850.2255570765179 0.0 0.0 0.0 0.0 0 0.0 0.0 1.174742501084005 0.0 YYDY 1.6916 - 572 + 1 1.102 109496.0 0.7900000214576721 9228 4849 14059 HBL1_DMSO_200M_050219_2,14079 HBL1_DMSO_200M_050219_2,14079,CDDFDFCETCF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14081 74.444 12.0 4704100.0 25 0 709980.0 + 26553 NVIQTVPNL 9 85 499.2876224784988 0 499.2876159548759 PEAK CID FTMS 0 0 0 14080 1833900.75 0.4561463040356022 1 -0.0666046142578125 1 Unmodified _NVIQTVPNL_ ENSG00000196510|ENST00000455511|ANAPC7;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 46.020951573049366 0.0425517664003206 4 {I|L}VVPN 5 5 17.3 0.0 0.0 1.736 0.0 0.0 343.1481686857101 128.07207666568596 471.2202453513961 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.6861818737241735 {I|L}VVPN 1.736 - 106 + 1 1.11 50062.7 1.0 9229 4850 14080 HBL1_DMSO_200M_050219_2,14081 HBL1_DMSO_200M_050219_2,14081,NVIQTVPNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14082 74.445 32.0 2102900.0 25 0 301570.0 + 22135 LPPQPKVK 8 63 453.7924634572879 0 453.7922851443291 PEAK CID FTMS 0 0 0 14080 1666045.5 0.0513686599053461 16 -1.4263763427734375 2 Unmodified _LPPQPKVK_ REV__ENSG00000204463|ENST00000676615|BAG6;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6 26.34127834903884 0.298120260672589 4 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 6 -1 25.947 0.0 0.0 2.8653 0.0 0.0 113.0836830004742 66.03571497134999 179.11939797182418 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.4247425010840047 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 2.8653 - 37 + 1 1.11 56991.6 1.0 9230 4850 14080 HBL1_DMSO_200M_050219_2,14082 HBL1_DMSO_200M_050219_2,14082,LPPQPKVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14083 74.446 9.6 6768900.0 25 0 1024600.0 + + 43555 LPHDPSFAI 9 92 498.7619725472946 995.5093921613892 2 498.7616149783134 MULTI CID FTMS 0 0 0 14080 3927771.25 0.9812935641456222 -1 0.0995407104492187 3 Unmodified _WYLSPFAL_ ENSG00000171320|ENST00000305188|ESCO2;nc|ENSG00000171320|Q56NI9-2|ESCO2 34.18733598223924 0.3315367612694167 4 [HD]PS{M(Oxidation (M))|F}P{I|L}A{I|L} 9 -1 + 54.447 0.0 0.0 5.4693 5.4693 72.034 0.0 0.0 0.0 4.259687322722812 16.478174818886373 4.259687322722812 1.2371250542002343 0 0.8494850021680094 0.0 0.6109243748081782 0.0 [HD]PS{M(Oxidation (M))|F}P{I|L}A{I|L};[HD]PS{M(Oxidation (M))|F}PA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DS{M(Oxidation (M))|F}P{I|L}A{I|L};[WY]S{M(Oxidation (M))|F}P{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}[HD]P{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DS{M(Oxidation (M))|F}PA{I|L}{I|L};[WY]S{M(Oxidation (M))|F}PA{I|L}{I|L};[{I|L}A]{M(Oxidation (M))|F}[HD]PA{I|L}{I|L};[HD]PS{M(Oxidation (M))|F}AP{I|L}{I|L};[{I|L}A]{M(Oxidation (M))|F}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}A{I|L} 5.4693;5.345;5.0414;5.0352;5.0085;4.9171;4.9109;4.8842;4.6429;4.4037 -;-;-;-;-;-;-;-;-;- 699 1 1.11 55304.8 1.0 9231 4850 14080 HBL1_DMSO_200M_050219_2,14083 HBL1_DMSO_200M_050219_2,14083,WYLSPFAL False False LPHDPSFAI 74.446009 498.761614978313 33871904.0 14080.0 ENSG00000171320|ENST00000305188|ESCO2;;nc|ENSG00000171320|Q56NI9-2|ESCO2 2.691585659980774 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14084 74.447 32.0 2180300.0 25 0 318750.0 + 18787 LAPLAKVI 8 77 412.7839663047197 823.5533796762394 2 412.7838012576103 MULTI CID FTMS 0 0 0 14080 1886861.375 0.3590880501199665 -3 0.29132080078125 4 Unmodified _LAPLAKVI_ ENSG00000105679|ENST00000222286|GAPDHS;ENSG00000111640|ENST00000229239|GAPDH;ENST00000423411.2_1_6:135940529-135940997:-|nuORF;ENST00000455134.1_1_10:93426952-93427153:-|nuORF;ENST00000515281.1_1_11:88141588-88141981:-|nuORF;nc|ENSG00000111640|P04406-2|GAPDH 40.44857923139169 0.2267865117615937 4 [{I|L}A]P{I|L}AKV{I|L} 8 0 + 66.592 0.0 0.0 8.0859 8.0859 89.735 0.0 0.0 0.0 21.898962788844827 7.533276666586119 7.533276666586119 7.533276666586119 0 0.9247425010840048 2.0 0.0 0.0 + + [{I|L}A]P{I|L}AKV{I|L};[{I|L}A]P{I|L}AK{I|L}V;[{I|L}A]P{I|L}A{I|L}KV;[{I|L}A]{I|L}PAKV{I|L};[{I|L}A]{I|L}PAK{I|L}V;[{I|L}A]{I|L}PA{I|L}KV 8.0859;7.1712;7.0032;6.63;5.7153;5.5474 +;-;-;-;-;- + 219 + 1 1.11 57151.5 1.0 9232 4850 14080 HBL1_DMSO_200M_050219_2,14084 HBL1_DMSO_200M_050219_2,14084,LAPLAKVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14085 74.448 20.0 2379500.0 25 0 149270.0 + 24880 MPNENIPEL 9 71 528.7558653842937 1055.4971778353872 2 528.7559692263603 MULTI CID FTMS 0 0 0 14080 1679979.0 1.0 0 0.0 5 Unmodified _MPNENIPEL_ ENSG00000115216|ENST00000379852|NRBP1;ENST00000460499.5_1_2:27659579-27664676:+|nuORF 24.020572477871973 0.2255576514309169 4 [EP]NNM{I|L} 6 5 43.689 0.0 0.0 4.1392 0.0 0.0 0.0 354.16635080832515 354.16635080832515 24.048246627886986 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.6549471895720984 [EP]NNM{I|L} 4.1392 - 239 1 1.11 46587.6 1.0 9233 4850 14080 HBL1_DMSO_200M_050219_2,14085 HBL1_DMSO_200M_050219_2,14085,MPNENIPEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14086 74.45 55.0 1179300.0 25 0 234380.0 29929 QSLEKPEL 8 82 472.2586606002652 942.5027682673305 2 472.2585937380791 MULTI CID FTMS 0 0 0 14080 831148.75 0.0456546200688377 -4 0.40069580078125 6 Unmodified _QSLEKPEL_ ENSG00000130270|ENST00000310127|ATP8B3;nc|ENSG00000130270|O60423-1|ATP8B3;nc|ENSG00000130270|O60423-3|ATP8B3 28.486842064014134 0.4448922141344407 4 [EP]{I|L}D{I|L} 5 6 29.922 0.0 0.0 3.1747 0.0 0.0 0.0 372.1768765039116 372.1768765039116 2.98332479720628 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [EP]{I|L}D{I|L} 3.1747 - 157 1 1.11 55801.7 1.0 9234 4850 14080 HBL1_DMSO_200M_050219_2,14086 HBL1_DMSO_200M_050219_2,14086,QSLEKPEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14087 74.451 64.0 1567100.0 25 0 145240.0 + 4686 DAYVLPKLYVK 11 95 436.9237660453603 1307.749468736281 3 436.9239074587822 MULTI CID FTMS 0 0 0 14080 792657.4375 0.2850908359972492 -4 0.40069580078125 7 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 40.23920728925047 0.2087110615831976 4 {[DA]|[EG]}YV{I|L}PK{I|L}YVK 11 0 + 74.659 0.0 0.0 5.709 5.709 90.173 0.0 0.0 0.0 42.97700154368136 11.757289933785174 11.757289933785174 74.65943919160557 0 0.3494850021680094 2.0 0.0 0.2887254899964357 + + {[DA]|[EG]}YV{I|L}PK{I|L}YVK 5.709 + + 203 + 1 1.11 84987.4 1.0 9235 4850 14080 HBL1_DMSO_200M_050219_2,14087 HBL1_DMSO_200M_050219_2,14087,DAYVLPKLYVK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14088 74.453 57.0 1071400.0 25 0 160970.0 5474 DLRRRLCSI 9 72 566.3221500012316 1130.6297470692632 2 566.3222534060478 MULTI CID FTMS 0 0 0 14080 741680.8125 0.8008477982020815 -4 0.40069580078125 8 Unmodified _DLRRRLCSI_ ENST00000473234.1_1_14:96783570-96789065:-|nuORF 4.75600775471527 0.7486543447549536 4 {I|L} 1 8 3.9794 0.0 0.0 0.35196 0.0 0.0 438.1941774146711 576.3278902643186 1014.5220676789896 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.35196 + + 22 + 1 1.11 50630.8 1.0 9236 4850 14080 HBL1_DMSO_200M_050219_2,14088 HBL1_DMSO_200M_050219_2,14088,DLRRRLCSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14089 74.454 69.0 1082500.0 25 0 229680.0 + 4569 DAYRMLSRL 9 72 562.7972596150311 1123.579966296862 2 562.7979614138603 MULTI CID FTMS 0 0 0 14080 693810.625 0.5205462763654752 1 -0.0666046142578125 9 Unmodified _DAYRMLSRL_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 15.248480904072842 0.4239247793462406 4 {I|L}D 2 8 24.776 0.0 0.0 2.2051 0.0 0.0 0.0 892.4454523249389 892.4454523249389 2.1002345915110965 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}D 2.2051 - 25 + 1 1.11 61723.7 1.0 9237 4850 14080 HBL1_DMSO_200M_050219_2,14089 HBL1_DMSO_200M_050219_2,14089,DAYRMLSRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14090 74.456 59.0 1048000.0 25 0 137200.0 + 44515 YPDGRIIMV 9 88 532.2838664939519 1062.5531800547035 2 532.2834350466728 MULTI CID FTMS 0 0 0 14080 648021.125 0.3428328124216764 4 -0.3371734619140625 10 Unmodified _YPDGRIIMV_ ENSG00000141446|ENST00000269214|ESCO1 34.93206674587334 0.1032771302489716 4 YPD 3 6 44.737 0.0 0.0 4.2103 0.0 0.0 0.0 684.3872597171046 684.3872597171046 10.43250979113764 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 + YPD 4.2103 + + 99 + 1 1.11 54210.3 1.0 9238 4850 14080 HBL1_DMSO_200M_050219_2,14090 HBL1_DMSO_200M_050219_2,14090,YPDGRIIMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14091 74.458 96.0 498370.0 25 0 81886.0 43643 YAMKVLRKVS 10 75 597.8564034796636 1193.6982540261272 2 597.8567382693291 MULTI CID FTMS 0 0 0 14080 640866.9375 0.4322656425936838 -4 0.40069580078125 11 Unmodified _YAMKVLRKVS_ ENST00000525088.5_1_11:67196543-67197168:+|nuORF 3.944395688203298 0.708391353636983 4 V 1 9 9.3323 0.0 0.0 0.7818 0.0 0.0 1076.6190665645045 0.0 1076.6190665645045 0.0 8.363205328068348 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.7818 + + 13 + 1 1.11 40658.2 1.0 9239 4850 14080 HBL1_DMSO_200M_050219_2,14091 HBL1_DMSO_200M_050219_2,14091,YAMKVLRKVS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14092 74.461 139.0 688310.0 25 0 99859.0 + 45737 YYIDCIRQV 9 90 586.7921202112501 1171.5696874893 2 586.7921020388603 MULTI CID FTMS 0 0 0 14080 357437.78125 0.3789257612201095 -2 0.220947265625 12 Unmodified _YYIDCIRQV_ ENSG00000169710|ENST00000306749|FASN 34.40172386719151 0.1061884637610825 4 YY{I|L}DC{I|L}[RN]{I|L} 9 2 + 75.322 0.0 0.0 6.4291 6.4291 79.301 0.0 0.0 0.0 41.42065152999547 8.42261388523842 8.42261388523842 3.0102999566398125 0 0.4247425010840047 2.0 0.0 0.9247425010840048 YY{I|L}DC{I|L}[RN]{I|L};YYVEC{I|L}[RN]{I|L};YY{I|L}V[EC][RN]{I|L};YYV{I|L}[EC][RN]{I|L};YVYEC{I|L}[RN]{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}{I|L}EY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};YVY{I|L}[EC][RN]{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{[QN]|[E{I|L}]|[KN]}{I|L}Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.4291;6.1722;4.3872;4.1302;4.1025;2.5265;2.0606;1.8281 -;-;-;-;-;-;-;- 319 + 1 1.11 79901.9 1.0 9240 4850 14080 HBL1_DMSO_200M_050219_2,14092 HBL1_DMSO_200M_050219_2,14092,YYIDCIRQV True True YYIDCIRQV 74.460796 586.79210203886 15567805.0 14080.0 ENSG00000169710|ENST00000306749|FASN 5.625846068064372 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14093 74.465 213.0 541210.0 25 0 62496.0 -1 0 103 938.434285612022 1874.854018290844 2 938.4354736208916 MULTI CID FTMS 0 0 0 14080 302946.0 0.7125491122492826 -2 0.220947265625 13 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QNA{M(Oxidation (M))|F}YQV{[QV]|[N{I|L}]|[RA]|[KV]} 15 -1 + 84.112 0.0 0.0 4.4863 4.4863 50.481 0.0 0.0 0.0 4.412866224577243 7.61760834195475 4.412866224577243 0.0 0 0.9005149978319906 1.5228787452803376 0.5796896906561032 1.524227503252014 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QNA{M(Oxidation (M))|F}YQV{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QNA{M(Oxidation (M))|F}YKV{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}V]C(Carbamidomethyl (C)){M(Oxidation (M))|F}QNA{M(Oxidation (M))|F}YKV{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}V]C(Carbamidomethyl (C)){M(Oxidation (M))|F}QNA{M(Oxidation (M))|F}YQV{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YQV{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YKV{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}V]C(Carbamidomethyl (C)){[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}QNA{M(Oxidation (M))|F}YQV{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}V]C(Carbamidomethyl (C)){[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}QNA{M(Oxidation (M))|F}YKV{[QV]|[N{I|L}]|[RA]|[KV]};[YQ]V[CS]AQQNA{M(Oxidation (M))|F}YKV{[QV]|[N{I|L}]|[RA]|[KV]};[YQ]V[CS]AQQNA{M(Oxidation (M))|F}YQV{[QV]|[N{I|L}]|[RA]|[KV]} 4.4863;4.4863;4.3847;4.3847;4.251;4.251;4.1636;4.1636;4.1326;4.1326 -;-;-;-;-;-;-;-;-;- 6870 1 1.11 78270.7 1.0 9241 4850 14080 HBL1_DMSO_200M_050219_2,14093 HBL1_DMSO_200M_050219_2,14093, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14094 74.476 664.0 196940.0 25 0 12832.0 + 31992 RVFTEANLVSV 11 128 617.84359607149 1233.6726392097798 2 617.8441650271416 MULTI CID FTMS 0 0 0 14080 296007.4375 0.3468887802610009 2 -0.1522216796875 14 Unmodified _RVFTEANLVSV_ ENSG00000112159|ENST00000369393|MDN1 28.270515756011903 0.428402293028943 4 [VS]{I|L}[W{M(Oxidation (M))|F}]AN{I|L}VSV 11 4 + 58.934 0.0 0.0 4.7772 4.7772 78.718 0.0 0.0 0.0 3.880205790433864 35.997538943270726 3.880205790433864 8.058784260107302 0 0.9709587969248012 1.5228787452803376 0.0 0.6505149978319906 [VS]{I|L}[W{M(Oxidation (M))|F}]AN{I|L}VSV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[NV]|[RG]}[KS]N{I|L}VW;{[TV]|[{I|L}S]}V[W{M(Oxidation (M))|F}]AN{I|L}VSV;[{I|L}V]S[W{M(Oxidation (M))|F}]AN{I|L}VSV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[NV]|[RG]}D[{I|L}T]{I|L}VW;[{I|L}V][{M(Oxidation (M))|F}E][KS]N{I|L}VW;[VS]{I|L}[W{M(Oxidation (M))|F}]AGG{I|L}VSV;{[CT]|[{M(Oxidation (M))|F}G]}V{I|L}N[KS]{[QG]|[NA]}VSV;{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}V][KS]N{I|L}VW;[VS]V[WQ]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}VSV 4.7772;4.1239;3.7729;3.6785;3.6359;3.5643;3.5099;3.4668;3.4657;3.1931 -;-;-;-;-;-;-;-;-;- 901 1 1.11 99659.8 1.0 9242 4850 14080 HBL1_DMSO_200M_050219_2,14094 HBL1_DMSO_200M_050219_2,14094,RVFTEANLVSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14095 74.479 109.0 498200.0 25 0 48570.0 + 26969 PEEKPPASL 9 84 484.2583831501523 966.5022133671048 2 484.2584106326103 MULTI CID FTMS 0 0 0 14080 274385.0 0.0007806911948515 68 -6.770675659179688 15 Unmodified _PEEKPPASL_ ENSG00000198597|ENST00000355537|ZNF536 14.838274106304384 0.4350285940865338 4 {I|L}CTV 4 9 29.469 0.0 0.0 3.049 0.0 0.0 532.2853382223766 0.0 532.2853382223766 0.0 16.704824754556533 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}CTV 3.049 - 103 + 1 1.11 47927.8 1.0 9243 4850 14080 HBL1_DMSO_200M_050219_2,14095 HBL1_DMSO_200M_050219_2,14095,PEEKPPASL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14096 74.491 703.0 397270.0 25 0 23065.0 + 17787 KQIQEDWEL 9 208 594.7985320700891 1187.582511206978 2 594.7978393435478 MULTI CID FTMS 0 0 0 14080 272170.46875 0.3660681966780952 -2 0.220947265625 16 Unmodified _KQIQEDWEL_ ENSG00000154710|ENST00000284957|RABGEF1;nc|ENSG00000154710|Q9UJ41-3|RABGEF1;nc|ENSG00000154710|Q9UJ41-4|RABGEF1 111.28704002717404 0.0050101734347035 4 [Q{I|L}]KQEDWE{I|L} 9 2 + 98.546 0.0 0.0 8.298 8.298 85.927 0.0 0.0 0.0 3.917191763309432 16.478174818886373 3.917191763309432 3.917191763309432 0 0.6747425010840047 0.585026652029182 1.4361818737241734 1.998233835905417 [Q{I|L}]KQEDWE{I|L};[AG]K{I|L}QEDWE{I|L};[AG]{I|L}KQEDWE{I|L};[KQ]{I|L}QEDWE{I|L};[Q{I|L}]K[AG]EDWE{I|L};[AG]K{I|L}[AG]EDWE{I|L};[AG]{I|L}K[AG]EDWE{I|L};{[QN]|[E{I|L}]|[KN]}[RV]EDWE{I|L};[KQ]{I|L}[AG]EDWE{I|L};{[QN]|[E{I|L}]|[KN]}[RV]EDEGE{I|L} 8.298;7.9682;7.8522;7.7195;7.5226;7.1965;7.0805;7.0772;6.9442;6.9156 -;-;-;+;-;-;-;-;-;- + 9277 1 1.11 202077.2 1.0 9244 4850 14080 HBL1_DMSO_200M_050219_2,14096 HBL1_DMSO_200M_050219_2,14096,KQIQEDWEL True True KQIQEDWEL 74.49095 594.797839343548 7295697.0 14080.0 nc|ENSG00000154710|Q9UJ41-3|RABGEF1;;nc|ENSG00000154710|Q9UJ41-4|RABGEF1;;ENSG00000154710|ENST00000284957|RABGEF1 6.464999357859294 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14097 74.492 60.0 1135700.0 25 0 153790.0 + 25241 MVMETIEKI 9 98 547.2861803226949 1092.5578077121895 2 547.2864868044853 MULTI CID FTMS 0 0 0 14080 254996.0 0.2532453622939672 -2 0.220947265625 17 Unmodified _MVMETIEKI_ ENSG00000115524|ENST00000335508|SF3B1 24.99096001346401 0.2132109383330889 4 MVMET{I|L}EK{I|L} 9 0 + 67.468 0.0 0.0 6.1753 6.1753 89.324 0.0 0.0 0.0 49.88248136669075 8.197859905088634 8.197859905088634 15.934598195660442 0 0.6677353201839438 2.0 0.3252574989159953 0.0 + + MVMET{I|L}EK{I|L};MVMET{I|L}{[VA]|[{I|L}G]}TV;MVMET{I|L}[{I|L}A]SV;MVMET{I|L}{[VA]|[{I|L}G]}S{I|L};[QT]N{M(Oxidation (M))|F}T{I|L}EK{I|L};M[{I|L}A][{M(Oxidation (M))|F}E]{I|L}EK{I|L};[QT]N{M(Oxidation (M))|F}T{I|L}{[VA]|[{I|L}G]}TV;[QT]N{M(Oxidation (M))|F}T{I|L}[{I|L}A]SV;[QT]N{M(Oxidation (M))|F}T{I|L}{[VA]|[{I|L}G]}S{I|L};[{M(Oxidation (M))|F}T][K{I|L}]MEEPV 6.1753;4.7168;4.6927;4.6671;2.8351;2.0173;1.3767;1.3526;1.3269;0.12622 +;-;-;-;-;-;-;-;-;- + 341 + 1 1.11 56895.4 1.0 9245 4850 14080 HBL1_DMSO_200M_050219_2,14097 HBL1_DMSO_200M_050219_2,14097,MVMETIEKI False True MVMETIEKI 74.492446 547.286486804485 16385274.0 14080.0 ENSG00000115524|ENST00000335508|SF3B1 5.973589420318604 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14098 74.495 148.0 470280.0 25 0 36282.0 + + 43851 FYISPRSTF 9 87 559.2868881209525 1116.559223308705 2 559.2869140505791 MULTI CID FTMS 0 0 0 14080 254155.625 0.7646719020134435 1 -0.0666046142578125 18 Unmodified _YFIRDGFLS_ nc|ENSG00000101336|P08631-3|HCK;nc|ENSG00000101336|P08631-4|HCK;ENSG00000101336|ENST00000375852|HCK;nc|ENSG00000101336|P08631-2|HCK 20.453626601364224 0.2830276176381075 4 {M(Oxidation (M))|F}Y{I|L}SP[YQ]S{I|L} 9 -1 + 46.719 0.0 0.0 4.1842 4.1842 66.505 0.0 0.0 0.0 5.220935723628806 1.0473535052001282 1.0473535052001282 1.0473535052001282 0 0.4247425010840047 0.0 0.7302046884880937 0.0 {M(Oxidation (M))|F}Y{I|L}SP[YQ]S{I|L};{M(Oxidation (M))|F}Y{I|L}SP[YQ]TV;[Y{M(Oxidation (M))|F}][KA]PS{I|L}YE;[Y{M(Oxidation (M))|F}][KA]PS[NP]{[HG]|PP};HH[HV]P[YQ]S{I|L};HH[HV]P[YQ]TV;[Y{M(Oxidation (M))|F}][KA]P[HV]QQ 4.1842;4.0904;3.0137;1.2271;0.37377;0.27997;0.031537 -;-;-;-;-;-;- 107 + 1 1.11 59924.9 1.0 9246 4850 14080 HBL1_DMSO_200M_050219_2,14098 HBL1_DMSO_200M_050219_2,14098,YFIRDGFLS False False FYISPRSTF 74.49541 559.286914050579 2814176.0 14080.0 nc|ENSG00000101336|P08631-3|HCK;;nc|ENSG00000101336|P08631-4|HCK;;ENSG00000101336|ENST00000375852|HCK;;nc|ENSG00000101336|P08631-2|HCK 1.043696830670039 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14099 74.501 280.0 384210.0 25 0 41896.0 14993 ILRMERII 8 117 348.5505082083792 1042.6296952253376 3 348.5498840212822 MULTI CID FTMS 0 0 0 14080 225721.484375 0.0405779067720992 4 -0.3371734619140625 19 Unmodified _ILRMERII_ ENSG00000118816|ENST00000237654|CCNI;nc|ENSG00000118816|Q14094-2|CCNI 17.11289562659939 0.6581031263288403 4 {I|L}{I|L}E 3 5 34.157 0.0 0.0 3.276 0.0 0.0 0.0 684.3965191937405 684.3965191937405 21.05774396488272 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.0 {I|L}{I|L}E 3.276 - 37 + 1 1.11 93631.5 1.0 9247 4850 14080 HBL1_DMSO_200M_050219_2,14099 HBL1_DMSO_200M_050219_2,14099,ILRMERII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14100 74.506 201.0 315850.0 25 0 33144.0 + -1 LGVGLCAQV 9 111 458.74976789538186 915.4849828575638 2 458.7500182986259 MULTI CID FTMS 0 0 0 14080 209702.640625 0.3717010726595989 3 -0.3017578125 20 Carbamidomethyl (C) _LGVGLC(Carbamidomethyl (C))AQV_ REV__ENST00000485978.1_1_9:136337145-136339092:-|nuORF 32.116972079565 0.1225432171549407 4 AN{I|L} 3 -1 23.672 0.0 0.0 2.5857 0.0 0.0 599.3104050761169 0.0 599.3104050761169 0.0 10.573193899842437 0.0 0.0 0 0.0 0.0 0.0 1.0 AN{I|L} 2.5857 - 192 + 1 1.11 51292.0 1.0 9248 4850 14080 HBL1_DMSO_200M_050219_2,14100 HBL1_DMSO_200M_050219_2,14100,LGVGLCAQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14102 74.51 10.0 6658500.0 25 0 1867600.0 + 45700 YYDGDIGNYYY 11 74 703.2825654179 1404.5505779025998 2 703.2835571169853 MULTI CID FTMS 0 0 0 14101 7607964.0 1.0 0 0.0 1 Unmodified _YYDGDIGNYYY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 60.07390631473393 0.0688452368411198 4 YYDGDY{[VA]|[{I|L}G]}NYY 11 2 + 61.973 0.0 0.0 4.4123 4.4123 67.628 0.0 0.0 0.0 19.50318762307696 10.550088832413527 10.550088832413527 1.2062907165159231 0 0.7429928190999391 2.0 1.5114393726401687 0.0 YYDGDY{[VA]|[{I|L}G]}NYY;YYDGD{I|L}[NG]YYY;YYDGD{I|L}[YG]NYY;YYDGDY{[VA]|[{I|L}G]}GGYY;YYDGD{I|L}[YG]GGYY;{[YD]|[{M(Oxidation (M))|F}M]}GDYY{[VA]|[{I|L}G]}NYY;{[YD]|[{M(Oxidation (M))|F}M]}GDY{I|L}[NG]YYY;{[YD]|[{M(Oxidation (M))|F}M]}GDY{[{M(Oxidation (M))|F}H]|[RQ]}YYY;{[YD]|[{M(Oxidation (M))|F}M]}YGDY{[VA]|[{I|L}G]}NYY;{[YD]|[{M(Oxidation (M))|F}M]}GDYY{[{M(Oxidation (M))|F}H]|[RQ]}YY 4.4123;4.3264;3.8411;3.7624;3.1911;3.0238;2.9379;2.8094;2.7741;2.7699 -;+;-;-;-;-;-;-;-;- + 1405 1 1.11 58092.9 1.0 9249 4851 14101 HBL1_DMSO_200M_050219_2,14102 HBL1_DMSO_200M_050219_2,14102,YYDGDIGNYYY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14103 74.511 38.0 1326400.0 25 0 188550.0 43155 VYQIAIVHYI 10 61 609.8459086152881 1217.677264297376 2 609.8460571169853 MULTI CID FTMS 0 0 0 14101 1017181.0625 0.4264317848936075 2 -0.2351531982421875 2 Unmodified _VYQIAIVHYI_ ENST00000407347.2_1_6:18367150-18368330:-|nuORF 20.453626601364224 0.5043500229302764 4 {I|L}EQVY{I|L} 6 6 50.539 0.0 0.0 4.1504 0.0 0.0 454.2645436017594 0.0 454.2645436017594 0.0 39.56969254788858 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.0 {I|L}EQVY{I|L} 4.1504 - 50 1 1.11 46957.6 1.0 9250 4851 14101 HBL1_DMSO_200M_050219_2,14103 HBL1_DMSO_200M_050219_2,14103,VYQIAIVHYI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14104 74.513 18.0 5329600.0 25 0 333990.0 + 18209 KVFDPVPVGV 10 111 528.808343148584 1055.6021333639678 2 528.8081542849541 MULTI CID FTMS 0 0 0 14101 2420612.0 0.473599724520736 -3 0.2875518798828125 3 Unmodified _KVFDPVPVGV_ ENSG00000135829|ENST00000367549|DHX9;ENST00000490519.1_1_1:182845328-182845691:+|nuORF 34.93206674587334 0.2110832994570416 4 [VP]D{M(Oxidation (M))|F}KVPVGV 10 4 + 62.317 0.0 0.0 5.9035 5.9035 86.495 0.0 0.0 0.0 9.87888070366388 16.53212513775344 9.87888070366388 9.87888070366388 0 1.5994850021680094 1.5228787452803376 0.25 0.0 [VP]D{M(Oxidation (M))|F}KVPVGV;{[QV]|[N{I|L}]|[RA]|[KV]}[YV]PVPVGV;[VP]D{M(Oxidation (M))|F}KVG[VP]V;[VP]KV{M(Oxidation (M))|F}DPVGV;[VG]A[YV]PVPVGV;[TP][YK]PVPVGV;{[QV]|[N{I|L}]|[RA]|[KV]}[YV]PVG[VP]V;{[QN]|[E{I|L}]|[KN]}{[ES]|[DT]|[{I|L}C]}KVPVGV;{[QN]|[E{I|L}]|[KN]}KDTVPVGV;[TP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVPVGV 5.9035;4.9676;4.6522;4.6509;4.6432;3.8252;3.7164;3.6151;3.5992;3.54 -;-;-;-;-;-;-;-;-;- 605 1 1.11 85923.3 1.0 9251 4851 14101 HBL1_DMSO_200M_050219_2,14104 HBL1_DMSO_200M_050219_2,14104,KVFDPVPVGV False True KVFDPVPVGV 74.512606 528.808154284954 96711616.0 14101.0 ENST00000490519.1_1_1:182845328-182845691:+|nuORF;;ENSG00000135829|ENST00000367549|DHX9 7.405231793721517 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14105 74.514 49.0 1401300.0 25 0 133360.0 + + -1 HLIPDAPEL 9 84 502.2769034436342 1002.5392539540684 2 502.7744628787041 MULTI CID FTMS 0 0 0 14101 913838.25 0.8334217974727528 6 -0.5657958984375 4 Carbamidomethyl (C) _IKDLLEC(Carbamidomethyl (C))L_ ENSG00000129083|ENST00000439561|COPB1 13.50788311687929 0.7113601687236069 4 [EP]GH{I|L}{I|L} 6 -1 36.661 0.0 0.0 3.6568 0.0 0.0 0.0 353.1714724376466 353.1714724376466 18.780221703767307 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.0 [EP]GH{I|L}{I|L} 3.6568 - 165 1 1.11 57606.2 1.0 9252 4851 14101 HBL1_DMSO_200M_050219_2,14105 HBL1_DMSO_200M_050219_2,14105,IKDLLECL False False HLIPDAPEL 74.513902 502.774462878704 24614248.0 14101.0 ENSG00000129083|ENST00000439561|COPB1 5.135726769765218 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14106 74.517 179.0 782330.0 25 0 128020.0 + 24713 MPALAPPEV 9 112 462.74671321944055 923.4788735056812 2 462.7468139529228 MULTI CID FTMS 0 0 0 14101 788534.8125 0.631427706321005 2 -0.2351531982421875 5 Unmodified _MPALAPPEV_ ENSG00000132341|ENST00000543796|RAN;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 56.541270873467816 0.0279970378729908 4 [PA]{I|L}AMP[EP]V 9 2 + 46.409 0.0 0.0 5.0255 5.0255 71.176 0.0 0.0 0.0 8.037523312715123 14.264771768807591 8.037523312715123 1.7609125905568137 0 1.1549471895720984 0.6777807052660807 0.0 0.0 [PA]{I|L}AMP[EP]V;[PA]{I|L}MAP[EP]V;[PA]M{I|L}AP[EP]V;[PA]MA{I|L}P[EP]V;{NN|[MP]|[D{I|L}]|[EV]}A{I|L}AP[EP]V;[PA]A{I|L}MP[EP]V;{NN|[MP]|[D{I|L}]|[EV]}AA{I|L}P[EP]V;[PA]{I|L}APM[EP]V;[PA]AM{I|L}P[EP]V;[{I|L}P]AAMP[EP]V 5.0255;4.8348;4.6441;4.4039;4.1551;4.1452;3.9149;3.7229;3.7143;3.6805 -;-;-;-;+;-;-;-;-;- + 506 1 1.11 112138.1 1.0 9253 4851 14101 HBL1_DMSO_200M_050219_2,14106 HBL1_DMSO_200M_050219_2,14106,MPALAPPEV True True MPALAPPEV 74.517371 462.746813952923 15799241.0 14101.0 ENST00000455094.1_1_6:30454046-30454364:+|nuORF;;ENSG00000132341|ENST00000543796|RAN 1.7732834219932556 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14107 74.519 69.0 1017100.0 25 0 142970.0 + 36976 TFGERVVAF 9 91 513.2745626602658 1024.5345723873315 2 513.2746459841728 MULTI CID FTMS 0 0 0 14101 712208.4375 0.8641550965299979 -1 0.0666046142578125 6 Unmodified _TFGERVVAF_ ENSG00000048392|ENST00000251810|RRM2B;nc|ENSG00000048392|Q7LG56-2|RRM2B;nc|ENSG00000048392|Q7LG56-6|RRM2B 51.41523569358685 0.0372669606867193 4 T[WP]SVVA{M(Oxidation (M))|F} 8 4 42.702 0.0 0.0 4.168 0.0 0.0 119.07390792060704 0.0 119.07390792060704 0.0 5.248849851117264 0.0 0.0 0 0.8494850021680094 0.0 0.5102396519197265 0.0 T[WP]SVVA{M(Oxidation (M))|F} 4.168 - 194 1 1.11 59245.7 1.0 9254 4851 14101 HBL1_DMSO_200M_050219_2,14107 HBL1_DMSO_200M_050219_2,14107,TFGERVVAF True True TFGERVVAF 74.519019 513.274645984173 7027121.0 14101.0 ENSG00000048392|ENST00000251810|RRM2B;;nc|ENSG00000048392|Q7LG56-6|RRM2B;;nc|ENSG00000048392|Q7LG56-2|RRM2B 7.048597494761149 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14108 74.521 86.0 706100.0 25 0 35634.0 -1 NFYCDVPQVL 10 81 627.796250368968 1253.577947804736 2 627.7968017458916 MULTI CID FTMS 0 0 0 14101 626609.875 0.3087927801975582 -3 0.2875518798828125 7 Carbamidomethyl (C) _NFYC(Carbamidomethyl (C))DVPQVL_ ENSG00000141194|ENST00000268912|OR4D1;ENSG00000255713|ENST00000545221|OR4D2 13.90604991867851 0.6142120002215601 4 MTGAQV{I|L} 7 -1 52.568 0.0 0.0 4.1934 0.0 0.0 535.2096424787125 0.0 535.2096424787125 0.0 17.27475280225684 0.0 0.0 0 0.7742275032520141 0.0 1.610924374808178 0.0 MTGAQV{I|L} 4.1934 - 1539 1 1.11 55246.3 1.0 9255 4851 14101 HBL1_DMSO_200M_050219_2,14108 HBL1_DMSO_200M_050219_2,14108,NFYCDVPQVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14109 74.523 113.0 791220.0 25 0 104060.0 + 3733 DAFRVNVI 8 89 467.2616036647327 932.5086543962652 2 467.2614318728447 MULTI CID FTMS 0 0 0 14101 565851.125 0.0306515086134982 -3 0.2875518798828125 8 Unmodified _DAFRVNVI_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 41.8396318013385 0.2035142800366642 4 {[NV]|[RG]}R{M(Oxidation (M))|F}ADV{I|L} 8 6 + 40.099 0.0 0.0 4.3001 4.3001 67.842 0.0 0.0 0.0 1.5186375580366729 1.5186375580366729 1.5186375580366729 1.5186375580366729 0 0.8494850021680094 0.0 0.0 0.0 {[NV]|[RG]}R{M(Oxidation (M))|F}ADV{I|L};{[DA]|[EG]}{[NV]|[RG]}[R{M(Oxidation (M))|F}]V{I|L};{[DA]|[EG]}{[NV]|[RG]}[R{M(Oxidation (M))|F}]{I|L}V 4.3001;4.1372;2.5443 -;-;- 203 1 1.11 72226.5 1.0 9256 4851 14101 HBL1_DMSO_200M_050219_2,14109 HBL1_DMSO_200M_050219_2,14109,DAFRVNVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14110 74.526 128.0 775230.0 25 0 171700.0 + 45723 YYFDYKEQL 9 93 634.7954130781385 1267.576273223077 2 634.7958251833916 MULTI CID FTMS 0 0 0 14101 496525.28125 0.1337025061346197 -3 0.2875518798828125 9 Unmodified _YYFDYKEQL_ ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF 62.57269311338072 0.0246576765497938 4 YY{M(Oxidation (M))|F}DY 5 4 52.971 0.0 0.0 4.1789 0.0 0.0 0.0 513.2686938425661 513.2686938425661 1.9043748961052387 0.0 0.0 0.0 0 0.75 2.0 0.3252574989159953 0.0 + YY{M(Oxidation (M))|F}DY 4.1789 + + 1379 + 1 1.11 77513.9 1.0 9257 4851 14101 HBL1_DMSO_200M_050219_2,14110 HBL1_DMSO_200M_050219_2,14110,YYFDYKEQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14111 74.528 102.0 727250.0 25 0 172050.0 -1 YYYSCHVCGFE 11 69 714.2730215941269 1426.5314902550538 2 714.2737304568291 MULTI CID FTMS 0 0 0 14101 433835.59375 1.0 0 0.0 10 Carbamidomethyl (C) _YYYSC(Carbamidomethyl (C))HVCGFE_ ENSG00000151612|ENST00000508784|ZNF827;nc|ENSG00000151612|Q17R98-2|ZNF827;nc|ENSG00000151612|Q17R98-3|ZNF827 18.1463463914782 0.6576820063886638 4 YYYD[DG]{I|L} 7 -1 66.726 0.0 0.0 4.6775 0.0 0.0 0.0 534.1597994440061 534.1597994440061 41.465460211140055 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7742275032520141 0.0 YYYD[DG]{I|L} 4.6775 - 70 + 1 1.11 58189.9 1.0 9258 4851 14101 HBL1_DMSO_200M_050219_2,14111 HBL1_DMSO_200M_050219_2,14111,YYYSCHVCGFE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14112 74.531 113.0 790130.0 25 0 50961.0 + 21677 LPLNIERNI 9 108 541.3210700038595 1080.627587074519 2 541.3216430544853 MULTI CID FTMS 0 0 0 14101 386646.6875 0.9865642776915818 -1 0.0666046142578125 11 Unmodified _LPLNIERNI_ ENSG00000112685|ENST00000230449|EXOC2 43.77239144664712 0.0547478964384323 4 {I|L}P{I|L}N{I|L}E[RN]{I|L} 9 0 + 80.724 0.0 0.0 7.4701 7.4701 85.525 0.0 0.0 0.0 67.01213124741251 1.9627248839266545 1.9627248839266545 4.771212547196626 0 0.805462187404089 2.0 0.0 0.805462187404089 + + {I|L}P{I|L}N{I|L}E[RN]{I|L};{I|L}P{I|L}N{I|L}[H{I|L}]YV;{I|L}P{I|L}{I|L}NE[RN]{I|L};{I|L}P{I|L}GG{I|L}E[RN]{I|L};{I|L}P{I|L}{I|L}N[H{I|L}]YV;{I|L}P{I|L}NG[KG][RN]{I|L};{I|L}P{I|L}{I|L}GGE[RN]{I|L};{I|L}P{I|L}GG{I|L}[H{I|L}]YV;{I|L}{I|L}PN{I|L}E[RN]{I|L};{I|L}P{I|L}{I|L}{[WT]|[RM]}[EP]{I|L} 7.4701;7.0285;6.6355;6.6179;6.194;6.1764;5.7834;5.4311;4.8254;4.6754 +;-;-;-;-;-;-;-;-;- + 400 + 1 1.11 75050.3 1.0 9259 4851 14101 HBL1_DMSO_200M_050219_2,14112 HBL1_DMSO_200M_050219_2,14112,LPLNIERNI True True LPLNIERNI 74.530537 541.321643054485 3100703.5 14101.0 ENSG00000112685|ENST00000230449|EXOC2 4.356585343678792 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14113 74.532 50.0 737420.0 25 0 62999.0 -1 DEVDWCCHAHD 11 60 722.2566139973442 1442.4986750614885 2 722.7583495974541 MULTI CID FTMS 0 0 0 14101 371959.65625 1.0 0 0.0 12 2 Carbamidomethyl (C) _DEVDWC(Carbamidomethyl (C))C(Carbamidomethyl (C))HAHD_ ENSG00000158786|ENST00000375102|PLA2G2F;nc|ENSG00000158786|Q9BZM2|PLA2G2F 1.1933415558491238 0.8695176722560516 4 [TP]{I|L} 3 -1 16.655 0.0 0.0 1.1546 0.0 0.0 0.0 1128.2911304660383 1128.2911304660383 4.43697499232713 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 [TP]{I|L} 1.1546 - 24 1 1.11 33915.7 1.0 9260 4851 14101 HBL1_DMSO_200M_050219_2,14113 HBL1_DMSO_200M_050219_2,14113,DEVDWCCHAHD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14114 74.535 154.0 744490.0 25 0 63552.0 + 12455 GTYTGFIKV 9 133 493.2717932528655 984.529033572531 2 493.2718383669853 MULTI CID FTMS 0 0 0 14101 303807.53125 0.0740328360263896 -3 0.2875518798828125 13 Unmodified _GTYTGFIKV_ ENSG00000266094|ENST00000579436|RASSF5;nc|ENSG00000266094|Q8WWW0-2|RASSF5;nc|ENSG00000266094|Q8WWW0-3|RASSF5 47.74868867922204 0.0453060283459952 4 {[SA]|[TG]}YTG{M(Oxidation (M))|F}{I|L}KV 9 0 + 65.653 0.0 0.0 6.6685 6.6685 82.754 0.0 0.0 0.0 18.69666231504993 4.658402443099732 4.658402443099732 4.658402443099732 0 0.6505149978319906 1.154901959985743 0.4247425010840047 0.2887254899964357 + + {[SA]|[TG]}YTG{M(Oxidation (M))|F}{I|L}KV;{[SA]|[TG]}YTG{M(Oxidation (M))|F}{I|L}VK 6.6685;6.1953 +;- + 343 + 1 1.11 88780.8 1.0 9261 4851 14101 HBL1_DMSO_200M_050219_2,14114 HBL1_DMSO_200M_050219_2,14114,GTYTGFIKV True True GTYTGFIKV 74.534912 493.271838366985 52783920.0 14101.0 nc|ENSG00000266094|Q8WWW0-2|RASSF5;;nc|ENSG00000266094|Q8WWW0-3|RASSF5;;ENSG00000266094|ENST00000579436|RASSF5 7.144822597503662 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14115 74.538 171.0 678220.0 25 0 99749.0 + 35767 SVILKLSNV 9 122 486.8081632554279 971.6017735776558 2 486.8085204958916 MULTI CID FTMS 0 0 0 14101 275092.4375 0.6127893073011379 -1 0.0666046142578125 14 Unmodified _SVILKLSNV_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000452600.1_1_2:130987586-130988813:+|nuORF;ENST00000477976.5_1_1:880076-889593:-|nuORF 41.8396318013385 0.0653578398400075 4 [VS]{I|L}{I|L}[{M(Oxidation (M))|F}V]VPV 9 4 + 50.045 0.0 0.0 5.1508 5.1508 85.007 0.0 0.0 0.0 7.97894084362683 0.954387282529794 0.954387282529794 14.943868066579704 0 0.8494850021680094 2.0 0.0 0.0 [VS]{I|L}{I|L}[{M(Oxidation (M))|F}V]VPV;{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V]{I|L}{I|L}[PA];{I|L}{I|L}S[{M(Oxidation (M))|F}V]{I|L}{I|L}[PA];{I|L}{I|L}K{I|L}SDV[KG];[VS]{I|L}{I|L}G{[TV]|[{I|L}S]}V[KG];[{I|L}T]V[{M(Oxidation (M))|F}V]{I|L}{I|L}[PA];[K{I|L}]{I|L}{I|L}SDV[KG];{I|L}{I|L}K{I|L}S{[NV]|[RG]}SV;[VS][KQ]{[QV]|[N{I|L}]|[RA]|[KV]}[RK];{[TV]|[{I|L}S]}{I|L}[K{I|L}]DV[KG] 5.1508;3.6127;3.5793;3.4847;3.1909;3.07;2.5966;2.1129;1.8755;1.4568 -;-;-;-;-;-;-;-;-;- 898 + 1 1.11 93138.3 1.0 9262 4851 14101 HBL1_DMSO_200M_050219_2,14115 HBL1_DMSO_200M_050219_2,14115,SVILKLSNV True True SVILKLSNV 74.538246 486.808520495892 3468944.5 14101.0 ENSG00000188976|ENST00000327044|NOC2L;;ENST00000452600.1_1_2:130987586-130988813:+|nuORF;;ENST00000477976.5_1_1:880076-889593:-|nuORF 4.435679833094279 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14116 74.55 681.0 612350.0 25 0 46596.0 + 25603 NFLNMSRSM 9 245 550.2546842662894 1098.4948155993786 2 550.2552368044853 MULTI CID FTMS 0 0 0 14101 269236.09375 0.0645158886818789 -3 0.2875518798828125 15 Unmodified _NFLNMSRSM_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 61.60191391372663 0.0251951588191061 4 GG{M(Oxidation (M))|F}{I|L}NMSRA{M(Oxidation (M))|F} 10 3 + 64.08 0.0 0.0 5.8335 5.8335 72.538 0.0 0.0 0.0 0.7918124604762582 0.6460349144600102 0.6460349144600102 0.6460349144600102 0 0.9247425010840048 1.0 0.6109243748081782 1.089136830878453 GG{M(Oxidation (M))|F}{I|L}NMSRA{M(Oxidation (M))|F};GG{M(Oxidation (M))|F}{I|L}NMSRSM;GG{M(Oxidation (M))|F}{I|L}NMSRMS;GG{M(Oxidation (M))|F}{I|L}MNSRA{M(Oxidation (M))|F};GG{M(Oxidation (M))|F}{I|L}MNSRSM;GG{M(Oxidation (M))|F}{I|L}GGMSRA{M(Oxidation (M))|F};GG{M(Oxidation (M))|F}{I|L}GGMSRSM;GG{M(Oxidation (M))|F}{I|L}MNSRMS;GG{M(Oxidation (M))|F}{I|L}GGMSRMS;GG{M(Oxidation (M))|F}{I|L}NM[WK]{M(Oxidation (M))|F} 5.8335;5.7746;5.5687;5.1972;5.1383;4.9992;4.9404;4.9324;4.7344;4.688 -;-;-;-;-;-;-;-;-;- 4983 + 1 1.11 307625.2 1.0 9263 4851 14101 HBL1_DMSO_200M_050219_2,14116 HBL1_DMSO_200M_050219_2,14116,NFLNMSRSM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14117 74.552 83.0 705660.0 25 0 52856.0 + 9125 FFPEYTHQL 9 90 591.2849392942154 1180.5553256552307 2 591.2858764529228 MULTI CID FTMS 0 0 0 14101 264458.8125 0.5264237255019175 3 -0.27056884765625 16 Unmodified _FFPEYTHQL_ ENSG00000128708|ENST00000264108|HAT1 22.736283301280096 0.2418982879461534 4 EP[{M(Oxidation (M))|F}E] 4 7 14.935 0.0 0.0 1.2651 0.0 0.0 660.3233509748062 0.0 660.3233509748062 0.0 -1.2628749457997657 -1.2628749457997657 0.0 0 0.3252574989159953 0.0 0.0 0.0 EP[{M(Oxidation (M))|F}E] 1.2651 - 103 1 1.11 50794.3 1.0 9264 4851 14101 HBL1_DMSO_200M_050219_2,14117 HBL1_DMSO_200M_050219_2,14117,FFPEYTHQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14118 74.555 164.0 394860.0 25 0 33389.0 + 4568 DAYRMLSRL 9 98 375.5343909761269 1123.5813435285809 3 375.5338928103447 MULTI CID FTMS 0 0 0 14101 229524.015625 0.3338518085792937 2 -0.2351531982421875 17 Unmodified _DAYRMLSRL_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-2|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 20.580933911654288 0.2795815587326093 4 DA[YR]M{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 9 2 + 66.265 0.0 0.0 5.8976 5.8976 86.91 0.0 0.0 0.0 55.42718526786852 7.1919646325935815 7.1919646325935815 11.237125054200234 0 1.0356668758921828 1.6989700043360187 0.0 0.3054621874040891 DA[YR]M{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};DA[YR]{I|L}M{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};DA{I|L}[YR]M{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};D{I|L}A[YR]M{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 5.8976;4.8975;4.6256;2.5738 -;-;-;- 180 + 1 1.11 56214.1 1.0 9265 4851 14101 HBL1_DMSO_200M_050219_2,14118 HBL1_DMSO_200M_050219_2,14118,DAYRMLSRL False True DAYRMLSRL 74.555191 375.533892810345 20065513.0 14101.0 ENSG00000169093|ENST00000381317|ASMTL;;nc|ENSG00000292339|O95671-3|ASMTL;;nc|ENSG00000292339|O95671-2|ASMTL 4.88983424504598 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14119 74.562 408.0 550640.0 25 0 43618.0 + 42446 LYIDRPLPY 9 169 574.8362990174852 1147.6580451017703 2 574.8368408083916 MULTI CID FTMS 0 0 0 14101 216924.109375 0.6354364661619721 -3 0.2875518798828125 18 Unmodified _VTFSREVIVV_ ENSG00000172661|ENST00000623400|WASHC2C;ENSG00000099290|ENST00000282633|WASHC2A;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C 15.847184025352805 0.5816416552707754 4 V 1 9 12.764 0.0 0.0 1.1122 0.0 0.0 1030.5786287583117 0.0 1030.5786287583117 0.0 1.7951097132083405 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1122 + + 311 + 1 1.11 172555.5 1.0 9266 4851 14101 HBL1_DMSO_200M_050219_2,14119 HBL1_DMSO_200M_050219_2,14119,VTFSREVIVV False False LYIDRPLPY 74.562485 574.836840808392 116895.5625 14101.0 ENSG00000172661|ENST00000623400|WASHC2C;;ENSG00000099290|ENST00000282633|WASHC2A;;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C;;nc|ENSG00000099290|Q641Q2-2|WASHC2A;;nc|ENSG00000172661|Q9Y4E1-5|WASHC2C 1.9900802373886108 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14120 74.578 800.0 158030.0 25 0 31391.0 -1 0 83 1132.811770385687 3395.4134817572613 3 1133.149096667767 MULTI CID FTMS 0 0 0 14101 176844.1875 0.1468950425966016 4 -0.37786865234375 19 4 YS{I|L}ET[EP][YN] 9 -1 17.277 0.0 0.0 0.50883 0.0 0.0 2280.9172181847985 0.0 2280.9172181847985 0.0 3.208793562462453 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.3252574989159953 YS{I|L}ET[EP][YN] 0.50883 - 314 + 1 1.11 98264.0 0.8299999833106995 9267 4851 14101 HBL1_DMSO_200M_050219_2,14120 HBL1_DMSO_200M_050219_2,14120, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14121 74.591 800.0 155800.0 25 0 30292.0 -1 MIWLCACCWCT 11 110 788.7970570763302 1575.5795612194604 2 788.7976562380791 MULTI CID FTMS 0 0 0 14101 148242.53125 0.3766955528786024 3 -0.27056884765625 20 4 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))IWLC(Carbamidomethyl (C))AC(Carbamidomethyl (C))C(Carbamidomethyl (C))WC(Carbamidomethyl (C))T_ L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|102|2|anti-sense 0.3506318815782774 0.8734936314171269 4 YYYDGDV 7 -1 71.516 0.0 0.0 4.539 0.0 0.0 0.0 697.2245577447874 697.2245577447874 47.32016661481893 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.1307196863200843 0.0 YYYDGDV 4.539 - 382 + 1 1.11 91058.5 0.8799999952316284 9268 4851 14101 HBL1_DMSO_200M_050219_2,14121 HBL1_DMSO_200M_050219_2,14121,MIWLCACCWCT False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 14123 74.596 47.0 453660.0 25 0 40234.0 40185 VGPRRGSLQPP 11 52 582.335248833607 1162.655944734014 2 582.3353759646416 MULTI CID FTMS 0 0 0 14122 1141652.25 0.9061411748738298 -2 0.1522216796875 1 Unmodified _VGPRRGSLQPP_ ENST00000397901.7_1_16:89711018-89711168:-|nuORF 1.3295316138638542 0.8688751186870782 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.118 23837.2 1.0 9269 4852 14122 HBL1_DMSO_200M_050219_2,14123 HBL1_DMSO_200M_050219_2,14123,VGPRRGSLQPP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14124 74.598 103.0 564320.0 25 0 79281.0 + 35124 SQYGEIVNI 9 97 511.76123121412286 1021.5079094950456 2 511.7612182497978 MULTI CID FTMS 0 0 0 14122 334804.25 0.6662169560310848 1 -0.1495361328125 2 Unmodified _SQYGEIVNI_ ENSG00000134597|ENST00000305536|RBMX2 38.17557092003332 0.0854718145212029 4 {[QS]|[NT]}Y{[DA]|[EG]}{I|L}VN{I|L} 9 0 + 41.678 0.0 0.0 4.08 4.08 73.528 0.0 0.0 0.0 4.963352341680476 23.3127702000528 4.963352341680476 5.5453259810693964 0 0.7429928190999391 0.0 1.4124379954164592 0.0 + + {[QS]|[NT]}Y{[DA]|[EG]}{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AY{[QS]|[NT]}VN{I|L};[YG]E{[QS]|[NT]}{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}A[C(Carbamidomethyl (C))S]{I|L}[KC]{I|L};{[TV]|[{I|L}S]}C(Carbamidomethyl (C)){[CT]|[{M(Oxidation (M))|F}G]}{I|L}VN{I|L};{[DA]|[EG]}Y{[QS]|[NT]}{I|L}VN{I|L};{[NV]|[RG]}{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}VN{I|L};[YG]E{I|L}{[QS]|[NT]}VN{I|L};{[DA]|[EG]}Y{I|L}{[QS]|[NT]}VN{I|L};{[TV]|[{I|L}S]}C(Carbamidomethyl (C)){[DA]|[EG]}{I|L}[KC]{I|L} 4.08;3.5372;2.8778;2.8098;2.7901;2.6454;2.4238;2.3883;2.156;1.5733 +;-;-;-;-;-;-;-;-;- + 250 1 1.118 53111.8 1.0 9270 4852 14122 HBL1_DMSO_200M_050219_2,14124 HBL1_DMSO_200M_050219_2,14124,SQYGEIVNI True True SQYGEIVNI 74.598445 509.784 4466360.5 14122.0 ENSG00000134597|ENST00000305536|RBMX2 1.47954238516589 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14125 74.6 11.0 4586100.0 25 0 690440.0 + 1316 AIVKEIVNI 9 83 499.81607843687897 997.617603940558 2 499.8159362673759 MULTI CID FTMS 0 0 0 14122 4462814.0 1.0 0 0.0 3 Unmodified _AIVKEIVNI_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 37.07464296494664 0.0915153923251136 4 [{I|L}A]VSVA{I|L}VN{I|L} 10 3 + 72.128 0.0 0.0 7.23 7.23 88.312 0.0 0.0 0.0 23.77758779335053 10.012262311882765 10.012262311882765 8.293037728310253 0 1.274227503252014 2.0 0.0 0.0 [{I|L}A]VSVA{I|L}VN{I|L};[{I|L}A]VKE{I|L}VN{I|L};[{I|L}A][TA]{I|L}A{I|L}VN{I|L};[{I|L}A]VSVV[{I|L}A]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}A{I|L}VN{I|L};[{I|L}A][TA]{I|L}V[{I|L}A]N{I|L};[VS]{[VA]|[{I|L}G]}{I|L}A{I|L}VN{I|L};[{I|L}T]AA{I|L}A{I|L}VN{I|L};[VS][{I|L}A]VA{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}V[{I|L}A]N{I|L} 7.23;6.3987;6.2557;5.1739;4.8466;4.1997;3.095;2.7932;2.7932;2.7905 -;+;-;-;-;-;-;-;-;- + 624 1 1.118 45785.3 1.0 9271 4852 14122 HBL1_DMSO_200M_050219_2,14125 HBL1_DMSO_200M_050219_2,14125,AIVKEIVNI True True AIVKEIVNI 74.599622 499.815936267376 36240764.0 14122.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 4.256362120310466 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14126 74.601 51.0 1294400.0 25 0 125640.0 + 5553 DMLQQLHSV 9 102 535.7685309678717 1069.5225090025433 2 535.7683593630791 MULTI CID FTMS 0 0 0 14122 642675.9375 0.1609300531537286 -2 0.1522216796875 4 Unmodified _DMLQQLHSV_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000562407.1_1_16:23695226-23699079:+|nuORF 103.74828524460852 0.0090107942103208 4 [MD]{I|L}QQ{I|L}HSV 9 0 + 91.252 0.0 0.0 8.532 8.532 92.739 0.0 0.0 0.0 27.14764271519249 21.615010663094225 21.615010663094225 9.208187539523747 0 0.7742275032520141 2.0 2.004432191740108 0.8807196863200843 + + [MD]{I|L}QQ{I|L}HSV;[MD]{I|L}[AG]Q{I|L}HSV;[MD]{I|L}Q[AG]{I|L}HSV;[MD]{I|L}QQ[HV]TV;[MD]{I|L}QQ[HV]S{I|L};[MD]{I|L}[AG][AG]{I|L}HSV;[MD]{I|L}[AG]Q[HV]TV;[MD]{I|L}[AG]Q[HV]S{I|L};[MD]{I|L}Q[AG][HV]TV;[MD]{I|L}Q[AG][HV]S{I|L} 8.532;7.671;7.3151;6.7925;6.511;5.9907;5.9315;5.65;5.5755;5.2941 +;-;-;-;-;-;-;-;-;- + 634 + 1 1.118 55883.6 1.0 9272 4852 14122 HBL1_DMSO_200M_050219_2,14126 HBL1_DMSO_200M_050219_2,14126,DMLQQLHSV True True DMLQQLHSV 74.600976 535.768359363079 49752432.0 14122.0 ENST00000562407.1_1_16:23695226-23699079:+|nuORF;;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;;ENSG00000166851|ENST00000300093|PLK1 8.818455696105957 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14127 74.603 81.0 532910.0 25 0 60998.0 + 26720 NYVPEVSAL 9 73 496.25850232938905 990.502451725578 2 496.2584106326103 MULTI CID FTMS 0 0 0 14122 364009.1875 0.1917990394614587 -2 0.1522216796875 5 Unmodified _NYVPEVSAL_ ENSG00000182774|ENST00000647841|RPS17;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF 20.453626601364224 0.2830276176381075 4 [EP]VS 4 5 27.646 0.0 0.0 2.7911 0.0 0.0 0.0 575.2836461438 575.2836461438 0.1985045195764847 0.0 0.0 0.0 0 0.0 0.958607314841775 0.4247425010840047 0.0 + [EP]VS 2.7911 + + 105 1 1.118 40140.3 1.0 9273 4852 14122 HBL1_DMSO_200M_050219_2,14127 HBL1_DMSO_200M_050219_2,14127,NYVPEVSAL False True NYVPEVSAL 74.602812 496.25841063261 22122610.0 14122.0 ENSG00000182774|ENST00000647841|RPS17;;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;;ENST00000561068.5_3_15:83205554-83208094:-|nuORF 6.209875742594401 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14128 74.605 108.0 709640.0 25 0 81605.0 + 32476 SAIRELENL 9 113 522.7872731944176 1043.559993455635 2 522.7872802615166 MULTI CID FTMS 0 0 0 14122 327349.28125 0.434028205928837 -2 0.1522216796875 6 Unmodified _SAIRELENL_ ENSG00000066557|ENST00000370952|LRRC40 59.36838082759317 0.0264317782606298 4 {[SA]|[TG]}{I|L}RE{I|L}EN{I|L} 9 0 + 55.282 0.0 0.0 5.2974 5.2974 82.74 0.0 0.0 0.0 17.6047653249357 25.41202772037167 17.6047653249357 9.208187539523747 0 1.2940228147639203 1.5228787452803376 0.0 0.0 + + {[SA]|[TG]}{I|L}RE{I|L}EN{I|L};{[SA]|[TG]}{I|L}RE{I|L}EGG{I|L};{[SA]|[TG]}{I|L}C{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PA]{I|L};{[TV]|[{I|L}S]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}EN{I|L};{[SA]|[TG]}{I|L}QQ{I|L}{[SA]|[TG]}N{I|L};{[SA]|[TG]}[R{I|L}]E{I|L}C[RP];{[SA]|[TG]}G[K{I|L}]{[NV]|[RG]}EN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[W{I|L}]{I|L}{[SA]|[TG]}N{I|L};[{I|L}T]GRE{I|L}EN{I|L};{[SA]|[TG]}G[{I|L}A]Q{I|L}{[SA]|[TG]}N{I|L} 5.2974;4.4151;3.3847;3.3015;3.2881;3.2758;3.1713;3.0258;2.9292;2.8432 +;-;-;-;-;-;-;-;-;- + 1053 1 1.118 63886.8 1.0 9274 4852 14122 HBL1_DMSO_200M_050219_2,14128 HBL1_DMSO_200M_050219_2,14128,SAIRELENL True True SAIRELENL 74.605106 522.787280261517 4952882.0 14122.0 ENSG00000066557|ENST00000370952|LRRC40 4.134648482004802 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14129 74.619 800.0 141340.0 25 0 28518.0 -1 0 61 1163.457987468611 3487.352133006033 3 1163.795458972454 MULTI CID FTMS 0 0 0 14122 239935.09375 0.0019592271683716 26 -2.4460372924804688 7 4 Y{M(Oxidation (M))|F} 2 -1 9.464 0.0 0.0 0.27138 0.0 0.0 1311.4131204101334 1862.766870885652 3174.179991295786 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.27138 - 16 + 1 1.118 92626.3 0.9800000190734864 9275 4852 14122 HBL1_DMSO_200M_050219_2,14129 HBL1_DMSO_200M_050219_2,14129, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14130 74.625 352.0 455140.0 25 0 34891.0 + 21142 LPAQPMISV 9 167 478.267754920238 954.520956907276 2 478.2676574587822 MULTI CID FTMS 0 0 0 14122 218344.015625 0.9391030642518025 1 -0.1495361328125 8 Unmodified _LPAQPMISV_ ENSG00000117009|ENST00000366559|KMO;nc|ENSG00000117009|O15229-2|KMO;nc|ENSG00000117009|O15229-3|KMO 42.09456458481378 0.0639583784996157 4 NHHSV 5 7 33.148 0.0 0.0 3.4728 0.0 0.0 362.2223251707509 0.0 362.2223251707509 0.0 3.736480491502508 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 NHHSV 3.4728 - 726 + 1 1.118 123714.2 1.0 9276 4852 14122 HBL1_DMSO_200M_050219_2,14130 HBL1_DMSO_200M_050219_2,14130,LPAQPMISV True True LPAQPMISV 74.625337 478.267657458782 3425782.5 14122.0 ENSG00000117009|ENST00000366559|KMO;;nc|ENSG00000117009|O15229-3|KMO;;nc|ENSG00000117009|O15229-2|KMO 2.295436054468155 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14131 74.638 744.0 396800.0 25 0 20530.0 -1 AVFPDDMPTL 10 231 561.2631044089602 1120.5116558847203 2 561.2634765505791 MULTI CID FTMS 0 0 0 14122 200111.8125 0.8460643984110804 2 -0.1849517822265625 9 Oxidation (M) _AVFPDDM(Oxidation (M))PTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 32.30548876998284 0.2428506522065767 4 [YV]{I|L}WC(Carbamidomethyl (C))CAQ 8 -1 31.11 0.0 0.0 2.7764 0.0 0.0 0.0 94.07095699239532 94.07095699239532 3.930895539944995 0.0 0.0 0.0 0 0.1803115997617927 2.0 0.0 0.0 [YV]{I|L}WC(Carbamidomethyl (C))CAQ 2.7764 - 4811 1 1.118 223187.2 1.0 9277 4852 14122 HBL1_DMSO_200M_050219_2,14131 HBL1_DMSO_200M_050219_2,14131,AVFPDDMPTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14132 74.651 749.0 307400.0 25 0 32009.0 + + 10240 RVCEEIAIIPS 11 171 615.331441271595 1228.64832960999 2 615.3322021365166 MULTI CID FTMS 0 0 0 14122 166968.21875 1.0 0 0.0 10 Unmodified _FQPPPYALPLS_ ENSG00000182774|ENST00000647841|RPS17;ENST00000560639.1_1_15:83207600-83209179:-|nuORF;ENST00000559273.1_1_15:83208730-83209179:-|nuORF 24.99096001346401 0.505407273373304 4 {[DS]|[MA]|[CV]|TT}{I|L}{I|L}ANHY{I|L}SP 11 -1 + 44.351 0.0 0.0 3.6098 3.6098 64.456 0.0 0.0 0.0 0.951549272891242 0.951549272891242 0.951549272891242 0.951549272891242 0 0.0 0.0 0.5629529932484498 0.3252574989159953 {[DS]|[MA]|[CV]|TT}{I|L}{I|L}ANHY{I|L}SP;{[DS]|[MA]|[CV]|TT}{I|L}YHNA{I|L}{I|L}SP;{[DS]|[MA]|[CV]|TT}{I|L}{I|L}AYNH{I|L}SP;{[DS]|[MA]|[CV]|TT}{I|L}{I|L}ANYH{I|L}SP;{[DS]|[MA]|[CV]|TT}{I|L}HNYA{I|L}{I|L}SP;{[DS]|[MA]|[CV]|TT}{I|L}{I|L}AY[HQ]VSP;{[DS]|[MA]|[CV]|TT}{I|L}HYNA{I|L}{I|L}SP;{[DS]|[MA]|[CV]|TT}{I|L}{I|L}AN[WQ]VSP;{[DS]|[MA]|[CV]|TT}V[HQ]YA{I|L}{I|L}SP;{[DS]|[MA]|[CV]|TT}V[WQ]NA{I|L}{I|L}SP 3.6098;3.5323;3.4908;3.4436;3.4134;3.4079;3.3662;3.3607;3.3305;3.2833 -;-;-;-;-;-;-;-;-;- 4221 + 1 1.118 172883.0 1.0 9278 4852 14122 HBL1_DMSO_200M_050219_2,14132 HBL1_DMSO_200M_050219_2,14132,FQPPPYALPLS False False RVCEEIAIIPS 74.651218 615.332202136517 2333556.5 14122.0 ENSG00000182774|ENST00000647841|RPS17;;ENST00000560639.1_1_15:83207600-83209179:-|nuORF;;ENST00000559273.1_1_15:83208730-83209179:-|nuORF 1.681334262092908 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14133 74.665 800.0 335200.0 25 0 22718.0 + 30126 QVLDKFIHV 9 244 366.88175010114185 1097.6234209036256 3 366.8815185427666 MULTI CID FTMS 0 0 0 14122 150102.296875 0.9076229276721648 -2 0.1522216796875 11 Unmodified _QVLDKFIHV_ ENSG00000171777|ENST00000615439|RASGRP4;ENST00000588404.5_1_19:38907704-38910742:-|nuORF;ENST00000592322.5_1_19:38901850-38916815:-|nuORF;nc|ENSG00000171777|Q8TDF6-2|RASGRP4;nc|ENSG00000171777|Q8TDF6-5|RASGRP4;nc|ENSG00000171777|Q8TDF6-8|RASGRP4;nc|ENSG00000171777|Q8TDF6-9|RASGRP4 48.345845343767074 0.0439967357579942 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DK{M(Oxidation (M))|F}{I|L}HV 9 0 + 62.521 0.0 0.0 5.696 5.696 77.095 0.0 0.0 0.0 19.366130211356065 5.642714304385628 5.642714304385628 3.26606256887672 0 0.1022338482433752 1.2218487496163564 0.6989700043360187 0.5 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DK{M(Oxidation (M))|F}{I|L}HV;{[QV]|[N{I|L}]|[RA]|[KV]}VEK{M(Oxidation (M))|F}{I|L}HV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DK{M(Oxidation (M))|F}{I|L}VH;{[QV]|[N{I|L}]|[RA]|[KV]}VEK{M(Oxidation (M))|F}{I|L}VH;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V[SG]{M(Oxidation (M))|F}{I|L}HV;{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}[SG]{M(Oxidation (M))|F}{I|L}HV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V[SG]{M(Oxidation (M))|F}{I|L}VH;{[QV]|[N{I|L}]|[RA]|[KV]}VS{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}HV;{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}[SG]{M(Oxidation (M))|F}{I|L}VH;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[R{M(Oxidation (M))|F}]S{I|L}HV 5.696;5.3985;5.1819;4.8844;4.3538;4.0563;3.8398;3.8298;3.5422;3.3718 +;-;-;-;-;-;-;-;-;- + 1339 + 1 1.118 214819.9 0.6800000071525574 9279 4852 14122 HBL1_DMSO_200M_050219_2,14133 HBL1_DMSO_200M_050219_2,14133,QVLDKFIHV True True QVLDKFIHV 74.665033 366.881518542767 1500821.5 14122.0 nc|ENSG00000171777|Q8TDF6-2|RASGRP4;;ENSG00000171777|ENST00000615439|RASGRP4;;ENST00000588404.5_1_19:38907704-38910742:-|nuORF;;nc|ENSG00000171777|Q8TDF6-9|RASGRP4;;nc|ENSG00000171777|Q8TDF6-8|RASGRP4;;ENST00000592322.5_1_19:38901850-38916815:-|nuORF;;nc|ENSG00000171777|Q8TDF6-5|RASGRP4 6.518311659495036 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14134 74.679 800.0 450720.0 25 0 65969.0 + 24276 MAPRTLLL 8 215 457.77859267541527 0 457.7780029177666 PEAK CID FTMS 0 0 0 14122 133352.421875 0.0276309156617618 -4 0.3731689453125 12 Unmodified _MAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206341|P01893|HLA-H;nc|ENSG00000206503|P04439-2|HLA-A 39.94969957227396 0.1411433437889388 4 {I|L}MA 3 7 13.716 0.0 0.0 1.5015 0.0 0.0 131.09414362408057 464.26317617641735 595.3573198004979 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {I|L}MA 1.5015 - 299 + 1 1.118 274508.8 0.7300000190734863 9280 4852 14122 HBL1_DMSO_200M_050219_2,14134 HBL1_DMSO_200M_050219_2,14134,MAPRTLLL False True MAPRTLLL 74.678847 457.778002917767 94968880.0 14122.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206341|P01893|HLA-H;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 2.190684497356415 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14135 74.694 800.0 175380.0 25 0 15868.0 21101 LPAKQAELTRR 11 173 641.8827479088961 1281.7509428845922 2 641.8824951052666 MULTI CID FTMS 0 0 0 14122 129804.5546875 0.3133530557678106 -10 1.0207061767578125 13 Unmodified _LPAKQAELTRR_ ENSG00000100106|ENST00000644935|TRIOBP;nc|ENSG00000100106|Q9H2D6-2|TRIOBP;nc|ENSG00000100106|Q9H2D6-3|TRIOBP 3.2813086475875832 0.8596665074481906 4 [{I|L}P]AKV 5 7 18.16 0.0 0.0 1.4168 0.0 0.0 0.0 770.3907188457828 770.3907188457828 7.050464127001703 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [{I|L}P]AKV 1.4168 - 195 1 1.118 111901.4 0.949999988079071 9281 4852 14122 HBL1_DMSO_200M_050219_2,14135 HBL1_DMSO_200M_050219_2,14135,LPAKQAELTRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14136 74.708 800.0 174180.0 25 0 6500.7 + 21027 LNYLTLIGRLS 11 185 421.5871342311904 1261.7395732937712 3 421.9209167361259 MULTI CID FTMS 0 0 0 14122 123918.953125 1.0 0 0.0 14 Unmodified _LNYLTLIGRLS_ REV__ENSG00000197977|ENST00000354666|ELOVL2 8.751783647060863 0.8338564498997137 4 {[TV]|[{I|L}S]}E[DP]GGS 8 -1 22.837 0.0 0.0 1.8099 0.0 0.0 0.0 516.3962025337967 516.3962025337967 3.751505393256501 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.174742501084005 0.0 {[TV]|[{I|L}S]}E[DP]GGS 1.8099 - 880 1 1.118 120190.8 0.6299999952316284 9282 4852 14122 HBL1_DMSO_200M_050219_2,14136 HBL1_DMSO_200M_050219_2,14136,LNYLTLIGRLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14137 74.723 800.0 225990.0 25 0 32648.0 9146 FFVIFIKHLI 10 179 638.895754384012 1275.776955834824 2 638.8964111208916 MULTI CID FTMS 0 0 0 14122 104120.65625 0.5851901205178376 -1 0.0856170654296875 15 Unmodified _FFVIFIKHLI_ ENSG00000112796|ENST00000371383|ENPP5 11.640296217721598 0.652229146672156 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[R{I|L}]MCSYP 9 7 24.403 0.0 0.0 1.9128 0.0 0.0 0.0 128.2331335156263 128.2331335156263 8.667505541063178 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[R{I|L}]MCSYP 1.9128 - 1089 1 1.118 136084.9 0.8999999761581421 9283 4852 14122 HBL1_DMSO_200M_050219_2,14137 HBL1_DMSO_200M_050219_2,14137,FFVIFIKHLI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14138 74.727 228.0 373220.0 25 0 49766.0 + 37577 TLIRSDAVALV 11 109 579.3486999696968 1156.6828470061937 2 579.3491088747978 MULTI CID FTMS 0 0 0 14122 100928.2265625 0.2866209424323521 -2 0.1522216796875 16 Unmodified _TLIRSDAVALV_ ENSG00000161533|ENST00000293217|ACOX1;nc|ENSG00000161533|Q15067-3|ACOX1;nc|ENSG00000161533|Q15067|ACOX1 23.80106514851385 0.5333463718001408 4 AVA{I|L}V 5 6 42.959 0.0 0.0 3.714 0.0 0.0 685.3753529279312 0.0 685.3753529279312 0.0 25.795158337406903 0.0 0.0 0 0.5 0.0 0.0 0.0 + AVA{I|L}V 3.714 + + 161 1 1.118 70415.5 1.0 9284 4852 14122 HBL1_DMSO_200M_050219_2,14138 HBL1_DMSO_200M_050219_2,14138,TLIRSDAVALV False True TLIRSDAVALV 74.727271 579.349108874798 2149054.75 14122.0 nc|ENSG00000161533|Q15067|ACOX1;;nc|ENSG00000161533|Q15067-3|ACOX1;;ENSG00000161533|ENST00000293217|ACOX1 5.69379472732544 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14139 74.741 800.0 338350.0 25 0 40048.0 -1 0 221 606.3147536028835 1815.92243140885 3 606.6481201052666 MULTI CID FTMS 0 0 0 14122 89238.359375 0.5309281838976514 -1 0.0856170654296875 17 4 {[DA]|[EG]}V{I|L}P{I|L} 6 -1 42.508 0.0 0.0 2.3408 0.0 0.0 0.0 1204.5441119610527 1204.5441119610527 23.483871321837466 0.0 0.0 0.0 0 0.6643943297944485 1.2218487496163564 0.0 0.0 {[DA]|[EG]}V{I|L}P{I|L} 2.3408 - 1217 + 1 1.118 197296.8 0.9200000166893004 9285 4852 14122 HBL1_DMSO_200M_050219_2,14139 HBL1_DMSO_200M_050219_2,14139, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14141 74.745 14.0 3523500.0 25 0 338430.0 + 41335 VPILAPRI 8 53 439.7947231816443 877.5748934300887 2 439.7948791384697 MULTI CID FTMS 0 0 0 14140 3324438.75 0.4124031301533896 2 -0.1427154541015625 1 Unmodified _VPILAPRI_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 30.22481116460888 0.4082965392918993 4 VP{I|L}{I|L}A[RP]{I|L} 8 0 + 61.719 0.0 0.0 7.0329 7.0329 93.251 0.0 0.0 0.0 34.27185445469682 1.726307269461742 1.726307269461742 20.79689690656103 0 0.805462187404089 1.3979400086720375 0.0 0.0 + + VP{I|L}{I|L}A[RP]{I|L};V{I|L}P{I|L}A[RP]{I|L} 7.0329;4.6631 +;- + 39 + 1 1.126 42433.3 1.0 9286 4853 14140 HBL1_DMSO_200M_050219_2,14141 HBL1_DMSO_200M_050219_2,14141,VPILAPRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14142 74.747 11.0 5629500.0 25 0 869950.0 + 18788 LAPLAKVI 8 75 412.7839663047197 823.5533796762394 2 412.7838928103447 MULTI CID FTMS 0 0 0 14140 5254592.5 1.0 0 0.0 2 Unmodified _LAPLAKVI_ ENSG00000105679|ENST00000222286|GAPDHS;ENSG00000111640|ENST00000229239|GAPDH;ENST00000423411.2_1_6:135940529-135940997:-|nuORF;ENST00000455134.1_1_10:93426952-93427153:-|nuORF;ENST00000515281.1_1_11:88141588-88141981:-|nuORF;nc|ENSG00000111640|P04406-2|GAPDH 40.44857923139169 0.2267865117615937 4 [{I|L}A]P{I|L}AKV{I|L} 8 0 + 63.141 0.0 0.0 7.6669 7.6669 92.298 0.0 0.0 0.0 44.44450997407991 13.443350238481033 13.443350238481033 9.771212547196626 0 0.8807196863200843 2.0 0.0 0.0 + + [{I|L}A]P{I|L}AKV{I|L};[{I|L}A]{I|L}PAKV{I|L} 7.6669;6.4804 +;- + 193 + 1 1.126 56682.8 1.0 9287 4853 14140 HBL1_DMSO_200M_050219_2,14142 HBL1_DMSO_200M_050219_2,14142,LAPLAKVI False True LAPLAKVI 74.746584 412.783892810345 148802364.0 14140.0 ENST00000455134.1_1_10:93426952-93427153:-|nuORF;;ENSG00000105679|ENST00000222286|GAPDHS;;nc|ENSG00000111640|P04406-2|GAPDH;;ENSG00000111640|ENST00000229239|GAPDH;;ENST00000515281.1_1_11:88141588-88141981:-|nuORF;;ENST00000423411.2_1_6:135940529-135940997:-|nuORF 4.2429821491241455 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14143 74.748 4.2 24614000.0 25 0 4053500.0 + + 11003 GSIQSIPEI 9 105 472.2586606002652 942.5027682673305 2 472.2585937380791 MULTI CID FTMS 0 0 0 14140 12287395.0 0.6749409782072535 -1 0.1495361328125 3 Unmodified _GASGLSLPEL_ ENSG00000167325|ENST00000300738|RRM1 58.6788170122104 0.0400518768368984 4 [VG]TAGS{I|L} 7 -1 37.105 0.0 0.0 3.9369 0.0 0.0 0.0 354.1673550195366 354.1673550195366 11.163282261788872 0.0 0.0 0.0 0 0.7614393726401688 1.5228787452803376 1.8098943791441968 0.0 [VG]TAGS{I|L} 3.9369 - 579 1 1.126 86377.0 1.0 9288 4853 14140 HBL1_DMSO_200M_050219_2,14143 HBL1_DMSO_200M_050219_2,14143,GASGLSLPEL False False GSIQSIPEI 74.747763 472.258593738079 172393600.0 14140.0 ENSG00000167325|ENST00000300738|RRM1 0.7993788123130798 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14144 74.749 13.0 5706400.0 25 0 690350.0 + 4683 DAYVLPKLYVK 11 71 654.8819054471516 1307.749257961103 2 654.8820678591728 MULTI CID FTMS 0 0 0 14140 3861973.75 0.9983175572280316 1 -0.0354156494140625 4 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 69.33821966488729 0.0343223916712224 4 {[DA]|[EG]}YV{I|L}PK{I|L}YVK 11 0 + 88.243 0.0 0.0 6.7477 6.7477 94.15 0.0 0.0 0.0 56.51632257081043 16.620095109179005 16.620095109179005 73.1199663529115 0 2.20597718523608 1.5228787452803376 0.0 0.3054621874040891 + + {[DA]|[EG]}YV{I|L}PK{I|L}YVK;[{I|L}V]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}Y{[DA]|[EG]}VQ 6.7477;1.1564 +;- + 579 + 1 1.126 61638.5 1.0 9289 4853 14140 HBL1_DMSO_200M_050219_2,14144 HBL1_DMSO_200M_050219_2,14144,DAYVLPKLYVK True True DAYVLPKLYVK 74.74894 654.882067859173 186440236.0 14140.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 9.783442815144856 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14145 74.75 20.0 1806200.0 25 0 426120.0 + -1 WQLTMKKKV 9 53 589.3431502497217 1176.6717475662433 2 589.3431884646416 MULTI CID FTMS 0 0 0 14140 2888350.25 0.8777972786417674 -1 0.1495361328125 5 Oxidation (M) _WQLTM(Oxidation (M))KKKV_ REV__ENST00000466094.5_1_7:107220736-107227893:+|nuORF;REV__ENST00000486326.5_1_7:107220736-107234551:+|nuORF 0.6014990680409731 0.8936861360942873 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.126 31625.2 1.0 9290 4853 14140 HBL1_DMSO_200M_050219_2,14145 HBL1_DMSO_200M_050219_2,14145,WQLTMKKKV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14146 74.751 17.0 3564200.0 25 0 312720.0 + 4687 DAYVLPKLYVK 11 83 436.9237660453603 1307.749468736281 3 436.9236633181572 MULTI CID FTMS 0 0 0 14140 1793549.5 0.645076299252473 -1 0.1495361328125 6 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 22.65808497894818 0.560183898709508 4 [YV]K{I|L}{I|L}AA 7 7 43.945 0.0 0.0 3.3603 0.0 0.0 0.0 546.2491384962997 546.2491384962997 13.47904031556805 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YV]K{I|L}{I|L}AA 3.3603 - 221 1 1.126 55886.6 1.0 9291 4853 14140 HBL1_DMSO_200M_050219_2,14146 HBL1_DMSO_200M_050219_2,14146,DAYVLPKLYVK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14147 74.752 41.0 913860.0 25 0 265150.0 + -1 ADTCIDEKAAP 11 64 595.773460237524 1189.532367541848 2 595.7739745974541 MULTI CID FTMS 0 0 0 14140 1062474.25 0.690237803243027 -1 0.1495361328125 7 Carbamidomethyl (C) _ADTC(Carbamidomethyl (C))IDEKAAP_ REV__ENSG00000121210|ENST00000409959|TMEM131L;REV__nc|ENSG00000121210|A2VDJ0-2|TMEM131L;REV__nc|ENSG00000121210|A2VDJ0-3|TMEM131L;REV__nc|ENSG00000121210|A2VDJ0-6|TMEM131L;REV__nc|ENSG00000121210|A2VDJ0|TMEM131L 7.608950283845883 0.8392484121837455 4 A[TA]V{I|L}{[DA]|[EG]}{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 23.05 0.0 0.0 1.9377 0.0 0.0 287.11201674629064 0.0 287.11201674629064 0.0 6.852190335775745 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 A[TA]V{I|L}{[DA]|[EG]}{[QD]|[EN]|[WG]|[KD]|[RS]} 1.9377 - 174 1 1.126 33119.6 1.0 9292 4853 14140 HBL1_DMSO_200M_050219_2,14147 HBL1_DMSO_200M_050219_2,14147,ADTCIDEKAAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14148 74.754 45.0 1127600.0 25 0 276990.0 + 12953 HAFWGGSVV 9 76 480.2401872780888 958.4658216229776 2 480.2404662966728 MULTI CID FTMS 0 0 0 14140 1074057.125 0.5957937892078305 -1 0.1495361328125 8 Unmodified _HAFWGGSVV_ ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17 42.96799951952854 0.0591636306142405 4 [HA]{M(Oxidation (M))|F}WGGSVV 9 0 + 51.304 0.0 0.0 5.3527 5.3527 79.641 0.0 0.0 0.0 7.147642715192504 35.819328110613355 7.147642715192504 6.478174818886373 0 0.7429928190999391 0.0 0.5 0.0 + + [HA]{M(Oxidation (M))|F}WGGSVV;[HA]{M(Oxidation (M))|F}WNSVV;[HA]{M(Oxidation (M))|F}NWSVV;[HA]{M(Oxidation (M))|F}GGWSVV;[HA][WQ][YG]VV 5.3527;4.6768;4.3627;3.3964;0.24252 +;-;-;-;- + 137 1 1.126 46284.8 1.0 9293 4853 14140 HBL1_DMSO_200M_050219_2,14148 HBL1_DMSO_200M_050219_2,14148,HAFWGGSVV True True HAFWGGSVV 74.753715 480.240466296673 26473256.0 14140.0 nc|ENSG00000132466|O75179-4|ANKRD17;;nc|ENSG00000132466|O75179-7|ANKRD17;;nc|ENSG00000132466|O75179-6|ANKRD17;;nc|ENSG00000132466|O75179-2|ANKRD17;;ENSG00000132466|ENST00000358602|ANKRD17 8.78805923461914 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14149 74.755 27.0 3678000.0 25 0 297520.0 + 152 AALPNVYEV 9 89 488.2611871907103 974.5078214482206 2 488.2608520388603 MULTI CID FTMS 0 0 0 14140 1003339.125 0.0872842684614296 -1 0.1495361328125 9 Unmodified _AALPNVYEV_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 57.47134341890925 0.0274820932774257 4 [NP]VAA{I|L} 6 6 39.53 0.0 0.0 4.0564 0.0 0.0 0.0 406.16139378911424 406.16139378911424 17.338268876465662 0.0 0.0 0.0 0 0.2614393726401688 0.958607314841775 0.0 0.6694451763165201 [NP]VAA{I|L} 4.0564 - 513 1 1.126 79198.4 1.0 9294 4853 14140 HBL1_DMSO_200M_050219_2,14149 HBL1_DMSO_200M_050219_2,14149,AALPNVYEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14150 74.756 47.0 929200.0 25 0 164880.0 43301 WKRRIELPP 9 67 597.8564034796636 1193.6982540261272 2 597.8563720583916 MULTI CID FTMS 0 0 0 14140 939674.9375 0.6338120550767485 -1 0.1495361328125 10 Unmodified _WKRRIELPP_ nc|ENSG00000009950|Q9NP71-6|MLXIPL 0.5247636613948944 0.8963649302248013 4 V 1 9 9.6041 0.0 0.0 0.80457 0.0 0.0 1076.6184256953638 0.0 1076.6184256953638 0.0 9.604093769761874 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.80457 - 1 + 1 1.126 40227.8 1.0 9295 4853 14140 HBL1_DMSO_200M_050219_2,14150 HBL1_DMSO_200M_050219_2,14150,WKRRIELPP False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 14151 74.758 62.0 1288700.0 25 0 184210.0 + 21661 LPLKVIHS 8 65 453.7924634572879 0 453.7923461794853 PEAK CID FTMS 0 0 0 14140 910264.4375 0.0280658987487848 19 -1.6954574584960938 11 Unmodified _LPLKVIHS_ REV__ENSG00000137817|ENST00000569795|PARP6;REV__ENST00000566831.5_1_15:72542421-72543610:-|nuORF;REV__nc|ENSG00000137817|Q2NL67-2|PARP6 21.74664581756881 0.3849600028047819 4 PPP 3 -1 18.94 0.0 0.0 2.0915 0.0 0.0 113.0834286293569 498.30402551822505 611.3874541475819 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PPP 2.0915 - 19 + 1 1.126 68281.6 1.0 9296 4853 14140 HBL1_DMSO_200M_050219_2,14151 HBL1_DMSO_200M_050219_2,14151,LPLKVIHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14152 74.759 45.0 1342700.0 25 0 214740.0 27553 PLAESQMML 9 89 510.2485462096224 1018.4825394860447 2 510.2487975955009 MULTI CID FTMS 0 0 0 14140 867606.8125 0.5270597830907233 -2 0.2351531982421875 12 Unmodified _PLAESQMML_ ENST00000464606.5_1_7:138764227-138764275:-|nuORF 16.942295170755138 0.3780752226737986 4 [{I|L}P]AEVGC 7 5 38.549 0.0 0.0 3.7849 0.0 0.0 0.0 346.1401682304385 346.1401682304385 15.590088361946428 0.0 0.0 0.0 0 0.6989700043360187 1.6989700043360187 0.0 0.0 [{I|L}P]AEVGC 3.7849 - 590 1 1.126 55472.1 1.0 9297 4853 14140 HBL1_DMSO_200M_050219_2,14152 HBL1_DMSO_200M_050219_2,14152,PLAESQMML False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14153 74.76 63.0 842370.0 25 0 283640.0 + + -1 YYYDGDVGNYYY 12 56 777.8069012103231 1553.599249487446 2 777.8071166872978 MULTI CID FTMS 0 0 0 14140 823156.0625 0.0711213479026981 4 -0.3306427001953125 13 Carbamidomethyl (C) _C(Carbamidomethyl (C))DEWWRQCDEK_ ENST00000481281.5_1_1:32757770-32793222:+|nuORF;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENSG00000116478|ENST00000373548|HDAC1 5.296884461304476 0.8501568894076437 4 YY{[YD]|[{M(Oxidation (M))|F}M]}[DG]RNYYY 11 -1 + 49.696 0.0 0.0 3.1988 3.1988 62.203 0.0 0.0 0.0 14.702560294532638 10.550088832413522 10.550088832413522 0.3778856088939974 0 0.7429928190999391 2.0 0.7059771852360797 0.4247425010840047 YY{[YD]|[{M(Oxidation (M))|F}M]}[DG]RNYYY;YY{[YD]|[{M(Oxidation (M))|F}M]}[DG]VGNYYY;YY{[YD]|[{M(Oxidation (M))|F}M]}[RD]GNYYY;[NG]YV[DG]DYYYYY;[NG]Y[RD]DYYYYY;[NG]YV[DG]D[DP]NYYY;[NG]Y[RD]D[DP]NYYY 3.1988;3.1744;2.5038;2.2524;2.2144;1.324;1.284 -;-;-;-;-;-;- 165 1 1.126 45173.9 1.0 9298 4853 14140 HBL1_DMSO_200M_050219_2,14153 HBL1_DMSO_200M_050219_2,14153,CDEWWRQCDEK False False YYYDGDVGNYYY 74.760488 777.807116687298 387017736.0 14140.0 ENST00000481281.5_1_1:32757770-32793222:+|nuORF;;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 6.589619477589925 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14154 74.762 55.0 1180600.0 25 0 144610.0 28038 PNVALTFLEK 10 101 566.3221500012316 1130.6297470692632 2 566.3222534060478 MULTI CID FTMS 0 0 0 14140 798262.0625 0.86194277156304 -1 0.1495361328125 14 Unmodified _PNVALTFLEK_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF;nc|ENSG00000185627|Q9UNM6-2|PSMD13 2.9952420565917617 0.7127817445270067 4 Y 1 10 12.764 0.0 0.0 1.1289 0.0 0.0 949.5553127204336 0.0 949.5553127204336 0.0 3.431904385139992 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1289 - 64 + 1 1.126 55150.1 1.0 9299 4853 14140 HBL1_DMSO_200M_050219_2,14154 HBL1_DMSO_200M_050219_2,14154,PNVALTFLEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14155 74.764 92.0 969710.0 25 0 97323.0 + 32625 SAYEVIKL 8 88 461.7662011254478 921.5178493176955 2 461.7661315798759 MULTI CID FTMS 0 0 0 14140 779113.8125 0.8336271399618276 -1 0.1495361328125 15 Unmodified _SAYEVIKL_ ENSG00000111716|ENST00000350669|LDHB;ENSG00000134333|ENST00000422447|LDHA;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;ENST00000542765.4_1_12:21788478-21790169:-|nuORF;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA 58.6788170122104 0.1149141431586871 4 {[SA]|[TG]}YEV{I|L}K{I|L} 8 0 + 78.216 0.0 0.0 8.4877 8.4877 88.647 0.0 0.0 0.0 26.989700043360187 5.882717068423304 5.882717068423304 5.882717068423304 0 1.3737125054200234 2.0 0.4247425010840047 0.2887254899964357 + + {[SA]|[TG]}YEV{I|L}K{I|L};{[SA]|[TG]}YEV{I|L}{I|L}K 8.4877;7.8494 +;- + 163 + 1 1.126 74569.3 1.0 9300 4853 14140 HBL1_DMSO_200M_050219_2,14155 HBL1_DMSO_200M_050219_2,14155,SAYEVIKL True True SAYEVIKL 74.763919 461.766131579876 5951425.0 14140.0 ENSG00000111716|ENST00000350669|LDHB;;nc|ENSG00000134333|P00338-4|LDHA;;nc|ENSG00000134333|P00338-3|LDHA;;ENST00000542765.4_1_12:21788478-21790169:-|nuORF;;ENSG00000134333|ENST00000422447|LDHA;;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 5.014265855153401 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14156 74.767 156.0 590160.0 25 0 116780.0 + -1 QVFHQCHTPA 10 110 612.7832629412708 1223.5519729493417 2 612.7837402224541 MULTI CID FTMS 0 0 0 14140 627386.625 0.3121158206208658 -3 0.3017578125 16 Carbamidomethyl (C) _QVFHQC(Carbamidomethyl (C))HTPA_ REV__ENST00000436105.1_1_7:43551434-43551587:-|nuORF 17.11289562659939 0.5604042439455784 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[MT]{[C(Carbamidomethyl (C))G]|[NC]}TSV 11 -1 + 57.269 0.0 0.0 4.6805 4.6805 69.255 0.0 0.0 0.0 22.756949776933617 15.070623213458036 15.070623213458036 1.5051499783199065 0 0.8807196863200843 2.0 0.6022338482433752 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[MT]{[C(Carbamidomethyl (C))G]|[NC]}TSV;{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[MT]{[C(Carbamidomethyl (C))G]|[NC]}TSV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}WE[DN]TSV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[MT]{M(Oxidation (M))|F}[NG]SV;{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[MT]{M(Oxidation (M))|F}[NG]SV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[PS]S[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]TSV;{[QV]|[N{I|L}]|[RA]|[KV]}E[PA]S[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]TSV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}W[C(Carbamidomethyl (C))Q][NG]SV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[MT]{[C(Carbamidomethyl (C))G]|[NC]}{[WT]|[RM]};{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[MT]{[C(Carbamidomethyl (C))G]|[NC]}{[WT]|[RM]} 4.6805;4.5575;4.4173;4.2255;4.1025;3.928;3.805;3.247;3.1677;3.0447 -;-;-;-;-;-;-;-;-;- 1128 + 1 1.126 74827.8 1.0 9301 4853 14140 HBL1_DMSO_200M_050219_2,14156 HBL1_DMSO_200M_050219_2,14156,QVFHQCHTPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14157 74.769 71.0 846050.0 25 0 108390.0 + 45738 YYIDCIRQV 9 84 586.7921202112501 1171.5696874893 2 586.7922241091728 MULTI CID FTMS 0 0 0 14140 630027.8125 0.6679030056826231 1 -0.0354156494140625 17 Unmodified _YYIDCIRQV_ ENSG00000169710|ENST00000306749|FASN 22.736283301280096 0.2418982879461534 4 YY{I|L}D[YK]S 7 5 61.347 0.0 0.0 5.2364 0.0 0.0 0.0 236.1042116754516 236.1042116754516 47.86945584613326 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.2887254899964357 0.4247425010840047 YY{I|L}D[YK]S 5.2364 - 150 + 1 1.126 50479.5 1.0 9302 4853 14140 HBL1_DMSO_200M_050219_2,14157 HBL1_DMSO_200M_050219_2,14157,YYIDCIRQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14158 74.771 101.0 707040.0 25 0 128540.0 + 4071 DAMKYTIVV 9 99 520.2780580728389 1038.5415632124775 2 520.2789184451103 MULTI CID FTMS 0 0 0 14140 571454.8125 0.0125027241794282 8 -0.6614608764648438 18 Unmodified _DAMKYTIVV_ ENSG00000152234|ENST00000398752|ATP5F1A;nc|ENSG00000152234|P25705-2|ATP5F1A;nc|ENSG00000152234|P25705-3|ATP5F1A 29.081581746732265 0.1611639662936252 4 {[DA]|[EG]}M[YK]T{I|L}VV 9 0 + 26.19 0.0 0.0 2.5218 2.5218 77.743 0.0 0.0 0.0 3.755116374865505 7.0089166318594565 3.755116374865505 20.341191831486007 0 0.0 0.8860566476931632 0.9247425010840048 0.0 + + {[DA]|[EG]}M[YK]T{I|L}VV;{[MG]|[TS]}[HA][DP]T{I|L}VV;{[SA]|[TG]}[HT][DP]T{I|L}VV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[WD][PG][KP];{[QG]|[NA]}[NP][DP]T{I|L}VV 2.5218;0.56319;0.40941;0.37278;0.18941 +;-;-;-;- + 128 1 1.126 59661.2 1.0 9303 4853 14140 HBL1_DMSO_200M_050219_2,14158 HBL1_DMSO_200M_050219_2,14158,DAMKYTIVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14159 74.773 128.0 574180.0 25 0 123480.0 + 34159 SLMCLNEKI 9 93 350.8484067345535 1049.5233908038606 3 350.8488342165947 MULTI CID FTMS 0 0 0 14140 414812.65625 0.8125164581347288 -1 0.1495361328125 19 Unmodified _SLMCLNEKI_ REV__ENSG00000118307|ENST00000395987|DNAI7;REV__nc|ENSG00000118307|Q6TDU7-2|DNAI7;REV__nc|ENSG00000118307|Q6TDU7-3|DNAI7;REV__nc|ENSG00000118307|Q6TDU7-4|DNAI7;REV__nc|ENSG00000118307|Q6TDU7|DNAI7 12.531546534597751 0.4974689918368763 4 [VG]P 3 -1 23.557 0.0 0.0 2.2445 0.0 0.0 0.0 793.3577621019652 793.3577621019652 7.270909339380985 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VG]P 2.2445 - 47 1 1.126 67889.5 1.0 9304 4853 14140 HBL1_DMSO_200M_050219_2,14159 HBL1_DMSO_200M_050219_2,14159,SLMCLNEKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14160 74.777 151.0 607930.0 25 0 30475.0 + 9987 FPIDHFTHI 9 131 563.78696096798 1125.55936900276 2 563.7873412966728 MULTI CID FTMS 0 0 0 14140 405730.5625 0.9382924629478132 -1 0.1495361328125 20 Unmodified _FPIDHFTHI_ ENSG00000155363|ENST00000369645|MOV10;ENST00000468624.5_1_1:113217534-113241292:+|nuORF;ENST00000496577.5_1_1:113231344-113241292:+|nuORF;nc|ENSG00000155363|Q9HCE1-2|MOV10 65.47368725323818 0.0230515101691092 4 {M(Oxidation (M))|F}P{I|L}DH{M(Oxidation (M))|F}TH{I|L} 9 0 + 73.624 0.0 0.0 6.5411 6.5411 82.158 0.0 0.0 0.0 10.908458057352206 6.725269847947629 6.725269847947629 4.481296909728215 0 1.930265894174725 0.0 0.2887254899964357 0.0 + + {M(Oxidation (M))|F}P{I|L}DH{M(Oxidation (M))|F}TH{I|L};{M(Oxidation (M))|F}P{I|L}D{[VA]|[{I|L}G]}NTH{I|L};{M(Oxidation (M))|F}{I|L}PDH{M(Oxidation (M))|F}TH{I|L};{M(Oxidation (M))|F}P{I|L}DH{M(Oxidation (M))|F}T{I|L}H;{M(Oxidation (M))|F}{I|L}PD{[VA]|[{I|L}G]}NTH{I|L};{M(Oxidation (M))|F}P{I|L}D{[VA]|[{I|L}G]}NT{I|L}H;{M(Oxidation (M))|F}{I|L}PDH{M(Oxidation (M))|F}T{I|L}H;{M(Oxidation (M))|F}P{I|L}D{[VA]|[{I|L}G]}GGTH{I|L};{M(Oxidation (M))|F}{I|L}PD{[VA]|[{I|L}G]}NT{I|L}H;{M(Oxidation (M))|F}{I|L}PD{[VA]|[{I|L}G]}GGTH{I|L} 6.5411;6.1429;6.0453;5.9436;5.6471;5.5454;5.4478;5.3287;5.0496;4.8329 +;-;-;-;-;-;-;-;-;- + 2280 + 1 1.126 77362.9 1.0 9305 4853 14140 HBL1_DMSO_200M_050219_2,14160 HBL1_DMSO_200M_050219_2,14160,FPIDHFTHI True True FPIDHFTHI 74.776511 563.787341296673 9728730.5 14140.0 ENST00000468624.5_1_1:113217534-113241292:+|nuORF;;nc|ENSG00000155363|Q9HCE1-2|MOV10;;ENSG00000155363|ENST00000369645|MOV10;;ENST00000496577.5_1_1:113231344-113241292:+|nuORF 6.390972137451172 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14162 74.781 4.0 12433000.0 25 0 1506000.0 + 3734 DAFRVNVI 8 68 467.2616036647327 932.5086543962652 2 467.2616454958916 MULTI CID FTMS 0 0 0 14161 18460792.0 1.0 0 0.0 1 Unmodified _DAFRVNVI_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 41.8396318013385 0.2035142800366642 4 VNV{I|L} 4 4 37.423 0.0 0.0 4.0131 0.0 0.0 489.23387343574376 0.0 489.23387343574376 0.0 0.6959907598761106 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + VNV{I|L} 4.0131 + + 28 1 1.126 44516.2 1.0 9306 4854 14161 HBL1_DMSO_200M_050219_2,14162 HBL1_DMSO_200M_050219_2,14162,DAFRVNVI False True DAFRVNVI 74.780821 467.261645495892 492241088.0 14161.0 ENST00000487958.5_1_3:183894781-183898060:+|nuORF;;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;;ENSG00000161203|ENST00000292807|AP2M1;;nc|ENSG00000161203|Q96CW1-2|AP2M1;;ENST00000466598.5_1_3:183894781-183896942:+|nuORF 5.40716274579366 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14163 74.782 4.4 11635000.0 25 0 2219800.0 + 25980 NIPVRFIEA 9 63 529.8033631852802 1057.5921734373603 2 529.8040038943291 MULTI CID FTMS 0 0 0 14161 13335043.0 1.0 0 0.0 2 Unmodified _NLPVFWLLG_ ENSG00000095585|ENST00000224337|BLNK;nc|ENSG00000095585|Q8WV28-2|BLNK 13.50788311687929 0.4710407108020397 4 {[QV]|[N{I|L}]|[RA]|[KV]}A{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}R 7 5 53.505 0.0 0.0 5.0591 0.0 0.0 0.0 193.09852014713127 193.09852014713127 27.518572025801543 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}A{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}R 5.0591 - 45 + 1 1.126 46503.1 1.0 9307 4854 14161 HBL1_DMSO_200M_050219_2,14163 HBL1_DMSO_200M_050219_2,14163,NLPVFWLLG False False NIPVRFIEA 74.781998 529.804003894329 88301800.0 14161.0 ENSG00000095585|ENST00000224337|BLNK;;nc|ENSG00000095585|Q8WV28-2|BLNK 4.307655096054077 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14164 74.784 64.0 1317200.0 25 0 291600.0 + 45701 YYDGDIGNYYY 11 84 703.2825654179 1404.5505779025998 2 703.2832519412041 MULTI CID FTMS 0 0 0 14161 2003614.0 0.2633574501666937 3 -0.29522705078125 3 Unmodified _YYDGDIGNYYY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 51.629811660486645 0.1086041609037681 4 YYDGDY{[VA]|[{I|L}G]}NYY 11 2 + 59.786 0.0 0.0 4.2566 4.2566 74.091 0.0 0.0 0.0 23.16901560044257 10.550088832413527 10.550088832413527 5.440680443502757 0 0.6989700043360187 2.0 1.0356668758921828 0.0 YYDGDY{[VA]|[{I|L}G]}NYY;YYDGD{I|L}[NG]YYY;YYDGDY{[VA]|[{I|L}G]}GGYY;YYDGD{I|L}[YG]NYY;YYDG{I|L}D[NG]YYY;YYDGD{I|L}[YG]GGYY;YYDY[DG]{[VA]|[{I|L}G]}NYY;YYDG{I|L}D[YG]NYY;{[YD]|[{M(Oxidation (M))|F}M]}GDYY{[VA]|[{I|L}G]}NYY;{[YD]|[{M(Oxidation (M))|F}M]}YGDY{[VA]|[{I|L}G]}NYY 4.2566;3.8692;3.6067;3.3525;3.1854;2.7026;2.701;2.6687;2.607;2.513 -;+;-;-;-;-;-;-;-;- + 1135 1 1.126 66990.3 1.0 9308 4854 14161 HBL1_DMSO_200M_050219_2,14164 HBL1_DMSO_200M_050219_2,14164,YYDGDIGNYYY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14165 74.785 30.0 1095700.0 25 0 69184.0 + -1 MPYSGMTGAQVI 12 59 627.796250368968 1253.577947804736 2 627.7968627810478 MULTI CID FTMS 0 0 0 14161 2029224.5 1.0 0 0.0 4 Carbamidomethyl (C) _NFYC(Carbamidomethyl (C))DVPQVL_ ENSG00000111816|ENST00000606080|FRK;nc|ENSG00000111816|P42685-2|FRK 13.90604991867851 0.6142120002215601 4 MTGAQV{I|L} 7 -1 56.458 0.0 0.0 4.5038 0.0 0.0 535.2112904279312 0.0 535.2112904279312 0.0 35.24350030035414 0.0 0.0 0 0.8182503180159344 0.0 1.6549471895720984 0.0 MTGAQV{I|L} 4.5038 - 117 1 1.126 34903.5 1.0 9309 4854 14161 HBL1_DMSO_200M_050219_2,14165 HBL1_DMSO_200M_050219_2,14165,NFYCDVPQVL False False MPYSGMTGAQVI 74.784746 627.796862781048 34554336.0 14161.0 ENSG00000111816|ENST00000606080|FRK;;nc|ENSG00000111816|P42685-2|FRK 5.139535109202067 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14166 74.789 219.0 361740.0 25 0 40159.0 + 22287 LPRTSVNLRR 10 115 606.3698872753153 1210.7252216174304 2 606.3699218630791 MULTI CID FTMS 0 0 0 14161 1283612.875 1.0 0 0.0 5 Unmodified _LPRTSVNLRR_ REV__ENSG00000048707|ENST00000620676|VPS13D;REV__nc|ENSG00000048707|Q5THJ4-2|VPS13D 3.944395688203298 0.708391353636983 4 {[DA]|[EG]}{M(Oxidation (M))|F} 3 -1 19.242 0.0 0.0 1.5893 0.0 0.0 0.0 874.5653759965898 874.5653759965898 7.983324797206283 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F} 1.5893 - 74 1 1.126 61425.2 1.0 9310 4854 14161 HBL1_DMSO_200M_050219_2,14166 HBL1_DMSO_200M_050219_2,14166,LPRTSVNLRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14167 74.791 71.0 1185300.0 25 0 80094.0 -1 0 91 586.319769299267 585.312492832667 1 586.3201171755791 MULTI CID FTMS 0 0 0 14161 816304.125 1.0 0 0.0 6 4 {I|L}SQGD 5 -1 44.148 0.0 0.0 7.5426 0.0 0.0 0.0 82.06695734195546 82.06695734195546 17.184859246260714 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 1.2887254899964358 0.25 {I|L}SQGD 7.5426 - 246 + 1 1.126 66443.5 1.0 9311 4854 14161 HBL1_DMSO_200M_050219_2,14167 HBL1_DMSO_200M_050219_2,14167, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14168 74.793 120.0 702810.0 25 0 58890.0 + 2831 AVAELNYGL 9 112 475.25291156758016 948.4912702019604 2 475.2530090212822 MULTI CID FTMS 0 0 0 14161 786248.0625 1.0 0 0.0 7 Unmodified _AVAELNYGL_ ENSG00000198218|ENST00000395443|QRICH1;ENST00000479449.1_1_3:49070551-49094468:-|nuORF 36.04419817259434 0.0971720506436186 4 {[VA]|[{I|L}G]}AE{I|L}N 6 3 26.876 0.0 0.0 2.8335 0.0 0.0 0.0 348.15567384869786 348.15567384869786 8.944094273119966 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 + {[VA]|[{I|L}G]}AE{I|L}N 2.8335 + + 613 1 1.126 68719.8 1.0 9312 4854 14161 HBL1_DMSO_200M_050219_2,14168 HBL1_DMSO_200M_050219_2,14168,AVAELNYGL True True AVAELNYGL 74.793044 475.253009021282 3263989.5 14161.0 ENST00000479449.1_1_3:49070551-49094468:-|nuORF;;ENSG00000198218|ENST00000395443|QRICH1 2.110772132873535 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14169 74.794 51.0 998260.0 25 0 158460.0 -1 GVLCICVSSL 10 87 525.7693621293861 1049.524171325572 2 525.7708007693291 MULTI CID FTMS 0 0 0 14161 659738.875 1.0 0 0.0 8 Carbamidomethyl (C) _GVLC(Carbamidomethyl (C))ICVSSL_ ENST00000397885.2_1_9:2804184-2804304:-|nuORF 32.30548876998284 0.2428506522065767 4 [VG]{I|L}DAS 6 -1 45.679 0.0 0.0 4.3524 0.0 0.0 0.0 504.2235811822876 504.2235811822876 22.034021960761265 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.3807196863200844 0.0 [VG]{I|L}DAS 4.3524 - 132 + 1 1.126 46766.2 1.0 9313 4854 14161 HBL1_DMSO_200M_050219_2,14169 HBL1_DMSO_200M_050219_2,14169,GVLCICVSSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14170 74.796 69.0 840360.0 25 0 74222.0 13422 HLMFIIMV 8 87 502.2769034436342 1002.5392539540684 2 502.7745849490166 MULTI CID FTMS 0 0 0 14161 650020.625 0.592819744283917 9 -0.816558837890625 9 Unmodified _HLMFIIMV_ ENST00000265734.8_1_7:92236875-92236974:-|nuORF 11.114462752807354 0.7467182956244686 4 [EP]{I|L} 3 7 21.427 0.0 0.0 2.1372 0.0 0.0 0.0 660.3363785480715 660.3363785480715 1.3033376849500584 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [EP]{I|L} 2.1372 - 145 1 1.126 50225.9 1.0 9314 4854 14161 HBL1_DMSO_200M_050219_2,14170 HBL1_DMSO_200M_050219_2,14170,HLMFIIMV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14171 74.797 43.0 917380.0 25 0 100770.0 + 25242 MVMETIEKI 9 79 547.2861803226949 1092.5578077121895 2 547.2863647341728 MULTI CID FTMS 0 0 0 14161 625222.8125 0.6209304368147565 2 -0.2208938598632812 10 Unmodified _MVMETIEKI_ ENSG00000115524|ENST00000335508|SF3B1 21.53697664764585 0.2571576504437394 4 {[ET]|[MV]}ME[{I|L}T]EK{I|L} 9 0 + 32.211 0.0 0.0 2.9482 2.9482 77.427 0.0 0.0 0.0 20.7907456434033 9.362915595803017 9.362915595803017 13.979400086720382 0 0.4247425010840047 0.0 0.5 0.0 + + {[ET]|[MV]}ME[{I|L}T]EK{I|L};{[ET]|[MV]}M[KG]{[SA]|[TG]}EK{I|L};{[ET]|[MV]}M[PS][C(Carbamidomethyl (C))K]K{I|L};{[YC]|[HE]}[HS][{I|L}T]EK{I|L} 2.9482;1.6687;1.3254;0.84322 +;-;-;- + 70 + 1 1.126 36918.0 1.0 9315 4854 14161 HBL1_DMSO_200M_050219_2,14171 HBL1_DMSO_200M_050219_2,14171,MVMETIEKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14172 74.802 285.0 480550.0 25 0 59792.0 2885 AVESVYKCD 9 133 338.49230303879983 1012.4550797165996 3 338.4919616580009 MULTI CID FTMS 0 0 0 14161 504576.03125 1.0 0 0.0 11 Unmodified _AVESVYKCD_ ENSG00000164603|ENST00000297145|BMT2 13.90604991867851 0.4602628045680013 4 AAVE 4 7 49.201 0.0 0.0 4.8596 0.0 0.0 0.0 639.2479938412796 639.2479938412796 37.96388461952553 0.0 0.0 0.0 0 0.2302046884880938 1.6989700043360187 0.4247425010840047 0.0 AAVE 4.8596 - 50 + 1 1.126 113685.0 1.0 9316 4854 14161 HBL1_DMSO_200M_050219_2,14172 HBL1_DMSO_200M_050219_2,14172,AVESVYKCD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14173 74.807 243.0 696120.0 25 0 67173.0 38770 TVDFYFEEV 9 148 574.7589706427858 1147.5033883523715 2 574.7597534060478 MULTI CID FTMS 0 0 0 14161 465502.59375 1.0 0 0.0 12 Unmodified _TVDFYFEEV_ ENSG00000196353|ENST00000429747|CPNE4;nc|ENSG00000196353|Q96A23-2|CPNE4 23.1484247019978 0.2366544122328345 4 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VP 6 6 37.976 0.0 0.0 3.3095 0.0 0.0 0.0 502.12433801822505 502.12433801822505 23.99674684468792 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VP 3.3095 - 174 + 1 1.126 134886.2 1.0 9317 4854 14161 HBL1_DMSO_200M_050219_2,14173 HBL1_DMSO_200M_050219_2,14173,TVDFYFEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14174 74.815 450.0 156780.0 25 0 28228.0 13420 HLLWKKRSIL 10 118 647.4093630303961 0 647.4087402224541 PEAK CID FTMS 0 0 0 14161 408983.0625 1.0 0 0.0 13 Unmodified _HLLWKKRSIL_ ENSG00000085760|ENST00000263629|MTIF2 4.3292370932331545 0.3961065659209837 4 V 1 10 6.9897 0.0 0.0 0.54066 0.0 0.0 491.3884149262233 699.3194063775999 1190.7078213038233 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.54066 - 52 + 1 1.126 61079.6 1.0 9318 4854 14161 HBL1_DMSO_200M_050219_2,14174 HBL1_DMSO_200M_050219_2,14174,HLLWKKRSIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14175 74.819 232.0 747430.0 25 0 126780.0 + 20000 LILKDMVKV 9 109 353.5596339483851 1057.6570724453554 3 353.8937866091728 MULTI CID FTMS 0 0 0 14161 412739.6875 1.0 0 0.0 14 Unmodified _LILKDMVKV_ ENSG00000010292|ENST00000315579|NCAPD2;ENST00000535804.1_1_12:6637788-6638275:+|nuORF 49.52724829834842 0.0414064571532091 4 {I|L}{I|L}{I|L}KDMVKV 9 0 + 83.317 0.0 0.0 7.8775 7.8775 79.568 0.0 0.0 0.0 36.478174818886366 0.8715017571889945 0.8715017571889945 0.8715017571889945 0 0.3252574989159953 2.0 0.3252574989159953 0.9802046884880938 + + {I|L}{I|L}{I|L}KDMVKV;{I|L}{I|L}{I|L}KDMVVK;{I|L}{I|L}{I|L}KV[MD]KV;{I|L}{I|L}{I|L}KV[MD]VK;{I|L}{I|L}{I|L}VK[MD]KV;{I|L}{I|L}{I|L}VK[MD]VK;{I|L}{I|L}{I|L}V[SG]MVKV;{I|L}{I|L}{I|L}KV[TP]{M(Oxidation (M))|F}K;{I|L}{I|L}{I|L}V[SG]MVVK;{I|L}{I|L}{I|L}VK[TP]{M(Oxidation (M))|F}K 7.8775;7.7951;7.2015;7.1191;6.7263;6.6439;6.5317;6.4987;6.4493;6.0235 +;-;-;-;-;-;-;-;-;- + 518 + 1 1.126 144812.8 1.0 9319 4854 14161 HBL1_DMSO_200M_050219_2,14175 HBL1_DMSO_200M_050219_2,14175,LILKDMVKV True True LILKDMVKV 74.819385 353.893786609173 4311162.0 14161.0 ENST00000535804.1_1_12:6637788-6638275:+|nuORF;;ENSG00000010292|ENST00000315579|NCAPD2 5.171371936798096 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14176 74.821 93.0 926760.0 25 0 89960.0 + 6124 DSYINVQEI 9 118 540.7641212799386 1079.5136896266772 2 540.7642089724541 MULTI CID FTMS 0 0 0 14161 391803.1875 0.2553281103258706 -2 0.1849517822265625 15 Unmodified _DSYINVQEI_ ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX 65.23502041540118 0.0231836506122253 4 {[DS]|[MA]|[CV]|TT}Y{I|L}NV 6 3 30.367 0.0 0.0 2.813 0.0 0.0 0.0 385.1709521601335 385.1709521601335 13.394440268278736 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.9247425010840048 0.3252574989159953 + {[DS]|[MA]|[CV]|TT}Y{I|L}NV 2.813 + + 356 1 1.126 70155.3 1.0 9320 4854 14161 HBL1_DMSO_200M_050219_2,14176 HBL1_DMSO_200M_050219_2,14176,DSYINVQEI True True DSYINVQEI 74.821435 540.764208972454 11504595.0 14161.0 ENSG00000107290|ENST00000224140|SETX;;nc|ENSG00000107290|Q7Z333-4|SETX;;nc|ENSG00000107290|Q7Z333-3|SETX 5.968684832255046 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14177 74.832 604.0 210090.0 25 0 13815.0 + 18945 LDCIYKVSLY 10 169 608.8193283523632 0 608.8480712771416 PEAK CID FTMS 0 0 0 14161 63106.68359375 0.8533911701835778 1 -0.1072998046875 16 Unmodified _LDCIYKVSLY_ REV__ENSG00000163719|ENST00000296003|MTMR14;REV__ENST00000414996.1_1_3:9710441-9730764:+|nuORF;REV__ENST00000430020.5_1_3:9704013-9725062:+|nuORF;REV__nc|ENSG00000163719|Q8NCE2-2|MTMR14;REV__nc|ENSG00000163719|Q8NCE2-3|MTMR14 9.38312468134398 0.3794934366477728 4 YVQ 3 -1 9.5868 0.0 0.0 0.78863 0.0 0.0 129.04019371468877 693.3719576471311 822.41215136182 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YVQ 0.78863 - 204 + 1 1.126 95595.8 1.0 9321 4854 14161 HBL1_DMSO_200M_050219_2,14177 HBL1_DMSO_200M_050219_2,14177,LDCIYKVSLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14178 74.843 631.0 250310.0 25 0 12994.0 + + 17035 YMGEEKLIASV 11 191 619.8694493507068 1237.7243457682134 2 620.3895141482353 MULTI CID FTMS 0 0 0 -1 0 17 Unmodified _KKLFCAVAVLF_ ENST00000491115.6_1_9:133569178-133574746:+|nuORF;nc|ENSG00000130713|Q13868-3|EXOSC2;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;nc|ENSG00000130713|Q13868-2|EXOSC2;ENSG00000130713|ENST00000372358|EXOSC2;ENST00000463488.1_1_9:133569202-133574940:+|nuORF 6.2057823575117 0.8458686499021061 4 [VS]A{I|L}{[DA]|[EG]}{I|L}AQ{I|L} 10 -1 34.458 0.0 0.0 2.784 0.0 0.0 0.0 253.16990725976987 253.16990725976987 16.632092224831286 0.0 0.0 0.0 0 0.0 0.721246399047171 1.066901560044258 0.0 [VS]A{I|L}{[DA]|[EG]}{I|L}AQ{I|L} 2.784 - 2441 1 1.126 116916.5 1.0 9322 4854 14161 HBL1_DMSO_200M_050219_2,14178 HBL1_DMSO_200M_050219_2,14178,KKLFCAVAVLF False False YMGEEKLIASV 74.843033 620.389514148235 1086848.5 14161.0 ENST00000491115.6_1_9:133569178-133574746:+|nuORF;;nc|ENSG00000130713|Q13868-3|EXOSC2;;ENST00000430138.6_1_9:133569178-133570981:+|nuORF;;nc|ENSG00000130713|Q13868-2|EXOSC2;;ENSG00000130713|ENST00000372358|EXOSC2;;ENST00000463488.1_1_9:133569202-133574940:+|nuORF 3.882514794667562 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14179 74.858 800.0 291270.0 25 0 62372.0 9102 FFLCLQCFTR 10 189 426.54440151753306 1276.6113751527992 3 426.8788940310478 MULTI CID FTMS 0 0 0 14161 156744.1875 1.0 0 0.0 18 Unmodified _FFLCLQCFTR_ ENSG00000276234|ENST00000615182|TADA2A;nc|ENSG00000276234|O75478-2|TADA2A;nc|ENSG00000276234|O75478|TADA2A 36.12702656103203 0.1984647928738587 4 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[MD]M[{M(Oxidation (M))|F}T]{I|L}{I|L} 10 7 + 49.854 0.0 0.0 3.9052 3.9052 64.429 0.0 0.0 0.0 24.66818313016461 0.7133375178436552 0.7133375178436552 0.4710624853235146 0 0.0 1.5228787452803376 1.0010912013506126 0.0 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[MD]M[{M(Oxidation (M))|F}T]{I|L}{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[MD]M{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[MD]M{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[MD]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}T{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}KM[{I|L}A]T{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[MD]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}T{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[MD]M[KQ]A{M(Oxidation (M))|F};{M(Oxidation (M))|F}{M(Oxidation (M))|F}[MD]{I|L}M{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}C(Carbamidomethyl (C))[KA]M{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}[MD]{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}T{I|L} 3.9052;3.8683;3.6914;3.6325;3.4682;3.4556;3.326;3.3068;3.2089;3.071 -;-;-;-;-;-;-;-;-;- 1772 + 1 1.126 190284.8 0.8500000238418579 9323 4854 14161 HBL1_DMSO_200M_050219_2,14179 HBL1_DMSO_200M_050219_2,14179,FFLCLQCFTR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14180 74.872 800.0 288420.0 25 0 40460.0 + 5003 DGVALLKV 8 184 407.75555362237816 813.4965543115563 2 407.7546569705009 MULTI CID FTMS 0 0 0 14161 147829.203125 1.0 0 0.0 19 Unmodified _DGVALLKV_ ENSG00000165271|ENST00000297990|NOL6;ENST00000464829.5_1_9:33462182-33469499:-|nuORF;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-3|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6 39.957323273325 0.2350051964751539 4 [RD]A{I|L}{I|L}KV 7 2 + 43.804 0.0 0.0 5.3846 5.3846 81.122 0.0 0.0 0.0 6.777807052660805 7.911162275480109 6.777807052660805 7.911162275480109 0 1.0356668758921828 0.0 0.0 0.2134679910804404 [RD]A{I|L}{I|L}KV;[RD]A{I|L}{I|L}VK;[RD]VVVKV;[RD]VVVVK 5.3846;4.4121;1.6058;0.63329 -;-;-;- 205 + 1 1.126 180310.6 0.800000011920929 9324 4854 14161 HBL1_DMSO_200M_050219_2,14180 HBL1_DMSO_200M_050219_2,14180,DGVALLKV False True DGVALLKV 74.871837 407.754656970501 1388043.375 14161.0 nc|ENSG00000165271|Q9H6R4-3|NOL6;;ENSG00000165271|ENST00000297990|NOL6;;nc|ENSG00000165271|Q9H6R4-4|NOL6;;nc|ENSG00000165271|Q9H6R4-2|NOL6;;ENST00000464829.5_1_9:33462182-33469499:-|nuORF 7.138620058695476 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14181 74.884 686.0 459170.0 25 0 33498.0 + -1 KMQKTLTKL 9 221 553.8318930252258 1105.6492331172517 2 554.3330566287041 MULTI CID FTMS 0 0 0 14161 133315.234375 0.0243400695785358 5 -0.4922409057617187 20 Oxidation (M) _KM(Oxidation (M))QKTLTKL_ REV__ENSG00000128487|ENST00000395527|SPECC1;REV__ENST00000472876.5_1_17:19912695-20140191:+|nuORF;REV__nc|ENSG00000128487|Q5M775-2|SPECC1;REV__nc|ENSG00000128487|Q5M775-3|SPECC1;REV__nc|ENSG00000128487|Q5M775-4|SPECC1;REV__nc|ENSG00000128487|Q5M775-5|SPECC1 26.268140514670165 0.1969607489560049 4 [{I|L}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L}TK{I|L} 9 -1 + 29.59 0.0 0.0 2.6762 2.6762 75.967 0.0 0.0 0.0 4.190899125762339 -1.989423613636692 -1.989423613636692 11.23579441345575 0 0.7429928190999391 1.0969100130080565 0.2396518287104437 0.5994850021680094 [{I|L}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L}TK{I|L};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}TK{I|L};[{I|L}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YKAKK;[{I|L}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y[QA]KK;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}YKAKK 2.6762;1.66;1.1334;0.34195;0.11718 -;-;-;-;- 3027 1 1.126 233534.8 1.0 9325 4854 14161 HBL1_DMSO_200M_050219_2,14181 HBL1_DMSO_200M_050219_2,14181,KMQKTLTKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14183 74.888 15.0 3667300.0 25 0 374500.0 + 25604 NFLNMSRSM 9 77 550.2546842662894 1098.4948155993786 2 550.2551757693291 MULTI CID FTMS 0 0 0 14182 2837000.5 0.6798182439030235 1 -0.1135940551757812 1 Unmodified _NFLNMSRSM_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 41.95555342248728 0.0647214845423414 4 {I|L}C(Carbamidomethyl (C))SMN{I|L}SR 8 7 45.5 0.0 0.0 4.142 0.0 0.0 119.07413680244296 0.0 119.07413680244296 0.0 34.39031145857106 0.0 0.0 0 1.1069758080123702 0.0 0.0 0.805462187404089 {I|L}C(Carbamidomethyl (C))SMN{I|L}SR 4.142 - 316 1 1.126 46197.3 1.0 9326 4855 14182 HBL1_DMSO_200M_050219_2,14183 HBL1_DMSO_200M_050219_2,14183,NFLNMSRSM True True NFLNMSRSM 74.888125 550.255175769329 57991612.0 14182.0 ENSG00000137959|ENST00000370751|IFI44L;;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 6.403985500335693 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14184 74.889 21.0 2257200.0 25 0 270140.0 + 12456 GTYTGFIKV 9 76 493.2717932528655 984.529033572531 2 493.2715331912041 MULTI CID FTMS 0 0 0 14182 2185562.25 0.532585123923643 1 -0.1135940551757812 2 Unmodified _GTYTGFIKV_ ENSG00000266094|ENST00000579436|RASSF5;nc|ENSG00000266094|Q8WWW0-2|RASSF5;nc|ENSG00000266094|Q8WWW0-3|RASSF5 34.40172386719151 0.1061884637610825 4 {[SA]|[TG]}YT 4 5 37.567 0.0 0.0 3.8157 0.0 0.0 0.0 559.3260701312847 559.3260701312847 15.425267103446656 0.0 0.0 0.0 0 0.6139829889124311 1.5228787452803376 0.0 0.0 + {[SA]|[TG]}YT 3.8157 + + 112 + 1 1.126 40798.4 1.0 9327 4855 14182 HBL1_DMSO_200M_050219_2,14184 HBL1_DMSO_200M_050219_2,14184,GTYTGFIKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14185 74.89 21.0 2552500.0 25 0 320900.0 + 5554 DMLQQLHSV 9 81 535.7685309678717 1069.5225090025433 2 535.7688476443291 MULTI CID FTMS 0 0 0 14182 2342752.5 0.5866398014178501 1 -0.1135940551757812 3 Unmodified _DMLQQLHSV_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000562407.1_1_16:23695226-23699079:+|nuORF 74.92900055777586 0.0191935851694334 4 [MD]{I|L}QQ[HV]S{I|L} 9 2 + 64.342 0.0 0.0 6.016 6.016 84.518 0.0 0.0 0.0 39.946501976996494 1.144680385353439 1.144680385353439 9.030899869919438 0 0.7742275032520141 2.0 1.4258337024346173 1.0 [MD]{I|L}QQ[HV]S{I|L};[MD]{I|L}Q[HV]QS{I|L};[MD]{I|L}[AG]Q[HV]S{I|L};[MD]{I|L}Q{[NV]|[RG]}[HT]{I|L};[MD]{I|L}Q[AG][HV]S{I|L};[MD]{I|L}[AG][HV]QS{I|L};[MD]{I|L}Q[HV][AG]S{I|L};[Q{I|L}]QH{I|L}SV[MD];[Q{I|L}]HQ{I|L}SV[MD];[H{I|L}]QQ{I|L}SV[MD] 6.016;5.1716;5.155;4.7663;4.6875;4.3106;3.8431;2.0519;1.9351;1.6031 -;-;-;-;-;-;-;-;-;- 425 + 1 1.126 46882.1 1.0 9328 4855 14182 HBL1_DMSO_200M_050219_2,14185 HBL1_DMSO_200M_050219_2,14185,DMLQQLHSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14186 74.892 29.0 1829600.0 25 0 448770.0 + 45724 YYFDYKEQL 9 52 634.7954130781385 1267.576273223077 2 634.7957641482353 MULTI CID FTMS 0 0 0 14182 1514726.875 0.407880095827368 1 -0.1135940551757812 4 Unmodified _YYFDYKEQL_ ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF 22.736283301280096 0.2418982879461534 4 YY{M(Oxidation (M))|F}DY 5 4 46.466 0.0 0.0 3.6657 0.0 0.0 0.0 513.2689913385374 513.2689913385374 14.325899953472645 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YY{M(Oxidation (M))|F}DY 3.6657 + + 275 + 1 1.126 46143.8 1.0 9329 4855 14182 HBL1_DMSO_200M_050219_2,14186 HBL1_DMSO_200M_050219_2,14186,YYFDYKEQL False True YYFDYKEQL 74.89166 634.795764148235 51954484.0 14182.0 ENSG00000099341|ENST00000215071|PSMD8;;ENST00000592001.5_1_19:38865430-38871817:+|nuORF 6.169924736022949 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14187 74.893 40.0 1331400.0 25 0 112260.0 + 26721 NYVPEVSAL 9 88 496.25850232938905 990.502451725578 2 496.2584106326103 MULTI CID FTMS 0 0 0 14182 1073066.375 0.565406333331599 1 -0.1135940551757812 5 Unmodified _NYVPEVSAL_ ENSG00000182774|ENST00000647841|RPS17;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF 21.74664581756881 0.2544899275067181 4 [YN]V 3 6 30.7 0.0 0.0 3.0994 0.0 0.0 0.0 611.3040727450558 611.3040727450558 0.4615940856592893 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3252574989159953 + [YN]V 3.0994 + + 183 1 1.126 46563.6 1.0 9330 4855 14182 HBL1_DMSO_200M_050219_2,14187 HBL1_DMSO_200M_050219_2,14187,NYVPEVSAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14188 74.895 87.0 379450.0 25 0 37594.0 45660 YVRRRLTAE 9 65 582.335248833607 1162.655944734014 2 582.3351928591728 MULTI CID FTMS 0 0 0 14182 1013303.3125 0.804269298371981 1 -0.1135940551757812 6 Unmodified _YVRRRLTAE_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 2.302733041254933 0.8342969208511092 4 {I|L} 1 8 10.596 0.0 0.0 0.91136 0.0 0.0 1031.5608805023717 0.0 1031.5608805023717 0.0 6.616531951875668 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.91136 + + 17 + 1 1.126 30366.1 1.0 9331 4855 14182 HBL1_DMSO_200M_050219_2,14188 HBL1_DMSO_200M_050219_2,14188,YVRRRLTAE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14189 74.896 57.0 1243500.0 25 0 156130.0 25912 NLLECYANV 9 97 519.7508655202303 1037.4871781072604 2 519.7515746951103 MULTI CID FTMS 0 0 0 14182 899994.0 0.4127726940787018 -1 0.1072998046875 7 Unmodified _NLLECYANV_ ENST00000409185.5_1_2:131806798-131807053:-|nuORF 19.256988751693697 0.3154191944385105 4 {[QV]|[N{I|L}]|[RA]|[KV]}T[MT][DG]TSV 10 7 + 40.535 0.0 0.0 3.9071 3.9071 78.648 0.0 0.0 0.0 10.301368141678118 3.9363617813594303 3.9363617813594303 10.013939875580313 0 0.3807196863200844 2.0 0.7396518287104438 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}T[MT][DG]TSV;{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))M]T{I|L}TSV;{[QV]|[N{I|L}]|[RA]|[KV]}TT[YR]C[PA];{[QV]|[N{I|L}]|[RA]|[KV]}T[MT][DG]{[WT]|[RM]};{[QV]|[N{I|L}]|[RA]|[KV]}T[MT][WC(Carbamidomethyl (C))]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[YG][DG]{[WT]|[RM]};{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))M][R{M(Oxidation (M))|F}]VV;{[QV]|[N{I|L}]|[RA]|[KV]}TT[HM][PG][PA];{[QV]|[N{I|L}]|[RA]|[KV]}T[MT][WM]AA;{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))M]T{I|L}{[WT]|[RM]} 3.9071;2.9418;2.5789;2.2793;2.1945;2.0371;1.7552;1.6913;1.6655;1.3193 -;-;-;-;-;-;-;-;-;- 338 + 1 1.126 59611.1 1.0 9332 4855 14182 HBL1_DMSO_200M_050219_2,14189 HBL1_DMSO_200M_050219_2,14189,NLLECYANV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14190 74.897 46.0 1758700.0 25 0 198990.0 + 1767 ALRRQKQV 8 113 499.81607843687897 997.617603940558 2 499.8161193728447 MULTI CID FTMS 0 0 0 14182 806413.5 0.1806961930297789 3 -0.27862548828125 8 Unmodified _ALRRQKQV_ REV__ENSG00000172238|ENST00000306011|ATOH1 26.34127834903884 0.4900704351052977 4 [{I|L}A]AT{I|L}A{I|L}VN{I|L} 10 -1 + 41.792 0.0 0.0 4.1892 4.1892 79.771 0.0 0.0 0.0 10.554621874040894 5.566884185923655 5.566884185923655 10.554621874040894 0 1.024227503252014 2.0 0.0 0.0 [{I|L}A]AT{I|L}A{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}A{I|L}VN{I|L};AA{I|L}T{I|L}A{I|L}VN{I|L};[{I|L}A]AT{I|L}V[{I|L}A]N{I|L};[{I|L}V][SG]{I|L}A{I|L}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}V[{I|L}A]N{I|L};{[VA]|[{I|L}G]}[VS]{I|L}A{I|L}VN{I|L};AA{I|L}T{I|L}V[{I|L}A]N{I|L};[TA][{I|L}A]{I|L}A{I|L}VN{I|L};[VS]{[VA]|[{I|L}G]}{I|L}A{I|L}VN{I|L} 4.1892;3.1312;2.7637;2.389;1.9185;1.3311;1.2422;0.96353;0.87979;0.73331 -;-;-;-;-;-;-;-;-;- 703 1 1.126 66162.2 1.0 9333 4855 14182 HBL1_DMSO_200M_050219_2,14190 HBL1_DMSO_200M_050219_2,14190,ALRRQKQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14191 74.901 211.0 690880.0 25 0 158000.0 + 9988 FPIDHFTHI 9 127 376.194669990108 1125.562180570524 3 376.1942932009697 MULTI CID FTMS 0 0 0 14182 623040.6875 0.6427998735118491 1 -0.1135940551757812 9 Unmodified _FPIDHFTHI_ ENSG00000155363|ENST00000369645|MOV10;ENST00000468624.5_1_1:113217534-113241292:+|nuORF;ENST00000496577.5_1_1:113231344-113241292:+|nuORF;nc|ENSG00000155363|Q9HCE1-2|MOV10 57.72198328787511 0.0273433238377839 4 {M(Oxidation (M))|F}P{I|L}DH{M(Oxidation (M))|F}TH{I|L} 9 0 + 80.438 0.0 0.0 7.1465 7.1465 82.556 0.0 0.0 0.0 7.931825014007217 3.357921019231924 3.357921019231924 3.357921019231924 0 0.5629529932484498 0.0 1.3996498648046138 0.0 + + {M(Oxidation (M))|F}P{I|L}DH{M(Oxidation (M))|F}TH{I|L};{M(Oxidation (M))|F}P{I|L}DH{M(Oxidation (M))|F}T{I|L}H;{M(Oxidation (M))|F}{I|L}PDH{M(Oxidation (M))|F}TH{I|L};[{I|L}P]D{[QS]|[NT]}{I|L}D{I|L}PE;{M(Oxidation (M))|F}{I|L}PDH{M(Oxidation (M))|F}T{I|L}H;[{I|L}P]DH{M(Oxidation (M))|F}TH{I|L}{M(Oxidation (M))|F};[{I|L}P]D{[QS]|[NT]}D{I|L}{I|L}PE;[{I|L}P]D{[QS]|[NT]}{I|L}DP{I|L}E;[{I|L}P]D{[QS]|[NT]}D{I|L}P{I|L}E;[{I|L}P]D[C(Carbamidomethyl (C))K]PH{I|L}{M(Oxidation (M))|F} 7.1465;6.8482;6.4888;6.4418;6.1905;5.9394;5.8118;5.7841;5.1541;4.2781 +;-;-;-;-;-;-;-;-;- + 1128 + 1 1.126 123986.6 1.0 9334 4855 14182 HBL1_DMSO_200M_050219_2,14191 HBL1_DMSO_200M_050219_2,14191,FPIDHFTHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14192 74.906 221.0 767180.0 25 0 48828.0 + 32095 RVLPSIVNEV 10 150 563.3350569643509 1124.6555609955017 2 563.3354980349541 MULTI CID FTMS 0 0 0 14182 524874.8125 0.7099153004300408 -1 0.1072998046875 10 Unmodified _RVLPSIVNEV_ ENSG00000215021|ENST00000535923|PHB2;ENST00000543465.5_1_12:7077022-7079730:-|nuORF;ENST00000544888.5_1_12:7077022-7079603:-|nuORF;nc|ENSG00000215021|Q99623-2|PHB2 51.41523569358685 0.0718446036348414 4 {[TV]|[{I|L}S]}P[RV]{I|L}VNEV 10 4 + 50.64 0.0 0.0 4.5028 4.5028 72.17 0.0 0.0 0.0 3.283861622707825 13.999843964722096 3.283861622707825 3.283861622707825 0 0.5554621874040891 1.0969100130080565 0.9916440611282626 0.0 {[TV]|[{I|L}S]}P[RV]{I|L}VNEV;[{I|L}P]S[RV]{I|L}VNEV;{[TV]|[{I|L}S]}P[RV]{I|L}VGGEV;[{I|L}P]S[RV]{I|L}VGGEV;[PS]{I|L}[RV]{I|L}VNEV;[PS]{I|L}[RV]{I|L}VGGEV;[K{I|L}][RH]{I|L}[KC]EV 4.5028;4.2108;3.6879;3.3959;2.9678;2.1529;0.043937 -;-;-;-;-;-;- 2163 1 1.126 134739.9 1.0 9335 4855 14182 HBL1_DMSO_200M_050219_2,14192 HBL1_DMSO_200M_050219_2,14192,RVLPSIVNEV True True RVLPSIVNEV 74.905643 563.335498034954 12865241.0 14182.0 ENST00000544888.5_1_12:7077022-7079603:-|nuORF;;ENSG00000215021|ENST00000535923|PHB2;;nc|ENSG00000215021|Q99623-2|PHB2;;ENST00000543465.5_1_12:7077022-7079730:-|nuORF 6.074443976084392 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14193 74.91 227.0 511710.0 25 0 50086.0 39803 VESFSSSTR 9 122 333.8295531955782 998.4668301869348 3 333.8289672732353 MULTI CID FTMS 0 0 0 14182 379841.53125 1.0 0 0.0 11 Unmodified _VESFSSSTR_ ENSG00000146166|ENST00000370657|LGSN 20.453626601364224 0.2830276176381075 4 {NN|[MP]|[D{I|L}]|[EV]}YAVYQQ 8 7 + 29.056 0.0 0.0 2.91 2.91 68.513 0.0 0.0 0.0 10.996018674387289 5.368682874162811 5.368682874162811 4.035736119362436 0 0.1822333069283654 0.7695510786217261 0.2614393726401688 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}YAVYQQ;{NN|[MP]|[D{I|L}]|[EV]}Y[YV]AQQ;{NN|[MP]|[D{I|L}]|[EV]}E[QP]AAQQ;{NN|[MP]|[D{I|L}]|[EV]}Y[TP]YEV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[KC]VYEV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GNRYQQ;[YK]P[YN]SEV;[{M(Oxidation (M))|F}V]YQQ{[ES]|[DT]|[{I|L}C]}V;[{M(Oxidation (M))|F}V]YA{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}V;[{M(Oxidation (M))|F}V]AA[YN]{[ES]|[DT]|[{I|L}C]}V 2.91;2.5058;2.2087;1.7974;1.5205;1.058;0.94173;0.79221;0.74098;0.66167 -;-;-;-;-;-;-;-;-;- 222 1 1.126 95858.2 1.0 9336 4855 14182 HBL1_DMSO_200M_050219_2,14193 HBL1_DMSO_200M_050219_2,14193,VESFSSSTR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14194 74.919 494.0 550880.0 25 0 44630.0 + 996 AFYDPTHAW 9 216 554.2479670169186 1106.481381100637 2 554.2484619021416 MULTI CID FTMS 0 0 0 14182 342114.96875 0.8203536856151844 -1 0.1072998046875 12 Unmodified _AFYDPTHAW_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 44.40701690623563 0.0526327925666318 4 M[YK]YDA{[CT]|[{M(Oxidation (M))|F}G]}{I|L} 9 7 + 35.393 0.0 0.0 3.1987 3.1987 62.708 0.0 0.0 0.0 5.493919356110645 0.5598313506683184 0.5598313506683184 0.5598313506683184 0 0.2887254899964357 0.0 0.91944517631652 0.0 M[YK]YDA{[CT]|[{M(Oxidation (M))|F}G]}{I|L};M[YK]YDR[MT];M[YK]YDA{[MS]|[{M(Oxidation (M))|F}A]}V;M[YK]YAD{[CT]|[{M(Oxidation (M))|F}G]}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}HTPDY{[CP]|[EA]};M[YK]AYD{[CT]|[{M(Oxidation (M))|F}G]}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}QTPDY{[CP]|[EA]};M[YK]YAD{[MS]|[{M(Oxidation (M))|F}A]}V;{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}[KG]DY{[CP]|[EA]};MT{[MS]|[{M(Oxidation (M))|F}A]}YSA{[CT]|[{M(Oxidation (M))|F}G]}{I|L} 3.1987;3.1481;2.949;2.839;2.7021;2.6771;2.668;2.5894;2.5804;2.5741 -;-;-;-;-;-;-;-;-;- 3333 + 1 1.126 203827.4 1.0 9337 4855 14182 HBL1_DMSO_200M_050219_2,14194 HBL1_DMSO_200M_050219_2,14194,AFYDPTHAW True True AFYDPTHAW 74.918639 554.248461902142 7048811.5 14182.0 nc|ENSG00000154473|O43684-2|BUB3;;ENSG00000154473|ENST00000368865|BUB3 8.046998659769693 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14195 74.923 217.0 664020.0 25 0 57244.0 + 39173 TYPENWRAF 9 164 592.2797722381288 1182.5449915430574 2 592.2800170779228 MULTI CID FTMS 0 0 0 14182 311838.875 0.674537406722402 1 -0.1135940551757812 13 Unmodified _TYPENWRAF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 29.081581746732265 0.1611639662936252 4 [YT]PEN 5 4 50.145 0.0 0.0 4.2404 0.0 0.0 0.0 575.2733826204217 575.2733826204217 24.542067978438453 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.3252574989159953 0.3807196863200844 + [YT]PEN 4.2404 + + 2559 + 1 1.126 111336.6 1.0 9338 4855 14182 HBL1_DMSO_200M_050219_2,14195 HBL1_DMSO_200M_050219_2,14195,TYPENWRAF False True TYPENWRAF 74.922762 592.280017077923 8117390.0 14182.0 ENSG00000254772|ENST00000329251|EEF1G;;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;;nc|ENSG00000254772|P26641-2|EEF1G 6.078349272410075 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14196 74.925 93.0 545860.0 25 0 55448.0 + 31113 RLLPPGAVVAV 11 73 546.3502851266338 1090.6860173200675 2 546.3508178591728 MULTI CID FTMS 0 0 0 14182 288320.5625 0.5333221654424762 -2 0.1427154541015625 14 Unmodified _RLLPPGAVVAV_ ENSG00000142544|ENST00000421832|CTU1 21.53697664764585 0.586507868110548 4 AVVAV 5 6 31.343 0.0 0.0 2.8737 0.0 0.0 633.396287986525 0.0 633.396287986525 0.0 18.57865760703925 0.0 0.0 0 0.9124379954164592 0.0 0.0 0.0 + AVVAV 2.8737 + + 38 1 1.126 48924.1 1.0 9339 4855 14182 HBL1_DMSO_200M_050219_2,14196 HBL1_DMSO_200M_050219_2,14196,RLLPPGAVVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14197 74.937 684.0 124470.0 25 0 23471.0 -1 0 74 1163.457987468611 3487.352133006033 3 1163.798510730267 MULTI CID FTMS 0 0 0 14182 234125.53125 0.001911788286012 29 -2.7116622924804688 15 4 Y 1 -1 6.9897 0.0 0.0 0.20043 0.0 0.0 1311.4665872070084 2009.835068405828 3321.301655612837 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.20043 - 49 + 1 1.126 70253.5 1.0 9340 4855 14182 HBL1_DMSO_200M_050219_2,14197 HBL1_DMSO_200M_050219_2,14197, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14198 74.947 586.0 408450.0 25 0 17735.0 + 17839 KQLDDLKVEL 10 238 600.8453419844042 1199.6761310356085 2 600.8455078005791 MULTI CID FTMS 0 0 0 14182 217839.0 0.0008105975503706 40 -3.8931884765625 16 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 66.68293810318366 0.0190556348240626 4 {[QN]|[E{I|L}]|[KN]}KN{NN|[MP]|[D{I|L}]|[EV]}KVE{I|L} 10 3 + 57.727 0.0 0.0 4.8119 4.8119 67.576 0.0 0.0 0.0 4.48524958084689 16.532125137753432 4.48524958084689 0.3910699807951161 0 0.9604093769761876 0.6777807052660807 1.112381760723359 0.0 {[QN]|[E{I|L}]|[KN]}KN{NN|[MP]|[D{I|L}]|[EV]}KVE{I|L};{[QN]|[E{I|L}]|[KN]}KN{NN|[MP]|[D{I|L}]|[EV]}VKE{I|L};{[QN]|[E{I|L}]|[KN]}K[DV]QKVE{I|L};{[QN]|[E{I|L}]|[KN]}K[DV]QVKE{I|L};{[QN]|[E{I|L}]|[KN]}DVKQKVE{I|L};{[QN]|[E{I|L}]|[KN]}DVKQVKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}KQKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}D{I|L}KQVKE{I|L};{NN|[MP]|[D{I|L}]|[EV]}EVKQKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}EVKQVKE{I|L} 4.8119;4.7793;4.5833;4.5507;4.5037;4.4711;4.438;4.4054;4.3653;4.3327 -;-;-;-;-;-;-;-;-;- 12560 1 1.126 170528.2 1.0 9341 4855 14182 HBL1_DMSO_200M_050219_2,14198 HBL1_DMSO_200M_050219_2,14198,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14199 74.962 800.0 405970.0 25 0 67304.0 -1 0 171 410.230402942446 409.223126475846 1 410.2296020388603 MULTI CID FTMS 0 0 0 14182 180116.484375 0.4943134541433985 1 -0.1135940551757812 17 4 {M(Oxidation (M))|F}V 2 -1 13.979 0.0 0.0 3.4161 0.0 0.0 145.11145998157463 0.0 145.11145998157463 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}V 3.4161 - 36 + 1 1.126 250946.8 0.8899999856948853 9342 4855 14182 HBL1_DMSO_200M_050219_2,14199 HBL1_DMSO_200M_050219_2,14199, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14200 74.974 664.0 305590.0 25 0 15332.0 37589 TLKCIRWSL 9 199 560.3224757981357 0 560.3230468630791 PEAK CID FTMS 0 0 0 14182 147293.484375 0.2254736778356401 -4 0.37786865234375 18 Unmodified _TLKCIRWSL_ ENSG00000162341|ENST00000294309|TPCN2;ENST00000442692.2_1_11:68822646-68853210:+|nuORF;ENST00000535009.5_1_11:68816453-68846494:+|nuORF 25.399314129420983 0.152124705672316 4 T{I|L}T 3 7 10.49 0.0 0.0 0.93772 0.0 0.0 158.05076726351734 642.3795260065061 800.4302932700234 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T{I|L}T 0.93772 - 990 + 1 1.126 156027.9 1.0 9343 4855 14182 HBL1_DMSO_200M_050219_2,14200 HBL1_DMSO_200M_050219_2,14200,TLKCIRWSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14201 74.985 652.0 323450.0 25 0 21689.0 16412 IYTMRNKEV 9 206 577.304532675696 1152.594512418192 2 577.3066894412041 MULTI CID FTMS 0 0 0 14182 169858.8125 0.5607833722407856 1 -0.1135940551757812 19 Unmodified _IYTMRNKEV_ ENSG00000204694|ENST00000377149|OR11A1 37.97399986684836 0.0865783450051559 4 {I|L}PYT{M(Oxidation (M))|F}P{[DA]|[EG]}{I|L} 9 5 56.309 0.0 0.0 4.8854 0.0 0.0 0.0 132.04598413638908 132.04598413638908 26.05535004434152 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.4247425010840047 0.0 {I|L}PYT{M(Oxidation (M))|F}P{[DA]|[EG]}{I|L} 4.8854 - 4309 + 1 1.126 158601.6 1.0 9344 4855 14182 HBL1_DMSO_200M_050219_2,14201 HBL1_DMSO_200M_050219_2,14201,IYTMRNKEV True False YQIAEQFRV 74.984933 577.306689441204 2275159.75 14182.0 ENST00000595858.5_1_19:19032475-19037138:+|nuORF;;ENSG00000105671|ENST00000247003|DDX49 0.7209079464276632 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14202 74.997 641.0 219910.0 25 0 25438.0 + + 16801 HVIENIYLPAA 11 155 619.8694493507068 1237.7243457682134 2 619.8710204958916 MULTI CID FTMS 0 0 0 14182 145354.125 0.7799613048755253 -1 0.1072998046875 20 Unmodified _KGLVHSSIKRN_ ENSG00000198836|ENST00000361510|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313-2|OPA1;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313|OPA1;nc|ENSG00000198836|O60313-11|OPA1 5.296884461304476 0.8501568894076437 4 [HV]{I|L}NE{I|L}Y{I|L} 8 -1 29.57 0.0 0.0 2.389 0.0 0.0 0.0 253.1718414149665 253.1718414149665 14.292744039348072 0.0 0.0 0.0 0 0.0 0.6777807052660807 0.3252574989159953 0.4247425010840047 [HV]{I|L}NE{I|L}Y{I|L} 2.389 - 648 1 1.126 105636.8 1.0 9345 4855 14182 HBL1_DMSO_200M_050219_2,14202 HBL1_DMSO_200M_050219_2,14202,KGLVHSSIKRN False False HVIENIYLPAA 74.997301 619.871020495892 225933.65625 14182.0 ENSG00000198836|ENST00000361510|OPA1;;nc|ENSG00000198836|O60313-9|OPA1;;nc|ENSG00000198836|O60313-2|OPA1;;nc|ENSG00000198836|O60313-13|OPA1;;nc|ENSG00000198836|O60313|OPA1;;nc|ENSG00000198836|O60313-11|OPA1 4.407775084177653 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14204 75.002 14.0 3960000.0 25 0 715320.0 + 39582 VCTPRLLL 8 63 457.77859267541527 0 457.7785522341728 PEAK CID FTMS 0 0 0 14203 4826203.5 1.0 0 0.0 1 Unmodified _VCTPRLLL_ REV__ENST00000489327.1_1_2:69705990-69736406:-|nuORF 21.74664581756881 0.3849600028047819 4 {I|L}MA 3 -1 16.471 0.0 0.0 1.803 0.0 0.0 131.0966007787618 464.2633783913804 595.3599791701422 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {I|L}MA 1.803 - 32 + 1 1.127 50591.2 1.0 9346 4856 14203 HBL1_DMSO_200M_050219_2,14204 HBL1_DMSO_200M_050219_2,14204,VCTPRLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14205 75.014 701.0 199430.0 25 0 28385.0 43747 YEALIKSLKVL 11 180 638.895754384012 1275.776955834824 2 639.3976318240166 MULTI CID FTMS 0 0 0 14203 39430.77734375 0.2727161049241214 1 -0.0743331909179687 2 Unmodified _YEALIKSLKVL_ ENSG00000173093|ENST00000308208|CCDC63;ENST00000550317.1_1_12:111284592-111319020:+|nuORF;nc|ENSG00000173093|Q8NA47-2|CCDC63 9.38312468134398 0.8308777417566128 4 [{I|L}P]AKVM 6 8 21.638 0.0 0.0 1.6961 0.0 0.0 0.0 633.3864888760926 633.3864888760926 9.855423210374088 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}P]AKVM 1.6961 - 1120 1 1.127 105938.2 1.0 9347 4856 14203 HBL1_DMSO_200M_050219_2,14205 HBL1_DMSO_200M_050219_2,14205,YEALIKSLKVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14206 75.015 7.3 7171000.0 25 0 761600.0 + 21568 LPFGKVTNL 9 69 494.7947335909252 987.5749142486504 2 494.7952148318291 MULTI CID FTMS 0 0 0 14203 6819226.0 0.7568578885752097 -1 0.1135940551757812 3 Unmodified _LPKIYQNL_ ENSG00000011304|ENST00000356948|PTBP1;nc|ENSG00000011304|P26599-1|PTBP1;ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-1|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-2|PTBP1;nc|ENSG00000119314|O95758|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;ENST00000590887.5_1_19:797434-804304:+|nuORF 34.18733598223924 0.3315367612694167 4 {I|L}P{M(Oxidation (M))|F} 3 6 50.005 0.0 0.0 5.0634 0.0 0.0 0.0 627.3434668892537 627.3434668892537 29.79359965382894 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}P{M(Oxidation (M))|F} 5.0634 - 199 + 1 1.127 45460.9 1.0 9348 4856 14203 HBL1_DMSO_200M_050219_2,14206 HBL1_DMSO_200M_050219_2,14206,LPKIYQNL False False LPFGKVTNL 75.01509 494.795214831829 62940784.0 14203.0 ENSG00000011304|ENST00000356948|PTBP1;;nc|ENSG00000011304|P26599-1|PTBP1;;ENSG00000119314|ENST00000374257|PTBP3;;nc|ENSG00000119314|O95758-4|PTBP3;;nc|ENSG00000119314|O95758-1|PTBP3;;nc|ENSG00000119314|O95758-5|PTBP3;;ENST00000586944.5_1_19:797434-805231:+|nuORF;;nc|ENSG00000011304|P26599-2|PTBP1;;nc|ENSG00000119314|O95758|PTBP3;;nc|ENSG00000119314|O95758-2|PTBP3;;ENST00000590887.5_1_19:797434-804304:+|nuORF 2.764477570851644 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14207 75.016 28.0 1867000.0 25 0 209100.0 + 952 AFLEQAVSY 9 88 514.2586442818518 1026.5027356305036 2 514.2585937380791 MULTI CID FTMS 0 0 0 14203 1778752.25 1.0 0 0.0 4 Unmodified _AFLEQAVSY_ ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693|LPIN1 34.10243960390752 0.1078313939113124 4 A{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Y 5 5 27.167 0.0 0.0 2.6466 0.0 0.0 367.1749290892911 0.0 367.1749290892911 0.0 15.573193899842437 0.0 0.0 0 0.0 0.0 0.0 0.0 A{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}Y 2.6466 - 257 + 1 1.127 46577.6 1.0 9349 4856 14203 HBL1_DMSO_200M_050219_2,14207 HBL1_DMSO_200M_050219_2,14207,AFLEQAVSY True True AFLEQAVSY 75.01627 514.258593738079 15215119.0 14203.0 nc|ENSG00000134324|Q14693|LPIN1;;nc|ENSG00000134324|Q14693-4|LPIN1;;nc|ENSG00000134324|Q14693-5|LPIN1;;nc|ENSG00000134324|Q14693-7|LPIN1;;ENSG00000134324|ENST00000674199|LPIN1;;nc|ENSG00000134324|Q14693-2|LPIN1 4.554717699686687 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14208 75.017 43.0 1531300.0 25 0 161790.0 + 32145 RVPSALVTL 9 71 478.3003938435027 954.5862347538056 2 478.3003417849541 MULTI CID FTMS 0 0 0 14203 1323093.125 0.8718117566050495 -1 0.1135940551757812 5 Unmodified _RVPSALVTL_ ENSG00000164944|ENST00000297591|VIRMA;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA 32.78568957990786 0.1150597335874693 4 {I|L}VT{I|L} 4 5 45.433 0.0 0.0 4.7594 0.0 0.0 510.2921467205885 0.0 510.2921467205885 0.0 24.006375246153908 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + {I|L}VT{I|L} 4.7594 + + 51 1 1.127 56731.7 1.0 9350 4856 14203 HBL1_DMSO_200M_050219_2,14208 HBL1_DMSO_200M_050219_2,14208,RVPSALVTL True True RVPSALVTL 75.017474 478.300341784954 12614682.0 14203.0 nc|ENSG00000164944|Q69YN4-2|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA;;ENST00000521080.5_1_8:95511544-95524374:-|nuORF;;nc|ENSG00000164944|Q69YN4-4|VIRMA;;ENSG00000164944|ENST00000297591|VIRMA 4.516723553339641 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14209 75.019 38.0 2651000.0 25 0 145780.0 + 939 AFIITGQTY 9 112 507.2687822389084 1012.5230115446168 2 507.2689086794853 MULTI CID FTMS 0 0 0 14203 1048565.4375 1.0 0 0.0 6 Unmodified _AFIITGQTY_ ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL 32.116972079565 0.1225432171549407 4 [QT]GYT{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]} 9 8 + 22.038 0.0 0.0 2.1765 2.1765 60.869 0.0 0.0 0.0 0.5411342943241237 2.286777669472474 0.5411342943241237 0.5102999566398125 0 0.0 0.0 0.2302046884880938 1.316901560044258 [QT]GYT{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[QT]GTY{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};{[SA]|[TG]}QYT{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};{[QG]|[NA]}TYT{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};{[SA]|[TG]}QTY{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};{[QG]|[NA]}TTY{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[QT]GT{I|L}Y{I|L}{[MS]|[{M(Oxidation (M))|F}A]};{[SA]|[TG]}QT{I|L}Y{I|L}{[MS]|[{M(Oxidation (M))|F}A]};[YT]{[QG]|[NA]}T{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]};{[QG]|[NA]}TT{I|L}Y{I|L}{[MS]|[{M(Oxidation (M))|F}A]} 2.1765;2.1261;2.1231;2.0935;2.0727;2.0431;1.1358;1.0824;1.0789;1.0528 -;-;-;-;-;-;-;-;-;- 744 1 1.127 81465.4 1.0 9351 4856 14203 HBL1_DMSO_200M_050219_2,14209 HBL1_DMSO_200M_050219_2,14209,AFIITGQTY True True AFIITGQTY 75.018653 507.268908679485 8268847.5 14203.0 nc|ENSG00000239900|P30566-2|ADSL;;ENSG00000239900|ENST00000623063|ADSL 4.666557391484578 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14210 75.02 77.0 1355100.0 25 0 256680.0 + 10009 FPLKLIMV 8 106 480.8014878622088 959.5884227912176 2 480.8011352419853 MULTI CID FTMS 0 0 0 14203 966693.25 0.3926323150592725 -2 0.2208938598632812 7 Unmodified _FPLKLIMV_ REV__ENSG00000082516|ENST00000285873|GEMIN5 6.354104778181461 0.7857632046190106 4 [HA]{M(Oxidation (M))|F}WD 5 -1 15.229 0.0 0.0 1.587 0.0 0.0 0.0 300.27803395748634 300.27803395748634 2.464577609514471 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [HA]{M(Oxidation (M))|F}WD 1.587 - 52 1 1.127 83030.2 1.0 9352 4856 14203 HBL1_DMSO_200M_050219_2,14210 HBL1_DMSO_200M_050219_2,14210,FPLKLIMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14211 75.022 83.0 1140100.0 25 0 97356.0 738 AEQDPNVQV 9 125 500.2400111699473 998.4654694066946 2 500.2399474978447 MULTI CID FTMS 0 0 0 14203 547982.375 0.8872572284746679 2 -0.1650314331054687 8 Unmodified _AEQDPNVQV_ ENSG00000104805|ENST00000405315|NUCB1 15.847184025352805 0.4077185912009129 4 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}DVYEV 8 6 + 49.872 0.0 0.0 4.9949 4.9949 84.902 0.0 0.0 0.0 17.712085257533552 27.503095098365726 17.712085257533552 18.905469099468984 0 0.3054621874040891 0.8860566476931632 0.0 0.1861818737241735 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}DVYEV;AAG[YQ]VYEV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[ET]|[MV]}EV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[VS]YQQ;[YE][TP]VYEV;[EP][YT]VYEV;[QA][YQ]VYEV;{[QV]|[N{I|L}]|[RA]|[KV]}Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YEV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QG]|[NA]}{[CA]|SS}V;[{I|L}A][NG]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YEV 4.9949;3.1014;3.0199;2.5203;2.4696;2.3445;2.3066;2.2518;1.9159;1.8735 -;-;-;-;-;-;-;-;-;- 598 1 1.127 77783.9 1.0 9353 4856 14203 HBL1_DMSO_200M_050219_2,14211 HBL1_DMSO_200M_050219_2,14211,AEQDPNVQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14212 75.03 432.0 672740.0 25 0 111190.0 + 26210 NQIEDNDDFQL 11 162 675.7937284084774 1349.5729038837546 2 675.7942993044853 MULTI CID FTMS 0 0 0 14203 482479.71875 0.0275139117183168 -4 0.4058456420898437 9 Unmodified _NQIEDNDDFQL_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 107.09958533191995 0.0092526378468096 4 [AG]N{I|L}EDNDD{M(Oxidation (M))|F}[Q{I|L}] 12 3 + 91.154 0.0 0.0 6.7543 6.7543 78.497 0.0 0.0 0.0 1.904055329204993 4.436974992327123 1.904055329204993 1.904055329204993 0 0.0 1.6989700043360187 0.5649093276264391 3.071333751784365 [AG]N{I|L}EDNDD{M(Oxidation (M))|F}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}{I|L}EDNDD{M(Oxidation (M))|F}[Q{I|L}];[AG]{I|L}NEDNDD{M(Oxidation (M))|F}[Q{I|L}];[AG]N{I|L}EDGGDD{M(Oxidation (M))|F}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}{I|L}EDGGDD{M(Oxidation (M))|F}[Q{I|L}];[Q{I|L}]NEDNDD{M(Oxidation (M))|F}[Q{I|L}];[AG]NE{I|L}DNDD{M(Oxidation (M))|F}[Q{I|L}];GGQ{I|L}EDNDD{M(Oxidation (M))|F}[Q{I|L}];[AG]{I|L}NEDGGDD{M(Oxidation (M))|F}[Q{I|L}];[AG]VQEDNDD{M(Oxidation (M))|F}[Q{I|L}] 6.7543;6.6132;6.2723;6.0801;5.9368;5.9002;5.7651;5.6598;5.5981;5.4726 -;+;-;-;-;-;-;-;-;- + 7204 1 1.127 212118.5 1.0 9354 4856 14203 HBL1_DMSO_200M_050219_2,14212 HBL1_DMSO_200M_050219_2,14212,NQIEDNDDFQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14213 75.031 51.0 874610.0 25 0 87863.0 -1 PCPRPEPI 8 93 483.24794208350033 964.4813312338008 2 483.2485839724541 MULTI CID FTMS 0 0 0 14203 490116.21875 0.6164913122852521 2 -0.1650314331054687 10 Carbamidomethyl (C) _PC(Carbamidomethyl (C))PRPEPI_ ENSG00000203786|ENST00000606109|KPRP 12.531546534597751 0.7257836412119636 4 S{I|L} 2 -1 22.633 0.0 0.0 2.3466 0.0 0.0 746.3542388039164 0.0 746.3542388039164 0.0 5.469323916169387 0.0 0.0 0 0.5 0.0 0.2059771852360797 0.0 S{I|L} 2.3466 - 152 + 1 1.127 40346.9 1.0 9355 4856 14203 HBL1_DMSO_200M_050219_2,14213 HBL1_DMSO_200M_050219_2,14213,PCPRPEPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14214 75.035 212.0 782630.0 25 0 82903.0 + 18251 KVIDYVPGI 9 155 502.2955738745257 1002.5765948158514 2 502.2971679568291 MULTI CID FTMS 0 0 0 14203 366883.6875 0.8015021733916727 -1 0.1135940551757812 11 Unmodified _KVIDYVPGI_ ENSG00000163659|ENST00000295924|TIPARP 52.268347100219714 0.0353964759249114 4 {NN|[MP]|[D{I|L}]|[EV]}YVKVAVP 9 7 + 71.87 0.0 0.0 7.1685 7.1685 84.141 0.0 0.0 0.0 4.337589766985332 4.874340107730006 4.337589766985332 4.337589766985332 0 0.7887254899964358 0.8860566476931632 0.9802046884880936 0.0 {NN|[MP]|[D{I|L}]|[EV]}YVKVAVP;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}VKVAVP;[VS]VVAYVAVP;[VS]VVAYG{I|L}VP;{NN|[MP]|[D{I|L}]|[EV]}YVKG{I|L}VP;{[YD]|[{M(Oxidation (M))|F}M]}V{I|L}KVAVP;[TA]{I|L}VAYVAVP;{[TV]|[{I|L}S]}RVYVAVP;[TA]{I|L}VAYG{I|L}VP;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}VKG{I|L}VP 7.1685;6.7359;6.3719;6.3196;6.1188;6.0387;6.0291;5.9918;5.9769;5.6862 -;-;-;-;-;-;-;-;-;- 1873 1 1.127 127188.8 1.0 9356 4856 14203 HBL1_DMSO_200M_050219_2,14214 HBL1_DMSO_200M_050219_2,14214,KVIDYVPGI True True KVIDYVPGI 75.035318 502.2952 4550566.0 14203.0 ENSG00000163659|ENST00000295924|TIPARP 3.527686913808187 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14215 75.046 606.0 374880.0 25 0 66321.0 + 32259 RWPDYVREL 9 173 617.3224849501827 1232.6304169671653 2 617.3220092654228 MULTI CID FTMS 0 0 0 14203 229266.46875 0.0895917649296589 -21 2.08636474609375 12 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 69.33821966488729 0.021354776001734 4 [WR][DP]YVRE{I|L} 9 0 + 67.801 0.0 0.0 5.5005 5.5005 87.355 0.0 0.0 0.0 10.386277828772135 50.35335007137462 10.386277828772135 20.904500422314385 0 1.325257498915995 1.0969100130080565 0.0 1.424742501084005 + + [WR][DP]YVRE{I|L};{NN|[MP]|[D{I|L}]|[EV]}P[QT]YV[VG]E{I|L};{[TV]|[{I|L}S]}{I|L}[HD][HN]RE{I|L};{I|L}{M(Oxidation (M))|F}R[HN]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L};{I|L}{M(Oxidation (M))|F}RVY[DV]Q{[HG]|PP};{I|L}{M(Oxidation (M))|F}[VG]VY{[WN]|[YH]}HV;{NN|[MP]|[D{I|L}]|[EV]}EM[KT]VRE{I|L};{I|L}{M(Oxidation (M))|F}R[PG]PS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L};[DP][WR]YVRE{I|L};{I|L}{M(Oxidation (M))|F}R[HN]S[VP]TY 5.5005;3.8046;3.3739;3.3455;3.3223;3.2413;3.2079;3.1934;3.1744;3.0299 +;-;-;-;-;-;-;-;-;- + 1863 1 1.127 165205.1 1.0 9357 4856 14203 HBL1_DMSO_200M_050219_2,14215 HBL1_DMSO_200M_050219_2,14215,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14216 75.058 684.0 243860.0 25 0 25072.0 + 44798 YPMYSRDYVYV 11 162 728.3339562323765 1454.653359531553 2 728.3338500857353 MULTI CID FTMS 0 0 0 14203 185692.03125 0.9622139448797 -3 0.2563095092773437 13 Unmodified _YPMYSRDYVYV_ ENSG00000084090|ENST00000337288|STARD7 44.391923383255 0.1486875248750151 4 YPMY[DG]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}GPTV 13 7 + 71.423 0.0 0.0 4.9099 4.9099 67.502 0.0 0.0 0.0 0.7389623789005384 0.7389623789005384 0.7389623789005384 0.1478410159542846 0 1.1861818737241734 1.6989700043360187 0.4698565171985375 0.7742275032520141 YPMY[DG]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}GPTV;YPMY[DG]{I|L}ATYYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[NV]|[RG]}AA{I|L}[DC]EVYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[NV]|[RG]}AA[C(Carbamidomethyl (C))H]VYYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[NV]|[RG]}AA[C(Carbamidomethyl (C))H]YVYV;YPMY{[RE]|[WV]}ATYYV;YPMY[DG]{I|L}AA[NP]M{I|L};YPMY[DG]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}GPS{I|L};YPMY{[RE]|[WV]}{[QD]|[EN]|[WG]|[KD]|[RS]}GPTV;YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}[DG]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}GPTV 4.9099;4.8998;4.8591;4.8183;4.8183;4.7732;4.6544;4.6022;4.5411;4.411 -;-;-;-;-;-;-;-;-;- 13621 + 1 1.127 120292.9 1.0 9358 4856 14203 HBL1_DMSO_200M_050219_2,14216 HBL1_DMSO_200M_050219_2,14216,YPMYSRDYVYV False True YPMYSRDYVYV 75.057826 728.333850085735 3072259.5 14203.0 ENSG00000084090|ENST00000337288|STARD7 7.689374764760335 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14217 75.072 800.0 227320.0 25 0 12788.0 + 31503 RQFEVKFEV 9 213 394.5489245694963 1180.624944308689 3 394.5488769412041 MULTI CID FTMS 0 0 0 14203 156090.34375 1.0 0 0.0 14 Unmodified _RQFEVKFEV_ ENSG00000111331|ENST00000228928|OAS3 42.83518252547288 0.0598927335801051 4 {[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}EVKE{M(Oxidation (M))|F}V 9 2 + 72.079 0.0 0.0 6.1051 6.1051 89.77 0.0 0.0 0.0 10.400217704352457 46.49527338021214 10.400217704352457 20.66946789630613 0 1.3684151806525389 0.0 0.3807196863200844 0.6505149978319906 {[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}EVKE{M(Oxidation (M))|F}V;{[QV]|[N{I|L}]|[RA]|[KV]}{[CT]|[{M(Oxidation (M))|F}G]}EVKE{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}[KC]EVKE{M(Oxidation (M))|F}V;[YT]EKV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WV;[{M(Oxidation (M))|F}E]VKQRE{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KQRE{M(Oxidation (M))|F}V;{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}EVAA[YV]V;{[HG]|PP}[KQ]VHTE{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}E]VK[AG]RE{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K[AG]RE{M(Oxidation (M))|F}V 6.1051;4.3544;4.1878;3.8865;3.7051;3.6201;3.5536;3.4534;2.9252;2.8402 -;-;-;-;-;-;-;-;-;- 1301 1 1.127 144618.2 0.800000011920929 9359 4856 14203 HBL1_DMSO_200M_050219_2,14217 HBL1_DMSO_200M_050219_2,14217,RQFEVKFEV True True RQFEVKFEV 75.071647 394.548876941204 629239.0 14203.0 ENSG00000111331|ENST00000228928|OAS3 5.737608591715495 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14219 75.076 5.3 10493000.0 25 0 1280500.0 29930 QSLEKPEL 8 81 472.2586606002652 942.5027682673305 2 472.2588683962822 MULTI CID FTMS 0 0 0 14218 7788908.5 0.427841175624027 3 -0.2870712280273437 1 Unmodified _QSLEKPEL_ ENSG00000130270|ENST00000310127|ATP8B3;nc|ENSG00000130270|O60423-1|ATP8B3;nc|ENSG00000130270|O60423-3|ATP8B3 36.04419817259434 0.3004715606373109 4 [EP]{I|L}D{I|L} 5 6 42.307 0.0 0.0 4.4888 0.0 0.0 0.0 372.1759609765679 372.1759609765679 19.815534464597704 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.7614393726401688 0.0 [EP]{I|L}D{I|L} 4.4888 - 92 1 1.127 46888.3 1.0 9360 4857 14218 HBL1_DMSO_200M_050219_2,14219 HBL1_DMSO_200M_050219_2,14219,QSLEKPEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14220 75.077 16.0 2531400.0 25 0 302450.0 + 3735 DAFRVNVI 8 65 467.2616036647327 932.5086543962652 2 467.2617065310478 MULTI CID FTMS 0 0 0 14218 2990035.75 0.1619668186500341 3 -0.2870712280273437 2 Unmodified _DAFRVNVI_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 29.081581746732265 0.4323690340403521 4 WV{I|L} 3 6 31.682 0.0 0.0 3.3975 0.0 0.0 516.2819081037125 0.0 516.2819081037125 0.0 27.078343878162343 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 WV{I|L} 3.3975 - 26 1 1.127 38493.4 1.0 9361 4857 14218 HBL1_DMSO_200M_050219_2,14220 HBL1_DMSO_200M_050219_2,14220,DAFRVNVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14221 75.078 11.0 3887800.0 25 0 500480.0 + 15671 IQPDNIVYV 9 75 530.788231548545 1059.56191016389 2 530.7882568240166 MULTI CID FTMS 0 0 0 14218 3260274.5 0.95803358124528 -1 0.0743331909179687 3 Unmodified _IQPDNIVYV_ ENSG00000100883|ENST00000216774|SRP54;nc|ENSG00000100883|P61011-2|SRP54 26.88365393820708 0.1891292719743517 4 {NN|[MP]|[D{I|L}]|[EV]}CTQ{I|L}{I|L}RV 9 6 + 29.051 0.0 0.0 2.7418 2.7418 75.018 0.0 0.0 0.0 4.137342758552695 4.798728197333734 4.137342758552695 9.208187539523752 0 0.0 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}CTQ{I|L}{I|L}RV;{NN|[MP]|[D{I|L}]|[EV]}CT[AG]{I|L}{I|L}RV;{NN|[MP]|[D{I|L}]|[EV]}C[WR]{I|L}RV 2.7418;1.8728;1.2131 -;-;- 125 + 1 1.127 41480.9 1.0 9362 4857 14218 HBL1_DMSO_200M_050219_2,14221 HBL1_DMSO_200M_050219_2,14221,IQPDNIVYV False True IQPDNIVYV 75.078407 530.788256824017 30791984.0 14218.0 nc|ENSG00000100883|P61011-2|SRP54;;ENSG00000100883|ENST00000216774|SRP54 2.134598890940348 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14222 75.08 29.0 1786400.0 25 0 336420.0 + 30804 RIGVSAALMFI 11 79 589.3431502497217 1176.6717475662433 2 589.3434326052666 MULTI CID FTMS 0 0 0 14218 1709721.75 0.5196007995860752 3 -0.2870712280273437 4 Unmodified _RIGVSAALMFI_ REV__ENSG00000205189|ENST00000455036|ZBTB10;REV__nc|ENSG00000205189|Q96DT7-2|ZBTB10;REV__nc|ENSG00000205189|Q96DT7-3|ZBTB10;REV__nc|ENSG00000205189|Q96DT7-4|ZBTB10 3.5964929083625545 0.858179447565866 4 QA{I|L}Q 4 -1 17.423 0.0 0.0 1.4807 0.0 0.0 455.2945025484683 278.11383997135005 733.4083425198183 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QA{I|L}Q 1.4807 - 24 + 1 1.127 46449.1 1.0 9363 4857 14218 HBL1_DMSO_200M_050219_2,14222 HBL1_DMSO_200M_050219_2,14222,RIGVSAALMFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14223 75.081 47.0 3238300.0 25 0 238600.0 + 153 AALPNVYEV 9 128 488.2611871907103 974.5078214482206 2 488.2614929080009 MULTI CID FTMS 0 0 0 14218 1571095.625 0.1366755555466628 3 -0.2870712280273437 5 Unmodified _AALPNVYEV_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 57.47134341890925 0.0274820932774257 4 [NP]VAAYE{I|L}V 9 6 + 45.835 0.0 0.0 4.7034 4.7034 76.407 0.0 0.0 0.0 13.43337292782644 24.039851701021192 13.43337292782644 6.020599913279618 0 0.242992819099939 0.7695510786217261 0.0 0.5866968715561641 [NP]VAAYE{I|L}V;[NP]{I|L}GAYE{I|L}V;[NP]{I|L}QYE{I|L}V;[NP]VYEAA{I|L}V;AAAPAAYE{I|L}V;[NP]VYAAE{I|L}V;[{I|L}P]NGAYE{I|L}V;{[NV]|[RG]}PAAYE{I|L}V;[{I|L}P]NQYE{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}PGAYE{I|L}V 4.7034;4.0856;3.7298;3.0765;2.8998;2.7545;2.5787;2.557;2.2228;2.0779 -;-;-;-;-;-;-;-;-;- 1037 1 1.127 117783.7 1.0 9364 4857 14218 HBL1_DMSO_200M_050219_2,14223 HBL1_DMSO_200M_050219_2,14223,AALPNVYEV True True AALPNVYEV 75.080855 488.261492908001 106773680.0 14218.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 4.5138498942057295 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14224 75.082 48.0 780830.0 25 0 164310.0 + -1 QVEVTSCTCVV 11 57 612.7832629412708 1223.5519729493417 2 612.7839233279228 MULTI CID FTMS 0 0 0 14218 1095203.875 0.5448481726762618 1 -0.0906982421875 6 Carbamidomethyl (C) _QVEVTSC(Carbamidomethyl (C))TCVV_ REV__ENSG00000175115|ENST00000320580|PACS1;REV__nc|ENSG00000175115|Q6VY07-2|PACS1 8.745405648335112 0.8338865417133445 4 {[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}]E[DN]TSV 10 -1 + 44.825 0.0 0.0 3.6635 3.6635 77.827 0.0 0.0 0.0 34.340441325213106 9.146518864155126 9.146518864155126 9.945154339870278 0 0.4247425010840047 2.0 0.2215141619232908 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}]E[DN]TSV;{[QV]|[N{I|L}]|[RA]|[KV]}E[RV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{[WT]|[RM]};{[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}]E[DN]{[WT]|[RM]} 3.6635;2.8507;2.4421 -;-;- 67 + 1 1.127 33159.5 1.0 9365 4857 14218 HBL1_DMSO_200M_050219_2,14224 HBL1_DMSO_200M_050219_2,14224,QVEVTSCTCVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14225 75.085 168.0 505390.0 25 0 85989.0 + 41913 VQFRRKFTL 9 106 597.8564034796636 1193.6982540261272 2 597.8565551638603 MULTI CID FTMS 0 0 0 14218 673079.6875 0.4539931873672971 3 -0.2870712280273437 7 Unmodified _VQFRRKFTL_ REV__ENSG00000109794|ENST00000706927|FAM149A;REV__nc|ENSG00000109794|A5PLN7-2|FAM149A;REV__nc|ENSG00000109794|A5PLN7-4|FAM149A;REV__nc|ENSG00000109794|A5PLN7|FAM149A 1.844237919475145 0.850302753031785 4 V 1 -1 9.7539 0.0 0.0 0.81712 0.0 0.0 1076.6187461299342 0.0 1076.6187461299342 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.81712 + + 32 + 1 1.127 70303.6 1.0 9366 4857 14218 HBL1_DMSO_200M_050219_2,14225 HBL1_DMSO_200M_050219_2,14225,VQFRRKFTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14226 75.088 101.0 771490.0 25 0 110660.0 + 15289 IPIPIRTP 8 61 453.7924634572879 0 453.7923766970634 PEAK CID FTMS 0 0 0 14218 634840.375 0.019573834758749 23 -2.178466796875 8 Unmodified _IPIPIRTP_ REV__ENSG00000187048|ENST00000310638|CYP4A11 25.399314129420983 0.3159236278339657 4 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 6 -1 19.481 0.0 0.0 2.1513 0.0 0.0 113.08381413606068 66.03574548892811 179.11955962498877 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 2.1513 - 43 + 1 1.127 65502.1 1.0 9367 4857 14218 HBL1_DMSO_200M_050219_2,14226 HBL1_DMSO_200M_050219_2,14226,IPIPIRTP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14227 75.089 45.0 1153600.0 25 0 197870.0 + -1 IAMFMYVI 8 86 510.2485462096224 1018.4825394860447 2 510.2492248415947 MULTI CID FTMS 0 0 0 14218 578368.625 0.3513513698222372 2 -0.1970138549804687 9 2 Oxidation (M) _IAM(Oxidation (M))FM(Oxidation (M))YVI_ REV__ENSG00000188467|ENST00000341459|SLC24A5 17.086550045450526 0.6584923310065985 4 [{I|L}A]G 3 -1 20.942 0.0 0.0 2.0562 0.0 0.0 0.0 774.3164987968447 774.3164987968447 0.1849178312658494 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A]G 2.0562 - 176 1 1.127 45613.4 1.0 9368 4857 14218 HBL1_DMSO_200M_050219_2,14227 HBL1_DMSO_200M_050219_2,14227,IAMFMYVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14228 75.09 55.0 1074000.0 25 0 103900.0 + 22178 LPQAKLAYEV 10 93 566.3221500012316 1130.6297470692632 2 566.3226196169853 MULTI CID FTMS 0 0 0 14218 473189.03125 0.5109373027092277 3 -0.2870712280273437 10 Unmodified _LPQAKLAYEV_ REV__ENSG00000102001|ENST00000323022|CACNA1F;REV__nc|ENSG00000102001|O60840-4|CACNA1F;REV__nc|ENSG00000102001|O60840-5|CACNA1F;REV__nc|ENSG00000102001|O60840-6|CACNA1F;REV__nc|ENSG00000102001|O60840-7|CACNA1F;REV__nc|ENSG00000102001|O60840|CACNA1F 6.723162845929126 0.6955379296933136 4 [NP]VAAN 6 -1 15.355 0.0 0.0 1.3581 0.0 0.0 0.0 561.3125222980319 561.3125222980319 4.095515474239628 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 [NP]VAAN 1.3581 - 127 1 1.127 51341.3 1.0 9369 4857 14218 HBL1_DMSO_200M_050219_2,14228 HBL1_DMSO_200M_050219_2,14228,LPQAKLAYEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14229 75.093 116.0 604220.0 25 0 75530.0 38771 TVDFYFEEV 9 90 574.7589706427858 1147.5033883523715 2 574.7602416872978 MULTI CID FTMS 0 0 0 14218 376873.875 0.8096063911566551 3 -0.2870712280273437 11 Unmodified _TVDFYFEEV_ ENSG00000196353|ENST00000429747|CPNE4;nc|ENSG00000196353|Q96A23-2|CPNE4 21.74664581756881 0.2544899275067181 4 {[TV]|[{I|L}S]}[{I|L}T]MW 6 7 34.226 0.0 0.0 2.9826 0.0 0.0 0.0 413.0960482233032 413.0960482233032 19.62144052772942 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 {[TV]|[{I|L}S]}[{I|L}T]MW 2.9826 - 74 + 1 1.127 60521.9 1.0 9370 4857 14218 HBL1_DMSO_200M_050219_2,14229 HBL1_DMSO_200M_050219_2,14229,TVDFYFEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14230 75.096 177.0 932180.0 25 0 84010.0 -1 MTIMNQCV 8 165 498.7187948695256 995.4230368058512 2 498.7209045290947 MULTI CID FTMS 0 0 0 14218 320663.1875 0.9600119379079096 3 -0.2870712280273437 12 Carbamidomethyl (C) _MTIMNQC(Carbamidomethyl (C))V_ ENSG00000185926|ENST00000328188|OR4C46 19.438996006549623 0.6237395211498085 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MQMP{[ET]|[MV]} 8 -1 + 33.761 0.0 0.0 3.3916 3.3916 70.336 0.0 0.0 0.0 6.989700043360188 2.764209843288903 2.764209843288903 4.503187623076954 0 0.25 0.8860566476931632 0.0 0.6237125054200234 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MQMP{[ET]|[MV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MMQP{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}YQMP{[ET]|[MV]};[{M(Oxidation (M))|F}T]PMQ[C(Carbamidomethyl (C))N]V;{NN|[MP]|[D{I|L}]|[EV]}YMQP{[ET]|[MV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MMGAP{[ET]|[MV]};[{M(Oxidation (M))|F}T]PQM[C(Carbamidomethyl (C))N]V;{NN|[MP]|[D{I|L}]|[EV]}YMGAP{[ET]|[MV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[AG]MP{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}Y[AG]MP{[ET]|[MV]} 3.3916;2.9392;2.6894;2.5015;2.237;2.2343;2.0491;1.8832;1.8346;1.759 -;-;-;-;-;-;-;-;-;- 1481 1 1.127 122958.1 1.0 9371 4857 14218 HBL1_DMSO_200M_050219_2,14230 HBL1_DMSO_200M_050219_2,14230,MTIMNQCV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14231 75.099 163.0 405140.0 25 0 45019.0 + 18789 LAPLAKVI 8 88 412.7839663047197 823.5533796762394 2 412.7837097048759 MULTI CID FTMS 0 0 0 14218 275954.25 0.0525167746119228 4 -0.3308181762695312 13 Unmodified _LAPLAKVI_ ENSG00000105679|ENST00000222286|GAPDHS;ENSG00000111640|ENST00000229239|GAPDH;ENST00000423411.2_1_6:135940529-135940997:-|nuORF;ENST00000455134.1_1_10:93426952-93427153:-|nuORF;ENST00000515281.1_1_11:88141588-88141981:-|nuORF;nc|ENSG00000111640|P04406-2|GAPDH 40.44857923139169 0.2267865117615937 4 [{I|L}A]P{I|L}AKV{I|L} 8 0 + 64.563 0.0 0.0 7.8395 7.8395 89.005 0.0 0.0 0.0 18.315468932362577 7.269987279362624 7.269987279362624 7.269987279362624 0 0.8494850021680094 2.0 0.0 0.3494850021680094 + + [{I|L}A]P{I|L}AKV{I|L};[{I|L}A]P{I|L}AK{I|L}V;[{I|L}A]{I|L}PAKV{I|L};[{I|L}A]{I|L}PAK{I|L}V 7.8395;6.9568;6.7492;5.8665 +;-;-;- + 278 + 1 1.127 57420.6 1.0 9372 4857 14218 HBL1_DMSO_200M_050219_2,14231 HBL1_DMSO_200M_050219_2,14231,LAPLAKVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14232 75.11 621.0 223680.0 25 0 55877.0 + -1 CDEWWRQCDEK 11 123 777.8069012103231 1553.599249487446 2 778.3096801638603 MULTI CID FTMS 0 0 0 14218 263634.40625 0.0260157890345523 8 -0.7479629516601562 14 Carbamidomethyl (C) _C(Carbamidomethyl (C))DEWWRQCDEK_ REV__ENSG00000165457|ENST00000298223|FOLR2 2.735195868890462 0.8622431031272658 4 YY{[QC]|[C(Carbamidomethyl (C))A]}YYY 7 -1 36.087 0.0 0.0 2.3228 0.0 0.0 0.0 504.1755326672496 504.1755326672496 14.53566308461091 0.0 0.0 0.0 0 0.0 2.0 0.0 1.1861818737241734 YY{[QC]|[C(Carbamidomethyl (C))A]}YYY 2.3228 - 3701 1 1.127 97469.2 1.0 9373 4857 14218 HBL1_DMSO_200M_050219_2,14232 HBL1_DMSO_200M_050219_2,14232,CDEWWRQCDEK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14233 75.121 624.0 276210.0 25 0 35877.0 + 4684 DAYVLPKLYVK 11 153 654.8819054471516 1307.749257961103 2 654.8824340701103 MULTI CID FTMS 0 0 0 14218 241531.265625 0.062435665983733 5 -0.4706039428710937 15 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 73.1962812333195 0.0231417158388345 4 {[DA]|[EG]}YV{I|L}PK{I|L}YVK 11 0 + 81.993 0.0 0.0 6.2698 6.2698 87.764 0.0 0.0 0.0 19.55909798898421 9.604093769761874 9.604093769761874 9.604093769761874 0 2.4489700043360187 1.3010299956639813 0.0 0.2614393726401688 + + {[DA]|[EG]}YV{I|L}PK{I|L}YVK;{[DA]|[EG]}YV{I|L}PK{I|L}YKV 6.2698;5.5354 +;- + 952 + 1 1.127 130206.5 1.0 9374 4857 14218 HBL1_DMSO_200M_050219_2,14233 HBL1_DMSO_200M_050219_2,14233,DAYVLPKLYVK True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14234 75.135 800.0 356420.0 25 0 33442.0 + 41336 VPILAPRI 8 167 439.7947231816443 877.5748934300887 2 439.7947265505791 MULTI CID FTMS 0 0 0 14218 210142.21875 0.0260685533129098 6 -0.521331787109375 16 Unmodified _VPILAPRI_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 56.541270873467816 0.1144128637334507 4 VP{I|L}{I|L}A[RP]{I|L} 8 0 + 69.268 0.0 0.0 7.8931 7.8931 78.274 0.0 0.0 0.0 28.62826806974688 8.45098040014257 8.45098040014257 0.2545373444029053 0 0.7742275032520141 1.2218487496163564 0.0 0.5941876774005248 + + VP{I|L}{I|L}A[RP]{I|L};V{I|L}P{I|L}A[RP]{I|L};VP{I|L}{I|L}A[R{I|L}]P;V{I|L}P{I|L}A[R{I|L}]P;VP{I|L}{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}P;V{I|L}P{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}P 7.8931;7.8641;6.9301;6.9011;5.7274;5.6984 +;-;-;-;-;- + 620 + 1 1.127 218669.4 0.9100000262260436 9375 4857 14218 HBL1_DMSO_200M_050219_2,14234 HBL1_DMSO_200M_050219_2,14234,VPILAPRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14235 75.147 692.0 230570.0 25 0 44315.0 + 45702 YYDGDIGNYYY 11 163 703.2825654179 1404.5505779025998 2 703.2834960818291 MULTI CID FTMS 0 0 0 14218 188647.9375 0.0247961133228285 6 -0.521331787109375 17 Unmodified _YYDGDIGNYYY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 63.960520009940105 0.0530716371881472 4 YYDGDY{[VA]|[{I|L}G]}NYY 11 2 + 78.849 0.0 0.0 5.6138 5.6138 83.035 0.0 0.0 0.0 15.69678965379532 16.575773191777927 15.69678965379532 9.128498242810991 0 0.8494850021680094 2.0 1.916386562212268 0.0 YYDGDY{[VA]|[{I|L}G]}NYY;YYDGDY{[VA]|[{I|L}G]}GGYY;YYDGD{I|L}[NG]YYY;YYDGD{I|L}[YG]NYY;{NN|[MP]|[D{I|L}]|[EV]}DGYGNYYYY;{[YD]|[{M(Oxidation (M))|F}M]}GD{I|L}GNYYYY;YYDG{I|L}D[NG]YYY;{[YD]|[{M(Oxidation (M))|F}M]}GDYY{[VA]|[{I|L}G]}NYY;[MT]GHHGNYYYY;YYDG{I|L}D[YG]NYY 5.6138;4.9639;4.9381;4.7411;4.4962;4.4677;4.3274;4.2751;4.1708;4.1303 -;-;+;-;-;-;-;-;-;- + 5615 1 1.127 114770.5 1.0 9376 4857 14218 HBL1_DMSO_200M_050219_2,14235 HBL1_DMSO_200M_050219_2,14235,YYDGDIGNYYY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14236 75.162 800.0 360630.0 25 0 30896.0 + 226 AAVCTYIGTD 10 240 338.49230303879983 1012.4550797165996 3 338.4919311404228 MULTI CID FTMS 0 0 0 14218 154464.34375 0.3061269941169049 3 -0.2870712280273437 18 Unmodified _AAVCTYIGTD_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 20.453626601364224 0.5043500229302764 4 AAVE 4 -1 50.054 0.0 0.0 4.9439 0.0 0.0 0.0 639.2471292834729 639.2471292834729 21.776372751690403 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 0.7302046884880937 0.0 AAVE 4.9439 - 431 + 1 1.127 230554.0 0.6800000071525574 9377 4857 14218 HBL1_DMSO_200M_050219_2,14236 HBL1_DMSO_200M_050219_2,14236,AAVCTYIGTD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14238 75.167 35.0 1531500.0 25 0 181860.0 -1 VQNMPFTVS 9 82 519.7508655202303 1037.4871781072604 2 519.7518798708916 MULTI CID FTMS 0 0 0 14237 1007414.0 0.4620397367455798 2 -0.1963729858398437 1 Oxidation (M) _VQNM(Oxidation (M))PFTVS_ ENSG00000244462|ENST00000374114|RBM12 15.847184025352805 0.4077185912009129 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[RE]|[WV]}{I|L}{I|L} 7 -1 34.225 0.0 0.0 3.2988 0.0 0.0 0.0 182.9394845860292 182.9394845860292 3.290587192642249 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[RE]|[WV]}{I|L}{I|L} 3.2988 - 179 1 1.127 46926.9 1.0 9378 4858 14237 HBL1_DMSO_200M_050219_2,14238 HBL1_DMSO_200M_050219_2,14238,VQNMPFTVS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14239 75.168 54.0 782080.0 25 0 95656.0 + 6125 DSYINVQEI 9 83 540.7641212799386 1079.5136896266772 2 540.7645141482353 MULTI CID FTMS 0 0 0 14237 471883.40625 0.3075143394844066 2 -0.1963729858398437 2 Unmodified _DSYINVQEI_ ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-3|SETX;nc|ENSG00000107290|Q7Z333-4|SETX 15.847184025352805 0.4077185912009129 4 {I|L} 1 8 14.604 0.0 0.0 1.3528 0.0 0.0 948.418839018082 0.0 948.418839018082 0.0 4.6040937697618745 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3528 + + 77 + 1 1.127 42617.2 1.0 9379 4858 14237 HBL1_DMSO_200M_050219_2,14239 HBL1_DMSO_200M_050219_2,14239,DSYINVQEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14240 75.169 7.8 8014300.0 25 0 1173700.0 8143 EPLKKCIL 8 72 472.28775725673984 942.5609615802796 2 472.2879821658134 MULTI CID FTMS 0 0 0 14237 4492107.5 1.0 0 0.0 3 Unmodified _EPLKKCIL_ ENSG00000163319|ENST00000295491|MRPS18C;ENST00000512375.1_1_4:84379507-84379660:+|nuORF 9.347437153973935 0.7675937258251505 4 [EP]{I|L} 3 5 22.932 0.0 0.0 2.4329 0.0 0.0 0.0 600.3582387621734 600.3582387621734 9.436974992327125 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + [EP]{I|L} 2.4329 + + 30 1 1.127 53765.5 1.0 9380 4858 14237 HBL1_DMSO_200M_050219_2,14240 HBL1_DMSO_200M_050219_2,14240,EPLKKCIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14241 75.171 27.0 1570700.0 25 0 99921.0 + 45837 YYPPSQIAQL 10 65 590.306293368628 1178.5980338040558 2 590.3064453005791 MULTI CID FTMS 0 0 0 14237 1475845.25 0.4825927923618086 -2 0.1650314331054687 4 Unmodified _YYPPSQIAQL_ ENSG00000070756|ENST00000318607|PABPC1;nc|ENSG00000070756|P11940-2|PABPC1 31.26834338654808 0.266153677697784 4 YYP 3 7 32.319 0.0 0.0 2.7422 0.0 0.0 0.0 752.3859957330686 752.3859957330686 12.35399896394355 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YYP 2.7422 + + 72 + 1 1.127 39597.6 1.0 9381 4858 14237 HBL1_DMSO_200M_050219_2,14241 HBL1_DMSO_200M_050219_2,14241,YYPPSQIAQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14242 75.172 29.0 1645600.0 25 0 85134.0 + 15580 IPYPLPPNY 9 98 537.2892171800312 1072.5638814268625 2 537.2874023318291 MULTI CID FTMS 0 0 0 14237 771147.375 0.9127869169722396 -4 0.38592529296875 5 Unmodified _IPYPLPPNY_ ENSG00000134802|ENST00000395124|SLC43A3;ENST00000528098.5_1_11:57182763-57193651:-|nuORF;nc|ENSG00000134802|Q8NBI5-2|SLC43A3 43.85829265575387 0.0542763391141878 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}P 6 5 30.067 0.0 0.0 2.8033 0.0 0.0 0.0 389.1491224759436 389.1491224759436 6.043582521789375 0.0 0.0 0.0 0 0.8252574989159953 0.958607314841775 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}P 2.8033 - 403 1 1.127 44298.6 1.0 9382 4858 14237 HBL1_DMSO_200M_050219_2,14242 HBL1_DMSO_200M_050219_2,14242,IPYPLPPNY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14243 75.173 46.0 1127100.0 25 0 51687.0 + 21969 LPPNLYPTV 9 80 507.2872214241527 1012.5598899151054 2 507.2876159548759 MULTI CID FTMS 0 0 0 14237 645060.75 0.846732682624762 -3 0.27862548828125 6 Unmodified _LPPNLYPTV_ ENSG00000010017|ENST00000011619|RANBP9;nc|ENSG00000010017|Q96S59-3|RANBP9 50.855029805455786 0.0384952370514206 4 [{I|L}P]NPY{I|L}PS{I|L} 9 5 + 47.408 0.0 0.0 4.682 4.682 71.815 0.0 0.0 0.0 6.636890462689138 12.2799079748904 6.636890462689138 3.010299956639805 0 0.6822333069283655 1.2218487496163564 0.0 0.3807196863200844 [{I|L}P]NPY{I|L}PS{I|L};[{I|L}P]NP{I|L}YPS{I|L};[{I|L}P]NYP{I|L}PS{I|L};[TP]V{[WT]|[RM]}{I|L}PS{I|L};[{I|L}P]GGPY{I|L}PS{I|L};[NP]{I|L}PY{I|L}PS{I|L};[{I|L}P]S{[WT]|[RM]}{I|L}PS{I|L};[{I|L}P]GGP{I|L}YPS{I|L};[NP]{I|L}P{I|L}YPS{I|L};[{I|L}P]GGYP{I|L}PS{I|L} 4.682;4.3847;4.2108;4.0266;3.3966;3.3519;3.3014;3.0993;3.0546;2.9254 -;-;-;-;-;-;-;-;-;- 284 1 1.127 47149.4 1.0 9383 4858 14237 HBL1_DMSO_200M_050219_2,14243 HBL1_DMSO_200M_050219_2,14243,LPPNLYPTV True True LPPNLYPTV 75.172923 507.287615954876 33836728.0 14237.0 ENSG00000010017|ENST00000011619|RANBP9;;nc|ENSG00000010017|Q96S59-3|RANBP9 4.958107630411784 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14244 75.174 47.0 1149000.0 25 0 97840.0 + 13867 RIYNEIPDI 9 73 566.8026493721685 1131.590745811137 2 566.8032714724541 MULTI CID FTMS 0 0 0 14237 566347.3125 0.5384829725998482 -2 0.1650314331054687 7 Unmodified _HVITPGSPEPV_ nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4 12.240655878213236 0.7805268987462184 4 HV 2 9 34.949 0.0 0.0 3.0884 0.0 0.0 0.0 892.4318331354124 892.4318331354124 4.79843590327194 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + HV 3.0884 + + 66 + 1 1.127 50049.1 1.0 9384 4858 14237 HBL1_DMSO_200M_050219_2,14244 HBL1_DMSO_200M_050219_2,14244,HVITPGSPEPV False False RIYNEIPDI 75.174202 566.803271472454 18626816.0 14237.0 nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 4.584194501241048 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14245 75.177 116.0 1008100.0 25 0 134900.0 + 18259 KVIEAIRVEL 10 98 585.3665312663941 1168.718509599588 2 585.3667480349541 MULTI CID FTMS 0 0 0 14237 545036.25 0.2911175915333679 -2 0.1650314331054687 8 Unmodified _KVIEAIRVEL_ ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1 22.10888232116614 0.4719523613745568 4 KV{I|L}EA{I|L} 6 4 71.19 0.0 0.0 6.0913 0.0 0.0 0.0 512.2856539361936 512.2856539361936 49.00637524615391 0.0 0.0 0.0 0 1.424742501084005 0.8538719643217619 0.4247425010840047 0.0 + KV{I|L}EA{I|L} 6.0913 + + 300 + 1 1.127 92740.8 1.0 9385 4858 14237 HBL1_DMSO_200M_050219_2,14245 HBL1_DMSO_200M_050219_2,14245,KVIEAIRVEL False True KVIEAIRVEL 75.176635 585.366748034954 38973933.0 14237.0 ENSG00000198901|ENST00000394249|PRC1;;nc|ENSG00000198901|O43663-2|PRC1;;nc|ENSG00000198901|O43663-3|PRC1;;nc|ENSG00000198901|O43663-4|PRC1 5.029754002888997 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14246 75.179 94.0 867770.0 25 0 214440.0 + 23040 LSKRAGLKGI 10 99 521.8389525924099 1041.6633522516197 2 521.8414184451103 MULTI CID FTMS 0 0 0 14237 467997.5 1.0 0 0.0 9 Unmodified _LSKRAGLKGI_ REV__ENST00000416172.1_1_15:64791547-64791595:+|nuORF 10.073929032068715 0.6785112666868882 4 {[TV]|[{I|L}S]}[KQ]{[VA]|[{I|L}G]}VK{[VA]|[{I|L}G]} 10 -1 + 12.922 0.0 0.0 1.2405 1.2405 62.694 0.0 0.0 0.0 0.447494208277206 -13.399480616943508 -13.399480616943508 1.76091259055681 0 0.0 1.154901959985743 0.0 0.0 {[TV]|[{I|L}S]}[KQ]{[VA]|[{I|L}G]}VK{[VA]|[{I|L}G]};{[TV]|[{I|L}S]}[KQ]{[VA]|[{I|L}G]}{I|L}[RK];{[TV]|[{I|L}S]}[KQ]{[VA]|[{I|L}G]}VV[KA];{[TV]|[{I|L}S]}[KQ][R{I|L}]K{[VA]|[{I|L}G]};{[TV]|[{I|L}S]}[KQ][R{I|L}]V[KA];[KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[VA]|[{I|L}G]}VK{[VA]|[{I|L}G]};[KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[VA]|[{I|L}G]}{I|L}[RK] 1.2405;1.0714;0.9515;0.61341;0.32442;0.2078;0.038748 -;-;-;-;-;-;- 117 1 1.127 68371.8 1.0 9386 4858 14237 HBL1_DMSO_200M_050219_2,14246 HBL1_DMSO_200M_050219_2,14246,LSKRAGLKGI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14247 75.183 209.0 290410.0 25 0 18586.0 + + 26321 YVFDGKPPQL 10 90 582.335248833607 1162.655944734014 2 582.3348266482353 MULTI CID FTMS 0 0 0 14237 447880.3125 0.3554872270182168 4 -0.3799057006835937 10 Unmodified _NRRSPVPAPAV_ ENSG00000168496|ENST00000305885|FEN1;nc|ENSG00000168496|P39748-2|FEN1 5.731851221503515 0.8481046878870278 4 [VS]VAPKGD{M(Oxidation (M))|F} 9 -1 21.885 0.0 0.0 1.8823 0.0 0.0 0.0 259.157382952211 259.157382952211 11.288869307155435 0.0 0.0 0.0 0 0.3935078169319297 0.0 0.25 0.0 [VS]VAPKGD{M(Oxidation (M))|F} 1.8823 - 178 1 1.127 51083.9 1.0 9387 4858 14237 HBL1_DMSO_200M_050219_2,14247 HBL1_DMSO_200M_050219_2,14247,NRRSPVPAPAV False False YVFDGKPPQL 75.182679 582.334826648235 1238134.375 14237.0 ENSG00000168496|ENST00000305885|FEN1;;nc|ENSG00000168496|P39748-2|FEN1 5.504875183105469 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14248 75.192 556.0 472000.0 25 0 55022.0 39855 VFHILGILYF 10 189 611.3558527162176 1220.697152499235 2 611.3562499880791 MULTI CID FTMS 0 0 0 14237 391335.0625 0.3740351199982556 12 -1.0874481201171875 11 Unmodified _VFHILGILYF_ ENST00000561012.5_1_15:80390870-80403836:+|nuORF 4.3292370932331545 0.7066112369704343 4 VC{M(Oxidation (M))|F}D 4 9 18.928 0.0 0.0 1.5506 0.0 0.0 145.1984475205225 608.3018282525999 753.5002757731224 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VC{M(Oxidation (M))|F}D 1.5506 - 597 + 1 1.127 192426.6 1.0 9388 4858 14237 HBL1_DMSO_200M_050219_2,14248 HBL1_DMSO_200M_050219_2,14248,VFHILGILYF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14249 75.198 281.0 398610.0 25 0 29742.0 + 32096 RVLPSIVNEV 10 116 563.3350569643509 1124.6555609955017 2 563.3354369997978 MULTI CID FTMS 0 0 0 14237 369836.34375 0.5002192386269804 2 -0.1963729858398437 12 Unmodified _RVLPSIVNEV_ ENSG00000215021|ENST00000535923|PHB2;ENST00000543465.5_1_12:7077022-7079730:-|nuORF;ENST00000544888.5_1_12:7077022-7079603:-|nuORF;nc|ENSG00000215021|Q99623-2|PHB2 43.9818466556824 0.1155196613165264 4 {I|L}VNEV 5 5 47.761 0.0 0.0 4.2467 0.0 0.0 552.3378654486485 0.0 552.3378654486485 0.0 16.24552818783222 0.0 0.0 0 0.9802046884880936 0.0 0.0 0.0 + {I|L}VNEV 4.2467 + + 205 1 1.127 92438.0 1.0 9389 4858 14237 HBL1_DMSO_200M_050219_2,14249 HBL1_DMSO_200M_050219_2,14249,RVLPSIVNEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14250 75.203 278.0 389070.0 25 0 58028.0 40074 VGHERKVQLVT 11 117 633.3688785604222 1264.7232041876443 2 633.3694335818291 MULTI CID FTMS 0 0 0 14237 326648.84375 0.3600906913085027 -5 0.4213409423828125 13 Unmodified _VGHERKVQLVT_ ENSG00000178467|ENST00000383729|P4HTM;ENST00000472301.5_1_3:49027419-49042675:+|nuORF;ENST00000484115.5_1_3:49028265-49040202:+|nuORF;ENST00000609406.1_1_3:49028265-49028403:+|nuORF;nc|ENSG00000178467|Q9NXG6-2|P4HTM;nc|ENSG00000178467|Q9NXG6-3|P4HTM 5.296884461304476 0.8501568894076437 4 S 1 11 4.67 0.0 0.0 0.36925 0.0 0.0 891.5573239159631 283.11884485416255 1174.6761687701255 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 S 0.36925 - 54 + 1 1.127 87705.9 1.0 9390 4858 14237 HBL1_DMSO_200M_050219_2,14250 HBL1_DMSO_200M_050219_2,14250,VGHERKVQLVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14251 75.207 212.0 685920.0 25 0 51801.0 + 4871 DGATILKL 8 146 415.7527288341325 829.490904735065 2 415.7527953982353 MULTI CID FTMS 0 0 0 14237 322669.59375 0.338912438363157 -2 0.1650314331054687 14 Unmodified _DGATILKL_ ENSG00000120438|ENST00000321394|TCP1;ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;nc|ENSG00000135624|Q99832-3|CCT7 57.47134341890925 0.1146309765603773 4 [DG]AT{I|L}{I|L}K{I|L} 8 0 [DG]A + + 43.429 21.171 8.7092 5.2357 5.2357 53.52 0.0 0.0 0.0 0.0 18.495622993650542 0.0 0.0 0 0.7614393726401688 0.0 0.3807196863200844 0.25 + + [DG]AT{I|L}{I|L}K{I|L} 5.2357 + + 233 + 1 1.127 115598.4 1.0 9391 4858 14237 HBL1_DMSO_200M_050219_2,14251 HBL1_DMSO_200M_050219_2,14251,DGATILKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14252 75.209 104.0 509880.0 25 0 53849.0 + 19523 LFNDSRVTF 9 87 549.7826326120024 1097.5507122908048 2 549.7827636599541 MULTI CID FTMS 0 0 0 14237 244990.921875 1.0 0 0.0 15 Unmodified _LFNDSRVTF_ ENSG00000170185|ENST00000307017|USP38;nc|ENSG00000170185|Q8NB14-2|USP38 31.26834338654808 0.1333407332142048 4 {I|L}{M(Oxidation (M))|F}N{I|L}M[C(Carbamidomethyl (C))S]{M(Oxidation (M))|F} 8 5 45.17 0.0 0.0 4.1155 0.0 0.0 0.0 82.06691156558827 82.06691156558827 33.38737318623727 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.4247425010840047 {I|L}{M(Oxidation (M))|F}N{I|L}M[C(Carbamidomethyl (C))S]{M(Oxidation (M))|F} 4.1155 - 238 + 1 1.127 46498.5 1.0 9392 4858 14237 HBL1_DMSO_200M_050219_2,14252 HBL1_DMSO_200M_050219_2,14252,LFNDSRVTF False True LFNDSRVTF 75.209016 549.782763659954 2400878.25 14237.0 nc|ENSG00000170185|Q8NB14-2|USP38;;ENSG00000170185|ENST00000307017|USP38 1.7171610593795776 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14253 75.212 171.0 494390.0 25 0 29678.0 + 20987 LNQLIIDYL 9 153 552.8186206638845 1103.622688394569 2 553.3178588747978 MULTI CID FTMS 0 0 0 14237 239532.609375 1.0 0 0.0 16 Unmodified _LNQLIIDYL_ REV__ENSG00000167881|ENST00000307877|SRP68;REV__ENST00000588736.1_1_17:74041371-74044231:-|nuORF;REV__nc|ENSG00000167881|Q9UHB9-2|SRP68;REV__nc|ENSG00000167881|Q9UHB9-3|SRP68;REV__nc|ENSG00000167881|Q9UHB9-4|SRP68 7.910154910731844 0.6385446671287552 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EY{I|L}T 7 -1 19.131 0.0 0.0 1.7334 0.0 0.0 0.0 254.1378610842752 254.1378610842752 1.1353533893810592 0.0 0.0 0.0 0 0.0 0.5086383061657274 0.0 0.2396518287104437 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EY{I|L}T 1.7334 - 686 1 1.127 69862.8 1.0 9393 4858 14237 HBL1_DMSO_200M_050219_2,14253 HBL1_DMSO_200M_050219_2,14253,LNQLIIDYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14254 75.227 758.0 333430.0 25 0 28510.0 + + -1 YPYEYLGGHI 10 238 606.3698872753153 1210.7252216174304 2 606.3696166872978 MULTI CID FTMS 0 0 0 14237 217445.53125 0.1694011765424213 4 -0.3799057006835937 17 Oxidation (M) _M(Oxidation (M))LQKLKKAHV_ nc|ENSG00000158402|P30307-2|CDC25C;nc|ENSG00000158402|P30307-3|CDC25C;ENSG00000158402|ENST00000323760|CDC25C;nc|ENSG00000158402|P30307-4|CDC25C 4.3292370932331545 0.7066112369704343 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ER{I|L}E{M(Oxidation (M))|F}{I|L} 8 -1 53.009 0.0 0.0 4.3783 0.0 0.0 0.0 160.19782693853236 160.19782693853236 40.46575020740909 0.0 0.0 0.0 0 0.0 2.0 1.1307196863200843 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ER{I|L}E{M(Oxidation (M))|F}{I|L} 4.3783 - 2895 1 1.127 178789.6 1.0 9394 4858 14237 HBL1_DMSO_200M_050219_2,14254 HBL1_DMSO_200M_050219_2,14254,MLQKLKKAHV False False YPYEYLGGHI 75.226666 606.369616687298 8914379.0 14237.0 nc|ENSG00000158402|P30307-2|CDC25C;;nc|ENSG00000158402|P30307-3|CDC25C;;ENSG00000158402|ENST00000323760|CDC25C;;nc|ENSG00000158402|P30307-4|CDC25C 6.646590073903401 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14255 75.24 782.0 343820.0 25 0 17485.0 + + 21679 IPYTFEDRI 9 228 577.3487812540651 1152.68300957493 2 577.3489868044853 MULTI CID FTMS 0 0 0 14237 198204.828125 0.5757192525671593 -2 0.1650314331054687 18 Unmodified _LPLNRTVVEL_ ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57626939-57627538:+|nuORF;ENSG00000182199|ENST00000328923|SHMT2;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;nc|ENSG00000182199|P34897-3|SHMT2;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 10.823927491677226 0.6659270209832991 4 PYT 3 -1 23.94 0.0 0.0 2.0769 0.0 0.0 113.18719819027486 675.3128939298109 788.5000921200858 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 PYT 2.0769 - 4764 + 1 1.127 200210.0 1.0 9395 4858 14237 HBL1_DMSO_200M_050219_2,14255 HBL1_DMSO_200M_050219_2,14255,LPLNRTVVEL False False IPYTFEDRI 75.240206 577.348986804485 924881.5 14237.0 ENST00000553837.5_1_12:57625333-57628141:+|nuORF;;ENST00000554467.5_1_12:57626939-57627538:+|nuORF;;ENSG00000182199|ENST00000328923|SHMT2;;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;;nc|ENSG00000182199|P34897-2|SHMT2;;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;;nc|ENSG00000182199|P34897-3|SHMT2;;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 3.3071817557017007 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14256 75.253 766.0 509040.0 25 0 27006.0 + 29643 QNCCRSCFIQ 10 213 686.7842704398233 1371.5539879464466 2 686.7853881716728 MULTI CID FTMS 0 0 0 14237 192556.21875 0.3539524950616214 -2 0.1650314331054687 19 3 Carbamidomethyl (C) _QNC(Carbamidomethyl (C))C(Carbamidomethyl (C))RSC(Carbamidomethyl (C))FIQ_ REV__ENSG00000115020|ENST00000264380|PIKFYVE;REV__nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 51.629811660486645 0.0705852162080619 4 [AG]N[VS]DDNDE[HS]{I|L} 13 -1 + 74.545 0.0 0.0 5.4351 5.4351 76.767 0.0 0.0 0.0 3.781892398477552 5.197953115119063 3.781892398477552 3.781892398477552 0 1.6237125054200234 1.5228787452803376 0.6549471895720985 1.3737125054200234 [AG]N[VS]DDNDE[HS]{I|L};{[QN]|[E{I|L}]|[KN]}[VS]DDNDE[HS]{I|L};[AG]N[VS]DDNDE{I|L}[HS];[AG]NE[TA]DNDE[HS]{I|L};{[QN]|[E{I|L}]|[KN]}[VS]DDNDE{I|L}[HS];GGQ[VS]DDNDE[HS]{I|L};{[QN]|[E{I|L}]|[KN]}E[TA]DNDE[HS]{I|L};[AG]NE[TA]DNDE{I|L}[HS];[AG]D[KG]DDNDE{I|L}[HS];[AG]{M(Oxidation (M))|F}[HM]DNDE{I|L}[HS] 5.4351;5.1594;5.0561;4.8678;4.7804;4.6273;4.592;4.4888;4.4566;4.4072 -;-;-;-;-;-;-;-;-;- 9797 1 1.127 277914.4 1.0 9396 4858 14237 HBL1_DMSO_200M_050219_2,14256 HBL1_DMSO_200M_050219_2,14256,QNCCRSCFIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14257 75.269 800.0 274140.0 25 0 64315.0 -1 0 63 1140.4764117881382 3418.4074059646146 3 1140.812670886517 MULTI CID FTMS 0 0 0 14237 170087.96875 0.3603952603664502 -2 0.1650314331054687 20 4 VVT 3 -1 9.1567 0.0 0.0 0.26786 0.0 0.0 2165.7636067811386 950.4370258363856 3116.200632617524 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 VVT 0.26786 - 57 + 1 1.127 176350.1 0.8500000238418579 9397 4858 14237 HBL1_DMSO_200M_050219_2,14257 HBL1_DMSO_200M_050219_2,14257, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14259 75.274 137.0 766730.0 25 0 73354.0 + 31114 RLLPPGAVVAV 11 115 546.3502851266338 1090.6860173200675 2 546.3505126833916 MULTI CID FTMS 0 0 0 14258 388380.28125 0.7184080483729215 2 -0.1338043212890625 1 Unmodified _RLLPPGAVVAV_ ENSG00000142544|ENST00000421832|CTU1 32.78568957990786 0.3235288296534633 4 AVVAV 5 6 50.261 0.0 0.0 4.6082 0.0 0.0 633.3996315734763 0.0 633.3996315734763 0.0 19.49810317699217 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 + AVVAV 4.6082 + + 101 1 1.135 91358.6 1.0 9398 4859 14258 HBL1_DMSO_200M_050219_2,14259 HBL1_DMSO_200M_050219_2,14259,RLLPPGAVVAV False True RLLPPGAVVAV 75.274445 546.350512683392 37824816.0 14258.0 ENSG00000142544|ENST00000421832|CTU1 5.979368368784587 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14260 75.276 64.0 600400.0 25 0 57477.0 44365 YLRQRRDL 8 75 560.3224757981357 0 560.3225585818291 PEAK CID FTMS 0 0 0 14258 653262.4375 1.0 0 0.0 2 Unmodified _YLRQRRDL_ ENSG00000141179|ENST00000268896|PCTP;ENST00000417982.6_1_17:53851072-53853458:+|nuORF;nc|ENSG00000141179|Q9UKL6-2|PCTP 15.768221252438446 0.4767174489346095 4 YQE 3 6 16.414 0.0 0.0 1.4674 0.0 0.0 112.10074886013996 583.3480318658811 695.4487807260211 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.5 YQE 1.4674 - 61 + 1 1.135 34326.8 1.0 9399 4859 14258 HBL1_DMSO_200M_050219_2,14260 HBL1_DMSO_200M_050219_2,14260,YLRQRRDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14261 75.277 36.0 1690300.0 25 0 187400.0 + 33545 SILHDVVEV 9 80 505.77994491334033 1009.5453368934808 2 505.7799865603447 MULTI CID FTMS 0 0 0 14258 1763172.25 0.8089317203076393 -1 0.1063156127929687 3 Unmodified _SILHDVVEV_ ENSG00000091640|ENST00000206020|SPAG7;ENST00000572148.1_1_17:4863453-4863890:-|nuORF 74.42276476219924 0.019389277360085 4 {NN|[MP]|[D{I|L}]|[EV]}HVTVVEV 9 4 + 85.927 0.0 0.0 8.5114 8.5114 93.867 0.0 0.0 0.0 15.24227503252014 14.973024840566469 14.973024840566469 9.827796776480469 0 0.7742275032520141 1.3979400086720375 1.4361818737241734 0.0 {NN|[MP]|[D{I|L}]|[EV]}HVTVVEV;{NN|[MP]|[D{I|L}]|[EV]}HVVTVEV;{[TV]|[{I|L}S]}[H{I|L}]DVVEV;[HD]{I|L}VTVVEV;{[TV]|[{I|L}S]}[HV]EVVEV;[HD]V{I|L}TVVEV;[H{I|L}]DVTVVEV;[HD]{I|L}VVTVEV;[HD]VV{I|L}TVEV;[HD]V{I|L}VTVEV 8.5114;7.5379;7.0016;6.5809;6.3092;6.2827;5.9845;5.6074;5.4836;5.3092 -;-;+;-;-;-;-;-;-;- + 572 1 1.135 51783.7 1.0 9400 4859 14258 HBL1_DMSO_200M_050219_2,14261 HBL1_DMSO_200M_050219_2,14261,SILHDVVEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14262 75.278 24.0 2244500.0 25 0 115990.0 + 2225 AQDEHLITF 9 89 537.2668169826329 1072.5190810320655 2 537.2669555544853 MULTI CID FTMS 0 0 0 14258 1160533.5 0.9783874713534332 -1 0.1063156127929687 4 Unmodified _AQDEHLITF_ ENSG00000144028|ENST00000323853|SNRNP200 17.11289562659939 0.3734572693229295 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{M(Oxidation (M))|F}[QA]{I|L}T{M(Oxidation (M))|F} 9 6 + 34.953 0.0 0.0 3.259 3.259 70.513 0.0 0.0 0.0 12.07776317302607 9.714047612776504 9.714047612776504 4.77121254719663 0 0.8182503180159344 0.8860566476931632 0.3807196863200844 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{M(Oxidation (M))|F}[QA]{I|L}T{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{M(Oxidation (M))|F}{I|L}[QA]T{M(Oxidation (M))|F};[NP]PAD[QA]{I|L}T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[QA]{I|L}T{M(Oxidation (M))|F};[H{I|L}]ED[QA]{I|L}T{M(Oxidation (M))|F};[NP]PAD{I|L}[QA]T{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{M(Oxidation (M))|F}KK[{M(Oxidation (M))|F}E];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[YE]{I|L}[{M(Oxidation (M))|F}E];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[QA]T{M(Oxidation (M))|F};[H{I|L}]ED{I|L}[QA]T{M(Oxidation (M))|F} 3.259;2.8141;1.7068;1.5908;1.5426;1.2619;1.166;1.166;1.1459;1.0978 -;-;-;-;-;-;-;-;-;- 408 1 1.135 49211.9 1.0 9401 4859 14258 HBL1_DMSO_200M_050219_2,14262 HBL1_DMSO_200M_050219_2,14262,AQDEHLITF False True AQDEHLITF 75.278364 537.266955554485 11560379.0 14258.0 ENSG00000144028|ENST00000323853|SNRNP200 3.656241496404012 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14263 75.28 36.0 1674200.0 25 0 199360.0 + 18261 KVIEAIRVEL 10 80 390.5800221551781 1168.7182370657342 3 390.5798522830009 MULTI CID FTMS 0 0 0 14258 1265167.875 0.8854248661847398 -1 0.1063156127929687 5 Unmodified _KVIEAIRVEL_ ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1 42.067849460122346 0.1357310407336332 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EA{I|L}EVR{I|L} 10 2 + 49.645 0.0 0.0 4.2478 4.2478 80.526 0.0 0.0 0.0 3.706290716515923 20.259621790487685 3.706290716515923 12.192186200106605 0 1.718765315847925 0.0 0.0 0.2614393726401688 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EA{I|L}EVR{I|L};{[QN]|[E{I|L}]|[KN]}A[{I|L}A]A{I|L}EVK{I|L};{[QN]|[E{I|L}]|[KN]}A[{I|L}A]AE{I|L}VK{I|L};{[QN]|[E{I|L}]|[KN]}A[RV]{I|L}EVK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EA{I|L}R{NN|[MP]|[D{I|L}]|[EV]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RN]ATVR{I|L};{[QN]|[E{I|L}]|[KN]}A[{I|L}A]{I|L}AEVK{I|L};{[QN]|[E{I|L}]|[KN]}A[RV]E{I|L}VK{I|L};{[QN]|[E{I|L}]|[KN]}[RV]A{I|L}EVK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RN]A{I|L}TVR{I|L} 4.2478;3.2046;3.0539;3.0502;3.0079;2.9486;2.947;2.8995;2.8995;2.7979 -;-;-;-;+;-;-;-;-;- + 606 1 1.135 53602.5 1.0 9402 4859 14258 HBL1_DMSO_200M_050219_2,14263 HBL1_DMSO_200M_050219_2,14263,KVIEAIRVEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14264 75.281 53.0 1723900.0 25 0 255020.0 + 16281 IVWLNLLAV 9 83 520.8265615949967 1039.6385702567934 2 520.8271362185478 MULTI CID FTMS 0 0 0 14258 996482.125 0.8431285325545783 -1 0.1063156127929687 6 Unmodified _IVWLNLLAV_ REV__ENSG00000029534|ENST00000289734|ANK1;REV__ENST00000524227.5_1_8:41525962-41555361:-|nuORF;REV__nc|ENSG00000029534|P16157-10|ANK1;REV__nc|ENSG00000029534|P16157-11|ANK1;REV__nc|ENSG00000029534|P16157-12|ANK1;REV__nc|ENSG00000029534|P16157-13|ANK1;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1;REV__nc|ENSG00000029534|P16157-16|ANK1;REV__nc|ENSG00000029534|P16157-2|ANK1;REV__nc|ENSG00000029534|P16157-21|ANK1;REV__nc|ENSG00000029534|P16157-4|ANK1;REV__nc|ENSG00000029534|P16157-5|ANK1;REV__nc|ENSG00000029534|P16157-6|ANK1;REV__nc|ENSG00000029534|P16157-7|ANK1;REV__nc|ENSG00000029534|P16157-8|ANK1;REV__nc|ENSG00000029534|P16157-9|ANK1;REV__nc|ENSG00000029534|P16157|ANK1 23.1484247019978 0.2366544122328345 4 [{I|L}V]{[RE]|[WV]}Q{I|L}{I|L}G{I|L} 9 -1 + 35.313 0.0 0.0 3.3967 3.3967 76.495 0.0 0.0 0.0 2.231450300551664 11.399699876253784 2.231450300551664 9.208187539523752 0 0.7742275032520141 1.0457574905606752 0.0 0.0 [{I|L}V]{[RE]|[WV]}Q{I|L}{I|L}G{I|L};[{I|L}V]{[RE]|[WV]}[AG]{I|L}{I|L}G{I|L} 3.3967;2.5109 -;- 87 1 1.135 74016.2 1.0 9403 4859 14258 HBL1_DMSO_200M_050219_2,14264 HBL1_DMSO_200M_050219_2,14264,IVWLNLLAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14265 75.283 122.0 1566100.0 25 0 240120.0 + 37362 TKPRLHLL 8 142 489.3146740434916 976.6147951537832 2 489.3147155642509 MULTI CID FTMS 0 0 0 14258 975891.5 1.0 0 0.0 7 Unmodified _TKPRLHLL_ REV__ENST00000503413.1_1_4:81189541-81207823:+|nuORF 5.230669730166228 0.792582437072536 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GTP 5 -1 19.208 0.0 0.0 1.9668 0.0 0.0 0.0 484.3704463591144 484.3704463591144 0.5360498482393403 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GTP 1.9668 - 269 1 1.135 145971.2 1.0 9404 4859 14258 HBL1_DMSO_200M_050219_2,14265 HBL1_DMSO_200M_050219_2,14265,TKPRLHLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14266 75.285 67.0 867840.0 25 0 100530.0 + 40599 VLADALKSI 9 74 465.2873836462007 928.5602143592014 2 465.2867614626884 MULTI CID FTMS 0 0 0 14258 659961.9375 0.6723206619684278 1 -0.090057373046875 8 Unmodified _VLADALKSI_ ENSG00000134419|ENST00000322989|RPS15A;ENST00000573554.1_1_16:18800267-18800435:-|nuORF 21.53697664764585 0.2571576504437394 4 [{I|L}V]AD[{I|L}A]KS{I|L} 9 0 + 47.681 0.0 0.0 5.1349 5.1349 77.506 0.0 0.0 0.0 25.107631716619352 5.351132016973494 5.351132016973494 5.351132016973494 0 0.4247425010840047 2.0 0.0 0.0 + + [{I|L}V]AD[{I|L}A]KS{I|L};[{I|L}V]AD[{I|L}A]KTV;[{I|L}V]ADRRS{I|L};[{I|L}V]A[W{I|L}]KS{I|L};[{I|L}V]W[{I|L}A]KS{I|L};[{I|L}V]ADRRTV;[{I|L}V]A[W{I|L}]KTV;[{I|L}V]W[{I|L}A]KTV;[{I|L}V]WRRS{I|L};[{I|L}V]WRRTV 5.1349;4.5586;4.4372;4.4372;4.4372;3.861;3.861;3.861;3.747;3.1707 +;-;-;-;-;-;-;-;-;- + 174 + 1 1.135 50126.0 1.0 9405 4859 14258 HBL1_DMSO_200M_050219_2,14266 HBL1_DMSO_200M_050219_2,14266,VLADALKSI False True VLADALKSI 75.285041 465.286761462688 7846108.0 14258.0 ENSG00000134419|ENST00000322989|RPS15A;;ENST00000573554.1_1_16:18800267-18800435:-|nuORF 3.424936930338541 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14267 75.287 67.0 918610.0 25 0 108320.0 13164 HFRKKRSE 8 82 544.3100605502706 1086.605568167341 2 544.3097411990166 MULTI CID FTMS 0 0 0 14258 622476.0625 0.9830596321636316 -2 0.1970138549804687 9 Unmodified _HFRKKRSE_ ENSG00000127362|ENST00000247879|TAS2R3 5.230669730166228 0.792582437072536 4 V 1 8 10.837 0.0 0.0 0.99737 0.0 0.0 969.526174712066 0.0 969.526174712066 0.0 0.3529053714285357 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.99737 - 45 + 1 1.135 50505.0 1.0 9406 4859 14258 HBL1_DMSO_200M_050219_2,14267 HBL1_DMSO_200M_050219_2,14267,HFRKKRSE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14268 75.288 75.0 807310.0 25 0 60527.0 + 8780 EVTQYLVQE 9 97 554.7798156059187 1107.5450782786372 2 554.7799560427666 MULTI CID FTMS 0 0 0 14258 594851.8125 0.3108058453631335 -2 0.1970138549804687 10 Unmodified _EVTQYLVQE_ ENSG00000187017|ENST00000645284|ESPN 52.268347100219714 0.0353964759249114 4 {NN|[MP]|[D{I|L}]|[EV]}TQY{I|L} 6 3 49.179 0.0 0.0 4.4404 0.0 0.0 0.0 371.1563813394373 371.1563813394373 23.21787055947101 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.8494850021680087 0.9247425010840048 + {NN|[MP]|[D{I|L}]|[EV]}TQY{I|L} 4.4404 + + 1066 1 1.135 50659.7 1.0 9407 4859 14258 HBL1_DMSO_200M_050219_2,14268 HBL1_DMSO_200M_050219_2,14268,EVTQYLVQE True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14269 75.29 86.0 1007100.0 25 0 68392.0 + 30769 RIADSFQVI 9 120 524.7934283657584 1047.5723037983166 2 524.7928954958916 MULTI CID FTMS 0 0 0 14258 538889.3125 0.4752548818712661 -1 0.1063156127929687 11 Unmodified _RIADSFQVI_ ENSG00000266412|ENST00000581486|NCOA4;nc|ENSG00000266412|Q13772-3|NCOA4;nc|ENSG00000266412|Q13772-4|NCOA4 26.268140514670165 0.1969607489560049 4 [AG]A[KQ]S{M(Oxidation (M))|F}QV{I|L} 10 4 + 56.876 0.0 0.0 5.4293 5.4293 71.748 0.0 0.0 0.0 5.183791672025706 39.64076805721015 5.183791672025706 1.2057393120584976 0 0.7742275032520141 1.5228787452803376 0.6694451763165201 0.0 [AG]A[KQ]S{M(Oxidation (M))|F}QV{I|L};[AG]A[KA]GS{M(Oxidation (M))|F}QV{I|L};[QA][KQ]S{M(Oxidation (M))|F}QV{I|L};[AG]A[KQ]S{M(Oxidation (M))|F}[AG]V{I|L};[QA][KA]GS{M(Oxidation (M))|F}QV{I|L};[AG]A[KA]GS{M(Oxidation (M))|F}[AG]V{I|L};[KA]QQS{M(Oxidation (M))|F}QV{I|L};[KA][QA]GS{M(Oxidation (M))|F}QV{I|L};{[DA]|[EG]}[R{I|L}]S{M(Oxidation (M))|F}QV{I|L};[QA][KQ]S{M(Oxidation (M))|F}[AG]V{I|L} 5.4293;5.3142;4.5749;4.5545;4.4557;4.4428;4.2915;4.1722;3.9949;3.6959 -;-;-;-;-;-;-;-;-;- 440 1 1.135 74277.3 1.0 9408 4859 14258 HBL1_DMSO_200M_050219_2,14269 HBL1_DMSO_200M_050219_2,14269,RIADSFQVI False True RIADSFQVI 75.290328 524.792895495892 20922064.0 14258.0 nc|ENSG00000266412|Q13772-3|NCOA4;;ENSG00000266412|ENST00000581486|NCOA4;;nc|ENSG00000266412|Q13772-4|NCOA4 2.02009916305542 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14270 75.292 90.0 757570.0 25 0 87531.0 + 3045 AVLDTGASIHL 11 98 548.8040514828875 1095.593550032575 2 548.8041869997978 MULTI CID FTMS 0 0 0 14258 503216.40625 0.5707011785780256 -1 0.1063156127929687 12 Unmodified _AVLDTGASIHL_ ENSG00000164002|ENST00000415550|EXO5 65.23502041540118 0.047899150100457 4 {[VA]|[{I|L}G]}{I|L}DTGAS{I|L}{I|L}H 11 2 + 86.844 0.0 0.0 7.9266 7.9266 79.073 0.0 0.0 0.0 27.367585652254185 1.0354059190706977 1.0354059190706977 0.5551732784983159 0 0.7742275032520141 2.0 1.1549471895720984 0.0 {[VA]|[{I|L}G]}{I|L}DTGAS{I|L}{I|L}H;{[VA]|[{I|L}G]}{I|L}DTQS{I|L}{I|L}H;{[VA]|[{I|L}G]}{I|L}DTGAS{I|L}H{I|L};{[VA]|[{I|L}G]}{I|L}DTQS{I|L}H{I|L};{[VA]|[{I|L}G]}{I|L}DT[KA]E{I|L}H;{[VA]|[{I|L}G]}{I|L}DT[KA]EH{I|L};{[VA]|[{I|L}G]}{I|L}DTGA[H{I|L}]TV;{[VA]|[{I|L}G]}{I|L}DTQ[H{I|L}]TV;{[VA]|[{I|L}G]}{I|L}D[C(Carbamidomethyl (C))R]{I|L}{I|L}H;{[VA]|[{I|L}G]}{I|L}D[C(Carbamidomethyl (C))R]{I|L}H{I|L} 7.9266;7.876;7.8321;7.7814;6.4393;6.3448;5.8901;5.8394;5.839;5.7445 -;-;+;-;-;-;-;-;-;- + 1266 + 1 1.135 58665.4 1.0 9409 4859 14258 HBL1_DMSO_200M_050219_2,14270 HBL1_DMSO_200M_050219_2,14270,AVLDTGASIHL True True AVLDTGASIHL 75.292331 548.804186999798 10856133.0 14258.0 ENSG00000164002|ENST00000415550|EXO5 6.07185697555542 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14271 75.294 74.0 989970.0 25 0 88987.0 + 4951 DGNAILREI 9 108 500.7766842163591 999.5388154995184 2 500.7761108279228 MULTI CID FTMS 0 0 0 14258 448916.9375 0.4005961308549781 -2 0.1970138549804687 13 Unmodified _DGNAILREI_ ENSG00000163468|ENST00000295688|CCT3;ENST00000368256.3_1_1:156302875-156308050:-|nuORF 17.44264345198275 0.3645313841742926 4 [DG]NA{I|L}{I|L}{[RE]|[WV]}{I|L} 9 0 [DG]N + + 32.396 10.783 3.7689 3.2411 3.2411 46.508 0.0 0.0 0.0 0.0 10.96591481520636 0.0 0.0 0 1.0 0.0 0.0 0.0 + + [DG]NA{I|L}{I|L}{[RE]|[WV]}{I|L} 3.2411 + + 422 + 1 1.135 57238.9 1.0 9410 4859 14258 HBL1_DMSO_200M_050219_2,14271 HBL1_DMSO_200M_050219_2,14271,DGNAILREI False True DGNAILREI 75.294051 500.776110827923 10068586.0 14258.0 ENST00000368256.3_1_1:156302875-156308050:-|nuORF;;ENSG00000163468|ENST00000295688|CCT3 3.234220147132873 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14272 75.299 258.0 397470.0 25 0 38145.0 + 30049 TQLDPNKSLLEV 12 117 678.8713702489881 1355.728187564776 2 678.8719970583916 MULTI CID FTMS 0 0 0 14258 363932.625 0.8951534240961067 -1 0.1063156127929687 14 Unmodified _QTYYLKISLEV_ ENSG00000185104|ENST00000396153|FAF1;nc|ENSG00000185104|Q9UNN5-2|FAF1 55.23464941255904 0.0886405999673349 4 [QT]{I|L}D[NP]KS{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 12 6 + 72.74 0.0 0.0 5.3654 5.3654 80.768 0.0 0.0 0.0 9.556204968171812 38.141046551407214 9.556204968171812 7.54554718523508 0 1.9634679910804405 0.9208187539523752 1.635151878060192 0.5484550065040281 [QT]{I|L}D[NP]KS{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[QT]{I|L}DVV{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[NP]KS{I|L}{I|L}E{[QS]|[NT]}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[QT]{I|L}YYKS{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[NP]KS{I|L}{I|L}D[QT]{I|L}{NN|[MP]|[D{I|L}]|[EV]};[NP]KS{I|L}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T]P{I|L}[{M(Oxidation (M))|F}V]D{I|L}[NP];{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T]P{I|L}E{[QS]|[NT]}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[QT]{I|L}[QP]SAAS{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[QT]{I|L}[QP][QT]S{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 5.3654;4.8088;4.4439;4.2511;4.1433;4.069;4.0145;3.957;3.9378;3.892 -;-;-;-;-;-;-;-;-;- 4641 1 1.135 80277.6 1.0 9411 4859 14258 HBL1_DMSO_200M_050219_2,14272 HBL1_DMSO_200M_050219_2,14272,QTYYLKISLEV True False TQLDPNKSLLEV 75.298856 678.871997058392 3589369.0 14258.0 ENSG00000185104|ENST00000396153|FAF1;;nc|ENSG00000185104|Q9UNN5-2|FAF1 5.453110535939534 2.0 False 12.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14273 75.301 129.0 512950.0 25 0 69080.0 + + 22364 LPSPISPDI 9 97 469.7627333149034 937.5109136966068 2 469.7635986208916 MULTI CID FTMS 0 0 0 14258 298482.1875 0.9585367953777144 5 -0.4949798583984375 15 Unmodified _LPSPLSPDL_ ENSG00000136021|ENST00000360820|SCYL2 61.357469665136826 0.0253304979873734 4 [{I|L}P]SP{I|L}SPD{I|L} 9 -1 + 63.031 0.0 0.0 6.7232 6.7232 85.22 0.0 0.0 0.0 6.53212513775344 14.124628150806371 6.53212513775344 6.53212513775344 0 1.4731975075880328 1.6989700043360187 0.9247425010840048 0.0 [{I|L}P]SP{I|L}SPD{I|L};[PS]{I|L}P{I|L}SPD{I|L};[VP]TP{I|L}SPD{I|L};[{I|L}P]SS[{I|L}P]PD{I|L};{[TV]|[{I|L}S]}PP{I|L}SPD{I|L};[PS]{I|L}S[{I|L}P]PD{I|L};[{I|L}P]S[R{I|L}][HC]{I|L};[{I|L}P][VG]{I|L}DPD{I|L};[{I|L}P][R{I|L}]DPD{I|L};[{I|L}P]AVVDPD{I|L} 6.7232;6.0264;4.8076;4.7231;4.5899;4.0264;3.4151;3.2218;3.173;3.1184 +;-;-;-;-;-;-;-;-;- + 450 1 1.135 54580.9 1.0 9412 4859 14258 HBL1_DMSO_200M_050219_2,14273 HBL1_DMSO_200M_050219_2,14273,LPSPLSPDL False False LPSPISPDI 75.30148 469.763598620892 3218269.0 14258.0 ENSG00000136021|ENST00000360820|SCYL2 4.203079382578532 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14274 75.306 251.0 593980.0 25 0 40056.0 + 32268 RWPDYVREL 9 122 411.88402130637087 1232.6302345193126 3 411.8838378787041 MULTI CID FTMS 0 0 0 14258 269203.9375 0.2332945417501861 -15 1.4274063110351562 16 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 57.72198328787511 0.0273433238377839 4 [WR]PDYS 6 4 36.187 0.0 0.0 2.9357 0.0 0.0 0.0 425.2435738273009 425.2435738273009 16.28990844943943 0.0 0.0 0.0 0 1.1677353201839438 1.5228787452803376 0.0 0.5010912013506126 [WR]PDYS 2.9357 - 865 1 1.135 121898.7 1.0 9413 4859 14258 HBL1_DMSO_200M_050219_2,14274 HBL1_DMSO_200M_050219_2,14274,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14275 75.318 700.0 468780.0 25 0 16351.0 + 26260 NQLMCEMQDNY 11 195 694.7682053883606 1387.521857843521 2 694.7687255740166 MULTI CID FTMS 0 0 0 14258 253500.4375 0.6571349322833018 -1 0.1063156127929687 17 Unmodified _NQLMCEMQDNY_ REV__ENST00000451446.1_1_13:24697062-24697869:-|nuORF 26.268140514670165 0.4754186812857754 4 {I|L}E{I|L}EDN 6 -1 83.061 0.0 0.0 5.9863 0.0 0.0 0.0 671.2000826471311 671.2000826471311 20.18997564822188 0.0 0.0 0.0 0 1.274227503252014 0.744727494896694 1.192323921596858 1.6307196863200843 {I|L}E{I|L}EDN 5.9863 - 4659 + 1 1.135 227542.0 1.0 9414 4859 14258 HBL1_DMSO_200M_050219_2,14275 HBL1_DMSO_200M_050219_2,14275,NQLMCEMQDNY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14276 75.332 800.0 380850.0 25 0 28122.0 + 6015 DSALLPAV 8 230 393.2234758749538 784.4323988167076 2 393.2235595583916 MULTI CID FTMS 0 0 0 14258 245876.609375 0.3974903257610945 -1 0.1063156127929687 18 Unmodified _DSALLPAV_ ENSG00000269404|ENST00000595883|SPIB;nc|ENSG00000269404|Q01892-3|SPIB 90.83580072412532 0.0563165270037559 4 {[DS]|[MA]|[CV]|TT}A{I|L}{I|L}PAV 8 0 + 45.402 0.0 0.0 5.7879 5.7879 75.237 0.0 0.0 0.0 2.205524691775466 6.721675119240516 2.205524691775466 2.205524691775466 0 1.0994850021680094 0.0 1.8243923658886183 0.0 + + {[DS]|[MA]|[CV]|TT}A{I|L}{I|L}PAV;[PA]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}PAV;[{I|L}A]SD{I|L}PAV;{I|L}{I|L}D{[SA]|[TG]}PAV;[PA]{I|L}{[MS]|[{M(Oxidation (M))|F}A]}PAV;{[DS]|[MA]|[CV]|TT}A{I|L}P{I|L}AV;{[DS]|[MA]|[CV]|TT}A{I|L}PA{I|L}V;[PA]{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}AV;[PA]{[MS]|[{M(Oxidation (M))|F}A]}PA{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{[SA]|[TG]}{I|L}PAV 5.7879;5.5067;4.5781;4.1905;4.1253;3.718;3.5855;3.4368;3.3043;3.0625 +;-;-;-;-;-;-;-;-;- + 428 1 1.135 234335.0 0.8299999833106995 9415 4859 14258 HBL1_DMSO_200M_050219_2,14276 HBL1_DMSO_200M_050219_2,14276,DSALLPAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14277 75.345 729.0 195400.0 25 0 42633.0 + -1 QFPCSIFYFQL 11 167 725.3464088611389 1448.6782647890775 2 725.3464843630791 MULTI CID FTMS 0 0 0 14258 236436.015625 0.9041014870447752 -1 0.1063156127929687 19 Carbamidomethyl (C) _QFPC(Carbamidomethyl (C))SIFYFQL_ REV__nc|ENSG00000064999|Q92625-2|ANKS1A 8.745405648335112 0.8338865417133445 4 {[QN]|[E{I|L}]|[KN]}{I|L}EDNDD{M(Oxidation (M))|F}QD 11 -1 81.264 0.0 0.0 5.6095 0.0 0.0 0.0 112.16139402175271 112.16139402175271 44.07991857825564 0.0 0.0 0.0 0 0.0 0.721246399047171 0.3054621874040891 2.909379381312206 {[QN]|[E{I|L}]|[KN]}{I|L}EDNDD{M(Oxidation (M))|F}QD 5.6095 - 14233 1 1.135 100683.4 1.0 9416 4859 14258 HBL1_DMSO_200M_050219_2,14277 HBL1_DMSO_200M_050219_2,14277,QFPCSIFYFQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14278 75.359 800.0 118430.0 25 0 30610.0 + 26646 NYFCRNEMS 9 59 1163.4621722170982 1162.4548957504985 1 1163.466723620892 MULTI CID FTMS 0 0 0 14258 201525.984375 0.773469935683017 -2 0.1970138549804687 20 Unmodified _NYFCRNEMS_ REV__ENSG00000113924|ENST00000283871|HGD 1.844237919475145 0.850302753031785 4 E 1 -1 6.9897 0.0 0.0 0.60129 0.0 0.0 506.22691773124217 524.1616304986936 1030.388548229936 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.60129 + + 3 + 1 1.135 84116.4 0.8899999856948853 9417 4859 14258 HBL1_DMSO_200M_050219_2,14278 HBL1_DMSO_200M_050219_2,14278,NYFCRNEMS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14280 75.363 3.3 12407000.0 25 0 2783300.0 + 26211 NQIEDNDDFQL 11 54 675.7937284084774 1349.5729038837546 2 675.7952148318291 MULTI CID FTMS 0 0 0 14279 17535846.0 1.0 0 0.0 1 Unmodified _NQIEDNDDFQL_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 28.49450938151212 0.4231428536161201 4 {[QN]|[E{I|L}]|[KN]}{I|L}ED 5 6 24.208 0.0 0.0 1.7938 0.0 0.0 0.0 747.2931546984609 747.2931546984609 7.833012287035498 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + {[QN]|[E{I|L}]|[KN]}{I|L}ED 1.7938 + + 68 1 1.14 38379.7 1.0 9418 4860 14279 HBL1_DMSO_200M_050219_2,14280 HBL1_DMSO_200M_050219_2,14280,NQIEDNDDFQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14281 75.364 20.0 2185900.0 25 0 186910.0 + 25340 NALDYIRTV 9 68 532.790150113106 1063.565747293012 2 532.7906371951103 MULTI CID FTMS 0 0 0 14279 1962804.375 0.616416310908288 1 -0.0437469482421875 2 Unmodified _NALDYIRTV_ ENSG00000105618|ENST00000321030|PRPF31;ENST00000466404.5_1_19:54621832-54631576:+|nuORF;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;nc|ENSG00000105618|Q8WWY3-2|PRPF31;nc|ENSG00000105618|Q8WWY3-3|PRPF31;nc|ENSG00000105618|Q8WWY3-4|PRPF31 40.23920728925047 0.0741434193262949 4 {[QG]|[NA]}{I|L}DY{I|L} 6 3 66.159 0.0 0.0 6.2205 0.0 0.0 0.0 371.2053011529906 371.2053011529906 55.44531259372398 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.4247425010840047 0.0 + {[QG]|[NA]}{I|L}DY{I|L} 6.2205 + + 79 + 1 1.14 40198.4 1.0 9419 4860 14279 HBL1_DMSO_200M_050219_2,14281 HBL1_DMSO_200M_050219_2,14281,NALDYIRTV True True NALDYIRTV 75.364299 532.79063719511 22802888.0 14279.0 ENST00000466404.5_1_19:54621832-54631576:+|nuORF;;nc|ENSG00000105618|Q8WWY3-3|PRPF31;;ENST00000498612.1_1_19:54622012-54631467:+|nuORF;;nc|ENSG00000105618|Q8WWY3-2|PRPF31;;ENSG00000105618|ENST00000321030|PRPF31;;nc|ENSG00000105618|Q8WWY3-4|PRPF31 7.927202383677165 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14282 75.365 5.0 10891000.0 25 0 1132100.0 + 10584 FVIRNIVEA 9 65 530.8112621275001 1059.6079713218 2 530.8117553591728 MULTI CID FTMS 0 0 0 14279 9423151.0 0.3819239580225159 -2 0.1963729858398437 3 Unmodified _FVIRNIVEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 37.97399986684836 0.0865783450051559 4 VEA 3 6 26.899 0.0 0.0 2.5386 0.0 0.0 742.449934067697 0.0 742.449934067697 0.0 9.451687839877891 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 + VEA 2.5386 + + 64 + 1 1.14 49638.0 1.0 9420 4860 14279 HBL1_DMSO_200M_050219_2,14282 HBL1_DMSO_200M_050219_2,14282,FVIRNIVEA True True FVIRNIVEA 75.365478 530.811755359173 567020736.0 14279.0 ENST00000465478.1_1_8:93156318-93156576:-|nuORF;;ENSG00000197728|ENST00000646449|RPS26;;nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENST00000447425.1_1_7:22813267-22813561:-|nuORF 5.521750450134277 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14283 75.367 31.0 2236100.0 25 0 364530.0 + 34913 SQIHDIVLV 9 75 512.295183320633 1022.575813708066 2 512.2957641482353 MULTI CID FTMS 0 0 0 14279 1657417.875 0.0910156873790378 -3 0.2870712280273437 4 Unmodified _SQIHDIVLV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 23.78978130925829 0.2284941198415988 4 {[TV]|[{I|L}S]}QHD{I|L}V{I|L}V 9 2 + 58.962 0.0 0.0 5.766 5.766 79.559 0.0 0.0 0.0 18.834420219276154 9.889917747712644 9.889917747712644 4.771212547196626 0 0.7742275032520141 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}QHD{I|L}V{I|L}V;{[TV]|[{I|L}S]}QHDV{I|L}{I|L}V;{[TV]|[{I|L}S]}[AG]HD{I|L}V{I|L}V;{[TV]|[{I|L}S]}[AG]HDV{I|L}{I|L}V;{[QS]|[NT]}{I|L}HD{I|L}V{I|L}V;{[QS]|[NT]}{I|L}HDV{I|L}{I|L}V;[HD]{I|L}{[QS]|[NT]}{I|L}V{I|L}V;[{I|L}V][HD][QT]V{I|L}V;[HD]{I|L}V[QT]V{I|L}V;[HD]{I|L}{[QS]|[NT]}V{I|L}{I|L}V 5.766;5.2995;4.8656;4.399;3.9242;3.4576;2.6308;2.4085;2.3364;2.1642 -;-;-;-;+;-;-;-;-;- + 275 1 1.14 58649.2 1.0 9421 4860 14279 HBL1_DMSO_200M_050219_2,14283 HBL1_DMSO_200M_050219_2,14283,SQIHDIVLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14284 75.368 32.0 1960900.0 25 0 292880.0 + + 10604 VFLEAAKAL 9 92 480.8014878622088 959.5884227912176 2 480.8014099001884 MULTI CID FTMS 0 0 0 14279 1499409.0 0.6090002458284556 2 -0.18353271484375 5 Unmodified _FVLLPKML_ ENST00000426028.2_1_9:29824858-29825224:-|nuORF;ENSG00000082212|ENST00000321341|ME2 11.114462752807354 0.7467182956244686 4 [{M(Oxidation (M))|F}V]{I|L}{I|L}E{I|L} 6 -1 22.625 0.0 0.0 2.3577 0.0 0.0 0.0 242.1419255590488 242.1419255590488 4.622114391105999 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 [{M(Oxidation (M))|F}V]{I|L}{I|L}E{I|L} 2.3577 - 110 1 1.14 50918.4 1.0 9422 4860 14279 HBL1_DMSO_200M_050219_2,14284 HBL1_DMSO_200M_050219_2,14284,FVLLPKML False False VFLEAAKAL 75.367836 480.801409900188 3680918.75 14279.0 ENST00000426028.2_1_9:29824858-29825224:-|nuORF;;ENSG00000082212|ENST00000321341|ME2 2.5596412817637124 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14285 75.369 40.0 1266300.0 25 0 188900.0 + 41939 VQIDDSYLVEA 11 80 626.3087144847048 1250.6028760362094 2 626.3093139529228 MULTI CID FTMS 0 0 0 14279 1347244.5 0.6134734063486162 -2 0.1963729858398437 6 Unmodified _VQIDDSYLVEA_ ENSG00000140548|ENST00000268154|ZNF710 51.41523569358685 0.1097924807909074 4 {NN|[MP]|[D{I|L}]|[EV]}QDVSY{I|L}[W{I|L}] 10 6 + 55.096 0.0 0.0 4.4056 4.4056 78.281 0.0 0.0 0.0 0.0048552562362473 29.98053473169249 0.0048552562362473 9.164539485499247 0 0.5 1.154901959985743 1.3664934734859662 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}QDVSY{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}[AG]DVSY{I|L}[W{I|L}];{[{M(Oxidation (M))|F}C]|[YS]}DD{I|L}VQ{I|L}[W{I|L}];{[CP]|[EA]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]VQ{I|L}[W{I|L}];{[{M(Oxidation (M))|F}C]|[YS]}D{I|L}DVQ{I|L}[W{I|L}];{[{M(Oxidation (M))|F}C]|[YS]}D{I|L}VDQ{I|L}[W{I|L}];{[CP]|[EA]}[VG]DVSY{I|L}[W{I|L}];{[{M(Oxidation (M))|F}C]|[YS]}DD{I|L}V[AG]{I|L}[W{I|L}];{[CP]|[EA]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]V[AG]{I|L}[W{I|L}];{[TV]|[{I|L}S]}{[YD]|[{M(Oxidation (M))|F}M]}DVQ{I|L}[W{I|L}] 4.4056;3.6728;3.5688;3.5388;3.2211;2.9804;2.6709;2.4963;2.4664;2.4041 -;-;-;-;-;-;-;-;-;- 554 1 1.14 45790.1 1.0 9423 4860 14279 HBL1_DMSO_200M_050219_2,14285 HBL1_DMSO_200M_050219_2,14285,VQIDDSYLVEA True True VQIDDSYLVEA 75.369013 626.309313952923 44279876.0 14279.0 ENSG00000140548|ENST00000268154|ZNF710 6.330566724141439 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14286 75.37 30.0 2350100.0 25 0 218950.0 + 41008 VMAPRTVLL 9 95 500.3047063217554 998.5948597103109 2 500.3049804568291 MULTI CID FTMS 0 0 0 14279 1340934.0 0.046640027558274 -4 0.3614044189453125 7 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 26.268140514670165 0.1969607489560049 4 VWA{I|L}{I|L}WV{I|L} 8 5 + 54.322 0.0 0.0 5.4398 5.4398 80.826 0.0 0.0 0.0 18.96713777483761 3.8764005203222496 3.8764005203222496 7.257724967479859 0 0.4247425010840047 0.0 0.0 0.0 VWA{I|L}{I|L}WV{I|L};VWA{I|L}{I|L}W{I|L}V;V[VS]A{I|L}{I|L}{[DA]|[EG]}V{I|L};V[VS]A{I|L}{I|L}{[DA]|[EG]}{I|L}V;[DG]N[RV]KVV{I|L} 5.4398;4.713;3.5902;2.8634;0.69945 -;-;-;-;- 341 + 1 1.14 59327.4 1.0 9424 4860 14279 HBL1_DMSO_200M_050219_2,14286 HBL1_DMSO_200M_050219_2,14286,VMAPRTVLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14287 75.372 51.0 1239500.0 25 0 201520.0 + 39583 VCTPRLLL 8 71 457.77859267541527 0 457.7791320681572 PEAK CID FTMS 0 0 0 14279 1151867.375 0.2386694583019551 4 -0.4049224853515625 8 Unmodified _VCTPRLLL_ REV__ENST00000489327.1_1_2:69705990-69736406:-|nuORF 25.399314129420983 0.3159236278339657 4 {I|L} 1 -1 11.594 0.0 0.0 1.2691 0.0 0.0 131.09495742011876 666.3407640917118 797.4357215118305 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L} 1.2691 + + 16 1 1.14 55884.0 1.0 9425 4860 14279 HBL1_DMSO_200M_050219_2,14287 HBL1_DMSO_200M_050219_2,14287,VCTPRLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14288 75.373 51.0 1145800.0 25 0 99945.0 + 3305 AYKPPGFSL 9 87 490.2661155681772 978.5176782031544 2 490.2663757205009 MULTI CID FTMS 0 0 0 14279 955100.75 1.0 0 0.0 9 Unmodified _AYKPPGFSL_ ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 46.020951573049366 0.0490941689151868 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG]PK{M(Oxidation (M))|F}S{I|L} 9 2 + 40.414 0.0 0.0 4.1301 4.1301 73.931 0.0 0.0 0.0 2.7943153064227744 18.41900898946428 2.7943153064227744 5.740312677277174 0 1.1989700043360187 2.0 0.9604093769761876 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG]PK{M(Oxidation (M))|F}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG]PK{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}P]G{I|L};{[TV]|[{I|L}S]}[YR]PKDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KQ[RN]S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}V][PA];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV][RD]S{I|L};{[TV]|[{I|L}S]}[YR]P[SG]S{I|L};[VS]{[DS]|[MA]|[CV]|TT}PK{M(Oxidation (M))|F}S{I|L};[VS]{[DS]|[MA]|[CV]|TT}PK{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 4.1301;3.5435;3.4967;2.769;2.1744;2.0326;1.7038;0.93998;0.92442;0.33778 -;-;-;-;-;-;-;-;-;- 195 1 1.14 52491.1 1.0 9426 4860 14279 HBL1_DMSO_200M_050219_2,14288 HBL1_DMSO_200M_050219_2,14288,AYKPPGFSL True True AYKPPGFSL 75.372849 490.266375720501 12793080.0 14279.0 ENSG00000155561|ENST00000285968|NUP205;;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 7.436257998148601 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14289 75.374 41.0 1689400.0 25 0 181090.0 21358 LPFLWSLL 8 88 494.7947335909252 987.5749142486504 2 494.7955505251884 MULTI CID FTMS 0 0 0 14279 902946.3125 0.1002169512457163 3 -0.2342605590820312 10 Unmodified _LPFLWSLL_ CUBN|p.N3229Mfs*32|1|0.14|ENSG00000107611|chr10:16841025-16841025|T/-|frameshift_variant;ENSG00000107611|ENST00000377833|CUBN 32.116972079565 0.368454113111938 4 {I|L}P{M(Oxidation (M))|F} 3 5 45.662 0.0 0.0 4.6236 0.0 0.0 0.0 627.3477877252561 627.3477877252561 24.23516269895728 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 + {I|L}P{M(Oxidation (M))|F} 4.6236 + + 786 + 1 1.14 55140.6 1.0 9427 4860 14279 HBL1_DMSO_200M_050219_2,14289 HBL1_DMSO_200M_050219_2,14289,LPFLWSLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14290 75.375 57.0 1366900.0 25 0 156530.0 + -1 VMAPRTLLL 9 105 515.3099999772943 1028.6054470213885 2 515.3106567263603 MULTI CID FTMS 0 0 0 14279 846671.125 0.4241836381500489 -3 0.2870712280273437 11 Oxidation (M) _VM(Oxidation (M))APRTLLL_ ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 26.268140514670165 0.1969607489560049 4 AD{I|L} 3 -1 38.188 0.0 0.0 3.7126 0.0 0.0 711.4652452118315 0.0 711.4652452118315 0.0 21.197887582883936 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.0 AD{I|L} 3.7126 - 162 1 1.14 64735.6 1.0 9428 4860 14279 HBL1_DMSO_200M_050219_2,14290 HBL1_DMSO_200M_050219_2,14290,VMAPRTLLL False False VMAPRTLLL 75.37547 515.31065672636 39051852.0 14279.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 5.085302352905273 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14291 75.377 67.0 1384400.0 25 0 182390.0 + 17153 KLIEKLDIKL 10 110 404.9358592456331 1211.7857483370992 3 404.9357482790947 MULTI CID FTMS 0 0 0 14279 696342.8125 0.6936001873093437 -1 0.090057373046875 12 Unmodified _KLIEKLDIKL_ ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF 74.09353968926766 0.0188047629662086 4 [K{I|L}]{I|L}EK{I|L}D{I|L}K{I|L} 10 0 + 80.689 0.0 0.0 6.6587 6.6587 75.937 0.0 0.0 0.0 7.269987279362624 0.7918124604762511 0.7918124604762511 0.7918124604762511 0 2.261922997584469 0.0 1.1989700043360187 0.1923877696554315 + + [K{I|L}]{I|L}EK{I|L}D{I|L}K{I|L};[K{I|L}]{I|L}EK{I|L}D{I|L}{I|L}K;[K{I|L}]{I|L}{I|L}[SG]{I|L}D{I|L}K{I|L};[K{I|L}]{I|L}{I|L}[SG]{I|L}D{I|L}{I|L}K;{I|L}{I|L}KED{I|L}K{I|L}[K{I|L}];{I|L}{I|L}KEDK{I|L}{I|L}[K{I|L}];{I|L}{I|L}KEKD{I|L}{I|L}[K{I|L}];{I|L}{I|L}KE{I|L}DK{I|L}[K{I|L}];[K{I|L}]{I|L}ED{I|L}K{I|L}[K{I|L}];[K{I|L}]{I|L}EDK{I|L}{I|L}[K{I|L}] 6.6587;6.5934;5.7861;5.7208;5.354;5.2087;5.0024;4.9722;4.8336;4.6882 +;-;-;-;-;-;-;-;-;- + 1487 + 1 1.14 77664.2 1.0 9429 4860 14279 HBL1_DMSO_200M_050219_2,14291 HBL1_DMSO_200M_050219_2,14291,KLIEKLDIKL True True KLIEKLDIKL 75.377061 404.935748279095 6928382.5 14279.0 ENSG00000167658|ENST00000309311|EEF2;;ENST00000598182.5_1_19:3980752-3982305:-|nuORF 3.8866727352142334 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14292 75.379 83.0 665380.0 25 0 72514.0 15902 ISSWTCLLDL 10 88 575.796610077626 1149.578667222052 2 575.7966186404228 MULTI CID FTMS 0 0 0 14279 604700.4375 0.7271643160032928 -1 0.090057373046875 13 Unmodified _ISSWTCLLDL_ ENSG00000103184|ENST00000251170|SEC14L5 24.020572477871973 0.4289996903560794 4 V{I|L}K{I|L}EV 6 9 26.247 0.0 0.0 2.2832 0.0 0.0 450.1252308576188 0.0 450.1252308576188 0.0 10.762743881329513 0.0 0.0 0 0.6237125054200234 0.0 0.0 0.0 V{I|L}K{I|L}EV 2.2832 - 235 1 1.14 48842.3 1.0 9430 4860 14279 HBL1_DMSO_200M_050219_2,14292 HBL1_DMSO_200M_050219_2,14292,ISSWTCLLDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14293 75.382 153.0 873640.0 25 0 123390.0 -1 0 84 571.3814373793776 570.3741609127776 1 571.3813354372978 MULTI CID FTMS 0 0 0 14279 565725.8125 0.1289071707921573 4 -0.4049224853515625 14 4 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}{I|L} 5 -1 + 55.956 0.0 0.0 9.8103 9.8103 86.922 0.0 0.0 0.0 3.534087492996392 16.020599913279625 3.534087492996392 3.534087492996392 0 0.3252574989159953 1.6989700043360187 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}{I|L};[{I|L}V]N{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V{I|L};{I|L}VN{I|L}{I|L};[{I|L}V]QV{I|L};[{I|L}V]GG{I|L}{I|L};{I|L}VQ{I|L}V;{I|L}VGG{I|L}{I|L};{[NV]|[RG]}{I|L}{I|L}{I|L};[{I|L}V][AG]V{I|L} 9.8103;9.1907;8.4036;8.1923;7.784;6.905;5.9962;5.9066;5.6062;5.4982 -;-;-;-;-;-;-;-;-;- 99 1 1.14 107322.1 1.0 9431 4860 14279 HBL1_DMSO_200M_050219_2,14293 HBL1_DMSO_200M_050219_2,14293, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14294 75.386 182.0 873400.0 25 0 188570.0 + 32260 RWPDYVREL 9 100 617.3224849501827 1232.6304169671653 2 617.3228027224541 MULTI CID FTMS 0 0 0 14279 539558.0625 0.2108461798402528 -17 1.6380462646484375 15 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 42.312485326615175 0.0627620958981271 4 {I|L}{M(Oxidation (M))|F}RVYDPW 8 8 58.849 0.0 0.0 4.7743 0.0 0.0 0.0 153.07842432193596 153.07842432193596 38.92790030352131 0.0 0.0 0.0 0 1.742992819099939 0.0 0.0 0.805462187404089 {I|L}{M(Oxidation (M))|F}RVYDPW 4.7743 - 498 + 1 1.14 118647.1 1.0 9432 4860 14279 HBL1_DMSO_200M_050219_2,14294 HBL1_DMSO_200M_050219_2,14294,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14295 75.387 50.0 1139100.0 25 0 130430.0 + 15924 ISYDRTLVI 9 92 540.30721700034 1078.5998810674798 2 540.3085204958916 MULTI CID FTMS 0 0 0 14279 473629.21875 1.0 0 0.0 16 Unmodified _ISYDRTLVI_ ENSG00000166908|ENST00000354947|PIP4K2C;nc|ENSG00000166908|Q8TBX8-3|PIP4K2C 31.26834338654808 0.1333407332142048 4 {I|L}S 2 7 34.776 0.0 0.0 3.2242 0.0 0.0 0.0 875.4672855322451 875.4672855322451 16.549471895720984 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3807196863200844 0.0 + {I|L}S 3.2242 + + 208 + 1 1.14 50868.0 1.0 9433 4860 14279 HBL1_DMSO_200M_050219_2,14295 HBL1_DMSO_200M_050219_2,14295,ISYDRTLVI False True ISYDRTLVI 75.386863 540.308520495892 4069501.0 14279.0 ENSG00000166908|ENST00000354947|PIP4K2C;;nc|ENSG00000166908|Q8TBX8-3|PIP4K2C -0.2478432854016622 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14296 75.39 170.0 701290.0 25 0 98475.0 + + 29541 DAVQLNVI 8 132 436.2478764930413 870.4812000528825 2 436.2481567263603 MULTI CID FTMS 0 0 0 14279 465021.40625 0.2665023633444879 -2 0.1963729858398437 17 Unmodified _QLNVTPLS_ ENST00000524933.1_1_11:13716477-13732426:+|nuORF;ENSG00000197601|ENST00000354817|FAR1 32.116972079565 0.368454113111938 4 {[DA]|[EG]}VAG{I|L}NV{I|L} 9 -1 + 55.34 0.0 0.0 6.3574 6.3574 74.691 0.0 0.0 0.0 14.762523205337708 10.330145895351848 10.330145895351848 0.7255998297264199 0 0.6989700043360187 1.6989700043360187 0.4247425010840047 0.0 {[DA]|[EG]}VAG{I|L}NV{I|L};{[DA]|[EG]}VQ{I|L}NV{I|L};{[DA]|[EG]}VAG{I|L}GGV{I|L};{[DA]|[EG]}VQ{I|L}GGV{I|L};[Q{I|L}]DG{I|L}NV{I|L};{NN|[MP]|[D{I|L}]|[EV]}GAG{I|L}NV{I|L};{NN|[MP]|[D{I|L}]|[EV]}GQ{I|L}NV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EG{I|L}NV{I|L};[Q{I|L}]GD{I|L}NV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AD{I|L}NV{I|L} 6.3574;6.274;5.2996;5.21;4.6615;4.5906;4.5072;4.3928;4.2849;4.0162 -;-;-;-;-;-;-;-;-;- 614 1 1.14 92876.7 1.0 9434 4860 14279 HBL1_DMSO_200M_050219_2,14296 HBL1_DMSO_200M_050219_2,14296,QLNVTPLS False False DAVQLNVI 75.390174 436.24815672636 12487169.0 14279.0 ENST00000524933.1_1_11:13716477-13732426:+|nuORF;;ENSG00000197601|ENST00000354817|FAR1 3.0445431073506675 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14297 75.394 202.0 593790.0 25 0 66179.0 + 22136 LPPQPKVK 8 113 453.7924634572879 0 453.7922546267509 PEAK CID FTMS 0 0 0 14279 432239.90625 0.013327117861832 26 -2.474884033203125 18 Unmodified _LPPQPKVK_ REV__ENSG00000204463|ENST00000676615|BAG6;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-4|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6 32.116972079565 0.2111542247894177 4 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 6 -1 23.73 0.0 0.0 2.6204 0.0 0.0 113.08382863765765 66.03572260074452 179.11955123840215 0.0 0.0 0.0 0.0 0 1.0269763493273798 0.0 0.0 0.3494850021680094 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 2.6204 - 119 + 1 1.14 96906.2 1.0 9435 4860 14279 HBL1_DMSO_200M_050219_2,14297 HBL1_DMSO_200M_050219_2,14297,LPPQPKVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14298 75.398 220.0 447800.0 25 0 70346.0 + 12020 GPVLRRPTWL 10 115 597.8564034796636 1193.6982540261272 2 597.8568603396416 MULTI CID FTMS 0 0 0 14279 430048.78125 0.2900685023615558 6 -0.5069046020507812 19 Unmodified _GPVLRRPTWL_ REV__ENST00000587457.1_1_19:55741658-55741895:-|nuORF 3.944395688203298 0.708391353636983 4 {I|L}{I|L} 2 -1 10.969 0.0 0.0 0.91892 0.0 0.0 714.3868109145451 250.1198366754516 964.5066475899966 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 0.91892 - 56 + 1 1.14 77936.0 1.0 9436 4860 14279 HBL1_DMSO_200M_050219_2,14298 HBL1_DMSO_200M_050219_2,14298,GPVLRRPTWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14299 75.402 224.0 450530.0 25 0 63212.0 + 3736 DAFRVNVI 8 124 467.2616036647327 932.5086543962652 2 467.2618286013603 MULTI CID FTMS 0 0 0 14279 374350.9375 0.0202781623616148 6 -0.5069046020507812 20 Unmodified _DAFRVNVI_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000466598.5_1_3:183894781-183896942:+|nuORF;ENST00000472560.5_1_3:183894781-183898834:+|nuORF;ENST00000487958.5_1_3:183894781-183898060:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 41.8396318013385 0.2035142800366642 4 {[TV]|[{I|L}S]}[MT]RNV{I|L} 8 5 + 32.871 0.0 0.0 3.5251 3.5251 67.416 0.0 0.0 0.0 1.2147820449879276 0.9479823887022576 0.9479823887022576 2.703037561203842 0 0.75 0.6777807052660807 0.0 0.0 {[TV]|[{I|L}S]}[MT]RNV{I|L};{[DA]|[EG]}[RK][MT]V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP]RNV{I|L};{[TV]|[{I|L}S]}[MT]RGGV{I|L};{[DA]|[EG]}[RK]{I|L}{M(Oxidation (M))|F}[PS];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP]RGGV{I|L};[{I|L}P]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[MT]V{I|L};{[TV]|[{I|L}S]}[RN][MT]V{I|L};[{I|L}P][HN]S[PG]V{I|L};[{I|L}T][HD][HV]V{I|L} 3.5251;3.2352;2.6943;2.5318;2.0042;1.701;1.5175;1.4425;1.4005;1.0809 -;-;-;-;-;-;-;-;-;- 546 1 1.14 78427.2 1.0 9437 4860 14279 HBL1_DMSO_200M_050219_2,14299 HBL1_DMSO_200M_050219_2,14299,DAFRVNVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14301 75.407 91.0 728620.0 25 0 64195.0 + 42551 FVADGIFKA 9 100 484.2381936250125 966.461834316825 2 484.7401916384697 MULTI CID FTMS 0 0 0 14300 146608.453125 0.4650138211520719 1 -0.1397857666015625 1 Unmodified _VTPEEPPAGA_ nc|ENSG00000149273|P23396-2|RPS3;ENSG00000149273|ENST00000531188|RPS3;ENST00000529173.5_1_11:75110591-75112804:+|nuORF 26.88365393820708 0.3646707531412818 4 {[TV]|[{I|L}S]}N[HA]EPTV 9 7 {[TV]|[{I|L}S]}N[HA]E + + 19.399 4.0009 0.61432 2.0072 2.0072 44.606 0.0 0.0 0.0 0.0 7.180475292681269 0.0 0.0 0 0.0 0.0 0.5242275032520141 0.0 {[TV]|[{I|L}S]}N[HA]EPTV 2.0072 - 486 + 1 1.14 56091.5 1.0 9438 4861 14300 HBL1_DMSO_200M_050219_2,14301 HBL1_DMSO_200M_050219_2,14301,VTPEEPPAGA False False FVADGIFKA 75.406863 484.74019163847 6488178.5 14300.0 nc|ENSG00000149273|P23396-2|RPS3;;ENSG00000149273|ENST00000531188|RPS3;;ENST00000529173.5_1_11:75110591-75112804:+|nuORF 3.4606401125590005 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14302 75.412 274.0 705620.0 25 0 114110.0 -1 0 140 323.2097024817697 644.4048520303394 2 323.2093994021416 MULTI CID FTMS 0 0 0 14300 350493.28125 0.4588032516094829 -1 0.0437469482421875 2 4 {I|L}M{I|L}{I|L}R 5 -1 + 57.669 0.0 0.0 8.9492 8.9492 97.378 0.0 0.0 0.0 46.95554701812867 15.00508444608478 15.00508444608478 24.47621246364342 0 0.2742275032520141 1.5228787452803376 0.0 0.7302046884880937 {I|L}M{I|L}{I|L}R;{I|L}{I|L}M{I|L}R 8.9492;5.1509 -;- 39 + 1 1.14 155191.2 1.0 9439 4861 14300 HBL1_DMSO_200M_050219_2,14302 HBL1_DMSO_200M_050219_2,14302, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14303 75.413 38.0 1442300.0 25 0 162660.0 15526 IPVLANFIV 9 76 493.30756668585485 984.6005804385096 2 493.3083984255791 MULTI CID FTMS 0 0 0 14300 1219784.875 0.2040963804318035 -3 0.2401199340820312 3 Unmodified _IPVLANFIV_ ENSG00000146085|ENST00000274813|MMUT 21.74664581756881 0.2544899275067181 4 {I|L}P 2 7 43.711 0.0 0.0 4.4395 0.0 0.0 0.0 771.4414467459895 771.4414467459895 20.48959041370505 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.4395 + + 158 + 1 1.14 49728.4 1.0 9440 4861 14300 HBL1_DMSO_200M_050219_2,14303 HBL1_DMSO_200M_050219_2,14303,IPVLANFIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14304 75.417 176.0 1001500.0 25 0 120760.0 42058 VQVLLDLRW 9 109 571.338040303897 1140.6615276745938 2 571.3384887576103 MULTI CID FTMS 0 0 0 14300 390232.40625 0.6500277294509257 -1 0.0437469482421875 4 Unmodified _VQVLLDLRW_ ENST00000526808.5_1_8:70476378-70496789:+|nuORF 25.399314129420983 0.2080152500878129 4 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}[WE]{I|L}RV 9 3 + 57.708 0.0 0.0 5.0592 5.0592 76.272 0.0 0.0 0.0 9.643331241078172 14.09256854528806 9.643331241078172 4.648167490521168 0 0.4876954943324545 1.6989700043360187 0.0 0.4749073637206092 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}[WE]{I|L}RV;{[QV]|[N{I|L}]|[RA]|[KV]}V[WE]{I|L}{I|L}RV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V[WE]{I|L}RV;{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}{I|L}[WE]RV;{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}[WE]{I|L}VGV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[WD]{I|L}{I|L}RV;[{I|L}V]N{I|L}[WE]{I|L}RV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[W{I|L}]D{I|L}RV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V{I|L}[WE]RV;{[QV]|[N{I|L}]|[RA]|[KV]}V[WE]{I|L}{I|L}VGV 5.0592;4.6517;4.6409;4.4572;4.2905;4.2334;4.2138;4.1239;4.0389;3.883 -;-;-;-;-;-;-;-;-;- 819 1 1.14 133982.8 1.0 9441 4861 14300 HBL1_DMSO_200M_050219_2,14304 HBL1_DMSO_200M_050219_2,14304,VQVLLDLRW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14305 75.419 91.0 913400.0 25 0 88119.0 + 39940 VFYLEPVT 8 105 484.259993286822 0 484.2649719119072 PEAK CID FTMS 0 0 0 14300 407798.5 1.0 0 0.0 5 Unmodified _VFYLEPVT_ REV__ENST00000463504.5_1_3:31921019-32010971:-|nuORF 24.67388899826682 0.3296343502680589 4 GV 2 -1 10.969 0.0 0.0 1.1349 0.0 0.0 691.3415317781593 116.05108820133046 807.3926199794897 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GV 1.1349 - 122 + 1 1.14 68735.6 1.0 9442 4861 14300 HBL1_DMSO_200M_050219_2,14305 HBL1_DMSO_200M_050219_2,14305,VFYLEPVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14306 75.429 607.0 489140.0 25 0 44718.0 + 17154 KLIEKLDIKL 10 205 606.9001338174711 1211.785714701742 2 606.9004394412041 MULTI CID FTMS 0 0 0 14300 319605.25 1.0 0 0.0 6 Unmodified _KLIEKLDIKL_ ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF 110.111712463345 0.0026037387564926 4 [K{I|L}]{I|L}ED{I|L}K{I|L}K{I|L} 10 2 + 104.2 0.0 0.0 8.5991 8.5991 84.8 0.0 0.0 0.0 4.881536853120082 4.881536853120082 4.881536853120082 3.0102999566398125 0 2.4361818737241734 0.3467874862246563 1.1833245082789778 1.418544145249314 [K{I|L}]{I|L}ED{I|L}K{I|L}K{I|L};[K{I|L}]{I|L}EDK{I|L}{I|L}K{I|L};{I|L}K{I|L}EK{I|L}D{I|L}K{I|L};K{I|L}{I|L}EK{I|L}D{I|L}K{I|L};[K{I|L}]{I|L}DE{I|L}K{I|L}K{I|L};[K{I|L}]{I|L}EK{I|L}D{I|L}K{I|L};[K{I|L}]E{I|L}D{I|L}K{I|L}K{I|L};[K{I|L}]{I|L}DEK{I|L}{I|L}K{I|L};[K{I|L}]{I|L}EKD{I|L}{I|L}K{I|L};[K{I|L}]{I|L}EVEK{I|L}K{I|L} 8.5991;8.3507;8.1963;8.1963;8.1482;8.0006;7.9709;7.8997;7.8902;7.7702 -;-;-;+;-;+;-;-;-;- + 4490 1 1.14 211454.0 1.0 9443 4861 14300 HBL1_DMSO_200M_050219_2,14306 HBL1_DMSO_200M_050219_2,14306,KLIEKLDIKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14307 75.442 741.0 459480.0 25 0 21990.0 + 17840 KQLDDLKVEL 10 250 600.8453419844042 1199.6761310356085 2 600.8452636599541 MULTI CID FTMS 0 0 0 14300 219594.34375 0.0008171293345957 46 -4.678535461425781 7 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 109.14607045052348 0.0032173623903629 4 {I|L}{M(Oxidation (M))|F}VK{I|L}DD{I|L}Q 9 8 84.937 0.0 0.0 7.08 0.0 0.0 0.0 125.07242761783438 125.07242761783438 43.402895706096935 0.0 0.0 0.0 0 2.1791746928241125 0.4685210829577448 1.5189301784845295 1.6540820565447218 {I|L}{M(Oxidation (M))|F}VK{I|L}DD{I|L}Q 7.08 - 43416 + 1 1.14 240023.0 1.0 9444 4861 14300 HBL1_DMSO_200M_050219_2,14307 HBL1_DMSO_200M_050219_2,14307,KQLDDLKVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14308 75.445 135.0 493360.0 25 0 64911.0 + 10298 FSAEDIAKI 9 101 497.2664776521149 0 497.2668334841728 PEAK CID FTMS 0 0 0 14300 210198.78125 0.9561471696769496 1 -0.1397857666015625 8 Unmodified _FSAEDIAKI_ ENSG00000112118|ENST00000596288|MCM3;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;nc|ENSG00000112118|P25205-2|MCM3 31.26834338654808 0.1046433560557175 4 SAE 3 6 16.995 0.0 0.0 1.7123 0.0 0.0 147.068708622786 555.3153780572874 702.3840866800733 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + SAE 1.7123 + + 85 + 1 1.14 55809.1 1.0 9445 4861 14300 HBL1_DMSO_200M_050219_2,14308 HBL1_DMSO_200M_050219_2,14308,FSAEDIAKI True True FSAEDIAKI 75.44473 497.266833484173 1525347.5 14300.0 ENSG00000112118|ENST00000596288|MCM3;;ENST00000476448.1_1_6:52141011-52144220:-|nuORF;;nc|ENSG00000112118|P25205-2|MCM3 5.022633711496989 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14309 75.458 761.0 218960.0 25 0 17085.0 -1 ELRRCMCGNNM 11 194 736.7971164834183 1471.5796800336366 2 736.7985107302666 MULTI CID FTMS 0 0 0 14300 201436.65625 0.3532417823539263 -1 0.0437469482421875 9 2 Carbamidomethyl (C),2 Oxidation (M) _ELRRC(Carbamidomethyl (C))M(Oxidation (M))C(Carbamidomethyl (C))GNNM(Oxidation (M))_ ENST00000517297.5_1_8:54967680-55014407:-|nuORF;ENST00000519926.5_1_8:54966225-55014407:-|nuORF 5.731851221503515 0.8481046878870278 4 {[VA]|[{I|L}G]}VEQ 5 -1 37.305 0.0 0.0 2.535 0.0 0.0 0.0 942.279484070999 942.279484070999 0.3051391250888784 0.0 0.0 0.0 0 0.8252574989159953 2.0 0.2396518287104437 0.0 {[VA]|[{I|L}G]}VEQ 2.535 - 1682 1 1.14 117766.0 1.0 9446 4861 14300 HBL1_DMSO_200M_050219_2,14309 HBL1_DMSO_200M_050219_2,14309,ELRRCMCGNNM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14310 75.471 755.0 398380.0 25 0 30455.0 -1 0 165 927.4233779922006 1852.832203051201 2 927.4261352419852 MULTI CID FTMS 0 0 0 14300 182047.84375 0.9000079564265911 1 -0.1397857666015625 10 4 [QP]{I|L}{I|L}G{I|L}TSV 9 -1 47.26 0.0 0.0 2.5507 0.0 0.0 0.0 941.2744997643448 941.2744997643448 6.236451190823651 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.2302046884880935 0.5484550065040282 [QP]{I|L}{I|L}G{I|L}TSV 2.5507 - 5417 1 1.14 190616.1 1.0 9447 4861 14300 HBL1_DMSO_200M_050219_2,14310 HBL1_DMSO_200M_050219_2,14310, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14311 75.486 785.0 238250.0 25 0 35588.0 8057 ENRKLKRELP 10 180 641.8827479088961 1281.7509428845922 2 641.8824340701103 MULTI CID FTMS 0 0 0 14300 181491.375 0.4381269755030269 -1 0.0437469482421875 11 Unmodified _ENRKLKRELP_ ENSG00000073605|ENST00000418519|GSDMB;nc|ENSG00000073605|Q8TAX9-1|GSDMB;nc|ENSG00000073605|Q8TAX9-2|GSDMB;nc|ENSG00000073605|Q8TAX9-3|GSDMB;nc|ENSG00000073605|Q8TAX9-6|GSDMB 3.2813086475875832 0.7114585191678878 4 {I|L}Y 2 9 10.969 0.0 0.0 0.85579 0.0 0.0 280.1918741363484 722.3841646783811 1002.5760388147296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y 0.85579 - 550 + 1 1.14 144101.4 1.0 9448 4861 14300 HBL1_DMSO_200M_050219_2,14311 HBL1_DMSO_200M_050219_2,14311,ENRKLKRELP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14312 75.5 799.0 446840.0 25 0 81656.0 + 14620 IIIGGVATV 9 117 842.5350404582869 841.5277639916868 1 842.5368530154228 MULTI CID FTMS 0 0 0 14300 176116.3125 1.0 0 0.0 12 Unmodified _IIIGGVATV_ ENSG00000179918|ENST00000478753|SEPHS2 106.8454739257335 0.0073671968602159 4 {I|L}{I|L}NV{I|L}ATV 8 4 + 68.327 0.0 0.0 8.1194 8.1194 79.206 0.0 0.0 0.0 17.37334396171555 13.399480616943508 13.399480616943508 0.4845500650402812 0 1.1989700043360187 1.3979400086720375 0.3252574989159953 0.0 {I|L}{I|L}NV{I|L}ATV;{I|L}{I|L}NVA{I|L}TV;{I|L}{I|L}GGV{I|L}ATV;{I|L}{I|L}GGVA{I|L}TV;{I|L}{I|L}N{I|L}VATV;{I|L}{I|L}N{I|L}G{I|L}TV;{I|L}{I|L}NG{I|L}{I|L}TV;{I|L}{I|L}GG{I|L}VATV;{I|L}{I|L}GGG{I|L}{I|L}TV;{I|L}{I|L}GG{I|L}G{I|L}TV 8.1194;8.0618;7.885;7.8274;7.7617;7.7041;7.7041;7.5272;7.4697;7.4697 -;-;-;-;-;-;-;-;-;- 5074 1 1.14 241839.5 1.0 9449 4861 14300 HBL1_DMSO_200M_050219_2,14312 HBL1_DMSO_200M_050219_2,14312,IIIGGVATV True True IIIGGVATV 75.499613 842.536853015423 1138551.5 14300.0 ENSG00000179918|ENST00000478753|SEPHS2 4.767731825510661 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14313 75.513 800.0 149160.0 25 0 28395.0 -1 LECVYSQWCMY 11 138 777.8069012103231 1553.599249487446 2 778.3098632693291 MULTI CID FTMS 0 0 0 14300 155427.71875 0.0153378111705468 12 -1.1854324340820312 13 2 Carbamidomethyl (C),Oxidation (M) _LEC(Carbamidomethyl (C))VYSQWC(Carbamidomethyl (C))M(Oxidation (M))Y_ ENST00000371146.5_1_1:62916945-62917257:+|nuORF 1.3295316138638542 0.8688751186870782 4 [MT]G{[QS]|[NT]}TDYYYYY 12 -1 + 33.628 0.0 0.0 2.1645 2.1645 61.106 0.0 0.0 0.0 0.5912145211865578 2.4599895567132464 0.5912145211865578 0.5912145211865578 0 0.0 0.6989700043360187 0.3807196863200844 1.7302046884880935 [MT]G{[QS]|[NT]}TDYYYYY;[MT]G[C(Carbamidomethyl (C))R]DYYYYY;{[QN]|[E{I|L}]|[KN]}M[MT]DYYYYY;[YG]NV[DG]DYYYYY;[YG]GR[DG]DYYYYY;[YG]N[RD]DYYYYY;YY[DG]D[RN]YYYY;[YN]R[DG]DYYYYY;[YN]GV[DG]DYYYYY;[YG]GG[RD]DYYYYY 2.1645;2.1265;2.1265;2.0566;1.9625;1.8703;1.8584;1.844;1.8197;1.752 -;-;-;-;-;-;-;-;-;- 1319 1 1.14 84983.4 0.9900000095367432 9450 4861 14300 HBL1_DMSO_200M_050219_2,14313 HBL1_DMSO_200M_050219_2,14313,LECVYSQWCMY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14314 75.528 800.0 161480.0 25 0 9880.5 + -1 DQCEDMDFCQL 11 158 702.2502433798612 1402.4859338265223 2 702.2512084841728 MULTI CID FTMS 0 0 0 14300 145567.390625 0.8471883131952512 1 -0.1397857666015625 14 Carbamidomethyl (C) _DQC(Carbamidomethyl (C))EDMDFCQL_ REV__ENSG00000049323|ENST00000404816|LTBP1;REV__nc|ENSG00000049323|Q14766-2|LTBP1;REV__nc|ENSG00000049323|Q14766-3|LTBP1;REV__nc|ENSG00000049323|Q14766-4|LTBP1;REV__nc|ENSG00000049323|Q14766-5|LTBP1 8.745405648335112 0.8338865417133445 4 {I|L}SQ{I|L} 4 -1 37.027 0.0 0.0 2.6401 0.0 0.0 943.2163548243724 0.0 943.2163548243724 0.0 6.260489232024771 0.0 0.0 0 0.0 0.0 0.6549471895720984 1.305462187404089 {I|L}SQ{I|L} 2.6401 - 1139 + 1 1.14 95540.2 0.9900000095367432 9451 4861 14300 HBL1_DMSO_200M_050219_2,14314 HBL1_DMSO_200M_050219_2,14314,DQCEDMDFCQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14315 75.542 800.0 201040.0 25 0 38979.0 + 4685 DAYVLPKLYVK 11 174 654.8819054471516 1307.749257961103 2 655.3827392458916 MULTI CID FTMS 0 0 0 14300 86799.0859375 0.0277952664731118 9 -0.8473281860351562 15 Unmodified _DAYVLPKLYVK_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 6.630372943996041 0.8438654038452725 4 [WY]V{I|L} 4 8 24.45 0.0 0.0 1.8697 0.0 0.0 0.0 743.446702607202 743.446702607202 12.244237387763093 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 [WY]V{I|L} 1.8697 - 681 + 1 1.14 126380.6 0.9700000286102296 9452 4861 14300 HBL1_DMSO_200M_050219_2,14315 HBL1_DMSO_200M_050219_2,14315,DAYVLPKLYVK False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14317 75.547 19.0 2384800.0 25 0 150200.0 + 45838 YYPPSQIAQL 10 72 590.306293368628 1178.5980338040558 2 590.3063232302666 MULTI CID FTMS 0 0 0 14316 2434192.5 0.7959667558107273 2 -0.2213897705078125 1 Unmodified _YYPPSQIAQL_ ENSG00000070756|ENST00000318607|PABPC1;nc|ENSG00000070756|P11940-2|PABPC1 27.628801355627647 0.3479284626772844 4 YY{[WT]|[RM]}A 5 7 27.007 0.0 0.0 2.2915 0.0 0.0 0.0 491.2627657526001 491.2627657526001 0.6196092369567197 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 YY{[WT]|[RM]}A 2.2915 - 74 + 1 1.148 39652.0 1.0 9453 4862 14316 HBL1_DMSO_200M_050219_2,14317 HBL1_DMSO_200M_050219_2,14317,YYPPSQIAQL False True YYPPSQIAQL 75.546652 590.306323230267 76362376.0 14316.0 nc|ENSG00000070756|P11940-2|PABPC1;;ENSG00000070756|ENST00000318607|PABPC1 6.418355941772461 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14318 75.548 7.4 7548600.0 25 0 987270.0 + 16376 IYQEKVLDL 9 77 560.8163640232482 1119.6181751132965 2 560.8167602419853 MULTI CID FTMS 0 0 0 14316 8681967.0 0.8837138311613624 -1 0.1397857666015625 2 Unmodified _IYQEKVLDL_ ENSG00000079616|ENST00000160827|KIF22;nc|ENSG00000079616|Q14807-2|KIF22 72.96794272382148 0.0199516581995792 4 {I|L}Y[{M(Oxidation (M))|F}V]{I|L}VQGD 9 6 73.56 0.0 0.0 6.5701 0.0 0.0 0.0 82.06699548892811 82.06699548892811 49.80381264341851 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.7971062485323517 2.0 {I|L}Y[{M(Oxidation (M))|F}V]{I|L}VQGD 6.5701 - 919 + 1 1.148 48075.4 1.0 9454 4862 14316 HBL1_DMSO_200M_050219_2,14318 HBL1_DMSO_200M_050219_2,14318,IYQEKVLDL True True IYQEKVLDL 75.547831 560.816760241985 220119648.0 14316.0 ENSG00000079616|ENST00000160827|KIF22;;nc|ENSG00000079616|Q14807-2|KIF22 5.812318642934163 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14319 75.549 30.0 1459600.0 25 0 104050.0 + 29934 QSLEYLEQV 9 78 554.7798156059187 1107.5450782786372 2 554.7800170779228 MULTI CID FTMS 0 0 0 14316 1514236.5 0.7911778119734864 1 -0.0507278442382812 3 Unmodified _QSLEYLEQV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 71.92227651296345 0.0203558744033348 4 {NN|[MP]|[D{I|L}]|[EV]}TQY{I|L} 6 7 49.562 0.0 0.0 4.4749 0.0 0.0 0.0 371.1568696206873 371.1568696206873 25.15916793966632 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.75 0.8494850021680094 {NN|[MP]|[D{I|L}]|[EV]}TQY{I|L} 4.4749 - 612 1 1.148 39849.6 1.0 9455 4862 14316 HBL1_DMSO_200M_050219_2,14319 HBL1_DMSO_200M_050219_2,14319,QSLEYLEQV True True QSLEYLEQV 75.54901 554.780017077923 15562812.0 14316.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 5.783379395802816 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14320 75.55 51.0 1038900.0 25 0 236940.0 + 17423 KMYEEFLSKV 10 71 637.3284440033834 1272.6423350735668 2 637.3286620974541 MULTI CID FTMS 0 0 0 14316 1222024.125 0.634337978283567 -2 0.18353271484375 4 Unmodified _KMYEEFLSKV_ ENSG00000108946|ENST00000589228|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;nc|ENSG00000108946|P10644-2|PRKAR1A 41.25942665367479 0.1442678035400034 4 KMYEE{M(Oxidation (M))|F}{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]} 10 0 + 75.699 0.0 0.0 5.9482 5.9482 89.794 0.0 0.0 0.0 32.562893943202624 5.764837301042718 5.764837301042718 27.24546265559709 0 2.9604093769761874 0.0 0.0 0.0 + + KMYEE{M(Oxidation (M))|F}{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]};V[WH]EE{M(Oxidation (M))|F}{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]} 5.9482;3.8073 +;- + 359 + 1 1.148 48589.5 1.0 9456 4862 14316 HBL1_DMSO_200M_050219_2,14320 HBL1_DMSO_200M_050219_2,14320,KMYEEFLSKV False True KMYEEFLSKV 75.550364 637.328662097454 37404631.5 14316.0 ENSG00000188191|ENST00000537384|PRKAR1B;;ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 7.434091726938884 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14321 75.552 52.0 1168800.0 25 0 101250.0 3518 CSFTVTCLEV 10 87 551.2514752438167 1100.4883975544333 2 551.2517578005791 MULTI CID FTMS 0 0 0 14316 1014289.8125 0.9705718009243276 1 -0.0507278442382812 5 Unmodified _CSFTVTCLEV_ nc|ENSG00000124275|Q9UBK8-1|MTRR 14.838274106304384 0.5985701837916485 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ES]|[DT]|[{I|L}C]}{I|L}V 6 5 32.259 0.0 0.0 2.9314 0.0 0.0 0.0 435.1363217089833 435.1363217089833 19.160298737933687 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.113982988912431 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ES]|[DT]|[{I|L}C]}{I|L}V 2.9314 - 192 1 1.148 51597.1 1.0 9457 4862 14316 HBL1_DMSO_200M_050219_2,14321 HBL1_DMSO_200M_050219_2,14321,CSFTVTCLEV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 14322 75.553 30.0 1799300.0 25 0 216910.0 + 25664 NGISDLVKV 9 91 472.28775725673984 942.5609615802796 2 472.2879211306572 MULTI CID FTMS 0 0 0 14316 986688.9375 0.2196494490614928 4 -0.3233718872070312 6 Unmodified _NGATRKLAL_ nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-3|LDHA;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;ENSG00000134333|ENST00000422447|LDHA;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 11.640296217721598 0.521594087909532 4 {I|L} 1 8 13.979 0.0 0.0 1.4831 0.0 0.0 811.466004160161 0.0 811.466004160161 0.0 1.6722687557546578 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4831 + + 50 + 1 1.148 47943.7 1.0 9458 4862 14316 HBL1_DMSO_200M_050219_2,14322 HBL1_DMSO_200M_050219_2,14322,NGATRKLAL False False NGISDLVKV 75.55291 472.287921130657 2150066.25 14316.0 nc|ENSG00000134333|P00338-4|LDHA;;nc|ENSG00000134333|P00338-3|LDHA;;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;;ENSG00000134333|ENST00000422447|LDHA;;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 1.969336767991384 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14323 75.554 29.0 1255200.0 25 0 71650.0 + 15581 IPYPLPPNY 9 70 537.2892171800312 1072.5638814268625 2 537.2875854372978 MULTI CID FTMS 0 0 0 14316 844827.375 1.0 0 0.0 7 Unmodified _IPYPLPPNY_ ENSG00000134802|ENST00000395124|SLC43A3;ENST00000528098.5_1_11:57182763-57193651:-|nuORF;nc|ENSG00000134802|Q8NBI5-2|SLC43A3 41.8396318013385 0.0653578398400075 4 EV 2 9 29.83 0.0 0.0 2.7812 0.0 0.0 0.0 841.4441012018186 841.4441012018186 4.332854230089147 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 EV 2.7812 - 99 + 1 1.148 39683.0 1.0 9459 4862 14316 HBL1_DMSO_200M_050219_2,14323 HBL1_DMSO_200M_050219_2,14323,IPYPLPPNY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14324 75.555 49.0 1264300.0 25 0 108030.0 + 22956 LSFDARQVL 9 80 524.7934283657584 1047.5723037983166 2 524.7943603396416 MULTI CID FTMS 0 0 0 14316 912090.1875 0.8043865488912502 2 -0.2213897705078125 8 Unmodified _LSFDARQVL_ REV__ENST00000263174.8_1_1:100111748-100111862:+|nuORF 24.020572477871973 0.2255576514309169 4 [AG]A[KQ]S{M(Oxidation (M))|F}QV{I|L} 10 -1 + 51.488 0.0 0.0 4.915 4.915 79.004 0.0 0.0 0.0 3.925449767853309 34.966299270632035 3.925449767853309 7.7815125038364386 0 0.8807196863200843 1.3010299956639813 0.3807196863200844 0.0 [AG]A[KQ]S{M(Oxidation (M))|F}QV{I|L};[QA][KQ]S{M(Oxidation (M))|F}QV{I|L};{[QN]|[E{I|L}]|[KN]}VNS{M(Oxidation (M))|F}QV{I|L};[AG]A[KQ]S{M(Oxidation (M))|F}[AG]V{I|L};[QA][KQ]S{M(Oxidation (M))|F}[AG]V{I|L};{[QN]|[E{I|L}]|[KN]}VNS{M(Oxidation (M))|F}[AG]V{I|L} 4.915;4.1722;4.1134;4.0402;3.2932;3.2344 -;-;-;-;-;- 110 1 1.148 59796.4 1.0 9460 4862 14316 HBL1_DMSO_200M_050219_2,14324 HBL1_DMSO_200M_050219_2,14324,LSFDARQVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14325 75.557 75.0 760090.0 25 0 149260.0 + 24334 MEIKLIFIKM 10 72 633.3688785604222 1264.7232041876443 2 633.3694946169853 MULTI CID FTMS 0 0 0 14316 891976.4375 0.983295726147111 -1 0.1397857666015625 9 Unmodified _MEIKLIFIKM_ REV__ENST00000369093.6_1_10:121335031-121335091:-|nuORF 6.723162845929126 0.6955379296933136 4 {[QN]|[E{I|L}]|[KN]}M 3 -1 20.356 0.0 0.0 1.6095 0.0 0.0 0.0 888.5322306371162 888.5322306371162 19.386894765464685 0.0 0.0 0.0 0 0.0 0.958607314841775 0.3807196863200844 0.0 {[QN]|[E{I|L}]|[KN]}M 1.6095 - 16 1 1.148 48303.0 1.0 9461 4862 14316 HBL1_DMSO_200M_050219_2,14325 HBL1_DMSO_200M_050219_2,14325,MEIKLIFIKM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14326 75.558 45.0 817320.0 25 0 73390.0 + -1 ASVTFCLACY 10 74 567.7512274827026 1133.487902032205 2 567.7516357302666 MULTI CID FTMS 0 0 0 14316 876292.875 0.9090722593444588 -1 0.1397857666015625 10 Carbamidomethyl (C) _ASVTFC(Carbamidomethyl (C))LACY_ REV__ENSG00000169692|ENST00000371696|AGPAT2;REV__ENST00000470861.1_1_9:139571827-139581809:-|nuORF;REV__nc|ENSG00000169692|O15120-2|AGPAT2 6.2057823575117 0.6979311171683138 4 {M(Oxidation (M))|F}GESA{[YC]|[HE]} 7 -1 24.997 0.0 0.0 2.2054 0.0 0.0 358.1996327130875 0.0 358.1996327130875 0.0 4.028354154342679 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}GESA{[YC]|[HE]} 2.2054 - 48 1 1.148 33488.1 1.0 9462 4862 14316 HBL1_DMSO_200M_050219_2,14326 HBL1_DMSO_200M_050219_2,14326,ASVTFCLACY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14327 75.56 46.0 1679100.0 25 0 147800.0 + 9341 FILKKLDSI 9 97 538.8393988703225 1075.664244807445 2 538.8394042849541 MULTI CID FTMS 0 0 0 14316 829297.0 1.0 0 0.0 11 Unmodified _FILKKLDSI_ ENSG00000175768|ENST00000321301|TOMM5;ENST00000354833.7_1_5:70213930-70214023:+|nuORF;nc|ENSG00000175768|Q8N4H5-3|TOMM5 43.77239144664712 0.0547478964384323 4 {I|L}[WR]K{I|L}{I|L}E 7 6 38.984 0.0 0.0 3.6242 0.0 0.0 119.0739765851578 0.0 119.0739765851578 0.0 16.25442771474777 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}[WR]K{I|L}{I|L}E 3.6242 - 382 1 1.148 64885.1 1.0 9463 4862 14316 HBL1_DMSO_200M_050219_2,14327 HBL1_DMSO_200M_050219_2,14327,FILKKLDSI True True FILKKLDSI 75.559679 538.839404284954 11634673.0 14316.0 nc|ENSG00000175768|Q8N4H5-3|TOMM5;;ENST00000354833.7_1_5:70213930-70214023:+|nuORF;;ENSG00000175768|ENST00000321301|TOMM5 1.0437229871749878 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14328 75.561 78.0 1066600.0 25 0 200560.0 + 9629 FLLYLVVPI 9 104 359.56219766747114 1075.6647636026134 3 359.5618774294853 MULTI CID FTMS 0 0 0 14316 703438.8125 0.835070135002135 -1 0.1397857666015625 12 Unmodified _FLLYLVVPI_ REV__ENSG00000130714|ENST00000402686|POMT1;REV__ENST00000462375.5_1_9:134385592-134386855:+|nuORF;REV__nc|ENSG00000130714|Q9Y6A1-3|POMT1;REV__nc|ENSG00000130714|Q9Y6A1-4|POMT1;REV__nc|ENSG00000130714|Q9Y6A1|POMT1 28.17323086031832 0.1727213568982648 4 {M(Oxidation (M))|F}{I|L}{I|L}K 4 -1 36.714 0.0 0.0 3.4132 0.0 0.0 0.0 571.3100679986936 571.3100679986936 21.37463476178468 0.0 0.0 0.0 0 0.3807196863200844 1.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}{I|L}K 3.4132 - 251 + 1 1.148 68562.2 1.0 9464 4862 14316 HBL1_DMSO_200M_050219_2,14328 HBL1_DMSO_200M_050219_2,14328,FLLYLVVPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14329 75.563 25.0 2088100.0 25 0 183240.0 + 21970 LPPNLYPTV 9 85 507.2872214241527 1012.5598899151054 2 507.2870056033134 MULTI CID FTMS 0 0 0 14316 595553.0625 0.7817469009795085 1 -0.0507278442382812 13 Unmodified _LPPNLYPTV_ ENSG00000010017|ENST00000011619|RANBP9;nc|ENSG00000010017|Q96S59-3|RANBP9 42.09456458481378 0.0639583784996157 4 [{I|L}P]NPY{I|L}S[{I|L}P] 9 5 + 36.648 0.0 0.0 3.6193 3.6193 71.426 0.0 0.0 0.0 11.954873154752091 0.5023491188713862 0.5023491188713862 4.77121254719663 0 0.5 1.3979400086720375 0.0 0.0 [{I|L}P]NPY{I|L}S[{I|L}P];[{I|L}P]NP{I|L}YS[{I|L}P];[{I|L}P]GGPY{I|L}S[{I|L}P];[{I|L}P]GGP{I|L}YS[{I|L}P];{[VA]|[{I|L}G]}[PG]PY{I|L}S[{I|L}P];[{I|L}P]S{[RE]|[WV]}{I|L}{I|L}{[DA]|[EG]};[{I|L}P]S{[WT]|[RM]}{I|L}S[{I|L}P];[TP]V{[RE]|[WV]}{I|L}{I|L}{[DA]|[EG]};[TP]V{[WT]|[RM]}{I|L}S[{I|L}P];{[VA]|[{I|L}G]}[PG]P{I|L}YS[{I|L}P] 3.6193;3.1481;2.7099;2.2387;2.1726;2.0422;1.9414;1.8683;1.7675;1.7014 -;-;-;-;-;-;-;-;-;- 220 1 1.148 45636.2 1.0 9465 4862 14316 HBL1_DMSO_200M_050219_2,14329 HBL1_DMSO_200M_050219_2,14329,LPPNLYPTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14330 75.565 85.0 1009900.0 25 0 76713.0 + -1 DLREQILRV 9 106 381.2281560766058 380.22087961000585 1 381.2277099490166 MULTI CID FTMS 0 0 0 14316 628643.0625 0.9726948288123696 -1 0.1397857666015625 14 nc|ENSG00000254893|A6NIZ1|RAP1BL;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000127314|P61224-4|RAP1B;ENSG00000127314|ENST00000250559|RAP1B;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;ENSG00000116473|ENST00000369709|RAP1A 4 {M(Oxidation (M))|F} 1 -1 10.596 0.0 0.0 2.7868 0.0 0.0 215.1414098607856 0.0 215.1414098607856 0.0 0.3536570060759025 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.7868 - 26 + 1 1.148 72868.3 1.0 9466 4862 14316 HBL1_DMSO_200M_050219_2,14330 HBL1_DMSO_200M_050219_2,14330, False False DLREQILRV 75.564529 381.227709949017 9993451.0 14316.0 nc|ENSG00000254893|A6NIZ1|RAP1BL;;nc|ENSG00000127314|P61224-3|RAP1B;;nc|ENSG00000127314|P61224-4|RAP1B;;ENSG00000127314|ENST00000250559|RAP1B;;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;;ENSG00000116473|ENST00000369709|RAP1A 5.042378107706706 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14331 75.568 199.0 660370.0 25 0 50056.0 + 28579 PTSVPQIAV 9 126 456.26355474428544 910.5125565553708 2 456.2632629275322 MULTI CID FTMS 0 0 0 14316 450383.6875 0.9408038103516582 -2 0.18353271484375 15 Unmodified _PTSVPQIAV_ ENSG00000099308|ENST00000687212|MAST3;nc|ENSG00000099308|O60307|MAST3 46.020951573049366 0.0490941689151868 4 {[VA]|[{I|L}G]}DVPQ 6 6 47.554 0.0 0.0 5.2228 0.0 0.0 0.0 298.1764108857022 298.1764108857022 25.598943791441968 0.0 0.0 0.0 0 0.3252574989159953 2.0 1.4916440611282624 0.0 {[VA]|[{I|L}G]}DVPQ 5.2228 - 442 1 1.148 100189.1 1.0 9467 4862 14316 HBL1_DMSO_200M_050219_2,14331 HBL1_DMSO_200M_050219_2,14331,PTSVPQIAV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14332 75.577 470.0 474870.0 25 0 56618.0 + 18260 KVIEAIRVEL 10 155 585.3665312663941 1168.718509599588 2 585.3664428591728 MULTI CID FTMS 0 0 0 14316 444273.75 0.2372978019012453 2 -0.2213897705078125 16 Unmodified _KVIEAIRVEL_ ENSG00000198901|ENST00000394249|PRC1;nc|ENSG00000198901|O43663-2|PRC1;nc|ENSG00000198901|O43663-3|PRC1;nc|ENSG00000198901|O43663-4|PRC1 55.83852870615439 0.0475024613523468 4 KV{I|L}EA{I|L} 6 4 76.164 0.0 0.0 6.5169 0.0 0.0 0.0 512.2834977814255 512.2834977814255 21.77362719830313 0.0 0.0 0.0 0 1.7302046884880935 1.0457574905606752 0.4247425010840047 0.0 + KV{I|L}EA{I|L} 6.5169 + + 3743 + 1 1.148 166092.4 1.0 9468 4862 14316 HBL1_DMSO_200M_050219_2,14332 HBL1_DMSO_200M_050219_2,14332,KVIEAIRVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14333 75.578 28.0 1651700.0 25 0 130510.0 + 29778 QPYMPIPHV 9 94 541.2779341848146 1080.5413154364292 2 541.2783080935478 MULTI CID FTMS 0 0 0 14316 334459.75 0.4415534286599526 -2 0.18353271484375 17 Unmodified _QPYMPIPHV_ ENSG00000174106|ENST00000308330|LEMD3 5.230669730166228 0.7320841359114558 4 M 1 8 15.485 0.0 0.0 1.433 0.0 0.0 931.4900897057636 0.0 931.4900897057636 0.0 5.30726239543597 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 1.433 + + 45 + 1 1.148 43785.0 1.0 9469 4862 14316 HBL1_DMSO_200M_050219_2,14333 HBL1_DMSO_200M_050219_2,14333,QPYMPIPHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14334 75.58 84.0 636960.0 25 0 73172.0 9416 FKLHELTSL 9 81 544.3100605502706 1086.605568167341 2 544.3104125857353 MULTI CID FTMS 0 0 0 14316 443174.78125 0.6998939616892061 1 -0.0507278442382812 18 Unmodified _FKLHELTSL_ ENSG00000124429|ENST00000262753|POF1B;nc|ENSG00000124429|Q8WVV4-1|POF1B 6.723162845929126 0.6799819581413107 4 {I|L} 1 8 10.837 0.0 0.0 0.99737 0.0 0.0 955.5106260060114 0.0 955.5106260060114 0.0 0.2415233978727737 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.99737 + + 37 + 1 1.148 46431.6 1.0 9470 4862 14316 HBL1_DMSO_200M_050219_2,14334 HBL1_DMSO_200M_050219_2,14334,FKLHELTSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14335 75.589 513.0 576970.0 25 0 69091.0 12662 GVLGWILIAV 10 219 520.8265615949967 1039.6385702567934 2 520.8271362185478 MULTI CID FTMS 0 0 0 14316 411169.71875 0.3478927648607506 2 -0.2213897705078125 19 Unmodified _GVLGWILIAV_ chr6:116462520-116463283|48|16.48|0.7|4.56|+|ENST00000368604|CALHM6,CALHM6 18.13498045792455 0.5432546531930572 4 [{I|L}V]REQ{I|L}{I|L}G{I|L} 9 6 + 35.868 0.0 0.0 3.4501 3.4501 74.117 0.0 0.0 0.0 2.849394356153468 14.315597688630085 2.849394356153468 8.002448227465255 0 0.7742275032520141 0.9208187539523752 0.0 0.0 [{I|L}V]REQ{I|L}{I|L}G{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]Q{I|L}{I|L}G{I|L};[{I|L}V]RE[AG]{I|L}{I|L}G{I|L};{I|L}{I|L}[RD]Q{I|L}{I|L}G{I|L};[Q{I|L}][KQ]Q{I|L}{I|L}G{I|L};[{I|L}V]REQ{I|L}G{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}][AG]{I|L}{I|L}G{I|L};[AG]{I|L}[KQ]Q{I|L}{I|L}G{I|L};{I|L}{I|L}[RD][AG]{I|L}{I|L}G{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]Q{I|L}G{I|L}{I|L} 3.4501;2.6803;2.5643;2.1896;1.9995;1.9569;1.7946;1.7231;1.3038;1.1871 -;-;-;-;-;-;-;-;-;- 1867 1 1.148 230260.5 1.0 9471 4862 14316 HBL1_DMSO_200M_050219_2,14335 HBL1_DMSO_200M_050219_2,14335,GVLGWILIAV False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 14336 75.593 225.0 323410.0 25 0 24072.0 + 4872 DGATILKL 8 118 415.7527288341325 829.490904735065 2 415.7529785037041 MULTI CID FTMS 0 0 0 14316 365418.8125 0.3838136073772656 2 -0.2213897705078125 20 Unmodified _DGATILKL_ ENSG00000120438|ENST00000321394|TCP1;ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;nc|ENSG00000135624|Q99832-3|CCT7 52.268347100219714 0.1285778651304833 4 AT{I|L}{I|L}K{I|L} 6 2 44.557 0.0 0.0 5.3716 0.0 0.0 172.05384526416498 0.0 172.05384526416498 0.0 28.079051317897665 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.3054621874040891 + AT{I|L}{I|L}K{I|L} 5.3716 + + 155 + 1 1.148 62465.4 1.0 9472 4862 14316 HBL1_DMSO_200M_050219_2,14336 HBL1_DMSO_200M_050219_2,14336,DGATILKL False True DGATILKL 75.593016 415.752978503704 13380054.0 14316.0 ENST00000461290.5_1_2:73461506-73471178:+|nuORF;;nc|ENSG00000135624|Q99832-3|CCT7;;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;;ENSG00000135624|ENST00000258091|CCT7;;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;;ENSG00000120438|ENST00000321394|TCP1 5.375650087992351 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14338 75.599 176.0 725190.0 25 0 57429.0 + 32269 RWPDYVREL 9 114 411.88402130637087 1232.6302345193126 3 411.8841430544853 MULTI CID FTMS 0 0 0 14337 365573.1875 0.3168089963541761 -11 1.0015106201171875 1 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 66.45667989310934 0.0225072657982126 4 [WR]PDY 5 4 41.923 0.0 0.0 3.4011 0.0 0.0 0.0 512.2850015700282 512.2850015700282 26.702799885623328 0.0 0.0 0.0 0 1.1677353201839438 1.6989700043360187 0.2614393726401688 0.6549471895720985 + [WR]PDY 3.4011 + + 439 1 1.148 103260.6 1.0 9473 4863 14337 HBL1_DMSO_200M_050219_2,14338 HBL1_DMSO_200M_050219_2,14338,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14339 75.611 697.0 314310.0 25 0 40578.0 + 6016 DSALLPAV 8 184 393.2234758749538 784.4323988167076 2 393.2236205935478 MULTI CID FTMS 0 0 0 14337 297629.09375 0.4811546967862804 3 -0.27264404296875 2 Unmodified _DSALLPAV_ ENSG00000269404|ENST00000595883|SPIB;nc|ENSG00000269404|Q01892-3|SPIB 90.83580072412532 0.0563165270037559 4 {[DS]|[MA]|[CV]|TT}A{I|L}{I|L}PAV 8 0 + 45.924 0.0 0.0 5.8544 5.8544 83.754 0.0 0.0 0.0 8.822945126149968 9.731975075880328 8.822945126149968 8.822945126149968 0 1.329689690656103 0.0 1.2783773187068794 0.0 + + {[DS]|[MA]|[CV]|TT}A{I|L}{I|L}PAV;[PA]{I|L}{[MS]|[{M(Oxidation (M))|F}A]}PAV;[{I|L}A]SD{I|L}PAV;{[DS]|[MA]|[CV]|TT}A{I|L}P{I|L}AV;{I|L}{I|L}D{[SA]|[TG]}PAV;{[ET]|[MV]}[VG]{I|L}PAV;[PA]D{[TV]|[{I|L}S]}{I|L}AV;[{I|L}P]A{[MS]|[{M(Oxidation (M))|F}A]}PAV;[{I|L}A]SDP{I|L}AV;[{I|L}A]T[DV]PAV 5.8544;4.7296;4.4644;3.8104;3.4105;2.6823;2.6003;2.4628;2.4203;2.3101 +;-;-;-;-;-;-;-;-;- + 241 1 1.148 170032.1 1.0 9474 4863 14337 HBL1_DMSO_200M_050219_2,14339 HBL1_DMSO_200M_050219_2,14339,DSALLPAV True True DSALLPAV 75.61067 393.223620593548 4223730.5 14337.0 ENSG00000269404|ENST00000595883|SPIB;;nc|ENSG00000269404|Q01892-3|SPIB 5.830224355061849 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14340 75.612 11.0 5298100.0 25 0 405670.0 38109 TPLLLVTQV 9 82 492.310984543167 982.607416153134 2 492.3110229372978 MULTI CID FTMS 0 0 0 14337 3850766.0 0.269592462882052 -1 0.0507278442382812 3 Unmodified _TPLLLVTQV_ ENST00000492880.1_1_3:149213287-149213530:+|nuORF 26.88365393820708 0.1891292719743517 4 [{I|L}P]T{I|L}K{I|L}EAV 9 6 + 66.916 0.0 0.0 6.8101 6.8101 87.145 0.0 0.0 0.0 8.448134183737821 16.478174818886373 8.448134183737821 8.448134183737821 0 0.5 1.6989700043360187 0.7302046884880937 0.0 [{I|L}P]T{I|L}K{I|L}EAV;[TP]{I|L}{I|L}K{I|L}EAV;[{I|L}P]TE{I|L}[K{I|L}]AV;[{I|L}P]T{I|L}E[K{I|L}]AV;[TP]{I|L}E{I|L}[K{I|L}]AV;[TP]{I|L}{I|L}E[K{I|L}]AV;{[QN]|[E{I|L}]|[KN]}[TP]{I|L}[K{I|L}]AV;{[QN]|[E{I|L}]|[KN]}[TP]{I|L}RRV 6.8101;5.9503;5.1271;4.4157;4.2673;3.556;1.7468;0.5787 -;-;-;-;-;-;-;- 341 1 1.148 48211.9 1.0 9475 4863 14337 HBL1_DMSO_200M_050219_2,14340 HBL1_DMSO_200M_050219_2,14340,TPLLLVTQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14341 75.613 30.0 1511600.0 25 0 102090.0 + 18436 KYAVQLVEM 9 83 540.7899299640214 0 540.7897827029228 PEAK CID FTMS 0 0 0 14337 663005.875 1.0 0 0.0 4 Unmodified _KYAVQLVEM_ ENSG00000102910|ENST00000285737|LONP2 20.453626601364224 0.1969592619112565 4 E 1 8 11.594 0.0 0.0 1.0739 0.0 0.0 801.4714482075366 146.02852808170158 947.499976289238 0.0 0.0 0.0 0.0 0 0.5 0.0 0.5 0.0 + E 1.0739 + + 25 + 1 1.148 42397.3 1.0 9476 4863 14337 HBL1_DMSO_200M_050219_2,14341 HBL1_DMSO_200M_050219_2,14341,KYAVQLVEM False True KYAVQLVEM 75.613026 540.789782702923 2548488.0 14337.0 ENSG00000102910|ENST00000285737|LONP2 2.715058247248332 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14342 75.622 511.0 431680.0 25 0 27857.0 + 24893 MPNPSLAQVKI 11 196 599.336568604051 1196.6585842749018 2 599.3377563357353 MULTI CID FTMS 0 0 0 14337 362916.625 0.60271550005221 -1 0.0507278442382812 5 Unmodified _MPNPSLAQVKI_ ENSG00000152240|ENST00000282058|HAUS1;nc|ENSG00000152240|Q96CS2-2|HAUS1 128.86945502625275 0.0503664432907914 4 MPNPS{I|L}AQVK{I|L} 11 0 + 117.7 0.0 0.0 9.8354 9.8354 83.202 0.0 0.0 0.0 33.565473235138114 1.6840443038938986 1.6840443038938986 1.6840443038938986 0 2.584121882396211 1.6989700043360187 0.5866968715561641 1.513632853717045 + + MPNPS{I|L}AQVK{I|L};MPNPS{I|L}AQV{I|L}K;MPNPS{I|L}A[AG]VK{I|L};MPGGPS{I|L}AQVK{I|L};MPGGPS{I|L}AQV{I|L}K;MPNPS{I|L}A[AG]V{I|L}K;MPGGPS{I|L}A[AG]VK{I|L};MPGGPS{I|L}A[AG]V{I|L}K;MPN{I|L}[PS]AQVK{I|L};MPN{I|L}[PS]AQV{I|L}K 9.8354;9.6947;9.0726;9.0726;8.9319;8.9319;8.3123;8.1716;8.1177;7.9769 +;-;-;-;-;-;-;-;-;- + 4421 + 1 1.148 164712.9 1.0 9477 4863 14337 HBL1_DMSO_200M_050219_2,14342 HBL1_DMSO_200M_050219_2,14342,MPNPSLAQVKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14343 75.626 191.0 623150.0 25 0 97506.0 + 9661 FLPRKFPSL 9 94 368.8907417095448 1103.6503957288344 3 368.8903686404228 MULTI CID FTMS 0 0 0 14337 354704.6875 0.5364992280930092 -1 0.0507278442382812 6 Unmodified _FLPRKFPSL_ ENSG00000261236|ENST00000569669|BOP1;nc|ENSG00000261236|Q14137-2|BOP1 33.4449034751529 0.1114409586740657 4 [RP]K{M(Oxidation (M))|F}PS{I|L}{I|L}{M(Oxidation (M))|F} 9 4 + 41.609 0.0 0.0 3.7701 3.7701 70.499 0.0 0.0 0.0 3.556518697048716 12.158584579332512 3.556518697048716 3.93507816931929 0 0.0 0.0 0.3807196863200844 0.0 [RP]K{M(Oxidation (M))|F}PS{I|L}{I|L}{M(Oxidation (M))|F};[RP]K{M(Oxidation (M))|F}SP{I|L}{I|L}{M(Oxidation (M))|F};[RP]K{I|L}MS{I|L}{I|L}{M(Oxidation (M))|F};[VG][KA][RN]S{I|L}{I|L}{M(Oxidation (M))|F};[RP]K{M(Oxidation (M))|F}{I|L}[PS]{I|L}{M(Oxidation (M))|F};[RP]K{I|L}{M(Oxidation (M))|F}[PS]{I|L}{M(Oxidation (M))|F} 3.7701;3.4136;3.1368;1.551;1.4534;0.82012 -;-;-;-;-;- 263 1 1.148 102014.5 1.0 9478 4863 14337 HBL1_DMSO_200M_050219_2,14343 HBL1_DMSO_200M_050219_2,14343,FLPRKFPSL True True FLPRKFPSL 75.625695 368.890368640423 5489811.0 14337.0 nc|ENSG00000261236|Q14137-2|BOP1;;ENSG00000261236|ENST00000569669|BOP1 0.0726665755112965 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14344 75.636 578.0 249790.0 25 0 18372.0 + 5571 GPGGTSDAYAVIQV 14 153 667.8330115674983 1333.6514702017964 2 667.8335449099541 MULTI CID FTMS 0 0 0 14337 292405.0 0.7923072454804763 -1 0.0507278442382812 7 Unmodified _DMWFIWPLQV_ ENST00000522727.5_1_8:37735063-37756959:-|nuORF;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1 32.30548876998284 0.2428506522065767 4 {[QV]|[N{I|L}]|[RA]|[KV]}[DN]DAYAV{I|L}QV 12 8 + 73.49 0.0 0.0 5.5104 5.5104 81.67 0.0 0.0 0.0 7.350741281852919 38.07489445741142 7.350741281852919 7.862839004696809 0 1.0924778212679485 0.5686362358410126 2.4604093769761874 0.1462566630072955 {[QV]|[N{I|L}]|[RA]|[KV]}[DN]DAYAV{I|L}QV;{[VA]|[{I|L}G]}G[DN]DAYAV{I|L}QV;{[QS]|[NT]}PGSDAYAV{I|L}QV;[NP]TGSDAYAV{I|L}QV;{[CP]|[EA]}QQDAYAV{I|L}QV;[PA][SG]GSDAYAV{I|L}QV;[PA][NS]SDAYAV{I|L}QV;{[QS]|[NT]}PE[NS]YAV{I|L}QV;[NP]TE[NS]YAV{I|L}QV;[EP]{[ET]|[MV]}DAYAV{I|L}QV 5.5104;4.9209;4.8633;4.829;4.1804;4.051;4.0322;3.9437;3.9094;3.8166 -;-;-;-;-;-;-;-;-;- 5570 1 1.148 114552.0 1.0 9479 4863 14337 HBL1_DMSO_200M_050219_2,14344 HBL1_DMSO_200M_050219_2,14344,DMWFIWPLQV False False GPGGTSDAYAVIQV 75.635833 667.833544909954 3113778.0 14337.0 ENST00000522727.5_1_8:37735063-37756959:-|nuORF;;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;;ENSG00000156675|ENST00000330843|RAB11FIP1;;nc|ENSG00000156675|Q6WKZ4-5|RAB11FIP1 6.332213560740153 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14345 75.649 787.0 353540.0 25 0 43883.0 + 17425 KMYEEFLSKV 10 196 425.22116149593046 1272.6416550879917 3 425.2216064333916 MULTI CID FTMS 0 0 0 14337 269370.1875 0.9018689422907608 -1 0.0507278442382812 8 Unmodified _KMYEEFLSKV_ ENSG00000108946|ENST00000589228|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;nc|ENSG00000108946|P10644-2|PRKAR1A 53.7980654928069 0.0578593193895906 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KEE{M(Oxidation (M))|F}{I|L}SKV 10 2 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KE + + 50.884 24.882 4.5139 3.9983 3.9983 48.642 0.0 0.0 0.0 0.0 23.15854003206092 0.0 0.0 0 1.424742501084005 0.0 0.7783773187068795 0.2396518287104437 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KEE{M(Oxidation (M))|F}{I|L}SKV 3.9983 - 1495 + 1 1.148 233876.6 1.0 9480 4863 14337 HBL1_DMSO_200M_050219_2,14345 HBL1_DMSO_200M_050219_2,14345,KMYEEFLSKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14346 75.655 289.0 328350.0 25 0 36919.0 + 38833 TVIAENELLGA 11 139 565.308035030773 1128.601517128346 2 565.3088256716728 MULTI CID FTMS 0 0 0 14337 250077.515625 1.0 0 0.0 9 Unmodified _TVIAENELLGA_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 63.960520009940105 0.0530716371881472 4 {NN|[MP]|[D{I|L}]|[EV]}QAE{I|L}S{I|L}{I|L}Q 10 6 + 58.153 0.0 0.0 5.1527 5.1527 72.531 0.0 0.0 0.0 2.195852192889461 7.7102154270018275 2.195852192889461 2.195852192889461 0 0.8935078169319297 1.6989700043360187 0.9247425010840048 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}QAE{I|L}S{I|L}{I|L}Q;{[TV]|[{I|L}S]}{I|L}AENE{I|L}{I|L}Q;{[QN]|[E{I|L}]|[KN]}NAE{I|L}S{I|L}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}[AG]AE{I|L}S{I|L}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}AE{I|L}S{I|L}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}EA{I|L}{I|L}S{I|L}{I|L}Q;[AG]DEA{I|L}{I|L}S{I|L}{I|L}Q;[AG]D{I|L}AE{I|L}S{I|L}{I|L}Q;{[TV]|[{I|L}S]}{I|L}AEGGE{I|L}{I|L}Q;{[QN]|[E{I|L}]|[KN]}ANE{I|L}S{I|L}{I|L}Q 5.1527;4.9581;4.4701;4.3406;4.2707;4.2707;4.2361;4.2361;3.8087;3.7806 -;-;-;-;-;-;-;-;-;- 1995 1 1.148 76097.7 1.0 9481 4863 14337 HBL1_DMSO_200M_050219_2,14346 HBL1_DMSO_200M_050219_2,14346,TVIAENELLGA True True TVIAENELLGA 75.654739 565.308825671673 2033586.0 14337.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 6.089503129323323 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14347 75.658 143.0 666970.0 25 0 55213.0 + -1 LSSCIVSDI 9 130 497.2486271719287 992.4827014106576 2 497.2489501833916 MULTI CID FTMS 0 0 0 14337 237950.03125 1.0 0 0.0 10 Carbamidomethyl (C) _LSSC(Carbamidomethyl (C))IVSDI_ REV__ENSG00000166603|ENST00000299766|MC4R 16.942295170755138 0.3780752226737986 4 T{I|L}{I|L}[YV]D{I|L} 7 -1 18.153 0.0 0.0 1.829 0.0 0.0 157.02003283271898 0.0 157.02003283271898 0.0 4.658132283468962 0.0 0.0 0 0.0 0.0 0.5 0.0 T{I|L}{I|L}[YV]D{I|L} 1.829 - 1058 + 1 1.148 74045.0 1.0 9482 4863 14337 HBL1_DMSO_200M_050219_2,14347 HBL1_DMSO_200M_050219_2,14347,LSSCIVSDI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14348 75.67 621.0 387470.0 25 0 49420.0 + 29833 QQLLKRAHVE 10 158 611.3562878849376 1220.6980228366751 2 611.3550903201103 MULTI CID FTMS 0 0 0 14337 238899.78125 0.0928864635934983 -9 0.816558837890625 11 Unmodified _QQLLKRAHVE_ REV__ENSG00000039139|ENST00000265104|DNAH5 6.2057823575117 0.6979311171683138 4 V 1 -1 8.9258 0.0 0.0 0.7312 0.0 0.0 1103.618598863822 0.0 1103.618598863822 0.0 -0.5195306798610968 -0.5195306798610968 0.0 0 0.0 0.0 0.0 0.0 V 0.7312 + + 87 + 1 1.148 174354.7 1.0 9483 4863 14337 HBL1_DMSO_200M_050219_2,14348 HBL1_DMSO_200M_050219_2,14348,QQLLKRAHVE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14349 75.674 218.0 476570.0 25 0 26155.0 + 12241 GQYEPHFDFA 10 134 605.7622755366425 1209.509998140085 2 605.7617675662041 MULTI CID FTMS 0 0 0 14337 221772.421875 0.6403321648934044 -1 0.0507278442382812 12 Unmodified _GQYEPHFDFA_ ENSG00000122884|ENST00000394890|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1 49.93300154707207 0.0805441195901191 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{M(Oxidation (M))|F}VPEY 8 8 41.609 0.0 0.0 3.4402 0.0 0.0 0.0 182.0563784411153 182.0563784411153 3.99674684468792 0.0 0.0 0.0 0 1.1237125054200234 1.6989700043360187 0.805462187404089 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{M(Oxidation (M))|F}VPEY 3.4402 - 2888 1 1.148 78039.6 1.0 9484 4863 14337 HBL1_DMSO_200M_050219_2,14349 HBL1_DMSO_200M_050219_2,14349,GQYEPHFDFA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14350 75.688 800.0 122490.0 25 0 28535.0 + 26647 NYFCRNEMS 9 63 1163.4621722170982 1162.4548957504985 1 1163.461596667767 MULTI CID FTMS 0 0 0 14337 212761.46875 0.8165924610677726 2 -0.2266311645507812 13 Unmodified _NYFCRNEMS_ REV__ENSG00000113924|ENST00000283871|HGD 1.844237919475145 0.850302753031785 4 E 1 -1 6.9897 0.0 0.0 0.60129 0.0 0.0 506.22595474586905 524.1623116703483 1030.3882664162174 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.60129 + + 9 + 1 1.148 82584.3 0.9399999976158142 9485 4863 14337 HBL1_DMSO_200M_050219_2,14350 HBL1_DMSO_200M_050219_2,14350,NYFCRNEMS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14351 75.693 271.0 413810.0 25 0 36092.0 34158 SLLYVFTL 8 140 478.2764568409711 954.5383607487422 2 478.2767516970634 MULTI CID FTMS 0 0 0 14337 216633.171875 0.8532367000038401 -1 0.0507278442382812 14 Unmodified _SLLYVFTL_ ENSG00000221836|ENST00000641693|OR2A5 19.438996006549623 0.6237395211498085 4 [EP]GA{I|L}VA 7 8 28.406 0.0 0.0 2.9759 0.0 0.0 0.0 314.17212474704223 314.17212474704223 4.225271764150861 0.0 0.0 0.0 0 0.0 0.5086383061657274 0.0 0.0 [EP]GA{I|L}VA 2.9759 - 751 1 1.148 91038.9 1.0 9486 4863 14337 HBL1_DMSO_200M_050219_2,14351 HBL1_DMSO_200M_050219_2,14351,SLLYVFTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14352 75.705 692.0 267690.0 25 0 18050.0 + 174 AAMNPDAVLRV 11 196 578.8113891328069 1155.6082253324137 2 578.8112060427666 MULTI CID FTMS 0 0 0 14337 198648.234375 1.0 0 0.0 15 Unmodified _AAMNPDAVLRV_ ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1;nc|ENSG00000162813|O95861-3|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1 42.312485326615175 0.1767732348921932 4 AAMNPDAV{I|L}RV 11 0 + 62.215 0.0 0.0 5.3838 5.3838 72.022 0.0 0.0 0.0 17.033348097384682 1.4266750356873104 1.4266750356873104 1.4266750356873104 0 0.5941876774005248 1.0457574905606752 0.0 0.5629529932484498 + + AAMNPDAV{I|L}RV;AAMNPDAV[RV]{I|L};AAMNPWV{I|L}RV;AAMNPWV[RV]{I|L};AAMGGPDAV{I|L}RV;AAMGGPDAV[RV]{I|L};AAMNVA[DP]{I|L}RV;AAMNVA[DP][RV]{I|L};AAMGGPWV{I|L}RV;AAMGGPWV[RV]{I|L} 5.3838;5.2603;4.8147;4.6913;4.5938;4.4704;4.243;4.1196;4.0217;3.8982 +;-;-;-;-;-;-;-;-;- + 1801 + 1 1.148 142204.4 1.0 9487 4863 14337 HBL1_DMSO_200M_050219_2,14352 HBL1_DMSO_200M_050219_2,14352,AAMNPDAVLRV False True AAMNPDAVLRV 75.704649 578.811206042767 1771119.5 14337.0 nc|ENSG00000162813|O95861-2|BPNT1;;ENSG00000162813|ENST00000322067|BPNT1;;nc|ENSG00000162813|O95861-3|BPNT1;;nc|ENSG00000162813|O95861-4|BPNT1 6.09953514734904 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14353 75.718 691.0 159670.0 25 0 23933.0 + 19287 LEKRNKGRVSL 11 167 650.3961092649681 1298.777665596736 2 650.3958618044853 MULTI CID FTMS 0 0 0 14337 168526.75 0.7771657336129553 1 -0.1706619262695312 16 Unmodified _LEKRNKGRVSL_ REV__ENSG00000172803|ENST00000308342|SNX32;REV__ENST00000526972.5_1_11:65617878-65618753:+|nuORF;REV__ENST00000530101.5_1_11:65601488-65618753:+|nuORF;REV__nc|ENSG00000172803|Q86XE0-2|SNX32 2.498486711656943 0.8633599123570009 4 {I|L} 1 -1 11.259 0.0 0.0 0.8669 0.0 0.0 1167.682708176617 0.0 1167.682708176617 0.0 -0.7923088537598133 -0.7923088537598133 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.8669 + + 126 + 1 1.148 94002.8 1.0 9488 4863 14337 HBL1_DMSO_200M_050219_2,14353 HBL1_DMSO_200M_050219_2,14353,LEKRNKGRVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14354 75.731 783.0 92230.0 25 0 9980.0 -1 0 85 1005.476235382658 3013.406876748174 3 1006.147021472454 MULTI CID FTMS 0 0 0 14337 156096.515625 0.6591516136656138 1 -0.1706619262695312 17 4 [NP]{I|L}N 4 -1 13.188 0.0 0.0 0.43763 0.0 0.0 0.0 2572.159750853896 2572.159750853896 6.197887582883936 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}N 0.43763 - 54 1 1.148 57234.2 1.0 9489 4863 14337 HBL1_DMSO_200M_050219_2,14354 HBL1_DMSO_200M_050219_2,14354, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14355 75.744 740.0 244980.0 25 0 16164.0 + 30918 RIVQELPQL 9 203 548.3296977246763 1094.6448425161525 2 548.8052245974541 MULTI CID FTMS 0 0 0 14337 32555.181640625 1.0 0 0.0 18 Unmodified _RIVQELPQL_ ENSG00000144959|ENST00000475381|NCEH1;nc|ENSG00000144959|Q6PIU2-2|NCEH1;nc|ENSG00000144959|Q6PIU2-3|NCEH1 32.78568957990786 0.1150597335874693 4 {[VA]|[{I|L}G]}[R{I|L}]W{I|L}PQ{I|L} 9 4 + 36.759 0.0 0.0 3.3581 3.3581 65.519 0.0 0.0 0.0 7.353873933400919 12.577665134959538 7.353873933400919 1.7609125905568206 0 0.8945990182825423 1.6989700043360187 0.0 0.3252574989159953 {[VA]|[{I|L}G]}[R{I|L}]W{I|L}PQ{I|L};{[VA]|[{I|L}G]}A[RV]E{I|L}PQ{I|L};{[VA]|[{I|L}G]}[R{I|L}]GE{I|L}PQ{I|L};{[VA]|[{I|L}G]}AVVW{I|L}PQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}QKTH{I|L};{[VA]|[{I|L}G]}AVVGE{I|L}PQ{I|L};{[VA]|[{I|L}G]}G[R{I|L}]E{I|L}PQ{I|L};{[VA]|[{I|L}G]}G[{I|L}V]W{I|L}PQ{I|L};[{I|L}P][KT]W{I|L}PQ{I|L};{[VA]|[{I|L}G]}G[{I|L}V]GE{I|L}PQ{I|L} 3.3581;3.1972;3.0831;2.9468;2.6863;2.6758;2.4863;2.2359;1.9999;1.9649 -;-;-;-;-;-;-;-;-;- 2517 1 1.148 144159.9 1.0 9490 4863 14337 HBL1_DMSO_200M_050219_2,14355 HBL1_DMSO_200M_050219_2,14355,RIVQELPQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14356 75.758 726.0 253160.0 25 0 21212.0 -1 ILPCVPKHSL 10 181 582.335248833607 1162.655944734014 2 582.3341552615166 MULTI CID FTMS 0 0 0 14337 140420.453125 0.1114531630546894 9 -0.8434829711914062 19 Carbamidomethyl (C) _ILPC(Carbamidomethyl (C))VPKHSL_ ENST00000595531.5_1_2:105883140-105883392:-|nuORF 7.289230182591677 0.6929195370588109 4 [Y{M(Oxidation (M))|F}]RD{[CA]|SS}VY 8 -1 28.193 0.0 0.0 2.4249 0.0 0.0 0.0 142.17447435731393 142.17447435731393 11.122731327798544 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.2742275032520141 [Y{M(Oxidation (M))|F}]RD{[CA]|SS}VY 2.4249 - 1668 1 1.148 139227.3 1.0 9491 4863 14337 HBL1_DMSO_200M_050219_2,14356 HBL1_DMSO_200M_050219_2,14356,ILPCVPKHSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14357 75.764 305.0 293370.0 25 0 21984.0 + + -1 YPPGAILV 8 96 829.8299635483472 1657.6453741634944 2 829.8322021365166 MULTI CID FTMS 0 0 0 14337 129223.21875 0.3055918944017353 -1 0.0507278442382812 20 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))YYQLRC(Carbamidomethyl (C))YC(Carbamidomethyl (C))L_ ENSG00000163214|ENST00000457308|DHX57 0.3506318815782774 0.8734936314171269 4 {[VA]|[{I|L}G]}[PA]{M(Oxidation (M))|F}{I|L}{I|L}VP 9 -1 45.864 0.0 0.0 2.7668 0.0 0.0 0.0 747.0885864039818 747.0885864039818 26.413187455970544 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}[PA]{M(Oxidation (M))|F}{I|L}{I|L}VP 2.7668 - 828 1 1.148 66409.2 1.0 9492 4863 14337 HBL1_DMSO_200M_050219_2,14357 HBL1_DMSO_200M_050219_2,14357,CCYYQLRCYCL False False YPPGAILV 75.763609 829.832202136517 953687.25 14337.0 ENSG00000163214|ENST00000457308|DHX57 3.134449005126953 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14359 75.768 1.9 23518000.0 25 0 2740400.0 + 41009 VMAPRTVLL 9 57 500.3047063217554 998.5948597103109 2 500.3052245974541 MULTI CID FTMS 0 0 0 14358 28750712.0 1.0 0 0.0 1 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 26.268140514670165 0.1969607489560049 4 VMAP 4 5 54.553 0.0 0.0 5.4629 0.0 0.0 0.0 597.3758638971311 597.3758638971311 14.872118693881546 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + VMAP 5.4629 + + 27 + 1 1.155 38365.0 1.0 9493 4864 14358 HBL1_DMSO_200M_050219_2,14359 HBL1_DMSO_200M_050219_2,14359,VMAPRTVLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14360 75.769 6.8 5536200.0 25 0 635760.0 + 10585 FVIRNIVEA 9 60 530.8112621275001 1059.6079713218 2 530.8116943240166 MULTI CID FTMS 0 0 0 14358 5198297.5 0.2106890100963626 2 -0.1019821166992187 2 Unmodified _FVIRNIVEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 28.486842064014134 0.1687311288560894 4 {I|L}VEA 4 5 18.262 0.0 0.0 1.7235 0.0 0.0 629.3672178214144 0.0 629.3672178214144 0.0 4.767645663007638 0.0 0.0 0 0.5074908058443608 0.0 0.0 0.0 + {I|L}VEA 1.7235 + + 18 1 1.155 38683.1 1.0 9494 4864 14358 HBL1_DMSO_200M_050219_2,14360 HBL1_DMSO_200M_050219_2,14360,FVIRNIVEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14361 75.77 3.8 13619000.0 25 0 2224400.0 + 34914 SQIHDIVLV 9 68 512.295183320633 1022.575813708066 2 512.2955810427666 MULTI CID FTMS 0 0 0 14358 13684274.0 0.7514602220596276 1 -0.05596923828125 3 Unmodified _SQIHDIVLV_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 23.78978130925829 0.2284941198415988 4 D{I|L}V{I|L}V 5 4 50.261 0.0 0.0 4.9151 0.0 0.0 465.2349415509781 0.0 465.2349415509781 0.0 32.32902204431447 0.0 0.0 0 0.8807196863200843 0.0 0.3494850021680094 0.0 + D{I|L}V{I|L}V 4.9151 + + 131 1 1.155 44606.2 1.0 9495 4864 14358 HBL1_DMSO_200M_050219_2,14361 HBL1_DMSO_200M_050219_2,14361,SQIHDIVLV False True SQIHDIVLV 75.770396 512.295581042767 300854528.0 14358.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 6.781505584716797 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14362 75.772 26.0 2330900.0 25 0 263600.0 + 35088 SQVEPLPSL 9 82 485.26620649575534 968.5178600583108 2 485.2667724490166 MULTI CID FTMS 0 0 0 14358 2191458.0 1.0 0 0.0 4 Unmodified _SQVEPLPSL_ ENSG00000160294|ENST00000291688|MCM3AP 92.65332237495696 0.0139087009896299 4 {[QS]|[NT]}VEP{I|L} 6 3 51.577 0.0 0.0 5.3253 0.0 0.0 0.0 312.15611081543005 312.15611081543005 23.14945225666269 0.0 0.0 0.0 0 1.0994850021680094 0.0 1.055462187404089 0.6382104921644451 + {[QS]|[NT]}VEP{I|L} 5.3253 + + 477 1 1.155 54218.8 1.0 9496 4864 14358 HBL1_DMSO_200M_050219_2,14362 HBL1_DMSO_200M_050219_2,14362,SQVEPLPSL True True SQVEPLPSL 75.771575 485.266772449017 15165428.0 14358.0 ENSG00000160294|ENST00000291688|MCM3AP 4.704073270161946 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14363 75.773 30.0 2215000.0 25 0 252290.0 + + 30773 RVTGGIFSV 9 72 468.2693520675198 934.5241512018396 2 468.2693969607353 MULTI CID FTMS 0 0 0 14358 2010389.375 1.0 0 0.0 5 Unmodified _RIAKDFSV_ ENSG00000151135|ENST00000280756|TMEM263 37.97399986684836 0.2681860861828418 4 {I|L}{M(Oxidation (M))|F}SV 4 -1 46.23 0.0 0.0 4.9469 0.0 0.0 470.2602960611453 0.0 470.2602960611453 0.0 17.65632993002777 0.0 0.0 0 1.3494850021680094 0.0 0.3807196863200844 0.0 {I|L}{M(Oxidation (M))|F}SV 4.9469 - 51 1 1.155 57732.0 1.0 9497 4864 14358 HBL1_DMSO_200M_050219_2,14363 HBL1_DMSO_200M_050219_2,14363,RIAKDFSV False False RVTGGIFSV 75.772755 468.269396960735 15555827.0 14358.0 ENSG00000151135|ENST00000280756|TMEM263 3.801234324773153 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14364 75.774 20.0 2815500.0 25 0 278860.0 + 22222 LPRDTLLSV 9 96 507.30379550168 0 507.3035461306572 PEAK CID FTMS 0 0 0 14358 1266118.0 1.0 0 0.0 6 Unmodified _LPRDTLLSV_ ENSG00000137200|ENST00000373451|CMTR1 24.020572477871973 0.1646235280836931 4 {I|L}{I|L} 2 7 15.969 0.0 0.0 1.5771 0.0 0.0 204.11305391051764 579.2901095025999 783.4031634131175 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 1.5771 + + 178 + 1 1.155 50818.3 1.0 9498 4864 14358 HBL1_DMSO_200M_050219_2,14364 HBL1_DMSO_200M_050219_2,14364,LPRDTLLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14365 75.775 28.0 2030000.0 25 0 242420.0 + 21326 LPFAVWALI 9 77 515.3099999772943 1028.6054470213885 2 515.3105346560478 MULTI CID FTMS 0 0 0 14358 1220129.0 0.6112866530465191 1 -0.05596923828125 7 Unmodified _LPFAVWALI_ REV__ENSG00000109099|ENST00000312280|PMP22;REV__ENST00000395936.5_2_17:15134236-15138539:-|nuORF;REV__ENST00000494511.5_1_17:15134236-15168564:-|nuORF 28.17323086031832 0.1727213568982648 4 AD{I|L} 3 -1 36.995 0.0 0.0 3.5966 0.0 0.0 711.4649007033499 0.0 711.4649007033499 0.0 11.308422131034844 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.0 AD{I|L} 3.5966 - 96 1 1.155 52116.9 1.0 9499 4864 14358 HBL1_DMSO_200M_050219_2,14365 HBL1_DMSO_200M_050219_2,14365,LPFAVWALI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14366 75.777 68.0 1381100.0 25 0 350770.0 + 32261 RWPDYVREL 9 72 617.3224849501827 1232.6304169671653 2 617.3228027224541 MULTI CID FTMS 0 0 0 14358 922997.5 0.3606849946331842 -13 1.2577896118164062 8 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 23.80106514851385 0.2283505500606397 4 RWPD{I|L} 5 4 54.157 0.0 0.0 4.3936 0.0 0.0 0.0 562.2623385065061 562.2623385065061 17.971062485323515 0.0 0.0 0.0 0 1.3494850021680094 1.5228787452803376 0.0 0.0 RWPD{I|L} 4.3936 - 126 + 1 1.155 74811.5 1.0 9500 4864 14358 HBL1_DMSO_200M_050219_2,14366 HBL1_DMSO_200M_050219_2,14366,RWPDYVREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14367 75.778 50.0 1161000.0 25 0 135240.0 + 12836 GVVDGIYRL 9 79 496.28326611709247 990.551979300985 2 496.2827941775322 MULTI CID FTMS 0 0 0 14358 789398.6875 1.0 0 0.0 9 Unmodified _GVVDGIYRL_ ENSG00000004777|ENST00000007510|ARHGAP33;ENSG00000186517|ENST00000368013|ARHGAP30;ENST00000461003.5_1_1:161022982-161039420:-|nuORF;nc|ENSG00000004777|O14559-10|ARHGAP33;nc|ENSG00000004777|O14559-11|ARHGAP33;nc|ENSG00000186517|Q7Z6I6-2|ARHGAP30;nc|ENSG00000186517|Q7Z6I6-4|ARHGAP30 25.399314129420983 0.2080152500878129 4 [VG]VD{I|L}G[YR]{I|L} 9 2 + 60.596 0.0 0.0 6.1174 6.1174 78.118 0.0 0.0 0.0 47.83141526060586 4.436974992327123 4.436974992327123 3.0102999566398125 0 0.7742275032520141 2.0 0.0 0.0 [VG]VD{I|L}G[YR]{I|L};[VG]V{I|L}DG[YR]{I|L};[VG]{I|L}VDG[YR]{I|L};[VG]V{[RE]|[WV]}[YR]{I|L};[VG]{I|L}[RD][YR]{I|L} 6.1174;5.8135;5.1567;3.8743;3.2176 -;-;-;-;- 107 + 1 1.155 51510.7 1.0 9501 4864 14358 HBL1_DMSO_200M_050219_2,14367 HBL1_DMSO_200M_050219_2,14367,GVVDGIYRL False True GVVDGIYRL 75.778061 496.282794177532 5353192.5 14358.0 ENSG00000004777|ENST00000007510|ARHGAP33;;nc|ENSG00000004777|O14559-11|ARHGAP33;;nc|ENSG00000186517|Q7Z6I6-2|ARHGAP30;;nc|ENSG00000004777|O14559-10|ARHGAP33;;nc|ENSG00000186517|Q7Z6I6-4|ARHGAP30;;ENST00000461003.5_1_1:161022982-161039420:-|nuORF;;ENSG00000186517|ENST00000368013|ARHGAP30 4.879504362742106 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14368 75.78 62.0 581010.0 25 0 101360.0 + 41940 VQIDDSYLVEA 11 69 626.3087144847048 1250.6028760362094 2 626.3092529177666 MULTI CID FTMS 0 0 0 14358 741872.625 0.3378147963012946 2 -0.1019821166992187 10 Unmodified _VQIDDSYLVEA_ ENSG00000140548|ENST00000268154|ZNF710 33.4449034751529 0.3133739643825231 4 {NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[VA]|[{I|L}G]}Q{I|L}[W{I|L}] 10 9 + 40.123 0.0 0.0 3.2083 3.2083 78.192 0.0 0.0 0.0 2.550274515365061 23.160612466810587 2.550274515365061 14.753865789229074 0 0.5 1.2218487496163564 1.1989700043360187 0.0 {NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[VA]|[{I|L}G]}Q{I|L}[W{I|L}];{[TV]|[{I|L}S]}Y{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}Q{[{M(Oxidation (M))|F}H]|[RQ]}[RH][W{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}E{[{M(Oxidation (M))|F}H]|[RQ]}[RH][W{I|L}] 3.2083;2.0286;1.1265;0.0086858 -;-;-;- 223 1 1.155 36056.1 1.0 9502 4864 14358 HBL1_DMSO_200M_050219_2,14368 HBL1_DMSO_200M_050219_2,14368,VQIDDSYLVEA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14369 75.781 73.0 666730.0 25 0 136780.0 + 26212 NQIEDNDDFQL 11 67 675.7937284084774 1349.5729038837546 2 675.7947875857353 MULTI CID FTMS 0 0 0 14358 742815.1875 0.0423598147189476 4 -0.3373031616210937 11 Unmodified _NQIEDNDDFQL_ ENSG00000163535|ENST00000357799|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2 49.52724829834842 0.1202481389936634 4 {[QN]|[E{I|L}]|[KN]}{I|L}EDNDD 8 3 53.493 0.0 0.0 3.9637 0.0 0.0 0.0 403.1957415114892 403.1957415114892 36.7883841432739 0.0 0.0 0.0 0 0.0 0.0 0.0 1.5356668758921828 + {[QN]|[E{I|L}]|[KN]}{I|L}EDNDD 3.9637 + + 151 1 1.155 42237.7 1.0 9503 4864 14358 HBL1_DMSO_200M_050219_2,14369 HBL1_DMSO_200M_050219_2,14369,NQIEDNDDFQL True True NQIEDNDDFQL 75.781307 675.794787585735 455404800.0 14358.0 ENSG00000163535|ENST00000357799|SGO2;;nc|ENSG00000163535|Q562F6-2|SGO2 9.613948980967203 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14370 75.783 64.0 847360.0 25 0 73610.0 + 13401 HLLGEGAFAQV 11 80 571.3029951562213 1140.5914373792425 2 571.3040649294853 MULTI CID FTMS 0 0 0 14358 584919.875 1.0 0 0.0 12 Unmodified _HLLGEGAFAQV_ ENSG00000169679|ENST00000302759|BUB1;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 27.628801355627647 0.4434699450731472 4 [H{I|L}]{I|L}[WQ]{M(Oxidation (M))|F}AN{I|L} 9 6 + 26.199 0.0 0.0 2.297 2.297 69.832 0.0 0.0 0.0 1.2808662664650363 4.772370411214478 1.2808662664650363 5.904216839158881 0 0.4204841662593096 0.8860566476931632 0.0 0.0 [H{I|L}]{I|L}[WQ]{M(Oxidation (M))|F}AN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V[W{M(Oxidation (M))|F}][HV]N{I|L} 2.297;1.7793 -;- 94 1 1.155 49858.8 1.0 9504 4864 14358 HBL1_DMSO_200M_050219_2,14370 HBL1_DMSO_200M_050219_2,14370,HLLGEGAFAQV False True HLLGEGAFAQV 75.782867 571.304064929485 4387545.5 14358.0 nc|ENSG00000169679|O43683-2|BUB1;;ENSG00000169679|ENST00000302759|BUB1;;nc|ENSG00000169679|O43683-3|BUB1 5.523061275482178 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14371 75.785 125.0 590800.0 25 0 84751.0 + 4396 DAVQLNVI 8 106 436.2478764930413 870.4812000528825 2 436.2479431033134 MULTI CID FTMS 0 0 0 14358 485936.0625 0.2784884896695329 2 -0.1019821166992187 13 Unmodified _DAVQLNVI_ ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF 21.74664581756881 0.5868176546531598 4 {[DA]|[EG]}VQ{I|L} 5 3 36.937 0.0 0.0 4.2433 0.0 0.0 0.0 341.1832974111408 341.1832974111408 13.226339158071028 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.25 0.0 + {[DA]|[EG]}VQ{I|L} 4.2433 + + 214 1 1.155 63089.4 1.0 9505 4864 14358 HBL1_DMSO_200M_050219_2,14371 HBL1_DMSO_200M_050219_2,14371,DAVQLNVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14372 75.787 80.0 629160.0 25 0 44111.0 + 29632 QMISRIEYI 9 78 576.8080936377934 1151.601634342387 2 576.8083984255791 MULTI CID FTMS 0 0 0 14358 489936.75 1.0 0 0.0 14 Unmodified _QMISRIEYI_ ENSG00000141551|ENST00000314028|CSNK1D;ENSG00000213923|ENST00000396832|CSNK1E;ENST00000578904.1_1_17:80208040-80213403:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D 53.832793166522166 0.0319663582346103 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}WWY{I|L} 8 4 + 40.323 0.0 0.0 3.5014 3.5014 80.845 0.0 0.0 0.0 2.632965752203233 16.56681865368853 2.632965752203233 33.72100356406669 0 1.742992819099939 1.3010299956639813 0.0 0.9247425010840048 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}WWY{I|L};[TP][R{M(Oxidation (M))|F}]P{[QN]|[E{I|L}]|[KN]}[RH];[TP][R{M(Oxidation (M))|F}]P[Q{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[KC][RN]P{[QN]|[E{I|L}]|[KN]}[RH] 3.5014;0.57325;0.31185;0.24315 -;-;-;- 75 1 1.155 44128.4 1.0 9506 4864 14358 HBL1_DMSO_200M_050219_2,14372 HBL1_DMSO_200M_050219_2,14372,QMISRIEYI True True QMISRIEYI 75.787265 576.808398425579 4350427.0 14358.0 ENSG00000213923|ENST00000396832|CSNK1E;;nc|ENSG00000141551|P48730-2|CSNK1D;;ENSG00000141551|ENST00000314028|CSNK1D;;ENST00000578904.1_1_17:80208040-80213403:-|nuORF 3.339008887608846 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14373 75.792 283.0 476570.0 25 0 79873.0 + 35055 SQTGVQILM 9 150 488.75928501726406 975.504017101328 2 488.7610046267509 MULTI CID FTMS 0 0 0 14358 403412.125 0.1852039293822207 -6 0.6012954711914062 15 Unmodified _SQTGVQILM_ ENSG00000117174|ENST00000370574|ZNHIT6;nc|ENSG00000117174|Q9NWK9-2|ZNHIT6 43.77239144664712 0.0547478964384323 4 {[TV]|[{I|L}S]}GQSQ{I|L}{I|L}M 9 4 + 59.756 0.0 0.0 6.1257 6.1257 86.162 0.0 0.0 0.0 9.244079133909397 9.577570906191896 9.244079133909397 9.208187539523747 0 0.8935078169319297 1.6989700043360187 1.4957416651753048 0.0 {[TV]|[{I|L}S]}GQSQ{I|L}{I|L}M;{[TV]|[{I|L}S]}G[AG]SQ{I|L}{I|L}M;{[TV]|[{I|L}S]}GQS[AG]{I|L}{I|L}M;[Q{I|L}][SG]SQ{I|L}{I|L}M;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSQ{I|L}{I|L}M;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EVQ{I|L}{I|L}M;{[QS]|[NT]}TGVQ{I|L}{I|L}M;[VS]AQSQ{I|L}{I|L}M;[AG]STGVQ{I|L}{I|L}M;{[QV]|[N{I|L}]|[RA]|[KV]}GTSQ{I|L}{I|L}M 6.1257;5.1817;5.1817;5.178;4.7451;4.7401;4.6306;4.6197;4.4822;4.2431 -;-;-;-;-;-;+;-;-;- + 2658 1 1.155 105481.5 1.0 9507 4864 14358 HBL1_DMSO_200M_050219_2,14373 HBL1_DMSO_200M_050219_2,14373,SQTGVQILM True True SQTGVQILM 75.792455 488.761004626751 21653206.0 14358.0 nc|ENSG00000117174|Q9NWK9-2|ZNHIT6;;ENSG00000117174|ENST00000370574|ZNHIT6 4.493837197621663 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14374 75.795 150.0 498830.0 25 0 43055.0 -1 SFDRMVREA 9 114 563.7681095536366 1125.521666174073 2 563.7688476443291 MULTI CID FTMS 0 0 0 14358 382084.28125 0.7899257708508552 -2 0.2213897705078125 16 Oxidation (M) _SFDRM(Oxidation (M))VREA_ ENSG00000267909|ENST00000599174|CCDC177 19.256988751693697 0.3154191944385105 4 [MT]{[ES]|[DT]|[{I|L}C]}KVTMEA 10 -1 + 47.289 0.0 0.0 4.2015 4.2015 69.439 0.0 0.0 0.0 6.056722796270492 2.587170370326376 2.587170370326376 2.587170370326376 0 0.8882104921644451 1.5228787452803376 0.3054621874040891 0.0 [MT]{[ES]|[DT]|[{I|L}C]}KVTMEA;[MT]{[ES]|[DT]|[{I|L}C]}KEVT{[DS]|[MA]|[CV]|TT};[MT]{[ES]|[DT]|[{I|L}C]}KVET{[DS]|[MA]|[CV]|TT};[MT][KC]{I|L}VTMEA;[MT]{[MS]|[{M(Oxidation (M))|F}A]}VKVMEA;[MT]V{[MS]|[{M(Oxidation (M))|F}A]}KVMEA;[MT]{[ES]|[DT]|[{I|L}C]}EKVT{[DS]|[MA]|[CV]|TT};[MT][KC]V{I|L}TMEA;[MT]{[ES]|[DT]|[{I|L}C]}KVTE{[DS]|[MA]|[CV]|TT};[MT][KC]{I|L}EVT{[DS]|[MA]|[CV]|TT} 4.2015;3.9716;3.9501;3.6666;3.6634;3.6634;3.5477;3.5101;3.4832;3.4367 -;-;-;-;-;-;-;-;-;- 1259 1 1.155 61617.0 1.0 9508 4864 14358 HBL1_DMSO_200M_050219_2,14374 HBL1_DMSO_200M_050219_2,14374,SFDRMVREA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14375 75.805 526.0 253010.0 25 0 37688.0 -1 KKLKYMKQSL 10 151 641.8827479088961 1281.7509428845922 2 641.8827392458916 MULTI CID FTMS 0 0 0 14358 359671.625 0.8682607712653502 2 -0.1019821166992187 17 Oxidation (M) _KKLKYM(Oxidation (M))KQSL_ ENSG00000141371|ENST00000269127|CHCT1 3.2813086475875832 0.7114585191678878 4 V 1 -1 10.485 0.0 0.0 0.81799 0.0 0.0 1164.671404470821 0.0 1164.671404470821 0.0 1.1522446068913703 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.81799 - 210 + 1 1.155 103977.3 1.0 9509 4864 14358 HBL1_DMSO_200M_050219_2,14375 HBL1_DMSO_200M_050219_2,14375,KKLKYMKQSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14376 75.807 137.0 633420.0 25 0 58479.0 + 4389 DAVNLQNYV 9 124 518.2583855575016 1034.502218181803 2 518.2588378787041 MULTI CID FTMS 0 0 0 14358 366550.09375 1.0 0 0.0 18 Unmodified _DAVNLQNYV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 25.399314129420983 0.2080152500878129 4 {[DA]|[EG]}VN{I|L} 5 4 29.698 0.0 0.0 2.8707 0.0 0.0 0.0 519.217769289478 519.217769289478 15.718421963928437 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.2742275032520141 + {[DA]|[EG]}VN{I|L} 2.8707 + + 265 1 1.155 73089.1 1.0 9510 4864 14358 HBL1_DMSO_200M_050219_2,14376 HBL1_DMSO_200M_050219_2,14376,DAVNLQNYV False True DAVNLQNYV 75.807492 518.258837878704 2011185.5 14358.0 nc|ENSG00000104517|O95071-2|UBR5;;ENSG00000104517|ENST00000520539|UBR5 5.075809637705485 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14377 75.81 109.0 786780.0 25 0 57829.0 + -1 YPFKPPMI 8 102 504.7650954188452 1007.5156379044904 2 504.7642089724541 MULTI CID FTMS 0 0 0 14358 363582.375 1.0 0 0.0 19 Oxidation (M) _YPFKPPM(Oxidation (M))I_ ENSG00000156587|ENST00000287156|UBE2L6 34.18733598223924 0.3315367612694167 4 YP{M(Oxidation (M))|F}KPP{M(Oxidation (M))|F}{I|L} 8 -1 + 57.27 0.0 0.0 5.6842 5.6842 76.823 0.0 0.0 0.0 36.40978057358332 3.1078983295313733 3.1078983295313733 3.1078983295313733 0 0.3807196863200844 2.0 0.0 0.0 YP{M(Oxidation (M))|F}KPP{M(Oxidation (M))|F}{I|L};YP{M(Oxidation (M))|F}K{[{M(Oxidation (M))|F}H]|[RQ]}AV;YP{M(Oxidation (M))|F}KP[NG]SV;YP{M(Oxidation (M))|F}K{[{M(Oxidation (M))|F}H]|[RQ]}G{I|L};YP{M(Oxidation (M))|F}{[RE]|[WV]}[TP]V;YP{M(Oxidation (M))|F}{[RE]|[WV]}[PS]{I|L};YP{M(Oxidation (M))|F}{[QG]|[NA]}{[QV]|[N{I|L}]|[RA]|[KV]}AV;YP{M(Oxidation (M))|F}{[QG]|[NA]}{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}PK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}M{I|L}K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 5.6842;5.3758;5.1224;5.1145;4.2085;3.9472;3.4639;3.2027;1.8284;1.575 +;-;-;-;-;-;-;-;-;- + 200 + 1 1.155 69464.6 1.0 9511 4864 14358 HBL1_DMSO_200M_050219_2,14377 HBL1_DMSO_200M_050219_2,14377,YPFKPPMI False False YPFKPPMI 75.809784 504.764208972454 8154081.5 14358.0 ENSG00000156587|ENST00000287156|UBE2L6 8.058458805084229 2.0 True 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14378 75.819 548.0 273570.0 25 0 46610.0 + 35310 SSRRRRPRAP 10 143 619.8692950800139 1237.7240372268277 2 619.8693725466728 MULTI CID FTMS 0 0 0 14358 323518.5 0.4274308014158248 -8 0.766326904296875 20 Unmodified _SSRRRRPRAP_ REV__ENST00000402690.6_3_18:45423134-45457349:-|nuORF 1.4819007175156935 0.719781833666733 4 V 1 -1 9.5329 0.0 0.0 0.7702 0.0 0.0 1120.6445598482128 0.0 1120.6445598482128 0.0 6.768681730899919 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.7702 - 69 + 1 1.155 111835.0 1.0 9512 4864 14358 HBL1_DMSO_200M_050219_2,14378 HBL1_DMSO_200M_050219_2,14378,SSRRRRPRAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14380 75.824 22.0 2614500.0 25 0 363010.0 + 16377 IYQEKVLDL 9 82 560.8163640232482 1119.6181751132965 2 560.8165161013603 MULTI CID FTMS 0 0 0 14379 1091655.875 0.1111166853785621 2 -0.1710433959960937 1 Unmodified _IYQEKVLDL_ ENSG00000079616|ENST00000160827|KIF22;nc|ENSG00000079616|Q14807-2|KIF22 78.7280429016045 0.0178249292250809 4 {I|L}Y[{M(Oxidation (M))|F}V]{I|L}VQGD 9 6 79.451 0.0 0.0 7.0963 0.0 0.0 0.0 82.06685053043202 82.06685053043202 53.110984535811696 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.9436726795685344 2.1549471895720984 {I|L}Y[{M(Oxidation (M))|F}V]{I|L}VQGD 7.0963 - 845 + 1 1.155 49153.7 1.0 9513 4865 14379 HBL1_DMSO_200M_050219_2,14380 HBL1_DMSO_200M_050219_2,14380,IYQEKVLDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14381 75.825 31.0 1111900.0 25 0 260030.0 + 17424 KMYEEFLSKV 10 53 637.3284440033834 1272.6423350735668 2 637.3290283083916 MULTI CID FTMS 0 0 0 14379 550159.4375 0.2855811257550864 1 -0.0460128784179687 2 Unmodified _KMYEEFLSKV_ ENSG00000108946|ENST00000589228|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;nc|ENSG00000108946|P10644-2|PRKAR1A 12.35033696204008 0.6403153526215293 4 S{I|L}{M(Oxidation (M))|F}KMCCS 8 9 44.373 0.0 0.0 3.4867 0.0 0.0 245.17593520661632 125.07232080631094 370.2482560129272 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.3494850021680094 0.0 S{I|L}{M(Oxidation (M))|F}KMCCS 3.4867 - 78 + 1 1.155 35387.3 1.0 9514 4865 14379 HBL1_DMSO_200M_050219_2,14381 HBL1_DMSO_200M_050219_2,14381,KMYEEFLSKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14382 75.826 41.0 1722200.0 25 0 171990.0 + 41458 VPLPAENVTI 10 89 526.8030293126947 1051.5915056921892 2 526.8031494021416 MULTI CID FTMS 0 0 0 14379 687472.0625 0.2473547037892502 -2 0.2266311645507812 3 Unmodified _VPLPAENVTI_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 74.92900055777586 0.0187778523875693 4 [VP]{I|L}PAENVT{I|L} 10 0 + 69.676 0.0 0.0 6.6258 6.6258 75.061 0.0 0.0 0.0 0.4575749056067479 15.026975159433531 0.4575749056067479 0.4575749056067479 0 0.5 1.0457574905606752 0.5 0.7614393726401688 + + [VP]{I|L}PAENVT{I|L};[{I|L}P]VPAENVT{I|L};[{I|L}T]T[YK]NVT{I|L};[{I|L}T]T[YN]KVT{I|L};[{I|L}P][PA]VENVT{I|L};[{I|L}P][PA]EVNVT{I|L};[{I|L}T]T[YK]GGVT{I|L};[PA]ENV[{I|L}P]VT{I|L};[VP][C(Carbamidomethyl (C))H]VKVT{I|L};[VP]{I|L}PAEGGVT{I|L} 6.6258;6.5822;6.2728;5.9866;5.7501;5.5392;5.3972;5.3349;5.2211;5.0302 +;-;-;-;-;-;-;-;-;- + 997 1 1.155 62766.5 1.0 9515 4865 14379 HBL1_DMSO_200M_050219_2,14382 HBL1_DMSO_200M_050219_2,14382,VPLPAENVTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14383 75.828 62.0 886020.0 25 0 75715.0 -1 LLDECTSAV 9 81 504.2392851983788 1006.4640174635576 2 504.2391540408134 MULTI CID FTMS 0 0 0 14379 363373.8125 1.0 0 0.0 4 Carbamidomethyl (C) _LLDEC(Carbamidomethyl (C))TSAV_ ENSG00000101986|ENST00000218104|ABCD1;ENSG00000173208|ENST00000308666|ABCD2 19.438996006549623 0.310492472477042 4 {I|L}{I|L}[MD]K{M(Oxidation (M))|F}P 7 -1 24.481 0.0 0.0 2.4324 0.0 0.0 0.0 158.98926121746825 158.98926121746825 10.052358739752378 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}[MD]K{M(Oxidation (M))|F}P 2.4324 - 99 1 1.155 46161.3 1.0 9516 4865 14379 HBL1_DMSO_200M_050219_2,14383 HBL1_DMSO_200M_050219_2,14383,LLDECTSAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14384 75.83 118.0 551780.0 25 0 119660.0 7970 ELVAWFIKLF 10 80 633.3688785604222 1264.7232041876443 2 633.3696777224541 MULTI CID FTMS 0 0 0 14379 353037.53125 0.3891810153871381 2 -0.1710433959960937 5 Unmodified _ELVAWFIKLF_ ENST00000494129.1_1_2:192246088-192252282:+|nuORF 1.6526216038709556 0.7189921496796233 4 {I|L} 1 9 9.3971 0.0 0.0 0.74302 0.0 0.0 1133.6285366845177 0.0 1133.6285366845177 0.0 9.119543704721591 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.74302 + + 13 + 1 1.155 57179.2 1.0 9517 4865 14379 HBL1_DMSO_200M_050219_2,14384 HBL1_DMSO_200M_050219_2,14384,ELVAWFIKLF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14385 75.833 101.0 501520.0 25 0 76694.0 28926 QARFLLVMLS 10 85 589.3431502497217 1176.6717475662433 2 589.3432494997978 MULTI CID FTMS 0 0 0 14379 284869.78125 0.0865746523464477 11 -1.0519027709960938 6 Unmodified _QARFLLVMLS_ ENSG00000128731|ENST00000261609|HERC2 3.5964929083625545 0.7100006075494749 4 {I|L} 1 9 10.969 0.0 0.0 0.93221 0.0 0.0 1045.5767596285464 0.0 1045.5767596285464 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.93221 + + 29 + 1 1.155 43431.6 1.0 9518 4865 14379 HBL1_DMSO_200M_050219_2,14385 HBL1_DMSO_200M_050219_2,14385,QARFLLVMLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14386 75.834 49.0 944980.0 25 0 55490.0 + 15582 IPYPLPPNY 9 94 537.2892171800312 1072.5638814268625 2 537.2866088747978 MULTI CID FTMS 0 0 0 14379 238698.25 0.2825408563494998 3 -0.2813339233398437 7 Unmodified _IPYPLPPNY_ ENSG00000134802|ENST00000395124|SLC43A3;ENST00000528098.5_1_11:57182763-57193651:-|nuORF;nc|ENSG00000134802|Q8NBI5-2|SLC43A3 58.6788170122104 0.0268135626297836 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}P[NP]Y 9 2 + 37.787 0.0 0.0 3.5231 3.5231 65.628 0.0 0.0 0.0 3.0102999566398125 3.1779592247781423 3.0102999566398125 1.7609125905568064 0 0.9247425010840048 1.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}P[NP]Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}{I|L}P[NP]Y;[{I|L}P]YP{I|L}P[NP]Y;[{I|L}P]{M(Oxidation (M))|F}{I|L}{I|L}P[NP]Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P[NG]V{I|L}[NS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}[RN][NS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}[NG]V{I|L}[NS];{[TV]|[{I|L}S]}[RN]{I|L}P[NP]Y;[{I|L}P]YP[NG]V{I|L}[NS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}{I|L}[RN][NS] 3.5231;3.3589;3.2424;3.0782;2.4114;2.2685;2.2472;2.1334;2.1307;2.1044 -;-;+;-;-;-;-;-;-;- + 298 1 1.155 43977.9 1.0 9519 4865 14379 HBL1_DMSO_200M_050219_2,14386 HBL1_DMSO_200M_050219_2,14386,IPYPLPPNY True True IPYPLPPNY 75.833858 537.286608874798 18789834.0 14379.0 ENST00000528098.5_1_11:57182763-57193651:-|nuORF;;ENSG00000134802|ENST00000395124|SLC43A3;;nc|ENSG00000134802|Q8NBI5-2|SLC43A3 6.053443749745687 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14387 75.839 288.0 366570.0 25 0 25870.0 + 36680 TCGYFQISCL 10 162 567.7512274827026 1133.487902032205 2 567.7510253787041 MULTI CID FTMS 0 0 0 14379 224225.078125 0.2326126392078464 2 -0.1710433959960937 8 Unmodified _TCGYFQISCL_ REV__ENST00000485364.1_1_20:31136574-31172692:-|nuORF 24.99096001346401 0.4071966087057876 4 [{M(Oxidation (M))|F}E]TKG{M(Oxidation (M))|F}CCS{I|L} 10 -1 + 48.911 0.0 0.0 4.3151 4.3151 66.116 0.0 0.0 0.0 0.5240357329983638 0.5240357329983638 0.5240357329983638 0.5240357329983638 0 0.941962823435958 0.0 1.4876954943324543 0.0 [{M(Oxidation (M))|F}E]TKG{M(Oxidation (M))|F}CCS{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}ASEGK[MD]{I|L};[{M(Oxidation (M))|F}T]KEG{M(Oxidation (M))|F}CCS{I|L};[{M(Oxidation (M))|F}T]EKG{M(Oxidation (M))|F}CCS{I|L};[{M(Oxidation (M))|F}E]TKWSACY;[KT]{M(Oxidation (M))|F}EG{M(Oxidation (M))|F}CCS{I|L};{[{M(Oxidation (M))|F}C]|[YS]}AC{M(Oxidation (M))|F}GK[MD]{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}ASEG{[WT]|[RM]}S{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}AS[MT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}ASEGEKMV 4.3151;4.2688;3.8941;3.6984;3.6454;3.592;3.5706;3.5576;3.4851;3.4676 -;-;-;-;-;-;-;-;-;- 1233 1 1.155 83744.8 1.0 9520 4865 14379 HBL1_DMSO_200M_050219_2,14387 HBL1_DMSO_200M_050219_2,14387,TCGYFQISCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14388 75.846 354.0 676340.0 25 0 115600.0 + 2806 ATVPGLLKV 9 124 449.2918332694791 896.5691136057583 2 449.2921630740166 MULTI CID FTMS 0 0 0 14379 213503.296875 0.1875116506830456 -2 0.2266311645507812 9 Unmodified _ATVPGLLKV_ ENSG00000179820|ENST00000391770|MYADM 46.020951573049366 0.0490941689151868 4 [TA]VPG{I|L}{I|L}KV 9 0 + 50.623 0.0 0.0 5.6463 5.6463 84.872 0.0 0.0 0.0 -1.718932289510711 11.962724883926654 -1.718932289510711 9.208187539523756 0 0.4247425010840047 1.3979400086720375 0.0 0.2887254899964357 + + [TA]VPG{I|L}{I|L}KV;[TA]VV[PA]{I|L}KV 5.6463;4.6192 +;- + 259 + 1 1.155 186116.0 1.0 9521 4865 14379 HBL1_DMSO_200M_050219_2,14388 HBL1_DMSO_200M_050219_2,14388,ATVPGLLKV True True ATVPGLLKV 75.84554 449.292163074017 16152275.0 14379.0 ENSG00000179820|ENST00000391770|MYADM 7.440284887949626 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14389 75.849 188.0 489930.0 25 0 57921.0 33620 SIQQRKAI 8 123 472.28775725673984 942.5609615802796 2 472.2879211306572 MULTI CID FTMS 0 0 0 14379 159579.75 0.0355244726445215 7 -0.616851806640625 10 Unmodified _SIQQRKAI_ ENSG00000171659|ENST00000378142|GPR34 13.50788311687929 0.7113601687236069 4 [{I|L}A]{[WT]|[RM]}[R{I|L}]A{I|L} 8 4 + 16.392 0.0 0.0 1.7391 1.7391 76.476 0.0 0.0 0.0 2.412669627871868 0.4499447439452115 0.4499447439452115 16.392069714592242 0 0.5 1.0969100130080565 0.0 0.0 [{I|L}A]{[WT]|[RM]}[R{I|L}]A{I|L} 1.7391 - 237 + 1 1.155 73662.9 1.0 9522 4865 14379 HBL1_DMSO_200M_050219_2,14389 HBL1_DMSO_200M_050219_2,14389,SIQQRKAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14390 75.851 75.0 1003400.0 25 0 67611.0 + 31179 RLPKDFVDL 9 96 551.8162546897389 1101.6179564462775 2 551.8160278201103 MULTI CID FTMS 0 0 0 14379 156335.390625 0.3438615607929295 -1 0.05596923828125 11 Unmodified _RLPKDFVDL_ ENSG00000151465|ENST00000281141|CDC123;ENST00000497963.1_1_10:12288111-12291735:+|nuORF;ENST00000498747.1_1_10:12279256-12292333:+|nuORF 19.361941925380144 0.3125782356748823 4 D{M(Oxidation (M))|F}VD{I|L} 5 4 41.498 0.0 0.0 3.767 0.0 0.0 494.3338795392594 0.0 494.3338795392594 0.0 36.01342204748164 0.0 0.0 0 0.6549471895720985 0.0 0.0 0.0 + D{M(Oxidation (M))|F}VD{I|L} 3.767 + + 92 1 1.155 63486.6 1.0 9523 4865 14379 HBL1_DMSO_200M_050219_2,14390 HBL1_DMSO_200M_050219_2,14390,RLPKDFVDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14391 75.857 323.0 293950.0 25 0 14270.0 -1 0 108 881.4134278490112 1760.8123027648223 2 881.9161865115166 MULTI CID FTMS 0 0 0 14379 136462.734375 0.1664208481351011 -2 0.2266311645507812 12 4 [KT]EY{M(Oxidation (M))|F}ANQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}C(Carbamidomethyl (C))V{I|L} 14 -1 + 83.417 0.0 0.0 4.7374 4.7374 51.425 0.0 0.0 0.0 56.0486403387454 4.047794332023429 4.047794332023429 0.0 0 0.3252574989159953 0.0 0.5501648626366046 1.2302046884880935 [KT]EY{M(Oxidation (M))|F}ANQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQAG{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQAG{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AGGQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[CG]V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V[CG]{I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]Q{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AGGQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]Q{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VC(Carbamidomethyl (C)){I|L} 4.7374;4.7374;4.6374;4.6374;4.2235;4.2235;4.2235;4.2235;4.2235;4.2235 -;-;-;-;-;-;-;-;-;- 8651 + 1 1.155 69009.5 1.0 9524 4865 14379 HBL1_DMSO_200M_050219_2,14391 HBL1_DMSO_200M_050219_2,14391, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14392 75.862 282.0 653720.0 25 0 53361.0 + 21821 LPNNMIYQV 9 153 546.280501128986 1090.546449324772 2 546.2802612185478 MULTI CID FTMS 0 0 0 14379 118456.5859375 0.3140674536365305 -2 0.2266311645507812 13 Unmodified _LPNNMIYQV_ ENSG00000102595|ENST00000376747|UGGT2 57.47134341890925 0.0274820932774257 4 {[VA]|[{I|L}G]}G[NP]M{I|L}YQV 10 3 + 39.49 0.0 0.0 3.6211 3.6211 72.085 0.0 0.0 0.0 5.544801891059926 6.121506059964545 5.544801891059926 5.544801891059926 0 0.788106835214472 1.0969100130080565 0.0 1.079689690656103 {[VA]|[{I|L}G]}G[NP]M{I|L}YQV;[NP]NM{I|L}{I|L}YQV;{[VA]|[{I|L}G]}G[NP]MY{I|L}QV;[AG]V[NP]M{I|L}YQV;[NP]N{I|L}M{I|L}YQV;{[QV]|[N{I|L}]|[RA]|[KV]}[NP]M{I|L}YQV;[NP]NM{I|L}Y{I|L}QV;[AG]V[NP]MY{I|L}QV;[NP]GGM{I|L}{I|L}YQV;[NP]N{I|L}MY{I|L}QV 3.6211;3.1127;2.9808;2.9802;2.6074;2.5684;2.4723;2.3398;2.2683;1.967 -;-;-;-;-;-;-;-;-;- 1114 1 1.155 153271.7 1.0 9525 4865 14379 HBL1_DMSO_200M_050219_2,14392 HBL1_DMSO_200M_050219_2,14392,LPNNMIYQV True True LPNNMIYQV 75.862006 546.280261218548 3379284.25 14379.0 ENSG00000102595|ENST00000376747|UGGT2 2.9547869662443795 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14393 75.865 175.0 461080.0 25 0 78316.0 + 12672 GVLLAWLSV 9 98 479.2906916875783 956.5668304419564 2 479.2906371951103 MULTI CID FTMS 0 0 0 14379 117619.6328125 0.3500354143379895 -1 0.05596923828125 14 Unmodified _GVLLAWLSV_ ENSG00000103227|ENST00000262301|LMF1;ENST00000569516.5_1_16:904534-921479:-|nuORF;nc|ENSG00000103227|Q96S06-2|LMF1 38.15118350030904 0.0856056900103839 4 [VG]{I|L}EGT{I|L}R{I|L} 9 5 + 73.81 0.0 0.0 7.7161 7.7161 92.304 0.0 0.0 0.0 43.6861766754586 10.088422267289133 10.088422267289133 9.532796692927263 0 1.610924374808178 1.6989700043360187 0.7302046884880937 0.0 [VG]{I|L}EGT{I|L}R{I|L};[VG]{I|L}WT{I|L}R{I|L};[VG]{I|L}E{I|L}{[SA]|[TG]}R{I|L};[VG]{I|L}{I|L}E{[SA]|[TG]}R{I|L};[VG]{I|L}E{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}TV;[VG]{I|L}E{I|L}[WK]{I|L};[VG]{I|L}E{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};[VG]{I|L}{I|L}E[WK]{I|L};[VG]{I|L}{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}TV;[VG]{I|L}{M(Oxidation (M))|F}[KP]TPV 7.7161;6.7195;6.302;5.8819;5.5645;5.3602;5.3593;5.2594;5.1444;5.1443 -;-;-;-;-;-;-;-;-;- 473 + 1 1.155 67769.5 1.0 9526 4865 14379 HBL1_DMSO_200M_050219_2,14393 HBL1_DMSO_200M_050219_2,14393,GVLLAWLSV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14395 75.87 4.1 14487000.0 25 0 1348000.0 + 16943 KILPTLEAV 9 87 492.310984543167 982.607416153134 2 492.3108703494072 MULTI CID FTMS 0 0 0 14394 12598038.0 0.8819897370813187 2 -0.235321044921875 1 Unmodified _KILPTLEAV_ ENSG00000143621|ENST00000361891|ILF2 32.78568957990786 0.1150597335874693 4 [{I|L}P]T{I|L}K{I|L}EAV 9 4 + 69.848 0.0 0.0 7.1084 7.1084 86.815 0.0 0.0 0.0 6.723930009344265 16.478174818886373 6.723930009344265 6.723930009344265 0 0.5 1.3979400086720375 0.8807196863200843 0.0 [{I|L}P]T{I|L}K{I|L}EAV;[TP]{I|L}{I|L}K{I|L}EAV;[{I|L}P]TE{I|L}[K{I|L}]AV;[{I|L}T]P{I|L}K{I|L}EAV;[TP]{I|L}E{I|L}[K{I|L}]AV;[{I|L}P]TEA{I|L}[K{I|L}]V;[{I|L}P]T{I|L}E[K{I|L}]AV;[{I|L}P]TE{I|L}A[K{I|L}]V;[TP]{I|L}EA{I|L}[K{I|L}]V;{[QN]|[E{I|L}]|[KN]}TP{I|L}[K{I|L}]AV 7.1084;6.4242;5.43;5.1536;4.7457;4.7419;4.5064;4.4355;4.0576;3.8568 -;-;-;-;-;-;-;-;-;- 783 1 1.166 51983.7 1.0 9527 4866 14394 HBL1_DMSO_200M_050219_2,14395 HBL1_DMSO_200M_050219_2,14395,KILPTLEAV True True KILPTLEAV 75.870027 492.310870349407 212974688.0 14394.0 ENSG00000143621|ENST00000361891|ILF2 4.834728240966797 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14396 75.871 38.0 1192700.0 25 0 127230.0 27357 PHVIVVSDSE 10 76 541.2779341848146 1080.5413154364292 2 541.2772704958916 MULTI CID FTMS 0 0 0 14394 503195.75 0.6643185277140713 2 -0.235321044921875 2 Unmodified _PHVIVVSDSE_ ENSG00000164318|ENST00000322350|EGFLAM;nc|ENSG00000164318|Q63HQ2|EGFLAM 7.289230182591677 0.6929195370588109 4 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F} 3 8 16.655 0.0 0.0 1.5414 0.0 0.0 0.0 728.3724060948854 728.3724060948854 5.818007052021871 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F} 1.5414 - 56 1 1.166 38668.5 1.0 9528 4866 14394 HBL1_DMSO_200M_050219_2,14396 HBL1_DMSO_200M_050219_2,14396,PHVIVVSDSE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14397 75.874 116.0 649200.0 25 0 72340.0 + 32270 RWPDYVREL 9 70 411.88402130637087 1232.6302345193126 3 411.8840209841728 MULTI CID FTMS 0 0 0 14394 486831.90625 0.4218928873503691 -8 0.703277587890625 3 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 49.55428908609986 0.0413471690215031 4 [WR]PDY 5 4 44.749 0.0 0.0 3.6304 0.0 0.0 0.0 512.2839271906224 512.2839271906224 27.43127848937604 0.0 0.0 0.0 0 1.3182503180159344 1.6989700043360187 0.3807196863200844 0.5796896906561032 + [WR]PDY 3.6304 + + 116 1 1.166 63576.6 1.0 9529 4866 14394 HBL1_DMSO_200M_050219_2,14397 HBL1_DMSO_200M_050219_2,14397,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14398 75.878 247.0 380750.0 25 0 33313.0 + 24894 MPNPSLAQVKI 11 121 599.336568604051 1196.6585842749018 2 599.3372070193291 MULTI CID FTMS 0 0 0 14394 362406.78125 0.6018687746349609 2 -0.235321044921875 4 Unmodified _MPNPSLAQVKI_ ENSG00000152240|ENST00000282058|HAUS1;nc|ENSG00000152240|Q96CS2-2|HAUS1 87.12335221954112 0.0023590323766729 4 MPNPS{I|L}AQVK{I|L} 11 0 + 102.0 0.0 0.0 8.524 8.524 80.308 0.0 0.0 0.0 31.8045606445813 0.6963592814139474 0.6963592814139474 0.6963592814139474 0 2.385151878060192 1.5228787452803376 0.5629529932484498 0.25 + + MPNPS{I|L}AQVK{I|L};MPNPS{I|L}AQV{I|L}K;MPGGPS{I|L}AQVK{I|L};MPNPS{I|L}A[AG]VK{I|L};MPGGPS{I|L}AQV{I|L}K;MPNPS{I|L}A[AG]V{I|L}K;MPGGPS{I|L}A[AG]VK{I|L};MPGGPS{I|L}A[AG]V{I|L}K;MPNPS{I|L}AQ[K{I|L}]V;MPGGPS{I|L}AQ[K{I|L}]V 8.524;8.4658;7.7612;7.7612;7.703;7.703;7.0009;6.9427;6.7234;5.9605 +;-;-;-;-;-;-;-;-;- + 926 + 1 1.166 74391.8 1.0 9530 4866 14394 HBL1_DMSO_200M_050219_2,14398 HBL1_DMSO_200M_050219_2,14398,MPNPSLAQVKI True True MPNPSLAQVKI 75.878237 599.337207019329 9425143.0 14394.0 nc|ENSG00000152240|Q96CS2-2|HAUS1;;ENSG00000152240|ENST00000282058|HAUS1 7.462536970774333 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14399 75.882 198.0 397100.0 25 0 52777.0 + 31522 RQIDVHIFNAV 11 75 437.9104731972942 1310.7095901920827 3 437.9106933474541 MULTI CID FTMS 0 0 0 14394 350527.09375 1.0 0 0.0 5 Unmodified _RQIDVHIFNAV_ ENSG00000124702|ENST00000326974|KLHDC3;ENST00000244670.12_1_6:42984918-42985899:+|nuORF 21.799462835604743 0.5803446114589816 4 [HV]{I|L}YVH{I|L}{M(Oxidation (M))|F}NAV 11 3 + 72.454 0.0 0.0 5.5279 5.5279 82.719 0.0 0.0 0.0 4.35728569561438 61.72853623761672 4.35728569561438 9.128498242811006 0 0.7742275032520141 0.0 0.0 0.0 [HV]{I|L}YVH{I|L}{M(Oxidation (M))|F}NAV;[HV]{I|L}YVH{I|L}{M(Oxidation (M))|F}GGAV;{[{M(Oxidation (M))|F}H]|[RQ]}{NN|[MP]|[D{I|L}]|[EV]}VH{I|L}{M(Oxidation (M))|F}NAV;{[{M(Oxidation (M))|F}H]|[RQ]}{NN|[MP]|[D{I|L}]|[EV]}VH{I|L}{M(Oxidation (M))|F}GGAV;[KP]{[WT]|[RM]}VH{I|L}{M(Oxidation (M))|F}NAV;[KP]{[WT]|[RM]}VH{I|L}{M(Oxidation (M))|F}GGAV;[HV]{I|L}{[WT]|[RM]}[KP]{M(Oxidation (M))|F}NAV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}{I|L}{M(Oxidation (M))|F}NAV;[KP]{[HG]|PP}A[KA]AT{M(Oxidation (M))|F}NAV;[KP]{[HG]|PP}C{I|L}{I|L}{I|L}{M(Oxidation (M))|F}NAV 5.5279;4.8314;4.7863;4.0898;4.0233;3.3269;2.8964;2.6881;2.551;2.5035 -;-;+;-;-;-;-;-;-;- + 236 1 1.166 69874.0 1.0 9531 4866 14394 HBL1_DMSO_200M_050219_2,14399 HBL1_DMSO_200M_050219_2,14399,RQIDVHIFNAV False True RQIDVHIFNAV 75.882021 437.910693347454 3746779.375 14394.0 ENST00000244670.12_1_6:42984918-42985899:+|nuORF;;ENSG00000124702|ENST00000326974|KLHDC3 9.329437891642252 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14400 75.885 152.0 468010.0 25 0 67108.0 + 43698 YAYDGKDYLAL 11 90 646.3140641308695 1290.613575328539 2 646.3135864138603 MULTI CID FTMS 0 0 0 14394 349127.15625 0.0855766581041514 -3 0.27264404296875 6 Unmodified _YAYDGKDYLAL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 47.7319792270244 0.130190323903946 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[QT]YAY{I|L}A{I|L} 11 5 + 54.842 0.0 0.0 4.2493 4.2493 65.11 0.0 0.0 0.0 13.239087409443188 7.257724967479859 7.257724967479859 0.2422750325201406 0 1.242992819099939 2.0 0.6505149978319906 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[QT]YAY{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[QT]{I|L}YAYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}YAYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[QT]YA{I|L}YA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[QT]Y{I|L}AYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}YA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DY{I|L}AYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[QT]{I|L}AYYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]{I|L}DYAYA{I|L} 4.2493;4.2306;4.1129;4.0941;4.0161;3.9973;3.8796;3.8609;3.8609;3.8421 -;-;-;-;-;-;-;-;-;- 1505 1 1.166 58740.2 1.0 9532 4866 14394 HBL1_DMSO_200M_050219_2,14400 HBL1_DMSO_200M_050219_2,14400,YAYDGKDYLAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14401 75.892 365.0 251180.0 25 0 40025.0 38772 TVDFYFEEV 9 106 574.7589706427858 1147.5033883523715 2 574.7599365115166 MULTI CID FTMS 0 0 0 14394 267067.875 0.5737194133518188 12 -1.1718826293945312 7 Unmodified _TVDFYFEEV_ ENSG00000196353|ENST00000429747|CPNE4;nc|ENSG00000196353|Q96A23-2|CPNE4 23.1484247019978 0.2366544122328345 4 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S][HA]EV 10 5 + 48.702 0.0 0.0 4.2441 4.2441 80.891 0.0 0.0 0.0 26.22749665273425 6.478174818886373 6.478174818886373 13.222192947339195 0 0.3807196863200844 2.0 1.0 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S][HA]EV;{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S][HA]D{I|L};{[QN]|[E{I|L}]|[KN]}[DP][C(Carbamidomethyl (C))S]E[W{I|L}] 4.2441;3.0919;0.035174 -;-;- 131 + 1 1.166 78212.3 1.0 9533 4866 14394 HBL1_DMSO_200M_050219_2,14401 HBL1_DMSO_200M_050219_2,14401,TVDFYFEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14402 75.9 452.0 354310.0 25 0 30138.0 + 28590 PTVSAVPIQ 9 140 456.26355474428544 910.5125565553708 2 456.2635375857353 MULTI CID FTMS 0 0 0 14394 251090.03125 0.524500475256038 2 -0.235321044921875 8 Unmodified _PTVSAVPIQ_ REV__ENSG00000117523|ENST00000647382|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-3|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-4|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-5|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-6|PRRC2C;REV__nc|ENSG00000117523|Q9Y520|PRRC2C 54.773552608820026 0.0299037012502309 4 {[VA]|[{I|L}G]}DVPQ 6 -1 46.406 0.0 0.0 5.0967 0.0 0.0 0.0 298.17639415634693 298.17639415634693 8.154462754693569 0.0 0.0 0.0 0 0.3252574989159953 2.0 1.1549471895720984 0.0 {[VA]|[{I|L}G]}DVPQ 5.0967 - 810 1 1.166 124310.7 1.0 9534 4866 14394 HBL1_DMSO_200M_050219_2,14402 HBL1_DMSO_200M_050219_2,14402,PTVSAVPIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14403 75.903 155.0 593100.0 25 0 59524.0 27918 PLTEINKIL 9 141 520.8214010947083 1039.6282492562166 2 520.8217040896416 MULTI CID FTMS 0 0 0 14394 205169.96875 0.9874880172619112 -1 0.0460128784179687 9 Unmodified _PLTEINKIL_ ENSG00000132664|ENST00000377603|POLR3F;ENST00000462997.5_1_20:18448220-18464199:+|nuORF 47.74868867922204 0.0453060283459952 4 {I|L}P{I|L}TE{I|L}NK{I|L} 9 2 + 95.06 0.0 0.0 9.1436 9.1436 91.775 0.0 0.0 0.0 36.47817481888637 13.667505541063178 13.667505541063178 8.416375079047498 0 1.3494850021680094 2.0 0.4247425010840047 0.3494850021680094 {I|L}P{I|L}TE{I|L}NK{I|L};{I|L}P{I|L}TE{I|L}[KG]G{I|L};{I|L}P{I|L}TE{I|L}GGK{I|L};{I|L}P{I|L}TE{I|L}[KQ]V;{I|L}P{I|L}TE{I|L}[KG]AV;{I|L}P{I|L}{I|L}{[ET]|[MV]}NK{I|L};{I|L}P{I|L}{I|L}{[ET]|[MV]}[KG]G{I|L};{I|L}P{I|L}{I|L}{[ET]|[MV]}GGK{I|L};{I|L}P{I|L}T{[VA]|[{I|L}G]}{[DA]|[EG]}K{I|L};{I|L}P{I|L}T[RV][WR] 9.1436;8.3341;8.2579;7.829;7.7849;6.5229;5.7134;5.6372;5.5728;5.5674 -;-;-;-;-;-;-;-;-;- 1677 + 1 1.166 78006.4 1.0 9535 4866 14394 HBL1_DMSO_200M_050219_2,14403 HBL1_DMSO_200M_050219_2,14403,PLTEINKIL True True LPLTEINKI 75.902741 520.821704089642 1950302.125 14394.0 ENST00000462997.5_1_20:18448220-18464199:+|nuORF;;ENSG00000132664|ENST00000377603|POLR3F 3.710212071736654 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14404 75.917 800.0 407650.0 25 0 31893.0 -1 0 154 629.3826978253124 628.3754213587124 1 629.3841430544853 MULTI CID FTMS 0 0 0 14394 167673.421875 0.2708678930079926 -11 0.981903076171875 10 4 [TP]{I|L}EA 5 -1 24.239 0.0 0.0 3.8574 0.0 0.0 0.0 114.08767321679387 114.08767321679387 6.007406826749325 0.0 0.0 0.0 0 0.0 1.0 1.1307196863200843 0.0 [TP]{I|L}EA 3.8574 - 285 1 1.166 236730.9 0.9100000262260436 9536 4866 14394 HBL1_DMSO_200M_050219_2,14404 HBL1_DMSO_200M_050219_2,14404, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14405 75.93 800.0 177040.0 25 0 10919.0 + 31563 RQLGSKYILGI 11 141 416.5873155360844 1246.7401172084533 3 416.9215270876884 MULTI CID FTMS 0 0 0 14394 168209.5625 1.0 0 0.0 11 Unmodified _RQLGSKYILGI_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 26.120906184454547 0.478875788770541 4 G{I|L}{I|L}[{M(Oxidation (M))|F}V]AA{I|L}{[RE]|[WV]} 10 9 36.588 0.0 0.0 2.9347 0.0 0.0 159.08946842773008 0.0 159.08946842773008 0.0 -2.628611649257671 -2.628611649257671 0.0 0 0.0 0.0 0.8945990182825423 1.3996498648046138 G{I|L}{I|L}[{M(Oxidation (M))|F}V]AA{I|L}{[RE]|[WV]} 2.9347 - 933 + 1 1.166 123603.6 0.6600000262260437 9537 4866 14394 HBL1_DMSO_200M_050219_2,14405 HBL1_DMSO_200M_050219_2,14405,RQLGSKYILGI False True RQLGSKYILGI 75.9304 416.921527087688 1428038.75 14394.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 4.07768448193868 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14406 75.938 431.0 217600.0 25 0 15811.0 + 28797 PYNQMMVAPM 10 131 394.5087986719687 1180.504566616106 3 394.5086852908134 MULTI CID FTMS 0 0 0 14394 160002.0625 0.8400862324275341 2 -0.235321044921875 12 Unmodified _PYNQMMVAPM_ REV__ENSG00000180357|ENST00000326648|ZNF609 11.640296217721598 0.652229146672156 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}YA 6 -1 34.614 0.0 0.0 2.9322 0.0 0.0 0.0 433.1189683391205 433.1189683391205 8.443350238481031 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}YA 2.9322 - 386 1 1.166 79929.9 1.0 9538 4866 14394 HBL1_DMSO_200M_050219_2,14406 HBL1_DMSO_200M_050219_2,14406,PYNQMMVAPM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14407 75.945 395.0 292530.0 25 0 30410.0 30758 RHQLKRLE 8 147 360.5540529307536 1078.640329392461 3 360.5538818240166 MULTI CID FTMS 0 0 0 14394 156093.21875 0.5071457536780122 7 -0.7222747802734375 13 Unmodified _RHQLKRLE_ ENSG00000134255|ENST00000357172|CEPT1;ENST00000480324.5_1_1:111690336-111702181:+|nuORF 7.289230182591677 0.7800870086367542 4 {M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{I|L}{M(Oxidation (M))|F}VR 8 7 + 39.322 0.0 0.0 3.6455 3.6455 66.137 0.0 0.0 0.0 28.608375596202578 6.173362959118407 6.173362959118407 1.7609125905568137 0 0.9247425010840048 0.0 0.0 0.0 {M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{I|L}{M(Oxidation (M))|F}VR;{M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}{I|L}VR;{M(Oxidation (M))|F}{[RE]|[WV]}{M(Oxidation (M))|F}{I|L}{I|L}VR;{M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}[RV]{I|L};{M(Oxidation (M))|F}{[RE]|[WV]}{M(Oxidation (M))|F}{I|L}[RV]{I|L} 3.6455;3.4822;2.6461;2.5337;1.6976 -;-;-;-;- 106 + 1 1.166 96791.0 1.0 9539 4866 14394 HBL1_DMSO_200M_050219_2,14407 HBL1_DMSO_200M_050219_2,14407,RHQLKRLE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14408 75.953 369.0 267130.0 25 0 28797.0 21688 LPLPTRPL 8 104 453.7924634572879 0 453.7925903201103 PEAK CID FTMS 0 0 0 14394 151484.0 0.0046706588007959 32 -3.263153076171875 14 Unmodified _LPLPTRPL_ chr17:42063058-42098410|20|20.0|0.19|6.75|-|ENST00000436535|ZNF385C,ZNF385C;ENSG00000187595|ENST00000692273|ZNF385C;nc|ENSG00000187595|Q66K41|ZNF385C 32.30548876998284 0.2094692153732555 4 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 6 4 19.893 0.0 0.0 2.1968 0.0 0.0 113.08335342843856 66.03571497134999 179.11906839978857 0.0 0.0 0.0 0.0 0 0.5451140161145328 0.0 0.0 0.3807196863200844 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 2.1968 - 82 + 1 1.166 79525.4 1.0 9540 4866 14394 HBL1_DMSO_200M_050219_2,14408 HBL1_DMSO_200M_050219_2,14408,LPLPTRPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14409 75.956 149.0 711210.0 25 0 112880.0 + 10687 FVVDHVIKI 9 101 357.21849470911866 1068.633654727556 3 357.2187377810478 MULTI CID FTMS 0 0 0 14394 160383.3125 0.3376979340629608 -1 0.0460128784179687 15 Unmodified _FVVDHVIKI_ ENSG00000090686|ENST00000308271|USP48;ENST00000464577.1_1_1:22028060-22030944:-|nuORF;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48 29.43715596616401 0.1566398223704148 4 {M(Oxidation (M))|F}VVDHV{I|L}K{I|L} 9 0 + 53.438 0.0 0.0 5.0006 5.0006 73.072 0.0 0.0 0.0 9.339129129973756 3.010299956639805 3.010299956639805 3.010299956639805 0 0.6139829889124311 0.0 0.3494850021680094 0.1643943297944484 + + {M(Oxidation (M))|F}VVDHV{I|L}K{I|L};{M(Oxidation (M))|F}VVDHV{I|L}{I|L}K;{M(Oxidation (M))|F}VVD{I|L}[HV]K{I|L};{M(Oxidation (M))|F}VVD{I|L}[HV]{I|L}K;{M(Oxidation (M))|F}VV{I|L}D[HV]K{I|L};{M(Oxidation (M))|F}VV{I|L}D[HV]{I|L}K;{M(Oxidation (M))|F}VV{I|L}[RP]PE{I|L};{M(Oxidation (M))|F}V{I|L}VD[HV]K{I|L};{M(Oxidation (M))|F}V{I|L}VD[HV]{I|L}K;{M(Oxidation (M))|F}V{I|L}V[RP]PE{I|L} 5.0006;4.7189;4.1978;3.9161;3.7513;3.4696;3.333;3.1426;2.8609;2.7243 +;-;-;-;-;-;-;-;-;- + 285 + 1 1.166 93831.5 1.0 9541 4866 14394 HBL1_DMSO_200M_050219_2,14409 HBL1_DMSO_200M_050219_2,14409,FVVDHVIKI False True FVVDHVIKI 75.956212 357.218737781048 6780214.0 14394.0 nc|ENSG00000090686|Q86UV5-8|USP48;;ENSG00000090686|ENST00000308271|USP48;;ENST00000464577.1_1_1:22028060-22030944:-|nuORF;;nc|ENSG00000090686|Q86UV5-2|USP48;;nc|ENSG00000090686|Q86UV5-5|USP48 4.026690721511841 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14410 75.97 800.0 300290.0 25 0 27727.0 + 31523 RQIDVHIFNAV 11 183 656.3609829059233 1310.7074128786464 2 656.3616210818291 MULTI CID FTMS 0 0 0 14394 132886.8125 0.7339961380597885 -1 0.0460128784179687 16 Unmodified _RQIDVHIFNAV_ ENSG00000124702|ENST00000326974|KLHDC3;ENST00000244670.12_1_6:42984918-42985899:+|nuORF 36.39500950444726 0.267929034476522 4 {[QG]|[NA]}[KA]QVH{I|L}{M(Oxidation (M))|F}NAV 12 4 + 72.984 0.0 0.0 5.5683 5.5683 70.18 0.0 0.0 0.0 0.0145139491456092 16.611814434466183 0.0145139491456092 0.0145139491456092 0 1.0400990676322908 0.7958800173440752 0.0 0.5572869970894639 {[QG]|[NA]}[KA]QVH{I|L}{M(Oxidation (M))|F}NAV;{[TV]|[{I|L}S]}S{M(Oxidation (M))|F}SVK{I|L}{M(Oxidation (M))|F}NAV;[{M(Oxidation (M))|F}T]WSVK{I|L}{M(Oxidation (M))|F}NAV;{NN|[MP]|[D{I|L}]|[EV]}RQVH{I|L}{M(Oxidation (M))|F}NAV;{[MG]|[TS]}V{M(Oxidation (M))|F}SVK{I|L}{M(Oxidation (M))|F}NAV;{[MG]|[TS]}PVQVH{I|L}{M(Oxidation (M))|F}NAV;{NN|[MP]|[D{I|L}]|[EV]}GVQVH{I|L}{M(Oxidation (M))|F}NAV;{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}[R{M(Oxidation (M))|F}]{I|L}{M(Oxidation (M))|F}NAV;{[MG]|[TS]}W{M(Oxidation (M))|F}VK{I|L}{M(Oxidation (M))|F}NAV;{[TV]|[{I|L}S]}S[QP]VH{I|L}{M(Oxidation (M))|F}NAV 5.5683;5.5672;5.4865;5.454;5.3005;5.1975;5.1955;5.186;5.133;5.1137 -;-;-;-;-;-;-;-;-;- 2970 1 1.166 173628.1 0.7200000286102295 9542 4866 14394 HBL1_DMSO_200M_050219_2,14410 HBL1_DMSO_200M_050219_2,14410,RQIDVHIFNAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14411 75.972 107.0 346750.0 25 0 25275.0 + 11653 GLAWHPPPGL 10 81 522.7866207075947 1043.5586884819893 2 523.7849609255791 MULTI CID FTMS 0 0 0 14394 145776.0 0.4000801389807529 -9 0.793975830078125 17 Unmodified _GLAWHPPPGL_ REV__ENST00000570950.1_1_16:2906057-2907066:-|nuORF 12.531546534597751 0.6372748319968624 4 {I|L} 1 -1 12.218 0.0 0.0 1.1708 0.0 0.0 912.4636852855034 0.0 912.4636852855034 0.0 1.3810320596947443 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1708 + + 54 + 1 1.166 37500.4 1.0 9543 4866 14394 HBL1_DMSO_200M_050219_2,14411 HBL1_DMSO_200M_050219_2,14411,GLAWHPPPGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14412 75.979 381.0 366790.0 25 0 34796.0 + 37111 TGVLPRLV 8 128 427.7764388341945 853.538324735189 2 427.7762634158134 MULTI CID FTMS 0 0 0 14394 133009.625 0.5173904645370669 -3 0.27264404296875 18 Unmodified _TGVLPRLV_ ENSG00000185467|ENST00000327442|KPNA7 30.22481116460888 0.4082965392918993 4 {[SA]|[TG]}VV{I|L}{I|L}[RP] 8 4 + 67.488 0.0 0.0 7.9069 7.9069 90.724 0.0 0.0 0.0 22.21848749616356 9.51544993495972 9.51544993495972 9.150129845764129 0 1.4876954943324543 1.5228787452803376 0.0 0.6747425010840047 {[SA]|[TG]}VV{I|L}{I|L}[RP];{[SA]|[TG]}V{I|L}V{I|L}[RP];{[SA]|[TG]}VV{I|L}[RP]{I|L};{[SA]|[TG]}V{I|L}V[RP]{I|L};{[SA]|[TG]}{I|L}VV{I|L}[RP];{[SA]|[TG]}{I|L}VV[RP]{I|L};{[SA]|[TG]}V{I|L}[RP]{I|L}V;{[SA]|[TG]}V{I|L}[RP]V{I|L};{[SA]|[TG]}V{I|L}{I|L}V[RP];{[SA]|[TG]}{I|L}V[RP]{I|L}V 7.9069;6.8348;6.792;5.72;5.2224;4.517;4.2853;4.139;3.4964;3.0823 -;-;-;-;-;-;+;-;-;- + 255 + 1 1.166 114683.2 1.0 9544 4866 14394 HBL1_DMSO_200M_050219_2,14412 HBL1_DMSO_200M_050219_2,14412,TGVLPRLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14413 75.987 392.0 213030.0 25 0 11468.0 12022 GPYDGFYLSY 10 128 591.258560490341 1180.502568047482 2 591.2595703005791 MULTI CID FTMS 0 0 0 14394 122987.4765625 0.4575117394633129 2 -0.235321044921875 19 Unmodified _GPYDGFYLSY_ ENSG00000064932|ENST00000361757|SBNO2;ENST00000587673.5_1_19:1109414-1111598:-|nuORF;nc|ENSG00000064932|Q9Y2G9-3|SBNO2 10.823927491677226 0.6659270209832991 4 [H{I|L}]GVA{I|L} 6 8 34.614 0.0 0.0 2.9322 0.0 0.0 0.0 587.1209511864068 587.1209511864068 9.156687756324686 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [H{I|L}]GVA{I|L} 2.9322 - 677 1 1.166 67417.3 1.0 9545 4866 14394 HBL1_DMSO_200M_050219_2,14413 HBL1_DMSO_200M_050219_2,14413,GPYDGFYLSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14414 75.99 154.0 487740.0 25 0 51367.0 + 33778 SLAVPWGQA 9 96 464.7481210224937 927.4816891117872 2 464.7484313845634 MULTI CID FTMS 0 0 0 14394 121801.03125 1.0 0 0.0 20 Unmodified _SLAVPWGQA_ REV__ENSG00000108654|ENST00000225792|DDX5;REV__ENST00000581230.5_1_17:62498125-62502378:-|nuORF;REV__ENST00000583562.1_1_17:62500076-62500226:-|nuORF 21.74664581756881 0.2544899275067181 4 {[TV]|[{I|L}S]}AV{I|L} 5 -1 36.101 0.0 0.0 3.8924 0.0 0.0 0.0 441.1534169772749 441.1534169772749 -0.1956114987640802 0.0 -0.1956114987640802 0.0 0 0.0 2.0 0.7059771852360797 0.0 {[TV]|[{I|L}S]}AV{I|L} 3.8924 - 402 1 1.166 61937.1 1.0 9546 4866 14394 HBL1_DMSO_200M_050219_2,14414 HBL1_DMSO_200M_050219_2,14414,SLAVPWGQA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14416 75.995 32.0 1318800.0 25 0 286280.0 39607 VDLLGIRLHW 10 61 611.3562878849376 1220.6980228366751 2 611.3563110232353 MULTI CID FTMS 0 0 0 14415 1513500.375 0.5884630649120091 -5 0.4484024047851562 1 Unmodified _VDLLGIRLHW_ ENSG00000132681|ENST00000368081|ATP1A4;ENST00000418334.5_1_1:160144048-160152563:+|nuORF;ENST00000466526.1_1_1:160147295-160152563:+|nuORF;nc|ENSG00000132681|Q13733-2|ATP1A4 1.6526216038709556 0.7189921496796233 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.179 38318.4 1.0 9547 4867 14415 HBL1_DMSO_200M_050219_2,14416 HBL1_DMSO_200M_050219_2,14416,VDLLGIRLHW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14417 76.009 787.0 341700.0 25 0 42338.0 + 9662 FLPRKFPSL 9 194 368.8907417095448 1103.6503957288344 3 368.8906432986259 MULTI CID FTMS 0 0 0 14415 199239.328125 0.3013541955089959 3 -0.2591400146484375 2 Unmodified _FLPRKFPSL_ ENSG00000261236|ENST00000569669|BOP1;nc|ENSG00000261236|Q14137-2|BOP1 40.23920728925047 0.0741434193262949 4 [RP]K{M(Oxidation (M))|F}PS{I|L}{I|L}{M(Oxidation (M))|F} 9 4 + 43.488 0.0 0.0 3.9403 3.9403 70.246 0.0 0.0 0.0 5.434983699752664 13.48242770799557 5.434983699752664 3.406206186877938 0 0.0 0.0 0.3807196863200844 0.430884548956689 [RP]K{M(Oxidation (M))|F}PS{I|L}{I|L}{M(Oxidation (M))|F};[RP]K{M(Oxidation (M))|F}SP{I|L}{I|L}{M(Oxidation (M))|F};[RP]K{I|L}MS{I|L}{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]PS{I|L}{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]SP{I|L}{I|L}{M(Oxidation (M))|F};[RP]K{M(Oxidation (M))|F}S{I|L}P{I|L}{M(Oxidation (M))|F};[RP]K{M(Oxidation (M))|F}{I|L}SP{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KK{[ET]|[MV]}{I|L}{I|L}E;[R{I|L}][KP]MS{I|L}{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RK]{I|L}SP{I|L}{M(Oxidation (M))|F} 3.9403;3.6317;3.0701;2.9975;2.6889;2.4685;2.4205;2.2122;2.0551;1.7393 -;-;-;-;-;-;-;-;-;- 849 1 1.179 215614.7 1.0 9548 4867 14415 HBL1_DMSO_200M_050219_2,14417 HBL1_DMSO_200M_050219_2,14417,FLPRKFPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14418 76.01 18.0 2762400.0 25 0 242370.0 + 21691 LPLQENVTI 9 81 513.7940928524608 1025.5736327717216 2 513.7956420779228 MULTI CID FTMS 0 0 0 14415 2377524.25 0.7943838884886846 -2 0.1710433959960937 3 Unmodified _LPLQENVTI_ ENSG00000142945|ENST00000372224|KIF2C;ENST00000480574.1_1_1:45212428-45216012:+|nuORF;ENST00000493027.5_1_1:45205556-45221765:+|nuORF;nc|ENSG00000142945|Q99661-2|KIF2C 36.12702656103203 0.0967173616627612 4 [{I|L}P]QEN{I|L}V[{I|L}T] 9 2 + 53.394 0.0 0.0 5.2063 5.2063 71.766 0.0 0.0 0.0 17.147642715192504 32.587418566968154 17.147642715192504 1.7339374311232802 0 0.5 1.3010299956639813 0.0 0.7302046884880937 [{I|L}P]QEN{I|L}V[{I|L}T];[{I|L}P]QE{I|L}NV[{I|L}T];[{I|L}P]Q{I|L}ENV[{I|L}T];[{I|L}P]QEN{I|L}S{I|L}{I|L};[{I|L}P]QENV{I|L}[{I|L}T];[{I|L}P]Q{I|L}ENS{I|L}{I|L};[{I|L}P]QE{I|L}NS{I|L}{I|L};[{I|L}P]QEGG{I|L}V[{I|L}T];[{I|L}P][AG]EN{I|L}V[{I|L}T];[{I|L}P][AG]{I|L}ENV[{I|L}T] 5.2063;5.0372;5.0372;4.5639;4.5416;4.3948;4.3948;4.3084;4.3084;4.1394 -;-;-;-;-;-;-;-;-;- 417 1 1.179 43061.3 1.0 9549 4867 14415 HBL1_DMSO_200M_050219_2,14418 HBL1_DMSO_200M_050219_2,14418,LPLQENVTI True True LPLQENVTI 76.009951 513.795642077923 79147768.0 14415.0 ENSG00000142945|ENST00000372224|KIF2C;;nc|ENSG00000142945|Q99661-2|KIF2C;;ENST00000493027.5_1_1:45205556-45221765:+|nuORF;;ENST00000480574.1_1_1:45212428-45216012:+|nuORF 4.29635755221049 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14419 76.011 17.0 2893600.0 25 0 578080.0 + 15840 SIIDTELKV 9 70 509.2922574577804 1016.5699619823608 2 509.2945739626884 MULTI CID FTMS 0 0 0 14415 2115337.25 1.0 0 0.0 4 Unmodified _ISLDRCLVV_ nc|ENSG00000071539|Q15645-2|TRIP13;ENST00000512024.5_1_5:893053-908577:+|nuORF;ENSG00000071539|ENST00000166345|TRIP13 17.11289562659939 0.3734572693229295 4 {I|L}S{I|L}D{[ET]|[MV]}{I|L}KV 9 3 + 64.2 0.0 0.0 6.3154 6.3154 90.802 0.0 0.0 0.0 36.485035937262566 10.968878562567523 10.968878562567523 22.73001272063737 0 0.0 2.0 0.0 0.0 {I|L}S{I|L}D{[ET]|[MV]}{I|L}KV;{I|L}S{I|L}HH[PS]KV;{I|L}P{[MS]|[{M(Oxidation (M))|F}A]}{[ET]|[MV]}{I|L}KV;{I|L}PY[DV][PS]KV;{I|L}[WE]{[ET]|[MV]}{I|L}KV 6.3154;4.0794;3.359;2.6714;2.1624 -;-;-;-;- 166 + 1 1.179 48304.5 1.0 9550 4867 14415 HBL1_DMSO_200M_050219_2,14419 HBL1_DMSO_200M_050219_2,14419,ISLDRCLVV False False SIIDTELKV 76.01113 509.294573962688 14448560.0 14415.0 nc|ENSG00000071539|Q15645-2|TRIP13;;ENST00000512024.5_1_5:893053-908577:+|nuORF;;ENSG00000071539|ENST00000166345|TRIP13 4.589210510253906 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14420 76.012 23.0 2826100.0 25 0 513520.0 + 2564 ASFNDTFVHV 10 78 568.7721235806049 1135.5296942280097 2 568.7726318240166 MULTI CID FTMS 0 0 0 14415 2046515.5 0.0920682488459277 -3 0.2270126342773437 5 Unmodified _ASFNDTFVHV_ ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF 56.17704186161178 0.0466144807663799 4 {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}VVH 10 2 + 84.584 0.0 0.0 7.4489 7.4489 93.081 0.0 0.0 0.0 64.53457336521869 11.325161711962323 11.325161711962323 13.411964496339309 0 0.5796896906561032 1.6989700043360187 0.3807196863200844 0.4247425010840047 {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}VVH;{[SA]|[TG]}{M(Oxidation (M))|F}GGDT{M(Oxidation (M))|F}VVH;{[ES]|[DT]|[{I|L}C]}[RK]TDN{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDN{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}EKKDN{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TKKDN{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}[RK]TDGG{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDGG{[WT]|[RM]};[HV]{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}[KC]{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}EKKDGG{[WT]|[RM]} 7.4489;6.2677;2.4579;2.3725;1.8423;1.757;1.647;1.5616;1.1605;1.0314 -;-;-;-;-;-;-;-;-;- 221 + 1 1.179 57011.6 1.0 9551 4867 14415 HBL1_DMSO_200M_050219_2,14420 HBL1_DMSO_200M_050219_2,14420,ASFNDTFVHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14421 76.014 47.0 1148800.0 25 0 71590.0 + 24202 MAFLTQRTI 9 93 540.7978122586466 1079.581071584093 2 540.7985107302666 MULTI CID FTMS 0 0 0 14415 461694.0 1.0 0 0.0 6 Unmodified _MAFLTQRTI_ ENSG00000183495|ENST00000389561|EP400;nc|ENSG00000183495|Q96L91-3|EP400;nc|ENSG00000183495|Q96L91-4|EP400;nc|ENSG00000183495|Q96L91-5|EP400;nc|ENSG00000183495|Q96L91|EP400 29.84058131909904 0.1515068451768857 4 MA{M(Oxidation (M))|F}{I|L}T 5 4 63.857 0.0 0.0 5.9149 0.0 0.0 0.0 513.2783297174436 513.2783297174436 53.57901658743755 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.3807196863200844 0.0 + MA{M(Oxidation (M))|F}{I|L}T 5.9149 + + 105 + 1 1.179 46749.4 1.0 9552 4867 14415 HBL1_DMSO_200M_050219_2,14421 HBL1_DMSO_200M_050219_2,14421,MAFLTQRTI False True MAFLTQRTI 76.013584 540.798510730267 5690691.5 14415.0 nc|ENSG00000183495|Q96L91-4|EP400;;nc|ENSG00000183495|Q96L91-3|EP400;;nc|ENSG00000183495|Q96L91|EP400;;nc|ENSG00000183495|Q96L91-5|EP400;;ENSG00000183495|ENST00000389561|EP400 5.204562505086263 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14422 76.016 140.0 700720.0 25 0 73321.0 + + 23049 VTITGIVKV 9 112 465.30488366520217 928.5952143972044 2 465.3051635622978 MULTI CID FTMS 0 0 0 14415 425574.71875 0.5151634448880972 -2 0.1710433959960937 7 Unmodified _LSLATALKL_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8 41.8396318013385 0.0653578398400075 4 VT{I|L}TAVVKV 9 -1 + 78.368 0.0 0.0 8.4394 8.4394 84.59 0.0 0.0 0.0 42.38496122773413 12.587418566968154 12.587418566968154 3.0102999566398125 0 0.5924778212679485 2.0 0.3807196863200844 0.1803115997617927 VT{I|L}TAVVKV;{I|L}S{I|L}TAVVKV 8.4394;8.1152 -;- 641 + 1 1.179 80750.4 1.0 9553 4867 14415 HBL1_DMSO_200M_050219_2,14422 HBL1_DMSO_200M_050219_2,14422,LSLATALKL False False VTITGIVKV 76.016393 465.305163562298 6259080.5 14415.0 ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;nc|ENSG00000125885|Q9UJA3-2|MCM8 4.899740537007649 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14423 76.02 210.0 318980.0 25 0 80993.0 + + 39378 HGLVIAVV 8 95 404.25787464597727 806.5011963587546 2 404.2579833865166 MULTI CID FTMS 0 0 0 14415 342708.875 1.0 0 0.0 8 Unmodified _VAHVLAVV_ ENSG00000263961|ENST00000331555|RHEX 32.45364647766026 0.3613649037604678 4 {[VA]|[{I|L}G]}HV{I|L}AVV 8 -1 + 43.254 0.0 0.0 5.3632 5.3632 74.181 0.0 0.0 0.0 2.6760624017703094 10.172203223519531 2.6760624017703094 2.6760624017703094 0 0.8182503180159344 1.0457574905606752 0.0 0.0 {[VA]|[{I|L}G]}HV{I|L}AVV;{[HG]|PP}{I|L}V{I|L}AVV;{[VA]|[{I|L}G]}HVA{I|L}VV;{[HG]|PP}{I|L}VA{I|L}VV;{[VA]|[{I|L}G]}H{I|L}VAVV;{[VA]|[{I|L}G]}HAV{I|L}VV;{[HG]|PP}{I|L}{I|L}VAVV;{[VA]|[{I|L}G]}H{I|L}G{I|L}VV;{[HG]|PP}{I|L}AV{I|L}VV;{[HG]|PP}{I|L}{I|L}G{I|L}VV 5.3632;5.0314;4.99;4.6581;4.072;3.9421;3.7401;3.6987;3.6103;3.3669 +;-;-;-;-;-;-;-;-;- + 151 1 1.179 57251.4 1.0 9554 4867 14415 HBL1_DMSO_200M_050219_2,14423 HBL1_DMSO_200M_050219_2,14423,VAHVLAVV False False HGLVIAVV 76.02037 404.257983386517 2399718.75 14415.0 ENSG00000263961|ENST00000331555|RHEX 5.165477752685547 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14424 76.026 312.0 200890.0 25 0 19787.0 + 23537 LTLHVVQGANR 11 103 604.3481425083728 1206.6817320835455 2 604.3491699099541 MULTI CID FTMS 0 0 0 14415 344463.09375 0.4201603672070559 -2 0.1710433959960937 9 Unmodified _LTLHVVQGANR_ REV__ENSG00000132849|ENST00000642238|PATJ;REV__ENST00000459752.5_1_1:62228564-62579919:+|nuORF;REV__ENST00000484562.5_1_1:62228564-62579919:+|nuORF;REV__nc|ENSG00000132849|Q8NI35-2|PATJ;REV__nc|ENSG00000132849|Q8NI35-3|PATJ;REV__nc|ENSG00000132849|Q8NI35-4|PATJ;REV__nc|ENSG00000132849|Q8NI35|PATJ 2.735195868890462 0.8622431031272658 4 V 1 -1 10.379 0.0 0.0 0.86009 0.0 0.0 1089.602132634618 0.0 1089.602132634618 0.0 -10.590496560389973 -10.590496560389973 0.0 0 0.0 0.0 0.0 0.0 V 0.86009 + + 84 + 1 1.179 49550.0 1.0 9555 4867 14415 HBL1_DMSO_200M_050219_2,14424 HBL1_DMSO_200M_050219_2,14424,LTLHVVQGANR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14425 76.04 800.0 187750.0 25 0 50130.0 -1 0 49 1170.8190595043643 3509.435349113294 3 1171.487597644329 MULTI CID FTMS 0 0 0 14415 314359.53125 0.9927255100279584 -1 0.125030517578125 10 4 YG 2 -1 10.969 0.0 0.0 0.31256 0.0 0.0 1781.6107164002062 1504.7181339994384 3286.3288503996446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.31256 - 14 + 1 1.179 126213.0 0.9900000095367432 9556 4867 14415 HBL1_DMSO_200M_050219_2,14425 HBL1_DMSO_200M_050219_2,14425, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14426 76.041 63.0 826110.0 25 0 59601.0 + 41690 VPRWSPPSI 9 108 519.7918084598668 1037.5690639865336 2 519.7930175662041 MULTI CID FTMS 0 0 0 14415 298129.3125 1.0 0 0.0 11 Unmodified _VPRWSPPSI_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 26.020703789607367 0.2001090068861241 4 [{I|L}P]S[QT]VPP{[TV]|[{I|L}S]} 10 5 + 55.137 0.0 0.0 5.314 5.314 70.176 0.0 0.0 0.0 0.5650143553919307 2.597524836369381 0.5650143553919307 0.5650143553919307 0 1.0 1.6989700043360187 0.3252574989159953 0.0 [{I|L}P]S[QT]VPP{[TV]|[{I|L}S]};[{I|L}T]TPNPVP{[TV]|[{I|L}S]};[{I|L}T]TPNVPP{[TV]|[{I|L}S]};[{I|L}P][C(Carbamidomethyl (C))R]VPP{[TV]|[{I|L}S]};[{I|L}P]S[QT]PVP{[TV]|[{I|L}S]};[{I|L}T]TPGGPVP{[TV]|[{I|L}S]};[{I|L}T]TPGGVPP{[TV]|[{I|L}S]};[{I|L}P][C(Carbamidomethyl (C))R]PVP{[TV]|[{I|L}S]};RR[QA]NPPS{I|L};[TP][{I|L}T]NPVP{[TV]|[{I|L}S]} 5.314;5.2596;5.0445;4.8308;4.5654;4.3763;4.1612;4.0588;3.8612;3.7409 -;-;-;-;-;-;-;-;-;- 921 1 1.179 47937.4 1.0 9557 4867 14415 HBL1_DMSO_200M_050219_2,14426 HBL1_DMSO_200M_050219_2,14426,VPRWSPPSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14427 76.043 84.0 793750.0 25 0 51115.0 + 25201 RTIGVMTMV 9 101 503.77043923436906 1005.526325535538 2 504.2718688845634 MULTI CID FTMS 0 0 0 14415 296308.9375 0.178652182891389 -7 0.6319351196289062 12 Unmodified _MTLRAQTSV_ ENSG00000136628|ENST00000366923|EPRS1 12.531546534597751 0.4974689918368763 4 {I|L}{I|L}[MD]KGTM 8 8 25.468 0.0 0.0 2.5328 0.0 0.0 0.0 113.0573673658694 113.0573673658694 11.972893776096214 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5 0.0 {I|L}{I|L}[MD]KGTM 2.5328 - 266 1 1.179 58513.6 1.0 9558 4867 14415 HBL1_DMSO_200M_050219_2,14427 HBL1_DMSO_200M_050219_2,14427,MTLRAQTSV False False RTIGVMTMV 76.043365 504.271868884563 1882069.375 14415.0 ENSG00000136628|ENST00000366923|EPRS1 5.575784683227539 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14428 76.048 275.0 580620.0 25 0 40569.0 39973 VGARDLFMASC 11 137 593.2727069774936 1184.5308610217871 2 593.2739745974541 MULTI CID FTMS 0 0 0 14415 227223.578125 0.1834176071107308 -3 0.2270126342773437 13 Oxidation (M) _VGARDLFM(Oxidation (M))ASC_ nc|ENSG00000143951|O95876-2|WDPCP 41.95555342248728 0.1822715950200113 4 QD{I|L}{M(Oxidation (M))|F}CCCV 8 8 48.211 0.0 0.0 4.0701 0.0 0.0 255.1690846173844 0.0 255.1690846173844 0.0 23.51850649356642 0.0 0.0 0 0.5 0.0 0.7059771852360797 0.7302046884880937 QD{I|L}{M(Oxidation (M))|F}CCCV 4.0701 - 232 1 1.179 121423.3 1.0 9559 4867 14415 HBL1_DMSO_200M_050219_2,14428 HBL1_DMSO_200M_050219_2,14428,VGARDLFMASC False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 14429 76.063 800.0 219360.0 25 0 11958.0 + 12242 GQYEPHFDFA 10 205 605.7622755366425 1209.509998140085 2 605.7620727419853 MULTI CID FTMS 0 0 0 14415 171044.15625 0.4938624646740839 3 -0.2591400146484375 14 Unmodified _GQYEPHFDFA_ ENSG00000122884|ENST00000394890|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1 30.63653989081413 0.2803493085145199 4 {[QG]|[NA]}{[SA]|[TG]}{I|L}TTEYP 10 8 36.782 0.0 0.0 3.041 0.0 0.0 0.0 158.9775337852108 158.9775337852108 8.522193702651457 0.0 0.0 0.0 0 0.5 0.638272163982407 0.0 0.6549471895720984 {[QG]|[NA]}{[SA]|[TG]}{I|L}TTEYP 3.041 - 7928 1 1.179 125140.3 0.8999999761581421 9560 4867 14415 HBL1_DMSO_200M_050219_2,14429 HBL1_DMSO_200M_050219_2,14429,GQYEPHFDFA False True GQYEPHFDFA 76.063447 605.762072741985 7278555.0 14415.0 nc|ENSG00000122884|P13674-2|P4HA1;;ENSG00000122884|ENST00000394890|P4HA1 6.324070930480957 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14430 76.077 800.0 289270.0 25 0 30004.0 + -1 ADGVDHIDIY 10 223 580.2664743927413 1158.5183958522823 2 580.2666503787041 MULTI CID FTMS 0 0 0 14415 172382.015625 0.8329650627960031 1 -0.11029052734375 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADGVDHIDIY_ nc|ENSG00000111605|Q16630-3|CPSF6;ENSG00000111605|ENST00000435070|CPSF6;ENST00000550987.5_1_12:69633426-69648902:+|nuORF;nc|ENSG00000111605|Q16630-2|CPSF6 34.40172386719151 0.2166836008404837 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{[WT]|[RM]}{I|L}D{I|L}Y 9 -1 + 45.688 0.0 0.0 3.9436 3.9436 64.291 0.0 0.0 0.0 0.339322000954283 14.97302484056647 0.339322000954283 0.339322000954283 0 0.25 1.6989700043360187 0.2887254899964357 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{[WT]|[RM]}{I|L}D{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}MN{I|L}D{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{[WT]|[RM]}PM{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}MNPM{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}A{[WT]|[RM]}{I|L}D{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}YMN{I|L}D{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[KG]D{[QS]|[NT]}{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[QT]A{[QS]|[NT]}{I|L}Y;{[YD]|[{M(Oxidation (M))|F}M]}A{[WT]|[RM]}PM{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[QT]D{[QS]|[NT]}{I|L}Y 3.9436;3.9144;3.5318;3.5025;3.2278;3.1454;2.965;2.8928;2.816;2.813 -;-;-;-;-;-;-;-;-;- 9259 1 1.179 169559.3 0.8700000047683716 9561 4867 14415 HBL1_DMSO_200M_050219_2,14430 HBL1_DMSO_200M_050219_2,14430,ADGVDHIDIY False False ADGVDHIDIY 76.07728 580.266650378704 1888360.375 14415.0 nc|ENSG00000111605|Q16630-3|CPSF6;;ENSG00000111605|ENST00000435070|CPSF6;;ENST00000550987.5_1_12:69633426-69648902:+|nuORF;;nc|ENSG00000111605|Q16630-2|CPSF6 4.494895935058594 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14431 76.091 800.0 86703.0 25 0 22019.0 + 26648 NYFCRNEMS 9 47 1163.4621722170982 1162.4548957504985 1 1163.461352527142 MULTI CID FTMS 0 0 0 14415 113320.7421875 0.4349324353539329 6 -0.5972442626953125 16 Unmodified _NYFCRNEMS_ REV__ENSG00000113924|ENST00000283871|HGD 1.844237919475145 0.850302753031785 4 E 1 -1 6.9897 0.0 0.0 0.60129 0.0 0.0 506.2268816897545 524.1638277643186 1030.3907094540732 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.60129 + + 12 + 1 1.179 62899.2 0.6100000143051147 9562 4867 14415 HBL1_DMSO_200M_050219_2,14431 HBL1_DMSO_200M_050219_2,14431,NYFCRNEMS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14432 76.101 477.0 213950.0 25 0 30860.0 + 21401 KFISGILAA 9 134 460.28412420309024 918.5536954729804 2 460.2841674685478 MULTI CID FTMS 0 0 0 14415 108283.8203125 0.7637827553629943 -1 0.125030517578125 17 Unmodified _LPGALPLPAA_ nc|ENSG00000111231|Q9UHW5-3|GPN3;nc|ENSG00000111231|Q9UHW5-2|GPN3;ENSG00000111231|ENST00000228827|GPN3 24.67388899826682 0.4143206957119831 4 {[TV]|[{I|L}S]}G{I|L}{M(Oxidation (M))|F}K{I|L}AA 9 5 + 44.967 0.0 0.0 4.8954 4.8954 73.387 0.0 0.0 0.0 3.0509204984672 8.13512444988229 3.0509204984672 3.0509204984672 0 1.0074908058443608 0.7958800173440752 0.5731074559755159 0.0 {[TV]|[{I|L}S]}G{I|L}{M(Oxidation (M))|F}K{I|L}AA;{[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}K{I|L}AA;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F}K{I|L}AA;[{I|L}A][VS]{M(Oxidation (M))|F}K{I|L}AA;{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}K{I|L}{I|L}AA;{[VA]|[{I|L}G]}S{I|L}{M(Oxidation (M))|F}K{I|L}AA;[{I|L}A]GYK{I|L}{I|L}AA;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}K{I|L}{I|L}AA;[K{I|L}]E{M(Oxidation (M))|F}K{I|L}AA;{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{I|L}K{I|L}AA 4.8954;4.5633;4.5364;4.475;4.4317;4.2423;4.1766;4.0727;3.9264;3.9123 -;-;-;-;-;-;-;-;-;- 763 1 1.179 81760.1 1.0 9563 4867 14415 HBL1_DMSO_200M_050219_2,14432 HBL1_DMSO_200M_050219_2,14432,LPGALPLPAA False False KFISGILAA 76.100753 460.284167468548 1492690.0 14415.0 nc|ENSG00000111231|Q9UHW5-3|GPN3;;nc|ENSG00000111231|Q9UHW5-2|GPN3;;ENSG00000111231|ENST00000228827|GPN3 3.4745022455851235 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14434 76.105 19.0 2294500.0 25 0 249580.0 + 41010 VMAPRTVLL 9 68 500.3047063217554 998.5948597103109 2 500.3049499392509 MULTI CID FTMS 0 0 0 14433 1876395.875 0.06526432719301 4 -0.3355178833007812 1 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 29.84058131909904 0.1515068451768857 4 VMAP 4 5 55.433 0.0 0.0 5.5511 0.0 0.0 0.0 597.3731783502561 597.3731783502561 34.06295947543775 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + VMAP 5.5511 + + 26 + 1 1.193 40002.7 1.0 9564 4868 14433 HBL1_DMSO_200M_050219_2,14434 HBL1_DMSO_200M_050219_2,14434,VMAPRTVLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14435 76.107 18.0 2287900.0 25 0 196620.0 + 41459 VPLPAENVTI 10 64 526.8030293126947 1051.5915056921892 2 526.8035156130791 MULTI CID FTMS 0 0 0 14433 2600309.75 0.9355999800668984 1 -0.0466232299804687 2 Unmodified _VPLPAENVTI_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 29.081581746732265 0.3152867722954398 4 [VP]YYVVVT{I|L} 9 5 + 32.073 0.0 0.0 3.05 3.05 77.767 0.0 0.0 0.0 0.6471248870938311 16.588797561877307 0.6471248870938311 14.490925311194191 0 0.8182503180159344 1.154901959985743 0.0 0.0 [VP]YYVVVT{I|L};[VP]YYA{I|L}{I|L}T{I|L} 3.05;1.672 -;- 91 1 1.193 40433.3 1.0 9565 4868 14433 HBL1_DMSO_200M_050219_2,14435 HBL1_DMSO_200M_050219_2,14435,VPLPAENVTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14436 76.108 34.0 1457900.0 25 0 174370.0 + 17749 KQADPFASL 9 73 488.75928501726406 975.504017101328 2 488.7590515017509 MULTI CID FTMS 0 0 0 14433 1465841.875 0.6729586402565415 -2 0.235321044921875 3 Unmodified _KQADPFASL_ ENSG00000148110|ENST00000375344|MFSD14B;nc|ENSG00000148110|Q5SR56-2|MFSD14B 38.17557092003332 0.0854718145212029 4 {[TV]|[{I|L}S]}A[NG]P{M(Oxidation (M))|F}AS{I|L} 10 4 + 59.371 0.0 0.0 6.0862 6.0862 87.65 0.0 0.0 0.0 11.213044519532062 11.20506544868192 11.20506544868192 11.213044519532062 0 1.242992819099939 1.5228787452803376 0.3807196863200844 0.0 {[TV]|[{I|L}S]}A[NG]P{M(Oxidation (M))|F}AS{I|L};{[SA]|[TG]}{I|L}[NG]P{M(Oxidation (M))|F}AS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TP]P{M(Oxidation (M))|F}AS{I|L};{[TV]|[{I|L}S]}A[NG]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ADA[KG]AS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AD[KQ]AS{I|L};{[TV]|[{I|L}S]}[WD][KG]AS{I|L};{[TV]|[{I|L}S]}[HS][YV]AS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ADA[KQ]S{I|L};{[SA]|[TG]}{I|L}[NG]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L} 6.0862;4.9367;4.8518;3.8058;3.7163;3.5358;2.9236;2.9236;2.6884;2.6563 -;-;-;-;-;-;-;-;-;- 254 1 1.193 44288.8 1.0 9566 4868 14433 HBL1_DMSO_200M_050219_2,14436 HBL1_DMSO_200M_050219_2,14436,KQADPFASL True True KQADPFASL 76.107705 488.759051501751 43340580.0 14433.0 nc|ENSG00000148110|Q5SR56-2|MFSD14B;;ENSG00000148110|ENST00000375344|MFSD14B 5.423481623331706 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14437 76.109 43.0 1774500.0 25 0 434380.0 + 32262 RWPDYVREL 9 60 617.3224849501827 1232.6304169671653 2 617.3229858279228 MULTI CID FTMS 0 0 0 14433 1244530.75 0.4863323756397853 -9 0.8322830200195312 4 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 42.312485326615175 0.0627620958981271 4 [WR][DP]YVRE{I|L} 9 0 + 64.816 0.0 0.0 5.2584 5.2584 86.615 0.0 0.0 0.0 8.893390162334995 48.35016244829767 8.893390162334995 23.239087409443187 0 1.0 1.5228787452803376 0.0 0.8494850021680094 + + [WR][DP]YVRE{I|L};[WP][RD]YVRE{I|L};{I|L}{M(Oxidation (M))|F}[VG]VY[RD][HQ];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YVRE{I|L};[VG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VY[RD][HQ] 5.2584;3.373;3.3219;2.9498;1.4919 +;-;-;-;- + 123 1 1.193 61566.8 1.0 9567 4868 14433 HBL1_DMSO_200M_050219_2,14437 HBL1_DMSO_200M_050219_2,14437,RWPDYVREL True True RWPDYVREL 76.108921 617.322985827923 521468310.0 14433.0 nc|ENSG00000174953|Q9H2U1-2|DHX36;;ENSG00000174953|ENST00000496811|DHX36;;nc|ENSG00000174953|Q9H2U1-3|DHX36 9.552289168039955 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14438 76.11 37.0 1821900.0 25 0 167640.0 + 22598 LPYGLERAI 9 77 516.2970048672632 1030.5794568013264 2 516.2979003787041 MULTI CID FTMS 0 0 0 14433 964267.5625 0.6693946271516407 1 -0.0466232299804687 5 Unmodified _LPYGLERAI_ ENSG00000004478|ENST00000001008|FKBP4 31.26834338654808 0.1333407332142048 4 {I|L}PYG{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 9 0 + 67.872 0.0 0.0 6.5858 6.5858 91.812 0.0 0.0 0.0 41.21645960868548 4.181212380090216 4.181212380090216 22.460762528683706 0 0.7059771852360797 1.6989700043360187 0.0 0.0 + + {I|L}PYG{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{I|L}PY[W{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{I|L}[WM]{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 6.5858;4.4064;2.4119 +;-;- + 126 + 1 1.193 60027.3 1.0 9568 4868 14433 HBL1_DMSO_200M_050219_2,14438 HBL1_DMSO_200M_050219_2,14438,LPYGLERAI False True LPYGLERAI 76.1101 516.297900378704 13658129.0 14433.0 ENSG00000004478|ENST00000001008|FKBP4 5.150197982788086 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14439 76.112 83.0 858620.0 25 0 143870.0 + 2807 ATVPGLLKV 9 71 449.2918332694791 896.5691136057583 2 449.2921020388603 MULTI CID FTMS 0 0 0 14433 745673.6875 0.6548962290540206 1 -0.0466232299804687 6 Unmodified _ATVPGLLKV_ ENSG00000179820|ENST00000391770|MYADM 25.399314129420983 0.2080152500878129 4 [TA]VP{[VA]|[{I|L}G]}{I|L}KV 9 0 + 38.157 0.0 0.0 4.2559 4.2559 67.99 0.0 0.0 0.0 13.718448956404544 2.385049905740616 2.385049905740616 1.7609125905568064 0 0.3807196863200844 1.3979400086720375 0.0 0.25 + + [TA]VP{[VA]|[{I|L}G]}{I|L}KV;[TA]VV[PA]{I|L}KV 4.2559;4.0595 +;- + 76 + 1 1.193 60445.8 1.0 9569 4868 14433 HBL1_DMSO_200M_050219_2,14439 HBL1_DMSO_200M_050219_2,14439,ATVPGLLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14440 76.113 41.0 1261700.0 25 0 212590.0 + -1 MLHLVLQV 8 91 484.782636084376 967.550719235552 2 484.7828552126884 MULTI CID FTMS 0 0 0 14433 637233.5625 0.4515566350598394 -2 0.235321044921875 7 Oxidation (M) _M(Oxidation (M))LHLVLQV_ REV__ENSG00000166037|ENST00000325542|CEP57;REV__ENST00000539855.5_1_11:95532492-95564417:+|nuORF;REV__nc|ENSG00000166037|Q86XR8-2|CEP57;REV__nc|ENSG00000166037|Q86XR8-4|CEP57;REV__nc|ENSG00000166037|Q86XR8-5|CEP57 30.19836241096484 0.408853459428176 4 NV[HQ]N{I|L} 6 -1 33.689 0.0 0.0 3.4819 0.0 0.0 244.1887713976102 0.0 244.1887713976102 0.0 17.914478256039665 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.8807196863200843 NV[HQ]N{I|L} 3.4819 - 305 + 1 1.193 43570.1 1.0 9570 4868 14433 HBL1_DMSO_200M_050219_2,14440 HBL1_DMSO_200M_050219_2,14440,MLHLVLQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14441 76.115 56.0 626740.0 25 0 45247.0 + -1 PLMLLQVPM 9 72 537.2898621748571 0 537.2870971560478 PEAK CID FTMS 0 0 0 14433 527935.9375 0.4279110371992418 -10 0.9385986328125 8 2 Oxidation (M) _PLM(Oxidation (M))LLQVPM(Oxidation (M))_ REV__ENST00000344692.7_1_8:144356972-144357419:+|nuORF 26.34127834903884 0.1435854383732919 4 P{I|L}PY 4 -1 25.477 0.0 0.0 2.3754 0.0 0.0 392.1772452463954 207.1142977350219 599.2915429814174 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 P{I|L}PY 2.3754 - 111 + 1 1.193 39439.1 1.0 9571 4868 14433 HBL1_DMSO_200M_050219_2,14441 HBL1_DMSO_200M_050219_2,14441,PLMLLQVPM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14442 76.116 57.0 979290.0 25 0 141660.0 + 44499 YPASPWSHI 9 86 529.259293245193 1056.504033557186 2 529.2592651247978 MULTI CID FTMS 0 0 0 14433 485623.28125 0.8478713225770055 4 -0.3355178833007812 9 Unmodified _YPASPWSHI_ ENSG00000105287|ENST00000291281|PRKD2;ENST00000597589.5_1_19:47177782-47200527:-|nuORF;ENST00000599019.5_1_19:47177782-47200527:-|nuORF;nc|ENSG00000105287|Q9BZL6-2|PRKD2;nc|ENSG00000105287|Q9BZL6-3|PRKD2 67.34385681178166 0.0221257235307089 4 YPAS[WP]SH{I|L} 9 0 + 70.895 0.0 0.0 6.7103 6.7103 89.938 0.0 0.0 0.0 54.69714818727224 6.4825413041745605 6.4825413041745605 10.96910013008057 0 1.048455006504028 1.5228787452803376 0.2742275032520141 0.0 + + YPAS[WP]SH{I|L};YPAS[WP][HT]V;YPAS[YR]{[DS]|[MA]|[CV]|TT}V;YPAS[YR]{[MG]|[TS]}{I|L};[YR][YR]SA{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AS{I|L}{I|L}{[CP]|[EA]}{[HG]|PP};[PA]YS{I|L}{I|L}{[CP]|[EA]}{[HG]|PP};[DP]{[CP]|[EA]}{I|L}{I|L}SCP{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVV[WE]{[HG]|PP};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVV{[{M(Oxidation (M))|F}C]|[YS]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 6.7103;5.6721;5.5338;5.5338;2.6443;2.2777;1.4561;1.437;1.3297;1.3297 +;-;-;-;-;-;-;-;-;- + 216 + 1 1.193 49853.1 1.0 9572 4868 14433 HBL1_DMSO_200M_050219_2,14442 HBL1_DMSO_200M_050219_2,14442,YPASPWSHI True True YPASPWSHI 76.116036 529.259265124798 5103252.0 14433.0 ENST00000597589.5_1_19:47177782-47200527:-|nuORF;;ENST00000599019.5_1_19:47177782-47200527:-|nuORF;;nc|ENSG00000105287|Q9BZL6-3|PRKD2;;nc|ENSG00000105287|Q9BZL6-2|PRKD2;;ENSG00000105287|ENST00000291281|PRKD2 7.158894697825114 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14443 76.118 76.0 945990.0 25 0 123040.0 + 10586 FVIRNIVEA 9 92 530.8112621275001 1059.6079713218 2 530.8112670779228 MULTI CID FTMS 0 0 0 14433 460988.96875 0.0186840613664917 6 -0.5672378540039062 10 Unmodified _FVIRNIVEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 34.10243960390752 0.1078313939113124 4 V{I|L}RRVEA 7 3 23.791 0.0 0.0 2.2452 0.0 0.0 218.0905375716188 0.0 218.0905375716188 0.0 6.6237235590792665 0.0 0.0 0 0.0 0.0 1.1307196863200843 0.0 V{I|L}RRVEA 2.2452 - 115 + 1 1.193 63838.6 1.0 9573 4868 14433 HBL1_DMSO_200M_050219_2,14443 HBL1_DMSO_200M_050219_2,14443,FVIRNIVEA True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14444 76.119 40.0 1360600.0 25 0 90937.0 + 31396 KMMDVTVTI 9 91 518.7737514864057 1035.5329500396113 2 519.2742187380791 MULTI CID FTMS 0 0 0 14433 479100.0625 0.1783759036189435 -3 0.2813339233398437 11 Unmodified _RPDPSAPPSL_ ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;nc|ENSG00000185164|Q5JPE7|NOMO2 14.838274106304384 0.5985701837916485 4 [{I|L}T]T{[C(Carbamidomethyl (C))E]|[WC]}TV{[NV]|[RG]} 9 10 + 24.873 0.0 0.0 2.4019 2.4019 64.263 0.0 0.0 0.0 2.125299705980201 4.436974992327126 2.125299705980201 2.085521743960328 0 0.0 1.3979400086720375 0.7302046884880937 0.0 [{I|L}T]T{[C(Carbamidomethyl (C))E]|[WC]}TV{[NV]|[RG]};[{I|L}T][C(Carbamidomethyl (C))M]VTV{[NV]|[RG]};[QT][{M(Oxidation (M))|F}E]VTV{[NV]|[RG]} 2.4019;2.2005;1.3113 -;-;- 242 1 1.193 48845.4 1.0 9574 4868 14433 HBL1_DMSO_200M_050219_2,14444 HBL1_DMSO_200M_050219_2,14444,RPDPSAPPSL False False KMMDVTVTI 76.118973 519.274218738079 40448600.0 14433.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 4.306141376495361 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14445 76.122 140.0 628180.0 25 0 90899.0 + -1 VLCRLVCLSI 10 89 588.3352689514177 1174.6559849696353 2 588.3356201052666 MULTI CID FTMS 0 0 0 14433 457949.78125 0.7064237329641427 -4 0.3373031616210937 12 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))RLVCLSI_ REV__ENST00000447069.5_3_2:201677557-201677948:+|nuORF 3.944395688203298 0.708391353636983 4 {I|L} 1 -1 9.2694 0.0 0.0 0.78911 0.0 0.0 1043.561393760454 0.0 1043.561393760454 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.78911 + + 17 + 1 1.193 74071.2 1.0 9575 4868 14433 HBL1_DMSO_200M_050219_2,14445 HBL1_DMSO_200M_050219_2,14445,VLCRLVCLSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14446 76.126 220.0 304370.0 25 0 55565.0 + 17505 KPGVTHIIFRA 11 85 619.8692950800139 1237.7240372268277 2 619.8699218630791 MULTI CID FTMS 0 0 0 14433 420828.9375 0.5559967977552909 -4 0.3373031616210937 13 Unmodified _KPGVTHIIFRA_ REV__ENSG00000196505|ENST00000369443|GDAP2;REV__ENST00000369442.3_1_1:118455226-118455283:-|nuORF;REV__ENST00000493555.5_1_1:118439453-118462815:-|nuORF;REV__nc|ENSG00000196505|Q9NXN4-2|GDAP2 1.0714618166137932 0.8700927088084459 4 {I|L} 1 -1 9.6777 0.0 0.0 0.7819 0.0 0.0 1106.6289882539745 0.0 1106.6289882539745 0.0 0.1448184796765872 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.7819 + + 11 + 1 1.193 53073.8 1.0 9576 4868 14433 HBL1_DMSO_200M_050219_2,14446 HBL1_DMSO_200M_050219_2,14446,KPGVTHIIFRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14447 76.128 64.0 705150.0 25 0 103700.0 + 31004 RLFDDVPQV 9 62 544.789961043604 1087.5653691540078 2 544.7910034060478 MULTI CID FTMS 0 0 0 14433 372704.84375 0.8816820196098957 -1 0.11029052734375 14 Unmodified _RLFDDVPQV_ ENSG00000164818|ENST00000297440|DNAAF5;ENST00000438961.1_1_7:766900-790557:+|nuORF;nc|ENSG00000164818|Q86Y56-2|DNAAF5 32.78568957990786 0.1150597335874693 4 DVPQV 5 4 31.05 0.0 0.0 2.855 0.0 0.0 531.2827625959 0.0 531.2827625959 0.0 19.94084020450552 0.0 0.0 0 0.8831596456423735 0.0 0.0 0.0 + DVPQV 2.855 + + 38 1 1.193 47951.7 1.0 9577 4868 14433 HBL1_DMSO_200M_050219_2,14447 HBL1_DMSO_200M_050219_2,14447,RLFDDVPQV True True RLFDDVPQV 76.127598 544.791003406048 4567997.5 14433.0 nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENST00000438961.1_1_7:766900-790557:+|nuORF;;ENSG00000164818|ENST00000297440|DNAAF5 6.32553752263387 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14448 76.13 110.0 576520.0 25 0 36377.0 + 31180 RLPKDFVDL 9 96 551.8162546897389 1101.6179564462775 2 551.8162719607353 MULTI CID FTMS 0 0 0 14433 307493.65625 0.6763359732517351 2 -0.1488494873046875 15 Unmodified _RLPKDFVDL_ ENSG00000151465|ENST00000281141|CDC123;ENST00000497963.1_1_10:12288111-12291735:+|nuORF;ENST00000498747.1_1_10:12279256-12292333:+|nuORF 24.99096001346401 0.2132109383330889 4 D{M(Oxidation (M))|F}VD{I|L} 5 4 42.449 0.0 0.0 3.8533 0.0 0.0 494.3335743634781 0.0 494.3335743634781 0.0 30.45880017344075 0.0 0.0 0 0.75 0.0 0.0 0.0 + D{M(Oxidation (M))|F}VD{I|L} 3.8533 + + 118 1 1.193 56015.5 1.0 9578 4868 14433 HBL1_DMSO_200M_050219_2,14448 HBL1_DMSO_200M_050219_2,14448,RLPKDFVDL False True RLPKDFVDL 76.129927 551.816271960735 12282319.0 14433.0 ENST00000497963.1_1_10:12288111-12291735:+|nuORF;;ENST00000498747.1_1_10:12279256-12292333:+|nuORF;;ENSG00000151465|ENST00000281141|CDC123 5.233423233032227 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14449 76.133 143.0 408000.0 25 0 96886.0 + 18846 LASPHSPIL 9 92 467.7721415231159 0 467.7718688845634 PEAK CID FTMS 0 0 0 14433 275360.09375 0.8847372553587135 -1 0.11029052734375 16 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 44.40701690623563 0.0469661192146891 4 {I|L}[PS]A{I|L}S 6 5 34.486 0.0 0.0 3.6942 0.0 0.0 131.09254857181935 231.0891207330688 362.18166930488815 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.6989700043360187 0.0 {I|L}[PS]A{I|L}S 3.6942 - 179 + 1 1.193 50256.2 1.0 9579 4868 14433 HBL1_DMSO_200M_050219_2,14449 HBL1_DMSO_200M_050219_2,14449,LASPHSPIL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14450 76.135 99.0 461260.0 25 0 28723.0 10112 FPVPGSQLYV 10 81 553.7973500736375 1105.580147214075 2 553.7981445193291 MULTI CID FTMS 0 0 0 14433 223179.125 0.8846656554937823 -1 0.11029052734375 17 Unmodified _FPVPGSQLYV_ ENSG00000205084|ENST00000258173|TMEM231;nc|ENSG00000205084|Q9H6L2-2|TMEM231;nc|ENSG00000205084|Q9H6L2-3|TMEM231 20.453626601364224 0.5043500229302764 4 [YV]{I|L} 3 8 24.437 0.0 0.0 2.2103 0.0 0.0 0.0 727.3429090151093 727.3429090151093 7.626656038284452 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YV]{I|L} 2.2103 - 155 1 1.193 44522.6 1.0 9580 4868 14433 HBL1_DMSO_200M_050219_2,14450 HBL1_DMSO_200M_050219_2,14450,FPVPGSQLYV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14451 76.141 324.0 247640.0 25 0 37853.0 + 40113 VGLFIFITTWL 11 120 655.3823079751647 1308.7500630171294 2 655.3825561404228 MULTI CID FTMS 0 0 0 14433 213648.78125 0.2843653643273162 -11 1.029296875 18 Unmodified _VGLFIFITTWL_ REV__ENSG00000185873|ENST00000332644|TMPRSS11B 3.2813086475875832 0.8596665074481906 4 {I|L} 1 -1 9.0908 0.0 0.0 0.69462 0.0 0.0 1177.654983526698 0.0 1177.654983526698 0.0 3.606231995235856 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.69462 + + 104 + 1 1.193 72830.3 1.0 9581 4868 14433 HBL1_DMSO_200M_050219_2,14451 HBL1_DMSO_200M_050219_2,14451,VGLFIFITTWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14452 76.144 165.0 455440.0 25 0 33502.0 10689 FVVDHVIKI 9 118 535.3229156928446 1068.6312784524891 2 535.3240234255791 MULTI CID FTMS 0 0 0 14433 211319.078125 0.6966684070815241 1 -0.0466232299804687 19 Unmodified _FVVDHVIKI_ ENSG00000090686|ENST00000308271|USP48;ENST00000464577.1_1_1:22028060-22030944:-|nuORF;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48 28.49450938151212 0.1686335738423394 4 [{I|L}V][RH]{I|L}V[W{M(Oxidation (M))|F}] 8 7 + 32.72 0.0 0.0 3.0619 3.0619 63.824 0.0 0.0 0.0 1.713948555972756 1.713948555972756 1.713948555972756 1.303337684950062 0 0.3054621874040891 1.6989700043360187 0.0 0.0 [{I|L}V][RH]{I|L}V[W{M(Oxidation (M))|F}];[{I|L}V]V{[HG]|PP}{I|L}V[W{M(Oxidation (M))|F}];[HV]DV{M(Oxidation (M))|F}V{I|L}[K{I|L}];[{I|L}V][RH]V{I|L}[W{M(Oxidation (M))|F}];[{I|L}V]V{[HG]|PP}V{I|L}[W{M(Oxidation (M))|F}];[{I|L}V]{M(Oxidation (M))|F}[YR]MK{I|L};[{M(Oxidation (M))|F}V]{I|L}[YR]MK{I|L};[{I|L}V]V{[HG]|PP}{I|L}[MT]S{I|L};[{I|L}V][RH]V[W{M(Oxidation (M))|F}]{I|L};[{I|L}V]V[RH]{I|L}[W{M(Oxidation (M))|F}] 3.0619;2.9399;2.9015;2.7802;2.6582;2.3821;2.278;2.1951;2.1261;2.052 -;-;-;-;-;-;-;-;-;- 617 + 1 1.193 65452.8 1.0 9582 4868 14433 HBL1_DMSO_200M_050219_2,14452 HBL1_DMSO_200M_050219_2,14452,FVVDHVIKI False True VPMSTYLKM 76.1441 535.324023425579 1852561.125 14433.0 ENSG00000204954|ENST00000378090|UQCC6 3.2767697175343837 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14453 76.147 168.0 534270.0 25 0 75717.0 + 25099 MPYGSLYNV 9 136 522.2462041420782 1042.4778553509564 2 522.2469970583916 MULTI CID FTMS 0 0 0 14433 213137.5 0.2451199551018331 -3 0.2813339233398437 20 Unmodified _MPYGSLYNV_ ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-2|ILK;nc|ENSG00000166333|Q13418-3|ILK 44.40701690623563 0.0526327925666318 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GS{I|L}MYNV 9 2 + 46.582 0.0 0.0 4.4684 4.4684 72.726 0.0 0.0 0.0 3.6991128507179374 8.384767769392738 3.6991128507179374 3.6991128507179374 0 0.6989700043360187 0.6989700043360187 1.2302046884880935 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GS{I|L}MYNV;[TA][MT]{I|L}MYNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GSM{I|L}YNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GS{I|L}YMNV;[TA][MT]M{I|L}YNV;[{I|L}A]{M(Oxidation (M))|F}[VS]MYNV;[TA][MT]{I|L}YMNV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[VS]MYNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[VS]MYNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GMS{I|L}YNV 4.4684;4.1136;3.9385;3.7722;3.5837;3.4613;3.4174;3.3735;3.2975;3.2423 -;-;-;-;-;-;-;-;-;- 824 1 1.193 78143.3 1.0 9583 4868 14433 HBL1_DMSO_200M_050219_2,14453 HBL1_DMSO_200M_050219_2,14453,MPYGSLYNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14455 76.152 8.1 8239900.0 25 0 1052300.0 21935 LPPKVSVFV 9 92 493.30756668585485 984.6005804385096 2 493.3080932497978 MULTI CID FTMS 0 0 0 14454 4952151.5 0.8286020077925025 5 -0.5206146240234375 1 Unmodified _LPPKVSVFV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 24.020572477871973 0.2255576514309169 4 {I|L}P 2 7 43.711 0.0 0.0 4.4395 0.0 0.0 0.0 771.4422632462655 771.4422632462655 14.001290800069128 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.4395 + + 428 + 1 1.193 57045.2 1.0 9584 4869 14454 HBL1_DMSO_200M_050219_2,14455 HBL1_DMSO_200M_050219_2,14455,LPPKVSVFV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 14456 76.153 12.0 3996600.0 25 0 592780.0 + 43699 YAYDGKDYLAL 11 68 646.3140641308695 1290.613575328539 2 646.3144409060478 MULTI CID FTMS 0 0 0 14454 4079700.75 1.0 0 0.0 2 Unmodified _YAYDGKDYLAL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 37.77132515983256 0.2467275698964582 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAYY{I|L}A{I|L} 11 5 + 82.555 0.0 0.0 6.3966 6.3966 74.531 0.0 0.0 0.0 14.247425010840033 16.575773191777927 14.247425010840033 0.5546218740408904 0 1.2302046884880935 2.0 0.7302046884880937 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAYY{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}AYYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}YAYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAY{I|L}YA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DA{I|L}YYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}YA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DY{I|L}AYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}AYAY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}YAAY{I|L} 6.3966;6.3536;6.3348;6.1633;6.1633;6.1204;5.9301;5.8683;5.8254;5.8066 -;-;-;-;-;-;-;-;-;- 875 1 1.193 43116.3 1.0 9585 4869 14454 HBL1_DMSO_200M_050219_2,14456 HBL1_DMSO_200M_050219_2,14456,YAYDGKDYLAL False True YAYDGKDYLAL 76.153148 646.314440906048 106215504.0 14454.0 nc|ENSG00000204632|P17693-4|HLA-G;;nc|ENSG00000204632|P17693-5|HLA-G;;ENSG00000204632|ENST00000360323|HLA-G 4.260418732961019 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14457 76.155 105.0 972600.0 25 0 93510.0 + 32271 RWPDYVREL 9 88 411.88402130637087 1232.6302345193126 3 411.8840515017509 MULTI CID FTMS 0 0 0 14454 707263.875 0.6129212044477838 -5 0.3839263916015625 3 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 61.60191391372663 0.0251951588191061 4 [WR]PDY 5 4 41.14 0.0 0.0 3.3376 0.0 0.0 0.0 512.2827992774589 512.2827992774589 18.348396689760094 0.0 0.0 0.0 0 1.3182503180159344 1.6989700043360187 0.3494850021680094 0.25 + [WR]PDY 3.3376 + + 201 1 1.193 81601.3 1.0 9586 4869 14454 HBL1_DMSO_200M_050219_2,14457 HBL1_DMSO_200M_050219_2,14457,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14458 76.158 102.0 518500.0 25 0 29382.0 -1 0 70 881.4134278490112 1760.8123027648223 2 881.4142333865166 MULTI CID FTMS 0 0 0 14454 641148.4375 0.7348574609160096 2 -0.2250900268554687 4 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YK[{I|L}V] 15 -1 + 77.335 0.0 0.0 4.392 4.392 73.475 0.0 0.0 0.0 0.5886708272782641 60.14313464437279 0.5886708272782641 4.440320869257761 0 0.5 1.2218487496163564 0.0 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YK[{I|L}V];[QA]HDEAQQNA{M(Oxidation (M))|F}YK[{I|L}V];[YQ]V[CS]AQQNA{M(Oxidation (M))|F}YK[{I|L}V];[QA]HDAEQQNA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQGGA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]NA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QNA{M(Oxidation (M))|F}YK[{I|L}V];[YQ][KC]EQQNA{M(Oxidation (M))|F}YK[{I|L}V];[QA]HDEAQQGGA{M(Oxidation (M))|F}YK[{I|L}V];[QA]HDEA[AG]QNA{M(Oxidation (M))|F}YK[{I|L}V] 4.392;4.1398;4.04;3.9689;3.8791;3.8791;3.8791;3.7601;3.6269;3.6269 -;-;-;-;-;-;-;-;-;- 2117 1 1.193 44733.9 1.0 9587 4869 14454 HBL1_DMSO_200M_050219_2,14458 HBL1_DMSO_200M_050219_2,14458, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14459 76.16 109.0 690080.0 25 0 68145.0 + 44044 YILHVLQSL 9 83 543.3193218924204 1084.6240908516406 2 543.3196288943291 MULTI CID FTMS 0 0 0 14454 484338.625 0.4699731610009421 -1 0.0466232299804687 5 Unmodified _YILHVLQSL_ REV__ENSG00000215251|ENST00000380266|FASTKD5 39.957323273325 0.0756908302845263 4 DQ[TP]V{I|L}QS{I|L} 9 -1 61.961 0.0 0.0 5.7126 0.0 0.0 85.08986098457187 0.0 85.08986098457187 0.0 45.76274388132951 0.0 0.0 0 1.2302046884880935 0.0 0.3807196863200844 0.4247425010840047 DQ[TP]V{I|L}QS{I|L} 5.7126 - 226 1 1.193 65875.7 1.0 9588 4869 14454 HBL1_DMSO_200M_050219_2,14459 HBL1_DMSO_200M_050219_2,14459,YILHVLQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14460 76.174 800.0 371770.0 25 0 34664.0 + 18499 KYPDYEVTW 9 201 600.7823490005167 1199.5501450678332 2 600.7830688357353 MULTI CID FTMS 0 0 0 14454 212938.328125 0.2429606577126944 -2 0.1569137573242187 6 Unmodified _KYPDYEVTW_ ENSG00000054148|ENST00000247665|PHPT1 60.07390631473393 0.0260411565414776 4 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EYKVTW 9 5 + 85.477 0.0 0.0 7.1258 7.1258 80.803 0.0 0.0 0.0 7.403626894942448 8.965912507003608 7.403626894942448 2.535670587127313 0 1.1989700043360187 1.154901959985743 1.2728787452803376 0.5387254899964358 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EYKVTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EVYKTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}TVYGVTW;[DP]YEYKVTW;[DP]YEVYKTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KYEVTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EYVKTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}YKEVTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}T[YR]VTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}YEKVTW 7.1258;6.9144;6.6261;6.5086;6.2972;6.2709;6.0477;6.02;5.92;5.8732 -;-;-;-;-;-;-;-;-;- 14247 1 1.193 210282.0 0.9700000286102296 9589 4869 14454 HBL1_DMSO_200M_050219_2,14460 HBL1_DMSO_200M_050219_2,14460,KYPDYEVTW True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14461 76.176 130.0 513160.0 25 0 44917.0 + 39924 DMYLVPKL 8 113 497.78763308520365 993.5607132372072 2 497.7878600955009 MULTI CID FTMS 0 0 0 14454 183003.28125 0.3275665097440899 3 -0.2888946533203125 7 Unmodified _VFRSPLYI_ ENSG00000186141|ENST00000334163|POLR3C 14.581692164780916 0.6954967302934248 4 Y{I|L} 2 6 18.812 0.0 0.0 1.8934 0.0 0.0 699.4032252995105 0.0 699.4032252995105 0.0 8.534694670036469 0.0 0.0 0 0.5 0.0 0.0 0.0 + Y{I|L} 1.8934 + + 244 + 1 1.193 55383.3 1.0 9590 4869 14454 HBL1_DMSO_200M_050219_2,14461 HBL1_DMSO_200M_050219_2,14461,VFRSPLYI False False DMYLVPKL 76.176423 497.787860095501 1880046.375 14454.0 ENSG00000186141|ENST00000334163|POLR3C 3.4615721702575684 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14462 76.184 442.0 259220.0 25 0 41902.0 + -1 LSVPNNDCMV 10 125 574.7589706427858 1147.5033883523715 2 574.7598754763603 MULTI CID FTMS 0 0 0 14454 199585.25 0.4287521759915005 15 -1.44781494140625 8 Carbamidomethyl (C) _LSVPNNDC(Carbamidomethyl (C))MV_ REV__ENSG00000069122|ENST00000283296|ADGRF5;REV__nc|ENSG00000069122|Q8IZF2-2|ADGRF5 24.020572477871973 0.4289996903560794 4 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VWP 7 -1 51.458 0.0 0.0 4.4844 0.0 0.0 0.0 316.0439852350219 316.0439852350219 30.260394762458134 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VWP 4.4844 - 309 + 1 1.193 93025.4 1.0 9591 4869 14454 HBL1_DMSO_200M_050219_2,14462 HBL1_DMSO_200M_050219_2,14462,LSVPNNDCMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14463 76.193 480.0 399180.0 25 0 19576.0 + 31115 RLLPPGAVVAV 11 172 546.3502851266338 1090.6860173200675 2 546.3506347537041 MULTI CID FTMS 0 0 0 14454 167613.265625 0.310043338584323 12 -1.1911773681640625 9 Unmodified _RLLPPGAVVAV_ ENSG00000142544|ENST00000421832|CTU1 21.53697664764585 0.586507868110548 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}CV 7 8 40.168 0.0 0.0 3.6829 0.0 0.0 0.0 340.2819395214926 340.2819395214926 12.025166531265723 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.622363747448347 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}CV 3.6829 - 2075 1 1.193 154348.7 1.0 9592 4869 14454 HBL1_DMSO_200M_050219_2,14463 HBL1_DMSO_200M_050219_2,14463,RLLPPGAVVAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14464 76.2 400.0 398770.0 25 0 35059.0 + 28614 PVETQIVAV 9 159 478.2764568409711 954.5383607487422 2 478.2765380740166 MULTI CID FTMS 0 0 0 14454 154894.84375 0.6100726134643845 5 -0.5206146240234375 10 Unmodified _PVETQIVAV_ REV__ENSG00000070718|ENST00000396926|AP3M2;REV__nc|ENSG00000070718|P53677-2|AP3M2 16.942295170755138 0.3780752226737986 4 [EP]GA{I|L}VA 7 -1 25.805 0.0 0.0 2.7034 0.0 0.0 0.0 314.1720666781727 314.1720666781727 -2.4541619892919115 0.0 -2.4541619892919115 0.0 0 0.0 0.494850021680094 0.2396518287104437 0.0 [EP]GA{I|L}VA 2.7034 - 1313 1 1.193 127319.2 1.0 9593 4869 14454 HBL1_DMSO_200M_050219_2,14464 HBL1_DMSO_200M_050219_2,14464,PVETQIVAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14465 76.207 394.0 312030.0 25 0 35086.0 + 16378 IYQEKVLDL 9 148 560.8163640232482 1119.6181751132965 2 560.8167602419853 MULTI CID FTMS 0 0 0 14454 154631.34375 0.0157395043315578 6 -0.6225738525390625 11 Unmodified _IYQEKVLDL_ ENSG00000079616|ENST00000160827|KIF22;nc|ENSG00000079616|Q14807-2|KIF22 49.55428908609986 0.0413471690215031 4 {I|L}Y[{M(Oxidation (M))|F}V]{I|L}VQGD 9 6 57.877 0.0 0.0 5.1694 0.0 0.0 0.0 82.06694971256093 82.06694971256093 26.52220591081444 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.352568435936441 1.305462187404089 {I|L}Y[{M(Oxidation (M))|F}V]{I|L}VQGD 5.1694 - 4278 + 1 1.193 96343.9 1.0 9594 4869 14454 HBL1_DMSO_200M_050219_2,14465 HBL1_DMSO_200M_050219_2,14465,IYQEKVLDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14466 76.221 800.0 91607.0 25 0 8045.8 -1 0 100 680.9923177465089 0 680.9939453005791 PEAK CID FTMS 0 0 0 14454 140834.375 1.0 0 0.0 12 4 P{I|L}VE 4 -1 20.433 0.0 0.0 1.5025 0.0 0.0 634.5258915362125 284.1728914850219 918.6987830212344 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}VE 1.5025 - 27 + 1 1.193 63839.0 0.8500000238418579 9595 4869 14454 HBL1_DMSO_200M_050219_2,14466 HBL1_DMSO_200M_050219_2,14466, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14467 76.236 800.0 134280.0 25 0 6265.1 -1 0 124 754.6653406040109 2260.9741924122327 3 755.0020629763603 MULTI CID FTMS 0 0 0 14454 127370.9453125 1.0 0 0.0 13 4 {[TV]|[{I|L}S]}AAEAS{I|L} 8 -1 40.351 0.0 0.0 1.7847 0.0 0.0 0.0 1515.5654149066263 1515.5654149066263 15.391844421354357 0.0 0.0 0.0 0 0.5 1.6989700043360187 2.135151878060192 0.0 {[TV]|[{I|L}S]}AAEAS{I|L} 1.7847 - 4402 1 1.193 86044.7 0.8100000023841858 9596 4869 14454 HBL1_DMSO_200M_050219_2,14467 HBL1_DMSO_200M_050219_2,14467, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14468 76.25 800.0 283510.0 25 0 24839.0 + 9149 FFVLVQRQR 9 180 596.8497504182784 1191.6849479033567 2 596.8502685427666 MULTI CID FTMS 0 0 0 14454 122659.34375 1.0 0 0.0 14 Unmodified _FFVLVQRQR_ REV__ENSG00000272674|ENST00000609684|PCDHB16 4.75600775471527 0.7486543447549536 4 {I|L} 1 -1 10.969 0.0 0.0 0.92047 0.0 0.0 1060.5898684129254 0.0 1060.5898684129254 0.0 1.5719697861098147 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.92047 + + 259 + 1 1.193 169250.3 0.7699999809265137 9597 4869 14454 HBL1_DMSO_200M_050219_2,14468 HBL1_DMSO_200M_050219_2,14468,FFVLVQRQR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14470 76.254 35.0 1558600.0 25 0 368550.0 + 29834 QQLLKRAHVE 10 58 611.3562878849376 1220.6980228366751 2 611.3563110232353 MULTI CID FTMS 0 0 0 14469 1871394.75 0.7276157366298921 -2 0.1488494873046875 1 Unmodified _QQLLKRAHVE_ REV__ENSG00000039139|ENST00000265104|DNAH5 1.3295316138638542 0.7204866299213272 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.2 47592.2 1.0 9598 4870 14469 HBL1_DMSO_200M_050219_2,14470 HBL1_DMSO_200M_050219_2,14470,QQLLKRAHVE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14471 76.268 800.0 342760.0 25 0 37654.0 + 10688 FVVDHVIKI 9 206 357.21849470911866 1068.633654727556 3 357.2181274294853 MULTI CID FTMS 0 0 0 14469 131303.53125 0.2764684838286802 3 -0.338104248046875 2 Unmodified _FVVDHVIKI_ ENSG00000090686|ENST00000308271|USP48;ENST00000464577.1_1_1:22028060-22030944:-|nuORF;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-5|USP48;nc|ENSG00000090686|Q86UV5-8|USP48 19.62595529434964 0.305431704817896 4 {M(Oxidation (M))|F}VVDH[{I|L}V]K{I|L} 9 0 + 44.993 0.0 0.0 4.2103 4.2103 71.717 0.0 0.0 0.0 29.37776293846137 1.1365112015771075 1.1365112015771075 3.724089770347021 0 0.4559771852360796 0.5228787452803376 0.0 0.1382104921644452 + + {M(Oxidation (M))|F}VVDH[{I|L}V]K{I|L};{M(Oxidation (M))|F}VVD{I|L}[HV]K{I|L};{M(Oxidation (M))|F}V{I|L}VD[HV]K{I|L};{M(Oxidation (M))|F}VV{I|L}D[HV]K{I|L};{M(Oxidation (M))|F}V{I|L}V[RP][EP]{I|L};{M(Oxidation (M))|F}VV{I|L}[RP][EP]{I|L} 4.2103;3.8618;3.4607;3.4154;2.6493;2.6039 +;-;-;-;-;- + 265 + 1 1.2 228429.1 0.9399999976158142 9599 4870 14469 HBL1_DMSO_200M_050219_2,14471 HBL1_DMSO_200M_050219_2,14471,FVVDHVIKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14472 76.269 4.4 16517000.0 25 0 2144600.0 + 18558 LAADWLPSL 9 76 493.2698609723554 984.5251690115108 2 493.2703124880791 MULTI CID FTMS 0 0 0 14469 11192128.0 0.4619644790031455 -2 0.1488494873046875 3 Unmodified _LAADWLPSL_ ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1 34.10243960390752 0.1078313939113124 4 [{I|L}P][KC]D{I|L}PS{I|L} 9 4 + 52.84 0.0 0.0 5.367 5.367 75.016 0.0 0.0 0.0 14.89454989793387 30.092955308916487 14.89454989793387 3.0102999566398125 0 1.1677353201839438 1.6989700043360187 0.7059771852360797 0.0 [{I|L}P][KC]D{I|L}PS{I|L};[{I|L}P][KC]{I|L}DPS{I|L};[{I|L}P][KC]DP{I|L}S{I|L};[{I|L}P][KC]{I|L}S[DP]{I|L};[VG]{[RE]|[WV]}D{I|L}PS{I|L};[VG]{[RE]|[WV]}{I|L}DPS{I|L};[{I|L}P][KC]{I|L}S{I|L}[DP];[VG]{[RE]|[WV]}DP{I|L}S{I|L};[VG]{[RE]|[WV]}{I|L}S[DP]{I|L};[PS][KG][KG]S{I|L}[DP] 5.367;5.0613;4.0442;3.6705;3.3356;3.0298;2.6735;2.0128;1.639;1.1267 -;-;-;-;-;-;-;-;-;- 293 1 1.2 66847.7 1.0 9600 4870 14469 HBL1_DMSO_200M_050219_2,14472 HBL1_DMSO_200M_050219_2,14472,LAADWLPSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14473 76.271 53.0 1175100.0 25 0 400580.0 24594 MLKKEEAIP 9 75 529.7991452706331 1057.583737608066 2 530.2982055544853 MULTI CID FTMS 0 0 0 14469 734885.6875 0.4390020096426707 -6 0.4861526489257812 4 Unmodified _MLKKEEAIP_ ENSG00000135365|ENST00000676320|PHF21A;ENST00000527401.5_1_11:45957138-45987102:-|nuORF;nc|ENSG00000135365|Q96BD5-2|PHF21A;nc|ENSG00000135365|Q96BD5|PHF21A 7.910154910731844 0.6385446671287552 4 [PG]{M(Oxidation (M))|F}P 4 8 26.823 0.0 0.0 2.5362 0.0 0.0 0.0 656.3660306591004 656.3660306591004 9.034114485472491 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [PG]{M(Oxidation (M))|F}P 2.5362 - 79 1 1.2 56036.1 1.0 9601 4870 14469 HBL1_DMSO_200M_050219_2,14473 HBL1_DMSO_200M_050219_2,14473,MLKKEEAIP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14474 76.273 127.0 714420.0 25 0 90972.0 + 31548 RQLEEEGITFV 11 72 660.8432260978086 1319.6718992624171 2 660.8436767458916 MULTI CID FTMS 0 0 0 14469 426807.46875 0.2284090069867423 -2 0.1488494873046875 5 Unmodified _RQLEEEGITFV_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 32.89776655970281 0.3218023389984559 4 EEG{I|L}T{M(Oxidation (M))|F}V 7 4 68.461 0.0 0.0 5.1878 0.0 0.0 526.2863636701187 0.0 526.2863636701187 0.0 61.47176992505884 0.0 0.0 0 1.274227503252014 0.0 0.8252574989159953 0.0 + EEG{I|L}T{M(Oxidation (M))|F}V 5.1878 + + 389 1 1.2 76556.0 1.0 9602 4870 14469 HBL1_DMSO_200M_050219_2,14474 HBL1_DMSO_200M_050219_2,14474,RQLEEEGITFV False True RQLEEEGITFV 76.273366 660.843676745892 32050996.0 14469.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 6.742012977600098 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14475 76.275 53.0 1004500.0 25 0 93617.0 + -1 MPVIPMNTI 9 96 516.2661546718535 1030.517756410507 2 516.2671386599541 MULTI CID FTMS 0 0 0 14469 414158.78125 0.7044115677353516 -2 0.1488494873046875 6 Oxidation (M) _M(Oxidation (M))PVIPMNTI_ nc|ENSG00000147162|O15294-3|OGT;ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-4|OGT;nc|ENSG00000147162|O15294-2|OGT 34.18733598223924 0.1073653526364521 4 [{I|L}T]NQPM 6 -1 22.317 0.0 0.0 2.1656 0.0 0.0 0.0 343.15939394396327 343.15939394396327 3.3328156903301185 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [{I|L}T]NQPM 2.1656 - 276 1 1.2 47011.8 1.0 9603 4870 14469 HBL1_DMSO_200M_050219_2,14475 HBL1_DMSO_200M_050219_2,14475,MPVIPMNTI False False MPVIPMNTI 76.274752 516.267138659954 4824092.5 14469.0 nc|ENSG00000147162|O15294-3|OGT;;ENSG00000147162|ENST00000373719|OGT;;nc|ENSG00000147162|O15294-4|OGT;;nc|ENSG00000147162|O15294-2|OGT 3.4842637379964194 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14476 76.277 89.0 671640.0 25 0 52417.0 + 32168 RVSEFFMNA 9 84 550.7639055317443 1099.5132581302885 2 550.7639037966728 MULTI CID FTMS 0 0 0 14469 398459.9375 0.7260388775057465 -1 0.1022262573242187 7 Unmodified _RVSEFFMNA_ ENSG00000071243|ENST00000315870|ING3;nc|ENSG00000071243|Q9NXR8-2|ING3;nc|ENSG00000071243|Q9NXR8-3|ING3 16.149105407346934 0.3995459350917656 4 [MN]{I|L}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}M{[QG]|[NA]} 9 4 + 25.168 0.0 0.0 2.289 2.289 63.417 0.0 0.0 0.0 1.7120467177745304 10.474921663574296 1.7120467177745304 1.7609125905568137 0 0.4247425010840047 0.0 0.0 0.3807196863200844 [MN]{I|L}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}M{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}SAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}M{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}[QT]{M(Oxidation (M))|F}{M(Oxidation (M))|F}M{[QG]|[NA]};[VS]{[RE]|[WV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}M{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}TAA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R];{[QN]|[E{I|L}]|[KN]}N[YV]{M(Oxidation (M))|F}M{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}Q[YV]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R];{[QN]|[E{I|L}]|[KN]}GG[YV]{M(Oxidation (M))|F}M{[QG]|[NA]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))R][KS][C(Carbamidomethyl (C))R];{[DA]|[EG]}{[VA]|[{I|L}G]}[YV]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R] 2.289;2.1288;1.9687;1.8234;1.7425;1.4211;1.0397;0.58363;0.45184;0.39863 -;-;-;-;-;-;-;-;-;- 140 1 1.2 50340.5 1.0 9604 4870 14469 HBL1_DMSO_200M_050219_2,14476 HBL1_DMSO_200M_050219_2,14476,RVSEFFMNA False True RVSEFFMNA 76.276729 550.763903796673 4707362.0 14469.0 nc|ENSG00000071243|Q9NXR8-2|ING3;;ENSG00000071243|ENST00000315870|ING3;;nc|ENSG00000071243|Q9NXR8-3|ING3 7.070775032043457 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14477 76.279 85.0 603680.0 25 0 54437.0 + 43179 VYVDLIHSY 9 88 554.785406312105 1107.55625969101 2 554.7861205935478 MULTI CID FTMS 0 0 0 14469 307880.75 1.0 0 0.0 8 Unmodified _VYVDLIHSY_ ENSG00000111331|ENST00000228928|OAS3 28.486842064014134 0.1687311288560894 4 [YV]VD{I|L}{I|L}C(Carbamidomethyl (C))QV 9 3 + 42.571 0.0 0.0 3.8437 3.8437 67.112 0.0 0.0 0.0 19.49401151747452 1.9188552623891293 1.9188552623891293 1.9188552623891293 0 0.8182503180159344 2.0 0.3807196863200844 0.0 [YV]VD{I|L}{I|L}C(Carbamidomethyl (C))QV;[YV]VD{I|L}{I|L}C(Carbamidomethyl (C))N{I|L};[YV]VD[RK]DDV;[YV][YK][NP]EPV;[YV][R{M(Oxidation (M))|F}]VY[YV];{NN|[MP]|[D{I|L}]|[EV]}VN{I|L}[YQ]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV][YK]HH[YV];[EP][KS]{I|L}[YQ]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[HS]{I|L}{I|L}VDY[YV];[HS]{I|L}{I|L}DVY[YV] 3.8437;3.6704;2.7858;2.6522;2.4993;1.4108;1.3897;1.1913;0.7106;0.65015 -;-;-;-;-;-;-;-;-;- 343 + 1 1.2 47327.5 1.0 9605 4870 14469 HBL1_DMSO_200M_050219_2,14477 HBL1_DMSO_200M_050219_2,14477,VYVDLIHSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14478 76.281 116.0 575660.0 25 0 52821.0 + + 23739 YIEQTLVTV 9 104 533.2984411584046 1064.582329383609 2 533.2950927615166 MULTI CID FTMS 0 0 0 14469 305148.125 0.2233301072918752 -3 0.2591400146484375 9 Unmodified _LTVYRDVSL_ ENSG00000100811|ENST00000262238|YY1 24.020572477871973 0.2255576514309169 4 [Y{I|L}]EQT{I|L}VS{I|L} 9 -1 + 46.213 0.0 0.0 4.341 4.341 72.685 0.0 0.0 0.0 10.868193983395637 11.382353118286233 10.868193983395637 4.005149978319906 0 0.3935078169319297 1.6989700043360187 0.9247425010840048 0.0 [Y{I|L}]EQT{I|L}VS{I|L};[Y{I|L}]EQTV{I|L}S{I|L};[Y{I|L}]E[AG]T{I|L}VS{I|L};{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]T{I|L}VS{I|L};{[QN]|[E{I|L}]|[KN]}QYT{I|L}VS{I|L};[Y{I|L}][KQ][HT]Y{I|L};[Y{I|L}]E[AG]TV{I|L}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YT{I|L}VS{I|L};{NN|[MP]|[D{I|L}]|[EV]}AAYT{I|L}VS{I|L};{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]TV{I|L}S{I|L} 4.341;3.9647;3.476;3.3201;3.2644;3.2125;3.0998;3.0446;3.0278;2.9439 -;-;-;-;-;-;-;-;-;- 980 1 1.2 60474.4 1.0 9606 4870 14469 HBL1_DMSO_200M_050219_2,14478 HBL1_DMSO_200M_050219_2,14478,LTVYRDVSL False False YIEQTLVTV 76.281079 533.295092761517 6022196.0 14469.0 ENSG00000100811|ENST00000262238|YY1 5.228368918100993 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14479 76.287 322.0 499420.0 25 0 57360.0 + 12389 GTIGEVKDLAL 11 156 558.3195260751135 1114.6244992170268 2 558.3193237185478 MULTI CID FTMS 0 0 0 14469 283313.75 0.8269409722177883 -1 0.1022262573242187 10 Unmodified _GTIGEVKDLAL_ ENST00000467388.1_1_2:216203501-216211697:+|nuORF 48.07275321834293 0.1283031204265279 4 {NN|[MP]|[D{I|L}]|[EV]}AKVDAS{I|L}A{I|L} 11 7 + 67.641 0.0 0.0 6.0685 6.0685 74.71 0.0 0.0 0.0 1.920300493783188 16.57577319177794 1.920300493783188 1.2832495658415013 0 0.8494850021680094 0.7695510786217261 0.3494850021680094 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}AKVDAS{I|L}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}KAVDAS{I|L}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}AKVDA{I|L}SA{I|L};{[QN]|[E{I|L}]|[KN]}GKVDAS{I|L}A{I|L};{[DA]|[EG]}{I|L}KVDAS{I|L}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}KAVDA{I|L}SA{I|L};{[QN]|[E{I|L}]|[KN]}GKVDA{I|L}SA{I|L};{[DA]|[EG]}{I|L}KVDA{I|L}SA{I|L};{NN|[MP]|[D{I|L}]|[EV]}GRS{I|L}AS{I|L}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}KVADAS{I|L}A{I|L} 6.0685;5.9534;5.9105;5.8962;5.7984;5.7954;5.7382;5.6404;5.5804;5.5253 -;-;-;-;-;-;-;-;-;- 9354 1 1.2 124290.7 1.0 9607 4870 14469 HBL1_DMSO_200M_050219_2,14479 HBL1_DMSO_200M_050219_2,14479,GTIGEVKDLAL False True GTIGEVKDLAL 76.286941 558.319323718548 2247721.0 14469.0 ENST00000467388.1_1_2:216203501-216211697:+|nuORF 3.5492802460988364 2.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14480 76.301 800.0 385640.0 25 0 31882.0 + 37112 TGVLVRLP 8 199 427.7764388341945 853.538324735189 2 427.7766601443291 MULTI CID FTMS 0 0 0 14469 200116.78125 0.7784287371128225 1 -0.12286376953125 11 Unmodified _TGVLVRLP_ REV__ENST00000498438.1_1_2:176973927-176974179:+|nuORF 34.10243960390752 0.3329570729325616 4 {[SA]|[TG]}VV{I|L}PR{I|L} 8 -1 + 65.814 0.0 0.0 7.7108 7.7108 87.71 0.0 0.0 0.0 22.21848749616356 8.168882363133747 8.168882363133747 6.2433116020198725 0 1.1237125054200234 1.5228787452803376 0.0 0.8536348176228749 {[SA]|[TG]}VV{I|L}PR{I|L};{[SA]|[TG]}V{I|L}VPR{I|L};{[SA]|[TG]}VV{I|L}{I|L}RP;{[SA]|[TG]}V{I|L}V{I|L}RP;{[SA]|[TG]}{I|L}VVPR{I|L};{[SA]|[TG]}{I|L}VV{I|L}RP;{[SA]|[TG]}V{I|L}RP{I|L}V;{[SA]|[TG]}V{I|L}RPV{I|L};{[SA]|[TG]}VV{I|L}{I|L}[RP];{[SA]|[TG]}V{I|L}V{I|L}[RP] 7.7108;6.9793;6.7537;6.0223;5.6628;4.7057;4.5413;4.395;3.8957;3.6455 -;-;-;-;-;-;-;-;-;- 1142 + 1 1.2 236333.5 0.75 9608 4870 14469 HBL1_DMSO_200M_050219_2,14480 HBL1_DMSO_200M_050219_2,14480,TGVLVRLP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14481 76.315 800.0 216740.0 25 0 24009.0 + 22078 LPPPTLRI 8 141 453.7924634572879 0 453.7921935915947 PEAK CID FTMS 0 0 0 14469 158325.890625 0.0048816126748799 36 -3.750900268554688 12 Unmodified _LPPPTLRI_ ENSG00000221821|ENST00000408925|C6orf226 32.30548876998284 0.2094692153732555 4 PPP 3 5 21.209 0.0 0.0 2.342 0.0 0.0 113.08380072065457 498.30536829166255 611.3891690123171 0.0 0.0 0.0 0.0 0 0.8505762035186218 0.0 0.0 0.0 + PPP 2.342 + + 238 + 1 1.2 138210.0 0.6700000166893005 9609 4870 14469 HBL1_DMSO_200M_050219_2,14481 HBL1_DMSO_200M_050219_2,14481,LPPPTLRI False True LPPPTLRI 76.314574 453.792193591595 71529160.0 14469.0 ENSG00000221821|ENST00000408925|C6orf226 1.6750783721605935 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14482 76.328 800.0 303390.0 25 0 25193.0 + 14401 IFIDRDPAAF 10 191 582.8064636005016 1163.5983742678031 2 582.8075439333916 MULTI CID FTMS 0 0 0 14469 128619.5 0.5293594862163866 -2 0.1488494873046875 13 Unmodified _IFIDRDPAAF_ ENSG00000136636|ENST00000259154|KCTD3;nc|ENSG00000136636|Q9Y597-2|KCTD3 51.487983226225225 0.0714176344394665 4 {I|L}{M(Oxidation (M))|F}{I|L}DRDPAA{M(Oxidation (M))|F} 10 0 + 58.07 0.0 0.0 4.9905 4.9905 78.639 0.0 0.0 0.0 15.026975159433531 9.739605237541866 9.739605237541866 6.989700043360188 0 2.172167511924052 0.0 0.3494850021680094 0.0 + + {I|L}{M(Oxidation (M))|F}{I|L}DRDPAA{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}VERDPAA{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}{I|L}DRDWS{I|L};{I|L}{M(Oxidation (M))|F}{I|L}DRDWTV;{I|L}{M(Oxidation (M))|F}VERDWS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RD]{M(Oxidation (M))|F}{I|L}PAA{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}VERDWTV;{I|L}{M(Oxidation (M))|F}{I|L}[HV]{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F};[PA]A{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}PAA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}PAA{M(Oxidation (M))|F} 4.9905;4.3898;4.1535;3.8948;3.5528;3.4038;3.2941;3.1559;3.025;2.9457 +;-;-;-;-;-;-;-;-;- + 5448 + 1 1.2 179406.9 0.7699999809265137 9610 4870 14469 HBL1_DMSO_200M_050219_2,14482 HBL1_DMSO_200M_050219_2,14482,IFIDRDPAAF True True IFIDRDPAAF 76.328408 582.807543933392 1956061.25 14469.0 nc|ENSG00000136636|Q9Y597-2|KCTD3;;ENSG00000136636|ENST00000259154|KCTD3 6.837897777557373 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14483 76.344 800.0 79490.0 25 0 15930.0 -1 0 53 1178.15369023739 3531.4392413123705 3 1178.822802722454 MULTI CID FTMS 0 0 0 14469 117442.0625 1.0 0 0.0 14 4 E 1 -1 6.9897 0.0 0.0 0.19793 0.0 0.0 2875.209436997625 524.1617525690061 3399.371189566631 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19793 - 34 + 1 1.2 54350.3 0.7599999904632568 9611 4870 14469 HBL1_DMSO_200M_050219_2,14483 HBL1_DMSO_200M_050219_2,14483, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14484 76.358 800.0 104860.0 25 0 8538.6 45351 YSQHYQRLMTV 11 130 713.3534705558883 0 713.3540527224541 PEAK CID FTMS 0 0 0 14469 96389.9453125 1.0 0 0.0 15 Unmodified _YSQHYQRLMTV_ ENSG00000184014|ENST00000328194|DENND5A;nc|ENSG00000184014|Q6IQ26-2|DENND5A 13.042465956692816 0.4221659143281722 4 MTVE 4 9 26.918 0.0 0.0 1.8894 0.0 0.0 861.4521670865828 100.02323328189686 961.4754003684797 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9204841662593096 0.0 MTVE 1.8894 - 533 + 1 1.2 62990.8 0.8199999928474426 9612 4870 14469 HBL1_DMSO_200M_050219_2,14484 HBL1_DMSO_200M_050219_2,14484,YSQHYQRLMTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14485 76.373 800.0 136640.0 25 0 12524.0 -1 0 121 1117.5002376790949 0 1117.502490222454 PEAK CID FTMS 0 0 0 14469 80289.875 0.7411069329970971 -1 0.1022262573242187 16 4 {I|L}VQY{M(Oxidation (M))|F}ANQQA{M(Oxidation (M))|F}G{M(Oxidation (M))|F} 13 -1 83.411 0.0 0.0 3.7354 0.0 0.0 490.1983990869024 226.08371912174064 716.282118208643 0.0 0.0 0.0 0.0 0 2.0228787452803374 0.0 0.0 0.4247425010840047 {I|L}VQY{M(Oxidation (M))|F}ANQQA{M(Oxidation (M))|F}G{M(Oxidation (M))|F} 3.7354 - 10781 + 1 1.2 73478.9 0.7900000214576721 9613 4870 14469 HBL1_DMSO_200M_050219_2,14485 HBL1_DMSO_200M_050219_2,14485, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14487 76.377 3.2 16355000.0 25 0 2971000.0 + 2565 ASFNDTFVHV 10 76 568.7721235806049 1135.5296942280097 2 568.7732421755791 MULTI CID FTMS 0 0 0 14486 14720773.0 0.6622553270514756 1 -0.0638046264648437 1 Unmodified _ASFNDTFVHV_ ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF 49.93300154707207 0.0805441195901191 4 {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV] 10 0 + 77.752 0.0 0.0 6.8472 6.8472 91.368 0.0 0.0 0.0 52.23242737174388 7.269987279362624 7.269987279362624 13.411964496339309 0 0.3054621874040891 1.3979400086720375 0.805462187404089 0.4247425010840047 + + {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}V[HV];{[SA]|[TG]}{M(Oxidation (M))|F}GGDT{M(Oxidation (M))|F}V[HV];{[SA]|[TG]}{M(Oxidation (M))|F}N[RK][NG]{[QD]|[EN]|[WG]|[KD]|[RS]};{[ES]|[DT]|[{I|L}C]}[RK]TDN{[WT]|[RM]};{[SA]|[TG]}{M(Oxidation (M))|F}NKKCC[HV];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDN{[WT]|[RM]};{[SA]|[TG]}[{I|L}V][C(Carbamidomethyl (C))K]TD{[QD]|[EN]|[WG]|[KD]|[RS]};{[ES]|[DT]|[{I|L}C]}[RK]TDGG{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDGG{[WT]|[RM]};[WH]VN[MD]V[HV] 6.8472;5.6661;3.3548;2.7702;2.6803;2.5454;2.3455;1.9593;1.7345;1.5047 +;-;-;-;-;-;-;-;-;- + 233 + 1 1.207 43051.1 1.0 9614 4871 14486 HBL1_DMSO_200M_050219_2,14487 HBL1_DMSO_200M_050219_2,14487,ASFNDTFVHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14488 76.378 24.0 2162100.0 25 0 235470.0 + 21692 LPLQENVTI 9 91 513.7940928524608 1025.5736327717216 2 513.7955810427666 MULTI CID FTMS 0 0 0 14486 2034629.125 0.679814978101624 2 -0.215240478515625 2 Unmodified _LPLQENVTI_ ENSG00000142945|ENST00000372224|KIF2C;ENST00000480574.1_1_1:45212428-45216012:+|nuORF;ENST00000493027.5_1_1:45205556-45221765:+|nuORF;nc|ENSG00000142945|Q99661-2|KIF2C 43.85829265575387 0.0542763391141878 4 [{I|L}P]QEN{I|L}VT{I|L} 9 2 + 62.63 0.0 0.0 6.1068 6.1068 75.693 0.0 0.0 0.0 16.989700043360187 10.330145895351848 10.330145895351848 1.7609125905568137 0 0.8182503180159344 1.6989700043360187 0.0 0.7614393726401688 [{I|L}P]QEN{I|L}VT{I|L};[{I|L}P]QE{I|L}NVT{I|L};[{I|L}P]QENV{I|L}T{I|L};[{I|L}P]Q{I|L}ENVT{I|L};[{I|L}P][AG]EN{I|L}VT{I|L};[{I|L}P]QEGG{I|L}VT{I|L};[{I|L}P][AG]E{I|L}NVT{I|L};[{I|L}P]QE{I|L}GGVT{I|L};[{I|L}P]QEGGV{I|L}T{I|L};[{I|L}P][AG]ENV{I|L}T{I|L} 6.1068;5.9351;5.7399;5.4046;5.2089;5.2089;5.0372;5.0372;4.842;4.842 -;-;-;-;-;-;-;-;-;- 500 1 1.207 44811.0 1.0 9615 4871 14486 HBL1_DMSO_200M_050219_2,14488 HBL1_DMSO_200M_050219_2,14488,LPLQENVTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14489 76.379 14.0 3662200.0 25 0 238220.0 + 30004 QTGHAPGGRR 10 93 518.7737514864057 1035.5329500396113 2 518.7760497927666 MULTI CID FTMS 0 0 0 14486 2769242.0 1.0 0 0.0 3 Unmodified _QTGHAPGGRR_ REV__ENSG00000112309|ENST00000230053|B3GAT2 9.38312468134398 0.6832340498775793 4 [QT]{I|L}{[{M(Oxidation (M))|F}D]|MM}TV{[NV]|[RG]} 9 -1 + 28.463 0.0 0.0 2.7486 2.7486 76.809 0.0 0.0 0.0 12.884848461716366 5.610753807461176 5.610753807461176 13.05462187404089 0 0.0 1.154901959985743 0.7302046884880937 0.0 [QT]{I|L}{[{M(Oxidation (M))|F}D]|MM}TV{[NV]|[RG]};[{I|L}T]Q{[{M(Oxidation (M))|F}D]|MM}TV{[NV]|[RG]};[{I|L}T][AG]{[{M(Oxidation (M))|F}D]|MM}TV{[NV]|[RG]};[NP]{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V{[NV]|[RG]} 2.7486;1.488;0.59873;0.10954 -;-;-;- 127 1 1.207 44646.8 1.0 9616 4871 14486 HBL1_DMSO_200M_050219_2,14489 HBL1_DMSO_200M_050219_2,14489,QTGHAPGGRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14490 76.381 14.0 2980100.0 25 0 550990.0 + 34720 SPYHGFTIV 9 70 510.7627020067284 1019.5108510802568 2 510.7620422244072 MULTI CID FTMS 0 0 0 14486 2508973.0 0.9090714915971124 -1 0.12286376953125 4 Unmodified _SPYHGFTIV_ ENSG00000272886|ENST00000610213|DCP1A;nc|ENSG00000272886|Q9NPI6-2|DCP1A 21.74664581756881 0.2544899275067181 4 G{M(Oxidation (M))|F}T{I|L}V 5 4 28.628 0.0 0.0 2.808 0.0 0.0 484.20640761543126 0.0 484.20640761543126 0.0 13.143265708843046 0.0 0.0 0 0.7429928190999391 0.0 0.5 0.0 + G{M(Oxidation (M))|F}T{I|L}V 2.808 + + 113 1 1.207 37476.6 1.0 9617 4871 14486 HBL1_DMSO_200M_050219_2,14490 HBL1_DMSO_200M_050219_2,14490,SPYHGFTIV False True SPYHGFTIV 76.380595 510.762042224407 23381294.0 14486.0 ENSG00000272886|ENST00000610213|DCP1A;;nc|ENSG00000272886|Q9NPI6-2|DCP1A 7.480942726135254 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14491 76.382 29.0 2733700.0 25 0 644890.0 + 32263 RWPDYVREL 9 58 617.3224849501827 1232.6304169671653 2 617.3228027224541 MULTI CID FTMS 0 0 0 14486 1898969.75 0.7420712343070585 -6 0.5530471801757812 5 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 45.739877483867886 0.0497104363764649 4 [WR][DP]YVR{M(Oxidation (M))|F} 8 2 62.867 0.0 0.0 5.1002 0.0 0.0 0.0 110.0601636249302 110.0601636249302 52.27090561249534 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 1.524227503252014 [WR][DP]YVR{M(Oxidation (M))|F} 5.1002 - 144 1 1.207 65228.5 1.0 9618 4871 14486 HBL1_DMSO_200M_050219_2,14491 HBL1_DMSO_200M_050219_2,14491,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14492 76.383 32.0 1422000.0 25 0 176700.0 + 17750 KQADPFASL 9 70 488.75928501726406 975.504017101328 2 488.7593566775322 MULTI CID FTMS 0 0 0 14486 1640300.5 0.7530514804621237 1 -0.0638046264648437 6 Unmodified _KQADPFASL_ ENSG00000148110|ENST00000375344|MFSD14B;nc|ENSG00000148110|Q5SR56-2|MFSD14B 57.72198328787511 0.0273433238377839 4 {[TV]|[{I|L}S]}A[NG]P{M(Oxidation (M))|F}AS{I|L} 10 4 + 73.311 0.0 0.0 7.5152 7.5152 92.518 0.0 0.0 0.0 11.461280356782382 16.53212513775344 11.461280356782382 11.461280356782382 0 0.7887254899964358 1.5228787452803376 0.3494850021680094 0.3054621874040891 {[TV]|[{I|L}S]}A[NG]P{M(Oxidation (M))|F}AS{I|L};{[SA]|[TG]}{I|L}[NG]P{M(Oxidation (M))|F}AS{I|L};{[TV]|[{I|L}S]}[WD]GKAS{I|L};{[TV]|[{I|L}S]}[WD]QKS{I|L};{[TV]|[{I|L}S]}A[NG]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ADAGKAS{I|L};{[TV]|[{I|L}S]}[WD]GAKS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ADAQKS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TP]P{M(Oxidation (M))|F}AS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ADAGAKS{I|L} 7.5152;6.3403;4.9992;4.9055;4.8034;4.7269;4.7033;4.6276;4.5941;4.4309 -;-;-;-;-;-;-;-;-;- 343 1 1.207 42519.1 1.0 9619 4871 14486 HBL1_DMSO_200M_050219_2,14492 HBL1_DMSO_200M_050219_2,14492,KQADPFASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14493 76.384 34.0 1607300.0 25 0 367550.0 + 15562 IPYHIVNI 8 84 484.782636084376 967.550719235552 2 484.7826415896416 MULTI CID FTMS 0 0 0 14486 1315462.25 0.9321632476918466 1 -0.0638046264648437 7 Unmodified _IPYHIVNI_ ENSG00000031698|ENST00000234677|SARS1 45.7499826716795 0.1592378023510922 4 {I|L}DV[HQ]N{I|L} 7 4 36.018 0.0 0.0 3.7226 0.0 0.0 130.10590829980816 0.0 130.10590829980816 0.0 22.830466571458743 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.5 {I|L}DV[HQ]N{I|L} 3.7226 - 340 + 1 1.207 46852.0 1.0 9620 4871 14486 HBL1_DMSO_200M_050219_2,14493 HBL1_DMSO_200M_050219_2,14493,IPYHIVNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14494 76.385 35.0 1340800.0 25 0 128330.0 + 41460 VPLPAENVTI 10 76 526.8030293126947 1051.5915056921892 2 526.8041869997978 MULTI CID FTMS 0 0 0 14486 1202540.625 0.4326780625960562 4 -0.3974838256835937 8 Unmodified _VPLPAENVTI_ ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 36.12702656103203 0.1984647928738587 4 [{I|L}P]V[PA]ENVT{I|L} 10 2 + 41.304 0.0 0.0 3.9277 3.9277 66.426 0.0 0.0 0.0 1.4612803567823818 9.616808377508193 1.4612803567823818 1.4612803567823818 0 0.8182503180159344 1.2218487496163564 0.0 0.4247425010840047 [{I|L}P]V[PA]ENVT{I|L};[VP]{I|L}[PA]ENVT{I|L};[{I|L}P]V[PA]EGGVT{I|L};[VP]{I|L}[PA]EGGVT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[PA]V[{I|L}P]VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RK]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L};[{I|L}P]V[PA]E[KG]E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[PA]VV[{I|L}P]T{I|L};[VP]{I|L}[PA]E[KG]E{I|L} 3.9277;3.7888;2.6524;2.5134;2.1509;1.3654;1.2653;1.1744;1.1263 -;+;-;-;-;-;-;-;- + 178 1 1.207 43374.5 1.0 9621 4871 14486 HBL1_DMSO_200M_050219_2,14494 HBL1_DMSO_200M_050219_2,14494,VPLPAENVTI False True VPLPAENVTI 76.385311 526.804186999798 112480020.0 14486.0 nc|ENSG00000143569|Q14157-1|UBAP2L;;nc|ENSG00000143569|Q14157-4|UBAP2L;;nc|ENSG00000143569|Q14157-5|UBAP2L;;nc|ENSG00000143569|Q14157-3|UBAP2L;;ENSG00000143569|ENST00000428931|UBAP2L 5.084938685099284 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14495 76.387 73.0 1231100.0 25 0 191540.0 40701 VLGFALIV 8 79 416.2705048077563 830.5264566823126 2 416.2706176638603 MULTI CID FTMS 0 0 0 14486 922669.1875 0.0771762654105706 -3 0.2717132568359375 9 Unmodified _VLGFALIV_ ENSG00000091262|ENST00000205557|ABCC6;ENST00000574094.5_1_16:16275679-16317348:-|nuORF;nc|ENSG00000091262|O95255-3|ABCC6 32.45364647766026 0.3613649037604678 4 [{I|L}V]P[K{I|L}]YV 7 4 + 33.261 0.0 0.0 4.0048 4.0048 73.651 0.0 0.0 0.0 9.793191455385395 1.3819008224226792 1.3819008224226792 5.919241470731151 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V]P[K{I|L}]YV;[{I|L}V]G{M(Oxidation (M))|F}[{I|L}A][{I|L}V];[KP]{I|L}YV[{I|L}V];[Y{I|L}][KP]V[{I|L}V];[KP]Y{I|L}V[{I|L}V] 4.0048;3.2921;2.5544;2.4928;1.8295 -;+;-;-;- + 92 + 1 1.207 74988.5 1.0 9622 4871 14486 HBL1_DMSO_200M_050219_2,14495 HBL1_DMSO_200M_050219_2,14495,VLGFALIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14496 76.388 50.0 459670.0 25 0 36810.0 44240 YLIETKNILT 10 52 604.3481425083728 1206.6817320835455 2 604.3484985232353 MULTI CID FTMS 0 0 0 14486 799581.0625 0.9752925028178232 2 -0.215240478515625 10 Unmodified _YLIETKNILT_ ENSG00000171657|ENST00000302548|GPR82 1.3295316138638542 0.7204866299213272 4 {I|L} 1 9 10.969 0.0 0.0 0.90903 0.0 0.0 1075.5867136282704 0.0 1075.5867136282704 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.90903 + + 6 + 1 1.207 21674.0 1.0 9623 4871 14486 HBL1_DMSO_200M_050219_2,14496 HBL1_DMSO_200M_050219_2,14496,YLIETKNILT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14497 76.39 89.0 698350.0 25 0 111230.0 + -1 VLCRLVCLSI 10 74 588.3352689514177 1174.6559849696353 2 588.3356201052666 MULTI CID FTMS 0 0 0 14486 593124.3125 0.9149411313274664 -1 0.12286376953125 11 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))RLVCLSI_ REV__ENST00000447069.5_3_2:201677557-201677948:+|nuORF 3.944395688203298 0.708391353636983 4 V 1 -1 0.48455 0.0 0.0 0.04125 0.0 0.0 587.4165573346728 485.1444185846313 1072.5609759193042 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.04125 + + 1 + 1 1.207 52473.5 1.0 9624 4871 14486 HBL1_DMSO_200M_050219_2,14497 HBL1_DMSO_200M_050219_2,14497,VLCRLVCLSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14498 76.394 206.0 523970.0 25 0 96220.0 + 17506 KPGVTHIIFRA 11 95 619.8692950800139 1237.7240372268277 2 619.8695556521416 MULTI CID FTMS 0 0 0 14486 564009.1875 0.7451657293756407 -1 0.12286376953125 12 Unmodified _KPGVTHIIFRA_ REV__ENSG00000196505|ENST00000369443|GDAP2;REV__ENST00000369442.3_1_1:118455226-118455283:-|nuORF;REV__ENST00000493555.5_1_1:118439453-118462815:-|nuORF;REV__nc|ENSG00000196505|Q9NXN4-2|GDAP2 2.735195868890462 0.8622431031272658 4 [KP]{I|L}Y 4 -1 6.9112 0.0 0.0 0.55838 0.0 0.0 0.0 733.4066293501277 733.4066293501277 2.931825014007217 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [KP]{I|L}Y 0.55838 - 23 1 1.207 83713.4 1.0 9625 4871 14486 HBL1_DMSO_200M_050219_2,14498 HBL1_DMSO_200M_050219_2,14498,KPGVTHIIFRA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14499 76.396 74.0 1323100.0 25 0 96404.0 + 12762 GVPEWFHGA 9 91 500.2378183632048 998.4610837932096 2 500.2379638552666 MULTI CID FTMS 0 0 0 14486 543256.1875 0.2441653516570245 -2 0.2250900268554687 13 Unmodified _GVPEWFHGA_ ENSG00000196684|ENST00000613986|HSH2D 32.116972079565 0.1225432171549407 4 RPEG{M(Oxidation (M))|F}EHQ 8 6 + 62.459 0.0 0.0 6.2555 6.2555 76.234 0.0 0.0 0.0 42.27151575501226 7.038499229805964 7.038499229805964 1.7609125905568137 0 0.2614393726401688 0.0 0.2887254899964357 0.3494850021680094 RPEG{M(Oxidation (M))|F}EHQ;[VG]PEW{M(Oxidation (M))|F}HQ;[VG]PW{M(Oxidation (M))|F}EHQ;RPEGE{M(Oxidation (M))|F}HQ;[VG]PWE{M(Oxidation (M))|F}HQ;[VG]{[CA]|SS}HT{M(Oxidation (M))|F}HQ;[VG]PE[Q{I|L}][DN]Q;[VG]{[CA]|SS}H[YN][HV];RP[C(Carbamidomethyl (C))C][KA]HQ;R{[CA]|SS}HR[DN]Q 6.2555;6.0792;6.0306;5.954;5.7291;4.1138;3.0972;1.8275;1.617;1.2855 -;-;-;-;-;-;-;-;-;- 583 + 1 1.207 84576.5 1.0 9626 4871 14486 HBL1_DMSO_200M_050219_2,14499 HBL1_DMSO_200M_050219_2,14499,GVPEWFHGA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14500 76.398 74.0 774790.0 25 0 37616.0 + -1 PLMLLQVPM 9 104 537.2898621748571 0 537.2879516482353 PEAK CID FTMS 0 0 0 14486 552766.0625 0.4480367452403558 -7 0.6090164184570312 14 2 Oxidation (M) _PLM(Oxidation (M))LLQVPM(Oxidation (M))_ REV__ENST00000344692.7_1_8:144356972-144357419:+|nuORF 32.116972079565 0.1004713836468113 4 P{I|L}{I|L}P 4 -1 20.776 0.0 0.0 1.9371 0.0 0.0 392.1725455393642 257.09345422916255 649.2659997685267 0.0 0.0 0.0 0.0 0 0.75 0.0 0.0 0.0 P{I|L}{I|L}P 1.9371 - 116 + 1 1.207 50638.6 1.0 9627 4871 14486 HBL1_DMSO_200M_050219_2,14500 HBL1_DMSO_200M_050219_2,14500,PLMLLQVPM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14501 76.4 108.0 639340.0 25 0 39707.0 -1 VGARDLFMASC 11 113 593.2727069774936 1184.5308610217871 2 593.2736083865166 MULTI CID FTMS 0 0 0 14486 508851.5 0.4107510553036101 1 -0.0638046264648437 15 Oxidation (M) _VGARDLFM(Oxidation (M))ASC_ nc|ENSG00000143951|O95876-2|WDPCP 15.738622578938676 0.707765323811713 4 [YC(Carbamidomethyl (C))]C{M(Oxidation (M))|F}{I|L}D 6 -1 26.502 0.0 0.0 2.2373 0.0 0.0 0.0 380.20575891666255 380.20575891666255 10.259621790487683 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 [YC(Carbamidomethyl (C))]C{M(Oxidation (M))|F}{I|L}D 2.2373 - 86 + 1 1.207 56340.1 1.0 9628 4871 14486 HBL1_DMSO_200M_050219_2,14501 HBL1_DMSO_200M_050219_2,14501,VGARDLFMASC False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 14502 76.402 109.0 698660.0 25 0 66620.0 + + 29711 GSVERLLGV 9 120 465.2765020370155 928.5384511408312 2 465.2761108279228 MULTI CID FTMS 0 0 0 14486 385796.4375 0.246729350975263 -3 0.2717132568359375 16 Unmodified _QPKFLPLS_ ENSG00000143374|ENST00000369064|TARS2;nc|ENSG00000143374|Q9BW92-2|TARS2 36.04419817259434 0.3004715606373109 4 [QP]{M(Oxidation (M))|F}K{I|L}PS{I|L} 8 -1 + 32.735 0.0 0.0 3.5254 3.5254 70.311 0.0 0.0 0.0 4.608930019204873 4.259687322722812 4.259687322722812 4.259687322722812 0 0.2134679910804404 0.0 1.4436726795685342 0.0 [QP]{M(Oxidation (M))|F}K{I|L}PS{I|L};[QP]{M(Oxidation (M))|F}K{I|L}PTV;{[TV]|[{I|L}S]}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}R;{[TV]|[{I|L}S]}P[KC]{I|L}{I|L}[VG];[QP]{M(Oxidation (M))|F}K{I|L}SP{I|L};{[TV]|[{I|L}S]}P{I|L}[KC]{I|L}[VG];{[TV]|[{I|L}S]}AV[DG]V{I|L}R;[QP]{M(Oxidation (M))|F}K{I|L}TPV;[{I|L}P]S[KC]{I|L}{I|L}[VG];[{I|L}T]T{I|L}HV[{M(Oxidation (M))|F}V] 3.5254;3.0666;2.1471;1.9071;1.7142;1.6454;1.5553;1.3315;1.1766;1.1763 -;-;-;-;-;-;-;-;-;- 670 + 1 1.207 64525.4 1.0 9629 4871 14486 HBL1_DMSO_200M_050219_2,14502 HBL1_DMSO_200M_050219_2,14502,QPKFLPLS False False GSVERLLGV 76.402303 465.276110827923 17277902.0 14486.0 ENSG00000143374|ENST00000369064|TARS2;;nc|ENSG00000143374|Q9BW92-2|TARS2 1.9331871966520944 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14503 76.405 115.0 387370.0 25 0 36903.0 + -1 MLTLEDGTCLT 11 82 606.7761965509467 1211.5378401686933 2 606.7765991091728 MULTI CID FTMS 0 0 0 14486 361952.09375 0.7486927977195977 1 -0.0638046264648437 17 Oxidation (M) _M(Oxidation (M))LTLEDGTCLT_ REV__ENSG00000141441|ENST00000269209|GAREM1;REV__nc|ENSG00000141441|Q9H706-2|GAREM1;REV__nc|ENSG00000141441|Q9H706-3|GAREM1 13.90604991867851 0.7458848613461305 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}[HN]{I|L}{I|L} 8 -1 27.172 0.0 0.0 2.2427 0.0 0.0 0.0 257.0090169054112 257.0090169054112 6.681985352060664 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.9247425010840048 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L}[HN]{I|L}{I|L} 2.2427 - 282 1 1.207 38402.8 1.0 9630 4871 14486 HBL1_DMSO_200M_050219_2,14503 HBL1_DMSO_200M_050219_2,14503,MLTLEDGTCLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14504 76.409 252.0 420210.0 25 0 79999.0 + 4985 DGRVLVVI 8 88 435.77403981392246 869.5335266946449 2 435.7741577029228 MULTI CID FTMS 0 0 0 14486 330199.0625 0.701134290185114 -1 0.12286376953125 18 Unmodified _DGRVLVVI_ ENSG00000111371|ENST00000398637|SLC38A1 29.081581746732265 0.4323690340403521 4 [Q{I|L}]W{I|L}VV{I|L} 7 4 + 41.326 0.0 0.0 4.7527 4.7527 68.895 0.0 0.0 0.0 1.2013985372653124 11.72396080578789 1.2013985372653124 1.2013985372653124 0 0.9247425010840048 0.0 0.0 0.3252574989159953 [Q{I|L}]W{I|L}VV{I|L};[KQ][NG]{I|L}VV{I|L} 4.7527;4.6145 -;- 147 1 1.207 85046.8 1.0 9631 4871 14486 HBL1_DMSO_200M_050219_2,14504 HBL1_DMSO_200M_050219_2,14504,DGRVLVVI False True DGRVLVVI 76.409409 435.774157702923 3673294.0 14486.0 ENSG00000111371|ENST00000398637|SLC38A1 3.436227560043335 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14505 76.423 782.0 364560.0 25 0 33866.0 14307 IELPLTNPEL 10 201 380.2171329626801 1137.6295694882403 3 380.2169677615166 MULTI CID FTMS 0 0 0 14486 313322.125 1.0 0 0.0 19 Unmodified _IELPLTNPEL_ ENSG00000100519|ENST00000445930|PSMC6;ENST00000458604.6_1_14:53173986-53184887:+|nuORF;ENST00000557085.1_1_14:53177833-53180694:+|nuORF 24.95707706330732 0.4079579053029958 4 P[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}{I|L}Q{I|L}{I|L} 8 8 35.923 0.0 0.0 3.1577 0.0 0.0 85.08987624336093 0.0 85.08987624336093 0.0 19.724797210082343 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 P[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}{I|L}Q{I|L}{I|L} 3.1577 - 627 1 1.207 224973.4 1.0 9632 4871 14486 HBL1_DMSO_200M_050219_2,14505 HBL1_DMSO_200M_050219_2,14505,IELPLTNPEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14506 76.436 780.0 147140.0 25 0 14807.0 -1 0 123 745.3348374050809 2232.9826828154423 3 745.6696044802666 MULTI CID FTMS 0 0 0 14486 186299.25 1.0 0 0.0 20 4 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}NYQQNA{M(Oxidation (M))|F}Y 11 -1 68.369 0.0 0.0 3.0618 0.0 0.0 0.0 827.3858559934298 827.3858559934298 51.35132706372278 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 1.274227503252014 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}NYQQNA{M(Oxidation (M))|F}Y 3.0618 - 4277 1 1.207 86307.2 1.0 9633 4871 14486 HBL1_DMSO_200M_050219_2,14506 HBL1_DMSO_200M_050219_2,14506, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14508 76.442 101.0 517250.0 25 0 78879.0 + 43700 YAYDGKDYLAL 11 75 646.3140641308695 1290.613575328539 2 646.3142578005791 MULTI CID FTMS 0 0 0 14507 541512.8125 0.1327334639679148 3 -0.33367919921875 1 Unmodified _YAYDGKDYLAL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 30.7034409873982 0.3712764582118616 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}[{I|L}A] 11 5 + 47.707 0.0 0.0 3.6965 3.6965 47.743 0.0 0.0 0.0 12.231301212503745 13.33490911004332 12.231301212503745 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DY{I|L}AY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAYA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}Y[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WR]DYAY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]{I|L}DYAY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]D{I|L}YAY[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAYY{I|L}[{I|L}A];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAYYA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAY{I|L}Y[{I|L}A] 3.6965;3.6965;3.4775;3.4632;3.3589;3.3268;3.3268;3.1549;2.936;2.9217 -;-;-;-;-;-;-;-;-;- 805 1 1.215 47749.2 1.0 9634 4872 14507 HBL1_DMSO_200M_050219_2,14508 HBL1_DMSO_200M_050219_2,14508,YAYDGKDYLAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14509 76.443 50.0 1360800.0 25 0 142290.0 + 32272 RWPDYVREL 9 73 411.88402130637087 1232.6302345193126 3 411.8841125369072 MULTI CID FTMS 0 0 0 14507 906241.5 0.7853569952241181 -2 0.1866683959960937 2 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 41.95555342248728 0.0647214845423414 4 [WR]PDY 5 4 40.898 0.0 0.0 3.3179 0.0 0.0 0.0 512.283291742085 512.283291742085 22.749452898318125 0.0 0.0 0.0 0 1.3182503180159344 1.6989700043360187 0.0 0.5752574989159953 + [WR]PDY 3.3179 + + 109 1 1.215 59362.5 1.0 9635 4872 14507 HBL1_DMSO_200M_050219_2,14509 HBL1_DMSO_200M_050219_2,14509,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14510 76.445 63.0 940070.0 25 0 133850.0 + 18500 KYPDYEVTW 9 82 600.7823490005167 1199.5501450678332 2 600.7827026247978 MULTI CID FTMS 0 0 0 14507 818214.0625 0.9335746576261216 1 -0.1514358520507812 3 Unmodified _KYPDYEVTW_ ENSG00000054148|ENST00000247665|PHPT1 32.78568957990786 0.1150597335874693 4 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E[YK]VTW 9 5 + 60.098 0.0 0.0 5.0101 5.0101 68.253 0.0 0.0 0.0 6.575773191777934 9.208187539523747 6.575773191777934 0.3123468415207497 0 0.9247425010840048 0.958607314841775 1.1421590589602533 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E[YK]VTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EV[YK]TW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EVT[YK]W;[DP]YE[YK]VTW;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}VTW;[DP]YEV[YK]TW;[DP]YEVT[YK]W;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K[YE]VTW;[YE]DP[YK]VTW;[YE]DPV[YK]TW 5.0101;4.984;4.9213;4.4619;4.4417;4.4358;4.3731;4.1908;3.8132;3.7871 -;-;-;-;-;-;-;-;-;- 529 1 1.215 46943.7 1.0 9636 4872 14507 HBL1_DMSO_200M_050219_2,14510 HBL1_DMSO_200M_050219_2,14510,KYPDYEVTW True True KYPDYEVTW 76.445015 600.782702624798 18020660.0 14507.0 ENSG00000054148|ENST00000247665|PHPT1 6.100204308827718 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14511 76.446 42.0 896560.0 25 0 146280.0 + 25100 MPYGSLYNV 9 75 522.2462041420782 1042.4778553509564 2 522.2472411990166 MULTI CID FTMS 0 0 0 14507 778344.375 0.8951392329072282 1 -0.1514358520507812 4 Unmodified _MPYGSLYNV_ ENSG00000166333|ENST00000299421|ILK;nc|ENSG00000166333|Q13418-2|ILK;nc|ENSG00000166333|Q13418-3|ILK 38.15118350030904 0.0856056900103839 4 {I|L}[SG]C(Carbamidomethyl (C))NV 6 5 28.166 0.0 0.0 2.7018 0.0 0.0 394.1825805480251 0.0 394.1825805480251 0.0 17.196596782814808 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.5 {I|L}[SG]C(Carbamidomethyl (C))NV 2.7018 - 132 + 1 1.215 37307.8 1.0 9637 4872 14507 HBL1_DMSO_200M_050219_2,14511 HBL1_DMSO_200M_050219_2,14511,MPYGSLYNV True True MPYGSLYNV 76.446213 522.247241199017 17401908.0 14507.0 nc|ENSG00000166333|Q13418-3|ILK;;ENSG00000166333|ENST00000299421|ILK;;nc|ENSG00000166333|Q13418-2|ILK 6.92282247543335 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14512 76.448 81.0 869580.0 25 0 85910.0 + + 44045 RQLEVLQSI 9 99 543.3193218924204 1084.6240908516406 2 543.3199951052666 MULTI CID FTMS 0 0 0 14507 384908.875 0.3734924933584773 2 -0.231719970703125 5 Unmodified _YILHVLQSL_ ENSG00000157456|ENST00000288207|CCNB2 36.04419817259434 0.0971720506436186 4 [Q{I|L}]REV{I|L}QS{I|L} 9 -1 + 53.879 0.0 0.0 4.9675 4.9675 81.301 0.0 0.0 0.0 4.762036441594191 26.65083033826945 4.762036441594191 9.208187539523747 0 0.8807196863200843 0.0 0.0 0.0 [Q{I|L}]REV{I|L}QS{I|L};[Q{I|L}]REV{I|L}[AG]S{I|L};{[TV]|[{I|L}S]}Q[R{I|L}]{I|L}QD{I|L};{[TV]|[{I|L}S]}Q[R{I|L}]{I|L}[AG]D{I|L};[Q{I|L}]S[R{I|L}]{I|L}QD{I|L};{[QS]|[NT]}{I|L}[R{I|L}]{I|L}QD{I|L};{[TV]|[{I|L}S]}[AG][R{I|L}]{I|L}QD{I|L};[Q{I|L}]R{[TV]|[{I|L}S]}{I|L}QD{I|L};[Q{I|L}]S[R{I|L}]{I|L}[AG]D{I|L};{[QS]|[NT]}{I|L}[R{I|L}]{I|L}[AG]D{I|L} 4.9675;4.1186;3.4238;2.5748;2.5018;2.3494;2.2526;1.898;1.6529;1.5004 -;-;-;-;-;-;-;-;-;- 371 1 1.215 59010.4 1.0 9638 4872 14507 HBL1_DMSO_200M_050219_2,14512 HBL1_DMSO_200M_050219_2,14512,YILHVLQSL False False RQLEVLQSI 76.448059 543.319995105267 13681683.0 14507.0 ENSG00000157456|ENST00000288207|CCNB2 3.615163564682007 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14513 76.45 93.0 967350.0 25 0 108340.0 + 36578 TALLKIEGV 9 111 472.2949192706823 942.5752856081646 2 472.2969848513603 MULTI CID FTMS 0 0 0 14507 399130.625 0.0607376024183611 -2 0.1866683959960937 6 Unmodified _TALLKIEGV_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000329092.12_1_3:197677808-197679492:+|nuORF;ENST00000478069.1_1_4:95290987-95291311:+|nuORF;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 53.832793166522166 0.0319663582346103 4 [TA]{I|L}{I|L}K{I|L}EGV 9 0 + 69.789 0.0 0.0 7.4041 7.4041 88.034 0.0 0.0 0.0 26.80843729112334 7.289332277134619 7.289332277134619 7.289332277134619 0 1.1549471895720984 2.0 0.7059771852360797 0.0 + + [TA]{I|L}{I|L}K{I|L}EGV;[TA]{I|L}{I|L}K{I|L}[DG]{I|L};[R{M(Oxidation (M))|F}]{I|L}K{I|L}{I|L}[PG];{I|L}{I|L}K{M(Oxidation (M))|F}R{I|L}[PG];[K{I|L}][R{M(Oxidation (M))|F}]{I|L}{I|L}[PG];[K{I|L}]{I|L}{M(Oxidation (M))|F}R{I|L}[PG];{I|L}{I|L}K{I|L}[R{M(Oxidation (M))|F}][PG];[K{I|L}]{I|L}{I|L}[R{M(Oxidation (M))|F}][PG] 7.4041;6.6308;3.9692;3.7786;3.3117;3.1399;2.8564;2.2176 +;-;-;-;-;-;-;- + 550 + 1 1.215 72902.4 1.0 9639 4872 14507 HBL1_DMSO_200M_050219_2,14513 HBL1_DMSO_200M_050219_2,14513,TALLKIEGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14514 76.452 110.0 785000.0 25 0 61107.0 + 2432 AQRFGEVSL 9 116 503.77043923436906 1005.526325535538 2 503.7707702517509 MULTI CID FTMS 0 0 0 14507 308300.40625 0.0960224567825542 -2 0.1866683959960937 7 Unmodified _AQRFGEVSL_ REV__ENSG00000161896|ENST00000293756|IP6K3 15.847184025352805 0.4077185912009129 4 CP{I|L}KG{I|L} 6 -1 19.932 0.0 0.0 1.9822 0.0 0.0 376.1552450685444 0.0 376.1552450685444 0.0 5.644987369960612 0.0 0.0 0 0.0 0.0 0.0 0.0 CP{I|L}KG{I|L} 1.9822 - 441 + 1 1.215 69899.9 1.0 9640 4872 14507 HBL1_DMSO_200M_050219_2,14514 HBL1_DMSO_200M_050219_2,14514,AQRFGEVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14515 76.458 326.0 245380.0 25 0 43990.0 34949 SQKPSRLHLSL 11 101 633.3691586956885 1264.723764458177 2 633.3692504763603 MULTI CID FTMS 0 0 0 14507 264881.28125 0.1316579014861892 -15 1.3648147583007812 8 Unmodified _SQKPSRLHLSL_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|58|2|anti-sense 2.735195868890462 0.8622431031272658 4 {I|L} 1 10 10.0 0.0 0.0 0.79069 0.0 0.0 1133.628517121066 0.0 1133.628517121066 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.79069 + + 39 + 1 1.215 68989.8 1.0 9641 4872 14507 HBL1_DMSO_200M_050219_2,14515 HBL1_DMSO_200M_050219_2,14515,SQKPSRLHLSL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 14516 76.471 716.0 310420.0 25 0 30059.0 + 23358 LTDINIHQEL 10 182 598.3204823688128 1194.6264118044255 2 598.3201171755791 MULTI CID FTMS 0 0 0 14507 245205.640625 1.0 0 0.0 9 Unmodified _LTDINIHQEL_ REV__ENSG00000101974|ENST00000682941|ATP11C;REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF;REV__nc|ENSG00000101974|Q8NB49-2|ATP11C;REV__nc|ENSG00000101974|Q8NB49-3|ATP11C;REV__nc|ENSG00000101974|Q8NB49-4|ATP11C;REV__nc|ENSG00000101974|Q8NB49|ATP11C 41.8396318013385 0.1381409678234242 4 [{I|L}T]RSDYN{I|L}T{I|L} 10 -1 + 100.42 0.0 0.0 8.4056 8.4056 91.863 0.0 0.0 0.0 16.020599913279625 90.9520456661748 16.020599913279625 9.164539485499262 0 0.8807196863200843 1.5228787452803376 1.0189301784845295 0.805462187404089 [{I|L}T]RSDYN{I|L}T{I|L};[{I|L}T]RSDYGG{I|L}T{I|L};[{I|L}T]RSDY[KA]E{I|L};[{I|L}T]N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YN{I|L}T{I|L};[{I|L}T]N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YGG{I|L}T{I|L};[{I|L}T]GG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YN{I|L}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YN{I|L}T{I|L};{[TV]|[{I|L}S]}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YN{I|L}T{I|L};{[TV]|[{I|L}S]}V{[WS]|[C(Carbamidomethyl (C)){I|L}]}YN{I|L}T{I|L};[{I|L}T]N[TA][WY]{I|L}T{I|L} 8.4056;7.6385;6.6289;6.4516;5.6844;5.6844;5.1908;4.9361;4.7738;4.7346 -;-;-;-;-;-;-;-;-;- 966 1 1.215 165051.3 1.0 9642 4872 14507 HBL1_DMSO_200M_050219_2,14516 HBL1_DMSO_200M_050219_2,14516,LTDINIHQEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14517 76.473 96.0 777250.0 25 0 106800.0 + + -1 AALDFKLAAA 10 114 495.78706690171913 0 495.7877075076103 PEAK CID FTMS 0 0 0 14507 219771.640625 0.7143347960247811 -1 0.0638046264648437 10 Oxidation (M) _IAAKNM(Oxidation (M))ITL_ nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-5|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000131503|Q8IWZ3-3|ANKHD1;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-2|ANKHD1 32.30548876998284 0.0995446103270859 4 {I|L}DK{I|L} 4 -1 26.107 0.0 0.0 2.6382 0.0 0.0 142.08254337199452 375.1792086236938 517.2617519956883 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.2887254899964357 0.0 {I|L}DK{I|L} 2.6382 - 851 + 1 1.215 63537.2 1.0 9643 4872 14507 HBL1_DMSO_200M_050219_2,14517 HBL1_DMSO_200M_050219_2,14517,IAAKNMITL False False AALDFKLAAA 76.47285 495.78770750761 428665.84375 14507.0 nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-5|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-3|ANKHD1;;ENSG00000131503|ENST00000360839|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-2|ANKHD1 3.364979982376098 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14518 76.487 799.0 112040.0 25 0 6242.4 + -1 FFFYCLFCFVI 11 112 781.8650155961902 1561.7154782591804 2 782.3674804568291 MULTI CID FTMS 0 0 0 14507 177171.125 1.0 0 0.0 11 2 Carbamidomethyl (C) _FFFYC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))FVI_ REV__ENSG00000164197|ENST00000389100|RNF180 1.4819007175156935 0.86815623132643 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YE 11 -1 57.757 0.0 0.0 3.6983 0.0 0.0 0.0 226.1378117019798 226.1378117019798 35.80130748926923 0.0 0.0 0.0 0 0.2614393726401688 1.2218487496163564 0.0 1.048455006504028 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YE 3.6983 - 1399 1 1.215 68191.2 1.0 9644 4872 14507 HBL1_DMSO_200M_050219_2,14518 HBL1_DMSO_200M_050219_2,14518,FFFYCLFCFVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14519 76.501 800.0 98300.0 25 0 23321.0 + 26649 NYFCRNEMS 9 52 1163.4621722170982 1162.4548957504985 1 1163.470263659954 MULTI CID FTMS 0 0 0 14507 174459.140625 0.6695856154580968 11 -1.099273681640625 12 Unmodified _NYFCRNEMS_ REV__ENSG00000113924|ENST00000283871|HGD 1.844237919475145 0.850302753031785 4 E 1 -1 6.9897 0.0 0.0 0.60129 0.0 0.0 506.2279731868346 524.1643770807249 1030.3923502675596 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.60129 + + 3 + 1 1.215 66990.9 0.8700000047683716 9645 4872 14507 HBL1_DMSO_200M_050219_2,14519 HBL1_DMSO_200M_050219_2,14519,NYFCRNEMS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14520 76.509 453.0 509540.0 25 0 55851.0 + + -1 ILLDERGQIKL 11 147 432.9338699350302 1295.7797804052907 3 433.2667114138603 MULTI CID FTMS 0 0 0 14507 140224.53125 0.2774213551848513 -4 0.3355178833007812 13 Carbamidomethyl (C) _KPLVVPKSC(Carbamidomethyl (C))IR_ ENST00000468058.1_1_19:7975099-7977313:+|nuORF;nc|ENSG00000076984|O14733-3|MAP2K7;nc|ENSG00000076984|O14733-2|MAP2K7;nc|ENSG00000076984|O14733-4|MAP2K7;ENSG00000076984|ENST00000397979|MAP2K7 12.227587767072771 0.7807987299068186 4 {NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}{I|L}D{I|L}{I|L}K[KP] 11 -1 + 26.367 0.0 0.0 2.0348 2.0348 67.265 0.0 0.0 0.0 0.5745182762703038 2.4389709239288173 0.5745182762703038 3.979400086720375 0 0.0 0.8538719643217619 0.0 0.566901560044258 {NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}{I|L}D{I|L}{I|L}K[KP];{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}{I|L}D{I|L}K{I|L}[KP];{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}D{I|L}{I|L}{I|L}K[KP];{I|L}{I|L}{[WN]|[YH]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}R[KP];{I|L}{I|L}{[WN]|[YH]}[SG]{I|L}{I|L}R[KP];{I|L}{I|L}[RD][WQ]{I|L}K[KP];{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}D{I|L}{I|L}K{I|L}[KP];{I|L}{I|L}{[WN]|[YH]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}R{I|L}[KP];{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}{I|L}S{I|L}{I|L}R[KP];{I|L}{I|L}{[WN]|[YH]}[SG]{I|L}R{I|L}[KP] 2.0348;1.7277;1.4954;1.3852;1.3533;1.1976;1.1883;1.0781;1.0613;1.0462 -;-;-;-;-;-;-;-;-;- 984 1 1.215 198230.1 1.0 9646 4872 14507 HBL1_DMSO_200M_050219_2,14520 HBL1_DMSO_200M_050219_2,14520,KPLVVPKSCIR False False ILLDERGQIKL 76.508581 433.26671141386 5587158.5 14507.0 ENST00000468058.1_1_19:7975099-7977313:+|nuORF;;nc|ENSG00000076984|O14733-3|MAP2K7;;nc|ENSG00000076984|O14733-2|MAP2K7;;nc|ENSG00000076984|O14733-4|MAP2K7;;ENSG00000076984|ENST00000397979|MAP2K7 3.429473161697388 3.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14521 76.522 800.0 62741.0 25 0 13869.0 -1 0 43 1147.142260730267 0 1147.142260730267 PEAK CID FTMS 0 0 0 -1 0 14 4 SVG 3 -1 12.307 0.0 0.0 0.5369 0.0 0.0 1326.8515858142466 719.2778414361936 2046.12942725044 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SVG 0.5369 - 36 + 1 1.215 45953.1 0.8299999833106995 9647 4872 14507 HBL1_DMSO_200M_050219_2,14521 HBL1_DMSO_200M_050219_2,14521, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14522 76.538 800.0 220520.0 25 0 29504.0 -1 0 157 643.2932280314228 1926.857854694468 3 643.6282836794853 MULTI CID FTMS 0 0 0 14507 113581.3203125 1.0 0 0.0 15 4 [{I|L}T]A{I|L}Q 5 -1 24.169 0.0 0.0 1.2543 0.0 0.0 0.0 1397.514689981831 1397.514689981831 6.663004455312198 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.5752574989159953 0.0 [{I|L}T]A{I|L}Q 1.2543 - 3834 1 1.215 137009.7 0.8999999761581421 9648 4872 14507 HBL1_DMSO_200M_050219_2,14522 HBL1_DMSO_200M_050219_2,14522, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14523 76.552 800.0 283320.0 25 0 25713.0 + 11869 PTVPDLPGV 9 205 448.2528085691364 0 448.2509033083916 PEAK CID FTMS 0 0 0 14507 121953.09375 1.0 0 0.0 16 Unmodified _GLTAHGINI_ ENST00000520771.1_1_8:125565235-125568613:-|nuORF;nc|ENSG00000170873|O43312-4|MTSS1;ENSG00000170873|ENST00000518547|MTSS1;nc|ENSG00000170873|O43312-2|MTSS1;nc|ENSG00000170873|O43312-5|MTSS1 23.1484247019978 0.1725298825155634 4 {I|L}[HT]EG 5 6 7.9761 0.0 0.0 0.8917 0.0 0.0 272.15789274773744 82.06700311832265 354.2248958660601 0.0 0.0 0.0 0.0 0 0.0 0.0 0.566901560044258 0.0 {I|L}[HT]EG 0.8917 - 393 + 1 1.215 171971.1 0.6200000047683716 9649 4872 14507 HBL1_DMSO_200M_050219_2,14523 HBL1_DMSO_200M_050219_2,14523,GLTAHGINI False False PTVPDLPGV 76.551546 448.250903308392 1841575.125 14507.0 ENST00000520771.1_1_8:125565235-125568613:-|nuORF;;nc|ENSG00000170873|O43312-4|MTSS1;;ENSG00000170873|ENST00000518547|MTSS1;;nc|ENSG00000170873|O43312-2|MTSS1;;nc|ENSG00000170873|O43312-5|MTSS1 -0.4073795676231384 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14524 76.555 96.0 758740.0 25 0 89575.0 + 12392 GTIGGGIFQA 10 105 460.74538138012485 919.4762098270496 2 460.7455627322197 MULTI CID FTMS 0 0 0 14507 111120.2890625 0.0822814372612614 -2 0.1866683959960937 17 Unmodified _GTIGGGIFQA_ ENSG00000134375|ENST00000367287|TIMM17A;ENST00000478378.5_1_1:201924654-201931951:+|nuORF;ENST00000484647.1_1_1:201924654-201926725:+|nuORF 52.268347100219714 0.0668375294751462 4 QKWA 4 9 24.97 0.0 0.0 2.7157 0.0 0.0 388.1940575827122 0.0 388.1940575827122 0.0 10.557873875251593 0.0 0.0 0 0.0 0.0 0.0 0.4793036574208875 QKWA 2.7157 - 487 + 1 1.215 61952.8 1.0 9650 4872 14507 HBL1_DMSO_200M_050219_2,14524 HBL1_DMSO_200M_050219_2,14524,GTIGGGIFQA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14525 76.569 800.0 312180.0 25 0 9741.2 -1 0 150 914.9430276708893 1827.8715024085784 2 914.9467651247978 MULTI CID FTMS 0 0 0 14507 108527.03125 0.7575090485279422 -1 0.0638046264648437 18 4 {[DA]|[EG]}VANA{I|L}E{I|L}R 10 -1 86.639 0.0 0.0 4.7399 0.0 0.0 0.0 772.2778494146909 772.2778494146909 52.192489407922245 0.0 0.0 0.0 0 0.5 1.2218487496163564 1.2803695511246982 1.2416440611282626 {[DA]|[EG]}VANA{I|L}E{I|L}R 4.7399 - 47706 1 1.215 161646.3 0.7099999785423279 9651 4872 14507 HBL1_DMSO_200M_050219_2,14525 HBL1_DMSO_200M_050219_2,14525, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14526 76.582 800.0 99253.0 25 0 6486.4 + 7889 ELNKDILDSLL 11 118 424.906374143601 0 424.9059936404228 PEAK CID FTMS 0 0 0 14507 94762.9921875 1.0 0 0.0 19 Unmodified _ELNKDILDSLL_ REV__ENSG00000076356|ENST00000367033|PLXNA2 14.837902256254086 0.405585171585863 4 {I|L}D{[QG]|[NA]}VV 6 -1 17.154 0.0 0.0 2.0233 0.0 0.0 135.42354461170197 98.02530084781483 233.4488454595168 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {I|L}D{[QG]|[NA]}VV 2.0233 - 205 + 1 1.215 72028.6 0.5899999737739563 9652 4872 14507 HBL1_DMSO_200M_050219_2,14526 HBL1_DMSO_200M_050219_2,14526,ELNKDILDSLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14527 76.588 292.0 430860.0 25 0 29272.0 + 10599 TILEKCFKV 9 145 540.827742913715 1079.64093289423 2 540.8300048708916 MULTI CID FTMS 0 0 0 14507 71111.3359375 1.0 0 0.0 20 Unmodified _FVLEKKFGI_ nc|ENSG00000135336|Q9UBD5-2|ORC3;nc|ENSG00000135336|Q9UBD5-3|ORC3;ENSG00000135336|ENST00000392844|ORC3 25.399314129420983 0.2080152500878129 4 [{I|L}T]HC 4 8 30.177 0.0 0.0 2.7951 0.0 0.0 0.0 622.4081186315167 622.4081186315167 2.821887048146703 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T]HC 2.7951 - 950 1 1.215 100820.6 1.0 9653 4872 14507 HBL1_DMSO_200M_050219_2,14527 HBL1_DMSO_200M_050219_2,14527,FVLEKKFGI False False TILEKCFKV 76.587833 540.830004870892 1302723.625 14507.0 nc|ENSG00000135336|Q9UBD5-2|ORC3;;nc|ENSG00000135336|Q9UBD5-3|ORC3;;ENSG00000135336|ENST00000392844|ORC3 3.091080109278361 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14529 76.592 3.2 18038000.0 25 0 2506200.0 18559 LAADWLPSL 9 77 493.2698609723554 984.5251690115108 2 493.2704955935478 MULTI CID FTMS 0 0 0 14528 15309496.0 0.6319122997378819 1 -0.0802841186523437 1 Unmodified _LAADWLPSL_ ENSG00000242866|ENST00000450892|STRC;nc|ENSG00000290691|A6NGW2|STRCP1 34.10243960390752 0.1078313939113124 4 [{I|L}P][KC]D{I|L}PS{I|L} 9 4 + 51.035 0.0 0.0 5.1837 5.1837 72.801 0.0 0.0 0.0 10.211892990699384 14.775071725447404 10.211892990699384 2.239152941678313 0 1.1435078169319297 1.6989700043360187 0.4247425010840047 0.0 [{I|L}P][KC]D{I|L}PS{I|L};[{I|L}P][KC]{I|L}SPD{I|L};[{I|L}P][KC]{I|L}DPS{I|L};[{I|L}P]C(Carbamidomethyl (C))[VS]{I|L}PS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}D{I|L}PS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}{I|L}SPD{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}{I|L}DPS{I|L};[PS][KG][KG]SPD{I|L};[KP]{[ES]|[DT]|[{I|L}C]}D{I|L}PS{I|L};[VG]{[RE]|[WV]}D{I|L}PS{I|L} 5.1837;4.9562;4.8779;4.7795;4.1464;3.919;3.8407;3.4003;3.1522;3.0842 -;-;-;-;-;-;-;-;-;- 383 1 1.221 48189.8 1.0 9654 4873 14528 HBL1_DMSO_200M_050219_2,14529 HBL1_DMSO_200M_050219_2,14529,LAADWLPSL True False DGLRDLPSI 76.5923 493.270495593548 433697888.0 14528.0 nc|ENSG00000134324|Q14693|LPIN1;;nc|ENSG00000134324|Q14693-4|LPIN1;;nc|ENSG00000134324|Q14693-5|LPIN1;;nc|ENSG00000134324|Q14693-7|LPIN1;;ENSG00000134324|ENST00000674199|LPIN1;;nc|ENSG00000134324|Q14693-2|LPIN1 3.3398322264353437 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14530 76.593 30.0 1547300.0 25 0 362060.0 + 29835 QQLLKRAHVE 10 58 611.3562878849376 1220.6980228366751 2 611.3564330935478 MULTI CID FTMS 0 0 0 14528 1711047.25 0.665271132783343 1 -0.0802841186523437 2 Unmodified _QQLLKRAHVE_ REV__ENSG00000039139|ENST00000265104|DNAH5 1.3295316138638542 0.7204866299213272 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.221 41794.6 1.0 9655 4873 14528 HBL1_DMSO_200M_050219_2,14530 HBL1_DMSO_200M_050219_2,14530,QQLLKRAHVE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14531 76.595 21.0 2744500.0 25 0 434080.0 + 4076 DAMRLYYV 8 78 515.7543466344052 1029.4941403356104 2 515.7553588747978 MULTI CID FTMS 0 0 0 14528 1732079.0 0.45762129945047 -2 0.215240478515625 3 Unmodified _DAMRLYYV_ ENSG00000105258|ENST00000221859|POLR2I;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;ENST00000589591.5_1_19:36604659-36605638:-|nuORF;ENST00000592962.5_1_19:36604659-36605276:-|nuORF 28.49450938151212 0.4447307666967534 4 {[DA]|[EG]}MR{I|L}YYV 8 0 + 50.156 0.0 0.0 4.8719 4.8719 84.491 0.0 0.0 0.0 13.926222739823755 19.064432939913534 13.926222739823755 19.74501035973354 0 1.524227503252014 1.3979400086720375 0.0 0.0 + + {[DA]|[EG]}MR{I|L}YYV;{[ES]|[DT]|[{I|L}C]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YYV;{[ES]|[DT]|[{I|L}C]}[RV]DYYV;{[DA]|[EG]}G[HN][YQ]{I|L}{I|L};{[SA]|[TG]}{[QG]|[NA]}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L}[QP] 4.8719;2.954;2.4905;1.1544;0.18303 +;-;-;-;- + 201 1 1.221 48411.5 1.0 9656 4873 14528 HBL1_DMSO_200M_050219_2,14531 HBL1_DMSO_200M_050219_2,14531,DAMRLYYV False True DAMRLYYV 76.594656 515.755358874798 97908108.0 14528.0 ENST00000592962.5_1_19:36604659-36605276:-|nuORF;;ENSG00000105258|ENST00000221859|POLR2I;;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;;ENST00000589591.5_1_19:36604659-36605638:-|nuORF 7.750316778818767 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14532 76.596 34.0 1675500.0 25 0 208900.0 + 2754 ATLKELTSL 9 91 488.2896683102353 974.5647836872706 2 488.2903625369072 MULTI CID FTMS 0 0 0 14528 1436670.5 0.5133661702184871 -2 0.215240478515625 4 Unmodified _ATLKELTSL_ ENSG00000150459|ENST00000382533|SAP18;ENST00000434334.1_1_2:182559249-182559624:+|nuORF;nc|ENSG00000150459|O00422|SAP18 51.629811660486645 0.0367964933207742 4 [VS]A{I|L}TA{I|L}TS{I|L} 10 5 + 66.186 0.0 0.0 6.7913 6.7913 81.698 0.0 0.0 0.0 3.52182518111362 6.972353285392636 3.52182518111362 3.52182518111362 0 0.8182503180159344 1.6989700043360187 1.5941876774005248 0.0 [VS]A{I|L}TA{I|L}TS{I|L};{[TV]|[{I|L}S]}G{I|L}TA{I|L}TS{I|L};[TA]VVTA{I|L}TS{I|L};[VS]A{I|L}T{I|L}ATS{I|L};{[TV]|[{I|L}S]}G{I|L}T{I|L}ATS{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TA{I|L}TS{I|L};[K{I|L}]ETA{I|L}TS{I|L};[TA]VVT{I|L}ATS{I|L};{[TV]|[{I|L}S]}T{[VA]|[{I|L}G]}A{I|L}TS{I|L};[YR]{I|L}A[RP]S{I|L} 6.7913;6.43;6.1915;5.7829;5.4215;5.3044;5.2701;5.183;5.1391;4.8547 -;-;-;-;-;-;-;-;-;- 891 1 1.221 51252.9 1.0 9657 4873 14528 HBL1_DMSO_200M_050219_2,14532 HBL1_DMSO_200M_050219_2,14532,ATLKELTSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14533 76.597 32.0 1177900.0 25 0 74246.0 + 29780 QPYMPTVSATI 11 82 604.3052610747856 1206.595969216371 2 604.3056518435478 MULTI CID FTMS 0 0 0 14528 1381415.75 0.893315880870695 -1 0.1514358520507812 5 Unmodified _QPYMPTVSATI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENST00000551805.1_1_12:57908749-57909143:+|nuORF 28.181266145913348 0.4304979014012044 4 [{I|L}T]ACM[TP]V{[SA]|[TG]}[{I|L}T] 12 4 + 24.214 0.0 0.0 2.0068 2.0068 62.413 0.0 0.0 0.0 1.4495585356031953 -0.4612142692608465 -0.4612142692608465 1.343789510346511 0 0.0 1.5228787452803376 1.424742501084005 0.0 [{I|L}T]ACM[TP]V{[SA]|[TG]}[{I|L}T];[{I|L}T]ACM[TP][PA][R{M(Oxidation (M))|F}];[{I|L}T]A{[WN]|[YH]}{[WN]|[YH]}[R{M(Oxidation (M))|F}];[TA]{I|L}CM[TP]V{[SA]|[TG]}[{I|L}T];[TA]{I|L}CM[TP][PA][R{M(Oxidation (M))|F}] 2.0068;1.8954;1.582;0.29375;0.18238 -;-;-;-;- 268 1 1.221 33282.0 1.0 9658 4873 14528 HBL1_DMSO_200M_050219_2,14533 HBL1_DMSO_200M_050219_2,14533,QPYMPTVSATI False True QPYMPTVSATI 76.597014 604.305651843548 14544926.0 14528.0 ENST00000537638.6_1_12:57905855-57911076:+|nuORF;;ENST00000551805.1_1_12:57908749-57909143:+|nuORF;;ENSG00000166986|ENST00000262027|MARS1 7.69418207804362 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14534 76.598 35.0 1623000.0 25 0 268420.0 + 31088 RLLEATSYL 9 74 533.2984411584046 1064.582329383609 2 533.3002807497978 MULTI CID FTMS 0 0 0 14528 1366354.625 1.0 0 0.0 6 Unmodified _RLLEATSYL_ ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A 31.26834338654808 0.1333407332142048 4 EATSY{I|L} 6 3 59.954 0.0 0.0 5.6317 0.0 0.0 382.269823142775 0.0 382.269823142775 0.0 42.72160958700539 0.0 0.0 0 0.8807196863200843 0.0 0.8494850021680094 0.0 + EATSY{I|L} 5.6317 + + 69 1 1.221 49875.1 1.0 9659 4873 14528 HBL1_DMSO_200M_050219_2,14534 HBL1_DMSO_200M_050219_2,14534,RLLEATSYL False True RLLEATSYL 76.598193 533.300280749798 12952899.0 14528.0 ENSG00000004487|ENST00000400181|KDM1A;;nc|ENSG00000004487|O60341|KDM1A 6.189511140187581 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14535 76.599 41.0 1354800.0 25 0 188820.0 + 31549 RQLEEEGITFV 11 56 660.8432260978086 1319.6718992624171 2 660.8437988162041 MULTI CID FTMS 0 0 0 14528 1155245.75 0.6182378564179105 1 -0.0802841186523437 7 Unmodified _RQLEEEGITFV_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 17.86316937532769 0.6635724014218961 4 EEG{I|L}T{M(Oxidation (M))|F}V 7 4 57.467 0.0 0.0 4.3546 0.0 0.0 526.2870350568375 0.0 526.2870350568375 0.0 50.47691990337874 0.0 0.0 0 0.5 0.0 0.5 0.0 + EEG{I|L}T{M(Oxidation (M))|F}V 4.3546 + + 169 1 1.221 48566.7 1.0 9660 4873 14528 HBL1_DMSO_200M_050219_2,14535 HBL1_DMSO_200M_050219_2,14535,RQLEEEGITFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14536 76.601 46.0 1182100.0 25 0 138770.0 + -1 QVQDAVMFV 9 99 526.7590065926863 1051.5034602521723 2 526.7599365115166 MULTI CID FTMS 0 0 0 14528 823265.625 0.8192773317442358 -1 0.1514358520507812 8 Oxidation (M) _QVQDAVM(Oxidation (M))FV_ REV__ENST00000423427.1_2_3:173114403-173322094:+|nuORF 16.942295170755138 0.3780752226737986 4 [EC]VK{[WT]|[RM]}TSV 9 -1 + 33.069 0.0 0.0 3.1449 3.1449 64.963 0.0 0.0 0.0 1.760912590556817 10.935815256728254 1.760912590556817 1.760912590556817 0 0.0 0.0 0.25 0.4247425010840047 [EC]VK{[WT]|[RM]}TSV;{[QV]|[N{I|L}]|[RA]|[KV]}[MT]{[WT]|[RM]}TSV;{[QV]|[N{I|L}]|[RA]|[KV]}[WQ]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WQ]{[YD]|[{M(Oxidation (M))|F}M]}T{I|L};[EC]VK{[WT]|[RM]}RM;{[QV]|[N{I|L}]|[RA]|[KV]}[MT]{[WT]|[RM]}RM;[EC]V[{I|L}P]V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V;[EC]V[{I|L}P]{[YD]|[{M(Oxidation (M))|F}M]}T{I|L};[EC]V[{I|L}P]V[YV]M 3.1449;2.9774;2.2911;2.1049;1.7016;1.5342;1.1737;0.98756;0.13055 -;-;-;-;-;-;-;-;- 274 + 1 1.221 52099.9 1.0 9661 4873 14528 HBL1_DMSO_200M_050219_2,14536 HBL1_DMSO_200M_050219_2,14536,QVQDAVMFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14537 76.602 64.0 1085700.0 25 0 215940.0 + 27410 PILSAITWRG 10 81 557.3229876205094 1112.6314223078186 2 557.3239623904228 MULTI CID FTMS 0 0 0 14528 770134.125 1.0 0 0.0 9 Unmodified _PILSAITWRG_ REV__CON__Q28107 21.74664581756881 0.480091245866545 4 [{I|L}P]TG{I|L}P{I|L} 7 -1 34.288 0.0 0.0 3.0817 0.0 0.0 0.0 418.1787605248687 418.1787605248687 19.990692274640907 0.0 0.0 0.0 0 0.0 1.154901959985743 1.055462187404089 0.0 [{I|L}P]TG{I|L}P{I|L} 3.0817 - 225 1 1.221 58130.4 1.0 9662 4873 14528 HBL1_DMSO_200M_050219_2,14537 HBL1_DMSO_200M_050219_2,14537,PILSAITWRG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14538 76.603 40.0 1050300.0 25 0 150270.0 + 34414 SLVIWGCTL 9 73 496.266042412338 0 496.2658874392509 PEAK CID FTMS 0 0 0 14528 660317.6875 0.7277687508679427 -1 0.1514358520507812 10 Unmodified _SLVIWGCTL_ ENSG00000168398|ENST00000554311|BDKRB2;nc|ENSG00000168398|P30411-2|BDKRB2 28.486842064014134 0.1241350795510704 4 TC{I|L} 3 7 29.693 0.0 0.0 2.9977 0.0 0.0 131.09695191276347 539.2595919244749 670.3565438372384 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 TC{I|L} 2.9977 - 51 + 1 1.221 38334.8 1.0 9663 4873 14528 HBL1_DMSO_200M_050219_2,14538 HBL1_DMSO_200M_050219_2,14538,SLVIWGCTL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14539 76.605 57.0 1081200.0 25 0 80554.0 + 34965 SQLEDAIRL 9 99 522.7866207075947 1043.5586884819893 2 522.7865478396416 MULTI CID FTMS 0 0 0 14528 503226.71875 0.2968487487128401 -2 0.215240478515625 11 Unmodified _SQLEDAIRL_ ENSG00000151746|ENST00000652176|BICD1;ENSG00000185963|ENST00000356884|BICD2;nc|ENSG00000151746|Q96G01-3|BICD1;nc|ENSG00000151746|Q96G01-4|BICD1;nc|ENSG00000185963|Q8TD16|BICD2 34.93206674587334 0.1032771302489716 4 {[QS]|[NT]}{I|L}EDA{I|L}R{I|L} 9 0 + 63.828 0.0 0.0 6.1163 6.1163 90.907 0.0 0.0 0.0 49.84813456081959 7.836455609270629 7.836455609270629 36.251837901751 0 1.0 1.0457574905606752 0.3807196863200844 0.0 + + {[QS]|[NT]}{I|L}EDA{I|L}R{I|L};{[QS]|[NT]}{I|L}[TP][R{M(Oxidation (M))|F}]PV;{[QS]|[NT]}{I|L}[TP]{[ET]|[MV]}R{I|L};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{NN|[MP]|[D{I|L}]|[EV]}C[KP] 6.1163;2.6425;2.2343;0.099514 +;-;-;- + 177 + 1 1.221 53058.6 1.0 9664 4873 14528 HBL1_DMSO_200M_050219_2,14539 HBL1_DMSO_200M_050219_2,14539,SQLEDAIRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14540 76.609 200.0 674230.0 25 0 81391.0 + 32656 SDAIPGLKI 9 111 457.27116340172114 912.5277738702424 2 457.2714416384697 MULTI CID FTMS 0 0 0 14528 487706.03125 0.2471389910968101 -3 0.338104248046875 12 Unmodified _SDAIPGLKI_ ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15 58.6788170122104 0.0268135626297836 4 {[DS]|[MA]|[CV]|TT}A{I|L}PG{I|L}K{I|L} 9 0 + 46.531 0.0 0.0 5.0991 5.0991 77.014 0.0 0.0 0.0 7.147642715192504 4.973246408079497 4.973246408079497 4.973246408079497 0 1.274227503252014 0.0 0.0 0.2396518287104437 + + {[DS]|[MA]|[CV]|TT}A{I|L}PG{I|L}K{I|L};{[DS]|[MA]|[CV]|TT}A{I|L}PG{I|L}{I|L}K;{[DS]|[MA]|[CV]|TT}A{I|L}{I|L}[PG]K{I|L};{[DS]|[MA]|[CV]|TT}A{I|L}{I|L}[PG]{I|L}K 5.0991;4.5541;4.2771;3.7321 +;-;-;- + 265 + 1 1.221 108654.2 1.0 9665 4873 14528 HBL1_DMSO_200M_050219_2,14540 HBL1_DMSO_200M_050219_2,14540,SDAIPGLKI True True SDAIPGLKI 76.608637 457.27144163847 34521280.0 14528.0 nc|ENSG00000121749|Q8TC07|TBC1D15;;ENSG00000121749|ENST00000485960|TBC1D15;;nc|ENSG00000121749|Q8TC07-3|TBC1D15 4.741888523101807 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14541 76.612 178.0 554970.0 25 0 50120.0 + + 3777 AVADHLFKL 9 112 338.5309142791172 1012.5709134375516 3 338.5306884646416 MULTI CID FTMS 0 0 0 14528 341009.90625 0.7825702598521063 -1 0.1514358520507812 13 Unmodified _DAHLFGLKL_ nc|ENSG00000266967|Q9BTE6-2|AARSD1;nc|ENSG00000266967|Q9BTE6-3|AARSD1;ENSG00000266967|ENST00000427569|AARSD1;ENST00000441280.7_1_17:41108193-41116457:-|nuORF;chr17:42957190-42961192|18|13.94|0.0|20.41|-|0|None,PTGES3L-AARSD1|2;ENST00000416949.5_1_17:41109156-41116489:-|nuORF 42.09456458481378 0.0639583784996157 4 {[VA]|[{I|L}G]}{I|L}EGH{M(Oxidation (M))|F}K{I|L} 9 -1 + 58.382 0.0 0.0 5.7657 5.7657 80.64 0.0 0.0 0.0 21.29370928348408 6.53212513775344 6.53212513775344 5.796896906561031 0 0.4802046884880938 2.0 0.4247425010840047 0.25 {[VA]|[{I|L}G]}{I|L}EGH{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}{[DA]|[EG]}H{I|L}{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}{[DA]|[EG]}{I|L}H{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}{I|L}EGH{M(Oxidation (M))|F}{I|L}K;{[VA]|[{I|L}G]}{[DA]|[EG]}H{I|L}{M(Oxidation (M))|F}{I|L}K;{[VA]|[{I|L}G]}{[DA]|[EG]}{I|L}H{M(Oxidation (M))|F}{I|L}K;{[VA]|[{I|L}G]}{I|L}{[HG]|PP}V[RD]{M(Oxidation (M))|F};{[VA]|[{I|L}G]}{I|L}EGH[K{I|L}]{M(Oxidation (M))|F};{[VA]|[{I|L}G]}{[DA]|[EG]}{I|L}H[K{I|L}]{M(Oxidation (M))|F};{[VA]|[{I|L}G]}{[DA]|[EG]}H{I|L}[K{I|L}]{M(Oxidation (M))|F} 5.7657;5.1932;5.1932;5.1206;4.5481;4.5481;3.388;3.1959;2.6234;2.6234 -;-;-;-;-;-;-;-;-;- 390 + 1 1.221 82659.9 1.0 9666 4873 14528 HBL1_DMSO_200M_050219_2,14541 HBL1_DMSO_200M_050219_2,14541,DAHLFGLKL False False AVADHLFKL 76.612085 338.530688464642 3318604.25 14528.0 nc|ENSG00000266967|Q9BTE6-2|AARSD1;;nc|ENSG00000266967|Q9BTE6-3|AARSD1;;ENSG00000266967|ENST00000427569|AARSD1;;ENST00000441280.7_1_17:41108193-41116457:-|nuORF;;chr17:42957190-42961192|18|13.94|0.0|20.41|-|0|None,PTGES3L-AARSD1|2;;ENST00000416949.5_1_17:41109156-41116489:-|nuORF 4.617808739344279 3.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14542 76.624 665.0 391130.0 25 0 19116.0 + 29821 QQLDSKFLEQV 11 197 667.8508862500768 1333.6872195669534 2 667.8519775271416 MULTI CID FTMS 0 0 0 14528 296708.5 0.5059494139683098 -1 0.1514358520507812 14 Unmodified _QQLDSKFLEQV_ ENSG00000115415|ENST00000361099|STAT1;nc|ENSG00000115415|P42224-2|STAT1 94.90867108109512 0.0004917860609384 4 [AG]VPET{M(Oxidation (M))|F}Q{I|L}QT 11 9 68.088 0.0 0.0 5.1052 0.0 0.0 0.0 159.05749213840627 159.05749213840627 16.073007509710898 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.879854553292708 0.3494850021680094 [AG]VPET{M(Oxidation (M))|F}Q{I|L}QT 5.1052 - 112426 1 1.221 189260.7 1.0 9667 4873 14528 HBL1_DMSO_200M_050219_2,14542 HBL1_DMSO_200M_050219_2,14542,QQLDSKFLEQV True True QQLDSKFLEQV 76.62367 667.851977527142 4960173.0 14528.0 nc|ENSG00000115415|P42224-2|STAT1;;ENSG00000115415|ENST00000361099|STAT1 1.959780832131704 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14543 76.626 110.0 444430.0 25 0 41392.0 12090 GQHCIEISSL 10 97 543.7641834626143 0 543.7632934451103 PEAK CID FTMS 0 0 0 14528 271298.75 0.8322981807102772 1 -0.0802841186523437 15 Unmodified _GQHCIEISSL_ ENSG00000128881|ENST00000267890|TTBK2;nc|ENSG00000128881|Q6IQ55-2|TTBK2 14.838274106304384 0.3381107837965078 4 {I|L} 1 9 8.7371 0.0 0.0 0.80488 0.0 0.0 294.1506070601909 675.2522677057249 969.4028747659158 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + {I|L} 0.80488 + + 129 + 1 1.221 44400.6 1.0 9668 4873 14528 HBL1_DMSO_200M_050219_2,14543 HBL1_DMSO_200M_050219_2,14543,GQHCIEISSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14544 76.639 735.0 358020.0 25 0 32452.0 -1 VSIEMDSYEKI 11 167 665.3129965711393 1328.6114402090784 2 665.3137695193291 MULTI CID FTMS 0 0 0 14528 245341.484375 1.0 0 0.0 16 Oxidation (M) _VSIEM(Oxidation (M))DSYEKI_ ENSG00000099338|ENST00000409235|CATSPERG;ENST00000412458.6_1_19:38845366-38860119:+|nuORF;ENST00000471517.5_1_19:38845366-38853372:+|nuORF 27.22323531849824 0.4529927607131788 4 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}AA[WE]WY{I|L} 10 -1 + 74.429 0.0 0.0 5.602 5.602 72.191 0.0 0.0 0.0 0.9776523517604688 0.9776523517604688 0.9776523517604688 0.9776523517604688 0 0.805462187404089 1.5228787452803376 0.75 0.0 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}AA[WE]WY{I|L};[VS]{I|L}ED[WH]D{I|L}C{I|L};[VS]{I|L}ED[WH]{I|L}DC{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}AA[WE]YW{I|L};[VS]{I|L}[HN]NMAD{I|L}C{I|L};[VS]{I|L}[HN]NMA{I|L}DC{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}A[WH]DE{I|L}[PA];[VS]{I|L}S[YN]C(Carbamidomethyl (C))[NP]Y{I|L};{[YD]|[{M(Oxidation (M))|F}M]}A{I|L}A[WE]WY{I|L};[VS]{I|L}{M(Oxidation (M))|F}S[WE]WY{I|L} 5.602;5.5284;5.4847;5.4148;5.2336;5.1899;5.1295;4.9457;4.9223;4.8881 -;-;-;-;-;-;-;-;-;- 10198 1 1.221 192100.6 1.0 9669 4873 14528 HBL1_DMSO_200M_050219_2,14544 HBL1_DMSO_200M_050219_2,14544,VSIEMDSYEKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14545 76.641 128.0 514320.0 25 0 40956.0 + 21971 LPPNLYPTV 9 117 507.2872214241527 1012.5598899151054 2 507.2901183962822 MULTI CID FTMS 0 0 0 14528 253963.703125 0.3333629702882246 12 -1.1885528564453125 17 Unmodified _LPPNLYPTV_ ENSG00000010017|ENST00000011619|RANBP9;nc|ENSG00000010017|Q96S59-3|RANBP9 42.09456458481378 0.0639583784996157 4 {[VA]|[{I|L}G]}W[H{I|L}]{M(Oxidation (M))|F}K{I|L} 8 7 + 42.101 0.0 0.0 4.1579 4.1579 76.535 0.0 0.0 0.0 8.667505541063178 9.0556825010459 8.667505541063178 8.38621460473977 0 0.9247425010840048 2.0 0.0 0.0 {[VA]|[{I|L}G]}W[H{I|L}]{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}{[QG]|[NA]}{I|L}[QT]PS{I|L};{[VA]|[{I|L}G]}{[QG]|[NA]}{I|L}[QT]PTV;{[VA]|[{I|L}G]}{[QG]|[NA]}{I|L}[QT]TPV;[{I|L}T]TYQ{M(Oxidation (M))|F}[K{I|L}];{[VA]|[{I|L}G]}W[H{I|L}][K{I|L}]{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[HA]{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[K{I|L}];{NN|[MP]|[D{I|L}]|[EV]}[HA]{M(Oxidation (M))|F}{[VA]|[{I|L}G]}[K{I|L}] 4.1579;3.3296;3.2635;2.5454;2.4351;2.2084;0.37292;0.075625 -;-;-;-;-;-;-;- 774 + 1 1.221 57198.7 1.0 9670 4873 14528 HBL1_DMSO_200M_050219_2,14545 HBL1_DMSO_200M_050219_2,14545,LPPNLYPTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14546 76.645 180.0 462560.0 25 0 45141.0 + 7825 ELKIKESRE 9 117 566.3222210154946 1130.6298890977891 2 566.3229858279228 MULTI CID FTMS 0 0 0 14528 203013.625 0.3357328490064297 -4 0.4403305053710937 18 Unmodified _ELKIKESRE_ REV__ENSG00000154767|ENST00000285021|XPC;REV__ENST00000455144.6_1_3:14206267-14209863:-|nuORF;REV__nc|ENSG00000154767|Q01831-2|XPC 6.2057823575117 0.6980434486082533 4 W{I|L}{M(Oxidation (M))|F}T 4 -1 14.963 0.0 0.0 1.3234 0.0 0.0 565.3161488263687 0.0 565.3161488263687 0.0 -3.2835405882218662 -3.2835405882218662 0.0 0 0.1150219788552205 0.0 0.0 0.0 W{I|L}{M(Oxidation (M))|F}T 1.3234 - 98 1 1.221 68852.0 1.0 9671 4873 14528 HBL1_DMSO_200M_050219_2,14546 HBL1_DMSO_200M_050219_2,14546,ELKIKESRE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14547 76.653 465.0 333670.0 25 0 33997.0 + 38773 RVVDFIDEGV 10 168 574.7589706427858 1147.5033883523715 2 574.7599975466728 MULTI CID FTMS 0 0 0 14528 183491.578125 0.3941794967173585 19 -1.9125213623046875 19 Unmodified _TVDFYFEEV_ ENST00000556798.1_1_12:57627733-57627898:+|nuORF;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENSG00000182199|ENST00000328923|SHMT2;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;nc|ENSG00000182199|P34897-3|SHMT2;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 26.88365393820708 0.1891292719743517 4 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VWD 7 6 45.577 0.0 0.0 3.9719 0.0 0.0 0.0 298.06891809635005 298.06891809635005 12.144104213048614 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.5 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VWD 3.9719 - 1042 + 1 1.221 122482.4 1.0 9672 4873 14528 HBL1_DMSO_200M_050219_2,14547 HBL1_DMSO_200M_050219_2,14547,TVDFYFEEV False False RVVDFIDEGV 76.65311 574.759997546673 690250.5 14528.0 ENST00000556798.1_1_12:57627733-57627898:+|nuORF;;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;;ENSG00000182199|ENST00000328923|SHMT2;;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;;nc|ENSG00000182199|P34897-2|SHMT2;;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;;nc|ENSG00000182199|P34897-3|SHMT2;;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 1.918125828107198 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14548 76.668 800.0 287660.0 25 0 17694.0 + 32061 RVLEKPESLLL 11 186 648.8978150747035 1295.781077216207 2 649.3976928591728 MULTI CID FTMS 0 0 0 14528 168272.3125 0.2536459120376145 -4 0.4403305053710937 20 Unmodified _RVLEKPESLLL_ ENSG00000137221|ENST00000372449|TJAP1;ENST00000454762.1_1_6:43472456-43473590:+|nuORF;nc|ENSG00000137221|Q5JTD0-2|TJAP1;nc|ENSG00000137221|Q5JTD0-4|TJAP1 17.571907917122694 0.6696309617885002 4 [EP]S{I|L}{I|L}[R{I|L}]M{I|L}{I|L} 10 8 41.998 0.0 0.0 3.2411 0.0 0.0 0.0 127.06808927007444 127.06808927007444 10.354869832395089 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.967900182820548 0.25 [EP]S{I|L}{I|L}[R{I|L}]M{I|L}{I|L} 3.2411 - 3636 1 1.221 171587.7 0.9300000071525574 9673 4873 14528 HBL1_DMSO_200M_050219_2,14548 HBL1_DMSO_200M_050219_2,14548,RVLEKPESLLL False True RVLEKPESLLL 76.668118 649.397692859173 30017611.0 14528.0 nc|ENSG00000137221|Q5JTD0-4|TJAP1;;ENSG00000137221|ENST00000372449|TJAP1;;nc|ENSG00000137221|Q5JTD0-2|TJAP1;;ENST00000454762.1_1_6:43472456-43473590:+|nuORF 3.5532615979512534 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14550 76.673 5.2 13510000.0 25 0 2117900.0 40520 VIVIFAAV 8 71 416.2705048077563 830.5264566823126 2 416.2707397341728 MULTI CID FTMS 0 0 0 14549 11955349.0 1.0 0 0.0 1 Unmodified _VIVIFAAV_ ENSG00000136040|ENST00000258526|PLXNC1;ENST00000549810.1_1_12:94645207-94649700:+|nuORF 17.086550045450526 0.6584923310065985 4 [{I|L}V][KP]{I|L}YV 7 5 + 35.322 0.0 0.0 4.2529 4.2529 83.298 0.0 0.0 0.0 15.936135932835144 4.067139329795424 4.067139329795424 35.3216111419632 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V][KP]{I|L}YV 4.2529 - 63 + 1 1.221 62370.2 1.0 9674 4874 14549 HBL1_DMSO_200M_050219_2,14550 HBL1_DMSO_200M_050219_2,14550,VIVIFAAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14551 76.674 7.3 8082500.0 25 0 704460.0 + 43611 YAFPKSITV 9 91 513.2870682780165 1024.5595836228329 2 513.2879516482353 MULTI CID FTMS 0 0 0 14549 6882689.0 0.8200438838022874 -1 0.0802841186523437 2 Unmodified _YAFPKSITV_ ENSG00000155380|ENST00000369626|SLC16A1;nc|ENSG00000155380|P53985-2|SLC16A1 30.63653989081413 0.1413794767160703 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}P 4 5 40.005 0.0 0.0 3.9046 0.0 0.0 0.0 543.3168429010374 543.3168429010374 16.813637641589878 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}P 3.9046 + + 160 + 1 1.221 50305.0 1.0 9675 4874 14549 HBL1_DMSO_200M_050219_2,14551 HBL1_DMSO_200M_050219_2,14551,YAFPKSITV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14552 76.675 27.0 3105800.0 25 0 774630.0 + 32264 RWPDYVREL 9 57 617.3224849501827 1232.6304169671653 2 617.3227416872978 MULTI CID FTMS 0 0 0 14549 2136212.75 0.8347800338235908 -3 0.2955245971679687 3 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 42.312485326615175 0.0627620958981271 4 {I|L}{M(Oxidation (M))|F}RVYDPW 8 8 56.803 0.0 0.0 4.6083 0.0 0.0 0.0 153.07856165103752 153.07856165103752 45.02040447067563 0.0 0.0 0.0 0 1.742992819099939 0.0 0.0 0.4247425010840047 {I|L}{M(Oxidation (M))|F}RVYDPW 4.6083 - 98 + 1 1.221 67746.7 1.0 9676 4874 14549 HBL1_DMSO_200M_050219_2,14552 HBL1_DMSO_200M_050219_2,14552,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14553 76.676 27.0 2434500.0 25 0 240470.0 + 12763 GVPEWFHGA 9 76 500.2378183632048 998.4610837932096 2 500.2379943728447 MULTI CID FTMS 0 0 0 14549 2042922.5 0.9181872238142664 1 -0.101959228515625 4 Unmodified _GVPEWFHGA_ ENSG00000196684|ENST00000613986|HSH2D 32.116972079565 0.1225432171549407 4 [VG]PEW{M(Oxidation (M))|F}HQ 8 2 + 69.66 0.0 0.0 6.9767 6.9767 83.407 0.0 0.0 0.0 33.284634594678266 9.731975075880328 9.731975075880328 4.247425010840047 0 0.3252574989159953 2.0 0.3054621874040891 0.4247425010840047 [VG]PEW{M(Oxidation (M))|F}HQ;[VG]PW{M(Oxidation (M))|F}EHQ;RPEG{M(Oxidation (M))|F}EHQ;[VG]PWE{M(Oxidation (M))|F}HQ;RPEGE{M(Oxidation (M))|F}HQ;[VG]PW{M(Oxidation (M))|F}EHGA;[VG]PEW{M(Oxidation (M))|F}HGA;[VG]PWE{M(Oxidation (M))|F}HGA;RPEG{M(Oxidation (M))|F}EHGA;[VG]PEG{M(Oxidation (M))|F}[WH]A 6.9767;6.5513;6.5501;6.2498;6.2486;5.8363;5.8363;5.5348;5.4097;5.1643 -;-;-;-;-;-;+;-;-;- + 371 + 1 1.221 55077.2 1.0 9677 4874 14549 HBL1_DMSO_200M_050219_2,14553 HBL1_DMSO_200M_050219_2,14553,GVPEWFHGA True True GVPEWFHGA 76.676116 500.237994372845 39790768.0 14549.0 ENSG00000196684|ENST00000613986|HSH2D 9.188819885253906 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14554 76.677 33.0 2039800.0 25 0 174450.0 + 29693 QPFKPLSI 8 89 465.2765020370155 928.5384511408312 2 465.2765991091728 MULTI CID FTMS 0 0 0 14549 1563642.25 1.0 0 0.0 5 Unmodified _QPFKPLSI_ ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1 28.486842064014134 0.4448922141344407 4 K[{I|L}P]S{I|L} 5 3 29.838 0.0 0.0 3.2134 0.0 0.0 372.1768065798565 0.0 372.1768065798565 0.0 18.233754766716626 0.0 0.0 0 0.5 0.0 0.7134679910804405 0.0 + K[{I|L}P]S{I|L} 3.2134 + + 234 + 1 1.221 59715.6 1.0 9678 4874 14549 HBL1_DMSO_200M_050219_2,14554 HBL1_DMSO_200M_050219_2,14554,QPFKPLSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14555 76.678 39.0 1798900.0 25 0 162910.0 + 21719 LPLSSLTHV 9 77 483.7841137772406 965.5536746212812 2 483.7849914431572 MULTI CID FTMS 0 0 0 14549 1334549.5 0.9563900177941428 -2 0.231719970703125 6 Unmodified _LPLSSLTHV_ ENSG00000115942|ENST00000234296|ORC2 48.345845343767074 0.0439967357579942 4 {I|L}P{I|L}SS{I|L}HS{I|L} 9 3 + 99.844 0.0 0.0 10.341 10.341 92.054 0.0 0.0 0.0 36.47817481888637 7.886858533908423 7.886858533908423 7.886858533908423 0 0.8494850021680094 2.0 1.0994850021680094 0.0 {I|L}P{I|L}SS{I|L}HS{I|L};{I|L}P{I|L}SS{I|L}THV;{I|L}P{I|L}SS{I|L}HTV;{I|L}P{I|L}{[WT]|[RM]}HS{I|L};{I|L}P{[WT]|[RM]}{I|L}HS{I|L};{I|L}P{I|L}{[WT]|[RM]}THV;{I|L}P{I|L}{[WT]|[RM]}HTV;{I|L}P{[WT]|[RM]}{I|L}THV;{I|L}P{[WT]|[RM]}{I|L}HTV;[{I|L}P][WE]V[{I|L}P]{I|L} 10.341;9.5238;9.471;8.0395;7.5996;7.2227;7.1698;6.7828;6.7299;3.7203 -;+;-;-;-;-;-;-;-;- + 264 + 1 1.221 57388.4 1.0 9679 4874 14549 HBL1_DMSO_200M_050219_2,14555 HBL1_DMSO_200M_050219_2,14555,LPLSSLTHV True True LPLSSLTHV 76.678472 483.784991443157 47603708.0 14549.0 ENSG00000115942|ENST00000234296|ORC2 7.352297465006511 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14556 76.68 60.0 972290.0 25 0 166650.0 + 2566 ASFNDTFVHV 10 91 568.7721235806049 1135.5296942280097 2 568.7726928591728 MULTI CID FTMS 0 0 0 14549 869125.5625 0.0391000549796016 4 -0.36932373046875 7 Unmodified _ASFNDTFVHV_ ENSG00000164587|ENST00000407193|RPS14;ENST00000519690.1_1_5:149827146-149827347:-|nuORF 58.6788170122104 0.0400518768368984 4 {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}VHV 10 0 + 80.536 0.0 0.0 7.0924 7.0924 93.002 0.0 0.0 0.0 49.62830660950591 8.860566476931638 8.860566476931638 17.659389507179355 0 0.0 1.3979400086720375 0.805462187404089 0.8494850021680094 + + {[SA]|[TG]}{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}VHV;{[SA]|[TG]}{M(Oxidation (M))|F}GGDT{M(Oxidation (M))|F}VHV;{[SA]|[TG]}{M(Oxidation (M))|F}N{[HG]|PP}[HM]HV;{[SA]|[TG]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM}[KS]VHV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKTDN{[WT]|[RM]};{[ES]|[DT]|[{I|L}C]}EKKDN{[WT]|[RM]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TKKDN{[WT]|[RM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[H{I|L}][MT]N{[WT]|[RM]};[WH]NVDMVHV;[WH]VNDMVHV 7.0924;5.5372;3.3456;3.3304;2.6415;2.35;2.2213;2.1062;1.9976;1.8425 +;-;-;-;-;-;-;-;-;- + 514 + 1 1.221 50425.3 1.0 9680 4874 14549 HBL1_DMSO_200M_050219_2,14556 HBL1_DMSO_200M_050219_2,14556,ASFNDTFVHV True True ASFNDTFVHV 76.679978 568.772692859173 527233008.0 14549.0 ENSG00000164587|ENST00000407193|RPS14;;ENST00000519690.1_1_5:149827146-149827347:-|nuORF 9.252544720967611 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14557 76.681 38.0 1083700.0 25 0 54263.0 + + -1 QQADVRLML 9 79 537.2898621748571 0 537.2898437380791 PEAK CID FTMS 0 0 0 14549 735383.8125 0.5960549899984934 -4 0.4183883666992187 8 2 Oxidation (M) _PLM(Oxidation (M))LLQVPM(Oxidation (M))_ nc|ENSG00000140525|Q9NVI1-2|FANCI;ENST00000564350.1_1_15:89826403-89833569:+|nuORF;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI 19.438996006549623 0.2061572778002301 4 WT{I|L} 3 -1 18.188 0.0 0.0 1.6957 0.0 0.0 202.1053458323329 467.2309054010376 669.3362512333705 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 WT{I|L} 1.6957 - 91 + 1 1.221 40571.0 1.0 9681 4874 14549 HBL1_DMSO_200M_050219_2,14557 HBL1_DMSO_200M_050219_2,14557,PLMLLQVPM False False QQADVRLML 76.681157 537.289843738079 20042714.0 14549.0 nc|ENSG00000140525|Q9NVI1-2|FANCI;;ENST00000564350.1_1_15:89826403-89833569:+|nuORF;;nc|ENSG00000140525|Q9NVI1-1|FANCI;;ENSG00000140525|ENST00000310775|FANCI 1.008312563101451 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14558 76.684 136.0 918490.0 25 0 92959.0 24110 LYKLTAHKHK 10 103 619.8692950800139 1237.7240372268277 2 619.8696777224541 MULTI CID FTMS 0 0 0 14549 434879.03125 0.5745597016743248 2 -0.2033309936523437 9 Unmodified _LYKLTAHKHK_ ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM 10.073929032068715 0.6785112666868882 4 [Y{I|L}]KPV 5 7 28.161 0.0 0.0 2.2752 0.0 0.0 0.0 634.3353402876277 634.3353402876277 11.76091259055681 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.0 [Y{I|L}]KPV 2.2752 - 188 1 1.221 99253.4 1.0 9682 4874 14549 HBL1_DMSO_200M_050219_2,14558 HBL1_DMSO_200M_050219_2,14558,LYKLTAHKHK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14559 76.689 258.0 399850.0 25 0 58619.0 -1 LSKLVNSLYP 10 111 588.3352689514177 1174.6559849696353 2 588.3355590701103 MULTI CID FTMS 0 0 0 14549 388004.53125 0.5985276565139256 2 -0.2033309936523437 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LSKLVNSLYP_ ENSG00000149591|ENST00000392951|TAGLN;ENST00000533863.1_2_11:117074025-117074655:+|nuORF 5.731851221503515 0.7001233259664787 4 {I|L} 1 -1 10.969 0.0 0.0 0.93381 0.0 0.0 1043.5609970319383 0.0 1043.5609970319383 0.0 1.7609125905568137 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.93381 + + 65 + 1 1.221 82390.2 1.0 9683 4874 14549 HBL1_DMSO_200M_050219_2,14559 HBL1_DMSO_200M_050219_2,14559,LSKLVNSLYP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14560 76.691 82.0 859720.0 25 0 134720.0 + 37249 TIMPKDIQL 9 104 529.7991452706331 1057.583737608066 2 529.7995483279228 MULTI CID FTMS 0 0 0 14549 340065.46875 0.1040014798243477 -2 0.231719970703125 11 Unmodified _TIMPKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 27.628801355627647 0.1796483985696185 4 [{I|L}T][YV]QPQP{I|L} 9 6 + 54.816 0.0 0.0 5.1831 5.1831 82.266 0.0 0.0 0.0 24.46149961609265 10.51924358097537 10.51924358097537 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [{I|L}T][YV]QPQP{I|L};[{I|L}T][YV][AG]PQP{I|L};[{I|L}T][YV]QP[AG]P{I|L};[{I|L}T]MR[WR]PV;[{I|L}T][YV]QPAAPV;[{I|L}T][WR]RM[VP];{[QN]|[E{I|L}]|[KN]}WKRM[VP];[{I|L}T]AAPQ[YV][VP];[{I|L}T]AAPM[{I|L}T]Q{I|L};[KP]D{I|L}Q[YV][VP] 5.1831;4.3125;4.3125;3.8385;3.5346;3.4623;3.3911;3.1583;2.4388;2.2549 -;-;-;-;-;-;-;-;-;- 407 + 1 1.221 60823.6 1.0 9684 4874 14549 HBL1_DMSO_200M_050219_2,14560 HBL1_DMSO_200M_050219_2,14560,TIMPKDIQL False True TIMPKDIQL 76.69058 529.799548327923 23126416.0 14549.0 ENSG00000278828|ENST00000685041|H3C10;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000197409|ENST00000356476|H3C4;;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000188375|ENST00000340398|H3-5;;ENSG00000277775|ENST00000618052|H3C7;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;;ENSG00000275379|ENST00000616365|H3C11;;ENSG00000163041|ENST00000366815|H3-3A 2.46251118183136 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14561 76.694 147.0 474120.0 25 0 61319.0 + 9616 FLLEKGYEV 9 104 549.2972702966279 1096.5799876600556 2 549.2969848513603 MULTI CID FTMS 0 0 0 14549 258626.578125 0.5172024704079 -1 0.0802841186523437 12 Unmodified _FLLEKGYEV_ ENSG00000112699|ENST00000380815|GMDS;nc|ENSG00000112699|O60547-2|GMDS 29.081581746732265 0.1611639662936252 4 {M(Oxidation (M))|F}{I|L}{I|L}[{M(Oxidation (M))|F}V]KECV 9 5 + 51.398 0.0 0.0 4.6871 4.6871 68.316 0.0 0.0 0.0 0.9678748622465604 1.9957235490520373 0.9678748622465604 0.9678748622465604 0 0.4247425010840047 0.0 1.110924374808178 0.0 {M(Oxidation (M))|F}{I|L}{I|L}[{M(Oxidation (M))|F}V]KECV;{[TV]|[{I|L}S]}G{I|L}[HS]E{I|L}{I|L}E;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DK[{M(Oxidation (M))|F}V]{I|L}{I|L}E;{M(Oxidation (M))|F}{I|L}[{M(Oxidation (M))|F}V]{I|L}KECV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DK{I|L}[{M(Oxidation (M))|F}V]{I|L}E;{M(Oxidation (M))|F}{I|L}{I|L}[{M(Oxidation (M))|F}V]KDC{I|L};{[TV]|[{I|L}S]}[YN][{M(Oxidation (M))|F}V]{I|L}{I|L}E;{[TV]|[{I|L}S]}G[YG][{M(Oxidation (M))|F}V]{I|L}{I|L}E;{[TV]|[{I|L}S]}G{I|L}GY[{M(Oxidation (M))|F}V]{I|L}E;{M(Oxidation (M))|F}{I|L}{I|L}[{M(Oxidation (M))|F}V]EKCV 4.6871;4.5988;4.5051;4.3684;4.1864;4.1607;4.0793;4.0596;4.0056;3.9164 -;-;-;-;-;-;-;-;-;- 683 + 1 1.221 59683.0 1.0 9685 4874 14549 HBL1_DMSO_200M_050219_2,14561 HBL1_DMSO_200M_050219_2,14561,FLLEKGYEV False True FLLEKGYEV 76.693532 549.29698485136 3726826.5 14549.0 ENSG00000112699|ENST00000380815|GMDS;;nc|ENSG00000112699|O60547-2|GMDS 4.580792427062988 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14562 76.702 473.0 479020.0 25 0 49446.0 + 22232 LPRELWHEI 9 159 398.22006025462207 0 398.2206603884697 PEAK CID FTMS 0 0 0 14549 249210.9375 0.3228249538436926 -3 0.2955245971679687 13 Unmodified _LPRELWHEI_ ENSG00000065057|ENST00000651570|NTHL1;ENST00000561841.1_1_16:2089927-2093675:-|nuORF;ENST00000561862.5_1_16:2089927-2090351:-|nuORF;ENST00000562951.5_1_16:2089927-2094062:-|nuORF;ENST00000565406.5_1_16:2089927-2094819:-|nuORF;ENST00000567727.5_1_16:2089927-2093790:-|nuORF;nc|ENSG00000065057|P78549-3|NTHL1;nc|ENSG00000065057|P78549|NTHL1 23.78978130925829 0.1667157386347964 4 EGG 3 8 11.95 0.0 0.0 1.5043 0.0 0.0 113.06533401571672 435.2362312144679 548.3015652301846 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 EGG 1.5043 - 144 + 1 1.221 178178.9 1.0 9686 4874 14549 HBL1_DMSO_200M_050219_2,14562 HBL1_DMSO_200M_050219_2,14562,LPRELWHEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14563 76.704 67.0 742120.0 25 0 58445.0 26984 PEGPRSPSPL 10 91 518.7737514864057 1035.5329500396113 2 519.2759887576103 MULTI CID FTMS 0 0 0 14549 266148.1875 0.0990908312433303 3 -0.3144760131835937 14 Unmodified _PEGPRSPSPL_ ENSG00000115274|ENST00000233331|INO80B 14.838274106304384 0.5985701837916485 4 [TP]DYV[WK]K 8 9 + 16.371 0.0 0.0 1.5809 1.5809 60.518 0.0 0.0 0.0 1.4223342608941252 2.852357284807489 1.4223342608941252 0.5115252244738127 0 0.0 0.8860566476931632 0.0 0.0 [TP]DYV[WK]K;[TP]DYVE[KG]K;[TP]V{[YD]|[{M(Oxidation (M))|F}M]}[WK]Q;[TP]V{[YD]|[{M(Oxidation (M))|F}M]}E[KG]K;{[TV]|[{I|L}S]}P{[YD]|[{M(Oxidation (M))|F}M]}[WK]K;{[TV]|[{I|L}S]}P{[YD]|[{M(Oxidation (M))|F}M]}E[KG]K;[TP]DY[KT][{I|L}A]Q 1.5809;1.5315;0.97296;0.92357;0.75781;0.70841;0.10508 -;-;-;-;-;-;- 206 1 1.221 46968.7 1.0 9687 4874 14549 HBL1_DMSO_200M_050219_2,14563 HBL1_DMSO_200M_050219_2,14563,PEGPRSPSPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14564 76.716 748.0 204130.0 25 0 28525.0 17025 KKIRELEGHIS 11 183 655.3823079751647 1308.7500630171294 2 655.3820068240166 MULTI CID FTMS 0 0 0 14549 197519.890625 0.26289789874226 -5 0.5206146240234375 15 Unmodified _KKIRELEGHIS_ ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11;nc|ENSG00000133392|P35749-3|MYH11;nc|ENSG00000133392|P35749-4|MYH11 5.731851221503515 0.8481046878870278 4 V 1 11 11.99 0.0 0.0 0.91612 0.0 0.0 1191.6705551209363 0.0 1191.6705551209363 0.0 2.59256969938944 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.91612 - 577 + 1 1.221 125087.6 1.0 9688 4874 14549 HBL1_DMSO_200M_050219_2,14564 HBL1_DMSO_200M_050219_2,14564,KKIRELEGHIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14565 76.73 800.0 325890.0 25 0 33178.0 + 39926 VFSASWSAV 9 211 477.2420300034093 952.4695070736186 2 477.2423889040947 MULTI CID FTMS 0 0 0 14549 189402.1875 0.838074828509702 -1 0.0802841186523437 16 Unmodified _VFSASWSAV_ ENSG00000128709|ENST00000249499|HOXD9 30.22481116460888 0.1466181017706357 4 VA{[HG]|PP}C(Carbamidomethyl (C))NA{I|L} 8 7 23.569 0.0 0.0 2.4745 0.0 0.0 112.06687143084362 0.0 112.06687143084362 0.0 9.589738038165905 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 VA{[HG]|PP}C(Carbamidomethyl (C))NA{I|L} 2.4745 - 2361 + 1 1.221 197162.1 0.8500000238418579 9689 4874 14549 HBL1_DMSO_200M_050219_2,14565 HBL1_DMSO_200M_050219_2,14565,VFSASWSAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14566 76.735 270.0 303040.0 25 0 40679.0 + 20028 LINMDKLHL 9 108 366.2101596257008 1095.6086494773024 3 366.2099487185478 MULTI CID FTMS 0 0 0 14549 184041.1875 0.8645473896930347 -1 0.0802841186523437 17 Unmodified _LINMDKLHL_ REV__ENST00000378045.4_1_X:44383421-44383484:-|nuORF 10.073929032068715 0.563993802247229 4 {I|L}PND{M(Oxidation (M))|F}K{I|L}H{I|L} 9 -1 + 48.801 0.0 0.0 4.4543 4.4543 72.271 0.0 0.0 0.0 16.478174818886373 3.4845464559211905 3.4845464559211905 3.4845464559211905 0 0.0 0.0 0.0 0.0 {I|L}PND{M(Oxidation (M))|F}K{I|L}H{I|L};{I|L}PND{M(Oxidation (M))|F}K{I|L}{I|L}H;{I|L}PGGD{M(Oxidation (M))|F}K{I|L}H{I|L};{I|L}PND{M(Oxidation (M))|F}[H{I|L}]K{I|L};{I|L}PGGD{M(Oxidation (M))|F}K{I|L}{I|L}H;{I|L}YY{M(Oxidation (M))|F}K{I|L}H{I|L};{I|L}PGGD{M(Oxidation (M))|F}[H{I|L}]K{I|L};{I|L}YY{M(Oxidation (M))|F}K{I|L}{I|L}H;{I|L}YY{M(Oxidation (M))|F}[H{I|L}]K{I|L} 4.4543;4.1362;3.6138;3.3301;3.2957;2.7011;2.4897;2.383;1.5769 -;-;-;-;-;-;-;-;- 157 + 1 1.221 73337.8 1.0 9690 4874 14549 HBL1_DMSO_200M_050219_2,14566 HBL1_DMSO_200M_050219_2,14566,LINMDKLHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14567 76.749 800.0 185350.0 25 0 9310.3 27138 PFPHVVRAGAI 11 185 582.3352849449232 1162.6560169566462 2 582.3354369997978 MULTI CID FTMS 0 0 0 14549 158560.4375 0.2666561908766029 -3 0.2955245971679687 18 Unmodified _PFPHVVRAGAI_ ENSG00000167173|ENST00000394987|C15orf39;nc|nan|Q6ZRI6-2|C15orf39 6.2057823575117 0.8458686499021061 4 [EP]D 3 10 14.27 0.0 0.0 1.2273 0.0 0.0 0.0 818.510178904165 818.510178904165 1.0215045050067388 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 [EP]D 1.2273 - 1227 1 1.221 112171.4 0.9300000071525574 9691 4874 14549 HBL1_DMSO_200M_050219_2,14567 HBL1_DMSO_200M_050219_2,14567,PFPHVVRAGAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14568 76.756 311.0 294030.0 25 0 18731.0 -1 0 101 644.656949076963 1930.949017831089 3 644.9913207888603 MULTI CID FTMS 0 0 0 14549 152060.90625 0.3181963323335917 -5 0.5206146240234375 19 4 {[DA]|[EG]}VV 4 -1 32.167 0.0 0.0 1.6659 0.0 0.0 0.0 1543.7286253352484 1543.7286253352484 11.303337684950066 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}VV 1.6659 - 182 1 1.221 76855.7 1.0 9692 4874 14549 HBL1_DMSO_200M_050219_2,14568 HBL1_DMSO_200M_050219_2,14568, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14569 76.77 800.0 124510.0 25 0 7234.4 + 4433 DAWDLRGAGVV 11 177 579.7995097351596 1157.5844665371192 2 579.7997924685478 MULTI CID FTMS 0 0 0 14549 152727.921875 1.0 0 0.0 20 Unmodified _DAWDLRGAGVV_ ENSG00000214279|ENST00000640237|SCART1;ENST00000463137.5_1_10:135271820-135273512:+|nuORF;ENST00000482993.6_3_10:135272457-135273512:+|nuORF;ENST00000488261.6_3_10:135271820-135304727:+|nuORF;nc|ENSG00000214279|Q4G0T1-3|SCART1 26.020703789607367 0.4812285719068541 4 {[DA]|[EG]}WD{I|L}[KS]QPV 10 5 + 28.437 0.0 0.0 2.4566 2.4566 62.332 0.0 0.0 0.0 2.1951925305617976 2.031375532637689 2.031375532637689 1.1159775247824086 0 0.6462566630072955 1.2218487496163564 0.0 0.2887254899964357 {[DA]|[EG]}WD{I|L}[KS]QPV;{[DA]|[EG]}W[RN]{I|L}WVV;{[DA]|[EG]}[Y{I|L}][RH]WVV;{[DA]|[EG]}WD{I|L}[KS][AG]PV;{[DA]|[EG]}WD{I|L}[KS][NP]{I|L};{[DA]|[EG]}[Y{I|L}][RH]VWV;{[DA]|[EG]}W[RN]{I|L}[RD]{I|L};{[QN]|[E{I|L}]|[KN]}YG[RH]WVV;[{I|L}T]Q[PG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WVV;W{[DA]|[EG]}D{I|L}[KS]QPV 2.4566;2.3602;1.8773;1.6649;1.6012;1.4651;1.4617;1.455;1.4352;1.4011 -;-;-;-;-;-;-;-;-;- 1037 + 1 1.221 84335.9 0.9100000262260436 9693 4874 14549 HBL1_DMSO_200M_050219_2,14569 HBL1_DMSO_200M_050219_2,14569,DAWDLRGAGVV False True DAWDLRGAGVV 76.770099 579.799792468548 955144.6875 14549.0 ENST00000463137.5_1_10:135271820-135273512:+|nuORF;;ENST00000488261.6_3_10:135271820-135304727:+|nuORF;;nc|ENSG00000214279|Q4G0T1-3|SCART1;;ENSG00000214279|ENST00000640237|SCART1;;ENST00000482993.6_3_10:135272457-135273512:+|nuORF 3.86972983678182 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14571 76.775 10.0 5796500.0 25 0 893950.0 + 36579 TALLKIEGV 9 76 472.2949192706823 942.5752856081646 2 472.2950927615166 MULTI CID FTMS 0 0 0 14570 5727471.0 0.8715764581099059 1 -0.1013717651367187 1 Unmodified _TALLKIEGV_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000329092.12_1_3:197677808-197679492:+|nuORF;ENST00000478069.1_1_4:95290987-95291311:+|nuORF;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 71.92227651296345 0.0203558744033348 4 [TA]{I|L}{I|L}K{I|L}EGV 9 0 + 71.667 0.0 0.0 7.6033 7.6033 95.887 0.0 0.0 0.0 40.909649509113066 8.952424927286842 8.952424927286842 37.97782449510585 0 1.1989700043360187 2.0 1.0114393726401687 0.0 + + [TA]{I|L}{I|L}K{I|L}EGV;{I|L}{I|L}K[R{M(Oxidation (M))|F}]{I|L}[PG];[K{I|L}][R{M(Oxidation (M))|F}]{I|L}{I|L}[PG];{I|L}{I|L}K{I|L}[R{M(Oxidation (M))|F}][PG];[K{I|L}]{I|L}[R{M(Oxidation (M))|F}]{I|L}[PG];[K{I|L}]{I|L}{I|L}[R{M(Oxidation (M))|F}][PG] 7.6033;3.5741;3.3584;3.1235;2.9876;2.537 +;-;-;-;-;- + 326 + 1 1.225 52419.8 1.0 9694 4875 14570 HBL1_DMSO_200M_050219_2,14571 HBL1_DMSO_200M_050219_2,14571,TALLKIEGV True True TALLKIEGV 76.774544 472.295092761517 155880012.0 14570.0 ENSG00000182899|ENST00000647248|RPL35A;;ENST00000485439.5_1_3:197677808-197681048:+|nuORF;;ENST00000478069.1_1_4:95290987-95291311:+|nuORF;;ENST00000329092.12_1_3:197677808-197679492:+|nuORF 5.452873229980469 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14572 76.776 17.0 3192800.0 25 0 262420.0 28876 QALPAAHEAV 10 87 503.77043923436906 1005.526325535538 2 503.7706176638603 MULTI CID FTMS 0 0 0 14570 3161327.0 0.9846188298138902 1 -0.1013717651367187 2 Unmodified _QALPAAHEAV_ ENSG00000135931|ENST00000611582|ARMC9 20.453626601364224 0.5043500229302764 4 [QA]{I|L} 3 7 23.697 0.0 0.0 2.3566 0.0 0.0 0.0 690.3233280592287 690.3233280592287 3.519374645445623 0.0 0.0 0.0 0 0.4247425010840047 0.8239087409443188 0.0 0.4247425010840047 + [QA]{I|L} 2.3566 + + 104 1 1.225 45779.3 1.0 9695 4875 14570 HBL1_DMSO_200M_050219_2,14572 HBL1_DMSO_200M_050219_2,14572,QALPAAHEAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14573 76.777 8.8 6991500.0 25 0 948080.0 15527 IPVLANFIV 9 87 493.30756668585485 984.6005804385096 2 493.3076660037041 MULTI CID FTMS 0 0 0 14570 5021912.0 0.8402744476127723 11 -1.0634613037109375 3 Unmodified _IPVLANFIV_ ENSG00000146085|ENST00000274813|MMUT 21.74664581756881 0.2544899275067181 4 {I|L}P 2 7 45.217 0.0 0.0 4.5924 0.0 0.0 0.0 771.4423556701381 771.4423556701381 11.8786250045057 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.5924 + + 302 + 1 1.225 51436.5 1.0 9696 4875 14570 HBL1_DMSO_200M_050219_2,14573 HBL1_DMSO_200M_050219_2,14573,IPVLANFIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14574 76.778 59.0 1489100.0 25 0 126640.0 + 32273 RWPDYVREL 9 90 411.88402130637087 1232.6302345193126 3 411.8840515017509 MULTI CID FTMS 0 0 0 14570 895016.3125 0.7756291472654588 1 -0.1013717651367187 4 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 49.55428908609986 0.0413471690215031 4 [WR]PDY 5 4 43.741 0.0 0.0 3.5486 0.0 0.0 0.0 512.285140437778 512.285140437778 26.20506544868192 0.0 0.0 0.0 0 1.3182503180159344 1.5228787452803376 0.3494850021680094 0.6861818737241735 + [WR]PDY 3.5486 + + 177 1 1.225 73167.2 1.0 9697 4875 14570 HBL1_DMSO_200M_050219_2,14574 HBL1_DMSO_200M_050219_2,14574,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14575 76.78 65.0 1088300.0 25 0 720880.0 -1 0 53 440.24065292539154 439.2333764587916 1 440.2412292361259 MULTI CID FTMS 0 0 0 14570 864888.125 0.8841379070643195 3 -0.267364501953125 5 4 V 1 -1 12.218 0.0 0.0 2.7818 0.0 0.0 322.1539982623056 0.0 322.1539982623056 0.0 11.505149978319904 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.7818 - 5 + 1 1.225 60293.8 1.0 9698 4875 14570 HBL1_DMSO_200M_050219_2,14575 HBL1_DMSO_200M_050219_2,14575, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14576 76.782 81.0 694460.0 25 0 93348.0 + 31174 RLPESFSAL 9 84 510.28087386629335 1018.5471947993868 2 510.2798950076103 MULTI CID FTMS 0 0 0 14570 500266.96875 0.7828063359392742 5 -0.4799728393554687 6 Unmodified _RLPESFSAL_ ENST00000561282.5_1_15:40384025-40396514:-|nuORF 36.506200033944 0.094635877243972 4 [R{I|L}][EP]S{M(Oxidation (M))|F}SA{I|L} 9 0 + 58.606 0.0 0.0 5.7539 5.7539 83.497 0.0 0.0 0.0 3.925449767853309 44.6265249738142 3.925449767853309 9.030899869919438 0 1.3494850021680094 0.0 0.9247425010840048 0.0 + + [R{I|L}][EP]S{M(Oxidation (M))|F}SA{I|L};{[QN]|[E{I|L}]|[KN]}[RP]S{M(Oxidation (M))|F}SA{I|L};{[SA]|[TG]}[H{I|L}]R[WH]{I|L} 5.7539;4.8672;2.27 +;-;- + 162 1 1.225 51263.9 1.0 9699 4875 14570 HBL1_DMSO_200M_050219_2,14576 HBL1_DMSO_200M_050219_2,14576,RLPESFSAL True True RLPESFSAL 76.781765 510.27989500761 5603362.5 14570.0 ENST00000561282.5_1_15:40384025-40396514:-|nuORF 5.917216777801514 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14577 76.784 117.0 634540.0 25 0 124950.0 + 12411 GTINNLIHV 9 112 490.78008084055926 979.5456087479184 2 490.7802612185478 MULTI CID FTMS 0 0 0 14570 452854.71875 0.7266141313623953 -1 0.101959228515625 7 Unmodified _GTINNLIHV_ ENSG00000131791|ENST00000254101|PRKAB2;nc|ENSG00000131791|O43741-2|PRKAB2 36.04419817259434 0.0971720506436186 4 {[SA]|[TG]}{I|L}NN{I|L}{I|L}HV 9 0 + 62.846 0.0 0.0 6.4158 6.4158 87.267 0.0 0.0 0.0 49.35132218389654 8.24577916330449 8.24577916330449 9.208187539523747 0 0.3807196863200844 1.6989700043360187 0.0 0.4247425010840047 + + {[SA]|[TG]}{I|L}NN{I|L}{I|L}HV;{[SA]|[TG]}{I|L}NGG{I|L}{I|L}HV;{[SA]|[TG]}{I|L}GGN{I|L}{I|L}HV;{[SA]|[TG]}{I|L}NN{I|L}[HV]{I|L};{[SA]|[TG]}{I|L}NGG{I|L}[HV]{I|L};{[SA]|[TG]}{I|L}GGN{I|L}[HV]{I|L};{[SA]|[TG]}{I|L}GGGG{I|L}{I|L}HV 6.4158;5.4758;5.4758;5.4236;4.4835;4.4835;4.1066 +;-;-;-;-;-;- + 495 + 1 1.225 61431.9 1.0 9700 4875 14570 HBL1_DMSO_200M_050219_2,14577 HBL1_DMSO_200M_050219_2,14577,GTINNLIHV True True GTINNLIHV 76.784198 490.780261218548 4536696.5 14570.0 nc|ENSG00000131791|O43741-2|PRKAB2;;ENSG00000131791|ENST00000254101|PRKAB2 6.519274552663167 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14578 76.786 66.0 795240.0 25 0 105430.0 + 43669 YARQLEMIV 9 91 561.8035259920644 1121.5924990509286 2 561.8026611208916 MULTI CID FTMS 0 0 0 14570 411743.59375 0.1846418190069456 -2 0.1822433471679687 8 Unmodified _YARQLEMIV_ ENSG00000099341|ENST00000215071|PSMD8 27.628801355627647 0.1796483985696185 4 {I|L}C(Carbamidomethyl (C))Q{I|L}EM{I|L}V 8 3 34.149 0.0 0.0 3.0447 0.0 0.0 117.0796604840836 0.0 117.0796604840836 0.0 13.435720076819493 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}C(Carbamidomethyl (C))Q{I|L}EM{I|L}V 3.0447 - 503 1 1.225 47057.0 1.0 9701 4875 14570 HBL1_DMSO_200M_050219_2,14578 HBL1_DMSO_200M_050219_2,14578,YARQLEMIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14579 76.788 126.0 905470.0 25 0 136630.0 + 21754 LPMHPLQI 8 118 474.7704197525736 947.5262865719473 2 474.7705566287041 MULTI CID FTMS 0 0 0 14570 412476.5 0.3475889069844386 -2 0.1822433471679687 9 Unmodified _LPMHPLQI_ ENSG00000134744|ENST00000257177|TUT4;ENST00000466440.1_1_1:52890958-52897138:-|nuORF;nc|ENSG00000134744|Q5TAX3|TUT4 90.83580072412532 0.0563165270037559 4 {I|L}MPHP{I|L}Q{I|L} 8 2 + 52.405 0.0 0.0 5.5308 5.5308 81.791 0.0 0.0 0.0 29.7539539840691 12.18765315847925 12.18765315847925 7.971062485323515 0 1.3979400086720375 0.0 0.0 1.305462187404089 {I|L}MPHP{I|L}Q{I|L};{I|L}MPHPQ{I|L}{I|L};M{I|L}PHP{I|L}Q{I|L};[{I|L}P]MHPQ{I|L}{I|L};M{I|L}PHPQ{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{I|L}PQ{I|L}{I|L};[{I|L}P]MHP{I|L}Q{I|L};[{I|L}P]MHQP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{I|L}P{I|L}Q{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{I|L}QP{I|L}{I|L} 5.5308;4.6895;4.6854;3.9792;3.8441;3.7797;3.4818;3.4757;3.2822;3.2761 -;-;-;-;-;-;+;-;-;- + 1220 + 1 1.225 92635.0 1.0 9702 4875 14570 HBL1_DMSO_200M_050219_2,14579 HBL1_DMSO_200M_050219_2,14579,LPMHPLQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14580 76.791 150.0 856150.0 25 0 80866.0 + 41390 VPKWLLSDLIL 11 120 432.9338699350302 1295.7797804052907 3 432.9342529177666 MULTI CID FTMS 0 0 0 14570 366788.375 0.6287927595681841 -2 0.1822433471679687 10 Unmodified _VPKWLLSDLIL_ REV__ENST00000564961.1_1_16:27214833-27222512:+|nuORF 20.871137199558856 0.6010033448902867 4 [EP]S{I|L}K[R{I|L}]D{I|L}{I|L}{I|L} 11 -1 + 35.198 0.0 0.0 2.7164 2.7164 75.812 0.0 0.0 0.0 8.761296490696076 6.513740415385783 6.513740415385783 10.329252217378578 0 0.2614393726401688 1.3010299956639813 1.579689690656103 0.0 [EP]S{I|L}K[R{I|L}]D{I|L}{I|L}{I|L};[VP][KT]{I|L}S{I|L}SEP{I|L}{I|L};[VP][KT]{I|L}S[EP]S{I|L}{I|L}{I|L};{I|L}{I|L}[RD]K{I|L}SEP{I|L}{I|L};[{I|L}P]KS{I|L}S{I|L}SEP{I|L}{I|L};{I|L}{I|L}[RD]K[EP]S{I|L}{I|L}{I|L};[{I|L}P]KS{I|L}S[EP]S{I|L}{I|L}{I|L};[VP][KT]{I|L}P{[ES]|[DT]|[{I|L}C]}S{I|L}{I|L}{I|L};[RV]{I|L}EK{I|L}SEP{I|L}{I|L};[{I|L}P]KS{I|L}P{[ES]|[DT]|[{I|L}C]}S{I|L}{I|L}{I|L} 2.7164;1.9192;1.8642;1.856;1.841;1.801;1.786;1.7678;1.7365;1.6895 -;-;-;-;-;-;-;-;-;- 1031 1 1.225 113979.6 1.0 9703 4875 14570 HBL1_DMSO_200M_050219_2,14580 HBL1_DMSO_200M_050219_2,14580,VPKWLLSDLIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14581 76.796 245.0 548990.0 25 0 56148.0 + 45716 YYFDRDDVAL 10 133 638.7953002051315 1275.576047477063 2 638.7967407107353 MULTI CID FTMS 0 0 0 14570 312277.78125 0.3637594779452942 -2 0.1822433471679687 11 Unmodified _YYFDRDDVAL_ ENSG00000167996|ENST00000273550|FTH1;ENST00000533138.1_1_11:61732822-61734897:-|nuORF;ENST00000534719.1_1_11:61732389-61734897:-|nuORF 40.72490554402381 0.149912226101682 4 YY{M(Oxidation (M))|F}D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]A{I|L} 10 4 + 58.325 0.0 0.0 4.5724 4.5724 76.514 0.0 0.0 0.0 15.36591559107302 7.234868096692729 7.234868096692729 6.532125137753425 0 1.424742501084005 2.0 0.2887254899964357 0.0 YY{M(Oxidation (M))|F}D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]A{I|L};YYVY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]A{I|L};YY{M(Oxidation (M))|F}D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{I|L}A;[VP]AAD{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YYA{I|L};YYVY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{I|L}A;[VP]ADA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YYA{I|L};[PA]VAD{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YYA{I|L};{[VA]|[{I|L}G]}PAD{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YYA{I|L};[VP]AAD{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AYY{I|L};[{I|L}T]{[NV]|[RG]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))YYA{I|L} 4.5724;4.0603;3.3489;3.0947;2.8368;2.7827;2.5741;2.5724;2.5647;2.5225 -;-;-;-;-;-;-;-;-;- 2403 + 1 1.225 103993.5 1.0 9704 4875 14570 HBL1_DMSO_200M_050219_2,14581 HBL1_DMSO_200M_050219_2,14581,YYFDRDDVAL False True YYFDRDDVAL 76.795942 638.796740710735 13538123.0 14570.0 ENST00000534719.1_1_11:61732389-61734897:-|nuORF;;ENSG00000167996|ENST00000273550|FTH1;;ENST00000533138.1_1_11:61732822-61734897:-|nuORF 7.099923928578694 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14582 76.8 242.0 625230.0 25 0 132000.0 + 260 ADAPVALVV 9 118 427.75259281544993 853.4906326976999 2 427.7531310915947 MULTI CID FTMS 0 0 0 14570 306285.0 0.0567829256522523 -2 0.1822433471679687 12 Unmodified _ADAPVALVV_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 50.855029805455786 0.0384952370514206 4 [VP]AADA{I|L}VV 9 4 + 59.249 0.0 0.0 6.942 6.942 81.203 0.0 0.0 0.0 13.979400086720377 10.330145895351848 10.330145895351848 3.0102999566398125 0 0.7429928190999391 1.2218487496163564 0.6747425010840047 0.0 [VP]AADA{I|L}VV;[VP]AAD{I|L}AVV;[VP]ADAA{I|L}VV;[VP]A{I|L}ADAVV;[VP]ADA{I|L}AVV;[VP]AA{I|L}DAVV;[VP]A{I|L}DAAVV;[{I|L}P]GADA{I|L}VV;{[DA]|[EG]}PVAA{I|L}VV;[VP]{I|L}AADAVV 6.942;6.5893;6.3674;6.1798;6.0147;5.8271;5.5931;5.3041;5.2886;5.0081 -;-;-;-;-;-;-;-;-;- 934 1 1.225 119638.4 1.0 9705 4875 14570 HBL1_DMSO_200M_050219_2,14582 HBL1_DMSO_200M_050219_2,14582,ADAPVALVV True True ADAPVALVV 76.800457 427.753131091595 58234756.0 14570.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 1.932615339756012 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14583 76.811 615.0 295900.0 25 0 37166.0 + 33205 KIAQDLEMYGV 11 165 633.3691586956885 1264.723764458177 2 633.3694335818291 MULTI CID FTMS 0 0 0 14570 295283.96875 0.1467694035783756 -12 1.1771621704101562 13 Unmodified _SFIRTLIITCV_ nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000186575|P35240-6|NF2;nc|ENSG00000186575|P35240-5|NF2;ENST00000511640.1_1_5:25909808-25910855:+|nuORF;nc|ENSG00000186575|P35240-3|NF2;nc|ENSG00000137710|P35241-5|RDX;nc|ENSG00000186575|P35240-8|NF2;ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000186575|P35240-4|NF2;nc|ENSG00000186575|P35240-7|NF2;ENSG00000147065|ENST00000360270|MSN;ENSG00000186575|ENST00000338641|NF2;nc|ENSG00000186575|P35240-2|NF2 5.731851221503515 0.8481046878870278 4 V 1 10 12.218 0.0 0.0 0.9661 0.0 0.0 1147.6443557441128 0.0 1147.6443557441128 0.0 0.3561282682182476 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.9661 + + 795 + 1 1.225 139258.6 1.0 9706 4875 14570 HBL1_DMSO_200M_050219_2,14583 HBL1_DMSO_200M_050219_2,14583,SFIRTLIITCV False False KIAQDLEMYGV 76.811209 633.369433581829 575520.75 14570.0 nc|ENSG00000137710|P35241-4|RDX;;nc|ENSG00000186575|P35240-6|NF2;;nc|ENSG00000186575|P35240-5|NF2;;ENST00000511640.1_1_5:25909808-25910855:+|nuORF;;nc|ENSG00000186575|P35240-3|NF2;;nc|ENSG00000137710|P35241-5|RDX;;nc|ENSG00000186575|P35240-8|NF2;;ENSG00000137710|ENST00000645495|RDX;;nc|ENSG00000186575|P35240-4|NF2;;nc|ENSG00000186575|P35240-7|NF2;;ENSG00000147065|ENST00000360270|MSN;;ENSG00000186575|ENST00000338641|NF2;;nc|ENSG00000186575|P35240-2|NF2 4.995207230250041 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14584 76.815 192.0 539770.0 25 0 54834.0 903 AEYIAQVKGI 10 121 546.3085348680125 0 546.3088867068291 PEAK CID FTMS 0 0 0 14570 217179.265625 0.1676959769488676 -2 0.1822433471679687 14 Unmodified _AEYIAQVKGI_ ENSG00000203705|ENST00000366974|TATDN3;nc|ENSG00000203705|Q17R31-2|TATDN3;nc|ENSG00000203705|Q17R31-3|TATDN3;nc|ENSG00000203705|Q17R31-4|TATDN3 37.97399986684836 0.1321455838593572 4 Y{I|L}VV 4 7 30.745 0.0 0.0 2.8191 0.0 0.0 200.0809971055681 413.2157686822876 613.2967657878556 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 Y{I|L}VV 2.8191 - 220 + 1 1.225 85712.9 1.0 9707 4875 14570 HBL1_DMSO_200M_050219_2,14584 HBL1_DMSO_200M_050219_2,14584,AEYIAQVKGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14585 76.819 193.0 367430.0 25 0 53473.0 + 16206 IVISKLTQI 9 109 507.8319441002468 1013.6493352672936 2 507.8322936892509 MULTI CID FTMS 0 0 0 14570 204596.640625 0.5900493950975131 -1 0.101959228515625 15 Unmodified _IVISKLTQI_ ENSG00000113141|ENST00000417647|IK 26.268140514670165 0.1969607489560049 4 {I|L}V{I|L}S 4 5 53.276 0.0 0.0 5.2559 0.0 0.0 0.0 598.3595675104124 598.3595675104124 17.27986387747039 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + {I|L}V{I|L}S 5.2559 + + 693 + 1 1.225 59957.0 1.0 9708 4875 14570 HBL1_DMSO_200M_050219_2,14585 HBL1_DMSO_200M_050219_2,14585,IVISKLTQI False True IVISKLTQI 76.818602 507.832293689251 2222318.5 14570.0 ENSG00000113141|ENST00000417647|IK 3.032206416130066 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14586 76.831 737.0 465710.0 25 0 20199.0 + 22231 LPRELWHEI 9 220 596.8267004738639 1191.6388480145276 2 596.8266479372978 MULTI CID FTMS 0 0 0 14570 193087.53125 0.5904593451490803 -2 0.1822433471679687 16 Unmodified _LPRELWHEI_ ENSG00000065057|ENST00000651570|NTHL1;ENST00000561841.1_1_16:2089927-2093675:-|nuORF;ENST00000561862.5_1_16:2089927-2090351:-|nuORF;ENST00000562951.5_1_16:2089927-2094062:-|nuORF;ENST00000565406.5_1_16:2089927-2094819:-|nuORF;ENST00000567727.5_1_16:2089927-2093790:-|nuORF;nc|ENSG00000065057|P78549-3|NTHL1;nc|ENSG00000065057|P78549|NTHL1 27.22323531849824 0.1848086127304535 4 [VP]A{I|L}VEWHE{I|L} 10 5 + 57.054 0.0 0.0 4.7879 4.7879 70.492 0.0 0.0 0.0 4.607308385314937 15.651668842475033 4.607308385314937 1.8752072083646425 0 1.0501648626366045 0.3467874862246563 0.0 0.0 [VP]A{I|L}VEWHE{I|L};[VP]A{I|L}VEVSHE{I|L};[{I|L}P]G{I|L}VEWHE{I|L};[{I|L}P]G{I|L}VEVSHE{I|L};[VP]A{I|L}D{I|L}WHE{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}WHE{I|L};[VP]A{I|L}D{I|L}VSHE{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}VSHE{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}GEHE{I|L};[{I|L}P]G{I|L}D{I|L}WHE{I|L} 4.7879;4.6305;4.4012;4.2439;4.2397;4.1753;4.0823;4.0142;3.9656;3.8531 -;-;-;-;-;-;-;-;-;- 7124 1 1.225 247268.4 1.0 9709 4875 14570 HBL1_DMSO_200M_050219_2,14586 HBL1_DMSO_200M_050219_2,14586,LPRELWHEI False True LPRELWHEI 76.83138 596.826647937298 2977328.25 14570.0 ENST00000561841.1_1_16:2089927-2093675:-|nuORF;;ENSG00000065057|ENST00000651570|NTHL1;;ENST00000561862.5_1_16:2089927-2090351:-|nuORF;;nc|ENSG00000065057|P78549-3|NTHL1;;ENST00000565406.5_1_16:2089927-2094819:-|nuORF;;ENST00000562951.5_1_16:2089927-2094062:-|nuORF;;ENST00000567727.5_1_16:2089927-2093790:-|nuORF;;nc|ENSG00000065057|P78549|NTHL1 5.977601369222005 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14587 76.846 762.0 245870.0 25 0 13614.0 -1 0 153 764.3618631353045 2290.063760006113 3 764.3640624880791 MULTI CID FTMS 0 0 0 14570 204840.484375 1.0 0 0.0 17 4 [MN]PN{I|L}NW{[{M(Oxidation (M))|F}H]|[RQ]}D{I|L}RQ{[DA]|[EG]}N{I|L} 17 -1 100.25 0.0 0.0 4.3775 0.0 0.0 0.0 208.0731600397094 208.0731600397094 52.8188481369545 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.6861818737241735 1.5669015600442575 [MN]PN{I|L}NW{[{M(Oxidation (M))|F}H]|[RQ]}D{I|L}RQ{[DA]|[EG]}N{I|L} 4.3775 - 4684 + 1 1.225 133409.3 1.0 9710 4875 14570 HBL1_DMSO_200M_050219_2,14587 HBL1_DMSO_200M_050219_2,14587, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14588 76.849 189.0 470550.0 25 0 35011.0 + 10088 FPSEYVPTV 9 142 519.7601260587339 0 519.7589599490166 PEAK CID FTMS 0 0 0 14570 196494.015625 0.7847819676872908 -2 0.1822433471679687 18 Unmodified _FPSEYVPTV_ ENSG00000070831|ENST00000656825|CDC42;nc|ENSG00000289694|P60953-1|CDC42 28.486842064014134 0.1241350795510704 4 V{M(Oxidation (M))|F}YDD 5 8 19.237 0.0 0.0 1.8541 0.0 0.0 315.17646673299697 80.05126367740468 395.2277304104017 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 1.087180496500464 0.0 V{M(Oxidation (M))|F}YDD 1.8541 - 374 + 1 1.225 77501.3 1.0 9711 4875 14570 HBL1_DMSO_200M_050219_2,14588 HBL1_DMSO_200M_050219_2,14588,FPSEYVPTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14589 76.858 470.0 264770.0 25 0 22769.0 10049 FPPSLSLSL 9 145 480.7719059070592 0 480.7718383669853 PEAK CID FTMS 0 0 0 14570 153156.640625 1.0 0 0.0 19 Unmodified _FPPSLSLSL_ ENST00000542104.5_2_12:65089764-65089941:+|nuORF 32.116972079565 0.1004713836468113 4 {I|L}TN 3 8 18.148 0.0 0.0 1.8914 0.0 0.0 335.20505341392465 293.12656580142817 628.3316192153528 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.4247425010840047 {I|L}TN 1.8914 - 381 + 1 1.225 95968.7 1.0 9712 4875 14570 HBL1_DMSO_200M_050219_2,14589 HBL1_DMSO_200M_050219_2,14589,FPPSLSLSL True True NQVSTIVSL 76.857713 480.771838366985 1276412.125 14570.0 ENSG00000092148|ENST00000399332|HECTD1 1.1015153924624126 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14590 76.872 800.0 310710.0 25 0 25367.0 + -1 TAAIAPII 8 149 769.0333953233165 2304.078356570149 3 769.0360595583916 MULTI CID FTMS 0 0 0 14570 136092.65625 0.8264230150886509 -1 0.101959228515625 20 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-4|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;ENSG00000006744|ENST00000338034|ELAC2 4 [MN]PN{I|L}[HD]Q{I|L}{[WT]|[RM]}WM{I|L}PT 16 -1 62.332 0.0 0.0 2.7053 0.0 0.0 0.0 323.1727694147094 323.1727694147094 46.02064214625614 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.7302046884880937 0.3807196863200844 [MN]PN{I|L}[HD]Q{I|L}{[WT]|[RM]}WM{I|L}PT 2.7053 - 6763 + 1 1.225 174277.9 0.949999988079071 9713 4875 14570 HBL1_DMSO_200M_050219_2,14590 HBL1_DMSO_200M_050219_2,14590, False False TAAIAPII 76.871546 769.036059558392 2823873.75 14570.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2 3.4735514322916665 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14592 76.876 16.0 3458100.0 25 0 587240.0 + 4077 DAMRLYYV 8 78 515.7543466344052 1029.4941403356104 2 515.7551757693291 MULTI CID FTMS 0 0 0 14591 2531347.75 0.6687908846628955 1 -0.11114501953125 1 Unmodified _DAMRLYYV_ ENSG00000105258|ENST00000221859|POLR2I;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;ENST00000589591.5_1_19:36604659-36605638:-|nuORF;ENST00000592962.5_1_19:36604659-36605276:-|nuORF 29.84058131909904 0.4163871034372953 4 {[DA]|[EG]}{[WT]|[RM]}{I|L}YYV 8 0 + 51.094 0.0 0.0 4.963 4.963 84.779 0.0 0.0 0.0 17.165762445130497 35.60911268361153 17.165762445130497 19.033350405587434 0 0.9247425010840048 1.3979400086720375 0.0 0.3252574989159953 + + {[DA]|[EG]}{[WT]|[RM]}{I|L}YYV;{[DA]|[EG]}{[WT]|[RM]}{I|L}[DP]NV 4.963;3.1142 +;- + 73 1 1.225 46135.2 1.0 9714 4876 14591 HBL1_DMSO_200M_050219_2,14592 HBL1_DMSO_200M_050219_2,14592,DAMRLYYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14593 76.877 27.0 1722500.0 25 0 216500.0 2755 ATLKELTSL 9 85 488.2896683102353 974.5647836872706 2 488.2899352908134 MULTI CID FTMS 0 0 0 14591 1752011.5 0.6260471234940418 1 -0.11114501953125 2 Unmodified _ATLKELTSL_ ENSG00000150459|ENST00000382533|SAP18;ENST00000434334.1_1_2:182559249-182559624:+|nuORF;nc|ENSG00000150459|O00422|SAP18 32.78568957990786 0.1150597335874693 4 [TA]{M(Oxidation (M))|F}{I|L}AT{I|L}GD 9 6 51.717 0.0 0.0 5.3067 0.0 0.0 0.0 82.06698023013905 82.06698023013905 30.748031033778744 0.0 0.0 0.0 0 0.3807196863200844 1.3010299956639813 0.3807196863200844 0.0 [TA]{M(Oxidation (M))|F}{I|L}AT{I|L}GD 5.3067 - 337 + 1 1.225 42263.7 1.0 9715 4876 14591 HBL1_DMSO_200M_050219_2,14593 HBL1_DMSO_200M_050219_2,14593,ATLKELTSL True True KIETALTSL 76.877092 488.289935290813 46026468.0 14591.0 ENSG00000171246|ENST00000306773|NPTX1 1.7340200742085774 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14594 76.878 14.0 3850900.0 25 0 328780.0 -1 QGRMTLTGI 9 86 496.762976910448 991.511400887696 2 496.7626830935478 MULTI CID FTMS 0 0 0 14591 3349065.25 0.6006754283338586 -1 0.1013717651367187 3 Oxidation (M) _QGRM(Oxidation (M))TLTGI_ ENSG00000122861|ENST00000372764|PLAU;nc|ENSG00000122861|P00749-2|PLAU 11.640296217721598 0.521594087909532 4 P{I|L}KG{I|L} 5 -1 21.146 0.0 0.0 2.1327 0.0 0.0 465.16363585038965 0.0 465.16363585038965 0.0 2.161610972817922 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}KG{I|L} 2.1327 - 189 + 1 1.225 45686.6 1.0 9716 4876 14591 HBL1_DMSO_200M_050219_2,14594 HBL1_DMSO_200M_050219_2,14594,QGRMTLTGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14595 76.879 27.0 2012300.0 25 0 259470.0 + 34966 SQLEDAIRL 9 59 522.7866207075947 1043.5586884819893 2 522.7877685427666 MULTI CID FTMS 0 0 0 14591 1603738.375 0.9460303122696893 1 -0.11114501953125 4 Unmodified _SQLEDAIRL_ ENSG00000151746|ENST00000652176|BICD1;ENSG00000185963|ENST00000356884|BICD2;nc|ENSG00000151746|Q96G01-3|BICD1;nc|ENSG00000151746|Q96G01-4|BICD1;nc|ENSG00000185963|Q8TD16|BICD2 41.95555342248728 0.0647214845423414 4 {[QS]|[NT]}{I|L}EDA{I|L}R{I|L} 9 0 + 71.577 0.0 0.0 6.8589 6.8589 93.816 0.0 0.0 0.0 64.5872875024979 10.20181229336984 10.20181229336984 38.21456278567765 0 0.9247425010840048 1.3010299956639813 0.4247425010840047 0.0 + + {[QS]|[NT]}{I|L}EDA{I|L}R{I|L};{[QS]|[NT]}{I|L}{I|L}HHN[VP];{[QS]|[NT]}{I|L}[Q{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VP];{[QS]|[NT]}{I|L}{I|L}HHGG[VP] 6.8589;3.197;2.3339;2.3146 +;-;-;- + 157 + 1 1.225 48730.1 1.0 9717 4876 14591 HBL1_DMSO_200M_050219_2,14595 HBL1_DMSO_200M_050219_2,14595,SQLEDAIRL True True SQLEDAIRL 76.879448 522.787768542767 28466110.0 14591.0 nc|ENSG00000151746|Q96G01-4|BICD1;;ENSG00000151746|ENST00000652176|BICD1;;nc|ENSG00000151746|Q96G01-3|BICD1;;nc|ENSG00000185963|Q8TD16|BICD2;;ENSG00000185963|ENST00000356884|BICD2 5.1475264231363935 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14596 76.881 66.0 907410.0 25 0 194450.0 35307 SSRNVKVRYL 10 73 611.3562878849376 1220.6980228366751 2 611.3566161990166 MULTI CID FTMS 0 0 0 14591 1001617.25 0.3894381306669567 4 -0.37860107421875 5 Unmodified _SSRNVKVRYL_ ENST00000487196.1_1_10:5800911-5803598:+|nuORF 1.4819007175156935 0.719781833666733 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.225 49909.8 1.0 9718 4876 14591 HBL1_DMSO_200M_050219_2,14596 HBL1_DMSO_200M_050219_2,14596,SSRNVKVRYL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14597 76.883 61.0 752130.0 25 0 102710.0 + 4085 DANFVIVV 8 74 438.74369522939554 875.4728375255911 2 438.7437927126884 MULTI CID FTMS 0 0 0 14591 793757.875 0.5675168043633476 -1 0.1013717651367187 6 Unmodified _DANFVIVV_ REV__ENSG00000128581|ENST00000315322|IFT22;REV__ENST00000468833.1_1_7:100959585-100959801:-|nuORF;REV__nc|ENSG00000128581|Q9H7X7-2|IFT22;REV__nc|ENSG00000128581|Q9H7X7-3|IFT22 21.74664581756881 0.5868176546531598 4 {[DA]|[EG]}AP 4 -1 36.559 0.0 0.0 4.176 0.0 0.0 0.0 518.2983492486936 518.2983492486936 13.600592417808016 0.0 0.0 0.0 0 0.7887254899964358 1.3979400086720375 0.0 0.0 {[DA]|[EG]}AP 4.176 - 61 + 1 1.225 43454.9 1.0 9719 4876 14591 HBL1_DMSO_200M_050219_2,14597 HBL1_DMSO_200M_050219_2,14597,DANFVIVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14598 76.884 79.0 1177400.0 25 0 135660.0 + -1 VEGAGMSLL 9 86 446.7260462964681 891.4375396597362 2 446.7266113162041 MULTI CID FTMS 0 0 0 14591 754791.4375 0.7815806516727827 -1 0.1013717651367187 7 Oxidation (M) _VEGAGM(Oxidation (M))SLL_ REV__ENSG00000140157|ENST00000337451|NIPA2 16.942295170755138 0.3780752226737986 4 ADANV{I|L} 6 -1 32.115 0.0 0.0 3.6027 0.0 0.0 0.0 305.1246431940063 305.1246431940063 2.64645333192 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ADANV{I|L} 3.6027 - 206 + 1 1.225 76964.1 1.0 9720 4876 14591 HBL1_DMSO_200M_050219_2,14598 HBL1_DMSO_200M_050219_2,14598,VEGAGMSLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14599 76.886 39.0 951350.0 25 0 141690.0 + -1 VAVSSTCLVI 10 73 524.7867035229187 1047.5588541126374 2 524.7876464724541 MULTI CID FTMS 0 0 0 14591 705091.0 1.0 0 0.0 8 Carbamidomethyl (C) _VAVSSTC(Carbamidomethyl (C))LVI_ REV__ENSG00000091262|ENST00000205557|ABCC6;REV__ENST00000574094.5_1_16:16275679-16317348:-|nuORF;REV__nc|ENSG00000091262|O95255-3|ABCC6 20.453626601364224 0.5043500229302764 4 [YN]{I|L} 3 -1 21.427 0.0 0.0 2.0454 0.0 0.0 0.0 654.3457858355467 654.3457858355467 -0.7010752059608905 0.0 -0.7010752059608905 0.0 0 0.0 2.0 0.0 0.0 [YN]{I|L} 2.0454 - 234 1 1.225 39672.5 1.0 9721 4876 14591 HBL1_DMSO_200M_050219_2,14599 HBL1_DMSO_200M_050219_2,14599,VAVSSTCLVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14600 76.888 100.0 519520.0 25 0 63938.0 + 12393 GTIGGGIFQA 10 75 460.74538138012485 919.4762098270496 2 460.7455932497978 MULTI CID FTMS 0 0 0 14591 625838.0625 0.4634154186400625 2 -0.1659927368164062 9 Unmodified _GTIGGGIFQA_ ENSG00000134375|ENST00000367287|TIMM17A;ENST00000478378.5_1_1:201924654-201931951:+|nuORF;ENST00000484647.1_1_1:201924654-201926725:+|nuORF 25.399314129420983 0.3980215340001851 4 {M(Oxidation (M))|F}QA 3 7 20.942 0.0 0.0 2.2776 0.0 0.0 555.3010827291967 0.0 555.3010827291967 0.0 8.239087409443185 0.0 0.0 0 0.0 0.0 0.0 1.0 + {M(Oxidation (M))|F}QA 2.2776 + + 205 + 1 1.225 44527.3 1.0 9722 4876 14591 HBL1_DMSO_200M_050219_2,14600 HBL1_DMSO_200M_050219_2,14600,GTIGGGIFQA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14601 76.889 63.0 397840.0 25 0 24039.0 + -1 TLHNICFRF 9 59 604.3052610747856 1206.595969216371 2 604.3055297732353 MULTI CID FTMS 0 0 0 14591 566515.8125 0.366347040759174 2 -0.1659927368164062 10 Carbamidomethyl (C) _TLHNIC(Carbamidomethyl (C))FRF_ REV__ENSG00000136161|ENST00000344532|RCBTB2;REV__nc|ENSG00000136161|O95199-2|RCBTB2 7.289230182591677 0.6602208344931196 4 T{I|L} 2 -1 17.787 0.0 0.0 1.4741 0.0 0.0 974.453068681018 0.0 974.453068681018 0.0 3.081597033474422 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T{I|L} 1.4741 + + 22 + 1 1.225 23618.7 1.0 9723 4876 14591 HBL1_DMSO_200M_050219_2,14601 HBL1_DMSO_200M_050219_2,14601,TLHNICFRF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14602 76.893 219.0 320940.0 25 0 23355.0 -1 0 81 634.3154141324094 1899.924412997428 3 634.6504394412041 MULTI CID FTMS 0 0 0 14591 263649.25 0.6506815485968752 -2 0.2033309936523437 11 4 A{M(Oxidation (M))|F}YQV{I|L} 6 -1 33.703 0.0 0.0 1.7739 0.0 0.0 1160.5340215913477 0.0 1160.5340215913477 0.0 5.286596949921218 0.0 0.0 0 0.6435078169319297 0.0 0.0 0.4247425010840047 A{M(Oxidation (M))|F}YQV{I|L} 1.7739 - 194 1 1.225 63583.4 1.0 9724 4876 14591 HBL1_DMSO_200M_050219_2,14602 HBL1_DMSO_200M_050219_2,14602, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14603 76.898 264.0 260030.0 25 0 27963.0 + 17363 KLYTDFDEI 9 99 572.281509891353 1142.548466849506 2 572.2820922732353 MULTI CID FTMS 0 0 0 14591 210017.234375 0.7129857360448474 -1 0.1013717651367187 12 Unmodified _KLYTDFDEI_ ENSG00000087470|ENST00000549701|DNM1L;ENST00000551076.5_1_12:32832273-32863873:+|nuORF;nc|ENSG00000087470|O00429-2|DNM1L;nc|ENSG00000087470|O00429-3|DNM1L;nc|ENSG00000087470|O00429-4|DNM1L;nc|ENSG00000087470|O00429-5|DNM1L;nc|ENSG00000087470|O00429-6|DNM1L;nc|ENSG00000087470|O00429-8|DNM1L;nc|ENSG00000087470|O00429-9|DNM1L 23.78978130925829 0.2284941198415988 4 A[{I|L}T]TD{M(Oxidation (M))|F}DE{I|L} 9 2 51.068 0.0 0.0 4.4696 0.0 0.0 119.07396132636876 0.0 119.07396132636876 0.0 26.86426927290973 0.0 0.0 0 0.4247425010840047 0.0 1.1237125054200234 0.0 A[{I|L}T]TD{M(Oxidation (M))|F}DE{I|L} 4.4696 - 498 1 1.225 58783.9 1.0 9725 4876 14591 HBL1_DMSO_200M_050219_2,14603 HBL1_DMSO_200M_050219_2,14603,KLYTDFDEI False True KLYTDFDEI 76.898281 572.282092273235 2140909.0 14591.0 nc|ENSG00000087470|O00429-5|DNM1L;;nc|ENSG00000087470|O00429-6|DNM1L;;nc|ENSG00000087470|O00429-9|DNM1L;;nc|ENSG00000087470|O00429-4|DNM1L;;ENSG00000087470|ENST00000549701|DNM1L;;nc|ENSG00000087470|O00429-3|DNM1L;;ENST00000551076.5_1_12:32832273-32863873:+|nuORF;;nc|ENSG00000087470|O00429-8|DNM1L;;nc|ENSG00000087470|O00429-2|DNM1L 4.589594920476277 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14604 76.911 733.0 148330.0 25 0 7078.6 + + -1 IPYQPMPASSPVI 13 145 700.3671375866105 1398.719722240021 2 700.3669921755791 MULTI CID FTMS 0 0 0 14591 190326.75 1.0 0 0.0 13 2 Carbamidomethyl (C) _PVC(Carbamidomethyl (C))C(Carbamidomethyl (C))LQKWVLP_ ENSG00000169564|ENST00000303577|PCBP1 10.073929032068715 0.8255972128077141 4 [VP]SS[MD]{I|L}PASS 11 -1 64.405 0.0 0.0 4.6045 0.0 0.0 0.0 324.190969739948 324.190969739948 45.98822356033952 0.0 0.0 0.0 0 1.1989700043360187 1.6989700043360187 1.0 0.0 [VP]SS[MD]{I|L}PASS 4.6045 - 1725 1 1.225 79736.2 1.0 9726 4876 14591 HBL1_DMSO_200M_050219_2,14604 HBL1_DMSO_200M_050219_2,14604,PVCCLQKWVLP False False IPYQPMPASSPVI 76.910994 700.366992175579 2364031.5 14591.0 ENSG00000169564|ENST00000303577|PCBP1 6.045393625895183 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14605 76.925 784.0 290010.0 25 0 55717.0 -1 0 112 1097.797093537018 3290.3694512112543 3 1098.131518542767 MULTI CID FTMS 0 0 0 14591 180443.03125 0.2901057381397166 -3 0.2836151123046875 14 4 Y[YC(Carbamidomethyl (C))]T{I|L}TVNAN 10 -1 29.982 0.0 0.0 0.91121 0.0 0.0 1781.6256290450417 306.18210779361567 2087.807736838657 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 1.5941876774005248 Y[YC(Carbamidomethyl (C))]T{I|L}TVNAN 0.91121 - 1773 + 1 1.225 180472.7 1.0 9727 4876 14591 HBL1_DMSO_200M_050219_2,14605 HBL1_DMSO_200M_050219_2,14605, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14606 76.929 239.0 592330.0 25 0 39712.0 11066 GEARCFQP 8 137 454.2087465202601 0 454.2088500857353 PEAK CID FTMS 0 0 0 14591 176735.5625 0.5426449578158867 -2 0.2033309936523437 15 Unmodified _GEARCFQP_ ENST00000464434.1_1_7:45018499-45018613:-|nuORF 11.640296217721598 0.5231213682848052 4 ADA[YC(Carbamidomethyl (C))]{I|L} 6 6 18.174 0.0 0.0 2.0051 0.0 0.0 144.06512778035273 66.03575311832265 210.10088089867537 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 ADA[YC(Carbamidomethyl (C))]{I|L} 2.0051 - 224 + 1 1.225 110780.5 1.0 9728 4876 14591 HBL1_DMSO_200M_050219_2,14606 HBL1_DMSO_200M_050219_2,14606,GEARCFQP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14607 76.934 257.0 422420.0 25 0 89931.0 + -1 DPGPILRI 8 115 440.24065292539154 439.2333764587916 1 441.2446777224541 MULTI CID FTMS 0 0 0 14591 143308.046875 0.6230160784171477 3 -0.2745208740234375 16 ENSG00000168016|ENST00000645898|TRANK1;nc|ENSG00000168016|O15050|TRANK1 4 [DP]G 3 -1 25.022 0.0 0.0 5.6968 0.0 0.0 0.0 167.10860603534692 167.10860603534692 12.803943707888765 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.6861818737241735 0.0 [DP]G 5.6968 - 19 1 1.225 89336.8 1.0 9729 4876 14591 HBL1_DMSO_200M_050219_2,14607 HBL1_DMSO_200M_050219_2,14607, False False DPGPILRI 76.933814 441.244677722454 43734596.0 14591.0 ENSG00000168016|ENST00000645898|TRANK1;;nc|ENSG00000168016|O15050|TRANK1 4.284924666086833 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14608 76.949 800.0 166890.0 25 0 27464.0 -1 0 95 1077.9484092699977 2153.882265606795 2 1077.950976550579 MULTI CID FTMS 0 0 0 14591 136894.84375 0.4709420356539598 -1 0.1013717651367187 17 4 Y{[SA]|[TG]}DMYV[R{M(Oxidation (M))|F}]{[QG]|[NA]} 11 -1 26.242 0.0 0.0 1.2183 0.0 0.0 818.3318217963538 0.0 818.3318217963538 0.0 11.091223126737653 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{[SA]|[TG]}DMYV[R{M(Oxidation (M))|F}]{[QG]|[NA]} 1.2183 - 209 1 1.225 105027.8 0.949999988079071 9730 4876 14591 HBL1_DMSO_200M_050219_2,14608 HBL1_DMSO_200M_050219_2,14608, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14609 76.963 800.0 186410.0 25 0 11714.0 + -1 DAYVLRMRRR 10 171 451.24992000490295 1350.727930614909 3 451.2498046755791 MULTI CID FTMS 0 0 0 14591 131461.234375 1.0 0 0.0 18 Oxidation (M) _DAYVLRM(Oxidation (M))RRR_ REV__ENSG00000162390|ENST00000343744|ACOT11;REV__ENST00000498228.1_1_1:55014277-55063089:+|nuORF;REV__nc|ENSG00000162390|Q8WXI4|ACOT11 7.0370850670814 0.6940858557465671 4 {I|L}Y 2 -1 16.454 0.0 0.0 1.2181 0.0 0.0 1056.5696797377589 0.0 1056.5696797377589 0.0 1.2324929039790078 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y 1.2181 - 509 + 1 1.225 121432.0 0.7099999785423279 9731 4876 14591 HBL1_DMSO_200M_050219_2,14609 HBL1_DMSO_200M_050219_2,14609,DAYVLRMRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14610 76.968 271.0 237990.0 25 0 12232.0 + 29408 QLECVIYNQEL 11 101 676.3323242068291 0 676.3323242068291 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _QLECVIYNQEL_ REV__ENSG00000178105|ENST00000322536|DDX10 7.608950283845883 0.472344094183283 4 AWT 3 -1 17.272 0.0 0.0 1.2788 0.0 0.0 806.4198780384917 183.04181848697505 989.4616965254668 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 AWT 1.2788 - 143 + 1 1.225 53315.8 1.0 9732 4876 14591 HBL1_DMSO_200M_050219_2,14610 HBL1_DMSO_200M_050219_2,14610,QLECVIYNQEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14611 76.983 800.0 441620.0 25 0 52357.0 -1 0 119 1094.1372155054014 3279.3898171164046 3 1094.470874011517 MULTI CID FTMS 0 0 0 14591 121439.7109375 0.4682226190542172 -1 0.1013717651367187 20 4 VQGEG{I|L}D 7 -1 44.351 0.0 0.0 1.3524 0.0 0.0 2202.9813220986293 375.0443514459594 2578.0256735445887 0.0 0.0 0.0 0.0 0 0.0 0.0 1.5189301784845295 0.6237125054200234 VQGEG{I|L}D 1.3524 - 4695 + 1 1.225 237229.8 0.959999978542328 9733 4876 14591 HBL1_DMSO_200M_050219_2,14611 HBL1_DMSO_200M_050219_2,14611, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14613 76.987 8.4 5750000.0 25 0 515820.0 + 43612 YAFPKSITV 9 75 513.2870682780165 1024.5595836228329 2 513.2875854372978 MULTI CID FTMS 0 0 0 14612 5350614.0 0.6375034939522755 2 -0.1633758544921875 1 Unmodified _YAFPKSITV_ ENSG00000155380|ENST00000369626|SLC16A1;nc|ENSG00000155380|P53985-2|SLC16A1 30.63653989081413 0.1413794767160703 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}P 4 5 38.06 0.0 0.0 3.7147 0.0 0.0 0.0 543.3158663385374 543.3158663385374 11.571362609069736 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}P 3.7147 + + 138 + 1 1.223 41695.6 1.0 9734 4877 14612 HBL1_DMSO_200M_050219_2,14613 HBL1_DMSO_200M_050219_2,14613,YAFPKSITV False True YAFPKSITV 76.987062 513.287585437298 284398104.0 14612.0 nc|ENSG00000155380|P53985-2|SLC16A1;;ENSG00000155380|ENST00000369626|SLC16A1 5.467645804087321 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14614 76.988 31.0 1704100.0 25 0 263630.0 40419 VIGFLLAV 8 65 416.2705048077563 830.5264566823126 2 416.2705871462822 MULTI CID FTMS 0 0 0 14612 1356598.375 0.1134720847546985 3 -0.2674560546875 2 Unmodified _VIGFLLAV_ ENSG00000167165|ENST00000305139|UGT1A6;ENSG00000241119|ENST00000354728|UGT1A9;ENSG00000241635|ENST00000305208|UGT1A1;ENSG00000242366|ENST00000373450|UGT1A8;ENSG00000242515|ENST00000344644|UGT1A10;ENSG00000244122|ENST00000373426|UGT1A7;ENSG00000244474|ENST00000373409|UGT1A4;ENST00000450233.1_1_2:234678284-234681202:+|nuORF;nc|ENSG00000167165|P19224-2|UGT1A6;nc|ENSG00000288702|P35503|UGT1A3;nc|ENSG00000288705|P35504|UGT1A5 24.20995872069341 0.5349487244130675 4 [{I|L}V][KP]{I|L}YV 7 4 + 35.991 0.0 0.0 4.3335 4.3335 83.656 0.0 0.0 0.0 6.237577350063788 11.804782212094338 6.237577350063788 35.99107903826933 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}V][KP]{I|L}YV 4.3335 - 75 + 1 1.223 45496.9 1.0 9735 4877 14612 HBL1_DMSO_200M_050219_2,14614 HBL1_DMSO_200M_050219_2,14614,VIGFLLAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14615 76.989 7.5 7800400.0 25 0 763500.0 + 10496 FTVDQIRAI 9 68 531.8007864541105 1061.587019975021 2 531.8009521365166 MULTI CID FTMS 0 0 0 14612 7047700.0 1.0 0 0.0 3 Unmodified _FTVDQIRAI_ ENSG00000167658|ENST00000309311|EEF2;ENST00000594885.1_1_19:3984132-3985378:-|nuORF 62.57269311338072 0.0246576765497938 4 {M(Oxidation (M))|F}TVDQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 9 0 + 66.986 0.0 0.0 6.31 6.31 86.843 0.0 0.0 0.0 54.99668131245279 6.720449851406514 6.720449851406514 9.208187539523747 0 0.7614393726401688 0.0 0.0 1.174742501084005 + + {M(Oxidation (M))|F}TVDQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{M(Oxidation (M))|F}TVD[AG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{M(Oxidation (M))|F}[WE]Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 6.31;5.4426;3.4583 +;-;- + 76 + 1 1.223 52125.0 1.0 9736 4877 14612 HBL1_DMSO_200M_050219_2,14615 HBL1_DMSO_200M_050219_2,14615,FTVDQIRAI True True FTVDQIRAI 76.989418 531.800952136517 94138768.0 14612.0 ENSG00000167658|ENST00000309311|EEF2;;ENST00000594885.1_1_19:3984132-3985378:-|nuORF 6.652604738871257 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14616 76.991 22.0 3440700.0 25 0 893720.0 + 32265 RWPDYVREL 9 50 617.3224849501827 1232.6304169671653 2 617.3226806521416 MULTI CID FTMS 0 0 0 14612 2559012.75 1.0 0 0.0 4 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 28.49450938151212 0.1686335738423394 4 RW[DP]{I|L} 5 4 44.425 0.0 0.0 3.6041 0.0 0.0 0.0 562.2660006158811 562.2660006158811 20.71333751784365 0.0 0.0 0.0 0 1.424742501084005 1.3979400086720375 0.0 0.0 RW[DP]{I|L} 3.6041 - 38 + 1 1.223 61967.5 1.0 9737 4877 14612 HBL1_DMSO_200M_050219_2,14616 HBL1_DMSO_200M_050219_2,14616,RWPDYVREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14617 76.992 21.0 3168200.0 25 0 335220.0 + 3953 DALLKFSHI 9 94 522.2974255226185 1042.5802981120369 2 522.2981445193291 MULTI CID FTMS 0 0 0 14612 1805630.375 0.1216250803590385 -3 0.3144760131835937 5 Unmodified _DALLKFSHI_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 59.36838082759317 0.0264317782606298 4 DA{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L} 9 0 + 94.128 0.0 0.0 9.0283 9.0283 97.964 0.0 0.0 0.0 78.41428165933429 11.082268588648247 11.082268588648247 32.80639424355677 0 1.8494850021680087 1.6989700043360187 0.6861818737241735 0.0 + + DA{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L};DA{I|L}{I|L}K[C(Carbamidomethyl (C))K][VP];DA{I|L}{I|L}K[KC]G[VP];DA{I|L}{I|L}{I|L}[{M(Oxidation (M))|F}V]G[VP];DVVVK{M(Oxidation (M))|F}SH{I|L};DV{I|L}E[W{I|L}]R{I|L};{I|L}{I|L}{M(Oxidation (M))|F}EK[TP][VP];DV{I|L}M{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VP];[{I|L}T]G[{M(Oxidation (M))|F}V][VS]AH{I|L};DVVVK[C(Carbamidomethyl (C))K][VP] 9.0283;5.8817;5.6976;5.24;5.2186;2.2838;1.9694;1.6094;1.6034;1.5923 +;-;-;-;-;-;-;-;-;- + 766 + 1 1.223 55187.5 1.0 9738 4877 14612 HBL1_DMSO_200M_050219_2,14617 HBL1_DMSO_200M_050219_2,14617,DALLKFSHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14618 76.993 33.0 1795000.0 25 0 387860.0 28859 QAIKLYLR 8 72 502.8141560637919 1003.6137591943838 2 502.8142578005791 MULTI CID FTMS 0 0 0 14612 1760448.5 0.9216950549063996 -2 0.2125167846679687 6 Unmodified _QAIKLYLR_ ENSG00000186377|ENST00000371901|CYP4X1 5.760428011301431 0.7893668129297577 4 {I|L} 1 7 6.9897 0.0 0.0 0.69645 0.0 0.0 295.16034230160875 592.3477266900999 887.5080689917086 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.69645 + + 14 + 1 1.223 52646.2 1.0 9739 4877 14612 HBL1_DMSO_200M_050219_2,14618 HBL1_DMSO_200M_050219_2,14618,QAIKLYLR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14619 76.994 43.0 1511200.0 25 0 177020.0 + 32657 SDAIPGLKI 9 79 457.27116340172114 912.5277738702424 2 457.2712890505791 MULTI CID FTMS 0 0 0 14612 1443233.875 0.7313408917049142 1 -0.0548477172851562 7 Unmodified _SDAIPGLKI_ ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15 36.12702656103203 0.0967173616627612 4 {[DS]|[MA]|[CV]|TT}A{I|L}PG{I|L}K{I|L} 9 0 + 36.041 0.0 0.0 3.9496 3.9496 73.345 0.0 0.0 0.0 16.832750158095003 2.4350126370841707 2.4350126370841707 5.740312677277192 0 1.0 0.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}A{I|L}PG{I|L}K{I|L};{[DS]|[MA]|[CV]|TT}A{I|L}{I|L}[PG]K{I|L} 3.9496;3.3205 +;- + 102 + 1 1.223 54215.8 1.0 9740 4877 14612 HBL1_DMSO_200M_050219_2,14619 HBL1_DMSO_200M_050219_2,14619,SDAIPGLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14620 76.995 37.0 1682100.0 25 0 143470.0 + 21720 LPLSSLTHV 9 86 483.7841137772406 965.5536746212812 2 483.7848083376884 MULTI CID FTMS 0 0 0 14612 1205694.875 0.8640477876283769 1 -0.0548477172851562 8 Unmodified _LPLSSLTHV_ ENSG00000115942|ENST00000234296|ORC2 48.345845343767074 0.0439967357579942 4 {I|L}P{I|L}SS{I|L}HS{I|L} 9 3 + 84.819 0.0 0.0 8.7844 8.7844 84.395 0.0 0.0 0.0 36.47817481888637 2.7815125038364386 2.7815125038364386 2.7815125038364386 0 0.4247425010840047 2.0 0.6237125054200234 0.0 {I|L}P{I|L}SS{I|L}HS{I|L};{I|L}P{I|L}SS{I|L}THV;{I|L}P{I|L}SS{I|L}HTV;{I|L}P{I|L}S[HV]TS{I|L};{I|L}P{I|L}{[WT]|[RM]}HS{I|L};{I|L}P{I|L}S[HV]TTV;{I|L}P{I|L}{[WT]|[RM]}THV;{I|L}P{I|L}{[WT]|[RM]}HTV;{I|L}P{I|L}[QP][QA]S{I|L};{I|L}P{[WT]|[RM]}{I|L}HS{I|L} 8.7844;8.4964;8.3907;6.9719;6.7951;6.5781;6.507;6.4013;6.1476;6.0434 -;+;-;-;-;-;-;-;-;- + 234 + 1 1.223 55964.7 1.0 9741 4877 14612 HBL1_DMSO_200M_050219_2,14620 HBL1_DMSO_200M_050219_2,14620,LPLSSLTHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14621 76.997 59.0 1093600.0 25 0 223180.0 + 3791 DAIAEIRAI 9 74 486.2795054354033 970.5444579376066 2 486.2798034548759 MULTI CID FTMS 0 0 0 14612 1048108.625 0.8177593978700083 1 -0.0548477172851562 9 Unmodified _DAIAEIRAI_ ENSG00000101972|ENST00000371145|STAG2;ENSG00000118007|ENST00000383202|STAG1;nc|ENSG00000101972|Q8N3U4|STAG2;nc|ENSG00000118007|Q8WVM7-2|STAG1 31.26834338654808 0.1333407332142048 4 {[DA]|[EG]}{I|L}AE{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 9 0 + 68.874 0.0 0.0 7.0964 7.0964 95.276 0.0 0.0 0.0 51.42667503568731 6.962724883926654 6.962724883926654 68.87394998465425 0 1.3494850021680094 2.0 0.0 0.3494850021680094 + + {[DA]|[EG]}{I|L}AE{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 7.0964 + + 105 + 1 1.223 54780.4 1.0 9742 4877 14612 HBL1_DMSO_200M_050219_2,14621 HBL1_DMSO_200M_050219_2,14621,DAIAEIRAI False True DAIAEIRAI 76.996803 486.279803454876 9175543.0 14612.0 ENSG00000101972|ENST00000371145|STAG2;;nc|ENSG00000101972|Q8N3U4|STAG2;;nc|ENSG00000118007|Q8WVM7-2|STAG1;;ENSG00000118007|ENST00000383202|STAG1 3.494891802469889 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14622 76.998 27.0 1498300.0 25 0 178500.0 + + -1 SQVDAQLLTV 10 82 537.2898621748571 0 537.2921630740166 PEAK CID FTMS 0 0 0 14612 1071626.0 0.868591358491625 -1 0.11114501953125 10 Oxidation (M) _LTPPM(Oxidation (M))WITV_ nc|ENSG00000103549|O75150-4|RNF40;ENSG00000103549|ENST00000324685|RNF40 16.942295170755138 0.2326366549411506 4 HT 2 -1 13.469 0.0 0.0 1.2558 0.0 0.0 717.3778372874111 114.0566881769164 831.4345254643275 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5994850021680094 0.0 HT 1.2558 - 100 + 1 1.223 38622.1 1.0 9743 4877 14612 HBL1_DMSO_200M_050219_2,14622 HBL1_DMSO_200M_050219_2,14622,LTPPMWITV False False SQVDAQLLTV 76.997982 537.292163074017 10500632.0 14612.0 nc|ENSG00000103549|O75150-4|RNF40;;ENSG00000103549|ENST00000324685|RNF40 1.4715035408735275 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14623 77.0 68.0 954060.0 25 0 77116.0 + 32062 RVLEKPESLLL 11 66 648.8978150747035 1295.781077216207 2 648.8982421755791 MULTI CID FTMS 0 0 0 14612 918543.625 1.0 0 0.0 11 Unmodified _RVLEKPESLLL_ ENSG00000137221|ENST00000372449|TJAP1;ENST00000454762.1_1_6:43472456-43473590:+|nuORF;nc|ENSG00000137221|Q5JTD0-2|TJAP1;nc|ENSG00000137221|Q5JTD0-4|TJAP1 28.270515756011903 0.428402293028943 4 [EP]S{I|L}K{I|L}[RD]{I|L}{I|L}{I|L} 11 7 + 67.343 0.0 0.0 5.1971 5.1971 77.83 0.0 0.0 0.0 5.388728364440148 8.4948500216801 5.388728364440148 5.388728364440148 0 0.6989700043360187 1.154901959985743 0.7614393726401688 0.0 [EP]S{I|L}K{I|L}[RD]{I|L}{I|L}{I|L};{I|L}{I|L}[RD]K[EP]S{I|L}{I|L}{I|L};{I|L}{I|L}[RD]K{I|L}S[EP]{I|L}{I|L};{I|L}{I|L}[RD]G{I|L}[PS]S{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[EP]K{I|L}[RD]{I|L}{I|L}{I|L};[TP]D{I|L}K{I|L}[RD]{I|L}{I|L}{I|L} 5.1971;4.7812;4.5489;4.1648;3.8017;3.6536 -;-;-;-;-;- 260 1 1.223 52726.4 1.0 9744 4877 14612 HBL1_DMSO_200M_050219_2,14623 HBL1_DMSO_200M_050219_2,14623,RVLEKPESLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14624 77.001 57.0 999650.0 25 0 134170.0 + 20329 LLFEDRFRP 9 77 398.22006025462207 0 398.2204467654228 PEAK CID FTMS 0 0 0 14612 771969.25 1.0 0 0.0 12 Unmodified _LLFEDRFRP_ REV__ENST00000587714.1_1_18:59949550-59951479:+|nuORF 8.155526934196011 0.3334291183486324 4 S 1 -1 4.6041 0.0 0.0 0.57955 0.0 0.0 334.6938608883473 369.6787508600219 704.3726117483692 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.57955 - 11 + 1 1.223 49700.0 1.0 9745 4877 14612 HBL1_DMSO_200M_050219_2,14624 HBL1_DMSO_200M_050219_2,14624,LLFEDRFRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14625 77.004 122.0 601330.0 25 0 99457.0 9727 FLYKLKGDRAV 11 95 655.3823079751647 1308.7500630171294 2 655.3823119997978 MULTI CID FTMS 0 0 0 14612 657355.125 0.8749360914646147 -2 0.2125167846679687 13 Unmodified _FLYKLKGDRAV_ ENSG00000070019|ENST00000261170|GUCY2C 6.723162845929126 0.8434276150410019 4 WAV 3 9 15.662 0.0 0.0 1.1967 0.0 0.0 934.555099493495 0.0 934.555099493495 0.0 6.197887582883938 0.0 0.0 0 0.0 0.0 0.0 0.0 WAV 1.1967 - 82 + 1 1.223 73799.2 1.0 9746 4877 14612 HBL1_DMSO_200M_050219_2,14625 HBL1_DMSO_200M_050219_2,14625,FLYKLKGDRAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14626 77.005 44.0 1127300.0 25 0 93875.0 26003 NLVLYQIPAT 10 95 566.3222210154946 1130.6298890977891 2 566.3219482302666 MULTI CID FTMS 0 0 0 14612 604688.0 1.0 0 0.0 14 Unmodified _NLVLYQIPAT_ ENST00000217173.6_1_20:3089740-3090079:-|nuORF 5.731851221503515 0.7001233259664787 4 T 1 9 13.427 0.0 0.0 1.1875 0.0 0.0 1011.571072119565 0.0 1011.571072119565 0.0 2.4575797854329817 0.0 0.0 0 0.0 0.0 0.1643943297944484 0.0 + T 1.1875 + + 39 + 1 1.223 41933.9 1.0 9747 4877 14612 HBL1_DMSO_200M_050219_2,14626 HBL1_DMSO_200M_050219_2,14626,NLVLYQIPAT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14627 77.013 449.0 393820.0 25 0 54802.0 + -1 ACQPECGMTV 10 204 548.2146923404074 1094.4148317476147 2 548.2155029177666 MULTI CID FTMS 0 0 0 14612 503798.53125 1.0 0 0.0 15 Carbamidomethyl (C) _AC(Carbamidomethyl (C))QPECGMTV_ REV__ENSG00000117983|ENST00000529681|MUC5B;REV__ENSG00000117983|ENST00000529681|MUC5B 14.838274106304384 0.5985701837916485 4 DGQW[{I|L}V] 6 -1 27.369 0.0 0.0 2.5008 0.0 0.0 378.0670749551288 0.0 378.0670749551288 0.0 7.510191685483594 0.0 0.0 0 0.3494850021680094 0.0 0.6747425010840047 0.8252574989159953 DGQW[{I|L}V] 2.5008 - 639 1 1.223 140073.2 1.0 9748 4877 14612 HBL1_DMSO_200M_050219_2,14627 HBL1_DMSO_200M_050219_2,14627,ACQPECGMTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14628 77.016 180.0 501230.0 25 0 49752.0 + 34629 SPLWKVSI 8 119 465.2765020370155 928.5384511408312 2 465.2765075564384 MULTI CID FTMS 0 0 0 14612 496808.8125 0.3177253700454819 3 -0.2674560546875 16 Unmodified _SPLWKVSI_ REV__ENSG00000115414|ENST00000354785|FN1;REV__ENST00000490833.5_1_2:216246727-216248186:-|nuORF;REV__ENST00000492816.6_1_2:216246929-216248186:-|nuORF;REV__nc|ENSG00000115414|P02751-1|FN1;REV__nc|ENSG00000115414|P02751-10|FN1;REV__nc|ENSG00000115414|P02751-11|FN1;REV__nc|ENSG00000115414|P02751-12|FN1;REV__nc|ENSG00000115414|P02751-13|FN1;REV__nc|ENSG00000115414|P02751-14|FN1;REV__nc|ENSG00000115414|P02751-17|FN1;REV__nc|ENSG00000115414|P02751-3|FN1;REV__nc|ENSG00000115414|P02751-4|FN1;REV__nc|ENSG00000115414|P02751-5|FN1;REV__nc|ENSG00000115414|P02751-6|FN1;REV__nc|ENSG00000115414|P02751-7|FN1;REV__nc|ENSG00000115414|P02751-8|FN1;REV__nc|ENSG00000115414|P02751-9|FN1 30.22481116460888 0.4082965392918993 4 K[{I|L}P]S{I|L} 5 -1 27.58 0.0 0.0 2.9703 0.0 0.0 372.1782959668061 0.0 372.1782959668061 0.0 15.986198691406326 0.0 0.0 0 0.4247425010840047 0.0 0.7134679910804405 0.0 K[{I|L}P]S{I|L} 2.9703 - 347 + 1 1.223 74844.9 1.0 9749 4877 14612 HBL1_DMSO_200M_050219_2,14628 HBL1_DMSO_200M_050219_2,14628,SPLWKVSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14629 77.02 202.0 672680.0 25 0 114640.0 33516 SILARLVL 8 103 442.79977757158326 883.5850022099665 2 442.8000060915947 MULTI CID FTMS 0 0 0 14612 474647.25 0.0428330579452105 -4 0.3947601318359375 17 Unmodified _SILARLVL_ AluSg_dup36345|chr22:39033812-39034106:-|1.7183411907320236|0.3290854125150665|2.38|48.0|14|1|anti-sense 50.855029805455786 0.1352255786796883 4 [{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV{I|L} 8 3 + 55.94 0.0 0.0 6.331 6.331 79.41 0.0 0.0 0.0 6.897737521010825 45.13917635752814 6.897737521010825 3.138181262758266 0 1.1861818737241734 1.3979400086720375 0.8252574989159953 0.3252574989159953 [{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}V{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S{I|L}{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}TV{I|L}{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GKK;[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K[KG];[{I|L}V]W[K{I|L}]{I|L}{I|L} 6.331;5.9759;5.005;4.6498;2.7104;2.3698;2.286 -;-;-;-;-;-;- 226 1 1.223 110678.0 1.0 9750 4877 14612 HBL1_DMSO_200M_050219_2,14629 HBL1_DMSO_200M_050219_2,14629,SILARLVL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 14630 77.023 152.0 507040.0 25 0 58228.0 + 5451 DLQLVFWVM 9 105 575.8030747063212 1149.5915964794424 2 575.8032104372978 MULTI CID FTMS 0 0 0 14612 401137.09375 0.3520804099325593 -3 0.3144760131835937 18 Unmodified _DLQLVFWVM_ REV__ENSG00000164169|ENST00000322396|PRMT9;REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9 14.838274106304384 0.4350285940865338 4 [VS]PVSVW 7 -1 31.763 0.0 0.0 2.7629 0.0 0.0 0.0 392.16292151289866 392.16292151289866 16.05683937315561 0.0 0.0 0.0 0 0.0 0.5528419686577808 1.3494850021680094 0.0 [VS]PVSVW 2.7629 - 434 1 1.223 63031.2 1.0 9751 4877 14612 HBL1_DMSO_200M_050219_2,14630 HBL1_DMSO_200M_050219_2,14630,DLQLVFWVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14631 77.032 512.0 295840.0 25 0 21209.0 + + 45697 SILSTEDPNQLTV 13 158 708.8631835500214 1415.7118141668427 2 708.8649169802666 MULTI CID FTMS 0 0 0 14612 371861.09375 1.0 0 0.0 19 Unmodified _YWSKEFPFLTV_ nc|ENSG00000116044|Q16236-3|NFE2L2;ENSG00000116044|ENST00000397062|NFE2L2;nc|ENSG00000116044|Q16236-2|NFE2L2 26.268140514670165 0.4754186812857754 4 {[QN]|[E{I|L}]|[KN]}P{I|L}DTESTV{I|L}TV 13 -1 + 97.049 0.0 0.0 6.8552 6.8552 76.755 0.0 0.0 0.0 5.303727103776026 9.943508928956462 5.303727103776026 0.7968969065610167 0 0.8633643341304672 1.3010299956639813 1.0629529932484498 1.962602858053064 {[QN]|[E{I|L}]|[KN]}P{I|L}DTESTV{I|L}TV;{[QN]|[E{I|L}]|[KN]}P{I|L}DTES{I|L}S{I|L}TV;{[QN]|[E{I|L}]|[KN]}P{I|L}TDESTV{I|L}TV;{[QN]|[E{I|L}]|[KN]}P{I|L}TDES{I|L}S{I|L}TV;{[QG]|[NA]}GP{I|L}DTESTV{I|L}TV;{[QN]|[E{I|L}]|[KN]}PD{I|L}TESTV{I|L}TV;{[QN]|[E{I|L}]|[KN]}P{I|L}DETSTV{I|L}TV;{[QG]|[NA]}GP{I|L}DTES{I|L}S{I|L}TV;{[QN]|[E{I|L}]|[KN]}P{I|L}SEESTV{I|L}TV;{[QN]|[E{I|L}]|[KN]}PD{I|L}TES{I|L}S{I|L}TV 6.8552;6.7989;6.5654;6.5091;6.4805;6.4386;6.4299;6.4242;6.3969;6.3823 -;-;-;-;-;-;-;-;-;- 23208 1 1.223 109434.3 1.0 9752 4877 14612 HBL1_DMSO_200M_050219_2,14631 HBL1_DMSO_200M_050219_2,14631,YWSKEFPFLTV False False SILSTEDPNQLTV 77.032193 708.864916980267 2191218.25 14612.0 nc|ENSG00000116044|Q16236-3|NFE2L2;;ENSG00000116044|ENST00000397062|NFE2L2;;nc|ENSG00000116044|Q16236-2|NFE2L2 6.0461859703063965 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14632 77.038 292.0 489710.0 25 0 27458.0 19793 LGSLQPLPLGL 11 150 554.341440224548 1106.668327515896 2 554.3425170779228 MULTI CID FTMS 0 0 0 14612 377619.8125 1.0 0 0.0 20 Unmodified _LGSLQPLPLGL_ nc|ENSG00000148688|P78346-2|RPP30 27.22323531849824 0.4529927607131788 4 {[VA]|[{I|L}G]}PS{I|L}QP{I|L}{I|L}G{I|L} 11 2 + 69.646 0.0 0.0 6.2933 6.2933 83.79 0.0 0.0 0.0 6.704858559326922 6.132199167208071 6.132199167208071 6.704858559326922 0 0.9332722968711548 2.0 0.6989700043360187 0.9634679910804403 {[VA]|[{I|L}G]}PS{I|L}QP{I|L}{I|L}G{I|L};[EP]K{I|L}QP{I|L}{I|L}G{I|L};{[VA]|[{I|L}G]}PS{I|L}Q{I|L}P{I|L}G{I|L};[{I|L}P]GS{I|L}QP{I|L}{I|L}G{I|L};{[VA]|[{I|L}G]}PS{I|L}PQ{I|L}{I|L}G{I|L};[EP]K{I|L}Q{I|L}P{I|L}G{I|L};{[VA]|[{I|L}G]}AK[EP]P{I|L}{I|L}G{I|L};[EP]K{I|L}[AG]P{I|L}{I|L}G{I|L};[TP][VG]{I|L}QP{I|L}{I|L}G{I|L};[{I|L}P]GS{I|L}Q{I|L}P{I|L}G{I|L} 6.2933;5.6874;5.5683;5.369;5.153;4.9624;4.9188;4.8593;4.7379;4.644 -;-;-;-;-;-;-;-;-;- 1260 1 1.223 114077.6 1.0 9753 4877 14612 HBL1_DMSO_200M_050219_2,14632 HBL1_DMSO_200M_050219_2,14632,LGSLQPLPLGL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 14634 77.042 6.8 7911300.0 25 0 691220.0 + 21936 LPPKVSVFV 9 83 493.30756668585485 984.6005804385096 2 493.3080322146416 MULTI CID FTMS 0 0 0 14633 5395277.0 0.9027464839871536 14 -1.4629135131835938 1 Unmodified _LPPKVSVFV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 19.256988751693697 0.3154191944385105 4 {I|L}P 2 7 43.711 0.0 0.0 4.4395 0.0 0.0 0.0 771.441301220143 771.441301220143 17.10986299297708 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.4395 + + 113 + 1 1.223 48793.8 1.0 9754 4878 14633 HBL1_DMSO_200M_050219_2,14634 HBL1_DMSO_200M_050219_2,14634,LPPKVSVFV False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 14635 77.043 55.0 1344700.0 25 0 123130.0 + 32274 RWPDYVREL 9 79 411.88402130637087 1232.6302345193126 3 411.8839904665947 MULTI CID FTMS 0 0 0 14633 920159.625 0.7974185669234429 4 -0.364776611328125 2 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 47.594388314883695 0.0456443387682827 4 [WR]PDY 5 4 46.458 0.0 0.0 3.769 0.0 0.0 0.0 512.2825488603003 512.2825488603003 27.81259503816253 0.0 0.0 0.0 0 1.424742501084005 1.5228787452803376 0.3807196863200844 0.3252574989159953 + [WR]PDY 3.769 + + 137 1 1.223 63444.1 1.0 9755 4878 14633 HBL1_DMSO_200M_050219_2,14635 HBL1_DMSO_200M_050219_2,14635,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14636 77.045 43.0 1127900.0 25 0 87633.0 + 35741 SVIDIINGEAT 11 89 566.2978487988075 1130.581144664415 2 566.2989990115166 MULTI CID FTMS 0 0 0 14633 740794.125 0.5875271625902913 -2 0.1659927368164062 3 Unmodified _SVIDIINGEAT_ ENSG00000168090|ENST00000303904|COPS6 12.240655878213236 0.7805268987462184 4 T 1 10 13.793 0.0 0.0 1.22 0.0 0.0 1011.522243762851 0.0 1011.522243762851 0.0 3.308265975937834 0.0 0.0 0 0.0 0.0 0.1803115997617927 0.0 + T 1.22 + + 94 + 1 1.223 41009.1 1.0 9756 4878 14633 HBL1_DMSO_200M_050219_2,14636 HBL1_DMSO_200M_050219_2,14636,SVIDIINGEAT False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14637 77.046 49.0 966000.0 25 0 156360.0 -1 EIQKMQILV 9 77 559.3187731345965 0 559.3180419802666 PEAK CID FTMS 0 0 0 14633 572196.0 0.9647395310455524 -1 0.0548477172851562 4 Oxidation (M) _EIQKM(Oxidation (M))QILV_ ENSG00000064995|ENST00000361288|TAF11;nc|ENSG00000064995|Q15544-2|TAF11 20.453626601364224 0.1969592619112565 4 DYYTE 5 -1 13.244 0.0 0.0 1.1861 0.0 0.0 360.274068630718 82.06696497134999 442.341033602068 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 DYYTE 1.1861 - 66 + 1 1.223 43513.4 1.0 9757 4878 14633 HBL1_DMSO_200M_050219_2,14637 HBL1_DMSO_200M_050219_2,14637,EIQKMQILV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14638 77.048 86.0 763140.0 25 0 91923.0 + 36580 TALLKIEGV 9 91 472.2949192706823 942.5752856081646 2 472.2954284548759 MULTI CID FTMS 0 0 0 14633 552769.375 0.0841175405364996 4 -0.364776611328125 5 Unmodified _TALLKIEGV_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000329092.12_1_3:197677808-197679492:+|nuORF;ENST00000478069.1_1_4:95290987-95291311:+|nuORF;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 47.74868867922204 0.0453060283459952 4 [TA]{I|L}{I|L}K{[QN]|[E{I|L}]|[KN]}GV 9 0 + 52.999 0.0 0.0 5.6227 5.6227 76.921 0.0 0.0 0.0 22.54100322985387 1.928571858695136 1.928571858695136 3.424226808222066 0 1.1861818737241734 2.0 0.3054621874040891 0.0 + + [TA]{I|L}{I|L}K{[QN]|[E{I|L}]|[KN]}GV;[TA]{I|L}{I|L}K[{I|L}A]DV;[TA]{I|L}{I|L}[VS]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{I|L}{I|L}K[R{M(Oxidation (M))|F}]{I|L}[PG];{I|L}{I|L}K{I|L}[R{M(Oxidation (M))|F}][PG];[TA]{I|L}[VS]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[K{I|L}][R{M(Oxidation (M))|F}]{I|L}{I|L}[PG];[K{I|L}]{I|L}[R{M(Oxidation (M))|F}]{I|L}[PG];[K{I|L}]{I|L}{I|L}[R{M(Oxidation (M))|F}][PG] 5.6227;5.2595;4.1965;3.809;3.2786;3.1775;3.0255;2.7481;2.2176 +;-;-;-;-;-;-;-;- + 239 + 1 1.223 55740.6 1.0 9758 4878 14633 HBL1_DMSO_200M_050219_2,14638 HBL1_DMSO_200M_050219_2,14638,TALLKIEGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14639 77.05 105.0 596390.0 25 0 49819.0 + 29596 LPFDLQRNV 9 78 550.8030804827365 1099.591608032273 2 551.3055908083916 MULTI CID FTMS 0 0 0 14633 518820.0625 0.6161211947129096 2 -0.2126083374023437 6 Unmodified _QLVEDLDRI_ ENSG00000153487|ENST00000333219|ING1 9.38312468134398 0.5871240394367778 4 P{M(Oxidation (M))|F}D{I|L}QRNV 8 7 28.431 0.0 0.0 2.5856 0.0 0.0 112.07686296881144 0.0 112.07686296881144 0.0 -5.029451270896104 -5.029451270896104 0.0 0 0.0 0.0 0.0 0.3252574989159953 P{M(Oxidation (M))|F}D{I|L}QRNV 2.5856 - 229 + 1 1.223 55806.4 1.0 9759 4878 14633 HBL1_DMSO_200M_050219_2,14639 HBL1_DMSO_200M_050219_2,14639,QLVEDLDRI False False LPFDLQRNV 77.049997 551.305590808392 8766032.0 14633.0 ENSG00000153487|ENST00000333219|ING1 6.772749582926433 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14640 77.052 78.0 306520.0 25 0 21160.0 12773 GVPPRWPLGKG 11 52 582.3352849449232 1162.6560169566462 2 582.3354369997978 MULTI CID FTMS 0 0 0 14633 515439.84375 0.8668317742274543 1 -0.1085281372070312 7 Unmodified _GVPPRWPLGKG_ ENST00000547802.1_1_12:113860481-113860643:+|nuORF 3.2813086475875832 0.8596665074481906 4 V 1 10 10.379 0.0 0.0 0.89266 0.0 0.0 1045.5762649198282 0.0 1045.5762649198282 0.0 6.399203482970215 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.89266 + + 15 + 1 1.223 24466.8 1.0 9760 4878 14633 HBL1_DMSO_200M_050219_2,14640 HBL1_DMSO_200M_050219_2,14640,GVPPRWPLGKG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14641 77.055 158.0 512760.0 25 0 38384.0 -1 0 87 644.656949076963 1930.949017831089 3 644.9926635622978 MULTI CID FTMS 0 0 0 14633 453890.71875 0.9497928530628352 -1 0.0548477172851562 8 4 {[DA]|[EG]}V 3 -1 32.447 0.0 0.0 1.6804 0.0 0.0 0.0 1642.7931394954046 1642.7931394954046 -1.4317594817720902 0.0 -1.4317594817720902 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V 1.6804 - 186 1 1.223 65940.9 1.0 9761 4878 14633 HBL1_DMSO_200M_050219_2,14641 HBL1_DMSO_200M_050219_2,14641, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14642 77.064 497.0 338950.0 25 0 49608.0 -1 PKVVVPMPRSL 11 151 619.8692950800139 1237.7240372268277 2 619.8694335818291 MULTI CID FTMS 0 0 0 14633 374351.71875 0.4945913607929808 6 -0.5578765869140625 9 Oxidation (M) _PKVVVPM(Oxidation (M))PRSL_ ENST00000522987.1_1_8:80915285-80942392:-|nuORF 5.731851221503515 0.8481046878870278 4 YS 2 -1 16.722 0.0 0.0 1.351 0.0 0.0 338.2318019746777 646.3682955377561 984.600097512434 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 YS 1.351 - 153 + 1 1.223 125009.7 1.0 9762 4878 14633 HBL1_DMSO_200M_050219_2,14642 HBL1_DMSO_200M_050219_2,14642,PKVVVPMPRSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14643 77.074 583.0 323310.0 25 0 24998.0 + 16202 IVIQQDDEIRL 11 133 671.372172438947 1340.729791944694 2 671.3726074099541 MULTI CID FTMS 0 0 0 14633 268002.15625 0.2876551710397436 -2 0.1659927368164062 10 Unmodified _IVIQQDDEIRL_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000525455.5_1_11:62530233-62533976:+|nuORF;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 81.9152076656658 0.0062322988290358 4 {I|L}V{I|L}QQDDE{I|L}R{I|L} 11 0 + 126.94 0.0 0.0 9.4683 9.4683 92.623 0.0 0.0 0.0 100.26649382261772 11.188821499629212 11.188821499629212 9.128498242810991 0 1.3494850021680094 1.6989700043360187 1.110924374808178 1.2302046884880935 + + {I|L}V{I|L}QQDDE{I|L}R{I|L};{I|L}V{I|L}Q[AG]DDE{I|L}R{I|L};{I|L}V{I|L}[AG]QDDE{I|L}R{I|L};{I|L}V{I|L}[AG][AG]DDE{I|L}R{I|L};{I|L}V{I|L}QQDVV[WE]{I|L};{I|L}V{I|L}QQDVV{M(Oxidation (M))|F}[PA]{I|L};{I|L}V{I|L}QQDVV{NN|[MP]|[D{I|L}]|[EV]}S{I|L};{I|L}V{I|L}QQDVV{NN|[MP]|[D{I|L}]|[EV]}TV;{I|L}V{I|L}QQDVV[MT]PV;{I|L}V{I|L}QQD[Y{I|L}][PG]PV 9.4683;8.7874;8.7874;8.1088;6.4867;6.2031;6.1588;6.0807;5.9313;5.888 +;-;-;-;-;-;-;-;-;- + 853 + 1 1.223 140605.4 1.0 9763 4878 14633 HBL1_DMSO_200M_050219_2,14643 HBL1_DMSO_200M_050219_2,14643,IVIQQDDEIRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14644 77.085 616.0 270210.0 25 0 16693.0 -1 FPCPYCPEK 9 195 570.7462724044103 1139.4779918756203 2 570.7465698122978 MULTI CID FTMS 0 0 0 14633 260053.984375 0.7962580102045308 1 -0.1085281372070312 11 Carbamidomethyl (C) _FPC(Carbamidomethyl (C))PYCPEK_ ENSG00000124226|ENST00000244061|RNF114;nc|ENSG00000124226|Q9Y508-2|RNF114 21.74664581756881 0.2544899275067181 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PW{[CA]|SS}{M(Oxidation (M))|F} 9 -1 + 40.592 0.0 0.0 3.5623 3.5623 67.172 0.0 0.0 0.0 9.853503052590469 12.554154900019316 9.853503052590469 2.4399652728393946 0 0.3478684916057014 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PW{[CA]|SS}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]APE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[ES]|[DT]|[{I|L}C]}PW{[CA]|SS}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}MYY{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}M[DN]P{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YYET{[CA]|SS}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[ES]|[DT]|[{I|L}C]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]APE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[ES]|[DT]|[{I|L}C]}MYY{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YYC(Carbamidomethyl (C)){M(Oxidation (M))|F}P{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[ES]|[DT]|[{I|L}C]}M[DN]P{M(Oxidation (M))|F} 3.5623;3.3482;3.258;3.1034;3.0585;3.054;3.0438;2.7944;2.7559;2.7542 -;-;-;-;-;-;-;-;-;- 1666 1 1.223 131027.2 1.0 9764 4878 14633 HBL1_DMSO_200M_050219_2,14644 HBL1_DMSO_200M_050219_2,14644,FPCPYCPEK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14645 77.096 630.0 173150.0 25 0 15687.0 30207 QVVSRVRHTV 10 136 590.8484100788709 1179.6822672245416 2 590.8484985232353 MULTI CID FTMS 0 0 0 14633 241871.546875 0.8635772289508692 1 -0.1085281372070312 12 Unmodified _QVVSRVRHTV_ ENST00000546413.1_1_12:100558666-100558768:-|nuORF 6.2057823575117 0.6979311171683138 4 V 1 9 10.596 0.0 0.0 0.8982 0.0 0.0 1062.6027593283486 0.0 1062.6027593283486 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.8982 + + 157 + 1 1.223 83934.6 1.0 9765 4878 14633 HBL1_DMSO_200M_050219_2,14645 HBL1_DMSO_200M_050219_2,14645,QVVSRVRHTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14646 77.107 642.0 224980.0 25 0 32701.0 + + 38781 KVITDIAGVIPAE 13 169 663.8948905101719 1325.7752280871437 2 663.8950073122978 MULTI CID FTMS 0 0 0 14633 205266.921875 0.6605588945601405 -1 0.0548477172851562 13 Unmodified _TVDLRLQPTRK_ ENSG00000163918|ENST00000296273|RFC4;ENST00000479307.5_1_3:186508099-186512490:-|nuORF 3.876331618118854 0.8568591502966533 4 {[TV]|[{I|L}S]}D{I|L}[YQ]G{I|L}V 9 -1 22.897 0.0 0.0 1.7271 0.0 0.0 0.0 334.21789101122494 334.21789101122494 12.716158829639928 0.0 0.0 0.0 0 1.0 0.8538719643217619 0.0 0.0 {[TV]|[{I|L}S]}D{I|L}[YQ]G{I|L}V 1.7271 - 606 1 1.223 117686.9 1.0 9766 4878 14633 HBL1_DMSO_200M_050219_2,14646 HBL1_DMSO_200M_050219_2,14646,TVDLRLQPTRK False False KVITDIAGVIPAE 77.106886 663.895007312298 1510865.375 14633.0 ENSG00000163918|ENST00000296273|RFC4;;ENST00000479307.5_1_3:186508099-186512490:-|nuORF 1.6897877355416615 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14647 77.112 280.0 752390.0 25 0 80261.0 20134 LKPAVVGIKI 10 174 519.3574523450746 1036.7003517569492 2 519.3579589724541 MULTI CID FTMS 0 0 0 14633 194015.84375 0.171196863956043 -3 0.267364501953125 14 Unmodified _LKPAVVGIKI_ ENSG00000153956|ENST00000356860|CACNA2D1;nc|ENSG00000153956|P54289-3|CACNA2D1;nc|ENSG00000153956|P54289-4|CACNA2D1;nc|ENSG00000153956|P54289-5|CACNA2D1;nc|ENSG00000153956|P54289|CACNA2D1 32.78568957990786 0.2337485590374503 4 {I|L}K[QP]V{I|L}VK{I|L} 9 4 + 37.505 0.0 0.0 3.6178 3.6178 65.059 0.0 0.0 0.0 20.83436973805146 2.3064574675891407 2.3064574675891407 1.249387366082999 0 1.2447026752325154 0.5228787452803376 0.0 0.1861818737241735 {I|L}K[QP]V{I|L}VK{I|L};{I|L}K{I|L}[NP]{I|L}VK{I|L};{I|L}K[QP]V{I|L}[K{I|L}]V;{I|L}K{I|L}[NP]{I|L}[K{I|L}]V 3.6178;3.4973;2.2828;2.1623 -;-;-;- 785 + 1 1.223 163029.3 1.0 9767 4878 14633 HBL1_DMSO_200M_050219_2,14647 HBL1_DMSO_200M_050219_2,14647,LKPAVVGIKI False True KIPQVLVKL 77.112044 519.357958972454 23644490.0 14633.0 nc|ENSG00000008838|O75448-2|MED24;;ENSG00000008838|ENST00000394128|MED24 0.6731688976287842 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14648 77.118 258.0 304000.0 25 0 31595.0 + 17993 KRTSDRGRLS 10 122 588.3352689514177 1174.6559849696353 2 588.3363525271416 MULTI CID FTMS 0 0 0 14633 170541.6875 0.2630740322244761 6 -0.5578765869140625 15 Unmodified _KRTSDRGRLS_ REV__ENSG00000112983|ENST00000254900|BRD8;REV__nc|ENSG00000112983|Q9H0E9-2|BRD8;REV__nc|ENSG00000112983|Q9H0E9-3|BRD8;REV__nc|ENSG00000112983|Q9H0E9-4|BRD8 7.608950283845883 0.6914406445242895 4 {I|L} 1 -1 10.837 0.0 0.0 0.92261 0.0 0.0 1043.5610885846727 0.0 1043.5610885846727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.92261 + + 229 + 1 1.223 65190.4 1.0 9768 4878 14633 HBL1_DMSO_200M_050219_2,14648 HBL1_DMSO_200M_050219_2,14648,KRTSDRGRLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14649 77.132 800.0 93331.0 25 0 15608.0 -1 0 55 1163.457987468611 3487.352133006033 3 1163.796313464642 MULTI CID FTMS 0 0 0 14633 162721.65625 0.0013287288859028 52 -5.555015563964844 16 4 E 1 -1 6.9897 0.0 0.0 0.20043 0.0 0.0 2831.123633761493 524.1630953424436 3355.2867291039365 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20043 - 29 + 1 1.223 61517.4 0.8500000238418579 9769 4878 14633 HBL1_DMSO_200M_050219_2,14649 HBL1_DMSO_200M_050219_2,14649, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14650 77.146 800.0 205700.0 25 0 18456.0 -1 0 92 1009.1174065531308 3024.330390259592 3 1009.454150378704 MULTI CID FTMS 0 0 0 14633 148558.296875 0.7240536545943982 -1 0.0548477172851562 17 4 [NP][WD]VH{M(Oxidation (M))|F}NKKQ 11 -1 22.03 0.0 0.0 0.72843 0.0 0.0 0.0 1627.5764476931668 1627.5764476931668 10.615616686032933 0.0 0.0 0.0 0 0.0 0.0 0.75 0.6861818737241735 [NP][WD]VH{M(Oxidation (M))|F}NKKQ 0.72843 - 289 1 1.223 118754.9 0.9399999976158142 9770 4878 14633 HBL1_DMSO_200M_050219_2,14650 HBL1_DMSO_200M_050219_2,14650, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14652 77.15 18.0 2730800.0 25 0 215970.0 25327 NAINEYRI 8 78 496.762976910448 991.511400887696 2 496.7623474001884 MULTI CID FTMS 0 0 0 14651 2628568.5 0.4714499096852138 2 -0.1927108764648437 1 Unmodified _NAINEYRI_ ENSG00000114541|ENST00000398540|FRMD4B;nc|ENSG00000114541|Q9Y2L6-2|FRMD4B 13.50788311687929 0.7113601687236069 4 KG{I|L} 3 7 14.437 0.0 0.0 1.4561 0.0 0.0 675.3000189070303 0.0 675.3000189070303 0.0 3.4678748622465623 0.0 0.0 0 0.0 0.0 0.0 0.0 KG{I|L} 1.4561 - 106 + 1 1.223 42517.7 1.0 9771 4879 14651 HBL1_DMSO_200M_050219_2,14652 HBL1_DMSO_200M_050219_2,14652,NAINEYRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14653 77.152 31.0 1482000.0 25 0 200490.0 + 44791 YARQLEMIV 9 77 561.8035259920644 1121.5924990509286 2 561.8030883669853 MULTI CID FTMS 0 0 0 14651 1038870.375 0.4658698244832807 2 -0.1927108764648437 2 Unmodified _YPMFPQKIV_ ENSG00000099341|ENST00000215071|PSMD8 18.13498045792455 0.3457906370836843 4 EM{I|L}V 4 6 32.423 0.0 0.0 2.8908 0.0 0.0 631.34379775215 0.0 631.34379775215 0.0 13.214562785677655 0.0 0.0 0 0.5 0.0 0.0 0.0 EM{I|L}V 2.8908 - 84 1 1.223 39710.6 1.0 9772 4879 14651 HBL1_DMSO_200M_050219_2,14653 HBL1_DMSO_200M_050219_2,14653,YPMFPQKIV False False YARQLEMIV 77.151617 561.803088366985 34267052.0 14651.0 ENSG00000099341|ENST00000215071|PSMD8 4.886023839314778 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14654 77.153 46.0 2341600.0 25 0 589330.0 + 261 ADAPVALVV 9 109 427.75259281544993 853.4906326976999 2 427.7528259158134 MULTI CID FTMS 0 0 0 14651 3181181.0 0.5897669301773112 2 -0.1927108764648437 3 Unmodified _ADAPVALVV_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 42.09456458481378 0.0639583784996157 4 [VP]AADA{I|L}VV 9 4 + 60.172 0.0 0.0 7.0502 7.0502 80.736 0.0 0.0 0.0 12.130748253088512 10.330145895351848 10.330145895351848 2.6449798674442206 0 0.8182503180159344 1.3010299956639813 0.7887254899964358 0.0 [VP]AADA{I|L}VV;[VP]AAD{I|L}AVV;[VP]ADAA{I|L}VV;[VP]A{I|L}ADAVV;[VP]ADA{I|L}AVV;[VP]AA{I|L}DAVV;[VP]A{I|L}DAAVV;{[DA]|[EG]}PVAA{I|L}VV;{[DA]|[EG]}AVPA{I|L}VV;[VP]EQA{I|L}VV 7.0502;6.7403;6.4127;6.3008;6.1028;5.9481;5.6397;5.6289;5.6145;5.4237 -;-;-;-;-;-;-;-;-;- 775 1 1.223 85386.0 1.0 9773 4879 14651 HBL1_DMSO_200M_050219_2,14654 HBL1_DMSO_200M_050219_2,14654,ADAPVALVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14655 77.154 22.0 2632500.0 25 0 224470.0 + 28856 QAIERYLVV 9 91 545.8164761257839 1089.6183993183677 2 545.8168823122978 MULTI CID FTMS 0 0 0 14651 1754303.75 0.5139307813500622 -1 0.1085281372070312 4 Unmodified _QAIERYLVV_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000470302.5_1_2:230656574-230657731:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 69.10491478415734 0.0214449631113747 4 QA{I|L}YVW{I|L}VV 9 3 + 57.608 0.0 0.0 5.287 5.287 71.331 0.0 0.0 0.0 12.21848749616356 13.750612633917 12.21848749616356 1.249387366082999 0 0.809894379144197 1.2218487496163564 0.0 0.0 QA{I|L}YVW{I|L}VV;QAY{I|L}VW{I|L}VV;QA{I|L}YV[RD]{I|L}{I|L};QAY{I|L}V[RD]{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KC]VW{I|L}VV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KC]V[RD]{I|L}{I|L} 5.287;5.1723;4.025;3.9103;1.6933;0.50041 -;-;-;-;-;- 161 + 1 1.223 53477.9 1.0 9774 4879 14651 HBL1_DMSO_200M_050219_2,14655 HBL1_DMSO_200M_050219_2,14655,QAIERYLVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14656 77.156 111.0 716190.0 25 0 153080.0 + 40196 VGPYFNKLKR 10 81 611.3562878849376 1220.6980228366751 2 611.3566772341728 MULTI CID FTMS 0 0 0 14651 758858.8125 0.2950513855269032 7 -0.6875686645507812 5 Unmodified _VGPYFNKLKR_ REV__ENSG00000124721|ENST00000327475|DNAH8;REV__nc|ENSG00000124721|Q96JB1-2|DNAH8;REV__nc|ENSG00000124721|Q96JB1|DNAH8 1.844237919475145 0.7181058121064529 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.223 64851.0 1.0 9775 4879 14651 HBL1_DMSO_200M_050219_2,14656 HBL1_DMSO_200M_050219_2,14656,VGPYFNKLKR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14657 77.161 229.0 621420.0 25 0 60891.0 + 3955 DALLKFSHI 9 137 348.5342444955327 1042.580904086798 3 348.5341979861259 MULTI CID FTMS 0 0 0 14651 741035.125 0.9120692598227226 -1 0.1085281372070312 6 Unmodified _DALLKFSHI_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 49.93300154707207 0.0405168250806675 4 {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L} 9 0 + 76.697 0.0 0.0 7.3565 7.3565 88.138 0.0 0.0 0.0 19.62189282359297 7.596678446896306 7.596678446896306 7.596678446896306 0 0.3494850021680094 1.6989700043360187 0.7134679910804405 0.3494850021680094 + + {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L};{[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}S{I|L}H;{[DA]|[EG]}{I|L}{I|L}{I|L}[RP][{M(Oxidation (M))|F}V];{[DA]|[EG]}[KP]H{I|L}{I|L}H{I|L};{[DA]|[EG]}[KP]H{I|L}{I|L}{I|L}H;[PS]{I|L}NH{I|L}{I|L}H{I|L};[PS]{I|L}NH{I|L}{I|L}{I|L}H;[PS]{I|L}GGH{I|L}{I|L}H{I|L} 7.3565;6.6279;3.5394;2.2824;1.5537;1.2498;0.5212;0.36663 +;-;-;-;-;-;-;- + 285 + 1 1.223 118619.0 1.0 9776 4879 14651 HBL1_DMSO_200M_050219_2,14657 HBL1_DMSO_200M_050219_2,14657,DALLKFSHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14658 77.163 102.0 1055500.0 25 0 103260.0 + -1 VEGAGMSLL 9 103 446.7260462964681 891.4375396597362 2 446.7264892458916 MULTI CID FTMS 0 0 0 14651 615524.875 0.6373712114656945 2 -0.1927108764648437 7 Oxidation (M) _VEGAGM(Oxidation (M))SLL_ REV__ENSG00000140157|ENST00000337451|NIPA2 11.640296217721598 0.521594087909532 4 [{I|L}P]NPNAVD 8 -1 35.839 0.0 0.0 4.0204 0.0 0.0 0.0 68.01272717043028 68.01272717043028 14.87002527416834 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}P]NPNAVD 4.0204 - 758 1 1.223 88610.2 1.0 9777 4879 14651 HBL1_DMSO_200M_050219_2,14658 HBL1_DMSO_200M_050219_2,14658,VEGAGMSLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14659 77.166 163.0 474010.0 25 0 41979.0 + 25119 MQAERIFSEV 10 99 605.3012357035514 1208.5879184739026 2 605.3005248904228 MULTI CID FTMS 0 0 0 14651 584175.6875 1.0 0 0.0 8 Unmodified _MQAERIFSEV_ ENSG00000004897|ENST00000066544|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 77.04852534044906 0.0187095815199658 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[TP]S{I|L}{M(Oxidation (M))|F}SEV 11 3 + 76.151 0.0 0.0 6.3008 6.3008 79.547 0.0 0.0 0.0 18.30971062290122 34.70432605307022 18.30971062290122 3.393270011618597 0 1.5994850021680094 0.744727494896694 0.3252574989159953 0.3494850021680094 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[TP]S{I|L}{M(Oxidation (M))|F}SEV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AER{I|L}{M(Oxidation (M))|F}SEV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[TP]S{I|L}{M(Oxidation (M))|F}SPM;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AER{I|L}{M(Oxidation (M))|F}SPM;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[TP]S{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AER{I|L}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[TP]S{I|L}{M(Oxidation (M))|F}[{I|L}A]M;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AER{I|L}{M(Oxidation (M))|F}[{I|L}A]M;{NN|[MP]|[D{I|L}]|[EV]}{[WN]|[YH]}S{I|L}{M(Oxidation (M))|F}SEV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[TP]S{I|L}W[Y{I|L}] 6.3008;6.02;5.7826;5.5018;4.6491;4.3684;4.2333;3.9525;3.7749;3.5748 -;+;-;-;-;-;-;-;-;- + 689 1 1.223 59027.7 1.0 9778 4879 14651 HBL1_DMSO_200M_050219_2,14659 HBL1_DMSO_200M_050219_2,14659,MQAERIFSEV True True MQAERIFSEV 77.166092 605.300524890423 4282281.0 14651.0 ENSG00000004897|ENST00000066544|CDC27;;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;;nc|ENSG00000004897|P30260-2|CDC27 7.643405437469482 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14660 77.17 177.0 659700.0 25 0 80316.0 21614 LPKSLPLV 8 115 433.7890031493275 865.5634533654551 2 433.7893859744072 MULTI CID FTMS 0 0 0 14651 486851.03125 1.0 0 0.0 9 Unmodified _LPKSLPLV_ ENSG00000137103|ENST00000643932|TMEM8B;ENST00000490199.2_1_9:35829798-35841141:+|nuORF 26.88365393820708 0.4786498634179528 4 VPP 3 6 47.435 0.0 0.0 5.4802 0.0 0.0 0.0 569.3670137994749 569.3670137994749 8.872184226116673 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VPP 5.4802 - 301 + 1 1.223 97078.4 1.0 9779 4879 14651 HBL1_DMSO_200M_050219_2,14660 HBL1_DMSO_200M_050219_2,14660,LPKSLPLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14661 77.174 229.0 730840.0 25 0 144410.0 + 3811 DAIPGLKI 8 108 413.7553911210447 825.4962293088894 2 413.7552673220634 MULTI CID FTMS 0 0 0 14651 438607.96875 0.7519030271004173 -1 0.1085281372070312 10 Unmodified _DAIPGLKI_ ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15 50.855029805455786 0.1352255786796883 4 {[DA]|[EG]}{I|L}PG{I|L}K{I|L} 8 0 + 47.433 0.0 0.0 5.746 5.746 77.841 0.0 0.0 0.0 13.360243145627209 3.61727836017593 3.61727836017593 3.61727836017593 0 0.805462187404089 1.5228787452803376 0.0 0.5044321917401079 + + {[DA]|[EG]}{I|L}PG{I|L}K{I|L};{[DA]|[EG]}{I|L}PG{I|L}{I|L}K;{[DA]|[EG]}{I|L}{I|L}[PG]K{I|L};{[DA]|[EG]}{I|L}{I|L}[PG]{I|L}K 5.746;5.3078;5.0831;4.6449 +;-;-;- + 77 + 1 1.223 134771.4 1.0 9780 4879 14651 HBL1_DMSO_200M_050219_2,14661 HBL1_DMSO_200M_050219_2,14661,DAIPGLKI False True DAIPGLKI 77.173829 413.755267322063 5331425.0 14651.0 nc|ENSG00000121749|Q8TC07|TBC1D15;;ENSG00000121749|ENST00000485960|TBC1D15;;nc|ENSG00000121749|Q8TC07-3|TBC1D15 4.202370802561442 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14662 77.177 149.0 586940.0 25 0 55703.0 + 21755 LPMHPLQI 8 113 474.7704197525736 947.5262865719473 2 474.7714111208916 MULTI CID FTMS 0 0 0 14651 355084.6875 0.2992255277937917 2 -0.1927108764648437 11 Unmodified _LPMHPLQI_ ENSG00000134744|ENST00000257177|TUT4;ENST00000466440.1_1_1:52890958-52897138:-|nuORF;nc|ENSG00000134744|Q5TAX3|TUT4 45.7499826716795 0.1592378023510922 4 VQ{I|L}{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 7 7 27.211 0.0 0.0 2.8718 0.0 0.0 69.05863387275546 0.0 69.05863387275546 0.0 1.2414649103596709 0.0 0.0 0 0.0 0.0 0.0 0.0 VQ{I|L}{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 2.8718 - 488 1 1.223 73460.4 1.0 9781 4879 14651 HBL1_DMSO_200M_050219_2,14662 HBL1_DMSO_200M_050219_2,14662,LPMHPLQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14663 77.181 235.0 449160.0 25 0 101940.0 -1 0 73 629.3826978253124 628.3754213587124 1 629.3831664919853 MULTI CID FTMS 0 0 0 14651 305896.71875 0.4941606055349731 2 -0.1927108764648437 12 4 P 1 -1 11.783 0.0 0.0 1.8751 0.0 0.0 513.311675791621 0.0 513.311675791621 0.0 1.2981865525287797 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.8751 - 30 + 1 1.223 83089.5 1.0 9782 4879 14651 HBL1_DMSO_200M_050219_2,14663 HBL1_DMSO_200M_050219_2,14663, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14664 77.186 250.0 496920.0 25 0 39424.0 + 4078 DAMRLYYV 8 153 515.7543466344052 1029.4941403356104 2 515.7560912966728 MULTI CID FTMS 0 0 0 14651 307506.75 0.0812443534762506 4 -0.3897018432617187 13 Unmodified _DAMRLYYV_ ENSG00000105258|ENST00000221859|POLR2I;ENST00000586439.1_1_19:36604659-36605969:-|nuORF;ENST00000589591.5_1_19:36604659-36605638:-|nuORF;ENST00000592962.5_1_19:36604659-36605276:-|nuORF 18.373094154950223 0.6394861461465958 4 [VG]A[MD]{I|L}YYV 9 3 + 37.844 0.0 0.0 3.676 3.676 63.505 0.0 0.0 0.0 0.3816456785509174 14.09256854528806 0.3816456785509174 0.3816456785509174 0 0.805462187404089 1.5228787452803376 0.0 0.0 [VG]A[MD]{I|L}YYV;{[DA]|[EG]}{[WT]|[RM]}{I|L}YYV;{[QV]|[N{I|L}]|[RA]|[KV]}[MD]{I|L}YYV;[VG][WM]{I|L}YYV;{[VA]|[{I|L}G]}G[MD]{I|L}YYV;{[QN]|[E{I|L}]|[KN]}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}YYV;[VG]A{[QC]|[C(Carbamidomethyl (C))A]}KYYV;[VP]{M(Oxidation (M))|F}DKYYV;{[QV]|[N{I|L}]|[RA]|[KV]}{[QC]|[C(Carbamidomethyl (C))A]}KYYV;{[QG]|[NA]}[C(Carbamidomethyl (C))K]{I|L}YYV 3.676;3.6389;3.6315;3.5101;3.3871;3.3207;3.2125;3.2077;3.1681;3.0245 -;+;-;-;-;-;-;-;-;- + 1609 1 1.223 98020.5 1.0 9783 4879 14651 HBL1_DMSO_200M_050219_2,14664 HBL1_DMSO_200M_050219_2,14664,DAMRLYYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14665 77.198 668.0 451150.0 25 0 28847.0 42753 VVFLRIDATGP 11 200 594.3425712038348 1186.6705894744696 2 594.3431884646416 MULTI CID FTMS 0 0 0 14651 239016.75 0.1051583715981423 -4 0.3758926391601562 14 Unmodified _VVFLRIDATGP_ nc|ENSG00000146828|Q9BXP2-2|SLC12A9 26.268140514670165 0.4754186812857754 4 VV{M(Oxidation (M))|F}P[R{I|L}]N{M(Oxidation (M))|F}E 9 6 56.073 0.0 0.0 4.7253 0.0 0.0 0.0 82.06693445377186 82.06693445377186 25.707650024558014 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.6964215256439 0.3054621874040891 VV{M(Oxidation (M))|F}P[R{I|L}]N{M(Oxidation (M))|F}E 4.7253 - 2435 + 1 1.223 219516.2 1.0 9784 4879 14651 HBL1_DMSO_200M_050219_2,14665 HBL1_DMSO_200M_050219_2,14665,VVFLRIDATGP False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 14666 77.203 283.0 440190.0 25 0 36204.0 + 19721 LGPARFVPT 9 164 479.2779156942874 956.5412784553748 2 479.2778503298759 MULTI CID FTMS 0 0 0 14651 229587.65625 0.5815462797504201 -1 0.1085281372070312 15 Unmodified _LGPARFVPT_ REV__ENSG00000004399|ENST00000324093|PLXND1;REV__nc|ENSG00000004399|Q9Y4D7-2|PLXND1 12.531546534597751 0.4974689918368763 4 [{I|L}A]M 3 -1 18.389 0.0 0.0 1.9225 0.0 0.0 0.0 638.3597653540654 638.3597653540654 6.969416637787969 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.0 [{I|L}A]M 1.9225 - 274 1 1.223 97051.8 1.0 9785 4879 14651 HBL1_DMSO_200M_050219_2,14666 HBL1_DMSO_200M_050219_2,14666,LGPARFVPT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14667 77.206 154.0 346410.0 25 0 42193.0 -1 QALTEKMVL 9 98 524.7867035229187 1047.5588541126374 2 524.7870361208916 MULTI CID FTMS 0 0 0 14651 216566.28125 0.3071465686698596 3 -0.2562484741210937 16 Oxidation (M) _QALTEKM(Oxidation (M))VL_ ENSG00000134588|ENST00000511190|USP26 21.74664581756881 0.2544899275067181 4 [VP]AADA 6 -1 23.628 0.0 0.0 2.2555 0.0 0.0 0.0 520.2735507281249 520.2735507281249 2.9265805661206734 0.0 0.0 0.0 0 0.3494850021680094 0.6777807052660807 0.2887254899964357 0.0 [VP]AADA 2.2555 - 358 1 1.223 50037.7 1.0 9786 4879 14651 HBL1_DMSO_200M_050219_2,14667 HBL1_DMSO_200M_050219_2,14667,QALTEKMVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14668 77.219 705.0 240810.0 25 0 10484.0 + 45717 YYFDRDDVAL 10 162 638.7953002051315 1275.576047477063 2 638.7961303591728 MULTI CID FTMS 0 0 0 14651 194878.78125 0.2270062360708385 2 -0.1927108764648437 17 Unmodified _YYFDRDDVAL_ ENSG00000167996|ENST00000273550|FTH1;ENST00000533138.1_1_11:61732822-61734897:-|nuORF;ENST00000534719.1_1_11:61732389-61734897:-|nuORF 30.7034409873982 0.2788461460996952 4 [VP]AADA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YY{I|L} 11 9 + 56.921 0.0 0.0 4.4624 4.4624 65.859 0.0 0.0 0.0 12.025877937524896 7.38563290272706 7.38563290272706 0.1844655354022961 0 0.3807196863200844 1.3979400086720375 0.6237125054200234 0.0 [VP]AADA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YY{I|L};[VP]AAD{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YYA{I|L};[VP]AAD{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AYY{I|L};[VP]ADAA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YY{I|L};[VP]ADA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YYA{I|L};[VP]AGEA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YY{I|L};[VP]AGE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YYA{I|L};[VP]AEGA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YY{I|L};[VP]AEG{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YYA{I|L};[VP]ADA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AYY{I|L} 4.4624;4.4479;4.1494;4.1284;4.114;4.0883;4.0738;3.9904;3.9759;3.8155 -;-;-;-;-;-;-;-;-;- 6005 1 1.223 126403.2 1.0 9787 4879 14651 HBL1_DMSO_200M_050219_2,14668 HBL1_DMSO_200M_050219_2,14668,YYFDRDDVAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14669 77.233 776.0 184350.0 25 0 11069.0 + + 23915 IVVGASDGIIRV 12 178 599.8622025434895 1197.709852153779 2 599.8625366091728 MULTI CID FTMS 0 0 0 14651 167219.65625 0.5002295939496385 2 -0.1927108764648437 18 Unmodified _LVNKDELRIV_ ENSG00000137055|ENST00000397292|PLAA 32.78568957990786 0.2337485590374503 4 [{I|L}V]VGA[RD]T[RV]{I|L} 11 -1 + 51.419 0.0 0.0 4.2931 4.2931 67.137 0.0 0.0 0.0 12.587453481056444 2.384932410221729 2.384932410221729 1.1696980693702486 0 0.7302046884880937 2.0 0.3807196863200844 0.6109243748081782 [{I|L}V]VGA[RD]T[RV]{I|L};[{I|L}V]VGAS[PS]T[RV]{I|L};[{I|L}V]VGA[RD]T[R{I|L}]V;[{I|L}V]VGAS[PS]T[R{I|L}]V;[{I|L}V]VGASDAV[RV]{I|L};[{I|L}V]VGASKE[{I|L}P]SV;[{I|L}V]RA[RD]T[RV]{I|L};[{I|L}V]VGASDAV[R{I|L}]V;[{I|L}V]RAS[PS]T[RV]{I|L};[{I|L}V]VGASKE[VP]S{I|L} 4.2931;4.1954;4.08;3.9823;3.9404;3.7459;3.7441;3.7273;3.6434;3.5562 -;-;-;-;-;-;-;-;-;- 6816 + 1 1.223 104470.7 1.0 9788 4879 14651 HBL1_DMSO_200M_050219_2,14669 HBL1_DMSO_200M_050219_2,14669,LVNKDELRIV False False IVVGASDGIIRV 77.232627 599.3615 2217587.0 14651.0 ENSG00000137055|ENST00000397292|PLAA 4.742090543111165 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14670 77.236 193.0 647670.0 25 0 117170.0 -1 0 108 366.7199368968371 731.4253208604742 2 366.7198364138603 MULTI CID FTMS 0 0 0 14651 147144.328125 0.1812765497917595 -2 0.1633758544921875 19 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KM 6 -1 + 56.757 0.0 0.0 7.7598 7.7598 85.283 0.0 0.0 0.0 26.338804172855603 4.101744650890495 4.101744650890495 4.101744650890495 0 0.6549471895720985 2.0 0.0 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KM;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}MK;{NN|[MP]|[D{I|L}]|[EV]}{I|L}M{I|L}K 7.7598;7.199;5.5989 -;-;- 66 + 1 1.223 104170.2 1.0 9789 4879 14651 HBL1_DMSO_200M_050219_2,14670 HBL1_DMSO_200M_050219_2,14670, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14671 77.25 800.0 221880.0 25 0 45197.0 20718 LLSALQVEEIL 11 148 614.365755700682 1226.716958468164 2 614.3658325076103 MULTI CID FTMS 0 0 0 14651 122120.84375 1.0 0 0.0 20 Unmodified _LLSALQVEEIL_ ENSG00000117408|ENST00000372343|IPO13 19.256988751693697 0.6345794173041263 4 [VG]V{I|L}{[{M(Oxidation (M))|F}D]|MM}V{I|L}{I|L}AD 11 10 34.335 0.0 0.0 2.799 0.0 0.0 0.0 82.06695734195546 82.06695734195546 11.403533132555792 0.0 0.0 0.0 0 0.4896518287104437 1.6989700043360187 1.0044321917401078 0.0 [VG]V{I|L}{[{M(Oxidation (M))|F}D]|MM}V{I|L}{I|L}AD 2.799 - 1181 + 1 1.223 131625.0 0.949999988079071 9790 4879 14651 HBL1_DMSO_200M_050219_2,14671 HBL1_DMSO_200M_050219_2,14671,LLSALQVEEIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14673 77.261 419.0 308250.0 25 0 63199.0 -1 0 76 1097.797093537018 3290.3694512112543 3 1098.132983386517 MULTI CID FTMS 0 0 0 14672 553568.3125 0.8899947135451914 1 -0.0886306762695312 1 4 Y[YC(Carbamidomethyl (C))]T{I|L}TVN 8 -1 26.477 0.0 0.0 0.80469 0.0 0.0 1781.6353946700417 491.2629220205778 2272.89831669062 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 1.2614393726401687 Y[YC(Carbamidomethyl (C))]T{I|L}TVN 0.80469 - 145 + 1 1.226 112820.0 1.0 9791 4880 14672 HBL1_DMSO_200M_050219_2,14673 HBL1_DMSO_200M_050219_2,14673, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14674 77.262 23.0 1819000.0 25 0 314470.0 + 18174 KTTPDVIFV 9 67 510.2929199854706 1018.5712870377412 2 510.2930786013603 MULTI CID FTMS 0 0 0 14672 1368575.25 1.0 0 0.0 2 Unmodified _KTTPDVIFV_ ENSG00000138326|ENST00000372360|RPS24;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;ENST00000478655.5_1_10:79793659-79797065:+|nuORF;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;nc|ENSG00000138326|P62847-3|RPS24;nc|ENSG00000138326|P62847-4|RPS24;nc|ENSG00000138326|P62847|RPS24 19.256988751693697 0.3154191944385105 4 V{I|L}{M(Oxidation (M))|F}V 4 5 21.555 0.0 0.0 2.1162 0.0 0.0 542.2720814435562 0.0 542.2720814435562 0.0 6.9504625720438895 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + V{I|L}{M(Oxidation (M))|F}V 2.1162 + + 28 1 1.226 37499.5 1.0 9792 4880 14672 HBL1_DMSO_200M_050219_2,14674 HBL1_DMSO_200M_050219_2,14674,KTTPDVIFV False True KTTPDVIFV 77.261806 510.29307860136 23657670.0 14672.0 ENST00000478655.5_1_10:79793659-79797065:+|nuORF;;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;;ENSG00000138326|ENST00000372360|RPS24;;nc|ENSG00000138326|P62847|RPS24;;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;;nc|ENSG00000138326|P62847-4|RPS24;;nc|ENSG00000138326|P62847-3|RPS24 3.975735823313395 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14675 77.264 74.0 485590.0 25 0 85744.0 + 18433 KWYRLKRCL 9 48 633.3691586956885 1264.723764458177 2 633.3690063357353 MULTI CID FTMS 0 0 0 14672 498577.65625 0.247815503005755 -7 0.6622161865234375 3 Unmodified _KWYRLKRCL_ REV__ENST00000596769.1_1_19:53510963-53514048:+|nuORF 0.6014990680409731 0.8936861360942873 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 1.226 34587.6 1.0 9793 4880 14672 HBL1_DMSO_200M_050219_2,14675 HBL1_DMSO_200M_050219_2,14675,KWYRLKRCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14676 77.265 58.0 485080.0 25 0 65307.0 + 12839 GVVDKSLFSNV 11 67 582.8161458508561 1163.617738768512 2 582.8158447146416 MULTI CID FTMS 0 0 0 14672 447972.03125 1.0 0 0.0 4 Unmodified _GVVDKSLFSNV_ ENSG00000138363|ENST00000236959|ATIC;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;ENST00000446622.5_1_2:216199652-216212358:+|nuORF;ENST00000467388.1_1_2:216203501-216211697:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC 14.40537977576856 0.7354982482299568 4 NV 2 9 12.912 0.0 0.0 1.1096 0.0 0.0 932.4954070808152 0.0 932.4954070808152 0.0 6.000810826410276 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + NV 1.1096 + + 8 + 1 1.226 29093.9 1.0 9794 4880 14672 HBL1_DMSO_200M_050219_2,14676 HBL1_DMSO_200M_050219_2,14676,GVVDKSLFSNV False True GVVDKSLFSNV 77.265014 582.815844714642 7023370.5 14672.0 ENST00000446622.5_1_2:216199652-216212358:+|nuORF;;nc|ENSG00000138363|P31939-2|ATIC;;ENST00000467388.1_1_2:216203501-216211697:+|nuORF;;ENSG00000138363|ENST00000236959|ATIC;;ENST00000443953.5_1_2:216177073-216214375:+|nuORF 4.929002602895101 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14677 77.27 251.0 696240.0 25 0 73319.0 + 21975 LPPNVQII 8 136 447.2760921142962 892.5376312953924 2 447.2762023806572 MULTI CID FTMS 0 0 0 14672 333957.84375 1.0 0 0.0 5 Unmodified _LPPNVQII_ ENSG00000100099|ENST00000398145|HPS4;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000496385.5_1_22:26849136-26861668:-|nuORF;nc|ENSG00000100099|Q9NQG7-2|HPS4;nc|ENSG00000100099|Q9NQG7-3|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4 42.96799951952854 0.1846367511955703 4 [{I|L}P][NP]VQ{I|L}{I|L} 8 0 + 30.613 0.0 0.0 3.4299 3.4299 68.669 0.0 0.0 0.0 8.450980400142562 3.851971076465474 3.851971076465474 3.3226467981605623 0 0.8182503180159344 1.2218487496163564 0.0 0.6109243748081782 + + [{I|L}P][NP]VQ{I|L}{I|L};[{I|L}P][NP]N{I|L}{I|L}{I|L};[NP]P{I|L}VQ{I|L}{I|L};[{I|L}P][NP]V[AG]{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}Q{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}Q{I|L}{I|L}{I|L};[NP]PV{I|L}Q{I|L}{I|L};[NP]P{I|L}N{I|L}{I|L}{I|L};[{I|L}P][NP]GG{I|L}{I|L}{I|L};[VP]NP{I|L}Q{I|L}{I|L} 3.4299;3.0576;2.483;2.3921;2.3182;2.2882;2.1458;2.1108;2.0199;1.9258 +;-;-;-;-;-;-;-;-;- + 662 1 1.226 135738.2 1.0 9795 4880 14672 HBL1_DMSO_200M_050219_2,14677 HBL1_DMSO_200M_050219_2,14677,LPPNVQII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14678 77.274 238.0 313130.0 25 0 34002.0 + 16902 KIIEELQDLGP 11 107 627.850503982389 1253.686455031578 2 627.8510009646416 MULTI CID FTMS 0 0 0 14672 197676.21875 1.0 0 0.0 6 Unmodified _KIIEELQDLGP_ ENSG00000135506|ENST00000315970|OS9;ENST00000549307.5_1_12:58109828-58113249:+|nuORF;ENST00000550699.5_1_12:58109828-58111744:+|nuORF;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-4|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-8|OS9 42.83518252547288 0.1687213420692654 4 {NN|[MP]|[D{I|L}]|[EV]}QKK{I|L}QD{I|L}GP 11 4 + 66.795 0.0 0.0 5.3279 5.3279 79.132 0.0 0.0 0.0 4.612844208629497 54.31041806263653 4.612844208629497 6.055708793401159 0 1.6549471895720984 0.8538719643217619 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}QKK{I|L}QD{I|L}GP;[AG]D{I|L}KK{I|L}QD{I|L}GP;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KK{I|L}QD{I|L}GP;[AG]{I|L}DKK{I|L}QD{I|L}GP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}H{I|L}K{I|L}QD{I|L}GP;{NN|[MP]|[D{I|L}]|[EV]}QKK{I|L}[AG]D{I|L}GP;{NN|[MP]|[D{I|L}]|[EV]}[AG]KK{I|L}QD{I|L}GP;[{M(Oxidation (M))|F}V][HT]K{I|L}QD{I|L}GP;[Q{I|L}]DKK{I|L}QD{I|L}GP;[TA]{I|L}DQ{I|L}KK[PS]GP 5.3279;4.8448;4.7498;4.6245;4.606;4.5997;4.5997;4.429;4.3857;4.2402 -;-;-;-;-;-;-;-;-;- 737 1 1.226 61849.9 1.0 9796 4880 14672 HBL1_DMSO_200M_050219_2,14678 HBL1_DMSO_200M_050219_2,14678,KIIEELQDLGP False True KIIEELQDLGP 77.27415 627.851000964642 1702615.0 14672.0 nc|ENSG00000135506|Q13438-4|OS9;;nc|ENSG00000135506|Q13438-3|OS9;;nc|ENSG00000135506|Q13438-7|OS9;;nc|ENSG00000135506|Q13438-5|OS9;;nc|ENSG00000135506|Q13438-6|OS9;;ENST00000550699.5_1_12:58109828-58111744:+|nuORF;;nc|ENSG00000135506|Q13438-2|OS9;;ENST00000549307.5_1_12:58109828-58113249:+|nuORF;;nc|ENSG00000135506|Q13438-8|OS9;;ENSG00000135506|ENST00000315970|OS9 5.0412917137146 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14679 77.288 800.0 329420.0 25 0 27793.0 + 41544 VPPAKILIV 9 202 475.3257254923025 948.6368980514052 2 475.3264343142509 MULTI CID FTMS 0 0 0 14672 194192.828125 0.6494837091086807 1 -0.0886306762695312 7 Unmodified _VPPAKILIV_ ENSG00000112992|ENST00000344920|NNT 34.10243960390752 0.1078313939113124 4 VT{I|L}{I|L}{I|L}{I|L}QV 8 5 50.368 0.0 0.0 5.3095 0.0 0.0 0.0 66.03573023013905 66.03573023013905 15.541538744756735 0.0 0.0 0.0 0 0.0682503180159344 1.154901959985743 0.0 0.0 VT{I|L}{I|L}{I|L}{I|L}QV 5.3095 - 771 + 1 1.226 199822.7 0.9100000262260436 9797 4880 14672 HBL1_DMSO_200M_050219_2,14679 HBL1_DMSO_200M_050219_2,14679,VPPAKILIV True True VPPAKILIV 77.287964 475.326434314251 4056096.5 14672.0 ENSG00000112992|ENST00000344920|NNT 1.7826316356658936 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14680 77.293 265.0 289270.0 25 0 14264.0 + 25088 MPWEQIRDV 9 124 587.2893063819488 1172.5640598306975 2 587.7925903201103 MULTI CID FTMS 0 0 0 14672 186540.28125 1.0 0 0.0 8 Unmodified _MPWEQIRDV_ ENSG00000174231|ENST00000304992|PRPF8 22.736283301280096 0.2418982879461534 4 {NN|[MP]|[D{I|L}]|[EV]}WE 4 5 25.131 0.0 0.0 2.1432 0.0 0.0 0.0 626.3273350813056 626.3273350813056 3.7038483876141193 0.0 0.0 0.0 0 0.4247425010840047 0.7695510786217261 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}WE 2.1432 + + 245 + 1 1.226 64199.0 1.0 9798 4880 14672 HBL1_DMSO_200M_050219_2,14680 HBL1_DMSO_200M_050219_2,14680,MPWEQIRDV False True MPWEQIRDV 77.292879 587.79259032011 2366847.5 14672.0 ENSG00000174231|ENST00000304992|PRPF8 5.359754880269368 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14681 77.302 521.0 218760.0 25 0 20511.0 18641 LAGPHLVPV 9 125 451.7765197558311 0 451.7762939333916 PEAK CID FTMS 0 0 0 14672 161215.03125 1.0 0 0.0 9 Unmodified _LAGPHLVPV_ ENSG00000198753|ENST00000361971|PLXNB3;nc|ENSG00000198753|Q9ULL4-2|PLXNB3 20.871210003555333 0.1931737080476581 4 {I|L} 1 8 10.797 0.0 0.0 1.1976 0.0 0.0 313.19996246802947 472.2313439570284 785.4313064250579 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {I|L} 1.1976 + + 72 + 1 1.226 95177.4 1.0 9799 4880 14672 HBL1_DMSO_200M_050219_2,14681 HBL1_DMSO_200M_050219_2,14681,LAGPHLVPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14682 77.315 744.0 183400.0 25 0 26526.0 + 19102 LDSPLLGLWRI 11 176 641.8822995054525 1281.7500460777048 2 641.8841430544853 MULTI CID FTMS 0 0 0 14672 146874.640625 0.2015415867931104 -7 0.6622161865234375 10 Unmodified _LDSPLLGLWRI_ REV__ENSG00000054796|ENST00000371263|SPO11;REV__nc|ENSG00000054796|Q9Y5K1-2|SPO11 5.731851221503515 0.8481046878870278 4 {NN|[MP]|[D{I|L}]|[EV]}SV{I|L}N 6 -1 18.015 0.0 0.0 1.4055 0.0 0.0 0.0 637.3784389822548 637.3784389822548 8.618094056952092 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.7134679910804405 0.0 {NN|[MP]|[D{I|L}]|[EV]}SV{I|L}N 1.4055 - 309 1 1.226 105284.2 1.0 9800 4880 14672 HBL1_DMSO_200M_050219_2,14682 HBL1_DMSO_200M_050219_2,14682,LDSPLLGLWRI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14683 77.325 493.0 249620.0 25 0 21000.0 28622 PVGEASWY 8 138 454.7110736207442 907.4075943082884 2 454.7111999392509 MULTI CID FTMS 0 0 0 14672 121798.515625 0.3345510771283707 3 -0.2856216430664062 11 Unmodified _PVGEASWY_ ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN 14.581692164780916 0.6954967302934248 4 WA[MN]E{I|L} 6 8 22.087 0.0 0.0 2.4341 0.0 0.0 145.07108220862457 0.0 145.07108220862457 0.0 8.843567942833495 0.0 0.0 0 0.25 0.0 0.8494850021680094 0.0 WA[MN]E{I|L} 2.4341 - 408 + 1 1.226 96210.5 1.0 9801 4880 14672 HBL1_DMSO_200M_050219_2,14683 HBL1_DMSO_200M_050219_2,14683,PVGEASWY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14684 77.339 800.0 131940.0 25 0 7355.8 -1 0 119 994.4479022310828 1986.881251528965 2 994.9484741091728 MULTI CID FTMS 0 0 0 14672 106189.2578125 0.2644402162552866 -6 0.5819320678710938 12 4 [NP]N{I|L}{I|L}VP{M(Oxidation (M))|F}V 9 -1 36.163 0.0 0.0 1.8201 0.0 0.0 0.0 990.3482674803904 990.3482674803904 -1.1092437480817807 0.0 -1.1092437480817807 0.0 0 0.3182503180159344 0.958607314841775 0.0 0.7742275032520141 [NP]N{I|L}{I|L}VP{M(Oxidation (M))|F}V 1.8201 - 2447 1 1.226 77248.7 0.6800000071525574 9802 4880 14672 HBL1_DMSO_200M_050219_2,14684 HBL1_DMSO_200M_050219_2,14684, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14686 77.343 5.8 9836900.0 25 0 1078200.0 + 3954 DALLKFSHI 9 81 522.2974255226185 1042.5802981120369 2 522.2983276247978 MULTI CID FTMS 0 0 0 14685 8178793.5 0.5509136479150568 1 -0.06353759765625 1 Unmodified _DALLKFSHI_ ENSG00000139644|ENST00000267115|TMBIM6;nc|ENSG00000139644|P55061-2|TMBIM6 74.19965305603844 0.0194755241623067 4 {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L} 9 0 + 93.91 0.0 0.0 9.0074 9.0074 88.468 0.0 0.0 0.0 62.26203644159419 11.706962271689749 11.706962271689749 5.013184371901133 0 2.555462187404089 1.5228787452803376 0.805462187404089 0.0 + + {[DA]|[EG]}{I|L}{I|L}K{M(Oxidation (M))|F}SH{I|L};{I|L}AD{I|L}K{M(Oxidation (M))|F}SH{I|L};{I|L}[MT]{I|L}KTSH{I|L};{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[VG]TSH{I|L};[{I|L}A][WE]{I|L}{I|L}W{I|L};[{I|L}A]S{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}W{I|L};[{I|L}A][NG]TR{I|L}{[DA]|[EG]}{I|L};[{I|L}A][NG]T[VG]{I|L}W{I|L};{[SA]|[TG]}{I|L}{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}W{I|L};[HS]{M(Oxidation (M))|F}K{I|L}{I|L}{[DA]|[EG]}{I|L} 9.0074;8.5266;4.1871;3.4728;1.8432;1.7182;1.6806;1.6806;1.1517;1.0149 +;-;-;-;-;-;-;-;-;- + 461 + 1 1.226 48787.5 1.0 9803 4881 14685 HBL1_DMSO_200M_050219_2,14686 HBL1_DMSO_200M_050219_2,14686,DALLKFSHI True True DALLKFSHI 77.343143 522.298327624798 220632360.0 14685.0 nc|ENSG00000139644|P55061-2|TMBIM6;;ENSG00000139644|ENST00000267115|TMBIM6 5.788898944854736 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14687 77.344 5.2 9092300.0 25 0 1496500.0 + 33517 IARVLTVI 8 70 442.79977757158326 883.5850022099665 2 442.8001891970634 MULTI CID FTMS 0 0 0 14685 11081330.0 1.0 0 0.0 2 Unmodified _SILARLVL_ ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENSG00000136942|ENST00000348462|RPL35 34.10243960390752 0.3329570729325616 4 [{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV{I|L} 8 3 + 47.829 0.0 0.0 5.413 5.413 72.989 0.0 0.0 0.0 4.781381439366186 40.8391254042489 4.781381439366186 1.7731749024395782 0 0.9247425010840048 1.3979400086720375 0.4247425010840047 0.0 [{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}V{I|L};[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GKK 5.413;5.2124;1.9051 -;-;- 53 1 1.226 42514.7 1.0 9804 4881 14685 HBL1_DMSO_200M_050219_2,14687 HBL1_DMSO_200M_050219_2,14687,SILARLVL False False IARVLTVI 77.344322 442.800189197063 183889360.0 14685.0 ENST00000487431.1_1_9:127620199-127623861:-|nuORF;;ENSG00000136942|ENST00000348462|RPL35 -0.4281615018844604 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14688 77.346 2.5 23537000.0 25 0 4447500.0 + 15642 IQIMKVEEI 9 79 551.8123501436302 1101.6101473540602 2 551.8132202029228 MULTI CID FTMS 0 0 0 14685 21063616.0 0.7955775596505197 -1 0.0886306762695312 3 Unmodified _IQIMKVEEI_ ENSG00000105640|ENST00000222247|RPL18A;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 47.74868867922204 0.0453060283459952 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}VE{M(Oxidation (M))|F}{I|L} 7 4 52.612 0.0 0.0 4.7759 0.0 0.0 0.0 238.11826250383595 238.11826250383595 33.632447924104554 0.0 0.0 0.0 0 1.805462187404089 0.0 1.1861818737241734 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}VE{M(Oxidation (M))|F}{I|L} 4.7759 - 508 1 1.226 46844.6 1.0 9805 4881 14685 HBL1_DMSO_200M_050219_2,14688 HBL1_DMSO_200M_050219_2,14688,IQIMKVEEI True True IQIMKVEEI 77.345501 551.813220202923 223246176.0 14685.0 ENSG00000105640|ENST00000222247|RPL18A;;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 1.779853105545044 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14689 77.347 10.0 5892200.0 25 0 572380.0 + 21937 LPPKVSVFV 9 82 493.30756668585485 984.6005804385096 2 493.3080627322197 MULTI CID FTMS 0 0 0 14685 4633951.5 0.775360268544506 17 -1.7900314331054688 4 Unmodified _LPPKVSVFV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 25.399314129420983 0.2080152500878129 4 {I|L}P 2 7 43.711 0.0 0.0 4.4395 0.0 0.0 0.0 771.4431537164122 771.4431537164122 1.1260500153457542 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.4395 + + 164 + 1 1.226 47043.1 1.0 9806 4881 14685 HBL1_DMSO_200M_050219_2,14689 HBL1_DMSO_200M_050219_2,14689,LPPKVSVFV False True LPPKVSVFV 77.34668 493.30806273222 157274352.0 14685.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 3.13473916053772 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 14690 77.348 25.0 2413300.0 25 0 185030.0 28536 PTPHVDPTI 9 74 488.759583208201 975.504613483202 2 488.7598449587822 MULTI CID FTMS 0 0 0 14685 2366658.25 1.0 0 0.0 5 Unmodified _PTPHVDPTI_ ENST00000476089.1_1_2:182321937-182323202:+|nuORF 28.486842064014134 0.1687311288560894 4 PT{I|L} 3 6 26.911 0.0 0.0 2.7587 0.0 0.0 646.3093188132574 0.0 646.3093188132574 0.0 -0.7783248807594845 -0.7783248807594845 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 + PT{I|L} 2.7587 + + 125 + 1 1.226 50644.3 1.0 9807 4881 14685 HBL1_DMSO_200M_050219_2,14690 HBL1_DMSO_200M_050219_2,14690,PTPHVDPTI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14691 77.349 31.0 2404700.0 25 0 589070.0 + 32266 RWPDYVREL 9 57 617.3224849501827 1232.6304169671653 2 617.3228027224541 MULTI CID FTMS 0 0 0 14685 1746428.5 0.6824618204813555 4 -0.4377059936523437 6 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 26.020703789607367 0.2001090068861241 4 {I|L}[R{M(Oxidation (M))|F}]VYDPW 8 8 42.128 0.0 0.0 3.4177 0.0 0.0 0.0 153.07859216861564 153.07859216861564 27.43501263708417 0.0 0.0 0.0 0 1.742992819099939 0.0 0.0 0.3807196863200844 {I|L}[R{M(Oxidation (M))|F}]VYDPW 3.4177 - 160 + 1 1.226 61561.0 1.0 9808 4881 14685 HBL1_DMSO_200M_050219_2,14691 HBL1_DMSO_200M_050219_2,14691,RWPDYVREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14692 77.35 43.0 1571000.0 25 0 337880.0 + 18197 KVAELFEKL 9 92 538.8212401588827 1075.6279273845653 2 538.8218871951103 MULTI CID FTMS 0 0 0 14685 1040866.5 0.2845537417977833 -2 0.1927108764648437 7 Unmodified _KVAELFEKL_ ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF 70.49555756994154 0.020907391616941 4 KVAE{I|L}{M(Oxidation (M))|F}EK{I|L} 9 0 + 92.736 0.0 0.0 8.6215 8.6215 87.346 0.0 0.0 0.0 28.027194418743804 4.559319556497243 4.559319556497243 4.559319556497243 0 2.06295299324845 1.154901959985743 0.9361818737241736 0.2302046884880938 + + KVAE{I|L}{M(Oxidation (M))|F}EK{I|L};KVAE{I|L}{M(Oxidation (M))|F}E{I|L}K;KV{I|L}{[CP]|[EA]}{M(Oxidation (M))|F}EK{I|L};KV{I|L}{[CP]|[EA]}{M(Oxidation (M))|F}E{I|L}K;KV{I|L}[DP][YT]K{I|L};KV{I|L}[DP][YT]{I|L}K;KV{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]}NK;KV{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WQ]K;KV{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[RP]{M(Oxidation (M))|F}V;KVA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RP]{M(Oxidation (M))|F}V 8.6215;8.1977;7.808;7.3841;4.3371;3.9132;3.5842;3.3294;3.3272;2.9572 +;-;-;-;-;-;-;-;-;- + 430 + 1 1.226 56697.9 1.0 9809 4881 14685 HBL1_DMSO_200M_050219_2,14692 HBL1_DMSO_200M_050219_2,14692,KVAELFEKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14693 77.352 52.0 711380.0 25 0 55318.0 + 35742 SVIDIINGEAT 11 71 566.2978487988075 1130.581144664415 2 566.2986938357353 MULTI CID FTMS 0 0 0 14685 697212.9375 0.5529627261698614 1 -0.06353759765625 8 Unmodified _SVIDIINGEAT_ ENSG00000168090|ENST00000303904|COPS6 21.53697664764585 0.586507868110548 4 [VS]{NN|[MP]|[D{I|L}]|[EV]}{I|L} 5 6 30.017 0.0 0.0 2.655 0.0 0.0 0.0 600.261295381465 600.261295381465 11.824922882280422 0.0 0.0 0.0 0 0.0 2.0 0.805462187404089 0.0 + [VS]{NN|[MP]|[D{I|L}]|[EV]}{I|L} 2.655 + + 121 1 1.226 34734.0 1.0 9810 4881 14685 HBL1_DMSO_200M_050219_2,14693 HBL1_DMSO_200M_050219_2,14693,SVIDIINGEAT False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14694 77.353 76.0 922040.0 25 0 167840.0 + -1 GQIESINMI 9 93 502.8141560637919 1003.6137591943838 2 502.8143493533134 MULTI CID FTMS 0 0 0 14685 702110.875 0.3675950313136142 2 -0.196990966796875 9 Oxidation (M) _LEKKM(Oxidation (M))KVL_ nc|ENSG00000213079|Q9UPN6-2|SCAF8;ENSG00000213079|ENST00000367178|SCAF8 5.760428011301431 0.7893668129297577 4 {I|L} 1 -1 12.474 0.0 0.0 1.2429 0.0 0.0 872.5187407391088 0.0 872.5187407391088 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2429 + + 37 + 1 1.226 56667.6 1.0 9811 4881 14685 HBL1_DMSO_200M_050219_2,14694 HBL1_DMSO_200M_050219_2,14694,LEKKMKVL False False GQIESINMI 77.353351 502.814349353313 2620831.5 14685.0 nc|ENSG00000213079|Q9UPN6-2|SCAF8;;ENSG00000213079|ENST00000367178|SCAF8 3.9155678749084473 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14695 77.355 76.0 846260.0 25 0 116030.0 + 18322 KVLELDPAL 9 98 499.3001766483848 996.5858003635695 2 499.3000060915947 MULTI CID FTMS 0 0 0 14685 711293.9375 0.5562464326424736 -2 0.1927108764648437 10 Unmodified _KVLELDPAL_ ENSG00000110711|ENST00000279146|AIP 51.41523569358685 0.0372669606867193 4 E{I|L}DPA{I|L} 6 3 47.357 0.0 0.0 4.7519 0.0 0.0 340.24897963691564 0.0 340.24897963691564 0.0 26.721675119240512 0.0 0.0 0 1.5924778212679485 0.0 1.079689690656103 0.0 + E{I|L}DPA{I|L} 4.7519 + + 255 1 1.226 55658.8 1.0 9812 4881 14685 HBL1_DMSO_200M_050219_2,14695 HBL1_DMSO_200M_050219_2,14695,KVLELDPAL True True KVLELDPAL 77.355101 499.300006091595 9855638.0 14685.0 ENSG00000110711|ENST00000279146|AIP 4.311079899470012 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14696 77.357 99.0 639460.0 25 0 55254.0 + 16203 IVIQQDDEIRL 11 68 671.372172438947 1340.729791944694 2 671.3727294802666 MULTI CID FTMS 0 0 0 14685 652259.625 0.7000908373911415 1 -0.06353759765625 11 Unmodified _IVIQQDDEIRL_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000525455.5_1_11:62530233-62533976:+|nuORF;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 73.1962812333195 0.0231417158388345 4 {I|L}V{I|L}QQDDE{I|L}R{I|L} 11 0 + 118.21 0.0 0.0 8.8166 8.8166 92.114 0.0 0.0 0.0 103.94249069215292 11.188821499629212 11.188821499629212 9.128498242811006 0 1.2059771852360797 1.6989700043360187 0.805462187404089 0.805462187404089 + + {I|L}V{I|L}QQDDE{I|L}R{I|L};{I|L}V{I|L}Q[AG]DDE{I|L}R{I|L};{I|L}V{I|L}[AG]QDDE{I|L}R{I|L};{I|L}V{I|L}[AG][AG]DDE{I|L}R{I|L} 8.8166;8.1358;8.1358;7.4572 +;-;-;- + 216 + 1 1.226 56940.6 1.0 9813 4881 14685 HBL1_DMSO_200M_050219_2,14696 HBL1_DMSO_200M_050219_2,14696,IVIQQDDEIRL True True IVIQQDDEIRL 77.357253 671.372729480267 14133264.0 14685.0 ENST00000526368.1_1_11:62530297-62533976:+|nuORF;;ENSG00000168002|ENST00000301788|POLR2G;;ENST00000527435.5_1_11:62529161-62533976:+|nuORF;;ENST00000525455.5_1_11:62530233-62533976:+|nuORF 7.243768533070882 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14697 77.359 79.0 455930.0 25 0 46189.0 + 5452 DLQLVFWVM 9 64 575.8030747063212 1149.5915964794424 2 575.8035766482353 MULTI CID FTMS 0 0 0 14685 627066.8125 0.5503802660984983 1 -0.06353759765625 12 Unmodified _DLQLVFWVM_ REV__ENSG00000164169|ENST00000322396|PRMT9;REV__nc|ENSG00000164169|Q6P2P2-2|PRMT9 14.838274106304384 0.4350285940865338 4 VTT 3 -1 19.297 0.0 0.0 1.6786 0.0 0.0 581.2712972624487 264.1357515924438 845.4070488548925 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 VTT 1.6786 - 74 + 1 1.226 36078.2 1.0 9814 4881 14685 HBL1_DMSO_200M_050219_2,14697 HBL1_DMSO_200M_050219_2,14697,DLQLVFWVM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14698 77.36 56.0 971110.0 25 0 86843.0 + 37033 TFVALYHVL 9 80 531.8007864541105 1061.587019975021 2 531.8015624880791 MULTI CID FTMS 0 0 0 14685 630961.9375 0.089527354668899 4 -0.4377059936523437 13 Unmodified _TFVALYHVL_ ENSG00000171804|ENST00000447313|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;nc|ENSG00000171804|Q6ZQQ6|WDR87 34.18733598223924 0.1073653526364521 4 {M(Oxidation (M))|F}TVDQ{I|L}RA{I|L} 9 7 + 51.257 0.0 0.0 4.8284 4.8284 80.757 0.0 0.0 0.0 8.737125054200234 8.830080363116721 8.737125054200234 9.208187539523747 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}TVDQ{I|L}RA{I|L};{M(Oxidation (M))|F}TVD[AG]{I|L}RA{I|L};{M(Oxidation (M))|F}TVD{[NV]|[RG]}RV{I|L};Y[{I|L}A]DQ{I|L}RA{I|L};YP[NS]{I|L}TRV{I|L};{M(Oxidation (M))|F}TV[{I|L}A][DG]RA{I|L};{M(Oxidation (M))|F}NEA{I|L}TRV{I|L};{M(Oxidation (M))|F}TV[{I|L}A]{[WN]|[YH]}V{I|L};Y[{I|L}A]D[AG]{I|L}RA{I|L};{M(Oxidation (M))|F}NE{[TV]|[{I|L}S]}{I|L}RA{I|L} 4.8284;3.961;3.3457;3.2291;3.2144;2.7618;2.6356;2.4301;2.3617;2.0949 -;-;-;-;-;-;-;-;-;- 231 + 1 1.226 52152.7 1.0 9815 4881 14685 HBL1_DMSO_200M_050219_2,14698 HBL1_DMSO_200M_050219_2,14698,TFVALYHVL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14699 77.364 200.0 367710.0 25 0 82843.0 + 18023 KSGLRLTFQLF 11 108 655.3823079751647 1308.7500630171294 2 655.3826171755791 MULTI CID FTMS 0 0 0 14685 541511.5 0.7207488574659561 2 -0.196990966796875 14 Unmodified _KSGLRLTFQLF_ REV__ENSG00000189056|ENST00000428762|RELN;REV__nc|ENSG00000189056|P78509-2|RELN;REV__nc|ENSG00000189056|P78509-3|RELN 2.498486711656943 0.8633599123570009 4 V 1 -1 10.379 0.0 0.0 0.79302 0.0 0.0 1191.6705627503309 0.0 1191.6705627503309 0.0 7.904353461290121 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.79302 - 15 + 1 1.226 72286.2 1.0 9816 4881 14685 HBL1_DMSO_200M_050219_2,14699 HBL1_DMSO_200M_050219_2,14699,KSGLRLTFQLF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14700 77.366 54.0 1113800.0 25 0 172950.0 + 22750 LQLNYNQLI 9 92 559.8118982685821 1117.6092436039642 2 559.8127319216728 MULTI CID FTMS 0 0 0 14685 497037.03125 0.5319434959167415 -2 0.1927108764648437 15 Unmodified _LQLNYNQLI_ ENSG00000214954|ENST00000448384|LRRC69 26.88365393820708 0.1891292719743517 4 [Q{I|L}]{I|L}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[Q{I|L}]{I|L} 9 3 + 51.149 0.0 0.0 4.5766 4.5766 81.017 0.0 0.0 0.0 25.158616535208896 9.884877399047872 9.884877399047872 9.960762528683702 0 1.274227503252014 1.6989700043360187 0.0 0.3054621874040891 [Q{I|L}]{I|L}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[Q{I|L}]{I|L};[Q{I|L}]{M(Oxidation (M))|F}[KT]Q[Q{I|L}]{I|L};[Q{I|L}]{I|L}{M(Oxidation (M))|F}P[{I|L}T]{[WT]|[RM]};[Q{I|L}]{I|L}[YV][VP]{[WT]|[RM]};[{I|L}T]TWP{M(Oxidation (M))|F}[Q{I|L}]{I|L};[AG]{I|L}{I|L}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[Q{I|L}]{I|L};{[QN]|[E{I|L}]|[KN]}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}[Q{I|L}]{I|L};[AG]{I|L}{M(Oxidation (M))|F}[KT]Q[Q{I|L}]{I|L};[VP]KHH{M(Oxidation (M))|F}[Q{I|L}]{I|L};[AG]{I|L}{I|L}{M(Oxidation (M))|F}P[{I|L}T]{[WT]|[RM]} 4.5766;3.6854;3.1683;3.0855;2.3255;2.3153;2.1236;1.424;1.1043;0.9069 -;-;-;-;-;-;-;-;-;- 634 1 1.226 49830.8 1.0 9817 4881 14685 HBL1_DMSO_200M_050219_2,14700 HBL1_DMSO_200M_050219_2,14700,LQLNYNQLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14701 77.368 101.0 1165800.0 25 0 125290.0 + 921 AFALVSQAY 9 138 485.2554029313915 968.496252929583 2 485.2562744021416 MULTI CID FTMS 0 0 0 14685 382895.125 0.8322540591649097 -2 0.1927108764648437 16 Unmodified _AFALVSQAY_ ENSG00000198612|ENST00000354371|COPS8;nc|ENSG00000198612|Q99627-2|COPS8 24.67388899826682 0.2172451872415813 4 [Q{I|L}]{I|L}{M(Oxidation (M))|F}VP 6 8 27.455 0.0 0.0 2.8348 0.0 0.0 0.0 268.0595776845477 268.0595776845477 -3.109266096199267 0.0 -3.109266096199267 0.0 0 0.3494850021680094 0.4814860601221125 0.0 0.4531198197908842 [Q{I|L}]{I|L}{M(Oxidation (M))|F}VP 2.8348 - 1646 1 1.226 91250.4 1.0 9818 4881 14685 HBL1_DMSO_200M_050219_2,14701 HBL1_DMSO_200M_050219_2,14701,AFALVSQAY False True AFALVSQAY 77.367905 485.256274402142 4663127.0 14685.0 ENSG00000198612|ENST00000354371|COPS8;;nc|ENSG00000198612|Q99627-2|COPS8 1.835056185722351 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14702 77.37 125.0 560590.0 25 0 35273.0 + 43613 YAFPKSITV 9 125 513.2870682780165 1024.5595836228329 2 513.2877075076103 MULTI CID FTMS 0 0 0 14685 359534.3125 0.0428370240152773 6 -0.6609268188476562 17 Unmodified _YAFPKSITV_ ENSG00000155380|ENST00000369626|SLC16A1;nc|ENSG00000155380|P53985-2|SLC16A1 37.97399986684836 0.0865783450051559 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}M 4 6 41.114 0.0 0.0 4.0129 0.0 0.0 0.0 509.3190401666625 509.3190401666625 19.569400253826785 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}M 4.0129 - 642 + 1 1.226 58890.4 1.0 9819 4881 14685 HBL1_DMSO_200M_050219_2,14702 HBL1_DMSO_200M_050219_2,14702,YAFPKSITV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14703 77.382 651.0 217340.0 25 0 13673.0 -1 0 124 644.656949076963 1930.949017831089 3 644.9916869997978 MULTI CID FTMS 0 0 0 14685 293746.40625 0.6146815207799227 2 -0.196990966796875 18 4 {[DA]|[EG]}V 3 -1 37.447 0.0 0.0 1.9393 0.0 0.0 0.0 1642.7933226008734 1642.7933226008734 15.16013680409234 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V 1.9393 - 416 1 1.226 110003.2 1.0 9820 4881 14685 HBL1_DMSO_200M_050219_2,14703 HBL1_DMSO_200M_050219_2,14703, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14704 77.396 800.0 157470.0 25 0 7978.0 + 28196 WYMDNPQNL 9 181 590.8484100788709 1179.6822672245416 2 590.8488647341728 MULTI CID FTMS 0 0 0 14685 188063.984375 0.6714629173639631 4 -0.4377059936523437 19 Unmodified _PQDLKLPKEL_ ENSG00000107679|ENST00000368990|PLEKHA1;nc|ENSG00000107679|Q9HB21-2|PLEKHA1;ENSG00000169499|ENST00000617275|PLEKHA2 18.1463463914782 0.5430639438673815 4 [DP]Q{I|L}H 5 7 14.495 0.0 0.0 1.2287 0.0 0.0 0.0 586.3708407931541 586.3708407931541 2.900923989986408 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.25 0.4793036574208875 [DP]Q{I|L}H 1.2287 - 477 1 1.226 96593.1 0.9700000286102296 9821 4881 14685 HBL1_DMSO_200M_050219_2,14704 HBL1_DMSO_200M_050219_2,14704,PQDLKLPKEL False False WYMDNPQNL 77.395662 590.848864734173 874831.125 14685.0 ENSG00000107679|ENST00000368990|PLEKHA1;;nc|ENSG00000107679|Q9HB21-2|PLEKHA1;;ENSG00000169499|ENST00000617275|PLEKHA2 5.52282206217448 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14705 77.402 363.0 357720.0 25 0 35642.0 + + 11847 AVPEKLQPLL 10 154 554.341440224548 1106.668327515896 2 554.3420898318291 MULTI CID FTMS 0 0 0 14685 178104.90625 0.4716513815068959 4 -0.4377059936523437 20 Unmodified _GLRRWPLPL_ ENSG00000179933|ENST00000319074|C14orf119 19.438996006549623 0.310492472477042 4 {[VA]|[{I|L}G]}A{I|L}QA 6 -1 31.348 0.0 0.0 2.8327 0.0 0.0 0.0 550.3395142422943 550.3395142422943 5.382418650521359 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[VA]|[{I|L}G]}A{I|L}QA 2.8327 - 1659 1 1.226 103827.4 1.0 9822 4881 14685 HBL1_DMSO_200M_050219_2,14705 HBL1_DMSO_200M_050219_2,14705,GLRRWPLPL False False AVPEKLQPLL 77.402207 554.342089831829 8808841.0 14685.0 ENSG00000179933|ENST00000319074|C14orf119 3.7340594132741294 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14707 77.407 54.0 1664100.0 25 0 347450.0 + 16962 KIPQVLVKL 9 101 519.3574523450746 1036.7003517569492 2 519.3582641482353 MULTI CID FTMS 0 0 0 14706 1008874.4375 0.8902166776027381 1 -0.133453369140625 1 Unmodified _KIPQVLVKL_ ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24 46.020951573049366 0.0490941689151868 4 [QP]V{I|L}VK{I|L}K{I|L} 9 4 + 51.608 0.0 0.0 4.9781 4.9781 76.162 0.0 0.0 0.0 14.609201009160683 7.1919646325935815 7.1919646325935815 4.771212547196626 0 0.5044321917401079 0.744727494896694 0.0 0.3252574989159953 [QP]V{I|L}VK{I|L}K{I|L};[QP]V{I|L}V{I|L}KK{I|L};[QP]VV{I|L}K{I|L}K{I|L};[QP]VV{I|L}{I|L}KK{I|L};[AG]PV{I|L}VK{I|L}K{I|L};[K{I|L}][QP]V{I|L}VK{I|L};[K{I|L}]{I|L}[NP]{I|L}VK{I|L};[AG]PV{I|L}V{I|L}KK{I|L};[{I|L}P]N{I|L}VK{I|L}K{I|L};[AG]PVV{I|L}K{I|L}K{I|L} 4.9781;4.5179;4.3039;3.8436;3.5689;3.3189;3.3189;3.1087;3.0982;2.8947 -;-;-;-;-;+;-;-;-;- + 218 1 1.226 76749.9 1.0 9823 4882 14706 HBL1_DMSO_200M_050219_2,14707 HBL1_DMSO_200M_050219_2,14707,KIPQVLVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14708 77.421 800.0 192540.0 25 0 22740.0 + 38782 TVDLRLQPTRK 11 199 663.8948905101719 1325.7752280871437 2 663.8943359255791 MULTI CID FTMS 0 0 0 14706 173188.5 0.5573289795819856 3 -0.3741683959960937 2 Unmodified _TVDLRLQPTRK_ REV__ENSG00000185261|ENST00000682413|KIAA0825;REV__ENST00000504117.1_1_5:93752768-93812878:-|nuORF;REV__nc|ENSG00000185261|Q8IV33-3|KIAA0825;REV__nc|ENSG00000185261|Q8IV33|KIAA0825 3.876331618118854 0.8568591502966533 4 [H{I|L}][{M(Oxidation (M))|F}E]{I|L}H{I|L}V 8 -1 30.099 0.0 0.0 2.2703 0.0 0.0 0.0 334.21215370653744 334.21215370653744 12.359856381998778 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}][{M(Oxidation (M))|F}E]{I|L}H{I|L}V 2.2703 - 1522 1 1.226 122882.9 0.9900000095367432 9824 4882 14706 HBL1_DMSO_200M_050219_2,14708 HBL1_DMSO_200M_050219_2,14708,TVDLRLQPTRK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14709 77.422 51.0 1651300.0 25 0 264130.0 + 3286 AYHGLTVPL 9 121 485.7719108188399 969.5292687044798 2 485.7716552615166 MULTI CID FTMS 0 0 0 14706 429145.90625 0.2018169370301871 -2 0.1521682739257812 3 Unmodified _AYHGLTVPL_ ENSG00000113732|ENST00000519374|ATP6V0E1 40.44857923139169 0.0729940656229577 4 [Q{I|L}]{[WN]|[YH]}TVP{I|L} 8 4 + 36.335 0.0 0.0 3.7477 3.7477 72.38 0.0 0.0 0.0 3.22559982972642 12.294957934675086 3.22559982972642 5.412608425507944 0 1.024227503252014 0.5228787452803376 1.0 0.1989700043360188 [Q{I|L}]{[WN]|[YH]}TVP{I|L};[HA]YG{I|L}TVP{I|L};{[HG]|PP}YA{I|L}TVP{I|L};[Q{I|L}]{I|L}[C(Carbamidomethyl (C))Q]VP{I|L};[VP]G[C(Carbamidomethyl (C))K]TVP{I|L};{[QN]|[E{I|L}]|[KN]}D{[RE]|[WV]}VP{I|L};{[QN]|[E{I|L}]|[KN]}DKQQP{I|L};{[QS]|[NT]}A{[QV]|[N{I|L}]|[RA]|[KV]}EVP{I|L};{[HG]|PP}Y{[RE]|[WV]}VP{I|L};{[SA]|[TG]}Q{[QV]|[N{I|L}]|[RA]|[KV]}EVP{I|L} 3.7477;3.1894;2.6831;2.0953;1.8904;1.7379;1.5327;1.1694;0.70196;0.64532 -;-;-;-;-;-;-;-;-;- 515 1 1.226 68319.6 1.0 9825 4882 14706 HBL1_DMSO_200M_050219_2,14709 HBL1_DMSO_200M_050219_2,14709,AYHGLTVPL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14710 77.425 187.0 614850.0 25 0 66176.0 + -1 AQLACLPYN 9 138 525.2590663488576 1048.503579764515 2 525.2595703005791 MULTI CID FTMS 0 0 0 14706 278402.84375 0.6261818193064148 -1 0.06353759765625 4 Carbamidomethyl (C) _AQLAC(Carbamidomethyl (C))LPYN_ REV__ENSG00000166402|ENST00000299506|TUB;REV__nc|ENSG00000166402|P50607-2|TUB 26.88365393820708 0.1891292719743517 4 [QA]{I|L}VG{I|L}N{[MG]|[TS]}{M(Oxidation (M))|F} 10 -1 + 45.619 0.0 0.0 4.3509 4.3509 82.649 0.0 0.0 0.0 17.53721330956307 4.260691023043776 4.260691023043776 20.74669164915594 0 1.1331596456423734 0.9208187539523752 0.25 1.110924374808178 [QA]{I|L}VG{I|L}N{[MG]|[TS]}{M(Oxidation (M))|F};[QA]KMA[WD]TV;[QA]KMA[WD]S{I|L};[QA]{I|L}[WM][NS]TV;[QA]{I|L}[WM][NS]S{I|L};{[C(Carbamidomethyl (C))G]|[NC]}A{I|L}K[WD]TV;{[C(Carbamidomethyl (C))G]|[NC]}A{I|L}K[WD]S{I|L};[QA]{[DS]|[MA]|[CV]|TT}K[WD]TV;[QA]{[DS]|[MA]|[CV]|TT}K[WD]S{I|L};[QA]KM[NG][NS]TV 4.3509;2.3722;2.2967;2.2382;2.1627;2.1388;2.0633;1.5376;1.4621;1.3546 -;-;-;-;-;-;-;-;-;- 773 + 1 1.226 95280.3 1.0 9826 4882 14706 HBL1_DMSO_200M_050219_2,14710 HBL1_DMSO_200M_050219_2,14710,AQLACLPYN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14711 77.43 261.0 239230.0 25 0 19008.0 + 23290 LSYKVELVVN 10 108 582.3352849449232 1162.6560169566462 2 582.3356201052666 MULTI CID FTMS 0 0 0 14706 191091.5625 0.321364830775699 5 -0.5973892211914062 5 Unmodified _LSYKVELVVN_ REV__ENSG00000204852|ENST00000397659|TCTN1;REV__ENST00000397656.8_1_12:111066004-111085694:+|nuORF;REV__ENST00000495659.6_1_12:111052207-111085694:+|nuORF;REV__nc|ENSG00000204852|Q2MV58-3|TCTN1;REV__nc|ENSG00000204852|Q2MV58-4|TCTN1;REV__nc|ENSG00000204852|Q2MV58-5|TCTN1;REV__nc|ENSG00000204852|Q2MV58-6|TCTN1;REV__nc|ENSG00000204852|Q2MV58|TCTN1 10.073929032068715 0.6785112666868882 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q 3 -1 17.28 0.0 0.0 1.4863 0.0 0.0 0.0 787.4525006815087 787.4525006815087 6.021096306563191 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q 1.4863 - 95 1 1.226 53844.7 1.0 9827 4882 14706 HBL1_DMSO_200M_050219_2,14711 HBL1_DMSO_200M_050219_2,14711,LSYKVELVVN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14712 77.444 800.0 154230.0 25 0 21879.0 + 20135 LKPFHLRQLS 10 147 619.8692950800139 1237.7240372268277 2 619.8692504763603 MULTI CID FTMS 0 0 0 14706 159391.75 0.2105874731787233 10 -1.0981369018554688 6 Unmodified _LKPFHLRQLS_ REV__ENST00000490191.5_1_6:33240007-33240325:+|nuORF 8.155526934196011 0.6889124077178598 4 {I|L} 1 -1 10.837 0.0 0.0 0.8756 0.0 0.0 1106.6289272188185 0.0 1106.6289272188185 0.0 1.2333616667069425 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.8756 + + 171 + 1 1.226 92198.5 0.959999978542328 9828 4882 14706 HBL1_DMSO_200M_050219_2,14712 HBL1_DMSO_200M_050219_2,14712,LKPFHLRQLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14713 77.458 800.0 241100.0 25 0 12745.0 -1 PFHMDFMSL 9 198 570.7462724044103 1139.4779918756203 2 570.7462646365166 MULTI CID FTMS 0 0 0 14706 140573.734375 0.4304220229098643 5 -0.5973892211914062 7 Oxidation (M) _PFHM(Oxidation (M))DFMSL_ ENST00000393085.3_1_7:135614012-135614063:-|nuORF 18.13498045792455 0.3457906370836843 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PWPE 8 -1 39.319 0.0 0.0 3.4506 0.0 0.0 0.0 109.9809489292708 109.9809489292708 3.894615430169005 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.8494850021680094 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PWPE 3.4506 - 3268 1 1.226 149416.7 0.8899999856948853 9829 4882 14706 HBL1_DMSO_200M_050219_2,14713 HBL1_DMSO_200M_050219_2,14713,PFHMDFMSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14714 77.472 800.0 199260.0 25 0 19626.0 21659 LPLKLSHV 8 151 453.7924634572879 0 453.7922241091728 PEAK CID FTMS 0 0 0 14706 124767.25 0.0038469096027541 48 -5.190238952636719 8 Unmodified _LPLKLSHV_ ENSG00000173621|ENST00000309602|LRFN4 28.486842064014134 0.2575685520298453 4 PP 2 7 16.133 0.0 0.0 1.7815 0.0 0.0 113.08417151848388 595.3580956465104 708.4422671649943 0.0 0.0 0.0 0.0 0 0.516375387189108 0.0 0.0 0.0 PP 1.7815 - 138 + 1 1.226 124842.0 0.6399999856948853 9830 4882 14706 HBL1_DMSO_200M_050219_2,14714 HBL1_DMSO_200M_050219_2,14714,LPLKLSHV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14715 77.486 800.0 155150.0 25 0 18244.0 -1 TICLRIIANIL 11 164 650.396309788722 1298.7780666442438 2 650.3961059451103 MULTI CID FTMS 0 0 0 14706 118425.78125 0.5089799529355133 -4 0.364776611328125 9 Carbamidomethyl (C) _TIC(Carbamidomethyl (C))LRIIANIL_ ENSG00000188869|ENST00000359440|TMC3;ENST00000559982.1_1_15:81630174-81666445:-|nuORF;nc|ENSG00000188869|Q7Z5M5-2|TMC3 8.745405648335112 0.8338865417133445 4 {I|L} 1 -1 11.783 0.0 0.0 0.90722 0.0 0.0 1167.6830024126016 0.0 1167.6830024126016 0.0 2.105026563703652 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.90722 + + 197 + 1 1.226 103199.3 0.8799999952316284 9831 4882 14706 HBL1_DMSO_200M_050219_2,14715 HBL1_DMSO_200M_050219_2,14715,TICLRIIANIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14716 77.501 800.0 54600.0 25 0 11006.0 -1 0 46 1164.1303276511082 0 1164.126879870892 PEAK CID FTMS 0 0 0 14706 131712.796875 1.0 0 0.0 10 4 E 1 -1 5.4846 0.0 0.0 0.23577 0.0 0.0 1670.0168065699916 524.1627901666624 2194.179596736654 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.23577 - 3 + 1 1.226 42861.4 0.7400000095367432 9832 4882 14706 HBL1_DMSO_200M_050219_2,14716 HBL1_DMSO_200M_050219_2,14716, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14717 77.515 800.0 257480.0 25 0 19196.0 + 6483 EAHFVPLV 8 194 456.2533708598896 910.4921887865792 2 456.2536498904228 MULTI CID FTMS 0 0 0 14706 121930.859375 1.0 0 0.0 11 Unmodified _EAHFVPLV_ ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000468280.5_1_19:52693376-52714746:+|nuORF 40.44857923139169 0.2267865117615937 4 [{I|L}P][C(Carbamidomethyl (C))N]VP{I|L}V 8 4 + 29.359 0.0 0.0 3.2245 3.2245 69.641 0.0 0.0 0.0 12.931825014007217 11.886795656870817 11.886795656870817 4.313637641589871 0 0.747425010840047 2.0 0.0 0.0 [{I|L}P][C(Carbamidomethyl (C))N]VP{I|L}V;[{I|L}P]G{[C(Carbamidomethyl (C))G]|[NC]}VP{I|L}V;[{I|L}P][C(Carbamidomethyl (C))N]PV{I|L}V;[{I|L}P]G{[C(Carbamidomethyl (C))G]|[NC]}PV{I|L}V;{[{M(Oxidation (M))|F}H]|[RQ]}{[CP]|[EA]}VP{I|L}V;{[VA]|[{I|L}G]}P{[C(Carbamidomethyl (C))G]|[NC]}VP{I|L}V;[NP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}VP{I|L}V;{[VA]|[{I|L}G]}P{[C(Carbamidomethyl (C))G]|[NC]}PV{I|L}V;{[{M(Oxidation (M))|F}H]|[RQ]}{[CP]|[EA]}PV{I|L}V;[{I|L}T]QN[HS]{I|L}V 3.2245;2.7507;2.641;2.1672;1.3556;1.0548;0.96884;0.47138;0.41495;0.35585 -;-;-;-;-;-;-;-;-;- 1287 1 1.226 157011.2 0.6200000047683716 9833 4882 14706 HBL1_DMSO_200M_050219_2,14717 HBL1_DMSO_200M_050219_2,14717,EAHFVPLV False True EAHFVPLV 77.514771 456.253649890423 530993.0625 14706.0 ENST00000468280.5_1_19:52693376-52714746:+|nuORF;;ENSG00000105568|ENST00000322088|PPP2R1A 2.2476782302061715 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14718 77.522 325.0 280200.0 25 0 22494.0 + 12478 GVAPDWPRKLL 11 115 626.3616014067157 1250.7086498802314 2 626.3605224490166 MULTI CID FTMS 0 0 0 14706 97495.515625 0.1493587570864894 -3 0.2562484741210937 12 Unmodified _GVAPDWPRKLL_ REV__ENSG00000114982|ENST00000431828|KANSL3;REV__ENST00000447759.5_3_2:97261350-97293793:-|nuORF;REV__ENST00000487070.5_1_2:97267510-97285240:-|nuORF;REV__ENST00000597150.5_1_2:97261350-97297069:-|nuORF;REV__nc|ENSG00000114982|Q9P2N6-2|KANSL3;REV__nc|ENSG00000114982|Q9P2N6-4|KANSL3;REV__nc|ENSG00000114982|Q9P2N6-5|KANSL3;REV__nc|ENSG00000114982|Q9P2N6-6|KANSL3;REV__nc|ENSG00000114982|Q9P2N6-8|KANSL3;REV__nc|ENSG00000114982|Q9P2N6|KANSL3 9.38312468134398 0.8308777417566128 4 {I|L} 1 -1 10.181 0.0 0.0 0.81402 0.0 0.0 1119.6135856485892 0.0 1119.6135856485892 0.0 3.1913608199120347 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.81402 + + 133 + 1 1.226 73883.1 1.0 9834 4882 14706 HBL1_DMSO_200M_050219_2,14718 HBL1_DMSO_200M_050219_2,14718,GVAPDWPRKLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14719 77.536 800.0 132430.0 25 0 9294.9 + 17906 KQTDKLRISL 10 162 601.3662971821959 1200.7180414311918 2 601.3682128787041 MULTI CID FTMS 0 0 0 14706 94817.2109375 1.0 0 0.0 13 Unmodified _KQTDKLRISL_ REV__ENST00000509330.5_1_6:64346708-64356463:+|nuORF 26.268140514670165 0.3785003716575977 4 {[QN]|[E{I|L}]|[KN]}G{[ET]|[MV]}[{I|L}A]KV 9 -1 32.007 0.0 0.0 2.6656 0.0 0.0 0.0 257.1525866794918 257.1525866794918 -1.6186314554223742 0.0 -1.6186314554223742 0.0 0 0.0 0.8538719643217619 0.5941876774005249 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}G{[ET]|[MV]}[{I|L}A]KV 2.6656 - 3055 1 1.226 77343.6 0.7699999809265137 9835 4882 14706 HBL1_DMSO_200M_050219_2,14719 HBL1_DMSO_200M_050219_2,14719,KQTDKLRISL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14721 77.54 38.0 1082500.0 25 0 85185.0 + 28857 QAIERYLVV 9 75 545.8164761257839 1089.6183993183677 2 545.8173095583916 MULTI CID FTMS 0 0 0 14720 649056.6875 0.1901439306319433 3 -0.2978668212890625 1 Unmodified _QAIERYLVV_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000470302.5_1_2:230656574-230657731:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 29.081581746732265 0.1611639662936252 4 [QA]R[QP]Y{I|L}V 8 4 23.906 0.0 0.0 2.194 0.0 0.0 0.0 131.07809105104266 131.07809105104266 3.900925144087786 0.0 0.0 0.0 0 0.3807196863200844 0.9208187539523752 0.0 0.0 [QA]R[QP]Y{I|L}V 2.194 - 71 1 1.226 39175.9 1.0 9836 4883 14720 HBL1_DMSO_200M_050219_2,14721 HBL1_DMSO_200M_050219_2,14721,QAIERYLVV False True QAIERYLVV 77.540137 545.817309558392 54960348.0 14720.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12;;ENST00000470302.5_1_2:230656574-230657731:-|nuORF 6.348366737365723 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14722 77.541 22.0 2430300.0 25 0 268180.0 34280 SLQSREVGKAL 11 68 594.3425712038348 1186.6705894744696 2 594.3433105349541 MULTI CID FTMS 0 0 0 14720 2272921.75 1.0 0 0.0 2 Unmodified _SLQSREVGKAL_ ENSG00000105136|ENST00000221735|ZNF419;ENST00000523439.1_1_19:58003464-58005455:+|nuORF;nc|ENSG00000105136|Q96HQ0-2|ZNF419;nc|ENSG00000105136|Q96HQ0-3|ZNF419;nc|ENSG00000105136|Q96HQ0-4|ZNF419;nc|ENSG00000105136|Q96HQ0-5|ZNF419;nc|ENSG00000105136|Q96HQ0-6|ZNF419 14.40537977576856 0.7354982482299568 4 VV{M(Oxidation (M))|F}PE 5 10 44.253 0.0 0.0 3.7291 0.0 0.0 0.0 612.3474215143186 612.3474215143186 20.607346925073955 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 VV{M(Oxidation (M))|F}PE 3.7291 - 55 + 1 1.226 48270.6 1.0 9837 4883 14720 HBL1_DMSO_200M_050219_2,14722 HBL1_DMSO_200M_050219_2,14722,SLQSREVGKAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14723 77.542 22.0 2410400.0 25 0 302980.0 + 4449 DAWRVPLKV 9 80 542.3188701810047 1082.6231874288094 2 542.3193847537041 MULTI CID FTMS 0 0 0 14720 1439819.875 1.0 0 0.0 3 Unmodified _DAWRVPLKV_ ENSG00000157212|ENST00000404141|PAXIP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;nc|ENSG00000157212|Q6ZW49-2|PAXIP1 27.088373467376528 0.1865245257266215 4 {[DA]|[EG]}[WR]VP{I|L}KV 9 0 + 41.563 0.0 0.0 3.8391 3.8391 81.68 0.0 0.0 0.0 4.383024673460056 28.46455617469936 4.383024673460056 31.62530201418295 0 0.8252574989159953 1.0457574905606752 0.0 0.0 + + {[DA]|[EG]}[WR]VP{I|L}KV;[VP][RD][RV]DKV;[VP][RD]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KV;[VP][RD][RV]SRV 3.8391;0.91797;0.63992;0.17808 +;-;-;- + 143 1 1.226 48669.3 1.0 9838 4883 14720 HBL1_DMSO_200M_050219_2,14723 HBL1_DMSO_200M_050219_2,14723,DAWRVPLKV False True DAWRVPLKV 77.542496 542.319384753704 18833897.0 14720.0 nc|ENSG00000157212|Q6ZW49-1|PAXIP1;;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;;ENSG00000157212|ENST00000404141|PAXIP1;;nc|ENSG00000157212|Q6ZW49-2|PAXIP1;;ENST00000457196.5_1_7:154735861-154782774:-|nuORF 4.981628100077312 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14724 77.544 36.0 1515400.0 25 0 176020.0 + 4450 DAWRVPLKV 9 97 361.8818947246476 1082.6238547741427 3 361.8817016482353 MULTI CID FTMS 0 0 0 14720 1398629.25 1.0 0 0.0 4 Unmodified _DAWRVPLKV_ ENSG00000157212|ENST00000404141|PAXIP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;nc|ENSG00000157212|Q6ZW49-2|PAXIP1 28.49450938151212 0.1686335738423394 4 {[DA]|[EG]}[WR]VP{I|L}KV 9 0 {[DA]|[EG]}[WR]V + + 12.397 25.304 4.0337 1.1451 1.1451 44.248 0.0 0.0 0.0 0.0 -12.906943274286888 -12.906943274286888 0.0 0 0.0 0.0 0.0 0.25 + + {[DA]|[EG]}[WR]VP{I|L}KV 1.1451 + + 90 + 1 1.226 52167.1 1.0 9839 4883 14720 HBL1_DMSO_200M_050219_2,14724 HBL1_DMSO_200M_050219_2,14724,DAWRVPLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14725 77.545 38.0 1065900.0 25 0 281140.0 + 23303 LTAAMKRRRY 10 55 633.3691586956885 1264.723764458177 2 633.3696166872978 MULTI CID FTMS 0 0 0 14720 1267716.125 0.6301118897872424 -4 0.3897018432617187 5 Unmodified _LTAAMKRRRY_ REV__ENST00000575079.1_1_17:4699465-4700091:+|nuORF 0.4007161486938917 0.7247829448918255 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.226 40223.5 1.0 9840 4883 14720 HBL1_DMSO_200M_050219_2,14725 HBL1_DMSO_200M_050219_2,14725,LTAAMKRRRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14726 77.547 89.0 804230.0 25 0 152800.0 -1 0 75 366.7199368968371 731.4253208604742 2 366.7198364138603 MULTI CID FTMS 0 0 0 14720 618893.9375 0.7624551969256332 2 -0.2407150268554687 6 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KM 6 -1 + 54.354 0.0 0.0 7.4312 7.4312 80.936 0.0 0.0 0.0 26.478174818886373 2.138798199450811 2.138798199450811 2.138798199450811 0 0.6109243748081782 2.0 0.0 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KM;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}MK 7.4312;7.1388 -;- 50 + 1 1.226 61654.5 1.0 9841 4883 14720 HBL1_DMSO_200M_050219_2,14726 HBL1_DMSO_200M_050219_2,14726, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14727 77.55 147.0 782840.0 25 0 125250.0 + + 33332 SILEDPPSI 9 93 969.5051479620832 968.4978714954832 1 971.5090209841728 MULTI CID FTMS 0 0 0 14720 506801.46875 1.0 0 0.0 7 Unmodified _SFYKQPSL_ nc|ENSG00000064102|Q9NVM9-2|INTS13;ENSG00000064102|ENST00000261191|INTS13 10.823927491677226 0.7510103885582552 4 {[TV]|[{I|L}S]}{I|L}DNTV[HA] 9 -1 + 28.94 0.0 0.0 2.9881 2.9881 76.023 0.0 0.0 0.0 7.265968099310086 8.288245576287263 7.265968099310086 9.794168526577618 0 0.1822333069283654 1.3979400086720375 0.9247425010840048 0.0 {[TV]|[{I|L}S]}{I|L}DNTV[HA];[EP]VR[DG]P{[TV]|[{I|L}S]};{[QS]|[NT]}A{[QN]|[E{I|L}]|[KN]}PV[EP];{[QS]|[NT]}D[{I|L}V]TV[HA];{[ES]|[DT]|[{I|L}C]}[RD]RV[HA];{[QN]|[E{I|L}]|[KN]}D[KG]TV[HA];{[QV]|[N{I|L}]|[RA]|[KV]}V[HC]{I|L}[RD];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V[Y{M(Oxidation (M))|F}]P{[TV]|[{I|L}S]};{[QD]|[EN]|[WG]|[KD]|[RS]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RV[HA];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VP[WP]{[QV]|[N{I|L}]|[RA]|[KV]} 2.9881;1.9769;1.921;1.3357;1.2785;1.2276;1.2235;1.1526;0.99662;0.9304 -;-;-;-;-;-;-;-;-;- 1591 1 1.226 80968.3 1.0 9842 4883 14720 HBL1_DMSO_200M_050219_2,14727 HBL1_DMSO_200M_050219_2,14727,SFYKQPSL False False SILEDPPSI 77.549794 971.509020984173 20525110.0 14720.0 nc|ENSG00000064102|Q9NVM9-2|INTS13;;ENSG00000064102|ENST00000261191|INTS13 2.2255646387736 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14728 77.551 57.0 668210.0 25 0 79983.0 + 5913 DPYQGTIVL 9 71 503.2663392008687 1004.5181254685374 2 503.2671081423759 MULTI CID FTMS 0 0 0 14720 491035.625 0.6659196521466426 -2 0.196990966796875 8 Unmodified _DPYQGTIVL_ ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR 19.256988751693697 0.3154191944385105 4 [DP]Y{[QG]|[NA]}T{I|L}V{I|L} 9 0 [DP]Y{[QG]|[NA]}T{I|L} + + 16.198 6.6993 0.86515 1.6125 1.6125 44.378 0.0 0.0 0.0 0.0 -3.0532715756642475 -3.0532715756642475 0.0 0 0.0 0.0 0.0 0.0 + + [DP]Y{[QG]|[NA]}T{I|L}V{I|L} 1.6125 + + 22 + 1 1.226 37243.9 1.0 9843 4883 14720 HBL1_DMSO_200M_050219_2,14728 HBL1_DMSO_200M_050219_2,14728,DPYQGTIVL False True DPYQGTIVL 77.551219 503.267108142376 8246205.0 14720.0 ENSG00000116984|ENST00000366577|MTR;;nc|ENSG00000116984|Q99707-2|MTR 3.604533672332764 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14729 77.553 82.0 784830.0 25 0 72291.0 + 32275 RWPDYVREL 9 73 411.88402130637087 1232.6302345193126 3 411.8841735720634 MULTI CID FTMS 0 0 0 14720 473650.03125 0.4104693564908577 9 -0.9646835327148438 9 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 49.55428908609986 0.0413471690215031 4 [WR]PDY 5 4 42.988 0.0 0.0 3.4875 0.0 0.0 0.0 512.2840180488625 512.2840180488625 30.285371682087217 0.0 0.0 0.0 0 1.3182503180159344 1.5228787452803376 0.3494850021680094 0.6109243748081782 + [WR]PDY 3.4875 + + 132 1 1.226 56289.5 1.0 9844 4883 14720 HBL1_DMSO_200M_050219_2,14729 HBL1_DMSO_200M_050219_2,14729,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14730 77.555 62.0 747430.0 25 0 92216.0 + 18175 KTTPDVIFV 9 78 510.2929199854706 1018.5712870377412 2 510.2940551638603 MULTI CID FTMS 0 0 0 14720 465552.53125 0.340173133519695 3 -0.2978668212890625 10 Unmodified _KTTPDVIFV_ ENSG00000138326|ENST00000372360|RPS24;ENST00000465692.1_1_10:79795142-79808843:+|nuORF;ENST00000466129.5_1_10:79793659-79795541:+|nuORF;ENST00000478655.5_1_10:79793659-79797065:+|nuORF;ENST00000485708.6_1_10:79793659-79797725:+|nuORF;nc|ENSG00000138326|P62847-3|RPS24;nc|ENSG00000138326|P62847-4|RPS24;nc|ENSG00000138326|P62847|RPS24 9.38312468134398 0.5871240394367778 4 V{I|L}{M(Oxidation (M))|F}V 4 5 21.0 0.0 0.0 2.0617 0.0 0.0 542.2714100568375 0.0 542.2714100568375 0.0 7.50508444608478 0.0 0.0 0 0.718765315847925 0.0 0.0 0.0 + V{I|L}{M(Oxidation (M))|F}V 2.0617 + + 53 1 1.226 43193.7 1.0 9845 4883 14720 HBL1_DMSO_200M_050219_2,14730 HBL1_DMSO_200M_050219_2,14730,KTTPDVIFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14731 77.557 117.0 740000.0 25 0 79105.0 + 29451 QLIDIIHTA 9 127 512.2954281600879 1022.5763033869758 2 512.2958251833916 MULTI CID FTMS 0 0 0 14720 441964.1875 0.7992238356178009 -1 0.133453369140625 11 Unmodified _QLIDIIHTA_ ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 107.99703571036002 0.0067560930197464 4 [Q{I|L}]{I|L}D{I|L}{I|L}H[TA] 9 0 + 69.306 0.0 0.0 6.7775 6.7775 92.433 0.0 0.0 0.0 43.2748020939905 14.555431996201357 14.555431996201357 21.32006772473799 0 0.8274509799928715 2.0 2.249134866972623 0.0 + + [Q{I|L}]{I|L}D{I|L}{I|L}H[TA];[Q{I|L}]{I|L}D{I|L}[HA]T{I|L};[Q{I|L}]{I|L}[YV]{M(Oxidation (M))|F}Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}HTA{I|L}Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}H{I|L}TAQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}HT{I|L}AQ{I|L};[Q{I|L}]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}[Y{M(Oxidation (M))|F}]{I|L};[HT]A{I|L}{I|L}D{I|L}Q{I|L};[H{I|L}]{I|L}DTA{I|L}Q{I|L};[H{I|L}]{I|L}D{I|L}TAQ{I|L} 6.7775;4.6926;2.6678;2.5533;2.4759;2.2589;2.1608;1.6254;1.4532;1.3758 +;-;-;-;-;-;-;-;-;- + 680 + 1 1.226 73993.7 1.0 9846 4883 14720 HBL1_DMSO_200M_050219_2,14731 HBL1_DMSO_200M_050219_2,14731,QLIDIIHTA True True QLIDIIHTA 77.557035 512.295825183392 4857516.0 14720.0 ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 6.002273400624593 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14732 77.561 189.0 544560.0 25 0 69991.0 21615 LPKSLPLV 8 112 433.7890031493275 865.5634533654551 2 433.7893859744072 MULTI CID FTMS 0 0 0 14720 397471.4375 0.8164128490792839 4 -0.4639358520507812 12 Unmodified _LPKSLPLV_ ENSG00000137103|ENST00000643932|TMEM8B;ENST00000490199.2_1_9:35829798-35841141:+|nuORF 26.88365393820708 0.4786498634179528 4 VP 2 7 45.217 0.0 0.0 5.2239 0.0 0.0 0.0 666.421579297204 666.421579297204 11.827125221306645 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VP 5.2239 - 214 + 1 1.226 82867.2 1.0 9847 4883 14720 HBL1_DMSO_200M_050219_2,14732 HBL1_DMSO_200M_050219_2,14732,LPKSLPLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14733 77.563 136.0 493480.0 25 0 83530.0 + 1357 ALAAALAHI 9 99 425.7606862500451 849.5068195668903 2 425.7608215212822 MULTI CID FTMS 0 0 0 14720 365771.9375 1.0 0 0.0 13 Unmodified _ALAAALAHI_ ENSG00000107625|ENST00000373585|DDX50;ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21 67.41302359171755 0.0220989861905124 4 [{I|L}A]AAA{I|L}AH{I|L} 9 0 + 82.579 0.0 0.0 9.7209 9.7209 98.308 0.0 0.0 0.0 46.71565161354865 10.084406814122218 10.084406814122218 30.713337517843648 0 1.774227503252014 2.0 0.0 0.0 + + [{I|L}A]AAA{I|L}AH{I|L};[{I|L}A]{[NV]|[RG]}{I|L}AH{I|L};[{I|L}A]{I|L}{[NV]|[RG]}AH{I|L} 9.7209;6.1054;4.522 +;-;- + 364 + 1 1.226 55842.8 1.0 9848 4883 14720 HBL1_DMSO_200M_050219_2,14733 HBL1_DMSO_200M_050219_2,14733,ALAAALAHI True True ALAAALAHI 77.5634 425.760821521282 2349715.0 14720.0 ENSG00000107625|ENST00000373585|DDX50;;nc|ENSG00000165732|Q9NR30-2|DDX21;;ENSG00000165732|ENST00000354185|DDX21 6.090883572896321 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14734 77.573 533.0 634080.0 25 0 42033.0 + 26736 NYYPYTITEY 10 190 663.7979074213717 1325.5812619095434 2 663.7980834841728 MULTI CID FTMS 0 0 0 14720 351085.0625 0.0826112142847478 -3 0.2856216430664062 14 Unmodified _NYYPYTITEY_ ENSG00000154217|ENST00000581322|PITPNC1;nc|ENSG00000154217|Q9UKF7-2|PITPNC1 92.65332237495696 0.0091434457392194 4 [YN]YPYT{I|L} 7 3 48.919 0.0 0.0 3.6904 0.0 0.0 0.0 408.1367788375309 408.1367788375309 0.1895783635321706 0.0 0.0 0.0 0 1.1307196863200843 1.6989700043360187 0.805462187404089 0.2302046884880938 + [YN]YPYT{I|L} 3.6904 + + 11052 1 1.226 243870.2 1.0 9849 4883 14720 HBL1_DMSO_200M_050219_2,14734 HBL1_DMSO_200M_050219_2,14734,NYYPYTITEY True True NYYPYTITEY 77.572794 663.798083484173 112610844.0 14720.0 nc|ENSG00000154217|Q9UKF7-2|PITPNC1;;ENSG00000154217|ENST00000581322|PITPNC1 7.420829772949219 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14735 77.575 79.0 476230.0 25 0 50978.0 + -1 SIENAKMAL 9 79 496.75682093941055 991.4990889456212 2 496.7572509646416 MULTI CID FTMS 0 0 0 14720 351782.6875 1.0 0 0.0 15 Oxidation (M) _SIENAKM(Oxidation (M))AL_ REV__ENSG00000103449|ENST00000251020|SALL1;REV__nc|ENSG00000103449|Q9NSC2-2|SALL1 21.74664581756881 0.2544899275067181 4 A{I|L} 2 -1 16.454 0.0 0.0 1.6595 0.0 0.0 789.3677850899555 0.0 789.3677850899555 0.0 5.194590330151847 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L} 1.6595 + + 94 + 1 1.226 32543.7 1.0 9850 4883 14720 HBL1_DMSO_200M_050219_2,14735 HBL1_DMSO_200M_050219_2,14735,SIENAKMAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14736 77.578 184.0 359660.0 25 0 52853.0 + 14046 IALDAVKMV 9 100 480.2834222999006 958.5522916666011 2 480.2835876345634 MULTI CID FTMS 0 0 0 14720 288304.0625 0.7399688812563829 2 -0.2407150268554687 16 Unmodified _IALDAVKMV_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 24.020572477871973 0.2255576514309169 4 {I|L}A{I|L}DAVKMV 9 0 + 47.935 0.0 0.0 5.0008 5.0008 86.594 0.0 0.0 0.0 12.221478522535136 7.324930384796815 7.324930384796815 47.93481604037879 0 0.3935078169319297 1.6989700043360187 0.0 0.0 + + {I|L}A{I|L}DAVKMV 5.0008 + + 722 + 1 1.226 57060.1 1.0 9851 4883 14720 HBL1_DMSO_200M_050219_2,14736 HBL1_DMSO_200M_050219_2,14736,IALDAVKMV False True IALDAVKMV 77.578129 480.283587634563 3215961.5 14720.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 5.052984078725179 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14737 77.581 144.0 433230.0 25 0 37585.0 + 2375 AQMDYQLRL 9 85 569.2901083915804 1136.5656638499606 2 569.2899047732353 MULTI CID FTMS 0 0 0 14720 293733.71875 0.92669970830017 -1 0.133453369140625 17 Unmodified _AQMDYQLRL_ ENSG00000008382|ENST00000599840|MPND;nc|ENSG00000008382|Q8N594-2|MPND;nc|ENSG00000008382|Q8N594|MPND 27.628801355627647 0.1796483985696185 4 [QA]MDYQ{I|L}R{I|L} 9 0 + 64.536 0.0 0.0 5.6781 5.6781 84.372 0.0 0.0 0.0 51.040937697618745 10.457574905606748 10.457574905606748 9.208187539523747 0 0.5 1.0457574905606752 0.0 0.3494850021680094 + + [QA]MDYQ{I|L}R{I|L};[QA]MDY[AG]{I|L}R{I|L};[QA]MD{I|L}[YQ]R{I|L};[QA]{I|L}[MD][YQ]R{I|L};[QA]M[RK][KC]C(Carbamidomethyl (C)){I|L};[QA]M[RK][HM][HV] 5.6781;4.868;3.456;1.8063;1.5414;1.4808 +;-;-;-;-;- + 100 + 1 1.226 51414.8 1.0 9852 4883 14720 HBL1_DMSO_200M_050219_2,14737 HBL1_DMSO_200M_050219_2,14737,AQMDYQLRL False True AQMDYQLRL 77.581029 569.289904773235 2198684.25 14720.0 nc|ENSG00000008382|Q8N594-2|MPND;;nc|ENSG00000008382|Q8N594|MPND;;ENSG00000008382|ENST00000599840|MPND 7.038388729095459 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14738 77.585 231.0 385720.0 25 0 65021.0 37802 TLSLVPRLHW 10 102 611.3562878849376 1220.6980228366751 2 611.3550292849541 MULTI CID FTMS 0 0 0 14720 255292.515625 0.0992601116427106 11 -1.1643447875976562 18 Unmodified _TLSLVPRLHW_ ENSG00000149541|ENST00000265471|B3GAT3;ENST00000532585.5_1_11:62383175-62388587:-|nuORF;nc|ENSG00000149541|O94766-2|B3GAT3 3.2813086475875832 0.7114585191678878 4 {M(Oxidation (M))|F} 1 10 10.181 0.0 0.0 0.83404 0.0 0.0 1055.6191634390173 0.0 1055.6191634390173 0.0 1.1466838550445324 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.83404 - 16 + 1 1.226 67803.4 1.0 9853 4883 14720 HBL1_DMSO_200M_050219_2,14738 HBL1_DMSO_200M_050219_2,14738,TLSLVPRLHW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14739 77.589 188.0 414980.0 25 0 54443.0 + 6548 EALKIFQKI 9 106 363.8936578062501 1088.6591440189504 3 363.8933593630791 MULTI CID FTMS 0 0 0 14720 259739.71875 1.0 0 0.0 19 Unmodified _EALKIFQKI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 23.78978130925829 0.2284941198415988 4 K{I|L}{M(Oxidation (M))|F}QK{I|L} 6 3 32.644 0.0 0.0 2.9985 0.0 0.0 313.16228466058175 0.0 313.16228466058175 0.0 20.627188316129512 0.0 0.0 0 0.0 0.0 0.0 1.1989700043360187 + K{I|L}{M(Oxidation (M))|F}QK{I|L} 2.9985 + + 152 + 1 1.226 66974.1 1.0 9854 4883 14720 HBL1_DMSO_200M_050219_2,14739 HBL1_DMSO_200M_050219_2,14739,EALKIFQKI False True EALKIFQKI 77.589 363.8941 1758007.0 14720.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 1.8766246909896531 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14740 77.595 275.0 504270.0 25 0 74580.0 21976 LPPNVQII 8 131 447.2760921142962 892.5376312953924 2 447.2760803103447 MULTI CID FTMS 0 0 0 14720 255255.4375 0.7643343082879753 3 -0.2978668212890625 20 Unmodified _LPPNVQII_ ENSG00000100099|ENST00000398145|HPS4;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000496385.5_1_22:26849136-26861668:-|nuORF;nc|ENSG00000100099|Q9NQG7-2|HPS4;nc|ENSG00000100099|Q9NQG7-3|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4 59.79521254764295 0.1151759508933577 4 [{I|L}P]NPVQ{I|L}{I|L} 8 2 + 61.355 0.0 0.0 6.8742 6.8742 80.424 0.0 0.0 0.0 12.730012720637376 14.904630595263413 12.730012720637376 2.865320089195592 0 0.5 1.2218487496163564 0.0 0.9802046884880938 [{I|L}P]NPVQ{I|L}{I|L};[{I|L}P]NPN{I|L}{I|L}{I|L};[{I|L}P]NPV[AG]{I|L}{I|L};[{I|L}P]NNP{I|L}{I|L}{I|L};[{I|L}P]GGPVQ{I|L}{I|L};[{I|L}P]GGPN{I|L}{I|L}{I|L};[{I|L}P]NPGG{I|L}{I|L}{I|L};[NP]P{I|L}VQ{I|L}{I|L};[AG]VPPVQ{I|L}{I|L};[AG]VPPN{I|L}{I|L}{I|L} 6.8742;6.5531;5.8364;5.6063;5.5292;5.5154;5.5154;5.4479;5.2492;5.2354 -;-;-;-;-;-;-;-;-;- 764 1 1.226 111828.8 1.0 9855 4883 14720 HBL1_DMSO_200M_050219_2,14740 HBL1_DMSO_200M_050219_2,14740,LPPNVQII True True VPNPLQIL 77.595241 447.2771 7433864.5 14720.0 nc|ENSG00000160688|Q8NFF5-3|FLAD1;;ENSG00000160688|ENST00000292180|FLAD1;;nc|ENSG00000160688|Q8NFF5-2|FLAD1 0.7087393502394358 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14742 77.6 102.0 424940.0 25 0 72533.0 + 43394 WQRPQKRKR 9 63 641.8822995054525 1281.7500460777048 2 641.8826171755791 MULTI CID FTMS 0 0 0 14741 580304.125 0.7962941299968714 -3 0.2566375732421875 1 Unmodified _WQRPQKRKR_ REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF 2.059750862983233 0.8427793054688888 4 M 1 -1 11.783 0.0 0.0 0.91927 0.0 0.0 1132.698545688836 0.0 1132.698545688836 0.0 7.178642847807186 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.91927 - 5 + 1 1.226 38702.4 1.0 9856 4884 14741 HBL1_DMSO_200M_050219_2,14742 HBL1_DMSO_200M_050219_2,14742,WQRPQKRKR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14743 77.61 553.0 348600.0 25 0 22032.0 -1 0 131 994.4479022310828 1986.881251528965 2 994.449755847454 MULTI CID FTMS 0 0 0 14741 316110.5 0.8297320169113638 1 -0.1810684204101562 2 4 [YQ]{I|L}ENY[WE]NE{I|L} 11 -1 55.224 0.0 0.0 2.7794 0.0 0.0 0.0 502.23226073806967 502.23226073806967 2.060874661275641 0.0 0.0 0.0 0 0.0 0.958607314841775 1.0010912013506126 1.6989700043360187 [YQ]{I|L}ENY[WE]NE{I|L} 2.7794 - 6839 1 1.226 134102.0 1.0 9857 4884 14741 HBL1_DMSO_200M_050219_2,14743 HBL1_DMSO_200M_050219_2,14743, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14744 77.611 30.0 1334900.0 25 0 111810.0 + 35744 SVLDVGGAVTAV 12 88 544.303218976793 1086.591885020386 2 544.3038818240166 MULTI CID FTMS 0 0 0 14741 1212337.5 0.8897502989319547 -1 0.0596466064453125 3 Unmodified _SVIDQIDKAV_ nc|ENSG00000134759|Q6IA86-7|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;ENSG00000134759|ENST00000358232|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-2|ELP2 24.020572477871973 0.4289996903560794 4 [VS]{I|L}DVRR{[QD]|[EN]|[WG]|[KD]|[RS]} 9 5 + 37.381 0.0 0.0 3.4402 3.4402 80.14 0.0 0.0 0.0 20.000000000000004 0.4305997461732218 0.4305997461732218 24.557386138585805 0 0.0 2.0 0.4247425010840047 0.0 [VS]{I|L}DVRR{[QD]|[EN]|[WG]|[KD]|[RS]};[TA]{[QN]|[E{I|L}]|[KN]}VRR{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}RRV[EP]AV;{[TV]|[{I|L}S]}VDVRR{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}RRVD[PA]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[VS]VRR{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}RRV[EP]G{I|L};{[QN]|[E{I|L}]|[KN]}[TA]VRR{[QD]|[EN]|[WG]|[KD]|[RS]} 3.4402;1.1802;1.1605;1.0455;0.91823;0.83638;0.64119;0.061812 -;-;-;-;-;-;-;- 264 1 1.226 38916.9 1.0 9858 4884 14741 HBL1_DMSO_200M_050219_2,14744 HBL1_DMSO_200M_050219_2,14744,SVIDQIDKAV False False SVLDVGGAVTAV 77.610716 544.3057 13512125.0 14741.0 nc|ENSG00000134759|Q6IA86-7|ELP2;;nc|ENSG00000134759|Q6IA86-3|ELP2;;nc|ENSG00000134759|Q6IA86-5|ELP2;;ENSG00000134759|ENST00000358232|ELP2;;nc|ENSG00000134759|Q6IA86-6|ELP2;;nc|ENSG00000134759|Q6IA86-2|ELP2 7.379016399383545 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14745 77.612 31.0 1705900.0 25 0 119610.0 + 3325 AYLPVNESF 9 92 520.2595576448587 1038.5045623565172 2 520.2586547732353 MULTI CID FTMS 0 0 0 14741 918257.1875 0.7218722129130981 -2 0.1930999755859375 4 Unmodified _AYLPVNESF_ ENSG00000167658|ENST00000309311|EEF2 30.22481116460888 0.1466181017706357 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 3 6 28.952 0.0 0.0 2.7879 0.0 0.0 0.0 688.2961327513016 688.2961327513016 5.280287236002437 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 2.7879 + + 212 1 1.226 46957.0 1.0 9859 4884 14741 HBL1_DMSO_200M_050219_2,14745 HBL1_DMSO_200M_050219_2,14745,AYLPVNESF False True AYLPVNESF 77.611896 520.258654773235 13125047.0 14741.0 ENSG00000167658|ENST00000309311|EEF2 4.841123819351196 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14746 77.614 78.0 443770.0 25 0 56757.0 + + -1 YPYYGKLL 8 61 507.7691845671117 1013.5238162010236 2 508.7740661501884 MULTI CID FTMS 0 0 0 14741 205529.03125 1.0 0 0.0 5 Oxidation (M) _M(Oxidation (M))LYVNVFI_ nc|ENSG00000143153|P05026-2|ATP1B1;ENSG00000143153|ENST00000367815|ATP1B1 17.086550045450526 0.6584923310065985 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YV 4 -1 26.911 0.0 0.0 2.6552 0.0 0.0 0.0 488.2579219961985 488.2579219961985 4.515449934959719 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YV 2.6552 + + 91 1 1.226 34475.4 1.0 9860 4884 14741 HBL1_DMSO_200M_050219_2,14746 HBL1_DMSO_200M_050219_2,14746,MLYVNVFI False False YPYYGKLL 77.613681 508.774066150188 1015441.75 14741.0 nc|ENSG00000143153|P05026-2|ATP1B1;;ENSG00000143153|ENST00000367815|ATP1B1 1.4482596119244893 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14747 77.626 690.0 371330.0 25 0 27957.0 + 3698 DAFLASESL 9 127 952.4613958332212 951.4541193666212 1 952.4620849490166 MULTI CID FTMS 0 0 0 14741 224918.53125 0.3057373015078053 -2 0.1930999755859375 6 Unmodified _DAFLASESL_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 103.74828524460852 0.0090107942103208 4 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}ASTD{I|L} 9 2 + 84.471 0.0 0.0 8.8781 8.8781 94.662 0.0 0.0 0.0 13.319229002019496 47.281381439366186 13.319229002019496 10.568109453757655 0 1.6465912507003608 1.3979400086720375 1.798455006504028 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}ASTD{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}ASTEV;{[DA]|[EG]}{M(Oxidation (M))|F}A{I|L}STD{I|L};{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}ASTD{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}N{I|L};{M(Oxidation (M))|F}VTSA{I|L}[WE];{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}ASTVE;{M(Oxidation (M))|F}VTSA[WE]{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}[VG]{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}{I|L}GV 8.8781;7.7673;7.7211;7.6225;7.5666;7.3066;7.1743;6.8842;6.7661;6.6769 -;-;-;-;-;-;-;-;-;- 7845 1 1.226 167957.4 1.0 9861 4884 14741 HBL1_DMSO_200M_050219_2,14747 HBL1_DMSO_200M_050219_2,14747,DAFLASESL True True DAFLASESL 77.625689 952.462084949017 12725297.0 14741.0 ENST00000478340.2_1_6:35437033-35438524:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;;ENSG00000198755|ENST00000322203|RPL10A 7.447075525919597 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14748 77.633 396.0 394790.0 25 0 40745.0 + 1694 ALPHVVPTL 9 151 473.7894545921092 945.5643562510184 2 473.7898132205009 MULTI CID FTMS 0 0 0 14741 214541.96875 0.3293325623546739 -2 0.1930999755859375 7 Unmodified _ALPHVVPTL_ ENSG00000164818|ENST00000297440|DNAAF5;ENST00000491496.1_1_7:803580-810256:+|nuORF;nc|ENSG00000164818|Q86Y56-2|DNAAF5 106.8454739257335 0.0073671968602159 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVA{I|L}PT{I|L} 9 4 + 60.492 0.0 0.0 6.3975 6.3975 76.179 0.0 0.0 0.0 11.108923071974884 37.50373414770814 11.108923071974884 1.4612803567823818 0 0.7742275032520141 0.0 0.9896518287104438 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVA{I|L}PT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}APT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VA{I|L}VPT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VA{I|L}PVT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VAV{I|L}PT{I|L};[VP]HA{I|L}VPT{I|L};[VP]HVA{I|L}PT{I|L};[{I|L}A][YR]{I|L}PT{I|L};[VP]HV{I|L}APT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}A]VVPT{I|L} 6.3975;6.2429;6.232;5.2782;5.2393;5.1672;5.0683;5.0595;4.9138;4.8893 -;-;-;-;-;-;-;-;-;- 1166 1 1.226 120578.8 1.0 9862 4884 14741 HBL1_DMSO_200M_050219_2,14748 HBL1_DMSO_200M_050219_2,14748,ALPHVVPTL True True ALPHVVPTL 77.632766 473.789813220501 6525068.0 14741.0 nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENSG00000164818|ENST00000297440|DNAAF5;;ENST00000491496.1_1_7:803580-810256:+|nuORF 5.6157487233479815 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14749 77.645 716.0 136600.0 25 0 27535.0 7807 ELIKKLQYRY 10 157 677.3950612702711 1352.775569607342 2 677.3951904177666 MULTI CID FTMS 0 0 0 14741 204679.75 0.409728050381318 -9 0.8252410888671875 8 Unmodified _ELIKKLQYRY_ ENSG00000107263|ENST00000683357|RAPGEF1;nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1 3.2813086475875832 0.7114585191678878 4 {I|L} 1 9 10.278 0.0 0.0 0.75974 0.0 0.0 1221.6805053756998 0.0 1221.6805053756998 0.0 0.0965257759769322 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.75974 + + 242 + 1 1.226 82122.4 1.0 9863 4884 14741 HBL1_DMSO_200M_050219_2,14749 HBL1_DMSO_200M_050219_2,14749,ELIKKLQYRY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14750 77.649 206.0 393430.0 25 0 57050.0 + 22423 LPTFVRSI 8 106 466.78195425504936 0 466.7816345095634 PEAK CID FTMS 0 0 0 14741 196996.234375 0.4947809579155007 -3 0.2566375732421875 9 Unmodified _LPTFVRSI_ ENSG00000156515|ENST00000359426|HK1;ENST00000494253.1_1_10:71098016-71144300:+|nuORF;nc|ENSG00000156515|P19367-2|HK1;nc|ENSG00000156515|P19367-3|HK1;nc|ENSG00000156515|P19367-4|HK1 34.40172386719151 0.1907325408143214 4 PT{M(Oxidation (M))|F}V 4 4 19.795 0.0 0.0 2.1249 0.0 0.0 113.08331329487004 371.2057283990844 484.28904169395446 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + PT{M(Oxidation (M))|F}V 2.1249 + + 172 + 1 1.226 68430.9 1.0 9864 4884 14741 HBL1_DMSO_200M_050219_2,14750 HBL1_DMSO_200M_050219_2,14750,LPTFVRSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14751 77.663 800.0 366190.0 25 0 23818.0 + 41864 VPYPLPKI 8 180 463.78933281423656 925.5641126952733 2 463.7892944216728 MULTI CID FTMS 0 0 0 14741 167314.765625 0.0724904940443244 -7 0.6127243041992188 10 Unmodified _VPYPLPKI_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1 53.57557251787612 0.1224291679108181 4 VPYP{I|L}PK{I|L} 8 0 + 78.019 0.0 0.0 8.4293 8.4293 89.896 0.0 0.0 0.0 41.216849892629455 12.245462655597107 12.245462655597107 7.0732594320775775 0 1.4142365192717878 1.3979400086720375 0.0 0.0 + + VPYP{I|L}PK{I|L};VPY{I|L}PPK{I|L};VPYP{I|L}{I|L}KP;V{I|L}{M(Oxidation (M))|F}P{I|L}PK{I|L};VPY{I|L}P{I|L}KP;V{I|L}{M(Oxidation (M))|F}{I|L}PPK{I|L};V{I|L}{M(Oxidation (M))|F}P{I|L}{I|L}KP;V{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}KP;VAQ{[SA]|[TG]}{I|L}PK{I|L};V{I|L}[TA]{[QG]|[NA]}PK{I|L} 8.4293;7.6651;6.9013;6.6007;6.1371;5.8365;5.0727;4.3085;3.851;3.5418 +;-;-;-;-;-;-;-;-;- + 775 + 1 1.226 223107.8 0.800000011920929 9865 4884 14741 HBL1_DMSO_200M_050219_2,14751 HBL1_DMSO_200M_050219_2,14751,VPYPLPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14752 77.67 337.0 422650.0 25 0 43200.0 + 8919 FAITAIKGV 9 139 460.2841656268956 918.5537783205912 2 460.2841979861259 MULTI CID FTMS 0 0 0 14741 159723.453125 0.8664896724456939 -1 0.0596466064453125 11 Unmodified _FAITAIKGV_ ENSG00000231500|ENST00000439602|RPS18;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000495909.2_1_5:90650295-90650631:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 54.773552608820026 0.0299037012502309 4 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}TA{I|L}KGV 9 0 + 55.495 0.0 0.0 6.0416 6.0416 79.382 0.0 0.0 0.0 6.017881691010132 3.912066260130693 3.912066260130693 3.912066260130693 0 0.6861818737241735 0.0 0.3494850021680094 1.0114393726401687 + + {[MS]|[{M(Oxidation (M))|F}A]}{I|L}TA{I|L}KGV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}TA{I|L}KVG 6.0416;5.6157 +;- + 518 + 1 1.226 112467.8 1.0 9866 4884 14741 HBL1_DMSO_200M_050219_2,14752 HBL1_DMSO_200M_050219_2,14752,FAITAIKGV True True FAITAIKGV 77.670201 460.284197986126 1749032.75 14741.0 ENST00000496813.5_1_6:33239896-33244045:+|nuORF;;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;;ENST00000495909.2_1_5:90650295-90650631:+|nuORF;;ENSG00000231500|ENST00000439602|RPS18 4.056911945343018 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14753 77.684 800.0 268170.0 25 0 27311.0 38774 TVDFYFEEV 9 212 574.7589706427858 1147.5033883523715 2 574.7595092654228 MULTI CID FTMS 0 0 0 14741 155577.53125 0.3342141017876981 30 -3.2137908935546875 12 Unmodified _TVDFYFEEV_ ENSG00000196353|ENST00000429747|CPNE4;nc|ENSG00000196353|Q96A23-2|CPNE4 21.74664581756881 0.2544899275067181 4 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VW 6 6 40.992 0.0 0.0 3.5722 0.0 0.0 0.0 413.0955599420532 413.0955599420532 21.01219677964764 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VW 3.5722 - 2519 + 1 1.226 161972.5 0.7900000214576721 9867 4884 14741 HBL1_DMSO_200M_050219_2,14753 HBL1_DMSO_200M_050219_2,14753,TVDFYFEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14754 77.698 800.0 213530.0 25 0 18432.0 31995 RVHARPVRFQ 10 160 422.5818806501653 0 422.5820800662041 PEAK CID FTMS 0 0 0 14741 135949.8125 0.581183322350854 -3 0.2566375732421875 13 Unmodified _RVHARPVRFQ_ ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN 3.5964929083625545 0.3961065659209837 4 AKD 3 9 14.041 0.0 0.0 1.6653 0.0 0.0 112.73584712369195 413.2310274713501 525.966874595042 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 AKD 1.6653 - 19 + 1 1.226 143594.8 0.6100000143051147 9868 4884 14741 HBL1_DMSO_200M_050219_2,14754 HBL1_DMSO_200M_050219_2,14754,RVHARPVRFQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14755 77.704 285.0 250710.0 25 0 28517.0 + 27867 PLRSPEPL 8 106 454.7634286607724 907.5123043883448 2 454.7638427615166 MULTI CID FTMS 0 0 0 14741 132138.765625 1.0 0 0.0 14 Unmodified _PLRSPEPL_ REV__ENST00000535739.5_1_12:6493425-6494510:+|nuORF 18.13498045792455 0.6430038125133779 4 S{M(Oxidation (M))|F}{I|L} 3 -1 32.976 0.0 0.0 3.6337 0.0 0.0 542.3188343732437 0.0 542.3188343732437 0.0 22.97614693140829 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 S{M(Oxidation (M))|F}{I|L} 3.6337 - 122 1 1.226 59706.3 1.0 9869 4884 14741 HBL1_DMSO_200M_050219_2,14755 HBL1_DMSO_200M_050219_2,14755,PLRSPEPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14756 77.718 800.0 185170.0 25 0 11660.0 -1 0 117 933.9453515534632 1865.8761501737265 2 934.4483520388604 MULTI CID FTMS 0 0 0 14741 123007.578125 0.9743351766424464 2 -0.23822021484375 15 4 [TA]{I|L}D{I|L}C(Carbamidomethyl (C))E 7 -1 44.19 0.0 0.0 2.3683 0.0 0.0 0.0 1060.4948570295594 1060.4948570295594 18.246061176019403 0.0 0.0 0.0 0 0.0 1.154901959985743 1.4436726795685342 0.0 [TA]{I|L}D{I|L}C(Carbamidomethyl (C))E 2.3683 - 4122 1 1.226 101221.0 0.5799999833106995 9870 4884 14741 HBL1_DMSO_200M_050219_2,14756 HBL1_DMSO_200M_050219_2,14756, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14757 77.722 191.0 350050.0 25 0 38458.0 + 37661 TLMAEMHVV 9 121 515.7543466344052 1029.4941403356104 2 515.7573119997978 MULTI CID FTMS 0 0 0 14741 139163.53125 0.0367674892465881 9 -0.958740234375 16 Unmodified _TLMAEMHVV_ ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF 23.1484247019978 0.2366544122328345 4 [{I|L}T]M 3 6 34.705 0.0 0.0 3.3711 0.0 0.0 0.0 681.3053755763225 681.3053755763225 14.124087660102798 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}T]M 3.3711 + + 353 + 1 1.226 54983.4 1.0 9871 4884 14741 HBL1_DMSO_200M_050219_2,14757 HBL1_DMSO_200M_050219_2,14757,TLMAEMHVV False True TLMAEMHVV 77.721786 515.757311999798 32315034.0 14741.0 nc|ENSG00000171634|Q12830|BPTF;;ENSG00000171634|ENST00000306378|BPTF;;nc|ENSG00000171634|Q12830-4|BPTF 6.596834500630696 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14758 77.736 800.0 142480.0 25 0 10109.0 -1 0 99 811.4011533284703 3241.575507447481 4 811.9045898318291 MULTI CID FTMS 0 0 0 14741 120226.203125 1.0 0 0.0 17 4 [Q{I|L}]{I|L}AVVA 7 -1 26.955 0.0 0.0 0.83154 0.0 0.0 0.0 2544.114544883281 2544.114544883281 10.528419686577802 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [Q{I|L}]{I|L}AVVA 0.83154 - 3107 1 1.226 87313.4 0.6000000238418579 9872 4884 14741 HBL1_DMSO_200M_050219_2,14758 HBL1_DMSO_200M_050219_2,14758, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14759 77.748 672.0 224850.0 25 0 18301.0 3159 AVSPLWNI 8 180 450.25231023312256 898.4900675330451 2 450.2527343630791 MULTI CID FTMS 0 0 0 14741 104762.734375 0.5732810158289778 1 -0.1810684204101562 18 Unmodified _AVSPLWNI_ ENST00000261735.3_1_12:112460511-112460547:+|nuORF 15.768221252438446 0.6779680726941459 4 T{I|L} 2 7 23.001 0.0 0.0 2.56 0.0 0.0 666.3466024224967 0.0 666.3466024224967 0.0 9.902059789059898 0.0 0.0 0 0.5 0.0 0.1803115997617927 0.0 T{I|L} 2.56 - 196 + 1 1.226 116553.9 1.0 9873 4884 14741 HBL1_DMSO_200M_050219_2,14759 HBL1_DMSO_200M_050219_2,14759,AVSPLWNI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14760 77.762 800.0 59331.0 25 0 2339.7 -1 0 96 890.419297530677 1778.824042128154 2 890.4213134646416 MULTI CID FTMS 0 0 0 14741 112877.4765625 1.0 0 0.0 19 4 {[VA]|[{I|L}G]}V 3 -1 22.676 0.0 0.0 1.2748 0.0 0.0 0.0 1506.6268429916884 1506.6268429916884 7.23579015671109 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[VA]|[{I|L}G]}V 1.2748 - 43 1 1.226 36616.8 0.5299999713897705 9874 4884 14741 HBL1_DMSO_200M_050219_2,14760 HBL1_DMSO_200M_050219_2,14760, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14761 77.776 800.0 127900.0 25 0 8893.2 + 16484 KALDEPPYLTV 11 148 623.3393960830633 1244.6642392329263 2 623.3409911990166 MULTI CID FTMS 0 0 0 14741 102951.453125 0.8585920048266451 6 -0.637451171875 20 Unmodified _KALDEPPYLTV_ ENSG00000054267|ENST00000264183|ARID4B;ENST00000466653.1_1_1:235392530-235490234:-|nuORF;ENST00000491632.5_1_1:235341091-235490234:-|nuORF;nc|ENSG00000054267|Q4LE39-2|ARID4B;nc|ENSG00000054267|Q4LE39-3|ARID4B 30.7034409873982 0.3712764582118616 4 {[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}VP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TV 11 4 + 45.997 0.0 0.0 3.6955 3.6955 69.19 0.0 0.0 0.0 3.4661504774715226 8.602053347907187 3.4661504774715226 3.1559803165893854 0 1.1237125054200234 1.5228787452803376 1.3343105420796064 0.0 {[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}VP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TV;{[QN]|[E{I|L}]|[KN]}[KG]EP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TV;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TV;[{I|L}T]{[NV]|[RG]}EP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TV;{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}VPH[HV]TV;{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}EP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TV;{NN|[MP]|[D{I|L}]|[EV]}[QT]VP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}TV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[Y{I|L}]YV;{[QN]|[E{I|L}]|[KN]}[KG]EPH[HV]TV;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VPH[HV]TV 3.6955;3.4419;3.417;3.2948;3.1923;3.1635;3.0298;3.0044;2.9388;2.9138 -;-;-;-;-;-;-;-;-;- 1798 1 1.226 75978.0 0.5600000023841858 9875 4884 14741 HBL1_DMSO_200M_050219_2,14761 HBL1_DMSO_200M_050219_2,14761,KALDEPPYLTV False True KALDEPPYLTV 77.776149 623.340991199017 1085883.125 14741.0 ENST00000466653.1_1_1:235392530-235490234:-|nuORF;;ENST00000491632.5_1_1:235341091-235490234:-|nuORF;;nc|ENSG00000054267|Q4LE39-2|ARID4B;;ENSG00000054267|ENST00000264183|ARID4B;;nc|ENSG00000054267|Q4LE39-3|ARID4B 5.853320280710856 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14763 77.781 9.4 5370900.0 25 0 671070.0 + 15643 IQIMKVEEI 9 85 551.8123501436302 1101.6101473540602 2 551.8130370974541 MULTI CID FTMS 0 0 0 14762 1922130.625 0.0725993102023426 3 -0.2762069702148437 1 Unmodified _IQIMKVEEI_ ENSG00000105640|ENST00000222247|RPL18A;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 30.63653989081413 0.1413794767160703 4 {[QN]|[E{I|L}]|[KN]}D 3 7 20.463 0.0 0.0 1.8575 0.0 0.0 0.0 741.4360195066571 741.4360195066571 -0.4402281476391998 0.0 -0.4402281476391998 0.0 0 0.0 1.0969100130080565 0.3807196863200844 0.0 {[QN]|[E{I|L}]|[KN]}D 1.8575 - 187 1 1.239 45083.7 1.0 9876 4885 14762 HBL1_DMSO_200M_050219_2,14763 HBL1_DMSO_200M_050219_2,14763,IQIMKVEEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14764 77.782 15.0 4059500.0 25 0 432330.0 15528 IPVLANFIV 9 72 493.30756668585485 984.6005804385096 2 493.3081542849541 MULTI CID FTMS 0 0 0 14762 3047711.5 0.5099480232121936 21 -2.2242431640625 2 Unmodified _IPVLANFIV_ ENSG00000146085|ENST00000274813|MMUT 26.88365393820708 0.1891292719743517 4 [KP]VSVP{I|L}{M(Oxidation (M))|F}V 9 6 + 55.882 0.0 0.0 5.6756 5.6756 81.765 0.0 0.0 0.0 3.979400086720375 31.418271902055324 3.979400086720375 7.2184874961635614 0 0.8252574989159953 0.0 0.3807196863200844 0.0 [KP]VSVP{I|L}{M(Oxidation (M))|F}V;[KP]VSV{M(Oxidation (M))|F}P{I|L}V;[KP]VSVP{M(Oxidation (M))|F}{I|L}V;[KP]VP[VS]{I|L}{M(Oxidation (M))|F}V;[KP]PV[VS]{I|L}{M(Oxidation (M))|F}V;[KP]VP[VS]{M(Oxidation (M))|F}{I|L}V;[KP]PV[VS]{M(Oxidation (M))|F}{I|L}V;[KP]VPA[YV]{I|L}V;[KP]PVA[YV]{I|L}V 5.6756;4.9425;4.9425;3.0788;2.7731;2.3457;2.0399;1.8611;1.5554 -;-;-;-;-;-;-;-;- 305 1 1.239 50392.4 1.0 9877 4885 14762 HBL1_DMSO_200M_050219_2,14764 HBL1_DMSO_200M_050219_2,14764,IPVLANFIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14765 77.783 29.0 2220000.0 25 0 603810.0 + 3287 AYHGLTVPL 9 79 485.7719108188399 969.5292687044798 2 485.7719604372978 MULTI CID FTMS 0 0 0 14762 1712079.625 0.8051496258897177 1 -0.0571517944335937 3 Unmodified _AYHGLTVPL_ ENSG00000113732|ENST00000519374|ATP6V0E1 40.44857923139169 0.0729940656229577 4 {[WN]|[YH]}AG{I|L}TVP{I|L} 9 2 + 49.676 0.0 0.0 5.1237 5.1237 78.178 0.0 0.0 0.0 5.642492736872597 29.933991468471945 5.642492736872597 6.020599913279625 0 0.6822333069283655 0.0 1.0 0.0 {[WN]|[YH]}AG{I|L}TVP{I|L};{[WN]|[YH]}AVATVP{I|L};{[WN]|[YH]}Q{I|L}TVP{I|L};{[WN]|[YH]}GA{I|L}TVP{I|L};{[HG]|PP}{I|L}YATVP{I|L};{[HG]|PP}YA{I|L}TVP{I|L};{[WN]|[YH]}G{I|L}ATVP{I|L};{[HG]|PP}Y{I|L}ATVP{I|L};{[HG]|PP}{I|L}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L};{[TV]|[{I|L}S]}[HA]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L} 5.1237;4.5027;4.4555;4.252;4.0106;3.7599;3.6311;3.1389;2.5982;2.5982 -;-;-;-;-;-;-;-;-;- 461 1 1.239 57536.7 1.0 9878 4885 14762 HBL1_DMSO_200M_050219_2,14765 HBL1_DMSO_200M_050219_2,14765,AYHGLTVPL True True AYHGLTVPL 77.783207 485.771960437298 65587218.0 14762.0 ENSG00000113732|ENST00000519374|ATP6V0E1 4.403229077657064 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14766 77.784 25.0 2408900.0 25 0 173300.0 + 13625 HPPSHWPLI 9 84 542.2906042372043 1082.5666555412083 2 542.2913696169853 MULTI CID FTMS 0 0 0 14762 1622180.375 0.2756447726476602 -8 0.793792724609375 4 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 67.34385681178166 0.0221257235307089 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L} 9 2 + 52.616 0.0 0.0 4.8603 4.8603 74.665 0.0 0.0 0.0 4.011459692238688 8.193540224208107 4.011459692238688 4.011459692238688 0 1.798455006504028 0.0 0.6549471895720984 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPPH{I|L}{I|L} 4.8603;4.4898;4.4639;4.0231;3.7498;3.4011;2.9604 -;-;-;-;-;-;- 484 1 1.239 49764.3 1.0 9879 4885 14762 HBL1_DMSO_200M_050219_2,14766 HBL1_DMSO_200M_050219_2,14766,HPPSHWPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14767 77.786 67.0 1136000.0 25 0 207020.0 + 30630 RFLDKALEL 9 89 368.885321212451 1103.634134237553 3 368.8852722048759 MULTI CID FTMS 0 0 0 14762 851050.8125 1.0 0 0.0 5 Unmodified _RFLDKALEL_ ENSG00000135069|ENST00000376588|PSAT1 26.268140514670165 0.1969607489560049 4 [R{M(Oxidation (M))|F}]{I|L}DKA{I|L}E{I|L} 9 0 + 39.007 0.0 0.0 3.5344 3.5344 63.064 0.0 0.0 0.0 9.889917747712651 23.522365671817205 9.889917747712651 0.3566687589218276 0 0.3182503180159344 0.0 0.5 0.2742275032520141 + + [R{M(Oxidation (M))|F}]{I|L}DKA{I|L}E{I|L};[R{M(Oxidation (M))|F}]{I|L}DKAE{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}DKEA{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}WWA{I|L}{I|L} 3.5344;3.5021;3.4339;0.65097 +;-;-;- + 216 1 1.239 64748.7 1.0 9880 4885 14762 HBL1_DMSO_200M_050219_2,14767 HBL1_DMSO_200M_050219_2,14767,RFLDKALEL False True RFLDKALEL 77.78599 368.885272204876 14070480.0 14762.0 ENSG00000135069|ENST00000376588|PSAT1 4.832054456075032 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14768 77.787 60.0 1229200.0 25 0 263930.0 + 32267 RWPDYVREL 9 64 617.3224849501827 1232.6304169671653 2 617.3234130740166 MULTI CID FTMS 0 0 0 14762 625585.5 0.2444636119925545 8 -0.7776718139648438 6 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 22.65808497894818 0.2428932432760099 4 RW[DP]{I|L} 5 4 42.676 0.0 0.0 3.4622 0.0 0.0 0.0 562.2650240533811 562.2650240533811 21.706962271689747 0.0 0.0 0.0 0 1.3494850021680094 1.5228787452803376 0.0 0.0 RW[DP]{I|L} 3.4622 - 68 + 1 1.239 60554.4 1.0 9881 4885 14762 HBL1_DMSO_200M_050219_2,14768 HBL1_DMSO_200M_050219_2,14768,RWPDYVREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14769 77.789 51.0 1246700.0 25 0 129380.0 + 10198 FQGVEFHYV 9 100 563.2730616087349 1124.5315702842695 2 563.2731201052666 MULTI CID FTMS 0 0 0 14762 413952.65625 0.931748312525331 -1 0.1810684204101562 7 Unmodified _FQGVEFHYV_ ENSG00000143815|ENST00000272163|LBR 28.486842064014134 0.1687311288560894 4 M{M(Oxidation (M))|F}T{M(Oxidation (M))|F} 4 8 26.887 0.0 0.0 2.3909 0.0 0.0 0.0 595.3219698541624 595.3219698541624 6.930481903659565 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 M{M(Oxidation (M))|F}T{M(Oxidation (M))|F} 2.3909 - 307 + 1 1.239 54494.9 1.0 9882 4885 14762 HBL1_DMSO_200M_050219_2,14769 HBL1_DMSO_200M_050219_2,14769,FQGVEFHYV False True FQGVEFHYV 77.788842 563.273120105267 3344945.5 14762.0 ENSG00000143815|ENST00000272163|LBR 5.592329819997151 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14770 77.791 82.0 771840.0 25 0 107950.0 + 18198 KVAELFEKL 9 99 538.8212401588827 1075.6279273845653 2 538.8218871951103 MULTI CID FTMS 0 0 0 14762 392718.53125 0.1073620176463717 2 -0.2232208251953125 8 Unmodified _KVAELFEKL_ ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF;ENST00000547000.1_1_12:101462478-101462640:+|nuORF 35.995811192298525 0.0974376724572558 4 KVAE{I|L}{M(Oxidation (M))|F}EK{I|L} 9 0 + 70.169 0.0 0.0 6.5236 6.5236 91.521 0.0 0.0 0.0 58.74945265860373 12.983324797206272 12.983324797206272 21.90659295050636 0 1.5 0.958607314841775 0.0 0.0 + + KVAE{I|L}{M(Oxidation (M))|F}EK{I|L};KVAE{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}S{I|L};KVAE{I|L}{M(Oxidation (M))|F}[TA]VV;KVAE{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}TV 6.5236;4.4869;4.2972;4.0712 +;-;-;- + 148 + 1 1.239 55633.0 1.0 9883 4885 14762 HBL1_DMSO_200M_050219_2,14770 HBL1_DMSO_200M_050219_2,14770,KVAELFEKL True True KVAELFEKL 77.790703 538.82188719511 50543480.0 14762.0 ENST00000490175.5_1_20:17923003-17949420:-|nuORF;;ENST00000547000.1_1_12:101462478-101462640:+|nuORF;;ENSG00000089006|ENST00000377759|SNX5 6.210914134979248 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14771 77.793 112.0 641040.0 25 0 85921.0 + 7338 LAFESIQKI 9 104 524.3002278712416 1046.5859028092832 2 524.8063232302666 MULTI CID FTMS 0 0 0 14762 390758.34375 0.691968522081094 -6 0.6304168701171875 9 Unmodified _EFRNIQKL_ nc|ENSG00000008838|O75448-2|MED24;ENSG00000008838|ENST00000394128|MED24 24.67388899826682 0.525179942228231 4 A{M(Oxidation (M))|F}ES{I|L}QK{I|L} 8 3 61.381 0.0 0.0 5.8649 0.0 0.0 112.07761531103944 0.0 112.07761531103944 0.0 45.97512626456671 0.0 0.0 0 0.0 0.0 1.174742501084005 0.6171302707394362 A{M(Oxidation (M))|F}ES{I|L}QK{I|L} 5.8649 - 551 + 1 1.239 61131.9 1.0 9884 4885 14762 HBL1_DMSO_200M_050219_2,14771 HBL1_DMSO_200M_050219_2,14771,EFRNIQKL False False LAFESIQKI 77.793073 524.806323230267 4030265.25 14762.0 nc|ENSG00000008838|O75448-2|MED24;;ENSG00000008838|ENST00000394128|MED24 5.085337479909261 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14772 77.796 142.0 676930.0 25 0 95244.0 + 2987 AVIGDVIRV 9 86 471.2925794486314 940.5706059640628 2 471.2930480837822 MULTI CID FTMS 0 0 0 14762 391348.65625 0.0397228270214405 -3 0.3741683959960937 10 Unmodified _AVIGDVIRV_ ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21 34.40172386719151 0.1061884637610825 4 {[VA]|[{I|L}G]}{I|L}GDV{I|L}RV 9 0 + 67.617 0.0 0.0 7.1889 7.1889 81.919 0.0 0.0 0.0 27.147642715192504 9.719712763997563 9.719712763997563 3.0102999566398125 0 0.7742275032520141 2.0 0.0 0.2742275032520141 + + {[VA]|[{I|L}G]}{I|L}GDV{I|L}RV;{[VA]|[{I|L}G]}{I|L}GVD{I|L}RV;{[VA]|[{I|L}G]}{I|L}VGD{I|L}RV;{[VA]|[{I|L}G]}VADV{I|L}RV;{[VA]|[{I|L}G]}VAVD{I|L}RV;{[VA]|[{I|L}G]}{I|L}GDV[RV]{I|L};{[VA]|[{I|L}G]}V{I|L}GD{I|L}RV;{[VA]|[{I|L}G]}{I|L}GVD[RV]{I|L};{[VA]|[{I|L}G]}{I|L}VGD[RV]{I|L};{[VA]|[{I|L}G]}VADV[RV]{I|L} 7.1889;6.8689;6.5488;6.4973;6.1773;6.1555;5.8572;5.8355;5.5154;5.4639 +;-;-;-;-;-;-;-;-;- + 236 + 1 1.239 77615.9 1.0 9885 4885 14762 HBL1_DMSO_200M_050219_2,14772 HBL1_DMSO_200M_050219_2,14772,AVIGDVIRV True True AVIGDVIRV 77.795921 471.293048083782 205843512.0 14762.0 nc|ENSG00000165732|Q9NR30-2|DDX21;;ENSG00000165732|ENST00000354185|DDX21 5.357635895411174 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14773 77.799 135.0 560260.0 25 0 38094.0 + 30712 RGFEGSFEEL 10 84 585.7752408293442 1169.5359287254882 2 585.7756225466728 MULTI CID FTMS 0 0 0 14762 389986.9375 0.8663133729805302 -1 0.1810684204101562 11 Unmodified _RGFEGSFEEL_ ENSG00000151726|ENST00000281455|ACSL1;ENST00000513001.5_1_4:185678281-185679089:-|nuORF;nc|ENSG00000151726|P33121-2|ACSL1;nc|ENSG00000151726|P33121-3|ACSL1 37.07464296494664 0.1884581770199685 4 EGS{M(Oxidation (M))|F}EE{I|L} 7 3 63.219 0.0 0.0 5.4055 0.0 0.0 360.19136244941564 0.0 360.19136244941564 0.0 45.93465481078725 0.0 0.0 0 0.6747425010840047 0.0 0.75 0.0 + EGS{M(Oxidation (M))|F}EE{I|L} 5.4055 + + 433 1 1.239 61249.2 1.0 9886 4885 14762 HBL1_DMSO_200M_050219_2,14773 HBL1_DMSO_200M_050219_2,14773,RGFEGSFEEL False True RGFEGSFEEL 77.798667 585.775622546673 3467106.25 14762.0 ENST00000513001.5_1_4:185678281-185679089:-|nuORF;;ENSG00000151726|ENST00000281455|ACSL1;;nc|ENSG00000151726|P33121-2|ACSL1;;nc|ENSG00000151726|P33121-3|ACSL1 7.628424008687337 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14774 77.802 143.0 420520.0 25 0 70776.0 33518 SILARLVL 8 74 442.79977757158326 883.5850022099665 2 442.8000671267509 MULTI CID FTMS 0 0 0 14762 384838.6875 0.0347285648473603 4 -0.4098358154296875 12 Unmodified _SILARLVL_ AluSg_dup36345|chr22:39033812-39034106:-|1.7183411907320236|0.3290854125150665|2.38|48.0|14|1|anti-sense 34.10243960390752 0.3329570729325616 4 TV{I|L} 3 6 34.425 0.0 0.0 3.896 0.0 0.0 552.3749256818375 0.0 552.3749256818375 0.0 14.006375246153908 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 TV{I|L} 3.896 - 59 1 1.239 52061.1 1.0 9887 4885 14762 HBL1_DMSO_200M_050219_2,14774 HBL1_DMSO_200M_050219_2,14774,SILARLVL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 14775 77.803 52.0 1003300.0 25 0 182810.0 + 27378 PIEEYHRI 8 75 528.7763169965993 0 528.7769042849541 PEAK CID FTMS 0 0 0 14762 372879.3125 0.5555407706898365 -1 0.1810684204101562 13 Unmodified _PIEEYHRI_ REV__ENSG00000180263|ENST00000343958|FGD6;REV__nc|ENSG00000180263|Q6ZV73-2|FGD6 10.183394434864962 0.5394990767616434 4 {I|L}EE{I|L}E 5 -1 13.672 0.0 0.0 1.2953 0.0 0.0 230.1619346750361 209.0571230524047 439.2190577274408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}EE{I|L}E 1.2953 - 121 + 1 1.239 47194.3 1.0 9888 4885 14762 HBL1_DMSO_200M_050219_2,14775 HBL1_DMSO_200M_050219_2,14775,PIEEYHRI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14776 77.805 103.0 868760.0 25 0 61495.0 + 17233 KLLKDLPEL 9 126 534.8370261135019 1067.6594992938035 2 534.8371459841728 MULTI CID FTMS 0 0 0 14762 366509.6875 0.3215770524644796 -2 0.2407150268554687 14 Unmodified _KLLKDLPEL_ ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4 51.487983226225225 0.0371074584807926 4 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}KEP{I|L} 9 5 + 56.856 0.0 0.0 5.3253 5.3253 72.012 0.0 0.0 0.0 0.4043732214315554 35.9407801856257 0.4043732214315554 1.5498302464688931 0 0.5 0.8860566476931632 0.0 0.7302046884880937 {NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}KEP{I|L};[K{I|L}]{I|L}D{I|L}KEP{I|L};[K{I|L}]D{I|L}{I|L}KEP{I|L};{[TV]|[{I|L}S]}[VG]{I|L}{I|L}KEP{I|L};[K{I|L}]{I|L}K{NN|[MP]|[D{I|L}]|[EV]}EP{I|L};[{I|L}T]AA{I|L}{I|L}KEP{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}[EP]K{I|L};[K{I|L}]{I|L}D{I|L}[EP]K{I|L};[K{I|L}]D{I|L}{I|L}[EP]K{I|L};[K{I|L}]{I|L}TV[VG]EP{I|L} 5.3253;5.1801;5.1765;4.4537;3.4239;3.1435;2.6497;2.5045;2.5009;2.1772 -;-;-;-;-;-;-;-;-;- 1030 1 1.239 74039.1 1.0 9889 4885 14762 HBL1_DMSO_200M_050219_2,14776 HBL1_DMSO_200M_050219_2,14776,KLLKDLPEL True True KLLKDLPEL 77.805105 534.8377 14088139.0 14762.0 ENST00000489049.5_1_10:112647518-112650449:+|nuORF;;nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 0.3070863385995229 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14777 77.808 139.0 464610.0 25 0 48222.0 + 28537 PTPHVDPTI 9 96 488.759583208201 975.504613483202 2 488.7600280642509 MULTI CID FTMS 0 0 0 14762 307110.53125 0.1297654746941177 4 -0.4098358154296875 15 Unmodified _PTPHVDPTI_ ENST00000476089.1_1_2:182321937-182323202:+|nuORF 28.486842064014134 0.1687311288560894 4 PT{I|L} 3 6 29.724 0.0 0.0 3.047 0.0 0.0 646.3092542029432 0.0 646.3092542029432 0.0 2.544321917401078 0.0 0.0 0 0.5 0.0 0.6307196863200843 0.0 + PT{I|L} 3.047 + + 132 + 1 1.239 56434.9 1.0 9890 4885 14762 HBL1_DMSO_200M_050219_2,14777 HBL1_DMSO_200M_050219_2,14777,PTPHVDPTI False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14778 77.812 198.0 323260.0 25 0 55349.0 + 15639 IQIMKVEEI 9 98 559.8118982685821 1117.6092436039642 2 559.8109008669853 MULTI CID FTMS 0 0 0 14762 293076.875 0.3136594009258819 2 -0.2232208251953125 16 Oxidation (M) _IQIM(Oxidation (M))KVEEI_ ENSG00000105640|ENST00000222247|RPL18A;ENST00000401937.3_1_1:33445851-33446070:+|nuORF 51.629811660486645 0.0367964933207742 4 [Q{I|L}]{M(Oxidation (M))|F}VEE[Q{I|L}]{I|L} 9 4 + 70.031 0.0 0.0 6.2662 6.2662 86.678 0.0 0.0 0.0 20.857792609959205 41.250364437275216 20.857792609959205 9.208187539523747 0 1.1549471895720984 1.0457574905606752 0.2887254899964357 0.3252574989159953 [Q{I|L}]{M(Oxidation (M))|F}VEE[Q{I|L}]{I|L};[Q{I|L}]{M(Oxidation (M))|F}VE[VP]{[CA]|SS}{I|L};[Q{I|L}]{M(Oxidation (M))|F}V[DP]{I|L}{[CA]|SS}{I|L};[Q{I|L}]{M(Oxidation (M))|F}VE[PA]{[DS]|[MA]|[CV]|TT}{I|L};[Q{I|L}]{M(Oxidation (M))|F}VA[EP]{[DS]|[MA]|[CV]|TT}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VEE[Q{I|L}]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVEE[Q{I|L}]{I|L};[Q{I|L}]{M(Oxidation (M))|F}V[DV]{[RE]|[WV]}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{I|L}EE[Q{I|L}]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVE[VP]{[CA]|SS}{I|L} 6.2662;5.4422;5.0492;4.9035;4.4916;3.9666;3.9666;3.8153;3.6973;3.1427 -;-;-;-;-;-;-;-;-;- 1031 1 1.239 53972.3 1.0 9891 4885 14762 HBL1_DMSO_200M_050219_2,14778 HBL1_DMSO_200M_050219_2,14778,IQIMKVEEI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14779 77.817 310.0 294410.0 25 0 21514.0 + 17789 KQIQELEEVL 10 125 614.8435326690187 1227.672512404837 2 614.8430053591728 MULTI CID FTMS 0 0 0 14762 272504.4375 1.0 0 0.0 17 Unmodified _KQIQELEEVL_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 70.33199760932243 0.018925923965799 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}RE{I|L}EEV{I|L} 10 3 + 88.082 0.0 0.0 7.1747 7.1747 76.262 0.0 0.0 0.0 0.0743832831149404 16.53212513775344 0.0743832831149404 0.0743832831149404 0 0.6677353201839438 1.5228787452803376 1.174742501084005 1.555462187404089 {NN|[MP]|[D{I|L}]|[EV]}{I|L}RE{I|L}EEV{I|L};[Q{I|L}]KQE{I|L}EEV{I|L};[KQ]{I|L}QE{I|L}EEV{I|L};{[QN]|[E{I|L}]|[KN]}VRE{I|L}EEV{I|L};[KG]A{I|L}QE{I|L}EEV{I|L};{[QN]|[E{I|L}]|[KN]}A[{I|L}A]E{I|L}EEV{I|L};{[QN]|[E{I|L}]|[KN]}Q[KQ]{I|L}EEV{I|L};{[QN]|[E{I|L}]|[KN]}E[RV]{I|L}EEV{I|L};{[QN]|[E{I|L}]|[KN]}AG[KQ]{I|L}EEV{I|L};[Q{I|L}]K[AG]E{I|L}EEV{I|L} 7.1747;7.1687;7.1604;6.994;6.8478;6.7592;6.5369;6.4688;6.4386;6.4222 -;-;+;-;-;-;-;-;-;- + 3341 1 1.239 71773.1 1.0 9892 4885 14762 HBL1_DMSO_200M_050219_2,14779 HBL1_DMSO_200M_050219_2,14779,KQIQELEEVL True True KQIQELEEVL 77.817365 614.843005359173 2262933.75 14762.0 ENSG00000116830|ENST00000369466|TTF2;;nc|ENSG00000116830|Q9UNY4-2|TTF2 5.158734957377116 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14780 77.82 153.0 551980.0 25 0 67404.0 + + 11652 AVLNALDKI 9 120 478.7920561611329 955.5695593890658 2 478.7926208376884 MULTI CID FTMS 0 0 0 14762 213391.34375 0.2722729139503264 -2 0.2407150268554687 18 Unmodified _GLATLAGLGIA_ nc|ENSG00000160783|Q6P1K2-6|PMF1;nc|ENSG00000160783|Q6P1K2-2|PMF1;ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;nc|ENSG00000160783|Q6P1K2-3|PMF1 34.40172386719151 0.2986346176549658 4 {[VA]|[{I|L}G]}{I|L}NA{I|L}DK{I|L} 9 -1 + 60.315 0.0 0.0 6.312 6.312 82.21 0.0 0.0 0.0 42.0217596488785 13.372505457509972 13.372505457509972 5.255762612236907 0 0.4247425010840047 2.0 0.3494850021680094 0.0 {[VA]|[{I|L}G]}{I|L}NA{I|L}DK{I|L};{[VA]|[{I|L}G]}VDKSPK{I|L};{[VA]|[{I|L}G]}VQA{I|L}DK{I|L};{[VA]|[{I|L}G]}{I|L}GGA{I|L}DK{I|L};{[VA]|[{I|L}G]}{I|L}NA{I|L}[TA]A{I|L};{[VA]|[{I|L}G]}{I|L}[QT]SPK{I|L};{[VA]|[{I|L}G]}{I|L}[C(Carbamidomethyl (C))R]PK{I|L};{[VA]|[{I|L}G]}V[AG]A{I|L}DK{I|L};{[VA]|[{I|L}G]}VQA{I|L}[TA]A{I|L};{[VA]|[{I|L}G]}{I|L}NR{[RE]|[WV]}V 6.312;5.762;5.6312;5.3483;5.2655;5.1105;4.8812;4.6676;4.5847;4.5736 -;-;-;-;-;-;-;-;-;- 822 + 1 1.239 71452.8 1.0 9893 4885 14762 HBL1_DMSO_200M_050219_2,14780 HBL1_DMSO_200M_050219_2,14780,GLATLAGLGIA False False AVLNALDKI 77.820394 478.792620837688 5647551.0 14762.0 nc|ENSG00000160783|Q6P1K2-6|PMF1;;nc|ENSG00000160783|Q6P1K2-2|PMF1;;ENSG00000160783|ENST00000368277|PMF1;;nc|ENSG00000160783|Q6P1K2-4|PMF1;;nc|ENSG00000160783|Q6P1K2-5|PMF1;;nc|ENSG00000160783|Q6P1K2-3|PMF1 3.0296289126078286 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14781 77.823 136.0 536620.0 25 0 97314.0 + + 7959 KTITDVINI 9 105 508.30383564018587 1014.5931183471718 2 508.8033325076103 MULTI CID FTMS 0 0 0 14762 183537.234375 0.5061181597857638 -2 0.2407150268554687 19 Unmodified _ELSTILLNL_ ENSG00000105220|ENST00000356487|GPI 21.53697664764585 0.2571576504437394 4 {NN|[MP]|[D{I|L}]|[EV]}T[KT]V{I|L}D 8 -1 33.532 0.0 0.0 3.305 0.0 0.0 0.0 126.078505880628 126.078505880628 15.573386166676606 0.0 0.0 0.0 0 0.0 0.585026652029182 1.174742501084005 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}T[KT]V{I|L}D 3.305 - 399 1 1.239 60395.4 1.0 9894 4885 14762 HBL1_DMSO_200M_050219_2,14781 HBL1_DMSO_200M_050219_2,14781,ELSTILLNL False False KTITDVINI 77.823148 508.80333250761 3221495.75 14762.0 ENSG00000105220|ENST00000356487|GPI 0.5973083972930908 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14782 77.833 579.0 349120.0 25 0 23654.0 22493 LPVPMLNI 8 188 448.7679775021687 895.5214020711373 2 449.2739440798759 MULTI CID FTMS 0 0 0 14762 126268.921875 0.7962474579076807 -1 0.1810684204101562 20 Unmodified _LPVPMLNI_ ENST00000429422.5_2_3:47893780-47893864:-|nuORF 15.768221252438446 0.6779680726941459 4 [{I|L}P]ATVN 6 5 33.184 0.0 0.0 3.7055 0.0 0.0 0.0 297.1691360770914 297.1691360770914 11.73016644771252 0.0 0.0 0.0 0 0.0 1.154901959985743 1.1307196863200843 0.3494850021680094 [{I|L}P]ATVN 3.7055 - 638 1 1.239 156316.5 1.0 9895 4885 14762 HBL1_DMSO_200M_050219_2,14782 HBL1_DMSO_200M_050219_2,14782,LPVPMLNI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14784 77.838 12.0 4449700.0 25 0 390640.0 + 26737 NYYPYTITEY 10 71 663.7979074213717 1325.5812619095434 2 663.7988769412041 MULTI CID FTMS 0 0 0 14783 4249847.5 1.0 0 0.0 1 Unmodified _NYYPYTITEY_ ENSG00000154217|ENST00000581322|PITPNC1;nc|ENSG00000154217|Q9UKF7-2|PITPNC1 24.020572477871973 0.4289996903560794 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPTE 6 6 26.392 0.0 0.0 1.991 0.0 0.0 0.0 636.2241201461246 636.2241201461246 1.955094722265116 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPTE 1.991 - 358 1 1.239 45511.8 1.0 9896 4886 14783 HBL1_DMSO_200M_050219_2,14784 HBL1_DMSO_200M_050219_2,14784,NYYPYTITEY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14785 77.839 30.0 1328400.0 25 0 331590.0 + 29167 QFVFRTRRR 9 51 633.3691586956885 1264.723764458177 2 633.3699218630791 MULTI CID FTMS 0 0 0 14783 1847624.75 0.9183525395641562 -1 0.0571517944335937 2 Unmodified _QFVFRTRRR_ REV__ENSG00000172732|ENST00000308110|MUS81 0.5247636613948944 0.8963649302248013 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.239 39428.3 1.0 9897 4886 14783 HBL1_DMSO_200M_050219_2,14785 HBL1_DMSO_200M_050219_2,14785,QFVFRTRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14786 77.841 61.0 1002500.0 25 0 124630.0 + 13864 HVIQALESL 9 85 505.2878978049559 1008.5612426767118 2 505.2877990603447 MULTI CID FTMS 0 0 0 14783 801692.875 1.0 0 0.0 3 Unmodified _HVIQALESL_ ENSG00000117505|ENST00000370272|DR1 46.020951573049366 0.0490941689151868 4 [HV]{I|L}QA{I|L}E{[TV]|[{I|L}S]} 9 0 + 63.963 0.0 0.0 6.342 6.342 81.812 0.0 0.0 0.0 19.62189282359297 37.47933455448525 19.62189282359297 4.771212547196626 0 0.805462187404089 1.3979400086720375 0.0 0.3054621874040891 + + [HV]{I|L}QA{I|L}E{[TV]|[{I|L}S]};[HV]{I|L}QAE{I|L}{[TV]|[{I|L}S]};[HV]{I|L}[AG]A{I|L}E{[TV]|[{I|L}S]};[HV]{I|L}[AG]AE{I|L}{[TV]|[{I|L}S]};[HV][QA]{I|L}{I|L}E{[TV]|[{I|L}S]};[HV][QA]{I|L}E{I|L}{[TV]|[{I|L}S]} 6.342;5.8689;5.1261;4.653;4.0054;3.5323 +;-;-;-;-;- + 128 1 1.239 51173.7 1.0 9898 4886 14783 HBL1_DMSO_200M_050219_2,14786 HBL1_DMSO_200M_050219_2,14786,HVIQALESL True True HVIQALESL 77.840686 505.287799060345 6666417.0 14783.0 ENSG00000117505|ENST00000370272|DR1 5.442941824595134 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14787 77.842 71.0 850900.0 25 0 84274.0 + 15908 ISTNRQTLALA 11 75 594.3425712038348 1186.6705894744696 2 594.3431884646416 MULTI CID FTMS 0 0 0 14783 714772.6875 0.31447307303914 3 -0.3526840209960937 4 Unmodified _ISTNRQTLALA_ REV__ENST00000361654.8_3_12:122757317-122757422:-|nuORF 14.40537977576856 0.7354982482299568 4 VV{M(Oxidation (M))|F}PE 5 -1 56.542 0.0 0.0 4.7648 0.0 0.0 0.0 612.3447359674436 612.3447359674436 33.50956286923086 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 VV{M(Oxidation (M))|F}PE 4.7648 - 72 + 1 1.239 52488.0 1.0 9899 4886 14783 HBL1_DMSO_200M_050219_2,14787 HBL1_DMSO_200M_050219_2,14787,ISTNRQTLALA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14788 77.844 67.0 610420.0 25 0 53028.0 6486 EAHVRAQLLKS 11 59 626.3616014067157 1250.7086498802314 2 626.3621093630791 MULTI CID FTMS 0 0 0 14783 573609.5625 0.8787441223189588 1 -0.1660690307617187 5 Unmodified _EAHVRAQLLKS_ ENSG00000123700|ENST00000243457|KCNJ2 2.735195868890462 0.8622431031272658 4 C 1 11 5.4846 0.0 0.0 0.43852 0.0 0.0 625.4334245329695 519.2415865533811 1144.6750110863509 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.43852 - 2 + 1 1.239 36908.7 1.0 9900 4886 14783 HBL1_DMSO_200M_050219_2,14788 HBL1_DMSO_200M_050219_2,14788,EAHVRAQLLKS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14789 77.847 173.0 688710.0 25 0 86130.0 + 27872 PLRVPIGL 8 102 432.7867275479063 863.5589021626125 2 432.7869140505791 MULTI CID FTMS 0 0 0 14783 346319.375 0.7631005450049272 -1 0.0571517944335937 6 Unmodified _PLRVPIGL_ REV__ENST00000341735.3_1_15:90319632-90321465:+|nuORF 26.34127834903884 0.4900704351052977 4 {I|L}P 2 -1 44.222 0.0 0.0 5.1209 0.0 0.0 0.0 650.399814785611 650.399814785611 28.49144313929287 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {I|L}P 5.1209 - 77 + 1 1.239 94649.2 1.0 9901 4886 14783 HBL1_DMSO_200M_050219_2,14789 HBL1_DMSO_200M_050219_2,14789,PLRVPIGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14790 77.851 208.0 448960.0 25 0 34872.0 + 32276 RWPDYVREL 9 94 411.88402130637087 1232.6302345193126 3 411.8839294314384 MULTI CID FTMS 0 0 0 14783 328314.90625 0.2845206363422862 12 -1.2951736450195312 7 Unmodified _RWPDYVREL_ ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;nc|ENSG00000174953|Q9H2U1-3|DHX36 57.72198328787511 0.0273433238377839 4 [WR]PDY 5 4 43.741 0.0 0.0 3.5486 0.0 0.0 0.0 512.28325332082 512.28325332082 25.536298044881125 0.0 0.0 0.0 0 1.3182503180159344 1.5228787452803376 0.3494850021680094 0.6861818737241735 + [WR]PDY 3.5486 + + 254 1 1.239 78644.7 1.0 9902 4886 14783 HBL1_DMSO_200M_050219_2,14790 HBL1_DMSO_200M_050219_2,14790,RWPDYVREL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14791 77.853 56.0 767950.0 25 0 66199.0 + -1 PLMLLQVPM 9 89 537.2898621748571 0 537.2887451052666 PEAK CID FTMS 0 0 0 14783 295364.0625 0.2394031801173919 8 -0.8664779663085938 8 2 Oxidation (M) _PLM(Oxidation (M))LLQVPM(Oxidation (M))_ REV__ENST00000344692.7_1_8:144356972-144357419:+|nuORF 13.50788311687929 0.2720325786695375 4 G{I|L}Q 3 -1 9.0411 0.0 0.0 0.84294 0.0 0.0 293.13588984393215 478.2427462213501 771.3786360652822 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L}Q 0.84294 - 42 + 1 1.239 39392.2 1.0 9903 4886 14783 HBL1_DMSO_200M_050219_2,14791 HBL1_DMSO_200M_050219_2,14791,PLMLLQVPM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14792 77.866 773.0 300000.0 25 0 26712.0 + 35957 SVPNKDVFQEL 11 173 638.332530858804 1274.650508784408 2 638.3328124880791 MULTI CID FTMS 0 0 0 14783 261175.328125 0.1477879979094397 -5 0.4948577880859375 9 Unmodified _SVPNKDVFQEL_ ENSG00000115919|ENST00000264170|KYNU 75.5705956163825 0.0162609445057862 4 [VS]PYQ{M(Oxidation (M))|F}VDK 9 7 98.184 0.0 0.0 7.7028 0.0 0.0 0.0 208.0730379693969 208.0730379693969 34.1847792642792 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.7416440611282624 1.4291746928241125 [VS]PYQ{M(Oxidation (M))|F}VDK 7.7028 - 10922 + 1 1.239 172577.6 1.0 9904 4886 14783 HBL1_DMSO_200M_050219_2,14792 HBL1_DMSO_200M_050219_2,14792,SVPNKDVFQEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14793 77.88 800.0 204370.0 25 0 30984.0 2811 ATVTLWRALLR 11 190 650.396309788722 1298.7780666442438 2 650.3970825076103 MULTI CID FTMS 0 0 0 14783 232672.78125 1.0 0 0.0 10 Unmodified _ATVTLWRALLR_ ENST00000448344.1_1_1:65533353-65533392:-|nuORF 12.240655878213236 0.7805268987462184 4 [{I|L}T]VTA{M(Oxidation (M))|F} 6 7 18.395 0.0 0.0 1.4163 0.0 0.0 0.0 663.4037129667626 663.4037129667626 7.681698252312518 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.7372118693881548 0.0 [{I|L}T]VTA{M(Oxidation (M))|F} 1.4163 - 630 1 1.239 137023.4 0.9800000190734864 9905 4886 14783 HBL1_DMSO_200M_050219_2,14793 HBL1_DMSO_200M_050219_2,14793,ATVTLWRALLR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14794 77.883 145.0 374900.0 25 0 64730.0 + 29513 QLLHIAESL 9 88 512.2954281600879 1022.5763033869758 2 512.2960693240166 MULTI CID FTMS 0 0 0 14783 191326.078125 0.345983603055561 2 -0.21905517578125 11 Unmodified _QLLHIAESL_ REV__ENSG00000144596|ENST00000621039|GRIP2;REV__ENSG00000155974|ENST00000359742|GRIP1;REV__nc|ENSG00000144596|Q9C0E4-2|GRIP2;REV__nc|ENSG00000155974|Q9Y3R0-2|GRIP1;REV__nc|ENSG00000155974|Q9Y3R0-3|GRIP1 21.74664581756881 0.2544899275067181 4 {M(Oxidation (M))|F}KS{I|L} 4 -1 24.399 0.0 0.0 2.386 0.0 0.0 529.2993391309195 0.0 529.2993391309195 0.0 -0.2853716820872201 -0.2853716820872201 0.0 0 0.0 0.0 0.3252574989159953 0.0 {M(Oxidation (M))|F}KS{I|L} 2.386 - 395 + 1 1.239 49457.1 1.0 9906 4886 14783 HBL1_DMSO_200M_050219_2,14794 HBL1_DMSO_200M_050219_2,14794,QLLHIAESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14795 77.897 800.0 344320.0 25 0 10117.0 -1 0 166 1047.4737781294805 2092.933003325761 2 1047.976123034954 MULTI CID FTMS 0 0 0 14783 178125.671875 0.3252679827149822 -1 0.0571517944335937 12 4 {[DA]|[EG]}TAA[Y{M(Oxidation (M))|F}]YY{I|L}ATDAA 15 -1 86.111 0.0 0.0 4.1144 0.0 0.0 0.0 482.234867383936 482.234867383936 15.915309813015256 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 1.6791746928241125 0.0 {[DA]|[EG]}TAA[Y{M(Oxidation (M))|F}]YY{I|L}ATDAA 4.1144 - 131929 1 1.239 170155.6 0.8299999833106995 9907 4886 14783 HBL1_DMSO_200M_050219_2,14795 HBL1_DMSO_200M_050219_2,14795, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14796 77.901 223.0 358130.0 25 0 41297.0 + 43565 YAAPGGLIGV 10 116 459.2589206961319 916.5032884590638 2 459.2593566775322 MULTI CID FTMS 0 0 0 14783 173878.125 1.0 0 0.0 13 Unmodified _YAAPGGLIGV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 18.13498045792455 0.5432546531930572 4 [R{I|L}]D{[WS]|[C(Carbamidomethyl (C)){I|L}]}K{I|L} 7 9 + 14.742 0.0 0.0 1.6085 1.6085 59.756 0.0 0.0 0.0 1.3768163763378976 0.1223445641701133 0.1223445641701133 0.1223445641701133 0 0.0 0.0 0.3807196863200844 0.0 [R{I|L}]D{[WS]|[C(Carbamidomethyl (C)){I|L}]}K{I|L};[R{I|L}]D{[ET]|[MV]}KGV;[{I|L}P]NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R;{[QG]|[NA]}{I|L}P{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R;{[QG]|[NA]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}R;[VG][PA]A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R;{[VA]|[{I|L}G]}AG{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}R;{[VA]|[{I|L}G]}AGP{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R;[AG]{I|L}GP{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R;[AG]{I|L}G{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}R 1.6085;1.5951;1.1431;0.85063;0.85063;0.75432;0.36259;0.36259;0.13865;0.13865 -;-;-;-;-;-;-;-;-;- 323 + 1 1.239 70117.0 1.0 9908 4886 14783 HBL1_DMSO_200M_050219_2,14796 HBL1_DMSO_200M_050219_2,14796,YAAPGGLIGV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14797 77.916 800.0 187070.0 25 0 26938.0 + 28789 PYKRSFAKLLS 11 178 655.3823079751647 1308.7500630171294 2 655.3823119997978 MULTI CID FTMS 0 0 0 14783 171685.046875 0.2285118624057759 7 -0.72052001953125 14 Unmodified _PYKRSFAKLLS_ REV__ENST00000468844.1_1_X:118925076-118925472:-|nuORF 5.731851221503515 0.8481046878870278 4 V 1 -1 10.181 0.0 0.0 0.77792 0.0 0.0 1191.6705017151746 0.0 1191.6705017151746 0.0 0.5033508094068129 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.77792 - 268 + 1 1.239 125328.7 0.8399999737739563 9909 4886 14783 HBL1_DMSO_200M_050219_2,14797 HBL1_DMSO_200M_050219_2,14797,PYKRSFAKLLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14798 77.93 800.0 197590.0 25 0 44255.0 -1 0 72 1140.12037456086 3417.3392942827804 3 1140.789843738079 MULTI CID FTMS 0 0 0 14783 161787.171875 0.4612873196249498 -1 0.0571517944335937 15 4 ATWT 4 -1 25.059 0.0 0.0 0.73329 0.0 0.0 2368.8448617650056 586.2652239117688 2955.1100856767744 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0356668758921828 0.0 ATWT 0.73329 - 410 + 1 1.239 129808.7 0.699999988079071 9910 4886 14783 HBL1_DMSO_200M_050219_2,14798 HBL1_DMSO_200M_050219_2,14798, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14799 77.944 800.0 233460.0 25 0 20160.0 + 4451 DAWRVPLKV 9 199 361.8818947246476 1082.6238547741427 3 361.8816100955009 MULTI CID FTMS 0 0 0 14783 161268.046875 0.1153043573734783 3 -0.3526840209960937 16 Unmodified _DAWRVPLKV_ ENSG00000157212|ENST00000404141|PAXIP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;nc|ENSG00000157212|Q6ZW49-2|PAXIP1 18.373094154950223 0.3393451798331396 4 PW{[HG]|PP}DD{I|L} 7 7 17.596 0.0 0.0 1.6253 0.0 0.0 244.2356606119129 0.0 244.2356606119129 0.0 5.377297368733963 0.0 0.0 0 0.0 0.0 0.6203715150305281 0.0 PW{[HG]|PP}DD{I|L} 1.6253 - 281 + 1 1.239 151234.9 0.5799999833106995 9911 4886 14783 HBL1_DMSO_200M_050219_2,14799 HBL1_DMSO_200M_050219_2,14799,DAWRVPLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14800 77.959 800.0 222420.0 25 0 21737.0 + 27069 QQFPDIPESV 10 179 579.7798408581325 1157.545128783065 2 580.2851440310478 MULTI CID FTMS 0 0 0 14783 152608.234375 0.5708912270775259 -2 0.23822021484375 17 Unmodified _PESQQVRWE_ ENST00000583108.5_1_17:65733963-65734484:+|nuORF;ENSG00000130935|ENST00000253247|NOL11 15.847184025352805 0.4077185912009129 4 [EP]S{[{M(Oxidation (M))|F}H]|[RQ]}{I|L} 6 4 30.691 0.0 0.0 2.6514 0.0 0.0 0.0 444.1876228574391 444.1876228574391 13.000671555173824 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.7302046884880937 0.0 [EP]S{[{M(Oxidation (M))|F}H]|[RQ]}{I|L} 2.6514 - 2154 1 1.239 139486.4 0.7900000214576721 9912 4886 14783 HBL1_DMSO_200M_050219_2,14800 HBL1_DMSO_200M_050219_2,14800,PESQQVRWE False False QQFPDIPESV 77.958594 580.285144031048 1420067.0 14783.0 ENST00000583108.5_1_17:65733963-65734484:+|nuORF;;ENSG00000130935|ENST00000253247|NOL11 7.630973180135091 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14801 77.972 800.0 164370.0 25 0 11734.0 + -1 NYYGCIDTIET 11 166 674.788191526773 1347.5618301203458 2 674.7897216677666 MULTI CID FTMS 0 0 0 14783 116700.765625 1.0 0 0.0 18 Carbamidomethyl (C) _NYYGC(Carbamidomethyl (C))IDTIET_ REV__ENST00000557943.5_1_15:76508771-76508903:-|nuORF 22.736283301280096 0.5583477779825423 4 [YN]YYP[QP][{M(Oxidation (M))|F}E]Q 10 -1 + 45.652 0.0 0.0 3.3878 3.3878 64.759 0.0 0.0 0.0 30.167659268138323 0.6914468044949018 0.6914468044949018 1.383026981662816 0 0.9247425010840048 2.0 0.8494850021680094 0.3807196863200844 [YN]YYP[QP][{M(Oxidation (M))|F}E]Q;[YN]YYP{[NV]|[RG]}[CS][EP];[YN]YYP[QP][C(Carbamidomethyl (C))M]{I|L};[YN]YY{[NV]|[RG]}P[CS][EP];[YN]YPY[QP][C(Carbamidomethyl (C))M]{I|L};[YN]YP{[ES]|[DT]|[{I|L}C]}[PG]YMQ;[YN]YYP[KG][DC][EP];[YN]Y[PG]{[ES]|[DT]|[{I|L}C]}PY{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]YPY[QP][{M(Oxidation (M))|F}E]Q;[YN]YP[TA][TP]YMQ 3.3878;3.2851;3.2042;3.1767;3.0735;2.9735;2.969;2.9603;2.9419;2.8428 -;-;-;-;-;-;-;-;-;- 1912 + 1 1.239 98884.2 0.6299999952316284 9913 4886 14783 HBL1_DMSO_200M_050219_2,14801 HBL1_DMSO_200M_050219_2,14801,NYYGCIDTIET False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14802 77.986 800.0 62443.0 25 0 14569.0 -1 0 38 1163.457987468611 3487.352133006033 3 1163.797290027142 MULTI CID FTMS 0 0 0 14783 115954.0390625 0.000946840664544 60 -6.4307403564453125 19 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20043 0.0 0.0 2001.6876627253453 1335.5840587697812 3337.2717214951267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20043 - 4 + 1 1.239 48494.7 0.5299999713897705 9914 4886 14783 HBL1_DMSO_200M_050219_2,14802 HBL1_DMSO_200M_050219_2,14802, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14803 77.999 689.0 170230.0 25 0 17341.0 15309 IPKVPKQP 8 129 453.7924634572879 0 453.7922241091728 PEAK CID FTMS 0 0 0 14783 113472.3046875 0.003498656086024 52 -5.560737609863281 20 Unmodified _IPKVPKQP_ ENSG00000166435|ENST00000684022|XRRA1;ENST00000431210.2_1_11:74555176-74574187:-|nuORF;ENST00000531849.5_1_11:74554845-74617298:-|nuORF;nc|ENSG00000166435|Q6P2D8-2|XRRA1;nc|ENSG00000166435|Q6P2D8-3|XRRA1;nc|ENSG00000166435|Q6P2D8-4|XRRA1;nc|ENSG00000166435|Q6P2D8-5|XRRA1;nc|ENSG00000166435|Q6P2D8|XRRA1 30.22481116460888 0.2280668331718824 4 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 6 7 17.88 0.0 0.0 1.9745 0.0 0.0 113.083711531053 66.0356920831664 179.11940361421938 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 PP{I|L}[R{M(Oxidation (M))|F}]{I|L} 1.9745 - 359 + 1 1.239 95974.2 1.0 9915 4886 14783 HBL1_DMSO_200M_050219_2,14803 HBL1_DMSO_200M_050219_2,14803,IPKVPKQP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14805 78.005 63.0 655260.0 25 0 50591.0 24179 LYYLFSSF 8 78 520.2595576448587 1038.5045623565172 2 520.2588989138603 MULTI CID FTMS 0 0 0 14804 344592.15625 0.2708952413015374 1 -0.0529861450195312 1 Unmodified _LYYLFSSF_ ENSG00000103546|ENST00000568943|SLC6A2;nc|ENSG00000103546|P23975-2|SLC6A2;nc|ENSG00000103546|P23975-3|SLC6A2 10.183394434864962 0.7604730176254005 4 [VP]NES 5 7 19.13 0.0 0.0 1.842 0.0 0.0 0.0 509.2431847532548 509.2431847532548 1.6946999598069858 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 [VP]NES 1.842 - 55 1 1.252 40423.2 1.0 9916 4887 14804 HBL1_DMSO_200M_050219_2,14805 HBL1_DMSO_200M_050219_2,14805,LYYLFSSF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14806 78.006 58.0 926090.0 25 0 73530.0 + 22206 LPQPVPLSV 9 85 475.2901123370634 948.5656717409267 2 475.2899658083916 MULTI CID FTMS 0 0 0 14804 657718.9375 0.8017433637251895 1 -0.0529861450195312 2 Unmodified _LPQPVPLSV_ ENSG00000135913|ENST00000258399|USP37;nc|ENSG00000135913|Q86T82-2|USP37 54.773552608820026 0.0299037012502309 4 [{I|L}P]GGP{I|L}P{I|L}SV 10 3 + 60.781 0.0 0.0 6.4077 6.4077 76.83 0.0 0.0 0.0 10.413926851582254 11.20506544868192 10.413926851582254 1.7609125905568137 0 1.218765315847925 1.3979400086720375 0.0 0.0 [{I|L}P]GGP{I|L}P{I|L}SV;[{I|L}P]GAPVP{I|L}SV;[{I|L}P]NP{I|L}P{I|L}SV;[{I|L}P]QPVP{I|L}SV;[{I|L}P]VPQP{I|L}SV;[VP]AGP{I|L}P{I|L}SV;[VP]AAPVP{I|L}SV;[VP]QP{I|L}P{I|L}SV;[QP]VP{I|L}P{I|L}SV;[QP]{I|L}PVP{I|L}SV 6.4077;6.2221;6.0364;5.8508;5.4017;5.3098;5.1242;4.9386;4.7483;4.5627 -;-;-;+;-;-;-;-;-;- + 374 1 1.252 47482.6 1.0 9917 4887 14804 HBL1_DMSO_200M_050219_2,14806 HBL1_DMSO_200M_050219_2,14806,LPQPVPLSV True True LPQPVPLSV 78.00616 475.289965808392 6852751.5 14804.0 nc|ENSG00000135913|Q86T82-2|USP37;;ENSG00000135913|ENST00000258399|USP37 4.8216315905253095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14807 78.007 50.0 1505900.0 25 0 141000.0 + 41865 VPYPLPKI 8 76 463.78933281423656 925.5641126952733 2 463.7895080447197 MULTI CID FTMS 0 0 0 14804 1096468.75 0.4750540760389802 -4 0.4639358520507812 3 Unmodified _VPYPLPKI_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1 53.57557251787612 0.1224291679108181 4 VPYP{I|L}PK{I|L} 8 0 + 73.697 0.0 0.0 7.9624 7.9624 97.428 0.0 0.0 0.0 37.12511633123143 10.204262829037845 10.204262829037845 73.69701943100473 0 1.1861818737241734 1.3979400086720375 0.0 0.0 + + VPYP{I|L}PK{I|L} 7.9624 + + 79 + 1 1.252 63990.4 1.0 9918 4887 14804 HBL1_DMSO_200M_050219_2,14807 HBL1_DMSO_200M_050219_2,14807,VPYPLPKI True True VPYPLPKI 78.007468 463.78950804472 192413808.0 14804.0 nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;;nc|ENSG00000141279|P55786-2|NPEPPS;;nc|ENSG00000274487|A6NEC2|NPEPPSL1;;ENSG00000141279|ENST00000322157|NPEPPS;;ENST00000602788.5_1_17:45660176-45669919:+|nuORF 6.970163186391194 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14808 78.009 64.0 1057400.0 25 0 61343.0 + 12385 GTIDEIQKLHI 11 85 422.90619685800255 1265.6967611742075 3 422.9057189822197 MULTI CID FTMS 0 0 0 14804 799964.375 0.2841750098688607 -2 0.2232208251953125 4 Unmodified _GTIDEIQKLHI_ ENSG00000167986|ENST00000301764|DDB1 51.76506608216692 0.1078551230621665 4 {[SA]|[TG]}{I|L}DE{I|L}QK{I|L}H{I|L} 11 0 + 87.353 0.0 0.0 6.9015 6.9015 79.389 0.0 0.0 0.0 27.367585652254185 2.082759424270833 2.082759424270833 2.082759424270833 0 0.3807196863200844 2.0 0.5 0.8494850021680094 + + {[SA]|[TG]}{I|L}DE{I|L}QK{I|L}H{I|L};{[SA]|[TG]}{I|L}DE{I|L}QK{I|L}{I|L}H;{[SA]|[TG]}{I|L}DE{I|L}[AG]K{I|L}H{I|L};{[SA]|[TG]}{I|L}DE{I|L}[AG]K{I|L}{I|L}H 6.9015;6.737;6.1803;6.0158 +;-;-;- + 356 + 1 1.252 67457.0 1.0 9919 4887 14804 HBL1_DMSO_200M_050219_2,14808 HBL1_DMSO_200M_050219_2,14808,GTIDEIQKLHI True True GTIDEIQKLHI 78.009005 422.90571898222 45394031.0 14804.0 ENSG00000167986|ENST00000301764|DDB1 5.712311108907064 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14809 78.011 68.0 634910.0 25 0 126120.0 + 43395 WQRPQKRKR 9 63 641.8822995054525 1281.7500460777048 2 641.8829223513603 MULTI CID FTMS 0 0 0 14804 728756.0 1.0 0 0.0 5 Unmodified _WQRPQKRKR_ REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF 0.6014990680409731 0.8936861360942873 4 K 1 -1 1.1092 0.0 0.0 0.086541 0.0 0.0 867.5031416361018 283.11884485416255 1150.6219864902644 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.086541 + + 1 + 1 1.252 41180.1 1.0 9920 4887 14804 HBL1_DMSO_200M_050219_2,14809 HBL1_DMSO_200M_050219_2,14809,WQRPQKRKR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14810 78.012 70.0 929820.0 25 0 97861.0 + 13659 HPVSALMEI 9 100 498.7626356604008 995.5107183876016 2 498.7627441287041 MULTI CID FTMS 0 0 0 14804 609311.625 0.8169935916737431 -1 0.1660690307617187 6 Unmodified _HPVSALMEI_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON 60.38955033654506 0.025866396858536 4 [VP]TGH{I|L}ME{I|L} 9 4 + 53.232 0.0 0.0 5.3472 5.3472 70.552 0.0 0.0 0.0 0.7135590853566782 10.330145895351848 0.7135590853566782 0.7135590853566782 0 0.6069758080123702 0.8538719643217619 1.2302046884880935 0.0 [VP]TGH{I|L}ME{I|L};[{I|L}P]SGH{I|L}ME{I|L};[VP]HSA{I|L}ME{I|L};[PS]{I|L}GH{I|L}ME{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSA{I|L}ME{I|L};[VP]TG{I|L}HME{I|L};[{I|L}P]SG{I|L}HME{I|L};[PS]{I|L}G{I|L}HME{I|L};[PS][HV]A{I|L}ME{I|L};[VP]TG{I|L}MHE{I|L} 5.3472;5.2755;5.2217;4.7123;4.6893;4.6624;4.5907;4.0275;3.6105;3.5336 -;-;-;-;+;-;-;-;-;- + 453 1 1.252 54980.2 1.0 9921 4887 14804 HBL1_DMSO_200M_050219_2,14810 HBL1_DMSO_200M_050219_2,14810,HPVSALMEI True True HPVSALMEI 78.012299 498.762744128704 6264939.5 14804.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-9|SON 2.793118715286255 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14811 78.014 50.0 1070800.0 25 0 137200.0 + 45749 YYIQNGIQSF 10 64 616.8001190868459 1231.5856852404918 2 616.8015624880791 MULTI CID FTMS 0 0 0 14804 605925.1875 0.8600296576542243 -1 0.1660690307617187 7 Unmodified _YYIQNGIQSF_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 21.74664581756881 0.480091245866545 4 S{M(Oxidation (M))|F} 2 8 24.776 0.0 0.0 2.0117 0.0 0.0 979.4744103492576 0.0 979.4744103492576 0.0 15.435391898196205 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + S{M(Oxidation (M))|F} 2.0117 + + 96 + 1 1.252 43332.6 1.0 9922 4887 14804 HBL1_DMSO_200M_050219_2,14811 HBL1_DMSO_200M_050219_2,14811,YYIQNGIQSF False True YYIQNGIQSF 78.013628 616.801562488079 6071550.0 14804.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 2.6945718924204507 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14812 78.015 60.0 654250.0 25 0 67326.0 + 10458 FTHSQFIVV 9 72 539.2915120943334 1076.5684712554666 2 539.2901489138603 MULTI CID FTMS 0 0 0 14804 570644.875 0.9646694970401104 -1 0.1660690307617187 8 Unmodified _FTHSQFIVV_ ENSG00000136824|ENST00000374793|SMC2 29.081581746732265 0.1611639662936252 4 SQ{M(Oxidation (M))|F}{I|L}VV 6 3 30.323 0.0 0.0 2.8166 0.0 0.0 385.1755238263688 0.0 385.1755238263688 0.0 14.124628150806371 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 + SQ{M(Oxidation (M))|F}{I|L}VV 2.8166 + + 72 1 1.252 38080.7 1.0 9923 4887 14804 HBL1_DMSO_200M_050219_2,14812 HBL1_DMSO_200M_050219_2,14812,FTHSQFIVV False True FTHSQFIVV 78.015128 539.29014891386 5832455.5 14804.0 ENSG00000136824|ENST00000374793|SMC2 5.931164105733235 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14813 78.017 56.0 803220.0 25 0 99528.0 3069 AVLTQIDQI 9 92 500.78753520610513 999.5605174790104 2 500.7875549197197 MULTI CID FTMS 0 0 0 14804 513357.75 0.5731228184020891 -2 0.2232208251953125 9 Unmodified _AVLTQIDQI_ ENSG00000071539|ENST00000166345|TRIP13;ENST00000512024.5_1_5:893053-908577:+|nuORF 30.22481116460888 0.1466181017706357 4 {[VA]|[{I|L}G]}ATD 5 5 27.108 0.0 0.0 2.712 0.0 0.0 0.0 539.3193730300446 539.3193730300446 7.199915470362011 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {[VA]|[{I|L}G]}ATD 2.712 - 268 1 1.252 39834.0 1.0 9924 4887 14804 HBL1_DMSO_200M_050219_2,14813 HBL1_DMSO_200M_050219_2,14813,AVLTQIDQI False True GLADTGAREDEPASL 78.016547 500.7863 0.0 14804.0 ENSG00000141639|ENST00000400384|MAPK4 -0.3340600530306498 3.0 False 15.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14814 78.018 69.0 935670.0 25 0 108020.0 + 2747 ATLEKVIEI 9 103 508.30383564018587 1014.5931183471718 2 508.3053466677666 MULTI CID FTMS 0 0 0 14804 423726.375 1.0 0 0.0 10 Unmodified _ATLEKVIEI_ ENSG00000108840|ENST00000682912|HDAC5;nc|ENSG00000108840|Q9UQL6-2|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5 37.07464296494664 0.0915153923251136 4 {[QN]|[E{I|L}]|[KN]}KVE{I|L}{[RE]|[WV]} 8 4 + 44.447 0.0 0.0 4.3807 4.3807 68.062 0.0 0.0 0.0 3.881801713828814 9.534021960761264 3.881801713828814 1.478174818886373 0 0.0 1.154901959985743 0.4247425010840047 0.8807196863200843 {[QN]|[E{I|L}]|[KN]}KVE{I|L}{[RE]|[WV]};{[QN]|[E{I|L}]|[KN]}KV{I|L}E{[RE]|[WV]};{[QN]|[E{I|L}]|[KN]}KVTA{I|L}QN;[TA]{I|L}[{I|L}A]{I|L}E{[RE]|[WV]};[{I|L}T]A[{I|L}A]{I|L}E{[RE]|[WV]};{[QN]|[E{I|L}]|[KN]}KV{I|L}[TA]QN;[TA]VVV{I|L}E{[RE]|[WV]};[{I|L}T][VG]V{I|L}E{[RE]|[WV]};[TA]{I|L}[{I|L}A]E{I|L}{[RE]|[WV]};[{I|L}T]A[{I|L}A]E{I|L}{[RE]|[WV]} 4.3807;4.235;4.0444;2.7904;2.73;2.7087;2.6195;2.5591;2.4433;2.3828 -;-;-;-;-;-;-;-;-;- 880 1 1.252 55317.2 1.0 9925 4887 14804 HBL1_DMSO_200M_050219_2,14814 HBL1_DMSO_200M_050219_2,14814,ATLEKVIEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14815 78.02 64.0 599830.0 25 0 76862.0 + 33821 SLDSWTILAS 10 72 546.7819513520046 1091.5493497708092 2 546.7800781130791 MULTI CID FTMS 0 0 0 14804 429704.59375 0.5165960492305842 1 -0.0529861450195312 11 Unmodified _SLDSWTILAS_ REV__nc|ENSG00000117632|P16949-2|STMN1 13.90604991867851 0.6142120002215601 4 {[TV]|[{I|L}S]}[R{I|L}][DN]Y{I|L} 8 -1 15.864 0.0 0.0 1.4533 0.0 0.0 0.0 114.02405615192166 114.02405615192166 3.873949984654248 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}[R{I|L}][DN]Y{I|L} 1.4533 - 49 1 1.252 33539.7 1.0 9926 4887 14804 HBL1_DMSO_200M_050219_2,14815 HBL1_DMSO_200M_050219_2,14815,SLDSWTILAS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14816 78.022 91.0 756930.0 25 0 93514.0 17452 KNRFWIKEV 9 100 610.3483383297711 1218.682123726342 2 610.3481323122978 MULTI CID FTMS 0 0 0 14804 409943.625 0.8174356073443978 1 -0.0529861450195312 12 Unmodified _KNRFWIKEV_ ENST00000303329.8_1_15:80888135-80888297:+|nuORF 5.731851221503515 0.7145881442174411 4 E 1 8 5.4846 0.0 0.0 0.45004 0.0 0.0 261.2532429663796 825.3712862604124 1086.624529226792 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.45004 + + 55 + 1 1.252 55739.6 1.0 9927 4887 14804 HBL1_DMSO_200M_050219_2,14816 HBL1_DMSO_200M_050219_2,14816,KNRFWIKEV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14817 78.025 177.0 504720.0 25 0 57602.0 + + 21644 LPTFVRSI 8 93 466.78195425504936 0 466.7821533083916 PEAK CID FTMS 0 0 0 14804 398148.375 1.0 0 0.0 13 Unmodified _LPLFTSVR_ nc|ENSG00000156515|P19367-2|HK1;ENST00000494253.1_1_10:71098016-71144300:+|nuORF;nc|ENSG00000156515|P19367-4|HK1;nc|ENSG00000156515|P19367-3|HK1;ENSG00000156515|ENST00000359426|HK1 26.88365393820708 0.2878692218834006 4 PT{M(Oxidation (M))|F}V 4 -1 29.438 0.0 0.0 3.1601 0.0 0.0 113.08400017064066 371.2053316705688 484.2893318412095 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.0 PT{M(Oxidation (M))|F}V 3.1601 - 157 + 1 1.252 74044.7 1.0 9928 4887 14804 HBL1_DMSO_200M_050219_2,14817 HBL1_DMSO_200M_050219_2,14817,LPLFTSVR False False LPTFVRSI 78.025199 466.782153308392 13843423.0 14804.0 nc|ENSG00000156515|P19367-2|HK1;;ENST00000494253.1_1_10:71098016-71144300:+|nuORF;;nc|ENSG00000156515|P19367-4|HK1;;nc|ENSG00000156515|P19367-3|HK1;;ENSG00000156515|ENST00000359426|HK1 3.670117060343424 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14818 78.027 60.0 714650.0 25 0 87800.0 -1 0 92 563.3030475705666 562.2957711039666 1 563.3030883669853 MULTI CID FTMS 0 0 0 14804 370049.90625 0.9410787711009844 1 -0.0529861450195312 14 4 {I|L}{M(Oxidation (M))|F}TM 4 -1 14.614 0.0 0.0 2.599 0.0 0.0 52.0700031132268 0.0 52.0700031132268 0.0 1.426675035687314 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}TM 2.599 - 50 + 1 1.252 36657.3 1.0 9929 4887 14804 HBL1_DMSO_200M_050219_2,14818 HBL1_DMSO_200M_050219_2,14818, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14819 78.028 67.0 653970.0 25 0 36045.0 -1 PELLKLMCE 9 85 566.7918802971816 1131.569207661163 2 566.7904540896416 MULTI CID FTMS 0 0 0 14804 379016.34375 0.4248729026921166 -3 0.4042892456054687 15 Carbamidomethyl (C) _PELLKLMC(Carbamidomethyl (C))E_ ENSG00000114331|ENST00000326793|ACAP2;ENSG00000131584|ENST00000354700|ACAP3;ENST00000467278.5_1_1:1228946-1234134:-|nuORF;ENST00000475905.5_1_3:195016371-195022834:-|nuORF;nc|ENSG00000131584|Q96P50-1|ACAP3;nc|ENSG00000131584|Q96P50-4|ACAP3 10.823927491677226 0.5436922275383211 4 [EP]{I|L}K{I|L}T[CS]{[QN]|[E{I|L}]|[KN]} 10 -1 + 33.059 0.0 0.0 2.9215 2.9215 45.75 0.0 0.0 0.0 2.903635500493536 3.2462652752411785 2.903635500493536 0.0 0 0.0 0.958607314841775 0.3807196863200844 0.0 [EP]{I|L}K{I|L}T[CS]{[QN]|[E{I|L}]|[KN]};[EP]{I|L}K{I|L}T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]};[EP]{I|L}K{I|L}[C(Carbamidomethyl (C))M]{[QN]|[E{I|L}]|[KN]};[K{I|L}]EP{I|L}T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]};[K{I|L}]EP{I|L}T[CS]{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[CS]T{I|L}P[VG][VP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[CS]T{I|L}[RP][VP];[K{I|L}]EP{I|L}[C(Carbamidomethyl (C))M]{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}P{I|L}T[CS]{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}P{I|L}T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]} 2.9215;2.9215;2.3443;1.9188;1.9188;1.7231;1.5636;1.3415;1.3206;1.3206 -;-;-;-;-;-;-;-;-;- 206 1 1.252 45319.0 1.0 9930 4887 14804 HBL1_DMSO_200M_050219_2,14819 HBL1_DMSO_200M_050219_2,14819,PELLKLMCE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14820 78.033 247.0 278680.0 25 0 21142.0 -1 0 71 994.4479022310828 1986.881251528965 2 994.9503051638604 MULTI CID FTMS 0 0 0 14804 335305.625 0.8350024645918233 1 -0.0529861450195312 16 4 [YQ]{I|L}ENN[NS]YDE{I|L} 12 -1 37.534 0.0 0.0 1.8891 0.0 0.0 0.0 501.23718349601535 501.23718349601535 0.0371440516030929 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.8494850021680094 [YQ]{I|L}ENN[NS]YDE{I|L} 1.8891 - 727 1 1.252 54259.3 1.0 9931 4887 14804 HBL1_DMSO_200M_050219_2,14820 HBL1_DMSO_200M_050219_2,14820, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14821 78.037 208.0 352310.0 25 0 30126.0 + 3699 DAFLASESL 9 73 952.4613958332212 951.4541193666212 1 952.461962878704 MULTI CID FTMS 0 0 0 14804 316705.4375 0.4305055047975239 1 -0.0529861450195312 17 Unmodified _DAFLASESL_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 96.28474662873226 0.0124266067997264 4 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}ASES{I|L} 9 0 + 80.802 0.0 0.0 8.4925 8.4925 88.959 0.0 0.0 0.0 14.259687322722812 14.09256854528806 14.09256854528806 6.064921830680703 0 1.0356668758921828 1.5228787452803376 1.7134679910804405 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}ASES{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}A{I|L}SES{I|L};{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}ASES{I|L};{[MS]|[{M(Oxidation (M))|F}A]}D{I|L}ASES{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ADASES{I|L};{[MS]|[{M(Oxidation (M))|F}A]}DA{I|L}SES{I|L};{[DA]|[EG]}{I|L}A{M(Oxidation (M))|F}SES{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}DASES{I|L};[{I|L}A]{M(Oxidation (M))|F}DASES{I|L};[{I|L}A]D{M(Oxidation (M))|F}ASES{I|L} 8.4925;7.8551;7.4924;6.9938;6.4414;6.3563;6.3535;6.3101;5.9399;5.6235 +;-;-;-;-;-;-;-;-;- + 1201 1 1.252 53163.8 1.0 9932 4887 14804 HBL1_DMSO_200M_050219_2,14821 HBL1_DMSO_200M_050219_2,14821,DAFLASESL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14822 78.042 257.0 598560.0 25 0 59339.0 + 30825 RIIEENIPEL 10 111 613.3426693926101 1224.67078585202 2 613.3428832888603 MULTI CID FTMS 0 0 0 14804 285954.40625 0.4353666274431663 -2 0.2232208251953125 18 Unmodified _RIIEENIPEL_ ENSG00000162231|ENST00000294172|NXF1;ENST00000531579.5_1_11:62564685-62568887:-|nuORF;nc|ENSG00000162231|Q9UBU9-2|NXF1 51.41523569358685 0.0718446036348414 4 {[QN]|[E{I|L}]|[KN]}[R{I|L}]EN{I|L}PE{I|L} 10 2 + 49.781 0.0 0.0 4.0648 4.0648 83.021 0.0 0.0 0.0 5.919565357321979 22.33352578526297 5.919565357321979 49.78080073422991 0 1.3182503180159344 0.8860566476931632 0.0 0.7614393726401688 {[QN]|[E{I|L}]|[KN]}[R{I|L}]EN{I|L}PE{I|L} 4.0648 - 240 1 1.252 117144.8 1.0 9933 4887 14804 HBL1_DMSO_200M_050219_2,14822 HBL1_DMSO_200M_050219_2,14822,RIIEENIPEL True True RIIEENIPEL 78.041732 613.34288328886 4529027.5 14804.0 ENST00000531579.5_1_11:62564685-62568887:-|nuORF;;ENSG00000162231|ENST00000294172|NXF1;;nc|ENSG00000162231|Q9UBU9-2|NXF1 5.248745600382487 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14823 78.047 301.0 289710.0 25 0 19087.0 + 45855 YYQEYPMSI 9 121 597.2626314400209 1192.5107099468416 2 597.2633544802666 MULTI CID FTMS 0 0 0 14804 239795.578125 0.6705188980134672 -2 0.2232208251953125 19 Unmodified _YYQEYPMSI_ ENSG00000138074|ENST00000310574|SLC5A6;ENST00000488743.6_1_2:27425876-27434347:-|nuORF 65.23502041540118 0.0231836506122253 4 YYQEYP 6 3 50.996 0.0 0.0 4.2764 0.0 0.0 0.0 346.1428259959229 346.1428259959229 27.051120522087032 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.5629529932484498 + YYQEYP 4.2764 + + 432 1 1.252 70032.7 1.0 9934 4887 14804 HBL1_DMSO_200M_050219_2,14823 HBL1_DMSO_200M_050219_2,14823,YYQEYPMSI True True YYQEYPMSI 78.047245 597.263354480267 3825107.0 14804.0 ENSG00000138074|ENST00000310574|SLC5A6;;ENST00000488743.6_1_2:27425876-27434347:-|nuORF 7.041990280151367 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14824 78.052 279.0 444350.0 25 0 56437.0 + 11997 GPGPVQLLL 9 140 447.2760921142962 892.5376312953924 2 447.2764465212822 MULTI CID FTMS 0 0 0 14804 191316.34375 0.5728757306662302 7 -0.700408935546875 20 Unmodified _GPGPVQLLL_ REV__ENST00000266643.5_1_12:58150815-58152358:+|nuORF 46.92087301778293 0.0471210510596396 4 [{I|L}P]NPVQ{I|L}{I|L} 8 -1 + 54.848 0.0 0.0 6.1452 6.1452 72.661 0.0 0.0 0.0 8.696662315049942 16.40978057358332 8.696662315049942 0.1230450566754512 0 0.5 1.2218487496163564 0.0 0.3807196863200844 [{I|L}P]NPVQ{I|L}{I|L};[{I|L}P]NPN{I|L}{I|L}{I|L};[{I|L}P]NNP{I|L}{I|L}{I|L};[NP]P{I|L}VQ{I|L}{I|L};[NP]P{I|L}N{I|L}{I|L}{I|L};[{I|L}P]NPV[AG]{I|L}{I|L};[{I|L}P]GGPVQ{I|L}{I|L};[{I|L}P]GGPN{I|L}{I|L}{I|L};[{I|L}P]NPGG{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}Q{I|L}{I|L} 6.1452;6.1314;5.2596;5.1708;5.157;5.1075;5.1075;5.0937;5.0937;4.65 -;-;-;-;-;-;-;-;-;- 565 1 1.252 100125.2 1.0 9935 4887 14804 HBL1_DMSO_200M_050219_2,14824 HBL1_DMSO_200M_050219_2,14824,GPGPVQLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14826 78.057 6.0 11064000.0 25 0 1725400.0 + 2988 AVIGDVIRV 9 65 471.2925794486314 940.5706059640628 2 471.2929260134697 MULTI CID FTMS 0 0 0 14825 9851984.0 1.0 0 0.0 1 Unmodified _AVIGDVIRV_ ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21 41.8396318013385 0.0653578398400075 4 {[VA]|[{I|L}G]}{I|L}GDV{I|L}[RV] 9 0 + 69.671 0.0 0.0 7.4073 7.4073 87.661 0.0 0.0 0.0 59.21327198560853 9.889917747712644 9.889917747712644 6.817496819840656 0 0.805462187404089 2.0 0.0 0.5752574989159953 + + {[VA]|[{I|L}G]}{I|L}GDV{I|L}[RV];{[VA]|[{I|L}G]}VADV{I|L}[RV];{[VA]|[{I|L}G]}{I|L}V[DG]{I|L}[RV];{[VA]|[{I|L}G]}V{I|L}[DG]{I|L}[RV] 7.4073;6.6825;5.8185;5.0937 +;-;-;- + 168 + 1 1.252 58166.4 1.0 9936 4888 14825 HBL1_DMSO_200M_050219_2,14826 HBL1_DMSO_200M_050219_2,14826,AVIGDVIRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14827 78.058 14.0 4304900.0 25 0 382420.0 + 13626 HPPSHWPLI 9 89 542.2906042372043 1082.5666555412083 2 542.2908813357353 MULTI CID FTMS 0 0 0 14825 3562200.5 0.6052976364899505 -5 0.5169219970703125 2 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 74.42276476219924 0.019389277360085 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L} 9 2 + 73.972 0.0 0.0 6.833 6.833 75.619 0.0 0.0 0.0 5.253312076568903 39.49142170447776 5.253312076568903 0.3171830909637521 0 1.8996498648046136 0.0 0.6382104921644451 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWPH{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWP{I|L}H{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PP{I|L}H{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPP{I|L}H{I|L} 6.833;6.8037;6.5257;6.2405;5.741;5.5006;5.4629;4.9486;4.7082;4.6705 -;-;-;-;-;-;-;-;-;- 653 1 1.252 52667.8 1.0 9937 4888 14825 HBL1_DMSO_200M_050219_2,14827 HBL1_DMSO_200M_050219_2,14827,HPPSHWPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14828 78.059 18.0 3331600.0 25 0 340050.0 15529 IPVLANFIV 9 91 493.30756668585485 984.6005804385096 2 493.3083679080009 MULTI CID FTMS 0 0 0 14825 2745796.25 0.459431074703414 24 -2.52459716796875 3 Unmodified _IPVLANFIV_ ENSG00000146085|ENST00000274813|MMUT 21.74664581756881 0.2544899275067181 4 {I|L}P 2 7 43.711 0.0 0.0 4.4395 0.0 0.0 0.0 771.4422993162924 771.4422993162924 18.886124101697 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.4395 + + 332 + 1 1.252 54228.8 1.0 9938 4888 14825 HBL1_DMSO_200M_050219_2,14828 HBL1_DMSO_200M_050219_2,14828,IPVLANFIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14829 78.061 44.0 1505600.0 25 0 135140.0 + -1 HFSLMVIEL 9 100 552.7894294725178 1103.5643060118357 2 552.7902099490166 MULTI CID FTMS 0 0 0 14825 647309.3125 0.3379078192587198 -1 0.0529861450195312 4 Oxidation (M) _HFSLM(Oxidation (M))VIEL_ REV__ENSG00000103264|ENST00000311635|FBXO31;REV__nc|ENSG00000103264|Q5XUX0-2|FBXO31 25.399314129420983 0.2080152500878129 4 {I|L}VE{I|L} 4 -1 40.433 0.0 0.0 3.6639 0.0 0.0 631.2751607008245 0.0 631.2751607008245 0.0 20.52378753635658 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L}VE{I|L} 3.6639 - 191 1 1.252 56481.9 1.0 9939 4888 14825 HBL1_DMSO_200M_050219_2,14829 HBL1_DMSO_200M_050219_2,14829,HFSLMVIEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14830 78.064 162.0 623850.0 25 0 55017.0 -1 0 95 981.801040984922 2942.381293554966 3 982.136767566204 MULTI CID FTMS 0 0 0 14825 494553.0625 0.8945135530489555 1 -0.1336288452148437 5 4 [MN]M[EP]MND 8 -1 42.937 0.0 0.0 1.4593 0.0 0.0 0.0 1976.98745886821 1976.98745886821 24.74932183384788 0.0 0.0 0.0 0 1.0044321917401078 2.0 0.5 0.4247425010840047 [MN]M[EP]MND 1.4593 - 289 + 1 1.252 74759.0 1.0 9940 4888 14825 HBL1_DMSO_200M_050219_2,14830 HBL1_DMSO_200M_050219_2,14830, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14831 78.066 70.0 923340.0 25 0 79118.0 + 34501 SMTLAIHEI 9 99 507.7691845671117 1013.5238162010236 2 507.7687560915947 MULTI CID FTMS 0 0 0 14825 449147.8125 1.0 0 0.0 6 Unmodified _SMTLAIHEI_ ENSG00000143753|ENST00000323699|DEGS1 68.08070601005525 0.0218408846571049 4 {[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A{I|L}HE{I|L} 9 0 + 83.351 0.0 0.0 8.2239 8.2239 96.631 0.0 0.0 0.0 48.93099742355549 25.96440129352284 25.96440129352284 28.79493455131809 0 1.086696871556164 2.0 1.305462187404089 0.0 + + {[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A{I|L}HE{I|L};{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[HK]N{I|L};{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A{I|L}[QP][PG];{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[QP]APV;{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[HK]QV;{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[QP][PG]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[PG][QP]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[PG]AAPV;{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[PG]A[PG]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[HK]GG{I|L} 8.2239;5.3828;4.945;4.7676;4.7545;4.734;4.734;4.6487;4.615;4.4743 +;-;-;-;-;-;-;-;-;- + 723 + 1 1.252 56292.7 1.0 9941 4888 14825 HBL1_DMSO_200M_050219_2,14831 HBL1_DMSO_200M_050219_2,14831,SMTLAIHEI True True SMTLAIHEI 78.065516 507.768756091595 8040953.0 14825.0 ENSG00000143753|ENST00000323699|DEGS1 5.725352605183919 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14832 78.068 124.0 479240.0 25 0 53197.0 + 16554 KAYTDELVEL 10 64 590.8069392217683 1179.5993255103365 2 590.8087646365166 MULTI CID FTMS 0 0 0 14825 402839.0 0.9847801506438808 1 -0.1336288452148437 7 Unmodified _KAYTDELVEL_ ENSG00000130382|ENST00000252674|MLLT1 33.4449034751529 0.2267874087365337 4 {NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KG]{I|L}VE{I|L} 10 5 + 52.024 0.0 0.0 4.4103 4.4103 80.345 0.0 0.0 0.0 4.461499616092652 36.539843494255 4.461499616092652 9.827796776480469 0 0.3807196863200844 1.3010299956639813 0.7302046884880937 0.0 {NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KG]{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KG]V{I|L}E{I|L};[{M(Oxidation (M))|F}V][KC]DD{I|L}VE{I|L};[{M(Oxidation (M))|F}V][KC]{I|L}DDVE{I|L};[{M(Oxidation (M))|F}V][KC]DDV{I|L}E{I|L} 4.4103;3.5772;2.6477;2.6477;1.8146 -;-;-;-;- 91 1 1.252 51856.7 1.0 9942 4888 14825 HBL1_DMSO_200M_050219_2,14832 HBL1_DMSO_200M_050219_2,14832,KAYTDELVEL False True KAYTDELVEL 78.068074 590.808764636517 3523848.25 14825.0 ENSG00000130382|ENST00000252674|MLLT1 6.024988333384196 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14833 78.081 768.0 435490.0 25 0 53514.0 + 21816 LPNLQTVTV 9 100 984.5706620090954 983.5633855424952 1 984.5743896365166 MULTI CID FTMS 0 0 0 14825 262368.5 0.8922853347529198 -2 0.21905517578125 8 Unmodified _LPNLQTVTV_ ENSG00000172845|ENST00000310015|SP3;nc|ENSG00000172845|Q02447-2|SP3;nc|ENSG00000172845|Q02447-3|SP3;nc|ENSG00000172845|Q02447-4|SP3;nc|ENSG00000172845|Q02447-5|SP3;nc|ENSG00000172845|Q02447-6|SP3 103.41943736471065 0.0091853052135676 4 [{I|L}P]NQ{I|L}TVTV 9 2 + 99.285 0.0 0.0 10.094 10.094 85.337 0.0 0.0 0.0 5.6246936830415 14.973024840566469 5.6246936830415 2.8123468415207498 0 0.8287886595888969 1.5228787452803376 1.3494850021680094 1.066901560044258 [{I|L}P]NQ{I|L}TVTV;[{I|L}P]N{I|L}QTVTV;[{I|L}P]NQ{I|L}S{I|L}TV;[{I|L}P]NQT{I|L}VTV;{[QV]|[N{I|L}]|[RA]|[KV]}PQ{I|L}TVTV;[{I|L}P]N{I|L}QS{I|L}TV;{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}QTVTV;[{I|L}P]GGQ{I|L}TVTV;[{I|L}P]N[AG]{I|L}TVTV;[{I|L}P]NQTV{I|L}TV 10.094;9.8084;9.5827;9.527;9.5225;9.2967;9.2366;9.1582;9.1582;9.0153 -;+;-;-;-;-;-;-;-;- + 7803 1 1.252 218722.9 1.0 9943 4888 14825 HBL1_DMSO_200M_050219_2,14833 HBL1_DMSO_200M_050219_2,14833,LPNLQTVTV True True LPNLQTVTV 78.081407 984.574389636517 5688384.0 14825.0 nc|ENSG00000172845|Q02447-3|SP3;;nc|ENSG00000172845|Q02447-2|SP3;;nc|ENSG00000172845|Q02447-6|SP3;;nc|ENSG00000172845|Q02447-5|SP3;;nc|ENSG00000172845|Q02447-4|SP3;;ENSG00000172845|ENST00000310015|SP3 7.064322471618652 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14834 78.087 318.0 449870.0 25 0 40545.0 5379 DLKLPKELL 9 144 356.89342449488106 0 356.8935424685478 PEAK CID FTMS 0 0 0 14825 254464.90625 1.0 0 0.0 9 Unmodified _DLKLPKELL_ ENST00000503823.5_2_4:20255177-20255336:+|nuORF 16.565877749689598 0.2369545154010214 4 {I|L}{I|L}C 3 7 7.7469 0.0 0.0 1.0884 0.0 0.0 129.3987421001387 250.1815432184204 379.5802853185591 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}C 1.0884 - 42 + 1 1.252 118338.5 1.0 9944 4888 14825 HBL1_DMSO_200M_050219_2,14834 HBL1_DMSO_200M_050219_2,14834,DLKLPKELL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14835 78.101 800.0 425470.0 25 0 64799.0 + -1 NFPNGVTDF 9 139 1010.4615274856736 0 1010.462634265423 PEAK CID FTMS 0 0 0 14825 245068.28125 0.8133368540453635 -2 0.21905517578125 10 nc|ENSG00000083312|Q92973-2|TNPO1;ENSG00000083312|ENST00000337273|TNPO1 4 {M(Oxidation (M))|F}N{M(Oxidation (M))|F}DEK 6 -1 43.701 0.0 0.0 2.1646 0.0 0.0 1027.469977723497 208.07293115787343 1235.5429088813707 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2658715643802765 1.9093793813122064 {M(Oxidation (M))|F}N{M(Oxidation (M))|F}DEK 2.1646 - 7587 + 1 1.252 215747.9 0.9900000095367432 9945 4888 14825 HBL1_DMSO_200M_050219_2,14835 HBL1_DMSO_200M_050219_2,14835, False False NFPNGVTDF 78.101051 1010.46263426542 4428906.0 14825.0 nc|ENSG00000083312|Q92973-2|TNPO1;;ENSG00000083312|ENST00000337273|TNPO1 7.076346556345622 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14836 78.105 216.0 634070.0 25 0 54082.0 + + 7353 NAAIIMKI 8 122 437.756913617115 873.49927430103 2 437.7569152712822 MULTI CID FTMS 0 0 0 14825 226024.484375 0.3333689235553373 -1 0.0529861450195312 11 Unmodified _EGAIMLLK_ ENSG00000197045|ENST00000358056|GMFB;ENST00000554682.1_1_14:54948855-54955663:-|nuORF;ENST00000554163.5_1_14:54948056-54950476:-|nuORF 32.30548876998284 0.3644845974844379 4 {[DA]|[EG]}A{I|L}{I|L}MK{I|L} 8 -1 + 71.904 0.0 0.0 8.2317 8.2317 86.757 0.0 0.0 0.0 17.992997296092277 4.559319556497243 4.559319556497243 4.559319556497243 0 1.424742501084005 1.5228787452803376 0.0 0.2742275032520141 {[DA]|[EG]}A{I|L}{I|L}MK{I|L};{[DA]|[EG]}A{I|L}{I|L}M{I|L}K;{[DA]|[EG]}A{I|L}{I|L}{I|L}MK 8.2317;7.7097;6.5482 -;-;- 197 + 1 1.252 111759.3 1.0 9946 4888 14825 HBL1_DMSO_200M_050219_2,14836 HBL1_DMSO_200M_050219_2,14836,EGAIMLLK False False NAAIIMKI 78.105126 437.756915271282 0.0 14825.0 ENSG00000197045|ENST00000358056|GMFB;;ENST00000554682.1_1_14:54948855-54955663:-|nuORF;;ENST00000554163.5_1_14:54948056-54950476:-|nuORF 0.4795968333880107 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14837 78.119 800.0 355320.0 25 0 25203.0 + 35895 SVLWPYLWEQL 11 160 717.3795098439758 1432.7444667547516 2 717.3802368044853 MULTI CID FTMS 0 0 0 14825 211950.375 0.3581786029221416 -2 0.21905517578125 12 Unmodified _SVLWPYLWEQL_ REV__ENST00000336714.7_1_20:18491522-18491615:+|nuORF 24.99096001346401 0.505407273373304 4 [VS]{I|L}PDDSSK[{I|L}P]Y{I|L} 13 -1 + 83.481 0.0 0.0 5.8267 5.8267 88.071 0.0 0.0 0.0 16.027002785438697 11.29914599820478 11.29914599820478 16.361791744765625 0 0.8807196863200843 1.6989700043360187 0.75 0.0 [VS]{I|L}PDDSSK[{I|L}P]Y{I|L};[VS]{I|L}PD{[C(Carbamidomethyl (C))E]|[WC]}K[{I|L}P]Y{I|L};[VS]{I|L}PD[W{M(Oxidation (M))|F}]SKNQ{I|L};[VS]{I|L}PDDS[K{I|L}][PS]Y{I|L};[VS]{I|L}PD[W{M(Oxidation (M))|F}]SKGGQ{I|L};[VS]{I|L}PD[W{M(Oxidation (M))|F}]SKA[NG]{I|L};[VS]{I|L}PD[W{M(Oxidation (M))|F}]SKN[AG]{I|L};[VS]{I|L}PD[W{M(Oxidation (M))|F}]SKQQV;[VS]{I|L}P[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))E]|[WC]}KNQ{I|L};[VS]{I|L}PD[W{M(Oxidation (M))|F}]SKA{[QG]|[NA]}V 5.8267;4.6847;4.4119;4.2721;3.7768;3.6463;3.5498;3.4558;3.3132;3.2891 -;-;-;-;-;-;-;-;-;- 3198 + 1 1.252 200499.8 0.959999978542328 9947 4888 14825 HBL1_DMSO_200M_050219_2,14837 HBL1_DMSO_200M_050219_2,14837,SVLWPYLWEQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14838 78.122 146.0 424000.0 25 0 44444.0 11841 GLQWGLPSL 9 92 485.7719108188399 969.5292687044798 2 485.7743713259697 MULTI CID FTMS 0 0 0 14825 191231.65625 0.0899316213099368 4 -0.4477615356445312 13 Unmodified _GLQWGLPSL_ ENSG00000160796|ENST00000450053|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 26.88365393820708 0.1891292719743517 4 TEPSP{I|L} 6 7 35.341 0.0 0.0 3.6452 0.0 0.0 327.21751440936106 0.0 327.21751440936106 0.0 14.775652430583676 0.0 0.0 0 0.0 0.0 0.8252574989159953 0.0 TEPSP{I|L} 3.6452 - 484 + 1 1.252 54581.2 1.0 9948 4888 14825 HBL1_DMSO_200M_050219_2,14838 HBL1_DMSO_200M_050219_2,14838,GLQWGLPSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14839 78.128 268.0 284780.0 25 0 61120.0 + 23113 LSPDPHLLV 9 107 495.7859612047096 989.5573694762192 2 495.7860900759697 MULTI CID FTMS 0 0 0 14825 168107.953125 1.0 0 0.0 14 Unmodified _LSPDPHLLV_ REV__ENST00000400068.7_2_20:1918826-1919048:+|nuORF 44.40701690623563 0.0526327925666318 4 E{I|L}V 3 -1 38.188 0.0 0.0 3.8591 0.0 0.0 630.354803284355 0.0 630.354803284355 0.0 23.25257498915996 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 E{I|L}V 3.8591 - 269 1 1.252 63169.4 1.0 9949 4888 14825 HBL1_DMSO_200M_050219_2,14839 HBL1_DMSO_200M_050219_2,14839,LSPDPHLLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14840 78.142 800.0 418750.0 25 0 46035.0 38775 TVDFYFEEV 9 216 574.7589706427858 1147.5033883523715 2 574.7581664919853 MULTI CID FTMS 0 0 0 14825 145341.09375 0.3122240256045834 34 -3.59954833984375 15 Unmodified _TVDFYFEEV_ ENSG00000196353|ENST00000429747|CPNE4;nc|ENSG00000196353|Q96A23-2|CPNE4 15.847184025352805 0.4077185912009129 4 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}[Y{I|L}]ME{M(Oxidation (M))|F} 9 4 + 43.923 0.0 0.0 3.8277 3.8277 79.834 0.0 0.0 0.0 22.43501263708417 7.759621790487685 7.759621790487685 14.490925311194182 0 0.3054621874040891 1.6989700043360187 0.8807196863200843 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}[Y{I|L}]ME{M(Oxidation (M))|F};{[TV]|[{I|L}S]}HHV[C(Carbamidomethyl (C))H]C(Carbamidomethyl (C))V;{[TV]|[{I|L}S]}VHH[C(Carbamidomethyl (C))H]C(Carbamidomethyl (C))V;{[TV]|[{I|L}S]}WWE{[CP]|[EA]}EV;{[TV]|[{I|L}S]}WW[NS]PC(Carbamidomethyl (C))V;[YN]RHM{[CP]|[EA]}EV;{[TV]|[{I|L}S]}WWE{[CP]|[EA]}D{I|L};{[TV]|[{I|L}S]}WWE[HQ]Y;{[TV]|[{I|L}S]}WWE[YQ]H;[YN]RH{[WN]|[YH]}C(Carbamidomethyl (C))V 3.8277;2.5649;2.1491;1.9848;1.9513;1.5851;1.4372;1.3619;1.287;1.1799 -;-;-;-;-;-;-;-;-;- 622 + 1 1.252 251548.7 0.7200000286102295 9950 4888 14825 HBL1_DMSO_200M_050219_2,14840 HBL1_DMSO_200M_050219_2,14840,TVDFYFEEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14841 78.15 455.0 456390.0 25 0 55392.0 + 41496 VPMPYTLKV 9 197 524.3002278712416 1046.5859028092832 2 524.8040038943291 MULTI CID FTMS 0 0 0 14825 159035.0 0.281624732188887 -3 0.2762069702148437 16 Unmodified _VPMPYTLKV_ ENSG00000116701|ENST00000367535|NCF2;nc|ENSG00000116701|P19878-2|NCF2;nc|ENSG00000116701|P19878-3|NCF2;nc|ENSG00000116701|P19878-4|NCF2 51.629811660486645 0.0367964933207742 4 VPMPYT{I|L}KV 9 0 + 60.338 0.0 0.0 5.7652 5.7652 79.125 0.0 0.0 0.0 25.64158814514549 4.472866586712769 4.472866586712769 4.472866586712769 0 1.048455006504028 1.154901959985743 0.25 0.4076960356474643 + + VPMPYT{I|L}KV;VPMPYTVK{I|L};VPMPYT{I|L}VK;VPMPYTV{I|L}K;VPMPY[K{I|L}]TV;VPMPY[K{I|L}]S{I|L};VP[{M(Oxidation (M))|F}T][K{I|L}]{M(Oxidation (M))|F}PV;VP[{M(Oxidation (M))|F}T]R[NS]KV;VP[{M(Oxidation (M))|F}T]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PKV;[VP]{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))K][RK] 5.7652;5.3378;5.2388;4.9308;4.3658;4.2464;2.369;2.2211;2.0529;1.7399 +;-;-;-;-;-;-;-;-;- + 1703 + 1 1.252 167710.8 1.0 9951 4888 14825 HBL1_DMSO_200M_050219_2,14841 HBL1_DMSO_200M_050219_2,14841,VPMPYTLKV True True VPMPYTLKV 78.149894 524.804003894329 17443354.0 14825.0 nc|ENSG00000116701|P19878-4|NCF2;;nc|ENSG00000116701|P19878-2|NCF2;;ENSG00000116701|ENST00000367535|NCF2;;nc|ENSG00000116701|P19878-3|NCF2 7.260191440582275 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14842 78.164 800.0 194610.0 25 0 18479.0 + 30631 RFLDKALEL 9 189 368.885321212451 1103.634134237553 3 368.8846618533134 MULTI CID FTMS 0 0 0 14825 119986.125 0.1409858532976842 3 -0.3657760620117187 17 Unmodified _RFLDKALEL_ ENSG00000135069|ENST00000376588|PSAT1 20.41453444215458 0.284085796332423 4 [R{M(Oxidation (M))|F}]{I|L}DKA{I|L}E{I|L} 9 0 + 30.244 0.0 0.0 2.7404 2.7404 72.622 0.0 0.0 0.0 5.642492736872601 14.759490726017436 5.642492736872601 8.182503180159348 0 0.3182503180159344 0.0 0.5 0.0 + + [R{M(Oxidation (M))|F}]{I|L}DKA{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AMG{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AK[KA][NS]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AM{I|L}G{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AMG{I|L}{[VA]|[{I|L}G]}G{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AM{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AK[W{I|L}][DV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AM{I|L}G{[VA]|[{I|L}G]}G{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AKY[PG][VP] 2.7404;1.999;1.7293;1.4071;1.124;0.64137;0.63678;0.53212;0.41321;0.2685 +;-;-;-;-;-;-;-;-;- + 191 1 1.252 124753.3 0.4799999892711639 9952 4888 14825 HBL1_DMSO_200M_050219_2,14842 HBL1_DMSO_200M_050219_2,14842,RFLDKALEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14843 78.172 413.0 292150.0 25 0 19344.0 + 18496 KYNIMLVRL 9 143 583.3413807706337 1164.6682086080673 2 583.3419677615166 MULTI CID FTMS 0 0 0 14825 94255.09375 0.6144875540397928 -1 0.0529861450195312 18 Oxidation (M) _KYNIM(Oxidation (M))LVRL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 56.17704186161178 0.0281986971544335 4 KYN{I|L}{M(Oxidation (M))|F}{I|L}VR{I|L} 9 0 + 59.6 0.0 0.0 5.1173 5.1173 81.975 0.0 0.0 0.0 14.247425010840049 13.258953961038712 13.258953961038712 9.208187539523747 0 1.5044321917401078 0.0 0.0 0.2396518287104437 + + KYN{I|L}{M(Oxidation (M))|F}{I|L}VR{I|L};KYGG{I|L}{M(Oxidation (M))|F}{I|L}VR{I|L};KYN{I|L}{M(Oxidation (M))|F}{I|L}{I|L}RV;KYGG{I|L}{M(Oxidation (M))|F}{I|L}{I|L}RV;KYN{I|L}R[Y{I|L}]PV;{I|L}[YE]{I|L}{M(Oxidation (M))|F}{I|L}VR{I|L};KY[YQ][VP]VR{I|L};[YK][KA]R{I|L}NV{[CA]|SS};KYN{I|L}[VG][Y{I|L}]PV;KYGG{I|L}R[Y{I|L}]PV 5.1173;4.3267;3.9789;3.1883;3.0189;2.6914;2.6044;2.4244;2.2283;2.2283 +;-;-;-;-;-;-;-;-;- + 762 + 1 1.252 92816.9 1.0 9953 4888 14825 HBL1_DMSO_200M_050219_2,14843 HBL1_DMSO_200M_050219_2,14843,KYNIMLVRL True False KYNIMLVRL 78.172269 583.341967761517 1341301.875 14825.0 nc|ENSG00000156261|P50990-2|CCT8;;nc|ENSG00000156261|P50990-3|CCT8;;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;;ENSG00000156261|ENST00000286788|CCT8 4.929711977640788 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14844 78.186 800.0 356380.0 25 0 25012.0 -1 0 132 647.0245420635526 1938.0517967908577 3 647.3594848513603 MULTI CID FTMS 0 0 0 14825 98836.828125 0.842558469574363 -1 0.0529861450195312 19 4 {I|L}P{I|L}{I|L} 4 -1 53.175 0.0 0.0 2.7438 0.0 0.0 0.0 1498.731777964743 1498.731777964743 16.86513742478894 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 {I|L}P{I|L}{I|L} 2.7438 - 2470 + 1 1.252 213246.8 0.6200000047683716 9954 4888 14825 HBL1_DMSO_200M_050219_2,14844 HBL1_DMSO_200M_050219_2,14844, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14846 78.191 8.7 5577900.0 25 0 411640.0 + 2293 AQIDHYLGL 9 75 515.2717764716845 1028.5290000101688 2 515.2722656130791 MULTI CID FTMS 0 0 0 14845 5510741.0 1.0 0 0.0 1 Unmodified _AQIDHYLGL_ ENSG00000115310|ENST00000337526|RTN4;ENST00000485749.1_1_2:55200294-55201100:-|nuORF;nc|ENSG00000115310|Q9NQC3-2|RTN4;nc|ENSG00000115310|Q9NQC3-3|RTN4;nc|ENSG00000115310|Q9NQC3-4|RTN4;nc|ENSG00000115310|Q9NQC3-5|RTN4;nc|ENSG00000115310|Q9NQC3-6|RTN4 36.12702656103203 0.0967173616627612 4 [HD]{I|L}YGAA{I|L}G{I|L} 10 6 + 28.874 0.0 0.0 2.8073 2.8073 45.546 0.0 0.0 0.0 0.0 5.8534811358448735 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 [HD]{I|L}YGAA{I|L}G{I|L};{[WN]|[YH]}D{I|L}{I|L}GAAG{I|L};[HD]{I|L}Y{I|L}GAAG{I|L};{[WN]|[YH]}D{I|L}GAA{I|L}G{I|L};[HD]{I|L}Y[QA]{I|L}G{I|L};{[WN]|[YH]}D{I|L}[QA]{I|L}G{I|L};{[WN]|[YH]}D{I|L}{I|L}[QA]G{I|L};[HD]{I|L}Y{I|L}[QA]G{I|L};[HD]Y{I|L}{I|L}GAAG{I|L};[HD]Y{I|L}GAA{I|L}G{I|L} 2.8073;2.8073;2.8073;2.8073;2.6361;2.6361;2.6361;2.6361;2.5146;2.5146 -;-;-;-;-;-;-;-;-;- 283 1 1.261 42018.4 1.0 9955 4889 14845 HBL1_DMSO_200M_050219_2,14846 HBL1_DMSO_200M_050219_2,14846,AQIDHYLGL True True AQIDHYLGL 78.19069 515.272265613079 46044868.0 14845.0 nc|ENSG00000115310|Q9NQC3-2|RTN4;;nc|ENSG00000115310|Q9NQC3-3|RTN4;;ENSG00000115310|ENST00000337526|RTN4;;nc|ENSG00000115310|Q9NQC3-5|RTN4;;ENST00000485749.1_1_2:55200294-55201100:-|nuORF;;nc|ENSG00000115310|Q9NQC3-6|RTN4;;nc|ENSG00000115310|Q9NQC3-4|RTN4 5.480478763580322 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14847 78.192 18.0 1739600.0 25 0 218180.0 29358 QKEDILKHRV 10 59 633.3691586956885 1264.723764458177 2 633.3699218630791 MULTI CID FTMS 0 0 0 14845 1290623.875 0.6414980710928353 2 -0.232147216796875 2 Unmodified _QKEDILKHRV_ ENSG00000198265|ENST00000358691|HELZ;nc|ENSG00000198265|P42694-2|HELZ 2.735195868890462 0.713984610296514 4 {I|L}DE 3 9 13.188 0.0 0.0 1.0427 0.0 0.0 157.09552163421523 747.4546602838499 904.5501819180652 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DE 1.0427 - 30 + 1 1.261 31915.1 1.0 9956 4889 14845 HBL1_DMSO_200M_050219_2,14847 HBL1_DMSO_200M_050219_2,14847,QKEDILKHRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14848 78.193 26.0 2169200.0 25 0 205190.0 + 25337 NALDKVLSV 9 90 479.78160281544143 957.5486526976828 2 479.7820922732353 MULTI CID FTMS 0 0 0 14845 1900373.25 0.8543002817400972 -1 0.1336288452148437 3 Unmodified _NALDKVLSV_ ENSG00000159063|ENST00000299626|ALG8;ENST00000524925.1_1_11:77817969-77825348:-|nuORF;nc|ENSG00000159063|Q9BVK2-2|ALG8 49.55428908609986 0.0413471690215031 4 {[QG]|[NA]}{I|L}D 4 5 41.995 0.0 0.0 4.3857 0.0 0.0 0.0 541.3360079400999 541.3360079400999 -6.131674952134105 0.0 -6.131674952134105 0.0 0 0.8807196863200843 2.0 0.0 0.0 + {[QG]|[NA]}{I|L}D 4.3857 + + 940 + 1 1.261 51704.0 1.0 9957 4889 14845 HBL1_DMSO_200M_050219_2,14848 HBL1_DMSO_200M_050219_2,14848,NALDKVLSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14849 78.194 33.0 1476200.0 25 0 198330.0 + 35958 SVPNKDVFQEL 11 64 638.332530858804 1274.650508784408 2 638.3332397341728 MULTI CID FTMS 0 0 0 14845 1554601.0 0.8796825143761383 -2 0.186614990234375 4 Unmodified _SVPNKDVFQEL_ ENSG00000115919|ENST00000264170|KYNU 33.4449034751529 0.3133739643825231 4 [VS]PYQ{M(Oxidation (M))|F}VDK 9 7 82.955 0.0 0.0 6.5081 0.0 0.0 0.0 208.0726259820922 208.0726259820922 37.95294275538552 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.75 1.1989700043360187 [VS]PYQ{M(Oxidation (M))|F}VDK 6.5081 - 595 + 1 1.261 42467.9 1.0 9958 4889 14845 HBL1_DMSO_200M_050219_2,14849 HBL1_DMSO_200M_050219_2,14849,SVPNKDVFQEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14850 78.195 16.0 2046000.0 25 0 171090.0 30586 RETLQQHKLL 10 64 633.3691586956885 1264.723764458177 2 633.8539916872978 MULTI CID FTMS 0 0 0 14845 1290623.875 0.6414980710928353 2 -0.232147216796875 5 Unmodified _RETLQQHKLL_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000551983.1_1_12:104335630-104337190:+|nuORF 5.731851221503515 0.7001233259664787 4 R[QT]E{I|L}Q[K{I|L}][H{I|L}] 10 5 + 36.923 0.0 0.0 2.9195 2.9195 79.518 0.0 0.0 0.0 29.93378736925017 4.259687322722812 4.259687322722812 36.92348741261036 0 0.0 0.0 0.0 0.4247425010840047 R[QT]E{I|L}Q[K{I|L}][H{I|L}] 2.9195 - 50 + 1 1.261 33424.0 1.0 9959 4889 14845 HBL1_DMSO_200M_050219_2,14850 HBL1_DMSO_200M_050219_2,14850,RETLQQHKLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14851 78.197 31.0 1997100.0 25 0 177060.0 + 44535 YPEAITRLV 9 77 531.3029520904628 1060.5913512477257 2 531.3035766482353 MULTI CID FTMS 0 0 0 14845 1268226.125 0.8750711882001683 -2 0.186614990234375 6 Unmodified _YPEAITRLV_ ENSG00000173039|ENST00000406246|RELA;ENST00000525693.5_1_11:65421851-65422496:-|nuORF;ENST00000531484.5_1_11:65421851-65429483:-|nuORF;nc|ENSG00000173039|Q04206-2|RELA;nc|ENSG00000173039|Q04206-3|RELA;nc|ENSG00000173039|Q04206-4|RELA 43.77239144664712 0.0547478964384323 4 YPEA{I|L} 5 4 75.305 0.0 0.0 7.1003 0.0 0.0 0.0 484.2891992707001 484.2891992707001 41.19402840463316 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.805462187404089 0.0 + YPEA{I|L} 7.1003 + + 101 + 1 1.261 54434.7 1.0 9960 4889 14845 HBL1_DMSO_200M_050219_2,14851 HBL1_DMSO_200M_050219_2,14851,YPEAITRLV True True YPEAITRLV 78.196581 531.303576648235 19442484.0 14845.0 nc|ENSG00000173039|Q04206-4|RELA;;nc|ENSG00000173039|Q04206-2|RELA;;nc|ENSG00000173039|Q04206-3|RELA;;ENST00000525693.5_1_11:65421851-65422496:-|nuORF;;ENSG00000173039|ENST00000406246|RELA;;ENST00000531484.5_1_11:65421851-65429483:-|nuORF 3.653761545817057 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14852 78.198 47.0 1398400.0 25 0 213000.0 + 6104 DSRTFITI 8 90 476.75905372370704 951.503554514214 2 476.7587463259697 MULTI CID FTMS 0 0 0 14845 1157404.125 0.8479919106226745 -1 0.1336288452148437 7 Unmodified _DSRTFITI_ ENSG00000034152|ENST00000342679|MAP2K3;nc|ENSG00000034152|P46734-2|MAP2K3;nc|ENSG00000034152|P46734-3|MAP2K3 41.8396318013385 0.2035142800366642 4 [{I|L}T][YN]D{I|L}T{I|L} 8 5 + 64.614 0.0 0.0 6.7908 6.7908 85.351 0.0 0.0 0.0 15.686362358410122 54.12971259689115 15.686362358410122 6.461280356782382 0 0.9247425010840048 1.6989700043360187 0.7742275032520141 0.0 [{I|L}T][YN]D{I|L}T{I|L};[{I|L}T]MN{M(Oxidation (M))|F}{I|L}T{I|L};[{I|L}T][YN]{I|L}DT{I|L};[{I|L}T][YN]S{I|L}E{I|L};[{I|L}T][YN]{I|L}SE{I|L};[{I|L}T][YN]N[KS]{I|L};{[CA]|SS}{[RE]|[WV]}{M(Oxidation (M))|F}{I|L}T{I|L};[YR][KQ][SG]T{I|L} 6.7908;6.1117;6.0562;5.2652;4.847;3.3555;3.2745;1.6491 -;-;-;-;-;-;-;- 208 1 1.261 57421.8 1.0 9961 4889 14845 HBL1_DMSO_200M_050219_2,14852 HBL1_DMSO_200M_050219_2,14852,DSRTFITI False True DSRTFITI 78.19784 476.75874632597 10800204.0 14845.0 nc|ENSG00000034152|P46734-3|MAP2K3;;ENSG00000034152|ENST00000342679|MAP2K3;;nc|ENSG00000034152|P46734-2|MAP2K3 2.847935120264689 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14853 78.199 45.0 1448600.0 25 0 180820.0 + 3166 AVTEAFVRL 9 88 503.2904785053235 1004.566404077447 2 503.2903015017509 MULTI CID FTMS 0 0 0 14845 1067337.25 0.9692751939867624 -1 0.1336288452148437 8 Unmodified _AVTEAFVRL_ ENSG00000137411|ENST00000676266|VARS2;ENSG00000204394|ENST00000375663|VARS1;ENST00000477288.5_1_6:30884740-30893984:+|nuORF;nc|ENSG00000137411|Q5ST30-3|VARS2;nc|ENSG00000137411|Q5ST30-4|VARS2;nc|ENSG00000204394|P26640-2|VARS1 22.736283301280096 0.2418982879461534 4 {[VA]|[{I|L}G]}TEA{M(Oxidation (M))|F}VR{I|L} 9 0 + 71.08 0.0 0.0 7.0757 7.0757 93.146 0.0 0.0 0.0 57.1277502416482 11.082268588648247 11.082268588648247 18.927900303521312 0 0.4247425010840047 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}TEA{M(Oxidation (M))|F}VR{I|L};{[VA]|[{I|L}G]}TEA{M(Oxidation (M))|F}[R{I|L}]V;{[TV]|[{I|L}S]}[YK]{I|L}E[RP] 7.0757;5.1915;0.36286 +;-;- + 136 + 1 1.261 52488.3 1.0 9962 4889 14845 HBL1_DMSO_200M_050219_2,14853 HBL1_DMSO_200M_050219_2,14853,AVTEAFVRL False True AVTEAFVRL 78.199063 503.290301501751 8257011.0 14845.0 nc|ENSG00000137411|Q5ST30-4|VARS2;;nc|ENSG00000137411|Q5ST30-3|VARS2;;ENSG00000137411|ENST00000676266|VARS2;;nc|ENSG00000204394|P26640-2|VARS1;;ENST00000477288.5_1_6:30884740-30893984:+|nuORF;;ENSG00000204394|ENST00000375663|VARS1 6.18326489130656 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14854 78.2 39.0 1147800.0 25 0 131640.0 6716 EDFIFIEPL 9 74 561.7874514420157 1121.560349950831 2 561.7880737185478 MULTI CID FTMS 0 0 0 14845 907467.375 0.9517600261887628 -1 0.1336288452148437 9 Unmodified _EDFIFIEPL_ ENSG00000145808|ENST00000274487|ADAMTS19;ENST00000505791.5_2_5:128796160-128862161:+|nuORF;nc|ENSG00000145808|Q8TE59|ADAMTS19 12.531546534597751 0.4974689918368763 4 {[QV]|[N{I|L}]|[RA]|[KV]}KDY{I|L}DE{I|L} 9 7 + 57.228 0.0 0.0 5.1026 5.1026 69.304 0.0 0.0 0.0 0.5799194697768684 16.478174818886373 0.5799194697768684 0.5799194697768684 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}KDY{I|L}DE{I|L};[KQ]VDY{I|L}DE{I|L};{NN|[MP]|[D{I|L}]|[EV]}NKY{I|L}DE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DKY{I|L}DE{I|L};{[QN]|[E{I|L}]|[KN]}D[Y{I|L}]{I|L}DE{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGKY{I|L}DE{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{[QN]|[E{I|L}]|[KN]}{I|L}DE{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{[QN]|[E{I|L}]|[KN]}{I|L}DE{I|L};{[YD]|[{M(Oxidation (M))|F}M]}V[KQ]{I|L}DE{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}V[KQ]DE{I|L} 5.1026;5.0508;4.4684;4.4087;3.6878;3.6474;3.308;3.151;3.0396;2.8826 -;-;-;-;-;-;-;-;-;- 220 1 1.261 41599.8 1.0 9963 4889 14845 HBL1_DMSO_200M_050219_2,14854 HBL1_DMSO_200M_050219_2,14854,EDFIFIEPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14855 78.201 45.0 1387400.0 25 0 92549.0 + 14711 IKDILKPEI 9 95 534.8370261135019 1067.6594992938035 2 534.8373901247978 MULTI CID FTMS 0 0 0 14845 902069.3125 0.7914791901166586 2 -0.232147216796875 10 Unmodified _IKDILKPEI_ ENSG00000130713|ENST00000372358|EXOSC2;nc|ENSG00000130713|Q13868-2|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2 36.39500950444726 0.095246261068787 4 {[TV]|[{I|L}S]}[VG]{I|L}{I|L}KPE{I|L} 10 3 + 45.794 0.0 0.0 4.2892 4.2892 76.027 0.0 0.0 0.0 7.068174985992776 14.413318520440797 7.068174985992776 7.068174985992776 0 0.9929928190999392 2.0 0.0 0.0 {[TV]|[{I|L}S]}[VG]{I|L}{I|L}KPE{I|L};[K{I|L}]D{I|L}{I|L}KPE{I|L};[K{I|L}]{I|L}D{I|L}KPE{I|L};{[QN]|[E{I|L}]|[KN]}[{I|L}V]KKPE{I|L} 4.2892;3.6271;3.4157;1.8782 -;+;-;- + 226 1 1.261 56844.1 1.0 9964 4889 14845 HBL1_DMSO_200M_050219_2,14855 HBL1_DMSO_200M_050219_2,14855,IKDILKPEI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14856 78.203 52.0 1268500.0 25 0 141760.0 + 18268 KVIEINPYL 9 98 544.8209068109068 1087.6272606886134 2 544.8218871951103 MULTI CID FTMS 0 0 0 14845 911982.9375 0.1762736857700405 -2 0.186614990234375 11 Unmodified _KVIEINPYL_ ENSG00000100804|ENST00000361611|PSMB5;ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000100804|P28074-2|PSMB5;nc|ENSG00000204264|P28062-2|PSMB8 57.72198328787511 0.0273433238377839 4 {[QN]|[E{I|L}]|[KN]}VK{I|L}NPY{I|L} 9 3 + 76.568 0.0 0.0 7.0399 7.0399 87.748 0.0 0.0 0.0 3.300756084811809 50.83765193977312 3.300756084811809 8.129133566428564 0 1.7059771852360797 0.0 1.0189301784845295 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}VK{I|L}NPY{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}NPY{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}GGPY{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L}NPY{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}GGPY{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L}GGPY{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}[MT]AA{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}[MT]AA{I|L};[VP][RV][WR]Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K[KA][C(Carbamidomethyl (C))K]{I|L} 7.0399;6.2925;6.1933;5.8695;5.4459;5.0229;2.6761;1.9287;1.2217;0.84049 -;-;-;-;-;-;-;-;-;- 247 1 1.261 60922.1 1.0 9965 4889 14845 HBL1_DMSO_200M_050219_2,14856 HBL1_DMSO_200M_050219_2,14856,KVIEINPYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14857 78.204 67.0 1108700.0 25 0 78080.0 + 39921 VFQYRLVEY 9 72 608.8228931438025 1215.631233354405 2 608.8226196169853 MULTI CID FTMS 0 0 0 14845 867053.75 1.0 0 0.0 12 Unmodified _VFQYRLVEY_ ENSG00000163877|ENST00000296215|SNIP1 57.72198328787511 0.0273433238377839 4 V{M(Oxidation (M))|F}QY 4 5 39.24 0.0 0.0 3.228 0.0 0.0 0.0 675.3484255367198 675.3484255367198 -1.4608280609188284 0.0 -1.4608280609188284 0.0 0 0.3807196863200844 0.0 0.0 0.3494850021680094 + V{M(Oxidation (M))|F}QY 3.228 + + 123 + 1 1.261 62715.1 1.0 9966 4889 14845 HBL1_DMSO_200M_050219_2,14857 HBL1_DMSO_200M_050219_2,14857,VFQYRLVEY True True VFQYRLVEY 78.204483 608.822619616985 6438044.5 14845.0 ENSG00000163877|ENST00000296215|SNIP1 5.761748472849528 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14858 78.206 66.0 930590.0 25 0 58927.0 + 30611 RFFDTNTSVL 10 72 600.3063606922871 1198.598168451374 2 600.3068725466728 MULTI CID FTMS 0 0 0 14845 833598.1875 0.5778159121012268 -2 0.186614990234375 13 Unmodified _RFFDTNTSVL_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 51.41523569358685 0.0718446036348414 4 [R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}DTNTSV{I|L} 10 0 + 72.089 0.0 0.0 6.0144 6.0144 84.916 0.0 0.0 0.0 7.269987279362624 51.64320017660792 7.269987279362624 9.164539485499256 0 0.5 0.0 1.8494850021680087 0.0 + + [R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}DTNTSV{I|L};[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}DTGGTSV{I|L};{[QN]|[E{I|L}]|[KN]}[WH]TNTSV{I|L};{[QN]|[E{I|L}]|[KN]}[WH]TNGMV{I|L};{[QN]|[E{I|L}]|[KN]}[WH]TGGTSV{I|L};{[QS]|[NT]}[HA]AATNTSV{I|L};[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}D[C(Carbamidomethyl (C))R]SV{I|L};{[QN]|[E{I|L}]|[KN]}[WH]TGGGMV{I|L};{[QS]|[NT]}[HA]{[QD]|[EN]|[WG]|[KD]|[RS]}NTSV{I|L};{[QN]|[E{I|L}]|[KN]}[WH]T{[QC]|[C(Carbamidomethyl (C))A]}AV{I|L} 6.0144;5.2498;4.7012;4.1798;3.9366;3.5548;3.4475;3.4152;3.0032;2.3653 +;-;-;-;-;-;-;-;-;- + 331 1 1.261 48972.8 1.0 9967 4889 14845 HBL1_DMSO_200M_050219_2,14858 HBL1_DMSO_200M_050219_2,14858,RFFDTNTSVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14859 78.207 47.0 1622600.0 25 0 266550.0 + 38904 TVLEKVYEL 9 103 547.3126328924506 1092.610712851701 2 547.3141967654228 MULTI CID FTMS 0 0 0 14845 634742.0625 0.8098852047529596 -1 0.1336288452148437 14 Unmodified _TVLEKVYEL_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 44.391923383255 0.0526658857881241 4 {[TV]|[{I|L}S]}G{I|L}VYETV{I|L} 10 5 + 72.925 0.0 0.0 6.6743 6.6743 80.199 0.0 0.0 0.0 20.79181246047625 58.25438096213023 20.79181246047625 3.0102999566398125 0 1.0044321917401078 2.0 1.048455006504028 0.0 {[TV]|[{I|L}S]}G{I|L}VYETV{I|L};{[TV]|[{I|L}S]}GV{I|L}YETV{I|L};{[TV]|[{I|L}S]}G{I|L}VYE[KG]K;{[TV]|[{I|L}S]}GV{I|L}YE[KG]K;{[TV]|[{I|L}S]}GVY{I|L}ETV{I|L};{[TV]|[{I|L}S]}G{I|L}VY{[TV]|[{I|L}S]}E{I|L};{[TV]|[{I|L}S]}G{I|L}VY{[TV]|[{I|L}S]}NK;{[TV]|[{I|L}S]}G{I|L}VY[WQ]K;{[TV]|[{I|L}S]}G{I|L}VY[NS]K{I|L};{[TV]|[{I|L}S]}GVY{I|L}E[KG]K 6.6743;6.3988;6.2581;5.9826;5.7346;5.5525;5.3873;5.3404;5.33;5.3184 -;-;-;-;-;-;-;-;-;- 1239 1 1.261 64677.4 1.0 9968 4889 14845 HBL1_DMSO_200M_050219_2,14859 HBL1_DMSO_200M_050219_2,14859,TVLEKVYEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14860 78.209 66.0 826990.0 25 0 146700.0 + + 40619 VIFTKFDEV 9 69 549.2966082110227 1096.5786634888452 2 549.2972900271416 MULTI CID FTMS 0 0 0 14845 573188.5 0.9010895982745014 -1 0.1336288452148437 15 Unmodified _VLCHWLIDV_ nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000074054|Q7Z460-2|CLASP1 19.438996006549623 0.310492472477042 4 [{I|L}V]{M(Oxidation (M))|F}VD{M(Oxidation (M))|F}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 -1 + 73.702 0.0 0.0 6.7211 6.7211 89.752 0.0 0.0 0.0 49.769214307392176 2.243012119929091 2.243012119929091 10.24227503252014 0 0.4247425010840047 2.0 1.4559771852360797 0.0 [{I|L}V]{M(Oxidation (M))|F}VD{M(Oxidation (M))|F}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}V]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}DT{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}V]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}TC(Carbamidomethyl (C)){I|L}V;[{I|L}V]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}TD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}V]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}T[VG]{[ES]|[DT]|[{I|L}C]};[KT]{M(Oxidation (M))|F}{M(Oxidation (M))|F}DEV[{I|L}V];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{M(Oxidation (M))|F}DEV[{I|L}V];[KT]{M(Oxidation (M))|F}{M(Oxidation (M))|F}DVE[{I|L}V];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{M(Oxidation (M))|F}DVE[{I|L}V];[{I|L}V]{M(Oxidation (M))|F}T[{M(Oxidation (M))|F}V]C(Carbamidomethyl (C)){I|L}V 6.7211;5.787;5.1594;5.0553;4.0295;3.9207;3.9207;3.848;3.848;3.7397 -;-;-;-;-;-;-;-;-;- 634 + 1 1.261 50528.9 1.0 9969 4889 14845 HBL1_DMSO_200M_050219_2,14860 HBL1_DMSO_200M_050219_2,14860,VLCHWLIDV False False VIFTKFDEV 78.208969 549.2981 4403476.5 14845.0 nc|ENSG00000074054|Q7Z460-5|CLASP1;;nc|ENSG00000074054|Q7Z460-4|CLASP1;;nc|ENSG00000074054|Q7Z460|CLASP1;;nc|ENSG00000074054|Q7Z460-3|CLASP1;;ENSG00000074054|ENST00000696935|CLASP1;;nc|ENSG00000074054|Q7Z460-2|CLASP1 3.836035092671712 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14861 78.211 97.0 567740.0 25 0 64310.0 + 12227 GQVGHILEL 9 82 483.2743209468617 964.5340889605234 2 483.2746154665947 MULTI CID FTMS 0 0 0 14845 364969.0625 0.5423966769814367 -2 0.186614990234375 16 Unmodified _GQVGHILEL_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 48.345845343767074 0.0439967357579942 4 {[QG]|[NA]}[RH]{I|L}{I|L} 6 4 29.85 0.0 0.0 3.0948 0.0 0.0 0.0 257.11273821272965 257.11273821272965 7.45445281476492 0.0 0.0 0.0 0 0.3054621874040891 0.6020599913279624 0.0 1.110924374808178 {[QG]|[NA]}[RH]{I|L}{I|L} 3.0948 - 184 1 1.261 48491.8 1.0 9970 4889 14845 HBL1_DMSO_200M_050219_2,14861 HBL1_DMSO_200M_050219_2,14861,GQVGHILEL True True GQVGHILEL 78.211067 483.274615466595 12067137.0 14845.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 4.429574251174927 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14862 78.216 243.0 652210.0 25 0 86414.0 + 45740 YYIGDIHPSDL 11 121 646.8117902305028 1291.6090275278054 2 646.8122436404228 MULTI CID FTMS 0 0 0 14845 356927.125 0.9081811835164538 -1 0.1336288452148437 17 Unmodified _YYIGDIHPSDL_ ENSG00000103018|ENST00000307892|CYB5B;ENST00000514123.5_1_16:69458586-69482095:+|nuORF;ENST00000568342.2_1_16:69481073-69493037:+|nuORF 57.72198328787511 0.0783903820882629 4 YY{I|L}GD{I|L}HPDS{I|L} 11 2 + 85.876 0.0 0.0 6.6488 6.6488 76.935 0.0 0.0 0.0 64.89706969156185 9.028875708166211 9.028875708166211 1.326512010338945 0 0.4247425010840047 2.0 1.4698565171985374 0.0 YY{I|L}GD{I|L}HPDS{I|L};YY{I|L}GD{I|L}HPSD{I|L};YY{I|L}GPY{I|L}G{M(Oxidation (M))|F}S{I|L};YY{I|L}GPY{I|L}Q[{M(Oxidation (M))|F}E];YY{I|L}GPY{I|L}GA[{M(Oxidation (M))|F}E];YY{I|L}GD{I|L}[WY]S{I|L};YY{I|L}GPY[{M(Oxidation (M))|F}E]K{I|L};YY{[DA]|[EG]}V{I|L}HPDS{I|L};YY{[DA]|[EG]}V{I|L}HPSD{I|L};YY{I|L}G[{M(Oxidation (M))|F}V][PS]{M(Oxidation (M))|F}S{I|L} 6.6488;6.5461;6.2573;5.8311;5.7991;5.6952;5.3296;4.7319;4.6292;4.1498 -;+;-;-;-;-;-;-;-;- + 1082 + 1 1.261 121499.2 1.0 9971 4889 14845 HBL1_DMSO_200M_050219_2,14862 HBL1_DMSO_200M_050219_2,14862,YYIGDIHPSDL True True YYIGDIHPSDL 78.215623 646.812243640423 12108940.5 14845.0 ENST00000568342.2_1_16:69481073-69493037:+|nuORF;;ENSG00000103018|ENST00000307892|CYB5B;;ENST00000514123.5_1_16:69458586-69482095:+|nuORF 3.072690476973852 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14863 78.219 161.0 674620.0 25 0 77053.0 + 21704 LPLRVPGL 8 99 432.7867275479063 863.5589021626125 2 432.7868224978447 MULTI CID FTMS 0 0 0 14845 358064.875 0.7889812727330693 2 -0.232147216796875 18 Unmodified _LPLRVPGL_ REV__ENSG00000171714|ENST00000324559|ANO5 26.34127834903884 0.4900704351052977 4 {I|L}PP 3 -1 46.682 0.0 0.0 5.4058 0.0 0.0 0.0 553.3481539361936 553.3481539361936 32.70303756120384 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}PP 5.4058 - 64 + 1 1.261 89997.1 1.0 9972 4889 14845 HBL1_DMSO_200M_050219_2,14863 HBL1_DMSO_200M_050219_2,14863,LPLRVPGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14864 78.23 620.0 320410.0 25 0 23514.0 + 26738 NYYPYTITEY 10 186 663.7979074213717 1325.5812619095434 2 663.7985717654228 MULTI CID FTMS 0 0 0 14845 323163.5 0.0760411991253803 3 -0.3141326904296875 19 Unmodified _NYYPYTITEY_ ENSG00000154217|ENST00000581322|PITPNC1;nc|ENSG00000154217|Q9UKF7-2|PITPNC1 71.92227651296345 0.0188747003512554 4 [YN]YPYT 6 4 40.5 0.0 0.0 3.0552 0.0 0.0 0.0 521.2222764250328 521.2222764250328 8.889115128068568 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.6861818737241735 + [YN]YPYT 3.0552 + + 1972 1 1.261 148403.5 1.0 9973 4889 14845 HBL1_DMSO_200M_050219_2,14864 HBL1_DMSO_200M_050219_2,14864,NYYPYTITEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14865 78.233 148.0 320300.0 25 0 26635.0 + 10026 FLASVSTVLTSK 12 64 626.3616014067157 1250.7086498802314 2 626.8627197146416 MULTI CID FTMS 0 0 0 14845 322189.625 0.7260849034845155 4 -0.3678359985351562 20 Unmodified _FPLWIFLTKS_ ENSG00000206172|ENST00000320868|HBA1;ENSG00000188536|ENST00000251595|HBA2 8.155526934196011 0.6889124077178598 4 SV 2 10 10.969 0.0 0.0 0.87703 0.0 0.0 330.188639606868 731.3960657194109 1061.584705326279 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SV 0.87703 - 62 + 1 1.261 42156.1 1.0 9974 4889 14845 HBL1_DMSO_200M_050219_2,14865 HBL1_DMSO_200M_050219_2,14865,FPLWIFLTKS False False FLASVSTVLTSK 78.232619 626.862719714642 9705590.0 14845.0 ENSG00000206172|ENST00000320868|HBA1;;ENSG00000188536|ENST00000251595|HBA2 7.356587251027425 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14867 78.249 800.0 124810.0 25 0 29816.0 -1 0 76 1140.12037456086 3417.3392942827804 3 1140.457080066204 MULTI CID FTMS 0 0 0 14866 195245.328125 0.404176554339597 3 -0.3212890625 1 4 EYTWT 5 -1 27.384 0.0 0.0 0.80131 0.0 0.0 2147.7502207836624 586.2648409479124 2734.015061731575 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6237125054200234 0.0 EYTWT 0.80131 - 296 + 1 1.261 87297.7 0.9200000166893004 9975 4890 14866 HBL1_DMSO_200M_050219_2,14867 HBL1_DMSO_200M_050219_2,14867, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14868 78.261 714.0 193280.0 25 0 36302.0 -1 QMIMMKKKKK 10 167 655.3823079751647 1308.7500630171294 2 655.3826782107353 MULTI CID FTMS 0 0 0 14866 264718.625 0.3523390482357417 11 -1.2333450317382812 2 Oxidation (M) _QMIM(Oxidation (M))MKKKKK_ ENSG00000099715|ENST00000698851|PCDH11Y;ENSG00000102290|ENST00000682573|PCDH11X;ENST00000361724.3_1_X:91090458-91134302:+|nuORF;nc|ENSG00000099715|Q9BZA8-2|PCDH11Y;nc|ENSG00000099715|Q9BZA8-3|PCDH11Y;nc|ENSG00000099715|Q9BZA8-4|PCDH11Y;nc|ENSG00000099715|Q9BZA8|PCDH11Y;nc|ENSG00000102290|Q9BZA7-2|PCDH11X;nc|ENSG00000102290|Q9BZA7-3|PCDH11X;nc|ENSG00000102290|Q9BZA7-4|PCDH11X;nc|ENSG00000102290|Q9BZA7-5|PCDH11X;nc|ENSG00000102290|Q9BZA7-6|PCDH11X;nc|ENSG00000102290|Q9BZA7-7|PCDH11X;nc|ENSG00000102290|Q9BZA7-8|PCDH11X 1.4819007175156935 0.719781833666733 4 {I|L}Y{I|L}D 4 -1 23.8 0.0 0.0 1.8185 0.0 0.0 126.15272522591688 675.3175142877561 801.470239513673 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}Y{I|L}D 1.8185 - 523 + 1 1.261 121169.2 1.0 9976 4890 14866 HBL1_DMSO_200M_050219_2,14868 HBL1_DMSO_200M_050219_2,14868,QMIMMKKKKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14869 78.275 767.0 443490.0 25 0 48617.0 + 42852 VVLGEFGVRNV 11 176 594.8403550962885 1187.6661572593769 2 594.8412963747978 MULTI CID FTMS 0 0 0 14866 231907.40625 0.0594321479979802 -2 0.18017578125 3 Unmodified _VVLGEFGVRNV_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 125.0377797344192 0.0507112935595279 4 VV{I|L}GE{M(Oxidation (M))|F}GVRNV 11 0 + 130.67 0.0 0.0 11.002 11.002 90.689 0.0 0.0 0.0 97.85204207588772 7.943138310801373 7.943138310801373 6.377268672201453 0 1.860924374808178 2.0 0.9163865622122672 1.8594862925859053 + + VV{I|L}GE{M(Oxidation (M))|F}GVRNV;VVVAE{M(Oxidation (M))|F}GVRNV;VV{I|L}G{M(Oxidation (M))|F}EGVRNV;VV{I|L}GE{M(Oxidation (M))|F}GVRGGV;VV{I|L}GE{M(Oxidation (M))|F}VGRNV;VVVA{M(Oxidation (M))|F}EGVRNV;VVVAE{M(Oxidation (M))|F}GVRGGV;VVVAE{M(Oxidation (M))|F}VGRNV;VV{I|L}GEV{M(Oxidation (M))|F}GRNV;VV{I|L}G{M(Oxidation (M))|F}EGVRGGV 11.002;10.465;10.174;10.081;10.073;9.6375;9.5445;9.5359;9.3973;9.254 +;-;-;-;-;-;-;-;-;- + 24734 + 1 1.261 252452.9 1.0 9977 4890 14866 HBL1_DMSO_200M_050219_2,14869 HBL1_DMSO_200M_050219_2,14869,VVLGEFGVRNV True True VVLGEFGVRNV 78.274525 594.841296374798 60322284.0 14866.0 nc|ENSG00000171453|O15160-2|POLR1C;;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;;ENSG00000171453|ENST00000642195|POLR1C 8.33534320195516 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14870 78.288 800.0 472130.0 25 0 30908.0 + 19246 LEKCRPLIGF 10 229 588.3354738480257 1174.6563947628513 2 588.3362914919853 MULTI CID FTMS 0 0 0 14866 197864.140625 0.5326056317472585 -3 0.2331619262695312 4 Unmodified _LEKCRPLIGF_ REV__ENST00000440639.2_1_4:84376438-84376846:-|nuORF;REV__nc|ENSG00000163312|Q8TDG4-5|HELQ 8.745405648335112 0.6861838735306406 4 [YR]{I|L}PQCSY 8 -1 31.892 0.0 0.0 2.715 0.0 0.0 0.0 161.16926113223136 161.16926113223136 12.907300390241684 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3054621874040891 [YR]{I|L}PQCSY 2.715 - 2908 1 1.261 276140.0 0.959999978542328 9978 4890 14866 HBL1_DMSO_200M_050219_2,14870 HBL1_DMSO_200M_050219_2,14870,LEKCRPLIGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14871 78.302 800.0 131380.0 25 0 9354.4 16246 IVQQLHRNSI 10 150 604.3486961834969 1206.6828394337938 2 604.3510619997978 MULTI CID FTMS 0 0 0 14866 182658.34375 0.3952361371922273 -2 0.18017578125 5 Unmodified _IVQQLHRNSI_ ENSG00000177189|ENST00000379565|RPS6KA3 7.289230182591677 0.6929195370588109 4 [{I|L}P]{I|L}PE 5 8 22.932 0.0 0.0 1.9004 0.0 0.0 0.0 654.3592623346311 654.3592623346311 8.293037728310246 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 [{I|L}P]{I|L}PE 1.9004 - 476 + 1 1.261 77235.6 0.9700000286102296 9979 4890 14866 HBL1_DMSO_200M_050219_2,14871 HBL1_DMSO_200M_050219_2,14871,IVQQLHRNSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14872 78.311 474.0 423740.0 25 0 26505.0 + 8761 EVPERFLEV 9 170 559.2976682806922 1116.5807836281842 2 559.2982055544853 MULTI CID FTMS 0 0 0 14866 178368.28125 0.6573985868622905 -2 0.18017578125 6 Unmodified _EVRSSSEKPV_ ENSG00000117707|ENST00000366958|PROX1 32.89776655970281 0.2325650513667944 4 [{I|L}T]{I|L}[WE]EVEV 9 8 + 59.74 0.0 0.0 5.3502 5.3502 72.931 0.0 0.0 0.0 2.725541363217559 14.973024840566469 2.725541363217559 1.9188552623891293 0 0.6462566630072955 1.2218487496163564 1.4225924581435252 0.0 [{I|L}T]{I|L}[WE]EVEV;[{I|L}T]{I|L}{[MS]|[{M(Oxidation (M))|F}A]}PEVEV;{[QN]|[E{I|L}]|[KN]}MR{I|L}EVEV;[{I|L}T][WE]{I|L}EVEV;{I|L}{I|L}T[WE]EVEV;{I|L}{I|L}T{[MS]|[{M(Oxidation (M))|F}A]}PEVEV;[EP]R{M(Oxidation (M))|F}{I|L}EVEV;[VP]W{M(Oxidation (M))|F}{I|L}EVEV;[{I|L}T]{I|L}{[WT]|[RM]}QQEV;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))R]{[NV]|[RG]}VEV 5.3502;5.1784;5.1061;5.0372;4.7506;4.5788;4.481;4.2936;3.6709;3.4918 -;-;-;-;-;-;-;-;-;- 1759 1 1.261 157584.1 1.0 9980 4890 14866 HBL1_DMSO_200M_050219_2,14872 HBL1_DMSO_200M_050219_2,14872,EVRSSSEKPV False False EVPERFLEV 78.310587 559.298205554485 8760307.0 14866.0 ENSG00000117707|ENST00000366958|PROX1 4.800815582275391 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14873 78.326 800.0 186880.0 25 0 8680.6 38407 TRDGWAPDGAL 11 184 579.7798408581325 1157.545128783065 2 580.2834960818291 MULTI CID FTMS 0 0 0 14866 182817.328125 0.6839002443855903 2 -0.2675857543945312 7 Unmodified _TRDGWAPDGAL_ ENST00000463704.5_1_2:74710222-74710678:+|nuORF 13.042465956692816 0.7638483625850725 4 [EP]SV 4 10 26.788 0.0 0.0 2.3142 0.0 0.0 0.0 742.3264147540211 742.3264147540211 8.782103366686638 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.2887254899964357 0.0 [EP]SV 2.3142 - 1414 1 1.261 114277.5 0.800000011920929 9981 4890 14866 HBL1_DMSO_200M_050219_2,14873 HBL1_DMSO_200M_050219_2,14873,TRDGWAPDGAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14874 78.34 800.0 172790.0 25 0 42799.0 19041 LDLRRPMRTVP 11 146 677.3950612702711 1352.775569607342 2 677.3970825076103 MULTI CID FTMS 0 0 0 14866 160192.8125 0.3206740713271588 -3 0.2331619262695312 8 Unmodified _LDLRRPMRTVP_ ENSG00000143006|ENST00000371445|DMRTB1 2.9952420565917617 0.861016188266951 4 V 1 10 9.0344 0.0 0.0 0.66784 0.0 0.0 1235.696160893278 0.0 1235.696160893278 0.0 0.539526986547596 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.66784 + + 157 + 1 1.261 114852.8 0.7699999809265137 9982 4890 14866 HBL1_DMSO_200M_050219_2,14874 HBL1_DMSO_200M_050219_2,14874,LDLRRPMRTVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14875 78.354 800.0 88119.0 25 0 16029.0 -1 0 52 1116.7896146040457 0 1116.788623034954 PEAK CID FTMS 0 0 0 14866 116986.046875 1.0 0 0.0 9 4 E 1 -1 6.9897 0.0 0.0 0.31322 0.0 0.0 1575.3358994490316 524.1637667291624 2099.499666178194 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.31322 - 17 + 1 1.261 62280.2 0.5899999737739563 9983 4890 14866 HBL1_DMSO_200M_050219_2,14875 HBL1_DMSO_200M_050219_2,14875, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14876 78.369 800.0 108250.0 25 0 12262.0 + 23416 LTELIKHQLLY 11 161 685.9085801866416 1369.8026074400832 2 686.4125854372978 MULTI CID FTMS 0 0 0 14866 112146.7109375 0.7124681816390525 -4 0.39923095703125 10 Unmodified _LTELIKHQLLY_ REV__ENSG00000158863|ENST00000289921|FHIP2B;REV__ENST00000488968.1_1_8:21953801-21954290:+|nuORF;REV__ENST00000498344.2_1_8:21946698-21954290:+|nuORF 8.745405648335112 0.8338865417133445 4 [{I|L}T]E{I|L} 4 -1 22.58 0.0 0.0 1.6484 0.0 0.0 0.0 910.5206304715864 910.5206304715864 11.470544657224837 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.1989700043360188 0.0 [{I|L}T]E{I|L} 1.6484 + + 327 1 1.261 69214.4 0.6499999761581421 9984 4890 14866 HBL1_DMSO_200M_050219_2,14876 HBL1_DMSO_200M_050219_2,14876,LTELIKHQLLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14877 78.375 383.0 295510.0 25 0 32400.0 + 8723 EVLLRSKIP 9 113 352.2252644955388 1053.6539640868164 3 352.2250244021416 MULTI CID FTMS 0 0 0 14866 103761.671875 0.5607147329208322 1 -0.1856002807617187 11 Unmodified _EVLLRSKIP_ REV__Tigger2b_Pri_dup1770|chr15:88634948-88635968:-|1.005140273448427|0.0574243708712047|4.13|47.0|39|3|sense 17.44264345198275 0.3645313841742926 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L} 4 -1 37.065 0.0 0.0 3.5177 0.0 0.0 0.0 596.3493746393186 596.3493746393186 23.0854562117252 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L} 3.5177 + + 78 + 1 1.261 91979.3 1.0 9985 4890 14866 HBL1_DMSO_200M_050219_2,14877 HBL1_DMSO_200M_050219_2,14877,EVLLRSKIP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14878 78.389 800.0 121390.0 25 0 21931.0 -1 0 103 1047.979296863079 0 1047.979296863079 PEAK CID FTMS 0 0 0 -1 0 12 4 KK{I|L}DV{I|L}T 7 -1 33.047 0.0 0.0 1.579 0.0 0.0 1035.35313212715 257.0945223443969 1292.447654471547 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4604093769761874 0.3494850021680094 KK{I|L}DV{I|L}T 1.579 - 2182 + 1 1.261 67552.4 0.6899999976158142 9986 4890 14866 HBL1_DMSO_200M_050219_2,14878 HBL1_DMSO_200M_050219_2,14878, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14879 78.404 800.0 191740.0 25 0 7598.2 -1 0 134 764.6894239701113 2291.046442510534 3 764.6894409060478 MULTI CID FTMS 0 0 0 14866 97972.6796875 0.8358771128629462 -1 0.0465469360351562 13 4 [MD]PN{I|L}NAD{[{M(Oxidation (M))|F}H]|[RQ]}DV{[MS]|[{M(Oxidation (M))|F}A]}QS{I|L}KDD 20 -1 + 108.62 0.0 0.0 4.7409 4.7409 72.401 0.0 0.0 0.0 49.961214824547255 2.385606273598313 2.385606273598313 3.0102999566398125 0 0.3807196863200844 2.0 0.805462187404089 0.8494850021680094 [MD]PN{I|L}NAD{[{M(Oxidation (M))|F}H]|[RQ]}DV{[MS]|[{M(Oxidation (M))|F}A]}QS{I|L}KDD;[MD]PN{I|L}NAD{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}G[YV]QS{I|L}KDD;[MD]PN{I|L}NAD{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}T{[MS]|[{M(Oxidation (M))|F}A]}QS{I|L}KDD;[MD]PN{I|L}NW{[{M(Oxidation (M))|F}H]|[RQ]}DV{[MS]|[{M(Oxidation (M))|F}A]}QS{I|L}KDD;[MD]PN{I|L}NW{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}G[YV]QS{I|L}KDD;[MD]PN{I|L}NW{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}T{[MS]|[{M(Oxidation (M))|F}A]}QS{I|L}KDD;[NP]{I|L}NW{NN|[MP]|[D{I|L}]|[EV]}NG{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}DAN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NW{[VA]|[{I|L}G]}QVD{[{M(Oxidation (M))|F}H]|[RQ]}DAN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NW{NN|[MP]|[D{I|L}]|[EV]}GGG{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}DAN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NAD{NN|[MP]|[D{I|L}]|[EV]}NG{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}DAN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]} 4.7409;4.6095;4.6095;4.4455;4.3141;4.3141;4.3139;4.2716;4.2701;4.1932 -;-;-;-;-;-;-;-;-;- 10966 + 1 1.261 113296.7 0.7799999713897705 9987 4890 14866 HBL1_DMSO_200M_050219_2,14879 HBL1_DMSO_200M_050219_2,14879, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14880 78.418 800.0 198460.0 25 0 38587.0 + -1 GFPSSVAAL 9 81 848.4509322018574 847.4436557352574 1 848.4524413943291 MULTI CID FTMS 0 0 0 14866 94006.7265625 0.2886228513264043 -11 1.0867996215820312 14 Oxidation (M) _LM(Oxidation (M))QGALSL_ ENST00000568997.5_1_16:30205929-30206181:+|nuORF;nc|ENSG00000181625|Q9BQ83-2|SLX1A;ENST00000561824.5_1_16:30205929-30212162:+|nuORF;chr16:30194791-30197044|10|10.3|0.0|19.97|+|0|SLX1A-SULT1A3,None|1;ENSG00000181625|ENST00000330181|SLX1B;ENST00000565219.1_1_16:29466524-29469442:+|nuORF;ENSG00000132207|ENST00000251303|SLX1A 44.40701690623563 0.1655546087385432 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NAA{I|L}S{I|L} 8 -1 + 45.154 0.0 0.0 5.3283 5.3283 73.638 0.0 0.0 0.0 3.99076439609005 25.73773711106654 3.99076439609005 2.396518287104435 0 0.0 0.0 0.6643943297944485 0.9916440611282626 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NAA{I|L}S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ANA{I|L}S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NTVAA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QGA{I|L}S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QSVAA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AGSVAA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGTVAA{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QQ{I|L}S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NA{[TV]|[{I|L}S]}A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AGQ{I|L}S{I|L} 5.3283;5.0455;4.8776;4.8046;4.3539;4.2935;3.7846;3.6878;3.6366;3.6194 -;-;-;+;-;-;-;-;-;- + 516 1 1.261 115003.9 0.8399999737739563 9988 4890 14866 HBL1_DMSO_200M_050219_2,14880 HBL1_DMSO_200M_050219_2,14880,LMQGALSL False False GFPSSVAAL 78.418174 848.452441394329 4476962.5 14866.0 ENST00000568997.5_1_16:30205929-30206181:+|nuORF;;nc|ENSG00000181625|Q9BQ83-2|SLX1A;;ENST00000561824.5_1_16:30205929-30212162:+|nuORF;;chr16:30194791-30197044|10|10.3|0.0|19.97|+|0|SLX1A-SULT1A3,None|1;;ENSG00000181625|ENST00000330181|SLX1B;;ENST00000565219.1_1_16:29466524-29469442:+|nuORF;;ENSG00000132207|ENST00000251303|SLX1A 2.6333941221237183 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14882 78.423 8.5 8054900.0 25 0 644520.0 + 13627 HPPSHWPLI 9 88 542.2906042372043 1082.5666555412083 2 542.2910034060478 MULTI CID FTMS 0 0 0 14881 5654178.5 0.9607715462232668 -2 0.232147216796875 1 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 85.35673624503755 0.0162188719545379 4 [{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L} 9 5 + 62.514 0.0 0.0 5.7746 5.7746 71.41 0.0 0.0 0.0 0.2545373444029053 14.769987279362624 0.2545373444029053 0.2545373444029053 0 1.142159058960253 1.6989700043360187 0.0 0.0 [{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]HWP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]WHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L};[{I|L}P]C{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]WPH{I|L}{I|L};[WH][PS]PHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PP{I|L}H{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PPH{I|L}{I|L} 5.7746;5.7511;5.6726;5.2319;5.0347;4.8956;4.6098;4.4065;4.2423;4.1691 -;+;-;-;-;-;-;-;-;- + 358 1 1.271 59341.1 1.0 9989 4891 14881 HBL1_DMSO_200M_050219_2,14882 HBL1_DMSO_200M_050219_2,14882,HPPSHWPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14883 78.424 48.0 1107000.0 25 0 195690.0 + 2989 AVIGDVIRV 9 83 471.2925794486314 940.5706059640628 2 471.2928649783134 MULTI CID FTMS 0 0 0 14881 568843.125 0.0577389412122472 3 -0.281646728515625 2 Unmodified _AVIGDVIRV_ ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21 17.11289562659939 0.3734572693229295 4 {[VA]|[{I|L}G]}{I|L}GDV 6 3 46.643 0.0 0.0 4.959 0.0 0.0 0.0 383.24021326236567 383.24021326236567 35.04940636348586 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[VA]|[{I|L}G]}{I|L}GDV 4.959 + + 183 + 1 1.271 46073.4 1.0 9990 4891 14881 HBL1_DMSO_200M_050219_2,14883 HBL1_DMSO_200M_050219_2,14883,AVIGDVIRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14884 78.425 6.5 7502800.0 25 0 1109400.0 + 31516 RQIDDILSV 9 59 529.7957777133807 1057.5770024935614 2 529.7966796755791 MULTI CID FTMS 0 0 0 14881 5543726.0 1.0 0 0.0 3 Unmodified _RQIDDILSV_ ENSG00000117448|ENST00000351829|AKR1A1;ENST00000497973.5_1_1:46032543-46034819:+|nuORF 31.26834338654808 0.1333407332142048 4 DD{I|L}{I|L}W 5 5 44.196 0.0 0.0 4.179 0.0 0.0 397.2448597638688 0.0 397.2448597638688 0.0 19.75895023531386 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 DD{I|L}{I|L}W 4.179 - 87 1 1.271 44930.4 1.0 9991 4891 14881 HBL1_DMSO_200M_050219_2,14884 HBL1_DMSO_200M_050219_2,14884,RQIDDILSV False True RQIDDILSV 78.425313 529.796679675579 92334568.0 14881.0 ENSG00000117448|ENST00000351829|AKR1A1;;ENST00000497973.5_1_1:46032543-46034819:+|nuORF 5.4768398602803545 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14885 78.426 25.0 2961100.0 25 0 287270.0 + 41866 VPYPLPKI 8 67 463.78933281423656 925.5641126952733 2 463.7893554568291 MULTI CID FTMS 0 0 0 14881 2308092.5 1.0 0 0.0 4 Unmodified _VPYPLPKI_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1 53.57557251787612 0.1224291679108181 4 VPYP{I|L}PK{I|L} 8 0 + 71.425 0.0 0.0 7.7169 7.7169 79.908 0.0 0.0 0.0 22.250547101681875 9.69273760456403 9.69273760456403 1.249387366082999 0 1.1861818737241734 1.6989700043360187 0.0 0.0 + + VPYP{I|L}PK{I|L};VPY{I|L}PPK{I|L};V{I|L}{M(Oxidation (M))|F}P{I|L}PK{I|L};V{I|L}{M(Oxidation (M))|F}{I|L}PPK{I|L};VP[{I|L}T]QQK{I|L};V{I|L}[TA]{[QG]|[NA]}PK{I|L};V{I|L}[TP]QQK{I|L} 7.7169;7.5819;5.7952;5.6602;3.2057;2.5475;1.284 +;-;-;-;-;-;- + 212 + 1 1.271 60692.7 1.0 9992 4891 14881 HBL1_DMSO_200M_050219_2,14885 HBL1_DMSO_200M_050219_2,14885,VPYPLPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14886 78.428 21.0 2739300.0 25 0 269770.0 15530 IPVLANFIV 9 75 493.30756668585485 984.6005804385096 2 493.3083984255791 MULTI CID FTMS 0 0 0 14881 1976745.75 0.3307522997519959 27 -2.791488647460937 5 Unmodified _IPVLANFIV_ ENSG00000146085|ENST00000274813|MMUT 21.74664581756881 0.2544899275067181 4 {I|L}P 2 7 45.217 0.0 0.0 4.5924 0.0 0.0 0.0 771.4409024201158 771.4409024201158 19.838650445780456 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.5924 + + 130 + 1 1.271 49802.8 1.0 9993 4891 14881 HBL1_DMSO_200M_050219_2,14886 HBL1_DMSO_200M_050219_2,14886,IPVLANFIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14887 78.429 27.0 2034700.0 25 0 361220.0 + 2993 AVIHEAPAVLL 11 65 566.8399617877486 1131.6653706422971 2 566.8402587771416 MULTI CID FTMS 0 0 0 14881 1645964.125 0.9106641035468678 -1 0.1856002807617187 6 Unmodified _AVIHEAPAVLL_ ENSG00000146232|ENST00000619360|NFKBIE;nc|ENSG00000146232|O00221|NFKBIE 16.274544907608252 0.6966175468278786 4 EAPAV{I|L}{I|L} 7 4 58.219 0.0 0.0 5.1446 0.0 0.0 420.2504139630875 0.0 420.2504139630875 0.0 38.67647754744384 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + EAPAV{I|L}{I|L} 5.1446 + + 87 1 1.271 50338.1 1.0 9994 4891 14881 HBL1_DMSO_200M_050219_2,14887 HBL1_DMSO_200M_050219_2,14887,AVIHEAPAVLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14888 78.43 38.0 1711800.0 25 0 232350.0 + 2306 AQIEDLQVKL 10 85 578.8319407105776 1155.649328487955 2 578.8325073122978 MULTI CID FTMS 0 0 0 14881 1392170.0 0.8366645710037224 -1 0.1856002807617187 7 Unmodified _AQIEDLQVKL_ ENSG00000157933|ENST00000378536|SKI 33.4449034751529 0.2267874087365337 4 [QA]{I|L}ED{I|L}QVK{I|L} 10 0 + 62.604 0.0 0.0 5.4172 5.4172 82.491 0.0 0.0 0.0 3.865006360318688 10.026975159433531 3.865006360318688 9.164539485499256 0 0.8494850021680094 0.9208187539523752 0.4247425010840047 0.2059771852360797 + + [QA]{I|L}ED{I|L}QVK{I|L};[QA]{I|L}ED{I|L}[AG]VK{I|L};{[QN]|[E{I|L}]|[KN]}DQV{I|L}KRR;{[QN]|[E{I|L}]|[KN]}DQ{I|L}VKRR;{[QN]|[E{I|L}]|[KN]}NEV{I|L}KRR;{[QN]|[E{I|L}]|[KN]}NE{I|L}VKRR;{[QN]|[E{I|L}]|[KN]}D[AG]V{I|L}KRR;{[QN]|[E{I|L}]|[KN]}D[AG]{I|L}VKRR;{[QN]|[E{I|L}]|[KN]}GGEV{I|L}KRR;{NN|[MP]|[D{I|L}]|[EV]}EQV{I|L}KRR 5.4172;4.6242;3.8913;3.7413;3.6309;3.4808;3.0945;2.9445;2.8341;2.8246 +;-;-;-;-;-;-;-;-;- + 492 + 1 1.271 54563.8 1.0 9995 4891 14881 HBL1_DMSO_200M_050219_2,14888 HBL1_DMSO_200M_050219_2,14888,AQIEDLQVKL False True AQIEDLQVKL 78.430028 578.832507312298 23623998.0 14881.0 ENSG00000157933|ENST00000378536|SKI 6.589327017466228 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14889 78.431 36.0 1449800.0 25 0 173680.0 + 32329 RYLPQCSYF 9 72 588.7790415134806 1175.543530093761 2 588.7795898318291 MULTI CID FTMS 0 0 0 14881 1242051.5 0.8956058545822094 -1 0.1856002807617187 8 Unmodified _RYLPQCSYF_ ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2 29.081581746732265 0.1611639662936252 4 [YR]{I|L}[QP]CSY{M(Oxidation (M))|F} 9 0 + 43.35 0.0 0.0 3.6877 3.6877 81.684 0.0 0.0 0.0 4.762036441594191 28.746068678535792 4.762036441594191 43.35016244829767 0 0.5 0.0 0.4247425010840047 0.0 + + [YR]{I|L}[QP]CSY{M(Oxidation (M))|F} 3.6877 + + 47 1 1.271 43331.5 1.0 9996 4891 14881 HBL1_DMSO_200M_050219_2,14889 HBL1_DMSO_200M_050219_2,14889,RYLPQCSYF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14890 78.432 38.0 1311600.0 25 0 120860.0 + 41497 VPMPYTLKV 9 75 524.3002278712416 1046.5859028092832 2 524.3001586794853 MULTI CID FTMS 0 0 0 14881 929720.6875 1.0 0 0.0 9 Unmodified _VPMPYTLKV_ ENSG00000116701|ENST00000367535|NCF2;nc|ENSG00000116701|P19878-2|NCF2;nc|ENSG00000116701|P19878-3|NCF2;nc|ENSG00000116701|P19878-4|NCF2 22.736283301280096 0.2418982879461534 4 [VP][{M(Oxidation (M))|F}T]K{I|L}T 7 5 36.616 0.0 0.0 3.4986 0.0 0.0 0.0 257.09357629947505 257.09357629947505 20.28028723600244 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.805462187404089 0.0 [VP][{M(Oxidation (M))|F}T]K{I|L}T 3.4986 - 173 + 1 1.271 50530.9 1.0 9997 4891 14881 HBL1_DMSO_200M_050219_2,14890 HBL1_DMSO_200M_050219_2,14890,VPMPYTLKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14891 78.434 51.0 1199200.0 25 0 147460.0 + 24747 MPFFAKTV 8 86 470.7519958412094 939.4894387492188 2 470.7519409060478 MULTI CID FTMS 0 0 0 14881 674598.875 1.0 0 0.0 10 Unmodified _MPFFAKTV_ ENSG00000137815|ENST00000389629|RTF1 34.40172386719151 0.3279500639400574 4 MP{M(Oxidation (M))|F}{M(Oxidation (M))|F}AKTV 8 0 + 54.65 0.0 0.0 5.817 5.817 90.051 0.0 0.0 0.0 18.32866249833645 9.334881589393348 9.334881589393348 46.92593794827835 0 0.6237125054200234 1.2218487496163564 0.2887254899964357 0.0 + + MP{M(Oxidation (M))|F}{M(Oxidation (M))|F}AKTV;M[HD][{I|L}P]KTV;[QA][WH]AKTV;M[HA]DV[R{I|L}]V;M[HD]AV[R{I|L}]V 5.817;0.82218;0.50176;0.4923;0.35932 +;-;-;-;- + 241 + 1 1.271 54766.0 1.0 9998 4891 14881 HBL1_DMSO_200M_050219_2,14891 HBL1_DMSO_200M_050219_2,14891,MPFFAKTV False True MPFFAKTV 78.433713 470.751940906048 5731654.5 14881.0 ENSG00000137815|ENST00000389629|RTF1 4.904590447743733 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14892 78.436 117.0 535170.0 25 0 52996.0 + 31891 RTMENLVEL 9 74 552.7894294725178 1103.5643060118357 2 552.7900268435478 MULTI CID FTMS 0 0 0 14881 445052.78125 0.2323260485569108 2 -0.1356887817382812 11 Unmodified _RTMENLVEL_ ENSG00000078246|ENST00000448120|TULP3;nc|ENSG00000078246|O75386-2|TULP3 22.65808497894818 0.2428932432760099 4 TV{I|L}NEQE{I|L} 8 5 51.835 0.0 0.0 4.6971 0.0 0.0 159.09025923624796 0.0 159.09025923624796 0.0 41.37762578815625 0.0 0.0 0 0.5 0.0 0.5 0.0 TV{I|L}NEQE{I|L} 4.6971 - 228 + 1 1.271 55432.8 1.0 9999 4891 14881 HBL1_DMSO_200M_050219_2,14892 HBL1_DMSO_200M_050219_2,14892,RTMENLVEL False True RTMENLVEL 78.436167 552.790026843548 13110063.0 14881.0 nc|ENSG00000078246|O75386-2|TULP3;;ENSG00000078246|ENST00000448120|TULP3 4.581000884373983 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14893 78.44 192.0 391640.0 25 0 36969.0 + + 35896 SVIPDDSSKPLYL 13 75 717.3795098439758 1432.7444667547516 2 717.3806640505791 MULTI CID FTMS 0 0 0 14881 389725.84375 0.6586044409547652 1 -0.0819854736328125 12 Unmodified _SVLWPYLWEQL_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 15.248480904072842 0.7179608125786238 4 [VS]{I|L}PDD{[CA]|SS}K[{I|L}P]Y{I|L} 13 -1 + 66.97 0.0 0.0 4.6742 4.6742 73.4 0.0 0.0 0.0 15.365716455251544 12.584203951415104 12.584203951415104 3.631779024128264 0 0.9247425010840048 1.6989700043360187 0.4247425010840047 0.0 [VS]{I|L}PDD{[CA]|SS}K[{I|L}P]Y{I|L};[VS]{I|L}PD{[C(Carbamidomethyl (C))E]|[WC]}K[{I|L}P]Y{I|L} 4.6742;4.4207 -;- 149 + 1 1.271 62412.8 1.0 10000 4891 14881 HBL1_DMSO_200M_050219_2,14893 HBL1_DMSO_200M_050219_2,14893,SVLWPYLWEQL False False SVIPDDSSKPLYL 78.439888 717.380664050579 13177257.0 14881.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 7.420828342437744 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14894 78.444 212.0 298540.0 25 0 45707.0 19264 LEKKAKRQGPQ 11 93 641.8822995054525 1281.7500460777048 2 641.8821899294853 MULTI CID FTMS 0 0 0 14881 338990.90625 0.4651637945347963 4 -0.3584747314453125 13 Unmodified _LEKKAKRQGPQ_ ENSG00000203780|ENST00000368693|FANK1;ENST00000494896.1_1_10:127668734-127668908:+|nuORF;nc|ENSG00000203780|Q8TC84-2|FANK1;nc|ENSG00000203780|Q8TC84-3|FANK1 4.897010918128616 0.8520435188433833 4 {I|L} 1 10 11.42 0.0 0.0 0.89097 0.0 0.0 1150.6549360696954 0.0 1150.6549360696954 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.89097 + + 69 + 1 1.271 56764.0 1.0 10001 4891 14881 HBL1_DMSO_200M_050219_2,14894 HBL1_DMSO_200M_050219_2,14894,LEKKAKRQGPQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14895 78.446 101.0 741920.0 25 0 109850.0 + + 11505 AQIAEGMAYI 10 96 533.8348105728094 1065.6550682124189 2 533.8348266482353 MULTI CID FTMS 0 0 0 14881 330538.84375 0.3552752374313985 -6 0.6419830322265625 14 Unmodified _GILPWGILVV_ nc|ENSG00000254087|P07948-2|LYN;ENSG00000136573|ENST00000259089|BLK;ENSG00000254087|ENST00000519728|LYN 18.13498045792455 0.5432546531930572 4 Q{I|L}{I|L}VV 5 -1 39.464 0.0 0.0 3.7033 0.0 0.0 495.2813587873063 0.0 495.2813587873063 0.0 23.26606256887672 0.0 0.0 0 0.5 0.0 0.0 0.0 Q{I|L}{I|L}VV 3.7033 - 189 1 1.271 68782.4 1.0 10002 4891 14881 HBL1_DMSO_200M_050219_2,14895 HBL1_DMSO_200M_050219_2,14895,GILPWGILVV False False AQIAEGMAYI 78.446092 533.834826648235 4054754.0 14881.0 nc|ENSG00000254087|P07948-2|LYN;;ENSG00000136573|ENST00000259089|BLK;;ENSG00000254087|ENST00000519728|LYN -0.0796592632929484 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14896 78.448 84.0 558910.0 25 0 64239.0 + -1 LGASSDLCSL 10 77 511.7434588186719 1021.4723647041438 2 511.7440063357353 MULTI CID FTMS 0 0 0 14881 277646.4375 0.4735009687260876 -2 0.232147216796875 15 Carbamidomethyl (C) _LGASSDLC(Carbamidomethyl (C))SL_ REV__ENST00000452089.5_3_7:99950889-99956429:+|nuORF;REV__ENST00000609309.2_3_7:99955758-99956429:+|nuORF 16.942295170755138 0.5632667538960775 4 {[VA]|[{I|L}G]}A 3 -1 17.447 0.0 0.0 1.7081 0.0 0.0 0.0 777.3060951331079 777.3060951331079 -0.1156189942356853 0.0 -0.1156189942356853 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}A 1.7081 + + 122 1 1.271 42648.5 1.0 10003 4891 14881 HBL1_DMSO_200M_050219_2,14896 HBL1_DMSO_200M_050219_2,14896,LGASSDLCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14897 78.462 800.0 203570.0 25 0 17370.0 -1 0 123 1010.9705049120232 2019.926456890846 2 1011.473681628704 MULTI CID FTMS 0 0 0 14881 248815.875 0.6753257371951512 1 -0.0819854736328125 16 4 [NP]GVTD{M(Oxidation (M))|F}D{M(Oxidation (M))|F}[KA]EN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 18 -1 + 61.63 0.0 0.0 3.0511 3.0511 71.934 0.0 0.0 0.0 11.233324220155597 34.64329440537556 11.233324220155597 6.613582899991414 0 0.3494850021680094 0.0 0.809894379144197 0.9258337024346172 [NP]GVTD{M(Oxidation (M))|F}D{M(Oxidation (M))|F}[KA]EN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]KED{M(Oxidation (M))|F}D{M(Oxidation (M))|F}[KA]EN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]GVTD{M(Oxidation (M))|F}D{M(Oxidation (M))|F}[KA]EN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]KED{M(Oxidation (M))|F}D{M(Oxidation (M))|F}[KA]EN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.0511;2.7237;2.6918;2.3644 -;-;-;- 5476 1 1.271 106765.0 0.9900000095367432 10004 4891 14881 HBL1_DMSO_200M_050219_2,14897 HBL1_DMSO_200M_050219_2,14897, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14898 78.475 780.0 217690.0 25 0 36643.0 -1 YDEFEYCWDTF 11 128 787.7927438750855 1573.570934816971 2 788.2949706912041 MULTI CID FTMS 0 0 0 14881 230454.5 1.0 0 0.0 17 Carbamidomethyl (C) _YDEFEYC(Carbamidomethyl (C))WDTF_ ENSG00000179750|ENST00000333467|APOBEC3B;nc|ENSG00000179750|Q9UH17-3|APOBEC3B 1.3295316138638542 0.8688751186870782 4 YYD{M(Oxidation (M))|F}N[WC(Carbamidomethyl (C))]Y 8 -1 38.085 0.0 0.0 2.4203 0.0 0.0 344.132654642946 0.0 344.132654642946 0.0 20.516609670558594 0.0 0.0 0 0.0 0.0 0.0 1.1989700043360187 YYD{M(Oxidation (M))|F}N[WC(Carbamidomethyl (C))]Y 2.4203 - 1780 + 1 1.271 117593.7 1.0 10005 4891 14881 HBL1_DMSO_200M_050219_2,14898 HBL1_DMSO_200M_050219_2,14898,YDEFEYCWDTF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14899 78.489 800.0 190090.0 25 0 12070.0 -1 0 126 994.4479022310828 1986.881251528965 2 994.449267566204 MULTI CID FTMS 0 0 0 14881 209752.046875 0.5505606074612538 8 -0.745025634765625 18 4 [{I|L}T][YQ]{I|L}{M(Oxidation (M))|F}N[C(Carbamidomethyl (C))H]YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 15 -1 + 69.751 0.0 0.0 3.5106 3.5106 70.496 0.0 0.0 0.0 2.7422750325201406 2.7422750325201406 2.7422750325201406 4.393326938302621 0 0.0 2.0 0.6109243748081782 1.9361818737241727 [{I|L}T][YQ]{I|L}{M(Oxidation (M))|F}N[C(Carbamidomethyl (C))H]YNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{I|L}T][YQ]{I|L}{M(Oxidation (M))|F}N[C(Carbamidomethyl (C))H]YQD{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{I|L}T][YQ]{I|L}ENY[NS]NNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{I|L}T][YQ]{I|L}QDY[NS]NNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{I|L}T][YQ]{I|L}{M(Oxidation (M))|F}N[C(Carbamidomethyl (C))H]QYD{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{I|L}T][YQ]{I|L}{M(Oxidation (M))|F}N[WC(Carbamidomethyl (C))]NNE{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{I|L}T][YQ]{I|L}{M(Oxidation (M))|F}N[C(Carbamidomethyl (C))H]YQ{I|L}D{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{I|L}T][YQ]{I|L}ENY[NS]NQD{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{I|L}T][YQ]{I|L}QDY[NS]NQD{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[{I|L}T][YQ]{I|L}{M(Oxidation (M))|F}N[WC(Carbamidomethyl (C))]NQD{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.5106;3.2895;3.1135;3.0506;3.0269;2.9273;2.8978;2.8924;2.8295;2.7062 -;-;-;-;-;-;-;-;-;- 10887 + 1 1.271 106044.3 0.949999988079071 10006 4891 14881 HBL1_DMSO_200M_050219_2,14899 HBL1_DMSO_200M_050219_2,14899, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14900 78.493 210.0 198480.0 25 0 12158.0 + 12386 GTIDEIQKLHI 11 90 422.90619685800255 1265.6967611742075 3 423.2399780154228 MULTI CID FTMS 0 0 0 14881 209319.21875 0.120680791499329 2 -0.1356887817382812 19 Unmodified _GTIDEIQKLHI_ ENSG00000167986|ENST00000301764|DDB1 29.28111348798908 0.4046731465847057 4 DE{I|L}QK{I|L}H{I|L} 8 3 31.611 0.0 0.0 2.4975 0.0 0.0 271.1513396302411 0.0 271.1513396302411 0.0 24.409364162281257 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + DE{I|L}QK{I|L}H{I|L} 2.4975 + + 128 + 1 1.271 46166.0 1.0 10007 4891 14881 HBL1_DMSO_200M_050219_2,14900 HBL1_DMSO_200M_050219_2,14900,GTIDEIQKLHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14901 78.5 301.0 374370.0 25 0 51791.0 + 7354 EGAIMLLK 8 130 437.756913617115 873.49927430103 2 437.7579223513603 MULTI CID FTMS 0 0 0 14881 179652.609375 0.264973934867543 2 -0.1356887817382812 20 Unmodified _EGAIMLLK_ REV__ENSG00000122966|ENST00000392521|CIT;REV__ENST00000537607.5_1_12:120126039-120222037:-|nuORF;REV__ENST00000545913.5_1_12:120126039-120222037:-|nuORF;REV__nc|ENSG00000122966|O14578-3|CIT;REV__nc|ENSG00000122966|O14578|CIT 21.74664581756881 0.5868176546531598 4 {[DA]|[EG]}A{I|L}{I|L}MK{I|L} 8 -1 + 37.384 0.0 0.0 4.2798 4.2798 83.007 0.0 0.0 0.0 12.94746863620552 2.2540235919061686 2.2540235919061686 27.300796044975243 0 0.9419628234359578 1.5228787452803376 0.0 0.1923877696554315 {[DA]|[EG]}A{I|L}{I|L}MK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[WE]S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}P{[MS]|[{M(Oxidation (M))|F}A]}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[WE]TV 4.2798;1.1544;1.0502;0.69599;0.15261 -;-;-;-;- 418 + 1 1.271 90648.4 1.0 10008 4891 14881 HBL1_DMSO_200M_050219_2,14901 HBL1_DMSO_200M_050219_2,14901,EGAIMLLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14903 78.505 11.0 3921500.0 25 0 526080.0 + 18269 KVIEINPYL 9 69 544.8209068109068 1087.6272606886134 2 544.8213989138603 MULTI CID FTMS 0 0 0 14902 4379367.0 0.846471058489167 1 -0.0537033081054687 1 Unmodified _KVIEINPYL_ ENSG00000100804|ENST00000361611|PSMB5;ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000100804|P28074-2|PSMB5;nc|ENSG00000204264|P28062-2|PSMB8 47.74868867922204 0.0453060283459952 4 E{I|L}NPY{I|L} 6 3 50.891 0.0 0.0 4.6791 0.0 0.0 340.24812514472814 0.0 340.24812514472814 0.0 23.44335023848103 0.0 0.0 0 1.6237125054200234 0.0 0.3494850021680094 0.4247425010840047 + E{I|L}NPY{I|L} 4.6791 + + 58 1 1.271 45849.3 1.0 10009 4892 14902 HBL1_DMSO_200M_050219_2,14903 HBL1_DMSO_200M_050219_2,14903,KVIEINPYL True True KVIEINPYL 78.504821 544.82139891386 82916080.0 14902.0 nc|ENSG00000100804|P28074-2|PSMB5;;ENSG00000100804|ENST00000361611|PSMB5;;ENSG00000204264|ENST00000374882|PSMB8;;nc|ENSG00000204264|P28062-2|PSMB8 5.818770249684651 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14904 78.506 29.0 1770900.0 25 0 220360.0 35959 SVPNKDVFQEL 11 65 638.332530858804 1274.650508784408 2 638.3332397341728 MULTI CID FTMS 0 0 0 14902 1749670.875 0.9900642509883232 1 -0.0537033081054687 2 Unmodified _SVPNKDVFQEL_ ENSG00000115919|ENST00000264170|KYNU 23.78978130925829 0.5336113198261219 4 [VS]PYQ{M(Oxidation (M))|F}VDK 9 7 72.445 0.0 0.0 5.6835 0.0 0.0 0.0 208.0729158990844 208.0729158990844 54.88228758605111 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 1.1989700043360187 [VS]PYQ{M(Oxidation (M))|F}VDK 5.6835 - 365 + 1 1.271 44006.4 1.0 10010 4892 14902 HBL1_DMSO_200M_050219_2,14904 HBL1_DMSO_200M_050219_2,14904,SVPNKDVFQEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14905 78.507 26.0 2478200.0 25 0 326870.0 + 3114 AVPEIMDRI 9 66 522.2804697847683 1042.5463866363366 2 522.2817870974541 MULTI CID FTMS 0 0 0 14902 1684503.375 0.4303463917462563 -2 0.2675857543945312 3 Unmodified _AVPEIMDRI_ ENSG00000068366|ENST00000672401|ACSL4;ENSG00000123983|ENST00000357430|ACSL3;nc|ENSG00000068366|O60488|ACSL4 31.26834338654808 0.1333407332142048 4 {[VA]|[{I|L}G]}PE{I|L}MDR{I|L} 9 0 + 71.916 0.0 0.0 6.8981 6.8981 92.553 0.0 0.0 0.0 41.73902187720806 11.478174818886371 11.478174818886371 18.962505624616384 0 0.3494850021680094 2.0 0.3807196863200844 0.0 + + {[VA]|[{I|L}G]}PE{I|L}MDR{I|L};{[VA]|[{I|L}G]}PE{I|L}M{[RE]|[WV]}V;{[VA]|[{I|L}G]}{I|L}[EP]MDR{I|L};[HK]M{I|L}MDR{I|L};{[VA]|[{I|L}G]}{I|L}[EP]M{[RE]|[WV]}V;[HK]M{I|L}M{[RE]|[WV]}V 6.8981;5.0793;4.7344;3.4879;2.9156;1.669 +;-;-;-;-;- + 141 + 1 1.271 57448.5 1.0 10011 4892 14902 HBL1_DMSO_200M_050219_2,14905 HBL1_DMSO_200M_050219_2,14905,AVPEIMDRI False True AVPEIMDRI 78.507177 522.281787097454 67770016.0 14902.0 ENSG00000068366|ENST00000672401|ACSL4;;ENSG00000123983|ENST00000357430|ACSL3;;nc|ENSG00000068366|O60488|ACSL4 4.683156569798787 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14906 78.508 31.0 2271300.0 25 0 235680.0 + 7411 FIINGIEKV 9 101 516.7427532489527 1031.4709535647053 2 516.7435790896416 MULTI CID FTMS 0 0 0 14902 1120909.625 0.2461051704695652 2 -0.1996612548828125 4 Unmodified _EGLDLHYW_ nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B;ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B 20.871210003555333 0.6025813472596342 4 {I|L}GG{[VA]|[{I|L}G]}EKV 8 6 26.578 0.0 0.0 2.5767 0.0 0.0 260.0214433410055 0.0 260.0214433410055 0.0 9.314851995670027 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.75 {I|L}GG{[VA]|[{I|L}G]}EKV 2.5767 - 311 + 1 1.271 58452.7 1.0 10012 4892 14902 HBL1_DMSO_200M_050219_2,14906 HBL1_DMSO_200M_050219_2,14906,EGLDLHYW False False FIINGIEKV 78.508357 516.743579089642 7369068.5 14902.0 nc|ENSG00000125630|Q9H9Y6-3|POLR1B;;nc|ENSG00000125630|Q9H9Y6-5|POLR1B;;ENSG00000125630|ENST00000263331|POLR1B;;nc|ENSG00000125630|Q9H9Y6-2|POLR1B 4.436203400293986 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14907 78.51 59.0 755790.0 25 0 129250.0 + 23020 LSIVSTVMIFR 11 76 633.3691586956885 1264.723764458177 2 633.3690063357353 MULTI CID FTMS 0 0 0 14902 900433.0 0.4475556696549837 5 -0.45684814453125 5 Unmodified _LSIVSTVMIFR_ REV__ENSG00000205359|ENST00000506729|SLCO6A1;REV__nc|ENSG00000205359|Q86UG4-2|SLCO6A1 5.296884461304476 0.8501568894076437 4 [{I|L}V]TV 4 -1 19.87 0.0 0.0 1.5711 0.0 0.0 0.0 849.431289442805 849.431289442805 16.375175252488248 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.5 0.0 [{I|L}V]TV 1.5711 - 79 1 1.271 40422.0 1.0 10013 4892 14902 HBL1_DMSO_200M_050219_2,14907 HBL1_DMSO_200M_050219_2,14907,LSIVSTVMIFR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14908 78.511 45.0 1375100.0 25 0 184940.0 + 44820 YPNLQLREI 9 72 573.3190146919329 1144.6234764506655 2 573.3196288943291 MULTI CID FTMS 0 0 0 14902 831178.5625 0.7847661207765627 -2 0.2675857543945312 6 Unmodified _YPNLQLREI_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 28.23362336080872 0.1719529537093671 4 YPN{I|L}Q{I|L}WV{I|L} 9 2 + 84.259 0.0 0.0 7.3613 7.3613 90.405 0.0 0.0 0.0 55.84308865449384 8.253671847721236 8.253671847721236 9.208187539523747 0 0.3054621874040891 1.3979400086720375 0.0 1.1989700043360187 YPN{I|L}Q{I|L}WV{I|L};YPGG{I|L}Q{I|L}WV{I|L};YPN{I|L}[AG]{I|L}WV{I|L};YPGG{I|L}[AG]{I|L}WV{I|L};[{M(Oxidation (M))|F}V]{[VA]|[{I|L}G]}{I|L}Q{I|L}N{[QN]|[E{I|L}]|[KN]};[{M(Oxidation (M))|F}V]{[VA]|[{I|L}G]}{I|L}Q{I|L}GG{[QN]|[E{I|L}]|[KN]};[{M(Oxidation (M))|F}V]P[WK]{I|L}N{[QN]|[E{I|L}]|[KN]};[{I|L}P]NT[KS]N{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{M(Oxidation (M))|F}V]{[VA]|[{I|L}G]}{I|L}[AG]{I|L}N{[QN]|[E{I|L}]|[KN]};[KA][SG][WK]{I|L}N{[QN]|[E{I|L}]|[KN]} 7.3613;6.5569;6.1858;4.7087;2.8552;2.0545;1.8677;1.6862;1.6835;1.217 -;-;-;-;-;-;-;-;-;- 231 + 1 1.271 54453.8 1.0 10014 4892 14902 HBL1_DMSO_200M_050219_2,14908 HBL1_DMSO_200M_050219_2,14908,YPNLQLREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14909 78.513 55.0 571120.0 25 0 43786.0 + 30612 RFFDTNTSVL 10 63 600.3063606922871 1198.598168451374 2 600.3064453005791 MULTI CID FTMS 0 0 0 14902 781559.5625 0.5417448816938236 1 -0.0537033081054687 7 Unmodified _RFFDTNTSVL_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 38.61474834105838 0.1721950110283317 4 DTNTSV{I|L} 7 3 61.701 0.0 0.0 5.1477 0.0 0.0 450.2370472638688 0.0 450.2370472638688 0.0 47.98918221526151 0.0 0.0 0 0.8252574989159953 0.0 1.424742501084005 0.0 + DTNTSV{I|L} 5.1477 + + 133 1 1.271 29014.2 1.0 10015 4892 14902 HBL1_DMSO_200M_050219_2,14909 HBL1_DMSO_200M_050219_2,14909,RFFDTNTSVL False True RFFDTNTSVL 78.512506 600.306445300579 28183056.0 14902.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 9.15309969584147 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14910 78.514 50.0 1399300.0 25 0 145680.0 + 39935 VFVDRTLDL 9 83 539.3006855291252 1076.5868181250505 2 539.3011962771416 MULTI CID FTMS 0 0 0 14902 758456.375 0.156591654227392 -8 0.9050369262695312 8 Unmodified _VFVDRTLDL_ ENSG00000184178|ENST00000401642|SCFD2;nc|ENSG00000184178|Q8WU76-2|SCFD2 38.61474834105838 0.0830609365873449 4 V{M(Oxidation (M))|F}VD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KP]{I|L} 9 4 + 49.742 0.0 0.0 4.6203 4.6203 83.947 0.0 0.0 0.0 13.99616613955164 7.080977788579119 7.080977788579119 23.20030223399044 0 0.8494850021680094 0.8860566476931632 0.0 0.3054621874040891 V{M(Oxidation (M))|F}VD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KP]{I|L};V{M(Oxidation (M))|F}VD[{M(Oxidation (M))|F}V][VG]PV;V{M(Oxidation (M))|F}VD[{M(Oxidation (M))|F}V][{I|L}A][PA];V{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[DV][VG]PV;V{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[DV][{I|L}A][PA];{NN|[MP]|[D{I|L}]|[EV]}VV{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}V{I|L} 4.6203;2.4653;2.3753;2.2592;2.1692;1.6251 -;-;-;-;-;- 369 + 1 1.271 63312.7 1.0 10016 4892 14902 HBL1_DMSO_200M_050219_2,14910 HBL1_DMSO_200M_050219_2,14910,VFVDRTLDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14911 78.516 127.0 770230.0 25 0 46212.0 + + -1 FQWDPQQPRL 10 101 657.7722646425308 1313.5299763518617 2 657.7731811404228 MULTI CID FTMS 0 0 0 14902 496029.1875 0.2673473494689883 -2 0.2675857543945312 9 Oxidation (M) _VDEPETM(Oxidation (M))EVSY_ ENSG00000116213|ENST00000270708|WRAP73 13.042465956692816 0.7638483625850725 4 SY 2 -1 26.326 0.0 0.0 2.0042 0.0 0.0 1045.4238255483624 0.0 1045.4238255483624 0.0 -3.152264344352467 -3.152264344352467 0.0 0 0.4247425010840047 0.0 0.2614393726401688 0.0 SY 2.0042 + + 488 + 1 1.271 75326.5 1.0 10017 4892 14902 HBL1_DMSO_200M_050219_2,14911 HBL1_DMSO_200M_050219_2,14911,VDEPETMEVSY False False FQWDPQQPRL 78.516461 657.773181140423 1404928.25 14902.0 ENSG00000116213|ENST00000270708|WRAP73 0.3244481161236763 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14912 78.519 129.0 863950.0 25 0 60592.0 + -1 NYPAFMMEM 9 127 575.2235879880571 1148.4326230429142 2 575.2247192263603 MULTI CID FTMS 0 0 0 14902 425000.96875 0.8355708969845421 1 -0.0537033081054687 10 Oxidation (M) _NYPAFMMEM(Oxidation (M))_ nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 32.30548876998284 0.1201446275138228 4 [YN]{[WN]|[YH]}ET[YC(Carbamidomethyl (C))] 8 -1 + 34.269 0.0 0.0 2.9839 2.9839 72.503 0.0 0.0 0.0 7.128493362984763 16.656205609827246 7.128493362984763 7.435755758420729 0 0.4247425010840047 2.0 0.0 0.2396518287104437 [YN]{[WN]|[YH]}ET[YC(Carbamidomethyl (C))];[PA]{M(Oxidation (M))|F}MMET[YC(Carbamidomethyl (C))];[{I|L}P][DC]M{M(Oxidation (M))|F}T[YC(Carbamidomethyl (C))];[YN]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[WN]|[YH]}C(Carbamidomethyl (C))V;{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}MET[YC(Carbamidomethyl (C))];[PA]{M(Oxidation (M))|F}MM{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[YN]{[WN]|[YH]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[CP]|[EA]}{[QN]|[E{I|L}]|[KN]}E{[WN]|[YH]}C(Carbamidomethyl (C))V;{[CP]|[EA]}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[HQ]E{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][WP]{M(Oxidation (M))|F}T[YC(Carbamidomethyl (C))] 2.9839;2.3365;1.5561;1.5347;1.4524;1.2702;1.2435;0.98921;0.70864;0.70369 -;-;-;-;-;-;-;-;-;- 206 1 1.271 89023.1 1.0 10018 4892 14902 HBL1_DMSO_200M_050219_2,14912 HBL1_DMSO_200M_050219_2,14912,NYPAFMMEM False False NYPAFMMEM 78.519111 575.2253 11168246.0 14902.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 3.5490238269170127 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14913 78.521 68.0 962540.0 25 0 161800.0 + 2285 AQIAEGMAYI 10 79 533.7656604358976 1065.5167679385952 2 533.7657348513603 MULTI CID FTMS 0 0 0 14902 423951.90625 0.7354709044022233 -1 0.0819854736328125 11 Unmodified _AQIAEGMAYI_ ENSG00000136573|ENST00000259089|BLK;ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 13.90604991867851 0.6142120002215601 4 [{I|L}V][WP]Q{I|L}{I|L}V 8 9 23.553 0.0 0.0 2.2105 0.0 0.0 0.0 113.9247018587702 113.9247018587702 7.35531242661758 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.3252574989159953 [{I|L}V][WP]Q{I|L}{I|L}V 2.2105 - 101 1 1.271 56371.3 1.0 10019 4892 14902 HBL1_DMSO_200M_050219_2,14913 HBL1_DMSO_200M_050219_2,14913,AQIAEGMAYI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14914 78.523 83.0 610950.0 25 0 41898.0 + 25338 NALDKVLSV 9 89 479.78160281544143 957.5486526976828 2 479.7812377810478 MULTI CID FTMS 0 0 0 14902 407457.75 0.1831699486520272 2 -0.1996612548828125 12 Unmodified _NALDKVLSV_ ENSG00000159063|ENST00000299626|ALG8;ENST00000524925.1_1_11:77817969-77825348:-|nuORF;nc|ENSG00000159063|Q9BVK2-2|ALG8 38.17557092003332 0.0854718145212029 4 {[QG]|[NA]}{I|L}D 4 5 40.049 0.0 0.0 4.1825 0.0 0.0 0.0 541.3356417291624 541.3356417291624 23.94348130295128 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[QG]|[NA]}{I|L}D 4.1825 + + 238 + 1 1.271 44134.2 1.0 10020 4892 14902 HBL1_DMSO_200M_050219_2,14914 HBL1_DMSO_200M_050219_2,14914,NALDKVLSV True True NALDKVLSV 78.522604 479.781237781048 32210346.0 14902.0 ENSG00000159063|ENST00000299626|ALG8;;ENST00000524925.1_1_11:77817969-77825348:-|nuORF;;nc|ENSG00000159063|Q9BVK2-2|ALG8 6.37949275970459 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14915 78.525 122.0 467540.0 25 0 46118.0 + 12228 GQVGHILEL 9 87 483.2743209468617 964.5340889605234 2 483.2747070193291 MULTI CID FTMS 0 0 0 14902 325265.125 0.4833908982023692 1 -0.0537033081054687 13 Unmodified _GQVGHILEL_ ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;nc|ENSG00000146918|Q86XI2-2|NCAPG2 24.020572477871973 0.2255576514309169 4 [VG]H{I|L}{I|L}NAE{I|L} 9 4 + 42.692 0.0 0.0 4.4261 4.4261 67.614 0.0 0.0 0.0 1.1539341870206954 16.478174818886373 1.1539341870206954 1.1539341870206954 0 0.4247425010840047 0.6989700043360187 0.0 0.0 [VG]H{I|L}{I|L}NAE{I|L};{[HG]|PP}V{I|L}{I|L}NAE{I|L};[VG]H{I|L}{[QG]|[NA]}{I|L}E{I|L};{[HG]|PP}{I|L}V{I|L}NAE{I|L};{[HG]|PP}V{I|L}{[QG]|[NA]}{I|L}E{I|L};[H{I|L}]GV{I|L}NAE{I|L};{[HG]|PP}{I|L}V{[QG]|[NA]}{I|L}E{I|L};[VG]H{I|L}{I|L}E{[QG]|[NA]}{I|L};[H{I|L}]GV{[QG]|[NA]}{I|L}E{I|L};{[HG]|PP}V{I|L}{I|L}E{[QG]|[NA]}{I|L} 4.4261;4.3065;4.0957;3.9944;3.976;3.925;3.6639;3.6512;3.5945;3.5316 -;-;-;-;-;-;-;-;-;- 447 1 1.271 48503.1 1.0 10021 4892 14902 HBL1_DMSO_200M_050219_2,14915 HBL1_DMSO_200M_050219_2,14915,GQVGHILEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14916 78.529 196.0 620490.0 25 0 71508.0 + 21705 LPLRVPGL 8 105 432.7867275479063 863.5589021626125 2 432.7868224978447 MULTI CID FTMS 0 0 0 14902 314651.03125 0.6933206478362274 5 -0.45684814453125 14 Unmodified _LPLRVPGL_ REV__ENSG00000171714|ENST00000324559|ANO5 26.34127834903884 0.4900704351052977 4 {I|L}P{I|L} 3 -1 45.802 0.0 0.0 5.3039 0.0 0.0 0.0 537.3163546197874 537.3163546197874 31.197887582883936 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}P{I|L} 5.3039 + + 85 + 1 1.271 98442.4 1.0 10022 4892 14902 HBL1_DMSO_200M_050219_2,14916 HBL1_DMSO_200M_050219_2,14916,LPLRVPGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14917 78.532 167.0 409260.0 25 0 27364.0 + 16413 IYTNFGMSY 9 99 548.2440595925862 1094.4735662519722 2 548.2443115115166 MULTI CID FTMS 0 0 0 14902 288798.9375 0.9370436678597078 -1 0.0819854736328125 15 Unmodified _IYTNFGMSY_ ENST00000476781.5_1_3:179316545-179319539:-|nuORF 13.50788311687929 0.4710407108020397 4 SY 2 7 24.464 0.0 0.0 2.2352 0.0 0.0 826.3672145073327 0.0 826.3672145073327 0.0 13.043966869934652 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + SY 2.2352 + + 169 + 1 1.271 59258.7 1.0 10023 4892 14902 HBL1_DMSO_200M_050219_2,14917 HBL1_DMSO_200M_050219_2,14917,IYTNFGMSY False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14918 78.535 128.0 421690.0 25 0 53487.0 + 28613 PVELGSHTL 9 87 476.75905372370704 951.503554514214 2 476.7586852908134 MULTI CID FTMS 0 0 0 14902 281690.4375 0.2063853127357413 2 -0.1996612548828125 16 Unmodified _PVELGSHTL_ REV__ENSG00000176422|ENST00000338146|SPRYD4 42.09456458481378 0.0639583784996157 4 [{I|L}T][YN]D{I|L}T{I|L} 8 -1 + 49.359 0.0 0.0 5.1874 5.1874 70.917 0.0 0.0 0.0 9.286662482156345 14.031600362424768 9.286662482156345 1.249387366082999 0 0.5 1.5228787452803376 0.8494850021680094 0.0 [{I|L}T][YN]D{I|L}T{I|L};[{I|L}T][MN]{M(Oxidation (M))|F}{I|L}T{I|L};[{I|L}T][YN]{I|L}DT{I|L};[{I|L}T]V[YQ]DT{I|L};[VP]EVPV{[CP]|[EA]}{I|L};{[TV]|[{I|L}S]}[YQ]D{I|L}T{I|L};[{I|L}T][YN]S{I|L}E{I|L};[{I|L}T][YN]{I|L}SE{I|L};[VP]{I|L}DPV{[CP]|[EA]}{I|L};{[TV]|[{I|L}S]}[YQ]{I|L}DT{I|L} 5.1874;5.0561;4.5547;4.3215;4.2114;4.117;3.8441;3.7128;3.71;3.4843 -;-;-;-;-;-;-;-;-;- 388 1 1.271 48359.3 1.0 10024 4892 14902 HBL1_DMSO_200M_050219_2,14918 HBL1_DMSO_200M_050219_2,14918,PVELGSHTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14919 78.543 460.0 180590.0 25 0 30039.0 + 25596 NFILKIKYDSL 11 104 451.9324689753993 1352.775577526398 3 451.9327880740166 MULTI CID FTMS 0 0 0 14902 207960.6875 1.0 0 0.0 17 Unmodified _NFILKIKYDSL_ REV__ENSG00000165124|ENST00000374469|SVEP1;REV__ENST00000467821.1_1_9:113205816-113312285:-|nuORF;REV__nc|ENSG00000165124|Q4LDE5-4|SVEP1 2.9952420565917617 0.861016188266951 4 {I|L} 1 -1 11.259 0.0 0.0 0.83229 0.0 0.0 1221.68060484749 0.0 1221.68060484749 0.0 0.7745097999287154 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.83229 + + 42 + 1 1.271 81202.5 1.0 10025 4892 14902 HBL1_DMSO_200M_050219_2,14919 HBL1_DMSO_200M_050219_2,14919,NFILKIKYDSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14920 78.546 160.0 579990.0 25 0 77769.0 + + 16059 RIDPALLTV 9 108 499.3056879973005 996.596823061401 2 499.3063842654228 MULTI CID FTMS 0 0 0 14902 207166.609375 0.3916366509622059 -2 0.2675857543945312 18 Unmodified _ITLPRPTSL_ ENSG00000188211|ENST00000338965|NCR3LG1 26.88365393820708 0.1891292719743517 4 {NN|[MP]|[D{I|L}]|[EV]}R[PA]{I|L}{I|L}TV 9 -1 + 40.326 0.0 0.0 4.0464 4.0464 68.316 0.0 0.0 0.0 2.2442373877630857 2.2442373877630857 2.2442373877630857 2.2442373877630857 0 1.0994850021680094 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}R[PA]{I|L}{I|L}TV;[{M(Oxidation (M))|F}V]{I|L}[VP]QVPV;[{M(Oxidation (M))|F}V]{I|L}[VP]N{I|L}PV;[{M(Oxidation (M))|F}V]{I|L}[VP][AG]VPV;[{M(Oxidation (M))|F}V]{I|L}[VP]GG{I|L}PV;[{M(Oxidation (M))|F}V]{I|L}[VP]N[VP]{I|L};[NP]AA[KA]{I|L}{I|L}TV;[QA][KG][PA]{I|L}{I|L}TV;{[TV]|[{I|L}S]}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}EV;[NP]AA{I|L}[KA]{I|L}TV 4.0464;3.8212;3.3425;2.8973;2.4185;2.2877;2.2381;1.6398;1.6011;1.5368 -;-;-;-;-;-;-;-;-;- 498 1 1.271 76892.0 1.0 10026 4892 14902 HBL1_DMSO_200M_050219_2,14920 HBL1_DMSO_200M_050219_2,14920,ITLPRPTSL False False RIDPALLTV 78.546084 499.306384265423 4100071.5 14902.0 ENSG00000188211|ENST00000338965|NCR3LG1 5.347049713134766 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14921 78.551 279.0 531370.0 25 0 153140.0 + 37757 TLRNAAKVHEI 11 102 626.3616014067157 1250.7086498802314 2 627.3675414919853 MULTI CID FTMS 0 0 0 14902 198375.328125 0.5855860015289046 6 -0.62835693359375 19 Unmodified _TLRNAAKVHEI_ REV__ENSG00000180611|ENST00000392452|MB21D2 4.897010918128616 0.8520435188433833 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A 3 -1 19.666 0.0 0.0 1.5724 0.0 0.0 0.0 932.5265874625156 932.5265874625156 7.993201395314049 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A 1.5724 - 200 1 1.271 110977.2 1.0 10027 4892 14902 HBL1_DMSO_200M_050219_2,14921 HBL1_DMSO_200M_050219_2,14921,TLRNAAKVHEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14922 78.554 127.0 633220.0 25 0 56733.0 + 12842 GVVDPRAISVL 11 102 563.3348653606411 1124.655177788082 2 563.3359863162041 MULTI CID FTMS 0 0 0 14902 191553.75 0.083616815927 -4 0.4477615356445312 20 Unmodified _GVVDPRAISVL_ ENSG00000244687|ENST00000371674|UBE2V1;ENST00000483534.5_1_20:48699307-48713022:-|nuORF;nc|ENSG00000244687|Q13404-1|UBE2V1;nc|ENSG00000244687|Q13404-2|UBE2V1;nc|ENSG00000244687|Q13404-6|UBE2V1;nc|ENSG00000244687|Q13404-7|UBE2V1 42.312485326615175 0.1767732348921932 4 SVDRV{I|L} 6 6 55.482 0.0 0.0 4.9333 0.0 0.0 437.2748280255875 0.0 437.2748280255875 0.0 20.47228775315752 0.0 0.0 0 0.6505149978319906 0.0 1.5356668758921828 0.0 SVDRV{I|L} 4.9333 - 609 1 1.271 71689.1 1.0 10028 4892 14902 HBL1_DMSO_200M_050219_2,14922 HBL1_DMSO_200M_050219_2,14922,GVVDPRAISVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14924 78.559 14.0 4010000.0 25 0 478710.0 + 42853 VVLGEFGVRNV 11 59 594.8403550962885 1187.6661572593769 2 594.8409301638603 MULTI CID FTMS 0 0 0 14923 3566492.5 0.9140040567104 1 -0.1459579467773437 1 Unmodified _VVLGEFGVRNV_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;ENST00000512472.5_1_6:43484832-43487226:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 40.72490554402381 0.2012291192650359 4 VV{I|L}GE{M(Oxidation (M))|F}R 7 4 82.779 0.0 0.0 6.9699 0.0 0.0 0.0 384.2000826471313 384.2000826471313 74.36259170921218 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.3807196863200844 VV{I|L}GE{M(Oxidation (M))|F}R 6.9699 - 122 + 1 1.279 51109.2 1.0 10029 4893 14923 HBL1_DMSO_200M_050219_2,14924 HBL1_DMSO_200M_050219_2,14924,VVLGEFGVRNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14925 78.561 127.0 196270.0 25 0 18951.0 19797 LGSLTDLKLTF 11 55 604.3486961834969 1206.6828394337938 2 604.3490478396416 MULTI CID FTMS 0 0 0 14923 452552.03125 0.9792321173926452 1 -0.1459579467773437 2 Unmodified _LGSLTDLKLTF_ ENST00000525566.5_2_12:104742385-104742472:+|nuORF 1.1933415558491238 0.8695176722560516 4 W 1 11 6.9897 0.0 0.0 0.57925 0.0 0.0 602.4054479316438 415.1739596002563 1017.5794075319002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.57925 - 4 + 1 1.279 22354.9 1.0 10030 4893 14923 HBL1_DMSO_200M_050219_2,14925 HBL1_DMSO_200M_050219_2,14925,LGSLTDLKLTF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14926 78.564 160.0 544950.0 25 0 76730.0 -1 IYIWCYSIC 9 101 407.5191507935497 1219.5356229808492 3 407.5194885134697 MULTI CID FTMS 0 0 0 14923 453498.5 0.2626316048936219 -2 0.1356887817382812 3 Carbamidomethyl (C) _IYIWC(Carbamidomethyl (C))YSIC_ ENST00000379997.7_1_9:27561302-27561452:-|nuORF 5.731851221503515 0.7145881442174411 4 [Y{I|L}][WQ]Y{I|L} 6 -1 32.893 0.0 0.0 2.6971 0.0 0.0 0.0 350.0825339518055 350.0825339518055 16.906592950506365 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 [Y{I|L}][WQ]Y{I|L} 2.6971 - 425 1 1.279 74385.9 1.0 10031 4893 14923 HBL1_DMSO_200M_050219_2,14926 HBL1_DMSO_200M_050219_2,14926,IYIWCYSIC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14927 78.566 73.0 757110.0 25 0 67560.0 + 3365 AYPYYASAF 9 96 526.7394344491722 1051.4643159651444 2 526.7404052615166 MULTI CID FTMS 0 0 0 14923 428548.28125 0.3209092587147983 -2 0.1356887817382812 4 Unmodified _AYPYYASAF_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 26.34127834903884 0.1960301806784604 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AYS 5 5 39.693 0.0 0.0 3.775 0.0 0.0 0.0 467.1935999829756 467.1935999829756 5.403536391899664 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.5 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AYS 3.775 - 524 1 1.279 48939.1 1.0 10032 4893 14923 HBL1_DMSO_200M_050219_2,14927 HBL1_DMSO_200M_050219_2,14927,AYPYYASAF False True AYPYYASAF 78.565985 526.740405261517 28237420.0 14923.0 ENSG00000244038|ENST00000602624|DDOST;;nc|ENSG00000244038|P39656|DDOST;;nc|ENSG00000244038|P39656-3|DDOST;;nc|ENSG00000244038|P39656-2|DDOST 4.572472254435222 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14928 78.568 115.0 625790.0 25 0 102250.0 + 36130 SVTDLAFKV 9 102 490.2758526936171 978.5371524540342 2 490.2767516970634 MULTI CID FTMS 0 0 0 14923 393558.8125 0.3831553543709113 -2 0.1356887817382812 5 Unmodified _SVTDLAFKV_ ENSG00000061273|ENST00000080059|HDAC7;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7 53.832793166522166 0.0319663582346103 4 [VS]TD{I|L}A{M(Oxidation (M))|F}KV 9 0 + 75.945 0.0 0.0 7.7611 7.7611 94.823 0.0 0.0 0.0 39.53377376411949 11.962724883926654 11.962724883926654 18.62756757724155 0 1.0629529932484498 2.0 0.0 0.2742275032520141 + + [VS]TD{I|L}A{M(Oxidation (M))|F}KV;[VS]T{[VA]|[{I|L}G]}E{M(Oxidation (M))|F}KV;[VS]T{[VA]|[{I|L}G]}V{I|L}[YQ];[{I|L}P][RP]{I|L}DT[PA];[VS]T{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[VS]T{[VA]|[{I|L}G]}V[YQ]{I|L};[VS]T{[VA]|[{I|L}G]}[R{M(Oxidation (M))|F}]TV;[VS]T[R{I|L}]{I|L}[YQ];[VS]T{[VA]|[{I|L}G]}[YQ]{I|L}V;[{I|L}P]DPV{[VA]|[{I|L}G]}T[PA] 7.7611;5.8574;3.9686;3.9163;3.8983;3.3675;3.3637;3.3066;3.1379;2.9592 +;-;-;-;-;-;-;-;-;- + 645 + 1 1.279 58766.6 1.0 10033 4893 14923 HBL1_DMSO_200M_050219_2,14928 HBL1_DMSO_200M_050219_2,14928,SVTDLAFKV True True SVTDLAFKV 78.568388 490.276751697063 14952247.0 14923.0 nc|ENSG00000061273|Q8WUI4-3|HDAC7;;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;;nc|ENSG00000061273|Q8WUI4-2|HDAC7;;nc|ENSG00000061273|Q8WUI4|HDAC7;;nc|ENSG00000061273|Q8WUI4-6|HDAC7;;nc|ENSG00000061273|Q8WUI4-10|HDAC7;;nc|ENSG00000061273|Q8WUI4-7|HDAC7;;nc|ENSG00000061273|Q8WUI4-9|HDAC7;;ENSG00000061273|ENST00000080059|HDAC7;;nc|ENSG00000061273|Q8WUI4-4|HDAC7;;nc|ENSG00000061273|Q8WUI4-8|HDAC7 6.565021832784017 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14929 78.571 143.0 368320.0 25 0 42043.0 + 991 AFTQTDVATF 10 90 550.7666246508803 1099.5186963685603 2 550.7672607302666 MULTI CID FTMS 0 0 0 14923 291461.75 0.7671392331516074 -1 0.0537033081054687 6 Unmodified _AFTQTDVATF_ ENSG00000255154|ENST00000461393|HTD2 15.847184025352805 0.5816416552707754 4 T{M(Oxidation (M))|F} 2 8 20.701 0.0 0.0 1.8827 0.0 0.0 833.3915524201351 0.0 833.3915524201351 0.0 1.827125221306645 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 + T{M(Oxidation (M))|F} 1.8827 + + 170 + 1 1.279 45063.9 1.0 10034 4893 14923 HBL1_DMSO_200M_050219_2,14929 HBL1_DMSO_200M_050219_2,14929,AFTQTDVATF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14930 78.585 800.0 350650.0 25 0 78378.0 + 45946 YYYDPTTGLYY 11 157 709.8107300331268 1417.6069071330537 2 709.8126098513603 MULTI CID FTMS 0 0 0 14923 233653.390625 0.2195319176948121 -2 0.1356887817382812 7 Unmodified _YYYDPTTGLYY_ ENSG00000003756|ENST00000347869|RBM5;ENST00000489437.1_1_3:50144918-50148299:+|nuORF 65.23502041540118 0.047899150100457 4 [TP]{[SA]|[TG]}{I|L}YDYYYY 11 8 + 76.982 0.0 0.0 5.4305 5.4305 73.493 0.0 0.0 0.0 6.451303731446998 16.575773191777934 6.451303731446998 2.015449934959719 0 0.9247425010840048 0.8860566476931632 2.166386562212267 0.0 [TP]{[SA]|[TG]}{I|L}YDYYYY;[TP]{[SA]|[TG]}{I|L}YYDYYY;[TP]{[SA]|[TG]}Y{I|L}DYYYY;{[TV]|[{I|L}S]}A[TP]YDYYYY;{[VA]|[{I|L}G]}T[TP]YDYYYY;[TP]{[SA]|[TG]}{I|L}DYYYYY;[TP]{[SA]|[TG]}Y{I|L}YDYYY;{[VA]|[{I|L}G]}{[DA]|[EG]}{I|L}YDYYYY;{[TV]|[{I|L}S]}A[TP]YYDYYY;[{I|L}T]G[TP]YDYYYY 5.4305;5.2883;5.0016;4.9754;4.9302;4.8644;4.8595;4.837;4.8332;4.7976 -;-;-;-;-;-;-;-;-;- 13195 1 1.279 195599.2 0.9900000095367432 10035 4893 14923 HBL1_DMSO_200M_050219_2,14930 HBL1_DMSO_200M_050219_2,14930,YYYDPTTGLYY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14931 78.588 118.0 514730.0 25 0 56671.0 + 38003 TNVTNFITV 9 106 504.7710843860994 1007.5276158389988 2 504.7723266482353 MULTI CID FTMS 0 0 0 14923 229224.515625 0.4023303804616827 -1 0.0537033081054687 8 Unmodified _TNVTNFITV_ REV__ENSG00000113845|ENST00000494664|TIMMDC1 34.93206674587334 0.1032771302489716 4 {[QS]|[NT]}V{M(Oxidation (M))|F}{I|L}SQS{I|L} 9 -1 + 53.893 0.0 0.0 5.349 5.349 70.348 0.0 0.0 0.0 5.536502144102897 8.072420927871988 5.536502144102897 0.5829473318510665 0 1.1677353201839438 0.0 0.6307196863200843 0.3054621874040891 {[QS]|[NT]}V{M(Oxidation (M))|F}{I|L}SQS{I|L};{[QS]|[NT]}ADK{M(Oxidation (M))|F}{I|L}S{I|L};{[TV]|[{I|L}S]}N{M(Oxidation (M))|F}{I|L}SQS{I|L};{[QS]|[NT]}V{M(Oxidation (M))|F}{[QS]|[NT]}{I|L}S{I|L};{[QS]|[NT]}V{M(Oxidation (M))|F}{I|L}S[AG]S{I|L};{[QS]|[NT]}V{M(Oxidation (M))|F}{I|L}ST{[QV]|[N{I|L}]|[RA]|[KV]};[VG]AS{M(Oxidation (M))|F}{I|L}SQS{I|L};{[TV]|[{I|L}S]}N{M(Oxidation (M))|F}{[QS]|[NT]}{I|L}S{I|L};{[TV]|[{I|L}S]}GG{M(Oxidation (M))|F}{I|L}SQS{I|L};{[TV]|[{I|L}S]}N{M(Oxidation (M))|F}{I|L}S[AG]S{I|L} 5.349;5.2911;4.7995;4.4634;4.435;4.2127;4.0824;3.9139;3.8855;3.8855 -;-;-;-;-;-;-;-;-;- 648 1 1.279 52796.8 1.0 10036 4893 14923 HBL1_DMSO_200M_050219_2,14931 HBL1_DMSO_200M_050219_2,14931,TNVTNFITV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14932 78.592 236.0 263940.0 25 0 44148.0 29393 QLASRETSDSS 11 109 394.18764760802935 1179.541113424288 3 394.1877014040947 MULTI CID FTMS 0 0 0 14923 200109.296875 1.0 0 0.0 9 Unmodified _QLASRETSDSS_ ENSG00000170011|ENST00000302541|MYRIP;nc|ENSG00000170011|Q8NFW9-2|MYRIP;nc|ENSG00000170011|Q8NFW9-3|MYRIP;nc|ENSG00000170011|Q8NFW9-4|MYRIP;nc|ENSG00000170011|Q8NFW9-5|MYRIP;nc|ENSG00000170011|Q8NFW9-6|MYRIP 5.731851221503515 0.8481046878870278 4 [Q{I|L}][HC]DW 6 8 16.923 0.0 0.0 1.4348 0.0 0.0 0.0 394.2099270130456 394.2099270130456 5.814243664528579 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 [Q{I|L}][HC]DW 1.4348 - 62 1 1.279 56330.8 1.0 10037 4893 14923 HBL1_DMSO_200M_050219_2,14932 HBL1_DMSO_200M_050219_2,14932,QLASRETSDSS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14933 78.599 376.0 327750.0 25 0 21998.0 + -1 LPLCPVSSTV 10 172 536.7881336104912 0 536.7877075076103 PEAK CID FTMS 0 0 0 14923 163816.328125 1.0 0 0.0 10 Carbamidomethyl (C) _LPLC(Carbamidomethyl (C))PVSSTV_ REV__ENSG00000135248|ENST00000621392|GARIN1B;REV__ENST00000493738.5_1_7:128354060-128363382:+|nuORF;REV__nc|ENSG00000135248|Q96KD3|GARIN1B 34.10243960390752 0.1735552622300722 4 TDVKVW 6 -1 20.226 0.0 0.0 1.8875 0.0 0.0 117.089437531726 223.0727480524047 340.1621855841307 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 TDVKVW 1.8875 - 705 + 1 1.279 105573.0 1.0 10038 4893 14923 HBL1_DMSO_200M_050219_2,14933 HBL1_DMSO_200M_050219_2,14933,LPLCPVSSTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14934 78.603 231.0 414040.0 25 0 37625.0 + 41767 VPVEPVLTV 9 128 476.788960506967 951.563368080734 2 476.7897521853447 MULTI CID FTMS 0 0 0 14923 147829.34375 1.0 0 0.0 11 Unmodified _VPVEPVLTV_ ENSG00000100941|ENST00000216832|PNN 36.506200033944 0.094635877243972 4 [VP]EVPV{I|L}TV 9 2 + 59.364 0.0 0.0 6.2386 6.2386 81.387 0.0 0.0 0.0 13.521825181113629 16.478174818886373 13.521825181113629 4.771212547196626 0 0.8252574989159953 1.154901959985743 0.0 0.0 [VP]EVPV{I|L}TV;[VP]{I|L}DPV{I|L}TV;[VP]VEPV{I|L}TV;[VP]EVP{I|L}VTV;[VP]{I|L}DP{I|L}VTV;[VP]VPEV{I|L}TV;[{I|L}V]PDPV{I|L}TV;[VP]VEP{I|L}VTV;[{I|L}T]V[HA]V{I|L}TV;[VP]VPE{I|L}VTV 6.2386;5.7372;5.4209;5.4209;4.9194;4.9194;4.8176;4.6031;4.5382;4.1017 -;-;+;-;-;-;-;-;-;- + 758 1 1.279 79699.2 1.0 10039 4893 14923 HBL1_DMSO_200M_050219_2,14934 HBL1_DMSO_200M_050219_2,14934,VPVEPVLTV True True VPVEPVLTV 78.603044 476.789752185345 1582785.0 14923.0 ENSG00000100941|ENST00000216832|PNN 3.3368798891703286 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14935 78.617 800.0 160920.0 25 0 8468.4 + -1 LPPSVLGL 8 150 795.8973017448586 0 795.8967773318291 PEAK CID FTMS 0 0 0 14923 124915.078125 0.979047248856124 1 -0.1459579467773437 12 Carbamidomethyl (C) _C(Carbamidomethyl (C))LTWRERERER_ ENST00000424043.3_1_1:92580458-92580773:-|nuORF 4.189502756095605 0.4761840153648598 4 NA{M(Oxidation (M))|F}ADQQE{I|L}QS 11 -1 51.298 0.0 0.0 3.2267 0.0 0.0 227.12656493816468 128.07180200748283 355.19836694564754 0.0 0.0 0.0 0.0 0 2.6237125054200234 0.0 0.6694451763165201 1.3609243748081783 NA{M(Oxidation (M))|F}ADQQE{I|L}QS 3.2267 - 6010 + 1 1.279 92194.5 0.75 10040 4893 14923 HBL1_DMSO_200M_050219_2,14935 HBL1_DMSO_200M_050219_2,14935,CLTWRERERER False False LPPSVLGL 78.616891 795.896777331829 80210.4375 14923.0 ENST00000424043.3_1_1:92580458-92580773:-|nuORF 0.9712339242299398 1.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14936 78.621 233.0 271680.0 25 0 24286.0 + 33336 SFYPRNITL 9 100 555.8006977428303 1109.5868425524604 2 555.7993652224541 MULTI CID FTMS 0 0 0 14923 126292.4921875 0.8625369069332744 -1 0.0537033081054687 13 Unmodified _SFYPRNITL_ ENSG00000204516|ENST00000252229|MICB;nc|ENSG00000204516|Q29980-2|MICB 26.268140514670165 0.1969607489560049 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y 3 6 34.705 0.0 0.0 3.1277 0.0 0.0 0.0 709.4009891841689 709.4009891841689 14.12696976716136 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y 3.1277 + + 183 + 1 1.279 54318.8 1.0 10041 4893 14923 HBL1_DMSO_200M_050219_2,14936 HBL1_DMSO_200M_050219_2,14936,SFYPRNITL False True SFYPRNITL 78.621277 555.799365222454 1298648.875 14923.0 nc|ENSG00000204516|Q29980-2|MICB;;ENSG00000204516|ENST00000252229|MICB 5.95254373550415 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14937 78.633 587.0 198090.0 25 0 24048.0 + 28965 QDKGALSL 8 146 416.2337945049651 830.4530360767302 2 416.2341796755791 MULTI CID FTMS 0 0 0 14923 123802.1875 0.7938660026118404 -2 0.1356887817382812 14 Unmodified _QDKGALSL_ REV__ENSG00000133800|ENST00000256178|LYVE1 49.93300154707207 0.1395624531867191 4 {[TV]|[{I|L}S]}MPA{I|L}S{I|L} 8 -1 + 57.803 0.0 0.0 6.9604 6.9604 81.28 0.0 0.0 0.0 8.240312677277188 16.40978057358332 8.240312677277188 3.0102999566398125 0 0.9247425010840048 1.3979400086720375 1.024227503252014 0.0 {[TV]|[{I|L}S]}MPA{I|L}S{I|L};{[TV]|[{I|L}S]}MPAS{I|L}{I|L};{[TV]|[{I|L}S]}MAP{I|L}S{I|L};{[TV]|[{I|L}S]}[NG]GA{I|L}S{I|L};{[TV]|[{I|L}S]}MAPS{I|L}{I|L};[{I|L}V][CS]P{I|L}S{I|L};{[TV]|[{I|L}S]}[NG]Q{I|L}S{I|L};{[TV]|[{I|L}S]}[NG]GAS{I|L}{I|L};[PS]P{M(Oxidation (M))|F}A{I|L}S{I|L};[{I|L}V][CS]PS{I|L}{I|L} 6.9604;6.5979;6.4473;6.3036;6.0849;5.9682;5.9474;5.9411;5.6756;5.6057 -;-;-;-;-;-;-;-;-;- 456 1 1.279 90229.6 1.0 10042 4893 14923 HBL1_DMSO_200M_050219_2,14937 HBL1_DMSO_200M_050219_2,14937,QDKGALSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14938 78.647 800.0 206510.0 25 0 32748.0 8711 EVLFFIKPLGF 11 187 655.3824352675513 1308.7503176019025 2 655.3823730349541 MULTI CID FTMS 0 0 0 14923 108764.703125 0.070140412198977 -8 0.7776718139648438 15 Unmodified _EVLFFIKPLGF_ ENST00000262061.6_1_12:54745315-54745399:+|nuORF 6.2057823575117 0.8458686499021061 4 {NN|[MP]|[D{I|L}]|[EV]}WK{I|L} 5 7 30.956 0.0 0.0 2.3653 0.0 0.0 0.0 650.3778560142649 650.3778560142649 14.068912073401734 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.1747425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}WK{I|L} 2.3653 - 645 1 1.279 131274.3 0.6000000238418579 10043 4893 14923 HBL1_DMSO_200M_050219_2,14938 HBL1_DMSO_200M_050219_2,14938,EVLFFIKPLGF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14939 78.657 601.0 251970.0 25 0 21136.0 -1 0 191 367.23365165149823 732.4527503697965 2 367.2336913943291 MULTI CID FTMS 0 0 0 14923 106554.5390625 0.6376266641359163 -1 0.0537033081054687 16 4 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}{I|L}V 6 -1 + 27.241 0.0 0.0 3.7191 3.7191 67.244 0.0 0.0 0.0 4.215817701185287 11.756368635175605 4.215817701185287 2.218487496163561 0 0.6989700043360187 0.0 0.0 0.535666875892183 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}{I|L}V;{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}{M(Oxidation (M))|F}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}]NV 3.7191;3.4163;1.229;0.53058 -;-;-;- 120 1 1.279 118580.0 1.0 10044 4893 14923 HBL1_DMSO_200M_050219_2,14939 HBL1_DMSO_200M_050219_2,14939, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14940 78.672 800.0 110400.0 25 0 8337.2 + 45741 YYIGDIHPSDL 11 127 646.8118774294853 0 646.8118774294853 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _YYIGDIHPSDL_ ENSG00000103018|ENST00000307892|CYB5B;ENST00000514123.5_1_16:69458586-69482095:+|nuORF;ENST00000568342.2_1_16:69481073-69493037:+|nuORF 21.53697664764585 0.3337597044351383 4 {I|L} 1 10 11.237 0.0 0.0 0.87001 0.0 0.0 326.124695693767 849.3714356745738 1175.496131368341 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L} 0.87001 + + 159 + 1 1.279 71139.9 0.5699999928474426 10045 4893 14923 HBL1_DMSO_200M_050219_2,14940 HBL1_DMSO_200M_050219_2,14940,YYIGDIHPSDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14941 78.686 800.0 66400.0 25 0 16359.0 -1 0 49 1162.7937076028318 3485.3592934086955 3 1163.462573230267 MULTI CID FTMS 0 0 0 14923 85697.7890625 0.5499857355802761 -10 1.0183868408203125 18 4 E 1 -1 6.9897 0.0 0.0 0.20054 0.0 0.0 2829.131339809365 524.1624239557249 3353.29376376509 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20054 - 24 + 1 1.279 48628.5 0.5199999809265137 10046 4893 14923 HBL1_DMSO_200M_050219_2,14941 HBL1_DMSO_200M_050219_2,14941, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14942 78.7 800.0 146960.0 25 0 13892.0 5416 DLLKLNVAPLA 11 151 583.8601313459715 1165.7057097587428 2 583.8604614138603 MULTI CID FTMS 0 0 0 14923 83459.0 0.962962362017712 -1 0.0537033081054687 19 Unmodified _DLLKLNVAPLA_ ENSG00000152082|ENST00000281871|MZT2B;ENSG00000173272|ENST00000309451|MZT2A;ENST00000480182.1_1_2:130940128-130948196:+|nuORF;ENST00000485869.1_1_2:130940017-130940434:+|nuORF 5.296884461304476 0.8501568894076437 4 {NN|[MP]|[D{I|L}]|[EV]}AW 4 8 19.693 0.0 0.0 1.6893 0.0 0.0 0.0 677.4576683371209 677.4576683371209 8.979400086720375 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}AW 1.6893 - 248 1 1.279 88896.4 0.6100000143051147 10047 4893 14923 HBL1_DMSO_200M_050219_2,14942 HBL1_DMSO_200M_050219_2,14942,DLLKLNVAPLA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14944 78.704 9.1 7274300.0 25 0 578860.0 + 13628 HPPSHWPLI 9 95 542.2906042372043 1082.5666555412083 2 542.2910644412041 MULTI CID FTMS 0 0 0 14943 5285247.5 0.8980819075216062 1 -0.0768280029296875 1 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 89.42679046578446 0.015225546354407 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L} 9 2 + 61.806 0.0 0.0 5.7092 5.7092 72.694 0.0 0.0 0.0 5.642492736872597 25.81978040647691 5.642492736872597 0.9948500216800936 0 1.7346368802282015 0.0 1.336696871556164 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWPH{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPPH{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L} 5.7092;5.6173;4.8944;4.5769;4.4715;3.854;3.7315 -;-;-;-;-;-;- 506 1 1.29 57080.9 1.0 10048 4894 14943 HBL1_DMSO_200M_050219_2,14944 HBL1_DMSO_200M_050219_2,14944,HPPSHWPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14945 78.706 20.0 1929100.0 25 0 276110.0 39689 VEERNLLSV 9 49 529.7957777133807 1057.5770024935614 2 529.7963744997978 MULTI CID FTMS 0 0 0 14943 1306151.125 0.2356088892199939 3 -0.2571868896484375 2 Unmodified _VEERNLLSV_ ENSG00000108953|ENST00000264335|YWHAE;ENST00000486241.1_1_17:1265194-1303470:-|nuORF;ENST00000489287.1_1_17:1268113-1303470:-|nuORF;nc|ENSG00000108953|P62258-2|YWHAE 18.1463463914782 0.3454829746528889 4 D{I|L}{I|L}W 4 7 36.938 0.0 0.0 3.4927 0.0 0.0 512.269823142775 0.0 512.269823142775 0.0 16.480625354554377 0.0 0.0 0 0.5 0.0 0.0 0.0 D{I|L}{I|L}W 3.4927 - 32 1 1.29 38230.2 1.0 10049 4894 14943 HBL1_DMSO_200M_050219_2,14945 HBL1_DMSO_200M_050219_2,14945,VEERNLLSV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14946 78.707 20.0 3534400.0 25 0 284990.0 -1 TVPWDICNLC 10 71 610.7752606010433 1219.5359682688866 2 610.7762328982353 MULTI CID FTMS 0 0 0 14943 2673284.5 0.9990582271612144 -1 0.1459579467773437 3 Carbamidomethyl (C) _TVPWDIC(Carbamidomethyl (C))NLC_ ENST00000303329.8_1_15:80886456-80886687:+|nuORF 7.289230182591677 0.6929195370588109 4 {I|L}YYV 4 -1 20.904 0.0 0.0 1.7141 0.0 0.0 353.1062850536112 325.1277865045532 678.2340715581644 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 {I|L}YYV 1.7141 - 141 + 1 1.29 57264.3 1.0 10050 4894 14943 HBL1_DMSO_200M_050219_2,14946 HBL1_DMSO_200M_050219_2,14946,TVPWDICNLC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14947 78.708 15.0 4401800.0 25 0 754740.0 + 3709 DAFPNIDKI 9 85 516.7719558592959 1031.5293587853917 2 516.7724487185478 MULTI CID FTMS 0 0 0 14943 2364019.0 0.8860237436713433 -1 0.1459579467773437 4 Unmodified _DAFPNIDKI_ ENSG00000107362|ENST00000333421|ABHD17B;nc|ENSG00000107362|Q5VST6-2|ABHD17B 32.89776655970281 0.1144444835665315 4 {[DA]|[EG]}{M(Oxidation (M))|F}PN{I|L}DK{I|L} 9 0 + 61.398 0.0 0.0 5.9521 5.9521 83.349 0.0 0.0 0.0 25.991531334132887 8.372505457509973 8.372505457509973 7.730012720637376 0 0.7302046884880937 1.5228787452803376 0.805462187404089 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}PN{I|L}DK{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}[NP]DK{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}PGG{I|L}DK{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}[QT]{I|L}[QP];{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}YYK{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}[QT][QP]{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}[WR][QP];{[DA]|[EG]}{M(Oxidation (M))|F}[WR]{I|L}[QP];{[DA]|[EG]}{M(Oxidation (M))|F}[WR][QP]{I|L} 5.9521;5.2027;5.0594;4.1064;3.601;3.4288;3.0445;3.0445;2.3669 +;-;-;-;-;-;-;-;- + 175 + 1 1.29 54304.3 1.0 10051 4894 14943 HBL1_DMSO_200M_050219_2,14947 HBL1_DMSO_200M_050219_2,14947,DAFPNIDKI True True DAFPNIDKI 78.708016 516.7731 41873724.0 14943.0 nc|ENSG00000107362|Q5VST6-2|ABHD17B;;ENSG00000107362|ENST00000333421|ABHD17B 6.274922529856364 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14948 78.709 20.0 3719600.0 25 0 469840.0 + 5035 DGWTPLHV 8 106 462.73228478493735 923.4500166366748 2 462.7326537966728 MULTI CID FTMS 0 0 0 14943 2291430.0 0.237560160332866 -2 0.1996612548828125 5 Unmodified _DGWTPLHV_ ENSG00000183475|ENST00000332783|ASB7;nc|ENSG00000183475|Q9H672-2|ASB7 49.66892048692302 0.1408045912742846 4 {[QD]|[EN]|[WG]|[KD]|[RS]}DTP{I|L}VH 8 4 {[QD]|[EN]|[WG]|[KD]|[RS]}D + + 28.418 12.249 3.4203 3.0773 3.0773 46.09 0.0 0.0 0.0 0.0 5.74153794511119 0.0 0.0 0 0.5994850021680094 0.0 0.3494850021680094 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}DTP{I|L}VH 3.0773 - 145 + 1 1.29 60678.6 1.0 10052 4894 14943 HBL1_DMSO_200M_050219_2,14948 HBL1_DMSO_200M_050219_2,14948,DGWTPLHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14949 78.71 31.0 1933400.0 25 0 197270.0 15531 IPVLANFIV 9 79 493.30756668585485 984.6005804385096 2 493.3081848025322 MULTI CID FTMS 0 0 0 14943 1687776.125 0.2824014341805273 30 -3.1751251220703125 6 Unmodified _IPVLANFIV_ ENSG00000146085|ENST00000274813|MMUT 21.74664581756881 0.2544899275067181 4 {I|L}P 2 7 43.711 0.0 0.0 4.4395 0.0 0.0 0.0 771.4430302961379 771.4430302961379 7.64468757338242 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}P 4.4395 + + 204 + 1 1.29 50979.3 1.0 10053 4894 14943 HBL1_DMSO_200M_050219_2,14949 HBL1_DMSO_200M_050219_2,14949,IPVLANFIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14950 78.712 23.0 2017600.0 25 0 229930.0 + 19475 LFHEVVQAF 9 69 545.2901251080391 1088.565697282878 2 545.2907592654228 MULTI CID FTMS 0 0 0 14943 1360039.75 0.8310036886931199 -1 0.1459579467773437 7 Unmodified _LFHEVVQAF_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000487214.1_1_1:889839-894659:-|nuORF 26.88365393820708 0.1891292719743517 4 EVVQA{M(Oxidation (M))|F} 6 3 34.341 0.0 0.0 3.1547 0.0 0.0 397.2114735334 0.0 397.2114735334 0.0 17.351453248366795 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.0 + EVVQA{M(Oxidation (M))|F} 3.1547 + + 115 1 1.29 41069.0 1.0 10054 4894 14943 HBL1_DMSO_200M_050219_2,14950 HBL1_DMSO_200M_050219_2,14950,LFHEVVQAF False True LFHEVVQAF 78.711551 545.290759265423 12929217.0 14943.0 ENSG00000188976|ENST00000327044|NOC2L;;ENST00000487214.1_1_1:889839-894659:-|nuORF 7.261559168497722 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14951 78.713 35.0 1633500.0 25 0 111820.0 + 41867 VPYPLPKI 8 88 463.78933281423656 925.5641126952733 2 464.2912170290947 MULTI CID FTMS 0 0 0 14943 958918.4375 0.7273794618242639 1 -0.0768280029296875 8 Unmodified _VPYPLPKI_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1 38.15118350030904 0.2652218139009398 4 [VP]YP{I|L}PK{I|L} 8 0 + 48.453 0.0 0.0 5.235 5.235 77.313 0.0 0.0 0.0 25.776782865503705 7.544873321858503 7.544873321858503 4.771212547196626 0 0.805462187404089 1.6989700043360187 0.0 0.0 + + [VP]YP{I|L}PK{I|L};[VP]{I|L}{M(Oxidation (M))|F}{I|L}PK{I|L} 5.235;4.7195 +;- + 93 + 1 1.29 50315.7 1.0 10055 4894 14943 HBL1_DMSO_200M_050219_2,14951 HBL1_DMSO_200M_050219_2,14951,VPYPLPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14952 78.714 57.0 899160.0 25 0 168160.0 + 2994 AVIHEAPAVLL 11 66 566.8399617877486 1131.6653706422971 2 566.8405639529228 MULTI CID FTMS 0 0 0 14943 831233.25 0.4598971939619883 2 -0.2058868408203125 9 Unmodified _AVIHEAPAVLL_ ENSG00000146232|ENST00000619360|NFKBIE;nc|ENSG00000146232|O00221|NFKBIE 17.04857598603903 0.6805168445818576 4 {[VA]|[{I|L}G]}[H{I|L}]EAPAV{I|L}{I|L} 11 0 + 45.119 0.0 0.0 3.9869 3.9869 78.631 0.0 0.0 0.0 5.650321115721866 24.712828295296063 5.650321115721866 9.58607314841774 0 0.7742275032520141 0.958607314841775 0.0 0.0 + + {[VA]|[{I|L}G]}[H{I|L}]EAPAV{I|L}{I|L};{[CP]|[EA]}H[{I|L}V]APAV{I|L}{I|L};[EP]{I|L}[HQ]{I|L}AV{I|L}{I|L} 3.9869;3.1399;1.7156 +;-;- + 86 1 1.29 48014.0 1.0 10056 4894 14943 HBL1_DMSO_200M_050219_2,14952 HBL1_DMSO_200M_050219_2,14952,AVIHEAPAVLL False True AVIHEAPAVLL 78.714172 566.840563952923 36427248.0 14943.0 nc|ENSG00000146232|O00221|NFKBIE;;ENSG00000146232|ENST00000619360|NFKBIE 6.597361882527669 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14953 78.716 88.0 1061300.0 25 0 164000.0 + 30889 RIPEQIIVV 9 83 533.8348105728094 1065.6550682124189 2 533.8351928591728 MULTI CID FTMS 0 0 0 14943 797081.75 0.8567326150558807 -3 0.281646728515625 10 Unmodified _RIPEQIIVV_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 24.99096001346401 0.2132109383330889 4 [{I|L}V][WP]Q{I|L}{I|L}VV 9 2 + 59.454 0.0 0.0 5.5791 5.5791 82.763 0.0 0.0 0.0 9.030899869919438 16.478174818886373 9.030899869919438 9.030899869919438 0 0.805462187404089 1.3010299956639813 0.0 0.3494850021680094 [{I|L}V][WP]Q{I|L}{I|L}VV;[R{I|L}][EP]Q{I|L}{I|L}VV;[{I|L}V][WP][AG]{I|L}{I|L}VV;[R{I|L}][EP][AG]{I|L}{I|L}VV 5.5791;4.7317;4.3871;3.8676 -;+;-;- + 57 1 1.29 83747.8 1.0 10057 4894 14943 HBL1_DMSO_200M_050219_2,14953 HBL1_DMSO_200M_050219_2,14953,RIPEQIIVV False True RIPEQIIVV 78.716137 533.835192859173 53011464.0 14943.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 6.02029275894165 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14954 78.718 58.0 1129500.0 25 0 219590.0 + 3716 DAFPSIDKI 9 85 503.26524488069657 1004.5159368281932 2 503.2668334841728 MULTI CID FTMS 0 0 0 14943 735738.4375 0.4018232041596387 -7 0.700408935546875 11 Unmodified _DAFPSIDKI_ ENSG00000136379|ENST00000258884|ABHD17C 41.95555342248728 0.0647214845423414 4 {[DA]|[EG]}{M(Oxidation (M))|F}PS{I|L}DK{I|L} 9 0 + 71.653 0.0 0.0 7.1331 7.1331 91.34 0.0 0.0 0.0 34.57087980413743 11.962724883926654 11.962724883926654 10.740312677277188 0 0.8807196863200843 1.5228787452803376 0.805462187404089 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}PS{I|L}DK{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}[PS]DK{I|L} 7.1331;6.0639 +;- + 149 + 1 1.29 55568.1 1.0 10058 4894 14943 HBL1_DMSO_200M_050219_2,14954 HBL1_DMSO_200M_050219_2,14954,DAFPSIDKI True True DAFPSIDKI 78.717576 503.266833484173 11329681.0 14943.0 ENSG00000136379|ENST00000258884|ABHD17C 6.886440594991048 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14955 78.722 249.0 260370.0 25 0 66458.0 + 44399 YLWTVLAVILY 11 83 677.3950612702711 1352.775569607342 2 677.3958007693291 MULTI CID FTMS 0 0 0 14943 454616.46875 0.9100515288502008 1 -0.0768280029296875 12 Unmodified _YLWTVLAVILY_ REV__L1ME1_dup14741|chr8:25510836-25512219:-|2.1947036737014773|0.2188578600898351|3.33|48.0|44|2|sense 3.5964929083625545 0.858179447565866 4 YY 2 -1 13.188 0.0 0.0 0.97485 0.0 0.0 1008.6376129196452 0.0 1008.6376129196452 0.0 3.5834938564822494 0.0 0.0 0 0.0 0.0 0.0 0.0 YY 0.97485 - 37 + 1 1.29 63802.8 1.0 10059 4894 14943 HBL1_DMSO_200M_050219_2,14955 HBL1_DMSO_200M_050219_2,14955,YLWTVLAVILY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14956 78.724 83.0 767350.0 25 0 65186.0 + 32330 RYLPQCSYF 9 97 588.7790415134806 1175.543530093761 2 588.7795898318291 MULTI CID FTMS 0 0 0 14943 446101.75 0.3216705096683745 2 -0.2058868408203125 13 Unmodified _RYLPQCSYF_ ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2 29.081581746732265 0.1611639662936252 4 {[ET]|[MV]}{I|L}[WK]CSY{M(Oxidation (M))|F} 9 4 + 44.174 0.0 0.0 3.7578 3.7578 65.649 0.0 0.0 0.0 1.276423530973105 14.973024840566469 1.276423530973105 1.276423530973105 0 0.8807196863200843 0.0 0.9715141619232908 0.0 {[ET]|[MV]}{I|L}[WK]CSY{M(Oxidation (M))|F};[YR]{I|L}[QP]CSY{M(Oxidation (M))|F};[YR]P[Q{I|L}]CSY{M(Oxidation (M))|F};{[ET]|[MV]}{I|L}[YN]{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F};[YR][WD]{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F};[YR]P{[CT]|[{M(Oxidation (M))|F}G]}{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F} 3.7578;3.6492;2.9872;1.7568;1.0972;0.9863 -;+;-;-;-;- + 138 1 1.29 50284.1 1.0 10060 4894 14943 HBL1_DMSO_200M_050219_2,14956 HBL1_DMSO_200M_050219_2,14956,RYLPQCSYF False True RYLPQCSYF 78.724103 588.779589831829 49965828.0 14943.0 nc|ENSG00000118971|P30279-2|CCND2;;ENSG00000118971|ENST00000261254|CCND2 7.229134877522786 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14957 78.727 126.0 680050.0 25 0 66805.0 + 35950 SVPLKVPGL 9 71 455.29206210657645 908.5695712799528 2 455.2919189333916 MULTI CID FTMS 0 0 0 14943 388355.46875 0.9547276684436188 1 -0.0768280029296875 14 Unmodified _SVPLKVPGL_ ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1 36.04419817259434 0.0971720506436186 4 [VS]P{I|L}KVPG{I|L} 9 0 + 52.546 0.0 0.0 5.7834 5.7834 80.608 0.0 0.0 0.0 5.713337517843655 5.713337517843655 5.713337517843655 5.713337517843655 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + + [VS]P{I|L}KVPG{I|L};[VS]VVK{I|L}P[PA];[K{I|L}]V[TA]{I|L}P[PA] 5.7834;5.1546;1.8302 +;-;- + 117 + 1 1.29 69515.4 1.0 10061 4894 14943 HBL1_DMSO_200M_050219_2,14957 HBL1_DMSO_200M_050219_2,14957,SVPLKVPGL True True SVPLKVPGL 78.726684 455.291918933392 5144695.5 14943.0 nc|ENSG00000065000|O14617-2|AP3D1;;ENSG00000065000|ENST00000643116|AP3D1;;nc|ENSG00000065000|O14617-4|AP3D1;;nc|ENSG00000065000|O14617-3|AP3D1;;nc|ENSG00000065000|O14617|AP3D1 5.653451760609944 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14958 78.729 103.0 648740.0 25 0 33857.0 + 25111 MPYPAPNVPVV 11 99 592.3122931769489 1182.6100334206976 2 592.3113281130791 MULTI CID FTMS 0 0 0 14943 317865.8125 0.2481924033751628 -3 0.281646728515625 15 Unmodified _MPYPAPNVPVV_ ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB 32.30548876998284 0.3336598821591509 4 [VP]NDH[HA]V 8 9 33.567 0.0 0.0 2.8384 0.0 0.0 0.0 310.1769315479985 310.1769315479985 7.880325230808161 0.0 0.0 0.0 0 0.5 2.0 0.0 0.3494850021680094 [VP]NDH[HA]V 2.8384 - 423 1 1.29 59725.1 1.0 10062 4894 14943 HBL1_DMSO_200M_050219_2,14958 HBL1_DMSO_200M_050219_2,14958,MPYPAPNVPVV False True MPYPAPNVPVV 78.728895 592.311328113079 30551554.0 14943.0 nc|ENSG00000133961|P49757-6|NUMB;;nc|ENSG00000133961|P49757-7|NUMB;;nc|ENSG00000133961|P49757-5|NUMB;;nc|ENSG00000133961|P49757-3|NUMB;;nc|ENSG00000133961|P49757-9|NUMB;;ENSG00000133961|ENST00000555238|NUMB;;nc|ENSG00000133961|P49757-8|NUMB;;nc|ENSG00000133961|P49757-2|NUMB;;nc|ENSG00000133961|P49757-4|NUMB 7.342256228129069 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14959 78.732 145.0 294320.0 25 0 31872.0 + 2307 AQIEDLQVKL 10 80 578.8319407105776 1155.649328487955 2 578.8329955935478 MULTI CID FTMS 0 0 0 14943 301016.75 0.1809046668177627 2 -0.2058868408203125 16 Unmodified _AQIEDLQVKL_ ENSG00000157933|ENST00000378536|SKI 28.49450938151212 0.328477364964909 4 {[QN]|[E{I|L}]|[KN]}NEV{I|L}S 7 7 38.448 0.0 0.0 3.327 0.0 0.0 0.0 368.2136955135988 368.2136955135988 -6.4735426686651465 0.0 -6.4735426686651465 0.0 0 0.0 1.0969100130080565 0.0 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}NEV{I|L}S 3.327 - 470 1 1.29 39440.4 1.0 10063 4894 14943 HBL1_DMSO_200M_050219_2,14959 HBL1_DMSO_200M_050219_2,14959,AQIEDLQVKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14960 78.746 800.0 215710.0 25 0 27150.0 42003 VQPWGILLMLL 11 200 641.8822995054525 1281.7500460777048 2 641.8828613162041 MULTI CID FTMS 0 0 0 14943 235255.609375 0.3228180754257941 7 -0.7660980224609375 17 Unmodified _VQPWGILLMLL_ ENST00000451786.5_1_7:130737210-130792560:-|nuORF 4.897010918128616 0.8520435188433833 4 [{M(Oxidation (M))|F}V]Q{I|L}{I|L} 5 8 18.874 0.0 0.0 1.4725 0.0 0.0 0.0 678.3489524838008 678.3489524838008 7.658963840444549 0.0 0.0 0.0 0 0.0 0.5686362358410126 0.0 0.0 [{M(Oxidation (M))|F}V]Q{I|L}{I|L} 1.4725 - 588 + 1 1.29 130021.1 1.0 10064 4894 14943 HBL1_DMSO_200M_050219_2,14960 HBL1_DMSO_200M_050219_2,14960,VQPWGILLMLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14961 78.759 800.0 344880.0 25 0 16808.0 + 37688 TLNLLNAMEV 10 220 559.2976682806922 1116.5807836281842 2 559.2995483279228 MULTI CID FTMS 0 0 0 14943 181702.96875 0.6696889942977623 2 -0.2058868408203125 18 Unmodified _TLNLLNAMEV_ REV__ENSG00000105997|ENST00000612286|HOXA3;REV__ENSG00000128652|ENST00000683222|HOXD3 39.94969957227396 0.1580982266129622 4 {[TV]|[{I|L}S]}K[WQ]EVEV 9 -1 + 51.923 0.0 0.0 4.6502 4.6502 67.039 0.0 0.0 0.0 0.4478583093007415 2.548585626381943 0.4478583093007415 0.4478583093007415 0 0.1923877696554315 0.8239087409443188 1.4291746928241125 0.2396518287104437 {[TV]|[{I|L}S]}K[WQ]EVEV;[EP]R{M(Oxidation (M))|F}{I|L}EVEV;{[QN]|[E{I|L}]|[KN]}WT{I|L}EVEV;{[TV]|[{I|L}S]}K[WC(Carbamidomethyl (C))]PVEV;{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}T{I|L}EVEV;{NN|[MP]|[D{I|L}]|[EV]}[WK][QT]VEV;[VP]W{M(Oxidation (M))|F}{I|L}EVEV;{[TV]|[{I|L}S]}KYT{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}V;[{I|L}T]{I|L}[MT]DPVEV;{NN|[MP]|[D{I|L}]|[EV]}PERE{I|L}{M(Oxidation (M))|F}V 4.6502;4.6101;4.3974;4.3806;4.1528;4.019;3.9428;3.9252;3.8584;3.8356 -;-;-;-;-;-;-;-;-;- 5270 1 1.29 207247.6 0.8100000023841858 10065 4894 14943 HBL1_DMSO_200M_050219_2,14961 HBL1_DMSO_200M_050219_2,14961,TLNLLNAMEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14962 78.763 169.0 643760.0 25 0 137270.0 + + -1 DAIHSMGLI 9 116 478.747431046694 955.480309160188 2 478.7472717165947 MULTI CID FTMS 0 0 0 14943 157137.140625 0.660883528277597 -1 0.1459579467773437 19 Oxidation (M) _HM(Oxidation (M))AGLEGLL_ ENSG00000134318|ENST00000315872|ROCK2 18.13498045792455 0.3457906370836843 4 GMS{[CT]|[{M(Oxidation (M))|F}G]}T{I|L} 7 -1 27.935 0.0 0.0 2.9237 0.0 0.0 244.17973771823875 0.0 244.17973771823875 0.0 -0.2445452568920387 -0.2445452568920387 0.0 0 0.2396518287104437 0.0 0.7614393726401688 0.0 GMS{[CT]|[{M(Oxidation (M))|F}G]}T{I|L} 2.9237 - 475 + 1 1.29 89555.0 1.0 10066 4894 14943 HBL1_DMSO_200M_050219_2,14962 HBL1_DMSO_200M_050219_2,14962,HMAGLEGLL False False DAIHSMGLI 78.762784 478.747271716595 1725069.75 14943.0 ENSG00000134318|ENST00000315872|ROCK2 0.3622546990712483 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14963 78.777 800.0 89177.0 25 0 13866.0 + 7562 EIKEQLVRRLS 11 125 685.9085801866416 1369.8026074400832 2 686.4105712771416 MULTI CID FTMS 0 0 0 14943 157405.921875 1.0 0 0.0 20 Unmodified _EIKEQLVRRLS_ REV__ENSG00000163681|ENST00000671191|SLMAP;REV__ENST00000467901.1_1_3:57743378-57875870:+|nuORF;REV__nc|ENSG00000163681|Q14BN4-2|SLMAP;REV__nc|ENSG00000163681|Q14BN4-3|SLMAP;REV__nc|ENSG00000163681|Q14BN4-6|SLMAP;REV__nc|ENSG00000163681|Q14BN4-7|SLMAP;REV__nc|ENSG00000163681|Q14BN4|SLMAP 4.897010918128616 0.8520435188433833 4 {I|L} 1 -1 10.485 0.0 0.0 0.76541 0.0 0.0 1238.7074669144956 0.0 1238.7074669144956 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.76541 + + 103 + 1 1.29 61740.3 0.8199999928474426 10067 4894 14943 HBL1_DMSO_200M_050219_2,14963 HBL1_DMSO_200M_050219_2,14963,EIKEQLVRRLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14965 78.781 13.0 4285700.0 25 0 620130.0 + 3115 AVPEIMDRI 9 63 522.2804697847683 1042.5463866363366 2 522.2819091677666 MULTI CID FTMS 0 0 0 14964 3130183.25 0.7996796486929388 1 -0.129058837890625 1 Unmodified _AVPEIMDRI_ ENSG00000068366|ENST00000672401|ACSL4;ENSG00000123983|ENST00000357430|ACSL3;nc|ENSG00000068366|O60488|ACSL4 24.99096001346401 0.2132109383330889 4 {[VA]|[{I|L}G]}PE{I|L}MD[R{I|L}] 9 0 + 68.874 0.0 0.0 6.6063 6.6063 75.1 0.0 0.0 0.0 19.488474775526186 0.4921802267018194 0.4921802267018194 0.4921802267018194 0 0.3494850021680094 2.0 0.3494850021680094 0.0 + + {[VA]|[{I|L}G]}PE{I|L}MD[R{I|L}];{[VA]|[{I|L}G]}PE{I|L}MWVV;{[VA]|[{I|L}G]}{I|L}[EP]MD[R{I|L}];{[VA]|[{I|L}G]}{I|L}[EP]MWVV 6.6063;6.5591;4.4726;4.4253 +;-;-;- + 67 + 1 1.29 53905.8 1.0 10068 4895 14964 HBL1_DMSO_200M_050219_2,14965 HBL1_DMSO_200M_050219_2,14965,AVPEIMDRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14966 78.783 49.0 1043100.0 25 0 129470.0 + 35960 SVPNKDVFQEL 11 75 638.332530858804 1274.650508784408 2 638.3331786990166 MULTI CID FTMS 0 0 0 14964 995898.875 0.563536770157981 4 -0.3865509033203125 2 Unmodified _SVPNKDVFQEL_ ENSG00000115919|ENST00000264170|KYNU 36.506200033944 0.2662161991516171 4 [VS]PYQ{M(Oxidation (M))|F}VDK 9 7 70.372 0.0 0.0 5.5209 0.0 0.0 0.0 208.0730990045532 208.0730990045532 50.50189682300783 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 1.2302046884880935 [VS]PYQ{M(Oxidation (M))|F}VDK 5.5209 - 273 + 1 1.29 43828.3 1.0 10069 4895 14964 HBL1_DMSO_200M_050219_2,14966 HBL1_DMSO_200M_050219_2,14966,SVPNKDVFQEL False True SVPNKDVFQEL 78.782626 638.333178699017 197229360.0 14964.0 ENSG00000115919|ENST00000264170|KYNU 4.826159636179606 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14967 78.784 57.0 1174100.0 25 0 78748.0 + 44821 YPNLQLREI 9 94 573.3190146919329 1144.6234764506655 2 573.3195068240166 MULTI CID FTMS 0 0 0 14964 921736.0 0.8702668929819828 1 -0.129058837890625 3 Unmodified _YPNLQLREI_ ENSG00000134644|ENST00000426105|PUM1;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671-4|PUM1;nc|ENSG00000134644|Q14671|PUM1 32.89776655970281 0.1144444835665315 4 YPN{I|L}Q{I|L}{[RE]|[WV]}{I|L} 9 0 + 80.345 0.0 0.0 7.0193 7.0193 87.903 0.0 0.0 0.0 62.18433447093204 3.4016622314967293 3.4016622314967293 8.45098040014257 0 0.7302046884880937 1.6989700043360187 0.4247425010840047 0.8494850021680094 + + YPN{I|L}Q{I|L}{[RE]|[WV]}{I|L};YPN{I|L}{I|L}Q{[RE]|[WV]}{I|L};YPN{I|L}[AG]{I|L}{[RE]|[WV]}{I|L};YPGG{I|L}Q{I|L}{[RE]|[WV]}{I|L};YPN{I|L}{I|L}[AG]{[RE]|[WV]}{I|L};YPGG{I|L}{I|L}Q{[RE]|[WV]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KA]VV{I|L}N{[QN]|[E{I|L}]|[KN]};[KA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VV{I|L}N{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RRRR{[QN]|[E{I|L}]|[KN]};{[QV]|[N{I|L}]|[RA]|[KV]}P[W{M(Oxidation (M))|F}][{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 7.0193;6.281;6.2149;6.2149;5.4765;5.4765;2.9839;1.723;1.5185;0.39841 +;-;-;-;-;-;-;-;-;- + 272 + 1 1.29 61240.7 1.0 10070 4895 14964 HBL1_DMSO_200M_050219_2,14967 HBL1_DMSO_200M_050219_2,14967,YPNLQLREI True True YPNLQLREI 78.784076 573.319506824017 27910374.0 14964.0 nc|ENSG00000134644|Q14671|PUM1;;nc|ENSG00000134644|Q14671-4|PUM1;;nc|ENSG00000134644|Q14671-2|PUM1;;ENSG00000134644|ENST00000426105|PUM1 4.374033292134603 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14968 78.786 112.0 420780.0 25 0 89292.0 + 23084 LSLVKNGYIMK 11 65 633.3691586956885 1264.723764458177 2 633.3688842654228 MULTI CID FTMS 0 0 0 14964 495503.03125 0.2462872761961946 8 -0.8873443603515625 4 Unmodified _LSLVKNGYIMK_ REV__ENST00000556400.5_1_14:58740675-58764756:-|nuORF 7.608950283845883 0.8392484121837455 4 [{I|L}V]TV 4 -1 10.662 0.0 0.0 0.84302 0.0 0.0 0.0 849.4335172260081 849.4335172260081 7.89762789135569 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 [{I|L}V]TV 0.84302 - 44 1 1.29 42201.0 1.0 10071 4895 14964 HBL1_DMSO_200M_050219_2,14968 HBL1_DMSO_200M_050219_2,14968,LSLVKNGYIMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14969 78.789 122.0 650330.0 25 0 117670.0 + 13671 HPYRLILTV 9 89 556.3347745225931 1110.654996111986 2 556.3348876833916 MULTI CID FTMS 0 0 0 14964 431606.59375 0.0453997715687958 -3 0.2764892578125 5 Unmodified _HPYRLILTV_ ENSG00000105397|ENST00000525621|TYK2 45.69961567697781 0.0497987121815769 4 V{I|L}[VP]H{I|L}TV 8 6 35.839 0.0 0.0 3.2268 0.0 0.0 234.1118488996109 0.0 234.1118488996109 0.0 6.188971147931824 0.0 0.0 0 1.0 0.0 0.0 0.0 V{I|L}[VP]H{I|L}TV 3.2268 - 131 1 1.29 67627.9 1.0 10072 4895 14964 HBL1_DMSO_200M_050219_2,14969 HBL1_DMSO_200M_050219_2,14969,HPYRLILTV True True HPYRLILTV 78.788967 556.334887683392 256614048.0 14964.0 ENSG00000105397|ENST00000525621|TYK2 4.731136480967204 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14970 78.791 97.0 691040.0 25 0 131570.0 + 41992 VQPDGLITI 9 95 478.2765449638088 954.5385369944177 2 478.2774536013603 MULTI CID FTMS 0 0 0 14964 436063.40625 0.478517378333763 -2 0.2227859497070312 6 Unmodified _VQPDGLITI_ REV__ENST00000590311.5_1_17:67109638-67111556:-|nuORF 29.081581746732265 0.1611639662936252 4 Q{I|L}VT{I|L}{I|L} 6 -1 44.686 0.0 0.0 4.6814 0.0 0.0 269.10103041816564 0.0 269.10103041816564 0.0 34.50449887549382 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 Q{I|L}VT{I|L}{I|L} 4.6814 - 221 1 1.29 55939.4 1.0 10073 4895 14964 HBL1_DMSO_200M_050219_2,14970 HBL1_DMSO_200M_050219_2,14970,VQPDGLITI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14971 78.796 235.0 506580.0 25 0 21803.0 -1 0 110 974.9627004435516 1947.910847953904 2 975.4646484255792 MULTI CID FTMS 0 0 0 14964 337539.375 0.461938485182742 -4 0.3584747314453125 7 4 {[QV]|[N{I|L}]|[RA]|[KV]}T[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[RK]DAN{I|L} 12 -1 54.556 0.0 0.0 2.8008 0.0 0.0 0.0 469.1474944929152 469.1474944929152 34.85892340822657 0.0 0.0 0.0 0 0.785666875892183 0.744727494896694 0.6421590589602533 1.0189301784845295 {[QV]|[N{I|L}]|[RA]|[KV]}T[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[RK]DAN{I|L} 2.8008 - 7430 1 1.29 81987.2 1.0 10074 4895 14964 HBL1_DMSO_200M_050219_2,14971 HBL1_DMSO_200M_050219_2,14971, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14972 78.798 147.0 640230.0 25 0 49534.0 8550 ETILKTRSLD 10 111 588.3354738480257 1174.6563947628513 2 588.3363525271416 MULTI CID FTMS 0 0 0 14964 309818.375 0.8339611756964062 2 -0.18035888671875 8 Unmodified _ETILKTRSLD_ ENSG00000130558|ENST00000371793|OLFM1;nc|ENSG00000130558|Q99784-3|OLFM1;nc|ENSG00000130558|Q99784-5|OLFM1 14.838274106304384 0.5985701837916485 4 YSC[WK]{I|L}[DP] 8 8 21.151 0.0 0.0 1.8007 0.0 0.0 164.19473812398252 0.0 164.19473812398252 0.0 7.172072159049279 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 YSC[WK]{I|L}[DP] 1.8007 - 301 + 1 1.29 72419.7 1.0 10075 4895 14964 HBL1_DMSO_200M_050219_2,14972 HBL1_DMSO_200M_050219_2,14972,ETILKTRSLD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14973 78.801 126.0 415950.0 25 0 48675.0 -1 QVMTEDKGV 9 93 511.7434588186719 1021.4723647041438 2 511.7437011599541 MULTI CID FTMS 0 0 0 14964 261345.484375 0.4457011627377754 2 -0.18035888671875 9 Oxidation (M) _QVM(Oxidation (M))TEDKGV_ ENSG00000169228|ENST00000303251|RAB24;ENST00000471466.5_1_5:176728746-176728995:-|nuORF 8.593279151180031 0.6146971463335029 4 {I|L} 1 -1 14.604 0.0 0.0 1.4297 0.0 0.0 890.3773920252361 0.0 890.3773920252361 0.0 -0.0785631374726154 -0.0785631374726154 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4297 - 84 + 1 1.29 46411.7 1.0 10076 4895 14964 HBL1_DMSO_200M_050219_2,14973 HBL1_DMSO_200M_050219_2,14973,QVMTEDKGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14974 78.804 151.0 606530.0 25 0 71654.0 + 12658 GVLGPIINKV 10 132 505.323938609828 1008.633324286456 2 505.3242980837822 MULTI CID FTMS 0 0 0 14964 197461.890625 0.2783451206462518 -4 0.3584747314453125 10 Unmodified _GVLGPIINKV_ ENSG00000105808|ENST00000262940|RASA4;ENSG00000170667|ENST00000465829|RASA4B;ENST00000523568.1_7:102228019-102246337:-|nuORF;nc|ENSG00000105808|O43374-2|RASA4 34.40172386719151 0.2166836008404837 4 [VG]{I|L}GP{I|L}{I|L}NKV 10 0 + 66.65 0.0 0.0 6.6079 6.6079 87.201 0.0 0.0 0.0 39.81746022493704 5.484550065040281 5.484550065040281 9.164539485499256 0 1.055462187404089 1.6989700043360187 0.0 0.0 + + [VG]{I|L}GP{I|L}{I|L}NKV;[VG]{I|L}GP{I|L}{I|L}GGKV;[VG]{I|L}GP{I|L}[KQ]VV 6.6079;5.6993;4.5926 +;-;- + 760 + 1 1.29 71872.3 1.0 10077 4895 14964 HBL1_DMSO_200M_050219_2,14974 HBL1_DMSO_200M_050219_2,14974,GVLGPIINKV False True GVLGPIINKV 78.804051 505.324298083782 21986696.0 14964.0 ENSG00000105808|ENST00000262940|RASA4;;nc|ENSG00000105808|O43374-2|RASA4;;ENST00000523568.1_7:102228019-102246337:-|nuORF;;ENSG00000170667|ENST00000465829|RASA4B 6.824367046356201 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14975 78.818 800.0 349150.0 25 0 27866.0 + 3599 DAANVMVYV 9 156 981.4697028557551 980.4624263891552 1 982.476611316204 MULTI CID FTMS 0 0 0 14964 195326.78125 0.304580546746918 -3 0.2764892578125 11 Unmodified _DAANVMVYV_ ENSG00000115548|ENST00000312912|KDM3A;ENST00000441719.5_1_2:86711112-86716803:+|nuORF 21.53697664764585 0.2571576504437394 4 [YV]ADM{I|L}{I|L}S 8 7 31.423 0.0 0.0 3.2049 0.0 0.0 0.0 85.0023183171426 85.0023183171426 9.139670128121548 0.0 0.0 0.0 0 0.1822333069283654 0.8239087409443188 0.6747425010840047 0.0 [YV]ADM{I|L}{I|L}S 3.2049 - 4149 1 1.29 179404.2 0.8500000238418579 10078 4895 14964 HBL1_DMSO_200M_050219_2,14975 HBL1_DMSO_200M_050219_2,14975,DAANVMVYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14976 78.821 160.0 445560.0 25 0 53172.0 + 12590 GVIGKFIYA 9 114 484.28337802020826 966.5522031072164 2 484.2842590212822 MULTI CID FTMS 0 0 0 14964 168494.53125 1.0 0 0.0 12 Unmodified _GVIGKFIYA_ ENSG00000174010|ENST00000328046|KLHL15 21.74664581756881 0.2544899275067181 4 R{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L} 6 6 29.684 0.0 0.0 3.0712 0.0 0.0 252.10678181991028 0.0 252.10678181991028 0.0 17.210084362531575 0.0 0.0 0 0.4247425010840047 0.0 0.6307196863200843 0.0 R{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L} 3.0712 - 624 + 1 1.29 57697.9 1.0 10079 4895 14964 HBL1_DMSO_200M_050219_2,14976 HBL1_DMSO_200M_050219_2,14976,GVIGKFIYA False True GVIGKFIYA 78.821063 484.284259021282 1402460.125 14964.0 ENSG00000174010|ENST00000328046|KLHL15 -0.2857989271481831 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14977 78.829 439.0 241080.0 25 0 33375.0 + 19462 LFFIGVVG 8 125 426.2558661087086 850.4971792842172 2 426.2556030154228 MULTI CID FTMS 0 0 0 14964 173972.84375 1.0 0 0.0 13 Unmodified _LFFIGVVG_ REV__ENSG00000104691|ENST00000265616|UBXN8;REV__nc|ENSG00000104691|O00124-2|UBXN8;REV__nc|ENSG00000104691|O00124-3|UBXN8;REV__nc|ENSG00000104691|O00124|UBXN8 11.114462752807354 0.7467182956244686 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PSK{M(Oxidation (M))|F} 7 -1 + 27.628 0.0 0.0 3.2484 3.2484 76.771 0.0 0.0 0.0 10.296438576769871 5.818875814749809 5.818875814749809 9.999256878663443 0 0.4247425010840047 0.0 0.25 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PSK{M(Oxidation (M))|F};[KS][YV]{I|L}{[QN]|[E{I|L}]|[KN]};[PS][VP]P{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{M(Oxidation (M))|F}[QA]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[KS]M{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{M(Oxidation (M))|F}{[NV]|[RG]}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[KS]P{M(Oxidation (M))|F};[YV][KS]{I|L}{[QN]|[E{I|L}]|[KN]} 3.2484;2.0728;1.6297;1.578;1.3554;1.3172;1.2953;1.1275 -;-;-;-;-;-;-;- 154 + 1 1.29 86480.7 1.0 10080 4895 14964 HBL1_DMSO_200M_050219_2,14977 HBL1_DMSO_200M_050219_2,14977,LFFIGVVG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14978 78.843 800.0 136620.0 25 0 13421.0 -1 0 107 759.6788829431006 2276.0148194295016 3 760.0164672732353 MULTI CID FTMS 0 0 0 14964 156058.84375 0.7548242660979606 -2 0.2227859497070312 14 4 YMDASY 6 -1 42.211 0.0 0.0 1.8546 0.0 0.0 320.1509874315093 1222.576128423658 1542.7271158551673 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 YMDASY 1.8546 - 173 + 1 1.29 99596.4 0.8299999833106995 10081 4895 14964 HBL1_DMSO_200M_050219_2,14978 HBL1_DMSO_200M_050219_2,14978, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14979 78.85 318.0 329740.0 25 0 34457.0 38910 TVLFFVGL 8 145 448.2688894384936 894.5232259437871 2 449.2737914919853 MULTI CID FTMS 0 0 0 14964 124096.203125 0.5992405142562023 -7 0.7242507934570312 15 Unmodified _TVLFFVGL_ ENSG00000169313|ENST00000302632|P2RY12 28.17323086031832 0.4514957916281387 4 {[TV]|[{I|L}S]}{I|L}Q{I|L} 5 4 25.601 0.0 0.0 2.862 0.0 0.0 0.0 337.1577833991184 337.1577833991184 3.9974899660244816 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.8945990182825423 0.0 {[TV]|[{I|L}S]}{I|L}Q{I|L} 2.862 - 270 1 1.29 85615.6 1.0 10082 4895 14964 HBL1_DMSO_200M_050219_2,14979 HBL1_DMSO_200M_050219_2,14979,TVLFFVGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14980 78.858 471.0 109330.0 25 0 13836.0 -1 0 82 740.6553576381824 2218.944243514747 3 740.9904052615166 MULTI CID FTMS 0 0 0 14964 119313.6484375 0.8922090198005168 1 -0.129058837890625 16 4 G{M(Oxidation (M))|F} 2 -1 19.464 0.0 0.0 0.87717 0.0 0.0 1996.843365684472 0.0 1996.843365684472 0.0 1.6228623922687966 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 0.87717 - 279 + 1 1.29 54440.4 1.0 10083 4895 14964 HBL1_DMSO_200M_050219_2,14980 HBL1_DMSO_200M_050219_2,14980, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 14981 78.872 800.0 154730.0 25 0 22664.0 + -1 RFRLVIHICL 10 173 663.8958604693329 0 663.8958618044853 PEAK CID FTMS 0 0 0 14964 118870.6015625 0.3129845721859309 -7 0.7242507934570312 17 Carbamidomethyl (C) _RFRLVIHIC(Carbamidomethyl (C))L_ REV__ENSG00000223501|ENST00000445902|VPS52;REV__ENST00000493379.1_1_6:33232539-33235000:-|nuORF;REV__nc|ENSG00000223501|Q8N1B4-2|VPS52 1.844237919475145 0.3961065659209837 4 N 1 -1 4.732 0.0 0.0 0.35692 0.0 0.0 1076.665424071758 132.04580103092033 1208.7112251026783 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0752574989159953 N 0.35692 - 25 + 1 1.29 101731.4 0.6200000047683716 10084 4895 14964 HBL1_DMSO_200M_050219_2,14981 HBL1_DMSO_200M_050219_2,14981,RFRLVIHICL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14982 78.886 800.0 131690.0 25 0 7275.8 + 19285 LEKRALRERA 10 162 621.3746762640876 1240.7347995949751 2 621.3752319216728 MULTI CID FTMS 0 0 0 14964 111359.828125 0.8948530027551115 4 -0.3865509033203125 18 Unmodified _LEKRALRERA_ REV__ENST00000378062.5_1_X:43808665-43809031:-|nuORF 5.296884461304476 0.7021353017287152 4 {[QN]|[E{I|L}]|[KN]}K 3 -1 11.963 0.0 0.0 0.96416 0.0 0.0 0.0 867.4912137397595 867.4912137397595 0.9936247538460936 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}K 0.96416 + + 460 1 1.29 78852.8 0.6200000047683716 10085 4895 14964 HBL1_DMSO_200M_050219_2,14982 HBL1_DMSO_200M_050219_2,14982,LEKRALRERA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14983 78.892 273.0 390950.0 25 0 52141.0 + 25047 MPTPLVPSV 9 113 470.7621253297131 939.5096977262262 2 470.7622253298759 MULTI CID FTMS 0 0 0 14964 114962.6796875 0.5124063484077758 -3 0.2764892578125 19 Unmodified _MPTPLVPSV_ ENSG00000198399|ENST00000355123|ITSN2;nc|ENSG00000198399|Q9NZM3-2|ITSN2;nc|ENSG00000198399|Q9NZM3-3|ITSN2;nc|ENSG00000198399|Q9NZM3-4|ITSN2 42.09456458481378 0.0639583784996157 4 [{I|L}P][TP]VM 6 5 26.176 0.0 0.0 2.7861 0.0 0.0 0.0 298.1390671932763 298.1390671932763 6.183947707303613 0.0 0.0 0.0 0 0.5 1.154901959985743 0.6237125054200234 0.0 [{I|L}P][TP]VM 2.7861 - 323 1 1.29 85685.1 1.0 10086 4895 14964 HBL1_DMSO_200M_050219_2,14983 HBL1_DMSO_200M_050219_2,14983,MPTPLVPSV True True MPTPLVPSV 78.891859 470.762225329876 4700576.0 14964.0 ENSG00000198399|ENST00000355123|ITSN2;;nc|ENSG00000198399|Q9NZM3-4|ITSN2;;nc|ENSG00000198399|Q9NZM3-3|ITSN2;;nc|ENSG00000198399|Q9NZM3-2|ITSN2 5.729867617289226 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14984 78.906 800.0 166010.0 25 0 6500.8 + -1 YWPTYTPMEV 10 176 651.7893357838092 1301.5641186344185 2 651.7894164919853 MULTI CID FTMS 0 0 0 14964 94424.21875 1.0 0 0.0 20 Oxidation (M) _YWPTYTPM(Oxidation (M))EV_ nc|ENSG00000139842|Q13619-2|CUL4A;ENSG00000139842|ENST00000375440|CUL4A 37.97399986684836 0.1789611706409123 4 [WY][{M(Oxidation (M))|F}V]DTP{M(Oxidation (M))|F}EV 10 -1 + 49.241 0.0 0.0 3.7832 3.7832 47.989 0.0 0.0 0.0 13.300960184033585 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.2931576817365436 0.0 [WY][{M(Oxidation (M))|F}V]DTP{M(Oxidation (M))|F}EV;[WY][{M(Oxidation (M))|F}V]DTP{M(Oxidation (M))|F}D{I|L};[WY][{M(Oxidation (M))|F}V]DTE{M(Oxidation (M))|F}PV;[WY][{M(Oxidation (M))|F}V]DTE{[QS]|[NT]}Q;[WY][{M(Oxidation (M))|F}V]DET{M(Oxidation (M))|F}PV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{M(Oxidation (M))|F}TDEV[WY];[WY][{M(Oxidation (M))|F}V]DE{[ES]|[DT]|[{I|L}C]}EV;[WY][{M(Oxidation (M))|F}V]DE{[ES]|[DT]|[{I|L}C]}D{I|L};[WY][{M(Oxidation (M))|F}V]DET{[QS]|[NT]}Q;[WY][{M(Oxidation (M))|F}V]DTE[VP]{M(Oxidation (M))|F} 3.7832;3.7832;3.3824;3.0076;2.9776;2.9317;2.7061;2.7061;2.6029;2.5181 -;-;-;-;-;-;-;-;-;- 4617 + 1 1.29 102681.6 0.5400000214576721 10087 4895 14964 HBL1_DMSO_200M_050219_2,14984 HBL1_DMSO_200M_050219_2,14984,YWPTYTPMEV False False YWPTYTPMEV 78.905696 651.789416491985 1077490.875 14964.0 nc|ENSG00000139842|Q13619-2|CUL4A;;ENSG00000139842|ENST00000375440|CUL4A 6.9946699142456055 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14986 78.91 23.0 2345500.0 25 0 326540.0 + 12843 GVVDPRAISVL 11 59 563.3348653606411 1124.655177788082 2 563.3353149294853 MULTI CID FTMS 0 0 0 14985 2290852.0 1.0 0 0.0 1 Unmodified _GVVDPRAISVL_ ENSG00000244687|ENST00000371674|UBE2V1;ENST00000483534.5_1_20:48699307-48713022:-|nuORF;nc|ENSG00000244687|Q13404-1|UBE2V1;nc|ENSG00000244687|Q13404-2|UBE2V1;nc|ENSG00000244687|Q13404-6|UBE2V1;nc|ENSG00000244687|Q13404-7|UBE2V1 37.07464296494664 0.257459615863268 4 [{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDVGV{I|L} 11 8 + 69.506 0.0 0.0 6.1802 6.1802 73.707 0.0 0.0 0.0 7.70281599369082 30.5210202532668 7.70281599369082 0.5551732784983159 0 0.4247425010840047 1.0969100130080565 1.610924374808178 0.0 [{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDVGV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDRV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVRDV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SV[PS]SV{I|L};[RP][{I|L}A]SVDVGV{I|L};[{I|L}P][WK]VDVGV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDVR{I|L};[VG]V[KP]EERV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SV[VG]DV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}S[WP]SV{I|L} 6.1802;6.1308;5.5246;5.2451;5.2048;4.8793;4.8401;4.8032;4.7097;4.3219 -;-;-;-;-;-;-;-;-;- 322 1 1.299 49237.3 1.0 10088 4896 14985 HBL1_DMSO_200M_050219_2,14986 HBL1_DMSO_200M_050219_2,14986,GVVDPRAISVL False True GVVDPRAISVL 78.910367 563.335314929485 74686344.0 14985.0 nc|ENSG00000244687|Q13404-7|UBE2V1;;ENST00000483534.5_1_20:48699307-48713022:-|nuORF;;nc|ENSG00000244687|Q13404-2|UBE2V1;;nc|ENSG00000244687|Q13404-6|UBE2V1;;ENSG00000244687|ENST00000371674|UBE2V1;;nc|ENSG00000244687|Q13404-1|UBE2V1 7.665182908376058 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14987 78.912 50.0 1149500.0 25 0 175500.0 -1 IYIWCYSIC 9 94 407.5191507935497 1219.5356229808492 3 407.5194885134697 MULTI CID FTMS 0 0 0 14985 887818.625 0.5141565635568777 1 -0.051300048828125 2 Carbamidomethyl (C) _IYIWC(Carbamidomethyl (C))YSIC_ ENST00000379997.7_1_9:27561302-27561452:-|nuORF 5.731851221503515 0.7145881442174411 4 [Y{I|L}][WQ]Y 5 -1 22.944 0.0 0.0 1.8814 0.0 0.0 0.0 463.167780266274 463.167780266274 5.465426634781313 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [Y{I|L}][WQ]Y 1.8814 - 291 1 1.299 49777.4 1.0 10089 4896 14985 HBL1_DMSO_200M_050219_2,14987 HBL1_DMSO_200M_050219_2,14987,IYIWCYSIC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14988 78.913 13.0 4990500.0 25 0 907670.0 + 11157 GEKRKLLTS 9 71 516.313526781174 1030.612500629148 2 516.3145019412041 MULTI CID FTMS 0 0 0 14985 3478646.75 0.9579347126947018 -1 0.129058837890625 3 Unmodified _GEKRKLLTS_ REV__ENST00000286428.5_1_X:154448526-154455520:+|nuORF 2.059750862983233 0.8427793054688888 4 [NP]{I|L}DK 5 -1 17.447 0.0 0.0 1.6929 0.0 0.0 0.0 460.2888671665104 460.2888671665104 2.6481782300953665 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}DK 1.6929 - 36 1 1.299 57544.6 1.0 10090 4896 14985 HBL1_DMSO_200M_050219_2,14988 HBL1_DMSO_200M_050219_2,14988,GEKRKLLTS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 14989 78.914 29.0 2125800.0 25 0 311900.0 + 34969 SQLELGVHL 9 82 498.2798379139663 994.5451228947326 2 498.2799255251884 MULTI CID FTMS 0 0 0 14985 1675414.0 1.0 0 0.0 4 Unmodified _SQLELGVHL_ DLG5|p.R1690Sfs*26|1|0.31|ENSG00000151208|chr10:77805761-77805762|-/A|frameshift_variant;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;nc|ENSG00000151208|Q8TDM6-5|DLG5 39.957323273325 0.0756908302845263 4 {[QS]|[NT]}{I|L}G{I|L}EV[H{I|L}] 9 2 + 63.183 0.0 0.0 6.353 6.353 89.663 0.0 0.0 0.0 36.35029351276792 7.147642715192504 7.147642715192504 14.075221787320515 0 0.8807196863200843 1.0457574905606752 0.805462187404089 0.0 {[QS]|[NT]}{I|L}G{I|L}EV[H{I|L}];{[QS]|[NT]}VA{I|L}EV[H{I|L}] 6.353;4.9377 -;- 185 + 1 1.299 53002.0 1.0 10091 4896 14985 HBL1_DMSO_200M_050219_2,14989 HBL1_DMSO_200M_050219_2,14989,SQLELGVHL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14990 78.915 37.0 1724500.0 25 0 417390.0 17987 KRRKHQVP 8 62 524.827067147253 1047.639581361306 2 524.8276855349541 MULTI CID FTMS 0 0 0 14985 1592287.75 1.0 0 0.0 5 Unmodified _KRRKHQVP_ ENST00000272462.2_1_2:110873982-110874102:-|nuORF 0.7936320650641473 0.8195151834710337 4 V 1 7 10.596 0.0 0.0 1.0114 0.0 0.0 930.560416787867 0.0 930.560416787867 0.0 9.882594520752386 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.0114 + + 8 + 1 1.299 55467.9 1.0 10092 4896 14985 HBL1_DMSO_200M_050219_2,14990 HBL1_DMSO_200M_050219_2,14990,KRRKHQVP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 14991 78.916 43.0 1183000.0 25 0 147310.0 + 3366 AYPYYASAF 9 72 526.7394344491722 1051.4643159651444 2 526.7401611208916 MULTI CID FTMS 0 0 0 14985 1059877.875 0.7936669870717531 1 -0.051300048828125 6 Unmodified _AYPYYASAF_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 20.871210003555333 0.2717241269066626 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AYS 5 5 40.942 0.0 0.0 3.8938 0.0 0.0 0.0 467.1932337720381 467.1932337720381 14.62090003702584 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AYS 3.8938 - 203 1 1.299 46262.5 1.0 10093 4896 14985 HBL1_DMSO_200M_050219_2,14991 HBL1_DMSO_200M_050219_2,14991,AYPYYASAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14992 78.919 136.0 395180.0 25 0 97857.0 9778 FNISLLLFLVM 11 73 655.3824352675513 1308.7503176019025 2 655.3830444216728 MULTI CID FTMS 0 0 0 14985 691338.625 0.4458319172796808 -5 0.4875335693359375 7 Unmodified _FNISLLLFLVM_ SCN2A|p.G1664S|1|0.23|ENSG00000136531|chr2:165388796-165388796|G/A|missense_variant 1.3295316138638542 0.8688751186870782 4 P 1 11 0.088644 0.0 0.0 0.0067732 0.0 0.0 978.5823926524868 230.09432398013908 1208.676716632626 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.0067732 - 4 + 1 1.299 57497.4 1.0 10094 4896 14985 HBL1_DMSO_200M_050219_2,14992 HBL1_DMSO_200M_050219_2,14992,FNISLLLFLVM False False False False variant PXD020620_cell_line HBL1_DMSO_200M_050219_2 14993 78.921 99.0 681150.0 25 0 176440.0 + 45947 YYYDPTTGLYY 11 80 709.8107300331268 1417.6069071330537 2 709.8116943240166 MULTI CID FTMS 0 0 0 14985 607070.3125 0.5703803806237355 1 -0.051300048828125 8 Unmodified _YYYDPTTGLYY_ ENSG00000003756|ENST00000347869|RBM5;ENST00000489437.1_1_3:50144918-50148299:+|nuORF 29.081581746732265 0.4093582134107448 4 [TP]{[SA]|[TG]}{I|L}YDYYYY 11 8 + 38.772 0.0 0.0 2.7351 2.7351 65.954 0.0 0.0 0.0 1.249165798569976 5.100232283308344 1.249165798569976 2.9659780392387347 0 0.8182503180159344 0.0 0.6109243748081782 0.0 [TP]{[SA]|[TG]}{I|L}YDYYYY;[TP]{[SA]|[TG]}{I|L}YYDYYY;[TP]{[SA]|[TG]}{I|L}DYYYYY;[TP]{[SA]|[TG]}D{I|L}YYYYY;[TP]{[SA]|[TG]}{I|L}D[NP]DYYY;[TP]{[SA]|[TG]}D{I|L}[NP]DYYY 2.7351;2.5258;2.3104;1.6018;1.4572;0.74865 -;-;-;-;-;- 302 1 1.299 53695.5 1.0 10095 4896 14985 HBL1_DMSO_200M_050219_2,14993 HBL1_DMSO_200M_050219_2,14993,YYYDPTTGLYY False True YYYDPTTGLYY 78.921346 709.811694324017 18174770.0 14985.0 ENSG00000003756|ENST00000347869|RBM5;;ENST00000489437.1_1_3:50144918-50148299:+|nuORF 4.662105719248454 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14994 78.923 95.0 653080.0 25 0 45778.0 26942 PDYDPTIEDSY 11 91 657.7722646425308 1313.5299763518617 2 657.7729980349541 MULTI CID FTMS 0 0 0 14985 578763.0625 0.3119388427720887 2 -0.222808837890625 9 Unmodified _PDYDPTIEDSY_ ENSG00000158186|ENST00000423968|MRAS 13.042465956692816 0.7638483625850725 4 [PS]GV[HM]D 7 9 27.911 0.0 0.0 2.1249 0.0 0.0 0.0 587.1998899031038 587.1998899031038 -0.0480929008118344 0.0 -0.0480929008118344 0.0 0 0.8494850021680094 0.9208187539523752 0.3252574989159953 0.0 [PS]GV[HM]D 2.1249 - 359 1 1.299 52035.3 1.0 10096 4896 14985 HBL1_DMSO_200M_050219_2,14994 HBL1_DMSO_200M_050219_2,14994,PDYDPTIEDSY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14995 78.925 46.0 1119900.0 25 0 142230.0 + 29314 QILDGVHYL 9 96 529.2880157366308 1056.5614785400614 2 529.2859374880791 MULTI CID FTMS 0 0 0 14985 454197.0625 1.0 0 0.0 10 Unmodified _QILDGVHYL_ ENSG00000167657|ENST00000545797|DAPK3;nc|ENSG00000167657|O43293-2|DAPK3 38.15118350030904 0.0856056900103839 4 [Q{I|L}]{I|L}DRHY{I|L} 8 2 + 60.654 0.0 0.0 5.7407 5.7407 85.432 0.0 0.0 0.0 38.97176992505884 12.184290373512034 12.184290373512034 9.262137858390815 0 0.2742275032520141 2.0 0.4247425010840047 0.0 [Q{I|L}]{I|L}DRHY{I|L};[Q{I|L}]{I|L}D[VG]HY{I|L};[Q{I|L}]{I|L}DR[WQ]V;[Q{I|L}]{I|L}D[KS][PA]SV;[Q{I|L}]{I|L}D[VG][WQ]V;MAG{I|L}PRHY{I|L};MK{I|L}PRHY{I|L};MAG{I|L}P[VG]HY{I|L};[Q{I|L}]A[QP]{M(Oxidation (M))|F}[PA]SV;MK{I|L}P[VG]HY{I|L} 5.7407;4.8641;4.4326;3.6043;3.5559;3.5536;3.392;2.682;2.659;2.5154 -;+;-;-;-;-;-;-;-;- + 516 + 1 1.299 43729.8 1.0 10097 4896 14985 HBL1_DMSO_200M_050219_2,14995 HBL1_DMSO_200M_050219_2,14995,QILDGVHYL True True QILDGVHYL 78.924679 529.2891 3516633.75 14985.0 nc|ENSG00000167657|O43293-2|DAPK3;;ENSG00000167657|ENST00000545797|DAPK3 4.704444249471028 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14996 78.926 78.0 995400.0 25 0 91526.0 + 10813 FYVDTVRAF 9 95 559.2873486696149 1116.5601444060296 2 559.2874633669853 MULTI CID FTMS 0 0 0 14985 457168.1875 0.729048004481916 -1 0.129058837890625 11 Unmodified _FYVDTVRAF_ ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133235217-133253139:-|nuORF 16.149105407346934 0.3995459350917656 4 {M(Oxidation (M))|F}YVDT[YK]D 8 4 55.75 0.0 0.0 4.9931 0.0 0.0 0.0 82.06690393619374 82.06690393619374 36.542294029923 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.2742275032520141 0.0 {M(Oxidation (M))|F}YVDT[YK]D 4.9931 - 159 + 1 1.299 66031.8 1.0 10098 4896 14985 HBL1_DMSO_200M_050219_2,14996 HBL1_DMSO_200M_050219_2,14996,FYVDTVRAF False True FYVDTVRAF 78.926477 559.287463366985 4551933.0 14985.0 ENSG00000177084|ENST00000320574|POLE;;ENST00000537064.5_1_12:133235217-133253139:-|nuORF 2.545110066731771 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14997 78.929 93.0 537340.0 25 0 41567.0 39862 VFIDKQTNL 9 74 539.3006855291252 1076.5868181250505 2 539.3009521365166 MULTI CID FTMS 0 0 0 14985 357231.53125 0.0737543756826116 -4 0.405548095703125 12 Unmodified _VFIDKQTNL_ ENSG00000048740|ENST00000633077|CELF2;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-4|CELF1;nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1 22.736283301280096 0.2418982879461534 4 V{M(Oxidation (M))|F}VD 4 6 45.772 0.0 0.0 4.2516 0.0 0.0 0.0 613.3299654596311 613.3299654596311 16.843798115897606 0.0 0.0 0.0 0 0.4247425010840047 0.958607314841775 0.0 0.0 V{M(Oxidation (M))|F}VD 4.2516 - 109 + 1 1.299 46290.2 1.0 10099 4896 14985 HBL1_DMSO_200M_050219_2,14997 HBL1_DMSO_200M_050219_2,14997,VFIDKQTNL False True VFVDRTLDL 78.928531 539.300952136517 39690796.0 14985.0 ENSG00000184178|ENST00000401642|SCFD2;;nc|ENSG00000184178|Q8WU76-2|SCFD2 4.657631556193034 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14998 78.931 115.0 675650.0 25 0 86993.0 + 10242 FQPYPLPHV 9 89 549.2937367436119 1096.5729205540238 2 549.2933837771416 MULTI CID FTMS 0 0 0 14985 340871.5625 0.9711775147523334 -1 0.129058837890625 13 Unmodified _FQPYPLPHV_ ENSG00000179335|ENST00000395066|CLK3;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;ENST00000569406.5_1_15:74914809-74922221:+|nuORF;nc|ENSG00000179335|P49761-3|CLK3 26.34127834903884 0.1960301806784604 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PY[{I|L}P]V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 9 2 + 40.467 0.0 0.0 3.6903 3.6903 71.882 0.0 0.0 0.0 5.061476408534446 5.061476408534446 5.061476408534446 5.061476408534446 0 0.5 0.8239087409443188 1.0114393726401687 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PY[{I|L}P]V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[{I|L}T]H[{I|L}P]YP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PY[{I|L}P]PHV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PY[{I|L}P]HPV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}Y[{I|L}P]V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}Y[{I|L}P]PHV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}Y[{I|L}P]HPV 3.6903;3.2287;2.9975;2.723;2.2084;1.5157;1.2412 -;-;+;-;-;-;- + 200 + 1 1.299 67910.9 1.0 10100 4896 14985 HBL1_DMSO_200M_050219_2,14998 HBL1_DMSO_200M_050219_2,14998,FQPYPLPHV False True FQPYPLPHV 78.930937 549.293383777142 5907349.5 14985.0 ENSG00000179335|ENST00000395066|CLK3;;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;;nc|ENSG00000179335|P49761-3|CLK3;;ENST00000569406.5_1_15:74914809-74922221:+|nuORF 7.791019916534424 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 14999 78.934 141.0 561140.0 25 0 64000.0 + 13584 HPLPFPSL 8 96 454.2556842461309 906.4968155590618 2 454.2562438845634 MULTI CID FTMS 0 0 0 14985 304158.84375 0.8649934715012276 -1 0.129058837890625 14 Unmodified _HPLPFPSL_ ENST00000396359.1_1_8:82193222-82195661:+|nuORF 36.46614268402704 0.2934124525509074 4 [{I|L}P]S{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5 5 31.655 0.0 0.0 3.4921 0.0 0.0 0.0 312.1565867714323 312.1565867714323 13.397803053245948 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [{I|L}P]S{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3.4921 - 228 1 1.299 66124.9 1.0 10101 4896 14985 HBL1_DMSO_200M_050219_2,14999 HBL1_DMSO_200M_050219_2,14999,HPLPFPSL False True HPLPFPSL 78.933764 454.256243884563 3307023.25 14985.0 ENST00000396359.1_1_8:82193222-82195661:+|nuORF 6.34054168065389 2.0 True 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15000 78.937 159.0 481530.0 25 0 48943.0 + 36131 SVTDLAFKV 9 120 490.2758526936171 978.5371524540342 2 490.7775146365166 MULTI CID FTMS 0 0 0 14985 323189.40625 0.4645069302839485 2 -0.222808837890625 15 Unmodified _SVTDLAFKV_ ENSG00000061273|ENST00000080059|HDAC7;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7 27.628801355627647 0.1796483985696185 4 [VS]T{[VA]|[{I|L}G]}V{I|L}[YQ] 9 5 + 37.398 0.0 0.0 3.8219 3.8219 71.545 0.0 0.0 0.0 15.57582781025922 3.2121122500096604 3.2121122500096604 4.539974558725255 0 0.3807196863200844 2.0 0.0 0.0 [VS]T{[VA]|[{I|L}G]}V{I|L}[YQ];[VS]T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WKV;[VS]T{[VA]|[{I|L}G]}VAAYV;[VS]T[R{I|L}]{I|L}[YQ];[VS]T{[VA]|[{I|L}G]}V[YQ]{I|L};[VS]T[W{I|L}]{M(Oxidation (M))|F}KV;[VS]T{[VA]|[{I|L}G]}[Q{I|L}]YV;[VS]T[R{I|L}]AAYV;[VS]T[R{I|L}][YQ]{I|L};[VS]T{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.8219;3.3579;3.2875;3.1598;2.9582;2.9512;2.62;2.62;2.2962;2.2133 -;-;-;-;-;-;-;-;-;- 541 + 1 1.299 62119.3 1.0 10102 4896 14985 HBL1_DMSO_200M_050219_2,15000 HBL1_DMSO_200M_050219_2,15000,SVTDLAFKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15001 78.94 138.0 601590.0 25 0 50318.0 + 20416 LLIDDKGTIKL 11 90 614.8772994483505 1227.740045963501 2 614.8793212771416 MULTI CID FTMS 0 0 0 14985 284279.5 1.0 0 0.0 16 Unmodified _LLIDDKGTIKL_ ENSG00000170312|ENST00000395284|CDK1 55.24861242081279 0.0885632729458983 4 {I|L}{I|L}{I|L}DDK{[SA]|[TG]}{I|L}K{I|L} 11 0 + 76.673 0.0 0.0 6.2451 6.2451 74.951 0.0 0.0 0.0 36.57577319177795 1.1394335230683763 1.1394335230683763 1.1394335230683763 0 1.2302046884880935 2.0 0.805462187404089 0.2396518287104437 + + {I|L}{I|L}{I|L}DDK{[SA]|[TG]}{I|L}K{I|L};{I|L}{I|L}{I|L}DDK{[SA]|[TG]}{I|L}{I|L}K;{I|L}{I|L}{I|L}HHE{I|L}{I|L}K{I|L};{I|L}{I|L}{I|L}HHE{I|L}{I|L}{I|L}K;{I|L}{I|L}{I|L}[{M(Oxidation (M))|F}V]{I|L}E{I|L}VG{I|L};{I|L}{I|L}{I|L}[YE][VP]{I|L}VG{I|L} 6.2451;6.1523;5.7287;5.6359;4.4315;3.5381 +;-;-;-;-;- + 370 + 1 1.299 67708.8 1.0 10103 4896 14985 HBL1_DMSO_200M_050219_2,15001 HBL1_DMSO_200M_050219_2,15001,LLIDDKGTIKL True True LLIDDKGTIKL 78.9397 614.879321277142 2494896.0 14985.0 ENSG00000170312|ENST00000395284|CDK1 4.820970853169759 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15002 78.943 195.0 169980.0 25 0 11939.0 45888 YYRRPLQVL 9 70 604.3486961834969 1206.6828394337938 2 604.3489257693291 MULTI CID FTMS 0 0 0 14985 255491.1875 0.5528318496764815 4 -0.4327011108398437 17 Unmodified _YYRRPLQVL_ ENSG00000101441|ENST00000217423|CST4 2.302733041254933 0.8342969208511092 4 {I|L} 1 8 9.7539 0.0 0.0 0.80832 0.0 0.0 1075.5877599433625 0.0 1075.5877599433625 0.0 1.7951097132083405 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.80832 + + 33 + 1 1.299 30661.4 1.0 10104 4896 14985 HBL1_DMSO_200M_050219_2,15002 HBL1_DMSO_200M_050219_2,15002,YYRRPLQVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15003 78.946 133.0 580460.0 25 0 86231.0 + 34120 SLLQWTLL 8 116 487.2902572083949 972.5659614835896 2 487.2876159548759 MULTI CID FTMS 0 0 0 14985 251060.34375 0.2289740767426006 -5 0.4875335693359375 18 Unmodified _SLLQWTLL_ REV__ENST00000583204.5_1_17:30348129-30360999:+|nuORF;REV__nc|ENSG00000185158|Q96QE4-2|LRRC37B;REV__nc|ENSG00000185158|Q96QE4|LRRC37B 20.453626601364224 0.6087503291685402 4 {[TV]|[{I|L}S]}VGE{I|L}RS{I|L} 9 -1 + 66.19 0.0 0.0 6.8057 6.8057 77.107 0.0 0.0 0.0 27.147642715192497 1.1394335230683623 1.1394335230683623 1.1394335230683623 0 0.4247425010840047 2.0 0.4247425010840047 0.3494850021680094 {[TV]|[{I|L}S]}VGE{I|L}RS{I|L};{[TV]|[{I|L}S]}VGE{I|L}RTV;{[TV]|[{I|L}S]}VW{I|L}RS{I|L};{[TV]|[{I|L}S]}RE{I|L}RS{I|L};{[TV]|[{I|L}S]}VW{I|L}RTV;{[TV]|[{I|L}S]}RE{I|L}RTV;{[TV]|[{I|L}S]}V{I|L}{[DA]|[EG]}RS{I|L};{[TV]|[{I|L}S]}V{I|L}{[DA]|[EG]}RTV;{[TV]|[{I|L}S]}{I|L}V{[DA]|[EG]}RS{I|L};{[TV]|[{I|L}S]}{I|L}V{[DA]|[EG]}RTV 6.8057;6.6886;6.1396;6.1396;6.0225;6.0225;5.5466;5.4295;5.4154;5.2982 -;-;-;-;-;-;-;-;-;- 198 + 1 1.299 63970.0 1.0 10105 4896 14985 HBL1_DMSO_200M_050219_2,15003 HBL1_DMSO_200M_050219_2,15003,SLLQWTLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15004 78.953 390.0 477750.0 25 0 65739.0 + 27873 PLRVPIGL 8 133 432.7867275479063 863.5589021626125 2 432.7869750857353 MULTI CID FTMS 0 0 0 14985 222631.609375 0.4905596241890496 9 -0.9526443481445312 19 Unmodified _PLRVPIGL_ REV__ENST00000341735.3_1_15:90319632-90321465:+|nuORF 26.34127834903884 0.4900704351052977 4 {I|L}P{I|L} 3 -1 44.922 0.0 0.0 5.2019 0.0 0.0 0.0 537.3143404596311 537.3143404596311 30.31743128760553 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 {I|L}P{I|L} 5.2019 - 101 + 1 1.299 146120.6 1.0 10106 4896 14985 HBL1_DMSO_200M_050219_2,15004 HBL1_DMSO_200M_050219_2,15004,PLRVPIGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15005 78.957 207.0 368880.0 25 0 50776.0 + 15237 IPFSSKLNI 9 122 509.8013031582373 1017.5880533832748 2 509.8018371462822 MULTI CID FTMS 0 0 0 14985 212023.203125 0.6081345497442018 -2 0.2058868408203125 20 Unmodified _IPFSSKLNI_ nc|ENSG00000134884|Q9NWB6-2|ARGLU1;nc|ENSG00000134884|Q9NWB6-3|ARGLU1 26.268140514670165 0.1969607489560049 4 {I|L}{I|L}M 3 7 49.085 0.0 0.0 4.8237 0.0 0.0 0.0 657.357147595262 657.357147595262 35.10574239612792 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {I|L}{I|L}M 4.8237 - 330 + 1 1.299 70807.9 1.0 10107 4896 14985 HBL1_DMSO_200M_050219_2,15005 HBL1_DMSO_200M_050219_2,15005,IPFSSKLNI False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 15007 78.962 65.0 1092700.0 25 0 102460.0 + 24861 MPMMPGPPM 9 114 494.7091136373756 987.4036743415512 2 494.7101013064384 MULTI CID FTMS 0 0 0 15006 254347.484375 0.4410050964897832 -3 0.2571868896484375 1 Unmodified _MPMMPGPPM_ ENSG00000124562|ENST00000244520|SNRPC 36.46614268402704 0.0948557732959553 4 {NN|[MP]|[D{I|L}]|[EV]}M[PG]MPPM 9 2 {NN|[MP]|[D{I|L}]|[EV]}M[PG]M + + 29.693 0.12334 0.019144 3.0072 3.0072 45.925 0.0 0.0 0.0 0.0 15.078474942632592 0.0 0.0 0 0.5 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}M[PG]MPPM 3.0072 - 402 + 1 1.299 59260.9 1.0 10108 4897 15006 HBL1_DMSO_200M_050219_2,15007 HBL1_DMSO_200M_050219_2,15007,MPMMPGPPM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15008 78.967 311.0 69811.0 25 0 2851.3 -1 0 51 1101.9760280907835 2201.937503248367 2 1102.477587878704 MULTI CID FTMS 0 0 0 15006 164598.6875 0.9591138760148968 1 -0.1715087890625 2 4 {I|L}VT{M(Oxidation (M))|F}V{M(Oxidation (M))|F} 6 -1 26.833 0.0 0.0 1.2186 0.0 0.0 1477.5619902052665 0.0 1477.5619902052665 0.0 3.4678748622465605 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VT{M(Oxidation (M))|F}V{M(Oxidation (M))|F} 1.2186 - 241 + 1 1.299 21881.0 1.0 10109 4897 15006 HBL1_DMSO_200M_050219_2,15008 HBL1_DMSO_200M_050219_2,15008, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15009 78.973 281.0 453280.0 25 0 51778.0 + 29553 QLPLGQTL 8 149 435.2584891262553 868.5024253193106 2 435.2572509646416 MULTI CID FTMS 0 0 0 15006 237460.046875 0.3039466472684078 -2 0.18035888671875 3 Unmodified _QLPLGQTL_ REV__ENST00000578730.1_1_4:1243686-1243881:+|nuORF 19.438996006549623 0.6237395211498085 4 {I|L} 1 -1 12.218 0.0 0.0 1.4068 0.0 0.0 737.4072542761451 0.0 737.4072542761451 0.0 1.3721842261166692 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4068 + + 84 + 1 1.299 105377.8 1.0 10110 4897 15006 HBL1_DMSO_200M_050219_2,15009 HBL1_DMSO_200M_050219_2,15009,QLPLGQTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15010 78.976 171.0 365980.0 25 0 18573.0 + + -1 FIMEGTLTRV 10 81 583.3077639461715 1164.6009749591428 2 583.8123657107353 MULTI CID FTMS 0 0 0 15006 196571.375 0.3371834478168652 -2 0.18035888671875 4 Carbamidomethyl (C) _LFGSLWAC(Carbamidomethyl (C))LV_ ENSG00000115904|ENST00000402219|SOS1 10.823927491677226 0.6659270209832991 4 {[DA]|[EG]}MRR{I|L}{M(Oxidation (M))|F}TR 9 -1 + 23.016 0.0 0.0 1.9763 1.9763 66.112 0.0 0.0 0.0 5.976818486582125 6.852642631639306 5.976818486582125 3.226825097560422 0 0.6237125054200234 1.3979400086720375 0.0 0.0 {[DA]|[EG]}MRR{I|L}{M(Oxidation (M))|F}TR;{[DA]|[EG]}MRR{I|L}Y[Q{I|L}];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}[QP]{[WT]|[RM]}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y{I|L}[QP]{[WT]|[RM]}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GRR{I|L}{M(Oxidation (M))|F}TR;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DE[K{I|L}]{[WT]|[RM]}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ME[K{I|L}]{[WT]|[RM]}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}[QP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y{I|L}[QP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GRR{I|L}Y[Q{I|L}] 1.9763;1.6992;1.1511;1.1095;0.92714;0.89267;0.85106;0.70754;0.66593;0.65006 -;-;-;-;-;-;-;-;-;- 136 1 1.299 53506.2 1.0 10111 4897 15006 HBL1_DMSO_200M_050219_2,15010 HBL1_DMSO_200M_050219_2,15010,LFGSLWACLV False False FIMEGTLTRV 78.975893 583.812365710735 494237.375 15006.0 ENSG00000115904|ENST00000402219|SOS1 2.750524918238322 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15011 78.985 492.0 424140.0 25 0 62033.0 21713 LPLSPEELL 9 161 337.5310716004214 1009.5713854014642 3 337.5306579470634 MULTI CID FTMS 0 0 0 15006 179085.0 0.2645039332747343 -2 0.18035888671875 5 Unmodified _LPLSPEELL_ ENSG00000010292|ENST00000315579|NCAPD2 26.268140514670165 0.1969607489560049 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}RDH{I|L}{I|L} 8 5 + 42.477 0.0 0.0 4.2075 4.2075 68.358 0.0 0.0 0.0 1.933115814076345 14.904630595263413 1.933115814076345 1.933115814076345 0 0.5924778212679485 1.6989700043360187 0.3494850021680094 0.3494850021680094 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}RDH{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}RDH{I|L}{I|L};{I|L}P{M(Oxidation (M))|F}[HV]{[RE]|[WV]}{I|L};{I|L}{I|L}M[HV]{[RE]|[WV]}{I|L};{I|L}{I|L}[TA][RH]Q[TA];{I|L}{I|L}[TA][RH]N[VS] 4.2075;4.016;3.7562;2.5821;0.75654;0.33616 -;-;-;-;-;- 468 1 1.299 169057.6 1.0 10112 4897 15006 HBL1_DMSO_200M_050219_2,15011 HBL1_DMSO_200M_050219_2,15011,LPLSPEELL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15012 78.99 301.0 158010.0 25 0 12165.0 -1 0 81 650.3099435779893 1947.908001334168 3 650.3101074099541 MULTI CID FTMS 0 0 0 15006 177985.875 1.0 0 0.0 6 4 {[TV]|[{I|L}S]}Q 3 -1 20.509 0.0 0.0 1.0529 0.0 0.0 0.0 1616.7094289066863 1616.7094289066863 5.81671320698983 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.4690370897582285 0.2887254899964357 {[TV]|[{I|L}S]}Q 1.0529 - 79 1 1.299 49539.8 1.0 10113 4897 15006 HBL1_DMSO_200M_050219_2,15012 HBL1_DMSO_200M_050219_2,15012, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15013 79.004 800.0 295410.0 25 0 54848.0 + -1 EFCKECKPCQF 11 124 766.8192541970889 1531.6239554609776 2 766.8195678591728 MULTI CID FTMS 0 0 0 15006 136107.5 0.8554343218019146 -2 0.18035888671875 7 3 Carbamidomethyl (C) _EFC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))KPC(Carbamidomethyl (C))QF_ REV__ENSG00000198146|ENST00000356321|ZNF770 3.2813086475875832 0.8596665074481906 4 [C(Carbamidomethyl (C))C]YS 4 -1 17.479 0.0 0.0 1.1412 0.0 0.0 0.0 1015.448596726359 1015.448596726359 3.4999344677648736 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 [C(Carbamidomethyl (C))C]YS 1.1412 - 307 + 1 1.299 164788.5 0.7799999713897705 10114 4897 15006 HBL1_DMSO_200M_050219_2,15013 HBL1_DMSO_200M_050219_2,15013,EFCKECKPCQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15014 79.01 339.0 263140.0 25 0 29358.0 + 8180 TAFTLAHI 8 122 437.2572260113853 1308.749848634356 3 437.5916625857353 MULTI CID FTMS 0 0 0 15006 132589.734375 0.5363451866934076 -4 0.4031448364257812 8 Unmodified _EPRRQRLQRA_ ENSG00000138018|ENST00000260585|SELENOI;ENST00000260585.11_1_2:26569100-26611935:+|nuORF 3.5964929083625545 0.7100006075494749 4 E{I|L}[HQ]H{I|L} 6 7 16.955 0.0 0.0 1.2955 0.0 0.0 533.3595292016729 0.0 533.3595292016729 0.0 9.965394678904932 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}[HQ]H{I|L} 1.2955 - 219 + 1 1.299 83708.3 1.0 10115 4897 15006 HBL1_DMSO_200M_050219_2,15014 HBL1_DMSO_200M_050219_2,15014,EPRRQRLQRA False False TAFTLAHI 79.010066 437.2577 690513.0 15006.0 ENSG00000138018|ENST00000260585|SELENOI;;ENST00000260585.11_1_2:26569100-26611935:+|nuORF 3.734813372294108 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15015 79.015 295.0 160690.0 25 0 22164.0 + 14291 IEKKEKYFRL 10 95 451.9324689753993 1352.775577526398 3 451.9328185915947 MULTI CID FTMS 0 0 0 15006 130365.9375 0.6268777963142673 5 -0.567596435546875 9 Unmodified _IEKKEKYFRL_ REV__ENSG00000145721|ENST00000274382|LIX1 1.6526216038709556 0.7189921496796233 4 V 1 -1 14.604 0.0 0.0 1.0796 0.0 0.0 1235.6960314832322 0.0 1235.6960314832322 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0796 - 37 + 1 1.299 49520.9 1.0 10116 4897 15006 HBL1_DMSO_200M_050219_2,15015 HBL1_DMSO_200M_050219_2,15015,IEKKEKYFRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15016 79.022 367.0 349660.0 25 0 37404.0 -1 LSVCPEDESI 10 145 574.7589706427858 1147.5033883523715 2 574.7593261599541 MULTI CID FTMS 0 0 0 15006 119255.2734375 0.2561860557570738 43 -4.5976104736328125 10 Carbamidomethyl (C) _LSVC(Carbamidomethyl (C))PEDESI_ ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1 19.256988751693697 0.5244284437930726 4 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VP 6 -1 42.056 0.0 0.0 3.665 0.0 0.0 0.0 502.12177454166255 502.12177454166255 29.292243321524687 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}VP 3.665 - 301 + 1 1.299 103297.3 1.0 10117 4897 15006 HBL1_DMSO_200M_050219_2,15016 HBL1_DMSO_200M_050219_2,15016,LSVCPEDESI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15017 79.037 800.0 69122.0 25 0 17361.0 -1 0 43 1162.7937076028318 3485.3592934086955 3 1163.460009753704 MULTI CID FTMS 0 0 0 15006 107560.15625 0.6902926236654996 -6 0.5388336181640625 11 4 E 1 -1 6.9897 0.0 0.0 0.20054 0.0 0.0 2829.130791066702 524.1621798150999 3353.292970881802 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20054 - 5 + 1 1.299 53051.2 0.6399999856948853 10118 4897 15006 HBL1_DMSO_200M_050219_2,15017 HBL1_DMSO_200M_050219_2,15017, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15018 79.051 800.0 251480.0 25 0 37551.0 + 9891 FPFQPGSV 8 114 878.4421099402787 877.4348334736786 1 878.4408447146416 MULTI CID FTMS 0 0 0 15006 106212.984375 0.4125249945275874 -4 0.4031448364257812 12 Unmodified _FPFQPGSV_ ENSG00000100097|ENST00000215909|LGALS1;ENST00000425542.5_1_22:38072875-38075753:+|nuORF;ENST00000472321.1_1_22:38074415-38075753:+|nuORF 120.45040980043947 0.0090142352896633 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}PGSV 8 2 + 90.214 0.0 0.0 10.282 10.282 88.205 0.0 0.0 0.0 14.78347485907939 16.40978057358332 14.78347485907939 4.291746928241125 0 1.1237125054200234 1.6989700043360187 0.6237125054200234 0.7614393726401688 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}PGSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}QPGSV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{M(Oxidation (M))|F}PGSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[AG]{M(Oxidation (M))|F}PGSV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[AG]PGSV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}PPGSV;[VS]W{M(Oxidation (M))|F}PGSV;[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}PGSV;[AG]{M(Oxidation (M))|F}P{M(Oxidation (M))|F}PGSV;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}QPGSV 10.282;9.7925;8.5968;8.3582;8.303;7.3191;6.8801;6.6924;6.3303;6.2199 -;+;-;-;-;-;-;-;-;+ + 1698 1 1.299 137864.1 0.7799999713897705 10119 4897 15006 HBL1_DMSO_200M_050219_2,15018 HBL1_DMSO_200M_050219_2,15018,FPFQPGSV True True FPFQPGSV 79.050962 878.440844714642 3052407.25 15006.0 ENST00000472321.1_1_22:38074415-38075753:+|nuORF;;ENSG00000100097|ENST00000215909|LGALS1;;ENST00000425542.5_1_22:38072875-38075753:+|nuORF 8.052310943603516 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15019 79.065 800.0 130120.0 25 0 19967.0 + 9089 FFHHLKKQLLS 11 138 699.4081494644868 1396.8017459957734 2 699.4100829958916 MULTI CID FTMS 0 0 0 15006 107820.109375 0.321862512091148 -10 0.9575958251953124 13 Unmodified _FFHHLKKQLLS_ REV__ENSG00000148841|ENST00000337478|ITPRIP 3.2813086475875832 0.8596665074481906 4 S 1 -1 10.485 0.0 0.0 0.75061 0.0 0.0 810.527162110811 496.22019373111567 1306.7473558419267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 S 0.75061 + + 153 + 1 1.299 87181.4 0.7799999713897705 10120 4897 15006 HBL1_DMSO_200M_050219_2,15019 HBL1_DMSO_200M_050219_2,15019,FFHHLKKQLLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15020 79.078 701.0 159290.0 25 0 19619.0 21168 LPAYPASL 8 173 416.2337945049651 830.4530360767302 2 416.2335082888603 MULTI CID FTMS 0 0 0 15006 117315.0078125 0.7522677763548095 2 -0.2061920166015625 14 Unmodified _LPAYPASL_ ENSG00000132692|ENST00000329117|BCAN;nc|ENSG00000132692|Q96GW7-2|BCAN 30.19836241096484 0.408853459428176 4 {[TV]|[{I|L}S]}MPAS{I|L}{I|L} 8 4 + 27.234 0.0 0.0 3.2794 3.2794 63.692 0.0 0.0 0.0 1.249387366082999 2.218487496163561 1.249387366082999 0.9691001300805624 0 0.3182503180159344 1.2218487496163564 0.5 0.0 {[TV]|[{I|L}S]}MPAS{I|L}{I|L};{[TV]|[{I|L}S]}MAPS{I|L}{I|L};[{I|L}V]SCPS{I|L}{I|L};{[TV]|[{I|L}S]}MPA{I|L}S{I|L};{[TV]|[{I|L}S]}VCPS{I|L}{I|L};{[TV]|[{I|L}S]}MAP{I|L}S{I|L};[{I|L}V]SCP{I|L}S{I|L};{[TV]|[{I|L}S]}VCP{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RD]S{I|L}{I|L};{[TV]|[{I|L}S]}MP{I|L}AS{I|L} 3.2794;3.1627;3.1289;3.0122;2.9169;2.8955;2.8618;2.6498;2.0982;2.0752 -;-;-;-;-;-;-;-;-;- 356 1 1.299 85542.9 1.0 10121 4897 15006 HBL1_DMSO_200M_050219_2,15020 HBL1_DMSO_200M_050219_2,15020,LPAYPASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15021 79.085 354.0 190590.0 25 0 19326.0 + 27986 PLYLFDTV 8 100 484.259993286822 0 484.2582885622978 PEAK CID FTMS 0 0 0 15006 119269.609375 0.2924719178098988 36 -3.977218627929688 15 Unmodified _PLYLFDTV_ REV__ENST00000327300.11_1_1:32508253-32508379:+|nuORF;REV__ENST00000484270.2_1_1:32508253-32510936:+|nuORF 15.768221252438446 0.4767174489346095 4 CT 2 -1 11.722 0.0 0.0 1.2128 0.0 0.0 645.372817528919 114.05655084781483 759.4293683767338 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 CT 1.2128 - 56 + 1 1.299 55693.8 1.0 10122 4897 15006 HBL1_DMSO_200M_050219_2,15021 HBL1_DMSO_200M_050219_2,15021,PLYLFDTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15022 79.098 800.0 306980.0 25 0 34910.0 -1 0 134 994.9413292065676 1987.8681054799351 2 994.9440795779228 MULTI CID FTMS 0 0 0 15006 105050.265625 0.596063060957649 -5 0.45684814453125 16 4 [{I|L}T][YQ]{I|L}E{[YD]|[{M(Oxidation (M))|F}M]}CTMMEV[H{I|L}] 16 -1 + 46.469 0.0 0.0 2.3377 2.3377 44.904 0.0 0.0 0.0 14.711414271116393 0.6377289668947128 0.6377289668947128 0.0 0 0.0 2.0 1.3650741902630434 0.0 [{I|L}T][YQ]{I|L}E{[YD]|[{M(Oxidation (M))|F}M]}CTMMEV[H{I|L}];[{I|L}T][YK]{I|L}E{[YD]|[{M(Oxidation (M))|F}M]}CTMMEV[H{I|L}];[{I|L}T][YK]{I|L}E{[YD]|[{M(Oxidation (M))|F}M]}CTMMVE[H{I|L}];[{I|L}T][YQ]{I|L}E{[YD]|[{M(Oxidation (M))|F}M]}CTMMVE[H{I|L}];[NP]D{I|L}GYVTC{[YD]|[{M(Oxidation (M))|F}M]}E{I|L}[YQ][VP];{[TV]|[{I|L}S]}NP{M(Oxidation (M))|F}TVTC{[YD]|[{M(Oxidation (M))|F}M]}E{I|L}[YQ][VP];[NP]VEGYVTC{[YD]|[{M(Oxidation (M))|F}M]}E{I|L}[YQ][VP];{[QS]|[NT]}VP{M(Oxidation (M))|F}TVTC{[YD]|[{M(Oxidation (M))|F}M]}E{I|L}[YQ][VP];[DP]N{I|L}GYVTC{[YD]|[{M(Oxidation (M))|F}M]}E{I|L}[YQ][VP];{[TV]|[{I|L}S]}NP{I|L}CMTC{[YD]|[{M(Oxidation (M))|F}M]}E{I|L}[YK][VP] 2.3377;2.3377;2.2641;2.2641;1.9525;1.8116;1.8011;1.709;1.6121;1.5116 -;-;-;-;-;-;-;-;-;- 8094 + 1 1.299 161116.5 0.4900000095367431 10123 4897 15006 HBL1_DMSO_200M_050219_2,15022 HBL1_DMSO_200M_050219_2,15022, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15023 79.113 800.0 232260.0 25 0 14180.0 + 20916 LMYEHELEQL 10 186 652.8139661596072 1303.6133793860142 2 652.8160278201103 MULTI CID FTMS 0 0 0 15006 101276.7890625 0.5335797550825258 -1 0.051300048828125 17 Unmodified _LMYEHELEQL_ ENSG00000197892|ENST00000524189|KIF13B 86.33184430468982 0.0118786207050641 4 {[QN]|[E{I|L}]|[KN]}EHYM{I|L}EQ{I|L} 10 4 + 77.181 0.0 0.0 5.9205 5.9205 76.5 0.0 0.0 0.0 1.974659493024291 43.78712577491932 1.974659493024291 2.65884023688119 0 0.6237125054200234 0.4685210829577448 0.93986268792935 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}EHYM{I|L}EQ{I|L};{I|L}MKEMYE[{M(Oxidation (M))|F}T]{I|L};{[QN]|[E{I|L}]|[KN]}EHYME{I|L}Q{I|L};{I|L}MKMEYE[{M(Oxidation (M))|F}T]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YT]YM{I|L}EQ{I|L};{[QN]|[E{I|L}]|[KN]}HEYM{I|L}EQ{I|L};{[QN]|[E{I|L}]|[KN]}EHYEM{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}EHYE{I|L}MQ{I|L};{[QN]|[E{I|L}]|[KN]}EHYM{I|L}E[AG]{I|L};[AG][WD]E{I|L}M{I|L}EQ{I|L} 5.9205;5.7166;5.5545;5.4856;5.3871;5.3779;5.3236;5.2278;5.2175;5.098 -;-;-;-;-;-;-;-;-;- 25933 1 1.299 138626.1 0.5799999833106995 10124 4897 15006 HBL1_DMSO_200M_050219_2,15023 HBL1_DMSO_200M_050219_2,15023,LMYEHELEQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15024 79.127 800.0 41304.0 25 0 3304.0 -1 0 65 875.4203369021416 0 875.4203369021416 PEAK CID FTMS 0 0 0 -1 0 18 4 W 1 -1 6.9897 0.0 0.0 0.39991 0.0 0.0 872.3364063459 686.3835543268186 1558.7199606727186 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.39991 - 60 + 1 1.299 30902.8 0.6800000071525574 10125 4897 15006 HBL1_DMSO_200M_050219_2,15024 HBL1_DMSO_200M_050219_2,15024, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15025 79.129 60.0 1435600.0 25 0 331640.0 + 12648 GVLDTLTKV 9 92 473.2844723062626 944.5543916793252 2 473.2845641970634 MULTI CID FTMS 0 0 0 15006 94285.265625 0.0437458749846308 -2 0.18035888671875 19 Unmodified _GVLDTLTKV_ ENSG00000214114|ENST00000397572|MYCBP;ENST00000495043.5_1_1:39330344-39338774:-|nuORF 53.832793166522166 0.0319663582346103 4 [VG]{I|L}DT{I|L}TKV 9 0 + 84.435 0.0 0.0 8.9391 8.9391 95.89 0.0 0.0 0.0 27.078343878162343 11.962724883926654 11.962724883926654 14.113039702300185 0 0.7302046884880937 2.0 1.1549471895720984 0.0 + + [VG]{I|L}DT{I|L}TKV;[VG]{I|L}DT{I|L}[KS]{I|L};[VG]{I|L}R[MT]{I|L}R;{NN|[MP]|[D{I|L}]|[EV]}T{I|L}[KS]{I|L}R;[VG]{I|L}[VG][MT]{I|L}R;R[{M(Oxidation (M))|F}V][VP]TKV;[{I|L}T]D{I|L}[KS]{I|L}GV;R[{M(Oxidation (M))|F}V]KVTPV;[{I|L}T]T[WR]{I|L}R;[{I|L}T]TVKD{I|L}GV 8.9391;7.445;4.1344;3.7206;3.1538;2.5492;2.5383;2.3844;2.288;2.2337 +;-;-;-;-;-;-;-;-;- + 481 + 1 1.299 73255.2 1.0 10126 4897 15006 HBL1_DMSO_200M_050219_2,15025 HBL1_DMSO_200M_050219_2,15025,GVLDTLTKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15027 79.133 13.0 3539900.0 25 0 565470.0 + 5036 DGWTPLHV 8 78 462.73228478493735 923.4500166366748 2 462.7326843142509 MULTI CID FTMS 0 0 0 15026 3266003.25 0.338597406736257 2 -0.2098922729492187 1 Unmodified _DGWTPLHV_ ENSG00000183475|ENST00000332783|ASB7;nc|ENSG00000183475|Q9H672-2|ASB7 34.18733598223924 0.3315367612694167 4 {[QD]|[EN]|[WG]|[KD]|[RS]}DTP{I|L}[HV] 8 2 {[QD]|[EN]|[WG]|[KD]|[RS]}D + + 25.713 21.528 6.0112 2.7845 2.7845 45.511 0.0 0.0 0.0 0.0 4.185756335471424 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}DTP{I|L}[HV] 2.7845 - 65 + 1 1.302 41935.1 1.0 10127 4898 15026 HBL1_DMSO_200M_050219_2,15027 HBL1_DMSO_200M_050219_2,15027,DGWTPLHV False True DGWTPLHV 79.133182 462.732684314251 235730088.0 15026.0 ENSG00000183475|ENST00000332783|ASB7;;nc|ENSG00000183475|Q9H672-2|ASB7 8.574651400248209 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15028 79.134 6.1 12006000.0 25 0 2511500.0 + 13672 HPYRLILTV 9 74 556.3347745225931 1110.654996111986 2 556.3353149294853 MULTI CID FTMS 0 0 0 15026 9506801.0 1.0 0 0.0 2 Unmodified _HPYRLILTV_ ENSG00000105397|ENST00000525621|TYK2 38.17557092003332 0.0854718145212029 4 HPY{I|L}{I|L}R{I|L}TV 9 2 + 48.082 0.0 0.0 4.3292 4.3292 83.993 0.0 0.0 0.0 30.365612383257385 7.094465368295886 7.094465368295886 48.082137524178 0 2.048455006504028 0.0 0.3494850021680094 0.0 HPY{I|L}{I|L}R{I|L}TV 4.3292 - 104 + 1 1.302 58873.3 1.0 10128 4898 15026 HBL1_DMSO_200M_050219_2,15028 HBL1_DMSO_200M_050219_2,15028,HPYRLILTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15029 79.136 21.0 3000100.0 25 0 233470.0 + 13629 HPPSHWPLI 9 85 542.2906042372043 1082.5666555412083 2 542.2908813357353 MULTI CID FTMS 0 0 0 15026 2363540.0 0.401618374863924 5 -0.5354766845703125 3 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 67.34385681178166 0.0221257235307089 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L} 9 2 + 52.968 0.0 0.0 4.8928 4.8928 74.486 0.0 0.0 0.0 4.6753908465964855 8.5827208845118 4.6753908465964855 3.851518780601921 0 1.6479400086720375 0.0 0.7614393726401688 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPHWP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPWPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SWPPH{I|L}{I|L};[{I|L}V]VDD{[CP]|[EA]}P{I|L}{I|L};[PG]QQ{[HG]|PP}HP{I|L}{I|L} 4.8928;4.537;4.4609;4.0963;3.4429;3.1673;2.7266;1.0558;0.74961 -;-;-;-;-;-;-;-;- 311 1 1.302 56089.3 1.0 10129 4898 15026 HBL1_DMSO_200M_050219_2,15029 HBL1_DMSO_200M_050219_2,15029,HPPSHWPLI True True HPPSHWPLI 79.135538 542.290881335735 434618112.0 15026.0 ENSG00000168036|ENST00000349496|CTNNB1 7.9337944984436035 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15030 79.137 22.0 2391300.0 25 0 197630.0 + 43151 VYPQYVIEY 9 63 587.2949481527189 1172.5753433722375 2 587.2952758669853 MULTI CID FTMS 0 0 0 15026 2044845.25 0.1342264267264843 -3 0.35186767578125 4 Unmodified _VYPQYVIEY_ ENSG00000105939|ENST00000242351|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1 36.04419817259434 0.0971720506436186 4 [QP]YVYV 6 5 39.213 0.0 0.0 3.3442 0.0 0.0 0.0 420.17795636173065 420.17795636173065 19.26477176880759 0.0 0.0 0.0 0 0.0 1.0 0.0 0.3807196863200844 [QP]YVYV 3.3442 - 222 1 1.302 47044.8 1.0 10130 4898 15026 HBL1_DMSO_200M_050219_2,15030 HBL1_DMSO_200M_050219_2,15030,VYPQYVIEY True True VYPQYVIEY 79.136717 587.295275866985 184847344.0 15026.0 nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1;;ENSG00000105939|ENST00000242351|ZC3HAV1 4.841905911763509 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15031 79.138 32.0 1846600.0 25 0 161590.0 15532 IPVLANFIV 9 101 493.30756668585485 984.6005804385096 2 493.3073913455009 MULTI CID FTMS 0 0 0 15026 1129946.875 0.1890645408008749 34 -3.6598968505859375 5 Unmodified _IPVLANFIV_ ENSG00000146085|ENST00000274813|MMUT 28.486842064014134 0.1687311288560894 4 {I|L}P 2 7 43.271 0.0 0.0 4.3948 0.0 0.0 0.0 771.4434908502561 771.4434908502561 11.84447197927419 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}P 4.3948 + + 369 + 1 1.302 50736.9 1.0 10131 4898 15026 HBL1_DMSO_200M_050219_2,15031 HBL1_DMSO_200M_050219_2,15031,IPVLANFIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15032 79.139 58.0 826800.0 25 0 66206.0 + 25112 MPYPAPNVPVV 11 76 592.3122931769489 1182.6100334206976 2 592.3129760622978 MULTI CID FTMS 0 0 0 15026 963047.3125 0.7519557550825524 1 -0.0346832275390625 6 Unmodified _MPYPAPNVPVV_ ENSG00000133961|ENST00000555238|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-9|NUMB 19.256988751693697 0.6345794173041263 4 [VP][MT]M[NP]V 8 7 35.463 0.0 0.0 2.9987 0.0 0.0 0.0 310.17489901896323 310.17489901896323 20.858565581929653 0.0 0.0 0.0 0 0.5 2.0 0.0 0.3807196863200844 [VP][MT]M[NP]V 2.9987 - 155 1 1.302 44179.0 1.0 10132 4898 15026 HBL1_DMSO_200M_050219_2,15032 HBL1_DMSO_200M_050219_2,15032,MPYPAPNVPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15033 79.141 51.0 1124000.0 25 0 91972.0 + 31296 RLYPEGLAQL 10 72 580.3271076952326 1158.639662457265 2 580.3275634646416 MULTI CID FTMS 0 0 0 15026 913707.3125 0.1291402788302446 -2 0.222808837890625 7 Unmodified _RLYPEGLAQL_ ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF 28.181266145913348 0.3355154477840527 4 [R{I|L}]Y[EP]G{I|L}AQ{I|L} 10 0 + 45.234 0.0 0.0 3.9041 3.9041 71.671 0.0 0.0 0.0 3.4678748622465605 32.134928107446186 3.4678748622465605 4.388242492217849 0 0.3807196863200844 0.0 0.0 0.0 + + [R{I|L}]Y[EP]G{I|L}AQ{I|L};[QA][KS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{I|L}AQ{I|L};[R{I|L}]Y[EP]G{I|L}A[AG]{I|L};[VP][HV][EP]G{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}[PG][YV]G{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}[PG][YR]{I|L}AQ{I|L};[R{I|L}]Y[EP][Q{I|L}]Q{I|L};[VP]{[CP]|[EA]}[YR]{I|L}AQ{I|L} 3.9041;3.5253;3.1131;3.0447;2.7013;2.1337;1.9818;1.8739 +;-;-;-;-;-;-;- + 165 1 1.302 48557.8 1.0 10133 4898 15026 HBL1_DMSO_200M_050219_2,15033 HBL1_DMSO_200M_050219_2,15033,RLYPEGLAQL False True RLYPEGLAQL 79.140715 580.327563464642 125162296.0 15026.0 ENST00000563305.1_1_16:67472744-67473248:-|nuORF;;ENSG00000159720|ENST00000290949|ATP6V0D1 7.381498018900554 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15034 79.142 39.0 1434300.0 25 0 129560.0 + 42881 MPMMPGPPM 9 96 494.77879116608005 987.54302939896 2 494.7788574099541 MULTI CID FTMS 0 0 0 15026 897717.8125 0.6754565538046957 -1 0.1715087890625 8 Unmodified _VVNIQTIAM_ ENSG00000124562|ENST00000244520|SNRPC 28.486842064014134 0.1687311288560894 4 PPM 3 8 21.682 0.0 0.0 2.1956 0.0 0.0 644.3852593484438 0.0 644.3852593484438 0.0 -3.4678748622465605 -3.4678748622465605 0.0 0 0.0 0.0 0.0 0.0 PPM 2.1956 - 348 + 1 1.302 47408.9 1.0 10134 4898 15026 HBL1_DMSO_200M_050219_2,15034 HBL1_DMSO_200M_050219_2,15034,VVNIQTIAM False True MPMMPGPPM 79.141892 494.7795 24553630.0 15026.0 ENSG00000124562|ENST00000244520|SNRPC 6.885395685831706 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15035 79.143 64.0 1043200.0 25 0 142580.0 + 5665 DPFPWQQKV 9 84 572.7933062744165 1143.572059615633 2 572.7933227419853 MULTI CID FTMS 0 0 0 15026 816485.6875 0.7883005435229602 -2 0.222808837890625 9 Unmodified _DPFPWQQKV_ ENSG00000182541|ENST00000331728|LIMK2;nc|ENSG00000182541|P53671-2|LIMK2;nc|ENSG00000182541|P53671-3|LIMK2 61.357469665136826 0.0253304979873734 4 [DP]{M(Oxidation (M))|F}PWQQKV 9 0 + 67.846 0.0 0.0 5.9328 5.9328 85.429 0.0 0.0 0.0 27.841087759491856 7.836455609270629 7.836455609270629 9.208187539523747 0 1.0 1.6989700043360187 0.0 1.305462187404089 + + [DP]{M(Oxidation (M))|F}PWQQKV;[DP]{M(Oxidation (M))|F}PWQ[AG]KV;[DP]{M(Oxidation (M))|F}PW[AG]QKV;[DP]{M(Oxidation (M))|F}P{[DA]|[EG]}QQKV;[DP]{M(Oxidation (M))|F}PW[AG][AG]KV;[DP]{M(Oxidation (M))|F}P{[DA]|[EG]}Q[AG]KV;[DP]{M(Oxidation (M))|F}P{[DA]|[EG]}[AG]QKV;DD{I|L}{I|L}WQQKV;DD{I|L}{I|L}WQ[AG]KV;DD{I|L}{I|L}W[AG]QKV 5.9328;5.1276;5.1276;5.1276;4.3262;4.3262;4.3262;1.4077;0.60244;0.60244 +;-;-;-;-;-;-;-;-;- + 265 + 1 1.302 60390.7 1.0 10135 4898 15026 HBL1_DMSO_200M_050219_2,15035 HBL1_DMSO_200M_050219_2,15035,DPFPWQQKV True True DPFPWQQKV 79.143451 572.793322741985 12515924.0 15026.0 nc|ENSG00000182541|P53671-2|LIMK2;;nc|ENSG00000182541|P53671-3|LIMK2;;ENSG00000182541|ENST00000331728|LIMK2 9.154501914978027 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15036 79.145 73.0 1075800.0 25 0 140950.0 + 4347 DASLVFKV 8 88 439.7525915049388 877.4906300766776 2 439.7527953982353 MULTI CID FTMS 0 0 0 15026 812537.9375 0.0765091261945224 -3 0.35186767578125 10 Unmodified _DASLVFKV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602816-23603164:-|nuORF 64.23631603340823 0.116217441302575 4 {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV 8 0 + 78.039 0.0 0.0 8.8934 8.8934 96.88 0.0 0.0 0.0 53.28438639803649 12.914930551903224 12.914930551903224 20.6687674038008 0 1.0994850021680094 2.0 0.0 0.2887254899964357 + + {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV;{[DA]|[EG]}S{I|L}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 8.8934;6.538 +;- + 121 + 1 1.302 66235.0 1.0 10136 4898 15026 HBL1_DMSO_200M_050219_2,15036 HBL1_DMSO_200M_050219_2,15036,DASLVFKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15037 79.146 49.0 1028400.0 25 0 135180.0 + 25756 NITDKGIIAL 10 78 529.3162366178593 1056.6179203025183 2 529.3175536990166 MULTI CID FTMS 0 0 0 15026 737072.0625 0.2547786196306745 7 -0.7298355102539062 11 Unmodified _NITDKGIIAL_ ENSG00000125375|ENST00000557421|DMAC2L;ENST00000554438.5_1_14:50779073-50792438:+|nuORF;ENST00000555939.5_1_14:50779073-50791268:+|nuORF;ENST00000556962.1_1_14:50789283-50790835:+|nuORF 24.99096001346401 0.4071966087057876 4 {[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}{I|L}N{I|L}A{I|L} 10 5 + 54.287 0.0 0.0 5.1378 5.1378 74.058 0.0 0.0 0.0 22.10286850192788 38.80265290781964 22.10286850192788 3.0102999566398125 0 1.242992819099939 2.0 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}{I|L}N{I|L}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}AR{I|L}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}N{I|L}{I|L}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}{I|L}NA{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}{I|L}ARA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}ARA{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}{I|L}GG{I|L}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}A{I|L}RA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}N{I|L}A{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}{I|L}AN{I|L}{I|L} 5.1378;4.8529;4.6863;4.6176;4.5222;4.3327;4.2705;4.2373;4.166;4.0019 -;-;-;-;-;-;-;-;-;- 510 1 1.302 46828.1 1.0 10137 4898 15026 HBL1_DMSO_200M_050219_2,15037 HBL1_DMSO_200M_050219_2,15037,NITDKGIIAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15038 79.149 145.0 781130.0 25 0 56799.0 -1 0 112 974.9627004435516 1947.910847953904 2 974.9634887576104 MULTI CID FTMS 0 0 0 15026 715231.375 1.0 0 0.0 12 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAPG[RN]EDYQ{[TV]|[{I|L}S]} 17 -1 + 87.757 0.0 0.0 4.5052 4.5052 72.612 0.0 0.0 0.0 3.557395055694116 3.557395055694116 3.557395055694116 3.557395055694116 0 2.443672679568534 0.0 0.5 1.7416440611282624 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAPG[RN]EDYQ{[TV]|[{I|L}S]};[NP]{I|L}NADE[RN]GPAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]VQADE[RN]GPAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NWE[RN]GPAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NAPG[RN]EDYQ{[TV]|[{I|L}S]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGAPG[RN]EDYQ{[TV]|[{I|L}S]};[NP]VQWE[RN]GPAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}QGDE[RN]GPAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGADE[RN]GPAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NADE[RN]GPAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.5052;4.3225;4.2086;4.131;4.0432;4.0432;4.0171;3.9637;3.8613;3.8613 -;-;-;-;-;-;-;-;-;- 4896 + 1 1.302 76379.6 1.0 10138 4898 15026 HBL1_DMSO_200M_050219_2,15038 HBL1_DMSO_200M_050219_2,15038, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15039 79.151 75.0 724770.0 25 0 182020.0 40068 VGGVLYDK 8 53 425.73895003504856 849.4633471368971 2 425.7392150759697 MULTI CID FTMS 0 0 0 15026 689529.4375 1.0 0 0.0 13 Unmodified _VGGVLYDK_ ENSG00000165733|ENST00000374518|BMS1 5.230669730166228 0.792582437072536 4 VA 2 7 19.464 0.0 0.0 2.2913 0.0 0.0 0.0 676.3358671750041 676.3358671750041 12.474250108400469 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA 2.2913 - 5 + 1 1.302 48066.7 1.0 10139 4898 15026 HBL1_DMSO_200M_050219_2,15039 HBL1_DMSO_200M_050219_2,15039,VGGVLYDK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15040 79.153 82.0 1119000.0 25 0 121300.0 + 3600 DAANVMVYV 9 91 981.4697028557551 980.4624263891552 1 981.4711181521416 MULTI CID FTMS 0 0 0 15026 646461.5 0.9719824228349032 -1 0.1715087890625 14 Unmodified _DAANVMVYV_ ENSG00000115548|ENST00000312912|KDM3A;ENST00000441719.5_1_2:86711112-86716803:+|nuORF 78.7280429016045 0.0178249292250809 4 {[NV]|[RG]}AADMVYV 9 4 + 79.934 0.0 0.0 8.1527 8.1527 84.6 0.0 0.0 0.0 3.1336373073770574 16.47817481888636 3.1336373073770574 3.1336373073770574 0 0.7302046884880937 1.0457574905606752 0.8391368308784531 1.774227503252014 {[NV]|[RG]}AADMVYV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NVMVYV;{[DA]|[EG]}ANVMVYV;QQDVMVYV;{[QG]|[NA]}ADVMVYV;QQVDMVYV;{[QG]|[NA]}AVDMVYV;[Q{I|L}]NDMVYV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GGVMVYV;{[NV]|[RG]}AADVMYV 8.1527;7.8331;7.7809;7.5261;7.2657;7.219;6.9587;6.912;6.8884;6.8505 -;-;+;-;-;-;-;-;-;- + 2395 1 1.302 64661.3 1.0 10140 4898 15026 HBL1_DMSO_200M_050219_2,15040 HBL1_DMSO_200M_050219_2,15040,DAANVMVYV True True DAANVMVYV 79.153021 981.471118152142 7623766.5 15026.0 ENST00000441719.5_1_2:86711112-86716803:+|nuORF;;ENSG00000115548|ENST00000312912|KDM3A 6.651480038960774 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15041 79.154 53.0 1210800.0 25 0 157500.0 + 12659 GVLGPIINKV 10 94 505.323938609828 1008.633324286456 2 505.3243286013603 MULTI CID FTMS 0 0 0 15026 597282.1875 0.8419375607786076 -1 0.1715087890625 15 Unmodified _GVLGPIINKV_ ENSG00000105808|ENST00000262940|RASA4;ENSG00000170667|ENST00000465829|RASA4B;ENST00000523568.1_7:102228019-102246337:-|nuORF;nc|ENSG00000105808|O43374-2|RASA4 41.8396318013385 0.1381409678234242 4 [VG]{I|L}GP{I|L}{I|L}NKV 10 0 + 63.215 0.0 0.0 6.2674 6.2674 85.913 0.0 0.0 0.0 36.12613821018577 7.957122609743195 7.957122609743195 9.164539485499256 0 0.75 1.6989700043360187 0.0 0.5114393726401688 + + [VG]{I|L}GP{I|L}{I|L}NKV;[VG]{I|L}GP{I|L}{I|L}GGKV 6.2674;5.3587 +;- + 487 + 1 1.302 51445.7 1.0 10141 4898 15026 HBL1_DMSO_200M_050219_2,15041 HBL1_DMSO_200M_050219_2,15041,GVLGPIINKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15042 79.156 87.0 673770.0 25 0 120570.0 + 24005 LVWPAVAVLV 10 69 533.8348105728094 1065.6550682124189 2 533.8350707888603 MULTI CID FTMS 0 0 0 15026 575483.8125 0.6185510477506895 1 -0.0346832275390625 16 Unmodified _LVWPAVAVLV_ REV__ENSG00000142166|ENST00000270139|IFNAR1;REV__nc|ENSG00000142166|P17181-2|IFNAR1;REV__nc|ENSG00000142166|P17181-3|IFNAR1 18.13498045792455 0.5432546531930572 4 [{I|L}V][WP]Q{I|L}{I|L}VV 9 -1 + 56.335 0.0 0.0 5.2864 5.2864 72.31 0.0 0.0 0.0 1.7609125905568137 16.478174818886373 1.7609125905568137 1.7609125905568137 0 0.8252574989159953 1.3979400086720375 0.0 0.0 [{I|L}V][WP]Q{I|L}{I|L}VV;[VP][W{I|L}]Q{I|L}{I|L}VV;[{I|L}V][WP][AG]{I|L}{I|L}VV;[EP][R{I|L}]Q{I|L}{I|L}VV;[VP][W{I|L}][AG]{I|L}{I|L}VV;[EP]Q[R{I|L}]{I|L}{I|L}VV;[EP][R{I|L}][AG]{I|L}{I|L}VV;[EP][AG][R{I|L}]{I|L}{I|L}VV;{[CP]|[EA]}[PG][R{I|L}]{I|L}{I|L}VV 5.2864;5.1212;4.4223;4.2798;4.2571;3.9973;3.4157;3.1332;2.581 -;-;-;-;-;-;-;-;- 86 1 1.302 53983.5 1.0 10142 4898 15026 HBL1_DMSO_200M_050219_2,15042 HBL1_DMSO_200M_050219_2,15042,LVWPAVAVLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15043 79.158 98.0 636400.0 25 0 58524.0 + 25932 NLLTHIENV 9 117 526.7882997729157 1051.562046612631 2 526.7908203005791 MULTI CID FTMS 0 0 0 15026 502892.78125 0.5639543775217948 -3 0.35186767578125 17 Unmodified _NLLTHIENV_ ENSG00000129292|ENST00000395386|PHF20L1;ENST00000477051.1_1_8:133854703-133858165:+|nuORF 49.52724829834842 0.0414064571532091 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TH[KT]PE 9 4 + 47.412 0.0 0.0 4.5087 4.5087 74.563 0.0 0.0 0.0 12.213403050078774 6.645293596321125 6.645293596321125 4.832881222565248 0 1.9049471895720984 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TH[KT]PE;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TH{I|L}{[NV]|[RG]}E;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}THE{I|L}NV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}THD[Q{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TH{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V;[HT]{I|L}{I|L}E[{I|L}T]PE;{[QV]|[N{I|L}]|[RA]|[KV]}[{M(Oxidation (M))|F}V]HP{I|L}NV;[H{I|L}]T{I|L}E[{I|L}T]PE;[HT]{I|L}{I|L}N[KT]PE;[H{I|L}]T{I|L}N[KT]PE 4.5087;4.0491;3.8768;3.5687;3.4766;3.3473;3.0986;3.0969;2.9919;2.7415 -;-;-;-;+;-;-;-;-;- + 1501 1 1.302 59190.6 1.0 10143 4898 15026 HBL1_DMSO_200M_050219_2,15043 HBL1_DMSO_200M_050219_2,15043,NLLTHIENV True True NLLTHIENV 79.158473 526.790820300579 13308432.0 15026.0 ENSG00000129292|ENST00000395386|PHF20L1;;ENST00000477051.1_1_8:133854703-133858165:+|nuORF 6.765780766805013 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15044 79.16 58.0 1215800.0 25 0 114980.0 + 44698 YPFQIHSI 8 107 502.7637987500144 0 502.7628967165947 PEAK CID FTMS 0 0 0 15026 496184.59375 0.1622472012755864 -3 0.35186767578125 18 Unmodified _YPFQIHSI_ ENSG00000101290|ENST00000460006|CDS2;ENSG00000163624|ENST00000295887|CDS1;ENST00000379070.3_1_20:5157275-5170877:+|nuORF 64.23631603340823 0.0061236158259023 4 P{M(Oxidation (M))|F}Q{I|L}HT 6 3 49.36 0.0 0.0 4.9187 0.0 0.0 163.06177167633683 114.05667291812732 277.11844459446417 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 1.329689690656103 0.2742275032520141 P{M(Oxidation (M))|F}Q{I|L}HT 4.9187 - 212 + 1 1.302 56749.5 1.0 10144 4898 15026 HBL1_DMSO_200M_050219_2,15044 HBL1_DMSO_200M_050219_2,15044,YPFQIHSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15045 79.162 90.0 610790.0 25 0 100460.0 + 11057 GDPVQLLTI 9 81 478.2765449638088 954.5385369944177 2 478.2770263552666 MULTI CID FTMS 0 0 0 15026 479000.40625 0.5256346103212082 1 -0.0346832275390625 19 Unmodified _GDPVQLLTI_ REV__ENSG00000007237|ENST00000432992|GAS7 25.399314129420983 0.2080152500878129 4 [DP]GQV{I|L}T{I|L}{I|L} 9 -1 + 40.665 0.0 0.0 4.2602 4.2602 75.047 0.0 0.0 0.0 2.922152515121219 19.211594421910974 2.922152515121219 6.262874945799759 0 0.3182503180159344 0.0 0.0 0.7059771852360797 [DP]GQV{I|L}T{I|L}{I|L};[DP]GQ{I|L}VT{I|L}{I|L};[DP]G[AG]V{I|L}T{I|L}{I|L};[DP]G[AG]{I|L}VT{I|L}{I|L};[DP]G[KA]{I|L}E{I|L}{I|L};[DP][KQ]{I|L}E{I|L}{I|L} 4.2602;3.6041;2.5559;2.2406;1.0564;0.69309 -;-;-;-;-;- 120 1 1.302 47261.1 1.0 10145 4898 15026 HBL1_DMSO_200M_050219_2,15045 HBL1_DMSO_200M_050219_2,15045,GDPVQLLTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15046 79.163 64.0 963690.0 25 0 104420.0 + 44028 YIIEVNARL 9 76 545.817998652341 0 545.8176757693291 PEAK CID FTMS 0 0 0 15026 468271.3125 0.7590098431761718 -1 0.1715087890625 20 Unmodified _YIIEVNARL_ ENSG00000084774|ENST00000264705|CAD 17.11289562659939 0.230679707888486 4 {I|L}{I|L}EV 4 5 26.186 0.0 0.0 2.4032 0.0 0.0 163.0672584357381 469.2547396295532 632.3219980652913 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}{I|L}EV 2.4032 + + 30 + 1 1.302 52503.0 1.0 10146 4898 15026 HBL1_DMSO_200M_050219_2,15046 HBL1_DMSO_200M_050219_2,15046,YIIEVNARL False True YIIEVNARL 79.163469 545.817675769329 4699362.5 15026.0 ENSG00000084774|ENST00000264705|CAD 2.989414691925049 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15048 79.168 131.0 591730.0 25 0 52724.0 + 12844 GVVDPRAISVL 11 86 563.3348653606411 1124.655177788082 2 563.3348266482353 MULTI CID FTMS 0 0 0 15047 427749.4375 0.1867206775033917 3 -0.3614044189453125 1 Unmodified _GVVDPRAISVL_ ENSG00000244687|ENST00000371674|UBE2V1;ENST00000483534.5_1_20:48699307-48713022:-|nuORF;nc|ENSG00000244687|Q13404-1|UBE2V1;nc|ENSG00000244687|Q13404-2|UBE2V1;nc|ENSG00000244687|Q13404-6|UBE2V1;nc|ENSG00000244687|Q13404-7|UBE2V1 37.07464296494664 0.257459615863268 4 [{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDRV{I|L} 10 8 + 42.955 0.0 0.0 3.8194 3.8194 67.665 0.0 0.0 0.0 1.9627248839266545 12.61586719087747 1.9627248839266545 2.2834748590793907 0 0.3054621874040891 1.0 1.1307196863200843 0.0 [{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVDRV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVRDV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SV[PS]SV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SVD[VG]V{I|L};[Q{I|L}][HK]MTRV{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}SV[VG]DV{I|L};[{I|L}P][WK]V[PS]SV{I|L};[VP][Q{I|L}]SVDRV{I|L};RV[{M(Oxidation (M))|F}V]V[HK]Q{I|L};[VP][Q{I|L}]SVRDV{I|L} 3.8194;3.6164;3.3369;3.0046;2.9314;2.8015;2.7987;2.7142;2.5632;2.5111 -;-;-;-;-;-;-;-;-;- 619 1 1.302 69292.5 1.0 10147 4899 15047 HBL1_DMSO_200M_050219_2,15048 HBL1_DMSO_200M_050219_2,15048,GVVDPRAISVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15049 79.179 586.0 304500.0 25 0 26343.0 + 35961 SVPNKDVFQEL 11 163 638.332530858804 1274.650508784408 2 638.3334838747978 MULTI CID FTMS 0 0 0 15047 343637.0625 0.1944495823512465 8 -0.91754150390625 2 Unmodified _SVPNKDVFQEL_ ENSG00000115919|ENST00000264170|KYNU 51.487983226225225 0.1093896055713593 4 [VS]{I|L}{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}VDK 9 8 91.124 0.0 0.0 7.149 0.0 0.0 0.0 208.07341943912343 208.07341943912343 43.86931783443302 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.524227503252014 1.4802046884880935 [VS]{I|L}{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}VDK 7.149 - 8297 + 1 1.302 136408.0 1.0 10148 4899 15047 HBL1_DMSO_200M_050219_2,15049 HBL1_DMSO_200M_050219_2,15049,SVPNKDVFQEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15050 79.18 76.0 749240.0 25 0 54705.0 + 18603 KLLPSVTEL 9 94 500.3072336658283 998.5999143984566 2 500.3077880740166 MULTI CID FTMS 0 0 0 15047 439373.03125 1.0 0 0.0 3 Unmodified _LAEAELLKL_ ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-21|TAF1;ENST00000483365.1_1_X:70596867-70597689:+|nuORF;nc|ENSG00000147133|P21675-1|TAF1;ENSG00000122728|ENST00000242310|TAF1L;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-25|TAF1;nc|ENSG00000147133|P21675-23|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-24|TAF1 28.486842064014134 0.1687311288560894 4 [{I|L}A]A{I|L}{[VA]|[{I|L}G]}V{[ET]|[MV]}{I|L} 10 6 + 49.666 0.0 0.0 4.9735 4.9735 78.141 0.0 0.0 0.0 17.69286866903428 37.03402196076127 17.69286866903428 6.53212513775344 0 0.6989700043360187 1.3010299956639813 0.0 0.0 [{I|L}A]A{I|L}{[VA]|[{I|L}G]}V{[ET]|[MV]}{I|L};[{I|L}A]A{I|L}[R{I|L}]{[ET]|[MV]}{I|L} 4.9735;4.3194 -;- 185 1 1.302 51927.0 1.0 10149 4899 15047 HBL1_DMSO_200M_050219_2,15050 HBL1_DMSO_200M_050219_2,15050,LAEAELLKL False False KLLPSVTEL 79.180325 500.307788074017 3430763.0 15047.0 ENSG00000147133|ENST00000423759|TAF1;;nc|ENSG00000147133|P21675-18|TAF1;;nc|ENSG00000147133|P21675-21|TAF1;;ENST00000483365.1_1_X:70596867-70597689:+|nuORF;;nc|ENSG00000147133|P21675-1|TAF1;;ENSG00000122728|ENST00000242310|TAF1L;;nc|ENSG00000147133|P21675-19|TAF1;;nc|ENSG00000147133|P21675-17|TAF1;;nc|ENSG00000147133|P21675-16|TAF1;;nc|ENSG00000147133|P21675-25|TAF1;;nc|ENSG00000147133|P21675-23|TAF1;;nc|ENSG00000147133|P21675-15|TAF1;;nc|ENSG00000147133|P21675-13|TAF1;;nc|ENSG00000147133|P21675|TAF1;;nc|ENSG00000147133|P21675-22|TAF1;;nc|ENSG00000147133|P21675-20|TAF1;;nc|ENSG00000147133|P21675-24|TAF1 0.8312540054321289 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15051 79.19 576.0 217050.0 25 0 25343.0 -1 LSSFRRKVRM 10 133 648.3745712922572 1294.7345896513143 2 648.3741332888603 MULTI CID FTMS 0 0 0 15047 381666.09375 0.7555837703826968 -2 0.2061920166015625 4 Oxidation (M) _LSSFRRKVRM(Oxidation (M))_ ENSG00000168769|ENST00000380013|TET2;TET2|p.N1748Tfs*15|1|0.17|ENSG00000168769|chr4:105275751-105275751|A/-|frameshift_variant 3.5964929083625545 0.7100006075494749 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q 3 -1 11.26 0.0 0.0 0.86964 0.0 0.0 0.0 919.5324161496144 919.5324161496144 0.7750061932122847 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q 0.86964 - 121 1 1.302 105345.9 1.0 10150 4899 15047 HBL1_DMSO_200M_050219_2,15051 HBL1_DMSO_200M_050219_2,15051,LSSFRRKVRM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15052 79.195 264.0 619980.0 25 0 80564.0 + 38553 TSTKKSKG 8 126 418.74455111244697 835.474549291694 2 418.7444335818291 MULTI CID FTMS 0 0 0 15047 369979.90625 0.9171933907359212 -1 0.0346832275390625 5 Unmodified _TSTKKSKG_ REV__ENSG00000186854|ENST00000409520|TRABD2A;REV__nc|ENSG00000186854|Q86V40-2|TRABD2A 0.6014990680409731 0.820681427635312 4 VV{I|L}G 4 -1 32.838 0.0 0.0 3.9304 0.0 0.0 0.0 464.2115877740844 464.2115877740844 14.83507208758293 0.0 0.0 0.0 0 0.4957416651753049 1.5228787452803376 0.0 0.0 VV{I|L}G 3.9304 - 228 + 1 1.302 129952.4 1.0 10151 4899 15047 HBL1_DMSO_200M_050219_2,15052 HBL1_DMSO_200M_050219_2,15052,TSTKKSKG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15053 79.198 141.0 513670.0 25 0 47410.0 + 31159 RLPDTALPTL 10 83 548.8216094916753 1095.6286660501503 2 548.8223754763603 MULTI CID FTMS 0 0 0 15047 333964.15625 0.5547788153079737 -1 0.0346832275390625 6 Unmodified _RLPDTALPTL_ ENSG00000262246|ENST00000251166|CORO7;ENST00000575531.5_1_16:4407102-4412712:-|nuORF;ENST00000575714.5_1_16:4408319-4455566:-|nuORF;nc|ENSG00000262246|P57737-2|CORO7;nc|ENSG00000262246|P57737-3|CORO7;nc|ENSG00000262246|P57737-4|CORO7 18.373094154950223 0.5392593366289069 4 [TP]{I|L}[WR]AP[KQ] 9 8 + 32.219 0.0 0.0 2.9407 2.9407 79.154 0.0 0.0 0.0 9.806110162353493 5.386730124635694 5.386730124635694 28.327935343467114 0 0.0 1.3979400086720375 0.2887254899964357 0.0 [TP]{I|L}[WR]AP[KQ];[{I|L}T]P[WR]AP[KQ] 2.9407;0.35512 -;- 145 1 1.302 62295.7 1.0 10152 4899 15047 HBL1_DMSO_200M_050219_2,15053 HBL1_DMSO_200M_050219_2,15053,RLPDTALPTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15054 79.209 646.0 383590.0 25 0 16928.0 + 30623 RFIPYTEEF 9 194 601.2982897212223 1200.5820265092443 2 601.2980224490166 MULTI CID FTMS 0 0 0 15047 298821.59375 1.0 0 0.0 7 Unmodified _RFIPYTEEF_ ENSG00000107651|ENST00000369075|SEC23IP;nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP 69.10491478415734 0.0214449631113747 4 [R{M(Oxidation (M))|F}]{I|L}PYTEE{M(Oxidation (M))|F} 9 0 + 65.187 0.0 0.0 5.4297 5.4297 76.686 0.0 0.0 0.0 3.751286497293584 16.478174818886373 3.751286497293584 3.751286497293584 0 1.1549471895720984 0.0 0.8494850021680094 0.6549471895720985 + + [R{M(Oxidation (M))|F}]{I|L}PYTEE{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TE[R{I|L}]{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[{I|L}T]{M(Oxidation (M))|F}E[R{I|L}]{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]{I|L}AN{[SA]|[TG]}{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[ET]|[MV]}YP[R{I|L}]{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}P{I|L}[{I|L}P]EEE{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][DV][R{I|L}]{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TEE[R{I|L}]{M(Oxidation (M))|F}{M(Oxidation (M))|F};[EP][YT][R{I|L}]{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TE[R{I|L}]E{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5.4297;5.1172;4.8763;4.3705;4.2369;4.1755;3.9502;3.9082;3.8965;3.8678 +;-;-;-;-;-;-;-;-;- + 2585 1 1.302 177336.7 1.0 10153 4899 15047 HBL1_DMSO_200M_050219_2,15054 HBL1_DMSO_200M_050219_2,15054,RFIPYTEEF True True RFIPYTEEF 79.209427 601.298022449017 3413605.75 15047.0 nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP;;ENSG00000107651|ENST00000369075|SEC23IP 7.07374636332194 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15055 79.221 641.0 264360.0 25 0 38766.0 + 23085 LSLVKNGYIMK 11 165 633.3691586956885 1264.723764458177 2 633.3680297732353 MULTI CID FTMS 0 0 0 15047 303409.5625 0.1508081888651494 12 -1.3290863037109375 8 Unmodified _LSLVKNGYIMK_ REV__ENST00000556400.5_1_14:58740675-58764756:-|nuORF 8.155526934196011 0.8366696279279818 4 [{I|L}V]TGM 5 -1 14.018 0.0 0.0 1.1084 0.0 0.0 0.0 760.4416349017894 760.4416349017894 4.264097905431017 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.7742275032520141 0.0 [{I|L}V]TGM 1.1084 - 965 1 1.302 131684.4 1.0 10154 4899 15047 HBL1_DMSO_200M_050219_2,15055 HBL1_DMSO_200M_050219_2,15055,LSLVKNGYIMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15056 79.226 301.0 152360.0 25 0 37028.0 + 19283 LEKQVILQPMK 11 66 663.8958604693329 0 663.8963500857353 PEAK CID FTMS 0 0 0 15047 240946.921875 0.6344097554088105 -3 0.2574920654296875 9 Unmodified _LEKQVILQPMK_ REV__ENSG00000099715|ENST00000698851|PCDH11Y;REV__ENSG00000102290|ENST00000682573|PCDH11X;REV__ENST00000361724.3_1_X:91090458-91134302:+|nuORF;REV__nc|ENSG00000099715|Q9BZA8-2|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8-4|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8|PCDH11Y;REV__nc|ENSG00000102290|Q9BZA7-2|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-3|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-4|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-6|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-8|PCDH11X 1.0714618166137932 0.4761840153648598 4 C(Carbamidomethyl (C)) 1 -1 2.7642 0.0 0.0 0.2085 0.0 0.0 1033.6724144427687 129.05613123111564 1162.7285456738844 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.2085 - 1 + 1 1.302 49629.5 1.0 10155 4899 15047 HBL1_DMSO_200M_050219_2,15056 HBL1_DMSO_200M_050219_2,15056,LEKQVILQPMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15057 79.238 708.0 272140.0 25 0 11287.0 + 31184 RLPPDTLLQQV 11 151 640.372048569612 1278.729544206024 2 640.3735839724541 MULTI CID FTMS 0 0 0 15047 247033.6875 0.6763044012224178 5 -0.5967788696289062 10 Unmodified _RLPPDTLLQQV_ ENSG00000169733|ENST00000310496|RFNG;ENST00000580953.5_1_17:80006604-80007747:-|nuORF;ENST00000582478.5_1_17:80006905-80007747:-|nuORF 42.83518252547288 0.1687213420692654 4 V{I|L}EG{I|L}{I|L}{I|L}QQV 10 5 66.22 0.0 0.0 5.1786 0.0 0.0 168.09034926582189 0.0 168.09034926582189 0.0 44.50884753112443 0.0 0.0 0 0.5649093276264391 0.0 0.6861818737241735 0.0 V{I|L}EG{I|L}{I|L}{I|L}QQV 5.1786 - 1432 1 1.302 150964.4 1.0 10156 4899 15047 HBL1_DMSO_200M_050219_2,15057 HBL1_DMSO_200M_050219_2,15057,RLPPDTLLQQV False True RLPPDTLLQQV 79.238427 640.373583972454 5714547.0 15047.0 ENST00000582478.5_1_17:80006905-80007747:-|nuORF;;ENST00000580953.5_1_17:80006604-80007747:-|nuORF;;ENSG00000169733|ENST00000310496|RFNG 6.950263659159343 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15058 79.246 337.0 283870.0 25 0 30112.0 12202 GQSGLLVNI 9 127 450.7606738314951 899.5067947297902 2 450.7610656619072 MULTI CID FTMS 0 0 0 15047 240449.1875 1.0 0 0.0 11 Unmodified _GQSGLLVNI_ ENST00000544643.5_1_16:30772733-30773129:-|nuORF 32.30548876998284 0.1201446275138228 4 PP{I|L} 3 8 23.188 0.0 0.0 2.5778 0.0 0.0 574.3059453045579 0.0 574.3059453045579 0.0 3.0938152479371723 0.0 0.0 0 0.0 0.0 0.0 0.0 PP{I|L} 2.5778 - 401 + 1 1.302 77310.5 1.0 10157 4899 15047 HBL1_DMSO_200M_050219_2,15058 HBL1_DMSO_200M_050219_2,15058,GQSGLLVNI True True AAVNSLVNL 79.245992 450.761065661907 1675100.875 15047.0 ENSG00000087086|ENST00000331825|FTL -0.4515971938769023 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15059 79.26 800.0 281280.0 25 0 50763.0 + 16348 IYMERAEDLPL 11 144 675.3414666206231 1348.6683803080462 2 675.3436157107353 MULTI CID FTMS 0 0 0 15047 209727.875 0.7609867428973409 -1 0.0346832275390625 12 Unmodified _IYMERAEDLPL_ ENSG00000139641|ENST00000394048|ESYT1;nc|ENSG00000139641|Q9BSJ8-2|ESYT1 73.1962812333195 0.0231417158388345 4 {I|L}YMER 5 6 45.323 0.0 0.0 3.3605 0.0 0.0 0.0 653.3127535455686 653.3127535455686 2.853261876534603 0.0 0.0 0.0 0 0.7302046884880937 1.5228787452803376 0.2614393726401688 0.0 + {I|L}YMER 3.3605 + + 801 + 1 1.302 164534.8 0.9399999976158142 10158 4899 15047 HBL1_DMSO_200M_050219_2,15059 HBL1_DMSO_200M_050219_2,15059,IYMERAEDLPL True True IYMERAEDLPL 79.259829 675.343615710735 2555538.0 15047.0 ENSG00000139641|ENST00000394048|ESYT1;;nc|ENSG00000139641|Q9BSJ8-2|ESYT1 6.688470045725505 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15060 79.265 273.0 299580.0 25 0 17853.0 + 30636 RFPNFTNQL 9 138 568.2978247350383 1134.5810965368764 2 568.2999145388603 MULTI CID FTMS 0 0 0 15047 215182.484375 0.0752199245467364 -7 0.6630401611328125 13 Unmodified _RFNLNDPFL_ ENSG00000168538|ENST00000334690|TRAPPC11 14.838274106304384 0.4350285940865338 4 [{I|L}T]WN{M(Oxidation (M))|F}TNQ 8 8 27.171 0.0 0.0 2.3948 0.0 0.0 0.0 127.0774093633014 127.0774093633014 6.487736534015863 0.0 0.0 0.0 0 0.1435078169319297 0.9208187539523752 0.6307196863200843 0.0 [{I|L}T]WN{M(Oxidation (M))|F}TNQ 2.3948 - 751 1 1.302 65150.9 1.0 10159 4899 15047 HBL1_DMSO_200M_050219_2,15060 HBL1_DMSO_200M_050219_2,15060,RFNLNDPFL False False RFPNFTNQL 79.264877 568.29991453886 56687696.0 15047.0 ENSG00000168538|ENST00000334690|TRAPPC11 2.493785997231801 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15061 79.267 88.0 955390.0 25 0 113310.0 15021 ILSTFLLIGWV 11 74 421.2556697467544 1260.7451798404632 3 421.2560912966728 MULTI CID FTMS 0 0 0 15047 202917.828125 0.1561443717025311 -1 0.0346832275390625 14 Unmodified _ILSTFLLIGWV_ ENSG00000178607|ENST00000433197|ERN1 22.736283301280096 0.5583477779825423 4 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 7 + 109.26 0.0 0.0 8.6666 8.6666 92.225 0.0 0.0 0.0 88.88455545731246 20.656505091918035 20.656505091918035 9.164539485499262 0 0.6747425010840047 2.0 0.0 0.5629529932484498 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR 8.6666;7.9397 -;- 174 + 1 1.302 77612.7 1.0 10160 4899 15047 HBL1_DMSO_200M_050219_2,15061 HBL1_DMSO_200M_050219_2,15061,ILSTFLLIGWV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15062 79.273 271.0 119460.0 25 0 18275.0 + 37564 TLIEKREKHSL 11 75 677.3950612702711 1352.775569607342 2 677.3955566287041 MULTI CID FTMS 0 0 0 15047 148327.3125 0.2969217060746141 6 -0.6951522827148438 15 Unmodified _TLIEKREKHSL_ REV__ENSG00000196169|ENST00000389916|KIF19 3.2813086475875832 0.8596665074481906 4 [MT]{I|L} 3 -1 21.427 0.0 0.0 1.5839 0.0 0.0 0.0 1004.5795301388451 1004.5795301388451 8.662465192398408 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [MT]{I|L} 1.5839 - 43 1 1.302 34816.5 1.0 10161 4899 15047 HBL1_DMSO_200M_050219_2,15062 HBL1_DMSO_200M_050219_2,15062,TLIEKREKHSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15063 79.282 524.0 280300.0 25 0 20150.0 + 25048 MPTPLVPSV 9 134 470.7621253297131 939.5096977262262 2 470.7625305056572 MULTI CID FTMS 0 0 0 15047 147596.046875 0.657858286047458 1 -0.1752090454101562 16 Unmodified _MPTPLVPSV_ ENSG00000198399|ENST00000355123|ITSN2;nc|ENSG00000198399|Q9NZM3-2|ITSN2;nc|ENSG00000198399|Q9NZM3-3|ITSN2;nc|ENSG00000198399|Q9NZM3-4|ITSN2 42.09456458481378 0.0639583784996157 4 [{I|L}P]M[TP]V 6 5 32.765 0.0 0.0 3.4874 0.0 0.0 0.0 298.1404099667138 298.1404099667138 11.293709283484077 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3494850021680094 0.0 [{I|L}P]M[TP]V 3.4874 - 561 1 1.302 115387.2 1.0 10162 4899 15047 HBL1_DMSO_200M_050219_2,15063 HBL1_DMSO_200M_050219_2,15063,MPTPLVPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15064 79.296 800.0 98095.0 25 0 8074.7 -1 0 99 745.0268079352653 2232.058594405996 3 745.0299560427666 MULTI CID FTMS 0 0 0 15047 137173.5625 1.0 0 0.0 17 4 [QP]SVR{[CA]|SS}{I|L}{I|L}{I|L}N 11 -1 56.929 0.0 0.0 2.5505 0.0 0.0 0.0 1034.3971880864658 1034.3971880864658 42.15282626987115 0.0 0.0 0.0 0 1.25 0.0 1.3494850021680094 0.0 [QP]SVR{[CA]|SS}{I|L}{I|L}{I|L}N 2.5505 - 1122 1 1.302 65385.0 0.8299999833106995 10163 4899 15047 HBL1_DMSO_200M_050219_2,15064 HBL1_DMSO_200M_050219_2,15064, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15065 79.31 800.0 29832.0 25 0 2455.6 -1 0 55 759.6788829431006 2276.0148194295016 3 760.0122558474541 MULTI CID FTMS 0 0 0 15047 144441.578125 0.698633961282533 2 -0.3027191162109375 18 4 M 1 -1 6.9897 0.0 0.0 0.3071 0.0 0.0 483.20808626700574 1658.7326143854127 2141.9407006524184 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.3071 - 11 + 1 1.302 32640.9 0.8299999833106995 10164 4899 15047 HBL1_DMSO_200M_050219_2,15065 HBL1_DMSO_200M_050219_2,15065, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15066 79.325 800.0 72370.0 25 0 9938.2 + 1041 AGFAAGVL 8 114 705.3925929124345 704.3853164458344 1 705.3902465701103 MULTI CID FTMS 0 0 0 15047 109409.21875 0.4283522070520814 3 -0.3614044189453125 19 Unmodified _AGFAAGVL_ REV__ENSG00000119711|ENST00000553458|ALDH6A1;REV__nc|ENSG00000119711|Q02252-2|ALDH6A1 11.114462752807354 0.7467182956244686 4 {NN|[MP]|[D{I|L}]|[EV]}TM{I|L}{I|L} 6 -1 + 38.36 0.0 0.0 5.4458 5.4458 69.801 0.0 0.0 0.0 0.0982988653968988 16.197887582883933 0.0982988653968988 0.0982988653968988 0 0.4611659906337345 1.3979400086720375 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}TM{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}QN{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}A{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}GAN{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AN{I|L}{I|L};{[TV]|[{I|L}S]}EM{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}GNA{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NA{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}QGG{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AGG{I|L}{I|L} 5.4458;5.4319;5.2294;5.2244;5.117;4.8327;4.6595;4.5521;4.0945;3.7797 -;-;-;-;-;-;-;-;-;- 206 1 1.302 48396.2 0.7900000214576721 10165 4899 15047 HBL1_DMSO_200M_050219_2,15066 HBL1_DMSO_200M_050219_2,15066,AGFAAGVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15067 79.339 800.0 151390.0 25 0 22073.0 -1 0 97 1045.4499500995346 3133.328020898804 3 1045.780810534954 MULTI CID FTMS 0 0 0 15047 114642.421875 0.6327892138599106 -1 0.0346832275390625 20 4 {M(Oxidation (M))|F}AMVEV 6 -1 17.815 0.0 0.0 0.56858 0.0 0.0 1987.746903145668 466.2320040338501 2453.978907179518 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 {M(Oxidation (M))|F}AMVEV 0.56858 - 2528 + 1 1.302 92294.5 0.8399999737739563 10166 4899 15047 HBL1_DMSO_200M_050219_2,15067 HBL1_DMSO_200M_050219_2,15067, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15069 79.343 5.5 6185500.0 25 0 388210.0 + 32483 SALCLRWGTL 10 65 560.3015854213894 1118.5886179095787 2 560.3019897341728 MULTI CID FTMS 0 0 0 15068 11652326.0 0.086034961290962 -4 0.4327011108398437 1 Unmodified _SALCLRWGTL_ REV__ENST00000315266.9_1_14:67648077-67648284:+|nuORF 6.2057823575117 0.6979311171683138 4 T{I|L}VM 4 -1 23.928 0.0 0.0 2.1391 0.0 0.0 334.1729207433662 337.15253626041255 671.3254570037788 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 T{I|L}VM 2.1391 - 79 + 1 1.295 32393.4 1.0 10167 4900 15068 HBL1_DMSO_200M_050219_2,15069 HBL1_DMSO_200M_050219_2,15069,SALCLRWGTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15070 79.344 13.0 3898700.0 25 0 473460.0 + 3979 DALQYLQKV 9 78 539.3006855291252 1076.5868181250505 2 539.3009521365166 MULTI CID FTMS 0 0 0 15068 4843530.0 1.0 0 0.0 2 Unmodified _DALQYLQKV_ ENSG00000181404|ENST00000696149|WASHC1;ENST00000400706.3_1_12:78799-87272:+|nuORF;ENST00000557932.5_1_15:102506277-102513446:+|nuORF;ENST00000558686.5_1_15:102506217-102512799:+|nuORF;ENST00000559163.6_1_15:102506277-102512065:+|nuORF;ENST00000559884.5_1_15:102506277-102506794:+|nuORF;nc|ENSG00000185596|C4AMC7|WASH3P;nc|ENSG00000291134|Q6VEQ5|WASH2P 69.10491478415734 0.0214449631113747 4 {[DA]|[EG]}{I|L}QY{I|L}QKV 9 0 + 81.914 0.0 0.0 7.6087 7.6087 91.051 0.0 0.0 0.0 61.96185673204745 12.228860487554895 12.228860487554895 9.208187539523747 0 1.924742501084005 1.6989700043360187 0.0 1.2134679910804405 + + {[DA]|[EG]}{I|L}QY{I|L}QKV;{[DA]|[EG]}{I|L}QY{I|L}[AG]KV;{[DA]|[EG]}{I|L}[AG]Y{I|L}QKV;{[DA]|[EG]}{I|L}[AG]Y{I|L}[AG]KV;W{I|L}Q[RH]Q[{I|L}P];W{I|L}Q[RH][AG][{I|L}P];W{I|L}[AG][RH]Q[{I|L}P] 7.6087;6.7534;6.7534;5.9021;3.7323;2.872;2.872 +;-;-;-;-;-;- + 264 + 1 1.295 45008.0 1.0 10168 4900 15068 HBL1_DMSO_200M_050219_2,15070 HBL1_DMSO_200M_050219_2,15070,DALQYLQKV True True DALQYLQKV 79.344266 539.300952136517 39690796.0 15068.0 ENST00000400706.3_1_12:78799-87272:+|nuORF;;ENST00000559163.6_1_15:102506277-102512065:+|nuORF;;ENST00000558686.5_1_15:102506217-102512799:+|nuORF;;ENSG00000181404|ENST00000696149|WASHC1;;nc|ENSG00000185596|C4AMC7|WASH3P;;ENST00000559884.5_1_15:102506277-102506794:+|nuORF;;nc|ENSG00000291134|Q6VEQ5|WASH2P;;ENST00000557932.5_1_15:102506277-102513446:+|nuORF 9.205711364746094 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15071 79.346 46.0 692260.0 25 0 177840.0 + 30930 RKFIYRAVWA 10 53 655.3824352675513 1308.7503176019025 2 655.3826782107353 MULTI CID FTMS 0 0 0 15068 1396791.75 0.9007660232247846 -1 0.1752090454101562 3 Unmodified _RKFIYRAVWA_ REV__ENSG00000111684|ENST00000261407|LPCAT3;REV__nc|ENSG00000111684|Q6P1A2-2|LPCAT3 0.4583401331227399 0.7245164002484112 4 N 1 -1 0.48455 0.0 0.0 0.037024 0.0 0.0 1100.6678418712368 91.01981531314686 1191.6876571843836 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.037024 - 2 + 1 1.295 37825.3 1.0 10169 4900 15068 HBL1_DMSO_200M_050219_2,15071 HBL1_DMSO_200M_050219_2,15071,RKFIYRAVWA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15072 79.347 38.0 1644900.0 25 0 200780.0 + 2815 ATYVFLHTV 9 83 525.7839540231524 1049.5533551131048 2 525.7848388552666 MULTI CID FTMS 0 0 0 15068 1384072.5 0.3826665818798617 -1 0.1752090454101562 4 Unmodified _ATYVFLHTV_ ENSG00000123353|ENST00000243045|ORMDL2 81.61307344734483 0.0171259190214613 4 [TA]YV{M(Oxidation (M))|F}{I|L}HS{I|L} 9 2 + 78.63 0.0 0.0 7.4917 7.4917 95.417 0.0 0.0 0.0 45.42880081964648 27.369252302197893 27.369252302197893 33.50833760139686 0 0.7059771852360797 1.6989700043360187 2.1549471895720984 0.0 [TA]YV{M(Oxidation (M))|F}{I|L}HS{I|L};[TA][{M(Oxidation (M))|F}V]Y{I|L}HS{I|L};[YV][HV]VVY[TA];[YV][HV]VYV[TA];[YV]{M(Oxidation (M))|F}[H{I|L}]TV[TA];[HT]V{I|L}{M(Oxidation (M))|F}VY[TA];[HT]V{I|L}{M(Oxidation (M))|F}YV[TA];[H{I|L}]S{I|L}{M(Oxidation (M))|F}VY[TA];[H{I|L}]S{I|L}{M(Oxidation (M))|F}YV[TA];[HT]{I|L}V{M(Oxidation (M))|F}VY[TA] 7.4917;4.2991;2.6269;2.6269;2.4591;2.102;2.102;2.0097;2.0097;1.8906 -;-;-;-;-;-;-;-;-;- 416 + 1 1.295 54788.0 1.0 10170 4900 15068 HBL1_DMSO_200M_050219_2,15072 HBL1_DMSO_200M_050219_2,15072,ATYVFLHTV True True ATYVFLHTV 79.346718 525.784838855267 52839420.0 15068.0 ENSG00000123353|ENST00000243045|ORMDL2 7.410362402598063 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15073 79.348 35.0 1427600.0 25 0 186040.0 + 1284 AIQDKLFQV 9 97 531.3029520904628 1060.5913512477257 2 531.3022338747978 MULTI CID FTMS 0 0 0 15068 1162476.625 0.8021044366150961 9 -0.9332351684570312 5 Unmodified _AIQDKLFQV_ ENSG00000159685|ENST00000290913|CHCHD6;ENST00000514908.5_1_3:126423131-126653948:+|nuORF 43.85829265575387 0.0542763391141878 4 [{I|L}A]QYR 5 6 38.288 0.0 0.0 3.6101 0.0 0.0 0.0 426.2087801568969 426.2087801568969 7.327796776480469 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.5 [{I|L}A]QYR 3.6101 - 437 + 1 1.295 47618.8 1.0 10171 4900 15068 HBL1_DMSO_200M_050219_2,15073 HBL1_DMSO_200M_050219_2,15073,AIQDKLFQV True True AIQDKLFQV 79.347897 531.302233874798 7993714.5 15068.0 ENST00000514908.5_1_3:126423131-126653948:+|nuORF;;ENSG00000159685|ENST00000290913|CHCHD6 5.343619664510091 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15074 79.349 37.0 1647300.0 25 0 259080.0 + 39032 TVTITGIVKV 10 88 515.8289592471443 1029.6433655610886 2 515.8298217654228 MULTI CID FTMS 0 0 0 15068 1029968.25 0.6500208857202023 -1 0.1752090454101562 6 Unmodified _TVTITGIVKV_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 34.93206674587334 0.2110832994570416 4 {[TV]|[{I|L}S]}T{I|L}T{[VA]|[{I|L}G]}VKV 10 0 + 55.933 0.0 0.0 5.4322 5.4322 88.626 0.0 0.0 0.0 24.32854207065561 5.971742247263535 5.971742247263535 55.93250477594724 0 0.9247425010840048 2.0 0.0 0.2614393726401688 + + {[TV]|[{I|L}S]}T{I|L}T{[VA]|[{I|L}G]}VKV 5.4322 + + 275 + 1 1.295 51387.2 1.0 10172 4900 15068 HBL1_DMSO_200M_050219_2,15074 HBL1_DMSO_200M_050219_2,15074,TVTITGIVKV False True TVTITGIVKV 79.349076 515.829821765423 28358638.0 15068.0 ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;nc|ENSG00000125885|Q9UJA3-2|MCM8 4.805783987045288 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15075 79.351 64.0 937230.0 25 0 119200.0 + + 34343 KAIDVVVMV 9 86 487.2902572083949 972.5659614835896 2 487.2913696169853 MULTI CID FTMS 0 0 0 15068 931470.375 0.8495271134540099 -1 0.1752090454101562 7 Unmodified _SLSPLKVMV_ ENSG00000204104|ENST00000373327|TRAF3IP1;nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1 37.97399986684836 0.0865783450051559 4 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}VVV{[ET]|[MV]} 9 -1 + 52.526 0.0 0.0 5.4008 5.4008 81.631 0.0 0.0 0.0 12.56044340753462 35.642040441009044 12.56044340753462 8.495302317543647 0 0.5 2.0 1.2174165578762486 0.0 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}VVV{[ET]|[MV]};{[TV]|[{I|L}S]}[TP]KVV{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}[KA]VVV{[ET]|[MV]};{[TV]|[{I|L}S]}[PS]{I|L}KV{[ET]|[MV]};{[TV]|[{I|L}S]}[TP]VKV{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}KVV{[ET]|[MV]};{[QN]|[E{I|L}]|[KN]}[KG]VVV{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}VVAKV{[ET]|[MV]};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}A]{I|L}{[ET]|[MV]};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]KV{[ET]|[MV]} 5.4008;4.5273;3.9535;3.8525;3.7023;3.08;3.0756;2.9475;2.4945;2.4579 -;-;-;+;-;-;-;-;-;- + 261 1 1.295 51168.3 1.0 10173 4900 15068 HBL1_DMSO_200M_050219_2,15075 HBL1_DMSO_200M_050219_2,15075,SLSPLKVMV False False KAIDVVVMV 79.350626 487.291369616985 21098810.0 15068.0 ENSG00000204104|ENST00000373327|TRAF3IP1;;nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1 4.249510665734609 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15076 79.353 123.0 503570.0 25 0 33297.0 + 18001 KSADEVLFTGV 11 95 583.3077639461715 1164.6009749591428 2 583.3090698122978 MULTI CID FTMS 0 0 0 15068 796463.75 0.8760925702951227 1 -0.1275100708007812 8 Unmodified _KSADEVLFTGV_ ENSG00000089006|ENST00000377759|SNX5;ENST00000490175.5_1_20:17923003-17949420:-|nuORF 40.72490554402381 0.2012291192650359 4 [{M(Oxidation (M))|F}T]R[QP]{I|L}{M(Oxidation (M))|F}TGV 10 6 + 63.522 0.0 0.0 5.4544 5.4544 74.226 0.0 0.0 0.0 2.2969624387961574 37.57999250452839 2.2969624387961574 2.399415448055734 0 1.325257498915995 0.0 0.9634679910804403 0.0 [{M(Oxidation (M))|F}T]R[QP]{I|L}{M(Oxidation (M))|F}TGV;{[DA]|[EG]}[KS]{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}TGV;[VG]M[WR]{I|L}{M(Oxidation (M))|F}TGV;{[WT]|[RM]}[WR]{I|L}{M(Oxidation (M))|F}TGV;[{M(Oxidation (M))|F}T][VG][QP]{I|L}{M(Oxidation (M))|F}TGV;[{M(Oxidation (M))|F}T]R{I|L}[QP]{M(Oxidation (M))|F}TGV;{[ET]|[MV]}G[WR]{I|L}{M(Oxidation (M))|F}TGV;[KT][DG]{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}TGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[SG][QP]{I|L}{M(Oxidation (M))|F}TGV;[{M(Oxidation (M))|F}T][VG]{I|L}[QP]{M(Oxidation (M))|F}TGV 5.4544;5.2484;5.2273;4.7136;4.6675;4.5749;4.5488;4.0538;3.935;3.788 -;-;-;-;-;-;-;-;-;- 555 1 1.295 54837.5 1.0 10174 4900 15068 HBL1_DMSO_200M_050219_2,15076 HBL1_DMSO_200M_050219_2,15076,KSADEVLFTGV False True KSADEVLFTGV 79.353174 583.309069812298 8790593.0 15068.0 ENST00000490175.5_1_20:17923003-17949420:-|nuORF;;ENSG00000089006|ENST00000377759|SNX5 6.772067387898763 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15077 79.355 64.0 913500.0 25 0 64228.0 40652 VLDTNIQLK 9 101 522.3084088187297 1042.6022647042594 2 522.3093139529228 MULTI CID FTMS 0 0 0 15068 730069.75 1.0 0 0.0 9 Unmodified _VLDTNIQLK_ ENSG00000164088|ENST00000323588|PPM1M;ENST00000482724.1_1_3:52282581-52283827:+|nuORF;ENST00000489606.5_1_3:52282326-52283827:+|nuORF;nc|ENSG00000164088|Q96MI6-1|PPM1M;nc|ENSG00000164088|Q96MI6-3|PPM1M;nc|ENSG00000164088|Q96MI6-4|PPM1M 18.13498045792455 0.3457906370836843 4 {[QN]|[E{I|L}]|[KN]}VDT{I|L}{I|L}K{I|L} 9 5 + 49.121 0.0 0.0 4.7114 4.7114 85.481 0.0 0.0 0.0 18.65865011156764 10.597718523607966 10.597718523607966 49.121309463259166 0 0.75 0.0 0.4247425010840047 0.2302046884880938 {[QN]|[E{I|L}]|[KN]}VDT{I|L}{I|L}K{I|L} 4.7114 - 262 + 1 1.295 52180.6 1.0 10175 4900 15068 HBL1_DMSO_200M_050219_2,15077 HBL1_DMSO_200M_050219_2,15077,VLDTNIQLK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15078 79.357 115.0 686880.0 25 0 71146.0 + 25355 NAPQIITI 8 107 435.2584891262553 868.5024253193106 2 435.2584106326103 MULTI CID FTMS 0 0 0 15068 689442.5 0.8824799755457781 1 -0.1275100708007812 10 Unmodified _NAPQIITI_ ENSG00000166348|ENST00000687698|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;nc|ENSG00000166348|Q70EL1-4|USP54;nc|ENSG00000166348|Q70EL1-6|USP54 38.15118350030904 0.2652218139009398 4 {[QG]|[NA]}PQ{I|L}{I|L}T{I|L} 8 0 {[QG]|[NA]}PQ{I|L}{I|L} + + 21.211 26.758 4.2049 2.4423 2.4423 45.027 0.0 0.0 0.0 0.0 -12.536470188226517 -12.536470188226517 0.0 0 0.0 0.0 0.3252574989159953 0.0 + + {[QG]|[NA]}PQ{I|L}{I|L}T{I|L} 2.4423 + + 95 + 1 1.295 68166.1 1.0 10176 4900 15068 HBL1_DMSO_200M_050219_2,15078 HBL1_DMSO_200M_050219_2,15078,NAPQIITI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15079 79.367 584.0 571950.0 25 0 33868.0 + -1 LAYLAYETV 9 111 1042.5467827341652 0 1042.546069324017 PEAK CID FTMS 0 0 0 15068 359408.59375 1.0 0 0.0 11 ENSG00000196284|ENST00000371459|SUPT3H;nc|ENSG00000196284|O75486-4|SUPT3H 4 VTEY{I|L}A{I|L} 7 -1 45.693 0.0 0.0 2.1936 0.0 0.0 1059.5459848526214 231.0781191461547 1290.624103998776 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1237125054200234 0.0 VTEY{I|L}A{I|L} 2.1936 - 10678 + 1 1.295 211635.7 1.0 10177 4900 15068 HBL1_DMSO_200M_050219_2,15079 HBL1_DMSO_200M_050219_2,15079, False False LAYLAYETV 79.367397 1042.54606932402 3621416.75 15068.0 ENSG00000196284|ENST00000371459|SUPT3H;;nc|ENSG00000196284|O75486-4|SUPT3H 5.063023567199707 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15080 79.373 307.0 406040.0 25 0 41736.0 + 949 AFLEAADNL 9 136 482.2424302288952 962.4703075245905 2 482.2426025271416 MULTI CID FTMS 0 0 0 15068 297560.46875 0.4998065742702312 -1 0.1752090454101562 12 Unmodified _AFLEAADNL_ ENSG00000173113|ENST00000544844|TRMT112 36.04419817259434 0.0971720506436186 4 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}AA 6 6 33.901 0.0 0.0 3.5223 0.0 0.0 0.0 357.139838124453 357.139838124453 16.013377950061624 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}AA 3.5223 - 709 1 1.295 97806.4 1.0 10178 4900 15068 HBL1_DMSO_200M_050219_2,15080 HBL1_DMSO_200M_050219_2,15080,AFLEAADNL True True AFLEAADNL 79.372989 482.242602527142 3830550.0 15068.0 ENSG00000173113|ENST00000544844|TRMT112 4.539921283721924 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15081 79.376 175.0 310160.0 25 0 47997.0 + 20642 LLPSHPLEL 9 88 509.8013031582373 1017.5880533832748 2 509.8013793826103 MULTI CID FTMS 0 0 0 15068 256472.6875 0.7356265731092864 2 -0.1861953735351562 13 Unmodified _LLPSHPLEL_ ENSG00000132963|ENST00000380842|POMP 30.22481116460888 0.1466181017706357 4 {I|L}{I|L}{[DS]|[MA]|[CV]|TT}H 5 5 27.231 0.0 0.0 2.676 0.0 0.0 0.0 449.2322481744751 449.2322481744751 8.519374645445623 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}{[DS]|[MA]|[CV]|TT}H 2.676 - 67 + 1 1.295 50250.5 1.0 10179 4900 15068 HBL1_DMSO_200M_050219_2,15081 HBL1_DMSO_200M_050219_2,15081,LLPSHPLEL False True LLPSHPLEL 79.376387 509.80137938261 5591385.5 15068.0 ENSG00000132963|ENST00000380842|POMP 4.063756148020427 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15082 79.389 711.0 402720.0 25 0 47861.0 43054 VYHSSFHRY 9 159 598.2860724372168 1194.5575919412336 2 598.2857543826103 MULTI CID FTMS 0 0 0 15068 215066.546875 0.7179002054040533 -1 0.1752090454101562 14 Unmodified _VYHSSFHRY_ ENST00000278612.8_1_11:108058836-108062880:-|nuORF;ENST00000610253.5_1_11:108058836-108093299:-|nuORF 30.63653989081413 0.1413794767160703 4 VYPEPAA{[SA]|[TG]}QY 11 8 + 79.976 0.0 0.0 6.695 6.695 81.628 0.0 0.0 0.0 33.8115491017029 10.23220524894444 10.23220524894444 3.703231139364334 0 1.1989700043360187 2.0 0.5387254899964358 1.110924374808178 VYPEPAA{[SA]|[TG]}QY;VYPQ[YT]YVY;VYPE[KC]SPC(Carbamidomethyl (C)){I|L};VYPQ[MT]SPC(Carbamidomethyl (C)){I|L};VYPQ[YV][YT]Y;VYPE[KC]SP[CG]{I|L};VYPE[KC]S{[WS]|[C(Carbamidomethyl (C)){I|L}]}P;VYPEYN{[QD]|[EN]|[WG]|[KD]|[RS]}AP;VYPQ[YT]YYV;VYPEPAAQ[HS]P 6.695;6.385;5.8385;5.7172;5.7126;5.0713;5.0676;5.0287;4.9942;4.9689 -;-;-;-;-;-;-;-;-;- 3794 + 1 1.295 213279.6 1.0 10180 4900 15068 HBL1_DMSO_200M_050219_2,15082 HBL1_DMSO_200M_050219_2,15082,VYHSSFHRY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15083 79.395 364.0 328980.0 25 0 36485.0 35302 SSRDQPLP 8 135 450.234321178822 898.4540894244441 2 450.2345153689384 MULTI CID FTMS 0 0 0 15068 208690.65625 0.3678924642020925 -5 0.5617599487304688 15 Unmodified _SSRDQPLP_ ENST00000555222.5_1_12:57490357-57492756:-|nuORF 24.67388899826682 0.525179942228231 4 PP{I|L} 3 6 24.922 0.0 0.0 2.7738 0.0 0.0 573.2530746956849 0.0 573.2530746956849 0.0 11.49288766643714 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 PP{I|L} 2.7738 - 427 + 1 1.295 94485.8 1.0 10181 4900 15068 HBL1_DMSO_200M_050219_2,15083 HBL1_DMSO_200M_050219_2,15083,SSRDQPLP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15084 79.408 751.0 128000.0 25 0 5897.5 -1 0 121 763.7219833045623 2288.1441205138867 3 763.7249023318291 MULTI CID FTMS 0 0 0 15068 191752.671875 1.0 0 0.0 16 4 {[TV]|[{I|L}S]}VA{M(Oxidation (M))|F}{[YC]|[HE]}NSNT{I|L} 12 -1 51.434 0.0 0.0 2.2479 0.0 0.0 0.0 972.4719763090616 972.4719763090616 21.25192609659102 0.0 0.0 0.0 0 1.25 2.0 1.4802046884880935 0.0 {[TV]|[{I|L}S]}VA{M(Oxidation (M))|F}{[YC]|[HE]}NSNT{I|L} 2.2479 - 1907 1 1.295 75960.1 1.0 10182 4900 15068 HBL1_DMSO_200M_050219_2,15084 HBL1_DMSO_200M_050219_2,15084, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15085 79.422 800.0 267270.0 25 0 29572.0 + 2835 AVAGILKQL 9 171 456.7975535817846 0 456.7970458865166 PEAK CID FTMS 0 0 0 15068 182962.203125 1.0 0 0.0 17 Unmodified _AVAGILKQL_ ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;nc|ENSG00000068878|Q14997-3|PSME4 70.71552829651908 0.0164693549707869 4 A{I|L}G{I|L}KST 7 5 28.202 0.0 0.0 3.0938 0.0 0.0 170.1033733639776 68.05147730045155 238.15485066442915 0.0 0.0 0.0 0.0 0 1.4436726795685342 0.0 1.0114393726401687 0.3252574989159953 A{I|L}G{I|L}KST 3.0938 - 1399 + 1 1.295 167839.2 0.8399999737739563 10183 4900 15068 HBL1_DMSO_200M_050219_2,15085 HBL1_DMSO_200M_050219_2,15085,AVAGILKQL True True AVAGILKQL 79.422128 456.797045886517 1244024.125 15068.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4;;nc|ENSG00000068878|Q14997-3|PSME4 3.2588138580322266 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15086 79.437 800.0 180610.0 25 0 14868.0 14678 IIRMDLHL 8 189 337.5310716004214 1009.5713854014642 3 337.5311767458916 MULTI CID FTMS 0 0 0 15068 154610.75 0.2283560962758279 1 -0.1275100708007812 18 Unmodified _IIRMDLHL_ ENSG00000196184|ENST00000423932|OR10J1;nc|ENSG00000196184|P30954|OR10J1 12.240655878213236 0.7300809844188293 4 {I|L}P 2 7 21.417 0.0 0.0 2.1214 0.0 0.0 0.0 796.414500347626 796.414500347626 8.317986737803768 0.0 0.0 0.0 0 0.0467716608392861 0.2365720064370627 0.0 0.0 {I|L}P 2.1214 - 101 + 1 1.295 116222.8 0.7300000190734863 10184 4900 15068 HBL1_DMSO_200M_050219_2,15086 HBL1_DMSO_200M_050219_2,15086,IIRMDLHL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15087 79.451 800.0 335450.0 25 0 35771.0 -1 VYPVRCEWC 9 163 606.2702410527265 0 606.2695800662041 PEAK CID FTMS 0 0 0 15068 156538.5 0.6325715969944075 -2 0.2098922729492187 19 Carbamidomethyl (C) _VYPVRC(Carbamidomethyl (C))EWC_ ENSG00000007384|ENST00000262316|RHBDF1 25.399314129420983 0.152124705672316 4 VPE{[QS]|[NT]}Y 6 -1 29.244 0.0 0.0 2.4158 0.0 0.0 163.06447641515894 341.11542688541255 504.1799033005715 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.7059771852360797 0.7742275032520141 VPE{[QS]|[NT]}Y 2.4158 - 338 + 1 1.295 193112.8 0.9399999976158142 10185 4900 15068 HBL1_DMSO_200M_050219_2,15087 HBL1_DMSO_200M_050219_2,15087,VYPVRCEWC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15088 79.466 800.0 254920.0 25 0 10322.0 + 24337 MEKSCLTL 8 140 924.4534376564046 923.4461611898046 1 924.452197253704 MULTI CID FTMS 0 0 0 15068 140919.875 0.1346921961110365 3 -0.3255844116210937 20 Unmodified _MEKSCLTL_ REV__ENST00000507701.1_1_4:76587113-76598433:-|nuORF 23.1484247019978 0.5573009939494978 4 M{M(Oxidation (M))|F}{I|L}WNT{I|L} 7 -1 + 29.145 0.0 0.0 3.1561 3.1561 68.995 0.0 0.0 0.0 1.6769009059758773 2.496972137925802 1.6769009059758773 3.99166239860314 0 0.1989700043360188 0.0 0.819341519366547 0.0 M{M(Oxidation (M))|F}{I|L}WNT{I|L};DY{I|L}WNT{I|L};MT{I|L}[WC(Carbamidomethyl (C))]T{I|L};[QP]VN{I|L}[PG]{[CP]|[EA]};M{M(Oxidation (M))|F}{I|L}WQS{I|L};MEPK[PS]HV;[QP]VNK[HC]V;[QP]VN[VP]A{[CP]|[EA]};MEPK{I|L}S[YG];[QP]V[HA]{I|L}EM 3.1561;2.7238;2.5458;2.4987;2.4365;2.3938;2.376;2.2156;2.1968;2.079 -;-;-;-;-;-;-;-;-;- 2328 + 1 1.295 134264.2 0.8500000238418579 10186 4900 15068 HBL1_DMSO_200M_050219_2,15088 HBL1_DMSO_200M_050219_2,15088,MEKSCLTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15090 79.471 3.6 14174000.0 25 0 1041100.0 + 43135 VYPEYVIQY 9 70 587.2949481527189 1172.5753433722375 2 587.2953369021416 MULTI CID FTMS 0 0 0 15089 15234297.0 1.0 0 0.0 1 Unmodified _VYPEYVIQY_ ENSG00000059378|ENST00000263549|PARP12 28.486842064014134 0.1687311288560894 4 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{I|L}Q 6 5 27.369 0.0 0.0 2.3341 0.0 0.0 0.0 440.18164155022527 440.18164155022527 7.420299789533402 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{I|L}Q 2.3341 - 355 1 1.291 46446.1 1.0 10187 4901 15089 HBL1_DMSO_200M_050219_2,15090 HBL1_DMSO_200M_050219_2,15090,VYPEYVIQY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15091 79.472 5.7 11286000.0 25 0 1439100.0 + 4348 DASLVFKV 8 88 439.7525915049388 877.4906300766776 2 439.7528564333916 MULTI CID FTMS 0 0 0 15089 10620144.0 1.0 0 0.0 2 Unmodified _DASLVFKV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602816-23603164:-|nuORF 61.357469665136826 0.1155423183535659 4 {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV 8 0 + 74.945 0.0 0.0 8.5409 8.5409 98.407 0.0 0.0 0.0 53.06093158795967 11.638568026386691 11.638568026386691 74.94518152925373 0 1.4489700043360187 2.0 0.0 0.1861818737241735 + + {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV 8.5409 + + 122 + 1 1.291 55598.6 1.0 10188 4901 15089 HBL1_DMSO_200M_050219_2,15091 HBL1_DMSO_200M_050219_2,15091,DASLVFKV True True DASLVFKV 79.471755 439.752856433392 262918272.0 15089.0 ENST00000444025.1_1_7:23602816-23603164:-|nuORF;;ENSG00000164163|ENST00000296577|ABCE1 7.642173290252685 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15092 79.473 9.0 7090200.0 25 0 538140.0 + 31297 RLYPEGLAQL 10 69 580.3271076952326 1158.639662457265 2 580.3275634646416 MULTI CID FTMS 0 0 0 15089 6074186.0 0.8585047563650405 1 -0.058685302734375 3 Unmodified _RLYPEGLAQL_ ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF 23.96415052054722 0.4302674029938662 4 G{I|L}AQ{I|L} 5 5 45.019 0.0 0.0 3.8855 0.0 0.0 658.3433393274944 0.0 658.3433393274944 0.0 34.5609971201948 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 + G{I|L}AQ{I|L} 3.8855 + + 53 1 1.291 53130.7 1.0 10189 4901 15089 HBL1_DMSO_200M_050219_2,15092 HBL1_DMSO_200M_050219_2,15092,RLYPEGLAQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15093 79.474 15.0 4116100.0 25 0 572780.0 20411 LLHPPPLSL 9 93 493.8054435747275 985.5963342162552 2 493.8053161501884 MULTI CID FTMS 0 0 0 15089 3438869.25 1.0 0 0.0 4 Unmodified _LLHPPPLSL_ ENST00000583260.1_1_17:62009328-62009508:-|nuORF 24.67388899826682 0.2172451872415813 4 {I|L}{I|L}VTA[RN]S{I|L} 9 5 + 57.564 0.0 0.0 5.8405 5.8405 76.581 0.0 0.0 0.0 27.147642715192504 2.940094910330366 2.940094910330366 2.940094910330366 0 0.4247425010840047 2.0 0.6203715150305281 0.0 {I|L}{I|L}VTA[RN]S{I|L};{I|L}{I|L}VTAW[KG]V;{I|L}{I|L}VTA[RN]TV 5.8405;5.5422;5.3013 -;-;- 207 + 1 1.291 53607.0 1.0 10190 4901 15089 HBL1_DMSO_200M_050219_2,15093 HBL1_DMSO_200M_050219_2,15093,LLHPPPLSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15094 79.475 15.0 3493700.0 25 0 381930.0 + 44699 YPFQIHSI 8 84 502.7637987500144 0 502.7639343142509 PEAK CID FTMS 0 0 0 15089 3058201.25 1.0 0 0.0 5 Unmodified _YPFQIHSI_ ENSG00000101290|ENST00000460006|CDS2;ENSG00000163624|ENST00000295887|CDS1;ENST00000379070.3_1_20:5157275-5170877:+|nuORF 74.42276476219924 0.0004920351923402 4 P{M(Oxidation (M))|F}Q{I|L}HS 6 2 46.569 0.0 0.0 4.6406 0.0 0.0 163.06275342011048 128.07215295963127 291.1349063797418 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 1.916386562212267 0.0 + P{M(Oxidation (M))|F}Q{I|L}HS 4.6406 + + 295 + 1 1.291 47570.7 1.0 10191 4901 15089 HBL1_DMSO_200M_050219_2,15094 HBL1_DMSO_200M_050219_2,15094,YPFQIHSI True True YPFQIHSI 79.475292 502.763934314251 60416100.0 15089.0 ENSG00000163624|ENST00000295887|CDS1;;ENSG00000101290|ENST00000460006|CDS2;;ENST00000379070.3_1_20:5157275-5170877:+|nuORF 6.779666264851888 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15095 79.476 16.0 3379200.0 25 0 493120.0 + 16247 IVQSELLVL 9 84 507.31577824811217 1012.6170035630244 2 507.3160278201103 MULTI CID FTMS 0 0 0 15089 3021099.25 0.5166879950949603 1 -0.058685302734375 6 Unmodified _IVQSELLVL_ REV__ENSG00000127603|ENST00000564288|MACF1;REV__nc|ENSG00000127603|Q9UPN3-5|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1 32.78568957990786 0.1150597335874693 4 [{I|L}V]NET{I|L}{I|L}V{I|L} 9 -1 + 68.026 0.0 0.0 6.7178 6.7178 83.53 0.0 0.0 0.0 13.005215510555033 28.99719914055148 13.005215510555033 5.013487579716767 0 0.8182503180159344 2.0 1.0 0.0 [{I|L}V]NET{I|L}{I|L}V{I|L};[{I|L}V]NTE{I|L}{I|L}V{I|L};[{I|L}V]NT{I|L}E{I|L}V{I|L};[{I|L}V]GGET{I|L}{I|L}V{I|L};[{I|L}V]GGTE{I|L}{I|L}V{I|L};[{I|L}V]GGT{I|L}E{I|L}V{I|L};[{I|L}V][KA]EE{I|L}V{I|L};[{I|L}V]NT{I|L}[{I|L}V]E{I|L};{[QN]|[E{I|L}]|[KN]}GEK{I|L}{I|L}V{I|L};{[QN]|[E{I|L}]|[KN]}EGK{I|L}{I|L}V{I|L} 6.7178;6.2227;6.1748;5.8085;5.3133;5.2655;4.497;4.1253;3.7538;3.7538 -;-;-;-;-;-;-;-;-;- 843 1 1.291 49677.1 1.0 10192 4901 15089 HBL1_DMSO_200M_050219_2,15095 HBL1_DMSO_200M_050219_2,15095,IVQSELLVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15096 79.478 33.0 1503900.0 25 0 140640.0 + 32053 RVLEELETL 9 65 551.3120156744027 1100.6094784156053 2 551.3120605349541 MULTI CID FTMS 0 0 0 15089 1594318.75 1.0 0 0.0 7 Unmodified _RVLEELETL_ ENSG00000043143|ENST00000681547|JADE2;nc|ENSG00000043143|Q9NQC1-2|JADE2;nc|ENSG00000043143|Q9NQC1-3|JADE2;nc|ENSG00000043143|Q9NQC1|JADE2 36.506200033944 0.094635877243972 4 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}ET{I|L} 9 4 + 62.33 0.0 0.0 5.6632 5.6632 82.41 0.0 0.0 0.0 8.440899702813027 24.643331241078165 8.440899702813027 8.010299956639813 0 0.5 1.6989700043360187 0.9247425010840048 0.0 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}[RV]E{I|L}TE{I|L};[{I|L}T]E[RV]{I|L}EE{I|L};[{I|L}T]EAA{I|L}{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}T[RV]{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}[RV]T{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}TAA{I|L}{I|L}EE{I|L};[{I|L}T]E[HK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L};{[QN]|[E{I|L}]|[KN]}T[HK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{I|L};[{I|L}T][RD]{I|L}{I|L}EE{I|L} 5.6632;4.9354;4.0232;3.9817;3.8632;3.8424;3.8217;3.7544;3.5944;3.3674 -;-;-;-;-;-;-;-;-;- 403 1 1.291 42815.9 1.0 10193 4901 15089 HBL1_DMSO_200M_050219_2,15096 HBL1_DMSO_200M_050219_2,15096,RVLEELETL True True RVLEELETL 79.477649 551.312060534954 10108598.0 15089.0 nc|ENSG00000043143|Q9NQC1-3|JADE2;;nc|ENSG00000043143|Q9NQC1-2|JADE2;;nc|ENSG00000043143|Q9NQC1|JADE2;;ENSG00000043143|ENST00000681547|JADE2 3.8587376276652017 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15097 79.479 60.0 829990.0 25 0 57473.0 + 13630 HPPSHWPLI 9 84 542.2906042372043 1082.5666555412083 2 542.2912475466728 MULTI CID FTMS 0 0 0 15089 725447.5625 0.1232697864644748 8 -0.80572509765625 8 Unmodified _HPPSHWPLI_ ENSG00000168036|ENST00000349496|CTNNB1 77.98433622928108 0.0180125044636492 4 [{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L} 9 5 + 45.167 0.0 0.0 4.1722 4.1722 64.768 0.0 0.0 0.0 0.1926645698125071 6.930268912352403 0.1926645698125071 0.1926645698125071 0 1.048455006504028 1.6989700043360187 0.0 0.0 [{I|L}P][C(Carbamidomethyl (C))H]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]HWP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]WHP{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))H]PPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PHP{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}[{I|L}A]C(Carbamidomethyl (C))H{I|L}{I|L};[WP][HS]PHP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]WPH{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}PPH{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}[{I|L}A][CG]H{I|L}{I|L} 4.1722;4.1544;3.7735;3.4323;3.2709;2.8485;2.7854;2.7331;2.2305;1.9979 -;+;-;-;-;-;-;-;-;- + 440 1 1.291 46118.4 1.0 10194 4901 15089 HBL1_DMSO_200M_050219_2,15097 HBL1_DMSO_200M_050219_2,15097,HPPSHWPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15098 79.483 175.0 465960.0 25 0 43666.0 -1 DMSDQDCCVS 10 101 608.6978140732641 1215.381075213328 2 608.6985351443291 MULTI CID FTMS 0 0 0 15089 663126.8125 0.8219307091840473 -1 0.1275100708007812 9 2 Carbamidomethyl (C) _DMSDQDC(Carbamidomethyl (C))C(Carbamidomethyl (C))VS_ nc|ENSG00000058600|Q9NVU0-2|POLR3E 3.5964929083625545 0.7100006075494749 4 {[QG]|[NA]}WD 4 -1 29.011 0.0 0.0 2.387 0.0 0.0 0.0 726.1716402643186 726.1716402643186 16.53653572046164 0.0 0.0 0.0 0 0.7742275032520141 0.6575773191777937 0.0 0.0 {[QG]|[NA]}WD 2.387 - 97 + 1 1.291 66281.7 1.0 10195 4901 15089 HBL1_DMSO_200M_050219_2,15098 HBL1_DMSO_200M_050219_2,15098,DMSDQDCCVS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 15099 79.485 91.0 737770.0 25 0 93386.0 -1 VPWYLGLMF 9 74 571.2931989249637 1140.5718449167273 2 571.2932006716728 MULTI CID FTMS 0 0 0 15089 667547.5625 0.0695419416372684 -4 0.5089111328125 10 Oxidation (M) _VPWYLGLM(Oxidation (M))F_ ENSG00000075275|ENST00000674500|CELSR1;nc|ENSG00000075275|Q9NYQ6|CELSR1 20.871210003555333 0.2717241269066626 4 VP 2 -1 32.805 0.0 0.0 2.8762 0.0 0.0 0.0 941.4284151666624 941.4284151666624 9.61758134947864 0.0 0.0 0.0 0 0.3252574989159953 1.0969100130080565 0.0 0.0 VP 2.8762 + + 71 + 1 1.291 56906.6 1.0 10196 4901 15089 HBL1_DMSO_200M_050219_2,15099 HBL1_DMSO_200M_050219_2,15099,VPWYLGLMF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15100 79.486 64.0 991250.0 25 0 62952.0 + 44935 YPPWPGKIV 9 106 528.7980860103809 1055.5816190875616 2 528.7977783083916 MULTI CID FTMS 0 0 0 15089 618965.0625 0.0542863903353895 -19 2.0638961791992188 11 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 28.486842064014134 0.1687311288560894 4 YPPAD[KT]V 8 4 54.092 0.0 0.0 5.1244 0.0 0.0 0.0 181.09905420474848 181.09905420474848 36.64442544444192 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.0 0.0 YPPAD[KT]V 5.1244 - 322 + 1 1.291 57698.7 1.0 10197 4901 15089 HBL1_DMSO_200M_050219_2,15100 HBL1_DMSO_200M_050219_2,15100,YPPWPGKIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15101 79.488 103.0 720540.0 25 0 104270.0 -1 RIMILLHSI 9 101 556.3347745225931 1110.654996111986 2 556.3353759646416 MULTI CID FTMS 0 0 0 15089 549481.5 0.0577987800523015 3 -0.2940597534179687 12 Oxidation (M) _RIM(Oxidation (M))ILLHSI_ ENST00000392782.5_3_2:160303483-160304836:-|nuORF 32.30548876998284 0.1201446275138228 4 HP 2 -1 27.432 0.0 0.0 2.4699 0.0 0.0 0.0 873.5207529687527 873.5207529687527 4.691485147346583 0.0 0.0 0.0 0 0.6462566630072955 0.0 0.0 0.0 HP 2.4699 - 209 + 1 1.291 64567.7 1.0 10198 4901 15089 HBL1_DMSO_200M_050219_2,15101 HBL1_DMSO_200M_050219_2,15101,RIMILLHSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15102 79.492 190.0 256650.0 25 0 29692.0 + 16820 KHGPFVLLQKE 11 92 648.3745712922572 1294.7345896513143 2 648.3752929568291 MULTI CID FTMS 0 0 0 15089 505127.4375 1.0 0 0.0 13 Unmodified _KHGPFVLLQKE_ REV__ENSG00000196998|ENST00000376372|WDR45;REV__nc|ENSG00000196998|Q9Y484-2|WDR45;REV__nc|ENSG00000196998|Q9Y484-3|WDR45 6.630372943996041 0.8438654038452725 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q 3 -1 18.451 0.0 0.0 1.425 0.0 0.0 0.0 919.5324466671924 919.5324466671924 7.854640163102985 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q 1.425 - 126 1 1.291 45273.6 1.0 10199 4901 15089 HBL1_DMSO_200M_050219_2,15102 HBL1_DMSO_200M_050219_2,15102,KHGPFVLLQKE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15103 79.495 172.0 448620.0 25 0 73303.0 + 12649 GVLDTLTKV 9 111 473.2844723062626 944.5543916793252 2 473.2846557497978 MULTI CID FTMS 0 0 0 15089 471234.90625 0.2186405602249344 2 -0.1980743408203125 14 Unmodified _GVLDTLTKV_ ENSG00000214114|ENST00000397572|MYCBP;ENST00000495043.5_1_1:39330344-39338774:-|nuORF 47.74868867922204 0.0453060283459952 4 [VG]{I|L}DT[{I|L}T]KV 9 0 + 62.202 0.0 0.0 6.5853 6.5853 92.455 0.0 0.0 0.0 19.44735070737593 7.280156171532184 7.280156171532184 31.787887749990333 0 1.048455006504028 2.0 0.7614393726401688 0.0 + + [VG]{I|L}DT[{I|L}T]KV;[VG]{I|L}[TA]{[WT]|[RM]}VV;[VG]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[RV]VV;[VG][VS]V{[WT]|[RM]}VV;R[VS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PKV;[VG][VS]M[RV]VV;[VG][C(Carbamidomethyl (C))R]KKVV;R[VS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KPV;R{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAVV;[KT]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PA]R 6.5853;3.2199;3.0876;2.5265;2.4838;2.3942;2.2857;2.2164;2.187;0.7619 +;-;-;-;-;-;-;-;-;- + 571 + 1 1.291 62847.0 1.0 10200 4901 15089 HBL1_DMSO_200M_050219_2,15103 HBL1_DMSO_200M_050219_2,15103,GVLDTLTKV True True GVLDTLTKV 79.495374 473.284655749798 33591144.0 15089.0 ENSG00000214114|ENST00000397572|MYCBP;;ENST00000495043.5_1_1:39330344-39338774:-|nuORF 6.590386867523193 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15104 79.498 135.0 550960.0 25 0 74883.0 + 31160 RLPDTALPTL 10 82 548.8216094916753 1095.6286660501503 2 548.8221313357353 MULTI CID FTMS 0 0 0 15089 402486.15625 0.6686070608580019 1 -0.058685302734375 15 Unmodified _RLPDTALPTL_ ENSG00000262246|ENST00000251166|CORO7;ENST00000575531.5_1_16:4407102-4412712:-|nuORF;ENST00000575714.5_1_16:4408319-4455566:-|nuORF;nc|ENSG00000262246|P57737-2|CORO7;nc|ENSG00000262246|P57737-3|CORO7;nc|ENSG00000262246|P57737-4|CORO7 38.61474834105838 0.1721950110283317 4 [TP]{I|L}[RD]A{I|L}PT{I|L} 10 4 + 59.799 0.0 0.0 5.4579 5.4579 87.215 0.0 0.0 0.0 22.715299873086607 25.344406447039063 22.715299873086607 21.219778296232683 0 0.8182503180159344 1.5228787452803376 0.9731975075880328 0.0 [TP]{I|L}[RD]A{I|L}PT{I|L};[TP]{I|L}[WK]{I|L}[EP]{I|L};[KP]QQTA{I|L}PT{I|L};[R{I|L}][DP]TA{I|L}PT{I|L};[{I|L}T]P[RD]A{I|L}PT{I|L};[{I|L}P]T[RD]A{I|L}PT{I|L};[{I|L}P][RD]TA{I|L}PT{I|L};[{I|L}T]P[WK]{I|L}[EP]{I|L};[{I|L}P]T[WK]{I|L}[EP]{I|L};[{I|L}T]H[{I|L}A]{I|L}[C(Carbamidomethyl (C))R]{I|L} 5.4579;3.5212;3.1355;3.0632;3.0464;2.8327;2.7885;1.1096;0.89593;0.46916 -;-;-;+;-;-;-;-;-;- + 213 1 1.291 64891.9 1.0 10201 4901 15089 HBL1_DMSO_200M_050219_2,15104 HBL1_DMSO_200M_050219_2,15104,RLPDTALPTL False True RLPDTALPTL 79.498117 548.822131335735 12053891.0 15089.0 nc|ENSG00000262246|P57737-2|CORO7;;nc|ENSG00000262246|P57737-4|CORO7;;ENST00000575531.5_1_16:4407102-4412712:-|nuORF;;ENSG00000262246|ENST00000251166|CORO7;;nc|ENSG00000262246|P57737-3|CORO7;;ENST00000575714.5_1_16:4408319-4455566:-|nuORF 6.105939865112305 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15105 79.508 540.0 333380.0 25 0 39454.0 + -1 YYTVRQLEL 9 180 592.3122931769489 1182.6100334206976 2 592.8185302615166 MULTI CID FTMS 0 0 0 15089 381282.5 0.4428604137299418 4 -0.3924331665039062 16 Carbamidomethyl (C) _LSTLSRSLFC(Carbamidomethyl (C))_ chr20:50510590-50564969|15|13.53|0.25|5.77|+|ENST00000541713|PTPN1,PTPN1;ENSG00000196396|ENST00000371621|PTPN1 20.41453444215458 0.5050059513928961 4 YYT[RV]Q{I|L}P[SG] 10 -1 + 42.945 0.0 0.0 3.6314 3.6314 72.829 0.0 0.0 0.0 6.123073165847082 5.764837301042718 5.764837301042718 6.123073165847082 0 0.0 2.0 1.1852808426569672 0.0 YYT[RV]Q{I|L}P[SG];{[QN]|[E{I|L}]|[KN]}[DP]{I|L}KD{I|L}P[SG];[{I|L}T]V{[MG]|[TS]}RS{I|L}Y[SG];[{I|L}T]V{[MG]|[TS]}RVTY[SG];YYT[RV][AG]{I|L}P[SG];[{I|L}T]WTRS{I|L}Y[SG];[{I|L}T]WTRVTY[SG];[VP]EE{I|L}KD{I|L}P[SG];{[TV]|[{I|L}S]}{I|L}{[MG]|[TS]}RS{I|L}Y[SG];{[TV]|[{I|L}S]}{I|L}{[MG]|[TS]}RVTY[SG] 3.6314;3.1136;3.0339;2.9476;2.8565;2.8474;2.7611;2.7557;2.719;2.6327 -;-;-;-;-;-;-;-;-;- 3116 1 1.291 132021.7 1.0 10202 4901 15089 HBL1_DMSO_200M_050219_2,15105 HBL1_DMSO_200M_050219_2,15105,LSTLSRSLFC False False YYTVRQLEL 79.50762 592.818530261517 3724421.5 15089.0 chr20:50510590-50564969|15|13.53|0.25|5.77|+|ENST00000541713|PTPN1,PTPN1;;ENSG00000196396|ENST00000371621|PTPN1 6.333464622497559 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15106 79.513 286.0 232590.0 25 0 49333.0 20942 LNFLRCKRIF 10 104 437.2572260113853 1308.749848634356 3 437.2573425173759 MULTI CID FTMS 0 0 0 15089 360476.15625 1.0 0 0.0 17 Unmodified _LNFLRCKRIF_ ENSG00000087008|ENST00000356406|ACOX3;nc|ENSG00000087008|O15254-2|ACOX3 1.6526216038709556 0.7189921496796233 4 {I|L} 1 9 9.3323 0.0 0.0 0.71307 0.0 0.0 1177.6546012972449 0.0 1177.6546012972449 0.0 0.6563945731965948 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.71307 + + 20 + 1 1.291 72398.6 1.0 10203 4901 15089 HBL1_DMSO_200M_050219_2,15106 HBL1_DMSO_200M_050219_2,15106,LNFLRCKRIF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15107 79.515 82.0 700560.0 25 0 76185.0 + + -1 IMLEALERV 9 82 545.3028132116285 1088.591073490057 2 545.3038818240166 MULTI CID FTMS 0 0 0 15089 381150.0625 0.8569719598326078 -3 0.33740234375 18 Oxidation (M) _LM(Oxidation (M))IQAKLQE_ nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG 19.256988751693697 0.3154191944385105 4 [Y{I|L}]PVVEK{[QN]|[E{I|L}]|[KN]} 9 -1 + 40.199 0.0 0.0 3.6928 3.6928 64.982 0.0 0.0 0.0 1.0914446942506757 2.975694635544741 1.0914446942506757 1.0914446942506757 0 0.8807196863200843 1.6989700043360187 0.0 0.0 [Y{I|L}]PVVEK{[QN]|[E{I|L}]|[KN]};{I|L}{I|L}{M(Oxidation (M))|F}VVEK{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EA[{I|L}T]SPV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[Y{I|L}]PVVE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVEK{[QN]|[E{I|L}]|[KN]};{I|L}{I|L}{M(Oxidation (M))|F}VVE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KNA[{I|L}T]SPV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KEVVQQV;[Y{I|L}]PVV{[SA]|[TG]}V{[QN]|[E{I|L}]|[KN]} 3.6928;3.5925;3.3966;3.149;3.0665;2.9662;2.9662;2.799;2.731;2.6851 -;-;-;-;-;-;-;-;-;- 450 1 1.291 54134.4 1.0 10204 4901 15089 HBL1_DMSO_200M_050219_2,15107 HBL1_DMSO_200M_050219_2,15107,LMIQAKLQE False False IMLEALERV 79.514727 545.303881824017 2787101.0 15089.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 0.8573555598656336 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15108 79.518 194.0 433590.0 25 0 87628.0 -1 0 90 974.9627004435516 1947.910847953904 2 975.4716064333916 MULTI CID FTMS 0 0 0 15089 363626.875 0.4976404539743972 2 -0.1980743408203125 19 4 [DP]G{M(Oxidation (M))|F}EN{I|L}AV 9 -1 39.932 0.0 0.0 2.05 0.0 0.0 0.0 1002.4305982803284 1002.4305982803284 14.525618827129286 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 1.0356668758921828 [DP]G{M(Oxidation (M))|F}EN{I|L}AV 2.05 - 1477 1 1.291 59936.5 1.0 10205 4901 15089 HBL1_DMSO_200M_050219_2,15108 HBL1_DMSO_200M_050219_2,15108, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15109 79.525 287.0 299930.0 25 0 30363.0 + 5037 DGWTPLHV 8 119 462.73228478493735 923.4500166366748 2 462.7325012087822 MULTI CID FTMS 0 0 0 15089 317306.125 0.0328961800838779 5 -0.534515380859375 20 Unmodified _DGWTPLHV_ ENSG00000183475|ENST00000332783|ASB7;nc|ENSG00000183475|Q9H672-2|ASB7 26.34127834903884 0.4900704351052977 4 TP{I|L}VH 5 5 19.629 0.0 0.0 2.1256 0.0 0.0 358.12652112425616 0.0 358.12652112425616 0.0 5.649575422761828 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 TP{I|L}VH 2.1256 - 167 + 1 1.291 68311.1 1.0 10206 4901 15089 HBL1_DMSO_200M_050219_2,15109 HBL1_DMSO_200M_050219_2,15109,DGWTPLHV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15111 79.529 100.0 613960.0 25 0 68966.0 + 23858 LVIQKYWRR 9 71 421.2556697467544 1260.7451798404632 3 421.2558471560478 MULTI CID FTMS 0 0 0 15110 516096.9375 0.3971343118944491 2 -0.2353744506835937 1 Unmodified _LVIQKYWRR_ ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM 11.640296217721598 0.521594087909532 4 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 7 + 82.88 0.0 0.0 6.5739 6.5739 87.196 0.0 0.0 0.0 59.23516269895728 14.146518864155126 14.146518864155126 9.164539485499262 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR 6.5739;5.847 -;- 174 + 1 1.291 60622.5 1.0 10207 4902 15110 HBL1_DMSO_200M_050219_2,15111 HBL1_DMSO_200M_050219_2,15111,LVIQKYWRR False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15112 79.538 495.0 413220.0 25 0 52423.0 -1 LSIRLVMVCLT 11 160 632.3618132882356 1262.709073643271 2 632.3615600466728 MULTI CID FTMS 0 0 0 15110 380516.0625 0.8870733243410702 1 -0.1393890380859375 2 Oxidation (M) _LSIRLVM(Oxidation (M))VCLT_ ENSG00000186335|ENST00000335244|SLC36A2;nc|ENSG00000186335|Q495M3-2|SLC36A2;nc|ENSG00000186335|Q495M3-3|SLC36A2 8.745405648335112 0.8338865417133445 4 [{I|L}V]TG 4 -1 11.476 0.0 0.0 0.90881 0.0 0.0 0.0 889.4651357727028 889.4651357727028 1.3869852685074626 0.0 0.0 0.0 0 0.0 1.154901959985743 0.3807196863200844 0.0 [{I|L}V]TG 0.90881 - 405 1 1.291 152829.2 1.0 10208 4902 15110 HBL1_DMSO_200M_050219_2,15112 HBL1_DMSO_200M_050219_2,15112,LSIRLVMVCLT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15113 79.539 12.0 5348200.0 25 0 704250.0 + 34903 SQIEADFRL 9 72 539.7801363315979 1077.5457197299957 2 539.7805663943291 MULTI CID FTMS 0 0 0 15110 4044810.5 0.251966050204454 -1 0.058685302734375 3 Unmodified _SQIEADFRL_ ENSG00000198900|ENST00000361337|TOP1 47.594388314883695 0.0456443387682827 4 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}] 9 2 + 63.579 0.0 0.0 5.9003 5.9003 80.099 0.0 0.0 0.0 17.60521762079925 4.771212547196626 4.771212547196626 4.771212547196626 0 1.0 1.0457574905606752 0.4247425010840047 0.0 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}EAD{M(Oxidation (M))|F}[R{I|L}] 5.9003;5.4576 -;+ + 139 + 1 1.291 54861.5 1.0 10209 4902 15110 HBL1_DMSO_200M_050219_2,15113 HBL1_DMSO_200M_050219_2,15113,SQIEADFRL True True SQIEADFRL 79.53919 539.780566394329 351163248.0 15110.0 ENSG00000198900|ENST00000361337|TOP1 5.541080315907796 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15114 79.54 40.0 1248700.0 25 0 121920.0 + 39151 TYNRRPDTL 9 80 568.2978247350383 1134.5810965368764 2 568.2991210818291 MULTI CID FTMS 0 0 0 15110 974091.0 0.3405065785650334 -4 0.396087646484375 4 Unmodified _TYNRRPDTL_ REV__ENSG00000163605|ENST00000356692|PPP4R2;REV__ENST00000429866.1_1_3:195664216-195664672:+|nuORF;REV__ENST00000470976.1_1_3:73045993-73110212:+|nuORF;REV__ENST00000504656.1_1_5:289217-290334:-|nuORF;REV__nc|ENSG00000163605|Q9NY27-2|PPP4R2;REV__nc|ENSG00000163605|Q9NY27-3|PPP4R2 7.910154910731844 0.6385446671287552 4 [Q{I|L}]MDV{I|L}T 7 -1 28.989 0.0 0.0 2.5551 0.0 0.0 0.0 331.1470892506691 331.1470892506691 16.514866574625913 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 [Q{I|L}]MDV{I|L}T 2.5551 - 174 1 1.291 39917.5 1.0 10210 4902 15110 HBL1_DMSO_200M_050219_2,15114 HBL1_DMSO_200M_050219_2,15114,TYNRRPDTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15115 79.549 475.0 425660.0 25 0 41464.0 -1 TGRDLDDVCL 10 185 582.2726522031714 1162.5307514731428 2 582.2739135622978 MULTI CID FTMS 0 0 0 15110 480699.5625 1.0 0 0.0 5 Carbamidomethyl (C) _TGRDLDDVC(Carbamidomethyl (C))L_ ENST00000527245.5_1_11:124746542-124746584:+|nuORF 17.11289562659939 0.5604042439455784 4 {[TV]|[{I|L}S]}C(Carbamidomethyl (C))P{I|L}Y{I|L} 7 -1 34.785 0.0 0.0 2.9921 0.0 0.0 0.0 313.0777768272713 313.0777768272713 13.84253832056374 0.0 0.0 0.0 0 0.5891368308784531 1.3979400086720375 0.0 0.0 {[TV]|[{I|L}S]}C(Carbamidomethyl (C))P{I|L}Y{I|L} 2.9921 - 6520 1 1.291 151019.0 1.0 10211 4902 15110 HBL1_DMSO_200M_050219_2,15115 HBL1_DMSO_200M_050219_2,15115,TGRDLDDVCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15116 79.551 95.0 776040.0 25 0 49404.0 + 21331 LPFDRFSEV 9 100 555.2850660469281 0 555.2865478396416 PEAK CID FTMS 0 0 0 15110 444751.625 0.330787973493177 -2 0.1861953735351562 6 Unmodified _LPFDRFSEV_ ENSG00000070367|ENST00000621441|EXOC5;ENST00000510543.1_1_4:63682918-63683389:+|nuORF 26.268140514670165 0.1442484609216422 4 P{M(Oxidation (M))|F}VY 4 7 22.18 0.0 0.0 2.0008 0.0 0.0 113.08218202284054 486.2090548151001 599.2912368379406 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 P{M(Oxidation (M))|F}VY 2.0008 - 306 + 1 1.291 62851.2 1.0 10212 4902 15110 HBL1_DMSO_200M_050219_2,15116 HBL1_DMSO_200M_050219_2,15116,LPFDRFSEV False True LPFDRFSEV 79.550867 555.286547839642 11484680.0 15110.0 ENST00000510543.1_1_4:63682918-63683389:+|nuORF;;ENSG00000070367|ENST00000621441|EXOC5 3.6677464644114175 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15117 79.56 523.0 467590.0 25 0 41811.0 -1 ICQDMDCLML 10 163 629.2524534681289 1256.4903540030575 2 629.2526122927666 MULTI CID FTMS 0 0 0 15110 393535.53125 0.7549238568090537 1 -0.1393890380859375 7 Carbamidomethyl (C),Oxidation (M) _IC(Carbamidomethyl (C))QDM(Oxidation (M))DCLML_ ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188 13.90604991867851 0.6142120002215601 4 [YV]{I|L}PMSY 7 -1 48.281 0.0 0.0 3.8425 0.0 0.0 0.0 400.06486844675896 400.06486844675896 22.554198515508848 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3807196863200844 0.0 [YV]{I|L}PMSY 3.8425 - 761 + 1 1.291 183600.1 1.0 10213 4902 15110 HBL1_DMSO_200M_050219_2,15117 HBL1_DMSO_200M_050219_2,15117,ICQDMDCLML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15118 79.564 181.0 262250.0 25 0 50540.0 + 22791 LQSRLALEQRL 11 77 663.8958604693329 0 663.8959228396416 PEAK CID FTMS 0 0 0 15110 379797.0 1.0 0 0.0 8 Unmodified _LQSRLALEQRL_ REV__nc|ENSG00000137693|P46937-2|YAP1;REV__nc|ENSG00000137693|P46937-5|YAP1 8.745405648335112 0.4618489994582195 4 S 1 -1 7.9846 0.0 0.0 0.60225 0.0 0.0 997.6013084857376 238.1201113336547 1235.7214198193924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 S 0.60225 + + 46 + 1 1.291 49170.0 1.0 10214 4902 15110 HBL1_DMSO_200M_050219_2,15118 HBL1_DMSO_200M_050219_2,15118,LQSRLALEQRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15119 79.573 563.0 370460.0 25 0 25792.0 + + 30454 GVYDIDNKTIEL 12 177 690.3551107609372 1378.6956685886744 2 690.3570434451103 MULTI CID FTMS 0 0 0 15110 362559.34375 0.6931102082903322 -1 0.058685302734375 9 Unmodified _RDTWQRYLEL_ ENSG00000085719|ENST00000517490|CPNE3 41.95555342248728 0.1369168616057562 4 [VG]YD{I|L}DNKT{I|L}E{I|L} 12 -1 + 94.317 0.0 0.0 6.841 6.841 86.576 0.0 0.0 0.0 7.4791038261347325 15.106664456146277 7.4791038261347325 7.4791038261347325 0 3.4049471895720984 1.6989700043360187 0.805462187404089 0.3054621874040891 [VG]YD{I|L}DNKT{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}SW{M(Oxidation (M))|F}NKT{I|L}E{I|L};[VG]YD{I|L}DGGKT{I|L}E{I|L};[VG]YD{I|L}[NS]RT{I|L}E{I|L};[VG]YEVDNKT{I|L}E{I|L};[VG][NS]TG{M(Oxidation (M))|F}NKT{I|L}E{I|L};[{I|L}T]DW{M(Oxidation (M))|F}NKT{I|L}E{I|L};[VG][NS]T{I|L}DYR{I|L}E{I|L};[VG]YD{I|L}[NS]TR{I|L}E{I|L};{[YD]|[{M(Oxidation (M))|F}M]}VG{I|L}DNKT{I|L}E{I|L} 6.841;6.2986;6.1811;6.0883;6.026;5.9999;5.7772;5.7508;5.7391;5.7179 -;-;-;-;-;-;-;-;-;- 54550 1 1.291 152312.9 1.0 10215 4902 15110 HBL1_DMSO_200M_050219_2,15119 HBL1_DMSO_200M_050219_2,15119,RDTWQRYLEL False False GVYDIDNKTIEL 79.573492 690.35704344511 8738369.0 15110.0 ENSG00000085719|ENST00000517490|CPNE3 6.755883534749349 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15120 79.579 292.0 501550.0 25 0 65257.0 + 3092 AVPDEIPPL 9 113 475.7635912955085 949.512629657817 2 475.7635375857353 MULTI CID FTMS 0 0 0 15110 339496.25 0.5293879332718241 -3 0.3614044189453125 10 Unmodified _AVPDEIPPL_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 24.67388899826682 0.2172451872415813 4 [DP]E{I|L}AV 6 5 32.075 0.0 0.0 3.3781 0.0 0.0 0.0 322.1784371131483 322.1784371131483 7.013356515246521 0.0 0.0 0.0 0 0.5 0.9208187539523752 0.3252574989159953 0.0 [DP]E{I|L}AV 3.3781 - 264 1 1.291 117510.2 1.0 10216 4902 15110 HBL1_DMSO_200M_050219_2,15120 HBL1_DMSO_200M_050219_2,15120,AVPDEIPPL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15121 79.58 42.0 886650.0 25 0 61215.0 + 10035 FPNIHPPQI 9 85 531.7903472200135 1061.5661415068269 2 531.7905151247978 MULTI CID FTMS 0 0 0 15110 293815.28125 0.2088695496937764 -6 0.618896484375 11 Unmodified _FPNIHPPQI_ ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-3|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 26.88365393820708 0.1891292719743517 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}HP[QP]{I|L} 9 0 + 28.043 0.0 0.0 2.6417 2.6417 64.735 0.0 0.0 0.0 10.480006109659076 1.1270428019128822 1.1270428019128822 2.218487496163561 0 0.4247425010840047 1.5228787452803376 0.0 0.3494850021680094 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}HP[QP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}KPH{[QV]|[N{I|L}]|[RA]|[KV]}[EP];[{I|L}A][TA]PH{[QV]|[N{I|L}]|[RA]|[KV]}[EP];{[TV]|[{I|L}S]}[VG]PH{[QV]|[N{I|L}]|[RA]|[KV]}[EP] 2.6417;2.4327;1.3363;0.50671 +;-;-;- + 143 + 1 1.291 37418.3 1.0 10217 4902 15110 HBL1_DMSO_200M_050219_2,15121 HBL1_DMSO_200M_050219_2,15121,FPNIHPPQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15122 79.584 163.0 818340.0 25 0 109110.0 + 4636 DAYVLPKL 8 94 459.7682070317223 917.5218611302446 2 459.7698242068291 MULTI CID FTMS 0 0 0 15110 321025.625 0.0121261881488173 -5 0.567596435546875 12 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 48.345845343767074 0.1470278396477103 4 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 + 69.518 0.0 0.0 7.5767 7.5767 93.788 0.0 0.0 0.0 31.515540438002496 12.184290373512034 12.184290373512034 14.82016661481893 0 1.2302046884880935 1.6989700043360187 0.0 0.2302046884880938 + + {[DA]|[EG]}YV{I|L}PK{I|L};{[DA]|[EG]}YV{I|L}{I|L}[KP];[{I|L}P]K[YG]{I|L}EV;[KP]{I|L}[YG]{I|L}EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KP]V{I|L}EV 7.5767;5.9615;3.0933;3.0108;2.5101 +;-;-;-;- + 171 + 1 1.291 106110.2 1.0 10218 4902 15110 HBL1_DMSO_200M_050219_2,15122 HBL1_DMSO_200M_050219_2,15122,DAYVLPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15123 79.597 736.0 247800.0 25 0 59030.0 42720 VVASSFALG 9 119 425.73895003504856 849.4633471368971 2 425.7390014529228 MULTI CID FTMS 0 0 0 15110 299149.09375 0.4338452827113708 4 -0.475830078125 13 Unmodified _VVASSFALG_ ENSG00000260903|ENST00000562532|XKR7 15.847184025352805 0.4077185912009129 4 VVA 3 6 41.054 0.0 0.0 4.8329 0.0 0.0 0.0 577.2691755574677 577.2691755574677 29.460295554662125 0.0 0.0 0.0 0 0.43986268792935 1.5228787452803376 0.0 0.0 + VVA 4.8329 + + 66 + 1 1.291 142562.8 1.0 10219 4902 15110 HBL1_DMSO_200M_050219_2,15123 HBL1_DMSO_200M_050219_2,15123,VVASSFALG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15124 79.601 178.0 429200.0 25 0 32777.0 -1 GAAFLFMTFH 10 87 386.5192895040948 1156.5360391124843 3 386.5193969607353 MULTI CID FTMS 0 0 0 15110 257913.296875 0.0942942220620468 -3 0.3614044189453125 14 Oxidation (M) _GAAFLFM(Oxidation (M))TFH_ ENSG00000112249|ENST00000369162|ASCC3;ENST00000468245.2_1_6:101296020-101315873:-|nuORF;nc|ENSG00000112249|Q8N3C0-4|ASCC3 12.872603262515298 0.6315522313594999 4 V{I|L}{M(Oxidation (M))|F} 3 -1 22.703 0.0 0.0 1.963 0.0 0.0 0.0 794.310447953714 794.310447953714 2.2577249674798594 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}{M(Oxidation (M))|F} 1.963 - 66 + 1 1.291 72018.4 1.0 10220 4902 15110 HBL1_DMSO_200M_050219_2,15124 HBL1_DMSO_200M_050219_2,15124,GAAFLFMTFH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15125 79.614 800.0 153080.0 25 0 20430.0 -1 0 105 1006.1390944616072 3015.395453985021 3 1006.80968016386 MULTI CID FTMS 0 0 0 15110 245611.375 1.0 0 0.0 15 4 [NP]{I|L}NM 5 -1 16.198 0.0 0.0 0.53717 0.0 0.0 0.0 2443.112653041915 2443.112653041915 1.6281509375753505 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}NM 0.53717 - 1157 1 1.291 89939.8 0.9200000166893004 10221 4902 15110 HBL1_DMSO_200M_050219_2,15125 HBL1_DMSO_200M_050219_2,15125, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15126 79.619 263.0 405240.0 25 0 36711.0 + 24320 MEDLIHEI 8 134 500.2437437430484 998.4729345528968 2 500.2439453005791 MULTI CID FTMS 0 0 0 15110 207417.40625 0.8095247533000203 -1 0.058685302734375 16 Unmodified _MEDLIHEI_ ENSG00000147604|ENST00000352983|RPL7;ENST00000461513.1_1_17:49579856-49580498:-|nuORF;ENST00000478965.1_1_5:94161779-94162088:-|nuORF;ENST00000481157.1_1_12:65261855-65261975:-|nuORF 60.38955033654506 0.1153153300159026 4 MED{I|L}{I|L}{I|L}{[YC]|[HE]} 8 2 + 79.435 0.0 0.0 7.9556 7.9556 95.497 0.0 0.0 0.0 30.600621355139523 13.327731244245342 13.327731244245342 20.828956512079344 0 0.8494850021680094 2.0 1.5356668758921828 0.0 MED{I|L}{I|L}{I|L}{[YC]|[HE]};MED{I|L}{I|L}[NP][PA];{[QN]|[E{I|L}]|[KN]}HVEE{I|L}M;ME[{M(Oxidation (M))|F}V]{I|L}[{M(Oxidation (M))|F}T]{I|L};{[QN]|[E{I|L}]|[KN]}H{I|L}DE{I|L}M;ME[C(Carbamidomethyl (C))K][YR]{I|L};{[YC]|[HE]}{I|L}VEE{I|L}M;[{I|L}T][YT]EE{I|L}M;[H{I|L}]EVEE{I|L}M;{[YC]|[HE]}{I|L}{I|L}DE{I|L}M 7.9556;5.8696;5.2896;4.9447;4.6866;4.4549;4.4132;4.221;4.0447;3.8102 -;-;-;-;-;-;-;-;-;- 702 + 1 1.291 87749.2 1.0 10222 4902 15110 HBL1_DMSO_200M_050219_2,15126 HBL1_DMSO_200M_050219_2,15126,MEDLIHEI True True MEDLIHEI 79.619287 500.243945300579 2621375.25 15110.0 ENST00000481157.1_1_12:65261855-65261975:-|nuORF;;ENSG00000147604|ENST00000352983|RPL7;;ENST00000461513.1_1_17:49579856-49580498:-|nuORF;;ENST00000478965.1_1_5:94161779-94162088:-|nuORF 4.350726207097371 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15127 79.634 800.0 243460.0 25 0 11867.0 -1 RQMPSRPWGLL 11 197 678.861251096141 1355.707949259082 2 679.3646728396416 MULTI CID FTMS 0 0 0 15110 202661.234375 0.6660498453898571 -2 0.1861953735351562 17 Oxidation (M) _RQM(Oxidation (M))PSRPWGLL_ ENST00000564965.5_2_16:50321972-50322137:+|nuORF 22.736283301280096 0.5583477779825423 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}{I|L}NESTG{I|L}{I|L} 12 -1 + 40.968 0.0 0.0 3.0219 3.0219 64.168 0.0 0.0 0.0 1.6021969467540416 5.315753723907974 1.6021969467540416 1.6021969467540416 0 0.4247425010840047 0.6777807052660807 0.8921590589602533 1.1281446971601314 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}{I|L}NESTG{I|L}{I|L};[{I|L}P]YH{I|L}NESTG{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}ASE[HS]TVTG{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}ASE[HS]{I|L}STG{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}ASE[HS]T[SG]{I|L}{I|L}{I|L};[DV]VSE[HS]T[SG]{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}[DP]Q{I|L}NESTG{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}H{I|L}NESTG{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}SAE[HS]TVTG{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{I|L}NESTG{I|L}{I|L} 3.0219;2.9037;2.6172;2.5974;2.5758;2.5688;2.5418;2.5406;2.5094;2.5068 -;-;-;-;-;-;-;-;-;- 10875 1 1.291 140245.5 0.959999978542328 10223 4902 15110 HBL1_DMSO_200M_050219_2,15127 HBL1_DMSO_200M_050219_2,15127,RQMPSRPWGLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15128 79.647 724.0 238450.0 25 0 22099.0 + 17187 KLLDERLVTL 10 200 600.3712845345409 1198.7280161358815 2 600.3710204958916 MULTI CID FTMS 0 0 0 15110 178002.828125 1.0 0 0.0 18 Unmodified _KLLDERLVTL_ ENSG00000176390|ENST00000324238|CRLF3;nc|ENSG00000176390|Q8IUI8-2|CRLF3 35.61225514009592 0.2039006631696762 4 K{I|L}{I|L}D{[QN]|[E{I|L}]|[KN]}[RV]T{I|L} 10 2 + 54.157 0.0 0.0 4.5179 4.5179 77.939 0.0 0.0 0.0 32.37718553149961 4.359243171031089 4.359243171031089 8.442868091983591 0 1.4634679910804405 0.3665315444204134 1.045114016114533 0.0 K{I|L}{I|L}D{[QN]|[E{I|L}]|[KN]}[RV]T{I|L};K{I|L}{I|L}D{[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L};K{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}[QP]{I|L};K{I|L}{I|L}D{[QN]|[E{I|L}]|[KN]}[R{I|L}]TV;K{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M[RV]PV;K{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}AAPV;[K{I|L}]{I|L}DQQ[K{I|L}]T{I|L};{I|L}{I|L}KDQQ[K{I|L}]T{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}QQ[K{I|L}]T{I|L};[K{I|L}]D{I|L}QQ[K{I|L}]T{I|L} 4.5179;3.8136;3.7283;3.4155;2.8596;2.759;1.4954;1.4185;1.3994;1.2634 -;-;-;-;-;-;-;-;-;- 1721 + 1 1.291 127361.5 1.0 10224 4902 15110 HBL1_DMSO_200M_050219_2,15128 HBL1_DMSO_200M_050219_2,15128,KLLDERLVTL False True KLLDERLVTL 79.646854 600.3724 1217683.5 15110.0 ENSG00000176390|ENST00000324238|CRLF3;;nc|ENSG00000176390|Q8IUI8-2|CRLF3 4.14043124516805 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15129 79.651 196.0 347060.0 25 0 36754.0 -1 FVNVATYCGL 10 97 381.85640053382417 1142.5473722016725 3 381.8560058474541 MULTI CID FTMS 0 0 0 15110 175757.515625 0.3804357318045485 -3 0.3614044189453125 19 Carbamidomethyl (C) _FVNVATYC(Carbamidomethyl (C))GL_ ENSG00000224586|ENST00000412168|GPX5;nc|ENSG00000224586|O75715-2|GPX5 8.97624648632007 0.6851160995914376 4 {I|L} 1 -1 11.99 0.0 0.0 1.0494 0.0 0.0 1011.4523232288194 0.0 1011.4523232288194 0.0 -7.843181179205061 -7.843181179205061 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0494 + + 156 + 1 1.291 61728.6 1.0 10225 4902 15110 HBL1_DMSO_200M_050219_2,15129 HBL1_DMSO_200M_050219_2,15129,FVNVATYCGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15130 79.664 800.0 270450.0 25 0 15330.0 -1 0 139 994.9413292065676 1987.8681054799351 2 994.9387084841728 MULTI CID FTMS 0 0 0 15110 176240.1875 1.0 0 0.0 20 4 [{I|L}T]QY{I|L}ENY 8 -1 50.425 0.0 0.0 2.5366 0.0 0.0 0.0 960.3591622828916 960.3591622828916 24.771664843060176 0.0 0.0 0.0 0 0.4929928190999391 2.0 0.3807196863200844 0.3807196863200844 [{I|L}T]QY{I|L}ENY 2.5366 - 4977 + 1 1.291 140489.0 0.9900000095367432 10226 4902 15110 HBL1_DMSO_200M_050219_2,15130 HBL1_DMSO_200M_050219_2,15130, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15132 79.669 0.55 84533000.0 25 0 9524000.0 27241 PGQIFHPPNI 10 73 560.3015854213894 1118.5886179095787 2 560.3029662966728 MULTI CID FTMS 0 0 0 15131 100888280.0 0.7449087216159023 -1 0.1393890380859375 1 Unmodified _PGQIFHPPNI_ ENST00000367884.6_1_1:165600502-165604990:+|nuORF 6.2057823575117 0.6979311171683138 4 [VP]VSGM{I|L}T 8 9 37.159 0.0 0.0 3.322 0.0 0.0 0.0 331.1515363036273 331.1515363036273 12.901763648293354 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.5 0.0 [VP]VSGM{I|L}T 3.322 - 231 1 1.275 39834.9 1.0 10227 4903 15131 HBL1_DMSO_200M_050219_2,15132 HBL1_DMSO_200M_050219_2,15132,PGQIFHPPNI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15133 79.67 27.0 1632800.0 25 0 184220.0 + 2816 ATYVFLHTV 9 83 525.7839540231524 1049.5533551131048 2 525.7849609255791 MULTI CID FTMS 0 0 0 15131 1253462.0 0.346555559088339 2 -0.1943588256835937 2 Unmodified _ATYVFLHTV_ ENSG00000123353|ENST00000243045|ORMDL2 64.23631603340823 0.0237365939569086 4 [TA]YV{M(Oxidation (M))|F}{I|L}H{[TV]|[{I|L}S]} 9 0 + 70.269 0.0 0.0 6.6952 6.6952 93.234 0.0 0.0 0.0 37.29364375124895 22.28397125236296 22.28397125236296 40.9378134965327 0 0.3494850021680094 1.6989700043360187 1.9361818737241727 0.0 + + [TA]YV{M(Oxidation (M))|F}{I|L}H{[TV]|[{I|L}S]};[YV][HV]VVY[TA];AA{[NV]|[RG]}{I|L}{M(Oxidation (M))|F}VY[PG];[H{I|L}]{M(Oxidation (M))|F}TVVY[TA];AA{[NV]|[RG]}{I|L}EVY[TA];[HT]V{I|L}{M(Oxidation (M))|F}VY[TA];[H{I|L}]S{I|L}{M(Oxidation (M))|F}VY[TA];AA{[NV]|[RG]}{I|L}{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TA] 6.6952;2.7947;2.6994;1.7228;1.3382;1.2682;1.1759;0.57991 +;-;-;-;-;-;-;- + 268 + 1 1.275 40874.4 1.0 10228 4903 15131 HBL1_DMSO_200M_050219_2,15133 HBL1_DMSO_200M_050219_2,15133,ATYVFLHTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15134 79.671 16.0 3113000.0 25 0 392120.0 + 24877 MPMQDIKMI 9 73 553.7740716085459 1105.5335902838915 2 553.7748901247978 MULTI CID FTMS 0 0 0 15131 3205145.75 0.6584947351066 -1 0.1393890380859375 3 Unmodified _MPMQDIKMI_ ENSG00000185686|ENST00000405655|PRAME 67.83816525789305 0.0219346420158844 4 MPMQD{I|L}KM{I|L} 9 0 + 85.889 0.0 0.0 7.769 7.769 91.416 0.0 0.0 0.0 63.49275660196689 11.478174818886371 11.478174818886371 9.208187539523747 0 2.2302046884880937 2.0 0.0 0.3054621874040891 + + MPMQD{I|L}KM{I|L};MPM[AG]D{I|L}KM{I|L};{NN|[MP]|[D{I|L}]|[EV]}QD{I|L}[Q{I|L}][YV];[YV][VG][C(Carbamidomethyl (C))H]KM{I|L};[YV]PMAAPNM{I|L};[YV]P{[WS]|[C(Carbamidomethyl (C)){I|L}]}PNM{I|L};[YV]MPAANPM{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]D{I|L}[Q{I|L}][YV] 7.769;6.936;1.7729;1.2087;1.1713;1.1199;1.1199;0.93994 +;-;-;-;-;-;-;- + 360 + 1 1.275 41227.0 1.0 10229 4903 15131 HBL1_DMSO_200M_050219_2,15134 HBL1_DMSO_200M_050219_2,15134,MPMQDIKMI True True MPMQDIKMI 79.67101 553.774890124798 75687384.0 15131.0 ENSG00000185686|ENST00000405655|PRAME 7.915863513946533 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15135 79.672 30.0 1778500.0 25 0 139410.0 + 12236 GQWASVIRV 9 72 508.2879547364952 1014.5613565397904 2 508.2883483767509 MULTI CID FTMS 0 0 0 15131 1687472.25 0.7128777086233957 -1 0.1393890380859375 4 Unmodified _GQWASVIRV_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000562722.1_1_16:70597761-70599451:+|nuORF;nc|ENSG00000189091|Q15393-3|SF3B3 38.17557092003332 0.0854718145212029 4 {[QG]|[NA]}WASV{I|L}[RV] 9 0 + 52.369 0.0 0.0 5.1617 5.1617 76.993 0.0 0.0 0.0 7.147642715192504 9.777236052888476 7.147642715192504 4.771212547196626 0 0.9247425010840048 0.0 0.0 0.4247425010840047 + + {[QG]|[NA]}WASV{I|L}[RV];{[QG]|[NA]}WAVS{I|L}[RV];{[QG]|[NA]}WVAS{I|L}[RV];{[QG]|[NA]}WASV[RV]{I|L};{[QG]|[NA]}VWAS{I|L}[RV];{[QG]|[NA]}WAVS[RV]{I|L};{[QG]|[NA]}WVAS[RV]{I|L};{[QG]|[NA]}V[MN]V{I|L}[RV];{[QG]|[NA]}VWAS[RV]{I|L};{[QG]|[NA]}V[MN]V[RV]{I|L} 5.1617;4.6914;4.3947;4.198;3.9761;3.7278;3.431;3.1916;3.0124;2.2279 +;-;-;-;-;-;-;-;-;- + 186 + 1 1.275 44944.2 1.0 10230 4903 15131 HBL1_DMSO_200M_050219_2,15135 HBL1_DMSO_200M_050219_2,15135,GQWASVIRV True True GQWASVIRV 79.672187 508.288348376751 15838651.0 15131.0 ENST00000562722.1_1_16:70597761-70599451:+|nuORF;;nc|ENSG00000189091|Q15393-3|SF3B3;;ENSG00000189091|ENST00000302516|SF3B3 6.570424556732178 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15136 79.674 58.0 619790.0 25 0 155760.0 + -1 LRLCLRPEPR 10 54 655.3824352675513 1308.7503176019025 2 655.3820068240166 MULTI CID FTMS 0 0 0 15131 1099865.75 0.7092837552259634 2 -0.1943588256835937 5 Carbamidomethyl (C) _LRLC(Carbamidomethyl (C))LRPEPR_ REV__ENST00000557552.1_1_14:105239464-105240028:-|nuORF 1.6526216038709556 0.7189921496796233 4 {M(Oxidation (M))|F}GSV 4 -1 15.918 0.0 0.0 1.2162 0.0 0.0 654.4009046153775 261.1616610162719 915.5625656316496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}GSV 1.2162 - 20 + 1 1.275 42599.5 1.0 10231 4903 15131 HBL1_DMSO_200M_050219_2,15136 HBL1_DMSO_200M_050219_2,15136,LRLCLRPEPR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15137 79.675 40.0 1167800.0 25 0 84358.0 + 10525 FVDPAQITM 9 80 511.2545127153543 1020.4944724975086 2 511.2551757693291 MULTI CID FTMS 0 0 0 15131 951399.3125 0.1995551039075828 -2 0.1980743408203125 6 Unmodified _FVDPAQITM_ ENSG00000167325|ENST00000300738|RRM1 25.399314129420983 0.2080152500878129 4 [{M(Oxidation (M))|F}V]DPAQ 6 3 24.103 0.0 0.0 2.3619 0.0 0.0 0.0 360.1586487502852 360.1586487502852 2.336740400816033 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + [{M(Oxidation (M))|F}V]DPAQ 2.3619 + + 235 1 1.275 40857.3 1.0 10232 4903 15131 HBL1_DMSO_200M_050219_2,15137 HBL1_DMSO_200M_050219_2,15137,FVDPAQITM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15138 79.677 74.0 944320.0 25 0 121980.0 + 5771 DPPKVILI 8 87 447.7866810652407 893.5588091972813 2 447.7868224978447 MULTI CID FTMS 0 0 0 15131 657985.9375 0.4827237333389579 -1 0.1393890380859375 7 Unmodified _DPPKVILI_ ENST00000592087.1_1_19:36980552-36981209:+|nuORF 32.30548876998284 0.3644845974844379 4 [KP]{I|L}VPD{I|L}{I|L} 8 5 + 43.849 0.0 0.0 4.9073 4.9073 75.867 0.0 0.0 0.0 4.164317917986224 29.156687756324686 4.164317917986224 4.771212547196626 0 0.3494850021680094 0.0 0.0 0.0 [KP]{I|L}VPD{I|L}{I|L};[KP]V{I|L}PD{I|L}{I|L};[KP]{I|L}{I|L}VPD{I|L};[KP]VP{I|L}D{I|L}{I|L};[KP]{I|L}VP{I|L}D{I|L};[KP]VPD{I|L}{I|L}{I|L};[KP]{I|L}V{I|L}PD{I|L};[KP]PV{I|L}D{I|L}{I|L};[KP]PVD{I|L}{I|L}{I|L};[KP]V{I|L}P{I|L}D{I|L} 4.9073;4.3733;3.8738;3.8394;3.7339;3.7171;3.5369;3.5025;3.3803;3.2 -;-;-;-;-;-;-;-;-;- 394 1 1.275 57113.0 1.0 10233 4903 15131 HBL1_DMSO_200M_050219_2,15138 HBL1_DMSO_200M_050219_2,15138,DPPKVILI False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15139 79.678 54.0 659780.0 25 0 121350.0 + 39033 TVTITGIVKV 10 62 515.8289592471443 1029.6433655610886 2 515.8292114138603 MULTI CID FTMS 0 0 0 15131 537157.375 0.3390041515052904 2 -0.1943588256835937 8 Unmodified _TVTITGIVKV_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 18.373094154950223 0.5392593366289069 4 {[TV]|[{I|L}S]}T{I|L}T{[VA]|[{I|L}G]}V 8 2 48.148 0.0 0.0 4.6762 0.0 0.0 0.0 242.15151392154533 242.15151392154533 21.46591250700361 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[TV]|[{I|L}S]}T{I|L}T{[VA]|[{I|L}G]}V 4.6762 + + 89 + 1 1.275 36687.5 1.0 10234 4903 15131 HBL1_DMSO_200M_050219_2,15139 HBL1_DMSO_200M_050219_2,15139,TVTITGIVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15140 79.679 61.0 663630.0 25 0 78791.0 + 14090 ALVDQRELYL 10 65 609.8528450257742 1217.6911371183485 2 610.3604614138603 MULTI CID FTMS 0 0 0 15131 495647.875 0.6542130489598534 -1 0.1393890380859375 9 Unmodified _IAPRATITGYR_ ENST00000561840.1_2_16:88923580-88926055:+|nuORF;ENST00000565309.1_1_16:88925068-88926212:+|nuORF;ENSG00000167515|ENST00000696289|TRAPPC2L;ENST00000564547.1_1_16:88923507-88925305:+|nuORF;nc|ENSG00000167515|Q9UL33|TRAPPC2L 5.731851221503515 0.8481046878870278 4 VDH{I|L}V 5 10 16.031 0.0 0.0 1.3165 0.0 0.0 183.14642885456152 468.1925142877563 651.3389431423178 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VDH{I|L}V 1.3165 - 58 + 1 1.275 39242.7 1.0 10235 4903 15131 HBL1_DMSO_200M_050219_2,15140 HBL1_DMSO_200M_050219_2,15140,IAPRATITGYR False False ALVDQRELYL 79.67947 610.36046141386 889462.5 15131.0 ENST00000561840.1_2_16:88923580-88926055:+|nuORF;;ENST00000565309.1_1_16:88925068-88926212:+|nuORF;;ENSG00000167515|ENST00000696289|TRAPPC2L;;ENST00000564547.1_1_16:88923507-88925305:+|nuORF;;nc|ENSG00000167515|Q9UL33|TRAPPC2L 4.101392507553101 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15141 79.685 274.0 409070.0 25 0 61102.0 + 4411 DAVRLINI 8 135 457.2767850690808 912.5390172049616 2 457.2772094607353 MULTI CID FTMS 0 0 0 15131 484415.4375 1.0 0 0.0 10 Unmodified _DAVRLINI_ ENSG00000113593|ENST00000261308|PPWD1;ENST00000511334.1_1_5:64872783-64879053:+|nuORF;nc|ENSG00000113593|Q96BP3-2|PPWD1 39.94969957227396 0.2351327405675156 4 {[DA]|[EG]}VR{I|L}{I|L}N{I|L} 8 0 + 51.904 0.0 0.0 5.6879 5.6879 85.225 0.0 0.0 0.0 10.97229849273171 13.399480616943508 10.97229849273171 9.262137858390815 0 1.1549471895720984 2.0 0.0 0.0 + + {[DA]|[EG]}VR{I|L}{I|L}N{I|L};{[DA]|[EG]}VR{I|L}{I|L}GG{I|L};{NN|[MP]|[D{I|L}]|[EV]}GR{I|L}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}GR{I|L}{I|L}GG{I|L};{[VA]|[{I|L}G]}DR{I|L}{I|L}N{I|L};{[QN]|[E{I|L}]|[KN]}[KA]{I|L}{I|L}N{I|L};{[QN]|[E{I|L}]|[KN]}RR{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[R{I|L}]VAD{I|L};{[SA]|[TG]}G{I|L}[R{I|L}][PS]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[R{I|L}]VW{I|L} 5.6879;4.6729;4.4855;3.4705;2.8468;2.8041;2.4316;1.892;1.8625;1.8493 +;-;-;-;-;-;-;-;-;- + 587 1 1.275 90148.2 1.0 10236 4903 15131 HBL1_DMSO_200M_050219_2,15141 HBL1_DMSO_200M_050219_2,15141,DAVRLINI False True DAVRLINI 79.684514 457.277209460735 3204384.0 15131.0 ENSG00000113593|ENST00000261308|PPWD1;;ENST00000511334.1_1_5:64872783-64879053:+|nuORF;;nc|ENSG00000113593|Q96BP3-2|PPWD1 4.197374979654948 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15142 79.686 62.0 848850.0 25 0 85738.0 + 26234 NQITQLESL 9 100 523.2796756405314 1044.5447983478628 2 523.2803832888603 MULTI CID FTMS 0 0 0 15131 400614.0625 0.0721318967178078 -3 0.3255844116210937 11 Unmodified _NQITQLESL_ ENSG00000138180|ENST00000371485|CEP55;ENST00000496302.1_1_10:95278654-95279576:+|nuORF 41.8396318013385 0.0653578398400075 4 {I|L}QTHS{I|L} 6 5 57.428 0.0 0.0 5.4979 0.0 0.0 347.170788193369 0.0 347.170788193369 0.0 45.758884703078735 0.0 0.0 0 0.5 0.0 1.1989700043360187 0.3807196863200844 {I|L}QTHS{I|L} 5.4979 - 366 + 1 1.275 46784.3 1.0 10237 4903 15131 HBL1_DMSO_200M_050219_2,15142 HBL1_DMSO_200M_050219_2,15142,NQITQLESL True True NQITQLESL 79.686047 523.28038328886 94582528.0 15131.0 ENSG00000138180|ENST00000371485|CEP55;;ENST00000496302.1_1_10:95278654-95279576:+|nuORF 4.828072230021159 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15143 79.69 198.0 522560.0 25 0 69442.0 + 18347 KVLGIVVGV 9 119 442.3020746614012 882.5895963896024 2 442.3022338747978 MULTI CID FTMS 0 0 0 15131 385251.71875 0.3365317262722988 -1 0.1393890380859375 12 Unmodified _KVLGIVVGV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 42.09456458481378 0.0639583784996157 4 [VG]{I|L}{I|L}KVVGV 9 3 + 65.838 0.0 0.0 7.4596 7.4596 84.328 0.0 0.0 0.0 3.979400086720375 9.889917747712644 3.979400086720375 3.979400086720375 0 1.5994850021680094 1.6989700043360187 0.0 0.0 [VG]{I|L}{I|L}KVVGV;VVA{I|L}KVVGV;[VG]{I|L}{I|L}VKVGV;[VG]{I|L}V{I|L}KVGV;[{I|L}V]G{I|L}KVVGV;[VG]{I|L}VK{I|L}VGV;VVA{I|L}VKVGV;[{I|L}V]AVKVVGV;VVAV{I|L}KVGV;[VG]V{I|L}{I|L}KVGV 7.4596;7.0088;6.4089;6.0679;6.0512;5.9581;5.9581;5.8517;5.617;5.5273 -;-;-;-;-;-;-;-;-;- 720 1 1.275 83915.4 1.0 10238 4903 15131 HBL1_DMSO_200M_050219_2,15143 HBL1_DMSO_200M_050219_2,15143,KVLGIVVGV True True KVLGIVVGV 79.689822 442.302233874798 6197474.5 15131.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 3.1974267959594727 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15144 79.699 492.0 196800.0 25 0 50015.0 -1 TLLCPTFAKR 10 128 603.8364674078923 1205.6583818825843 2 603.8373901247978 MULTI CID FTMS 0 0 0 15131 372531.65625 0.9103949640497098 -1 0.1393890380859375 13 Carbamidomethyl (C) _TLLC(Carbamidomethyl (C))PTFAKR_ ENST00000480456.5_1_21:27087017-27087155:+|nuORF 9.38312468134398 0.6832340498775793 4 [VP]VSGM{I|L}T{I|L} 9 -1 56.206 0.0 0.0 4.6618 0.0 0.0 0.0 305.1341258613533 305.1341258613533 28.593313839463207 0.0 0.0 0.0 0 0.4247425010840047 0.7695510786217261 0.805462187404089 0.0 [VP]VSGM{I|L}T{I|L} 4.6618 - 1316 1 1.275 73652.4 1.0 10239 4903 15131 HBL1_DMSO_200M_050219_2,15144 HBL1_DMSO_200M_050219_2,15144,TLLCPTFAKR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15145 79.701 101.0 420330.0 25 0 38887.0 + 34344 SLSPLKVMV 9 75 487.2902572083949 972.5659614835896 2 487.2920104861259 MULTI CID FTMS 0 0 0 15131 362232.375 0.3303660880608687 2 -0.1943588256835937 14 Unmodified _SLSPLKVMV_ REV__ENST00000437679.2_2:110663464-110663506:+|nuORF 20.453626601364224 0.2830276176381075 4 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}VVVMV 9 -1 + 51.347 0.0 0.0 5.2795 5.2795 80.973 0.0 0.0 0.0 8.322646798160562 9.577570906191896 8.322646798160562 8.322646798160562 0 0.7429928190999391 1.6989700043360187 0.5554621874040891 0.0 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}VVVMV;{NN|[MP]|[D{I|L}]|[EV]}[KA]VVVMV;{[QN]|[E{I|L}]|[KN]}[KG]VVVMV;{[QN]|[E{I|L}]|[KN]}[RK]VVMV;{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]RRMV 5.2795;4.4238;2.7158;2.0497;1.3143 -;-;-;-;- 70 1 1.275 38082.6 1.0 10240 4903 15131 HBL1_DMSO_200M_050219_2,15145 HBL1_DMSO_200M_050219_2,15145,SLSPLKVMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15146 79.706 280.0 398720.0 25 0 45793.0 + 942 AFIQSANLV 9 134 481.76835899319485 0 481.7690002322197 PEAK CID FTMS 0 0 0 15131 325422.6875 0.9464274418648614 -1 0.1393890380859375 15 Unmodified _AFIQSANLV_ ENSG00000169981|ENST00000396056|ZNF35 34.10243960390752 0.0907105591560806 4 AA{I|L}MN 5 6 34.087 0.0 0.0 3.5451 0.0 0.0 344.20320462837816 114.05667291812732 458.2598775465055 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 1.4802046884880935 AA{I|L}MN 3.5451 - 470 + 1 1.275 89505.0 1.0 10241 4903 15131 HBL1_DMSO_200M_050219_2,15146 HBL1_DMSO_200M_050219_2,15146,AFIQSANLV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15147 79.715 549.0 224960.0 25 0 34294.0 + 45872 YYQYMETYM 9 144 646.2540491842138 1290.4935454352276 2 646.2531616091728 MULTI CID FTMS 0 0 0 15131 281293.21875 1.0 0 0.0 16 Unmodified _YYQYMETYM_ ENSG00000108424|ENST00000290158|KPNB1;nc|ENSG00000108424|Q14974-2|KPNB1 23.1484247019978 0.2366544122328345 4 YYQYM 5 4 24.693 0.0 0.0 1.9134 0.0 0.0 0.0 539.1826683202463 539.1826683202463 -4.235162698957282 0.0 -4.235162698957282 0.0 0 0.0 1.6989700043360187 0.0 0.0 + YYQYM 1.9134 + + 1193 1 1.275 94659.7 1.0 10242 4903 15131 HBL1_DMSO_200M_050219_2,15147 HBL1_DMSO_200M_050219_2,15147,YYQYMETYM False True YYQYMETYM 79.715487 646.253161609173 2208791.25 15131.0 ENSG00000108424|ENST00000290158|KPNB1;;nc|ENSG00000108424|Q14974-2|KPNB1 6.436902523040772 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15148 79.726 572.0 239010.0 25 0 14359.0 + 35039 DALWPPPDRV 10 166 582.8317761250731 1163.6489993169462 2 583.3328735232353 MULTI CID FTMS 0 0 0 15131 266808.90625 0.9048360950741408 -1 0.1393890380859375 17 Unmodified _SQRLPHARSI_ ENSG00000111196|ENST00000320756|MAGOHB;ENST00000537852.5_1_12:10762420-10766167:-|nuORF;ENSG00000162385|ENST00000371470|MAGOH;ENST00000462941.1_1_1:53699171-53704129:-|nuORF 8.745405648335112 0.6861838735306406 4 {[DA]|[EG]}{I|L}WVVT 7 9 22.879 0.0 0.0 1.9662 0.0 0.0 0.0 376.2047603855587 376.2047603855587 5.096373105057559 0.0 0.0 0.0 0 0.0 0.6575773191777937 0.5 0.0 {[DA]|[EG]}{I|L}WVVT 1.9662 - 3474 1 1.275 105183.8 1.0 10243 4903 15131 HBL1_DMSO_200M_050219_2,15148 HBL1_DMSO_200M_050219_2,15148,SQRLPHARSI False False DALWPPPDRV 79.725518 582.8319 672979.0 15131.0 ENSG00000111196|ENST00000320756|MAGOHB;;ENST00000537852.5_1_12:10762420-10766167:-|nuORF;;ENSG00000162385|ENST00000371470|MAGOH;;ENST00000462941.1_1_1:53699171-53704129:-|nuORF 5.169232209523519 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15149 79.736 612.0 217950.0 25 0 12388.0 + 2888 AVFDDDMEQL 10 175 591.7534022982062 1181.4922516632123 2 591.7521850466728 MULTI CID FTMS 0 0 0 15131 240197.984375 0.9192123987562114 -1 0.1393890380859375 18 Unmodified _AVFDDDMEQL_ ENSG00000074054|ENST00000696935|CLASP1;ENST00000472776.1_1_2:122122630-122145458:-|nuORF;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1 30.63653989081413 0.2803493085145199 4 {[QN]|[E{I|L}]|[KN]}E[C(Carbamidomethyl (C))M]M 6 9 23.925 0.0 0.0 2.025 0.0 0.0 0.0 385.1736841185436 385.1736841185436 -3.2189467392571025 0.0 -3.2189467392571025 0.0 0 0.25 0.6020599913279624 0.75 0.0 {[QN]|[E{I|L}]|[KN]}E[C(Carbamidomethyl (C))M]M 2.025 - 1327 1 1.275 101564.9 1.0 10244 4903 15131 HBL1_DMSO_200M_050219_2,15149 HBL1_DMSO_200M_050219_2,15149,AVFDDDMEQL False True AVFDDDMEQL 79.736212 591.752185046673 2109379.75 15131.0 nc|ENSG00000074054|Q7Z460-5|CLASP1;;ENST00000472776.1_1_2:122122630-122145458:-|nuORF;;nc|ENSG00000074054|Q7Z460-4|CLASP1;;nc|ENSG00000074054|Q7Z460|CLASP1;;nc|ENSG00000074054|Q7Z460-3|CLASP1;;ENSG00000074054|ENST00000696935|CLASP1;;nc|ENSG00000074054|Q7Z460-2|CLASP1 6.565206209818522 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15150 79.748 612.0 254800.0 25 0 21680.0 + -1 ELMLSQSQMI 10 174 598.2860724372168 1194.5575919412336 2 598.2874633669853 MULTI CID FTMS 0 0 0 15131 227489.765625 0.7593693758631305 2 -0.1943588256835937 19 Oxidation (M) _ELM(Oxidation (M))LSQSQMI_ REV__ENSG00000173918|ENST00000579760|C1QTNF1;REV__ENST00000582625.1_1_17:77043224-77044167:+|nuORF;REV__nc|ENSG00000173918|Q9BXJ1-2|C1QTNF1 22.736283301280096 0.4578556481593033 4 VYPE[PS]{[NV]|[RG]}QY 10 -1 + 60.062 0.0 0.0 5.0279 5.0279 82.67 0.0 0.0 0.0 40.23304519995765 0.113168458567685 0.113168458567685 9.618449501357844 0 0.6747425010840047 2.0 0.0 0.5866968715561641 VYPE[PS]{[NV]|[RG]}QY;VYPE[{I|L}A][KC]C(Carbamidomethyl (C)){I|L};VYPE[PS]PYM{I|L};VYPEYDDVVP;VYPEYDDVPV;VYPE[PS]PY{M(Oxidation (M))|F}P;VYPQQ[C(Carbamidomethyl (C))K]C(Carbamidomethyl (C)){I|L};VYPE[PS]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L};VYPQQ[WM]M{I|L};VYYPEDDVVP 5.0279;4.2228;4.1486;4.0039;3.8881;3.7492;3.5948;3.4943;3.3022;2.9099 -;-;-;-;-;-;-;-;-;- 1356 + 1 1.275 117097.8 1.0 10245 4903 15131 HBL1_DMSO_200M_050219_2,15150 HBL1_DMSO_200M_050219_2,15150,ELMLSQSQMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15151 79.76 713.0 416060.0 25 0 49036.0 + 9972 FPGSGPPLQ 9 202 450.234321178822 898.4540894244441 2 450.2348205447197 MULTI CID FTMS 0 0 0 15131 217278.109375 0.3830309440370095 -2 0.1980743408203125 20 Unmodified _FPGSGPPLQ_ REV__ENST00000463814.1_1_7:143815556-143816108:-|nuORF 24.67388899826682 0.2172451872415813 4 C(Carbamidomethyl (C))PP{I|L} 4 -1 24.53 0.0 0.0 2.7303 0.0 0.0 413.2267934331963 0.0 413.2267934331963 0.0 -2.4793849162218784 -2.4793849162218784 0.0 0 0.3807196863200844 0.0 0.0 0.0 C(Carbamidomethyl (C))PP{I|L} 2.7303 - 1027 + 1 1.275 224199.9 1.0 10246 4903 15131 HBL1_DMSO_200M_050219_2,15151 HBL1_DMSO_200M_050219_2,15151,FPGSGPPLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15153 79.765 8.7 4757800.0 25 0 298910.0 + 43136 VYPEYVIQY 9 79 587.2949481527189 1172.5753433722375 2 587.2952148318291 MULTI CID FTMS 0 0 0 15152 4849306.0 0.3183150492602317 3 -0.3207626342773437 1 Unmodified _VYPEYVIQY_ ENSG00000059378|ENST00000263549|PARP12 34.10243960390752 0.1078313939113124 4 [YE]PVVY 6 5 31.911 0.0 0.0 2.7215 0.0 0.0 0.0 419.19060092702233 419.19060092702233 13.927900303521312 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 [YE]PVVY 2.7215 - 198 1 1.254 38113.0 1.0 10247 4904 15152 HBL1_DMSO_200M_050219_2,15153 HBL1_DMSO_200M_050219_2,15153,VYPEYVIQY True True VYPEYVIQY 79.764638 587.295214831829 369694688.0 15152.0 ENSG00000059378|ENST00000263549|PARP12 7.559913953145345 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15154 79.766 9.3 4550300.0 25 0 605600.0 + -1 VWHVGLMGNI 10 64 571.2931989249637 1140.5718449167273 2 571.2928954958916 MULTI CID FTMS 0 0 0 15152 4399469.0 0.4583158318894642 -1 0.0959854125976562 2 Oxidation (M) _VWHVGLM(Oxidation (M))GNI_ REV__ENST00000375888.5_1_10:27520720-27524054:-|nuORF 10.823927491677226 0.6659270209832991 4 PV{[QG]|[NA]} 4 -1 21.198 0.0 0.0 1.8585 0.0 0.0 741.3663807599625 0.0 741.3663807599625 0.0 9.604093769761874 0.0 0.0 0 0.5 0.0 0.0 0.0 PV{[QG]|[NA]} 1.8585 - 25 1 1.254 40687.4 1.0 10248 4904 15152 HBL1_DMSO_200M_050219_2,15154 HBL1_DMSO_200M_050219_2,15154,VWHVGLMGNI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15155 79.767 25.0 1627400.0 25 0 125030.0 + + 7997 YSVDRLYEL 9 68 579.2750681744855 1156.5355834157708 2 579.2746459841728 MULTI CID FTMS 0 0 0 15152 1570726.75 0.4751949553409966 -1 0.0959854125976562 3 Unmodified _EMHIVQCLNA_ ENSG00000084774|ENST00000264705|CAD 8.745405648335112 0.6861838735306406 4 {I|L}{[QG]|[NA]} 3 -1 15.458 0.0 0.0 1.3365 0.0 0.0 840.3738012024271 0.0 840.3738012024271 0.0 0.9936247538460936 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{[QG]|[NA]} 1.3365 + + 30 1 1.254 35128.7 1.0 10249 4904 15152 HBL1_DMSO_200M_050219_2,15155 HBL1_DMSO_200M_050219_2,15155,EMHIVQCLNA False False YSVDRLYEL 79.766995 579.274645984173 2682790.5 15152.0 ENSG00000084774|ENST00000264705|CAD 0.6665063500404358 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15156 79.768 26.0 2091800.0 25 0 303850.0 + 13555 HPFPGPGLAI 10 87 503.2793035367612 1004.5440541403224 2 503.2799255251884 MULTI CID FTMS 0 0 0 15152 1414317.5 0.6346172398552464 -2 0.2353744506835937 4 Unmodified _HPFPGPGLAI_ ENSG00000163655|ENST00000496455|GMPS;nc|ENSG00000163655|P49915-2|GMPS 32.116972079565 0.2470863257317063 4 E{I|L}A{I|L} 4 7 37.339 0.0 0.0 3.717 0.0 0.0 560.298143455275 0.0 560.298143455275 0.0 22.73509716672216 0.0 0.0 0 0.4247425010840047 0.0 0.805462187404089 0.0 E{I|L}A{I|L} 3.717 - 140 1 1.254 47044.9 1.0 10250 4904 15152 HBL1_DMSO_200M_050219_2,15156 HBL1_DMSO_200M_050219_2,15156,HPFPGPGLAI False True HPFPGPGLAI 79.768174 503.279925525188 84916644.0 15152.0 nc|ENSG00000163655|P49915-2|GMPS;;ENSG00000163655|ENST00000496455|GMPS 5.457650025685628 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15157 79.769 39.0 1390900.0 25 0 161990.0 + 37307 TIRYPDPLI 9 88 544.3110889334554 1086.607624933711 2 544.3113281130791 MULTI CID FTMS 0 0 0 15152 1118303.125 0.0720917199703176 -5 0.5967788696289062 5 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 49.55428908609986 0.0413471690215031 4 [{I|L}T]RY[DP]P{I|L}{I|L} 9 0 + 62.263 0.0 0.0 5.73 5.73 81.819 0.0 0.0 0.0 20.737862141609185 46.77855164258615 20.737862141609185 6.989700043360188 0 1.4436726795685342 2.0 0.8494850021680094 0.0 + + [{I|L}T]RY[DP]P{I|L}{I|L};[{I|L}T][WM][{I|L}T]P{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RD][{I|L}T]P{I|L}{I|L};[DP][YR][{I|L}T]P{I|L}{I|L};[{I|L}P]{[ET]|[MV]}{I|L}{M(Oxidation (M))|F}{I|L}[RV] 5.73;5.0868;3.4786;3.0866;0.3787 +;-;-;-;- + 207 1 1.254 51922.4 1.0 10251 4904 15152 HBL1_DMSO_200M_050219_2,15157 HBL1_DMSO_200M_050219_2,15157,TIRYPDPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15158 79.771 56.0 1801500.0 25 0 195310.0 + -1 LLVKICQL 8 126 493.8054435747275 985.5963342162552 2 493.8051635622978 MULTI CID FTMS 0 0 0 15152 1072728.0 0.3119420722378438 3 -0.3207626342773437 6 Carbamidomethyl (C) _LLVKIC(Carbamidomethyl (C))QL_ REV__ENST00000483122.1_1_10:114210316-114210400:+|nuORF 19.438996006549623 0.6237395211498085 4 {I|L}{I|L}V[HA]{I|L}{I|L} 7 -1 31.571 0.0 0.0 3.2033 0.0 0.0 0.0 223.0730379693969 223.0730379693969 1.2168754647011326 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}V[HA]{I|L}{I|L} 3.2033 - 633 + 1 1.254 79715.4 1.0 10252 4904 15152 HBL1_DMSO_200M_050219_2,15158 HBL1_DMSO_200M_050219_2,15158,LLVKICQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15159 79.772 66.0 913570.0 25 0 107660.0 + 4349 DASLVFKV 8 82 439.7525915049388 877.4906300766776 2 439.7526122927666 MULTI CID FTMS 0 0 0 15152 868396.75 0.0817688300648277 3 -0.3207626342773437 7 Unmodified _DASLVFKV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602816-23603164:-|nuORF 54.773552608820026 0.1167943196628344 4 {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV 8 0 + 70.1 0.0 0.0 7.9887 7.9887 97.41 0.0 0.0 0.0 46.22608801015147 11.8943306386236 11.8943306386236 70.10003799480572 0 1.0994850021680094 2.0 0.0 0.0 + + {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV 7.9887 + + 108 + 1 1.254 54469.6 1.0 10253 4904 15152 HBL1_DMSO_200M_050219_2,15159 HBL1_DMSO_200M_050219_2,15159,DASLVFKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15160 79.774 48.0 1069900.0 25 0 83760.0 + 44936 YPPWPGKIV 9 73 528.7980860103809 1055.5816190875616 2 528.7974120974541 MULTI CID FTMS 0 0 0 15152 857811.0625 0.0752344017363504 -16 1.70758056640625 8 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 42.09456458481378 0.0639583784996157 4 YPPWP 5 4 55.222 0.0 0.0 5.2314 0.0 0.0 0.0 412.2578219049438 412.2578219049438 38.610921311779336 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + YPPWP 5.2314 + + 196 + 1 1.254 51684.9 1.0 10254 4904 15152 HBL1_DMSO_200M_050219_2,15160 HBL1_DMSO_200M_050219_2,15160,YPPWPGKIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15161 79.775 60.0 645010.0 25 0 93678.0 + -1 IRCLVLKQF 9 48 609.8528450257742 1217.6911371183485 2 609.8548461794853 MULTI CID FTMS 0 0 0 15152 836370.8125 0.961724578725945 -1 0.0959854125976562 9 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))IRC(Carbamidomethyl (C))LVLKQF_ REV__ENST00000542958.5_1_12:64818921-64818954:+|nuORF 1.844237919475145 0.850302753031785 4 {M(Oxidation (M))|F} 1 -1 10.596 0.0 0.0 0.87017 0.0 0.0 1052.6122472031122 0.0 1052.6122472031122 0.0 5.903194434032012 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.87017 + + 14 + 1 1.254 37645.8 1.0 10255 4904 15152 HBL1_DMSO_200M_050219_2,15161 HBL1_DMSO_200M_050219_2,15161,IRCLVLKQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15162 79.777 67.0 990560.0 25 0 217990.0 -1 LLYICVCSV 9 71 563.7847175920814 0 563.7838622927666 PEAK CID FTMS 0 0 0 15152 786231.75 0.5153588701629293 -1 0.0959854125976562 10 2 Carbamidomethyl (C) _LLYIC(Carbamidomethyl (C))VC(Carbamidomethyl (C))SV_ ENST00000261489.6_2_13:45008072-45008132:-|nuORF 23.1484247019978 0.1725298825155634 4 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}DG 6 -1 35.138 0.0 0.0 3.1218 0.0 0.0 339.0875493425627 125.07271753482657 464.1602668773892 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.8494850021680094 0.0 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}DG 3.1218 - 87 + 1 1.254 54379.8 1.0 10256 4904 15152 HBL1_DMSO_200M_050219_2,15162 HBL1_DMSO_200M_050219_2,15162,LLYICVCSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15163 79.778 66.0 863540.0 25 0 119330.0 + 15846 KSPEGFFQV 9 91 519.7667058326615 1037.518858732123 2 519.7668334841728 MULTI CID FTMS 0 0 0 15152 596698.3125 0.5166451198836312 -1 0.0959854125976562 11 Unmodified _ISMGSAVFAGV_ ENSG00000158481|ENST00000368170|CD1C 36.12702656103203 0.2720571796884491 4 {[TV]|[{I|L}S]}VCDK{M(Oxidation (M))|F}QV 9 7 + 70.601 0.0 0.0 6.8048 6.8048 79.966 0.0 0.0 0.0 2.703037561203842 16.478174818886373 2.703037561203842 2.703037561203842 0 0.6549471895720985 1.5228787452803376 1.1989700043360187 0.0 {[TV]|[{I|L}S]}VCDK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}SK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[RN]{M(Oxidation (M))|F}QV;{[TV]|[{I|L}S]}VCDK{M(Oxidation (M))|F}[AG]V;[DP]A{M(Oxidation (M))|F}SK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}SK{M(Oxidation (M))|F}[AG]V;{NN|[MP]|[D{I|L}]|[EV]}[RN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QV;[EP]G{M(Oxidation (M))|F}SK{M(Oxidation (M))|F}QV;{[QS]|[NT]}{[QS]|[NT]}SK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[RN]QV 6.8048;6.5442;5.9198;5.9172;5.678;5.6567;5.46;5.4201;5.241;5.2203 -;-;-;-;-;-;-;-;-;- 368 1 1.254 50323.1 1.0 10257 4904 15152 HBL1_DMSO_200M_050219_2,15163 HBL1_DMSO_200M_050219_2,15163,ISMGSAVFAGV False False KSPEGFFQV 79.77837 519.766833484173 19111646.0 15152.0 ENSG00000158481|ENST00000368170|CD1C 3.8131823539733887 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15164 79.786 445.0 647060.0 25 0 108670.0 + 9140 FFRGSDCL 8 167 472.7172508482757 943.4199487633514 2 472.7180358767509 MULTI CID FTMS 0 0 0 15152 489974.21875 0.6869406155907624 -1 0.0959854125976562 12 Unmodified _FFRGSDCL_ REV__ENST00000401707.6_1_8:99170297-99170378:+|nuORF 6.354104778181461 0.7857632046190106 4 {I|L} 1 -1 11.99 0.0 0.0 1.2709 0.0 0.0 812.3248997904983 0.0 812.3248997904983 0.0 0.2069634257911268 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2709 + + 245 + 1 1.254 221261.7 1.0 10258 4904 15152 HBL1_DMSO_200M_050219_2,15164 HBL1_DMSO_200M_050219_2,15164,FFRGSDCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15165 79.79 169.0 587590.0 25 0 57808.0 + 21810 LPNIPVQTI 9 114 497.8003569917111 993.586161050222 2 497.8002197146416 MULTI CID FTMS 0 0 0 15152 492910.96875 0.157413371280108 -5 0.5967788696289062 13 Unmodified _LPNIPVQTI_ ENSG00000072274|ENST00000360110|TFRC 52.268347100219714 0.0353964759249114 4 [{I|L}P]N{I|L}PVQT{I|L} 9 0 + 52.475 0.0 0.0 5.2814 5.2814 71.31 0.0 0.0 0.0 4.60730838531493 10.330145895351848 4.60730838531493 1.249387366082999 0 1.0924778212679485 1.2218487496163564 0.0 0.0 + + [{I|L}P]N{I|L}PVQT{I|L};[{I|L}P]GG{I|L}PVQT{I|L};[{I|L}P]N{I|L}PN{I|L}T{I|L};[{I|L}P]GG{I|L}PN{I|L}T{I|L};[VP]Q{I|L}PVQT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PVQT{I|L};[VP]AG{I|L}PVQT{I|L};{I|L}{I|L}[NP]PVQT{I|L};[VP]Q{I|L}PN{I|L}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P{I|L}PN{I|L}T{I|L} 5.2814;5.1556;5.1041;4.9784;4.8176;4.7551;4.6919;4.6576;4.6404;4.5779 +;-;-;-;-;-;-;-;-;- + 1203 1 1.254 79836.7 1.0 10259 4904 15152 HBL1_DMSO_200M_050219_2,15165 HBL1_DMSO_200M_050219_2,15165,LPNIPVQTI True True LPNIPVQTI 79.789572 497.800219714642 40227104.0 15152.0 ENSG00000072274|ENST00000360110|TFRC 3.598147710164388 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15166 79.801 645.0 604470.0 25 0 157300.0 + 53 AACSERGPGP 10 173 315.48099590441234 943.421158313437 3 315.4807617068291 MULTI CID FTMS 0 0 0 15152 297720.59375 0.4427427125428368 -2 0.2353744506835937 14 Unmodified _AACSERGPGP_ REV__ENST00000476089.1_1_2:182321937-182323202:+|nuORF 3.944395688203298 0.708391353636983 4 {I|L}S 2 -1 21.229 0.0 0.0 2.2503 0.0 0.0 0.0 740.2615773162698 740.2615773162698 9.992369838338462 0.0 0.0 0.0 0 0.4247425010840047 0.2518119729937995 0.0 0.0 {I|L}S 2.2503 - 31 + 1 1.254 307965.4 1.0 10260 4904 15152 HBL1_DMSO_200M_050219_2,15166 HBL1_DMSO_200M_050219_2,15166,AACSERGPGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15167 79.812 662.0 521290.0 25 0 35489.0 + 30372 RALKLIIRL 9 153 365.92917395278806 1094.7656924585642 3 365.9291869997978 MULTI CID FTMS 0 0 0 15152 285267.6875 1.0 0 0.0 15 Unmodified _RALKLIIRL_ ENSG00000133318|ENST00000377819|RTN3;nc|ENSG00000133318|O95197-2|RTN3;nc|ENSG00000133318|O95197-3|RTN3;nc|ENSG00000133318|O95197-4|RTN3;nc|ENSG00000133318|O95197-5|RTN3;nc|ENSG00000133318|O95197-7|RTN3 65.47368725323818 0.0230515101691092 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K{I|L}{I|L}{I|L}R{I|L} 9 0 + 56.349 0.0 0.0 5.1471 5.1471 76.602 0.0 0.0 0.0 4.553337107899374 6.521015176533211 4.553337107899374 4.553337107899374 0 2.313991983191239 0.0 0.0 0.9386218330464626 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K{I|L}{I|L}{I|L}R{I|L};[R{I|L}]AK{I|L}{I|L}{I|L}R{I|L};{I|L}{I|L}R[KA]{I|L}{I|L}R{I|L};[K{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}{I|L}R{I|L};[R{I|L}]{I|L}[KA]{I|L}{I|L}R{I|L};{I|L}{I|L}R{I|L}[KA]{I|L}R{I|L};[R{I|L}]{I|L}{I|L}[KA]{I|L}R{I|L} 5.1471;4.7312;3.1676;2.8034;1.6936;1.6355;0.16152 +;-;-;-;-;-;- + 345 1 1.254 276244.4 1.0 10261 4904 15152 HBL1_DMSO_200M_050219_2,15167 HBL1_DMSO_200M_050219_2,15167,RALKLIIRL True True RALKLIIRL 79.812316 365.929186999798 2027917.0 15152.0 nc|ENSG00000133318|O95197-3|RTN3;;nc|ENSG00000133318|O95197-7|RTN3;;ENSG00000133318|ENST00000377819|RTN3;;nc|ENSG00000133318|O95197-4|RTN3;;nc|ENSG00000133318|O95197-5|RTN3;;nc|ENSG00000133318|O95197-2|RTN3 4.45151933034261 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15168 79.822 549.0 150640.0 25 0 29908.0 + 5122 DIFFIKIIIEF 11 111 699.4081494644868 1396.8017459957734 2 699.4097778201103 MULTI CID FTMS 0 0 0 15152 279952.625 0.8357091795893119 -3 0.2940597534179687 16 Unmodified _DIFFIKIIIEF_ REV__ENSG00000127337|ENST00000247843|YEATS4 2.9952420565917617 0.861016188266951 4 {I|L} 1 -1 9.2694 0.0 0.0 0.66361 0.0 0.0 1265.7065596938187 0.0 1265.7065596938187 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.66361 + + 52 + 1 1.254 72466.8 1.0 10262 4904 15152 HBL1_DMSO_200M_050219_2,15168 HBL1_DMSO_200M_050219_2,15168,DIFFIKIIIEF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15169 79.823 60.0 1061200.0 25 0 125340.0 41720 VPSSKQLQQS 10 98 551.2974945404904 0 551.2962524294853 PEAK CID FTMS 0 0 0 15152 256739.015625 1.0 0 0.0 17 Unmodified _VPSSKQLQQS_ nc|ENSG00000140326|Q8IWY9-1|CDAN1 16.149105407346934 0.3281668441439271 4 {I|L}T{I|L}VPC(Carbamidomethyl (C))E 7 10 24.985 0.0 0.0 2.2701 0.0 0.0 203.08230060156887 82.06701074771718 285.14931134928605 0.0 0.0 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 {I|L}T{I|L}VPC(Carbamidomethyl (C))E 2.2701 - 1093 + 1 1.254 54774.6 1.0 10263 4904 15152 HBL1_DMSO_200M_050219_2,15169 HBL1_DMSO_200M_050219_2,15169,VPSSKQLQQS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 15170 79.835 619.0 283310.0 25 0 20626.0 + + 24064 YLNDLIHSV 9 206 537.2898621748571 0 537.2863647341728 PEAK CID FTMS 0 0 0 15152 216971.28125 0.1758630155806279 26 -2.8322830200195312 18 Unmodified _LYCLFSKSL_ ENSG00000108599|ENST00000225737|AKAP10 26.88365393820708 0.1386685954232994 4 RD{I|L}K 4 -1 23.448 0.0 0.0 2.1862 0.0 0.0 218.1292105784267 339.1321810358032 557.2613916142299 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.0 RD{I|L}K 2.1862 - 459 + 1 1.254 139796.0 1.0 10264 4904 15152 HBL1_DMSO_200M_050219_2,15170 HBL1_DMSO_200M_050219_2,15170,LYCLFSKSL False False YLNDLIHSV 79.835453 537.286364734173 1165932.75 15152.0 ENSG00000108599|ENST00000225737|AKAP10 5.201340516408284 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15171 79.846 598.0 328830.0 25 0 29502.0 + 43868 YFNDIAVGAV 10 199 534.7715045969544 1067.5284562607087 2 534.7744628787041 MULTI CID FTMS 0 0 0 15152 224346.375 0.4034418543069878 -1 0.0959854125976562 19 Unmodified _YFNDIAVGAV_ ENSG00000121579|ENST00000240922|NAA50 53.832793166522166 0.0576554960245129 4 [AG]T{M(Oxidation (M))|F}Y{I|L}ARAV 10 7 + 31.895 0.0 0.0 2.9878 2.9878 64.301 0.0 0.0 0.0 2.680131267973934 4.366967116263727 2.680131267973934 1.7609125905568064 0 1.0924778212679485 1.0969100130080565 0.2396518287104437 0.0 [AG]T{M(Oxidation (M))|F}Y{I|L}ARAV;[AG]T{M(Oxidation (M))|F}YA{I|L}RAV;[Y{M(Oxidation (M))|F}]ND{I|L}ARAV;[DN]{M(Oxidation (M))|F}Y{I|L}ARAV;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))H]{I|L}ARAV;{[QV]|[N{I|L}]|[RA]|[KV]}AD[Y{M(Oxidation (M))|F}]RAV;[AG]VAD[Y{M(Oxidation (M))|F}]RAV;[Y{M(Oxidation (M))|F}]NDA{I|L}RAV;[DN]{M(Oxidation (M))|F}YA{I|L}RAV;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))H]A{I|L}RAV 2.9878;2.8228;2.7367;2.7169;2.6691;2.6117;2.5771;2.5718;2.5519;2.5041 -;-;-;-;-;-;-;-;-;- 7231 1 1.254 156783.1 1.0 10265 4904 15152 HBL1_DMSO_200M_050219_2,15171 HBL1_DMSO_200M_050219_2,15171,YFNDIAVGAV True True YFNDIAVGAV 79.845924 534.774462878704 4798245.0 15152.0 ENSG00000121579|ENST00000240922|NAA50 5.233259359995524 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15172 79.859 745.0 506000.0 25 0 102350.0 + 11054 GDKLLMWTY 9 254 376.1929764152865 1125.5570998460596 3 376.1921264529228 MULTI CID FTMS 0 0 0 15152 212321.625 0.3982618382258895 -1 0.0959854125976562 20 Unmodified _GDKLLMWTY_ REV__ENSG00000134242|ENST00000359785|PTPN22;REV__ENST00000484147.5_1_1:114375712-114414257:-|nuORF;REV__nc|ENSG00000134242|Q9Y2R2-2|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2-3|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2-4|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2|PTPN22 17.11289562659939 0.3734572693229295 4 [VG]SG{I|L}{M(Oxidation (M))|F}[YG]D{I|L}V 11 -1 + 38.727 0.0 0.0 3.4407 3.4407 64.965 0.0 0.0 0.0 1.4569395819891966 3.584622587345862 1.4569395819891966 1.4569395819891966 0 0.2742275032520141 1.6989700043360187 0.9456290139465234 0.0 [VG]SG{I|L}{M(Oxidation (M))|F}[YG]D{I|L}V;[DG]K{I|L}{M(Oxidation (M))|F}[YG]D{I|L}V;[VG]SG{M(Oxidation (M))|F}{I|L}[YG]D{I|L}V;[DG]K{M(Oxidation (M))|F}{I|L}[YG]D{I|L}V;[KG]D{I|L}{M(Oxidation (M))|F}[YG]D{I|L}V;[SG]VG{I|L}{M(Oxidation (M))|F}[YG]D{I|L}V;[VG]SG{I|L}{M(Oxidation (M))|F}C[MT]{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[KG]{M(Oxidation (M))|F}[YG]D{I|L}V;[DG]K{I|L}{M(Oxidation (M))|F}C[MT]{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}G{I|L}{M(Oxidation (M))|F}[YG]D{I|L}V 3.4407;3.3113;2.7982;2.6688;2.5549;2.4971;2.4819;2.4473;2.3525;2.3367 -;-;-;-;-;-;-;-;-;- 1982 1 1.254 293922.6 1.0 10266 4904 15152 HBL1_DMSO_200M_050219_2,15172 HBL1_DMSO_200M_050219_2,15172,GDKLLMWTY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15174 79.863 6.3 7966100.0 25 0 1180500.0 + 34904 SQIEADFRL 9 55 539.7801363315979 1077.5457197299957 2 539.7805053591728 MULTI CID FTMS 0 0 0 15173 7562238.0 0.471079483097176 2 -0.2223892211914062 1 Unmodified _SQIEADFRL_ ENSG00000198900|ENST00000361337|TOP1 41.95555342248728 0.0647214845423414 4 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}] 9 2 + 66.132 0.0 0.0 6.1373 6.1373 91.693 0.0 0.0 0.0 54.7116916703081 5.642492736872597 5.642492736872597 66.1316749521341 0 1.0 1.3010299956639813 0.4247425010840047 0.0 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}] 6.1373 - 71 + 1 1.242 42339.9 1.0 10267 4905 15173 HBL1_DMSO_200M_050219_2,15174 HBL1_DMSO_200M_050219_2,15174,SQIEADFRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15175 79.864 4.2 16483000.0 25 0 2687200.0 + 4637 DAYVLPKL 8 71 459.7682070317223 917.5218611302446 2 459.7685424685478 MULTI CID FTMS 0 0 0 15173 14754226.0 0.5573153871008659 -2 0.1943588256835937 2 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 32.30548876998284 0.3644845974844379 4 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 + 63.313 0.0 0.0 6.9005 6.9005 86.636 0.0 0.0 0.0 15.750481569446748 7.3788807036638815 7.3788807036638815 7.3788807036638815 0 1.1989700043360187 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L};{[DA]|[EG]}YV{I|L}{I|L}[KP] 6.9005;6.0963 +;- + 83 + 1 1.242 58789.2 1.0 10268 4905 15173 HBL1_DMSO_200M_050219_2,15175 HBL1_DMSO_200M_050219_2,15175,DAYVLPKL False True DAYVLPKL 79.86419 459.768542468548 1037304512.0 15173.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 6.573347568511963 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15176 79.865 16.0 2361000.0 25 0 280030.0 6008 DRYAAVCKPL 10 71 568.2978247350383 1134.5810965368764 2 568.2991210818291 MULTI CID FTMS 0 0 0 15173 2019537.875 0.7059565606280606 -1 0.0983734130859375 3 Unmodified _DRYAAVCKPL_ ENSG00000172365|ENST00000641342|OR5B2;ENSG00000172769|ENST00000641865|OR5B3;nc|ENSG00000168126|Q8NHA6|OR2W6P 6.2057823575117 0.6979311171683138 4 T{I|L}V 3 9 20.005 0.0 0.0 1.7632 0.0 0.0 334.1684511284764 484.18866907291255 818.357120201389 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T{I|L}V 1.7632 - 61 + 1 1.242 33584.0 1.0 10269 4905 15173 HBL1_DMSO_200M_050219_2,15176 HBL1_DMSO_200M_050219_2,15176,DRYAAVCKPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15177 79.867 49.0 1345700.0 25 0 194570.0 + 35782 SVIPVINKI 9 84 491.8183613547443 981.6221697762886 2 491.8185912966728 MULTI CID FTMS 0 0 0 15173 1118283.25 0.8432650144970157 -1 0.0983734130859375 4 Unmodified _SVIPVINKI_ ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF 61.357469665136826 0.0253304979873734 4 [VS]{I|L}PV{I|L}NK{I|L} 9 0 + 76.525 0.0 0.0 7.7958 7.7958 91.465 0.0 0.0 0.0 39.61401446528966 10.36220550087016 10.36220550087016 9.208187539523747 0 1.0 1.6989700043360187 0.0 1.0941876774005248 + + [VS]{I|L}PV{I|L}NK{I|L};[VS]{I|L}PV{I|L}GGK{I|L};[VS]{I|L}{I|L}[VP]NK{I|L};[VS]{I|L}{I|L}[VP]GGK{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[{I|L}T]{I|L}{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}K[{I|L}T]{I|L}{I|L}[PA] 7.7958;6.8577;5.3991;4.461;4.1946;3.3525 +;-;-;-;-;- + 247 + 1 1.242 55929.0 1.0 10270 4905 15173 HBL1_DMSO_200M_050219_2,15177 HBL1_DMSO_200M_050219_2,15177,SVIPVINKI True True SVIPVINKI 79.866671 491.818591296673 28733700.0 15173.0 ENST00000506793.5_1_4:44680541-44700695:+|nuORF;;ENSG00000151806|ENST00000281543|GUF1 4.060031414031982 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15178 79.868 44.0 1270700.0 25 0 134000.0 + 10036 FPNIHPPQI 9 96 531.7903472200135 1061.5661415068269 2 531.7909423708916 MULTI CID FTMS 0 0 0 15173 896804.25 0.6375267449128461 -3 0.3337478637695312 5 Unmodified _FPNIHPPQI_ ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-3|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 71.13359017698441 0.0206607516130725 4 {M(Oxidation (M))|F}PN{I|L}HP[QP]{I|L} 9 0 + 43.884 0.0 0.0 4.1339 4.1339 76.209 0.0 0.0 0.0 30.78517508538184 7.235834254131106 7.235834254131106 7.983777093069833 0 1.2786596949921218 0.0 0.0 1.079689690656103 + + {M(Oxidation (M))|F}PN{I|L}HP[QP]{I|L};{M(Oxidation (M))|F}PN{I|L}HP[PG]A{I|L};{[TV]|[{I|L}S]}[RP]H{I|L}NPE;{M(Oxidation (M))|F}P{[WT]|[RM]}P[KS]S{I|L};{M(Oxidation (M))|F}P{[WT]|[RM]}P[KS]TV;[KS]QQHP[QP]{I|L};[KS]A{[QG]|[NA]}HP[QP]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HT]GV[VP]PE;[Q{I|L}][HS]R[VP]PE;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV]VRHE 4.1339;3.3818;2.6512;2.3219;1.8294;1.4761;1.433;1.0569;1.0087;0.88273 +;-;-;-;-;-;-;-;-;- + 711 + 1 1.242 49451.1 1.0 10271 4905 15173 HBL1_DMSO_200M_050219_2,15178 HBL1_DMSO_200M_050219_2,15178,FPNIHPPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15179 79.871 142.0 1050500.0 25 0 130390.0 -1 0 96 336.1044863105572 670.1944196879144 2 336.1047851443291 MULTI CID FTMS 0 0 0 15173 746042.6875 0.1141148798053611 -2 0.1943588256835937 6 4 {[CP]|[EA]}S 3 -1 10.062 0.0 0.0 1.5013 0.0 0.0 0.0 380.0744531487562 380.0744531487562 6.082268588648249 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[CP]|[EA]}S 1.5013 - 12 + 1 1.242 121615.9 1.0 10272 4905 15173 HBL1_DMSO_200M_050219_2,15179 HBL1_DMSO_200M_050219_2,15179, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15180 79.877 353.0 555010.0 25 0 62346.0 15184 IPEDGLPPI 9 131 475.7635912955085 949.512629657817 2 475.7640563845634 MULTI CID FTMS 0 0 0 15173 641299.5625 1.0 0 0.0 7 Unmodified _IPEDGLPPI_ ENSG00000157077|ENST00000287727|ZFYVE9;nc|ENSG00000157077|O95405-2|ZFYVE9 30.22481116460888 0.1466181017706357 4 {[VA]|[{I|L}G]}AANPT 7 7 26.814 0.0 0.0 2.824 0.0 0.0 0.0 322.177887796742 322.177887796742 3.581915401378563 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[VA]|[{I|L}G]}AANPT 2.824 - 624 1 1.242 152106.3 1.0 10273 4905 15173 HBL1_DMSO_200M_050219_2,15180 HBL1_DMSO_200M_050219_2,15180,IPEDGLPPI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15181 79.883 326.0 804110.0 25 0 74208.0 + 26655 NYIDRFLSSM 10 175 631.2969722257485 1260.579391518297 2 631.2964965701103 MULTI CID FTMS 0 0 0 15173 628434.0 0.3582290425579897 -1 0.0983734130859375 8 Oxidation (M) _NYIDRFLSSM(Oxidation (M))_ ENSG00000145386|ENST00000274026|CCNA2 171.46415876497497 1.894166844859802e-09 4 [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F} 10 0 + 110.57 0.0 0.0 8.7713 8.7713 96.111 0.0 0.0 0.0 1.742340564755267 1.742340564755267 1.742340564755267 16.315500888238972 0 2.973197507588033 2.0 1.8441876774005248 0.0 + + [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F};[YN]{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}SS{M(Oxidation (M))|F};[YN]{I|L}{I|L}{[CA]|SS}M{I|L}SS{M(Oxidation (M))|F};[YN]{I|L}{I|L}{[MG]|[TS]}{[ET]|[MV]}SS{M(Oxidation (M))|F};[YN]{I|L}{I|L}Q[YV]DS{M(Oxidation (M))|F};[YN]{I|L}{I|L}[YN]{I|L}DS{M(Oxidation (M))|F};[YN]{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RDS{M(Oxidation (M))|F};[YN]{I|L}DR{M(Oxidation (M))|F}{[WT]|[RM]}{M(Oxidation (M))|F};[YN]{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DRS{M(Oxidation (M))|F};[YN][{M(Oxidation (M))|F}V][VS]V{I|L}SS{M(Oxidation (M))|F} 8.7713;7.477;7.3213;6.2598;6.1827;6.0836;5.8908;5.8519;5.7923;5.6504 +;-;-;-;-;-;-;-;-;- + 9141 + 1 1.242 193038.0 1.0 10274 4905 15173 HBL1_DMSO_200M_050219_2,15181 HBL1_DMSO_200M_050219_2,15181,NYIDRFLSSM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15182 79.89 395.0 319070.0 25 0 26206.0 -1 0 126 785.6787592391347 2354.014448317604 3 786.0148803591728 MULTI CID FTMS 0 0 0 15173 487990.71875 0.1949343736755295 -2 0.1943588256835937 9 4 [{M(Oxidation (M))|F}V]NQPTV 7 -1 31.252 0.0 0.0 1.3276 0.0 0.0 0.0 1565.5718573354354 1565.5718573354354 4.419876431001359 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.7614393726401688 0.5 [{M(Oxidation (M))|F}V]NQPTV 1.3276 - 1786 1 1.242 101510.1 1.0 10275 4905 15173 HBL1_DMSO_200M_050219_2,15182 HBL1_DMSO_200M_050219_2,15182, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15183 79.895 240.0 1335900.0 25 0 104890.0 + 24862 MPMMPGPPM 9 182 494.7091136373756 987.4036743415512 2 494.7110473513603 MULTI CID FTMS 0 0 0 15173 293351.4375 0.508632822998032 5 -0.5831222534179688 10 Unmodified _MPMMPGPPM_ ENSG00000124562|ENST00000244520|SNRPC 28.17323086031832 0.1727213568982648 4 [VP]SGMV{I|L}T 8 8 48.105 0.0 0.0 4.8719 0.0 0.0 0.0 199.9645623632887 199.9645623632887 25.014328706612503 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.7062032535593157 0.0 [VP]SGMV{I|L}T 4.8719 - 5005 1 1.242 240927.7 1.0 10276 4905 15173 HBL1_DMSO_200M_050219_2,15183 HBL1_DMSO_200M_050219_2,15183,MPMMPGPPM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15184 79.904 530.0 344940.0 25 0 32937.0 + 972 AFPKAVSVF 9 154 483.276765013268 964.538977093336 2 483.2770263552666 MULTI CID FTMS 0 0 0 15173 279205.625 0.9530271527906076 -2 0.1943588256835937 11 Unmodified _AFPKAVSVF_ ENSG00000141526|ENST00000582743|SLC16A3;ENST00000579572.1_1_17:80193878-80195110:+|nuORF;ENST00000581642.1_1_17:80193878-80194172:+|nuORF;ENST00000584781.5_1_17:80193878-80195055:+|nuORF 36.12702656103203 0.0967173616627612 4 [KP]AVSV 6 3 33.505 0.0 0.0 3.4737 0.0 0.0 0.0 380.1612725268969 380.1612725268969 5.899921563585913 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.805462187404089 0.0 + [KP]AVSV 3.4737 + + 959 1 1.242 141598.7 1.0 10277 4905 15173 HBL1_DMSO_200M_050219_2,15184 HBL1_DMSO_200M_050219_2,15184,AFPKAVSVF True True AFPKAVSVF 79.903959 483.277026355267 3464134.0 15173.0 ENST00000584781.5_1_17:80193878-80195055:+|nuORF;;ENSG00000141526|ENST00000582743|SLC16A3;;ENST00000579572.1_1_17:80193878-80195110:+|nuORF;;ENST00000581642.1_1_17:80193878-80194172:+|nuORF 2.674818813800812 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15185 79.915 608.0 234660.0 25 0 16199.0 15022 ILSTFLLIGWV 11 152 421.2556697467544 1260.7451798404632 3 421.2555419802666 MULTI CID FTMS 0 0 0 15173 254524.203125 0.1958552491285222 5 -0.5831222534179688 12 Unmodified _ILSTFLLIGWV_ ENSG00000178607|ENST00000433197|ERN1 17.11289562659939 0.6791789249425932 4 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 7 + 106.45 0.0 0.0 8.4431 8.4431 91.94 0.0 0.0 0.0 85.97077769377812 18.279550148593486 18.279550148593486 9.164539485499262 0 0.6307196863200843 2.0 0.0 0.3252574989159953 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR 8.4431;7.7162 -;- 545 + 1 1.242 123138.2 1.0 10278 4905 15173 HBL1_DMSO_200M_050219_2,15185 HBL1_DMSO_200M_050219_2,15185,ILSTFLLIGWV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15186 79.926 654.0 213910.0 25 0 24907.0 19842 LHKKIRDAEIS 11 177 437.2572260113853 1308.749848634356 3 437.2570983767509 MULTI CID FTMS 0 0 0 15173 207492.6875 0.5756072458675968 4 -0.4132919311523437 13 Unmodified _LHKKIRDAEIS_ ENSG00000164440|ENST00000358430|TXLNB 4.897010918128616 0.8520435188433833 4 V 1 11 10.713 0.0 0.0 0.81859 0.0 0.0 1191.6702873324011 0.0 1191.6702873324011 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.81859 - 356 + 1 1.242 127931.6 1.0 10279 4905 15173 HBL1_DMSO_200M_050219_2,15186 HBL1_DMSO_200M_050219_2,15186,LHKKIRDAEIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15187 79.935 513.0 700240.0 25 0 65519.0 + 3386 AYQSIQNYL 9 216 550.2745647623543 1098.5345765915083 2 550.2748290896416 MULTI CID FTMS 0 0 0 15173 197265.875 0.1894777360865586 -2 0.1943588256835937 14 Unmodified _AYQSIQNYL_ ENSG00000134109|ENST00000256497|EDEM1;nc|ENSG00000134109|Q92611-2|EDEM1 49.93300154707207 0.0405168250806675 4 EPPEK{I|L}NC(Carbamidomethyl (C)){I|L} 9 7 + 42.535 0.0 0.0 3.872 3.872 64.731 0.0 0.0 0.0 12.916756407563277 5.217418383426562 5.217418383426562 0.6242413871779462 0 0.1643943297944484 0.6777807052660807 0.0 0.555462187404089 EPPEK{I|L}NC(Carbamidomethyl (C)){I|L};EPPEKRQC{I|L};EPPEKRAC(Carbamidomethyl (C)){I|L};EPPEK{I|L}NGC{I|L};EPPEKRAGC{I|L};EPPEK[HS]Y{I|L};EPPEK{I|L}QC(Carbamidomethyl (C))V;EPRNSGM[VP]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QS{I|L}QNY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QRKEP[HA] 3.872;3.8152;3.8152;3.7583;3.7015;3.4553;3.3721;3.37;3.1756;3.1355 -;-;-;-;-;-;-;-;+;- + 20431 + 1 1.242 265870.2 1.0 10280 4905 15173 HBL1_DMSO_200M_050219_2,15187 HBL1_DMSO_200M_050219_2,15187,AYQSIQNYL True True AYQSIQNYL 79.935006 550.274829089642 7935613.5 15173.0 ENSG00000134109|ENST00000256497|EDEM1;;nc|ENSG00000134109|Q92611-2|EDEM1 4.415855248769124 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15188 79.947 583.0 107150.0 25 0 6605.7 -1 0 109 690.6601210172981 0 690.3535034060478 PEAK CID FTMS 0 0 0 -1 0 15 4 WS 2 -1 10.969 0.0 0.0 0.79526 0.0 0.0 864.0657731851837 239.10457788638908 1103.170351071573 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WS 0.79526 - 89 + 1 1.242 53336.4 1.0 10281 4905 15173 HBL1_DMSO_200M_050219_2,15188 HBL1_DMSO_200M_050219_2,15188, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15189 79.957 561.0 179720.0 25 0 13915.0 + 10962 GALYKQMKLLS 11 115 626.3617325483765 1250.708912163553 2 626.3625366091728 MULTI CID FTMS 0 0 0 15173 142183.46875 0.2980094955722066 -4 0.3924331665039062 16 Unmodified _GALYKQMKLLS_ REV__AluSq2_dup37925|chr11:61391283-61391540:+|1.113432909944505|0.041105984733163|4.76|47.0|7|3|sense 7.608950283845883 0.8392484121837455 4 {I|L} 1 -1 11.259 0.0 0.0 0.90021 0.0 0.0 1119.613771637965 0.0 1119.613771637965 0.0 0.6631278263729534 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.90021 + + 177 + 1 1.242 81898.5 1.0 10282 4905 15173 HBL1_DMSO_200M_050219_2,15189 HBL1_DMSO_200M_050219_2,15189,GALYKQMKLLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15190 79.967 580.0 164760.0 25 0 7071.1 + 7962 ELSWWGDSSI 10 145 590.2674438357353 0 590.2674438357353 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _ELSWWGDSSI_ REV__ENSG00000077063|ENST00000160373|CTTNBP2;REV__ENST00000467088.1_1_7:117400459-117407215:-|nuORF 19.256988751693697 0.3042552096208299 4 Y 1 -1 6.9897 0.0 0.0 0.59309 0.0 0.0 265.1198222425066 747.3007920058025 1012.420614248309 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.59309 - 87 + 1 1.242 78205.5 1.0 10283 4905 15173 HBL1_DMSO_200M_050219_2,15190 HBL1_DMSO_200M_050219_2,15190,ELSWWGDSSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15191 79.979 624.0 347850.0 25 0 28926.0 + -1 NAFQYVNSI 9 121 1055.5150232323715 0 1055.517016589642 PEAK CID FTMS 0 0 0 15173 141792.015625 0.74940840127583 -1 0.0983734130859375 18 ENSG00000104613|ENST00000397977|INTS10 4 NSNVYQGG 8 -1 66.254 0.0 0.0 3.1414 0.0 0.0 1071.5357240434755 215.08294092349848 1286.6186649669742 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5114393726401688 2.353917193908117 NSNVYQGG 3.1414 - 17068 + 1 1.242 140183.3 1.0 10284 4905 15173 HBL1_DMSO_200M_050219_2,15191 HBL1_DMSO_200M_050219_2,15191, False False NAFQYVNSI 79.978798 1055.51701658964 765844.1875 15173.0 ENSG00000104613|ENST00000397977|INTS10 7.400783538818359 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15192 79.989 605.0 156110.0 25 0 11247.0 -1 0 124 647.3762455734617 646.3689691068616 1 648.3749267458916 MULTI CID FTMS 0 0 0 -1 0 19 4 [EP]{I|L} 3 -1 23.301 0.0 0.0 3.6049 0.0 0.0 0.0 304.1661995335158 304.1661995335158 11.222412206649466 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [EP]{I|L} 3.6049 - 115 1 1.242 75596.2 1.0 10285 4905 15173 HBL1_DMSO_200M_050219_2,15192 HBL1_DMSO_200M_050219_2,15192, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15193 80.001 664.0 323640.0 25 0 28306.0 + 34181 SLNEQLNTL 9 233 516.2703552733494 1030.5261576134988 2 516.7733032107353 MULTI CID FTMS 0 0 0 15173 127797.109375 0.5410219428678171 -3 0.3337478637695312 20 Unmodified _SLNEQLNTL_ REV__ENSG00000130779|ENST00000620786|CLIP1;REV__nc|ENSG00000130779|P30622-1|CLIP1;REV__nc|ENSG00000130779|P30622-2|CLIP1 29.081581746732265 0.1611639662936252 4 {NN|[MP]|[D{I|L}]|[EV]}Q{[QS]|[NT]}{I|L}S{M(Oxidation (M))|F} 8 -1 35.046 0.0 0.0 3.4008 0.0 0.0 0.0 109.05195759215556 109.05195759215556 1.9612073220308588 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.0431576817365438 0.0 {NN|[MP]|[D{I|L}]|[EV]}Q{[QS]|[NT]}{I|L}S{M(Oxidation (M))|F} 3.4008 - 11835 1 1.242 161279.3 1.0 10286 4905 15173 HBL1_DMSO_200M_050219_2,15193 HBL1_DMSO_200M_050219_2,15193,SLNEQLNTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15195 80.005 0.51 72973000.0 25 0 7482800.0 + 28702 PVSFRNTWL 9 63 560.3015854213894 1118.5886179095787 2 560.3029052615166 MULTI CID FTMS 0 0 0 15194 90983768.0 0.6717787468343978 2 -0.1819610595703125 1 Unmodified _PVSFRNTWL_ REV__ENSG00000077157|ENST00000608999|PPP1R12B;REV__ENST00000367272.4_1_Y:28425247-28427584:-|nuORF;REV__nc|ENSG00000077157|O60237-6|PPP1R12B 4.75600775471527 0.7486543447549536 4 [VP]S{[MG]|[TS]}VPV 8 -1 18.594 0.0 0.0 1.6622 0.0 0.0 0.0 349.1605532945975 349.1605532945975 5.4947189572098445 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.0 [VP]S{[MG]|[TS]}VPV 1.6622 - 75 1 1.225 36864.0 1.0 10287 4906 15194 HBL1_DMSO_200M_050219_2,15195 HBL1_DMSO_200M_050219_2,15195,PVSFRNTWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15196 80.006 12.0 3516400.0 25 0 279290.0 + 10526 FVDPAQITM 9 69 511.2545127153543 1020.4944724975086 2 511.2550842165947 MULTI CID FTMS 0 0 0 15194 4402680.5 0.923458061306292 1 -0.0803070068359375 2 Unmodified _FVDPAQITM_ ENSG00000167325|ENST00000300738|RRM1 26.88365393820708 0.1891292719743517 4 [{I|L}T]{M(Oxidation (M))|F}[PA]Q{I|L}TM 9 3 [{I|L}T]{M(Oxidation (M))|F}[PA]Q{I|L} + + 23.856 21.514 2.7926 2.3377 2.3377 44.908 0.0 0.0 0.0 0.0 -4.8057019639099465 -4.8057019639099465 0.0 0 0.0 0.0 0.2887254899964357 0.0 [{I|L}T]{M(Oxidation (M))|F}[PA]Q{I|L}TM 2.3377 - 107 + 1 1.225 37808.7 1.0 10288 4906 15194 HBL1_DMSO_200M_050219_2,15196 HBL1_DMSO_200M_050219_2,15196,FVDPAQITM False True FVDPAQITM 80.006276 511.255084216595 149310240.0 15194.0 ENSG00000167325|ENST00000300738|RRM1 7.803901354471843 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15197 80.007 5.4 6046200.0 25 0 547660.0 + 26198 NQFVQPASVGV 11 69 573.3003879927538 1144.5862230523076 2 573.3008911013603 MULTI CID FTMS 0 0 0 15194 7810753.5 0.4412459209874278 -2 0.2404556274414062 3 Unmodified _NQFVQPASVGV_ REV__ENST00000298295.3_1_10:45472209-45472434:-|nuORF 15.248480904072842 0.7179608125786238 4 GGQ{M(Oxidation (M))|F} 4 -1 37.378 0.0 0.0 3.2656 0.0 0.0 0.0 752.3940287986544 752.3940287986544 -0.2906776956850265 0.0 -0.2906776956850265 0.0 0 1.0 1.3979400086720375 0.0 0.7614393726401688 GGQ{M(Oxidation (M))|F} 3.2656 - 180 1 1.225 33245.7 1.0 10289 4906 15194 HBL1_DMSO_200M_050219_2,15197 HBL1_DMSO_200M_050219_2,15197,NQFVQPASVGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15198 80.009 8.5 3969600.0 25 0 408710.0 + 26235 NQITQLESL 9 66 523.2796756405314 1044.5447983478628 2 523.2805053591728 MULTI CID FTMS 0 0 0 15194 5553910.0 1.0 0 0.0 4 Unmodified _NQITQLESL_ ENSG00000138180|ENST00000371485|CEP55;ENST00000496302.1_1_10:95278654-95279576:+|nuORF 58.6788170122104 0.0268135626297836 4 {I|L}QTHS{I|L} 6 5 57.868 0.0 0.0 5.54 0.0 0.0 347.1700293700485 0.0 347.1700293700485 0.0 46.06350227434408 0.0 0.0 0 0.0 0.0 1.274227503252014 0.6989700043360187 {I|L}QTHS{I|L} 5.54 - 340 + 1 1.225 31865.3 1.0 10290 4906 15194 HBL1_DMSO_200M_050219_2,15198 HBL1_DMSO_200M_050219_2,15198,NQITQLESL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15199 80.01 9.9 5172800.0 25 0 1087200.0 + 40697 VLGERIVIV 9 63 499.32399994952107 996.6334469658422 2 499.3241149783134 MULTI CID FTMS 0 0 0 15194 5115900.5 0.3205107233471292 -2 0.2404556274414062 5 Unmodified _VLGERIVIV_ ENSG00000175946|ENST00000684634|KLHL38 43.85829265575387 0.0542763391141878 4 S{I|L}{I|L}V 4 6 45.988 0.0 0.0 4.6143 0.0 0.0 566.3567982404312 0.0 566.3567982404312 0.0 38.99797211252192 0.0 0.0 0 0.8807196863200843 0.0 0.6747425010840047 0.0 S{I|L}{I|L}V 4.6143 - 64 1 1.225 46979.8 1.0 10291 4906 15194 HBL1_DMSO_200M_050219_2,15199 HBL1_DMSO_200M_050219_2,15199,VLGERIVIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15200 80.011 11.0 6426300.0 25 0 1874900.0 + 15725 IREQTVRLL 9 50 564.3475748968642 1126.6805968605283 2 564.3479492068291 MULTI CID FTMS 0 0 0 15194 4342216.5 0.5396826570650533 -1 0.1420822143554687 6 Unmodified _IREQTVRLL_ REV__ENSG00000118246|ENST00000402774|FASTKD2;REV__ENST00000487777.5_1_2:207631381-207653673:+|nuORF;REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2 15.248480904072842 0.4239247793462406 4 {I|L}R 2 -1 22.831 0.0 0.0 2.0264 0.0 0.0 0.0 854.4757784479124 854.4757784479124 10.841218823962109 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}R 2.0264 + + 4 + 1 1.225 64455.7 1.0 10292 4906 15194 HBL1_DMSO_200M_050219_2,15200 HBL1_DMSO_200M_050219_2,15200,IREQTVRLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15201 80.012 15.0 3709200.0 25 0 832230.0 + 12398 GTIGLIHAI 9 85 447.7733812077765 893.532209482353 2 447.7738525271416 MULTI CID FTMS 0 0 0 15194 2189473.0 0.6789395141003011 -1 0.1420822143554687 7 Unmodified _GTIGLIHAI_ ENSG00000118939|ENST00000377595|UCHL3;ENST00000563635.5_1_13:76123956-76287321:+|nuORF 26.34127834903884 0.1960301806784604 4 {I|L}AV[R{M(Oxidation (M))|F}] 5 8 17.703 0.0 0.0 1.9812 0.0 0.0 289.163021105203 0.0 289.163021105203 0.0 0.0784749426325923 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AV[R{M(Oxidation (M))|F}] 1.9812 - 171 + 1 1.225 47122.0 1.0 10293 4906 15194 HBL1_DMSO_200M_050219_2,15201 HBL1_DMSO_200M_050219_2,15201,GTIGLIHAI False True GTIGLIHAI 80.01217 447.773852527142 19059498.0 15194.0 ENSG00000118939|ENST00000377595|UCHL3;;ENST00000563635.5_1_13:76123956-76287321:+|nuORF 1.581085165341695 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15202 80.013 46.0 982060.0 25 0 124500.0 + 24878 MPMQDIKMI 9 77 553.7740716085459 1105.5335902838915 2 553.7748290896416 MULTI CID FTMS 0 0 0 15194 1193719.75 0.2452488067251751 2 -0.1819610595703125 8 Unmodified _MPMQDIKMI_ ENSG00000185686|ENST00000405655|PRAME 61.60191391372663 0.0251951588191061 4 MPMQPMKM 8 3 68.085 0.0 0.0 6.1585 0.0 0.0 0.0 128.07248865299064 128.07248865299064 38.19721602771011 0.0 0.0 0.0 0 2.1237125054200234 2.0 0.0 0.4247425010840047 MPMQPMKM 6.1585 - 539 + 1 1.225 40620.0 1.0 10294 4906 15194 HBL1_DMSO_200M_050219_2,15202 HBL1_DMSO_200M_050219_2,15202,MPMQDIKMI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15203 80.015 60.0 1454700.0 25 0 201300.0 + 31558 RQLESLIRL 9 99 376.5679917616087 1126.682145885026 3 376.5680114626884 MULTI CID FTMS 0 0 0 15194 903324.0 0.445849763159403 -1 0.1420822143554687 9 Unmodified _RQLESLIRL_ ENSG00000104738|ENST00000649973|MCM4;ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 75.76082778847304 0.0188720312721366 4 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}ES{I|L}{I|L}[R{I|L}] 9 0 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L} + + 48.307 17.007 4.2813 4.2876 4.2876 49.744 0.0 0.0 0.0 0.0 24.054556341805764 0.0 0.0 0 1.3494850021680094 0.0 0.805462187404089 0.5866968715561641 + + {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}ES{I|L}{I|L}[R{I|L}] 4.2876 + + 156 + 1 1.225 75928.2 1.0 10295 4906 15194 HBL1_DMSO_200M_050219_2,15203 HBL1_DMSO_200M_050219_2,15203,RQLESLIRL True True RQLESLIRL 80.014927 376.568011462688 13454204.0 15194.0 nc|ENSG00000125885|Q9UJA3-2|MCM8;;ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;ENSG00000104738|ENST00000649973|MCM4 3.0477041403452554 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15204 80.017 105.0 630810.0 25 0 101140.0 + 1626 ALMAAPLSL 9 75 451.75274496202985 901.4909369908596 2 451.7529479861259 MULTI CID FTMS 0 0 0 15194 684307.1875 0.0526899899618269 -9 1.043426513671875 10 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 49.66892048692302 0.0410958345688192 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}[{I|L}A] 9 3 + 60.34 0.0 0.0 6.6933 6.6933 80.277 0.0 0.0 0.0 13.546349804879156 5.642492736872597 5.642492736872597 3.0102999566398125 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}[{I|L}A];[{I|L}A]{M(Oxidation (M))|F}APS{I|L}[{I|L}A];[{I|L}A]WES{I|L}[{I|L}A];{[TV]|[{I|L}S]}MPAS{I|L}[{I|L}A];[{I|L}A]WTD{I|L}[{I|L}A];{[TV]|[{I|L}S]}MAPS{I|L}[{I|L}A];[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}[{I|L}A];[{I|L}A]{[ES]|[DT]|[{I|L}C]}W{I|L}[{I|L}A];[{I|L}A]{M(Oxidation (M))|F}P[KP]{[ET]|[MV]};{[HG]|PP}S{M(Oxidation (M))|F}AS{I|L}[{I|L}A] 6.6933;6.3594;5.6408;5.1907;5.1116;4.8568;4.2227;4.0334;3.7575;3.6282 -;-;-;-;-;-;-;-;-;- 368 1 1.225 57515.3 1.0 10296 4906 15194 HBL1_DMSO_200M_050219_2,15204 HBL1_DMSO_200M_050219_2,15204,ALMAAPLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15205 80.024 352.0 381180.0 25 0 71899.0 + 23189 LSRWLWPPRV 10 136 655.3824352675513 1308.7503176019025 2 655.3819457888603 MULTI CID FTMS 0 0 0 15194 586486.3125 0.3782145358364218 5 -0.491851806640625 11 Unmodified _LSRWLWPPRV_ REV__ENST00000340900.3_1_14:21270181-21270996:-|nuORF;REV__ENST00000397967.4_1_14:21270181-21271013:-|nuORF 9.38312468134398 0.6832340498775793 4 {M(Oxidation (M))|F}GSV 4 -1 25.235 0.0 0.0 1.9282 0.0 0.0 654.40200324819 261.1620272272094 915.5640304753996 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.3252574989159953 0.0 {M(Oxidation (M))|F}GSV 1.9282 - 305 + 1 1.225 119587.8 1.0 10297 4906 15194 HBL1_DMSO_200M_050219_2,15205 HBL1_DMSO_200M_050219_2,15205,LSRWLWPPRV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15206 80.025 56.0 625080.0 25 0 36033.0 -1 PLLDHCHVT 9 83 546.2678061303419 1090.5210593274835 2 546.2695800662041 MULTI CID FTMS 0 0 0 15194 454284.875 0.9420203632111744 -1 0.1420822143554687 12 Carbamidomethyl (C) _PLLDHC(Carbamidomethyl (C))HVT_ ENSG00000159307|ENST00000360835|SCUBE1 13.50788311687929 0.4710407108020397 4 [{I|L}P]M{I|L}V 5 -1 36.466 0.0 0.0 3.3439 0.0 0.0 0.0 534.167301220731 534.167301220731 16.020599913279625 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.0 [{I|L}P]M{I|L}V 3.3439 - 92 1 1.225 34297.6 1.0 10298 4906 15194 HBL1_DMSO_200M_050219_2,15206 HBL1_DMSO_200M_050219_2,15206,PLLDHCHVT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15207 80.028 180.0 433000.0 25 0 32173.0 -1 GAAFLFMTFH 10 87 386.5192895040948 1156.5360391124843 3 386.5193969607353 MULTI CID FTMS 0 0 0 15194 412181.5625 0.1506953703247544 1 -0.0803070068359375 13 Oxidation (M) _GAAFLFM(Oxidation (M))TFH_ ENSG00000112249|ENST00000369162|ASCC3;ENST00000468245.2_1_6:101296020-101315873:-|nuORF;nc|ENSG00000112249|Q8N3C0-4|ASCC3 12.872603262515298 0.6315522313594999 4 V{I|L} 2 -1 20.969 0.0 0.0 1.8131 0.0 0.0 0.0 941.3631450584596 941.3631450584596 0.5237875363565792 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L} 1.8131 - 16 + 1 1.225 70847.2 1.0 10299 4906 15194 HBL1_DMSO_200M_050219_2,15207 HBL1_DMSO_200M_050219_2,15207,GAAFLFMTFH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15208 80.037 480.0 280190.0 25 0 39654.0 -1 0 113 1016.1425510389556 3045.4058237170666 3 1016.47911375761 MULTI CID FTMS 0 0 0 15194 362159.5 0.9366665831495284 -1 0.1420822143554687 14 4 DANCW{[YD]|[{M(Oxidation (M))|F}M]} 7 -1 16.699 0.0 0.0 0.54835 0.0 0.0 2160.049156632326 0.0 2160.049156632326 0.0 4.09929411522249 0.0 0.0 0 0.1989700043360188 0.0 0.0 0.5 DANCW{[YD]|[{M(Oxidation (M))|F}M]} 0.54835 - 1332 1 1.225 95102.8 1.0 10300 4906 15194 HBL1_DMSO_200M_050219_2,15208 HBL1_DMSO_200M_050219_2,15208, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15209 80.042 243.0 677620.0 25 0 82909.0 + 45083 YPYLGPSTL 9 170 505.7634486945394 1009.5123444558787 2 505.7634460330009 MULTI CID FTMS 0 0 0 15194 333622.4375 0.0858550209263972 -4 0.475830078125 15 Unmodified _YPYLGPSTL_ ENSG00000136631|ENST00000644510|VPS45;nc|ENSG00000136631|Q9NRW7-2|VPS45 67.03532852164291 0.0222449892513529 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{I|L}GPST{I|L} 9 0 + 54.699 0.0 0.0 5.4183 5.4183 75.258 0.0 0.0 0.0 15.258786806597634 12.976146931408287 12.976146931408287 3.0102999566398125 0 1.1237125054200234 1.5228787452803376 0.6171302707394362 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{I|L}GPST{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}YGPST{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GYPST{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GPSYT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YVAPST{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GPYST{I|L};[{I|L}P]YYGPST{I|L};[{I|L}P]YGYPST{I|L};[{I|L}P]YGPSYT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{I|L}G[VG]{[QN]|[E{I|L}]|[KN]} 5.4183;5.1201;4.8219;4.6811;4.6475;4.1296;3.9068;3.6086;3.4678;3.2199 +;-;-;-;-;-;-;-;-;- + 3516 1 1.225 122761.3 1.0 10301 4906 15194 HBL1_DMSO_200M_050219_2,15209 HBL1_DMSO_200M_050219_2,15209,YPYLGPSTL True True YPYLGPSTL 80.041528 505.763446033001 44912636.0 15194.0 ENSG00000136631|ENST00000644510|VPS45;;nc|ENSG00000136631|Q9NRW7-2|VPS45 4.307980696360271 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15210 80.05 482.0 388000.0 25 0 30635.0 + 5575 DMYEQFQNI 9 170 594.255079565318 1186.495606197436 2 594.2560302615166 MULTI CID FTMS 0 0 0 15194 300750.8125 0.1205862833122466 -3 0.3364410400390625 16 Unmodified _DMYEQFQNI_ ENSG00000100883|ENST00000216774|SRP54;ENST00000553923.1_1_14:35483969-35488318:+|nuORF;ENST00000556445.1_1_14:35487839-35488318:+|nuORF;nc|ENSG00000100883|P61011-2|SRP54 43.85829265575387 0.0542763391141878 4 [MD]YEQ{M(Oxidation (M))|F} 6 3 50.512 0.0 0.0 4.2572 0.0 0.0 0.0 370.1692760053326 370.1692760053326 24.84997978389101 0.0 0.0 0.0 0 0.0 2.0 0.4308845489566889 0.3807196863200844 + [MD]YEQ{M(Oxidation (M))|F} 4.2572 + + 1092 1 1.225 138765.2 1.0 10302 4906 15194 HBL1_DMSO_200M_050219_2,15210 HBL1_DMSO_200M_050219_2,15210,DMYEQFQNI True True DMYEQFQNI 80.050056 594.256030261517 40441296.0 15194.0 ENST00000553923.1_1_14:35483969-35488318:+|nuORF;;nc|ENSG00000100883|P61011-2|SRP54;;ENST00000556445.1_1_14:35487839-35488318:+|nuORF;;ENSG00000100883|ENST00000216774|SRP54 7.321755409240723 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15211 80.06 545.0 385380.0 25 0 28106.0 + -1 SAYGPGLVSI 10 171 482.26121254258777 0 482.2613708376884 PEAK CID FTMS 0 0 0 15194 307122.6875 0.8264342901167788 -1 0.1420822143554687 17 Carbamidomethyl (C) _TGLTC(Carbamidomethyl (C))IVSL_ nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2 42.09456458481378 0.053291022336892 4 VSVA 4 -1 23.716 0.0 0.0 2.464 0.0 0.0 381.1520504740443 222.1253603570922 603.2774108311365 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.0 VSVA 2.464 - 768 + 1 1.225 159872.9 1.0 10303 4906 15194 HBL1_DMSO_200M_050219_2,15211 HBL1_DMSO_200M_050219_2,15211,TGLTCIVSL False False SAYGPGLVSI 80.059618 482.261370837688 3078888.25 15194.0 nc|ENSG00000079819|O43491-3|EPB41L2;;nc|ENSG00000079819|O43491-2|EPB41L2;;nc|ENSG00000079819|O43491-4|EPB41L2;;ENSG00000079819|ENST00000337057|EPB41L2 1.9730407893657684 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15212 80.068 483.0 167200.0 25 0 29229.0 -1 SVFRCLPKSI 10 105 603.8364674078923 1205.6583818825843 2 603.8370849490166 MULTI CID FTMS 0 0 0 15194 315268.84375 0.770455779680535 2 -0.1819610595703125 18 Carbamidomethyl (C) _SVFRC(Carbamidomethyl (C))LPKSI_ ENSG00000174123|ENST00000308973|TLR10 6.723162845929126 0.6955379296933136 4 [VS]P{[MG]|[TS]}V{I|L}T 8 -1 35.355 0.0 0.0 2.9324 0.0 0.0 0.0 418.22036853713456 418.22036853713456 23.477852172901144 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 [VS]P{[MG]|[TS]}V{I|L}T 2.9324 - 518 1 1.225 63022.0 1.0 10304 4906 15194 HBL1_DMSO_200M_050219_2,15212 HBL1_DMSO_200M_050219_2,15212,SVFRCLPKSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15213 80.078 491.0 218310.0 25 0 18261.0 -1 SLLCSCRCPL 10 170 576.2738869603731 1150.5332209875462 2 576.2739135622978 MULTI CID FTMS 0 0 0 15194 289562.96875 1.0 0 0.0 19 Carbamidomethyl (C) _SLLCSCRC(Carbamidomethyl (C))PL_ ENST00000485539.5_1_1:6269452-6270654:+|nuORF 13.042465956692816 0.6287021003332052 4 {[TV]|[{I|L}S]}{I|L} 3 -1 30.731 0.0 0.0 2.671 0.0 0.0 0.0 834.3090748295962 834.3090748295962 9.840059088363232 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.1861818737241735 0.0 {[TV]|[{I|L}S]}{I|L} 2.671 + + 371 1 1.225 87772.4 1.0 10305 4906 15194 HBL1_DMSO_200M_050219_2,15213 HBL1_DMSO_200M_050219_2,15213,SLLCSCRCPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15214 80.081 164.0 309460.0 25 0 31423.0 + 35317 SSSSHPLRCAV 11 87 381.85640053382417 1142.5473722016725 3 381.8557006716728 MULTI CID FTMS 0 0 0 15194 299208.375 0.6476511499402618 1 -0.0803070068359375 20 Unmodified _SSSSHPLRCAV_ REV__ENSG00000141298|ENST00000540801|SSH2;REV__nc|ENSG00000141298|Q76I76|SSH2 3.2813086475875832 0.8596665074481906 4 [VP]Q{M(Oxidation (M))|F}E 5 -1 11.826 0.0 0.0 1.0351 0.0 0.0 0.0 539.2725058288787 539.2725058288787 0.9890400188812568 0.0 0.0 0.0 0 0.0 0.958607314841775 0.4247425010840047 0.0 [VP]Q{M(Oxidation (M))|F}E 1.0351 - 73 1 1.225 51239.5 1.0 10306 4906 15194 HBL1_DMSO_200M_050219_2,15214 HBL1_DMSO_200M_050219_2,15214,SSSSHPLRCAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15216 80.085 5.6 9745600.0 25 0 1480500.0 + 37308 TIRYPDPLI 9 62 544.3110889334554 1086.607624933711 2 544.3112670779228 MULTI CID FTMS 0 0 0 15215 10908354.0 0.7032100548812237 -2 0.2223892211914062 1 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 47.594388314883695 0.0456443387682827 4 {I|L}TP{I|L}{I|L} 5 5 59.949 0.0 0.0 5.517 0.0 0.0 531.24418837715 0.0 531.24418837715 0.0 43.57840941039747 0.0 0.0 0 1.3494850021680094 0.0 0.8494850021680094 0.0 {I|L}TP{I|L}{I|L} 5.517 - 65 1 1.225 52362.8 1.0 10307 4907 15215 HBL1_DMSO_200M_050219_2,15216 HBL1_DMSO_200M_050219_2,15216,TIRYPDPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15217 80.087 13.0 2545400.0 25 0 218340.0 3533 CVLFVFWNL 9 66 570.7981881959714 0 570.7981445193291 PEAK CID FTMS 0 0 0 15215 1653006.0 0.5658370691252363 2 -0.1909027099609375 2 Unmodified _CVLFVFWNL_ ENSG00000188921|ENST00000495827|HACD4;ENST00000488436.1_1_9:21015895-21017846:-|nuORF 7.289230182591677 0.3433663536648894 4 AAY 3 9 16.198 0.0 0.0 1.4214 0.0 0.0 415.2413826401865 416.19013391666255 831.431516556849 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AAY 1.4214 - 84 + 1 1.225 31996.6 1.0 10308 4907 15215 HBL1_DMSO_200M_050219_2,15217 HBL1_DMSO_200M_050219_2,15217,CVLFVFWNL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15218 80.088 22.0 1801500.0 25 0 249040.0 + 13556 HPFPGPGLAI 10 72 503.2793035367612 1004.5440541403224 2 503.2802001833916 MULTI CID FTMS 0 0 0 15215 1888609.25 0.8474363001236194 1 -0.101654052734375 3 Unmodified _HPFPGPGLAI_ ENSG00000163655|ENST00000496455|GMPS;nc|ENSG00000163655|P49915-2|GMPS 32.116972079565 0.2470863257317063 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{I|L}TT{I|L}A{I|L} 9 6 + 59.899 0.0 0.0 5.9628 5.9628 85.558 0.0 0.0 0.0 15.20181229336984 44.414631983114816 15.20181229336984 9.208187539523747 0 1.3935078169319297 1.154901959985743 0.7302046884880937 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{I|L}TT{I|L}A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GG{I|L}TT{I|L}A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PG]{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[PG][PG]{I|L}A{I|L};[NP]Y{I|L}V{[WT]|[RM]}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H[PG][PG]{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YQ][PG]{I|L}A{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{I|L}T{[RE]|[WV]}{I|L};{[ET]|[MV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{[WT]|[RM]}{I|L} 5.9628;5.0462;3.9814;3.5048;3.2027;3.0807;2.6285;2.5264;1.0815 -;-;-;+;-;-;-;-;- + 140 1 1.225 37710.8 1.0 10309 4907 15215 HBL1_DMSO_200M_050219_2,15218 HBL1_DMSO_200M_050219_2,15218,HPFPGPGLAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15219 80.089 25.0 1945300.0 25 0 156530.0 + 44937 YPPWPGKIV 9 71 528.7980860103809 1055.5816190875616 2 528.7979003787041 MULTI CID FTMS 0 0 0 15215 1675640.375 0.1469622002437149 -13 1.38092041015625 4 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 30.22481116460888 0.1466181017706357 4 YP 2 7 44.776 0.0 0.0 4.2419 0.0 0.0 0.0 792.4439598153306 792.4439598153306 28.22453456369417 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + YP 4.2419 + + 144 + 1 1.225 46209.6 1.0 10310 4907 15215 HBL1_DMSO_200M_050219_2,15219 HBL1_DMSO_200M_050219_2,15219,YPPWPGKIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15220 80.09 62.0 1076100.0 25 0 53601.0 -1 0 87 881.9053212946873 1761.7960896561744 2 881.9058715701103 MULTI CID FTMS 0 0 0 15215 1256517.75 0.2303114659672188 -2 0.2223892211914062 5 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 105.52 0.0 0.0 5.9892 5.9892 80.457 0.0 0.0 0.0 9.390783244394328 85.05932705901364 9.390783244394328 4.771212547196626 0 1.4876954943324543 1.3010299956639813 0.4247425010840047 1.6549471895720984 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQDQA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]DA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ]V[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};[YQ][KC]EQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQW{M(Oxidation (M))|F}YQV{I|L};[QA]HDAEQQDA{M(Oxidation (M))|F}YQV{I|L};[QA]HDEAQQDA{M(Oxidation (M))|F}YQV{I|L} 5.9892;5.7184;5.4766;5.4766;5.4766;5.4216;5.3836;5.3684;5.2507;5.2507 -;-;-;-;-;-;-;-;-;- 5157 1 1.225 50514.7 1.0 10311 4907 15215 HBL1_DMSO_200M_050219_2,15220 HBL1_DMSO_200M_050219_2,15220, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15221 80.095 267.0 1092000.0 25 0 249550.0 -1 0 82 1142.4825278135954 3424.4257540409862 3 1142.818041980267 MULTI CID FTMS 0 0 0 15215 1212846.75 0.7106230030427941 -2 0.2223892211914062 6 4 {[QN]|[E{I|L}]|[KN]}[KQ]TT{I|L}E 8 -1 25.555 0.0 0.0 0.74626 0.0 0.0 0.0 2478.9029430393243 2478.9029430393243 1.6232778524297409 0.0 0.0 0.0 0 0.0 0.0 0.8945990182825422 1.7302046884880935 {[QN]|[E{I|L}]|[KN]}[KQ]TT{I|L}E 0.74626 - 935 1 1.225 212325.6 1.0 10312 4907 15215 HBL1_DMSO_200M_050219_2,15221 HBL1_DMSO_200M_050219_2,15221, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15222 80.097 45.0 1216200.0 25 0 155240.0 + 44887 YPPNPWREI 9 81 586.2980459371845 1170.581538941169 2 586.2982055544853 MULTI CID FTMS 0 0 0 15215 845321.1875 1.0 0 0.0 7 Unmodified _YPPNPWREI_ ENSG00000115825|ENST00000234179|PRKD3 20.41453444215458 0.284085796332423 4 YPPN{I|L}M 6 5 64.245 0.0 0.0 5.4883 0.0 0.0 0.0 452.2120455377563 452.2120455377563 49.55259398656281 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 YPPN{I|L}M 5.4883 - 262 + 1 1.225 49057.2 1.0 10313 4907 15215 HBL1_DMSO_200M_050219_2,15222 HBL1_DMSO_200M_050219_2,15222,YPPNPWREI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15223 80.099 81.0 780660.0 25 0 82536.0 15847 ISMGSAVFAGV 11 103 519.7667058326615 1037.518858732123 2 519.7672607302666 MULTI CID FTMS 0 0 0 15215 558756.5625 0.4837936444115185 2 -0.1909027099609375 8 Unmodified _ISMGSAVFAGV_ ENSG00000015520|ENST00000381160|NPC1L1;nc|ENSG00000015520|Q9UHC9-2|NPC1L1;nc|ENSG00000015520|Q9UHC9-4|NPC1L1;nc|ENSG00000015520|Q9UHC9|NPC1L1 29.081581746732265 0.4093582134107448 4 {NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}SK{M(Oxidation (M))|F}QV 9 6 + 51.466 0.0 0.0 4.9605 4.9605 68.295 0.0 0.0 0.0 4.162088949831251 16.478174818886366 4.162088949831251 0.4575749056067479 0 0.2302046884880938 1.0457574905606752 0.7614393726401688 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}SK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[RN]{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}QAAQV;{NN|[MP]|[D{I|L}]|[EV]}[RN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QV;{[DA]|[EG]}P{M(Oxidation (M))|F}SK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[RN]QV;{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}SK{M(Oxidation (M))|F}[AG]V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[RN]{M(Oxidation (M))|F}[AG]V;[EP]G{M(Oxidation (M))|F}SK{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG]AAQV 4.9605;4.9164;4.8837;4.6263;4.5594;4.5495;4.073;4.0237;4.019;3.9962 -;-;-;-;-;-;-;-;-;- 414 1 1.225 52186.2 1.0 10314 4907 15215 HBL1_DMSO_200M_050219_2,15223 HBL1_DMSO_200M_050219_2,15223,ISMGSAVFAGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15224 80.1 76.0 1076900.0 25 0 87160.0 -1 LCPHCVSLQT 10 105 579.2750681744855 1156.5355834157708 2 579.2743408083916 MULTI CID FTMS 0 0 0 15215 524256.875 0.1586044309125285 2 -0.1909027099609375 9 Carbamidomethyl (C) _LC(Carbamidomethyl (C))PHCVSLQT_ ENSG00000166090|ENST00000329715|IL25;nc|ENSG00000166090|Q9H293-2|IL25 9.38312468134398 0.6832340498775793 4 {I|L}{M(Oxidation (M))|F}{I|L} 3 -1 17.703 0.0 0.0 1.5307 0.0 0.0 0.0 780.291294313892 780.291294313892 2.9980376447570496 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}{I|L} 1.5307 - 102 + 1 1.225 65902.1 1.0 10315 4907 15215 HBL1_DMSO_200M_050219_2,15224 HBL1_DMSO_200M_050219_2,15224,LCPHCVSLQT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15225 80.104 198.0 689190.0 25 0 130050.0 9071 FFCRGDLS 8 101 472.7172508482757 943.4199487633514 2 472.7180053591728 MULTI CID FTMS 0 0 0 15215 493884.78125 0.6924231983640139 2 -0.1909027099609375 10 Unmodified _FFCRGDLS_ L1MC3_dup7320|chrX:70161794-70162664:+|1.112392509996284|0.2551508396873335|2.12|48.0|62|3|anti-sense 14.581692164780916 0.6954967302934248 4 VS{I|L} 3 7 13.275 0.0 0.0 1.4071 0.0 0.0 626.2215977885452 0.0 626.2215977885452 0.0 1.855326119201916 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 VS{I|L} 1.4071 - 92 + 1 1.225 108432.5 1.0 10316 4907 15215 HBL1_DMSO_200M_050219_2,15225 HBL1_DMSO_200M_050219_2,15225,FFCRGDLS False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 15226 80.107 115.0 555380.0 25 0 52703.0 + 23238 LSTLFQTRRP 10 82 609.8528450257742 1217.6911371183485 2 610.3525268435478 MULTI CID FTMS 0 0 0 15215 490446.03125 0.647347057534186 3 -0.3607330322265625 11 Unmodified _LSTLFQTRRP_ REV__ENST00000484256.1_1_22:29191541-29191667:-|nuORF 4.897010918128616 0.7039849508293987 4 {M(Oxidation (M))|F} 1 -1 11.259 0.0 0.0 0.92462 0.0 0.0 1052.612216685534 0.0 1052.612216685534 0.0 7.958303780157184 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.92462 + + 61 + 1 1.225 50341.0 1.0 10317 4907 15215 HBL1_DMSO_200M_050219_2,15226 HBL1_DMSO_200M_050219_2,15226,LSTLFQTRRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15227 80.115 491.0 194650.0 25 0 41574.0 + -1 PSLCLKWRPLK 11 114 699.4081494644868 1396.8017459957734 2 699.4094726443291 MULTI CID FTMS 0 0 0 15215 334988.09375 1.0 0 0.0 12 Carbamidomethyl (C) _PSLC(Carbamidomethyl (C))LKWRPLK_ REV__ENST00000450453.6_2_1:163292807-163295872:+|nuORF;REV__ENST00000524800.5_1_1:163291810-163295872:+|nuORF 2.9952420565917617 0.861016188266951 4 Y 1 -1 10.713 0.0 0.0 0.76699 0.0 0.0 1215.7272506117874 0.0 1215.7272506117874 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.76699 - 76 + 1 1.225 83097.6 1.0 10318 4907 15215 HBL1_DMSO_200M_050219_2,15227 HBL1_DMSO_200M_050219_2,15227,PSLCLKWRPLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15228 80.126 604.0 525320.0 25 0 131420.0 23699 LTTHEQTD 8 165 315.48099590441234 943.421158313437 3 315.4805175662041 MULTI CID FTMS 0 0 0 15215 331071.1875 0.4923386513249157 1 -0.101654052734375 13 Unmodified _LTTHEQTD_ ENSG00000020256|ENST00000216923|ZFP64;nc|ENSG00000020256|Q9NTW7-4|ZFP64;nc|ENSG00000020256|Q9NTW7-6|ZFP64 4.3292370932331545 0.7980541185046766 4 {I|L}S 2 7 16.114 0.0 0.0 1.7081 0.0 0.0 0.0 740.2595189799675 740.2595189799675 9.392653074926049 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}S 1.7081 - 53 + 1 1.225 252859.6 1.0 10319 4907 15215 HBL1_DMSO_200M_050219_2,15228 HBL1_DMSO_200M_050219_2,15228,LTTHEQTD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15229 80.136 582.0 372000.0 25 0 33411.0 + 4234 DAPLDLKI 8 157 442.7574168369762 883.5002807407524 2 442.7582580447197 MULTI CID FTMS 0 0 0 15215 315375.46875 1.0 0 0.0 14 Unmodified _DAPLDLKI_ ENSG00000119685|ENST00000298832|TTLL5;ENST00000555422.5_1_14:76198560-76243086:+|nuORF 36.12702656103203 0.299085846329477 4 {[DA]|[EG]}{I|L}PD{I|L}K{I|L} 8 2 + 69.889 0.0 0.0 7.9104 7.9104 79.182 0.0 0.0 0.0 26.989700043360187 10.791812460476253 10.791812460476253 0.6246936830414995 0 0.3807196863200844 2.0 0.5 0.6747425010840047 {[DA]|[EG]}{I|L}PD{I|L}K{I|L};{[DA]|[EG]}P{I|L}D{I|L}K{I|L};{[DA]|[EG]}{I|L}PD{I|L}{I|L}K;{[DA]|[EG]}P{I|L}D{I|L}{I|L}K;{[DA]|[EG]}{I|L}P[R{I|L}]S{I|L};{[DA]|[EG]}P{I|L}[R{I|L}]S{I|L};{[DA]|[EG]}{I|L}P[R{I|L}]TV;{[DA]|[EG]}P{I|L}[R{I|L}]TV;{[DA]|[EG]}{I|L}R[KP]{[QG]|[NA]};[{I|L}P]Q{I|L}[KT]{[QG]|[NA]} 7.9104;7.8397;6.6889;6.6182;4.8445;4.7738;4.5038;4.4331;1.5858;1.379 -;+;-;-;-;-;-;-;-;- + 613 + 1 1.225 169255.1 1.0 10320 4907 15215 HBL1_DMSO_200M_050219_2,15229 HBL1_DMSO_200M_050219_2,15229,DAPLDLKI False True DAPLDLKI 80.135936 442.75825804472 2744365.0 15215.0 ENST00000555422.5_1_14:76198560-76243086:+|nuORF;;ENSG00000119685|ENST00000298832|TTLL5 3.559117078781128 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15230 80.138 82.0 1013000.0 25 0 68029.0 + 16907 KIIGIMEEV 9 125 516.2934236755412 1030.5722944178824 2 516.2944824099541 MULTI CID FTMS 0 0 0 15215 255793.09375 0.1147678378678808 -2 0.2223892211914062 15 Unmodified _KIIGIMEEV_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 32.78568957990786 0.1150597335874693 4 [K{I|L}]{I|L}G{I|L}MEEV 9 0 + 39.489 0.0 0.0 3.8318 3.8318 79.276 0.0 0.0 0.0 5.639598112107244 2.922271505643927 2.922271505643927 12.553480571382083 0 0.0 0.619788758288394 0.0 0.2742275032520141 + + [K{I|L}]{I|L}G{I|L}MEEV;{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}E{I|L}VK{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{[DS]|[MA]|[CV]|TT}{I|L}VK{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}E{I|L}[K{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}E{[DS]|[MA]|[CV]|TT}{I|L}[K{I|L}]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{[VA]|[{I|L}G]}{I|L}VK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{[VA]|[{I|L}G]}{I|L}[K{I|L}]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[VA]|[{I|L}G]}E{I|L}VK{I|L};EEM{[VA]|[{I|L}G]}{I|L}VK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[VA]|[{I|L}G]}E{I|L}[K{I|L}]V 3.8318;2.6136;2.6017;2.3227;2.3108;2.0899;1.799;1.7978;1.5602;1.5069 +;-;-;-;-;-;-;-;-;- + 411 1 1.225 70334.8 1.0 10321 4907 15215 HBL1_DMSO_200M_050219_2,15230 HBL1_DMSO_200M_050219_2,15230,KIIGIMEEV True True KIIGIMEEV 80.137797 516.294482409954 41385832.0 15215.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-2|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 4.784870942433675 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15231 80.147 513.0 175990.0 25 0 12129.0 26256 NQLESLNMHL 10 141 599.7955342368542 1197.5765155405084 2 599.7962524294853 MULTI CID FTMS 0 0 0 15215 266694.84375 1.0 0 0.0 16 Unmodified _NQLESLNMHL_ ENSG00000197841|ENST00000492450|ZNF181;nc|ENSG00000197841|Q2M3W8-2|ZNF181;nc|ENSG00000197841|Q2M3W8-3|ZNF181 29.84058131909904 0.2982332456971691 4 {[QN]|[E{I|L}]|[KN]}{I|L}E[HK]{M(Oxidation (M))|F}A{M(Oxidation (M))|F} 9 5 35.076 0.0 0.0 2.929 0.0 0.0 0.0 80.05147730045155 80.05147730045155 11.09198518495426 0.0 0.0 0.0 0 1.6237125054200234 0.9208187539523752 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}E[HK]{M(Oxidation (M))|F}A{M(Oxidation (M))|F} 2.929 - 1588 + 1 1.225 67171.1 1.0 10322 4907 15215 HBL1_DMSO_200M_050219_2,15231 HBL1_DMSO_200M_050219_2,15231,NQLESLNMHL False True MVAPDKDYFL 80.146849 599.796252429485 2245245.75 15215.0 ENSG00000125971|ENST00000357156|DYNLRB1;;ENST00000480759.1_1_20:33117938-33128425:+|nuORF 4.795744260152181 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15232 80.159 606.0 452380.0 25 0 57723.0 1903 ALYSDRSI 8 190 462.7437540417929 923.4729551503858 2 462.7450134158134 MULTI CID FTMS 0 0 0 15215 276291.625 0.1047421721523709 -7 0.7423324584960938 17 Unmodified _ALYSDRSI_ ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5 23.1484247019978 0.5573009939494978 4 [{I|L}A]S[W{M(Oxidation (M))|F}]ST{I|L} 8 4 + 33.064 0.0 0.0 3.5804 3.5804 74.061 0.0 0.0 0.0 13.460023133072 2.7736607746618738 2.7736607746618738 7.516930427174039 0 0.7614393726401688 2.0 0.0 0.0 [{I|L}A]S[W{M(Oxidation (M))|F}]ST{I|L};[{I|L}A]S[W{M(Oxidation (M))|F}]{I|L}{[MG]|[TS]};{[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]ST{I|L};[WP][C(Carbamidomethyl (C))H]{I|L}V{I|L};{[VA]|[{I|L}G]}T[W{M(Oxidation (M))|F}]ST{I|L};[VP][HK]DDT{I|L};{[TV]|[{I|L}S]}A[W{M(Oxidation (M))|F}]{I|L}{[MG]|[TS]};[{I|L}T]G[W{M(Oxidation (M))|F}]ST{I|L};[KP][HV]DDT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KC]V{I|L} 3.5804;2.7664;0.96272;0.93799;0.6522;0.39555;0.14874;0.12631;0.086722;0.065 -;-;-;-;-;-;-;-;-;- 651 1 1.225 208508.0 1.0 10323 4907 15215 HBL1_DMSO_200M_050219_2,15232 HBL1_DMSO_200M_050219_2,15232,ALYSDRSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15233 80.17 626.0 222420.0 25 0 30213.0 + 17082 KLEFLYRTKTV 11 162 466.6085347042706 1396.8037747130118 3 466.6081420779228 MULTI CID FTMS 0 0 0 15215 253067.15625 1.0 0 0.0 18 Unmodified _KLEFLYRTKTV_ REV__ENSG00000166321|ENST00000357321|NUDT13;REV__nc|ENSG00000166321|Q86X67-2|NUDT13;REV__nc|ENSG00000166321|Q86X67-4|NUDT13 4.5288652416199255 0.8537804541365391 4 S{I|L} 2 -1 14.949 0.0 0.0 1.0702 0.0 0.0 1178.676346589768 0.0 1178.676346589768 0.0 1.4536501951208436 0.0 0.0 0 0.0 0.0 0.1505149978319906 0.0 S{I|L} 1.0702 - 807 + 1 1.225 116426.5 1.0 10324 4907 15215 HBL1_DMSO_200M_050219_2,15233 HBL1_DMSO_200M_050219_2,15233,KLEFLYRTKTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15234 80.172 137.0 677790.0 25 0 103120.0 + 12685 GVLPNIQAV 9 103 455.771210605697 909.527868278194 2 455.7718994021416 MULTI CID FTMS 0 0 0 15215 234719.125 0.0074247241134693 -6 0.6148223876953125 19 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 44.40701690623563 0.0526327925666318 4 [NP]{I|L}QA 5 4 37.619 0.0 0.0 4.1361 0.0 0.0 0.0 383.2269175878477 383.2269175878477 11.192350840935603 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.6861818737241735 + [NP]{I|L}QA 4.1361 + + 829 1 1.225 74785.2 1.0 10325 4907 15215 HBL1_DMSO_200M_050219_2,15234 HBL1_DMSO_200M_050219_2,15234,GVLPNIQAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15235 80.183 605.0 209220.0 25 0 43627.0 14407 IFIFRHALHLS 11 131 677.3946198570956 1352.774686780991 2 677.3889037966728 MULTI CID FTMS 0 0 0 15215 246261.359375 0.2140123005771656 -7 0.7423324584960938 20 Unmodified _IFIFRHALHLS_ ENST00000544944.6_1_19:45542792-45543053:+|nuORF 9.38312468134398 0.8308777417566128 4 [PS]{I|L}T{M(Oxidation (M))|F}{I|L}Q 7 9 41.031 0.0 0.0 3.0331 0.0 0.0 0.0 563.328860935541 563.328860935541 21.02549117389647 0.0 0.0 0.0 0 0.0 0.6575773191777937 0.75 0.0 [PS]{I|L}T{M(Oxidation (M))|F}{I|L}Q 3.0331 - 547 1 1.225 101487.7 1.0 10326 4907 15215 HBL1_DMSO_200M_050219_2,15235 HBL1_DMSO_200M_050219_2,15235,IFIFRHALHLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15237 80.187 3.1 17620000.0 25 0 2647300.0 + 4638 DAYVLPKL 8 68 459.7682070317223 917.5218611302446 2 459.7685424685478 MULTI CID FTMS 0 0 0 15236 17700658.0 0.6686117635184684 1 -0.0892486572265625 1 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 28.486842064014134 0.4448922141344407 4 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 {[DA]|[EG]}Y + + 29.023 22.676 6.4951 3.1632 3.1632 46.287 0.0 0.0 0.0 0.0 6.346720542744073 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.2614393726401688 + + {[DA]|[EG]}YV{I|L}PK{I|L} 3.1632 + + 40 + 1 1.216 49198.4 1.0 10327 4908 15236 HBL1_DMSO_200M_050219_2,15237 HBL1_DMSO_200M_050219_2,15237,DAYVLPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15238 80.188 13.0 5378700.0 25 0 680460.0 -1 0 69 336.1044863105572 670.1944196879144 2 336.1047851443291 MULTI CID FTMS 0 0 0 15236 4299858.0 0.657707376630671 1 -0.0892486572265625 2 4 {[CP]|[EA]}S 3 -1 10.942 0.0 0.0 1.6327 0.0 0.0 0.0 380.0738366730174 380.0738366730174 6.962724883926656 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[CP]|[EA]}S 1.6327 - 6 + 1 1.216 61624.9 1.0 10328 4908 15236 HBL1_DMSO_200M_050219_2,15238 HBL1_DMSO_200M_050219_2,15238, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15239 80.189 3.3 16030000.0 25 0 4190900.0 + 16887 KIFSGVFVKV 10 63 562.3470163080498 1122.6794796828997 2 562.3473388552666 MULTI CID FTMS 0 0 0 15236 16222850.0 1.0 0 0.0 3 Unmodified _KIFSGVFVKV_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 40.72490554402381 0.149912226101682 4 K{I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}VVK 9 4 + 70.575 0.0 0.0 6.2863 6.2863 92.321 0.0 0.0 0.0 56.13753237018933 15.457574905606748 15.457574905606748 70.57450736251646 0 2.25 1.154901959985743 0.0 0.3494850021680094 K{I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}VVK 6.2863 - 258 + 1 1.216 45249.2 1.0 10329 4908 15236 HBL1_DMSO_200M_050219_2,15239 HBL1_DMSO_200M_050219_2,15239,KIFSGVFVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15240 80.191 19.0 4133500.0 25 0 558600.0 + 14628 IIIPEIQKV 9 70 526.8390743453494 1051.6635957574988 2 526.8395873904228 MULTI CID FTMS 0 0 0 15236 3219222.5 0.4709913727045055 -2 0.1819610595703125 4 Unmodified _IIIPEIQKV_ ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;nc|ENSG00000124207|P55060-3|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L 34.40172386719151 0.1061884637610825 4 {I|L}{I|L}{I|L}PE{I|L}QKV 9 0 + 52.361 0.0 0.0 4.9789 4.9789 81.347 0.0 0.0 0.0 13.702298165592133 8.58327228896922 8.58327228896922 9.208187539523747 0 0.8494850021680094 1.6989700043360187 0.0 0.0 + + {I|L}{I|L}{I|L}PE{I|L}QKV;{I|L}{I|L}{I|L}PE{I|L}[AG]KV 4.9789;4.1033 +;- + 266 + 1 1.216 67939.4 1.0 10330 4908 15236 HBL1_DMSO_200M_050219_2,15240 HBL1_DMSO_200M_050219_2,15240,IIIPEIQKV True True IIIPEIQKV 80.190594 526.839587390423 176388992.0 15236.0 ENSG00000124207|ENST00000262982|CSE1L;;nc|ENSG00000124207|P55060-4|CSE1L;;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;;nc|ENSG00000124207|P55060-3|CSE1L 5.312033891677856 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15241 80.192 79.0 1517400.0 25 0 249330.0 -1 LALETCFS 8 101 470.7263908802107 939.4382288272216 2 470.7264282107353 MULTI CID FTMS 0 0 0 15236 2134929.5 0.6710948865989006 -33 3.412513732910156 5 Carbamidomethyl (C) _LALETC(Carbamidomethyl (C))FS_ ENST00000528706.5_1_11:117279912-117282881:+|nuORF 19.438996006549623 0.6237395211498085 4 {I|L}A{I|L} 3 -1 45.802 0.0 0.0 4.8755 0.0 0.0 0.0 639.2114550086652 639.2114550086652 26.86181873724173 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.0 {I|L}A{I|L} 4.8755 + + 133 + 1 1.216 104591.6 1.0 10331 4908 15236 HBL1_DMSO_200M_050219_2,15241 HBL1_DMSO_200M_050219_2,15241,LALETCFS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15242 80.195 154.0 811760.0 25 0 145100.0 -1 ALLETYCA 8 96 314.15345579277783 939.4385379785336 3 314.1531249880791 MULTI CID FTMS 0 0 0 15236 1972276.0 1.0 0 0.0 6 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 26.88365393820708 0.4786498634179528 4 A{I|L}S 3 -1 50.247 0.0 0.0 5.3487 0.0 0.0 0.0 665.2626766955747 665.2626766955747 40.19311686567606 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.3807196863200844 0.0 A{I|L}S 5.3487 - 32 + 1 1.216 102951.9 1.0 10332 4908 15236 HBL1_DMSO_200M_050219_2,15242 HBL1_DMSO_200M_050219_2,15242,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15243 80.197 24.0 2082500.0 25 0 259030.0 + 22337 LPSLTMLASL 10 80 523.3030805482477 1044.5916081632954 2 523.3060790896416 MULTI CID FTMS 0 0 0 15236 1494842.25 0.7520360884613542 -2 0.1819610595703125 7 Unmodified _LPSLTMLASL_ REV__ENST00000464150.2_1_15:51669612-51676112:+|nuORF 20.453626601364224 0.5043500229302764 4 {I|L}{M(Oxidation (M))|F}{I|L}{I|L}P{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L} 9 -1 + 56.648 0.0 0.0 5.423 5.423 73.921 0.0 0.0 0.0 21.249387366083 12.759621790487683 12.759621790487683 2.302046884880937 0 0.2742275032520141 0.0 0.2302046884880938 0.0 {I|L}{M(Oxidation (M))|F}{I|L}{I|L}P{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}P{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}P{[C(Carbamidomethyl (C))G]|[NC]}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}C[NP]{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}{[QG]|[NA]}E{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}[TA][PA]S{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}CQ[VP];{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}C{I|L}[NP] 5.423;5.2026;5.1348;4.9145;4.9145;4.3381;4.194;3.9651;3.7128;3.669 -;-;-;-;-;-;-;-;-;- 573 + 1 1.216 46614.6 1.0 10333 4908 15236 HBL1_DMSO_200M_050219_2,15243 HBL1_DMSO_200M_050219_2,15243,LPSLTMLASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15244 80.198 32.0 1558600.0 25 0 173590.0 + 10037 FPNIHPPQI 9 90 531.7903472200135 1061.5661415068269 2 531.7903930544853 MULTI CID FTMS 0 0 0 15236 1406692.75 1.0 0 0.0 8 Unmodified _FPNIHPPQI_ ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-3|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 58.6788170122104 0.0268135626297836 4 {M(Oxidation (M))|F}PN{I|L}HPPQ{I|L} 9 0 + 60.39 0.0 0.0 5.6888 5.6888 84.421 0.0 0.0 0.0 23.76918465971854 14.09256854528806 14.09256854528806 9.208187539523747 0 1.079689690656103 0.0 0.0 0.3252574989159953 + + {M(Oxidation (M))|F}PN{I|L}HPPQ{I|L};{M(Oxidation (M))|F}PGG{I|L}HPPQ{I|L};{M(Oxidation (M))|F}PN{I|L}HPP[AG]{I|L};{M(Oxidation (M))|F}PN{I|L}HPPAAV;{M(Oxidation (M))|F}PGG{I|L}HPP[AG]{I|L};{M(Oxidation (M))|F}PGG{I|L}HPPAAV;{M(Oxidation (M))|F}PN[RN][KS]S{I|L};{M(Oxidation (M))|F}PN[RN][KS]TV;{M(Oxidation (M))|F}PN[RN][KT]SV 5.6888;4.8214;4.515;3.8565;3.6517;2.9932;1.3555;0.6971;0.62876 +;-;-;-;-;-;-;-;- + 407 + 1 1.216 45344.7 1.0 10334 4908 15236 HBL1_DMSO_200M_050219_2,15244 HBL1_DMSO_200M_050219_2,15244,FPNIHPPQI True True FPNIHPPQI 80.197807 531.790393054485 53650076.0 15236.0 ENSG00000182149|ENST00000378799|IST1;;nc|ENSG00000182149|P53990|IST1;;nc|ENSG00000182149|P53990-6|IST1;;nc|ENSG00000182149|P53990-3|IST1;;nc|ENSG00000182149|P53990-5|IST1 7.907228469848633 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15245 80.199 26.0 1541700.0 25 0 131180.0 + -1 PKEMKKMDL 9 79 568.2978247350383 1134.5810965368764 2 568.3000976443291 MULTI CID FTMS 0 0 0 15236 1365503.875 0.4773302006625101 2 -0.2590789794921875 9 Oxidation (M) _PKEM(Oxidation (M))KKMDL_ REV__ENSG00000133318|ENST00000377819|RTN3;REV__nc|ENSG00000133318|O95197-2|RTN3 10.823927491677226 0.5436922275383211 4 V{I|L}R{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 5 -1 19.208 0.0 0.0 1.693 0.0 0.0 487.2108631818375 0.0 487.2108631818375 0.0 5.580824061503975 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}R{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 1.693 - 117 1 1.216 39010.1 1.0 10335 4908 15236 HBL1_DMSO_200M_050219_2,15245 HBL1_DMSO_200M_050219_2,15245,PKEMKKMDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15246 80.201 59.0 665780.0 25 0 55100.0 -1 0 54 785.6787592391347 2354.014448317604 3 786.0139648318291 MULTI CID FTMS 0 0 0 15236 1241243.0 0.4958310014664297 1 -0.0892486572265625 10 4 YY[W{I|L}]{I|L} 5 -1 21.707 0.0 0.0 0.92213 0.0 0.0 0.0 1612.6089874569868 1612.6089874569868 5.253312076568903 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 YY[W{I|L}]{I|L} 0.92213 - 47 1 1.216 52413.8 1.0 10336 4908 15236 HBL1_DMSO_200M_050219_2,15246 HBL1_DMSO_200M_050219_2,15246, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15247 80.202 49.0 915950.0 25 0 121910.0 + + 36323 KMDEVLYSI 9 69 549.280479538439 1096.5464061436778 2 549.2810546755791 MULTI CID FTMS 0 0 0 15236 881958.4375 0.9820807061738012 1 -0.0892486572265625 11 Unmodified _SYLTDIWSL_ ENSG00000141759|ENST00000269601|TXNL4A 28.486842064014134 0.1687311288560894 4 V{I|L}YS{I|L} 5 -1 28.456 0.0 0.0 2.595 0.0 0.0 503.20637709785314 0.0 503.20637709785314 0.0 4.982653242032455 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 V{I|L}YS{I|L} 2.595 - 130 1 1.216 40778.4 1.0 10337 4908 15236 HBL1_DMSO_200M_050219_2,15247 HBL1_DMSO_200M_050219_2,15247,SYLTDIWSL False False KMDEVLYSI 80.201815 549.281054675579 7745435.5 15236.0 ENSG00000141759|ENST00000269601|TXNL4A 4.523288408915202 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15248 80.205 166.0 744240.0 25 0 52522.0 + 26656 NYIDRFLSSM 10 111 631.2969722257485 1260.579391518297 2 631.2977172732353 MULTI CID FTMS 0 0 0 15236 652135.1875 0.3717395364294423 2 -0.2590789794921875 12 Oxidation (M) _NYIDRFLSSM(Oxidation (M))_ ENSG00000145386|ENST00000274026|CCNA2 85.76441949171179 0.012343647646002 4 [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F} 10 0 + 78.128 0.0 0.0 6.1978 6.1978 90.83 0.0 0.0 0.0 24.88438100576431 49.41601725275058 24.88438100576431 28.994112934271143 0 2.579689690656103 2.0 0.0 0.6747425010840047 + + [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F};[YN]{I|L}DR{M(Oxidation (M))|F}{[WT]|[RM]}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}AR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}[VS]DR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[YG]DR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F};[HD]S{I|L}[EC]T{I|L}{I|L}[KC];[YN]{I|L}DR[KS]D[HN];{[CT]|[{M(Oxidation (M))|F}G]}{[ET]|[MV]}AR{M(Oxidation (M))|F}{I|L}SS{M(Oxidation (M))|F};[HD]D{I|L}{[CT]|[{M(Oxidation (M))|F}G]}T{I|L}{I|L}[KC];[HD]S{I|L}{M(Oxidation (M))|F}RA{[QG]|[NA]}[KC] 6.1978;3.8977;3.277;3.148;2.8899;2.5808;2;1.9751;1.9356;1.7218 +;-;-;-;-;-;-;-;-;- + 875 1 1.216 99043.9 1.0 10338 4908 15236 HBL1_DMSO_200M_050219_2,15248 HBL1_DMSO_200M_050219_2,15248,NYIDRFLSSM True False NYIDRFLSSM 80.205088 631.297717273235 25453796.0 15236.0 ENSG00000145386|ENST00000274026|CCNA2 9.054673830668133 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15249 80.207 105.0 797900.0 25 0 93823.0 + 34905 SQIEADFRL 9 87 539.7801363315979 1077.5457197299957 2 539.7810546755791 MULTI CID FTMS 0 0 0 15236 528956.125 0.032950613025679 5 -0.53570556640625 13 Unmodified _SQIEADFRL_ ENSG00000198900|ENST00000361337|TOP1 40.23920728925047 0.0741434193262949 4 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}] 9 2 + 61.66 0.0 0.0 5.7223 5.7223 77.634 0.0 0.0 0.0 15.686362358410122 3.553876579865744 3.553876579865744 3.553876579865744 0 1.0 0.8538719643217619 0.4247425010840047 0.0 {[QS]|[NT]}{I|L}EAD{I|L}[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}EAD{M(Oxidation (M))|F}R{I|L};{[QS]|[NT]}[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}[KP]PV 5.7223;5.3925;0.63316 -;+;- + 203 + 1 1.216 72358.3 1.0 10339 4908 15236 HBL1_DMSO_200M_050219_2,15249 HBL1_DMSO_200M_050219_2,15249,SQIEADFRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15250 80.216 510.0 870990.0 25 0 59540.0 + 29721 QPLLVRPTL 9 235 518.8288676999416 1035.6431824666831 2 518.8285400271416 MULTI CID FTMS 0 0 0 15236 343366.40625 0.7274811697962227 -1 0.101654052734375 14 Unmodified _QPLLVRPTL_ REV__ENST00000481262.6_1_15:40705272-40727929:+|nuORF;REV__ENST00000491554.6_1_15:40716399-40727929:+|nuORF 34.93206674587334 0.1032771302489716 4 TV{I|L}[WR]T{I|L} 7 -1 36.278 0.0 0.0 3.5029 0.0 0.0 148.11783556525876 0.0 148.11783556525876 0.0 6.564910807848776 0.0 0.0 0 0.5 0.0 1.059894379144197 0.0 TV{I|L}[WR]T{I|L} 3.5029 - 1591 + 1 1.216 332204.9 1.0 10340 4908 15236 HBL1_DMSO_200M_050219_2,15250 HBL1_DMSO_200M_050219_2,15250,QPLLVRPTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15251 80.226 534.0 453140.0 25 0 56795.0 + 35783 SVIPVINKI 9 163 491.8183613547443 981.6221697762886 2 491.8188659548759 MULTI CID FTMS 0 0 0 15236 339122.28125 0.2557222916595972 2 -0.2590789794921875 15 Unmodified _SVIPVINKI_ ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF 61.357469665136826 0.0253304979873734 4 [VS]{I|L}PV{I|L}QKV 9 2 + 75.792 0.0 0.0 7.7211 7.7211 84.441 0.0 0.0 0.0 17.16946674220476 3.5654732351381284 3.5654732351381284 3.5654732351381284 0 0.9247425010840048 1.5228787452803376 0.0 1.1886218330464626 [VS]{I|L}PV{I|L}QKV;[VS]{I|L}PV{I|L}QVK;[VS]{I|L}PV{I|L}NK{I|L};[VS]{I|L}PV{I|L}[AG]KV;[VS]{I|L}PV{I|L}KN{I|L};[VS]{I|L}PV{I|L}[AG]VK;[VS]{I|L}PV{I|L}N{I|L}K;[VS]{I|L}PV{I|L}GGK{I|L};[VS]{I|L}PV{I|L}KQV;[VS]{I|L}{I|L}[VP]QKV 7.7211;7.3578;7.2124;6.783;6.6859;6.4198;6.4016;6.2744;6.2383;5.9189 -;-;+;-;-;-;-;-;-;- + 1438 + 1 1.216 184553.4 1.0 10341 4908 15236 HBL1_DMSO_200M_050219_2,15251 HBL1_DMSO_200M_050219_2,15251,SVIPVINKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15252 80.236 603.0 115900.0 25 0 16751.0 -1 0 67 1155.46513185326 0 1155.465502917767 PEAK CID FTMS 0 0 0 15236 304823.46875 1.0 0 0.0 16 4 E 1 -1 6.9897 0.0 0.0 0.30273 0.0 0.0 1652.6869258320564 524.1629122369749 2176.849838069031 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.30273 - 55 + 1 1.216 57946.9 1.0 10342 4908 15236 HBL1_DMSO_200M_050219_2,15252 HBL1_DMSO_200M_050219_2,15252, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15253 80.246 523.0 321280.0 25 0 25104.0 + 45533 YTFPLAEKV 9 200 534.7938767826192 0 534.7483398318291 PEAK CID FTMS 0 0 0 15236 93229.0 0.9635309089291296 -3 0.3240432739257812 17 Unmodified _YTVSRRSSL_ ENSG00000089157|ENST00000392514|RPLP0;nc|ENSG00000089157|P05388-2|RPLP0 15.847184025352805 0.2451986057151378 4 {M(Oxidation (M))|F}P{I|L}AE 5 9 9.1558 0.0 0.0 0.85762 0.0 0.0 265.1110062598378 242.15192590885 507.2629321686878 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 {M(Oxidation (M))|F}P{I|L}AE 0.85762 - 492 + 1 1.216 127788.4 1.0 10343 4908 15236 HBL1_DMSO_200M_050219_2,15253 HBL1_DMSO_200M_050219_2,15253,YTVSRRSSL False True YTFPLAEKV 80.245532 534.748339831829 2046414.5 15236.0 ENSG00000089157|ENST00000392514|RPLP0;;nc|ENSG00000089157|P05388-2|RPLP0 5.598062833150228 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15254 80.25 245.0 403200.0 25 0 51531.0 + -1 LAEMEMSL 8 128 478.2094409348333 954.4043289364666 2 478.7418090701103 MULTI CID FTMS 0 0 0 15236 101273.046875 0.2244166149610268 -15 1.6285324096679688 18 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 10.183394434864962 0.7604730176254005 4 {I|L} 1 -1 14.604 0.0 0.0 1.5302 0.0 0.0 823.3092494460354 0.0 823.3092494460354 0.0 4.225490200071285 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5302 + + 296 + 1 1.216 79692.0 1.0 10344 4908 15236 HBL1_DMSO_200M_050219_2,15254 HBL1_DMSO_200M_050219_2,15254,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15255 80.262 635.0 82700.0 25 0 8930.8 + 42630 VTTTKGFP 8 88 425.7389232316359 0 425.7389099001884 PEAK CID FTMS 0 0 0 15236 289973.25 1.0 0 0.0 19 Unmodified _VTTTKGFP_ REV__ENSG00000029559|ENST00000226284|IBSP 8.593279151180031 0.5573742999696857 4 A 1 -1 6.9897 0.0 0.0 0.82284 0.0 0.0 99.06627664916525 676.3358752451203 775.4021518942856 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.82284 - 12 + 1 1.216 45387.5 1.0 10345 4908 15236 HBL1_DMSO_200M_050219_2,15255 HBL1_DMSO_200M_050219_2,15255,VTTTKGFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15256 80.272 554.0 262650.0 25 0 36744.0 + 14293 IEKLLYKLSS 10 159 597.3585640874073 1192.7025752416146 2 597.3594238162041 MULTI CID FTMS 0 0 0 15236 276896.03125 0.7955409456090642 -1 0.101654052734375 20 Unmodified _IEKLLYKLSS_ REV__ENSG00000183439|ENST00000710271|TRIM61 11.494710602746466 0.654671931888957 4 [VG]AQE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L} 10 -1 34.065 0.0 0.0 2.8561 0.0 0.0 0.0 109.08572888835208 109.08572888835208 20.35335007137462 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.3252574989159953 [VG]AQE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L} 2.8561 - 884 1 1.216 109493.4 1.0 10346 4908 15236 HBL1_DMSO_200M_050219_2,15256 HBL1_DMSO_200M_050219_2,15256,IEKLLYKLSS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15258 80.276 2.8 18152000.0 25 0 1927900.0 23712 LTTRPSESKT 10 80 560.3015854213894 1118.5886179095787 2 560.3028442263603 MULTI CID FTMS 0 0 0 15257 20267062.0 0.1496418736183254 5 -0.5372695922851562 1 Unmodified _LTTRPSESKT_ ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1 13.042465956692816 0.6287021003332052 4 [VP]SGMV{I|L}T{I|L} 9 9 41.519 0.0 0.0 3.7118 0.0 0.0 0.0 218.06277497428496 218.06277497428496 24.56436953470206 0.0 0.0 0.0 0 0.0 0.721246399047171 0.5 0.0 [VP]SGMV{I|L}T{I|L} 3.7118 - 682 1 1.199 42850.8 1.0 10347 4909 15257 HBL1_DMSO_200M_050219_2,15258 HBL1_DMSO_200M_050219_2,15258,LTTRPSESKT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15259 80.277 5.1 8568800.0 25 0 780880.0 + 8453 ESRLVNGNASV 11 79 573.3003879927538 1144.5862230523076 2 573.3011962771416 MULTI CID FTMS 0 0 0 15257 10694828.0 0.6041733656889992 1 -0.169830322265625 2 Unmodified _ESRLVNGNASV_ REV__ENSG00000072958|ENST00000291439|AP1M1;REV__ENST00000586461.1_1_19:16319820-16337387:+|nuORF;REV__nc|ENSG00000072958|Q9BXS5-2|AP1M1 13.042465956692816 0.7638483625850725 4 GGQ{M(Oxidation (M))|F} 4 -1 35.26 0.0 0.0 3.0806 0.0 0.0 0.0 752.3917704978732 752.3917704978732 7.252418953882049 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.4247425010840047 GGQ{M(Oxidation (M))|F} 3.0806 - 197 1 1.199 42124.9 1.0 10348 4909 15257 HBL1_DMSO_200M_050219_2,15259 HBL1_DMSO_200M_050219_2,15259,ESRLVNGNASV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15260 80.279 5.6 10995000.0 25 0 2203000.0 + 40698 VLGERIVIV 9 75 499.32399994952107 996.6334469658422 2 499.3241149783134 MULTI CID FTMS 0 0 0 15257 10879885.0 0.6816238531776725 1 -0.169830322265625 3 Unmodified _VLGERIVIV_ ENSG00000175946|ENST00000684634|KLHL38 29.081581746732265 0.1611639662936252 4 TV{I|L}V 4 6 44.993 0.0 0.0 4.5145 0.0 0.0 566.3554554669937 0.0 566.3554554669937 0.0 38.00312209084183 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 TV{I|L}V 4.5145 - 196 1 1.199 53157.0 1.0 10349 4909 15257 HBL1_DMSO_200M_050219_2,15260 HBL1_DMSO_200M_050219_2,15260,VLGERIVIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15261 80.28 13.0 5399500.0 25 0 1729100.0 + + 7131 YYYDGDIGNYYY 12 76 784.8142184085751 1567.6138838839502 2 784.8151122927666 MULTI CID FTMS 0 0 0 15257 5033697.5 0.8474637693359283 -1 0.0892486572265625 4 Unmodified _EEMWLDQEYYY_ ENSG00000196591|ENST00000519065|HDAC2;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 17.11289562659939 0.6791789249425932 4 YYYDGD{I|L}GNYYY 12 -1 + 80.829 0.0 0.0 5.1562 5.1562 69.932 0.0 0.0 0.0 23.802112417116064 10.62977812912628 10.62977812912628 0.7918124604762511 0 0.7429928190999391 2.0 0.7614393726401688 0.8494850021680094 YYYDGD{I|L}GNYYY;YYDYGD{I|L}GNYYY;YYYDGD{[{M(Oxidation (M))|F}H]|[RQ]}YYY;YYDYGD{[{M(Oxidation (M))|F}H]|[RQ]}YYY;YYD[DG]Y{I|L}GNYYY;YYYDGD{I|L}GGGYYY;YYDYGD{I|L}GGGYYY;YYYDG{[RE]|[WV]}NYYY;YYDYG{[RE]|[WV]}NYYY;{[YD]|[{M(Oxidation (M))|F}M]}YYGD{I|L}GNYYY 5.1562;5.1057;4.2267;4.1762;4.0511;4.0339;3.9834;3.7918;3.7413;3.6378 -;-;-;-;-;-;-;-;-;- 2153 1 1.199 56997.5 1.0 10350 4909 15257 HBL1_DMSO_200M_050219_2,15261 HBL1_DMSO_200M_050219_2,15261,EEMWLDQEYYY False False YYYDGDIGNYYY 80.279856 784.815112292767 134817104.0 15257.0 ENSG00000196591|ENST00000519065|HDAC2;;ENST00000520170.1_1_6:114281018-114292096:-|nuORF;;ENST00000521233.1_1_6:114279792-114292096:-|nuORF 4.238866488138835 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15262 80.281 48.0 1291800.0 25 0 158560.0 + 16890 KIFSGVFVKV 10 74 375.2341629711614 1122.6806595136843 3 375.2339660525322 MULTI CID FTMS 0 0 0 15257 1074363.125 0.8271601195666192 1 -0.169830322265625 5 Unmodified _KIFSGVFVKV_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 21.53697664764585 0.484802182336468 4 V{[MG]|[TS]}VVK 6 6 28.919 0.0 0.0 2.5759 0.0 0.0 491.3102282319796 0.0 491.3102282319796 0.0 17.950397039808763 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.4802046884880938 V{[MG]|[TS]}VVK 2.5759 - 126 + 1 1.199 64315.4 1.0 10351 4909 15257 HBL1_DMSO_200M_050219_2,15262 HBL1_DMSO_200M_050219_2,15262,KIFSGVFVKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15263 80.283 81.0 799870.0 25 0 62477.0 + 10527 FVDPAQITM 9 89 511.2545127153543 1020.4944724975086 2 511.2553893923759 MULTI CID FTMS 0 0 0 15257 864337.0 0.1812938663923708 4 -0.4464569091796875 6 Unmodified _FVDPAQITM_ ENSG00000167325|ENST00000300738|RRM1 29.081581746732265 0.1611639662936252 4 [{I|L}T]{M(Oxidation (M))|F}PAQ{I|L}TM 9 3 + 47.809 0.0 0.0 4.6849 4.6849 80.241 0.0 0.0 0.0 11.760912590556806 11.0827208845118 11.0827208845118 9.208187539523747 0 0.8935078169319297 1.3010299956639813 0.0 0.0 [{I|L}T]{M(Oxidation (M))|F}PAQ{I|L}TM;[{I|L}T]{M(Oxidation (M))|F}PA[AG]{I|L}TM;[{M(Oxidation (M))|F}V]DPAQ{I|L}TM;[{I|L}T][WE]Q{I|L}TM;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}QAP{M(Oxidation (M))|F}PV;[{I|L}T]Q[WE]{I|L}TM;[KG]D[QT]Q{I|L}TM;[{I|L}T]Q[PA]{M(Oxidation (M))|F}{I|L}TM;[KG]D{[SA]|[TG]}AQ{I|L}TM;[{M(Oxidation (M))|F}V]DPA[AG]{I|L}TM 4.6849;3.7826;3.5324;3.4876;3.2711;2.9044;2.7404;2.7111;2.6956;2.6301 -;-;+;-;-;-;-;-;-;- + 522 1 1.199 55854.9 1.0 10352 4909 15257 HBL1_DMSO_200M_050219_2,15263 HBL1_DMSO_200M_050219_2,15263,FVDPAQITM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15264 80.287 191.0 322150.0 25 0 26752.0 + -1 MGFLLFKGILP 11 91 626.3617325483765 1250.708912163553 2 626.3628417849541 MULTI CID FTMS 0 0 0 15257 477110.53125 1.0 0 0.0 7 Oxidation (M) _M(Oxidation (M))GFLLFKGILP_ REV__ENSG00000135902|ENST00000258385|CHRND;REV__nc|ENSG00000135902|Q07001-2|CHRND 5.731851221503515 0.8481046878870278 4 {[MG]|[TS]}Y{I|L}Q 5 -1 16.923 0.0 0.0 1.3531 0.0 0.0 0.0 655.415380282874 655.415380282874 5.708705367622427 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 {[MG]|[TS]}Y{I|L}Q 1.3531 - 60 + 1 1.199 52136.5 1.0 10353 4909 15257 HBL1_DMSO_200M_050219_2,15264 HBL1_DMSO_200M_050219_2,15264,MGFLLFKGILP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15265 80.291 228.0 462680.0 25 0 78053.0 20318 LLESNKDLLL 10 124 579.3421821795297 1156.6698114258593 2 579.3433105349541 MULTI CID FTMS 0 0 0 15257 369664.5 1.0 0 0.0 8 Unmodified _LLESNKDLLL_ ENSG00000168003|ENST00000338663|SLC3A2;ENST00000457660.6_1_11:62649366-62653989:+|nuORF;ENST00000535768.1_1_11:62651934-62652955:+|nuORF;ENST00000538682.5_1_11:62651934-62653989:+|nuORF;nc|ENSG00000168003|P08195-3|SLC3A2;nc|ENSG00000168003|P08195-4|SLC3A2;nc|ENSG00000168003|P08195-5|SLC3A2;nc|ENSG00000168003|P08195|SLC3A2 36.12702656103203 0.1984647928738587 4 AGT{I|L}{I|L}{I|L} 6 7 63.321 0.0 0.0 5.4744 0.0 0.0 570.2879505841812 0.0 570.2879505841812 0.0 52.3514532483668 0.0 0.0 0 0.8807196863200843 0.0 1.274227503252014 0.0 AGT{I|L}{I|L}{I|L} 5.4744 - 387 1 1.199 84087.4 1.0 10354 4909 15257 HBL1_DMSO_200M_050219_2,15265 HBL1_DMSO_200M_050219_2,15265,LLESNKDLLL False True KALEEAGTILL 80.290983 579.343310534954 2839144.25 15257.0 ENST00000461731.5_1_2:220094544-220099084:+|nuORF;;ENSG00000163516|ENST00000323348|ANKZF1;;ENST00000465550.5_1_2:220096537-220099084:+|nuORF 4.282037099202474 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15266 80.302 637.0 370390.0 25 0 85909.0 + 21085 LPAGINSIV 9 153 442.2658559720392 882.5171590108785 2 442.2658569216728 MULTI CID FTMS 0 0 0 15257 331738.96875 0.7502449366853775 -1 0.0892486572265625 9 Unmodified _LPAGINSIV_ ENSG00000047315|ENST00000314595|POLR2B 46.92087301778293 0.0471210510596396 4 [{I|L}P]Q{I|L}NS{I|L}V 8 2 + 49.517 0.0 0.0 5.6109 5.6109 72.552 0.0 0.0 0.0 2.552725051033065 7.786596949921218 2.552725051033065 1.2320406081154545 0 0.6435078169319297 1.5228787452803376 0.5 0.0 [{I|L}P]Q{I|L}NS{I|L}V;[{I|L}P]QNS{I|L}{I|L}V;[{I|L}P]AG{I|L}NS{I|L}V;[{I|L}P]QN{I|L}S{I|L}V;[{I|L}P]AGNS{I|L}{I|L}V;[{I|L}A]PG{I|L}NS{I|L}V;[{I|L}P]AGN{I|L}S{I|L}V;[{I|L}A]PGNS{I|L}{I|L}V;[{I|L}A]PGN{I|L}S{I|L}V;[{I|L}P]Q{I|L}GGS{I|L}V 5.6109;5.4713;5.4632;5.381;5.3236;5.3217;5.2333;5.182;5.0917;4.5614 -;-;+;-;-;-;-;-;-;- + 1381 1 1.199 186002.2 1.0 10355 4909 15257 HBL1_DMSO_200M_050219_2,15266 HBL1_DMSO_200M_050219_2,15266,LPAGINSIV True True LPAGINSIV 80.302085 442.265856921673 3720267.25 15257.0 ENSG00000047315|ENST00000314595|POLR2B 3.437597115834554 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15267 80.307 250.0 432640.0 25 0 48730.0 + 4522 DAYLQSLAKKI 11 106 417.2431043961486 1248.707483788646 3 417.2434875369072 MULTI CID FTMS 0 0 0 15257 306155.8125 1.0 0 0.0 10 Unmodified _DAYLQSLAKKI_ ENSG00000148296|ENST00000372022|SURF6 40.72490554402381 0.2012291192650359 4 {[DA]|[EG]}Y{I|L}QS{I|L}AKK{I|L} 11 0 + 83.116 0.0 0.0 6.6562 6.6562 86.399 0.0 0.0 0.0 53.48528644210712 11.179866961539815 11.179866961539815 8.26606256887672 0 0.7742275032520141 1.6989700043360187 0.3494850021680094 0.6989700043360187 + + {[DA]|[EG]}Y{I|L}QS{I|L}AKK{I|L};{[DA]|[EG]}{I|L}YQS{I|L}AKK{I|L};{[DA]|[EG]}Y{I|L}[AG]S{I|L}AKK{I|L};{[DA]|[EG]}{I|L}Y[AG]S{I|L}AKK{I|L};WY{I|L}QS{I|L}{I|L}{I|L}T{I|L};W{I|L}YQS{I|L}{I|L}{I|L}T{I|L};WY{I|L}[AG]S{I|L}{I|L}{I|L}T{I|L};W{I|L}Y[AG]S{I|L}{I|L}{I|L}T{I|L} 6.6562;5.9942;5.9251;5.2632;4.7322;4.0703;3.5979;2.9359 +;-;-;-;-;-;-;- + 379 + 1 1.199 93750.4 1.0 10356 4909 15257 HBL1_DMSO_200M_050219_2,15267 HBL1_DMSO_200M_050219_2,15267,DAYLQSLAKKI False True DAYLQSLAKKI 80.306733 417.243487536907 11280638.25 15257.0 ENSG00000148296|ENST00000372022|SURF6 7.194217681884766 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15268 80.319 697.0 352650.0 25 0 28329.0 -1 PRFCEMCCDCR 11 127 803.7880824544119 1605.5616119756237 2 803.7881347537041 MULTI CID FTMS 0 0 0 15257 233626.328125 0.9558862169432554 1 -0.169830322265625 11 4 Carbamidomethyl (C),Oxidation (M) _PRFC(Carbamidomethyl (C))EM(Oxidation (M))C(Carbamidomethyl (C))C(Carbamidomethyl (C))DC(Carbamidomethyl (C))R_ ENSG00000154845|ENST00000400556|PPP4R1;ENST00000285124.12_1_18:9562972-9595043:-|nuORF;nc|ENSG00000154845|Q8TF05-2|PPP4R1 0.0 0.8751479354844584 4 YYYDGD{I|L}CY[DG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 13 -1 + 99.633 0.0 0.0 6.2055 6.2055 85.241 0.0 0.0 0.0 78.83149789778489 3.164575717055513 3.164575717055513 9.030899869919438 0 1.079689690656103 2.0 1.916386562212267 0.0 YYYDGD{I|L}CY[DG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};YYYDGD{I|L}C[DG]Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};YYYDGD{I|L}[C(Carbamidomethyl (C))D]Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};YYYD{[RE]|[WV]}CY[DG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};YYYD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EY[DG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};YYYD{[RE]|[WV]}C[DG]Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};YYYD{[RE]|[WV]}[C(Carbamidomethyl (C))D]Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};YYYDYN[C(Carbamidomethyl (C))N][DG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};YYYDG{[DS]|[MA]|[CV]|TT}EY[DG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};YYYD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E[DG]Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 6.2055;5.643;5.6043;5.3279;4.858;4.7654;4.7286;4.5926;4.5845;4.2955 -;-;-;-;-;-;-;-;-;- 1454 + 1 1.199 168159.8 1.0 10357 4909 15257 HBL1_DMSO_200M_050219_2,15268 HBL1_DMSO_200M_050219_2,15268,PRFCEMCCDCR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15269 80.332 773.0 171420.0 25 0 11951.0 + 5228 DIYNSDPLI 9 108 1049.5110112063066 1048.5037347397067 1 1050.510424792767 MULTI CID FTMS 0 0 0 15257 215654.375 1.0 0 0.0 12 Unmodified _DIYNSDPLI_ ENSG00000074416|ENST00000265052|MGLL;nc|ENSG00000074416|Q99685-2|MGLL;nc|ENSG00000074416|Q99685|MGLL 47.594388314883695 0.0456443387682827 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}A{I|L}D[{I|L}P]{I|L} 9 5 + 39.86 0.0 0.0 3.8016 3.8016 63.954 0.0 0.0 0.0 0.4216561218376569 5.30394370788877 0.4216561218376569 0.4216561218376569 0 1.048455006504028 0.0 0.6549471895720984 1.3494850021680094 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}A{I|L}D[{I|L}P]{I|L};{NN|[MP]|[D{I|L}]|[EV]}YNSD[{I|L}P]{I|L};[YN]EVSD[{I|L}P]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}YVSD[{I|L}P]{I|L};{NN|[MP]|[D{I|L}]|[EV]}YGGSD[{I|L}P]{I|L};{NN|[MP]|[D{I|L}]|[EV]}YNAAA{I|L}[QA];{NN|[MP]|[D{I|L}]|[EV]}YNAARN{I|L};{NN|[MP]|[D{I|L}]|[EV]}YN{[NV]|[RG]}{I|L}[QA];YNMPSDP{I|L}{I|L};Y[RH]SVE{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 3.8016;3.7614;3.3509;2.8959;2.8832;1.8559;1.8455;1.688;1.5442;1.5367 -;+;-;-;-;-;-;-;-;- + 2410 1 1.199 91738.9 1.0 10358 4909 15257 HBL1_DMSO_200M_050219_2,15269 HBL1_DMSO_200M_050219_2,15269,DIYNSDPLI True True DIYNSDPLI 80.332277 1050.51042479277 1060324.125 15257.0 ENSG00000074416|ENST00000265052|MGLL;;nc|ENSG00000074416|Q99685-2|MGLL;;nc|ENSG00000074416|Q99685|MGLL 5.702549934387207 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15270 80.346 800.0 436010.0 25 0 43896.0 + -1 LAEMEMSL 8 217 478.2094409348333 954.4043289364666 2 478.7126953005791 MULTI CID FTMS 0 0 0 15257 190625.8125 0.4224184112703522 -14 1.4949951171875 13 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 15.768221252438446 0.6779680726941459 4 {[VA]|[{I|L}G]}D[{M(Oxidation (M))|F}V]{I|L}TP 8 -1 21.581 0.0 0.0 2.2612 0.0 0.0 0.0 108.9429237448734 108.9429237448734 2.93137271814366 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5189301784845296 0.0 {[VA]|[{I|L}G]}D[{M(Oxidation (M))|F}V]{I|L}TP 2.2612 - 1221 1 1.199 259488.9 0.9900000095367432 10359 4909 15257 HBL1_DMSO_200M_050219_2,15270 HBL1_DMSO_200M_050219_2,15270,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15271 80.36 706.0 192470.0 25 0 19317.0 19967 LIHIVWVDFP 10 148 619.8489828388092 1237.6834127444183 2 619.8505737185478 MULTI CID FTMS 0 0 0 15257 146788.5 0.6269643556934682 1 -0.169830322265625 14 Unmodified _LIHIVWVDFP_ ENST00000524463.5_1_11:88058155-88058308:-|nuORF 7.910154910731844 0.6900473968920092 4 [RN]{I|L}EHG[R{I|L}]M{I|L} 10 10 + 26.086 0.0 0.0 2.1077 2.1077 76.704 0.0 0.0 0.0 3.946401421594988 3.7445891282251473 3.7445891282251473 16.309361190641912 0 0.0 0.0 0.0 0.0 [RN]{I|L}EHG[R{I|L}]M{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[WY][R{I|L}]M{I|L};[RN]{I|L}[WH][R{I|L}]M{I|L};[RN]{I|L}[HK]{[ET]|[MV]}PM{I|L} 2.1077;0.78995;0.69365;0.43767 -;-;-;- 694 + 1 1.199 100617.3 1.0 10360 4909 15257 HBL1_DMSO_200M_050219_2,15271 HBL1_DMSO_200M_050219_2,15271,LIHIVWVDFP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15272 80.374 800.0 337930.0 25 0 26752.0 + 18865 LASQHEEL 8 234 309.49051870186247 925.4497267057876 3 309.4898864626884 MULTI CID FTMS 0 0 0 15257 148422.53125 0.3852214005499732 -2 0.1909027099609375 15 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 4 {I|L}{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 1.7779 0.0 0.0 647.3031923274444 0.0 647.3031923274444 0.0 2.4742501084004687 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.7779 - 478 1 1.199 213095.0 0.7900000214576721 10361 4909 15257 HBL1_DMSO_200M_050219_2,15272 HBL1_DMSO_200M_050219_2,15272,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15273 80.387 787.0 270740.0 25 0 13793.0 43412 WRCWTWPWREW 11 139 846.3876825095938 1690.7608120859877 2 846.3877441287041 MULTI CID FTMS 0 0 0 15257 136024.09375 0.2650687613457895 -1 0.0892486572265625 16 Unmodified _WRCWTWPWREW_ ENST00000374279.3_1_9:114659094-114659565:+|nuORF 0.3070304955306653 0.8736993455979228 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQDA{M(Oxidation (M))|F}YQ[{I|L}V] 14 12 + 132.7 0.0 0.0 7.8487 7.8487 62.571 0.0 0.0 0.0 3.9378080564517575 7.56961951313707 3.9378080564517575 0.0 0 1.089136830878453 1.5228787452803376 3.1025684359364405 3.921575367609922 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQDA{M(Oxidation (M))|F}YK[{I|L}V];[HQ]DEAQQDA{M(Oxidation (M))|F}YK[{I|L}V];[HQ]DEAQQDA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]QQDA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]QQDA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQDA{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]QDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]Q[AG]DA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]Q[AG]DA{M(Oxidation (M))|F}YK[{I|L}V] 7.8487;7.8487;7.6158;7.6158;7.3277;7.3277;7.3134;7.3134;7.3134;7.3134 -;-;-;-;-;-;-;-;-;- 35098 1 1.199 146467.6 1.0 10362 4909 15257 HBL1_DMSO_200M_050219_2,15273 HBL1_DMSO_200M_050219_2,15273,WRCWTWPWREW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15274 80.401 739.0 114460.0 25 0 8325.7 + -1 DCINCQYPSI 10 129 635.2669620991369 1268.5193712650737 2 635.2670776247978 MULTI CID FTMS 0 0 0 15257 122601.2109375 0.5923370994701903 -4 0.4132919311523437 17 2 Carbamidomethyl (C) _DC(Carbamidomethyl (C))INC(Carbamidomethyl (C))QYPSI_ REV__ENSG00000124782|ENST00000379938|RREB1;REV__nc|ENSG00000124782|Q92766-3|RREB1;REV__nc|ENSG00000124782|Q92766-5|RREB1;REV__nc|ENSG00000124782|Q92766|RREB1 9.38312468134398 0.6832340498775793 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G 3 -1 23.222 0.0 0.0 1.8306 0.0 0.0 0.0 964.3528728122018 964.3528728122018 4.232215770005713 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G 1.8306 - 558 1 1.199 65995.1 1.0 10363 4909 15257 HBL1_DMSO_200M_050219_2,15274 HBL1_DMSO_200M_050219_2,15274,DCINCQYPSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15275 80.415 800.0 233060.0 25 0 36753.0 + 4350 DASLVFKV 8 179 439.7525915049388 877.4906300766776 2 439.7531310915947 MULTI CID FTMS 0 0 0 15257 111462.2734375 0.0104953636633834 8 -0.849273681640625 18 Unmodified _DASLVFKV_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602816-23603164:-|nuORF 32.30548876998284 0.3644845974844379 4 {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV 8 0 + 36.836 0.0 0.0 4.1979 4.1979 79.49 0.0 0.0 0.0 5.593968746600673 4.67749455895931 4.67749455895931 9.814330403167162 0 0.6421590589602533 1.5228787452803376 0.0 0.1344005005252609 + + {[DA]|[EG]}S{I|L}V{M(Oxidation (M))|F}KV;{[DA]|[EG]}S{I|L}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}[YQ];{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}[YQ]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DYQ{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}[YQ];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D[YQ]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[DA]|[EG]}[KG][YV]{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VE[YQ] 4.1979;3.0794;3.0368;2.8392;2.8087;2.3507;2.1531;2.0948;2.0091;1.8794 +;-;-;-;-;-;-;-;-;- + 924 + 1 1.199 143016.6 0.8799999952316284 10364 4909 15257 HBL1_DMSO_200M_050219_2,15275 HBL1_DMSO_200M_050219_2,15275,DASLVFKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15276 80.427 701.0 83733.0 25 0 8292.5 + 14870 ILINDAGEVRL 11 106 606.8495971560478 0 606.8495971560478 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _ILINDAGEVRL_ ENSG00000104814|ENST00000396857|MAP4K1;nc|ENSG00000104814|Q92918|MAP4K1 20.580933911654288 0.3457670270461843 4 E{I|L}{I|L}SG 5 8 20.635 0.0 0.0 1.703 0.0 0.0 494.310448118933 215.0832460992797 709.3936942182128 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 E{I|L}{I|L}SG 1.703 - 182 + 1 1.199 48141.2 1.0 10365 4909 15257 HBL1_DMSO_200M_050219_2,15276 HBL1_DMSO_200M_050219_2,15276,ILINDAGEVRL False True ILINDAGEVRL 80.427272 606.849597156048 1456640.25 15257.0 nc|ENSG00000104814|Q92918|MAP4K1;;ENSG00000104814|ENST00000396857|MAP4K1 4.842562834421794 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15277 80.442 781.0 130040.0 25 0 11077.0 -1 MCDQCCVCQDL 11 104 752.7552368044853 0 752.7552368044853 PEAK CID FTMS 0 0 0 -1 0 20 4 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))DQC(Carbamidomethyl (C))C(Carbamidomethyl (C))VC(Carbamidomethyl (C))QDL_ ENST00000504260.5_1_17:47783523-47784713:-|nuORF;ENST00000508607.1_1_17:47783523-47785148:-|nuORF 0.3506318815782774 0.47618401536486 4 {I|L}TQ{M(Oxidation (M))|F}H 5 -1 24.493 0.0 0.0 1.6291 0.0 0.0 769.1510242908081 104.99923883609608 874.1502631269042 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.8391368308784533 {I|L}TQ{M(Oxidation (M))|F}H 1.6291 - 396 + 1 1.199 77997.2 1.0 10366 4909 15257 HBL1_DMSO_200M_050219_2,15277 HBL1_DMSO_200M_050219_2,15277,MCDQCCVCQDL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15279 80.446 3.5 11915000.0 25 0 1525800.0 + 37309 TIRYPDPLI 9 57 544.3110889334554 1086.607624933711 2 544.8125488162041 MULTI CID FTMS 0 0 0 15278 9219881.0 0.9709535803427596 1 -0.050811767578125 1 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 49.55428908609986 0.0413471690215031 4 [{I|L}T]RY[DP]P{I|L}{I|L} 9 0 + 61.098 0.0 0.0 5.6228 5.6228 85.708 0.0 0.0 0.0 17.727562184969372 45.61297186186231 17.727562184969372 10.969100130080562 0 1.2302046884880935 1.6989700043360187 0.8494850021680094 0.0 + + [{I|L}T]RY[DP]P{I|L}{I|L};[{I|L}T][WM][{I|L}T]P{I|L}{I|L};{[NV]|[RG]}K[{I|L}T][WM]VP 5.6228;4.6133;1.5032 +;-;- + 77 1 1.179 38067.0 1.0 10367 4910 15278 HBL1_DMSO_200M_050219_2,15279 HBL1_DMSO_200M_050219_2,15279,TIRYPDPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15280 80.447 5.7 9553800.0 25 0 1368600.0 -1 ALMAAPLSL 9 77 451.75274496202985 901.4909369908596 2 451.7529174685478 MULTI CID FTMS 0 0 0 15278 11568104.0 0.890715887208725 -5 0.5831222534179688 2 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS[VP]T 9 -1 + 64.103 0.0 0.0 7.1107 7.1107 76.427 0.0 0.0 0.0 7.094625370097646 0.2680249241196719 0.2680249241196719 0.2680249241196719 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS[VP]T;[{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS[VP]T;[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}ASP[VP]T;[{I|L}A]{M(Oxidation (M))|F}ASP{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPAS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L} 7.1107;7.081;6.7768;6.7471;6.3238;5.9136;5.8839;5.6022;5.0427;4.9367 -;-;-;-;-;-;-;-;-;- 300 1 1.179 48117.2 1.0 10368 4910 15278 HBL1_DMSO_200M_050219_2,15280 HBL1_DMSO_200M_050219_2,15280,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15281 80.448 3.4 12626000.0 25 0 1833900.0 + 37310 TIRYPDPLI 9 57 544.3110889334554 1086.607624933711 2 544.3114501833916 MULTI CID FTMS 0 0 0 15278 15188872.0 0.9791548305733278 1 -0.050811767578125 3 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 36.506200033944 0.094635877243972 4 Y[DP]P{I|L}{I|L} 6 3 36.7 0.0 0.0 3.3775 0.0 0.0 370.23338515449376 0.0 370.23338515449376 0.0 22.095690636129888 0.0 0.0 0 0.805462187404089 0.0 0.8494850021680094 0.0 + Y[DP]P{I|L}{I|L} 3.3775 + + 31 1 1.179 39651.1 1.0 10369 4910 15278 HBL1_DMSO_200M_050219_2,15281 HBL1_DMSO_200M_050219_2,15281,TIRYPDPLI True True TIRYPDPLI 80.448495 544.311450183392 1287883840.0 15278.0 ENSG00000198034|ENST00000316084|RPS4X;;ENSG00000280969|ENST00000629237|RPS4Y2 5.9964752197265625 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15282 80.45 7.9 7377500.0 25 0 1122600.0 + 12686 GVLPNIQAV 9 87 455.771210605697 909.527868278194 2 455.7715331912041 MULTI CID FTMS 0 0 0 15278 7568799.5 0.2394191276815004 -3 0.3607330322265625 4 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 30.22481116460888 0.1466181017706357 4 [VG]QAPA 6 6 27.63 0.0 0.0 3.0378 0.0 0.0 0.0 383.2274281749316 383.2274281749316 12.936909460092004 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.3807196863200844 [VG]QAPA 3.0378 - 293 1 1.179 48161.7 1.0 10370 4910 15278 HBL1_DMSO_200M_050219_2,15282 HBL1_DMSO_200M_050219_2,15282,GVLPNIQAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15283 80.451 6.2 6591900.0 25 0 576050.0 + 34564 SPFPDIPKV 9 59 500.2790378955102 998.5435228578204 2 500.2785522341728 MULTI CID FTMS 0 0 0 15278 6378767.5 0.5863355669558681 -3 0.3607330322265625 5 Unmodified _SPFPDIPKV_ ENSG00000102699|ENST00000381989|PARP4;ENST00000435945.1_1_Y:28761086-28769767:-|nuORF;ENST00000446672.2_1_13:19955792-19968894:+|nuORF 29.081581746732265 0.1611639662936252 4 [PS]{M(Oxidation (M))|F} 3 6 32.676 0.0 0.0 3.2724 0.0 0.0 0.0 664.3665568756517 664.3665568756517 18.56463562245377 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.3494850021680094 0.0 + [PS]{M(Oxidation (M))|F} 3.2724 + + 47 1 1.179 35734.8 1.0 10371 4910 15278 HBL1_DMSO_200M_050219_2,15283 HBL1_DMSO_200M_050219_2,15283,SPFPDIPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15284 80.452 13.0 1201600.0 25 0 114950.0 -1 0 38 881.9053212946873 1761.7960896561744 2 881.9063598513603 MULTI CID FTMS 0 0 0 15278 4222869.5 0.7740242946295479 1 -0.050811767578125 6 4 {M(Oxidation (M))|F}WQQE[KC]{[WS]|[C(Carbamidomethyl (C)){I|L}]} 9 -1 31.884 0.0 0.0 1.8098 0.0 0.0 521.2827330215501 0.0 521.2827330215501 0.0 24.894549897933874 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}WQQE[KC]{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.8098 - 110 + 1 1.179 19968.6 1.0 10372 4910 15278 HBL1_DMSO_200M_050219_2,15284 HBL1_DMSO_200M_050219_2,15284, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15285 80.453 12.0 1161700.0 25 0 131920.0 -1 MLEQFLTI 8 40 505.7634486945394 1009.5123444558787 2 505.7635681033134 MULTI CID FTMS 0 0 0 15278 3885881.5 1.0 0 0.0 7 Oxidation (M) _M(Oxidation (M))LEQFLTI_ ENSG00000154957|ENST00000580306|ZNF18;nc|ENSG00000154957|P17022-2|ZNF18 5.760428011301431 0.7893668129297577 4 {I|L} 1 -1 13.099 0.0 0.0 1.2976 0.0 0.0 878.4172191890805 0.0 878.4172191890805 0.0 13.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2976 + + 5 + 1 1.179 19163.9 1.0 10373 4910 15278 HBL1_DMSO_200M_050219_2,15285 HBL1_DMSO_200M_050219_2,15285,MLEQFLTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15286 80.454 17.0 1006900.0 25 0 102910.0 + 44938 YPPWPGKIV 9 47 528.7980860103809 1055.5816190875616 2 528.7976562380791 MULTI CID FTMS 0 0 0 15278 3117978.25 0.2734625822871138 -10 1.1030654907226562 8 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 11.640296217721598 0.521594087909532 4 YP 2 7 44.776 0.0 0.0 4.2419 0.0 0.0 0.0 792.4432467096311 792.4432467096311 37.78659694992122 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + YP 4.2419 + + 8 + 1 1.179 20160.0 1.0 10374 4910 15278 HBL1_DMSO_200M_050219_2,15286 HBL1_DMSO_200M_050219_2,15286,YPPWPGKIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15287 80.456 22.0 665280.0 25 0 77846.0 + 16908 KIIGIMEEV 9 41 516.2934236755412 1030.5722944178824 2 516.2939330935478 MULTI CID FTMS 0 0 0 15278 2167139.75 0.9723403388995516 1 -0.050811767578125 9 Unmodified _KIIGIMEEV_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 4.3292370932331545 0.7635526921153418 4 V 1 8 13.979 0.0 0.0 1.3565 0.0 0.0 913.4927712629004 0.0 913.4927712629004 0.0 -2.218487496163561 -2.218487496163561 0.0 0 0.0 0.0 0.0 0.0 + V 1.3565 + + 6 + 1 1.179 23307.6 1.0 10375 4910 15278 HBL1_DMSO_200M_050219_2,15287 HBL1_DMSO_200M_050219_2,15287,KIIGIMEEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15288 80.457 27.0 3017500.0 25 0 579880.0 + 13215 HGMIMLRI 8 74 485.7693664773744 969.5241800215488 2 485.7698852419853 MULTI CID FTMS 0 0 0 15278 2050222.875 0.4959225387893234 -2 0.2590789794921875 10 Unmodified _HGMIMLRI_ ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1 93.88341677533236 0.0679596620250313 4 HGM{I|L}M{I|L}R{I|L} 8 0 + 83.247 0.0 0.0 8.5863 8.5863 89.156 0.0 0.0 0.0 57.04882300315205 19.240291242462064 19.240291242462064 6.153113369619305 0 2.1861818737241734 1.5228787452803376 0.0 0.805462187404089 + + HGM{I|L}M{I|L}R{I|L};HGM{I|L}{I|L}MR{I|L};HG{I|L}MM{I|L}R{I|L};HG{I|L}M{I|L}MR{I|L};{I|L}HGMM{I|L}R{I|L};H{I|L}GMM{I|L}R{I|L};{I|L}HGM{I|L}MR{I|L};H{I|L}GM{I|L}MR{I|L};{[HG]|PP}M{I|L}M[R{I|L}]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GHM[R{I|L}]{I|L} 8.5863;7.9517;7.8378;7.2031;6.0618;5.7513;5.4271;5.1166;4.2021;2.0393 +;-;-;-;-;-;-;-;+;- + 115 + 1 1.179 68146.2 1.0 10376 4910 15278 HBL1_DMSO_200M_050219_2,15288 HBL1_DMSO_200M_050219_2,15288,HGMIMLRI True True HGMIMLRI 80.456759 485.769885241985 52431212.0 15278.0 nc|ENSG00000095139|P48444-2|ARCN1;;ENSG00000095139|ENST00000264028|ARCN1 5.151934464772542 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15289 80.458 30.0 1425400.0 25 0 227250.0 + 1705 ALPLSEGTH 9 59 462.7437540417929 923.4729551503858 2 462.7439453005791 MULTI CID FTMS 0 0 0 15278 1611325.625 0.6108536442509854 -4 0.4410400390625 11 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 15.847184025352805 0.4077185912009129 4 [{I|L}A]P{I|L} 4 -1 38.94 0.0 0.0 4.2167 0.0 0.0 0.0 526.1879366510374 526.1879366510374 27.68110275043508 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.2167 + + 14 + 1 1.179 40303.5 1.0 10377 4910 15278 HBL1_DMSO_200M_050219_2,15289 HBL1_DMSO_200M_050219_2,15289,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15290 80.459 60.0 1088900.0 25 0 224680.0 + 23037 LSKQKKTDK 9 73 538.327417427765 1074.64028192233 2 538.3278076052666 MULTI CID FTMS 0 0 0 15278 1035292.4375 0.3329852784084262 -3 0.3607330322265625 12 Unmodified _LSKQKKTDK_ REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4 3.944395688203298 0.7769873103969335 4 {I|L} 1 -1 10.181 0.0 0.0 0.94739 0.0 0.0 943.545263467055 0.0 943.545263467055 0.0 3.1913608199120347 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.94739 + + 7 + 1 1.179 56687.1 1.0 10378 4910 15278 HBL1_DMSO_200M_050219_2,15290 HBL1_DMSO_200M_050219_2,15290,LSKQKKTDK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15291 80.461 56.0 696690.0 25 0 49055.0 + 5576 DMYEQFQNI 9 87 594.255079565318 1186.495606197436 2 594.2557250857353 MULTI CID FTMS 0 0 0 15278 1025082.1875 0.4110075382762683 1 -0.050811767578125 13 Unmodified _DMYEQFQNI_ ENSG00000100883|ENST00000216774|SRP54;ENST00000553923.1_1_14:35483969-35488318:+|nuORF;ENST00000556445.1_1_14:35487839-35488318:+|nuORF;nc|ENSG00000100883|P61011-2|SRP54 19.256988751693697 0.3154191944385105 4 [MD]Y{I|L} 4 5 28.672 0.0 0.0 2.4165 0.0 0.0 0.0 661.2566895316735 661.2566895316735 14.27440017027358 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MD]Y{I|L} 2.4165 - 145 1 1.179 33781.6 1.0 10379 4910 15278 HBL1_DMSO_200M_050219_2,15291 HBL1_DMSO_200M_050219_2,15291,DMYEQFQNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15292 80.467 327.0 315390.0 25 0 74870.0 -1 0 52 1142.4825278135954 3424.4257540409862 3 1143.152026355267 MULTI CID FTMS 0 0 0 15278 899458.0625 0.4944378643823433 1 -0.050811767578125 14 4 {[QN]|[E{I|L}]|[KN]}[KQ]{[DS]|[MA]|[CV]|TT}{I|L}E{I|L} 9 -1 13.134 0.0 0.0 0.38353 0.0 0.0 0.0 2365.8172084689736 2365.8172084689736 6.143981361436888 0.0 0.0 0.0 0 0.0 0.0 0.9124379954164592 1.16944517631652 {[QN]|[E{I|L}]|[KN]}[KQ]{[DS]|[MA]|[CV]|TT}{I|L}E{I|L} 0.38353 - 83 1 1.179 89571.1 1.0 10380 4910 15278 HBL1_DMSO_200M_050219_2,15292 HBL1_DMSO_200M_050219_2,15292, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15293 80.47 129.0 96339.0 25 0 18401.0 + -1 WLNRSRRPVK 10 30 677.3946198570956 1352.774686780991 2 677.3956786990166 MULTI CID FTMS 0 0 0 15278 730128.9375 0.6345151916196214 -4 0.4410400390625 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))WLNRSRRPVK_ REV__ENST00000366669.8_1_1:230820977-230822738:+|nuORF 0.3506318815782774 0.7250146139312247 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.179 20341.8 1.0 10381 4910 15278 HBL1_DMSO_200M_050219_2,15293 HBL1_DMSO_200M_050219_2,15293,WLNRSRRPVK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15294 80.471 66.0 467900.0 25 0 47032.0 + 9894 FPFVSKTL 8 61 469.7709649175037 937.5273769018074 2 469.7710449099541 MULTI CID FTMS 0 0 0 15278 640811.625 0.9185451042724364 -2 0.2590789794921875 16 Unmodified _FPFVSKTL_ ENSG00000021826|ENST00000233072|CPS1;ENSG00000084774|ENST00000264705|CAD;nc|ENSG00000021826|P31327-2|CPS1;nc|ENSG00000021826|P31327-3|CPS1 34.40172386719151 0.3279500639400574 4 {M(Oxidation (M))|F}P{M(Oxidation (M))|F}VSKT{I|L} 8 0 + 41.293 0.0 0.0 4.4045 4.4045 84.095 0.0 0.0 0.0 29.51065591849323 8.118067221700933 8.118067221700933 41.29339253606229 0 0.4247425010840047 0.0 0.2614393726401688 0.0 + + {M(Oxidation (M))|F}P{M(Oxidation (M))|F}VSKT{I|L} 4.4045 + + 27 + 1 1.179 31277.6 1.0 10382 4910 15278 HBL1_DMSO_200M_050219_2,15294 HBL1_DMSO_200M_050219_2,15294,FPFVSKTL False True FPFVSKTL 80.471086 469.771044909954 8268267.0 15278.0 ENSG00000084774|ENST00000264705|CAD;;ENSG00000021826|ENST00000233072|CPS1;;nc|ENSG00000021826|P31327-3|CPS1;;nc|ENSG00000021826|P31327-2|CPS1 5.134614785512288 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15295 80.473 112.0 1087400.0 25 0 135830.0 + 15225 IPFPVEKI 8 99 471.7863035343824 941.5580541355648 2 471.7865783572197 MULTI CID FTMS 0 0 0 15278 622113.75 0.4797089192773219 -2 0.2590789794921875 17 Unmodified _IPFPVEKI_ ENSG00000116044|ENST00000397062|NFE2L2;nc|ENSG00000116044|Q16236-2|NFE2L2;nc|ENSG00000116044|Q16236-3|NFE2L2 49.93300154707207 0.1395624531867191 4 {I|L}P{M(Oxidation (M))|F}PVEK{I|L} 8 0 + 69.805 0.0 0.0 7.4137 7.4137 89.036 0.0 0.0 0.0 48.33404095816413 7.098557027813541 7.098557027813541 8.552207222934385 0 0.6861818737241735 1.5228787452803376 0.7059771852360797 0.0 + + {I|L}P{M(Oxidation (M))|F}PVEK{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}[DP]K{I|L};{I|L}P{M(Oxidation (M))|F}PV[SG]{I|L}{I|L};{I|L}{I|L}MPVEK{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}T[VG]PV;{I|L}{I|L}M{I|L}[DP]K{I|L};{I|L}{I|L}MPV[SG]{I|L}{I|L};{I|L}{I|L}M{I|L}T[VG]PV 7.4137;6.5054;6.0664;5.0723;4.9891;4.164;3.7249;2.6476 +;-;-;-;-;-;-;- + 375 + 1 1.179 95230.7 1.0 10383 4910 15278 HBL1_DMSO_200M_050219_2,15295 HBL1_DMSO_200M_050219_2,15295,IPFPVEKI False True IPFPVEKI 80.473428 471.7873 8986101.0 15278.0 nc|ENSG00000116044|Q16236-3|NFE2L2;;ENSG00000116044|ENST00000397062|NFE2L2;;nc|ENSG00000116044|Q16236-2|NFE2L2 5.839505195617676 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15296 80.477 191.0 473320.0 25 0 87955.0 + -1 TLLIMFLLI 9 98 546.8400888769715 1091.665624820743 2 546.8401367068291 MULTI CID FTMS 0 0 0 15278 423327.9375 0.4410068836365717 -2 0.2590789794921875 18 Oxidation (M) _TLLIM(Oxidation (M))FLLI_ REV__ENST00000437681.1_1_1:28835797-28835884:+|nuORF 4.75600775471527 0.7486543447549536 4 {M(Oxidation (M))|F} 1 -1 13.099 0.0 0.0 1.1999 0.0 0.0 926.5859109308976 0.0 926.5859109308976 0.0 1.839883926472972 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1999 + + 134 + 1 1.179 77185.6 1.0 10384 4910 15278 HBL1_DMSO_200M_050219_2,15296 HBL1_DMSO_200M_050219_2,15296,TLLIMFLLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15297 80.485 427.0 242410.0 25 0 32101.0 + 44888 YPPNPWREI 9 110 586.2980459371845 1170.581538941169 2 586.2989990115166 MULTI CID FTMS 0 0 0 15278 429495.375 0.5080854252218776 3 -0.2766265869140625 19 Unmodified _YPPNPWREI_ ENSG00000115825|ENST00000234179|PRKD3 47.594388314883695 0.0456443387682827 4 YPPN{I|L}SAW 8 5 82.772 0.0 0.0 7.071 0.0 0.0 0.0 239.10395227603752 239.10395227603752 55.657978556393815 0.0 0.0 0.0 0 0.805462187404089 2.0 0.4247425010840047 0.3494850021680094 YPPN{I|L}SAW 7.071 - 1232 + 1 1.179 85566.2 1.0 10385 4910 15278 HBL1_DMSO_200M_050219_2,15297 HBL1_DMSO_200M_050219_2,15297,YPPNPWREI True True YPPNPWREI 80.48472 586.298999011517 57190206.0 15278.0 ENSG00000115825|ENST00000234179|PRKD3 6.705630620320638 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15298 80.493 455.0 597430.0 25 0 82787.0 -1 0 110 700.4220855209239 699.4148090543239 1 700.4233276247978 MULTI CID FTMS 0 0 0 15278 416279.65625 0.6524448875180904 -1 0.169830322265625 20 4 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}Q{I|L} 6 -1 + 74.473 0.0 0.0 10.648 10.648 89.208 0.0 0.0 0.0 4.960762528683702 16.197887582883936 4.960762528683702 4.960762528683702 0 1.174742501084005 1.2218487496163564 1.3807196863200843 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}Q{I|L};[{I|L}V]D{I|L}Q{I|L};{I|L}DV{I|L}Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}VQ{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}VQ{I|L};[{I|L}V]D{I|L}[AG]{I|L};[{I|L}V]DQ{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}VAAV{I|L};[{I|L}V]EVQ{I|L} 10.648;9.9386;9.7714;9.301;8.826;8.3207;8.155;8.1168;7.7617;7.6115 -;-;-;-;-;-;-;-;-;- 774 1 1.179 196620.7 1.0 10386 4910 15278 HBL1_DMSO_200M_050219_2,15298 HBL1_DMSO_200M_050219_2,15298, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15300 80.497 7.8 8867700.0 25 0 1199200.0 + 14629 IIIPEIQKV 9 73 526.8390743453494 1051.6635957574988 2 526.8396484255791 MULTI CID FTMS 0 0 0 15299 6816152.0 0.9972435229446118 1 -0.0847091674804687 1 Unmodified _IIIPEIQKV_ ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;nc|ENSG00000124207|P55060-3|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L 34.40172386719151 0.1061884637610825 4 {I|L}{I|L}{I|L}PE{I|L}AG{[QV]|[N{I|L}]|[RA]|[KV]} 10 2 + 53.114 0.0 0.0 5.0505 5.0505 68.906 0.0 0.0 0.0 18.847555530356992 2.887955392469692 2.887955392469692 0.5115252244738144 0 0.8494850021680094 1.6989700043360187 0.3807196863200844 0.0 {I|L}{I|L}{I|L}PE{I|L}AG{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}{I|L}PE{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]} 5.0505;5.0019 -;+ + 302 + 1 1.179 57960.0 1.0 10387 4911 15299 HBL1_DMSO_200M_050219_2,15300 HBL1_DMSO_200M_050219_2,15300,IIIPEIQKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15301 80.498 21.0 2634500.0 25 0 631160.0 + 16888 KIFSGVFVKV 10 80 562.3470163080498 1122.6794796828997 2 562.3473998904228 MULTI CID FTMS 0 0 0 15299 2473402.5 0.1524641169708158 3 -0.3166275024414062 2 Unmodified _KIFSGVFVKV_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 46.0223103267499 0.103496714999793 4 K{I|L}{M(Oxidation (M))|F}S[VG]{M(Oxidation (M))|F}VVK 10 2 + 67.886 0.0 0.0 6.0468 6.0468 76.456 0.0 0.0 0.0 56.91708251878282 6.249387366082999 6.249387366082999 2.272437815030628 0 1.674742501084005 1.154901959985743 0.0 0.3494850021680094 K{I|L}{M(Oxidation (M))|F}S[VG]{M(Oxidation (M))|F}VVK;K{I|L}V[YQ]{M(Oxidation (M))|F}VVK 6.0468;5.8444 -;- 244 + 1 1.179 47827.6 1.0 10388 4911 15299 HBL1_DMSO_200M_050219_2,15301 HBL1_DMSO_200M_050219_2,15301,KIFSGVFVKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15302 80.499 38.0 1733400.0 25 0 187210.0 + 15376 IPNFDVREI 9 71 551.7984729563345 1101.582392979469 2 551.7981445193291 MULTI CID FTMS 0 0 0 15299 1822793.375 0.8794413081278659 1 -0.0847091674804687 3 Unmodified _IPNFDVREI_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 38.61474834105838 0.0830609365873449 4 {I|L}PN{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L} 9 0 + 83.65 0.0 0.0 7.5936 7.5936 90.991 0.0 0.0 0.0 45.163800089887545 1.706962271689747 1.706962271689747 9.208187539523747 0 1.2302046884880935 1.6989700043360187 0.0 0.8494850021680094 + + {I|L}PN{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L};{I|L}PGG{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L};{I|L}{I|L}[MN]DV{[RE]|[WV]}{I|L} 7.5936;6.7577;3.0726 +;-;- + 91 + 1 1.179 57540.4 1.0 10389 4911 15299 HBL1_DMSO_200M_050219_2,15302 HBL1_DMSO_200M_050219_2,15302,IPNFDVREI True True IPNFDVREI 80.499303 551.798144519329 39843572.0 15299.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 5.072002808252971 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15303 80.5 26.0 1860100.0 25 0 199690.0 + + 15326 LPPNHILEI 9 73 523.3030805482477 1044.5916081632954 2 523.3059570193291 MULTI CID FTMS 0 0 0 15299 1800160.875 0.9056379982812024 1 -0.0847091674804687 4 Unmodified _IPLMTKTEL_ ENSG00000105397|ENST00000525621|TYK2 27.628801355627647 0.1796483985696185 4 {I|L}{M(Oxidation (M))|F}{I|L}{I|L}P{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L} 9 -1 + 59.346 0.0 0.0 5.6813 5.6813 71.626 0.0 0.0 0.0 38.86168767277148 13.591731195183868 13.591731195183868 0.5115252244738144 0 0.7742275032520141 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}{I|L}{I|L}P{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L};[{I|L}P][HN]P{I|L}{I|L}E{I|L};[{I|L}P][HN]P{I|L}E{I|L}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}P{[C(Carbamidomethyl (C))G]|[NC]}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}{[QG]|[NA]}E{I|L};[{I|L}P][HN]{I|L}P{I|L}E{I|L};[{I|L}P][HN]{I|L}PE{I|L}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}P{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};[{I|L}P][HN]{I|L}EP{I|L}{I|L} 5.6813;5.6323;5.5859;5.3931;5.3931;5.3674;5.3441;5.2978;5.2234;5.0096 -;-;-;-;-;-;-;-;-;- 363 + 1 1.179 44573.6 1.0 10390 4911 15299 HBL1_DMSO_200M_050219_2,15303 HBL1_DMSO_200M_050219_2,15303,IPLMTKTEL False False LPPNHILEI 80.500482 523.305957019329 91223664.0 15299.0 ENSG00000105397|ENST00000525621|TYK2 4.7252858479817705 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15304 80.502 27.0 1581500.0 25 0 180610.0 + 25321 NAIDRLVNI 9 65 514.2981345142546 1026.581716095309 2 514.2985717654228 MULTI CID FTMS 0 0 0 15299 1565902.125 0.7274254925845925 1 -0.0847091674804687 5 Unmodified _NAIDRLVNI_ ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2 67.83816525789305 0.0219346420158844 4 NA{I|L}D 4 5 62.779 0.0 0.0 6.1154 0.0 0.0 0.0 610.3679293268186 610.3679293268186 30.582049329337977 0.0 0.0 0.0 0 1.079689690656103 2.0 0.3054621874040891 0.0 + NA{I|L}D 6.1154 + + 72 + 1 1.179 40105.6 1.0 10391 4911 15299 HBL1_DMSO_200M_050219_2,15304 HBL1_DMSO_200M_050219_2,15304,NAIDRLVNI True True NAIDRLVNI 80.501659 514.298571765423 19312926.0 15299.0 ENSG00000088930|ENST00000377191|XRN2;;nc|ENSG00000088930|Q9H0D6-2|XRN2 5.570720195770264 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15305 80.503 30.0 1179700.0 25 0 86442.0 + 4442 DAWKQLQTF 9 82 568.790140294791 1135.5657276563818 2 568.7898437380791 MULTI CID FTMS 0 0 0 15299 1422095.25 0.9392037561671364 1 -0.0847091674804687 6 Unmodified _DAWKQLQTF_ ENSG00000119673|ENST00000238651|ACOT2;ENSG00000184227|ENST00000311148|ACOT1;nc|ENSG00000119673|P49753-2|ACOT2 38.17557092003332 0.0854718145212029 4 {[DA]|[EG]}W[KQ]{I|L}QT{M(Oxidation (M))|F} 9 0 + 48.579 0.0 0.0 4.278 4.278 78.669 0.0 0.0 0.0 22.367574738500338 12.319845938712035 12.319845938712035 9.208187539523747 0 1.242992819099939 1.5228787452803376 0.3807196863200844 0.0 + + {[DA]|[EG]}W[KQ]{I|L}QT{M(Oxidation (M))|F};{[DA]|[EG]}W[KQ]{I|L}[AG]T{M(Oxidation (M))|F};[Q{I|L}]{[QG]|[NA]}VC{I|L}QT{M(Oxidation (M))|F};[NP][KS]VC{I|L}QT{M(Oxidation (M))|F} 4.278;3.4671;1.9233;1.753 +;-;-;- + 111 1 1.179 33124.1 1.0 10392 4911 15299 HBL1_DMSO_200M_050219_2,15305 HBL1_DMSO_200M_050219_2,15305,DAWKQLQTF True True DAWKQLQTF 80.502838 568.789843738079 13933098.0 15299.0 ENSG00000119673|ENST00000238651|ACOT2;;nc|ENSG00000119673|P49753-2|ACOT2;;ENSG00000184227|ENST00000311148|ACOT1 8.68625259399414 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15306 80.504 45.0 1541000.0 25 0 231140.0 + 4639 DAYVLPKL 8 76 459.7682070317223 917.5218611302446 2 459.7682678103447 MULTI CID FTMS 0 0 0 15299 1236249.25 0.0466971787823302 4 -0.3971099853515625 7 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 34.10243960390752 0.3329570729325616 4 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 + 62.159 0.0 0.0 6.7746 6.7746 90.633 0.0 0.0 0.0 48.69070971708595 11.08349385648225 11.08349385648225 12.122114391106004 0 0.805462187404089 1.6989700043360187 0.0 0.25 + + {[DA]|[EG]}YV{I|L}PK{I|L};{[DA]|[EG]}YV{I|L}{I|L}[KP] 6.7746;5.4534 +;- + 57 + 1 1.179 58326.8 1.0 10393 4911 15299 HBL1_DMSO_200M_050219_2,15306 HBL1_DMSO_200M_050219_2,15306,DAYVLPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15307 80.506 87.0 771300.0 25 0 134300.0 + -1 VCKSDQLV 8 55 474.745250521032 947.475948108864 2 474.7453796267509 MULTI CID FTMS 0 0 0 15299 813108.125 0.4901603818462528 -5 0.491851806640625 8 Carbamidomethyl (C) _VC(Carbamidomethyl (C))KSDQLV_ REV__ENSG00000159307|ENST00000360835|SCUBE1 18.13498045792455 0.6430038125133779 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L} 3 -1 25.062 0.0 0.0 2.6451 0.0 0.0 0.0 587.246461374742 587.246461374742 4.09256854528806 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L} 2.6451 - 30 1 1.179 55850.6 1.0 10394 4911 15299 HBL1_DMSO_200M_050219_2,15307 HBL1_DMSO_200M_050219_2,15307,VCKSDQLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15308 80.508 68.0 726750.0 25 0 81275.0 + 40144 VGLVDVPHP 9 85 466.7622856466979 931.5100183601958 2 466.7625915408134 MULTI CID FTMS 0 0 0 15299 606442.1875 0.3296677628326678 -3 0.3098907470703125 9 Unmodified _VGLVDVPHP_ REV__ENSG00000214756|ENST00000532971|CSKMT;REV__ENST00000398922.6_1_11:62433857-62434520:+|nuORF 16.942295170755138 0.3780752226737986 4 [VG]{I|L}V 4 -1 36.727 0.0 0.0 3.9427 0.0 0.0 0.0 560.2453096979124 560.2453096979124 24.252509456924827 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 [VG]{I|L}V 3.9427 + + 73 + 1 1.179 43791.0 1.0 10395 4911 15299 HBL1_DMSO_200M_050219_2,15308 HBL1_DMSO_200M_050219_2,15308,VGLVDVPHP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15309 80.509 73.0 661330.0 25 0 117340.0 1477 ALGADISMY 9 66 314.15345579277783 939.4385379785336 3 314.1533080935478 MULTI CID FTMS 0 0 0 15299 570049.9375 0.2890315237319726 3 -0.3166275024414062 10 Unmodified _ALGADISMY_ ENSG00000116761|ENST00000370938|CTH;nc|ENSG00000116761|P32929-2|CTH;nc|ENSG00000116761|P32929-3|CTH 12.531546534597751 0.4974689918368763 4 A{I|L}{I|L} 3 6 46.198 0.0 0.0 4.9176 0.0 0.0 0.0 639.2112872937039 639.2112872937039 35.74031267727719 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 A{I|L}{I|L} 4.9176 - 18 + 1 1.179 46137.2 1.0 10396 4911 15299 HBL1_DMSO_200M_050219_2,15309 HBL1_DMSO_200M_050219_2,15309,ALGADISMY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15310 80.513 220.0 599350.0 25 0 112360.0 + 14076 IAPKLLQI 8 119 448.3025589936575 894.590565054115 2 448.3025085330009 MULTI CID FTMS 0 0 0 15299 475276.875 1.0 0 0.0 11 Unmodified _IAPKLLQI_ ENSG00000172139|ENST00000305815|SLC9C1;nc|ENSG00000172139|Q4G0N8-2|SLC9C1 70.71552829651908 0.111000043122623 4 [{I|L}A]PK{I|L}{I|L}Q{I|L} 8 0 + 56.993 0.0 0.0 6.3709 6.3709 88.212 0.0 0.0 0.0 23.36034225422108 14.024174299985006 14.024174299985006 9.76403468139864 0 1.1549471895720984 2.0 0.0 1.055462187404089 + + [{I|L}A]PK{I|L}{I|L}Q{I|L};[{I|L}A]{I|L}[KP]{I|L}Q{I|L};[{I|L}A]PK{I|L}{I|L}[AG]{I|L};[{I|L}A]{I|L}[KP]{I|L}[AG]{I|L};[{I|L}A]PK{I|L}{I|L}AAV;[{I|L}A]{I|L}[KP]{I|L}AAV;[KP]{I|L}{I|L}[VP][KT];[KP]{I|L}[VP]{I|L}[KT] 6.3709;5.2794;4.6305;3.539;3.2947;2.2033;0.8523;0.12212 +;-;-;-;-;-;-;- + 263 + 1 1.179 104913.9 1.0 10397 4911 15299 HBL1_DMSO_200M_050219_2,15310 HBL1_DMSO_200M_050219_2,15310,IAPKLLQI True True IAPKILQL 80.513478 448.302508533001 3501442.25 15299.0 ENSG00000138670|ENST00000264400|RASGEF1B;;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B;;nc|ENSG00000138670|Q0VAM2-2|RASGEF1B 1.8018114566802976 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15311 80.517 185.0 657180.0 25 0 96404.0 28256 PQVTVDVL 8 100 435.74996689316646 869.4853808531329 2 435.7497436404228 MULTI CID FTMS 0 0 0 15299 489734.53125 0.2966676424649755 -2 0.22064208984375 12 Unmodified _PQVTVDVL_ ENSG00000187741|ENST00000389301|FANCA;nc|ENSG00000187741|O15360-2|FANCA;nc|ENSG00000187741|O15360-3|FANCA 28.486842064014134 0.4448922141344407 4 [QP]VS{I|L} 5 4 35.15 0.0 0.0 4.0427 0.0 0.0 0.0 342.1673015897142 342.1673015897142 13.839256468719157 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.0 0.0 [QP]VS{I|L} 4.0427 - 255 1 1.179 100993.1 1.0 10398 4911 15299 HBL1_DMSO_200M_050219_2,15311 HBL1_DMSO_200M_050219_2,15311,PQVTVDVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15312 80.52 152.0 693740.0 25 0 71406.0 -1 LLATMCLAL 9 117 503.2793035367612 1004.5440541403224 2 503.2771789431572 MULTI CID FTMS 0 0 0 15299 434297.71875 0.1948733714661348 5 -0.5057830810546875 13 Carbamidomethyl (C) _LLATMC(Carbamidomethyl (C))LAL_ ENST00000564991.1_16:18554982-18555033:-|nuORF 38.15118350030904 0.0856056900103839 4 [VS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]}M{I|L}A{I|L} 9 -1 + 62.809 0.0 0.0 6.2525 6.2525 77.423 0.0 0.0 0.0 2.4302458769819566 2.4302458769819566 2.4302458769819566 2.4302458769819566 0 1.7614393726401687 2.0 1.3133414502656051 0.0 [VS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]}M{I|L}A{I|L};[VS]VD{I|L}T{[MG]|[TS]}A{I|L};[VS]VD{I|L}TRC{I|L};[VS]V[WP]HPA{I|L};[VS][WY][PG]{I|L}A{I|L};[VS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}PA{I|L};[VS]V[{M(Oxidation (M))|F}V]{[SA]|[TG]}{I|L}A{I|L};[VS]VD{I|L}T[TA]S{I|L};[VS][WY]{[VA]|[{I|L}G]}PA{I|L};[VS]VD{I|L}[VS]SS{I|L} 6.2525;6.0106;5.8086;5.7492;5.6583;5.5739;5.4147;5.0261;4.9796;4.9472 -;-;-;-;-;-;-;-;-;- 2198 1 1.179 83255.5 1.0 10399 4911 15299 HBL1_DMSO_200M_050219_2,15312 HBL1_DMSO_200M_050219_2,15312,LLATMCLAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15313 80.529 528.0 503570.0 25 0 40736.0 + 13320 HLATALVI 8 189 419.2635291811209 836.5125054290419 2 419.2634155154228 MULTI CID FTMS 0 0 0 15299 384259.3125 1.0 0 0.0 14 Unmodified _HLATALVI_ REV__ENSG00000104728|ENST00000349830|ARHGEF10;REV__nc|ENSG00000104728|O15013-4|ARHGEF10;REV__nc|ENSG00000104728|O15013-6|ARHGEF10;REV__nc|ENSG00000104728|O15013-7|ARHGEF10;REV__nc|ENSG00000104728|O15013|ARHGEF10 40.44857923139169 0.2267865117615937 4 [H{I|L}]AT{I|L}AV{I|L} 8 -1 + 47.481 0.0 0.0 5.676 5.676 76.342 0.0 0.0 0.0 8.306421236032875 14.024174299985006 8.306421236032875 3.0102999566398125 0 0.7059771852360797 0.744727494896694 0.5629529932484498 0.0 [H{I|L}]AT{I|L}AV{I|L};[H{I|L}]A{I|L}TAV{I|L};[H{I|L}]{I|L}ATAV{I|L};[H{I|L}]ATA{I|L}V{I|L};[TA][H{I|L}]{I|L}AV{I|L};[{I|L}A]HT{I|L}AV{I|L};[H{I|L}]AT{I|L}G{I|L}{I|L};[H{I|L}]A{I|L}ATV{I|L};[{I|L}A]H{I|L}TAV{I|L};[H{I|L}]A{I|L}TG{I|L}{I|L} 5.676;5.3162;4.8952;4.7605;4.6831;4.4749;4.1785;4.1355;4.115;3.8187 -;-;-;+;-;-;-;-;-;- + 534 1 1.179 207870.3 1.0 10400 4911 15299 HBL1_DMSO_200M_050219_2,15313 HBL1_DMSO_200M_050219_2,15313,HLATALVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15314 80.537 453.0 382050.0 25 0 20886.0 + 30863 RIMEFTTTL 9 176 556.2932961852871 1110.572039437374 2 556.2943603396416 MULTI CID FTMS 0 0 0 15299 369558.1875 0.1135161077262579 7 -0.717376708984375 15 Unmodified _RIMEFTTTL_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 41.95555342248728 0.0647214845423414 4 {[TV]|[{I|L}S]}{[ET]|[MV]}V{M(Oxidation (M))|F}TTT{I|L} 10 3 + 66.107 0.0 0.0 5.9525 5.9525 79.317 0.0 0.0 0.0 4.855710995521072 10.511525224473814 4.855710995521072 4.03212513775344 0 0.8494850021680094 1.6989700043360187 1.424742501084005 0.0 {[TV]|[{I|L}S]}{[ET]|[MV]}V{M(Oxidation (M))|F}TTT{I|L};{[TV]|[{I|L}S]}PQ[HN]TTT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WV{M(Oxidation (M))|F}TTT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RE{M(Oxidation (M))|F}TTT{I|L};[{I|L}T]{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}TTT{I|L};[PS]{I|L}Q[HN]TTT{I|L};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}{M(Oxidation (M))|F}TTT{I|L};{[TV]|[{I|L}S]}P[AG][HN]TTT{I|L};[R{I|L}]ME{M(Oxidation (M))|F}TTT{I|L};{[TV]|[{I|L}S]}PE[H{I|L}]TAM{I|L} 5.9525;5.5895;5.5153;5.3567;5.2351;5.1121;5.0036;4.7643;4.7413;4.6938 -;-;-;-;-;-;-;-;+;- + 14044 1 1.179 136667.5 1.0 10401 4911 15299 HBL1_DMSO_200M_050219_2,15314 HBL1_DMSO_200M_050219_2,15314,RIMEFTTTL True True RIMEFTTTL 80.537376 556.294360339642 3020304.75 15299.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 5.994315147399902 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15315 80.547 554.0 389450.0 25 0 33107.0 -1 0 167 336.1044863105572 670.1944196879144 2 336.1047241091728 MULTI CID FTMS 0 0 0 15299 353543.84375 0.0540781565337125 4 -0.3971099853515625 16 4 {I|L} 1 -1 11.259 0.0 0.0 1.68 0.0 0.0 539.0993249386942 0.0 539.0993249386942 0.0 3.037275116073344 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.68 - 21 + 1 1.179 169738.0 1.0 10402 4911 15299 HBL1_DMSO_200M_050219_2,15315 HBL1_DMSO_200M_050219_2,15315, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15316 80.549 100.0 901320.0 25 0 58595.0 39069 TVVPWDHAL 9 119 519.273989191407 1036.533425449614 2 519.2747070193291 MULTI CID FTMS 0 0 0 15299 355350.875 0.973150285589192 1 -0.0847091674804687 17 Unmodified _TVVPWDHAL_ ENSG00000084774|ENST00000264705|CAD 28.486842064014134 0.1687311288560894 4 {[TV]|[{I|L}S]}N 3 7 28.997 0.0 0.0 2.7975 0.0 0.0 0.0 719.347609369789 719.347609369789 15.179629285959296 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.3054621874040891 0.0 {[TV]|[{I|L}S]}N 2.7975 - 372 1 1.179 73625.0 1.0 10403 4911 15299 HBL1_DMSO_200M_050219_2,15316 HBL1_DMSO_200M_050219_2,15316,TVVPWDHAL False True QPLPRIVTI 80.549261 519.274707019329 6609725.5 15299.0 nc|ENSG00000095397|Q9P202-4|WHRN;;nc|ENSG00000095397|Q9P202-3|WHRN;;ENSG00000095397|ENST00000362057|WHRN 2.783508022626241 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15317 80.558 508.0 326540.0 25 0 32754.0 -1 0 156 990.9276545751168 1979.8407562170337 2 991.4296142458916 MULTI CID FTMS 0 0 0 15299 344442.15625 0.7563768597101157 -1 0.050811767578125 18 4 [YQ]{I|L}ENC[NS]YDE{I|L}S{I|L} 14 -1 67.789 0.0 0.0 3.424 0.0 0.0 0.0 305.1095299809587 305.1095299809587 47.12470813278789 0.0 0.0 0.0 0 0.0 1.0 0.2887254899964357 2.56295299324845 [YQ]{I|L}ENC[NS]YDE{I|L}S{I|L} 3.424 - 23714 1 1.179 111571.8 1.0 10404 4911 15299 HBL1_DMSO_200M_050219_2,15317 HBL1_DMSO_200M_050219_2,15317, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15318 80.568 466.0 436600.0 25 0 26436.0 + 10577 FVIQEQNVAL 10 171 580.8194389534073 0 580.8185912966728 PEAK CID FTMS 0 0 0 15299 351614.40625 1.0 0 0.0 19 Unmodified _FVIQEQNVAL_ ENSG00000047315|ENST00000314595|POLR2B 49.55428908609986 0.051331770361836 4 {I|L}{M(Oxidation (M))|F}QED 5 8 28.889 0.0 0.0 2.4912 0.0 0.0 130.0614441832759 394.2591646783813 524.3206088616572 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 1.1989700043360187 {I|L}{M(Oxidation (M))|F}QED 2.4912 - 2200 + 1 1.179 155752.4 1.0 10405 4911 15299 HBL1_DMSO_200M_050219_2,15318 HBL1_DMSO_200M_050219_2,15318,FVIQEQNVAL True True FVIQEQNVAL 80.56769 580.818591296673 3324430.75 15299.0 ENSG00000047315|ENST00000314595|POLR2B 5.0918019612630205 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15319 80.578 560.0 703680.0 25 0 94631.0 + 31934 RVCNMRAV 8 147 316.83269723585227 947.4762623077568 3 316.8323852419853 MULTI CID FTMS 0 0 0 15299 324198.375 0.3417327237734038 -5 0.491851806640625 20 Unmodified _RVCNMRAV_ REV__ENST00000261681.8_1_14:67787030-67787075:+|nuORF 26.34127834903884 0.4900704351052977 4 GVVKV 5 -1 64.993 0.0 0.0 6.8596 0.0 0.0 0.0 462.1316989301228 462.1316989301228 40.83613437787733 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.6549471895720984 GVVKV 6.8596 - 350 + 1 1.179 314249.7 1.0 10406 4911 15299 HBL1_DMSO_200M_050219_2,15319 HBL1_DMSO_200M_050219_2,15319,RVCNMRAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15321 80.582 16.0 2142100.0 25 0 247300.0 23713 LTTRPSESKT 10 62 560.3015854213894 1118.5886179095787 2 560.3022338747978 MULTI CID FTMS 0 0 0 15320 2935913.0 0.0216773167270322 8 -0.8751602172851562 1 Unmodified _LTTRPSESKT_ ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1 8.745405648335112 0.6861838735306406 4 T{I|L}V 3 9 19.693 0.0 0.0 1.7605 0.0 0.0 334.1670613683662 468.1937960260376 802.3608573944038 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 T{I|L}V 1.7605 - 77 + 1 1.159 35701.6 1.0 10407 4912 15320 HBL1_DMSO_200M_050219_2,15321 HBL1_DMSO_200M_050219_2,15321,LTTRPSESKT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15322 80.583 19.0 2644500.0 25 0 854000.0 + 7132 EEMWLDQEYYY 11 61 784.8142184085751 1567.6138838839502 2 784.8151122927666 MULTI CID FTMS 0 0 0 15320 2578166.75 0.4340552669149387 2 -0.2319183349609375 2 Unmodified _EEMWLDQEYYY_ REV__ENSG00000138709|ENST00000326639|LARP1B;REV__nc|ENSG00000138709|Q659C4-2|LARP1B;REV__nc|ENSG00000138709|Q659C4-4|LARP1B;REV__nc|ENSG00000138709|Q659C4-9|LARP1B 12.240655878213236 0.7805268987462184 4 YYD[DG]Y{[VA]|[{I|L}G]}NYYY 12 -1 + 51.008 0.0 0.0 3.2539 3.2539 68.676 0.0 0.0 0.0 15.367253507107035 25.986446888048107 15.367253507107035 3.590219426416681 0 0.3807196863200844 2.0 0.7302046884880937 0.4247425010840047 YYD[DG]Y{[VA]|[{I|L}G]}NYYY;YYY[DG]D{[VA]|[{I|L}G]}NYYY;YYD[DG]Y{[{M(Oxidation (M))|F}H]|[RQ]}YYY;YYD[YG]D{[VA]|[{I|L}G]}NYYY;YYD[DG]{I|L}[NG]YYYY;YYD[DG]{[{M(Oxidation (M))|F}H]|[RQ]}YYYY;YYY[DG]D{[{M(Oxidation (M))|F}H]|[RQ]}YYY;YYD[DG]{I|L}[YG]NYYY;YYD[YG]D{[{M(Oxidation (M))|F}H]|[RQ]}YYY;YYD{[RE]|[WV]}[NG]YYYY 3.2539;3.0249;3.0241;2.8698;2.8389;2.8012;2.7951;2.6469;2.6401;2.4171 -;-;-;-;-;-;-;-;-;- 349 1 1.159 43037.7 1.0 10408 4912 15320 HBL1_DMSO_200M_050219_2,15322 HBL1_DMSO_200M_050219_2,15322,EEMWLDQEYYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15323 80.584 16.0 2525500.0 25 0 181900.0 + 16924 KILDLETQL 9 74 536.8164907783326 1071.6184286234652 2 536.8163329958916 MULTI CID FTMS 0 0 0 15320 2969023.5 0.8211702883912567 -1 0.0847091674804687 3 Unmodified _KILDLETQL_ ENSG00000136811|ENST00000351030|ODF2;ENST00000488909.1_1_9:131260677-131262531:+|nuORF;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2 43.77239144664712 0.0547478964384323 4 {[QN]|[E{I|L}]|[KN]}VK{I|L}ETQ{I|L} 9 3 + 70.143 0.0 0.0 6.5455 6.5455 79.747 0.0 0.0 0.0 10.642492736872596 57.8146933051946 10.642492736872596 3.0102999566398125 0 0.7742275032520141 0.0 0.7742275032520141 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}VK{I|L}ETQ{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}TEQ{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}ET[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}ETQ{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}TE[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}TEQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}ET[AG]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L}ETQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}TE[AG]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L}TEQ{I|L} 6.5455;6.2646;5.6863;5.5385;5.4053;5.2576;4.6792;4.6315;4.3983;4.3506 -;-;-;-;-;-;-;-;-;- 300 1 1.159 37082.3 1.0 10409 4912 15320 HBL1_DMSO_200M_050219_2,15323 HBL1_DMSO_200M_050219_2,15323,KILDLETQL True True KILDLETQL 80.584025 536.816332995892 61250620.0 15320.0 ENST00000488909.1_1_9:131260677-131262531:+|nuORF;;nc|ENSG00000136811|Q5BJF6-4|ODF2;;nc|ENSG00000136811|Q5BJF6|ODF2;;ENSG00000136811|ENST00000351030|ODF2;;nc|ENSG00000136811|Q5BJF6-3|ODF2;;nc|ENSG00000136811|Q5BJF6-2|ODF2 4.571588118871053 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15324 80.587 171.0 518920.0 25 0 34611.0 + 26199 NQFVQPASVGV 11 122 573.3003879927538 1144.5862230523076 2 573.3020507693291 MULTI CID FTMS 0 0 0 15320 590900.5 0.0333812141599951 4 -0.4210739135742187 4 Unmodified _NQFVQPASVGV_ REV__ENST00000298295.3_1_10:45472209-45472434:-|nuORF 26.268140514670165 0.4754186812857754 4 [H{I|L}]S{M(Oxidation (M))|F}{I|L}TW{[QN]|[E{I|L}]|[KN]} 9 -1 + 44.732 0.0 0.0 3.9081 3.9081 70.513 0.0 0.0 0.0 6.17046012758685 2.7679208521255205 2.7679208521255205 3.581755287328121 0 0.0 0.8538719643217619 0.6861818737241735 0.0 [H{I|L}]S{M(Oxidation (M))|F}{I|L}TW{[QN]|[E{I|L}]|[KN]};[H{I|L}]SV[YR]{M(Oxidation (M))|F}SH;[H{I|L}]S{I|L}{M(Oxidation (M))|F}TW{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}H{I|L}TSV;[H{I|L}]TV{M(Oxidation (M))|F}TW{[QN]|[E{I|L}]|[KN]};[H{I|L}]S{I|L}T{M(Oxidation (M))|F}W{[QN]|[E{I|L}]|[KN]};[H{I|L}]{I|L}S{M(Oxidation (M))|F}TW{[QN]|[E{I|L}]|[KN]};[VS][RN]{I|L}W{M(Oxidation (M))|F}SH;[H{I|L}]S{I|L}TSV{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[H{I|L}]SV[YR]E{[QN]|[E{I|L}]|[KN]} 3.9081;3.5952;3.4913;3.2914;2.8806;2.8533;2.7023;2.6554;2.4305;2.3084 -;-;-;-;-;-;-;-;-;- 1177 1 1.159 70684.4 1.0 10410 4912 15320 HBL1_DMSO_200M_050219_2,15324 HBL1_DMSO_200M_050219_2,15324,NQFVQPASVGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15325 80.59 134.0 882720.0 25 0 52556.0 + 27974 NVPEIMPKL 9 127 520.3138957231034 1038.6132385130068 2 520.3148071169853 MULTI CID FTMS 0 0 0 15320 493657.65625 0.6129648228960819 -1 0.0847091674804687 5 Unmodified _PLVTPMVALV_ nc|ENSG00000103540|O43303|CCP110;ENSG00000103540|ENST00000694978|CCP110 32.30548876998284 0.2428506522065767 4 {I|L}PPE{I|L}{I|L}MKV 9 8 + 64.062 0.0 0.0 6.1681 6.1681 84.47 0.0 0.0 0.0 15.117588851995038 8.09096632454478 8.09096632454478 8.09096632454478 0 1.086696871556164 1.6989700043360187 0.0 0.1694451763165201 {I|L}PPE{I|L}{I|L}MKV;{I|L}PVE{I|L}MPK{I|L};{I|L}PVE{I|L}MKP{I|L};{I|L}PV[DV][RN]KV;{I|L}PPE{I|L}MVK{I|L};{I|L}VPE{I|L}MPK{I|L};{I|L}P{[{M(Oxidation (M))|F}D]|MM}[{I|L}P]PK{I|L};{I|L}VPE{I|L}MKP{I|L};{I|L}P{[{M(Oxidation (M))|F}D]|MM}[{I|L}P]KP{I|L};{I|L}PV[DV]QQK{I|L} 6.1681;5.3891;5.1187;4.1528;4.0388;3.4333;3.2001;3.1629;2.9297;2.8936 -;-;-;-;-;-;-;-;-;- 1209 + 1 1.159 96844.2 1.0 10411 4912 15320 HBL1_DMSO_200M_050219_2,15325 HBL1_DMSO_200M_050219_2,15325,PLVTPMVALV False False NVPEIMPKL 80.590106 520.314807116985 2997659.75 15320.0 nc|ENSG00000103540|O43303|CCP110;;ENSG00000103540|ENST00000694978|CCP110 5.867841084798177 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15326 80.593 142.0 381510.0 25 0 80551.0 + 41879 VPYSTSASLYI 11 83 600.810906164455 1199.60725939571 2 600.8121215701103 MULTI CID FTMS 0 0 0 15320 415528.59375 0.5371556800789067 -1 0.0847091674804687 6 Unmodified _VPYSTSASLYI_ ENSG00000060982|ENST00000261192|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;nc|ENSG00000060982|P54687-5|BCAT1 22.774965066869 0.5574395181959457 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{[MG]|[TS]}VAS{I|L}Y{I|L} 11 2 + 45.9 0.0 0.0 3.8263 3.8263 64.421 0.0 0.0 0.0 12.166766145451469 22.104645174219293 12.166766145451469 0.5551732784983017 0 0.7742275032520141 1.5228787452803376 1.7302046884880935 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{[MG]|[TS]}VAS{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{[WT]|[RM]}AS{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{[MG]|[TS]}VATVY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{[WT]|[RM]}ATVY{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[MG]|[TS]}VAS{I|L}Y{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[WT]|[RM]}AS{I|L}Y{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[MG]|[TS]}VATVY{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[WT]|[RM]}ATVY{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}{[SA]|[TG]}SV{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RN]{I|L}Y{I|L} 3.8263;3.78;3.3992;3.3529;2.5568;2.5105;2.1297;2.0834;2.0704;1.9948 -;-;-;-;-;-;-;-;-;- 322 1 1.159 43006.1 1.0 10412 4912 15320 HBL1_DMSO_200M_050219_2,15326 HBL1_DMSO_200M_050219_2,15326,VPYSTSASLYI False True VPYSTSASLYI 80.592973 600.81212157011 17881498.0 15320.0 nc|ENSG00000060982|P54687-2|BCAT1;;nc|ENSG00000060982|P54687-4|BCAT1;;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;;nc|ENSG00000060982|P54687-5|BCAT1;;nc|ENSG00000060982|P54687-3|BCAT1;;ENSG00000060982|ENST00000261192|BCAT1 4.423773368199666 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15327 80.6 408.0 568390.0 25 0 41313.0 + 30833 RIKDEFQLL 9 172 581.335105009456 1160.655657085712 2 581.3380004763603 MULTI CID FTMS 0 0 0 15320 424222.625 0.4332038063124701 -1 0.0847091674804687 7 Unmodified _RIKDEFQLL_ ENSG00000104964|ENST00000327141|TLE5;ENST00000585782.1_1_19:3057505-3062198:-|nuORF;ENST00000586003.1_1_19:3061156-3062198:-|nuORF;nc|ENSG00000104964|Q08117-2|TLE5 60.07390631473393 0.0260411565414776 4 [R{I|L}]KDE{M(Oxidation (M))|F}Q{I|L}{I|L} 9 0 + 77.362 0.0 0.0 6.6653 6.6653 79.148 0.0 0.0 0.0 15.642492736872596 47.844858742902616 15.642492736872596 2.5134875797167666 0 0.8807196863200843 1.0 0.6989700043360187 0.7742275032520141 + + [R{I|L}]KDE{M(Oxidation (M))|F}Q{I|L}{I|L};[R{I|L}]KDEQ{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}[AG]{I|L}{I|L};[R{I|L}]KDE[AG]{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{I|L}{M(Oxidation (M))|F}Q{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}]{I|L}{[SA]|[TG]}E{M(Oxidation (M))|F}Q{I|L}{I|L};[R{I|L}]KDE{I|L}{M(Oxidation (M))|F}[AG]{I|L};[Q{I|L}]{I|L}{[SA]|[TG]}EQ{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}{I|L}[AG]{I|L} 6.6653;6.4488;5.872;5.6554;5.4147;5.3499;4.7888;4.6214;4.5722;4.5565 +;-;-;-;-;-;-;-;-;- + 4635 1 1.159 172468.1 1.0 10413 4912 15320 HBL1_DMSO_200M_050219_2,15327 HBL1_DMSO_200M_050219_2,15327,RIKDEFQLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15328 80.608 445.0 484740.0 25 0 26876.0 + -1 HLLPEEQVYL 10 150 620.6406626931131 1858.9001586795391 3 620.9759399294853 MULTI CID FTMS 0 0 0 15320 343919.46875 0.8188875611258769 -2 0.1355209350585937 8 nc|ENSG00000104517|O95071-2|UBR5;ENSG00000104517|ENST00000520539|UBR5 4 [PS]{M(Oxidation (M))|F}AS[KT]QV{[QN]|[E{I|L}]|[KN]}HP{M(Oxidation (M))|F} 14 -1 69.334 0.0 0.0 3.7298 0.0 0.0 0.0 287.09605319586075 287.09605319586075 33.9942437579424 0.0 0.0 0.0 0 0.3494850021680094 0.8239087409443188 1.909097005026964 0.3807196863200844 [PS]{M(Oxidation (M))|F}AS[KT]QV{[QN]|[E{I|L}]|[KN]}HP{M(Oxidation (M))|F} 3.7298 - 12139 1 1.159 161361.8 1.0 10414 4912 15320 HBL1_DMSO_200M_050219_2,15328 HBL1_DMSO_200M_050219_2,15328, False False HLLPEEQVYL 80.60819 620.6419 1471642.0 15320.0 nc|ENSG00000104517|O95071-2|UBR5;;ENSG00000104517|ENST00000520539|UBR5 4.473149458567302 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15329 80.617 495.0 534500.0 25 0 28679.0 + -1 PNSLKEEM 8 166 482.2280429004821 962.4415328677642 2 482.7311584353447 MULTI CID FTMS 0 0 0 15320 317099.5 0.7785810684467539 -3 0.3053512573242187 9 Oxidation (M) _PNSLKEEM(Oxidation (M))_ REV__ENSG00000169762|ENST00000405303|TAPT1;REV__nc|ENSG00000169762|Q6NXT6-2|TAPT1 11.640296217721598 0.738950129755968 4 [SG]AGA{I|L} 6 -1 20.01 0.0 0.0 2.0791 0.0 0.0 0.0 503.1735346702556 503.1735346702556 4.459804765282945 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [SG]AGA{I|L} 2.0791 - 2049 + 1 1.159 197874.8 1.0 10415 4912 15320 HBL1_DMSO_200M_050219_2,15329 HBL1_DMSO_200M_050219_2,15329,PNSLKEEM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15330 80.627 566.0 410910.0 25 0 59052.0 + 30835 RIKDEFQLL 9 164 387.8923175189319 1160.6551231569958 3 387.8926269412041 MULTI CID FTMS 0 0 0 15320 297972.25 0.7266576268014096 -1 0.0847091674804687 10 Unmodified _RIKDEFQLL_ ENSG00000104964|ENST00000327141|TLE5;ENST00000585782.1_1_19:3057505-3062198:-|nuORF;ENST00000586003.1_1_19:3061156-3062198:-|nuORF;nc|ENSG00000104964|Q08117-2|TLE5 47.74868867922204 0.0453060283459952 4 [R{I|L}]KDEQ{M(Oxidation (M))|F}{I|L}{I|L} 9 2 + 57.404 0.0 0.0 4.9459 4.9459 68.751 0.0 0.0 0.0 18.017521919857806 38.36319773215088 18.017521919857806 0.6690156004425774 0 0.5994850021680094 1.154901959985743 0.805462187404089 0.8494850021680094 [R{I|L}]KDEQ{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}Q{I|L}{I|L};[R{I|L}]KDQE{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE[AG]{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}[AG]{I|L}{I|L};[R{I|L}]KD[AG]E{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}{I|L}[Q{I|L}];[R{I|L}]KDE{I|L}{M(Oxidation (M))|F}[Q{I|L}];[R{I|L}]WWQ{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]WW{M(Oxidation (M))|F}Q{I|L}{I|L} 4.9459;4.8882;4.5348;4.1525;4.0948;3.7414;3.2925;3.159;2.7487;2.7289 -;+;-;-;-;-;-;-;-;- + 1767 1 1.159 180104.8 1.0 10416 4912 15320 HBL1_DMSO_200M_050219_2,15330 HBL1_DMSO_200M_050219_2,15330,RIKDEFQLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15331 80.636 499.0 396230.0 25 0 30468.0 + 21938 LPPKVSVFV 9 190 493.307797826732 0 493.3082763552666 PEAK CID FTMS 0 0 0 15320 291071.59375 0.4946280841200456 7 -0.78497314453125 11 Unmodified _LPPKVSVFV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 30.63653989081413 0.1077493867305487 4 {I|L}PV[QT]P 6 6 23.193 0.0 0.0 2.3555 0.0 0.0 264.147195364761 82.06708704166249 346.2142824064235 0.0 0.0 0.0 0.0 0 0.5 0.0 0.555462187404089 0.3252574989159953 {I|L}PV[QT]P 2.3555 - 1666 + 1 1.159 147642.4 1.0 10417 4912 15320 HBL1_DMSO_200M_050219_2,15331 HBL1_DMSO_200M_050219_2,15331,LPPKVSVFV True False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 15332 80.644 490.0 163670.0 25 0 8687.3 -1 MPCAQRSWLAN 11 116 667.8003990427211 1333.586245152242 2 667.8022338747978 MULTI CID FTMS 0 0 0 15320 275585.125 1.0 0 0.0 12 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))PCAQRSWLAN_ ENSG00000151388|ENST00000504830|ADAMTS12;nc|ENSG00000151388|P58397-2|ADAMTS12;nc|ENSG00000151388|P58397-3|ADAMTS12 15.248480904072842 0.7179608125786238 4 {NN|[MP]|[D{I|L}]|[EV]}NSMD[DN]{I|L}{I|L}{[QG]|[NA]} 12 -1 + 50.522 0.0 0.0 3.7884 3.7884 63.501 0.0 0.0 0.0 0.2260494703924465 7.447274948966935 0.2260494703924465 0.2260494703924465 0 0.7742275032520141 1.0969100130080565 1.2302046884880935 0.0 {NN|[MP]|[D{I|L}]|[EV]}NSMD[DN]{I|L}{I|L}{[QG]|[NA]};{[DA]|[EG]}VGSMD[DN]{I|L}{I|L}{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}GGSMD[DN]{I|L}{I|L}{[QG]|[NA]};{[DA]|[EG]}KDMD[DN]{I|L}{I|L}{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}NDT[WC(Carbamidomethyl (C))]{I|L}{I|L}{[QG]|[NA]};{[DA]|[EG]}VGDT[WC(Carbamidomethyl (C))]{I|L}{I|L}{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}GGDT[WC(Carbamidomethyl (C))]{I|L}{I|L}{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}ND{[MS]|[{M(Oxidation (M))|F}A]}[DN]{I|L}{I|L}{[QG]|[NA]};{[DA]|[EG]}VGD{[MS]|[{M(Oxidation (M))|F}A]}[DN]{I|L}{I|L}{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}GGD{[MS]|[{M(Oxidation (M))|F}A]}[DN]{I|L}{I|L}{[QG]|[NA]} 3.7884;3.7715;3.7624;3.6312;3.594;3.5748;3.5657;3.493;3.476;3.4669 -;-;-;-;-;-;-;-;-;- 1527 1 1.159 67210.2 1.0 10418 4912 15320 HBL1_DMSO_200M_050219_2,15332 HBL1_DMSO_200M_050219_2,15332,MPCAQRSWLAN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15333 80.654 499.0 176820.0 25 0 20673.0 + 14570 IHRVTKEKEIS 11 109 670.3878913302068 1338.7612297272135 2 670.3881103396416 MULTI CID FTMS 0 0 0 15320 270277.5625 0.7246871753673046 -1 0.0847091674804687 13 Unmodified _IHRVTKEKEIS_ REV__ENSG00000188991|ENST00000344941|SLC15A5 3.2813086475875832 0.8596665074481906 4 {I|L} 1 -1 10.379 0.0 0.0 0.77524 0.0 0.0 1207.666104460415 0.0 1207.666104460415 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.77524 + + 219 + 1 1.159 72918.8 1.0 10419 4912 15320 HBL1_DMSO_200M_050219_2,15333 HBL1_DMSO_200M_050219_2,15333,IHRVTKEKEIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15334 80.664 527.0 257750.0 25 0 21643.0 -1 GVLCVEITM 9 178 511.2545127153543 1020.4944724975086 2 511.2543212771416 MULTI CID FTMS 0 0 0 15320 228335.5625 0.0478931677812032 7 -0.78497314453125 14 Carbamidomethyl (C) _GVLC(Carbamidomethyl (C))VEITM_ ENSG00000160218|ENST00000291574|TRAPPC10 23.1484247019978 0.2366544122328345 4 [QA]P{I|L}T{M(Oxidation (M))|F}{I|L}TM 9 -1 + 28.175 0.0 0.0 2.7609 2.7609 65.735 0.0 0.0 0.0 6.668602762971801 6.668602762971801 6.668602762971801 2.7422750325201406 0 0.9177353201839438 0.0 0.0 0.5387254899964358 [QA]P{I|L}T{M(Oxidation (M))|F}{I|L}TM;[QA]PDV{M(Oxidation (M))|F}{I|L}TM;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANV{M(Oxidation (M))|F}D[{I|L}V];[QA]{[ET]|[MV]}V{M(Oxidation (M))|F}D[{I|L}V];[VS]{[QD]|[EN]|[WG]|[KD]|[RS]}V{M(Oxidation (M))|F}D[{I|L}V];AAGP{I|L}T{M(Oxidation (M))|F}{I|L}TM;[VG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}V{M(Oxidation (M))|F}D[{I|L}V];AAGPDV{M(Oxidation (M))|F}{I|L}TM;[{I|L}T][WQ]{M(Oxidation (M))|F}D[{I|L}V];[DV][WK]{M(Oxidation (M))|F}D[{I|L}V] 2.7609;2.4922;2.1075;1.8599;1.6183;1.5775;1.5623;1.5537;1.5086;1.5013 -;-;-;-;-;-;-;-;-;- 1395 1 1.159 107175.9 1.0 10420 4912 15320 HBL1_DMSO_200M_050219_2,15334 HBL1_DMSO_200M_050219_2,15334,GVLCVEITM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15335 80.672 503.0 248910.0 25 0 30741.0 17446 KNPWKLVQLSP 11 154 655.3824352675513 1308.7503176019025 2 655.3817016482353 MULTI CID FTMS 0 0 0 15320 223847.75 0.1443554113025909 11 -1.1809005737304688 15 Unmodified _KNPWKLVQLSP_ ENST00000438666.6_1_13:36888408-36888525:-|nuORF 5.296884461304476 0.8501568894076437 4 [QP]VS{I|L}SS{[QS]|[NT]}{I|L} 10 8 45.081 0.0 0.0 3.4446 0.0 0.0 0.0 279.17543064971045 279.17543064971045 35.3269753772188 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.7742275032520141 0.2614393726401688 [QP]VS{I|L}SS{[QS]|[NT]}{I|L} 3.4446 - 724 1 1.159 101703.3 1.0 10421 4912 15320 HBL1_DMSO_200M_050219_2,15335 HBL1_DMSO_200M_050219_2,15335,KNPWKLVQLSP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15336 80.682 527.0 416000.0 25 0 21105.0 -1 0 151 1035.1632226589072 3102.467838576922 3 1035.494433581829 MULTI CID FTMS 0 0 0 15320 210738.15625 0.2533097774054212 -3 0.3053512573242187 16 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YASA{M(Oxidation (M))|F}S[WP]AT 12 -1 59.853 0.0 0.0 1.9292 0.0 0.0 0.0 1757.8033848017842 1757.8033848017842 22.445429725895508 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.7614393726401687 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YASA{M(Oxidation (M))|F}S[WP]AT 1.9292 - 37311 1 1.159 147020.6 1.0 10422 4912 15320 HBL1_DMSO_200M_050219_2,15336 HBL1_DMSO_200M_050219_2,15336, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15337 80.692 537.0 114260.0 25 0 4484.2 + 4523 DAYLQSLAKKI 11 127 625.3604614138603 0 625.3604614138603 PEAK CID FTMS 0 0 0 -1 0 17 Unmodified _DAYLQSLAKKI_ ENSG00000148296|ENST00000372022|SURF6 17.44264345198275 0.3815305483796679 4 DSVH 4 9 23.532 0.0 0.0 1.8845 0.0 0.0 722.4661488025268 85.03036676578358 807.4965155683104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 DSVH 1.8845 - 196 + 1 1.159 51159.8 1.0 10423 4912 15320 HBL1_DMSO_200M_050219_2,15337 HBL1_DMSO_200M_050219_2,15337,DAYLQSLAKKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15338 80.696 189.0 626020.0 25 0 121100.0 + 6530 EALELLPV 8 121 442.261892099583 0 442.2628661990166 PEAK CID FTMS 0 0 0 15320 211210.171875 1.0 0 0.0 18 Unmodified _EALELLPV_ REV__ENSG00000139350|ENST00000266742|NEDD1;REV__nc|ENSG00000139350|Q8NHV4-3|NEDD1 14.581692164780916 0.4900557725783909 4 {I|L}{I|L}PAA 5 -1 8.8829 0.0 0.0 1.0066 0.0 0.0 332.1218544122535 82.0670641534789 414.1889185657324 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}PAA 1.0066 - 150 + 1 1.159 99324.7 1.0 10424 4912 15320 HBL1_DMSO_200M_050219_2,15338 HBL1_DMSO_200M_050219_2,15338,EALELLPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15339 80.706 558.0 165260.0 25 0 23936.0 -1 NFIFCIHFATI 11 112 691.8536270273174 0 691.8531982302666 PEAK CID FTMS 0 0 0 15320 149545.203125 1.0 0 0.0 19 Carbamidomethyl (C) _NFIFC(Carbamidomethyl (C))IHFATI_ ENST00000461788.1_1_2:32740825-32744123:+|nuORF 13.042465956692816 0.4221659143281722 4 VT{I|L}MGS 6 -1 26.503 0.0 0.0 1.9182 0.0 0.0 597.2751900762336 193.0986269586547 790.3738170348882 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 VT{I|L}MGS 1.9182 - 393 + 1 1.159 71161.6 1.0 10425 4912 15320 HBL1_DMSO_200M_050219_2,15339 HBL1_DMSO_200M_050219_2,15339,NFIFCIHFATI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15340 80.719 740.0 149600.0 25 0 12562.0 + 22607 LPYIDGFRHI 10 122 410.8923452128908 1229.6552062388723 3 410.8929321169853 MULTI CID FTMS 0 0 0 15320 133037.625 1.0 0 0.0 20 Unmodified _LPYIDGFRHI_ ENSG00000114388|ENST00000232501|NPRL2;ENST00000429366.5_1_3:50385517-50386910:-|nuORF;ENST00000461020.5_1_3:50386114-50386910:-|nuORF;ENST00000467294.1_1_3:50386114-50386411:-|nuORF;ENST00000487632.5_1_3:50385039-50386411:-|nuORF;ENST00000493465.5_1_3:50385212-50386210:-|nuORF;nc|ENSG00000114388|Q8WTW4-2|NPRL2 51.629811660486645 0.0705852162080619 4 {I|L}PY{I|L}D{I|L} 6 4 65.5 0.0 0.0 5.3267 0.0 0.0 0.0 512.2392672174436 512.2392672174436 51.52015511993247 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.7742275032520141 0.0 {I|L}PY{I|L}D{I|L} 5.3267 - 454 + 1 1.159 88762.9 1.0 10426 4912 15320 HBL1_DMSO_200M_050219_2,15340 HBL1_DMSO_200M_050219_2,15340,LPYIDGFRHI True True LPYIDGFRHI 80.718656 410.892932116985 1740882.125 15320.0 ENST00000493465.5_1_3:50385212-50386210:-|nuORF;;ENST00000461020.5_1_3:50386114-50386910:-|nuORF;;ENSG00000114388|ENST00000232501|NPRL2;;ENST00000429366.5_1_3:50385517-50386910:-|nuORF;;ENST00000487632.5_1_3:50385039-50386411:-|nuORF;;nc|ENSG00000114388|Q8WTW4-2|NPRL2;;ENST00000467294.1_1_3:50386114-50386411:-|nuORF 4.100166241327922 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15342 80.723 1.8 27050000.0 25 0 3776700.0 + 12687 GVLPNIQAV 9 73 455.771210605697 909.527868278194 2 455.7715637087822 MULTI CID FTMS 0 0 0 15341 31613178.0 1.0 0 0.0 1 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 46.92087301778293 0.0471210510596396 4 [NP]{I|L}QA 5 4 35.326 0.0 0.0 3.884 0.0 0.0 0.0 383.22773335071287 383.22773335071287 10.91647915104165 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.4247425010840047 + [NP]{I|L}QA 3.884 + + 249 1 1.136 45394.8 1.0 10427 4913 15341 HBL1_DMSO_200M_050219_2,15342 HBL1_DMSO_200M_050219_2,15342,GVLPNIQAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15343 80.724 7.6 4312200.0 25 0 492170.0 + 37311 TIRYPDPLI 9 57 544.3110889334554 1086.607624933711 2 544.3115112185478 MULTI CID FTMS 0 0 0 15341 4896612.0 0.3156614456454253 4 -0.4028167724609375 2 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 31.26834338654808 0.1333407332142048 4 [{I|L}T][WM][{I|L}T]P{I|L}{I|L} 9 4 + 47.782 0.0 0.0 4.3973 4.3973 82.789 0.0 0.0 0.0 13.969319389390831 30.809203315863805 13.969319389390831 20.5676571578941 0 1.1861818737241734 1.6989700043360187 0.4247425010840047 0.0 [{I|L}T][WM][{I|L}T]P{I|L}{I|L};[DP][YR][{I|L}T]P{I|L}{I|L} 4.3973;2.5045 -;- 50 1 1.136 33634.3 1.0 10428 4913 15341 HBL1_DMSO_200M_050219_2,15343 HBL1_DMSO_200M_050219_2,15343,TIRYPDPLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15344 80.725 4.4 11303000.0 25 0 1647100.0 18703 LAIWEASL 8 72 451.75274496202985 901.4909369908596 2 451.7530090212822 MULTI CID FTMS 0 0 0 15341 12183276.0 0.9380826357931054 -2 0.2258148193359375 3 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 49.66892048692302 0.1408045912742846 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 5 + 60.824 0.0 0.0 6.7471 6.7471 80.501 0.0 0.0 0.0 11.505149978319906 8.384767769392738 8.384767769392738 3.0102999566398125 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}PA{I|L}SA{I|L};[{I|L}A]{M(Oxidation (M))|F}AP{I|L}SA{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[TV]|[{I|L}S]}MPA{I|L}SA{I|L};[{I|L}A]{I|L}CAD{I|L}A{I|L};{[TV]|[{I|L}S]}MAP{I|L}SA{I|L} 6.7471;6.4132;5.8585;5.5246;5.4709;5.1369;4.6164;4.5823;4.5807;4.2484 -;-;-;-;-;-;-;-;-;- 156 1 1.136 43910.8 1.0 10429 4913 15341 HBL1_DMSO_200M_050219_2,15344 HBL1_DMSO_200M_050219_2,15344,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15345 80.726 4.1 11550000.0 25 0 960590.0 + 34565 SPFPDIPKV 9 70 500.2790378955102 998.5435228578204 2 500.2791931033134 MULTI CID FTMS 0 0 0 15341 10879039.0 1.0 0 0.0 4 Unmodified _SPFPDIPKV_ ENSG00000102699|ENST00000381989|PARP4;ENST00000435945.1_1_Y:28761086-28769767:-|nuORF;ENST00000446672.2_1_13:19955792-19968894:+|nuORF 29.84058131909904 0.1515068451768857 4 [PS]{M(Oxidation (M))|F}PD{I|L}PKV 9 0 + 67.105 0.0 0.0 6.7203 6.7203 84.649 0.0 0.0 0.0 22.37643016799588 6.03994491105162 6.03994491105162 6.03994491105162 0 1.3494850021680094 1.5228787452803376 0.0 0.0 + + [PS]{M(Oxidation (M))|F}PD{I|L}PKV;[PS]{M(Oxidation (M))|F}PD{I|L}V[KP] 6.7203;6.1155 +;- + 168 + 1 1.136 42984.7 1.0 10430 4913 15341 HBL1_DMSO_200M_050219_2,15345 HBL1_DMSO_200M_050219_2,15345,SPFPDIPKV False True SPFPDIPKV 80.726297 500.279193103313 365199888.0 15341.0 ENST00000446672.2_1_13:19955792-19968894:+|nuORF;;ENSG00000102699|ENST00000381989|PARP4;;ENST00000435945.1_1_Y:28761086-28769767:-|nuORF 7.53902800877889 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15346 80.727 7.1 6923300.0 25 0 444930.0 + 4265 DAPVALVVHM 10 71 526.2841237750652 1050.5536946169302 2 526.2844726443291 MULTI CID FTMS 0 0 0 15341 5203809.0 1.0 0 0.0 5 Unmodified _DAPVALVVHM_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 50.855029805455786 0.0751325592344988 4 {[DA]|[EG]}PVA{I|L}VV[HM] 10 0 + 67.259 0.0 0.0 6.4023 6.4023 91.482 0.0 0.0 0.0 27.82989769871007 7.269987279362624 7.269987279362624 26.12879284507555 0 0.9634679910804403 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}PVA{I|L}VV[HM];{I|L}{I|L}G[WQ]AV[HQ];[Q{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}AV[HQ] 6.4023;3.9151;1.6059 +;-;- + 221 + 1 1.136 45190.1 1.0 10431 4913 15341 HBL1_DMSO_200M_050219_2,15346 HBL1_DMSO_200M_050219_2,15346,DAPVALVVHM True True DAPVALVVHM 80.727474 526.284472644329 75883384.0 15341.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;ENST00000487229.6_1_17:12905763-12906899:-|nuORF 7.861271858215332 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15347 80.729 52.0 1254300.0 25 0 116990.0 + 4063 DAMFPVTHI 9 87 515.7546649700338 1029.4947770068677 2 515.7553588747978 MULTI CID FTMS 0 0 0 15341 917290.0625 0.9553311084038648 1 -0.0908126831054687 6 Unmodified _DAMFPVTHI_ ENSG00000188191|ENST00000537384|PRKAR1B 36.506200033944 0.094635877243972 4 A{M(Oxidation (M))|F}PVTH{I|L} 7 2 43.546 0.0 0.0 4.2298 0.0 0.0 246.04551050471747 0.0 246.04551050471747 0.0 23.05095496262428 0.0 0.0 0 0.4247425010840047 0.0 0.7742275032520141 0.0 A{M(Oxidation (M))|F}PVTH{I|L} 4.2298 - 220 + 1 1.136 54686.4 1.0 10432 4913 15341 HBL1_DMSO_200M_050219_2,15347 HBL1_DMSO_200M_050219_2,15347,DAMFPVTHI True True DAMFPVTHI 80.728843 515.755358874798 11072225.0 15341.0 ENSG00000188191|ENST00000537384|PRKAR1B 8.245270411173502 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15348 80.731 129.0 575130.0 25 0 50431.0 + 22630 LPYPAPEGIAV 11 98 563.8110810446944 1125.6076091561888 2 563.8110229372978 MULTI CID FTMS 0 0 0 15341 781695.25 1.0 0 0.0 7 Unmodified _LPYPAPEGIAV_ ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR 29.081581746732265 0.4093582134107448 4 [EP]G{I|L}AP{I|L}{M(Oxidation (M))|F}{I|L}AV 11 5 + 54.188 0.0 0.0 4.8141 4.8141 76.0 0.0 0.0 0.0 3.872735630574091 33.55321092325536 3.872735630574091 5.228787452803374 0 0.4247425010840047 0.0 0.0 0.0 [EP]G{I|L}AP{I|L}{M(Oxidation (M))|F}{I|L}AV;[EP]G{I|L}{I|L}AP{M(Oxidation (M))|F}{I|L}AV;[EP]G{I|L}A{I|L}P{M(Oxidation (M))|F}{I|L}AV;{[VA]|[{I|L}G]}[EP]AP{I|L}{M(Oxidation (M))|F}{I|L}AV;[{I|L}P]{[DA]|[EG]}AP{I|L}{M(Oxidation (M))|F}{I|L}AV;[EP]G[PA]{I|L}{I|L}{M(Oxidation (M))|F}{I|L}AV;{[VA]|[{I|L}G]}[EP]{I|L}AP{M(Oxidation (M))|F}{I|L}AV;[{I|L}P]{[DA]|[EG]}{I|L}AP{M(Oxidation (M))|F}{I|L}AV;{[VA]|[{I|L}G]}[EP]A{I|L}P{M(Oxidation (M))|F}{I|L}AV;[{I|L}P]{[DA]|[EG]}A{I|L}P{M(Oxidation (M))|F}{I|L}AV 4.8141;4.3496;4.2792;4.2604;4.2338;3.8396;3.7959;3.7693;3.7255;3.6989 -;-;-;-;-;-;-;-;-;- 1211 1 1.136 62586.0 1.0 10433 4913 15341 HBL1_DMSO_200M_050219_2,15348 HBL1_DMSO_200M_050219_2,15348,LPYPAPEGIAV False True LPYPAPEGIAV 80.731495 563.811022937298 5279999.5 15341.0 ENSG00000183337|ENST00000378444|BCOR;;nc|ENSG00000183337|Q6W2J9-3|BCOR;;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;;nc|ENSG00000183337|Q6W2J9-2|BCOR;;nc|ENSG00000183337|Q6W2J9-4|BCOR 3.629414637883504 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15349 80.733 79.0 1288200.0 25 0 184070.0 + -1 LPDSKSFM 8 95 470.7263908802107 939.4382288272216 2 470.7263061404228 MULTI CID FTMS 0 0 0 15341 780075.5 0.2452093519767658 -28 2.9419097900390625 8 Oxidation (M) _LPDSKSFM(Oxidation (M))_ REV__ENSG00000124772|ENST00000244751|CPNE5 19.438996006549623 0.6237395211498085 4 {I|L}A 2 -1 37.307 0.0 0.0 3.9712 0.0 0.0 0.0 752.2970326416963 752.2970326416963 19.04098056724897 0.0 0.0 0.0 0 0.2614393726401688 1.5228787452803376 0.0 0.0 {I|L}A 3.9712 - 150 + 1 1.136 83235.6 1.0 10434 4913 15341 HBL1_DMSO_200M_050219_2,15349 HBL1_DMSO_200M_050219_2,15349,LPDSKSFM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15350 80.735 86.0 1080000.0 25 0 213850.0 + 6561 EALPVKLI 8 90 441.7864763685225 881.558399803845 2 441.7864562869072 MULTI CID FTMS 0 0 0 15341 769207.125 0.3086140930257051 -2 0.2258148193359375 9 Unmodified _EALPVKLI_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;nc|ENSG00000171848|P31350-2|RRM2 46.92087301778293 0.1537303740847981 4 [VP]K{I|L}{I|L} 5 3 25.853 0.0 0.0 2.9327 0.0 0.0 0.0 328.14852366542624 328.14852366542624 2.621571592199672 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + [VP]K{I|L}{I|L} 2.9327 + + 176 1 1.136 77037.1 1.0 10435 4913 15341 HBL1_DMSO_200M_050219_2,15350 HBL1_DMSO_200M_050219_2,15350,EALPVKLI False True EALPVKLI 80.735214 441.786456286907 20283542.0 15341.0 ENSG00000171848|ENST00000304567|RRM2;;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;;nc|ENSG00000171848|P31350-2|RRM2 2.573577046394348 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15351 80.738 131.0 580000.0 25 0 64169.0 -1 0 95 881.9053212946873 1761.7960896561744 2 881.9046508669853 MULTI CID FTMS 0 0 0 15341 519656.375 0.095249606721004 4 -0.4028167724609375 10 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 69.228 0.0 0.0 3.9294 3.9294 48.484 0.0 0.0 0.0 1.9449258300955563 4.88714332545382 1.9449258300955563 0.0 0 0.9124379954164592 1.3010299956639813 0.4247425010840047 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YKV{I|L};[YQ]V[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]AQQDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQDA{M(Oxidation (M))|F}YKV{I|L};[YQ]V{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQDA{M(Oxidation (M))|F}YKV{I|L};[YQ]V{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQDA{M(Oxidation (M))|F}YQV{I|L};[KT]EY{M(Oxidation (M))|F}ADQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ADQQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VC(Carbamidomethyl (C)){I|L} 3.9294;3.9294;3.819;3.819;3.7205;3.7205;3.6101;3.6101;3.5015;3.4885 -;-;-;-;-;-;-;-;-;- 1825 1 1.136 59481.2 1.0 10436 4913 15341 HBL1_DMSO_200M_050219_2,15351 HBL1_DMSO_200M_050219_2,15351, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15352 80.745 384.0 590400.0 25 0 41687.0 -1 YQRCKWEYQMI 11 130 782.3589450633284 1562.7033371934567 2 782.3547851443291 MULTI CID FTMS 0 0 0 15341 471764.625 0.3016122328339091 -2 0.2258148193359375 11 Oxidation (M) _YQRCKWEYQM(Oxidation (M))I_ ENST00000527531.5_1_11:108253785-108256679:-|nuORF 5.296884461304476 0.8501568894076437 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QDA{M(Oxidation (M))|F}YQV{I|L} 13 -1 + 126.88 0.0 0.0 8.1191 8.1191 86.695 0.0 0.0 0.0 4.698565171985393 16.642078980768076 4.698565171985393 4.698565171985393 0 1.4916440611282624 1.3979400086720375 1.6721675119240516 2.5055233930907206 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QDA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]DA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QDA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[C(Carbamidomethyl (C))G]|[NC]}TDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QW{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQDA{M(Oxidation (M))|F}Y[AG]V{I|L};[HD]EAQ[AG]DA{M(Oxidation (M))|F}YQV{I|L};[HD]EA[AG]QDA{M(Oxidation (M))|F}YQV{I|L} 8.1191;7.8184;7.638;7.5385;7.5385;7.3009;7.275;7.2379;7.2379;7.2379 -;-;-;-;-;-;-;-;-;- 10785 1 1.136 161643.3 1.0 10437 4913 15341 HBL1_DMSO_200M_050219_2,15352 HBL1_DMSO_200M_050219_2,15352,YQRCKWEYQMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15353 80.748 184.0 1017100.0 25 0 81913.0 + 2864 AVDLTLPKV 9 155 478.29491773202767 954.5752825308554 2 478.2950012087822 MULTI CID FTMS 0 0 0 15341 363158.75 0.2105963389072508 -5 0.53570556640625 12 Unmodified _AVDLTLPKV_ ENSG00000196419|ENST00000360079|XRCC6;ENST00000478914.1_1_22:42052971-42057696:+|nuORF;ENST00000518193.1_1_8:63767865-63768189:-|nuORF;nc|ENSG00000196419|P12956-2|XRCC6 32.78568957990786 0.1150597335874693 4 {[VA]|[{I|L}G]}D{I|L}T{I|L}PKV 9 0 + 61.648 0.0 0.0 6.4581 6.4581 84.377 0.0 0.0 0.0 40.2726570743409 3.291812460476251 3.291812460476251 6.627578316815743 0 0.8494850021680094 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}D{I|L}T{I|L}PKV;{[VA]|[{I|L}G]}D{I|L}T{I|L}KPV;{[VA]|[{I|L}G]}D{I|L}T{I|L}V[KP] 6.4581;5.7638;5.0416 +;-;- + 997 + 1 1.136 141505.5 1.0 10438 4913 15341 HBL1_DMSO_200M_050219_2,15353 HBL1_DMSO_200M_050219_2,15353,AVDLTLPKV True True AVDLTLPKV 80.74838 478.295001208782 77366418.0 15341.0 ENSG00000196419|ENST00000360079|XRCC6;;nc|ENSG00000196419|P12956-2|XRCC6;;ENST00000518193.1_1_8:63767865-63768189:-|nuORF;;ENST00000478914.1_1_22:42052971-42057696:+|nuORF 5.83990478515625 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15354 80.757 478.0 595670.0 25 0 53120.0 + 38171 TPPVVLRL 8 165 447.7920228055828 893.5694926779656 2 447.7918578982353 MULTI CID FTMS 0 0 0 15341 353979.875 0.2288291137603932 -3 0.2766265869140625 13 Unmodified _TPPVVLRL_ ENSG00000181163|ENST00000296930|NPM1;ENST00000412580.1_1_2:122466160-122466664:-|nuORF;ENST00000434232.1_1_7:36858782-36858980:+|nuORF;ENST00000502784.2_1_5:93019019-93019256:-|nuORF;ENST00000518587.1_1_5:170814889-170819841:+|nuORF;nc|ENSG00000181163|P06748-2|NPM1;nc|ENSG00000181163|P06748-3|NPM1 64.23631603340823 0.116217441302575 4 TPPVV{I|L}R{I|L} 8 0 + 77.803 0.0 0.0 8.7069 8.7069 86.627 0.0 0.0 0.0 61.14716077165532 12.312988749020946 12.312988749020946 3.979400086720375 0 0.9916440611282626 2.0 0.0 0.3252574989159953 + + TPPVV{I|L}R{I|L};TPPVVR{I|L}{I|L};TPPV{I|L}VR{I|L};TPPV{I|L}RV{I|L};TPPV{I|L}R{I|L}V;TP{I|L}[VP]VR{I|L};TP{I|L}[VP]RV{I|L};TP{I|L}[VP]R{I|L}V;TV{[HG]|PP}V{I|L}R{I|L};TV{[HG]|PP}VR{I|L}{I|L} 8.7069;8.2616;7.8804;7.2892;7.2243;5.7471;5.1559;5.091;2.8523;2.4069 +;-;-;-;-;-;-;-;-;- + 617 + 1 1.136 220803.4 1.0 10439 4913 15341 HBL1_DMSO_200M_050219_2,15354 HBL1_DMSO_200M_050219_2,15354,TPPVVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15355 80.764 417.0 1108200.0 25 0 122370.0 + 2371 AQLTHDELIQL 11 143 640.8467169827675 0 640.8476440310478 PEAK CID FTMS 0 0 0 15341 329763.375 0.8682990553434267 -1 0.1411056518554687 14 Unmodified _AQLTHDELIQL_ ENSG00000156675|ENST00000330843|RAB11FIP1;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;ENST00000523182.5_1_8:37720415-37730726:-|nuORF;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1 53.31671820480216 0.0324464488377707 4 Q{I|L}AQ{[QG]|[NA]}AQ{I|L} 9 7 42.189 0.0 0.0 3.2969 0.0 0.0 131.09667995987235 208.0734346979125 339.1701146577849 0.0 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.8494850021680094 Q{I|L}AQ{[QG]|[NA]}AQ{I|L} 3.2969 - 7344 + 1 1.136 339829.6 1.0 10440 4913 15341 HBL1_DMSO_200M_050219_2,15355 HBL1_DMSO_200M_050219_2,15355,AQLTHDELIQL True True AQLTHDELIQL 80.764293 640.847644031048 3473077.5 15341.0 nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;;ENST00000523182.5_1_8:37720415-37730726:-|nuORF;;ENSG00000156675|ENST00000330843|RAB11FIP1 2.357835173606873 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15356 80.772 427.0 562970.0 25 0 86931.0 + 37664 TLMDMRLSQV 10 180 597.3042383960715 1192.5939238589428 2 597.3049804568291 MULTI CID FTMS 0 0 0 15341 298232.90625 0.5372921490834714 -1 0.1411056518554687 15 Unmodified _TLMDMRLSQV_ ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6 79.42699986076722 0.0175374121712975 4 T{I|L}MDY[{I|L}T]Q 8 4 68.37 0.0 0.0 5.7329 0.0 0.0 0.0 224.10503565006096 224.10503565006096 31.16030104613644 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.2887254899964357 1.960409376976188 T{I|L}MDY[{I|L}T]Q 5.7329 - 19034 + 1 1.136 177195.9 1.0 10441 4913 15341 HBL1_DMSO_200M_050219_2,15356 HBL1_DMSO_200M_050219_2,15356,TLMDMRLSQV True True TLMDMRLSQV 80.771909 597.304980456829 3289023.25 15341.0 nc|ENSG00000101161|O94906-2|PRPF6;;ENSG00000101161|ENST00000266079|PRPF6 7.082663695017497 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15357 80.78 483.0 178540.0 25 0 30843.0 + 29578 QLRVIRWMVGL 11 128 685.9083122893809 1369.8020716455617 2 685.9078857302666 MULTI CID FTMS 0 0 0 15341 240040.15625 0.686572784606753 -2 0.2258148193359375 16 Unmodified _QLRVIRWMVGL_ REV__ENST00000392396.7_2_3:195796375-195798346:-|nuORF 1.4819007175156935 0.86815623132643 4 {[QN]|[E{I|L}]|[KN]}KMA{I|L} 6 -1 20.811 0.0 0.0 1.5193 0.0 0.0 0.0 681.4081256829242 681.4081256829242 7.703959621222204 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}KMA{I|L} 1.5193 - 209 1 1.136 76062.1 1.0 10442 4913 15341 HBL1_DMSO_200M_050219_2,15357 HBL1_DMSO_200M_050219_2,15357,QLRVIRWMVGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15358 80.791 602.0 377520.0 25 0 30322.0 1662 ALNHTEEL 8 214 309.49051870186247 925.4497267057876 3 309.4899474978447 MULTI CID FTMS 0 0 0 15341 228400.5 0.5927992182542309 2 -0.171295166015625 17 Unmodified _ALNHTEEL_ ENST00000394487.4_1_9:120466806-120470508:+|nuORF 19.438996006549623 0.6237395211498085 4 {I|L}{M(Oxidation (M))|F} 2 7 16.454 0.0 0.0 1.7779 0.0 0.0 647.3028213720803 0.0 647.3028213720803 0.0 2.4742501084004687 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.7779 - 298 1 1.136 180628.8 1.0 10443 4913 15341 HBL1_DMSO_200M_050219_2,15358 HBL1_DMSO_200M_050219_2,15358,ALNHTEEL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15359 80.801 481.0 159940.0 25 0 13739.0 -1 VYCFFCSSSI 10 133 635.2669620991369 1268.5193712650737 2 635.2675659060478 MULTI CID FTMS 0 0 0 15341 206978.78125 1.0 0 0.0 18 2 Carbamidomethyl (C) _VYC(Carbamidomethyl (C))FFC(Carbamidomethyl (C))SSSI_ ENST00000379310.7_2_13:42141480-42141777:-|nuORF 15.847184025352805 0.5816416552707754 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}M[TP]CP{[CT]|[{M(Oxidation (M))|F}G]} 11 -1 + 36.47 0.0 0.0 2.875 2.875 64.5 0.0 0.0 0.0 6.33549247037714 5.555173278498316 5.555173278498316 1.8391659656763863 0 0.0 2.0 0.5 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}M[TP]CP{[CT]|[{M(Oxidation (M))|F}G]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[ES]|[DT]|[{I|L}C]}M[TP]CP{[CT]|[{M(Oxidation (M))|F}G]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[{M(Oxidation (M))|F}C]|[YS]}P[TP]CP{[CT]|[{M(Oxidation (M))|F}G]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}M[DN]P[{M(Oxidation (M))|F}E];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}M[TP]CG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]GC{[MG]|[TS]}[MD]PPTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[ES]|[DT]|[{I|L}C]}M[WD]P{[CT]|[{M(Oxidation (M))|F}G]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[ES]|[DT]|[{I|L}C]}M[DN]P[{M(Oxidation (M))|F}E];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[ES]|[DT]|[{I|L}C]}M[TP]CG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]GC{[MG]|[TS]}[MD]PPS{I|L} 2.875;2.73;2.4927;2.4371;2.4004;2.3756;2.2893;2.2893;2.2554;2.2208 -;-;-;-;-;-;-;-;-;- 1298 1 1.136 61495.6 1.0 10444 4913 15341 HBL1_DMSO_200M_050219_2,15359 HBL1_DMSO_200M_050219_2,15359,VYCFFCSSSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15360 80.809 497.0 387160.0 25 0 41270.0 + 38748 TVANQAIWL 9 194 508.28261295359846 1014.5506729739968 2 508.2847778201103 MULTI CID FTMS 0 0 0 15341 213367.59375 1.0 0 0.0 19 Unmodified _TVANQAIWL_ ENST00000446936.6_1_3:128889931-128890333:-|nuORF;ENST00000451728.6_2_3:128889931-128890333:-|nuORF 18.1463463914782 0.3454829746528889 4 [{I|L}A]QKWA[W{I|L}] 8 6 + 21.407 0.0 0.0 2.11 2.11 69.618 0.0 0.0 0.0 0.9612484009060012 6.942610842869328 0.9612484009060012 5.87563242817804 0 0.3494850021680094 0.9208187539523752 0.0 0.2742275032520141 [{I|L}A]QKWA[W{I|L}];[KT]{M(Oxidation (M))|F}H{I|L}A[W{I|L}];[Q{I|L}]AKWA[W{I|L}];[Q{I|L}]KAWA[W{I|L}];[KT]{M(Oxidation (M))|F}HA{I|L}[W{I|L}];[{I|L}A]GKAWA[W{I|L}];[{I|L}A]GAKWA[W{I|L}];[PS]KKWA[W{I|L}];{[TV]|[{I|L}S]}P{[WT]|[RM]}{I|L}[W{I|L}];[{I|L}A]QK{[DA]|[EG]}A[W{I|L}] 2.11;1.5308;1.519;1.519;1.5187;1.4452;1.4452;1.4275;1.3095;1.197 -;-;-;-;-;-;-;-;-;- 1368 1 1.136 152041.2 1.0 10445 4913 15341 HBL1_DMSO_200M_050219_2,15360 HBL1_DMSO_200M_050219_2,15360,TVANQAIWL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15362 80.814 9.0 4968700.0 25 0 437430.0 + 44939 YPPWPGKIV 9 72 528.7980860103809 1055.5816190875616 2 528.7977172732353 MULTI CID FTMS 0 0 0 15361 4934729.5 0.4328009253940107 -6 0.6265182495117188 1 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 36.04419817259434 0.0971720506436186 4 YPPW 4 5 53.972 0.0 0.0 5.113 0.0 0.0 0.0 509.3106833058101 509.3106833058101 42.37842840780033 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + YPPW 5.113 + + 75 + 1 1.115 44555.1 1.0 10446 4914 15361 HBL1_DMSO_200M_050219_2,15362 HBL1_DMSO_200M_050219_2,15362,YPPWPGKIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15363 80.815 36.0 1337900.0 25 0 141280.0 + 15327 IPLMTKTEL 9 92 523.3030805482477 1044.5916081632954 2 523.3060790896416 MULTI CID FTMS 0 0 0 15361 1341062.0 0.6746712041783409 4 -0.4007492065429687 2 Unmodified _IPLMTKTEL_ REV__ENST00000367122.6_1_6:158491407-158491521:+|nuORF 20.453626601364224 0.2830276176381075 4 [{I|L}P]NHP{I|L}E 7 -1 52.694 0.0 0.0 5.0445 0.0 0.0 0.0 241.148379305388 241.148379305388 31.72508200162774 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3252574989159953 [{I|L}P]NHP{I|L}E 5.0445 - 354 1 1.115 44039.9 1.0 10447 4914 15361 HBL1_DMSO_200M_050219_2,15363 HBL1_DMSO_200M_050219_2,15363,IPLMTKTEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15364 80.816 18.0 2051000.0 25 0 283120.0 + 1512 ALIDEGHGI 9 54 462.7437540417929 923.4729551503858 2 462.7437316775322 MULTI CID FTMS 0 0 0 15361 2637826.0 1.0 0 0.0 3 Unmodified _ALIDEGHGI_ REV__nc|ENSG00000221883|Q8N7S6|ARIH2OS 12.531546534597751 0.4974689918368763 4 [{I|L}A]P 3 -1 34.705 0.0 0.0 3.7581 0.0 0.0 0.0 639.2781136401147 639.2781136401147 27.715299873086607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P 3.7581 - 7 + 1 1.115 36692.4 1.0 10448 4914 15361 HBL1_DMSO_200M_050219_2,15364 HBL1_DMSO_200M_050219_2,15364,ALIDEGHGI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15365 80.817 23.0 1688900.0 25 0 200530.0 + 40145 VGLVDVPHP 9 74 466.7622856466979 931.5100183601958 2 466.7624389529228 MULTI CID FTMS 0 0 0 15361 1839555.625 1.0 0 0.0 4 Unmodified _VGLVDVPHP_ REV__ENSG00000214756|ENST00000532971|CSKMT;REV__ENST00000398922.6_1_11:62433857-62434520:+|nuORF 11.640296217721598 0.521594087909532 4 [VG]{I|L}V 4 -1 37.435 0.0 0.0 4.0187 0.0 0.0 0.0 560.2439058893186 560.2439058893186 23.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [VG]{I|L}V 4.0187 + + 64 + 1 1.115 35810.2 1.0 10449 4914 15361 HBL1_DMSO_200M_050219_2,15365 HBL1_DMSO_200M_050219_2,15365,VGLVDVPHP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15366 80.818 25.0 2114200.0 25 0 326130.0 + 11454 GIEPYLWA 8 67 474.745250521032 947.475948108864 2 474.7455627322197 MULTI CID FTMS 0 0 0 15361 1410210.125 0.8501072761429508 -2 0.2319183349609375 5 Unmodified _GIEPYLWA_ REV__ENSG00000100359|ENST00000248929|SGSM3;REV__ENST00000478085.5_1_22:40800171-40802852:+|nuORF;REV__nc|ENSG00000100359|Q96HU1-2|SGSM3 10.183394434864962 0.7604730176254005 4 VA 2 -1 20.969 0.0 0.0 2.2132 0.0 0.0 0.0 774.3489816567795 774.3489816567795 6.365006360318688 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA 2.2132 - 19 + 1 1.115 47988.0 1.0 10450 4914 15361 HBL1_DMSO_200M_050219_2,15366 HBL1_DMSO_200M_050219_2,15366,GIEPYLWA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15367 80.82 76.0 921900.0 25 0 134180.0 26780 PAGVSLVLD 9 78 435.74996689316646 869.4853808531329 2 435.7502014040947 MULTI CID FTMS 0 0 0 15361 1295441.0 0.78474235100707 1 -0.0804824829101562 6 Unmodified _PAGVSLVLD_ ENSG00000118523|ENST00000367976|CCN2;nc|ENSG00000118523|P29279-2|CCN2 24.67388899826682 0.2172451872415813 4 [QP]VS{I|L} 5 5 35.662 0.0 0.0 4.1015 0.0 0.0 0.0 342.16565364049546 342.16565364049546 19.20818753952375 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.0 0.0 [QP]VS{I|L} 4.1015 - 130 1 1.115 62250.3 1.0 10451 4914 15361 HBL1_DMSO_200M_050219_2,15367 HBL1_DMSO_200M_050219_2,15367,PAGVSLVLD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15368 80.821 48.0 480410.0 25 0 135960.0 25463 NEIEKKRNLIP 11 43 677.3946198570956 1352.774686780991 2 677.3956786990166 MULTI CID FTMS 0 0 0 15361 1150687.875 1.0 0 0.0 7 Unmodified _NEIEKKRNLIP_ ENSG00000188738|ENST00000424728|FSIP2 0.9622753412299312 0.8706078577147922 4 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 3 8 4.437 0.0 0.0 0.32799 0.0 0.0 0.0 993.5805088847598 993.5805088847598 4.436974992327125 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 0.32799 + + 3 1 1.115 30217.8 1.0 10452 4914 15361 HBL1_DMSO_200M_050219_2,15368 HBL1_DMSO_200M_050219_2,15368,NEIEKKRNLIP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15369 80.823 51.0 659840.0 25 0 64760.0 + 21369 LPFQKGYLV 9 68 532.8107392079321 1063.606925482664 2 532.8110839724541 MULTI CID FTMS 0 0 0 15361 760539.75 0.5308069152046248 2 -0.1891555786132812 8 Unmodified _LPFQKGYLV_ ENSG00000075089|ENST00000188312|ACTR6;ENST00000550813.5_1_12:100594629-100599999:+|nuORF;nc|ENSG00000075089|Q9GZN1-2|ACTR6 34.10243960390752 0.1078313939113124 4 {I|L}P{M(Oxidation (M))|F}Q 4 5 40.918 0.0 0.0 3.8471 0.0 0.0 0.0 575.3208712213499 575.3208712213499 10.723418215173195 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + {I|L}P{M(Oxidation (M))|F}Q 3.8471 + + 112 + 1 1.115 36052.7 1.0 10453 4914 15361 HBL1_DMSO_200M_050219_2,15369 HBL1_DMSO_200M_050219_2,15369,LPFQKGYLV True True LPFQKGYLV 80.822686 532.811083972454 14459851.0 15361.0 ENST00000550813.5_1_12:100594629-100599999:+|nuORF;;nc|ENSG00000075089|Q9GZN1-2|ACTR6;;ENSG00000075089|ENST00000188312|ACTR6 7.278432051340739 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15370 80.825 85.0 898100.0 25 0 158970.0 -1 ALLETYCA 8 80 314.15345579277783 939.4385379785336 3 314.1530944705009 MULTI CID FTMS 0 0 0 15361 744271.8125 0.377366967148614 6 -0.6432418823242188 9 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 20.453626601364224 0.6087503291685402 4 A{I|L}{I|L} 3 -1 50.005 0.0 0.0 5.3229 0.0 0.0 0.0 639.2112226352855 639.2112226352855 38.57840941039747 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 A{I|L}{I|L} 5.3229 + + 49 + 1 1.115 66327.6 1.0 10454 4914 15361 HBL1_DMSO_200M_050219_2,15370 HBL1_DMSO_200M_050219_2,15370,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15371 80.83 305.0 416000.0 25 0 89939.0 + 35860 SVLHKPLVSL 10 116 546.8400888769715 1091.665624820743 2 546.8402587771416 MULTI CID FTMS 0 0 0 15361 654672.0625 0.6820123608946833 2 -0.1891555786132812 10 Unmodified _SVLHKPLVSL_ REV__ENSG00000164078|ENST00000296474|MST1R;REV__nc|ENSG00000164078|Q04912-2|MST1R;REV__nc|ENSG00000164078|Q04912-3|MST1R;REV__nc|ENSG00000164078|Q04912-4|MST1R;REV__nc|ENSG00000164078|Q04912-5|MST1R;REV__nc|ENSG00000164078|Q04912-6|MST1R;REV__nc|ENSG00000164078|Q04912-7|MST1R 3.5964929083625545 0.7100006075494749 4 {M(Oxidation (M))|F} 1 -1 10.596 0.0 0.0 0.97062 0.0 0.0 926.585941448476 0.0 926.585941448476 0.0 0.2173284689054533 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.97062 - 19 + 1 1.115 102530.4 1.0 10455 4914 15361 HBL1_DMSO_200M_050219_2,15371 HBL1_DMSO_200M_050219_2,15371,SVLHKPLVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15372 80.836 322.0 661090.0 25 0 57433.0 + 15377 IPNFDVREI 9 173 551.7984729563345 1101.582392979469 2 551.7975341677666 MULTI CID FTMS 0 0 0 15361 614984.0625 0.2967107494577048 4 -0.4007492065429687 11 Unmodified _IPNFDVREI_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 59.36838082759317 0.0264317782606298 4 {I|L}PN{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L} 9 0 + 90.997 0.0 0.0 8.2605 8.2605 92.293 0.0 0.0 0.0 41.8882691213466 7.447274948966935 7.447274948966935 9.208187539523747 0 1.305462187404089 1.5228787452803376 0.3054621874040891 0.805462187404089 + + {I|L}PN{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L};{I|L}PGG{M(Oxidation (M))|F}DV{[RE]|[WV]}{I|L};{I|L}PN{M(Oxidation (M))|F}DV[W{I|L}]V;{I|L}PN{M(Oxidation (M))|F}D{I|L}[RD]{I|L};{I|L}PN{M(Oxidation (M))|F}D{I|L}[KA]{[QG]|[NA]};{I|L}PGG{M(Oxidation (M))|F}D{I|L}[RD]{I|L};{I|L}PN{M(Oxidation (M))|F}D{I|L}{[RE]|[WV]}V;{I|L}PN{M(Oxidation (M))|F}D[{I|L}T]SPV;{I|L}PN{M(Oxidation (M))|F}{I|L}D[RD]{I|L};{I|L}PGG{M(Oxidation (M))|F}D{I|L}[KA]{[QG]|[NA]} 8.2605;7.4246;7.4168;7.3943;6.9491;6.5584;6.5506;6.175;6.1425;6.1172 +;-;-;-;-;-;-;-;-;- + 2751 + 1 1.115 171247.2 1.0 10456 4914 15361 HBL1_DMSO_200M_050219_2,15372 HBL1_DMSO_200M_050219_2,15372,IPNFDVREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15373 80.838 99.0 686920.0 25 0 97049.0 + 13216 HGMIMLRI 8 83 485.7693664773744 969.5241800215488 2 485.7686340212822 MULTI CID FTMS 0 0 0 15361 584076.125 0.1412805009095561 2 -0.1891555786132812 12 Unmodified _HGMIMLRI_ ENSG00000095139|ENST00000264028|ARCN1;nc|ENSG00000095139|P48444-2|ARCN1 32.116972079565 0.368454113111938 4 HGM{I|L} 4 4 50.531 0.0 0.0 5.2119 0.0 0.0 0.0 528.2989596002561 528.2989596002561 24.332854230089147 0.0 0.0 0.0 0 1.274227503252014 0.8860566476931632 0.0 0.0 + HGM{I|L} 5.2119 + + 96 + 1 1.115 57192.7 1.0 10457 4914 15361 HBL1_DMSO_200M_050219_2,15373 HBL1_DMSO_200M_050219_2,15373,HGMIMLRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15374 80.841 139.0 612540.0 25 0 48046.0 + 4375 DAVFVLKPV 9 98 494.29737499315337 986.5801970531068 2 494.2969848513603 MULTI CID FTMS 0 0 0 15361 559689.4375 1.0 0 0.0 13 Unmodified _DAVFVLKPV_ ENSG00000197006|ENST00000358154|METTL9;ENST00000564733.1_1_16:21666528-21666750:+|nuORF;nc|ENSG00000197006|Q9H1A3-2|METTL9 36.12702656103203 0.0967173616627612 4 {[RE]|[WV]}{M(Oxidation (M))|F}V{I|L}KPV 8 2 + 44.285 0.0 0.0 4.4888 4.4888 84.498 0.0 0.0 0.0 32.5024770075718 1.870866433571443 1.870866433571443 44.28521362514086 0 1.2059771852360797 0.0 0.0 0.0 {[RE]|[WV]}{M(Oxidation (M))|F}V{I|L}KPV 4.4888 - 180 + 1 1.115 67839.1 1.0 10458 4914 15361 HBL1_DMSO_200M_050219_2,15374 HBL1_DMSO_200M_050219_2,15374,DAVFVLKPV True True DAVFVLKPV 80.840949 494.29698485136 3547747.75 15361.0 ENSG00000197006|ENST00000358154|METTL9;;ENST00000564733.1_1_16:21666528-21666750:+|nuORF;;nc|ENSG00000197006|Q9H1A3-2|METTL9 8.634588559468588 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15375 80.848 417.0 406990.0 25 0 68058.0 + -1 QVLDSLCQM 9 167 555.2514075022132 1108.4882620712262 2 555.2519409060478 MULTI CID FTMS 0 0 0 15361 351835.09375 0.58217216628392 -2 0.2319183349609375 14 Carbamidomethyl (C),Oxidation (M) _QVLDSLC(Carbamidomethyl (C))QM(Oxidation (M))_ REV__ENST00000376214.5_1_9:87285518-87285842:+|nuORF 43.85829265575387 0.0542763391141878 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SN{I|L}D 7 -1 68.593 0.0 0.0 6.188 0.0 0.0 0.0 336.07012794326545 336.07012794326545 26.14593550382132 0.0 0.0 0.0 0 1.5356668758921828 2.0 0.4247425010840047 0.6549471895720984 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SN{I|L}D 6.188 - 712 + 1 1.115 133541.7 1.0 10459 4914 15361 HBL1_DMSO_200M_050219_2,15375 HBL1_DMSO_200M_050219_2,15375,QVLDSLCQM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15376 80.852 162.0 364770.0 25 0 59644.0 + 45084 YPYLGPSTL 9 98 505.7634486945394 1009.5123444558787 2 505.7674438357353 MULTI CID FTMS 0 0 0 15361 395260.53125 0.1017170830479519 4 -0.4007492065429687 15 Unmodified _YPYLGPSTL_ ENSG00000136631|ENST00000644510|VPS45;nc|ENSG00000136631|Q9NRW7-2|VPS45 34.18733598223924 0.1073653526364521 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}YG 5 6 39.208 0.0 0.0 3.8839 0.0 0.0 0.0 413.2025049385539 413.2025049385539 6.556649761518969 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}YG 3.8839 - 480 1 1.115 48137.0 1.0 10460 4914 15361 HBL1_DMSO_200M_050219_2,15376 HBL1_DMSO_200M_050219_2,15376,YPYLGPSTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15377 80.86 462.0 695320.0 25 0 162050.0 + -1 GQEAVLLTV 9 106 929.5079708756026 1857.001388818005 2 929.5120117068292 MULTI CID FTMS 0 0 0 15361 374874.03125 1.0 0 0.0 16 ENSG00000177302|ENST00000321105|TOP3A;nc|ENSG00000177302|Q13472-3|TOP3A;nc|ENSG00000177302|Q13472-2|TOP3A 4 [NP]{I|L}R{I|L}QA 7 -1 30.965 0.0 0.0 1.6675 0.0 0.0 0.0 1061.5282347245363 1061.5282347245363 5.489634511125061 0.0 0.0 0.0 0 0.0 0.0 0.0 1.329689690656103 [NP]{I|L}R{I|L}QA 1.6675 - 12644 1 1.115 209304.5 1.0 10461 4914 15361 HBL1_DMSO_200M_050219_2,15377 HBL1_DMSO_200M_050219_2,15377, False False GQEAVLLTV 80.859813 929.512011706829 1922750.125 15361.0 ENSG00000177302|ENST00000321105|TOP3A;;nc|ENSG00000177302|Q13472-3|TOP3A;;nc|ENSG00000177302|Q13472-2|TOP3A 0.5666940212249756 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15378 80.868 437.0 406120.0 25 0 50744.0 + 16889 KIFSGVFVKV 10 164 562.3470163080498 1122.6794796828997 2 562.3493530154228 MULTI CID FTMS 0 0 0 15361 309531.53125 0.0190799724616821 6 -0.6432418823242188 17 Unmodified _KIFSGVFVKV_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 59.05245873256422 0.0390717477387156 4 K{I|L}{M(Oxidation (M))|F}S[VG]{M(Oxidation (M))|F}VKV 10 0 + 55.842 0.0 0.0 4.974 4.974 72.159 0.0 0.0 0.0 35.40874704440961 1.8740810491244984 1.8740810491244984 2.430380486862944 0 1.9916440611282624 0.721246399047171 0.3252574989159953 0.2887254899964357 + + K{I|L}{M(Oxidation (M))|F}S[VG]{M(Oxidation (M))|F}VKV;K{I|L}{M(Oxidation (M))|F}S[VG]{M(Oxidation (M))|F}VVK;K{I|L}V[YQ]{M(Oxidation (M))|F}VKV;K{I|L}V[YQ]{M(Oxidation (M))|F}VVK;KV{I|L}[YQ]{M(Oxidation (M))|F}VKV;KV{I|L}[YQ]{M(Oxidation (M))|F}VVK;K{I|L}V[RH][RV]C{I|L} 4.974;4.7575;4.1848;3.9683;2.5567;2.3403;1.2462 +;-;-;-;-;-;- + 1459 + 1 1.115 134220.6 1.0 10462 4914 15361 HBL1_DMSO_200M_050219_2,15378 HBL1_DMSO_200M_050219_2,15378,KIFSGVFVKV True True KIFSGVFVKV 80.867588 562.349353015423 425646904.0 15361.0 ENST00000397415.7_1_6:42848808-42854199:+|nuORF;;ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 5.4102783203125 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15379 80.877 486.0 290810.0 25 0 29934.0 + + 34306 RTPATLFAV 9 142 488.2854111915847 0 488.2857543826103 PEAK CID FTMS 0 0 0 15361 291818.6875 1.0 0 0.0 18 Unmodified _SLRMLSVAV_ ENST00000477642.5_1_2:38525261-38527422:-|nuORF;nc|ENSG00000119787|Q8NHH9-2|ATL2;ENSG00000119787|ENST00000378954|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2 36.12702656103203 0.0807574182900477 4 A{M(Oxidation (M))|F}{I|L} 3 -1 23.188 0.0 0.0 2.3793 0.0 0.0 117.07918847834976 523.264764948786 640.3439534271358 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 A{M(Oxidation (M))|F}{I|L} 2.3793 - 303 + 1 1.115 111604.7 1.0 10463 4914 15361 HBL1_DMSO_200M_050219_2,15379 HBL1_DMSO_200M_050219_2,15379,SLRMLSVAV False False RTPATLFAV 80.877336 488.28575438261 2877861.0 15361.0 ENST00000477642.5_1_2:38525261-38527422:-|nuORF;;nc|ENSG00000119787|Q8NHH9-2|ATL2;;ENSG00000119787|ENST00000378954|ATL2;;nc|ENSG00000119787|Q8NHH9-5|ATL2;;nc|ENSG00000119787|Q8NHH9-3|ATL2;;nc|ENSG00000119787|Q8NHH9-4|ATL2 0.8636329347888628 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15380 80.88 154.0 547380.0 25 0 79272.0 -1 0 103 336.104633924523 670.194714915846 2 336.1049072146416 MULTI CID FTMS 0 0 0 15361 274527.0625 0.1050128106824796 -4 0.3674392700195312 19 4 {I|L} 1 -1 10.485 0.0 0.0 1.5644 0.0 0.0 539.0996659429929 0.0 539.0996659429929 0.0 8.010299956639813 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5644 - 16 + 1 1.115 71354.0 1.0 10464 4914 15361 HBL1_DMSO_200M_050219_2,15380 HBL1_DMSO_200M_050219_2,15380, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15381 80.89 541.0 319110.0 25 0 38477.0 + 4640 DAYVLPKL 8 136 459.7682070317223 917.5218611302446 2 459.7681152224541 MULTI CID FTMS 0 0 0 15361 267587.9375 0.0101076718610203 7 -0.7439117431640625 20 Unmodified _DAYVLPKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 39.957323273325 0.2350051964751539 4 {[DA]|[EG]}YV{I|L}PK{I|L} 8 0 + 60.281 0.0 0.0 6.57 6.57 89.812 0.0 0.0 0.0 38.39722572683976 11.893426046896494 11.893426046896494 12.060544824331243 0 1.0138793319624575 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L};{[DA]|[EG]}YV{I|L}{I|L}[KP] 6.57;5.2556 +;- + 362 + 1 1.115 134484.1 1.0 10465 4914 15361 HBL1_DMSO_200M_050219_2,15381 HBL1_DMSO_200M_050219_2,15381,DAYVLPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15383 80.894 8.5 5161400.0 25 0 499370.0 + 25369 NAYEYFTKI 9 66 574.7844102906088 1147.5542676480177 2 574.7850219607353 MULTI CID FTMS 0 0 0 15382 6823734.0 1.0 0 0.0 1 Unmodified _NAYEYFTKI_ ENSG00000030110|ENST00000374467|BAK1;nc|ENSG00000030110|Q16611-2|BAK1 34.93206674587334 0.1032771302489716 4 {[QG]|[NA]}YEY{M(Oxidation (M))|F}TK{I|L} 9 0 + 69.024 0.0 0.0 6.0149 6.0149 91.24 0.0 0.0 0.0 43.3379001364149 6.188711477281501 6.188711477281501 69.02426249482502 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + + {[QG]|[NA]}YEY{M(Oxidation (M))|F}TK{I|L} 6.0149 + + 54 + 1 1.099 38436.7 1.0 10466 4915 15382 HBL1_DMSO_200M_050219_2,15383 HBL1_DMSO_200M_050219_2,15383,NAYEYFTKI True True NAYEYFTKI 80.894054 574.785021960735 51950472.0 15382.0 nc|ENSG00000030110|Q16611-2|BAK1;;ENSG00000030110|ENST00000374467|BAK1 8.40912914276123 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15384 80.895 28.0 1730600.0 25 0 147290.0 + 16925 KILDLETQL 9 98 536.8164907783326 1071.6184286234652 2 536.8171874880791 MULTI CID FTMS 0 0 0 15382 742013.5 0.2052255362024604 2 -0.2315216064453125 2 Unmodified _KILDLETQL_ ENSG00000136811|ENST00000351030|ODF2;ENST00000488909.1_1_9:131260677-131262531:+|nuORF;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2 40.23920728925047 0.0741434193262949 4 D{I|L}ETQ{I|L} 6 3 56.336 0.0 0.0 5.2571 0.0 0.0 354.2643299787125 0.0 354.2643299787125 0.0 32.027048194185056 0.0 0.0 0 1.1382104921644451 0.0 0.3807196863200844 0.0 + D{I|L}ETQ{I|L} 5.2571 + + 485 1 1.099 44714.9 1.0 10467 4915 15382 HBL1_DMSO_200M_050219_2,15384 HBL1_DMSO_200M_050219_2,15384,KILDLETQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15385 80.897 67.0 1059800.0 25 0 73477.0 + 15602 IPYQDLPHL 9 86 548.2952846035856 1094.5760162739712 2 548.2954589724541 MULTI CID FTMS 0 0 0 15382 1109842.375 0.405627575335693 -3 0.3124008178710937 3 Unmodified _IPYQDLPHL_ ENSG00000074416|ENST00000265052|MGLL;ENST00000479967.5_1_3:127434467-127541990:-|nuORF;nc|ENSG00000074416|Q99685-2|MGLL;nc|ENSG00000074416|Q99685|MGLL 57.72198328787511 0.0273433238377839 4 {I|L}PYQD{I|L}PH{I|L} 9 0 + 86.62 0.0 0.0 7.9136 7.9136 94.16 0.0 0.0 0.0 53.432782777407965 7.714813109343083 7.714813109343083 13.455612550363782 0 1.586696871556164 1.5228787452803376 0.3252574989159953 0.4247425010840047 + + {I|L}PYQD{I|L}PH{I|L};{I|L}PY[AG]D{I|L}PH{I|L} 7.9136;6.6843 +;- + 333 + 1 1.099 61890.1 1.0 10468 4915 15382 HBL1_DMSO_200M_050219_2,15385 HBL1_DMSO_200M_050219_2,15385,IPYQDLPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15386 80.898 37.0 2235600.0 25 0 192240.0 + 3562 DAAAFFKSV 9 103 478.2478577894586 954.4811626457172 2 478.2477294802666 MULTI CID FTMS 0 0 0 15382 878636.3125 0.3021454457608839 -2 0.171295166015625 4 Unmodified _DAAAFFKSV_ ENSG00000065923|ENST00000616978|SLC9A7;nc|ENSG00000065923|Q96T83|SLC9A7 29.84058131909904 0.1515068451768857 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}HPKV 8 5 + 39.659 0.0 0.0 4.155 4.155 68.421 0.0 0.0 0.0 17.297414734659704 4.247673207481824 4.247673207481824 2.04119982655925 0 0.805462187404089 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}HPKV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}KSV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}SKV 4.155;3.9411;3.8396 -;-;- 281 + 1 1.099 66528.5 1.0 10469 4915 15382 HBL1_DMSO_200M_050219_2,15386 HBL1_DMSO_200M_050219_2,15386,DAAAFFKSV False True DAAAFFKSV 80.898025 478.247729480267 53851644.0 15382.0 nc|ENSG00000065923|Q96T83|SLC9A7;;ENSG00000065923|ENST00000616978|SLC9A7 4.785882631937663 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15387 80.899 53.0 733340.0 25 0 60367.0 23714 LTTRPSESKT 10 74 560.3015854213894 1118.5886179095787 2 560.3024780154228 MULTI CID FTMS 0 0 0 15382 861525.5625 0.0063610748979098 11 -1.182586669921875 5 Unmodified _LTTRPSESKT_ ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1 13.042465956692816 0.6287021003332052 4 [VP]S{[MG]|[TS]}V{I|L}T 8 7 21.877 0.0 0.0 1.9557 0.0 0.0 0.0 331.14553864616 331.14553864616 7.782825966510465 0.0 0.0 0.0 0 0.0 0.619788758288394 0.5 0.0 [VP]S{[MG]|[TS]}V{I|L}T 1.9557 - 98 1 1.099 35187.7 1.0 10470 4915 15382 HBL1_DMSO_200M_050219_2,15387 HBL1_DMSO_200M_050219_2,15387,LTTRPSESKT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15388 80.901 69.0 880520.0 25 0 89909.0 21853 LPPEIVFKP 9 83 520.3138957231034 1038.6132385130068 2 520.3152343630791 MULTI CID FTMS 0 0 0 15382 729112.3125 0.9053241529724888 2 -0.2315216064453125 6 Unmodified _LPPEIVFKP_ ENSG00000105877|ENST00000409508|DNAH11 22.736283301280096 0.2418982879461534 4 {I|L}PEP{I|L}{I|L}MKV 9 5 + 71.052 0.0 0.0 6.841 6.841 94.483 0.0 0.0 0.0 24.21888064676729 11.271211393095257 11.271211393095257 71.05163080486228 0 1.6677353201839438 2.0 0.0 0.2215141619232908 {I|L}PEP{I|L}{I|L}MKV 6.841 - 516 + 1 1.099 58665.8 1.0 10471 4915 15382 HBL1_DMSO_200M_050219_2,15388 HBL1_DMSO_200M_050219_2,15388,LPPEIVFKP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15389 80.902 57.0 936320.0 25 0 130730.0 + 36637 TATMHILVV 9 85 492.78097122030846 983.5473895074168 2 492.7811462283134 MULTI CID FTMS 0 0 0 15382 664734.5625 0.4585384287063104 -1 0.0804824829101562 7 Unmodified _TATMHILVV_ ENSG00000164880|ENST00000404767|INTS1;ENST00000468115.1_1_7:1523234-1533501:-|nuORF 36.04419817259434 0.0971720506436186 4 [H{I|L}]MT{I|L}ATVV 9 6 + 31.749 0.0 0.0 3.228 3.228 71.433 0.0 0.0 0.0 2.676062401770313 17.76979068265725 2.676062401770313 5.91251590079672 0 0.6677353201839438 0.0 0.0 0.0 [H{I|L}]MT{I|L}ATVV;[H{I|L}]MT[TA]{I|L}VV;[{I|L}P]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}{I|L}VV;[H{I|L}]{I|L}[MT]ATVV;[{I|L}P]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[CP]|[EA]}VV;{I|L}{I|L}H[MT]ATVV 3.228;2.6269;2.3493;1.4021;1.2516;1.096 -;-;-;-;-;- 154 1 1.099 47545.7 1.0 10472 4915 15382 HBL1_DMSO_200M_050219_2,15389 HBL1_DMSO_200M_050219_2,15389,TATMHILVV True True TATMHILVV 80.902498 492.781146228313 24190734.0 15382.0 ENST00000468115.1_1_7:1523234-1533501:-|nuORF;;ENSG00000164880|ENST00000404767|INTS1 6.703390280405681 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15390 80.904 74.0 376520.0 25 0 40089.0 -1 GVIMSVNNV 9 61 316.83269723585227 947.4762623077568 3 316.8324157595634 MULTI CID FTMS 0 0 0 15382 632706.0625 0.6669261253578784 -1 0.0804824829101562 8 Oxidation (M) _GVIM(Oxidation (M))SVNNV_ ENST00000539690.1_1_12:121163604-121175022:+|nuORF 8.155526934196011 0.6299788542272896 4 [VG]VA 4 -1 38.594 0.0 0.0 4.0734 0.0 0.0 0.0 618.2584826237875 618.2584826237875 25.09955584830828 0.0 0.0 0.0 0 0.2396518287104437 2.0 0.0 0.0 [VG]VA 4.0734 - 27 + 1 1.099 30123.0 1.0 10473 4915 15382 HBL1_DMSO_200M_050219_2,15390 HBL1_DMSO_200M_050219_2,15390,GVIMSVNNV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15391 80.907 158.0 396860.0 25 0 81750.0 + -1 MLKSSETLLY 10 92 600.810906164455 1199.60725939571 2 600.8113281130791 MULTI CID FTMS 0 0 0 15382 477032.25 0.6166617328445186 2 -0.2315216064453125 9 Oxidation (M) _M(Oxidation (M))LKSSETLLY_ REV__ENSG00000114744|ENST00000473414|COMMD2;REV__ENST00000463077.5_1_3:149459310-149470177:-|nuORF;REV__ENST00000469896.1_1_3:149468461-149470237:-|nuORF;REV__nc|ENSG00000114744|Q86X83-2|COMMD2 19.256988751693697 0.5244284437930726 4 {I|L}VS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L} 7 -1 40.762 0.0 0.0 3.398 0.0 0.0 312.1681196845887 0.0 312.1681196845887 0.0 31.00838169881687 0.0 0.0 0 0.3807196863200844 0.0 0.6989700043360187 0.0 {I|L}VS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L} 3.398 - 501 + 1 1.099 50522.2 1.0 10474 4915 15382 HBL1_DMSO_200M_050219_2,15391 HBL1_DMSO_200M_050219_2,15391,MLKSSETLLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15392 80.91 116.0 593990.0 25 0 38534.0 -1 VGPSAEEKM 9 90 482.2280429004821 962.4415328677642 2 482.7301818728447 MULTI CID FTMS 0 0 0 15382 407278.71875 1.0 0 0.0 10 Oxidation (M) _VGPSAEEKM(Oxidation (M))_ ENSG00000107140|ENST00000336395|TESK1 7.910154910731844 0.6385446671287552 4 [SG]AGA 5 -1 16.198 0.0 0.0 1.683 0.0 0.0 0.0 616.2574274203243 616.2574274203243 4.93882771791494 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [SG]AGA 1.683 - 128 + 1 1.099 57389.9 1.0 10475 4915 15382 HBL1_DMSO_200M_050219_2,15392 HBL1_DMSO_200M_050219_2,15392,VGPSAEEKM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15393 80.919 519.0 235070.0 25 0 17970.0 + 30834 RIKDEFQLL 9 143 581.335105009456 1160.655657085712 2 581.3351928591728 MULTI CID FTMS 0 0 0 15382 342300.90625 0.3495477297838794 2 -0.2315216064453125 11 Unmodified _RIKDEFQLL_ ENSG00000104964|ENST00000327141|TLE5;ENST00000585782.1_1_19:3057505-3062198:-|nuORF;ENST00000586003.1_1_19:3061156-3062198:-|nuORF;nc|ENSG00000104964|Q08117-2|TLE5 51.629811660486645 0.0367964933207742 4 [R{I|L}]KDE{M(Oxidation (M))|F}Q{I|L}{I|L} 9 0 + 54.025 0.0 0.0 4.6547 4.6547 68.804 0.0 0.0 0.0 4.762036441594191 39.03720958383822 4.762036441594191 1.2641002136337676 0 0.5 0.0 0.6237125054200234 0.6747425010840047 + + [R{I|L}]KDE{M(Oxidation (M))|F}Q{I|L}{I|L};[R{I|L}]KDEQ{M(Oxidation (M))|F}{I|L}{I|L};[Q{I|L}]{I|L}{[SA]|[TG]}E{M(Oxidation (M))|F}Q{I|L}{I|L};[Q{I|L}]{I|L}{[SA]|[TG]}EQ{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{M(Oxidation (M))|F}[AG]{I|L}{I|L};[R{I|L}]KDE[AG]{M(Oxidation (M))|F}{I|L}{I|L};[R{I|L}]KDE{I|L}Q{M(Oxidation (M))|F}{I|L};[Q{I|L}]{I|L}{[WT]|[RM]}{M(Oxidation (M))|F}Q{I|L}{I|L};[R{I|L}]KDEQ{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{I|L}{[WT]|[RM]}Q{M(Oxidation (M))|F}{I|L}{I|L} 4.6547;4.5458;4.0453;3.9364;3.8614;3.7525;3.5212;3.4825;3.404;3.3736 +;-;-;-;-;-;-;-;-;- + 1676 1 1.099 94151.8 1.0 10476 4915 15382 HBL1_DMSO_200M_050219_2,15393 HBL1_DMSO_200M_050219_2,15393,RIKDEFQLL True True RIKDEFQLL 80.918913 581.335192859173 17224908.0 15382.0 ENST00000586003.1_1_19:3061156-3062198:-|nuORF;;ENST00000585782.1_1_19:3057505-3062198:-|nuORF;;ENSG00000104964|ENST00000327141|TLE5;;nc|ENSG00000104964|Q08117-2|TLE5 5.664699554443359 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15394 80.922 155.0 1710800.0 25 0 851590.0 + -1 IFQVAQEL 8 82 948.4853188026458 0 948.4844848513604 PEAK CID FTMS 0 0 0 15382 274040.71875 0.5148522309492469 1 -0.108673095703125 12 ENST00000602825.5_1_1:231664421-231690428:+|nuORF;ENST00000476913.1_1_1:231665086-231678380:+|nuORF;ENSG00000116918|ENST00000366639|TSNAX 4 MEEAVQ 6 -1 41.024 0.0 0.0 2.1649 0.0 0.0 947.4744173773884 257.1305256117569 1204.6049429891457 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.7742275032520141 MEEAVQ 2.1649 - 3335 + 1 1.099 173245.1 1.0 10477 4915 15382 HBL1_DMSO_200M_050219_2,15394 HBL1_DMSO_200M_050219_2,15394, False False IFQVAQEL 80.92201 948.48448485136 8547008.0 15382.0 ENST00000602825.5_1_1:231664421-231690428:+|nuORF;;ENST00000476913.1_1_1:231665086-231678380:+|nuORF;;ENSG00000116918|ENST00000366639|TSNAX 0.7048371036847433 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15395 80.932 557.0 367440.0 25 0 24124.0 -1 0 142 620.6406626931131 1858.9001586795391 3 620.6407348513603 MULTI CID FTMS 0 0 0 15382 290667.5625 0.7658963207281965 1 -0.108673095703125 13 4 {M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SHGS[QA]VK 14 -1 69.502 0.0 0.0 3.7389 0.0 0.0 290.1184751617175 0.0 290.1184751617175 0.0 16.037647875283106 0.0 0.0 0 0.3252574989159953 0.0 0.8494850021680094 0.7134679910804405 {M(Oxidation (M))|F}PH{M(Oxidation (M))|F}D{I|L}SHGS[QA]VK 3.7389 - 8372 + 1 1.099 153873.0 1.0 10478 4915 15382 HBL1_DMSO_200M_050219_2,15395 HBL1_DMSO_200M_050219_2,15395, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15396 80.937 279.0 357640.0 25 0 45424.0 + 34992 SQMNAVVYL 9 141 512.7610406396165 1023.5075283460328 2 512.7617675662041 MULTI CID FTMS 0 0 0 15382 253955.609375 1.0 0 0.0 14 Unmodified _SQMNAVVYL_ ENSG00000153922|ENST00000614616|CHD1;nc|ENSG00000153922|O14646-2|CHD1 29.081581746732265 0.1611639662936252 4 {[VA]|[{I|L}G]}N[C(Carbamidomethyl (C))S]VVY{I|L} 9 5 + 26.732 0.0 0.0 2.6118 2.6118 67.842 0.0 0.0 0.0 3.961792614404253 6.879617791072832 3.961792614404253 3.961792614404253 0 0.2742275032520141 1.154901959985743 0.6861818737241735 0.7302046884880937 {[VA]|[{I|L}G]}N[C(Carbamidomethyl (C))S]VVY{I|L};{[QS]|[NT]}[C(Carbamidomethyl (C))R]VVY{I|L};{[VA]|[{I|L}G]}NM{[QS]|[NT]}VY{I|L};[MN]A{[QS]|[NT]}VVY{I|L};{[SA]|[TG]}G[C(Carbamidomethyl (C))R]VVY{I|L};[MN]AV{[QS]|[NT]}VY{I|L};{[VA]|[{I|L}G]}NM[WK]Y{I|L};{[VA]|[{I|L}G]}GGM{[QS]|[NT]}VY{I|L};{[VA]|[{I|L}G]}GG[C(Carbamidomethyl (C))S]VVY{I|L};[Q{I|L}]{[CA]|SS}{[QS]|[NT]}VY{I|L} 2.6118;2.2247;1.8983;1.8401;1.3613;1.1267;1.0611;0.99866;0.99866;0.80782 -;-;-;-;-;-;-;-;-;- 355 1 1.099 79214.4 1.0 10479 4915 15382 HBL1_DMSO_200M_050219_2,15396 HBL1_DMSO_200M_050219_2,15396,SQMNAVVYL False True SQMNAVVYL 80.93694 512.761767566204 2052563.75 15382.0 ENSG00000153922|ENST00000614616|CHD1;;nc|ENSG00000153922|O14646-2|CHD1 0.1271796201666196 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15397 80.948 617.0 219370.0 25 0 16565.0 37568 TLIHTATMQV 10 160 557.8008132289892 1113.5870735247784 2 557.8003417849541 MULTI CID FTMS 0 0 0 15382 227342.578125 1.0 0 0.0 15 Unmodified _TLIHTATMQV_ ENST00000484556.1_1_6:30866836-30867070:+|nuORF 37.97399986684836 0.1789611706409123 4 {I|L}P[QP]T[WP]Y{I|L} 9 9 + 39.437 0.0 0.0 3.5415 3.5415 63.122 0.0 0.0 0.0 7.736257612663152 0.3521248035406188 0.3521248035406188 0.3721456863576406 0 0.7887254899964358 1.5228787452803376 0.0 0.0 {I|L}P[QP]T[WP]Y{I|L};{I|L}P[QP]D{I|L}A{M(Oxidation (M))|F}T{I|L};{I|L}P[QP]D{I|L}VW{M(Oxidation (M))|F};{I|L}P[QP]T{[{M(Oxidation (M))|F}C]|[YS]}{I|L}PV;{I|L}P[QP][W{M(Oxidation (M))|F}]{I|L}T{I|L};{I|L}P[QP]D{[MS]|[{M(Oxidation (M))|F}A]}{I|L}T{I|L};{I|L}P[QP]D{I|L}[MT]S{I|L};{I|L}P[QP]TH[HA]T{I|L};{I|L}P[QP]D{I|L}[MT]TV;{I|L}P[QP]R[YN]N{I|L} 3.5415;3.508;3.4767;2.989;2.7198;2.6787;2.6683;2.6621;2.6311;2.6269 -;-;-;-;-;-;-;-;-;- 2175 + 1 1.099 106164.4 1.0 10480 4915 15382 HBL1_DMSO_200M_050219_2,15397 HBL1_DMSO_200M_050219_2,15397,TLIHTATMQV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15398 80.959 670.0 165860.0 25 0 13196.0 -1 0 99 990.5295713164652 0 990.9295532107352 PEAK CID FTMS 0 0 0 -1 0 16 4 M{I|L}Y{I|L}AAT 7 -1 35.81 0.0 0.0 1.8095 0.0 0.0 989.5514389202368 223.0725496881469 1212.6239886083838 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2145591924310528 0.0 M{I|L}Y{I|L}AAT 1.8095 - 857 + 1 1.099 76658.6 1.0 10481 4915 15382 HBL1_DMSO_200M_050219_2,15398 HBL1_DMSO_200M_050219_2,15398, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15399 80.964 157.0 358230.0 25 0 34554.0 + + -1 SVVDLTCRL 9 100 503.2793035367612 1004.5440541403224 2 503.2748901247978 MULTI CID FTMS 0 0 0 15382 189754.3125 0.0851445011812269 9 -0.9855499267578124 17 Carbamidomethyl (C) _SVLAVMC(Carbamidomethyl (C))LI_ ENSG00000105679|ENST00000222286|GAPDHS;nc|ENSG00000111640|P04406-2|GAPDH;ENSG00000111640|ENST00000229239|GAPDH;ENST00000403475.2_1_6:84102811-84103060:+|nuORF;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 13.50788311687929 0.4710407108020397 4 [VS]VD{I|L}E 6 -1 43.209 0.0 0.0 4.3014 0.0 0.0 0.0 359.18515955142817 359.18515955142817 11.52697400533215 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]VD{I|L}E 4.3014 - 153 + 1 1.099 49612.1 1.0 10482 4915 15382 HBL1_DMSO_200M_050219_2,15399 HBL1_DMSO_200M_050219_2,15399,SVLAVMCLI False False SVVDLTCRL 80.963711 503.274890124798 4557883.0 15382.0 ENSG00000105679|ENST00000222286|GAPDHS;;nc|ENSG00000111640|P04406-2|GAPDH;;ENSG00000111640|ENST00000229239|GAPDH;;ENST00000403475.2_1_6:84102811-84103060:+|nuORF;;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 0.4615145077308019 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15400 80.974 616.0 174060.0 25 0 14821.0 + 38290 TQEEPDSLLEV 11 137 630.3025870949971 1258.590621256794 2 630.3063232302666 MULTI CID FTMS 0 0 0 15382 164315.59375 1.0 0 0.0 18 Unmodified _TQEEPDSLLEV_ chr19:17543433-17546686|45|45.27|0.54|6.38|+|ENST00000599124|NIBAN3,NIBAN3;chr19:17546797-17549455|45|19.44|0.22|6.49|+|ENST00000600519|NIBAN3,NIBAN3;chr19:17546797-17551786|45|44.04|0.49|6.48|+|ENST00000600871|NIBAN3,NIBAN3;chr19:17549527-17553313|46|34.41|0.39|6.48|+|ENST00000601861|NIBAN3,NIBAN3;ENSG00000167483|ENST00000599164|NIBAN3;nc|ENSG00000167483|Q86XR2-2|NIBAN3;nc|ENSG00000167483|Q86XR2-3|NIBAN3;nc|ENSG00000167483|Q86XR2-4|NIBAN3;nc|ENSG00000167483|Q86XR2-5|NIBAN3;nc|ENSG00000167483|Q86XR2-7|NIBAN3;nc|ENSG00000167483|Q86XR2|NIBAN3 51.487983226225225 0.1093896055713593 4 [{M(Oxidation (M))|F}V]{I|L}{I|L}S[DP]EE[NP] 11 10 + 50.708 0.0 0.0 4.029 4.029 79.224 0.0 0.0 0.0 26.165702946822982 2.340610492820666 2.340610492820666 10.680479018406132 0 0.566901560044258 0.9208187539523752 1.089136830878453 0.25 [{M(Oxidation (M))|F}V]{I|L}{I|L}S[DP]EE[NP];[{M(Oxidation (M))|F}V]{I|L}{I|L}[C(Carbamidomethyl (C))M]T[YN]V;{NN|[MP]|[D{I|L}]|[EV]}[PS]TQEE{I|L}EV;[DP]SST[DP]S{I|L}{I|L}EV;{[TV]|[{I|L}S]}PDTQEE{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[VG]EQEE{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[PS]{I|L}E[MN]{I|L}EV;[VG]DDT[DP]S{I|L}{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}{I|L}S[DP]E[DG][PA];{NN|[MP]|[D{I|L}]|[EV]}[PS]{I|L}[MN]E{I|L}EV 4.029;3.1803;3.1569;3.0568;2.8802;2.7226;2.6623;2.6231;2.6057;2.5994 -;-;-;-;-;-;-;-;-;- 2488 + 1 1.099 88420.6 1.0 10483 4915 15382 HBL1_DMSO_200M_050219_2,15400 HBL1_DMSO_200M_050219_2,15400,TQEEPDSLLEV True True TQEEPDSLLEV 80.97449 630.306323230267 1950529.25 15382.0 chr19:17546797-17549455|45|19.44|0.22|6.49|+|ENST00000600519|NIBAN3,NIBAN3;;chr19:17549527-17553313|46|34.41|0.39|6.48|+|ENST00000601861|NIBAN3,NIBAN3;;nc|ENSG00000167483|Q86XR2-3|NIBAN3;;nc|ENSG00000167483|Q86XR2-5|NIBAN3;;nc|ENSG00000167483|Q86XR2-4|NIBAN3;;chr19:17532388-17537376|29|42.86|0.46|6.53|+|2|NIBAN3,NIBAN3|1;;chr19:17537259-17537376|18|15.44|0.11|7.17|+|2|None,NIBAN3|1;;ENSG00000167483|ENST00000599164|NIBAN3;;chr19:17533925-17537376|28|19.04|0.17|6.8|+|2|TE_info:MER20,MER20_dup15208,hAT-Charlie,DNA,donor,-,17533729,17533925|None,NIBAN3|2;;chr19:17546797-17551786|45|44.04|0.49|6.48|+|ENST00000600871|NIBAN3,NIBAN3;;nc|ENSG00000167483|Q86XR2|NIBAN3;;nc|ENSG00000167483|Q86XR2-2|NIBAN3;;nc|ENSG00000167483|Q86XR2-7|NIBAN3;;chr19:17543433-17546686|45|45.27|0.54|6.38|+|ENST00000599124|NIBAN3,NIBAN3 5.486393690109253 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15401 80.985 625.0 334970.0 25 0 22739.0 -1 LPKCMTKEL 9 179 568.2978247350383 1134.5810965368764 2 568.2986938357353 MULTI CID FTMS 0 0 0 15382 166784.84375 0.0583018799083619 9 -0.9855499267578124 19 Carbamidomethyl (C),Oxidation (M) _LPKC(Carbamidomethyl (C))M(Oxidation (M))TKEL_ ENSG00000196267|ENST00000682614|ZNF836 16.942295170755138 0.3780752226737986 4 [{I|L}P][TA]G{M(Oxidation (M))|F}{I|L}T{I|L} 9 -1 26.607 0.0 0.0 2.3451 0.0 0.0 0.0 218.06147918752012 218.06147918752012 6.913859011144368 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.7302046884880937 0.0 [{I|L}P][TA]G{M(Oxidation (M))|F}{I|L}T{I|L} 2.3451 - 3332 1 1.099 159049.1 1.0 10484 4915 15382 HBL1_DMSO_200M_050219_2,15401 HBL1_DMSO_200M_050219_2,15401,LPKCMTKEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15402 80.998 754.0 135210.0 25 0 15302.0 + 7591 EILRLSSCKL 10 131 387.8923175189319 1160.6551231569958 3 387.8924743533134 MULTI CID FTMS 0 0 0 15382 160678.515625 0.3918427599953878 2 -0.2315216064453125 20 Unmodified _EILRLSSCKL_ REV__ENSG00000143278|ENST00000367412|F13B 22.736283301280096 0.4578556481593033 4 M 1 -1 14.604 0.0 0.0 1.2583 0.0 0.0 1011.6034854390256 0.0 1011.6034854390256 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.2583 - 251 + 1 1.099 84951.0 1.0 10485 4915 15382 HBL1_DMSO_200M_050219_2,15402 HBL1_DMSO_200M_050219_2,15402,EILRLSSCKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15404 81.003 3.7 11156000.0 25 0 1522300.0 + 12688 GVLPNIQAV 9 62 455.771210605697 909.527868278194 2 455.7715637087822 MULTI CID FTMS 0 0 0 15403 14743224.0 0.4663632362428099 3 -0.3638992309570312 1 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 30.22481116460888 0.1466181017706357 4 [VG]APQA 6 4 34.09 0.0 0.0 3.7482 0.0 0.0 0.0 383.2280995616504 383.2280995616504 16.923487412610353 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.4247425010840047 [VG]APQA 3.7482 - 162 1 1.085 38040.0 1.0 10486 4916 15403 HBL1_DMSO_200M_050219_2,15404 HBL1_DMSO_200M_050219_2,15404,GVLPNIQAV False True GVLPNIQAV 81.002727 455.771563708782 1357491712.0 15403.0 ENSG00000196747|ENST00000358739|H2AC13;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000276903|ENST00000613174|H2AC16;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000274997|ENST00000377459|H2AC12;;ENSG00000184270|ENST00000331128|H2AC21;;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;;ENSG00000180573|ENST00000377791|H2AC6;;nc|ENSG00000246705|Q9BTM1-2|H2AJ;;ENSG00000246705|ENST00000544848|H2AJ 6.57578166325887 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15405 81.004 5.3 8891200.0 25 0 1305200.0 -1 ALMAAPLSL 9 70 451.75274496202985 901.4909369908596 2 451.7530700564384 MULTI CID FTMS 0 0 0 15403 9967026.0 0.7674367732536316 1 -0.1228485107421875 2 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 32.116972079565 0.1225432171549407 4 [{I|L}A]{M(Oxidation (M))|F}PAS 6 -1 49.13 0.0 0.0 5.4498 0.0 0.0 0.0 312.19307009540154 312.19307009540154 29.877203139966326 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS 5.4498 - 181 1 1.085 46548.6 1.0 10487 4916 15403 HBL1_DMSO_200M_050219_2,15405 HBL1_DMSO_200M_050219_2,15405,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15406 81.005 23.0 2450000.0 25 0 160480.0 + 34566 SPFPDIPKV 9 88 500.2790378955102 998.5435228578204 2 500.2794677615166 MULTI CID FTMS 0 0 0 15403 1432334.875 0.1316600551758294 3 -0.3638992309570312 3 Unmodified _SPFPDIPKV_ ENSG00000102699|ENST00000381989|PARP4;ENST00000435945.1_1_Y:28761086-28769767:-|nuORF;ENST00000446672.2_1_13:19955792-19968894:+|nuORF 26.268140514670165 0.1969607489560049 4 {I|L}DPAAGN 7 8 32.963 0.0 0.0 3.3012 0.0 0.0 342.227358433844 0.0 342.227358433844 0.0 15.472287753157511 0.0 0.0 0 1.1237125054200234 0.0 0.0 0.0 {I|L}DPAAGN 3.3012 - 240 1 1.085 48469.9 1.0 10488 4916 15403 HBL1_DMSO_200M_050219_2,15406 HBL1_DMSO_200M_050219_2,15406,SPFPDIPKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15407 81.007 56.0 1150500.0 25 0 88964.0 + 4266 DAPVALVVHM 10 99 526.2841237750652 1050.5536946169302 2 526.2843505740166 MULTI CID FTMS 0 0 0 15403 943809.375 0.1813689501286461 3 -0.3638992309570312 4 Unmodified _DAPVALVVHM_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000487229.6_1_17:12905763-12906899:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 44.40701690623563 0.1129771813061863 4 {[DA]|[EG]}PVA{I|L}VV[HM] 10 0 + 67.017 0.0 0.0 6.3792 6.3792 91.475 0.0 0.0 0.0 21.567022752910304 7.269987279362624 7.269987279362624 28.120465983252885 0 0.6382104921644451 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}PVA{I|L}VV[HM];{[DA]|[EG]}PVA{[ET]|[MV]}[HV]{I|L};{I|L}{I|L}G[WQ]AV[HQ];[{I|L}A]G{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}AV[HQ];[{I|L}A]{[WN]|[YH]}{I|L}AV[HQ];[Q{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}AV[HQ];{I|L}{I|L}GVH[{M(Oxidation (M))|F}T][HQ];{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}{I|L}AV[HQ];[{I|L}A]V[WQ]AV[HQ];[{I|L}A]VVH[{M(Oxidation (M))|F}T][HQ] 6.3792;3.7025;2.8648;2.4496;2.228;2.1346;2.1241;1.7928;1.7738;1.0331 +;-;-;-;-;-;-;-;-;- + 387 + 1 1.085 53990.7 1.0 10489 4916 15403 HBL1_DMSO_200M_050219_2,15407 HBL1_DMSO_200M_050219_2,15407,DAPVALVVHM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15408 81.008 35.0 1542200.0 25 0 138960.0 + 4444 DAWLRAQVI 9 99 536.3007124261787 1070.5868719191574 2 536.3016845583916 MULTI CID FTMS 0 0 0 15403 761986.6875 0.9969698684470696 1 -0.1228485107421875 5 Unmodified _DAWLRAQVI_ ENSG00000196116|ENST00000355295|TDRD7;nc|ENSG00000196116|Q8NHU6-2|TDRD7 43.77239144664712 0.0547478964384323 4 {[DA]|[EG]}W{I|L}[KQ][TP]{I|L} 9 4 + 38.936 0.0 0.0 3.6368 3.6368 79.462 0.0 0.0 0.0 -1.790396629864475 9.15423722065669 -1.790396629864475 15.456801933636308 0 0.6861818737241735 1.3979400086720375 0.0 0.2742275032520141 {[DA]|[EG]}W{I|L}[KQ][TP]{I|L};[Q{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}WWV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KP]WWV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}N[R{I|L}]DVV{I|L};[Q{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}W{[DA]|[EG]}V{I|L};[Q{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}{[DA]|[EG]}WV{I|L};[Q{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}WVW{I|L};[Q{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}DVV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KP]{[DA]|[EG]}WV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KP]W{[DA]|[EG]}V{I|L} 3.6368;2.1931;1.9239;1.4043;1.3279;1.3279;1.1624;1.0945;1.0587;1.0587 -;-;-;-;-;-;-;-;-;- 268 + 1 1.085 48412.6 1.0 10490 4916 15403 HBL1_DMSO_200M_050219_2,15408 HBL1_DMSO_200M_050219_2,15408,DAWLRAQVI True True DAWLRAQVI 81.007698 536.301684558392 8376894.5 15403.0 ENSG00000196116|ENST00000355295|TDRD7;;nc|ENSG00000196116|Q8NHU6-2|TDRD7 5.838795026143392 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15409 81.009 68.0 850430.0 25 0 54999.0 -1 FMNGACSPSL 10 103 542.2354551656142 1082.4563573980283 2 542.2361328005791 MULTI CID FTMS 0 0 0 15403 758447.3125 0.62961638776604 3 -0.3638992309570312 6 Carbamidomethyl (C) _FMNGAC(Carbamidomethyl (C))SPSL_ ENSG00000135093|ENST00000257548|USP30 24.99096001346401 0.4071966087057876 4 PPTV 4 -1 37.229 0.0 0.0 3.4393 0.0 0.0 670.2230363678858 0.0 670.2230363678858 0.0 3.3547064036788825 0.0 0.0 0 1.274227503252014 0.0 0.6861818737241735 0.0 PPTV 3.4393 - 360 + 1 1.085 53802.5 1.0 10491 4916 15403 HBL1_DMSO_200M_050219_2,15409 HBL1_DMSO_200M_050219_2,15409,FMNGACSPSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15410 81.012 125.0 722510.0 25 0 118620.0 + 16508 KAMDDTFYL 9 121 552.25763901121 1102.50072508922 2 552.2578613162041 MULTI CID FTMS 0 0 0 15403 572073.625 0.969707634543126 -1 0.108673095703125 7 Unmodified _KAMDDTFYL_ ENSG00000167136|ENST00000372642|ENDOG 36.506200033944 0.094635877243972 4 [NP]AYDT{M(Oxidation (M))|F}Y{I|L} 9 4 + 67.674 0.0 0.0 6.1382 6.1382 89.875 0.0 0.0 0.0 11.12704280191288 57.07803694346106 11.12704280191288 20.56547554334088 0 0.8807196863200843 0.6989700043360187 0.805462187404089 0.0 [NP]AYDT{M(Oxidation (M))|F}Y{I|L};{[TV]|[{I|L}S]}[MN]DT{M(Oxidation (M))|F}Y{I|L};[Q{I|L}]{[CT]|[{M(Oxidation (M))|F}G]}DT{M(Oxidation (M))|F}Y{I|L};{[DA]|[EG]}{[DS]|[MA]|[CV]|TT}[TA]T{M(Oxidation (M))|F}Y{I|L};[NP]AYD[DP][QA]{I|L} 6.1382;4.2729;3.6781;3.3547;2.2804 -;-;-;-;- 473 1 1.085 73298.9 1.0 10492 4916 15403 HBL1_DMSO_200M_050219_2,15410 HBL1_DMSO_200M_050219_2,15410,KAMDDTFYL True True KAMDDTFYL 81.011908 552.257861316204 5523253.0 15403.0 ENSG00000167136|ENST00000372642|ENDOG 6.14956267674764 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15411 81.013 65.0 893430.0 25 0 94697.0 + 37312 TIRYPDPLI 9 86 544.3110889334554 1086.607624933711 2 544.3145629763603 MULTI CID FTMS 0 0 0 15403 581741.3125 0.0375021144610635 7 -0.75982666015625 8 Unmodified _TIRYPDPLI_ ENSG00000198034|ENST00000316084|RPS4X;ENSG00000280969|ENST00000629237|RPS4Y2 45.69961567697781 0.0497987121815769 4 [{I|L}P][W{M(Oxidation (M))|F}]TTP{I|L}{I|L} 9 5 + 72.655 0.0 0.0 6.6864 6.6864 86.202 0.0 0.0 0.0 7.7815125038364386 16.478174818886373 7.7815125038364386 7.7815125038364386 0 1.1307196863200843 1.6989700043360187 0.8494850021680094 0.0 [{I|L}P][W{M(Oxidation (M))|F}]TTP{I|L}{I|L};[{I|L}T][WM]{I|L}TP{I|L}{I|L};[{I|L}T]RY[DP]P{I|L}{I|L};[DP][YR]{I|L}TP{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[YK][DP]P{I|L}{I|L};[{I|L}T]RY{[HG]|PP}{I|L}EV;[{I|L}P][W{M(Oxidation (M))|F}][{I|L}A]{I|L}EV;{[QN]|[E{I|L}]|[KN]}[YK]{[HG]|PP}{I|L}EV 6.6864;5.9703;4.888;4.2447;3.6906;2.3078;2.3073;1.1105 -;-;+;-;-;-;-;- + 271 1 1.085 54075.0 1.0 10493 4916 15403 HBL1_DMSO_200M_050219_2,15411 HBL1_DMSO_200M_050219_2,15411,TIRYPDPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15412 81.022 490.0 440110.0 25 0 108070.0 -1 0 119 1035.1632226589072 3102.467838576922 3 1035.834033191204 MULTI CID FTMS 0 0 0 15403 446399.4375 0.5654707111786458 2 -0.2115936279296875 9 4 RVNN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 6 -1 29.698 0.0 0.0 0.95723 0.0 0.0 2341.1095856854263 0.0 2341.1095856854263 0.0 16.994784489444967 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 RVNN{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 0.95723 - 1144 1 1.085 145125.1 1.0 10494 4916 15403 HBL1_DMSO_200M_050219_2,15412 HBL1_DMSO_200M_050219_2,15412, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15413 81.025 121.0 820760.0 25 0 51809.0 -1 0 116 881.413916772189 1760.813280611178 2 881.4168578982353 MULTI CID FTMS 0 0 0 15403 424690.21875 0.0149879881142905 -3 0.27996826171875 10 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}NQQNA{M(Oxidation (M))|F}Y 11 -1 65.359 0.0 0.0 3.7119 0.0 0.0 0.0 355.1910522578616 355.1910522578616 42.417488409023626 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 1.274227503252014 {[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}NQQNA{M(Oxidation (M))|F}Y 3.7119 - 17960 1 1.085 69863.2 1.0 10495 4916 15403 HBL1_DMSO_200M_050219_2,15413 HBL1_DMSO_200M_050219_2,15413, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15414 81.027 133.0 255580.0 25 0 50131.0 -1 TVSSMKVG 8 55 412.71340772261976 823.4122625120395 2 412.7132140994072 MULTI CID FTMS 0 0 0 15403 378123.1875 1.0 0 0.0 11 Oxidation (M) _TVSSM(Oxidation (M))KVG_ ENSG00000116711|ENST00000367466|PLA2G4A;ENST00000466600.1_1_1:186823486-186908166:+|nuORF 2.889219685676258 0.8067950007271085 4 VC 2 -1 20.969 0.0 0.0 2.5466 0.0 0.0 0.0 618.2945491460861 618.2945491460861 10.590496560389973 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VC 2.5466 - 4 + 1 1.085 33249.9 1.0 10496 4916 15403 HBL1_DMSO_200M_050219_2,15414 HBL1_DMSO_200M_050219_2,15414,TVSSMKVG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15415 81.038 578.0 360980.0 25 0 33772.0 -1 0 87 1083.1214578299885 0 1083.121997058392 PEAK CID FTMS 0 0 0 15403 326854.96875 1.0 0 0.0 12 4 AQ 2 -1 11.326 0.0 0.0 0.52332 0.0 0.0 1371.7768379238455 590.3331425535638 1962.1099804774087 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 AQ 0.52332 - 204 + 1 1.085 141652.9 1.0 10497 4916 15403 HBL1_DMSO_200M_050219_2,15415 HBL1_DMSO_200M_050219_2,15415, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15416 81.048 584.0 300660.0 25 0 13873.0 + 15293 VLYTGDFRLA 10 165 577.8424764256706 1153.6703999181411 2 577.8427001833916 MULTI CID FTMS 0 0 0 15403 235647.34375 0.2356333677458755 -2 0.1891555786132812 13 Unmodified _IPIQINVGTTV_ nc|ENSG00000152457|Q96SD1-3|DCLRE1C;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;ENSG00000152457|ENST00000378278|DCLRE1C;nc|ENSG00000152457|Q96SD1-4|DCLRE1C 56.17704186161178 0.0846604386095034 4 [{I|L}P]Q{I|L}{I|L}NVGR 9 5 50.596 0.0 0.0 4.3856 0.0 0.0 0.0 160.05768275581298 160.05768275581298 8.661968799114845 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.535666875892183 [{I|L}P]Q{I|L}{I|L}NVGR 4.3856 - 15719 1 1.085 140064.2 1.0 10498 4916 15403 HBL1_DMSO_200M_050219_2,15416 HBL1_DMSO_200M_050219_2,15416,IPIQINVGTTV True True VLYTGDFRLA 81.0478 577.842700183392 1460553.75 15403.0 nc|ENSG00000152457|Q96SD1-3|DCLRE1C;;nc|ENSG00000152457|Q96SD1-2|DCLRE1C;;ENSG00000152457|ENST00000378278|DCLRE1C;;nc|ENSG00000152457|Q96SD1-4|DCLRE1C 5.408968925476074 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15417 81.052 240.0 580220.0 25 0 39543.0 + 34475 SMLDDLRNV 9 144 531.7654623121925 1061.516371691185 2 531.7639037966728 MULTI CID FTMS 0 0 0 15403 173553.828125 0.946680749970894 -1 0.108673095703125 14 Unmodified _SMLDDLRNV_ ENSG00000160255|ENST00000652462|ITGB2;ENST00000498666.5_1_21:46314678-46340855:-|nuORF;ENST00000521987.1_1_21:46321596-46323430:-|nuORF 32.78568957990786 0.1150597335874693 4 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DD{I|L}[RN]V 9 0 + 63.434 0.0 0.0 5.9758 5.9758 87.232 0.0 0.0 0.0 43.90687774205176 10.285371682087217 10.285371682087217 11.205739312058505 0 0.7742275032520141 1.6989700043360187 0.0 0.3807196863200844 + + {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DD{I|L}[RN]V;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}DDV[RN]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}VED{I|L}[RN]V;{[MS]|[{M(Oxidation (M))|F}A]}VEDV[RN]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}VM[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[YC]|[HE]}[{I|L}A]YV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKDD{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[QA][HN]YV;{[MS]|[{M(Oxidation (M))|F}A]}{I|L}V{[WN]|[YH]}{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}VDD[RN]{I|L} 5.9758;4.9201;4.9135;3.8578;3.6853;3.5671;3.4763;3.2673;3.0041;2.8701 +;-;-;-;-;-;-;-;-;- + 1030 + 1 1.085 115571.5 1.0 10499 4916 15403 HBL1_DMSO_200M_050219_2,15417 HBL1_DMSO_200M_050219_2,15417,SMLDDLRNV True True SMLDDLRNV 81.052289 531.763903796673 1145189.75 15403.0 ENST00000521987.1_1_21:46321596-46323430:-|nuORF;;ENST00000498666.5_1_21:46314678-46340855:-|nuORF;;ENSG00000160255|ENST00000652462|ITGB2 5.786468664805095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15418 81.064 648.0 250530.0 25 0 16034.0 28798 PYPARPLPGTC 11 157 586.2980459371845 1170.581538941169 2 586.2986328005791 MULTI CID FTMS 0 0 0 15403 181954.140625 0.2152485272055244 9 -0.9820785522460938 15 Unmodified _PYPARPLPGTC_ ENSG00000135253|ENST00000610776|KCP;nc|ENSG00000135253|Q6ZWJ8-4|KCP;nc|ENSG00000135253|Q6ZWJ8|KCP 32.78568957990786 0.3235288296534633 4 YPPN{I|L}SAP{[ES]|[DT]|[{I|L}C]}P 11 8 + 85.927 0.0 0.0 7.3406 7.3406 77.279 0.0 0.0 0.0 8.526604285359653 0.4205968802726687 0.4205968802726687 0.4205968802726687 0 0.805462187404089 2.0 1.1307196863200843 0.3252574989159953 YPPN{I|L}SAP{[ES]|[DT]|[{I|L}C]}P;YPPN{I|L}SAPPC{I|L};YPPN{I|L}SPAPC{I|L};YPPN{I|L}PSAPC{I|L};YPPN{I|L}PDKPM;YPPN{I|L}SPA{[ES]|[DT]|[{I|L}C]}P;YPPN{I|L}PSA{[ES]|[DT]|[{I|L}C]}P;YPPN{I|L}SP[VG]PM;YPPN{I|L}S[RP]PM;YPPN{I|L}PS[VG]PM 7.3406;7.3046;7.1979;7.0464;6.9162;6.9086;6.7571;6.6247;6.5773;6.4733 -;-;-;-;-;-;-;-;-;- 4189 + 1 1.085 125897.6 1.0 10500 4916 15403 HBL1_DMSO_200M_050219_2,15418 HBL1_DMSO_200M_050219_2,15418,PYPARPLPGTC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15419 81.069 249.0 439690.0 25 0 52281.0 + 39038 TVTSDLLQV 9 119 488.2699766338353 974.5254003344706 2 488.2677184939384 MULTI CID FTMS 0 0 0 15403 134139.453125 0.7233161415410198 -2 0.1891555786132812 16 Unmodified _TVTSDLLQV_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 57.47134341890925 0.0274820932774257 4 {[TV]|[{I|L}S]}DTS 5 6 38.015 0.0 0.0 3.9009 0.0 0.0 0.0 468.2792204851144 468.2792204851144 14.449601405233423 0.0 0.0 0.0 0 0.0 2.0 0.9291746928241124 0.0 {[TV]|[{I|L}S]}DTS 3.9009 - 1020 1 1.085 87779.5 1.0 10501 4916 15403 HBL1_DMSO_200M_050219_2,15419 HBL1_DMSO_200M_050219_2,15419,TVTSDLLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15420 81.083 800.0 196920.0 25 0 28738.0 -1 0 167 364.74971595254254 727.4848789718851 2 364.7493163943291 MULTI CID FTMS 0 0 0 15403 155329.3125 1.0 0 0.0 17 4 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}K{I|L} 6 -1 + 47.73 0.0 0.0 6.561 6.561 82.158 0.0 0.0 0.0 21.70696227168975 4.393326938302636 4.393326938302636 4.393326938302636 0 0.1989700043360188 1.5228787452803376 0.0 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}K{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}{I|L}K 6.561;5.9571 -;- 71 + 1 1.085 125522.7 0.9399999976158142 10502 4916 15403 HBL1_DMSO_200M_050219_2,15420 HBL1_DMSO_200M_050219_2,15420, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15421 81.095 707.0 236100.0 25 0 16298.0 + 25280 MYIARQLSF 9 168 564.7959933316877 1127.5774337301752 2 564.7968627810478 MULTI CID FTMS 0 0 0 15403 146833.078125 1.0 0 0.0 18 Unmodified _MYIARQLSF_ ENSG00000064932|ENST00000361757|SBNO2;ENSG00000139697|ENST00000602398|SBNO1;ENST00000592222.5_1_19:1115804-1132196:-|nuORF;nc|ENSG00000064932|Q9Y2G9-3|SBNO2;nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-3|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1 75.5705956163825 0.0189455680524554 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}ARQ{I|L}S{M(Oxidation (M))|F} 9 0 + 70.429 0.0 0.0 6.246 6.246 78.167 0.0 0.0 0.0 2.993201395314045 2.993201395314045 2.993201395314045 2.993201395314045 0 2.1549471895720984 2.0 0.3807196863200844 0.0 + + {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}ARQ{I|L}S{M(Oxidation (M))|F};MY{I|L}[VG]RRS{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}AR[AG]{I|L}S{M(Oxidation (M))|F};MY[R{I|L}]RRS{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}AR[KA]E{M(Oxidation (M))|F};MY{I|L}A[QP][HV]G{I|L};MY{I|L}A[QP][HV]AV;[{I|L}A]RQYM{I|L}S{M(Oxidation (M))|F};[YV]A[KC][TP]{I|L}S{M(Oxidation (M))|F};[{I|L}P][DV][QP]A{I|L}E{M(Oxidation (M))|F} 6.246;5.9805;5.4294;4.9626;4.6029;4.4941;4.4238;3.3699;3.3547;3.2977 +;-;-;-;-;-;-;-;-;- + 3266 1 1.085 126523.1 1.0 10503 4916 15403 HBL1_DMSO_200M_050219_2,15421 HBL1_DMSO_200M_050219_2,15421,MYIARQLSF True True MYIARQLSF 81.095491 564.796862781048 753503.4375 15403.0 ENSG00000064932|ENST00000361757|SBNO2;;ENSG00000139697|ENST00000602398|SBNO1;;nc|ENSG00000139697|A3KN83-4|SBNO1;;nc|ENSG00000064932|Q9Y2G9-3|SBNO2;;nc|ENSG00000139697|A3KN83-3|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1;;ENST00000592222.5_1_19:1115804-1132196:-|nuORF 6.878429412841797 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15422 81.108 709.0 131120.0 25 0 23535.0 + 19354 LEPLRPPPLFE 11 115 654.3741245718159 1306.7336962104316 2 654.3731567263603 MULTI CID FTMS 0 0 0 15403 135309.75 0.4665062197424704 3 -0.3638992309570312 19 Unmodified _LEPLRPPPLFE_ REV__ENSG00000266826|ENST00000583666|IGBP1C 2.735195868890462 0.8622431031272658 4 {I|L} 1 -1 10.379 0.0 0.0 0.79424 0.0 0.0 1175.638525167266 0.0 1175.638525167266 0.0 0.3786035696905898 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.79424 + + 58 + 1 1.085 83750.5 1.0 10504 4916 15403 HBL1_DMSO_200M_050219_2,15422 HBL1_DMSO_200M_050219_2,15422,LEPLRPPPLFE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15423 81.121 709.0 140740.0 25 0 9219.1 + 25145 MQMGNEPPISL 11 134 608.7879524103158 1215.5613518874316 2 608.7869140505791 MULTI CID FTMS 0 0 0 15403 134144.109375 0.8398680741909522 2 -0.2115936279296875 20 Unmodified _MQMGNEPPISL_ ENSG00000155561|ENST00000285968|NUP205 45.739877483867886 0.1412225664835785 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DG]QMP[{I|L}P]S{I|L} 11 3 + 39.625 0.0 0.0 3.2598 3.2598 66.519 0.0 0.0 0.0 2.5128137163401902 2.5128137163401902 2.5128137163401902 2.5128137163401902 0 1.6237125054200234 0.0 0.3494850021680094 1.620371515030528 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DG]QMP[{I|L}P]S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}P]PMQE{[{M(Oxidation (M))|F}H]|[RQ]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}M{[WN]|[YH]}P[{I|L}P]S{I|L};{[QG]|[NA]}[MD]QMP[{I|L}P]S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}P]PM[AG]E{[{M(Oxidation (M))|F}H]|[RQ]};{[QD]|[EN]|[WG]|[KD]|[RS]}{[MG]|[TS]}QMP[{I|L}P]S{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))R]MP[{I|L}P]S{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}Q{[MG]|[TS]}MP[{I|L}P]S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PE{[{M(Oxidation (M))|F}H]|[RQ]};[NP]EGM{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[{I|L}P]S{I|L} 3.2598;3.053;2.5726;2.4948;2.2991;2.2792;2.0364;1.7207;0.54155;0.21073 -;-;-;-;-;-;-;-;-;- 412 1 1.085 77711.8 1.0 10505 4916 15403 HBL1_DMSO_200M_050219_2,15423 HBL1_DMSO_200M_050219_2,15423,MQMGNEPPISL False True MQMGNEPPISL 81.121301 608.786914050579 1874665.125 15403.0 ENSG00000155561|ENST00000285968|NUP205 6.070269266764323 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15425 81.126 7.2 8462100.0 25 0 745490.0 + 44940 YPPWPGKIV 9 78 528.7980860103809 1055.5816190875616 2 528.7977783083916 MULTI CID FTMS 0 0 0 15424 7815811.0 0.6854864554388824 -3 0.3120040893554687 1 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 42.09456458481378 0.0639583784996157 4 YPPWP[KG]{I|L}V 9 0 + 58.478 0.0 0.0 5.5398 5.5398 88.78 0.0 0.0 0.0 34.25250945692483 2.948719476111208 2.948719476111208 43.29766987853148 0 0.805462187404089 2.0 0.0 0.0 + + YPPWP[KG]{I|L}V;[KG]P{I|L}[R{M(Oxidation (M))|F}]P{[QN]|[E{I|L}]|[KN]};Y[{I|L}T]{I|L}[KG]P[HQ];Y[{I|L}T]{I|L}P[KG][HQ] 5.5398;1.4381;1.0024;0.88402 +;-;-;- + 202 + 1 1.081 56029.3 1.0 10506 4917 15424 HBL1_DMSO_200M_050219_2,15425 HBL1_DMSO_200M_050219_2,15425,YPPWPGKIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15426 81.127 58.0 1131700.0 25 0 206820.0 + 6562 EALPVKLI 8 86 441.7864763685225 881.558399803845 2 441.7867004275322 MULTI CID FTMS 0 0 0 15424 794918.9375 0.3189299461123941 2 -0.2410507202148437 2 Unmodified _EALPVKLI_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;nc|ENSG00000171848|P31350-2|RRM2 26.34127834903884 0.4900704351052977 4 [VP]K{I|L} 4 4 19.965 0.0 0.0 2.2648 0.0 0.0 0.0 441.2339975182688 441.2339975182688 7.201184835616026 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 + [VP]K{I|L} 2.2648 + + 73 1 1.081 58092.9 1.0 10507 4917 15424 HBL1_DMSO_200M_050219_2,15426 HBL1_DMSO_200M_050219_2,15426,EALPVKLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15427 81.128 36.0 2251700.0 25 0 210940.0 + 40991 AYNFPVTAM 9 78 507.31240759346935 1012.6102622537388 2 507.3127624392509 MULTI CID FTMS 0 0 0 15424 1788941.25 0.1061469372250487 -2 0.2315216064453125 3 Unmodified _VMAPRTLLL_ nc|ENSG00000141076|Q969X6-3|UTP4;ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4 36.506200033944 0.094635877243972 4 VMA 3 6 54.693 0.0 0.0 5.4012 0.0 0.0 0.0 708.4428753655542 708.4428753655542 12.583018898013805 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + VMA 5.4012 + + 231 + 1 1.081 67668.8 1.0 10508 4917 15424 HBL1_DMSO_200M_050219_2,15427 HBL1_DMSO_200M_050219_2,15427,VMAPRTLLL True True AYNFPVTAM 81.128209 507.312762439251 8771333.0 15424.0 nc|ENSG00000141076|Q969X6-3|UTP4;;ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 5.6249739329020185 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15428 81.129 45.0 1637200.0 25 0 291040.0 + 1586 ALLFTSWS 8 68 462.7437540417929 923.4729551503858 2 462.7439758181572 MULTI CID FTMS 0 0 0 15424 1426995.25 0.5409739876701496 3 -0.33123779296875 4 Unmodified _ALLFTSWS_ REV__ENSG00000065923|ENST00000616978|SLC9A7;REV__ENSG00000198689|ENST00000630721|SLC9A6;REV__ENST00000554295.1_1_12:98849015-98849897:-|nuORF;REV__nc|ENSG00000065923|Q96T83|SLC9A7;REV__nc|ENSG00000198689|Q92581-1|SLC9A6;REV__nc|ENSG00000198689|Q92581-3|SLC9A6;REV__nc|ENSG00000198689|Q92581|SLC9A6 13.50788311687929 0.7113601687236069 4 [{I|L}A]P 3 -1 34.705 0.0 0.0 3.7581 0.0 0.0 0.0 639.277332985995 639.277332985995 22.23074980804633 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P 3.7581 - 21 + 1 1.081 59712.7 1.0 10509 4917 15424 HBL1_DMSO_200M_050219_2,15428 HBL1_DMSO_200M_050219_2,15428,ALLFTSWS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15429 81.131 42.0 1951100.0 25 0 291670.0 + 9218 FGIDLDTRV 9 72 518.2766741301873 1034.5387953271745 2 518.2775146365166 MULTI CID FTMS 0 0 0 15424 1272255.625 0.4369385945578933 -1 0.1228485107421875 5 Unmodified _FGIDLDTRV_ ENSG00000033050|ENST00000287844|ABCF2;ENST00000465687.1_1_3:88367275-88367665:+|nuORF;nc|ENSG00000285292|Q9UG63-2|ABCF2 34.93206674587334 0.1032771302489716 4 {M(Oxidation (M))|F}G{I|L}D{I|L}DVTR 9 2 + 74.875 0.0 0.0 7.2375 7.2375 84.063 0.0 0.0 0.0 50.69344504429935 3.054169578177337 3.054169578177337 4.203103093438969 0 1.3494850021680094 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}G{I|L}D{I|L}DVTR;{M(Oxidation (M))|F}G{I|L}VEDVTR;{M(Oxidation (M))|F}G{I|L}DVEVTR;{M(Oxidation (M))|F}VAD{I|L}DVTR;{M(Oxidation (M))|F}VAVSV{I|L}DW;{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}VSV{I|L}W;{M(Oxidation (M))|F}VAVSVD{I|L}W;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VD{I|L}D{I|L}W;{M(Oxidation (M))|F}G{I|L}VDEVTR;{M(Oxidation (M))|F}G{I|L}VSV{I|L}DW 7.2375;6.8312;6.6555;6.4632;6.4331;6.4107;6.3862;6.3679;6.2493;6.2407 -;-;-;-;-;-;-;-;-;- 626 + 1 1.081 66406.1 1.0 10510 4917 15424 HBL1_DMSO_200M_050219_2,15429 HBL1_DMSO_200M_050219_2,15429,FGIDLDTRV True True FGIDLDTRV 81.130638 518.277514636517 41792996.0 15424.0 ENSG00000033050|ENST00000287844|ABCF2;;ENST00000465687.1_1_3:88367275-88367665:+|nuORF;;nc|ENSG00000285292|Q9UG63-2|ABCF2 4.24215292930603 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15430 81.132 42.0 1304800.0 25 0 117790.0 + 22338 LPSLTMLASL 10 81 523.3030805482477 1044.5916081632954 2 523.3026611208916 MULTI CID FTMS 0 0 0 15424 1175809.625 0.5915348399874379 7 -0.7540283203125 6 Unmodified _LPSLTMLASL_ REV__ENST00000464150.2_1_15:51669612-51676112:+|nuORF 19.256988751693697 0.5244284437930726 4 SP{I|L}D{I|L}YPK{I|L} 9 -1 + 83.313 0.0 0.0 7.9757 7.9757 87.169 0.0 0.0 0.0 27.562893943202624 12.887955392469692 12.887955392469692 5.255762612236907 0 1.1989700043360187 1.6989700043360187 0.0 0.0 SP{I|L}D{I|L}YPK{I|L};{I|L}PSD{I|L}YPK{I|L};SP{I|L}D{I|L}Y{I|L}[KP];{I|L}PSD{I|L}Y{I|L}[KP];{I|L}PY{I|L}P{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};{I|L}PYP{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L};{I|L}PYP{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[KP];{I|L}PY{I|L}P{[MS]|[{M(Oxidation (M))|F}A]}[KP];{I|L}T[KQ]MSPK{I|L};[{I|L}P]D{I|L}Y[KT][VP] 7.9757;7.4725;6.7174;6.2143;4.4834;4.4834;3.606;3.606;2.1322;1.8073 -;-;-;-;-;-;-;-;-;- 630 + 1 1.081 49844.2 1.0 10511 4917 15424 HBL1_DMSO_200M_050219_2,15430 HBL1_DMSO_200M_050219_2,15430,LPSLTMLASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15431 81.134 90.0 1013700.0 25 0 131550.0 + 38172 TPPVVLRL 8 79 447.7920228055828 893.5694926779656 2 447.7924072146416 MULTI CID FTMS 0 0 0 15424 954640.75 0.6171243401395549 1 -0.0887451171875 7 Unmodified _TPPVVLRL_ ENSG00000181163|ENST00000296930|NPM1;ENST00000412580.1_1_2:122466160-122466664:-|nuORF;ENST00000434232.1_1_7:36858782-36858980:+|nuORF;ENST00000502784.2_1_5:93019019-93019256:-|nuORF;ENST00000518587.1_1_5:170814889-170819841:+|nuORF;nc|ENSG00000181163|P06748-2|NPM1;nc|ENSG00000181163|P06748-3|NPM1 50.855029805455786 0.1352255786796883 4 TPPVV{I|L}[R{I|L}] 8 0 + 73.153 0.0 0.0 8.1867 8.1867 82.644 0.0 0.0 0.0 51.726759565325295 11.906140654642812 11.906140654642812 2.218487496163561 0 0.4247425010840047 2.0 0.0 0.7302046884880937 + + TPPVV{I|L}[R{I|L}];TPPV{I|L}V[R{I|L}];TPPV{I|L}[R{I|L}]V;TP{I|L}[VP]V[R{I|L}];TP{I|L}[VP][R{I|L}]V;T{I|L}P[VP]V[R{I|L}];T{I|L}P[VP][R{I|L}]V 8.1867;7.9384;6.6252;5.84;4.5268;2.3635;1.0503 +;-;-;-;-;-;- + 99 + 1 1.081 75585.5 1.0 10512 4917 15424 HBL1_DMSO_200M_050219_2,15431 HBL1_DMSO_200M_050219_2,15431,TPPVVLRL False True TPPVVLRL 81.133811 447.792407214642 29546402.0 15424.0 ENST00000434232.1_1_7:36858782-36858980:+|nuORF;;ENST00000412580.1_1_2:122466160-122466664:-|nuORF;;nc|ENSG00000181163|P06748-2|NPM1;;ENSG00000181163|ENST00000296930|NPM1;;ENST00000518587.1_1_5:170814889-170819841:+|nuORF;;nc|ENSG00000181163|P06748-3|NPM1;;ENST00000502784.2_1_5:93019019-93019256:-|nuORF 4.100660483042399 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15432 81.136 105.0 2964100.0 25 0 628570.0 -1 LASTECFL 8 97 470.7263908802107 939.4382288272216 2 470.7262145876884 MULTI CID FTMS 0 0 0 15424 754835.0625 0.237275259285757 -24 2.567054748535156 8 Carbamidomethyl (C) _LASTEC(Carbamidomethyl (C))FL_ ENSG00000196248|ENST00000641123|OR10S1;nc|ENSG00000196248|Q8NGN2|OR10S1 32.116972079565 0.368454113111938 4 {I|L}AS 3 -1 51.069 0.0 0.0 5.4361 0.0 0.0 0.0 665.2626948368139 665.2626948368139 35.79106933913968 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.6643943297944485 0.0 {I|L}AS 5.4361 + + 242 + 1 1.081 242899.8 1.0 10513 4917 15424 HBL1_DMSO_200M_050219_2,15432 HBL1_DMSO_200M_050219_2,15432,LASTECFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15433 81.14 182.0 558710.0 25 0 42411.0 -1 YQRCKWEYQMI 11 96 782.3589450633284 1562.7033371934567 2 782.8605834841728 MULTI CID FTMS 0 0 0 15424 619886.625 0.4569158290033562 2 -0.2410507202148437 9 Oxidation (M) _YQRCKWEYQM(Oxidation (M))I_ ENST00000527531.5_1_11:108253785-108256679:-|nuORF 3.2813086475875832 0.8596665074481906 4 [HD]EAQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 13 -1 + 69.265 0.0 0.0 4.4324 4.4324 66.618 0.0 0.0 0.0 0.5558471418748923 5.796990064801328 0.5558471418748923 0.5558471418748923 0 0.5 0.0 1.0356668758921828 0.8494850021680094 [HD]EAQQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QDA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQQW{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QW{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]QDA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]QW{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EA[AG]QDA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQ[AG]DA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQQDA{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QDA{M(Oxidation (M))|F}Y[AG][{I|L}V] 4.4324;4.3968;4.2;4.1644;4.0957;3.8633;3.8518;3.8518;3.8518;3.8162 -;-;-;-;-;-;-;-;-;- 1131 1 1.081 75416.6 1.0 10514 4917 15424 HBL1_DMSO_200M_050219_2,15433 HBL1_DMSO_200M_050219_2,15433,YQRCKWEYQMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15434 81.142 130.0 753490.0 25 0 163110.0 + 14112 IATILREI 8 91 464.79478870954057 927.5750244858812 2 464.7950012087822 MULTI CID FTMS 0 0 0 15424 598788.3125 0.949885257633446 -1 0.1228485107421875 10 Unmodified _IATILREI_ ENSG00000102572|ENST00000539966|STK24;ENSG00000115694|ENST00000316586|STK25;ENST00000492127.5_1_2:242439390-242441021:-|nuORF;nc|ENSG00000102572|Q9Y6E0|STK24;nc|ENSG00000115694|O00506-2|STK25;nc|ENSG00000115694|O00506-3|STK25 45.69961567697781 0.159474709770503 4 {I|L}AT{I|L}{I|L}{[RE]|[WV]}{I|L} 8 0 + 80.143 0.0 0.0 8.6401 8.6401 87.694 0.0 0.0 0.0 58.09176592564398 11.223637474483468 11.223637474483468 4.771212547196626 0 1.3494850021680094 2.0 0.5 0.3054621874040891 + + {I|L}AT{I|L}{I|L}{[RE]|[WV]}{I|L};{I|L}A{I|L}T{I|L}{[RE]|[WV]}{I|L};[{I|L}T][R{I|L}]E[{I|L}A]{I|L} 8.6401;8.1257;3.1916 +;-;- + 189 + 1 1.081 77909.6 1.0 10515 4917 15424 HBL1_DMSO_200M_050219_2,15434 HBL1_DMSO_200M_050219_2,15434,IATILREI False True IATILREI 81.142222 464.7956 5736178.5 15424.0 ENST00000492127.5_1_2:242439390-242441021:-|nuORF;;nc|ENSG00000115694|O00506-3|STK25;;nc|ENSG00000102572|Q9Y6E0|STK24;;nc|ENSG00000115694|O00506-2|STK25;;ENSG00000102572|ENST00000539966|STK24;;ENSG00000115694|ENST00000316586|STK25 1.2777754664421082 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15435 81.144 70.0 1001000.0 25 0 71870.0 + 35454 STLILPTGPP 10 94 498.29291355180845 994.5712741704168 2 498.2950622439384 MULTI CID FTMS 0 0 0 15424 643560.6875 0.1148618436916096 -2 0.2315216064453125 11 Unmodified _STLILPTGPP_ REV__ENST00000305557.9_1_2:74666898-74667633:-|nuORF;REV__ENST00000460968.1_1_2:74666898-74667252:-|nuORF 46.020951573049366 0.1035046897853725 4 {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV 9 -1 + 42.292 0.0 0.0 4.2522 4.2522 82.574 0.0 0.0 0.0 16.801915820410684 3.646840095548427 3.646840095548427 23.521825181113623 0 0.3252574989159953 0.0 0.4247425010840047 0.0 {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV;{[MG]|[TS]}T{I|L}{I|L}S{M(Oxidation (M))|F}KV;{[MG]|[TS]}TV[{I|L}P]{I|L}[PA]P 4.2522;1.8872;1.3897 -;-;- 340 + 1 1.081 61349.2 1.0 10516 4917 15424 HBL1_DMSO_200M_050219_2,15435 HBL1_DMSO_200M_050219_2,15435,STLILPTGPP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15436 81.146 103.0 376440.0 25 0 70973.0 21005 LNTFKLFLKET 11 56 677.3946198570956 1352.774686780991 2 677.3955566287041 MULTI CID FTMS 0 0 0 15424 582422.0625 0.5061512119435516 3 -0.33123779296875 12 Unmodified _LNTFKLFLKET_ ENSG00000158077|ENST00000299481|NLRP14 8.155526934196011 0.8366696279279818 4 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}G 5 8 31.58 0.0 0.0 2.3345 0.0 0.0 0.0 789.4915806621035 789.4915806621035 18.481362441963327 0.0 0.0 0.0 0 0.0 0.0 1.086696871556164 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}G 2.3345 - 69 1 1.081 44211.9 1.0 10517 4917 15424 HBL1_DMSO_200M_050219_2,15436 HBL1_DMSO_200M_050219_2,15436,LNTFKLFLKET False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15437 81.148 112.0 984530.0 25 0 186950.0 -1 ALLETYCA 8 90 314.15345579277783 939.4385379785336 3 314.1532775759697 MULTI CID FTMS 0 0 0 15424 580375.3125 0.2942667823874549 9 -0.9510650634765624 13 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 20.453626601364224 0.6087503291685402 4 A{I|L}{I|L} 3 -1 49.693 0.0 0.0 5.2896 0.0 0.0 0.0 639.2114151296903 639.2114151296903 36.559800789692304 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 A{I|L}{I|L} 5.2896 + + 78 + 1 1.081 94593.7 1.0 10518 4917 15424 HBL1_DMSO_200M_050219_2,15437 HBL1_DMSO_200M_050219_2,15437,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15438 81.154 286.0 508610.0 25 0 48338.0 + 39598 VDFDTRKF 8 158 514.2631115531 0 514.2634155154228 PEAK CID FTMS 0 0 0 15424 302257.125 0.7222155186060195 -1 0.1228485107421875 14 Unmodified _VDFDTRKF_ REV__ENSG00000206530|ENST00000393845|CFAP44 28.486842064014134 0.2575685520298453 4 {M(Oxidation (M))|F}SG{M(Oxidation (M))|F} 4 -1 31.186 0.0 0.0 3.038 0.0 0.0 214.0901825827379 371.20673547916255 585.2969180619004 0.0 0.0 0.0 0.0 0 0.5 0.0 0.7742275032520141 0.0 {M(Oxidation (M))|F}SG{M(Oxidation (M))|F} 3.038 - 347 + 1 1.081 113618.3 1.0 10519 4917 15424 HBL1_DMSO_200M_050219_2,15438 HBL1_DMSO_200M_050219_2,15438,VDFDTRKF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15439 81.158 232.0 412740.0 25 0 34797.0 + 40252 VGSTSASRGL 10 119 467.7495265664813 933.4845001997628 2 467.7499572634697 MULTI CID FTMS 0 0 0 15424 284840.375 0.2704132853974739 3 -0.33123779296875 15 Unmodified _VGSTSASRGL_ REV__ENSG00000144460|ENST00000272907|NYAP2;REV__ENSG00000166924|ENST00000300179|NYAP1;REV__nc|ENSG00000144460|Q9P242-3|NYAP2;REV__nc|ENSG00000144460|Q9P242|NYAP2;REV__nc|ENSG00000166924|Q6ZVC0-2|NYAP1 22.736283301280096 0.4578556481593033 4 [VG]NAA[W{M(Oxidation (M))|F}]AV 9 -1 + 29.415 0.0 0.0 3.1511 3.1511 65.91 0.0 0.0 0.0 4.378713199345729 2.340832060333682 2.340832060333682 2.340832060333682 0 0.5 1.6989700043360187 0.0 0.2742275032520141 [VG]NAA[W{M(Oxidation (M))|F}]AV;[VG]NAA[W{M(Oxidation (M))|F}]G{I|L};RNHTPPNV;[VG][KQ][W{M(Oxidation (M))|F}]AV;[VG]{I|L}QQ[YG]AV;[VG][KQ][W{M(Oxidation (M))|F}]G{I|L};[VG]{I|L}QQ[YG]G{I|L};[VG]{I|L}[HD][VP][TP];[VG]{I|L}QQ[YQ]V;RGGHTPPNV 3.1511;2.9003;2.6407;2.4571;2.3175;2.2063;2.0667;1.9369;1.7328;1.6485 -;-;-;-;-;-;-;-;-;- 598 + 1 1.081 79131.1 1.0 10520 4917 15424 HBL1_DMSO_200M_050219_2,15439 HBL1_DMSO_200M_050219_2,15439,VGSTSASRGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15440 81.163 269.0 432440.0 25 0 41015.0 + 18866 LASQHEEL 8 126 309.49051870186247 925.4497267057876 3 309.4901916384697 MULTI CID FTMS 0 0 0 15424 274794.46875 0.7132118636149513 6 -0.6369781494140625 16 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 9.347437153973935 0.7675937258251505 4 {[MG]|[TS]}[WP]{[HG]|PP}E{I|L} 8 -1 {[MG]|[TS]}[WP]{[HG]|PP}E + + 13.495 -21.761 -2.7395 1.4582 1.4582 44.311 0.0 0.0 0.0 0.0 2.481880270062007 0.0 0.0 0 0.0 0.0 0.0 0.0 {[MG]|[TS]}[WP]{[HG]|PP}E{I|L} 1.4582 - 146 + 1 1.081 98129.2 1.0 10521 4917 15424 HBL1_DMSO_200M_050219_2,15440 HBL1_DMSO_200M_050219_2,15440,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15441 81.175 713.0 231130.0 25 0 28653.0 + -1 SINDLNMIAC 10 170 555.2514075022132 1108.4882620712262 2 555.2531616091728 MULTI CID FTMS 0 0 0 15424 207069.0 0.3426315635980955 1 -0.0887451171875 17 Oxidation (M) _SINDLNM(Oxidation (M))IAC_ REV__ENSG00000172594|ENST00000368440|SMPDL3A;REV__nc|ENSG00000172594|Q92484-2|SMPDL3A 27.628801355627647 0.3479284626772844 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SN{I|L}D 7 -1 54.997 0.0 0.0 4.9614 0.0 0.0 0.0 336.0700983379894 336.0700983379894 16.40967558295541 0.0 0.0 0.0 0 1.5044321917401078 2.0 0.2302046884880938 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SN{I|L}D 4.9614 - 729 + 1 1.081 129970.1 1.0 10522 4917 15424 HBL1_DMSO_200M_050219_2,15441 HBL1_DMSO_200M_050219_2,15441,SINDLNMIAC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15442 81.181 322.0 393830.0 25 0 35187.0 -1 DIVFQQCL 8 150 511.75186774520887 1021.4891825572178 2 511.2522155642509 MULTI CID FTMS 0 0 0 15424 173788.0625 0.4652350993197426 -6 0.628631591796875 18 Carbamidomethyl (C) _DIVFQQC(Carbamidomethyl (C))L_ ENST00000420410.5_1_3:187930599-188124050:+|nuORF 13.50788311687929 0.7113601687236069 4 VY{M(Oxidation (M))|F}{M(Oxidation (M))|F}WAA 7 -1 18.927 0.0 0.0 1.8529 0.0 0.0 119.07418257881017 0.0 119.07418257881017 0.0 3.442224079240898 0.0 0.0 0 0.0 0.0 0.0 0.0 VY{M(Oxidation (M))|F}{M(Oxidation (M))|F}WAA 1.8529 - 1206 1 1.081 100776.1 1.0 10523 4917 15424 HBL1_DMSO_200M_050219_2,15442 HBL1_DMSO_200M_050219_2,15442,DIVFQQCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15443 81.195 800.0 421260.0 25 0 51335.0 + 45609 YVISEGFLKA 10 190 563.8110810446944 1125.6076091561888 2 563.8106567263603 MULTI CID FTMS 0 0 0 15424 148928.15625 0.1905194591498413 4 -0.4319076538085937 19 Unmodified _YVISEGFLKA_ ENSG00000006831|ENST00000357103|ADIPOR2 72.96794272382148 0.0188410189619069 4 YV{I|L}SEG{M(Oxidation (M))|F}{I|L}[KA] 10 0 + 97.88 0.0 0.0 8.6958 8.6958 94.55 0.0 0.0 0.0 36.53212513775344 11.034087492996392 11.034087492996392 11.034087492996392 0 1.055462187404089 2.0 0.8661764699893073 0.7059771852360797 + + YV{I|L}SEG{M(Oxidation (M))|F}{I|L}[KA];YV{I|L}SEG{M(Oxidation (M))|F}[KA]{I|L};YV{I|L}ST[MT]{I|L}[KA];YV{I|L}ST[KT]AP{M(Oxidation (M))|F};YV{I|L}ST[KT]AM{I|L};YV{I|L}ST[KT]VC{I|L};YV{I|L}ST[MT][KA]{I|L};YV{I|L}ST[KT]A{M(Oxidation (M))|F}P;YV{I|L}ST[KS]{I|L}C{I|L};YVA[KT]TS{I|L}P{M(Oxidation (M))|F} 8.6958;7.7155;6.852;6.4728;6.2054;5.925;5.8717;5.8112;5.4197;4.9275 +;-;-;-;-;-;-;-;-;- + 7148 + 1 1.081 254610.2 0.9900000095367432 10524 4917 15424 HBL1_DMSO_200M_050219_2,15443 HBL1_DMSO_200M_050219_2,15443,YVISEGFLKA True True YVISEGFLKA 81.195086 563.81065672636 9663350.0 15424.0 ENSG00000006831|ENST00000357103|ADIPOR2 7.662346522013347 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15444 81.21 800.0 369060.0 25 0 82498.0 + 9910 FPFYGKPMRI 10 143 628.3361852914626 1254.657817649725 2 628.8390380740166 MULTI CID FTMS 0 0 0 15424 133567.28125 0.0611564800082416 -10 1.0401763916015625 20 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 30.63653989081413 0.2803493085145199 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}Y 4 6 43.857 0.0 0.0 3.4955 0.0 0.0 0.0 697.3812758873343 697.3812758873343 11.918402966525576 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}Y 3.4955 + + 813 1 1.081 216419.2 0.9399999976158142 10525 4917 15424 HBL1_DMSO_200M_050219_2,15444 HBL1_DMSO_200M_050219_2,15444,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15446 81.214 19.0 3762900.0 25 0 356520.0 + 3563 DAAAFFKSV 9 84 478.2478577894586 954.4811626457172 2 478.2480041384697 MULTI CID FTMS 0 0 0 15445 2678530.25 0.9210929537700638 1 -0.1523056030273437 1 Unmodified _DAAAFFKSV_ ENSG00000065923|ENST00000616978|SLC9A7;nc|ENSG00000065923|Q96T83|SLC9A7 29.84058131909904 0.1515068451768857 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}HPKV 8 5 + 39.576 0.0 0.0 4.1464 4.1464 70.159 0.0 0.0 0.0 17.52488173972033 6.656687756324686 6.656687756324686 3.0102999566398125 0 0.8252574989159953 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}HPKV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}SKV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}KSV 4.1464;3.831;3.5156 -;-;- 195 + 1 1.071 63230.8 1.0 10526 4918 15445 HBL1_DMSO_200M_050219_2,15446 HBL1_DMSO_200M_050219_2,15446,DAAAFFKSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15447 81.215 19.0 2943400.0 25 0 229950.0 + 15603 IPYQDLPHL 9 68 548.2952846035856 1094.5760162739712 2 548.2955810427666 MULTI CID FTMS 0 0 0 15445 2736111.75 1.0 0 0.0 2 Unmodified _IPYQDLPHL_ ENSG00000074416|ENST00000265052|MGLL;ENST00000479967.5_1_3:127434467-127541990:-|nuORF;nc|ENSG00000074416|Q99685-2|MGLL;nc|ENSG00000074416|Q99685|MGLL 57.72198328787511 0.0273433238377839 4 {I|L}PYQD{I|L}P[H{I|L}] 9 0 + 87.317 0.0 0.0 7.9773 7.9773 94.295 0.0 0.0 0.0 54.12971259689115 4.762036441594191 4.762036441594191 13.455612550363796 0 1.575257498915995 1.6989700043360187 0.3494850021680094 0.4247425010840047 + + {I|L}PYQD{I|L}P[H{I|L}];{I|L}PY[AG]D{I|L}P[H{I|L}] 7.9773;6.748 +;- + 192 + 1 1.071 50557.3 1.0 10527 4918 15445 HBL1_DMSO_200M_050219_2,15447 HBL1_DMSO_200M_050219_2,15447,IPYQDLPHL True True IPYQDLPHL 81.2155 548.295581042767 95741238.0 15445.0 ENSG00000074416|ENST00000265052|MGLL;;nc|ENSG00000074416|Q99685-2|MGLL;;nc|ENSG00000074416|Q99685|MGLL;;ENST00000479967.5_1_3:127434467-127541990:-|nuORF 6.880942662556966 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15448 81.217 24.0 2359700.0 25 0 504220.0 -1 0 56 336.104633924523 670.194714915846 2 336.1048766970634 MULTI CID FTMS 0 0 0 15445 2614224.5 1.0 0 0.0 3 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.071 52053.4 1.0 10528 4918 15445 HBL1_DMSO_200M_050219_2,15448 HBL1_DMSO_200M_050219_2,15448, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15449 81.218 62.0 1291500.0 25 0 173210.0 + 3966 DALQGFKI 8 91 446.2504227142664 890.4862924953328 2 446.2504760622978 MULTI CID FTMS 0 0 0 15445 1190631.25 0.4595344527935881 -1 0.0887451171875 4 Unmodified _DALQGFKI_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 50.855029805455786 0.1352255786796883 4 {[DA]|[EG]}{I|L}QG{M(Oxidation (M))|F}K{I|L} 8 0 + 66.464 0.0 0.0 7.4638 7.4638 91.472 0.0 0.0 0.0 38.379231027444405 12.5190243216651 12.5190243216651 9.262137858390815 0 0.805462187404089 1.6989700043360187 0.0 0.805462187404089 + + {[DA]|[EG]}{I|L}QG{M(Oxidation (M))|F}K{I|L};{[DA]|[EG]}{I|L}[AG]G{M(Oxidation (M))|F}K{I|L} 7.4638;6.4236 +;- + 153 + 1 1.071 69622.9 1.0 10529 4918 15445 HBL1_DMSO_200M_050219_2,15449 HBL1_DMSO_200M_050219_2,15449,DALQGFKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15450 81.22 69.0 709320.0 25 0 92657.0 + 36638 TATMHILVV 9 80 492.78097122030846 983.5473895074168 2 492.7813293337822 MULTI CID FTMS 0 0 0 15445 774093.25 0.5339747961836439 2 -0.24249267578125 5 Unmodified _TATMHILVV_ ENSG00000164880|ENST00000404767|INTS1;ENST00000468115.1_1_7:1523234-1533501:-|nuORF 44.40701690623563 0.0526327925666318 4 [H{I|L}]MTAT{I|L}VV 9 6 + 36.634 0.0 0.0 3.7246 3.7246 66.805 0.0 0.0 0.0 1.706962271689754 21.685071558341 1.706962271689754 1.9382002601611248 0 0.6677353201839438 0.0 0.7614393726401688 0.0 [H{I|L}]MTAT{I|L}VV;[TA][QP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VV;[{I|L}T][HM]AT{I|L}VV;[H{I|L}]MT{I|L}[TA]VV;[H{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L}VV;[{I|L}T][HM]{I|L}[TA]VV 3.7246;3.5276;2.6094;2.5284;1.7717;1.4131 -;-;-;-;-;- 266 1 1.071 41030.9 1.0 10530 4918 15445 HBL1_DMSO_200M_050219_2,15450 HBL1_DMSO_200M_050219_2,15450,TATMHILVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15451 81.221 53.0 920860.0 25 0 82321.0 + 12518 GVFEGKLNVI 10 94 538.310143889891 1074.605734846582 2 538.3101684451103 MULTI CID FTMS 0 0 0 15445 445990.625 0.9618334418833352 -1 0.0887451171875 6 Unmodified _GVFEGKLNVI_ ENSG00000100060|ENST00000356998|MFNG;ENST00000489515.1_1_22:37866003-37868629:-|nuORF;nc|ENSG00000100060|O00587-2|MFNG 27.628801355627647 0.3479284626772844 4 [VG]G{I|L}[KG]E{M(Oxidation (M))|F}GV{I|L} 11 5 + 29.262 0.0 0.0 2.723 2.723 75.805 0.0 0.0 0.0 0.5771521866870835 8.592448394571651 0.5771521866870835 10.274886042495876 0 1.0044321917401078 1.5228787452803376 0.0 0.0 [VG]G{I|L}[KG]E{M(Oxidation (M))|F}GV{I|L};[VG]QQ[Y{I|L}]VGV{I|L};[VG]G[QA][Y{I|L}]VGV{I|L};[KP]T[KG]E{M(Oxidation (M))|F}GV{I|L};{[NV]|[RG]}{I|L}[KG]E{M(Oxidation (M))|F}GV{I|L};{[NV]|[RG]}{I|L}[WK]{M(Oxidation (M))|F}GV{I|L};{[TV]|[{I|L}S]}[DP][Y{I|L}]RV{I|L} 2.723;1.7668;1.4482;1.1592;1.0151;0.8512;0.8036 -;-;-;-;-;-;- 295 1 1.071 47928.9 1.0 10531 4918 15445 HBL1_DMSO_200M_050219_2,15451 HBL1_DMSO_200M_050219_2,15451,GVFEGKLNVI False True GVFEGKLNVI 81.221217 538.31016844511 4173113.75 15445.0 ENSG00000100060|ENST00000356998|MFNG;;ENST00000489515.1_1_22:37866003-37868629:-|nuORF;;nc|ENSG00000100060|O00587-2|MFNG 5.353037039438884 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15452 81.224 116.0 552990.0 25 0 53465.0 23715 LTTRPSESKT 10 80 560.3015854213894 1118.5886179095787 2 560.3022949099541 MULTI CID FTMS 0 0 0 15445 384578.65625 0.0028395369133852 14 -1.5787506103515625 7 Unmodified _LTTRPSESKT_ ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1 13.042465956692816 0.6287021003332052 4 T{I|L}V 3 9 19.693 0.0 0.0 1.7605 0.0 0.0 334.1695501589417 468.1930330865844 802.3625832455261 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 T{I|L}V 1.7605 - 226 + 1 1.071 55173.2 1.0 10532 4918 15445 HBL1_DMSO_200M_050219_2,15452 HBL1_DMSO_200M_050219_2,15452,LTTRPSESKT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15453 81.234 579.0 297550.0 25 0 13618.0 -1 0 138 845.8943788318276 1689.774204730455 2 845.8933593630791 MULTI CID FTMS 0 0 0 15445 291421.53125 0.3099103982197952 -2 0.2115936279296875 8 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQNA{M(Oxidation (M))|F}YQV{I|L} 14 -1 + 136.76 0.0 0.0 8.0933 8.0933 88.92 0.0 0.0 0.0 6.593793813122062 9.757272671616306 6.593793813122062 6.593793813122062 0 1.329689690656103 1.3979400086720375 2.8525684359364405 3.4336068845642203 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]Q[AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ]V[CS]QQGGA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS][AG]QNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]Q[AG]NA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QQNA{M(Oxidation (M))|F}Y[AG]V{I|L} 8.0933;7.7031;7.5577;7.5577;7.5577;7.5577;7.1675;7.1675;7.1675;7.1675 -;-;-;-;-;-;-;-;-;- 20095 1 1.071 120555.3 1.0 10533 4918 15445 HBL1_DMSO_200M_050219_2,15453 HBL1_DMSO_200M_050219_2,15453, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15454 81.245 648.0 374940.0 25 0 21400.0 + 38322 TQLDLEDVQV 10 213 580.2964548715411 1158.578356809882 2 580.2975341677666 MULTI CID FTMS 0 0 0 15445 231884.109375 0.2808328334427731 -2 0.2115936279296875 9 Unmodified _TQLDLEDVQV_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 74.19965305603844 0.0188013450058842 4 {NN|[MP]|[D{I|L}]|[EV]}QT{I|L}EDV{[QV]|[N{I|L}]|[RA]|[KV]} 10 4 + 77.733 0.0 0.0 6.7093 6.7093 85.625 0.0 0.0 0.0 12.710667722865397 3.379231027444405 3.379231027444405 7.020286184402721 0 0.3252574989159953 1.6989700043360187 1.602769684595498 0.8609243748081783 {NN|[MP]|[D{I|L}]|[EV]}QT{I|L}EDV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}TEDV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}[AG]T{I|L}EDV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}QTNKDV{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}ET{I|L}EDV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}QT{I|L}EK{I|L}{[CP]|[EA]};[Q{I|L}]DT{I|L}EDV{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}NT{I|L}EDV{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}{I|L}QEEDV{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}AAD{I|L}EDV{[QV]|[N{I|L}]|[RA]|[KV]} 6.7093;6.1034;5.9183;5.6491;5.6122;5.602;5.3937;5.3568;5.3349;5.3205 -;-;-;-;-;-;-;-;-;- 20061 1 1.071 182765.7 1.0 10534 4918 15445 HBL1_DMSO_200M_050219_2,15454 HBL1_DMSO_200M_050219_2,15454,TQLDLEDVQV True True TQLDLEDVQV 81.245119 580.297534167767 6876315.0 15445.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 4.507723728815715 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15455 81.257 703.0 280190.0 25 0 24793.0 + -1 NTFNMEMYI 9 181 597.7438337261767 1193.4731145191531 2 597.7446777224541 MULTI CID FTMS 0 0 0 15445 179769.21875 0.5089711617971273 -1 0.0887451171875 10 2 Oxidation (M) _NTFNM(Oxidation (M))EM(Oxidation (M))YI_ REV__ENSG00000006125|ENST00000610402|AP2B1;REV__ENST00000441188.2_1_X:92477682-92478501:-|nuORF;REV__nc|ENSG00000006125|P63010-3|AP2B1;REV__nc|ENSG00000006125|P63010|AP2B1 12.531546534597751 0.4974689918368763 4 YVTNT{M(Oxidation (M))|F}{I|L} 7 -1 24.376 0.0 0.0 2.0425 0.0 0.0 337.04197890449376 0.0 337.04197890449376 0.0 2.803695511246982 0.0 0.0 0 0.718765315847925 0.0 0.7134679910804405 0.0 YVTNT{M(Oxidation (M))|F}{I|L} 2.0425 - 553 1 1.071 145305.2 1.0 10535 4918 15445 HBL1_DMSO_200M_050219_2,15455 HBL1_DMSO_200M_050219_2,15455,NTFNMEMYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15456 81.27 723.0 387130.0 25 0 40358.0 + 10300 FSAERLVEI 9 222 532.293708148024 1062.572863362848 2 532.2935058474541 MULTI CID FTMS 0 0 0 15445 191452.546875 0.5563358366175696 -1 0.0887451171875 11 Unmodified _FSAERLVEI_ ENSG00000182185|ENST00000471583|RAD51B;ENST00000553595.5_1_14:68331761-69149671:+|nuORF;nc|ENSG00000182185|O15315-1|RAD51B;nc|ENSG00000182185|O15315-4|RAD51B;nc|ENSG00000182185|O15315-5|RAD51B;nc|ENSG00000182185|O15315|RAD51B 63.22749603027936 0.0242951379232427 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AER{I|L}V{I|L}E 9 2 + 62.973 0.0 0.0 5.9264 5.9264 75.948 0.0 0.0 0.0 5.472376668749647 2.2577249674798594 2.2577249674798594 2.2577249674798594 0 1.1549471895720984 2.0 0.9361818737241734 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AER{I|L}V{I|L}E;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AER{I|L}VE{I|L};{M(Oxidation (M))|F}{I|L}V{I|L}REAC{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AE[VG]{I|L}V{I|L}E;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AE[VG]{I|L}VE{I|L};{M(Oxidation (M))|F}{I|L}V{I|L}WWS{I|L};{M(Oxidation (M))|F}{I|L}V{I|L}[VG]EAC{I|L};{M(Oxidation (M))|F}SAEK[RN]V{I|L};{M(Oxidation (M))|F}SAEKRRG{I|L};{M(Oxidation (M))|F}{I|L}V{I|L}WWTV 5.9264;5.714;5.4114;5.0599;4.8474;4.7449;4.5448;4.1593;3.8696;3.8141 -;+;-;-;-;-;-;-;-;- + 5339 1 1.071 215018.7 1.0 10536 4918 15445 HBL1_DMSO_200M_050219_2,15456 HBL1_DMSO_200M_050219_2,15456,FSAERLVEI True True FSAERLVEI 81.269877 532.293505847454 2744600.5 15445.0 nc|ENSG00000182185|O15315-5|RAD51B;;nc|ENSG00000182185|O15315-1|RAD51B;;nc|ENSG00000182185|O15315-4|RAD51B;;ENST00000553595.5_1_14:68331761-69149671:+|nuORF;;ENSG00000182185|ENST00000471583|RAD51B;;nc|ENSG00000182185|O15315|RAD51B 4.218855381011963 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15457 81.282 725.0 202940.0 25 0 49267.0 42133 VRRRQRSLEEI 11 141 721.4216394421248 0 721.4210082888603 PEAK CID FTMS 0 0 0 15445 159761.25 1.0 0 0.0 12 Unmodified _VRRRQRSLEEI_ ENSG00000135929|ENST00000258415|CYP27A1;ENST00000494263.5_1_2:219646839-219678911:+|nuORF 1.3295316138638542 0.4761840153648598 4 N{I|L}{I|L}[{M(Oxidation (M))|F}V]RQ{I|L} 8 9 35.948 0.0 0.0 2.495 0.0 0.0 246.19061667546208 208.0735262506469 454.264142926109 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6307196863200843 N{I|L}{I|L}[{M(Oxidation (M))|F}V]RQ{I|L} 2.495 - 636 + 1 1.071 113365.0 1.0 10537 4918 15445 HBL1_DMSO_200M_050219_2,15457 HBL1_DMSO_200M_050219_2,15457,VRRRQRSLEEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15458 81.296 790.0 270970.0 25 0 22320.0 + 34556 SPFALQNTI 9 188 495.7672612432872 0 495.7667724490166 PEAK CID FTMS 0 0 0 15445 168388.234375 1.0 0 0.0 13 Unmodified _SPFALQNTI_ ENSG00000115317|ENST00000258080|HTRA2;ENST00000465521.1_1_2:74757592-74758334:+|nuORF;ENST00000484352.5_1_2:74757313-74758690:+|nuORF;ENST00000484881.5_1_2:74756974-74758788:+|nuORF;nc|ENSG00000115317|O43464-3|HTRA2;nc|ENSG00000115317|O43464-4|HTRA2 49.93300154707207 0.0318517243429362 4 NQ{I|L}A{M(Oxidation (M))|F}D 6 8 26.254 0.0 0.0 2.6532 0.0 0.0 232.14632560981823 66.03578363590077 298.182109245719 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 1.079689690656103 0.0 NQ{I|L}A{M(Oxidation (M))|F}D 2.6532 - 719 + 1 1.071 160575.7 1.0 10538 4918 15445 HBL1_DMSO_200M_050219_2,15458 HBL1_DMSO_200M_050219_2,15458,SPFALQNTI True True SPFALQNTI 81.296098 495.766772449017 2388932.25 15445.0 ENST00000465521.1_1_2:74757592-74758334:+|nuORF;;ENST00000484352.5_1_2:74757313-74758690:+|nuORF;;nc|ENSG00000115317|O43464-4|HTRA2;;nc|ENSG00000115317|O43464-3|HTRA2;;ENSG00000115317|ENST00000258080|HTRA2;;ENST00000484881.5_1_2:74756974-74758788:+|nuORF 2.174438069264094 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15459 81.309 658.0 106130.0 25 0 8863.9 + -1 MLKELSPI 8 117 946.5237142532474 945.5164377866472 1 946.9437133669852 MULTI CID FTMS 0 0 0 -1 0 14 Oxidation (M) _M(Oxidation (M))LKELSPI_ REV__ENSG00000198626|ENST00000366574|RYR2;REV__nc|ENSG00000198626|Q92736-2|RYR2 22.736283301280096 0.5659792798204337 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVAQQ{I|L} 8 -1 + 52.46 0.0 0.0 5.5483 5.5483 75.784 0.0 0.0 0.0 5.405374629902354 14.904630595263413 5.405374629902354 3.0102999566398125 0 0.5283773187068795 1.154901959985743 0.0 0.3054621874040891 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVAQQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KG{I|L}QQ{I|L};[{I|L}V]Q{M(Oxidation (M))|F}AQQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}A{M(Oxidation (M))|F}{I|L}QQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}AQQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVA[AG]Q{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVAQ[AG]{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VAQQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F}AQQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}A{I|L}QQ{I|L} 5.5483;5.23;4.9767;4.677;4.5745;4.5688;4.5688;4.5261;4.2562;4.2562 -;-;-;-;-;-;-;-;-;- 1725 1 1.071 51187.6 1.0 10539 4918 15445 HBL1_DMSO_200M_050219_2,15459 HBL1_DMSO_200M_050219_2,15459,MLKELSPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15460 81.321 693.0 162050.0 25 0 10354.0 -1 DCCWTRRLC 9 167 635.2669620991369 1268.5193712650737 2 635.2659789919853 MULTI CID FTMS 0 0 0 15445 152287.3125 0.7357629201423274 5 -0.5482330322265625 15 2 Carbamidomethyl (C) _DC(Carbamidomethyl (C))CWTRRLC(Carbamidomethyl (C))_ ENST00000336095.10_1_20:3914522-3914756:-|nuORF 11.640296217721598 0.521594087909532 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{M(Oxidation (M))|F}[NP]{I|L}TQ 9 -1 35.691 0.0 0.0 2.8136 0.0 0.0 0.0 263.99480081247856 263.99480081247856 5.038012203482303 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{M(Oxidation (M))|F}[NP]{I|L}TQ 2.8136 - 4818 1 1.071 86104.1 1.0 10540 4918 15445 HBL1_DMSO_200M_050219_2,15460 HBL1_DMSO_200M_050219_2,15460,DCCWTRRLC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15461 81.335 721.0 219740.0 25 0 13794.0 + + -1 SFYDSQGIHF 10 183 601.2662489822296 0 601.2678100466728 PEAK CID FTMS 0 0 0 15445 142275.53125 1.0 0 0.0 16 2 Carbamidomethyl (C) _FSC(Carbamidomethyl (C))LVESC(Carbamidomethyl (C))SL_ ENSG00000119231|ENST00000323460|SENP5 19.256988751693697 0.3042552096208299 4 YD 2 -1 9.464 0.0 0.0 0.78832 0.0 0.0 235.09248224004665 684.3106796638099 919.4031619038564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YD 0.78832 - 305 + 1 1.071 113145.2 1.0 10541 4918 15445 HBL1_DMSO_200M_050219_2,15461 HBL1_DMSO_200M_050219_2,15461,FSCLVESCSL False False SFYDSQGIHF 81.334783 601.267810046673 406033.5625 15445.0 ENSG00000119231|ENST00000323460|SENP5 4.175814231236775 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15462 81.349 800.0 337630.0 25 0 27235.0 + 29547 QLPELFHKI 9 196 375.5537274219199 1123.6393528659598 3 375.5536071658134 MULTI CID FTMS 0 0 0 15445 140329.21875 0.2935693227450024 -4 0.4007492065429687 17 Unmodified _QLPELFHKI_ ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-5|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2 31.26834338654808 0.1333407332142048 4 [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}HK{I|L} 9 0 [Q{I|L}] + + 40.744 14.025 5.8159 3.6261 3.6261 47.515 0.0 0.0 0.0 0.0 16.3722514624082 0.0 0.0 0 0.6643943297944485 0.0 0.3494850021680094 0.2059771852360797 + + [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}HK{I|L} 3.6261 + + 1172 + 1 1.071 218951.2 0.8299999833106995 10542 4918 15445 HBL1_DMSO_200M_050219_2,15462 HBL1_DMSO_200M_050219_2,15462,QLPELFHKI False True QLPELFHKI 81.3486 375.553607165813 32556593.0 15445.0 nc|ENSG00000069424|Q13303-2|KCNAB2;;nc|ENSG00000069424|Q13303-5|KCNAB2;;nc|ENSG00000069424|Q13303-4|KCNAB2;;nc|ENSG00000069424|Q13303|KCNAB2;;ENSG00000069424|ENST00000378083|KCNAB2 6.928262074788411 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15463 81.362 800.0 80138.0 25 0 14330.0 + 27774 PLPPCAGR 8 125 405.719061773109 809.423570613018 2 405.7187682986259 MULTI CID FTMS 0 0 0 15445 119915.921875 1.0 0 0.0 18 Unmodified _PLPPCAGR_ REV__ENST00000538966.5_1_X:153039107-153039924:+|nuORF 5.760428011301431 0.7893668129297577 4 E 1 -1 15.442 0.0 0.0 1.9078 0.0 0.0 662.3698729585243 0.0 662.3698729585243 0.0 4.957416651753048 0.0 0.0 0 0.0 0.0 0.1462566630072955 0.0 E 1.9078 - 36 + 1 1.071 56124.9 0.7799999713897705 10543 4918 15445 HBL1_DMSO_200M_050219_2,15463 HBL1_DMSO_200M_050219_2,15463,PLPPCAGR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15465 81.367 5.1 10105000.0 25 0 1488900.0 -1 ALMAAPLSL 9 63 451.75274496202985 901.4909369908596 2 451.7529479861259 MULTI CID FTMS 0 0 0 15464 9381983.0 0.7223898844289587 4 -0.3959274291992187 1 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 65.34 0.0 0.0 7.248 7.248 82.077 0.0 0.0 0.0 12.213855345942337 9.889917747712644 9.889917747712644 3.0102999566398125 0 0.6989700043360187 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[HG]|PP}S{M(Oxidation (M))|F}AS{I|L}A{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 7.248;6.9141;5.8931;5.1715;5.1173;4.8717;4.8074;4.7774;4.588;4.4734 -;-;-;-;-;-;-;-;-;- 188 1 1.064 46455.3 1.0 10544 4919 15464 HBL1_DMSO_200M_050219_2,15465 HBL1_DMSO_200M_050219_2,15465,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15466 81.368 2.2 25291000.0 25 0 1536500.0 -1 0 74 881.413916772189 1760.813280611178 2 881.4147827029228 MULTI CID FTMS 0 0 0 15464 28335372.0 1.0 0 0.0 2 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 15 -1 + 98.197 0.0 0.0 5.5768 5.5768 81.103 0.0 0.0 0.0 6.94537812595911 7.617608341954735 6.94537812595911 6.94537812595911 0 0.7302046884880937 1.6989700043360187 0.7059771852360797 1.274227503252014 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]AQQNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQGGA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QNA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ][KC]EQQNA{M(Oxidation (M))|F}YQ[{I|L}V];[KA][YC(Carbamidomethyl (C))]EQQNA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]AQQNA{M(Oxidation (M))|F}Y[AG][{I|L}V];[YQ]V[CS]AQQGGA{M(Oxidation (M))|F}YQ[{I|L}V] 5.5768;5.1823;5.0639;5.0639;5.0639;5.0639;4.9024;4.7219;4.6694;4.6694 -;-;-;-;-;-;-;-;-;- 1449 1 1.064 43859.5 1.0 10545 4919 15464 HBL1_DMSO_200M_050219_2,15466 HBL1_DMSO_200M_050219_2,15466, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15467 81.369 29.0 2168500.0 25 0 304330.0 + 2865 AVDLTLPKV 9 76 478.29491773202767 954.5752825308554 2 478.2952453494072 MULTI CID FTMS 0 0 0 15464 1641972.75 0.9521826191313596 1 -0.0901870727539062 3 Unmodified _AVDLTLPKV_ ENSG00000196419|ENST00000360079|XRCC6;ENST00000478914.1_1_22:42052971-42057696:+|nuORF;ENST00000518193.1_1_8:63767865-63768189:-|nuORF;nc|ENSG00000196419|P12956-2|XRCC6 32.78568957990786 0.1150597335874693 4 {[VA]|[{I|L}G]}D{I|L}T{I|L}PKV 9 0 + 65.221 0.0 0.0 6.8325 6.8325 87.15 0.0 0.0 0.0 24.074547923943925 8.33668578233474 8.33668578233474 8.33668578233474 0 0.5 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}D{I|L}T{I|L}PKV;{[VA]|[{I|L}G]}D{I|L}T{I|L}V[KP] 6.8325;5.9591 +;- + 234 + 1 1.064 54101.7 1.0 10546 4919 15464 HBL1_DMSO_200M_050219_2,15467 HBL1_DMSO_200M_050219_2,15467,AVDLTLPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15468 81.37 28.0 2110200.0 25 0 303040.0 + 28871 QALEVLKI 8 77 457.2894158362488 912.5642787392976 2 457.2896301150322 MULTI CID FTMS 0 0 0 15464 1615508.0 1.0 0 0.0 4 Unmodified _QALEVLKI_ ENSG00000124217|ENST00000244051|MOCS3 44.40701690623563 0.1655546087385432 4 EV{I|L}K{I|L} 5 3 32.652 0.0 0.0 3.578 0.0 0.0 312.1792709614669 0.0 312.1792709614669 0.0 17.21848749616356 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.2742275032520141 + EV{I|L}K{I|L} 3.578 + + 125 + 1 1.064 52541.6 1.0 10547 4919 15464 HBL1_DMSO_200M_050219_2,15468 HBL1_DMSO_200M_050219_2,15468,QALEVLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15469 81.372 53.0 926630.0 25 0 69620.0 + 11622 GLAGCPHIWGQ 11 85 569.7742857862625 1137.5340186393248 2 569.7747680544853 MULTI CID FTMS 0 0 0 15464 1160523.5 1.0 0 0.0 5 Unmodified _GLAGCPHIWGQ_ REV__ENST00000262370.11_1_16:4740157-4740412:+|nuORF 10.073929032068715 0.8255972128077141 4 [DP]{I|L}Y{M(Oxidation (M))|F}ED 7 -1 31.726 0.0 0.0 2.789 0.0 0.0 0.0 255.14214787199984 255.14214787199984 16.660050541291902 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [DP]{I|L}Y{M(Oxidation (M))|F}ED 2.789 - 307 1 1.064 42944.2 1.0 10548 4919 15464 HBL1_DMSO_200M_050219_2,15469 HBL1_DMSO_200M_050219_2,15469,GLAGCPHIWGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15470 81.373 67.0 1536000.0 25 0 258830.0 + 9915 FPFYGKPMRI 10 66 419.2266078236951 1254.6579940712852 3 419.2266723513603 MULTI CID FTMS 0 0 0 15464 864168.6875 0.1758257108742335 -9 0.9204940795898438 6 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 34.40172386719151 0.2166836008404837 4 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 68.409 0.0 0.0 5.4524 0.0 0.0 119.07409102607578 0.0 119.07409102607578 0.0 46.19070971708595 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.4524 - 364 1 1.064 88729.4 1.0 10549 4919 15464 HBL1_DMSO_200M_050219_2,15470 HBL1_DMSO_200M_050219_2,15470,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15471 81.375 54.0 625290.0 25 0 44030.0 + 15294 IPIQINVGTTV 11 74 577.8424764256706 1153.6703999181411 2 577.8427612185478 MULTI CID FTMS 0 0 0 15464 853220.5625 0.8531699588568153 1 -0.0901870727539062 7 Unmodified _IPIQINVGTTV_ ENSG00000204463|ENST00000676615|BAG6;ENST00000469182.1_1_6:31610750-31613330:-|nuORF;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 39.94969957227396 0.2131707853268865 4 [{I|L}P]Q{I|L}N{I|L}VG 8 5 51.86 0.0 0.0 4.4952 0.0 0.0 0.0 316.1468763187849 316.1468763187849 29.8430060173148 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P]Q{I|L}N{I|L}VG 4.4952 - 814 1 1.064 33064.7 1.0 10550 4919 15464 HBL1_DMSO_200M_050219_2,15471 HBL1_DMSO_200M_050219_2,15471,IPIQINVGTTV False True IPIQINVGTTV 81.374562 577.842761218548 25990472.0 15464.0 nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000204463|P46379-5|BAG6;;ENST00000469182.1_1_6:31610750-31613330:-|nuORF;;nc|ENSG00000204463|P46379-4|BAG6;;nc|ENSG00000204463|P46379-2|BAG6;;ENSG00000204463|ENST00000676615|BAG6 5.358490626017253 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15472 81.377 143.0 1280700.0 25 0 74120.0 + 10104 FPVCAMGMEV 10 153 542.2354551656142 1082.4563573980283 2 542.2360107302666 MULTI CID FTMS 0 0 0 15464 775770.6875 0.6439971899808498 6 -0.6181793212890625 8 Unmodified _FPVCAMGMEV_ chr19:50423755-50423930|11|71.82|0.0|14.28|+|1|TE_info:MIR,MIR_dup162234,MIR,SINE,acceptor,+,50423930,50424058|SPIB,None|1 23.1484247019978 0.4485954791219598 4 KE{I|L}{I|L}GPPTV 9 9 51.53 0.0 0.0 4.7605 0.0 0.0 129.88062605212832 0.0 129.88062605212832 0.0 18.170533162338373 0.0 0.0 0 1.385151878060192 0.0 0.6382104921644451 0.0 KE{I|L}{I|L}GPPTV 4.7605 - 1260 + 1 1.064 148725.3 1.0 10551 4919 15464 HBL1_DMSO_200M_050219_2,15472 HBL1_DMSO_200M_050219_2,15472,FPVCAMGMEV False True False False TE_chimeric_transcript PXD020620_cell_line HBL1_DMSO_200M_050219_2 15473 81.379 84.0 926360.0 25 0 155500.0 + 9305 FIFSDTHEL 9 69 554.7691446061873 1107.5237362791745 2 554.7692748904228 MULTI CID FTMS 0 0 0 15464 702640.125 0.7066699101627029 -1 0.1523056030273437 9 Unmodified _FIFSDTHEL_ ENSG00000102699|ENST00000381989|PARP4 32.30548876998284 0.1201446275138228 4 TDS{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6 6 29.13 0.0 0.0 2.6302 0.0 0.0 397.1969384640871 0.0 397.1969384640871 0.0 -1.847105889690969 -1.847105889690969 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 TDS{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 2.6302 - 338 1 1.064 64743.2 1.0 10552 4919 15464 HBL1_DMSO_200M_050219_2,15473 HBL1_DMSO_200M_050219_2,15473,FIFSDTHEL True True FIFSDTHEL 81.379335 554.769274890423 18512174.0 15464.0 ENSG00000102699|ENST00000381989|PARP4 6.200575351715088 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15474 81.381 83.0 1125800.0 25 0 142100.0 + 33401 SGVEVLVSV 9 81 888.5055403900099 887.4982639234098 1 888.5056640505791 MULTI CID FTMS 0 0 0 15464 639430.1875 0.2588813958935187 9 -0.97662353515625 10 Unmodified _SGVEVLVSV_ ENSG00000198695|ENST00000361681|MT-ND6 71.13359017698441 0.0206607516130725 4 [VS]GEV{I|L}VSV 9 2 + 74.377 0.0 0.0 8.3805 8.3805 79.504 0.0 0.0 0.0 0.4575749056067479 16.478174818886373 0.4575749056067479 0.4575749056067479 0 0.6747425010840047 0.0 2.079689690656103 0.0 [VS]GEV{I|L}VSV;{[QD]|[EN]|[WG]|[KD]|[RS]}EV{I|L}VSV;{NN|[MP]|[D{I|L}]|[EV]}GSV{I|L}VSV;[{I|L}V]SGD{I|L}VSV;[VS]GE{I|L}VVSV;{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}VVSV;[{I|L}V]DGS{I|L}VSV;[VS]G{I|L}D{I|L}VSV;[VS]GEV{I|L}SVV;{[QD]|[EN]|[WG]|[KD]|[RS]}EV{I|L}SVV 8.3805;8.329;7.8429;7.652;7.5901;7.5385;7.3128;7.1144;7.1144;7.0628 -;-;-;-;-;-;-;-;-;- 3109 1 1.064 65968.0 1.0 10553 4919 15464 HBL1_DMSO_200M_050219_2,15474 HBL1_DMSO_200M_050219_2,15474,SGVEVLVSV True True SGVEVLVSV 81.381229 888.505664050579 21502728.0 15464.0 ENSG00000198695|ENST00000361681|MT-ND6 4.261176586151123 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15475 81.383 53.0 1165100.0 25 0 134740.0 + 28631 PVGWQYLQL 9 76 552.2953611867066 1102.576169440213 2 552.2975952029228 MULTI CID FTMS 0 0 0 15464 650789.0 0.6463897922718836 -1 0.1523056030273437 11 Unmodified _PVGWQYLQL_ REV__ENSG00000168016|ENST00000645898|TRANK1 21.74664581756881 0.2544899275067181 4 [Q{I|L}][RD]SM{I|L}Q{I|L} 9 -1 + 45.078 0.0 0.0 4.0884 4.0884 69.923 0.0 0.0 0.0 3.0102999566398125 16.478174818886373 3.0102999566398125 3.0102999566398125 0 0.3807196863200844 0.0 0.0 0.2396518287104437 [Q{I|L}][RD]SM{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[RN]SM{I|L}Q{I|L};[Q{I|L}][RD]SM{I|L}[AG]{I|L};[{I|L}P][YV]EE{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[RN]SM{I|L}[AG]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV][HA]{I|L}Q{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}V]EE{I|L}Q{I|L};[Q{I|L}][RD]SWW{I|L};[VP]YY[HA]{I|L}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}EE{[NV]|[RG]}Q{I|L} 4.0884;3.8154;3.2532;3.0056;2.9802;2.758;2.4849;1.728;1.677;1.5972 -;-;-;-;-;-;-;-;-;- 124 1 1.064 54369.5 1.0 10554 4919 15464 HBL1_DMSO_200M_050219_2,15475 HBL1_DMSO_200M_050219_2,15475,PVGWQYLQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15476 81.386 154.0 924040.0 25 0 96893.0 -1 VMAPRTLLL 9 144 515.3095738130168 1028.6045946928334 2 515.3099853396416 MULTI CID FTMS 0 0 0 15464 621237.5625 1.0 0 0.0 12 Oxidation (M) _VM(Oxidation (M))APRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 36.506200033944 0.094635877243972 4 V{M(Oxidation (M))|F}A 3 -1 34.876 0.0 0.0 3.3906 0.0 0.0 0.0 708.4430039528614 708.4430039528614 -7.197083546558325 0.0 -7.197083546558325 0.0 0 0.9247425010840048 0.4202164033831898 0.0 0.0 V{M(Oxidation (M))|F}A 3.3906 + + 894 + 1 1.064 112963.3 1.0 10555 4919 15464 HBL1_DMSO_200M_050219_2,15476 HBL1_DMSO_200M_050219_2,15476,VMAPRTLLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15477 81.388 83.0 939830.0 25 0 154390.0 + 33977 SLIGHLQTL 9 94 491.2902233712952 980.5658938093904 2 491.2901489138603 MULTI CID FTMS 0 0 0 15464 389572.4375 0.6351350001915648 -1 0.1523056030273437 13 Unmodified _SLIGHLQTL_ ENSG00000138166|ENST00000369583|DUSP5 60.07390631473393 0.0260411565414776 4 [H{I|L}]G{I|L}QTVT{I|L} 9 5 + 43.659 0.0 0.0 4.4524 4.4524 72.352 0.0 0.0 0.0 3.1779151273581263 0.1745889372945228 0.1745889372945228 3.521825181113627 0 0.6549471895720985 0.0 0.3252574989159953 0.5774509799928715 [H{I|L}]G{I|L}QTVT{I|L};{[HG]|PP}{I|L}{I|L}QTVT{I|L};[H{I|L}]GQ{I|L}TVT{I|L};[H{I|L}]G{I|L}QT{I|L}S{I|L};{[HG]|PP}{I|L}Q{I|L}TVT{I|L};{[QN]|[E{I|L}]|[KN]}HK{I|L}QT{I|L};{[QN]|[E{I|L}]|[KN]}HKAAVT{I|L};{[HG]|PP}{I|L}{I|L}QT{I|L}S{I|L};[H{I|L}]{I|L}GQTVT{I|L};[H{I|L}]GQ{I|L}T{I|L}S{I|L} 4.4524;4.0932;4.0466;3.9367;3.6874;3.68;3.6686;3.5776;3.5314;3.5309 -;-;-;-;-;-;-;-;-;- 776 1 1.064 63957.4 1.0 10556 4919 15464 HBL1_DMSO_200M_050219_2,15477 HBL1_DMSO_200M_050219_2,15477,SLIGHLQTL True True SLIGHLQTL 81.387543 491.29014891386 3997311.0 15464.0 ENSG00000138166|ENST00000369583|DUSP5 3.6240042050679526 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15478 81.392 214.0 649090.0 25 0 94371.0 + 32502 SALGYLHSL 9 144 480.76084568102783 959.5071384288556 2 480.7593871951103 MULTI CID FTMS 0 0 0 15464 344637.875 0.1972940172126695 -2 0.2410507202148437 14 Unmodified _SALGYLHSL_ ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1 61.357469665136826 0.0253304979873734 4 {[SA]|[TG]}{I|L}GY{I|L}HS{I|L} 9 0 + 62.885 0.0 0.0 6.5539 6.5539 78.253 0.0 0.0 0.0 22.376430167995863 2.218487496163561 2.218487496163561 2.218487496163561 0 0.7302046884880937 1.5228787452803376 1.2095083459089813 0.0 + + {[SA]|[TG]}{I|L}GY{I|L}HS{I|L};{[SA]|[TG]}{I|L}GY{I|L}HTV;{[SA]|[TG]}{I|L}[{M(Oxidation (M))|F}V][EP]VV;{[SA]|[TG]}{I|L}[HA][YV]S{I|L};{[SA]|[TG]}{I|L}[HA][YV]TV;{[SA]|[TG]}{I|L}[HA][YT]VV;{[SA]|[TG]}[{M(Oxidation (M))|F}V]{I|L}[EP]VV;[VG]AW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RP];[H{I|L}]Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RP];{[QV]|[N{I|L}]|[RA]|[KV]}W{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RP] 6.5539;6.3227;2.6937;2.62;2.3887;2.1056;1.4354;0.6064;0.57517;0.44496 +;-;-;-;-;-;-;-;-;- + 593 + 1 1.064 109025.0 1.0 10557 4919 15464 HBL1_DMSO_200M_050219_2,15478 HBL1_DMSO_200M_050219_2,15478,SALGYLHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15479 81.4 492.0 444660.0 25 0 102660.0 -1 0 149 892.4021812012528 1782.7898094693055 2 892.4055053591728 MULTI CID FTMS 0 0 0 15464 272296.09375 1.0 0 0.0 15 4 [QA]HDEA[YE][NG]{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 89.222 0.0 0.0 5.0046 5.0046 52.502 0.0 0.0 0.0 10.67223021599564 57.87369484078248 10.67223021599564 0.0 0 2.1989700043360187 0.0 0.3252574989159953 1.066901560044258 [QA]HDEA[YE][NG]{M(Oxidation (M))|F}YQV{I|L};[QA]HDEA[YE][NG]{M(Oxidation (M))|F}YKV{I|L};[QA]HDEA[KC][EC]{M(Oxidation (M))|F}YQV{I|L};[QA]HDEA[KC][EC]{M(Oxidation (M))|F}YKV{I|L};[QA]HDEA[C(Carbamidomethyl (C))H][HM]HAKV{I|L};[QA]HDEA[C(Carbamidomethyl (C))H][HM]HAQV{I|L};[QA]HDEA[NG][YE]{M(Oxidation (M))|F}YQV{I|L};[QA]HDEA[NG][YE]{M(Oxidation (M))|F}YKV{I|L};[QA]HDEA[YE]{[SA]|[TG]}DHAKV{I|L};[QA]HDEA[YE]{[SA]|[TG]}DHAQV{I|L} 5.0046;5.0046;4.737;4.737;4.6995;4.6995;4.6126;4.6126;4.5692;4.5692 -;-;-;-;-;-;-;-;-;- 8213 1 1.064 149824.3 1.0 10558 4919 15464 HBL1_DMSO_200M_050219_2,15479 HBL1_DMSO_200M_050219_2,15479, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15480 81.405 249.0 400110.0 25 0 14486.0 -1 0 110 600.5932454861799 1798.7579070587394 3 600.9275390505791 MULTI CID FTMS 0 0 0 15464 198200.484375 1.0 0 0.0 16 4 ED[C(Carbamidomethyl (C))S]A 5 -1 27.505 0.0 0.0 1.5291 0.0 0.0 1218.533924112253 0.0 1218.533924112253 0.0 7.304211212322009 0.0 0.0 0 0.6307196863200843 0.0 0.3494850021680094 0.0 ED[C(Carbamidomethyl (C))S]A 1.5291 - 224 1 1.064 81025.4 1.0 10559 4919 15464 HBL1_DMSO_200M_050219_2,15480 HBL1_DMSO_200M_050219_2,15480, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15481 81.416 636.0 282990.0 25 0 96812.0 -1 0 95 712.4245511540851 711.417274687485 1 712.4258911013603 MULTI CID FTMS 0 0 0 15464 178535.484375 0.550662282677653 1 -0.0901870727539062 17 4 {[QN]|[E{I|L}]|[KN]}{I|L}PQ{I|L} 6 -1 + 58.844 0.0 0.0 8.2714 8.2714 93.413 0.0 0.0 0.0 19.604546065625428 9.70983616588979 9.70983616588979 9.70983616588979 0 1.0629529932484498 1.3979400086720375 0.0 1.1382104921644451 {[QN]|[E{I|L}]|[KN]}{I|L}PQ{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}QP;{[QN]|[E{I|L}]|[KN]}{I|L}P[AG]{I|L};{[QN]|[E{I|L}]|[KN]}P{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}[AG]P;[QP]{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}AAVP;{[QN]|[E{I|L}]|[KN]}[RV]VP;[AG]P{I|L}{I|L}E{I|L};[{I|L}P]E{I|L}Q{I|L} 8.2714;6.9066;5.3474;4.8302;4.3179;3.5619;2.9122;1.9384;1.6451;1.5754 -;-;-;-;-;-;-;-;-;- 200 + 1 1.064 132564.4 1.0 10560 4919 15464 HBL1_DMSO_200M_050219_2,15481 HBL1_DMSO_200M_050219_2,15481, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15482 81.43 800.0 444150.0 25 0 47874.0 -1 0 196 358.7391251708024 715.4636974084048 2 358.7382079958916 MULTI CID FTMS 0 0 0 15464 169975.6875 0.3244214422190165 -3 0.3638992309570312 18 4 {M(Oxidation (M))|F}{I|L}{I|L}PKV 6 -1 + 39.632 0.0 0.0 5.5393 5.5393 78.29 0.0 0.0 0.0 6.944181675637502 4.586378490256493 4.586378490256493 4.586378490256493 0 0.3494850021680094 0.0 0.0 0.1803115997617927 {M(Oxidation (M))|F}{I|L}{I|L}PKV;{M(Oxidation (M))|F}{I|L}{I|L}PVK;{M(Oxidation (M))|F}{I|L}{I|L}VPK;{M(Oxidation (M))|F}{I|L}VKP{I|L};{M(Oxidation (M))|F}{I|L}V{I|L}PK 5.5393;4.8983;3.8576;3.8272;2.6764 -;-;-;-;- 343 + 1 1.064 278810.8 0.8600000143051147 10561 4919 15464 HBL1_DMSO_200M_050219_2,15482 HBL1_DMSO_200M_050219_2,15482, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15483 81.44 578.0 119190.0 25 0 7330.2 -1 RRCRRRRRRRR 11 80 870.5329467654228 0 870.5329467654228 PEAK CID FTMS 0 0 0 -1 0 19 Carbamidomethyl (C) _RRC(Carbamidomethyl (C))RRRRRRRR_ ENST00000550735.6_1_12:112280040-112280175:+|nuORF 0.0 0.4761840153648598 4 TA{I|L}SA{I|L} 6 -1 34.24 0.0 0.0 1.9689 0.0 0.0 986.6086658923706 193.09914575748283 1179.7078116498535 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6861818737241734 0.0 TA{I|L}SA{I|L} 1.9689 - 1409 + 1 1.064 52703.4 1.0 10562 4919 15464 HBL1_DMSO_200M_050219_2,15483 HBL1_DMSO_200M_050219_2,15483,RRCRRRRRRRR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15484 81.452 630.0 222860.0 25 0 10126.0 + 30668 RFPEELTQTF 10 155 634.3192248256998 1266.6238967181996 2 634.3188354372978 MULTI CID FTMS 0 0 0 15464 139874.65625 0.3109322837004256 -16 1.6979751586914062 20 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 33.4449034751529 0.2267874087365337 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DT[TP]{I|L}TQT{M(Oxidation (M))|F} 11 5 + 71.96 0.0 0.0 5.6812 5.6812 74.216 0.0 0.0 0.0 6.277284585534886 16.57577319177794 6.277284585534886 1.804560644581315 0 0.9247425010840048 1.5228787452803376 0.805462187404089 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DT[TP]{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DQKKEQT{M(Oxidation (M))|F};[{I|L}A]D{I|L}[MD]{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DT{[VA]|[{I|L}G]}{I|L}EQT{M(Oxidation (M))|F};[{I|L}T]TP[MD]{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DT[TP]{I|L}T[AG]T{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DT[TP]{I|L}GATT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DT[TP]{I|L}QTT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[W{I|L}]{I|L}T[AG]T{M(Oxidation (M))|F} 5.6812;5.5388;5.3011;5.1856;5.0669;4.9626;4.9605;4.9173;4.8706;4.8152 -;-;-;-;-;-;-;-;-;- 5964 1 1.064 108491.3 1.0 10563 4919 15464 HBL1_DMSO_200M_050219_2,15484 HBL1_DMSO_200M_050219_2,15484,RFPEELTQTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15486 81.457 3.9 17044000.0 25 0 2009800.0 + 40992 VMAPRTLLL 9 66 507.31240759346935 1012.6102622537388 2 507.3127929568291 MULTI CID FTMS 0 0 0 15485 15981633.0 0.9482711602769334 1 -0.1006698608398437 1 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 36.506200033944 0.094635877243972 4 VMA 3 6 55.445 0.0 0.0 5.4755 0.0 0.0 0.0 708.4433323717424 708.4433323717424 19.457640437841874 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMA 5.4755 + + 30 + 1 1.058 55824.1 1.0 10564 4920 15485 HBL1_DMSO_200M_050219_2,15486 HBL1_DMSO_200M_050219_2,15486,VMAPRTLLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15487 81.458 4.7 16401000.0 25 0 1447400.0 + 44941 YPPWPGKIV 9 94 528.7980860103809 1055.5816190875616 2 528.7978393435478 MULTI CID FTMS 0 0 0 15485 11401846.0 1.0 0 0.0 2 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 42.09456458481378 0.0639583784996157 4 YPPWP 5 4 60.846 0.0 0.0 5.7642 0.0 0.0 0.0 412.25840173892817 412.25840173892817 39.37575861282205 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.0 0.0 + YPPWP 5.7642 + + 146 + 1 1.058 67424.0 1.0 10565 4920 15485 HBL1_DMSO_200M_050219_2,15487 HBL1_DMSO_200M_050219_2,15487,YPPWPGKIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15488 81.459 13.0 5906700.0 25 0 477930.0 + 35589 STTVTLFKV 9 107 498.29291355180845 994.5712741704168 2 498.2928649783134 MULTI CID FTMS 0 0 0 15485 4992687.0 0.8910880433403279 1 -0.1006698608398437 3 Unmodified _STTVTLFKV_ nc|ENSG00000211899|P01871|IGHM 62.57269311338072 0.0246576765497938 4 {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV 9 0 + 55.761 0.0 0.0 5.6065 5.6065 87.833 0.0 0.0 0.0 26.107219586328554 11.271211393095244 11.271211393095244 21.49288766643713 0 0.6421590589602533 0.0 0.2742275032520141 0.2396518287104437 + + {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV;{[MG]|[TS]}T{I|L}{I|L}S{M(Oxidation (M))|F}KV;{[MG]|[TS]}TV[{I|L}P]{I|L}[PA]P;{[MG]|[TS]}TV[{I|L}P][PA]{I|L}P;{[MG]|[TS]}TV[{I|L}P][PA]P{I|L};{[MG]|[TS]}T{I|L}{I|L}[YK]AV;{[MG]|[TS]}T{I|L}{I|L}[YK]G{I|L} 5.6065;3.4455;2.0176;1.6733;0.97055;0.8775;0.61645 +;-;-;-;-;-;- + 381 + 1 1.058 65673.8 1.0 10566 4920 15485 HBL1_DMSO_200M_050219_2,15488 HBL1_DMSO_200M_050219_2,15488,STTVTLFKV True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 15489 81.46 48.0 2957700.0 25 0 386290.0 18814 LARLELELK 9 99 542.8396147632048 1083.6646765932096 2 542.8401977419853 MULTI CID FTMS 0 0 0 15485 1995216.125 0.4401455091380413 -1 0.0901870727539062 4 Unmodified _LARLELELK_ ENSG00000021776|ENST00000156471|AQR 49.55428908609986 0.0413471690215031 4 VV[RD]{I|L}{I|L}EK{I|L} 9 6 + 65.542 0.0 0.0 6.0482 6.0482 78.488 0.0 0.0 0.0 6.478174818886373 14.973024840566469 6.478174818886373 3.252574989159953 0 1.0114393726401687 1.0457574905606752 0.0 1.086696871556164 VV[RD]{I|L}{I|L}EK{I|L};VV{I|L}[RD]{I|L}EK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KP]{I|L}{I|L}EK{I|L};VV[DV]G{I|L}{I|L}TR{I|L};[{I|L}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}EK{I|L};VV{I|L}V{[RE]|[WV]}EK{I|L};[{I|L}V]V[RD]{I|L}EK{I|L};[{I|L}V]{[CP]|[EA]}G{I|L}{I|L}TR{I|L};VV{I|L}V[DG]{I|L}TR{I|L};VV[RD]{I|L}{I|L}T[VG]{I|L} 6.0482;5.748;5.4503;5.2448;5.0831;4.9682;4.783;4.2798;4.1985;4.1774 -;-;-;-;-;-;-;-;-;- 537 1 1.058 111716.0 1.0 10567 4920 15485 HBL1_DMSO_200M_050219_2,15489 HBL1_DMSO_200M_050219_2,15489,LARLELELK True True RAIELLEKL 81.460482 542.840197741985 28281704.0 15485.0 ENSG00000148943|ENST00000278193|LIN7C;;ENSG00000111052|ENST00000552864|LIN7A 1.485689123471578 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15490 81.462 50.0 1584600.0 25 0 256750.0 1904 ALYSDRSI 8 86 462.7437540417929 923.4729551503858 2 462.7438232302666 MULTI CID FTMS 0 0 0 15485 1296702.625 0.4915800454616794 6 -0.6198272705078125 5 Unmodified _ALYSDRSI_ ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5 13.50788311687929 0.7113601687236069 4 [{I|L}A]P 3 6 34.705 0.0 0.0 3.7581 0.0 0.0 0.0 639.2774650305668 639.2774650305668 22.715299873086607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P 3.7581 - 22 + 1 1.058 63903.4 1.0 10568 4920 15485 HBL1_DMSO_200M_050219_2,15490 HBL1_DMSO_200M_050219_2,15490,ALYSDRSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15491 81.463 56.0 1611000.0 25 0 137090.0 + + -1 SPLDIYPKI 9 100 523.3030805482477 1044.5916081632954 2 523.3011352419853 MULTI CID FTMS 0 0 0 15485 1275834.75 0.6418562058391577 10 -1.140106201171875 6 Oxidation (M) _SPIVELLKM(Oxidation (M))_ ENST00000588652.5_1_19:45854889-45860860:-|nuORF;ENSG00000104884|ENST00000391945|ERCC2;ENST00000391942.6_1_19:45854889-45865127:-|nuORF 39.94969957227396 0.0757326808254658 4 SP{I|L}D{I|L}YPK{I|L} 9 -1 + 108.72 0.0 0.0 10.408 10.408 96.882 0.0 0.0 0.0 59.39001916450927 12.98332479720628 12.98332479720628 14.771212547196626 0 2.1861818737241734 2.0 0.3494850021680094 0.0 SP{I|L}D{I|L}YPK{I|L};SP{I|L}D{I|L}Y{I|L}[KP];S{I|L}PD{I|L}YPK{I|L};S{I|L}PD{I|L}Y{I|L}[KP];SP{I|L}{I|L}H[HT]K{I|L};S{I|L}P{I|L}H[HT]K{I|L} 10.408;8.994;8.038;6.6239;5.5518;3.1817 -;-;-;-;-;- 622 + 1 1.058 77147.1 1.0 10569 4920 15485 HBL1_DMSO_200M_050219_2,15491 HBL1_DMSO_200M_050219_2,15491,SPIVELLKM False False SPLDIYPKI 81.463249 523.301135241985 32097696.0 15485.0 ENST00000588652.5_1_19:45854889-45860860:-|nuORF;;ENSG00000104884|ENST00000391945|ERCC2;;ENST00000391942.6_1_19:45854889-45865127:-|nuORF 4.670323530832927 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15492 81.465 60.0 1549100.0 25 0 175280.0 + 8688 EVITKFINV 9 111 531.8129399624711 1061.611326991742 2 531.8135864138603 MULTI CID FTMS 0 0 0 15485 1160488.25 0.2002316965585163 -2 0.24249267578125 7 Unmodified _EVITKFINV_ ENSG00000152689|ENST00000403687|RASGRP3;nc|ENSG00000152689|Q8IV61-2|RASGRP3 65.23502041540118 0.0231836506122253 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[PA]KE{I|L} 8 5 51.133 0.0 0.0 4.8165 0.0 0.0 0.0 179.08342920474846 179.08342920474846 21.70855164054728 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.6747425010840047 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[PA]KE{I|L} 4.8165 - 1990 + 1 1.058 78933.1 1.0 10570 4920 15485 HBL1_DMSO_200M_050219_2,15492 HBL1_DMSO_200M_050219_2,15492,EVITKFINV True True EVITKFINV 81.464745 531.81358641386 82605360.0 15485.0 ENSG00000152689|ENST00000403687|RASGRP3;;nc|ENSG00000152689|Q8IV61-2|RASGRP3;;chr2:33524052-33524435|11|17.0|0.18|6.57|+|0|RASGRP3,None|1 6.256474494934082 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15493 81.467 119.0 1141900.0 25 0 163850.0 + 9219 FGIDLDTRV 9 102 518.2766741301873 1034.5387953271745 2 518.2774536013603 MULTI CID FTMS 0 0 0 15485 831700.75 0.2856361171896928 2 -0.1997909545898437 8 Unmodified _FGIDLDTRV_ ENSG00000033050|ENST00000287844|ABCF2;ENST00000465687.1_1_3:88367275-88367665:+|nuORF;nc|ENSG00000285292|Q9UG63-2|ABCF2 41.95555342248728 0.0647214845423414 4 {M(Oxidation (M))|F}G{I|L}D{I|L}DRS{I|L} 9 3 + 83.822 0.0 0.0 8.1024 8.1024 82.189 0.0 0.0 0.0 8.802112417116064 2.011590756708941 2.011590756708941 2.011590756708941 0 1.66944517631652 0.0 0.7742275032520141 0.0 {M(Oxidation (M))|F}G{I|L}D{I|L}DRS{I|L};{M(Oxidation (M))|F}VAVSV{I|L}DW;{M(Oxidation (M))|F}VAD{I|L}DVTR;{M(Oxidation (M))|F}VAVSVD{I|L}W;{M(Oxidation (M))|F}G{I|L}VEDRS{I|L};{M(Oxidation (M))|F}G{I|L}DVERS{I|L};{M(Oxidation (M))|F}VAVEDVTR;{M(Oxidation (M))|F}VAD{I|L}V[VS]W;{M(Oxidation (M))|F}VADVEVTR;{M(Oxidation (M))|F}G{I|L}D{I|L}DVTR 8.1024;7.9079;7.8803;7.7343;7.6961;7.6412;7.4741;7.4408;7.4192;7.397 -;-;-;-;-;-;-;-;-;- 1848 + 1 1.058 108631.0 1.0 10571 4920 15485 HBL1_DMSO_200M_050219_2,15493 HBL1_DMSO_200M_050219_2,15493,FGIDLDTRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15494 81.469 88.0 1049200.0 25 0 108580.0 + 3352 AYPEIVAVY 9 107 512.7709309075278 1023.5273088818556 2 512.7709228396416 MULTI CID FTMS 0 0 0 15485 755661.5 0.5018107895314625 -3 0.33123779296875 9 Unmodified _AYPEIVAVY_ ENSG00000178295|ENST00000381254|GEN1 28.486842064014134 0.1687311288560894 4 [EP]{I|L}VAAYVY 9 4 + 53.632 0.0 0.0 5.24 5.24 73.84 0.0 0.0 0.0 17.117452940205915 25.295323970144032 17.117452940205915 2.768024924119672 0 0.8935078169319297 0.8860566476931632 0.3494850021680094 0.0 [EP]{I|L}VAAYVY;[EP]{I|L}G{I|L}AYVY;[EP]{I|L}VAYAVY;[EP]{I|L}AVAYVY;[EP]{I|L}G{I|L}YAVY;[EP]{I|L}AVYAVY;[EP]{I|L}AYVAVY;{[VA]|[{I|L}G]}[EP]{I|L}AYVY;[EP]{I|L}AYG{I|L}VY;{[VA]|[{I|L}G]}[EP]{I|L}YAVY 5.24;4.9695;4.9458;4.7738;4.6754;4.4797;3.6721;3.4002;3.1405;3.1061 -;-;-;-;-;-;-;-;-;- 691 1 1.058 79454.0 1.0 10572 4920 15485 HBL1_DMSO_200M_050219_2,15494 HBL1_DMSO_200M_050219_2,15494,AYPEIVAVY False True AYPEIVAVY 81.469197 512.770922839642 43989704.0 15485.0 ENSG00000178295|ENST00000381254|GEN1 3.833287159601847 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15495 81.472 159.0 1177800.0 25 0 186900.0 + -1 GAIQVLPKL 9 124 470.7263908802107 939.4382288272216 2 470.7265502810478 MULTI CID FTMS 0 0 0 15485 711812.1875 0.223751425632569 -21 2.2889556884765625 10 Carbamidomethyl (C) _IASVC(Carbamidomethyl (C))YLD_ nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2 26.34127834903884 0.4900704351052977 4 {I|L}A{I|L} 3 -1 46.995 0.0 0.0 5.0024 0.0 0.0 0.0 639.2108715782468 639.2108715782468 23.230617724838865 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}A{I|L} 5.0024 - 221 + 1 1.058 147947.2 1.0 10573 4920 15485 HBL1_DMSO_200M_050219_2,15495 HBL1_DMSO_200M_050219_2,15495,IASVCYLD False False GAIQVLPKL 81.472328 470.726550281048 8817194.0 15485.0 nc|ENSG00000069424|Q13303-4|KCNAB2;;nc|ENSG00000069424|Q13303-2|KCNAB2;;ENSG00000069424|ENST00000378083|KCNAB2;;nc|ENSG00000069424|Q13303|KCNAB2 0.0974419116973877 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15496 81.48 420.0 1185800.0 25 0 368160.0 + 44942 YPPWPGKIV 9 98 1056.5871536757968 1055.5798772091969 1 1056.588671863079 MULTI CID FTMS 0 0 0 15485 541180.0 1.0 0 0.0 11 Unmodified _YPPWPGKIV_ ENSG00000140632|ENST00000321919|GLYR1;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 64.23631603340823 0.0237365939569086 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PWPGK{I|L}V 9 0 + 70.918 0.0 0.0 6.7184 6.7184 87.008 0.0 0.0 0.0 14.459406196379447 28.84311564696993 14.459406196379447 8.807196863200843 0 1.6861818737241734 1.6989700043360187 0.8807196863200843 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PWPGK{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WPPGK{I|L}V;[WP]YPPGK{I|L}V;[WP]PYPGK{I|L}V;[KG][DG]WPGK{I|L}V;[WP]P[KG]PY{I|L}V;[WP][KG]PPY{I|L}V;[KG]PWPPY{I|L}V;[KG]P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGK{I|L}V;[PG]KWPPY{I|L}V 6.7184;5.8841;4.7699;4.6515;3.8559;3.5865;3.4196;3.4143;3.2137;3.2042 +;-;-;-;-;-;-;-;-;- + 1463 1 1.058 317464.8 1.0 10574 4920 15485 HBL1_DMSO_200M_050219_2,15496 HBL1_DMSO_200M_050219_2,15496,YPPWPGKIV True True YPPWPGKIV 81.479851 1056.58867186308 580695105.0 15485.0 nc|ENSG00000140632|Q49A26-5|GLYR1;;nc|ENSG00000140632|Q49A26-3|GLYR1;;ENST00000587875.1_1_16:4882642-4897278:-|nuORF;;ENSG00000140632|ENST00000321919|GLYR1;;nc|ENSG00000140632|Q49A26-2|GLYR1 7.64662488301595 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15497 81.484 195.0 800390.0 25 0 131030.0 -1 ALLETYCA 8 102 314.15345579277783 939.4385379785336 3 314.1530639529228 MULTI CID FTMS 0 0 0 15485 544958.1875 0.2763092931719496 12 -1.3362579345703125 12 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 26.88365393820708 0.4786498634179528 4 A{I|L}S 3 -1 49.565 0.0 0.0 5.276 0.0 0.0 0.0 665.2637747637691 665.2637747637691 39.38756862884127 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.3807196863200844 0.0 A{I|L}S 5.276 - 42 + 1 1.058 129450.4 1.0 10575 4920 15485 HBL1_DMSO_200M_050219_2,15497 HBL1_DMSO_200M_050219_2,15497,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15498 81.486 136.0 765850.0 25 0 74308.0 + 21761 LPMLELKPV 9 90 520.3138957231034 1038.6132385130068 2 520.3149902224541 MULTI CID FTMS 0 0 0 15485 500003.875 0.6208447955915395 7 -0.7793807983398438 13 Unmodified _LPMLELKPV_ REV__ENSG00000149743|ENST00000317459|TRPT1;REV__ENST00000536158.5_1_11:63991868-63992278:-|nuORF;REV__ENST00000539436.5_1_11:63991868-63992452:-|nuORF;REV__nc|ENSG00000149743|Q86TN4-2|TRPT1;REV__nc|ENSG00000149743|Q86TN4-3|TRPT1;REV__nc|ENSG00000149743|Q86TN4-4|TRPT1 26.88365393820708 0.1891292719743517 4 {I|L}PPE{I|L}{I|L}MKV 9 -1 + 86.329 0.0 0.0 8.3119 8.3119 97.778 0.0 0.0 0.0 36.60875485731461 13.46787486224656 13.46787486224656 60.41570352387368 0 1.3494850021680094 2.0 0.0 0.2302046884880938 {I|L}PPE{I|L}{I|L}MKV;{I|L}[{I|L}T]K{M(Oxidation (M))|F}{I|L}S{[MS]|[{M(Oxidation (M))|F}A]};{I|L}[{I|L}T]K{I|L}{M(Oxidation (M))|F}S{[MS]|[{M(Oxidation (M))|F}A]};{I|L}[{I|L}T]KE[HV]TV;{I|L}[{I|L}T]K{I|L}[HD]TV;{I|L}[{I|L}T][VG]{M(Oxidation (M))|F}YKV;{I|L}[{I|L}T]KE[HV]S{I|L};{I|L}[{I|L}T]K{I|L}[HD]S{I|L};{I|L}[{I|L}T]RT[HV]TV;{I|L}[{I|L}T]RT[HV]S{I|L} 8.3119;2.495;1.5622;1.5063;1.4419;1.3626;0.9825;0.91804;0.62569;0.10185 -;-;-;-;-;-;-;-;-;- 665 + 1 1.058 91454.7 1.0 10576 4920 15485 HBL1_DMSO_200M_050219_2,15498 HBL1_DMSO_200M_050219_2,15498,LPMLELKPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15499 81.495 469.0 587550.0 25 0 94593.0 + 32611 SAWSGAPMI 9 143 919.4321976826566 918.4249212160564 1 919.4338867068292 MULTI CID FTMS 0 0 0 15485 407815.9375 0.4576523313630251 2 -0.1997909545898437 14 Unmodified _SAWSGAPMI_ ENSG00000146909|ENST00000275820|NOM1;ENST00000472491.1_1_7:156754865-156756721:+|nuORF;ENST00000475176.1_1_7:156754853-156755974:+|nuORF 88.90359156742426 0.0153595091083554 4 {[WS]|[C(Carbamidomethyl (C)){I|L}]}AGSAPM{I|L} 9 3 + 64.745 0.0 0.0 7.0495 7.0495 76.209 0.0 0.0 0.0 2.946466953830111 16.478174818886373 2.946466953830111 0.2506781661521131 0 1.774227503252014 0.721246399047171 1.6936726795685342 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}AGSAPM{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}ASGAPM{I|L};{[QS]|[NT]}SAWPM{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SGSAPM{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SSGAPM{I|L};{[QS]|[NT]}SWAPM{I|L};[{I|L}A]C(Carbamidomethyl (C))GSAPM{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}QSAPM{I|L};{[SA]|[TG]}GSAWPM{I|L};[{I|L}A]C(Carbamidomethyl (C))SGAPM{I|L} 7.0495;7.0223;6.7287;6.6975;6.6702;6.6219;6.5489;6.5387;6.5376;6.5216 -;-;-;-;-;-;-;-;-;- 2720 1 1.058 177706.7 1.0 10577 4920 15485 HBL1_DMSO_200M_050219_2,15499 HBL1_DMSO_200M_050219_2,15499,SAWSGAPMI True True SAWSGAPMI 81.494674 919.433886706829 10535647.0 15485.0 ENSG00000146909|ENST00000275820|NOM1;;ENST00000475176.1_1_7:156754853-156755974:+|nuORF;;ENST00000472491.1_1_7:156754865-156756721:+|nuORF 7.396769364674886 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15500 81.503 479.0 636010.0 25 0 82852.0 + 44090 YIYDKDMEII 10 161 651.8178817326284 1301.6212105320567 2 651.8186523318291 MULTI CID FTMS 0 0 0 15485 390648.9375 0.1365525320575112 -2 0.24249267578125 15 Unmodified _YIYDKDMEII_ ENSG00000124422|ENST00000261497|USP22;nc|ENSG00000124422|Q9UPT9-2|USP22 73.1962812333195 0.0188336640735478 4 [VG]SYDME{I|L}Y{I|L}{I|L} 11 7 + 83.388 0.0 0.0 6.4064 6.4064 81.231 0.0 0.0 0.0 4.202481488433648 4.577474076515244 4.202481488433648 4.202481488433648 0 0.3494850021680094 1.5228787452803376 2.450061205686631 0.0 [VG]SYDME{I|L}Y{I|L}{I|L};[Y{I|L}]YDKDME{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}YDME{I|L}Y{I|L}{I|L};[MD]EKDY{I|L}Y{I|L}{I|L};[Y{I|L}]DYKDME{I|L}{I|L};[Y{I|L}]D{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E{I|L}Y{I|L}{I|L};[MD]EK{I|L}DYY{I|L}{I|L};[VG]SYDMEY{I|L}{I|L}{I|L};[Y{I|L}]D[QP]DYY{I|L}{I|L};[VG]SDYME{I|L}Y{I|L}{I|L} 6.4064;6.0836;5.945;5.8529;5.7792;5.7684;5.7653;5.6514;5.6225;5.6121 -;+;-;-;-;-;-;-;-;- + 16886 1 1.058 239386.9 1.0 10578 4920 15485 HBL1_DMSO_200M_050219_2,15500 HBL1_DMSO_200M_050219_2,15500,YIYDKDMEII True True YIYDKDMEII 81.503153 651.818652331829 49423564.0 15485.0 ENSG00000124422|ENST00000261497|USP22;;nc|ENSG00000124422|Q9UPT9-2|USP22 5.600648880004883 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15501 81.514 620.0 434180.0 25 0 37564.0 1439 ALEEQHSL 8 208 309.49051870186247 925.4497267057876 3 309.4901306033134 MULTI CID FTMS 0 0 0 15485 311565.40625 0.8086485329938501 9 -1.0081787109375 16 Unmodified _ALEEQHSL_ ENSG00000153066|ENST00000283033|TXNDC11;nc|ENSG00000153066|Q6PKC3|TXNDC11 15.768221252438446 0.6779680726941459 4 {I|L}{M(Oxidation (M))|F} 2 7 16.454 0.0 0.0 1.7779 0.0 0.0 647.3034032172706 0.0 647.3034032172706 0.0 2.9180451402286582 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.7779 - 579 1 1.058 214190.0 1.0 10579 4920 15485 HBL1_DMSO_200M_050219_2,15501 HBL1_DMSO_200M_050219_2,15501,ALEEQHSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15502 81.523 538.0 306380.0 25 0 35063.0 + 45610 YVISEGFLKA 10 151 563.8110810446944 1125.6076091561888 2 563.8105346560478 MULTI CID FTMS 0 0 0 15485 304437.1875 0.3894576403016392 7 -0.7793807983398438 17 Unmodified _YVISEGFLKA_ ENSG00000006831|ENST00000357103|ADIPOR2 55.50274090549119 0.048383292844968 4 YV{I|L}SEG{M(Oxidation (M))|F}{I|L}[KA] 10 0 + 84.959 0.0 0.0 7.5478 7.5478 91.974 0.0 0.0 0.0 35.02697515943353 9.744689683626646 9.744689683626646 9.744689683626646 0 0.4247425010840047 2.0 0.3252574989159953 1.0114393726401687 + + YV{I|L}SEG{M(Oxidation (M))|F}{I|L}[KA];YV{I|L}SEG{M(Oxidation (M))|F}[KA]{I|L};[{I|L}V][HK]WS{I|L}P{M(Oxidation (M))|F};Y[W{I|L}]W{M(Oxidation (M))|F}{I|L}[KA];[K{I|L}][HV]WS{I|L}P{M(Oxidation (M))|F};[HK]V{I|L}WS{I|L}P{M(Oxidation (M))|F};Y[W{I|L}]W{M(Oxidation (M))|F}[KA]{I|L};{[QN]|[E{I|L}]|[KN]}[HK][C(Carbamidomethyl (C))K]{I|L}[KA];{[QN]|[E{I|L}]|[KN]}[HK]{I|L}{[MG]|[TS]}W{I|L};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C)){I|L}{I|L}[RV][HS] 7.5478;6.6821;2.6737;2.4797;2.4371;2.3976;1.6139;0.63107;0.36142;0.21456 +;-;-;-;-;-;-;-;-;- + 762 + 1 1.058 125558.6 1.0 10580 4920 15485 HBL1_DMSO_200M_050219_2,15502 HBL1_DMSO_200M_050219_2,15502,YVISEGFLKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15503 81.529 224.0 635520.0 25 0 52879.0 -1 YQRCKWEYQMI 11 128 782.3589450633284 1562.7033371934567 2 782.3663207888603 MULTI CID FTMS 0 0 0 15485 300240.1875 0.191951894100467 5 -0.5279922485351562 18 Oxidation (M) _YQRCKWEYQM(Oxidation (M))I_ ENST00000527531.5_1_11:108253785-108256679:-|nuORF 5.296884461304476 0.8501568894076437 4 [{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}ANQ[CS]C(Carbamidomethyl (C))V{I|L} 13 -1 + 53.519 0.0 0.0 3.4248 3.4248 46.982 0.0 0.0 0.0 2.8179876554632344 9.283900162466844 2.8179876554632344 0.0 0 0.5 0.0 0.0 0.805462187404089 [{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}ANQ[CS]C(Carbamidomethyl (C))V{I|L};[{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}ANQ[CS]VC(Carbamidomethyl (C)){I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[SG]{[NV]|[RG]};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}[YQ]{[NV]|[RG]};[KT]E[Y{M(Oxidation (M))|F}]ADQ[CS]VC(Carbamidomethyl (C)){I|L};[KT]E[Y{M(Oxidation (M))|F}]ADQ[CS]C(Carbamidomethyl (C))V{I|L};[{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}AN[AG][CS]VC(Carbamidomethyl (C)){I|L};[{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}ANQ[CS]V[CG]{I|L};[{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}ANE[C(Carbamidomethyl (C))K]C(Carbamidomethyl (C)){I|L};[{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}ANQ[CS][CG]V{I|L} 3.4248;3.4248;3.2445;3.0104;2.993;2.993;2.8442;2.8442;2.8442;2.8442 -;-;-;-;-;-;-;-;-;- 3915 + 1 1.058 104140.7 1.0 10581 4920 15485 HBL1_DMSO_200M_050219_2,15503 HBL1_DMSO_200M_050219_2,15503,YQRCKWEYQMI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15504 81.54 662.0 153360.0 25 0 36701.0 + 7771 ELFYRLLLSSL 11 145 677.3946198570956 1352.774686780991 2 677.3948242068291 MULTI CID FTMS 0 0 0 15485 233937.25 0.2033020900650404 6 -0.6198272705078125 19 Unmodified _ELFYRLLLSSL_ REV__MROH1|p.A944S|1|0.55|ENSG00000179832|chr8:144245219-144245219|G/T|missense_variant 3.2813086475875832 0.8596665074481906 4 {I|L} 1 -1 10.278 0.0 0.0 0.75974 0.0 0.0 1221.6792563384113 0.0 1221.6792563384113 0.0 1.1347561439641964 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.75974 + + 164 + 1 1.058 85907.8 1.0 10582 4920 15485 HBL1_DMSO_200M_050219_2,15504 HBL1_DMSO_200M_050219_2,15504,ELFYRLLLSSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15505 81.553 742.0 166660.0 25 0 15156.0 23734 LTVTHNRLQTL 11 135 648.3743747177733 1294.7341965023463 2 648.3737670779228 MULTI CID FTMS 0 0 0 15485 173992.4375 0.8536787979778218 -1 0.0901870727539062 20 Unmodified _LTVTHNRLQTL_ ENSG00000177595|ENST00000347755|PIDD1;ENST00000524486.5_1_11:803168-803522:-|nuORF;nc|ENSG00000177595|Q9HB75-2|PIDD1;nc|ENSG00000177595|Q9HB75-3|PIDD1 8.155526934196011 0.8366696279279818 4 [{I|L}T][HS]{I|L}{M(Oxidation (M))|F} 6 7 14.816 0.0 0.0 1.1444 0.0 0.0 0.0 593.3366540201705 593.3366540201705 3.5574053742762395 0.0 0.0 0.0 0 0.0 2.0 0.1171302707394362 0.0 [{I|L}T][HS]{I|L}{M(Oxidation (M))|F} 1.1444 - 663 1 1.058 100268.5 1.0 10583 4920 15485 HBL1_DMSO_200M_050219_2,15505 HBL1_DMSO_200M_050219_2,15505,LTVTHNRLQTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15507 81.557 41.0 1185100.0 25 0 136880.0 + 3967 DALQGFKI 8 76 446.2504227142664 890.4862924953328 2 446.2506896853447 MULTI CID FTMS 0 0 0 15506 1110278.25 0.4285215158449542 2 -0.2050704956054687 1 Unmodified _DALQGFKI_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 42.09456458481378 0.1992492688217789 4 {[DA]|[EG]}{I|L}QG{M(Oxidation (M))|F}K{I|L} 8 0 + 62.159 0.0 0.0 6.9804 6.9804 90.163 0.0 0.0 0.0 45.70570735618212 12.184290373512034 12.184290373512034 9.262137858390815 0 0.4247425010840047 1.6989700043360187 0.0 0.4247425010840047 + + {[DA]|[EG]}{I|L}QG{M(Oxidation (M))|F}K{I|L};{[DA]|[EG]}{I|L}[AG]G{M(Oxidation (M))|F}K{I|L} 6.9804;5.9403 +;- + 95 + 1 1.058 45817.6 1.0 10584 4921 15506 HBL1_DMSO_200M_050219_2,15507 HBL1_DMSO_200M_050219_2,15507,DALQGFKI False True DALQGFKI 81.557488 446.250689685345 43691982.0 15506.0 ENSG00000125870|ENST00000246071|SNRPB2;;ENST00000407763.2_1_6:149433147-149433330:-|nuORF;;ENSG00000077312|ENST00000243563|SNRPA 7.275181611378987 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15508 81.559 76.0 692130.0 25 0 41467.0 -1 0 78 845.8943788318276 1689.774204730455 2 845.8955566287041 MULTI CID FTMS 0 0 0 15506 851439.625 0.9054581249094412 1 -0.09912109375 2 4 {[QV]|[N{I|L}]|[RA]|[KV]}YCSQQNA{M(Oxidation (M))|F}Y 11 -1 103.57 0.0 0.0 6.1293 0.0 0.0 0.0 355.2000042089364 355.2000042089364 64.21357519342416 0.0 0.0 0.0 0 0.6139829889124311 1.5228787452803376 1.5044321917401078 2.1989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}YCSQQNA{M(Oxidation (M))|F}Y 6.1293 - 5481 1 1.058 42670.8 1.0 10585 4921 15506 HBL1_DMSO_200M_050219_2,15508 HBL1_DMSO_200M_050219_2,15508, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15509 81.56 1.7 41199000.0 25 0 3090600.0 + 3895 DALDKIRLI 9 90 528.8237779724682 1055.6330030117365 2 528.8243896365166 MULTI CID FTMS 0 0 0 15506 27572584.0 0.3094347729982871 -2 0.19085693359375 3 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 33.4449034751529 0.1114409586740657 4 DA{I|L}DK{I|L} 6 3 73.136 0.0 0.0 6.9282 0.0 0.0 0.0 397.2569979303344 397.2569979303344 44.20818753952375 0.0 0.0 0.0 0 1.1989700043360187 1.6989700043360187 0.0 0.0 + DA{I|L}DK{I|L} 6.9282 + + 86 + 1 1.058 60356.2 1.0 10586 4921 15506 HBL1_DMSO_200M_050219_2,15509 HBL1_DMSO_200M_050219_2,15509,DALDKIRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15510 81.562 34.0 3216100.0 25 0 291680.0 + 18935 LDADKILLR 9 109 352.88544868345866 1055.634516650576 3 352.8851501345634 MULTI CID FTMS 0 0 0 15506 1933902.75 0.2631049413633535 -1 0.1006698608398437 4 Unmodified _LDADKILLR_ ENSG00000081923|ENST00000648908|ATP8B1 34.40172386719151 0.1061884637610825 4 DA{I|L}DK{I|L}R{I|L}{I|L} 9 4 + 83.071 0.0 0.0 7.8693 7.8693 79.401 0.0 0.0 0.0 56.16995607673118 5.846755565910442 5.846755565910442 0.7918124604762511 0 0.3252574989159953 2.0 0.4247425010840047 0.4247425010840047 DA{I|L}DK{I|L}R{I|L}{I|L};DA{I|L}DK{I|L}{I|L}R{I|L};DA{I|L}D{I|L}KR{I|L}{I|L};DA{I|L}D{I|L}K{I|L}R{I|L};DA{I|L}{I|L}DKR{I|L}{I|L};DA{I|L}{I|L}DK{I|L}R{I|L};D{I|L}ADK{I|L}R{I|L}{I|L};D{I|L}ADK{I|L}{I|L}R{I|L};D{I|L}AD{I|L}KR{I|L}{I|L};D{I|L}AD{I|L}K{I|L}R{I|L} 7.8693;7.7943;7.299;7.224;6.6869;6.6119;6.5885;6.5135;6.0182;5.9432 -;-;-;-;-;-;-;-;-;- 265 + 1 1.058 95699.9 1.0 10587 4921 15506 HBL1_DMSO_200M_050219_2,15510 HBL1_DMSO_200M_050219_2,15510,LDADKILLR True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15511 81.564 87.0 1423200.0 25 0 205010.0 + 19673 LGLHLLRL 8 92 467.813618904195 933.61268487519 2 467.8138610720634 MULTI CID FTMS 0 0 0 15506 1205703.0 0.7423741289694051 -1 0.1006698608398437 5 Unmodified _LGLHLLRL_ REV__nc|ENSG00000094975|Q9UBS9-2|SUCO 67.03532852164291 0.116292309877964 4 HA{I|L}V{I|L}{I|L}R{I|L} 8 -1 + 95.104 0.0 0.0 10.187 10.187 89.185 0.0 0.0 0.0 25.24227503252014 5.0565842292838425 5.0565842292838425 5.0565842292838425 0 2.4049471895720984 1.6989700043360187 0.0 1.1861818737241734 HA{I|L}V{I|L}{I|L}R{I|L};HA{I|L}V{I|L}{I|L}{I|L}R;HA{I|L}{I|L}V{I|L}R{I|L};HA{I|L}{I|L}V{I|L}{I|L}R;H{I|L}AV{I|L}{I|L}R{I|L};{I|L}HAV{I|L}{I|L}R{I|L};H{I|L}AV{I|L}{I|L}{I|L}R;{I|L}HAV{I|L}{I|L}{I|L}R;[HA]{I|L}V{I|L}{I|L}R{I|L};H{I|L}A{I|L}V{I|L}R{I|L} 10.187;9.6451;9.0015;8.4599;7.5089;7.483;6.9673;6.9414;6.3303;6.3237 -;-;-;-;-;-;-;-;-;- 191 + 1 1.058 100290.7 1.0 10588 4921 15506 HBL1_DMSO_200M_050219_2,15511 HBL1_DMSO_200M_050219_2,15511,LGLHLLRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15512 81.565 59.0 1587600.0 25 0 100450.0 + 9911 FPFYGKPMRI 10 71 628.3361852914626 1254.657817649725 2 628.3371459841728 MULTI CID FTMS 0 0 0 15506 1082110.0 0.3960963583978213 -6 0.6634292602539062 6 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 47.74868867922204 0.0933642699623533 4 {I|L}M{M(Oxidation (M))|F}YGK 6 6 67.894 0.0 0.0 5.4113 0.0 0.0 0.0 512.2675419095768 512.2675419095768 33.429862658764264 0.0 0.0 0.0 0 1.674742501084005 1.6989700043360187 0.0 0.0 {I|L}M{M(Oxidation (M))|F}YGK 5.4113 - 475 + 1 1.058 76465.6 1.0 10589 4921 15506 HBL1_DMSO_200M_050219_2,15512 HBL1_DMSO_200M_050219_2,15512,FPFYGKPMRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15513 81.566 35.0 1948000.0 25 0 234710.0 + 33900 SLFPNSPKW 9 96 538.2811699394509 1074.5477869457018 2 538.2805663943291 MULTI CID FTMS 0 0 0 15506 1011337.6875 0.7035749902429828 -1 0.1006698608398437 7 Unmodified _SLFPNSPKW_ ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF 28.23362336080872 0.1719529537093671 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW 9 0 + 68.707 0.0 0.0 6.3941 6.3941 87.19 0.0 0.0 0.0 53.75524478413823 10.211484792255838 10.211484792255838 9.208187539523747 0 0.7742275032520141 2.0 0.3252574989159953 0.0 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]SPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNV{[NV]|[RG]}W;{[TV]|[{I|L}S]}W[TA]SPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGV{[NV]|[RG]}W;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]V{[NV]|[RG]}W;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[WP]ES{I|L};{[TV]|[{I|L}S]}W[TA]V{[NV]|[RG]}W;{[TV]|[{I|L}S]}W{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PKW 6.3941;5.5371;5.3732;4.8527;4.588;3.9958;3.8319;3.5149;3.3493;3.3281 +;-;-;-;-;-;-;-;-;- + 724 + 1 1.058 58522.3 1.0 10590 4921 15506 HBL1_DMSO_200M_050219_2,15513 HBL1_DMSO_200M_050219_2,15513,SLFPNSPKW False True SLFPNSPKW 81.566229 538.280566394329 22286126.0 15506.0 ENST00000531200.1_1_11:102398162-102401431:-|nuORF;;ENST00000533366.5_1_11:102395628-102401431:-|nuORF;;ENSG00000137673|ENST00000260227|MMP7 7.899515946706136 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15514 81.569 131.0 1022300.0 25 0 107080.0 + 3073 AVMEQIPEI 9 136 515.2675953142445 1028.520637695289 2 515.2683593630791 MULTI CID FTMS 0 0 0 15506 630364.0 0.435604589208548 -3 0.3431625366210937 8 Unmodified _AVMEQIPEI_ ENSG00000124571|ENST00000265351|XPO5;ENST00000455854.2_1_6:43491608-43492751:-|nuORF 46.020951573049366 0.0490941689151868 4 {[VA]|[{I|L}G]}MEQ{I|L}{I|L}[EP] 9 2 + 41.767 0.0 0.0 4.0608 4.0608 65.482 0.0 0.0 0.0 1.1978875828839364 0.7378621416091846 0.7378621416091846 0.7255998297264199 0 0.5 1.5228787452803376 0.0 0.4247425010840047 {[VA]|[{I|L}G]}MEQ{I|L}{I|L}[EP];{[VA]|[{I|L}G]}MEAG{I|L}{I|L}[EP];{[VA]|[{I|L}G]}MEAAV{I|L}[EP];[EP]{M(Oxidation (M))|F}QG{I|L}{I|L}[EP];[EP]{M(Oxidation (M))|F}QAV{I|L}[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}GA[HQ]{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VAA[HQ]{M(Oxidation (M))|F};{[VA]|[{I|L}G]}MEAA{I|L}V[EP];[TP][MT]Q{I|L}{I|L}[EP];[TP][CS]{I|L}AV{I|L}[EP] 4.0608;3.9903;3.9903;3.9444;3.9444;3.2153;3.2153;3.1172;2.9943;2.9238 -;-;-;-;-;-;-;-;-;- 1582 1 1.058 106127.9 1.0 10591 4921 15506 HBL1_DMSO_200M_050219_2,15514 HBL1_DMSO_200M_050219_2,15514,AVMEQIPEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15515 81.572 171.0 480780.0 25 0 71543.0 + 12689 GVLPNIQAV 9 100 455.771210605697 909.527868278194 2 455.7719299197197 MULTI CID FTMS 0 0 0 15506 553493.125 0.0175083038155796 8 -0.9075088500976562 9 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 24.67388899826682 0.2172451872415813 4 [NP]{I|L}QA 5 4 29.481 0.0 0.0 3.2413 0.0 0.0 0.0 383.2272983327254 383.2272983327254 5.835682082013776 0.0 0.0 0.0 0 0.0 0.6777807052660807 0.0 0.3494850021680094 + [NP]{I|L}QA 3.2413 + + 479 1 1.058 68282.0 1.0 10592 4921 15506 HBL1_DMSO_200M_050219_2,15515 HBL1_DMSO_200M_050219_2,15515,GVLPNIQAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15516 81.575 152.0 482030.0 25 0 25150.0 + 38323 TQLDLEDVQV 10 117 580.2964548715411 1158.578356809882 2 580.2972289919853 MULTI CID FTMS 0 0 0 15506 493403.6875 0.5975569260231356 1 -0.09912109375 10 Unmodified _TQLDLEDVQV_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 45.739877483867886 0.1051543674217965 4 DE{I|L}DPN{I|L} 7 8 53.652 0.0 0.0 4.6309 0.0 0.0 344.204234522459 0.0 344.204234522459 0.0 31.78025758832881 0.0 0.0 0 0.0 0.0 0.6989700043360187 1.1237125054200234 DE{I|L}DPN{I|L} 4.6309 - 3358 + 1 1.058 64165.8 1.0 10593 4921 15506 HBL1_DMSO_200M_050219_2,15516 HBL1_DMSO_200M_050219_2,15516,TQLDLEDVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15517 81.579 176.0 730280.0 25 0 74006.0 + 21043 LPADFGRLV 9 110 494.2840435809121 986.5535342286242 2 494.2846557497978 MULTI CID FTMS 0 0 0 15506 477404.0 0.6855685897621155 -1 0.1006698608398437 11 Unmodified _LPADFGRLV_ ENSG00000108829|ENST00000225972|LRRC59 45.69961567697781 0.0497987121815769 4 {I|L}PAD{M(Oxidation (M))|F}{[NV]|[RG]}V{I|L} 9 2 + 72.002 0.0 0.0 7.2984 7.2984 80.671 0.0 0.0 0.0 31.70696227168976 2.218487496163561 2.218487496163561 2.218487496163561 0 1.295114016114533 1.5228787452803376 0.0 0.0 {I|L}PAD{M(Oxidation (M))|F}{[NV]|[RG]}V{I|L};{I|L}PAD{M(Oxidation (M))|F}{[NV]|[RG]}{I|L}V;{I|L}PAD{M(Oxidation (M))|F}RR{I|L};{I|L}PW{M(Oxidation (M))|F}{[NV]|[RG]}V{I|L};{I|L}PAD{M(Oxidation (M))|F}[KS]P{I|L};{I|L}PW{M(Oxidation (M))|F}{[NV]|[RG]}{I|L}V;{I|L}PW{M(Oxidation (M))|F}RR{I|L};{I|L}PAD{M(Oxidation (M))|F}[KS]{I|L}P;{I|L}PW{M(Oxidation (M))|F}[KS]P{I|L};{I|L}PW{M(Oxidation (M))|F}[KS]{I|L}P 7.2984;7.0735;6.8977;6.3988;6.3072;6.1739;6.0051;5.5987;5.4076;4.6991 -;+;-;-;-;-;-;-;-;- + 263 + 1 1.058 104357.8 1.0 10594 4921 15506 HBL1_DMSO_200M_050219_2,15517 HBL1_DMSO_200M_050219_2,15517,LPADFGRLV True True LPADFGRLV 81.578675 494.284655749798 4404373.0 15506.0 ENSG00000108829|ENST00000225972|LRRC59 5.464152654012044 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15518 81.581 118.0 366160.0 25 0 30311.0 + 23185 LSRRMENTL 9 81 560.3015854213894 1118.5886179095787 2 560.3016235232353 MULTI CID FTMS 0 0 0 15506 389897.34375 0.0028788074481421 17 -1.8412551879882808 12 Unmodified _LSRRMENTL_ REV__ENSG00000187775|ENST00000389840|DNAH17 7.910154910731844 0.6385446671287552 4 [NS]AY{I|L}V 6 -1 25.406 0.0 0.0 2.2713 0.0 0.0 0.0 468.1935213678344 468.1935213678344 8.653565665482859 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NS]AY{I|L}V 2.2713 - 216 + 1 1.058 38077.3 1.0 10595 4921 15506 HBL1_DMSO_200M_050219_2,15518 HBL1_DMSO_200M_050219_2,15518,LSRRMENTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15519 81.586 290.0 413840.0 25 0 56079.0 + 16287 IVYPWMKKI 9 121 393.2314765039344 1176.6726001120032 3 393.2315246462822 MULTI CID FTMS 0 0 0 15506 329560.3125 1.0 0 0.0 13 Unmodified _IVYPWMKKI_ ENSG00000198353|ENST00000430889|HOXC4 34.10243960390752 0.1078313939113124 4 PWMKK{I|L} 6 3 25.935 0.0 0.0 2.2041 0.0 0.0 375.2137549364307 0.0 375.2137549364307 0.0 -0.0510474873355093 -0.0510474873355093 0.0 0 0.2302046884880938 0.0 0.0 0.4247425010840047 + PWMKK{I|L} 2.2041 + + 164 + 1 1.058 98790.0 1.0 10596 4921 15506 HBL1_DMSO_200M_050219_2,15519 HBL1_DMSO_200M_050219_2,15519,IVYPWMKKI True True IVYPWMKKI 81.586459 393.231524646282 3395697.75 15506.0 ENSG00000198353|ENST00000430889|HOXC4 5.231993357340495 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15520 81.597 606.0 356360.0 25 0 39757.0 -1 0 169 336.104633924523 670.194714915846 2 336.1048766970634 MULTI CID FTMS 0 0 0 15506 337514.65625 0.129106989950557 3 -0.3221206665039062 14 4 {I|L} 1 -1 8.4518 0.0 0.0 1.2611 0.0 0.0 539.099681201782 0.0 539.099681201782 0.0 0.2519992247436136 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2611 - 27 + 1 1.058 172947.8 1.0 10597 4921 15506 HBL1_DMSO_200M_050219_2,15520 HBL1_DMSO_200M_050219_2,15520, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15521 81.6 128.0 461520.0 25 0 60880.0 + 36157 SVVELVNKL 9 98 500.8055946636166 999.5966363940332 2 500.8051940798759 MULTI CID FTMS 0 0 0 15506 317314.4375 1.0 0 0.0 15 Unmodified _SVVELVNKL_ ENSG00000128335|ENST00000358502|APOL2 38.17557092003332 0.0854718145212029 4 [VS]VE{I|L}VNK{I|L} 9 0 + 75.921 0.0 0.0 7.5952 7.5952 90.995 0.0 0.0 0.0 54.49478448944497 12.887955392469692 12.887955392469692 9.208187539523747 0 1.1307196863200843 2.0 0.0 0.0 + + [VS]VE{I|L}VNK{I|L};[VS]VE{I|L}VGGK{I|L} 7.5952;6.674 +;- + 209 + 1 1.058 50136.5 1.0 10598 4921 15506 HBL1_DMSO_200M_050219_2,15521 HBL1_DMSO_200M_050219_2,15521,SVVELVNKL True True SVVELVNKL 81.599661 500.805194079876 1800235.0 15506.0 ENSG00000128335|ENST00000358502|APOL2 6.332679907480876 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15522 81.609 521.0 330750.0 25 0 44113.0 -1 FDGSVSCFCL 10 173 596.243420116891 1190.472287300582 2 596.2440673708916 MULTI CID FTMS 0 0 0 15506 302888.625 1.0 0 0.0 16 2 Carbamidomethyl (C) _FDGSVSC(Carbamidomethyl (C))FC(Carbamidomethyl (C))L_ ENST00000494204.1_1_X:24833141-24859977:+|nuORF 14.838274106304384 0.5985701837916485 4 VD{M(Oxidation (M))|F}D{I|L}SHD 8 -1 54.879 0.0 0.0 4.6099 0.0 0.0 0.0 259.0731587701648 259.0731587701648 22.197795421520063 0.0 0.0 0.0 0 0.899649864804614 2.0 0.0 0.0 VD{M(Oxidation (M))|F}D{I|L}SHD 4.6099 - 5990 + 1 1.058 127381.6 1.0 10599 4921 15506 HBL1_DMSO_200M_050219_2,15522 HBL1_DMSO_200M_050219_2,15522,FDGSVSCFCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15523 81.618 522.0 426180.0 25 0 27783.0 + 15604 IPYQDLPHL 9 199 548.2952846035856 1094.5760162739712 2 548.2957031130791 MULTI CID FTMS 0 0 0 15506 305739.0 0.1117421464967576 3 -0.3221206665039062 17 Unmodified _IPYQDLPHL_ ENSG00000074416|ENST00000265052|MGLL;ENST00000479967.5_1_3:127434467-127541990:-|nuORF;nc|ENSG00000074416|Q99685-2|MGLL;nc|ENSG00000074416|Q99685|MGLL 66.45667989310934 0.0225072657982126 4 {I|L}PYQD{I|L}PH{I|L} 9 0 + 88.711 0.0 0.0 8.1046 8.1046 95.325 0.0 0.0 0.0 50.46610120533788 12.587418566968154 12.587418566968154 17.703037561203843 0 1.569341519366547 1.3010299956639813 0.3252574989159953 0.8494850021680094 + + {I|L}PYQD{I|L}PH{I|L};{I|L}PY[AG]D{I|L}PH{I|L};{I|L}PYQ[WY]{I|L}{I|L};{I|L}PYQV{M(Oxidation (M))|F}C{I|L}{I|L};{I|L}PYQ[QA][KT]{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEV{I|L}PH{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QD{I|L}{I|L}PH{I|L};{I|L}PY[AG][WY]{I|L}{I|L};{I|L}PY[AG]V{M(Oxidation (M))|F}C{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QEVP{I|L}H{I|L} 8.1046;6.4872;5.2651;5.2317;4.5505;3.9952;3.7483;3.6428;3.6144;3.5385 +;-;-;-;-;-;-;-;-;- + 4958 + 1 1.058 173788.5 1.0 10600 4921 15506 HBL1_DMSO_200M_050219_2,15523 HBL1_DMSO_200M_050219_2,15523,IPYQDLPHL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15524 81.629 550.0 407190.0 25 0 82099.0 + 2825 AVACLEESLR 10 185 545.7822210911718 0 545.7823974490166 PEAK CID FTMS 0 0 0 15506 266691.375 0.2262977859520279 -3 0.3431625366210937 18 Unmodified _AVACLEESLR_ REV__ENST00000359878.7_1_2:201371790-201374470:-|nuORF 25.399314129420983 0.2547831343944559 4 VA{M(Oxidation (M))|F}{M(Oxidation (M))|F}TPS 7 -1 36.574 0.0 0.0 3.3568 0.0 0.0 186.1006837821497 151.05153833560783 337.1522221177576 0.0 0.0 0.0 0.0 0 0.5 0.0 1.9916440611282624 0.0 VA{M(Oxidation (M))|F}{M(Oxidation (M))|F}TPS 3.3568 - 2103 + 1 1.058 179445.2 1.0 10601 4921 15506 HBL1_DMSO_200M_050219_2,15524 HBL1_DMSO_200M_050219_2,15524,AVACLEESLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15525 81.641 671.0 369830.0 25 0 24087.0 + 19412 FWPPQPKLY 9 181 587.8143947223818 1173.6142365115636 2 588.3166992068291 MULTI CID FTMS 0 0 0 15506 198927.03125 0.0573979541232222 -7 0.7439117431640625 19 Unmodified _LETELLQEIS_ ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENSG00000177731|ENST00000327031|FLII;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 19.256988751693697 0.5244284437930726 4 Y 1 10 13.979 0.0 0.0 1.1911 0.0 0.0 992.5395275045308 0.0 992.5395275045308 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1911 - 1203 + 1 1.058 183887.3 1.0 10602 4921 15506 HBL1_DMSO_200M_050219_2,15525 HBL1_DMSO_200M_050219_2,15525,LETELLQEIS False False FWPPQPKLY 81.640561 588.316699206829 27552044.0 15506.0 ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;nc|ENSG00000177731|Q13045-2|FLII;;nc|ENSG00000177731|Q13045-3|FLII 6.396609942118327 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15526 81.652 683.0 148490.0 25 0 34511.0 23066 LSLLHREKNK 10 94 619.3714727851151 1236.72839263703 2 619.3716308474541 MULTI CID FTMS 0 0 0 15506 190447.125 0.648440735256752 -1 0.1006698608398437 20 Unmodified _LSLLHREKNK_ ENSG00000024526|ENST00000456315|DEPDC1 6.2057823575117 0.6979311171683138 4 {I|L} 1 9 10.596 0.0 0.0 0.85677 0.0 0.0 1105.633099523552 0.0 1105.633099523552 0.0 0.5072882037938875 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.85677 + + 41 + 1 1.058 80322.2 1.0 10603 4921 15506 HBL1_DMSO_200M_050219_2,15526 HBL1_DMSO_200M_050219_2,15526,LSLLHREKNK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15528 81.657 6.2 3978800.0 25 0 291860.0 -1 0 46 881.413916772189 1760.813280611178 2 881.4150878787041 MULTI CID FTMS 0 0 0 15527 8356063.0 0.294898651762892 3 -0.3282012939453125 1 4 VC(Carbamidomethyl (C)){I|L} 3 -1 18.416 0.0 0.0 1.0459 0.0 0.0 1370.6185612281686 0.0 1370.6185612281686 0.0 1.2493873660830026 0.0 0.0 0 0.0 0.0 0.0 0.0 VC(Carbamidomethyl (C)){I|L} 1.0459 - 48 + 1 1.054 25289.9 1.0 10604 4922 15527 HBL1_DMSO_200M_050219_2,15528 HBL1_DMSO_200M_050219_2,15528, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15529 81.658 4.9 7384200.0 25 0 1071100.0 -1 ALMAAPLSL 9 65 451.75274496202985 901.4909369908596 2 451.7529174685478 MULTI CID FTMS 0 0 0 15527 11336142.0 0.8728553770828901 7 -0.8083877563476562 2 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 66.092 0.0 0.0 7.3315 7.3315 85.142 0.0 0.0 0.0 17.469617958179242 9.889917747712644 9.889917747712644 4.771212547196626 0 0.6989700043360187 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};{[TV]|[{I|L}S]}[RD]D{I|L}A{I|L} 7.3315;6.8022;5.3936;4.8668;4.8643;4.3376;2.3997 -;-;-;-;-;-;- 100 1 1.054 35179.7 1.0 10605 4922 15527 HBL1_DMSO_200M_050219_2,15529 HBL1_DMSO_200M_050219_2,15529,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15530 81.659 20.0 3193300.0 25 0 558310.0 + 9916 FPFYGKPMRI 10 56 419.2266078236951 1254.6579940712852 3 419.2267333865166 MULTI CID FTMS 0 0 0 15527 2280610.75 0.4640182086511541 -6 0.6538772583007812 3 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 34.40172386719151 0.2166836008404837 4 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 67.612 0.0 0.0 5.3889 0.0 0.0 119.07409865547032 0.0 119.07409865547032 0.0 45.39381281052492 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.3889 - 175 1 1.054 56261.1 1.0 10606 4922 15527 HBL1_DMSO_200M_050219_2,15530 HBL1_DMSO_200M_050219_2,15530,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15531 81.66 46.0 1518000.0 25 0 264920.0 32503 SALGYLHSL 9 81 480.76084568102783 959.5071384288556 2 480.7611266970634 MULTI CID FTMS 0 0 0 15527 1463108.875 0.8375824263896114 1 -0.1059494018554687 4 Unmodified _SALGYLHSL_ ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1 52.268347100219714 0.0353964759249114 4 {[SA]|[TG]}{I|L}GY{I|L}{I|L}[HS] 9 2 + 64.83 0.0 0.0 6.7565 6.7565 78.911 0.0 0.0 0.0 24.13734275855269 2.124390693738789 2.124390693738789 2.124390693738789 0 0.7742275032520141 1.6989700043360187 1.5994850021680094 0.0 {[SA]|[TG]}{I|L}GY{I|L}{I|L}[HS];{[SA]|[TG]}{I|L}GY{I|L}HTV;{[SA]|[TG]}{I|L}GY{I|L}HS{I|L};{[SA]|[TG]}[{M(Oxidation (M))|F}V]S{I|L}{I|L}[HS];{[SA]|[TG]}[{M(Oxidation (M))|F}V]S{I|L}HTV;{[SA]|[TG]}[{M(Oxidation (M))|F}V]S{I|L}HS{I|L} 6.7565;6.5351;6.4974;4.3092;4.0878;4.05 -;-;+;-;-;- + 265 + 1 1.054 58777.8 1.0 10607 4922 15527 HBL1_DMSO_200M_050219_2,15531 HBL1_DMSO_200M_050219_2,15531,SALGYLHSL True True SAIGYLHSL 81.660223 480.761126697063 23808794.0 15527.0 nc|ENSG00000101049|Q9HBY8-3|SGK2;;nc|ENSG00000101049|Q9HBY8-1|SGK2;;ENSG00000101049|ENST00000373100|SGK2 0.4996106922626495 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15532 81.662 55.0 555750.0 25 0 47614.0 + 11623 GLAGCPHIWGQ 11 63 569.7742857862625 1137.5340186393248 2 569.7747680544853 MULTI CID FTMS 0 0 0 15527 1094386.375 0.9430109558315708 3 -0.3282012939453125 5 Unmodified _GLAGCPHIWGQ_ REV__ENST00000262370.11_1_16:4740157-4740412:+|nuORF 10.073929032068715 0.8255972128077141 4 [DP]{I|L}Y{M(Oxidation (M))|F} 5 -1 16.198 0.0 0.0 1.4239 0.0 0.0 0.0 499.2151382483125 499.2151382483125 4.521473440651569 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [DP]{I|L}Y{M(Oxidation (M))|F} 1.4239 - 54 1 1.054 29031.1 1.0 10608 4922 15527 HBL1_DMSO_200M_050219_2,15532 HBL1_DMSO_200M_050219_2,15532,GLAGCPHIWGQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15533 81.665 160.0 622510.0 25 0 77221.0 + 9306 FIFSDTHEL 9 104 554.7691446061873 1107.5237362791745 2 554.7692748904228 MULTI CID FTMS 0 0 0 15527 592123.75 0.5955197010954971 2 -0.2229995727539062 6 Unmodified _FIFSDTHEL_ ENSG00000102699|ENST00000381989|PARP4 32.30548876998284 0.1201446275138228 4 TDS{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6 6 28.689 0.0 0.0 2.5904 0.0 0.0 397.1963758237524 0.0 397.1963758237524 0.0 -0.6112061033247365 -0.6112061033247365 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 TDS{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 2.5904 - 545 1 1.054 80769.1 1.0 10609 4922 15527 HBL1_DMSO_200M_050219_2,15533 HBL1_DMSO_200M_050219_2,15533,FIFSDTHEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15534 81.672 375.0 636270.0 25 0 128050.0 + 31784 RSNFGYNIPL 10 131 590.8107086193163 1179.6068643054325 2 590.8092529177666 MULTI CID FTMS 0 0 0 15527 550081.1875 0.5318700886327372 -1 0.09912109375 7 Unmodified _RSNFGYNIPL_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000553665.5_1_14:58711638-58724717:+|nuORF;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;ENST00000555931.5_1_14:58714534-58727692:+|nuORF;ENST00000556321.1_1_14:58714534-58724570:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 27.22323531849824 0.3570408936368626 4 [{I|L}P]{M(Oxidation (M))|F}{M(Oxidation (M))|F}GYN{I|L}P{I|L} 10 3 + 50.513 0.0 0.0 4.2822 4.2822 80.441 0.0 0.0 0.0 8.58327228896922 26.43231088622951 8.58327228896922 11.524273408578871 0 0.9802046884880936 1.2218487496163564 0.0 0.7302046884880937 [{I|L}P]{M(Oxidation (M))|F}{M(Oxidation (M))|F}GYN{I|L}P{I|L};{[NV]|[RG]}[YQ]GYN{I|L}P{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YN]GYN{I|L}P{I|L};[YN]{[QV]|[N{I|L}]|[RA]|[KV]}GYN{I|L}P{I|L};[YN]G{[VA]|[{I|L}G]}GYN{I|L}P{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}VS[HQ]N{I|L}P{I|L};[{I|L}P]{M(Oxidation (M))|F}{M(Oxidation (M))|F}GYGG{I|L}P{I|L};[YN]G{[QV]|[N{I|L}]|[RA]|[KV]}YN{I|L}P{I|L};{[NV]|[RG]}{I|L}{M(Oxidation (M))|F}[HN]N{I|L}P{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WD]YN{I|L}P{I|L} 4.2822;3.3052;3.1709;3.1171;3.082;3.0732;2.8862;2.7798;2.7514;2.6455 -;-;-;-;-;-;-;-;-;- 2100 1 1.054 182369.3 1.0 10610 4922 15527 HBL1_DMSO_200M_050219_2,15534 HBL1_DMSO_200M_050219_2,15534,RSNFGYNIPL False True RSNFGYNIPL 81.671546 590.809252917767 10716434.0 15527.0 ENST00000553665.5_1_14:58711638-58724717:+|nuORF;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000556321.1_1_14:58714534-58724570:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3;;ENST00000555931.5_1_14:58714534-58727692:+|nuORF;;ENSG00000100567|ENST00000216455|PSMA3;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF 8.636981646219889 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15535 81.674 120.0 748880.0 25 0 92989.0 + 31536 RQLDSMIQL 9 86 552.2953611867066 1102.576169440213 2 552.2982055544853 MULTI CID FTMS 0 0 0 15527 518120.53125 0.5146181367025034 2 -0.2229995727539062 8 Unmodified _RQLDSMIQL_ ENSG00000138376|ENST00000260947|BARD1;nc|ENSG00000138376|Q99728-2|BARD1;nc|ENSG00000138376|Q99728-4|BARD1 24.99096001346401 0.2132109383330889 4 [Q{I|L}]DRSM{I|L}Q{I|L} 9 2 + 46.563 0.0 0.0 4.2231 4.2231 70.38 0.0 0.0 0.0 3.0102999566398125 16.478174818886377 3.0102999566398125 3.0102999566398125 0 0.218765315847925 0.0 0.3807196863200844 0.1694451763165201 [Q{I|L}]DRSM{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}NRSM{I|L}Q{I|L};[Q{I|L}]DRSM{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}NRSM{I|L}[AG]{I|L};[PA]E[KS]SM{I|L}Q{I|L};[PA]E[KS]SM{I|L}[AG]{I|L};[PA]E{I|L}[NG][YV]Q{I|L};[PA]N[W{I|L}][YV]Q{I|L} 4.2231;3.9501;3.388;3.115;3.0307;2.1995;1.0981;0.072891 -;-;-;-;-;-;-;- 110 1 1.054 75503.0 1.0 10611 4922 15527 HBL1_DMSO_200M_050219_2,15535 HBL1_DMSO_200M_050219_2,15535,RQLDSMIQL False True RQLDSMIQL 81.67405 552.298205554485 17436674.0 15527.0 nc|ENSG00000138376|Q99728-2|BARD1;;nc|ENSG00000138376|Q99728-4|BARD1;;ENSG00000138376|ENST00000260947|BARD1 4.403203805287679 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15536 81.677 176.0 608120.0 25 0 46878.0 + 29548 QLPELFHKI 9 109 375.5537274219199 1123.6393528659598 3 375.5534850955009 MULTI CID FTMS 0 0 0 15527 478010.5 1.0 0 0.0 9 Unmodified _QLPELFHKI_ ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-5|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2 32.78568957990786 0.1150597335874693 4 [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}H{I|L}K 9 2 + 55.167 0.0 0.0 4.9096 4.9096 68.281 0.0 0.0 0.0 18.69666231504993 0.5115252244738144 0.5115252244738144 0.5115252244738144 0 0.4876954943324545 1.154901959985743 0.3494850021680094 0.2215141619232908 [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}H{I|L}K;[Q{I|L}]PE{I|L}{M(Oxidation (M))|F}HK{I|L};[Q{I|L}]{I|L}[EP]{M(Oxidation (M))|F}H{I|L}K;[Q{I|L}]{I|L}[EP]{M(Oxidation (M))|F}HK{I|L} 4.9096;4.8641;4.0329;3.9874 -;+;-;- + 383 + 1 1.054 92531.1 1.0 10612 4922 15527 HBL1_DMSO_200M_050219_2,15536 HBL1_DMSO_200M_050219_2,15536,QLPELFHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15537 81.685 428.0 189500.0 25 0 13992.0 + 15295 IPIQINVGTTV 11 131 577.8424764256706 1153.6703999181411 2 577.8422729372978 MULTI CID FTMS 0 0 0 15527 422623.125 0.4225980596525868 4 -0.4200363159179687 10 Unmodified _IPIQINVGTTV_ ENSG00000204463|ENST00000676615|BAG6;ENST00000469182.1_1_6:31610750-31613330:-|nuORF;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 47.74868867922204 0.1300977870992118 4 [{I|L}P]Q{I|L}{I|L}NVGR 9 5 57.7 0.0 0.0 5.0014 0.0 0.0 0.0 160.05639108977087 160.05639108977087 33.882805414149786 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.3252574989159953 [{I|L}P]Q{I|L}{I|L}NVGR 5.0014 - 1457 1 1.054 68286.3 1.0 10613 4922 15527 HBL1_DMSO_200M_050219_2,15537 HBL1_DMSO_200M_050219_2,15537,IPIQINVGTTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15538 81.688 118.0 705680.0 25 0 58246.0 + -1 LAEMEMSL 8 110 478.2094409348333 954.4043289364666 2 478.2082702517509 MULTI CID FTMS 0 0 0 15527 405793.25 0.8886382085473997 -1 0.09912109375 11 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 15.768221252438446 0.6779680726941459 4 {[VA]|[{I|L}G]}D 3 -1 25.686 0.0 0.0 2.6914 0.0 0.0 0.0 666.2482980128916 666.2482980128916 2.0548534939126384 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}D 2.6914 - 150 1 1.054 65437.8 1.0 10614 4922 15527 HBL1_DMSO_200M_050219_2,15538 HBL1_DMSO_200M_050219_2,15538,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15539 81.696 448.0 418600.0 25 0 34025.0 + 33748 SLAGGIIGV 9 110 786.4718880202051 785.4646115536051 1 786.4727050662041 MULTI CID FTMS 0 0 0 15527 377910.9375 0.024777688314488 5 -0.57958984375 12 Unmodified _SLAGGIIGV_ ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF;nc|ENSG00000165119|P61978-3|HNRNPK;nc|ENSG00000165119|P61978|HNRNPK 109.62928328672726 0.0058899017516516 4 {[QV]|[N{I|L}]|[RA]|[KV]}AS{I|L}{I|L}GV 8 3 + 80.685 0.0 0.0 10.272 10.272 81.245 0.0 0.0 0.0 0.5115252244738144 14.904630595263413 0.5115252244738144 0.5115252244738144 0 0.8609243748081782 1.2218487496163564 1.774227503252014 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}AS{I|L}{I|L}GV;{[VA]|[{I|L}G]}GAS{I|L}{I|L}GV;{[TV]|[{I|L}S]}AN{I|L}{I|L}GV;{[VA]|[{I|L}G]}QS{I|L}{I|L}GV;{[TV]|[{I|L}S]}AGG{I|L}{I|L}GV;{[QV]|[N{I|L}]|[RA]|[KV]}TG{I|L}{I|L}GV;{[TV]|[{I|L}S]}QG{I|L}{I|L}GV;{[VA]|[{I|L}G]}TN{I|L}{I|L}GV;{[VA]|[{I|L}G]}GTG{I|L}{I|L}GV;{[VA]|[{I|L}G]}TGG{I|L}{I|L}GV 10.272;10.207;9.7753;9.7657;9.6783;9.3505;9.3119;9.3073;9.2854;9.2103 -;-;-;-;+;-;-;-;-;- + 1956 1 1.054 132900.8 1.0 10615 4922 15527 HBL1_DMSO_200M_050219_2,15539 HBL1_DMSO_200M_050219_2,15539,SLAGGIIGV True True SLAGGIIGV 81.695529 786.472705066204 129023760.0 15527.0 nc|ENSG00000165119|P61978-3|HNRNPK;;ENSG00000165119|ENST00000376263|HNRNPK;;nc|ENSG00000165119|P61978|HNRNPK;;ENST00000485383.1_1_3:96068520-96068997:+|nuORF 6.211996078491211 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15540 81.699 185.0 478370.0 25 0 90383.0 -1 GVLSLLCCT 9 99 483.24307045615234 964.4715879791048 2 483.2431518435478 MULTI CID FTMS 0 0 0 15527 341590.375 1.0 0 0.0 13 Carbamidomethyl (C) _GVLSLLC(Carbamidomethyl (C))CT_ ENST00000368655.4_1_1:153781276-153781465:-|nuORF 30.22481116460888 0.1466181017706357 4 [VG]S{I|L}{I|L}[TP]{I|L} 8 -1 39.135 0.0 0.0 4.0576 0.0 0.0 0.0 180.95807414537344 180.95807414537344 19.124628150806373 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.2302046884880935 0.0 [VG]S{I|L}{I|L}[TP]{I|L} 4.0576 - 333 1 1.054 72587.3 1.0 10616 4922 15527 HBL1_DMSO_200M_050219_2,15540 HBL1_DMSO_200M_050219_2,15540,GVLSLLCCT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15541 81.708 491.0 402640.0 25 0 58973.0 + 3203 AVYQDADIYL 10 162 585.787247105961 1169.559941278722 2 585.7872802615166 MULTI CID FTMS 0 0 0 15527 317631.03125 1.0 0 0.0 14 Unmodified _AVYQDADIYL_ ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4 27.628801355627647 0.3479284626772844 4 {I|L}AVWDC(Carbamidomethyl (C)){I|L} 7 7 27.678 0.0 0.0 2.3665 0.0 0.0 294.1698788781344 0.0 294.1698788781344 0.0 10.960200603165012 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AVWDC(Carbamidomethyl (C)){I|L} 2.3665 - 6208 + 1 1.054 151091.0 1.0 10617 4922 15527 HBL1_DMSO_200M_050219_2,15541 HBL1_DMSO_200M_050219_2,15541,AVYQDADIYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15542 81.712 204.0 341150.0 25 0 31666.0 + -1 KIFDNFSNL 9 113 549.2432030004906 1096.471853067781 2 549.2445556521416 MULTI CID FTMS 0 0 0 15527 276584.6875 1.0 0 0.0 15 Oxidation (M) _CM(Oxidation (M))MGVFPPIS_ nc|ENSG00000005801|O14628-6|ZNF195;nc|ENSG00000005801|O14628-7|ZNF195;nc|ENSG00000005801|O14628-5|ZNF195;nc|ENSG00000005801|O14628-4|ZNF195;ENSG00000005801|ENST00000399602|ZNF195 14.838274106304384 0.5985701837916485 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C))P{M(Oxidation (M))|F}[PA]{M(Oxidation (M))|F}D 9 -1 + 28.552 0.0 0.0 2.604 2.604 45.248 0.0 0.0 0.0 1.5204984964830075 0.8489371804636718 0.8489371804636718 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C))P{M(Oxidation (M))|F}[PA]{M(Oxidation (M))|F}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}P[PA]{M(Oxidation (M))|F}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}[HK]{M(Oxidation (M))|F}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){I|L}M[PA]{M(Oxidation (M))|F}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){I|L}[W{I|L}]{M(Oxidation (M))|F}D;{[{M(Oxidation (M))|F}C]|[YS]}[MD]{[MG]|[TS]}PPS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C))P{M(Oxidation (M))|F}[TP][MT];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}P[TP][MT];{[{M(Oxidation (M))|F}C]|[YS]}[MD]{[MG]|[TS]}PSP{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[CG]P{M(Oxidation (M))|F}[PA]{M(Oxidation (M))|F}D 2.604;2.604;2.4483;2.1688;2.0132;1.9795;1.9187;1.9187;1.8185;1.7642 -;-;-;-;-;-;-;-;-;- 478 1 1.054 58526.1 1.0 10618 4922 15527 HBL1_DMSO_200M_050219_2,15542 HBL1_DMSO_200M_050219_2,15542,CMMGVFPPIS False False KIFDNFSNL 81.711664 549.244555652142 2525146.75 15527.0 nc|ENSG00000005801|O14628-6|ZNF195;;nc|ENSG00000005801|O14628-7|ZNF195;;nc|ENSG00000005801|O14628-5|ZNF195;;nc|ENSG00000005801|O14628-4|ZNF195;;ENSG00000005801|ENST00000399602|ZNF195 0.8800702095031738 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15543 81.717 250.0 442070.0 25 0 72400.0 + 35738 SVIDHIHLI 9 107 349.53817951492715 1045.5927091449814 3 349.5377075076103 MULTI CID FTMS 0 0 0 15527 266870.15625 0.430815609287746 -2 0.1997909545898437 16 Unmodified _SVIDHIHLI_ ENSG00000123159|ENST00000393033|GIPC1;nc|ENSG00000123159|O14908-2|GIPC1 46.92087301778293 0.0471210510596396 4 [VS]{I|L}DH{I|L}H{I|L}{I|L} 9 0 + 62.105 0.0 0.0 5.9397 5.9397 74.453 0.0 0.0 0.0 4.349104129495416 12.252684618815088 4.349104129495416 1.478174818886373 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + + [VS]{I|L}DH{I|L}H{I|L}{I|L};[VS]{I|L}{I|L}DHH{I|L}{I|L};[VS]{I|L}D{I|L}HH{I|L}{I|L};[VS]{I|L}DH{I|L}{I|L}{I|L}H;[VS]{I|L}{I|L}DH{I|L}{I|L}H;[VS]{I|L}D{I|L}H{I|L}{I|L}H;[VS]{I|L}{I|L}{[QS]|[NT]}{[WT]|[RM]}{I|L};[VS]{I|L}{I|L}DRR{[MG]|[TS]};[VS]{I|L}D{I|L}RR{[MG]|[TS]};[H{I|L}][PA]{[QS]|[NT]}{I|L}{I|L}[PA] 5.9397;5.7984;5.5323;4.3537;4.2123;3.9463;3.3145;2.8027;2.5367;2.4978 +;-;-;-;-;-;-;-;-;- + 573 + 1 1.054 94098.9 1.0 10619 4922 15527 HBL1_DMSO_200M_050219_2,15543 HBL1_DMSO_200M_050219_2,15543,SVIDHIHLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15544 81.727 540.0 205830.0 25 0 27749.0 14455 IFTIPGRTYPV 11 103 632.3612475928292 1262.7079422524582 2 632.3624755740166 MULTI CID FTMS 0 0 0 15527 231629.84375 1.0 0 0.0 17 Unmodified _IFTIPGRTYPV_ ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF 6.2057823575117 0.8458686499021061 4 {I|L} 1 10 11.259 0.0 0.0 0.89166 0.0 0.0 1131.6128017268709 0.0 1131.6128017268709 0.0 8.160116073527028 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.89166 + + 116 + 1 1.054 89951.1 1.0 10620 4922 15527 HBL1_DMSO_200M_050219_2,15544 HBL1_DMSO_200M_050219_2,15544,IFTIPGRTYPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15545 81.737 586.0 250380.0 25 0 34290.0 7864 ELLLYFIFLIN 11 147 699.4083671219623 1396.8021813107246 2 699.4066650271416 MULTI CID FTMS 0 0 0 15527 192404.796875 0.3543293422016282 -6 0.6538772583007812 18 Unmodified _ELLLYFIFLIN_ ENSG00000078795|ENST00000508883|PKD2L2;nc|ENSG00000078795|Q9NZM6-3|PKD2L2;nc|ENSG00000078795|Q9NZM6-5|PKD2L2;nc|ENSG00000078795|Q9NZM6-6|PKD2L2;nc|ENSG00000078795|Q9NZM6-7|PKD2L2 5.731851221503515 0.8481046878870278 4 [{I|L}T]C{I|L}TAP 7 9 29.287 0.0 0.0 2.0967 0.0 0.0 0.0 694.4181840785558 694.4181840785558 8.731353458625001 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.7188739437914294 0.0 [{I|L}T]C{I|L}TAP 2.0967 - 1737 1 1.054 118503.0 1.0 10621 4922 15527 HBL1_DMSO_200M_050219_2,15545 HBL1_DMSO_200M_050219_2,15545,ELLLYFIFLIN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15546 81.748 601.0 290270.0 25 0 17114.0 + 29550 QLPELFHKI 9 184 562.8268237932507 1123.6390946533013 2 562.8265869021416 MULTI CID FTMS 0 0 0 15527 167262.15625 1.0 0 0.0 19 Unmodified _QLPELFHKI_ ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-5|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2 34.40172386719151 0.1061884637610825 4 [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}HK{I|L} 9 0 + 63.468 0.0 0.0 5.6484 5.6484 85.327 0.0 0.0 0.0 27.147642715192504 9.661417327390325 9.661417327390325 9.661417327390325 0 0.3054621874040891 2.0 0.3807196863200844 0.1022338482433752 + + [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}HK{I|L};[Q{I|L}]PE{I|L}{M(Oxidation (M))|F}H{I|L}K;[Q{I|L}]{I|L}[EP]{M(Oxidation (M))|F}HK{I|L};[Q{I|L}]{I|L}[EP]{M(Oxidation (M))|F}H{I|L}K;[VP]DRQR{I|L}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[HA]{M(Oxidation (M))|F}HK{I|L};{[QN]|[E{I|L}]|[KN]}PQ{I|L}{M(Oxidation (M))|F}HK{I|L};[VP]DR[AG]R{I|L}Q{I|L};[VP]DRQ[VG]{I|L}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HA]{I|L}{M(Oxidation (M))|F}HK{I|L} 5.6484;4.7886;4.6925;3.8327;3.2122;2.4601;2.4398;2.3927;2.3927;2.1922 +;-;-;-;-;-;-;-;-;- + 954 + 1 1.054 134872.6 1.0 10622 4922 15527 HBL1_DMSO_200M_050219_2,15546 HBL1_DMSO_200M_050219_2,15546,QLPELFHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15547 81.758 607.0 236020.0 25 0 99078.0 -1 0 105 643.9975390988312 1928.9707878966933 3 643.9969360232353 MULTI CID FTMS 0 0 0 15527 156559.65625 0.9849969073287852 -1 0.09912109375 20 4 {I|L}DK[R{I|L}] 5 -1 16.413 0.0 0.0 0.85088 0.0 0.0 1285.5657718828247 0.0 1285.5657718828247 0.0 0.2152998730866073 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3494850021680094 {I|L}DK[R{I|L}] 0.85088 - 564 + 1 1.054 111105.7 1.0 10623 4922 15527 HBL1_DMSO_200M_050219_2,15547 HBL1_DMSO_200M_050219_2,15547, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15549 81.763 13.0 3337400.0 25 0 345570.0 + 8689 EVITKFINV 9 85 531.8129399624711 1061.611326991742 2 531.8129150271416 MULTI CID FTMS 0 0 0 15548 3489276.25 0.6020428929796038 1 -0.1170501708984375 1 Unmodified _EVITKFINV_ ENSG00000152689|ENST00000403687|RASGRP3;nc|ENSG00000152689|Q8IV61-2|RASGRP3 49.93300154707207 0.0405168250806675 4 {NN|[MP]|[D{I|L}]|[EV]}[KC]{I|L}{I|L}{M(Oxidation (M))|F}T 8 5 43.575 0.0 0.0 4.1046 0.0 0.0 0.0 125.07239710025624 125.07239710025624 26.267959391884546 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.7059771852360797 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KC]{I|L}{I|L}{M(Oxidation (M))|F}T 4.1046 - 253 + 1 1.054 41882.4 1.0 10624 4923 15548 HBL1_DMSO_200M_050219_2,15549 HBL1_DMSO_200M_050219_2,15549,EVITKFINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15550 81.764 21.0 2086900.0 25 0 209660.0 + 40993 VMAPRTLLL 9 67 507.31240759346935 1012.6102622537388 2 507.3128845095634 MULTI CID FTMS 0 0 0 15548 1572631.0 0.0933121554635545 4 -0.4736404418945312 2 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 29.84058131909904 0.1515068451768857 4 VMAP 4 5 59.68 0.0 0.0 5.8937 0.0 0.0 0.0 611.3878267877561 611.3878267877561 37.91447825603967 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMAP 5.8937 + + 24 + 1 1.054 42937.9 1.0 10625 4923 15548 HBL1_DMSO_200M_050219_2,15550 HBL1_DMSO_200M_050219_2,15550,VMAPRTLLL False True VMAPRTLLL 81.763735 507.312884509563 303940608.0 15548.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 2.072951237360636 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15551 81.765 21.0 2384400.0 25 0 285240.0 + 13483 SVIDHIHLI 9 76 523.3030805482477 1044.5916081632954 2 523.8040038943291 MULTI CID FTMS 0 0 0 15548 1903398.75 0.8491699574589395 -1 0.1059494018554687 3 Unmodified _HLVEHRRV_ ENSG00000123159|ENST00000393033|GIPC1;nc|ENSG00000123159|O14908-2|GIPC1 9.347437153973935 0.7675937258251505 4 [KG]{I|L}DH{I|L}H{I|L}{I|L} 9 8 + 32.852 0.0 0.0 3.145 3.145 76.578 0.0 0.0 0.0 -4.103136006361112 8.595269404621504 -4.103136006361112 10.229846633000758 0 0.0 0.0 0.4247425010840047 0.0 [KG]{I|L}DH{I|L}H{I|L}{I|L};[VS][C(Carbamidomethyl (C))R]{I|L}[VS][KP];[KG]{I|L}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP]{I|L};[VG][KP][WP]H[KP] 3.145;2.1656;0.55935;0.4634 -;-;-;- 158 + 1 1.054 42256.0 1.0 10626 4923 15548 HBL1_DMSO_200M_050219_2,15551 HBL1_DMSO_200M_050219_2,15551,HLVEHRRV False False SVIDHIHLI 81.764914 523.804003894329 88916874.0 15548.0 ENSG00000123159|ENST00000393033|GIPC1;;nc|ENSG00000123159|O14908-2|GIPC1 3.801952600479126 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15552 81.766 31.0 1789500.0 25 0 210590.0 + 3353 AYPEIVAVY 9 75 512.7709309075278 1023.5273088818556 2 512.7718994021416 MULTI CID FTMS 0 0 0 15548 1505869.375 1.0 0 0.0 4 Unmodified _AYPEIVAVY_ ENSG00000178295|ENST00000381254|GEN1 18.13498045792455 0.3457906370836843 4 {NN|[MP]|[D{I|L}]|[EV]}AP{I|L}A 6 7 26.375 0.0 0.0 2.5769 0.0 0.0 0.0 440.182618290312 440.182618290312 6.911225100727592 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}AP{I|L}A 2.5769 - 177 1 1.054 50115.3 1.0 10627 4923 15548 HBL1_DMSO_200M_050219_2,15552 HBL1_DMSO_200M_050219_2,15552,AYPEIVAVY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15553 81.768 56.0 1621600.0 25 0 209350.0 + 17274 KLPPFLGLSL 10 84 542.8396147632048 1083.6646765932096 2 542.8397704958916 MULTI CID FTMS 0 0 0 15548 1303519.75 0.2875570003902421 2 -0.2222518920898437 5 Unmodified _KLPPFLGLSL_ ENST00000369781.8_3_1:110924330-110925491:-|nuORF 56.17704186161178 0.0466144807663799 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KP]{I|L}{I|L}EK{I|L} 9 6 + 60.112 0.0 0.0 5.5471 5.5471 79.757 0.0 0.0 0.0 4.509753191209626 20.724322010814888 4.509753191209626 5.860103319104354 0 1.445629013946523 1.154901959985743 0.0 0.6694451763165201 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KP]{I|L}{I|L}EK{I|L};{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}G{I|L}{I|L}EK{I|L};VVRD{I|L}{I|L}EK{I|L};{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}G{I|L}{I|L}TR{I|L};VVRD{I|L}{I|L}E{I|L}K;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KP]{I|L}{I|L}T[VG]{I|L};{[VA]|[{I|L}G]}[W{I|L}]{I|L}{I|L}EK{I|L};{[TV]|[{I|L}S]}G{I|L}[{I|L}A]{I|L}ER{I|L};{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}G{I|L}{I|L}T[VG]{I|L};{[VA]|[{I|L}G]}[W{I|L}]{I|L}{I|L}T[VG]{I|L} 5.5471;5.0064;4.3947;4.2672;4.041;3.9582;3.7858;3.7059;3.4215;2.1969 -;-;-;-;-;-;-;-;-;- 517 1 1.054 72929.6 1.0 10628 4923 15548 HBL1_DMSO_200M_050219_2,15553 HBL1_DMSO_200M_050219_2,15553,KLPPFLGLSL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15554 81.769 32.0 1466100.0 25 0 234460.0 + 1706 ALPLSEGTH 9 61 462.7437540417929 923.4729551503858 2 462.7437927126884 MULTI CID FTMS 0 0 0 15548 1008583.4375 0.3823540436329007 9 -1.030517578125 6 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 15.847184025352805 0.4077185912009129 4 [{I|L}A]P{I|L} 4 -1 38.94 0.0 0.0 4.2167 0.0 0.0 0.0 526.1923922174436 526.1923922174436 27.68110275043508 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.2167 + + 19 + 1 1.054 39685.6 1.0 10629 4923 15548 HBL1_DMSO_200M_050219_2,15554 HBL1_DMSO_200M_050219_2,15554,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15555 81.775 338.0 897200.0 25 0 155900.0 + 14004 IADFGMASL 9 134 470.7263908802107 939.4382288272216 2 470.7259704470634 MULTI CID FTMS 0 0 0 15548 655224.125 0.2059635036490614 -18 1.8995437622070312 7 Oxidation (M) _IADFGM(Oxidation (M))ASL_ ENSG00000160469|ENST00000309383|BRSK1;ENSG00000174672|ENST00000528841|BRSK2;ENST00000531078.1_1_11:1463684-1466535:+|nuORF;nc|ENSG00000160469|Q8TDC3-2|BRSK1;nc|ENSG00000160469|Q8TDC3-3|BRSK1;nc|ENSG00000174672|Q8IWQ3-2|BRSK2;nc|ENSG00000174672|Q8IWQ3-3|BRSK2;nc|ENSG00000174672|Q8IWQ3-4|BRSK2;nc|ENSG00000174672|Q8IWQ3-5|BRSK2;nc|ENSG00000174672|Q8IWQ3-6|BRSK2 48.345845343767074 0.0439967357579942 4 {I|L}A{I|L} 3 6 47.435 0.0 0.0 5.0493 0.0 0.0 0.0 639.2107631684474 639.2107631684474 25.43604829328153 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}A{I|L} 5.0493 - 439 + 1 1.054 232504.3 1.0 10630 4923 15548 HBL1_DMSO_200M_050219_2,15555 HBL1_DMSO_200M_050219_2,15555,IADFGMASL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15556 81.777 108.0 476260.0 25 0 54427.0 + 22605 LPYHRIFIM 9 77 397.2231112871707 1188.647504461712 3 397.2230407595634 MULTI CID FTMS 0 0 0 15548 527417.0 1.0 0 0.0 8 Unmodified _LPYHRIFIM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 32.78568957990786 0.1150597335874693 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}M 9 2 + 39.529 0.0 0.0 3.3256 3.3256 64.728 0.0 0.0 0.0 1.4928876664371415 4.672940310928489 1.4928876664371415 1.4928876664371415 0 0.718765315847925 1.6989700043360187 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}M;[{I|L}P]W[RN]{M(Oxidation (M))|F}{I|L}{I|L}M 3.3256;3.2 -;- 73 1 1.054 45652.5 1.0 10631 4923 15548 HBL1_DMSO_200M_050219_2,15556 HBL1_DMSO_200M_050219_2,15556,LPYHRIFIM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15557 81.78 135.0 1082400.0 25 0 201390.0 -1 ALLETYCA 8 96 314.15345579277783 939.4385379785336 3 314.1530029177666 MULTI CID FTMS 0 0 0 15548 516749.65625 0.2620067659141012 15 -1.6361846923828125 9 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 30.63653989081413 0.3996269429323407 4 A{I|L}{I|L}E 4 -1 63.404 0.0 0.0 6.7491 0.0 0.0 0.0 510.171213018225 510.171213018225 52.11758134947864 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.1549471895720984 0.0 A{I|L}{I|L}E 6.7491 + + 67 + 1 1.054 120143.8 1.0 10632 4923 15548 HBL1_DMSO_200M_050219_2,15557 HBL1_DMSO_200M_050219_2,15557,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15558 81.782 75.0 725030.0 25 0 89003.0 + 17851 KQLDFSVSI 9 77 518.7877552448651 1035.5609575565302 2 518.7879516482353 MULTI CID FTMS 0 0 0 15548 532693.0625 1.0 0 0.0 10 Unmodified _KQLDFSVSI_ ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1 38.17557092003332 0.0854718145212029 4 {NN|[MP]|[D{I|L}]|[EV]}[KQ]{M(Oxidation (M))|F}SVS{I|L} 9 4 + 44.899 0.0 0.0 4.3357 4.3357 67.881 0.0 0.0 0.0 1.465460211140055 1.465460211140055 1.465460211140055 1.465460211140055 0 0.8182503180159344 1.3979400086720375 0.805462187404089 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KQ]{M(Oxidation (M))|F}SVS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}VS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RS{I|L};[KQ]{I|L}D{M(Oxidation (M))|F}SVS{I|L};[Q{I|L}]KD{M(Oxidation (M))|F}SVS{I|L};{[VA]|[{I|L}G]}AKD{M(Oxidation (M))|F}SVS{I|L};[HV]VYYRS{I|L};[HV][PA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ][YG]{I|L}S{I|L};[KQ]{[YC]|[HE]}[VP]VS{I|L};[KQ]{I|L}D[YG]{I|L}S{I|L} 4.3357;4.1942;4.1097;3.9396;3.2936;2.5222;1.9185;1.8242;1.8212;1.5982 -;-;+;-;-;-;-;-;-;- + 192 1 1.054 46617.1 1.0 10633 4923 15548 HBL1_DMSO_200M_050219_2,15558 HBL1_DMSO_200M_050219_2,15558,KQLDFSVSI True True KQLDFSVSI 81.781582 518.787951648235 6413087.0 15548.0 ENSG00000078674|ENST00000325083|PCM1;;nc|ENSG00000078674|Q15154-4|PCM1;;nc|ENSG00000078674|Q15154-2|PCM1;;nc|ENSG00000078674|Q15154-5|PCM1 3.0708204905192056 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15559 81.784 139.0 468210.0 25 0 33048.0 + + 35455 STTVTLFKV 9 104 498.29291355180845 994.5712741704168 2 498.2932006716728 MULTI CID FTMS 0 0 0 15548 409236.875 0.0730400456120042 4 -0.4736404418945312 11 Unmodified _STLILPTGPP_ nc|ENSG00000211899|P01871|IGHM 46.020951573049366 0.1035046897853725 4 {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV 9 -1 + 47.177 0.0 0.0 4.7434 4.7434 83.179 0.0 0.0 0.0 18.86190924028451 11.9812969097282 11.9812969097282 14.490925311194182 0 0.5994850021680094 0.0 0.5 0.2059771852360797 {[MG]|[TS]}TVT{I|L}{M(Oxidation (M))|F}KV;{[MG]|[TS]}T{I|L}{I|L}S{M(Oxidation (M))|F}KV;{[TV]|[{I|L}S]}{I|L}[RH]V[RD];{[MG]|[TS]}TV[{I|L}P]{I|L}[PA]P;[{I|L}T]V[RH]V[RD];{[MG]|[TS]}TV[{I|L}P][PA]{I|L}P;{[MG]|[TS]}TV[{I|L}P][PA]P{I|L};{[MG]|[TS]}T{I|L}{I|L}[YK]G{I|L};{[MG]|[TS]}T{I|L}{I|L}[YK]AV;[VP]VPS{[NV]|[RG]}{[{M(Oxidation (M))|F}H]|[RQ]} 4.7434;3.2864;2.6536;2.0952;1.9745;1.6951;1.6436;0.66286;0.46993;0.15585 -;-;-;-;-;-;-;-;-;- 400 + 1 1.054 54795.0 1.0 10634 4923 15548 HBL1_DMSO_200M_050219_2,15559 HBL1_DMSO_200M_050219_2,15559,STLILPTGPP False False STTVTLFKV 81.784378 498.293200671673 142365768.0 15548.0 nc|ENSG00000211899|P01871|IGHM 6.532020886739095 2.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 15560 81.793 473.0 460930.0 25 0 54951.0 + 16942 KILPEEITNL 10 185 585.3418710450403 1168.6691891568803 2 585.3420898318291 MULTI CID FTMS 0 0 0 15548 298480.5 1.0 0 0.0 12 Unmodified _KILPEEITNL_ ENSG00000066557|ENST00000370952|LRRC40 61.08992128646608 0.0337271188422265 4 [EP]E{I|L}{I|L}K{I|L}TN{I|L} 10 6 + 58.804 0.0 0.0 5.0317 5.0317 69.874 0.0 0.0 0.0 1.0882241283440592 7.295617653774826 1.0882241283440592 1.0882241283440592 0 0.9916440611282626 0.585026652029182 0.8778623208748889 0.3494850021680094 [EP]E{I|L}{I|L}K{I|L}TN{I|L};[VS]P{[QG]|[NA]}{I|L}K{I|L}TN{I|L};[VS]G[QP]{I|L}K{I|L}TN{I|L};{I|L}{I|L}K[EP]E{I|L}TN{I|L};{[QN]|[E{I|L}]|[KN]}[EP]{I|L}K{I|L}TN{I|L};[EP]E{I|L}{I|L}K{I|L}TGG{I|L};{[MS]|[{M(Oxidation (M))|F}A]}H{I|L}{I|L}K{I|L}TN{I|L};[VS]P{[QG]|[NA]}{I|L}K{I|L}TGG{I|L};{[TV]|[{I|L}S]}[HM]{I|L}K{I|L}TN{I|L};[VS]G[QP]{I|L}K{I|L}TGG{I|L} 5.0317;4.9386;4.6749;4.335;4.3092;4.2475;4.2204;4.1575;4.059;3.8938 -;-;-;-;-;-;-;-;-;- 5062 1 1.054 163723.0 1.0 10635 4923 15548 HBL1_DMSO_200M_050219_2,15560 HBL1_DMSO_200M_050219_2,15560,KILPEEITNL True True KILPEEITNL 81.792758 585.342089831829 4556672.5 15548.0 ENSG00000066557|ENST00000370952|LRRC40 4.983744621276856 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15561 81.802 499.0 241100.0 25 0 14400.0 + 30669 RFPEELTQTF 10 137 634.3192248256998 1266.6238967181996 2 634.3192016482353 MULTI CID FTMS 0 0 0 15548 270901.59375 0.6021966627908867 -12 1.2656097412109375 13 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 43.9818466556824 0.1155196613165264 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SAVE{I|L}EQT{M(Oxidation (M))|F} 11 5 + 78.925 0.0 0.0 6.2311 6.2311 74.265 0.0 0.0 0.0 2.1479633912993847 16.575773191777927 2.1479633912993847 0.7841822988146987 0 1.274227503252014 1.3979400086720375 1.1505149978319906 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SAVE{I|L}EQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DG{I|L}E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[TP]E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SAQQ{I|L}TQT{M(Oxidation (M))|F};[QT]{M(Oxidation (M))|F}GQP{I|L}TQT{M(Oxidation (M))|F};[QT]{M(Oxidation (M))|F}NAP{I|L}TQT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}MAVE{I|L}EQT{M(Oxidation (M))|F};[QT]{M(Oxidation (M))|F}GGAP{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{[ET]|[MV]}P{I|L}TQT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}MAQQ{I|L}TQT{M(Oxidation (M))|F} 6.2311;6.1692;6.0927;6.0927;6.0615;6.049;5.9385;5.9163;5.855;5.8 -;-;-;-;-;-;-;-;-;- 12887 1 1.054 92061.2 1.0 10636 4923 15548 HBL1_DMSO_200M_050219_2,15561 HBL1_DMSO_200M_050219_2,15561,RFPEELTQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15562 81.81 492.0 392470.0 25 0 18316.0 -1 0 132 915.9336501051862 1829.8527472771725 2 915.938525378704 MULTI CID FTMS 0 0 0 15548 239592.5625 0.699329827636736 -1 0.1059494018554687 14 4 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQDA{M(Oxidation (M))|F}YQ 13 -1 96.963 0.0 0.0 5.2989 0.0 0.0 0.0 227.130641975533 227.130641975533 64.86957794170507 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.4247425010840047 1.079689690656103 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQDA{M(Oxidation (M))|F}YQ 5.2989 - 17853 1 1.054 127190.4 1.0 10637 4923 15548 HBL1_DMSO_200M_050219_2,15562 HBL1_DMSO_200M_050219_2,15562, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15563 81.82 556.0 351690.0 25 0 30159.0 + -1 ITYGCRQPLL 10 145 610.8252736847714 1219.6359944363428 2 610.8248779177666 MULTI CID FTMS 0 0 0 15548 190636.5 0.5284696269576019 -3 0.3057403564453125 15 Carbamidomethyl (C) _ITYGC(Carbamidomethyl (C))RQPLL_ REV__ENSG00000139266|ENST00000266643|MARCHF9;REV__nc|ENSG00000139266|Q86YJ5-2|MARCHF9 15.847184025352805 0.5816416552707754 4 [VP]SGM{I|L}TV 8 -1 38.323 0.0 0.0 3.1422 0.0 0.0 0.0 432.1890699580803 432.1890699580803 20.23300802509004 0.0 0.0 0.0 0 0.0 0.7695510786217261 1.1549471895720984 0.0 [VP]SGM{I|L}TV 3.1422 - 2964 1 1.054 144123.9 1.0 10638 4923 15548 HBL1_DMSO_200M_050219_2,15563 HBL1_DMSO_200M_050219_2,15563,ITYGCRQPLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15564 81.83 548.0 272490.0 25 0 32542.0 + 36370 SYQDYEIEI 9 184 580.2609584513252 1158.5073639694504 2 580.2615234255791 MULTI CID FTMS 0 0 0 15548 161756.1875 1.0 0 0.0 16 Unmodified _SYQDYEIEI_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 34.40172386719151 0.1061884637610825 4 {[QN]|[E{I|L}]|[KN]}HPCYTA[EP] 10 8 + 47.903 0.0 0.0 4.1349 4.1349 70.924 0.0 0.0 0.0 3.4205363464022227 3.4205363464022227 3.4205363464022227 3.4205363464022227 0 0.0 1.0969100130080565 0.1923877696554315 0.2614393726401688 {[QN]|[E{I|L}]|[KN]}HPCYTA[EP];{[YD]|[{M(Oxidation (M))|F}M]}QSYEK{I|L}N;{[QN]|[E{I|L}]|[KN]}HPCCCK{I|L}N;{[QN]|[E{I|L}]|[KN]}HPCY[NG]{I|L}N;[YE]NSYEK{I|L}N;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ATYCCKN{I|L};{[QN]|[E{I|L}]|[KN]}HPCY{[{M(Oxidation (M))|F}H]|[RQ]}N;[AG]DYSYEK{I|L}N;{[QD]|[EN]|[WG]|[KD]|[RS]}YSYEK{I|L}N;{[YD]|[{M(Oxidation (M))|F}M]}[AG]SYEK{I|L}N 4.1349;3.8396;3.7649;3.6912;3.1863;3.1287;3.0856;3.0541;2.8428;2.829 -;-;-;-;-;-;-;-;-;- 3961 1 1.054 117246.7 1.0 10639 4923 15548 HBL1_DMSO_200M_050219_2,15564 HBL1_DMSO_200M_050219_2,15564,SYQDYEIEI True True SYQDYEIEI 81.829701 580.261523425579 840065.3125 15548.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1 0.9313495016346376 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15565 81.841 549.0 299260.0 25 0 19337.0 + 8347 ERSIYGNGDL 10 171 562.2744609590368 1122.5343689848737 2 562.7750121951103 MULTI CID FTMS 0 0 0 15548 169197.84375 1.0 0 0.0 17 Unmodified _ERSIYGNGDL_ REV__ENSG00000121905|ENST00000373467|HPCA 13.042465956692816 0.6287021003332052 4 PE{I|L}{M(Oxidation (M))|F}HK{I|L} 7 -1 27.644 0.0 0.0 2.4626 0.0 0.0 240.03652948950224 0.0 240.03652948950224 0.0 8.431087926598266 0.0 0.0 0 0.0 0.0 0.0 0.0 PE{I|L}{M(Oxidation (M))|F}HK{I|L} 2.4626 - 1282 + 1 1.054 128746.0 1.0 10640 4923 15548 HBL1_DMSO_200M_050219_2,15565 HBL1_DMSO_200M_050219_2,15565,ERSIYGNGDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15566 81.851 619.0 298500.0 25 0 24682.0 8601 EVALRVPCL 9 195 500.28850314067 998.56245334814 2 500.2887451052666 MULTI CID FTMS 0 0 0 15548 172396.984375 0.6997592886400271 1 -0.1170501708984375 18 Unmodified _EVALRVPCL_ ENSG00000170881|ENST00000303545|RNF139 21.74664581756881 0.2544899275067181 4 [PS]P{M(Oxidation (M))|F}A 5 8 41.808 0.0 0.0 4.1868 0.0 0.0 0.0 496.2955992504204 496.2955992504204 21.94549451227133 0.0 0.0 0.0 0 0.2742275032520141 1.0969100130080565 1.0393476900973595 0.0 [PS]P{M(Oxidation (M))|F}A 4.1868 - 1651 1 1.054 140401.4 1.0 10641 4923 15548 HBL1_DMSO_200M_050219_2,15566 HBL1_DMSO_200M_050219_2,15566,EVALRVPCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15567 81.863 687.0 313760.0 25 0 59333.0 + 7418 EGLKLMNL 8 164 459.2601791781378 916.5058054230756 2 459.2599670290947 MULTI CID FTMS 0 0 0 15548 157298.203125 0.4727513974154095 -1 0.1059494018554687 19 Unmodified _EGLKLMNL_ ENSG00000177200|ENST00000447540|CHD9;ENST00000569225.5_1_16:53269177-53281416:+|nuORF;nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9 71.92227651296345 0.1092646934517833 4 {[DA]|[EG]}{I|L}K{I|L}MN{I|L} 8 0 + 77.384 0.0 0.0 8.4433 8.4433 93.42 0.0 0.0 0.0 20.06621263074983 13.399480616943508 13.399480616943508 9.262137858390815 0 1.5 2.0 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}K{I|L}MN{I|L};{[DA]|[EG]}{I|L}K{I|L}MGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}MN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}MGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}MK{I|L}AN{I|L};[KP]{M(Oxidation (M))|F}D{I|L}AN{I|L};[K{I|L}]MD{I|L}AN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KD{I|L}AN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RS{I|L}AN{I|L};{[SA]|[TG]}[NS]K{I|L}AN{I|L} 8.4433;7.4327;6.2539;5.2433;5.2099;5;5;4.6351;4.443;4.2509 +;-;-;-;-;-;-;-;-;- + 1822 1 1.054 166135.9 1.0 10642 4923 15548 HBL1_DMSO_200M_050219_2,15567 HBL1_DMSO_200M_050219_2,15567,EGLKLMNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15568 81.875 626.0 205670.0 25 0 16847.0 + 2462 AQWEMGIVQA 10 161 566.7756928219517 1131.5368327107033 2 566.7763549685478 MULTI CID FTMS 0 0 0 15548 165091.1875 0.6844603643295387 -1 0.1059494018554687 20 Unmodified _AQWEMGIVQA_ ENSG00000109685|ENST00000508803|NSD2;ENST00000508355.5_1_4:1902372-1920392:+|nuORF;nc|ENSG00000109685|O96028-3|NSD2;nc|ENSG00000109685|O96028-5|NSD2;nc|ENSG00000109685|O96028-6|NSD2 78.7280429016045 0.0181102348768482 4 [QA]WEGM{I|L} 7 5 52.95 0.0 0.0 4.6795 0.0 0.0 0.0 313.1486908174588 313.1486908174588 32.8742370844024 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9916440611282626 1.4049471895720984 [QA]WEGM{I|L} 4.6795 - 1003 1 1.054 102709.1 1.0 10643 4923 15548 HBL1_DMSO_200M_050219_2,15568 HBL1_DMSO_200M_050219_2,15568,AQWEMGIVQA True True AQWEMGIVQA 81.875361 566.776354968548 2707067.25 15548.0 ENST00000508355.5_1_4:1902372-1920392:+|nuORF;;nc|ENSG00000109685|O96028-3|NSD2;;nc|ENSG00000109685|O96028-6|NSD2;;nc|ENSG00000109685|O96028-5|NSD2;;ENSG00000109685|ENST00000508803|NSD2 6.656877517700195 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15570 81.88 0.77 82108000.0 25 0 7488200.0 + 3896 DALDKIRLI 9 77 528.8237779724682 1055.6330030117365 2 528.8245727419853 MULTI CID FTMS 0 0 0 15569 60526396.0 0.6792606600333301 1 -0.1052017211914062 1 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 43.77239144664712 0.0547478964384323 4 DA{I|L}DK{I|L}R{I|L}{I|L} 9 0 + 85.679 0.0 0.0 8.1164 8.1164 96.361 0.0 0.0 0.0 77.936909460092 3.65279269351241 3.65279269351241 26.334172022634377 0 1.3807196863200843 1.6989700043360187 0.0 0.4247425010840047 + + DA{I|L}DK{I|L}R{I|L}{I|L};{I|L}DADK{I|L}R{I|L}{I|L} 8.1164;5.6217 +;- + 81 + 1 1.05 53640.6 1.0 10644 4924 15569 HBL1_DMSO_200M_050219_2,15570 HBL1_DMSO_200M_050219_2,15570,DALDKIRLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15571 81.881 10.0 4567400.0 25 0 415170.0 + 3899 DALDKIRLI 9 65 352.88544868345866 1055.634516650576 3 352.8852111697197 MULTI CID FTMS 0 0 0 15569 4486799.0 0.6104231393249495 2 -0.1970367431640625 2 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 22.736283301280096 0.2418982879461534 4 {[DA]|[EG]}{I|L}DK{I|L}[R{I|L}]{I|L} 9 0 + 57.623 0.0 0.0 5.4586 5.4586 88.791 0.0 0.0 0.0 46.51409360265546 1.706962271689747 1.706962271689747 57.623337350737245 0 0.3252574989159953 2.0 0.0 0.4247425010840047 + + {[DA]|[EG]}{I|L}DK{I|L}[R{I|L}]{I|L} 5.4586 + + 40 + 1 1.05 43414.0 1.0 10645 4924 15569 HBL1_DMSO_200M_050219_2,15571 HBL1_DMSO_200M_050219_2,15571,DALDKIRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15572 81.882 13.0 4227600.0 25 0 902540.0 + 11398 GGLVIWPNLV 10 77 534.315955407261 1066.6173578813218 2 534.3154174685478 MULTI CID FTMS 0 0 0 15569 3810517.75 0.0965922854188483 -3 0.3221206665039062 3 Unmodified _GGLVIWPNLV_ REV__ENSG00000086475|ENST00000327347|SEPHS1;REV__nc|ENSG00000086475|P49903-2|SEPHS1;REV__nc|ENSG00000086475|P49903-3|SEPHS1;REV__nc|ENSG00000086475|P49903-4|SEPHS1 36.04419817259434 0.1993394420055842 4 [H{I|L}]{M(Oxidation (M))|F}{I|L}VN{I|L}{I|L}V 9 -1 + 62.444 0.0 0.0 5.8544 5.8544 56.142 0.0 0.0 0.0 3.609564424188676 16.478174818886373 3.609564424188676 0.0 0 0.4247425010840047 0.8538719643217619 0.0 0.3494850021680094 [H{I|L}]{M(Oxidation (M))|F}{I|L}VN{I|L}{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}VN{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}V{I|L}N{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}VN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]VN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}V[WP]N{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]V{I|L}N{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}VH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}V;[{I|L}P]WN{I|L}VN{I|L}V;[{I|L}P]WNVN{I|L}{I|L}V 5.8544;5.8544;5.5722;5.516;5.516;5.2338;5.2338;5.0687;5.0633;5.0633 -;-;-;-;-;-;-;-;-;- 652 1 1.05 48203.6 1.0 10646 4924 15569 HBL1_DMSO_200M_050219_2,15572 HBL1_DMSO_200M_050219_2,15572,GGLVIWPNLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15573 81.883 14.0 3198000.0 25 0 511040.0 + 2242 AQFEHTILL 9 69 536.2955518215266 1070.576550709853 2 536.2955810427666 MULTI CID FTMS 0 0 0 15569 3114304.75 0.2889002160788129 -2 0.2229995727539062 4 Unmodified _AQFEHTILL_ ENSG00000111142|ENST00000323666|METAP2;nc|ENSG00000111142|P50579-2|METAP2;nc|ENSG00000111142|P50579-3|METAP2 34.40172386719151 0.1061884637610825 4 [QA][WE][QA]{I|L}{I|L}{I|L} 9 3 + 43.605 0.0 0.0 4.073 4.073 68.748 0.0 0.0 0.0 2.357405846330778 13.46787486224656 2.357405846330778 2.442864366258739 0 0.8494850021680094 0.0 1.25 0.4247425010840047 [QA][WE][QA]{I|L}{I|L}{I|L};[EP][C(Carbamidomethyl (C))K][QA]{I|L}{I|L}{I|L};[QA][WE]{I|L}[QA]{I|L}{I|L};[EP][C(Carbamidomethyl (C))K]{I|L}[QA]{I|L}{I|L};[QA][WE]{I|L}{I|L}[QA]{I|L};[EP][C(Carbamidomethyl (C))K]{I|L}{I|L}[QA]{I|L} 4.073;3.8448;3.7918;3.5636;3.2134;2.9852 -;-;-;-;-;- 78 1 1.05 42082.1 1.0 10647 4924 15569 HBL1_DMSO_200M_050219_2,15573 HBL1_DMSO_200M_050219_2,15573,AQFEHTILL True True AQFEHTILL 81.883144 536.295581042767 98696520.0 15569.0 ENSG00000111142|ENST00000323666|METAP2;;nc|ENSG00000111142|P50579-2|METAP2;;nc|ENSG00000111142|P50579-3|METAP2 4.8684563636779785 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15574 81.884 24.0 2730500.0 25 0 143420.0 + 9912 FPFYGKPMRI 10 73 628.3361852914626 1254.657817649725 2 628.3369628787041 MULTI CID FTMS 0 0 0 15569 1834286.875 0.6714237475343724 -3 0.3221206665039062 5 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 41.8396318013385 0.1381409678234242 4 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 7 5 76.503 0.0 0.0 6.0975 0.0 0.0 0.0 399.1829622858032 399.1829622858032 43.05925402426212 0.0 0.0 0.0 0 1.305462187404089 2.0 0.0 0.4247425010840047 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 6.0975 - 387 + 1 1.05 54110.2 1.0 10648 4924 15569 HBL1_DMSO_200M_050219_2,15574 HBL1_DMSO_200M_050219_2,15574,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15575 81.886 41.0 1304500.0 25 0 140510.0 + 3074 AVMEQIPEI 9 76 515.2675953142445 1028.520637695289 2 515.2681762576103 MULTI CID FTMS 0 0 0 15569 1447101.375 1.0 0 0.0 6 Unmodified _AVMEQIPEI_ ENSG00000124571|ENST00000265351|XPO5;ENST00000455854.2_1_6:43491608-43492751:-|nuORF 46.020951573049366 0.0490941689151868 4 {[VA]|[{I|L}G]}MEAG{I|L} 7 4 41.675 0.0 0.0 4.0519 0.0 0.0 0.0 354.1649607756203 354.1649607756203 17.422298029337853 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}MEAG{I|L} 4.0519 - 309 1 1.05 47834.3 1.0 10649 4924 15569 HBL1_DMSO_200M_050219_2,15575 HBL1_DMSO_200M_050219_2,15575,AVMEQIPEI True True AVMEQIPEI 81.885502 515.26817625761 19115218.0 15569.0 ENST00000455854.2_1_6:43491608-43492751:-|nuORF;;ENSG00000124571|ENST00000265351|XPO5 3.460849205652873 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15576 81.887 50.0 812070.0 25 0 123580.0 + 44091 YIYDKDMEII 10 59 651.8178817326284 1301.6212105320567 2 651.8181030154228 MULTI CID FTMS 0 0 0 15569 1208565.75 0.4224578578829109 2 -0.1970367431640625 7 Unmodified _YIYDKDMEII_ ENSG00000124422|ENST00000261497|USP22;nc|ENSG00000124422|Q9UPT9-2|USP22 20.41453444215458 0.5050059513928961 4 {[QD]|[EN]|[WG]|[KD]|[RS]}YDME{I|L}Y{I|L}{I|L} 10 6 + 55.996 0.0 0.0 4.302 4.302 82.719 0.0 0.0 0.0 6.266485927408766 15.551054989851906 6.266485927408766 22.998037644757048 0 0.6989700043360187 0.0 1.1382104921644451 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}YDME{I|L}Y{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}YDM[Y{I|L}]E{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}YD[Y{I|L}]ME{I|L}{I|L};[QP]{[YD]|[{M(Oxidation (M))|F}M]}DY{I|L}Y{I|L}{I|L};[Y{I|L}]P[Y{I|L}]M[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][VP];[{I|L}T]{[C(Carbamidomethyl (C))E]|[WC]}DY{I|L}Y{I|L}{I|L};[Y{I|L}]PM[Y{I|L}][C(Carbamidomethyl (C)){M(Oxidation (M))|F}][VP];[QP]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}Y{I|L}{I|L};[{I|L}T]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}Y{I|L}{I|L} 4.302;2.5352;2.3039;2.0306;2.0076;1.9861;1.7764;0.91735;0.87279 -;-;-;-;-;-;-;-;- 170 1 1.05 43804.6 1.0 10650 4924 15569 HBL1_DMSO_200M_050219_2,15576 HBL1_DMSO_200M_050219_2,15576,YIYDKDMEII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15577 81.888 39.0 1387000.0 25 0 149150.0 + 22531 LPWGDPSQI 9 84 506.7587970229282 1011.5030411126564 2 506.7587768435478 MULTI CID FTMS 0 0 0 15569 1115389.375 0.4167869025878382 -2 0.2229995727539062 8 Unmodified _LPWGDPSQI_ ENSG00000134758|ENST00000261593|RNF138;ENST00000502765.1_1_5:54825986-54826487:-|nuORF;nc|ENSG00000134758|Q8WVD3-2|RNF138 60.38955033654506 0.025866396858536 4 [{I|L}P]WGD[PS]Q{I|L} 9 0 + 37.167 0.0 0.0 3.6745 3.6745 73.31 0.0 0.0 0.0 6.478174818886373 9.872863283806891 6.478174818886373 6.478174818886373 0 0.2887254899964357 1.2218487496163564 0.5 0.5 + + [{I|L}P]WGD[PS]Q{I|L};[WP]GD{I|L}[PS]Q{I|L};[WP]{I|L}GD[PS]Q{I|L};[WP]G{I|L}D[PS]Q{I|L};[{I|L}P]WGD[PS][AG]{I|L};[WP]GD{I|L}[PS][AG]{I|L};{[QN]|[E{I|L}]|[KN]}YY[PS]Q{I|L};[WP]{I|L}GD[PS][AG]{I|L};[VP]YY{[ET]|[MV]}Q{I|L};[WP]G{I|L}D[PS][AG]{I|L} 3.6745;3.034;2.6406;2.343;2.2698;1.6293;1.5562;1.2359;1.0392;0.93833 +;-;-;-;-;-;-;-;-;- + 276 1 1.05 48469.4 1.0 10651 4924 15569 HBL1_DMSO_200M_050219_2,15577 HBL1_DMSO_200M_050219_2,15577,LPWGDPSQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15578 81.891 154.0 993120.0 25 0 71581.0 -1 0 119 887.4152002696463 1772.8158476060926 2 887.9167358279228 MULTI CID FTMS 0 0 0 15569 469118.0 0.4176588298545161 -2 0.2229995727539062 9 4 VSV{I|L}VE[QP] 8 -1 48.964 0.0 0.0 2.7619 0.0 0.0 903.3364907719114 0.0 903.3364907719114 0.0 -5.4022852021169 -5.4022852021169 0.0 0 0.0 0.0 1.860924374808178 0.0 VSV{I|L}VE[QP] 2.7619 - 5443 + 1 1.05 104129.5 1.0 10652 4924 15569 HBL1_DMSO_200M_050219_2,15578 HBL1_DMSO_200M_050219_2,15578, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15579 81.894 171.0 426820.0 25 0 34567.0 + -1 FFFYCLFCFVI 11 72 781.8658135636273 0 781.8657714724541 PEAK CID FTMS 0 0 0 15569 466361.03125 0.3577868537251416 1 -0.1052017211914062 10 2 Carbamidomethyl (C) _FFFYC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))FVI_ REV__ENSG00000164197|ENST00000389100|RNF180 6.723162845929126 0.47618401536486 4 VQY{M(Oxidation (M))|F}ANQQAE 10 -1 70.628 0.0 0.0 4.5224 0.0 0.0 131.08942783697995 249.0635164850219 380.1529443220019 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 1.610924374808178 VQY{M(Oxidation (M))|F}ANQQAE 4.5224 - 580 + 1 1.05 59179.8 1.0 10653 4924 15569 HBL1_DMSO_200M_050219_2,15579 HBL1_DMSO_200M_050219_2,15579,FFFYCLFCFVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15580 81.897 119.0 431530.0 25 0 36717.0 33927 SLGMVVIADL 10 73 509.28511317023833 0 509.2845336794853 PEAK CID FTMS 0 0 0 15569 412208.5 1.0 0 0.0 11 Unmodified _SLGMVVIADL_ ENSG00000132016|ENST00000586783|BRME1;nc|ENSG00000132016|Q0VDD7-2|BRME1 24.020572477871973 0.2658879206942018 4 {I|L}AVQ 4 8 18.034 0.0 0.0 1.774 0.0 0.0 345.1931378621579 257.0931795709594 602.2863174331173 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 {I|L}AVQ 1.774 - 122 + 1 1.05 48096.4 1.0 10654 4924 15569 HBL1_DMSO_200M_050219_2,15580 HBL1_DMSO_200M_050219_2,15580,SLGMVVIADL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15581 81.906 508.0 394530.0 25 0 46205.0 + + 12991 LPILVQHI 8 139 467.813618904195 933.61268487519 2 467.8137084841728 MULTI CID FTMS 0 0 0 15569 332249.53125 0.2045723170318162 2 -0.1970367431640625 12 Unmodified _HALIVRLL_ ENST00000574547.5_1_17:4442712-4447986:-|nuORF;ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 63.562846038646086 0.116059504757595 4 HA{I|L}V{I|L}{I|L}R{I|L} 8 -1 + 93.67 0.0 0.0 10.033 10.033 92.725 0.0 0.0 0.0 24.604093769761874 11.588709367037282 11.588709367037282 9.018637558036673 0 2.3283409326844264 1.6989700043360187 0.0 0.7302046884880937 HA{I|L}V{I|L}{I|L}R{I|L};HA{I|L}{I|L}V{I|L}R{I|L};HA{I|L}V{I|L}{I|L}{I|L}R;HA{I|L}{I|L}V{I|L}{I|L}R;{I|L}HAV{I|L}{I|L}R{I|L};H{I|L}AV{I|L}{I|L}R{I|L};{I|L}HA{I|L}V{I|L}R{I|L};H{I|L}A{I|L}V{I|L}R{I|L};[HA]{I|L}V{I|L}{I|L}R{I|L};{I|L}HAV{I|L}{I|L}{I|L}R 10.033;9.0671;8.7918;7.8258;7.3977;7.3553;6.4317;6.3893;6.3797;6.1564 -;-;-;-;-;-;-;-;-;- 416 + 1 1.05 155605.4 1.0 10655 4924 15569 HBL1_DMSO_200M_050219_2,15581 HBL1_DMSO_200M_050219_2,15581,HALIVRLL False False LPILVQHI 81.905899 467.813708484173 3742679.0 15569.0 ENST00000574547.5_1_17:4442712-4447986:-|nuORF;;ENSG00000132382|ENST00000254718|MYBBP1A;;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 0.0341368913650512 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15582 81.914 460.0 330250.0 25 0 20373.0 + 41894 VQDEFLEKL 9 183 560.8014672469185 1119.588381560637 2 560.8007079958916 MULTI CID FTMS 0 0 0 15569 340678.21875 0.6109291374624646 -5 0.5129776000976562 13 Unmodified _VQDENKLFK_ ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B 32.78568957990786 0.1150597335874693 4 VQDE{M(Oxidation (M))|F}{I|L}EK{I|L} 9 4 + 78.085 0.0 0.0 6.9744 6.9744 92.409 0.0 0.0 0.0 55.55704844060413 12.587418566968168 12.587418566968168 16.420651529995475 0 0.7302046884880937 0.721246399047171 0.805462187404089 0.850576203518622 VQDE{M(Oxidation (M))|F}{I|L}EK{I|L};V[AG]DE{M(Oxidation (M))|F}{I|L}EK{I|L};VQDE{M(Oxidation (M))|F}{I|L}[VG]T{I|L};VQDE{M(Oxidation (M))|F}[R{I|L}]T{I|L};VQDE{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}S{I|L};VQDE{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}TV;VQ[QP]PVPC(Carbamidomethyl (C))PV;V[AG]DE{M(Oxidation (M))|F}{I|L}[VG]T{I|L};V[AG]DE{M(Oxidation (M))|F}[R{I|L}]T{I|L};V[AG]DE{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}S{I|L} 6.9744;5.5078;5.2798;4.9374;4.7232;4.505;3.7141;3.477;3.4707;2.9203 -;-;-;-;-;-;-;-;-;- 1559 + 1 1.05 123133.4 1.0 10656 4924 15569 HBL1_DMSO_200M_050219_2,15582 HBL1_DMSO_200M_050219_2,15582,VQDENKLFK True False VQDEFLEKL 81.914063 560.800707995892 5400857.5 15569.0 ENSG00000009954|ENST00000339594|BAZ1B;;nc|ENSG00000009954|Q9UIG0-2|BAZ1B 6.209036191304524 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15583 81.922 462.0 315010.0 25 0 36595.0 + 34887 SQIDDLYSTI 10 163 577.7823792428418 1153.5502055524837 2 577.7835571169853 MULTI CID FTMS 0 0 0 15569 325358.71875 0.706180644649305 -1 0.1170501708984375 14 Unmodified _SQIDDLYSTI_ ENSG00000151726|ENST00000281455|ACSL1;ENST00000513001.5_1_4:185678281-185679089:-|nuORF;nc|ENSG00000151726|P33121-2|ACSL1;nc|ENSG00000151726|P33121-3|ACSL1 55.50274090549119 0.048383292844968 4 {[QS]|[NT]}{I|L}DD{I|L} 6 4 38.256 0.0 0.0 3.3163 0.0 0.0 0.0 479.2138365197919 479.2138365197919 13.439974919137192 0.0 0.0 0.0 0 0.0 0.4814860601221125 0.9650302283996908 0.4916440611282626 + {[QS]|[NT]}{I|L}DD{I|L} 3.3163 + + 2189 1 1.05 111612.3 1.0 10657 4924 15569 HBL1_DMSO_200M_050219_2,15583 HBL1_DMSO_200M_050219_2,15583,SQIDDLYSTI True True SQIDDLYSTI 81.922267 577.783557116985 3734487.75 15569.0 ENST00000513001.5_1_4:185678281-185679089:-|nuORF;;ENSG00000151726|ENST00000281455|ACSL1;;nc|ENSG00000151726|P33121-2|ACSL1;;nc|ENSG00000151726|P33121-3|ACSL1 6.242024898529053 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15584 81.932 555.0 321360.0 25 0 44515.0 + 25286 NAAENMLEI 9 196 502.7400113493447 1003.4654697654894 2 502.7401611208916 MULTI CID FTMS 0 0 0 15569 238077.359375 1.0 0 0.0 15 Unmodified _NAAENMLEI_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 22.736283301280096 0.2418982879461534 4 {[QG]|[NA]}EANM 6 5 22.28 0.0 0.0 2.2203 0.0 0.0 0.0 370.19807673181134 370.19807673181134 2.85257666393688 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.75 {[QG]|[NA]}EANM 2.2203 - 1093 1 1.05 134742.4 1.0 10658 4924 15569 HBL1_DMSO_200M_050219_2,15584 HBL1_DMSO_200M_050219_2,15584,NAAENMLEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15585 81.935 148.0 519040.0 25 0 79645.0 + 1234 AIIPRVPSL 9 103 483.3108875303943 0 483.3107787966728 PEAK CID FTMS 0 0 0 15569 235396.90625 0.237291515866275 -5 0.5129776000976562 16 Unmodified _AIIPRVPSL_ ENSG00000152464|ENST00000378197|RPP38 25.399314129420983 0.152124705672316 4 {I|L}{I|L} 2 7 13.711 0.0 0.0 1.4214 0.0 0.0 184.1231200415884 551.2960909479124 735.4192109895007 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}{I|L} 1.4214 + + 93 + 1 1.05 61178.1 1.0 10659 4924 15569 HBL1_DMSO_200M_050219_2,15585 HBL1_DMSO_200M_050219_2,15585,AIIPRVPSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15586 81.941 256.0 330320.0 25 0 35422.0 + 12690 GVLPNIQAV 9 103 455.771210605697 909.527868278194 2 455.7698547244072 MULTI CID FTMS 0 0 0 15569 241529.125 0.0076401406084513 11 -1.307769775390625 17 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 24.67388899826682 0.2172451872415813 4 [TP]A{I|L}PE 6 7 34.479 0.0 0.0 3.7909 0.0 0.0 0.0 298.18652181128897 298.18652181128897 9.834628044222796 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.4258337024346173 0.0 [TP]A{I|L}PE 3.7909 - 719 1 1.05 68321.0 1.0 10660 4924 15569 HBL1_DMSO_200M_050219_2,15586 HBL1_DMSO_200M_050219_2,15586,GVLPNIQAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15587 81.955 796.0 382780.0 25 0 90825.0 -1 DALLPILL 8 148 303.8607017615893 908.560275884968 3 303.8604919314384 MULTI CID FTMS 0 0 0 15569 192142.703125 0.5078269840573703 -2 0.2229995727539062 18 Acetyl (Protein N-term) _(Acetyl (Protein N-term))DALLPILL_ ENST00000356731.9_1_5:179051529-179051574:-|nuORF 0.7936320650641473 0.8195151834710337 4 {I|L} 1 -1 13.979 0.0 0.0 1.5386 0.0 0.0 777.4651963945369 0.0 777.4651963945369 0.0 3.829087576549593 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5386 + + 35 + 1 1.05 243246.6 1.0 10661 4924 15569 HBL1_DMSO_200M_050219_2,15587 HBL1_DMSO_200M_050219_2,15587,DALLPILL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15588 81.967 741.0 329820.0 25 0 17564.0 -1 0 146 951.461356267182 1900.908159601164 2 951.4611694216728 MULTI CID FTMS 0 0 0 15569 196168.859375 0.9674852902215364 -1 0.1170501708984375 19 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TC(Carbamidomethyl (C))MSMPNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 121.44 0.0 0.0 6.3883 6.3883 58.198 0.0 0.0 0.0 3.7138174915025104 12.870608634502148 3.7138174915025104 0.0 0 2.0158715643802765 1.3979400086720375 1.5 1.6237125054200234 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TC(Carbamidomethyl (C))MSMPNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TC(Carbamidomethyl (C))MSMPNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[DN]{I|L}SMPNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[DN]{I|L}SMPNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YSVDQMPNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YSVDQMPNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YSVQDMPNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YSVQDMPNA{M(Oxidation (M))|F}YQV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}GAT{I|L}SMPNA{M(Oxidation (M))|F}YQV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}GAT{I|L}SMPNA{M(Oxidation (M))|F}YKV{I|L} 6.3883;6.3883;6.3651;6.3651;6.3369;6.3369;6.3161;6.3161;6.1929;6.1929 -;-;-;-;-;-;-;-;-;- 126376 1 1.05 153918.5 1.0 10662 4924 15569 HBL1_DMSO_200M_050219_2,15588 HBL1_DMSO_200M_050219_2,15588, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15589 81.981 758.0 191240.0 25 0 19336.0 -1 FPFYGKPMRI 10 111 424.5583924761551 1270.6533480286653 3 424.5583679080009 MULTI CID FTMS 0 0 0 15569 187721.34375 0.7547830747982582 -4 0.42279052734375 20 Oxidation (M) _FPFYGKPM(Oxidation (M))RI_ ENSG00000125870|ENST00000246071|SNRPB2 15.738622578938676 0.5834632108994704 4 {I|L}Y{M(Oxidation (M))|F}PE 5 -1 40.261 0.0 0.0 3.1685 0.0 0.0 603.3187733380875 0.0 603.3187733380875 0.0 24.062959475437747 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}Y{M(Oxidation (M))|F}PE 3.1685 - 312 1 1.05 119810.0 1.0 10663 4924 15569 HBL1_DMSO_200M_050219_2,15589 HBL1_DMSO_200M_050219_2,15589,FPFYGKPMRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15591 81.985 6.2 8034900.0 25 0 1163600.0 + 1627 ALMAAPLSL 9 71 451.75274496202985 901.4909369908596 2 451.7528869509697 MULTI CID FTMS 0 0 0 15590 10656478.0 0.820522901271484 10 -1.2025680541992188 1 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 49.66892048692302 0.0410958345688192 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 3 + 66.092 0.0 0.0 7.3315 7.3315 82.305 0.0 0.0 0.0 11.505149978319906 8.384767769392738 8.384767769392738 3.0102999566398125 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}ASP{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};{[TV]|[{I|L}S]}MASP{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[PS]{M(Oxidation (M))|F}APS{I|L}A{I|L} 7.3315;6.9975;6.4683;6.0552;5.7213;5.192;4.8668;4.6999;4.5269;4.3659 -;-;-;-;-;-;-;-;-;- 265 1 1.046 46067.4 1.0 10664 4925 15590 HBL1_DMSO_200M_050219_2,15591 HBL1_DMSO_200M_050219_2,15591,ALMAAPLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15592 81.986 11.0 6433200.0 25 0 1118000.0 + 9917 FPFYGKPMRI 10 66 419.2266078236951 1254.6579940712852 3 419.2267639040947 MULTI CID FTMS 0 0 0 15590 3984197.5 0.8106338123953886 -3 0.3282012939453125 2 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 27.628801355627647 0.3479284626772844 4 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 67.612 0.0 0.0 5.3889 0.0 0.0 119.07407576728671 0.0 119.07407576728671 0.0 40.70107520596089 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.3889 - 220 1 1.046 62017.7 1.0 10665 4925 15590 HBL1_DMSO_200M_050219_2,15592 HBL1_DMSO_200M_050219_2,15592,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15593 81.987 24.0 2515700.0 25 0 389570.0 -1 DILVQMCE 8 87 512.2277682275403 1022.4409835218806 2 512.2286254763603 MULTI CID FTMS 0 0 0 15590 1788103.0 1.0 0 0.0 3 Carbamidomethyl (C),Oxidation (M) _DILVQM(Oxidation (M))C(Carbamidomethyl (C))E_ ENSG00000069248|ENST00000261396|NUP133 13.50788311687929 0.7113601687236069 4 {NN|[MP]|[D{I|L}]|[EV]}A{I|L}PA 6 -1 30.099 0.0 0.0 2.9438 0.0 0.0 0.0 439.0980629498681 439.0980629498681 4.151851506881688 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}A{I|L}PA 2.9438 - 251 1 1.046 53435.8 1.0 10666 4925 15590 HBL1_DMSO_200M_050219_2,15593 HBL1_DMSO_200M_050219_2,15593,DILVQMCE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15594 81.988 32.0 2038700.0 25 0 227090.0 + 34963 SQLDVPFKV 9 85 516.7891099093613 1031.5636668855225 2 516.7902709841728 MULTI CID FTMS 0 0 0 15590 1769692.375 1.0 0 0.0 4 Unmodified _SQLDVPFKV_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 47.594388314883695 0.0456443387682827 4 {[QS]|[NT]}{I|L}DVP{M(Oxidation (M))|F}KV 9 0 + 55.767 0.0 0.0 5.4061 5.4061 86.102 0.0 0.0 0.0 31.074151663243192 8.595269404621497 8.595269404621497 15.198239323345994 0 0.7742275032520141 0.9208187539523752 0.0 0.0 + + {[QS]|[NT]}{I|L}DVP{M(Oxidation (M))|F}KV;{[QS]|[NT]}{I|L}DV[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QS]|[NT]}{I|L}[{I|L}T][DV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QS]|[NT]}{I|L}[{I|L}T][R{M(Oxidation (M))|F}][PA] 5.4061;3.9327;0.56319;0.1373 +;-;-;- + 183 + 1 1.046 54345.7 1.0 10667 4925 15590 HBL1_DMSO_200M_050219_2,15594 HBL1_DMSO_200M_050219_2,15594,SQLDVPFKV True True SQLDVPFKV 81.988348 516.790270984173 15798984.0 15590.0 ENSG00000197969|ENST00000360280|VPS13A;;nc|ENSG00000197969|Q96RL7-2|VPS13A;;nc|ENSG00000197969|Q96RL7-4|VPS13A;;nc|ENSG00000197969|Q96RL7-3|VPS13A 7.850808302561442 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15595 81.99 81.0 700740.0 25 0 38681.0 -1 0 87 881.413916772189 1760.813280611178 2 881.9152099490166 MULTI CID FTMS 0 0 0 15590 793522.5 0.0283203681950333 6 -0.6736907958984375 5 4 EY{M(Oxidation (M))|F}AQNQA[CS]C(Carbamidomethyl (C))V{I|L} 13 -1 65.954 0.0 0.0 3.7457 0.0 0.0 229.185791452778 0.0 229.185791452778 0.0 48.95429475781856 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.8494850021680094 EY{M(Oxidation (M))|F}AQNQA[CS]C(Carbamidomethyl (C))V{I|L} 3.7457 - 6046 + 1 1.046 44282.2 1.0 10668 4925 15590 HBL1_DMSO_200M_050219_2,15595 HBL1_DMSO_200M_050219_2,15595, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15596 81.992 96.0 1071800.0 25 0 106520.0 9983 FPHKPIILI 9 113 539.3442961586686 1076.6740393841371 2 539.3446533083916 MULTI CID FTMS 0 0 0 15590 744783.6875 0.6980666256765363 -1 0.1052017211914062 6 Unmodified _FPHKPIILI_ ENSG00000114982|ENST00000431828|KANSL3;ENST00000447759.5_3_2:97261350-97293793:-|nuORF;ENST00000487070.5_1_2:97267510-97285240:-|nuORF;ENST00000488907.5_1_2:97276365-97278231:-|nuORF;ENST00000597150.5_1_2:97261350-97297069:-|nuORF;nc|ENSG00000114982|Q9P2N6-2|KANSL3;nc|ENSG00000114982|Q9P2N6-4|KANSL3;nc|ENSG00000114982|Q9P2N6-5|KANSL3;nc|ENSG00000114982|Q9P2N6-6|KANSL3;nc|ENSG00000114982|Q9P2N6-8|KANSL3;nc|ENSG00000114982|Q9P2N6|KANSL3 64.23631603340823 0.0237365939569086 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HK{I|L}P{I|L}{I|L}{I|L} 9 2 + 62.143 0.0 0.0 5.7718 5.7718 73.966 0.0 0.0 0.0 1.586615947324077 14.09256854528806 1.586615947324077 1.586615947324077 0 1.841129063296272 1.2218487496163564 0.2742275032520141 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HK{I|L}P{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}K{M(Oxidation (M))|F}{I|L}M{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}K{M(Oxidation (M))|F}{I|L}{I|L}M{I|L}{I|L};{I|L}{I|L}PKHM{I|L}{I|L}{I|L};[HK]P{I|L}{I|L}M{I|L}{I|L}{I|L};{I|L}{I|L}PKH{I|L}M{I|L}{I|L};[HK]P{I|L}{I|L}{I|L}M{I|L}{I|L};{I|L}{I|L}PKHP{M(Oxidation (M))|F}{I|L}{I|L};[HK]P{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}{I|L};[HK]P{M(Oxidation (M))|F}{I|L}P{I|L}{I|L}{I|L} 5.7718;5.6244;5.4608;4.9917;4.8592;4.8281;4.6956;4.5485;4.416;4.374 -;-;-;-;-;-;-;-;-;- 1207 1 1.046 86101.4 1.0 10669 4925 15590 HBL1_DMSO_200M_050219_2,15596 HBL1_DMSO_200M_050219_2,15596,FPHKPIILI True True KPHIIPFIL 81.992314 539.344653308392 12764867.0 15590.0 nc|ENSG00000183010|P32322-2|PYCR1;;ENSG00000183010|ENST00000329875|PYCR1;;ENST00000478402.5_1_1:226109873-226110089:-|nuORF;;ENSG00000143811|ENST00000343818|PYCR2;;nc|ENSG00000183010|P32322-3|PYCR1 3.4648377497990928 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15597 81.994 53.0 797060.0 25 0 213200.0 11706 GLGPDFESIR 10 71 545.7822210911718 0 545.7822753787041 PEAK CID FTMS 0 0 0 15590 738657.75 0.6267792252423107 1 -0.0918350219726562 7 Unmodified _GLGPDFESIR_ ENSG00000109944|ENST00000227349|JHY 20.453626601364224 0.2946171403104198 4 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 2 9 9.464 0.0 0.0 0.86861 0.0 0.0 356.2061004348324 436.1847933404906 792.3908937753231 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 0.86861 - 110 + 1 1.046 38937.6 1.0 10670 4925 15590 HBL1_DMSO_200M_050219_2,15597 HBL1_DMSO_200M_050219_2,15597,GLGPDFESIR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15598 81.995 58.0 1045100.0 25 0 197300.0 + + 16571 RTFEDFVRI 9 68 590.8107086193163 1179.6068643054325 2 591.8166381716728 MULTI CID FTMS 0 0 0 15590 680364.125 0.9356840586404618 1 -0.0918350219726562 8 Unmodified _KDGYNAFRPL_ nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;ENSG00000278540|ENST00000616317|ACACA 5.731851221503515 0.7001233259664787 4 R 1 -1 11.99 0.0 0.0 1.0164 0.0 0.0 1005.4950154058216 0.0 1005.4950154058216 0.0 0.5630250076728771 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.0164 + + 73 + 1 1.046 52179.7 1.0 10671 4925 15590 HBL1_DMSO_200M_050219_2,15598 HBL1_DMSO_200M_050219_2,15598,KDGYNAFRPL False False RTFEDFVRI 81.99516 591.816638171673 6183763.0 15590.0 nc|ENSG00000278540|Q13085-2|ACACA;;nc|ENSG00000278540|Q13085|ACACA;;nc|ENSG00000278540|Q13085-3|ACACA;;ENSG00000278540|ENST00000616317|ACACA 2.8918122251828517 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15599 81.999 176.0 711590.0 25 0 57472.0 + 41233 VPFSVPKI 8 99 443.772467802316 885.5303826714321 2 443.7732421755791 MULTI CID FTMS 0 0 0 15590 582714.1875 0.305922925522155 -4 0.4273223876953125 9 Unmodified _VPFSVPKI_ ENSG00000068079|ENST00000415816|IFI35;ENST00000246911.6_1_17:41158964-41165399:+|nuORF;nc|ENSG00000068079|P80217-2|IFI35 68.08070601005525 0.1147890174299629 4 VP{M(Oxidation (M))|F}SVPK{I|L} 8 0 + 71.699 0.0 0.0 8.0967 8.0967 94.015 0.0 0.0 0.0 30.07772706128891 12.150093250860508 12.150093250860508 12.150093250860508 0 1.0387254899964358 1.5228787452803376 0.4247425010840047 0.0 + + VP{M(Oxidation (M))|F}SVPK{I|L};VP{M(Oxidation (M))|F}SV{I|L}[KP];V{I|L}MSVPK{I|L};V{I|L}MSV{I|L}[KP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SVP[K{I|L}]V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SPV[K{I|L}]V;V{I|L}[TA]V[RD]{I|L};V{I|L}[TA]V{[RE]|[WV]}V;[VP][MT]V[K{I|L}]V;[TA]QQV[K{I|L}]V 8.0967;6.7246;6.5532;5.1811;4.7514;3.0818;2.1686;1.835;1.8187;0.20002 +;-;-;-;-;-;-;-;-;- + 369 + 1 1.046 103156.5 1.0 10672 4925 15590 HBL1_DMSO_200M_050219_2,15599 HBL1_DMSO_200M_050219_2,15599,VPFSVPKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15600 82.003 206.0 416220.0 25 0 33970.0 -1 0 118 690.9722976929846 2069.8950636791537 3 691.3080322146416 MULTI CID FTMS 0 0 0 15590 492740.5625 0.6765121202162065 -1 0.1052017211914062 10 4 [YQ]{I|L}V{I|L}ENY 8 -1 43.875 0.0 0.0 2.1197 0.0 0.0 0.0 1044.3663093574917 1044.3663093574917 24.661903266879715 0.0 0.0 0.0 0 0.8182503180159344 1.0 0.0 0.6307196863200843 [YQ]{I|L}V{I|L}ENY 2.1197 - 476 + 1 1.046 84145.8 1.0 10673 4925 15590 HBL1_DMSO_200M_050219_2,15600 HBL1_DMSO_200M_050219_2,15600, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15601 82.006 156.0 485300.0 25 0 79295.0 + 35739 SVIDHIHLI 9 92 349.53817951492715 1045.5927091449814 3 349.5379211306572 MULTI CID FTMS 0 0 0 15590 486700.9375 0.7856943012149927 1 -0.0918350219726562 11 Unmodified _SVIDHIHLI_ ENSG00000123159|ENST00000393033|GIPC1;nc|ENSG00000123159|O14908-2|GIPC1 53.57557251787612 0.0325303259649373 4 [VS]{I|L}DH{I|L}H{I|L}{I|L} 9 0 + 70.455 0.0 0.0 6.7383 6.7383 90.605 0.0 0.0 0.0 12.54554718523508 12.98332479720628 12.54554718523508 12.501225267834002 0 0.7614393726401688 2.0 0.4247425010840047 0.0 + + [VS]{I|L}DH{I|L}H{I|L}{I|L};[VS]{I|L}{I|L}[HD]H{I|L}{I|L};[VS]{I|L}DH{I|L}{I|L}{I|L}H;[VS]{I|L}{I|L}[HD]{I|L}{I|L}H;W{I|L}[{M(Oxidation (M))|F}V]QQ{I|L}{I|L};W{I|L}[{M(Oxidation (M))|F}V]{I|L}QQ{I|L};W{I|L}{I|L}[{M(Oxidation (M))|F}V]QQ{I|L} 6.7383;5.5427;4.8523;3.6567;2.2181;1.7618;1.5934 +;-;-;-;-;-;- + 403 + 1 1.046 69004.3 1.0 10674 4925 15590 HBL1_DMSO_200M_050219_2,15601 HBL1_DMSO_200M_050219_2,15601,SVIDHIHLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15602 82.01 213.0 660520.0 25 0 35478.0 23673 LTSDKMCSMV 10 152 557.7491304312346 1113.483707929269 2 557.7492553591728 MULTI CID FTMS 0 0 0 15590 397571.21875 0.6070252977326513 -1 0.1052017211914062 12 Unmodified _LTSDKMCSMV_ ENST00000389400.4_1_10:86320393-86320726:+|nuORF 25.399314129420983 0.3980215340001851 4 [TA][PS]{M(Oxidation (M))|F}TA 7 7 32.734 0.0 0.0 2.9398 0.0 0.0 0.0 435.1354793650673 435.1354793650673 8.841667574414924 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 1.151387079793446 0.0 [TA][PS]{M(Oxidation (M))|F}TA 2.9398 - 2536 1 1.046 111986.7 1.0 10675 4925 15590 HBL1_DMSO_200M_050219_2,15602 HBL1_DMSO_200M_050219_2,15602,LTSDKMCSMV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15603 82.015 311.0 567290.0 25 0 73818.0 18585 LADHGDDVN 9 176 478.2094409348333 954.4043289364666 2 478.2089416384697 MULTI CID FTMS 0 0 0 15590 387204.40625 0.8479308857691931 2 -0.2513885498046875 13 Unmodified _LADHGDDVN_ ENSG00000196151|ENST00000359774|WDSUB1;nc|ENSG00000196151|Q8N9V3-2|WDSUB1 15.847184025352805 0.4077185912009129 4 [{I|L}A]P 3 7 25.062 0.0 0.0 2.6259 0.0 0.0 0.0 670.2066720363291 670.2066720363291 2.203686453772772 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]P 2.6259 - 805 1 1.046 136876.6 1.0 10676 4925 15590 HBL1_DMSO_200M_050219_2,15603 HBL1_DMSO_200M_050219_2,15603,LADHGDDVN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15604 82.025 570.0 499520.0 25 0 38845.0 + 1733 ALPYQVVEV 9 109 1017.5609481374252 1016.5536716708252 1 1017.56016844511 MULTI CID FTMS 0 0 0 15590 349396.78125 0.7780624155049404 1 -0.0918350219726562 14 Unmodified _ALPYQVVEV_ ENSG00000148334|ENST00000338961|PTGES2;ENST00000277462.9_1_9:130887138-130890631:-|nuORF;ENST00000474124.5_1_9:130886092-130889945:-|nuORF 103.74828524460852 0.0090107942103208 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVVA{I|L}EV 9 4 + 88.468 0.0 0.0 8.7027 8.7027 84.263 0.0 0.0 0.0 15.932408374341025 5.0 5.0 2.768024924119672 0 0.25 1.6989700043360187 0.5138793319624578 1.3996498648046138 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVVA{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVA{I|L}VEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVVA{I|L}D{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QA{I|L}VVEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QV{I|L}AVEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVA{I|L}VD{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVAV{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QVV{I|L}AEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}AVVEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAV{I|L}VEV 8.7027;8.4304;8.2109;7.9849;7.9611;7.9386;7.7905;7.758;7.5935;7.5923 -;-;-;-;-;-;-;-;-;- 13510 1 1.046 179860.2 1.0 10677 4925 15590 HBL1_DMSO_200M_050219_2,15604 HBL1_DMSO_200M_050219_2,15604,ALPYQVVEV True True ALPYQVVEV 82.025344 1017.56016844511 4579495.5 15590.0 ENST00000474124.5_1_9:130886092-130889945:-|nuORF;;ENSG00000148334|ENST00000338961|PTGES2;;ENST00000277462.9_1_9:130887138-130890631:-|nuORF 1.8373628457387288 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15605 82.027 90.0 789420.0 25 0 69045.0 + -1 NNYMAVLCYI 10 103 610.2796357993667 1218.5447186655333 2 610.2799560427666 MULTI CID FTMS 0 0 0 15590 360548.125 0.4809424881066409 -2 0.2222518920898437 15 Oxidation (M) _NNYM(Oxidation (M))AVLCYI_ REV__ENSG00000110042|ENST00000227451|DTX4;REV__nc|ENSG00000110042|Q9Y2E6-2|DTX4 15.847184025352805 0.5816416552707754 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TT{[DA]|[EG]}EY{I|L} 10 -1 + 65.143 0.0 0.0 5.346 5.346 70.074 0.0 0.0 0.0 8.65279269351241 33.67352904675503 8.65279269351241 0.4980376447570478 0 1.25 1.2218487496163564 0.7059771852360797 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TT{[DA]|[EG]}EY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TT[YG]EE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TT{[DA]|[EG]}YE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TYGTEE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}YTGTEE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TT{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}TY{[WT]|[RM]}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EE{I|L};{[DA]|[EG]}ERAEGTEE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YVS{[DA]|[EG]}EY{I|L} 5.346;5.3051;5.1827;5.0162;4.7038;4.5892;4.3797;4.1897;4.1406;4.128 -;-;-;-;-;-;-;-;-;- 2029 1 1.046 57628.0 1.0 10678 4925 15590 HBL1_DMSO_200M_050219_2,15605 HBL1_DMSO_200M_050219_2,15605,NNYMAVLCYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15606 82.038 592.0 523230.0 25 0 25761.0 + -1 SPLGSMPEI 9 127 930.952790013958 0 930.9505493044852 PEAK CID FTMS 0 0 0 15590 294986.09375 1.0 0 0.0 16 nc|ENSG00000135899|Q9HB58|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;ENSG00000135899|ENST00000258381|SP110;nc|ENSG00000135899|Q9HB58-2|SP110;chr2:230221784-230225535|39|15.72|0.43|5.19|-|ENST00000540870|SP110,SP110;ENST00000490880.5_1_2:231065532-231076254:-|nuORF;nc|ENSG00000135899|Q9HB58-3|SP110;ENST00000486146.2_1_2:231068050-231077551:-|nuORF 4 VQY{M(Oxidation (M))|F}ANQC(Carbamidomethyl (C))[Y{I|L}]SGD 13 -1 76.611 0.0 0.0 4.1191 0.0 0.0 132.09969904764858 179.11939417056877 311.2190932182174 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0189301784845295 1.6237125054200234 VQY{M(Oxidation (M))|F}ANQC(Carbamidomethyl (C))[Y{I|L}]SGD 4.1191 - 8855 + 1 1.046 200366.4 1.0 10679 4925 15590 HBL1_DMSO_200M_050219_2,15606 HBL1_DMSO_200M_050219_2,15606, False False SPLGSMPEI 82.037727 930.950549304485 7918316.75 15590.0 nc|ENSG00000135899|Q9HB58|SP110;;nc|ENSG00000135899|Q9HB58-5|SP110;;nc|ENSG00000135899|Q9HB58-7|SP110;;ENSG00000135899|ENST00000258381|SP110;;nc|ENSG00000135899|Q9HB58-2|SP110;;chr2:230221784-230225535|39|15.72|0.43|5.19|-|ENST00000540870|SP110,SP110;;ENST00000490880.5_1_2:231065532-231076254:-|nuORF;;nc|ENSG00000135899|Q9HB58-3|SP110;;ENST00000486146.2_1_2:231068050-231077551:-|nuORF 6.137055238087972 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15607 82.051 747.0 371480.0 25 0 23937.0 + 29549 QLPELFHKI 9 184 375.5537274219199 1123.6393528659598 3 375.5535156130791 MULTI CID FTMS 0 0 0 15590 292034.53125 0.6109374820218384 3 -0.3584442138671875 17 Unmodified _QLPELFHKI_ ENSG00000069424|ENST00000378083|KCNAB2;nc|ENSG00000069424|Q13303-2|KCNAB2;nc|ENSG00000069424|Q13303-4|KCNAB2;nc|ENSG00000069424|Q13303-5|KCNAB2;nc|ENSG00000069424|Q13303|KCNAB2 45.69961567697781 0.0497987121815769 4 [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}HK{I|L} 9 0 + 58.536 0.0 0.0 5.2095 5.2095 68.993 0.0 0.0 0.0 18.69666231504993 0.2482358372503199 0.2482358372503199 0.2482358372503199 0 0.4417509724019616 1.154901959985743 0.7742275032520141 0.2059771852360797 + + [Q{I|L}]PE{I|L}{M(Oxidation (M))|F}HK{I|L};[Q{I|L}]PE{I|L}{M(Oxidation (M))|F}H{I|L}K;[Q{I|L}]{I|L}PE{M(Oxidation (M))|F}HK{I|L};[Q{I|L}]{I|L}PE{M(Oxidation (M))|F}H{I|L}K;[Q{I|L}]P{I|L}E{M(Oxidation (M))|F}HK{I|L};[Q{I|L}]P{I|L}E{M(Oxidation (M))|F}H{I|L}K;[Q{I|L}]PE{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}K;[EP]{I|L}QQR{I|L}[Q{I|L}];{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KE{I|L}P[Q{I|L}];{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EK{I|L}P[Q{I|L}] 5.2095;5.1874;4.8934;4.8713;4.6027;4.5806;3.4058;3.3844;3.2851;3.2742 +;-;-;-;-;-;-;-;-;- + 1143 + 1 1.046 225199.1 1.0 10680 4925 15590 HBL1_DMSO_200M_050219_2,15607 HBL1_DMSO_200M_050219_2,15607,QLPELFHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15608 82.057 269.0 508340.0 25 0 52284.0 + 940 AFIQEAAAF 9 151 484.24719208746063 966.4798312417212 2 484.2471801638603 MULTI CID FTMS 0 0 0 15590 294157.25 1.0 0 0.0 18 Unmodified _AFIQEAAAF_ ENSG00000167302|ENST00000637944|TEPSIN;nc|ENSG00000167302|Q96N21|TEPSIN 28.486842064014134 0.1687311288560894 4 {[NV]|[RG]}E{M(Oxidation (M))|F}VA 6 7 23.32 0.0 0.0 2.4128 0.0 0.0 0.0 304.1251919197088 304.1251919197088 1.8929392831529768 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.9731975075880328 0.0 {[NV]|[RG]}E{M(Oxidation (M))|F}VA 2.4128 - 1302 1 1.046 105252.6 1.0 10681 4925 15590 HBL1_DMSO_200M_050219_2,15608 HBL1_DMSO_200M_050219_2,15608,AFIQEAAAF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15609 82.068 634.0 283930.0 25 0 14384.0 3109 AVPDLYFENA 10 190 569.7742857862625 1137.5340186393248 2 569.7754394412041 MULTI CID FTMS 0 0 0 15590 259217.1875 0.2233622908110003 6 -0.6736907958984375 19 Unmodified _AVPDLYFENA_ ENSG00000117298|ENST00000374893|ECE1;ENST00000526194.5_1_1:21560049-21616919:-|nuORF;nc|ENSG00000117298|P42892-2|ECE1;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1 14.838274106304384 0.5985701837916485 4 [DP]{I|L}Y{M(Oxidation (M))|F}ED 7 4 35.679 0.0 0.0 3.1365 0.0 0.0 0.0 255.13848576262484 255.13848576262484 16.514778379785888 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 0.0 [DP]{I|L}Y{M(Oxidation (M))|F}ED 3.1365 - 1585 1 1.046 139774.0 1.0 10682 4925 15590 HBL1_DMSO_200M_050219_2,15609 HBL1_DMSO_200M_050219_2,15609,AVPDLYFENA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15610 82.072 240.0 311060.0 25 0 47291.0 + 11877 GLVALTMGLL 10 118 494.3009582440282 986.5873635548564 2 494.3000366091728 MULTI CID FTMS 0 0 0 15590 249715.515625 1.0 0 0.0 20 Unmodified _GLVALTMGLL_ REV__ENSG00000213937|ENST00000445369|CLDN9 20.453626601364224 0.5043500229302764 4 [{I|L}P]{M(Oxidation (M))|F}{[QS]|[NT]}AV{I|L}{I|L} 9 -1 + 31.104 0.0 0.0 3.1527 3.1527 62.332 0.0 0.0 0.0 0.4823210968853111 6.41914005393453 0.4823210968853111 0.4823210968853111 0 0.8182503180159344 1.5228787452803376 0.0 0.0 [{I|L}P]{M(Oxidation (M))|F}{[QS]|[NT]}AV{I|L}{I|L};{[VA]|[{I|L}G]}A{[TV]|[{I|L}S]}MAV{I|L}{I|L};{[VA]|[{I|L}G]}A{[TV]|[{I|L}S]}CVV{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}{[QS]|[NT]}{I|L}G{I|L}{I|L};[VS][RV]MAV{I|L}{I|L};{[VA]|[{I|L}G]}A{[TV]|[{I|L}S]}M{I|L}G{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}{[QS]|[NT]}VA{I|L}{I|L};{[VA]|[{I|L}G]}A{[TV]|[{I|L}S]}MVA{I|L}{I|L};[VS][RV]CVV{I|L}{I|L};{[VA]|[{I|L}G]}A{[TV]|[{I|L}S]}{I|L}MG{I|L}{I|L} 3.1527;3.1038;2.7005;2.5425;2.5263;2.4936;2.2961;2.2472;2.1229;2.01 -;-;-;-;-;-;-;-;-;- 607 1 1.046 63519.9 1.0 10683 4925 15590 HBL1_DMSO_200M_050219_2,15610 HBL1_DMSO_200M_050219_2,15610,GLVALTMGLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15612 82.077 51.0 1355800.0 25 0 173470.0 + 42232 VSLGALMELI 10 95 523.3030805482477 1044.5916081632954 2 523.8040649294853 MULTI CID FTMS 0 0 0 15611 1351223.25 0.6028259657730836 2 -0.2666091918945312 1 Unmodified _VSLGALMELI_ REV__ENST00000261497.8_1_17:20903335-20903428:-|nuORF 10.073929032068715 0.6785112666868882 4 [KG]{I|L}DH{I|L}H{I|L}{I|L} 9 -1 + 34.779 0.0 0.0 3.3295 3.3295 73.261 0.0 0.0 0.0 1.938200260161132 6.618675552842397 1.938200260161132 7.385963389553115 0 0.0 0.0 0.4247425010840047 0.0 [KG]{I|L}DH{I|L}H{I|L}{I|L};[VS][C(Carbamidomethyl (C))R]{I|L}[VS][KP];[VS]{I|L}[C(Carbamidomethyl (C))R][VS][KP];{[QG]|[NA]}[RK]P{I|L}[{M(Oxidation (M))|F}T]V 3.3295;2.6224;2.046;0.37248 -;-;-;- 607 + 1 1.046 60631.3 1.0 10684 4926 15611 HBL1_DMSO_200M_050219_2,15612 HBL1_DMSO_200M_050219_2,15612,VSLGALMELI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15613 82.078 42.0 1436000.0 25 0 228940.0 + 1707 ALPLSEGTH 9 70 462.7437540417929 923.4729551503858 2 462.7438537478447 MULTI CID FTMS 0 0 0 15611 1262234.75 0.4785132719140686 12 -1.3220977783203125 2 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 15.847184025352805 0.4077185912009129 4 [{I|L}A]P{I|L} 4 -1 38.06 0.0 0.0 4.1214 0.0 0.0 0.0 526.1931246393186 526.1931246393186 26.46591250700361 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P{I|L} 4.1214 + + 13 + 1 1.046 51763.2 1.0 10685 4926 15611 HBL1_DMSO_200M_050219_2,15613 HBL1_DMSO_200M_050219_2,15613,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15614 82.079 63.0 1067600.0 25 0 180830.0 + 30123 QVKFLSALLT 10 93 560.3398734593414 1118.6651939854828 2 560.3401367068291 MULTI CID FTMS 0 0 0 15611 790062.5625 0.3670620265957193 -1 0.0918350219726562 3 Unmodified _QVKFLSALLT_ REV__ENSG00000072756|ENST00000251607|TRNT1;REV__nc|ENSG00000072756|Q96Q11-2|TRNT1 6.723162845929126 0.6955379296933136 4 {I|L} 1 -1 11.109 0.0 0.0 0.99308 0.0 0.0 987.5700687186844 0.0 987.5700687186844 0.0 4.995163750557001 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.99308 + + 44 + 1 1.046 60142.5 1.0 10686 4926 15611 HBL1_DMSO_200M_050219_2,15614 HBL1_DMSO_200M_050219_2,15614,QVKFLSALLT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15615 82.082 119.0 1041500.0 25 0 173500.0 -1 IASVCYLD 8 105 470.7263908802107 939.4382288272216 2 470.7266113162041 MULTI CID FTMS 0 0 0 15611 667766.8125 0.2099061787797662 -15 1.5796966552734375 4 Carbamidomethyl (C) _IASVC(Carbamidomethyl (C))YLD_ ENST00000373479.8_1_6:37321761-37321914:+|nuORF 24.67388899826682 0.525179942228231 4 {I|L}AS 3 -1 48.857 0.0 0.0 5.2006 0.0 0.0 0.0 665.264669770468 665.264669770468 12.77134361166688 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 {I|L}AS 5.2006 + + 237 + 1 1.046 100988.3 1.0 10687 4926 15611 HBL1_DMSO_200M_050219_2,15615 HBL1_DMSO_200M_050219_2,15615,IASVCYLD False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15616 82.083 67.0 1479200.0 25 0 172200.0 + 25080 MPVQFQVV 8 97 474.2545381011649 946.4945232691298 2 474.2549011111259 MULTI CID FTMS 0 0 0 15611 612917.3125 1.0 0 0.0 5 Unmodified _MPVQFQVV_ ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC 26.34127834903884 0.4900704351052977 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NP]{M(Oxidation (M))|F}QVV 8 2 + 39.927 0.0 0.0 4.2184 4.2184 67.583 0.0 0.0 0.0 1.5836249209525022 6.952555991757095 1.5836249209525022 1.5836249209525022 0 0.6237125054200234 2.0 0.0 0.3054621874040891 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NP]{M(Oxidation (M))|F}QVV;[{I|L}P]NM{M(Oxidation (M))|F}QVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}NMQVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}NQMVV;NP{M(Oxidation (M))|F}{I|L}MQVV;[{I|L}P]N{M(Oxidation (M))|F}MQVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NP]{M(Oxidation (M))|F}[AG]VV;[{I|L}P]NM{M(Oxidation (M))|F}[AG]VV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}NM[AG]VV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}GGMQVV 4.2184;4.0511;4.0379;3.7199;3.4838;3.3079;3.2398;3.0725;3.0594;3.0594 -;-;-;-;-;-;-;-;-;- 541 1 1.046 80261.2 1.0 10688 4926 15611 HBL1_DMSO_200M_050219_2,15616 HBL1_DMSO_200M_050219_2,15616,MPVQFQVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15617 82.087 183.0 549100.0 25 0 41488.0 + 13183 HGFAGYFETV 10 95 564.2611528172888 1126.5077527013775 2 564.2615844607353 MULTI CID FTMS 0 0 0 15611 577593.6875 0.4878667579596751 -1 0.0918350219726562 6 Unmodified _HGFAGYFETV_ ENSG00000100462|ENST00000324366|PRMT5;ENST00000557758.1_1_14:23391634-23392032:-|nuORF;nc|ENSG00000100462|O14744-2|PRMT5;nc|ENSG00000100462|O14744-3|PRMT5;nc|ENSG00000100462|O14744-4|PRMT5;nc|ENSG00000100462|O14744-5|PRMT5 70.71552829651908 0.0189135702660538 4 [DP]VTGY{M(Oxidation (M))|F}E 8 6 60.211 0.0 0.0 5.345 0.0 0.0 0.0 215.10070935627428 215.10070935627428 -1.154142991889053 0.0 -1.154142991889053 0.0 0 0.75 1.154901959985743 1.381810887670697 0.0 [DP]VTGY{M(Oxidation (M))|F}E 5.345 - 1321 1 1.046 85569.2 1.0 10689 4926 15611 HBL1_DMSO_200M_050219_2,15617 HBL1_DMSO_200M_050219_2,15617,HGFAGYFETV True True HGFAGYFETV 82.087028 564.261584460735 20739824.0 15611.0 nc|ENSG00000100462|O14744-5|PRMT5;;nc|ENSG00000100462|O14744-2|PRMT5;;ENSG00000100462|ENST00000324366|PRMT5;;ENST00000557758.1_1_14:23391634-23392032:-|nuORF;;nc|ENSG00000100462|O14744-4|PRMT5;;nc|ENSG00000100462|O14744-3|PRMT5 7.828798611958821 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15618 82.09 144.0 634140.0 25 0 103280.0 -1 ALLETYCA 8 93 314.15345579277783 939.4385379785336 3 314.1532165408134 MULTI CID FTMS 0 0 0 15611 509643.875 0.2584039328167051 18 -1.9554595947265625 7 Carbamidomethyl (C) _ALLETYC(Carbamidomethyl (C))A_ ENSG00000167244|ENST00000416167|IGF2;nc|ENSG00000167244|P01344-2|IGF2;nc|ENSG00000167244|P01344-3|IGF2 26.88365393820708 0.4786498634179528 4 A{I|L}S 3 -1 50.507 0.0 0.0 5.3763 0.0 0.0 0.0 665.263914056281 665.263914056281 41.55430814516399 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.3807196863200844 0.0 A{I|L}S 5.3763 - 41 + 1 1.046 82359.5 1.0 10690 4926 15611 HBL1_DMSO_200M_050219_2,15618 HBL1_DMSO_200M_050219_2,15618,ALLETYCA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15619 82.099 534.0 339390.0 25 0 64658.0 -1 KPRCWLKITPV 11 152 699.4083671219623 1396.8021813107246 2 699.4086181521416 MULTI CID FTMS 0 0 0 15611 413969.8125 0.7623596383085569 -2 0.1970367431640625 8 Carbamidomethyl (C) _KPRC(Carbamidomethyl (C))WLKITPV_ ENST00000468437.1_1_1:84972553-84972652:+|nuORF 2.498486711656943 0.8633599123570009 4 {[QN]|[E{I|L}]|[KN]}WAS{I|L}[VG]{I|L}{I|L} 10 -1 35.552 0.0 0.0 2.5452 0.0 0.0 0.0 312.1724380575569 312.1724380575569 21.84152181326482 0.0 0.0 0.0 0 0.0 0.6020599913279624 0.7742275032520141 0.0 {[QN]|[E{I|L}]|[KN]}WAS{I|L}[VG]{I|L}{I|L} 2.5452 - 1294 1 1.046 145609.8 1.0 10691 4926 15611 HBL1_DMSO_200M_050219_2,15619 HBL1_DMSO_200M_050219_2,15619,KPRCWLKITPV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15620 82.109 536.0 613960.0 25 0 63479.0 -1 SMCILNGGGI 10 176 490.7325581338665 979.4505633345332 2 490.7329589724541 MULTI CID FTMS 0 0 0 15611 407777.5625 0.5515025357342979 -2 0.1970367431640625 9 Oxidation (M) _SM(Oxidation (M))CILNGGGI_ ENSG00000135318|ENST00000257770|NT5E;nc|ENSG00000135318|P21589-2|NT5E 27.628801355627647 0.3479284626772844 4 [{I|L}T]C{I|L}V 5 -1 41.682 0.0 0.0 4.2557 0.0 0.0 0.0 447.136615918567 447.136615918567 4.062959475437751 0.0 0.0 0.0 0 0.5 2.0 0.3494850021680094 0.0 [{I|L}T]C{I|L}V 4.2557 - 2164 1 1.046 247739.2 1.0 10692 4926 15611 HBL1_DMSO_200M_050219_2,15620 HBL1_DMSO_200M_050219_2,15620,SMCILNGGGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15621 82.119 581.0 606930.0 25 0 57191.0 + 12713 GVLSSDGVWRV 11 173 587.8143947223818 1173.6142365115636 2 587.8144409060478 MULTI CID FTMS 0 0 0 15611 322744.625 0.0635315873387852 -2 0.1970367431640625 10 Unmodified _GVLSSDGVWRV_ ENSG00000125459|ENST00000245564|MSTO1;ENST00000483734.5_1_1:155580745-155584061:+|nuORF;nc|ENSG00000125459|Q9BUK6-2|MSTO1;nc|ENSG00000125459|Q9BUK6-3|MSTO1 71.70789743142352 0.0274550572689813 4 [VG]{I|L}SSDVGWVR 11 4 + 104.4 0.0 0.0 8.8952 8.8952 84.472 0.0 0.0 0.0 23.582367697242105 3.200071505639912 3.200071505639912 2.7422750325201406 0 2.138210492164445 1.6989700043360187 1.1307196863200843 0.6237125054200234 [VG]{I|L}SSDVGWVR;[VG]{I|L}SSDGVWVR;[VG]{I|L}SSDVGWRV;[VG]{I|L}SSDGVWRV;[VG]{I|L}SSDVGVWR;[VG]{I|L}SVSDGWVR;[VG]{I|L}SSVDGWVR;[VG]{I|L}SSDGVVWR;[VG]{I|L}SVSDGWRV;[VG]{I|L}SSVDGWRV 8.8952;8.6616;8.6225;8.3889;8.2427;8.2164;8.1751;8.009;7.9438;7.9025 -;-;-;+;-;-;-;-;-;- + 14229 + 1 1.046 259281.7 1.0 10693 4926 15611 HBL1_DMSO_200M_050219_2,15621 HBL1_DMSO_200M_050219_2,15621,GVLSSDGVWRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15622 82.131 667.0 554830.0 25 0 53716.0 + 34613 SPLGSMPEI 9 217 465.73362650509785 929.4527000769956 2 465.7338134646416 MULTI CID FTMS 0 0 0 15611 309072.25 1.0 0 0.0 11 Unmodified _SPLGSMPEI_ chr2:230221784-230225535|39|15.72|0.43|5.19|-|ENST00000540870|SP110,SP110;ENSG00000135899|ENST00000258381|SP110;ENST00000486146.2_1_2:231068050-231077551:-|nuORF;ENST00000490880.5_1_2:231065532-231076254:-|nuORF;nc|ENSG00000135899|Q9HB58-2|SP110;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110 92.8221339359638 0.0138398038803217 4 [{I|L}P]SGSMPE{I|L} 9 2 + 80.522 0.0 0.0 8.6634 8.6634 82.084 0.0 0.0 0.0 1.5839172150142955 14.973024840566469 1.5839172150142955 1.5839172150142955 0 0.5 1.6989700043360187 2.249134866972623 0.0 [{I|L}P]SGSMPE{I|L};[EP]KSMPE{I|L};[{I|L}P]GSSMPE{I|L};[{I|L}P]SGMSPE{I|L};[PS]{I|L}GSMPE{I|L};{[TV]|[{I|L}S]}PGSMPE{I|L};[EP]KMSPE{I|L};[{I|L}P]GSMSPE{I|L};[TP]VGSMPE{I|L};[{I|L}P]SMGSPE{I|L} 8.6634;8.493;8.4379;7.4023;7.398;7.3186;7.2319;7.1768;6.9814;6.3235 -;-;-;-;+;-;-;-;-;- + 1874 1 1.046 279354.3 1.0 10694 4926 15611 HBL1_DMSO_200M_050219_2,15622 HBL1_DMSO_200M_050219_2,15622,SPLGSMPEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15623 82.144 800.0 344340.0 25 0 31283.0 + 18867 LASQHEEL 8 242 309.49051870186247 925.4497267057876 3 309.4899780154228 MULTI CID FTMS 0 0 0 15611 247683.125 0.6428460659007531 15 -1.5979843139648438 12 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 4 {I|L}{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 1.7779 0.0 0.0 647.3027023480824 0.0 647.3027023480824 0.0 2.4742501084004687 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.7779 - 597 1 1.046 218636.6 0.9399999976158142 10695 4926 15611 HBL1_DMSO_200M_050219_2,15623 HBL1_DMSO_200M_050219_2,15623,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15624 82.147 144.0 577450.0 25 0 66863.0 + 39707 NLYPFVKTV 9 125 541.7763586424993 1081.5381643517983 2 541.7740966677666 MULTI CID FTMS 0 0 0 15611 225799.53125 1.0 0 0.0 13 Unmodified _VEGSHKSPLE_ ENSG00000138363|ENST00000236959|ATIC;ENST00000427397.5_1_2:216176945-216197107:+|nuORF;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC 22.736283301280096 0.4578556481593033 4 NYDP{M(Oxidation (M))|F}VKS{I|L} 9 8 + 41.041 0.0 0.0 3.7947 3.7947 70.222 0.0 0.0 0.0 9.208187539523747 3.679767852945936 3.679767852945936 3.679767852945936 0 0.0 0.0 0.5 0.0 NYDP{M(Oxidation (M))|F}VKS{I|L};NYDP{M(Oxidation (M))|F}VKTV;NYDP{M(Oxidation (M))|F}[KS]V{I|L};NYDP{M(Oxidation (M))|F}[KS]{I|L}V;[TP]PVVVPD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[VP][TP]VVPD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 3.7947;3.4544;1.7821;1.4419;0.61623;0.29377 -;-;-;-;-;- 666 + 1 1.046 71153.4 1.0 10696 4926 15611 HBL1_DMSO_200M_050219_2,15624 HBL1_DMSO_200M_050219_2,15624,VEGSHKSPLE False False NLYPFVKTV 82.147209 541.774096667767 0.0 15611.0 ENSG00000138363|ENST00000236959|ATIC;;ENST00000427397.5_1_2:216176945-216197107:+|nuORF;;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;;nc|ENSG00000138363|P31939-2|ATIC 0.6995846430460612 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15625 82.153 245.0 523980.0 25 0 93702.0 + 27365 PIAARRPRLS 10 137 568.8531210164417 1135.6916890996831 2 568.8535644412041 MULTI CID FTMS 0 0 0 15611 208076.953125 0.2855204000404109 -1 0.0918350219726562 14 Unmodified _PIAARRPRLS_ REV__ENST00000368194.7_1_1:156921476-156926255:-|nuORF 4.3292370932331545 0.7066112369704343 4 [{I|L}P]DY{M(Oxidation (M))|F} 5 -1 18.416 0.0 0.0 1.6216 0.0 0.0 0.0 497.3739760472021 497.3739760472021 7.447274948966935 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [{I|L}P]DY{M(Oxidation (M))|F} 1.6216 - 131 1 1.046 99082.1 1.0 10697 4926 15611 HBL1_DMSO_200M_050219_2,15625 HBL1_DMSO_200M_050219_2,15625,PIAARRPRLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15626 82.166 714.0 239440.0 25 0 18481.0 + 13914 HVVERLFEI 9 174 571.3226081668655 1140.630663400531 2 571.3217040896416 MULTI CID FTMS 0 0 0 15611 212759.5625 0.9951500309801072 1 -0.1595535278320312 15 Unmodified _HVVERLFEI_ ENSG00000277462|ENST00000366503|ZNF670 51.41523569358685 0.0372669606867193 4 HV{I|L}DP 5 6 64.623 0.0 0.0 5.6655 0.0 0.0 0.0 576.3105562799436 576.3105562799436 33.334500239096414 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.3807196863200844 0.0 HV{I|L}DP 5.6655 - 2146 + 1 1.046 130142.2 1.0 10698 4926 15611 HBL1_DMSO_200M_050219_2,15626 HBL1_DMSO_200M_050219_2,15626,HVVERLFEI True True HVVERLFEI 82.165645 571.321704089642 2113602.25 15611.0 ENSG00000277462|ENST00000366503|ZNF670 4.983653863271077 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15627 82.178 716.0 159480.0 25 0 49703.0 + + -1 AYFEKTQEELTPF 13 112 801.8867638175425 0 801.8862182497978 PEAK CID FTMS 0 0 0 15611 205064.578125 1.0 0 0.0 16 Carbamidomethyl (C) _LWC(Carbamidomethyl (C))LMRDWYLF_ P81644 1.4819007175156935 0.4761840153648598 4 T{I|L}EEQTKE{M(Oxidation (M))|F}D 10 -1 63.837 0.0 0.0 3.9854 0.0 0.0 262.1249062987743 116.05113397769765 378.176040276472 0.0 0.0 0.0 0.0 0 0.5 0.0 1.1237125054200234 0.0 T{I|L}EEQTKE{M(Oxidation (M))|F}D 3.9854 - 5186 + 1 1.046 82004.1 1.0 10699 4926 15611 HBL1_DMSO_200M_050219_2,15627 HBL1_DMSO_200M_050219_2,15627,LWCLMRDWYLF False False AYFEKTQEELTPF 82.178095 801.886218249798 2429686.0 15611.0 P81644 8.641156196594238 2.0 False 13.0 True unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15628 82.191 773.0 423080.0 25 0 29947.0 + 15536 IPVPTITWI 9 234 520.3138957231034 1038.6132385130068 2 520.3156005740166 MULTI CID FTMS 0 0 0 15611 187059.59375 0.2322681504121446 13 -1.3987960815429688 17 Unmodified _IPVPTITWI_ ENSG00000030304|ENST00000374448|MUSK;nc|ENSG00000030304|O15146-2|MUSK;nc|ENSG00000030304|O15146-3|MUSK 44.40701690623563 0.0526327925666318 4 {I|L}PPE{I|L}{I|L}MKV 9 6 + 67.444 0.0 0.0 6.4936 6.4936 91.886 0.0 0.0 0.0 43.3663062014062 9.013751764606925 9.013751764606925 27.40714423514468 0 1.274227503252014 2.0 0.25 0.1803115997617927 {I|L}PPE{I|L}{I|L}MKV;{I|L}PV[RH][YR]V;{I|L}PV[RH][HA]P{I|L};{I|L}PPHH[R{I|L}]G{I|L};{I|L}PP[YQ]{I|L}VP{I|L};{I|L}PPHH[R{I|L}]AV;{I|L}PPHH[RV]A{I|L};{I|L}PP[YQ]{I|L}{I|L}PV;{I|L}T{I|L}K{I|L}[HD]S{I|L};{I|L}T{I|L}K{I|L}[HD]TV 6.4936;3.8548;3.8177;3.439;3.2922;3.1093;2.6405;2.5171;1.8509;1.5212 -;-;-;-;-;-;-;-;-;- 2047 + 1 1.046 253551.6 1.0 10700 4926 15611 HBL1_DMSO_200M_050219_2,15628 HBL1_DMSO_200M_050219_2,15628,IPVPTITWI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15629 82.206 768.0 300570.0 25 0 18747.0 + -1 PMNVYVNNM 9 218 549.2432030004906 1096.471853067781 2 549.2433349490166 MULTI CID FTMS 0 0 0 15611 188139.84375 0.6802250892866222 4 -0.5202789306640625 18 Oxidation (M) _PM(Oxidation (M))NVYVNNM_ REV__ENSG00000180730|ENST00000319420|SHISA2 21.74664581756881 0.2544899275067181 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}[HK]{M(Oxidation (M))|F}D 8 -1 + 44.671 0.0 0.0 4.0741 4.0741 68.4 0.0 0.0 0.0 5.615750058705928 4.317496819840656 4.317496819840656 2.22811589762955 0 0.3807196863200844 2.0 0.5 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}[HK]{M(Oxidation (M))|F}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]{I|L}{[HG]|PP}{M(Oxidation (M))|F}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}C(Carbamidomethyl (C)){M(Oxidation (M))|F}[HK]D{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}V[YT]NP{M(Oxidation (M))|F}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]{I|L}{[HG]|PP}D{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[H{I|L}]Q{[HG]|PP}{M(Oxidation (M))|F}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KS]Y{[HG]|PP}{M(Oxidation (M))|F}D;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[CG]{M(Oxidation (M))|F}[HK]{M(Oxidation (M))|F}D;{[QN]|[E{I|L}]|[KN]}V[YT]NPD{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]V[HA]{M(Oxidation (M))|F}D 4.0741;3.8708;3.6803;3.5619;3.4771;3.3746;3.2334;3.2293;3.1681;3.1571 -;-;-;-;-;-;-;-;-;- 4378 1 1.046 180923.0 1.0 10701 4926 15611 HBL1_DMSO_200M_050219_2,15629 HBL1_DMSO_200M_050219_2,15629,PMNVYVNNM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15630 82.22 800.0 235590.0 25 0 35829.0 + 29690 QPFERLFKV 9 180 388.5572836977189 1162.6500216933566 3 388.5571166872978 MULTI CID FTMS 0 0 0 15611 166808.578125 1.0 0 0.0 19 Unmodified _QPFERLFKV_ ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 36.506200033944 0.094635877243972 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}RE{M(Oxidation (M))|F}[QP]V 9 5 + 29.944 0.0 0.0 2.5755 2.5755 67.014 0.0 0.0 0.0 2.191512336730032 6.411509892272992 2.191512336730032 3.440389062743336 0 0.3054621874040891 0.0 0.4247425010840047 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}RE{M(Oxidation (M))|F}[QP]V;[{M(Oxidation (M))|F}E][R{I|L}]{M(Oxidation (M))|F}[QP]KV;QPV{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}R{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F}R{M(Oxidation (M))|F}[QP]V;Q[{I|L}T]{M(Oxidation (M))|F}ER{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}R[QP]V;QP{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]R{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};Q[{I|L}T]K{M(Oxidation (M))|F}{[WN]|[YH]}KV;[H{I|L}][HA]HP[QP]KV;[H{I|L}]G[{I|L}P]R{M(Oxidation (M))|F}[QP]V 2.5755;2.2795;2.2079;2.2074;2.1442;2.1;2.0368;1.9742;1.8617;1.8103 -;-;-;-;-;-;-;-;-;- 736 1 1.046 155849.4 0.9200000166893004 10702 4926 15611 HBL1_DMSO_200M_050219_2,15630 HBL1_DMSO_200M_050219_2,15630,QPFERLFKV True False QPFERLFKV 82.219763 388.557116687298 1382477.25 15611.0 ENSG00000086758|ENST00000262854|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 2.200757622718811 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15631 82.232 703.0 178420.0 25 0 14374.0 + -1 ICKQNKTCKF 10 152 635.3263366171713 1268.6381203011424 2 635.3258544802666 MULTI CID FTMS 0 0 0 15611 174632.8125 1.0 0 0.0 20 Carbamidomethyl (C) _IC(Carbamidomethyl (C))KQNKTCKF_ REV__ENSG00000168702|ENST00000389484|LRP1B 17.11289562659939 0.5604042439455784 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TQT 10 -1 61.7 0.0 0.0 4.8635 0.0 0.0 0.0 163.06953194303324 163.06953194303324 22.711892990699383 0.0 0.0 0.0 0 0.0 2.0 0.805462187404089 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TQT 4.8635 - 10317 1 1.046 98106.2 1.0 10703 4926 15611 HBL1_DMSO_200M_050219_2,15631 HBL1_DMSO_200M_050219_2,15631,ICKQNKTCKF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15633 82.236 1.3 38542000.0 25 0 7863000.0 + 15566 IPYHIVNIV 9 69 534.315955407261 1066.6173578813218 2 534.3164550662041 MULTI CID FTMS 0 0 0 15632 39449504.0 1.0 0 0.0 1 Unmodified _IPYHIVNIV_ ENSG00000031698|ENST00000234677|SARS1 26.34127834903884 0.1960301806784604 4 {[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}VN{I|L}V 9 3 + 43.574 0.0 0.0 4.0852 4.0852 67.53 0.0 0.0 0.0 2.04119982655925 10.330145895351848 2.04119982655925 1.7609125905568137 0 0.7429928190999391 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}VN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]VN{I|L}{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}VN{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}VN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]V{I|L}N{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}V{I|L}N{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}VGG{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]VGG{I|L}{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}VGG{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}VGG{I|L}{I|L}V 4.0852;3.9201;3.8939;3.7288;3.6379;3.4465;3.2219;3.0568;3.0306;2.8655 -;-;-;-;-;-;-;-;-;- 172 1 1.039 48222.0 1.0 10704 4927 15632 HBL1_DMSO_200M_050219_2,15633 HBL1_DMSO_200M_050219_2,15633,IPYHIVNIV False True IPYHIVNIV 82.236194 534.316455066204 1531831424.0 15632.0 ENSG00000031698|ENST00000234677|SARS1 5.939715544382731 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15634 82.237 6.3 10403000.0 25 0 1086000.0 + 3897 DALDKIRLI 9 98 528.8237779724682 1055.6330030117365 2 528.8248168826103 MULTI CID FTMS 0 0 0 15632 2955253.75 0.0331654905207138 4 -0.42230224609375 2 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 22.736283301280096 0.2418982879461534 4 {[DA]|[EG]}{I|L}DK{I|L}[R{I|L}]{I|L} 9 0 + 45.34 0.0 0.0 4.295 4.295 83.811 0.0 0.0 0.0 6.293709283484077 6.962724883926654 6.293709283484077 45.339862491657854 0 0.4247425010840047 1.3979400086720375 0.0 0.0 + + {[DA]|[EG]}{I|L}DK{I|L}[R{I|L}]{I|L} 4.295 + + 216 + 1 1.039 53919.4 1.0 10705 4927 15632 HBL1_DMSO_200M_050219_2,15634 HBL1_DMSO_200M_050219_2,15634,DALDKIRLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15635 82.239 6.7 10409000.0 25 0 1121500.0 28806 PYTCVSCGAR 10 92 528.7315443226397 1055.448535712079 2 528.7325317263603 MULTI CID FTMS 0 0 0 15632 7506252.0 1.0 0 0.0 3 Unmodified _PYTCVSCGAR_ ENSG00000106400|ENST00000305105|ZNHIT1;ENST00000485387.1_1_7:100865814-100867236:+|nuORF;ENST00000492315.5_1_7:100864992-100867236:+|nuORF 25.399314129420983 0.3980215340001851 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TMP{I|L} 6 7 44.619 0.0 0.0 4.2275 0.0 0.0 0.0 350.0834593783481 350.0834593783481 12.503859178250778 0.0 0.0 0.0 0 0.9247425010840048 1.0969100130080565 1.1549471895720984 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TMP{I|L} 4.2275 - 254 1 1.039 60176.1 1.0 10706 4927 15632 HBL1_DMSO_200M_050219_2,15635 HBL1_DMSO_200M_050219_2,15635,PYTCVSCGAR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15636 82.24 16.0 3610800.0 25 0 200840.0 + 9913 FPFYGKPMRI 10 56 628.3361852914626 1254.657817649725 2 628.3369628787041 MULTI CID FTMS 0 0 0 15632 2731936.25 1.0 0 0.0 4 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 29.081581746732265 0.3152867722954398 4 P[W{I|L}]KGY{M(Oxidation (M))|F}PE 9 8 52.101 0.0 0.0 4.1526 0.0 0.0 119.07409865547032 0.0 119.07409865547032 0.0 33.3771376077312 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 P[W{I|L}]KGY{M(Oxidation (M))|F}PE 4.1526 - 181 1 1.039 49732.3 1.0 10707 4927 15632 HBL1_DMSO_200M_050219_2,15636 HBL1_DMSO_200M_050219_2,15636,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15637 82.241 29.0 3472000.0 25 0 265870.0 + 14024 IAGPGFINV 9 93 887.4974221407588 886.4901456741587 1 887.4974853396416 MULTI CID FTMS 0 0 0 15632 1788164.875 1.0 0 0.0 5 Unmodified _IAGPGFINV_ ENSG00000113643|ENST00000231572|RARS1;ENST00000521939.5_1_5:167913503-167921691:+|nuORF;nc|ENSG00000113643|P54136-2|RARS1 57.47134341890925 0.0274820932774257 4 {[QV]|[N{I|L}]|[RA]|[KV]}M{I|L}A{I|L}NV 8 5 + 53.919 0.0 0.0 6.0824 6.0824 77.978 0.0 0.0 0.0 5.484550065040281 23.69936104735972 5.484550065040281 3.0102999566398125 0 0.7302046884880937 0.0 0.0 0.3252574989159953 {[QV]|[N{I|L}]|[RA]|[KV]}M{I|L}A{I|L}NV;{[QV]|[N{I|L}]|[RA]|[KV]}MA{I|L}{I|L}NV;[NP]{M(Oxidation (M))|F}{I|L}A{I|L}NV;{[QV]|[N{I|L}]|[RA]|[KV]}M{I|L}{I|L}ANV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}MA{I|L}NV;[NP]{M(Oxidation (M))|F}A{I|L}{I|L}NV;{[QV]|[N{I|L}]|[RA]|[KV]}M{I|L}A{I|L}GGV;{[QV]|[N{I|L}]|[RA]|[KV]}MA{I|L}{I|L}GGV;[NP]A{M(Oxidation (M))|F}{I|L}{I|L}NV;[NP]{M(Oxidation (M))|F}{I|L}{I|L}ANV 6.0824;5.7428;5.4032;5.1499;5.129;5.0636;5.0375;4.698;4.5254;4.4708 -;-;-;-;-;-;-;-;-;- 1355 1 1.039 72021.7 1.0 10708 4927 15632 HBL1_DMSO_200M_050219_2,15637 HBL1_DMSO_200M_050219_2,15637,IAGPGFINV True True IAGPGFINV 82.240921 887.497485339642 15059755.0 15632.0 nc|ENSG00000113643|P54136-2|RARS1;;ENST00000521939.5_1_5:167913503-167921691:+|nuORF;;ENSG00000113643|ENST00000231572|RARS1 6.59648863474528 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15638 82.242 38.0 1258600.0 25 0 259660.0 -1 MPEGGCAPILL 11 78 579.2880060373891 1156.561459141578 2 579.2888061404228 MULTI CID FTMS 0 0 0 15632 1545859.875 0.4686097368408687 -2 0.2513885498046875 6 Carbamidomethyl (C) _MPEGGC(Carbamidomethyl (C))APILL_ ENST00000491614.5_1_10:12237811-12237910:-|nuORF 29.081581746732265 0.4093582134107448 4 TP{I|L}{I|L}{I|L} 5 -1 41.454 0.0 0.0 3.5842 0.0 0.0 601.2023792951187 0.0 601.2023792951187 0.0 10.885000250659616 0.0 0.0 0 0.5 0.0 1.1989700043360187 0.0 TP{I|L}{I|L}{I|L} 3.5842 - 237 1 1.039 39742.8 1.0 10709 4927 15632 HBL1_DMSO_200M_050219_2,15638 HBL1_DMSO_200M_050219_2,15638,MPEGGCAPILL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15639 82.243 35.0 1374600.0 25 0 141680.0 + 22532 LPWGDPSQI 9 80 506.7587970229282 1011.5030411126564 2 506.7587768435478 MULTI CID FTMS 0 0 0 15632 1451291.375 0.5423032086339309 1 -0.1070556640625 7 Unmodified _LPWGDPSQI_ ENSG00000134758|ENST00000261593|RNF138;ENST00000502765.1_1_5:54825986-54826487:-|nuORF;nc|ENSG00000134758|Q8WVD3-2|RNF138 46.92087301778293 0.0471210510596396 4 [WP]GD{I|L}[PS]Q{I|L} 9 2 + 38.756 0.0 0.0 3.8315 3.8315 67.7 0.0 0.0 0.0 2.272437815030628 3.70195086035649 2.272437815030628 2.272437815030628 0 0.2887254899964357 0.0 0.8807196863200843 0.5 [WP]GD{I|L}[PS]Q{I|L};[{I|L}P]W[DG][PS]Q{I|L};{[WT]|[RM]}R[DG]HQ{I|L};[PS]QQQ[PS]Q{I|L};{[QN]|[E{I|L}]|[KN]}YY[PS]Q{I|L};{[QN]|[E{I|L}]|[KN]}YY[PS]K{I|L};[WP]{I|L}[DG][PS]Q{I|L};[WP]GD{I|L}[PS][AG]{I|L};{[WT]|[RM]}R{I|L}DG[HQ];[VP]D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PS]K{I|L} 3.8315;3.6069;3.4655;2.9354;2.8254;2.8254;2.573;2.4269;2.4152;2.3031 -;+;-;-;-;-;-;-;-;- + 371 1 1.039 45533.4 1.0 10710 4927 15632 HBL1_DMSO_200M_050219_2,15639 HBL1_DMSO_200M_050219_2,15639,LPWGDPSQI True True LPWGDPSQI 82.24328 506.758776843548 47163124.0 15632.0 nc|ENSG00000134758|Q8WVD3-2|RNF138;;ENSG00000134758|ENST00000261593|RNF138;;ENST00000502765.1_1_5:54825986-54826487:-|nuORF 2.843453129132589 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15640 82.245 46.0 1703200.0 25 0 219570.0 + 31871 RTLDELGIHL 10 66 583.8302663516229 1165.6459797700456 2 583.8304321169853 MULTI CID FTMS 0 0 0 15632 1043139.0 0.5522460794032513 -1 0.1595535278320312 8 Unmodified _RTLDELGIHL_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 27.22323531849824 0.3570408936368626 4 E{I|L}G{I|L}H{I|L} 6 4 57.211 0.0 0.0 4.9081 0.0 0.0 485.26042560857366 0.0 485.26042560857366 0.0 43.2319095436452 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 + E{I|L}G{I|L}H{I|L} 4.9081 + + 38 1 1.039 62859.9 1.0 10711 4927 15632 HBL1_DMSO_200M_050219_2,15640 HBL1_DMSO_200M_050219_2,15640,RTLDELGIHL False True RTLDELGIHL 82.244538 583.830432116985 11582268.0 15632.0 nc|ENSG00000108883|Q15029-3|EFTUD2;;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 4.847049077351888 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15641 82.246 74.0 1014800.0 25 0 177490.0 + 1235 AIIPRVPSL 9 70 483.3108875303943 0 483.3108398318291 PEAK CID FTMS 0 0 0 15632 647464.5625 0.6526757294853767 -2 0.2513885498046875 9 Unmodified _AIIPRVPSL_ ENSG00000152464|ENST00000378197|RPP38 36.12702656103203 0.0807574182900477 4 {I|L}{I|L}W 3 7 20.362 0.0 0.0 2.1109 0.0 0.0 184.12075899064865 365.2205599420532 549.3413189327018 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {I|L}{I|L}W 2.1109 - 88 + 1 1.039 63717.9 1.0 10712 4927 15632 HBL1_DMSO_200M_050219_2,15641 HBL1_DMSO_200M_050219_2,15641,AIIPRVPSL True True AIIPRVPSL 82.246265 483.310839831829 47921568.0 15632.0 ENSG00000152464|ENST00000378197|RPP38 1.8807609472423792 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15642 82.248 85.0 627490.0 25 0 117030.0 34268 SLQLVVWL 8 92 479.2937101543786 956.5728673755572 2 479.2944824099541 MULTI CID FTMS 0 0 0 15632 560609.375 0.2546268434702433 -2 0.2513885498046875 10 Unmodified _SLQLVVWL_ ENST00000357814.7_2_17:72767623-72767866:-|nuORF 23.1484247019978 0.5573009939494978 4 {[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}[RD]{I|L}{I|L} 8 5 + 34.521 0.0 0.0 3.6088 3.6088 78.497 0.0 0.0 0.0 12.341532552839013 2.61947817248646 2.61947817248646 12.341532552839013 0 0.5796896906561032 2.0 0.6382104921644451 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}[RD]{I|L}{I|L};[KA]E{I|L}[RD]{I|L}{I|L};{[TV]|[{I|L}S]}Q{I|L}[RD]{I|L}{I|L};[VG]AT{I|L}[RD]{I|L}{I|L};[{I|L}A][SG]{I|L}[RD]{I|L}{I|L};{[TV]|[{I|L}S]}[AG]{I|L}[RD]{I|L}{I|L};[KA][RN]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L};{[QG]|[NA]}[RK]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L};{[QG]|[NA]}KK[RD]{I|L}{I|L} 3.6088;2.3186;2.062;1.9762;1.6965;1.0937;0.50473;0.066644;0.066644 -;-;-;-;-;-;-;-;- 260 1 1.039 46014.6 1.0 10713 4927 15632 HBL1_DMSO_200M_050219_2,15642 HBL1_DMSO_200M_050219_2,15642,SLQLVVWL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15643 82.256 419.0 663390.0 25 0 96992.0 + 36265 SYFEKETLTF 10 169 632.8083214162285 1263.602089899257 2 632.8091918826103 MULTI CID FTMS 0 0 0 15632 480943.09375 0.3361860466457411 -2 0.2513885498046875 11 Unmodified _SYFEKETLTF_ ENSG00000196705|ENST00000311048|ZNF431 86.2760493876774 0.0119243468329752 4 [{I|L}T]TRT{M(Oxidation (M))|F}{M(Oxidation (M))|F}MT{M(Oxidation (M))|F} 10 8 + 76.858 0.0 0.0 6.0824 6.0824 81.428 0.0 0.0 0.0 5.346084010736618 11.308422131034844 5.346084010736618 5.346084010736618 0 1.674742501084005 1.0969100130080565 2.559894379144197 0.0 [{I|L}T]TRT{M(Oxidation (M))|F}{M(Oxidation (M))|F}MT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}EKET{I|L}T{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F}MT{M(Oxidation (M))|F};[{I|L}T]TRT{M(Oxidation (M))|F}{M(Oxidation (M))|F}EC{M(Oxidation (M))|F};[{I|L}T]TRT{M(Oxidation (M))|F}E{M(Oxidation (M))|F}C{M(Oxidation (M))|F};[{I|L}T]TRE{M(Oxidation (M))|F}T{M(Oxidation (M))|F}C{M(Oxidation (M))|F};[{I|L}T]TRTE{M(Oxidation (M))|F}{M(Oxidation (M))|F}C{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}ET{I|L}T{M(Oxidation (M))|F}C{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]RET{I|L}T{M(Oxidation (M))|F}C{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F}EC{M(Oxidation (M))|F} 6.0824;5.6593;5.6461;5.5474;5.4666;5.4217;5.2632;5.1571;5.1306;5.1111 -;+;-;-;-;-;-;-;-;- + 27756 1 1.039 207250.6 1.0 10714 4927 15632 HBL1_DMSO_200M_050219_2,15643 HBL1_DMSO_200M_050219_2,15643,SYFEKETLTF True True SYFEKETLTF 82.255648 632.80919188261 27019136.0 15632.0 ENSG00000196705|ENST00000311048|ZNF431 9.374203046162924 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15644 82.258 105.0 830920.0 25 0 126690.0 22398 LPSVCPGMTPC 11 113 552.7462956561889 1103.4780383791776 2 552.7463867068291 MULTI CID FTMS 0 0 0 15632 398168.25 0.6729739057095897 -1 0.1595535278320312 12 Unmodified _LPSVCPGMTPC_ ENST00000461815.1_2_16:2600663-2607764:+|nuORF 13.042465956692816 0.7638483625850725 4 K{I|L}{M(Oxidation (M))|F}GDW 6 10 39.94 0.0 0.0 3.6195 0.0 0.0 339.0924244611344 0.0 339.0924244611344 0.0 22.37359215835733 0.0 0.0 0 1.7544321917401078 0.0 0.0 0.0 K{I|L}{M(Oxidation (M))|F}GDW 3.6195 - 351 1 1.039 72459.7 1.0 10715 4927 15632 HBL1_DMSO_200M_050219_2,15644 HBL1_DMSO_200M_050219_2,15644,LPSVCPGMTPC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15645 82.267 486.0 688810.0 25 0 67612.0 + 41694 VPSAVLIV 8 107 797.5131927039421 796.505916237342 1 797.5120727419853 MULTI CID FTMS 0 0 0 15632 364940.59375 0.2374714825155121 -2 0.2513885498046875 13 Unmodified _VPSAVLIV_ ENSG00000162191|ENST00000301935|UBXN1;ENST00000294119.6_1_11:62444064-62444232:-|nuORF 74.39630413441286 0.1057069479668299 4 [VP]ASV{I|L}{I|L}V 8 2 + 73.924 0.0 0.0 9.2811 9.2811 86.895 0.0 0.0 0.0 4.9434157707161575 12.258177263343413 4.9434157707161575 3.718553028398688 0 0.5189301784845296 1.3010299956639813 1.360924374808178 0.0 [VP]ASV{I|L}{I|L}V;[VP]SAV{I|L}{I|L}V;[PA]SVV{I|L}{I|L}V;[VP]AS{I|L}V{I|L}V;[VP]SA{I|L}V{I|L}V;[VP]AS{I|L}{I|L}VV;[PS]AVV{I|L}{I|L}V;[PA]SV{I|L}V{I|L}V;[PA]VSV{I|L}{I|L}V;[VP]ASV{I|L}V{I|L} 9.2811;8.8142;8.6604;8.639;8.1721;8.1323;8.0614;8.0183;7.8045;7.7421 -;+;-;-;-;-;-;-;-;- + 1395 1 1.039 227528.8 1.0 10716 4927 15632 HBL1_DMSO_200M_050219_2,15645 HBL1_DMSO_200M_050219_2,15645,VPSAVLIV True True VPSAVLIV 82.266525 797.512072741985 15173086.0 15632.0 ENSG00000162191|ENST00000301935|UBXN1;;ENST00000294119.6_1_11:62444064-62444232:-|nuORF 3.7799181938171382 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15646 82.269 123.0 462890.0 25 0 42264.0 + 43882 YFQALVNNM 9 104 550.2657691714362 1098.5169854096723 2 550.2654296755791 MULTI CID FTMS 0 0 0 15632 389511.6875 1.0 0 0.0 14 Unmodified _YFQALVNNM_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 50.855029805455786 0.0384952370514206 4 [{I|L}T]S[VP]{I|L}VS{I|L} 9 8 25.006 0.0 0.0 2.2763 0.0 0.0 0.0 185.9297101141474 185.9297101141474 3.693244518908873 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.4247425010840047 0.0 [{I|L}T]S[VP]{I|L}VS{I|L} 2.2763 - 306 1 1.039 52171.9 1.0 10717 4927 15632 HBL1_DMSO_200M_050219_2,15646 HBL1_DMSO_200M_050219_2,15646,YFQALVNNM True True YFQALVNNM 82.269084 550.265429675579 2815262.75 15632.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 6.626554330190023 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15647 82.278 533.0 432140.0 25 0 103350.0 -1 0 85 1126.8325223334275 3377.4757376004827 3 1127.505297839642 MULTI CID FTMS 0 0 0 15632 341433.15625 0.6364067132151541 -1 0.1595535278320312 15 4 VTE{M(Oxidation (M))|F}YGA[WH] 9 -1 46.648 0.0 0.0 1.3812 0.0 0.0 2268.972992424281 0.0 2268.972992424281 0.0 33.96254972203639 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.0 VTE{M(Oxidation (M))|F}YGA[WH] 1.3812 - 790 + 1 1.039 162125.7 1.0 10718 4927 15632 HBL1_DMSO_200M_050219_2,15647 HBL1_DMSO_200M_050219_2,15647, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15648 82.289 588.0 248120.0 25 0 17550.0 + 25660 NFYGDLRKAL 10 155 598.8257630128064 1195.6369730924127 2 599.3276855349541 MULTI CID FTMS 0 0 0 15632 242000.84375 1.0 0 0.0 16 Unmodified _NFYGDLRKAL_ ENSG00000164211|ENST00000296632|STARD4 50.13029200064056 0.0793861841501087 4 N{M(Oxidation (M))|F}YGD{I|L}RKA{I|L} 10 0 + 69.124 0.0 0.0 5.7813 5.7813 84.046 0.0 0.0 0.0 54.43102239436314 13.010299956639813 13.010299956639813 9.164539485499256 0 1.274227503252014 0.0 0.3054621874040891 0.3252574989159953 + + N{M(Oxidation (M))|F}YGD{I|L}RKA{I|L};N{M(Oxidation (M))|F}YGD{I|L}[VG]KA{I|L};N{M(Oxidation (M))|F}YGDVVAKA{I|L};N{M(Oxidation (M))|F}Y{[RE]|[WV]}RKA{I|L};N{M(Oxidation (M))|F}YRP{[MG]|[TS]}KA{I|L};N{M(Oxidation (M))|F}YR[DV]AKA{I|L};N{M(Oxidation (M))|F}Y{[RE]|[WV]}[VG]KA{I|L};N[HV]MD{I|L}RKA{I|L};N{M(Oxidation (M))|F}{I|L}{[ES]|[DT]|[{I|L}C]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KA{I|L};N{M(Oxidation (M))|F}{I|L}[R{M(Oxidation (M))|F}]{[MG]|[TS]}KA{I|L} 5.7813;5.0148;4.4685;4.1703;3.7712;3.7712;3.4001;3.0166;2.5166;2.4253 +;-;-;-;-;-;-;-;-;- + 1047 + 1 1.039 112322.6 1.0 10719 4927 15632 HBL1_DMSO_200M_050219_2,15648 HBL1_DMSO_200M_050219_2,15648,NFYGDLRKAL True True NFYGDLRKAL 82.28879 598.8267 2718752.5 15632.0 ENSG00000164211|ENST00000296632|STARD4 6.789755821228027 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15649 82.299 609.0 476810.0 25 0 43495.0 + 35122 SQYEEQFVTL 10 190 622.2955847244233 1242.5766165156465 2 622.2957641482353 MULTI CID FTMS 0 0 0 15632 214554.109375 0.1958787367912199 -2 0.2513885498046875 17 Unmodified _SQYEEQFVTL_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF 83.42873516780209 0.014257832770272 4 [YE]EQSQ{M(Oxidation (M))|F}V[{I|L}T] 10 4 + 81.955 0.0 0.0 6.5956 6.5956 79.154 0.0 0.0 0.0 2.714786011511777 4.884381005764311 2.714786011511777 2.714786011511777 0 0.5 0.958607314841775 1.7302046884880935 0.6421590589602533 [YE]EQSQ{M(Oxidation (M))|F}V[{I|L}T];{[QS]|[NT]}YEEQ{M(Oxidation (M))|F}V[{I|L}T];[AG]SYEEQ{M(Oxidation (M))|F}V[{I|L}T];[YE]QSEQ{M(Oxidation (M))|F}V[{I|L}T];[YE]EQ{M(Oxidation (M))|F}SQV[{I|L}T];[YE]EQS[AG]{M(Oxidation (M))|F}V[{I|L}T];[YE]QESQ{M(Oxidation (M))|F}V[{I|L}T];[YE]EQS{M(Oxidation (M))|F}QV[{I|L}T];[YE]E[AG]SQ{M(Oxidation (M))|F}V[{I|L}T];{[QS]|[NT]}YEE[AG]{M(Oxidation (M))|F}V[{I|L}T] 6.5956;6.3771;5.9907;5.9626;5.9453;5.858;5.8276;5.7692;5.6476;5.6395 -;+;-;-;-;-;-;-;-;- + 23130 1 1.039 208146.3 1.0 10720 4927 15632 HBL1_DMSO_200M_050219_2,15649 HBL1_DMSO_200M_050219_2,15649,SQYEEQFVTL True True SQYEEQFVTL 82.29944 622.295764148235 19971628.0 15632.0 ENST00000428210.5_1_2:61720980-61752425:-|nuORF;;ENSG00000082898|ENST00000401558|XPO1 7.368099053700765 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15650 82.313 800.0 341400.0 25 0 26152.0 + 10579 FVIRIRGINGV 11 175 415.2592106793409 1242.7558026382228 3 415.2589599490166 MULTI CID FTMS 0 0 0 15632 192816.84375 0.9039204726123028 -1 0.1595535278320312 18 Unmodified _FVIRIRGINGV_ ENSG00000147604|ENST00000352983|RPL7;ENST00000520308.1_1_5:165456004-165456130:-|nuORF 62.86856922530385 0.057503257068159 4 [{M(Oxidation (M))|F}V][R{I|L}][R{I|L}]G{I|L}NGV 11 0 + 35.174 0.0 0.0 2.8303 2.8303 79.304 0.0 0.0 0.0 4.0017088318535485 14.256246176256454 4.0017088318535485 35.173846523137954 0 1.1989700043360187 0.6575773191777937 0.0 0.9731975075880328 + + [{M(Oxidation (M))|F}V][R{I|L}][R{I|L}]G{I|L}NGV 2.8303 + + 198 1 1.039 211036.0 0.9800000190734864 10721 4927 15632 HBL1_DMSO_200M_050219_2,15650 HBL1_DMSO_200M_050219_2,15650,FVIRIRGINGV True True FVIRIRGINGV 82.313252 415.258959949017 2152508.75 15632.0 ENST00000520308.1_1_5:165456004-165456130:-|nuORF;;ENSG00000147604|ENST00000352983|RPL7 6.621041933695476 3.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15651 82.326 647.0 105610.0 25 0 15967.0 + 19273 LEKLQREKDKK 11 117 707.9214538420078 1413.8283547508156 2 707.9226562380791 MULTI CID FTMS 0 0 0 15632 167499.328125 1.0 0 0.0 19 Unmodified _LEKLQREKDKK_ REV__ENSG00000272514|ENST00000369562|CFAP206;REV__ENST00000296885.7_1_6:88117749-88144792:+|nuORF;REV__ENST00000489338.6_1_6:88125312-88173965:+|nuORF 2.735195868890462 0.8622431031272658 4 {[QN]|[E{I|L}]|[KN]}Y 3 -1 11.537 0.0 0.0 0.81599 0.0 0.0 0.0 1005.6142488760688 1005.6142488760688 1.6217955751958453 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 {[QN]|[E{I|L}]|[KN]}Y 0.81599 - 158 1 1.039 57256.2 1.0 10722 4927 15632 HBL1_DMSO_200M_050219_2,15651 HBL1_DMSO_200M_050219_2,15651,LEKLQREKDKK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15652 82.339 754.0 214450.0 25 0 30355.0 + 12691 GVLPNIQAV 9 156 455.771210605697 909.527868278194 2 455.7686340212822 MULTI CID FTMS 0 0 0 15632 196361.875 0.006211393077912 14 -1.4384307861328125 20 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 24.67388899826682 0.2172451872415813 4 [TP]A{I|L}PE 6 7 26.831 0.0 0.0 2.95 0.0 0.0 0.0 298.18439838977537 298.18439838977537 2.7540850485393484 0.0 0.0 0.0 0 0.0 1.154901959985743 1.1549471895720984 0.0 [TP]A{I|L}PE 2.95 - 1671 1 1.039 124442.4 1.0 10723 4927 15632 HBL1_DMSO_200M_050219_2,15652 HBL1_DMSO_200M_050219_2,15652,GVLPNIQAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15654 82.343 6.0 6593200.0 25 0 896540.0 18704 LAIWEASL 8 65 451.75274496202985 901.4909369908596 2 451.7528869509697 MULTI CID FTMS 0 0 0 15653 8580086.0 0.660645764752561 13 -1.3313751220703125 1 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 34.18733598223924 0.3315367612694167 4 [{I|L}A]VV[WD]S{I|L} 8 4 + 33.305 0.0 0.0 3.6945 3.6945 81.357 0.0 0.0 0.0 10.184013239538745 1.426222739823757 1.426222739823757 33.305388235033035 0 0.3807196863200844 2.0 0.3054621874040891 0.0 [{I|L}A]VV[WD]S{I|L} 3.6945 - 100 + 1 1.036 38259.7 1.0 10724 4928 15653 HBL1_DMSO_200M_050219_2,15654 HBL1_DMSO_200M_050219_2,15654,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15655 82.344 8.8 6794600.0 25 0 1084800.0 + 9918 FPFYGKPMRI 10 65 419.2266078236951 1254.6579940712852 3 419.2267944216728 MULTI CID FTMS 0 0 0 15653 4914916.5 1.0 0 0.0 2 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 32.78568957990786 0.2337485590374503 4 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 67.612 0.0 0.0 5.3889 0.0 0.0 119.0741444318375 0.0 119.0741444318375 0.0 45.39381281052492 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.3889 - 167 1 1.036 55052.3 1.0 10725 4928 15653 HBL1_DMSO_200M_050219_2,15655 HBL1_DMSO_200M_050219_2,15655,FPFYGKPMRI False True FPFYGKPMRI 82.344433 419.226794421673 784658992.0 15653.0 ENSG00000125870|ENST00000246071|SNRPB2 6.468101978302002 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15656 82.346 13.0 3664500.0 25 0 472890.0 + 4616 DAYTVLTRI 9 71 526.2925371206958 1050.5705213081917 2 526.2932617068291 MULTI CID FTMS 0 0 0 15653 2845705.0 0.1304772542098865 -3 0.3584442138671875 3 Unmodified _DAYTVLTRI_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 34.93206674587334 0.1032771302489716 4 {[DA]|[EG]}YTV{I|L}TR{I|L} 9 0 + 68.316 0.0 0.0 6.5028 6.5028 79.585 0.0 0.0 0.0 53.36750920626521 7.949624067838314 7.949624067838314 3.0102999566398125 0 0.8494850021680094 1.5228787452803376 0.7302046884880937 0.0 + + {[DA]|[EG]}YTV{I|L}TR{I|L};{[DA]|[EG]}Y{I|L}S{I|L}TR{I|L};[DV][{M(Oxidation (M))|F}T]S{I|L}TR{I|L} 6.5028;6.2162;2.3839 +;-;- + 92 + 1 1.036 44260.9 1.0 10726 4928 15653 HBL1_DMSO_200M_050219_2,15656 HBL1_DMSO_200M_050219_2,15656,DAYTVLTRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15657 82.347 24.0 2903600.0 25 0 199960.0 + 41234 VPFSVPKI 8 87 443.772467802316 885.5303826714321 2 443.7716247439384 MULTI CID FTMS 0 0 0 15653 1775087.0 0.9319145127152848 -1 0.1070556640625 4 Unmodified _VPFSVPKI_ ENSG00000068079|ENST00000415816|IFI35;ENST00000246911.6_1_17:41158964-41165399:+|nuORF;nc|ENSG00000068079|P80217-2|IFI35 52.268347100219714 0.1285778651304833 4 VP{M(Oxidation (M))|F}SVPK{I|L} 8 0 + 67.376 0.0 0.0 7.6085 7.6085 84.179 0.0 0.0 0.0 42.65353601780923 13.399480616943508 13.399480616943508 3.577957114533916 0 0.8494850021680094 1.3010299956639813 0.0 0.4247425010840047 + + VP{M(Oxidation (M))|F}SVPK{I|L};VP{M(Oxidation (M))|F}VSPK{I|L};V{I|L}MSVPK{I|L};V{I|L}MVSPK{I|L};VP[{M(Oxidation (M))|F}V]RR{I|L};VP[{M(Oxidation (M))|F}V][{I|L}A]K{I|L};VHHRPK{I|L} 7.6085;7.2045;5.9996;5.5956;4.1443;3.9894;3.4342 +;-;-;-;-;-;- + 326 + 1 1.036 59015.8 1.0 10727 4928 15653 HBL1_DMSO_200M_050219_2,15657 HBL1_DMSO_200M_050219_2,15657,VPFSVPKI True True VPFSVPKI 82.346789 443.771624743938 78444072.0 15653.0 ENSG00000068079|ENST00000415816|IFI35;;nc|ENSG00000068079|P80217-2|IFI35;;ENST00000246911.6_1_17:41158964-41165399:+|nuORF 4.933147112528483 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15658 82.348 33.0 1437700.0 25 0 163770.0 + 5296 DLCKMQETL 9 78 540.756285883708 1079.4980188342158 2 540.7567016482353 MULTI CID FTMS 0 0 0 15653 1479548.5 0.6347433476133392 -1 0.1070556640625 5 Unmodified _DLCKMQETL_ REV__ENSG00000171943|ENST00000367123|SRGAP2C;REV__ENSG00000196369|ENST00000641863|SRGAP2B;REV__ENSG00000266028|ENST00000573034|SRGAP2;REV__nc|ENSG00000196369|P0DMP2|SRGAP2B 12.531546534597751 0.4974689918368763 4 T{I|L} 2 -1 19.693 0.0 0.0 1.8242 0.0 0.0 847.3549504521831 0.0 847.3549504521831 0.0 3.1954393554186886 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 T{I|L} 1.8242 + + 92 + 1 1.036 44526.3 1.0 10728 4928 15653 HBL1_DMSO_200M_050219_2,15658 HBL1_DMSO_200M_050219_2,15658,DLCKMQETL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15659 82.35 107.0 790980.0 25 0 115750.0 6867 EEEEPENPYL 10 87 624.7669993871459 1247.5194458410915 2 624.7679321169853 MULTI CID FTMS 0 0 0 15653 774536.9375 0.511903798069035 -1 0.1070556640625 6 Unmodified _EEEEPENPYL_ ENSG00000176092|ENST00000308182|CRYBG2 10.073929032068715 0.6785112666868882 4 {[DA]|[EG]}DA{I|L} 5 8 23.984 0.0 0.0 1.9225 0.0 0.0 0.0 759.2850338251536 759.2850338251536 0.7468166796985969 0.0 0.0 0.0 0 0.0 0.6575773191777937 0.535666875892183 0.0 {[DA]|[EG]}DA{I|L} 1.9225 - 500 1 1.036 68819.3 1.0 10729 4928 15653 HBL1_DMSO_200M_050219_2,15659 HBL1_DMSO_200M_050219_2,15659,EEEEPENPYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15660 82.353 147.0 571360.0 25 0 82813.0 + 45727 YYFEGIKQTF 10 92 648.3180890647125 1294.6216251962248 2 648.3192626833916 MULTI CID FTMS 0 0 0 15653 539385.0 0.9251385940190844 -1 0.1070556640625 7 Unmodified _YYFEGIKQTF_ ENSG00000100591|ENST00000216479|AHSA1;ENST00000556369.1_3_14:77935388-77935589:+|nuORF 83.42873516780209 0.014257832770272 4 YY{M(Oxidation (M))|F}EG{I|L}KQT{M(Oxidation (M))|F} 10 0 + 90.105 0.0 0.0 6.96 6.96 88.41 0.0 0.0 0.0 56.09025586626458 13.521825181113629 13.521825181113629 9.164539485499247 0 1.1549471895720984 2.0 2.024227503252014 0.0 + + YY{M(Oxidation (M))|F}EG{I|L}KQT{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}EG{I|L}K[AG]T{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}W{I|L}KQT{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}W{I|L}K[AG]T{M(Oxidation (M))|F};YY{M(Oxidation (M))|F}{M(Oxidation (M))|F}[KQ]{[VA]|[{I|L}G]}{[ET]|[MV]};YY{M(Oxidation (M))|F}RRDQT{M(Oxidation (M))|F};YYRR{M(Oxidation (M))|F}DQT{M(Oxidation (M))|F};[{I|L}T][MT][KQ]YYT{M(Oxidation (M))|F};[{I|L}T][MT][KQ]T{M(Oxidation (M))|F}YY;[{M(Oxidation (M))|F}E]G{I|L}[KQ]YYT{M(Oxidation (M))|F} 6.96;6.2521;6.1854;5.4742;3.2594;2.6256;2.1262;1.8849;1.8583;1.8401 +;-;-;-;-;-;-;-;-;- + 488 + 1 1.036 63985.9 1.0 10730 4928 15653 HBL1_DMSO_200M_050219_2,15660 HBL1_DMSO_200M_050219_2,15660,YYFEGIKQTF True True YYFEGIKQTF 82.353202 648.319262683392 5261606.5 15653.0 ENST00000556369.1_3_14:77935388-77935589:+|nuORF;;ENSG00000100591|ENST00000216479|AHSA1 7.650459925333659 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15661 82.355 100.0 680240.0 25 0 86919.0 + + 38445 IIQQAFINV 9 117 523.3030805482477 1044.5916081632954 2 523.3066284060478 MULTI CID FTMS 0 0 0 15653 515669.09375 0.2594265503294152 18 -1.9254913330078125 8 Unmodified _TRVEKSLNV_ ENST00000474368.1_1_21:42773880-42775423:+|nuORF;ENST00000398632.3_1_21:42774955-42775423:+|nuORF;ENSG00000183486|ENST00000330714|MX2;ENST00000482953.5_1_21:42762449-42780157:+|nuORF 15.847184025352805 0.4077185912009129 4 QQA{I|L}{I|L}{M(Oxidation (M))|F}N 7 -1 31.901 0.0 0.0 3.054 0.0 0.0 0.0 227.11386093112665 227.11386093112665 4.729404269676813 0.0 0.0 0.0 0 0.0 0.0 0.0 1.2472131598060507 QQA{I|L}{I|L}{M(Oxidation (M))|F}N 3.054 - 1549 1 1.036 59952.3 1.0 10731 4928 15653 HBL1_DMSO_200M_050219_2,15661 HBL1_DMSO_200M_050219_2,15661,TRVEKSLNV False False IIQQAFINV 82.355362 523.306628406048 7115067.0 15653.0 ENST00000474368.1_1_21:42773880-42775423:+|nuORF;;ENST00000398632.3_1_21:42774955-42775423:+|nuORF;;ENSG00000183486|ENST00000330714|MX2;;ENST00000482953.5_1_21:42762449-42780157:+|nuORF 4.250661611557007 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15662 82.359 162.0 305590.0 25 0 17765.0 -1 0 77 881.9067130267736 1761.798873120347 2 882.4089843630791 MULTI CID FTMS 0 0 0 15653 488491.8125 0.2619554362629889 -2 0.2666091918945312 9 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQENA{M(Oxidation (M))|F}YE 13 -1 72.811 0.0 0.0 4.1328 0.0 0.0 0.0 226.15089883739705 226.15089883739705 55.06399080176389 0.0 0.0 0.0 0 0.3807196863200844 1.3010299956639813 0.3807196863200844 0.7742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQENA{M(Oxidation (M))|F}YE 4.1328 - 1571 1 1.036 39642.5 1.0 10732 4928 15653 HBL1_DMSO_200M_050219_2,15662 HBL1_DMSO_200M_050219_2,15662, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15663 82.361 87.0 658520.0 25 0 57805.0 + 10507 FVCDIRPEI 9 98 546.2835025216945 1090.5524521101888 2 546.2831298708916 MULTI CID FTMS 0 0 0 15653 465536.09375 0.3139121368712635 -4 0.4636459350585937 10 Unmodified _FVCDIRPEI_ ENSG00000136888|ENST00000374050|ATP6V1G1 26.268140514670165 0.1969607489560049 4 [{I|L}P]{M(Oxidation (M))|F}R{I|L}[DC]VE 9 8 + 26.844 0.0 0.0 2.4615 2.4615 72.661 0.0 0.0 0.0 1.7949322431153265 12.24024483683931 1.7949322431153265 8.828413713173006 0 0.6677353201839438 1.0457574905606752 0.0 0.0 [{I|L}P]{M(Oxidation (M))|F}R{I|L}[DC]VE;{[QN]|[E{I|L}]|[KN]}P{[ET]|[MV]}{M(Oxidation (M))|F}QVE;[{M(Oxidation (M))|F}V][W{I|L}][NG]QVE;{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}][NG]QVE;{[QN]|[E{I|L}]|[KN]}P{[ET]|[MV]}{M(Oxidation (M))|F}[AG]VE 2.4615;1.652;0.97023;0.9222;0.80764 -;-;-;-;- 292 1 1.036 52927.6 1.0 10733 4928 15653 HBL1_DMSO_200M_050219_2,15663 HBL1_DMSO_200M_050219_2,15663,FVCDIRPEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15664 82.37 509.0 422550.0 25 0 54423.0 + 42900 VVPPFLQPE 9 180 513.2876677572596 1024.560782581319 2 513.2879516482353 MULTI CID FTMS 0 0 0 15653 379509.5625 1.0 0 0.0 11 Unmodified _VVPPFLQPE_ CON__P02666 37.97399986684836 0.0865783450051559 4 VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}QPE 9 2 + 53.266 0.0 0.0 5.1989 5.1989 77.792 0.0 0.0 0.0 5.350359045003046 5.607142825852179 5.350359045003046 5.350359045003046 0 1.2034021960761263 2.0 0.9802046884880936 0.6747425010840047 VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}QPE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}QVPD{I|L};VVQQQVVPE;VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}QEP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}QVVPE;VVQQQVPD{I|L};VV{[WT]|[RM]}PVVPE;VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}[HS]V;[{M(Oxidation (M))|F}V]PVP{I|L}QPE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VVQ{I|L}[HS]V 5.1989;4.6767;4.6517;4.6509;4.5856;4.3712;4.3622;4.3566;4.2646;4.1617 -;-;-;-;-;-;-;-;-;- 3606 + 1 1.036 170674.1 1.0 10734 4928 15653 HBL1_DMSO_200M_050219_2,15664 HBL1_DMSO_200M_050219_2,15664,VVPPFLQPE True True False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 15665 82.379 523.0 645760.0 25 0 47032.0 + 30914 RIVDKLLAL 9 188 520.8447920032288 1039.6750310732575 2 520.8455078005791 MULTI CID FTMS 0 0 0 15653 332900.21875 0.2266494498188644 -2 0.2666091918945312 12 Unmodified _RIVDKLLAL_ ENSG00000111602|ENST00000553532|TIMELESS;ENST00000557589.1_1_12:56815125-56815341:-|nuORF;nc|ENSG00000111602|Q9UNS1-2|TIMELESS 36.506200033944 0.094635877243972 4 {I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}{I|L}A{I|L} 9 3 + 54.309 0.0 0.0 5.2237 5.2237 68.976 0.0 0.0 0.0 0.2287874528033739 14.09256854528806 0.2287874528033739 0.2287874528033739 0 1.4749073637206092 1.3010299956639813 0.5 0.0 {I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}{I|L}A{I|L};[{I|L}A][W{I|L}]K{I|L}{I|L}A{I|L};{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}A{I|L}{I|L};[{I|L}A][W{I|L}]K{I|L}A{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]K{I|L}{I|L}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]K{I|L}A{I|L}{I|L};[{I|L}A][W{I|L}]KA{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]K{I|L}{I|L}A{I|L};{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KA{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]K{I|L}A{I|L}{I|L} 5.2237;5.2017;4.844;4.822;4.725;4.3453;4.2387;4.0265;3.7798;3.6468 -;-;-;-;-;-;-;-;-;- 1556 1 1.036 253243.8 1.0 10735 4928 15653 HBL1_DMSO_200M_050219_2,15665 HBL1_DMSO_200M_050219_2,15665,RIVDKLLAL True True RIVDKLLAL 82.378752 520.845507800579 12695151.0 15653.0 nc|ENSG00000111602|Q9UNS1-2|TIMELESS;;ENST00000557589.1_1_12:56815125-56815341:-|nuORF;;ENSG00000111602|ENST00000553532|TIMELESS 2.9109291235605874 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15666 82.38 74.0 740120.0 25 0 63595.0 + -1 ALLEMDARL 9 88 516.2823498918985 515.2750734252985 1 516.2822143435478 MULTI CID FTMS 0 0 0 15653 261622.421875 1.0 0 0.0 13 ENSG00000178896|ENST00000316052|EXOSC4 4 [{I|L}A]{I|L}{[CP]|[EA]} 5 -1 + 30.458 0.0 0.0 5.9109 5.9109 88.359 0.0 0.0 0.0 16.232492903979004 6.020599913279625 6.020599913279625 16.232492903979004 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A]{I|L}{[CP]|[EA]};VVV{[CP]|[EA]};[{I|L}T][WP] 5.9109;2.7607;0.86109 -;-;- 52 1 1.036 46922.3 1.0 10736 4928 15653 HBL1_DMSO_200M_050219_2,15666 HBL1_DMSO_200M_050219_2,15666, False False ALLEMDARL 82.380475 516.282214343548 2726369.0 15653.0 ENSG00000178896|ENST00000316052|EXOSC4 4.463760852813721 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15667 82.39 567.0 288500.0 25 0 41668.0 + 16302 IWPNARISVM 10 138 593.8224900911056 1185.630427249011 2 593.8232299685478 MULTI CID FTMS 0 0 0 15653 251403.921875 0.4898438208780737 -5 0.5806961059570312 14 Unmodified _IWPNARISVM_ ENSG00000131844|ENST00000340941|MCCC2;nc|ENSG00000131844|Q9HCC0-2|MCCC2 36.506200033944 0.1944608063770638 4 {I|L}WPNA 5 5 60.433 0.0 0.0 5.0971 0.0 0.0 0.0 601.3167208307249 601.3167208307249 44.447055689656665 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + {I|L}WPNA 5.0971 + + 747 + 1 1.036 121489.3 1.0 10737 4928 15653 HBL1_DMSO_200M_050219_2,15667 HBL1_DMSO_200M_050219_2,15667,IWPNARISVM False True IWPNARISVM 82.390418 593.823229968548 20850244.5 15653.0 nc|ENSG00000131844|Q9HCC0-2|MCCC2;;ENSG00000131844|ENST00000340941|MCCC2 6.157649834950765 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15668 82.403 702.0 239640.0 25 0 23164.0 + -1 FPFYGKPMRI 10 117 424.5583924761551 1270.6533480286653 3 424.5582153201103 MULTI CID FTMS 0 0 0 15653 248709.0 1.0 0 0.0 15 Oxidation (M) _FPFYGKPM(Oxidation (M))RI_ ENSG00000125870|ENST00000246071|SNRPB2 14.218169984304629 0.6089749286722269 4 KGY{M(Oxidation (M))|F}PE 6 -1 43.193 0.0 0.0 3.3992 0.0 0.0 531.2848126105935 0.0 531.2848126105935 0.0 15.233871898888154 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 KGY{M(Oxidation (M))|F}PE 3.3992 - 143 1 1.036 136383.8 1.0 10738 4928 15653 HBL1_DMSO_200M_050219_2,15668 HBL1_DMSO_200M_050219_2,15668,FPFYGKPMRI False False FPFYGKPMRI 82.4026 424.55821532011 44347802.0 15653.0 ENSG00000125870|ENST00000246071|SNRPB2 6.297185103098552 3.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15669 82.414 604.0 396810.0 25 0 44931.0 + 19079 FPLQQKILV 9 207 542.8396147632048 1083.6646765932096 2 543.3399536013603 MULTI CID FTMS 0 0 0 15653 222429.921875 0.0799682262088107 7 -0.8441238403320312 16 Unmodified _LDRLLKDIV_ ENSG00000094804|ENST00000209728|CDC6 26.88365393820708 0.1891292719743517 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}R{I|L}P{M(Oxidation (M))|F}{I|L} 8 5 40.401 0.0 0.0 3.7282 0.0 0.0 0.0 113.05450341475073 113.05450341475073 17.881296788645063 0.0 0.0 0.0 0 0.0 1.154901959985743 0.9049471895720984 0.5952788787511375 {NN|[MP]|[D{I|L}]|[EV]}{I|L}R{I|L}P{M(Oxidation (M))|F}{I|L} 3.7282 - 10447 1 1.036 187183.5 1.0 10739 4928 15653 HBL1_DMSO_200M_050219_2,15669 HBL1_DMSO_200M_050219_2,15669,LDRLLKDIV False False FPLQQKILV 82.414333 543.33995360136 15260372.0 15653.0 ENSG00000094804|ENST00000209728|CDC6 5.309309005737305 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15670 82.419 262.0 233820.0 25 0 67306.0 + 27354 PHTMDMSIIL 10 97 386.5281628549495 1156.562659165049 3 386.5280029177666 MULTI CID FTMS 0 0 0 15653 173848.640625 0.5235549823141646 -3 0.3584442138671875 17 Unmodified _PHTMDMSIIL_ ENSG00000145386|ENST00000274026|CCNA2 28.486842064014134 0.328649637529545 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}TP[WM]{I|L} 9 7 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y + + 19.162 4.7269 1.1901 1.6568 1.6568 44.392 0.0 0.0 0.0 0.0 3.2196472317624405 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}TP[WM]{I|L} 1.6568 - 319 + 1 1.036 53588.9 1.0 10740 4928 15653 HBL1_DMSO_200M_050219_2,15670 HBL1_DMSO_200M_050219_2,15670,PHTMDMSIIL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15671 82.432 733.0 85816.0 25 0 6989.5 -1 0 113 690.9722976929846 2069.8950636791537 3 691.3065063357353 MULTI CID FTMS 0 0 0 15653 163599.578125 0.2246153572222312 2 -0.2536697387695312 18 4 [{I|L}V]N 3 -1 19.621 0.0 0.0 0.94792 0.0 0.0 0.0 1740.6783390917178 1740.6783390917178 2.621119296336122 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]N 0.94792 - 321 1 1.036 59856.8 1.0 10741 4928 15653 HBL1_DMSO_200M_050219_2,15671 HBL1_DMSO_200M_050219_2,15671, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15672 82.446 800.0 263340.0 25 0 68223.0 + -1 YPAGFMDVI 9 105 1028.474172256541 1027.4668957899407 1 1029.476000964642 MULTI CID FTMS 0 0 0 15653 144142.703125 0.9788956327665228 -4 0.4636459350585937 19 Oxidation (M) _YPAGFM(Oxidation (M))DVI_ ENST00000406274.1_1_6:13521672-13522002:+|nuORF;ENSG00000129824|ENST00000250784|RPS4Y1;ENSG00000198034|ENST00000316084|RPS4X;ENST00000486733.2_1_X:71494866-71496063:-|nuORF;ENST00000373626.4_1_X:71494279-71497060:-|nuORF 16.942295170755138 0.3780752226737986 4 [MN][YK]{M(Oxidation (M))|F}DVG 8 -1 34.174 0.0 0.0 3.326 0.0 0.0 0.0 70.04099009896314 70.04099009896314 3.869025540371229 0.0 0.0 0.0 0 0.0 2.0 0.5752574989159953 0.3807196863200844 [MN][YK]{M(Oxidation (M))|F}DVG 3.326 - 1416 1 1.036 137276.5 0.9900000095367432 10742 4928 15653 HBL1_DMSO_200M_050219_2,15672 HBL1_DMSO_200M_050219_2,15672,YPAGFMDVI False False YPAGFMDVI 82.44576 1029.47600096464 4768225.5 15653.0 ENST00000406274.1_1_6:13521672-13522002:+|nuORF;;ENSG00000129824|ENST00000250784|RPS4Y1;;ENSG00000198034|ENST00000316084|RPS4X;;ENST00000486733.2_1_X:71494866-71496063:-|nuORF;;ENST00000373626.4_1_X:71494279-71497060:-|nuORF 4.604434569676717 1.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15673 82.461 800.0 121570.0 25 0 15055.0 + 25661 NFYGDLRKAL 10 144 399.55242358993206 1195.6354413699962 3 399.5524780154228 MULTI CID FTMS 0 0 0 15653 137376.65625 1.0 0 0.0 20 Unmodified _NFYGDLRKAL_ ENSG00000164211|ENST00000296632|STARD4 4.715918219556657 0.704822610516493 4 {I|L}[DG]Y{[QD]|[EN]|[WG]|[KD]|[RS]} 6 7 12.676 0.0 0.0 1.0602 0.0 0.0 486.3285834639093 0.0 486.3285834639093 0.0 2.080130363174268 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}[DG]Y{[QD]|[EN]|[WG]|[KD]|[RS]} 1.0602 - 58 1 1.036 80215.7 0.8600000143051147 10743 4928 15653 HBL1_DMSO_200M_050219_2,15673 HBL1_DMSO_200M_050219_2,15673,NFYGDLRKAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15675 82.465 12.0 4088000.0 25 0 445860.0 + 12714 GVLSSDGVWRV 11 63 587.8143947223818 1173.6142365115636 2 587.8147460818291 MULTI CID FTMS 0 0 0 15674 4471369.0 0.8801793992616828 1 -0.131927490234375 1 Unmodified _GVLSSDGVWRV_ ENSG00000125459|ENST00000245564|MSTO1;ENST00000483734.5_1_1:155580745-155584061:+|nuORF;nc|ENSG00000125459|Q9BUK6-2|MSTO1;nc|ENSG00000125459|Q9BUK6-3|MSTO1 42.312485326615175 0.1767732348921932 4 [VG]{I|L}SSDGVW[RV] 11 0 + 82.695 0.0 0.0 7.0462 7.0462 93.907 0.0 0.0 0.0 72.23761092642252 4.981979378655865 4.981979378655865 27.316085869055115 0 1.424742501084005 1.6989700043360187 0.4247425010840047 0.0 + + [VG]{I|L}SSDGVW[RV];[VG]{I|L}{[C(Carbamidomethyl (C))E]|[WC]}GVW[RV];[VG]{I|L}[WC(Carbamidomethyl (C))]VW[RV];R{I|L}{[C(Carbamidomethyl (C))E]|[WC]}RW[RV];[VG]{I|L}V[WC(Carbamidomethyl (C))]W[RV];[VG]{[WT]|[RM]}DRW[RV];R{[WT]|[RM]}DGVW[RV] 7.0462;4.7187;3.8002;3.7602;3.6501;3.6307;3.2677 +;-;-;-;-;-;- + 155 + 1 1.036 42167.6 1.0 10744 4929 15674 HBL1_DMSO_200M_050219_2,15675 HBL1_DMSO_200M_050219_2,15675,GVLSSDGVWRV False True GVLSSDGVWRV 82.464993 587.814746081829 135343104.0 15674.0 ENSG00000125459|ENST00000245564|MSTO1;;nc|ENSG00000125459|Q9BUK6-3|MSTO1;;nc|ENSG00000125459|Q9BUK6-2|MSTO1;;ENST00000483734.5_1_1:155580745-155584061:+|nuORF 10.25192387898763 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15676 82.466 30.0 1601600.0 25 0 171120.0 + 15886 ISRYIELLL 9 85 560.3398734593414 1118.6651939854828 2 560.3399536013603 MULTI CID FTMS 0 0 0 15674 751404.0625 0.3491013383810432 2 -0.1935043334960937 2 Unmodified _ISRYIELLL_ REV__ENSG00000149311|ENST00000675843|ATM;REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF 8.593279151180031 0.6146971463335029 4 TDE 3 -1 14.922 0.0 0.0 1.3339 0.0 0.0 245.2266086356765 525.3182467096311 770.5448553453077 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TDE 1.3339 - 36 + 1 1.036 44425.6 1.0 10745 4929 15674 HBL1_DMSO_200M_050219_2,15676 HBL1_DMSO_200M_050219_2,15676,ISRYIELLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15677 82.467 35.0 1637900.0 25 0 232720.0 + 1708 ALPLSEGTH 9 72 462.7437540417929 923.4729551503858 2 462.7438537478447 MULTI CID FTMS 0 0 0 15674 1274574.875 0.483191414065977 15 -1.567108154296875 3 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 11.640296217721598 0.521594087909532 4 [{I|L}A]PP 4 -1 36.995 0.0 0.0 4.006 0.0 0.0 0.0 542.2238253229124 542.2238253229124 25.73572462447597 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}A]PP 4.006 - 38 + 1 1.036 49296.1 1.0 10746 4929 15674 HBL1_DMSO_200M_050219_2,15677 HBL1_DMSO_200M_050219_2,15677,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15678 82.47 120.0 739410.0 25 0 136860.0 -1 IASVCYLD 8 69 470.7263908802107 939.4382288272216 2 470.7264892458916 MULTI CID FTMS 0 0 0 15674 640707.8125 0.2014004381749922 -12 1.33941650390625 4 Carbamidomethyl (C) _IASVC(Carbamidomethyl (C))YLD_ ENST00000373479.8_1_6:37321761-37321914:+|nuORF 19.438996006549623 0.6237395211498085 4 {I|L}A 2 -1 42.959 0.0 0.0 4.5728 0.0 0.0 0.0 752.2953158150347 752.2953158150347 35.7234182151732 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}A 4.5728 + + 33 + 1 1.036 74881.8 1.0 10747 4929 15674 HBL1_DMSO_200M_050219_2,15678 HBL1_DMSO_200M_050219_2,15678,IASVCYLD False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15679 82.473 133.0 680610.0 25 0 81380.0 15969 ITCLCSMLP 9 106 490.7325581338665 979.4505633345332 2 490.7330810427666 MULTI CID FTMS 0 0 0 15674 444389.65625 0.6010189005334691 1 -0.131927490234375 5 Unmodified _ITCLCSMLP_ ENSG00000117000|ENST00000372771|RLF 16.942295170755138 0.3780752226737986 4 [{I|L}T]C{I|L}V 5 5 36.911 0.0 0.0 3.7686 0.0 0.0 0.0 447.136769255219 447.136769255219 15.30726239543597 0.0 0.0 0.0 0 0.5 2.0 0.3494850021680094 0.0 [{I|L}T]C{I|L}V 3.7686 - 358 1 1.036 75532.6 1.0 10748 4929 15674 HBL1_DMSO_200M_050219_2,15679 HBL1_DMSO_200M_050219_2,15679,ITCLCSMLP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15680 82.477 227.0 598870.0 25 0 95752.0 1619 ALLTFDTGC 9 109 314.15345579277783 939.4385379785336 3 314.1530944705009 MULTI CID FTMS 0 0 0 15674 371745.21875 0.1884853939053155 21 -2.27777099609375 6 Unmodified _ALLTFDTGC_ ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF 23.1484247019978 0.2366544122328345 4 A{I|L}{I|L} 3 6 49.253 0.0 0.0 5.2428 0.0 0.0 0.0 639.2110622122445 639.2110622122445 38.79493455131808 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 + A{I|L}{I|L} 5.2428 + + 37 + 1 1.036 111407.2 1.0 10749 4929 15674 HBL1_DMSO_200M_050219_2,15680 HBL1_DMSO_200M_050219_2,15680,ALLTFDTGC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15681 82.481 212.0 511370.0 25 0 85747.0 + 18591 LADLIQKL 8 107 457.2893073128319 912.5640616924636 2 457.2896301150322 MULTI CID FTMS 0 0 0 15674 335080.90625 0.4606203281093042 -2 0.2287979125976562 7 Unmodified _LADLIQKL_ REV__CON__A2VCT4 48.345845343767074 0.1470278396477103 4 [{I|L}A]D{I|L}{I|L}QK{I|L} 8 -1 + 77.484 0.0 0.0 8.4908 8.4908 79.576 0.0 0.0 0.0 46.26236164447964 12.914930551903224 12.914930551903224 0.3959062302381255 0 1.1237125054200234 2.0 0.0 0.6861818737241735 [{I|L}A]D{I|L}{I|L}QK{I|L};[{I|L}A]{I|L}D{I|L}QK{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}QK{I|L};[{I|L}A]D{I|L}{I|L}[AG]K{I|L};[{I|L}A]{I|L}D{I|L}[AG]K{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}[AG]K{I|L};[{I|L}A]D{I|L}{I|L}[KG]A{I|L};[{I|L}A]{I|L}D{I|L}[KG]A{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}[KG]A{I|L};W{I|L}R[RV]A{I|L} 8.4908;8.4475;7.7206;7.4759;7.4325;6.7056;5.9335;5.8901;5.1632;2.5553 +;-;-;-;-;-;-;-;-;- + 464 + 1 1.036 90019.5 1.0 10750 4929 15674 HBL1_DMSO_200M_050219_2,15681 HBL1_DMSO_200M_050219_2,15681,LADLIQKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15682 82.483 108.0 421090.0 25 0 35648.0 + -1 AMKRGGSG 8 64 779.3832013813704 778.3759249147704 1 779.3875610232353 MULTI CID FTMS 0 0 0 15674 345626.0625 0.9689773990658946 -1 0.1217422485351562 8 Oxidation (M) _AM(Oxidation (M))KRGGSG_ REV__ENSG00000058056|ENST00000263966|USP13 7.910154910731844 0.7763180056447161 4 {[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}E{I|L} 6 -1 + 62.923 0.0 0.0 8.0839 8.0839 84.923 0.0 0.0 0.0 3.4809660759073893 16.197887582883936 3.4809660759073893 3.4809660759073893 0 0.3054621874040891 1.0457574905606752 1.0994850021680094 0.0 {[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}E{I|L};EE{I|L}{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}EE{I|L};[{M(Oxidation (M))|F}E]{I|L}EE{I|L};EE{M(Oxidation (M))|F}{I|L}E{I|L};[{M(Oxidation (M))|F}E]KNE{I|L};[{M(Oxidation (M))|F}E]E{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EEE{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[NG]S{I|L};[{M(Oxidation (M))|F}E]KGGE{I|L} 8.0839;7.6367;7.5677;6.5911;6.0896;6.0128;5.5603;5.0639;5.0326;4.8025 -;-;-;-;-;-;-;-;-;- 651 1 1.036 38076.6 1.0 10751 4929 15674 HBL1_DMSO_200M_050219_2,15682 HBL1_DMSO_200M_050219_2,15682,AMKRGGSG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15683 82.494 623.0 222700.0 25 0 39250.0 + 38420 TRKRRPTRTEP 11 148 699.4083671219623 1396.8021813107246 2 699.4084960818291 MULTI CID FTMS 0 0 0 15674 275829.46875 0.5079627733268387 1 -0.131927490234375 9 Unmodified _TRKRRPTRTEP_ REV__ENST00000249373.7_1_7:128829191-128843254:+|nuORF 4.897010918128616 0.8520435188433833 4 {I|L}SPP{[WT]|[RM]} 6 -1 19.882 0.0 0.0 1.4234 0.0 0.0 697.4423923476371 0.0 697.4423923476371 0.0 10.4178851384269 0.0 0.0 0 0.0 0.0 0.9916440611282626 0.0 {I|L}SPP{[WT]|[RM]} 1.4234 - 839 + 1 1.036 111800.1 1.0 10752 4929 15674 HBL1_DMSO_200M_050219_2,15683 HBL1_DMSO_200M_050219_2,15683,TRKRRPTRTEP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15684 82.498 188.0 425300.0 25 0 47323.0 + 28373 PSLKAPVKPLS 11 112 568.8531210164417 1135.6916890996831 2 568.8533203005791 MULTI CID FTMS 0 0 0 15674 280267.40625 0.3845791701049946 2 -0.1935043334960937 10 Unmodified _PSLKAPVKPLS_ REV__ENSG00000126883|ENST00000359428|NUP214;REV__ENST00000489260.1_1_9:134038513-134039545:+|nuORF;REV__ENST00000525980.5_1_9:134025776-134070755:+|nuORF;REV__nc|ENSG00000126883|P35658-2|NUP214;REV__nc|ENSG00000126883|P35658-3|NUP214;REV__nc|ENSG00000126883|P35658-4|NUP214;REV__nc|ENSG00000126883|P35658-5|NUP214 5.296884461304476 0.8501568894076437 4 VKVE{M(Oxidation (M))|F}S{I|L} 7 -1 23.095 0.0 0.0 2.0335 0.0 0.0 315.23790599597083 0.0 315.23790599597083 0.0 11.39989552181803 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 VKVE{M(Oxidation (M))|F}S{I|L} 2.0335 - 362 + 1 1.036 68383.5 1.0 10753 4929 15674 HBL1_DMSO_200M_050219_2,15684 HBL1_DMSO_200M_050219_2,15684,PSLKAPVKPLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15685 82.508 613.0 267920.0 25 0 19031.0 + 13184 HGFAGYFETV 10 156 564.2611528172888 1126.5077527013775 2 564.2616454958916 MULTI CID FTMS 0 0 0 15674 256739.6875 0.2168561770859124 2 -0.1935043334960937 11 Unmodified _HGFAGYFETV_ ENSG00000100462|ENST00000324366|PRMT5;ENST00000557758.1_1_14:23391634-23392032:-|nuORF;nc|ENSG00000100462|O14744-2|PRMT5;nc|ENSG00000100462|O14744-3|PRMT5;nc|ENSG00000100462|O14744-4|PRMT5;nc|ENSG00000100462|O14744-5|PRMT5 53.57557251787612 0.059165173252085 4 [{M(Oxidation (M))|F}V]T{M(Oxidation (M))|F}YGH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 7 + 62.611 0.0 0.0 5.558 5.558 81.105 0.0 0.0 0.0 32.548475588838315 2.7545373444029053 2.7545373444029053 7.04119982655925 0 0.0 2.0 0.6747425010840047 0.0 [{M(Oxidation (M))|F}V]T{M(Oxidation (M))|F}YGH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{M(Oxidation (M))|F}V]T{M(Oxidation (M))|F}H{[DS]|[MA]|[CV]|TT}Q{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}E{M(Oxidation (M))|F}YGH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{M(Oxidation (M))|F}V]T{M(Oxidation (M))|F}HGY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[AG]{M(Oxidation (M))|F}HGY{M(Oxidation (M))|F}E{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}[PS]GY{M(Oxidation (M))|F}E{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}V]T{M(Oxidation (M))|F}NDQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{M(Oxidation (M))|F}V]T{M(Oxidation (M))|F}NNE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[MS]|[{M(Oxidation (M))|F}A]}E{M(Oxidation (M))|F}H{[DS]|[MA]|[CV]|TT}Q{M(Oxidation (M))|F};[AG]{M(Oxidation (M))|F}HGYE{M(Oxidation (M))|F}{[TV]|[{I|L}S]} 5.558;4.9329;4.8039;4.7563;4.6777;4.521;4.3588;4.3436;4.1788;4.1433 -;-;-;-;-;-;-;-;-;- 3300 + 1 1.036 129818.2 1.0 10754 4929 15674 HBL1_DMSO_200M_050219_2,15685 HBL1_DMSO_200M_050219_2,15685,HGFAGYFETV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15686 82.52 645.0 588300.0 25 0 150490.0 + 36118 SVSPLFNGV 9 124 919.4859685760258 918.4786921094258 1 920.4890624880792 MULTI CID FTMS 0 0 0 15674 244661.1875 0.4542215001341345 -1 0.1217422485351562 12 Unmodified _SVSPLFNGV_ ENSG00000241973|ENST00000255882|PI4KA;ENST00000485963.5_1_22:21152870-21213097:-|nuORF 34.40172386719151 0.1061884637610825 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}N{M(Oxidation (M))|F}NG 7 5 28.694 0.0 0.0 3.1241 0.0 0.0 0.0 113.07778813897576 113.07778813897576 -2.2136512467205627 0.0 -2.2136512467205627 0.0 0 0.0 0.0 1.142642683904553 0.7302046884880937 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}N{M(Oxidation (M))|F}NG 3.1241 - 4393 1 1.036 250347.7 1.0 10755 4929 15674 HBL1_DMSO_200M_050219_2,15686 HBL1_DMSO_200M_050219_2,15686,SVSPLFNGV True True SVSPLFNGV 82.519611 920.489062488079 6155593.5 15674.0 ENSG00000241973|ENST00000255882|PI4KA;;ENST00000485963.5_1_22:21152870-21213097:-|nuORF 3.224000414212545 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15687 82.527 395.0 334780.0 25 0 30175.0 + 18868 LASQHEEL 8 163 309.49051870186247 925.4497267057876 3 309.4899474978447 MULTI CID FTMS 0 0 0 15674 231824.609375 0.6016862800632767 18 -1.8902587890625 13 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 4 {I|L}{M(Oxidation (M))|F} 2 -1 15.573 0.0 0.0 1.6828 0.0 0.0 647.3017956277089 0.0 647.3017956277089 0.0 1.593793813122062 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.6828 - 67 1 1.036 109122.3 1.0 10756 4929 15674 HBL1_DMSO_200M_050219_2,15687 HBL1_DMSO_200M_050219_2,15687,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15688 82.53 177.0 469330.0 25 0 94568.0 + -1 YSRMEPTPV 9 118 548.2609109038389 1094.5072688744776 2 548.2619506716728 MULTI CID FTMS 0 0 0 15674 221334.234375 0.7995720417949296 1 -0.131927490234375 14 Oxidation (M) _YSRM(Oxidation (M))EPTPV_ REV__ENSG00000170379|ENST00000684770|TCAF2;REV__ENSG00000283528|ENST00000636941|TCAF2C;REV__nc|ENSG00000170379|A6NFQ2-2|TCAF2;REV__nc|ENSG00000170379|A6NFQ2-3|TCAF2 11.640296217721598 0.521594087909532 4 {[QN]|[E{I|L}]|[KN]}VS{M(Oxidation (M))|F}VK[C(Carbamidomethyl (C))N] 9 -1 + 41.634 0.0 0.0 3.8039 3.8039 70.506 0.0 0.0 0.0 17.256721267158884 3.832946754800368 3.832946754800368 3.832946754800368 0 0.0 1.154901959985743 0.0 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}VS{M(Oxidation (M))|F}VK[C(Carbamidomethyl (C))N];{[QN]|[E{I|L}]|[KN]}VS{I|L}{M(Oxidation (M))|F}{I|L}Q{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}VYAVK[C(Carbamidomethyl (C))N];{[QN]|[E{I|L}]|[KN]}VYG{I|L}K[C(Carbamidomethyl (C))N];{[QN]|[E{I|L}]|[KN]}VYVAK[C(Carbamidomethyl (C))N];{[QN]|[E{I|L}]|[KN]}VS{M(Oxidation (M))|F}[EP]Q{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}VY[PS]{I|L}Q{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PS{M(Oxidation (M))|F}VK[C(Carbamidomethyl (C))N];{[QN]|[E{I|L}]|[KN]}VYVVV[C(Carbamidomethyl (C))D];{[QN]|[E{I|L}]|[KN]}VYA[EP]Q{M(Oxidation (M))|F} 3.8039;3.4537;3.3068;3.0318;3.0318;2.5657;2.3436;2.2273;2.1438;2.0686 -;-;-;-;-;-;-;-;-;- 519 1 1.036 70108.2 1.0 10757 4929 15674 HBL1_DMSO_200M_050219_2,15688 HBL1_DMSO_200M_050219_2,15688,YSRMEPTPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15689 82.534 119.0 660050.0 25 0 49295.0 -1 ALLKMRRQ 8 117 516.3125422282473 1030.6105315232944 2 516.8134643435478 MULTI CID FTMS 0 0 0 15674 205987.640625 0.8091822778939424 -2 0.2287979125976562 15 Oxidation (M) _ALLKM(Oxidation (M))RRQ_ ENSG00000113790|ENST00000231887|EHHADH;nc|ENSG00000113790|Q08426-2|EHHADH 18.13498045792455 0.6430038125133779 4 VVVY[DV]PK{I|L} 9 -1 + 39.637 0.0 0.0 3.8459 3.8459 72.857 0.0 0.0 0.0 20.6403993171594 6.3482000930547215 6.3482000930547215 5.6246936830415 0 0.2742275032520141 1.3979400086720375 0.2614393726401688 0.0 VVVY[DV]PK{I|L};VVVV{[YD]|[{M(Oxidation (M))|F}M]}PK{I|L};[{I|L}A]{I|L}Y[DV]PK{I|L};VVVK[WC(Carbamidomethyl (C))]K{I|L};[{I|L}A]Y{I|L}[DV]PK{I|L};VVVYT[RV]PV;VV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}CPK{I|L};VVVYS[R{I|L}]PV;[{I|L}A]{I|L}V{[YD]|[{M(Oxidation (M))|F}M]}PK{I|L};[{I|L}A]{I|L}K[WC(Carbamidomethyl (C))]K{I|L} 3.8459;3.3002;3.052;2.8697;2.8367;2.793;2.716;2.5949;2.5062;2.0757 -;-;-;-;-;-;-;-;-;- 1278 + 1 1.036 65933.3 1.0 10758 4929 15674 HBL1_DMSO_200M_050219_2,15689 HBL1_DMSO_200M_050219_2,15689,ALLKMRRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15690 82.536 134.0 599760.0 25 0 42095.0 + 44691 YPFKPPMI 8 96 496.7675405711997 991.5205282091994 2 496.7673522830009 MULTI CID FTMS 0 0 0 15674 185850.9375 0.0249403317148032 -7 0.8083877563476562 16 Unmodified _YPFKPPMI_ ENSG00000156587|ENST00000287156|UBE2L6 78.44472497914707 0.0986812004920242 4 YP{M(Oxidation (M))|F}KPPM{I|L} 8 0 + 77.905 0.0 0.0 7.8571 7.8571 94.869 0.0 0.0 0.0 61.50550709427471 12.193962872398032 12.193962872398032 17.735097166722156 0 1.3807196863200843 2.0 0.0 0.3054621874040891 + + YP{M(Oxidation (M))|F}KPPM{I|L};YPVM{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};YPVM{I|L}[{I|L}A]W;YPVM{I|L}[RD]V;YP{M(Oxidation (M))|F}[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};YPVA[W{I|L}]M{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}MPM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};YP{M(Oxidation (M))|F}[VP][{I|L}A]W;YP{M(Oxidation (M))|F}[W{I|L}][PG]{I|L} 7.8571;6.0685;5.8909;5.7133;5.3622;5.1403;5.1286;5.0842;4.8765;4.7505 +;-;-;-;-;-;-;-;-;- + 361 + 1 1.036 64335.8 1.0 10759 4929 15674 HBL1_DMSO_200M_050219_2,15690 HBL1_DMSO_200M_050219_2,15690,YPFKPPMI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15691 82.55 788.0 407690.0 25 0 29598.0 -1 0 144 915.4418501566036 1828.869147380007 2 915.9442016482352 MULTI CID FTMS 0 0 0 15674 156892.96875 0.1591342452984544 -3 0.3883514404296875 17 4 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YEV 14 -1 112.61 0.0 0.0 6.1573 0.0 0.0 0.0 127.06197703851866 127.06197703851866 82.01769637140595 0.0 0.0 0.0 0 0.6989700043360187 1.3979400086720375 0.8494850021680094 1.5044321917401078 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YEV 6.1573 - 50670 1 1.036 209222.1 1.0 10760 4929 15674 HBL1_DMSO_200M_050219_2,15691 HBL1_DMSO_200M_050219_2,15691, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15692 82.564 789.0 119580.0 25 0 12704.0 -1 CMYTLWWMLRR 11 93 824.3840963068765 0 824.3840209841728 PEAK CID FTMS 0 0 0 15674 130877.3125 1.0 0 0.0 18 Carbamidomethyl (C),2 Oxidation (M) _C(Carbamidomethyl (C))M(Oxidation (M))YTLWWM(Oxidation (M))LRR_ ENSG00000136802|ENST00000372600|LRRC8A 0.3070304955306653 0.4761840153648598 4 VEVC(Carbamidomethyl (C)) 4 -1 16.983 0.0 0.0 1.0313 0.0 0.0 1027.4669097994963 129.05605493717033 1156.5229647366668 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 VEVC(Carbamidomethyl (C)) 1.0313 - 184 + 1 1.036 68472.6 1.0 10761 4929 15674 HBL1_DMSO_200M_050219_2,15692 HBL1_DMSO_200M_050219_2,15692,CMYTLWWMLRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15693 82.578 800.0 70306.0 25 0 4716.9 + 14812 LIIGGGDGGVLREV 14 94 677.8887206912041 0 677.8887206912041 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _ILELLFLMYTV_ ENSG00000116649|ENST00000376957|SRM 9.38312468134398 0.4559597037863106 4 {I|L}GGGDGR 7 10 34.188 0.0 0.0 2.5254 0.0 0.0 226.16857605558133 512.2865694635374 738.4551455191188 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}GGGDGR 2.5254 - 74 + 1 1.036 49722.2 0.9800000190734864 10762 4929 15674 HBL1_DMSO_200M_050219_2,15693 HBL1_DMSO_200M_050219_2,15693,ILELLFLMYTV False False LIIGGGDGGVLREV 82.577626 677.888720691204 473280.71875 15674.0 ENSG00000116649|ENST00000376957|SRM 6.960482597351074 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15694 82.593 800.0 1584700.0 25 0 222960.0 + 22570 LPWTAEQVV 9 122 1042.5566210495986 1041.5493445829986 1 1042.562792956829 MULTI CID FTMS 0 0 0 15674 121147.53125 0.0145440519377898 -4 0.4801864624023437 20 Unmodified _LPWTAEQVV_ ENSG00000175216|ENST00000529230|CKAP5;ENST00000528593.1_1_11:46804822-46806223:-|nuORF;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 126.56589448801844 0.0036077350702044 4 [{I|L}P]WTAEQVV 9 0 + 107.45 0.0 0.0 10.316 10.316 85.483 0.0 0.0 0.0 2.887254899964361 16.478174818886373 2.887254899964361 2.887254899964361 0 1.2803695511246982 1.5228787452803376 1.8539171939081167 0.3252574989159953 + + [{I|L}P]WTAEQVV;[WP]{I|L}TAEQVV;[WP]T{I|L}AEQVV;[{I|L}P]WTAEN{I|L}V;[WP]TA{I|L}EQVV;[WP]{I|L}TAEN{I|L}V;[{I|L}P]WTAE[AG]VV;[WP]TAE{I|L}QVV;[WP]T{I|L}AEN{I|L}V;[WP]{I|L}TAE[AG]VV 10.316;10.039;9.75;9.6266;9.4377;9.3494;9.1199;9.1064;9.0604;8.8427 +;-;-;-;-;-;-;-;-;- + 14564 1 1.036 780724.9 0.8899999856948853 10763 4929 15674 HBL1_DMSO_200M_050219_2,15694 HBL1_DMSO_200M_050219_2,15694,LPWTAEQVV True True LPWTAEQVV 82.592665 1042.56279295683 600855056.0 15674.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;ENST00000528593.1_1_11:46804822-46806223:-|nuORF;;nc|ENSG00000175216|Q14008-2|CKAP5 7.387718836466472 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15696 82.597 9.8 3780500.0 25 0 799080.0 + 15567 IPYHIVNIV 9 64 534.315955407261 1066.6173578813218 2 534.3162719607353 MULTI CID FTMS 0 0 0 15695 3813898.5 0.0966779835812384 3 -0.3419647216796875 1 Unmodified _IPYHIVNIV_ ENSG00000031698|ENST00000234677|SARS1 24.67388899826682 0.2172451872415813 4 {[QV]|[N{I|L}]|[RA]|[KV]}[WP]VN{I|L}{I|L}V 9 5 + 59.939 0.0 0.0 5.6195 5.6195 55.124 0.0 0.0 0.0 5.051499783199063 16.478174818886373 5.051499783199063 0.0 0 0.805462187404089 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[WP]VN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}VN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]V{I|L}N{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}VN{I|L}{I|L}V;{[WN]|[YH]}P{I|L}VN{I|L}{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}VN{I|L}V;{[WN]|[YH]}P{I|L}{I|L}VN{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}V{I|L}N{I|L}V;{[WN]|[YH]}P{I|L}V{I|L}N{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]VGG{I|L}{I|L}V 5.6195;5.6195;5.3373;5.1459;5.1459;5.1459;5.1459;4.8637;4.8637;4.7562 -;-;-;-;-;-;-;-;-;- 201 1 1.033 34174.6 1.0 10764 4930 15695 HBL1_DMSO_200M_050219_2,15696 HBL1_DMSO_200M_050219_2,15696,IPYHIVNIV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15697 82.598 34.0 2022500.0 25 0 234980.0 28807 PYTCVSCGAR 10 105 528.7315443226397 1055.448535712079 2 528.7321044802666 MULTI CID FTMS 0 0 0 15695 1198387.375 0.1596518975115677 3 -0.3419647216796875 2 Unmodified _PYTCVSCGAR_ ENSG00000106400|ENST00000305105|ZNHIT1;ENST00000485387.1_1_7:100865814-100867236:+|nuORF;ENST00000492315.5_1_7:100864992-100867236:+|nuORF 25.399314129420983 0.3980215340001851 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TMP{I|L} 6 7 44.857 0.0 0.0 4.25 0.0 0.0 0.0 350.08400869475435 350.08400869475435 12.74104976468614 0.0 0.0 0.0 0 0.8807196863200843 1.3010299956639813 0.9674165578762486 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TMP{I|L} 4.25 - 338 1 1.033 59167.1 1.0 10765 4930 15695 HBL1_DMSO_200M_050219_2,15697 HBL1_DMSO_200M_050219_2,15697,PYTCVSCGAR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15698 82.599 10.0 3509000.0 25 0 331740.0 + 22571 LPWTAEQVV 9 69 521.7817312608888 1041.5489095885775 2 521.7827026247978 MULTI CID FTMS 0 0 0 15695 4446089.5 0.1857209256318373 -3 0.3607254028320312 3 Unmodified _LPWTAEQVV_ ENSG00000175216|ENST00000529230|CKAP5;ENST00000528593.1_1_11:46804822-46806223:-|nuORF;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 42.09456458481378 0.0639583784996157 4 [WP]TA{I|L}EQVV 9 2 + 78.632 0.0 0.0 7.5495 7.5495 87.353 0.0 0.0 0.0 20.15794267183232 61.64197490877392 20.15794267183232 6.262874945799766 0 0.8935078169319297 1.3010299956639813 1.781234684152075 0.0 [WP]TA{I|L}EQVV;[WP]TAE{I|L}QVV;[WP]T{I|L}AEQVV;[WP]TA{I|L}E[AG]VV;[WP]TAEQ{I|L}VV;[WP]T{I|L}AE[AG]VV;[WP]TAE{I|L}[AG]VV;[WP]{I|L}TAEQVV;[WP]TAE[AG]{I|L}VV;[WP]{I|L}TAE[AG]VV 7.5495;6.9482;6.9482;6.6654;6.1778;6.0641;6.0641;5.9116;5.2937;5.0275 -;-;-;-;-;-;-;-;-;- 318 1 1.033 38061.8 1.0 10766 4930 15695 HBL1_DMSO_200M_050219_2,15698 HBL1_DMSO_200M_050219_2,15698,LPWTAEQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15699 82.6 16.0 2332000.0 25 0 441870.0 -1 MHLSPMEAIL 10 72 579.2880060373891 1156.561459141578 2 579.2886230349541 MULTI CID FTMS 0 0 0 15695 3256842.0 0.9872743948103893 1 -0.0615768432617187 4 Oxidation (M) _M(Oxidation (M))HLSPMEAIL_ ENSG00000184368|ENST00000379643|MAP7D2 20.453626601364224 0.5043500229302764 4 P{I|L}{I|L} 3 -1 35.445 0.0 0.0 3.0647 0.0 0.0 815.3315296857437 0.0 815.3315296857437 0.0 24.01863755803668 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 P{I|L}{I|L} 3.0647 - 55 1 1.033 35194.1 1.0 10767 4930 15695 HBL1_DMSO_200M_050219_2,15699 HBL1_DMSO_200M_050219_2,15699,MHLSPMEAIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15700 82.602 20.0 2830800.0 25 0 747710.0 + 10915 GAIPRLVQL 9 74 483.80918040928384 965.6038078853676 2 483.8090698122978 MULTI CID FTMS 0 0 0 15695 2692593.0 0.8274261474686743 -1 0.131927490234375 5 Unmodified _GAIPRLVQL_ ENSG00000168036|ENST00000349496|CTNNB1;ENST00000465552.1_1_3:41275683-41277995:+|nuORF 34.10243960390752 0.1078313939113124 4 [{I|L}A]G[RP]V{I|L}Q{I|L} 9 4 + 49.037 0.0 0.0 5.0783 5.0783 76.104 0.0 0.0 0.0 2.430823532262039 29.30454973082746 2.430823532262039 4.378520932511556 0 0.9247425010840048 1.5228787452803376 0.0 0.0 [{I|L}A]G[RP]V{I|L}Q{I|L};[AG]{I|L}[RP]V{I|L}Q{I|L};[{I|L}A]G[RP]V{I|L}[AG]{I|L};[AG]{I|L}[RP]V{I|L}[AG]{I|L};[Q{I|L}][RP]V{I|L}Q{I|L};[VP][R{I|L}]Q{I|L}Q{I|L};[Q{I|L}][RP]V{I|L}[AG]{I|L};[VP][R{I|L}][AG]{I|L}Q{I|L};[VP][R{I|L}]Q{I|L}[AG]{I|L} 5.0783;4.6249;4.1247;3.6713;3.1421;2.3945;2.1829;1.4353;1.4353 -;-;-;-;-;-;-;-;- 139 1 1.033 48098.1 1.0 10768 4930 15695 HBL1_DMSO_200M_050219_2,15700 HBL1_DMSO_200M_050219_2,15700,GAIPRLVQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15701 82.603 15.0 3045900.0 25 0 700740.0 + 35620 SVADYFKQI 9 69 535.7790126296177 1069.5434723260353 2 535.7797119021416 MULTI CID FTMS 0 0 0 15695 2518865.75 0.9602163708843754 -1 0.131927490234375 6 Unmodified _SVADYFKQI_ ENSG00000089280|ENST00000254108|FUS;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 56.17704186161178 0.0281986971544335 4 [VS]ADY{M(Oxidation (M))|F}KQ{I|L} 9 0 + 72.107 0.0 0.0 6.7419 6.7419 90.833 0.0 0.0 0.0 18.46910013008056 11.962724883926654 11.962724883926654 13.015384402724592 0 0.4247425010840047 2.0 0.0 1.1307196863200843 + + [VS]ADY{M(Oxidation (M))|F}KQ{I|L};[VS]ADY{M(Oxidation (M))|F}K[AG]{I|L};WWY{M(Oxidation (M))|F}KQ{I|L};[VS]ADY{M(Oxidation (M))|F}KAAV;WWY{M(Oxidation (M))|F}K[AG]{I|L};WWY{M(Oxidation (M))|F}KAAV;{[YD]|[{M(Oxidation (M))|F}M]}A{M(Oxidation (M))|F}KG[KG][KG];[Q{I|L}][Y{I|L}][HA]SA[PA];[Y{I|L}][Q{I|L}][HA]SA[PA];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q{[YD]|[{M(Oxidation (M))|F}M]}[KG][KG] 6.7419;5.5249;5.1386;5.1331;3.9102;3.5184;1.5572;0.43372;0.20648;0.12835 +;-;-;-;-;-;-;-;-;- + 203 + 1 1.033 42693.5 1.0 10769 4930 15695 HBL1_DMSO_200M_050219_2,15701 HBL1_DMSO_200M_050219_2,15701,SVADYFKQI True True SVADYFKQI 82.602817 535.7808 20894302.0 15695.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487509.6_1_16:31199536-31202756:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 5.798557758331299 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15702 82.604 22.0 3044200.0 25 0 184020.0 + 9914 FPFYGKPMRI 10 61 628.3361852914626 1254.657817649725 2 628.3367797732353 MULTI CID FTMS 0 0 0 15695 2373601.0 0.868834695538741 3 -0.3419647216796875 7 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 52.268347100219714 0.0668375294751462 4 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 7 5 82.995 0.0 0.0 6.615 0.0 0.0 0.0 399.18467127017817 399.18467127017817 41.849104129495416 0.0 0.0 0.0 0 1.3494850021680094 1.6989700043360187 0.0 0.805462187404089 {I|L}M{M(Oxidation (M))|F}YGK{I|L} 6.615 - 542 + 1 1.033 53680.3 1.0 10770 4930 15695 HBL1_DMSO_200M_050219_2,15702 HBL1_DMSO_200M_050219_2,15702,FPFYGKPMRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15703 82.605 25.0 1788200.0 25 0 328980.0 33845 SLERIRAI 8 82 479.2937101543786 956.5728673755572 2 479.2939025759697 MULTI CID FTMS 0 0 0 15695 1156205.5 0.525144548051724 1 -0.0615768432617187 8 Unmodified _SLERIRAI_ ENSG00000029725|ENST00000537505|RABEP1;nc|ENSG00000029725|Q15276-2|RABEP1 19.438996006549623 0.6237395211498085 4 RA{I|L} 3 5 18.416 0.0 0.0 1.9252 0.0 0.0 598.342533978876 0.0 598.342533978876 0.0 7.447274948966939 0.0 0.0 0 0.0 0.0 0.0 0.0 + RA{I|L} 1.9252 + + 153 + 1 1.033 38884.6 1.0 10771 4930 15695 HBL1_DMSO_200M_050219_2,15703 HBL1_DMSO_200M_050219_2,15703,SLERIRAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15704 82.606 30.0 1755500.0 25 0 238500.0 19142 LEAFHLYLL 9 73 559.8143770313816 1117.614201129563 2 559.8143798708916 MULTI CID FTMS 0 0 0 15695 1177247.875 0.2287410572723174 -5 0.6121139526367188 9 Unmodified _LEAFHLYLL_ ENSG00000182885|ENST00000333493|ADGRG3 23.1484247019978 0.2366544122328345 4 SY{I|L}{I|L} 4 6 44.923 0.0 0.0 4.0195 0.0 0.0 623.3405628888687 0.0 623.3405628888687 0.0 34.120768972555595 0.0 0.0 0 0.75 0.0 0.8494850021680094 0.0 SY{I|L}{I|L} 4.0195 - 91 1 1.033 42172.1 1.0 10772 4930 15695 HBL1_DMSO_200M_050219_2,15704 HBL1_DMSO_200M_050219_2,15704,LEAFHLYLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15705 82.608 66.0 543050.0 25 0 84800.0 + 35123 SQYEEQFVTL 10 61 622.2955847244233 1242.5766165156465 2 622.2961913943291 MULTI CID FTMS 0 0 0 15695 765785.4375 0.6991293925227886 1 -0.0615768432617187 10 Unmodified _SQYEEQFVTL_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF 38.61474834105838 0.1721950110283317 4 {M(Oxidation (M))|F}QE[C(Carbamidomethyl (C))D]T{I|L} 7 6 44.953 0.0 0.0 3.6177 0.0 0.0 331.2115697799108 0.0 331.2115697799108 0.0 28.87828984081368 0.0 0.0 0 0.0 0.0 1.6237125054200234 0.0 {M(Oxidation (M))|F}QE[C(Carbamidomethyl (C))D]T{I|L} 3.6177 - 271 + 1 1.033 31050.0 1.0 10773 4930 15695 HBL1_DMSO_200M_050219_2,15705 HBL1_DMSO_200M_050219_2,15705,SQYEEQFVTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15706 82.609 64.0 1012800.0 25 0 107520.0 + 15272 IPHPLIMGV 9 83 488.785984473826 975.557416014452 2 488.7863647341728 MULTI CID FTMS 0 0 0 15695 745914.9375 0.2192673423575367 -2 0.2536697387695312 11 Unmodified _IPHPLIMGV_ ENSG00000166200|ENST00000388901|COPS2;ENST00000559016.1_1_15:49426483-49429634:-|nuORF;nc|ENSG00000166200|P61201-2|COPS2 79.93452657146344 0.0175326119056068 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}P{I|L}MGV 9 3 + 82.114 0.0 0.0 8.4172 8.4172 82.775 0.0 0.0 0.0 2.04119982655925 11.478174818886371 2.04119982655925 2.04119982655925 0 1.75 0.0 0.6989700043360187 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}P{I|L}MGV;[{I|L}P]H{I|L}P{I|L}MGV;[{I|L}P]HP{I|L}{I|L}MGV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P{I|L}{I|L}MGV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}PM{I|L}GV;[{I|L}P]{I|L}HP{I|L}MGV;[{I|L}P]H{I|L}PM{I|L}GV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}MP{I|L}GV;[{I|L}P]HP{I|L}M{I|L}GV;[{I|L}P]H{I|L}MP{I|L}GV 8.4172;8.2079;7.8994;7.7503;7.4927;7.3854;7.2835;7.1841;6.9749;6.9749 -;-;+;-;-;-;-;-;-;- + 397 1 1.033 56840.2 1.0 10774 4930 15695 HBL1_DMSO_200M_050219_2,15706 HBL1_DMSO_200M_050219_2,15706,IPHPLIMGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15707 82.611 49.0 846490.0 25 0 79566.0 881 AEVGTVVLVLS 11 80 543.8243154254932 1085.6340779177865 2 543.8225585818291 MULTI CID FTMS 0 0 0 15695 613122.4375 0.5052218839756442 -2 0.2536697387695312 12 Unmodified _AEVGTVVLVLS_ ENSG00000197410|ENST00000357232|DCHS2 27.628801355627647 0.4434699450731472 4 {NN|[MP]|[D{I|L}]|[EV]}QTVV 6 6 36.604 0.0 0.0 3.3717 0.0 0.0 0.0 427.2564283418676 427.2564283418676 11.709412807357747 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}QTVV 3.3717 - 331 1 1.033 39761.1 1.0 10775 4930 15695 HBL1_DMSO_200M_050219_2,15707 HBL1_DMSO_200M_050219_2,15707,AEVGTVVLVLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15708 82.613 79.0 699560.0 25 0 186550.0 + 36266 SYFEKETLTF 10 63 632.8083214162285 1263.602089899257 2 632.8090698122978 MULTI CID FTMS 0 0 0 15695 613355.0625 0.4287438915989766 1 -0.0615768432617187 13 Unmodified _SYFEKETLTF_ ENSG00000196705|ENST00000311048|ZNF431 17.04857598603903 0.5614834650426465 4 T[KP]QQT{M(Oxidation (M))|F} 7 7 25.52 0.0 0.0 2.0196 0.0 0.0 415.17151696758646 0.0 415.17151696758646 0.0 16.782891498745585 0.0 0.0 0 0.4247425010840047 0.0 1.1307196863200843 0.0 T[KP]QQT{M(Oxidation (M))|F} 2.0196 - 91 + 1 1.033 49228.3 1.0 10776 4930 15695 HBL1_DMSO_200M_050219_2,15708 HBL1_DMSO_200M_050219_2,15708,SYFEKETLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15709 82.624 620.0 170560.0 25 0 31066.0 -1 0 85 1126.8325223334275 3377.4757376004827 3 1127.166796863079 MULTI CID FTMS 0 0 0 15695 316997.125 0.5638530455789051 2 -0.1961517333984375 14 4 G 1 -1 6.9897 0.0 0.0 0.20695 0.0 0.0 1944.669781645208 1372.7591906139653 3317.428972259173 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20695 - 13 + 1 1.033 83602.0 1.0 10777 4930 15695 HBL1_DMSO_200M_050219_2,15709 HBL1_DMSO_200M_050219_2,15709, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15710 82.628 228.0 388360.0 25 0 40166.0 + 45036 YPWGTVQV 8 117 475.2427640821656 948.4709752311312 2 475.2422057986259 MULTI CID FTMS 0 0 0 15695 281232.125 0.0943787228480325 -6 0.717315673828125 15 Unmodified _YPWGTVQV_ ENSG00000125354|ENST00000394610|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6 63.393752934501535 0.1160198504584336 4 [WP]GTYVQV 8 2 + 54.491 0.0 0.0 5.7452 5.7452 78.046 0.0 0.0 0.0 19.731975075880328 37.93666126345022 19.731975075880328 3.7628749457997657 0 0.5629529932484498 1.3010299956639813 1.424742501084005 0.0 [WP]GTYVQV;[WP]GTVYQV;[WP]GYTVQV;[WP]YGTVQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WGTVQV;{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}GTVQV;{[QV]|[N{I|L}]|[RA]|[KV]}[{M(Oxidation (M))|F}E]TVQV;{[SA]|[TG]}[WP]YVQV;[{I|L}P]{[QC]|[C(Carbamidomethyl (C))A]}YVQV;{[SA]|[TG]}KC(Carbamidomethyl (C))GTVQV 5.7452;5.3484;5.0863;4.3493;3.4454;3.0227;1.7855;1.2587;1.1765;1.1511 -;-;-;-;+;-;-;-;-;- + 640 1 1.033 69406.9 1.0 10778 4930 15695 HBL1_DMSO_200M_050219_2,15710 HBL1_DMSO_200M_050219_2,15710,YPWGTVQV True True YPWGTVQV 82.627777 475.242205798626 83913616.0 15695.0 nc|ENSG00000125354|Q14141|SEPTIN6;;ENSG00000125354|ENST00000394610|SEPTIN6;;nc|ENSG00000125354|Q14141-4|SEPTIN6 6.3440046310424805 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15711 82.632 252.0 278080.0 25 0 16802.0 -1 FSWDCLVLVL 10 101 647.3306860142551 1292.64681909531 2 647.3307372927666 MULTI CID FTMS 0 0 0 15695 266498.875 0.9114807188629102 1 -0.0615768432617187 16 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))FSWDC(Carbamidomethyl (C))LVLVL_ ENST00000488868.1_1_1:28555530-28556691:-|nuORF 15.847184025352805 0.5816416552707754 4 {[TV]|[{I|L}S]}[WM]EVSETV{I|L} 11 -1 + 40.058 0.0 0.0 3.0989 3.0989 68.428 0.0 0.0 0.0 13.014258243484456 25.47624604000216 13.014258243484456 3.6878177993082417 0 0.6549471895720985 1.6989700043360187 0.7302046884880938 0.0 {[TV]|[{I|L}S]}[WM]EVSETV{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VSETV{I|L};{[TV]|[{I|L}S]}[WM]EVSTEV{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WETV{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VSTEV{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WTEV{I|L};[R{I|L}]RC(Carbamidomethyl (C))C(Carbamidomethyl (C))SETV{I|L};{[TV]|[{I|L}S]}[WM]EVSEGKK;[{M(Oxidation (M))|F}E]G{I|L}AEVSETV{I|L};[{M(Oxidation (M))|F}V]{I|L}Y[Y{M(Oxidation (M))|F}]ETV{I|L} 3.0989;2.8137;2.7298;2.535;2.4446;2.1659;1.9491;1.8976;1.8927;1.8567 -;-;-;-;-;-;-;-;-;- 1362 1 1.033 59415.1 1.0 10779 4930 15695 HBL1_DMSO_200M_050219_2,15711 HBL1_DMSO_200M_050219_2,15711,FSWDCLVLVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15712 82.636 183.0 408240.0 25 0 31995.0 + 39863 VFIEDAIQY 9 111 549.2784588002891 1096.542364667378 2 549.2775146365166 MULTI CID FTMS 0 0 0 15695 255373.625 1.0 0 0.0 17 Unmodified _VFIEDAIQY_ ENSG00000162341|ENST00000294309|TPCN2 38.15118350030904 0.0856056900103839 4 {[DA]|[EG]}E{I|L}{M(Oxidation (M))|F}V{I|L}QY 9 6 {[DA]|[EG]}E{I|L}{M(Oxidation (M))|F}V{I|L} + + 18.756 21.741 2.7611 1.7104 1.7104 44.413 0.0 0.0 0.0 0.0 -7.747551060119896 -7.747551060119896 0.0 0 0.0 0.0 0.0 0.3807196863200844 {[DA]|[EG]}E{I|L}{M(Oxidation (M))|F}V{I|L}QY 1.7104 - 598 + 1 1.033 63300.7 1.0 10780 4930 15695 HBL1_DMSO_200M_050219_2,15712 HBL1_DMSO_200M_050219_2,15712,VFIEDAIQY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15713 82.639 130.0 476050.0 25 0 30899.0 + 45068 YPYGSPPPLI 10 79 552.2926677062269 0 552.2940551638603 PEAK CID FTMS 0 0 0 15695 230292.390625 0.7415546455763661 -1 0.131927490234375 18 Unmodified _YPYGSPPPLI_ ENSG00000150347|ENST00000279873|ARID5B;nc|ENSG00000150347|Q14865-2|ARID5B 21.74664581756881 0.2842027874392456 4 PP 2 8 9.464 0.0 0.0 0.85835 0.0 0.0 310.08348147302405 595.3585510438406 905.4420325168646 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + PP 0.85835 + + 18 + 1 1.033 57631.0 1.0 10781 4930 15695 HBL1_DMSO_200M_050219_2,15713 HBL1_DMSO_200M_050219_2,15713,YPYGSPPPLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15714 82.641 136.0 354720.0 25 0 23353.0 + 10791 FYQGIVQQF 9 81 565.2864197996229 1128.5582866660457 2 565.2878295779228 MULTI CID FTMS 0 0 0 15695 204346.453125 1.0 0 0.0 19 Unmodified _FYQGIVQQF_ ENSG00000126216|ENST00000261965|TUBGCP3;ENST00000469302.1_1_13:113140309-113144032:-|nuORF 26.88365393820708 0.1891292719743517 4 [AG]{M(Oxidation (M))|F}YG{I|L}V 7 6 16.454 0.0 0.0 1.4579 0.0 0.0 0.0 418.1689183401269 418.1689183401269 -3.148261960087801 0.0 -3.148261960087801 0.0 0 0.0 1.5228787452803376 0.0 0.0 [AG]{M(Oxidation (M))|F}YG{I|L}V 1.4579 - 420 1 1.033 42843.7 1.0 10782 4930 15695 HBL1_DMSO_200M_050219_2,15714 HBL1_DMSO_200M_050219_2,15714,FYQGIVQQF False True FYQGIVQQF 82.641448 565.2871 2066487.625 15695.0 ENST00000469302.1_1_13:113140309-113144032:-|nuORF;;ENSG00000126216|ENST00000261965|TUBGCP3 3.573558807373047 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15715 82.654 667.0 226220.0 25 0 18963.0 6599 EAPRVQPEATL 11 128 605.8264691019732 1209.6383852707463 2 605.8265869021416 MULTI CID FTMS 0 0 0 15695 205097.984375 1.0 0 0.0 20 Unmodified _EAPRVQPEATL_ MER52D_dup518|chr14:71230781-71232935:+|1.82709249221962|0.0272404342012767|6.07|46.0|23|2|sense 29.84058131909904 0.3915366693542702 4 [TA]{I|L}C(Carbamidomethyl (C))[HN]P{I|L}AT 10 7 65.857 0.0 0.0 5.4443 0.0 0.0 0.0 128.0723201674838 128.0723201674838 30.477663024715312 0.0 0.0 0.0 0 1.674742501084005 1.154901959985743 1.064909327626439 0.0 [TA]{I|L}C(Carbamidomethyl (C))[HN]P{I|L}AT 5.4443 - 1952 1 1.033 112104.8 1.0 10783 4930 15695 HBL1_DMSO_200M_050219_2,15715 HBL1_DMSO_200M_050219_2,15715,EAPRVQPEATL False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 15717 82.659 2.4 20670000.0 25 0 3342600.0 + 4617 DAYTVLTRI 9 69 526.2925371206958 1050.5705213081917 2 526.2932617068291 MULTI CID FTMS 0 0 0 15716 21809970.0 1.0 0 0.0 1 Unmodified _DAYTVLTRI_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 40.23920728925047 0.0741434193262949 4 {[DA]|[EG]}YTV{I|L}TR{I|L} 9 0 + 72.839 0.0 0.0 6.9332 6.9332 82.591 0.0 0.0 0.0 12.92429823902063 5.196736054051257 5.196736054051257 3.7628749457997657 0 1.2302046884880935 1.6989700043360187 0.4247425010840047 0.0 + + {[DA]|[EG]}YTV{I|L}TR{I|L};{[DA]|[EG]}Y{I|L}S{I|L}TR{I|L};{[DA]|[EG]}YTV{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DA]|[EG]}YT{I|L}VTR{I|L};{[DA]|[EG]}Y{I|L}S{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DA]|[EG]}Y{I|L}TVTR{I|L};{[DA]|[EG]}YT{I|L}V{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DA]|[EG]}Y{I|L}TV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.9332;6.5751;6.4386;6.1926;6.0804;5.8344;5.6979;5.3397 +;-;-;-;-;-;-;- + 144 + 1 1.033 44175.9 1.0 10784 4931 15716 HBL1_DMSO_200M_050219_2,15717 HBL1_DMSO_200M_050219_2,15717,DAYTVLTRI True True DAYTVLTRI 82.6585 526.293261706829 579413760.0 15716.0 ENSG00000183207|ENST00000595090|RUVBL2;;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;;nc|ENSG00000183207|Q9Y230-2|RUVBL2 6.423826694488525 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15718 82.66 6.0 8837800.0 25 0 1335400.0 + 1628 ALMAAPLSL 9 74 451.75274496202985 901.4909369908596 2 451.7529174685478 MULTI CID FTMS 0 0 0 15716 9493204.0 0.7309536310629137 16 -1.6967544555664062 2 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS 6 4 49.13 0.0 0.0 5.4498 0.0 0.0 0.0 312.1921710821941 312.1921710821941 30.18954998148708 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS 5.4498 - 161 1 1.033 48253.0 1.0 10785 4931 15716 HBL1_DMSO_200M_050219_2,15718 HBL1_DMSO_200M_050219_2,15718,ALMAAPLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15719 82.661 9.6 6097700.0 25 0 1018700.0 + 9919 FPFYGKPMRI 10 56 419.2266078236951 1254.6579940712852 3 419.2267944216728 MULTI CID FTMS 0 0 0 15716 3892848.75 0.7920477896216548 3 -0.3231430053710937 3 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 29.081581746732265 0.3152867722954398 4 PW{I|L}[KG]Y{M(Oxidation (M))|F}PE 9 6 51.872 0.0 0.0 4.1344 0.0 0.0 119.0740452497086 0.0 119.0740452497086 0.0 44.88228758605111 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}[KG]Y{M(Oxidation (M))|F}PE 4.1344 - 87 1 1.033 56036.9 1.0 10786 4931 15716 HBL1_DMSO_200M_050219_2,15719 HBL1_DMSO_200M_050219_2,15719,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15720 82.662 36.0 1589200.0 25 0 102480.0 -1 0 69 881.9067130267736 1761.798873120347 2 881.9064208865166 MULTI CID FTMS 0 0 0 15716 1905688.75 1.0 0 0.0 4 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 15 -1 + 85.23 0.0 0.0 4.8377 4.8377 72.77 0.0 0.0 0.0 4.259687322722812 6.43661522117479 4.259687322722812 3.0102999566398125 0 0.3807196863200844 1.5228787452803376 0.7059771852360797 0.7742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQDQA{M(Oxidation (M))|F}YQ[{I|L}V];{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQW{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]AQQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQDQA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]DA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]AQDQA{M(Oxidation (M))|F}YQ[{I|L}V] 4.8377;4.6668;4.5959;4.4579;4.453;4.425;4.3251;4.3251;4.3251;4.2821 -;-;-;-;-;-;-;-;-;- 2572 1 1.033 48160.5 1.0 10787 4931 15716 HBL1_DMSO_200M_050219_2,15720 HBL1_DMSO_200M_050219_2,15720, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15721 82.663 45.0 840760.0 25 0 89309.0 -1 CEMNLALTI 9 70 540.756285883708 1079.4980188342158 2 540.7564575076103 MULTI CID FTMS 0 0 0 15716 971956.6875 0.4169806137202817 2 -0.2803878784179687 5 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))EM(Oxidation (M))NLALTI_ ENST00000593093.5_1_19:1272938-1273439:+|nuORF 19.256988751693697 0.3154191944385105 4 T{I|L} 2 -1 24.949 0.0 0.0 2.3111 0.0 0.0 847.3552861455424 0.0 847.3552861455424 0.0 8.025012804190577 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 T{I|L} 2.3111 + + 49 + 1 1.033 36048.2 1.0 10788 4931 15716 HBL1_DMSO_200M_050219_2,15721 HBL1_DMSO_200M_050219_2,15721,CEMNLALTI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15722 82.665 56.0 1406400.0 25 0 167940.0 + 41235 VPFSVPKI 8 77 443.772467802316 885.5303826714321 2 443.7729064822197 MULTI CID FTMS 0 0 0 15716 969761.9375 0.5091216506205852 2 -0.2803878784179687 6 Unmodified _VPFSVPKI_ ENSG00000068079|ENST00000415816|IFI35;ENST00000246911.6_1_17:41158964-41165399:+|nuORF;nc|ENSG00000068079|P80217-2|IFI35 49.93300154707207 0.1395624531867191 4 VP{M(Oxidation (M))|F}SVPK{I|L} 8 0 + 71.84 0.0 0.0 8.1127 8.1127 93.574 0.0 0.0 0.0 22.181700560515267 14.024174299985006 14.024174299985006 10.656753288559813 0 1.079689690656103 1.3979400086720375 0.0 0.0 + + VP{M(Oxidation (M))|F}SVPK{I|L};V{I|L}MSVPK{I|L};VP[{M(Oxidation (M))|F}V][{I|L}A]K{I|L};VP[{M(Oxidation (M))|F}V]RR{I|L} 8.1127;6.9093;4.413;4.369 +;-;-;- + 217 + 1 1.033 65399.1 1.0 10789 4931 15716 HBL1_DMSO_200M_050219_2,15722 HBL1_DMSO_200M_050219_2,15722,VPFSVPKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15723 82.666 58.0 806130.0 25 0 133380.0 6718 EDGAVQSHYWG 11 60 624.7669993871459 1247.5194458410915 2 624.7680541872978 MULTI CID FTMS 0 0 0 15716 925194.375 0.6114756980387485 2 -0.2803878784179687 7 Unmodified _EDGAVQSHYWG_ ENST00000409185.5_1_2:131809922-131810471:-|nuORF 5.296884461304476 0.8501568894076437 4 YY{I|L} 3 10 15.662 0.0 0.0 1.2554 0.0 0.0 790.3016246514418 0.0 790.3016246514418 0.0 -2.283474859079389 -2.283474859079389 0.0 0 0.0 0.0 0.0 0.0 YY{I|L} 1.2554 - 173 + 1 1.033 40358.9 1.0 10790 4931 15716 HBL1_DMSO_200M_050219_2,15723 HBL1_DMSO_200M_050219_2,15723,EDGAVQSHYWG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15724 82.667 48.0 1099800.0 25 0 65892.0 + 45672 YVTEELPQL 9 81 546.2835025216945 1090.5524521101888 2 546.2839233279228 MULTI CID FTMS 0 0 0 15716 835954.6875 0.5636863087604028 -1 0.0615768432617187 8 Unmodified _YVTEELPQL_ ENSG00000139684|ENST00000378720|ESD 70.71552829651908 0.0208223590022201 4 EET{I|L}M{I|L}K{NN|[MP]|[D{I|L}]|[EV]} 9 6 + 38.54 0.0 0.0 3.534 3.534 68.221 0.0 0.0 0.0 6.610367599119165 3.759457149658701 3.759457149658701 3.0102999566398125 0 0.0 1.5228787452803376 0.0 0.0 EET{I|L}M{I|L}K{NN|[MP]|[D{I|L}]|[EV]};EE{I|L}TM{I|L}K{NN|[MP]|[D{I|L}]|[EV]};[YV]T[HC]{I|L}K{NN|[MP]|[D{I|L}]|[EV]};{[ET]|[MV]}E{I|L}M{I|L}K{NN|[MP]|[D{I|L}]|[EV]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}YV{I|L}E[DP];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y{[QS]|[NT]}PQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}EETP{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}EETM{I|L};{[QN]|[E{I|L}]|[KN]}ETM{I|L}K{NN|[MP]|[D{I|L}]|[EV]};[{I|L}P]{[{M(Oxidation (M))|F}D]|MM}M{I|L}K{NN|[MP]|[D{I|L}]|[EV]} 3.534;3.2579;2.8733;2.8603;2.4907;2.4165;2.4137;2.3411;2.299;2.1057 -;-;-;-;-;-;-;-;-;- 356 1 1.033 48984.3 1.0 10791 4931 15716 HBL1_DMSO_200M_050219_2,15724 HBL1_DMSO_200M_050219_2,15724,YVTEELPQL True True YVTEELPQL 82.667498 546.283923327923 36723480.0 15716.0 ENSG00000139684|ENST00000378720|ESD 6.608632246653239 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15725 82.676 459.0 489660.0 25 0 86775.0 + 16303 IWPNARISVM 10 137 593.8224900911056 1185.630427249011 2 593.8238403201103 MULTI CID FTMS 0 0 0 15716 416348.0 0.8112263866605373 -2 0.1935043334960937 9 Unmodified _IWPNARISVM_ ENSG00000131844|ENST00000340941|MCCC2;nc|ENSG00000131844|Q9HCC0-2|MCCC2 36.506200033944 0.1944608063770638 4 {I|L}W[{M(Oxidation (M))|F}T]S{I|L}Q 7 7 65.112 0.0 0.0 5.4917 0.0 0.0 0.0 307.14719568424067 307.14719568424067 48.940935587374526 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 1.0994850021680094 {I|L}W[{M(Oxidation (M))|F}T]S{I|L}Q 5.4917 - 1683 + 1 1.033 167058.7 1.0 10792 4931 15716 HBL1_DMSO_200M_050219_2,15725 HBL1_DMSO_200M_050219_2,15725,IWPNARISVM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15726 82.685 546.0 388370.0 25 0 40101.0 + 40825 VLMTEDIKL 9 188 531.2992613260408 1060.5839697188817 2 531.2996093630791 MULTI CID FTMS 0 0 0 15716 329843.25 0.9122410663980268 -1 0.0615768432617187 10 Unmodified _VLMTEDIKL_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 51.629811660486645 0.0367964933207742 4 V{I|L}MTED{I|L}K{I|L} 9 0 + 89.35 0.0 0.0 8.4246 8.4246 91.258 0.0 0.0 0.0 15.083559388717376 8.863203766078499 8.863203766078499 8.863203766078499 0 0.4247425010840047 2.0 1.1861818737241734 0.5138793319624578 + + V{I|L}MTED{I|L}K{I|L};V{I|L}MTE[R{I|L}]TV;V{I|L}MTEK{I|L}EV;V{I|L}MTE[R{I|L}]S{I|L};V{I|L}MTEDK{I|L}{I|L};{I|L}VMTED{I|L}K{I|L};V{I|L}MTEK{I|L}D{I|L};V{I|L}{M(Oxidation (M))|F}[DV]D{I|L}K{I|L};V{I|L}MTEKKNV;V{M(Oxidation (M))|F}PTED{I|L}K{I|L} 8.4246;7.5889;7.3844;7.0921;7.0428;7.0024;6.8877;6.7475;6.7423;6.5236 +;-;-;-;-;-;-;-;-;- + 4102 + 1 1.033 170944.6 1.0 10793 4931 15716 HBL1_DMSO_200M_050219_2,15726 HBL1_DMSO_200M_050219_2,15726,VLMTEDIKL True True VLMTEDIKL 82.68524 531.299609363079 3842025.0 15716.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 5.661158402760823 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15727 82.687 94.0 393950.0 25 0 48335.0 + 8240 EQDFALVSL 9 61 511.2640989228069 1020.5136449124138 2 511.2640563845634 MULTI CID FTMS 0 0 0 15716 312137.90625 0.5414089732279238 -1 0.0615768432617187 11 Unmodified _EQDFALVSL_ REV__ENSG00000132024|ENST00000318003|CC2D1A;REV__nc|ENSG00000132024|Q6P1N0-2|CC2D1A 21.53697664764585 0.2571576504437394 4 {[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}A{I|L} 6 -1 24.258 0.0 0.0 2.377 0.0 0.0 0.0 314.17060227008886 314.17060227008886 1.3380312008851547 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}A{I|L} 2.377 - 81 1 1.033 34365.1 1.0 10794 4931 15716 HBL1_DMSO_200M_050219_2,15727 HBL1_DMSO_200M_050219_2,15727,EQDFALVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15728 82.69 144.0 529780.0 25 0 48796.0 + 34006 LPAPPAPPVF 10 102 502.7882394122482 1003.5619258912964 2 503.2915527224541 MULTI CID FTMS 0 0 0 15716 286653.0 0.975052904102518 -1 0.0615768432617187 12 Unmodified _SLISQSTRL_ nc|ENSG00000143379|Q15047-3|SETDB1;ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047|SETDB1 14.838274106304384 0.4350285940865338 4 {I|L}PAP[WR] 6 7 18.249 0.0 0.0 1.8184 0.0 0.0 265.1427174298844 0.0 265.1427174298844 0.0 0.6863623584101255 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}PAP[WR] 1.8184 - 237 1 1.033 60306.4 1.0 10795 4931 15716 HBL1_DMSO_200M_050219_2,15728 HBL1_DMSO_200M_050219_2,15728,SLISQSTRL False False LPAPPAPPVF 82.690191 503.291552722454 6974540.0 15716.0 nc|ENSG00000143379|Q15047-3|SETDB1;;ENSG00000143379|ENST00000692827|SETDB1;;nc|ENSG00000143379|Q15047|SETDB1 2.722788413365682 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15729 82.704 800.0 161260.0 25 0 16131.0 + 17876 KQLNHFWEI 9 143 405.5487236734911 0 405.5488464236259 PEAK CID FTMS 0 0 0 15716 214940.640625 1.0 0 0.0 13 Unmodified _KQLNHFWEI_ ENSG00000079246|ENST00000392132|XRCC5 25.399314129420983 0.152124705672316 4 H 1 8 6.9897 0.0 0.0 0.8639 0.0 0.0 188.7418614608144 480.2618807428344 669.0037422036488 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 0.8639 + + 70 + 1 1.033 104171.0 0.9700000286102296 10796 4931 15716 HBL1_DMSO_200M_050219_2,15729 HBL1_DMSO_200M_050219_2,15729,KQLNHFWEI False True KQLNHFWEI 82.704006 405.548846423626 1314990.0 15716.0 ENSG00000079246|ENST00000392132|XRCC5 5.139657974243164 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15730 82.716 691.0 215970.0 25 0 27866.0 + 10707 FVYPLDFARTR 11 114 692.8726984348737 1383.7308439365472 2 692.8729736208916 MULTI CID FTMS 0 0 0 15716 166911.84375 1.0 0 0.0 14 Unmodified _FVYPLDFARTR_ ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6 61.08992128646608 0.0647217981198246 4 {[DA]|[EG]}V{I|L}YRTRY{NN|[MP]|[D{I|L}]|[EV]} 11 10 + 72.388 0.0 0.0 5.2314 5.2314 81.056 0.0 0.0 0.0 8.750612633916994 7.367585652254178 7.367585652254178 8.750612633916994 0 0.6989700043360187 0.9208187539523752 0.3494850021680094 0.8494850021680094 {[DA]|[EG]}V{I|L}YRTRY{NN|[MP]|[D{I|L}]|[EV]};[Y{I|L}]DAVRTRY{NN|[MP]|[D{I|L}]|[EV]};{[DA]|[EG]}VY{I|L}RTRY{NN|[MP]|[D{I|L}]|[EV]};{[DA]|[EG]}V{I|L}YRT[VG]Y{NN|[MP]|[D{I|L}]|[EV]};{[DA]|[EG]}V{I|L}Y[VG]TRY{NN|[MP]|[D{I|L}]|[EV]};[{I|L}P]DHVRTRY{NN|[MP]|[D{I|L}]|[EV]};[{I|L}P]TSYRTRY{NN|[MP]|[D{I|L}]|[EV]};{[DA]|[EG]}Y{I|L}VRTRY{NN|[MP]|[D{I|L}]|[EV]};{[VA]|[{I|L}G]}D{I|L}YRTRY{NN|[MP]|[D{I|L}]|[EV]};{[DA]|[EG]}V{I|L}YRTR{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.2314;4.599;4.5787;4.5717;4.5717;4.4884;4.4515;4.4515;4.3242;4.2726 -;-;-;-;-;-;-;-;-;- 2962 1 1.033 108226.3 1.0 10797 4931 15716 HBL1_DMSO_200M_050219_2,15730 HBL1_DMSO_200M_050219_2,15730,FVYPLDFARTR True True FVYPLDFARTR 82.716025 692.872973620892 905189.125 15716.0 ENSG00000151729|ENST00000281456|SLC25A4;;ENSG00000169100|ENST00000381401|SLC25A6;;ENSG00000005022|ENST00000317881|SLC25A5 6.989131768544515 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15731 82.719 154.0 346540.0 25 0 23829.0 + 15650 IQLEDTLAQV 10 89 565.3088216216362 1128.6030903100725 2 565.3080322146416 MULTI CID FTMS 0 0 0 15716 162754.5 0.6420553883205858 -1 0.0615768432617187 15 Unmodified _IQLEDTLAQV_ ENSG00000103549|ENST00000324685|RNF40;ENSG00000155827|ENST00000389120|RNF20;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40 21.53697664764585 0.484802182336468 4 Q{M(Oxidation (M))|F} 2 9 14.949 0.0 0.0 1.3245 0.0 0.0 835.465255692688 0.0 835.465255692688 0.0 -0.0034068823872246 -0.0034068823872246 0.0 0 0.0 0.0 0.0 0.3494850021680094 Q{M(Oxidation (M))|F} 1.3245 - 253 + 1 1.033 48872.3 1.0 10798 4931 15716 HBL1_DMSO_200M_050219_2,15731 HBL1_DMSO_200M_050219_2,15731,IQLEDTLAQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15732 82.732 732.0 212780.0 25 0 17224.0 -1 0 138 670.6724048917235 2008.9953852753704 3 670.6722289919853 MULTI CID FTMS 0 0 0 15716 138858.25 0.12608065345577 -3 0.31524658203125 16 4 {[TV]|[{I|L}S]}Q[HT]W[QT]NG{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]} 17 -1 + 74.429 0.0 0.0 3.7048 3.7048 66.34 0.0 0.0 0.0 5.221900412478391 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.3252574989159953 1.6989700043360187 0.5891368308784531 0.6989700043360187 {[TV]|[{I|L}S]}Q[HT]W[QT]NG{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};{[TV]|[{I|L}S]}Q[HT]W{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}K{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}Q[HT]W{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};[H{I|L}]{[MG]|[TS]}QW[QT]NG{M(Oxidation (M))|F}{I|L}H{I|L}K{[TV]|[{I|L}S]};[H{I|L}]{[MG]|[TS]}QW[QT]NG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};[H{I|L}][NP]{I|L}N[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}K{[TV]|[{I|L}S]};[H{I|L}][NP]{I|L}N[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};[H{I|L}]{[MG]|[TS]}QW{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}K{[TV]|[{I|L}S]};[H{I|L}]{[MG]|[TS]}QW{NN|[MP]|[D{I|L}]|[EV]}DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};[{I|L}T]N[HT]W[QT]NG{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]} 3.7048;3.6172;3.6172;3.4449;3.4449;3.4116;3.4116;3.3572;3.3572;3.2404 -;-;-;-;-;-;-;-;-;- 2692 1 1.033 122742.2 1.0 10799 4931 15716 HBL1_DMSO_200M_050219_2,15732 HBL1_DMSO_200M_050219_2,15732, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15733 82.747 800.0 315890.0 25 0 34036.0 -1 FPFYGKPMRI 10 134 424.5583924761551 1270.6533480286653 3 424.5584289431572 MULTI CID FTMS 0 0 0 15716 130450.65625 0.5245112008411437 3 -0.3231430053710937 17 Oxidation (M) _FPFYGKPM(Oxidation (M))RI_ ENSG00000125870|ENST00000246071|SNRPB2 23.80106514851385 0.4339316747945569 4 {I|L}KGY{M(Oxidation (M))|F}PE 7 -1 49.526 0.0 0.0 3.8977 0.0 0.0 418.2012806623063 0.0 418.2012806623063 0.0 16.021372885250074 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3252574989159953 {I|L}KGY{M(Oxidation (M))|F}PE 3.8977 - 1099 1 1.033 196317.9 0.8199999928474426 10800 4931 15716 HBL1_DMSO_200M_050219_2,15733 HBL1_DMSO_200M_050219_2,15733,FPFYGKPMRI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15734 82.76 745.0 169800.0 25 0 10842.0 + + 34380 SLTEELAYLK 10 164 583.3211951982167 1164.6278374632334 2 583.8253661990166 MULTI CID FTMS 0 0 0 15716 166855.546875 0.8973360633008272 1 -0.1345748901367187 18 Unmodified _SLTQVWRLY_ ENSG00000186395|ENST00000269576|KRT10;P13645 16.942295170755138 0.3780752226737986 4 [KA]TEE{I|L}APPP{I|L} 11 -1 + 44.889 0.0 0.0 3.8544 3.8544 75.479 0.0 0.0 0.0 10.062161735619902 12.060323256818217 10.062161735619902 8.336685782334747 0 0.0 0.0 0.0 0.0 [KA]TEE{I|L}APPP{I|L};[KA]TEE{I|L}AKY{I|L};[KA]TEE{I|L}AYK{I|L};[KA]TEE{I|L}AY{I|L}K;[KA]TEE{I|L}[KP]H{I|L};[KA][RV]C(Carbamidomethyl (C))GAPPP{I|L};[KA]AA{I|L}C(Carbamidomethyl (C))GAPPP{I|L};[KA]{[SA]|[TG]}QWAPPP{I|L};[KA]TEE{I|L}[HK]P{I|L};[KA]AA{[C(Carbamidomethyl (C))G]|[NC]}{I|L}APPP{I|L} 3.8544;3.1386;2.654;2.4763;2.1967;2.1354;2.035;2.0095;1.9382;1.8263 -;-;-;-;-;-;-;-;-;- 3049 + 1 1.033 99465.7 1.0 10801 4931 15716 HBL1_DMSO_200M_050219_2,15734 HBL1_DMSO_200M_050219_2,15734,SLTQVWRLY False False SLTEELAYLK 82.759973 583.825366199017 353974.40625 15716.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 1.0329038575291634 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15735 82.774 800.0 172110.0 25 0 20844.0 10076 FPRVWVRDLPL 11 151 466.6082064769709 1396.8027900311126 3 466.6091186404228 MULTI CID FTMS 0 0 0 15716 113057.3515625 0.2665475510289034 4 -0.5288772583007812 19 Unmodified _FPRVWVRDLPL_ ENST00000324464.7_1_19:41222516-41222675:-|nuORF 6.2057823575117 0.8458686499021061 4 {NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]K{M(Oxidation (M))|F}P 7 9 17.235 0.0 0.0 1.2339 0.0 0.0 0.0 609.331336686987 609.331336686987 2.6264519390626795 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]K{M(Oxidation (M))|F}P 1.2339 - 450 1 1.033 117922.2 0.8399999737739563 10802 4931 15716 HBL1_DMSO_200M_050219_2,15735 HBL1_DMSO_200M_050219_2,15735,FPRVWVRDLPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15736 82.789 800.0 354910.0 25 0 27037.0 + -1 SIFPDFSKA 9 235 506.2628582408572 1010.5111635485144 2 506.2595703005791 MULTI CID FTMS 0 0 0 15716 103894.3359375 0.1361479571778882 -10 1.10101318359375 20 Oxidation (M) _TVFM(Oxidation (M))AVGASI_ ENSG00000112149|ENST00000379153|CD83 22.736283301280096 0.4578556481593033 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PD{M(Oxidation (M))|F}S[KA] 9 -1 + 54.478 0.0 0.0 5.3911 5.3911 84.383 0.0 0.0 0.0 29.72873889999784 2.1792500248472635 2.1792500248472635 9.987737688117235 0 0.7134679910804405 2.0 0.3252574989159953 0.4247425010840047 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PD{M(Oxidation (M))|F}S[KA];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P{[CT]|[{M(Oxidation (M))|F}G]}KC{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[HS]PN{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[HS]NP{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[HS]QPV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[HS]PQV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P{[{M(Oxidation (M))|F}C]|[YS]}V[KA];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P{[{M(Oxidation (M))|F}C]|[YS]}KG{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P{[{M(Oxidation (M))|F}C]|[YS]}KAV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[YT]GN{I|L} 5.3911;4.4027;4.2189;4.087;3.9999;3.9993;3.9293;3.9137;3.6942;3.6496 -;-;-;-;-;-;-;-;-;- 3099 + 1 1.033 219793.7 0.9100000262260436 10803 4931 15716 HBL1_DMSO_200M_050219_2,15736 HBL1_DMSO_200M_050219_2,15736,TVFMAVGASI False False SIFPDFSKA 82.788774 506.259570300579 1917508.0 15716.0 ENSG00000112149|ENST00000379153|CD83 5.214503129323323 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15738 82.793 33.0 2077500.0 25 0 279170.0 + 27613 PLESTGHLA 9 88 462.7437540417929 923.4729551503858 2 462.7437316775322 MULTI CID FTMS 0 0 0 15737 1167552.125 0.4426190829114581 18 -1.9496917724609373 1 Unmodified _PLESTGHLA_ REV__ENSG00000157423|ENST00000393567|HYDIN;REV__ENST00000378856.8_2_16:70845233-70899022:-|nuORF;REV__nc|ENSG00000157423|Q4G0P3-2|HYDIN 13.50788311687929 0.4710407108020397 4 [{I|L}A]{[{M(Oxidation (M))|F}H]|[RQ]}AT 6 -1 40.647 0.0 0.0 4.4016 0.0 0.0 0.0 280.1096590631469 280.1096590631469 20.981362441963324 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8494850021680094 0.0 [{I|L}A]{[{M(Oxidation (M))|F}H]|[RQ]}AT 4.4016 - 242 + 1 1.032 59805.4 1.0 10804 4932 15737 HBL1_DMSO_200M_050219_2,15738 HBL1_DMSO_200M_050219_2,15738,PLESTGHLA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15739 82.795 66.0 1027300.0 25 0 201300.0 -1 LALETCFS 8 72 470.7263908802107 939.4382288272216 2 470.7264587283134 MULTI CID FTMS 0 0 0 15737 785831.3125 0.2470186371718844 -9 1.030517578125 2 Carbamidomethyl (C) _LALETC(Carbamidomethyl (C))FS_ ENST00000528706.5_1_11:117279912-117282881:+|nuORF 19.438996006549623 0.6237395211498085 4 {I|L}A{I|L} 3 -1 45.93 0.0 0.0 4.8891 0.0 0.0 0.0 639.2096076714524 639.2096076714524 30.09240722229545 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 {I|L}A{I|L} 4.8891 + + 41 + 1 1.032 57296.8 1.0 10805 4932 15737 HBL1_DMSO_200M_050219_2,15739 HBL1_DMSO_200M_050219_2,15739,LALETCFS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15740 82.796 29.0 1844800.0 25 0 188060.0 + 26067 NMVDIIHSV 9 80 514.2656279015097 1026.5167028698193 2 514.2661620974541 MULTI CID FTMS 0 0 0 15737 1558791.375 0.4940802280997323 -1 0.1345748901367187 3 Unmodified _NMVDIIHSV_ ENSG00000114054|ENST00000251654|PCCB;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;nc|ENSG00000114054|P05166-2|PCCB 96.28474662873226 0.0124266067997264 4 [MN]VD{I|L}{I|L}HSV 9 0 + 75.974 0.0 0.0 7.4012 7.4012 95.908 0.0 0.0 0.0 55.03977796201987 16.756368635175605 16.756368635175605 61.11432819416656 0 1.1549471895720984 1.6989700043360187 2.0356668758921828 0.0 + + [MN]VD{I|L}{I|L}HSV;[HS]V{I|L}{I|L}DV[MN];[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}VSV[MN];[HS]V{I|L}EVV[MN];[HS]V{I|L}[{M(Oxidation (M))|F}V]YY;[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}SVV[MN];[H{I|L}][VS]{I|L}DV[MN];[H{I|L}]{[TV]|[{I|L}S]}VDV[MN];[H{I|L}][VS]EVV[MN];[HS]{I|L}{I|L}VDV[MN] 7.4012;1.4476;1.3738;1.1544;0.99046;0.78734;0.61579;0.49408;0.32254;0.25732 +;-;-;-;-;-;-;-;-;- + 163 + 1 1.032 44051.6 1.0 10806 4932 15737 HBL1_DMSO_200M_050219_2,15740 HBL1_DMSO_200M_050219_2,15740,NMVDIIHSV True True NMVDIIHSV 82.795843 514.266162097454 48474956.0 15737.0 ENSG00000114054|ENST00000251654|PCCB;;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;;nc|ENSG00000114054|P05166-2|PCCB 9.64128875732422 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15741 82.798 108.0 911570.0 25 0 68330.0 + 31920 RVADDVFTL 9 105 518.2772567201931 1034.5399605071862 2 518.2784301638603 MULTI CID FTMS 0 0 0 15737 738788.6875 0.966753121929728 -2 0.1961517333984375 4 Unmodified _RVADDVFTL_ ENSG00000078246|ENST00000448120|TULP3;nc|ENSG00000078246|O75386-2|TULP3 27.628801355627647 0.1796483985696185 4 {[QN]|[E{I|L}]|[KN]}[WQ]V{M(Oxidation (M))|F}T{I|L} 8 5 + 43.561 0.0 0.0 4.2107 4.2107 69.137 0.0 0.0 0.0 2.3947823792007483 5.797349202424584 2.3947823792007483 2.3947823792007483 0 0.7742275032520141 1.6989700043360187 0.0 0.7614393726401688 {[QN]|[E{I|L}]|[KN]}[WQ]V{M(Oxidation (M))|F}T{I|L};{[VA]|[{I|L}G]}[RD]DV{M(Oxidation (M))|F}T{I|L};[{I|L}T][RD]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}T{I|L} 4.2107;3.9792;2.4148 -;-;- 160 1 1.032 80694.7 1.0 10807 4932 15737 HBL1_DMSO_200M_050219_2,15741 HBL1_DMSO_200M_050219_2,15741,RVADDVFTL False True RVADDVFTL 82.798147 518.27843016386 8587274.0 15737.0 nc|ENSG00000078246|O75386-2|TULP3;;ENSG00000078246|ENST00000448120|TULP3 2.973679224650065 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15742 82.801 127.0 491630.0 25 0 86792.0 1478 ALGADISMY 9 67 314.15352150719866 939.438735121796 3 314.1533080935478 MULTI CID FTMS 0 0 0 -1 0 5 Unmodified _ALGADISMY_ ENSG00000116761|ENST00000370938|CTH;nc|ENSG00000116761|P32929-2|CTH;nc|ENSG00000116761|P32929-3|CTH 18.13498045792455 0.3457906370836843 4 A{I|L}{I|L} 3 6 48.94 0.0 0.0 5.2095 0.0 0.0 0.0 639.2104278651998 639.2104278651998 38.48258770979733 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 A{I|L}{I|L} 5.2095 - 32 + 1 1.032 56605.0 1.0 10808 4932 15737 HBL1_DMSO_200M_050219_2,15742 HBL1_DMSO_200M_050219_2,15742,ALGADISMY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15743 82.803 107.0 907450.0 25 0 110980.0 + 3898 DALDKIRLI 9 133 528.8237779724682 1055.6330030117365 2 528.8243896365166 MULTI CID FTMS 0 0 0 15737 457968.3125 0.0051395734552425 9 -0.8815536499023438 6 Unmodified _DALDKIRLI_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 31.26834338654808 0.1333407332142048 4 DA{I|L}DK{I|L}R{I|L}{I|L} 9 0 + 77.84 0.0 0.0 7.3738 7.3738 94.757 0.0 0.0 0.0 42.31967985107542 11.905201595035749 11.905201595035749 26.963398747303245 0 0.805462187404089 1.5228787452803376 0.0 0.0 + + DA{I|L}DK{I|L}R{I|L}{I|L};{I|L}DADK{I|L}R{I|L}{I|L} 7.3738;4.8195 +;- + 356 + 1 1.032 82797.0 1.0 10809 4932 15737 HBL1_DMSO_200M_050219_2,15743 HBL1_DMSO_200M_050219_2,15743,DALDKIRLI False True DALDKIRLI 82.803028 528.824389636517 3252861248.0 15737.0 ENSG00000166598|ENST00000299767|HSP90B1;;ENST00000548462.5_1_12:104324233-104336580:+|nuORF 4.307078838348389 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15744 82.807 217.0 684900.0 25 0 132050.0 + 10469 FTIRDLQRL 9 105 387.8963553998336 1160.6672367997007 3 387.8961059451103 MULTI CID FTMS 0 0 0 15737 447656.5 1.0 0 0.0 7 Unmodified _FTIRDLQRL_ ENSG00000149262|ENST00000534064|INTS4;ENST00000533180.1_1_11:77612465-77632469:-|nuORF 55.23464941255904 0.0288927259679799 4 {M(Oxidation (M))|F}T{I|L}RD{I|L}QR{I|L} 9 0 + 79.545 0.0 0.0 6.8534 6.8534 59.953 0.0 0.0 0.0 11.271211393095244 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 1.2302046884880935 + + {M(Oxidation (M))|F}T{I|L}RD{I|L}QR{I|L};{M(Oxidation (M))|F}T{I|L}RD{I|L}Q{I|L}R;{M(Oxidation (M))|F}{I|L}TRD{I|L}QR{I|L};{M(Oxidation (M))|F}{I|L}TRD{I|L}Q{I|L}R;{M(Oxidation (M))|F}T{I|L}R{I|L}DQR{I|L};{M(Oxidation (M))|F}T{I|L}R{I|L}DQ{I|L}R;{M(Oxidation (M))|F}T{I|L}RD{I|L}[AG]{I|L}R;{M(Oxidation (M))|F}T{I|L}RD{I|L}[AG]R{I|L};{M(Oxidation (M))|F}{I|L}TR{I|L}DQR{I|L};{M(Oxidation (M))|F}{I|L}TR{I|L}DQ{I|L}R 6.8534;6.8534;6.6111;6.6111;6.1252;6.1252;6.06;6.06;5.8829;5.8829 +;-;-;-;-;-;-;-;-;- + 1205 + 1 1.032 125194.6 1.0 10810 4932 15737 HBL1_DMSO_200M_050219_2,15744 HBL1_DMSO_200M_050219_2,15744,FTIRDLQRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15745 82.812 238.0 481550.0 25 0 35086.0 + 31976 RVFIGNLNTL 10 119 573.8351294612718 1145.6557059893437 2 573.8354980349541 MULTI CID FTMS 0 0 0 15737 402118.5625 0.2428906534376599 -2 0.1961517333984375 8 Unmodified _RVFIGNLNTL_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 88.95385435242217 0.009729780394035 4 [RV]{M(Oxidation (M))|F}{I|L}GN{I|L}NT{I|L} 10 0 + 94.536 0.0 0.0 8.2517 8.2517 91.611 0.0 0.0 0.0 18.25643416741073 64.63517630408796 18.25643416741073 9.164539485499262 0 0.8807196863200843 0.9208187539523752 0.3494850021680094 1.841129063296272 + + [RV]{M(Oxidation (M))|F}{I|L}GN{I|L}NT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GN{I|L}GGT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GGG{I|L}NT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GGG{I|L}GGT{I|L};[RV]{M(Oxidation (M))|F}{I|L}GN[KA]E{I|L};[RV]{M(Oxidation (M))|F}{I|L}G[KA]NE{I|L};[RV]{M(Oxidation (M))|F}{I|L}GGG[KA]E{I|L};[RV]{M(Oxidation (M))|F}{I|L}G[KA]GGE{I|L};[RV]{M(Oxidation (M))|F}{I|L}[KQ]NE{I|L};[RV]{M(Oxidation (M))|F}[KQ]{I|L}NE{I|L} 8.2517;7.4517;7.4517;6.6549;5.8463;5.5835;5.0463;4.7836;4.681;4.4183 +;-;-;-;-;-;-;-;-;- + 1044 1 1.032 91703.9 1.0 10811 4932 15737 HBL1_DMSO_200M_050219_2,15745 HBL1_DMSO_200M_050219_2,15745,RVFIGNLNTL True True RVFIGNLNTL 82.811595 573.835498034954 23751256.0 15737.0 nc|ENSG00000092199|P07910-3|HNRNPC;;nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;ENSG00000179172|ENST00000317869|HNRNPCL1;;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;;ENSG00000277058|ENST00000617807|HNRNPCL3;;ENSG00000275774|ENST00000621994|HNRNPCL2;;nc|ENSG00000092199|P07910|HNRNPC;;ENSG00000179412|ENST00000323770|HNRNPCL4 6.976131757100423 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15746 82.821 561.0 331560.0 25 0 36248.0 + 12715 GVLSSDGVWRV 11 168 587.8143947223818 1173.6142365115636 2 587.8147460818291 MULTI CID FTMS 0 0 0 15737 294657.59375 0.058002715466956 4 -0.4917068481445312 9 Unmodified _GVLSSDGVWRV_ ENSG00000125459|ENST00000245564|MSTO1;ENST00000483734.5_1_1:155580745-155584061:+|nuORF;nc|ENSG00000125459|Q9BUK6-2|MSTO1;nc|ENSG00000125459|Q9BUK6-3|MSTO1 74.19965305603844 0.0202339408097979 4 [VG]{I|L}SSDVGVWR 11 2 + 93.506 0.0 0.0 7.9673 7.9673 79.906 0.0 0.0 0.0 11.301438553739471 0.9691001300805624 0.9691001300805624 0.9691001300805624 0 1.579689690656103 1.6989700043360187 1.0994850021680094 0.7742275032520141 [VG]{I|L}SSDVGVWR;[VG]{I|L}SSDVGWVR;[VG]{I|L}SSDGVVWR;[VG]{I|L}SSDGVWVR;[VG]{I|L}SSVDGVWR;[VG]{I|L}SSVDGWVR;[VG]{I|L}SVSDGVWR;[VG]{I|L}SVSDGWVR;[VG]{I|L}VSSDGVWR;[VG]{I|L}VSSDGWVR 7.9673;7.8847;7.5379;7.4554;7.1152;7.0327;6.6723;6.5897;6.0745;5.992 -;-;-;-;-;-;-;-;-;- 9868 + 1 1.032 139902.5 1.0 10812 4932 15737 HBL1_DMSO_200M_050219_2,15746 HBL1_DMSO_200M_050219_2,15746,GVLSSDGVWRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15747 82.832 576.0 376430.0 25 0 30341.0 + 42241 SVIRDIGAIAQV 12 137 621.3638175875544 1240.7130822419088 2 621.3633911013603 MULTI CID FTMS 0 0 0 15737 277799.84375 1.0 0 0.0 10 Unmodified _VSLSKVEPRNI_ ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2;ENST00000521983.1_1_8:26484742-26500445:+|nuORF 18.373094154950223 0.6529654022026722 4 [VS][R{I|L}]D{I|L}GA{I|L}AQV 12 9 + 68.272 0.0 0.0 5.5026 5.5026 73.5 0.0 0.0 0.0 1.835164253915096 16.61181443446619 1.835164253915096 1.835164253915096 0 1.4361818737241734 1.154901959985743 0.0 0.0 [VS][R{I|L}]D{I|L}GA{I|L}AQV;[QA]KKD{I|L}GA{I|L}AQV;[VS][R{I|L}]D{I|L}Q{I|L}AQV;[PS]{M(Oxidation (M))|F}A[KP]{I|L}A{I|L}AQV;{[TV]|[{I|L}S]}MA[KP]{I|L}A{I|L}AQV;[QA]KKD{I|L}Q{I|L}AQV;[VG]A{M(Oxidation (M))|F}[VP]{I|L}GA{I|L}AQV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[VP]{I|L}GA{I|L}AQV;[{M(Oxidation (M))|F}V]Q[VP]{I|L}GA{I|L}AQV;[VS][R{I|L}]DG{I|L}A{I|L}AQV 5.5026;5.3547;5.2124;5.1562;5.125;5.0645;4.9727;4.9613;4.9048;4.8755 -;-;-;-;-;-;-;-;-;- 5241 1 1.032 161214.0 1.0 10813 4932 15737 HBL1_DMSO_200M_050219_2,15747 HBL1_DMSO_200M_050219_2,15747,VSLSKVEPRNI False False SVIRDIGAIAQV 82.831545 621.36339110136 2755036.0 15737.0 ENSG00000092964|ENST00000521913|DPYSL2;;nc|ENSG00000092964|Q16555-2|DPYSL2;;nc|ENSG00000092964|Q16555|DPYSL2;;ENST00000521983.1_1_8:26484742-26500445:+|nuORF 6.2959849039713545 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15748 82.836 208.0 477570.0 25 0 122450.0 -1 0 74 972.5276047672908 1943.0406566013808 2 972.5290405154228 MULTI CID FTMS 0 0 0 15737 281941.6875 0.9535239542649272 -1 0.1345748901367187 11 4 [{I|L}P]ACAE{I|L}QVV 10 -1 50.672 0.0 0.0 2.6079 0.0 0.0 0.0 916.4781315371814 916.4781315371814 30.801981352645807 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.6549471895720985 0.3054621874040891 [{I|L}P]ACAE{I|L}QVV 2.6079 - 4647 1 1.032 70333.2 1.0 10814 4932 15737 HBL1_DMSO_200M_050219_2,15748 HBL1_DMSO_200M_050219_2,15748, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15749 82.846 599.0 457070.0 25 0 54664.0 + -1 YLLASFSCFPD 11 154 660.3031478760206 1318.591742818841 2 660.3057128787041 MULTI CID FTMS 0 0 0 15737 271049.09375 0.3388407245596513 -2 0.1961517333984375 12 Carbamidomethyl (C) _YLLASFSC(Carbamidomethyl (C))FPD_ REV__ENST00000367261.7_1_1:202894243-202896259:-|nuORF 36.12702656103203 0.2720571796884491 4 Y{I|L}{I|L}ERQY 7 -1 70.402 0.0 0.0 5.3392 0.0 0.0 0.0 350.0852450006469 350.0852450006469 48.948405747234304 0.0 0.0 0.0 0 1.9991348669726232 2.0 0.9247425010840048 0.5 Y{I|L}{I|L}ERQY 5.3392 - 3255 + 1 1.032 199258.4 1.0 10815 4932 15737 HBL1_DMSO_200M_050219_2,15749 HBL1_DMSO_200M_050219_2,15749,YLLASFSCFPD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15750 82.858 706.0 226560.0 25 0 31879.0 1591 ALLGKLDAI 9 164 457.2893073128319 912.5640616924636 2 457.2897521853447 MULTI CID FTMS 0 0 0 15737 248836.375 0.3420639330983362 1 -0.14581298828125 13 Unmodified _ALLGKLDAI_ ENSG00000137955|ENST00000319942|RABGGTB 52.268347100219714 0.0353964759249114 4 {I|L}AD{I|L}{I|L}QK{I|L} 8 6 + 87.57 0.0 0.0 9.596 9.596 88.557 0.0 0.0 0.0 61.13255235447778 12.91493055190324 12.91493055190324 4.771212547196626 0 1.075257498915995 2.0 0.0 0.6462566630072955 {I|L}AD{I|L}{I|L}QK{I|L};{I|L}A{I|L}D{I|L}QK{I|L};{I|L}AD{I|L}{I|L}[AG]K{I|L};{I|L}A{I|L}D{I|L}[AG]K{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}QK{I|L};{I|L}AD{I|L}{I|L}[KG]A{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}[AG]K{I|L};{I|L}A{I|L}D{I|L}[KG]A{I|L};{I|L}AD{I|L}[KQ]{I|L}{I|L};{I|L}A{I|L}D[KQ]{I|L}{I|L} 9.596;9.0732;8.5811;8.0582;7.795;7.1971;6.7801;6.6743;6.5032;5.9804 -;-;-;-;-;-;-;-;-;- 1669 + 1 1.032 128254.1 1.0 10816 4932 15737 HBL1_DMSO_200M_050219_2,15750 HBL1_DMSO_200M_050219_2,15750,ALLGKLDAI True True DALLIQKL 82.858274 457.289752185345 10635460.0 15737.0 ENSG00000183530|ENST00000327423|PRR14L 3.4103260040283203 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15751 82.87 618.0 239640.0 25 0 20622.0 + 2234 AQDFRVLYV 9 161 555.8007021402369 1109.5868513472738 2 555.8013183474541 MULTI CID FTMS 0 0 0 15737 232641.234375 1.0 0 0.0 14 Unmodified _AQDFRVLYV_ ENSG00000108963|ENST00000263083|DPH1;ENST00000572819.6_1_17:1939773-1940251:+|nuORF;ENST00000576129.5_1_17:1936818-1940251:+|nuORF;nc|ENSG00000108963|Q9BZG8-1|DPH1;nc|ENSG00000108963|Q9BZG8-2|DPH1 70.33199760932243 0.0209706178985989 4 [QA]D{M(Oxidation (M))|F}RV{I|L}YV 9 0 + 76.1 0.0 0.0 6.8584 6.8584 92.798 0.0 0.0 0.0 17.46238347725445 52.722530043070805 17.46238347725445 21.992546259764936 0 1.9731975075880328 0.4685210829577448 0.2887254899964357 1.2931576817365436 + + [QA]D{M(Oxidation (M))|F}RV{I|L}YV;[R{M(Oxidation (M))|F}]D[QA]V{I|L}YV;{[QD]|[EN]|[WG]|[KD]|[RS]}A{M(Oxidation (M))|F}RV{I|L}YV;[R{M(Oxidation (M))|F}]V{I|L}DQAYV;[{I|L}T]TC[QA]V{I|L}YV;{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}[QA]V{I|L}YV;{[TV]|[{I|L}S]}{[SA]|[TG]}CRV{I|L}YV;[R{M(Oxidation (M))|F}]D[{I|L}V]QAYV;{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}T][QA]V{I|L}YV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS][QA]V{I|L}YV 6.8584;4.8763;4.6468;4.3382;4.2758;3.9918;3.9395;3.8886;3.814;3.7205 +;-;-;-;-;-;-;-;-;- + 1863 1 1.032 118289.8 1.0 10817 4932 15737 HBL1_DMSO_200M_050219_2,15751 HBL1_DMSO_200M_050219_2,15751,AQDFRVLYV True True AQDFRVLYV 82.870249 555.801318347454 2454261.0 15737.0 nc|ENSG00000108963|Q9BZG8-1|DPH1;;nc|ENSG00000108963|Q9BZG8-2|DPH1;;ENSG00000108963|ENST00000263083|DPH1;;ENST00000576129.5_1_17:1936818-1940251:+|nuORF;;ENST00000572819.6_1_17:1939773-1940251:+|nuORF 7.640030066172282 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15752 82.876 340.0 309340.0 25 0 26192.0 + 27815 PLPTEQQN 8 142 309.49051870186247 925.4497267057876 3 309.4902831912041 MULTI CID FTMS 0 0 0 15737 225641.765625 0.5856390956587415 21 -2.341796875 15 Unmodified _PLPTEQQN_ REV__ENSG00000141084|ENST00000317506|RANBP10;REV__ENST00000602525.5_1_16:67765330-67840439:-|nuORF;REV__nc|ENSG00000141084|Q6VN20-3|RANBP10 8.593279151180031 0.7721714526254883 4 {I|L} 1 -1 13.495 0.0 0.0 1.4582 0.0 0.0 794.3544946274656 0.0 794.3544946274656 0.0 0.0514997831990626 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4582 + + 135 + 1 1.032 86653.9 1.0 10818 4932 15737 HBL1_DMSO_200M_050219_2,15752 HBL1_DMSO_200M_050219_2,15752,PLPTEQQN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15753 82.889 709.0 265910.0 25 0 54129.0 + 10470 FTIRDLQRL 9 146 581.3410801840282 1160.6676074348563 2 581.3416625857353 MULTI CID FTMS 0 0 0 15737 216547.78125 1.0 0 0.0 16 Unmodified _FTIRDLQRL_ ENSG00000149262|ENST00000534064|INTS4;ENST00000533180.1_1_11:77612465-77632469:-|nuORF 35.079672537005266 0.1024668437275948 4 D{I|L}QR{I|L} 5 4 50.037 0.0 0.0 4.3111 0.0 0.0 517.3016834943375 0.0 517.3016834943375 0.0 38.047444008242906 0.0 0.0 0 2.048455006504028 0.0 0.0 0.0 + D{I|L}QR{I|L} 4.3111 + + 456 1 1.032 144064.6 1.0 10819 4932 15737 HBL1_DMSO_200M_050219_2,15753 HBL1_DMSO_200M_050219_2,15753,FTIRDLQRL True True FTIRDLQRL 82.888718 581.3414 5205862.25 15737.0 ENSG00000149262|ENST00000534064|INTS4;;ENST00000533180.1_1_11:77612465-77632469:-|nuORF 5.329347292582194 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15754 82.902 771.0 422250.0 25 0 46275.0 + 35086 SQVEIKLSL 9 215 508.8030481023596 1015.5915432715192 2 508.8027831912041 MULTI CID FTMS 0 0 0 15737 192289.109375 0.4420645084627503 -2 0.1961517333984375 17 Unmodified _SQVEIKLSL_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 125.0377797344192 0.0019632425973841 4 {[QS]|[NT]}VE{I|L}K{I|L}{I|L}S 9 2 + 69.152 0.0 0.0 6.8091 6.8091 89.956 0.0 0.0 0.0 8.494325246351423 18.669004577610657 8.494325246351423 9.83714859925957 0 2.4291746928241125 0.9208187539523752 0.7416440611282626 0.9361818737241734 {[QS]|[NT]}VE{I|L}K{I|L}{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}SQ{I|L}S;[K{I|L}]E{I|L}VSQ{I|L}S;{[QN]|[E{I|L}]|[KN]}K{I|L}VSQ{I|L}S;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}{I|L}VSQ{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}TN{I|L}S;[K{I|L}]E{I|L}VTN{I|L}S;[K{I|L}]EV{I|L}SQ{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}S{I|L}QS;{[QN]|[E{I|L}]|[KN]}K{I|L}VTN{I|L}S 6.8091;5.8404;5.8011;5.6681;5.4549;5.3828;5.3435;5.2836;5.2389;5.2104 -;-;-;-;-;-;-;-;-;- 10734 1 1.032 248680.5 1.0 10820 4932 15737 HBL1_DMSO_200M_050219_2,15754 HBL1_DMSO_200M_050219_2,15754,SQVEIKLSL True True SQVEIKLSL 82.902051 508.802783191204 3013350.25 15737.0 ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;nc|ENSG00000177731|Q13045-2|FLII;;nc|ENSG00000177731|Q13045-3|FLII 4.569611072540283 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15755 82.917 792.0 176490.0 25 0 11400.0 14344 IESDKIVE 8 123 932.4895980198067 931.4823215532068 1 933.4940673708916 MULTI CID FTMS 0 0 0 15737 187986.234375 0.3983648560841311 2 -0.188568115234375 18 Unmodified _IESDKIVE_ ENSG00000180543|ENST00000322128|TSPYL5 28.486842064014134 0.4448922141344407 4 {NN|[MP]|[D{I|L}]|[EV]}PMV{I|L}{M(Oxidation (M))|F} 7 6 25.398 0.0 0.0 2.7266 0.0 0.0 0.0 113.05187667597832 113.05187667597832 4.896326570225295 0.0 0.0 0.0 0 0.2614393726401688 0.958607314841775 1.0044321917401078 0.0 {NN|[MP]|[D{I|L}]|[EV]}PMV{I|L}{M(Oxidation (M))|F} 2.7266 - 2144 1 1.032 89966.9 1.0 10821 4932 15737 HBL1_DMSO_200M_050219_2,15755 HBL1_DMSO_200M_050219_2,15755,IESDKIVE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15756 82.921 198.0 359930.0 25 0 64108.0 + 12028 GQAEPESVLLV 11 117 571.308876362331 1140.603199791462 2 571.3083373904228 MULTI CID FTMS 0 0 0 15737 150517.96875 0.1865490272567646 -4 0.4498214721679687 19 Unmodified _GQAEPESVLLV_ ENSG00000127054|ENST00000435064|INTS11;ENST00000461514.6_1_1:1248044-1249114:-|nuORF;ENST00000470030.6_1_1:1247241-1248711:-|nuORF;ENST00000478641.5_1_1:1248044-1248711:-|nuORF;ENST00000485710.5_1_1:1247522-1249186:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 61.60191391372663 0.0626439052904852 4 [EP]SV{I|L}{I|L} 6 5 28.549 0.0 0.0 2.503 0.0 0.0 0.0 499.215967696012 499.215967696012 1.1794761191388403 0.0 0.0 0.0 0 0.0 0.0 1.066901560044258 0.0 + [EP]SV{I|L}{I|L} 2.503 + + 514 1 1.032 59307.1 1.0 10822 4932 15737 HBL1_DMSO_200M_050219_2,15756 HBL1_DMSO_200M_050219_2,15756,GQAEPESVLLV True True GQAEPESVLLV 82.920738 571.308337390423 21332510.0 15737.0 nc|ENSG00000127054|Q5TA45-4|INTS11;;ENSG00000127054|ENST00000435064|INTS11;;nc|ENSG00000127054|Q5TA45-2|INTS11;;nc|ENSG00000127054|Q5TA45-3|INTS11;;nc|ENSG00000127054|Q5TA45-5|INTS11;;ENST00000461514.6_1_1:1248044-1249114:-|nuORF;;ENST00000478641.5_1_1:1248044-1248711:-|nuORF;;ENST00000485710.5_1_1:1247522-1249186:-|nuORF;;ENST00000470030.6_1_1:1247241-1248711:-|nuORF 7.247981707255046 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15757 82.935 800.0 148320.0 25 0 24361.0 45732 YYGGMPTVVNV 11 165 600.2935042361403 1198.5724555390805 2 600.2937499880791 MULTI CID FTMS 0 0 0 15737 137241.984375 0.8126176810178298 -2 0.1961517333984375 20 Unmodified _YYGGMPTVVNV_ ENSG00000140943|ENST00000343411|MBTPS1 17.11289562659939 0.6791789249425932 4 [{I|L}V]A 3 10 28.952 0.0 0.0 2.4156 0.0 0.0 0.0 912.3593872619898 912.3593872619898 10.059129944860596 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}V]A 2.4156 - 1679 1 1.032 84769.0 1.0 10823 4932 15737 HBL1_DMSO_200M_050219_2,15757 HBL1_DMSO_200M_050219_2,15757,YYGGMPTVVNV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15759 82.939 2.5 15470000.0 25 0 1667500.0 + 22572 LPWTAEQVV 9 71 521.7817312608888 1041.5489095885775 2 521.7828246951103 MULTI CID FTMS 0 0 0 15758 23939626.0 1.0 0 0.0 1 Unmodified _LPWTAEQVV_ ENSG00000175216|ENST00000529230|CKAP5;ENST00000528593.1_1_11:46804822-46806223:-|nuORF;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 70.71552829651908 0.0208223590022201 4 [WP]T{I|L}AEQVV 9 2 + 81.73 0.0 0.0 7.847 7.847 87.211 0.0 0.0 0.0 10.567657157894104 11.0827208845118 10.567657157894104 5.580371765640422 0 0.8935078169319297 1.154901959985743 1.9361818737241727 0.0 [WP]T{I|L}AEQVV;[WP]TA{I|L}EQVV;[WP]{I|L}TAEQVV;[WP]T{I|L}AE[AG]VV;[{I|L}P]WTAEQVV;[WP]TAE{I|L}QVV;[WP]TA{I|L}E[AG]VV;[WP]{I|L}TAE[AG]VV;[WP]T{I|L}AEN[{I|L}V];[{I|L}P]WTAE[AG]VV 7.847;7.3112;6.9811;6.9629;6.8324;6.6567;6.4271;6.097;6.0033;5.9483 -;-;-;-;+;-;-;-;-;- + 659 1 1.031 40017.6 1.0 10824 4933 15758 HBL1_DMSO_200M_050219_2,15759 HBL1_DMSO_200M_050219_2,15759,LPWTAEQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15760 82.94 12.0 4290700.0 25 0 532380.0 + 4618 DAYTVLTRI 9 73 526.2925371206958 1050.5705213081917 2 526.2928344607353 MULTI CID FTMS 0 0 0 15758 2490995.75 0.1142136256950376 2 -0.2484893798828125 2 Unmodified _DAYTVLTRI_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 33.4449034751529 0.1114409586740657 4 {[DA]|[EG]}YTV{I|L}T[R{I|L}] 9 0 + 58.923 0.0 0.0 5.6087 5.6087 76.048 0.0 0.0 0.0 29.9785615825148 5.999161495794425 5.999161495794425 3.0102999566398125 0 1.110924374808178 1.3979400086720375 0.0 0.2742275032520141 + + {[DA]|[EG]}YTV{I|L}T[R{I|L}];{[DA]|[EG]}YT{I|L}VT[R{I|L}] 5.6087;5.3222 +;- + 115 + 1 1.031 42864.0 1.0 10825 4933 15758 HBL1_DMSO_200M_050219_2,15760 HBL1_DMSO_200M_050219_2,15760,DAYTVLTRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15761 82.941 7.1 6524000.0 25 0 938430.0 + 1268 AIMPSALAL 9 67 451.75274496202985 901.4909369908596 2 451.7538940310478 MULTI CID FTMS 0 0 0 15758 7176831.5 0.5525985794102495 18 -1.9962310791015625 3 Oxidation (M) _AIM(Oxidation (M))PSALAL_ REV__ENSG00000196531|ENST00000454682|NACA;REV__nc|ENSG00000196531|E9PAV3-2|NACA 44.40701690623563 0.0526327925666318 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 70.869 0.0 0.0 7.8613 7.8613 94.697 0.0 0.0 0.0 24.76203644159419 54.67084689121528 24.76203644159419 16.581531501239297 0 0.5 2.0 0.3807196863200844 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}PAA{I|L}S{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A][WE]A{I|L}S{I|L};[{I|L}A]{M(Oxidation (M))|F}[QT][{I|L}P]{I|L};[PS]{M(Oxidation (M))|F}PAA{I|L}S{I|L};[PS]{M(Oxidation (M))|F}[QT][{I|L}P]{I|L};{[SA]|[TG]}[RN][WR]{I|L} 7.8613;6.0219;5.9259;5.3966;4.7542;4.0866;3.8961;2.9148;0.78903;0.6951 -;-;-;-;-;-;-;-;-;- 145 1 1.031 43043.4 1.0 10826 4933 15758 HBL1_DMSO_200M_050219_2,15761 HBL1_DMSO_200M_050219_2,15761,AIMPSALAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15762 82.942 14.0 4655000.0 25 0 813210.0 + 12577 GVIEKLLTS 9 84 480.2925924658701 958.5706319985402 2 480.2925598025322 MULTI CID FTMS 0 0 0 15758 3876895.0 0.8993874395530084 1 -0.042755126953125 4 Unmodified _GVIEKLLTS_ ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 57.72198328787511 0.0273433238377839 4 [VG]{I|L}T{I|L}{I|L}[VG]TS 10 4 + 65.635 0.0 0.0 6.8472 6.8472 76.567 0.0 0.0 0.0 13.327731244245342 14.484615597275408 13.327731244245342 0.7268250975604218 0 1.774227503252014 2.0 0.4247425010840047 0.0 [VG]{I|L}T{I|L}{I|L}[VG]TS;[VG]{I|L}T{I|L}[VG]{I|L}TS;[VG]{I|L}E{I|L}K{I|L}TS;[VG]T{I|L}{I|L}{I|L}[VG]TS;[VG]T{I|L}{I|L}[VG]{I|L}TS;{[QN]|[E{I|L}]|[KN]}K{I|L}{I|L}[VG]TS;{[QN]|[E{I|L}]|[KN]}K{I|L}[VG]{I|L}TS;{[QN]|[E{I|L}]|[KN]}[VG]{I|L}K{I|L}TS;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}{I|L}[VG]TS;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}[VG]{I|L}TS 6.8472;6.7713;6.5835;6.2497;6.1739;4.9388;4.863;3.7146;3.2743;3.1984 -;-;-;-;-;-;-;-;-;- 632 1 1.031 56396.2 1.0 10827 4933 15758 HBL1_DMSO_200M_050219_2,15762 HBL1_DMSO_200M_050219_2,15762,GVIEKLLTS True True GVIEKLLTS 82.942425 480.292559802532 98118848.0 15758.0 nc|ENSG00000009307|O75534-2|CSDE1;;nc|ENSG00000009307|O75534-3|CSDE1;;nc|ENSG00000009307|O75534-4|CSDE1;;ENSG00000009307|ENST00000358528|CSDE1 6.686015605926514 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15763 82.944 18.0 5146500.0 25 0 1162500.0 + -1 VVEAVEAGDAIAL 13 84 629.3864572314849 628.3791807648848 1 629.3862792849541 MULTI CID FTMS 0 0 0 15758 3853940.5 0.1996113836804453 -2 0.2803878784179687 5 ENSG00000214194|ENST00000397764|SMIM30 4 {NN|[MP]|[D{I|L}]|[EV]}VVA{I|L} 6 -1 + 69.556 0.0 0.0 11.069 11.069 88.412 0.0 0.0 0.0 17.349297205885257 16.197887582883936 16.197887582883936 4.338997249245452 0 1.2856668758921828 1.5228787452803376 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}VVA{I|L};{NN|[MP]|[D{I|L}]|[EV]}VAV{I|L};{NN|[MP]|[D{I|L}]|[EV]}VG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}AVV{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{I|L}V{I|L};{[VA]|[{I|L}G]}EVV{I|L};{[VA]|[{I|L}G]}D{I|L}V{I|L};VVEVA{I|L};{[VA]|[{I|L}G]}VEV{I|L};{NN|[MP]|[D{I|L}]|[EV]}GV{I|L}{I|L} 11.069;10.379;9.4392;8.7446;8.5904;8.3082;8.154;8.0891;7.8292;7.651 -;-;-;-;-;-;-;-;-;- 193 1 1.031 72594.9 1.0 10828 4933 15758 HBL1_DMSO_200M_050219_2,15763 HBL1_DMSO_200M_050219_2,15763, False False VVEAVEAGDAIAL 82.943604 629.386279284954 26954696.0 15758.0 ENSG00000214194|ENST00000397764|SMIM30 1.7748762170473735 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15764 82.945 17.0 3198500.0 25 0 508260.0 + 44983 YPRQLESLI 9 77 559.8143770313816 1117.614201129563 2 559.8141967654228 MULTI CID FTMS 0 0 0 15758 2769226.25 0.5380648831082027 -2 0.2803878784179687 6 Unmodified _YPRQLESLI_ ENSG00000104738|ENST00000649973|MCM4 27.628801355627647 0.1796483985696185 4 Q{I|L}ES{I|L}{I|L} 6 3 48.805 0.0 0.0 4.3669 0.0 0.0 416.21785170722814 0.0 416.21785170722814 0.0 28.35979084976365 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 + Q{I|L}ES{I|L}{I|L} 4.3669 + + 186 1 1.031 47024.9 1.0 10829 4933 15758 HBL1_DMSO_200M_050219_2,15764 HBL1_DMSO_200M_050219_2,15764,YPRQLESLI False True YPRQLESLI 82.944784 559.814196765423 61506316.0 15758.0 ENSG00000104738|ENST00000649973|MCM4 5.075913429260254 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15765 82.946 23.0 2850800.0 25 0 314620.0 + 15273 IPHPLIMGV 9 73 488.785984473826 975.557416014452 2 488.7863036990166 MULTI CID FTMS 0 0 0 15758 2718940.25 0.7992530685128378 1 -0.042755126953125 7 Unmodified _IPHPLIMGV_ ENSG00000166200|ENST00000388901|COPS2;ENST00000559016.1_1_15:49426483-49429634:-|nuORF;nc|ENSG00000166200|P61201-2|COPS2 67.41302359171755 0.0220989861905124 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}P{I|L}MGV 9 3 + 65.724 0.0 0.0 6.737 6.737 78.42 0.0 0.0 0.0 1.9133185204407963 6.478174818886373 1.9133185204407963 1.9133185204407963 0 0.4247425010840047 0.0 0.6861818737241735 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}P{I|L}MGV;[{I|L}P]H{I|L}P{I|L}MGV;[{I|L}P]HP{I|L}{I|L}MGV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}P{I|L}{I|L}MGV;[{I|L}P]{I|L}HP{I|L}MGV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}PM{I|L}GV;[{I|L}P]H{I|L}PM{I|L}GV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}PMG{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}MP{I|L}GV;[{I|L}P]HP{I|L}M{I|L}GV 6.737;6.5409;6.2323;6.1153;5.9238;5.8126;5.6164;5.504;5.504;5.3079 -;-;+;-;-;-;-;-;-;- + 484 1 1.031 57596.0 1.0 10830 4933 15758 HBL1_DMSO_200M_050219_2,15765 HBL1_DMSO_200M_050219_2,15765,IPHPLIMGV True True IPHPLIMGV 82.945963 488.786303699017 62485256.0 15758.0 ENST00000559016.1_1_15:49426483-49429634:-|nuORF;;nc|ENSG00000166200|P61201-2|COPS2;;ENSG00000166200|ENST00000388901|COPS2 8.458832422892252 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15766 82.947 19.0 4093900.0 25 0 691100.0 + 9920 FPFYGKPMRI 10 62 419.2266078236951 1254.6579940712852 3 419.2267944216728 MULTI CID FTMS 0 0 0 15758 2642898.0 0.5377299899194625 5 -0.4598541259765625 8 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 32.78568957990786 0.2337485590374503 4 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 67.612 0.0 0.0 5.3889 0.0 0.0 119.07409102607578 0.0 119.07409102607578 0.0 45.39381281052492 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.3889 - 332 1 1.031 67756.6 1.0 10831 4933 15758 HBL1_DMSO_200M_050219_2,15766 HBL1_DMSO_200M_050219_2,15766,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15767 82.948 23.0 3026100.0 25 0 381490.0 + 14404 IFIDRDPTVF 10 67 611.8276490793759 1221.6407452255517 2 611.8273803591728 MULTI CID FTMS 0 0 0 15758 1811741.5 1.0 0 0.0 9 Unmodified _IFIDRDPTVF_ ENSG00000160410|ENST00000291842|SHKBP1;ENST00000595523.5_1_19:41083305-41084039:+|nuORF;ENST00000598558.5_1_19:41083239-41086365:+|nuORF;ENST00000600552.5_1_19:41083005-41084032:+|nuORF;nc|ENSG00000160410|Q8TBC3-2|SHKBP1 55.23464941255904 0.0494277333541689 4 S{M(Oxidation (M))|F}{I|L}V{M(Oxidation (M))|F} 5 6 43.448 0.0 0.0 3.5566 0.0 0.0 610.3134632794937 0.0 610.3134632794937 0.0 5.273109370204452 0.0 0.0 0 0.805462187404089 0.0 1.274227503252014 0.0 S{M(Oxidation (M))|F}{I|L}V{M(Oxidation (M))|F} 3.5566 - 102 1 1.031 58618.5 1.0 10832 4933 15758 HBL1_DMSO_200M_050219_2,15767 HBL1_DMSO_200M_050219_2,15767,IFIDRDPTVF True True IFIDRDPTVF 82.948319 611.827380359173 19981176.0 15758.0 ENST00000600552.5_1_19:41083005-41084032:+|nuORF;;ENST00000595523.5_1_19:41083305-41084039:+|nuORF;;ENSG00000160410|ENST00000291842|SHKBP1;;nc|ENSG00000160410|Q8TBC3-2|SHKBP1;;ENST00000598558.5_1_19:41083239-41086365:+|nuORF 7.412716229756673 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15768 82.95 32.0 2189400.0 25 0 458520.0 + 10914 GAIPLRVQL 9 79 483.80918040928384 965.6038078853676 2 483.8087341189384 MULTI CID FTMS 0 0 0 15758 1475011.25 0.453266749211802 2 -0.2484893798828125 10 Unmodified _GAIPLRVQL_ REV__ENST00000329565.5_1_16:11770277-11770403:+|nuORF 42.09456458481378 0.0639583784996157 4 Q{I|L}Q{I|L} 4 -1 24.897 0.0 0.0 2.5784 0.0 0.0 465.3070851056656 0.0 465.3070851056656 0.0 6.385255949817786 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 Q{I|L}Q{I|L} 2.5784 - 153 1 1.031 57123.0 1.0 10833 4933 15758 HBL1_DMSO_200M_050219_2,15768 HBL1_DMSO_200M_050219_2,15768,GAIPLRVQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15769 82.951 29.0 2316900.0 25 0 227510.0 + 44692 YPFKPPMI 8 81 496.7675405711997 991.5205282091994 2 496.7673217654228 MULTI CID FTMS 0 0 0 15758 1350174.625 0.1811871571560409 -3 0.3419647216796875 11 Unmodified _YPFKPPMI_ ENSG00000156587|ENST00000287156|UBE2L6 42.96799951952854 0.1846367511955703 4 YP{M(Oxidation (M))|F}KPPM{I|L} 8 0 + 65.571 0.0 0.0 6.6132 6.6132 92.058 0.0 0.0 0.0 40.521694116643374 13.27623146104628 13.27623146104628 23.750612633917 0 0.4247425010840047 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPM{I|L};YPVM{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};YP{M(Oxidation (M))|F}[W{I|L}][PG]{I|L};YP{M(Oxidation (M))|F}[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};YPVM{I|L}[RD]V;YP{M(Oxidation (M))|F}[W{I|L}][PA]V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPYV{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}MV{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K[VP]{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6.6132;4.2178;4.1431;4.0171;3.8924;3.2395;3.1648;2.382;2.3795;2.1789 +;-;-;-;-;-;-;-;-;- + 221 + 1 1.031 54596.4 1.0 10834 4933 15758 HBL1_DMSO_200M_050219_2,15769 HBL1_DMSO_200M_050219_2,15769,YPFKPPMI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15770 82.952 39.0 1278300.0 25 0 86371.0 + 45673 YVTEELPQL 9 83 546.2835025216945 1090.5524521101888 2 546.2842285037041 MULTI CID FTMS 0 0 0 15758 1052214.0 0.7095104968665165 1 -0.042755126953125 12 Unmodified _YVTEELPQL_ ENSG00000139684|ENST00000378720|ESD 70.71552829651908 0.0208223590022201 4 {[ET]|[MV]}E{I|L}M{I|L}K{NN|[MP]|[D{I|L}]|[EV]} 9 6 + 35.217 0.0 0.0 3.2293 3.2293 61.883 0.0 0.0 0.0 0.1572421793269782 1.1275675772415426 0.1572421793269782 0.1572421793269782 0 0.0 0.0 0.7134679910804405 0.0 {[ET]|[MV]}E{I|L}M{I|L}K{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}ETM{I|L}K{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]K{I|L}[C(Carbamidomethyl (C))S]PQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}YVE[DP];[YV]T[HC]{I|L}K{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}PDYVK{NN|[MP]|[D{I|L}]|[EV]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}EETM{I|L};[YV][DP]E{I|L}K{NN|[MP]|[D{I|L}]|[EV]};{[ET]|[MV]}NKM{I|L}K{NN|[MP]|[D{I|L}]|[EV]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}YS[HC]{I|L} 3.2293;3.2148;3.1259;2.9742;2.9697;2.9399;2.7861;2.6007;2.4851;2.23 -;-;-;-;-;-;-;-;-;- 400 1 1.031 44550.1 1.0 10835 4933 15758 HBL1_DMSO_200M_050219_2,15770 HBL1_DMSO_200M_050219_2,15770,YVTEELPQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15771 82.953 55.0 1217600.0 25 0 146260.0 + 45037 YPWGTVQV 8 94 475.2427640821656 948.4709752311312 2 475.2429382205009 MULTI CID FTMS 0 0 0 15758 927114.5625 0.3111304881779151 -3 0.3419647216796875 13 Unmodified _YPWGTVQV_ ENSG00000125354|ENST00000394610|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6 52.69307289633392 0.1265801145616722 4 [WP]GTYVQV 8 2 + 60.056 0.0 0.0 6.3319 6.3319 80.633 0.0 0.0 0.0 19.20818753952375 37.60895442975783 19.20818753952375 3.979400086720375 0 0.4645069810232298 1.2218487496163564 1.3807196863200843 0.0 [WP]GTYVQV;[WP]GTVYQV;[WP]GYTVQV;[AG]{[ES]|[DT]|[{I|L}C]}PYVQV;[AG]{[ES]|[DT]|[{I|L}C]}PVYQV;[{I|L}A]C(Carbamidomethyl (C))PYVQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QD]|[EN]|[WG]|[KD]|[RS]}TVQV;[{I|L}A]C(Carbamidomethyl (C))PVYQV;{[QV]|[N{I|L}]|[RA]|[KV]}[{M(Oxidation (M))|F}E]TVQV;[{I|L}A][CG]PYVQV 6.3319;5.9123;5.8047;4.2176;3.798;3.0941;3.0472;2.6746;2.2222;2.1176 -;-;-;-;-;-;+;-;-;- + 174 1 1.031 57772.4 1.0 10836 4933 15758 HBL1_DMSO_200M_050219_2,15771 HBL1_DMSO_200M_050219_2,15771,YPWGTVQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15772 82.955 50.0 974750.0 25 0 90831.0 882 AEVGTVVLVLS 11 95 543.8243154254932 1085.6340779177865 2 543.8243896365166 MULTI CID FTMS 0 0 0 15758 822625.6875 0.677855635719594 1 -0.042755126953125 14 Unmodified _AEVGTVVLVLS_ ENSG00000197410|ENST00000357232|DCHS2 39.94969957227396 0.2131707853268865 4 {[TV]|[{I|L}S]}{I|L}VWG{I|L} 7 7 42.528 0.0 0.0 3.9174 0.0 0.0 0.0 314.17275780739595 314.17275780739595 21.637663434659583 0.0 0.0 0.0 0 0.5 1.2218487496163564 1.110924374808178 0.0 {[TV]|[{I|L}S]}{I|L}VWG{I|L} 3.9174 - 469 1 1.031 47263.8 1.0 10837 4933 15758 HBL1_DMSO_200M_050219_2,15772 HBL1_DMSO_200M_050219_2,15772,AEVGTVVLVLS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15773 82.956 70.0 886820.0 25 0 106890.0 -1 0 60 915.4418501566036 1828.869147380007 2 915.443896472454 MULTI CID FTMS 0 0 0 15758 665986.8125 0.5891136649212576 1 -0.042755126953125 15 4 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 108.77 0.0 0.0 5.9474 5.9474 56.5 0.0 0.0 0.0 12.21848749616356 16.663092650152223 12.21848749616356 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQGGA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]NA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQGGA{M(Oxidation (M))|F}YQV{I|L};[YQ]VEEAQQNA{M(Oxidation (M))|F}YKV{I|L} 5.9474;5.9474;5.4536;5.4536;5.4536;5.4536;5.4536;5.4536;5.4536;5.2794 -;-;-;-;-;-;-;-;-;- 2442 1 1.031 48057.7 1.0 10838 4933 15758 HBL1_DMSO_200M_050219_2,15773 HBL1_DMSO_200M_050219_2,15773, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15774 82.959 128.0 718620.0 25 0 126780.0 + 15568 IPYHIVNIV 9 132 534.315955407261 1066.6173578813218 2 534.3159057497978 MULTI CID FTMS 0 0 0 15758 538905.25 0.0136606343643762 6 -0.5365524291992188 16 Unmodified _IPYHIVNIV_ ENSG00000031698|ENST00000234677|SARS1 49.66892048692302 0.0410958345688192 4 {[QV]|[N{I|L}]|[RA]|[KV]}[WP]VN{I|L}{I|L}V 9 5 + 64.125 0.0 0.0 6.012 6.012 77.109 0.0 0.0 0.0 10.28028723600243 16.478174818886366 10.28028723600243 2.887254899964347 0 0.4247425010840047 2.0 0.0 0.5774509799928715 {[QV]|[N{I|L}]|[RA]|[KV]}[WP]VN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]{I|L}VN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}V[WP]N{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]V{I|L}N{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}V{[WN]|[YH]}P{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[WP]VGG{I|L}{I|L}V;{[WN]|[YH]}P{I|L}VN{I|L}{I|L}V;[H{I|L}]{M(Oxidation (M))|F}{I|L}VN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}V[WP]{I|L}N{I|L}V;[{I|L}P]{[WN]|[YH]}VN{I|L}{I|L}V 6.012;5.7413;5.5646;5.459;5.1916;5.1487;5.0481;5.0481;5.0117;5.0117 -;-;-;-;-;-;-;-;-;- 1080 1 1.031 81783.9 1.0 10839 4933 15758 HBL1_DMSO_200M_050219_2,15774 HBL1_DMSO_200M_050219_2,15774,IPYHIVNIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15775 82.962 166.0 612900.0 25 0 115580.0 + 16304 IWPNARISVM 10 90 593.8224900911056 1185.630427249011 2 593.8241454958916 MULTI CID FTMS 0 0 0 15758 513232.8125 1.0 0 0.0 17 Unmodified _IWPNARISVM_ ENSG00000131844|ENST00000340941|MCCC2;nc|ENSG00000131844|Q9HCC0-2|MCCC2 32.78568957990786 0.2337485590374503 4 {I|L}WPN 4 6 58.047 0.0 0.0 4.8959 0.0 0.0 0.0 672.3512841786317 672.3512841786317 26.660945503478963 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + {I|L}WPN 4.8959 + + 97 + 1 1.031 80472.3 1.0 10840 4933 15758 HBL1_DMSO_200M_050219_2,15775 HBL1_DMSO_200M_050219_2,15775,IWPNARISVM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15776 82.965 110.0 604030.0 25 0 76886.0 22406 LPTAHLLCTM 10 103 550.2841765315527 1098.5538001299053 2 550.2858764529228 MULTI CID FTMS 0 0 0 15758 378695.125 0.6854364707983811 -1 0.14581298828125 18 Unmodified _LPTAHLLCTM_ ENST00000328434.7_1_17:40949831-40949894:-|nuORF 37.97399986684836 0.1789611706409123 4 [{I|L}P]HTA{I|L}{I|L} 7 5 46.091 0.0 0.0 4.1956 0.0 0.0 0.0 350.081409727838 350.081409727838 12.65707609169035 0.0 0.0 0.0 0 1.1382104921644451 1.0 1.2302046884880935 0.0 [{I|L}P]HTA{I|L}{I|L} 4.1956 - 393 1 1.031 56413.0 1.0 10841 4933 15758 HBL1_DMSO_200M_050219_2,15776 HBL1_DMSO_200M_050219_2,15776,LPTAHLLCTM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15777 82.975 570.0 289130.0 25 0 14854.0 -1 0 138 881.9067130267736 1761.798873120347 2 881.9063598513603 MULTI CID FTMS 0 0 0 15758 350114.90625 0.1837209283257825 2 -0.2484893798828125 19 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 143.54 0.0 0.0 8.1475 8.1475 85.451 0.0 0.0 0.0 8.354706403678875 16.70941280735775 8.354706403678875 3.6991128507179374 0 1.5629529932484498 1.3979400086720375 1.9436726795685344 1.6976212463643423 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QAQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]AGAQDA{M(Oxidation (M))|F}YQV{I|L};[QA]HDEAGAQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGA[AG]DA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQW{M(Oxidation (M))|F}YQV{I|L};[QA]DHEAGAQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L} 8.1475;7.9376;7.7667;7.6733;7.6619;7.6359;7.6359;7.5256;7.517;7.4634 -;-;-;-;-;-;-;-;-;- 53249 1 1.031 115493.9 1.0 10842 4933 15758 HBL1_DMSO_200M_050219_2,15777 HBL1_DMSO_200M_050219_2,15777, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15778 82.977 139.0 1208900.0 25 0 197590.0 + 4652 DAYVLPKLY 9 126 541.3001215762505 1080.585690219301 2 541.3004638552666 MULTI CID FTMS 0 0 0 15758 302582.34375 0.0021141551051873 -4 0.4738922119140625 20 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 52.268347100219714 0.0353964759249114 4 {[DA]|[EG]}YV{I|L}PKY{I|L} 9 2 + 66.916 0.0 0.0 6.1926 6.1926 75.361 0.0 0.0 0.0 19.973024840566467 1.4612803567823818 1.4612803567823818 1.4612803567823818 0 1.2302046884880935 1.6989700043360187 0.0 0.0 {[DA]|[EG]}YV{I|L}PKY{I|L};{[DA]|[EG]}YV{I|L}PK{I|L}Y 6.1926;6.0574 -;+ + 318 + 1 1.031 133822.4 1.0 10843 4933 15758 HBL1_DMSO_200M_050219_2,15778 HBL1_DMSO_200M_050219_2,15778,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15780 82.982 39.0 1172000.0 25 0 173940.0 -1 0 53 670.6724048917235 2008.9953852753704 3 671.0074340701103 MULTI CID FTMS 0 0 0 15779 1405096.125 1.0 0 0.0 1 4 G{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]} 8 -1 49.201 0.0 0.0 2.449 0.0 0.0 1095.4935676497994 0.0 1095.4935676497994 0.0 22.23828478979911 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]} 2.449 - 95 1 1.031 43780.3 1.0 10844 4934 15779 HBL1_DMSO_200M_050219_2,15780 HBL1_DMSO_200M_050219_2,15780, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15781 82.986 232.0 289180.0 25 0 32125.0 + 1270 AINEEFVSI 9 90 511.2640989228069 1020.5136449124138 2 511.2647582888603 MULTI CID FTMS 0 0 0 15779 172724.4375 0.2995937324041228 2 -0.3031387329101562 2 Unmodified _AINEEFVSI_ ENSG00000133103|ENST00000455146|COG6;nc|ENSG00000133103|Q9Y2V7-2|COG6 29.081581746732265 0.1611639662936252 4 [{I|L}A]NEE{M(Oxidation (M))|F}VS{I|L} 9 0 [{I|L}A]NEE{M(Oxidation (M))|F}V + + 21.211 23.689 2.9523 2.0785 2.0785 44.637 0.0 0.0 0.0 0.0 -2.966783634620654 -2.966783634620654 0.0 0 0.0 0.0 0.3252574989159953 0.0 + + [{I|L}A]NEE{M(Oxidation (M))|F}VS{I|L} 2.0785 + + 243 + 1 1.031 56582.3 1.0 10845 4934 15779 HBL1_DMSO_200M_050219_2,15781 HBL1_DMSO_200M_050219_2,15781,AINEEFVSI False True AINEEFVSI 82.986 511.26475828886 4394845.5 15779.0 ENSG00000133103|ENST00000455146|COG6;;nc|ENSG00000133103|Q9Y2V7-2|COG6 2.070249100526174 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15782 82.987 23.0 2712800.0 25 0 299790.0 + 27093 PFFSIKNL 8 81 483.2765192074866 964.5384854817733 2 483.2766601443291 MULTI CID FTMS 0 0 0 15779 1799319.0 0.2496637283074579 -9 0.9968338012695312 3 Unmodified _PFFSIKNL_ ENST00000535538.1_1_7:64466492-64466690:-|nuORF 24.67388899826682 0.525179942228231 4 [KG]{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}PE 8 6 + 47.612 0.0 0.0 4.9363 4.9363 75.093 0.0 0.0 0.0 4.164317917986224 4.164317917986224 4.164317917986224 4.164317917986224 0 0.4247425010840047 0.0 0.0 0.0 [KG]{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}PE;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}K{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{M(Oxidation (M))|F}P{M(Oxidation (M))|F}K{[QV]|[N{I|L}]|[RA]|[KV]}TV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;[KG]{M(Oxidation (M))|F}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;[YV]EK{I|L}[WK];[KG]{M(Oxidation (M))|F}P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;[YV]EK{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};[YV]EK[WK]{I|L};{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L} 4.9363;4.5045;4.0743;3.3044;2.5519;2.2816;2.2398;1.6825;1.5569;1.4457 -;-;-;-;-;-;-;-;-;- 194 1 1.031 51545.3 1.0 10846 4934 15779 HBL1_DMSO_200M_050219_2,15782 HBL1_DMSO_200M_050219_2,15782,PFFSIKNL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15783 82.988 34.0 1560300.0 25 0 157980.0 + 24298 MAYPDLNEI 9 100 533.2502681592617 1064.4859833853234 2 533.2504760622978 MULTI CID FTMS 0 0 0 15779 935311.9375 0.0619790402787715 -2 0.188568115234375 4 Unmodified _MAYPDLNEI_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 18.13498045792455 0.3457906370836843 4 NPWVEN{I|L} 7 7 41.446 0.0 0.0 3.8935 0.0 0.0 0.0 209.05719934635 209.05719934635 19.48329514953265 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NPWVEN{I|L} 3.8935 - 496 + 1 1.031 50601.8 1.0 10847 4934 15779 HBL1_DMSO_200M_050219_2,15783 HBL1_DMSO_200M_050219_2,15783,MAYPDLNEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15784 82.991 135.0 740960.0 25 0 173760.0 + -1 TVFTDHMLTV 10 93 581.2920041780851 1160.56945542297 2 582.2921020388603 MULTI CID FTMS 0 0 0 15779 502314.09375 0.04006048810457 -1 0.042755126953125 5 Carbamidomethyl (C) _C(Carbamidomethyl (C))MLSPRTPTV_ nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-5|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;ENSG00000060982|ENST00000261192|BCAT1 18.1463463914782 0.5430639438673815 4 [HD]T{M(Oxidation (M))|F}M{I|L}TVPT 10 -1 + 58.123 0.0 0.0 5.0081 5.0081 75.991 0.0 0.0 0.0 4.259687322722812 21.08436200836145 4.259687322722812 4.559258551040671 0 0.3935078169319297 0.0 1.4802046884880935 0.0 [HD]T{M(Oxidation (M))|F}M{I|L}TVPT;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}TVPT;[HD]TM{M(Oxidation (M))|F}{I|L}TVPT;[HM]DT{M(Oxidation (M))|F}{I|L}TVPT;[HD]MT{M(Oxidation (M))|F}{I|L}TVPT;[HD]T{M(Oxidation (M))|F}M{I|L}S{I|L}PT;[HD]T{M(Oxidation (M))|F}M{I|L}TS[{I|L}P];[HD]T{M(Oxidation (M))|F}P{M(Oxidation (M))|F}TVVV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}T{M(Oxidation (M))|F}VPT;[HD]TM{I|L}{M(Oxidation (M))|F}TVPT 5.0081;4.6153;4.597;4.597;4.3376;4.231;4.0816;3.9777;3.9751;3.9056 -;-;-;-;-;-;-;-;-;- 1681 1 1.031 83109.5 1.0 10848 4934 15779 HBL1_DMSO_200M_050219_2,15784 HBL1_DMSO_200M_050219_2,15784,CMLSPRTPTV False False TVFTDHMLTV 82.991106 582.29210203886 89892696.0 15779.0 nc|ENSG00000060982|P54687-2|BCAT1;;nc|ENSG00000060982|P54687-4|BCAT1;;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;;nc|ENSG00000060982|P54687-5|BCAT1;;nc|ENSG00000060982|P54687-3|BCAT1;;ENSG00000060982|ENST00000261192|BCAT1 6.945628960927327 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15785 83.0 528.0 468880.0 25 0 66090.0 + 35703 SVFWLDTLSYV 11 113 665.338400961775 0 665.3379394412041 PEAK CID FTMS 0 0 0 15779 389961.59375 1.0 0 0.0 6 Unmodified _SVFWLDTLSYV_ REV__ENST00000334534.9_1_20:10579325-10582447:+|nuORF 27.628801355627647 0.2572500445580473 4 Y{I|L}SVTEC[PA]{I|L} 10 -1 65.865 0.0 0.0 4.9572 0.0 0.0 117.07910468014992 132.04586206607658 249.1249667462265 0.0 0.0 0.0 0.0 0 1.1307196863200843 0.0 1.642159058960253 0.0 Y{I|L}SVTEC[PA]{I|L} 4.9572 - 722 + 1 1.031 184784.5 1.0 10849 4934 15779 HBL1_DMSO_200M_050219_2,15785 HBL1_DMSO_200M_050219_2,15785,SVFWLDTLSYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15786 83.01 557.0 412160.0 25 0 16368.0 + 30670 RFPEELTQTF 10 170 634.3192248256998 1266.6238967181996 2 634.3197509646416 MULTI CID FTMS 0 0 0 15779 341249.6875 0.7585759099689053 -1 0.042755126953125 7 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 71.70789743142352 0.0188816056000227 4 {[VA]|[{I|L}G]}A[C(Carbamidomethyl (C))K]E{I|L}TQT{M(Oxidation (M))|F} 11 5 + 88.999 0.0 0.0 7.0264 7.0264 83.984 0.0 0.0 0.0 4.522976709946306 16.575773191777927 4.522976709946306 4.522976709946306 0 1.2887254899964358 1.2218487496163564 1.4876954943324543 0.3054621874040891 {[VA]|[{I|L}G]}A[C(Carbamidomethyl (C))K]E{I|L}TQT{M(Oxidation (M))|F};[AG]{I|L}[C(Carbamidomethyl (C))K]E{I|L}TQT{M(Oxidation (M))|F};[Q{I|L}][C(Carbamidomethyl (C))K]E{I|L}TQT{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};{[VA]|[{I|L}G]}A[C(Carbamidomethyl (C))K]E{I|L}T[AG]T{M(Oxidation (M))|F};{[VA]|[{I|L}G]}A[C(Carbamidomethyl (C))K]T{I|L}EQT{M(Oxidation (M))|F};[AG]{I|L}[C(Carbamidomethyl (C))K]E{I|L}T[AG]T{M(Oxidation (M))|F};[Q{I|L}][C(Carbamidomethyl (C))K]E{I|L}T[AG]T{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}E{I|L}TQT{M(Oxidation (M))|F};[PS]V[{M(Oxidation (M))|F}V]E{I|L}TQT{M(Oxidation (M))|F} 7.0264;6.6694;6.6587;6.4341;6.3057;6.009;5.9487;5.9352;5.8439;5.8079 -;-;-;-;-;-;-;-;-;- 11877 1 1.031 171531.7 1.0 10850 4934 15779 HBL1_DMSO_200M_050219_2,15786 HBL1_DMSO_200M_050219_2,15786,RFPEELTQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15787 83.022 657.0 534920.0 25 0 59278.0 19870 LHMDSDDEI 9 247 537.7244311155969 1073.4343092979937 2 537.7249023318291 MULTI CID FTMS 0 0 0 15779 245088.484375 0.1628404971818417 -2 0.188568115234375 8 Unmodified _LHMDSDDEI_ ENSG00000104218|ENST00000678616|CSPP1;ENST00000521168.5_1_8:68070723-68107652:+|nuORF;nc|ENSG00000104218|Q1MSJ5-1|CSPP1;nc|ENSG00000104218|Q1MSJ5-2|CSPP1;nc|ENSG00000104218|Q1MSJ5|CSPP1 24.67388899826682 0.2172451872415813 4 [H{I|L}]MD{I|L}C{I|L} 7 4 50.105 0.0 0.0 4.6677 0.0 0.0 0.0 245.01961138223115 245.01961138223115 21.385048182882564 0.0 0.0 0.0 0 0.378569643379605 1.5228787452803376 0.8026048219588936 0.0 [H{I|L}]MD{I|L}C{I|L} 4.6677 - 2251 1 1.031 262901.3 1.0 10851 4934 15779 HBL1_DMSO_200M_050219_2,15787 HBL1_DMSO_200M_050219_2,15787,LHMDSDDEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15788 83.035 800.0 309100.0 25 0 29502.0 + 25925 NLLPKLHIV 9 203 349.56251655466576 1045.6657202641973 3 349.5623046755791 MULTI CID FTMS 0 0 0 15779 208925.828125 0.6897674819294759 -1 0.042755126953125 9 Unmodified _NLLPKLHIV_ ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1 36.04419817259434 0.0971720506436186 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V 9 0 + 44.458 0.0 0.0 4.2517 4.2517 79.564 0.0 0.0 0.0 21.95232688922031 8.071968632008442 8.071968632008442 9.542425094393243 0 0.2396518287104437 1.6989700043360187 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}HV{I|L} 4.2517;3.3391 +;- + 381 + 1 1.031 203000.4 0.8700000047683716 10852 4934 15779 HBL1_DMSO_200M_050219_2,15788 HBL1_DMSO_200M_050219_2,15788,NLLPKLHIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15789 83.048 721.0 206940.0 25 0 44872.0 + 17038 KKLMKTFSVTV 11 130 641.3853024487198 1280.7560519642395 2 641.3851806521416 MULTI CID FTMS 0 0 0 15779 192347.859375 0.6958069792414294 -1 0.042755126953125 10 Unmodified _KKLMKTFSVTV_ REV__ENSG00000231192|ENST00000641874|OR5H1 5.731851221503515 0.8481046878870278 4 {I|L} 1 -1 10.596 0.0 0.0 0.82732 0.0 0.0 1149.6609572150192 0.0 1149.6609572150192 0.0 5.991838268834169 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.82732 + + 179 + 1 1.031 115882.1 1.0 10853 4934 15779 HBL1_DMSO_200M_050219_2,15789 HBL1_DMSO_200M_050219_2,15789,KKLMKTFSVTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15790 83.061 733.0 209780.0 25 0 15964.0 + 42789 VVISSDGQFAL 11 197 568.3023621619925 1134.590171390785 2 568.3031494021416 MULTI CID FTMS 0 0 0 15779 188041.03125 0.753912967486767 1 -0.2057342529296875 11 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 24.020572477871973 0.5281922720044371 4 VV{I|L}[C(Carbamidomethyl (C))D]{I|L}T{[MG]|[TS]}K 10 7 + 26.884 0.0 0.0 2.3695 2.3695 64.508 0.0 0.0 0.0 3.3990201143137533 1.3008871492820615 1.3008871492820615 2.269987279362624 0 0.0 1.6989700043360187 0.5 0.0 VV{I|L}[C(Carbamidomethyl (C))D]{I|L}T{[MG]|[TS]}K;VV{I|L}S[WY][SG]PQ;VV{[C(Carbamidomethyl (C))E]|[WC]}V{I|L}T{[MG]|[TS]}K;VV{I|L}S[{M(Oxidation (M))|F}E][WQ]Q;VV{I|L}S{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YG]PQ;VV{I|L}{[C(Carbamidomethyl (C))E]|[WC]}[YK]PQ;VV{I|L}S{[WS]|[C(Carbamidomethyl (C)){I|L}]}[WM]K;VV{I|L}{[C(Carbamidomethyl (C))E]|[WC]}VT{[MG]|[TS]}K;VV{I|L}S[YT][DN]PK;VV{I|L}S[WD]T{[MG]|[TS]}K 2.3695;2.1694;2.1042;1.859;1.6388;1.5937;1.5937;1.5534;1.5534;1.5534 -;-;-;-;-;-;-;-;-;- 2058 1 1.031 117191.0 1.0 10854 4934 15779 HBL1_DMSO_200M_050219_2,15790 HBL1_DMSO_200M_050219_2,15790,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15791 83.076 800.0 293090.0 25 0 25420.0 -1 0 145 1006.008387517286 0 1006.008715808392 PEAK CID FTMS 0 0 0 15779 161552.953125 1.0 0 0.0 12 4 Q{I|L}HYG[RP]DC(Carbamidomethyl (C)) 9 -1 25.901 0.0 0.0 1.2886 0.0 0.0 219.13019561604352 661.3414400690061 880.4716356850497 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.4247425010840047 Q{I|L}HYG[RP]DC(Carbamidomethyl (C)) 1.2886 - 6958 + 1 1.031 150818.5 0.7200000286102295 10855 4934 15779 HBL1_DMSO_200M_050219_2,15791 HBL1_DMSO_200M_050219_2,15791, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15792 83.09 800.0 356590.0 25 0 31107.0 + 20902 LMTKLISTV 9 229 503.305565878392 1004.596578823584 2 503.2917053103447 MULTI CID FTMS 0 0 0 -1 0 13 Unmodified _LMTKLISTV_ REV__ENST00000317361.11_1_22:18218186-18218309:-|nuORF 13.50788311687929 0.4710407108020397 4 S{I|L} 2 -1 19.085 0.0 0.0 1.8998 0.0 0.0 786.469333805809 0.0 786.469333805809 0.0 3.600592417808013 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 S{I|L} 1.8998 - 2697 + 1 1.031 215584.0 0.8399999737739563 10856 4934 15779 HBL1_DMSO_200M_050219_2,15792 HBL1_DMSO_200M_050219_2,15792,LMTKLISTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15793 83.105 800.0 311210.0 25 0 7845.2 -1 0 128 1189.5304401461449 2377.04632735909 2 1190.029956042767 MULTI CID FTMS 0 0 0 15779 152958.15625 1.0 0 0.0 14 4 {[TV]|[{I|L}S]}AADTA{I|L}YY 10 -1 93.317 0.0 0.0 3.9258 0.0 0.0 0.0 1305.509399709931 1305.509399709931 40.99410690034353 0.0 0.0 0.0 0 1.5 1.0457574905606752 3.3525684359364405 0.0 {[TV]|[{I|L}S]}AADTA{I|L}YY 3.9258 - 77682 1 1.031 146792.8 0.6299999952316284 10857 4934 15779 HBL1_DMSO_200M_050219_2,15793 HBL1_DMSO_200M_050219_2,15793, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15794 83.119 800.0 228320.0 25 0 20859.0 + + 23901 IYFEYSHAF 9 168 588.3142142641116 1174.613875595023 2 588.7718383669853 MULTI CID FTMS 0 0 0 -1 0 15 Unmodified _LVMGGMVVEQL_ ENSG00000113318|ENST00000265081|MSH3 24.020572477871973 0.5281922720044371 4 [VG][RK]ACCGV{I|L} 10 -1 35.92 0.0 0.0 3.058 0.0 0.0 0.0 185.0395449274047 185.0395449274047 12.88750309660614 0.0 0.0 0.0 0 0.5796896906561032 1.2218487496163564 0.0 0.0 [VG][RK]ACCGV{I|L} 3.058 - 2462 + 1 1.031 135300.9 0.699999988079071 10858 4934 15779 HBL1_DMSO_200M_050219_2,15794 HBL1_DMSO_200M_050219_2,15794,LVMGGMVVEQL False False IYFEYSHAF 83.118699 588.771838366985 1608919.25 15779.0 ENSG00000113318|ENST00000265081|MSH3 2.7082924842834477 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15795 83.126 427.0 307750.0 25 0 44622.0 -1 0 114 739.3620052610597 2215.064186383379 3 739.3671752810478 MULTI CID FTMS 0 0 0 15779 144757.265625 0.4240899666467053 -3 0.3231430053710937 16 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}[YT]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}MSYYNA 14 -1 42.647 0.0 0.0 1.9253 0.0 0.0 0.0 554.2484874910539 554.2484874910539 5.724404412526312 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}[YT]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}MSYYNA 1.9253 - 3940 1 1.031 101440.0 1.0 10859 4934 15779 HBL1_DMSO_200M_050219_2,15795 HBL1_DMSO_200M_050219_2,15795, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15796 83.141 800.0 65642.0 25 0 2332.5 15828 ISIQKLKERQN 11 98 678.9010772409531 0 678.9785034060478 PEAK CID FTMS 0 0 0 15779 35935.28515625 0.8174125467941992 1 -0.2057342529296875 17 Unmodified _ISIQKLKERQN_ ENSG00000020577|ENST00000554335|SAMD4A;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 4.897010918128616 0.4761840153648597 4 S{I|L} 2 9 11.454 0.0 0.0 0.8448 0.0 0.0 613.3894914183912 539.2573946588499 1152.646886077241 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + S{I|L} 0.8448 + + 84 + 1 1.031 49297.7 0.699999988079071 10860 4934 15779 HBL1_DMSO_200M_050219_2,15796 HBL1_DMSO_200M_050219_2,15796,ISIQKLKERQN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15797 83.155 764.0 72109.0 25 0 12737.0 -1 0 78 1055.117724597454 0 1055.117724597454 PEAK CID FTMS 0 0 0 -1 0 18 4 YG[YG]AVV 7 -1 16.726 0.0 0.0 0.79338 0.0 0.0 1170.7680286853397 225.08835779361564 1395.856386478955 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG[YG]AVV 0.79338 - 416 + 1 1.031 41794.8 1.0 10861 4934 15779 HBL1_DMSO_200M_050219_2,15797 HBL1_DMSO_200M_050219_2,15797, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15798 83.168 800.0 92525.0 25 0 6267.5 1486 ALGKRNPG 8 122 406.7422057986259 0 406.7422057986259 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _ALGKRNPG_ ENST00000566280.1_1_16:30064796-30066515:+|nuORF 0.7936320650641473 0.5979579398327216 4 Q{I|L} 2 7 19.776 0.0 0.0 2.4371 0.0 0.0 405.27204540840006 162.0313662164672 567.3034116248673 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 Q{I|L} 2.4371 - 28 + 1 1.031 66359.1 0.7300000190734863 10862 4934 15779 HBL1_DMSO_200M_050219_2,15798 HBL1_DMSO_200M_050219_2,15798,ALGKRNPG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15799 83.183 788.0 184000.0 25 0 39923.0 + 43019 VWKKKSLYFRS 11 162 721.4213010139044 1440.8280490946088 2 721.4219238162041 MULTI CID FTMS 0 0 0 15779 119385.578125 0.3538137043244521 -3 0.3231430053710937 20 Unmodified _VWKKKSLYFRS_ REV__ENSG00000196136|ENST00000393078|SERPINA3 2.498486711656943 0.8633599123570009 4 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}QS{I|L} 6 -1 15.979 0.0 0.0 1.109 0.0 0.0 0.0 735.4389339338177 735.4389339338177 5.009716596306008 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}QS{I|L} 1.109 - 415 1 1.031 111249.9 1.0 10863 4934 15779 HBL1_DMSO_200M_050219_2,15799 HBL1_DMSO_200M_050219_2,15799,VWKKKSLYFRS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15801 83.187 53.0 811570.0 25 0 54652.0 + 26068 NMVDIIHSV 9 76 514.2656279015097 1026.5167028698193 2 514.2662231326103 MULTI CID FTMS 0 0 0 15800 473445.375 0.1500649815134904 2 -0.1559371948242187 1 Unmodified _NMVDIIHSV_ ENSG00000114054|ENST00000251654|PCCB;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;nc|ENSG00000114054|P05166-2|PCCB 48.345845343767074 0.0439967357579942 4 [MN]V{NN|[MP]|[D{I|L}]|[EV]}{I|L}[HS]V 9 0 + 44.814 0.0 0.0 4.3656 4.3656 82.874 0.0 0.0 0.0 27.44501417582205 6.608879797944724 6.608879797944724 22.076535400881014 0 0.7302046884880937 1.6989700043360187 1.2302046884880935 0.0 + + [MN]V{NN|[MP]|[D{I|L}]|[EV]}{I|L}[HS]V;{[TV]|[{I|L}S]}HV[{M(Oxidation (M))|F}V]YY;[HS]V{I|L}[{M(Oxidation (M))|F}V]YY;[VS]H{I|L}[{M(Oxidation (M))|F}V]YY;[H{I|L}]SV[{M(Oxidation (M))|F}V]YY;[HS]{I|L}V[{M(Oxidation (M))|F}V]YY 4.3656;2.215;1.1191;0.82586;0.73145;0.73145 +;-;-;-;-;- + 192 + 1 1.025 37242.2 1.0 10864 4935 15800 HBL1_DMSO_200M_050219_2,15801 HBL1_DMSO_200M_050219_2,15801,NMVDIIHSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15802 83.19 114.0 552420.0 25 0 54010.0 + 31977 RVFIGNLNTL 10 102 573.8351294612718 1145.6557059893437 2 573.8353149294853 MULTI CID FTMS 0 0 0 15800 343292.78125 0.2073582662781058 1 -0.0974044799804687 2 Unmodified _RVFIGNLNTL_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000556181.1_1_14:58987979-58988105:+|nuORF;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 38.17557092003332 0.1768326257063233 4 {I|L}GN{I|L}NT{I|L} 7 3 58.219 0.0 0.0 5.0817 0.0 0.0 402.23875624824376 0.0 402.23875624824376 0.0 32.85789402675583 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 + {I|L}GN{I|L}NT{I|L} 5.0817 + + 501 1 1.025 54120.0 1.0 10865 4935 15800 HBL1_DMSO_200M_050219_2,15802 HBL1_DMSO_200M_050219_2,15802,RVFIGNLNTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15803 83.191 16.0 3830400.0 25 0 757330.0 20376 LLGPRLVLA 9 77 476.3211434766972 950.6277340201945 2 476.3206359744072 MULTI CID FTMS 0 0 0 15800 3438533.5 0.2514467829787141 -3 0.3943023681640625 3 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 42.09456458481378 0.0639583784996157 4 {I|L}{I|L}G 3 6 50.802 0.0 0.0 5.344 0.0 0.0 0.0 664.4177950494749 664.4177950494749 32.69795311511906 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 + {I|L}{I|L}G 5.344 + + 144 + 1 1.025 52099.0 1.0 10866 4935 15800 HBL1_DMSO_200M_050219_2,15803 HBL1_DMSO_200M_050219_2,15803,LLGPRLVLA True True KLAPPLVTL 83.190959 476.320635974407 6658767.5 15800.0 nc|ENSG00000100280|Q10567-2|AP1B1;;nc|ENSG00000006125|P63010|AP2B1;;ENSG00000100280|ENST00000357586|AP1B1;;nc|ENSG00000100280|Q10567-4|AP1B1;;nc|ENSG00000006125|P63010-3|AP2B1;;nc|ENSG00000100280|Q10567-3|AP1B1;;ENSG00000006125|ENST00000610402|AP2B1;;ENST00000441188.2_1_X:92478653-92479352:-|nuORF 0.4294210275014241 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15804 83.192 43.0 1289900.0 25 0 159920.0 + 2763 ATMPDLYHL 9 87 530.7607717446011 0 530.7606078982353 PEAK CID FTMS 0 0 0 15800 1171590.0 1.0 0 0.0 4 Unmodified _ATMPDLYHL_ ENSG00000132792|ENST00000361383|CTNNBL1;ENST00000373473.5_1_20:36374873-36393614:+|nuORF;nc|ENSG00000132792|Q8WYA6-4|CTNNBL1 44.40701690623563 0.0469661192146891 4 MPD{I|L}YH 6 3 34.824 0.0 0.0 3.2868 0.0 0.0 172.0874481749459 128.07209192447502 300.1595400994209 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 + MPD{I|L}YH 3.2868 + + 134 + 1 1.025 48363.3 1.0 10867 4935 15800 HBL1_DMSO_200M_050219_2,15804 HBL1_DMSO_200M_050219_2,15804,ATMPDLYHL True True ATMPDLYHL 83.192178 530.760607898235 7216914.5 15800.0 nc|ENSG00000132792|Q8WYA6-4|CTNNBL1;;ENSG00000132792|ENST00000361383|CTNNBL1;;ENST00000373473.5_1_20:36374873-36393614:+|nuORF 8.68065357208252 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15805 83.194 50.0 940510.0 25 0 241350.0 -1 TVTICMDYI 9 67 566.2564824968313 1130.4984120604624 2 566.2568847537041 MULTI CID FTMS 0 0 0 15800 1122289.5 1.0 0 0.0 5 Carbamidomethyl (C),Oxidation (M) _TVTIC(Carbamidomethyl (C))M(Oxidation (M))DYI_ ENSG00000076770|ENST00000370853|MBNL3;nc|ENSG00000076770|Q9NUK0-2|MBNL3;nc|ENSG00000076770|Q9NUK0-3|MBNL3;nc|ENSG00000076770|Q9NUK0-4|MBNL3;nc|ENSG00000076770|Q9NUK0-5|MBNL3 13.50788311687929 0.4710407108020397 4 {[TV]|[{I|L}S]}A 3 -1 26.452 0.0 0.0 2.3399 0.0 0.0 0.0 856.3223616056374 856.3223616056374 3.264837301042718 0.0 0.0 0.0 0 0.0 2.0 0.25 0.0 {[TV]|[{I|L}S]}A 2.3399 - 46 1 1.025 41510.4 1.0 10868 4935 15800 HBL1_DMSO_200M_050219_2,15805 HBL1_DMSO_200M_050219_2,15805,TVTICMDYI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15806 83.195 66.0 1329000.0 25 0 205440.0 1889 ALWEPLPV 8 80 462.7612221367425 923.5078913402848 2 462.7439758181572 MULTI CID FTMS 0 0 0 15800 43964.09375 0.4620846791702221 1 -0.0974044799804687 6 Unmodified _ALWEPLPV_ ENST00000203630.9_2_12:6862314-6862602:-|nuORF 10.183394434864962 0.7604730176254005 4 TV 2 7 12.351 0.0 0.0 1.3374 0.0 0.0 705.3810125334475 0.0 705.3810125334475 0.0 1.1533174688410757 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 TV 1.3374 - 43 + 1 1.025 70616.4 1.0 10869 4935 15800 HBL1_DMSO_200M_050219_2,15806 HBL1_DMSO_200M_050219_2,15806,ALWEPLPV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15807 83.198 147.0 1260700.0 25 0 169870.0 + 18313 KVLDLKINL 9 155 528.3448548508848 1054.6751567685694 2 528.3448974490166 MULTI CID FTMS 0 0 0 15800 779465.625 0.6741631159645212 -1 0.2057342529296875 7 Unmodified _KVLDLKINL_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 104.48436234954404 0.008620177265826 4 KV{I|L}D{I|L}{I|L}KN{I|L} 9 2 + 90.588 0.0 0.0 8.5891 8.5891 82.403 0.0 0.0 0.0 23.69063880935809 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 2.378144697160131 0.721246399047171 0.3494850021680094 2.1307196863200843 KV{I|L}D{I|L}{I|L}KN{I|L};KV{I|L}D{I|L}{I|L}KQV;KV{I|L}EV{I|L}KN{I|L};KV{I|L}EV{I|L}KQV;KV{I|L}D{I|L}{I|L}K{I|L}N;KV{I|L}EV{I|L}K{I|L}N;KV{I|L}D{I|L}{I|L}KGG{I|L};KV{I|L}D{I|L}{I|L}K[AG]V;KV{I|L}EV{I|L}KGG{I|L};KV{I|L}D{I|L}QKV{I|L} 8.5891;8.4222;8.0733;7.9063;7.8872;7.3713;7.3133;7.1464;6.7975;6.766 -;-;-;-;-;-;-;-;-;- 8171 + 1 1.025 143848.3 1.0 10870 4935 15800 HBL1_DMSO_200M_050219_2,15807 HBL1_DMSO_200M_050219_2,15807,KVLDLKINL True True KVLDLKINL 83.198049 528.344897449017 15786146.0 15800.0 ENSG00000197969|ENST00000360280|VPS13A;;nc|ENSG00000197969|Q96RL7-2|VPS13A;;nc|ENSG00000197969|Q96RL7-4|VPS13A;;nc|ENSG00000197969|Q96RL7-3|VPS13A 3.0109193325042725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15808 83.201 122.0 1318400.0 25 0 130380.0 + 25926 NLLPKLHIV 9 148 523.8397327492457 1045.6649125652914 2 523.8403198122978 MULTI CID FTMS 0 0 0 15800 784612.0625 1.0 0 0.0 8 Unmodified _NLLPKLHIV_ ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1 74.42276476219924 0.019389277360085 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V 9 0 + 62.968 0.0 0.0 6.0218 6.0218 56.759 0.0 0.0 0.0 20.64406530994224 0.0 0.0 0.0 0 1.6549471895720984 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}HV{I|L};[H{I|L}][KP]{I|L}{I|L}N[{I|L}V];[H{I|L}]{I|L}KP{I|L}N[{I|L}V];[KA][Y{I|L}]{I|L}{I|L}N[{I|L}V];[H{I|L}][KP]{I|L}VQ[{I|L}V];[H{I|L}]{I|L}KPVQ[{I|L}V];[KA][Y{I|L}]{I|L}VQ[{I|L}V];[H{I|L}][KP]{I|L}{I|L}GG[{I|L}V];[H{I|L}]{I|L}KP{I|L}GG[{I|L}V] 6.0218;6.0218;3.1545;3.1331;3.082;2.7739;2.7525;2.7014;2.2739;2.2525 +;-;-;-;-;-;-;-;-;- + 1068 + 1 1.025 125675.2 1.0 10871 4935 15800 HBL1_DMSO_200M_050219_2,15808 HBL1_DMSO_200M_050219_2,15808,NLLPKLHIV True True NLLPKLHIV 83.200576 523.8409 12357561.25 15800.0 ENSG00000169504|ENST00000374379|CLIC4;;ENSG00000213719|ENST00000375784|CLIC1 5.72182019551595 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15809 83.202 41.0 1331400.0 25 0 139600.0 + 12409 GTINDISVLRV 11 72 593.8451643894175 0 593.8442260622978 PEAK CID FTMS 0 0 0 15800 500738.75 1.0 0 0.0 9 Unmodified _GTINDISVLRV_ ENSG00000266967|ENST00000427569|AARSD1;ENST00000416949.5_1_17:41109156-41116489:-|nuORF;ENST00000441280.7_1_17:41108193-41116457:-|nuORF;nc|ENSG00000266967|Q9BTE6-2|AARSD1;nc|ENSG00000266967|Q9BTE6-3|AARSD1 12.35033696204008 0.428557682617381 4 ND{I|L}SV{I|L} 6 5 29.641 0.0 0.0 2.4999 0.0 0.0 271.15465944356725 270.15729700260005 541.3119564461673 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + ND{I|L}SV{I|L} 2.4999 + + 159 + 1 1.025 48721.5 1.0 10872 4935 15800 HBL1_DMSO_200M_050219_2,15809 HBL1_DMSO_200M_050219_2,15809,GTINDISVLRV False True GTINDISVLRV 83.201763 593.844226062298 3439322.0 15800.0 nc|ENSG00000266967|Q9BTE6-2|AARSD1;;nc|ENSG00000266967|Q9BTE6-3|AARSD1;;ENSG00000266967|ENST00000427569|AARSD1;;ENST00000441280.7_1_17:41108193-41116457:-|nuORF;;ENST00000416949.5_1_17:41109156-41116489:-|nuORF 3.72326389948527 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15810 83.203 55.0 896260.0 25 0 124520.0 + 34128 SLLSHVEQL 9 98 513.2844440045574 1024.5543350759149 2 513.2853881716728 MULTI CID FTMS 0 0 0 15800 545817.0 0.4630969449640889 -1 0.2057342529296875 10 Unmodified _SLLSHVEQL_ ENSG00000116670|ENST00000376692|MAD2L2;ENST00000376664.10_1_1:11735929-11741152:-|nuORF 68.08070601005525 0.0218408846571049 4 {[TV]|[{I|L}S]}HVTVEQ{I|L} 9 3 + 67.787 0.0 0.0 6.6162 6.6162 86.166 0.0 0.0 0.0 19.864692631441784 9.889917747712644 9.889917747712644 8.066884185923655 0 0.9876954943324544 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}HVTVEQ{I|L};{[TV]|[{I|L}S]}HVEVTQ{I|L};{[TV]|[{I|L}S]}HD{I|L}VTQ{I|L};{[TV]|[{I|L}S]}HVEE{I|L}[KA];{[TV]|[{I|L}S]}HD{I|L}E{I|L}[KA];{[TV]|[{I|L}S]}HVEVV{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}{I|L}{[CA]|SS}TV[YR];{[TV]|[{I|L}S]}{[MG]|[TS]}VTV[YR];{[TV]|[{I|L}S]}HD{I|L}VV{[QD]|[EN]|[WG]|[KD]|[RS]};[HS]{I|L}VTVEQ{I|L} 6.6162;5.8289;5.5351;5.2794;4.9856;4.6918;4.6774;4.457;4.398;3.8612 -;-;-;-;-;-;-;-;-;- 818 1 1.025 43862.4 1.0 10873 4935 15800 HBL1_DMSO_200M_050219_2,15810 HBL1_DMSO_200M_050219_2,15810,SLLSHVEQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15811 83.206 125.0 3545800.0 25 0 735530.0 + -1 LSAMGFDAI 9 101 470.7263908802107 939.4382288272216 2 470.7265502810478 MULTI CID FTMS 0 0 0 15800 529662.8125 0.1664944931860008 -6 0.722381591796875 11 Oxidation (M) _LSAM(Oxidation (M))GFDAI_ REV__ENSG00000160469|ENST00000309383|BRSK1;REV__ENSG00000174672|ENST00000528841|BRSK2;REV__ENST00000531078.1_1_11:1463684-1466535:+|nuORF;REV__nc|ENSG00000160469|Q8TDC3-2|BRSK1;REV__nc|ENSG00000160469|Q8TDC3-3|BRSK1;REV__nc|ENSG00000174672|Q8IWQ3-2|BRSK2;REV__nc|ENSG00000174672|Q8IWQ3-3|BRSK2;REV__nc|ENSG00000174672|Q8IWQ3-4|BRSK2;REV__nc|ENSG00000174672|Q8IWQ3-5|BRSK2;REV__nc|ENSG00000174672|Q8IWQ3-6|BRSK2 46.020951573049366 0.0490941689151868 4 {I|L}AS 3 -1 51.287 0.0 0.0 5.4593 0.0 0.0 0.0 665.263575539594 665.263575539594 28.354706403678875 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.6861818737241735 0.0 {I|L}AS 5.4593 - 207 + 1 1.025 342784.6 1.0 10874 4935 15800 HBL1_DMSO_200M_050219_2,15811 HBL1_DMSO_200M_050219_2,15811,LSAMGFDAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15812 83.209 180.0 712810.0 25 0 72984.0 + 29299 QIIRELQVL 9 110 556.3452079361213 1110.6758629390424 2 556.3458129763603 MULTI CID FTMS 0 0 0 15800 518644.0625 1.0 0 0.0 12 Unmodified _QIIRELQVL_ ENSG00000126934|ENST00000262948|MAP2K2;ENSG00000169032|ENST00000307102|MAP2K1;ENST00000425818.2_1_15:66679685-66737158:+|nuORF;ENST00000519737.1_1_8:29885475-29885718:+|nuORF;ENST00000599345.1_1_19:4101110-4123872:-|nuORF;nc|ENSG00000169032|Q02750-2|MAP2K1 96.11092074494114 0.0124975504059861 4 [Q{I|L}]V[TP]T{I|L}QV{I|L} 10 4 + 70.917 0.0 0.0 6.3851 6.3851 74.865 0.0 0.0 0.0 13.749777650026957 13.521825181113629 13.521825181113629 0.7648373010427321 0 1.1307196863200843 1.5228787452803376 1.3494850021680094 1.803312144463609 [Q{I|L}]V[TP]T{I|L}QV{I|L};[Q{I|L}]VW{I|L}{I|L}QV{I|L};[Q{I|L}]V[TP]T{I|L}[AG]V{I|L};[Q{I|L}]VW{I|L}{I|L}[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[TP]T{I|L}QV{I|L};{[RE]|[WV]}[Q{I|L}]{I|L}{I|L}QV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}W{I|L}{I|L}QV{I|L};[{I|L}V]Q[TP]T{I|L}QV{I|L};[AG]{I|L}V[TP]T{I|L}QV{I|L};[{I|L}V]QW{I|L}{I|L}QV{I|L} 6.3851;6.3162;5.5599;5.4871;5.1471;5.1059;5.0782;4.9161;4.8559;4.8472 -;-;-;-;-;-;-;-;-;- 550 1 1.025 107795.8 1.0 10875 4935 15800 HBL1_DMSO_200M_050219_2,15812 HBL1_DMSO_200M_050219_2,15812,QIIRELQVL True True QIIRELQVL 83.20924 556.34581297636 3051405.25 15800.0 ENSG00000126934|ENST00000262948|MAP2K2;;nc|ENSG00000169032|Q02750-2|MAP2K1;;ENST00000425818.2_1_15:66679685-66737158:+|nuORF;;ENST00000599345.1_1_19:4101110-4123872:-|nuORF;;ENSG00000169032|ENST00000307102|MAP2K1;;ENST00000519737.1_1_8:29885475-29885718:+|nuORF 4.378034273783366 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15813 83.217 463.0 388630.0 25 0 48201.0 + 11375 GGEDGEGIFV 10 181 490.2222571128808 978.4299612925616 2 490.2228576540947 MULTI CID FTMS 0 0 0 15800 446712.40625 0.927976148434668 -2 0.2484893798828125 13 Unmodified _GGEDGEGIFV_ ENSG00000082458|ENST00000374360|DLG3;ENSG00000150672|ENST00000376104|DLG2;ENST00000529111.5_1_11:83344252-84634162:-|nuORF;nc|ENSG00000082458|Q92796-2|DLG3;nc|ENSG00000150672|Q15700-3|DLG2;nc|ENSG00000150672|Q15700-4|DLG2;nc|ENSG00000150672|Q15700|DLG2 20.453626601364224 0.5043500229302764 4 [TP]{I|L} 3 9 35.282 0.0 0.0 3.6059 0.0 0.0 0.0 664.221287546721 664.221287546721 12.600409753401358 0.0 0.0 0.0 0 0.5 2.0 0.7059771852360797 0.0 [TP]{I|L} 3.6059 - 627 1 1.025 135979.8 1.0 10876 4935 15800 HBL1_DMSO_200M_050219_2,15813 HBL1_DMSO_200M_050219_2,15813,GGEDGEGIFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15814 83.227 563.0 517580.0 25 0 84704.0 + 1525 ALISYCPSS 9 170 314.15352150719866 939.438735121796 3 314.1528198122978 MULTI CID FTMS 0 0 0 15800 398698.84375 0.1410623396868474 -6 0.722381591796875 14 Unmodified _ALISYCPSS_ REV__ENST00000528234.5_1_11:58874728-58877073:+|nuORF;REV__ENST00000529618.5_2_11:58874728-58891664:+|nuORF 28.486842064014134 0.1687311288560894 4 A{I|L}{I|L}S 4 -1 57.083 0.0 0.0 6.0763 0.0 0.0 0.0 552.1794527643186 552.1794527643186 44.75436218251264 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.6861818737241735 0.0 A{I|L}{I|L}S 6.0763 + + 80 + 1 1.025 231029.5 1.0 10877 4935 15800 HBL1_DMSO_200M_050219_2,15814 HBL1_DMSO_200M_050219_2,15814,ALISYCPSS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15815 83.23 137.0 818410.0 25 0 64033.0 + 23757 LVADKLEPL 9 113 499.30059868915214 996.5866444451044 2 499.3000060915947 MULTI CID FTMS 0 0 0 15800 413195.25 0.688751874993098 -1 0.2057342529296875 15 Unmodified _LVADKLEPL_ REV__ENSG00000148481|ENST00000277632|MINDY3 43.9818466556824 0.0535980856389242 4 {[VA]|[{I|L}G]}{I|L}SVG{I|L}[EP]{I|L} 10 -1 + 53.54 0.0 0.0 5.3723 5.3723 74.286 0.0 0.0 0.0 2.727562184969379 4.259687322722812 2.727562184969379 2.727562184969379 0 1.1989700043360187 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}SVG{I|L}[EP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}G{I|L}[EP]{I|L};{[VA]|[{I|L}G]}EKV{I|L}[EP]{I|L};{[VA]|[{I|L}G]}EVK{I|L}[EP]{I|L};{[VA]|[{I|L}G]}{I|L}SR{I|L}[EP]{I|L};{[VA]|[{I|L}G]}{I|L}SGV{I|L}[EP]{I|L};{[VA]|[{I|L}G]}{I|L}DK{I|L}[EP]{I|L};{[VA]|[{I|L}G]}{I|L}KD{I|L}[EP]{I|L};{[VA]|[{I|L}G]}{[SA]|[TG]}VV{I|L}[EP]{I|L};{[VA]|[{I|L}G]}D{I|L}K{I|L}[EP]{I|L} 5.3723;5.0986;5.0499;4.7478;4.7169;4.6709;4.6709;4.6709;4.6559;4.5764 -;-;-;-;-;-;-;-;-;- 3065 1 1.025 89036.4 1.0 10878 4935 15800 HBL1_DMSO_200M_050219_2,15815 HBL1_DMSO_200M_050219_2,15815,LVADKLEPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15816 83.239 531.0 451170.0 25 0 33901.0 -1 0 124 807.6538905381896 3226.586456286358 4 807.9059936404228 MULTI CID FTMS 0 0 0 15800 308531.34375 0.5888404129646958 -1 0.2057342529296875 16 4 [WR]D{I|L}{[QG]|[NA]}D 7 -1 21.203 0.0 0.0 0.65712 0.0 0.0 0.0 2353.194045009189 2353.194045009189 1.994332193581414 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.3494850021680094 [WR]D{I|L}{[QG]|[NA]}D 0.65712 - 255 + 1 1.025 173081.0 1.0 10879 4935 15800 HBL1_DMSO_200M_050219_2,15816 HBL1_DMSO_200M_050219_2,15816, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15817 83.249 518.0 254010.0 25 0 20209.0 -1 ILRPHCTANL 10 150 597.8225037737153 1193.6304546142303 2 598.3239013552666 MULTI CID FTMS 0 0 0 15800 326681.125 0.8344885006134656 -2 0.2484893798828125 17 Carbamidomethyl (C) _ILRPHC(Carbamidomethyl (C))TANL_ ENST00000445551.1_1_1:47897910-47898048:-|nuORF 24.020572477871973 0.4289996903560794 4 {I|L}{I|L}{M(Oxidation (M))|F}AS{I|L}Y[PA]TV 11 -1 + 44.319 0.0 0.0 3.713 3.713 66.825 0.0 0.0 0.0 18.86896464716333 1.8231326703828543 1.8231326703828543 1.9629464514396844 0 0.3807196863200844 2.0 0.555462187404089 0.0 {I|L}{I|L}{M(Oxidation (M))|F}AS{I|L}Y[PA]TV;{I|L}{I|L}{M(Oxidation (M))|F}AS{I|L}Y[PA]S{I|L};{I|L}{I|L}{M(Oxidation (M))|F}AS{I|L}{[WT]|[RM]}M{I|L};{I|L}{I|L}{M(Oxidation (M))|F}ASK[C(Carbamidomethyl (C))R]TV;{I|L}{I|L}{M(Oxidation (M))|F}ASK[C(Carbamidomethyl (C))R]S{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[RD]Y[PA]TV;{I|L}{I|L}{M(Oxidation (M))|F}[RD]Y[PA]S{I|L};{I|L}{I|L}C(Carbamidomethyl (C))Y{I|L}[C(Carbamidomethyl (C))K][KP];{I|L}{I|L}EP[RH]VDC{I|L};{I|L}{I|L}{M(Oxidation (M))|F}A[C(Carbamidomethyl (C))H]{I|L}[HA]{I|L} 3.713;3.5485;3.3026;3.2502;3.0857;3.0429;2.8784;2.7334;2.4072;2.3939 -;-;-;-;-;-;-;-;-;- 3026 + 1 1.025 99952.4 1.0 10880 4935 15800 HBL1_DMSO_200M_050219_2,15817 HBL1_DMSO_200M_050219_2,15817,ILRPHCTANL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15818 83.26 588.0 406750.0 25 0 27075.0 + 29316 QILEAIPQV 9 181 505.7979415311242 1009.5813301290484 2 505.7978698611259 MULTI CID FTMS 0 0 0 15800 278644.90625 1.0 0 0.0 18 Unmodified _QILEAIPQV_ ENSG00000100938|ENST00000399440|GMPR2;ENST00000559287.5_1_14:24702733-24706289:+|nuORF;ENST00000559606.1_1_14:24704927-24706289:+|nuORF;nc|ENSG00000100938|Q9P2T1-2|GMPR2;nc|ENSG00000100938|Q9P2T1-3|GMPR2 115.6920309560759 0.0032017028976397 4 [Q{I|L}]{I|L}EA{I|L} 6 3 50.944 0.0 0.0 5.0461 0.0 0.0 0.0 339.1663483292994 339.1663483292994 26.67491677836061 0.0 0.0 0.0 0 0.7887254899964358 1.2218487496163564 1.2134679910804405 1.045443526596511 + [Q{I|L}]{I|L}EA{I|L} 5.0461 + + 4557 1 1.025 180577.5 1.0 10881 4935 15800 HBL1_DMSO_200M_050219_2,15818 HBL1_DMSO_200M_050219_2,15818,QILEAIPQV True True QILEAIPQV 83.260021 505.797869861126 2354976.5 15800.0 ENST00000559287.5_1_14:24702733-24706289:+|nuORF;;ENSG00000100938|ENST00000399440|GMPR2;;ENST00000559606.1_1_14:24704927-24706289:+|nuORF;;nc|ENSG00000100938|Q9P2T1-2|GMPR2;;nc|ENSG00000100938|Q9P2T1-3|GMPR2 6.433859825134277 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15819 83.269 532.0 229980.0 25 0 34046.0 -1 TVFTDHMLTV 10 154 590.2885803213674 1178.5626077095346 2 590.2899658083916 MULTI CID FTMS 0 0 0 15800 281021.375 1.0 0 0.0 19 Oxidation (M) _TVFTDHM(Oxidation (M))LTV_ ENSG00000060982|ENST00000261192|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;nc|ENSG00000060982|P54687-5|BCAT1 34.40172386719151 0.2166836008404837 4 VT{M(Oxidation (M))|F}V[C(Carbamidomethyl (C))N]GNVAV 11 -1 + 42.916 0.0 0.0 3.6414 3.6414 64.936 0.0 0.0 0.0 2.6723023321134107 0.9439457403584796 0.9439457403584796 1.1739143635758469 0 0.0 2.0 0.0 0.0 VT{M(Oxidation (M))|F}V[C(Carbamidomethyl (C))N]GNVAV;VT{M(Oxidation (M))|F}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NG][WP];VT{M(Oxidation (M))|F}V[C(Carbamidomethyl (C))N]GNVG{I|L};VT{M(Oxidation (M))|F}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HS]MV;VT{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}[DV]NVAV;VT{M(Oxidation (M))|F}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EEPV;VT{M(Oxidation (M))|F}Y{I|L}T[YC(Carbamidomethyl (C))]{I|L};VT{M(Oxidation (M))|F}Y[VP][HS]MV;VT{M(Oxidation (M))|F}Y{I|L}T{[YC]|[HE]}AV;VT{M(Oxidation (M))|F}V[C(Carbamidomethyl (C))N]GGGVAV 3.6414;3.5418;3.4248;3.3165;3.0829;3.0316;2.9665;2.9345;2.9277;2.8669 -;-;-;-;-;-;-;-;-;- 2940 + 1 1.025 94063.0 1.0 10882 4935 15800 HBL1_DMSO_200M_050219_2,15819 HBL1_DMSO_200M_050219_2,15819,TVFTDHMLTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15820 83.281 648.0 238340.0 25 0 36736.0 + 7419 EGLKLMNL 8 168 459.2597283428399 0 459.2597839236259 PEAK CID FTMS 0 0 0 15800 221643.34375 1.0 0 0.0 20 Unmodified _EGLKLMNL_ ENSG00000177200|ENST00000447540|CHD9;ENST00000569225.5_1_16:53269177-53281416:+|nuORF;nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9 62.57269311338072 0.0175719110665012 4 NM{I|L}K{I|L} 5 5 31.899 0.0 0.0 3.4805 0.0 0.0 131.09244144954852 183.04187952213127 314.1343209716798 0.0 0.0 0.0 0.0 0 1.6861818737241734 0.0 0.0 0.0 NM{I|L}K{I|L} 3.4805 - 552 + 1 1.025 121900.2 1.0 10883 4935 15800 HBL1_DMSO_200M_050219_2,15820 HBL1_DMSO_200M_050219_2,15820,EGLKLMNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15822 83.285 0.49 148750000.0 25 0 28470000.0 + 4653 DAYVLPKLY 9 61 541.3001215762505 1080.585690219301 2 541.3006469607353 MULTI CID FTMS 0 0 0 15821 121945720.0 0.8520396904148536 -1 0.0974044799804687 1 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 43.85829265575387 0.0542763391141878 4 {[DA]|[EG]}YV{I|L}PK{I|L}Y 9 0 + 68.343 0.0 0.0 6.3246 6.3246 92.462 0.0 0.0 0.0 40.093728280886936 11.215686636715034 11.215686636715034 68.34298458249968 0 1.2302046884880935 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L}Y 6.3246 + + 87 + 1 1.009 62351.7 1.0 10884 4936 15821 HBL1_DMSO_200M_050219_2,15822 HBL1_DMSO_200M_050219_2,15822,DAYVLPKLY True True DAYVLPKLY 83.284784 541.300646960735 7373154560.0 15821.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 7.352588017781575 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15823 83.286 4.3 8372600.0 25 0 1701800.0 -1 CMLSPRTPTV 10 73 581.2920041780851 1160.56945542297 2 582.2923461794853 MULTI CID FTMS 0 0 0 15821 9793381.0 0.78104044448588 1 -0.05853271484375 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))MLSPRTPTV_ ENST00000560812.5_1_15:31515523-31515601:-|nuORF 13.042465956692816 0.6287021003332052 4 {[TV]|[{I|L}S]}[HC]Y{I|L}EV[TP] 10 -1 + 42.452 0.0 0.0 3.6579 3.6579 73.917 0.0 0.0 0.0 7.097784055843093 5.764837301042718 5.764837301042718 7.097784055843093 0 0.0 2.0 0.8807196863200843 0.0 {[TV]|[{I|L}S]}[HC]Y{I|L}EV[TP];[HM]DT{M(Oxidation (M))|F}{I|L}TV[TP];[HM]DT{I|L}{M(Oxidation (M))|F}TV[TP];[HM]DT{I|L}T{M(Oxidation (M))|F}V[TP];{[QN]|[E{I|L}]|[KN]}EEM{I|L}TV[TP];{[QN]|[E{I|L}]|[KN]}EEP{M(Oxidation (M))|F}TV[TP];[HM][TA]Y{I|L}EV[TP];{[QN]|[E{I|L}]|[KN]}EEPT{M(Oxidation (M))|F}V[TP];VV[{M(Oxidation (M))|F}V]{I|L}Y{[YC]|[HE]}GV;[TP][{M(Oxidation (M))|F}V]{I|L}Y[TA]{[{M(Oxidation (M))|F}C]|[YS]} 3.6579;3.0463;2.6352;2.2241;2.2088;1.7977;1.6752;1.3866;0.9438;0.77288 -;-;-;-;-;-;-;-;-;- 211 1 1.009 34801.0 1.0 10885 4936 15821 HBL1_DMSO_200M_050219_2,15823 HBL1_DMSO_200M_050219_2,15823,CMLSPRTPTV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15824 83.287 3.1 13015000.0 25 0 2289600.0 + 40374 VIAEILRGV 9 52 485.30821563554014 968.6018783378804 2 485.3084594607353 MULTI CID FTMS 0 0 0 15821 19438868.0 1.0 0 0.0 3 Unmodified _VIAEILRGV_ ENSG00000101361|ENST00000329276|NOP56 29.081581746732265 0.1611639662936252 4 [{I|L}V]AE{I|L}{I|L} 6 3 60.406 0.0 0.0 6.2364 0.0 0.0 0.0 327.18024622135005 327.18024622135005 53.4163750790475 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.0 0.0 + [{I|L}V]AE{I|L}{I|L} 6.2364 + + 52 + 1 1.009 37082.8 1.0 10886 4936 15821 HBL1_DMSO_200M_050219_2,15824 HBL1_DMSO_200M_050219_2,15824,VIAEILRGV False True VIAEILRGV 83.28714 485.308459460735 110993352.0 15821.0 ENSG00000101361|ENST00000329276|NOP56 4.735619862874349 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15825 83.288 3.9 10843000.0 25 0 1284500.0 + 24299 MAYPDLNEI 9 69 533.2502681592617 1064.4859833853234 2 533.2506591677666 MULTI CID FTMS 0 0 0 15821 15090778.0 1.0 0 0.0 4 Unmodified _MAYPDLNEI_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 18.13498045792455 0.3457906370836843 4 {[DS]|[MA]|[CV]|TT}YW 4 6 25.59 0.0 0.0 2.404 0.0 0.0 0.0 510.23730109456096 510.23730109456096 -0.3709559397377937 0.0 -0.3709559397377937 0.0 0 0.0 1.3010299956639813 0.2887254899964357 0.0 {[DS]|[MA]|[CV]|TT}YW 2.404 - 383 1 1.009 36624.2 1.0 10887 4936 15821 HBL1_DMSO_200M_050219_2,15825 HBL1_DMSO_200M_050219_2,15825,MAYPDLNEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15826 83.289 5.3 7435600.0 25 0 1103300.0 -1 ALMAAPLSL 9 59 451.75274496202985 901.4909369908596 2 451.7533141970634 MULTI CID FTMS 0 0 0 15821 9202783.0 0.7085919200444922 21 -2.362220764160156 5 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 63.082 0.0 0.0 6.9975 6.9975 84.242 0.0 0.0 0.0 24.76203644159419 46.88424994129406 24.76203644159419 4.771212547196626 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPAS{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAPS{I|L}A{I|L} 6.9975;6.4683;4.8668;4.199;3.8904;3.3612 -;-;-;-;-;- 153 1 1.009 38577.0 1.0 10888 4936 15821 HBL1_DMSO_200M_050219_2,15826 HBL1_DMSO_200M_050219_2,15826,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15827 83.291 6.8 7676100.0 25 0 938180.0 + 44693 YPFKPPMI 8 69 496.7675405711997 991.5205282091994 2 496.7676879763603 MULTI CID FTMS 0 0 0 15821 7451823.0 1.0 0 0.0 6 Unmodified _YPFKPPMI_ ENSG00000156587|ENST00000287156|UBE2L6 49.66892048692302 0.1408045912742846 4 YP{M(Oxidation (M))|F}KPPM{I|L} 8 0 + 69.06 0.0 0.0 6.9651 6.9651 93.56 0.0 0.0 0.0 50.60984155816196 10.723010016729653 10.723010016729653 26.07963467823147 0 0.7614393726401688 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KYPV{[QN]|[E{I|L}]|[KN]};[YV]PPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6.9651;4.3348;2.7697;2.478 +;-;-;- + 115 + 1 1.009 47908.5 1.0 10889 4936 15821 HBL1_DMSO_200M_050219_2,15827 HBL1_DMSO_200M_050219_2,15827,YPFKPPMI False True YPFKPPMI 83.290675 496.76768797636 300101472.0 15821.0 ENSG00000156587|ENST00000287156|UBE2L6 10.45500103632609 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15828 83.292 15.0 2884300.0 25 0 476630.0 19143 LEAFHLYLL 9 66 559.8143770313816 1117.614201129563 2 559.8142578005791 MULTI CID FTMS 0 0 0 15821 3519411.75 0.683827069699843 1 -0.05853271484375 7 Unmodified _LEAFHLYLL_ ENSG00000182885|ENST00000333493|ADGRG3 23.1484247019978 0.2366544122328345 4 SY{I|L}{I|L} 4 6 45.477 0.0 0.0 4.0691 0.0 0.0 623.3384266584 0.0 623.3384266584 0.0 38.48767215588211 0.0 0.0 0 0.805462187404089 0.0 0.8494850021680094 0.0 SY{I|L}{I|L} 4.0691 - 54 1 1.009 41986.8 1.0 10890 4936 15821 HBL1_DMSO_200M_050219_2,15828 HBL1_DMSO_200M_050219_2,15828,LEAFHLYLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15829 83.293 26.0 1803000.0 25 0 332360.0 + 17885 KQMEQISQFL 10 58 626.3235447646232 1250.6325365960463 2 626.3244506716728 MULTI CID FTMS 0 0 0 15821 2072723.25 0.3899909742571589 -2 0.3031387329101562 8 Unmodified _KQMEQISQFL_ ENSG00000144834|ENST00000478951|TAGLN3;ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 76.82478488871298 0.0187167883027705 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MKQ{I|L}SQ{M(Oxidation (M))|F}{I|L} 10 2 + 80.443 0.0 0.0 6.4322 6.4322 82.507 0.0 0.0 0.0 5.039237471316298 16.53212513775344 5.039237471316298 5.039237471316298 0 0.8494850021680094 0.0 1.610924374808178 0.8494850021680094 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MKQ{I|L}SQ{M(Oxidation (M))|F}{I|L};[KQ]MEQ{I|L}SQ{M(Oxidation (M))|F}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}[PG]Q{I|L}SQ{M(Oxidation (M))|F}{I|L};{[QS]|[NT]}{I|L}{[MG]|[TS]}Q{I|L}SQ{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MK[AG]{I|L}SQ{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MKQ{I|L}S[AG]{M(Oxidation (M))|F}{I|L};[KQ]ME[AG]{I|L}SQ{M(Oxidation (M))|F}{I|L};[KQ]MEQ{I|L}S[AG]{M(Oxidation (M))|F}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}[PG]Q{I|L}S[AG]{M(Oxidation (M))|F}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}[PG][AG]{I|L}SQ{M(Oxidation (M))|F}{I|L} 6.4322;6.0293;5.9401;5.7993;5.6994;5.6994;5.2965;5.2965;5.2102;5.2102 -;+;-;-;-;-;-;-;-;- + 503 1 1.009 45021.7 1.0 10891 4936 15821 HBL1_DMSO_200M_050219_2,15829 HBL1_DMSO_200M_050219_2,15829,KQMEQISQFL True True KQMEQISQFL 83.293033 626.324450671673 95290568.0 15821.0 ENSG00000158710|ENST00000368097|TAGLN2;;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;;nc|ENSG00000158710|P37802-2|TAGLN2;;ENSG00000144834|ENST00000478951|TAGLN3 7.157379945119222 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15830 83.294 39.0 1589200.0 25 0 224530.0 + 14123 ALLDRIVSV 9 73 493.3061166177448 984.5976803022896 2 493.3060180544853 MULTI CID FTMS 0 0 0 15821 1729293.5 0.4898366584193665 -2 0.3031387329101562 9 Unmodified _IAVERVISV_ ENSG00000155561|ENST00000285968|NUP205 38.17557092003332 0.0854718145212029 4 [{I|L}A]{I|L}D 4 6 38.5 0.0 0.0 3.9102 0.0 0.0 0.0 569.3440645807249 569.3440645807249 13.82958396983316 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}A]{I|L}D 3.9102 - 38 + 1 1.009 55113.9 1.0 10892 4936 15821 HBL1_DMSO_200M_050219_2,15830 HBL1_DMSO_200M_050219_2,15830,IAVERVISV True True ALLDRIVSV 83.294213 493.306018054485 45186144.0 15821.0 ENSG00000155561|ENST00000285968|NUP205 6.424163659413655 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15831 83.295 29.0 2293400.0 25 0 224330.0 27020 PELTQQFPL 9 96 536.7895884700495 1071.5646240068988 2 536.7895385622978 MULTI CID FTMS 0 0 0 15821 1721966.25 0.5461009231411313 -2 0.3031387329101562 10 Unmodified _PELTQQFPL_ ENSG00000146966|ENST00000496613|DENND2A;nc|ENSG00000146966|Q9ULE3-2|DENND2A 26.88365393820708 0.1891292719743517 4 [TP]E{I|L}QQ 6 5 44.856 0.0 0.0 4.186 0.0 0.0 0.0 372.19848535930265 372.19848535930265 10.454719427676936 0.0 0.0 0.0 0 0.0 0.744727494896694 1.8169015600442573 0.2742275032520141 [TP]E{I|L}QQ 4.186 - 781 1 1.009 56032.0 1.0 10893 4936 15821 HBL1_DMSO_200M_050219_2,15831 HBL1_DMSO_200M_050219_2,15831,PELTQQFPL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15832 83.297 29.0 2215600.0 25 0 348260.0 + 9921 FPFYGKPMRI 10 61 419.2266078236951 1254.6579940712852 3 419.5611144900322 MULTI CID FTMS 0 0 0 15821 1517606.0 0.4118234322156127 8 -0.7473220825195312 11 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 34.40172386719151 0.2166836008404837 4 PW{I|L}[KG]Y{M(Oxidation (M))|F}PE 9 6 51.872 0.0 0.0 4.1344 0.0 0.0 119.07418257881017 0.0 119.07418257881017 0.0 32.663800089887545 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}[KG]Y{M(Oxidation (M))|F}PE 4.1344 - 201 1 1.009 59941.6 1.0 10894 4936 15821 HBL1_DMSO_200M_050219_2,15832 HBL1_DMSO_200M_050219_2,15832,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15833 83.298 58.0 922890.0 25 0 109860.0 + 12723 GVLTLIGSSI 10 88 480.2925924658701 958.5706319985402 2 480.2923461794853 MULTI CID FTMS 0 0 0 15821 1031949.75 0.2393984473141178 4 -0.2744979858398437 12 Unmodified _GVLTLIGSSI_ REV__ENSG00000100342|ENST00000397278|APOL1;REV__nc|ENSG00000100342|O14791-2|APOL1;REV__nc|ENSG00000100342|O14791-3|APOL1 37.97399986684836 0.1789611706409123 4 [VG]{I|L}T{I|L}T 6 -1 54.372 0.0 0.0 5.6722 0.0 0.0 0.0 371.1920058601215 371.1920058601215 15.955612550363796 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 1.0994850021680094 0.0 [VG]{I|L}T{I|L}T 5.6722 - 483 1 1.009 47600.9 1.0 10895 4936 15821 HBL1_DMSO_200M_050219_2,15833 HBL1_DMSO_200M_050219_2,15833,GVLTLIGSSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15834 83.3 107.0 509900.0 25 0 74749.0 + 12029 GQAEPESVLLV 11 99 571.308876362331 1140.603199791462 2 571.3094970583916 MULTI CID FTMS 0 0 0 15821 806854.75 1.0 0 0.0 13 Unmodified _GQAEPESVLLV_ ENSG00000127054|ENST00000435064|INTS11;ENST00000461514.6_1_1:1248044-1249114:-|nuORF;ENST00000470030.6_1_1:1247241-1248711:-|nuORF;ENST00000478641.5_1_1:1248044-1248711:-|nuORF;ENST00000485710.5_1_1:1247522-1249186:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 33.4449034751529 0.3133739643825231 4 [EP]SV{I|L}{[CP]|[EA]}{[QG]|[NA]}{I|L}V 11 8 + 29.838 0.0 0.0 2.616 2.616 66.674 0.0 0.0 0.0 3.127269249252137 1.1208321965879655 1.1208321965879655 3.127269249252137 0 0.6549471895720985 0.8860566476931632 1.25 0.0 [EP]SV{I|L}{[CP]|[EA]}{[QG]|[NA]}{I|L}V;[TP]DV{I|L}{[CP]|[EA]}{[QG]|[NA]}{I|L}V;{[QG]|[NA]}AE[EP][VS]{I|L}{I|L}V;{[DA]|[EG]}YVY[VS]{I|L}{I|L}V;[YV]{[DA]|[EG]}Y[VS]{I|L}{I|L}V;[AG]GAE[EP][VS]{I|L}{I|L}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVY[VS]{I|L}{I|L}V;[EP]T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP]{I|L}{I|L}V;QQE[EP][VS]{I|L}{I|L}V;[AG]QE[EP][VS]{I|L}{I|L}V 2.616;2.3418;1.9923;1.8659;1.7109;1.709;1.6982;1.5788;1.4393;1.3933 -;-;+;-;-;-;-;-;-;- + 573 1 1.009 50232.1 1.0 10896 4936 15821 HBL1_DMSO_200M_050219_2,15834 HBL1_DMSO_200M_050219_2,15834,GQAEPESVLLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15835 83.302 56.0 2427300.0 25 0 418830.0 + 34993 SQMPTVIYV 9 91 519.2706408129657 1036.5267286927312 2 519.2706176638603 MULTI CID FTMS 0 0 0 15821 551639.6875 0.928020792327388 -1 0.0974044799804687 14 Unmodified _SQMPTVIYV_ ENSG00000121931|ENST00000369763|LRIF1 13.90604991867851 0.4602628045680013 4 Y{I|L}PG 4 8 18.928 0.0 0.0 1.8261 0.0 0.0 535.230233186675 68.05150781802968 603.2817410047047 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}PG 1.8261 - 85 + 1 1.009 110417.5 1.0 10897 4936 15821 HBL1_DMSO_200M_050219_2,15835 HBL1_DMSO_200M_050219_2,15835,SQMPTVIYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15836 83.308 344.0 957850.0 25 0 77998.0 + 10782 FYPPPRITL 9 160 552.3159507051236 1102.617348477047 2 552.3154785037041 MULTI CID FTMS 0 0 0 15821 540575.0 0.7460718058315605 -11 1.2999725341796875 15 Unmodified _FYPPPRITL_ ENSG00000102221|ENST00000614628|JADE3 27.628801355627647 0.1796483985696185 4 [Y{M(Oxidation (M))|F}]PPP[R{I|L}]T{I|L} 9 0 + 22.123 0.0 0.0 2.0064 2.0064 77.434 0.0 0.0 0.0 3.0136731954012035 0.4285063264600239 0.4285063264600239 22.123206286267006 0 0.4247425010840047 0.0 0.0 0.535666875892183 + + [Y{M(Oxidation (M))|F}]PPP[R{I|L}]T{I|L} 2.0064 + + 810 + 1 1.009 255030.6 1.0 10898 4936 15821 HBL1_DMSO_200M_050219_2,15836 HBL1_DMSO_200M_050219_2,15836,FYPPPRITL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15837 83.315 391.0 624970.0 25 0 72740.0 + 41467 VPLPNVPSI 9 153 468.2818541646448 934.5491553960896 2 468.2821533083916 MULTI CID FTMS 0 0 0 15821 538687.25 0.2983496848236482 -5 0.62628173828125 16 Unmodified _VPLPNVPSI_ ENSG00000101421|ENST00000217402|CHMP4B;nc|ENSG00000258469|P59074|CHMP4BP1 67.34385681178166 0.0221257235307089 4 [VP]N{I|L}PVPS{I|L} 9 2 + 53.809 0.0 0.0 5.7577 5.7577 71.631 0.0 0.0 0.0 0.4139268515822536 18.19984993812689 0.4139268515822536 0.4139268515822536 0 0.6989700043360187 1.0 0.5 0.6747425010840047 [VP]N{I|L}PVPS{I|L};[NP]V{I|L}PVPS{I|L};[VP]NVP{I|L}PS{I|L};[NP]VVP{I|L}PS{I|L};[{I|L}P]VNPVPS{I|L};[VP]{I|L}NPVPS{I|L};[VP]N{I|L}PS[VP]{I|L};[NP]V{I|L}PS[VP]{I|L};[PS][KP]P{I|L}PS{I|L};[VP]GG{I|L}PVPS{I|L} 5.7577;5.7135;5.128;5.0837;5.0588;5.0098;4.4051;4.3608;4.2237;4.0504 -;-;-;-;-;-;-;-;-;- 803 1 1.009 189975.1 1.0 10899 4936 15821 HBL1_DMSO_200M_050219_2,15837 HBL1_DMSO_200M_050219_2,15837,VPLPNVPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15838 83.317 121.0 559760.0 25 0 92431.0 34349 SLSSASTPPLW 11 107 573.2969409868756 1144.579329040551 2 573.2966796755791 MULTI CID FTMS 0 0 0 15821 474365.5625 1.0 0 0.0 17 Unmodified _SLSSASTPPLW_ ENST00000217957.9_3_X:107301321-107310193:+|nuORF 12.240655878213236 0.7805268987462184 4 {[TV]|[{I|L}S]}QQRS{M(Oxidation (M))|F} 7 8 33.651 0.0 0.0 2.94 0.0 0.0 0.0 295.1227090978077 295.1227090978077 15.69221977646535 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.75 0.0 {[TV]|[{I|L}S]}QQRS{M(Oxidation (M))|F} 2.94 - 1789 1 1.009 56877.6 1.0 10900 4936 15821 HBL1_DMSO_200M_050219_2,15838 HBL1_DMSO_200M_050219_2,15838,SLSSASTPPLW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15839 83.325 406.0 505430.0 25 0 52036.0 43078 VYLPEHYRPRQ 11 137 729.3867975991246 1456.7590422650492 2 729.3874389529228 MULTI CID FTMS 0 0 0 15821 435807.1875 0.899730677506233 -1 0.0974044799804687 18 Unmodified _VYLPEHYRPRQ_ ENST00000330368.2_1_3:169486072-169487300:-|nuORF 6.2057823575117 0.8458686499021061 4 {[DA]|[EG]}YV{I|L} 5 9 39.055 0.0 0.0 2.6809 0.0 0.0 0.0 892.4550761096343 892.4550761096343 1.9905681952393903 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8252574989159953 0.0 {[DA]|[EG]}YV{I|L} 2.6809 - 854 1 1.009 148038.3 1.0 10901 4936 15821 HBL1_DMSO_200M_050219_2,15839 HBL1_DMSO_200M_050219_2,15839,VYLPEHYRPRQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15840 83.332 410.0 299710.0 25 0 16284.0 -1 0 118 881.9067130267736 1761.798873120347 2 881.9082519412041 MULTI CID FTMS 0 0 0 15821 445430.5625 0.2337373101982157 5 -0.3898468017578125 19 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AEQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 128.45 0.0 0.0 7.2909 7.2909 82.182 0.0 0.0 0.0 8.717450926663844 16.69006780958577 8.717450926663844 3.0102999566398125 0 0.8494850021680094 1.3979400086720375 1.2521934810768762 2.139301693515057 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AEQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQENA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AENQA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]AEQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AE[AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AEQGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AEQNA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQDQA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]AQENA{M(Oxidation (M))|F}YQV{I|L} 7.2909;7.12;6.8112;6.7961;6.7783;6.7783;6.7783;6.6783;6.6403;6.6252 -;-;-;-;-;-;-;-;-;- 18874 1 1.009 86815.3 1.0 10902 4936 15821 HBL1_DMSO_200M_050219_2,15840 HBL1_DMSO_200M_050219_2,15840, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15841 83.339 396.0 1079300.0 25 0 132140.0 + 30671 RFPEELTQTF 10 173 634.3192248256998 1266.6238967181996 2 634.3195678591728 MULTI CID FTMS 0 0 0 15821 430500.75 0.9569752299730566 1 -0.05853271484375 20 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 63.22749603027936 0.0281198777558511 4 P{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C)){I|L}TQT{M(Oxidation (M))|F} 9 5 66.648 0.0 0.0 5.2619 0.0 0.0 128.09556777168126 0.0 128.09556777168126 0.0 35.633096816673486 0.0 0.0 0 0.7059771852360797 0.0 1.174742501084005 0.6237125054200234 P{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C)){I|L}TQT{M(Oxidation (M))|F} 5.2619 - 8316 1 1.009 313486.8 1.0 10903 4936 15821 HBL1_DMSO_200M_050219_2,15841 HBL1_DMSO_200M_050219_2,15841,RFPEELTQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15843 83.344 138.0 714880.0 25 0 75564.0 + 44425 YMIAHITGL 9 100 509.7733118834148 1017.5320708336296 2 509.7736694216728 MULTI CID FTMS 0 0 0 15842 682722.6875 0.9978237729240776 -1 0.05853271484375 1 Unmodified _YMIAHITGL_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 77.98433622928108 0.0180125044636492 4 YM{I|L}AH{I|L}TG{I|L} 9 0 + 79.696 0.0 0.0 7.8323 7.8323 89.105 0.0 0.0 0.0 33.46787486224656 10.0 10.0 7.403626894942448 0 1.5356668758921828 1.6989700043360187 0.3807196863200844 0.0 + + YM{I|L}AH{I|L}TG{I|L};YM{I|L}AH{I|L}AS{I|L};YM{I|L}AH{I|L}TAV;YM{I|L}AH{I|L}ATV;Y[YV]GT{I|L}[R{M(Oxidation (M))|F}];Y[YR]T{I|L}[R{M(Oxidation (M))|F}];Y[YV]G{I|L}T[R{M(Oxidation (M))|F}];Y[YR]{I|L}T[R{M(Oxidation (M))|F}];Y[YV]G{I|L}AHPV;Y[YV]{I|L}GT[R{M(Oxidation (M))|F}] 7.8323;7.1047;6.8495;6.1219;2.8853;2.7242;2.2936;2.1325;1.8541;1.8273 +;-;-;-;-;-;-;-;-;- + 669 + 1 1.009 80587.3 1.0 10904 4937 15842 HBL1_DMSO_200M_050219_2,15843 HBL1_DMSO_200M_050219_2,15843,YMIAHITGL True True YMIAHITGL 83.343844 509.773669421673 4657380.0 15842.0 ENSG00000176890|ENST00000323274|TYMS;;nc|ENSG00000176890|P04818-3|TYMS;;chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;;nc|ENSG00000176890|P04818-2|TYMS;;ENST00000581920.1_1_18:667730-672994:+|nuORF 7.377528667449951 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15844 83.346 80.0 811930.0 25 0 71038.0 + 39588 VCYYTGVDAP 10 102 544.2398278469195 1086.465102760639 2 544.2401611208916 MULTI CID FTMS 0 0 0 15842 386534.34375 0.4815838949106618 -1 0.05853271484375 2 Unmodified _VCYYTGVDAP_ REV__chr20:1630306-1649052|45|20.42|0.82|4.63|-|ENST00000344103|SIRPG,SIRPG;REV__ENSG00000089012|ENST00000303415|SIRPG;REV__nc|ENSG00000089012|Q9P1W8-2|SIRPG;REV__nc|ENSG00000089012|Q9P1W8-3|SIRPG;REV__nc|ENSG00000089012|Q9P1W8-4|SIRPG 25.399314129420983 0.3980215340001851 4 MAYPD[YQ]S{I|L} 9 -1 + 61.661 0.0 0.0 5.6753 5.6753 76.332 0.0 0.0 0.0 27.82583442123751 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.2742275032520141 1.6989700043360187 0.3054621874040891 0.0 MAYPD[YQ]S{I|L};MAYPD[YQ]TV;MAY[YT]YY{I|L};[YV]CPD[YQ]S{I|L};[YV]CPD[YQ]TV;{[DS]|[MA]|[CV]|TT}{[HG]|PP}{I|L}[HV][YC(Carbamidomethyl (C))];[YV]C[YT]YY{I|L} 5.6753;5.3983;3.8775;2.1087;1.8316;1.7112;0.31084 -;-;-;-;-;-;- 345 + 1 1.009 57738.8 1.0 10905 4937 15842 HBL1_DMSO_200M_050219_2,15844 HBL1_DMSO_200M_050219_2,15844,VCYYTGVDAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15845 83.347 3.2 10477000.0 25 0 591980.0 + 45126 YQAPDIDVQL 10 78 581.2920041780851 1160.56945542297 2 581.2933837771416 MULTI CID FTMS 0 0 0 15842 13748226.0 0.6506502135827862 -3 0.3616714477539062 3 Unmodified _YQAPDIDVQL_ ENSG00000105373|ENST00000246802|NOP53;ENST00000600410.5_1_19:48257983-48259211:+|nuORF 31.26834338654808 0.266153677697784 4 D{I|L}[DP]CQ{I|L} 7 6 26.419 0.0 0.0 2.2764 0.0 0.0 358.2202526042144 0.0 358.2202526042144 0.0 19.429344830665585 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 D{I|L}[DP]CQ{I|L} 2.2764 - 102 + 1 1.009 30635.9 1.0 10906 4937 15842 HBL1_DMSO_200M_050219_2,15845 HBL1_DMSO_200M_050219_2,15845,YQAPDIDVQL False True YQAPDIDVQL 83.346844 581.293383777142 720033408.0 15842.0 ENSG00000105373|ENST00000246802|NOP53;;ENST00000600410.5_1_19:48257983-48259211:+|nuORF 6.679697672526042 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15846 83.353 319.0 625970.0 25 0 113700.0 + 9372 FIPPDGNFRL 10 121 588.3142142641116 1174.613875595023 2 588.3134643435478 MULTI CID FTMS 0 0 0 15842 547891.125 0.4580820253088357 -6 0.684814453125 4 Unmodified _FIPPDGNFRL_ ENSG00000070718|ENST00000396926|AP3M2;ENSG00000185009|ENST00000355264|AP3M1;ENST00000480373.1_1_10:75888732-75889691:-|nuORF;nc|ENSG00000070718|P53677-2|AP3M2 31.26834338654808 0.266153677697784 4 {[MG]|[TS]}{I|L}G[QT][DV]{I|L}{[QN]|[E{I|L}]|[KN]} 11 9 + 27.382 0.0 0.0 2.3311 2.3311 64.705 0.0 0.0 0.0 1.3559293633101213 13.050088832413527 1.3559293633101213 2.430380486862944 0 0.7059771852360797 0.0 0.7614393726401688 0.4247425010840047 {[MG]|[TS]}{I|L}G[QT][DV]{I|L}{[QN]|[E{I|L}]|[KN]};{[MG]|[TS]}{I|L}[QA]S[DV]{I|L}{[QN]|[E{I|L}]|[KN]};[DP]P{[NV]|[RG]}[TP]PP{[QN]|[E{I|L}]|[KN]};{[MG]|[TS]}{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]}[CS]P{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PP[TP]{[NV]|[RG]}QY;{[MG]|[TS]}{I|L}GAAS[DV]{I|L}{[QN]|[E{I|L}]|[KN]};{[MG]|[TS]}{I|L}[HK][PG]PP{[QN]|[E{I|L}]|[KN]};{[MG]|[TS]}{I|L}[QA]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[CS]{[QV]|[N{I|L}]|[RA]|[KV]}V[WP];[{I|L}V][C(Carbamidomethyl (C))Q]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P{[QN]|[E{I|L}]|[KN]} 2.3311;2.1242;2.0481;2.0091;1.9276;1.8129;1.8099;1.7529;1.7056;1.6382 -;-;-;-;-;-;-;-;-;- 773 1 1.009 153831.6 1.0 10907 4937 15842 HBL1_DMSO_200M_050219_2,15846 HBL1_DMSO_200M_050219_2,15846,FIPPDGNFRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15847 83.36 422.0 517970.0 25 0 36532.0 + -1 DAFNSTFI 8 133 914.4324494254988 1826.8503459177973 2 914.4272338747978 MULTI CID FTMS 0 0 0 15842 346273.34375 0.6253254520549925 -2 0.1559371948242187 5 nc|ENSG00000167461|P61006-2|RAB8A;ENST00000588105.1_1_19:16222711-16223300:+|nuORF;ENST00000589697.1_1_19:16222732-16236504:+|nuORF;ENST00000590899.5_1_19:16222711-16232755:+|nuORF;ENST00000587156.5_1_19:16222711-16238468:+|nuORF;ENSG00000167461|ENST00000300935|RAB8A 4 {[DA]|[EG]}{M(Oxidation (M))|F}NSTE[WH]A{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 109.8 0.0 0.0 6.0101 6.0101 72.064 0.0 0.0 0.0 0.1200981277238923 12.198442005886236 0.1200981277238923 0.1200981277238923 0 0.0 0.8239087409443188 1.1549471895720984 2.618415180652539 {[DA]|[EG]}{M(Oxidation (M))|F}NSTE[WH]A{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}TCWEVQNA{M(Oxidation (M))|F}YQV{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}NS[DP]VQNA{M(Oxidation (M))|F}YQV{I|L};[NS]SNNTEVQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EC(Carbamidomethyl (C))TEVQNA{M(Oxidation (M))|F}YQV{I|L};[NS]SNTNEVQNA{M(Oxidation (M))|F}YQV{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}H]|[RQ]}EVQNA{M(Oxidation (M))|F}YQV{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}N[NG]VQQNA{M(Oxidation (M))|F}YQV{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}N[NG]QVQNA{M(Oxidation (M))|F}YQV{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}NSTE[WH]A{M(Oxidation (M))|F}Y[AG]V{I|L} 6.0101;6.0035;5.8073;5.69;5.6698;5.5937;5.5762;5.5724;5.5507;5.5157 -;-;-;-;-;-;-;-;-;- 33090 1 1.009 143671.5 1.0 10908 4937 15842 HBL1_DMSO_200M_050219_2,15847 HBL1_DMSO_200M_050219_2,15847, False False DAFNSTFI 83.360212 914.427233874798 1458216.0 15842.0 nc|ENSG00000167461|P61006-2|RAB8A;;ENST00000588105.1_1_19:16222711-16223300:+|nuORF;;ENST00000589697.1_1_19:16222732-16236504:+|nuORF;;ENST00000590899.5_1_19:16222711-16232755:+|nuORF;;ENST00000587156.5_1_19:16222711-16238468:+|nuORF;;ENSG00000167461|ENST00000300935|RAB8A 3.207888603210449 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15848 83.363 167.0 396490.0 25 0 29930.0 -1 YPFKPPMI 8 94 504.76461418152553 1007.5146754298512 2 504.7628967165947 MULTI CID FTMS 0 0 0 15842 305014.75 1.0 0 0.0 6 Oxidation (M) _YPFKPPM(Oxidation (M))I_ ENSG00000156587|ENST00000287156|UBE2L6 34.18733598223924 0.3315367612694167 4 YP{M(Oxidation (M))|F}K{[HG]|PP}{M(Oxidation (M))|F}{I|L} 8 -1 + 52.6 0.0 0.0 5.2208 5.2208 84.92 0.0 0.0 0.0 39.10518797312562 0.6618377346445925 0.6618377346445925 13.521825181113629 0 0.3494850021680094 1.6989700043360187 0.0 0.0 YP{M(Oxidation (M))|F}K{[HG]|PP}{M(Oxidation (M))|F}{I|L};YP[NP]Q[YK]V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{I|L}K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[Q{I|L}][KC]K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[VP]E{M(Oxidation (M))|F}K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}P{M(Oxidation (M))|F}K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}M{I|L}K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{[ET]|[MV]}K{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[Q{I|L}]T{[HG]|PP}[NP]{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV][KP]{[QN]|[E{I|L}]|[KN]} 5.2208;3.8787;3.4627;2.0752;1.9214;1.876;1.731;1.0075;0.70634;0.4858 +;-;-;-;-;-;-;-;-;- + 177 + 1 1.009 54743.3 1.0 10909 4937 15842 HBL1_DMSO_200M_050219_2,15848 HBL1_DMSO_200M_050219_2,15848,YPFKPPMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15849 83.372 462.0 211240.0 25 0 17313.0 -1 0 108 670.6724048917235 2008.9953852753704 3 670.6736328005791 MULTI CID FTMS 0 0 0 15842 201455.1875 0.1829174837076995 3 -0.2159652709960937 7 4 {[DA]|[EG]}YV[KG]QG[YN]G{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]} 18 -1 + 66.7 0.0 0.0 3.3201 3.3201 46.705 0.0 0.0 0.0 9.100402806171374 0.0 0.0 0.0 0 0.6549471895720985 1.3010299956639813 0.2887254899964357 0.3494850021680094 {[DA]|[EG]}YV[KG]QG[YN]G{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};{[DA]|[EG]}YV[KG]QG[YN]G{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};{[DA]|[EG]}Y[RK]QG[YN]G{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};{[TV]|[{I|L}S]}VA{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[YN]G{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}VA{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[YN]G{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}H{I|L}{M(Oxidation (M))|F}G[YN]GQ{[WT]|[RM]}Q{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}K{I|L}H{I|L}{M(Oxidation (M))|F}G[YN]GQ{[WT]|[RM]}Q{[TV]|[{I|L}S]};[NP]{I|L}HYHG[YN]G{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};[NP]{I|L}HYHG[YN]G{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};[NP]{I|L}H[TA]QG[YN]G{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]} 3.3201;3.3201;3.1343;2.8671;2.8671;2.4445;2.4445;2.3271;2.3271;2.3 -;-;-;-;-;-;-;-;-;- 680 1 1.009 83225.9 1.0 10910 4937 15842 HBL1_DMSO_200M_050219_2,15849 HBL1_DMSO_200M_050219_2,15849, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15850 83.38 463.0 234290.0 25 0 23192.0 + 14317 IENQDEACYIL 11 139 655.8023139983641 1309.590075063528 2 655.8038207888603 MULTI CID FTMS 0 0 0 15842 194687.625 0.7880262585865399 -1 0.05853271484375 8 Unmodified _IENQDEACYIL_ ENSG00000144426|ENST00000683969|NBEAL1;nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1 21.53697664764585 0.586507868110548 4 {[QS]|[NT]}{I|L}E{[{M(Oxidation (M))|F}D]|MM}M[SG]A{I|L}{I|L} 12 8 + 45.624 0.0 0.0 3.4839 3.4839 69.262 0.0 0.0 0.0 10.020114748237312 13.866024867680483 10.020114748237312 3.601514477826377 0 0.6435078169319297 0.958607314841775 1.3026048219588937 0.5484550065040282 {[QS]|[NT]}{I|L}E{[{M(Oxidation (M))|F}D]|MM}M[SG]A{I|L}{I|L};{[QS]|[NT]}{I|L}E{[{M(Oxidation (M))|F}D]|MM}M{[QS]|[NT]}{I|L}{I|L};{[QS]|[NT]}{I|L}E{[{M(Oxidation (M))|F}D]|MM}[C(Carbamidomethyl (C))D]A{I|L}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}QQCE[SG]A{I|L}{I|L};{[QS]|[NT]}{I|L}E{[{M(Oxidation (M))|F}D]|MM}[WC(Carbamidomethyl (C))]{I|L}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}QQCE{[QS]|[NT]}{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}[CS]DSE{I|L}[SG]A{I|L}{I|L};[{I|L}T]NE{[{M(Oxidation (M))|F}D]|MM}M[SG]A{I|L}{I|L};[{I|L}A]GSE{[{M(Oxidation (M))|F}D]|MM}M[SG]A{I|L}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}QQCT[DG]A{I|L}{I|L} 3.4839;3.2088;2.6546;2.6001;2.3824;2.3251;2.0792;2.0658;1.9413;1.8161 -;-;-;-;-;-;-;-;-;- 1360 1 1.009 86820.8 1.0 10911 4937 15842 HBL1_DMSO_200M_050219_2,15850 HBL1_DMSO_200M_050219_2,15850,IENQDEACYIL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15851 83.391 628.0 156030.0 25 0 20106.0 2499 ARARSLRLL 9 146 352.5654211928612 0 352.5654479861259 PEAK CID FTMS 0 0 0 15842 182579.078125 1.0 0 0.0 9 Unmodified _ARARSLRLL_ ENSG00000120318|ENST00000239440|ARAP3;nc|ENSG00000120318|Q8WWN8-2|ARAP3 10.799506525563784 0.3031001954684014 4 {I|L} 1 8 6.9897 0.0 0.0 0.9941 0.0 0.0 134.75683413958126 452.2526949518188 587.0095290914 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.9941 + + 56 + 1 1.009 80242.8 1.0 10912 4937 15842 HBL1_DMSO_200M_050219_2,15851 HBL1_DMSO_200M_050219_2,15851,ARARSLRLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15852 83.395 196.0 924690.0 25 0 196040.0 + 3394 AYSLDTQVNI 10 111 562.2859995135243 0 562.2852050662041 PEAK CID FTMS 0 0 0 15842 102961.203125 0.832368313217765 -1 0.05853271484375 10 Unmodified _AYSLDTQVNI_ REV__ENSG00000166454|ENST00000299575|ATMIN;REV__nc|ENSG00000166454|O43313-2|ATMIN 15.847184025352805 0.3304572136216667 4 {M(Oxidation (M))|F}VNA{I|L}VDD 8 -1 26.573 0.0 0.0 2.3672 0.0 0.0 130.08703054015558 116.05120264224844 246.138233182404 0.0 0.0 0.0 0.0 0 0.218765315847925 0.0 0.2614393726401688 0.0 {M(Oxidation (M))|F}VNA{I|L}VDD 2.3672 - 531 + 1 1.009 140509.3 1.0 10913 4937 15842 HBL1_DMSO_200M_050219_2,15852 HBL1_DMSO_200M_050219_2,15852,AYSLDTQVNI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15854 83.405 373.0 462830.0 25 0 99246.0 -1 0 122 739.3620052610597 2215.064186383379 3 739.6953613162041 MULTI CID FTMS 0 0 0 15853 369563.8125 0.7832852839259978 -1 0.0554275512695312 1 4 {[TV]|[{I|L}S]}AEAAY{[QN]|[E{I|L}]|[KN]}[QA]YY{I|L}A 15 -1 60.333 0.0 0.0 2.7237 0.0 0.0 0.0 555.2558632391411 555.2558632391411 24.194186658486856 0.0 0.0 0.0 0 0.25 2.0 1.4802046884880935 0.0 {[TV]|[{I|L}S]}AEAAY{[QN]|[E{I|L}]|[KN]}[QA]YY{I|L}A 2.7237 - 26809 1 0.994 127649.0 1.0 10914 4938 15853 HBL1_DMSO_200M_050219_2,15854 HBL1_DMSO_200M_050219_2,15854, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15855 83.406 77.0 1191900.0 25 0 149710.0 + 22187 LPQEIIIKV 9 87 526.8396841164592 1051.6648152997184 2 526.8403198122978 MULTI CID FTMS 0 0 0 15853 1298627.0 1.0 0 0.0 2 Unmodified _LPQEIIIKV_ ENSG00000167384|ENST00000592529|ZNF180;ENST00000585514.5_1_19:44983681-45004353:-|nuORF;nc|ENSG00000167384|Q9UJW8-4|ZNF180;nc|ENSG00000167384|Q9UJW8|ZNF180 87.25819977447905 0.0157581688916699 4 {I|L}PQE{I|L}{I|L}{I|L}KV 9 0 + 96.931 0.0 0.0 9.2169 9.2169 84.637 0.0 0.0 0.0 31.706962271689747 2.632414347745822 2.632414347745822 2.632414347745822 0 2.531234684152075 1.5228787452803376 0.0 1.0629529932484498 + + {I|L}PQE{I|L}{I|L}{I|L}KV;{I|L}PQE{I|L}{I|L}{I|L}VK;{I|L}PQ{I|L}E{I|L}{I|L}KV;{I|L}PQ{I|L}E{I|L}{I|L}VK;{I|L}P[AG]E{I|L}{I|L}{I|L}KV;{I|L}P[AG]E{I|L}{I|L}{I|L}VK;{I|L}P[AG]{I|L}E{I|L}{I|L}KV;{I|L}P[AG]{I|L}E{I|L}{I|L}VK;{I|L}VH[KC]{I|L}{I|L}KV;{I|L}VH[KC]{I|L}{I|L}VK 9.2169;8.9666;8.6494;8.399;8.3414;8.091;7.7738;7.5235;5.5371;5.2868 +;-;-;-;-;-;-;-;-;- + 525 + 1 0.994 75341.5 1.0 10915 4938 15853 HBL1_DMSO_200M_050219_2,15855 HBL1_DMSO_200M_050219_2,15855,LPQEIIIKV True True LPQEIIIKV 83.406304 526.840319812298 6399280.0 15853.0 ENSG00000167384|ENST00000592529|ZNF180;;nc|ENSG00000167384|Q9UJW8-4|ZNF180;;nc|ENSG00000167384|Q9UJW8|ZNF180;;ENST00000585514.5_1_19:44983681-45004353:-|nuORF 5.820930639902751 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15856 83.408 66.0 1486000.0 25 0 277890.0 + 14053 IALFRDVSI 9 91 517.3057265057804 1032.5969000783607 2 517.3066284060478 MULTI CID FTMS 0 0 0 15853 1139423.75 0.4625664983839029 -2 0.1139602661132812 3 Unmodified _IALFRDVSI_ REV__ENSG00000139679|ENST00000620633|LPAR6;REV__ENSG00000147145|ENST00000614823|LPAR4 41.8396318013385 0.0653578398400075 4 {I|L}AVD 4 -1 61.23 0.0 0.0 5.9297 0.0 0.0 0.0 631.3604906548505 631.3604906548505 29.537792944172025 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.0 {I|L}AVD 5.9297 - 155 + 1 0.994 79640.1 1.0 10916 4938 15853 HBL1_DMSO_200M_050219_2,15856 HBL1_DMSO_200M_050219_2,15856,IALFRDVSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15857 83.412 233.0 681200.0 25 0 81965.0 45178 YQLSTNGTAQT 11 135 592.2835279598684 1182.5525029865366 2 592.2836181521416 MULTI CID FTMS 0 0 0 15853 937817.9375 0.8141687989753198 -3 0.21136474609375 4 Unmodified _YQLSTNGTAQT_ ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188 34.93206674587334 0.2904649469012649 4 YQAPD{I|L}DVTP 10 9 84.466 0.0 0.0 7.1427 0.0 0.0 0.0 80.01497064761952 80.01497064761952 52.20699815625124 0.0 0.0 0.0 0 1.5 1.2218487496163564 0.6109243748081782 0.5 YQAPD{I|L}DVTP 7.1427 - 2899 + 1 0.994 123346.7 1.0 10917 4938 15853 HBL1_DMSO_200M_050219_2,15857 HBL1_DMSO_200M_050219_2,15857,YQLSTNGTAQT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15858 83.415 116.0 715200.0 25 0 54232.0 + 19092 LDRWYCASW 9 103 600.2673868410029 1198.5202207488055 2 600.2686035037041 MULTI CID FTMS 0 0 0 15853 457359.90625 0.346243554561467 -3 0.21136474609375 5 Unmodified _LDRWYCASW_ REV__ENSG00000103978|ENST00000389834|TMEM87A;REV__ENST00000562946.5_1_15:42519884-42565596:-|nuORF;REV__ENST00000569075.5_1_15:42525398-42565582:-|nuORF;REV__nc|ENSG00000103978|Q8NBN3-3|TMEM87A 26.020703789607367 0.2001090068861241 4 ECPD[YV]AC(Carbamidomethyl (C)){I|L} 9 -1 31.826 0.0 0.0 2.6554 0.0 0.0 130.1049326253579 0.0 130.1049326253579 0.0 15.627684709413078 0.0 0.0 0 0.7742275032520141 0.0 0.3807196863200844 0.0 ECPD[YV]AC(Carbamidomethyl (C)){I|L} 2.6554 - 470 + 1 0.994 63263.1 1.0 10918 4938 15853 HBL1_DMSO_200M_050219_2,15858 HBL1_DMSO_200M_050219_2,15858,LDRWYCASW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15859 83.421 334.0 891950.0 25 0 69832.0 + -1 LMECSMTSL 9 174 552.2240510014434 1102.4335490696867 2 552.2243530154228 MULTI CID FTMS 0 0 0 15853 437255.53125 1.0 0 0.0 6 Carbamidomethyl (C),2 Oxidation (M) _LM(Oxidation (M))EC(Carbamidomethyl (C))SM(Oxidation (M))TSL_ REV__ENSG00000188419|ENST00000357749|CHM 11.640296217721598 0.521594087909532 4 {I|L}EC(Carbamidomethyl (C)) 3 -1 33.263 0.0 0.0 3.0172 0.0 0.0 0.0 697.2366427057249 697.2366427057249 15.916375079047503 0.0 0.0 0.0 0 0.2059771852360797 0.619788758288394 0.3807196863200844 0.0 {I|L}EC(Carbamidomethyl (C)) 3.0172 - 1019 + 1 0.994 227692.7 1.0 10919 4938 15853 HBL1_DMSO_200M_050219_2,15859 HBL1_DMSO_200M_050219_2,15859,LMECSMTSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15860 83.428 413.0 423640.0 25 0 67226.0 + + 37600 KIMTISTLV 9 167 503.305565878392 1004.596578823584 2 503.3048278689384 MULTI CID FTMS 0 0 0 15853 340122.34375 0.9843499436599056 -1 0.0554275512695312 7 Unmodified _TLKMLSLSI_ ENST00000371621.4_1_20:49177909-49181565:+|nuORF 39.957323273325 0.0756908302845263 4 TWT{I|L}GM{I|L}V 8 -1 49.296 0.0 0.0 4.907 0.0 0.0 85.0900135724625 0.0 85.0900135724625 0.0 23.28470408401905 0.0 0.0 0 0.8807196863200843 0.0 1.546604752857952 0.0 TWT{I|L}GM{I|L}V 4.907 - 1274 1 0.994 130516.2 1.0 10920 4938 15853 HBL1_DMSO_200M_050219_2,15860 HBL1_DMSO_200M_050219_2,15860,TLKMLSLSI False False KIMTISTLV 83.428135 503.304827868938 2615239.25 15853.0 ENST00000371621.4_1_20:49177909-49181565:+|nuORF 5.918791929880778 2.0 False 9.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15861 83.437 497.0 307490.0 25 0 24308.0 + 4852 DGAFGIRI 8 142 424.7352493326072 847.4559457320144 2 424.7362243533134 MULTI CID FTMS 0 0 0 15853 275279.46875 0.7332111334615206 1 -0.0766983032226562 8 Unmodified _DGAFGIRI_ ENSG00000108039|ENST00000502935|XPNPEP1;nc|ENSG00000108039|Q9NQW7-2|XPNPEP1;nc|ENSG00000108039|Q9NQW7-4|XPNPEP1;nc|ENSG00000108039|Q9NQW7|XPNPEP1 34.10243960390752 0.3329570729325616 4 [DG]A{M(Oxidation (M))|F}{I|L}GR{I|L} 8 2 + 62.0 0.0 0.0 7.316 7.316 82.256 0.0 0.0 0.0 20.0 3.802112417116064 3.802112417116064 3.0102999566398125 0 1.0 1.3010299956639813 0.0 0.2614393726401688 [DG]A{M(Oxidation (M))|F}{I|L}GR{I|L};[DG]A{I|L}{M(Oxidation (M))|F}GR{I|L};[DG]A{M(Oxidation (M))|F}{I|L}G{I|L}R;[DG]A{I|L}{M(Oxidation (M))|F}G{I|L}R;[DG]A{M(Oxidation (M))|F}G{I|L}R{I|L};[DG]A{M(Oxidation (M))|F}G{I|L}{I|L}R;[DG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}R{I|L};[DG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}R 7.316;6.9608;6.8673;6.5121;6.4912;6.0426;3.2875;2.8388 -;-;-;-;+;-;-;- + 238 + 1 0.994 121298.8 1.0 10921 4938 15853 HBL1_DMSO_200M_050219_2,15861 HBL1_DMSO_200M_050219_2,15861,DGAFGIRI False True DGAFGIRI 83.436895 424.736224353313 2161410.75 15853.0 nc|ENSG00000108039|Q9NQW7-4|XPNPEP1;;nc|ENSG00000108039|Q9NQW7|XPNPEP1;;nc|ENSG00000108039|Q9NQW7-2|XPNPEP1;;ENSG00000108039|ENST00000502935|XPNPEP1 4.225679636001587 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15862 83.446 533.0 297130.0 25 0 24690.0 21178 LPCRRTLWL 9 134 386.5599914557405 1156.6581449674215 3 386.5599548220634 MULTI CID FTMS 0 0 0 15853 245780.890625 0.7847429092662259 -4 0.4170989990234375 9 Unmodified _LPCRRTLWL_ ENST00000368457.2_1_1:154934129-154934222:-|nuORF 10.150570793230772 0.5619192000662246 4 WP{I|L} 3 7 21.682 0.0 0.0 1.8746 0.0 0.0 742.4143477741325 0.0 742.4143477741325 0.0 5.484550065040278 0.0 0.0 0 0.0 0.0 0.0 0.0 WP{I|L} 1.8746 - 174 1 0.994 135109.9 1.0 10922 4938 15853 HBL1_DMSO_200M_050219_2,15862 HBL1_DMSO_200M_050219_2,15862,LPCRRTLWL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15863 83.454 431.0 172010.0 25 0 14922.0 43355 WPIHNNFDI 9 105 578.283085242803 1154.551617552406 2 578.2825195193291 MULTI CID FTMS 0 0 0 15853 180383.640625 1.0 0 0.0 10 Unmodified _WPIHNNFDI_ ENST00000403865.2_1_13:42644035-42644281:-|nuORF 13.50788311687929 0.4710407108020397 4 [WP]{I|L} 3 6 23.952 0.0 0.0 2.0746 0.0 0.0 0.0 755.308916706956 755.308916706956 7.341736652060785 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + [WP]{I|L} 2.0746 + + 180 1 0.994 61916.7 1.0 10923 4938 15853 HBL1_DMSO_200M_050219_2,15863 HBL1_DMSO_200M_050219_2,15863,WPIHNNFDI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15864 83.462 442.0 295070.0 25 0 21229.0 + 20891 LMQLFDQSL 9 156 547.7801018703875 1093.545650807575 2 547.7800170779228 MULTI CID FTMS 0 0 0 15853 175237.46875 0.8956121211114529 -1 0.0554275512695312 11 Unmodified _LMQLFDQSL_ REV__ENSG00000148120|ENST00000375315|AOPEP;REV__nc|ENSG00000148120|Q8N6M6-2|AOPEP;REV__nc|ENSG00000148120|Q8N6M6-4|AOPEP 34.10243960390752 0.1078313939113124 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PTE{I|L}DY{I|L} 9 -1 + 54.351 0.0 0.0 4.9702 4.9702 79.487 0.0 0.0 0.0 32.92464714820923 6.911225100727592 6.911225100727592 8.10890416387545 0 0.3807196863200844 2.0 0.2742275032520141 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PTE{I|L}DY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PT[NP]HWV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PTE{I|L}[YE]V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PT{[WS]|[C(Carbamidomethyl (C)){I|L}]}RG{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W[YK][WP]A;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PT[NP][EP]PV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W[YK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}N[MT]M{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QGAA{I|L}DY{I|L};{[QG]|[NA]}RTE{I|L}DY{I|L} 4.9702;4.2287;3.9116;3.2505;2.702;2.6944;2.6944;2.6822;2.6735;2.5424 -;-;-;-;-;-;-;-;-;- 1343 + 1 0.994 105627.7 1.0 10924 4938 15853 HBL1_DMSO_200M_050219_2,15864 HBL1_DMSO_200M_050219_2,15864,LMQLFDQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15865 83.471 469.0 151470.0 25 0 12661.0 -1 HPCGEDCVQL 10 103 607.7493697518569 1213.4841865705137 2 608.2502929568291 MULTI CID FTMS 0 0 0 15853 162355.234375 1.0 0 0.0 12 2 Carbamidomethyl (C) _HPC(Carbamidomethyl (C))GEDC(Carbamidomethyl (C))VQL_ ENSG00000124201|ENST00000396105|ZNFX1 6.723162845929126 0.6955379296933136 4 Q{I|L} 2 -1 15.177 0.0 0.0 1.2507 0.0 0.0 954.3296893554732 0.0 954.3296893554732 0.0 4.710040265111564 0.0 0.0 0 0.0 0.0 0.0 0.5 Q{I|L} 1.2507 + + 124 + 1 0.994 59430.2 1.0 10925 4938 15853 HBL1_DMSO_200M_050219_2,15865 HBL1_DMSO_200M_050219_2,15865,HPCGEDCVQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15867 83.475 4.9 10223000.0 25 0 2413000.0 + 20377 LLGPRLVLA 9 56 476.3211434766972 950.6277340201945 2 476.3213378787041 MULTI CID FTMS 0 0 0 15866 11059473.0 0.808736895333417 1 -0.0838394165039062 1 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 39.957323273325 0.0756908302845263 4 {I|L}{I|L}G 3 6 47.619 0.0 0.0 5.0093 0.0 0.0 0.0 664.4148653619749 664.4148653619749 14.444152858125108 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}{I|L}G 5.0093 + + 27 + 1 0.994 45069.9 1.0 10926 4939 15866 HBL1_DMSO_200M_050219_2,15867 HBL1_DMSO_200M_050219_2,15867,LLGPRLVLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15868 83.477 36.0 1269700.0 25 0 185520.0 + 1713 ALPLTEGSH 9 60 462.744003502894 0 462.7440063357353 PEAK CID FTMS 0 0 0 15866 1810262.125 0.6913917199115567 -2 0.1321258544921875 2 Unmodified _ALPLTEGSH_ REV__ENSG00000183117|ENST00000635120|CSMD1;REV__ENST00000523387.5_1_8:2986336-3141840:-|nuORF;REV__ENST00000523488.5_1_8:3008913-3253839:-|nuORF;REV__nc|ENSG00000183117|Q96PZ7-2|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-3|CSMD1;REV__nc|ENSG00000183117|Q96PZ7-4|CSMD1 11.640296217721598 0.2934555500198502 4 P{I|L} 2 -1 12.831 0.0 0.0 1.3894 0.0 0.0 184.120448238782 526.1903170221311 710.3107652609131 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L} 1.3894 + + 7 + 1 0.994 38425.4 1.0 10927 4939 15866 HBL1_DMSO_200M_050219_2,15868 HBL1_DMSO_200M_050219_2,15868,ALPLTEGSH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15869 83.478 7.8 7120100.0 25 0 800110.0 + 9852 FPFGKIGTV 9 73 483.2765192074866 964.5384854817733 2 483.2766296267509 MULTI CID FTMS 0 0 0 15866 6814965.0 0.9456075160573724 -4 0.2880630493164062 3 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 41.8396318013385 0.0653578398400075 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V]{M(Oxidation (M))|F}VP{M(Oxidation (M))|F} 8 7 + 41.375 0.0 0.0 4.2896 4.2896 67.76 0.0 0.0 0.0 4.542425094393245 1.4928876664371415 1.4928876664371415 1.4928876664371415 0 0.5 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V]{M(Oxidation (M))|F}VP{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;[KG]{M(Oxidation (M))|F}{I|L}GTVP{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V]V{M(Oxidation (M))|F}P{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]{I|L}[Y{I|L}]Q;{M(Oxidation (M))|F}[{I|L}T]TG{I|L}[WK];[KG]{M(Oxidation (M))|F}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V]{M(Oxidation (M))|F}[KS]Q;[KG]{M(Oxidation (M))|F}{I|L}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F} 4.2896;4.1349;3.8187;3.795;3.3824;3.1998;3.0744;2.864;2.7873;2.5519 -;-;-;-;-;-;-;-;-;- 311 1 0.994 49167.8 1.0 10928 4939 15866 HBL1_DMSO_200M_050219_2,15869 HBL1_DMSO_200M_050219_2,15869,FPFGKIGTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15870 83.479 16.0 3154600.0 25 0 736660.0 + 41857 VPYLVGQVV 9 58 487.28940627416745 972.5642596151348 2 487.2896606326103 MULTI CID FTMS 0 0 0 15866 3253594.75 0.5073333931585196 -2 0.1321258544921875 4 Unmodified _VPYLVGQVV_ ENSG00000126088|ENST00000246337|UROD;ENST00000494399.5_1_1:45478966-45479784:+|nuORF 34.18733598223924 0.1073653526364521 4 [VP]Y{I|L}VGQVV 9 0 + 44.848 0.0 0.0 4.6113 4.6113 71.896 0.0 0.0 0.0 3.187587626244124 7.944539621753535 3.187587626244124 3.0102999566398125 0 0.5796896906561032 0.9208187539523752 0.0 0.0 + + [VP]Y{I|L}VGQVV;[VP]Y{I|L}GVQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV;[VP]Y{I|L}GQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}VGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGVQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GVQVV;[VP]Y{I|L}VG[AG]VV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GQVVV 4.6113;4.3018;4.2836;4.1207;3.9741;3.9741;3.793;3.6645;3.6645;3.4835 +;-;-;-;-;-;-;-;-;- + 419 1 0.994 45156.6 1.0 10929 4939 15866 HBL1_DMSO_200M_050219_2,15870 HBL1_DMSO_200M_050219_2,15870,VPYLVGQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15871 83.48 46.0 793060.0 25 0 135890.0 -1 LSTYPSLC 8 50 470.7263908802107 939.4382288272216 2 470.7264587283134 MULTI CID FTMS 0 0 0 15866 1057560.875 0.332434253908412 -2 0.1321258544921875 5 Carbamidomethyl (C) _LSTYPSLC(Carbamidomethyl (C))_ ENST00000544158.2_1_19:36259262-36259406:+|nuORF 13.50788311687929 0.7113601687236069 4 {I|L}S 2 -1 42.034 0.0 0.0 4.4744 0.0 0.0 0.0 736.3017962756932 736.3017962756932 37.42992819099939 0.0 0.0 0.0 0 0.3807196863200844 1.3010299956639813 0.4247425010840047 0.0 {I|L}S 4.4744 + + 6 + 1 0.994 35649.5 1.0 10930 4939 15866 HBL1_DMSO_200M_050219_2,15871 HBL1_DMSO_200M_050219_2,15871,LSTYPSLC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15872 83.482 59.0 539800.0 25 0 101820.0 + -1 ALLDFTCT 8 52 314.15352150719866 939.438735121796 3 314.1532165408134 MULTI CID FTMS 0 0 0 15866 870626.5 0.3080335270808547 -2 0.1321258544921875 6 Carbamidomethyl (C) _ALLDFTC(Carbamidomethyl (C))T_ REV__ENST00000219478.10_1_16:4800958-4801270:-|nuORF 6.723162845929126 0.7835230281555235 4 [{I|L}A]{I|L} 3 -1 30.458 0.0 0.0 3.2421 0.0 0.0 0.0 639.2113981905442 639.2113981905442 23.46787486224656 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]{I|L} 3.2421 + + 9 + 1 0.994 33361.3 1.0 10931 4939 15866 HBL1_DMSO_200M_050219_2,15872 HBL1_DMSO_200M_050219_2,15872,ALLDFTCT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15873 83.486 257.0 529690.0 25 0 43595.0 + 31520 RQIDQFLVVA 10 84 594.8418400258062 1187.6691271184122 2 594.8420287966728 MULTI CID FTMS 0 0 0 15866 842885.0625 0.7856122593661561 2 -0.199188232421875 7 Unmodified _RQIDQFLVVA_ ENSG00000057935|ENST00000405094|MTA3;ENSG00000149480|ENST00000278823|MTA2;ENST00000531261.1_1_11:62365080-62365595:-|nuORF;nc|ENSG00000057935|Q9BTC8-2|MTA3;nc|ENSG00000149480|O94776-2|MTA2 18.373094154950223 0.5392593366289069 4 [W{I|L}]{[NV]|[RG]}Q{M(Oxidation (M))|F}{I|L}VAV 10 6 + 60.084 0.0 0.0 5.059 5.059 77.014 0.0 0.0 0.0 5.228787452803374 7.899517211847126 5.228787452803374 5.228787452803374 0 0.9124379954164592 2.0 0.0 0.3054621874040891 [W{I|L}]{[NV]|[RG]}Q{M(Oxidation (M))|F}{I|L}VAV;VV[WQ]Q{M(Oxidation (M))|F}{I|L}VAV;[W{I|L}]{[NV]|[RG]}[AG]{M(Oxidation (M))|F}{I|L}VAV;[W{I|L}]{[NV]|[RG]}Q{M(Oxidation (M))|F}V{I|L}AV;VV[WQ][AG]{M(Oxidation (M))|F}{I|L}VAV;VV[WQ]Q{M(Oxidation (M))|F}V{I|L}AV;[W{I|L}]{[NV]|[RG]}[AG]{M(Oxidation (M))|F}V{I|L}AV;[{I|L}V]{[WN]|[YH]}Q{M(Oxidation (M))|F}{I|L}VAV;VV[WQ][AG]{M(Oxidation (M))|F}V{I|L}AV;[{I|L}V]{[WN]|[YH]}[AG]{M(Oxidation (M))|F}{I|L}VAV 5.059;4.6187;4.2873;3.919;3.8471;3.4787;3.1474;2.9347;2.7071;2.1631 -;-;-;-;-;-;-;-;-;- 131 1 0.994 107915.2 1.0 10932 4939 15866 HBL1_DMSO_200M_050219_2,15873 HBL1_DMSO_200M_050219_2,15873,RQIDQFLVVA False True RQIDQFLVVA 83.486468 594.842028796673 8469437.0 15866.0 nc|ENSG00000057935|Q9BTC8-2|MTA3;;ENST00000531261.1_1_11:62365080-62365595:-|nuORF;;ENSG00000149480|ENST00000278823|MTA2;;nc|ENSG00000149480|O94776-2|MTA2;;ENSG00000057935|ENST00000405094|MTA3 5.5200605392456055 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15874 83.488 84.0 620460.0 25 0 103750.0 + 34129 SLLSHVEQL 9 80 513.2844440045574 1024.5543350759149 2 513.2845336794853 MULTI CID FTMS 0 0 0 15866 554304.9375 0.4702985123855802 3 -0.2998580932617187 8 Unmodified _SLLSHVEQL_ ENSG00000116670|ENST00000376692|MAD2L2;ENST00000376664.10_1_1:11735929-11741152:-|nuORF 66.45667989310934 0.0225072657982126 4 {[TV]|[{I|L}S]}HVTVEQ{I|L} 9 3 + 84.703 0.0 0.0 8.2673 8.2673 92.307 0.0 0.0 0.0 20.737862141609185 67.07834387816234 20.737862141609185 9.208187539523747 0 1.2059771852360797 2.0 0.7059771852360797 0.0 {[TV]|[{I|L}S]}HVTVEQ{I|L};{[TV]|[{I|L}S]}HVTVE[AG]{I|L};{[TV]|[{I|L}S]}HVE{[TV]|[{I|L}S]}Q{I|L};{[TV]|[{I|L}S]}HVEQ{[TV]|[{I|L}S]}{I|L};{[TV]|[{I|L}S]}HD{I|L}{[TV]|[{I|L}S]}Q{I|L};{[TV]|[{I|L}S]}HD{I|L}Q{[TV]|[{I|L}S]}{I|L};{[TV]|[{I|L}S]}HVE{[TV]|[{I|L}S]}[AG]{I|L};{[TV]|[{I|L}S]}HVE[AG]{[TV]|[{I|L}S]}{I|L};[HS]{I|L}VTVEQ{I|L};[HV]TVTVEQ{I|L} 8.2673;7.3685;6.7073;6.6837;6.1197;6.0961;5.8086;5.7849;5.4388;5.3615 -;-;-;-;-;-;-;-;-;- 841 1 0.994 48074.3 1.0 10933 4939 15866 HBL1_DMSO_200M_050219_2,15874 HBL1_DMSO_200M_050219_2,15874,SLLSHVEQL True True SLLSHVEQL 83.488372 513.284533679485 18113000.0 15866.0 ENST00000376664.10_1_1:11735929-11741152:-|nuORF;;ENSG00000116670|ENST00000376692|MAD2L2 7.1838310559590655 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15875 83.49 95.0 880540.0 25 0 64615.0 -1 YIISSCYTL 9 104 560.2753424091618 1118.5361318851235 2 560.2731201052666 MULTI CID FTMS 0 0 0 15866 497987.40625 0.756994778238054 -2 0.1321258544921875 9 Carbamidomethyl (C) _YIISSC(Carbamidomethyl (C))YTL_ ENSG00000143324|ENST00000367590|XPR1;ENST00000498177.1_1_1:180805815-180843079:+|nuORF;nc|ENSG00000143324|Q9UBH6-2|XPR1 11.640296217721598 0.521594087909532 4 YV{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}A]TY 9 -1 + 24.23 0.0 0.0 2.1662 2.1662 69.136 0.0 0.0 0.0 2.838096733120281 3.261066317631961 2.838096733120281 5.351132016973494 0 0.0 0.0 0.0 0.3807196863200844 YV{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}A]TY;YV{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L};D{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}A]TY;D{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L};YV[C(Carbamidomethyl (C))H][WE]{I|L}{I|L};C(Carbamidomethyl (C)){I|L}{[MG]|[TS]}Y[{I|L}V]TY;[MN]Y{[ES]|[DT]|[{I|L}C]}[{I|L}V]TY;{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}[KT]E[WQ];[QA]{[{M(Oxidation (M))|F}D]|MM}Y[{I|L}V]TY;[MN][WQ][WE]{I|L}{I|L} 2.1662;1.6878;1.5567;1.0783;0.68166;0.45327;0.42532;0.19042;0.13057;0.036649 -;-;-;-;-;-;-;-;-;- 299 + 1 0.994 65971.6 1.0 10934 4939 15866 HBL1_DMSO_200M_050219_2,15875 HBL1_DMSO_200M_050219_2,15875,YIISSCYTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15876 83.498 437.0 442530.0 25 0 60378.0 + -1 LAEMEMSL 8 170 478.2094409348333 954.4043289364666 2 478.2091552615166 MULTI CID FTMS 0 0 0 15866 345904.75 0.7574896264736689 16 -1.9240188598632808 10 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 14.581692164780916 0.6954967302934248 4 [{I|L}A]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))SR 7 -1 19.658 0.0 0.0 2.0597 0.0 0.0 0.0 70.00680189556581 70.00680189556581 5.678732196748584 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 [{I|L}A]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))SR 2.0597 - 501 1 0.994 147176.0 1.0 10935 4939 15866 HBL1_DMSO_200M_050219_2,15876 HBL1_DMSO_200M_050219_2,15876,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15877 83.506 454.0 229680.0 25 0 45044.0 + 16293 IWKLYALHREI 11 123 721.4213010139044 1440.8280490946088 2 721.4207031130791 MULTI CID FTMS 0 0 0 15866 277388.1875 0.8220736850849897 2 -0.199188232421875 11 Unmodified _IWKLYALHREI_ REV__ENSG00000135249|ENST00000257700|RINT1 2.9952420565917617 0.861016188266951 4 NSQ 3 -1 8.2933 0.0 0.0 0.57559 0.0 0.0 737.4997659721017 371.1720064752563 1108.671772447358 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 NSQ 0.57559 - 183 + 1 0.994 85997.0 1.0 10936 4939 15866 HBL1_DMSO_200M_050219_2,15877 HBL1_DMSO_200M_050219_2,15877,IWKLYALHREI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15878 83.517 600.0 409020.0 25 0 57801.0 + 42996 VVVHEDARS 9 83 337.84473695321105 1010.5123814598333 3 337.8444702029228 MULTI CID FTMS 0 0 0 15866 216669.921875 0.3601738938455345 -2 0.1321258544921875 12 Unmodified _VVVHEDARS_ REV__ENST00000576863.1_1_16:3188364-3191345:+|nuORF 13.90604991867851 0.4602628045680013 4 VVVQ 4 -1 41.687 0.0 0.0 4.1254 0.0 0.0 0.0 582.2267550104124 582.2267550104124 30.718173767286657 0.0 0.0 0.0 0 0.2134679910804404 0.0 0.0 0.7614393726401688 VVVQ 4.1254 - 50 + 1 0.994 201702.5 1.0 10937 4939 15866 HBL1_DMSO_200M_050219_2,15878 HBL1_DMSO_200M_050219_2,15878,VVVHEDARS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15879 83.526 500.0 372220.0 25 0 34394.0 + 8657 EVFPEFAAA 9 158 490.7401936907113 0 490.7406188845634 PEAK CID FTMS 0 0 0 15866 180758.90625 1.0 0 0.0 13 Unmodified _EVFPEFAAA_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT 23.1484247019978 0.1725298825155634 4 V{I|L} 2 8 9.464 0.0 0.0 0.96624 0.0 0.0 217.10400345100143 547.1858812890056 764.289884740007 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L} 0.96624 - 389 + 1 0.994 142404.7 1.0 10938 4939 15866 HBL1_DMSO_200M_050219_2,15879 HBL1_DMSO_200M_050219_2,15879,EVFPEFAAA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15880 83.536 610.0 368620.0 25 0 56153.0 + 22884 LSCAGINK 8 139 403.2158195559984 804.4170861787968 2 403.2154724001884 MULTI CID FTMS 0 0 0 15866 190549.0625 0.629183350539585 -1 0.0766983032226562 14 Unmodified _LSCAGINK_ REV__ENSG00000174145|ENST00000309447|NWD2 18.13498045792455 0.6430038125133779 4 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}E{I|L}H 6 -1 + 53.492 0.0 0.0 6.6498 6.6498 82.953 0.0 0.0 0.0 11.972397382812652 4.771212547196626 4.771212547196626 4.771212547196626 0 0.3054621874040891 0.0 0.7742275032520141 0.0 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}E{I|L}H;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}EH{I|L};{[DS]|[MA]|[CV]|TT}TQ{I|L}{I|L}E;[PS]{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}E;{[RE]|[WV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}E;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAAA{I|L}E;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[NV]|[RG]}{I|L}E;{[DS]|[MA]|[CV]|TT}T[AG]{I|L}{I|L}E;{[DS]|[MA]|[CV]|TT}[WR]{I|L}E;[PS]{M(Oxidation (M))|F}{[NV]|[RG]}{I|L}E 6.6498;6.0567;3.2674;2.6379;2.4321;2.2414;2.1701;2.1074;1.8229;1.7959 -;-;-;-;-;-;-;-;-;- 180 + 1 0.994 176224.5 1.0 10939 4939 15866 HBL1_DMSO_200M_050219_2,15880 HBL1_DMSO_200M_050219_2,15880,LSCAGINK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15881 83.545 492.0 216780.0 25 0 16508.0 + 33462 SIFPDSGHFNV 11 126 610.2915838670136 0 610.2925903201103 PEAK CID FTMS 0 0 0 15866 148485.0625 0.8813631191818525 -1 0.0766983032226562 15 Unmodified _SIFPDSGHFNV_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 30.7034409873982 0.2208360222321843 4 {M(Oxidation (M))|F}PD 3 8 20.974 0.0 0.0 1.7212 0.0 0.0 200.11413813343364 656.283025871367 856.3971640048007 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.3494850021680094 0.0 + {M(Oxidation (M))|F}PD 1.7212 + + 191 + 1 0.994 81583.0 1.0 10940 4939 15866 HBL1_DMSO_200M_050219_2,15881 HBL1_DMSO_200M_050219_2,15881,SIFPDSGHFNV False True SIFPDSGHFNV 83.544965 610.29259032011 2349282.75 15866.0 nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 7.192239284515381 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15882 83.555 508.0 140260.0 25 0 13944.0 + -1 YLTEQLVAIYH 11 110 675.8595570451869 0 675.8600952029228 PEAK CID FTMS 0 0 0 15866 155515.03125 1.0 0 0.0 16 Oxidation (M) _LDM(Oxidation (M))IIHFVSLF_ ENST00000542112.5_1_11:62621512-62623345:-|nuORF 13.042465956692816 0.4221659143281722 4 Q{I|L}VA{I|L}Y 6 -1 38.761 0.0 0.0 2.8718 0.0 0.0 507.240683539406 152.0471590631469 659.2878426025529 0.0 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.3494850021680094 Q{I|L}VA{I|L}Y 2.8718 - 233 + 1 0.994 57106.8 1.0 10941 4939 15866 HBL1_DMSO_200M_050219_2,15882 HBL1_DMSO_200M_050219_2,15882,LDMIIHFVSLF False False YLTEQLVAIYH 83.555107 675.860095202923 1727873.625 15866.0 ENST00000542112.5_1_11:62621512-62623345:-|nuORF 6.762096563975017 2.0 False 11.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15884 83.559 0.54 109450000.0 25 0 20312000.0 + 4654 DAYVLPKLY 9 71 541.3001215762505 1080.585690219301 2 541.3008911013603 MULTI CID FTMS 0 0 0 15883 86808344.0 0.6065334195180127 3 -0.35491943359375 1 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 43.85829265575387 0.0542763391141878 4 {[DA]|[EG]}YV{I|L}PK{I|L}Y 9 0 + 64.319 0.0 0.0 5.9523 5.9523 90.974 0.0 0.0 0.0 42.10077508221467 11.61159286695316 11.61159286695316 64.31926257837823 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L}Y 5.9523 + + 87 + 1 0.985 51076.0 1.0 10942 4940 15883 HBL1_DMSO_200M_050219_2,15884 HBL1_DMSO_200M_050219_2,15884,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15885 83.56 8.4 3629600.0 25 0 370560.0 + 24300 MAYPDLNEI 9 58 533.2502681592617 1064.4859833853234 2 533.2506591677666 MULTI CID FTMS 0 0 0 15883 5185702.5 0.3436338736147334 4 -0.4728240966796875 2 Unmodified _MAYPDLNEI_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 18.13498045792455 0.3457906370836843 4 {[DS]|[MA]|[CV]|TT}YW 4 6 26.198 0.0 0.0 2.4611 0.0 0.0 0.0 510.23778937581096 510.23778937581096 8.750612633917001 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[DS]|[MA]|[CV]|TT}YW 2.4611 - 62 1 0.985 29598.5 1.0 10943 4940 15883 HBL1_DMSO_200M_050219_2,15885 HBL1_DMSO_200M_050219_2,15885,MAYPDLNEI False True MAYPDLNEI 83.560459 533.250659167767 388720080.0 15883.0 chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;;nc|ENSG00000079263|Q13342-5|SP140;;nc|ENSG00000079263|Q13342-2|SP140;;chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-6|SP140;;nc|ENSG00000079263|Q13342-4|SP140;;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;;ENSG00000079263|ENST00000392045|SP140;;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;;nc|ENSG00000079263|Q13342-3|SP140 7.239716370900472 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15886 83.562 7.9 6353900.0 25 0 892040.0 + 1629 ALMAAPLSL 9 81 451.75274496202985 901.4909369908596 2 451.7529785037041 MULTI CID FTMS 0 0 0 15883 7273708.5 0.5600578729128942 25 -2.844696044921875 3 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS 6 4 49.882 0.0 0.0 5.5333 0.0 0.0 0.0 312.1926027734606 312.1926027734606 30.79714510320281 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS 5.5333 - 266 1 0.985 47166.0 1.0 10944 4940 15883 HBL1_DMSO_200M_050219_2,15886 HBL1_DMSO_200M_050219_2,15886,ALMAAPLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15887 83.563 12.0 2826900.0 25 0 526770.0 + 17886 KQMEQISQFL 10 65 626.3235447646232 1250.6325365960463 2 626.3242675662041 MULTI CID FTMS 0 0 0 15883 3850345.5 0.7244575428830974 2 -0.2160186767578125 4 Unmodified _KQMEQISQFL_ ENSG00000144834|ENST00000478951|TAGLN3;ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 53.832793166522166 0.0576554960245129 4 D{I|L}[C(Carbamidomethyl (C))R]{I|L}SQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 5 50.524 0.0 0.0 4.0399 0.0 0.0 100.06446273017734 0.0 100.06446273017734 0.0 35.92023425729828 0.0 0.0 0 0.5 0.0 1.2614393726401687 1.2302046884880935 D{I|L}[C(Carbamidomethyl (C))R]{I|L}SQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.0399 - 162 1 0.985 33986.5 1.0 10945 4940 15883 HBL1_DMSO_200M_050219_2,15887 HBL1_DMSO_200M_050219_2,15887,KQMEQISQFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15888 83.564 20.0 2602800.0 25 0 291770.0 + 8211 EPTWSVLQL 9 81 536.7895884700495 1071.5646240068988 2 536.7897827029228 MULTI CID FTMS 0 0 0 15883 2552657.5 0.8095446802242102 2 -0.2160186767578125 5 Unmodified _EPTWSVLQL_ REV__ENST00000375960.6_1_9:88969206-88969242:-|nuORF 23.1484247019978 0.2366544122328345 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKM{I|L}E 7 -1 40.008 0.0 0.0 3.7337 0.0 0.0 0.0 195.0781954401 195.0781954401 21.252794248470224 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.7059771852360797 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KKM{I|L}E 3.7337 - 502 + 1 0.985 48826.6 1.0 10946 4940 15883 HBL1_DMSO_200M_050219_2,15888 HBL1_DMSO_200M_050219_2,15888,EPTWSVLQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15889 83.565 22.0 2241600.0 25 0 254500.0 + 44694 YPFKPPMI 8 67 496.7675405711997 991.5205282091994 2 496.7678405642509 MULTI CID FTMS 0 0 0 15883 1872356.625 0.251261553716453 4 -0.4728240966796875 6 Unmodified _YPFKPPMI_ ENSG00000156587|ENST00000287156|UBE2L6 42.96799951952854 0.1846367511955703 4 YP{M(Oxidation (M))|F}KPPM{I|L} 8 0 + 66.892 0.0 0.0 6.7464 6.7464 92.718 0.0 0.0 0.0 46.077541258518266 11.146387799684874 11.146387799684874 25.28782221775522 0 0.3807196863200844 2.0 0.0 0.0 + + YP{M(Oxidation (M))|F}KPPM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V]Q{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[YV]PPK{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V][AG]{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6.7464;4.196;2.6889;2.2592;1.7547 +;-;-;-;- + 73 + 1 0.985 44037.1 1.0 10947 4940 15883 HBL1_DMSO_200M_050219_2,15889 HBL1_DMSO_200M_050219_2,15889,YPFKPPMI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15890 83.566 38.0 1262000.0 25 0 180090.0 + 1563 ALLDRIVSV 9 57 493.3061166177448 984.5976803022896 2 493.3057739138603 MULTI CID FTMS 0 0 0 15883 1417344.25 0.401474458355336 2 -0.2160186767578125 7 Unmodified _ALLDRIVSV_ ENSG00000155561|ENST00000285968|NUP205 34.93206674587334 0.1032771302489716 4 [{I|L}A]{I|L}D 4 5 38.5 0.0 0.0 3.9102 0.0 0.0 0.0 569.3431490533811 569.3431490533811 13.182503180159344 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + [{I|L}A]{I|L}D 3.9102 + + 25 + 1 0.985 43991.3 1.0 10948 4940 15883 HBL1_DMSO_200M_050219_2,15890 HBL1_DMSO_200M_050219_2,15890,ALLDRIVSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15891 83.568 66.0 805360.0 25 0 65102.0 + 22573 LPWTAEQVV 9 88 521.7817312608888 1041.5489095885775 2 521.7822753787041 MULTI CID FTMS 0 0 0 15883 610631.4375 0.0255071419035535 7 -0.7959747314453125 8 Unmodified _LPWTAEQVV_ ENSG00000175216|ENST00000529230|CKAP5;ENST00000528593.1_1_11:46804822-46806223:-|nuORF;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 21.74664581756881 0.2544899275067181 4 [{I|L}P][MN]{I|L}EQVV 9 3 + 30.045 0.0 0.0 2.8846 2.8846 45.676 0.0 0.0 0.0 8.080371765640418 9.889917747712648 8.080371765640418 0.0 0 0.5484550065040282 1.3979400086720375 0.0 0.0 [{I|L}P][MN]{I|L}EQVV;[{I|L}P][MN]E{I|L}QVV;[AG]NNV{I|L}EQVV;[AG]NNVE{I|L}QVV;[{I|L}P][MN]E{I|L}[AG]VV;[{I|L}P][MN]{I|L}E[AG]VV;{[QN]|[E{I|L}]|[KN]}NVE{I|L}QVV;{[QN]|[E{I|L}]|[KN]}NV{I|L}EQVV;[AG]NNVE{I|L}[AG]VV;[AG]NNV{I|L}E[AG]VV 2.8846;2.8846;2.1088;2.1088;2.0005;2.0005;1.7268;1.7268;1.2289;1.2289 -;-;-;-;-;-;-;-;-;- 218 1 0.985 52188.5 1.0 10949 4940 15883 HBL1_DMSO_200M_050219_2,15891 HBL1_DMSO_200M_050219_2,15891,LPWTAEQVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15892 83.571 147.0 854150.0 25 0 139780.0 + 9922 FPFYGKPMRI 10 74 419.2266078236951 1254.6579940712852 3 419.2268554568291 MULTI CID FTMS 0 0 0 15883 557385.6875 0.1134069495382068 12 -1.4300079345703125 9 Unmodified _FPFYGKPMRI_ ENSG00000125870|ENST00000246071|SNRPB2 32.78568957990786 0.2337485590374503 4 PW{I|L}KGY{M(Oxidation (M))|F}PE 9 8 67.612 0.0 0.0 5.3889 0.0 0.0 119.07412917304843 0.0 119.07412917304843 0.0 45.39381281052492 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PW{I|L}KGY{M(Oxidation (M))|F}PE 5.3889 - 602 1 0.985 103806.7 1.0 10950 4940 15883 HBL1_DMSO_200M_050219_2,15892 HBL1_DMSO_200M_050219_2,15892,FPFYGKPMRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15893 83.578 394.0 738020.0 25 0 63879.0 + 10783 FYPPPRITL 9 174 552.3159507051236 1102.617348477047 2 552.3164550662041 MULTI CID FTMS 0 0 0 15883 415393.6875 0.5733034612480339 -7 0.620391845703125 10 Unmodified _FYPPPRITL_ ENSG00000102221|ENST00000614628|JADE3 34.40172386719151 0.1061884637610825 4 [Y{M(Oxidation (M))|F}]PPP[R{I|L}]T{I|L} 9 0 + 26.897 0.0 0.0 2.4394 2.4394 78.069 0.0 0.0 0.0 13.798537247967538 4.947018467365616 4.947018467365616 23.78144697160132 0 0.4247425010840047 0.0 0.4423877696554315 0.5941876774005248 + + [Y{M(Oxidation (M))|F}]PPP[R{I|L}]T{I|L};[QA][HA]PP[R{I|L}]T{I|L};[Y{M(Oxidation (M))|F}][YK][R{I|L}]T{I|L} 2.4394;0.2826;0.1625 +;-;- + 943 + 1 0.985 225147.3 1.0 10951 4940 15883 HBL1_DMSO_200M_050219_2,15893 HBL1_DMSO_200M_050219_2,15893,FYPPPRITL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15894 83.586 437.0 526760.0 25 0 54548.0 + 1254 AILEKMPLV 9 168 507.30605433023067 1012.5975557272614 2 507.3070251345634 MULTI CID FTMS 0 0 0 15883 373000.4375 0.7699701417592326 1 -0.1153488159179687 11 Unmodified _AILEKMPLV_ ENSG00000213983|ENST00000397120|AP1G2;ENST00000460049.6_1_14:24028960-24033376:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF 82.5293158979368 0.0169039238599547 4 [{I|L}A]{I|L}EKM{I|L}PV 9 2 + 76.102 0.0 0.0 7.5156 7.5156 81.171 0.0 0.0 0.0 15.607551024295724 6.443481302951284 6.443481302951284 2.156818820794939 0 2.129854553292708 2.0 0.2742275032520141 0.0 [{I|L}A]{I|L}EKM{I|L}PV;[{I|L}A]{I|L}EKMP{I|L}V;[{I|L}A]{I|L}EKMPV{I|L};[{I|L}A]{I|L}EKM{I|L}VP;[{I|L}A]{I|L}[{I|L}T]{[CA]|SS}{I|L}PV;[{I|L}A]{I|L}[{I|L}T]{[CA]|SS}P{I|L}V;[{I|L}A]{I|L}EK{[NV]|[RG]}QV;[{I|L}A][VS]M[{I|L}A]P{I|L}V;[{I|L}A]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[{I|L}A]P{I|L}V;[{I|L}A]{I|L}[{I|L}T]{[CA]|SS}PV{I|L} 7.5156;7.3026;6.8792;6.2281;5.3247;5.1117;5.0352;4.8145;4.7627;4.6884 -;+;-;-;-;-;-;-;-;- + 5225 + 1 0.985 181863.2 1.0 10952 4940 15883 HBL1_DMSO_200M_050219_2,15894 HBL1_DMSO_200M_050219_2,15894,AILEKMPLV True True AILEKMPLV 83.585703 507.307025134563 4510429.5 15883.0 ENSG00000213983|ENST00000397120|AP1G2;;ENST00000535852.6_1_14:24028960-24035624:-|nuORF;;ENST00000460049.6_1_14:24028960-24033376:-|nuORF 6.264784018198649 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15895 83.594 472.0 661310.0 25 0 70179.0 + 11751 GLILRSECLC 10 186 553.7871916122181 1105.559830291236 2 553.7876464724541 MULTI CID FTMS 0 0 0 15883 262656.28125 0.7489487540898122 -1 0.0838394165039062 12 Unmodified _GLILRSECLC_ ENST00000547879.5_1_14:75278435-75279384:+|nuORF 29.081581746732265 0.3152867722954398 4 {[VA]|[{I|L}G]}{I|L}DC{I|L}QYD 9 7 72.634 0.0 0.0 6.5699 0.0 0.0 0.0 82.0670641534789 82.0670641534789 27.34616470306024 0.0 0.0 0.0 0 0.6549471895720985 2.0 1.2034021960761268 0.566901560044258 {[VA]|[{I|L}G]}{I|L}DC{I|L}QYD 6.5699 - 10254 + 1 0.985 234310.6 1.0 10953 4940 15883 HBL1_DMSO_200M_050219_2,15895 HBL1_DMSO_200M_050219_2,15895,GLILRSECLC False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15896 83.604 567.0 226420.0 25 0 13356.0 28269 PRGHGGGL 8 116 750.4033738555652 749.3960973889651 1 750.4031249880791 MULTI CID FTMS 0 0 0 15883 171653.34375 0.3845901843193492 2 -0.2160186767578125 13 Unmodified _PRGHGGGL_ ENST00000527357.5_1_11:799959-801918:-|nuORF;ENST00000534525.5_1_11:799959-803120:-|nuORF;nc|ENSG00000177595|Q9HB75-5|PIDD1;nc|ENSG00000177595|Q9HB75-6|PIDD1 5.760428011301431 0.7893668129297577 4 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TQ{I|L} 6 7 + 63.681 0.0 0.0 8.4977 8.4977 91.437 0.0 0.0 0.0 9.005149978319906 14.69273760456403 9.005149978319906 9.005149978319906 0 1.3737125054200234 1.2218487496163564 1.5356668758921828 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TQ{I|L};[{M(Oxidation (M))|F}E]{I|L}TQ{I|L};[{I|L}T]Q{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}T[AG]{I|L};[{I|L}T]E{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}T{M(Oxidation (M))|F}Q{I|L};[Q{I|L}]T{M(Oxidation (M))|F}E{I|L};{[YD]|[{M(Oxidation (M))|F}M]}V{I|L}Q{I|L};[{M(Oxidation (M))|F}E]T{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}T{M(Oxidation (M))|F}[AG]{I|L} 8.4977;7.296;7.2593;7.2406;7.2065;7.1929;7.0177;6.9813;6.7633;5.9358 -;-;-;-;-;-;-;-;-;- 779 1 0.985 93514.8 1.0 10954 4940 15883 HBL1_DMSO_200M_050219_2,15896 HBL1_DMSO_200M_050219_2,15896,PRGHGGGL False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 15897 83.613 531.0 300090.0 25 0 27268.0 + 33564 SILSKDGVLYV 11 154 597.3436073096462 1192.6726616860924 2 597.3441039919853 MULTI CID FTMS 0 0 0 15883 162042.375 0.3954187345608545 -2 0.1605377197265625 14 Unmodified _SILSKDGVLYV_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87398353-87423749:+|nuORF 34.221707139014875 0.3014076866608453 4 {[TV]|[{I|L}S]}[PS]KS{I|L}S{I|L}YV 11 4 + 67.937 0.0 0.0 5.6962 5.6962 74.247 0.0 0.0 0.0 3.0102999566398125 9.797513843253585 3.0102999566398125 1.7731749024395924 0 1.1677353201839438 1.6989700043360187 0.9049471895720984 0.0 {[TV]|[{I|L}S]}[PS]KS{I|L}S{I|L}YV;{[TV]|[{I|L}S]}{I|L}[QA]S{I|L}S{I|L}YV;{I|L}{I|L}S[QA]S{I|L}S{I|L}YV;{[TV]|[{I|L}S]}KDR{I|L}S{I|L}YV;{[TV]|[{I|L}S]}K[PS]S{I|L}S{I|L}YV;{[TV]|[{I|L}S]}[QA]{I|L}S{I|L}S{I|L}YV;{[TV]|[{I|L}S]}[QA]S{I|L}{I|L}S{I|L}YV;{[TV]|[{I|L}S]}KD[VG]{I|L}S{I|L}YV;{[DA]|[EG]}VVKS{I|L}S{I|L}YV;{[TV]|[{I|L}S]}KDR{I|L}Y[W{I|L}] 5.6962;5.5476;5.4438;4.9074;4.8961;4.8231;4.423;4.139;3.7383;3.5463 -;-;-;-;-;-;-;-;-;- 4859 1 0.985 120640.7 1.0 10955 4940 15883 HBL1_DMSO_200M_050219_2,15897 HBL1_DMSO_200M_050219_2,15897,SILSKDGVLYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15898 83.625 679.0 238090.0 25 0 55814.0 36630 TASKISLLAFL 11 117 388.5714475333833 1162.69251320035 3 388.5717040896416 MULTI CID FTMS 0 0 0 15883 168979.140625 0.4080284142962493 -2 0.1605377197265625 15 Unmodified _TASKISLLAFL_ ENST00000479871.1_1_9:116169653-116169776:-|nuORF 2.9952420565917617 0.861016188266951 4 {I|L} 1 10 10.278 0.0 0.0 0.88395 0.0 0.0 1031.597494745075 0.0 1031.597494745075 0.0 5.67349286948728 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.88395 + + 16 + 1 0.985 141173.3 1.0 10956 4940 15883 HBL1_DMSO_200M_050219_2,15898 HBL1_DMSO_200M_050219_2,15898,TASKISLLAFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15899 83.637 583.0 95494.0 25 0 8128.6 -1 0 97 680.9612783633049 2039.8620056901143 3 681.2963744997978 MULTI CID FTMS 0 0 0 15883 148589.328125 1.0 0 0.0 16 4 {[QN]|[E{I|L}]|[KN]}YY{I|L} 5 -1 25.5 0.0 0.0 1.2501 0.0 0.0 0.0 1355.4935724227896 1355.4935724227896 12.211284539738818 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.1803115997617927 0.0 {[QN]|[E{I|L}]|[KN]}YY{I|L} 1.2501 - 602 1 0.985 60029.4 1.0 10957 4940 15883 HBL1_DMSO_200M_050219_2,15899 HBL1_DMSO_200M_050219_2,15899, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15900 83.647 600.0 206810.0 25 0 18148.0 -1 ALCGRLLLLP 10 144 563.3465547639036 1124.678556594607 2 563.3482543826103 MULTI CID FTMS 0 0 0 15883 118697.75 0.9461838988004456 2 -0.2160186767578125 17 Carbamidomethyl (C) _ALC(Carbamidomethyl (C))GRLLLLP_ ENST00000280605.4_1_4:164394333-164394471:-|nuORF 20.453626601364224 0.5043500229302764 4 V{I|L}P 3 -1 25.802 0.0 0.0 2.2942 0.0 0.0 797.4667302527746 0.0 797.4667302527746 0.0 11.197887582883936 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.0 V{I|L}P 2.2942 - 554 1 0.985 100674.5 1.0 10958 4940 15883 HBL1_DMSO_200M_050219_2,15900 HBL1_DMSO_200M_050219_2,15900,ALCGRLLLLP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15901 83.658 643.0 126850.0 25 0 9903.0 -1 APMTYSSPLRR 11 113 647.8307755798211 1293.646998226442 2 647.8318969607353 MULTI CID FTMS 0 0 0 15883 116484.953125 1.0 0 0.0 18 Oxidation (M) _APM(Oxidation (M))TYSSPLRR_ ENST00000604202.1_1_6:26373056-26373254:+|nuORF 21.53697664764585 0.586507868110548 4 PAGV 4 -1 49.196 0.0 0.0 3.8029 0.0 0.0 0.0 966.4456630290426 966.4456630290426 11.254383617327754 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.0 PAGV 3.8029 - 439 + 1 0.985 66830.8 1.0 10959 4940 15883 HBL1_DMSO_200M_050219_2,15901 HBL1_DMSO_200M_050219_2,15901,APMTYSSPLRR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15902 83.67 627.0 238590.0 25 0 20596.0 24461 MIAGLCMLKL 10 156 546.8013602791655 0 546.8005248904228 PEAK CID FTMS 0 0 0 15883 128763.125 0.8999161547095216 -6 0.57763671875 19 Unmodified _MIAGLCMLKL_ ENSG00000072858|ENST00000264852|SIDT1;ENSG00000149577|ENST00000324225|SIDT2;ENST00000525065.1_1_11:117062460-117063438:+|nuORF;ENST00000529484.5_1_11:117061404-117064733:+|nuORF;nc|ENSG00000072858|Q9NXL6-2|SIDT1;nc|ENSG00000149577|Q8NBJ9-2|SIDT2 16.942295170755138 0.3221497226927513 4 PQ 2 10 10.217 0.0 0.0 0.93593 0.0 0.0 246.13971720944969 617.3150118463499 863.4547290557996 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 PQ 0.93593 - 305 + 1 0.985 120505.2 1.0 10960 4940 15883 HBL1_DMSO_200M_050219_2,15902 HBL1_DMSO_200M_050219_2,15902,MIAGLCMLKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15904 83.675 3.5 9302300.0 25 0 602170.0 + 45127 YQAPDIDVQL 10 63 581.2920041780851 1160.56945542297 2 581.2935058474541 MULTI CID FTMS 0 0 0 15903 15858835.0 0.75053715147861 1 -0.1006698608398437 1 Unmodified _YQAPDIDVQL_ ENSG00000105373|ENST00000246802|NOP53;ENST00000600410.5_1_19:48257983-48259211:+|nuORF 21.53697664764585 0.484802182336468 4 [DV][EP]A 5 9 16.412 0.0 0.0 1.4141 0.0 0.0 0.0 646.3176603392388 646.3176603392388 0.4382299078347547 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 [DV][EP]A 1.4141 - 125 1 0.983 31591.7 1.0 10961 4941 15903 HBL1_DMSO_200M_050219_2,15904 HBL1_DMSO_200M_050219_2,15904,YQAPDIDVQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15905 83.676 24.0 2194200.0 25 0 423750.0 + + 14054 IAVDRYLAI 9 75 517.3057265057804 1032.5969000783607 2 517.3063232302666 MULTI CID FTMS 0 0 0 15903 1650933.25 0.6702216032604696 1 -0.1006698608398437 2 Unmodified _IALFRDVSI_ nc|ENSG00000160683|P32302-2|CXCR5;ENSG00000160683|ENST00000292174|CXCR5 41.8396318013385 0.0653578398400075 4 {I|L}AVDT{[QS]|[NT]}{I|L}A{I|L} 10 -1 T{[QS]|[NT]}{I|L}A{I|L} + + 61.67 33.461 5.2998 5.9723 5.9723 56.605 0.0 0.0 0.0 36.97743773147742 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8494850021680094 0.0 {I|L}AVDT{[QS]|[NT]}{I|L}A{I|L} 5.9723 - 162 + 1 0.983 48275.1 1.0 10962 4941 15903 HBL1_DMSO_200M_050219_2,15905 HBL1_DMSO_200M_050219_2,15905,IALFRDVSI False False IAVDRYLAI 83.675808 517.306323230267 41103988.0 15903.0 nc|ENSG00000160683|P32302-2|CXCR5;;ENSG00000160683|ENST00000292174|CXCR5 4.551053682963054 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15906 83.677 39.0 1815000.0 25 0 239060.0 + 41468 VPLPNVPSI 9 81 468.2818541646448 934.5491553960896 2 468.2817870974541 MULTI CID FTMS 0 0 0 15903 1805556.625 1.0 0 0.0 3 Unmodified _VPLPNVPSI_ ENSG00000101421|ENST00000217402|CHMP4B;nc|ENSG00000258469|P59074|CHMP4BP1 48.345845343767074 0.0439967357579942 4 [VP]N{I|L}PVPS{I|L} 9 2 + 55.874 0.0 0.0 5.9787 5.9787 81.594 0.0 0.0 0.0 9.208187539523747 20.145228064086 9.208187539523747 5.897554856604174 0 1.0924778212679485 1.0969100130080565 0.0 0.2887254899964357 [VP]N{I|L}PVPS{I|L};[VP]NVP{I|L}PS{I|L};[VP]{I|L}NPVPS{I|L};[VP]QVPVPS{I|L};[NP]V{I|L}PVPS{I|L};[{I|L}P]VNPVPS{I|L};[VP]QPVVPS{I|L};[VP]N{I|L}PS[VP]{I|L};[VP]GG{I|L}PVPS{I|L};[{I|L}P]NVPVPS{I|L} 5.9787;5.3476;5.2307;5.0744;4.9934;4.837;4.8143;4.7536;4.6844;4.6806 -;-;-;-;-;-;-;-;-;- 569 1 0.983 60750.6 1.0 10963 4941 15903 HBL1_DMSO_200M_050219_2,15906 HBL1_DMSO_200M_050219_2,15906,VPLPNVPSI True True VPLPNVPSI 83.676985 468.281787097454 95518938.0 15903.0 ENSG00000101421|ENST00000217402|CHMP4B;;nc|ENSG00000258469|P59074|CHMP4BP1 5.575385093688965 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15907 83.679 76.0 821160.0 25 0 66475.0 -1 IQHYHDNCL 9 76 600.2673868410029 1198.5202207488055 2 600.2673217654228 MULTI CID FTMS 0 0 0 15903 1320919.625 1.0 0 0.0 4 Carbamidomethyl (C) _IQHYHDNC(Carbamidomethyl (C))L_ ENSG00000163440|ENST00000295645|PDCL2 18.1463463914782 0.3454829746528889 4 {I|L}Q{[MS]|[{M(Oxidation (M))|F}A]}D[YV]AC(Carbamidomethyl (C)) 9 -1 32.159 0.0 0.0 2.6832 0.0 0.0 0.0 128.07210718326408 128.07210718326408 11.40102093484527 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.4247425010840047 {I|L}Q{[MS]|[{M(Oxidation (M))|F}A]}D[YV]AC(Carbamidomethyl (C)) 2.6832 - 202 + 1 0.983 49146.5 1.0 10964 4941 15903 HBL1_DMSO_200M_050219_2,15907 HBL1_DMSO_200M_050219_2,15907,IQHYHDNCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15908 83.68 56.0 719330.0 25 0 71741.0 + -1 VYAACAGKACL 11 62 592.2835279598684 1182.5525029865366 2 592.2839843630791 MULTI CID FTMS 0 0 0 15903 1151871.625 1.0 0 0.0 5 2 Carbamidomethyl (C) _VYAAC(Carbamidomethyl (C))AGKAC(Carbamidomethyl (C))L_ REV__ENST00000313442.2_3:37284553-37285049:-|nuORF 13.042465956692816 0.7638483625850725 4 DPA{[WS]|[C(Carbamidomethyl (C)){I|L}]} 5 -1 26.695 0.0 0.0 2.2574 0.0 0.0 608.3151722638687 0.0 608.3151722638687 0.0 14.47621246364342 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 DPA{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.2574 - 37 1 0.983 36114.9 1.0 10965 4941 15903 HBL1_DMSO_200M_050219_2,15908 HBL1_DMSO_200M_050219_2,15908,VYAACAGKACL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15909 83.682 51.0 1281100.0 25 0 298960.0 + 9373 FIPPDGNFRL 10 59 588.3142142641116 1174.613875595023 2 588.3141357302666 MULTI CID FTMS 0 0 0 15903 1072336.0 0.8965610579867955 -2 0.199188232421875 6 Unmodified _FIPPDGNFRL_ ENSG00000070718|ENST00000396926|AP3M2;ENSG00000185009|ENST00000355264|AP3M1;ENST00000480373.1_1_10:75888732-75889691:-|nuORF;nc|ENSG00000070718|P53677-2|AP3M2 21.53697664764585 0.484802182336468 4 DPP{[QN]|[E{I|L}]|[KN]} 5 7 29.833 0.0 0.0 2.5398 0.0 0.0 605.3288571709672 0.0 605.3288571709672 0.0 19.83288122256525 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 DPP{[QN]|[E{I|L}]|[KN]} 2.5398 - 19 1 0.983 57035.6 1.0 10966 4941 15903 HBL1_DMSO_200M_050219_2,15909 HBL1_DMSO_200M_050219_2,15909,FIPPDGNFRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15910 83.683 54.0 1305100.0 25 0 257740.0 + 9686 FLREYFERL 9 59 424.8960487532812 1271.6663168600437 3 424.8960754275322 MULTI CID FTMS 0 0 0 15903 792910.375 0.7127687104113861 -1 0.1153488159179687 7 Unmodified _FLREYFERL_ ENSG00000108946|ENST00000589228|PRKAR1A;ENST00000592194.1_1_17:66508623-66511738:+|nuORF;nc|ENSG00000108946|P10644-2|PRKAR1A 42.312485326615175 0.0627620958981271 4 {M(Oxidation (M))|F}{I|L}REY{M(Oxidation (M))|F}E{I|L}R 9 2 + 66.838 0.0 0.0 5.2559 5.2559 78.866 0.0 0.0 0.0 50.3976719887757 15.273109370204452 15.273109370204452 6.064921830680703 0 0.8182503180159344 0.0 1.6549471895720984 0.3054621874040891 {M(Oxidation (M))|F}{I|L}REY{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}{I|L}REY{M(Oxidation (M))|F}{I|L}ER;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YEE{I|L}R;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YE{I|L}ER;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QR;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[AG]R;{M(Oxidation (M))|F}{I|L}[VG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QR 5.2559;4.779;4.6326;4.1557;2.3607;1.6366;1.6366 -;-;-;-;-;-;- 360 + 1 0.983 61466.9 1.0 10967 4941 15903 HBL1_DMSO_200M_050219_2,15910 HBL1_DMSO_200M_050219_2,15910,FLREYFERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15911 83.684 55.0 461920.0 25 0 33843.0 + 18808 LARCCHLVP 9 53 506.2628582408572 1010.5111635485144 2 506.2635070681572 MULTI CID FTMS 0 0 0 15903 763098.75 1.0 0 0.0 8 Unmodified _LARCCHLVP_ REV__ENST00000582878.1_1_17:25679239-25679365:-|nuORF 9.347437153973935 0.588369872918737 4 VV 2 -1 20.969 0.0 0.0 2.0751 0.0 0.0 0.0 809.3538591979637 809.3538591979637 9.3753063169585 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV 2.0751 - 42 + 1 0.983 27774.5 1.0 10968 4941 15903 HBL1_DMSO_200M_050219_2,15911 HBL1_DMSO_200M_050219_2,15911,LARCCHLVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15912 83.687 137.0 676230.0 25 0 97286.0 + 17869 KQLESLGISL 10 109 544.3219549879667 1086.629357042733 2 544.3223754763603 MULTI CID FTMS 0 0 0 15903 667885.0625 1.0 0 0.0 9 Unmodified _KQLESLGISL_ ENSG00000197892|ENST00000524189|KIF13B 89.60864043982822 0.0093616182375763 4 {[TV]|[{I|L}S]}G{I|L}QS{I|L}G{I|L}S{I|L} 11 4 + 98.119 0.0 0.0 9.0296 9.0296 89.626 0.0 0.0 0.0 15.50907468880581 16.575773191777927 15.50907468880581 6.064921830680703 0 0.5 1.5228787452803376 2.234636880228201 0.9916440611282626 {[TV]|[{I|L}S]}G{I|L}QS{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}GQS{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}G{I|L}SQ{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}G{I|L}E[KA]G{I|L}S{I|L};{[VA]|[{I|L}G]}S{I|L}QS{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}GSQ{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}GE[KA]G{I|L}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QS{I|L}G{I|L}S{I|L};[KQ]{I|L}ES{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}G{I|L}[AG]S{I|L}G{I|L}S{I|L} 9.0296;8.4715;8.0349;8.0335;7.6024;7.4767;7.4754;7.4621;7.2855;7.277 -;-;-;-;-;-;-;-;+;- + 2035 1 0.983 74179.9 1.0 10969 4941 15903 HBL1_DMSO_200M_050219_2,15912 HBL1_DMSO_200M_050219_2,15912,KQLESLGISL True True KQLESLGISL 83.687079 544.32237547636 6353338.0 15903.0 ENSG00000197892|ENST00000524189|KIF13B 3.8669492403666177 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15913 83.69 128.0 717490.0 25 0 90805.0 14213 IDLRHRIQL 9 115 582.3530011979228 1162.6914494626456 2 582.8545410037041 MULTI CID FTMS 0 0 0 15903 505233.75 0.7496413957799878 -1 0.1153488159179687 10 Unmodified _IDLRHRIQL_ ENSG00000103264|ENST00000311635|FBXO31;nc|ENSG00000103264|Q5XUX0-2|FBXO31 4.75600775471527 0.7486543447549536 4 AC(Carbamidomethyl (C)){I|L} 3 8 15.058 0.0 0.0 1.2951 0.0 0.0 800.532679359721 0.0 800.532679359721 0.0 6.079053973095194 0.0 0.0 0 0.0 0.0 0.0 0.0 AC(Carbamidomethyl (C)){I|L} 1.2951 - 233 + 1 0.983 81055.2 1.0 10970 4941 15903 HBL1_DMSO_200M_050219_2,15913 HBL1_DMSO_200M_050219_2,15913,IDLRHRIQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15914 83.697 433.0 456620.0 25 0 42717.0 + 18314 KVLDLKINL 9 171 528.3448548508848 1054.6751567685694 2 528.3450805544853 MULTI CID FTMS 0 0 0 15903 436786.625 0.377778599436796 5 -0.5941162109375 11 Unmodified _KVLDLKINL_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 98.72992552434108 0.0114286552575212 4 KV{I|L}D{I|L}K{I|L}QV 9 2 + 85.41 0.0 0.0 8.0982 8.0982 81.428 0.0 0.0 0.0 19.921525057367404 1.7339374311232802 1.7339374311232802 1.7339374311232802 0 2.3516784832448856 0.494850021680094 0.3252574989159953 2.416386562212267 KV{I|L}D{I|L}K{I|L}QV;KV{I|L}D{I|L}K{I|L}N{I|L};KV{I|L}D{I|L}K{I|L}AGV;KV{I|L}D{I|L}KN{I|L}{I|L};KV{I|L}D{I|L}KQ{I|L}V;KV{I|L}D{I|L}K{I|L}GG{I|L};KV{I|L}D{I|L}KQV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}VKQV;KV{I|L}D{I|L}{I|L}QKV;KV{I|L}D{I|L}KGG{I|L}{I|L} 8.0982;7.9338;6.8805;6.4377;6.3726;6.3388;6.2082;5.3219;5.2912;5.2037 -;+;-;-;-;-;-;-;-;- + 5363 + 1 0.983 152490.0 1.0 10971 4941 15903 HBL1_DMSO_200M_050219_2,15914 HBL1_DMSO_200M_050219_2,15914,KVLDLKINL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15915 83.705 421.0 522690.0 25 0 37616.0 + 30672 RFPEELTQTF 10 142 634.3192248256998 1266.6238967181996 2 634.3200561404228 MULTI CID FTMS 0 0 0 15903 440141.03125 0.9784049495873052 6 -0.6806259155273438 12 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 40.23920728925047 0.1550410903091231 4 [DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F} 10 5 + 56.516 0.0 0.0 4.462 4.462 77.15 0.0 0.0 0.0 2.539395273993378 28.85699351063065 2.539395273993378 7.65213488482798 0 0.9247425010840048 0.744727494896694 0.9978499570595204 0.0 [DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};[AG]S[SG][W{I|L}]{I|L}TQT{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}T[AG]T{M(Oxidation (M))|F};[{I|L}P]K{[{M(Oxidation (M))|F}C]|[YS]}{[QG]|[NA]}VQT{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}RH[HN]TQT{M(Oxidation (M))|F};{[ET]|[MV]}E[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};{[QS]|[NT]}[SG][W{I|L}]{I|L}TQT{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}TK{[QG]|[NA]}VQT{M(Oxidation (M))|F};[QT][YV]P{[QG]|[NA]}VQT{M(Oxidation (M))|F};[AG]T[YV]P{[QG]|[NA]}VQT{M(Oxidation (M))|F} 4.462;3.8578;3.7384;3.6269;3.5227;3.4441;3.4206;3.2771;3.1216;3.1126 -;-;-;-;-;-;-;-;-;- 4775 1 0.983 167717.1 1.0 10972 4941 15903 HBL1_DMSO_200M_050219_2,15915 HBL1_DMSO_200M_050219_2,15915,RFPEELTQTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15916 83.714 499.0 562160.0 25 0 113520.0 + 9688 FLREYFERL 9 116 636.8408647700014 1271.6671766068027 2 636.8400146365166 MULTI CID FTMS 0 0 0 15903 297304.1875 0.6177320147236524 -1 0.1153488159179687 13 Unmodified _FLREYFERL_ ENSG00000108946|ENST00000589228|PRKAR1A;ENST00000592194.1_1_17:66508623-66511738:+|nuORF;nc|ENSG00000108946|P10644-2|PRKAR1A 67.08073823543168 0.0222274355215578 4 R{M(Oxidation (M))|F}YEER{I|L} 7 4 60.2 0.0 0.0 4.734 0.0 0.0 260.1525746076188 0.0 260.1525746076188 0.0 44.71569358394503 0.0 0.0 0 1.610924374808178 0.0 0.3252574989159953 0.2887254899964357 R{M(Oxidation (M))|F}YEER{I|L} 4.734 - 944 1 0.983 202323.9 1.0 10973 4941 15903 HBL1_DMSO_200M_050219_2,15916 HBL1_DMSO_200M_050219_2,15916,FLREYFERL True True FLREYFERL 83.713777 636.840014636517 28596652.0 15903.0 ENST00000592194.1_1_17:66508623-66511738:+|nuORF;;ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 4.194428682327271 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15917 83.723 525.0 425610.0 25 0 66801.0 + 3726 DAFRQPSLFY 10 139 622.3089899410054 1242.6034269488107 2 622.3096191287041 MULTI CID FTMS 0 0 0 15903 264442.875 0.2227626706000423 -2 0.199188232421875 14 Unmodified _DAFRQPSLFY_ ENSG00000197442|ENST00000359015|MAP3K5 55.23464941255904 0.0494277333541689 4 {[DA]|[EG]}{M(Oxidation (M))|F}RQ[PS]{I|L}{M(Oxidation (M))|F}Y 10 0 + 69.843 0.0 0.0 5.6207 5.6207 83.333 0.0 0.0 0.0 17.261198536203594 16.53212513775344 16.53212513775344 9.164539485499256 0 1.6861818737241734 1.154901959985743 0.8494850021680094 0.2302046884880938 + + {[DA]|[EG]}{M(Oxidation (M))|F}RQ[PS]{I|L}{M(Oxidation (M))|F}Y;{[DA]|[EG]}{M(Oxidation (M))|F}R[AG][PS]{I|L}{M(Oxidation (M))|F}Y;[PS]{M(Oxidation (M))|F}{I|L}{[QN]|[E{I|L}]|[KN]}D{I|L}{M(Oxidation (M))|F}Y;[PS]{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}D{I|L}{M(Oxidation (M))|F}Y;{[{M(Oxidation (M))|F}D]|MM}ARQ[PS]{I|L}{M(Oxidation (M))|F}Y;[PS]{M(Oxidation (M))|F}{I|L}{[QN]|[E{I|L}]|[KN]}{I|L}D{M(Oxidation (M))|F}Y;[PS]{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}{I|L}D{M(Oxidation (M))|F}Y;[VG][W{M(Oxidation (M))|F}]Q[PS]{I|L}{M(Oxidation (M))|F}Y;[{I|L}A]{M(Oxidation (M))|F}{[SA]|[TG]}Q[PS]{I|L}{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HA]{M(Oxidation (M))|F}AD{I|L}{M(Oxidation (M))|F}Y 5.6207;4.8831;4.2316;4.1926;3.9308;3.6875;3.6485;3.6066;3.5669;3.5352 +;-;-;-;-;-;-;-;-;- + 2867 1 0.983 165571.1 1.0 10974 4941 15903 HBL1_DMSO_200M_050219_2,15917 HBL1_DMSO_200M_050219_2,15917,DAFRQPSLFY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15918 83.733 591.0 430380.0 25 0 33404.0 -1 0 133 914.4324494254988 1826.8503459177973 2 914.434130847454 MULTI CID FTMS 0 0 0 15903 256794.578125 0.4637382245837013 2 -0.2395706176757812 15 4 {[QV]|[N{I|L}]|[RA]|[KV]}AT[C(Carbamidomethyl (C))S]AQQNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 97.042 0.0 0.0 5.312 5.312 53.818 0.0 0.0 0.0 4.323806533759438 10.898255349109505 4.323806533759438 0.0 0 0.3054621874040891 1.3010299956639813 0.0 2.1237125054200234 {[QV]|[N{I|L}]|[RA]|[KV]}AT[C(Carbamidomethyl (C))S]AQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AT[C(Carbamidomethyl (C))S]AQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N[C(Carbamidomethyl (C))C]QQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N[C(Carbamidomethyl (C))C]QQNA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AT[C(Carbamidomethyl (C))S]AQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AT[C(Carbamidomethyl (C))S]AQQGGA{M(Oxidation (M))|F}YKV{I|L} 5.312;5.312;5.0753;5.0753;4.9779;4.9779;4.9105;4.9105;4.8186;4.8186 -;-;-;-;-;-;-;-;-;- 10751 1 0.983 169215.5 1.0 10975 4941 15903 HBL1_DMSO_200M_050219_2,15918 HBL1_DMSO_200M_050219_2,15918, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15919 83.743 560.0 244960.0 25 0 20983.0 + 15543 YAHFPINVV 9 185 529.7813180389884 1057.548083144777 2 530.2838622927666 MULTI CID FTMS 0 0 0 15903 255601.5 1.0 0 0.0 16 Unmodified _IPWDSTQVI_ ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENST00000511075.5_1_4:39457912-39460059:-|nuORF 13.50788311687929 0.4710407108020397 4 {[{M(Oxidation (M))|F}H]|[RQ]}S{M(Oxidation (M))|F}P{I|L}NV 8 8 41.363 0.0 0.0 3.9112 0.0 0.0 0.0 113.05202536573292 113.05202536573292 10.059034764951845 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.3494850021680094 {[{M(Oxidation (M))|F}H]|[RQ]}S{M(Oxidation (M))|F}P{I|L}NV 3.9112 - 4320 1 0.983 119968.9 1.0 10976 4941 15903 HBL1_DMSO_200M_050219_2,15919 HBL1_DMSO_200M_050219_2,15919,IPWDSTQVI False True YAHFPINVV 83.743204 530.283862292767 2600176.75 15903.0 ENSG00000163682|ENST00000295955|RPL9;;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;;ENST00000511075.5_1_4:39457912-39460059:-|nuORF 7.823410193125407 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15920 83.75 284.0 201560.0 25 0 27516.0 + 10850 GAAWHEAEP 9 77 323.1475716953206 0 322.8322326540947 PEAK CID FTMS 0 0 0 15903 132139.484375 1.0 0 0.0 17 Unmodified _GAAWHEAEP_ REV__ENST00000239462.8_1_1:175097875-175105960:+|nuORF 4.3292370932331545 0.3444685223463734 4 V 1 -1 4.6041 0.0 0.0 0.71461 0.0 0.0 474.1379798390803 68.05144678287343 542.1894266219538 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.71461 - 3 + 1 0.983 51868.4 1.0 10977 4941 15903 HBL1_DMSO_200M_050219_2,15920 HBL1_DMSO_200M_050219_2,15920,GAAWHEAEP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15921 83.754 252.0 365800.0 25 0 23870.0 1446 ALEHETNL 8 127 309.49051870186247 925.4497267057876 3 309.4922973513603 MULTI CID FTMS 0 0 0 15903 235001.546875 0.6099318227238337 30 -3.3778610229492188 18 Unmodified _ALEHETNL_ ENST00000441249.1_1_6:139592511-139592610:+|nuORF 6.354104778181461 0.7857632046190106 4 VV 2 8 20.969 0.0 0.0 2.2658 0.0 0.0 0.0 724.3023081543582 724.3023081543582 8.494850021680094 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV 2.2658 - 27 + 1 0.983 82270.0 1.0 10978 4941 15903 HBL1_DMSO_200M_050219_2,15921 HBL1_DMSO_200M_050219_2,15921,ALEHETNL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15922 83.758 187.0 319110.0 25 0 36589.0 + 2288 AQIDDDVFDKI 11 84 639.8145814262969 1277.6146099193936 2 639.8166992068291 MULTI CID FTMS 0 0 0 15903 150311.9375 0.3312074007847648 -2 0.199188232421875 19 Unmodified _AQIDDDVFDKI_ ENSG00000109805|ENST00000251496|NCAPG;ENST00000513226.1_1_4:17812700-17814869:+|nuORF 36.39500950444726 0.267929034476522 4 [QA]{I|L}DDDV{M(Oxidation (M))|F}DK{I|L} 11 0 + 76.037 0.0 0.0 5.9515 5.9515 82.266 0.0 0.0 0.0 58.61397500689688 12.350282991706656 12.350282991706656 6.530899869919438 0 0.9247425010840048 0.8538719643217619 0.5 0.0 + + [QA]{I|L}DDDV{M(Oxidation (M))|F}DK{I|L};[QA]{I|L}DDDV{M(Oxidation (M))|F}KD{I|L};[QA]{I|L}DDDV{M(Oxidation (M))|F}[VG]S{I|L};[QA]{I|L}DDDV[R{M(Oxidation (M))|F}]S{I|L} 5.9515;5.4403;4.7883;4.5064 +;-;-;- + 267 + 1 0.983 49488.7 1.0 10979 4941 15903 HBL1_DMSO_200M_050219_2,15922 HBL1_DMSO_200M_050219_2,15922,AQIDDDVFDKI False True AQIDDDVFDKI 83.757893 639.816699206829 8572161.0 15903.0 ENST00000513226.1_1_4:17812700-17814869:+|nuORF;;ENSG00000109805|ENST00000251496|NCAPG 5.801913420359294 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15923 83.771 753.0 253090.0 25 0 13740.0 28861 QAIPTVQHHL 10 191 572.3167473834218 1142.6189418336437 2 572.3180419802666 MULTI CID FTMS 0 0 0 15903 144727.46875 1.0 0 0.0 20 Unmodified _QAIPTVQHHL_ ENST00000515455.2_1_16:30108011-30108224:+|nuORF 29.081581746732265 0.3152867722954398 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VRSD{I|L} 8 7 47.858 0.0 0.0 4.1885 0.0 0.0 0.0 196.0709089578851 196.0709089578851 7.495694911706529 0.0 0.0 0.0 0 1.1861818737241734 0.958607314841775 0.6050541008457975 0.2302046884880938 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VRSD{I|L} 4.1885 - 6236 1 0.983 146368.4 1.0 10980 4941 15903 HBL1_DMSO_200M_050219_2,15923 HBL1_DMSO_200M_050219_2,15923,QAIPTVQHHL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 15925 83.775 7.9 6907900.0 25 0 831610.0 + 9853 FPFGKIGTV 9 60 483.2765192074866 964.5384854817733 2 483.2767516970634 MULTI CID FTMS 0 0 0 15924 6677075.0 0.92647464884688 -1 0.1006698608398437 1 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 47.74868867922204 0.0453060283459952 4 [KG]{M(Oxidation (M))|F}{I|L}GTVP{M(Oxidation (M))|F} 9 6 + 39.051 0.0 0.0 4.0487 4.0487 65.8 0.0 0.0 0.0 0.9298626587642717 0.9298626587642717 0.9298626587642717 0.9298626587642717 0 0.0 0.0 0.0 0.0 [KG]{M(Oxidation (M))|F}{I|L}GTVP{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[K{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;{M(Oxidation (M))|F}[{I|L}T]TG{I|L}[WK];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[K{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};{M(Oxidation (M))|F}[{I|L}T]TG{[QV]|[N{I|L}]|[RA]|[KV]}TV;[KG]{M(Oxidation (M))|F}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;[YV]VTG{I|L}[WK];[KG]{M(Oxidation (M))|F}{I|L}M[K{I|L}]E;{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{[QV]|[N{I|L}]|[RA]|[KV]}TV;[KG]{M(Oxidation (M))|F}{I|L}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F} 4.0487;3.9523;3.3044;3.1998;2.7334;2.6815;2.5519;2.4514;2.3739;2.3694 -;-;-;-;-;-;-;-;-;- 163 1 0.983 47994.4 1.0 10981 4942 15924 HBL1_DMSO_200M_050219_2,15925 HBL1_DMSO_200M_050219_2,15925,FPFGKIGTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15926 83.776 14.0 3214300.0 25 0 701480.0 + 41858 VPYLVGQVV 9 67 487.28940627416745 972.5642596151348 2 487.2897216677666 MULTI CID FTMS 0 0 0 15924 3013591.75 0.469909698533298 1 -0.1389007568359375 2 Unmodified _VPYLVGQVV_ ENSG00000126088|ENST00000246337|UROD;ENST00000494399.5_1_1:45478966-45479784:+|nuORF 42.96799951952854 0.0591636306142405 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV 9 2 + 48.082 0.0 0.0 4.9439 4.9439 76.014 0.0 0.0 0.0 10.413926851582248 7.147642715192504 7.147642715192504 4.771212547196626 0 0.0 1.2218487496163564 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}VGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGVQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVG[AG]VV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GVQVV;[VP]Y{I|L}VGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGV[AG]VV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}VG[AG]VV 4.9439;4.4533;4.4533;4.2722;3.9971;3.9627;3.8731;3.7816;3.5065;3.5065 -;-;-;-;-;-;+;-;-;- + 350 1 0.983 38809.4 1.0 10982 4942 15924 HBL1_DMSO_200M_050219_2,15926 HBL1_DMSO_200M_050219_2,15926,VPYLVGQVV True True VPYLVGQVV 83.776474 487.289721667767 159044748.0 15924.0 ENST00000494399.5_1_1:45478966-45479784:+|nuORF;;ENSG00000126088|ENST00000246337|UROD 5.1817019780476885 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15927 83.778 40.0 1413200.0 25 0 130810.0 + 20638 LLPSEGIVHL 10 78 539.3200416298911 1076.625530326582 2 539.3199951052666 MULTI CID FTMS 0 0 0 15924 1243426.0 1.0 0 0.0 3 Unmodified _LLPSEGIVHL_ ENSG00000151575|ENST00000696102|TEX9;nc|ENSG00000151575|Q8N6V9-2|TEX9 34.10243960390752 0.2198439752719791 4 {I|L}{I|L}PSE{[VA]|[{I|L}G]}VH{I|L} 10 0 + 57.937 0.0 0.0 5.3813 5.3813 76.104 0.0 0.0 0.0 14.739605237541866 9.921525057367404 9.921525057367404 3.521825181113627 0 0.3807196863200844 2.0 0.3494850021680094 0.0 + + {I|L}{I|L}PSE{[VA]|[{I|L}G]}VH{I|L};{I|L}{I|L}PSE[R{I|L}]H{I|L};{I|L}{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[HK]H{I|L};{I|L}{I|L}{I|L}{[QS]|[NT]}{[QV]|[N{I|L}]|[RA]|[KV]}[YN] 5.3813;5.0542;2.6597;2.1266 +;-;-;- + 236 + 1 0.983 52591.1 1.0 10983 4942 15924 HBL1_DMSO_200M_050219_2,15927 HBL1_DMSO_200M_050219_2,15927,LLPSEGIVHL False True LLPSEGIVHL 83.777651 539.319995105267 13721486.0 15924.0 ENSG00000151575|ENST00000696102|TEX9;;nc|ENSG00000151575|Q8N6V9-2|TEX9 6.515321095784505 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15928 83.779 63.0 1131400.0 25 0 244190.0 + 20378 LLGPRLVLA 9 84 476.3211434766972 950.6277340201945 2 476.3211852908134 MULTI CID FTMS 0 0 0 15924 1040447.3125 0.0760839263560973 4 -0.4934463500976562 4 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 39.957323273325 0.0756908302845263 4 {I|L}{I|L}G 3 6 48.06 0.0 0.0 5.0556 0.0 0.0 0.0 664.4181612604124 664.4181612604124 11.389530984084216 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}{I|L}G 5.0556 + + 38 + 1 0.983 61156.2 1.0 10984 4942 15924 HBL1_DMSO_200M_050219_2,15928 HBL1_DMSO_200M_050219_2,15928,LLGPRLVLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15929 83.78 42.0 1378600.0 25 0 156070.0 + 9806 FPAPILRAV 9 70 492.30552976104894 982.596506588898 2 492.3055297732353 MULTI CID FTMS 0 0 0 15924 975409.6875 0.5953815735231183 -2 0.2160186767578125 5 Unmodified _FPAPILRAV_ chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161681590-161683167:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-11|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-14|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-4|FCRLA;nc|ENSG00000132185|Q7L513-5|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 32.30548876998284 0.1201446275138228 4 {M(Oxidation (M))|F}K{I|L}{I|L}PAPE 8 6 57.344 0.0 0.0 5.836 0.0 0.0 69.05867964912265 0.0 69.05867964912265 0.0 46.5068199461 0.0 0.0 0 1.0 0.0 0.0 0.0 {M(Oxidation (M))|F}K{I|L}{I|L}PAPE 5.836 - 92 1 0.983 50401.7 1.0 10985 4942 15924 HBL1_DMSO_200M_050219_2,15929 HBL1_DMSO_200M_050219_2,15929,FPAPILRAV True True FPAPILRAV 83.78036 492.305529773235 44901340.0 15924.0 ENST00000470841.1_1_1:161681590-161683167:+|nuORF;;nc|ENSG00000132185|Q7L513-11|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-3|FCRLA;;chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;nc|ENSG00000132185|Q7L513-4|FCRLA;;nc|ENSG00000132185|Q7L513-14|FCRLA;;nc|ENSG00000132185|Q7L513-5|FCRLA 6.550879796346028 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15930 83.782 57.0 859010.0 25 0 144170.0 + 1709 ALPLSEGTH 9 63 462.744003502894 0 462.7440673708916 PEAK CID FTMS 0 0 0 15924 631399.9375 0.2411499874584043 1 -0.1389007568359375 6 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 15.847184025352805 0.2451986057151378 4 P{I|L} 2 -1 13.711 0.0 0.0 1.4848 0.0 0.0 184.1207645208032 526.1941012018186 710.3148657226218 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L} 1.4848 + + 10 + 1 0.983 42978.5 1.0 10986 4942 15924 HBL1_DMSO_200M_050219_2,15930 HBL1_DMSO_200M_050219_2,15930,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15931 83.784 103.0 786450.0 25 0 62502.0 + 22549 LPWPFRNKV 9 92 386.2259835217569 1155.6561211654707 3 386.2258178591728 MULTI CID FTMS 0 0 0 15924 571455.8125 0.6941976336993717 -3 0.2998580932617187 7 Unmodified _LPWPFRNKV_ ENSG00000056558|ENST00000373887|TRAF1;nc|ENSG00000056558|Q13077-2|TRAF1 26.268140514670165 0.1969607489560049 4 {I|L}PWV 4 5 43.889 0.0 0.0 3.7977 0.0 0.0 0.0 657.3495877472304 657.3495877472304 20.13296575220324 0.0 0.0 0.0 0 0.2742275032520141 1.2218487496163564 0.0 0.0 {I|L}PWV 3.7977 - 255 + 1 0.983 73805.5 1.0 10987 4942 15924 HBL1_DMSO_200M_050219_2,15931 HBL1_DMSO_200M_050219_2,15931,LPWPFRNKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15932 83.793 493.0 370120.0 25 0 83055.0 + 38913 TVLGVPKKPLE 11 121 590.8665908245489 1179.7186287158977 2 590.8669921755791 MULTI CID FTMS 0 0 0 15924 454881.0 1.0 0 0.0 8 Unmodified _TVLGVPKKPLE_ REV__ENSG00000121671|ENST00000616080|CRY2;REV__nc|ENSG00000121671|Q49AN0-2|CRY2 2.6312355333042263 0.8627335947654684 4 E{I|L}M 3 -1 14.693 0.0 0.0 1.2454 0.0 0.0 243.25788760437268 560.2652681940061 803.5231557983789 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}M 1.2454 - 80 + 1 0.983 141250.3 1.0 10988 4942 15924 HBL1_DMSO_200M_050219_2,15932 HBL1_DMSO_200M_050219_2,15932,TVLGVPKKPLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15933 83.796 191.0 670930.0 25 0 137080.0 + 18600 LADTASFCI 9 78 470.7263908802107 939.4382288272216 2 470.7263671755791 MULTI CID FTMS 0 0 0 15924 412503.5 0.1296665719191896 1 -0.1389007568359375 9 Unmodified _LADTASFCI_ REV__ENSG00000112494|ENST00000230256|UNC93A;REV__nc|ENSG00000112494|Q86WB7-2|UNC93A 23.1484247019978 0.2366544122328345 4 {I|L}A{I|L}[DG]{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 9 -1 + 47.866 0.0 0.0 5.0951 5.0951 86.137 0.0 0.0 0.0 32.588025744008235 1.183174735333168 1.183174735333168 26.08317318037536 0 0.3494850021680094 2.0 0.4247425010840047 0.0 {I|L}A{I|L}[DG]{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{I|L}T{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[C(Carbamidomethyl (C))R];[{M(Oxidation (M))|F}V][R{M(Oxidation (M))|F}]WW 5.0951;2.3187;0.41785 -;-;- 70 + 1 0.983 105321.9 1.0 10989 4942 15924 HBL1_DMSO_200M_050219_2,15933 HBL1_DMSO_200M_050219_2,15933,LADTASFCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15934 83.801 247.0 955820.0 25 0 263030.0 + 31879 RTLETLIRL 9 132 557.8506980563074 1113.6868431794146 2 557.8508788943291 MULTI CID FTMS 0 0 0 15924 340751.71875 0.0163648090016705 -3 0.2998580932617187 10 Unmodified _RTLETLIRL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 49.52724829834842 0.0414064571532091 4 [{I|L}T]RET{I|L}{I|L} 7 4 48.396 0.0 0.0 4.3455 0.0 0.0 0.0 284.1735966074372 284.1735966074372 26.885288017942848 0.0 0.0 0.0 0 1.079689690656103 2.0 0.4349821530037313 0.805462187404089 [{I|L}T]RET{I|L}{I|L} 4.3455 - 1071 1 0.983 182370.5 1.0 10990 4942 15924 HBL1_DMSO_200M_050219_2,15934 HBL1_DMSO_200M_050219_2,15934,RTLETLIRL True True RTLETLIRL 83.801008 557.850878894329 563228064.0 15924.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 4.666155020395915 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15935 83.812 634.0 299060.0 25 0 17871.0 + 17914 KQVEDDIQQLL 11 151 664.8569586004749 1327.6993642677496 2 664.8579589724541 MULTI CID FTMS 0 0 0 15924 297322.1875 0.5704891854328648 -1 0.1006698608398437 11 Unmodified _KQVEDDIQQLL_ ENSG00000161057|ENST00000292644|PSMC2;ENST00000460021.1_1_7:102994369-103002536:+|nuORF 107.5634045930896 0.009905022604853 4 [AG]QTNKD{I|L}QQ{I|L}{I|L} 12 5 + 125.35 0.0 0.0 9.4409 9.4409 86.057 0.0 0.0 0.0 8.776981377719267 16.611814434466197 8.776981377719267 3.0678062459420232 0 1.2614393726401687 2.0 1.3807196863200843 2.635151878060192 [AG]QTNKD{I|L}QQ{I|L}{I|L};[AG]{I|L}DKDD{I|L}QQ{I|L}{I|L};[AG]KVEDD{I|L}QQ{I|L}{I|L};[AG]Q{I|L}{[ET]|[MV]}D{I|L}QQ{I|L}{I|L};[Q{I|L}]DKDD{I|L}QQ{I|L}{I|L};[AG]VEKDD{I|L}QQ{I|L}{I|L};[AG]QTNKD{I|L}Q[AG]{I|L}{I|L};[AG]QTGGKD{I|L}QQ{I|L}{I|L};[AG]QTNKD{I|L}[AG]Q{I|L}{I|L};[AG]QTNDK{I|L}QQ{I|L}{I|L} 9.4409;9.2098;8.8726;8.8649;8.7798;8.7563;8.7556;8.7556;8.7556;8.7221 -;-;-;-;-;-;-;-;-;- 15843 1 0.983 147550.7 1.0 10991 4942 15924 HBL1_DMSO_200M_050219_2,15935 HBL1_DMSO_200M_050219_2,15935,KQVEDDIQQLL True True KQVEDDIQQLL 83.812087 664.857958972454 9300635.0 15924.0 ENST00000460021.1_1_7:102994369-103002536:+|nuORF;;ENSG00000161057|ENST00000292644|PSMC2 7.342032750447591 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15936 83.817 258.0 494550.0 25 0 67884.0 11371 GGCVPDFL 8 108 404.18740568680334 806.3602584404067 2 404.1876098513603 MULTI CID FTMS 0 0 0 15924 288455.6875 0.4133225103097986 -1 0.1006698608398437 12 Unmodified _GGCVPDFL_ ENSG00000123411|ENST00000547167|IKZF4;ENST00000547668.5_1_12:56415277-56418480:+|nuORF 10.183394434864962 0.7604730176254005 4 {[{M(Oxidation (M))|F}H]|[RQ]}E{I|L}{[{M(Oxidation (M))|F}D]|MM} 6 6 + 33.543 0.0 0.0 4.1598 4.1598 70.931 0.0 0.0 0.0 6.314374728998828 3.336134377877329 3.336134377877329 3.336134377877329 0 0.3252574989159953 1.0 0.3807196863200844 0.3807196863200844 {[{M(Oxidation (M))|F}H]|[RQ]}E{I|L}{[{M(Oxidation (M))|F}D]|MM};{[{M(Oxidation (M))|F}H]|[RQ]}ED{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}D]|MM}EH{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}D]|MM};{[{M(Oxidation (M))|F}D]|MM}E{M(Oxidation (M))|F}H{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[C(Carbamidomethyl (C))K]C{I|L};{[{M(Oxidation (M))|F}D]|MM}E{M(Oxidation (M))|F}{I|L}H;{[{M(Oxidation (M))|F}D]|MM}E{I|L}{M(Oxidation (M))|F}H;{[QG]|[NA]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[{M(Oxidation (M))|F}D]|MM} 4.1598;3.7461;3.3767;3.0682;3.0098;2.6246;2.6238;1.8349;1.8349;0.87504 -;-;-;-;-;-;-;-;-;- 129 1 0.983 103438.1 1.0 10992 4942 15924 HBL1_DMSO_200M_050219_2,15936 HBL1_DMSO_200M_050219_2,15936,GGCVPDFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15937 83.823 360.0 2708900.0 25 0 550560.0 + 1526 ALISYCPSS 9 147 314.15352150719866 939.438735121796 3 314.1531249880791 MULTI CID FTMS 0 0 0 15924 278716.1875 0.0986116667596883 1 -0.1389007568359375 13 Unmodified _ALISYCPSS_ REV__ENST00000528234.5_1_11:58874728-58877073:+|nuORF;REV__ENST00000529618.5_2_11:58874728-58891664:+|nuORF 36.04419817259434 0.0971720506436186 4 A{I|L}{I|L}S 4 -1 62.629 0.0 0.0 6.6667 0.0 0.0 0.0 552.1787894172652 552.1787894172652 26.218912008796984 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.110924374808178 0.0 A{I|L}{I|L}S 6.6667 + + 792 + 1 0.983 767889.4 1.0 10993 4942 15924 HBL1_DMSO_200M_050219_2,15937 HBL1_DMSO_200M_050219_2,15937,ALISYCPSS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15938 83.836 741.0 303040.0 25 0 31721.0 + 28454 PTDYMETV 8 189 478.2094409348333 954.4043289364666 2 478.7113830447197 MULTI CID FTMS 0 0 0 15924 263488.09375 0.5838780199325242 19 -2.3120651245117188 14 Unmodified _PTDYMETV_ REV__ENSG00000189430|ENST00000291890|NCR1;REV__nc|ENSG00000189430|O76036-2|NCR1;REV__nc|ENSG00000189430|O76036-6|NCR1;REV__nc|ENSG00000189430|O76036|NCR1 13.50788311687929 0.7113601687236069 4 [{I|L}A]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))AS 7 -1 30.634 0.0 0.0 3.2098 0.0 0.0 0.0 155.05886107154848 155.05886107154848 15.585003915861648 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.0 [{I|L}A]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))AS 3.2098 - 1203 1 0.983 168264.0 1.0 10994 4942 15924 HBL1_DMSO_200M_050219_2,15938 HBL1_DMSO_200M_050219_2,15938,PTDYMETV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15939 83.85 701.0 304950.0 25 0 19110.0 + 41220 VPFENKLYL 9 184 561.813152914889 1121.611752896578 2 561.8137695193291 MULTI CID FTMS 0 0 0 15924 237994.40625 0.9945400219375926 1 -0.1389007568359375 15 Unmodified _VPFENKLYL_ ENSG00000213160|ENST00000392647|KLHL23 51.629811660486645 0.0367964933207742 4 VP{M(Oxidation (M))|F}ENK{I|L}Y{I|L} 9 0 + 51.322 0.0 0.0 4.5758 4.5758 70.231 0.0 0.0 0.0 3.5095628692308622 2.218487496163561 2.218487496163561 2.218487496163561 0 0.8979400086720375 1.3010299956639813 0.25 0.0 + + VP{M(Oxidation (M))|F}ENK{I|L}Y{I|L};VP{M(Oxidation (M))|F}ENK{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HH{I|L}PV{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ENK{I|L}V{I|L}Y;V{I|L}MENK{I|L}Y{I|L};VP{M(Oxidation (M))|F}EGGK{I|L}Y{I|L};V{I|L}MENK{I|L}{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HHP{I|L}V{I|L}Y;VP{M(Oxidation (M))|F}EGGK{I|L}{I|L}Y;VP[KS]P{M(Oxidation (M))|F}[TA]Y{I|L} 4.5758;4.378;4.2629;4.2076;3.9479;3.7548;3.7501;3.655;3.557;3.4761 +;-;-;-;-;-;-;-;-;- + 6276 + 1 0.983 171110.8 1.0 10995 4942 15924 HBL1_DMSO_200M_050219_2,15939 HBL1_DMSO_200M_050219_2,15939,VPFENKLYL True True VPFENKLYL 83.849551 561.813769519329 2856298.75 15924.0 ENSG00000213160|ENST00000392647|KLHL23 4.972073396046956 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15940 83.862 744.0 139160.0 25 0 30036.0 + 40881 VLREKRREARE 11 121 721.4213010139044 1440.8280490946088 2 721.4227783083916 MULTI CID FTMS 0 0 0 15924 211429.59375 0.6265973574310363 5 -0.5799560546875 16 Unmodified _VLREKRREARE_ REV__ENSG00000048649|ENST00000308488|RSF1;REV__nc|ENSG00000048649|Q96T23-2|RSF1;REV__nc|ENSG00000048649|Q96T23-3|RSF1 1.1933415558491238 0.8695176722560516 4 A{I|L}A 3 -1 13.188 0.0 0.0 0.91528 0.0 0.0 649.4276107174588 533.2426241510374 1182.6702348684962 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}A 0.91528 - 537 + 1 0.983 78944.3 1.0 10996 4942 15924 HBL1_DMSO_200M_050219_2,15940 HBL1_DMSO_200M_050219_2,15940,VLREKRREARE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15941 83.868 284.0 544910.0 25 0 48284.0 + 45678 YVVPFVAKV 9 136 511.3062744021716 1020.5979958711432 2 511.3081848025322 MULTI CID FTMS 0 0 0 15924 192241.640625 0.3391792002653564 -5 0.4319839477539062 17 Unmodified _YVVPFVAKV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 39.957323273325 0.0756908302845263 4 [YV]VP{M(Oxidation (M))|F}VAKV 9 0 + 52.763 0.0 0.0 5.1698 5.1698 79.978 0.0 0.0 0.0 12.39667975749498 7.634643315900789 7.634643315900789 7.634643315900789 0 0.2742275032520141 2.0 0.0 0.0 + + [YV]VP{M(Oxidation (M))|F}VAKV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VAKVV[YV];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VAVKV[YV];[YV]VP{M(Oxidation (M))|F}V[KG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VVAKV[YV];[VP]{M(Oxidation (M))|F}AKVV[YV];[YV]VV[KA]VM{I|L};[YV]VP{M(Oxidation (M))|F}[KG]{I|L}V;[YV]VP{M(Oxidation (M))|F}[K{I|L}]GV;[YV]VP{M(Oxidation (M))|F}[KG]V{I|L} 5.1698;4.4217;4.1268;4.0108;3.4419;3.1419;3.1074;3.0944;2.9645;2.8878 +;-;-;-;-;-;-;-;-;- + 813 + 1 0.983 120827.8 1.0 10997 4942 15924 HBL1_DMSO_200M_050219_2,15941 HBL1_DMSO_200M_050219_2,15941,YVVPFVAKV True True YVVPFVAKV 83.86767 511.308184802532 2286598.0 15924.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 6.747959136962891 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15942 83.883 800.0 262020.0 25 0 16092.0 -1 0 143 997.4460062918894 1992.8774596505789 2 997.4450561404228 MULTI CID FTMS 0 0 0 15924 192420.359375 0.7037642396943302 -1 0.1006698608398437 18 4 [TA]{I|L}D{I|L}{I|L}TA 8 -1 79.506 0.0 0.0 3.9895 0.0 0.0 0.0 1191.386772965285 1191.386772965285 40.772824578659055 0.0 0.0 0.0 0 1.5 1.6989700043360187 1.7786596949921218 0.0 [TA]{I|L}D{I|L}{I|L}TA 3.9895 - 12445 1 0.983 137569.8 0.959999978542328 10998 4942 15924 HBL1_DMSO_200M_050219_2,15942 HBL1_DMSO_200M_050219_2,15942, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15943 83.896 779.0 355940.0 25 0 32592.0 22552 LPWPFRNKV 9 162 578.8354587193315 1155.656364505463 2 578.8353759646416 MULTI CID FTMS 0 0 0 15924 180361.03125 0.7692185589549333 -1 0.1006698608398437 19 Unmodified _LPWPFRNKV_ ENSG00000056558|ENST00000373887|TRAF1;nc|ENSG00000056558|Q13077-2|TRAF1 49.55428908609986 0.0413471690215031 4 {I|L}PWV[HV]HR{I|L} 9 6 + 62.93 0.0 0.0 5.4454 5.4454 70.211 0.0 0.0 0.0 11.603031930644086 10.70177569846622 10.70177569846622 0.3395701975960605 0 0.8494850021680094 1.3010299956639813 0.0 1.1861818737241734 {I|L}PWV[HV]HR{I|L};{I|L}P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{M(Oxidation (M))|F}HR{I|L};{I|L}P[R{M(Oxidation (M))|F}]A{M(Oxidation (M))|F}HR{I|L};{I|L}P{[DA]|[EG]}V[HV]HR{I|L};VKDE{I|L}{M(Oxidation (M))|F}HR{I|L};{I|L}PWP{M(Oxidation (M))|F}[RD]{I|L}{I|L};{I|L}PW[KA]{[WS]|[C(Carbamidomethyl (C)){I|L}]}R{I|L};[{I|L}P]E{M(Oxidation (M))|F}[KQ]APKV;{I|L}P{[DA]|[EG]}P[{I|L}V]YR{I|L};{I|L}PW[KA][WR]TV 5.4454;5.416;4.9057;4.8984;4.8323;4.8116;4.7018;4.5927;4.3659;4.3321 -;-;-;-;-;-;-;-;-;- 3129 + 1 0.983 209602.8 1.0 10999 4942 15924 HBL1_DMSO_200M_050219_2,15943 HBL1_DMSO_200M_050219_2,15943,LPWPFRNKV True True FVPEIFHRI 83.896199 578.835375964642 4828963.625 15924.0 nc|ENSG00000177302|Q13472-3|TOP3A;;ENSG00000177302|ENST00000321105|TOP3A;;ENST00000469739.6_1_17:18188617-18210429:-|nuORF;;nc|ENSG00000177302|Q13472-2|TOP3A 3.692050536473592 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15944 83.91 786.0 244630.0 25 0 23451.0 + 16305 IWPNARISVM 10 195 593.8224900911056 1185.630427249011 2 593.8228637576103 MULTI CID FTMS 0 0 0 15924 171515.765625 0.3341870617927415 9 -1.159820556640625 20 Unmodified _IWPNARISVM_ ENSG00000131844|ENST00000340941|MCCC2;nc|ENSG00000131844|Q9HCC0-2|MCCC2 29.081581746732265 0.3152867722954398 4 W{I|L}PQQG[{I|L}P]T{M(Oxidation (M))|F} 10 7 + 67.29 0.0 0.0 5.6755 5.6755 78.56 0.0 0.0 0.0 36.522876677473285 8.454839578393347 8.454839578393347 4.305135399364026 0 0.9929928190999392 2.0 0.8296896906561031 0.5752574989159953 W{I|L}PQQG[{I|L}P]T{M(Oxidation (M))|F};W{I|L}PNAAG[{I|L}P]T{M(Oxidation (M))|F};W{I|L}[QP]KG[{I|L}P]T{M(Oxidation (M))|F};W{I|L}PN[QA][{I|L}P]T{M(Oxidation (M))|F};W{I|L}N{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{I|L}V]T{M(Oxidation (M))|F};W{I|L}[{M(Oxidation (M))|F}T]K{I|L}MT{M(Oxidation (M))|F};W{I|L}V[HK]QQT{M(Oxidation (M))|F};W{I|L}PQQ[YR]PV;W{I|L}PQQG[YV]PV;W{I|L}[{M(Oxidation (M))|F}T]K{I|L}YC{I|L} 5.6755;5.3124;5.2597;4.7578;4.244;4.1288;3.8519;3.651;3.5456;3.4826 -;-;-;-;-;-;-;-;-;- 3379 + 1 0.983 142509.8 1.0 11000 4942 15924 HBL1_DMSO_200M_050219_2,15944 HBL1_DMSO_200M_050219_2,15944,IWPNARISVM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15946 83.914 5.2 9598200.0 25 0 1756500.0 + 4655 DAYVLPKLY 9 61 541.3001215762505 1080.585690219301 2 541.3008300662041 MULTI CID FTMS 0 0 0 15945 7478587.0 0.0522531906180926 6 -0.7002487182617188 1 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 37.97399986684836 0.0865783450051559 4 {[DA]|[EG]}YV 4 5 35.662 0.0 0.0 3.3002 0.0 0.0 0.0 629.3656334168196 629.3656334168196 6.3211367387811634 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YV 3.3002 + + 68 1 0.983 42978.5 1.0 11001 4943 15945 HBL1_DMSO_200M_050219_2,15946 HBL1_DMSO_200M_050219_2,15946,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15947 83.915 10.0 5173500.0 25 0 761440.0 -1 ALMAAPLSL 9 65 451.75274496202985 901.4909369908596 2 451.7529785037041 MULTI CID FTMS 0 0 0 15945 5826205.5 0.4486036606338301 28 -3.138290405273437 2 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 57.814 0.0 0.0 6.4132 6.4132 82.082 0.0 0.0 0.0 8.802112417116064 8.384767769392738 8.384767769392738 4.771212547196626 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPAS{I|L}A{I|L};{[HG]|PP}S{M(Oxidation (M))|F}AS{I|L}A{I|L} 6.4132;5.8839;5.4368;4.6164;4.5198;4.4718;4.1662;4.0871;4.0814;4.0696 -;-;-;-;-;-;-;-;-;- 244 1 0.983 45751.5 1.0 11002 4943 15945 HBL1_DMSO_200M_050219_2,15947 HBL1_DMSO_200M_050219_2,15947,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15948 83.917 4.2 10004000.0 25 0 1845200.0 + 11690 GLFSALSELGL 11 61 553.8085383295695 1105.602523725939 2 553.8088256716728 MULTI CID FTMS 0 0 0 15945 10947663.0 0.9177330290447804 -1 0.1389007568359375 3 Unmodified _GLFSALSELGL_ REV__ENST00000342609.6_1_2:191857981-191858245:-|nuORF 29.081581746732265 0.4093582134107448 4 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}A{I|L}T 7 -1 64.028 0.0 0.0 5.7913 0.0 0.0 0.0 387.1697176568969 387.1697176568969 46.59334151725851 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.8494850021680094 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}A{I|L}T 5.7913 - 288 + 1 0.983 38567.1 1.0 11003 4943 15945 HBL1_DMSO_200M_050219_2,15948 HBL1_DMSO_200M_050219_2,15948,GLFSALSELGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15949 83.918 42.0 1508000.0 25 0 249000.0 + 35886 SVLQSIEKI 9 93 508.8028807159912 1015.5912084987824 2 508.8033019900322 MULTI CID FTMS 0 0 0 15945 1321921.0 1.0 0 0.0 4 Unmodified _SVLQSIEKI_ ENSG00000121931|ENST00000369763|LRIF1 45.69961567697781 0.0497987121815769 4 [VS]{I|L}Q{[TV]|[{I|L}S]}EK{I|L} 9 0 + 68.508 0.0 0.0 6.7457 6.7457 88.492 0.0 0.0 0.0 31.67567563814188 12.252684618815088 12.252684618815088 9.208187539523747 0 0.7742275032520141 2.0 0.7614393726401688 0.75 + + [VS]{I|L}Q{[TV]|[{I|L}S]}EK{I|L};[VS]{I|L}[AG]{[TV]|[{I|L}S]}EK{I|L} 6.7457;5.839 +;- + 227 + 1 0.983 53446.7 1.0 11004 4943 15945 HBL1_DMSO_200M_050219_2,15949 HBL1_DMSO_200M_050219_2,15949,SVLQSIEKI True True SVLQSIEKI 83.917736 508.803301990032 12043996.0 15945.0 ENSG00000121931|ENST00000369763|LRIF1 4.673979123433431 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15950 83.919 63.0 757990.0 25 0 60130.0 + 15354 IPMELVNEV 9 83 522.2758105524888 1042.5370681717775 2 522.2755615115166 MULTI CID FTMS 0 0 0 15945 617698.1875 0.8177738071656034 -1 0.1389007568359375 5 Unmodified _IPMELVNEV_ ENSG00000108773|ENST00000225916|KAT2A;nc|ENSG00000108773|Q92830-2|KAT2A 20.453626601364224 0.2830276176381075 4 [AG]DN{I|L}{I|L}VND{I|L} 10 7 + 43.966 0.0 0.0 4.2172 4.2172 65.958 0.0 0.0 0.0 0.6888128940781257 8.42020706791483 0.6888128940781257 0.6888128940781257 0 0.1150219788552205 0.9208187539523752 0.3252574989159953 0.0 [AG]DN{I|L}{I|L}VND{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}{I|L}VND{I|L};[EP]M{I|L}{I|L}VND{I|L};[AG]DN{I|L}V{I|L}ND{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}V{I|L}ND{I|L};{[DA]|[EG]}GN{I|L}{I|L}VND{I|L};[EP]M{I|L}V{I|L}ND{I|L};[EP]{M(Oxidation (M))|F}P{I|L}VND{I|L};[AG]DN{I|L}{I|L}NVD{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}N{I|L}{I|L}NVD{I|L} 4.2172;4.1511;3.9877;3.9284;3.8624;3.7092;3.6989;3.6989;3.5467;3.4806 -;-;-;-;-;-;-;-;-;- 760 1 0.983 48278.0 1.0 11005 4943 15945 HBL1_DMSO_200M_050219_2,15950 HBL1_DMSO_200M_050219_2,15950,IPMELVNEV False True IPMELVNEV 83.919278 522.275561511517 6480697.5 15945.0 ENSG00000108773|ENST00000225916|KAT2A;;nc|ENSG00000108773|Q92830-2|KAT2A 4.166515191396077 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15951 83.921 63.0 1185100.0 25 0 130320.0 4625 DAYVGYMTI 9 114 516.7388864053415 1031.463219877483 2 516.7394286990166 MULTI CID FTMS 0 0 0 15945 539754.875 0.6609618024776812 -1 0.1389007568359375 6 Unmodified _DAYVGYMTI_ ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-2|FBXO11;nc|ENSG00000138081|Q86XK2-3|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11 20.453626601364224 0.2830276176381075 4 R{I|L}{[WT]|[RM]}PS{I|L} 7 8 21.933 0.0 0.0 2.1263 0.0 0.0 159.9703132386142 0.0 159.9703132386142 0.0 -1.7126590154398436 -1.7126590154398436 0.0 0 0.0 0.0 0.5189301784845296 0.0 R{I|L}{[WT]|[RM]}PS{I|L} 2.1263 - 508 + 1 0.983 64389.6 1.0 11006 4943 15945 HBL1_DMSO_200M_050219_2,15951 HBL1_DMSO_200M_050219_2,15951,DAYVGYMTI False True AVFRELPSL 83.920819 516.739428699017 6628628.0 15945.0 ENST00000477288.5_1_6:30876177-30879964:+|nuORF;;ENSG00000213780|ENST00000259895|GTF2H4 4.008579572041829 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15952 83.923 126.0 651540.0 25 0 87731.0 + 3882 DALDHVIDI 9 94 505.7615163076997 0 505.7613098025322 PEAK CID FTMS 0 0 0 15945 452462.6875 0.4144709346036884 -1 0.1389007568359375 7 Unmodified _DALDHVIDI_ ENSG00000159069|ENST00000325285|FBXW5;ENST00000459905.5_1_9:139835382-139837220:-|nuORF;ENST00000483559.5_1_9:139835382-139837095:-|nuORF 54.773552608820026 0.0223190572393154 4 D{I|L}AD{I|L}V 6 6 37.484 0.0 0.0 3.7131 0.0 0.0 131.0928441354543 249.06345544986564 380.15629958532 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.0 D{I|L}AD{I|L}V 3.7131 - 623 + 1 0.983 67011.5 1.0 11007 4943 15945 HBL1_DMSO_200M_050219_2,15952 HBL1_DMSO_200M_050219_2,15952,DALDHVIDI True True DALDHVIDI 83.923392 505.761309802532 16352859.0 15945.0 ENSG00000159069|ENST00000325285|FBXW5;;ENST00000459905.5_1_9:139835382-139837220:-|nuORF;;ENST00000483559.5_1_9:139835382-139837095:-|nuORF 4.015061537424724 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15953 83.933 544.0 357740.0 25 0 37655.0 + 33565 SILSKDGVLYV 11 182 597.3436073096462 1192.6726616860924 2 597.3432494997978 MULTI CID FTMS 0 0 0 15945 363967.15625 0.8881592382615215 1 -0.1179046630859375 8 Unmodified _SILSKDGVLYV_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87398353-87423749:+|nuORF 62.86856922530385 0.057503257068159 4 {[TV]|[{I|L}S]}{I|L}[QA]S{I|L}S{I|L}YV 11 5 + 84.718 0.0 0.0 7.1032 7.1032 76.616 0.0 0.0 0.0 10.824120262636356 10.109860684774318 10.109860684774318 0.3836439183553608 0 1.9386218330464624 1.6989700043360187 1.8120878602210733 0.0 {[TV]|[{I|L}S]}{I|L}[QA]S{I|L}S{I|L}YV;{[TV]|[{I|L}S]}K[PS]S{I|L}S{I|L}YV;{[TV]|[{I|L}S]}[PS]KS{I|L}S{I|L}YV;{[TV]|[{I|L}S]}KDR{I|L}S{I|L}YV;{[TV]|[{I|L}S]}[QA]{I|L}S{I|L}S{I|L}YV;{[TV]|[{I|L}S]}KDGV{I|L}S{I|L}YV;{[TV]|[{I|L}S]}[QA]S{I|L}{I|L}S{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}[VG]KS{I|L}S{I|L}YV;{NN|[MP]|[D{I|L}]|[EV]}[RK]S{I|L}S{I|L}YV;{[TV]|[{I|L}S]}{I|L}[QA]STV{I|L}YV 7.1032;7.071;6.9995;6.9449;6.6658;6.6578;6.6466;6.1956;5.8967;5.8739 -;-;-;-;-;-;-;-;-;- 6391 1 0.983 144759.9 1.0 11008 4943 15945 HBL1_DMSO_200M_050219_2,15953 HBL1_DMSO_200M_050219_2,15953,SILSKDGVLYV True True SILSKDGVLYV 83.932967 597.343249499798 9657040.0 15945.0 ENST00000454465.1_1_2:87398353-87423749:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 4.5039745171864825 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15954 83.937 222.0 305440.0 25 0 52903.0 16811 KGPHLRSKQL 10 75 388.5714475333833 1162.69251320035 3 388.5711852908134 MULTI CID FTMS 0 0 0 15945 346520.0 0.8367305313483058 1 -0.1179046630859375 9 Unmodified _KGPHLRSKQL_ chr1:159836212-159837085|21|15.52|0.11|7.14|+|2|None,SLAMF8|1 3.5964929083625545 0.7100006075494749 4 {I|L} 1 9 9.8329 0.0 0.0 0.8457 0.0 0.0 1031.597754144489 0.0 1031.597754144489 0.0 2.843181179205061 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.8457 + + 7 + 1 0.983 65552.0 1.0 11009 4943 15945 HBL1_DMSO_200M_050219_2,15954 HBL1_DMSO_200M_050219_2,15954,KGPHLRSKQL False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 15955 83.941 207.0 608930.0 25 0 46998.0 + 24301 MAYPDLNEI 9 142 533.2502681592617 1064.4859833853234 2 533.2496826052666 MULTI CID FTMS 0 0 0 15945 289341.96875 0.0191734295441891 7 -0.8285675048828125 10 Unmodified _MAYPDLNEI_ chr2:230245071-230245863|43|27.19|0.83|5.04|+|ENST00000417495|SP140,SP140;chr2:230245080-230247916|43|10.58|0.48|4.47|+|ENST00000343805|SP140,SP140;chr2:230245940-230248885|37|13.54|0.39|5.14|+|ENST00000417495|SP140,SP140;chr2:230251061-230255452|43|13.88|0.44|4.99|+|ENST00000343805|SP140,SP140;ENSG00000079263|ENST00000392045|SP140;ENST00000543928.5_1_2:231090559-231103146:+|nuORF;nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-4|SP140;nc|ENSG00000079263|Q13342-5|SP140;nc|ENSG00000079263|Q13342-6|SP140 23.1484247019978 0.2366544122328345 4 [{I|L}P]DNHM{M(Oxidation (M))|F}P 8 8 31.043 0.0 0.0 2.9163 0.0 0.0 0.0 110.02764730936477 110.02764730936477 8.277456728880281 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}P]DNHM{M(Oxidation (M))|F}P 2.9163 - 1169 1 0.983 106525.8 1.0 11010 4943 15945 HBL1_DMSO_200M_050219_2,15955 HBL1_DMSO_200M_050219_2,15955,MAYPDLNEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15956 83.952 642.0 250550.0 25 0 24467.0 + 17143 KLIDETQDMLL 11 135 659.8500373631705 1317.6855217931409 2 659.8502075076103 MULTI CID FTMS 0 0 0 15945 273067.875 0.8831837165879013 -1 0.1389007568359375 11 Unmodified _KLIDETQDMLL_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 49.74193281347159 0.1190592179673825 4 {NN|[MP]|[D{I|L}]|[EV]}E{I|L}KTQDM{I|L}{I|L} 11 4 + 110.31 0.0 0.0 8.3718 8.3718 89.861 0.0 0.0 0.0 7.174617874626037 16.575773191777927 7.174617874626037 7.174617874626037 0 1.1109243748081783 1.6989700043360187 2.3243923658886185 0.0 {NN|[MP]|[D{I|L}]|[EV]}E{I|L}KTQDM{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}D{I|L}KTQDM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{I|L}KT[AG]DM{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}KTQDM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}KETQDM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}EKTQDM{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}D{I|L}KT[AG]DM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}TRTQDM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}G[KG]KTQDM{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}VKETQDM{I|L}{I|L} 8.3718;7.8273;7.6791;7.5496;7.5321;7.2906;7.1346;7.0892;6.9946;6.9876 -;-;-;-;-;-;-;-;-;- 7268 1 0.983 129844.6 1.0 11011 4943 15945 HBL1_DMSO_200M_050219_2,15956 HBL1_DMSO_200M_050219_2,15956,KLIDETQDMLL True True KLIDETQDMLL 83.952294 659.85020750761 2813916.25 15945.0 nc|ENSG00000127481|Q5T4S7-2|UBR4;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4 5.398512522379558 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15957 83.958 332.0 472050.0 25 0 60837.0 + 44565 YPFEPPQI 8 137 495.75042385863634 989.4862947840728 2 495.7505676150322 MULTI CID FTMS 0 0 0 15945 256455.734375 0.1819540390082077 -5 0.5154571533203125 12 Unmodified _YPFEPPQI_ ENSG00000077152|ENST00000646651|UBE2T;ENST00000487227.5_1_1:202302298-202304891:-|nuORF 60.38955033654506 0.1153153300159026 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EPPQ{I|L} 8 0 + 63.707 0.0 0.0 6.4384 6.4384 75.756 0.0 0.0 0.0 1.180993120779938 16.40978057358332 1.180993120779938 1.180993120779938 0 0.9896518287104438 1.5228787452803376 0.4247425010840047 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EPPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YEPPQ{I|L};{[QN]|[E{I|L}]|[KN]}MYPPQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EPP[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPP[AG]{I|L};[EP]{M(Oxidation (M))|F}YPPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EPYPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YEPP[AG]{I|L};{[QN]|[E{I|L}]|[KN]}MYPP[AG]{I|L} 6.4384;6.319;5.7106;5.7088;5.5023;5.383;5.1145;5.0788;4.7745;4.7728 +;-;-;-;-;-;-;-;-;- + 1311 1 0.983 121447.6 1.0 11012 4943 15945 HBL1_DMSO_200M_050219_2,15957 HBL1_DMSO_200M_050219_2,15957,YPFEPPQI True True YPFEPPQI 83.958309 495.750567615032 70153194.0 15945.0 ENSG00000077152|ENST00000646651|UBE2T;;ENST00000487227.5_1_1:202302298-202304891:-|nuORF 2.869209289550781 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15958 83.965 393.0 381100.0 25 0 51783.0 + 35799 SVISHLLRV 9 108 341.88211218264064 1022.624507148122 3 341.8818847537041 MULTI CID FTMS 0 0 0 15945 257662.09375 1.0 0 0.0 13 Unmodified _SVISHLLRV_ ENSG00000114520|ENST00000251775|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;nc|ENSG00000114520|O95219-2|SNX4 27.628801355627647 0.1796483985696185 4 [VS]{I|L}SH{I|L}V{I|L}R 9 2 + 66.424 0.0 0.0 6.4955 6.4955 75.66 0.0 0.0 0.0 36.92471268044436 5.406075122407685 5.406075122407685 0.9691001300805624 0 0.3807196863200844 2.0 0.8494850021680094 0.0 [VS]{I|L}SH{I|L}V{I|L}R;[VS]{I|L}SH{I|L}{I|L}VR;[VS]{I|L}SHV{I|L}{I|L}R;[VS]{I|L}SVH{I|L}{I|L}R;[VS]{I|L}VSH{I|L}{I|L}R;[VS]VTH{I|L}V{I|L}R;[VS]VTH{I|L}{I|L}VR;[VS]VTHV{I|L}{I|L}R;[VS]VTVH{I|L}{I|L}R;[VS]V{I|L}SH{I|L}{I|L}R 6.4955;6.4007;6.3233;6.0289;5.7345;5.6135;5.5188;5.4414;5.147;4.8526 -;-;-;-;-;-;-;-;-;- 268 + 1 0.983 123022.0 1.0 11013 4943 15945 HBL1_DMSO_200M_050219_2,15958 HBL1_DMSO_200M_050219_2,15958,SVISHLLRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15959 83.968 154.0 593090.0 25 0 51326.0 + 10475 FTLSHITQL 9 141 530.2958983216123 1058.5772437100245 2 530.2982055544853 MULTI CID FTMS 0 0 0 15945 237056.640625 0.7290583948305349 -1 0.1389007568359375 14 Unmodified _FTLSHITQL_ ENSG00000148484|ENST00000345264|RSU1 61.357469665136826 0.0253304979873734 4 [H{I|L}]ST{I|L}Q{I|L}[{M(Oxidation (M))|F}T] 9 6 + 36.881 0.0 0.0 3.484 3.484 62.411 0.0 0.0 0.0 0.3476210625921183 0.9286373909302624 0.3476210625921183 0.0443219174010778 0 0.0 0.0 1.3001648626366045 0.5796896906561032 [H{I|L}]ST{I|L}Q{I|L}[{M(Oxidation (M))|F}T];[H{I|L}]S{I|L}TQ{I|L}[{M(Oxidation (M))|F}T];[HS]{I|L}T{I|L}Q{I|L}[{M(Oxidation (M))|F}T];[HS]{I|L}{I|L}TQ{I|L}[{M(Oxidation (M))|F}T];[H{I|L}]ST{I|L}{M(Oxidation (M))|F}TQ{I|L};[H{I|L}]S{I|L}T{M(Oxidation (M))|F}TQ{I|L};[{I|L}T][HS]{I|L}Q{I|L}[{M(Oxidation (M))|F}T];[HS]{I|L}T{I|L}{M(Oxidation (M))|F}TQ{I|L};[{I|L}T][HV]TQ{I|L}[{M(Oxidation (M))|F}T];[HS]{I|L}{I|L}T{M(Oxidation (M))|F}TQ{I|L} 3.484;3.4798;3.4511;3.447;3.3655;3.3613;3.3345;3.3327;3.3304;3.3285 -;-;-;-;-;-;-;-;-;- 1744 1 0.983 75167.8 1.0 11014 4943 15945 HBL1_DMSO_200M_050219_2,15959 HBL1_DMSO_200M_050219_2,15959,FTLSHITQL True True FTLSHITQL 83.968411 530.298205554485 3543129.0 15945.0 ENSG00000148484|ENST00000345264|RSU1 3.4487659533818564 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15960 83.983 800.0 319830.0 25 0 24835.0 + 42909 VVPQQLLTV 9 184 498.8080665076233 995.6015800820468 2 498.8086425662041 MULTI CID FTMS 0 0 0 15945 166343.484375 0.2693214000606543 -3 0.35491943359375 15 Unmodified _VVPQQLLTV_ ENSG00000072310|ENST00000261646|SREBF1;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1 54.773552608820026 0.0299037012502309 4 [QP]Q{I|L}{I|L}TVVV 9 4 + 57.928 0.0 0.0 5.8184 5.8184 73.338 0.0 0.0 0.0 1.1531133696193052 9.577570906191896 1.1531133696193052 1.1531133696193052 0 0.242992819099939 0.5528419686577808 0.6861818737241735 0.5994850021680094 [QP]Q{I|L}{I|L}TVVV;VV[NG]P{I|L}TVVV;[{I|L}P]NAA{I|L}TVVV;[QP][AG]{I|L}{I|L}TVVV;[{I|L}P]QQ{I|L}TVVV;[QP]Q{I|L}{I|L}VTVV;VV[NG]P{I|L}VTVV;[QP]VAA{I|L}TVVV;[{I|L}A]GQP{I|L}TVVV;[VG]{[NV]|[RG]}P{I|L}TVVV 5.8184;5.7026;5.0761;4.8935;4.8147;4.6897;4.5739;4.4988;4.3402;4.2587 -;-;-;-;-;-;-;-;-;- 4992 1 0.983 191084.8 0.9100000262260436 11015 4943 15945 HBL1_DMSO_200M_050219_2,15960 HBL1_DMSO_200M_050219_2,15960,VVPQQLLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15961 83.997 800.0 260800.0 25 0 55376.0 + 9247 FGYPFRLNEA 10 154 607.3032497505823 1212.5919465679644 2 607.3046752810478 MULTI CID FTMS 0 0 0 15945 163805.828125 0.8933494649527134 -1 0.1389007568359375 16 Unmodified _FGYPFRLNEA_ ENSG00000008282|ENST00000455385|SYPL1;nc|ENSG00000008282|Q16563|SYPL1 44.94466952835103 0.1098215951422272 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}AYGE 10 7 + 55.398 0.0 0.0 4.5685 4.5685 75.307 0.0 0.0 0.0 5.484550065040281 5.484550065040281 5.484550065040281 5.484550065040281 0 0.3494850021680094 1.3010299956639813 0.8807196863200843 1.024227503252014 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}AYGE;{M(Oxidation (M))|F}GYP{I|L}{I|L}[KC]SW;{M(Oxidation (M))|F}AN{I|L}R{M(Oxidation (M))|F}PYW;{M(Oxidation (M))|F}GYP[RK]PYW;{M(Oxidation (M))|F}GYP[RK]YPW;{M(Oxidation (M))|F}AKKDQQYW;{M(Oxidation (M))|F}AKKDT[KC]SW;{M(Oxidation (M))|F}GQ{I|L}R{M(Oxidation (M))|F}PYW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VSYGE;{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}AYGE 4.5685;4.1162;3.5818;3.533;3.5308;3.5244;3.3603;3.3211;3.241;3.2023 -;-;-;-;-;-;-;-;-;- 1579 1 0.983 152516.3 0.9200000166893004 11016 4943 15945 HBL1_DMSO_200M_050219_2,15961 HBL1_DMSO_200M_050219_2,15961,FGYPFRLNEA True True FGYPFRLNEA 83.997242 607.304675281048 2043673.875 15945.0 ENSG00000008282|ENST00000455385|SYPL1;;nc|ENSG00000008282|Q16563|SYPL1 7.3405830065409345 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15962 84.011 800.0 235400.0 25 0 27971.0 + 33330 SFYEKGPLTF 10 195 594.8002118324846 0 594.8004028201103 PEAK CID FTMS 0 0 0 15945 124771.8984375 0.9631939691288032 -1 0.1389007568359375 17 Unmodified _SFYEKGPLTF_ ENSG00000118620|ENST00000261560|ZNF430;ENST00000595833.1_1_19:21203606-21216480:+|nuORF 107.09958533191995 6.489014742885909e-05 4 WPEKG[{I|L}P]T 8 4 59.158 0.0 0.0 4.9814 0.0 0.0 114.0577076075418 162.05648218326408 276.1141897908059 0.0 0.0 0.0 0.0 0 1.4916440611282624 0.0 1.8873453591370688 0.3252574989159953 WPEKG[{I|L}P]T 4.9814 - 3761 + 1 0.983 140118.6 0.8600000143051147 11017 4943 15945 HBL1_DMSO_200M_050219_2,15962 HBL1_DMSO_200M_050219_2,15962,SFYEKGPLTF True True SFYEKGPLTF 84.011073 594.80040282011 1375934.625 15945.0 ENSG00000118620|ENST00000261560|ZNF430;;ENST00000595833.1_1_19:21203606-21216480:+|nuORF 6.701485474904378 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15963 84.026 800.0 228420.0 25 0 39725.0 + 30799 RIFLEFERV 9 140 604.8441810230825 1207.6738091129648 2 604.8453857302666 MULTI CID FTMS 0 0 0 15945 95729.78125 0.9024728678036966 -1 0.1389007568359375 18 Unmodified _RIFLEFERV_ ENSG00000134453|ENST00000379888|RBM17;ENST00000465906.5_1_10:6155352-6157276:+|nuORF;ENST00000467080.1_1_10:6155999-6157276:+|nuORF;ENST00000476706.5_1_10:6154982-6157516:+|nuORF 40.72490554402381 0.0714771638475563 4 VGV{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[KQ]VR 10 8 + 81.525 0.0 0.0 6.7506 6.7506 80.522 0.0 0.0 0.0 22.998037644757048 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 1.2614393726401687 1.2218487496163564 0.5 1.1549471895720984 VGV{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[KQ]VR;VGV{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[KQ]RV;VGV{M(Oxidation (M))|F}{M(Oxidation (M))|F}[QA][VS]VR;VGV{M(Oxidation (M))|F}{M(Oxidation (M))|F}[QA][VS]RV;VR{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[KQ]VR;VR{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[KQ]RV;VG{I|L}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}[KQ]VR;VG{I|L}{M(Oxidation (M))|F}A{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VS]VR;VGV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}EVVTV;VG{I|L}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}[KQ]RV 6.7506;6.5013;5.5588;5.3095;5.2307;4.9815;4.9148;4.8874;4.7887;4.6655 -;-;-;-;-;-;-;-;-;- 2099 + 1 0.983 133324.4 0.7799999713897705 11018 4943 15945 HBL1_DMSO_200M_050219_2,15963 HBL1_DMSO_200M_050219_2,15963,RIFLEFERV True True RIFLEFERV 84.026079 604.845385730267 1108563.875 15945.0 ENST00000465906.5_1_10:6155352-6157276:+|nuORF;;ENST00000476706.5_1_10:6154982-6157516:+|nuORF;;ENSG00000134453|ENST00000379888|RBM17;;ENST00000467080.1_1_10:6155999-6157276:+|nuORF;;chr10:6115311-6115529|20|15.15|0.35|5.42|+|2|RBM17,None|1 5.804789543151856 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15964 84.028 68.0 681770.0 25 0 91426.0 + 42790 VVISSDGQFAL 11 75 568.3034049009416 1134.592256868683 2 568.3024169802666 MULTI CID FTMS 0 0 0 15945 99347.109375 0.0262374453241353 -3 0.35491943359375 19 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 29.081581746732265 0.4093582134107448 4 VV{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{[QG]|[NA]}H 8 6 30.903 0.0 0.0 2.7237 0.0 0.0 0.0 209.09314733182683 209.09314733182683 16.923487412610356 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 VV{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{[QG]|[NA]}H 2.7237 - 137 1 0.983 39076.8 1.0 11019 4943 15945 HBL1_DMSO_200M_050219_2,15964 HBL1_DMSO_200M_050219_2,15964,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15966 84.032 7.8 7457800.0 25 0 908640.0 + 9878 FPFLVQSK 8 71 483.2765192074866 964.5384854817733 2 483.2766601443291 MULTI CID FTMS 0 0 0 15965 6639231.5 0.9212236903997104 1 -0.119232177734375 1 Unmodified _FPFLVQSK_ REV__ENSG00000254221|ENST00000523390|PCDHGB1;REV__nc|ENSG00000254221|Q9Y5G3-2|PCDHGB1 36.04419817259434 0.3004715606373109 4 [KG]{M(Oxidation (M))|F}{I|L}GTVP{M(Oxidation (M))|F} 9 -1 + 34.792 0.0 0.0 3.6071 3.6071 68.753 0.0 0.0 0.0 0.991531334132894 7.166987712964506 0.991531334132894 3.010299956639816 0 0.0 0.0 0.0 0.0 [KG]{M(Oxidation (M))|F}{I|L}GTVP{M(Oxidation (M))|F};[KG]{I|L}{M(Oxidation (M))|F}GTVP{M(Oxidation (M))|F};{M(Oxidation (M))|F}[{I|L}T]TG{I|L}[WK];[YV]VTG{I|L}[WK];{M(Oxidation (M))|F}[{I|L}T]TG{[QV]|[N{I|L}]|[RA]|[KV]}TV;[YV]VTG{[QV]|[N{I|L}]|[RA]|[KV]}TV 3.6071;3.295;3.1748;2.2398;1.8848;0.9498 -;-;-;-;-;- 214 1 0.983 50601.9 1.0 11020 4944 15965 HBL1_DMSO_200M_050219_2,15966 HBL1_DMSO_200M_050219_2,15966,FPFLVQSK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15967 84.033 39.0 968070.0 25 0 59174.0 + 45128 YQAPDIDVQL 10 77 581.2920041780851 1160.56945542297 2 581.2932617068291 MULTI CID FTMS 0 0 0 15965 934890.3125 0.0442447324843658 4 -0.4689178466796875 2 Unmodified _YQAPDIDVQL_ ENSG00000105373|ENST00000246802|NOP53;ENST00000600410.5_1_19:48257983-48259211:+|nuORF 16.149105407346934 0.5765757077271437 4 CQ{I|L} 3 8 13.913 0.0 0.0 1.1988 0.0 0.0 798.410197465742 0.0 798.410197465742 0.0 -1.7385695813445068 -1.7385695813445068 0.0 0 0.0 0.0 0.0 0.4247425010840047 CQ{I|L} 1.1988 - 122 + 1 0.983 37641.1 1.0 11021 4944 15965 HBL1_DMSO_200M_050219_2,15967 HBL1_DMSO_200M_050219_2,15967,YQAPDIDVQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15968 84.034 17.0 3193500.0 25 0 251730.0 + 32041 RVLDDAWDL 9 56 551.7805371848922 1101.5465214365845 2 551.7810546755791 MULTI CID FTMS 0 0 0 15965 2431631.75 1.0 0 0.0 3 Unmodified _RVLDDAWDL_ ENSG00000214279|ENST00000640237|SCART1;ENST00000463137.5_1_10:135271820-135273512:+|nuORF;ENST00000482993.6_3_10:135272457-135273512:+|nuORF;ENST00000488261.6_3_10:135271820-135304727:+|nuORF;nc|ENSG00000214279|Q4G0T1-3|SCART1 23.78978130925829 0.2284941198415988 4 {NN|[MP]|[D{I|L}]|[EV]}[RV]DAWD{I|L} 9 3 + 61.985 0.0 0.0 5.6271 5.6271 80.835 0.0 0.0 0.0 9.021271468453447 51.016055957898416 9.021271468453447 6.478174818886373 0 0.8807196863200843 1.5228787452803376 0.0 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}[RV]DAWD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]WWD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]W{[DA]|[EG]}D{I|L};[WD]A{I|L}{I|L}AWD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]D{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]W[DG]E{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]DWW{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]DA{[SA]|[TG]}QQ;{NN|[MP]|[D{I|L}]|[EV]}[RV]W{[SA]|[TG]}QQ;{NN|[MP]|[D{I|L}]|[EV]}[RV]D[QT]QQ 5.6271;5.039;4.1982;3.8954;3.1977;3.1977;3.1562;2.1296;1.5366;1.5366 -;-;-;-;-;-;-;-;-;- 177 1 0.983 48634.5 1.0 11022 4944 15965 HBL1_DMSO_200M_050219_2,15968 HBL1_DMSO_200M_050219_2,15968,RVLDDAWDL False True RVLDDAWDL 84.034458 551.781054675579 21969502.0 15965.0 ENST00000463137.5_1_10:135271820-135273512:+|nuORF;;ENST00000488261.6_3_10:135271820-135304727:+|nuORF;;nc|ENSG00000214279|Q4G0T1-3|SCART1;;ENSG00000214279|ENST00000640237|SCART1;;ENST00000482993.6_3_10:135272457-135273512:+|nuORF 5.849478244781494 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15969 84.036 53.0 1284000.0 25 0 162750.0 + 41469 VPLPNVPSI 9 88 468.2818541646448 934.5491553960896 2 468.2816345095634 MULTI CID FTMS 0 0 0 15965 1165661.625 0.6455968253003419 3 -0.323150634765625 4 Unmodified _VPLPNVPSI_ ENSG00000101421|ENST00000217402|CHMP4B;nc|ENSG00000258469|P59074|CHMP4BP1 57.47134341890925 0.0274820932774257 4 [NP]V[{I|L}P]VPS{I|L} 9 3 + 49.969 0.0 0.0 5.3469 5.3469 75.547 0.0 0.0 0.0 7.7815125038364386 20.003406882387225 7.7815125038364386 3.252574989159953 0 1.1237125054200234 0.8538719643217619 0.3807196863200844 0.3252574989159953 [NP]V[{I|L}P]VPS{I|L};[NP]VV[{I|L}P]PS{I|L};[NP][{I|L}P]VVPS{I|L};[VP]N[{I|L}P]VPS{I|L};[VP]NV[{I|L}P]PS{I|L};[NP]V[{I|L}P]S[VP]{I|L};[{I|L}P][NP]VVPS{I|L};[{I|L}P]V[NP]VPS{I|L};[VP][QP]VVPS{I|L};[NP]VV[TP][VP]{I|L} 5.3469;4.9988;4.599;4.5142;4.1662;4.0884;4.0074;3.851;3.7663;3.7404 -;-;-;-;-;-;-;-;-;- 411 1 0.983 59316.8 1.0 11023 4944 15965 HBL1_DMSO_200M_050219_2,15969 HBL1_DMSO_200M_050219_2,15969,VPLPNVPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15970 84.037 47.0 1394100.0 25 0 335660.0 + + 9342 FIPPDGNFRL 10 41 588.3142142641116 1174.613875595023 2 588.3143798708916 MULTI CID FTMS 0 0 0 15965 1132627.5 0.9469697088458648 1 -0.119232177734375 5 Unmodified _FILLLCYYQ_ ENST00000480373.1_1_10:75888732-75889691:-|nuORF;nc|ENSG00000070718|P53677-2|AP3M2;ENSG00000070718|ENST00000396926|AP3M2;ENSG00000185009|ENST00000355264|AP3M1 11.640296217721598 0.521594087909532 4 DPP{[QN]|[E{I|L}]|[KN]} 5 -1 26.466 0.0 0.0 2.2532 0.0 0.0 605.3287526203429 0.0 605.3287526203429 0.0 19.47621246364342 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 DPP{[QN]|[E{I|L}]|[KN]} 2.2532 - 24 1 0.983 57551.4 1.0 11024 4944 15965 HBL1_DMSO_200M_050219_2,15970 HBL1_DMSO_200M_050219_2,15970,FILLLCYYQ False False FIPPDGNFRL 84.037108 588.314379870892 97933110.0 15965.0 ENST00000480373.1_1_10:75888732-75889691:-|nuORF;;nc|ENSG00000070718|P53677-2|AP3M2;;ENSG00000070718|ENST00000396926|AP3M2;;ENSG00000185009|ENST00000355264|AP3M1 6.3400319417317705 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15971 84.038 46.0 1226000.0 25 0 237010.0 + 3727 DAFRQPSLFY 10 61 622.3089899410054 1242.6034269488107 2 622.3095580935478 MULTI CID FTMS 0 0 0 15965 1089142.25 0.9174769268158158 1 -0.119232177734375 6 Unmodified _DAFRQPSLFY_ ENSG00000197442|ENST00000359015|MAP3K5 32.037481411007896 0.2488723560272515 4 Q[PS]{I|L}{M(Oxidation (M))|F}Y 6 4 42.664 0.0 0.0 3.4334 0.0 0.0 489.23399550605626 0.0 489.23399550605626 0.0 33.19984993812689 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 + Q[PS]{I|L}{M(Oxidation (M))|F}Y 3.4334 + + 97 1 0.983 46594.6 1.0 11025 4944 15965 HBL1_DMSO_200M_050219_2,15971 HBL1_DMSO_200M_050219_2,15971,DAFRQPSLFY False True DAFRQPSLFY 84.038371 622.309558093548 38480505.0 15965.0 ENSG00000197442|ENST00000359015|MAP3K5 9.785876909891764 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15972 84.04 56.0 1247100.0 25 0 139340.0 + + -1 SVISHLLRV 9 90 512.236483035692 1022.458413138184 2 512.2375976443291 MULTI CID FTMS 0 0 0 15965 1015965.5 0.3885205487886141 -2 0.256805419921875 7 Oxidation (M) _AM(Oxidation (M))QLMLWD_ ENSG00000114520|ENST00000251775|SNX4;nc|ENSG00000114520|O95219-2|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF 13.50788311687929 0.7113601687236069 4 {[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}{I|L} 5 -1 40.393 0.0 0.0 3.9505 0.0 0.0 0.0 447.1366717653903 447.1366717653903 22.46839269034524 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.5242275032520141 0.0 {[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}{I|L} 3.9505 - 239 1 0.983 58509.8 1.0 11026 4944 15965 HBL1_DMSO_200M_050219_2,15972 HBL1_DMSO_200M_050219_2,15972,AMQLMLWD False False SVISHLLRV 84.039802 512.237597644329 1471845.375 15965.0 ENSG00000114520|ENST00000251775|SNX4;;nc|ENSG00000114520|O95219-2|SNX4;;ENST00000471751.5_1_3:125166625-125239024:-|nuORF 0.9047247966130576 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15973 84.041 50.0 1236800.0 25 0 125140.0 + 30104 QVIEELFKA 9 91 538.8022072329247 1075.5898615326494 2 538.8035766482353 MULTI CID FTMS 0 0 0 15965 669815.5 1.0 0 0.0 8 Unmodified _QVIEELFKA_ ENSG00000137513|ENST00000281038|NARS2;nc|ENSG00000137513|Q96I59-2|NARS2 24.881564428377168 0.2146028316269493 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EE{I|L}{M(Oxidation (M))|F}KA 9 0 + 63.911 0.0 0.0 5.9419 5.9419 88.827 0.0 0.0 0.0 38.275779165182726 9.867078345216775 9.867078345216775 18.226825097560425 0 0.2742275032520141 1.6989700043360187 0.3494850021680094 0.2302046884880938 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EE{I|L}{M(Oxidation (M))|F}KA;[KP]P{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}KA;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}S{M(Oxidation (M))|F}KA;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[TV]|[{I|L}S]}[NG]{M(Oxidation (M))|F}KA;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[QN]|[E{I|L}]|[KN]}[QP][H{I|L}];[KP][R{I|L}]{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}KA 5.9419;4.2473;3.9188;3.0626;1.4475;0.41205 +;-;-;-;-;- + 242 + 1 0.983 53349.9 1.0 11027 4944 15965 HBL1_DMSO_200M_050219_2,15973 HBL1_DMSO_200M_050219_2,15973,QVIEELFKA False True QVIEELFKA 84.041129 538.803576648235 5710007.5 15965.0 nc|ENSG00000137513|Q96I59-2|NARS2;;ENSG00000137513|ENST00000281038|NARS2 6.224644660949707 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15974 84.044 122.0 639320.0 25 0 119250.0 + 9687 FLREYFERL 9 68 424.8960487532812 1271.6663168600437 3 424.8961364626884 MULTI CID FTMS 0 0 0 15965 395434.65625 0.3554669718974005 2 -0.2366409301757812 9 Unmodified _FLREYFERL_ ENSG00000108946|ENST00000589228|PRKAR1A;ENST00000592194.1_1_17:66508623-66511738:+|nuORF;nc|ENSG00000108946|P10644-2|PRKAR1A 49.52724829834842 0.0414064571532091 4 {M(Oxidation (M))|F}{I|L}REY{M(Oxidation (M))|F}E{I|L}R 9 2 + 72.431 0.0 0.0 5.6958 5.6958 77.151 0.0 0.0 0.0 53.30152905678226 15.30730649285598 15.30730649285598 3.3226467981605623 0 0.8182503180159344 0.0 1.9802046884880933 0.3054621874040891 {M(Oxidation (M))|F}{I|L}REY{M(Oxidation (M))|F}E{I|L}R;{M(Oxidation (M))|F}{I|L}REY{M(Oxidation (M))|F}{I|L}ER;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YEE{I|L}R;{M(Oxidation (M))|F}{I|L}R{M(Oxidation (M))|F}YE{I|L}ER;{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}R{I|L}E;{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}[VG]{I|L}E;{[RE]|[WV]}{I|L}Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}R{I|L}E;{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}YER{I|L}{M(Oxidation (M))|F};{[RE]|[WV]}{I|L}Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}[VG]{I|L}E;{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}YE[VG]{I|L}{M(Oxidation (M))|F} 5.6958;5.4345;5.0724;4.8112;4.292;3.5679;3.3807;2.7127;2.6566;1.9886 -;-;-;-;-;-;-;-;-;- 344 + 1 0.983 68620.9 1.0 11028 4944 15965 HBL1_DMSO_200M_050219_2,15974 HBL1_DMSO_200M_050219_2,15974,FLREYFERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15975 84.048 216.0 538190.0 25 0 86736.0 + 41859 VPYLVGQVV 9 128 487.28940627416745 972.5642596151348 2 487.2895080447197 MULTI CID FTMS 0 0 0 15965 393035.0 0.0612859914960394 3 -0.323150634765625 10 Unmodified _VPYLVGQVV_ ENSG00000126088|ENST00000246337|UROD;ENST00000494399.5_1_1:45478966-45479784:+|nuORF 34.18733598223924 0.1073653526364521 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV 9 2 + 47.87 0.0 0.0 4.9221 4.9221 70.369 0.0 0.0 0.0 10.122344564170112 3.480137174129325 3.480137174129325 1.6452935963211246 0 0.6989700043360187 0.6777807052660807 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}VGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGVQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GQVVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGN{I|L}VV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VVG[AG]VV;[VP]Y{I|L}VGQVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GVQVV;[VP]Y{I|L}GQVVV 4.9221;4.7529;4.4315;4.303;4.2623;3.9935;3.9753;3.8813;3.8124;3.7121 -;-;-;-;-;-;-;+;-;- + 1674 1 0.983 92770.6 1.0 11029 4944 15965 HBL1_DMSO_200M_050219_2,15975 HBL1_DMSO_200M_050219_2,15975,VPYLVGQVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15976 84.05 101.0 473780.0 25 0 59098.0 + 12388 SAIDPEAIPVKL 12 55 626.8608528952981 0 626.8605834841728 PEAK CID FTMS 0 0 0 15965 342683.8125 1.0 0 0.0 11 Unmodified _GTIEILLAYLF_ ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;ENST00000484023.1_1_3:194151670-194152613:-|nuORF;nc|ENSG00000133657|Q9H7F0|ATP13A3 16.149105407346934 0.3934762919021404 4 {I|L}DPEA{I|L}[VP]K 9 9 30.951 0.0 0.0 2.4727 0.0 0.0 158.06879944118356 128.0723055475219 286.1411049887055 0.0 0.0 0.0 0.0 0 2.0924778212679485 0.0 0.0 0.2742275032520141 {I|L}DPEA{I|L}[VP]K 2.4727 - 132 + 1 0.983 43965.9 1.0 11030 4944 15965 HBL1_DMSO_200M_050219_2,15976 HBL1_DMSO_200M_050219_2,15976,GTIEILLAYLF False False SAIDPEAIPVKL 84.04991 626.860583484173 2867980.0 15965.0 ENSG00000133657|ENST00000645319|ATP13A3;;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;;ENST00000484023.1_1_3:194151670-194152613:-|nuORF;;nc|ENSG00000133657|Q9H7F0|ATP13A3 8.253087202707926 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15977 84.052 119.0 323570.0 25 0 19684.0 + 29803 QQFQEPFVAV 10 80 596.8035450280076 1191.5925371228152 2 597.3054687380791 MULTI CID FTMS 0 0 0 15965 302618.65625 0.3286348715378588 -2 0.256805419921875 12 Unmodified _QQFQEPFVAV_ ENSG00000121022|ENST00000357849|COPS5;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 39.94969957227396 0.1580982266129622 4 {[TV]|[{I|L}S]}{I|L}[DC]EP{M(Oxidation (M))|F}[R{I|L}] 10 8 + 38.381 0.0 0.0 3.221 3.221 69.548 0.0 0.0 0.0 4.273174902439571 5.14445509211555 4.273174902439571 4.273174902439571 0 0.0 1.5228787452803376 0.9049471895720984 0.0 {[TV]|[{I|L}S]}{I|L}[DC]EP{M(Oxidation (M))|F}[R{I|L}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WT]|[RM]}EP{M(Oxidation (M))|F}[R{I|L}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WT]|[RM]}E[C(Carbamidomethyl (C))K][KP] 3.221;2.8624;1.3899 -;-;- 221 1 0.983 35907.8 1.0 11031 4944 15965 HBL1_DMSO_200M_050219_2,15977 HBL1_DMSO_200M_050219_2,15977,QQFQEPFVAV False True QQFQEPFVAV 84.052389 596.8045 11688003.0 15965.0 ENSG00000121022|ENST00000357849|COPS5;;ENST00000521386.5_1_8:67958045-67971691:-|nuORF;;ENST00000521509.5_1_8:67955470-67971691:-|nuORF 6.493701299031575 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15978 84.063 614.0 167830.0 25 0 17788.0 + 2289 AQIDDDVFDKI 11 121 639.8145814262969 1277.6146099193936 2 639.8152343630791 MULTI CID FTMS 0 0 0 15965 289405.8125 0.6376961705395354 1 -0.119232177734375 13 Unmodified _AQIDDDVFDKI_ ENSG00000109805|ENST00000251496|NCAPG;ENST00000513226.1_1_4:17812700-17814869:+|nuORF 53.4695610476455 0.0984156443811599 4 [QA]{I|L}DDDV{M(Oxidation (M))|F}DK{I|L} 11 0 [QA] + + 74.423 18.015 9.0484 5.8251 5.8251 56.008 0.0 0.0 0.0 0.0 21.33042438954892 0.0 0.0 0 1.3807196863200843 0.0 1.2302046884880935 0.0 + + [QA]{I|L}DDDV{M(Oxidation (M))|F}DK{I|L} 5.8251 + + 1284 + 1 0.983 80422.3 1.0 11032 4944 15965 HBL1_DMSO_200M_050219_2,15978 HBL1_DMSO_200M_050219_2,15978,AQIDDDVFDKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15979 84.074 632.0 247170.0 25 0 9854.7 + 30673 RFPEELTQTF 10 147 634.3192248256998 1266.6238967181996 2 634.8211547732353 MULTI CID FTMS 0 0 0 15965 272727.53125 0.8303524731328684 8 -0.957183837890625 14 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 63.22749603027936 0.0281198777558511 4 [DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F} 10 5 + 76.052 0.0 0.0 6.0043 6.0043 79.22 0.0 0.0 0.0 3.92532998048425 7.614393726401687 3.92532998048425 3.92532998048425 0 1.110924374808178 1.3010299956639813 1.2249073637206092 0.75 [DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TQT{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}E{I|L}TQT{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}M{[VA]|[{I|L}G]}E{I|L}TQT{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{[VA]|[{I|L}G]}E{I|L}TQT{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}][EP]E{I|L}TQT{M(Oxidation (M))|F};[NP]T{M(Oxidation (M))|F}[KA]{I|L}TQT{M(Oxidation (M))|F};[{I|L}T]T{M(Oxidation (M))|F}[TA]HTQT{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}[W{I|L}]{I|L}TTQ{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}E{I|L}TTQ{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[RE]|[WV]}E{I|L}TQT{M(Oxidation (M))|F} 6.0043;5.6944;5.4738;5.4064;5.3716;5.2119;5.1972;5.1746;5.1406;5.1249 -;-;-;-;+;-;-;-;-;- + 7749 1 0.983 122093.0 1.0 11033 4944 15965 HBL1_DMSO_200M_050219_2,15979 HBL1_DMSO_200M_050219_2,15979,RFPEELTQTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15980 84.087 737.0 341890.0 25 0 73194.0 + 45719 YYFDSYAHF 9 158 606.754079878783 1211.493606824366 2 606.7540161013603 MULTI CID FTMS 0 0 0 15965 185473.078125 1.0 0 0.0 15 Unmodified _YYFDSYAHF_ ENSG00000111218|ENST00000382622|PRMT8;ENSG00000126457|ENST00000454376|PRMT1;ENST00000261252.4_1_12:3649876-3661973:+|nuORF;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;ENST00000543701.5_1_12:3600779-3659332:+|nuORF;nc|ENSG00000111218|Q9NR22-2|PRMT8;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;nc|ENSG00000126457|Q99873-5|PRMT1 74.39630413441286 0.0193995060682538 4 YY{M(Oxidation (M))|F}DSYA{M(Oxidation (M))|F}H 9 2 + 88.063 0.0 0.0 7.2689 7.2689 92.693 0.0 0.0 0.0 52.23705952196511 8.830080363116721 8.830080363116721 13.794566029780242 0 0.7059771852360797 2.0 1.524227503252014 0.0 YY{M(Oxidation (M))|F}DSYA{M(Oxidation (M))|F}H;YY{M(Oxidation (M))|F}DSY{[{M(Oxidation (M))|F}H]|[RQ]}A;YY{M(Oxidation (M))|F}DQQYW;YY{M(Oxidation (M))|F}DS[WQ]{[CT]|[{M(Oxidation (M))|F}G]};YY{M(Oxidation (M))|F}DT[YG]{M(Oxidation (M))|F}H;YY{M(Oxidation (M))|F}DT{[WN]|[YH]}{[CT]|[{M(Oxidation (M))|F}G]};YY{M(Oxidation (M))|F}DQQ[DP]H;YY{M(Oxidation (M))|F}DT[C(Carbamidomethyl (C))K]C{I|L};YY{M(Oxidation (M))|F}DQQ{[{M(Oxidation (M))|F}C]|[YS]}V;YY[WY]YA{M(Oxidation (M))|F}H 7.2689;6.1303;6.0205;5.5801;5.4527;4.8147;4.5704;4.5379;4.4251;4.1768 -;-;-;-;-;-;-;-;-;- 2763 + 1 0.983 185036.5 1.0 11034 4944 15965 HBL1_DMSO_200M_050219_2,15980 HBL1_DMSO_200M_050219_2,15980,YYFDSYAHF True True YYFDSYAHF 84.086948 606.75401610136 1578762.875 15965.0 ENST00000543701.5_1_12:3600779-3659332:+|nuORF;;ENSG00000126457|ENST00000454376|PRMT1;;ENST00000261252.4_1_12:3649876-3661973:+|nuORF;;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;;nc|ENSG00000126457|Q99873-5|PRMT1;;nc|ENSG00000126457|Q99873-3|PRMT1;;nc|ENSG00000111218|Q9NR22-2|PRMT8;;nc|ENSG00000126457|Q99873-2|PRMT1;;ENSG00000111218|ENST00000382622|PRMT8 6.978696505228679 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15981 84.09 160.0 340370.0 25 0 33989.0 + 44161 YLDPSVLSGV 10 93 525.2802678360537 1048.5459827389072 2 525.2791625857353 MULTI CID FTMS 0 0 0 15965 181804.09375 0.9258751579933076 -1 0.1179046630859375 16 Unmodified _YLDPSVLSGV_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 46.020951573049366 0.1035046897853725 4 YH{I|L}SGV 6 5 32.802 0.0 0.0 3.1283 0.0 0.0 374.2167489665681 0.0 374.2167489665681 0.0 10.581376026216091 0.0 0.0 0 0.0 0.0 0.9436726795685344 0.0 YH{I|L}SGV 3.1283 - 280 + 1 0.983 47477.8 1.0 11035 4944 15965 HBL1_DMSO_200M_050219_2,15981 HBL1_DMSO_200M_050219_2,15981,YLDPSVLSGV True True YLDPSVLSGV 84.09012 525.279162585735 1750424.5 15965.0 nc|ENSG00000170540|Q15041-3|ARL6IP1;;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;;ENSG00000170540|ENST00000304414|ARL6IP1;;nc|ENSG00000170540|Q15041-2|ARL6IP1 6.678936163584392 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15982 84.104 800.0 171250.0 25 0 18954.0 + 42772 VVIGADTIVTV 11 171 543.8243154254932 1085.6340779177865 2 543.8248779177666 MULTI CID FTMS 0 0 0 15965 135585.515625 0.1117244541289057 12 -1.4918060302734375 17 Unmodified _VVIGADTIVTV_ ENSG00000169093|ENST00000381317|ASMTL;nc|ENSG00000292339|O95671-3|ASMTL 52.268347100219714 0.1050679570471992 4 {[QN]|[E{I|L}]|[KN]}NTVV{I|L}[W{I|L}] 9 9 + 39.491 0.0 0.0 3.6376 3.6376 73.135 0.0 0.0 0.0 3.494850021680101 12.402048439838758 3.494850021680101 6.43553046518285 0 0.0 1.154901959985743 1.6549471895720984 0.0 {[QN]|[E{I|L}]|[KN]}NTVV{I|L}[W{I|L}];{[QN]|[E{I|L}]|[KN]}NTV{I|L}V[W{I|L}];{[QN]|[E{I|L}]|[KN]}NT{I|L}VV[W{I|L}];{[QN]|[E{I|L}]|[KN]}GGTVV{I|L}[W{I|L}];{[QN]|[E{I|L}]|[KN]}N{I|L}SV{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}QTV[KA]{I|L}[KA];{[QN]|[E{I|L}]|[KN]}NTV[KA]{I|L}[KA];{NN|[MP]|[D{I|L}]|[EV]}QT{I|L}[KG]{I|L}[KA];{[QN]|[E{I|L}]|[KN]}NT{I|L}[KG]{I|L}[KA];{[QN]|[E{I|L}]|[KN]}GGTV{I|L}V[W{I|L}] 3.6376;3.0448;3.0096;2.7894;2.5332;2.3515;2.337;2.3163;2.3018;2.1966 -;-;-;-;-;-;-;-;-;- 4303 1 0.983 117507.0 0.949999988079071 11036 4944 15965 HBL1_DMSO_200M_050219_2,15982 HBL1_DMSO_200M_050219_2,15982,VVIGADTIVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15983 84.119 800.0 143580.0 25 0 11504.0 -1 0 100 955.5054809451104 0 955.5054809451104 PEAK CID FTMS 0 0 0 -1 0 18 4 PQ{I|L}AA{I|L}D 7 -1 25.898 0.0 0.0 1.3567 0.0 0.0 988.5332076760568 209.05805383853752 1197.5912615145942 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6203715150305281 0.0 PQ{I|L}AA{I|L}D 1.3567 - 1766 + 1 0.983 79464.7 0.8700000047683716 11037 4944 15965 HBL1_DMSO_200M_050219_2,15983 HBL1_DMSO_200M_050219_2,15983, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 15984 84.133 800.0 258400.0 25 0 20095.0 + 39904 VFPPSFREL 9 183 546.2982374339033 1090.5819219346065 2 546.2993041872978 MULTI CID FTMS 0 0 0 15965 111964.53125 0.7201331944869044 -15 1.567108154296875 19 Unmodified _VFPPSFREL_ ENSG00000101052|ENST00000373030|IFT52 22.736283301280096 0.2418982879461534 4 [{M(Oxidation (M))|F}V]PP[WP]VH{I|L} 9 4 + 31.877 0.0 0.0 2.9229 2.9229 71.661 0.0 0.0 0.0 -0.1027279550327016 2.67561010590676 -0.1027279550327016 6.6256727341422526 0 0.3494850021680094 0.7958800173440752 0.0 0.0 [{M(Oxidation (M))|F}V]PP[WP]VH{I|L};[VS]V[KT]{I|L}DVS[SG];[{I|L}T]A[KT]{I|L}DVS[SG];{[TV]|[{I|L}S]}M[R{M(Oxidation (M))|F}]{I|L}P{NN|[MP]|[D{I|L}]|[EV]};[VS]V[KT]{I|L}DW[SG];[{M(Oxidation (M))|F}V]PP[WP][H{I|L}]V;[{M(Oxidation (M))|F}V]P[NS][WK]T{I|L};[{M(Oxidation (M))|F}V]PP[KP]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L};[{I|L}T]A[KT]{I|L}DW[SG];[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E]KPP{NN|[MP]|[D{I|L}]|[EV]} 2.9229;2.3154;2.1558;2.0652;1.9884;1.9059;1.8902;1.8486;1.8289;1.751 -;-;-;-;-;-;-;-;-;- 1528 + 1 0.983 163873.8 0.8799999952316284 11038 4944 15965 HBL1_DMSO_200M_050219_2,15984 HBL1_DMSO_200M_050219_2,15984,VFPPSFREL False True VFPPSFREL 84.133083 546.299304187298 5882045.5 15965.0 ENSG00000101052|ENST00000373030|IFT52 4.754129727681478 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15985 84.147 800.0 210090.0 25 0 45224.0 + 20464 LLKSTYIFNLI 11 150 442.2666114292764 1323.7780048880293 3 442.2660705447197 MULTI CID FTMS 0 0 0 15965 96832.46875 0.6402933170200348 -1 0.1179046630859375 20 Unmodified _LLKSTYIFNLI_ REV__ENSG00000114853|ENST00000232974|ZBTB47;REV__nc|ENSG00000114853|Q9UFB7-2|ZBTB47 7.477065608646677 0.839870652676021 4 {[SA]|[TG]}AAQP{I|L} 7 -1 32.739 0.0 0.0 2.4732 0.0 0.0 0.0 682.4157972066417 682.4157972066417 1.2957075232885271 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.6989700043360187 0.0 {[SA]|[TG]}AAQP{I|L} 2.4732 - 867 1 0.983 134285.9 0.6700000166893005 11039 4944 15965 HBL1_DMSO_200M_050219_2,15985 HBL1_DMSO_200M_050219_2,15985,LLKSTYIFNLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15987 84.151 2.3 32228000.0 25 0 10362000.0 + 23273 LSWLTLLLR 9 65 557.8506980563074 1113.6868431794146 2 557.8511840701103 MULTI CID FTMS 0 0 0 15986 20822224.0 1.0 0 0.0 1 Unmodified _LSWLTLLLR_ REV__ENST00000483825.5_1_1:167404074-167487702:-|nuORF 11.494710602746466 0.5255349189887087 4 [{I|L}T]{[RE]|[WV]}T{I|L}{I|L} 7 -1 29.481 0.0 0.0 2.6471 0.0 0.0 0.0 284.17424487302713 284.17424487302713 17.698107996295587 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}T]{[RE]|[WV]}T{I|L}{I|L} 2.6471 - 29 1 0.986 61986.3 1.0 11040 4945 15986 HBL1_DMSO_200M_050219_2,15987 HBL1_DMSO_200M_050219_2,15987,LSWLTLLLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15988 84.153 35.0 1832100.0 25 0 203540.0 + 9807 FPAPILRAV 9 72 492.30552976104894 982.596506588898 2 492.3056823611259 MULTI CID FTMS 0 0 0 15986 1266017.625 0.7727661262135056 1 -0.1174087524414062 2 Unmodified _FPAPILRAV_ chr1:161707343-161710475|41|41.07|0.45|6.51|+|ENST00000540521|FCRLA,FCRLA;chr1:161707343-161711934|45|11.11|0.1|6.83|+|ENST00000674251|FCRLA,FCRLA;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161681590-161683167:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-11|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-14|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-4|FCRLA;nc|ENSG00000132185|Q7L513-5|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 39.957323273325 0.0756908302845263 4 {M(Oxidation (M))|F}K{I|L}{I|L}PAPE 8 6 57.856 0.0 0.0 5.8881 0.0 0.0 69.05864913154453 0.0 69.05864913154453 0.0 44.6682129807985 0.0 0.0 0 1.0 0.0 0.0 0.0 {M(Oxidation (M))|F}K{I|L}{I|L}PAPE 5.8881 - 120 1 0.986 57933.3 1.0 11041 4945 15986 HBL1_DMSO_200M_050219_2,15988 HBL1_DMSO_200M_050219_2,15988,FPAPILRAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15989 84.154 28.0 1446200.0 25 0 235280.0 -1 LASTECFL 8 56 470.7263908802107 939.4382288272216 2 470.7264892458916 MULTI CID FTMS 0 0 0 15986 1495883.625 0.4702168627509842 4 -0.4631118774414062 3 Carbamidomethyl (C) _LASTEC(Carbamidomethyl (C))FL_ ENSG00000196248|ENST00000641123|OR10S1;nc|ENSG00000196248|Q8NGN2|OR10S1 13.50788311687929 0.7113601687236069 4 {I|L}A 2 -1 36.454 0.0 0.0 3.8804 0.0 0.0 0.0 752.2952282214247 752.2952282214247 16.505149978319906 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}A 3.8804 + + 8 + 1 0.986 39948.0 1.0 11042 4945 15986 HBL1_DMSO_200M_050219_2,15989 HBL1_DMSO_200M_050219_2,15989,LASTECFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15990 84.155 30.0 1018900.0 25 0 164910.0 1893 ALWYLATS 8 41 462.744003502894 0 462.7438232302666 PEAK CID FTMS 0 0 0 15986 1484388.375 0.5669310634270552 4 -0.4631118774414062 4 Unmodified _ALWYLATS_ nc|ENSG00000157593|Q8TB61-4|SLC35B2 10.183394434864962 0.5394990767616434 4 P 1 8 11.237 0.0 0.0 1.2168 0.0 0.0 184.12035523745857 639.2760996549185 823.396454892377 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P 1.2168 - 2 + 1 0.986 34185.0 1.0 11043 4945 15986 HBL1_DMSO_200M_050219_2,15990 HBL1_DMSO_200M_050219_2,15990,ALWYLATS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 15991 84.156 38.0 682810.0 25 0 102380.0 + -1 ALLDFTCT 8 57 314.15352150719866 939.438735121796 3 314.1531249880791 MULTI CID FTMS 0 0 0 15986 1280935.125 0.4532034856686598 4 -0.4631118774414062 5 Carbamidomethyl (C) _ALLDFTC(Carbamidomethyl (C))T_ REV__ENST00000219478.10_1_16:4800958-4801270:-|nuORF 10.823927491677226 0.7510103885582552 4 [{I|L}A]{I|L} 3 -1 30.458 0.0 0.0 3.2421 0.0 0.0 0.0 639.2100862438127 639.2100862438127 23.46787486224656 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]{I|L} 3.2421 + + 4 + 1 0.986 29228.3 1.0 11044 4945 15986 HBL1_DMSO_200M_050219_2,15991 HBL1_DMSO_200M_050219_2,15991,ALLDFTCT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15992 84.157 54.0 1422100.0 25 0 211420.0 + 9874 FPFKPPSI 8 66 466.7659257035817 931.5172984739636 2 466.7657653689384 MULTI CID FTMS 0 0 0 15986 1082174.625 0.4795060843025758 -3 0.37603759765625 6 Unmodified _FPFKPPSI_ ENSG00000160087|ENST00000349431|UBE2J2;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2 43.85829265575387 0.1697421968005898 4 {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPPS{I|L} 8 0 + 56.235 0.0 0.0 6.0369 6.0369 78.646 0.0 0.0 0.0 42.805168975722765 12.607215860603702 12.607215860603702 3.450528104279016 0 0.805462187404089 0.0 0.3054621874040891 0.0 + + {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPPS{I|L};{M(Oxidation (M))|F}{I|L}MKPPS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[W{I|L}]{I|L}E;{M(Oxidation (M))|F}[HK][HV][HK] 6.0369;5.6665;4.8086;0.54039 +;-;-;- + 98 + 1 0.986 65981.7 1.0 11045 4945 15986 HBL1_DMSO_200M_050219_2,15992 HBL1_DMSO_200M_050219_2,15992,FPFKPPSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15993 84.159 49.0 1370100.0 25 0 103480.0 15198 IPERRMKVQ 9 73 386.2259835217569 1155.6561211654707 3 386.2257873415947 MULTI CID FTMS 0 0 0 15986 823188.9375 1.0 0 0.0 7 Unmodified _IPERRMKVQ_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 12.174745833636583 0.5071271664557081 4 {I|L}PWV 4 6 41.771 0.0 0.0 3.6145 0.0 0.0 0.0 657.350149956513 657.350149956513 22.10531903759588 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {I|L}PWV 3.6145 - 126 + 1 0.986 61729.4 1.0 11046 4945 15986 HBL1_DMSO_200M_050219_2,15993 HBL1_DMSO_200M_050219_2,15993,IPERRMKVQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15994 84.16 67.0 796830.0 25 0 61988.0 + 7724 ELDPLEQLI 9 81 535.292888021883 0 535.2926513552666 PEAK CID FTMS 0 0 0 15986 531193.375 0.3933318425238713 -2 0.2371368408203125 8 Unmodified _ELDPLEQLI_ REV__ENSG00000154114|ENST00000683345|TBCEL;REV__ENST00000533134.1_1_11:120924418-120928239:+|nuORF 11.640296217721598 0.2934555500198502 4 {I|L}{I|L}{I|L}E 4 -1 20.477 0.0 0.0 1.9163 0.0 0.0 388.1964194990408 209.05709253482652 597.2535120338674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {I|L}{I|L}{I|L}E 1.9163 - 51 + 1 0.986 49686.0 1.0 11047 4945 15986 HBL1_DMSO_200M_050219_2,15994 HBL1_DMSO_200M_050219_2,15994,ELDPLEQLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15995 84.163 144.0 460920.0 25 0 55714.0 37458 TLEEIYSWI 9 72 577.2929914552393 0 577.2930786013603 PEAK CID FTMS 0 0 0 15986 533453.4375 1.0 0 0.0 9 Unmodified _TLEEIYSWI_ ENSG00000158525|ENST00000474905|CPA5;ENST00000495736.1_1_7:129986419-130007427:+|nuORF;nc|ENSG00000158525|Q8WXQ8-2|CPA5;nc|ENSG00000158525|Q8WXQ8-3|CPA5 17.11289562659939 0.230679707888486 4 E 1 8 10.485 0.0 0.0 0.90967 0.0 0.0 938.4392105942692 82.06701074771718 1020.5062213419864 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + E 0.90967 + + 11 + 1 0.986 57683.5 1.0 11048 4945 15986 HBL1_DMSO_200M_050219_2,15995 HBL1_DMSO_200M_050219_2,15995,TLEEIYSWI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15996 84.166 149.0 469020.0 25 0 109020.0 + 14378 IFDFNLCNLV 10 74 399.8717217627847 0 399.8714782595634 PEAK CID FTMS 0 0 0 15986 397439.8125 0.5247330264005439 -1 0.119232177734375 10 Unmodified _IFDFNLCNLV_ REV__ENSG00000204764|ENST00000523189|RANBP17;REV__ENST00000443155.5_1_5:170288887-170338173:+|nuORF;REV__ENST00000519130.5_1_5:170337927-170338173:+|nuORF;REV__nc|ENSG00000204764|Q9H2T7-2|RANBP17 14.838274106304384 0.3381107837965078 4 {M(Oxidation (M))|F}{I|L}{I|L}D 4 -1 20.984 0.0 0.0 2.6304 0.0 0.0 124.34961797058313 182.0939425104125 306.44356048099564 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 {M(Oxidation (M))|F}{I|L}{I|L}D 2.6304 - 87 + 1 0.986 57804.8 1.0 11049 4945 15986 HBL1_DMSO_200M_050219_2,15996 HBL1_DMSO_200M_050219_2,15996,IFDFNLCNLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 15997 84.169 138.0 478070.0 25 0 76523.0 + 26629 NVVDNLVVV 9 108 485.7826624510157 969.5507719688314 2 485.7822448611259 MULTI CID FTMS 0 0 0 15986 336659.1875 0.8147723834126708 2 -0.20391845703125 11 Unmodified _NVVDNLVVV_ ENSG00000141452|ENST00000269221|RMC1;ENST00000589215.5_1_18:21087981-21111645:+|nuORF 39.94969957227396 0.0757326808254658 4 [{I|L}V]NDNV 6 5 31.916 0.0 0.0 3.2919 0.0 0.0 0.0 312.19375265038224 312.19375265038224 8.02301456438613 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.7302046884880937 [{I|L}V]NDNV 3.2919 - 921 1 0.986 53142.9 1.0 11050 4945 15986 HBL1_DMSO_200M_050219_2,15997 HBL1_DMSO_200M_050219_2,15997,NVVDNLVVV True True NVVDNLVVV 84.168985 485.782244861126 6377981.5 15986.0 ENSG00000141452|ENST00000269221|RMC1;;ENST00000589215.5_1_18:21087981-21111645:+|nuORF 3.428603172302246 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15998 84.181 706.0 317930.0 25 0 31773.0 11372 GGCVPDFL 8 165 404.18740568680334 806.3602584404067 2 404.1870910525322 MULTI CID FTMS 0 0 0 15986 316705.28125 0.4538008004249207 2 -0.20391845703125 12 Unmodified _GGCVPDFL_ ENSG00000123411|ENST00000547167|IKZF4;ENST00000547668.5_1_12:56415277-56418480:+|nuORF 10.183394434864962 0.7604730176254005 4 D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L} 6 6 + 39.589 0.0 0.0 4.9095 4.9095 83.583 0.0 0.0 0.0 11.868802314537092 12.791681396005998 11.868802314537092 13.694028404633151 0 0.5994850021680094 0.0 0.5 0.0 D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}ED{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[C(Carbamidomethyl (C))K]C{I|L};{[QG]|[NA]}{NN|[MP]|[D{I|L}]|[EV]}D{M(Oxidation (M))|F}{I|L} 4.9095;3.2113;2.6562;2.4274;0.097645 -;-;-;-;- 157 + 1 0.986 175629.0 1.0 11051 4945 15986 HBL1_DMSO_200M_050219_2,15998 HBL1_DMSO_200M_050219_2,15998,GGCVPDFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 15999 84.192 640.0 435780.0 25 0 36452.0 1329 AIYWERSL 8 179 519.2728425494547 1036.531132165709 2 519.2734863162041 MULTI CID FTMS 0 0 0 15986 295787.5625 1.0 0 0.0 13 Unmodified _AIYWERSL_ ENSG00000197653|ENST00000673944|DNAH10;ENST00000467219.5_1_12:124265674-124298205:+|nuORF;nc|ENSG00000197653|Q8IVF4-2|DNAH10;nc|ENSG00000197653|Q8IVF4|DNAH10 16.942295170755138 0.6606234159769251 4 [R{I|L}][WY]TDA{I|L} 8 4 [R{I|L}][WY]TD + + 24.508 -4.5392 -0.54401 2.3645 2.3645 44.946 0.0 0.0 0.0 0.0 1.8052345079578915 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 [R{I|L}][WY]TDA{I|L} 2.3645 - 1014 + 1 0.986 212278.3 1.0 11052 4945 15986 HBL1_DMSO_200M_050219_2,15999 HBL1_DMSO_200M_050219_2,15999,AIYWERSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16000 84.197 272.0 375500.0 25 0 52493.0 + 4436 DAWKELTI 8 131 488.2618126401844 974.5090723471689 2 488.2613098025322 MULTI CID FTMS 0 0 0 15986 203925.0 1.0 0 0.0 14 Unmodified _DAWKELTI_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 49.93300154707207 0.1395624531867191 4 {[SA]|[TG]}REW{I|L}T{I|L} 8 4 + 43.26 0.0 0.0 4.4391 4.4391 72.21 0.0 0.0 0.0 5.32335831349782 8.588417182053568 5.32335831349782 3.494850021680086 0 1.1989700043360187 0.0 0.5418727718234408 0.4247425010840047 {[SA]|[TG]}REW{I|L}T{I|L};{[SA]|[TG]}RE{I|L}WT{I|L};[WK]EW{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}KWWT{I|L};{[DA]|[EG]}W[KP]{M(Oxidation (M))|F}V{I|L};[WK]E{I|L}WT{I|L};{[SA]|[TG]}RE{[DA]|[EG]}{I|L}T{I|L};[QT]TRQQT{I|L};{[SA]|[TG]}RE{I|L}{[DA]|[EG]}T{I|L};[{I|L}T][VG]WWT{I|L} 4.4391;4.0805;3.8929;3.7927;3.5578;3.5343;3.4887;3.2227;3.1301;3.0812 -;-;-;-;-;-;-;-;-;- 829 1 0.986 82714.2 1.0 11053 4945 15986 HBL1_DMSO_200M_050219_2,16000 HBL1_DMSO_200M_050219_2,16000,DAWKELTI False True DAWKELTI 84.197424 488.261309802532 2083966.5 15986.0 ENST00000420783.7_1_3:49044839-49051550:+|nuORF;;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;;ENST00000489684.2_1_3:49044864-49050780:+|nuORF;;ENSG00000178252|ENST00000608424|WDR6 5.078456083933513 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16001 84.201 195.0 256190.0 25 0 37965.0 + -1 LAEMEMSL 8 82 478.2094409348333 954.4043289364666 2 478.7116882205009 MULTI CID FTMS 0 0 0 15986 204141.375 0.4523683029655031 22 -2.4864044189453125 15 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 10.183394434864962 0.7604730176254005 4 {I|L} 1 -1 13.979 0.0 0.0 1.4647 0.0 0.0 823.3093104811917 0.0 823.3093104811917 0.0 4.146518864155127 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4647 + + 28 + 1 0.986 41224.8 1.0 11054 4945 15986 HBL1_DMSO_200M_050219_2,16001 HBL1_DMSO_200M_050219_2,16001,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16002 84.215 800.0 244110.0 25 0 18570.0 + -1 DALRMLEV 8 189 473.7547175029824 0 473.7550231814384 PEAK CID FTMS 0 0 0 15986 146330.828125 1.0 0 0.0 16 Carbamidomethyl (C) _IAC(Carbamidomethyl (C))KQVEV_ ENSG00000068354|ENST00000376771|TBC1D25 28.486842064014134 0.2575685520298453 4 E{I|L}R{M(Oxidation (M))|F}P 5 -1 24.769 0.0 0.0 2.6197 0.0 0.0 117.07707045674016 183.04172693424064 300.11879739098083 0.0 0.0 0.0 0.0 0 1.035666875892183 0.0 0.0 0.0 E{I|L}R{M(Oxidation (M))|F}P 2.6197 - 1327 + 1 0.986 149635.6 0.8299999833106995 11055 4945 15986 HBL1_DMSO_200M_050219_2,16002 HBL1_DMSO_200M_050219_2,16002,IACKQVEV False False DALRMLEV 84.214963 473.755023181438 1074163.0 15986.0 ENSG00000068354|ENST00000376771|TBC1D25 4.030803283055623 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16003 84.23 800.0 592400.0 25 0 52996.0 + 20379 GVVPQLVKL 9 199 476.3211434766972 950.6277340201945 2 476.3200866580009 MULTI CID FTMS 0 0 0 15986 153244.890625 0.011206211821284 7 -0.83795166015625 17 Unmodified _LLGPRLVLA_ ENSG00000182481|ENST00000330459|KPNA2 32.30548876998284 0.1201446275138228 4 VPQ{I|L}VK{I|L} 7 6 39.656 0.0 0.0 4.1715 0.0 0.0 155.1055542768582 0.0 155.1055542768582 0.0 0.6581451127329814 0.0 0.0 0 0.0 0.0 0.0 1.201163485412895 VPQ{I|L}VK{I|L} 4.1715 - 3623 + 1 0.986 355323.8 0.8299999833106995 11056 4945 15986 HBL1_DMSO_200M_050219_2,16003 HBL1_DMSO_200M_050219_2,16003,LLGPRLVLA True True GVVPQLVKL 84.229953 476.320086658001 877774944.0 15986.0 ENSG00000182481|ENST00000330459|KPNA2 5.491032441457112 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16004 84.244 800.0 301330.0 25 0 18464.0 + 18869 LASQHEEL 8 231 309.49051870186247 925.4497267057876 3 309.4904357790947 MULTI CID FTMS 0 0 0 15986 140920.0625 0.365749211960295 34 -3.912765502929688 18 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 4 {I|L}{M(Oxidation (M))|F} 2 -1 16.454 0.0 0.0 1.7779 0.0 0.0 647.3015258470984 0.0 647.3015258470984 0.0 1.716590673155734 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.7779 - 192 1 0.986 192995.7 0.6600000262260437 11057 4945 15986 HBL1_DMSO_200M_050219_2,16004 HBL1_DMSO_200M_050219_2,16004,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16005 84.249 304.0 511550.0 25 0 57481.0 + 33614 SIQDGATKAL 10 172 502.2756460490869 1002.5367391649736 2 502.2764465212822 MULTI CID FTMS 0 0 0 15986 131819.78125 0.757500601585312 -2 0.2371368408203125 19 Unmodified _SIQDGATKAL_ REV__nc|ENSG00000183091|P20929-1|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-4|NEB 18.1463463914782 0.5430639438673815 4 VVS[WE]GQKA 9 -1 + 26.879 0.0 0.0 2.6811 2.6811 61.366 0.0 0.0 0.0 4.554042843578294 2.927032861984241 2.927032861984241 0.4575749056067515 0 -0.0123045056675454 2.0 0.6421590589602533 0.0 VVS[WE]GQKA;VVSWWQKA;VV{I|L}{[C(Carbamidomethyl (C))E]|[WC]}GQKA;VVS{I|L}[C(Carbamidomethyl (C))N]{I|L}KA;VV{I|L}S[C(Carbamidomethyl (C))N]{I|L}KA;VVC(Carbamidomethyl (C)){[QN]|[E{I|L}]|[KN]}GQKA;{[QN]|[E{I|L}]|[KN]}CEVV{I|L}KA;{[QN]|[E{I|L}]|[KN]}CE{I|L}VVKA;VVS{I|L}[HC]{M(Oxidation (M))|F}KA;VV{I|L}[WC(Carbamidomethyl (C))]QKA 2.6811;2.6355;2.6022;2.5038;2.4248;2.3019;2.2269;2.2092;1.9778;1.916 -;-;-;-;-;-;-;-;-;- 1561 1 0.986 119343.2 1.0 11058 4945 15986 HBL1_DMSO_200M_050219_2,16005 HBL1_DMSO_200M_050219_2,16005,SIQDGATKAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16006 84.264 800.0 84383.0 25 0 3830.9 + 17915 KQVEDDIQQLL 11 117 664.8569586004749 1327.6993642677496 2 664.8562499880791 MULTI CID FTMS 0 0 0 15986 109615.5625 0.2103256857054782 2 -0.20391845703125 20 Unmodified _KQVEDDIQQLL_ ENSG00000161057|ENST00000292644|PSMC2;ENST00000460021.1_1_7:102994369-103002536:+|nuORF 42.312485326615175 0.1767732348921932 4 [AG]PQ{I|L}V{[{M(Oxidation (M))|F}D]|MM}QQ{I|L}{I|L} 12 7 + 53.424 0.0 0.0 4.0238 4.0238 67.011 0.0 0.0 0.0 1.681121478262547 9.436974992327125 1.681121478262547 1.681121478262547 0 0.4604093769761876 1.3979400086720375 0.0 0.7302046884880937 [AG]PQ{I|L}V{[{M(Oxidation (M))|F}D]|MM}QQ{I|L}{I|L};[Y{I|L}]G{[TV]|[{I|L}S]}MYQQ{I|L}{I|L};[AG]QP{I|L}V{[{M(Oxidation (M))|F}D]|MM}QQ{I|L}{I|L};[AG]PQ{I|L}V{[C(Carbamidomethyl (C))E]|[WC]}TQ{I|L}{I|L};[QP]Q{I|L}V{[{M(Oxidation (M))|F}D]|MM}QQ{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKDD{I|L}QQ{I|L}{I|L};[AG]PQ{I|L}V{[{M(Oxidation (M))|F}D]|MM}Q[AG]{I|L}{I|L};[AG]PQ{I|L}V{[{M(Oxidation (M))|F}D]|MM}[AG]Q{I|L}{I|L};[AG]P[AG]{I|L}V{[{M(Oxidation (M))|F}D]|MM}QQ{I|L}{I|L};[AG]QP{I|L}V{[C(Carbamidomethyl (C))E]|[WC]}TQ{I|L}{I|L} 4.0238;3.8972;3.7809;3.4974;3.3997;3.3835;3.3385;3.3385;3.3385;3.2544 -;-;-;-;-;-;-;-;-;- 962 1 0.986 61549.1 0.7699999809265137 11059 4945 15986 HBL1_DMSO_200M_050219_2,16006 HBL1_DMSO_200M_050219_2,16006,KQVEDDIQQLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16008 84.269 10.0 5245900.0 25 0 816410.0 + 1630 ALMAAPLSL 9 64 451.75274496202985 901.4909369908596 2 451.7528869509697 MULTI CID FTMS 0 0 0 16007 6100021.5 0.4696868270171842 31 -3.5397186279296875 1 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS 6 4 47.369 0.0 0.0 5.2545 0.0 0.0 0.0 312.1920074004749 312.1920074004749 23.11629054940952 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS 5.2545 - 181 1 0.986 48619.3 1.0 11060 4946 16007 HBL1_DMSO_200M_050219_2,16008 HBL1_DMSO_200M_050219_2,16008,ALMAAPLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16009 84.27 24.0 1610300.0 25 0 251760.0 + 11691 GLFSALSELGL 11 68 553.8085383295695 1105.602523725939 2 553.8091308474541 MULTI CID FTMS 0 0 0 16007 1551612.0 0.1300702789866869 2 -0.2322769165039062 2 Unmodified _GLFSALSELGL_ REV__ENST00000342609.6_1_2:191857981-191858245:-|nuORF 22.736283301280096 0.5583477779825423 4 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}A{I|L}TK 8 -1 66.363 0.0 0.0 6.0024 0.0 0.0 0.0 259.07370935611567 259.07370935611567 40.790845200003176 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8494850021680094 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}A{I|L}TK 6.0024 - 242 + 1 0.986 36588.1 1.0 11061 4946 16007 HBL1_DMSO_200M_050219_2,16009 HBL1_DMSO_200M_050219_2,16009,GLFSALSELGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16010 84.271 43.0 1675100.0 25 0 312460.0 + 4656 DAYVLPKLY 9 74 541.3001215762505 1080.585690219301 2 541.3004638552666 MULTI CID FTMS 0 0 0 16007 1244599.75 0.0086960689205033 9 -1.1307144165039062 3 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 43.85829265575387 0.0542763391141878 4 {[DA]|[EG]}YV{I|L}PK{I|L}Y 9 0 + 63.426 0.0 0.0 5.8696 5.8696 82.66 0.0 0.0 0.0 18.450572201699025 7.269987279362624 7.269987279362624 7.269987279362624 0 0.805462187404089 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L}Y;{[DA]|[EG]}YV{I|L}PKY{I|L} 5.8696;5.1968 +;- + 112 + 1 0.986 61527.5 1.0 11062 4946 16007 HBL1_DMSO_200M_050219_2,16010 HBL1_DMSO_200M_050219_2,16010,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16011 84.273 74.0 1075000.0 25 0 155230.0 + 44566 YPFEPPQI 8 106 495.75042385863634 989.4862947840728 2 495.7505065798759 MULTI CID FTMS 0 0 0 16007 841777.4375 0.5972368099796136 -2 0.2366409301757812 4 Unmodified _YPFEPPQI_ ENSG00000077152|ENST00000646651|UBE2T;ENST00000487227.5_1_1:202302298-202304891:-|nuORF 70.71552829651908 0.111000043122623 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPPQ{I|L} 8 2 + 71.936 0.0 0.0 7.27 7.27 84.119 0.0 0.0 0.0 4.191293077419758 16.40978057358332 4.191293077419758 4.191293077419758 0 1.1237125054200234 1.0969100130080565 0.7614393726401688 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPPQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EPPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YEPPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EPYPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPP[AG]{I|L};{[QN]|[E{I|L}]|[KN]}MYPPQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EPP[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YEPP[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EPYP[AG]{I|L};{[QN]|[E{I|L}]|[KN]}MPYPQ{I|L} 7.27;6.8465;6.7879;6.456;6.334;6.2646;5.9104;5.8518;5.52;5.4506 -;+;-;-;-;-;-;-;-;- + 680 1 0.986 66077.5 1.0 11063 4946 16007 HBL1_DMSO_200M_050219_2,16011 HBL1_DMSO_200M_050219_2,16011,YPFEPPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16012 84.275 100.0 711080.0 25 0 58543.0 + 27415 PINNILISL 9 90 498.8080665076233 995.6015800820468 2 498.8084899783134 MULTI CID FTMS 0 0 0 16007 617639.3125 1.0 0 0.0 5 Unmodified _PINNILISL_ REV__ENSG00000148735|ENST00000694986|PLEKHS1;REV__nc|ENSG00000148735|Q5SXH7-1|PLEKHS1;REV__nc|ENSG00000148735|Q5SXH7-4|PLEKHS1 50.855029805455786 0.0384952370514206 4 [AG]PQ{I|L}{I|L}TVVV 10 -1 + 47.624 0.0 0.0 4.7834 4.7834 69.927 0.0 0.0 0.0 1.7033893016659007 10.012262311882765 1.7033893016659007 1.7033893016659007 0 0.2742275032520141 0.7958800173440752 0.5 0.805462187404089 [AG]PQ{I|L}{I|L}TVVV;[QP]Q{I|L}{I|L}TVVV;[AG]PQ{I|L}{I|L}VTVV;[QP]Q{I|L}{I|L}VTVV;[QP][AG]{I|L}{I|L}TVVV;[QP][AG]{I|L}{I|L}VTVV;[AG]PQ{I|L}V{I|L}TVV;[QP]Q{I|L}V{I|L}TVV;[AG]P[AG]{I|L}{I|L}TVVV;[{I|L}P]QQ{I|L}TVVV 4.7834;4.6123;4.504;4.3329;3.6874;3.408;3.2958;3.1247;3.0539;3.0486 -;-;-;-;-;-;-;-;-;- 539 1 0.986 56659.5 1.0 11064 4946 16007 HBL1_DMSO_200M_050219_2,16012 HBL1_DMSO_200M_050219_2,16012,PINNILISL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16013 84.278 149.0 535160.0 25 0 61743.0 + 26543 NVIKVSVYL 9 113 517.8155780284902 1033.6166031237804 2 517.8163940310478 MULTI CID FTMS 0 0 0 16007 504086.15625 0.7694957849542918 -1 0.1174087524414062 6 Unmodified _NVIKVSVYL_ ENSG00000169727|ENST00000578552|GPS1;ENST00000392357.1_1_17:80012338-80013241:+|nuORF;nc|ENSG00000169727|Q13098-6|GPS1;nc|ENSG00000169727|Q13098-7|GPS1;nc|ENSG00000169727|Q13098|GPS1 62.57269311338072 0.0246576765497938 4 [{I|L}A][KT]{I|L}NV[Y{I|L}] 9 5 + 33.706 0.0 0.0 3.261 3.261 74.019 0.0 0.0 0.0 4.72566536196155 10.735316426032432 4.72566536196155 8.538719643217622 0 0.5 1.0 1.305462187404089 0.0 [{I|L}A][KT]{I|L}NV[Y{I|L}];[K{I|L}][TA]{I|L}NV[Y{I|L}];[{I|L}A][KT]{I|L}GGV[Y{I|L}];[K{I|L}][TA]{I|L}GGV[Y{I|L}];{[TV]|[{I|L}S]}[Q{I|L}][KA]V[Y{I|L}];[K{I|L}]{[CP]|[EA]}[KA]V[Y{I|L}] 3.261;2.4349;2.3701;1.544;1.2968;0.98488 -;-;-;-;-;- 343 1 0.986 64165.6 1.0 11065 4946 16007 HBL1_DMSO_200M_050219_2,16013 HBL1_DMSO_200M_050219_2,16013,NVIKVSVYL True True NVIKVSVYL 84.27798 517.816394031048 14002313.0 16007.0 nc|ENSG00000169727|Q13098|GPS1;;ENST00000392357.1_1_17:80012338-80013241:+|nuORF;;nc|ENSG00000169727|Q13098-7|GPS1;;nc|ENSG00000169727|Q13098-6|GPS1;;ENSG00000169727|ENST00000578552|GPS1 6.421219984690349 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16014 84.281 133.0 494020.0 25 0 66606.0 + 3883 DALDHVIDI 9 88 505.7615163076997 0 505.7611572146416 PEAK CID FTMS 0 0 0 16007 372914.25 0.3416019088304017 2 -0.2322769165039062 7 Unmodified _DALDHVIDI_ ENSG00000159069|ENST00000325285|FBXW5;ENST00000459905.5_1_9:139835382-139837220:-|nuORF;ENST00000483559.5_1_9:139835382-139837095:-|nuORF 37.97399986684836 0.0716774499419844 4 D{I|L}V{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}D 7 6 26.687 0.0 0.0 2.6436 0.0 0.0 131.09418632458056 82.06701074771718 213.1611970722977 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 D{I|L}V{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}D 2.6436 - 476 + 1 0.986 56791.4 1.0 11066 4946 16007 HBL1_DMSO_200M_050219_2,16014 HBL1_DMSO_200M_050219_2,16014,DALDHVIDI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16015 84.286 274.0 420760.0 25 0 45241.0 -1 0 81 787.3619958379948 2359.064158114184 3 787.6973144412041 MULTI CID FTMS 0 0 0 16007 312449.15625 0.8940675048542353 -1 0.1174087524414062 8 4 [YQ]{I|L}E[HA]{I|L}{I|L}{I|L}N 10 -1 50.45 0.0 0.0 2.1386 0.0 0.0 0.0 1161.4051507150562 1161.4051507150562 18.469968281959765 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.3807196863200844 [YQ]{I|L}E[HA]{I|L}{I|L}{I|L}N 2.1386 - 1664 1 0.986 92343.3 1.0 11067 4946 16007 HBL1_DMSO_200M_050219_2,16015 HBL1_DMSO_200M_050219_2,16015, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16016 84.288 127.0 595220.0 25 0 78758.0 + -1 KLYAGAILEV 10 107 538.8222073566983 0 538.8233520388603 PEAK CID FTMS 0 0 0 16007 222914.3125 0.8800533614065096 -1 0.1174087524414062 9 Oxidation (M) _KVM(Oxidation (M))KTLLEV_ ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000401030.4_1_1:87346375-87352853:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;ENSG00000183291|ENST00000331835|SELENOF 19.361941925380144 0.2068558026293938 4 E{I|L}{I|L}KY 5 -1 29.341 0.0 0.0 2.7278 0.0 0.0 117.075004457734 309.15671716861567 426.23172162634967 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 E{I|L}{I|L}KY 2.7278 - 211 + 1 0.986 66129.1 1.0 11068 4946 16007 HBL1_DMSO_200M_050219_2,16016 HBL1_DMSO_200M_050219_2,16016,KVMKTLLEV False False KLYAGAILEV 84.288369 538.82335203886 3240125.0 16007.0 ENST00000331835.9_2_1:87346375-87379803:-|nuORF;;ENST00000401030.4_1_1:87346375-87352853:-|nuORF;;nc|ENSG00000183291|O60613-2|SELENOF;;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;;ENSG00000183291|ENST00000331835|SELENOF 4.858076572418213 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16017 84.302 800.0 179290.0 25 0 29995.0 + -1 YYHQDKCDCYH 11 122 794.8011294852935 1587.5877060373869 2 794.8021728396416 MULTI CID FTMS 0 0 0 16007 178103.71875 1.0 0 0.0 10 2 Carbamidomethyl (C) _YYHQDKC(Carbamidomethyl (C))DC(Carbamidomethyl (C))YH_ REV__ENSG00000138686|ENST00000264499|BBS7;REV__ENST00000505692.1_1_4:122780107-122782831:-|nuORF;REV__nc|ENSG00000138686|Q8IWZ6-2|BBS7 9.38312468134398 0.8308777417566128 4 YYYD[DG]{I|L}GN[WC(Carbamidomethyl (C))]Y 12 -1 + 85.28 0.0 0.0 5.3717 5.3717 88.145 0.0 0.0 0.0 55.42912628169744 9.436974992327125 9.436974992327125 46.83704591683443 0 1.5189301784845295 2.0 0.8807196863200843 1.524227503252014 YYYD[DG]{I|L}GN[WC(Carbamidomethyl (C))]Y;YYD[HC]{I|L}D[NG]YYY;YYD{[CP]|[EA]}[{M(Oxidation (M))|F}E]YYYY;YYD[{M(Oxidation (M))|F}E]{[CP]|[EA]}YYYY;[NP]DD{[CP]|[EA]}[{M(Oxidation (M))|F}E]YYYY;[NG]{[C(Carbamidomethyl (C))E]|[WC]}G{I|L}GDDYYYY;{[YD]|[{M(Oxidation (M))|F}M]}GD{[QC]|[C(Carbamidomethyl (C))A]}[HV]YYYY;{NN|[MP]|[D{I|L}]|[EV]}GSEEGDDYYYY;{NN|[MP]|[D{I|L}]|[EV]}GD{[ET]|[MV]}GDDYYYY;[NG]{M(Oxidation (M))|F}Y{[{M(Oxidation (M))|F}C]|[YS]}WYYYY 5.3717;2.4215;1.9584;1.6157;1.4276;1.3877;1.3771;1.3458;1.3458;1.2009 -;-;-;-;-;-;-;-;-;- 2352 + 1 0.986 102541.1 0.8500000238418579 11069 4946 16007 HBL1_DMSO_200M_050219_2,16017 HBL1_DMSO_200M_050219_2,16017,YYHQDKCDCYH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16018 84.316 800.0 290120.0 25 0 16237.0 + 20964 LNLAECLYV 9 133 1037.53313389324 1036.5258574266402 1 1037.521655261517 MULTI CID FTMS 0 0 0 16007 159833.78125 0.0168863896309899 10 -1.2551651000976562 11 Unmodified _LNLAECLYV_ REV__ENSG00000109814|ENST00000316423|UGDH;REV__nc|ENSG00000109814|O60701-2|UGDH;REV__nc|ENSG00000109814|O60701-3|UGDH 34.40172386719151 0.1061884637610825 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[DG]M{I|L}YV 9 -1 + 58.581 0.0 0.0 5.6516 5.6516 70.947 0.0 0.0 0.0 31.3524843777856 31.62559374799005 31.3524843777856 0.2815125038364385 0 0.6747425010840047 1.6989700043360187 1.1307196863200843 0.7215141619232908 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[DG]M{I|L}YV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NS{[QS]|[NT]}YV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[DG]{I|L}MYV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GGS{[QS]|[NT]}YV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N[HV][DG]GV;{[QV]|[N{I|L}]|[RA]|[KV]}[NS]{[QS]|[NT]}{I|L}YV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NM{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KA];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N[HV][DN]V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[DG]{I|L}YMV;{[QV]|[N{I|L}]|[RA]|[KV]}AKD{[QS]|[NT]}YV 5.6516;5.6245;4.9501;4.7361;4.6529;4.1602;4.1003;3.9459;3.421;3.4163 -;-;-;-;-;-;-;-;-;- 2471 1 0.986 148022.4 0.8199999928474426 11070 4946 16007 HBL1_DMSO_200M_050219_2,16018 HBL1_DMSO_200M_050219_2,16018,LNLAECLYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16019 84.323 392.0 242060.0 25 0 23335.0 + -1 KVLPNDPVFL 10 118 571.7938983833368 0 571.8012573122978 PEAK CID FTMS 0 0 0 16007 141127.859375 0.9239282439816736 -4 0.4934463500976562 12 Oxidation (M) _SISAAYAM(Oxidation (M))LSL_ ENST00000510020.5_1_5:86704942-86708611:-|nuORF;ENSG00000134480|ENST00000256897|CCNH;ENST00000505230.1_1_5:86705105-86708611:-|nuORF 18.1463463914782 0.3750318954284983 4 {I|L}{I|L}S{I|L}{I|L}ED 7 -1 39.487 0.0 0.0 3.459 0.0 0.0 132.019851354761 223.07308374576408 355.0929351005251 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4802046884880935 0.0 {I|L}{I|L}S{I|L}{I|L}ED 3.459 - 415 + 1 0.986 77516.0 1.0 11071 4946 16007 HBL1_DMSO_200M_050219_2,16019 HBL1_DMSO_200M_050219_2,16019,SISAAYAMLSL False False KVLPNDPVFL 84.323117 571.801257312298 385052.875 16007.0 ENST00000510020.5_1_5:86704942-86708611:-|nuORF;;ENSG00000134480|ENST00000256897|CCNH;;ENST00000505230.1_1_5:86705105-86708611:-|nuORF 2.26447069644928 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16020 84.337 800.0 297760.0 25 0 35705.0 + -1 FSKNMARKVE 10 140 613.3215575442888 1224.6285621553775 2 613.3208495974541 MULTI CID FTMS 0 0 0 16007 129722.9453125 0.5300747348004134 -2 0.2366409301757812 13 Oxidation (M) _FSKNM(Oxidation (M))ARKVE_ REV__ENSG00000165416|ENST00000310528|SUGT1;REV__nc|ENSG00000165416|Q9Y2Z0|SUGT1 10.073929032068715 0.6785112666868882 4 {[DA]|[EG]}YV 4 -1 35.06 0.0 0.0 2.8629 0.0 0.0 0.0 773.4085836644061 773.4085836644061 0.7463884413403079 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.2396518287104437 0.0 {[DA]|[EG]}YV 2.8629 - 968 1 0.986 172116.6 0.7799999713897705 11072 4946 16007 HBL1_DMSO_200M_050219_2,16020 HBL1_DMSO_200M_050219_2,16020,FSKNMARKVE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16021 84.351 800.0 126850.0 25 0 39359.0 28161 PPRRRVTIMSL 11 123 663.3980162285911 1324.7814795239822 2 663.3978759646416 MULTI CID FTMS 0 0 0 16007 106650.8203125 0.5501147756133133 -2 0.2366409301757812 14 Unmodified _PPRRRVTIMSL_ nc|ENSG00000112081|P84103-2|SRSF3 5.731851221503515 0.8481046878870278 4 {I|L} 1 10 10.713 0.0 0.0 0.80869 0.0 0.0 1193.68641529234 0.0 1193.68641529234 0.0 0.7133375178436552 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.80869 + + 98 + 1 0.986 94025.1 0.7599999904632568 11073 4946 16007 HBL1_DMSO_200M_050219_2,16021 HBL1_DMSO_200M_050219_2,16021,PPRRRVTIMSL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 16023 84.355 12.0 5208500.0 25 0 673510.0 + 9854 FPFGKIGTV 9 67 483.2765192074866 964.5384854817733 2 483.2766906619072 MULTI CID FTMS 0 0 0 16022 4591211.0 0.6370514932072702 4 -0.579864501953125 1 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 41.8396318013385 0.0653578398400075 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E 8 4 + 36.872 0.0 0.0 3.8228 3.8228 75.686 0.0 0.0 0.0 0.6863623584101219 -0.2410497646861458 -0.2410497646861458 8.789850105233295 0 0.5 2.0 0.4247425010840047 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;[KG]{M(Oxidation (M))|F}{I|L}{[SA]|[TG]}VP{M(Oxidation (M))|F};[KG]{M(Oxidation (M))|F}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;[KG]{M(Oxidation (M))|F}P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E;{M(Oxidation (M))|F}[{I|L}T]{[SA]|[TG]}{I|L}[WK];{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{[QV]|[N{I|L}]|[RA]|[KV]}TV;[YV]V{[SA]|[TG]}{I|L}[WK];[YV]V{[SA]|[TG]}{[QV]|[N{I|L}]|[RA]|[KV]}TV 3.8228;2.9115;2.5519;2.2398;2.1671;1.956;1.4147;0.55542 -;-;-;-;-;-;-;- 153 1 0.991 55643.5 1.0 11074 4947 16022 HBL1_DMSO_200M_050219_2,16023 HBL1_DMSO_200M_050219_2,16023,FPFGKIGTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16024 84.356 14.0 2289800.0 25 0 312260.0 + 42791 VVISSDGQFAL 11 55 568.3034049009416 1134.592256868683 2 568.3034545779228 MULTI CID FTMS 0 0 0 16022 3420132.75 0.9032527125745526 1 -0.1457672119140625 2 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 27.628801355627647 0.4434699450731472 4 VV{I|L}S 4 7 33.188 0.0 0.0 2.9251 0.0 0.0 0.0 733.3177567068268 733.3177567068268 13.834172022634371 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + VV{I|L}S 2.9251 + + 29 1 0.991 30585.2 1.0 11075 4947 16022 HBL1_DMSO_200M_050219_2,16024 HBL1_DMSO_200M_050219_2,16024,VVISSDGQFAL False True VVISSDGQFAL 84.356427 568.303454577923 121122204.0 16022.0 ENST00000514183.5_1_5:180665952-180670713:-|nuORF;;ENSG00000204628|ENST00000512805|RACK1;;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;;ENST00000505461.5_1_5:180668319-180670896:-|nuORF 5.113103628158569 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16025 84.358 31.0 2040800.0 25 0 241790.0 + 34498 SMQDTLESL 9 83 512.236483035692 1022.458413138184 2 512.2375976443291 MULTI CID FTMS 0 0 0 16022 1915647.75 0.7325726268418307 1 -0.1457672119140625 3 Unmodified _SMQDTLESL_ REV__ENSG00000173610|ENST00000286604|UGT2A1;REV__nc|ENSG00000173610|P0DTE4-1|UGT2A1;REV__nc|ENSG00000173610|P0DTE4-4|UGT2A1 21.74664581756881 0.2544899275067181 4 {[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}{I|L} 5 -1 38.914 0.0 0.0 3.806 0.0 0.0 0.0 447.1343524294528 447.1343524294528 19.15662120535235 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.3252574989159953 0.0 {[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}{I|L} 3.806 - 300 1 0.991 54978.9 1.0 11076 4947 16022 HBL1_DMSO_200M_050219_2,16025 HBL1_DMSO_200M_050219_2,16025,SMQDTLESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16026 84.359 22.0 2597900.0 25 0 212530.0 + 18622 LAFEEEFGRV 10 62 598.8014857283349 1195.5884185234695 2 598.8013793826103 MULTI CID FTMS 0 0 0 16022 1864492.875 1.0 0 0.0 4 Unmodified _LAFEEEFGRV_ ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32689659-32696621:+|nuORF 40.23920728925047 0.1550410903091231 4 {I|L}A{M(Oxidation (M))|F}EEE{M(Oxidation (M))|F} 7 3 87.026 0.0 0.0 7.279 0.0 0.0 0.0 327.1786287897094 327.1786287897094 76.56881689349298 0.0 0.0 0.0 0 0.805462187404089 2.0 0.8494850021680094 0.0 + {I|L}A{M(Oxidation (M))|F}EEE{M(Oxidation (M))|F} 7.279 + + 229 + 1 0.991 50272.8 1.0 11077 4947 16022 HBL1_DMSO_200M_050219_2,16026 HBL1_DMSO_200M_050219_2,16026,LAFEEEFGRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16027 84.36 33.0 1560000.0 25 0 104420.0 + 15471 IPRSFMMEV 9 72 555.2777093820896 1108.540865830979 2 555.2783080935478 MULTI CID FTMS 0 0 0 16022 1373876.25 1.0 0 0.0 5 Unmodified _IPRSFMMEV_ ENSG00000122257|ENST00000319715|RBBP6;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;nc|ENSG00000122257|Q7Z6E9-4|RBBP6 19.361941925380144 0.3125782356748823 4 {I|L}MEV 4 5 38.8 0.0 0.0 3.5001 0.0 0.0 618.296113739702 0.0 618.296113739702 0.0 21.32576888900239 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.0 {I|L}MEV 3.5001 - 97 1 0.991 49905.3 1.0 11078 4947 16022 HBL1_DMSO_200M_050219_2,16027 HBL1_DMSO_200M_050219_2,16027,IPRSFMMEV False True IPRSFMMEV 84.359965 555.278308093548 10749544.0 16022.0 nc|ENSG00000122257|Q7Z6E9-2|RBBP6;;nc|ENSG00000122257|Q7Z6E9-4|RBBP6;;ENSG00000122257|ENST00000319715|RBBP6 3.7425365845362335 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16028 84.362 67.0 1129900.0 25 0 237710.0 19532 LFPLPAAFYH 10 61 588.3142142641116 1174.613875595023 2 588.3146240115166 MULTI CID FTMS 0 0 0 16022 803979.3125 0.6721928043211237 4 -0.579864501953125 6 Unmodified _LFPLPAAFYH_ ENSG00000169599|ENST00000410022|NFU1;nc|ENSG00000169599|Q9UMS0-3|NFU1 12.531546534597751 0.6372748319968624 4 DPP{[QN]|[E{I|L}]|[KN]} 5 8 26.466 0.0 0.0 2.2532 0.0 0.0 605.3296898581658 0.0 605.3296898581658 0.0 19.47621246364342 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 DPP{[QN]|[E{I|L}]|[KN]} 2.2532 - 25 1 0.991 66531.1 1.0 11079 4947 16022 HBL1_DMSO_200M_050219_2,16028 HBL1_DMSO_200M_050219_2,16028,LFPLPAAFYH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16029 84.363 55.0 1092500.0 25 0 122190.0 + 10784 FYPPPRITL 9 58 552.3159507051236 1102.617348477047 2 552.3165771365166 MULTI CID FTMS 0 0 0 16022 724561.625 1.0 0 0.0 7 Unmodified _FYPPPRITL_ ENSG00000102221|ENST00000614628|JADE3 24.020572477871973 0.2255576514309169 4 PP[YE] 4 7 20.445 0.0 0.0 1.8543 0.0 0.0 598.3811967389562 0.0 598.3811967389562 0.0 8.226825097560422 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PP[YE] 1.8543 - 11 1 0.991 52890.9 1.0 11080 4947 16022 HBL1_DMSO_200M_050219_2,16029 HBL1_DMSO_200M_050219_2,16029,FYPPPRITL False True FYPPPRITL 84.362992 552.316577136517 21164140.0 16022.0 ENSG00000102221|ENST00000614628|JADE3 6.74564266204834 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16030 84.366 179.0 524900.0 25 0 107180.0 + 33873 SLFGGSVKL 9 101 454.26580491548486 906.5170568977696 2 454.2657958865166 MULTI CID FTMS 0 0 0 16022 369455.65625 1.0 0 0.0 8 Unmodified _SLFGGSVKL_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000477798.5_1_3:33840175-33866683:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 45.69961567697781 0.0497987121815769 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}GGSVK{I|L} 9 0 + 66.903 0.0 0.0 7.3802 7.3802 87.187 0.0 0.0 0.0 35.59395845395106 12.252684618815096 12.252684618815096 6.47817481888638 0 0.4247425010840047 2.0 0.7614393726401688 0.2302046884880938 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}GGSVK{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}NSVK{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}GGS[K{I|L}]V;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}NS[K{I|L}]V;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SVK{I|L}S{I|L};{[CT]|[{M(Oxidation (M))|F}G]}GSVK{I|L}S{I|L} 7.3802;6.6656;4.6328;3.9181;1.7806;1.7242 +;-;-;-;-;- + 290 + 1 0.991 75819.8 1.0 11081 4947 16022 HBL1_DMSO_200M_050219_2,16030 HBL1_DMSO_200M_050219_2,16030,SLFGGSVKL True True SLFGGSVKL 84.366454 454.265795886517 2816211.75 16022.0 ENST00000477798.5_1_3:33840175-33866683:+|nuORF;;ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 5.44762674967448 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16031 84.378 676.0 289950.0 25 0 35303.0 + + 14326 QLEEEGITFV 10 197 581.2920041780851 1160.56945542297 2 582.7930786013603 MULTI CID FTMS 0 0 0 16022 270242.1875 0.0359588732365505 12 -1.4925384521484375 9 Unmodified _IEQEERTLGS_ nc|ENSG00000129657|Q92503-2|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 34.40172386719151 0.2166836008404837 4 [Q{I|L}]EEEG{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]} 10 -1 + 53.599 0.0 0.0 4.6183 4.6183 75.546 0.0 0.0 0.0 6.678974713339841 3.379231027444405 3.379231027444405 5.537275116073339 0 0.0 0.8538719643217619 2.146591250700361 1.551203852579394 [Q{I|L}]EEEG{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]EEW{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}QEEG{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}QEW{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}[AG]EEG{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};EEE{I|L}QG{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}[AG]EW{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};{[VA]|[{I|L}G]}AEEEG{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};EE[Q{I|L}]EG{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};[{M(Oxidation (M))|F}T][HN]EG{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]} 4.6183;4.1412;4.0428;3.5657;3.2532;2.9552;2.7723;2.418;2.4041;2.3278 -;-;-;-;-;-;-;-;-;- 5136 1 0.991 148784.2 1.0 11082 4947 16022 HBL1_DMSO_200M_050219_2,16031 HBL1_DMSO_200M_050219_2,16031,IEQEERTLGS False False QLEEEGITFV 84.378223 582.79307860136 2393376.75 16022.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 5.342264016469319 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16032 84.383 258.0 553310.0 25 0 61559.0 + 44454 YMSDSFINV 9 179 538.2426061042006 1074.4706592752011 2 538.2418701052666 MULTI CID FTMS 0 0 0 16022 252738.171875 1.0 0 0.0 10 Unmodified _YMSDSFINV_ ENSG00000152133|ENST00000674370|GPATCH11;nc|ENSG00000152133|Q8N954|GPATCH11 28.486842064014134 0.1687311288560894 4 E{I|L}{I|L}K{I|L}MNV 8 7 45.114 0.0 0.0 4.1987 0.0 0.0 115.91964716758235 0.0 115.91964716758235 0.0 32.95220301277904 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 E{I|L}{I|L}K{I|L}MNV 4.1987 - 1543 + 1 0.991 117885.6 1.0 11083 4947 16022 HBL1_DMSO_200M_050219_2,16032 HBL1_DMSO_200M_050219_2,16032,YMSDSFINV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16033 84.39 362.0 228220.0 25 0 42326.0 10050 FPPSPRRRRR 10 102 442.2666114292764 1323.7780048880293 3 442.6010925173759 MULTI CID FTMS 0 0 0 16022 226848.328125 0.9923464144570976 -1 0.0865097045898437 11 Unmodified _FPPSPRRRRR_ ENST00000337537.7_1_14:64009813-64009936:-|nuORF 3.072263186857199 0.7124254767349502 4 [{I|L}A]EEGS{I|L}A 8 10 30.826 0.0 0.0 2.3286 0.0 0.0 0.0 550.359217616798 550.359217616798 18.607150328368576 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.8252574989159953 0.0 [{I|L}A]EEGS{I|L}A 2.3286 - 416 1 0.991 83450.6 1.0 11084 4947 16022 HBL1_DMSO_200M_050219_2,16033 HBL1_DMSO_200M_050219_2,16033,FPPSPRRRRR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16034 84.392 135.0 438350.0 25 0 46787.0 + 22553 LPWPFRNKV 9 72 578.8354587193315 1155.656364505463 2 578.8384887576103 MULTI CID FTMS 0 0 0 16022 229231.484375 0.9776452865454428 4 -0.579864501953125 12 Unmodified _LPWPFRNKV_ ENSG00000056558|ENST00000373887|TRAF1;nc|ENSG00000056558|Q13077-2|TRAF1 21.53697664764585 0.2571576504437394 4 {I|L}PW 3 6 46.414 0.0 0.0 4.0163 0.0 0.0 0.0 756.4174821387153 756.4174821387153 18.96713777483761 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 + {I|L}PW 4.0163 + + 75 + 1 0.991 53158.3 1.0 11085 4947 16022 HBL1_DMSO_200M_050219_2,16034 HBL1_DMSO_200M_050219_2,16034,LPWPFRNKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16035 84.398 329.0 241200.0 25 0 29702.0 -1 0 95 920.9254137112556 1839.8362744893109 2 920.9265624880792 MULTI CID FTMS 0 0 0 16022 211141.375 0.7320265715004807 -1 0.0865097045898437 13 4 {[DA]|[EG]}KG{M(Oxidation (M))|F}P 6 -1 33.99 0.0 0.0 1.8474 0.0 0.0 0.0 1221.512518956361 1221.512518956361 8.499934467764874 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DA]|[EG]}KG{M(Oxidation (M))|F}P 1.8474 - 708 1 0.991 55654.1 1.0 11086 4947 16022 HBL1_DMSO_200M_050219_2,16035 HBL1_DMSO_200M_050219_2,16035, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16036 84.412 770.0 312480.0 25 0 27872.0 + -1 VLLPDERTISL 11 154 628.3781613976579 1254.7417698621157 2 628.3666869997978 MULTI CID FTMS 0 0 0 16022 199523.5625 0.0548980736078343 13 -1.6253814697265625 14 Carbamidomethyl (C) _LVLC(Carbamidomethyl (C))VSQVKPL_ ENSG00000101138|ENST00000217109|CSTF1 22.736283301280096 0.5583477779825423 4 [{I|L}V]DVKYDP{I|L}{I|L} 10 -1 68.492 0.0 0.0 5.4586 0.0 0.0 0.0 96.07457423196448 96.07457423196448 19.369670466416306 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 1.0114393726401687 0.2614393726401688 [{I|L}V]DVKYDP{I|L}{I|L} 5.4586 - 9229 1 0.991 185096.5 1.0 11087 4947 16022 HBL1_DMSO_200M_050219_2,16036 HBL1_DMSO_200M_050219_2,16036,LVLCVSQVKPL False False VLLPDERTISL 84.411619 628.366686999798 1580442.75 16022.0 ENSG00000101138|ENST00000217109|CSTF1 4.788242022196452 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16037 84.426 776.0 280830.0 25 0 17448.0 + 10598 FVLDHEDGLNL 11 173 636.3169612218443 1270.6193695104885 2 636.3170043826103 MULTI CID FTMS 0 0 0 16022 197521.703125 0.6161693838992939 -1 0.0865097045898437 15 Unmodified _FVLDHEDGLNL_ ENSG00000137497|ENST00000393695|NUMA1;ENST00000534987.5_1_11:71728600-71747007:-|nuORF;nc|ENSG00000137497|Q14980-2|NUMA1;nc|ENSG00000137497|Q14980-3|NUMA1;nc|ENSG00000137497|Q14980-4|NUMA1;nc|ENSG00000137497|Q14980-5|NUMA1 93.16586880292088 0.000550602871346 4 {NN|[MP]|[D{I|L}]|[EV]}HEGD{I|L}{M(Oxidation (M))|F}VN{I|L} 11 6 + 80.315 0.0 0.0 6.3209 6.3209 74.677 0.0 0.0 0.0 12.670304092308951 47.44708268213277 12.670304092308951 0.7918124604762511 0 1.174742501084005 0.8239087409443188 0.841129063296272 0.6747425010840047 {NN|[MP]|[D{I|L}]|[EV]}HEGD{I|L}{M(Oxidation (M))|F}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEGD{I|L}V{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEGDV{M(Oxidation (M))|F}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEGD{M(Oxidation (M))|F}V{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEDG{I|L}{M(Oxidation (M))|F}VN{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEDG{I|L}V{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEDGV{M(Oxidation (M))|F}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEDG{M(Oxidation (M))|F}V{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}HV{M(Oxidation (M))|F}EGD{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEG[{M(Oxidation (M))|F}V]D{I|L}N{I|L} 6.3209;6.2586;6.2385;6.2024;6.084;6.0217;6.0015;5.9655;5.9212;5.7687 -;-;-;-;-;-;-;-;-;- 30970 1 0.991 171561.8 1.0 11088 4947 16022 HBL1_DMSO_200M_050219_2,16037 HBL1_DMSO_200M_050219_2,16037,FVLDHEDGLNL True True FVLDHEDGLNL 84.426231 636.31700438261 2795592.0 16022.0 nc|ENSG00000137497|Q14980-5|NUMA1;;nc|ENSG00000137497|Q14980-3|NUMA1;;nc|ENSG00000137497|Q14980-4|NUMA1;;nc|ENSG00000137497|Q14980-2|NUMA1;;ENSG00000137497|ENST00000393695|NUMA1;;ENST00000534987.5_1_11:71728600-71747007:-|nuORF 6.46127971013387 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16038 84.44 800.0 132140.0 25 0 16269.0 + 3728 DAFRQPSLFY 10 135 622.3089899410054 1242.6034269488107 2 622.3098632693291 MULTI CID FTMS 0 0 0 16022 140253.703125 0.1181475941436141 4 -0.579864501953125 16 Unmodified _DAFRQPSLFY_ ENSG00000197442|ENST00000359015|MAP3K5 59.36838082759317 0.0382430275470746 4 {[TV]|[{I|L}S]}MASQ[PS]{I|L}{M(Oxidation (M))|F}Y 11 5 + 61.415 0.0 0.0 4.9424 4.9424 73.952 0.0 0.0 0.0 3.407037193034647 15.544610124651456 3.407037193034647 3.407037193034647 0 1.305462187404089 0.7695510786217261 1.1230360320760422 0.3807196863200844 {[TV]|[{I|L}S]}MASQ[PS]{I|L}{M(Oxidation (M))|F}Y;[PS][HA]PQ[PS]{I|L}{M(Oxidation (M))|F}Y;[VG][W{M(Oxidation (M))|F}]Q[PS]{I|L}{M(Oxidation (M))|F}Y;[{I|L}A]{M(Oxidation (M))|F}ASQ[PS]{I|L}{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}MAS[AG][PS]{I|L}{M(Oxidation (M))|F}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[SA]|[TG]}PQ[PS]{I|L}{M(Oxidation (M))|F}Y;[{I|L}T][C(Carbamidomethyl (C))K]D[PS]{I|L}{M(Oxidation (M))|F}Y;{[VA]|[{I|L}G]}[MT]SQ[PS]{I|L}{M(Oxidation (M))|F}Y;[VS]{[ES]|[DT]|[{I|L}C]}SQ[PS]{I|L}{M(Oxidation (M))|F}Y;[{I|L}A]{M(Oxidation (M))|F}AS[AG][PS]{I|L}{M(Oxidation (M))|F}Y 4.9424;4.6682;4.5437;4.4222;3.9014;3.6958;3.6753;3.635;3.4009;3.3811 -;-;-;-;-;-;-;-;-;- 1251 1 0.991 82122.4 0.8899999856948853 11089 4947 16022 HBL1_DMSO_200M_050219_2,16038 HBL1_DMSO_200M_050219_2,16038,DAFRQPSLFY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16039 84.454 800.0 100310.0 25 0 6028.9 + 28049 PPCCPAVL 8 83 799.387221897937 798.379945431337 1 799.3896972537041 MULTI CID FTMS 0 0 0 16022 113289.3984375 0.5272180942196766 2 -0.2591934204101562 17 Unmodified _PPCCPAVL_ REV__ENSG00000179044|ENST00000314586|EXOC3L1 2.889219685676258 0.8067950007271085 4 [{M(Oxidation (M))|F}E]{I|L}EYV 6 -1 + 59.35 0.0 0.0 7.4338 7.4338 79.378 0.0 0.0 0.0 1.2994845925341494 14.69273760456403 1.2994845925341494 1.2994845925341494 0 0.930884548956689 0.0 1.4634679910804405 0.0 [{M(Oxidation (M))|F}E]{I|L}EYV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}EYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EEYV;[{M(Oxidation (M))|F}E]{I|L}YEV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}YEV;[{M(Oxidation (M))|F}E]{I|L}YD{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}YD{I|L};{[QN]|[E{I|L}]|[KN]}Y{M(Oxidation (M))|F}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EYEV;[{M(Oxidation (M))|F}E]Y{I|L}EV 7.4338;7.271;5.5494;5.4502;5.2875;4.1673;4.0046;3.7962;3.5659;3.4254 -;-;-;-;-;-;-;-;-;- 449 1 0.991 62400.2 0.7699999809265137 11090 4947 16022 HBL1_DMSO_200M_050219_2,16039 HBL1_DMSO_200M_050219_2,16039,PPCCPAVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16040 84.469 800.0 204830.0 25 0 14852.0 + 23591 AFHPFIAGPY 10 205 560.3052599974462 0 560.3026000857353 PEAK CID FTMS 0 0 0 16022 100516.3046875 0.4983018116126697 -7 0.7959747314453125 18 Unmodified _LTPANTLYQV_ ENSG00000115677|ENST00000310931|HDLBP;nc|ENSG00000115677|Q00341-2|HDLBP 15.847184025352805 0.3304572136216667 4 T{I|L}V 3 7 18.06 0.0 0.0 1.6145 0.0 0.0 334.18234509079235 468.1931856744751 802.3755307652674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T{I|L}V 1.6145 - 895 + 1 0.991 129986.6 0.7599999904632568 11091 4947 16022 HBL1_DMSO_200M_050219_2,16040 HBL1_DMSO_200M_050219_2,16040,LTPANTLYQV False False AFHPFIAGPY 84.468922 560.302600085735 477232.28125 16022.0 ENSG00000115677|ENST00000310931|HDLBP;;nc|ENSG00000115677|Q00341-2|HDLBP 1.4784879287083943 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16041 84.483 800.0 115170.0 25 0 17635.0 + 39736 VEKKQRNTKLV 11 127 671.9128271938622 0 671.9138671755791 PEAK CID FTMS 0 0 0 16022 80868.21875 1.0 0 0.0 19 Unmodified _VEKKQRNTKLV_ REV__ENST00000606851.5_1_6:22020665-22056887:+|nuORF 7.0370850670814 0.4761840153648598 4 {I|L}{I|L}VGD 5 -1 24.575 0.0 0.0 1.8314 0.0 0.0 688.4243959875306 153.06736169986564 841.4917576873962 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 {I|L}{I|L}VGD 1.8314 - 92 + 1 0.991 79579.1 0.6700000166893005 11092 4947 16022 HBL1_DMSO_200M_050219_2,16041 HBL1_DMSO_200M_050219_2,16041,VEKKQRNTKLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16042 84.497 800.0 94178.0 25 0 8719.6 -1 0 112 701.0202697340304 2100.038979802291 3 701.3549682497978 MULTI CID FTMS 0 0 0 16022 81645.9140625 0.7473914153532143 1 -0.1457672119140625 20 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[NS]YY{I|L} 12 -1 38.188 0.0 0.0 1.8184 0.0 0.0 0.0 626.2881002459036 626.2881002459036 10.76274388132952 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[NS]YY{I|L} 1.8184 - 1583 1 0.991 64400.7 0.6600000262260437 11093 4947 16022 HBL1_DMSO_200M_050219_2,16042 HBL1_DMSO_200M_050219_2,16042, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16044 84.501 20.0 3346700.0 25 0 948580.0 23555 LTLRSQKLGV 10 62 557.8506980563074 1113.6868431794146 2 557.8512451052666 MULTI CID FTMS 0 0 0 16043 1920863.25 0.0922506284631267 3 -0.4340972900390625 1 Unmodified _LTLRSQKLGV_ ENSG00000173889|ENST00000495893|PHC3;nc|ENSG00000173889|Q8NDX5-2|PHC3;nc|ENSG00000173889|Q8NDX5-3|PHC3;nc|ENSG00000173889|Q8NDX5|PHC3 13.042465956692816 0.6287021003332052 4 [{I|L}T]{[RE]|[WV]}[{I|L}T]{I|L}R{I|L} 9 6 + 42.113 0.0 0.0 3.7814 3.7814 81.937 0.0 0.0 0.0 16.195437047215933 21.539843494254995 16.195437047215933 42.11303739409743 0 0.5 2.0 0.0 0.0 [{I|L}T]{[RE]|[WV]}[{I|L}T]{I|L}R{I|L} 3.7814 - 41 1 0.995 55798.6 1.0 11094 4948 16043 HBL1_DMSO_200M_050219_2,16044 HBL1_DMSO_200M_050219_2,16044,LTLRSQKLGV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16045 84.502 2.1 33672000.0 25 0 4450200.0 + 12867 GVVPQLVKL 9 71 476.8133558689311 951.6121588046622 2 476.8134948611259 MULTI CID FTMS 0 0 0 16043 26209678.0 0.8298523959092365 -1 0.1457672119140625 2 Unmodified _GVVPQLVKL_ ENSG00000182481|ENST00000330459|KPNA2 48.345845343767074 0.0439967357579942 4 [VG]V[QP]{I|L}VK{I|L} 9 0 + 58.566 0.0 0.0 6.1544 6.1544 57.289 0.0 0.0 0.0 24.581750760549568 12.252684618815088 12.252684618815088 0.0 0 1.1549471895720984 2.0 0.0 0.2614393726401688 + + [VG]V[QP]{I|L}VK{I|L};[VG]V{I|L}[QP]VK{I|L};[VG]V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}PK{I|L} 6.1544;6.1544;5.5693 +;-;- + 192 + 1 0.995 59998.5 1.0 11095 4948 16043 HBL1_DMSO_200M_050219_2,16045 HBL1_DMSO_200M_050219_2,16045,GVVPQLVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16046 84.503 24.0 3128400.0 25 0 481870.0 + 9875 FPFKPPSI 8 75 466.7659257035817 931.5172984739636 2 466.7660400271416 MULTI CID FTMS 0 0 0 16043 2256852.75 1.0 0 0.0 3 Unmodified _FPFKPPSI_ ENSG00000160087|ENST00000349431|UBE2J2;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2 37.97399986684836 0.2681860861828418 4 {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPPS{I|L} 8 0 + 52.428 0.0 0.0 5.6282 5.6282 81.619 0.0 0.0 0.0 38.93298474960609 11.726759565325295 11.726759565325295 7.257724967479859 0 0.4247425010840047 0.0 0.3054621874040891 0.0 + + {M(Oxidation (M))|F}P{M(Oxidation (M))|F}KPPS{I|L};{M(Oxidation (M))|F}{I|L}MKPPS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[W{I|L}]{I|L}E;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[W{I|L}]{I|L}E 5.6282;4.8491;4.504;1.6311 +;-;-;- + 123 + 1 0.995 61168.8 1.0 11096 4948 16043 HBL1_DMSO_200M_050219_2,16046 HBL1_DMSO_200M_050219_2,16046,FPFKPPSI False True FPFKPPSI 84.50338 466.766040027142 67157472.0 16043.0 nc|ENSG00000160087|Q8N2K1-2|UBE2J2;;ENSG00000160087|ENST00000349431|UBE2J2;;ENST00000464036.5_1_1:1190585-1197670:-|nuORF;;nc|ENSG00000160087|Q8N2K1-3|UBE2J2 6.073537508646647 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16047 84.505 29.0 1848100.0 25 0 214030.0 43212 WALGYLGL 8 70 446.7480171008664 891.4814812685329 2 446.7482177615166 MULTI CID FTMS 0 0 0 16043 1849727.625 0.1133081747040536 -2 0.2322769165039062 4 Unmodified _WALGYLGL_ ENSG00000089060|ENST00000680972|SLC8B1 32.45364647766026 0.3613649037604678 4 {[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L}G{I|L} 8 3 + 37.898 0.0 0.0 4.2511 4.2511 83.393 0.0 0.0 0.0 3.945247061488857 11.260682417492696 3.945247061488857 37.8976719887757 0 0.805462187404089 1.3010299956639813 0.0 0.0 {[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L}G{I|L} 4.2511 - 47 1 0.995 46997.7 1.0 11097 4948 16043 HBL1_DMSO_200M_050219_2,16047 HBL1_DMSO_200M_050219_2,16047,WALGYLGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16048 84.506 29.0 1785000.0 25 0 255670.0 + 32609 SAWRVISSI 9 83 509.7887440603811 1017.5629351875622 2 509.7879821658134 MULTI CID FTMS 0 0 0 16043 1344051.125 0.8733714054197977 -1 0.1457672119140625 5 Unmodified _SAWRVISSI_ ENSG00000134308|ENST00000238081|YWHAQ 65.47368725323818 0.0230515101691092 4 {[SA]|[TG]}WRV{I|L}SS{I|L} 9 0 + 73.739 0.0 0.0 7.2466 7.2466 84.723 0.0 0.0 0.0 4.749774129711426 13.46787486224656 4.749774129711426 4.749774129711426 0 2.017220322351953 1.5228787452803376 0.8494850021680094 0.0 + + {[SA]|[TG]}WRV{I|L}SS{I|L};{[TV]|[{I|L}S]}SP[KS]{I|L}SS{I|L};{[TV]|[{I|L}S]}S[QA]{I|L}{I|L}SS{I|L};{[TV]|[{I|L}S]}{[WN]|[YH]}V{I|L}SS{I|L};{[CA]|SS}{I|L}P[KS]{I|L}SS{I|L};{[WT]|[RM]}P[KS]{I|L}SS{I|L};{[CA]|SS}{I|L}[QA]{I|L}{I|L}SS{I|L};{[QN]|[E{I|L}]|[KN]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}SS{I|L};{[WT]|[RM]}[QA]{I|L}{I|L}SS{I|L};{[QN]|[E{I|L}]|[KN]}AA[KS]{I|L}SS{I|L} 7.2466;6.7798;6.3888;6.0596;5.7401;5.6898;5.349;5.3157;5.2988;4.8018 +;-;-;-;-;-;-;-;-;- + 375 1 0.995 44794.8 1.0 11098 4948 16043 HBL1_DMSO_200M_050219_2,16048 HBL1_DMSO_200M_050219_2,16048,SAWRVISSI True True SAWRVISSI 84.505737 509.787982165813 14877467.0 16043.0 ENSG00000134308|ENST00000238081|YWHAQ 5.4056010246276855 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16049 84.508 99.0 707790.0 25 0 124940.0 18732 LALEGGHDL 9 70 462.744003502894 0 462.7439147830009 PEAK CID FTMS 0 0 0 16043 876310.3125 0.3346883778699224 7 -0.8984375 6 Unmodified _LALEGGHDL_ ENSG00000048052|ENST00000686413|HDAC9;ENSG00000061273|ENST00000080059|HDAC7;ENSG00000068024|ENST00000543185|HDAC4;ENSG00000108840|ENST00000682912|HDAC5;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;ENST00000490851.5_1_7:18832955-19035682:+|nuORF;ENST00000494800.1_1_2:239977015-240002822:-|nuORF;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000068024|P56524-2|HDAC4;nc|ENSG00000068024|P56524|HDAC4;nc|ENSG00000108840|Q9UQL6-2|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5 16.942295170755138 0.2326366549411506 4 P{I|L} 2 8 15.217 0.0 0.0 1.6477 0.0 0.0 184.1205977278424 526.1922701471311 710.3128678749736 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L} 1.6477 - 7 + 1 0.995 62068.0 1.0 11099 4948 16043 HBL1_DMSO_200M_050219_2,16049 HBL1_DMSO_200M_050219_2,16049,LALEGGHDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16050 84.51 97.0 1562700.0 25 0 296960.0 -1 LSLMSCTI 8 80 470.7263908802107 939.4382288272216 2 470.7267944216728 MULTI CID FTMS 0 0 0 16043 701020.625 0.2203592000756303 7 -0.8984375 7 Carbamidomethyl (C),Oxidation (M) _LSLM(Oxidation (M))SC(Carbamidomethyl (C))TI_ ENST00000304056.8_1_7:32919423-32919537:-|nuORF 32.116972079565 0.368454113111938 4 {I|L}A{I|L} 3 -1 46.44 0.0 0.0 4.9434 0.0 0.0 0.0 639.2114538923856 639.2114538923856 27.460762528683706 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {I|L}A{I|L} 4.9434 - 111 + 1 0.995 119012.1 1.0 11100 4948 16043 HBL1_DMSO_200M_050219_2,16050 HBL1_DMSO_200M_050219_2,16050,LSLMSCTI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16051 84.512 74.0 700860.0 25 0 81010.0 + 39683 VEELPIGLEA 10 72 535.292888021883 0 535.2928344607353 PEAK CID FTMS 0 0 0 16043 678737.5 0.5025835863729402 1 -0.1134262084960937 8 Unmodified _VEELPIGLEA_ REV__ENSG00000067064|ENST00000381344|IDI1;REV__ENST00000435551.1_1_2:139065056-139065290:+|nuORF;REV__nc|ENSG00000067064|Q13907|IDI1 24.020572477871973 0.2658879206942018 4 G{I|L}{I|L}{I|L}E 5 -1 31.37 0.0 0.0 2.9357 0.0 0.0 331.1727378584158 209.0570009820922 540.229738840508 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 G{I|L}{I|L}{I|L}E 2.9357 - 127 + 1 0.995 48941.4 1.0 11101 4948 16043 HBL1_DMSO_200M_050219_2,16051 HBL1_DMSO_200M_050219_2,16051,VEELPIGLEA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16052 84.514 84.0 787000.0 25 0 87999.0 + 22550 LPWPFRNKV 9 75 386.2259835217569 1155.6561211654707 3 386.2256347537041 MULTI CID FTMS 0 0 0 16043 673991.8125 0.8187571307103481 3 -0.4340972900390625 9 Unmodified _LPWPFRNKV_ ENSG00000056558|ENST00000373887|TRAF1;nc|ENSG00000056558|Q13077-2|TRAF1 31.26834338654808 0.1333407332142048 4 {I|L}PWVK 5 5 60.213 0.0 0.0 5.2103 0.0 0.0 0.0 529.2549532525999 529.2549532525999 36.65619136304112 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.9247425010840048 {I|L}PWVK 5.2103 - 82 + 1 0.995 62937.5 1.0 11102 4948 16043 HBL1_DMSO_200M_050219_2,16052 HBL1_DMSO_200M_050219_2,16052,LPWPFRNKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16053 84.516 141.0 427310.0 25 0 69911.0 + -1 IASISCMIS 9 76 314.15352150719866 939.438735121796 3 314.1532775759697 MULTI CID FTMS 0 0 0 16043 619132.6875 0.2190533201799779 7 -0.8984375 10 Oxidation (M) _IASISCM(Oxidation (M))IS_ REV__ENST00000374279.3_1_9:114696773-114696854:+|nuORF 17.11289562659939 0.3734572693229295 4 [{I|L}A]{I|L}S 4 -1 39.737 0.0 0.0 4.2299 0.0 0.0 0.0 552.1785372369749 552.1785372369749 29.27948461635836 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.3807196863200844 0.0 [{I|L}A]{I|L}S 4.2299 - 18 + 1 0.995 55474.3 1.0 11103 4948 16043 HBL1_DMSO_200M_050219_2,16053 HBL1_DMSO_200M_050219_2,16053,IASISCMIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16054 84.529 733.0 347490.0 25 0 23032.0 40540 VIYCSEEQSL 10 199 585.7712567845424 1169.5279606358847 2 585.7718383669853 MULTI CID FTMS 0 0 0 16043 245345.546875 0.3893599675223299 -2 0.2322769165039062 11 Unmodified _VIYCSEEQSL_ ENST00000355135.6_2_X:13835118-13835178:-|nuORF 24.020572477871973 0.4289996903560794 4 [{I|L}V]PVYMNC[MT] 10 8 + 61.16 0.0 0.0 5.2295 5.2295 84.762 0.0 0.0 0.0 17.650312510170778 4.68256871239447 4.68256871239447 12.95880017344075 0 0.5629529932484498 2.0 0.1861818737241735 1.2856668758921828 [{I|L}V]PVYMNC[MT];[{I|L}V]{I|L}[{M(Oxidation (M))|F}V]MNC[MT];[{I|L}V]PVYMN[MT]C;[{I|L}V]PVYMGGC[MT];[{I|L}V]{M(Oxidation (M))|F}MN{I|L}{[MG]|[TS]}[MD];[{I|L}V]{I|L}[{M(Oxidation (M))|F}V]MN[MT]C;[{I|L}V]P{[CT]|[{M(Oxidation (M))|F}G]}C(Carbamidomethyl (C))HPM{I|L};[{I|L}V]PVY[CS]{[WT]|[RM]}C;[{I|L}V][WD]C(Carbamidomethyl (C))HPM{I|L};{[YC]|[HE]}W{I|L}NMPM{I|L} 5.2295;4.1214;3.9578;3.3466;2.9403;2.8498;2.6604;2.5913;2.5328;2.5221 -;-;-;-;-;-;-;-;-;- 1957 + 1 0.995 187448.4 1.0 11104 4948 16043 HBL1_DMSO_200M_050219_2,16054 HBL1_DMSO_200M_050219_2,16054,VIYCSEEQSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16055 84.534 262.0 436470.0 25 0 81779.0 + 19559 LFRHMALL 8 139 500.7904921245437 999.5664313158874 2 501.2935668826103 MULTI CID FTMS 0 0 0 16043 183064.671875 0.5950851607757185 -2 0.2322769165039062 12 Unmodified _LFRHMALL_ REV__ENSG00000148842|ENST00000369878|CNNM2;REV__nc|ENSG00000148842|Q9H8M5-2|CNNM2 11.114462752807354 0.7467182956244686 4 {[SA]|[TG]}{I|L}KWWP{I|L} 8 -1 + 22.744 0.0 0.0 2.2754 2.2754 67.425 0.0 0.0 0.0 1.4314121765364405 10.80198135264581 1.4314121765364405 3.9794000867203714 0 0.1139829889124311 0.0 0.0 0.0 {[SA]|[TG]}{I|L}KWWP{I|L};{[SA]|[TG]}K{I|L}WWP{I|L};{NN|[MP]|[D{I|L}]|[EV]}P{I|L}[NG]{M(Oxidation (M))|F}[KP];{NN|[MP]|[D{I|L}]|[EV]}PG{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[KP];{NN|[MP]|[D{I|L}]|[EV]}Q[RP]{M(Oxidation (M))|F}[KP];{NN|[MP]|[D{I|L}]|[EV]}PN{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[KP];{NN|[MP]|[D{I|L}]|[EV]}PGG{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[KP];{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}MR[KP];{NN|[MP]|[D{I|L}]|[EV]}Q{[WT]|[RM]}{I|L}[KP];{[SA]|[TG]}{I|L}{M(Oxidation (M))|F}[DV]{I|L}HV 2.2754;1.8773;1.6091;1.5421;1.4383;1.4329;1.2409;1.1927;1.1371;1.1098 -;-;-;-;-;-;-;-;-;- 1721 + 1 0.995 90972.4 1.0 11105 4948 16043 HBL1_DMSO_200M_050219_2,16055 HBL1_DMSO_200M_050219_2,16055,LFRHMALL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16056 84.538 187.0 416050.0 25 0 45547.0 + 13682 HQFPELMGV 9 122 529.2607481337119 1056.5069433342237 2 529.2610351443291 MULTI CID FTMS 0 0 0 16043 196436.703125 0.5658808728608338 3 -0.4340972900390625 13 Unmodified _HQFPELMGV_ ENSG00000004866|ENST00000323984|ST7;ENST00000464020.1_1_7:116859112-116863031:+|nuORF;nc|ENSG00000004866|Q9NRC1-2|ST7;nc|ENSG00000004866|Q9NRC1-3|ST7;nc|ENSG00000004866|Q9NRC1-4|ST7;nc|ENSG00000004866|Q9NRC1-5|ST7;nc|ENSG00000004866|Q9NRC1-6|ST7;nc|ENSG00000004866|Q9NRC1|ST7 22.736283301280096 0.2418982879461534 4 E{M(Oxidation (M))|F}[EP]{I|L}MR 7 4 34.937 0.0 0.0 3.3068 0.0 0.0 136.07217604804845 0.0 136.07217604804845 0.0 14.435188507315203 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.0 E{M(Oxidation (M))|F}[EP]{I|L}MR 3.3068 - 609 1 0.995 65818.4 1.0 11106 4948 16043 HBL1_DMSO_200M_050219_2,16056 HBL1_DMSO_200M_050219_2,16056,HQFPELMGV False True HQFPELMGV 84.537607 529.261035144329 5822820.0 16043.0 nc|ENSG00000004866|Q9NRC1-6|ST7;;nc|ENSG00000004866|Q9NRC1|ST7;;nc|ENSG00000004866|Q9NRC1-3|ST7;;ENSG00000004866|ENST00000323984|ST7;;nc|ENSG00000004866|Q9NRC1-2|ST7;;ENST00000464020.1_1_7:116859112-116863031:+|nuORF;;nc|ENSG00000004866|Q9NRC1-5|ST7;;nc|ENSG00000004866|Q9NRC1-4|ST7 7.332205454508464 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16057 84.551 800.0 288700.0 25 0 34272.0 -1 0 145 657.3447482168516 1969.0124152507549 3 657.6793090701103 MULTI CID FTMS 0 0 0 16043 191490.546875 0.4328962193818363 -3 0.3496856689453125 14 4 [{I|L}T][NP]N{I|L}{I|L}GAAGG 12 -1 61.348 0.0 0.0 3.1157 0.0 0.0 0.0 887.4071749322874 887.4071749322874 26.05188654682749 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [{I|L}T][NP]N{I|L}{I|L}GAAGG 3.1157 - 1859 + 1 0.995 170423.8 0.949999988079071 11107 4948 16043 HBL1_DMSO_200M_050219_2,16057 HBL1_DMSO_200M_050219_2,16057, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16058 84.565 800.0 198050.0 25 0 9232.5 + 4626 DAYVGYMTI 9 113 1032.4710051707625 1031.4637287041623 1 1032.472827136517 MULTI CID FTMS 0 0 0 16043 177732.640625 0.0575709894933614 4 -0.4882659912109375 15 Unmodified _DAYVGYMTI_ ENSG00000138081|ENST00000403359|FBXO11;nc|ENSG00000138081|Q86XK2-2|FBXO11;nc|ENSG00000138081|Q86XK2-3|FBXO11;nc|ENSG00000138081|Q86XK2-5|FBXO11;nc|ENSG00000138081|Q86XK2-6|FBXO11 115.6920309560759 0.0032017028976397 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVGYMT{I|L} 9 2 + 91.5 0.0 0.0 8.8709 8.8709 79.81 0.0 0.0 0.0 0.2555410447238984 16.478174818886387 0.2555410447238984 0.2555410447238984 0 1.4258337024346173 0.958607314841775 1.4802046884880935 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVGYMT{I|L};[YG]EVGYMT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DGVYMT{I|L};[YG]EGVYMT{I|L};[YV]GEGYMT{I|L};[YG]VEGYMT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DGYVMT{I|L};[YG]EGYVMT{I|L};[YV]ADGYMT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VDGYMT{I|L} 8.8709;8.8461;8.4083;8.3835;8.2176;8.1851;7.8798;7.855;7.6901;7.6824 -;-;-;-;-;-;-;-;-;- 15572 1 0.995 104658.9 0.8799999952316284 11108 4948 16043 HBL1_DMSO_200M_050219_2,16058 HBL1_DMSO_200M_050219_2,16058,DAYVGYMTI True True DAYVGYMTI 84.565328 1032.47282713652 26562064.0 16043.0 nc|ENSG00000138081|Q86XK2-3|FBXO11;;nc|ENSG00000138081|Q86XK2-6|FBXO11;;ENSG00000138081|ENST00000403359|FBXO11;;nc|ENSG00000138081|Q86XK2-2|FBXO11;;nc|ENSG00000138081|Q86XK2-5|FBXO11 8.040812969207764 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16059 84.579 800.0 211800.0 25 0 13076.0 + 45129 YQAPDIDVQL 10 179 581.2920041780851 1160.56945542297 2 581.2916137576103 MULTI CID FTMS 0 0 0 16043 168465.671875 0.0079728268495758 8 -1.02288818359375 16 Unmodified _YQAPDIDVQL_ ENSG00000105373|ENST00000246802|NOP53;ENST00000600410.5_1_19:48257983-48259211:+|nuORF 22.65808497894818 0.4596126414678359 4 {NN|[MP]|[D{I|L}]|[EV]}PDA[YQ]V[Q{I|L}] 10 6 + 28.05 0.0 0.0 2.4169 2.4169 63.575 0.0 0.0 0.0 1.7976995262051076 1.7976995262051076 1.7976995262051076 1.7609125905568137 0 0.2887254899964357 0.8239087409443188 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}PDA[YQ]V[Q{I|L}];{NN|[MP]|[D{I|L}]|[EV]}DPA[YQ]V[Q{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VD{I|L}[DP]AC(Carbamidomethyl (C)){I|L};{NN|[MP]|[D{I|L}]|[EV]}PDA[YQ]VG[{I|L}A];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VD{I|L}[DP]CQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}PDA[KP]DPPP;{NN|[MP]|[D{I|L}]|[EV]}PDARPSPPP;{NN|[MP]|[D{I|L}]|[EV]}DPA[YQ]VG[{I|L}A];[DV]EPA[YQ]V[Q{I|L}];[Y{I|L}]HHHDV[Q{I|L}] 2.4169;2.2652;2.262;2.2553;2.1319;2.1154;2.111;2.1036;2.0893;2.0562 -;-;-;-;-;-;-;-;-;- 4761 1 0.995 131849.0 0.8999999761581421 11109 4948 16043 HBL1_DMSO_200M_050219_2,16059 HBL1_DMSO_200M_050219_2,16059,YQAPDIDVQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16060 84.594 800.0 282070.0 25 0 18388.0 + 18870 LASQHEEL 8 220 309.49051870186247 925.4497267057876 3 309.4901611208916 MULTI CID FTMS 0 0 0 16043 153134.3125 0.3974505342059194 37 -4.238502502441406 17 Unmodified _LASQHEEL_ REV__ENSG00000111790|ENST00000229395|FGFR1OP2;REV__ENST00000395941.4_1_12:27107091-27110700:+|nuORF;REV__ENST00000551907.1_1_12:49783458-49783719:+|nuORF;REV__nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;REV__nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 14.581692164780916 0.6954967302934248 4 {I|L}{M(Oxidation (M))|F} 2 -1 17.959 0.0 0.0 1.9405 0.0 0.0 647.299993327419 0.0 647.299993327419 0.0 4.463950151760656 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F} 1.9405 - 228 1 0.995 182592.6 0.6700000166893005 11110 4948 16043 HBL1_DMSO_200M_050219_2,16060 HBL1_DMSO_200M_050219_2,16060,LASQHEEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16061 84.601 361.0 283410.0 25 0 27184.0 14524 IGRNQYIDL 9 125 546.2982374339033 1090.5819219346065 2 546.2997924685478 MULTI CID FTMS 0 0 0 16043 148378.40625 0.9543398654266964 -11 1.1577072143554688 18 Unmodified _IGRNQYIDL_ ENSG00000176853|ENST00000334705|FAM91A1;ENST00000446265.3_1:149647111-149647681:+|nuORF;ENST00000454544.2_1_1:147907560-147907839:+|nuORF 20.453626601364224 0.2830276176381075 4 KPP{NN|[MP]|[D{I|L}]|[EV]} 5 7 22.135 0.0 0.0 2.0296 0.0 0.0 522.2321644513687 0.0 522.2321644513687 0.0 9.916440611282624 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 KPP{NN|[MP]|[D{I|L}]|[EV]} 2.0296 - 357 1 0.995 85633.8 1.0 11111 4948 16043 HBL1_DMSO_200M_050219_2,16061 HBL1_DMSO_200M_050219_2,16061,IGRNQYIDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16062 84.604 128.0 586930.0 25 0 75058.0 + 23194 LSSEDEYSV 9 119 514.7245379535616 1027.434522973923 2 514.7251464724541 MULTI CID FTMS 0 0 0 16043 118663.140625 1.0 0 0.0 19 Unmodified _LSSEDEYSV_ REV__ENSG00000182378|ENST00000381657|PLCXD1 16.942295170755138 0.3780752226737986 4 {[TV]|[{I|L}S]}[VG]PECV{I|L} 9 -1 26.55 0.0 0.0 2.5841 0.0 0.0 0.0 126.93773277300431 126.93773277300431 8.591212212983809 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}[VG]PECV{I|L} 2.5841 - 935 1 0.995 63135.8 1.0 11112 4948 16043 HBL1_DMSO_200M_050219_2,16062 HBL1_DMSO_200M_050219_2,16062,LSSEDEYSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16063 84.61 357.0 286940.0 25 0 19293.0 + + 33600 TPVITSTQV 9 129 474.245853164799 0 474.2466003298759 PEAK CID FTMS 0 0 0 16043 120809.4375 0.936162839798221 1 -0.1134262084960937 20 Unmodified _SIPMNMRV_ nc|ENSG00000169876|Q685J3-2|MUC17;ENSG00000169876|ENST00000306151|MUC17 26.34127834903884 0.298120260672589 4 QD{I|L}PD 5 -1 12.015 0.0 0.0 1.2695 0.0 0.0 293.12121175637384 82.06698023013905 375.1881919865129 0.0 0.0 0.0 0.0 0 0.0 0.0 0.484825539911597 0.0 QD{I|L}PD 1.2695 - 187 + 1 0.995 83783.6 1.0 11113 4948 16043 HBL1_DMSO_200M_050219_2,16063 HBL1_DMSO_200M_050219_2,16063,SIPMNMRV False False TPVITSTQV 84.610036 474.246600329876 348543.25 16043.0 nc|ENSG00000169876|Q685J3-2|MUC17;;ENSG00000169876|ENST00000306151|MUC17 0.7776442393660545 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16065 84.614 12.0 4290500.0 25 0 682470.0 -1 ALMAAPLSL 9 70 451.75274496202985 901.4909369908596 2 451.7529479861259 MULTI CID FTMS 0 0 0 16064 4869047.5 0.3749048213798842 34 -3.916206359863281 1 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 63.835 0.0 0.0 7.081 7.081 81.68 0.0 0.0 0.0 11.505149978319906 8.384767769392738 8.384767769392738 3.0102999566398125 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[TV]|[{I|L}S]}PMAS{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};{[TV]|[{I|L}S]}[RD]D{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}[W{I|L}]A{I|L} 7.081;6.7471;5.8048;5.4709;4.6164;4.3078;4.2765;4.0871;2.4232;2.1204 -;-;-;-;-;-;-;-;-;- 127 1 0.997 43858.6 1.0 11114 4949 16064 HBL1_DMSO_200M_050219_2,16065 HBL1_DMSO_200M_050219_2,16065,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16066 84.616 34.0 1885000.0 25 0 266510.0 + 44567 YPFEPPQI 8 88 495.75042385863634 989.4862947840728 2 495.7504760622978 MULTI CID FTMS 0 0 0 16064 1173129.75 0.8323295901859825 1 -0.1283187866210937 2 Unmodified _YPFEPPQI_ ENSG00000077152|ENST00000646651|UBE2T;ENST00000487227.5_1_1:202302298-202304891:-|nuORF 53.57557251787612 0.1224291679108181 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EPPQ{I|L} 8 0 + 74.391 0.0 0.0 7.5181 7.5181 91.609 0.0 0.0 0.0 10.66946789630613 16.40978057358332 10.66946789630613 9.262137858390815 0 0.6421590589602533 1.5228787452803376 0.7614393726401688 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EPPQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EPP[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPPQ{I|L};[TA][NS]YPPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YEPPQ{I|L};{[QN]|[E{I|L}]|[KN]}MYPPQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EYPP[AG]{I|L};[TA][NS]YPP[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EPYPQ{I|L};[TA][NS]PYPQ{I|L} 7.5181;6.582;6.4398;6.3578;6.1356;5.8584;5.5038;5.4272;5.3086;5.2267 +;-;-;-;-;-;-;-;-;- + 356 1 0.997 55454.2 1.0 11115 4949 16064 HBL1_DMSO_200M_050219_2,16066 HBL1_DMSO_200M_050219_2,16066,YPFEPPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16067 84.617 17.0 3948400.0 25 0 630320.0 + 6162 DTATLLLKL 9 91 494.3081521730172 986.6017514128343 2 494.3080322146416 MULTI CID FTMS 0 0 0 16064 3228892.0 0.5951772075449022 -1 0.1134262084960937 3 Unmodified _DTATLLLKL_ REV__ENSG00000250120|ENST00000307360|PCDHA10;REV__nc|ENSG00000250120|Q9Y5I2-2|PCDHA10;REV__nc|ENSG00000250120|Q9Y5I2-3|PCDHA10 81.61307344734483 0.0171259190214613 4 TASE{I|L}{I|L}{I|L}K{I|L} 9 -1 + 81.926 0.0 0.0 8.3039 8.3039 98.084 0.0 0.0 0.0 52.36137394389458 11.082268588648247 11.082268588648247 81.92623024234015 0 1.8226825097560424 2.0 0.0 0.2887254899964357 TASE{I|L}{I|L}{I|L}K{I|L} 8.3039 - 214 + 1 0.997 56224.4 1.0 11116 4949 16064 HBL1_DMSO_200M_050219_2,16067 HBL1_DMSO_200M_050219_2,16067,DTATLLLKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16068 84.618 39.0 1864200.0 25 0 260690.0 + 41950 VQIGDIVTV 9 96 472.2771187762335 942.5396846192672 2 472.2771789431572 MULTI CID FTMS 0 0 0 16064 1648345.0 0.3938194281017839 -1 0.1134262084960937 4 Unmodified _VQIGDIVTV_ ENSG00000142534|ENST00000270625|RPS11 37.97399986684836 0.0865783450051559 4 {[TV]|[{I|L}S]}[PS]Q{I|L} 6 7 33.249 0.0 0.0 3.5276 0.0 0.0 0.0 314.1712380711793 314.1712380711793 12.786596949921218 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5796896906561032 0.3807196863200844 {[TV]|[{I|L}S]}[PS]Q{I|L} 3.5276 - 740 1 0.997 61653.6 1.0 11117 4949 16064 HBL1_DMSO_200M_050219_2,16068 HBL1_DMSO_200M_050219_2,16068,VQIGDIVTV True True VQIGDIVTV 84.617984 472.277178943157 68288024.0 16064.0 ENSG00000142534|ENST00000270625|RPS11 3.954705476760864 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16069 84.619 56.0 1829000.0 25 0 248350.0 + -1 VPELARHC 8 105 491.25028472092265 980.4860165086452 2 491.2504150271416 MULTI CID FTMS 0 0 0 16064 725956.4375 0.6115813264002583 -3 0.345703125 5 Carbamidomethyl (C) _VPELARHC(Carbamidomethyl (C))_ REV__ENSG00000145283|ENST00000273905|SLC10A6 18.13498045792455 0.6430038125133779 4 V{M(Oxidation (M))|F}[KQ]{[{M(Oxidation (M))|F}C]|[YS]}P{I|L} 8 -1 + 43.193 0.0 0.0 4.4052 4.4052 84.162 0.0 0.0 0.0 20.25117455943569 8.418817407949305 8.418817407949305 43.1926720723289 0 0.0 1.3010299956639813 0.3807196863200844 0.0 V{M(Oxidation (M))|F}[KQ]{[{M(Oxidation (M))|F}C]|[YS]}P{I|L} 4.4052 - 181 + 1 0.997 83333.3 1.0 11118 4949 16064 HBL1_DMSO_200M_050219_2,16069 HBL1_DMSO_200M_050219_2,16069,VPELARHC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16070 84.621 70.0 688560.0 25 0 62999.0 16241 IVPDLDLQQV 10 72 570.3188546388512 1138.6231563445024 2 570.3193237185478 MULTI CID FTMS 0 0 0 16064 688561.6875 0.7561829197453341 -1 0.1134262084960937 6 Unmodified _IVPDLDLQQV_ ENSG00000159256|ENST00000400485|MORC3 14.838274106304384 0.5985701837916485 4 {NN|[MP]|[D{I|L}]|[EV]}PD{I|L}QQ 7 4 34.213 0.0 0.0 3.0048 0.0 0.0 0.0 326.2079701474899 326.2079701474899 19.0625071795742 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}PD{I|L}QQ 3.0048 - 327 1 0.997 44234.1 1.0 11119 4949 16064 HBL1_DMSO_200M_050219_2,16070 HBL1_DMSO_200M_050219_2,16070,IVPDLDLQQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16071 84.623 113.0 767180.0 25 0 136390.0 + 4657 DAYVLPKLY 9 80 541.3001215762505 1080.585690219301 2 541.3007079958916 MULTI CID FTMS 0 0 0 16064 496220.90625 0.0034671155932215 12 -1.4729156494140625 7 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 41.8396318013385 0.0653578398400075 4 {[DA]|[EG]}YV{I|L}PK{I|L}Y 9 0 + 68.075 0.0 0.0 6.2998 6.2998 82.179 0.0 0.0 0.0 15.775006193212278 5.2827377716704405 5.2827377716704405 5.2827377716704405 0 1.5044321917401078 1.5228787452803376 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L}Y;{[DA]|[EG]}YV{I|L}PKY{I|L} 6.2998;5.8109 +;- + 142 + 1 0.997 72109.7 1.0 11120 4949 16064 HBL1_DMSO_200M_050219_2,16071 HBL1_DMSO_200M_050219_2,16071,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16072 84.626 136.0 593640.0 25 0 70789.0 + 42910 VVPQQLLTV 9 109 498.8080665076233 995.6015800820468 2 498.8081848025322 MULTI CID FTMS 0 0 0 16064 467125.96875 0.7563086728712722 3 -0.3748397827148437 8 Unmodified _VVPQQLLTV_ ENSG00000072310|ENST00000261646|SREBF1;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1 23.1484247019978 0.2366544122328345 4 [QP]Q{I|L}{I|L}T 6 3 34.816 0.0 0.0 3.497 0.0 0.0 0.0 312.1925542161907 312.1925542161907 15.123337350737252 0.0 0.0 0.0 0 0.0 0.744727494896694 0.3054621874040891 0.3054621874040891 + [QP]Q{I|L}{I|L}T 3.497 + + 725 1 0.997 66365.2 1.0 11121 4949 16064 HBL1_DMSO_200M_050219_2,16072 HBL1_DMSO_200M_050219_2,16072,VVPQQLLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16073 84.631 281.0 389140.0 25 0 39977.0 + 26544 NVIKVSVYL 9 132 517.8155780284902 1033.6166031237804 2 517.8163940310478 MULTI CID FTMS 0 0 0 16064 328900.65625 0.5020722460141465 2 -0.3206710815429687 9 Unmodified _NVIKVSVYL_ ENSG00000169727|ENST00000578552|GPS1;ENST00000392357.1_1_17:80012338-80013241:+|nuORF;nc|ENSG00000169727|Q13098-6|GPS1;nc|ENSG00000169727|Q13098-7|GPS1;nc|ENSG00000169727|Q13098|GPS1 62.57269311338072 0.0246576765497938 4 [K{I|L}][TA]{I|L}NVY{I|L} 9 6 + 34.177 0.0 0.0 3.3065 3.3065 63.564 0.0 0.0 0.0 0.8398012892939377 4.813536224793253 0.8398012892939377 0.8398012892939377 0 0.7742275032520141 0.0 1.7614393726401687 0.0 [K{I|L}][TA]{I|L}NVY{I|L};[{I|L}A][KT]{I|L}NVY{I|L};[K{I|L}]V[VS]NVY{I|L};[K{I|L}][TA]{I|L}GGVY{I|L};[{I|L}A][KT]{I|L}GGVY{I|L};[K{I|L}]V{[NV]|[RG]}SVY{I|L};[K{I|L}]V[VS]GGVY{I|L};{[TV]|[{I|L}S]}[Q{I|L}][KA]VY{I|L};[{I|L}A]G{[TV]|[{I|L}S]}[KA]VY{I|L};[Q{I|L}]{[TV]|[{I|L}S]}[KA]VY{I|L} 3.3065;3.2253;2.7678;2.4156;2.3344;2.2172;1.8769;1.5368;1.2127;1.1236 -;-;-;-;-;-;-;-;-;- 980 1 0.997 86356.0 1.0 11122 4949 16064 HBL1_DMSO_200M_050219_2,16073 HBL1_DMSO_200M_050219_2,16073,NVIKVSVYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16074 84.634 125.0 775740.0 25 0 98116.0 + 12261 GQYSHLVLL 9 119 515.2906683742455 0 515.2896606326103 PEAK CID FTMS 0 0 0 16064 304583.125 0.4196850207223209 -1 0.1134262084960937 10 Unmodified _GQYSHLVLL_ ENSG00000080608|ENST00000397885|PUM3 41.8396318013385 0.053988301646488 4 {I|L}V{[QG]|[NA]}YHD 7 7 23.866 0.0 0.0 2.3203 0.0 0.0 131.09143916774957 82.06701074771718 213.15844991546675 0.0 0.0 0.0 0.0 0 0.5 0.0 0.5941876774005248 0.3494850021680094 {I|L}V{[QG]|[NA]}YHD 2.3203 - 591 + 1 0.997 77405.4 1.0 11123 4949 16064 HBL1_DMSO_200M_050219_2,16074 HBL1_DMSO_200M_050219_2,16074,GQYSHLVLL True True GQYSHLVLL 84.633996 515.28966063261 5595722.5 16064.0 ENSG00000080608|ENST00000397885|PUM3 -0.2014505416154861 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16075 84.647 743.0 457570.0 25 0 45732.0 + 42846 VVLEEIPKL 9 186 520.3232724868012 1038.6319920404023 2 520.3236572146416 MULTI CID FTMS 0 0 0 16064 281702.625 0.1375299806583484 -3 0.345703125 11 Unmodified _VVLEEIPKL_ ENSG00000116266|ENST00000370008|STXBP3 69.10491478415734 0.0214449631113747 4 VV{I|L}EE{I|L}PK{I|L} 9 0 + 99.936 0.0 0.0 9.6219 9.6219 96.31 0.0 0.0 0.0 61.044794321544 5.567657157894104 5.567657157894104 13.802112417116064 0 1.0021934810768762 2.0 1.1989700043360187 0.0 + + VV{I|L}EE{I|L}PK{I|L};VV{I|L}EE{I|L}{I|L}KP;VV{I|L}EE[KP]{I|L}{I|L};VV{I|L}[HA][R{M(Oxidation (M))|F}]VV;VV{I|L}[HA]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L};[KP]{I|L}Q{I|L}ERR;[{I|L}P]KQ{I|L}ERR;[KA]KKV{I|L}[HC]{I|L};[KA]KK{I|L}V[HC]{I|L} 9.6219;8.293;7.2266;4.1662;3.9889;0.68671;0.63192;0.54156;0.42127 +;-;-;-;-;-;-;-;- + 1464 + 1 0.997 256342.2 1.0 11124 4949 16064 HBL1_DMSO_200M_050219_2,16075 HBL1_DMSO_200M_050219_2,16075,VVLEEIPKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16076 84.65 144.0 442590.0 25 0 44144.0 + 25692 NIANHFFTV 9 109 531.772520201373 1061.530487469546 2 531.7724487185478 MULTI CID FTMS 0 0 0 16064 255983.34375 0.5639716792337307 -1 0.1134262084960937 12 Unmodified _NIANHFFTV_ ENSG00000117143|ENST00000367925|UAP1;nc|ENSG00000117143|Q16222-2|UAP1;nc|ENSG00000117143|Q16222-3|UAP1 41.8396318013385 0.0653578398400075 4 {[QV]|[N{I|L}]|[RA]|[KV]}ANQR{M(Oxidation (M))|F}TV 9 2 + 45.018 0.0 0.0 4.2409 4.2409 74.658 0.0 0.0 0.0 12.615618994235689 6.020599913279625 6.020599913279625 6.020599913279625 0 1.298455006504028 2.0 0.2887254899964357 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}ANQR{M(Oxidation (M))|F}TV;{[QV]|[N{I|L}]|[RA]|[KV]}ANQR{M(Oxidation (M))|F}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}ANH{M(Oxidation (M))|F}{M(Oxidation (M))|F}TV;{[QV]|[N{I|L}]|[RA]|[KV]}AD[WP]{M(Oxidation (M))|F}TV;{[QV]|[N{I|L}]|[RA]|[KV]}RR[{M(Oxidation (M))|F}E]EV;{[QV]|[N{I|L}]|[RA]|[KV]}WV[R{M(Oxidation (M))|F}]EV;{[QV]|[N{I|L}]|[RA]|[KV]}{[CT]|[{M(Oxidation (M))|F}G]}[HK]{M(Oxidation (M))|F}TV;{[QV]|[N{I|L}]|[RA]|[KV]}RR[{M(Oxidation (M))|F}E]D{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}ANQ{[{M(Oxidation (M))|F}D]|MM}K{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}WV[R{M(Oxidation (M))|F}]D{I|L} 4.2409;3.6737;3.0525;3.0184;2.7817;2.6411;2.5005;2.2145;2.1761;2.0739 -;-;+;-;-;-;-;-;-;- + 336 + 1 0.997 57916.4 1.0 11125 4949 16064 HBL1_DMSO_200M_050219_2,16076 HBL1_DMSO_200M_050219_2,16076,NIANHFFTV True True NIANHFFTV 84.649773 531.772448718548 5282520.0 16064.0 ENSG00000117143|ENST00000367925|UAP1;;nc|ENSG00000117143|Q16222-2|UAP1;;nc|ENSG00000117143|Q16222-3|UAP1 6.125383694966634 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16077 84.654 207.0 473690.0 25 0 44769.0 + 39035 TVTLCSRYI 9 128 528.2829374527565 1054.551321972313 2 528.2845336794853 MULTI CID FTMS 0 0 0 16064 248240.03125 1.0 0 0.0 13 Unmodified _TVTLCSRYI_ ENST00000263354.7_1_19:47991268-47991526:-|nuORF 34.10243960390752 0.1078313939113124 4 VVPT 4 8 32.211 0.0 0.0 3.0545 0.0 0.0 0.0 655.2900400050884 655.2900400050884 5.329153108784716 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.0 VVPT 3.0545 - 1536 1 0.997 80802.0 1.0 11126 4949 16064 HBL1_DMSO_200M_050219_2,16077 HBL1_DMSO_200M_050219_2,16077,TVTLCSRYI True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16078 84.66 373.0 426010.0 25 0 31772.0 27087 PFACKSAL 8 109 418.71869385140826 835.4228347696165 2 418.7187377810478 MULTI CID FTMS 0 0 0 16064 239951.515625 0.5206632515195692 -1 0.1134262084960937 14 Unmodified _PFACKSAL_ ENSG00000256463|ENST00000537592|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3 11.114462752807354 0.7467182956244686 4 [{M(Oxidation (M))|F}E]NWK{I|L} 6 5 + 31.164 0.0 0.0 3.7303 3.7303 68.804 0.0 0.0 0.0 6.478174818886373 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.0 0.0 0.0 0.6549471895720985 [{M(Oxidation (M))|F}E]NWK{I|L};[{M(Oxidation (M))|F}E]NW{I|L}K;[{M(Oxidation (M))|F}E]GGWK{I|L};[{M(Oxidation (M))|F}E]GGW{I|L}K;[WK]{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.7303;3.37;2.6027;2.2424;0.65212 -;-;-;-;- 160 + 1 0.997 126471.0 1.0 11127 4949 16064 HBL1_DMSO_200M_050219_2,16078 HBL1_DMSO_200M_050219_2,16078,PFACKSAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16079 84.674 800.0 257930.0 25 0 26710.0 33234 SFNFQIQSRV 10 148 613.3215575442888 1224.6285621553775 2 613.3204833865166 MULTI CID FTMS 0 0 0 16064 171728.015625 0.7017161237045368 1 -0.1283187866210937 15 Unmodified _SFNFQIQSRV_ ENSG00000188089|ENST00000696112|PLA2G4E;nc|ENSG00000188089|Q3MJ16|PLA2G4E 14.838274106304384 0.5985701837916485 4 {NN|[MP]|[D{I|L}]|[EV]}[RD]K{I|L}VY{[CT]|[{M(Oxidation (M))|F}G]} 10 9 + 35.353 0.0 0.0 2.8869 2.8869 67.084 0.0 0.0 0.0 0.950980400142562 0.4575749056067479 0.4575749056067479 3.1137816695353777 0 0.0 1.3979400086720375 0.25 0.0 {NN|[MP]|[D{I|L}]|[EV]}[RD]K{I|L}VY{[CT]|[{M(Oxidation (M))|F}G]};{NN|[MP]|[D{I|L}]|[EV]}[RD]{I|L}KVY{[CT]|[{M(Oxidation (M))|F}G]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HK]K{I|L}VY{[CT]|[{M(Oxidation (M))|F}G]};[YV]A{I|L}{I|L}{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HK]{I|L}KVY{[CT]|[{M(Oxidation (M))|F}G]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]PK{I|L}VY{[CT]|[{M(Oxidation (M))|F}G]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}V[HV]VD[NP];[DN]DV[HV]V{I|L}AM{I|L};{[SA]|[TG]}[RN]AK{I|L}VY{[CT]|[{M(Oxidation (M))|F}G]};{[QN]|[E{I|L}]|[KN]}WAK{I|L}VY{[CT]|[{M(Oxidation (M))|F}G]} 2.8869;2.6326;2.5446;2.3405;2.2903;2.2003;2.1873;2.1534;2.0671;2.0511 -;-;-;-;-;-;-;-;-;- 1451 1 0.997 153289.9 0.8700000047683716 11128 4949 16064 HBL1_DMSO_200M_050219_2,16079 HBL1_DMSO_200M_050219_2,16079,SFNFQIQSRV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16080 84.689 800.0 378480.0 25 0 34285.0 + 22962 YLITGNLEKL 10 203 581.3297532783104 1160.6449536234206 2 582.3334838747978 MULTI CID FTMS 0 0 0 16064 153877.140625 0.0727422172819394 -5 0.5823440551757812 16 Unmodified _LSFIEALIQQ_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 25.399314129420983 0.3980215340001851 4 [Y{I|L}][HN]{I|L}{I|L}YE 8 7 34.531 0.0 0.0 2.9751 0.0 0.0 0.0 112.09512017199329 112.09512017199329 -6.368617341927688 0.0 -6.368617341927688 0.0 0 0.0 2.0 0.0 0.2302046884880938 [Y{I|L}][HN]{I|L}{I|L}YE 2.9751 - 6733 1 0.997 220002.1 0.8500000238418579 11129 4949 16064 HBL1_DMSO_200M_050219_2,16080 HBL1_DMSO_200M_050219_2,16080,LSFIEALIQQ False False YLITGNLEKL 84.689265 582.333483874798 912146.25 16064.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 4.382190863291423 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16081 84.696 359.0 322190.0 25 0 30981.0 6475 EAGHFFDASI 10 151 547.2520450361264 1092.4895371390528 2 547.7516967654228 MULTI CID FTMS 0 0 0 16064 119600.0625 0.4677560231714616 -1 0.1134262084960937 17 Unmodified _EAGHFFDASI_ ENSG00000225697|ENST00000395550|SLC26A6;ENST00000489483.5_1_3:48663421-48664602:-|nuORF;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-5|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6 19.256988751693697 0.5244284437930726 4 DM{M(Oxidation (M))|F}AMMS{I|L} 8 7 26.941 0.0 0.0 2.466 0.0 0.0 148.10087854705904 0.0 148.10087854705904 0.0 11.11657463061279 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 DM{M(Oxidation (M))|F}AMMS{I|L} 2.466 - 1772 + 1 0.997 96642.9 1.0 11130 4949 16064 HBL1_DMSO_200M_050219_2,16081 HBL1_DMSO_200M_050219_2,16081,EAGHFFDASI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16082 84.71 800.0 149900.0 25 0 11741.0 -1 0 118 1096.9801820561568 2191.9458111791137 2 1096.982104480267 MULTI CID FTMS 0 0 0 16064 104975.765625 0.9329183757918446 -1 0.1134262084960937 18 4 [NP]N{I|L}{I|L}G 6 -1 18.734 0.0 0.0 0.85467 0.0 0.0 0.0 1580.5906835758512 1580.5906835758512 9.781381439366188 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 [NP]N{I|L}{I|L}G 0.85467 - 662 1 0.997 84768.9 0.7300000190734863 11131 4949 16064 HBL1_DMSO_200M_050219_2,16082 HBL1_DMSO_200M_050219_2,16082, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16083 84.725 800.0 109370.0 25 0 26865.0 + 43405 WQTKIERWLLL 11 106 743.4353996055175 1484.856246277835 2 743.4380981326103 MULTI CID FTMS 0 0 0 16064 103505.8359375 0.5456949248043653 -1 0.1134262084960937 19 Unmodified _WQTKIERWLLL_ REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF 0.5059551277355931 0.8727608062196215 4 {I|L} 1 -1 9.2082 0.0 0.0 0.62014 0.0 0.0 1353.7613498928724 0.0 1353.7613498928724 0.0 8.829583969833159 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.62014 + + 55 + 1 0.997 74639.1 0.75 11132 4949 16064 HBL1_DMSO_200M_050219_2,16083 HBL1_DMSO_200M_050219_2,16083,WQTKIERWLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16084 84.738 800.0 152470.0 25 0 13011.0 + 22756 LQMEEEYIQQL 11 161 712.3425410203057 1422.6705291074113 2 712.3410522341728 MULTI CID FTMS 0 0 0 16064 91471.1796875 0.9964440284477724 -1 0.1134262084960937 20 Unmodified _LQMEEEYIQQL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 55.23464941255904 0.0886405999673349 4 [AG]{I|L}EMEEY{I|L} 9 7 48.567 0.0 0.0 3.4138 0.0 0.0 0.0 384.18818492999793 384.18818492999793 31.00379364601565 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.7614393726401688 0.0 [AG]{I|L}EMEEY{I|L} 3.4138 - 2553 1 0.997 91332.3 0.8100000023841858 11133 4949 16064 HBL1_DMSO_200M_050219_2,16084 HBL1_DMSO_200M_050219_2,16084,LQMEEEYIQQL True True LQMEEEYIQQL 84.738462 712.341052234173 1392312.375 16064.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 6.213951746622722 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16086 84.743 16.0 3198000.0 25 0 296660.0 + 9855 FPFGKIGTV 9 69 483.2765192074866 964.5384854817733 2 483.2766296267509 MULTI CID FTMS 0 0 0 16085 2248099.75 0.3119341068437914 7 -0.90423583984375 1 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 24.020572477871973 0.2255576514309169 4 {M(Oxidation (M))|F}PE 3 7 30.445 0.0 0.0 3.1565 0.0 0.0 573.3499431238907 0.0 573.3499431238907 0.0 9.810450018512924 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}PE 3.1565 - 167 1 0.997 45281.8 1.0 11134 4950 16085 HBL1_DMSO_200M_050219_2,16086 HBL1_DMSO_200M_050219_2,16086,FPFGKIGTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16087 84.744 38.0 983040.0 25 0 133940.0 + 42792 VVISSDGQFAL 11 49 568.3034049009416 1134.592256868683 2 568.3035766482353 MULTI CID FTMS 0 0 0 16085 491353.3125 0.1297657853626052 4 -0.5165328979492188 2 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 13.90604991867851 0.7458848613461305 4 {[DA]|[EG]}{I|L} 3 8 24.437 0.0 0.0 2.1538 0.0 0.0 0.0 832.4206924978424 832.4206924978424 5.02697515943353 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[DA]|[EG]}{I|L} 2.1538 - 31 1 0.997 35592.9 1.0 11135 4950 16085 HBL1_DMSO_200M_050219_2,16087 HBL1_DMSO_200M_050219_2,16087,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16088 84.746 76.0 757740.0 25 0 155110.0 14430 IFPSLDELIE 10 60 588.3142142641116 1174.613875595023 2 588.3145629763603 MULTI CID FTMS 0 0 0 16085 526101.4375 0.4398640551220643 7 -0.90423583984375 3 Unmodified _IFPSLDELIE_ ENSG00000076928|ENST00000354532|ARHGEF1;ENST00000595897.5_1_19:42402462-42407822:+|nuORF;ENST00000600274.5_1_19:42396347-42410935:+|nuORF;nc|ENSG00000076928|Q92888-2|ARHGEF1;nc|ENSG00000076928|Q92888-3|ARHGEF1;nc|ENSG00000076928|Q92888-4|ARHGEF1 18.1463463914782 0.5430639438673815 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPD 5 6 41.822 0.0 0.0 3.5605 0.0 0.0 0.0 602.3056433537433 602.3056433537433 31.443029007087723 0.0 0.0 0.0 0 0.4247425010840047 1.154901959985743 0.3807196863200844 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPD 3.5605 - 44 + 1 0.997 52956.2 1.0 11136 4950 16085 HBL1_DMSO_200M_050219_2,16088 HBL1_DMSO_200M_050219_2,16088,IFPSLDELIE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16089 84.748 81.0 627070.0 25 0 117890.0 + + -1 DGLDIQLKV 9 90 500.7904921245437 999.5664313158874 2 500.7874633669853 MULTI CID FTMS 0 0 0 16085 447499.71875 1.0 0 0.0 4 Carbamidomethyl (C) _VLPRRC(Carbamidomethyl (C))TV_ nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3;nc|ENSG00000139734|Q9NSV4-7|DIAPH3;ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3 15.768221252438446 0.6779680726941459 4 {[RE]|[WV]}D{I|L}Q{I|L}KV 8 -1 + 44.18 0.0 0.0 4.42 4.42 79.929 0.0 0.0 0.0 14.514581783080516 11.8943306386236 11.8943306386236 9.262137858390808 0 0.7059771852360797 0.0 0.0 0.8807196863200843 {[RE]|[WV]}D{I|L}Q{I|L}KV;{[RE]|[WV]}D{I|L}[AG]{I|L}KV;{NN|[MP]|[D{I|L}]|[EV]}GA{I|L}{[WT]|[RM]}[KP];{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{[WT]|[RM]}[KP];[DG]{I|L}A{I|L}{[WT]|[RM]}[KP];{NN|[MP]|[D{I|L}]|[EV]}GA[SG]KK[KP];{NN|[MP]|[D{I|L}]|[EV]}Q[SG]KK[KP];[Q{I|L}]D{I|L}{[WT]|[RM]}[KP];[PS]TA{I|L}{[WT]|[RM]}[KP];[DV]AA{I|L}{[WT]|[RM]}[KP] 4.42;3.4933;2.8604;2.4113;2.0819;1.3611;0.90662;0.88778;0.88433;0.836 -;-;-;-;-;-;-;-;-;- 217 + 1 0.997 44363.1 1.0 11137 4950 16085 HBL1_DMSO_200M_050219_2,16089 HBL1_DMSO_200M_050219_2,16089,VLPRRCTV False False DGLDIQLKV 84.747529 500.787463366985 4518776.5 16085.0 nc|ENSG00000139734|Q9NSV4-6|DIAPH3;;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;;nc|ENSG00000139734|Q9NSV4-1|DIAPH3;;nc|ENSG00000139734|Q9NSV4-7|DIAPH3;;ENSG00000139734|ENST00000400324|DIAPH3;;nc|ENSG00000139734|Q9NSV4-4|DIAPH3 4.950507640838623 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16090 84.75 143.0 500760.0 25 0 31087.0 + 44999 YPSLPTMTV 9 112 504.75687580551306 1007.499198677826 2 504.7574035525322 MULTI CID FTMS 0 0 0 16085 422263.0625 0.3297455981105322 -3 0.38751220703125 5 Unmodified _YPSLPTMTV_ ENSG00000089289|ENST00000356413|IGBP1 89.42679046578446 0.015225546354407 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[TP]MTV 9 0 + 49.732 0.0 0.0 4.9362 4.9362 69.365 0.0 0.0 0.0 1.0522072229343848 7.2184874961635614 1.0522072229343848 1.0522072229343848 0 1.1549471895720984 1.3979400086720375 1.7302046884880935 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[TP]MTV;{[TV]|[{I|L}S]}PY[TP]MTV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}[TP]MTV;[TP]VY[TP]MTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[TP][PA]Y;{[TV]|[{I|L}S]}PY[TP][PA]Y;[TP]M{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}[TP][PA]Y;[TP]MTV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV;[TP]VY[TP][PA]Y 4.9362;4.8318;4.7614;4.3197;4.2197;4.1153;4.1152;4.0449;3.6233;3.6032 +;-;-;-;-;-;-;-;-;- + 789 1 0.997 56827.5 1.0 11138 4950 16085 HBL1_DMSO_200M_050219_2,16090 HBL1_DMSO_200M_050219_2,16090,YPSLPTMTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16091 84.762 668.0 236900.0 25 0 8474.1 + 30674 RFPEELTQTF 10 160 634.3192248256998 1266.6238967181996 2 634.3198730349541 MULTI CID FTMS 0 0 0 16085 251782.421875 0.559695984448346 15 -1.6612091064453125 6 Unmodified _RFPEELTQTF_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 55.50274090549119 0.048383292844968 4 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}TA[HM]TQT 10 7 52.387 0.0 0.0 4.136 0.0 0.0 0.0 162.0503853258746 162.0503853258746 12.017127498657274 0.0 0.0 0.0 0 0.5 0.0 2.4291746928241125 0.3252574989159953 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}TA[HM]TQT 4.136 - 5509 1 0.997 121576.7 1.0 11139 4950 16085 HBL1_DMSO_200M_050219_2,16091 HBL1_DMSO_200M_050219_2,16091,RFPEELTQTF True True RFPEELTQTF 84.762033 634.319873034954 38104500.0 16085.0 ENSG00000254772|ENST00000329251|EEF1G;;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;;nc|ENSG00000254772|P26641-2|EEF1G 7.970407644907634 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16092 84.774 697.0 230610.0 25 0 17722.0 29661 QNRRYHFLSSL 11 113 710.8746360791633 1419.7347192251266 2 710.8751708865166 MULTI CID FTMS 0 0 0 16085 241647.625 1.0 0 0.0 7 Unmodified _QNRRYHFLSSL_ nc|ENSG00000187045|Q8IU80-2|TMPRSS6 32.78568957990786 0.3235288296534633 4 {[TV]|[{I|L}S]}TVMDNQ{I|L}VTS{I|L} 13 10 + 108.73 0.0 0.0 7.6583 7.6583 81.87 0.0 0.0 0.0 8.240437707819837 10.696083918116416 8.240437707819837 2.368507712272546 0 1.8667053245199623 1.2218487496163564 1.385151878060192 1.1307196863200843 {[TV]|[{I|L}S]}TVMDNQ{I|L}VTS{I|L};{[TV]|[{I|L}S]}{I|L}SMDNQ{I|L}VTS{I|L};[{I|L}T]SVMDNQ{I|L}VTS{I|L};{[TV]|[{I|L}S]}TVMDGGQ{I|L}VTS{I|L};{[TV]|[{I|L}S]}TVMDN[AG]{I|L}VTS{I|L};{[MG]|[TS]}{I|L}VMDNQ{I|L}VTS{I|L};[{I|L}T]VSMDNQ{I|L}VTS{I|L};{[TV]|[{I|L}S]}{I|L}MSDNQ{I|L}VTS{I|L};{[TV]|[{I|L}S]}{I|L}SMDN[AG]{I|L}VTS{I|L};{[TV]|[{I|L}S]}{I|L}SMDGGQ{I|L}VTS{I|L} 7.6583;7.4915;7.0779;7.0193;7.0193;6.9217;6.911;6.9092;6.8524;6.8524 -;-;-;-;-;-;-;-;-;- 3802 1 0.997 118060.2 1.0 11140 4950 16085 HBL1_DMSO_200M_050219_2,16092 HBL1_DMSO_200M_050219_2,16092,QNRRYHFLSSL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 16093 84.787 720.0 211370.0 25 0 23741.0 + 22728 LQIEDFEARIA 11 116 652.845947096135 1303.67734125907 2 652.8455688357353 MULTI CID FTMS 0 0 0 16085 206936.015625 1.0 0 0.0 8 Unmodified _LQIEDFEARIA_ ENSG00000186010|ENST00000507754|NDUFA13;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13 55.24861242081279 0.0885632729458983 4 {I|L}Q{I|L}ED{M(Oxidation (M))|F}EARA{I|L} 11 2 + 97.468 0.0 0.0 7.4764 7.4764 94.697 0.0 0.0 0.0 75.41780408275592 9.383680149911626 9.383680149911626 23.10789832953138 0 1.8182503180159344 1.3979400086720375 0.9247425010840048 0.4247425010840047 {I|L}Q{I|L}ED{M(Oxidation (M))|F}EARA{I|L};{I|L}[AG]{I|L}ED{M(Oxidation (M))|F}EARA{I|L};{I|L}Q{I|L}EDA[{M(Oxidation (M))|F}E]RA{I|L};{I|L}Q{I|L}EW[{M(Oxidation (M))|F}E]RA{I|L} 7.4764;5.7039;5.6208;5.1164 -;-;-;- 247 + 1 0.997 122068.0 1.0 11141 4950 16085 HBL1_DMSO_200M_050219_2,16093 HBL1_DMSO_200M_050219_2,16093,LQIEDFEARIA True True LQIEDFEARIA 84.786643 652.845568835735 2157060.5 16085.0 ENST00000586674.1_1_19:19627047-19643527:+|nuORF;;nc|ENSG00000186010|Q9P0J0-2|NDUFA13;;ENSG00000186010|ENST00000507754|NDUFA13 4.643082936604817 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16094 84.793 331.0 426590.0 25 0 92553.0 15748 ISADILKLV 9 146 486.3126863167544 0 486.3135864138603 PEAK CID FTMS 0 0 0 16085 170240.234375 1.0 0 0.0 9 Unmodified _ISADILKLV_ ENSG00000115904|ENST00000402219|SOS1;nc|ENSG00000115904|Q07889-2|SOS1 23.1484247019978 0.1725298825155634 4 {I|L}{I|L}S 3 7 16.555 0.0 0.0 1.7056 0.0 0.0 117.10173874503388 537.2808321588499 654.3825709038838 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}{I|L}S 1.7056 - 423 + 1 0.997 107384.4 1.0 11142 4950 16085 HBL1_DMSO_200M_050219_2,16094 HBL1_DMSO_200M_050219_2,16094,ISADILKLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16095 84.806 775.0 286850.0 25 0 22708.0 + 22554 LPWPFRNKV 9 188 578.8354587193315 1155.656364505463 2 578.8349487185478 MULTI CID FTMS 0 0 0 16085 168299.921875 0.7177793477875524 7 -0.90423583984375 10 Unmodified _LPWPFRNKV_ ENSG00000056558|ENST00000373887|TRAF1;nc|ENSG00000056558|Q13077-2|TRAF1 39.94969957227396 0.0757326808254658 4 {I|L}PWV[H{I|L}][KT]Y 9 5 + 55.544 0.0 0.0 4.8062 4.8062 83.877 0.0 0.0 0.0 33.273898832665395 2.351007216819866 2.351007216819866 17.22947246032281 0 0.7302046884880937 1.5228787452803376 0.5 0.7742275032520141 {I|L}PWV[H{I|L}][KT]Y;{I|L}P[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}APT{I|L};{I|L}P[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}SVPV;{I|L}T{I|L}W{[QN]|[E{I|L}]|[KN]}APT{I|L};{I|L}{I|L}TW{[QN]|[E{I|L}]|[KN]}SVPV;VKW[WR]APT{I|L};VKW[WR]SVPV;VK[R{M(Oxidation (M))|F}][QT]{I|L}[HQ];VK{[DA]|[EG]}[WR]APT{I|L};VK{[DA]|[EG]}[WR]SVPV 4.8062;3.3154;3.2338;1.4383;1.4225;0.98619;0.90465;0.30384;0.1894;0.10785 -;-;-;-;-;-;-;-;-;- 1570 + 1 0.997 169668.1 1.0 11143 4950 16085 HBL1_DMSO_200M_050219_2,16095 HBL1_DMSO_200M_050219_2,16095,LPWPFRNKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16096 84.812 308.0 379770.0 25 0 26436.0 + -1 AMFDHIPVGV 10 146 543.2764301475237 1084.5383073618473 2 543.7795898318291 MULTI CID FTMS 0 0 0 16085 162191.65625 0.4092103719477157 -1 0.1283187866210937 11 Oxidation (M) _LTRWM(Oxidation (M))YTV_ ENSG00000100220|ENST00000216038|RTCB;ENST00000487704.5_1_22:32797732-32808215:-|nuORF 32.116972079565 0.368454113111938 4 [NS]{I|L}E{[{M(Oxidation (M))|F}H]|[RQ]}PE{I|L} 9 -1 + 25.446 0.0 0.0 2.3462 2.3462 60.29 0.0 0.0 0.0 0.1131684585676993 0.1131684585676993 0.1131684585676993 0.1131684585676993 0 0.0 0.0 0.9916440611282626 0.0 [NS]{I|L}E{[{M(Oxidation (M))|F}H]|[RQ]}PE{I|L};E{I|L}K[W{M(Oxidation (M))|F}]YTV;Q[VS]E{[{M(Oxidation (M))|F}H]|[RQ]}PE{I|L};E{I|L}K[W{M(Oxidation (M))|F}]YS{I|L};E{I|L}K{I|L}W{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]};E[KG]E{[{M(Oxidation (M))|F}H]|[RQ]}PE{I|L};E[Q{I|L}][W{M(Oxidation (M))|F}]YTV;E[WK]{[{M(Oxidation (M))|F}H]|[RQ]}PE{I|L};E[VS]Q{[{M(Oxidation (M))|F}H]|[RQ]}PE{I|L};E[Q{I|L}][W{M(Oxidation (M))|F}]YS{I|L} 2.3462;2.3358;2.0687;2.0582;1.9725;1.9063;1.3233;1.3049;1.304;1.0457 -;-;-;-;-;-;-;-;-;- 1326 + 1 0.997 94471.1 1.0 11144 4950 16085 HBL1_DMSO_200M_050219_2,16096 HBL1_DMSO_200M_050219_2,16096,LTRWMYTV False False AMFDHIPVGV 84.811683 543.779589831829 4302369.0 16085.0 ENSG00000100220|ENST00000216038|RTCB;;ENST00000487704.5_1_22:32797732-32808215:-|nuORF 5.949261665344238 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16097 84.826 781.0 85963.0 25 0 22868.0 -1 0 88 920.9254137112556 1839.8362744893109 2 920.929248034954 MULTI CID FTMS 0 0 0 16085 159520.78125 0.5530581136999589 2 -0.24652099609375 12 4 {[DA]|[EG]}VV 4 -1 32.792 0.0 0.0 1.7823 0.0 0.0 0.0 1452.6109991809703 1452.6109991809703 15.10090614668492 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 {[DA]|[EG]}VV 1.7823 - 346 1 0.997 49652.3 1.0 11145 4950 16085 HBL1_DMSO_200M_050219_2,16097 HBL1_DMSO_200M_050219_2,16097, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16098 84.84 763.0 70914.0 25 0 2343.3 + 10200 FQIDSENEALL 11 113 639.8143240719445 1277.614095210689 2 639.8155395388603 MULTI CID FTMS 0 0 0 16085 153974.65625 1.0 0 0.0 13 Unmodified _FQIDSENEALL_ ENSG00000155846|ENST00000309241|PPARGC1B;nc|ENSG00000155846|Q86YN6-2|PPARGC1B;nc|ENSG00000155846|Q86YN6-3|PPARGC1B;nc|ENSG00000155846|Q86YN6-4|PPARGC1B;nc|ENSG00000155846|Q86YN6-5|PPARGC1B;nc|ENSG00000155846|Q86YN6-6|PPARGC1B 43.9818466556824 0.1510575460884947 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}D{[ES]|[DT]|[{I|L}C]}NEA{I|L}{I|L} 11 0 + 52.883 0.0 0.0 4.1392 4.1392 77.097 0.0 0.0 0.0 6.830310536180832 38.27916857927869 6.830310536180832 9.128498242810991 0 0.6989700043360187 0.0 0.6382104921644451 0.9802046884880936 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}D{[ES]|[DT]|[{I|L}C]}NEA{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}D{[ES]|[DT]|[{I|L}C]}GGEA{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}W[SG]{M(Oxidation (M))|F}NEA{I|L}{I|L};[EP]D{I|L}[HQ]NEA{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}W[YQ]NEA{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[NS][SG]{M(Oxidation (M))|F}NEA{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KS][DN]NEA{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[NS][YQ]NEA{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KG][SG]{M(Oxidation (M))|F}NEA{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KG][YQ]NEA{I|L}{I|L} 4.1392;3.4247;2.7983;2.7874;2.7549;2.6533;2.6192;2.607;2.5645;2.5183 +;-;-;-;-;-;-;-;-;- + 622 1 0.997 53136.7 1.0 11146 4950 16085 HBL1_DMSO_200M_050219_2,16098 HBL1_DMSO_200M_050219_2,16098,FQIDSENEALL False True FQIDSENEALL 84.839616 639.81553953886 1356209.875 16085.0 nc|ENSG00000155846|Q86YN6-3|PPARGC1B;;nc|ENSG00000155846|Q86YN6-6|PPARGC1B;;nc|ENSG00000155846|Q86YN6-5|PPARGC1B;;nc|ENSG00000155846|Q86YN6-2|PPARGC1B;;nc|ENSG00000155846|Q86YN6-4|PPARGC1B;;ENSG00000155846|ENST00000309241|PPARGC1B 6.507310390472412 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16099 84.853 765.0 93184.0 25 0 7245.2 + 29986 QTAPEEAFIKL 11 122 623.8375547772386 1245.660556621277 2 623.8371459841728 MULTI CID FTMS 0 0 0 16085 157476.15625 0.5952828269631183 1 -0.192352294921875 14 Unmodified _QTAPEEAFIKL_ ENSG00000196659|ENST00000408939|TTC30B;ENSG00000197557|ENST00000355689|TTC30A 35.61225514009592 0.279986979807413 4 [EP]EA{M(Oxidation (M))|F}{I|L}A 7 5 32.73 0.0 0.0 2.6275 0.0 0.0 0.0 485.2789397602021 485.2789397602021 -1.2333578188004068 0.0 -1.2333578188004068 0.0 0 0.0 0.8239087409443188 0.0 0.0 [EP]EA{M(Oxidation (M))|F}{I|L}A 2.6275 - 703 1 0.997 56594.7 1.0 11147 4950 16085 HBL1_DMSO_200M_050219_2,16099 HBL1_DMSO_200M_050219_2,16099,QTAPEEAFIKL False True QTAPEEAFIKL 84.852862 623.837145984173 2742192.5 16085.0 ENSG00000196659|ENST00000408939|TTC30B;;ENSG00000197557|ENST00000355689|TTC30A 6.7508595784505205 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16100 84.868 800.0 224650.0 25 0 20731.0 -1 0 121 955.5256485397514 1909.036744146303 2 955.5248901247978 MULTI CID FTMS 0 0 0 16085 136975.9375 1.0 0 0.0 15 4 [Q{I|L}]VGD{I|L}VT 8 -1 39.832 0.0 0.0 2.0865 0.0 0.0 0.0 1080.5513061490003 1080.5513061490003 24.794802332746457 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.8391368308784531 0.8945990182825423 [Q{I|L}]VGD{I|L}VT 2.0865 - 9061 1 0.997 120100.6 0.9700000286102296 11148 4950 16085 HBL1_DMSO_200M_050219_2,16100 HBL1_DMSO_200M_050219_2,16100, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16101 84.874 358.0 287780.0 25 0 34614.0 + 15142 INTLTCRF 8 125 323.1729535426735 966.4970312282204 3 323.1726257205009 MULTI CID FTMS 0 0 0 16085 138998.859375 1.0 0 0.0 16 Unmodified _INTLTCRF_ REV__ENSG00000138802|ENST00000265175|SEC24B;REV__nc|ENSG00000138802|O95487-2|SEC24B;REV__nc|ENSG00000138802|O95487-3|SEC24B 8.593279151180031 0.7721714526254883 4 V 1 -1 10.969 0.0 0.0 1.1349 0.0 0.0 849.4176682905237 0.0 849.4176682905237 0.0 -4.520534381044499 -4.520534381044499 0.0 0 0.0 0.0 0.0 0.0 V 1.1349 - 69 + 1 0.997 84311.7 1.0 11149 4950 16085 HBL1_DMSO_200M_050219_2,16101 HBL1_DMSO_200M_050219_2,16101,INTLTCRF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16102 84.888 794.0 170580.0 25 0 14373.0 + 18623 LAFEEEFGRV 10 137 598.8014857283349 1195.5884185234695 2 598.8010742068291 MULTI CID FTMS 0 0 0 16085 135331.421875 0.0725835017604988 3 -0.3921051025390625 17 Unmodified _LAFEEEFGRV_ ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32689659-32696621:+|nuORF 47.594388314883695 0.0942698883389255 4 {I|L}A{M(Oxidation (M))|F}EEE{M(Oxidation (M))|F}{[NV]|[RG]}V 10 0 + 81.646 0.0 0.0 6.8289 6.8289 92.093 0.0 0.0 0.0 67.39812498888905 3.677325524044136 3.677325524044136 17.49878293893218 0 0.9802046884880938 1.6989700043360187 1.024227503252014 0.2302046884880938 + + {I|L}A{M(Oxidation (M))|F}EEE{M(Oxidation (M))|F}{[NV]|[RG]}V;{I|L}A{M(Oxidation (M))|F}EE{[{M(Oxidation (M))|F}C]|[YS]}[KP]{I|L};{I|L}A{M(Oxidation (M))|F}E{M(Oxidation (M))|F}Q{NN|[MP]|[D{I|L}]|[EV]}T{I|L};{I|L}A{M(Oxidation (M))|F}E{[NV]|[RG]}HHMV;{I|L}A{M(Oxidation (M))|F}E{M(Oxidation (M))|F}Q{[QN]|[E{I|L}]|[KN]}S{I|L};{I|L}A{M(Oxidation (M))|F}E{M(Oxidation (M))|F}Q{[QN]|[E{I|L}]|[KN]}TV;{I|L}A{M(Oxidation (M))|F}E{M(Oxidation (M))|F}[EC][KP]{I|L};{I|L}A{M(Oxidation (M))|F}H{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}{[NV]|[RG]}V;{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}EQ{NN|[MP]|[D{I|L}]|[EV]}T{I|L};{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}[HC][KT]MV 6.8289;5.3653;4.9962;4.9657;4.7826;4.7372;4.7189;4.6329;4.6185;4.4621 +;-;-;-;-;-;-;-;-;- + 1618 + 1 0.997 102841.9 1.0 11150 4950 16085 HBL1_DMSO_200M_050219_2,16102 HBL1_DMSO_200M_050219_2,16102,LAFEEEFGRV True True LAFEEEFGRV 84.888064 598.801074206829 37253028.0 16085.0 ENSG00000084623|ENST00000677711|EIF3I;;ENST00000474371.1_1_1:32689659-32696621:+|nuORF 6.599757830301921 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16103 84.903 800.0 169440.0 25 0 27892.0 18795 LAPPWTSL 8 132 442.747329290556 0 442.6012451052666 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _LAPPWTSL_ ENST00000399417.3_1_X:106595227-106595875:-|nuORF 40.44857923139169 0.1366842323899322 4 A{I|L}SG[NG]DG 8 8 28.964 0.0 0.0 3.2784 0.0 0.0 113.0848552590432 96.08261285953358 209.1674681185768 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.8252574989159953 0.0 A{I|L}SG[NG]DG 3.2784 - 349 + 1 0.997 114851.5 0.7900000214576721 11151 4950 16085 HBL1_DMSO_200M_050219_2,16103 HBL1_DMSO_200M_050219_2,16103,LAPPWTSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16104 84.917 800.0 217700.0 25 0 25519.0 + 941 AFIQQNISF 9 186 534.2796285686283 1066.5447042040564 2 534.2807494997978 MULTI CID FTMS 0 0 0 16085 118801.078125 1.0 0 0.0 19 Unmodified _AFIQQNISF_ ENSG00000110446|ENST00000227880|SLC15A3;ENST00000540272.1_1_11:60711109-60714230:-|nuORF 23.1484247019978 0.2366544122328345 4 NKTNV[MT]{I|L}{M(Oxidation (M))|F} 9 8 + 24.86 0.0 0.0 2.3309 2.3309 61.969 0.0 0.0 0.0 1.0712315445994849 1.0712315445994849 1.0712315445994849 0.9691001300805624 0 0.1549471895720985 0.0 0.0 0.0 NKTNV[MT]{I|L}{M(Oxidation (M))|F};NKTNV{I|L}[MT]{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}PWVN{I|L}[DP];{[ET]|[MV]}{I|L}NV[MT]{I|L}{M(Oxidation (M))|F};{[ET]|[MV]}{I|L}NV{I|L}[MT]{M(Oxidation (M))|F};NKTNV[MT]{M(Oxidation (M))|F}{I|L};[{I|L}P]NWVN{I|L}[DP];{[ET]|[MV]}{I|L}NV[MT]{M(Oxidation (M))|F}{I|L};NKWA{I|L}G[MT]{M(Oxidation (M))|F};NP[{M(Oxidation (M))|F}V]V[MT]{I|L}{M(Oxidation (M))|F} 2.3309;2.2401;2.2305;2.1856;2.0948;2.0487;2.0487;1.9034;1.6756;1.6212 -;-;-;-;-;-;-;-;-;- 2901 + 1 0.997 142575.4 0.9300000071525574 11152 4950 16085 HBL1_DMSO_200M_050219_2,16104 HBL1_DMSO_200M_050219_2,16104,AFIQQNISF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16105 84.931 800.0 62543.0 25 0 4593.7 -1 0 86 665.0043297869408 0 665.3392822146416 PEAK CID FTMS 0 0 0 16085 49217.60546875 0.5567412505194164 1 -0.192352294921875 20 4 P{M(Oxidation (M))|F} 2 -1 10.969 0.0 0.0 0.82599 0.0 0.0 112.39336400360057 968.4629750226686 1080.856339026269 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F} 0.82599 - 37 + 1 0.997 49283.6 0.9100000262260436 11153 4950 16085 HBL1_DMSO_200M_050219_2,16105 HBL1_DMSO_200M_050219_2,16105, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16107 84.935 6.5 6151800.0 25 0 908290.0 + 12868 GVVPQLVKL 9 53 476.8133558689311 951.6121588046622 2 476.8135558962822 MULTI CID FTMS 0 0 0 16106 5384970.0 0.1704992429284847 2 -0.1997528076171875 1 Unmodified _GVVPQLVKL_ ENSG00000182481|ENST00000330459|KPNA2 23.1484247019978 0.2366544122328345 4 [VG]V 3 6 29.437 0.0 0.0 3.0934 0.0 0.0 0.0 693.4301269045246 693.4301269045246 9.604093769761874 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + [VG]V 3.0934 + + 51 1 0.996 37357.4 1.0 11154 4951 16106 HBL1_DMSO_200M_050219_2,16107 HBL1_DMSO_200M_050219_2,16107,GVVPQLVKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16108 84.936 8.4 3912200.0 25 0 424940.0 + 43337 DAFRTLGL 8 60 446.7480171008664 891.4814812685329 2 446.7482482790947 MULTI CID FTMS 0 0 0 16106 4741789.0 0.2904662552259606 1 -0.054168701171875 2 Unmodified _WLYGALGL_ chr12:8604892-8605215|31|16.84|0.02|9.9|-|ENST00000537228|AICDA,AICDA;nc|ENSG00000111732|Q9GZX7-2|AICDA;ENSG00000111732|ENST00000229335|AICDA;ENST00000545576.1_1_12:8756882-8757648:-|nuORF 24.20995872069341 0.5349487244130675 4 {[DA]|[EG]}{M(Oxidation (M))|F} 3 7 33.952 0.0 0.0 3.8085 0.0 0.0 0.0 555.3277379353659 555.3277379353659 -1.7486502786740488 0.0 -1.7486502786740488 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F} 3.8085 - 35 + 1 0.996 33336.0 1.0 11155 4951 16106 HBL1_DMSO_200M_050219_2,16108 HBL1_DMSO_200M_050219_2,16108,WLYGALGL False False DAFRTLGL 84.936292 446.748248279095 228210752.0 16106.0 chr12:8604892-8605215|31|16.84|0.02|9.9|-|ENST00000537228|AICDA,AICDA;;nc|ENSG00000111732|Q9GZX7-2|AICDA;;ENSG00000111732|ENST00000229335|AICDA;;ENST00000545576.1_1_12:8756882-8757648:-|nuORF 5.823649565378825 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16109 84.937 10.0 4053200.0 25 0 541410.0 -1 ALMAAPLSL 9 69 451.75274496202985 901.4909369908596 2 451.7528259158134 MULTI CID FTMS 0 0 0 16106 4695755.0 0.3615617201349336 36 -4.027374267578125 3 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 32.116972079565 0.1225432171549407 4 [{I|L}A]{M(Oxidation (M))|F}PAS 6 -1 49.13 0.0 0.0 5.4498 0.0 0.0 0.0 312.1929993290035 312.1929993290035 30.18954998148708 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS 5.4498 - 115 1 0.996 39065.6 1.0 11156 4951 16106 HBL1_DMSO_200M_050219_2,16109 HBL1_DMSO_200M_050219_2,16109,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16110 84.939 22.0 2689200.0 25 0 331400.0 + 41951 VQIGDIVTV 9 81 472.2771187762335 942.5396846192672 2 472.2768737673759 MULTI CID FTMS 0 0 0 16106 2617189.75 0.6252939588368034 1 -0.054168701171875 4 Unmodified _VQIGDIVTV_ ENSG00000142534|ENST00000270625|RPS11 37.97399986684836 0.0865783450051559 4 {[TV]|[{I|L}S]}[PS]Q{I|L} 6 7 33.803 0.0 0.0 3.5863 0.0 0.0 0.0 314.1728970175146 314.1728970175146 13.652340397648857 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.066901560044258 0.0 {[TV]|[{I|L}S]}[PS]Q{I|L} 3.5863 - 560 1 0.996 53169.6 1.0 11157 4951 16106 HBL1_DMSO_200M_050219_2,16110 HBL1_DMSO_200M_050219_2,16110,VQIGDIVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16111 84.94 21.0 2741700.0 25 0 368060.0 -1 EGLSRGMCIL 10 70 568.2827052596912 1134.5508575861822 2 568.2832519412041 MULTI CID FTMS 0 0 0 16106 2307095.75 1.0 0 0.0 5 Carbamidomethyl (C) _EGLSRGMC(Carbamidomethyl (C))IL_ ENST00000552542.5_1_12:113682192-113682351:+|nuORF 21.53697664764585 0.484802182336468 4 {[DA]|[EG]}{I|L}S 4 -1 45.93 0.0 0.0 4.0483 0.0 0.0 0.0 745.3514498346311 745.3514498346311 20.49681237692305 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.4247425010840047 0.0 {[DA]|[EG]}{I|L}S 4.0483 + + 55 + 1 0.996 54049.9 1.0 11158 4951 16106 HBL1_DMSO_200M_050219_2,16111 HBL1_DMSO_200M_050219_2,16111,EGLSRGMCIL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16112 84.941 27.0 2656600.0 25 0 367240.0 + 42847 VVLEEIPKL 9 65 520.3232724868012 1038.6319920404023 2 520.3239013552666 MULTI CID FTMS 0 0 0 16106 2042367.375 0.9971037564204164 -1 0.192352294921875 6 Unmodified _VVLEEIPKL_ ENSG00000116266|ENST00000370008|STXBP3 38.17557092003332 0.0854718145212029 4 VV{I|L}EE{I|L}P[K{I|L}] 9 0 + 83.351 0.0 0.0 8.0251 8.0251 97.617 0.0 0.0 0.0 56.18440000316717 4.137342758552691 4.137342758552691 83.35138771613167 0 0.75 2.0 0.4247425010840047 0.0 + + VV{I|L}EE{I|L}P[K{I|L}] 8.0251 + + 164 + 1 0.996 61641.2 1.0 11159 4951 16106 HBL1_DMSO_200M_050219_2,16112 HBL1_DMSO_200M_050219_2,16112,VVLEEIPKL True True VVLEEIPKL 84.941009 520.323901355267 43984380.0 16106.0 ENSG00000116266|ENST00000370008|STXBP3 5.465507348378499 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16113 84.942 23.0 2347900.0 25 0 387740.0 + 35842 SVLDQKILL 9 76 514.8211193496473 1027.6276857660946 2 514.8215209841728 MULTI CID FTMS 0 0 0 16106 2034650.875 0.971979669957474 -1 0.192352294921875 7 Unmodified _SVLDQKILL_ ENSG00000142207|ENST00000382751|URB1 43.77239144664712 0.0547478964384323 4 [VS]{I|L}DQK{I|L}{I|L}{I|L} 9 0 + 64.988 0.0 0.0 6.3241 6.3241 85.414 0.0 0.0 0.0 8.58857830256703 8.58857830256703 8.58857830256703 8.58857830256703 0 1.6677353201839438 2.0 0.5 0.0 + + [VS]{I|L}DQK{I|L}{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}{I|L}[VS]{I|L}{I|L};[VS]{I|L}D[AG]K{I|L}{I|L}{I|L};[VS]{[QG]|[NA]}{I|L}{I|L}[VS]{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}[VS]{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QK{I|L}[VS]{I|L}{I|L};[VS]{[QG]|[NA]}{I|L}[VS]{I|L}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}K{I|L}[VS]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QK[VS]{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]K{I|L}[VS]{I|L}{I|L} 6.3241;5.4883;5.428;4.9037;4.7821;4.5114;4.1974;3.8312;3.8051;3.6153 +;-;-;-;-;-;-;-;-;- + 492 + 1 0.996 46057.7 1.0 11160 4951 16106 HBL1_DMSO_200M_050219_2,16113 HBL1_DMSO_200M_050219_2,16113,SVLDQKILL True True SVLDQKILL 84.942186 514.821520984173 37405300.0 16106.0 ENSG00000142207|ENST00000382751|URB1 3.8756725788116455 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16114 84.943 47.0 1235800.0 25 0 179040.0 + 6163 DTATLLLKL 9 82 494.3081521730172 986.6017514128343 2 494.3080322146416 MULTI CID FTMS 0 0 0 16106 1289995.5 0.2377830907430443 1 -0.054168701171875 8 Unmodified _DTATLLLKL_ REV__ENSG00000250120|ENST00000307360|PCDHA10;REV__nc|ENSG00000250120|Q9Y5I2-2|PCDHA10;REV__nc|ENSG00000250120|Q9Y5I2-3|PCDHA10 78.14939416004806 0.0179651292570206 4 TASE{I|L}{I|L}{I|L}K{I|L} 9 -1 + 94.95 0.0 0.0 9.6239 9.6239 84.384 0.0 0.0 0.0 34.96244009238126 2.3044892137827446 2.3044892137827446 2.3044892137827446 0 1.8001648626366045 2.0 0.0 0.2614393726401688 TASE{I|L}{I|L}{I|L}K{I|L};TASE{I|L}{I|L}{I|L}{I|L}K 9.6239;9.3904 -;- 257 + 1 0.996 48208.6 1.0 11161 4951 16106 HBL1_DMSO_200M_050219_2,16114 HBL1_DMSO_200M_050219_2,16114,DTATLLLKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16115 84.945 40.0 1356200.0 25 0 112040.0 + 16073 ITPDEFHFV 9 69 552.7718179658842 1103.5290829985684 2 552.7719604372978 MULTI CID FTMS 0 0 0 16106 1130073.25 0.7023044970054558 -2 0.3206710815429687 9 Unmodified _ITPDEFHFV_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 21.74664581756881 0.2544899275067181 4 [{I|L}T]V[YV]DMY 8 7 41.604 0.0 0.0 3.7701 0.0 0.0 0.0 116.0511721246703 116.0511721246703 -3.4678748622465605 0.0 -3.4678748622465605 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 [{I|L}T]V[YV]DMY 3.7701 - 163 + 1 0.996 50219.8 1.0 11162 4951 16106 HBL1_DMSO_200M_050219_2,16115 HBL1_DMSO_200M_050219_2,16115,ITPDEFHFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16116 84.947 84.0 720180.0 25 0 95931.0 + 19654 LGGVVSLIVG 10 84 457.28956277582046 912.5645726184408 2 457.2895080447197 MULTI CID FTMS 0 0 0 16106 610593.0 0.2082041952125955 -2 0.3206710815429687 10 Unmodified _LGGVVSLIVG_ REV__ENSG00000103249|ENST00000382745|CLCN7;REV__ENST00000563822.1_1_16:1505719-1509320:-|nuORF;REV__ENST00000564968.1_1_16:1507514-1509320:-|nuORF;REV__nc|ENSG00000103249|P51798-2|CLCN7 44.40701690623563 0.1129771813061863 4 {[TV]|[{I|L}S]}VNV{I|L} 6 -1 46.406 0.0 0.0 5.0852 0.0 0.0 0.0 284.16151186462645 284.16151186462645 16.624628150806373 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.4802046884880935 0.0 {[TV]|[{I|L}S]}VNV{I|L} 5.0852 - 901 1 0.996 54865.4 1.0 11163 4951 16106 HBL1_DMSO_200M_050219_2,16116 HBL1_DMSO_200M_050219_2,16116,LGGVVSLIVG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16117 84.949 114.0 999510.0 25 0 128190.0 + 18318 KVLDLRINL 9 119 542.3480534694463 1082.6815540056923 2 542.3484374880791 MULTI CID FTMS 0 0 0 16106 551559.8125 1.0 0 0.0 11 Unmodified _KVLDLRINL_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 27.088373467376528 0.1865245257266215 4 KV{I|L}D{I|L}[R{I|L}]AGV 10 3 + 67.621 0.0 0.0 6.2457 6.2457 75.886 0.0 0.0 0.0 45.21816626477025 4.305879070655607 4.305879070655607 1.660006443871879 0 1.7302046884880935 1.154901959985743 0.0 0.2742275032520141 KV{I|L}D{I|L}[R{I|L}]AGV;KV{I|L}D{I|L}[R{I|L}]QV;KV{I|L}D{I|L}[R{I|L}]N{I|L};KV{I|L}D{I|L}[R{I|L}]GG{I|L};K{I|L}VD{I|L}[R{I|L}]AGV;K{I|L}VD{I|L}[R{I|L}]QV;K{I|L}VD{I|L}[R{I|L}]N{I|L};K{I|L}VD{I|L}[R{I|L}]GG{I|L} 6.2457;6.0924;5.5569;4.5344;4.3867;4.2333;3.6978;2.6754 -;-;+;-;-;-;-;- + 212 + 1 0.996 95705.3 1.0 11164 4951 16106 HBL1_DMSO_200M_050219_2,16117 HBL1_DMSO_200M_050219_2,16117,KVLDLRINL False True KVLDLRINL 84.948896 542.348437488079 4580328.5 16106.0 nc|ENSG00000129003|Q709C8-3|VPS13C;;ENSG00000129003|ENST00000644861|VPS13C;;nc|ENSG00000129003|Q709C8-4|VPS13C;;nc|ENSG00000129003|Q709C8-2|VPS13C 3.5501562356948853 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16118 84.951 79.0 726700.0 25 0 106520.0 18733 LALEGGHDL 9 75 462.744003502894 0 462.7438232302666 PEAK CID FTMS 0 0 0 16106 556046.625 0.2123703673078651 10 -1.1522445678710938 12 Unmodified _LALEGGHDL_ ENSG00000048052|ENST00000686413|HDAC9;ENSG00000061273|ENST00000080059|HDAC7;ENSG00000068024|ENST00000543185|HDAC4;ENSG00000108840|ENST00000682912|HDAC5;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;ENST00000490851.5_1_7:18832955-19035682:+|nuORF;ENST00000494800.1_1_2:239977015-240002822:-|nuORF;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000068024|P56524-2|HDAC4;nc|ENSG00000068024|P56524|HDAC4;nc|ENSG00000108840|Q9UQL6-2|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5 12.531546534597751 0.2832320739326029 4 P{I|L} 2 8 13.711 0.0 0.0 1.4848 0.0 0.0 184.12086199775143 526.1888521783811 710.3097141761325 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L} 1.4848 - 25 + 1 0.996 52875.3 1.0 11165 4951 16106 HBL1_DMSO_200M_050219_2,16118 HBL1_DMSO_200M_050219_2,16118,LALEGGHDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16119 84.952 59.0 1678800.0 25 0 278910.0 + 39987 VGAWHCVPL 9 90 491.25028472092265 980.4860165086452 2 491.2502929568291 MULTI CID FTMS 0 0 0 16106 501344.8125 0.4223574715702398 -1 0.192352294921875 13 Unmodified _VGAWHCVPL_ REV__ENST00000235090.9_1_1:111984691-111985337:-|nuORF 20.871210003555333 0.2717241269066626 4 V{M(Oxidation (M))|F}V{[YD]|[{M(Oxidation (M))|F}M]}EP{I|L} 8 -1 + 55.131 0.0 0.0 5.6228 5.6228 75.195 0.0 0.0 0.0 25.255762612236907 13.359790849763655 13.359790849763655 2.5578094971178444 0 0.0 1.5228787452803376 0.3807196863200844 0.0 V{M(Oxidation (M))|F}V{[YD]|[{M(Oxidation (M))|F}M]}EP{I|L};V{M(Oxidation (M))|F}[KQ]{M(Oxidation (M))|F}CP{I|L};VTA[KC]{M(Oxidation (M))|F}CP{I|L};VQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}CP{I|L};VQ[KC]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{I|L};V[AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}CP{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HN]{[{M(Oxidation (M))|F}H]|[RQ]}TV;[EP][TP][NP]VEV 5.6228;5.3619;3.9367;3.7104;2.8987;2.7658;1.5299;0.72861 -;-;-;-;-;-;-;- 320 + 1 0.996 80915.6 1.0 11166 4951 16106 HBL1_DMSO_200M_050219_2,16119 HBL1_DMSO_200M_050219_2,16119,VGAWHCVPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16120 84.957 231.0 454880.0 25 0 76248.0 -1 0 77 657.3447482168516 1969.0124152507549 3 657.6793701052666 MULTI CID FTMS 0 0 0 16106 442347.46875 1.0 0 0.0 14 4 [{I|L}T][NP]N{I|L}{I|L}GS 9 -1 56.929 0.0 0.0 2.8912 0.0 0.0 0.0 1056.4970186822875 1056.4970186822875 31.92348741261036 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.4247425010840047 [{I|L}T][NP]N{I|L}{I|L}GS 2.8912 - 362 + 1 0.996 85197.1 1.0 11167 4951 16106 HBL1_DMSO_200M_050219_2,16120 HBL1_DMSO_200M_050219_2,16120, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16121 84.958 52.0 598610.0 25 0 60882.0 + 25693 NIANHFFTV 9 67 531.772520201373 1061.530487469546 2 531.7723876833916 MULTI CID FTMS 0 0 0 16106 410063.875 0.9034353907131532 1 -0.054168701171875 15 Unmodified _NIANHFFTV_ ENSG00000117143|ENST00000367925|UAP1;nc|ENSG00000117143|Q16222-2|UAP1;nc|ENSG00000117143|Q16222-3|UAP1 10.823927491677226 0.5436922275383211 4 S{I|L} 2 8 14.693 0.0 0.0 1.3841 0.0 0.0 843.4033950396616 0.0 843.4033950396616 0.0 0.7133375178436552 0.0 0.0 0 0.0 0.0 0.0 0.0 S{I|L} 1.3841 - 27 + 1 0.996 34206.5 1.0 11168 4951 16106 HBL1_DMSO_200M_050219_2,16121 HBL1_DMSO_200M_050219_2,16121,NIANHFFTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16122 84.96 108.0 667120.0 25 0 176540.0 + 30777 RIDGVSLLV 9 85 486.2971070340452 0 486.2960388064384 PEAK CID FTMS 0 0 0 16106 420599.59375 1.0 0 0.0 16 Unmodified _RIDGVSLLV_ ENSG00000146223|ENST00000493763|RPL7L1;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 28.49450938151212 0.124065572374239 4 {I|L}{I|L}SVGD 6 7 31.363 0.0 0.0 3.2314 0.0 0.0 117.07485264055283 266.1626375787719 383.2374902193248 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 {I|L}{I|L}SVGD 3.2314 - 103 + 1 0.996 63721.5 1.0 11169 4951 16106 HBL1_DMSO_200M_050219_2,16122 HBL1_DMSO_200M_050219_2,16122,RIDGVSLLV True True RIDGVSLLV 84.960159 486.296038806438 1916956.375 16106.0 ENST00000397415.7_1_6:42848808-42854199:+|nuORF;;ENSG00000146223|ENST00000493763|RPL7L1;;ENST00000530523.1_1_8:42580956-42581139:-|nuORF;;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;;nc|ENSG00000146223|Q6DKI1-2|RPL7L1 6.531510829925537 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16123 84.965 238.0 416970.0 25 0 18504.0 -1 0 106 1037.9743042306309 2073.934055528062 2 1038.476611316204 MULTI CID FTMS 0 0 0 16106 358422.0625 1.0 0 0.0 17 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[NS]H[WK]TS{I|L}DG 13 -1 46.917 0.0 0.0 2.2622 0.0 0.0 0.0 654.251709452641 654.251709452641 21.053304081495657 0.0 0.0 0.0 0 0.2742275032520141 1.3010299956639813 0.6989700043360187 0.3252574989159953 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G[NS]H[WK]TS{I|L}DG 2.2622 - 4405 1 0.996 69348.1 1.0 11170 4951 16106 HBL1_DMSO_200M_050219_2,16123 HBL1_DMSO_200M_050219_2,16123, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16124 84.968 178.0 384540.0 25 0 43118.0 + 22551 LPWPFRNKV 9 70 386.2259835217569 1155.6561211654707 3 386.2259399294853 MULTI CID FTMS 0 0 0 16106 362743.59375 0.4406565458127284 6 -0.711883544921875 18 Unmodified _LPWPFRNKV_ ENSG00000056558|ENST00000373887|TRAF1;nc|ENSG00000056558|Q13077-2|TRAF1 15.248480904072842 0.4239247793462406 4 {I|L}PWV 4 5 45.962 0.0 0.0 3.9771 0.0 0.0 0.0 657.3506948176483 657.3506948176483 28.51464731531564 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 0.0 0.0 {I|L}PWV 3.9771 - 33 + 1 0.996 63857.4 1.0 11171 4951 16106 HBL1_DMSO_200M_050219_2,16124 HBL1_DMSO_200M_050219_2,16124,LPWPFRNKV False True LPWPFRNKV 84.968109 386.225939929485 53335862.5 16106.0 nc|ENSG00000056558|Q13077-2|TRAF1;;ENSG00000056558|ENST00000373887|TRAF1 4.96407413482666 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16125 84.972 228.0 757820.0 25 0 54313.0 + 16864 KIFDEILVNA 10 159 581.3297532783104 1160.6449536234206 2 581.3297607302666 MULTI CID FTMS 0 0 0 16106 344768.53125 0.0391235803215847 -3 0.4340972900390625 19 Unmodified _KIFDEILVNA_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant 59.36838082759317 0.0382430275470746 4 {[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}K{I|L}{I|L}VNA 10 4 + 62.797 0.0 0.0 5.4106 5.4106 70.517 0.0 0.0 0.0 0.5238806945968832 7.316179027295426 0.5238806945968832 0.5238806945968832 0 1.0172203223519531 0.4089353929735008 1.392159058960253 0.0 {[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}K{I|L}{I|L}VNA;{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}K{I|L}{I|L}VNA;[K{I|L}]{M(Oxidation (M))|F}DE{I|L}{I|L}VNA;{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}{I|L}K{I|L}VNA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L}K{I|L}{I|L}VNA;{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}{I|L}K{I|L}VNA;[{I|L}V][YQ]E{I|L}{I|L}VNA;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EK{I|L}{I|L}VNA;[YV][Q{I|L}]E{I|L}{I|L}VNA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F}K{I|L}{I|L}VNA 5.4106;5.3654;5.2194;5.0386;5.0142;4.9934;4.8488;4.8467;4.7989;4.7548 -;-;+;-;-;-;-;-;-;- + 6526 1 0.996 135520.0 1.0 11172 4951 16106 HBL1_DMSO_200M_050219_2,16125 HBL1_DMSO_200M_050219_2,16125,KIFDEILVNA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16126 84.985 717.0 274880.0 25 0 18130.0 27088 PFACKSAL 8 144 418.71869385140826 835.4228347696165 2 418.7185851931572 MULTI CID FTMS 0 0 0 16106 318191.6875 0.6904341412002641 1 -0.054168701171875 20 Unmodified _PFACKSAL_ ENSG00000256463|ENST00000537592|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3 11.114462752807354 0.7467182956244686 4 [{M(Oxidation (M))|F}E]NWK{I|L} 6 5 + 33.377 0.0 0.0 3.9952 3.9952 68.781 0.0 0.0 0.0 6.478174818886373 2.6884531229258 2.6884531229258 2.6884531229258 0 0.0 0.0 0.0 0.6421590589602533 [{M(Oxidation (M))|F}E]NWK{I|L};[{M(Oxidation (M))|F}E]NW{I|L}K;[{M(Oxidation (M))|F}E]GGWK{I|L};[{M(Oxidation (M))|F}E]N{I|L}WK;[{M(Oxidation (M))|F}E]GGW{I|L}K;[{M(Oxidation (M))|F}E]GG{I|L}WK;[WK]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}Q 3.9952;3.6734;2.8676;2.5785;2.5458;1.451;0.015831 -;-;-;-;-;-;- 198 + 1 0.996 154810.2 1.0 11173 4951 16106 HBL1_DMSO_200M_050219_2,16126 HBL1_DMSO_200M_050219_2,16126,PFACKSAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16128 84.999 669.0 434480.0 25 0 37501.0 + 9650 FLPDAQCYPC 10 179 578.7452621045022 1155.4759712758043 2 578.7459594607353 MULTI CID FTMS 0 0 0 16127 402656.1875 0.7884099014998391 -1 0.054168701171875 1 Unmodified _FLPDAQCYPC_ REV__ENST00000267116.7_1_12:56636474-56636675:-|nuORF 24.020572477871973 0.4289996903560794 4 NVVDP{[QN]|[E{I|L}]|[KN]} 7 -1 39.662 0.0 0.0 3.4325 0.0 0.0 371.064153332128 0.0 371.064153332128 0.0 6.147676654898604 0.0 0.0 0 0.3807196863200844 0.0 0.0 1.6936726795685342 NVVDP{[QN]|[E{I|L}]|[KN]} 3.4325 - 1594 1 0.996 217867.4 1.0 11174 4952 16127 HBL1_DMSO_200M_050219_2,16128 HBL1_DMSO_200M_050219_2,16128,FLPDAQCYPC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16129 85.0 40.0 710060.0 25 0 104900.0 + -1 ALLDFTCT 8 63 314.15348691492704 939.4386313449812 3 314.1531249880791 MULTI CID FTMS 0 0 0 -1 0 2 Carbamidomethyl (C) _ALLDFTC(Carbamidomethyl (C))T_ REV__ENST00000219478.10_1_16:4800958-4801270:-|nuORF 6.723162845929126 0.7835230281555235 4 [{I|L}A]{I|L}[WC(Carbamidomethyl (C))]{[YD]|[{M(Oxidation (M))|F}M]} 7 -1 + 33.256 0.0 0.0 3.54 3.54 80.915 0.0 0.0 0.0 26.26628182818699 2.79840696594043 2.79840696594043 33.25598187154718 0 0.0 2.0 0.0 0.0 [{I|L}A]{I|L}[WC(Carbamidomethyl (C))]{[YD]|[{M(Oxidation (M))|F}M]} 3.54 - 13 + 1 0.996 31349.2 1.0 11175 4952 16127 HBL1_DMSO_200M_050219_2,16129 HBL1_DMSO_200M_050219_2,16129,ALLDFTCT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16130 85.002 96.0 510800.0 25 0 69335.0 + 21364 LPFPAQPPVV 10 79 532.8093713617271 1063.6041897902542 2 532.8112670779228 MULTI CID FTMS 0 0 0 16127 517473.1875 0.1310609822256903 -8 0.957183837890625 3 Unmodified _LPFPAQPPVV_ ENSG00000139746|ENST00000438737|RBM26;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26 44.40701690623563 0.1129771813061863 4 [{I|L}P][QA]M{I|L}P 7 6 42.095 0.0 0.0 3.9578 0.0 0.0 0.0 310.1736798057295 310.1736798057295 26.610688275226053 0.0 0.0 0.0 0 0.8807196863200843 1.3010299956639813 0.0 0.7302046884880937 [{I|L}P][QA]M{I|L}P 3.9578 - 176 1 0.996 51192.1 1.0 11176 4952 16127 HBL1_DMSO_200M_050219_2,16130 HBL1_DMSO_200M_050219_2,16130,LPFPAQPPVV True True LPFPAQPPVV 85.001961 532.811267077923 12840488.0 16127.0 nc|ENSG00000139746|Q5T8P6-3|RBM26;;ENSG00000139746|ENST00000438737|RBM26;;nc|ENSG00000139746|Q5T8P6-2|RBM26 7.002691268920898 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16131 85.004 81.0 594660.0 25 0 131750.0 + 42878 VVMDLYEL 8 72 327.83607331855137 980.486390555854 3 327.8357726931572 MULTI CID FTMS 0 0 0 16127 437193.15625 1.0 0 0.0 4 Unmodified _VVMDLYEL_ REV__ENSG00000160870|ENST00000336374|CYP3A7;REV__ENSG00000282301|ENST00000620220|CYP3A7-CYP3A51P;REV__nc|ENSG00000160870|P24462-2|CYP3A7 6.2057823575117 0.7866635192979977 4 VV 2 -1 20.969 0.0 0.0 2.1386 0.0 0.0 0.0 779.3266116584056 779.3266116584056 16.747425010840047 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV 2.1386 + + 15 + 1 0.996 47124.0 1.0 11177 4952 16127 HBL1_DMSO_200M_050219_2,16131 HBL1_DMSO_200M_050219_2,16131,VVMDLYEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16132 85.007 193.0 541710.0 25 0 78592.0 + 42636 VTVKFTAAV 9 112 468.28086558866136 934.5471782441228 2 468.2819396853447 MULTI CID FTMS 0 0 0 16127 437480.28125 0.7134055142005182 -2 0.24652099609375 5 Unmodified _VTVKFTAAV_ REV__ENST00000588547.1_1_17:40060903-40061877:-|nuORF 26.268140514670165 0.1969607489560049 4 VTV{I|L}EY{I|L}V 8 -1 + 69.571 0.0 0.0 7.4444 7.4444 88.012 0.0 0.0 0.0 50.542359562158126 5.859790849763655 5.859790849763655 7.20159303405957 0 1.1435078169319297 2.0 0.0 0.0 VTV{I|L}EY{I|L}V;VTV{I|L}EYV{I|L};VT{I|L}VEY{I|L}V;VT{I|L}VEYV{I|L};{[TV]|[{I|L}S]}V{I|L}YV{[QN]|[E{I|L}]|[KN]};[{I|L}V]S{I|L}YV{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[RK]CAV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VY{I|L}[PA]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[RK]CG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[RK]C(Carbamidomethyl (C)){I|L} 7.4444;6.6738;6.0051;5.2345;4.3923;2.192;1.3759;0.6245;0.6053;0.022586 -;-;-;-;-;-;-;-;-;- 348 + 1 0.996 83899.3 1.0 11178 4952 16127 HBL1_DMSO_200M_050219_2,16132 HBL1_DMSO_200M_050219_2,16132,VTVKFTAAV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16133 85.01 144.0 552180.0 25 0 59535.0 + 9995 FPITAIREI 9 97 530.31363743094 1058.61272192868 2 530.3140746951103 MULTI CID FTMS 0 0 0 16127 352348.75 0.7265133331829853 -1 0.054168701171875 6 Unmodified _FPITALREI_ nc|ENSG00000167258|Q9NYV4-2|CDK12;ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000065883|Q14004-2|CDK13;nc|ENSG00000167258|Q9NYV4-3|CDK12;ENSG00000065883|ENST00000181839|CDK13 43.77239144664712 0.0547478964384323 4 {M(Oxidation (M))|F}P{I|L}TA{I|L}WV{I|L} 9 2 + 65.927 0.0 0.0 6.2276 6.2276 87.615 0.0 0.0 0.0 10.150312510170778 9.700367766225568 9.700367766225568 9.700367766225568 0 0.805462187404089 0.0 0.7059771852360797 0.0 {M(Oxidation (M))|F}P{I|L}TA{I|L}WV{I|L};{M(Oxidation (M))|F}P{I|L}TA{I|L}W{I|L}V;[YV][VP]A{I|L}WV{I|L};[YV]{I|L}[PG]{I|L}WV{I|L};[YV][VP]A{I|L}W{I|L}V 6.2276;5.3113;1.1658;0.71514;0.24952 -;-;-;-;- 336 + 1 0.996 71119.5 1.0 11179 4952 16127 HBL1_DMSO_200M_050219_2,16133 HBL1_DMSO_200M_050219_2,16133,FPITALREI True True FPITAIREI 85.010406 530.31407469511 34714060.0 16127.0 nc|ENSG00000167258|Q9NYV4-2|CDK12;;ENSG00000167258|ENST00000447079|CDK12;;nc|ENSG00000065883|Q14004-2|CDK13;;nc|ENSG00000167258|Q9NYV4-3|CDK12;;ENSG00000065883|ENST00000181839|CDK13 5.100058714548747 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16134 85.024 770.0 322510.0 25 0 27590.0 + 38961 TVPEEEEDV 9 181 523.730390957894 1045.446228982588 2 523.7307617068291 MULTI CID FTMS 0 0 0 16127 220488.828125 0.7160930375402582 -3 0.3748397827148437 7 Unmodified _TVPEEEEDV_ ENSG00000266074|ENST00000675386|BAHCC1;nc|ENSG00000266074|Q9P281|BAHCC1 34.10243960390752 0.1078313939113124 4 VT 2 8 34.972 0.0 0.0 3.3452 0.0 0.0 0.0 842.3088095638678 842.3088095638678 15.41921379293585 0.0 0.0 0.0 0 0.25 0.7695510786217261 0.3807196863200844 0.0 VT 3.3452 - 1476 + 1 0.996 198621.1 1.0 11180 4952 16127 HBL1_DMSO_200M_050219_2,16134 HBL1_DMSO_200M_050219_2,16134,TVPEEEEDV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16135 85.03 356.0 234790.0 25 0 18578.0 38036 TPDFYALVAQ 10 120 562.7849290054999 1123.5553050777996 2 562.7849609255791 MULTI CID FTMS 0 0 0 16127 204111.59375 0.8631585749706161 -1 0.054168701171875 8 Unmodified _TPDFYALVAQ_ ENSG00000126453|ENST00000246784|BCL2L12;ENST00000508390.1_1_3:131245302-131245881:+|nuORF;nc|ENSG00000126453|Q9HB09-3|BCL2L12 25.399314129420983 0.3980215340001851 4 [EP]YS{M(Oxidation (M))|F}AQ 7 6 50.463 0.0 0.0 4.4914 0.0 0.0 0.0 298.17617367551105 298.17617367551105 21.13190743340098 0.0 0.0 0.0 0 0.0 0.6989700043360187 1.174742501084005 0.0 [EP]YS{M(Oxidation (M))|F}AQ 4.4914 - 1015 1 0.996 70295.4 1.0 11181 4952 16127 HBL1_DMSO_200M_050219_2,16135 HBL1_DMSO_200M_050219_2,16135,TPDFYALVAQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16136 85.044 800.0 289410.0 25 0 25642.0 + 7420 EGLMTQPRGF 10 185 379.1914229275994 1134.5524393829985 3 379.1913635134697 MULTI CID FTMS 0 0 0 16127 192641.359375 1.0 0 0.0 9 Unmodified _EGLMTQPRGF_ REV__ENSG00000158816|ENST00000289815|VWA5B1;REV__nc|ENSG00000158816|Q5TIE3-4|VWA5B1;REV__nc|ENSG00000158816|Q5TIE3-5|VWA5B1;REV__nc|ENSG00000158816|Q5TIE3|VWA5B1 8.745405648335112 0.6861838735306406 4 {[DA]|[EG]}{I|L} 3 -1 29.582 0.0 0.0 2.6074 0.0 0.0 0.0 832.3813022582514 832.3813022582514 18.322894994802343 0.0 0.0 0.0 0 0.5 2.0 0.0629529932484498 0.0 {[DA]|[EG]}{I|L} 2.6074 + + 406 1 0.996 183253.8 0.800000011920929 11182 4952 16127 HBL1_DMSO_200M_050219_2,16136 HBL1_DMSO_200M_050219_2,16136,EGLMTQPRGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16137 85.057 775.0 255370.0 25 0 20300.0 + 24185 LYYNTITNF 9 180 574.7855384443562 0 574.7851440310478 PEAK CID FTMS 0 0 0 16127 189097.015625 0.8220817451144992 -1 0.054168701171875 10 Unmodified _LYYNTITNF_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 48.345845343767074 0.036192834052621 4 EVACVV 6 9 28.136 0.0 0.0 2.4518 0.0 0.0 132.01106604711237 412.23218384070015 544.2432498878125 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EVACVV 2.4518 - 1295 + 1 0.996 151861.3 1.0 11183 4952 16127 HBL1_DMSO_200M_050219_2,16137 HBL1_DMSO_200M_050219_2,16137,LYYNTITNF True True LYYNTITNF 85.057404 574.785144031048 2051749.25 16127.0 ENSG00000071794|ENST00000310053|HLTF;;nc|ENSG00000071794|Q14527-2|HLTF 5.561036268870036 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16138 85.062 165.0 340560.0 25 0 52331.0 + 20191 IIQEFLSKV 9 101 538.8222073566983 0 538.8217040896416 PEAK CID FTMS 0 0 0 16127 189795.25 0.7493011366934496 5 -0.65771484375 11 Unmodified _LLAGRMFRL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2;chr2:47480871-47482783|15|10.27|0.3|5.09|+|2|MSH2,None|1 24.67388899826682 0.1587009629985955 4 VQE 3 9 26.753 0.0 0.0 2.4871 0.0 0.0 127.10442340304652 589.3371676080686 716.4415910111152 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.3807196863200844 VQE 2.4871 - 104 + 1 0.996 49347.7 1.0 11184 4952 16127 HBL1_DMSO_200M_050219_2,16138 HBL1_DMSO_200M_050219_2,16138,LLAGRMFRL False False IIQEFLSKV 85.061823 538.821704089642 1788856.125 16127.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2;;chr2:47480871-47482783|15|10.27|0.3|5.09|+|2|MSH2,None|1 4.591648022333781 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16139 85.067 283.0 465000.0 25 0 22754.0 16351 IYNECGYD 8 120 488.69142929974686 975.3683056662936 2 488.6914855837822 MULTI CID FTMS 0 0 0 16127 179065.828125 0.5103526631675354 -3 0.3748397827148437 12 Unmodified _IYNECGYD_ ENSG00000164627|ENST00000287152|KIF6;nc|ENSG00000164627|Q6ZMV9-3|KIF6 13.50788311687929 0.7113601687236069 4 [Y{I|L}]NVTV 6 5 23.821 0.0 0.0 2.4423 0.0 0.0 0.0 282.96923275053126 282.96923275053126 2.852124803540626 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.75 [Y{I|L}]NVTV 2.4423 - 312 1 0.996 103676.0 1.0 11185 4952 16127 HBL1_DMSO_200M_050219_2,16139 HBL1_DMSO_200M_050219_2,16139,IYNECGYD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16140 85.07 154.0 406810.0 25 0 88284.0 -1 LCAFITKVKK 10 58 604.3669225088742 1206.7192920845482 2 604.3669311404228 MULTI CID FTMS 0 0 0 16127 172753.5 0.2172939185035387 -2 0.24652099609375 13 Carbamidomethyl (C) _LC(Carbamidomethyl (C))AFITKVKK_ ENSG00000176406|ENST00000696799|RIMS2;nc|ENSG00000176406|Q9UQ26-1|RIMS2;nc|ENSG00000176406|Q9UQ26-2|RIMS2;nc|ENSG00000176406|Q9UQ26-3|RIMS2;nc|ENSG00000176406|Q9UQ26-4|RIMS2;nc|ENSG00000176406|Q9UQ26-5|RIMS2;nc|ENSG00000176406|Q9UQ26-8|RIMS2;nc|ENSG00000176406|Q9UQ26|RIMS2 0.4583401331227399 0.7245164002484112 4 P 1 -1 1.9897 0.0 0.0 0.16489 0.0 0.0 986.5876220179453 120.0508516901 1106.6384737080452 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.16489 - 4 + 1 0.996 48154.6 1.0 11186 4952 16127 HBL1_DMSO_200M_050219_2,16140 HBL1_DMSO_200M_050219_2,16140,LCAFITKVKK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16141 85.074 220.0 307020.0 25 0 54566.0 27542 PKVNPLRRDI 10 81 403.2468556902391 1206.718737670917 3 403.2468139529228 MULTI CID FTMS 0 0 0 16127 165903.328125 0.3637127428513841 -2 0.24652099609375 14 Unmodified _PKVNPLRRDI_ ENST00000268485.7_1_16:71660520-71668122:+|nuORF;ENST00000299952.4_1_16:71660520-71674304:+|nuORF 1.7422754331352035 0.7185774482633845 4 C(Carbamidomethyl (C)) 1 10 1.9897 0.0 0.0 0.16489 0.0 0.0 662.4603281023611 381.20527063541255 1043.6655987377735 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.16489 - 4 + 1 0.996 56479.2 1.0 11187 4952 16127 HBL1_DMSO_200M_050219_2,16141 HBL1_DMSO_200M_050219_2,16141,PKVNPLRRDI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16142 85.076 106.0 520420.0 25 0 53113.0 25775 NIVTVTGISL 10 97 508.8028807159912 1015.5912084987824 2 508.7987853884697 MULTI CID FTMS 0 0 0 16127 174631.8125 0.1321045754625276 9 -1.0980758666992188 15 Unmodified _NIVTVTGISL_ ENSG00000136114|ENST00000258613|THSD1;nc|ENSG00000136114|Q9NS62-2|THSD1 24.020572477871973 0.4289996903560794 4 {[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}CV{I|L} 8 7 + 29.843 0.0 0.0 2.9385 2.9385 68.448 0.0 0.0 0.0 16.74410632329284 3.979400086720375 3.979400086720375 3.979400086720375 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}CV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[WR]{I|L}C{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}[YV]A{I|L}[NP]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YV]A{I|L}[QP]V;{[QV]|[N{I|L}]|[RA]|[KV]}[YV]A[QP]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YV]A[QP]{I|L}V 2.9385;2.5467;1.8167;1.4249;1.3678;0.97593 -;-;-;-;-;- 252 + 1 0.996 46218.5 1.0 11188 4952 16127 HBL1_DMSO_200M_050219_2,16142 HBL1_DMSO_200M_050219_2,16142,NIVTVTGISL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16143 85.09 800.0 129790.0 25 0 10802.0 + -1 SLIDMRGIETV 11 146 616.7591497666679 1231.5037466001356 2 617.8317748904228 MULTI CID FTMS 0 0 0 -1 0 16 2 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))PM(Oxidation (M))KASYTV_ nc|ENSG00000163029|Q96SB8-2|SMC6;ENSG00000163029|ENST00000448223|SMC6 6.2057823575117 0.6979311171683138 4 {[TV]|[{I|L}S]}EWW{I|L}S 7 -1 28.829 0.0 0.0 2.341 0.0 0.0 0.0 327.05299233412205 327.05299233412205 8.11583825354596 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}EWW{I|L}S 2.341 - 975 1 0.996 77731.7 0.8899999856948853 11189 4952 16127 HBL1_DMSO_200M_050219_2,16143 HBL1_DMSO_200M_050219_2,16143,CCPMKASYTV False False SLIDMRGIETV 85.090314 617.831774890423 1647416.125 16127.0 nc|ENSG00000163029|Q96SB8-2|SMC6;;ENSG00000163029|ENST00000448223|SMC6 4.919824282328288 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16144 85.096 255.0 561190.0 25 0 81160.0 + 33723 SLADDSVLERL 11 119 609.3203733512181 1216.626193769236 2 609.3226196169853 MULTI CID FTMS 0 0 0 16127 167174.8125 0.2084703691631855 -4 0.4882659912109375 17 Unmodified _SLADDSVLERL_ ENSG00000112159|ENST00000369393|MDN1 88.36371040165146 0.0014365852967226 4 {[TV]|[{I|L}S]}ADDSV{I|L}ER{I|L} 11 0 + 107.07 0.0 0.0 8.8003 8.8003 96.055 0.0 0.0 0.0 63.12210387004473 11.57577319177794 11.57577319177794 15.572271839824069 0 1.0629529932484498 2.0 0.930884548956689 1.2416440611282624 + + {[TV]|[{I|L}S]}ADDSV{I|L}ER{I|L};{[TV]|[{I|L}S]}WDSV{I|L}ER{I|L};{[TV]|[{I|L}S]}ADD{I|L}[VS]ER{I|L};{[TV]|[{I|L}S]}ADDSV{I|L}[W{I|L}]V;{[TV]|[{I|L}S]}WD{I|L}[VS]ER{I|L};{[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C))D]V{I|L}ER{I|L};{[TV]|[{I|L}S]}WDSV{I|L}[W{I|L}]V;{[TV]|[{I|L}S]}A[C(Carbamidomethyl (C))S][KP]GER{I|L};{[TV]|[{I|L}S]}{I|L}KHHDD[RP];EEKDSV{I|L}ER{I|L} 8.8003;7.5203;6.9143;6.3087;5.6343;5.4325;5.2436;4.8662;4.7649;4.6399 +;-;-;-;-;-;-;-;-;- + 5119 + 1 0.996 106056.7 1.0 11190 4952 16127 HBL1_DMSO_200M_050219_2,16144 HBL1_DMSO_200M_050219_2,16144,SLADDSVLERL True True SLADDSVLERL 85.096244 609.322619616985 3870577.0 16127.0 ENSG00000112159|ENST00000369393|MDN1 5.480797131856282 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16145 85.11 800.0 110390.0 25 0 9543.8 + 40541 VIYCSEEQSL 10 141 585.7712567845424 1169.5279606358847 2 585.7718383669853 MULTI CID FTMS 0 0 0 16127 149029.96875 0.2365084858129395 2 -0.2700119018554687 18 Unmodified _VIYCSEEQSL_ ENST00000355135.6_2_X:13835118-13835178:-|nuORF 14.838274106304384 0.5985701837916485 4 [{I|L}V]{M(Oxidation (M))|F}M 4 8 30.662 0.0 0.0 2.6217 0.0 0.0 0.0 676.2794614505909 676.2794614505909 16.223637474483468 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [{I|L}V]{M(Oxidation (M))|F}M 2.6217 - 737 1 0.996 72702.9 0.8999999761581421 11191 4952 16127 HBL1_DMSO_200M_050219_2,16145 HBL1_DMSO_200M_050219_2,16145,VIYCSEEQSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16146 85.124 800.0 212620.0 25 0 12546.0 + 38319 TQLDEARGLLL 11 143 614.8474028313024 1227.6802527294046 2 614.8488647341728 MULTI CID FTMS 0 0 0 16127 149042.71875 0.7939992658277791 1 -0.1455841064453125 19 Unmodified _TQLDEARGLLL_ ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;ENST00000566703.1_1_16:30776326-30777900:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40 32.89776655970281 0.3218023389984559 4 [QT]{I|L}DRNQQ{I|L}{I|L} 10 5 [QT] + + 32.273 16.363 7.1422 2.6287 2.6287 45.28 0.0 0.0 0.0 0.0 14.397285225147272 0.0 0.0 0 1.2302046884880935 0.0 0.3807196863200844 0.0 [QT]{I|L}DRNQQ{I|L}{I|L} 2.6287 - 2057 + 1 0.996 124886.7 0.9100000262260436 11192 4952 16127 HBL1_DMSO_200M_050219_2,16146 HBL1_DMSO_200M_050219_2,16146,TQLDEARGLLL False True TQLDEARGLLL 85.123912 614.848864734173 1911106.875 16127.0 ENST00000566703.1_1_16:30776326-30777900:+|nuORF;;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;;ENSG00000103549|ENST00000324685|RNF40;;nc|ENSG00000103549|O75150-3|RNF40 5.159176826477051 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16147 85.13 362.0 248030.0 25 0 17140.0 24608 MLLERNKCL 9 129 560.3052599974462 0 560.3039428591728 PEAK CID FTMS 0 0 0 16127 154585.890625 0.7663476048754393 -2 0.24652099609375 20 Unmodified _MLLERNKCL_ ENST00000417507.6_1_12:102558351-102559534:+|nuORF 18.13498045792455 0.2189554373504223 4 {I|L}A 2 8 10.969 0.0 0.0 0.98061 0.0 0.0 690.3489100321987 241.10199915103752 931.450909183236 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A 0.98061 - 288 + 1 0.996 74662.1 1.0 11193 4952 16127 HBL1_DMSO_200M_050219_2,16147 HBL1_DMSO_200M_050219_2,16147,MLLERNKCL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16149 85.135 56.0 954740.0 25 0 93901.0 + 9856 FPFGKIGTV 9 79 483.2765192074866 964.5384854817733 2 483.2748596072197 MULTI CID FTMS 0 0 0 16148 533399.625 0.0740116338766499 10 -1.1568832397460938 1 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 34.40172386719151 0.1061884637610825 4 G{M(Oxidation (M))|F}PE 4 8 33.175 0.0 0.0 3.4395 0.0 0.0 516.3285999982437 0.0 516.3285999982437 0.0 21.03531276083039 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 G{M(Oxidation (M))|F}PE 3.4395 - 84 1 0.996 46978.6 1.0 11194 4953 16148 HBL1_DMSO_200M_050219_2,16149 HBL1_DMSO_200M_050219_2,16149,FPFGKIGTV True True FPFGKIGTV 85.134885 483.27485960722 562461696.0 16148.0 ENSG00000148843|ENST00000369797|PDCD11 4.717973073323567 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16150 85.136 39.0 1231200.0 25 0 90934.0 + 45000 YPSLPTMTV 9 83 504.75687580551306 1007.499198677826 2 504.7574035525322 MULTI CID FTMS 0 0 0 16148 1280572.25 1.0 0 0.0 2 Unmodified _YPSLPTMTV_ ENSG00000089289|ENST00000356413|IGBP1 53.57557251787612 0.0325303259649373 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}[TP][PA]Y 9 6 + 31.321 0.0 0.0 3.1088 3.1088 65.372 0.0 0.0 0.0 2.04119982655925 5.243500300354143 2.04119982655925 2.04119982655925 0 0.0 1.3010299956639813 1.5 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}[TP][PA]Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[TP][PA]Y;[MT]P{I|L}[TP][VS]Y;[MT]PT[{I|L}P][VS]Y;[TP]M{I|L}[TP][VS]Y;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[RH][VS]Y;{[TV]|[{I|L}S]}PY[TP][PA]Y;[MT]P{I|L}S[{I|L}A][{M(Oxidation (M))|F}E];[TP]MT[{I|L}P][VS]Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[RH][VS]Y 3.1088;2.9062;2.8872;2.7112;2.6911;2.6684;2.6409;2.5884;2.5151;2.4658 -;-;-;-;-;-;-;-;-;- 405 1 0.996 41991.1 1.0 11195 4953 16148 HBL1_DMSO_200M_050219_2,16150 HBL1_DMSO_200M_050219_2,16150,YPSLPTMTV True True YPSLPTMTV 85.136062 504.757403552532 32365816.0 16148.0 ENSG00000089289|ENST00000356413|IGBP1 5.881627082824707 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16151 85.137 23.0 2169600.0 25 0 133290.0 + 4505 DAYKGLFEV 9 81 521.2655802913795 1040.5166076495589 2 521.2665283083916 MULTI CID FTMS 0 0 0 16148 1466389.625 1.0 0 0.0 3 Unmodified _DAYKGLFEV_ ENSG00000101474|ENST00000217456|APMAP;nc|ENSG00000101474|Q9HDC9-2|APMAP 17.11289562659939 0.3734572693229295 4 WEYGD{I|L} 6 7 25.846 0.0 0.0 2.484 0.0 0.0 259.1896229474625 0.0 259.1896229474625 0.0 10.361753205006607 0.0 0.0 0 0.0440228147639203 0.0 0.0 0.0 WEYGD{I|L} 2.484 - 270 1 0.996 48742.4 1.0 11196 4953 16148 HBL1_DMSO_200M_050219_2,16151 HBL1_DMSO_200M_050219_2,16151,DAYKGLFEV False True DAYKGLFEV 85.137241 521.266528308392 12316075.0 16148.0 ENSG00000101474|ENST00000217456|APMAP;;nc|ENSG00000101474|Q9HDC9-2|APMAP 1.9157134691874187 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16152 85.138 42.0 1870200.0 25 0 148610.0 40159 VGPALRCVH 9 93 476.263280709288 950.512008485376 2 476.2633544802666 MULTI CID FTMS 0 0 0 16148 903791.875 0.5833129559744977 -2 0.1997528076171875 4 Unmodified _VGPALRCVH_ ENST00000393409.2_1_3:126755887-126756190:+|nuORF 12.531546534597751 0.4974689918368763 4 [QP]{I|L}V[PA]E[TP] 9 9 + 32.72 0.0 0.0 3.4423 3.4423 78.199 0.0 0.0 0.0 8.76728552850797 2.709541563625251 2.709541563625251 12.596373105057562 0 0.0 0.958607314841775 0.0 0.0 [QP]{I|L}V[PA]E[TP];[{I|L}P]QV[PA]E[TP];[{I|L}P][AG]V[PA]E[TP];[VP]AAV[PA]E[TP] 3.4423;2.1171;1.1483;0.36943 -;-;-;- 218 1 0.996 71888.8 1.0 11197 4953 16148 HBL1_DMSO_200M_050219_2,16152 HBL1_DMSO_200M_050219_2,16152,VGPALRCVH False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16153 85.141 112.0 526270.0 25 0 77670.0 + 34235 SLPPSIVL 8 86 413.2576861554717 824.5008193777435 2 413.2575866580009 MULTI CID FTMS 0 0 0 16148 555261.125 0.3867366946132454 -2 0.1997528076171875 5 Unmodified _SLPPSIVL_ ENSG00000057468|ENST00000263187|MSH4 67.03532852164291 0.116292309877964 4 [PS]{I|L}PS{I|L}V{I|L} 8 2 + 59.307 0.0 0.0 7.1931 7.1931 79.15 0.0 0.0 0.0 1.5970084286751174 10.172203223519531 1.5970084286751174 1.5970084286751174 0 0.6989700043360187 1.5228787452803376 1.548455006504028 0.0 [PS]{I|L}PS{I|L}V{I|L};{[TV]|[{I|L}S]}PPS{I|L}V{I|L};[PS]{I|L}P{I|L}SV{I|L};{[TV]|[{I|L}S]}PP{I|L}SV{I|L};[PS]{I|L}{I|L}PSV{I|L};[TP]VPS{I|L}V{I|L};{[TV]|[{I|L}S]}P{I|L}PSV{I|L};[TP]PVS{I|L}V{I|L};[TP]VP{I|L}SV{I|L};[PS][TP]V{I|L}V{I|L} 7.1931;6.9994;6.3731;6.1794;5.5578;5.4096;5.3641;4.9911;4.5896;4.4564 -;+;-;-;-;-;-;-;-;- + 329 1 0.996 52551.3 1.0 11198 4953 16148 HBL1_DMSO_200M_050219_2,16153 HBL1_DMSO_200M_050219_2,16153,SLPPSIVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16154 85.143 96.0 554510.0 25 0 72577.0 -1 PIKGAEHMSL 10 82 549.7820795404814 1097.5496061477627 2 549.7820312380791 MULTI CID FTMS 0 0 0 16148 424218.71875 0.6172404570753449 -1 0.1455841064453125 6 Oxidation (M) _PIKGAEHM(Oxidation (M))SL_ ENSG00000138606|ENST00000690270|SHF;nc|ENSG00000138606|Q7M4L6-2|SHF;nc|ENSG00000138606|Q7M4L6|SHF 10.823927491677226 0.6659270209832991 4 VCG{I|L} 4 -1 20.349 0.0 0.0 1.8541 0.0 0.0 707.3587624971752 0.0 707.3587624971752 0.0 9.090431028154846 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 VCG{I|L} 1.8541 - 171 + 1 0.996 50146.9 1.0 11199 4953 16148 HBL1_DMSO_200M_050219_2,16154 HBL1_DMSO_200M_050219_2,16154,PIKGAEHMSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16155 85.145 100.0 499030.0 25 0 70120.0 + 1327 AIYEGDWKF 9 65 564.7721476119413 1127.5297422906824 2 564.7718994021416 MULTI CID FTMS 0 0 0 16148 392760.59375 0.6696227197585161 -1 0.1455841064453125 7 Unmodified _AIYEGDWKF_ ENSG00000139714|ENST00000355329|MORN3;nc|ENSG00000139714|Q6PF18-2|MORN3 16.565877749689598 0.3882643987948875 4 [{I|L}A]YE[DG]WK{M(Oxidation (M))|F} 9 0 + 50.506 0.0 0.0 4.4794 4.4794 84.618 0.0 0.0 0.0 34.02813258682965 7.975473068031711 7.975473068031711 50.50630740571602 0 0.3807196863200844 2.0 0.0 0.0 + + [{I|L}A]YE[DG]WK{M(Oxidation (M))|F} 4.4794 + + 92 + 1 0.996 47845.1 1.0 11200 4953 16148 HBL1_DMSO_200M_050219_2,16155 HBL1_DMSO_200M_050219_2,16155,AIYEGDWKF False True AIYEGDWKF 85.145024 564.771899402142 4279111.0 16148.0 nc|ENSG00000139714|Q6PF18-2|MORN3;;ENSG00000139714|ENST00000355329|MORN3 6.998404343922933 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16156 85.147 65.0 657600.0 25 0 57150.0 + -1 MSLIFMHFV 9 76 570.7832752287436 1139.5519975242871 2 570.7825805544853 MULTI CID FTMS 0 0 0 16148 368569.25 0.9097809145128612 -1 0.1455841064453125 8 Oxidation (M) _M(Oxidation (M))SLIFMHFV_ REV__ENSG00000102452|ENST00000251127|NALCN;REV__ENST00000470333.1_1_13:101833448-102051507:-|nuORF;REV__ENST00000497170.5_1_13:101795259-101997694:-|nuORF;REV__nc|ENSG00000102452|Q8IZF0-2|NALCN 12.531546534597751 0.4974689918368763 4 [DP]{I|L}D{I|L}Q 6 -1 26.446 0.0 0.0 2.3207 0.0 0.0 0.0 455.19611193272334 455.19611193272334 0.910555764129569 0.0 0.0 0.0 0 0.0 0.958607314841775 0.3494850021680094 0.0 [DP]{I|L}D{I|L}Q 2.3207 - 278 1 0.996 38798.0 1.0 11201 4953 16148 HBL1_DMSO_200M_050219_2,16156 HBL1_DMSO_200M_050219_2,16156,MSLIFMHFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16157 85.152 277.0 584790.0 25 0 29944.0 + 24757 MPFSVREGINI 11 129 631.8317738313311 1261.6489947294622 2 631.8323242068291 MULTI CID FTMS 0 0 0 16148 319914.65625 0.3108461095611892 -2 0.1997528076171875 9 Unmodified _MPFSVREGINI_ ENSG00000164163|ENST00000296577|ABCE1 70.92866715596459 0.0297132693151486 4 MP{M(Oxidation (M))|F}SV 5 6 70.525 0.0 0.0 5.5899 0.0 0.0 0.0 697.365279730918 697.365279730918 42.90528643506232 0.0 0.0 0.0 0 0.9436726795685344 1.6989700043360187 0.6139829889124311 0.0 + MP{M(Oxidation (M))|F}SV 5.5899 + + 3377 + 1 0.996 128302.3 1.0 11202 4953 16148 HBL1_DMSO_200M_050219_2,16157 HBL1_DMSO_200M_050219_2,16157,MPFSVREGINI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16158 85.154 95.0 668150.0 25 0 90083.0 + 38174 TPQFSGNKPLS 11 68 588.3056704214089 1174.5967879096177 2 588.3116943240166 MULTI CID FTMS 0 0 0 -1 0 10 Unmodified _TPQFSGNKPLS_ REV__ENSG00000107897|ENST00000396271|ACBD5;REV__nc|ENSG00000107897|Q5T8D3-2|ACBD5;REV__nc|ENSG00000107897|Q5T8D3|ACBD5 16.149105407346934 0.6992268271266642 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPDY 6 -1 41.26 0.0 0.0 3.5127 0.0 0.0 0.0 439.23761926822505 439.23761926822505 17.614393726401687 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPDY 3.5127 - 201 + 1 0.996 57366.3 1.0 11203 4953 16148 HBL1_DMSO_200M_050219_2,16158 HBL1_DMSO_200M_050219_2,16158,TPQFSGNKPLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16159 85.165 667.0 434880.0 25 0 51025.0 + + -1 YYYDPLAGTY 10 170 612.8803093327424 1223.7460657322847 2 612.8798095583916 MULTI CID FTMS 0 0 0 16148 297110.28125 0.8172722385480372 -1 0.1455841064453125 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SVRKVPVRGGK_ nc|ENSG00000004534|P78332-2|RBM6;ENSG00000004534|ENST00000266022|RBM6;ENST00000434592.5_1_3:50097096-50127827:+|nuORF;ENST00000441115.5_1_3:50012785-50103056:+|nuORF 2.2527281973983926 0.8645194170429107 4 YYDYP{I|L}AG 8 -1 46.375 0.0 0.0 3.7896 0.0 0.0 0.0 278.31251286153446 278.31251286153446 7.264902833277844 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 YYDYP{I|L}AG 3.7896 - 2596 1 0.996 207014.1 1.0 11204 4953 16148 HBL1_DMSO_200M_050219_2,16159 HBL1_DMSO_200M_050219_2,16159,SVRKVPVRGGK False False YYYDPLAGTY 85.16541 612.879809558392 2982260.75 16148.0 nc|ENSG00000004534|P78332-2|RBM6;;ENSG00000004534|ENST00000266022|RBM6;;ENST00000434592.5_1_3:50097096-50127827:+|nuORF;;ENST00000441115.5_1_3:50012785-50103056:+|nuORF 7.445198535919189 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16160 85.171 289.0 477330.0 25 0 39979.0 + 34403 SLVENIERL 9 148 536.805078953576 1071.5956049739518 2 537.3071166872978 MULTI CID FTMS 0 0 0 16148 282059.4375 0.8982751556348767 -1 0.1455841064453125 12 Unmodified _SLVENIERL_ ENSG00000234127|ENST00000454678|TRIM26 41.95555342248728 0.0647214845423414 4 {[TV]|[{I|L}S]}VEN{I|L}ER{I|L} 9 0 + 73.234 0.0 0.0 6.8341 6.8341 88.868 0.0 0.0 0.0 23.0609017373258 14.092568545288067 14.092568545288067 9.208187539523747 0 0.8494850021680094 2.0 0.2396518287104437 0.25 + + {[TV]|[{I|L}S]}VEN{I|L}ER{I|L};{[TV]|[{I|L}S]}VEGG{I|L}ER{I|L};{[TV]|[{I|L}S]}VEN{I|L}[W{I|L}]V;{[TV]|[{I|L}S]}V{[VA]|[{I|L}G]}{I|L}E[WR];{[TV]|[{I|L}S]}VEGG{I|L}[W{I|L}]V;{[TV]|[{I|L}S]}[PG]{[MG]|[TS]}{I|L}ER{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}E[WR];{[TV]|[{I|L}S]}V[CS]{I|L}[RV]PV;{[TV]|[{I|L}S]}V{[VA]|[{I|L}G]}{I|L}[DP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[TV]|[{I|L}S]}V{[VA]|[{I|L}G]}{I|L}[YN]{[HG]|PP} 6.8341;5.9749;5.3146;4.2894;4.222;3.6157;3.411;3.2946;3.1491;2.9848 +;-;-;-;-;-;-;-;-;- + 3137 + 1 0.996 113329.7 1.0 11205 4953 16148 HBL1_DMSO_200M_050219_2,16160 HBL1_DMSO_200M_050219_2,16160,SLVENIERL True True SLVENIERL 85.170718 537.307116687298 3910585.25 16148.0 ENSG00000234127|ENST00000454678|TRIM26 4.741418441136678 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16161 85.177 353.0 520860.0 25 0 66178.0 + 4658 DAYVLPKLY 9 152 541.3001215762505 1080.585690219301 2 541.3005859255791 MULTI CID FTMS 0 0 0 16148 275426.34375 0.0019244150320392 16 -1.7144775390625 13 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 52.268347100219714 0.0353964759249114 4 [{M(Oxidation (M))|F}V]CV{I|L}PK 7 5 44.334 0.0 0.0 4.1027 0.0 0.0 0.0 291.13572107486567 291.13572107486567 14.770760251333066 0.0 0.0 0.0 0 1.1549471895720984 1.0969100130080565 0.0 0.0 [{M(Oxidation (M))|F}V]CV{I|L}PK 4.1027 - 1040 + 1 0.996 142713.0 1.0 11206 4953 16148 HBL1_DMSO_200M_050219_2,16161 HBL1_DMSO_200M_050219_2,16161,DAYVLPKLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16162 85.18 168.0 436200.0 25 0 31860.0 -1 CSWLEVWI 8 100 546.7638534275968 1091.5131539219935 2 546.7640869021416 MULTI CID FTMS 0 0 0 16148 214614.0625 0.4924913825750853 -1 0.1455841064453125 14 Carbamidomethyl (C) _C(Carbamidomethyl (C))SWLEVWI_ L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|152|1|anti-sense 14.581692164780916 0.6954967302934248 4 [{M(Oxidation (M))|F}V]Q[Y{I|L}]PPQ 8 -1 27.466 0.0 0.0 2.5164 0.0 0.0 0.0 115.98797570897209 115.98797570897209 11.981848314185626 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [{M(Oxidation (M))|F}V]Q[Y{I|L}]PPQ 2.5164 - 356 1 0.996 64530.4 1.0 11207 4953 16148 HBL1_DMSO_200M_050219_2,16162 HBL1_DMSO_200M_050219_2,16162,CSWLEVWI False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 16163 85.183 153.0 1033100.0 25 0 122350.0 + 34156 SLLYNVPAV 9 120 488.2802707437648 974.5459885543296 2 488.2822143435478 MULTI CID FTMS 0 0 0 16148 227867.9375 1.0 0 0.0 15 Unmodified _SLLYNVPAV_ ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-11|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP 32.30548876998284 0.1201446275138228 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}P{I|L}HV 8 6 + 39.685 0.0 0.0 4.0722 4.0722 79.273 0.0 0.0 0.0 9.235162698957282 11.692110146810217 9.235162698957282 10.299632233774432 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}P{I|L}HV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}[Y{I|L}]AV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}P[HV]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}[Y{I|L}]G{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG]P[KG][RK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP][KG][RK];[PA][KA]P{I|L}Y{[ES]|[DT]|[{I|L}C]};[Y{I|L}]NP[KG][RK];{[TV]|[{I|L}S]}{I|L}AC[KG][RK];{[TV]|[{I|L}S]}{[WT]|[RM]}[KG][RK] 4.0722;3.0153;2.2476;2.1881;1.4759;1.12;0.97456;0.94132;0.4718;0.072163 -;-;-;-;-;-;-;-;-;- 399 + 1 0.996 121169.1 1.0 11208 4953 16148 HBL1_DMSO_200M_050219_2,16163 HBL1_DMSO_200M_050219_2,16163,SLLYNVPAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16164 85.198 800.0 268150.0 25 0 27244.0 + -1 LAEMEMSL 8 203 478.2094409348333 954.4043289364666 2 478.7113830447197 MULTI CID FTMS 0 0 0 16148 176140.3125 0.3903191807610701 30 -3.395782470703125 16 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 15.768221252438446 0.6779680726941459 4 [{I|L}A]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))AS 7 -1 32.082 0.0 0.0 3.3614 0.0 0.0 0.0 155.05632629781545 155.05632629781545 8.774933158460758 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 [{I|L}A]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}C(Carbamidomethyl (C))AS 3.3614 - 1087 1 0.996 158394.6 0.8100000023841858 11209 4953 16148 HBL1_DMSO_200M_050219_2,16164 HBL1_DMSO_200M_050219_2,16164,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16165 85.212 800.0 226190.0 25 0 18213.0 + + -1 RIYPHGLVLL 10 152 590.2856923029867 1178.5568316727731 2 590.7885009646416 MULTI CID FTMS 0 0 0 16148 151288.84375 1.0 0 0.0 17 Carbamidomethyl (C) _AQLC(Carbamidomethyl (C))LCKMNV_ ENST00000454078.1_1_6:71318605-71318935:-|nuORF;ENSG00000102172|ENST00000404933|SMS 9.38312468134398 0.6832340498775793 4 C{I|L}PVER{I|L} 7 -1 33.933 0.0 0.0 2.8792 0.0 0.0 350.10158372531083 0.0 350.10158372531083 0.0 20.74494482749841 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 C{I|L}PVER{I|L} 2.8792 - 564 + 1 0.996 138027.8 0.8899999856948853 11210 4953 16148 HBL1_DMSO_200M_050219_2,16165 HBL1_DMSO_200M_050219_2,16165,AQLCLCKMNV False False RIYPHGLVLL 85.212239 590.2875 1302695.25 16148.0 ENST00000454078.1_1_6:71318605-71318935:-|nuORF;;ENSG00000102172|ENST00000404933|SMS 2.806240161259969 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16166 85.226 800.0 142960.0 25 0 24941.0 + 10010 FPLLVPVRRQ 10 92 408.9225404313871 1223.7457918943612 3 408.9221374392509 MULTI CID FTMS 0 0 0 16148 146739.390625 0.8887412698657546 -1 0.1455841064453125 18 Unmodified _FPLLVPVRRQ_ REV__ENSG00000196739|ENST00000356083|COL27A1;REV__nc|ENSG00000196739|Q8IZC6-3|COL27A1 0.6976657623105312 0.723409379185497 4 N 1 -1 5.4846 0.0 0.0 0.44818 0.0 0.0 701.4893964859613 405.18964563541255 1106.679042121374 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.44818 - 14 + 1 0.996 93504.4 0.7200000286102295 11211 4953 16148 HBL1_DMSO_200M_050219_2,16166 HBL1_DMSO_200M_050219_2,16166,FPLLVPVRRQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16167 85.241 800.0 131590.0 25 0 6519.7 + -1 KVVEDIEYLKF 11 142 691.3321390335968 2070.9745877009905 3 691.6667358279228 MULTI CID FTMS 0 0 0 16148 149350.765625 1.0 0 0.0 19 ENSG00000130414|ENST00000252711|NDUFA10;nc|ENSG00000130414|O95299-2|NDUFA10 4 {[TV]|[{I|L}S]}T{M(Oxidation (M))|F}WGG{I|L}PPVVK 13 -1 57.982 0.0 0.0 2.7998 0.0 0.0 0.0 686.1981210433547 686.1981210433547 9.699407690899186 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.0 {[TV]|[{I|L}S]}T{M(Oxidation (M))|F}WGG{I|L}PPVVK 2.7998 - 36166 1 0.996 93736.3 0.8299999833106995 11212 4953 16148 HBL1_DMSO_200M_050219_2,16167 HBL1_DMSO_200M_050219_2,16167, False False KVVEDIEYLKF 85.241059 691.3327 3316298.5 16148.0 ENSG00000130414|ENST00000252711|NDUFA10;;nc|ENSG00000130414|O95299-2|NDUFA10 7.8037002881368 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16168 85.255 800.0 239350.0 25 0 18650.0 32380 RYQFLEEAF 9 145 601.7958615312052 1201.5771701292103 2 601.7952758669853 MULTI CID FTMS 0 0 0 16148 141056.53125 0.7171235994328224 -1 0.1455841064453125 20 Unmodified _RYQFLEEAF_ ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33 56.17704186161178 0.0281986971544335 4 [YQ]R{M(Oxidation (M))|F}{I|L}EEA{M(Oxidation (M))|F} 9 2 + 73.452 0.0 0.0 6.113 6.113 77.276 0.0 0.0 0.0 2.6722032235195314 2.6722032235195314 2.6722032235195314 2.6722032235195314 0 1.325257498915995 0.0 0.3807196863200844 1.0228787452803376 [YQ]R{M(Oxidation (M))|F}{I|L}EEA{M(Oxidation (M))|F};[YT]TE{I|L}RC(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}]QR{I|L}EEA{M(Oxidation (M))|F};[YQ]{M(Oxidation (M))|F}R{I|L}EEA{M(Oxidation (M))|F};[YT]TE{I|L}{M(Oxidation (M))|F}RC(Carbamidomethyl (C)){I|L};{[TV]|[{I|L}S]}[KC]Y{I|L}EEA{M(Oxidation (M))|F};[YQ][VG]{M(Oxidation (M))|F}{I|L}EEA{M(Oxidation (M))|F};[YT]ET{I|L}RC(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}][AG]R{I|L}EEA{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}]Q[VG]{I|L}EEA{M(Oxidation (M))|F} 6.113;5.8906;5.8624;5.6602;5.5196;5.3975;5.3466;5.3232;5.0961;5.0961 -;-;-;-;-;-;-;-;-;- 1640 1 0.996 137962.1 0.7599999904632568 11213 4953 16148 HBL1_DMSO_200M_050219_2,16168 HBL1_DMSO_200M_050219_2,16168,RYQFLEEAF True True RYQFIEEAF 85.25489 601.795275866985 1626923.625 16148.0 nc|ENSG00000122779|O15164-2|TRIM24;;ENSG00000122779|ENST00000343526|TRIM24 4.298637866973877 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16170 85.259 6.1 7530600.0 25 0 522820.0 + 16865 KIFDEILVNA 10 77 581.3297532783104 1160.6449536234206 2 581.3298217654228 MULTI CID FTMS 0 0 0 16169 8812295.0 1.0 0 0.0 1 Unmodified _KIFDEILVNA_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant 27.22323531849824 0.3570408936368626 4 {[{M(Oxidation (M))|F}D]|MM}E{I|L}{I|L}K{I|L}V{[QG]|[NA]} 10 4 + 54.526 0.0 0.0 4.6979 4.6979 72.278 0.0 0.0 0.0 3.7751372576825295 38.32773124424534 3.7751372576825295 3.0102999566398125 0 0.9247425010840048 0.0 0.6861818737241735 0.0 {[{M(Oxidation (M))|F}D]|MM}E{I|L}{I|L}K{I|L}V{[QG]|[NA]};{[{M(Oxidation (M))|F}D]|MM}E{I|L}K{I|L}{I|L}V{[QG]|[NA]};{[{M(Oxidation (M))|F}D]|MM}E{I|L}{I|L}KV{I|L}{[QG]|[NA]};[{I|L}V]EE{M(Oxidation (M))|F}K{I|L}V{[QG]|[NA]};{[{M(Oxidation (M))|F}D]|MM}E{I|L}K{I|L}V{I|L}{[QG]|[NA]};{[NV]|[RG]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}K{I|L}V{[QG]|[NA]};[{I|L}V][YQ]E{I|L}{I|L}V{[QG]|[NA]};[{I|L}V]EE{M(Oxidation (M))|F}KV{I|L}{[QG]|[NA]};{[{M(Oxidation (M))|F}D]|MM}[K{I|L}]NK{I|L}V{[QG]|[NA]};{[NV]|[RG]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}KV{I|L}{[QG]|[NA]} 4.6979;4.4385;3.9208;3.7642;3.6615;3.3459;3.2455;2.9872;2.8192;2.5689 -;-;-;-;-;-;-;-;-;- 344 1 0.996 41748.9 1.0 11214 4954 16169 HBL1_DMSO_200M_050219_2,16170 HBL1_DMSO_200M_050219_2,16170,KIFDEILVNA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16171 85.26 13.0 3329600.0 25 0 516310.0 -1 ALMAAPLSL 9 64 451.75274496202985 901.4909369908596 2 451.7528869509697 MULTI CID FTMS 0 0 0 16169 4286946.5 0.3300844594035321 39 -4.231437683105469 2 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 24.67388899826682 0.2172451872415813 4 [{I|L}A][WE]S 5 -1 30.954 0.0 0.0 3.4337 0.0 0.0 0.0 312.1911215838948 312.1911215838948 11.8692447996815 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A][WE]S 3.4337 - 82 1 0.996 41640.7 1.0 11215 4954 16169 HBL1_DMSO_200M_050219_2,16171 HBL1_DMSO_200M_050219_2,16171,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16172 85.262 22.0 2384100.0 25 0 349550.0 + 39055 TVVIGGVVAV 10 78 457.28956277582046 912.5645726184408 2 457.2895690798759 MULTI CID FTMS 0 0 0 16169 2730203.25 0.9309634575454724 1 -0.1401596069335937 3 Unmodified _TVVIGGVVAV_ nc|ENSG00000165949|P40305-1|IFI27 46.020951573049366 0.1035046897853725 4 {[TV]|[{I|L}S]}VN{I|L}V 6 6 48.096 0.0 0.0 5.2704 0.0 0.0 0.0 284.1594572222097 284.1594572222097 25.291681396006 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.674742501084005 0.0 {[TV]|[{I|L}S]}VN{I|L}V 5.2704 - 609 1 0.996 47429.3 1.0 11216 4954 16169 HBL1_DMSO_200M_050219_2,16172 HBL1_DMSO_200M_050219_2,16172,TVVIGGVVAV True True TVVIGGVVAV 85.261657 457.289569079876 32104060.0 16169.0 nc|ENSG00000165949|P40305-1|IFI27 5.14893118540446 2.0 True 10.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 16173 85.263 54.0 1087200.0 25 0 95825.0 + 16074 ITPDEFHFV 9 83 552.7718179658842 1103.5290829985684 2 552.7720214724541 MULTI CID FTMS 0 0 0 16169 907492.375 0.563977579294671 1 -0.1401596069335937 4 Unmodified _ITPDEFHFV_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 28.486842064014134 0.1687311288560894 4 [{I|L}T]PDE{M(Oxidation (M))|F}HV{M(Oxidation (M))|F} 9 2 + 64.39 0.0 0.0 5.8349 5.8349 89.626 0.0 0.0 0.0 30.489182215261508 12.252684618815088 12.252684618815088 32.44464103855016 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]PDE{M(Oxidation (M))|F}HV{M(Oxidation (M))|F};[{I|L}T]V[HM]EEV{M(Oxidation (M))|F};[{I|L}T]V[YV]D[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F};[{I|L}T][{I|L}T]{M(Oxidation (M))|F}D[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}ED[YV]V[VP];{[{M(Oxidation (M))|F}H]|[RQ]}ED{M(Oxidation (M))|F}[{I|L}T][VP];{[{M(Oxidation (M))|F}H]|[RQ]}[HT][HM]V[VP];[PS]{[DS]|[MA]|[CV]|TT}[YK]DP[VP] 5.8349;2.8948;2.7816;2.7094;2.6413;2.569;1.6009;0.2365 -;-;-;-;-;-;-;- 191 + 1 0.996 53193.6 1.0 11217 4954 16169 HBL1_DMSO_200M_050219_2,16173 HBL1_DMSO_200M_050219_2,16173,ITPDEFHFV False True ITPDEFHFV 85.263053 552.772021472454 33190708.0 16169.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12;;ENST00000479037.5_1_2:230672327-230744801:-|nuORF 8.06869633992513 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16174 85.265 66.0 1113100.0 25 0 106720.0 28744 PVVTAYFQ 8 96 462.744003502894 0 462.7442199587822 PEAK CID FTMS 0 0 0 16169 714473.875 0.2728783386925938 13 -1.3784408569335938 5 Unmodified _PVVTAYFQ_ ENSG00000113492|ENST00000231420|AGXT2;nc|ENSG00000113492|Q9BYV1-2|AGXT2 15.768221252438446 0.4767174489346095 4 VE 2 7 14.068 0.0 0.0 1.5234 0.0 0.0 357.1314873751256 335.20974116496893 692.3412285400946 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 VE 1.5234 - 73 + 1 0.996 61423.5 1.0 11218 4954 16169 HBL1_DMSO_200M_050219_2,16174 HBL1_DMSO_200M_050219_2,16174,PVVTAYFQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16175 85.267 100.0 1052600.0 25 0 192290.0 + 18601 LADTASFCI 9 68 470.7264787384386 939.4384045436772 2 470.7265197634697 MULTI CID FTMS 0 0 0 16169 712257.875 0.3586293009864777 -4 0.5165328979492188 6 Unmodified _LADTASFCI_ REV__ENSG00000112494|ENST00000230256|UNC93A;REV__nc|ENSG00000112494|Q86WB7-2|UNC93A 30.22481116460888 0.1466181017706357 4 {I|L}A 2 -1 43.271 0.0 0.0 4.6061 0.0 0.0 0.0 752.2953770271306 752.2953770271306 24.77629699328141 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}A 4.6061 + + 29 + 1 0.996 86067.0 1.0 11219 4954 16169 HBL1_DMSO_200M_050219_2,16175 HBL1_DMSO_200M_050219_2,16175,LADTASFCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16176 85.269 90.0 1012000.0 25 0 135750.0 + 45589 YVFPGVTRL 9 64 526.3004189311698 1050.5862849291395 2 526.3008300662041 MULTI CID FTMS 0 0 0 16169 684138.875 0.6927768497481915 -1 0.1244277954101562 7 Unmodified _YVFPGVTRL_ ENSG00000160284|ENST00000291672|SPATC1L;nc|ENSG00000160284|Q9H0A9-2|SPATC1L 19.62595529434964 0.305431704817896 4 [YV]{M(Oxidation (M))|F}PR 5 4 50.713 0.0 0.0 4.8271 0.0 0.0 0.0 385.2207430475219 385.2207430475219 38.72363747448347 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [YV]{M(Oxidation (M))|F}PR 4.8271 - 87 + 1 0.996 76176.0 1.0 11220 4954 16169 HBL1_DMSO_200M_050219_2,16176 HBL1_DMSO_200M_050219_2,16176,YVFPGVTRL False True YVFPGVTRL 85.268782 526.300830066204 19291352.0 16169.0 nc|ENSG00000160284|Q9H0A9-2|SPATC1L;;ENSG00000160284|ENST00000291672|SPATC1L 5.026829878489177 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16177 85.271 101.0 700080.0 25 0 102450.0 + 35843 SVLDQKILL 9 97 514.8211193496473 1027.6276857660946 2 514.8212768435478 MULTI CID FTMS 0 0 0 16169 579283.3125 0.2767313104247539 2 -0.2646102905273437 8 Unmodified _SVLDQKILL_ ENSG00000142207|ENST00000382751|URB1 70.33199760932243 0.0209706178985989 4 [VS]{I|L}DQ[K{I|L}]{I|L}{I|L} 9 0 + 75.101 0.0 0.0 7.3082 7.3082 77.69 0.0 0.0 0.0 0.5979667202497438 0.5979667202497438 0.5979667202497438 0.5979667202497438 0 2.4247425010840047 2.0 0.5 0.3054621874040891 + + [VS]{I|L}DQ[K{I|L}]{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}{I|L}[VS]{I|L}{I|L};[VS]{[QG]|[NA]}{I|L}{I|L}[VS]{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}{I|L}{I|L}VS{I|L};[VS]{[QG]|[NA]}{I|L}{I|L}{I|L}VS{I|L};[VS]{I|L}D[AG][K{I|L}]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QK{I|L}[VS]{I|L}{I|L};[KG]AD{I|L}{I|L}[VS]{I|L}{I|L};[KQ]D{I|L}{I|L}[VS]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QK{I|L}{I|L}VS{I|L} 7.3082;7.25;7.1725;6.8459;6.7684;6.4122;5.7408;5.6346;5.5848;5.3366 +;-;-;-;-;-;-;-;-;- + 669 + 1 0.996 58264.8 1.0 11221 4954 16169 HBL1_DMSO_200M_050219_2,16177 HBL1_DMSO_200M_050219_2,16177,SVLDQKILL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16178 85.272 51.0 1117900.0 25 0 117630.0 + 37380 TLAAAVIIDL 10 99 500.308379441363 998.602205949526 2 500.3079406619072 MULTI CID FTMS 0 0 0 16169 566354.6875 0.2177790555846301 -2 0.2700119018554687 9 Unmodified _TLAAAVIIDL_ REV__ENSG00000106066|ENST00000265394|CPVL 43.85829265575387 0.1168243637355526 4 {[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}{I|L}VAAE 9 -1 61.921 0.0 0.0 6.2008 0.0 0.0 0.0 82.06698785953358 82.06698785953358 27.57638152291939 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.3851518780601924 0.0 {[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}{I|L}VAAE 6.2008 - 1309 + 1 0.996 53477.6 1.0 11222 4954 16169 HBL1_DMSO_200M_050219_2,16178 HBL1_DMSO_200M_050219_2,16178,TLAAAVIIDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16179 85.277 230.0 553880.0 25 0 58346.0 + 9651 FLPDAQCYPC 10 140 578.7452621045022 1155.4759712758043 2 578.7457763552666 MULTI CID FTMS 0 0 0 16169 421838.15625 0.8259686291743282 1 -0.1401596069335937 10 Unmodified _FLPDAQCYPC_ REV__ENST00000267116.7_1_12:56636474-56636675:-|nuORF 10.073929032068715 0.6785112666868882 4 [DP]VVNC 6 -1 34.531 0.0 0.0 2.9884 0.0 0.0 0.0 525.1870057819168 525.1870057819168 -0.5047632146914793 0.0 -0.5047632146914793 0.0 0 0.0 1.2218487496163564 0.0 0.3807196863200844 [DP]VVNC 2.9884 - 897 1 0.996 96964.5 1.0 11223 4954 16169 HBL1_DMSO_200M_050219_2,16179 HBL1_DMSO_200M_050219_2,16179,FLPDAQCYPC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16180 85.278 73.0 759650.0 25 0 64104.0 + 10189 FQDPVPLTV 9 113 508.2766820286851 1014.5388111241704 2 508.2765380740166 MULTI CID FTMS 0 0 0 16169 352858.09375 0.3872219084000041 -2 0.2700119018554687 11 Unmodified _FQDPVPLTV_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 39.94969957227396 0.0757326808254658 4 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}[KS]PPV 9 8 + 32.251 0.0 0.0 3.1789 3.1789 65.695 0.0 0.0 0.0 5.5339564285261496 2.028547230732528 2.028547230732528 2.203774648612807 0 0.25 1.2218487496163564 0.3252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}[KS]PPV;[{I|L}P]TVP{M(Oxidation (M))|F}[WR];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[KT]VPPV;{[ET]|[MV]}VVVPD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}T]PVP{M(Oxidation (M))|F}[WR];{[ET]|[MV]}[{I|L}A]{I|L}PD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}[{I|L}P]P{M(Oxidation (M))|F}[WR];{[QN]|[E{I|L}]|[KN]}[HK]{M(Oxidation (M))|F}[WR];{NN|[MP]|[D{I|L}]|[EV]}{[HG]|PP}[W{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.1789;2.9617;2.8822;2.2247;1.5998;1.5835;1.4072;0.31752;0.085007 -;-;-;-;-;-;-;-;- 511 + 1 0.996 49518.1 1.0 11224 4954 16169 HBL1_DMSO_200M_050219_2,16180 HBL1_DMSO_200M_050219_2,16180,FQDPVPLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16181 85.29 654.0 273620.0 25 0 37327.0 -1 0 111 657.3447482168516 1969.0124152507549 3 657.3450195193291 MULTI CID FTMS 0 0 0 16169 299872.65625 0.7944571855347722 3 -0.3877029418945312 12 4 [{I|L}T][NP]N{I|L}{I|L}GS 9 -1 51.616 0.0 0.0 2.6214 0.0 0.0 0.0 1056.5056856744752 1056.5056856744752 18.219361023535505 0.0 0.0 0.0 0 0.0 2.0 0.0 0.4247425010840047 [{I|L}T][NP]N{I|L}{I|L}GS 2.6214 - 573 + 1 0.996 136426.1 1.0 11225 4954 16169 HBL1_DMSO_200M_050219_2,16181 HBL1_DMSO_200M_050219_2,16181, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16182 85.295 311.0 328670.0 25 0 27305.0 + 14070 IAPDELVDI 9 120 492.7664530819341 983.5183532306684 2 492.7662231326103 MULTI CID FTMS 0 0 0 16169 221930.109375 0.4846891283174278 4 -0.4776687622070312 13 Unmodified _IAPDELVDI_ REV__ENSG00000083520|ENST00000377767|DIS3 28.486842064014134 0.1687311288560894 4 {NN|[MP]|[D{I|L}]|[EV]}EPVE 6 -1 39.059 0.0 0.0 3.9714 0.0 0.0 0.0 298.17939994381203 298.17939994381203 17.63251345633968 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5114393726401688 0.0 {NN|[MP]|[D{I|L}]|[EV]}EPVE 3.9714 - 753 1 0.996 78784.5 1.0 11226 4954 16169 HBL1_DMSO_200M_050219_2,16182 HBL1_DMSO_200M_050219_2,16182,IAPDELVDI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16183 85.309 800.0 274360.0 25 0 23818.0 -1 SIVLPYIM 8 155 317.8449638495928 950.5130621489784 3 317.8444091677666 MULTI CID FTMS 0 0 0 16169 200882.03125 1.0 0 0.0 14 Oxidation (M) _SIVLPYIM(Oxidation (M))_ ENSG00000147459|ENST00000276440|DOCK5;ENST00000467709.6_1_8:25246445-25268811:+|nuORF 11.640296217721598 0.738950129755968 4 TVVA 4 -1 54.993 0.0 0.0 5.7856 0.0 0.0 0.0 577.2682816045327 577.2682816045327 22.597046968434142 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 TVVA 5.7856 - 106 + 1 0.996 177688.4 0.7699999809265137 11227 4954 16169 HBL1_DMSO_200M_050219_2,16183 HBL1_DMSO_200M_050219_2,16183,SIVLPYIM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16184 85.323 800.0 233680.0 25 0 9173.2 + 9017 FDFQSMEESL 10 146 616.7591497666679 1231.5037466001356 2 616.7590820193291 MULTI CID FTMS 0 0 0 16169 144645.40625 0.8919882026728313 -2 0.2700119018554687 15 Unmodified _FDFQSMEESL_ REV__ENSG00000253729|ENST00000314191|PRKDC;REV__nc|ENSG00000253729|P78527-2|PRKDC 13.90604991867851 0.6142120002215601 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L}P 8 -1 48.572 0.0 0.0 3.9441 0.0 0.0 0.0 287.0282576687481 287.0282576687481 29.27977691042016 0.0 0.0 0.0 0 1.0 1.2218487496163564 0.0 1.4749073637206092 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L}P 3.9441 - 1102 1 0.996 139869.2 0.9200000166893004 11228 4954 16169 HBL1_DMSO_200M_050219_2,16184 HBL1_DMSO_200M_050219_2,16184,FDFQSMEESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16185 85.337 800.0 343670.0 25 0 39783.0 + 34157 SLLYNVPAV 9 113 975.5536276314511 974.5463511648512 1 975.5543701052666 MULTI CID FTMS 0 0 0 16169 127440.9765625 0.4312378175731913 4 -0.4776687622070312 16 Unmodified _SLLYNVPAV_ ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-11|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP 68.08070601005525 0.0218408846571049 4 {[TV]|[{I|L}S]}{I|L}YNVW 7 3 60.424 0.0 0.0 6.2002 0.0 0.0 0.0 96.06530803424484 96.06530803424484 34.299023902632975 0.0 0.0 0.0 0 1.0 0.958607314841775 1.960409376976188 0.7059771852360797 {[TV]|[{I|L}S]}{I|L}YNVW 6.2002 - 4551 1 0.996 177655.3 0.8399999737739563 11229 4954 16169 HBL1_DMSO_200M_050219_2,16185 HBL1_DMSO_200M_050219_2,16185,SLLYNVPAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16186 85.352 800.0 160060.0 25 0 6364.8 -1 0 123 1034.8197444652617 3101.437403995985 3 1035.155322253704 MULTI CID FTMS 0 0 0 16169 127895.6015625 1.0 0 0.0 17 4 [MN][YG]H[MN]D 8 -1 45.335 0.0 0.0 1.4617 0.0 0.0 0.0 2136.033323908948 2136.033323908948 6.596587725340598 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.3807196863200844 0.4247425010840047 [MN][YG]H[MN]D 1.4617 - 8394 + 1 0.996 87242.3 0.8700000047683716 11230 4954 16169 HBL1_DMSO_200M_050219_2,16186 HBL1_DMSO_200M_050219_2,16186, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16187 85.366 800.0 284130.0 25 0 25097.0 + 43442 WSSAELVPL 9 99 1001.5284649961676 1000.5211885295674 1 1001.526843249798 MULTI CID FTMS 0 0 0 16169 116269.2734375 0.8056075607161227 1 -0.1401596069335937 18 Unmodified _WSSAELVPL_ REV__ENSG00000178974|ENST00000313833|FBXO34 34.10243960390752 0.1078313939113124 4 TVSWD{I|L} 6 -1 42.261 0.0 0.0 4.2239 0.0 0.0 281.137987205275 0.0 281.137987205275 0.0 19.51335651524652 0.0 0.0 0 0.0 0.0 1.4916440611282624 0.0 TVSWD{I|L} 4.2239 - 364 1 0.996 148288.6 0.8500000238418579 11231 4954 16169 HBL1_DMSO_200M_050219_2,16187 HBL1_DMSO_200M_050219_2,16187,WSSAELVPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16188 85.381 800.0 93888.0 25 0 5760.1 -1 0 77 1124.8211262599625 3371.441549380088 3 1125.493334949017 MULTI CID FTMS 0 0 0 16169 66680.7421875 0.6472605084892162 1 -0.1401596069335937 19 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.20732 0.0 0.0 2507.051310776349 714.3478443999865 3221.399155176336 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20732 - 214 + 1 0.996 60014.6 0.800000011920929 11232 4954 16169 HBL1_DMSO_200M_050219_2,16188 HBL1_DMSO_200M_050219_2,16188, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16189 85.395 800.0 375770.0 25 0 96839.0 -1 0 99 1076.1359652935369 3225.3860664808108 3 1076.140673816204 MULTI CID FTMS 0 0 0 16169 98076.8984375 0.1001626798219446 -2 0.2700119018554687 20 4 Y[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]GYC[K{I|L}]T 9 -1 15.2 0.0 0.0 0.47125 0.0 0.0 1183.4148066219325 903.4581707190266 2086.872977340958 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 Y[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]GYC[K{I|L}]T 0.47125 - 506 + 1 0.996 258265.6 0.8700000047683716 11233 4954 16169 HBL1_DMSO_200M_050219_2,16189 HBL1_DMSO_200M_050219_2,16189, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16191 85.399 96.0 403900.0 25 0 72563.0 + + 29852 HVPSTDLILNV 11 54 604.3669225088742 1206.7192920845482 2 604.3666259646416 MULTI CID FTMS 0 0 0 16190 525014.375 0.6603769580033766 1 -0.12445068359375 1 Unmodified _QQPRLKKPVN_ nc|ENSG00000155034|Q96ME1-5|FBXL18;ENSG00000155034|ENST00000382368|FBXL18;nc|ENSG00000155034|Q96ME1-3|FBXL18;nc|ENSG00000155034|Q96ME1-1|FBXL18;nc|ENSG00000155034|Q96ME1-2|FBXL18 0.6976657623105312 0.723409379185497 4 {I|L}{I|L}N[YQ]{[NV]|[RG]} 7 -1 18.873 0.0 0.0 1.564 0.0 0.0 344.2599547816169 0.0 344.2599547816169 0.0 13.38869942710863 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 {I|L}{I|L}N[YQ]{[NV]|[RG]} 1.564 - 25 + 1 0.996 34784.6 1.0 11234 4955 16190 HBL1_DMSO_200M_050219_2,16191 HBL1_DMSO_200M_050219_2,16191,QQPRLKKPVN False False HVPSTDLILNV 85.399456 604.366625964642 3467018.25 16190.0 nc|ENSG00000155034|Q96ME1-5|FBXL18;;ENSG00000155034|ENST00000382368|FBXL18;;nc|ENSG00000155034|Q96ME1-3|FBXL18;;nc|ENSG00000155034|Q96ME1-1|FBXL18;;nc|ENSG00000155034|Q96ME1-2|FBXL18 5.634385744730632 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16192 85.401 42.0 1439000.0 25 0 175860.0 + 21365 LPFPAQPPVV 10 81 532.8093713617271 1063.6041897902542 2 532.8111450076103 MULTI CID FTMS 0 0 0 16190 625576.375 0.1584403910099918 -5 0.6566925048828125 2 Unmodified _LPFPAQPPVV_ ENSG00000139746|ENST00000438737|RBM26;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26 23.1484247019978 0.4485954791219598 4 [DP]{M(Oxidation (M))|F}{I|L}EK 6 8 23.645 0.0 0.0 2.2231 0.0 0.0 0.0 331.2152487104292 331.2152487104292 8.16061246681059 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [DP]{M(Oxidation (M))|F}{I|L}EK 2.2231 - 194 1 0.996 56237.7 1.0 11235 4955 16190 HBL1_DMSO_200M_050219_2,16192 HBL1_DMSO_200M_050219_2,16192,LPFPAQPPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16193 85.402 49.0 448080.0 25 0 72668.0 1405 ALCIFASTD 9 51 314.15348691492704 939.4386313449812 3 314.1531860232353 MULTI CID FTMS 0 0 0 16190 915683.6875 0.4842727225369848 -3 0.4101715087890625 3 Unmodified _ALCIFASTD_ ENSG00000161798|ENST00000293599|AQP5 4.3292370932331545 0.7635526921153418 4 [{I|L}A]V 3 7 25.062 0.0 0.0 2.6677 0.0 0.0 0.0 653.2094820611936 653.2094820611936 19.57711861032834 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A]V 2.6677 - 2 + 1 0.996 26312.2 1.0 11236 4955 16190 HBL1_DMSO_200M_050219_2,16193 HBL1_DMSO_200M_050219_2,16193,ALCIFASTD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16194 85.403 41.0 1258000.0 25 0 121070.0 + 42527 VTLGPVPEI 9 76 462.773281310486 923.532009687772 2 462.7734557986259 MULTI CID FTMS 0 0 0 16190 826256.625 1.0 0 0.0 4 Unmodified _VTLGPVPEI_ ENSG00000117395|ENST00000236051|EBNA1BP2;ENST00000472982.5_1_1:43637061-43637789:-|nuORF 42.09456458481378 0.0639583784996157 4 [EP]{I|L}KV 5 7 43.773 0.0 0.0 4.7397 0.0 0.0 0.0 354.16668921341585 354.16668921341585 22.06608156627958 0.0 0.0 0.0 0 0.5 1.2218487496163564 1.274227503252014 0.0 [EP]{I|L}KV 4.7397 - 145 1 0.996 47162.7 1.0 11237 4955 16190 HBL1_DMSO_200M_050219_2,16194 HBL1_DMSO_200M_050219_2,16194,VTLGPVPEI True True VTLGPVPEI 85.403141 462.773455798626 9756982.0 16190.0 ENSG00000117395|ENST00000236051|EBNA1BP2;;ENST00000472982.5_1_1:43637061-43637789:-|nuORF 2.887986938158671 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16195 85.404 36.0 1630800.0 25 0 241520.0 + -1 GMPDFLEKL 9 89 533.2685346683609 1064.5225164035216 2 533.2686645388603 MULTI CID FTMS 0 0 0 16190 811994.0 0.98628707694751 -1 0.1401596069335937 5 Oxidation (M) _GM(Oxidation (M))PDFLEKL_ ENSG00000084090|ENST00000337288|STARD7 19.361941925380144 0.3125782356748823 4 {[CT]|[{M(Oxidation (M))|F}G]}PD{M(Oxidation (M))|F}{I|L}E[K{I|L}] 9 -1 + 27.289 0.0 0.0 2.5635 2.5635 63.087 0.0 0.0 0.0 1.4401626154040876 1.4401626154040876 1.4401626154040876 1.4401626154040876 0 0.4247425010840047 0.0 0.3252574989159953 0.0 {[CT]|[{M(Oxidation (M))|F}G]}PD{M(Oxidation (M))|F}{I|L}E[K{I|L}];[DP]{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{[DA]|[EG]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{[DA]|[EG]};{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[MD]{I|L}E[K{I|L}];{[CT]|[{M(Oxidation (M))|F}G]}P[YR]M[VP]V;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[R{M(Oxidation (M))|F}]M[VP]V;{[QN]|[E{I|L}]|[KN]}{[ET]|[MV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{[DA]|[EG]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[TV]|[{I|L}S]}V{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[DA]|[EG]};{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{[{M(Oxidation (M))|F}H]|[RQ]}[K{I|L}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]{I|L}{[DA]|[EG]} 2.5635;2.4282;2.0281;1.8374;0.88187;0.71645;0.66681;0.22653;0.15572;0.10124 +;-;-;-;-;-;-;-;-;- + 237 + 1 0.996 53806.8 1.0 11238 4955 16190 HBL1_DMSO_200M_050219_2,16195 HBL1_DMSO_200M_050219_2,16195,GMPDFLEKL False False GMPDFLEKL 85.404318 533.26866453886 17190196.0 16190.0 ENSG00000084090|ENST00000337288|STARD7 3.426575462023417 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16196 85.405 30.0 1554100.0 25 0 154350.0 + 12155 GQMGSFIRL 9 70 504.7701678645786 1007.5257827959572 2 504.7690307497978 MULTI CID FTMS 0 0 0 16190 502922.3125 0.4526440792681513 -1 0.1401596069335937 6 Unmodified _GQMGSFIRL_ ENSG00000119392|ENST00000309971|GLE1 20.41453444215458 0.284085796332423 4 {[QG]|[NA]}MGS{M(Oxidation (M))|F}{I|L}[R{I|L}] 9 0 + 43.874 0.0 0.0 4.3546 4.3546 82.846 0.0 0.0 0.0 26.64197490877392 5.642492736872597 5.642492736872597 22.21848749616356 0 0.5 0.0 0.0 0.0 + + {[QG]|[NA]}MGS{M(Oxidation (M))|F}{I|L}[R{I|L}];{[QG]|[NA]}M[YQ]{I|L}[R{I|L}];{[QG]|[NA]}M{I|L}[YQ][R{I|L}];{[QG]|[NA]}{I|L}M[YQ][R{I|L}] 4.3546;2.1494;1.8506;1.5518 +;-;-;- + 79 + 1 0.996 42967.9 1.0 11239 4955 16190 HBL1_DMSO_200M_050219_2,16196 HBL1_DMSO_200M_050219_2,16196,GQMGSFIRL False True GQMGSFIRL 85.405498 504.769030749798 15783608.0 16190.0 ENSG00000119392|ENST00000309971|GLE1 6.448046525319417 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16197 85.408 104.0 703540.0 25 0 101250.0 + 42524 VTLGPAPAPI 10 79 468.28086558866136 934.5471782441228 2 468.2808105349541 MULTI CID FTMS 0 0 0 16190 424128.6875 0.6916328743517017 1 -0.12445068359375 7 Unmodified _VTLGPAPAPI_ REV__ENSG00000107159|ENST00000378357|CA9 20.453626601364224 0.5043500229302764 4 {[TV]|[{I|L}S]}V{I|L} 4 -1 43.698 0.0 0.0 4.6758 0.0 0.0 0.0 519.2565944292328 519.2565944292328 29.71848749616356 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 {[TV]|[{I|L}S]}V{I|L} 4.6758 - 100 + 1 0.996 63577.9 1.0 11240 4955 16190 HBL1_DMSO_200M_050219_2,16197 HBL1_DMSO_200M_050219_2,16197,VTLGPAPAPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16198 85.41 128.0 781690.0 25 0 101780.0 + 43706 YAYLPLHV 8 119 488.26793201092113 974.5213110886424 2 488.2671386599541 MULTI CID FTMS 0 0 0 16190 391149.25 0.9340107401591138 -1 0.1401596069335937 8 Unmodified _YAYLPLHV_ ENSG00000119599|ENST00000358377|DCAF4;nc|ENSG00000119599|Q8WV16-2|DCAF4;nc|ENSG00000119599|Q8WV16-3|DCAF4;nc|ENSG00000119599|Q8WV16-4|DCAF4;nc|ENSG00000119599|Q8WV16-5|DCAF4 64.08090720244739 0.1161809961245979 4 YAY{I|L}P{I|L}HV 8 0 + 67.988 0.0 0.0 6.9766 6.9766 87.262 0.0 0.0 0.0 33.39948061694351 9.542425094393243 9.542425094393243 7.7815125038364386 0 0.7614393726401688 2.0 0.0 0.0 + + YAY{I|L}P{I|L}HV;YAY{I|L}PH{I|L}V;YAY{I|L}PHV{I|L};YAY{I|L}VHP{I|L};YA[RK]{[DS]|[MA]|[CV]|TT}HV;[PA][KA]P{I|L}YDT;YA[RK][HM]AV;YA[RK][HM]G{I|L} 6.9766;6.1781;5.9974;5.9666;3.1966;2.4249;2.2987;2.118 +;-;-;-;-;-;-;- + 198 + 1 0.996 83902.7 1.0 11241 4955 16190 HBL1_DMSO_200M_050219_2,16198 HBL1_DMSO_200M_050219_2,16198,YAYLPLHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16199 85.416 323.0 238980.0 25 0 37780.0 14971 ILPRVDKRNP 10 91 403.2468556902391 1206.718737670917 3 403.2462646365166 MULTI CID FTMS 0 0 0 16190 357612.03125 0.7839990567554649 1 -0.12445068359375 9 Unmodified _ILPRVDKRNP_ ENSG00000139618|ENST00000380152|BRCA2 1.5922808571145557 0.719271260938363 4 V 1 9 6.9897 0.0 0.0 0.57923 0.0 0.0 513.3135385515799 591.3148897760374 1104.6284283276173 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.57923 + + 5 + 1 0.996 62299.4 1.0 11242 4955 16190 HBL1_DMSO_200M_050219_2,16199 HBL1_DMSO_200M_050219_2,16199,ILPRVDKRNP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16200 85.42 226.0 414910.0 25 0 39970.0 + + -1 ELIGNFVRV 9 103 523.730390957894 1045.446228982588 2 523.7311279177666 MULTI CID FTMS 0 0 0 16190 307905.28125 1.0 0 0.0 10 Carbamidomethyl (C) _EIC(Carbamidomethyl (C))DFYSL_ ENSG00000136940|ENST00000259467|PDCL;nc|ENSG00000136940|Q13371-2|PDCL 14.581692164780916 0.6954967302934248 4 VT 2 -1 34.847 0.0 0.0 3.3332 0.0 0.0 0.0 842.3083018773929 842.3083018773929 2.4219800602186154 0.0 0.0 0.0 0 0.1989700043360188 0.958607314841775 0.3807196863200844 0.0 VT 3.3332 - 118 + 1 0.996 78853.5 1.0 11243 4955 16190 HBL1_DMSO_200M_050219_2,16200 HBL1_DMSO_200M_050219_2,16200,EICDFYSL False False ELIGNFVRV 85.420458 523.731127917767 1399164.0 16190.0 ENSG00000136940|ENST00000259467|PDCL;;nc|ENSG00000136940|Q13371-2|PDCL 6.452890237172444 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16201 85.424 163.0 428790.0 25 0 25668.0 44986 YPSASQTASL 10 116 512.751361639621 1023.488170346042 2 512.7546264529228 MULTI CID FTMS 0 0 0 16190 232873.515625 1.0 0 0.0 11 Unmodified _YPSASQTASL_ ENST00000401088.8_1_1:16722851-16723172:+|nuORF 15.847184025352805 0.5816416552707754 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[TP]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 5 + 26.25 0.0 0.0 2.5647 2.5647 62.415 0.0 0.0 0.0 1.0720996964786875 3.696662315049938 1.0720996964786875 1.0720996964786875 0 0.0 1.3010299956639813 0.7887254899964358 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[TP]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}[TP]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[TP]{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[C(Carbamidomethyl (C))K]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[TP]{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))K]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}{[RE]|[WV]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}{[RE]|[WV]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[RE]|[WV]}{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}[KC]N{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.5647;2.46;2.2706;2.2035;2.1659;2.0988;1.9094;1.8047;1.6497;1.3522 -;-;-;-;-;-;-;-;-;- 486 1 0.996 58733.9 1.0 11244 4955 16190 HBL1_DMSO_200M_050219_2,16201 HBL1_DMSO_200M_050219_2,16201,YPSASQTASL False True YPSLPTMTV 85.423673 512.754626452923 1942125.0 16190.0 ENSG00000089289|ENST00000356413|IGBP1 3.5800132751464844 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16202 85.43 322.0 295600.0 25 0 49728.0 + 39561 VCEHRGAI 8 93 442.7238993589179 883.4332457846358 2 442.7236816287041 MULTI CID FTMS 0 0 0 16190 215102.9375 0.7194219535250066 -1 0.1401596069335937 12 Unmodified _VCEHRGAI_ REV__ENST00000270815.4_1_1:36181107-36181146:-|nuORF 9.347437153973935 0.7675937258251505 4 VS{M(Oxidation (M))|F} 3 -1 34.08 0.0 0.0 3.8577 0.0 0.0 0.0 547.2327364557249 547.2327364557249 10.127881306118454 0.0 0.0 0.0 0 0.0 0.6020599913279624 0.4247425010840047 0.0 VS{M(Oxidation (M))|F} 3.8577 - 97 + 1 0.996 79752.0 1.0 11245 4955 16190 HBL1_DMSO_200M_050219_2,16202 HBL1_DMSO_200M_050219_2,16202,VCEHRGAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16203 85.436 335.0 375870.0 25 0 37857.0 + 27988 PLYLHGKYI 9 139 552.3159507051236 1102.617348477047 2 553.3171264529228 MULTI CID FTMS 0 0 0 16190 212036.171875 1.0 0 0.0 13 Unmodified _PLYLHGKYI_ REV__ENSG00000185483|ENST00000371079|ROR1 24.67388899826682 0.2172451872415813 4 Y{I|L}PY{I|L}V 6 -1 30.711 0.0 0.0 2.7853 0.0 0.0 0.0 351.16779504947505 351.16779504947505 11.04548165299995 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 Y{I|L}PY{I|L}V 2.7853 - 1424 + 1 0.996 99973.2 1.0 11246 4955 16190 HBL1_DMSO_200M_050219_2,16203 HBL1_DMSO_200M_050219_2,16203,PLYLHGKYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16204 85.441 309.0 267790.0 25 0 45950.0 18947 LDCVLSLT 8 89 432.2314298667941 862.4483068003883 2 432.2316161990166 MULTI CID FTMS 0 0 0 16190 210167.1875 1.0 0 0.0 14 Unmodified _LDCVLSLT_ ENST00000553854.1_1_14:82128143-82128728:+|nuORF 5.230669730166228 0.792582437072536 4 {I|L}VQ 3 6 24.693 0.0 0.0 2.8631 0.0 0.0 0.0 519.2060030572874 519.2060030572874 22.21848749616356 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VQ 2.8631 - 23 + 1 0.996 67512.8 1.0 11247 4955 16190 HBL1_DMSO_200M_050219_2,16204 HBL1_DMSO_200M_050219_2,16204,LDCVLSLT False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16205 85.455 789.0 160720.0 25 0 32946.0 + 18412 KVVEDIEYLKF 11 138 691.8816440027288 1381.7487350722574 2 691.8828002810478 MULTI CID FTMS 0 0 0 16190 196053.90625 1.0 0 0.0 15 Unmodified _KVVEDIEYLKF_ ENSG00000130414|ENST00000252711|NDUFA10;nc|ENSG00000130414|O95299-2|NDUFA10 113.99132306285644 0.022086859807927 4 KVVED{I|L}EY{I|L}K{M(Oxidation (M))|F} 11 0 + 102.17 0.0 0.0 7.3946 7.3946 83.0 0.0 0.0 0.0 25.363053244155893 3.174204118521501 3.174204118521501 3.174204118521501 0 3.4604093769761874 0.8860566476931632 0.3807196863200844 0.6382104921644451 + + KVVED{I|L}EY{I|L}K{M(Oxidation (M))|F};KVVED{I|L}EY{I|L}{M(Oxidation (M))|F}K;KVVP{M(Oxidation (M))|F}{I|L}EY{I|L}K{M(Oxidation (M))|F};KVVPPYEY{I|L}K{M(Oxidation (M))|F};KVVP{M(Oxidation (M))|F}{I|L}EY{I|L}{M(Oxidation (M))|F}K;KVVPPYEY{I|L}{M(Oxidation (M))|F}K;KVVPYPEY{I|L}K{M(Oxidation (M))|F};KVVPYPEY{I|L}{M(Oxidation (M))|F}K;KVVQ[QT]EY{I|L}K{M(Oxidation (M))|F};KVVQ[QT]EY{I|L}{M(Oxidation (M))|F}K 7.3946;7.1649;7.0715;6.982;6.8418;6.7523;6.6367;6.407;6.3487;6.119 +;-;-;-;-;-;-;-;-;- + 9055 + 1 0.996 101325.3 1.0 11248 4955 16190 HBL1_DMSO_200M_050219_2,16205 HBL1_DMSO_200M_050219_2,16205,KVVEDIEYLKF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16206 85.468 768.0 197400.0 25 0 15287.0 + 10764 FYLNNSVMEY 10 163 640.2865003620517 1278.5584477909033 2 640.2869140505791 MULTI CID FTMS 0 0 0 16190 191357.171875 1.0 0 0.0 16 Unmodified _FYLNNSVMEY_ ENSG00000134480|ENST00000256897|CCNH;ENST00000505230.1_1_5:86705105-86708611:-|nuORF;ENST00000510020.5_1_5:86704942-86708611:-|nuORF 85.27202061508552 0.012747187882667 4 YYDVSN{[QV]|[N{I|L}]|[RA]|[KV]}EY 10 6 + 44.72 0.0 0.0 3.4977 3.4977 74.658 0.0 0.0 0.0 19.29174692824112 12.431815939753577 12.431815939753577 8.610469015915776 0 0.5 0.0 1.1989700043360187 1.110924374808178 YYDVSN{[QV]|[N{I|L}]|[RA]|[KV]}EY;YYDVE[W{I|L}]EY;YYDVSGG{[QV]|[N{I|L}]|[RA]|[KV]}EY;YYDVS[{I|L}P]MEY;YYDWN{[QV]|[N{I|L}]|[RA]|[KV]}EY;YYDVEH{[HG]|PP}PY;[{M(Oxidation (M))|F}E][YT]S[{I|L}P]MEY;YYDVSE[{I|L}V]EY;YYDVS{M(Oxidation (M))|F}[EP]PY;[{M(Oxidation (M))|F}E][YT]SN{[QV]|[N{I|L}]|[RA]|[KV]}EY 3.4977;2.8242;2.7809;2.7121;2.4157;2.2473;2.2322;2.2033;2.0118;2.0098 -;-;-;-;-;-;-;-;-;- 4239 + 1 0.996 114373.2 1.0 11249 4955 16190 HBL1_DMSO_200M_050219_2,16206 HBL1_DMSO_200M_050219_2,16206,FYLNNSVMEY True True FYLNNSVMEY 85.468174 640.286914050579 1951607.125 16190.0 ENST00000510020.5_1_5:86704942-86708611:-|nuORF;;ENSG00000134480|ENST00000256897|CCNH;;ENST00000505230.1_1_5:86705105-86708611:-|nuORF 5.270585378011067 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16207 85.483 800.0 229740.0 25 0 20671.0 -1 VTLMKPEI 8 177 473.7656536105878 945.5167542879756 2 473.7653991580009 MULTI CID FTMS 0 0 0 16190 194187.71875 1.0 0 0.0 17 Oxidation (M) _VTLM(Oxidation (M))KPEI_ chr12:47216689-47249135|44|20.09|0.69|4.86|+|2|PCED1B,None|2 47.74868867922204 0.1498366402366518 4 VT{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[EP]{I|L} 8 -1 + 60.165 0.0 0.0 6.3632 6.3632 80.908 0.0 0.0 0.0 33.39948061694351 5.0837634879391445 5.0837634879391445 4.056971356259616 0 1.1571406706489746 1.6989700043360187 0.5228787452803376 0.0 VT{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[EP]{I|L};VT{I|L}{I|L}[WD]S{I|L};VT{I|L}G[VP]D{M(Oxidation (M))|F}V;VT{I|L}G[VP]P[YT];VT{I|L}{I|L}[WD]TV;VT{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QN]|[E{I|L}]|[KN]}P;VT{I|L}G[VP][YT]P;VT{I|L}{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P;VT{I|L}[{M(Oxidation (M))|F}V][DG]PV;VT[VG][{I|L}P]D{M(Oxidation (M))|F}V 6.3632;5.9341;5.8255;5.6913;4.956;4.4729;4.39;4.136;4.0686;3.8843 +;-;-;-;-;-;-;-;-;- + 791 + 1 0.996 140165.8 0.8899999856948853 11250 4955 16190 HBL1_DMSO_200M_050219_2,16207 HBL1_DMSO_200M_050219_2,16207,VTLMKPEI False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 16208 85.497 800.0 211110.0 25 0 16307.0 + 42793 VVISSDGQFAL 11 199 568.3034049009416 1134.592256868683 2 568.3049804568291 MULTI CID FTMS 0 0 0 16190 174836.5625 0.0461741139537157 9 -0.95257568359375 18 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 39.94969957227396 0.2131707853268865 4 {[DA]|[EG]}NSS{I|L}VV{M(Oxidation (M))|F}[{I|L}A] 11 6 + 36.537 0.0 0.0 3.2203 3.2203 70.973 0.0 0.0 0.0 5.476698335865716 3.2210667880990584 3.2210667880990584 5.476698335865716 0 0.0 1.0457574905606752 0.7742275032520141 0.2887254899964357 {[DA]|[EG]}NSS{I|L}VV{M(Oxidation (M))|F}[{I|L}A];VV{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{[QG]|[NA]}{M(Oxidation (M))|F}[{I|L}A];{[DA]|[EG]}NSS{M(Oxidation (M))|F}{I|L}VV[{I|L}A];VV{I|L}[Y{M(Oxidation (M))|F}]DVP[{I|L}A];{[DA]|[EG]}NSS{I|L}{M(Oxidation (M))|F}VV[{I|L}A];{[DA]|[EG]}GGSS{I|L}VV{M(Oxidation (M))|F}[{I|L}A];VV[MD]R{[QG]|[NA]}{M(Oxidation (M))|F}[{I|L}A];{[DA]|[EG]}NSS{M(Oxidation (M))|F}VV{I|L}[{I|L}A];[{M(Oxidation (M))|F}V][DV]C(Carbamidomethyl (C))RRA{I|L};[{M(Oxidation (M))|F}V][DV]C(Carbamidomethyl (C)){I|L}[RN]{I|L} 3.2203;2.7376;2.3821;2.2093;2.1709;2.1612;2.0517;2.0067;1.8605;1.8404 -;-;-;-;-;-;-;-;-;- 2070 1 0.996 127589.9 0.8999999761581421 11251 4955 16190 HBL1_DMSO_200M_050219_2,16208 HBL1_DMSO_200M_050219_2,16208,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16209 85.511 800.0 222570.0 25 0 22376.0 + 27380 PIELSHDPVL 10 206 560.3058607318067 1118.5971685304132 2 560.3116332888603 MULTI CID FTMS 0 0 0 -1 0 19 Unmodified _PIELSHDPVL_ REV__ENST00000508906.6_3_6:26376811-26377501:+|nuORF 20.453626601364224 0.5043500229302764 4 [{I|L}P]E{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ME{I|L} 9 -1 + 31.811 0.0 0.0 2.8438 2.8438 69.264 0.0 0.0 0.0 4.771212547196623 8.697114610913484 4.771212547196623 4.771212547196623 0 0.2302046884880938 1.0969100130080565 0.0 0.0 [{I|L}P]E{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ME{I|L};{[QN]|[E{I|L}]|[KN]}P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ME{I|L};[{I|L}P]EKCR{M(Oxidation (M))|F}N{I|L};[{I|L}P]EVK[YE]E{I|L};[{I|L}P]EK{[YD]|[{M(Oxidation (M))|F}M]}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}PKPYME{I|L};[{I|L}P]EKV[YE]E{I|L};{[QN]|[E{I|L}]|[KN]}PKCR{M(Oxidation (M))|F}N{I|L};{[QN]|[E{I|L}]|[KN]}PVK[YE]E{I|L};{[QN]|[E{I|L}]|[KN]}PK{[YD]|[{M(Oxidation (M))|F}M]}{I|L}E{I|L} 2.8438;2.4173;2.3733;2.3165;2.3056;2.1013;2.0883;1.9468;1.89;1.8791 -;-;-;-;-;-;-;-;-;- 5547 1 0.996 137546.7 0.8399999737739563 11252 4955 16190 HBL1_DMSO_200M_050219_2,16209 HBL1_DMSO_200M_050219_2,16209,PIELSHDPVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16210 85.519 406.0 233150.0 25 0 21925.0 + 9996 FPITALREI 9 127 530.31363743094 1058.61272192868 2 530.3138915896416 MULTI CID FTMS 0 0 0 16190 157560.796875 0.3248770421822797 2 -0.2475433349609375 20 Unmodified _FPITALREI_ ENSG00000136807|ENST00000373264|CDK9;nc|ENSG00000136807|P50750-2|CDK9 38.17557092003332 0.0854718145212029 4 {M(Oxidation (M))|F}P{I|L}TA{I|L}VW{I|L} 9 2 + 50.582 0.0 0.0 4.7782 4.7782 78.101 0.0 0.0 0.0 19.57325943207756 6.782118526775136 6.782118526775136 7.342509624031237 0 1.2672203223519531 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}P{I|L}TA{I|L}VW{I|L};{M(Oxidation (M))|F}P{I|L}T[{I|L}P][KP]{M(Oxidation (M))|F};{M(Oxidation (M))|F}P{I|L}{I|L}[TA]VW{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}Q{I|L}{[TV]|[{I|L}S]}E;{M(Oxidation (M))|F}P{I|L}TA{I|L}[W{I|L}]V;{M(Oxidation (M))|F}P{I|L}T[{I|L}P][K{I|L}]M;[{I|L}A]T[R{M(Oxidation (M))|F}]{I|L}{I|L}PE;{M(Oxidation (M))|F}P{I|L}{I|L}[TP][KP]{M(Oxidation (M))|F};[{I|L}T]A[R{M(Oxidation (M))|F}]{I|L}{I|L}PE;{M(Oxidation (M))|F}P{I|L}{I|L}[TA][W{I|L}]V 4.7782;4.0846;4.0028;3.9291;3.8883;3.6426;3.5678;3.5158;3.387;3.113 -;-;-;-;-;-;-;-;-;- 623 + 1 0.996 79627.8 1.0 11253 4955 16190 HBL1_DMSO_200M_050219_2,16210 HBL1_DMSO_200M_050219_2,16210,FPITALREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16212 85.525 79.0 1654600.0 25 0 230160.0 + 42429 VTEVIFFP 8 85 476.263280709288 950.512008485376 2 476.2632629275322 MULTI CID FTMS 0 0 0 16211 680736.3125 0.4393514941518526 1 -0.1230926513671875 1 Unmodified _VTEVIFFP_ REV__ENSG00000182255|ENST00000328224|KCNA4 19.438996006549623 0.6237395211498085 4 VT 2 -1 36.069 0.0 0.0 3.7947 0.0 0.0 0.0 747.3729833085829 747.3729833085829 16.40289353325834 0.0 0.0 0.0 0 0.2396518287104437 1.2218487496163564 0.3494850021680094 0.0 VT 3.7947 + + 291 + 1 1.007 106176.4 1.0 11254 4956 16211 HBL1_DMSO_200M_050219_2,16212 HBL1_DMSO_200M_050219_2,16212,VTEVIFFP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16213 85.526 72.0 727740.0 25 0 117020.0 + 34620 SPLPSLLV 8 83 413.2576861554717 824.5008193777435 2 413.2575866580009 MULTI CID FTMS 0 0 0 16211 805882.125 0.5612930119507255 1 -0.1230926513671875 2 Unmodified _SPLPSLLV_ ENSG00000101558|ENST00000400000|VAPA;nc|ENSG00000101558|Q9P0L0-2|VAPA 56.541270873467816 0.1144128637334507 4 [PS]{I|L}PS{I|L}V{I|L} 8 2 + 62.404 0.0 0.0 7.5688 7.5688 86.058 0.0 0.0 0.0 17.447274948966935 8.667053245199625 8.667053245199625 5.0 0 0.8182503180159344 1.5228787452803376 1.613982988912431 0.0 [PS]{I|L}PS{I|L}V{I|L};[PS]{I|L}P{I|L}SV{I|L};[PS]{I|L}{I|L}PSV{I|L};[PS]{I|L}P{I|L}VS{I|L};{[TV]|[{I|L}S]}PPS{I|L}V{I|L};[TP]VPS{I|L}V{I|L};{[TV]|[{I|L}S]}PP{I|L}SV{I|L};[TP]PVS{I|L}V{I|L};[TP]VP{I|L}SV{I|L};[PS][TP]V{I|L}V{I|L} 7.5688;6.9623;5.5872;5.5359;5.4527;5.3566;4.8462;4.8452;4.7502;4.4911 -;-;-;-;-;-;-;-;-;- 315 1 1.007 47897.8 1.0 11255 4956 16211 HBL1_DMSO_200M_050219_2,16213 HBL1_DMSO_200M_050219_2,16213,SPLPSLLV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16214 85.529 94.0 744840.0 25 0 44546.0 + 24758 MPFSVREGINI 11 85 631.8317738313311 1261.6489947294622 2 631.8322631716728 MULTI CID FTMS 0 0 0 16211 647274.6875 0.6289265418011293 1 -0.1230926513671875 3 Unmodified _MPFSVREGINI_ ENSG00000164163|ENST00000296577|ABCE1 49.74193281347159 0.1190592179673825 4 MP{M(Oxidation (M))|F}SV 5 6 64.825 0.0 0.0 5.1382 0.0 0.0 0.0 697.3648634271982 697.3648634271982 16.889219563410073 0.0 0.0 0.0 0 0.6989700043360187 1.6989700043360187 0.2887254899964357 0.0 + MP{M(Oxidation (M))|F}SV 5.1382 + + 374 + 1 1.007 59973.6 1.0 11256 4956 16211 HBL1_DMSO_200M_050219_2,16214 HBL1_DMSO_200M_050219_2,16214,MPFSVREGINI True True MPFSVREGINI 85.528559 631.832263171673 22528906.0 16211.0 ENSG00000164163|ENST00000296577|ABCE1 7.200633049011231 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16215 85.53 78.0 674580.0 25 0 65606.0 + -1 EPYPYPIPTV 10 74 588.3056704214089 1174.5967879096177 2 588.3026000857353 MULTI CID FTMS 0 0 0 16211 359818.625 0.906025422889256 1 -0.1230926513671875 4 Oxidation (M) _M(Oxidation (M))LPLICHHPV_ ENSG00000143294|ENST00000271526|PRCC 18.13498045792455 0.5432546531930572 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPD[{I|L}P]{M(Oxidation (M))|F}MV 10 -1 + 37.802 0.0 0.0 3.2183 3.2183 62.339 0.0 0.0 0.0 13.339125404248904 2.3957751657678727 2.3957751657678727 0.4157035238736668 0 0.0 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPD[{I|L}P]{M(Oxidation (M))|F}MV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[{I|L}T][C(Carbamidomethyl (C))Q]PTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[TP][C(Carbamidomethyl (C))Q]PTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PP[TP][YV]{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[{I|L}T][HA]{M(Oxidation (M))|F}MV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[TP][HA]{M(Oxidation (M))|F}MV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HA]Y{[VA]|[{I|L}G]}{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[VA]|[{I|L}G]}Y[YG]MV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[VA]|[{I|L}G]}Y{[{M(Oxidation (M))|F}C]|[YS]}TV;[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}[{I|L}P]DPP{[QN]|[E{I|L}]|[KN]} 3.2183;3.1829;2.9266;2.4821;2.3908;2.1345;1.6697;1.5784;1.4285;1.3506 -;-;-;-;-;-;-;-;-;- 240 + 1 1.007 47812.1 1.0 11257 4956 16211 HBL1_DMSO_200M_050219_2,16215 HBL1_DMSO_200M_050219_2,16215,MLPLICHHPV False False EPYPYPIPTV 85.530366 588.302600085735 7033977.5 16211.0 ENSG00000143294|ENST00000271526|PRCC 2.603392670551936 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16216 85.533 134.0 619450.0 25 0 72180.0 + 4659 DAYVLPKLY 9 106 541.3001215762505 1080.585690219301 2 541.3007690310478 MULTI CID FTMS 0 0 0 16211 256992.78125 0.0017956189833895 19 -2.0523681640625 5 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 24.020572477871973 0.2255576514309169 4 {[DA]|[EG]}YV 4 5 29.609 0.0 0.0 2.7401 0.0 0.0 0.0 629.3659996277571 629.3659996277571 11.906140654642812 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YV 2.7401 + + 280 1 1.007 72071.9 1.0 11258 4956 16211 HBL1_DMSO_200M_050219_2,16216 HBL1_DMSO_200M_050219_2,16216,DAYVLPKLY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16217 85.539 324.0 507790.0 25 0 63693.0 + 14867 ILIDLNRGEL 10 133 578.3402026221714 1154.6658523111428 2 578.3405029177666 MULTI CID FTMS 0 0 0 16211 223074.015625 1.0 0 0.0 6 Unmodified _ILIDLNRGEL_ ENSG00000137193|ENST00000373509|PIM1;nc|ENSG00000137193|P11309-2|PIM1 65.47368725323818 0.0222277162070287 4 {I|L}{I|L}{I|L}D{I|L}N 6 4 82.718 0.0 0.0 7.1638 0.0 0.0 0.0 470.23761926822505 470.23761926822505 61.20473640883003 0.0 0.0 0.0 0 0.75 2.0 1.2302046884880935 0.5994850021680094 + {I|L}{I|L}{I|L}D{I|L}N 7.1638 + + 1401 + 1 1.007 125257.5 1.0 11259 4956 16211 HBL1_DMSO_200M_050219_2,16217 HBL1_DMSO_200M_050219_2,16217,ILIDLNRGEL True True ILIDLNRGEL 85.538991 578.340502917767 2548823.75 16211.0 nc|ENSG00000137193|P11309-2|PIM1;;ENSG00000137193|ENST00000373509|PIM1 0.6698724627494812 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16218 85.542 140.0 632860.0 25 0 55004.0 9857 FPFGKIGTV 9 113 483.2765192074866 964.5384854817733 2 483.2766296267509 MULTI CID FTMS 0 0 0 16211 192891.515625 0.0267645786821646 13 -1.325439453125 7 Unmodified _FPFGKIGTV_ ENSG00000148843|ENST00000369797|PDCD11 32.78568957990786 0.1150597335874693 4 {[TV]|[{I|L}S]}[RV]{I|L}{I|L}AP 8 8 37.29 0.0 0.0 3.8661 0.0 0.0 0.0 111.96874683662318 111.96874683662318 0.2973857973282037 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.2887254899964357 {[TV]|[{I|L}S]}[RV]{I|L}{I|L}AP 3.8661 - 549 1 1.007 74270.7 1.0 11260 4956 16211 HBL1_DMSO_200M_050219_2,16218 HBL1_DMSO_200M_050219_2,16218,FPFGKIGTV True True DPALPRLAI 85.541803 483.276629626751 3042890.0 16211.0 ENST00000477069.5_1_9:131747266-131765892:+|nuORF;;ENSG00000095319|ENST00000372577|NUP188;;nc|ENSG00000095319|Q5SRE5-2|NUP188 1.6283707022666931 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16219 85.545 142.0 272960.0 25 0 27456.0 + 44790 YPLYTQITV 9 79 549.2985944383107 1096.582635943421 2 549.2978393435478 MULTI CID FTMS 0 0 0 16211 211332.578125 1.0 0 0.0 8 Unmodified _YPLYTQITV_ ENSG00000086062|ENST00000379731|B4GALT1;nc|ENSG00000086062|P15291-2|B4GALT1 23.1484247019978 0.2366544122328345 4 [{I|L}P]Y[QT]Y 6 4 20.463 0.0 0.0 1.866 0.0 0.0 0.0 328.1907041409401 328.1907041409401 -0.2114406948358294 0.0 -0.2114406948358294 0.0 0 0.0 1.0969100130080565 0.3807196863200844 0.0 [{I|L}P]Y[QT]Y 1.866 - 211 1 1.007 40404.7 1.0 11261 4956 16211 HBL1_DMSO_200M_050219_2,16219 HBL1_DMSO_200M_050219_2,16219,YPLYTQITV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16220 85.548 168.0 371340.0 25 0 59391.0 + 4039 DALSHFPAL 9 100 485.7528333489721 969.491113764744 2 485.7536804080009 MULTI CID FTMS 0 0 0 16211 201634.21875 1.0 0 0.0 9 Unmodified _DALSHFPAL_ ENSG00000186432|ENST00000334256|KPNA4 42.09456458481378 0.0639583784996157 4 [{I|L}A]HSD{M(Oxidation (M))|F}[PA]{I|L} 9 3 + 47.52 0.0 0.0 4.9015 4.9015 71.812 0.0 0.0 0.0 2.4081658869233635 17.715299873086607 2.4081658869233635 2.4081658869233635 0 1.1307196863200843 0.8538719643217619 0.6861818737241735 0.0 [{I|L}A]HSD{M(Oxidation (M))|F}[PA]{I|L};{[TV]|[{I|L}S]}HAD{M(Oxidation (M))|F}[PA]{I|L};{[DA]|[EG]}{I|L}[HS]{M(Oxidation (M))|F}[PA]{I|L};[HS]{I|L}AD{M(Oxidation (M))|F}[PA]{I|L};{[SA]|[TG]}[H{I|L}]D{M(Oxidation (M))|F}[PA]{I|L};{[VA]|[{I|L}G]}[HT]D{M(Oxidation (M))|F}[PA]{I|L};[{I|L}A]D[HS]{M(Oxidation (M))|F}[PA]{I|L};{[VA]|[{I|L}G]}E[HS]{M(Oxidation (M))|F}[PA]{I|L};[HS]{M(Oxidation (M))|F}{I|L}{[DA]|[EG]}[PA]{I|L};[{I|L}A]HY{[DA]|[EG]}[PA]{I|L} 4.9015;4.6531;4.5068;4.4602;3.6392;3.52;2.8853;2.8168;2.5388;2.488 -;-;+;-;-;-;-;-;-;- + 433 1 1.007 52789.3 1.0 11262 4956 16211 HBL1_DMSO_200M_050219_2,16220 HBL1_DMSO_200M_050219_2,16220,DALSHFPAL True True DALSHFPAL 85.547953 485.753680408001 2354305.25 16211.0 ENSG00000186432|ENST00000334256|KPNA4 4.833101272583008 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16221 85.551 163.0 264030.0 25 0 19524.0 + 12083 GQFPSYLETV 10 92 570.7832752287436 1139.5519975242871 2 570.7824584841728 MULTI CID FTMS 0 0 0 16211 189619.40625 0.4680588975545592 2 -0.2130584716796875 10 Unmodified _GQFPSYLETV_ ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5 16.565877749689598 0.5695826726197942 4 [AG]G{M(Oxidation (M))|F}KE 6 8 25.979 0.0 0.0 2.2797 0.0 0.0 0.0 547.2535105460246 547.2535105460246 5.717969668064882 0.0 0.0 0.0 0 0.4247425010840047 0.8538719643217619 0.3807196863200844 0.0 [AG]G{M(Oxidation (M))|F}KE 2.2797 - 443 1 1.007 40955.4 1.0 11263 4956 16211 HBL1_DMSO_200M_050219_2,16221 HBL1_DMSO_200M_050219_2,16221,GQFPSYLETV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16222 85.554 154.0 352520.0 25 0 54078.0 8431 ESLDDLTNLV 10 103 559.7811553767597 1117.5477578203192 2 559.7819702029228 MULTI CID FTMS 0 0 0 16211 186759.90625 0.3846253155887335 -2 0.2646102905273437 11 Unmodified _ESLDDLTNLV_ ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 13.90604991867851 0.6142120002215601 4 [{I|L}P]E{M(Oxidation (M))|F}[C(Carbamidomethyl (C))Q]{I|L}{I|L}V 9 7 + 39.811 0.0 0.0 3.5624 3.5624 77.364 0.0 0.0 0.0 9.542425094393256 10.330145895351857 9.542425094393256 9.542425094393256 0 0.6677353201839438 1.3010299956639813 0.0 0.0 [{I|L}P]E{M(Oxidation (M))|F}[C(Carbamidomethyl (C))Q]{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}[C(Carbamidomethyl (C))Q]{I|L}{I|L}V;[{I|L}P]E[KC]RM{[QN]|[E{I|L}]|[KN]};[{I|L}P]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VRM{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}P[KC]RM{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}P[KC][WM]{I|L}V;{[QN]|[E{I|L}]|[KN]}{[DS]|[MA]|[CV]|TT}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[WR]RM{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}{[ES]|[DT]|[{I|L}C]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))Q]{I|L}{I|L}V 3.5624;2.7085;2.4261;1.618;1.5722;1.3;0.86207;0.45709;0.32658;0.2934 -;-;-;-;-;-;-;-;-;- 236 1 1.007 46901.4 1.0 11264 4956 16211 HBL1_DMSO_200M_050219_2,16222 HBL1_DMSO_200M_050219_2,16222,ESLDDLTNLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16223 85.56 295.0 294980.0 25 0 19846.0 + 36520 TAGDPSMTLSL 11 110 546.7638534275968 1091.5131539219935 2 546.7645141482353 MULTI CID FTMS 0 0 0 16211 167815.03125 0.3850980490022346 2 -0.2130584716796875 12 Unmodified _TAGDPSMTLSL_ REV__ENSG00000117399|ENST00000310955|CDC20 8.155526934196011 0.8366696279279818 4 [QT]{I|L}E[Y{I|L}]P[DN] 9 -1 + 17.047 0.0 0.0 1.5617 1.5617 69.906 0.0 0.0 0.0 0.8486889838218872 -0.5833613234232118 -0.5833613234232118 6.418729441092459 0 0.0 0.0 0.1694451763165201 0.0 [QT]{I|L}E[Y{I|L}]P[DN];[Q{I|L}]TE[Y{I|L}]P[DN];{[TV]|[{I|L}S]}AAE[Y{I|L}]P[DN];{[QN]|[E{I|L}]|[KN]}[QT][Y{I|L}]P[DN];{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]K[NG][DN];{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}][W{I|L}][DN] 1.5617;0.97368;0.76613;0.55217;0.55217;0.23445 -;-;-;-;-;- 151 1 1.007 73370.1 1.0 11265 4956 16211 HBL1_DMSO_200M_050219_2,16223 HBL1_DMSO_200M_050219_2,16223,TAGDPSMTLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16224 85.567 419.0 556840.0 25 0 55103.0 + 10185 FQDLKSDKG 9 183 519.2671383706968 1036.5197238081937 2 519.2670165896416 MULTI CID FTMS 0 0 0 16211 169119.09375 0.8302689631493146 -1 0.12445068359375 13 Unmodified _FQDLKSDKG_ REV__ENST00000359787.5_2_22:36019298-36019394:-|nuORF 27.628801355627647 0.1796483985696185 4 {M(Oxidation (M))|F}VA[NS]KD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 -1 + 51.824 0.0 0.0 4.9998 4.9998 79.785 0.0 0.0 0.0 28.67692984330738 7.706896739454621 7.706896739454621 8.411191524368846 0 1.0 2.0 0.75 1.0044321917401078 {M(Oxidation (M))|F}VA[NS]KD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{M(Oxidation (M))|F}VQDP{[VA]|[{I|L}G]}YV;{M(Oxidation (M))|F}VAGDP{[VA]|[{I|L}G]}YV;{M(Oxidation (M))|F}QDVP{[VA]|[{I|L}G]}YV;{M(Oxidation (M))|F}VADGP{[VA]|[{I|L}G]}YV;VV[VS]YVDQE;{M(Oxidation (M))|F}VQDP[Y{I|L}]GV;{M(Oxidation (M))|F}VQDY{[VA]|[{I|L}G]}PV;{M(Oxidation (M))|F}VAGDP[Y{I|L}]GV;{M(Oxidation (M))|F}VAGDY{[VA]|[{I|L}G]}PV 4.9998;4.1884;4.0691;3.962;3.9486;3.8031;3.5981;3.4954;3.4789;3.3762 -;-;-;-;-;-;-;-;-;- 822 + 1 1.007 180872.8 1.0 11266 4956 16211 HBL1_DMSO_200M_050219_2,16224 HBL1_DMSO_200M_050219_2,16224,FQDLKSDKG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16225 85.569 112.0 598730.0 25 0 77577.0 + 23561 LTLTFPHTL 9 89 521.8007931214731 0 521.8008300662041 PEAK CID FTMS 0 0 0 16211 137673.34375 1.0 0 0.0 14 Unmodified _LTLTFPHTL_ REV__ENST00000444995.7_1_22:25771803-25801278:-|nuORF 26.88365393820708 0.1386685954232994 4 A{M(Oxidation (M))|F}{I|L}PHT 6 -1 30.214 0.0 0.0 2.9008 0.0 0.0 244.1511335068149 128.07203088931877 372.2231643961337 0.0 0.0 0.0 0.0 0 0.0 0.0 1.048455006504028 0.0 A{M(Oxidation (M))|F}{I|L}PHT 2.9008 - 218 + 1 1.007 59397.2 1.0 11267 4956 16211 HBL1_DMSO_200M_050219_2,16225 HBL1_DMSO_200M_050219_2,16225,LTLTFPHTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16226 85.583 800.0 207600.0 25 0 17637.0 -1 0 147 666.3407798850612 1996.000510255384 3 666.6765624880791 MULTI CID FTMS 0 0 0 16211 137783.609375 1.0 0 0.0 15 4 [H{I|L}][NP]{I|L}{[ET]|[MV]}YDG{M(Oxidation (M))|F}{I|L}H{I|L} 14 -1 49.535 0.0 0.0 2.4817 0.0 0.0 0.0 343.1605016935329 343.1605016935329 32.28576759579318 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.3494850021680094 [H{I|L}][NP]{I|L}{[ET]|[MV]}YDG{M(Oxidation (M))|F}{I|L}H{I|L} 2.4817 - 4949 1 1.007 131984.3 0.7099999785423279 11268 4956 16211 HBL1_DMSO_200M_050219_2,16226 HBL1_DMSO_200M_050219_2,16226, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16227 85.592 488.0 311750.0 25 0 37682.0 + 33795 GVLDSVDVRL 10 167 536.805078953576 1071.5956049739518 2 536.8034545779228 MULTI CID FTMS 0 0 0 16211 125259.2109375 0.5088484627286072 3 -0.323883056640625 16 Unmodified _SLDDLLQRL_ ENSG00000169105|ENST00000306243|CHST14 37.97399986684836 0.0865783450051559 4 [VG]{I|L}DSVDVR{I|L} 10 6 + 80.711 0.0 0.0 7.5318 7.5318 88.917 0.0 0.0 0.0 7.7815125038364386 7.971284052836552 7.7815125038364386 7.971284052836552 0 1.1549471895720984 1.6989700043360187 0.4247425010840047 0.0 [VG]{I|L}DSVDVR{I|L};[VG]{I|L}DSVD{I|L}RV;[VG]{I|L}G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DVR{I|L};[VG]{I|L}G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{I|L}RV;[VG]{I|L}DSV{[RE]|[WV]}VV;[VG]G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DVR{I|L};{[TV]|[{I|L}S]}[PS]SVDVR{I|L};[VG]G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D{I|L}RV;R[WE]VDVR{I|L};NV{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DVR{I|L} 7.5318;6.788;5.757;5.0132;4.9864;4.9684;4.5518;4.2246;4.0509;4.0143 -;-;-;-;-;-;-;-;-;- 1071 + 1 1.007 122864.5 1.0 11269 4956 16211 HBL1_DMSO_200M_050219_2,16227 HBL1_DMSO_200M_050219_2,16227,SLDDLLQRL True False GVLDSVDVRL 85.591961 536.803454577923 3910585.25 16211.0 ENSG00000169105|ENST00000306243|CHST14 6.355969429016113 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16228 85.607 800.0 229810.0 25 0 15104.0 -1 0 130 975.4289836322608 1948.843414331321 2 975.9333373904228 MULTI CID FTMS 0 0 0 16211 125317.2578125 1.0 0 0.0 17 4 {M(Oxidation (M))|F} 1 -1 13.099 0.0 0.0 0.67214 0.0 0.0 1783.764112428781 0.0 1783.764112428781 0.0 3.718961226842227 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.67214 - 2995 + 1 1.007 122215.1 0.6499999761581421 11270 4956 16211 HBL1_DMSO_200M_050219_2,16228 HBL1_DMSO_200M_050219_2,16228, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16229 85.621 800.0 130360.0 25 0 14447.0 + 42330 VTADGNILQTI 11 158 572.8162552788804 1143.6179576245606 2 572.8151733279228 MULTI CID FTMS 0 0 0 16211 125324.453125 1.0 0 0.0 18 Unmodified _VTADGNILQTI_ ENSG00000110395|ENST00000264033|CBL 33.82136114134338 0.3075748195101961 4 [{I|L}T]Q[DN]V 6 8 35.925 0.0 0.0 3.1414 0.0 0.0 0.0 470.2670318090143 470.2670318090143 11.55430814516398 0.0 0.0 0.0 0 0.2742275032520141 1.2218487496163564 1.2051120522087029 0.9247425010840048 [{I|L}T]Q[DN]V 3.1414 - 1996 1 1.007 80532.8 0.7099999785423279 11271 4956 16211 HBL1_DMSO_200M_050219_2,16229 HBL1_DMSO_200M_050219_2,16229,VTADGNILQTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16230 85.635 800.0 212730.0 25 0 19868.0 -1 0 144 647.3745901530366 646.3673136864365 1 647.3754150271416 MULTI CID FTMS 0 0 0 16211 119525.78125 1.0 0 0.0 19 4 [{I|L}P]S{M(Oxidation (M))|F}A{I|L} 6 -1 + 58.553 0.0 0.0 9.0588 9.0588 83.379 0.0 0.0 0.0 7.534439825140978 16.197887582883936 7.534439825140978 1.9232392159685787 0 0.5994850021680094 1.6989700043360187 0.6694451763165201 0.0 [{I|L}P]S{M(Oxidation (M))|F}A{I|L};[{I|L}P]AYA{I|L};[{I|L}P]AS{M(Oxidation (M))|F}{I|L};[{I|L}P]{M(Oxidation (M))|F}SA{I|L};[{I|L}P]SA{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{I|L}A{I|L};{[TV]|[{I|L}S]}M{I|L}A{I|L};{[TV]|[{I|L}S]}V{I|L}C{I|L};{[TV]|[{I|L}S]}P{M(Oxidation (M))|F}A{I|L};{[TV]|[{I|L}S]}{I|L}VC{I|L} 9.0588;8.7612;8.6537;8.2498;7.9156;7.8931;7.3892;7.0439;6.7735;6.6652 -;-;-;-;-;-;-;-;-;- 429 1 1.007 131127.5 0.7099999785423279 11272 4956 16211 HBL1_DMSO_200M_050219_2,16230 HBL1_DMSO_200M_050219_2,16230, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16231 85.642 353.0 358780.0 25 0 39202.0 + -1 LAEMEMSL 8 145 478.2094409348333 954.4043289364666 2 478.7116271853447 MULTI CID FTMS 0 0 0 16211 117017.53125 0.2593056994388091 33 -3.657417297363281 20 2 Oxidation (M) _LAEM(Oxidation (M))EM(Oxidation (M))SL_ REV__ENSG00000000460|ENST00000359326|C1orf112;REV__nc|ENSG00000000460|Q9NSG2-2|FIRRM;REV__nc|ENSG00000000460|Q9NSG2-3|FIRRM 15.768221252438446 0.6779680726941459 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}MC(Carbamidomethyl (C))A{M(Oxidation (M))|F} 7 -1 36.419 0.0 0.0 3.8159 0.0 0.0 0.0 95.02483908938396 95.02483908938396 12.00781977329818 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}MC(Carbamidomethyl (C))A{M(Oxidation (M))|F} 3.8159 - 673 1 1.007 99317.1 1.0 11273 4956 16211 HBL1_DMSO_200M_050219_2,16231 HBL1_DMSO_200M_050219_2,16231,LAEMEMSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16233 85.647 17.0 2822900.0 25 0 458150.0 -1 ALMAAPLSL 9 65 451.75274496202985 901.4909369908596 2 451.7529174685478 MULTI CID FTMS 0 0 0 16232 3213093.25 0.2474003695729322 42 -4.58111572265625 1 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 60.824 0.0 0.0 6.7471 6.7471 80.501 0.0 0.0 0.0 17.04119982655925 8.384767769392738 8.384767769392738 3.0102999566398125 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};{[HG]|PP}S{M(Oxidation (M))|F}AS{I|L}A{I|L};{[TV]|[{I|L}S]}[RD]D{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}[W{I|L}]A{I|L} 6.7471;6.4132;4.8568;4.6164;4.5228;4.2765;4.0871;3.6819;2.1968;2.1204 -;-;-;-;-;-;-;-;-;- 153 1 1.019 43870.0 1.0 11274 4957 16232 HBL1_DMSO_200M_050219_2,16233 HBL1_DMSO_200M_050219_2,16233,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16234 85.648 30.0 1725900.0 25 0 198960.0 + 39408 VALDKVIEI 9 83 500.308379441363 998.602205949526 2 500.3082153201103 MULTI CID FTMS 0 0 0 16232 1359707.625 0.5228452222243157 1 -0.0899658203125 2 Unmodified _VALDKVIEI_ ENSG00000119326|ENST00000325551|CTNNAL1;nc|ENSG00000119326|Q9UBT7-2|CTNNAL1;nc|ENSG00000119326|Q9UBT7-3|CTNNAL1 45.69961567697781 0.0497987121815769 4 {[VA]|[{I|L}G]}[VS]VA{I|L}EV{I|L} 10 5 + 69.117 0.0 0.0 6.9214 6.9214 82.087 0.0 0.0 0.0 14.75772496747986 15.026975159433531 14.75772496747986 3.4948500216800937 0 0.5 2.0 0.7742275032520141 0.0 {[VA]|[{I|L}G]}[VS]VA{I|L}EV{I|L};{[VA]|[{I|L}G]}[VS]V{I|L}EAV{I|L};{[VA]|[{I|L}G]}[VS]VE{I|L}AV{I|L};{[VA]|[{I|L}G]}[VS]VAV{[QN]|[E{I|L}]|[KN]}{I|L};{[VA]|[{I|L}G]}[VS]V{I|L}AEV{I|L};{[VA]|[{I|L}G]}[VS]{I|L}G{I|L}EV{I|L};{[VA]|[{I|L}G]}[VS]AV{I|L}EV{I|L};{[VA]|[{I|L}G]}[VS]{I|L}VEAV{I|L};{[VA]|[{I|L}G]}[VS]V{I|L}G{[QN]|[E{I|L}]|[KN]}{I|L};{[VA]|[{I|L}G]}{I|L}DK{I|L}EV{I|L} 6.9214;6.5714;6.3951;6.2738;6.27;6.0183;5.7168;5.6683;5.6224;5.5577 -;-;-;-;-;-;-;-;-;- 1540 1 1.019 45356.9 1.0 11275 4957 16232 HBL1_DMSO_200M_050219_2,16234 HBL1_DMSO_200M_050219_2,16234,VALDKVIEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16235 85.651 133.0 585540.0 25 0 171760.0 -1 0 49 1076.1359652935369 3225.3860664808108 3 1076.471118152142 MULTI CID FTMS 0 0 0 16232 1037239.5625 0.6495613655360782 1 -0.0899658203125 3 4 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYGYW 7 -1 13.945 0.0 0.0 0.43234 0.0 0.0 1020.3799015726904 1162.621747171313 2183.0016487440034 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C))YYGYW 0.43234 - 74 + 1 1.019 78318.0 1.0 11276 4957 16232 HBL1_DMSO_200M_050219_2,16235 HBL1_DMSO_200M_050219_2,16235, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16236 85.652 60.0 651470.0 25 0 122320.0 -1 IASVCYLD 8 44 470.7264787384386 939.4384045436772 2 470.7265502810478 MULTI CID FTMS 0 0 0 16232 847831.6875 0.4268921357202415 -1 0.1230926513671875 4 Carbamidomethyl (C) _IASVC(Carbamidomethyl (C))YLD_ ENST00000373479.8_1_6:37321761-37321914:+|nuORF 13.50788311687929 0.7113601687236069 4 {I|L}A 2 -1 37.959 0.0 0.0 4.0406 0.0 0.0 0.0 752.2939269967388 752.2939269967388 22.12134473697193 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}A 4.0406 + + 10 + 1 1.019 37174.6 1.0 11277 4957 16232 HBL1_DMSO_200M_050219_2,16236 HBL1_DMSO_200M_050219_2,16236,IASVCYLD False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16237 85.654 60.0 889160.0 25 0 57273.0 + 10190 FQDPVPLTV 9 94 508.2766820286851 1014.5388111241704 2 508.2767516970634 MULTI CID FTMS 0 0 0 16232 822295.3125 0.9023762408018388 1 -0.0899658203125 5 Unmodified _FQDPVPLTV_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 49.55428908609986 0.0413471690215031 4 [{I|L}P]T{M(Oxidation (M))|F}QP{I|L}TV 9 5 + 59.874 0.0 0.0 5.9016 5.9016 72.259 0.0 0.0 0.0 0.4453125937239832 9.335295873671754 0.4453125937239832 0.4453125937239832 0 1.0994850021680094 1.5228787452803376 0.3807196863200844 0.0 [{I|L}P]T{M(Oxidation (M))|F}QP{I|L}TV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DPVP{I|L}TV;[{I|L}P]T{M(Oxidation (M))|F}[AG]P{I|L}TV;{[TV]|[{I|L}S]}[CS]PVP{I|L}TV;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}PVP{I|L}TV;[VP]D{M(Oxidation (M))|F}QP{I|L}TV;[{I|L}T]P{M(Oxidation (M))|F}QP{I|L}TV;[VP]{M(Oxidation (M))|F}DQP{I|L}TV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DP{I|L}[VP]TV;[VS][WD]VP{I|L}TV 5.9016;5.8577;4.994;4.6967;4.4586;3.8968;3.857;3.6572;3.6342;3.529 -;+;-;-;-;-;-;-;-;- + 518 1 1.019 47711.4 1.0 11278 4957 16232 HBL1_DMSO_200M_050219_2,16237 HBL1_DMSO_200M_050219_2,16237,FQDPVPLTV True True FQDPVPLTV 85.653907 508.276751697063 24216528.0 16232.0 nc|ENSG00000122779|O15164-2|TRIM24;;ENSG00000122779|ENST00000343526|TRIM24 7.184684912363688 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16238 85.655 49.0 961040.0 25 0 94468.0 -1 PSPSRPLE 8 74 462.744003502894 0 462.7442809939384 PEAK CID FTMS 0 0 0 16232 707558.5 0.2702371559881369 16 -1.669403076171875 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PSPSRPLE_ ENST00000295324.3_1_2:37873351-37873417:-|nuORF 19.438996006549623 0.4285751805470146 4 VE 2 -1 10.802 0.0 0.0 1.1697 0.0 0.0 357.1290459688756 335.20905481510005 692.3381007839756 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 VE 1.1697 - 33 + 1 1.019 42038.3 1.0 11279 4957 16232 HBL1_DMSO_200M_050219_2,16238 HBL1_DMSO_200M_050219_2,16238,PSPSRPLE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16239 85.657 66.0 865250.0 25 0 93970.0 + 10694 FVVEHDFIMA 10 80 604.2946204424379 1206.5746879516755 2 604.2949096560478 MULTI CID FTMS 0 0 0 16232 684894.75 0.4422824701365022 -2 0.2475433349609375 7 Unmodified _FVVEHDFIMA_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000510321.1_1_4:146044588-146044753:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 20.453626601364224 0.5043500229302764 4 V{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM}V{M(Oxidation (M))|F}{I|L}{[DS]|[MA]|[CV]|TT} 9 5 28.478 0.0 0.0 2.3602 0.0 0.0 119.07399184394689 0.0 119.07399184394689 0.0 16.259556258252562 0.0 0.0 0 0.5 0.0 0.0 0.0 V{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM}V{M(Oxidation (M))|F}{I|L}{[DS]|[MA]|[CV]|TT} 2.3602 - 581 1 1.019 43740.8 1.0 11280 4957 16232 HBL1_DMSO_200M_050219_2,16239 HBL1_DMSO_200M_050219_2,16239,FVVEHDFIMA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16240 85.658 63.0 788140.0 25 0 69096.0 + + 9057 KQYEEFYVGL 10 71 638.3168339611557 1274.6191149891113 2 638.3170654177666 MULTI CID FTMS 0 0 0 16232 603760.375 0.5618348536346485 -2 0.2475433349609375 8 Unmodified _FEQSSVFYVGL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 34.93206674587334 0.2904649469012649 4 [Y{M(Oxidation (M))|F}]EE[KQ]YV{[VA]|[{I|L}G]} 10 -1 + 39.128 0.0 0.0 3.0698 3.0698 63.67 0.0 0.0 0.0 1.249387366082999 5.940899702813027 1.249387366082999 1.249387366082999 0 0.5 0.0 0.75 0.3494850021680094 [Y{M(Oxidation (M))|F}]EE[KQ]YV{[VA]|[{I|L}G]};[YE]{M(Oxidation (M))|F}E[KQ]YV{[VA]|[{I|L}G]};[{M(Oxidation (M))|F}E]YE[KQ]YV{[VA]|[{I|L}G]};{[MG]|[TS]}HNE[KQ]YV{[VA]|[{I|L}G]};[KA][WH]WYTN{[VA]|[{I|L}G]};[Y{M(Oxidation (M))|F}][{I|L}V]DAYTN{[VA]|[{I|L}G]};[Y{M(Oxidation (M))|F}]EVVAYTN{[VA]|[{I|L}G]};[YE]{M(Oxidation (M))|F}VVAYTN{[VA]|[{I|L}G]};[KA][WH]DAYT{[{M(Oxidation (M))|F}H]|[RQ]};[{M(Oxidation (M))|F}E]YVVAYTN{[VA]|[{I|L}G]} 3.0698;2.9718;2.7811;2.1903;0.80156;0.77566;0.77566;0.67764;0.56539;0.48696 -;-;-;-;-;-;-;-;-;- 522 1 1.019 45288.8 1.0 11281 4957 16232 HBL1_DMSO_200M_050219_2,16240 HBL1_DMSO_200M_050219_2,16240,FEQSSVFYVGL False False KQYEEFYVGL 85.658348 638.317065417767 19935466.0 16232.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 6.597045421600342 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16241 85.66 66.0 610780.0 25 0 46394.0 + 16866 KIFDEILVNA 10 77 581.3297532783104 1160.6449536234206 2 581.3301879763603 MULTI CID FTMS 0 0 0 16232 618477.6875 0.0701834978856245 3 -0.3336334228515625 9 Unmodified _KIFDEILVNA_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant 27.22323531849824 0.3570408936368626 4 {[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}K{I|L}{I|L}V{[QG]|[NA]} 10 4 + 56.387 0.0 0.0 4.8583 4.8583 72.871 0.0 0.0 0.0 4.259687322722812 7.269987279362624 4.259687322722812 3.0102999566398125 0 0.9247425010840048 0.0 0.3494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}K{I|L}{I|L}V{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}{I|L}K{I|L}V{[QG]|[NA]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F}K{I|L}{I|L}V{[QG]|[NA]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F}{I|L}K{I|L}V{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}K{I|L}{I|L}V{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}{I|L}K{I|L}V{[QG]|[NA]};[{I|L}V][YQ]E{I|L}{I|L}V{[QG]|[NA]};[Q{I|L}][YV]E{I|L}{I|L}V{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}{I|L}V[K{I|L}]{[QG]|[NA]};{[NV]|[RG]}[YQ]K{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]} 4.8583;4.5989;4.4913;4.2319;4.2092;3.9499;3.3357;2.6663;2.3163;2.0998 -;-;-;-;-;-;-;-;-;- 333 1 1.019 39026.3 1.0 11282 4957 16232 HBL1_DMSO_200M_050219_2,16241 HBL1_DMSO_200M_050219_2,16241,KIFDEILVNA False True KIFDEILVNA 85.65995 581.33018797636 225308232.0 16232.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant;;ENSG00000077097|ENST00000264331|TOP2B;;nc|ENSG00000131747|P11388-2|TOP2A 6.2913689613342285 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16242 85.662 78.0 860410.0 25 0 126810.0 + 10504 FVADEELVHL 10 87 586.3040740762447 1170.5935952192892 2 586.3037597537041 MULTI CID FTMS 0 0 0 16232 563885.1875 1.0 0 0.0 10 Unmodified _FVADEELVHL_ ENSG00000149823|ENST00000279281|VPS51;ENST00000530673.1_2_11:64878667-64879056:+|nuORF;ENST00000533827.5_1_11:64876997-64879056:+|nuORF;nc|ENSG00000149823|Q9UID3-2|VPS51 34.10243960390752 0.2198439752719791 4 [{M(Oxidation (M))|F}V]ADEE{I|L}VH{I|L} 10 0 + 34.27 0.0 0.0 2.9276 2.9276 68.848 0.0 0.0 0.0 12.331655954731248 9.030899869919438 9.030899869919438 4.259687322722812 0 0.3807196863200844 0.0 0.3807196863200844 0.0 + + [{M(Oxidation (M))|F}V]ADEE{I|L}VH{I|L};[{M(Oxidation (M))|F}V]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QNVH{I|L};D{I|L}Y{[VA]|[{I|L}G]}QNVH{I|L};[{M(Oxidation (M))|F}V]WEE{I|L}VH{I|L};[{M(Oxidation (M))|F}V]ADEE{I|L}HV{I|L};[{M(Oxidation (M))|F}V]AWWNVH{I|L};[{M(Oxidation (M))|F}V][WE]QNVH{I|L};[{M(Oxidation (M))|F}V]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QNHV{I|L};D{I|L}Y{[VA]|[{I|L}G]}QNHV{I|L};{[DA]|[EG]}EE{I|L}VH{I|L}[{M(Oxidation (M))|F}V] 2.9276;2.5637;2.4864;2.3695;2.2628;2.1947;2.0057;1.8989;1.8216;1.8074 +;-;-;-;-;-;-;-;-;- + 361 + 1 1.019 54894.3 1.0 11283 4957 16232 HBL1_DMSO_200M_050219_2,16242 HBL1_DMSO_200M_050219_2,16242,FVADEELVHL False True FVADEELVHL 85.661755 586.303759753704 4819008.5 16232.0 ENST00000530673.1_2_11:64878667-64879056:+|nuORF;;ENST00000533827.5_1_11:64876997-64879056:+|nuORF;;nc|ENSG00000149823|Q9UID3-2|VPS51;;ENSG00000149823|ENST00000279281|VPS51 7.755067666371663 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16243 85.664 96.0 547590.0 25 0 55162.0 + 45585 YVFHFLIL 8 64 526.3004189311698 1050.5862849291395 2 526.3013793826103 MULTI CID FTMS 0 0 0 16232 318615.375 0.3226382301018031 2 -0.2007904052734375 11 Unmodified _YVFHFLIL_ REV__ENST00000515846.1_1_5:38967217-38971990:-|nuORF 17.086550045450526 0.6584923310065985 4 [YV]{M(Oxidation (M))|F}PR 5 -1 50.273 0.0 0.0 4.7852 0.0 0.0 0.0 385.2200716608032 385.2200716608032 38.05462187404089 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 [YV]{M(Oxidation (M))|F}PR 4.7852 - 35 + 1 1.019 48261.9 1.0 11284 4957 16232 HBL1_DMSO_200M_050219_2,16243 HBL1_DMSO_200M_050219_2,16243,YVFHFLIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16244 85.668 191.0 441040.0 25 0 51622.0 + 3322 AYLGSAIQL 9 100 468.2636260956408 934.5126992580816 2 468.2636596560478 MULTI CID FTMS 0 0 0 16232 255082.28125 0.903751406812154 -1 0.1230926513671875 12 Unmodified _AYLGSAIQL_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000477976.5_1_1:880076-889593:-|nuORF 38.15118350030904 0.0856056900103839 4 {[TV]|[{I|L}S]}QAY 5 7 29.78 0.0 0.0 3.1867 0.0 0.0 0.0 369.21494470169415 369.21494470169415 12.077439286435236 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.1989700043360187 0.0 {[TV]|[{I|L}S]}QAY 3.1867 - 725 1 1.019 70394.9 1.0 11285 4957 16232 HBL1_DMSO_200M_050219_2,16244 HBL1_DMSO_200M_050219_2,16244,AYLGSAIQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16245 85.67 127.0 627250.0 25 0 75433.0 + 18707 ALLSRLEQI 9 103 521.812813350814 1041.611073768428 2 521.8188354372978 MULTI CID FTMS 0 0 0 16232 220948.8125 0.2204786830481528 3 -0.3336334228515625 13 Unmodified _LAIWRDRI_ ENST00000481580.1_1_20:32664521-32665129:+|nuORF;ENSG00000125970|ENST00000246194|RALY;nc|ENSG00000125970|Q9UKM9-2|RALY 44.40701690623563 0.1655546087385432 4 [{I|L}A]GQP{I|L}{M(Oxidation (M))|F}{I|L}A{I|L} 10 7 + 71.833 0.0 0.0 6.8963 6.8963 85.239 0.0 0.0 0.0 21.81241237375588 16.53212513775344 16.53212513775344 6.020599913279625 0 0.5 2.0 0.0 0.0 [{I|L}A]GQP{I|L}{M(Oxidation (M))|F}{I|L}A{I|L};[{I|L}A]GPQ{I|L}{M(Oxidation (M))|F}{I|L}A{I|L};[{I|L}A]GQP{M(Oxidation (M))|F}{I|L}{I|L}A{I|L};[{I|L}A]G[AG]P{I|L}{M(Oxidation (M))|F}{I|L}A{I|L};[{I|L}A]GPQ{M(Oxidation (M))|F}{I|L}{I|L}A{I|L};[{I|L}A]GP[AG]{I|L}{M(Oxidation (M))|F}{I|L}A{I|L};[{I|L}A]G[AG]P{M(Oxidation (M))|F}{I|L}{I|L}A{I|L};[{I|L}A]GQ[KT]Q{I|L}A{I|L};[{I|L}P]QQ{I|L}{M(Oxidation (M))|F}{I|L}A{I|L};[{I|L}A]GP[AG]{M(Oxidation (M))|F}{I|L}{I|L}A{I|L} 6.8963;6.3183;6.2253;6.0165;5.6473;5.4385;5.3454;4.9271;4.8022;4.7674 -;-;-;-;-;-;-;-;-;- 852 1 1.019 69986.3 1.0 11286 4957 16232 HBL1_DMSO_200M_050219_2,16245 HBL1_DMSO_200M_050219_2,16245,LAIWRDRI False False ALLSRLEQI 85.670146 521.818835437298 2010871.5 16232.0 ENST00000481580.1_1_20:32664521-32665129:+|nuORF;;ENSG00000125970|ENST00000246194|RALY;;nc|ENSG00000125970|Q9UKM9-2|RALY 3.1418044567108154 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16246 85.677 368.0 300400.0 25 0 27978.0 + 9426 FLADPSAFVAA 11 134 554.7876547909145 1107.560756648629 2 554.7878906130791 MULTI CID FTMS 0 0 0 16232 249197.859375 0.5122973557586986 -2 0.2475433349609375 14 Unmodified _FLADPSAFVAA_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000496593.5_1_11:61404148-61405105:+|nuORF;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 43.85829265575387 0.1529608345840953 4 {[VA]|[{I|L}G]}[MT]VAE{M(Oxidation (M))|F}VAA 11 6 + 47.611 0.0 0.0 4.2987 4.2987 66.681 0.0 0.0 0.0 0.8631013305446587 7.367585652254185 0.8631013305446587 0.8631013305446587 0 0.4247425010840047 1.154901959985743 0.7614393726401688 0.0 {[VA]|[{I|L}G]}[MT]VAE{M(Oxidation (M))|F}VAA;[PS]A{M(Oxidation (M))|F}VAE{M(Oxidation (M))|F}VAA;{[VA]|[{I|L}G]}[MT]DA{I|L}{M(Oxidation (M))|F}VAA;{[VA]|[{I|L}G]}[MT]V{M(Oxidation (M))|F}EAVAA;[PS]A{M(Oxidation (M))|F}DA{I|L}{M(Oxidation (M))|F}VAA;[PS]A{M(Oxidation (M))|F}V{M(Oxidation (M))|F}EAVAA;[PS]ADA{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}VAA;{[VA]|[{I|L}G]}[MT]{I|L}GE{M(Oxidation (M))|F}VAA;[{I|L}P][YQ]AE{M(Oxidation (M))|F}VAA;[PS]A{M(Oxidation (M))|F}{I|L}GE{M(Oxidation (M))|F}VAA 4.2987;4.2208;3.9203;3.8675;3.8424;3.7896;3.7065;3.6677;3.6175;3.5897 -;-;-;-;-;-;-;-;-;- 4367 1 1.019 89336.6 1.0 11287 4957 16232 HBL1_DMSO_200M_050219_2,16246 HBL1_DMSO_200M_050219_2,16246,FLADPSAFVAA False True FLADPSAFVAA 85.676771 554.787890613079 4741100.5 16232.0 ENST00000496593.5_1_11:61404148-61405105:+|nuORF;;ENSG00000089157|ENST00000392514|RPLP0;;nc|ENSG00000213553|Q8NHW5|RPLP0P6;;nc|ENSG00000089157|P05388-2|RPLP0 1.6470578908920288 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16247 85.68 153.0 441180.0 25 0 44819.0 + 5610 DPALPRLAI 9 90 483.2932500006085 964.571947068017 2 483.2935974001884 MULTI CID FTMS 0 0 0 16232 164815.28125 0.8975536544742226 2 -0.2007904052734375 15 Unmodified _DPALPRLAI_ ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188 25.399314129420983 0.2080152500878129 4 [DP]A{I|L}{I|L} 5 4 48.2 0.0 0.0 4.997 0.0 0.0 0.0 452.2639559381469 452.2639559381469 36.41711332055783 0.0 0.0 0.0 0 1.424742501084005 1.5228787452803376 0.0 0.0 [DP]A{I|L}{I|L} 4.997 - 194 + 1 1.019 54329.4 1.0 11288 4957 16232 HBL1_DMSO_200M_050219_2,16247 HBL1_DMSO_200M_050219_2,16247,DPALPRLAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16248 85.694 800.0 178200.0 25 0 40286.0 29481 QLIWTRRRLQ 10 142 685.4112896793598 1368.8080264255195 2 685.4119140505791 MULTI CID FTMS 0 0 0 16232 156679.921875 0.7987479887950023 -1 0.1230926513671875 16 Unmodified _QLIWTRRRLQ_ ENST00000378230.7_1_1:3768861-3773562:-|nuORF 8.97624648632007 0.6851160995914376 4 [Q{I|L}]S{I|L}{I|L} 5 7 28.662 0.0 0.0 2.094 0.0 0.0 0.0 811.4400204042882 811.4400204042882 3.5032531553120734 0.0 0.0 0.0 0 0.0 0.744727494896694 0.2887254899964357 0.0 [Q{I|L}]S{I|L}{I|L} 2.094 - 468 1 1.019 114749.0 0.7699999809265137 11289 4957 16232 HBL1_DMSO_200M_050219_2,16248 HBL1_DMSO_200M_050219_2,16248,QLIWTRRRLQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16249 85.707 800.0 254960.0 25 0 25091.0 + 18825 LARWDLNP 8 187 492.7664530819341 983.5183532306684 2 492.7670165896416 MULTI CID FTMS 0 0 0 16232 156093.625 0.3409040947630878 7 -0.7050323486328125 17 Unmodified _LARWDLNP_ REV__ENSG00000187902|ENST00000376325|SHISA7 16.942295170755138 0.6606234159769251 4 [EP]D{I|L}VA 6 -1 24.506 0.0 0.0 2.4916 0.0 0.0 0.0 356.1832014929758 356.1832014929758 2.163907771000787 0.0 0.0 0.0 0 0.0 0.5376020021010439 0.0 0.0 [EP]D{I|L}VA 2.4916 - 2819 1 1.019 155999.6 0.6700000166893005 11290 4957 16232 HBL1_DMSO_200M_050219_2,16249 HBL1_DMSO_200M_050219_2,16249,LARWDLNP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16250 85.721 800.0 323540.0 25 0 24846.0 + 22284 LPRTIFPTSTI 11 190 623.3642607329433 1244.7139685326863 2 623.3641845583916 MULTI CID FTMS 0 0 0 16232 149604.921875 0.0887063298941243 -4 0.5121307373046875 18 Unmodified _LPRTIFPTSTI_ ENSG00000139218|ENST00000369367|SCAF11;ENST00000546534.1_1_12:46325244-46326951:-|nuORF 93.44831873261192 0.0005410706345729 4 [TP][R{I|L}]{I|L}{M(Oxidation (M))|F}PTST{I|L} 11 2 + 85.844 0.0 0.0 6.8966 6.8966 78.185 0.0 0.0 0.0 1.5359843160042317 15.070623213458036 1.5359843160042317 1.5359843160042317 0 1.960409376976188 1.2218487496163564 1.924742501084005 0.2614393726401688 [TP][R{I|L}]{I|L}{M(Oxidation (M))|F}PTST{I|L};[{I|L}T][RP]{I|L}{M(Oxidation (M))|F}PTST{I|L};[{I|L}P]RT{I|L}{M(Oxidation (M))|F}PTST{I|L};[TP][R{I|L}]{M(Oxidation (M))|F}{I|L}PTST{I|L};[TP]{M(Oxidation (M))|F}[R{I|L}]{I|L}PTST{I|L};[{I|L}T][RP]{M(Oxidation (M))|F}{I|L}PTST{I|L};[{I|L}T]M[R{I|L}]{I|L}PTST{I|L};{[QN]|[E{I|L}]|[KN]}[KP]{I|L}{M(Oxidation (M))|F}PTST{I|L};[{I|L}P]RT{M(Oxidation (M))|F}{I|L}PTST{I|L};[TP][R{I|L}]{I|L}M{I|L}TST{I|L} 6.8966;6.7732;6.51;6.5098;6.4924;6.3864;6.369;6.1753;6.1232;5.9016 -;-;+;-;-;-;-;-;-;- + 11787 1 1.019 187541.5 0.7699999809265137 11291 4957 16232 HBL1_DMSO_200M_050219_2,16250 HBL1_DMSO_200M_050219_2,16250,LPRTIFPTSTI True True LPRTIFPTSTI 85.721288 623.364184558392 62456418.0 16232.0 ENST00000546534.1_1_12:46325244-46326951:-|nuORF;;ENSG00000139218|ENST00000369367|SCAF11 7.132590611775716 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16251 85.726 149.0 606920.0 25 0 94764.0 + 2358 AQLPMSIRI 9 101 514.7999422004657 1027.5853314677313 2 514.8000366091728 MULTI CID FTMS 0 0 0 16232 145434.375 0.2888655396985753 -2 0.2475433349609375 19 Unmodified _AQLPMSIRI_ ENSG00000116017|ENST00000263620|ARID3A;ENST00000590749.2_19:966789-968568:+|nuORF 51.629811660486645 0.0367964933207742 4 [QA]{I|L}PMS{I|L}R{I|L} 9 0 + 55.06 0.0 0.0 5.3582 5.3582 77.02 0.0 0.0 0.0 31.8283395753868 14.09256854528806 14.09256854528806 4.230078252872502 0 1.0 0.7958800173440752 0.0 0.4247425010840047 + + [QA]{I|L}PMS{I|L}R{I|L};[QA]{I|L}PM[RV]T{I|L};[QA]{I|L}{I|L}[WE]R{I|L};[QA]{I|L}[WE]{I|L}R{I|L};[QA]{I|L}{I|L}[R{M(Oxidation (M))|F}][PA]{I|L};[QA]{I|L}{I|L}{[MG]|[TS]}S[VP]{I|L};[QA]{I|L}PMS[{I|L}V]G{I|L};[QA]{I|L}P[YR][PA]{I|L};[QA]{I|L}{I|L}{[MG]|[TS]}{I|L}SPV;[QA]{I|L}{I|L}{[MG]|[TS]}S{I|L}PV 5.3582;4.9465;4.4621;3.7818;3.7766;3.6408;3.5073;3.4836;3.3267;3.2615 +;-;-;-;-;-;-;-;-;- + 416 + 1 1.019 74431.8 1.0 11292 4957 16232 HBL1_DMSO_200M_050219_2,16251 HBL1_DMSO_200M_050219_2,16251,AQLPMSIRI True True AQLPMSIRI 85.725733 514.800036609173 6731917.5 16232.0 ENSG00000116017|ENST00000263620|ARID3A;;ENST00000590749.2_19:966789-968568:+|nuORF 4.579869906107585 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16252 85.732 358.0 337880.0 25 0 16360.0 + + 18152 LPTHDLPLI 9 137 509.3008667156559 1016.5871804981118 2 510.3032409548759 MULTI CID FTMS 0 0 0 16232 141507.0625 0.9367971721226136 -1 0.1230926513671875 20 Unmodified _KTPPYSVII_ ENSG00000115902|ENST00000234256|SLC1A4;nc|ENSG00000115902|P43007-2|SLC1A4 21.53697664764585 0.2571576504437394 4 {I|L}P{I|L}{I|L}[EC]S{I|L} 8 -1 39.977 0.0 0.0 3.9325 0.0 0.0 130.0982411443993 0.0 130.0982411443993 0.0 27.212783094841363 0.0 0.0 0 0.0 0.0 1.2376954943324543 0.0 {I|L}P{I|L}{I|L}[EC]S{I|L} 3.9325 - 1753 + 1 1.019 99846.8 1.0 11293 4957 16232 HBL1_DMSO_200M_050219_2,16252 HBL1_DMSO_200M_050219_2,16252,KTPPYSVII False False LPTHDLPLI 85.732181 510.303240954876 3678608.5 16232.0 ENSG00000115902|ENST00000234256|SLC1A4;;nc|ENSG00000115902|P43007-2|SLC1A4 3.561651627222697 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16254 85.737 24.0 1361300.0 25 0 233540.0 + 1553 ALLCMWFG 8 58 314.15348691492704 939.4386313449812 3 314.1532165408134 MULTI CID FTMS 0 0 0 16253 1890843.0 1.0 0 0.0 1 Unmodified _ALLCMWFG_ ENSG00000101337|ENST00000398022|TM9SF4 17.086550045450526 0.6584923310065985 4 A{I|L}{I|L}E 4 5 53.928 0.0 0.0 5.7404 0.0 0.0 0.0 510.1732271783813 510.1732271783813 46.938200260161125 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 A{I|L}{I|L}E 5.7404 - 19 + 1 1.037 31252.2 1.0 11294 4958 16253 HBL1_DMSO_200M_050219_2,16254 HBL1_DMSO_200M_050219_2,16254,ALLCMWFG False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16255 85.739 76.0 699550.0 25 0 43058.0 + 12156 GQMGSFIRL 9 96 504.7701678645786 1007.5257827959572 2 504.7705261111259 MULTI CID FTMS 0 0 0 16253 281564.5 0.2534158868863019 2 -0.2436676025390625 2 Unmodified _GQMGSFIRL_ ENSG00000119392|ENST00000309971|GLE1 32.78568957990786 0.1150597335874693 4 {[QG]|[NA]}MGS{M(Oxidation (M))|F}{I|L}R{I|L} 9 0 + 46.297 0.0 0.0 4.5951 4.5951 81.579 0.0 0.0 0.0 30.098812726971712 11.962724883926654 11.962724883926654 11.42667503568731 0 0.5 0.0 0.0 0.3494850021680094 + + {[QG]|[NA]}MGS{M(Oxidation (M))|F}{I|L}R{I|L};{[QG]|[NA]}M[R{M(Oxidation (M))|F}]TR{I|L};{[QG]|[NA]}M{I|L}[YQ]R{I|L};{[QG]|[NA]}M[YQ]{I|L}R{I|L};{[QG]|[NA]}{I|L}M[YQ]R{I|L};[WR][YN]TR{I|L};[WR]S[YQ]R{I|L};{[QG]|[NA]}M[R{M(Oxidation (M))|F}]{[VA]|[{I|L}G]}S{I|L};{[QG]|[NA]}M[R{M(Oxidation (M))|F}]{[VA]|[{I|L}G]}TV;[WR][YN]{[VA]|[{I|L}G]}S{I|L} 4.5951;3.461;3.1622;2.9874;2.6886;2.0297;1.7309;1.5972;1.4224;0.1592 +;-;-;-;-;-;-;-;-;- + 243 + 1 1.037 45664.3 1.0 11295 4958 16253 HBL1_DMSO_200M_050219_2,16255 HBL1_DMSO_200M_050219_2,16255,GQMGSFIRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16256 85.741 83.0 822260.0 25 0 142930.0 -1 LFRSETMCL 9 85 578.7781783727331 1155.5418038122662 2 578.7784301638603 MULTI CID FTMS 0 0 0 16253 422589.875 0.649172998917763 -1 0.0899658203125 3 Carbamidomethyl (C) _LFRSETMC(Carbamidomethyl (C))L_ ENSG00000185344|ENST00000330342|ATP6V0A2 9.347437153973935 0.588369872918737 4 [DG]{[YC]|[HE]}C{I|L}{I|L}RT{I|L} 10 -1 + 37.439 0.0 0.0 3.24 3.24 80.294 0.0 0.0 0.0 10.6246936830415 7.746685615228344 7.746685615228344 37.43942321979237 0 0.0 1.0 0.0 0.5 [DG]{[YC]|[HE]}C{I|L}{I|L}RT{I|L} 3.24 - 131 + 1 1.037 57079.5 1.0 11296 4958 16253 HBL1_DMSO_200M_050219_2,16256 HBL1_DMSO_200M_050219_2,16256,LFRSETMCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16257 85.743 129.0 838140.0 25 0 53133.0 + 22261 LPRLTPPVL 9 129 503.32679011973016 1004.6390273062603 2 503.3266784548759 MULTI CID FTMS 0 0 0 16253 391762.3125 0.0267099916841983 -9 1.1225204467773438 4 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 58.6788170122104 0.0268135626297836 4 [{I|L}P]RT{I|L}PPV{I|L} 9 2 + 67.129 0.0 0.0 6.6819 6.6819 86.097 0.0 0.0 0.0 8.610660597430751 49.68189214203024 8.610660597430751 7.730012720637376 0 1.25 0.7695510786217261 1.1861818737241734 0.0 [{I|L}P]RT{I|L}PPV{I|L};[{I|L}P][{I|L}T]RPPV{I|L};{[QN]|[E{I|L}]|[KN]}KP{I|L}PPV{I|L};[{I|L}P]RT{[HG]|PP}{I|L}V{I|L};[VP]P{[QV]|[N{I|L}]|[RA]|[KV]}PKK{I|L};[VP]{[VA]|[{I|L}G]}[PG]PKK{I|L};[{I|L}P][VG][PG]PKK{I|L};[VG][{I|L}P][PG]PKK{I|L};{[QN]|[E{I|L}]|[KN]}KP{[HG]|PP}{I|L}V{I|L};[{I|L}P]R[VP]P[{I|L}T]{I|L} 6.6819;5.9125;5.1777;2.9365;2.3436;1.7266;1.5761;1.4893;1.4323;1.2921 -;-;-;-;-;-;-;-;-;- 700 1 1.037 83244.6 1.0 11297 4958 16253 HBL1_DMSO_200M_050219_2,16257 HBL1_DMSO_200M_050219_2,16257,LPRLTPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16258 85.745 88.0 565490.0 25 0 58463.0 + -1 FQLMACRQ 8 73 527.2503692864419 1052.4861856396838 2 527.2507812380791 MULTI CID FTMS 0 0 0 16253 357240.53125 1.0 0 0.0 5 Carbamidomethyl (C) _FQLMAC(Carbamidomethyl (C))RQ_ REV__ENSG00000115760|ENST00000421745|BIRC6 18.13498045792455 0.6430038125133779 4 DQE 3 -1 28.94 0.0 0.0 2.7497 0.0 0.0 662.3349476544937 0.0 662.3349476544937 0.0 4.625984483110628 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 DQE 2.7497 - 189 1 1.037 44118.0 1.0 11298 4958 16253 HBL1_DMSO_200M_050219_2,16258 HBL1_DMSO_200M_050219_2,16258,FQLMACRQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16259 85.749 217.0 373350.0 25 0 78488.0 + 28755 PWAGPLSL 8 99 420.73445722342944 839.4543615136589 2 420.7343932986259 MULTI CID FTMS 0 0 0 16253 296751.75 0.1682331127442209 -3 0.3375091552734375 6 Unmodified _PWAGPLSL_ ENST00000368347.8_1_1:155293744-155293912:+|nuORF 45.7499826716795 0.1592378023510922 4 [WP]GAP{I|L}S{I|L} 8 2 + 63.581 0.0 0.0 7.5741 7.5741 81.807 0.0 0.0 0.0 20.96910013008056 42.94653786155799 20.96910013008056 2.442190502882156 0 0.9247425010840048 1.3979400086720375 0.0 0.0 [WP]GAP{I|L}S{I|L};[WP]GAPS{I|L}{I|L};[WP]QP{I|L}S{I|L};[WP]QPS{I|L}{I|L};[WP]G{I|L}[PA]S{I|L};[WP]{I|L}G[PA]S{I|L};[PG]WAP{I|L}S{I|L};[WP]{I|L}[QP]S{I|L};[{I|L}P]WG[PA]S{I|L};[{M(Oxidation (M))|F}V]{I|L}[WY]{I|L} 7.5741;7.2832;6.8106;6.5196;6.4163;5.6991;4.9819;4.9355;4.8412;4.7524 -;-;-;-;-;-;-;-;-;- 348 1 1.037 69753.4 1.0 11299 4958 16253 HBL1_DMSO_200M_050219_2,16259 HBL1_DMSO_200M_050219_2,16259,PWAGPLSL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16260 85.752 120.0 728450.0 25 0 66754.0 + 25712 NIIELVHQV 9 114 532.8093713617271 1063.6041897902542 2 532.8102905154228 MULTI CID FTMS 0 0 0 16253 296050.5 0.074981023665901 -2 0.2130584716796875 7 Unmodified _NIIELVHQV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 32.78568957990786 0.1150597335874693 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHQV 9 0 + 66.335 0.0 0.0 6.2368 6.2368 80.689 0.0 0.0 0.0 25.108332209124697 4.259687322722819 4.259687322722819 4.259687322722819 0 0.805462187404089 2.0 0.0 0.1861818737241735 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHQV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VH[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}HN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[PS]PVPV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}HNV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[TA][YK]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EVV[HQ]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RH]{[CP]|[EA]}{I|L}V 6.2368;5.8363;5.196;4.7955;4.7281;4.5028;4.3276;3.232;3.1145;3.0665 +;-;-;-;-;-;-;-;-;- + 633 + 1 1.037 76243.0 1.0 11300 4958 16253 HBL1_DMSO_200M_050219_2,16260 HBL1_DMSO_200M_050219_2,16260,NIIELVHQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16261 85.754 120.0 598790.0 25 0 96137.0 + 12594 GVIIKGLEEI 10 98 535.8272016306679 1069.6398503281357 2 535.8270751833916 MULTI CID FTMS 0 0 0 16253 263382.5 0.3501102018160847 -1 0.0899658203125 8 Unmodified _GVIIKGLEEI_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 57.72198328787511 0.0425618229276495 4 [VG]{I|L}{I|L}WDVR{I|L} 9 5 + 72.954 0.0 0.0 6.8205 6.8205 79.501 0.0 0.0 0.0 2.352321400245998 2.352321400245998 2.352321400245998 2.352321400245998 0 1.8098943791441968 1.6989700043360187 0.7742275032520141 0.0 [VG]{I|L}{I|L}WDVR{I|L};[VG]{I|L}GTE{I|L}{I|L}R{I|L};[VG]{I|L}GT{I|L}E{I|L}R{I|L};R{I|L}{I|L}W[Q{I|L}]E{I|L};[VG]{I|L}GTE{I|L}{I|L}[VG]{I|L};[VG]{I|L}GT{I|L}{I|L}RE{I|L};[VG]{I|L}GT{I|L}{I|L}ER{I|L};[VG]{I|L}{I|L}WD[R{I|L}]V;[VG]{I|L}{I|L}{M(Oxidation (M))|F}[PG]VR{I|L};[VG]{I|L}GT{I|L}E{I|L}[VG]{I|L} 6.8205;6.6005;6.0377;5.8181;5.7437;5.4949;5.4522;5.3931;5.3264;5.1809 -;-;-;-;-;-;-;-;-;- 1717 + 1 1.037 61530.0 1.0 11301 4958 16253 HBL1_DMSO_200M_050219_2,16261 HBL1_DMSO_200M_050219_2,16261,GVIIKGLEEI True True GVIIKGLEEI 85.754289 535.827075183392 6015370.0 16253.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 2.9293712774912515 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16262 85.759 239.0 351600.0 25 0 34482.0 + 21324 KSADTLWGI 9 113 495.7668593636784 989.5191657941568 2 495.7664062380791 MULTI CID FTMS 0 0 0 16253 260837.546875 0.8228613918291579 -1 0.0899658203125 9 Unmodified _LPEYLWGL_ nc|ENSG00000134333|P00338-4|LDHA;nc|ENSG00000134333|P00338-3|LDHA;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;ENSG00000134333|ENST00000422447|LDHA;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 40.44857923139169 0.2267865117615937 4 {[QD]|[EN]|[WG]|[KD]|[RS]}MK{I|L}WG{I|L} 8 4 + 68.206 0.0 0.0 6.8929 6.8929 86.673 0.0 0.0 0.0 9.24646045735463 16.40978057358332 9.24646045735463 7.429928190999391 0 1.2302046884880935 0.0 0.8494850021680094 0.3252574989159953 {[QD]|[EN]|[WG]|[KD]|[RS]}MK{I|L}WG{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}M{I|L}KWG{I|L};{[TV]|[{I|L}S]}[NS]T{I|L}WG{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}MK{I|L}{[DA]|[EG]}G{I|L};[VS]{[QS]|[NT]}T{I|L}WG{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}M{I|L}K{[DA]|[EG]}G{I|L};{[VA]|[{I|L}G]}[WM]KWG{I|L};[VS][C(Carbamidomethyl (C))R]{I|L}WG{I|L};[W{I|L}]{[MG]|[TS]}KWG{I|L};[{I|L}P][YE]{I|L}WG{I|L} 6.8929;6.142;5.9584;5.9568;5.5751;5.206;4.9779;4.9159;4.6247;4.5216 -;-;-;-;-;-;-;-;-;+ + 518 1 1.037 68169.5 1.0 11302 4958 16253 HBL1_DMSO_200M_050219_2,16262 HBL1_DMSO_200M_050219_2,16262,LPEYLWGL False False KSADTLWGI 85.758758 495.766406238079 2365362.0 16253.0 nc|ENSG00000134333|P00338-4|LDHA;;nc|ENSG00000134333|P00338-3|LDHA;;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;;ENSG00000134333|ENST00000422447|LDHA;;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 4.469084819157918 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16263 85.763 218.0 160790.0 25 0 23144.0 38076 TPHRSCAI 8 69 442.7238993589179 883.4332457846358 2 442.7237426638603 MULTI CID FTMS 0 0 0 16253 248538.296875 0.8312480951757831 2 -0.2436676025390625 10 Unmodified _TPHRSCAI_ ENSG00000168594|ENST00000359240|ADAM29;nc|ENSG00000168594|Q9UKF5-2|ADAM29;nc|ENSG00000168594|Q9UKF5-3|ADAM29 6.354104778181461 0.7857632046190106 4 {I|L} 1 7 13.979 0.0 0.0 1.5824 0.0 0.0 752.3384562111968 0.0 752.3384562111968 0.0 3.141944650251558 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5824 + + 15 + 1 1.037 36175.2 1.0 11303 4958 16253 HBL1_DMSO_200M_050219_2,16263 HBL1_DMSO_200M_050219_2,16263,TPHRSCAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16264 85.766 152.0 560050.0 25 0 70548.0 + 15196 IPEPVVRIL 9 95 518.331841401319 1034.649129869438 2 518.3320190310478 MULTI CID FTMS 0 0 0 16253 229274.40625 1.0 0 0.0 11 Unmodified _IPEPVVRIL_ ENSG00000043143|ENST00000681547|JADE2;nc|ENSG00000043143|Q9NQC1-2|JADE2;nc|ENSG00000043143|Q9NQC1-3|JADE2;nc|ENSG00000043143|Q9NQC1|JADE2 41.8396318013385 0.0653578398400075 4 {I|L}PEPVV[R{I|L}]{I|L} 9 0 + 63.47 0.0 0.0 6.1345 6.1345 91.651 0.0 0.0 0.0 50.70620374946568 2.0065945054641787 2.0065945054641787 63.47041359275458 0 0.7614393726401688 1.2218487496163564 0.3494850021680094 0.0 + + {I|L}PEPVV[R{I|L}]{I|L} 6.1345 + + 99 + 1 1.037 74160.0 1.0 11304 4958 16253 HBL1_DMSO_200M_050219_2,16264 HBL1_DMSO_200M_050219_2,16264,IPEPVVRIL True True IPEPVVRIL 85.765908 518.332019031048 2601513.0 16253.0 nc|ENSG00000043143|Q9NQC1-3|JADE2;;nc|ENSG00000043143|Q9NQC1-2|JADE2;;nc|ENSG00000043143|Q9NQC1|JADE2;;ENSG00000043143|ENST00000681547|JADE2 4.098604838053386 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16265 85.769 183.0 227240.0 25 0 63945.0 9289 FIDFQFQDS 9 67 382.8428225430761 0 382.8427917361259 PEAK CID FTMS 0 0 0 16253 226497.0 1.0 0 0.0 12 Unmodified _FIDFQFQDS_ ENSG00000147145|ENST00000614823|LPAR4 6.2057823575117 0.3444685223463735 4 {I|L} 1 8 6.9897 0.0 0.0 0.91528 0.0 0.0 531.5137873207242 116.05084406070546 647.5646313814296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.91528 + + 6 + 1 1.037 39804.4 1.0 11305 4958 16253 HBL1_DMSO_200M_050219_2,16265 HBL1_DMSO_200M_050219_2,16265,FIDFQFQDS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16266 85.778 477.0 309980.0 25 0 37662.0 + 38334 TQLGPPYHILV 11 137 619.3513647395349 1236.6881765458695 2 619.3525268435478 MULTI CID FTMS 0 0 0 16253 179073.171875 0.4826867303005847 -2 0.2130584716796875 13 Unmodified _TQLGPPYHILV_ ENSG00000119616|ENST00000341162|FCF1 103.35351024395868 0.0039835977390119 4 [QT]{I|L}G[HA]G{I|L}{I|L}TQV 12 6 + 79.944 0.0 0.0 6.4644 6.4644 79.441 0.0 0.0 0.0 13.12224652610358 12.4899983713496 12.4899983713496 3.0102999566398125 0 1.8026048219588933 1.154901959985743 0.9634679910804403 0.788106835214472 [QT]{I|L}G[HA]G{I|L}{I|L}TQV;[QT]{I|L}G[HA]{I|L}G{I|L}TQV;[QT]{I|L}G[HA]G{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]}V;[QT]{I|L}G[HQ]{I|L}{I|L}TQV;[QT]{I|L}G[HA]{I|L}GV{[QD]|[EN]|[WG]|[KD]|[RS]}V;[QT]{I|L}[HQ]G{I|L}{I|L}TQV;[QT]{I|L}G[HQ]{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]}V;[AG]T{I|L}G[HA]G{I|L}{I|L}TQV;[QT]{I|L}[HQ]{I|L}G{I|L}TQV;[QT]{I|L}G[HA]{I|L}R{[QD]|[EN]|[WG]|[KD]|[RS]}V 6.4644;6.221;6.0277;5.9297;5.7842;5.6354;5.493;5.4033;5.392;5.2496 -;-;-;-;-;-;-;-;-;- 7089 1 1.037 109050.7 1.0 11306 4958 16253 HBL1_DMSO_200M_050219_2,16266 HBL1_DMSO_200M_050219_2,16266,TQLGPPYHILV True True TQLGPPYHILV 85.777885 619.352526843548 10232255.0 16253.0 ENSG00000119616|ENST00000341162|FCF1 5.799793561299642 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16267 85.786 459.0 89380.0 25 0 8369.4 + 25553 NETWDIYL 8 73 351.8359542292153 1052.486033287846 3 351.8353759646416 MULTI CID FTMS 0 0 0 16253 173898.65625 1.0 0 0.0 14 Unmodified _NETWDIYL_ REV__CON__Q1A7A4 4.75600775471527 0.7954636275367004 4 S 1 -1 3.9903 0.0 0.0 0.37913 0.0 0.0 701.3138053599147 261.1097200983032 962.423525458218 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 S 0.37913 - 18 + 1 1.037 39910.6 1.0 11307 4958 16253 HBL1_DMSO_200M_050219_2,16267 HBL1_DMSO_200M_050219_2,16267,NETWDIYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16268 85.789 177.0 384820.0 25 0 33665.0 + 31814 RSYSYFIEV 9 91 582.2914072288382 1162.5682615244764 2 582.7924682497978 MULTI CID FTMS 0 0 0 16253 165781.78125 0.6469829592186178 -1 0.0899658203125 15 Unmodified _RSYSYFIEV_ ENSG00000183826|ENST00000481247|BTBD9;nc|ENSG00000183826|Q96Q07-2|BTBD9;nc|ENSG00000183826|Q96Q07-3|BTBD9 19.361941925380144 0.3125782356748823 4 {[QN]|[E{I|L}]|[KN]}[HN]Y{M(Oxidation (M))|F}{I|L}EV 9 4 + 33.092 0.0 0.0 2.8465 2.8465 66.091 0.0 0.0 0.0 2.924298239020633 9.974441689915444 2.924298239020633 2.924298239020633 0 0.3054621874040891 0.7695510786217261 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[HN]Y{M(Oxidation (M))|F}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[HQ]Y{M(Oxidation (M))|F}{I|L}EV 2.8465;2.5949 -;- 85 1 1.037 59185.6 1.0 11308 4958 16253 HBL1_DMSO_200M_050219_2,16268 HBL1_DMSO_200M_050219_2,16268,RSYSYFIEV False True RSYSYFIEV 85.78947 582.792468249798 3708674.25 16253.0 ENSG00000183826|ENST00000481247|BTBD9;;nc|ENSG00000183826|Q96Q07-2|BTBD9;;nc|ENSG00000183826|Q96Q07-3|BTBD9 3.798466841379801 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16269 85.793 190.0 466500.0 25 0 49249.0 + 3758 DAHGVVIVF 9 104 478.7632273524596 955.5119017717192 2 478.7637206912041 MULTI CID FTMS 0 0 0 16253 145556.328125 0.2987840295794619 -2 0.2130584716796875 16 Unmodified _DAHGVVIVF_ ENSG00000128581|ENST00000315322|IFT22;ENST00000468833.1_1_7:100959585-100959801:-|nuORF;nc|ENSG00000128581|Q9H7X7-2|IFT22;nc|ENSG00000128581|Q9H7X7-3|IFT22 25.399314129420983 0.2080152500878129 4 GVV{I|L}V{M(Oxidation (M))|F} 6 3 51.459 0.0 0.0 5.3855 0.0 0.0 323.12300307441564 0.0 323.12300307441564 0.0 34.953208540137666 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + GVV{I|L}V{M(Oxidation (M))|F} 5.3855 + + 276 1 1.037 73884.9 1.0 11309 4958 16253 HBL1_DMSO_200M_050219_2,16269 HBL1_DMSO_200M_050219_2,16269,DAHGVVIVF False True DAHGVVIVF 85.793124 478.763720691204 3711796.5 16253.0 ENST00000468833.1_1_7:100959585-100959801:-|nuORF;;ENSG00000128581|ENST00000315322|IFT22;;nc|ENSG00000128581|Q9H7X7-3|IFT22;;nc|ENSG00000128581|Q9H7X7-2|IFT22 6.20327091217041 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16270 85.808 800.0 177160.0 25 0 10827.0 -1 0 138 1058.517708985661 0 1058.516772449017 PEAK CID FTMS 0 0 0 16253 137340.765625 0.7410097712565253 -1 0.0899658203125 17 4 YYWP{I|L}[DP]D{I|L} 9 -1 17.792 0.0 0.0 0.84123 0.0 0.0 658.3064618172224 291.1098726861938 949.4163345034162 0.0 0.0 0.0 0.0 0 0.0 0.0 1.066901560044258 0.0 YYWP{I|L}[DP]D{I|L} 0.84123 - 3384 + 1 1.037 96751.0 0.6100000143051147 11310 4958 16253 HBL1_DMSO_200M_050219_2,16270 HBL1_DMSO_200M_050219_2,16270, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16271 85.815 404.0 280790.0 25 0 31869.0 22848 LRTYSLCDW 9 118 386.18771540733 1155.54131682219 3 386.1876708865166 MULTI CID FTMS 0 0 0 16253 129267.109375 0.5923140951237065 -1 0.0899658203125 18 Unmodified _LRTYSLCDW_ ENST00000534532.6_1_11:134054823-134055313:-|nuORF 15.847184025352805 0.4077185912009129 4 C{I|L}{I|L}RT{I|L} 6 7 27.447 0.0 0.0 2.3753 0.0 0.0 438.1214082301963 0.0 438.1214082301963 0.0 1.2896026157715037 0.0 0.0 0 0.0 0.0 0.6237125054200234 0.2396518287104437 C{I|L}{I|L}RT{I|L} 2.3753 - 133 + 1 1.037 93003.9 1.0 11311 4958 16253 HBL1_DMSO_200M_050219_2,16271 HBL1_DMSO_200M_050219_2,16271,LRTYSLCDW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16272 85.829 800.0 208630.0 25 0 24210.0 5440 DLPGHESL 8 160 434.2121378098446 866.4097226864892 2 434.2101013064384 MULTI CID FTMS 0 0 0 16253 114957.609375 1.0 0 0.0 19 Unmodified _DLPGHESL_ ENSG00000144867|ENST00000678299|SRPRB 12.531546534597751 0.7257836412119636 4 {I|L}D 2 7 21.454 0.0 0.0 2.4762 0.0 0.0 0.0 635.2723194500855 635.2723194500855 3.4948500216800937 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}D 2.4762 - 134 + 1 1.037 129372.8 0.4799999892711639 11312 4958 16253 HBL1_DMSO_200M_050219_2,16272 HBL1_DMSO_200M_050219_2,16272,DLPGHESL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16273 85.843 800.0 144360.0 25 0 13780.0 -1 0 128 657.3447482168516 1969.0124152507549 3 657.3457519412041 MULTI CID FTMS 0 0 0 16253 96569.3359375 0.2558426093171613 7 -0.6670074462890625 20 4 [{I|L}T]{I|L} 3 -1 29.736 0.0 0.0 1.5102 0.0 0.0 0.0 1638.774414112336 1638.774414112336 3.480811037505905 0.0 0.0 0.0 0 0.5 2.0 0.2059771852360797 0.0 [{I|L}T]{I|L} 1.5102 - 844 1 1.037 91163.2 0.6299999952316284 11313 4958 16253 HBL1_DMSO_200M_050219_2,16273 HBL1_DMSO_200M_050219_2,16273, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16275 85.848 27.0 1602400.0 25 0 163580.0 + 13920 HVYELLNTI 9 58 551.3008454868261 1100.587138040452 2 551.3007079958916 MULTI CID FTMS 0 0 0 16274 1797992.875 1.0 0 0.0 1 Unmodified _HVYELLNTI_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 39.957323273325 0.0756908302845263 4 [HV]YE{I|L}{I|L}NT{I|L} 9 0 + 60.34 0.0 0.0 5.4825 5.4825 83.568 0.0 0.0 0.0 24.003924710485904 31.66895006820745 24.003924710485904 9.208187539523747 0 0.6237125054200234 1.6989700043360187 0.0 0.0 + + [HV]YE{I|L}{I|L}NT{I|L};[HV]YE{I|L}{I|L}GGT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[WD]{I|L}{I|L}NT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[WD]{I|L}{I|L}GGT{I|L};[{I|L}T]W{[NV]|[RG]}{[HG]|PP}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[RH]{[HG]|PP}{[RE]|[WV]}N[VP];{[QV]|[N{I|L}]|[RA]|[KV]}T{[RE]|[WV]}{[HG]|PP}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.4825;4.6459;2.0751;1.2385;0.36063;0.3322;0.10026 +;-;-;-;-;-;- + 138 1 1.045 40241.7 1.0 11314 4959 16274 HBL1_DMSO_200M_050219_2,16275 HBL1_DMSO_200M_050219_2,16275,HVYELLNTI True True HVYELLNTI 85.847893 551.300707995892 32948592.0 16274.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 7.233861446380615 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16276 85.851 185.0 369920.0 25 0 37907.0 -1 LSKEMSKL 8 92 476.263280709288 950.512008485376 2 476.2634155154228 MULTI CID FTMS 0 0 0 16274 128624.171875 0.0830148488623867 4 -0.4439620971679687 2 Oxidation (M) _LSKEM(Oxidation (M))SKL_ ENSG00000115221|ENST00000283249|ITGB6;nc|ENSG00000115221|P18564-2|ITGB6 13.50788311687929 0.7113601687236069 4 [VG]V 3 -1 19.666 0.0 0.0 2.069 0.0 0.0 0.0 692.3305259016447 692.3305259016447 -0.0193449977719915 0.0 -0.0193449977719915 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VG]V 2.069 - 153 1 1.045 57912.4 1.0 11315 4959 16274 HBL1_DMSO_200M_050219_2,16276 HBL1_DMSO_200M_050219_2,16276,LSKEMSKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16277 85.853 36.0 1660100.0 25 0 220410.0 + 21055 LPAELINQI 9 82 505.79784277119705 1009.581132609194 2 505.7979614138603 MULTI CID FTMS 0 0 0 16274 1393876.25 0.1240728867416617 -2 0.2007904052734375 3 Unmodified _LPAELINQI_ ENSG00000160877|ENST00000292431|NACC1 57.47134341890925 0.0274820932774257 4 [{I|L}P]AE{I|L}{I|L}NQ{I|L} 9 0 + 48.694 0.0 0.0 4.8232 4.8232 75.932 0.0 0.0 0.0 5.070844780971058 10.330145895351848 5.070844780971058 5.070844780971058 0 0.5484550065040282 1.3979400086720375 0.5796896906561032 0.0 + + [{I|L}P]AE{I|L}{I|L}NQ{I|L};[PA]E{I|L}{I|L}{I|L}NQ{I|L};{[CP]|[EA]}P{I|L}{I|L}{I|L}NQ{I|L};[{I|L}P]AE{I|L}{I|L}GGQ{I|L};[PA]{I|L}E{I|L}{I|L}NQ{I|L};[VP][DV]{I|L}{I|L}NQ{I|L};[PA]E{I|L}{I|L}{I|L}GGQ{I|L};{[CP]|[EA]}P{I|L}{I|L}{I|L}GGQ{I|L};[PA]{I|L}E{I|L}{I|L}GGQ{I|L};[VP][DV]{I|L}{I|L}GGQ{I|L} 4.8232;4.3209;4.1627;3.9111;3.4838;3.4088;3.4088;3.2507;2.5718;2.4968 +;-;-;-;-;-;-;-;-;- + 217 1 1.045 50888.7 1.0 11316 4959 16274 HBL1_DMSO_200M_050219_2,16277 HBL1_DMSO_200M_050219_2,16277,LPAELINQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16278 85.854 54.0 1269700.0 25 0 138860.0 + 10750 FYILTSKEL 9 78 557.3133745165252 1112.6121960998505 2 557.3134643435478 MULTI CID FTMS 0 0 0 16274 845680.875 1.0 0 0.0 4 Unmodified _FYILTSKEL_ ENSG00000081320|ENST00000263955|STK17B 47.74868867922204 0.0453060283459952 4 [KS]T{I|L}{M(Oxidation (M))|F}{I|L}{I|L}[YE] 9 7 + 56.812 0.0 0.0 5.1061 5.1061 85.934 0.0 0.0 0.0 3.1234684152074976 26.105895209900687 3.1234684152074976 23.462665385619133 0 0.8494850021680094 0.0 1.8193415193665468 0.0 [KS]T{I|L}{M(Oxidation (M))|F}{I|L}{I|L}[YE];[{I|L}T][KS]{M(Oxidation (M))|F}{I|L}{I|L}[YE];[KS]TE{I|L}{I|L}{I|L}[Y{M(Oxidation (M))|F}];[KS]T{I|L}E{I|L}{I|L}[Y{M(Oxidation (M))|F}];[KS]ET{I|L}{I|L}{I|L}[Y{M(Oxidation (M))|F}];[VP][VP][PS]{I|L}{I|L}[YE];[{I|L}T][KS]E{I|L}{I|L}[Y{M(Oxidation (M))|F}] 5.1061;2.9974;2.8774;2.678;2.4906;1.9039;0.56924 -;-;-;-;-;-;- 222 1 1.045 58150.7 1.0 11317 4959 16274 HBL1_DMSO_200M_050219_2,16278 HBL1_DMSO_200M_050219_2,16278,FYILTSKEL True True FYILTSKEL 85.854037 557.313464343548 6432317.5 16274.0 ENSG00000081320|ENST00000263955|STK17B 4.642605781555176 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16279 85.856 93.0 485300.0 25 0 87144.0 + -1 KATYMYNLV 9 79 559.7811553767597 1117.5477578203192 2 559.7820312380791 MULTI CID FTMS 0 0 0 16274 458744.34375 0.944767490690418 1 -0.132843017578125 5 Oxidation (M) _KATYM(Oxidation (M))YNLV_ REV__ENSG00000198081|ENST00000651870|ZBTB14 16.942295170755138 0.3780752226737986 4 [{I|L}P]E[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}{I|L}V{I|L} 9 -1 + 44.332 0.0 0.0 3.9669 3.9669 80.778 0.0 0.0 0.0 23.01029995663981 5.123337350737245 5.123337350737245 17.501225267834 0 0.4163865622122673 1.6989700043360187 0.0 0.3054621874040891 [{I|L}P]E[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}{I|L}V{I|L};[{I|L}P]{I|L}[C(Carbamidomethyl (C))Q][{M(Oxidation (M))|F}E]V{I|L};[{I|L}P]E[C(Carbamidomethyl (C))Q][KS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}P[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}{I|L}V{I|L};[{I|L}P]{I|L}[C(Carbamidomethyl (C))Q]{[QC]|[C(Carbamidomethyl (C))A]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]{I|L}[C(Carbamidomethyl (C))Q][{M(Oxidation (M))|F}V]{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}P[KC][WM]V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))Q][HA]{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))Q][HA]V{I|L} 3.9669;2.4008;2.0243;1.9079;1.328;1.1294;0.61119;0.31674;0.0016006 -;-;-;-;-;-;-;-;- 296 1 1.045 39190.8 1.0 11318 4959 16274 HBL1_DMSO_200M_050219_2,16279 HBL1_DMSO_200M_050219_2,16279,KATYMYNLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16280 85.859 121.0 587130.0 25 0 117380.0 + 35052 SQTDFSQLL 9 109 519.7579786227658 1037.5014043123315 2 519.7588989138603 MULTI CID FTMS 0 0 0 16274 359359.34375 0.4896811176866558 -1 0.1108245849609375 6 Unmodified _SQTDFSQLL_ ENSG00000155506|ENST00000518297|LARP1;nc|ENSG00000155506|Q6PKG0-3|LARP1 51.629811660486645 0.0367964933207742 4 [AG]STD{M(Oxidation (M))|F}SQ{I|L}{I|L} 10 3 + 55.683 0.0 0.0 5.3671 5.3671 78.95 0.0 0.0 0.0 5.800111518391205 8.066884185923655 5.800111518391205 5.800111518391205 0 0.7429928190999391 1.3979400086720375 2.1989700043360187 0.0 [AG]STD{M(Oxidation (M))|F}SQ{I|L}{I|L};{[QS]|[NT]}TD{M(Oxidation (M))|F}SQ{I|L}{I|L};[AG]STD{M(Oxidation (M))|F}S[AG]{I|L}{I|L};[AG]S{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}SQ{I|L}{I|L};{[QS]|[NT]}TD{M(Oxidation (M))|F}S[AG]{I|L}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}SQ{I|L}{I|L};[C(Carbamidomethyl (C))R]D{M(Oxidation (M))|F}SQ{I|L}{I|L};[AG]S{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}S[AG]{I|L}{I|L};[AG]{M(Oxidation (M))|F}S{[ES]|[DT]|[{I|L}C]}SQ{I|L}{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}S[AG]{I|L}{I|L} 5.3671;4.808;4.4837;4.3603;3.9205;3.8012;3.6613;3.477;3.153;2.9137 -;+;-;-;-;-;-;-;-;- + 404 1 1.045 59378.6 1.0 11319 4959 16274 HBL1_DMSO_200M_050219_2,16280 HBL1_DMSO_200M_050219_2,16280,SQTDFSQLL True True SQTDFSQLL 85.858595 519.75889891386 6356826.0 16274.0 ENSG00000155506|ENST00000518297|LARP1;;nc|ENSG00000155506|Q6PKG0-3|LARP1 4.20660670598348 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16281 85.872 800.0 232950.0 25 0 10106.0 -1 0 140 1044.5069303223756 3130.498961567327 3 1044.842578113079 MULTI CID FTMS 0 0 0 16274 268476.625 0.5764539266727292 -1 0.1108245849609375 7 4 [MN]MV{I|L}QQ{I|L}M{[QC]|[C(Carbamidomethyl (C))A]}KM 13 -1 70.465 0.0 0.0 2.2509 0.0 0.0 0.0 1548.7225792464794 1548.7225792464794 36.23116760891738 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.7742275032520141 [MN]MV{I|L}QQ{I|L}M{[QC]|[C(Carbamidomethyl (C))A]}KM 2.2509 - 19809 + 1 1.045 122306.8 0.949999988079071 11320 4959 16274 HBL1_DMSO_200M_050219_2,16281 HBL1_DMSO_200M_050219_2,16281, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16282 85.876 192.0 433000.0 25 0 39706.0 + + 40935 KLIEELETL 9 107 544.3163231809731 1086.618093428746 2 544.3149291872978 MULTI CID FTMS 0 0 0 16274 229551.734375 0.917325387802322 1 -0.132843017578125 8 Unmodified _VLTGLEEITI_ nc|ENSG00000095794|Q03060-10|CREM;nc|ENSG00000095794|Q03060-7|CREM;nc|ENSG00000095794|Q03060-17|CREM;nc|ENSG00000095794|Q03060-13|CREM;nc|ENSG00000095794|Q03060-1|CREM;nc|ENSG00000095794|Q03060-16|CREM;nc|ENSG00000095794|Q03060-11|CREM;nc|ENSG00000095794|Q03060-15|CREM;nc|ENSG00000095794|Q03060-29|CREM;nc|ENSG00000095794|Q03060-19|CREM;nc|ENSG00000095794|Q03060|CREM;nc|ENSG00000095794|Q03060-30|CREM;nc|ENSG00000095794|Q03060-28|CREM;ENST00000374721.7_1_10:35500449-35500728:+|nuORF;nc|ENSG00000095794|Q03060-2|CREM;nc|ENSG00000095794|Q03060-27|CREM;nc|ENSG00000095794|Q03060-22|CREM;nc|ENSG00000095794|Q03060-12|CREM;nc|ENSG00000095794|Q03060-14|CREM;nc|ENSG00000095794|Q03060-20|CREM 52.268347100219714 0.0668375294751462 4 {[TV]|[{I|L}S]}V{I|L}AE{I|L}ET{I|L} 10 -1 + 87.674 0.0 0.0 8.0685 8.0685 79.557 0.0 0.0 0.0 7.073259432077563 16.53212513775344 7.073259432077563 0.6875876262441238 0 0.8494850021680094 1.2218487496163564 1.5356668758921828 0.0 {[TV]|[{I|L}S]}V{I|L}AE{I|L}ET{I|L};{[TV]|[{I|L}S]}V{[QG]|[NA]}K{I|L}ET{I|L};{[TV]|[{I|L}S]}V{I|L}ANKET{I|L};[{I|L}V]S{I|L}AE{I|L}ET{I|L};[{I|L}V]S{[QG]|[NA]}K{I|L}ET{I|L};[{I|L}V]S{I|L}ANKET{I|L};{[TV]|[{I|L}S]}{I|L}VAE{I|L}ET{I|L};{[TV]|[{I|L}S]}V{I|L}AE{I|L}TE{I|L};{[TV]|[{I|L}S]}{I|L}[NG]K{I|L}ET{I|L};{[TV]|[{I|L}S]}V{[QG]|[NA]}{I|L}KET{I|L} 8.0685;8.0052;7.9288;7.4176;7.3543;7.2778;7.2397;7.2385;7.1765;7.1753 -;-;-;-;-;-;-;-;-;- 2916 1 1.045 68715.3 1.0 11321 4959 16274 HBL1_DMSO_200M_050219_2,16282 HBL1_DMSO_200M_050219_2,16282,VLTGLEEITI False False KLIEELETL 85.876162 544.314929187298 1906058.5 16274.0 nc|ENSG00000095794|Q03060-10|CREM;;nc|ENSG00000095794|Q03060-7|CREM;;nc|ENSG00000095794|Q03060-17|CREM;;nc|ENSG00000095794|Q03060-13|CREM;;nc|ENSG00000095794|Q03060-1|CREM;;nc|ENSG00000095794|Q03060-16|CREM;;nc|ENSG00000095794|Q03060-11|CREM;;nc|ENSG00000095794|Q03060-15|CREM;;nc|ENSG00000095794|Q03060-29|CREM;;nc|ENSG00000095794|Q03060-19|CREM;;nc|ENSG00000095794|Q03060|CREM;;nc|ENSG00000095794|Q03060-30|CREM;;nc|ENSG00000095794|Q03060-28|CREM;;ENST00000374721.7_1_10:35500449-35500728:+|nuORF;;nc|ENSG00000095794|Q03060-2|CREM;;nc|ENSG00000095794|Q03060-27|CREM;;nc|ENSG00000095794|Q03060-22|CREM;;nc|ENSG00000095794|Q03060-12|CREM;;nc|ENSG00000095794|Q03060-14|CREM;;nc|ENSG00000095794|Q03060-20|CREM 2.485824147860209 2.0 False 9.0 True non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 16283 85.89 800.0 312650.0 25 0 39918.0 + 20227 LLDEESQMIWS 11 165 675.8175859838417 1349.6206190344833 2 675.8184081912041 MULTI CID FTMS 0 0 0 16274 208307.078125 0.3644265042606646 -1 0.1108245849609375 9 Unmodified _LLDEESQMIWS_ ENSG00000041515|ENST00000457511|MYO16;ENST00000375857.6_1_13:109445985-109707944:+|nuORF;nc|ENSG00000041515|Q9Y6X6-2|MYO16;nc|ENSG00000041515|Q9Y6X6-3|MYO16;nc|ENSG00000041515|Q9Y6X6-4|MYO16;nc|ENSG00000041515|Q9Y6X6|MYO16 51.629811660486645 0.1086041609037681 4 {I|L}{I|L}EDQ{I|L}E{I|L}VS 10 6 82.208 0.0 0.0 6.0912 0.0 0.0 0.0 206.99079309635 206.99079309635 24.318418879859024 0.0 0.0 0.0 0 1.805462187404089 2.0 1.524227503252014 0.5 {I|L}{I|L}EDQ{I|L}E{I|L}VS 6.0912 - 7971 + 1 1.045 184058.2 0.8500000238418579 11322 4959 16274 HBL1_DMSO_200M_050219_2,16283 HBL1_DMSO_200M_050219_2,16283,LLDEESQMIWS True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16284 85.893 126.0 509780.0 25 0 63057.0 + 4660 DAYVLPKLY 9 102 541.3001215762505 1080.585690219301 2 541.3032714724541 MULTI CID FTMS 0 0 0 16274 181902.609375 0.0012709609076688 22 -2.498764038085937 10 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 30.63653989081413 0.1413794767160703 4 {[MG]|[TS]}YP{I|L}PKY{I|L} 9 5 + 38.624 0.0 0.0 3.5744 3.5744 70.013 0.0 0.0 0.0 4.704999916446802 3.979400086720375 3.979400086720375 3.979400086720375 0 0.3252574989159953 0.0 0.0 0.0 {[MG]|[TS]}YP{I|L}PKY{I|L};{[MG]|[TS]}YP{I|L}PK{I|L}Y;{[MG]|[TS]}YP{I|L}KPY{I|L};{[MG]|[TS]}Y{I|L}PPKY{I|L};{[MG]|[TS]}YP{I|L}KP{I|L}Y;{[MG]|[TS]}Y{I|L}PPK{I|L}Y;[WY]V{I|L}KVHH;{[MG]|[TS]}Y{I|L}PKPY{I|L};{[MG]|[TS]}Y{I|L}PKP{I|L}Y;{[MG]|[TS]}Y{I|L}KPPY{I|L} 3.5744;3.2061;2.9275;2.6265;2.5593;2.2583;2.1198;1.9797;1.6114;1.1439 -;-;-;-;-;-;-;-;-;- 321 + 1 1.045 54932.5 1.0 11323 4959 16274 HBL1_DMSO_200M_050219_2,16284 HBL1_DMSO_200M_050219_2,16284,DAYVLPKLY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16285 85.896 163.0 541240.0 25 0 39250.0 + 9765 FMVDRVVDL 9 108 547.2882733787451 1092.56199382429 2 547.2873412966728 MULTI CID FTMS 0 0 0 16274 191365.984375 0.8213606069019539 -1 0.1108245849609375 11 Unmodified _FMVDRVVDL_ ENSG00000108384|ENST00000337432|RAD51C;ENST00000475762.5_1_17:56772326-56801433:+|nuORF;ENST00000487921.5_1_17:56769962-56783250:+|nuORF 42.312485326615175 0.0627620958981271 4 {NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}][{M(Oxidation (M))|F}V]VME 9 6 + 36.717 0.0 0.0 3.3606 3.3606 63.406 0.0 0.0 0.0 0.7200630877780867 0.7200630877780867 0.7200630877780867 0.7200630877780867 0 0.4247425010840047 1.3979400086720375 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}][{M(Oxidation (M))|F}V]VME;{M(Oxidation (M))|F}MVDRG[KQ]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]DV{[YD]|[{M(Oxidation (M))|F}M]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}][{M(Oxidation (M))|F}V]MD{I|L};{M(Oxidation (M))|F}MV[RH][YQ]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}][{M(Oxidation (M))|F}V]MVE;{M(Oxidation (M))|F}VV{M(Oxidation (M))|F}RG[KQ]{I|L};{M(Oxidation (M))|F}VMDRG[KQ]{I|L};[DV][RV][{M(Oxidation (M))|F}V]VME;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}R{[CP]|[EA]}VD{I|L} 3.3606;3.2947;2.855;2.7628;2.7549;2.7185;2.6526;2.6526;2.621;2.3129 -;-;-;-;-;-;-;-;-;- 371 1 1.045 74630.5 1.0 11324 4959 16274 HBL1_DMSO_200M_050219_2,16285 HBL1_DMSO_200M_050219_2,16285,FMVDRVVDL True True FMVDRVVDL 85.895807 547.287341296673 1404506.625 16274.0 ENST00000487921.5_1_17:56769962-56783250:+|nuORF;;ENSG00000108384|ENST00000337432|RAD51C;;ENST00000475762.5_1_17:56772326-56801433:+|nuORF 5.706311702728272 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16286 85.903 382.0 318570.0 25 0 39760.0 + 43707 YAYLPLHV 8 129 488.26793201092113 974.5213110886424 2 488.2687866091728 MULTI CID FTMS 0 0 0 16274 167257.28125 0.3993874385731624 3 -0.3595657348632812 12 Unmodified _YAYLPLHV_ ENSG00000119599|ENST00000358377|DCAF4;nc|ENSG00000119599|Q8WV16-2|DCAF4;nc|ENSG00000119599|Q8WV16-3|DCAF4;nc|ENSG00000119599|Q8WV16-4|DCAF4;nc|ENSG00000119599|Q8WV16-5|DCAF4 64.08090720244739 0.1161809961245979 4 YAY{I|L}P{I|L}HV 8 0 + 72.688 0.0 0.0 7.4589 7.4589 93.567 0.0 0.0 0.0 54.32580477356388 12.184290373512034 12.184290373512034 15.228787452803374 0 0.805462187404089 2.0 0.0 0.0 + + YAY{I|L}P{I|L}HV;YAY{I|L}VHP{I|L};YAY{I|L}P[HV]{I|L};{I|L}{I|L}[HT]{I|L}YDT;[KP]AAP{I|L}YDT;[PA][KA]P{I|L}YDT;[KP]PAA{I|L}YDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP]{[NV]|[RG]}[KQ];[{I|L}P]H[HC]{I|L}[KQ];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP]AAA[KQ] 7.4589;5.8962;5.8437;3.7488;1.5856;1.3971;1.2767;1.243;1.2107;1.1092 +;-;-;-;-;-;-;-;-;- + 461 + 1 1.045 95172.0 1.0 11325 4959 16274 HBL1_DMSO_200M_050219_2,16286 HBL1_DMSO_200M_050219_2,16286,YAYLPLHV True True YAYLPLHV 85.902651 488.268786609173 22804856.8125 16274.0 nc|ENSG00000119599|Q8WV16-2|DCAF4;;nc|ENSG00000119599|Q8WV16-5|DCAF4;;nc|ENSG00000119599|Q8WV16-3|DCAF4;;ENSG00000119599|ENST00000358377|DCAF4;;nc|ENSG00000119599|Q8WV16-4|DCAF4 8.552676995595297 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16287 85.918 800.0 152580.0 25 0 30976.0 -1 0 80 1062.459774382059 3184.3574937463773 3 1062.795336902142 MULTI CID FTMS 0 0 0 16274 122166.7578125 1.0 0 0.0 13 4 GYW 3 -1 10.177 0.0 0.0 0.3196 0.0 0.0 1612.5587399395397 1162.6210421197875 2775.1797820593274 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYW 0.3196 - 154 + 1 1.045 94297.6 0.6800000071525574 11326 4959 16274 HBL1_DMSO_200M_050219_2,16287 HBL1_DMSO_200M_050219_2,16287, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16288 85.921 195.0 238630.0 25 0 29826.0 -1 LLDVCPLTL 9 97 522.2938164657991 1042.573079998398 2 522.2937499880791 MULTI CID FTMS 0 0 0 16274 137714.875 1.0 0 0.0 14 Carbamidomethyl (C) _LLDVC(Carbamidomethyl (C))PLTL_ ENSG00000044574|ENST00000324460|HSPA5 18.13498045792455 0.3457906370836843 4 [QP][C(Carbamidomethyl (C))K][{I|L}A]{I|L}T{I|L} 9 -1 [QP][C(Carbamidomethyl (C))K][{I|L}A]{I|L} + + 19.693 -19.966 -2.4637 1.8889 1.8889 44.508 0.0 0.0 0.0 0.0 7.703037561203843 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 [QP][C(Carbamidomethyl (C))K][{I|L}A]{I|L}T{I|L} 1.8889 - 137 + 1 1.045 41940.7 1.0 11327 4959 16274 HBL1_DMSO_200M_050219_2,16288 HBL1_DMSO_200M_050219_2,16288,LLDVCPLTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16289 85.935 800.0 208420.0 25 0 24716.0 + 2261 AQFPESFTV 9 118 1025.4943456665935 1024.4870691999936 1 1025.496752917767 MULTI CID FTMS 0 0 0 16274 118847.3671875 0.5371918462324901 -3 0.323883056640625 15 Unmodified _AQFPESFTV_ ENSG00000103657|ENST00000443617|HERC1 49.55428908609986 0.0413471690215031 4 [EP]S{M(Oxidation (M))|F}TAQ{M(Oxidation (M))|F}V 9 6 + 59.466 0.0 0.0 5.8044 5.8044 73.307 0.0 0.0 0.0 5.440680443502757 11.237125054200234 5.440680443502757 1.1928031367991565 0 0.0 0.0 2.166386562212267 0.0 [EP]S{M(Oxidation (M))|F}TAQ{M(Oxidation (M))|F}V;[EP]{M(Oxidation (M))|F}STAQ{M(Oxidation (M))|F}V;{[ES]|[DT]|[{I|L}C]}P{M(Oxidation (M))|F}TAQ{M(Oxidation (M))|F}V;[EP]S{M(Oxidation (M))|F}[QA]{M(Oxidation (M))|F}TV;{[QS]|[NT]}SASTAQ{M(Oxidation (M))|F}V;[EP]{M(Oxidation (M))|F}QAS{M(Oxidation (M))|F}TV;[EP]{M(Oxidation (M))|F}S[QA]{M(Oxidation (M))|F}TV;[EP]S{M(Oxidation (M))|F}TA[AG]{M(Oxidation (M))|F}V;[EP]{M(Oxidation (M))|F}STA[AG]{M(Oxidation (M))|F}V;[EP]S{M(Oxidation (M))|F}{M(Oxidation (M))|F}[QA]TV 5.8044;5.688;5.2734;5.2273;5.1503;5.114;5.1109;4.9056;4.7892;4.7363 -;-;-;-;-;-;-;-;-;- 4684 1 1.045 110082.4 0.7099999785423279 11328 4959 16274 HBL1_DMSO_200M_050219_2,16289 HBL1_DMSO_200M_050219_2,16289,AQFPESFTV True False AQFPESFTV 85.935307 1025.49675291777 3076246.0 16274.0 ENSG00000103657|ENST00000443617|HERC1 7.580235958099365 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16290 85.946 591.0 244130.0 25 0 26239.0 + 22004 LPPPPMQYI 9 155 528.2829374527565 1054.551321972313 2 528.2833740115166 MULTI CID FTMS 0 0 0 16274 103795.8671875 0.4181270307808181 10 -1.001556396484375 16 Unmodified _LPPPPMQYI_ ENSG00000155868|ENST00000286317|MED7 56.541270873467816 0.0279970378729908 4 [{I|L}P]PPPMQY{I|L} 9 0 + 58.872 0.0 0.0 5.5826 5.5826 83.972 0.0 0.0 0.0 20.546218740408904 35.42850632646001 20.546218740408904 9.208187539523747 0 1.1861818737241734 1.6989700043360187 0.0 0.0 + + [{I|L}P]PPPMQY{I|L};[{I|L}P]PPPM[AG]Y{I|L};[{I|L}P][YK]MQY{I|L};[{I|L}P][HV]WQY{I|L};[{I|L}P]PPPM{M(Oxidation (M))|F}[SG]{I|L};{[HG]|PP}{I|L}PPMQY{I|L};[{I|L}P][YK]M[AG]Y{I|L};{[DA]|[EG]}[HV]P{I|L}QY{I|L};{[DA]|[EG]}{I|L}[HN]P{I|L}Y{I|L};[K{I|L}]YPMQY{I|L} 5.5826;4.7095;4.2094;3.8321;3.6644;3.3757;3.3311;3.256;3.0625;3.0508 +;-;-;-;-;-;-;-;-;- + 1965 1 1.045 117347.8 1.0 11329 4959 16274 HBL1_DMSO_200M_050219_2,16290 HBL1_DMSO_200M_050219_2,16290,LPPPPMQYI True True LPPPPMQYI 85.945653 528.283374011517 3222015.5 16274.0 ENSG00000155868|ENST00000286317|MED7 4.006724754969279 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16291 85.951 237.0 434790.0 25 0 62016.0 + 14692 IITKDLFQV 9 118 538.8213035299729 1075.6280541267456 2 538.8228027224541 MULTI CID FTMS 0 0 0 16274 103236.3046875 0.2274044812335438 -2 0.2007904052734375 17 Unmodified _IITKDLFQV_ ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000556139.1_1_14:102505853-102505889:+|nuORF 47.7319792270244 0.0453426645642791 4 {I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}[KT]{M(Oxidation (M))|F}QV 9 4 + 51.154 0.0 0.0 4.7557 4.7557 74.658 0.0 0.0 0.0 4.291995124882902 4.291995124882902 4.291995124882902 4.291995124882902 0 1.2302046884880935 2.0 0.0 1.7302046884880935 {I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}[KT]{M(Oxidation (M))|F}QV;{I|L}{I|L}[YN]T{I|L}{I|L}QV;{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}[KT]{M(Oxidation (M))|F}N{I|L};{I|L}{I|L}T[TA]A{I|L}{M(Oxidation (M))|F}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KT{I|L}{I|L}QV;{I|L}{I|L}T[TA]A{I|L}{M(Oxidation (M))|F}N{I|L};{I|L}{I|L}T[TA]{M(Oxidation (M))|F}A{I|L}QV;{I|L}{I|L}T{I|L}{I|L}[YN]QV;[KT]D{I|L}{M(Oxidation (M))|F}{I|L}{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}[KT]{M(Oxidation (M))|F}{I|L}{I|L}QV 4.7557;4.3567;4.2696;4.1719;3.982;3.6858;3.4456;3.3084;3.216;3.1684 -;-;-;-;-;-;-;-;-;- 943 + 1 1.045 86906.5 1.0 11330 4959 16274 HBL1_DMSO_200M_050219_2,16291 HBL1_DMSO_200M_050219_2,16291,IITKDLFQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16292 85.965 800.0 161280.0 25 0 14213.0 + 42794 VVISSDGQFAL 11 183 568.3034049009416 1134.592256868683 2 568.3039428591728 MULTI CID FTMS 0 0 0 16274 100708.9921875 0.0265971168440782 13 -1.3435211181640625 18 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 38.17557092003332 0.2405003631267018 4 VV{I|L}[WC(Carbamidomethyl (C))]Q{M(Oxidation (M))|F}A{I|L} 9 4 + 34.929 0.0 0.0 3.0785 3.0785 69.181 0.0 0.0 0.0 9.919046146754326 5.531053596994589 5.531053596994589 4.259687322722812 0 0.8296896906561033 1.5228787452803376 0.0 0.3252574989159953 VV{I|L}[WC(Carbamidomethyl (C))]Q{M(Oxidation (M))|F}A{I|L};VV{I|L}{[C(Carbamidomethyl (C))E]|[WC]}GQ{M(Oxidation (M))|F}A{I|L};{[QS]|[NT]}[DG]S{I|L}VV{M(Oxidation (M))|F}A{I|L};VVSWWQ{M(Oxidation (M))|F}A{I|L};VV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}A{I|L};VV{I|L}[WC(Carbamidomethyl (C))][AG]{M(Oxidation (M))|F}A{I|L};NP[Y{M(Oxidation (M))|F}]VRRA{I|L};{[DA]|[EG]}NSS{I|L}VV{M(Oxidation (M))|F}A{I|L};{[QS]|[NT]}WWVV{M(Oxidation (M))|F}A{I|L};VV{I|L}{[C(Carbamidomethyl (C))E]|[WC]}G[AG]{M(Oxidation (M))|F}A{I|L} 3.0785;2.7031;2.2043;2.1972;2.0939;1.9803;1.8443;1.8035;1.7252;1.6087 -;-;-;-;-;-;-;-;-;- 1821 1 1.045 101488.0 0.6000000238418579 11331 4959 16274 HBL1_DMSO_200M_050219_2,16292 HBL1_DMSO_200M_050219_2,16292,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16293 85.973 463.0 313210.0 25 0 50610.0 + 21542 LPIVTPAL 8 109 412.2681859210613 822.5218189089226 2 412.2681762576103 MULTI CID FTMS 0 0 0 16274 96260.6171875 0.1515688922234741 -3 0.323883056640625 19 Unmodified _LPIVTPAL_ ENSG00000182481|ENST00000330459|KPNA2 48.847882008758354 0.1446664477986014 4 [{I|L}P]VT{I|L} 5 3 48.302 0.0 0.0 5.8724 0.0 0.0 0.0 296.1614497002972 296.1614497002972 32.64014361800122 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.805462187404089 0.0 [{I|L}P]VT{I|L} 5.8724 - 258 1 1.045 113286.4 1.0 11332 4959 16274 HBL1_DMSO_200M_050219_2,16293 HBL1_DMSO_200M_050219_2,16293,LPIVTPAL False True LPIVTPAL 85.973309 412.26817625761 11639760.0 16274.0 ENSG00000182481|ENST00000330459|KPNA2 2.4829631249109902 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16294 85.976 131.0 910810.0 25 0 99861.0 + 15578 IPYLVVKV 8 98 465.8049888350621 929.5954247369242 2 465.8045226931572 MULTI CID FTMS 0 0 0 16274 89043.34375 0.0740267493062591 -2 0.2007904052734375 20 Unmodified _IPYLVVKV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 74.39630413441286 0.1057069479668299 4 {I|L}PY{I|L}VVKV 8 0 + 80.481 0.0 0.0 8.6576 8.6576 88.292 0.0 0.0 0.0 33.399480616943514 5.314789170422557 5.314789170422557 5.314789170422557 0 1.5 1.6989700043360187 0.0 0.2396518287104437 + + {I|L}PY{I|L}VVKV;{I|L}PY{I|L}VVVK 8.6576;8.0859 +;- + 317 + 1 1.045 95547.3 1.0 11333 4959 16274 HBL1_DMSO_200M_050219_2,16294 HBL1_DMSO_200M_050219_2,16294,IPYLVVKV True True IPYLVVKV 85.975965 465.804522693157 20294618.0 16274.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 4.370109081268311 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16296 85.981 20.0 2754200.0 25 0 414860.0 -1 ALMAAPLSL 9 70 451.75274496202985 901.4909369908596 2 451.7529785037041 MULTI CID FTMS 0 0 0 16295 2837866.0 0.2185087834591974 45 -4.7869873046875 1 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 61.321 0.0 0.0 6.8022 6.8022 80.736 0.0 0.0 0.0 14.17680179738202 8.384767769392738 8.384767769392738 3.0102999566398125 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[PS]{M(Oxidation (M))|F}APS{I|L}A{I|L} 6.8022;6.4683;5.2296;4.8957;4.8668;4.5269;4.3376;3.9783;3.9202;3.5862 -;-;-;-;-;-;-;-;-;- 143 1 1.052 47079.7 1.0 11334 4960 16295 HBL1_DMSO_200M_050219_2,16296 HBL1_DMSO_200M_050219_2,16296,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16297 85.982 56.0 714550.0 25 0 74956.0 + 10695 FVVEHDFIMA 10 66 604.2946204424379 1206.5746879516755 2 604.2950317263603 MULTI CID FTMS 0 0 0 16295 705124.1875 0.4553459745464455 1 -0.1067276000976562 2 Unmodified _FVVEHDFIMA_ ENSG00000164163|ENST00000296577|ABCE1;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000510321.1_1_4:146044588-146044753:+|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF 19.256988751693697 0.5244284437930726 4 [HD]{M(Oxidation (M))|F}EVV{M(Oxidation (M))|F}{I|L}MA 10 5 + 40.764 0.0 0.0 3.3785 3.3785 66.317 0.0 0.0 0.0 4.259687322722812 27.57689482423952 4.259687322722812 2.218487496163561 0 0.6150219788552205 0.0 0.0 0.0 [HD]{M(Oxidation (M))|F}EVV{M(Oxidation (M))|F}{I|L}MA;[HD]{M(Oxidation (M))|F}{I|L}DV{M(Oxidation (M))|F}{I|L}MA;[HD]{M(Oxidation (M))|F}EVV{I|L}{M(Oxidation (M))|F}MA;[HD]{M(Oxidation (M))|F}EV{M(Oxidation (M))|F}V{I|L}MA;[HD]{M(Oxidation (M))|F}{I|L}DV{I|L}{M(Oxidation (M))|F}MA;[HD]{M(Oxidation (M))|F}{I|L}VD{M(Oxidation (M))|F}{I|L}MA;[HD]{M(Oxidation (M))|F}EV{I|L}V{M(Oxidation (M))|F}MA;[HD]{M(Oxidation (M))|F}{I|L}D{M(Oxidation (M))|F}V{I|L}MA;[HD]{M(Oxidation (M))|F}{I|L}D{I|L}V{M(Oxidation (M))|F}MA;[HD]{M(Oxidation (M))|F}EV{I|L}{M(Oxidation (M))|F}VMA 3.3785;3.1947;2.9831;2.8795;2.7992;2.7992;2.7336;2.6957;2.5497;2.4841 -;-;-;-;-;-;-;-;-;- 370 1 1.052 33507.7 1.0 11335 4960 16295 HBL1_DMSO_200M_050219_2,16297 HBL1_DMSO_200M_050219_2,16297,FVVEHDFIMA False True FVVEHDFIMA 85.982065 604.29503172636 27373444.0 16295.0 ENST00000510321.1_1_4:146044588-146044753:+|nuORF;;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;;ENST00000515678.5_1_4:146042303-146044753:+|nuORF;;ENSG00000164163|ENST00000296577|ABCE1 8.236305554707846 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16298 85.983 35.0 1650300.0 25 0 171960.0 + 22285 LPRTIFPTSTI 11 87 623.3642607329433 1244.7139685326863 2 623.3640624880791 MULTI CID FTMS 0 0 0 16295 1568148.75 0.9298137962117684 -1 0.132843017578125 3 Unmodified _LPRTIFPTSTI_ ENSG00000139218|ENST00000369367|SCAF11;ENST00000546534.1_1_12:46325244-46326951:-|nuORF 47.7319792270244 0.130190323903946 4 [TP][R{I|L}]{I|L}{M(Oxidation (M))|F}[TP]ST{I|L} 11 2 + 60.868 0.0 0.0 4.8901 4.8901 69.362 0.0 0.0 0.0 1.1655797807238386 15.07062321345802 1.1655797807238386 1.1655797807238386 0 1.3807196863200843 1.0 1.6382104921644451 0.0 [TP][R{I|L}]{I|L}{M(Oxidation (M))|F}[TP]ST{I|L};[{I|L}T][RP]{I|L}{M(Oxidation (M))|F}[TP]ST{I|L};[TP][R{I|L}]{M(Oxidation (M))|F}{I|L}[TP]ST{I|L};[{I|L}T][RP]{M(Oxidation (M))|F}{I|L}[TP]ST{I|L};[TP][R{I|L}]{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}DT{I|L};[{I|L}T][RP]{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}DT{I|L};[TP][R{I|L}]{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}DT{I|L};[{I|L}T][RP]{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}DT{I|L};[TP][R{I|L}]{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}SE{I|L};[{I|L}T][RP]{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}SE{I|L} 4.8901;4.7965;4.6483;4.5546;4.1655;4.0719;3.9237;3.8301;3.2207;3.127 -;-;-;-;-;-;-;-;-;- 424 1 1.052 47615.7 1.0 11336 4960 16295 HBL1_DMSO_200M_050219_2,16298 HBL1_DMSO_200M_050219_2,16298,LPRTIFPTSTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16299 85.984 45.0 1293300.0 25 0 136670.0 + + 10357 LPRVTPFYAV 10 90 581.8347646920276 1161.6549764508552 2 581.8346435427666 MULTI CID FTMS 0 0 0 16295 1064952.125 0.5392845296873022 -3 0.3336334228515625 4 Unmodified _FSKGAKLQNAV_ ENSG00000115758|ENST00000234111|ODC1 15.248480904072842 0.7179608125786238 4 M{I|L}YAV 5 -1 39.949 0.0 0.0 3.4389 0.0 0.0 566.3537113940575 0.0 566.3537113940575 0.0 14.262137858390815 0.0 0.0 0 0.5 0.0 0.0 0.0 M{I|L}YAV 3.4389 - 87 1 1.052 49746.7 1.0 11337 4960 16295 HBL1_DMSO_200M_050219_2,16299 HBL1_DMSO_200M_050219_2,16299,FSKGAKLQNAV False False LPRVTPFYAV 85.984492 581.834643542767 59348912.0 16295.0 ENSG00000115758|ENST00000234111|ODC1 7.369234879811604 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16300 85.986 62.0 935420.0 25 0 150020.0 + 3826 DAIRVFANI 9 86 509.7862494498553 0 509.7856323122978 PEAK CID FTMS 0 0 0 16295 548271.75 0.8579730476875013 -1 0.132843017578125 5 Unmodified _DAIRVFANI_ ENSG00000100129|ENST00000652021|EIF3L;ENST00000495197.1_1_10:38368986-38369799:-|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L 47.594388314883695 0.0382481814706656 4 DA{M(Oxidation (M))|F}V 4 6 26.938 0.0 0.0 2.6473 0.0 0.0 130.10598904023817 452.2269686334594 582.3329576736976 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 DA{M(Oxidation (M))|F}V 2.6473 - 79 + 1 1.052 51645.3 1.0 11338 4960 16295 HBL1_DMSO_200M_050219_2,16300 HBL1_DMSO_200M_050219_2,16300,DAIRVFANI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16301 85.988 62.0 915810.0 25 0 117120.0 + 19513 RILAEEPIYI 10 78 608.8543802558145 1215.6942075784289 2 608.8510009646416 MULTI CID FTMS 0 0 0 16295 528738.0 1.0 0 0.0 6 Unmodified _LFLSKIGYYL_ nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF 25.399314129420983 0.3980215340001851 4 EEP{I|L}Y{I|L} 6 7 43.136 0.0 0.0 3.5483 0.0 0.0 453.3103199689469 0.0 453.3103199689469 0.0 24.350781693192967 0.0 0.0 0 0.5 0.0 0.0 0.0 EEP{I|L}Y{I|L} 3.5483 - 92 1 1.052 46747.0 1.0 11339 4960 16295 HBL1_DMSO_200M_050219_2,16301 HBL1_DMSO_200M_050219_2,16301,LFLSKIGYYL False False RILAEEPIYI 85.987544 608.851000964642 4093676.5 16295.0 nc|ENSG00000022556|Q9NX02-4|NLRP2;;nc|ENSG00000022556|Q9NX02-3|NLRP2;;nc|ENSG00000022556|Q9NX02-2|NLRP2;;nc|ENSG00000022556|Q9NX02-5|NLRP2;;ENSG00000022556|ENST00000448584|NLRP2;;ENST00000540597.5_1_19:55476735-55501561:+|nuORF 3.631575504938761 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16302 85.99 132.0 504300.0 25 0 98268.0 + 17771 KQFEPNDFYL 10 68 650.8141629345582 1299.6137729359164 2 650.8143798708916 MULTI CID FTMS 0 0 0 16295 400201.375 0.3174624154983317 -2 0.2436676025390625 7 Unmodified _KQFEPNDFYL_ ENSG00000101126|ENST00000621696|ADNP 47.594388314883695 0.0942698883389255 4 [NP]D{M(Oxidation (M))|F}E[KQ]{M(Oxidation (M))|F}Y{I|L} 10 6 + 59.966 0.0 0.0 4.6141 4.6141 77.265 0.0 0.0 0.0 7.134635813384392 16.53212513775344 7.134635813384392 7.134635813384392 0 0.5 0.0 0.8807196863200843 0.7742275032520141 [NP]D{M(Oxidation (M))|F}E[KQ]{M(Oxidation (M))|F}Y{I|L};[KQ]{M(Oxidation (M))|F}EYY{M(Oxidation (M))|F}Y{I|L};YY{M(Oxidation (M))|F}E[KQ]{M(Oxidation (M))|F}Y{I|L};[Y{M(Oxidation (M))|F}]YE[KQ]{M(Oxidation (M))|F}Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NP]Y[H{I|L}]{M(Oxidation (M))|F}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}[H{I|L}]Y[NP]C{I|L};[NP]D{M(Oxidation (M))|F}[RP]{[{M(Oxidation (M))|F}D]|MM}[RH];YY{M(Oxidation (M))|F}[RP]{[{M(Oxidation (M))|F}D]|MM}[RH];[Y{M(Oxidation (M))|F}]Y[RP]{[{M(Oxidation (M))|F}D]|MM}[RH];YY{M(Oxidation (M))|F}[RP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 4.6141;4.0651;3.8426;3.5364;2.3118;2.0365;1.2456;0.47409;0.16789;0.10355 -;-;-;-;-;-;-;-;-;- 279 1 1.052 55459.4 1.0 11340 4960 16295 HBL1_DMSO_200M_050219_2,16302 HBL1_DMSO_200M_050219_2,16302,KQFEPNDFYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16303 85.993 114.0 441230.0 25 0 46936.0 + 17942 KQYEEFYVGL 10 77 638.3168339611557 1274.6191149891113 2 638.3181640505791 MULTI CID FTMS 0 0 0 16295 398881.9375 0.3711833108835893 1 -0.1067276000976562 8 Unmodified _KQYEEFYVGL_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 36.506200033944 0.1944608063770638 4 [YE]E{M(Oxidation (M))|F}[KQ]YVG{I|L} 10 4 + 74.213 0.0 0.0 5.8224 5.8224 56.001 0.0 0.0 0.0 7.269987279362624 61.73902187720806 7.269987279362624 0.0 0 1.3494850021680094 0.0 0.805462187404089 0.4247425010840047 [YE]E{M(Oxidation (M))|F}[KQ]YVG{I|L};[YE]E[KQ]{M(Oxidation (M))|F}YVG{I|L};[YE]E{M(Oxidation (M))|F}Y[KQ]VG{I|L};[KA]{[DS]|[MA]|[CV]|TT}[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}YVG{I|L};{[VA]|[{I|L}G]}[KC][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}YR{I|L};[KA][DP]{[YC]|[HE]}{M(Oxidation (M))|F}YR{I|L};[KA]{[DS]|[MA]|[CV]|TT}[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}YR{I|L};[{I|L}T][Y{M(Oxidation (M))|F}]{[WN]|[YH]}YR{I|L};[PA]N{[QN]|[E{I|L}]|[KN]}{[WN]|[YH]}YR{I|L} 5.8224;5.8224;5.253;3.8465;3.6603;2.8137;2.6396;2.0125;1.8726 -;-;-;-;-;-;-;-;- 400 1 1.052 43669.5 1.0 11341 4960 16295 HBL1_DMSO_200M_050219_2,16303 HBL1_DMSO_200M_050219_2,16303,KQYEEFYVGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16304 85.997 247.0 506590.0 25 0 89436.0 + 18602 LADTASFCI 9 95 470.7264787384386 939.4384045436772 2 470.7264892458916 MULTI CID FTMS 0 0 0 16295 340778.84375 0.1715857174973918 2 -0.2267227172851562 9 Unmodified _LADTASFCI_ REV__ENSG00000112494|ENST00000230256|UNC93A;REV__nc|ENSG00000112494|Q86WB7-2|UNC93A 23.1484247019978 0.2366544122328345 4 {I|L}A 2 -1 42.959 0.0 0.0 4.5728 0.0 0.0 0.0 752.2945998341066 752.2945998341066 26.69974030847176 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}A 4.5728 + + 70 + 1 1.052 100342.4 1.0 11342 4960 16295 HBL1_DMSO_200M_050219_2,16304 HBL1_DMSO_200M_050219_2,16304,LADTASFCI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16305 86.0 112.0 754040.0 25 0 92424.0 1692 ALPHDTAIS 9 102 462.744003502894 0 462.7442199587822 PEAK CID FTMS 0 0 0 16295 326772.78125 0.1248040226487754 19 -2.083465576171875 10 Unmodified _ALPHDTAIS_ ENSG00000111783|ENST00000392842|RFX4;nc|ENSG00000111783|Q33E94-2|RFX4;nc|ENSG00000111783|Q33E94-3|RFX4 16.942295170755138 0.2326366549411506 4 PP 2 8 12.831 0.0 0.0 1.3894 0.0 0.0 184.12113730847585 542.2209566705686 726.3420939790444 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PP 1.3894 - 15 + 1 1.052 70077.2 1.0 11343 4960 16295 HBL1_DMSO_200M_050219_2,16305 HBL1_DMSO_200M_050219_2,16305,ALPHDTAIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16306 86.001 61.0 964400.0 25 0 86542.0 + -1 HVLPELLVTA 10 93 545.8225077021767 1089.6304624711534 2 546.3257324099541 MULTI CID FTMS 0 0 0 16295 318656.8125 0.7319469553658859 -1 0.132843017578125 11 Oxidation (M) _VFKLIPM(Oxidation (M))LN_ ENSG00000129566|ENST00000262715|TEP1;nc|ENSG00000129566|Q99973-2|TEP1 20.453626601364224 0.2830276176381075 4 {I|L}{I|L}[WY]{I|L}{I|L}V[NG] 9 -1 + 24.103 0.0 0.0 2.212 2.212 64.784 0.0 0.0 0.0 2.552725051033065 3.467874862246564 2.552725051033065 2.552725051033065 0 0.0 1.3979400086720375 0.0 0.0 {I|L}{I|L}[WY]{I|L}{I|L}V[NG];[HV]{I|L}[EP]{I|L}{I|L}V[NG];[{M(Oxidation (M))|F}V]K{I|L}[NS]{I|L}V[NG];[DP]{I|L}[H{I|L}]{I|L}{I|L}V[NG];[{M(Oxidation (M))|F}V]K{I|L}{I|L}[NS]V[NG];{I|L}{I|L}CCKK{I|L}V[NG];[{M(Oxidation (M))|F}V]K{I|L}[WK]V[NG];[{M(Oxidation (M))|F}V]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}R{I|L}TV;{I|L}{I|L}[EP][HV]{I|L}V[NG];{I|L}{I|L}[WY]{I|L}[VG]{[QV]|[N{I|L}]|[RA]|[KV]} 2.212;1.9777;1.471;1.3944;1.0331;0.92906;0.87153;0.86555;0.8144;0.76746 -;-;-;-;-;-;-;-;-;- 484 1 1.052 51114.0 1.0 11344 4960 16295 HBL1_DMSO_200M_050219_2,16306 HBL1_DMSO_200M_050219_2,16306,VFKLIPMLN False False HVLPELLVTA 86.001125 546.325732409954 3976613.25 16295.0 ENSG00000129566|ENST00000262715|TEP1;;nc|ENSG00000129566|Q99973-2|TEP1 4.373170534769694 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16307 86.004 122.0 274800.0 25 0 31155.0 + 9427 FLADPSAFVAA 11 58 554.7876547909145 1107.560756648629 2 554.7877075076103 MULTI CID FTMS 0 0 0 16295 287031.71875 0.5900756567624487 1 -0.1067276000976562 12 Unmodified _FLADPSAFVAA_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000496593.5_1_11:61404148-61405105:+|nuORF;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 19.256988751693697 0.6345794173041263 4 {[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}W{I|L}{M(Oxidation (M))|F}Q{I|L} 9 8 + 34.261 0.0 0.0 3.0934 3.0934 75.733 0.0 0.0 0.0 10.558481052291675 21.787202972859923 10.558481052291675 9.208187539523756 0 0.0682503180159344 1.5228787452803376 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}W{I|L}{M(Oxidation (M))|F}Q{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}Q{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}V{[CP]|[EA]}{M(Oxidation (M))|F}Q{I|L};{[VA]|[{I|L}G]}[MT]{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}Q{I|L};{[VA]|[{I|L}G]}[MT]V{[CP]|[EA]}{M(Oxidation (M))|F}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Y{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[PS]{[CP]|[EA]}{M(Oxidation (M))|F}Q{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[PS]{[CP]|[EA]}{M(Oxidation (M))|F}Q{I|L} 3.0934;2.262;2.262;1.6277;1.6277;1.2067;1.0841;0.88704 -;-;-;-;-;-;-;- 96 1 1.052 35055.4 1.0 11345 4960 16295 HBL1_DMSO_200M_050219_2,16307 HBL1_DMSO_200M_050219_2,16307,FLADPSAFVAA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16308 86.018 800.0 258700.0 25 0 35439.0 + -1 YLEDGFAYV 9 124 1076.1359652935369 3225.3860664808108 3 1076.470507800579 MULTI CID FTMS 0 0 0 16295 262908.25 0.1646437795614845 4 -0.37139892578125 13 ENST00000419977.4_1_6:57182469-57246993:+|nuORF;ENST00000490313.1_1_6:57244770-57299810:+|nuORF;ENSG00000146143|ENST00000615550|PRIM2 4 [Y{I|L}]EDG{M(Oxidation (M))|F}AYV 9 -1 30.772 0.0 0.0 0.95406 0.0 0.0 0.0 2164.871270908798 2164.871270908798 15.883570883603843 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.7742275032520141 0.0 [Y{I|L}]EDG{M(Oxidation (M))|F}AYV 0.95406 - 3055 1 1.052 155773.6 0.9100000262260436 11346 4960 16295 HBL1_DMSO_200M_050219_2,16308 HBL1_DMSO_200M_050219_2,16308, False False YLEDGFAYV 86.017527 1076.47050780058 4395794.0 16295.0 ENST00000419977.4_1_6:57182469-57246993:+|nuORF;;ENST00000490313.1_1_6:57244770-57299810:+|nuORF;;ENSG00000146143|ENST00000615550|PRIM2 3.048218250274658 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16309 86.024 344.0 592390.0 25 0 39570.0 + 10731 FYFDRDDVAL 10 145 630.798437975599 1259.582323017998 2 630.7986938357353 MULTI CID FTMS 0 0 0 16295 238294.046875 0.3106710402997535 -1 0.132843017578125 14 Unmodified _FYFDRDDVAL_ ENSG00000087086|ENST00000331825|FTL 59.05245873256422 0.0390717477387156 4 {M(Oxidation (M))|F}Y{M(Oxidation (M))|F}D[Q{I|L}]{M(Oxidation (M))|F}PA{I|L} 10 4 + 45.415 0.0 0.0 3.6056 3.6056 67.941 0.0 0.0 0.0 11.24471838015915 1.6232778524297302 1.6232778524297302 2.966651902615304 0 1.424742501084005 0.0 0.2396518287104437 0.0 {M(Oxidation (M))|F}Y{M(Oxidation (M))|F}D[Q{I|L}]{M(Oxidation (M))|F}PA{I|L};{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}DG[{I|L}A]{M(Oxidation (M))|F}PA{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}YD[Q{I|L}]{M(Oxidation (M))|F}PA{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}WW{M(Oxidation (M))|F}PA{I|L};[QA]HW{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}VA{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}VA{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}YDG[{I|L}A]{M(Oxidation (M))|F}PA{I|L};[VS]{I|L}{M(Oxidation (M))|F}[WD]{M(Oxidation (M))|F}YA{I|L};[VS]{I|L}{M(Oxidation (M))|F}[WD]Y{M(Oxidation (M))|F}A{I|L};[KA]H{[DA]|[EG]}{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}VA{I|L} 3.6056;3.37;2.8391;2.7985;2.7085;2.6117;2.6036;2.5514;2.4116;2.398 -;-;-;-;-;-;-;-;-;- 1324 + 1 1.052 152154.3 1.0 11347 4960 16295 HBL1_DMSO_200M_050219_2,16309 HBL1_DMSO_200M_050219_2,16309,FYFDRDDVAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16310 86.026 127.0 661260.0 25 0 42508.0 + 2359 AQLPMSIRI 9 127 514.7999422004657 1027.5853314677313 2 514.7998535037041 MULTI CID FTMS 0 0 0 16295 196747.28125 0.3907845692086801 1 -0.1067276000976562 15 Unmodified _AQLPMSIRI_ ENSG00000116017|ENST00000263620|ARID3A;ENST00000590749.2_19:966789-968568:+|nuORF 20.41453444215458 0.284085796332423 4 [QA]{I|L}PM[RV]T{I|L} 9 3 + 34.843 0.0 0.0 3.3908 3.3908 74.324 0.0 0.0 0.0 13.996995041329708 10.902887499330738 10.902887499330738 8.482587709797333 0 0.9247425010840048 0.0 0.2742275032520141 0.0 [QA]{I|L}PM[RV]T{I|L};[QA]{I|L}P[YR][PA]{I|L};[QA]{I|L}PM[R{I|L}]S{I|L};[QA]{I|L}PM[R{I|L}]TV 3.3908;2.5653;2.2451;0.9108 -;-;-;- 61 + 1 1.052 69239.0 1.0 11348 4960 16295 HBL1_DMSO_200M_050219_2,16310 HBL1_DMSO_200M_050219_2,16310,AQLPMSIRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16311 86.036 562.0 359620.0 25 0 37838.0 + 24750 MPFKCMQL 8 177 499.23709946702127 996.4596460008426 2 499.2370788455009 MULTI CID FTMS 0 0 0 16295 193165.109375 0.6451780191114654 -1 0.132843017578125 16 Unmodified _MPFKCMQL_ ENSG00000188846|ENST00000396203|RPL14;ENST00000465280.1_1_3:40499395-40500228:+|nuORF;ENST00000481798.1_1_3:40499446-40503006:+|nuORF 63.562846038646086 0.116059504757595 4 MP{M(Oxidation (M))|F} 3 5 48.486 0.0 0.0 4.8658 0.0 0.0 0.0 618.2760737034561 618.2760737034561 11.155991110524106 0.0 0.0 0.0 0 0.6803115997617928 1.6989700043360187 0.0 0.0 + MP{M(Oxidation (M))|F} 4.8658 + + 2071 + 1 1.052 153277.3 1.0 11349 4960 16295 HBL1_DMSO_200M_050219_2,16311 HBL1_DMSO_200M_050219_2,16311,MPFKCMQL True True MPFKCMQL 86.03623 499.237078845501 5975460.0 16295.0 ENST00000465280.1_1_3:40499395-40500228:+|nuORF;;ENST00000481798.1_1_3:40499446-40503006:+|nuORF;;ENSG00000188846|ENST00000396203|RPL14 4.161096493403117 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16312 86.041 201.0 389040.0 25 0 28202.0 + 38379 TQVTALIKL 9 106 493.8165967481621 985.6186405631242 2 493.8160888552666 MULTI CID FTMS 0 0 0 16295 172969.546875 1.0 0 0.0 17 Unmodified _TQVTALIKL_ ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC 19.361941925380144 0.3125782356748823 4 [Y{I|L}]C(Carbamidomethyl (C)) 3 8 21.427 0.0 0.0 2.1739 0.0 0.0 0.0 546.424950948143 546.424950948143 1.3644658696151026 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}]C(Carbamidomethyl (C)) 2.1739 - 395 1 1.052 63895.4 1.0 11350 4960 16295 HBL1_DMSO_200M_050219_2,16312 HBL1_DMSO_200M_050219_2,16312,TQVTALIKL False True TQVTALIKL 86.041229 493.816088855267 1461834.125 16295.0 nc|ENSG00000078618|O43847-2|NRDC;;ENSG00000078618|ENST00000352171|NRDC 2.7975523471832275 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16313 86.055 800.0 186750.0 25 0 16430.0 + 2336 AQLDPLFERV 10 151 593.3218536391662 1184.6291543451323 2 594.3240844607353 MULTI CID FTMS 0 0 0 16295 173579.84375 1.0 0 0.0 18 Unmodified _AQLDREAQVR_ ENSG00000159884|ENST00000426546|CCDC107;nc|ENSG00000159884|Q8WV48-5|CCDC107 13.042465956692816 0.6287021003332052 4 [VS][YK][KG]PD{I|L} 9 10 21.378 0.0 0.0 1.8046 0.0 0.0 0.0 194.06678004915327 194.06678004915327 1.099615346615792 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.3807196863200844 [VS][YK][KG]PD{I|L} 1.8046 - 661 1 1.052 112446.6 0.7400000095367432 11351 4960 16295 HBL1_DMSO_200M_050219_2,16313 HBL1_DMSO_200M_050219_2,16313,AQLDREAQVR False False AQLDPLFERV 86.055061 594.324084460735 1605836.375 16295.0 ENSG00000159884|ENST00000426546|CCDC107;;nc|ENSG00000159884|Q8WV48-5|CCDC107 6.508159319559733 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16314 86.069 800.0 202040.0 25 0 21733.0 + 12632 GVLAHTILGV 10 180 490.3016034249917 978.5886539167832 2 490.3006774783134 MULTI CID FTMS 0 0 0 16295 157956.84375 1.0 0 0.0 19 Unmodified _GVLAHTILGV_ ENSG00000109775|ENST00000264689|UFSP2;ENST00000510206.5_1_4:186321548-186327081:-|nuORF 60.38955033654506 0.0355643171799535 4 [VP][EP]R{I|L}{I|L}R 8 7 + 45.928 0.0 0.0 4.6933 4.6933 75.532 0.0 0.0 0.0 5.1851393987788725 9.262137858390808 5.1851393987788725 5.1851393987788725 0 0.3054621874040891 1.3979400086720375 1.1549471895720984 0.0 [VP][EP]R{I|L}{I|L}R;[{I|L}A]HTR{I|L}{I|L}R;[VP][EP]{I|L}R{I|L}R;[VG]{I|L}[HA]T{I|L}{I|L}R;[VP][EP]{I|L}GV{I|L}R;[VP][EP][VG]{I|L}{I|L}R;[{I|L}P]PDR{I|L}{I|L}R;[{I|L}A]HT{I|L}R{I|L}R;[{I|L}T][HA]R{I|L}{I|L}R;[DP][{I|L}P]R{I|L}{I|L}R 4.6933;4.1634;4.1288;3.8732;3.8679;3.7468;3.6205;3.5989;3.541;3.5382 -;-;-;-;-;-;-;-;-;- 1158 1 1.052 123332.4 0.6700000166893005 11352 4960 16295 HBL1_DMSO_200M_050219_2,16314 HBL1_DMSO_200M_050219_2,16314,GVLAHTILGV True True GVLAHTILGV 86.068877 490.300677478313 1139986.625 16295.0 ENST00000510206.5_1_4:186321548-186327081:-|nuORF;;ENSG00000109775|ENST00000264689|UFSP2 6.504900137583415 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16315 86.083 800.0 143980.0 25 0 10267.0 + 1932 AMINRFQFV 9 148 563.2978010698591 1124.5810492065182 2 563.2975952029228 MULTI CID FTMS 0 0 0 16295 151547.921875 1.0 0 0.0 20 Unmodified _AMINRFQFV_ ENSG00000134759|ENST00000358232|ELP2;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 64.23631603340823 0.0237365939569086 4 {[VA]|[{I|L}G]}EPV[WQ]{I|L}[PS] 10 8 + 33.632 0.0 0.0 2.9906 2.9906 61.806 0.0 0.0 0.0 1.926905208751436 0.791812460476244 0.791812460476244 0.4139268515822465 0 0.4247425010840047 0.958607314841775 0.0 0.7614393726401688 {[VA]|[{I|L}G]}EPV[WQ]{I|L}[PS];{[VA]|[{I|L}G]}EPV{[TV]|[{I|L}S]}N{I|L}[PS];{[VA]|[{I|L}G]}Y[QT]{I|L}GQ{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}APV[WQ]{I|L}[PS];{NN|[MP]|[D{I|L}]|[EV]}APV{[TV]|[{I|L}S]}N{I|L}[PS];[VG]Y{I|L}{[WN]|[YH]}Q{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}A[YQ]{I|L}GQ{M(Oxidation (M))|F}V;{[VA]|[{I|L}G]}EP[W{I|L}]N{I|L}[PS];{[VA]|[{I|L}G]}T[YQ]{I|L}GQ{M(Oxidation (M))|F}V;[EP]AVV[WQ]{I|L}[PS] 2.9906;2.9538;2.8618;2.8193;2.7825;2.65;2.4271;2.3691;2.36;2.2142 -;-;-;-;-;-;-;-;-;- 1538 1 1.052 94370.7 0.6800000071525574 11353 4960 16295 HBL1_DMSO_200M_050219_2,16315 HBL1_DMSO_200M_050219_2,16315,AMINRFQFV True True AMINRFQFV 86.082708 563.297595202923 1141993.25 16295.0 nc|ENSG00000134759|Q6IA86-7|ELP2;;nc|ENSG00000134759|Q6IA86-3|ELP2;;nc|ENSG00000134759|Q6IA86-4|ELP2;;nc|ENSG00000134759|Q6IA86-5|ELP2;;ENSG00000134759|ENST00000358232|ELP2;;nc|ENSG00000134759|Q6IA86-6|ELP2;;nc|ENSG00000134759|Q6IA86-2|ELP2 6.827140808105469 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16317 86.087 14.0 6058400.0 25 0 1231400.0 + 25713 NIIELVHQV 9 90 532.8093713617271 1063.6041897902542 2 532.8090087771416 MULTI CID FTMS 0 0 0 16316 3722346.5 0.942762640188697 1 -0.1199951171875 1 Unmodified _NIIELVHQV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 69.10491478415734 0.0214449631113747 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VH{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 79.389 0.0 0.0 7.4641 7.4641 94.402 0.0 0.0 0.0 45.64204044100904 16.333443148083937 16.333443148083937 21.026909627198407 0 1.174742501084005 2.0 0.3807196863200844 1.341129063296272 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VH{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]} 7.4641;5.4872 +;- + 716 + 1 1.058 68478.9 1.0 11354 4961 16316 HBL1_DMSO_200M_050219_2,16317 HBL1_DMSO_200M_050219_2,16317,NIIELVHQV True True NIIELVHQV 86.087366 532.809008777142 100980348.0 16316.0 chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;;nc|ENSG00000165025|P43405-2|SYK;;ENSG00000165025|ENST00000375754|SYK 7.290816148122151 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16318 86.089 15.0 6327700.0 25 0 436180.0 + 22262 LPRLTPPVL 9 93 503.32679011973016 1004.6390273062603 2 503.3270141482353 MULTI CID FTMS 0 0 0 16316 3568176.5 0.2432749695461121 -6 0.6879043579101562 2 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 58.6788170122104 0.0268135626297836 4 [{I|L}P]T{I|L}RPPV{I|L} 9 2 + 77.819 0.0 0.0 7.746 7.746 79.571 0.0 0.0 0.0 12.956349637772746 47.93182501400722 12.956349637772746 1.020599913279625 0 0.8494850021680094 1.5228787452803376 1.5044321917401078 0.0 [{I|L}P]T{I|L}RPPV{I|L};[{I|L}P]TR{I|L}PPV{I|L};[{I|L}P]RT{I|L}PPV{I|L};[{I|L}P]TRP{I|L}PV{I|L};[{I|L}P]RTP{I|L}PV{I|L};[{I|L}P]TRPP{I|L}V{I|L};[{I|L}P]RTPP{I|L}V{I|L};[{I|L}P]TRPPV{I|L}{I|L};[{I|L}P]RTPPV{I|L}{I|L};[VP]P[R{I|L}]PT{I|L}{I|L} 7.746;7.6444;7.5962;6.4992;6.451;5.0982;5.0499;3.8342;3.786;3.169 -;-;-;-;-;-;-;-;-;- 626 1 1.058 77687.5 1.0 11355 4961 16316 HBL1_DMSO_200M_050219_2,16318 HBL1_DMSO_200M_050219_2,16318,LPRLTPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16319 86.09 32.0 1507900.0 25 0 328870.0 + 15544 IPWGPASI 8 72 420.73445722342944 839.4543615136589 2 420.7344848513603 MULTI CID FTMS 0 0 0 16316 1763931.875 1.0 0 0.0 3 Unmodified _IPWGPASI_ ENSG00000037042|ENST00000251412|TUBG2;ENSG00000131462|ENST00000251413|TUBG1 56.04830969593885 0.114297258605095 4 [WP]G{I|L}[PA]S{I|L} 8 2 + 61.119 0.0 0.0 7.2808 7.2808 61.195 0.0 0.0 0.0 11.461280356782382 16.40978057358332 11.461280356782382 0.0 0 0.9247425010840048 1.5228787452803376 0.4247425010840047 0.0 [WP]G{I|L}[PA]S{I|L};[WP]{I|L}G[PA]S{I|L};[WP]G[PA]{I|L}S{I|L};[WP][QP]{I|L}S{I|L};[WP]{I|L}[QP]S{I|L};[{I|L}P]WG[PA]S{I|L};[{I|L}P]W[QP]S{I|L};[QP][WP]{I|L}S{I|L};{[TV]|[{I|L}S]}[QP][WP]{I|L};[PA]G[WP]{I|L}S{I|L} 7.2808;7.2808;7.2808;6.5173;6.5173;5.9155;5.152;3.6964;3.4636;3.059 -;-;-;-;-;+;-;-;-;- + 236 1 1.058 43120.8 1.0 11356 4961 16316 HBL1_DMSO_200M_050219_2,16319 HBL1_DMSO_200M_050219_2,16319,IPWGPASI True True IPWGPASI 86.089725 420.73448485136 45037008.0 16316.0 ENSG00000037042|ENST00000251412|TUBG2;;ENSG00000131462|ENST00000251413|TUBG1 1.5294789876788857 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16320 86.092 100.0 643880.0 25 0 60223.0 + 44334 YLPPGFLSA 9 86 482.76040439193247 963.506255850665 2 482.7608215212822 MULTI CID FTMS 0 0 0 16316 515572.625 0.972574847531932 -2 0.2395706176757812 4 Unmodified _YLPPGFLSA_ ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-4|SREBF1 53.57557251787612 0.0325303259649373 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{I|L}Y{I|L}{[SA]|[TG]} 9 4 + 38.936 0.0 0.0 4.041 4.041 72.582 0.0 0.0 0.0 9.167724800373456 6.271818570135331 6.271818570135331 4.771212547196626 0 0.2614393726401688 1.2218487496163564 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{I|L}Y{I|L}{[SA]|[TG]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{I|L}PY{I|L}{[SA]|[TG]};[PG]{M(Oxidation (M))|F}P{I|L}Y{I|L}{[SA]|[TG]};[Y{I|L}][VS]S{I|L}[WP];[PG]P{M(Oxidation (M))|F}{I|L}Y{I|L}{[SA]|[TG]};[PG]{M(Oxidation (M))|F}{I|L}PY{I|L}{[SA]|[TG]};{[SA]|[TG]}[KQ]PY{I|L}{[SA]|[TG]};[Y{I|L}][VS]SPW{I|L};[Y{I|L}]P[KC]{NN|[MP]|[D{I|L}]|[EV]}{I|L};[Y{I|L}]P[NP][{M(Oxidation (M))|F}T]{I|L} 4.041;3.5458;2.7729;2.7121;2.4605;2.2777;2.1817;1.9496;1.6152;1.6152 -;-;-;-;-;-;-;-;-;- 403 1 1.058 55510.9 1.0 11357 4961 16316 HBL1_DMSO_200M_050219_2,16320 HBL1_DMSO_200M_050219_2,16320,YLPPGFLSA True True YLPPGFLSA 86.091871 482.760821521282 27116277.0 16316.0 ENST00000395756.5_1_17:17715938-17721122:-|nuORF;;ENSG00000072310|ENST00000261646|SREBF1;;nc|ENSG00000072310|P36956-4|SREBF1 7.957256476084392 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16321 86.095 155.0 321920.0 25 0 30691.0 + 35113 SQWDSSTPTE 10 76 569.2386305562453 1136.4627081792903 2 569.2391845583916 MULTI CID FTMS 0 0 0 16316 323368.25 1.0 0 0.0 5 Unmodified _SQWDSSTPTE_ REV__ENSG00000105723|ENST00000222330|GSK3A;REV__ENST00000493059.1_1_19:42734948-42736858:-|nuORF 26.268140514670165 0.3785003716575977 4 {[QS]|[NT]}WD 4 -1 34.464 0.0 0.0 3.0326 0.0 0.0 0.0 617.2439331150905 617.2439331150905 19.515494032379728 0.0 0.0 0.0 0 0.9247425010840048 0.9208187539523752 0.2302046884880938 0.5774509799928715 {[QS]|[NT]}WD 3.0326 + + 53 1 1.058 44606.7 1.0 11358 4961 16316 HBL1_DMSO_200M_050219_2,16321 HBL1_DMSO_200M_050219_2,16321,SQWDSSTPTE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16322 86.1 250.0 515430.0 25 0 65922.0 + 10196 FQGDLVKEMQL 11 144 654.3375529971674 0 654.3371459841728 PEAK CID FTMS 0 0 0 16316 308369.1875 1.0 0 0.0 6 Unmodified _FQGDLVKEMQL_ ENSG00000117724|ENST00000366955|CENPF 105.34515851771124 3.6842261041232586e-14 4 GD{I|L}V 4 7 35.037 0.0 0.0 2.6814 0.0 0.0 275.12874074311327 644.3086833839603 919.4374241270737 0.0 0.0 0.0 0.0 0 1.610924374808178 0.0 0.0 0.0 + GD{I|L}V 2.6814 + + 1525 + 1 1.058 100066.0 1.0 11359 4961 16316 HBL1_DMSO_200M_050219_2,16322 HBL1_DMSO_200M_050219_2,16322,FQGDLVKEMQL True True FQGDLVKEMQL 86.099623 654.337145984173 2904659.25 16316.0 ENSG00000117724|ENST00000366955|CENPF 7.388433297475179 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16323 86.105 276.0 277640.0 25 0 37914.0 + 38335 TQLGPPYHILV 11 93 619.3513647395349 1236.6881765458695 2 619.3516723513603 MULTI CID FTMS 0 0 0 16316 287004.5 0.7736126089465581 1 -0.1199951171875 7 Unmodified _TQLGPPYHILV_ ENSG00000119616|ENST00000341162|FCF1 72.96794272382148 0.0238034416328542 4 [QT]{I|L}G[HA]G{I|L}[QT]{I|L}V 12 6 + 68.417 0.0 0.0 5.5322 5.5322 78.555 0.0 0.0 0.0 7.301502349410839 0.5854562117252016 0.5854562117252016 4.771212547196626 0 1.885151878060192 1.2218487496163564 1.110924374808178 0.2134679910804404 [QT]{I|L}G[HA]G{I|L}[QT]{I|L}V;[QT]{I|L}G[HA]G[QT]{I|L}{I|L}V;[QT]{I|L}G[HA]{I|L}G[QT]{I|L}V;[QT]{I|L}G[HQ]{I|L}[QT]{I|L}V;[AG]T{I|L}G[HA]G{I|L}[QT]{I|L}V;[QT]{I|L}G[HA]{I|L}R[WR];[QT]{I|L}G[HQ][QT]{I|L}{I|L}V;[AG]T{I|L}G[HA]{I|L}G[QT]{I|L}V;[AG]T{I|L}G[HA]G[QT]{I|L}{I|L}V;[QT]{I|L}[HQ]G{I|L}[QT]{I|L}V 5.5322;5.1464;5.1464;4.9976;4.9418;4.7196;4.6118;4.556;4.556;4.5541 -;-;-;-;-;-;-;-;-;- 1763 1 1.058 63964.3 1.0 11360 4961 16316 HBL1_DMSO_200M_050219_2,16323 HBL1_DMSO_200M_050219_2,16323,TQLGPPYHILV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16324 86.106 75.0 2339900.0 25 0 207990.0 + 12921 GYPEVALHF 9 144 516.7609705695876 1031.507388205975 2 516.7619506716728 MULTI CID FTMS 0 0 0 16316 257448.390625 0.2136285987168719 -5 0.5634536743164062 8 Unmodified _GYPEVALHF_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 22.736283301280096 0.2418982879461534 4 [PA]EV[KP]EAP 9 7 53.425 0.0 0.0 5.1793 0.0 0.0 0.0 110.00493692285956 110.00493692285956 13.457705970076988 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.6549471895720985 1.055462187404089 [PA]EV[KP]EAP 5.1793 - 2408 1 1.058 146134.5 1.0 11361 4961 16316 HBL1_DMSO_200M_050219_2,16324 HBL1_DMSO_200M_050219_2,16324,GYPEVALHF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16325 86.111 264.0 398860.0 25 0 62826.0 + 24435 MGVIVHII 8 113 441.2663741237933 880.5181953143866 2 441.2676269412041 MULTI CID FTMS 0 0 0 16316 243612.125 1.0 0 0.0 9 Unmodified _MGVIVHII_ ENSG00000277791|ENST00000619426|PSMB3 41.81723621529253 0.2038889569391319 4 MGV{I|L}VH{I|L}{I|L} 8 0 + 36.442 0.0 0.0 4.1387 4.1387 79.322 0.0 0.0 0.0 -4.320363211524303 6.286531417686099 -4.320363211524303 9.833333518428804 0 0.8182503180159344 1.5228787452803376 0.0 0.0 + + MGV{I|L}VH{I|L}{I|L};MR{I|L}VH{I|L}{I|L} 4.1387;3.0219 +;- + 207 + 1 1.058 89602.6 1.0 11362 4961 16316 HBL1_DMSO_200M_050219_2,16325 HBL1_DMSO_200M_050219_2,16325,MGVIVHII False True MGVIVHII 86.111339 441.267626941204 2146343.75 16316.0 ENSG00000277791|ENST00000619426|PSMB3 2.9193829695383706 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16326 86.125 800.0 171550.0 25 0 10352.0 -1 0 135 1029.831039667116 3086.471289601548 3 1030.500415027142 MULTI CID FTMS 0 0 0 16316 194725.140625 0.1005525237128989 -5 0.5634536743164062 10 4 [MN]P{[QN]|[E{I|L}]|[KN]}VSEMAASN 13 -1 36.456 0.0 0.0 1.1812 0.0 0.0 0.0 1709.7721678576606 1709.7721678576606 13.021565707370655 0.0 0.0 0.0 0 0.5 2.0 0.2614393726401688 0.6237125054200234 [MN]P{[QN]|[E{I|L}]|[KN]}VSEMAASN 1.1812 - 11797 1 1.058 92607.4 0.7900000214576721 11363 4961 16316 HBL1_DMSO_200M_050219_2,16326 HBL1_DMSO_200M_050219_2,16326, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16327 86.131 300.0 323720.0 25 0 49968.0 1620 ALLTFDTGC 9 96 314.15348691492704 939.4386313449812 3 314.1532165408134 MULTI CID FTMS 0 0 0 16316 200264.921875 0.1059130355481655 3 -0.2646713256835937 11 Unmodified _ALLTFDTGC_ ENSG00000009830|ENST00000261534|POMT2;ENST00000452340.7_1_14:77746025-77787024:-|nuORF 23.1484247019978 0.2366544122328345 4 A{I|L}{I|L} 3 6 48.698 0.0 0.0 5.1837 0.0 0.0 0.0 639.2106955564542 639.2106955564542 41.250612633917 0.0 0.0 0.0 0 0.25 2.0 0.0 0.0 + A{I|L}{I|L} 5.1837 + + 19 + 1 1.058 82284.5 1.0 11364 4961 16316 HBL1_DMSO_200M_050219_2,16327 HBL1_DMSO_200M_050219_2,16327,ALLTFDTGC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16328 86.145 800.0 165190.0 25 0 9496.9 + 32573 SASTNSIFQA 10 128 1025.4943456665935 1024.4870691999936 1 1026.492968738079 MULTI CID FTMS 0 0 0 16316 195059.0625 1.0 0 0.0 12 Unmodified _SASTNSIFQA_ REV__ENSG00000164309|ENST00000446378|CMYA5 18.373094154950223 0.5392593366289069 4 PT{M(Oxidation (M))|F}QP 5 -1 25.662 0.0 0.0 2.5048 0.0 0.0 0.0 451.1952608697876 451.1952608697876 -6.048983715295936 0.0 -6.048983715295936 0.0 0 0.0 0.0 0.0 0.0 PT{M(Oxidation (M))|F}QP 2.5048 - 2502 + 1 1.058 89024.7 0.7699999809265137 11365 4961 16316 HBL1_DMSO_200M_050219_2,16328 HBL1_DMSO_200M_050219_2,16328,SASTNSIFQA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16329 86.15 275.0 251220.0 25 0 43151.0 + 16761 KFQAMDISL 9 106 526.7757956134321 1051.5370382936642 2 526.7765991091728 MULTI CID FTMS 0 0 0 16316 161076.0625 1.0 0 0.0 13 Unmodified _KFQAMDISL_ ENSG00000093009|ENST00000263201|CDC45;nc|ENSG00000093009|O75419-2|CDC45;nc|ENSG00000093009|O75419-3|CDC45 43.85829265575387 0.0542763391141878 4 SCKAMD{I|L}S{I|L} 9 3 49.529 0.0 0.0 4.7102 0.0 0.0 85.08991439033359 0.0 85.08991439033359 0.0 27.56662809091076 0.0 0.0 0 0.8182503180159344 0.0 0.9258337024346172 0.3494850021680094 SCKAMD{I|L}S{I|L} 4.7102 - 181 1 1.058 57306.2 1.0 11366 4961 16316 HBL1_DMSO_200M_050219_2,16329 HBL1_DMSO_200M_050219_2,16329,KFQAMDISL True True KFQAMDISL 86.149635 526.776599109173 1476599.25 16316.0 ENSG00000093009|ENST00000263201|CDC45;;nc|ENSG00000093009|O75419-2|CDC45;;nc|ENSG00000093009|O75419-3|CDC45 3.67874530951182 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16330 86.165 800.0 210920.0 25 0 9980.3 -1 0 124 1066.5047927952744 2130.995032657349 2 1067.006884753704 MULTI CID FTMS 0 0 0 16316 134975.71875 0.3953905825187615 -6 0.6879043579101562 14 4 {[TV]|[{I|L}S]}AAD[TA]{I|L}Y 9 -1 46.869 0.0 0.0 2.1994 0.0 0.0 0.0 1222.5249148197115 1222.5249148197115 6.41409204769765 0.0 0.0 0.0 0 0.9247425010840048 1.2218487496163564 2.2856668758921828 0.0 {[TV]|[{I|L}S]}AAD[TA]{I|L}Y 2.1994 - 17641 1 1.058 105844.6 0.6800000071525574 11367 4961 16316 HBL1_DMSO_200M_050219_2,16330 HBL1_DMSO_200M_050219_2,16330, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16331 86.174 521.0 165570.0 25 0 21965.0 + 25298 NAFDGPITI 9 124 474.2455902608573 946.4766275885148 2 474.2464172244072 MULTI CID FTMS 0 0 0 16316 111237.0546875 0.8646672310734411 1 -0.1199951171875 15 Unmodified _NAFDGPITI_ ENSG00000026508|ENST00000428726|CD44;ENST00000525209.5_1_11:35208413-35222108:+|nuORF;ENST00000531118.5_1_11:35198231-35211698:+|nuORF;nc|ENSG00000026508|P16070-10|CD44;nc|ENSG00000026508|P16070-11|CD44;nc|ENSG00000026508|P16070-12|CD44;nc|ENSG00000026508|P16070-13|CD44;nc|ENSG00000026508|P16070-14|CD44;nc|ENSG00000026508|P16070-15|CD44;nc|ENSG00000026508|P16070-16|CD44;nc|ENSG00000026508|P16070-17|CD44;nc|ENSG00000026508|P16070-18|CD44;nc|ENSG00000026508|P16070-3|CD44;nc|ENSG00000026508|P16070-4|CD44;nc|ENSG00000026508|P16070-5|CD44;nc|ENSG00000026508|P16070-6|CD44;nc|ENSG00000026508|P16070-7|CD44;nc|ENSG00000026508|P16070-8|CD44;nc|ENSG00000026508|P16070-9|CD44 30.63653989081413 0.1413794767160703 4 {[QG]|[NA]}{M(Oxidation (M))|F}[DG]P 6 3 23.618 0.0 0.0 2.4954 0.0 0.0 0.0 342.2026157079085 342.2026157079085 1.6234028829723712 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.3494850021680094 + {[QG]|[NA]}{M(Oxidation (M))|F}[DG]P 2.4954 + + 265 1 1.058 68777.3 1.0 11368 4961 16316 HBL1_DMSO_200M_050219_2,16331 HBL1_DMSO_200M_050219_2,16331,NAFDGPITI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16332 86.188 800.0 127520.0 25 0 7410.9 + -1 YWCQYFVYFWL 11 118 837.8749353808267 1673.7353178284534 2 837.8728515505791 MULTI CID FTMS 0 0 0 16316 111623.21875 0.9949762230453624 1 -0.1199951171875 16 Carbamidomethyl (C) _YWC(Carbamidomethyl (C))QYFVYFWL_ REV__L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|122|1|anti-sense 0.3506318815782774 0.8734936314171269 4 EAQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 11 -1 57.599 0.0 0.0 3.4414 0.0 0.0 363.1182728498063 0.0 363.1182728498063 0.0 41.47995149117779 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.805462187404089 EAQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 3.4414 - 1401 1 1.058 74093.4 0.6800000071525574 11369 4961 16316 HBL1_DMSO_200M_050219_2,16332 HBL1_DMSO_200M_050219_2,16332,YWCQYFVYFWL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16333 86.203 800.0 175170.0 25 0 20757.0 + 9374 FIPPDGNFRL 10 133 588.3145750034151 1174.6145970736302 2 588.3162109255791 MULTI CID FTMS 0 0 0 16316 124859.609375 0.9638357236699868 -1 0.1067276000976562 17 Unmodified _FIPPDGNFRL_ ENSG00000070718|ENST00000396926|AP3M2;ENSG00000185009|ENST00000355264|AP3M1;ENST00000480373.1_1_10:75888732-75889691:-|nuORF;nc|ENSG00000070718|P53677-2|AP3M2 27.628801355627647 0.3479284626772844 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[QT]{[WS]|[C(Carbamidomethyl (C)){I|L}]}PS{I|L} 10 6 + 35.819 0.0 0.0 3.0495 3.0495 64.343 0.0 0.0 0.0 17.91335209679953 0.1901013859444944 0.1901013859444944 1.6902893770987788 0 0.4247425010840047 1.154901959985743 0.5554621874040891 0.4247425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[QT]{[WS]|[C(Carbamidomethyl (C)){I|L}]}PS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[DV]S{[QG]|[NA]}PS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[QT]{[WS]|[C(Carbamidomethyl (C)){I|L}]}PTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[DV]S{[QG]|[NA]}PTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[{I|L}T]C{[QG]|[NA]}PS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[{I|L}T][C(Carbamidomethyl (C))Q]PS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[{I|L}T]C{[QG]|[NA]}PTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[Y{I|L}]SPP{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[TP]C{[QG]|[NA]}PS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[{I|L}T][C(Carbamidomethyl (C))Q]PTV 3.0495;2.9056;2.8885;2.7446;2.6905;2.5369;2.5296;2.4391;2.4343;2.376 -;-;-;-;-;-;-;-;-;- 702 + 1 1.058 106937.6 0.6800000071525574 11370 4961 16316 HBL1_DMSO_200M_050219_2,16333 HBL1_DMSO_200M_050219_2,16333,FIPPDGNFRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16335 86.207 5.2 11446000.0 25 0 1506800.0 + 21056 LPAELINQI 9 78 505.79784277119705 1009.581132609194 2 505.7982665896416 MULTI CID FTMS 0 0 0 16334 10980389.0 0.9773956337776676 1 -0.0843963623046875 1 Unmodified _LPAELINQI_ ENSG00000160877|ENST00000292431|NACC1 42.09456458481378 0.0639583784996157 4 [PA]E{I|L}{I|L}{I|L}NQ{I|L} 9 2 + 50.274 0.0 0.0 4.9797 4.9797 71.94 0.0 0.0 0.0 2.272437815030621 9.889917747712644 2.272437815030621 2.272437815030621 0 0.2742275032520141 0.8538719643217619 0.6139829889124311 0.0 [PA]E{I|L}{I|L}{I|L}NQ{I|L};[{I|L}P]AE{I|L}{I|L}NQ{I|L};[PA]E{I|L}{I|L}{I|L}GGQ{I|L};[PA]{I|L}E{I|L}{I|L}NQ{I|L};[{I|L}P]AE{I|L}{I|L}GGQ{I|L};[PA]{I|L}E{I|L}{I|L}GGQ{I|L};[VP][DV]{I|L}{I|L}NQ{I|L};[VP][DV]{I|L}{I|L}GGQ{I|L} 4.9797;4.7546;4.0676;4.0345;3.8425;3.1224;2.9968;2.0847 -;+;-;-;-;-;-;- + 155 1 1.066 52738.8 1.0 11371 4962 16334 HBL1_DMSO_200M_050219_2,16335 HBL1_DMSO_200M_050219_2,16335,LPAELINQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16336 86.209 97.0 583240.0 25 0 101130.0 + 35053 SQTDFSQLL 9 97 519.7579786227658 1037.5014043123315 2 519.7590209841728 MULTI CID FTMS 0 0 0 16334 293380.5625 0.3997751116010596 2 -0.1446762084960937 2 Unmodified _SQTDFSQLL_ ENSG00000155506|ENST00000518297|LARP1;nc|ENSG00000155506|Q6PKG0-3|LARP1 32.78568957990786 0.1150597335874693 4 [AG]STD{M(Oxidation (M))|F}S 7 6 32.22 0.0 0.0 3.1055 0.0 0.0 0.0 369.21152329110026 369.21152329110026 8.03856138936392 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.9957416651753048 0.0 [AG]STD{M(Oxidation (M))|F}S 3.1055 - 168 1 1.066 49320.4 1.0 11372 4962 16334 HBL1_DMSO_200M_050219_2,16336 HBL1_DMSO_200M_050219_2,16336,SQTDFSQLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16337 86.211 42.0 1313000.0 25 0 153150.0 + -1 PDTLVWTML 9 90 546.2771938403027 1090.5398347474054 2 546.2777587771416 MULTI CID FTMS 0 0 0 16334 822972.375 1.0 0 0.0 3 Oxidation (M) _PDTLVWTM(Oxidation (M))L_ REV__ENSG00000175697|ENST00000464295|GPR156;REV__nc|ENSG00000175697|Q8NFN8-2|GPR156 11.640296217721598 0.521594087909532 4 {I|L}{I|L}[WY]{I|L}{I|L} 6 -1 30.647 0.0 0.0 2.8103 0.0 0.0 0.0 286.0405421050804 286.0405421050804 3.266062568876716 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}[WY]{I|L}{I|L} 2.8103 - 113 1 1.066 52267.2 1.0 11373 4962 16334 HBL1_DMSO_200M_050219_2,16337 HBL1_DMSO_200M_050219_2,16337,PDTLVWTML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16338 86.213 92.0 696660.0 25 0 88252.0 + 4420 DAVTAFESI 9 90 476.7351930362423 951.4558331392848 2 476.7349120974541 MULTI CID FTMS 0 0 0 16334 590981.25 0.6853711171128086 -1 0.1199951171875 4 Unmodified _DAVTAFESI_ ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1 57.47134341890925 0.0274820932774257 4 {[DA]|[EG]}VTA{M(Oxidation (M))|F} 6 3 41.577 0.0 0.0 4.3698 0.0 0.0 0.0 344.14581051649094 344.14581051649094 17.48711959732331 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.3494850021680094 0.0 + {[DA]|[EG]}VTA{M(Oxidation (M))|F} 4.3698 + + 394 1 1.066 55618.5 1.0 11374 4962 16334 HBL1_DMSO_200M_050219_2,16338 HBL1_DMSO_200M_050219_2,16338,DAVTAFESI True True DAVTAFESI 86.212697 476.734912097454 15437105.0 16334.0 ENSG00000153201|ENST00000283195|RANBP2;;nc|ENSG00000183054|Q99666-2|RGPD5;;ENSG00000169629|ENST00000302558|RGPD8;;ENSG00000015568|ENST00000016946|RGPD5;;ENSG00000187627|ENST00000641458|RGPD1;;ENSG00000185304|ENST00000398146|RGPD2;;ENSG00000183054|ENST00000329516|RGPD6;;nc|ENSG00000187627|P0DJD0|RGPD1 4.607973416646321 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16339 86.214 75.0 599540.0 25 0 50147.0 + 20091 LIYTGQHFV 9 88 539.2907837093079 1076.5670144854157 2 539.2906371951103 MULTI CID FTMS 0 0 0 16334 398004.46875 0.6731740306582507 -2 0.2267227172851562 5 Unmodified _LIYTGQHFV_ REV__ENST00000333172.10_1_1:6639007-6639235:+|nuORF 7.910154910731844 0.6385446671287552 4 [Q{I|L}][{M(Oxidation (M))|F}V]W 5 -1 20.458 0.0 0.0 1.9003 0.0 0.0 0.0 400.20017419986567 400.20017419986567 3.458313147117078 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [Q{I|L}][{M(Oxidation (M))|F}V]W 1.9003 - 94 + 1 1.066 39335.8 1.0 11375 4962 16334 HBL1_DMSO_200M_050219_2,16339 HBL1_DMSO_200M_050219_2,16339,LIYTGQHFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16340 86.218 162.0 562690.0 25 0 56262.0 + 36172 SVVKVLTEL 9 144 494.3089986486352 986.6034443640704 2 494.3078185915947 MULTI CID FTMS 0 0 0 16334 321935.8125 0.4471470462618623 -2 0.2267227172851562 6 Unmodified _SVVKVLTEL_ ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-2|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428|TCOF1 45.739877483867886 0.0497104363764649 4 [VS]V[{I|L}A]TVVS{I|L} 10 5 + 39.636 0.0 0.0 4.0175 4.0175 68.278 0.0 0.0 0.0 2.2761535273029665 4.8871238354941084 2.2761535273029665 2.2761535273029665 0 1.0682503180159344 2.0 0.3882104921644452 0.0 [VS]V[{I|L}A]TVVS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TA{I|L}TE{I|L};{[TV]|[{I|L}S]}[K{I|L}]A{I|L}TE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VTSVE{I|L};[VS]V[{I|L}A]TA[{I|L}T]{I|L};{[TV]|[{I|L}S]}[R{I|L}]TVW{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V[VS]TE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}TSVE{I|L};{[QN]|[E{I|L}]|[KN]}TVKVW{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VTEVS{I|L} 4.0175;3.7868;3.5882;3.3697;3.1336;2.9731;2.9529;2.8861;2.8452;2.7718 -;-;-;-;-;-;-;-;-;- 1787 1 1.066 72732.8 1.0 11376 4962 16334 HBL1_DMSO_200M_050219_2,16340 HBL1_DMSO_200M_050219_2,16340,SVVKVLTEL True True SVVKVLTEL 86.217622 494.307818591595 0.0 16334.0 nc|ENSG00000070814|Q13428-7|TCOF1;;nc|ENSG00000070814|Q13428-4|TCOF1;;ENSG00000070814|ENST00000643257|TCOF1;;nc|ENSG00000070814|Q13428-2|TCOF1;;nc|ENSG00000070814|Q13428|TCOF1;;nc|ENSG00000070814|Q13428-6|TCOF1;;nc|ENSG00000070814|Q13428-8|TCOF1 4.457818349202474 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16341 86.22 93.0 469790.0 25 0 58273.0 + 33819 SLDRSISPV 9 82 487.26979882348274 972.5250447137656 2 487.2711669802666 MULTI CID FTMS 0 0 0 16334 319359.03125 1.0 0 0.0 7 Unmodified _SLDRSISPV_ REV__ENSG00000186377|ENST00000371901|CYP4X1;REV__nc|ENSG00000186377|Q8N118-2|CYP4X1;REV__nc|ENSG00000186377|Q8N118-3|CYP4X1 18.1463463914782 0.3454829746528889 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QVD{I|L}[RV] 8 -1 + 45.328 0.0 0.0 4.6608 4.6608 78.153 0.0 0.0 0.0 7.95880017344075 6.989700043360188 6.989700043360188 7.914478256039672 0 0.0 1.3979400086720375 0.0 0.8494850021680094 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QVD{I|L}[RV];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DN]{I|L}{I|L}[RV];{I|L}{I|L}[MN]D{I|L}[RV];[DP]N{M(Oxidation (M))|F}{I|L}{I|L}[RV];{NN|[MP]|[D{I|L}]|[EV]}[MN]{I|L}{I|L}[RV];{[TV]|[{I|L}S]}[RD]D{I|L}[RV];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[AG]VD{I|L}[RV];[Q{I|L}]MVD{I|L}[RV];YY{M(Oxidation (M))|F}{I|L}{I|L}[RV];{[QN]|[E{I|L}]|[KN]}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{I|L}[RV] 4.6608;3.847;3.8425;3.5375;3.3564;3.1708;2.835;2.8142;2.672;2.3407 -;-;-;-;-;-;-;-;-;- 243 1 1.066 41351.3 1.0 11377 4962 16334 HBL1_DMSO_200M_050219_2,16341 HBL1_DMSO_200M_050219_2,16341,SLDRSISPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16342 86.223 182.0 448870.0 25 0 36307.0 + 30027 QTPEFFQDV 9 114 555.7588849302487 1109.5032169272972 2 555.7590820193291 MULTI CID FTMS 0 0 0 16334 295126.28125 0.1973724127899443 -5 0.5603561401367188 8 Unmodified _QTPEFFQDV_ ENSG00000169710|ENST00000306749|FASN 41.8396318013385 0.0653578398400075 4 [EP][QT]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 6 6 31.884 0.0 0.0 2.8737 0.0 0.0 0.0 357.13991061309724 357.13991061309724 -0.0691785664946493 0.0 -0.0691785664946493 0.0 0 0.0 1.3010299956639813 1.3494850021680094 0.5 [EP][QT]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.8737 - 719 1 1.066 70299.4 1.0 11378 4962 16334 HBL1_DMSO_200M_050219_2,16342 HBL1_DMSO_200M_050219_2,16342,QTPEFFQDV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16343 86.226 168.0 332800.0 25 0 40850.0 + 13921 HVYELLNTI 9 88 551.3008454868261 1100.587138040452 2 551.3009521365166 MULTI CID FTMS 0 0 0 16334 263750.34375 0.146691540004017 3 -0.1966171264648437 9 Unmodified _HVYELLNTI_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 39.957323273325 0.0756908302845263 4 [HV][YE]{I|L}{I|L}NT{I|L} 9 0 + 52.425 0.0 0.0 4.7634 4.7634 78.227 0.0 0.0 0.0 7.525749891599531 9.137342758552691 7.525749891599531 7.525749891599531 0 0.5796896906561032 1.6989700043360187 0.3494850021680094 0.0 + + [HV][YE]{I|L}{I|L}NT{I|L};[{I|L}T]N{[CP]|[EA]}{I|L}{I|L}NT{I|L};{[QS]|[NT]}{I|L}{[CP]|[EA]}{I|L}{I|L}NT{I|L};[HV][YE]{I|L}{I|L}GGT{I|L};{[QN]|[E{I|L}]|[KN]}Y[HV]{I|L}NT{I|L};[Q{I|L}]S{[CP]|[EA]}{I|L}{I|L}NT{I|L};{[VA]|[{I|L}G]}AS{[CP]|[EA]}{I|L}{I|L}NT{I|L};[{I|L}T]N{[CP]|[EA]}{I|L}{I|L}GGT{I|L};[{I|L}T]GG{[CP]|[EA]}{I|L}{I|L}NT{I|L};{[QS]|[NT]}{I|L}{[CP]|[EA]}{I|L}{I|L}GGT{I|L} 4.7634;4.0796;4.0419;3.9267;3.4509;3.447;3.2488;3.2469;3.2469;3.2093 +;-;-;-;-;-;-;-;-;- + 310 1 1.066 51639.7 1.0 11379 4962 16334 HBL1_DMSO_200M_050219_2,16343 HBL1_DMSO_200M_050219_2,16343,HVYELLNTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16344 86.229 153.0 412740.0 25 0 74703.0 + 109 AAIPIQINV 9 84 469.7874441884143 937.5603354436286 2 469.7873412966728 MULTI CID FTMS 0 0 0 16334 247307.0 0.8445782452338805 -1 0.1199951171875 10 Unmodified _AAIPIQINV_ ENSG00000204463|ENST00000676615|BAG6;ENST00000469182.1_1_6:31610750-31613330:-|nuORF;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-4|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 30.22481116460888 0.1466181017706357 4 [{I|L}P]AG{I|L}D 6 6 33.365 0.0 0.0 3.5587 0.0 0.0 0.0 368.226957317679 368.226957317679 11.16369046023241 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P]AG{I|L}D 3.5587 - 144 1 1.066 53242.7 1.0 11380 4962 16334 HBL1_DMSO_200M_050219_2,16344 HBL1_DMSO_200M_050219_2,16344,AAIPIQINV False True AAIPIQINV 86.229478 469.787341296673 2475623.25 16334.0 nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000204463|P46379-5|BAG6;;ENST00000469182.1_1_6:31610750-31613330:-|nuORF;;nc|ENSG00000204463|P46379-4|BAG6;;nc|ENSG00000204463|P46379-2|BAG6;;ENSG00000204463|ENST00000676615|BAG6 2.4420153299967446 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16345 86.234 245.0 351170.0 25 0 44200.0 + 33286 SFQESVMDL 9 121 528.2398423412967 1054.465131749393 2 528.2399169802666 MULTI CID FTMS 0 0 0 16334 224462.515625 0.8416125641494022 -1 0.1199951171875 11 Unmodified _SFQESVMDL_ ENST00000420015.6_1_16:14722075-14723468:-|nuORF 34.40172386719151 0.1061884637610825 4 MD{I|L} 3 6 24.966 0.0 0.0 2.3676 0.0 0.0 677.3030966925559 0.0 677.3030966925559 0.0 2.715973736463188 0.0 0.0 0 0.3494850021680094 0.0 0.3054621874040891 0.0 + MD{I|L} 2.3676 + + 590 + 1 1.066 74531.4 1.0 11381 4962 16334 HBL1_DMSO_200M_050219_2,16345 HBL1_DMSO_200M_050219_2,16345,SFQESVMDL True True SFQESVMDL 86.234061 528.239916980267 1914583.0 16334.0 ENST00000420015.6_1_16:14722075-14723468:-|nuORF 1.2566906412442524 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16346 86.248 800.0 148570.0 25 0 15722.0 + + -1 VVYDDSTGLIRL 12 143 675.8175859838417 1349.6206190344833 2 675.8180419802666 MULTI CID FTMS 0 0 0 16334 179430.53125 0.3139079182985464 2 -0.1446762084960937 12 Carbamidomethyl (C) _IIQDEC(Carbamidomethyl (C))PLESF_ nc|ENSG00000163873|Q13003-2|GRIK3;nc|ENSG00000164418|Q13002-6|GRIK2;nc|ENSG00000164418|Q13002-7|GRIK2;nc|ENSG00000164418|Q13002-2|GRIK2;ENSG00000163873|ENST00000373091|GRIK3;nc|ENSG00000164418|Q13002-3|GRIK2;nc|ENSG00000164418|Q13002-5|GRIK2;nc|ENSG00000164418|Q13002-4|GRIK2;ENSG00000164418|ENST00000369134|GRIK2 32.78568957990786 0.3235288296534633 4 {I|L}{I|L}DEQ{I|L} 6 -1 53.554 0.0 0.0 3.9681 0.0 0.0 0.0 635.2192878179395 635.2192878179395 33.27688785613161 0.0 0.0 0.0 0 1.055462187404089 2.0 0.5629529932484498 0.25 {I|L}{I|L}DEQ{I|L} 3.9681 - 950 1 1.066 92161.7 0.8199999928474426 11382 4962 16334 HBL1_DMSO_200M_050219_2,16346 HBL1_DMSO_200M_050219_2,16346,IIQDECPLESF False False VVYDDSTGLIRL 86.247901 675.818041980267 126777.3359375 16334.0 nc|ENSG00000163873|Q13003-2|GRIK3;;nc|ENSG00000164418|Q13002-6|GRIK2;;nc|ENSG00000164418|Q13002-7|GRIK2;;nc|ENSG00000164418|Q13002-2|GRIK2;;ENSG00000163873|ENST00000373091|GRIK3;;nc|ENSG00000164418|Q13002-3|GRIK2;;nc|ENSG00000164418|Q13002-5|GRIK2;;nc|ENSG00000164418|Q13002-4|GRIK2;;ENSG00000164418|ENST00000369134|GRIK2 1.5278471906979878 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16347 86.253 294.0 419060.0 25 0 47312.0 + 29312 QILDGIHYL 9 152 536.2956751336259 1070.5767973340517 2 536.2958251833916 MULTI CID FTMS 0 0 0 16334 172310.125 0.8938174343811599 -1 0.1199951171875 13 Unmodified _QILDGIHYL_ ENSG00000132964|ENST00000381527|CDK8;ENSG00000155111|ENST00000368911|CDK19;nc|ENSG00000132964|P49336-2|CDK8;nc|ENSG00000155111|Q9BWU1-2|CDK19 46.92087301778293 0.0471210510596396 4 [Q{I|L}]AA[KQ]HY{I|L} 9 4 + 48.078 0.0 0.0 4.4909 4.4909 69.401 0.0 0.0 0.0 29.21663477057574 8.368486277457428 8.368486277457428 1.8924048782842604 0 0.2887254899964357 1.6989700043360187 0.0 0.6139829889124311 [Q{I|L}]AA[KQ]HY{I|L};[Q{I|L}]{I|L}D{[VA]|[{I|L}G]}HY{I|L};[Q{I|L}]AH{I|L}[DV]Y{I|L};[Q{I|L}]{I|L}{[RE]|[WV]}HY{I|L};[Q{I|L}]AA[KQ][WQ]V;[Q{I|L}]{I|L}D{[VA]|[{I|L}G]}[WQ]V;[Q{I|L}]AH{I|L}[YE]VV;[Q{I|L}]{I|L}[HA][DV]Y{I|L};[Q{I|L}]{I|L}{[RE]|[WV]}[WQ]V;[Q{I|L}]AH{[HG]|PP}[NP]VV 4.4909;4.3141;4.0341;3.9902;3.1605;2.9837;2.768;2.6794;2.6598;1.868 -;+;-;-;-;-;-;-;-;- + 1267 + 1 1.066 99896.8 1.0 11383 4962 16334 HBL1_DMSO_200M_050219_2,16347 HBL1_DMSO_200M_050219_2,16347,QILDGIHYL True True QILDGIHYL 86.253303 536.295825183392 2214373.25 16334.0 ENSG00000132964|ENST00000381527|CDK8;;nc|ENSG00000155111|Q9BWU1-2|CDK19;;nc|ENSG00000132964|P49336-2|CDK8;;ENSG00000155111|ENST00000368911|CDK19 4.364901860555013 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16348 86.257 172.0 310930.0 25 0 29487.0 + 35691 SVFNIKLVQA 10 91 559.8328206736236 1117.651088414047 2 559.8326293826103 MULTI CID FTMS 0 0 0 16334 159490.796875 1.0 0 0.0 14 Unmodified _SVFNIKLVQA_ ENSG00000137807|ENST00000679126|KIF23;nc|ENSG00000137807|Q02241-2|KIF23;nc|ENSG00000137807|Q02241-3|KIF23;nc|ENSG00000137807|Q02241|KIF23 19.361941925380144 0.5226674314761524 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[K{I|L}]VSV[QA] 10 4 + 32.408 0.0 0.0 2.8997 2.8997 71.183 0.0 0.0 0.0 0.7918124604762475 19.93378736925017 0.7918124604762475 6.264100213633764 0 0.2742275032520141 0.0 0.0 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[K{I|L}]VSV[QA];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[K{I|L}]VQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QV]|[N{I|L}]|[RA]|[KV]}[K{I|L}]{M(Oxidation (M))|F}VSV[QA];{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[K{I|L}]VSV[QA];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[K{I|L}]V[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QV[K{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[K{I|L}]VQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QV]|[N{I|L}]|[RA]|[KV]}[K{I|L}]{M(Oxidation (M))|F}VQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QV[K{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QV[K{I|L}]{[RE]|[WV]}A 2.8997;2.3392;2.0459;2.0459;1.5153;1.4854;1.4854;1.4854;1.3736;1.1381 -;-;-;-;-;-;-;-;-;- 157 1 1.066 43949.7 1.0 11384 4962 16334 HBL1_DMSO_200M_050219_2,16348 HBL1_DMSO_200M_050219_2,16348,SVFNIKLVQA False True SVFNIKLVQA 86.25667 559.83262938261 1204281.625 16334.0 nc|ENSG00000137807|Q02241|KIF23;;nc|ENSG00000137807|Q02241-3|KIF23;;nc|ENSG00000137807|Q02241-2|KIF23;;ENSG00000137807|ENST00000679126|KIF23 1.494423508644104 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16349 86.264 411.0 471230.0 25 0 40935.0 + 29469 QLIKELPEL 9 173 541.8264354885597 1081.6383180439193 2 541.8270751833916 MULTI CID FTMS 0 0 0 16334 134651.953125 0.4171946718212363 -3 0.3595657348632812 15 Unmodified _QLIKELPEL_ ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 78.7280429016045 0.0178249292250809 4 [KP]{I|L}{I|L}V{[CA]|SS}EP{I|L} 10 7 + 37.031 0.0 0.0 3.4236 3.4236 63.547 0.0 0.0 0.0 0.6990796274068742 16.224150775803594 0.6990796274068742 0.6990796274068742 0 0.769969168427319 0.0 0.8494850021680094 0.8494850021680094 [KP]{I|L}{I|L}V{[CA]|SS}EP{I|L};[EP]{I|L}[RV]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}Q{I|L}EP{I|L};[{I|L}P]K{I|L}V{[CA]|SS}EP{I|L};[KP]{I|L}{I|L}QQ{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}GA{I|L}EP{I|L};[KP]{I|L}V{[WT]|[RM]}EP{I|L};[KP]{I|L}{I|L}VE[RD]{I|L};{[QN]|[E{I|L}]|[KN]}P[RV]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[KP]{I|L}V{I|L}{[CA]|SS}EP{I|L} 3.4236;3.359;3.1339;3.1276;2.8649;2.775;2.7042;2.6597;2.6436;2.5887 -;-;-;-;-;-;-;-;-;- 1511 1 1.066 152204.0 1.0 11385 4962 16334 HBL1_DMSO_200M_050219_2,16349 HBL1_DMSO_200M_050219_2,16349,QLIKELPEL True True QLIKELPEL 86.264013 541.827075183392 3922074.25 16334.0 ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 4.0060047308603925 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16350 86.273 450.0 195250.0 25 0 21437.0 + 39056 TVVIGGVVAV 10 123 457.28956277582046 912.5645726184408 2 457.2899352908134 MULTI CID FTMS 0 0 0 16334 115789.1015625 0.039482563188916 9 -0.8451309204101562 16 Unmodified _TVVIGGVVAV_ nc|ENSG00000165949|P40305-1|IFI27 48.345845343767074 0.089859443182303 4 {[TV]|[{I|L}S]}VN{I|L}V 6 6 42.367 0.0 0.0 4.6426 0.0 0.0 0.0 284.16086103080346 284.16086103080346 16.8735037227183 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.4698565171985374 0.0 {[TV]|[{I|L}S]}VN{I|L}V 4.6426 - 1197 1 1.066 74047.4 1.0 11386 4962 16334 HBL1_DMSO_200M_050219_2,16350 HBL1_DMSO_200M_050219_2,16350,TVVIGGVVAV True True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 16351 86.287 800.0 231330.0 25 0 7410.0 + -1 LIYLFCMLLS 10 183 636.8385839438947 1271.6626149545891 2 636.8395873904228 MULTI CID FTMS 0 0 0 16334 105857.9609375 1.0 0 0.0 17 Carbamidomethyl (C) _LIYLFC(Carbamidomethyl (C))MLLS_ REV__ENSG00000088387|ENST00000682017|DOCK9;REV__ENST00000472874.1_1_13:99498284-99512707:-|nuORF;REV__nc|ENSG00000088387|Q9BZ29-3|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-4|DOCK9;REV__nc|ENSG00000088387|Q9BZ29-5|DOCK9;REV__nc|ENSG00000088387|Q9BZ29|DOCK9 20.453626601364224 0.5043500229302764 4 [{M(Oxidation (M))|F}V][HC]K[{I|L}P]RC(Carbamidomethyl (C)){I|L} 10 -1 + 30.635 0.0 0.0 2.409 2.409 65.219 0.0 0.0 0.0 9.876662649262748 2.730012720637376 2.730012720637376 2.730012720637376 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V][HC]K[{I|L}P]RC(Carbamidomethyl (C)){I|L};[{M(Oxidation (M))|F}V][HC]K[{I|L}P]S[WR];[{M(Oxidation (M))|F}V][HC]K[{I|L}P]RGC{I|L};[PA]E{I|L}{I|L}{I|L}{[MG]|[TS]}[NS]{I|L}D;[PA]E{I|L}{I|L}[DC][RK]{I|L}D;[EP]A{I|L}{I|L}{I|L}{[MG]|[TS]}[NS]{I|L}D;[EP]A{I|L}{I|L}[DC][RK]{I|L}D;[PA]E{I|L}{I|L}[MD]KK{I|L}D;[EP]A{I|L}{I|L}[MD]KK{I|L}D;[PA]E{I|L}{I|L}{I|L}{[MG]|[TS]}[WK]D 2.409;2.1944;1.7119;1.6324;1.5998;1.5357;1.5032;1.4254;1.3287;1.1124 -;-;-;-;-;-;-;-;-;- 2850 + 1 1.066 137532.9 0.5899999737739563 11387 4962 16334 HBL1_DMSO_200M_050219_2,16351 HBL1_DMSO_200M_050219_2,16351,LIYLFCMLLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16353 86.292 33.0 1690300.0 25 0 263630.0 + 33242 SFPAPSLAL 9 80 451.75274496202985 901.4909369908596 2 451.7528869509697 MULTI CID FTMS 0 0 0 16352 1788209.625 0.1376877941836498 48 -5.1575469970703125 1 Unmodified _SFPAPSLAL_ REV__ENST00000380191.8_1_10:5855216-5855492:-|nuORF 46.020951573049366 0.0490941689151868 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 63.835 0.0 0.0 7.081 7.081 81.68 0.0 0.0 0.0 17.21340305007878 8.384767769392738 8.384767769392738 3.0102999566398125 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPAS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PAPS{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[PS]{M(Oxidation (M))|F}APS{I|L}A{I|L} 7.081;6.7471;5.1716;5.0041;4.8377;4.3078;4.281;4.2765;4.0871;3.9739 -;-;-;-;+;-;-;-;-;- + 213 1 1.074 52393.3 1.0 11388 4963 16352 HBL1_DMSO_200M_050219_2,16353 HBL1_DMSO_200M_050219_2,16353,SFPAPSLAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16354 86.293 24.0 2385500.0 25 0 255020.0 23438 LTFAYKHALV 10 78 581.8347646920276 1161.6549764508552 2 581.8348266482353 MULTI CID FTMS 0 0 0 16352 1974750.0 1.0 0 0.0 2 Unmodified _LTFAYKHALV_ ENSG00000134900|ENST00000376052|TPP2;ENST00000466153.5_1_13:103307300-103330663:+|nuORF;nc|ENSG00000134900|P29144|TPP2 14.40537977576856 0.6058337302021266 4 M{I|L}YAV 5 7 39.949 0.0 0.0 3.4389 0.0 0.0 566.3545843233693 0.0 566.3545843233693 0.0 18.77758779335053 0.0 0.0 0 0.5 0.0 0.0 0.0 M{I|L}YAV 3.4389 - 83 1 1.074 48784.4 1.0 11389 4963 16352 HBL1_DMSO_200M_050219_2,16354 HBL1_DMSO_200M_050219_2,16354,LTFAYKHALV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16355 86.294 50.0 1040400.0 25 0 189870.0 + 17772 KQFEPNDFYL 10 67 650.8141629345582 1299.6137729359164 2 650.8140746951103 MULTI CID FTMS 0 0 0 16352 966119.8125 0.7663809984087271 1 -0.0602798461914062 3 Unmodified _KQFEPNDFYL_ ENSG00000101126|ENST00000621696|ADNP 43.9818466556824 0.1155196613165264 4 [KQ]{M(Oxidation (M))|F}E[NP]D{M(Oxidation (M))|F}Y{I|L} 10 0 + 57.963 0.0 0.0 4.46 4.46 67.267 0.0 0.0 0.0 0.8307467239769153 16.53212513775344 0.8307467239769153 0.8307467239769153 0 1.0 0.0 0.4247425010840047 0.7059771852360797 + + [KQ]{M(Oxidation (M))|F}E[NP]D{M(Oxidation (M))|F}Y{I|L};[NP]D{M(Oxidation (M))|F}KAAD{M(Oxidation (M))|F}Y{I|L};[KQ]{M(Oxidation (M))|F}EYY{M(Oxidation (M))|F}Y{I|L};[NP]D{M(Oxidation (M))|F}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}Y{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KE[NP]D{M(Oxidation (M))|F}Y{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KEYY{M(Oxidation (M))|F}Y{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK[NP]D{M(Oxidation (M))|F}Y{I|L};[KQ]{M(Oxidation (M))|F}E{M(Oxidation (M))|F}YYY{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EKYY{M(Oxidation (M))|F}Y{I|L};YY{M(Oxidation (M))|F}KAAD{M(Oxidation (M))|F}Y{I|L} 4.46;4.3961;4.3245;4.2572;4.0973;3.9618;3.8656;3.766;3.7302;3.6679 +;-;-;-;-;-;-;-;-;- + 350 1 1.074 45936.0 1.0 11390 4963 16352 HBL1_DMSO_200M_050219_2,16355 HBL1_DMSO_200M_050219_2,16355,KQFEPNDFYL True True KQFEPNDFYL 86.294409 650.81407469511 23542920.0 16352.0 ENSG00000101126|ENST00000621696|ADNP 7.441071033477783 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16356 86.296 54.0 904620.0 25 0 95849.0 + 22286 LPRTIFPTSTI 11 77 623.3642607329433 1244.7139685326863 2 623.3642455935478 MULTI CID FTMS 0 0 0 16352 864993.5 0.5128868609776364 2 -0.1122207641601562 4 Unmodified _LPRTIFPTSTI_ ENSG00000139218|ENST00000369367|SCAF11;ENST00000546534.1_1_12:46325244-46326951:-|nuORF 64.9267550582149 0.0491502274424461 4 [{I|L}T][RP]{I|L}{M(Oxidation (M))|F}[TP]ST{I|L} 11 2 + 65.48 0.0 0.0 5.2607 5.2607 73.97 0.0 0.0 0.0 2.786144654057658 16.575773191777927 2.786144654057658 2.786144654057658 0 1.424742501084005 1.5228787452803376 1.25 0.3494850021680094 [{I|L}T][RP]{I|L}{M(Oxidation (M))|F}[TP]ST{I|L};[TP][R{I|L}]{I|L}{M(Oxidation (M))|F}[TP]ST{I|L};[{I|L}T][RP]{M(Oxidation (M))|F}{I|L}[TP]ST{I|L};[TP][R{I|L}]{M(Oxidation (M))|F}{I|L}[TP]ST{I|L};[{I|L}T][RP]{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}DT{I|L};[TP][R{I|L}]{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}DT{I|L};[{I|L}T][RP]{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}DT{I|L};[TP][R{I|L}]{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}DT{I|L};[{I|L}T][RP]{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}SE{I|L};[TP][R{I|L}]{I|L}{M(Oxidation (M))|F}{[VA]|[{I|L}G]}SE{I|L} 5.2607;5.0368;5.0188;4.795;4.1355;3.9116;3.8936;3.6698;3.0902;2.8664 -;-;-;-;-;-;-;-;-;- 377 1 1.074 43859.4 1.0 11391 4963 16352 HBL1_DMSO_200M_050219_2,16356 HBL1_DMSO_200M_050219_2,16356,LPRTIFPTSTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16357 86.298 116.0 515830.0 25 0 61284.0 + 15579 IPYLVVKV 8 81 465.8049888350621 929.5954247369242 2 465.8050414919853 MULTI CID FTMS 0 0 0 16352 542237.8125 0.4507928489636467 2 -0.1122207641601562 5 Unmodified _IPYLVVKV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 53.57557251787612 0.1224291679108181 4 {I|L}PY{I|L}VVKV 8 0 + 64.287 0.0 0.0 6.9156 6.9156 93.371 0.0 0.0 0.0 35.068503164616075 11.893426046896494 11.893426046896494 26.0450293571364 0 1.16944517631652 1.3979400086720375 0.0 0.0 + + {I|L}PY{I|L}VVKV;{I|L}PY{I|L}[{I|L}A][K{I|L}] 6.9156;4.1138 +;- + 222 + 1 1.074 52018.5 1.0 11392 4963 16352 HBL1_DMSO_200M_050219_2,16357 HBL1_DMSO_200M_050219_2,16357,IPYLVVKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16358 86.3 85.0 477160.0 25 0 60261.0 + 42564 VTPPGFQLV 9 70 479.2739339707902 956.5333150083804 2 479.2742797732353 MULTI CID FTMS 0 0 0 16352 519446.0 0.2073121135941041 -5 0.5547866821289062 6 Unmodified _VTPPGFQLV_ ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6 28.486842064014134 0.1687311288560894 4 {[TV]|[{I|L}S]}M 3 7 31.695 0.0 0.0 3.3135 0.0 0.0 0.0 622.3667086236936 622.3667086236936 16.478174818886373 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}M 3.3135 - 62 + 1 1.074 38833.1 1.0 11393 4963 16352 HBL1_DMSO_200M_050219_2,16358 HBL1_DMSO_200M_050219_2,16358,VTPPGFQLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16359 86.304 187.0 479520.0 25 0 81285.0 + 21543 LPIVTPAL 8 85 412.2681859210613 822.5218189089226 2 412.2680236697197 MULTI CID FTMS 0 0 0 16352 454932.875 0.7163227695234875 1 -0.0602798461914062 7 Unmodified _LPIVTPAL_ ENSG00000182481|ENST00000330459|KPNA2 48.847882008758354 0.1446664477986014 4 [{I|L}P]VT{I|L} 5 3 51.312 0.0 0.0 6.2384 0.0 0.0 0.0 296.1608113192456 296.1608113192456 34.40105620855803 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.805462187404089 0.0 [{I|L}P]VT{I|L} 6.2384 - 230 1 1.074 74548.5 1.0 11394 4963 16352 HBL1_DMSO_200M_050219_2,16359 HBL1_DMSO_200M_050219_2,16359,LPIVTPAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16360 86.307 158.0 507040.0 25 0 41357.0 + 10732 FYFDRDDVAL 10 84 630.798437975599 1259.582323017998 2 630.7987548708916 MULTI CID FTMS 0 0 0 16352 421181.125 0.5491063665850151 2 -0.1122207641601562 8 Unmodified _FYFDRDDVAL_ ENSG00000087086|ENST00000331825|FTL 34.221707139014875 0.2185845369562963 4 {M(Oxidation (M))|F}V{M(Oxidation (M))|F}YA{I|L} 6 6 46.943 0.0 0.0 3.7269 0.0 0.0 501.18150527168126 0.0 501.18150527168126 0.0 1.091896990114236 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {M(Oxidation (M))|F}V{M(Oxidation (M))|F}YA{I|L} 3.7269 - 215 1 1.074 63788.0 1.0 11395 4963 16352 HBL1_DMSO_200M_050219_2,16360 HBL1_DMSO_200M_050219_2,16360,FYFDRDDVAL False True FYFDRDDVAL 86.306875 630.798754870892 13068556.0 16352.0 ENSG00000087086|ENST00000331825|FTL 7.174282073974609 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16361 86.31 157.0 503260.0 25 0 60395.0 + 15430 IPPPVIMV 8 82 433.26449796231606 864.5144429914321 2 433.2646057009697 MULTI CID FTMS 0 0 0 16352 347688.875 0.6298224446637561 -4 0.4439620971679687 9 Unmodified _IPPPVIMV_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 24.20995872069341 0.5349487244130675 4 [{I|L}P]VPP{I|L}MV 8 2 + 42.261 0.0 0.0 4.8884 4.8884 75.797 0.0 0.0 0.0 10.969100130080562 7.257724967479859 7.257724967479859 4.771212547196626 0 0.6677353201839438 1.3979400086720375 0.0 0.0 [{I|L}P]VPP{I|L}MV;[{I|L}P]VP{I|L}PMV;[{I|L}P]VPPM{I|L}V;[VP]PP{I|L}{I|L}MV;{[HG]|PP}VP{I|L}{I|L}MV;[{M(Oxidation (M))|F}T]{I|L}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]P{I|L}P{I|L}MV;{[HG]|PP}V{I|L}P{I|L}MV;[{M(Oxidation (M))|F}T]{I|L}P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]{I|L}PP{I|L}MV 4.8884;4.3365;4.0489;3.6196;3.5421;3.4972;3.2714;3.1939;3.1489;3.0677 -;-;-;-;-;-;-;-;-;- 164 1 1.074 69820.8 1.0 11396 4963 16352 HBL1_DMSO_200M_050219_2,16361 HBL1_DMSO_200M_050219_2,16361,IPPPVIMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16362 86.314 225.0 433880.0 25 0 61184.0 1905 ALYSDRSI 8 98 462.744003502894 0 462.7443420290947 PEAK CID FTMS 0 0 0 16352 281483.03125 0.1075065507995732 22 -2.4477691650390625 10 Unmodified _ALYSDRSI_ ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5 19.438996006549623 0.4285751805470146 4 P{I|L} 2 7 15.217 0.0 0.0 1.6477 0.0 0.0 184.1207622192601 526.1931856744749 710.3139478937351 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L} 1.6477 - 21 + 1 1.074 80422.2 1.0 11397 4963 16352 HBL1_DMSO_200M_050219_2,16362 HBL1_DMSO_200M_050219_2,16362,ALYSDRSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16363 86.316 95.0 526580.0 25 0 52530.0 + 4432 DAWAQLNSI 9 90 509.2534476215631 1016.492342309926 2 509.2535888552666 MULTI CID FTMS 0 0 0 16352 245948.03125 0.7593902251461836 -2 0.2043914794921875 11 Unmodified _DAWAQLNSI_ ENSG00000159140|ENST00000356577|SON;nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-4|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-9|SON 39.957323273325 0.0756908302845263 4 NS{I|L} 3 6 28.188 0.0 0.0 2.773 0.0 0.0 684.3226473409793 0.0 684.3226473409793 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.4247425010840047 + NS{I|L} 2.773 + + 100 + 1 1.074 42462.0 1.0 11398 4963 16352 HBL1_DMSO_200M_050219_2,16363 HBL1_DMSO_200M_050219_2,16363,DAWAQLNSI True True DAWAQLNSI 86.316263 509.253588855267 2767818.0 16352.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;nc|ENSG00000159140|P18583-9|SON 3.6894667943318686 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16364 86.322 301.0 289060.0 25 0 26996.0 + 24751 MPFKCMQL 8 134 499.23709946702127 996.4596460008426 2 499.2375671267509 MULTI CID FTMS 0 0 0 16352 234858.046875 0.7844338449395512 2 -0.1122207641601562 12 Unmodified _MPFKCMQL_ ENSG00000188846|ENST00000396203|RPL14;ENST00000465280.1_1_3:40499395-40500228:+|nuORF;ENST00000481798.1_1_3:40499446-40503006:+|nuORF 38.15118350030904 0.2652218139009398 4 MP{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]{I|L}KV 8 4 + 49.66 0.0 0.0 4.9837 4.9837 77.873 0.0 0.0 0.0 25.324297369382 6.264193371874072 6.264193371874072 6.264193371874072 0 0.4436726795685343 1.3010299956639813 0.0 0.4247425010840047 MP{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]{I|L}KV;MP{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]KV{I|L};MP{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]CV{I|L};MP{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}[PA];MP{M(Oxidation (M))|F}[C(Carbamidomethyl (C))C]K{I|L}V;M{I|L}M[C(Carbamidomethyl (C))C]{I|L}KV;MP{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]C{I|L}V;M{I|L}[YN]CP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};M{I|L}M[C(Carbamidomethyl (C))C]KV{I|L};M{I|L}M[C(Carbamidomethyl (C))K]CV{I|L} 4.9837;4.355;4.0016;3.9918;3.9386;3.8078;3.5851;3.2617;3.1792;2.8257 -;-;-;-;-;-;-;-;-;- 892 + 1 1.074 69366.9 1.0 11399 4963 16352 HBL1_DMSO_200M_050219_2,16364 HBL1_DMSO_200M_050219_2,16364,MPFKCMQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16365 86.331 502.0 410660.0 25 0 36004.0 + 16495 KALGLVIRL 9 144 491.8424075954886 981.6702622577772 2 491.8423950076103 MULTI CID FTMS 0 0 0 16352 217512.1875 0.8651456451990401 -2 0.2043914794921875 13 Unmodified _KALGLVIRL_ ENSG00000089154|ENST00000300648|GCN1 81.89019881105858 0.0170587746866453 4 KA{I|L}{I|L}GV{I|L}R{I|L} 9 2 + 88.266 0.0 0.0 8.9914 8.9914 64.322 0.0 0.0 0.0 58.26101898315415 17.38273988191466 17.38273988191466 0.0 0 2.004432191740108 0.638272163982407 0.0 0.8296896906561031 KA{I|L}{I|L}GV{I|L}R{I|L};KA{I|L}G{I|L}V{I|L}R{I|L};KA{I|L}G{I|L}{I|L}VR{I|L};KA{I|L}{I|L}G{I|L}VR{I|L};K{I|L}A{I|L}GV{I|L}R{I|L};K{I|L}AG{I|L}V{I|L}R{I|L};KA{I|L}{I|L}G{I|L}[R{I|L}]V;KA{I|L}G{I|L}{I|L}[R{I|L}]V;K{I|L}Q{I|L}V{I|L}R{I|L};{I|L}KAG{I|L}V{I|L}R{I|L} 8.9914;8.9914;7.8759;7.8759;7.5252;7.5252;6.8449;6.8449;6.4775;6.4748 -;+;-;-;-;-;-;-;-;- + 738 + 1 1.074 160646.8 1.0 11400 4963 16352 HBL1_DMSO_200M_050219_2,16365 HBL1_DMSO_200M_050219_2,16365,KALGLVIRL True True KALGLVIRL 86.330615 491.84239500761 4778682.5 16352.0 ENSG00000089154|ENST00000300648|GCN1 4.273839155832927 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16366 86.335 206.0 192950.0 25 0 14158.0 + 30157 QVPGEGDFAVL 11 75 566.2876202303992 0 566.2876464724541 PEAK CID FTMS 0 0 0 16352 210603.890625 0.958350246568844 -1 0.0843963623046875 14 Unmodified _QVPGEGDFAVL_ ENSG00000116213|ENST00000270708|WRAP73 31.26834338654808 0.2152680502973705 4 AGVA{M(Oxidation (M))|F}DG 7 9 63.888 0.0 0.0 5.651 0.0 0.0 230.1642617251686 280.0936678522094 510.2579295773781 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.916386562212267 0.0 AGVA{M(Oxidation (M))|F}DG 5.651 - 203 + 1 1.074 37805.0 1.0 11401 4963 16352 HBL1_DMSO_200M_050219_2,16366 HBL1_DMSO_200M_050219_2,16366,QVPGEGDFAVL False True QVPGEGDFAVL 86.33455 566.287646472454 2757057.0 16352.0 ENSG00000116213|ENST00000270708|WRAP73 2.30627711613973 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16367 86.338 154.0 549500.0 25 0 62754.0 + 23794 LVDPLNMHV 9 96 519.2763907665901 1036.53822859998 2 519.2780029177666 MULTI CID FTMS 0 0 0 16352 192804.796875 0.9150214408322312 -1 0.0843963623046875 15 Unmodified _LVDPLNMHV_ ENSG00000138138|ENST00000680024|ATAD1;nc|ENSG00000138138|Q8NBU5-2|ATAD1 57.47134341890925 0.0274820932774257 4 [{I|L}V]DP{I|L}NMHV 9 0 + 66.754 0.0 0.0 6.4401 6.4401 89.41 0.0 0.0 0.0 53.9900653721735 10.335230341436628 10.335230341436628 12.26280941356464 0 0.6861818737241735 2.0 0.3807196863200844 0.3054621874040891 + + [{I|L}V]DP{I|L}NMHV;[{I|L}V]DP{I|L}GGMHV;[{I|L}V]D[RN]{[QG]|[NA]}HV;{[QV]|[N{I|L}]|[RA]|[KV]}PMHDV[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}PMHVD[{I|L}V];[Y{I|L}]YMHV[{I|L}V];[DP]{[WT]|[RM]}AHV[{I|L}V];{[DA]|[EG]}[VP]GMHV[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}PDMHV[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}V[DG]AHV[{I|L}V] 6.4401;5.2571;3.9839;0.75928;0.63875;0.38478;0.34751;0.34183;0.23439;0.14348 +;-;-;-;-;-;-;-;-;- + 323 + 1 1.074 71281.3 1.0 11402 4963 16352 HBL1_DMSO_200M_050219_2,16367 HBL1_DMSO_200M_050219_2,16367,LVDPLNMHV True True LVDPLNMHV 86.337617 519.278002917767 4535922.0 16352.0 ENSG00000138138|ENST00000680024|ATAD1;;nc|ENSG00000138138|Q8NBU5-2|ATAD1 7.609022776285808 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16368 86.347 552.0 418250.0 25 0 46598.0 + 39542 VAWLVAHV 8 148 447.7638435760572 893.5131342189144 2 447.7635986208916 MULTI CID FTMS 0 0 0 16352 157062.0 0.1997006784838244 -3 0.3111190795898437 16 Unmodified _VAWLVAHV_ ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24 64.08090720244739 0.1161809961245979 4 VAW{I|L}VAHV 8 0 + 75.163 0.0 0.0 8.4121 8.4121 80.431 0.0 0.0 0.0 31.8943306386236 0.8218675618734892 0.8218675618734892 0.8218675618734892 0 1.110924374808178 1.6989700043360187 0.0 0.0 + + VAW{I|L}VAHV;VAW{I|L}VAVH;VAWV{I|L}AHV;VAWV{I|L}AVH;VAW{I|L}VVAH;VAVW{I|L}AHV;VAVW{I|L}AVH;VAWV{I|L}VAH;VAVW{I|L}VAH;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}H[R{I|L}] 8.4121;8.3201;7.1151;7.0231;7.0038;6.19;6.098;5.7068;4.7817;4.0984 +;-;-;-;-;-;-;-;-;- + 690 + 1 1.074 180350.0 1.0 11403 4963 16352 HBL1_DMSO_200M_050219_2,16368 HBL1_DMSO_200M_050219_2,16368,VAWLVAHV True True VAWLVAHV 86.347309 447.763598620892 11176664.0 16352.0 nc|ENSG00000008838|O75448-2|MED24;;ENSG00000008838|ENST00000394128|MED24 7.68638801574707 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16370 86.352 5.2 13909000.0 25 0 1073300.0 + 22263 LPRLTPPVL 9 75 503.32679011973016 1004.6390273062603 2 503.3271667361259 MULTI CID FTMS 0 0 0 16369 9733464.0 0.663618562080149 -3 0.2646713256835937 1 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 52.268347100219714 0.0353964759249114 4 [{I|L}P][{I|L}T]RPPV{I|L} 9 2 + 69.543 0.0 0.0 6.9222 6.9222 94.715 0.0 0.0 0.0 14.488474775526186 56.3553779588527 14.488474775526186 69.54296558509682 0 0.8807196863200843 1.3010299956639813 1.1861818737241734 0.0 [{I|L}P][{I|L}T]RPPV{I|L} 6.9222 - 227 1 1.074 60366.2 1.0 11404 4964 16369 HBL1_DMSO_200M_050219_2,16370 HBL1_DMSO_200M_050219_2,16370,LPRLTPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16371 86.354 59.0 797700.0 25 0 167930.0 + 15545 IPWGPASI 8 77 420.73445722342944 839.4543615136589 2 420.7343932986259 MULTI CID FTMS 0 0 0 16369 844074.9375 0.4785190116823531 3 -0.28570556640625 2 Unmodified _IPWGPASI_ ENSG00000037042|ENST00000251412|TUBG2;ENSG00000131462|ENST00000251413|TUBG1 45.7499826716795 0.1592378023510922 4 [WP]G{I|L}[PA]S{I|L} 8 2 + 55.623 0.0 0.0 6.626 6.626 59.072 0.0 0.0 0.0 5.740312677277188 16.40978057358332 5.740312677277188 0.0 0 0.9247425010840048 1.3979400086720375 0.0 0.0 [WP]G{I|L}[PA]S{I|L};[WP]{I|L}G[PA]S{I|L};[WP]G[PA]{I|L}S{I|L};[WP]G[PA]S{I|L}{I|L};[{I|L}P]WG[PA]S{I|L};[WP][QP]{I|L}S{I|L};[WP]{I|L}[QP]S{I|L};[WP][QP]S{I|L}{I|L};[{I|L}P]W[QP]S{I|L} 6.626;6.626;6.626;6.1253;5.9422;5.8625;5.8625;5.3618;5.1787 -;-;-;-;+;-;-;-;- + 147 1 1.074 43778.2 1.0 11405 4964 16369 HBL1_DMSO_200M_050219_2,16371 HBL1_DMSO_200M_050219_2,16371,IPWGPASI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16372 86.355 85.0 1209800.0 25 0 192170.0 -1 0 87 1010.8120225752366 3029.414238325909 3 1011.147387683392 MULTI CID FTMS 0 0 0 16369 880008.9375 0.964821776683441 -1 0.0602798461914062 3 4 NEN{I|L}{I|L}{I|L} 6 -1 39.558 0.0 0.0 1.3058 0.0 0.0 2035.857672019072 294.1104453828088 2329.9681174018806 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.6421590589602533 NEN{I|L}{I|L}{I|L} 1.3058 - 746 + 1 1.074 75884.6 1.0 11406 4964 16369 HBL1_DMSO_200M_050219_2,16372 HBL1_DMSO_200M_050219_2,16372, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16373 86.358 96.0 509340.0 25 0 45650.0 42724 VVCPLYISA 9 71 482.76040439193247 963.506255850665 2 482.7606384158134 MULTI CID FTMS 0 0 0 16369 487960.875 0.9204881147533251 1 -0.05194091796875 4 Unmodified _VVCPLYISA_ ENSG00000065802|ENST00000264607|ASB1 26.34127834903884 0.1960301806784604 4 [Y{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}W 7 5 + 38.433 0.0 0.0 3.9889 3.9889 82.456 0.0 0.0 0.0 8.577957114533909 6.108791452218227 6.108791452218227 38.43326954115149 0 0.5 2.0 0.0 0.0 [Y{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}W 3.9889 - 140 1 1.074 46645.4 1.0 11407 4964 16369 HBL1_DMSO_200M_050219_2,16373 HBL1_DMSO_200M_050219_2,16373,VVCPLYISA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16374 86.359 60.0 1069600.0 25 0 118630.0 + 25960 NLPGPLQVNL 10 92 532.8093713617271 1063.6041897902542 2 532.8081542849541 MULTI CID FTMS 0 0 0 16369 437418.6875 0.1107854942293455 4 -0.3602676391601562 5 Unmodified _NLPGPLQVNL_ REV__ENSG00000006704|ENST00000424337|GTF2IRD1;REV__ENST00000486086.1_1_7:74015315-74016757:+|nuORF;REV__nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1;REV__nc|ENSG00000006704|Q9UHL9|GTF2IRD1 18.1463463914782 0.5430639438673815 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}R{[QG]|[NA]}[HN]{I|L} 9 -1 + 38.49 0.0 0.0 3.6188 3.6188 68.435 0.0 0.0 0.0 25.72564392714644 1.4950692809903714 1.4950692809903714 3.0102999566398125 0 0.3807196863200844 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}R{[QG]|[NA]}[HN]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[{I|L}V][HN]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}R{NN|[MP]|[D{I|L}]|[EV]}[HA]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}R{[QG]|[NA]}[HQ]V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[{I|L}V][HQ]V;RR{I|L}A{NN|[MP]|[D{I|L}]|[EV]}[HA]{I|L};RR{I|L}A{[QG]|[NA]}[HN]{I|L};RR{I|L}A{[QG]|[NA]}[HQ]V;RR{I|L}QQ[HN]{I|L} 3.6188;3.3358;3.3358;3.1702;2.8872;0.79822;0.72329;0.2747;0.11421 -;-;-;-;-;-;-;-;- 389 + 1 1.074 54874.5 1.0 11408 4964 16369 HBL1_DMSO_200M_050219_2,16374 HBL1_DMSO_200M_050219_2,16374,NLPGPLQVNL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16375 86.363 206.0 315630.0 25 0 25230.0 + 41610 VPPLTTLGI 9 89 455.7843962588707 909.5542395845414 2 455.7845641970634 MULTI CID FTMS 0 0 0 16369 261639.375 0.522322377726383 -2 0.1446762084960937 6 Unmodified _VPPLTTLGI_ REV__ENSG00000135723|ENST00000258201|FHOD1 32.116972079565 0.1225432171549407 4 [{I|L}A]P 3 -1 27.548 0.0 0.0 3.0288 0.0 0.0 0.0 625.357589764482 625.357589764482 3.608018480247779 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]P 3.0288 - 146 1 1.074 54381.5 1.0 11409 4964 16369 HBL1_DMSO_200M_050219_2,16375 HBL1_DMSO_200M_050219_2,16375,VPPLTTLGI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16376 86.372 487.0 170620.0 25 0 13653.0 -1 SQCESEDLGI 10 126 569.2386305562453 1136.4627081792903 2 569.2392455935478 MULTI CID FTMS 0 0 0 16369 164397.421875 0.5083907337068497 3 -0.28570556640625 7 Carbamidomethyl (C) _SQC(Carbamidomethyl (C))ESEDLGI_ ENSG00000108021|ENST00000695737|TASOR2;nc|ENSG00000108021|Q5VWN6-2|TASOR2 15.847184025352805 0.5816416552707754 4 {[QS]|[NT]}{[C(Carbamidomethyl (C))G]|[NC]}DWG 7 -1 26.997 0.0 0.0 2.3756 0.0 0.0 0.0 343.1616577244656 343.1616577244656 5.850910329641359 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.1803115997617927 0.6989700043360187 {[QS]|[NT]}{[C(Carbamidomethyl (C))G]|[NC]}DWG 2.3756 - 226 1 1.074 68684.5 1.0 11410 4964 16369 HBL1_DMSO_200M_050219_2,16376 HBL1_DMSO_200M_050219_2,16376,SQCESEDLGI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16377 86.385 800.0 189230.0 25 0 16614.0 + 23627 LTQEAILSLTV 11 157 594.3480657398883 1186.6815785465765 2 594.3483154177666 MULTI CID FTMS 0 0 0 16369 137838.828125 0.5098798970909799 -2 0.1446762084960937 8 Unmodified _LTQEAILSLTV_ ENST00000592937.1_1_19:2477233-2477596:+|nuORF 70.33199760932243 0.0314424197347918 4 {[TV]|[{I|L}S]}[DN]{I|L}{I|L}S{I|L} 8 6 54.712 0.0 0.0 4.6105 0.0 0.0 0.0 328.1837196872163 328.1837196872163 14.01278227804869 0.0 0.0 0.0 0 0.25 1.6989700043360187 2.006718036600075 0.3807196863200844 {[TV]|[{I|L}S]}[DN]{I|L}{I|L}S{I|L} 4.6105 - 3573 1 1.074 114873.9 0.6899999976158142 11411 4964 16369 HBL1_DMSO_200M_050219_2,16377 HBL1_DMSO_200M_050219_2,16377,LTQEAILSLTV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16378 86.399 800.0 278260.0 25 0 35501.0 + 34797 SQDYPTLAF 9 110 1041.4918618567422 1040.4845853901422 1 1041.490527331829 MULTI CID FTMS 0 0 0 16369 129229.8984375 0.1306114244532259 -5 0.504241943359375 9 Unmodified _SQDYPTLAF_ ENSG00000134697|ENST00000373062|GNL2 83.42873516780209 0.0166860047644719 4 {[QS]|[NT]}DYPT{I|L}A{M(Oxidation (M))|F} 9 0 + 79.606 0.0 0.0 7.6508 7.6508 85.109 0.0 0.0 0.0 4.172268755754658 16.478174818886373 4.172268755754658 4.172268755754658 0 2.166386562212267 0.0 1.548455006504028 0.2614393726401688 + + {[QS]|[NT]}DYPT{I|L}A{M(Oxidation (M))|F};[TP]{I|L}SQDYA{M(Oxidation (M))|F};[TP]{I|L}A[SG]DYA{M(Oxidation (M))|F};[TP]{I|L}SQDAY{M(Oxidation (M))|F};[TP]{I|L}A[SG]DAY{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}SYPT{I|L}A{M(Oxidation (M))|F};[TP]{I|L}S[AG]DYA{M(Oxidation (M))|F};[TP]{I|L}YDSQA{M(Oxidation (M))|F};{[QS]|[NT]}DY{I|L}[TP]A{M(Oxidation (M))|F};[TP]YDNT{I|L}A{M(Oxidation (M))|F} 7.6508;7.2499;7.155;6.7393;6.6445;6.4935;6.3649;6.2779;6.146;6.1356 +;-;-;-;-;-;-;-;-;- + 6584 1 1.074 139549.7 0.6299999952316284 11412 4964 16369 HBL1_DMSO_200M_050219_2,16378 HBL1_DMSO_200M_050219_2,16378,SQDYPTLAF True True SQDYPTLAF 86.399256 1041.49052733183 24409138.0 16369.0 ENSG00000134697|ENST00000373062|GNL2 8.023506005605062 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16380 86.404 49.0 867570.0 25 0 57329.0 -1 0 52 1029.831039667116 3086.471289601548 3 1030.166918933392 MULTI CID FTMS 0 0 0 16379 1516453.5 0.6467301489550712 -1 0.05194091796875 1 4 [MN]MV 4 -1 40.005 0.0 0.0 1.2961 0.0 0.0 0.0 2608.2012603713024 2608.2012603713024 32.557809497117844 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [MN]MV 1.2961 - 29 + 1 1.083 38539.7 1.0 11413 4965 16379 HBL1_DMSO_200M_050219_2,16380 HBL1_DMSO_200M_050219_2,16380, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16381 86.406 38.0 1509300.0 25 0 145190.0 + 12922 GYPEVALHF 9 69 516.7609705695876 1031.507388205975 2 516.7614013552666 MULTI CID FTMS 0 0 0 16379 1052723.625 0.873541575843346 -1 0.05194091796875 2 Unmodified _GYPEVALHF_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 29.081581746732265 0.1611639662936252 4 [YG]PEVA{I|L}H{M(Oxidation (M))|F} 9 0 + 68.567 0.0 0.0 6.6472 6.6472 90.719 0.0 0.0 0.0 14.463950151760656 11.706962271689749 11.706962271689749 13.979400086720377 0 0.3494850021680094 2.0 0.0 0.0 + + [YG]PEVA{I|L}H{M(Oxidation (M))|F};[YG]PEVA{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};[YG][YV]EVR{M(Oxidation (M))|F};[H{I|L}][HV]VEP{[DS]|[MA]|[CV]|TT};[H{I|L}]AV{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{[DS]|[MA]|[CV]|TT};[H{I|L}]AVE[YV]{[DS]|[MA]|[CV]|TT} 6.6472;5.292;3.1824;2.4108;1.2706;0.80808 +;-;-;-;-;- + 121 + 1 1.083 50829.3 1.0 11414 4965 16379 HBL1_DMSO_200M_050219_2,16381 HBL1_DMSO_200M_050219_2,16381,GYPEVALHF False True GYPEVALHF 86.40559 516.761401355267 43641363.0 16379.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 7.227536042531331 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16382 86.408 94.0 786820.0 25 0 132350.0 + 12561 GVIDACIKL 9 88 466.2679518052082 930.5213506772166 2 466.2681762576103 MULTI CID FTMS 0 0 0 16379 453659.625 0.8763578026926809 -1 0.05194091796875 3 Unmodified _GVIDACIKL_ ENSG00000185009|ENST00000355264|AP3M1 36.12702656103203 0.0967173616627612 4 [VG]{I|L}DAC{I|L}K{I|L} 9 0 + 64.112 0.0 0.0 6.8899 6.8899 92.156 0.0 0.0 0.0 40.00956171512947 12.98332479720628 12.98332479720628 16.591218246911417 0 0.6643943297944485 2.0 0.0 0.2396518287104437 + + [VG]{I|L}DAC{I|L}K{I|L};[VG]{I|L}D[WK]T{I|L};[{I|L}A]{[CP]|[EA]}AC{I|L}K{I|L};[{I|L}A]{[CP]|[EA]}[WK]T{I|L} 6.8899;5.1069;4.0266;2.2436 +;-;-;- + 179 + 1 1.083 61723.2 1.0 11415 4965 16379 HBL1_DMSO_200M_050219_2,16382 HBL1_DMSO_200M_050219_2,16382,GVIDACIKL True True GVIDACIKL 86.407633 466.26817625761 4791710.0 16379.0 ENSG00000185009|ENST00000355264|AP3M1 8.267322222391764 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16383 86.41 142.0 559590.0 25 0 77161.0 + 11565 GIYTGFIKV 9 99 499.2902375562403 996.5659221792806 2 499.2899963259697 MULTI CID FTMS 0 0 0 16379 290387.875 0.0691510344035998 -2 0.1122207641601562 4 Unmodified _GIYTGFIKV_ ENSG00000153179|ENST00000542104|RASSF3 30.63653989081413 0.1413794767160703 4 {[VA]|[{I|L}G]}YT 4 5 47.747 0.0 0.0 4.7912 0.0 0.0 0.0 559.3252020189907 559.3252020189907 27.63144819030744 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.4247425010840047 0.0 + {[VA]|[{I|L}G]}YT 4.7912 + + 212 + 1 1.083 65070.5 1.0 11416 4965 16379 HBL1_DMSO_200M_050219_2,16383 HBL1_DMSO_200M_050219_2,16383,GIYTGFIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16384 86.414 167.0 600350.0 25 0 44085.0 + 29613 QLVVELKDI 9 123 528.8192103613729 0 528.8194457888603 PEAK CID FTMS 0 0 0 16379 281474.90625 0.0244728866886927 -3 0.1966171264648437 5 Unmodified _QLVVELKDI_ ENSG00000173230|ENST00000614479|GOLGB1;ENST00000472829.1_1_3:121448028-121448843:-|nuORF;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1 53.832793166522166 0.0232989711577274 4 VD{I|L}{I|L}EK 6 7 43.38 0.0 0.0 4.1094 0.0 0.0 241.1454267034012 114.05658899478748 355.20201569818863 0.0 0.0 0.0 0.0 0 1.079689690656103 0.0 0.75 0.1462566630072955 VD{I|L}{I|L}EK 4.1094 - 271 + 1 1.083 82482.1 1.0 11417 4965 16379 HBL1_DMSO_200M_050219_2,16384 HBL1_DMSO_200M_050219_2,16384,QLVVELKDI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16385 86.417 163.0 348430.0 25 0 21265.0 + 8267 EQIKFFEEV 9 84 584.7981735286636 1167.581794124127 2 584.7984496951103 MULTI CID FTMS 0 0 0 16379 237998.6875 0.1685547141445894 -2 0.1122207641601562 6 Unmodified _EQIKFFEEV_ ENSG00000143155|ENST00000367833|TIPRL;nc|ENSG00000143155|O75663-2|TIPRL 29.081581746732265 0.1611639662936252 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKE{I|L} 6 6 27.224 0.0 0.0 2.3316 0.0 0.0 0.0 371.1525088060209 371.1525088060209 -0.9190199032181248 0.0 -0.9190199032181248 0.0 0 0.0 0.0 0.7302046884880937 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKE{I|L} 2.3316 - 679 1 1.083 50309.7 1.0 11418 4965 16379 HBL1_DMSO_200M_050219_2,16385 HBL1_DMSO_200M_050219_2,16385,EQIKFFEEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16386 86.425 471.0 279400.0 25 0 36330.0 43641 YAMKVLKKASL 11 85 417.9223178514591 1250.7451241545773 3 417.9223815798759 MULTI CID FTMS 0 0 0 16379 212738.96875 0.3512756176692954 -2 0.1122207641601562 7 Unmodified _YAMKVLKKASL_ ENSG00000072133|ENST00000262752|RPS6KA6;nc|ENSG00000072133|Q9UK32-2|RPS6KA6 1.1933415558491238 0.8695176722560516 4 P 1 11 0.48455 0.0 0.0 0.038741 0.0 0.0 1030.6139576280132 120.05079065494374 1150.664748282957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.038741 - 10 + 1 1.083 105733.6 1.0 11419 4965 16379 HBL1_DMSO_200M_050219_2,16386 HBL1_DMSO_200M_050219_2,16386,YAMKVLKKASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16387 86.431 317.0 343760.0 25 0 38700.0 + 18113 KTLEEFQDVYL 11 110 692.8539324759356 0 692.8544799685478 PEAK CID FTMS 0 0 0 16379 160259.3125 1.0 0 0.0 8 Unmodified _KTLEEFQDVYL_ ENSG00000050748|ENST00000452135|MAPK9;ENSG00000109339|ENST00000641462|MAPK10;ENST00000397072.7_1_5:179665329-179706839:-|nuORF;ENST00000523135.1_1_5:179680521-179691830:-|nuORF;nc|ENSG00000050748|P45984-2|MAPK9;nc|ENSG00000050748|P45984-3|MAPK9;nc|ENSG00000050748|P45984-4|MAPK9;nc|ENSG00000050748|P45984-5|MAPK9;nc|ENSG00000109339|P53779-2|MAPK10;nc|ENSG00000109339|P53779-3|MAPK10 23.96415052054722 0.3032758582346839 4 YVDQ{M(Oxidation (M))|F}[PA]V{I|L} 9 8 49.659 0.0 0.0 3.5888 0.0 0.0 131.0928003993336 217.06218897037343 348.1549893697071 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.8494850021680094 0.0 YVDQ{M(Oxidation (M))|F}[PA]V{I|L} 3.5888 - 877 + 1 1.083 83342.7 1.0 11420 4965 16379 HBL1_DMSO_200M_050219_2,16387 HBL1_DMSO_200M_050219_2,16387,KTLEEFQDVYL False True KTLEEFQDVYL 86.431098 692.854479968548 1470065.5 16379.0 nc|ENSG00000050748|P45984-5|MAPK9;;ENST00000523135.1_1_5:179680521-179691830:-|nuORF;;nc|ENSG00000050748|P45984-3|MAPK9;;ENSG00000050748|ENST00000452135|MAPK9;;nc|ENSG00000109339|P53779-3|MAPK10;;nc|ENSG00000050748|P45984-2|MAPK9;;nc|ENSG00000109339|P53779-2|MAPK10;;ENSG00000109339|ENST00000641462|MAPK10;;nc|ENSG00000050748|P45984-4|MAPK9;;ENST00000397072.7_1_5:179665329-179706839:-|nuORF 6.220329443613688 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16388 86.445 800.0 235640.0 25 0 43321.0 + 9577 FLISFRRLVT 10 130 626.3800149034347 1250.7454768736693 2 626.3798095583916 MULTI CID FTMS 0 0 0 16379 145694.734375 0.2688944637598208 -2 0.1122207641601562 9 Unmodified _FLISFRRLVT_ REV__ENSG00000116704|ENST00000235345|SLC35D1;REV__nc|ENSG00000116704|Q9NTN3-2|SLC35D1 6.723162845929126 0.6955379296933136 4 [{I|L}V]V{M(Oxidation (M))|F}MC(Carbamidomethyl (C))NQ 8 -1 16.833 0.0 0.0 1.3458 0.0 0.0 0.0 256.2605274930631 256.2605274930631 6.999868935529751 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [{I|L}V]V{M(Oxidation (M))|F}MC(Carbamidomethyl (C))NQ 1.3458 - 184 1 1.083 141569.3 0.7200000286102295 11421 4965 16379 HBL1_DMSO_200M_050219_2,16388 HBL1_DMSO_200M_050219_2,16388,FLISFRRLVT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16389 86.459 800.0 358080.0 25 0 11701.0 -1 0 172 1002.9753851023056 2003.9362172714111 2 1002.975939929485 MULTI CID FTMS 0 0 0 16379 142509.703125 0.2943333078390919 -2 0.1122207641601562 10 4 [NP]{I|L}NEVWQDG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 17 -1 + 98.289 0.0 0.0 4.9048 4.9048 69.787 0.0 0.0 0.0 8.001752013041 -6.177898707733419 -6.177898707733419 1.283249565841487 0 0.0 1.0 0.7614393726401688 1.7218487496163564 [NP]{I|L}NEVWQDG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]VQEVWQDG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}N{I|L}DWQDG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]N{I|L}EVWQDG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}ND{I|L}WQDG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]VQ{I|L}DWQDG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]VQD{I|L}WQDG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]N{I|L}{I|L}DWQDG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}DQVWQDG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]N{I|L}D{I|L}WQDG{M(Oxidation (M))|F}{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.9048;4.8408;4.8169;4.7546;4.7546;4.7529;4.6905;4.6667;4.6044;4.6044 -;-;-;-;-;-;-;-;-;- 445776 1 1.083 182320.1 0.6800000071525574 11422 4965 16379 HBL1_DMSO_200M_050219_2,16389 HBL1_DMSO_200M_050219_2,16389, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16390 86.464 281.0 262160.0 25 0 32342.0 + 36427 SYYEEALEL 9 107 558.7589754336129 1115.5033979340258 2 558.7582885622978 MULTI CID FTMS 0 0 0 16379 119728.984375 0.9516836417926536 -1 0.05194091796875 11 Unmodified _SYYEEALEL_ ENSG00000213380|ENST00000306875|COG8 21.74664581756881 0.2544899275067181 4 {[TV]|[{I|L}S]}M 3 7 20.132 0.0 0.0 1.8047 0.0 0.0 0.0 781.3268897155289 781.3268897155289 2.3799037367196085 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.2059771852360797 0.0 {[TV]|[{I|L}S]}M 1.8047 - 154 1 1.083 57833.5 1.0 11423 4965 16379 HBL1_DMSO_200M_050219_2,16390 HBL1_DMSO_200M_050219_2,16390,SYYEEALEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16391 86.478 800.0 215650.0 25 0 19161.0 + 30790 RIFGESIMIGV 11 160 619.3321850192038 1236.6498171052076 2 619.3306152224541 MULTI CID FTMS 0 0 0 16379 88287.3671875 0.6200287563677479 -1 0.05194091796875 12 Oxidation (M) _RIFGESIM(Oxidation (M))IGV_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35;nc|ENSG00000163002|Q8NFH5-3|NUP35 55.23464941255904 0.0886405999673349 4 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}V[VS]S{I|L}{M(Oxidation (M))|F}{I|L}GV 12 4 + 82.807 0.0 0.0 6.696 6.696 86.223 0.0 0.0 0.0 7.7815125038364386 6.611814434466197 6.611814434466197 7.7815125038364386 0 1.16944517631652 2.0 1.1549471895720984 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}V[VS]S{I|L}{M(Oxidation (M))|F}{I|L}GV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GV[VS]S{I|L}{M(Oxidation (M))|F}{I|L}GV;{[VA]|[{I|L}G]}{I|L}D[YQ]{I|L}{M(Oxidation (M))|F}{I|L}GV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[RV]S{I|L}{M(Oxidation (M))|F}{I|L}GV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R[VS]S{I|L}{M(Oxidation (M))|F}{I|L}GV;{[VA]|[{I|L}G]}[YT][PA]S{I|L}{M(Oxidation (M))|F}{I|L}GV;[{I|L}T]CV[VS]S{I|L}{M(Oxidation (M))|F}{I|L}GV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[RV]S{I|L}{M(Oxidation (M))|F}{I|L}GV;{[VA]|[{I|L}G]}[KC][C(Carbamidomethyl (C))K]{I|L}{M(Oxidation (M))|F}{I|L}GV;{[VA]|[{I|L}G]}{I|L}C[R{M(Oxidation (M))|F}]{I|L}{M(Oxidation (M))|F}{I|L}GV 6.696;6.0668;5.918;5.9008;5.7756;5.7606;5.5261;5.3504;5.2501;4.92 -;-;-;-;-;-;-;-;-;- 5239 1 1.083 127216.9 0.6000000238418579 11424 4965 16379 HBL1_DMSO_200M_050219_2,16391 HBL1_DMSO_200M_050219_2,16391,RIFGESIMIGV True False RIFGESIMIGV 86.477816 619.330615222454 996093.625 16379.0 ENSG00000163002|ENST00000295119|NUP35;;nc|ENSG00000163002|Q8NFH5-2|NUP35;;nc|ENSG00000163002|Q8NFH5-3|NUP35 7.797285079956055 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16392 86.493 800.0 92899.0 25 0 6470.4 + 32574 SASTNSIFQA 10 88 1025.4943456665935 1024.4870691999936 1 1026.495776355267 MULTI CID FTMS 0 0 0 16379 78612.890625 0.403020959997693 4 -0.44537353515625 13 Unmodified _SASTNSIFQA_ REV__ENSG00000164309|ENST00000446378|CMYA5 18.373094154950223 0.5392593366289069 4 PT[DP]T{I|L}D 7 -1 31.546 0.0 0.0 3.0792 0.0 0.0 0.0 282.14570032291255 282.14570032291255 5.245681914907365 0.0 0.0 0.0 0 0.0 0.0 1.024227503252014 0.0 PT[DP]T{I|L}D 3.0792 - 1126 + 1 1.083 55801.3 0.6000000238418579 11425 4965 16379 HBL1_DMSO_200M_050219_2,16392 HBL1_DMSO_200M_050219_2,16392,SASTNSIFQA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16394 86.498 33.0 1619400.0 25 0 221760.0 + 21057 LPAELINQI 9 79 505.79784277119705 1009.581132609194 2 505.7978088259697 MULTI CID FTMS 0 0 0 16393 991504.9375 0.0882566725806799 5 -0.5547027587890625 1 Unmodified _LPAELINQI_ ENSG00000160877|ENST00000292431|NACC1 48.345845343767074 0.0439967357579942 4 [{I|L}P]AE{I|L}{I|L}NQ{I|L} 9 0 + 41.237 0.0 0.0 4.0846 4.0846 77.925 0.0 0.0 0.0 9.33053210369387 7.944539621753535 7.944539621753535 9.208187539523747 0 0.6069758080123702 1.3010299956639813 0.3494850021680094 0.0 + + [{I|L}P]AE{I|L}{I|L}NQ{I|L};[{I|L}P]AE{I|L}{I|L}GGQ{I|L};[PA]E{I|L}{I|L}{I|L}NQ{I|L};[PA]{I|L}E{I|L}{I|L}NQ{I|L};[PA]E{I|L}{I|L}{I|L}GGQ{I|L};[VP][DV]{I|L}{I|L}NQ{I|L};[PA]{I|L}E{I|L}{I|L}GGQ{I|L};[VP][DV]{I|L}{I|L}GGQ{I|L} 4.0846;3.1725;3.1604;2.3233;2.2483;1.9954;1.4112;1.0834 +;-;-;-;-;-;-;- + 173 1 1.091 45651.0 1.0 11426 4966 16393 HBL1_DMSO_200M_050219_2,16394 HBL1_DMSO_200M_050219_2,16394,LPAELINQI True True LPAELINQI 86.497899 505.79780882597 202795040.0 16393.0 ENSG00000160877|ENST00000292431|NACC1 4.354908466339111 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16395 86.499 38.0 1152400.0 25 0 117440.0 + 30028 QTPEFFQDV 9 74 555.7588849302487 1109.5032169272972 2 555.7591430544853 MULTI CID FTMS 0 0 0 16393 1407347.125 0.9411953978403657 -1 0.09381103515625 2 Unmodified _QTPEFFQDV_ ENSG00000169710|ENST00000306749|FASN 37.97399986684836 0.0865783450051559 4 [DV]Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F} 6 7 24.525 0.0 0.0 2.2104 0.0 0.0 0.0 357.13368502715974 357.13368502715974 5.562847537579859 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9247425010840048 0.3807196863200844 [DV]Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F} 2.2104 - 351 1 1.091 40459.7 1.0 11427 4966 16393 HBL1_DMSO_200M_050219_2,16395 HBL1_DMSO_200M_050219_2,16395,QTPEFFQDV True True QTPEFFQDV 86.499078 555.759143054485 52535700.0 16393.0 ENSG00000169710|ENST00000306749|FASN 6.27931547164917 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16396 86.502 137.0 477090.0 25 0 51384.0 + 4421 DAVTAFESI 9 92 476.7351930362423 951.4558331392848 2 476.7351867556572 MULTI CID FTMS 0 0 0 16393 494080.03125 0.5729931075832675 3 -0.3515625 3 Unmodified _DAVTAFESI_ ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;nc|ENSG00000183054|Q99666-2|RGPD5;nc|ENSG00000187627|P0DJD0|RGPD1 42.09456458481378 0.0639583784996157 4 {[DA]|[EG]}VTA 5 4 34.27 0.0 0.0 3.6018 0.0 0.0 0.0 491.2148717957878 491.2148717957878 12.816206019771528 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.0 0.0 + {[DA]|[EG]}VTA 3.6018 + + 173 1 1.091 52796.4 1.0 11428 4966 16393 HBL1_DMSO_200M_050219_2,16396 HBL1_DMSO_200M_050219_2,16396,DAVTAFESI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16397 86.504 89.0 746290.0 25 0 110750.0 + 25720 NIIPRFVQV 9 69 543.3271053479655 1084.6396577627308 2 543.3272582888603 MULTI CID FTMS 0 0 0 16393 451940.75 0.4590968649960173 -1 0.09381103515625 4 Unmodified _NIIPRFVQV_ ENSG00000171943|ENST00000367123|SRGAP2C;ENSG00000196369|ENST00000641863|SRGAP2B;ENSG00000266028|ENST00000573034|SRGAP2;nc|ENSG00000196369|P0DMP2|SRGAP2B 37.97399986684836 0.0865783450051559 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[WT]|[RM]}{I|L}VN{I|L} 9 4 + 49.089 0.0 0.0 4.5259 4.5259 84.263 0.0 0.0 0.0 5.149087242336776 36.614999749340384 5.149087242336776 33.59189699011424 0 1.1677353201839438 2.0 0.0 0.2059771852360797 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[WT]|[RM]}{I|L}VN{I|L};[Q{I|L}]V{[WT]|[RM]}{I|L}VN{I|L} 4.5259;1.4288 -;- 59 1 1.091 56682.3 1.0 11429 4966 16393 HBL1_DMSO_200M_050219_2,16397 HBL1_DMSO_200M_050219_2,16397,NIIPRFVQV True True NIIPRFVQV 86.503812 543.32725828886 16611475.0 16393.0 ENSG00000171943|ENST00000367123|SRGAP2C;;nc|ENSG00000196369|P0DMP2|SRGAP2B;;ENSG00000196369|ENST00000641863|SRGAP2B;;ENSG00000266028|ENST00000573034|SRGAP2 5.750966548919678 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16398 86.505 63.0 657720.0 25 0 99938.0 + -1 DIYSKFDVI 9 73 550.2896257805064 1098.5646986278127 2 550.2883178591728 MULTI CID FTMS 0 0 0 16393 374507.21875 1.0 0 0.0 5 Oxidation (M) _DLAVPM(Oxidation (M))PEVL_ nc|ENSG00000106617|Q9UGJ0-3|PRKAG2;ENST00000546531.5_1_12:49396684-49399341:-|nuORF;ENSG00000181929|ENST00000548065|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1;ENSG00000106617|ENST00000287878|PRKAG2;nc|ENSG00000106617|Q9UGJ0-2|PRKAG2;nc|ENSG00000181929|P54619-2|PRKAG1 13.90604991867851 0.6142120002215601 4 {NN|[MP]|[D{I|L}]|[EV]}YS 4 -1 35.049 0.0 0.0 3.1905 0.0 0.0 0.0 617.3303316705686 617.3303316705686 4.0238820059232125 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}YS 3.1905 - 75 + 1 1.091 41377.4 1.0 11430 4966 16393 HBL1_DMSO_200M_050219_2,16398 HBL1_DMSO_200M_050219_2,16398,DLAVPMPEVL False False DIYSKFDVI 86.505356 550.288317859173 3631293.0 16393.0 nc|ENSG00000106617|Q9UGJ0-3|PRKAG2;;ENST00000546531.5_1_12:49396684-49399341:-|nuORF;;ENSG00000181929|ENST00000548065|PRKAG1;;nc|ENSG00000181929|P54619-3|PRKAG1;;ENSG00000106617|ENST00000287878|PRKAG2;;nc|ENSG00000106617|Q9UGJ0-2|PRKAG2;;nc|ENSG00000181929|P54619-2|PRKAG1 2.760483980178833 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16399 86.508 129.0 677540.0 25 0 65998.0 + 2909 AVFPHLTVV 9 97 491.79031380013663 981.5660746670732 2 491.7903625369072 MULTI CID FTMS 0 0 0 16393 363246.75 0.6061637138518722 -1 0.09381103515625 6 Unmodified _AVFPHLTVV_ ENSG00000134825|ENST00000537328|TMEM258 28.486842064014134 0.1687311288560894 4 [H{I|L}]PTV{M(Oxidation (M))|F}AVV 9 7 + 45.45 0.0 0.0 4.6304 4.6304 67.618 0.0 0.0 0.0 7.887254899964354 4.762036441594191 4.762036441594191 0.7253516330846352 0 0.2887254899964357 1.0969100130080565 1.0501648626366045 0.0 [H{I|L}]PTV{M(Oxidation (M))|F}AVV;[H{I|L}]P{M(Oxidation (M))|F}TVAVV;[H{I|L}]PT{M(Oxidation (M))|F}VAVV;[H{I|L}]M{I|L}TVAVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}TVAVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}TV{M(Oxidation (M))|F}AVV;[H{I|L}]TPV{M(Oxidation (M))|F}AVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}TVAVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}T{M(Oxidation (M))|F}VAVV;[H{I|L}]TP{M(Oxidation (M))|F}VAVV 4.6304;4.5565;4.539;4.2498;3.8269;3.8196;3.7694;3.7457;3.7281;3.678 -;-;-;-;-;-;-;-;-;- 526 1 1.091 69902.2 1.0 11431 4966 16393 HBL1_DMSO_200M_050219_2,16399 HBL1_DMSO_200M_050219_2,16399,AVFPHLTVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16400 86.511 170.0 360570.0 25 0 19947.0 + 15680 QIGAKFWEV 9 117 539.2907837093079 1076.5670144854157 2 539.2905761599541 MULTI CID FTMS 0 0 0 16393 286027.90625 0.4837798910544337 2 -0.2145156860351562 7 Unmodified _IQQPAFFLN_ ENSG00000261456|ENST00000568584|TUBB8;ENSG00000137267|ENST00000333628|TUBB2A;ENSEMBL:ENSBTAP00000025008;ENSG00000196230|ENST00000327892|TUBB;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000258947|ENST00000315491|TUBB3;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;ENST00000489942.1_1_6:3155224-3157697:-|nuORF;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000173213|ENST00000308911|TUBB8B;ENST00000554927.1_1_16:89989809-89999206:+|nuORF;ENST00000518096.1_1_8:30209523-30210210:+|nuORF 20.453626601364224 0.2830276176381075 4 [Q{I|L}]Q 3 6 32.949 0.0 0.0 3.0606 0.0 0.0 0.0 704.3355196588499 704.3355196588499 7.097535859201315 0.0 0.0 0.0 0 0.5501648626366046 2.0 0.0 0.0 + [Q{I|L}]Q 3.0606 + + 350 + 1 1.091 51911.1 1.0 11432 4966 16393 HBL1_DMSO_200M_050219_2,16400 HBL1_DMSO_200M_050219_2,16400,IQQPAFFLN False False QIGAKFWEV 86.511322 539.290576159954 5091992.5 16393.0 ENSG00000261456|ENST00000568584|TUBB8;;ENSG00000137267|ENST00000333628|TUBB2A;;ENSEMBL:ENSBTAP00000025008;;ENSG00000196230|ENST00000327892|TUBB;;ENSG00000104833|ENST00000264071|TUBB4A;;ENSG00000258947|ENST00000315491|TUBB3;;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;;ENST00000489942.1_1_6:3155224-3157697:-|nuORF;;ENSG00000137285|ENST00000259818|TUBB2B;;ENSG00000188229|ENST00000340384|TUBB4B;;ENSG00000173213|ENST00000308911|TUBB8B;;ENST00000554927.1_1_16:89989809-89999206:+|nuORF;;ENST00000518096.1_1_8:30209523-30210210:+|nuORF 6.19968318939209 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16401 86.525 800.0 335680.0 25 0 9782.6 -1 0 142 1066.5047927952744 2130.995032657349 2 1067.007250964642 MULTI CID FTMS 0 0 0 16393 273691.25 0.8017363698445799 -1 0.09381103515625 8 4 {[TV]|[{I|L}S]}AADTA{I|L}YC(Carbamidomethyl (C)) 10 -1 61.951 0.0 0.0 2.9071 0.0 0.0 0.0 1062.4921999759615 1062.4921999759615 0.2452362082578361 0.0 0.0 0.0 0 0.9247425010840048 1.3010299956639813 2.418826521534556 0.0 {[TV]|[{I|L}S]}AADTA{I|L}YC(Carbamidomethyl (C)) 2.9071 - 46736 1 1.091 166234.3 0.9700000286102296 11433 4966 16393 HBL1_DMSO_200M_050219_2,16401 HBL1_DMSO_200M_050219_2,16401, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16402 86.528 151.0 535640.0 25 0 38618.0 2772 ATPLSFLFF 9 96 521.7860799278977 1041.5576069225954 2 521.7870971560478 MULTI CID FTMS 0 0 0 16393 219793.828125 0.3310925258621517 -2 0.145751953125 9 Unmodified _ATPLSFLFF_ nc|ENSG00000197503|Q96M19|LINC00477 21.74664581756881 0.2544899275067181 4 [TA]P 3 6 28.952 0.0 0.0 2.7797 0.0 0.0 0.0 769.3995406942457 769.3995406942457 6.276362525516532 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [TA]P 2.7797 + + 71 + 1 1.091 69997.0 1.0 11434 4966 16393 HBL1_DMSO_200M_050219_2,16402 HBL1_DMSO_200M_050219_2,16402,ATPLSFLFF False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 16403 86.535 382.0 382700.0 25 0 61194.0 -1 0 110 591.3505627095691 590.343286242969 1 591.3509399294853 MULTI CID FTMS 0 0 0 16393 206941.65625 0.779577802703675 -1 0.09381103515625 10 4 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}Q{I|L} 5 -1 + 38.837 0.0 0.0 6.5787 6.5787 74.314 0.0 0.0 0.0 0.1459711854225602 0.1459711854225602 0.1459711854225602 0.1459711854225602 0 1.024227503252014 0.0 0.2396518287104437 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}Q{I|L};{M(Oxidation (M))|F}A{I|L}Q{I|L};[{I|L}A]{M(Oxidation (M))|F}Q{I|L};[Q{I|L}]A{M(Oxidation (M))|F}{I|L};[{I|L}A]GA{M(Oxidation (M))|F}{I|L};[AG]{I|L}A{M(Oxidation (M))|F}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[AG]{I|L};[{I|L}A]{M(Oxidation (M))|F}[AG]{I|L};[{I|L}A]Q{M(Oxidation (M))|F}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}{I|L} 6.5787;6.5539;6.4372;6.3823;5.7477;5.4565;4.9622;4.8208;4.6978;4.541 -;-;-;-;-;-;-;-;-;- 160 1 1.091 111416.3 1.0 11435 4966 16393 HBL1_DMSO_200M_050219_2,16403 HBL1_DMSO_200M_050219_2,16403, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16404 86.54 283.0 327820.0 25 0 56834.0 -1 LASTECFL 8 96 470.7264787384386 939.4384045436772 2 470.7263061404228 MULTI CID FTMS 0 0 0 16393 177257.46875 0.0892509922932686 8 -0.94580078125 11 Carbamidomethyl (C) _LASTEC(Carbamidomethyl (C))FL_ ENSG00000196248|ENST00000641123|OR10S1;nc|ENSG00000196248|Q8NGN2|OR10S1 26.34127834903884 0.4900704351052977 4 {I|L}S 2 -1 41.281 0.0 0.0 4.3943 0.0 0.0 0.0 736.2994401258632 736.2994401258632 23.51723712831241 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.4247425010840047 0.0 {I|L}S 4.3943 - 61 + 1 1.091 75064.0 1.0 11436 4966 16393 HBL1_DMSO_200M_050219_2,16404 HBL1_DMSO_200M_050219_2,16404,LASTECFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16405 86.554 800.0 207310.0 25 0 30559.0 + 9287 FIDEQNYIL 9 179 577.7898213629974 1153.5650897927949 2 577.7903320193291 MULTI CID FTMS 0 0 0 16393 170393.875 0.2388232625933561 -3 0.2060317993164062 12 Unmodified _FIDEQNYIL_ ENSG00000157212|ENST00000404141|PAXIP1;ENST00000457196.5_1_7:154735861-154782774:-|nuORF;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;nc|ENSG00000157212|Q6ZW49-1|PAXIP1;nc|ENSG00000157212|Q6ZW49-2|PAXIP1 40.23920728925047 0.0741434193262949 4 [{M(Oxidation (M))|F}V]EEQNY{I|L}{I|L} 9 2 + 55.886 0.0 0.0 4.8446 4.8446 73.865 0.0 0.0 0.0 3.533718971458555 9.889917747712644 3.533718971458555 3.533718971458555 0 0.6549471895720985 2.0 0.2742275032520141 0.805462187404089 [{M(Oxidation (M))|F}V]EEQNY{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QNY{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EQNY{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QNY{I|L}{M(Oxidation (M))|F}{I|L}{I|L};[{M(Oxidation (M))|F}V]EE[AG]NY{I|L}{I|L};[{M(Oxidation (M))|F}V]EEQGGY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}EDY{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DEQNY{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}{I|L}NY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}C(Carbamidomethyl (C))N{M(Oxidation (M))|F}{I|L}{I|L}{I|L} 4.8446;4.5383;4.4793;4.169;4.0464;4.0464;3.9408;3.9381;3.8512;3.7567 -;-;-;-;-;-;-;+;-;- + 4439 1 1.091 123812.4 0.7799999713897705 11437 4966 16393 HBL1_DMSO_200M_050219_2,16405 HBL1_DMSO_200M_050219_2,16405,FIDEQNYIL True True FIDEQNYIL 86.554101 577.790332019329 11178005.0 16393.0 nc|ENSG00000157212|Q6ZW49-1|PAXIP1;;ENST00000464717.5_1_7:154739579-154754102:-|nuORF;;ENSG00000157212|ENST00000404141|PAXIP1;;nc|ENSG00000157212|Q6ZW49-2|PAXIP1;;ENST00000457196.5_1_7:154735861-154782774:-|nuORF 3.4545234044392905 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16406 86.568 800.0 104750.0 25 0 7555.4 + -1 AWIDGVLDM 9 111 1035.4962729141007 0 1035.495532214642 PEAK CID FTMS 0 0 0 16393 166331.53125 1.0 0 0.0 13 ENSG00000165934|ENST00000298875|CPSF2 4 Q{M(Oxidation (M))|F}D{I|L}{I|L}WE 7 -1 19.875 0.0 0.0 0.9606 0.0 0.0 924.454629713164 210.0891207330688 1134.543750446233 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 Q{M(Oxidation (M))|F}D{I|L}{I|L}WE 0.9606 - 5132 + 1 1.091 60858.2 0.7799999713897705 11438 4966 16393 HBL1_DMSO_200M_050219_2,16406 HBL1_DMSO_200M_050219_2,16406, False False AWIDGVLDM 86.567966 1035.49553221464 1959149.25 16393.0 ENSG00000165934|ENST00000298875|CPSF2 4.298537810643514 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16407 86.576 386.0 348000.0 25 0 36258.0 + -1 VQLDPQTVGVIV 12 149 634.3668588529374 1266.7191647726747 2 634.3669921755791 MULTI CID FTMS 0 0 0 16393 158986.421875 0.7905961220030674 -1 0.09381103515625 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MKVHMLVGVLV_ ENSG00000196235|ENST00000432763|SUPT5H;nc|ENSG00000196235|O00267-2|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 22.736283301280096 0.5583477779825423 4 {[QV]|[N{I|L}]|[RA]|[KV]}PTGVEAVGV[{I|L}V] 13 -1 + 89.066 0.0 0.0 7.0312 7.0312 82.733 0.0 0.0 0.0 4.489700043360188 7.513580737957056 4.489700043360188 3.6317790241282495 0 0.5 0.6777807052660807 2.079689690656103 1.329689690656103 {[QV]|[N{I|L}]|[RA]|[KV]}PTGVEAVGV[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}PTREAVGV[{I|L}V];[QP]TVGVEAVGV[{I|L}V];[QP]TVREAVGV[{I|L}V];[VG]APTREAVGV[{I|L}V];[QT]PVGVEAVGV[{I|L}V];{[SA]|[TG]}APVREAVGV[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}PTGVEVAGV[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}PTGVEARV[{I|L}V];[QT]PVREAVGV[{I|L}V] 7.0312;6.7445;6.6768;6.3901;6.384;6.353;6.3201;6.2206;6.0739;6.0663 -;-;-;-;-;-;-;-;-;- 8135 1 1.091 112391.3 1.0 11439 4966 16393 HBL1_DMSO_200M_050219_2,16407 HBL1_DMSO_200M_050219_2,16407,MKVHMLVGVLV False False VQLDPQTVGVIV 86.576072 634.366992175579 1980118.5 16393.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 6.917283693949382 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16408 86.58 212.0 343250.0 25 0 27221.0 + + 19929 FVPPFKGNSV 10 100 546.2771938403027 1090.5398347474054 2 546.2780639529228 MULTI CID FTMS 0 0 0 16393 144977.5625 0.1761633402336257 4 -0.5089263916015625 15 Unmodified _LICCMPWLL_ nc|ENSG00000111554|Q8TC05-4|MDM1;ENSG00000111554|ENST00000682720|MDM1;nc|ENSG00000111554|Q8TC05|MDM1 14.581692164780916 0.4419739649577144 4 [DP]{I|L}P{NN|[MP]|[D{I|L}]|[EV]}PP{NN|[MP]|[D{I|L}]|[EV]} 10 -1 + 37.113 0.0 0.0 3.4032 3.4032 74.626 0.0 0.0 0.0 8.922815857436529 7.269987279362617 7.269987279362617 8.922815857436529 0 0.0 0.9208187539523752 0.0 0.0 [DP]{I|L}P{NN|[MP]|[D{I|L}]|[EV]}PP{NN|[MP]|[D{I|L}]|[EV]};{I|L}{I|L}[YR]{[DS]|[MA]|[CV]|TT}P{NN|[MP]|[D{I|L}]|[EV]};[EP]VP{NN|[MP]|[D{I|L}]|[EV]}PP{NN|[MP]|[D{I|L}]|[EV]};{I|L}{I|L}CC{I|L}[W{I|L}]{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]PP{NN|[MP]|[D{I|L}]|[EV]}[YQ]{I|L};[DP]{I|L}{[TV]|[{I|L}S]}[YR]{NN|[MP]|[D{I|L}]|[EV]} 3.4032;2.585;2.0414;1.668;1.4424;0.80877 -;-;-;-;-;- 110 1 1.091 62621.1 1.0 11440 4966 16393 HBL1_DMSO_200M_050219_2,16408 HBL1_DMSO_200M_050219_2,16408,LICCMPWLL False False FVPPFKGNSV 86.580103 546.278063952923 2230479.5 16393.0 nc|ENSG00000111554|Q8TC05-4|MDM1;;ENSG00000111554|ENST00000682720|MDM1;;nc|ENSG00000111554|Q8TC05|MDM1 1.5351598660151164 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16409 86.594 800.0 184670.0 25 0 18413.0 7552 EIIGNSKNV 9 171 487.26979882348274 972.5250447137656 2 487.7692748904228 MULTI CID FTMS 0 0 0 16393 144086.328125 0.4881694080627802 4 -0.5089263916015625 16 Unmodified _EIIGNSKNV_ ENSG00000197102|ENST00000360184|DYNC1H1 23.1484247019978 0.2366544122328345 4 [VS]WVAD 6 9 36.041 0.0 0.0 3.706 0.0 0.0 0.0 312.1884107628468 312.1884107628468 9.732613556466074 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.1171302707394362 0.0 [VS]WVAD 3.706 - 832 1 1.091 112446.2 0.6399999856948853 11441 4966 16393 HBL1_DMSO_200M_050219_2,16409 HBL1_DMSO_200M_050219_2,16409,EIIGNSKNV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16410 86.596 117.0 436260.0 25 0 46303.0 + 36661 TAYDNFVEL 9 85 536.2533321539821 1070.492111374764 2 536.2539550662041 MULTI CID FTMS 0 0 0 16393 137608.28125 0.2353661591069708 -2 0.145751953125 17 Unmodified _TAYDNFVEL_ ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 37.97399986684836 0.0865783450051559 4 {M(Oxidation (M))|F}N[CS]E{I|L} 6 6 28.505 0.0 0.0 2.6628 0.0 0.0 359.20605994912245 0.0 359.20605994912245 0.0 18.32395805057743 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.7302046884880937 {M(Oxidation (M))|F}N[CS]E{I|L} 2.6628 - 138 + 1 1.091 48364.8 1.0 11442 4966 16393 HBL1_DMSO_200M_050219_2,16410 HBL1_DMSO_200M_050219_2,16410,TAYDNFVEL True True TAYDNFVEL 86.59637 536.253955066204 5322106.5 16393.0 ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 5.7828060785929365 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16411 86.611 800.0 165700.0 25 0 11517.0 + + 19149 ALWDIETGQQTV 12 157 680.8406733008842 1359.6667936685683 2 680.8414184451103 MULTI CID FTMS 0 0 0 16393 141413.578125 1.0 0 0.0 18 Unmodified _LEAREETRELD_ ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000172354|P62879-2|GNB2 37.07464296494664 0.257459615863268 4 [AG]GQTA{I|L}ETGQ 11 -1 75.021 0.0 0.0 5.5176 0.0 0.0 0.0 343.1642051278058 343.1642051278058 22.71627534032588 0.0 0.0 0.0 0 1.048455006504028 1.3010299956639813 1.2544321917401078 0.75 [AG]GQTA{I|L}ETGQ 5.5176 - 28867 1 1.091 99263.2 0.7400000095367432 11443 4966 16393 HBL1_DMSO_200M_050219_2,16411 HBL1_DMSO_200M_050219_2,16411,LEAREETRELD False False ALWDIETGQQTV 86.611376 680.84141844511 1584125.5 16393.0 ENSG00000172354|ENST00000303210|GNB2;;nc|ENSG00000172354|P62879-2|GNB2 7.094486554463704 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16412 86.625 800.0 211500.0 25 0 12298.0 + 246 AAYHPDFPTVL 11 145 615.8135705512784 1229.6125881693567 2 615.8110839724541 MULTI CID FTMS 0 0 0 16393 126294.390625 0.8209656383115626 -1 0.09381103515625 19 Unmodified _AAYHPDFPTVL_ ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6 56.17704186161178 0.0846604386095034 4 [TP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{M(Oxidation (M))|F}PTV{I|L} 11 4 + 57.573 0.0 0.0 4.6822 4.6822 69.551 0.0 0.0 0.0 1.6863077399288429 15.070623213458028 1.6863077399288429 1.6863077399288429 0 0.75 0.958607314841775 1.610924374808178 0.0 [TP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{M(Oxidation (M))|F}PTV{I|L};{[QN]|[E{I|L}]|[KN]}{[CP]|[EA]}PD{M(Oxidation (M))|F}PTV{I|L};{[TV]|[{I|L}S]}M[HA]D{M(Oxidation (M))|F}PTV{I|L};AA{[WN]|[YH]}PD{M(Oxidation (M))|F}PTV{I|L};{[TV]|[{I|L}S]}M[WH]{M(Oxidation (M))|F}PTV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DV]PD{M(Oxidation (M))|F}PTV{I|L};[{I|L}P][EC]PD{M(Oxidation (M))|F}PTV{I|L};[TP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[C(Carbamidomethyl (C))K]APTV{I|L};AAV{I|L}T[C(Carbamidomethyl (C))D]APTV{I|L};{[QG]|[NA]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PD{M(Oxidation (M))|F}PTV{I|L} 4.6822;4.5451;4.3323;4.2086;4.1856;4.1442;4.0916;3.6469;3.6238;3.593 -;-;-;+;-;-;-;-;-;- + 4100 1 1.091 126092.2 0.800000011920929 11444 4966 16393 HBL1_DMSO_200M_050219_2,16412 HBL1_DMSO_200M_050219_2,16412,AAYHPDFPTVL True True AAYHPDFPTVL 86.625207 615.811083972454 1733582.125 16393.0 nc|ENSG00000163029|Q96SB8-2|SMC6;;ENSG00000163029|ENST00000448223|SMC6 7.757066090901692 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16413 86.633 451.0 224380.0 25 0 29379.0 37360 TKPLLWVLLW 10 104 423.5978387550104 1267.7716868652312 3 423.5975829958916 MULTI CID FTMS 0 0 0 16393 119593.421875 0.8087374099347334 -2 0.145751953125 20 Unmodified _TKPLLWVLLW_ ENST00000465984.5_1_2:219247091-219251606:+|nuORF 0.5059551277355931 0.7242961530390927 4 PPK 3 9 13.188 0.0 0.0 1.0402 0.0 0.0 423.32026982281815 519.2349337213499 942.555203544168 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPK 1.0402 - 39 + 1 1.091 85054.4 1.0 11445 4966 16393 HBL1_DMSO_200M_050219_2,16413 HBL1_DMSO_200M_050219_2,16413,TKPLLWVLLW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16415 86.638 3.5 21087000.0 25 0 1935800.0 + 22264 LPRLTPPVL 9 81 503.32679011973016 1004.6390273062603 2 503.3271057009697 MULTI CID FTMS 0 0 0 16414 14667257.0 1.0 0 0.0 1 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 47.74868867922204 0.0453060283459952 4 [{I|L}P][{I|L}T]RPPV{I|L} 9 2 + 56.277 0.0 0.0 5.6017 5.6017 86.722 0.0 0.0 0.0 7.154368285126935 32.07656720587092 7.154368285126935 14.259687322722812 0 0.7742275032520141 0.0 1.1421590589602533 0.0 [{I|L}P][{I|L}T]RPPV{I|L};{I|L}[{I|L}T]PRPPV{I|L};{I|L}{[QN]|[E{I|L}]|[KN]}PKPPV{I|L};[VP]P[R{I|L}]PT{I|L}{I|L};[{I|L}P][{I|L}T]K[HA]{I|L}{I|L};{[HG]|PP}V[R{I|L}]PT{I|L}{I|L} 5.6017;4.1823;4.1823;3.0835;2.149;1.3026 -;-;-;-;-;- 213 1 1.096 59817.9 1.0 11446 4967 16414 HBL1_DMSO_200M_050219_2,16415 HBL1_DMSO_200M_050219_2,16415,LPRLTPPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16416 86.639 23.0 2465200.0 25 0 314590.0 + 42565 VTPPGFQLV 9 78 479.2739339707902 956.5333150083804 2 479.2741882205009 MULTI CID FTMS 0 0 0 16414 2415817.25 0.9641583151176374 -1 0.13995361328125 2 Unmodified _VTPPGFQLV_ ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6 32.30548876998284 0.1201446275138228 4 {[TV]|[{I|L}S]}YY{I|L}S 6 6 37.408 0.0 0.0 3.9108 0.0 0.0 0.0 227.1387895029609 227.1387895029609 21.2101498947667 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[TV]|[{I|L}S]}YY{I|L}S 3.9108 - 211 1 1.096 52742.9 1.0 11447 4967 16414 HBL1_DMSO_200M_050219_2,16416 HBL1_DMSO_200M_050219_2,16416,VTPPGFQLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16417 86.64 11.0 4564700.0 25 0 702450.0 -1 LIDIAADWMT 10 73 582.7854289844591 1163.5563050357182 2 582.7860595583916 MULTI CID FTMS 0 0 0 16414 4135860.5 0.6206772483501074 -1 0.13995361328125 3 Oxidation (M) _LIDIAADWM(Oxidation (M))T_ ENSG00000109572|ENST00000513761|CLCN3;nc|ENSG00000109572|P51790-2|CLCN3;nc|ENSG00000109572|P51790-4|CLCN3;nc|ENSG00000109572|P51790-5|CLCN3 10.073929032068715 0.6785112666868882 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}{I|L}{I|L} 6 -1 40.054 0.0 0.0 3.4424 0.0 0.0 0.0 449.1559264783545 449.1559264783545 14.112365838923608 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9916440611282626 0.3494850021680094 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}{I|L}{I|L} 3.4424 - 97 1 1.096 42250.2 1.0 11448 4967 16414 HBL1_DMSO_200M_050219_2,16417 HBL1_DMSO_200M_050219_2,16417,LIDIAADWMT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16418 86.641 23.0 3117100.0 25 0 505310.0 + 45759 YYISPRLTF 9 64 580.3114262644643 1158.6082995957286 2 580.3117553591728 MULTI CID FTMS 0 0 0 16414 1916206.625 0.6438595909110001 -1 0.13995361328125 4 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 20.41453444215458 0.284085796332423 4 YY{I|L}S 4 5 60.433 0.0 0.0 5.216 0.0 0.0 0.0 629.342109713982 629.342109713982 48.65031366427216 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + YY{I|L}S 5.216 + + 45 + 1 1.096 60506.6 1.0 11449 4967 16414 HBL1_DMSO_200M_050219_2,16418 HBL1_DMSO_200M_050219_2,16418,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16419 86.642 32.0 1511200.0 25 0 228400.0 -1 ALMAAPLSL 9 70 451.75274496202985 901.4909369908596 2 451.7528869509697 MULTI CID FTMS 0 0 0 16414 1659673.375 0.1277908153911673 52 -5.71734619140625 5 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 32.116972079565 0.1225432171549407 4 [{I|L}A]{M(Oxidation (M))|F}PAS 6 -1 48.121 0.0 0.0 5.338 0.0 0.0 0.0 312.19474345390284 312.19474345390284 28.670912423450403 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS 5.338 - 130 1 1.096 42462.2 1.0 11450 4967 16414 HBL1_DMSO_200M_050219_2,16419 HBL1_DMSO_200M_050219_2,16419,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16420 86.644 63.0 1108400.0 25 0 137240.0 + 15719 IQYIPTELDQV 11 74 659.8482513120434 1317.6819496908868 2 659.8488647341728 MULTI CID FTMS 0 0 0 16414 1009764.875 0.1983575850842793 -2 0.2337646484375 6 Unmodified _IQYIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 49.52724829834842 0.1202481389936634 4 [TP]E{I|L}DQ 6 5 36.651 0.0 0.0 2.7815 0.0 0.0 0.0 631.3459234781042 631.3459234781042 6.760108026057331 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.2249073637206092 0.0 + [TP]E{I|L}DQ 2.7815 + + 985 1 1.096 60218.6 1.0 11451 4967 16414 HBL1_DMSO_200M_050219_2,16420 HBL1_DMSO_200M_050219_2,16420,IQYIPTELDQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16421 86.645 47.0 1454300.0 25 0 231780.0 + 19596 LGAARLGLQL 10 95 506.3193455861606 1010.6241382391212 2 506.3190795779228 MULTI CID FTMS 0 0 0 16414 711782.8125 1.0 0 0.0 7 Unmodified _LGAARLGLQL_ REV__ENSG00000148290|ENST00000371974|SURF1;REV__nc|ENSG00000148290|Q15526-2|SURF1 32.30548876998284 0.2428506522065767 4 {[VA]|[{I|L}G]}A{[NV]|[RG]}{I|L}A{I|L}Q{I|L} 10 -1 + 68.288 0.0 0.0 6.7571 6.7571 87.815 0.0 0.0 0.0 11.583624920952502 16.53212513775344 11.583624920952502 9.164539485499256 0 0.6861818737241735 2.0 0.0 0.0 {[VA]|[{I|L}G]}A{[NV]|[RG]}{I|L}A{I|L}Q{I|L};{[VA]|[{I|L}G]}A{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};[Q{I|L}]{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[AG]{I|L}{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[{I|L}A][RN]{I|L}A{I|L}Q{I|L};[Q{I|L}]{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};[AG]{I|L}{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};[{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};[{I|L}A][RN]{I|L}A{I|L}[AG]{I|L} 6.7571;5.8502;5.6109;5.4487;5.3472;4.7008;4.6997;4.5419;4.4403;3.7897 -;-;-;-;-;-;-;-;-;- 311 1 1.096 56981.3 1.0 11452 4967 16414 HBL1_DMSO_200M_050219_2,16421 HBL1_DMSO_200M_050219_2,16421,LGAARLGLQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16422 86.647 86.0 656160.0 25 0 76499.0 + 15431 IPPPVIMV 8 81 433.26449796231606 864.5144429914321 2 433.2645446658134 MULTI CID FTMS 0 0 0 16414 552042.6875 1.0 0 0.0 8 Unmodified _IPPPVIMV_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 41.81723621529253 0.2038889569391319 4 [{I|L}P]VPP{I|L}MV 8 2 + 40.283 0.0 0.0 4.6596 4.6596 68.727 0.0 0.0 0.0 6.368220975871743 7.914478256039672 6.368220975871743 1.249387366082999 0 0.7429928190999391 1.5228787452803376 0.0 0.0 [{I|L}P]VPP{I|L}MV;[{I|L}P]PVP{I|L}MV;[VP]PP{I|L}{I|L}MV;[{I|L}P]PPV{I|L}MV;[{I|L}P]VP{I|L}PMV;[{I|L}P]PV{I|L}PMV;[VP]P{I|L}P{I|L}MV;[VP]{I|L}PP{I|L}MV;{[HG]|PP}VP{I|L}{I|L}MV;[{M(Oxidation (M))|F}T]{I|L}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.6596;4.5151;3.923;3.8858;3.8511;3.7066;3.5748;3.3711;3.3584;3.236 -;-;-;+;-;-;-;-;-;- + 183 1 1.096 49226.7 1.0 11453 4967 16414 HBL1_DMSO_200M_050219_2,16422 HBL1_DMSO_200M_050219_2,16422,IPPPVIMV False True IPPPVIMV 86.647188 433.264544665813 7436293.5 16414.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2 3.5990259647369385 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16423 86.65 111.0 575580.0 25 0 71728.0 + 39543 VAWLVAHV 8 80 447.7638435760572 893.5131342189144 2 447.7637512087822 MULTI CID FTMS 0 0 0 16414 441586.625 0.5614671188567708 1 -0.0745620727539062 9 Unmodified _VAWLVAHV_ ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24 52.33426049586781 0.1282678332820461 4 {[VA]|[{I|L}G]}W{I|L}VAHV 8 0 + 61.679 0.0 0.0 6.903 6.903 93.672 0.0 0.0 0.0 43.26274388132951 8.416375079047498 8.416375079047498 31.925617272171465 0 1.086696871556164 1.6989700043360187 0.0 0.0 + + {[VA]|[{I|L}G]}W{I|L}VAHV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}H[R{I|L}];{[VA]|[{I|L}G]}H{I|L}{[DA]|[EG]}[R{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VH[R{I|L}];[HA]V{I|L}{[DA]|[EG]}[R{I|L}];[HV]A{I|L}{[DA]|[EG]}[R{I|L}] 6.903;3.3299;2.836;2.6817;0.45917;0.21088 +;-;-;-;-;- + 188 + 1 1.096 53529.1 1.0 11454 4967 16414 HBL1_DMSO_200M_050219_2,16423 HBL1_DMSO_200M_050219_2,16423,VAWLVAHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16424 86.652 137.0 439880.0 25 0 89890.0 + 17158 KLIGDPNLEFV 11 67 622.8471497768157 1243.6797466204314 2 622.8482543826103 MULTI CID FTMS 0 0 0 16414 411544.375 0.969811466091814 -1 0.13995361328125 10 Unmodified _KLIGDPNLEFV_ ENSG00000132341|ENST00000543796|RAN;ENST00000444720.1_1_13:21321226-21321529:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 26.020703789607367 0.4812285719068541 4 [NP]{I|L}ERK{I|L}E{M(Oxidation (M))|F}V 10 6 + 69.43 0.0 0.0 5.5826 5.5826 83.2 0.0 0.0 0.0 7.269987279362624 54.73705952196511 7.269987279362624 9.164539485499256 0 0.5 0.0 0.3807196863200844 0.4247425010840047 [NP]{I|L}ERK{I|L}E{M(Oxidation (M))|F}V;[NP]{I|L}E[VG]K{I|L}E{M(Oxidation (M))|F}V;[NP]{I|L}[DG]{I|L}K{I|L}E{M(Oxidation (M))|F}V;[NP][DG]{I|L}{I|L}K{I|L}E{M(Oxidation (M))|F}V;[NP]{I|L}ERE[K{I|L}]{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[NP]RK{I|L}E{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}RK[NP]{I|L}E{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}T][{M(Oxidation (M))|F}T]{I|L}K{I|L}E{M(Oxidation (M))|F}V;[NP]{I|L}E[DG]{I|L}[K{I|L}]{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}R[NP]K{I|L}E{M(Oxidation (M))|F}V 5.5826;4.8457;4.3616;3.978;3.9333;3.9333;3.6375;3.5908;3.5801;3.2538 -;-;-;-;-;-;-;-;-;- 471 1 1.096 54297.4 1.0 11455 4967 16414 HBL1_DMSO_200M_050219_2,16424 HBL1_DMSO_200M_050219_2,16424,KLIGDPNLEFV False True KLIGDPNLEFV 86.652296 622.84825438261 3510069.75 16414.0 ENST00000455094.1_1_6:30454046-30454364:+|nuORF;;ENST00000444720.1_1_13:21321226-21321529:-|nuORF;;ENSG00000132341|ENST00000543796|RAN 7.326560974121094 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16425 86.656 183.0 392690.0 25 0 33041.0 + 1720 ALPPVLTTV 9 89 455.7843962588707 909.5542395845414 2 455.7846252322197 MULTI CID FTMS 0 0 0 16414 405993.75 0.8105034681498177 1 -0.0745620727539062 11 Unmodified _ALPPVLTTV_ ENSG00000155506|ENST00000518297|LARP1 32.116972079565 0.1225432171549407 4 [{I|L}A][HV]PVP 7 6 30.278 0.0 0.0 3.3289 0.0 0.0 0.0 193.0988253229125 193.0988253229125 11.834391281944647 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}A][HV]PVP 3.3289 - 278 + 1 1.096 59115.9 1.0 11456 4967 16414 HBL1_DMSO_200M_050219_2,16425 HBL1_DMSO_200M_050219_2,16425,ALPPVLTTV True True ALPPVLTTV 86.655838 455.78462523222 8695317.0 16414.0 ENSG00000155506|ENST00000518297|LARP1 1.707329551378886 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16426 86.658 124.0 429120.0 25 0 60577.0 + 34837 SQFQQEFPSL 10 80 605.79119129381 1209.56782965442 2 605.7910644412041 MULTI CID FTMS 0 0 0 16414 360920.28125 0.0973601561586414 -2 0.2337646484375 12 Unmodified _SQFQQEFPSL_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 74.19965305603844 0.0188013450058842 4 {[QS]|[NT]}{M(Oxidation (M))|F}QQE{M(Oxidation (M))|F} 7 3 41.985 0.0 0.0 3.4711 0.0 0.0 0.0 312.1467230472512 312.1467230472512 10.524604605747037 0.0 0.0 0.0 0 0.5 0.0 0.6549471895720985 1.1307196863200843 + {[QS]|[NT]}{M(Oxidation (M))|F}QQE{M(Oxidation (M))|F} 3.4711 + + 902 1 1.096 45668.4 1.0 11457 4967 16414 HBL1_DMSO_200M_050219_2,16426 HBL1_DMSO_200M_050219_2,16426,SQFQQEFPSL True True SQFQQEFPSL 86.658405 605.791064441204 118448724.0 16414.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 7.406705856323242 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16427 86.661 154.0 516700.0 25 0 66826.0 + 8862 FAAPEKDIFL 10 99 575.8114284044186 1149.6083038756371 2 575.8116332888603 MULTI CID FTMS 0 0 0 16414 364320.875 0.862773666988713 -1 0.13995361328125 13 Unmodified _FAAPEKDIFL_ ENSG00000183826|ENST00000481247|BTBD9;nc|ENSG00000183826|Q96Q07-2|BTBD9;nc|ENSG00000183826|Q96Q07-3|BTBD9 36.506200033944 0.1944608063770638 4 [EP]KD{I|L}{M(Oxidation (M))|F}AA{M(Oxidation (M))|F}{I|L} 10 6 + 63.955 0.0 0.0 5.5632 5.5632 80.619 0.0 0.0 0.0 13.80485524684586 8.507112333562858 8.507112333562858 6.505149978319906 0 0.7742275032520141 0.7958800173440752 1.0629529932484498 0.0 [EP]KD{I|L}{M(Oxidation (M))|F}AA{M(Oxidation (M))|F}{I|L};[EP]KD{I|L}A{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L};[EP]KDA{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L};[EP]KD{M(Oxidation (M))|F}{I|L}AA{M(Oxidation (M))|F}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[HN]{I|L}{M(Oxidation (M))|F}AA{M(Oxidation (M))|F}{I|L};[EP]KD{I|L}AA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[EP]KDA{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}A[RH]{M(Oxidation (M))|F}AA{M(Oxidation (M))|F}{I|L};[EP]KAD{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}[PG]D{I|L}{M(Oxidation (M))|F}AA{M(Oxidation (M))|F}{I|L} 5.5632;4.9974;4.9135;4.8863;4.3624;4.3205;4.2366;4.166;4.1329;3.9901 -;-;-;-;-;-;-;-;-;- 1160 1 1.096 64722.6 1.0 11458 4967 16414 HBL1_DMSO_200M_050219_2,16427 HBL1_DMSO_200M_050219_2,16427,FAAPEKDIFL False True FAAPEKDIFL 86.661473 575.81163328886 3566503.0 16414.0 ENSG00000183826|ENST00000481247|BTBD9;;nc|ENSG00000183826|Q96Q07-2|BTBD9;;nc|ENSG00000183826|Q96Q07-3|BTBD9 3.7493762175242105 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16428 86.666 229.0 588780.0 25 0 118420.0 + 13209 HGLTVPLI 8 92 425.263333665381 848.5121143975621 2 425.2634765505791 MULTI CID FTMS 0 0 0 16414 373925.15625 0.1419336489648394 -2 0.2337646484375 14 Unmodified _HGLTVPLI_ ENSG00000113732|ENST00000519374|ATP6V0E1 63.393752934501535 0.1160198504584336 4 {[HG]|PP}{I|L}TVP{I|L}{I|L} 8 0 + 39.051 0.0 0.0 4.6023 4.6023 73.982 0.0 0.0 0.0 4.259687322722812 8.798242325111438 4.259687322722812 4.259687322722812 0 1.1237125054200234 0.0 1.274227503252014 0.0 + + {[HG]|PP}{I|L}TVP{I|L}{I|L};[HV]ATVP{I|L}{I|L};{[HG]|PP}{I|L}S{I|L}P{I|L}{I|L};[HV]AS{I|L}P{I|L}{I|L};{[HG]|PP}{I|L}[{I|L}P]S{I|L}{I|L};[HV]A[{I|L}P]S{I|L}{I|L} 4.6023;4.1003;3.7801;3.2781;0.89078;0.38876 +;-;-;-;-;- + 252 1 1.096 109022.0 1.0 11459 4967 16414 HBL1_DMSO_200M_050219_2,16428 HBL1_DMSO_200M_050219_2,16428,HGLTVPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16429 86.669 165.0 493310.0 25 0 45302.0 + 44335 YLPPGFLSA 9 107 482.76040439193247 963.506255850665 2 482.7606689333916 MULTI CID FTMS 0 0 0 16414 331396.84375 0.6251461368468113 4 -0.4147491455078125 15 Unmodified _YLPPGFLSA_ ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-4|SREBF1 67.03532852164291 0.0222449892513529 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{I|L}Y{I|L}{[SA]|[TG]} 9 4 + 37.342 0.0 0.0 3.8756 3.8756 65.259 0.0 0.0 0.0 5.073930987251394 2.80902815397355 2.80902815397355 0.932204275119254 0 0.5 1.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{I|L}Y{I|L}{[SA]|[TG]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{I|L}SAY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{I|L}PY{I|L}{[SA]|[TG]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{I|L}PSAY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GPY{I|L}{I|L}{[SA]|[TG]};[PG]{M(Oxidation (M))|F}P{I|L}Y{I|L}{[SA]|[TG]};[PG]{M(Oxidation (M))|F}P{I|L}SAY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{[SA]|[TG]};[{I|L}A]W{I|L}DAY{I|L};[Y{I|L}][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}Y{I|L} 3.8756;3.7789;3.3804;3.2837;2.8852;2.6451;2.5483;2.39;2.3321;2.2585 -;-;-;-;-;-;-;-;-;- 613 1 1.096 68719.3 1.0 11460 4967 16414 HBL1_DMSO_200M_050219_2,16429 HBL1_DMSO_200M_050219_2,16429,YLPPGFLSA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16430 86.671 83.0 725190.0 25 0 81153.0 + 22966 LSFPSGLAVV 10 79 495.2875115291887 988.5604701251774 2 495.2862426638603 MULTI CID FTMS 0 0 0 16414 305654.78125 0.4655842522569592 -2 0.2337646484375 16 Unmodified _LSFPSGLAVV_ REV__ENSG00000169495|ENST00000302495|HTRA4 19.256988751693697 0.5244284437930726 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{I|L}PN 8 -1 41.082 0.0 0.0 4.1557 0.0 0.0 0.0 68.05134760074452 68.05134760074452 27.98311797432703 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.1595680409956017 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{I|L}PN 4.1557 - 108 + 1 1.096 52924.8 1.0 11461 4967 16414 HBL1_DMSO_200M_050219_2,16430 HBL1_DMSO_200M_050219_2,16430,LSFPSGLAVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16431 86.675 212.0 358030.0 25 0 47745.0 + 1710 ALPLSEGTH 9 85 462.744003502894 0 462.7440063357353 PEAK CID FTMS 0 0 0 16414 227134.65625 0.0867493267784121 26 -2.852996826171875 17 Unmodified _ALPLSEGTH_ REV__ENSG00000121904|ENST00000373381|CSMD2;REV__nc|ENSG00000121904|Q7Z408-2|CSMD2;REV__nc|ENSG00000121904|Q7Z408|CSMD2 21.74664581756881 0.185237546287679 4 P{I|L} 2 -1 13.271 0.0 0.0 1.4371 0.0 0.0 184.12093593042115 526.1923922174436 710.3133281478647 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 P{I|L} 1.4371 + + 35 + 1 1.096 63306.8 1.0 11462 4967 16414 HBL1_DMSO_200M_050219_2,16431 HBL1_DMSO_200M_050219_2,16431,ALPLSEGTH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16432 86.68 282.0 452020.0 25 0 37114.0 + 31508 RQFSTPFQL 9 114 562.2987712430881 1122.5829895529762 2 562.2987548708916 MULTI CID FTMS 0 0 0 16414 197134.671875 0.4111068678784427 -2 0.2337646484375 18 Unmodified _RQFSTPFQL_ ENSG00000143442|ENST00000271715|POGZ;nc|ENSG00000143442|Q7Z3K3-2|POGZ;nc|ENSG00000143442|Q7Z3K3-3|POGZ;nc|ENSG00000143442|Q7Z3K3-5|POGZ;nc|ENSG00000143442|Q7Z3K3-6|POGZ;nc|ENSG00000143442|Q7Z3K3-7|POGZ 38.17557092003332 0.0854718145212029 4 [AG]{M(Oxidation (M))|F}RST{I|L}MQ{I|L} 10 5 + 52.365 0.0 0.0 4.6647 4.6647 76.544 0.0 0.0 0.0 7.289332277134619 15.766503515519126 7.289332277134619 6.197887582883936 0 1.1936726795685342 1.5228787452803376 0.3807196863200844 0.0 [AG]{M(Oxidation (M))|F}RST{I|L}MQ{I|L};[AG]{I|L}[YN]T{I|L}MQ{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RST{I|L}MQ{I|L};{[VA]|[{I|L}G]}A[YN]T{I|L}MQ{I|L};[AG]{M(Oxidation (M))|F}RST{I|L}M[AG]{I|L};[YV]QQT{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L};{[CT]|[{M(Oxidation (M))|F}G]}ARST{I|L}MQ{I|L};[Q{I|L}][YN]T{I|L}MQ{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[NS]T{I|L}MQ{I|L};{[TV]|[{I|L}S]}[KC]ST{I|L}MQ{I|L} 4.6647;4.1126;4.0153;4.0013;3.8483;3.8475;3.7064;3.6142;3.5762;3.4178 -;-;-;-;-;-;-;-;-;- 2585 1 1.096 103118.3 1.0 11463 4967 16414 HBL1_DMSO_200M_050219_2,16432 HBL1_DMSO_200M_050219_2,16432,RQFSTPFQL True True RQFSTPFQL 86.6801 562.298754870892 3827047.75 16414.0 nc|ENSG00000143442|Q7Z3K3-6|POGZ;;nc|ENSG00000143442|Q7Z3K3-3|POGZ;;nc|ENSG00000143442|Q7Z3K3-5|POGZ;;nc|ENSG00000143442|Q7Z3K3-2|POGZ;;nc|ENSG00000143442|Q7Z3K3-7|POGZ;;ENSG00000143442|ENST00000271715|POGZ 5.180637677510579 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16433 86.694 800.0 192040.0 25 0 68373.0 -1 0 112 1010.8120225752366 3029.414238325909 3 1011.147448718548 MULTI CID FTMS 0 0 0 16414 198686.53125 0.2178353922498599 2 -0.21160888671875 19 4 [MN][YG]H 5 -1 35.285 0.0 0.0 1.1648 0.0 0.0 0.0 2424.124910737777 2424.124910737777 13.066884185923657 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 [MN][YG]H 1.1648 - 955 + 1 1.096 104997.3 0.8600000143051147 11464 4967 16414 HBL1_DMSO_200M_050219_2,16433 HBL1_DMSO_200M_050219_2,16433, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16434 86.708 800.0 430980.0 25 0 60099.0 + 38934 TVLTQEAIITV 11 184 594.3480657398883 1186.6815785465765 2 594.3490478396416 MULTI CID FTMS 0 0 0 16414 159799.953125 0.5911163404598077 1 -0.0745620727539062 20 Unmodified _TVLTQEAIITV_ ENSG00000101166|ENST00000355937|PRELID3B;ENSG00000141391|ENST00000440960|PRELID3A;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B;nc|ENSG00000141391|Q96N28-2|PRELID3A 24.99096001346401 0.505407273373304 4 CEEKG[{I|L}P]T{M(Oxidation (M))|F} 9 9 57.199 0.0 0.0 4.8201 0.0 0.0 164.16870576863658 0.0 164.16870576863658 0.0 20.877866482281632 0.0 0.0 0 0.0 0.0 2.462602858053064 0.0 CEEKG[{I|L}P]T{M(Oxidation (M))|F} 4.8201 - 12903 + 1 1.096 250169.4 0.8100000023841858 11465 4967 16414 HBL1_DMSO_200M_050219_2,16434 HBL1_DMSO_200M_050219_2,16434,TVLTQEAIITV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16436 86.712 4.6 13499000.0 25 0 1257800.0 + 29591 QLVDIIEKV 9 78 528.8192103613729 0 528.8191406130791 PEAK CID FTMS 0 0 0 16435 11501500.0 1.0 0 0.0 1 Unmodified _QLVDIIEKV_ ENSG00000131467|ENST00000590720|PSME3;ENST00000593111.1_1_17:40986588-40991030:+|nuORF;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3 53.40400417844725 0.023745606374537 4 VD{I|L}{I|L}EK 6 3 38.726 0.0 0.0 3.6685 0.0 0.0 241.14322570583167 114.05624567203358 355.19947137786534 0.0 0.0 0.0 0.0 0 1.048455006504028 0.0 0.3807196863200844 0.0 + VD{I|L}{I|L}EK 3.6685 + + 103 + 1 1.096 53526.5 1.0 11466 4968 16435 HBL1_DMSO_200M_050219_2,16436 HBL1_DMSO_200M_050219_2,16436,QLVDIIEKV True True QLVDIIEKV 86.712298 528.819140613079 246185568.0 16435.0 ENST00000593111.1_1_17:40986588-40991030:+|nuORF;;ENSG00000131467|ENST00000590720|PSME3;;nc|ENSG00000131467|P61289-2|PSME3;;nc|ENSG00000131467|P61289-3|PSME3 5.911000887552897 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16437 86.713 13.0 3911900.0 25 0 745390.0 + 11566 GIYTGFIKV 9 60 499.2902375562403 996.5659221792806 2 499.2902099490166 MULTI CID FTMS 0 0 0 16435 3848095.25 0.9163597723254768 1 -0.1370468139648437 2 Unmodified _GIYTGFIKV_ ENSG00000153179|ENST00000542104|RASSF3 18.1463463914782 0.3454829746528889 4 {[VA]|[{I|L}G]}YT 4 5 39.693 0.0 0.0 3.983 0.0 0.0 0.0 559.3261335244432 559.3261335244432 20.0 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {[VA]|[{I|L}G]}YT 3.983 + + 52 + 1 1.096 45771.6 1.0 11467 4968 16435 HBL1_DMSO_200M_050219_2,16437 HBL1_DMSO_200M_050219_2,16437,GIYTGFIKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16438 86.716 104.0 635570.0 25 0 102560.0 + 36270 SYFEKGPLTF 10 87 594.8005816308975 1187.5866103285948 2 594.8002807497978 MULTI CID FTMS 0 0 0 16435 497020.40625 0.4979647653046023 -1 0.0745620727539062 3 Unmodified _SYFEKGPLTF_ ENSG00000172687|ENST00000683779|ZNF738;ENSG00000197020|ENST00000358296|ZNF100;nc|ENSG00000172687|Q8NE65-2|ZNF738 74.19965305603844 0.0188013450058842 4 {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}EKG[{I|L}P]T{M(Oxidation (M))|F} 10 0 + 64.268 0.0 0.0 5.4116 5.4116 86.169 0.0 0.0 0.0 7.152478964635506 15.026975159433531 7.152478964635506 15.47274004902107 0 1.5356668758921828 0.0 1.8556270500406933 0.0 + + {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}EKG[{I|L}P]T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[Y{I|L}]GKE{M(Oxidation (M))|F}[MT];{[TV]|[{I|L}S]}[Y{I|L}]GKEMT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{I|L}GKEMT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}[WK][{I|L}P]T{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}HKKMT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{I|L}GKE{M(Oxidation (M))|F}[MT];[{I|L}T][YV]GKE{M(Oxidation (M))|F}[MT];{[TV]|[{I|L}S]}[PA]K{M(Oxidation (M))|F}{M(Oxidation (M))|F}E{[{M(Oxidation (M))|F}C]|[YS]};[{I|L}T][YV]GKEMT{M(Oxidation (M))|F} 5.4116;4.1087;3.8397;3.7286;3.4794;3.3865;3.256;3.1014;2.9016;2.8324 +;-;-;-;-;-;-;-;-;- + 1083 + 1 1.096 54390.3 1.0 11468 4968 16435 HBL1_DMSO_200M_050219_2,16438 HBL1_DMSO_200M_050219_2,16438,SYFEKGPLTF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16439 86.718 93.0 425410.0 25 0 83215.0 + 17499 KPGRRWPRKA 10 41 417.9223178514591 1250.7451241545773 3 417.9220764040947 MULTI CID FTMS 0 0 0 16435 497871.3125 0.8220875274796607 1 -0.1370468139648437 4 Unmodified _KPGRRWPRKA_ REV__ENSG00000167791|ENST00000294288|CABP2;REV__nc|ENSG00000167791|Q9NPB3-2|CABP2 0.4007161486938917 0.7247829448918255 4 P 1 -1 1.1092 0.0 0.0 0.088687 0.0 0.0 1030.6134846055522 120.05077539615468 1150.664260001707 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.088687 + + 2 + 1 1.096 37227.6 1.0 11469 4968 16435 HBL1_DMSO_200M_050219_2,16439 HBL1_DMSO_200M_050219_2,16439,KPGRRWPRKA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16440 86.727 551.0 295550.0 25 0 13348.0 -1 0 139 1029.831039667116 3086.471289601548 3 1030.165209949017 MULTI CID FTMS 0 0 0 16435 473869.15625 0.2020935491967122 2 -0.2944107055664062 5 4 MNMVNAS 7 -1 90.961 0.0 0.0 2.9471 0.0 0.0 0.0 2336.079511807057 2336.079511807057 50.85757279536253 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7742275032520141 0.8494850021680094 MNMVNAS 2.9471 - 27786 + 1 1.096 107052.0 1.0 11470 4968 16435 HBL1_DMSO_200M_050219_2,16440 HBL1_DMSO_200M_050219_2,16440, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16441 86.729 50.0 937470.0 25 0 143760.0 + 13264 HILDFSPSL 9 82 514.7736301395796 1027.5327073459591 2 514.7752563357353 MULTI CID FTMS 0 0 0 16435 609212.3125 0.7936941059599952 -1 0.0745620727539062 6 Unmodified _HILDFSPSL_ ENSG00000124702|ENST00000326974|KLHDC3 42.09456458481378 0.0639583784996157 4 S{M(Oxidation (M))|F}YPS{I|L} 6 5 42.626 0.0 0.0 4.1484 0.0 0.0 315.1763549292761 0.0 315.1763549292761 0.0 24.13979329422069 0.0 0.0 0 0.0 0.0 0.75 0.0 S{M(Oxidation (M))|F}YPS{I|L} 4.1484 - 185 + 1 1.096 47456.7 1.0 11471 4968 16435 HBL1_DMSO_200M_050219_2,16441 HBL1_DMSO_200M_050219_2,16441,HILDFSPSL True True HILDFSPSL 86.728767 514.775256335735 5675821.0 16435.0 ENSG00000124702|ENST00000326974|KLHDC3 6.140156904856364 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16442 86.73 64.0 1031800.0 25 0 92178.0 + 12923 GYPEVALHF 9 84 516.7609705695876 1031.507388205975 2 516.7601806521416 MULTI CID FTMS 0 0 0 16435 471603.4375 0.3913327298671472 2 -0.2944107055664062 7 Unmodified _GYPEVALHF_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 29.081581746732265 0.1611639662936252 4 [YG]PEVA{I|L}H{M(Oxidation (M))|F} 9 0 + 60.829 0.0 0.0 5.8971 5.8971 77.762 0.0 0.0 0.0 9.208187539523747 3.187587626244124 3.187587626244124 3.187587626244124 0 0.2742275032520141 2.0 0.3807196863200844 0.0 + + [YG]PEVA{I|L}H{M(Oxidation (M))|F};[YG]PEVKW[PG];[MN]{I|L}KVEP{[DS]|[MA]|[CV]|TT};[YG]PEVA{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};[YG][YV]E[RV]{M(Oxidation (M))|F};[H{I|L}][HV]VEP{[DS]|[MA]|[CV]|TT} 5.8971;5.5881;5.0045;4.3953;1.633;1.5762 +;-;-;-;-;- + 201 + 1 1.096 58755.0 1.0 11472 4968 16435 HBL1_DMSO_200M_050219_2,16442 HBL1_DMSO_200M_050219_2,16442,GYPEVALHF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16443 86.735 230.0 411790.0 25 0 83737.0 + 19379 LERKVKHLTQ 10 71 626.3800149034347 1250.7454768736693 2 626.3799926638603 MULTI CID FTMS 0 0 0 16435 458913.9375 0.8469723882975465 1 -0.1370468139648437 8 Unmodified _LERKVKHLTQ_ REV__ENSG00000258890|ENST00000556440|CEP95;REV__ENST00000553956.6_1_17:62527116-62533894:+|nuORF;REV__nc|ENSG00000258890|Q96GE4-2|CEP95 3.2813086475875832 0.7114585191678878 4 {I|L} 1 -1 9.5329 0.0 0.0 0.76218 0.0 0.0 1119.6505041947614 0.0 1119.6505041947614 0.0 6.038041552508728 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.76218 + + 7 + 1 1.096 75159.1 1.0 11473 4968 16435 HBL1_DMSO_200M_050219_2,16443 HBL1_DMSO_200M_050219_2,16443,LERKVKHLTQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16444 86.74 296.0 363070.0 25 0 23200.0 -1 FGSKMMPMFL 10 136 602.7818489997615 1203.5491450663228 2 602.7820922732353 MULTI CID FTMS 0 0 0 16435 257558.03125 0.5093623058926368 -1 0.0745620727539062 9 Oxidation (M) _FGSKM(Oxidation (M))MPMFL_ ENSG00000143514|ENST00000343537|TP53BP2;ENST00000472180.1_1_1:224001936-224033382:-|nuORF 20.41453444215458 0.5050059513928961 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHYP{I|L}M{M(Oxidation (M))|F} 9 -1 + 76.353 0.0 0.0 6.344 6.344 76.762 0.0 0.0 0.0 16.53212513775344 14.973024840566469 14.973024840566469 1.7731749024395782 0 0.3807196863200844 2.0 1.048455006504028 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHYP{I|L}M{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHYPM{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HH{I|L}{M(Oxidation (M))|F}{I|L}M{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[KG]A{M(Oxidation (M))|F}{I|L}M{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHY{I|L}PM{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HH{M(Oxidation (M))|F}{I|L}{I|L}M{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HH{I|L}{M(Oxidation (M))|F}M{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M[KG]A{M(Oxidation (M))|F}M{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HHY{I|L}D{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HH{M(Oxidation (M))|F}{I|L}M{I|L}{M(Oxidation (M))|F} 6.344;6.1967;5.8035;5.7475;5.6572;5.6572;5.6562;5.6002;5.5099;5.5099 -;-;-;-;-;-;-;-;-;- 3433 1 1.096 78910.3 1.0 11474 4968 16435 HBL1_DMSO_200M_050219_2,16444 HBL1_DMSO_200M_050219_2,16444,FGSKMMPMFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16445 86.746 323.0 165310.0 25 0 15296.0 + 37768 TLRSEGGTL 9 105 467.2557031428642 932.4968533525284 2 467.2552978396416 MULTI CID FTMS 0 0 0 16435 258282.09375 0.863928966769418 -5 0.4205474853515625 10 Unmodified _TLRSEGGTL_ REV__ENSG00000205978|ENST00000382554|NYNRIN 15.847184025352805 0.4077185912009129 4 T{I|L} 2 -1 20.846 0.0 0.0 2.2355 0.0 0.0 700.354105405066 0.0 700.354105405066 0.0 11.75527301312897 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 T{I|L} 2.2355 + + 46 + 1 1.096 49033.5 1.0 11475 4968 16435 HBL1_DMSO_200M_050219_2,16445 HBL1_DMSO_200M_050219_2,16445,TLRSEGGTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16446 86.754 439.0 335560.0 25 0 45013.0 + 30681 GVFPLRGKILNV 12 145 438.2745572325306 1311.8018422977918 3 438.2745849490166 MULTI CID FTMS 0 0 0 16435 244072.6875 0.94296688948008 -1 0.0745620727539062 11 Unmodified _RFPIRLEGLVL_ nc|ENSG00000131747|P11388-4|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;ENSG00000077097|ENST00000264331|TOP2B 19.361941925380144 0.6323962752489956 4 [VG]{M(Oxidation (M))|F}[KC]{I|L} 6 10 41.043 0.0 0.0 3.1288 0.0 0.0 0.0 661.4162081354124 661.4162081354124 23.620280792130544 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.805462187404089 [VG]{M(Oxidation (M))|F}[KC]{I|L} 3.1288 - 376 + 1 1.096 118914.4 1.0 11476 4968 16435 HBL1_DMSO_200M_050219_2,16446 HBL1_DMSO_200M_050219_2,16446,RFPIRLEGLVL False False GVFPLRGKILNV 86.753771 438.274584949017 9382453.0 16435.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;nc|ENSG00000131747|P11388-2|TOP2A;;ENSG00000077097|ENST00000264331|TOP2B 4.711625417073567 3.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16447 86.762 491.0 541700.0 25 0 41314.0 + + 14875 KVLGALVEL 9 173 471.30551385675335 940.5964747803068 2 471.3053466677666 MULTI CID FTMS 0 0 0 16435 211007.0 0.602530096281151 -1 0.0745620727539062 12 Unmodified _ILKNVIEI_ nc|ENSG00000119508|Q92570-3|NR4A3;ENSG00000119508|ENST00000395097|NR4A3 36.04419817259434 0.3004715606373109 4 {I|L}{I|L}N{I|L}KVE{I|L} 8 -1 + 54.792 0.0 0.0 5.8252 5.8252 56.012 0.0 0.0 0.0 6.409780573583319 14.024174299985006 6.409780573583319 0.0 0 0.6989700043360187 1.3979400086720375 0.0 0.0 {I|L}{I|L}N{I|L}KVE{I|L};{I|L}{I|L}NK{I|L}VE{I|L};{I|L}{I|L}QVKVE{I|L};{I|L}{I|L}NKV{I|L}E{I|L};[{I|L}A]GVK{I|L}VE{I|L};[{I|L}A]GV{I|L}KVE{I|L};[{I|L}V]Q{I|L}KVE{I|L};[{I|L}V]QK{I|L}VE{I|L};{I|L}{I|L}GGK{I|L}VE{I|L};{I|L}{I|L}GG{I|L}KVE{I|L} 5.8252;5.8252;5.5052;5.1851;5.1437;5.1437;5.0109;5.0109;4.8405;4.8405 -;-;-;-;-;-;-;-;-;- 1159 1 1.096 204040.3 1.0 11477 4968 16435 HBL1_DMSO_200M_050219_2,16447 HBL1_DMSO_200M_050219_2,16447,ILKNVIEI False False KVLGALVEL 86.762439 471.305346667767 2719422.0 16435.0 nc|ENSG00000119508|Q92570-3|NR4A3;;ENSG00000119508|ENST00000395097|NR4A3 2.7033591270446777 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16448 86.776 800.0 162200.0 25 0 5368.8 -1 0 118 796.7053753993331 2387.094296798199 3 797.0419799685478 MULTI CID FTMS 0 0 0 16435 139797.875 0.9830133389791832 -4 0.3602676391601562 13 4 [YK]YMR{I|L}{I|L}{I|L} 8 -1 48.339 0.0 0.0 2.025 0.0 0.0 0.0 1303.4697600152492 1303.4697600152492 22.80053682550154 0.0 0.0 0.0 0 0.9247425010840048 1.3010299956639813 0.0 0.3252574989159953 [YK]YMR{I|L}{I|L}{I|L} 2.025 - 5705 1 1.096 96982.9 0.7900000214576721 11478 4968 16435 HBL1_DMSO_200M_050219_2,16448 HBL1_DMSO_200M_050219_2,16448, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16449 86.785 506.0 380470.0 25 0 107150.0 + 34572 SPGRGLAF 8 129 402.7208609063859 803.4271688795718 2 402.7205078005791 MULTI CID FTMS 0 0 0 16435 131560.359375 0.4443590133042831 -1 0.0745620727539062 14 Unmodified _SPGRGLAF_ REV__ENSG00000004777|ENST00000007510|ARHGAP33;REV__nc|ENSG00000004777|O14559-10|ARHGAP33;REV__nc|ENSG00000004777|O14559-11|ARHGAP33 5.760428011301431 0.7893668129297577 4 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 1.5526 0.0 0.0 638.3476075776172 0.0 638.3476075776172 0.0 5.568109453757657 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.5526 + + 24 + 1 1.096 153155.2 1.0 11479 4968 16435 HBL1_DMSO_200M_050219_2,16449 HBL1_DMSO_200M_050219_2,16449,SPGRGLAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16450 86.793 372.0 228740.0 25 0 26571.0 -1 0 98 1021.9539895286468 2041.8934261240936 2 1021.954943835735 MULTI CID FTMS 0 0 0 16435 123082.109375 0.4240349573933218 -1 0.0745620727539062 15 4 A{I|L}D{I|L}Q{[QC]|[C(Carbamidomethyl (C))A]}TMVSQ 12 -1 60.039 0.0 0.0 2.9404 0.0 0.0 706.2947240561899 0.0 706.2947240561899 0.0 32.57618925608522 0.0 0.0 0 0.5 0.0 0.9802046884880936 0.4247425010840047 A{I|L}D{I|L}Q{[QC]|[C(Carbamidomethyl (C))A]}TMVSQ 2.9404 - 5584 + 1 1.096 63273.7 1.0 11480 4968 16435 HBL1_DMSO_200M_050219_2,16450 HBL1_DMSO_200M_050219_2,16450, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16451 86.807 800.0 152570.0 25 0 25479.0 + 43352 WPAPAVSL 8 137 420.73445722342944 839.4543615136589 2 420.7342712283134 MULTI CID FTMS 0 0 0 16435 116909.4140625 0.0662777376606452 7 -0.8639755249023438 16 Unmodified _WPAPAVSL_ REV__ENST00000414084.1_1_3:178785539-178789305:-|nuORF;REV__ENST00000432729.5_1_3:178785539-178789470:-|nuORF 36.46614268402704 0.2934124525509074 4 [WP]G[PA]{I|L}S{I|L} 8 -1 + 42.317 0.0 0.0 5.041 5.041 76.47 0.0 0.0 0.0 12.140012553530966 25.061668675368622 12.140012553530966 4.771212547196626 0 0.8494850021680094 1.0457574905606752 0.0 0.0 [WP]G[PA]{I|L}S{I|L};[WP]G{I|L}[PA]S{I|L};[WP][QP]{I|L}S{I|L};[PG]W[PA]{I|L}S{I|L};[AG]P[WP]{I|L}S{I|L};[QP][WP]{I|L}S{I|L};[PG]W{I|L}[PA]S{I|L};{[TV]|[{I|L}S]}[PA][PG]W{I|L};[PG]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}S{I|L};[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]}[PA]S{I|L} 5.041;4.4727;4.2775;3.0172;2.6163;2.6122;2.4488;2.3957;2.2999;2.2536 -;-;-;-;-;-;-;-;-;- 300 1 1.096 97736.8 0.5400000214576721 11481 4968 16435 HBL1_DMSO_200M_050219_2,16451 HBL1_DMSO_200M_050219_2,16451,WPAPAVSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16452 86.811 191.0 519510.0 25 0 112540.0 -1 0 83 399.7235490430389 797.4325451528779 2 399.7232543826103 MULTI CID FTMS 0 0 0 16435 107456.6015625 0.1416224048333172 -2 0.2145156860351562 17 4 {[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}{I|L}K 6 -1 + 57.144 0.0 0.0 7.166 7.166 77.267 0.0 0.0 0.0 22.47863406197992 0.5799194697768684 0.5799194697768684 0.5799194697768684 0 0.7302046884880937 2.0 0.0 0.2887254899964357 {[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}{I|L}K;{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}K{I|L};[K{I|L}]{M(Oxidation (M))|F}{I|L}{[YD]|[{M(Oxidation (M))|F}M]} 7.166;7.0933;0.99129 -;-;- 56 + 1 1.096 81713.2 1.0 11482 4968 16435 HBL1_DMSO_200M_050219_2,16452 HBL1_DMSO_200M_050219_2,16452, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16453 86.825 800.0 270150.0 25 0 39764.0 + -1 NALPPVLTTV 10 157 1023.8285018901192 3068.463676270557 3 1024.162158191204 MULTI CID FTMS 0 0 0 16435 97100.9609375 0.357731909803452 -1 0.0745620727539062 18 ENSG00000155506|ENST00000518297|LARP1 4 [MN]MV{I|L}NP 7 -1 56.872 0.0 0.0 1.8534 0.0 0.0 0.0 2266.0183384526285 2266.0183384526285 31.55410404594221 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.7614393726401688 [MN]MV{I|L}NP 1.8534 - 7326 + 1 1.096 140002.5 0.7300000190734863 11483 4968 16435 HBL1_DMSO_200M_050219_2,16453 HBL1_DMSO_200M_050219_2,16453, False False NALPPVLTTV 86.824754 1024.1621581912 336026.53125 16435.0 ENSG00000155506|ENST00000518297|LARP1 5.80657958984375 1.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16454 86.84 800.0 114590.0 25 0 6170.7 21740 LPMAQEIFRL 10 132 406.5619701014944 1216.6640809046833 3 406.5617553591728 MULTI CID FTMS 0 0 0 16435 97020.96875 1.0 0 0.0 19 Unmodified _LPMAQEIFRL_ ENSG00000115459|ENST00000409013|ELMOD3;ENST00000410106.5_1_2:85598540-85618082:+|nuORF;ENST00000490508.5_1_2:85582731-85618082:+|nuORF;nc|ENSG00000115459|Q96FG2-2|ELMOD3;nc|ENSG00000115459|Q96FG2-6|ELMOD3 6.630372943996041 0.695967137280542 4 CP{I|L}VER{I|L} 7 6 31.19 0.0 0.0 2.5636 0.0 0.0 388.210358836127 0.0 388.210358836127 0.0 17.545094889371526 0.0 0.0 0 0.0 0.0 0.0 0.0 CP{I|L}VER{I|L} 2.5636 - 287 + 1 1.096 77068.0 0.4900000095367431 11484 4968 16435 HBL1_DMSO_200M_050219_2,16454 HBL1_DMSO_200M_050219_2,16454,LPMAQEIFRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16455 86.845 274.0 288190.0 25 0 28463.0 + 43079 VYLPHWCSI 9 122 559.279808098798 0 559.2795898318291 PEAK CID FTMS 0 0 0 16435 99587.734375 1.0 0 0.0 20 Unmodified _VYLPHWCSI_ REV__chr2:65031259-65037610|29|10.59|0.12|6.41|+|1|LINC02576,LINC02576|2 23.1484247019978 0.1725298825155634 4 {I|L}MMC(Carbamidomethyl (C))G 5 -1 16.542 0.0 0.0 1.4816 0.0 0.0 393.2261678559958 128.0719393365844 521.2981071925802 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}MMC(Carbamidomethyl (C))G 1.4816 - 211 + 1 1.096 64633.3 1.0 11485 4968 16435 HBL1_DMSO_200M_050219_2,16455 HBL1_DMSO_200M_050219_2,16455,VYLPHWCSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16457 86.851 118.0 421460.0 25 0 44979.0 + 30029 QTPEFFQDV 9 86 555.7588849302487 1109.5032169272972 2 555.7588989138603 MULTI CID FTMS 0 0 0 16456 401950.03125 0.2688132251481958 2 -0.2031402587890625 1 Unmodified _QTPEFFQDV_ ENSG00000169710|ENST00000306749|FASN 30.63653989081413 0.1413794767160703 4 [EP]TQ{M(Oxidation (M))|F}E 6 6 40.468 0.0 0.0 3.6474 0.0 0.0 0.0 375.15290984419136 375.15290984419136 20.34318117920506 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.2614393726401687 0.5 [EP]TQ{M(Oxidation (M))|F}E 3.6474 - 335 1 1.104 44932.0 1.0 11486 4969 16456 HBL1_DMSO_200M_050219_2,16457 HBL1_DMSO_200M_050219_2,16457,QTPEFFQDV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16458 86.853 78.0 599660.0 25 0 69668.0 + 25721 NIIPRFVQV 9 74 543.3271053479655 1084.6396577627308 2 543.3273803591728 MULTI CID FTMS 0 0 0 16456 356477.84375 0.3621223811001002 2 -0.2031402587890625 2 Unmodified _NIIPRFVQV_ ENSG00000171943|ENST00000367123|SRGAP2C;ENSG00000196369|ENST00000641863|SRGAP2B;ENSG00000266028|ENST00000573034|SRGAP2;nc|ENSG00000196369|P0DMP2|SRGAP2B 26.88365393820708 0.1891292719743517 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V 4 5 43.188 0.0 0.0 3.9817 0.0 0.0 0.0 642.3352144830686 642.3352144830686 30.71333751784365 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}V 3.9817 - 49 + 1 1.104 43542.5 1.0 11487 4969 16456 HBL1_DMSO_200M_050219_2,16458 HBL1_DMSO_200M_050219_2,16458,NIIPRFVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16459 86.855 94.0 405500.0 25 0 56442.0 36218 SVYIYYFLS 9 67 577.7898213629974 1153.5650897927949 2 577.7896606326103 MULTI CID FTMS 0 0 0 16456 713472.6875 1.0 0 0.0 3 Unmodified _SVYIYYFLS_ ENST00000359326.8_2_1:169798532-169798586:+|nuORF 16.942295170755138 0.3780752226737986 4 {[TV]|[{I|L}S]}[RP][DG]{I|L}V 8 7 24.587 0.0 0.0 2.1314 0.0 0.0 0.0 313.0828584096641 313.0828584096641 6.628487329057151 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.3494850021680094 0.0 {[TV]|[{I|L}S]}[RP][DG]{I|L}V 2.1314 - 41 1 1.104 37944.2 1.0 11488 4969 16456 HBL1_DMSO_200M_050219_2,16459 HBL1_DMSO_200M_050219_2,16459,SVYIYYFLS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16460 86.856 68.0 872330.0 25 0 117200.0 + 10979 GAQLSVGAISL 11 96 508.29299696537663 1014.5714409975532 2 508.2931091189384 MULTI CID FTMS 0 0 0 16456 613466.375 0.5350473594107267 -2 0.21160888671875 4 Unmodified _GAQLSVGAISL_ ENSG00000021488|ENST00000023064|SLC7A9 39.94969957227396 0.2131707853268865 4 {I|L}QSHS{I|L} 6 7 44.479 0.0 0.0 4.384 0.0 0.0 331.2112956544591 0.0 331.2112956544591 0.0 20.9604487998068 0.0 0.0 0 0.2887254899964357 0.0 0.6989700043360187 0.4247425010840047 {I|L}QSHS{I|L} 4.384 - 766 + 1 1.104 54040.4 1.0 11489 4969 16456 HBL1_DMSO_200M_050219_2,16460 HBL1_DMSO_200M_050219_2,16460,GAQLSVGAISL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16461 86.858 63.0 974040.0 25 0 70217.0 + -1 ATMTSPSLAF 10 98 521.248488967366 1040.482425001532 2 521.2487060427666 MULTI CID FTMS 0 0 0 16456 543230.5 1.0 0 0.0 5 Oxidation (M) _ATM(Oxidation (M))TSPSLAF_ REV__ENST00000455785.6_1_1:26226745-26227000:-|nuORF 20.453626601364224 0.5043500229302764 4 {[QS]|[NT]}DY[TP]{I|L}A{M(Oxidation (M))|F} 9 -1 {[QS]|[NT]}DY[TP]{I|L} + + 22.717 2.267 0.28184 2.1833 2.1833 44.725 0.0 0.0 0.0 0.0 9.221675119240516 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {[QS]|[NT]}DY[TP]{I|L}A{M(Oxidation (M))|F} 2.1833 - 116 + 1 1.104 54693.7 1.0 11490 4969 16456 HBL1_DMSO_200M_050219_2,16461 HBL1_DMSO_200M_050219_2,16461,ATMTSPSLAF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16462 86.86 67.0 753690.0 25 0 124870.0 + 25857 DGYEVENLI 9 91 526.2528016179889 1050.4910503027777 2 526.2513915896416 MULTI CID FTMS 0 0 0 16456 456131.1875 1.0 0 0.0 6 Unmodified _NLEETAFDI_ ENSG00000185019|ENST00000217173|UBOX5;nc|ENSG00000185019|O94941-2|UBOX5 14.838274106304384 0.4350285940865338 4 [DG]YEVR 6 8 25.182 0.0 0.0 2.3972 0.0 0.0 0.0 328.13293197685897 328.13293197685897 10.172203223519531 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 [DG]YEVR 2.3972 - 120 1 1.104 44476.1 1.0 11491 4969 16456 HBL1_DMSO_200M_050219_2,16462 HBL1_DMSO_200M_050219_2,16462,NLEETAFDI False False DGYEVENLI 86.859541 526.251391589642 3372515.75 16456.0 ENSG00000185019|ENST00000217173|UBOX5;;nc|ENSG00000185019|O94941-2|UBOX5 3.806645075480143 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16463 86.863 181.0 406810.0 25 0 59642.0 + 11817 GLNELDFIR 9 91 538.7900630799869 0 538.7903930544853 PEAK CID FTMS 0 0 0 16456 372490.03125 0.7699075517808981 -1 0.1370468139648437 7 Unmodified _GLNELDFIR_ REV__ENSG00000108381|ENST00000263080|ASPA 22.736283301280096 0.1762661025464585 4 ND{I|L}{M(Oxidation (M))|F}ER 6 -1 42.115 0.0 0.0 3.9157 0.0 0.0 170.10347824204024 128.07222925357658 298.17570749561685 0.0 0.0 0.0 0.0 0 1.274227503252014 0.0 0.0 0.4247425010840047 ND{I|L}{M(Oxidation (M))|F}ER 3.9157 - 334 + 1 1.104 62046.9 1.0 11492 4969 16456 HBL1_DMSO_200M_050219_2,16463 HBL1_DMSO_200M_050219_2,16463,GLNELDFIR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16464 86.865 87.0 566200.0 25 0 41248.0 + 34053 SLLDPVPEV 9 74 484.7689359093279 967.523318885456 2 484.7688781619072 MULTI CID FTMS 0 0 0 16456 364420.78125 0.8888858483902173 -1 0.1370468139648437 8 Unmodified _SLLDPVPEV_ ENSG00000089154|ENST00000300648|GCN1 36.506200033944 0.094635877243972 4 [EP]VVTV 6 6 37.638 0.0 0.0 3.8901 0.0 0.0 0.0 340.15165075484964 340.15165075484964 22.416892907146178 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.3252574989159953 0.0 [EP]VVTV 3.8901 - 155 1 1.104 46482.7 1.0 11493 4969 16456 HBL1_DMSO_200M_050219_2,16464 HBL1_DMSO_200M_050219_2,16464,SLLDPVPEV True True SLLDPVPEV 86.864991 484.768878161907 7962306.0 16456.0 ENSG00000089154|ENST00000300648|GCN1 5.379914283752441 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16465 86.869 190.0 225630.0 25 0 22578.0 + + 24468 DPFEVSYQI 9 79 549.2624122786312 1096.5102716240624 2 549.2616454958916 MULTI CID FTMS 0 0 0 16456 215921.84375 1.0 0 0.0 9 Unmodified _MIDSFDLGSI_ nc|ENSG00000183864|Q14106-2|TOB2;ENSG00000183864|ENST00000327492|TOB2;ENSG00000141232|ENST00000499247|TOB1 21.74664581756881 0.480091245866545 4 {NN|[MP]|[D{I|L}]|[EV]}MEVS 6 -1 43.148 0.0 0.0 3.9351 0.0 0.0 0.0 419.1935351340812 419.1935351340812 18.86953940194605 0.0 0.0 0.0 0 0.0 2.0 0.7742275032520141 0.0 {NN|[MP]|[D{I|L}]|[EV]}MEVS 3.9351 - 224 1 1.104 41040.9 1.0 11494 4969 16456 HBL1_DMSO_200M_050219_2,16465 HBL1_DMSO_200M_050219_2,16465,MIDSFDLGSI False False DPFEVSYQI 86.868676 549.261645495892 1880814.625 16456.0 nc|ENSG00000183864|Q14106-2|TOB2;;ENSG00000183864|ENST00000327492|TOB2;;ENSG00000141232|ENST00000499247|TOB1 4.142152468363444 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16466 86.882 800.0 261550.0 25 0 20880.0 + 2910 AVFPHLTVV 9 196 491.79031380013663 981.5660746670732 2 491.7898742556572 MULTI CID FTMS 0 0 0 16456 216563.796875 0.3613882722959323 2 -0.2031402587890625 10 Unmodified _AVFPHLTVV_ ENSG00000134825|ENST00000537328|TMEM258 74.39630413441286 0.0193995060682538 4 [H{I|L}]M{I|L}TVAVV 9 7 + 51.309 0.0 0.0 5.2273 5.2273 73.928 0.0 0.0 0.0 10.3330122870355 9.335295873671754 9.335295873671754 2.9149305519032254 0 0.4929928190999391 1.0 1.1307196863200843 0.0 [H{I|L}]M{I|L}TVAVV;[H{I|L}]TP{M(Oxidation (M))|F}VAVV;[H{I|L}]PT{M(Oxidation (M))|F}VAVV;[H{I|L}]P{M(Oxidation (M))|F}TVAVV;[H{I|L}]TPV{M(Oxidation (M))|F}AVV;[H{I|L}]PTV{M(Oxidation (M))|F}AVV;[H{I|L}]TVP{M(Oxidation (M))|F}AVV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{I|L}TVAVV;[{I|L}P]HT{M(Oxidation (M))|F}VAVV;[{I|L}P]H{M(Oxidation (M))|F}TVAVV 5.2273;4.9303;4.7814;4.673;4.6236;4.4747;4.4632;4.1745;3.7853;3.6769 -;-;-;-;-;-;-;-;-;- 1662 1 1.104 159828.9 0.8399999737739563 11495 4969 16456 HBL1_DMSO_200M_050219_2,16466 HBL1_DMSO_200M_050219_2,16466,AVFPHLTVV True True AVFPHLTVV 86.882491 491.789874255657 5187433.5 16456.0 ENSG00000134825|ENST00000537328|TMEM258 4.296201229095459 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16467 86.896 800.0 266550.0 25 0 7423.3 -1 0 130 1066.5047927952744 2130.995032657349 2 1067.009570300579 MULTI CID FTMS 0 0 0 16456 207009.625 0.606402818030857 2 -0.2031402587890625 11 4 [{I|L}T]GADTA{I|L}YC(Carbamidomethyl (C))C(Carbamidomethyl (C))Y 12 -1 49.462 0.0 0.0 2.3211 0.0 0.0 0.0 739.3647105403887 739.3647105403887 17.009337335193976 0.0 0.0 0.0 0 0.0 2.0 1.7179001828205482 0.0 [{I|L}T]GADTA{I|L}YC(Carbamidomethyl (C))C(Carbamidomethyl (C))Y 2.3211 - 16242 1 1.104 133516.5 0.8999999761581421 11496 4969 16456 HBL1_DMSO_200M_050219_2,16467 HBL1_DMSO_200M_050219_2,16467, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16468 86.9 162.0 350120.0 25 0 27927.0 + + 26251 NQLDGIHLL 9 102 511.7839143451453 1021.5532757570908 2 511.7852661013603 MULTI CID FTMS 0 0 0 16456 206697.75 0.0872591955602443 -6 0.5575942993164062 12 Unmodified _NQLDVALHL_ ENSG00000165819|ENST00000298717|METTL3 30.22481116460888 0.1466181017706357 4 {[QN]|[E{I|L}]|[KN]}{I|L}D{[VA]|[{I|L}G]}H{I|L}{I|L} 9 -1 + 27.707 0.0 0.0 2.7123 2.7123 75.318 0.0 0.0 0.0 5.311672978144173 3.767285528507969 3.767285528507969 9.391787630034491 0 0.5 0.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}D{[VA]|[{I|L}G]}H{I|L}{I|L};[VP][KG]{[VA]|[{I|L}G]}D{I|L}[HS];[H{I|L}]{I|L}[R{M(Oxidation (M))|F}]{I|L}[HS] 2.7123;1.7929;1.3581 -;-;- 200 + 1 1.104 46933.9 1.0 11497 4969 16456 HBL1_DMSO_200M_050219_2,16468 HBL1_DMSO_200M_050219_2,16468,NQLDVALHL False False NQLDGIHLL 86.899547 511.78526610136 1269030.25 16456.0 ENSG00000165819|ENST00000298717|METTL3 5.723876317342122 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16469 86.913 800.0 278420.0 25 0 21448.0 + 30269 QYMERLQLL 9 189 597.3208530327465 1192.627153132293 2 597.3209716677666 MULTI CID FTMS 0 0 0 16456 203551.140625 1.0 0 0.0 13 Unmodified _QYMERLQLL_ ENSG00000173171|ENST00000368376|MTX1;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;ENST00000495492.1_1_1:155182265-155182385:+|nuORF;ENST00000495589.5_1_1:155181271-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;nc|ENSG00000173171|Q13505-3|MTX1 149.91393105778798 0.0244608884021643 4 [YQ]MER{I|L}Q{I|L}{I|L} 9 0 + 66.624 0.0 0.0 5.5864 5.5864 83.983 0.0 0.0 0.0 13.228549995735785 16.109538765801048 13.228549995735785 9.208187539523747 0 1.6989700043360187 2.0 1.4749073637206092 2.0994850021680094 + + [YQ]MER{I|L}Q{I|L}{I|L};[YQ]MER{I|L}[AG]{I|L}{I|L};[AG]{I|L}REMYQ{I|L}{I|L};[Q{I|L}]REMYQ{I|L}{I|L};[AG]YMER{I|L}Q{I|L}{I|L};[AG]{I|L}REMY[AG]{I|L}{I|L};[{I|L}A]GREMYQ{I|L}{I|L};[Q{I|L}]REMY[AG]{I|L}{I|L};[AG]YMER{I|L}[AG]{I|L}{I|L};[AG]{I|L}RE[YV]{I|L}C(Carbamidomethyl (C)){I|L} 5.5864;4.8143;4.4772;4.2653;4.2206;3.7087;3.4965;3.4932;3.4521;3.2869 +;-;-;-;-;-;-;-;-;- + 4018 1 1.104 160765.4 0.9200000166893004 11498 4969 16456 HBL1_DMSO_200M_050219_2,16469 HBL1_DMSO_200M_050219_2,16469,QYMERLQLL True True QYMERLQLL 86.913378 597.320971667767 1990449.5 16456.0 ENST00000495492.1_1_1:155182265-155182385:+|nuORF;;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;;nc|ENSG00000173171|Q13505-3|MTX1;;ENSG00000173171|ENST00000368376|MTX1;;ENST00000495589.5_1_1:155181271-155183486:+|nuORF;;nc|ENSG00000173171|Q13505-2|MTX1 7.729159990946452 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16470 86.916 145.0 653540.0 25 0 76593.0 + 2297 AQIEAFVRL 9 103 523.8028097319658 1045.5910665307315 2 523.8043090701103 MULTI CID FTMS 0 0 0 16456 211219.921875 0.1088320003271865 -3 0.3515625 14 Unmodified _AQIEAFVRL_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000524795.5_1_15:66587446-66615029:+|nuORF;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;ENST00000565281.5_1_15:66585934-66615040:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 47.74868867922204 0.0453060283459952 4 [QA]{I|L}EA{M(Oxidation (M))|F}VR{I|L} 9 0 [QA] + + 52.963 19.476 9.7824 5.0654 5.0654 52.762 0.0 0.0 0.0 0.0 39.432342842105896 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 + + [QA]{I|L}EA{M(Oxidation (M))|F}VR{I|L} 5.0654 + + 262 + 1 1.104 78658.4 1.0 11499 4969 16456 HBL1_DMSO_200M_050219_2,16470 HBL1_DMSO_200M_050219_2,16470,AQIEAFVRL True True AQIEAFVRL 86.916291 523.80430907011 37803356.0 16456.0 ENST00000565281.5_1_15:66585934-66615040:+|nuORF;;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;;ENST00000524795.5_1_15:66587446-66615029:+|nuORF;;nc|ENSG00000166938|Q8TF46-2|DIS3L;;nc|ENSG00000166938|Q8TF46-3|DIS3L;;nc|ENSG00000166938|Q8TF46-4|DIS3L;;ENSG00000166938|ENST00000319212|DIS3L 5.28081750869751 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16471 86.932 800.0 149760.0 25 0 15683.0 + + -1 RQVDPLNEDVLL 12 98 705.8830312440672 1409.7515095549345 2 705.8839599490166 MULTI CID FTMS 0 0 0 16456 182095.46875 1.0 0 0.0 15 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LQIMLLC(Carbamidomethyl (C))FII_ nc|ENSG00000160584|Q9Y2K2-7|SIK3;nc|ENSG00000160584|Q9Y2K2-8|SIK3;ENSG00000160584|ENST00000445177|SIK3;nc|ENSG00000160584|Q9Y2K2|SIK3 13.90604991867851 0.7458848613461305 4 {[QV]|[N{I|L}]|[RA]|[KV]}RDP{I|L}NEDV{I|L}{I|L} 12 -1 + 71.368 0.0 0.0 5.0625 5.0625 69.655 0.0 0.0 0.0 0.8633577339526397 16.61181443446619 0.8633577339526397 0.8633577339526397 0 0.5 0.0 0.0 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}RDP{I|L}NEDV{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[RV]P{I|L}NEDV{I|L}{I|L};[{I|L}V]{M(Oxidation (M))|F}[HV]{I|L}NEDV{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))K]P{I|L}NEDV{I|L}{I|L};[{I|L}P]N[RD]{I|L}NEDV{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}RDP{I|L}GGEDV{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[RV]P{I|L}GGEDV{I|L}{I|L};[VS][PA][SG]P{I|L}NEDV{I|L}{I|L};[{I|L}P][C(Carbamidomethyl (C))K]P{I|L}GGEDV{I|L}{I|L};[{I|L}P][SG][SG]P{I|L}NEDV{I|L}{I|L} 5.0625;5.0012;4.9375;4.724;4.5105;4.4171;4.3558;4.2006;4.0786;4.0558 -;-;-;-;-;-;-;-;-;- 581 1 1.104 91227.7 0.8600000143051147 11500 4969 16456 HBL1_DMSO_200M_050219_2,16471 HBL1_DMSO_200M_050219_2,16471,MLQIMLLCFII False False RQVDPLNEDVLL 86.931574 705.883959949017 1460751.75 16456.0 nc|ENSG00000160584|Q9Y2K2-7|SIK3;;nc|ENSG00000160584|Q9Y2K2-8|SIK3;;ENSG00000160584|ENST00000445177|SIK3;;nc|ENSG00000160584|Q9Y2K2|SIK3 7.479288260142009 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16472 86.945 800.0 165430.0 25 0 5005.5 -1 0 133 888.9124553928784 1775.8103578525568 2 889.4151489138603 MULTI CID FTMS 0 0 0 16456 167740.59375 1.0 0 0.0 16 4 [KT]EY{M(Oxidation (M))|F}AQEQA[CS]VC(Carbamidomethyl (C)){I|L} 15 -1 + 90.548 0.0 0.0 5.099 5.099 73.879 0.0 0.0 0.0 60.60708781467833 11.160743531280843 11.160743531280843 3.0102999566398125 0 0.3494850021680094 0.0 0.8609243748081782 1.6382104921644451 [KT]EY{M(Oxidation (M))|F}AQEQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AQEQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AQEAGA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AQEAGA[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AQEAQ[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AEQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AEQAGA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AQEQA[CS]V[CG]{I|L};[KT]EY{M(Oxidation (M))|F}A[AG]EQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AQEAQ[CS]C(Carbamidomethyl (C))V{I|L} 5.099;4.9294;4.9206;4.7511;4.7053;4.6677;4.6519;4.5904;4.5904;4.5358 -;-;-;-;-;-;-;-;-;- 7117 + 1 1.104 92808.7 0.8399999737739563 11501 4969 16456 HBL1_DMSO_200M_050219_2,16472 HBL1_DMSO_200M_050219_2,16472, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16473 86.959 800.0 141470.0 25 0 14979.0 + 42795 VVISSDGQFAL 11 172 568.3034049009416 1134.592256868683 2 568.3033935427666 MULTI CID FTMS 0 0 0 16456 153115.140625 0.0404375140426246 23 -2.596717834472656 17 Unmodified _VVISSDGQFAL_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 18.1463463914782 0.6576820063886638 4 TY 2 11 14.949 0.0 0.0 1.3175 0.0 0.0 852.4704395643804 0.0 852.4704395643804 0.0 -2.05136871872881 -2.05136871872881 0.0 0 0.0 0.0 0.0 0.0 TY 1.3175 - 863 + 1 1.104 92855.7 0.7699999809265137 11502 4969 16456 HBL1_DMSO_200M_050219_2,16473 HBL1_DMSO_200M_050219_2,16473,VVISSDGQFAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16474 86.974 800.0 218620.0 25 0 25656.0 + 39905 VFPPSFREL 9 142 546.2980792061045 1090.5816054790089 2 546.2986328005791 MULTI CID FTMS 0 0 0 16456 108883.7109375 0.9319309527576356 -2 0.21160888671875 18 Unmodified _VFPPSFREL_ ENSG00000101052|ENST00000373030|IFT52 29.081581746732265 0.1611639662936252 4 [{M(Oxidation (M))|F}V]PPQY{I|L}D{I|L} 9 4 + 35.367 0.0 0.0 3.243 3.243 68.779 0.0 0.0 0.0 16.906801470242442 1.7215151174387555 1.7215151174387555 3.679767852945943 0 1.1237125054200234 0.638272163982407 0.2887254899964357 0.0 [{M(Oxidation (M))|F}V]PPQY{I|L}D{I|L};[{M(Oxidation (M))|F}V]PPQY{I|L}EV;[{M(Oxidation (M))|F}V]P{I|L}{M(Oxidation (M))|F}Q{I|L}D{I|L};[{M(Oxidation (M))|F}V]PP[AG]Y{I|L}D{I|L};[{M(Oxidation (M))|F}V]P{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}N{I|L};{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}{I|L}P{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]P{I|L}{M(Oxidation (M))|F}Q{I|L}EV;[{M(Oxidation (M))|F}V]P[YQ]P{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[TV]|[{I|L}S]}{[WT]|[RM]}{M(Oxidation (M))|F}{I|L}P{NN|[MP]|[D{I|L}]|[EV]};[{M(Oxidation (M))|F}V]PP[AG]Y{I|L}EV 3.243;2.9055;2.6909;2.3986;2.3629;2.3586;2.3535;2.1754;2.1206;2.0612 -;-;-;-;-;-;-;-;-;- 586 + 1 1.104 142200.8 0.6700000166893005 11503 4969 16456 HBL1_DMSO_200M_050219_2,16474 HBL1_DMSO_200M_050219_2,16474,VFPPSFREL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16475 86.988 800.0 137720.0 25 0 11461.0 + 29619 QLYQETLFADL 11 132 670.837568696429 1339.660584459658 2 670.8389160037041 MULTI CID FTMS 0 0 0 16456 104655.7265625 1.0 0 0.0 19 Unmodified _QLYQETLFADL_ REV__ENSG00000039319|ENST00000505560|ZFYVE16;REV__ENST00000510995.1_1_5:79729945-79735859:+|nuORF;REV__ENST00000512558.5_1_5:79729945-79747536:+|nuORF;REV__nc|ENSG00000039319|Q7Z3T8-3|ZFYVE16 18.373094154950223 0.6529654022026722 4 [Q{I|L}]Y[HK]{[{M(Oxidation (M))|F}D]|MM}YN{I|L} 10 -1 + 45.642 0.0 0.0 3.407 3.407 69.299 0.0 0.0 0.0 3.754445183039017 9.893122250559196 3.754445183039017 3.754445183039017 0 1.4690370897582286 0.8538719643217619 0.0 0.6549471895720985 [Q{I|L}]Y[HK]{[{M(Oxidation (M))|F}D]|MM}YN{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}C{I|L}{M(Oxidation (M))|F}NYN{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}C{I|L}[HQ]{I|L}C(Carbamidomethyl (C)){I|L};[Q{I|L}][C(Carbamidomethyl (C))R]{I|L}{M(Oxidation (M))|F}NYN{I|L};[Q{I|L}][{M(Oxidation (M))|F}E][HA]QQ{I|L}N{I|L};[{I|L}V]E{I|L}C{I|L}{M(Oxidation (M))|F}NYN{I|L};{[QN]|[E{I|L}]|[KN]}V{I|L}C{I|L}{M(Oxidation (M))|F}NYN{I|L};[Q{I|L}]Y[HK]{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};{[VA]|[{I|L}G]}AY[HK]{[{M(Oxidation (M))|F}D]|MM}YN{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}C{I|L}{M(Oxidation (M))|F}NYGG{I|L} 3.407;3.1267;2.6823;2.6773;2.5564;2.5223;2.519;2.4536;2.4515;2.4453 -;-;-;-;-;-;-;-;-;- 1292 1 1.104 85272.6 0.5899999737739563 11504 4969 16456 HBL1_DMSO_200M_050219_2,16475 HBL1_DMSO_200M_050219_2,16475,QLYQETLFADL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16476 87.002 800.0 77551.0 25 0 6971.9 -1 0 103 675.3381755880811 2022.992697364443 3 675.3403198122978 MULTI CID FTMS 0 0 0 16456 110507.796875 1.0 0 0.0 20 4 {I|L}PVE[R{I|L}] 6 -1 20.635 0.0 0.0 1.02 0.0 0.0 1297.5485721152431 0.0 1297.5485721152431 0.0 2.223731944050101 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}PVE[R{I|L}] 1.02 - 762 + 1 1.104 56866.0 0.5899999737739563 11505 4969 16456 HBL1_DMSO_200M_050219_2,16476 HBL1_DMSO_200M_050219_2,16476, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16478 87.007 25.0 2376500.0 25 0 144220.0 + 22265 LPRLTPPVL 9 86 503.32679011973016 1004.6390273062603 2 503.3264343142509 MULTI CID FTMS 0 0 0 16477 1433184.125 0.0977131664768675 3 -0.3096923828125 1 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 52.268347100219714 0.0353964759249114 4 [{I|L}P]{I|L}TRPPV{I|L} 9 2 + 76.207 0.0 0.0 7.5855 7.5855 96.641 0.0 0.0 0.0 15.535828280726308 62.02592203494491 15.535828280726308 76.20713441503513 0 0.7134679910804405 1.3010299956639813 1.1861818737241734 0.0 [{I|L}P]{I|L}TRPPV{I|L} 7.5855 - 329 1 1.115 49722.5 1.0 11506 4970 16477 HBL1_DMSO_200M_050219_2,16478 HBL1_DMSO_200M_050219_2,16478,LPRLTPPVL True True LPRLTPPVL 87.006713 503.326434314251 218498608.0 16477.0 nc|ENSG00000156261|P50990-2|CCT8;;nc|ENSG00000156261|P50990-3|CCT8;;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;;ENSG00000156261|ENST00000286788|CCT8 3.503145615259806 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16479 87.008 29.0 1635800.0 25 0 232720.0 + 20664 LLQQFWSDQ 9 73 582.7854289844591 1163.5563050357182 2 582.7860595583916 MULTI CID FTMS 0 0 0 16477 1594887.125 0.2393480515539665 2 -0.184600830078125 2 Unmodified _LLQQFWSDQ_ REV__ENSG00000134716|ENST00000371204|CYP2J2;REV__ENST00000466095.5_1_1:60366713-60392418:-|nuORF;REV__ENST00000469406.5_1_1:60370173-60392418:-|nuORF;REV__ENST00000492633.5_1_1:60370173-60378128:-|nuORF 11.640296217721598 0.521594087909532 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}{I|L}{I|L} 6 -1 33.288 0.0 0.0 2.8609 0.0 0.0 0.0 449.1544855379245 449.1544855379245 7.1040937697618745 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.3807196863200844 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}{I|L}{I|L} 2.8609 - 75 1 1.115 41691.1 1.0 11507 4970 16477 HBL1_DMSO_200M_050219_2,16479 HBL1_DMSO_200M_050219_2,16479,LLQQFWSDQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16480 87.009 14.0 6277400.0 25 0 622150.0 + 35868 SVLKSLVEI 9 95 494.30818695884494 986.60182098449 2 494.3084594607353 MULTI CID FTMS 0 0 0 16477 5528343.0 0.3007677589132555 -2 0.2944107055664062 3 Unmodified _SVLKSLVEI_ ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5 61.60191391372663 0.0251951588191061 4 [VS]{I|L}K{I|L}SVE{I|L} 9 2 + 78.707 0.0 0.0 7.9776 7.9776 86.204 0.0 0.0 0.0 16.249387366083 9.889917747712644 9.889917747712644 4.458865705675876 0 1.4604093769761874 2.0 0.6989700043360187 0.0 [VS]{I|L}K{I|L}SVE{I|L};[VS]{I|L}KS{I|L}VE{I|L};[VS]{I|L}KVTVE{I|L};{[TV]|[{I|L}S]}VK{I|L}SVE{I|L};{[TV]|[{I|L}S]}VKS{I|L}VE{I|L};{[TV]|[{I|L}S]}KV{I|L}SVE{I|L};{[TV]|[{I|L}S]}VKVTVE{I|L};{[TV]|[{I|L}S]}KVS{I|L}VE{I|L};[{I|L}V]SK{I|L}SVE{I|L};[K{I|L}]SV{I|L}SVE{I|L} 7.9776;7.5256;6.7324;6.3306;5.8786;5.4611;5.0854;5.0091;4.6801;4.3493 -;+;-;-;-;-;-;-;-;- + 809 1 1.115 72266.9 1.0 11508 4970 16477 HBL1_DMSO_200M_050219_2,16480 HBL1_DMSO_200M_050219_2,16480,SVLKSLVEI True True SVLKSLVEI 87.009071 494.308459460735 291913120.0 16477.0 ENSG00000065150|ENST00000651721|IPO5;;nc|ENSG00000065150|O00410-3|IPO5;;nc|ENSG00000065150|O00410-2|IPO5 3.3625364303588867 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16481 87.01 16.0 2502600.0 25 0 323360.0 + 34838 SQFQQEFPSL 10 68 605.79119129381 1209.56782965442 2 605.7915527224541 MULTI CID FTMS 0 0 0 16477 3413106.5 0.9207035433841368 1 -0.0457763671875 4 Unmodified _SQFQQEFPSL_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 61.60191391372663 0.0323840705564037 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EQ{[QS]|[NT]}{M(Oxidation (M))|F} 7 6 56.03 0.0 0.0 4.6323 0.0 0.0 0.0 312.1577093753762 312.1577093753762 17.439999637864474 0.0 0.0 0.0 0 1.0 1.0 0.805462187404089 1.1989700043360187 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EQ{[QS]|[NT]}{M(Oxidation (M))|F} 4.6323 - 624 1 1.115 36157.7 1.0 11509 4970 16477 HBL1_DMSO_200M_050219_2,16481 HBL1_DMSO_200M_050219_2,16481,SQFQQEFPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16482 87.011 37.0 1840100.0 25 0 388800.0 + 13210 HGLTVPLI 8 63 425.263333665381 848.5121143975621 2 425.2633849978447 MULTI CID FTMS 0 0 0 16477 2031592.5 0.7711471986169707 1 -0.0457763671875 5 Unmodified _HGLTVPLI_ ENSG00000113732|ENST00000519374|ATP6V0E1 45.7499826716795 0.1592378023510922 4 {[HG]|PP}{I|L}TV 5 3 24.922 0.0 0.0 2.9371 0.0 0.0 0.0 338.20826718090086 338.20826718090086 0.9691001300805624 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9247425010840048 0.0 + {[HG]|PP}{I|L}TV 2.9371 + + 81 1 1.115 60224.0 1.0 11510 4970 16477 HBL1_DMSO_200M_050219_2,16482 HBL1_DMSO_200M_050219_2,16482,HGLTVPLI False True HGLTVPLI 87.011427 425.263384997845 43742436.0 16477.0 ENSG00000113732|ENST00000519374|ATP6V0E1 5.226219177246094 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16483 87.013 29.0 2078000.0 25 0 242530.0 + 15720 IQYIPTELDQV 11 79 659.8482513120434 1317.6819496908868 2 659.8488647341728 MULTI CID FTMS 0 0 0 16477 2014958.0 0.3958170984371479 1 -0.0457763671875 6 Unmodified _IQYIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 43.77239144664712 0.1542841003880809 4 [TP]E{I|L}DQV 7 4 32.982 0.0 0.0 2.503 0.0 0.0 0.0 532.2802522634055 532.2802522634055 6.229494892538696 0.0 0.0 0.0 0 0.0 0.0 1.329689690656103 0.0 + [TP]E{I|L}DQV 2.503 + + 770 1 1.115 51668.9 1.0 11511 4970 16477 HBL1_DMSO_200M_050219_2,16483 HBL1_DMSO_200M_050219_2,16483,IQYIPTELDQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16484 87.014 40.0 1343900.0 25 0 183130.0 + 42566 VTPPGFQLV 9 75 479.2739339707902 956.5333150083804 2 479.2742187380791 MULTI CID FTMS 0 0 0 16477 1554541.0 0.620420949201057 2 -0.184600830078125 7 Unmodified _VTPPGFQLV_ ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6 25.399314129420983 0.2080152500878129 4 {M(Oxidation (M))|F}Q{I|L}S{I|L}V 6 7 37.44 0.0 0.0 3.9141 0.0 0.0 251.1274738996109 0.0 251.1274738996109 0.0 11.694699959806982 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.805462187404089 {M(Oxidation (M))|F}Q{I|L}S{I|L}V 3.9141 - 281 1 1.115 48349.4 1.0 11512 4970 16477 HBL1_DMSO_200M_050219_2,16484 HBL1_DMSO_200M_050219_2,16484,VTPPGFQLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16485 87.015 59.0 1258400.0 25 0 193470.0 + 1631 ALMAAPLSL 9 77 451.75274496202985 901.4909369908596 2 451.7528869509697 MULTI CID FTMS 0 0 0 16477 1362422.25 0.1049032013510301 55 -5.9864349365234375 8 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 49.66892048692302 0.0410958345688192 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 3 + 66.092 0.0 0.0 7.3315 7.3315 85.142 0.0 0.0 0.0 5.312799137384303 8.384767769392738 5.312799137384303 4.771212547196626 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}ASP{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A]N[NS]S{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{I|L}CAD{I|L}A{I|L};{[TV]|[{I|L}S]}MASP{I|L}A{I|L} 7.3315;6.8022;6.7421;6.0269;5.8252;5.6157;5.2057;5.1271;4.943;4.711 -;-;-;-;-;-;-;-;-;- 525 1 1.115 63493.6 1.0 11513 4970 16477 HBL1_DMSO_200M_050219_2,16485 HBL1_DMSO_200M_050219_2,16485,ALMAAPLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16486 87.016 39.0 1299200.0 25 0 127450.0 + 3359 AYPEYLITY 9 67 566.7819198959418 1131.5492868586834 2 566.7822143435478 MULTI CID FTMS 0 0 0 16477 1203362.75 0.2113819456594217 -3 0.3689727783203125 9 Unmodified _AYPEYLITY_ ENSG00000107854|ENST00000371627|TNKS2;ENSG00000173273|ENST00000310430|TNKS 23.1484247019978 0.2366544122328345 4 [EP]Y{I|L}AY 6 4 30.221 0.0 0.0 2.6708 0.0 0.0 0.0 392.18292878667097 392.18292878667097 4.46327628838408 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [EP]Y{I|L}AY 2.6708 - 164 1 1.115 47067.3 1.0 11514 4970 16477 HBL1_DMSO_200M_050219_2,16486 HBL1_DMSO_200M_050219_2,16486,AYPEYLITY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16487 87.018 65.0 1143400.0 25 0 86934.0 + 29592 QLVDIIEKV 9 109 528.8192103613729 0 528.8190795779228 PEAK CID FTMS 0 0 0 16477 1098291.25 0.0954911315915315 2 -0.184600830078125 10 Unmodified _QLVDIIEKV_ ENSG00000131467|ENST00000590720|PSME3;ENST00000593111.1_1_17:40986588-40991030:+|nuORF;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3 49.55428908609986 0.0328875595922215 4 VD{I|L}{I|L}EK 6 3 33.236 0.0 0.0 3.1484 0.0 0.0 241.14254636233244 114.05645166568593 355.1989980280184 0.0 0.0 0.0 0.0 0 0.5138793319624578 0.0 0.4247425010840047 0.1989700043360188 + VD{I|L}{I|L}EK 3.1484 + + 169 + 1 1.115 62727.8 1.0 11515 4970 16477 HBL1_DMSO_200M_050219_2,16487 HBL1_DMSO_200M_050219_2,16487,QLVDIIEKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16488 87.02 71.0 993260.0 25 0 179660.0 + 36271 SYFEKGPLTF 10 93 594.8005816308975 1187.5866103285948 2 594.8011352419853 MULTI CID FTMS 0 0 0 16477 825150.6875 0.8267185074795282 1 -0.0457763671875 11 Unmodified _SYFEKGPLTF_ ENSG00000172687|ENST00000683779|ZNF738;ENSG00000197020|ENST00000358296|ZNF100;nc|ENSG00000172687|Q8NE65-2|ZNF738 90.13494162714682 0.0093239051209448 4 {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}EKG[{I|L}P]T{M(Oxidation (M))|F} 10 0 + 74.72 0.0 0.0 6.2918 6.2918 90.275 0.0 0.0 0.0 18.956488204759395 15.026975159433531 15.026975159433531 19.30523450795789 0 1.7856668758921828 0.0 2.224907363720609 0.0 + + {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}EKG[{I|L}P]T{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{I|L}GKEMT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{I|L}GKE{M(Oxidation (M))|F}[MT];[{I|L}T][YV]GKE{M(Oxidation (M))|F}[MT];[{I|L}T][YV]GKEMT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}[WK][{I|L}P]T{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}EK[YR][VP];[HM]E[WK][{I|L}P]T{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{I|L}[WK]MT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[RH]KG{M(Oxidation (M))|F} 6.2918;4.6662;4.416;4.2236;3.6951;3.6421;2.8119;2.6733;2.6625;2.6411 +;-;-;-;-;-;-;-;-;- + 925 + 1 1.115 58392.7 1.0 11516 4970 16477 HBL1_DMSO_200M_050219_2,16488 HBL1_DMSO_200M_050219_2,16488,SYFEKGPLTF True True SYFEKGPLTF 87.01968 594.801135241985 33049896.0 16477.0 ENSG00000197020|ENST00000358296|ZNF100;;nc|ENSG00000172687|Q8NE65-2|ZNF738;;ENSG00000172687|ENST00000683779|ZNF738 11.55953852335612 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16489 87.021 57.0 1206300.0 25 0 122890.0 + 26033 NMIVDLDNV 9 92 516.755378403762 1031.496203874324 2 516.7557861208916 MULTI CID FTMS 0 0 0 16477 769924.125 0.7923250355262875 1 -0.0457763671875 12 Unmodified _NMIVDLDNV_ ENSG00000132305|ENST00000410111|IMMT;ENST00000409258.2_1_2:86386442-86398424:-|nuORF;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;ENST00000490238.5_1_2:86385703-86389088:-|nuORF;nc|ENSG00000132305|Q16891-2|IMMT;nc|ENSG00000132305|Q16891-3|IMMT;nc|ENSG00000132305|Q16891-4|IMMT 32.30548876998284 0.1201446275138228 4 [MN]{I|L}VD 5 4 31.159 0.0 0.0 3.0207 0.0 0.0 0.0 456.210045997624 456.210045997624 13.394396170858723 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.4247425010840047 + [MN]{I|L}VD 3.0207 + + 94 1 1.115 59596.1 1.0 11517 4970 16477 HBL1_DMSO_200M_050219_2,16489 HBL1_DMSO_200M_050219_2,16489,NMIVDLDNV True True NMIVDLDNV 87.021136 516.755786120892 8620640.0 16477.0 ENST00000409258.2_1_2:86386442-86398424:-|nuORF;;nc|ENSG00000132305|Q16891-3|IMMT;;ENST00000490238.5_1_2:86385703-86389088:-|nuORF;;nc|ENSG00000132305|Q16891-4|IMMT;;ENST00000474969.5_1_2:86385703-86422514:-|nuORF;;ENSG00000132305|ENST00000410111|IMMT;;nc|ENSG00000132305|Q16891-2|IMMT 5.402936140696208 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16490 87.023 105.0 704830.0 25 0 116970.0 + 45760 YYISPRLTF 9 74 580.3114262644643 1158.6082995957286 2 580.3116332888603 MULTI CID FTMS 0 0 0 16477 526096.0625 0.1767721659876517 2 -0.184600830078125 13 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 24.99096001346401 0.2132109383330889 4 YY{I|L}SP 5 4 62.519 0.0 0.0 5.396 0.0 0.0 0.0 532.2888887994749 532.2888887994749 50.73583540823249 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + YY{I|L}SP 5.396 + + 87 + 1 1.115 60353.8 1.0 11518 4970 16477 HBL1_DMSO_200M_050219_2,16490 HBL1_DMSO_200M_050219_2,16490,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16491 87.026 130.0 524840.0 25 0 75748.0 + 8999 FAYDGKDYLTL 11 78 653.3220020878606 1304.629451242521 2 653.3219482302666 MULTI CID FTMS 0 0 0 16477 488924.4375 0.747747092425845 -1 0.1573638916015625 14 Unmodified _FAYDGKDYLTL_ ENSG00000204592|ENST00000376630|HLA-E 83.27773906761396 0.0052189922445383 4 {[YD]|[{M(Oxidation (M))|F}M]}[KG]{I|L}T[{M(Oxidation (M))|F}V]YAE 11 9 + 58.14 0.0 0.0 4.4565 4.4565 67.193 0.0 0.0 0.0 3.354032540302292 1.0784094103974695 1.0784094103974695 0.796896906561031 0 0.7302046884880937 1.0969100130080565 1.566901560044258 0.0 {[YD]|[{M(Oxidation (M))|F}M]}[KG]{I|L}T[{M(Oxidation (M))|F}V]YAE;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}[KG]T[{M(Oxidation (M))|F}V]YAE;{[YD]|[{M(Oxidation (M))|F}M]}[KG]D{I|L}YT{I|L}A{M(Oxidation (M))|F};{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]Y{I|L}D{[QC]|[C(Carbamidomethyl (C))A]}T{I|L};{[YD]|[{M(Oxidation (M))|F}M]}[KG]{I|L}DYT{I|L}A{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}[KG]DY{I|L}T{I|L}A{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}[KG]DYT{I|L}A{M(Oxidation (M))|F};[KG]DY{I|L}T[{M(Oxidation (M))|F}V]YAE;{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]YD{I|L}{[QC]|[C(Carbamidomethyl (C))A]}T{I|L};{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]{I|L}YD{[QC]|[C(Carbamidomethyl (C))A]}T{I|L} 4.4565;4.3954;4.3738;4.1994;4.1431;4.1431;4.082;4.024;3.9686;3.9686 -;-;-;-;-;-;-;-;-;- 1503 1 1.115 57775.8 1.0 11519 4970 16477 HBL1_DMSO_200M_050219_2,16491 HBL1_DMSO_200M_050219_2,16491,FAYDGKDYLTL True True FAYDGKDYLTL 87.026063 653.321948230267 13164144.0 16477.0 ENSG00000204592|ENST00000376630|HLA-E 6.180752754211426 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16492 87.029 125.0 429830.0 25 0 44489.0 + -1 SLSIAIKDCL 10 92 560.3060224624597 1118.5974919917194 2 560.3116332888603 MULTI CID FTMS 0 0 0 16477 466975.40625 0.1363443984683659 -5 0.6027374267578125 15 Carbamidomethyl (C) _SLSIAIKDC(Carbamidomethyl (C))L_ REV__ENSG00000181961|ENST00000314721|OR4A16 20.453626601364224 0.5043500229302764 4 {[TV]|[{I|L}S]}[PG]{I|L}EA 7 -1 22.025 0.0 0.0 1.969 0.0 0.0 0.0 448.22106311892566 448.22106311892566 0.0823341208833738 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.2059771852360797 0.0 {[TV]|[{I|L}S]}[PG]{I|L}EA 1.969 - 369 1 1.115 46883.8 1.0 11520 4970 16477 HBL1_DMSO_200M_050219_2,16492 HBL1_DMSO_200M_050219_2,16492,SLSIAIKDCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16493 87.031 113.0 305840.0 25 0 37174.0 + + 43861 KMWEEAISL 9 63 553.780652555794 1105.5467521783878 2 553.7809936404228 MULTI CID FTMS 0 0 0 16477 437904.28125 1.0 0 0.0 16 Unmodified _YFLGFYPSI_ ENST00000523351.5_1_5:169188379-169509859:+|nuORF;ENSG00000134516|ENST00000520908|DOCK2 19.438996006549623 0.310492472477042 4 S{I|L} 2 -1 25.701 0.0 0.0 2.3247 0.0 0.0 887.419797077605 0.0 887.419797077605 0.0 12.513487579716768 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 S{I|L} 2.3247 + + 19 + 1 1.115 35806.5 1.0 11521 4970 16477 HBL1_DMSO_200M_050219_2,16493 HBL1_DMSO_200M_050219_2,16493,YFLGFYPSI False False KMWEEAISL 87.031038 553.780993640423 7292071.0 16477.0 ENST00000523351.5_1_5:169188379-169509859:+|nuORF;;ENSG00000134516|ENST00000520908|DOCK2 2.0656185944875083 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16494 87.034 155.0 352470.0 25 0 58834.0 + 15432 IPPPVIMV 8 72 433.26449796231606 864.5144429914321 2 433.2646667361259 MULTI CID FTMS 0 0 0 16477 362756.84375 0.6571173787172029 3 -0.3096923828125 17 Unmodified _IPPPVIMV_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 24.20995872069341 0.5349487244130675 4 [{I|L}P][VP]P{I|L}MV 8 2 + 31.444 0.0 0.0 3.6372 3.6372 71.004 0.0 0.0 0.0 4.539974558725248 4.66113029490927 4.539974558725248 4.539974558725248 0 0.6549471895720985 1.5228787452803376 0.0 0.0 [{I|L}P][VP]P{I|L}MV;[VP]PP{I|L}{I|L}MV;[{M(Oxidation (M))|F}T]{I|L}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{I|L}P][VP]{I|L}PMV;{[HG]|PP}VP{I|L}{I|L}MV;[VP]P{I|L}P{I|L}MV;[{M(Oxidation (M))|F}T]{I|L}P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[HG]|PP}V{I|L}P{I|L}MV;[VP]P{I|L}{I|L}PMV;[{M(Oxidation (M))|F}T]P{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.6372;3.112;3.098;3.0853;2.9999;2.7638;2.7498;2.6517;2.2119;2.1979 -;-;-;-;-;-;-;-;-;- 80 1 1.115 49057.8 1.0 11522 4970 16477 HBL1_DMSO_200M_050219_2,16494 HBL1_DMSO_200M_050219_2,16494,IPPPVIMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16495 87.04 296.0 253170.0 25 0 18379.0 24921 MPPHPANFFF 10 102 602.7818489997615 1203.5491450663228 2 602.7823974490166 MULTI CID FTMS 0 0 0 16477 349506.90625 0.6912059500878082 1 -0.0457763671875 18 Unmodified _MPPHPANFFF_ ENST00000486855.1_1_1:114268430-114281397:-|nuORF 14.838274106304384 0.5985701837916485 4 MPY[NP][WH]{I|L}{M(Oxidation (M))|F} 9 6 + 56.382 0.0 0.0 4.6847 4.6847 67.93 0.0 0.0 0.0 8.317402350274023 0.7431681552070017 0.7431681552070017 0.7431681552070017 0 1.5501648626366045 1.5228787452803376 0.0 0.0 MPY[NP][WH]{I|L}{M(Oxidation (M))|F};MP[QA]EA[KG]M{[QN]|[E{I|L}]|[KN]};MP[QA]E{I|L}HTM{M(Oxidation (M))|F};MP[KA]E{I|L}HTM{M(Oxidation (M))|F};MP[QA]E[KG]AM{[QN]|[E{I|L}]|[KN]};MP[QA]E{I|L}HH{[QN]|[E{I|L}]|[KN]};MP[QA]PC[KG]M{[QN]|[E{I|L}]|[KN]};MP[KA]PC[KG]M{[QN]|[E{I|L}]|[KN]};MP[QA]E[KQ]M{[QN]|[E{I|L}]|[KN]};MPY[HV][KG]M{[QN]|[E{I|L}]|[KN]} 4.6847;4.6229;4.6044;4.6044;4.439;4.2811;4.1227;4.1227;4.0765;3.9738 -;-;-;-;-;-;-;-;-;- 1639 + 1 1.115 58240.0 1.0 11523 4970 16477 HBL1_DMSO_200M_050219_2,16495 HBL1_DMSO_200M_050219_2,16495,MPPHPANFFF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16496 87.043 158.0 267980.0 25 0 73690.0 31230 RLRRKWEEKI 10 66 471.9530042323211 1412.8371832971634 3 471.9521362185478 MULTI CID FTMS 0 0 0 16477 347768.28125 1.0 0 0.0 19 Unmodified _RLRRKWEEKI_ ENSG00000100368|ENST00000403662|CSF2RB;nc|ENSG00000100368|P32927-2|CSF2RB 1.6526216038709556 0.7189921496796233 4 {I|L} 1 9 12.474 0.0 0.0 0.88292 0.0 0.0 1281.7422563946227 0.0 1281.7422563946227 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.88292 + + 14 + 1 1.115 50515.1 1.0 11524 4970 16477 HBL1_DMSO_200M_050219_2,16496 HBL1_DMSO_200M_050219_2,16496,RLRRKWEEKI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16497 87.048 277.0 314390.0 25 0 33432.0 + 10090 FPSVFQSL 8 111 462.744003502894 0 462.7439453005791 PEAK CID FTMS 0 0 0 16477 285631.875 0.1090911148117915 29 -3.221405029296875 20 Unmodified _FPSVFQSL_ REV__ENSG00000163319|ENST00000295491|MRPS18C;REV__ENST00000455300.1_1_X:53852417-53852804:+|nuORF 20.871210003555333 0.4015059659087983 4 {M(Oxidation (M))|F}TE 3 -1 18.5 0.0 0.0 2.0033 0.0 0.0 461.2245659884068 82.06693445377186 543.2915004421786 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 {M(Oxidation (M))|F}TE 2.0033 - 148 + 1 1.115 72638.9 1.0 11525 4970 16477 HBL1_DMSO_200M_050219_2,16497 HBL1_DMSO_200M_050219_2,16497,FPSVFQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16499 87.054 217.0 268220.0 25 0 36225.0 + 34825 SQFPGAITL 9 87 467.2557031428642 932.4968533525284 2 467.2559692263603 MULTI CID FTMS 0 0 0 16498 265828.4375 0.889170766788024 -2 0.2031402587890625 1 Unmodified _SQFPGAITL_ ENST00000263083.10_1_17:1944800-1946395:+|nuORF;ENST00000571710.5_1_17:1945525-1946395:+|nuORF;nc|ENSG00000262664|Q8WZ82|OVCA2 29.081581746732265 0.1611639662936252 4 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L} 8 2 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L} + + 21.454 14.791 2.1119 2.3007 2.3007 44.862 0.0 0.0 0.0 0.0 1.1780319450422567 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L} 2.3007 - 116 + 1 1.115 49821.2 1.0 11526 4971 16498 HBL1_DMSO_200M_050219_2,16499 HBL1_DMSO_200M_050219_2,16499,SQFPGAITL False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 16500 87.058 187.0 316200.0 25 0 40450.0 + 11567 GIYTGFIKV 9 95 499.2902375562403 996.5659221792806 2 499.2899047732353 MULTI CID FTMS 0 0 0 16498 164709.6875 0.039222867920772 4 -0.5237884521484375 2 Unmodified _GIYTGFIKV_ ENSG00000153179|ENST00000542104|RASSF3 36.12702656103203 0.0967173616627612 4 {[VA]|[{I|L}G]}YTG{M(Oxidation (M))|F}{I|L}KV 9 0 + 62.86 0.0 0.0 6.3076 6.3076 80.806 0.0 0.0 0.0 27.147642715192504 4.191293077419758 4.191293077419758 4.191293077419758 0 0.6307196863200843 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}YTG{M(Oxidation (M))|F}{I|L}KV;{[VA]|[{I|L}G]}YTG{M(Oxidation (M))|F}{I|L}VK;{[VA]|[{I|L}G]}YTG{M(Oxidation (M))|F}KV{I|L};{[VA]|[{I|L}G]}YTG{M(Oxidation (M))|F}K{I|L}V 6.3076;5.8871;5.2626;5.2626 +;-;-;- + 181 + 1 1.115 53810.5 1.0 11527 4971 16498 HBL1_DMSO_200M_050219_2,16500 HBL1_DMSO_200M_050219_2,16500,GIYTGFIKV True True GIYTGFIKV 87.057956 499.289904773235 90997482.0 16498.0 ENSG00000153179|ENST00000542104|RASSF3 6.840591748555501 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16501 87.061 173.0 496730.0 25 0 36246.0 + -1 MNWRYCRLWCL 11 77 837.382014185484 1672.7494754377678 2 837.3828002810478 MULTI CID FTMS 0 0 0 16498 414412.8125 1.0 0 0.0 3 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))NWRYC(Carbamidomethyl (C))RLWC(Carbamidomethyl (C))L_ REV__ENST00000584052.5_1_18:21043977-21044085:+|nuORF 1.4819007175156935 0.86815623132643 4 DEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 12 -1 87.018 0.0 0.0 5.2021 0.0 0.0 248.0912800519547 0.0 248.0912800519547 0.0 63.328956512079344 0.0 0.0 0 0.7614393726401688 0.0 0.3252574989159953 1.2302046884880935 DEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 5.2021 - 851 1 1.115 65882.1 1.0 11528 4971 16498 HBL1_DMSO_200M_050219_2,16501 HBL1_DMSO_200M_050219_2,16501,MNWRYCRLWCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16502 87.075 800.0 254660.0 25 0 64364.0 -1 0 76 1173.1679619706183 3516.482056512056 3 1173.502124011517 MULTI CID FTMS 0 0 0 16498 316907.46875 0.0207908299413173 -3 0.3401870727539062 4 4 Y[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]YG 5 -1 12.218 0.0 0.0 0.34746 0.0 0.0 1311.4642083884098 1511.7670509131656 2823.2312593015754 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]YG 0.34746 - 120 + 1 1.115 164967.4 0.9100000262260436 11529 4971 16498 HBL1_DMSO_200M_050219_2,16502 HBL1_DMSO_200M_050219_2,16502, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16503 87.079 167.0 473670.0 25 0 84216.0 + + 24515 RIINGIIISV 10 75 549.3559890749159 1096.6974252166317 2 549.3561279177666 MULTI CID FTMS 0 0 0 16498 279660.34375 0.2668068249075208 -2 0.2031402587890625 5 Unmodified _MIPLIVLLSV_ nc|ENSG00000122986|Q96D96-4|HVCN1;ENSG00000122986|ENST00000242607|HVCN1;HVCN1|p.R208Q|1|0.41|ENSG00000122986|chr12:110651237-110651237|C/T|missense_variant;nc|ENSG00000122986|Q96D96-3|HVCN1;nc|ENSG00000122986|Q96D96-2|HVCN1;chr12:110661448-110688625|40|10.35|0.61|4.09|-|ENST00000439744|HVCN1,HVCN1 34.10243960390752 0.2198439752719791 4 {I|L}{I|L}{I|L}SV 5 -1 50.701 0.0 0.0 4.6231 0.0 0.0 553.3341397063007 0.0 553.3341397063007 0.0 28.91895667918575 0.0 0.0 0 1.274227503252014 0.0 0.0 0.0 {I|L}{I|L}{I|L}SV 4.6231 - 93 1 1.115 65639.6 1.0 11530 4971 16498 HBL1_DMSO_200M_050219_2,16503 HBL1_DMSO_200M_050219_2,16503,MIPLIVLLSV False False RIINGIIISV 87.078504 549.356127917767 18899944.0 16498.0 nc|ENSG00000122986|Q96D96-4|HVCN1;;ENSG00000122986|ENST00000242607|HVCN1;;HVCN1|p.R208Q|1|0.41|ENSG00000122986|chr12:110651237-110651237|C/T|missense_variant;;nc|ENSG00000122986|Q96D96-3|HVCN1;;nc|ENSG00000122986|Q96D96-2|HVCN1;;chr12:110661448-110688625|40|10.35|0.61|4.09|-|ENST00000439744|HVCN1,HVCN1 4.278849999109904 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16504 87.083 221.0 366550.0 25 0 59265.0 + 45536 YTYEFDFSKV 10 79 649.8012648889613 1297.5879768447226 2 649.8008911013603 MULTI CID FTMS 0 0 0 16498 273486.71875 0.9988926271820876 -1 0.0457763671875 6 Unmodified _YTYEFDFSKV_ ENSG00000126814|ENST00000261249|TRMT5 69.33821966488729 0.0189579340102328 4 YTYE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}SKV 10 0 + 101.84 0.0 0.0 7.8483 7.8483 95.848 0.0 0.0 0.0 88.11008975480375 7.773109370204452 7.773109370204452 26.977437731477423 0 0.7134679910804405 2.0 1.6549471895720984 0.2059771852360797 + + YTYE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}SKV;YTYE{M(Oxidation (M))|F}[YV]SKV 7.8483;5.7693 +;- + 209 + 1 1.115 65434.3 1.0 11531 4971 16498 HBL1_DMSO_200M_050219_2,16504 HBL1_DMSO_200M_050219_2,16504,YTYEFDFSKV True True YTYEFDFSKV 87.082685 649.80089110136 2865183.0 16498.0 ENSG00000126814|ENST00000261249|TRMT5 10.51507536570231 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16505 87.087 217.0 300450.0 25 0 39333.0 + 43905 YFYDPDVGNF 10 93 618.7641335036449 1235.5137140740896 2 618.7644531130791 MULTI CID FTMS 0 0 0 16498 269978.65625 1.0 0 0.0 7 Unmodified _YFYDPDVGNF_ ENSG00000171720|ENST00000305264|HDAC3;ENST00000492506.1_1_5:141016042-141016357:-|nuORF;ENST00000495485.1_1_5:141009604-141016357:-|nuORF 43.85829265575387 0.1168243637355526 4 [DP]VGD[WM]RN{M(Oxidation (M))|F} 10 8 + 29.614 0.0 0.0 2.3969 2.3969 65.937 0.0 0.0 0.0 4.006375246153905 7.028937514676482 4.006375246153905 3.0102999566398125 0 0.5172203223519531 0.0 0.3807196863200844 0.0 [DP]VGD[WM]RN{M(Oxidation (M))|F};[DP]DVG[WM]RN{M(Oxidation (M))|F};[DP]VDG[WM]RN{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}YY[DP]RN{M(Oxidation (M))|F};[DP]VGD{M(Oxidation (M))|F}YYN{M(Oxidation (M))|F};[WD][TA]D[DP]RN{M(Oxidation (M))|F};[DP]VDG{M(Oxidation (M))|F}YYN{M(Oxidation (M))|F};[DP]DVG{M(Oxidation (M))|F}YYN{M(Oxidation (M))|F};[DP]DV[WM]GRN{M(Oxidation (M))|F};[DP]VD[WM]GRN{M(Oxidation (M))|F} 2.3969;2.1533;2.1533;2.0727;2.0107;1.8863;1.7671;1.7671;1.6015;1.6015 -;-;-;-;-;-;-;-;-;- 603 1 1.115 55775.9 1.0 11532 4971 16498 HBL1_DMSO_200M_050219_2,16505 HBL1_DMSO_200M_050219_2,16505,YFYDPDVGNF True True YFYDPDVGNF 87.086806 618.764453113079 2916367.75 16498.0 ENST00000492506.1_1_5:141016042-141016357:-|nuORF;;ENST00000495485.1_1_5:141009604-141016357:-|nuORF;;ENSG00000171720|ENST00000305264|HDAC3 6.88559087117513 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16506 87.091 244.0 320200.0 25 0 56458.0 + 40891 VLRLSDKRINV 11 82 438.2745572325306 1311.8018422977918 3 438.2746154665947 MULTI CID FTMS 0 0 0 16498 257788.40625 0.9959571227550388 2 -0.263916015625 8 Unmodified _VLRLSDKRINV_ REV__ENSG00000102858|ENST00000262370|MGRN1;REV__nc|ENSG00000102858|O60291-3|MGRN1;REV__nc|ENSG00000102858|O60291-4|MGRN1;REV__nc|ENSG00000102858|O60291|MGRN1 12.240655878213236 0.7805268987462184 4 [VG]{M(Oxidation (M))|F}[KC]{I|L} 6 -1 43.033 0.0 0.0 3.2804 0.0 0.0 0.0 661.4188326471311 661.4188326471311 15.447406013437188 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.805462187404089 [VG]{M(Oxidation (M))|F}[KC]{I|L} 3.2804 - 136 + 1 1.115 69122.0 1.0 11533 4971 16498 HBL1_DMSO_200M_050219_2,16506 HBL1_DMSO_200M_050219_2,16506,VLRLSDKRINV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16507 87.095 160.0 350790.0 25 0 28268.0 + 31909 RTVELFYDV 9 71 571.2983645264138 1140.5821761196275 2 571.2989379763603 MULTI CID FTMS 0 0 0 16498 230469.875 0.9071414004522032 1 -0.138824462890625 9 Unmodified _RTVELFYDV_ ENSG00000197448|ENST00000358406|GSTK1;ENST00000473649.1_1_7:142960606-142961786:+|nuORF;ENST00000489654.1_1_7:142960606-142961286:+|nuORF;ENST00000494735.1_1_7:142960606-142960717:+|nuORF;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;nc|ENSG00000197448|Q9Y2Q3-4|GSTK1 19.361941925380144 0.3125782356748823 4 [VS][W{I|L}]{I|L}{M(Oxidation (M))|F}YDV 9 4 + 44.671 0.0 0.0 3.9165 3.9165 73.505 0.0 0.0 0.0 0.915149811213496 20.23387189888816 0.915149811213496 6.020599913279618 0 0.8807196863200843 0.0 0.0 0.0 [VS][W{I|L}]{I|L}{M(Oxidation (M))|F}YDV;QQ[KT]{I|L}{M(Oxidation (M))|F}YDV;[VS]Q[RK]{M(Oxidation (M))|F}YDV;[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{M(Oxidation (M))|F}YDV;{[QS]|[NT]}V[RK]{M(Oxidation (M))|F}YDV;{[QV]|[N{I|L}]|[RA]|[KV]}S[RK]{M(Oxidation (M))|F}YDV;[VS][AG][RK]{M(Oxidation (M))|F}YDV 3.9165;3.3886;3.3886;3.3037;3.2343;2.9703;2.5813 -;-;-;-;-;-;- 149 1 1.115 48248.6 1.0 11534 4971 16498 HBL1_DMSO_200M_050219_2,16507 HBL1_DMSO_200M_050219_2,16507,RTVELFYDV False True RTVELFYDV 87.094512 571.29893797636 2259582.5 16498.0 ENST00000494735.1_1_7:142960606-142960717:+|nuORF;;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;;ENST00000489654.1_1_7:142960606-142961286:+|nuORF;;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;;nc|ENSG00000197448|Q9Y2Q3-4|GSTK1;;ENST00000473649.1_1_7:142960606-142961786:+|nuORF;;ENSG00000197448|ENST00000358406|GSTK1 6.1394273440043134 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16508 87.108 800.0 150970.0 25 0 7869.7 -1 0 136 1035.1685503444908 0 1035.172778308392 PEAK CID FTMS 0 0 0 16498 219701.9375 1.0 0 0.0 10 4 {M(Oxidation (M))|F}D{I|L}RD 5 -1 25.305 0.0 0.0 1.2234 0.0 0.0 1051.855825198944 367.1781099908813 1419.0339351898251 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.5774509799928715 {M(Oxidation (M))|F}D{I|L}RD 1.2234 - 10105 + 1 1.115 80161.3 0.8299999833106995 11535 4971 16498 HBL1_DMSO_200M_050219_2,16508 HBL1_DMSO_200M_050219_2,16508, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16509 87.123 800.0 103750.0 25 0 6597.7 -1 0 116 1021.9539895286468 2041.8934261240936 2 1022.454821765423 MULTI CID FTMS 0 0 0 16498 192039.46875 0.5747800847083895 2 -0.263916015625 11 4 A{I|L}[C(Carbamidomethyl (C))S]AVMA[NS]VSQ 13 -1 50.717 0.0 0.0 2.4838 0.0 0.0 705.2937689969436 0.0 705.2937689969436 0.0 26.269829222416263 0.0 0.0 0 0.0 0.0 2.1307196863200843 0.6549471895720985 A{I|L}[C(Carbamidomethyl (C))S]AVMA[NS]VSQ 2.4838 - 12661 + 1 1.115 58598.3 0.7799999713897705 11536 4971 16498 HBL1_DMSO_200M_050219_2,16509 HBL1_DMSO_200M_050219_2,16509, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16510 87.137 800.0 235820.0 25 0 65135.0 + 31036 RLGYGAPA 8 128 402.7208609063859 803.4271688795718 2 402.7211181521416 MULTI CID FTMS 0 0 0 16498 177626.25 0.5999514258087281 2 -0.263916015625 12 Unmodified _RLGYGAPA_ REV__ENST00000367999.8_1_1:161136243-161136698:+|nuORF 10.183394434864962 0.7604730176254005 4 R{I|L} 2 -1 16.938 0.0 0.0 2.1082 0.0 0.0 0.0 531.2201894612739 531.2201894612739 7.405308685972303 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 R{I|L} 2.1082 + + 28 + 1 1.115 148699.2 0.5899999737739563 11537 4971 16498 HBL1_DMSO_200M_050219_2,16510 HBL1_DMSO_200M_050219_2,16510,RLGYGAPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16511 87.151 800.0 180740.0 25 0 12464.0 + 44027 YIHVHFLEV 9 168 386.209328806326 1155.606157019178 3 386.2088500857353 MULTI CID FTMS 0 0 0 16498 150702.03125 1.0 0 0.0 13 Unmodified _YIHVHFLEV_ ENSG00000197429|ENST00000396478|IPP;nc|ENSG00000197429|Q9Y573-2|IPP 20.871210003555333 0.2717241269066626 4 [Y{I|L}]HVH{M(Oxidation (M))|F} 6 3 31.604 0.0 0.0 2.7348 0.0 0.0 0.0 356.1805654745256 356.1805654745256 15.406075122407684 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [Y{I|L}]HVH{M(Oxidation (M))|F} 2.7348 + + 353 1 1.115 121003.1 0.5199999809265137 11538 4971 16498 HBL1_DMSO_200M_050219_2,16511 HBL1_DMSO_200M_050219_2,16511,YIHVHFLEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16512 87.166 800.0 158590.0 25 0 6125.6 -1 0 115 881.9053812635528 1761.7962095939056 2 881.9056274294853 MULTI CID FTMS 0 0 0 16498 130018.9140625 1.0 0 0.0 14 4 [KT]EY{M(Oxidation (M))|F}ANQEMQTC(Carbamidomethyl (C)){I|L} 14 -1 + 90.422 0.0 0.0 5.1324 5.1324 68.769 0.0 0.0 0.0 4.559319556497243 6.709412807357751 4.559319556497243 0.2996322337744317 0 0.2302046884880938 0.0 1.1307196863200843 1.4731975075880328 [KT]EY{M(Oxidation (M))|F}ANQEMQTC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQEMQTGC{I|L};[KT]EY{M(Oxidation (M))|F}ANQEMQSAC{I|L};[KT]EY{M(Oxidation (M))|F}AE{I|L}EMQTC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AE{I|L}EMQTGC{I|L};[KT]EY{M(Oxidation (M))|F}ANEQMQTC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANEQMQTGC{I|L};[YQ]TQMEQNA{M(Oxidation (M))|F}YK[{I|L}V];[YQ]TQMEQNA{M(Oxidation (M))|F}YQ[{I|L}V];[KT]EY{M(Oxidation (M))|F}AE{I|L}EMQSAC{I|L} 5.1324;5.1154;4.9445;4.9235;4.9065;4.8616;4.8446;4.7516;4.7516;4.7356 -;-;-;-;-;-;-;-;-;- 26429 + 1 1.115 89919.1 0.4699999988079071 11539 4971 16498 HBL1_DMSO_200M_050219_2,16512 HBL1_DMSO_200M_050219_2,16512, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16513 87.18 800.0 93964.0 25 0 17345.0 + 24499 MIIRHVFEKLK 11 122 707.4245804113117 1412.8346078894233 2 707.4257690310478 MULTI CID FTMS 0 0 0 16498 120601.4140625 0.7420620129445924 2 -0.263916015625 15 Unmodified _MIIRHVFEKLK_ REV__ENSG00000136546|ENST00000643258|SCN7A 3.2813086475875832 0.8596665074481906 4 {[QN]|[E{I|L}]|[KN]}M[YG]{I|L} 6 -1 17.361 0.0 0.0 1.2288 0.0 0.0 0.0 703.4714236455358 703.4714236455358 3.716110699496884 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.0 {[QN]|[E{I|L}]|[KN]}M[YG]{I|L} 1.2288 - 248 1 1.115 62873.8 0.6399999856948853 11540 4971 16498 HBL1_DMSO_200M_050219_2,16513 HBL1_DMSO_200M_050219_2,16513,MIIRHVFEKLK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16514 87.187 375.0 300620.0 25 0 26650.0 + 34058 SLLDYGDIP 9 153 496.7482049596627 991.4818569861254 2 496.7468749880791 MULTI CID FTMS 0 0 0 16498 98114.859375 1.0 0 0.0 16 Unmodified _SLLDYGDIP_ ENST00000336714.7_1_20:18488551-18491514:+|nuORF;ENST00000450074.5_2_20:18488293-18491514:+|nuORF;ENST00000474619.1_1_20:18488684-18491514:+|nuORF 34.10243960390752 0.1078313939113124 4 VQT{I|L}VH{I|L} 7 8 35.723 0.0 0.0 3.603 0.0 0.0 183.00268170801013 0.0 183.00268170801013 0.0 -2.390469152170077 -2.390469152170077 0.0 0 0.0 0.0 0.2302046884880938 0.4247425010840047 VQT{I|L}VH{I|L} 3.603 - 546 + 1 1.115 88287.7 1.0 11541 4971 16498 HBL1_DMSO_200M_050219_2,16514 HBL1_DMSO_200M_050219_2,16514,SLLDYGDIP True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16516 87.191 31.0 2125400.0 25 0 301670.0 + 2298 AQIEAFVRL 9 59 523.8028097319658 1045.5910665307315 2 523.8035766482353 MULTI CID FTMS 0 0 0 16515 1940788.75 1.0 0 0.0 1 Unmodified _AQIEAFVRL_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000524795.5_1_15:66587446-66615029:+|nuORF;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;ENST00000565281.5_1_15:66585934-66615040:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 47.74868867922204 0.0453060283459952 4 [QA]{I|L}EA{M(Oxidation (M))|F}V[R{I|L}] 9 0 [QA] + + 50.45 9.4762 4.7597 4.825 4.825 51.762 0.0 0.0 0.0 0.0 29.05713190801641 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.6237125054200234 + + [QA]{I|L}EA{M(Oxidation (M))|F}V[R{I|L}] 4.825 + + 80 + 1 1.12 57202.7 1.0 11542 4972 16515 HBL1_DMSO_200M_050219_2,16516 HBL1_DMSO_200M_050219_2,16516,AQIEAFVRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16517 87.193 62.0 601360.0 25 0 82927.0 + + 20272 SQVQQLISL 9 68 508.29299696537663 1014.5714409975532 2 508.2932311892509 MULTI CID FTMS 0 0 0 16515 559588.25 0.488056440778469 1 -0.125091552734375 2 Unmodified _LLDRDALSI_ ENSG00000021776|ENST00000156471|AQR 23.1484247019978 0.2366544122328345 4 {I|L}{[QS]|[NT]}HS{I|L} 6 -1 33.901 0.0 0.0 3.3414 0.0 0.0 331.2147648274345 0.0 331.2147648274345 0.0 20.406075122407685 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 {I|L}{[QS]|[NT]}HS{I|L} 3.3414 - 130 + 1 1.12 34622.7 1.0 11543 4972 16515 HBL1_DMSO_200M_050219_2,16517 HBL1_DMSO_200M_050219_2,16517,LLDRDALSI False False SQVQQLISL 87.192905 508.293231189251 19841958.0 16515.0 ENSG00000021776|ENST00000156471|AQR 0.9826526045799256 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16518 87.194 20.0 2664200.0 25 0 258810.0 + 7432 EGLRVLTQL 9 64 514.8089850336797 1027.6034171341594 2 514.8088256716728 MULTI CID FTMS 0 0 0 16515 2348944.0 0.5485723467171985 -1 0.138824462890625 3 Unmodified _EGLRVLTQL_ ENSG00000186526|ENST00000612078|CYP4F8 36.506200033944 0.094635877243972 4 {[QN]|[E{I|L}]|[KN]}GAA{I|L}{I|L}TQ{I|L} 10 4 + 71.732 0.0 0.0 6.9805 6.9805 86.178 0.0 0.0 0.0 20.67410004652736 46.379967404511234 20.67410004652736 6.53212513775344 0 1.110924374808178 1.0 0.7742275032520141 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}GAA{I|L}{I|L}TQ{I|L};{[QN]|[E{I|L}]|[KN]}G[RV]{I|L}TQ{I|L};{[QN]|[E{I|L}]|[KN]}GAA{I|L}{I|L}T[AG]{I|L};{[QN]|[E{I|L}]|[KN]}RR{I|L}TQ{I|L};{[QN]|[E{I|L}]|[KN]}G[RV]{I|L}T[AG]{I|L};{[QN]|[E{I|L}]|[KN]}RR{I|L}T[AG]{I|L};{[QN]|[E{I|L}]|[KN]}GAA{I|L}{I|L}G[TA]{I|L};{[QN]|[E{I|L}]|[KN]}G[RV]{I|L}G[TA]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]{I|L}{I|L}TQ{I|L};{[QN]|[E{I|L}]|[KN]}RR{I|L}G[TA]{I|L} 6.9805;6.3448;6.0887;5.9602;5.4487;5.0589;4.9691;4.3291;4.2353;3.9393 -;-;-;-;-;-;-;-;-;- 160 1 1.12 46329.2 1.0 11544 4972 16515 HBL1_DMSO_200M_050219_2,16518 HBL1_DMSO_200M_050219_2,16518,EGLRVLTQL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16519 87.195 31.0 1530400.0 25 0 171550.0 + 31518 RQIDQFLVV 9 50 559.322218087941 1116.629883242682 2 559.3223754763603 MULTI CID FTMS 0 0 0 16515 1472472.25 0.2897555273261338 -2 0.184600830078125 4 Unmodified _RQIDQFLVV_ ENSG00000057935|ENST00000405094|MTA3;ENSG00000149480|ENST00000278823|MTA2;ENST00000531261.1_1_11:62365080-62365595:-|nuORF;nc|ENSG00000057935|Q9BTC8-2|MTA3;nc|ENSG00000149480|O94776-2|MTA2 12.240655878213236 0.5053430591993562 4 [{I|L}V]{[WN]|[YH]}Q{M(Oxidation (M))|F}{I|L}VV 9 4 + 37.253 0.0 0.0 3.3362 3.3362 76.344 0.0 0.0 0.0 8.484769324350559 25.034241220071543 8.484769324350559 9.208187539523756 0 0.6549471895720985 1.154901959985743 0.0 0.0 [{I|L}V]{[WN]|[YH]}Q{M(Oxidation (M))|F}{I|L}VV;[{I|L}V]{[WN]|[YH]}[AG]{M(Oxidation (M))|F}{I|L}VV 3.3362;2.5115 -;- 19 1 1.12 44327.7 1.0 11545 4972 16515 HBL1_DMSO_200M_050219_2,16519 HBL1_DMSO_200M_050219_2,16519,RQIDQFLVV False True RQIDQFLVV 87.195262 559.32237547636 91933280.0 16515.0 nc|ENSG00000057935|Q9BTC8-2|MTA3;;ENST00000531261.1_1_11:62365080-62365595:-|nuORF;;ENSG00000149480|ENST00000278823|MTA2;;nc|ENSG00000149480|O94776-2|MTA2;;ENSG00000057935|ENST00000405094|MTA3 6.693989117940267 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16520 87.197 84.0 826440.0 25 0 125470.0 + 2574 ASIDILHSI 9 100 484.7738053092339 967.533057685268 2 484.7737914919853 MULTI CID FTMS 0 0 0 16515 495631.125 0.4611234153366939 -1 0.138824462890625 5 Unmodified _ASIDILHSI_ ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11 71.13359017698441 0.0206607516130725 4 {[SA]|[TG]}{I|L}D{I|L}{I|L}HTV 9 2 + 77.083 0.0 0.0 7.967 7.967 85.646 0.0 0.0 0.0 22.37643016799588 4.074853265782679 4.074853265782679 4.074853265782679 0 0.6382104921644451 1.5228787452803376 1.885151878060192 0.0 {[SA]|[TG]}{I|L}D{I|L}{I|L}HTV;{[SA]|[TG]}{I|L}D{I|L}{I|L}HS{I|L};{[SA]|[TG]}{I|L}D{I|L}{I|L}{I|L}[HS];{[SA]|[TG]}[KG][VG]{I|L}HTV;{NN|[MP]|[D{I|L}]|[EV]}PKKD[RP];{[SA]|[TG]}[KG][VG]{I|L}HS{I|L};{[TV]|[{I|L}S]}H{I|L}[{M(Oxidation (M))|F}V][RP];[VP]G[KS]{I|L}D[RP];[EP]VKKD[RP];{[SA]|[TG]}{I|L}[{M(Oxidation (M))|F}V]{I|L}[YR] 7.967;7.5458;6.9157;4.0565;3.694;3.6353;3.4619;3.3595;3.3137;3.2649 -;+;-;-;-;-;-;-;-;- + 658 + 1 1.12 55046.4 1.0 11546 4972 16515 HBL1_DMSO_200M_050219_2,16520 HBL1_DMSO_200M_050219_2,16520,ASIDILHSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16521 87.199 72.0 744780.0 25 0 61369.0 + 16500 KALQFLEEV 9 83 538.8037443648501 1075.5929357965 2 538.8054077029228 MULTI CID FTMS 0 0 0 16515 489764.3125 0.3811057697124311 -1 0.138824462890625 6 Unmodified _KALQFLEEV_ ENSG00000146731|ENST00000275603|CCT6A;nc|ENSG00000146731|P40227-2|CCT6A 43.9818466556824 0.0535980856389242 4 [KA]{I|L}Q{M(Oxidation (M))|F}{I|L}EEV 9 0 + 62.053 0.0 0.0 5.7692 5.7692 71.01 0.0 0.0 0.0 0.0050844460847798 15.1059905927697 0.0050844460847798 0.0050844460847798 0 0.7134679910804405 0.0 0.0 1.586696871556164 + + [KA]{I|L}Q{M(Oxidation (M))|F}{I|L}EEV;{[VA]|[{I|L}G]}A[KA]{M(Oxidation (M))|F}{I|L}EEV;{[VA]|[{I|L}G]}A{M(Oxidation (M))|F}[KA]{I|L}EEV;[KA]{I|L}[AG]{M(Oxidation (M))|F}{I|L}EEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[KA]{I|L}EEV;[Q{I|L}][KA]{M(Oxidation (M))|F}{I|L}EEV;[Q{I|L}]{M(Oxidation (M))|F}[KA]{I|L}EEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG][KA]{I|L}EEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VG][RK]EEV 5.7692;5.7687;5.3038;4.9131;4.6581;4.3053;3.8404;3.802;2.2383 +;-;-;-;-;-;-;-;- + 388 1 1.12 47559.8 1.0 11547 4972 16515 HBL1_DMSO_200M_050219_2,16521 HBL1_DMSO_200M_050219_2,16521,KALQFLEEV True True KALQFLEEV 87.198835 538.805407702923 10639094.0 16515.0 nc|ENSG00000146731|P40227-2|CCT6A;;ENSG00000146731|ENST00000275603|CCT6A 3.646190087000529 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16522 87.2 70.0 571910.0 25 0 52482.0 + -1 LYVCMRPSL 9 68 577.7898213629974 1153.5650897927949 2 577.7911254763603 MULTI CID FTMS 0 0 0 16515 464329.9375 0.6508026805160639 3 -0.3849639892578125 7 Carbamidomethyl (C),Oxidation (M) _LYVC(Carbamidomethyl (C))M(Oxidation (M))RPSL_ REV__ENST00000474657.5_1_20:1350522-1350615:-|nuORF 13.50788311687929 0.4710407108020397 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PE 4 -1 30.177 0.0 0.0 2.616 0.0 0.0 0.0 690.3123119544196 690.3123119544196 7.22811589762955 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PE 2.616 - 65 + 1 1.12 34997.4 1.0 11548 4972 16515 HBL1_DMSO_200M_050219_2,16522 HBL1_DMSO_200M_050219_2,16522,LYVCMRPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16523 87.202 80.0 814090.0 25 0 89884.0 + 20589 LLPDLIQKV 9 89 519.8315692198626 1037.648585506525 2 519.8318359255791 MULTI CID FTMS 0 0 0 16515 355009.90625 1.0 0 0.0 8 Unmodified _LLPDLIQKV_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS 34.40172386719151 0.1061884637610825 4 {I|L}{I|L}PD{I|L}{I|L}QKV 9 0 + 50.686 0.0 0.0 4.8847 4.8847 80.964 0.0 0.0 0.0 35.535826259057856 6.82445109645716 6.82445109645716 9.208187539523747 0 0.9247425010840048 2.0 0.0 0.3807196863200844 + + {I|L}{I|L}PD{I|L}{I|L}QKV;{I|L}{I|L}PD{I|L}{I|L}[AG]KV;{I|L}{I|L}{I|L}[DP]{I|L}QKV;{I|L}{I|L}{I|L}[DP]{I|L}[AG]KV 4.8847;3.9973;2.6721;1.7847 +;-;-;- + 265 + 1 1.12 54147.5 1.0 11549 4972 16515 HBL1_DMSO_200M_050219_2,16523 HBL1_DMSO_200M_050219_2,16523,LLPDLIQKV True True LLPDLIQKV 87.202322 519.831835925579 3063922.25 16515.0 nc|ENSG00000141279|P55786-2|NPEPPS;;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;;ENSG00000141279|ENST00000322157|NPEPPS 5.902997811635335 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16524 87.207 252.0 301070.0 25 0 59567.0 -1 0 81 399.7235490430389 797.4325451528779 2 399.7234374880791 MULTI CID FTMS 0 0 0 16515 263234.34375 0.346929646522573 2 -0.2522735595703125 9 4 {[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}K{I|L} 6 -1 + 50.851 0.0 0.0 6.3769 6.3769 75.207 0.0 0.0 0.0 26.478174818886373 0.9691001300805624 0.9691001300805624 0.9691001300805624 0 0.6505149978319906 2.0 0.0 0.2742275032520141 {[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}K{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{I|L}{I|L}K;{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{M(Oxidation (M))|F}K{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{M(Oxidation (M))|F}{I|L}K 6.3769;6.2554;5.2867;5.1652 -;-;-;- 45 + 1 1.12 67192.4 1.0 11550 4972 16515 HBL1_DMSO_200M_050219_2,16524 HBL1_DMSO_200M_050219_2,16524, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16525 87.211 194.0 359070.0 25 0 39803.0 + 163 AALSKIFAV 9 102 460.2842650513589 918.553977169518 2 460.2838622927666 MULTI CID FTMS 0 0 0 16515 261430.3125 0.7433572503804635 -1 0.138824462890625 10 Unmodified _AALSKIFAV_ ENSG00000164933|ENST00000297578|SLC25A32;ENST00000523701.1_1_8:104413742-104414267:-|nuORF 43.85829265575387 0.0542763391141878 4 AA{I|L}S 4 5 42.677 0.0 0.0 4.6461 0.0 0.0 0.0 573.3413638600758 573.3413638600758 4.378873201147485 0.0 0.0 0.0 0 1.0994850021680094 1.6989700043360187 0.0 0.0 + AA{I|L}S 4.6461 + + 391 + 1 1.12 59428.3 1.0 11551 4972 16515 HBL1_DMSO_200M_050219_2,16525 HBL1_DMSO_200M_050219_2,16525,AALSKIFAV True True AALSKIFAV 87.210722 460.283862292767 2648395.0 16515.0 ENST00000523701.1_1_8:104413742-104414267:-|nuORF;;ENSG00000164933|ENST00000297578|SLC25A32 5.86892557144165 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16526 87.225 800.0 193630.0 25 0 50414.0 -1 0 69 1178.498126874652 3532.472551224156 3 1178.833300769329 MULTI CID FTMS 0 0 0 16515 255769.765625 0.938645225831438 -1 0.138824462890625 11 4 GYW 3 -1 11.682 0.0 0.0 0.33072 0.0 0.0 1960.6591351395875 1162.626982457406 3123.286117596994 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYW 0.33072 - 61 + 1 1.12 127864.8 0.8399999737739563 11552 4972 16515 HBL1_DMSO_200M_050219_2,16526 HBL1_DMSO_200M_050219_2,16526, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16527 87.238 800.0 208730.0 25 0 42311.0 -1 0 131 1029.831039667116 3086.471289601548 3 1030.498095691204 MULTI CID FTMS 0 0 0 16515 226434.25 0.1169265315174938 6 -0.755645751953125 12 4 SANVM[EP] 7 -1 50.974 0.0 0.0 1.6515 0.0 0.0 2340.1068202635074 0.0 2340.1068202635074 0.0 15.52787919587422 0.0 0.0 0 0.0 0.0 1.1989700043360187 0.4247425010840047 SANVM[EP] 1.6515 - 2954 1 1.12 114790.0 0.8899999856948853 11553 4972 16515 HBL1_DMSO_200M_050219_2,16527 HBL1_DMSO_200M_050219_2,16527, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16528 87.245 365.0 216190.0 25 0 39956.0 + 30374 RALLLGAL 8 87 413.779380436728 825.544207940256 2 413.7790710330009 MULTI CID FTMS 0 0 0 16515 190360.140625 0.5470508049782277 -1 0.138824462890625 13 Unmodified _RALLLGAL_ ENST00000281187.9_1_11:134094584-134094950:+|nuORF;ENST00000525095.2_1_11:134094621-134094950:+|nuORF 30.22481116460888 0.4082965392918993 4 [{I|L}A]R{I|L}{I|L}GA{I|L} 8 2 + 66.363 0.0 0.0 8.0387 8.0387 93.641 0.0 0.0 0.0 14.463950151760656 49.963213064351706 14.463950151760656 11.40978057358332 0 1.424742501084005 1.0969100130080565 0.0 0.0 [{I|L}A]R{I|L}{I|L}GA{I|L};[{I|L}A]R{I|L}{I|L}Q{I|L} 8.0387;6.6566 -;- 109 1 1.12 66875.5 1.0 11554 4972 16515 HBL1_DMSO_200M_050219_2,16528 HBL1_DMSO_200M_050219_2,16528,RALLLGAL False True RALLLGAL 87.245012 413.779071033001 2661925.25 16515.0 ENST00000281187.9_1_11:134094584-134094950:+|nuORF;;ENST00000525095.2_1_11:134094621-134094950:+|nuORF 2.0013620257377625 2.0 True 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16529 87.25 290.0 327950.0 25 0 50480.0 10553 FVFCLALGL 9 108 491.7731941622071 981.531835391214 2 491.7736083865166 MULTI CID FTMS 0 0 0 16515 156793.953125 0.5625072381764493 -1 0.138824462890625 14 Unmodified _FVFCLALGL_ ENSG00000186377|ENST00000371901|CYP4X1 36.46614268402704 0.0948557732959553 4 {[VA]|[{I|L}G]}[HM]E{I|L}{I|L}G{I|L} 9 5 + 62.048 0.0 0.0 6.3215 6.3215 80.961 0.0 0.0 0.0 12.525749891599531 16.478174818886373 12.525749891599531 4.247425010840047 0 0.91944517631652 2.0 0.0 0.0 {[VA]|[{I|L}G]}[HM]E{I|L}{I|L}G{I|L};{[VA]|[{I|L}G]}[HM]E{I|L}G{I|L}{I|L};{[YC]|[HE]}{I|L}{I|L}GM{I|L}G{I|L};{[QN]|[E{I|L}]|[KN]}H{I|L}GM{I|L}G{I|L};{[YC]|[HE]}{I|L}VAM{I|L}G{I|L};{[YC]|[HE]}{I|L}VMA{I|L}G{I|L};{[YC]|[HE]}{I|L}{[MG]|[TS]}{I|L}{I|L}G{I|L};{[QN]|[E{I|L}]|[KN]}HVAM{I|L}G{I|L};{[QN]|[E{I|L}]|[KN]}HVMA{I|L}G{I|L};{[QN]|[E{I|L}]|[KN]}H{[MG]|[TS]}{I|L}{I|L}G{I|L} 6.3215;5.8888;5.0454;4.9181;4.866;4.866;4.7672;4.7387;4.7387;4.64 -;-;-;-;-;-;-;-;-;- 933 1 1.12 76969.5 1.0 11555 4972 16515 HBL1_DMSO_200M_050219_2,16529 HBL1_DMSO_200M_050219_2,16529,FVFCLALGL True False AMVHELLGI 87.250324 491.773608386517 2133599.5 16515.0 ENSG00000136631|ENST00000644510|VPS45;;ENST00000477558.1_1_1:150049710-150054979:+|nuORF;;nc|ENSG00000136631|Q9NRW7-2|VPS45 4.137383143107097 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16530 87.264 800.0 217510.0 25 0 29337.0 + + -1 FIMDDPAGNSYL 12 155 671.8029793569859 1341.5914057807718 2 671.8040649294853 MULTI CID FTMS 0 0 0 16515 147826.515625 0.7745646761586872 -2 0.184600830078125 15 Carbamidomethyl (C) _C(Carbamidomethyl (C))LQQDQTSSYL_ ENSG00000109917|ENST00000227322|ZPR1 16.149105407346934 0.6992268271266642 4 [DP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}D[PA]GNSY{I|L} 12 -1 + 51.301 0.0 0.0 3.8239 3.8239 66.947 0.0 0.0 0.0 6.751958052467408 15.863810029816191 6.751958052467408 1.840601887269564 0 1.079689690656103 0.9208187539523752 0.7742275032520141 0.3252574989159953 [DP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}D[PA]GNSY{I|L};[DP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}D[QP]NSY{I|L};[DP]{M(Oxidation (M))|F}D{M(Oxidation (M))|F}[PA]GNSY{I|L};[DP]{M(Oxidation (M))|F}D{M(Oxidation (M))|F}[QP]NSY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MDD[PA]GNSY{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SNG[PA]D{M(Oxidation (M))|F}H{[CT]|[{M(Oxidation (M))|F}G]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MDD[QP]NSY{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SN[QP]D{M(Oxidation (M))|F}H{[CT]|[{M(Oxidation (M))|F}G]};[DP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}D[QP]GGSY{I|L};[DP]V[Y{M(Oxidation (M))|F}][PA]GNSY{I|L} 3.8239;3.6867;3.4682;3.331;3.2379;3.1811;3.1007;3.0439;3.0062;2.934 -;-;-;-;-;-;-;-;-;- 5432 1 1.12 129825.2 0.7599999904632568 11556 4972 16515 HBL1_DMSO_200M_050219_2,16530 HBL1_DMSO_200M_050219_2,16530,CLQQDQTSSYL False False FIMDDPAGNSYL 87.264161 671.804064929485 2519537.25 16515.0 ENSG00000109917|ENST00000227322|ZPR1 6.992025375366211 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16531 87.279 800.0 79062.0 25 0 3987.8 -1 0 88 796.7053753993331 2387.094296798199 3 797.0394775271416 MULTI CID FTMS 0 0 0 16515 142213.609375 1.0 0 0.0 16 4 [YK]YPPPP 7 -1 37.445 0.0 0.0 1.5686 0.0 0.0 0.0 1541.6425193648802 1541.6425193648802 4.749321833847873 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.7302046884880937 [YK]YPPPP 1.5686 - 2259 1 1.12 51711.7 0.7200000286102295 11557 4972 16515 HBL1_DMSO_200M_050219_2,16531 HBL1_DMSO_200M_050219_2,16531, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16532 87.286 377.0 369920.0 25 0 60317.0 + 13004 HAPSIVFI 8 105 442.2557528620715 882.496952790943 2 442.2560302615166 MULTI CID FTMS 0 0 0 16515 144573.3125 0.3609255041813049 -1 0.138824462890625 17 Unmodified _HAPSIVFI_ ENSG00000100764|ENST00000261303|PSMC1;ENST00000555787.1_1_14:90734518-90735894:+|nuORF;nc|ENSG00000100764|P62191-2|PSMC1 52.69307289633392 0.1265801145616722 4 [HA][PS]{I|L}V{M(Oxidation (M))|F}{I|L} 8 0 + 46.514 0.0 0.0 5.2707 5.2707 76.483 0.0 0.0 0.0 18.304074772359016 9.731975075880328 9.731975075880328 4.044387449636204 0 0.7742275032520141 1.5228787452803376 1.086696871556164 0.0 + + [HA][PS]{I|L}V{M(Oxidation (M))|F}{I|L};[HA]V[TP]V{M(Oxidation (M))|F}{I|L};[{I|L}A][PS]HV{M(Oxidation (M))|F}{I|L};[PS]{I|L}AHV{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}PAHV{M(Oxidation (M))|F}{I|L};[PS][HA]{I|L}V{M(Oxidation (M))|F}{I|L};[PS]{I|L}V[HA]{M(Oxidation (M))|F}{I|L};[HV]A[TP]V{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}PV[HA]{M(Oxidation (M))|F}{I|L} 5.2707;4.8124;3.1966;3.1649;2.9259;2.5218;1.687;1.6644;1.448 +;-;-;-;-;-;-;-;- + 240 1 1.12 112130.6 1.0 11558 4972 16515 HBL1_DMSO_200M_050219_2,16532 HBL1_DMSO_200M_050219_2,16532,HAPSIVFI True True HAPSIVFI 87.28622 442.256030261517 3129800.75 16515.0 ENSG00000100764|ENST00000261303|PSMC1;;ENST00000555787.1_1_14:90734518-90735894:+|nuORF;;nc|ENSG00000100764|P62191-2|PSMC1 5.770184675852458 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16533 87.29 205.0 307490.0 25 0 48455.0 + 36377 SYQEMIANL 9 104 534.7556743518703 1067.4967957705403 2 534.7553588747978 MULTI CID FTMS 0 0 0 16515 144057.171875 0.5216548522372126 -1 0.138824462890625 18 Unmodified _SYQEMIANL_ ENSG00000116649|ENST00000376957|SRM 62.57269311338072 0.0246576765497938 4 {I|L}MESC(Carbamidomethyl (C)){I|L} 6 7 42.459 0.0 0.0 3.9774 0.0 0.0 316.1754589558905 0.0 316.1754589558905 0.0 25.023656471886326 0.0 0.0 0 0.3807196863200844 0.0 1.1307196863200843 0.0 {I|L}MESC(Carbamidomethyl (C)){I|L} 3.9774 - 393 + 1 1.12 53720.5 1.0 11559 4972 16515 HBL1_DMSO_200M_050219_2,16533 HBL1_DMSO_200M_050219_2,16533,SYQEMIANL True True SYQEMIANL 87.29014 534.755358874798 2476750.75 16515.0 ENSG00000116649|ENST00000376957|SRM 7.072892347971599 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16534 87.304 800.0 193670.0 25 0 28004.0 + 9075 FFFDKTEEL 9 164 588.2850943610065 1174.5556357888129 2 588.2855102419853 MULTI CID FTMS 0 0 0 16515 126463.2109375 0.7123867064965842 -1 0.138824462890625 19 Unmodified _FFFDKTEEL_ ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4 38.17557092003332 0.0854718145212029 4 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}TE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E 9 8 + 62.557 0.0 0.0 5.326 5.326 70.861 0.0 0.0 0.0 2.70925956221307 2.70925956221307 2.70925956221307 0.925230508543038 0 0.4247425010840047 0.0 1.916386562212267 0.1344005005252609 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}TE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}TE{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}E;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}E{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}E{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ET{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}ET{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{[QV]|[N{I|L}]|[RA]|[KV]}YTE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E;{[QV]|[N{I|L}]|[RA]|[KV]}YTE{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}E;[VS]G{M(Oxidation (M))|F}TE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E;{[VA]|[{I|L}G]}GYTE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E 5.326;5.2473;5.0954;5.0166;4.8121;4.7333;4.7304;4.6517;4.5101;4.4557 -;-;-;-;-;-;-;-;-;- 4549 1 1.12 120066.3 0.6800000071525574 11560 4972 16515 HBL1_DMSO_200M_050219_2,16534 HBL1_DMSO_200M_050219_2,16534,FFFDKTEEL True True FFFDKTEEL 87.303972 588.285510241985 1271733.5 16515.0 nc|ENSG00000134744|Q5TAX3|TUT4;;ENSG00000134744|ENST00000257177|TUT4 3.735985040664673 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16535 87.312 369.0 237200.0 25 0 24233.0 + 10213 FQIRNLPSL 9 114 544.3159189066655 1086.617284880131 2 544.3162109255791 MULTI CID FTMS 0 0 0 16515 114171.2109375 1.0 0 0.0 20 Unmodified _FQIRNLPSL_ ENSG00000133641|ENST00000356891|C12orf29;ENST00000547468.1_1_12:88436564-88442196:+|nuORF;ENST00000548511.5_1_12:88439351-88442196:+|nuORF;ENST00000550333.5_1_12:88429286-88442196:+|nuORF;ENST00000552121.5_1_12:88429328-88442196:+|nuORF;nc|ENSG00000133641|Q8N999-3|RLIG1 58.6788170122104 0.0268135626297836 4 SP[TP]AE{I|L}E{I|L} 9 8 43.215 0.0 0.0 3.977 0.0 0.0 131.09500319648595 0.0 131.09500319648595 0.0 19.59158326123733 0.0 0.0 0 0.4247425010840047 0.0 0.9749073637206092 0.0 SP[TP]AE{I|L}E{I|L} 3.977 - 1448 1 1.12 73479.1 1.0 11561 4972 16515 HBL1_DMSO_200M_050219_2,16535 HBL1_DMSO_200M_050219_2,16535,FQIRNLPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16537 87.316 3.3 10791000.0 25 0 1019000.0 + 35869 SVLKSLVEI 9 51 494.30818695884494 986.60182098449 2 494.3085815310478 MULTI CID FTMS 0 0 0 16536 12817106.0 0.6973106132115249 1 -0.1271820068359375 1 Unmodified _SVLKSLVEI_ ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5 34.40172386719151 0.1061884637610825 4 [VS]{I|L}K{I|L}SVE{I|L} 9 2 + 67.355 0.0 0.0 6.827 6.827 92.995 0.0 0.0 0.0 22.24301211992909 52.7512186568557 22.24301211992909 24.771212547196622 0 0.5994850021680094 2.0 0.4247425010840047 0.0 [VS]{I|L}K{I|L}SVE{I|L};{[TV]|[{I|L}S]}VK{I|L}SVE{I|L};[K{I|L}][VS]{I|L}SVE{I|L} 6.827;4.3162;3.2044 -;-;- 126 1 1.12 33844.0 1.0 11562 4973 16536 HBL1_DMSO_200M_050219_2,16537 HBL1_DMSO_200M_050219_2,16537,SVLKSLVEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16538 87.318 8.7 4794500.0 25 0 495250.0 + 3360 AYPEYLITY 9 58 566.7819198959418 1131.5492868586834 2 566.7821533083916 MULTI CID FTMS 0 0 0 16536 5692836.0 1.0 0 0.0 2 Unmodified _AYPEYLITY_ ENSG00000107854|ENST00000371627|TNKS2;ENSG00000173273|ENST00000310430|TNKS 28.486842064014134 0.1687311288560894 4 [EP]Y{I|L}{I|L} 5 4 27.033 0.0 0.0 2.3891 0.0 0.0 0.0 513.19971270426 513.19971270426 1.0473535052001317 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 + [EP]Y{I|L}{I|L} 2.3891 + + 164 1 1.12 39938.7 1.0 11563 4973 16536 HBL1_DMSO_200M_050219_2,16538 HBL1_DMSO_200M_050219_2,16538,AYPEYLITY False True AYPEYLITY 87.317584 566.782153308392 57218776.0 16536.0 ENSG00000107854|ENST00000371627|TNKS2;;ENSG00000173273|ENST00000310430|TNKS 5.571856498718262 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16539 87.319 48.0 1108500.0 25 0 171660.0 -1 ALMAAPLSL 9 65 451.75274496202985 901.4909369908596 2 451.7528869509697 MULTI CID FTMS 0 0 0 16536 1127495.5 0.0868144126821772 58 -6.309730529785156 3 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 63.835 0.0 0.0 7.081 7.081 84.518 0.0 0.0 0.0 13.208705367622429 8.384767769392738 8.384767769392738 4.771212547196626 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L};[PS]{M(Oxidation (M))|F}APS{I|L}A{I|L} 7.081;6.5518;5.6158;5.0866;4.9772;4.4718;4.0871;4.0427;4.0427;3.5134 -;-;-;-;-;-;-;-;-;- 194 1 1.12 51594.3 1.0 11564 4973 16536 HBL1_DMSO_200M_050219_2,16539 HBL1_DMSO_200M_050219_2,16539,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16540 87.321 83.0 517010.0 25 0 69137.0 + 42567 VTPPGFQLV 9 70 479.2739339707902 956.5333150083804 2 479.2740966677666 MULTI CID FTMS 0 0 0 16536 457821.5 0.1827176315032229 5 -0.63055419921875 4 Unmodified _VTPPGFQLV_ ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6 28.486842064014134 0.1687311288560894 4 {[TV]|[{I|L}S]}YY{I|L} 5 6 28.468 0.0 0.0 2.9762 0.0 0.0 0.0 314.1699447558171 314.1699447558171 11.266690026630531 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[TV]|[{I|L}S]}YY{I|L} 2.9762 - 97 1 1.12 38978.7 1.0 11565 4973 16536 HBL1_DMSO_200M_050219_2,16540 HBL1_DMSO_200M_050219_2,16540,VTPPGFQLV False True VTPPGFQLV 87.320732 479.274096667767 159330320.0 16536.0 ENSG00000196419|ENST00000360079|XRCC6;;nc|ENSG00000196419|P12956-2|XRCC6 4.498926719029744 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16541 87.322 60.0 896280.0 25 0 49701.0 + 15575 IPYLQIRSI 9 69 551.8353638959288 1101.6561748586576 2 551.8352538943291 MULTI CID FTMS 0 0 0 16536 440055.40625 0.7230187262917711 -1 0.125091552734375 5 Unmodified _IPYLQIRSI_ ENSG00000163093|ENST00000295240|BBS5 29.84058131909904 0.1515068451768857 4 {I|L}PY{I|L}Q{I|L} 6 3 74.073 0.0 0.0 6.7238 0.0 0.0 0.0 371.2067659967407 371.2067659967407 51.141303353600094 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.0 0.0 + {I|L}PY{I|L}Q{I|L} 6.7238 + + 102 + 1 1.12 48204.1 1.0 11566 4973 16536 HBL1_DMSO_200M_050219_2,16541 HBL1_DMSO_200M_050219_2,16541,IPYLQIRSI False True IPYLQIRSI 87.322232 551.835253894329 5279934.0 16536.0 ENSG00000163093|ENST00000295240|BBS5 1.5636944969495137 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16542 87.325 124.0 298160.0 25 0 27616.0 + 34839 SQFQQEFPSL 10 65 605.79119129381 1209.56782965442 2 605.7917968630791 MULTI CID FTMS 0 0 0 16536 409370.71875 0.110429918114432 4 -0.4920578002929687 6 Unmodified _SQFQQEFPSL_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 34.93206674587334 0.2110832994570416 4 {M(Oxidation (M))|F}PS{I|L} 4 6 32.696 0.0 0.0 2.7031 0.0 0.0 747.31924674602 0.0 747.31924674602 0.0 12.77433463803845 0.0 0.0 0 0.5 0.0 0.6549471895720985 0.0 + {M(Oxidation (M))|F}PS{I|L} 2.7031 + + 190 + 1 1.12 33784.7 1.0 11567 4973 16536 HBL1_DMSO_200M_050219_2,16542 HBL1_DMSO_200M_050219_2,16542,SQFQQEFPSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16543 87.326 73.0 447040.0 25 0 58139.0 + 25283 MYPDQVQLL 9 74 553.780652555794 1105.5467521783878 2 553.7815429568291 MULTI CID FTMS 0 0 0 16536 384734.9375 0.878582270083709 3 -0.37103271484375 7 Unmodified _MYPDQVQLL_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 15.847184025352805 0.4077185912009129 4 {[CP]|[EA]}[QP]{I|L}QV 7 6 20.233 0.0 0.0 1.8302 0.0 0.0 0.0 337.11643396549067 337.11643396549067 3.66537568150207 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {[CP]|[EA]}[QP]{I|L}QV 1.8302 - 74 + 1 1.12 35173.5 1.0 11568 4973 16536 HBL1_DMSO_200M_050219_2,16543 HBL1_DMSO_200M_050219_2,16543,MYPDQVQLL False True MYPDQVQLL 87.326494 553.781542956829 7292071.0 16536.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 5.4368031819661455 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16544 87.328 90.0 586730.0 25 0 94555.0 + + 32735 GTVEQIVYL 9 84 511.2824809890437 0 511.2828246951103 PEAK CID FTMS 0 0 0 16536 404813.40625 0.1006217515496833 -2 0.263916015625 8 Unmodified _SEAVGALVYL_ ENSG00000182481|ENST00000330459|KPNA2 25.399314129420983 0.2547831343944559 4 V{I|L}Q 3 -1 18.812 0.0 0.0 1.8433 0.0 0.0 294.15790523804986 383.15976892642817 677.317674164478 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V{I|L}Q 1.8433 - 133 + 1 1.12 46505.5 1.0 11569 4973 16536 HBL1_DMSO_200M_050219_2,16544 HBL1_DMSO_200M_050219_2,16544,SEAVGALVYL False False GTVEQIVYL 87.328498 511.28282469511 35831492.0 16536.0 ENSG00000182481|ENST00000330459|KPNA2 0.8783015410105387 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16545 87.342 786.0 360640.0 25 0 51685.0 -1 0 132 1180.4915654420215 3538.4528669262645 3 1181.161791980267 MULTI CID FTMS 0 0 0 16536 358806.375 0.7263146807959487 -1 0.125091552734375 9 4 G 1 -1 6.9897 0.0 0.0 0.19754 0.0 0.0 1255.4228727818338 2222.977533337603 3478.4004061194364 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19754 - 217 + 1 1.12 200363.0 1.0 11570 4973 16536 HBL1_DMSO_200M_050219_2,16545 HBL1_DMSO_200M_050219_2,16545, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16546 87.347 239.0 274020.0 25 0 32613.0 + 34826 SQFPGAITL 9 97 467.2557031428642 932.4968533525284 2 467.2556945681572 MULTI CID FTMS 0 0 0 16536 298962.1875 1.0 0 0.0 10 Unmodified _SQFPGAITL_ ENST00000263083.10_1_17:1944800-1946395:+|nuORF;ENST00000571710.5_1_17:1945525-1946395:+|nuORF;nc|ENSG00000262664|Q8WZ82|OVCA2 39.94969957227396 0.0757326808254658 4 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L} 8 2 + 41.435 0.0 0.0 4.4435 4.4435 73.208 0.0 0.0 0.0 10.571720435366656 10.172203223519537 10.172203223519537 4.13664226604736 0 1.1069758080123702 0.8239087409443188 0.3494850021680094 0.6747425010840047 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L};{[QS]|[NT]}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T{I|L};[QP]{M(Oxidation (M))|F}{[QS]|[NT]}{I|L}T{I|L};[Q{I|L}]M{[QS]|[NT]}{I|L}T{I|L};[QP]S{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T{I|L};[PG]A{M(Oxidation (M))|F}{[QS]|[NT]}{I|L}T{I|L};[PG]AS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T{I|L};[QP]{I|L}Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L};[QP]{M(Oxidation (M))|F}{I|L}{[QS]|[NT]}T{I|L};[{I|L}T][RD]{[QS]|[NT]}T{I|L} 4.4435;3.9999;3.3098;2.7981;2.6594;2.4823;2.1595;1.9679;1.645;1.4816 -;-;-;-;-;-;-;-;-;- 238 1 1.12 56081.2 1.0 11571 4973 16536 HBL1_DMSO_200M_050219_2,16546 HBL1_DMSO_200M_050219_2,16546,SQFPGAITL True True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 16547 87.352 281.0 198450.0 25 0 25335.0 + 9000 FAYDGKDYLTL 11 81 653.3220020878606 1304.629451242521 2 653.3219482302666 MULTI CID FTMS 0 0 0 16536 268378.8125 0.4104509026828425 2 -0.2598724365234375 11 Unmodified _FAYDGKDYLTL_ ENSG00000204592|ENST00000376630|HLA-E 37.07464296494664 0.257459615863268 4 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}[KG]DYA{M(Oxidation (M))|F}[{I|L}T] 11 5 + 29.363 0.0 0.0 2.2507 2.2507 65.761 0.0 0.0 0.0 2.542422786190496 -1.998777040368754 -1.998777040368754 3.0102999566398125 0 0.4247425010840047 1.2218487496163564 0.0 0.0 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}[KG]DYA{M(Oxidation (M))|F}[{I|L}T];{[YD]|[{M(Oxidation (M))|F}M]}{I|L}T[QA]YA{M(Oxidation (M))|F}[{I|L}T];{[YD]|[{M(Oxidation (M))|F}M]}{I|L}[KG]D[HM]{I|L}[{I|L}T];{[YD]|[{M(Oxidation (M))|F}M]}{I|L}T[QA][HM]{I|L}[{I|L}T];[{I|L}T]YD[QA]YA{M(Oxidation (M))|F}[{I|L}T];{[MS]|[{M(Oxidation (M))|F}A]}YDR{[DS]|[MA]|[CV]|TT}A{M(Oxidation (M))|F}[{I|L}T];{[MS]|[{M(Oxidation (M))|F}A]}YDR[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}[{I|L}T];{[YD]|[{M(Oxidation (M))|F}M]}{I|L}[KG][WY]{M(Oxidation (M))|F}[{I|L}T];{[MS]|[{M(Oxidation (M))|F}A]}YDR{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}[{I|L}T];{[MS]|[{M(Oxidation (M))|F}A]}HH[QA]YA{M(Oxidation (M))|F}[{I|L}T] 2.2507;2.0199;1.4099;1.1791;1.1586;1.1181;0.97975;0.90585;0.61403;0.49088 -;-;-;-;-;-;-;-;-;- 357 1 1.12 49721.6 1.0 11572 4973 16536 HBL1_DMSO_200M_050219_2,16547 HBL1_DMSO_200M_050219_2,16547,FAYDGKDYLTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16548 87.358 343.0 528540.0 25 0 54691.0 + 22564 LPWSNPLKV 9 166 527.3083330128565 1052.6021130925128 2 527.3084594607353 MULTI CID FTMS 0 0 0 16536 261454.046875 0.0659625090178272 -2 0.263916015625 12 Unmodified _LPWSNPLKV_ ENSG00000134077|ENST00000452837|THUMPD3 147.24064527209634 0.032628637428775 4 {I|L}PWSNP{I|L}KV 9 0 + 113.55 0.0 0.0 10.788 10.788 90.512 0.0 0.0 0.0 35.61842040897062 6.197887582883936 6.197887582883936 6.197887582883936 0 2.474907363720609 2.0 0.9876954943324544 0.9361818737241734 + + {I|L}PWSNP{I|L}KV;{I|L}PWSNP{I|L}VK;{I|L}PWSGGP{I|L}KV;{I|L}PWSGGP{I|L}VK;[{I|L}P]WSNPKV{I|L};[WP]SN{I|L}PKV{I|L};[{I|L}P]NSWPKV{I|L};[WP]{I|L}SNPKV{I|L};[{I|L}P]WSNKVP{I|L};[{I|L}P]C(Carbamidomethyl (C))N{I|L}PKV{I|L} 10.788;10.199;9.9128;9.324;8.4718;7.7714;7.5986;7.5922;7.477;7.4554 +;-;-;-;-;-;-;-;-;- + 4804 + 1 1.12 149156.3 1.0 11573 4973 16536 HBL1_DMSO_200M_050219_2,16548 HBL1_DMSO_200M_050219_2,16548,LPWSNPLKV True True LPWSNPLKV 87.358 527.308459460735 66368416.0 16536.0 ENSG00000134077|ENST00000452837|THUMPD3 7.127405007680257 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16549 87.361 123.0 583190.0 25 0 37054.0 + 22266 LPRLTPPVL 9 109 503.32679011973016 1004.6390273062603 2 503.3267394900322 MULTI CID FTMS 0 0 0 16536 248980.875 0.0169752854947588 6 -0.7476959228515625 13 Unmodified _LPRLTPPVL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 29.081581746732265 0.1611639662936252 4 [{I|L}P][{I|L}T]RPPV{I|L} 9 2 + 44.632 0.0 0.0 4.4426 4.4426 84.334 0.0 0.0 0.0 4.594917664159439 23.5256843593644 4.594917664159439 44.63160941989898 0 0.3807196863200844 0.9208187539523752 0.2742275032520141 0.0 [{I|L}P][{I|L}T]RPPV{I|L} 4.4426 - 347 1 1.12 57765.0 1.0 11574 4973 16536 HBL1_DMSO_200M_050219_2,16549 HBL1_DMSO_200M_050219_2,16549,LPRLTPPVL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16550 87.365 257.0 230160.0 25 0 34496.0 + 42750 VVFDCKFIET 10 82 600.8024900592461 1199.590427185292 2 600.8025390505791 MULTI CID FTMS 0 0 0 16536 243230.546875 1.0 0 0.0 14 Unmodified _VVFDCKFIET_ ENSG00000088320|ENST00000201979|REM1;ENSG00000164949|ENST00000297596|GEM;ENSG00000166592|ENST00000299759|RRAD;ENST00000567791.1_1_16:66955609-66957656:-|nuORF 38.61474834105838 0.1721950110283317 4 VV{M(Oxidation (M))|F}T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}DC 9 6 69.875 0.0 0.0 5.8249 0.0 0.0 0.0 125.07248865299064 125.07248865299064 52.52874091797111 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.1549471895720984 0.0 VV{M(Oxidation (M))|F}T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}DC 5.8249 - 328 + 1 1.12 47000.6 1.0 11575 4973 16536 HBL1_DMSO_200M_050219_2,16550 HBL1_DMSO_200M_050219_2,16550,VVFDCKFIET False True VVFDCKFIET 87.365313 600.802539050579 2014492.125 16536.0 ENSG00000088320|ENST00000201979|REM1;;ENSG00000164949|ENST00000297596|GEM;;ENST00000567791.1_1_16:66955609-66957656:-|nuORF;;ENSG00000166592|ENST00000299759|RRAD 5.446314175923665 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16551 87.369 92.0 169790.0 25 0 14652.0 28751 PVYYQKLK 8 40 519.8027344015265 1037.590915869853 2 519.8030883669853 MULTI CID FTMS 0 0 0 16536 218681.78125 0.935839115447092 1 -0.1271820068359375 15 Unmodified _PVYYQKLK_ ENSG00000013503|ENST00000228347|POLR3B;nc|ENSG00000013503|Q9NW08-2|POLR3B 0.7936320650641473 0.8195151834710337 4 {I|L} 1 7 2.4743 0.0 0.0 0.23846 0.0 0.0 839.4172230981718 82.06691156558827 921.48413466376 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.23846 + + 1 + 1 1.12 21315.6 1.0 11576 4973 16536 HBL1_DMSO_200M_050219_2,16551 HBL1_DMSO_200M_050219_2,16551,PVYYQKLK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16552 87.382 800.0 191020.0 25 0 22778.0 + 29421 QLESHDVHLS 10 154 582.7854289844591 1163.5563050357182 2 582.7856323122978 MULTI CID FTMS 0 0 0 16536 193941.6875 0.0291052352800285 5 -0.63055419921875 16 Unmodified _QLESHDVHLS_ REV__ENSG00000184163|ENST00000330388|C1QTNF12 12.240655878213236 0.6421556946785427 4 {I|L}{I|L}DQE{I|L} 6 -1 51.443 0.0 0.0 4.4212 0.0 0.0 0.0 449.15348986686496 449.15348986686496 25.82007123194992 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.6203715150305281 {I|L}{I|L}DQE{I|L} 4.4212 - 1147 1 1.12 116616.1 0.6899999976158142 11577 4973 16536 HBL1_DMSO_200M_050219_2,16552 HBL1_DMSO_200M_050219_2,16552,QLESHDVHLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16553 87.396 800.0 162520.0 25 0 21844.0 -1 0 88 1185.815710835025 3554.425303105274 3 1186.150561511517 MULTI CID FTMS 0 0 0 16536 183160.53125 1.0 0 0.0 17 4 E 1 -1 6.9897 0.0 0.0 0.19665 0.0 0.0 2898.1969228335934 524.1634005182249 3422.3603233518184 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19665 - 93 + 1 1.12 96709.4 0.5299999713897705 11578 4973 16536 HBL1_DMSO_200M_050219_2,16553 HBL1_DMSO_200M_050219_2,16553, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16554 87.41 800.0 128640.0 25 0 11034.0 + 15721 IQYIPTELDQV 11 136 659.8482513120434 1317.6819496908868 2 659.8476440310478 MULTI CID FTMS 0 0 0 16536 170686.4375 0.033529537803678 4 -0.4920578002929687 18 Unmodified _IQYIPTELDQV_ ENSG00000149100|ENST00000531120|EIF3M 47.594388314883695 0.1309523012099263 4 [TP]E{I|L}DQV 7 4 41.309 0.0 0.0 3.1349 0.0 0.0 0.0 532.2837332834714 532.2837332834714 10.946757120868256 0.0 0.0 0.0 0 0.25 0.744727494896694 1.2104093769761874 0.3807196863200844 + [TP]E{I|L}DQV 3.1349 + + 1545 1 1.12 81993.8 0.6399999856948853 11579 4973 16536 HBL1_DMSO_200M_050219_2,16554 HBL1_DMSO_200M_050219_2,16554,IQYIPTELDQV False True IQYIPTELDQV 87.410056 659.847644031048 119586144.0 16536.0 ENSG00000149100|ENST00000531120|EIF3M 5.717640240987142 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16555 87.425 800.0 194270.0 25 0 26197.0 1906 ALYSDRSI 8 129 462.744003502894 0 462.7446166872978 PEAK CID FTMS 0 0 0 16536 112860.859375 0.0431048424404159 32 -3.4512176513671875 19 Unmodified _ALYSDRSI_ ENSG00000114770|ENST00000334444|ABCC5;ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5 19.438996006549623 0.4285751805470146 4 P{I|L} 2 7 15.217 0.0 0.0 1.6477 0.0 0.0 184.1205108615773 526.1906832330686 710.311194094646 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L} 1.6477 - 76 + 1 1.12 121259.4 0.4900000095367431 11580 4973 16536 HBL1_DMSO_200M_050219_2,16555 HBL1_DMSO_200M_050219_2,16555,ALYSDRSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16556 87.439 800.0 72297.0 25 0 13935.0 -1 0 59 1190.804987944629 3569.393134434087 3 1191.808276355267 MULTI CID FTMS 0 0 0 16536 108750.8046875 0.864199127388838 -1 0.125091552734375 20 4 YE 2 -1 6.1979 0.0 0.0 0.17364 0.0 0.0 2859.241780529593 415.0236858379559 3274.265466367549 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YE 0.17364 - 14 + 1 1.12 51552.3 0.3899999856948852 11581 4973 16536 HBL1_DMSO_200M_050219_2,16556 HBL1_DMSO_200M_050219_2,16556, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16558 87.444 15.0 11349000.0 25 0 3146100.0 -1 0 52 1173.1679619706183 3516.482056512056 3 1173.503466784954 MULTI CID FTMS 0 0 0 16557 15242656.0 1.0 0 0.0 1 4 YGYW 4 -1 17.423 0.0 0.0 0.49546 0.0 0.0 1781.6256855177182 1162.622758575722 2944.2484440934404 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YGYW 0.49546 - 50 + 1 1.12 143880.6 1.0 11582 4974 16557 HBL1_DMSO_200M_050219_2,16558 HBL1_DMSO_200M_050219_2,16558, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16559 87.446 109.0 691060.0 25 0 113730.0 + 30827 RIINGIIISV 10 74 549.3559890749159 1096.6974252166317 2 549.3562499880791 MULTI CID FTMS 0 0 0 16557 513093.03125 0.4895106711031062 1 -0.1326904296875 2 Unmodified _RIINGIIISV_ chr12:110661448-110688625|40|10.35|0.61|4.09|-|ENST00000439744|HVCN1,HVCN1;ENSG00000122986|ENST00000242607|HVCN1;nc|ENSG00000122986|Q96D96-2|HVCN1;nc|ENSG00000122986|Q96D96-3|HVCN1;nc|ENSG00000122986|Q96D96-4|HVCN1 29.081581746732265 0.3152867722954398 4 {I|L}{I|L}{I|L}W 4 7 38.928 0.0 0.0 3.5496 0.0 0.0 553.3367070753628 0.0 553.3367070753628 0.0 13.381681563112409 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L}{I|L}{I|L}W 3.5496 - 94 1 1.12 62606.8 1.0 11583 4974 16557 HBL1_DMSO_200M_050219_2,16559 HBL1_DMSO_200M_050219_2,16559,RIINGIIISV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16560 87.447 40.0 1729100.0 25 0 118430.0 + 24783 MPIIWLFAL 9 75 552.3179498314288 1102.6213467296575 2 552.3180419802666 MULTI CID FTMS 0 0 0 16557 747610.0 0.4783111415223187 -2 0.2522735595703125 3 Unmodified _MPIIWLFAL_ REV__nc|ENSG00000138347|Q86TC9-2|MYPN 28.17323086031832 0.1727213568982648 4 MP{I|L}{I|L}T[HS]{I|L} 8 -1 63.81 0.0 0.0 5.7871 0.0 0.0 0.0 207.11448084049064 207.11448084049064 24.16870187156568 0.0 0.0 0.0 0 0.7887254899964358 1.3979400086720375 0.3807196863200844 0.0 MP{I|L}{I|L}T[HS]{I|L} 5.7871 - 116 + 1 1.12 59745.3 1.0 11584 4974 16557 HBL1_DMSO_200M_050219_2,16560 HBL1_DMSO_200M_050219_2,16560,MPIIWLFAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16561 87.449 109.0 839020.0 25 0 113310.0 + 22732 LQIPEKLEL 9 92 541.8264970253581 1081.638441117516 2 541.8260986208916 MULTI CID FTMS 0 0 0 16557 415330.78125 0.3957324766117215 -1 0.1271820068359375 4 Unmodified _LQIPEKLEL_ ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 32.78568957990786 0.1150597335874693 4 [Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}E 7 4 60.934 0.0 0.0 5.6335 0.0 0.0 0.0 222.1257418268188 222.1257418268188 38.23145724778165 0.0 0.0 0.0 0 0.8494850021680094 1.2218487496163564 1.1989700043360187 0.0 [Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}E 5.6335 - 469 + 1 1.12 73258.9 1.0 11585 4974 16557 HBL1_DMSO_200M_050219_2,16561 HBL1_DMSO_200M_050219_2,16561,LQIPEKLEL True True LQIPEKLEL 87.449423 541.826098620892 6937646.5 16557.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B;;nc|ENSG00000156970|O60566-2|BUB1B 3.4985355536142984 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16562 87.452 127.0 506140.0 25 0 36546.0 + 1186 AIAPIIAAV 9 83 419.77361318856777 837.5326734439356 2 419.7735168337822 MULTI CID FTMS 0 0 0 16557 415411.125 0.7048865942886243 -1 0.1271820068359375 5 Unmodified _AIAPIIAAV_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 56.04830969593885 0.0282699710924866 4 [{I|L}A]P{I|L}AA{I|L}AV 9 3 + 57.273 0.0 0.0 6.8383 6.8383 75.297 0.0 0.0 0.0 0.5115252244738144 10.330145895351848 0.5115252244738144 0.1230450566754512 0 0.7429928190999391 1.6989700043360187 0.0 0.0 [{I|L}A]P{I|L}AA{I|L}AV;[{I|L}A]P{I|L}A{I|L}AAV;[{I|L}P]{I|L}AAA{I|L}AV;[{I|L}P]{I|L}AA{I|L}AAV;[{I|L}P]A{I|L}AA{I|L}AV;[{I|L}P]A{I|L}A{I|L}AAV;[{I|L}A]PA{I|L}A{I|L}AV;[{I|L}A]PA{I|L}{I|L}AAV;[{I|L}A]AP{I|L}A{I|L}AV;[{I|L}A]AP{I|L}{I|L}AAV 6.8383;6.8236;6.7772;6.7625;6.4178;6.4031;6.2686;6.2539;6.0584;6.0437 -;-;-;-;-;-;-;-;-;+ + 431 1 1.12 56609.6 1.0 11586 4974 16557 HBL1_DMSO_200M_050219_2,16562 HBL1_DMSO_200M_050219_2,16562,AIAPIIAAV True True AIAPIIAAV 87.452014 419.773516833782 5367097.0 16557.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-2|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2 4.101976076761882 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16563 87.455 128.0 367590.0 25 0 68828.0 + 30276 QYPDFNNYL 9 87 587.2645048871354 1172.5144568410708 2 587.2644531130791 MULTI CID FTMS 0 0 0 16557 366912.71875 0.8656711586989607 -1 0.1271820068359375 6 Unmodified _QYPDFNNYL_ ENSG00000083312|ENST00000337273|TNPO1;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000083312|Q92973-3|TNPO1 21.74664581756881 0.2544899275067181 4 [DP]{M(Oxidation (M))|F}NN 5 4 20.322 0.0 0.0 1.7332 0.0 0.0 0.0 582.2562796563101 582.2562796563101 7.22332374560656 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.4247425010840047 + [DP]{M(Oxidation (M))|F}NN 1.7332 + + 241 1 1.12 42190.4 1.0 11587 4974 16557 HBL1_DMSO_200M_050219_2,16563 HBL1_DMSO_200M_050219_2,16563,QYPDFNNYL False True QYPDFNNYL 87.454639 587.264453113079 3683964.75 16557.0 nc|ENSG00000083312|Q92973-2|TNPO1;;ENSG00000083312|ENST00000337273|TNPO1;;nc|ENSG00000083312|Q92973-3|TNPO1 6.611724058787028 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16564 87.459 235.0 465490.0 25 0 68878.0 + 18662 HALPIPVI 8 83 430.27389876761663 858.5332446020333 2 430.2739745974541 MULTI CID FTMS 0 0 0 16557 262129.65625 0.5623595969640094 -1 0.1271820068359375 7 Unmodified _LAHPLPVL_ ENSG00000136628|ENST00000366923|EPRS1 41.81723621529253 0.2038889569391319 4 [{I|L}A]HP{I|L} 5 3 29.239 0.0 0.0 3.4056 0.0 0.0 0.0 324.1921890856016 324.1921890856016 15.259169494624132 0.0 0.0 0.0 0 0.3252574989159953 1.2218487496163564 0.0 0.0 + [{I|L}A]HP{I|L} 3.4056 + + 60 1 1.12 89303.0 1.0 11588 4974 16557 HBL1_DMSO_200M_050219_2,16564 HBL1_DMSO_200M_050219_2,16564,LAHPLPVL False True HALPIPVI 87.459029 430.273974597454 4670328.5 16557.0 ENSG00000136628|ENST00000366923|EPRS1 5.567708015441895 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16565 87.462 150.0 588640.0 25 0 60918.0 + 15558 IPYGMRFI 8 102 498.7713656568809 995.5281783805618 2 498.7708618044853 MULTI CID FTMS 0 0 0 16557 200292.25 0.7384576955762718 -3 0.3910980224609375 8 Unmodified _IPYGMRFI_ ENSG00000140575|ENST00000268182|IQGAP1 30.22481116460888 0.4082965392918993 4 {I|L}PYGM 5 3 50.974 0.0 0.0 5.1203 0.0 0.0 0.0 431.2413424127563 431.2413424127563 34.776296993281406 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}PYGM 5.1203 + + 250 + 1 1.12 73495.4 1.0 11589 4974 16557 HBL1_DMSO_200M_050219_2,16565 HBL1_DMSO_200M_050219_2,16565,IPYGMRFI False True IPYGMRFI 87.462004 498.770861804485 4403548.5 16557.0 ENSG00000140575|ENST00000268182|IQGAP1 3.595627784729004 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16566 87.467 262.0 312250.0 25 0 32121.0 23563 LTLWDRAV 8 108 487.2771687764737 972.5397846197476 2 487.2773315310478 MULTI CID FTMS 0 0 0 16557 201110.8125 0.1719586607440595 -5 0.59423828125 9 Unmodified _LTLWDRAV_ nc|ENSG00000215811|A8MVZ5|BTNL10P 24.67388899826682 0.525179942228231 4 [{I|L}T]G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N 8 5 36.831 0.0 0.0 3.7871 0.0 0.0 0.0 114.05800906726624 114.05800906726624 21.917504964012487 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.5010912013506126 0.0 [{I|L}T]G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N 3.7871 - 452 1 1.12 67220.4 1.0 11590 4974 16557 HBL1_DMSO_200M_050219_2,16566 HBL1_DMSO_200M_050219_2,16566,LTLWDRAV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 16567 87.47 162.0 284790.0 25 0 50216.0 + 17346 KLYDGFQYL 9 71 573.7960966738806 1145.577640414561 2 573.7968627810478 MULTI CID FTMS 0 0 0 16557 204677.75 1.0 0 0.0 10 Unmodified _KLYDGFQYL_ ENSG00000143393|ENST00000368873|PI4KB;nc|ENSG00000143393|Q9UBF8-2|PI4KB;nc|ENSG00000143393|Q9UBF8-3|PI4KB 22.736283301280096 0.2418982879461534 4 [{I|L}T][QA]Y{M(Oxidation (M))|F}QY{I|L} 9 4 + 41.941 0.0 0.0 3.6611 3.6611 74.963 0.0 0.0 0.0 2.243012119929091 26.45628410553762 2.243012119929091 8.450980400142562 0 0.7742275032520141 0.0 0.3807196863200844 0.4247425010840047 [{I|L}T][QA]Y{M(Oxidation (M))|F}QY{I|L};[DV][KA]Y{M(Oxidation (M))|F}QY{I|L};[{I|L}T][QA]Y{M(Oxidation (M))|F}[AG]Y{I|L};[DV][KA]Y{M(Oxidation (M))|F}[AG]Y{I|L} 3.6611;2.9234;2.8573;2.1196 -;-;-;- 133 1 1.12 43371.1 1.0 11591 4974 16557 HBL1_DMSO_200M_050219_2,16567 HBL1_DMSO_200M_050219_2,16567,KLYDGFQYL False True KLYDGFQYL 87.470037 573.796862781048 1950530.5 16557.0 nc|ENSG00000143393|Q9UBF8-2|PI4KB;;ENSG00000143393|ENST00000368873|PI4KB;;nc|ENSG00000143393|Q9UBF8-3|PI4KB 3.4453365008036294 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16568 87.474 216.0 148240.0 25 0 18521.0 -1 0 47 663.0049953771465 1985.99315673164 3 663.3396484255791 MULTI CID FTMS 0 0 0 16557 196539.25 1.0 0 0.0 11 4 P{I|L}VV{I|L}W 6 -1 32.695 0.0 0.0 1.6463 0.0 0.0 1260.5485160501205 0.0 1260.5485160501205 0.0 19.97547537623447 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L}VV{I|L}W 1.6463 - 102 + 1 1.12 33113.0 1.0 11592 4974 16557 HBL1_DMSO_200M_050219_2,16568 HBL1_DMSO_200M_050219_2,16568, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16569 87.48 344.0 203420.0 25 0 16548.0 + -1 YPFSSEQKWMAV 12 109 736.8475521813505 1471.6805514295008 2 737.3488036990166 MULTI CID FTMS 0 0 0 16557 177749.109375 0.710853555935257 1 -0.1326904296875 12 2 Carbamidomethyl (C),2 Oxidation (M) _M(Oxidation (M))LKM(Oxidation (M))C(Carbamidomethyl (C))IRC(Carbamidomethyl (C))LCL_ nc|ENSG00000017260|P98194-7|ATP2C1;nc|ENSG00000017260|P98194-4|ATP2C1;ENSG00000017260|ENST00000510168|ATP2C1;nc|ENSG00000017260|P98194-2|ATP2C1;nc|ENSG00000017260|P98194-9|ATP2C1;nc|ENSG00000017260|P98194-3|ATP2C1;nc|ENSG00000017260|P98194-6|ATP2C1;nc|ENSG00000017260|P98194-5|ATP2C1;nc|ENSG00000017260|P98194-8|ATP2C1 10.073929032068715 0.8255972128077141 4 [EP]Y{I|L}AYCKP{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 12 -1 + 69.065 0.0 0.0 4.6929 4.6929 69.857 0.0 0.0 0.0 3.1472289590879683 3.1472289590879683 3.1472289590879683 1.7609125905568137 0 0.3494850021680094 0.8860566476931632 0.2887254899964357 0.0 [EP]Y{I|L}AYCKP{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[EP]YA{I|L}YCKP{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}AYCKP{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}AYCKP{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}AYCKW{[WN]|[YH]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EA{I|L}YCKP{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}PKCYAAENAV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}A{I|L}YCKP{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EA{I|L}YCKW{[WN]|[YH]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}PKCYPSSNAV 4.6929;4.5733;4.4791;4.3764;4.3696;4.3594;4.2815;4.2568;4.2499;4.1784 -;-;-;-;-;-;-;-;-;- 5680 1 1.12 54301.6 1.0 11593 4974 16557 HBL1_DMSO_200M_050219_2,16569 HBL1_DMSO_200M_050219_2,16569,MLKMCIRCLCL False False YPFSSEQKWMAV 87.480387 737.348803699017 1980446.125 16557.0 nc|ENSG00000017260|P98194-7|ATP2C1;;nc|ENSG00000017260|P98194-4|ATP2C1;;ENSG00000017260|ENST00000510168|ATP2C1;;nc|ENSG00000017260|P98194-2|ATP2C1;;nc|ENSG00000017260|P98194-9|ATP2C1;;nc|ENSG00000017260|P98194-3|ATP2C1;;nc|ENSG00000017260|P98194-6|ATP2C1;;nc|ENSG00000017260|P98194-5|ATP2C1;;nc|ENSG00000017260|P98194-8|ATP2C1 0.1562152902285258 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16570 87.484 173.0 553890.0 25 0 42821.0 9560 FLIEHFSL 8 123 503.2739193277156 1004.5332857222312 2 503.2741882205009 MULTI CID FTMS 0 0 0 16557 181559.03125 0.963935353709646 -1 0.1271820068359375 13 Unmodified _FLIEHFSL_ ENST00000551414.1_1_14:31762513-31765297:-|nuORF 26.34127834903884 0.4900704351052977 4 [{I|L}P][{I|L}T]RPPV 8 6 31.603 0.0 0.0 3.1461 0.0 0.0 0.0 127.96386368537492 127.96386368537492 1.068687850691184 0.0 0.0 0.0 0 0.0 0.958607314841775 1.066901560044258 0.0 [{I|L}P][{I|L}T]RPPV 3.1461 - 264 1 1.12 80751.7 1.0 11594 4974 16557 HBL1_DMSO_200M_050219_2,16570 HBL1_DMSO_200M_050219_2,16570,FLIEHFSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16571 87.498 800.0 134120.0 25 0 13083.0 -1 0 99 886.1179524678879 3540.4427040051514 4 886.3697997927666 MULTI CID FTMS 0 0 0 16557 174659.0625 1.0 0 0.0 14 4 E 1 -1 7.232 0.0 0.0 0.20427 0.0 0.0 3022.308900014324 386.0681005593148 3408.3770005736387 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 E 0.20427 - 88 + 1 1.12 87907.2 0.7200000286102295 11595 4974 16557 HBL1_DMSO_200M_050219_2,16571 HBL1_DMSO_200M_050219_2,16571, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16572 87.511 800.0 318280.0 25 0 27717.0 + 6707 EDAEEEMGTF 10 227 579.2177439036019 1156.4209348740037 2 579.2189208865166 MULTI CID FTMS 0 0 0 16557 124231.625 0.6638466821709594 -1 0.1271820068359375 15 Unmodified _EDAEEEMGTF_ ENSG00000204120|ENST00000373563|GIGYF2;nc|ENSG00000204120|Q6Y7W6-3|GIGYF2;nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;nc|ENSG00000204120|Q6Y7W6-5|GIGYF2 10.073929032068715 0.6785112666868882 4 [{I|L}P]E{M(Oxidation (M))|F}ED{M(Oxidation (M))|F} 7 7 38.452 0.0 0.0 3.3251 0.0 0.0 0.0 276.0136603881637 276.0136603881637 15.506528973229052 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.7059771852360797 0.0 [{I|L}P]E{M(Oxidation (M))|F}ED{M(Oxidation (M))|F} 3.3251 - 2312 1 1.12 191324.9 0.6100000143051147 11596 4974 16557 HBL1_DMSO_200M_050219_2,16572 HBL1_DMSO_200M_050219_2,16572,EDAEEEMGTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16573 87.526 800.0 196830.0 25 0 18090.0 + 36444 SYYPAENLIEY 11 148 681.3164915835314 1360.618430233863 2 681.3168212771416 MULTI CID FTMS 0 0 0 16557 111265.9375 0.448664478732538 -2 0.2522735595703125 16 Unmodified _SYYPAENLIEY_ ENSG00000130024|ENST00000339209|PHF10;nc|ENSG00000130024|Q8WUB8-2|PHF10;nc|ENSG00000130024|Q8WUB8-3|PHF10 72.96794272382148 0.0238034416328542 4 [PA]EN{I|L}{I|L}EYE{[{M(Oxidation (M))|F}H]|[RQ]} 11 6 + 53.07 0.0 0.0 3.9004 3.9004 75.167 0.0 0.0 0.0 7.712009567584509 7.367585652254185 7.367585652254185 7.712009567584509 0 0.0 0.8538719643217619 0.25 1.2302046884880935 [PA]EN{I|L}{I|L}EYE{[{M(Oxidation (M))|F}H]|[RQ]};{[QN]|[E{I|L}]|[KN]}N[PA]{I|L}EYE{[{M(Oxidation (M))|F}H]|[RQ]};[PA]E{I|L}N{I|L}EYE{[{M(Oxidation (M))|F}H]|[RQ]};[PA]EN{I|L}{I|L}YEE{[{M(Oxidation (M))|F}H]|[RQ]};{[QV]|[N{I|L}]|[RA]|[KV]}E[PA]{I|L}EYE{[{M(Oxidation (M))|F}H]|[RQ]};{[QN]|[E{I|L}]|[KN]}N{I|L}[PA]EYE{[{M(Oxidation (M))|F}H]|[RQ]};[PA]EN{I|L}E{I|L}YE{[{M(Oxidation (M))|F}H]|[RQ]};[PA]EN{I|L}Y{I|L}EE{[{M(Oxidation (M))|F}H]|[RQ]};{[QN]|[E{I|L}]|[KN]}[PA]N{I|L}EYE{[{M(Oxidation (M))|F}H]|[RQ]};{[QN]|[E{I|L}]|[KN]}GG[PA]{I|L}EYE{[{M(Oxidation (M))|F}H]|[RQ]} 3.9004;3.3336;3.1072;3.1069;2.9901;2.9726;2.8604;2.8322;2.6789;2.6627 -;-;-;-;-;-;-;-;-;- 6057 1 1.12 118030.1 0.5899999737739563 11597 4974 16557 HBL1_DMSO_200M_050219_2,16573 HBL1_DMSO_200M_050219_2,16573,SYYPAENLIEY True True SYYPAENLIEY 87.526439 681.316821277142 7187242.0 16557.0 ENSG00000130024|ENST00000339209|PHF10;;nc|ENSG00000130024|Q8WUB8-2|PHF10;;nc|ENSG00000130024|Q8WUB8-3|PHF10 6.549960613250732 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16574 87.54 800.0 125510.0 25 0 14312.0 -1 0 102 657.6730375436597 1969.997283231179 3 658.0078002810478 MULTI CID FTMS 0 0 0 16557 103180.4296875 0.6738735977948006 4 -0.5033721923828125 17 4 [{I|L}T][{I|L}P]QT{I|L}GS 9 -1 40.123 0.0 0.0 2.0367 0.0 0.0 0.0 1056.496128714561 1056.496128714561 16.06517002732248 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 [{I|L}T][{I|L}P]QT{I|L}GS 2.0367 - 740 + 1 1.12 82774.5 0.6600000262260437 11598 4974 16557 HBL1_DMSO_200M_050219_2,16574 HBL1_DMSO_200M_050219_2,16574, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16575 87.55 546.0 232820.0 25 0 23880.0 1750 ALQQLGHPDL 10 125 546.2980792061045 1090.5816054790089 2 546.2970458865166 MULTI CID FTMS 0 0 0 16557 107895.0546875 0.9234690868542852 3 -0.3648757934570312 18 Unmodified _ALQQLGHPDL_ ENST00000390551.6_1_14:106237055-106237666:-|nuORF 29.081581746732265 0.3152867722954398 4 [{M(Oxidation (M))|F}V]{I|L}P[YQ]PEV 9 8 + 39.484 0.0 0.0 3.6205 3.6205 63.01 0.0 0.0 0.0 1.477401846915939 4.259687322722819 1.477401846915939 0.2287874528033739 0 0.8807196863200843 0.8239087409443188 0.75 0.0 [{M(Oxidation (M))|F}V]{I|L}P[YQ]PEV;[{M(Oxidation (M))|F}V]P{I|L}[YQ]PEV;[{M(Oxidation (M))|F}V]{I|L}[{I|L}A]{[CT]|[{M(Oxidation (M))|F}G]}PEV;[{M(Oxidation (M))|F}V]PPQY{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}P[YQ]PD{I|L};[{M(Oxidation (M))|F}V]P{I|L}[YQ]PD{I|L};[{M(Oxidation (M))|F}V]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}A{I|L}PEV;[{M(Oxidation (M))|F}V]P[YG]A{I|L}PEV;[{M(Oxidation (M))|F}V]{I|L}[{I|L}A]{[CT]|[{M(Oxidation (M))|F}G]}PD{I|L};[{M(Oxidation (M))|F}V]PPQY{I|L}D{I|L} 3.6205;3.5995;3.4393;3.2743;3.2299;3.2089;3.1802;3.1592;3.0487;2.8838 -;-;-;-;-;-;-;-;-;- 944 + 1 1.12 111865.0 1.0 11599 4974 16557 HBL1_DMSO_200M_050219_2,16575 HBL1_DMSO_200M_050219_2,16575,ALQQLGHPDL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16576 87.565 800.0 113340.0 25 0 4249.6 -1 0 118 1066.5047927952744 2130.995032657349 2 1067.000903308392 MULTI CID FTMS 0 0 0 16557 101038.6015625 0.2959770238576923 7 -0.9029693603515624 19 4 [NP]D{I|L}{I|L}TA 7 -1 29.028 0.0 0.0 1.3622 0.0 0.0 0.0 1403.597707050483 1403.597707050483 12.48606012441968 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 [NP]D{I|L}{I|L}TA 1.3622 - 3379 1 1.12 64134.3 0.6200000047683716 11600 4974 16557 HBL1_DMSO_200M_050219_2,16576 HBL1_DMSO_200M_050219_2,16576, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16577 87.572 379.0 530160.0 25 0 68416.0 + + -1 LPYRDIIGL 9 147 530.2557371220856 1058.4969213109712 2 530.2553588747978 MULTI CID FTMS 0 0 0 16557 106004.0390625 0.4606562974965805 -1 0.1271820068359375 20 2 Oxidation (M) _YM(Oxidation (M))KM(Oxidation (M))WVGI_ ENSG00000100583|ENST00000216471|SAMD15 20.871210003555333 0.6025813472596342 4 {I|L}Y[{M(Oxidation (M))|F}E][DP]Y{I|L} 8 -1 + 37.45 0.0 0.0 3.538 3.538 78.167 0.0 0.0 0.0 14.97566695774944 2.26280941356464 2.26280941356464 11.973439829094673 0 0.805462187404089 0.7695510786217261 0.805462187404089 0.0 {I|L}Y[{M(Oxidation (M))|F}E][DP]Y{I|L};{[QN]|[E{I|L}]|[KN]}MYEVY{I|L};{I|L}Y[{M(Oxidation (M))|F}E][YE]PV;{[QN]|[E{I|L}]|[KN]}[YT]EEY{I|L};{[SA]|[TG]}{[QS]|[NT]}YEVY{I|L};{I|L}[WD]D{[{M(Oxidation (M))|F}H]|[RQ]}KV;{[QN]|[E{I|L}]|[KN]}[YT]W[YK]G;{[QN]|[E{I|L}]|[KN]}MYGV[YK]G;{[QN]|[E{I|L}]|[KN]}MYGV[YQ]G;{[QN]|[E{I|L}]|[KN]}MYR[YK]G 3.538;2.4069;1.8534;1.7189;1.1859;0.7128;0.40865;0.33964;0.33964;0.17838 -;-;-;-;-;-;-;-;-;- 987 + 1 1.12 159986.5 1.0 11601 4974 16557 HBL1_DMSO_200M_050219_2,16577 HBL1_DMSO_200M_050219_2,16577,YMKMWVGI False False LPYRDIIGL 87.571733 530.255358874798 0.0 16557.0 ENSG00000100583|ENST00000216471|SAMD15 2.448490018645922 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16579 87.576 12.0 3468700.0 25 0 387230.0 + 31519 RQIDQFLVV 9 61 559.322218087941 1116.629883242682 2 559.3224365115166 MULTI CID FTMS 0 0 0 16578 2735678.75 0.5383313938861317 1 -0.1111602783203125 1 Unmodified _RQIDQFLVV_ ENSG00000057935|ENST00000405094|MTA3;ENSG00000149480|ENST00000278823|MTA2;ENST00000531261.1_1_11:62365080-62365595:-|nuORF;nc|ENSG00000057935|Q9BTC8-2|MTA3;nc|ENSG00000149480|O94776-2|MTA2 8.155526934196011 0.6299788542272896 4 Q{M(Oxidation (M))|F}{I|L}VV 5 4 27.957 0.0 0.0 2.5037 0.0 0.0 512.27153212715 0.0 512.27153212715 0.0 14.769094036856664 0.0 0.0 0 0.5738194166937225 0.0 0.0 0.0 + Q{M(Oxidation (M))|F}{I|L}VV 2.5037 + + 32 1 1.12 39107.0 1.0 11602 4975 16578 HBL1_DMSO_200M_050219_2,16579 HBL1_DMSO_200M_050219_2,16579,RQIDQFLVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16580 87.577 37.0 1450900.0 25 0 142560.0 19666 LGKSPGKTQL 10 79 514.8089850336797 1027.6034171341594 2 514.8090087771416 MULTI CID FTMS 0 0 0 16578 1244944.375 0.2907442907647547 2 -0.2321853637695312 2 Unmodified _LGKSPGKTQL_ ENSG00000168813|ENST00000355898|ZNF507;ENST00000586664.1_1_19:32873361-32873986:+|nuORF 27.628801355627647 0.3479284626772844 4 {[VA]|[{I|L}G]}[RD]{I|L}{I|L}TQ{I|L} 9 5 + 57.814 0.0 0.0 5.6261 5.6261 84.148 0.0 0.0 0.0 12.21848749616356 14.973024840566469 12.21848749616356 9.208187539523747 0 0.7742275032520141 1.6989700043360187 0.5 0.0 {[VA]|[{I|L}G]}[RD]{I|L}{I|L}TQ{I|L};{[VA]|[{I|L}G]}[RD]{I|L}{I|L}T[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[QA]{I|L}{I|L}TQ{I|L};{[QN]|[E{I|L}]|[KN]}RR{I|L}TQ{I|L};{[VA]|[{I|L}G]}[RD]{I|L}{I|L}G[TA]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]{I|L}{I|L}TQ{I|L};{[QN]|[E{I|L}]|[KN]}[QA]{I|L}{I|L}T[AG]{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L}{[VA]|[{I|L}G]}G[VP]{I|L};{[VA]|[{I|L}G]}[RD]{I|L}[WR]{I|L};{[QN]|[E{I|L}]|[KN]}RR{I|L}T[AG]{I|L} 5.6261;4.73;4.4371;3.8067;3.732;3.646;3.541;3.3696;2.9302;2.9053 -;-;-;-;-;-;-;-;-;- 173 1 1.12 47856.9 1.0 11603 4975 16578 HBL1_DMSO_200M_050219_2,16580 HBL1_DMSO_200M_050219_2,16580,LGKSPGKTQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16581 87.579 19.0 2681400.0 25 0 188150.0 + + 16529 SLIRNLEQL 9 79 542.8205584574885 1083.6265639817768 2 543.3196899294853 MULTI CID FTMS 0 0 0 16578 2303241.0 0.9706652090652246 -1 0.1326904296875 3 Unmodified _KATVTPVAGQL_ ENST00000593854.5_1_19:7709481-7711320:+|nuORF;nc|ENSG00000076944|Q15833-2|STXBP2;ENSG00000076944|ENST00000221283|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2;ENST00000601061.1_1_19:7710099-7712134:+|nuORF 15.248480904072842 0.7179608125786238 4 [KA]ST{I|L}N[{I|L}P]Q{I|L} 10 -1 + 35.64 0.0 0.0 3.289 3.289 74.798 0.0 0.0 0.0 19.83024731214847 2.9710624853235146 2.9710624853235146 9.164539485499253 0 0.0 0.0 0.0 0.8807196863200843 [KA]ST{I|L}N[{I|L}P]Q{I|L};[KA]ST{I|L}GG[{I|L}P]Q{I|L};[KA]{I|L}{[MG]|[TS]}N[{I|L}P]Q{I|L};[KA]ST{I|L}N[{I|L}P][AG]{I|L};{[TV]|[{I|L}S]}[R{I|L}]N{I|L}[NG]VV;[KA]SE[KA][{I|L}P]Q{I|L};[KA]{I|L}C[KA][{I|L}P]Q{I|L};{[TV]|[{I|L}S]}[R{I|L}]N{[{M(Oxidation (M))|F}H]|[RQ]}VV;{[TV]|[{I|L}S]}[R{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}RR;[AG]{I|L}[RD]Q{I|L}RR 3.289;2.4432;2.0659;1.9818;1.9723;1.5586;1.3961;1.3695;0.93421;0.79142 -;-;-;-;-;-;-;-;-;- 388 + 1 1.12 44583.9 1.0 11604 4975 16578 HBL1_DMSO_200M_050219_2,16581 HBL1_DMSO_200M_050219_2,16581,KATVTPVAGQL False False SLIRNLEQL 87.578636 543.319689929485 39333440.0 16578.0 ENST00000593854.5_1_19:7709481-7711320:+|nuORF;;nc|ENSG00000076944|Q15833-2|STXBP2;;ENSG00000076944|ENST00000221283|STXBP2;;nc|ENSG00000076944|Q15833-3|STXBP2;;ENST00000601061.1_1_19:7710099-7712134:+|nuORF 5.768919467926025 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16582 87.58 23.0 2349300.0 25 0 207400.0 + 17329 KLVGEFLEV 9 76 517.3009438605685 1032.587334787937 2 517.3002807497978 MULTI CID FTMS 0 0 0 16578 2115618.25 0.9272488884208951 -1 0.1326904296875 4 Unmodified _KLVGEFLEV_ ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1 31.26834338654808 0.1333407332142048 4 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{I|L}K{I|L}EV 9 5 + 62.189 0.0 0.0 6.0227 6.0227 86.804 0.0 0.0 0.0 8.925902063716862 44.10728139283883 8.925902063716862 9.57203416424356 0 0.9247425010840048 0.0 0.6109243748081782 0.0 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{I|L}K{I|L}EV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}GVK{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EGVK{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}G[K{I|L}]{M(Oxidation (M))|F}{I|L}EV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}RK{I|L}EV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}KR{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ERK{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EKR{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DG]{I|L}K{I|L}EV;{[QN]|[E{I|L}]|[KN]}[RK]{M(Oxidation (M))|F}{I|L}EV 6.0227;5.0957;4.9251;4.7899;4.7598;4.5893;4.5893;4.4188;4.2754;4.1101 -;-;-;-;-;-;-;-;-;- 309 1 1.12 46744.5 1.0 11605 4975 16578 HBL1_DMSO_200M_050219_2,16582 HBL1_DMSO_200M_050219_2,16582,KLVGEFLEV False True KLVGEFLEV 87.579816 517.300280749798 42886340.0 16578.0 nc|ENSG00000065427|Q15046-2|KARS1;;ENSG00000065427|ENST00000302445|KARS1 3.905033667882284 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16583 87.581 34.0 1616700.0 25 0 251920.0 23859 LVIVGLHQL 9 70 496.3186783424351 990.6228037516702 2 496.3187438845634 MULTI CID FTMS 0 0 0 16578 1635674.25 1.0 0 0.0 5 Unmodified _LVIVGLHQL_ ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1 34.10243960390752 0.1078313939113124 4 [{I|L}V]{I|L}R{I|L}HQ{I|L} 8 2 + 60.003 0.0 0.0 6.0571 6.0571 86.706 0.0 0.0 0.0 45.5655637381809 9.992369838338462 9.992369838338462 9.262137858390815 0 0.4247425010840047 2.0 0.0 0.6861818737241735 [{I|L}V]{I|L}R{I|L}HQ{I|L};[{I|L}V]{I|L}[VG]{I|L}HQ{I|L};[{I|L}V]{I|L}R{I|L}H[AG]{I|L};[{I|L}V]{I|L}[VG]{I|L}H[AG]{I|L} 6.0571;5.1221;4.8582;3.4999 -;+;-;- + 158 + 1 1.12 45028.6 1.0 11606 4975 16578 HBL1_DMSO_200M_050219_2,16583 HBL1_DMSO_200M_050219_2,16583,LVIVGLHQL True True IVIGVLHQL 87.580995 496.318743884563 10387271.0 16578.0 ENSG00000108788|ENST00000435881|MLX;;nc|ENSG00000108788|Q9UH92-2|MLX;;ENST00000585403.5_1_17:40721871-40723618:+|nuORF;;nc|ENSG00000108788|Q9UH92|MLX 3.928038994471232 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16584 87.583 72.0 810570.0 25 0 63341.0 + 44846 YPPAPFMHI 9 84 536.7677958537712 1071.5210387743423 2 536.7681762576103 MULTI CID FTMS 0 0 0 16578 594048.8125 0.1543902249649791 -3 0.3849639892578125 6 Unmodified _YPPAPFMHI_ ENSG00000143569|ENST00000428931|UBAP2L;ENST00000484819.1_1_1:154238957-154241481:+|nuORF;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 45.7499826716795 0.0496882803020414 4 YPPA{I|L}MMH{I|L} 9 2 + 68.599 0.0 0.0 6.402 6.402 89.005 0.0 0.0 0.0 55.32364189293044 11.249387366083 11.249387366083 11.625853418640377 0 0.3807196863200844 2.0 0.0 0.0 YPPA{I|L}MMH{I|L};YPPA[KC][SG]H{I|L};YPPA{I|L}[YV]{[{M(Oxidation (M))|F}C]|[YS]};YP{I|L}[PA]MMH{I|L};YP{I|L}[DV]{[ES]|[DT]|[{I|L}C]}H{I|L};YP{I|L}{[QC]|[C(Carbamidomethyl (C))A]}[QA]H{I|L};YP{I|L}[PA][YV]{[{M(Oxidation (M))|F}C]|[YS]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HM]W{I|L}{[QN]|[E{I|L}]|[KN]};[PA][KC]M{I|L}AP{[QN]|[E{I|L}]|[KN]};[PA]P{M(Oxidation (M))|F}[KC]AP{[QN]|[E{I|L}]|[KN]} 6.402;5.317;5.2167;4.726;4.5706;3.7023;3.611;2.4231;2.1397;2.0492 -;-;-;-;-;-;-;-;-;- 331 + 1 1.12 54369.7 1.0 11607 4975 16578 HBL1_DMSO_200M_050219_2,16584 HBL1_DMSO_200M_050219_2,16584,YPPAPFMHI True True YPPAPFMHI 87.582695 536.76817625761 85991760.0 16578.0 nc|ENSG00000143569|Q14157-5|UBAP2L;;ENSG00000143569|ENST00000428931|UBAP2L;;ENST00000484819.1_1_1:154238957-154241481:+|nuORF;;nc|ENSG00000143569|Q14157-3|UBAP2L 7.29880428314209 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16585 87.584 66.0 555150.0 25 0 87714.0 42040 VQTLWQQL 8 72 508.28348746072777 1014.5524219882556 2 508.7844421267509 MULTI CID FTMS 0 0 0 16578 408471.625 1.0 0 0.0 7 Unmodified _VQTLWQQL_ ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4 11.640296217721598 0.738950129755968 4 {[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}ES 6 4 24.87 0.0 0.0 2.4513 0.0 0.0 0.0 354.1944867678056 354.1944867678056 12.10581543087944 0.0 0.0 0.0 0 0.0 0.0 0.5 0.5 {[QV]|[N{I|L}]|[RA]|[KV]}T{I|L}ES 2.4513 - 202 1 1.12 36295.5 1.0 11608 4975 16578 HBL1_DMSO_200M_050219_2,16585 HBL1_DMSO_200M_050219_2,16585,VQTLWQQL False True SQLDTLIQV 87.584278 508.784442126751 5412964.5 16578.0 ENST00000471850.1_1_3:119298364-119306722:+|nuORF;;ENSG00000144843|ENST00000357003|ADPRH 3.6941827138264975 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16586 87.587 105.0 476360.0 25 0 42217.0 -1 KMLKAIEDL 9 90 538.8037443648501 1075.5929357965 2 538.8038207888603 MULTI CID FTMS 0 0 0 16578 398722.9375 0.3102627286628587 2 -0.2321853637695312 8 Oxidation (M) _KM(Oxidation (M))LKAIEDL_ ENSG00000079101|ENST00000692774|CLUL1 10.073929032068715 0.563993802247229 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[KA]{I|L}EEV 9 -1 + 44.371 0.0 0.0 4.1252 4.1252 75.949 0.0 0.0 0.0 7.7621675060644435 16.478174818886373 7.7621675060644435 7.7621675060644435 0 0.4247425010840047 0.8239087409443188 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[KA]{I|L}EEV;{[VA]|[{I|L}G]}A{M(Oxidation (M))|F}[KA]{I|L}EEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG][KA]{I|L}EEV;[Q{I|L}]{M(Oxidation (M))|F}[KA]{I|L}EEV;{[MS]|[{M(Oxidation (M))|F}A]}{[VA]|[{I|L}G]}[KA]{I|L}EEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[Q{I|L}]{[TV]|[{I|L}S]}EV;{[VA]|[{I|L}G]}A{M(Oxidation (M))|F}[Q{I|L}]{[TV]|[{I|L}S]}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QRRR[NS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[KA]R[WQ];[Q{I|L}]{M(Oxidation (M))|F}[Q{I|L}]{[TV]|[{I|L}S]}EV 4.1252;3.4036;3.2691;3.1695;2.5031;2.2182;1.4966;1.3848;1.3848;1.2625 -;-;-;-;-;-;-;-;-;- 282 1 1.12 49924.7 1.0 11609 4975 16578 HBL1_DMSO_200M_050219_2,16586 HBL1_DMSO_200M_050219_2,16586,KMLKAIEDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16587 87.59 166.0 375990.0 25 0 68568.0 + 2575 ASIDILHSI 9 85 484.7738053092339 967.533057685268 2 484.7743713259697 MULTI CID FTMS 0 0 0 16578 390718.25 0.3635149706838451 2 -0.2321853637695312 9 Unmodified _ASIDILHSI_ ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11 88.90359156742426 0.0153595091083554 4 {[SA]|[TG]}{I|L}D{I|L}{I|L}HS{I|L} 9 0 + 77.284 0.0 0.0 7.9878 7.9878 79.733 0.0 0.0 0.0 20.157942671832323 0.8297423506476491 0.8297423506476491 0.8297423506476491 0 1.031234684152075 1.3010299956639813 1.9916440611282624 0.0 + + {[SA]|[TG]}{I|L}D{I|L}{I|L}HS{I|L};{[SA]|[TG]}{I|L}D{I|L}{I|L}HTV;{[TV]|[{I|L}S]}H{I|L}[{M(Oxidation (M))|F}V][RP];{[SA]|[TG]}{I|L}[{M(Oxidation (M))|F}V]{I|L}[YR];[{I|L}V]QQ{I|L}D[RP];{[SA]|[TG]}[{M(Oxidation (M))|F}V]{I|L}{I|L}[YR];{[SA]|[TG]}{I|L}[{M(Oxidation (M))|F}V][YR]{I|L};[H{I|L}]S{I|L}[{M(Oxidation (M))|F}V][RP];[H{I|L}]{I|L}S[{M(Oxidation (M))|F}V][RP];{[SA]|[TG]}[{M(Oxidation (M))|F}V]{I|L}[YR]{I|L} 7.9878;7.902;3.8251;3.3027;2.8152;2.4734;2.2921;2.0035;1.8215;1.4628 +;-;-;-;-;-;-;-;-;- + 336 + 1 1.12 53057.3 1.0 11610 4975 16578 HBL1_DMSO_200M_050219_2,16587 HBL1_DMSO_200M_050219_2,16587,ASIDILHSI True True ASIDILHSI 87.589772 484.77437132597 9243609.0 16578.0 ENSG00000108671|ENST00000261712|PSMD11;;nc|ENSG00000108671|O00231-2|PSMD11 1.9570476214090984 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16588 87.595 297.0 514600.0 25 0 20311.0 -1 0 130 966.9640784805124 1931.913604027825 2 966.9669677615166 MULTI CID FTMS 0 0 0 16578 338954.71875 0.1433262035935284 -2 0.2598724365234375 10 4 [MN]PN{I|L}NA[PG]N{[RE]|[WV]}DAN{I|L} 16 -1 92.469 0.0 0.0 4.7864 0.0 0.0 0.0 208.07322107486564 208.07322107486564 25.162118135860226 0.0 0.0 0.0 0 1.4916440611282624 1.5228787452803376 0.3252574989159953 1.1549471895720984 [MN]PN{I|L}NA[PG]N{[RE]|[WV]}DAN{I|L} 4.7864 - 36572 + 1 1.12 103029.5 1.0 11611 4975 16578 HBL1_DMSO_200M_050219_2,16588 HBL1_DMSO_200M_050219_2,16588, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16589 87.599 172.0 254790.0 25 0 26082.0 + 15519 IPVHLISV 8 69 439.279120522565 876.54368811193 2 439.2792846560478 MULTI CID FTMS 0 0 0 16578 295510.75 0.9356258234414818 1 -0.1111602783203125 11 Unmodified _IPVHLISV_ REV__ENST00000585750.1_1_18:61011618-61022465:-|nuORF 38.99230528602208 0.2511498934509823 4 [{I|L}P]VH{I|L}{I|L}[VS] 8 -1 + 29.614 0.0 0.0 3.3785 3.3785 63.747 0.0 0.0 0.0 0.8241202626363453 4.921525057367404 0.8241202626363453 0.8241202626363453 0 0.5 0.0 0.0 0.0 [{I|L}P]VH{I|L}{I|L}[VS];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}V]{I|L}{I|L}[VS];[{I|L}P]V{I|L}H{I|L}[VS] 3.3785;3.2845;2.6917 +;-;- + 64 1 1.12 42646.2 1.0 11612 4975 16578 HBL1_DMSO_200M_050219_2,16589 HBL1_DMSO_200M_050219_2,16589,IPVHLISV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16590 87.612 769.0 305230.0 25 0 26050.0 + 45072 YPYHLSDIMV 10 174 619.2999636183504 1236.5853743035009 2 619.3013183474541 MULTI CID FTMS 0 0 0 16578 262497.8125 0.5772322978730393 -2 0.2598724365234375 12 Unmodified _YPYHLSDIMV_ ENSG00000176853|ENST00000334705|FAM91A1;ENST00000454544.2_1_1:147907560-147907839:+|nuORF 67.34385681178166 0.0190221733545476 4 {[TV]|[{I|L}S]}DH{I|L}{M(Oxidation (M))|F}Y{I|L}MV 10 5 + 71.653 0.0 0.0 5.7945 5.7945 76.834 0.0 0.0 0.0 5.445764889587537 16.53212513775344 5.445764889587537 3.0102999566398125 0 0.6747425010840047 0.744727494896694 1.0114393726401687 0.0 {[TV]|[{I|L}S]}DH{I|L}{M(Oxidation (M))|F}Y{I|L}MV;{[TV]|[{I|L}S]}DHYPY{I|L}MV;{[TV]|[{I|L}S]}DH{I|L}{M(Oxidation (M))|F}{I|L}YMV;[{I|L}T][WC(Carbamidomethyl (C))]{I|L}SD{I|L}MV;{NN|[MP]|[D{I|L}]|[EV]}Q{[CT]|[{M(Oxidation (M))|F}G]}{I|L}SD{I|L}MV;{[TV]|[{I|L}S]}DHYP{I|L}YMV;[H{I|L}]{M(Oxidation (M))|F}Y{I|L}SD{I|L}MV;{[WN]|[YH]}PY{I|L}SD{I|L}MV;{[TV]|[{I|L}S]}DH{I|L}Y{M(Oxidation (M))|F}{I|L}MV;{NN|[MP]|[D{I|L}]|[EV]}MQQPY{I|L}MV 5.7945;5.551;5.4902;5.3541;5.3381;5.2467;5.1922;5.1922;5.1616;5.1508 -;-;-;-;-;-;-;-;-;- 18736 1 1.12 168295.8 1.0 11613 4975 16578 HBL1_DMSO_200M_050219_2,16590 HBL1_DMSO_200M_050219_2,16590,YPYHLSDIMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16591 87.617 285.0 340680.0 25 0 13026.0 -1 0 103 973.972404501176 1945.930256069152 2 974.4741088747978 MULTI CID FTMS 0 0 0 16578 262917.125 0.2374033833873604 -2 0.2598724365234375 13 4 [MN]PN{I|L}N[QP]DRQAEN{I|L} 15 -1 64.966 0.0 0.0 3.3386 0.0 0.0 0.0 208.07325159244377 208.07325159244377 44.05816732341477 0.0 0.0 0.0 0 0.9291746928241128 1.5228787452803376 0.0 0.7134679910804405 [MN]PN{I|L}N[QP]DRQAEN{I|L} 3.3386 - 7107 + 1 1.12 69870.2 1.0 11614 4975 16578 HBL1_DMSO_200M_050219_2,16591 HBL1_DMSO_200M_050219_2,16591, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16592 87.631 800.0 536610.0 25 0 32276.0 + 26704 NYPAFMMEM 9 222 575.2244555618495 1148.4343581904989 2 575.2251464724541 MULTI CID FTMS 0 0 0 16578 213646.171875 0.5740994371679112 -2 0.2598724365234375 14 Oxidation (M) _NYPAFM(Oxidation (M))MEM_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 64.23631603340823 0.0237365939569086 4 [YN]{I|L}{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}MEM 9 2 + 38.69 0.0 0.0 3.3689 3.3689 69.548 0.0 0.0 0.0 3.984484532805155 3.984484532805155 3.984484532805155 3.984484532805155 0 0.9291746928241128 2.0 0.0 1.5629529932484498 [YN]{I|L}{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}MEM;[YN]{[YD]|[{M(Oxidation (M))|F}M]}M{[QG]|[NA]}QM;[YN]{[QG]|[NA]}MEM[YN];[YN]P[NS]MTC(Carbamidomethyl (C))Y;[YN]{[QG]|[NA]}M[DV]C(Carbamidomethyl (C))Y;[YN]{[QG]|[NA]}[YN]MEM;[YN]{[YD]|[{M(Oxidation (M))|F}M]}[C(Carbamidomethyl (C))R]QM;[PA]{M(Oxidation (M))|F}{M(Oxidation (M))|F}MEM[YN];[YN]{[QG]|[NA]}M[YN]EM;[YN][C(Carbamidomethyl (C))R]EM[YN] 3.3689;3.022;2.935;2.7852;2.7591;2.5915;2.4579;2.4064;2.375;2.3709 -;-;-;-;-;-;-;-;-;- 4122 1 1.12 316892.8 0.8999999761581421 11615 4975 16578 HBL1_DMSO_200M_050219_2,16592 HBL1_DMSO_200M_050219_2,16592,NYPAFMMEM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16593 87.634 142.0 360800.0 25 0 43411.0 -1 EFCREGGTSI 10 88 578.2564401930476 1154.4983274528952 2 578.2563354372978 MULTI CID FTMS 0 0 0 16578 211232.984375 0.6423725890080816 -1 0.1326904296875 15 Carbamidomethyl (C) _EFC(Carbamidomethyl (C))REGGTSI_ ENST00000497456.1_1_7:100210444-100211397:+|nuORF 15.847184025352805 0.5816416552707754 4 [{I|L}P]E{M(Oxidation (M))|F}E 5 -1 31.427 0.0 0.0 2.7221 0.0 0.0 0.0 536.1847171114811 536.1847171114811 14.947274948966935 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}P]E{M(Oxidation (M))|F}E 2.7221 - 113 1 1.12 46188.1 1.0 11616 4975 16578 HBL1_DMSO_200M_050219_2,16593 HBL1_DMSO_200M_050219_2,16593,EFCREGGTSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16594 87.649 800.0 209530.0 25 0 16092.0 + + -1 RYYGESLPFGDNSF 14 113 826.373707377358 1650.7328618215158 2 826.3743774294853 MULTI CID FTMS 0 0 0 16578 207331.71875 1.0 0 0.0 16 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))REC(Carbamidomethyl (C))KLC(Carbamidomethyl (C))FRHW_ ENSG00000137509|ENST00000313010|PRCP;nc|ENSG00000137509|P42785-2|PRCP 0.0 0.8751479354844584 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GDN[QP]{I|L}P{M(Oxidation (M))|F}GDNS{M(Oxidation (M))|F} 15 -1 + 76.397 0.0 0.0 4.6281 4.6281 70.281 0.0 0.0 0.0 2.085521743960328 9.607308385314925 2.085521743960328 2.085521743960328 0 1.048455006504028 1.3010299956639813 0.6505149978319906 0.5796896906561032 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GDN[QP]{I|L}P{M(Oxidation (M))|F}GDNS{M(Oxidation (M))|F};[{I|L}P][C(Carbamidomethyl (C))D]NR{I|L}P{M(Oxidation (M))|F}GDNS{M(Oxidation (M))|F};[NS]{[QS]|[NT]}N[QP]{I|L}P{M(Oxidation (M))|F}GDNS{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GDN[QP]{I|L}P{M(Oxidation (M))|F}GDGGS{M(Oxidation (M))|F};[{I|L}P]S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{[CA]|SS}P{M(Oxidation (M))|F}GDNS{M(Oxidation (M))|F};[{I|L}P][C(Carbamidomethyl (C))D]N[VG]{I|L}P{M(Oxidation (M))|F}GDNS{M(Oxidation (M))|F};[{I|L}P][C(Carbamidomethyl (C))D]NR{I|L}P{M(Oxidation (M))|F}GDGGS{M(Oxidation (M))|F};[{I|L}P][C(Carbamidomethyl (C))D]GGR{I|L}P{M(Oxidation (M))|F}GDNS{M(Oxidation (M))|F};[NS]{M(Oxidation (M))|F}HNR{I|L}P{M(Oxidation (M))|F}GDNS{M(Oxidation (M))|F};[DN][RP]WS{I|L}P{M(Oxidation (M))|F}GDNS{M(Oxidation (M))|F} 4.6281;4.5017;4.1246;4.081;3.9894;3.9535;3.9535;3.9535;3.9515;3.9188 -;-;-;-;-;-;-;-;-;- 2010 1 1.12 118038.2 0.8700000047683716 11617 4975 16578 HBL1_DMSO_200M_050219_2,16594 HBL1_DMSO_200M_050219_2,16594,CRECKLCFRHW False False RYYGESLPFGDNSF 87.64893 826.374377429485 2154154.5 16578.0 ENSG00000137509|ENST00000313010|PRCP;;nc|ENSG00000137509|P42785-2|PRCP 7.605499903361003 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16595 87.651 84.0 564070.0 25 0 84553.0 + 38275 TPYWMAPEV 9 80 547.2535785490691 1092.492604164938 2 547.2552368044853 MULTI CID FTMS 0 0 0 16578 177083.296875 0.1618986596845284 -2 0.2598724365234375 17 Unmodified _TPYWMAPEV_ ENSG00000011566|ENST00000263881|MAP4K3;ENSG00000012983|ENST00000682126|MAP4K5;ENSG00000065613|ENST00000369755|SLK;ENSG00000071054|ENST00000324219|MAP4K4;ENSG00000072786|ENST00000176763|STK10;ENSG00000077264|ENST00000372007|PAK3;ENSG00000101349|ENST00000353224|PAK5;ENSG00000104814|ENST00000396857|MAP4K1;ENSG00000123572|ENST00000243300|NRK;ENSG00000135090|ENST00000392533|TAOK3;ENSG00000137843|ENST00000560346|PAK6;ENSG00000141503|ENST00000355280|MINK1;ENSG00000149269|ENST00000356341|PAK1;ENSG00000149930|ENST00000308893|TAOK2;ENSG00000154310|ENST00000436636|TNIK;ENSG00000160551|ENST00000261716|TAOK1;ENSG00000168067|ENST00000294066|MAP4K2;ENSG00000176601|ENST00000392915|MAP3K19;ENSG00000180370|ENST00000327134|PAK2;ENST00000476609.1_1_2:102441885-102476398:+|nuORF;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;ENST00000577583.1_1_17:27807410-27838022:+|nuORF;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;nc|ENSG00000011566|Q8IVH8-3|MAP4K3;nc|ENSG00000065613|Q9H2G2-2|SLK;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000077264|O75914-3|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000104814|Q92918|MAP4K1;nc|ENSG00000137843|Q9NQU5-2|PAK6;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1;nc|ENSG00000149269|Q13153-2|PAK1;nc|ENSG00000149930|Q9UL54-2|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;nc|ENSG00000160551|Q7L7X3-2|TAOK1;nc|ENSG00000160551|Q7L7X3-3|TAOK1;nc|ENSG00000168067|Q12851-2|MAP4K2;nc|ENSG00000176601|Q56UN5-3|MAP3K19;nc|ENSG00000176601|Q56UN5-4|MAP3K19;nc|ENSG00000176601|Q56UN5-5|MAP3K19;nc|ENSG00000176601|Q56UN5-7|MAP3K19 48.345845343767074 0.0439967357579942 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WTMA 6 5 44.659 0.0 0.0 4.0878 0.0 0.0 0.0 340.1474200473738 340.1474200473738 18.21501508154121 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.805462187404089 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WTMA 4.0878 - 337 1 1.12 47719.1 1.0 11618 4975 16578 HBL1_DMSO_200M_050219_2,16595 HBL1_DMSO_200M_050219_2,16595,TPYWMAPEV True True TPYWMAPEV 87.650819 547.255236804485 19779908.0 16578.0 nc|ENSG00000176601|Q56UN5-7|MAP3K19;;nc|ENSG00000071054|O95819|MAP4K4;;nc|ENSG00000011566|Q8IVH8-3|MAP4K3;;nc|ENSG00000077264|O75914-4|PAK3;;nc|ENSG00000149930|Q9UL54-4|TAOK2;;nc|ENSG00000141503|Q8N4C8-4|MINK1;;ENSG00000154310|ENST00000436636|TNIK;;nc|ENSG00000176601|Q56UN5-4|MAP3K19;;ENSG00000071054|ENST00000324219|MAP4K4;;ENSG00000065613|ENST00000369755|SLK;;nc|ENSG00000154310|Q9UKE5-4|TNIK;;ENSG00000149269|ENST00000356341|PAK1;;ENSG00000012983|ENST00000682126|MAP4K5;;nc|ENSG00000154310|Q9UKE5-2|TNIK;;ENSG00000104814|ENST00000396857|MAP4K1;;ENSG00000176601|ENST00000392915|MAP3K19;;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;;nc|ENSG00000071054|O95819-5|MAP4K4;;nc|ENSG00000154310|Q9UKE5-6|TNIK;;ENSG00000123572|ENST00000243300|NRK;;nc|ENSG00000071054|O95819-4|MAP4K4;;nc|ENSG00000149930|Q9UL54-2|TAOK2;;nc|ENSG00000141503|Q8N4C8-2|MINK1;;ENST00000476609.1_1_2:102441885-102476398:+|nuORF;;nc|ENSG00000160551|Q7L7X3-2|TAOK1;;nc|ENSG00000154310|Q9UKE5-7|TNIK;;nc|ENSG00000176601|Q56UN5-5|MAP3K19;;nc|ENSG00000104814|Q92918|MAP4K1;;nc|ENSG00000149269|Q13153-2|PAK1;;ENSG00000160551|ENST00000261716|TAOK1;;nc|ENSG00000168067|Q12851-2|MAP4K2;;nc|ENSG00000141503|Q8N4C8-5|MINK1;;nc|ENSG00000141503|Q8N4C8-3|MINK1;;nc|ENSG00000176601|Q56UN5-3|MAP3K19;;nc|ENSG00000154310|Q9UKE5-8|TNIK;;ENSG00000077264|ENST00000372007|PAK3;;nc|ENSG00000160551|Q7L7X3-3|TAOK1;;ENSG00000137843|ENST00000560346|PAK6;;ENSG00000168067|ENST00000294066|MAP4K2;;ENSG00000011566|ENST00000263881|MAP4K3;;ENSG00000072786|ENST00000176763|STK10;;nc|ENSG00000071054|O95819-2|MAP4K4;;ENSG00000180370|ENST00000327134|PAK2;;ENST00000577583.1_1_17:27807410-27838022:+|nuORF;;nc|ENSG00000154310|Q9UKE5-3|TNIK;;nc|ENSG00000071054|O95819-6|MAP4K4;;nc|ENSG00000065613|Q9H2G2-2|SLK;;nc|ENSG00000077264|O75914-3|PAK3;;nc|ENSG00000154310|Q9UKE5-5|TNIK;;nc|ENSG00000071054|O95819-3|MAP4K4;;ENSG00000135090|ENST00000392533|TAOK3;;ENSG00000141503|ENST00000355280|MINK1;;ENSG00000149930|ENST00000308893|TAOK2;;nc|ENSG00000137843|Q9NQU5-2|PAK6;;nc|ENSG00000077264|O75914|PAK3;;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;;ENSG00000101349|ENST00000353224|PAK5 6.350124359130859 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16596 87.665 800.0 119000.0 25 0 12483.0 + 13005 HAPSIVFI 8 129 442.2557528620715 882.496952790943 2 442.2556030154228 MULTI CID FTMS 0 0 0 16578 168818.125 0.4214523816805232 2 -0.2321853637695312 18 Unmodified _HAPSIVFI_ ENSG00000100764|ENST00000261303|PSMC1;ENST00000555787.1_1_14:90734518-90735894:+|nuORF;nc|ENSG00000100764|P62191-2|PSMC1 42.96799951952854 0.1846367511955703 4 [HA]V[TP]V{M(Oxidation (M))|F}{I|L} 8 3 + 42.427 0.0 0.0 4.8076 4.8076 75.005 0.0 0.0 0.0 7.171154940041674 9.731975075880328 7.171154940041674 4.3933269383026285 0 0.7742275032520141 1.3979400086720375 0.7059771852360797 0.0 [HA]V[TP]V{M(Oxidation (M))|F}{I|L};[HA][PS]{I|L}V{M(Oxidation (M))|F}{I|L};[{I|L}P]SAHV{M(Oxidation (M))|F}{I|L};[VP]TAHV{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}PAHV{M(Oxidation (M))|F}{I|L};[{I|L}A][PS]HV{M(Oxidation (M))|F}{I|L};[TA][VP]HV{M(Oxidation (M))|F}{I|L};[{I|L}P]SV[HA]{M(Oxidation (M))|F}{I|L};[VP]TV[HA]{M(Oxidation (M))|F}{I|L};[PA]{[TV]|[{I|L}S]}HV{M(Oxidation (M))|F}{I|L} 4.8076;4.3097;3.995;3.7084;3.5328;3.3585;2.0792;1.8428;1.5562;1.3841 -;+;-;-;-;-;-;-;-;- + 235 1 1.12 75544.2 0.6399999856948853 11619 4975 16578 HBL1_DMSO_200M_050219_2,16596 HBL1_DMSO_200M_050219_2,16596,HAPSIVFI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16597 87.668 163.0 557380.0 25 0 45505.0 + 38927 TVLRVDQIIMA 11 69 629.8624792830765 1257.7104056329529 2 629.8637573122978 MULTI CID FTMS 0 0 0 16578 156731.046875 0.6457808677545193 -1 0.1326904296875 19 Unmodified _TVLRVDQIIMA_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 12.872603262515298 0.7673816944342327 4 Q{I|L}{I|L}{[DS]|[MA]|[CV]|TT} 5 6 27.218 0.0 0.0 2.1641 0.0 0.0 683.3960438459 0.0 683.3960438459 0.0 15.959427631194565 0.0 0.0 0 0.5 0.0 0.0 0.0 + Q{I|L}{I|L}{[DS]|[MA]|[CV]|TT} 2.1641 + + 64 1 1.12 76342.7 1.0 11620 4975 16578 HBL1_DMSO_200M_050219_2,16597 HBL1_DMSO_200M_050219_2,16597,TVLRVDQIIMA False True TVLRVDQIIMA 87.667846 629.863757312298 2926480.5 16578.0 nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 3.0792969862620034 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16598 87.683 800.0 151450.0 25 0 8965.1 23998 LVVRVLWWI 9 150 592.3721244091071 1182.729695885014 2 592.3729736208916 MULTI CID FTMS 0 0 0 16578 135619.203125 1.0 0 0.0 20 Unmodified _LVVRVLWWI_ ENSG00000164535|ENST00000297056|DAGLB;nc|ENSG00000164535|Q8NCG7-3|DAGLB;nc|ENSG00000164535|Q8NCG7-4|DAGLB 5.230669730166228 0.7320841359114558 4 {I|L} 1 8 10.278 0.0 0.0 0.86897 0.0 0.0 1051.6347537236843 0.0 1051.6347537236843 0.0 0.1889428044469987 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.86897 + + 110 + 1 1.12 95933.1 0.7400000095367432 11621 4975 16578 HBL1_DMSO_200M_050219_2,16598 HBL1_DMSO_200M_050219_2,16598,LVVRVLWWI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16600 87.687 14.0 3394700.0 25 0 607440.0 + 32736 SEAVGALVYL 10 72 511.2824809890437 0 511.2823669314384 PEAK CID FTMS 0 0 0 16599 3035766.0 0.7545799805511655 1 -0.1210250854492187 1 Unmodified _SEAVGALVYL_ REV__ENSG00000065268|ENST00000585809|WDR18 26.88365393820708 0.2428278298207118 4 V{[SA]|[TG]}{I|L}D 5 -1 21.22 0.0 0.0 2.0793 0.0 0.0 294.1644359997686 238.11951624088127 532.2839522406499 0.0 0.0 0.0 0.0 0 0.5 0.0 1.274227503252014 0.0 V{[SA]|[TG]}{I|L}D 2.0793 - 140 + 1 1.12 41973.8 1.0 11622 4976 16599 HBL1_DMSO_200M_050219_2,16600 HBL1_DMSO_200M_050219_2,16600,SEAVGALVYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16601 87.689 14.0 3480000.0 25 0 453910.0 + 22565 LPWSNPLKV 9 68 527.3083330128565 1052.6021130925128 2 527.3085204958916 MULTI CID FTMS 0 0 0 16599 3284647.0 0.8286869526309728 1 -0.1210250854492187 2 Unmodified _LPWSNPLKV_ ENSG00000134077|ENST00000452837|THUMPD3 37.77132515983256 0.0876909340306915 4 {I|L}PW[NS]P{I|L}VK 9 2 + 69.671 0.0 0.0 6.6189 6.6189 78.66 0.0 0.0 0.0 13.6219583558281 2.3044892137827446 2.3044892137827446 2.3044892137827446 0 2.079689690656103 2.0 0.0 0.0 {I|L}PW[NS]P{I|L}VK;{I|L}PW[NS]P{I|L}KV 6.6189;6.4 -;+ + 240 + 1 1.12 47311.0 1.0 11623 4976 16599 HBL1_DMSO_200M_050219_2,16601 HBL1_DMSO_200M_050219_2,16601,LPWSNPLKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16602 87.69 23.0 1983900.0 25 0 129180.0 + 13944 HYITPMMEL 9 69 567.7699772879648 1133.5254016427295 2 567.7695800662041 MULTI CID FTMS 0 0 0 16599 1782676.25 0.9546904909576118 -1 0.1111602783203125 3 Unmodified _HYITPMMEL_ ENSG00000099901|ENST00000430524|RANBP1;nc|ENSG00000099901|P43487-2|RANBP1;nc|ENSG00000099901|P43487|RANBP1 60.38955033654506 0.025866396858536 4 {[WN]|[YH]}{I|L}TPMM{[QN]|[E{I|L}]|[KN]} 9 0 + 59.274 0.0 0.0 5.2292 5.2292 86.752 0.0 0.0 0.0 18.69666231504993 45.779638343433504 18.69666231504993 26.923708980123383 0 0.2614393726401688 1.154901959985743 0.9247425010840048 0.0 + + {[WN]|[YH]}{I|L}TPMM{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}[KG]TPMM{[QN]|[E{I|L}]|[KN]};{[WN]|[YH]}[VP][{M(Oxidation (M))|F}V]M{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}[RD]PMM{[QN]|[E{I|L}]|[KN]};[VP]{[WN]|[YH]}[{M(Oxidation (M))|F}V]M{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}T]Y[WE]Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HV]Y[{I|L}T]{[QN]|[E{I|L}]|[KN]};[VP]YY[YG]M{[QN]|[E{I|L}]|[KN]};[MT][YT]Y[{I|L}T]{[QN]|[E{I|L}]|[KN]} 5.2292;2.854;2.1673;1.9799;0.88288;0.84144;0.48561;0.46197;0.2899 +;-;-;-;-;-;-;-;- + 114 1 1.12 40033.8 1.0 11624 4976 16599 HBL1_DMSO_200M_050219_2,16602 HBL1_DMSO_200M_050219_2,16602,HYITPMMEL True True HYITPMMEL 87.689796 567.769580066204 36324636.0 16599.0 nc|ENSG00000099901|P43487|RANBP1;;ENSG00000099901|ENST00000430524|RANBP1;;nc|ENSG00000099901|P43487-2|RANBP1 9.215022087097168 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16603 87.691 25.0 2127700.0 25 0 295980.0 + 32203 RVVDLITNL 9 69 521.8158491269571 1041.617145320714 2 521.8163940310478 MULTI CID FTMS 0 0 0 16599 1376726.625 0.6468230430304955 1 -0.1210250854492187 4 Unmodified _RVVDLITNL_ ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 34.93206674587334 0.1032771302489716 4 {I|L}{I|L}TN{I|L} 5 4 51.938 0.0 0.0 4.9863 0.0 0.0 469.2648837244138 0.0 469.2648837244138 0.0 41.10074482369231 0.0 0.0 0 1.274227503252014 0.0 0.4247425010840047 0.0 + {I|L}{I|L}TN{I|L} 4.9863 + + 126 1 1.12 49992.7 1.0 11625 4976 16599 HBL1_DMSO_200M_050219_2,16603 HBL1_DMSO_200M_050219_2,16603,RVVDLITNL True True RVVDLITNL 87.690975 521.816394031048 14831091.0 16599.0 ENSG00000086758|ENST00000262854|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 4.9019739627838135 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16604 87.692 36.0 1768100.0 25 0 230360.0 + 3047 AVLERLVDI 9 86 514.3112727450186 0 514.3113281130791 PEAK CID FTMS 0 0 0 16599 1146370.875 0.6515561598529983 -1 0.1111602783203125 5 Unmodified _AVLERLVDI_ ENSG00000160714|ENST00000292211|UBE2Q1;ENST00000497453.1_1_1:154524878-154531400:-|nuORF 53.40400417844725 0.023745606374537 4 {I|L}E 2 7 22.959 0.0 0.0 2.2364 0.0 0.0 170.10486529678775 611.3527310460754 781.4575963428631 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 + {I|L}E 2.2364 + + 108 + 1 1.12 54231.8 1.0 11626 4976 16599 HBL1_DMSO_200M_050219_2,16604 HBL1_DMSO_200M_050219_2,16604,AVLERLVDI True True AVLERLVDI 87.692152 514.311328113079 12433676.0 16599.0 ENST00000497453.1_1_1:154524878-154531400:-|nuORF;;ENSG00000160714|ENST00000292211|UBE2Q1 3.1959053675333657 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16605 87.694 56.0 489740.0 25 0 65195.0 11488 GIIPRVIQL 9 49 504.8321147498242 1007.6496765664484 2 504.8322631716728 MULTI CID FTMS 0 0 0 16599 983937.375 0.0349400273430217 -2 0.2438507080078125 6 Unmodified _GIIPRVIQL_ ENSG00000226650|ENST00000435029|KIF4B 30.22481116460888 0.1466181017706357 4 {[VA]|[{I|L}G]}{I|L}{I|L} 4 5 35.177 0.0 0.0 3.491 0.0 0.0 0.0 608.3477877252561 608.3477877252561 22.703037561203843 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}{I|L}{I|L} 3.491 - 16 + 1 1.12 28537.8 1.0 11627 4976 16599 HBL1_DMSO_200M_050219_2,16605 HBL1_DMSO_200M_050219_2,16605,GIIPRVIQL False True AVIPRLVQL 87.693573 504.832263171673 631579776.0 16599.0 ENSG00000173801|ENST00000393931|JUP;;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 4.890727678934733 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16606 87.695 76.0 970540.0 25 0 85644.0 + 18493 KYNIMLVRL 9 85 575.3444511184405 1148.6743493036809 2 575.3447143435478 MULTI CID FTMS 0 0 0 16599 814071.6875 0.3626474754396462 -1 0.1111602783203125 7 Unmodified _KYNIMLVRL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 21.59015148037692 0.2564810811560323 4 KYN{I|L}M{I|L}V[R{I|L}] 9 0 + 59.765 0.0 0.0 5.2029 5.2029 77.19 0.0 0.0 0.0 35.07183756753818 0.915149811213496 0.915149811213496 4.771212547196626 0 0.8494850021680094 0.9208187539523752 0.0 0.0 + + KYN{I|L}M{I|L}V[R{I|L}];KY{I|L}NM{I|L}V[R{I|L}];KYN{I|L}{I|L}MV[R{I|L}];KYGG{I|L}M{I|L}V[R{I|L}];KY{I|L}N{I|L}MV[R{I|L}];KY{I|L}GGM{I|L}V[R{I|L}];KYGG{I|L}{I|L}MV[R{I|L}];KY{I|L}GG{I|L}MV[R{I|L}];K{I|L}YNM{I|L}V[R{I|L}];K{I|L}YN{I|L}MV[R{I|L}] 5.2029;4.7876;4.6788;4.4013;4.2634;3.9859;3.8771;3.4618;3.4196;2.8955 +;-;-;-;-;-;-;-;-;- + 236 + 1 1.12 60381.5 1.0 11628 4976 16599 HBL1_DMSO_200M_050219_2,16606 HBL1_DMSO_200M_050219_2,16606,KYNIMLVRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16607 87.697 85.0 851650.0 25 0 138030.0 + 1632 ALMAAPLSL 9 75 451.75274496202985 901.4909369908596 2 451.7528564333916 MULTI CID FTMS 0 0 0 16599 773850.5 0.0595846073543612 61 -6.639137268066406 8 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 59.79521254764295 0.0261954583213598 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 3 + 63.082 0.0 0.0 6.9975 6.9975 81.405 0.0 0.0 0.0 14.13756432606572 7.998037644757048 7.998037644757048 3.0102999566398125 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}PAA{I|L}S{I|L};[{I|L}A]{M(Oxidation (M))|F}PA{I|L}AS{I|L};[{I|L}A]{M(Oxidation (M))|F}ASP{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APA{I|L}S{I|L};[{I|L}A]{M(Oxidation (M))|F}AP{I|L}AS{I|L};[{I|L}A]{M(Oxidation (M))|F}PA{I|L}SA{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}AP{I|L}SA{I|L} 6.9975;6.6636;6.1103;6.1103;5.9928;5.7764;5.7764;5.751;5.4293;5.4171 -;-;-;-;-;-;-;-;-;- 739 1 1.12 60399.3 1.0 11629 4976 16599 HBL1_DMSO_200M_050219_2,16607 HBL1_DMSO_200M_050219_2,16607,ALMAAPLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16608 87.701 171.0 558110.0 25 0 73714.0 + 5583 DMYLVPKL 8 97 489.76996419677096 977.525375460342 2 489.7704040408134 MULTI CID FTMS 0 0 0 16599 404232.53125 0.2176470416019945 -2 0.2438507080078125 9 Unmodified _DMYLVPKL_ ENSG00000186141|ENST00000334163|POLR3C 48.345845343767074 0.1470278396477103 4 [MD]Y{I|L}VPK{I|L} 8 0 + 70.099 0.0 0.0 7.171 7.171 92.409 0.0 0.0 0.0 48.93553046518285 13.315468932362576 13.315468932362576 13.622731327798547 0 1.1861818737241734 2.0 0.0 0.1861818737241735 + + [MD]Y{I|L}VPK{I|L};[MD]Y{I|L}V{I|L}[KP] 7.171;5.7775 +;- + 124 + 1 1.12 79033.8 1.0 11630 4976 16599 HBL1_DMSO_200M_050219_2,16608 HBL1_DMSO_200M_050219_2,16608,DMYLVPKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16609 87.704 157.0 662630.0 25 0 72420.0 + 25592 NFIEKVEAL 9 127 531.7954326692338 1061.5763124052676 2 531.7958862185478 MULTI CID FTMS 0 0 0 16599 384319.96875 0.0313120653263007 -2 0.2438507080078125 10 Unmodified _NFIEKVEAL_ ENSG00000092201|ENST00000216297|SUPT16H 53.40400417844725 0.0329064971918313 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}EKVEA{I|L} 9 0 + 46.51 0.0 0.0 4.3812 4.3812 68.895 0.0 0.0 0.0 1.8141515031647013 5.0356705871273135 1.8141515031647013 1.8141515031647013 0 1.837180496500464 0.0 0.4247425010840047 0.0 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}EKVEA{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SR;{[VA]|[{I|L}G]}SV{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[DG]A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SR;{[VA]|[{I|L}G]}SV{I|L}E{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[DG]A{I|L};{[TV]|[{I|L}S]}GV{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[DG]A{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}E{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[DG]A{I|L} 4.3812;4.2103;3.9069;3.2243;3.1991;3.0039;2.9043;2.7508;2.6879;2.6008 +;-;-;-;-;-;-;-;-;- + 3026 + 1 1.12 83855.3 1.0 11631 4976 16599 HBL1_DMSO_200M_050219_2,16609 HBL1_DMSO_200M_050219_2,16609,NFIEKVEAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16610 87.707 160.0 293590.0 25 0 22856.0 + -1 IAQMGSFIVF 10 93 564.7901477354502 1127.5657425377003 2 564.7906982302666 MULTI CID FTMS 0 0 0 16599 352759.0 0.7567684398605672 -2 0.2438507080078125 11 Oxidation (M) _IAQM(Oxidation (M))GSFIVF_ REV__ENSG00000138496|ENST00000682323|PARP9;REV__nc|ENSG00000138496|Q8IXQ6|PARP9 19.256988751693697 0.5244284437930726 4 [QP]QAYY 6 -1 38.409 0.0 0.0 3.4064 0.0 0.0 0.0 374.2065632230129 374.2065632230129 14.59691590396389 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.805462187404089 [QP]QAYY 3.4064 - 198 1 1.12 44147.7 1.0 11632 4976 16599 HBL1_DMSO_200M_050219_2,16610 HBL1_DMSO_200M_050219_2,16610,IAQMGSFIVF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16611 87.721 800.0 523320.0 25 0 42242.0 + 42919 VVQPLLVSV 9 190 477.3050022158841 952.5954514985682 2 477.3050109744072 MULTI CID FTMS 0 0 0 16599 279815.15625 0.3729333197056112 -1 0.1111602783203125 12 Unmodified _VVQPLLVSV_ ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4 61.357469665136826 0.0253304979873734 4 [{I|L}P]{I|L}VQVVSV 9 6 + 51.723 0.0 0.0 5.4296 5.4296 72.71 0.0 0.0 0.0 9.11115148484344 7.830145895351848 7.830145895351848 1.7339374311232802 0 1.0074908058443608 0.958607314841775 0.0 0.6989700043360187 [{I|L}P]{I|L}VQVVSV;[{I|L}P]{I|L}VVQVSV;[{I|L}P]{I|L}VN{I|L}VSV;[{I|L}P]{I|L}N{I|L}VVSV;[{I|L}P]{I|L}QVVVSV;[{I|L}P]V{I|L}QVVSV;[{I|L}P]{I|L}NV{I|L}VSV;VVQP{I|L}{I|L}VSV;[{I|L}P]V{I|L}N{I|L}VSV;[{I|L}P]V{I|L}VQVSV 5.4296;5.2476;5.2476;4.7441;4.6779;4.6524;4.562;4.4732;4.4704;4.4704 -;-;-;-;-;-;-;+;-;- + 1750 1 1.12 317244.9 0.9700000286102296 11633 4976 16599 HBL1_DMSO_200M_050219_2,16611 HBL1_DMSO_200M_050219_2,16611,VVQPLLVSV True True VVQPLLVSV 87.720682 477.305010974407 4896420.0 16599.0 ENSG00000115484|ENST00000394440|CCT4;;nc|ENSG00000115484|P50991-2|CCT4 2.926764686902364 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16612 87.728 388.0 229620.0 25 0 41024.0 + 11473 GIIADIKMV 9 111 480.2836708486973 958.5527887641946 2 480.2832214236259 MULTI CID FTMS 0 0 0 16599 216929.578125 0.4976765642344172 1 -0.1210250854492187 13 Unmodified _GIIADIKMV_ ENSG00000131370|ENST00000383791|SH3BP5;nc|ENSG00000131370|O60239-2|SH3BP5 36.12702656103203 0.0967173616627612 4 {[VA]|[{I|L}G]}{I|L}AD{I|L}KMV 9 0 + 62.094 0.0 0.0 6.4778 6.4778 89.359 0.0 0.0 0.0 23.49993446776488 9.966299270632035 9.966299270632035 11.792972196075128 0 0.7302046884880937 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}{I|L}AD{I|L}KMV;{[VA]|[{I|L}G]}{I|L}TCA{I|L}[R{I|L}];{[VA]|[{I|L}G]}EKM{I|L}[R{I|L}];{[VA]|[{I|L}G]}{I|L}[SG]M{I|L}[R{I|L}];[{I|L}A]VTCA{I|L}[R{I|L}];{[VA]|[{I|L}G]}{I|L}A[YG]PVAV;{[VA]|[{I|L}G]}{I|L}A[YG]PVG{I|L};{[VA]|[{I|L}G]}{I|L}A[R{M(Oxidation (M))|F}][PS]V;[{I|L}A]DKM{I|L}[R{I|L}];{[VA]|[{I|L}G]}[VS]AM{I|L}[R{I|L}] 6.4778;5.2476;4.8619;4.1032;3.8664;3.7094;3.6083;3.5077;3.4808;3.4805 +;-;-;-;-;-;-;-;-;- + 831 + 1 1.12 71860.7 1.0 11634 4976 16599 HBL1_DMSO_200M_050219_2,16612 HBL1_DMSO_200M_050219_2,16612,GIIADIKMV True True GIIADIKMV 87.727636 480.283221423626 3191202.75 16599.0 ENSG00000131370|ENST00000383791|SH3BP5;;nc|ENSG00000131370|O60239-2|SH3BP5 7.060464223225911 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16613 87.742 800.0 125940.0 25 0 29185.0 -1 0 70 1182.4978724390892 3544.471787917468 3 1182.830737292767 MULTI CID FTMS 0 0 0 16599 207427.28125 1.0 0 0.0 14 4 GYV 3 -1 13.188 0.0 0.0 0.37206 0.0 0.0 1972.67352239188 1249.5853975885375 3222.258919980418 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYV 0.37206 - 43 + 1 1.12 86227.3 0.800000011920929 11635 4976 16599 HBL1_DMSO_200M_050219_2,16613 HBL1_DMSO_200M_050219_2,16613, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16614 87.75 465.0 246270.0 25 0 26959.0 + 34827 SQFPGAITL 9 127 467.2557031428642 932.4968533525284 2 467.2551452517509 MULTI CID FTMS 0 0 0 16599 179339.09375 0.5998721619268323 3 -0.3766632080078125 15 Unmodified _SQFPGAITL_ ENST00000263083.10_1_17:1944800-1946395:+|nuORF;ENST00000571710.5_1_17:1945525-1946395:+|nuORF;nc|ENSG00000262664|Q8WZ82|OVCA2 47.74868867922204 0.0453060283459952 4 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L} 8 2 + 32.902 0.0 0.0 3.5284 3.5284 71.731 0.0 0.0 0.0 5.415698010518351 7.201074051859507 5.415698010518351 5.415698010518351 0 1.057902146726378 0.0 0.5891368308784531 0.5796896906561032 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]{I|L}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{[QS]|[NT]}{I|L}T{I|L};[QP]{I|L}QS{M(Oxidation (M))|F}T{I|L};[{I|L}T][QP]N{M(Oxidation (M))|F}T{I|L};{[QS]|[NT]}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T{I|L};[PG]A{I|L}QS{M(Oxidation (M))|F}T{I|L};[QP]{I|L}TN{M(Oxidation (M))|F}T{I|L};[QP]{M(Oxidation (M))|F}{[QS]|[NT]}{I|L}T{I|L};[PG]A{I|L}TN{M(Oxidation (M))|F}T{I|L};[PG]A{M(Oxidation (M))|F}{[QS]|[NT]}{I|L}T{I|L} 3.5284;2.9476;2.8678;2.6267;2.6257;2.5392;2.493;2.4233;2.1644;2.0947 -;-;-;-;-;-;-;-;-;- 737 1 1.12 90103.8 1.0 11636 4976 16599 HBL1_DMSO_200M_050219_2,16614 HBL1_DMSO_200M_050219_2,16614,SQFPGAITL True True SQFPGAITL 87.749734 467.255145251751 11318118.0 16599.0 ENST00000571710.5_1_17:1945525-1946395:+|nuORF;;ENST00000263083.10_1_17:1944800-1946395:+|nuORF;;nc|ENSG00000262664|Q8WZ82|OVCA2 7.02274735768636 2.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 16615 87.764 800.0 352300.0 25 0 43054.0 + 18495 KYNIMLVRL 9 140 383.8986465514111 1148.6741102544331 3 383.8986083865166 MULTI CID FTMS 0 0 0 16599 180276.28125 0.4180063914931579 -1 0.1111602783203125 16 Unmodified _KYNIMLVRL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 55.50274090549119 0.0285720310785888 4 [YK]N{I|L}M{I|L}{I|L}VR 9 2 [YK]N{I|L} + + 38.654 23.32 4.4995 3.3651 3.3651 46.831 0.0 0.0 0.0 0.0 15.334015987356471 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.2614393726401688 [YK]N{I|L}M{I|L}{I|L}VR 3.3651 - 297 + 1 1.12 223945.7 0.6600000262260437 11637 4976 16599 HBL1_DMSO_200M_050219_2,16615 HBL1_DMSO_200M_050219_2,16615,KYNIMLVRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16616 87.769 228.0 227730.0 25 0 20092.0 + 3377 AYQFFREAL 9 82 572.792850197111 1143.5711474610218 2 572.7938720583916 MULTI CID FTMS 0 0 0 16599 172482.078125 1.0 0 0.0 17 Unmodified _AYQFFREAL_ ENSG00000110583|ENST00000377793|NAA40;ENST00000338447.10_1_11:63714317-63721948:+|nuORF;ENST00000534965.5_1_11:63706554-63721948:+|nuORF;ENST00000544138.5_1_11:63714317-63721948:+|nuORF;ENST00000544194.5_1_11:63720210-63721948:+|nuORF;nc|ENSG00000110583|Q86UY6-3|NAA40;nc|ENSG00000110583|Q86UY6-4|NAA40 38.17557092003332 0.0854718145212029 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}[W{I|L}]G{I|L} 9 3 + 56.488 0.0 0.0 4.9396 4.9396 78.68 0.0 0.0 0.0 42.993041393512286 2.719932023307834 2.719932023307834 7.323937598229691 0 0.9247425010840048 2.0 0.0 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}[W{I|L}]G{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}[W{I|L}]AV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}[W{I|L}]G{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}[W{I|L}]AV 4.9396;4.2992;3.8015;3.161 -;-;-;- 99 + 1 1.12 46800.8 1.0 11638 4976 16599 HBL1_DMSO_200M_050219_2,16616 HBL1_DMSO_200M_050219_2,16616,AYQFFREAL True True AYQFFREAL 87.76934 572.793872058392 1515287.875 16599.0 ENST00000544194.5_1_11:63720210-63721948:+|nuORF;;ENSG00000110583|ENST00000377793|NAA40;;ENST00000544138.5_1_11:63714317-63721948:+|nuORF;;nc|ENSG00000110583|Q86UY6-4|NAA40;;nc|ENSG00000110583|Q86UY6-3|NAA40;;ENST00000534965.5_1_11:63706554-63721948:+|nuORF;;ENST00000338447.10_1_11:63714317-63721948:+|nuORF 6.514068126678467 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16617 87.783 800.0 100160.0 25 0 9008.8 -1 0 98 1029.831039667116 3086.471289601548 3 1030.496020495892 MULTI CID FTMS 0 0 0 16599 169104.703125 0.0873225954099335 10 -1.1743392944335938 18 4 [NP]{I|L}DW 5 -1 19.208 0.0 0.0 0.62233 0.0 0.0 0.0 2458.174938853754 2458.174938853754 3.0102999566398125 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}DW 0.62233 - 768 1 1.12 61843.1 0.6899999976158142 11639 4976 16599 HBL1_DMSO_200M_050219_2,16617 HBL1_DMSO_200M_050219_2,16617, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16618 87.79 381.0 325270.0 25 0 50794.0 + 36263 SYFEIPTKEF 10 121 630.8111761264588 1259.6077993197175 2 631.3137695193291 MULTI CID FTMS 0 0 0 16599 129208.953125 1.0 0 0.0 19 Unmodified _SYFEIPTKEF_ ENSG00000143702|ENST00000366542|CEP170;ENST00000502249.6_1_4:119401524-119435218:+|nuORF;nc|ENSG00000143702|Q5SW79-2|CEP170;nc|ENSG00000143702|Q5SW79-3|CEP170 38.61474834105838 0.1721950110283317 4 {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}E{I|L}PT{[TV]|[{I|L}S]}G{M(Oxidation (M))|F} 11 3 + 31.743 0.0 0.0 2.5201 2.5201 62.518 0.0 0.0 0.0 1.1936027378983596 1.1936027378983596 1.1936027378983596 1.1936027378983596 0 1.1989700043360187 0.0 0.3054621874040891 0.0 {[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}E{I|L}PT{[TV]|[{I|L}S]}G{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T][R{I|L}]{I|L}CE{M(Oxidation (M))|F}[MT];{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}E{I|L}[R{I|L}]EG{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T][R{I|L}]C{I|L}E{M(Oxidation (M))|F}[MT];{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}E{I|L}PT[YQ]{I|L};{[TV]|[{I|L}S]}[WH]P{I|L}E{M(Oxidation (M))|F}[MT];[KT]E[YV]{I|L}E{M(Oxidation (M))|F}[MT];[VP][EP]TP{I|L}E{M(Oxidation (M))|F}[MT];{[ET]|[MV]}[RH]P{I|L}E{M(Oxidation (M))|F}[MT];{[{M(Oxidation (M))|F}C]|[YS]}T[R{I|L}]{I|L}E{M(Oxidation (M))|F}[MT] 2.5201;2.4253;2.0387;1.8932;1.7954;1.7262;1.2694;0.91549;0.72618;0.66292 -;-;-;-;-;-;-;-;-;- 497 + 1 1.12 96428.4 1.0 11640 4976 16599 HBL1_DMSO_200M_050219_2,16618 HBL1_DMSO_200M_050219_2,16618,SYFEIPTKEF False True SYFEIPTKEF 87.790048 631.313769519329 1677240.625 16599.0 nc|ENSG00000143702|Q5SW79-3|CEP170;;ENSG00000143702|ENST00000366542|CEP170;;ENST00000502249.6_1_4:119401524-119435218:+|nuORF;;nc|ENSG00000143702|Q5SW79-2|CEP170 8.394235293070475 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16619 87.804 800.0 173900.0 25 0 41569.0 + -1 EMETRKEMQVL 11 123 713.3364427430846 1424.6583325529691 2 713.3362914919853 MULTI CID FTMS 0 0 0 16599 122647.171875 0.9570749381132097 -1 0.1111602783203125 20 2 Oxidation (M) _EM(Oxidation (M))ETRKEM(Oxidation (M))QVL_ REV__ENST00000592416.1_1_18:48722264-48722681:-|nuORF 18.1463463914782 0.6576820063886638 4 [YQ]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S]A{M(Oxidation (M))|F}Y 8 -1 41.024 0.0 0.0 2.8795 0.0 0.0 0.0 355.1986017643737 355.1986017643737 13.812733605149177 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.7302046884880937 1.774227503252014 [YQ]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))S]A{M(Oxidation (M))|F}Y 2.8795 - 986 1 1.12 103247.5 0.6200000047683716 11641 4976 16599 HBL1_DMSO_200M_050219_2,16619 HBL1_DMSO_200M_050219_2,16619,EMETRKEMQVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16621 87.81 155.0 551680.0 25 0 154520.0 -1 0 42 1173.1679619706183 3516.482056512056 3 1173.502856433392 MULTI CID FTMS 0 0 0 16620 889708.5 0.0583696502761723 3 -0.3434295654296875 1 4 G{M(Oxidation (M))|F}{I|L} 3 -1 13.188 0.0 0.0 0.37502 0.0 0.0 1943.6649921583432 1252.6120089166627 3196.277001075006 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L} 0.37502 - 53 + 1 1.12 80479.9 1.0 11642 4977 16620 HBL1_DMSO_200M_050219_2,16621 HBL1_DMSO_200M_050219_2,16621, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16622 87.811 43.0 1321300.0 25 0 129820.0 + + 24784 MPLLTPRYI 9 57 552.3179498314288 1102.6213467296575 2 552.3179809451103 MULTI CID FTMS 0 0 0 16620 1059552.0 0.6778875705545082 1 -0.1384963989257812 2 Unmodified _MPIIWLFAL_ nc|ENSG00000117153|Q53G59-2|KLHL12;ENSG00000117153|ENST00000367261|KLHL12 28.17323086031832 0.1727213568982648 4 MP{I|L}{I|L}T 5 -1 65.93 0.0 0.0 5.9794 0.0 0.0 0.0 544.2893063992007 544.2893063992007 38.48258770979733 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.4247425010840047 0.0 MP{I|L}{I|L}T 5.9794 - 44 + 1 1.12 51550.3 1.0 11643 4977 16620 HBL1_DMSO_200M_050219_2,16622 HBL1_DMSO_200M_050219_2,16622,MPIIWLFAL False False MPLLTPRYI 87.811371 552.31798094511 34768012.0 16620.0 nc|ENSG00000117153|Q53G59-2|KLHL12;;ENSG00000117153|ENST00000367261|KLHL12 4.400754610697429 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16623 87.813 62.0 781910.0 25 0 95717.0 + 19081 LDRLPFNV 8 70 487.2771687764737 972.5397846197476 2 487.2771179080009 MULTI CID FTMS 0 0 0 16620 1004331.125 0.8587476379400272 -2 0.2321853637695312 3 Unmodified _LDRLPFNV_ REV__ENSG00000036672|ENST00000260187|USP2;REV__nc|ENSG00000036672|O75604-2|USP2;REV__nc|ENSG00000036672|O75604-3|USP2;REV__nc|ENSG00000036672|O75604-4|USP2 20.453626601364224 0.6087503291685402 4 {M(Oxidation (M))|F}{I|L}NV 4 -1 37.423 0.0 0.0 3.8479 0.0 0.0 481.2651539533219 0.0 481.2651539533219 0.0 31.84955642535897 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}NV 3.8479 - 112 1 1.12 42689.6 1.0 11644 4977 16620 HBL1_DMSO_200M_050219_2,16623 HBL1_DMSO_200M_050219_2,16623,LDRLPFNV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16624 87.814 66.0 1253200.0 25 0 198650.0 45761 YYISPRLTF 9 63 580.3110719907387 1158.6075910482773 2 580.3112670779228 MULTI CID FTMS 0 0 0 16620 781173.75 0.0319901502899604 -2 0.2321853637695312 4 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 32.78568957990786 0.1150597335874693 4 YY{I|L}SP 5 4 64.068 0.0 0.0 5.5297 0.0 0.0 0.0 532.2911471002561 532.2911471002561 47.75698788007091 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + YY{I|L}SP 5.5297 + + 34 + 1 1.12 65580.5 1.0 11645 4977 16620 HBL1_DMSO_200M_050219_2,16624 HBL1_DMSO_200M_050219_2,16624,YYISPRLTF True True YYISPRITF 87.814475 580.311267077923 645344448.0 16620.0 nc|ENSG00000254087|P07948-2|LYN;;ENSG00000136573|ENST00000259089|BLK;;ENSG00000254087|ENST00000519728|LYN 2.8825151969989142 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16625 87.816 72.0 799390.0 25 0 137970.0 + 13706 HQLENLSNFI 10 65 607.8120124590596 1213.609471984919 2 607.8124267458916 MULTI CID FTMS 0 0 0 16620 774427.375 0.227354975867507 -1 0.1210250854492187 5 Unmodified _HQLENLSNFI_ ENSG00000064666|ENST00000263097|CNN2;ENST00000443067.1_1_1:166765603-166766044:+|nuORF;nc|ENSG00000064666|Q99439-2|CNN2 63.22749603027936 0.0281198777558511 4 [HQ]{I|L}EN{I|L}SN{M(Oxidation (M))|F}{I|L} 10 0 + 87.305 0.0 0.0 7.1938 7.1938 89.273 0.0 0.0 0.0 8.507112333562858 76.0676646604105 8.507112333562858 9.164539485499262 0 1.16944517631652 0.0 0.9247425010840048 1.1237125054200234 + + [HQ]{I|L}EN{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EN{I|L}SGG{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EGG{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EGG{I|L}SGG{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{M(Oxidation (M))|F}V]N{I|L}SN{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{M(Oxidation (M))|F}V]N{I|L}SGG{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{M(Oxidation (M))|F}V]GG{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}E[KA]DN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}[SG][{I|L}A]DN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}E[KA]DGG{M(Oxidation (M))|F}{I|L} 7.1938;6.4387;6.4387;5.6865;5.6709;4.9157;4.9157;4.49;3.8988;3.7349 +;-;-;-;-;-;-;-;-;- + 462 1 1.12 49868.1 1.0 11646 4977 16620 HBL1_DMSO_200M_050219_2,16625 HBL1_DMSO_200M_050219_2,16625,HQLENLSNFI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16626 87.818 74.0 520390.0 25 0 61740.0 + 23458 ATVVIGGVVAV 11 73 492.808205981318 983.601859029436 2 492.8083984255791 MULTI CID FTMS 0 0 0 16620 735281.6875 1.0 0 0.0 6 Unmodified _LTGNVLIVGV_ nc|ENSG00000165949|P40305-1|IFI27 25.399314129420983 0.3980215340001851 4 [{I|L}T]GV 4 6 20.93 0.0 0.0 2.1279 0.0 0.0 0.0 610.3569914359391 610.3569914359391 4.731975075880328 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.7742275032520141 0.0 [{I|L}T]GV 2.1279 - 357 1 1.12 35239.7 1.0 11647 4977 16620 HBL1_DMSO_200M_050219_2,16626 HBL1_DMSO_200M_050219_2,16626,LTGNVLIVGV False False ATVVIGGVVAV 87.817875 492.808398425579 7391727.0 16620.0 nc|ENSG00000165949|P40305-1|IFI27 5.095925410588582 2.0 False 11.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 16627 87.82 111.0 402740.0 25 0 65592.0 + 30754 RHLVVWKKMV 10 61 432.5975912181858 1294.7709442547575 3 432.5975524783134 MULTI CID FTMS 0 0 0 16620 355101.53125 0.5469051755646024 -1 0.1210250854492187 7 Unmodified _RHLVVWKKMV_ REV__ENST00000361763.8_1_11:118175656-118183365:+|nuORF 1.844237919475145 0.7181058121064529 4 V 1 -1 11.99 0.0 0.0 0.92601 0.0 0.0 1177.6914516173536 0.0 1177.6914516173536 0.0 2.525749891599532 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.92601 + + 12 + 1 1.12 50421.0 1.0 11648 4977 16620 HBL1_DMSO_200M_050219_2,16627 HBL1_DMSO_200M_050219_2,16627,RHLVVWKKMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16628 87.823 153.0 400200.0 25 0 31808.0 + 26290 NQVDDIRSFL 10 76 603.8094414743233 1205.6043300154463 2 603.8093139529228 MULTI CID FTMS 0 0 0 16620 324496.71875 0.905401580702056 -1 0.1210250854492187 8 Unmodified _NQVDDIRSFL_ ENSG00000116675|ENST00000371069|DNAJC6;nc|ENSG00000116675|O75061-3|DNAJC6;nc|ENSG00000116675|O75061-4|DNAJC6;nc|ENSG00000116675|O75061|DNAJC6 47.594388314883695 0.0942698883389255 4 GGQV[YV][WR]E{I|L} 10 7 + 47.387 0.0 0.0 3.9306 3.9306 64.01 0.0 0.0 0.0 0.4756946355447411 21.1890321533884 0.4756946355447411 0.2287874528033739 0 1.8252574989159955 1.3979400086720375 0.0 0.7742275032520141 GGQV[YV][WR]E{I|L};GGQV[YV][WR]QN;{[QN]|[E{I|L}]|[KN]}V[YV][WR]E{I|L};{[QN]|[E{I|L}]|[KN]}V[YV][WR]QN;{[TV]|[{I|L}S]}[HV]VVDDV[HS];[HS][{I|L}V]VVDDV[HS] 3.9306;3.9116;3.7231;3.7041;2.8137;2.5891 -;-;-;-;-;- 105 1 1.12 50134.8 1.0 11649 4977 16620 HBL1_DMSO_200M_050219_2,16628 HBL1_DMSO_200M_050219_2,16628,NQVDDIRSFL True True NQVDDIRSFL 87.823247 603.809313952923 3165006.0 16620.0 ENSG00000116675|ENST00000371069|DNAJC6;;nc|ENSG00000116675|O75061|DNAJC6;;nc|ENSG00000116675|O75061-4|DNAJC6;;nc|ENSG00000116675|O75061-3|DNAJC6 7.839628060658772 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16629 87.828 250.0 323050.0 25 0 25024.0 -1 0 108 644.9786324544743 1931.914067963623 3 645.3138305544853 MULTI CID FTMS 0 0 0 16620 269379.78125 0.8412675393117246 -1 0.1210250854492187 9 4 [NP]{I|L}NMT[HT]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q 13 -1 25.241 0.0 0.0 1.3065 0.0 0.0 0.0 460.1827614479818 460.1827614479818 -5.883218614967909 0.0 -5.883218614967909 0.0 0 0.0 0.6989700043360187 0.0 0.3807196863200844 [NP]{I|L}NMT[HT]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q 1.3065 - 1916 1 1.12 71794.7 1.0 11650 4977 16620 HBL1_DMSO_200M_050219_2,16629 HBL1_DMSO_200M_050219_2,16629, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16630 87.831 146.0 446560.0 25 0 69134.0 + 22626 LPYMRGFL 8 87 498.7713656568809 995.5281783805618 2 498.7711669802666 MULTI CID FTMS 0 0 0 16620 271230.5 1.0 0 0.0 10 Unmodified _LPYMRGFL_ ENSG00000118276|ENST00000306851|B4GALT6;nc|ENSG00000118276|Q9UBX8-2|B4GALT6 19.438996006549623 0.6237395211498085 4 {I|L}PY 3 5 45.234 0.0 0.0 4.5437 0.0 0.0 0.0 619.3035649758357 619.3035649758357 22.012087149992503 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.0 0.0 + {I|L}PY 4.5437 + + 51 + 1 1.12 52684.2 1.0 11651 4977 16620 HBL1_DMSO_200M_050219_2,16630 HBL1_DMSO_200M_050219_2,16630,LPYMRGFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16631 87.835 228.0 292990.0 25 0 40768.0 + 1187 AIAPIIAAV 9 97 419.77361318856777 837.5326734439356 2 419.7733947634697 MULTI CID FTMS 0 0 0 16620 269929.53125 0.4580274733391825 2 -0.2556381225585937 11 Unmodified _AIAPIIAAV_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 45.7499826716795 0.0496882803020414 4 [{I|L}P]{I|L}AA{I|L}E 7 5 37.668 0.0 0.0 4.4975 0.0 0.0 0.0 127.07128363364178 127.07128363364178 18.00266979497827 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}P]{I|L}AA{I|L}E 4.4975 - 411 1 1.12 56723.9 1.0 11652 4977 16620 HBL1_DMSO_200M_050219_2,16631 HBL1_DMSO_200M_050219_2,16631,AIAPIIAAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16632 87.849 800.0 297680.0 25 0 15571.0 -1 0 137 880.8986709399346 1759.7827889466691 2 881.3989135622978 MULTI CID FTMS 0 0 0 16620 232926.265625 0.8643149648847863 -1 0.1210250854492187 12 4 [KT]EY{M(Oxidation (M))|F}ANQQAED 12 -1 104.41 0.0 0.0 5.9331 0.0 0.0 0.0 332.1002291315063 332.1002291315063 68.27059561050407 0.0 0.0 0.0 0 0.3494850021680094 0.0 1.4361818737241734 2.571333751784365 [KT]EY{M(Oxidation (M))|F}ANQQAED 5.9331 - 5960 + 1 1.12 163551.4 0.9200000166893004 11653 4977 16620 HBL1_DMSO_200M_050219_2,16632 HBL1_DMSO_200M_050219_2,16632, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16633 87.863 800.0 322930.0 25 0 37881.0 + 42813 VVLDDKDYFL 10 163 613.8194243512869 1225.6242957693737 2 613.8193847537041 MULTI CID FTMS 0 0 0 16620 225800.015625 0.5439233343365282 -1 0.1210250854492187 13 Unmodified _VVLDDKDYFL_ ENSG00000115541|ENST00000233893|HSPE1;ENST00000465573.1_1_2:198365552-198367980:+|nuORF;ENST00000550617.1_1_12:102267096-102267252:-|nuORF 84.5221896805406 0.0133617038110099 4 VV{I|L}DNV{I|L}DD[QP] 11 6 + 95.055 0.0 0.0 7.7557 7.7557 87.92 0.0 0.0 0.0 44.9649503066709 2.349331312435212 2.349331312435212 6.296737145558268 0 0.6989700043360187 2.0 2.2416440611282624 0.1271595765414318 VV{I|L}DNV{I|L}DD[QP];VV{I|L}DNVD{I|L}D[QP];VV{I|L}DGGV{I|L}DD[QP];VV{I|L}DNY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L};VV{I|L}DGGVD{I|L}D[QP];VV{I|L}DDAAA{I|L}D[QP];VV{I|L}DWAA{I|L}D[QP];VV{I|L}DD{[NV]|[RG]}{I|L}D[QP];VV{I|L}DNV{I|L}[YE]Y;VV{I|L}DGGY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L} 7.7557;7.2419;7.0109;6.8037;6.4971;6.3686;6.3203;6.18;6.1493;6.0559 -;-;-;-;-;-;-;-;-;- 11656 + 1 1.12 189504.8 0.9300000071525574 11654 4977 16620 HBL1_DMSO_200M_050219_2,16633 HBL1_DMSO_200M_050219_2,16633,VVLDDKDYFL True True VVLDDKDYFL 87.862791 613.819384753704 2992490.25 16620.0 ENSG00000115541|ENST00000233893|HSPE1;;ENST00000465573.1_1_2:198365552-198367980:+|nuORF;;ENST00000550617.1_1_12:102267096-102267252:-|nuORF 4.14637557665507 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16634 87.87 405.0 190880.0 25 0 10256.0 -1 0 102 957.9237025428926 1913.832852152585 2 958.4267455935478 MULTI CID FTMS 0 0 0 16620 207822.4375 1.0 0 0.0 14 4 EA{I|L}D{I|L}Q[EP]YDC(Carbamidomethyl (C)){I|L} 12 -1 42.829 0.0 0.0 2.2379 0.0 0.0 449.2074381894975 0.0 449.2074381894975 0.0 29.130937864725155 0.0 0.0 0 0.0 0.0 0.0 0.0 EA{I|L}D{I|L}Q[EP]YDC(Carbamidomethyl (C)){I|L} 2.2379 - 1893 + 1 1.12 57793.7 1.0 11655 4977 16620 HBL1_DMSO_200M_050219_2,16634 HBL1_DMSO_200M_050219_2,16634, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16635 87.884 800.0 144660.0 25 0 37867.0 29155 QFLKLRKYSI 10 107 648.3935511402304 1294.7725493472608 2 648.3944579958916 MULTI CID FTMS 0 0 0 16620 200318.96875 0.5761174407586601 -1 0.1210250854492187 15 Unmodified _QFLKLRKYSI_ ENSG00000176907|ENST00000315792|TCIM 3.5964929083625545 0.7100006075494749 4 {I|L} 1 9 10.089 0.0 0.0 0.77918 0.0 0.0 1163.6777139974545 0.0 1163.6777139974545 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.77918 + + 40 + 1 1.12 108056.5 0.8600000143051147 11656 4977 16620 HBL1_DMSO_200M_050219_2,16635 HBL1_DMSO_200M_050219_2,16635,QFLKLRKYSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16636 87.899 800.0 170100.0 25 0 15743.0 + 36445 SYYPAENLIEY 11 141 681.3164915835314 1360.618430233863 2 681.3171874880791 MULTI CID FTMS 0 0 0 16620 194208.5625 0.7831191235813569 1 -0.1384963989257812 16 Unmodified _SYYPAENLIEY_ ENSG00000130024|ENST00000339209|PHF10;nc|ENSG00000130024|Q8WUB8-2|PHF10;nc|ENSG00000130024|Q8WUB8-3|PHF10 86.33184430468982 0.0029476721545555 4 [PA]EN{I|L}{I|L}Y{M(Oxidation (M))|F} 8 5 51.828 0.0 0.0 3.8092 0.0 0.0 0.0 410.1390350524752 410.1390350524752 25.876685311867647 0.0 0.0 0.0 0 0.3807196863200844 0.5528419686577808 0.8274509799928715 1.721848749616356 [PA]EN{I|L}{I|L}Y{M(Oxidation (M))|F} 3.8092 - 2958 1 1.12 106806.4 0.8700000047683716 11657 4977 16620 HBL1_DMSO_200M_050219_2,16636 HBL1_DMSO_200M_050219_2,16636,SYYPAENLIEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16637 87.909 578.0 143260.0 25 0 18276.0 -1 0 101 426.2391036604012 425.2318271938012 1 426.2368652224541 MULTI CID FTMS 0 0 0 -1 0 17 4 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3 -1 + 30.031 0.0 0.0 7.0624 7.0624 90.97 0.0 0.0 0.0 12.58411079317479 10.021824027012247 10.021824027012247 10.187592506070356 0 0.4247425010840047 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F} 7.0624;4.6666 -;- 27 + 1 1.12 76284.3 1.0 11658 4977 16620 HBL1_DMSO_200M_050219_2,16637 HBL1_DMSO_200M_050219_2,16637, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16638 87.923 800.0 169260.0 25 0 19888.0 + 5605 DPAASLPII 9 149 448.7593904878712 895.5042280425424 2 448.7578918337822 MULTI CID FTMS 0 0 0 16620 173817.515625 1.0 0 0.0 18 Unmodified _DPAASLPII_ ENSG00000164118|ENST00000503780|CEP44;nc|ENSG00000164118|Q9C0F1-2|CEP44 48.345845343767074 0.0439967357579942 4 [DP]AAS{I|L}P{I|L}{I|L} 9 0 + 41.67 0.0 0.0 4.6532 4.6532 69.415 0.0 0.0 0.0 1.6906747552871837 8.824995917031941 1.6906747552871837 1.6906747552871837 0 0.9929928190999392 0.7695510786217261 1.2396518287104437 0.0 + + [DP]AAS{I|L}P{I|L}{I|L};{[DA]|[EG]}PAS{I|L}P{I|L}{I|L};[PA]DAS{I|L}P{I|L}{I|L};[PA]ADS{I|L}P{I|L}{I|L};[{I|L}P]SAADP{I|L}{I|L};[{I|L}P][QT]DP{I|L}{I|L};[PA]ASD{I|L}P{I|L}{I|L};[DP][QT]{I|L}P{I|L}{I|L};[{I|L}P]{[DA]|[EG]}{[SA]|[TG]}P{I|L}{I|L};[DP]A{I|L}{[SA]|[TG]}P{I|L}{I|L} 4.6532;4.4644;4.2083;3.8721;3.6933;3.3503;3.1289;2.7734;2.5774;2.3309 +;-;-;-;-;-;-;-;-;- + 433 1 1.12 108056.8 0.6700000166893005 11659 4977 16620 HBL1_DMSO_200M_050219_2,16638 HBL1_DMSO_200M_050219_2,16638,DPAASLPII True True DPAASLPII 87.923128 448.757891833782 1846007.75 16620.0 nc|ENSG00000164118|Q9C0F1-2|CEP44;;ENSG00000164118|ENST00000503780|CEP44 3.5371145407358804 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16639 87.929 232.0 331230.0 25 0 32347.0 + 42104 VRKVLEKRIGD 11 107 438.2745572325306 1311.8018422977918 3 438.2739745974541 MULTI CID FTMS 0 0 0 16620 167597.8125 0.6475086973293177 8 -0.931060791015625 19 Unmodified _VRKVLEKRIGD_ REV__ENSG00000164961|ENST00000318410|WASHC5 8.155526934196011 0.8366696279279818 4 [RP]{I|L}VQ{I|L}A 7 -1 24.201 0.0 0.0 1.8448 0.0 0.0 0.0 531.2937605929668 531.2937605929668 13.363101941393394 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [RP]{I|L}VQ{I|L}A 1.8448 - 197 1 1.12 74977.7 1.0 11660 4977 16620 HBL1_DMSO_200M_050219_2,16639 HBL1_DMSO_200M_050219_2,16639,VRKVLEKRIGD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16640 87.942 800.0 227470.0 25 0 22943.0 + 43906 YFYDVEALRDY 11 155 727.3356123967286 1452.6566718602571 2 727.3361694216728 MULTI CID FTMS 0 0 0 16620 154314.796875 1.0 0 0.0 20 Unmodified _YFYDVEALRDY_ ENSG00000105341|ENST00000221943|DMAC2;ENST00000595407.1_1_19:41939391-41944316:-|nuORF;nc|ENSG00000105341|Q9NW81-2|DMAC2;nc|ENSG00000105341|Q9NW81-3|DMAC2;nc|ENSG00000105341|Q9NW81-4|DMAC2;nc|ENSG00000105341|Q9NW81-5|DMAC2;nc|ENSG00000105341|Q9NW81-6|DMAC2 64.9267550582149 0.0491502274424461 4 {NN|[MP]|[D{I|L}]|[EV]}SH{I|L}AEVDY{M(Oxidation (M))|F} 11 9 88.017 0.0 0.0 6.0591 0.0 0.0 0.0 160.03791696797262 160.03791696797262 44.5294889191339 0.0 0.0 0.0 0 1.0941876774005248 1.6989700043360187 1.7658715643802767 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}SH{I|L}AEVDY{M(Oxidation (M))|F} 6.0591 - 3431 1 1.12 129457.3 0.7799999713897705 11661 4977 16620 HBL1_DMSO_200M_050219_2,16640 HBL1_DMSO_200M_050219_2,16640,YFYDVEALRDY True True YFYDVEALRDY 87.94248 727.336169421673 1480969.25 16620.0 nc|ENSG00000105341|Q9NW81-4|DMAC2;;nc|ENSG00000105341|Q9NW81-5|DMAC2;;ENSG00000105341|ENST00000221943|DMAC2;;ENST00000595407.1_1_19:41939391-41944316:-|nuORF;;nc|ENSG00000105341|Q9NW81-6|DMAC2;;nc|ENSG00000105341|Q9NW81-3|DMAC2;;nc|ENSG00000105341|Q9NW81-2|DMAC2 8.669206460316977 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16642 87.947 12.0 4504100.0 25 0 387960.0 + 44847 YPPAPFMHI 9 74 536.7677958537712 1071.5210387743423 2 536.7681762576103 MULTI CID FTMS 0 0 0 16641 3847710.0 1.0 0 0.0 1 Unmodified _YPPAPFMHI_ ENSG00000143569|ENST00000428931|UBAP2L;ENST00000484819.1_1_1:154238957-154241481:+|nuORF;nc|ENSG00000143569|Q14157-3|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L 36.46614268402704 0.0948557732959553 4 YPPA{I|L}MM[H{I|L}] 9 2 + 68.421 0.0 0.0 6.3855 6.3855 86.543 0.0 0.0 0.0 39.2478773067036 5.253312076568903 5.253312076568903 9.191293077419758 0 0.3807196863200844 2.0 0.0 0.0 YPPA{I|L}MM[H{I|L}];YPPA{I|L}[YV]{[{M(Oxidation (M))|F}C]|[YS]};YPPA[KC][SG][H{I|L}];YP{I|L}[PA]MM[H{I|L}];YP{I|L}[PA][YV]{[{M(Oxidation (M))|F}C]|[YS]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MH[VS]{I|L}{[QN]|[E{I|L}]|[KN]};[PA][KC]M{I|L}AP{[QN]|[E{I|L}]|[KN]};[PA]P{M(Oxidation (M))|F}[KC]AP{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MH{I|L}[VS]{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PA][KC]AP{[QN]|[E{I|L}]|[KN]} 6.3855;5.5277;4.9165;4.7521;3.9646;2.9724;2.9334;2.4881;2.4594;2.3238 -;-;-;-;-;-;-;-;-;- 337 + 1 1.122 49468.7 1.0 11662 4978 16641 HBL1_DMSO_200M_050219_2,16642 HBL1_DMSO_200M_050219_2,16642,YPPAPFMHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16643 87.948 43.0 1736000.0 25 0 102540.0 -1 0 80 966.9640784805124 1931.913604027825 2 967.4675781130792 MULTI CID FTMS 0 0 0 16641 2197437.0 0.9093964765721784 1 -0.1171417236328125 2 4 [NP]{I|L}NAD{[RE]|[WV]}HMANNNP 15 -1 78.908 0.0 0.0 4.0844 0.0 0.0 0.0 241.0543821909468 241.0543821909468 34.522051942940294 0.0 0.0 0.0 0 0.4247425010840047 0.9208187539523752 0.75 1.0941876774005248 [NP]{I|L}NAD{[RE]|[WV]}HMANNNP 4.0844 - 2113 1 1.122 57290.8 1.0 11663 4978 16641 HBL1_DMSO_200M_050219_2,16643 HBL1_DMSO_200M_050219_2,16643, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16644 87.951 132.0 865120.0 25 0 49635.0 -1 0 122 973.972404501176 1945.930256069152 2 974.4753295779228 MULTI CID FTMS 0 0 0 16641 788087.5 0.7116106982581921 1 -0.1171417236328125 3 4 [MN][NP]{I|L}NEA[HT]ED{I|L}{I|L}T 15 -1 55.083 0.0 0.0 2.8307 0.0 0.0 0.0 250.11989771060783 250.11989771060783 -12.871091726809324 0.0 -12.871091726809324 0.0 0 0.6237125054200234 1.5228787452803376 1.174742501084005 0.0 [MN][NP]{I|L}NEA[HT]ED{I|L}{I|L}T 2.8307 - 17846 + 1 1.122 78998.7 1.0 11664 4978 16641 HBL1_DMSO_200M_050219_2,16644 HBL1_DMSO_200M_050219_2,16644, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16645 87.952 39.0 1017900.0 25 0 81884.0 + 38276 TPYWMAPEV 9 82 547.2535785490691 1092.492604164938 2 547.2550536990166 MULTI CID FTMS 0 0 0 16641 734214.0 0.6712562089101117 1 -0.1171417236328125 4 Unmodified _TPYWMAPEV_ ENSG00000011566|ENST00000263881|MAP4K3;ENSG00000012983|ENST00000682126|MAP4K5;ENSG00000065613|ENST00000369755|SLK;ENSG00000071054|ENST00000324219|MAP4K4;ENSG00000072786|ENST00000176763|STK10;ENSG00000077264|ENST00000372007|PAK3;ENSG00000101349|ENST00000353224|PAK5;ENSG00000104814|ENST00000396857|MAP4K1;ENSG00000123572|ENST00000243300|NRK;ENSG00000135090|ENST00000392533|TAOK3;ENSG00000137843|ENST00000560346|PAK6;ENSG00000141503|ENST00000355280|MINK1;ENSG00000149269|ENST00000356341|PAK1;ENSG00000149930|ENST00000308893|TAOK2;ENSG00000154310|ENST00000436636|TNIK;ENSG00000160551|ENST00000261716|TAOK1;ENSG00000168067|ENST00000294066|MAP4K2;ENSG00000176601|ENST00000392915|MAP3K19;ENSG00000180370|ENST00000327134|PAK2;ENST00000476609.1_1_2:102441885-102476398:+|nuORF;ENST00000572330.5_1_17:4736842-4793277:+|nuORF;ENST00000577583.1_1_17:27807410-27838022:+|nuORF;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;nc|ENSG00000011566|Q8IVH8-3|MAP4K3;nc|ENSG00000065613|Q9H2G2-2|SLK;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000077264|O75914-3|PAK3;nc|ENSG00000077264|O75914-4|PAK3;nc|ENSG00000077264|O75914|PAK3;nc|ENSG00000104814|Q92918|MAP4K1;nc|ENSG00000137843|Q9NQU5-2|PAK6;nc|ENSG00000141503|Q8N4C8-2|MINK1;nc|ENSG00000141503|Q8N4C8-3|MINK1;nc|ENSG00000141503|Q8N4C8-4|MINK1;nc|ENSG00000141503|Q8N4C8-5|MINK1;nc|ENSG00000149269|Q13153-2|PAK1;nc|ENSG00000149930|Q9UL54-2|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2;nc|ENSG00000154310|Q9UKE5-2|TNIK;nc|ENSG00000154310|Q9UKE5-3|TNIK;nc|ENSG00000154310|Q9UKE5-4|TNIK;nc|ENSG00000154310|Q9UKE5-5|TNIK;nc|ENSG00000154310|Q9UKE5-6|TNIK;nc|ENSG00000154310|Q9UKE5-7|TNIK;nc|ENSG00000154310|Q9UKE5-8|TNIK;nc|ENSG00000160551|Q7L7X3-2|TAOK1;nc|ENSG00000160551|Q7L7X3-3|TAOK1;nc|ENSG00000168067|Q12851-2|MAP4K2;nc|ENSG00000176601|Q56UN5-3|MAP3K19;nc|ENSG00000176601|Q56UN5-4|MAP3K19;nc|ENSG00000176601|Q56UN5-5|MAP3K19;nc|ENSG00000176601|Q56UN5-7|MAP3K19 64.23631603340823 0.0237365939569086 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TWMA 6 5 40.909 0.0 0.0 3.7446 0.0 0.0 0.0 340.1526132804256 340.1526132804256 9.389042093317048 0.0 0.0 0.0 0 1.0 1.0969100130080565 1.2059771852360797 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TWMA 3.7446 - 219 1 1.122 38958.3 1.0 11665 4978 16641 HBL1_DMSO_200M_050219_2,16645 HBL1_DMSO_200M_050219_2,16645,TPYWMAPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16646 87.953 39.0 1373500.0 25 0 170830.0 + 19803 LGTPVQTPSL 10 78 506.7876962683274 1011.5608396034548 2 506.7868224978447 MULTI CID FTMS 0 0 0 16641 743369.6875 0.717897387019533 -3 0.3706817626953125 5 Unmodified _LGTPVQTPSL_ REV__ENSG00000149679|ENST00000279101|CABLES2 20.453626601364224 0.5043500229302764 4 [PA]D{I|L}{I|L}A 6 -1 26.541 0.0 0.0 2.6238 0.0 0.0 0.0 428.2150503790986 428.2150503790986 -6.646419755561261 0.0 -6.646419755561261 0.0 0 0.0 0.8538719643217619 0.0 0.0 [PA]D{I|L}{I|L}A 2.6238 - 318 1 1.122 47583.9 1.0 11666 4978 16641 HBL1_DMSO_200M_050219_2,16646 HBL1_DMSO_200M_050219_2,16646,LGTPVQTPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16647 87.958 255.0 426940.0 25 0 33095.0 + 30844 RILDIDNVDL 10 113 593.3273363505159 1184.6401197678315 2 593.3278076052666 MULTI CID FTMS 0 0 0 16641 399910.15625 1.0 0 0.0 6 Unmodified _RILDIDNVDL_ ENSG00000104980|ENST00000270538|TIMM44;ENST00000598968.5_1_19:7992074-7996707:-|nuORF 57.24910588100465 0.0438022649904578 4 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}DNVD{I|L} 10 2 + 80.896 0.0 0.0 6.8287 6.8287 87.957 0.0 0.0 0.0 12.230749808046326 16.53212513775344 12.230749808046326 9.164539485499247 0 0.5 1.6989700043360187 0.5484550065040282 1.579689690656103 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}DNVD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}DGGVD{I|L};[R{I|L}]{I|L}D{I|L}DNVD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}DRGD{I|L};[R{I|L}]{I|L}D{I|L}DGGVD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}D[VG]GD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}][RD]AVD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}DQ{[CP]|[EA]}{I|L};[R{I|L}]{I|L}D{I|L}D[VG]GD{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}][RD]{I|L}GD{I|L} 6.8287;6.0551;5.7963;5.7305;5.0227;4.9569;4.8465;4.0287;3.9244;3.7482 -;-;+;-;-;-;-;-;-;- + 638 1 1.122 85404.9 1.0 11667 4978 16641 HBL1_DMSO_200M_050219_2,16647 HBL1_DMSO_200M_050219_2,16647,RILDIDNVDL True True RILDIDNVDL 87.958049 593.327807605267 3046297.25 16641.0 ENSG00000104980|ENST00000270538|TIMM44;;ENST00000598968.5_1_19:7992074-7996707:-|nuORF 6.309163093566895 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16648 87.96 114.0 457780.0 25 0 36450.0 + 19454 LFEGVLKDL 9 77 517.3009438605685 1032.587334787937 2 517.2999755740166 MULTI CID FTMS 0 0 0 16641 379861.8125 0.1664886580526385 2 -0.2049331665039062 7 Unmodified _LFEGVLKDL_ REV__ENSG00000065427|ENST00000302445|KARS1;REV__nc|ENSG00000065427|Q15046-2|KARS1 25.399314129420983 0.2080152500878129 4 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{I|L}K{I|L}EV 9 -1 + 46.995 0.0 0.0 4.5512 4.5512 66.684 0.0 0.0 0.0 0.4575749056067479 12.108157047234428 0.4575749056067479 0.4575749056067479 0 0.6694451763165201 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{I|L}K{I|L}EV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}GVK{I|L}EV;{[VA]|[{I|L}G]}D{M(Oxidation (M))|F}{I|L}K{I|L}EV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}RK{I|L}EV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}KR{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EGVK{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}G[K{I|L}]{M(Oxidation (M))|F}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[RK]{M(Oxidation (M))|F}{I|L}EV;{[VA]|[{I|L}G]}D[K{I|L}]{M(Oxidation (M))|F}{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ERK{I|L}EV 4.5512;4.5069;4.3406;4.171;4.05;3.98;3.951;3.7857;3.7403;3.6441 -;-;-;-;-;-;-;-;-;- 347 1 1.122 46938.0 1.0 11668 4978 16641 HBL1_DMSO_200M_050219_2,16648 HBL1_DMSO_200M_050219_2,16648,LFEGVLKDL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16649 87.962 93.0 531870.0 25 0 95310.0 22743 LQLFRGDTV 9 92 524.7936648649469 1047.5727767966937 2 524.7934448122978 MULTI CID FTMS 0 0 0 16641 374128.1875 1.0 0 0.0 8 Unmodified _LQLFRGDTV_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF 20.453626601364224 0.2830276176381075 4 [Q{I|L}]{I|L} 3 6 14.749 0.0 0.0 1.408 0.0 0.0 0.0 690.322110863353 690.322110863353 -0.5558471418748905 0.0 -0.5558471418748905 0.0 0 0.3494850021680094 0.0 0.0 0.3807196863200844 + [Q{I|L}]{I|L} 1.408 + + 92 1 1.122 44216.4 1.0 11669 4978 16641 HBL1_DMSO_200M_050219_2,16649 HBL1_DMSO_200M_050219_2,16649,LQLFRGDTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16650 87.966 158.0 472790.0 25 0 64560.0 + 9190 FGGVLILIHR 10 81 375.5693297980315 1123.6861599942945 3 375.5692932009697 MULTI CID FTMS 0 0 0 16641 331351.9375 0.0115774181987773 -8 0.94024658203125 9 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 30.63653989081413 0.2803493085145199 4 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 86.846 0.0 0.0 7.7287 7.7287 91.332 0.0 0.0 0.0 69.39896278884483 20.215299873086607 20.215299873086607 9.208187539523747 0 0.6989700043360187 2.0 0.0 0.5242275032520141 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 7.7287;6.9092 -;- 91 + 1 1.122 66760.2 1.0 11670 4978 16641 HBL1_DMSO_200M_050219_2,16650 HBL1_DMSO_200M_050219_2,16650,FGGVLILIHR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16651 87.969 183.0 465780.0 25 0 53828.0 + 34394 SLVAQLAAAQL 11 123 542.8205584574885 1083.6265639817768 2 543.3198730349541 MULTI CID FTMS 0 0 0 16641 313873.84375 0.1322772650207682 2 -0.2049331665039062 10 Unmodified _SLVAQLAAAQL_ ENSG00000121440|ENST00000263666|PDZRN3;nc|ENSG00000121440|Q9UPQ7-2|PDZRN3;nc|ENSG00000121440|Q9UPQ7-3|PDZRN3 24.020572477871973 0.5281922720044371 4 {[TV]|[{I|L}S]}{I|L}RN{I|L}EQ 8 7 50.883 0.0 0.0 4.6957 0.0 0.0 0.0 127.07321368035504 127.07321368035504 33.576315990684265 0.0 0.0 0.0 0 0.0 2.0 0.6549471895720984 0.0 {[TV]|[{I|L}S]}{I|L}RN{I|L}EQ 4.6957 - 2476 1 1.122 71901.4 1.0 11671 4978 16641 HBL1_DMSO_200M_050219_2,16651 HBL1_DMSO_200M_050219_2,16651,SLVAQLAAAQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16652 87.973 184.0 291270.0 25 0 30942.0 + 17918 KQVEEIFNL 9 90 560.3060224624597 1118.5974919917194 2 560.3049194216728 MULTI CID FTMS 0 0 0 16641 318912.03125 0.0931138310136776 3 -0.39959716796875 11 Unmodified _KQVEEIFNL_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 26.268140514670165 0.1969607489560049 4 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L}{M(Oxidation (M))|F}N{I|L} 9 2 + 49.759 0.0 0.0 4.4484 4.4484 76.985 0.0 0.0 0.0 7.456903350432924 3.1677903326085755 3.1677903326085755 7.456903350432924 0 0.7429928190999391 1.0969100130080565 0.4247425010840047 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]E{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}VR{M(Oxidation (M))|F}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KEE{M(Oxidation (M))|F}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}AA{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WR]R{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]E{M(Oxidation (M))|F}{I|L}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}V[VG]{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}AA{M(Oxidation (M))|F}{I|L}N{I|L};[KA][VG]EE{I|L}{M(Oxidation (M))|F}N{I|L} 4.4484;3.7818;3.5834;3.5304;3.3851;3.0043;2.8638;2.7602;2.4672;2.4621 -;-;-;-;-;-;-;-;-;- 319 1 1.122 46137.7 1.0 11672 4978 16641 HBL1_DMSO_200M_050219_2,16652 HBL1_DMSO_200M_050219_2,16652,KQVEEIFNL False True KQVEEIFNL 87.972728 560.304919421673 26093760.0 16641.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 2.62254544099172 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16653 87.976 159.0 513370.0 25 0 47460.0 + 31565 KTFNLIPAV 9 104 501.3010712281281 1000.5875895230562 2 501.8036682009697 MULTI CID FTMS 0 0 0 16641 283943.90625 0.556220258252761 -2 0.259521484375 12 Unmodified _RQLLAKCGL_ chr19:10258685-10259838|11|29.64|0.48|5.95|+|2|MRPL4,None|1;ENST00000590702.1_1_19:10369168-10369411:+|nuORF;ENSG00000105364|ENST00000253099|MRPL4;nc|ENSG00000105364|Q9BYD3-2|MRPL4 30.22481116460888 0.1466181017706357 4 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KTWAV 8 6 + 45.385 0.0 0.0 4.5358 4.5358 50.653 0.0 0.0 0.0 6.989700043360188 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.8494850021680094 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KTWAV;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KTWG{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}KT{[QD]|[EN]|[WG]|[KD]|[RS]};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}K{[QC]|[C(Carbamidomethyl (C))A]}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}K[MN]V;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}KT{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}K{I|L}T{[QD]|[EN]|[WG]|[KD]|[RS]};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}K{I|L}[MN]V;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}K{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[KT]{I|L}WG{I|L} 4.5358;4.5358;4.4078;3.7335;3.7335;3.4396;3.1387;2.4644;2.4644;2.2559 -;-;-;-;-;-;-;-;-;- 507 + 1 1.122 66803.2 1.0 11673 4978 16641 HBL1_DMSO_200M_050219_2,16653 HBL1_DMSO_200M_050219_2,16653,RQLLAKCGL False False KTFNLIPAV 87.975853 501.80366820097 8167745.5 16641.0 chr19:10258685-10259838|11|29.64|0.48|5.95|+|2|MRPL4,None|1;;ENST00000590702.1_1_19:10369168-10369411:+|nuORF;;ENSG00000105364|ENST00000253099|MRPL4;;nc|ENSG00000105364|Q9BYD3-2|MRPL4 3.673508644104004 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16654 87.99 800.0 222520.0 25 0 15545.0 + 45073 YPYHLSDIMV 10 172 619.2999636183504 1236.5853743035009 2 619.2994262576103 MULTI CID FTMS 0 0 0 16641 231559.875 0.50919981948971 1 -0.1171417236328125 13 Unmodified _YPYHLSDIMV_ ENSG00000176853|ENST00000334705|FAM91A1;ENST00000454544.2_1_1:147907560-147907839:+|nuORF 71.13359017698441 0.0189001043006994 4 {[TV]|[{I|L}S]}DH{I|L}{M(Oxidation (M))|F}Y{I|L}MV 10 5 + 66.468 0.0 0.0 5.3752 5.3752 71.682 0.0 0.0 0.0 6.383126090256681 6.383126090256681 6.383126090256681 1.249387366082999 0 0.5 0.6777807052660807 1.0356668758921828 0.0 {[TV]|[{I|L}S]}DH{I|L}{M(Oxidation (M))|F}Y{I|L}MV;{[TV]|[{I|L}S]}DHYPY{I|L}MV;{[TV]|[{I|L}S]}DH{I|L}Y{M(Oxidation (M))|F}{I|L}MV;YVV{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}VYMV;{[TV]|[{I|L}S]}DH{I|L}{M(Oxidation (M))|F}{I|L}YMV;YVVDD{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}MV;{[TV]|[{I|L}S]}DHY{I|L}{M(Oxidation (M))|F}{I|L}MV;YVVY{M(Oxidation (M))|F}{I|L}HEAP;{[TV]|[{I|L}S]}DHYP{I|L}YMV;YVVYPYHEAP 5.3752;5.2741;4.8847;4.859;4.8238;4.8052;4.7837;4.7403;4.7228;4.6392 -;-;-;-;-;-;-;-;-;- 11729 1 1.122 128824.9 1.0 11674 4978 16641 HBL1_DMSO_200M_050219_2,16654 HBL1_DMSO_200M_050219_2,16654,YPYHLSDIMV True True YPYHLSDIMV 87.989697 619.29942625761 10380617.0 16641.0 ENST00000454544.2_1_1:147907560-147907839:+|nuORF;;ENSG00000176853|ENST00000334705|FAM91A1 5.395238717397054 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16655 87.995 260.0 586930.0 25 0 59933.0 12604 GVIPRVIQL 9 147 497.8245900119126 993.6346270906251 2 497.8244506716728 MULTI CID FTMS 0 0 0 16641 228740.203125 0.5548673196289385 1 -0.1171417236328125 14 Unmodified _GVIPRVIQL_ ENSG00000090889|ENST00000374403|KIF4A;nc|ENSG00000090889|O95239-2|KIF4A 28.486842064014134 0.1687311288560894 4 P{M(Oxidation (M))|F}T{I|L} 4 7 26.564 0.0 0.0 2.6734 0.0 0.0 163.1318716336761 369.2267244928344 532.3585961265105 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.7134679910804405 0.0 P{M(Oxidation (M))|F}T{I|L} 2.6734 - 510 + 1 1.122 118178.1 1.0 11675 4978 16641 HBL1_DMSO_200M_050219_2,16655 HBL1_DMSO_200M_050219_2,16655,GVIPRVIQL False True YPFTLRVV 87.994509 497.824450671673 1441153.0 16641.0 ENSG00000170832|ENST00000300896|USP32;;nc|ENSG00000129204|P35125-2|USP6;;ENSG00000129204|ENST00000574788|USP6;;ENST00000575709.5_1_17:5042349-5076270:+|nuORF 2.993831793467204 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16656 88.008 800.0 183610.0 25 0 23402.0 14745 ILDAIEAKKRR 11 168 656.9082032892762 1311.8018536453524 2 656.9066039919853 MULTI CID FTMS 0 0 0 16641 219532.40625 1.0 0 0.0 15 Unmodified _ILDAIEAKKRR_ ENSG00000101109|ENST00000372806|STK4;ENST00000372801.5_1_20:43681806-43703814:+|nuORF 13.042465956692816 0.7638483625850725 4 [{I|L}T]TP{I|L}DN[{I|L}T]MN 11 9 35.714 0.0 0.0 2.7225 0.0 0.0 0.0 95.17460369744882 95.17460369744882 7.9395542842626305 0.0 0.0 0.0 0 0.0 2.0 0.3296896906561032 0.7302046884880937 [{I|L}T]TP{I|L}DN[{I|L}T]MN 2.7225 - 5359 1 1.122 120996.8 0.9700000286102296 11676 4978 16641 HBL1_DMSO_200M_050219_2,16656 HBL1_DMSO_200M_050219_2,16656,ILDAIEAKKRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16657 88.022 800.0 437640.0 25 0 56650.0 + 43959 YGYEHILTL 9 204 554.7870472762346 1107.559541619269 2 554.7869750857353 MULTI CID FTMS 0 0 0 16641 199169.640625 0.3555591191518836 -2 0.259521484375 16 Unmodified _YGYEHILTL_ ENSG00000139719|ENST00000267199|VPS33A 100.37149154755038 0.0107586824602606 4 {[YC]|[HE]}YGY{I|L}{I|L}T{I|L} 9 3 + 64.738 0.0 0.0 5.8451 5.8451 72.629 0.0 0.0 0.0 0.6579487057599209 9.043162181802202 0.6579487057599209 0.6579487057599209 0 0.5 0.0 1.4154855311450611 0.0 {[YC]|[HE]}YGY{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}HYGY{I|L}T{I|L};[TP]{[QC]|[C(Carbamidomethyl (C))A]}GY{I|L}{I|L}T{I|L};{[YC]|[HE]}YGY{I|L}T{I|L}{I|L};{[YC]|[HE]}YG{I|L}Y{I|L}T{I|L};[YG]YEH{I|L}{I|L}T{I|L};[{I|L}T]{M(Oxidation (M))|F}[C(Carbamidomethyl (C))Q]{I|L}{I|L}T{I|L};[H{I|L}]EYGY{I|L}T{I|L};{[YC]|[HE]}Y{I|L}GY{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}HYGYT{I|L}{I|L} 5.8451;5.7857;5.5888;5.3423;5.3373;5.3112;5.2887;5.1622;5.0655;5.0353 -;-;-;-;-;+;-;-;-;- + 7194 1 1.122 264385.4 0.9200000166893004 11677 4978 16641 HBL1_DMSO_200M_050219_2,16657 HBL1_DMSO_200M_050219_2,16657,YGYEHILTL True True YGYEHILTL 88.022178 554.786975085735 4435687.5 16641.0 ENSG00000139719|ENST00000267199|VPS33A 5.807115236918132 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16658 88.037 800.0 266020.0 25 0 22014.0 + 24080 LYFLQKVAY 9 169 572.8235497324345 1143.6325465316688 2 572.8241454958916 MULTI CID FTMS 0 0 0 16641 193623.953125 1.0 0 0.0 17 Unmodified _LYFLQKVAY_ ENST00000044462.11_1_15:78832812-78834893:+|nuORF;ENST00000559082.5_1_15:78832772-78834893:+|nuORF 74.42276476219924 0.019389277360085 4 [Y{I|L}]{M(Oxidation (M))|F}{I|L}A{I|L}E{I|L}Y 9 4 + 59.792 0.0 0.0 5.2282 5.2282 70.625 0.0 0.0 0.0 10.784634594678266 13.505018913849652 10.784634594678266 0.9960752895140956 0 0.5 2.0 0.0 0.0 [Y{I|L}]{M(Oxidation (M))|F}{I|L}A{I|L}E{I|L}Y;[Y{I|L}]{M(Oxidation (M))|F}{I|L}Q[KG]{I|L}Y;[Y{I|L}]{M(Oxidation (M))|F}{I|L}AG[KG]{I|L}Y;[Y{I|L}]{M(Oxidation (M))|F}{I|L}A[RK]AY;[KQ]{I|L}{M(Oxidation (M))|F}VY{I|L}AY;[KQ]{I|L}{M(Oxidation (M))|F}VAY{I|L}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QKVY{I|L}AY;[KQ]V{I|L}{M(Oxidation (M))|F}Y{I|L}AY;[KQ]V{I|L}{M(Oxidation (M))|F}AY{I|L}Y;[KQ]{I|L}V{M(Oxidation (M))|F}Y{I|L}AY 5.2282;5.1411;5.0777;4.8691;4.2852;4.2355;4.2206;4.1184;4.0687;4.022 -;-;-;-;-;-;-;-;-;- 2351 1 1.122 159239.9 0.8500000238418579 11678 4978 16641 HBL1_DMSO_200M_050219_2,16658 HBL1_DMSO_200M_050219_2,16658,LYFLQKVAY True True LYFLQKVAY 88.037486 572.824145495892 1841860.875 16641.0 ENST00000044462.11_1_15:78832812-78834893:+|nuORF;;ENST00000559082.5_1_15:78832772-78834893:+|nuORF 6.262150287628174 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16659 88.041 172.0 409890.0 25 0 38935.0 + 25265 MVTSMMIQV 9 122 520.252820403263 1038.4910878733258 2 520.2540771365166 MULTI CID FTMS 0 0 0 16641 197405.640625 1.0 0 0.0 18 Unmodified _MVTSMMIQV_ ENSG00000167515|ENST00000696289|TRAPPC2L;ENST00000563514.1_1_16:88926246-88927364:+|nuORF;ENST00000565205.5_1_16:88925858-88927364:+|nuORF;ENST00000565504.5_1_16:88927163-88927364:+|nuORF;nc|ENSG00000167515|Q9UL33|TRAPPC2L 24.67388899826682 0.2172451872415813 4 {NN|[MP]|[D{I|L}]|[EV]}A 3 8 20.592 0.0 0.0 1.9829 0.0 0.0 0.0 736.3202559243601 736.3202559243601 6.612574872060009 0.0 0.0 0.0 0 0.0 1.154901959985743 0.1595680409956017 0.0 {NN|[MP]|[D{I|L}]|[EV]}A 1.9829 - 165 1 1.122 59096.6 1.0 11679 4978 16641 HBL1_DMSO_200M_050219_2,16659 HBL1_DMSO_200M_050219_2,16659,MVTSMMIQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16660 88.055 800.0 208820.0 25 0 7146.3 -1 0 141 958.9593834262616 1915.904213919323 2 959.958544909954 MULTI CID FTMS 0 0 0 16641 145324.078125 0.393427001544226 -4 0.5033721923828125 19 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SA{[CA]|SS}{[{M(Oxidation (M))|F}D]|MM}QDA{M(Oxidation (M))|F}YE[{I|L}P] 17 -1 + 81.598 0.0 0.0 4.259 4.259 66.172 0.0 0.0 0.0 8.63813215014784 49.38659976441524 8.63813215014784 0.7058107428570679 0 0.0 1.6989700043360187 0.9247425010840048 2.6395840698003004 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SA{[CA]|SS}{[{M(Oxidation (M))|F}D]|MM}QDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S[MN]{[{M(Oxidation (M))|F}D]|MM}QDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C(Carbamidomethyl (C))[TA]{[{M(Oxidation (M))|F}D]|MM}QDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SA{[CA]|SS}{[{M(Oxidation (M))|F}D]|MM}QW{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S[MN]{[{M(Oxidation (M))|F}D]|MM}QW{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C(Carbamidomethyl (C))[TA]{[{M(Oxidation (M))|F}D]|MM}QW{M(Oxidation (M))|F}YE[{I|L}P];[PA]{I|L}E[YV]{[{M(Oxidation (M))|F}D]|MM}QDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C(Carbamidomethyl (C))Q{[CP]|[EA]}M{[MS]|[{M(Oxidation (M))|F}A]}A{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C(Carbamidomethyl (C))Q{[CP]|[EA]}[WY]A{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}[WQ][NP]DA{M(Oxidation (M))|F}YE[{I|L}P] 4.259;4.2222;4.116;3.7255;3.6895;3.5834;3.2129;3.1879;3.1519;3.1297 -;-;-;-;-;-;-;-;-;- 12837 1 1.122 114218.7 0.7400000095367432 11680 4978 16641 HBL1_DMSO_200M_050219_2,16660 HBL1_DMSO_200M_050219_2,16660, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16661 88.06 196.0 689620.0 25 0 304650.0 26861 PCEDGGGG 8 73 346.1225150929467 690.2304772526934 2 346.1219665408134 MULTI CID FTMS 0 0 0 16641 143266.734375 0.1649297403667315 -2 0.259521484375 20 Unmodified _PCEDGGGG_ ENSG00000229544|ENST00000451024|NKX1-2 0.0 0.8243325171867699 4 V 1 8 10.797 0.0 0.0 1.5642 0.0 0.0 59.048732621512336 529.0912993256087 588.1400319471211 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 V 1.5642 - 2 + 1 1.122 110505.4 1.0 11681 4978 16641 HBL1_DMSO_200M_050219_2,16661 HBL1_DMSO_200M_050219_2,16661,PCEDGGGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16663 88.064 2.2 22931000.0 25 0 3443300.0 + 3002 AVIPRLVQL 9 68 504.8321147498242 1007.6496765664484 2 504.8325988650322 MULTI CID FTMS 0 0 0 16662 23914734.0 0.8492221975622098 1 -0.0877914428710937 1 Unmodified _AVIPRLVQL_ ENSG00000173801|ENST00000393931|JUP;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 48.345845343767074 0.0439967357579942 4 {[VA]|[{I|L}G]}{I|L} 3 6 33.557 0.0 0.0 3.3302 0.0 0.0 0.0 721.4375848518578 721.4375848518578 6.147255951564077 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 + {[VA]|[{I|L}G]}{I|L} 3.3302 + + 32 1 1.122 44328.6 1.0 11682 4979 16662 HBL1_DMSO_200M_050219_2,16663 HBL1_DMSO_200M_050219_2,16663,AVIPRLVQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16664 88.065 5.3 9204900.0 25 0 1361800.0 + 25593 NFIEKVEAL 9 75 531.7954326692338 1061.5763124052676 2 531.7957031130791 MULTI CID FTMS 0 0 0 16662 9784530.0 0.7971842929307825 1 -0.0877914428710937 2 Unmodified _NFIEKVEAL_ ENSG00000092201|ENST00000216297|SUPT16H 43.77239144664712 0.0547478964384323 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}V[PA]A{I|L} 10 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} + + 34.87 6.338 2.4273 3.2847 3.2847 46.638 0.0 0.0 0.0 0.0 17.927965835756435 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}V[PA]A{I|L} 3.2847 - 409 + 1 1.122 43438.5 1.0 11683 4979 16662 HBL1_DMSO_200M_050219_2,16664 HBL1_DMSO_200M_050219_2,16664,NFIEKVEAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16665 88.066 34.0 2080900.0 25 0 281730.0 + 5584 DMYLVPKL 8 70 489.76996419677096 977.525375460342 2 489.7703430056572 MULTI CID FTMS 0 0 0 16662 1393209.875 0.7501326196750391 1 -0.0877914428710937 3 Unmodified _DMYLVPKL_ ENSG00000186141|ENST00000334163|POLR3C 32.30548876998284 0.3644845974844379 4 [MD]Y{I|L}VPK{I|L} 8 0 + 66.288 0.0 0.0 6.7812 6.7812 89.97 0.0 0.0 0.0 54.8684179663918 8.580279240929187 8.580279240929187 10.041559597711569 0 1.2302046884880935 2.0 0.0 0.0 + + [MD]Y{I|L}VPK{I|L};[MD]Y{I|L}V{I|L}[KP] 6.7812;5.754 +;- + 51 + 1 1.122 60881.8 1.0 11684 4979 16662 HBL1_DMSO_200M_050219_2,16665 HBL1_DMSO_200M_050219_2,16665,DMYLVPKL False True DMYLVPKL 88.066456 489.770343005657 33863800.0 16662.0 ENSG00000186141|ENST00000334163|POLR3C 7.212264060974121 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16666 88.068 27.0 1300800.0 25 0 136200.0 + 16827 KIADFGWSV 9 50 511.7681566093315 1021.5217602854632 2 511.7686035037041 MULTI CID FTMS 0 0 0 16662 1370851.125 0.9891118239839128 -1 0.1171417236328125 4 Unmodified _KIADFGWSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;ENSG00000087586|ENST00000395915|AURKA;ENSG00000105146|ENST00000302804|AURKC;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000105146|Q9UQB9-2|AURKC;nc|ENSG00000105146|Q9UQB9-3|AURKC;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 21.53697664764585 0.2571576504437394 4 SV 2 7 31.211 0.0 0.0 3.0554 0.0 0.0 817.4103844083131 0.0 817.4103844083131 0.0 20.10213141451892 0.0 0.0 0 1.0 0.0 0.3252574989159953 0.0 + SV 3.0554 + + 24 + 1 1.122 34764.1 1.0 11685 4979 16662 HBL1_DMSO_200M_050219_2,16666 HBL1_DMSO_200M_050219_2,16666,KIADFGWSV False True KIADFGWSV 88.067635 511.768603503704 21308260.0 16662.0 nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;ENSG00000105146|ENST00000302804|AURKC;;nc|ENSG00000105146|Q9UQB9-2|AURKC;;nc|ENSG00000178999|Q96GD4-2|AURKB;;nc|ENSG00000105146|Q9UQB9-3|AURKC;;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;;ENSG00000087586|ENST00000395915|AURKA 3.842128038406372 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16667 88.069 38.0 1289100.0 25 0 230790.0 + 35908 SVNFVPPFSV 10 68 546.7879048489198 1091.5612567646394 2 546.7879516482353 MULTI CID FTMS 0 0 0 16662 989411.75 1.0 0 0.0 5 Unmodified _SVNFVPPFSV_ REV__ENST00000313552.10_1_2:242665744-242665876:+|nuORF 24.99096001346401 0.4071966087057876 4 [VS]ND{I|L}{M(Oxidation (M))|F}E[R{I|L}] 9 -1 + 88.548 0.0 0.0 8.1121 8.1121 92.072 0.0 0.0 0.0 65.87205316164642 13.89506772603255 13.89506772603255 9.208187539523747 0 1.1861818737241734 2.0 0.3807196863200844 1.0994850021680094 [VS]ND{I|L}{M(Oxidation (M))|F}E[R{I|L}];[VS]GGD{I|L}{M(Oxidation (M))|F}E[R{I|L}];[VS]ND{I|L}{M(Oxidation (M))|F}[W{I|L}]V;[VS]ND{I|L}{I|L}{[RE]|[WV]}{M(Oxidation (M))|F};[VS]ND{I|L}{I|L}[W{M(Oxidation (M))|F}]V;[VS]N[{M(Oxidation (M))|F}V]EE[R{I|L}];[VS]GGD{I|L}{I|L}{[RE]|[WV]}{M(Oxidation (M))|F};[VS]GGD{I|L}{M(Oxidation (M))|F}[W{I|L}]V;[VS]GG[{M(Oxidation (M))|F}V]EE[R{I|L}];[VS]GGD{I|L}{I|L}[W{M(Oxidation (M))|F}]V 8.1121;7.2685;6.3709;6.0706;5.8194;5.5354;5.2271;5.1382;4.6918;4.5867 -;-;-;-;-;-;-;-;-;- 105 + 1 1.122 42532.9 1.0 11686 4979 16662 HBL1_DMSO_200M_050219_2,16667 HBL1_DMSO_200M_050219_2,16667,SVNFVPPFSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16668 88.07 56.0 1215900.0 25 0 353350.0 + -1 VAAYSFCSL 9 87 509.2402601531311 1016.4659673730622 2 509.2408019900322 MULTI CID FTMS 0 0 0 16662 895842.25 0.5650926207812346 -1 0.1171417236328125 6 Carbamidomethyl (C) _VAAYSFC(Carbamidomethyl (C))SL_ REV__ENSG00000189181|ENST00000342623|OR14I1 16.942295170755138 0.3780752226737986 4 [Q{I|L}][DP]{I|L}P 6 -1 18.785 0.0 0.0 1.8481 0.0 0.0 0.0 350.0853670709594 350.0853670709594 2.358631114164784 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 [Q{I|L}][DP]{I|L}P 1.8481 - 64 + 1 1.122 61051.0 1.0 11687 4979 16662 HBL1_DMSO_200M_050219_2,16668 HBL1_DMSO_200M_050219_2,16668,VAAYSFCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16669 88.072 81.0 651220.0 25 0 102570.0 + 1633 ALMAAPLSL 9 69 451.75274496202985 901.4909369908596 2 451.7529174685478 MULTI CID FTMS 0 0 0 16662 805990.8125 0.0620593332872887 64 -6.842437744140625 7 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS 6 4 49.13 0.0 0.0 5.4498 0.0 0.0 0.0 312.1930803088855 312.1930803088855 30.18954998148708 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS 5.4498 - 267 1 1.122 50337.8 1.0 11688 4979 16662 HBL1_DMSO_200M_050219_2,16669 HBL1_DMSO_200M_050219_2,16669,ALMAAPLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16670 88.074 69.0 652100.0 25 0 58864.0 + 36836 TELGLELASL 10 87 523.2927293852522 0 523.2927123904228 PEAK CID FTMS 0 0 0 16662 389324.28125 1.0 0 0.0 8 Unmodified _TELGLELASL_ REV__ENSG00000139697|ENST00000602398|SBNO1;REV__nc|ENSG00000139697|A3KN83-2|SBNO1;REV__nc|ENSG00000139697|A3KN83-3|SBNO1;REV__nc|ENSG00000139697|A3KN83-4|SBNO1 36.12702656103203 0.1519005573994188 4 A{I|L}TA 4 -1 22.454 0.0 0.0 2.1496 0.0 0.0 460.2550599729584 225.08834253482652 685.343402507785 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9802046884880936 0.0 A{I|L}TA 2.1496 - 171 + 1 1.122 41052.5 1.0 11689 4979 16662 HBL1_DMSO_200M_050219_2,16670 HBL1_DMSO_200M_050219_2,16670,TELGLELASL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16671 88.08 321.0 485980.0 25 0 38316.0 + 18494 KYNIMLVRL 9 139 575.3444511184405 1148.6743493036809 2 575.3458740115166 MULTI CID FTMS 0 0 0 16662 381559.40625 0.1699746564479469 2 -0.2824554443359375 9 Unmodified _KYNIMLVRL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 57.24910588100465 0.0276051374632116 4 KYN{I|L}M{I|L}VR{I|L} 9 0 + 68.356 0.0 0.0 5.9509 5.9509 80.091 0.0 0.0 0.0 16.478174818886366 4.696607696568648 4.696607696568648 4.696607696568648 0 1.6906140654642814 0.0 0.0 0.6694451763165201 + + KYN{I|L}M{I|L}VR{I|L};KYN{I|L}M{I|L}V{I|L}R;KY{I|L}NM{I|L}VR{I|L};KYN{I|L}{I|L}MVR{I|L};KYGG{I|L}M{I|L}VR{I|L};KYN{I|L}M{I|L}[R{I|L}]V;KY{I|L}NM{I|L}V{I|L}R;KYN{I|L}{I|L}MV{I|L}R;KYGG{I|L}M{I|L}V{I|L}R;KY{I|L}N{I|L}MVR{I|L} 5.9509;5.542;5.3351;5.2313;5.1492;5.1074;4.9262;4.8224;4.7404;4.6155 +;-;-;-;-;-;-;-;-;- + 1056 + 1 1.122 120966.0 1.0 11690 4979 16662 HBL1_DMSO_200M_050219_2,16671 HBL1_DMSO_200M_050219_2,16671,KYNIMLVRL True True KYNIMLVRL 88.079565 575.345874011517 50498641.5 16662.0 nc|ENSG00000156261|P50990-2|CCT8;;nc|ENSG00000156261|P50990-3|CCT8;;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;;ENSG00000156261|ENST00000286788|CCT8 5.619807640711467 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16672 88.081 73.0 817600.0 25 0 96208.0 + 3940 DALLEQAMI 9 89 502.26073972145065 1002.5069265097012 2 502.2608520388603 MULTI CID FTMS 0 0 0 16662 369376.71875 0.4762015552783232 -1 0.1171417236328125 10 Unmodified _DALLEQAMI_ ENSG00000008838|ENST00000394128|MED24;ENST00000581054.1_1_17:38192365-38210656:-|nuORF;nc|ENSG00000008838|O75448-2|MED24 29.081581746732265 0.1611639662936252 4 {[DA]|[EG]}{I|L}{I|L}EQA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 9 0 + 32.647 0.0 0.0 3.2565 3.2565 73.398 0.0 0.0 0.0 1.1878068855544015 0.7133375178436623 0.7133375178436623 7.746907182741371 0 0.3807196863200844 1.154901959985743 0.0 0.0 + + {[DA]|[EG]}{I|L}{I|L}EQA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]AQQQPG{I|L};{[DA]|[EG]}{I|L}{I|L}E[AG]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]AQQQPAV;{[QN]|[E{I|L}]|[KN]}G{I|L}EQA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]A[AG]QQPG{I|L};[YV]A[AG]QQPAV;{[QN]|[E{I|L}]|[KN]}G{I|L}E[AG]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[QA][WR]QA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]A{[HG]|PP}T{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 3.2565;2.4837;2.338;2.0868;1.9799;1.5652;1.1683;1.0613;0.15379;0.070657 +;-;-;-;-;-;-;-;-;- + 293 1 1.122 54686.7 1.0 11691 4979 16662 HBL1_DMSO_200M_050219_2,16672 HBL1_DMSO_200M_050219_2,16672,DALLEQAMI False True DALLEQAMI 88.081263 502.26085203886 14472188.0 16662.0 nc|ENSG00000008838|O75448-2|MED24;;ENSG00000008838|ENST00000394128|MED24;;ENST00000581054.1_1_17:38192365-38210656:-|nuORF 4.753190676371257 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16673 88.084 142.0 483850.0 25 0 38982.0 + -1 ISRELFCGEM 10 87 600.7730605866838 1199.5315682401674 2 600.7734863162041 MULTI CID FTMS 0 0 0 16662 346001.21875 0.5804345694959432 -1 0.1171417236328125 11 Oxidation (M) _ISRELFCGEM(Oxidation (M))_ REV__ENST00000607670.1_1_1:6454018-6454348:+|nuORF 8.745405648335112 0.6861838735306406 4 D{I|L}{M(Oxidation (M))|F}D[RP]V 7 -1 40.718 0.0 0.0 3.3945 0.0 0.0 339.0903708864602 0.0 339.0903708864602 0.0 27.95375982477598 0.0 0.0 0 1.424742501084005 0.0 0.3494850021680094 0.0 D{I|L}{M(Oxidation (M))|F}D[RP]V 3.3945 - 79 + 1 1.122 52223.7 1.0 11692 4979 16662 HBL1_DMSO_200M_050219_2,16673 HBL1_DMSO_200M_050219_2,16673,ISRELFCGEM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16674 88.087 113.0 334310.0 25 0 48226.0 + 9106 FFNLTVKEM 9 71 564.7901477354502 1127.5657425377003 2 564.7912475466728 MULTI CID FTMS 0 0 0 16662 342851.53125 0.735514100016921 1 -0.0877914428710937 12 Unmodified _FFNLTVKEM_ ENSG00000112984|ENST00000394894|KIF20A;nc|ENSG00000112984|O95235-2|KIF20A 19.361941925380144 0.3125782356748823 4 {M(Oxidation (M))|F}SA{I|L}YYV{M(Oxidation (M))|F} 8 6 45.042 0.0 0.0 3.9946 0.0 0.0 119.07396895576328 0.0 119.07396895576328 0.0 14.59183145787911 0.0 0.0 0 0.7429928190999391 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}SA{I|L}YYV{M(Oxidation (M))|F} 3.9946 - 157 1 1.122 38392.0 1.0 11693 4979 16662 HBL1_DMSO_200M_050219_2,16674 HBL1_DMSO_200M_050219_2,16674,FFNLTVKEM False True FFNLTVKEM 88.08651 564.791247546673 7981742.0 16662.0 nc|ENSG00000112984|O95235-2|KIF20A;;ENSG00000112984|ENST00000394894|KIF20A 3.593829790751139 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16675 88.09 167.0 494640.0 25 0 56952.0 + 2295 AQIDSIVEL 9 114 494.2708768902685 986.527200847337 2 494.2716247439384 MULTI CID FTMS 0 0 0 16662 324663.03125 0.9591528869215694 1 -0.0877914428710937 13 Unmodified _AQIDSIVEL_ ENSG00000135108|ENST00000622495|FBXO21;ENST00000549689.5_1_12:117612134-117624310:-|nuORF;nc|ENSG00000135108|O94952|FBXO21 32.037481411007896 0.1235546156350648 4 [VS]EAQ{I|L} 6 7 38.822 0.0 0.0 3.9353 0.0 0.0 0.0 356.179763673762 356.179763673762 14.78459605491924 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.3494850021680094 0.0 [VS]EAQ{I|L} 3.9353 - 1095 1 1.122 68008.9 1.0 11694 4979 16662 HBL1_DMSO_200M_050219_2,16675 HBL1_DMSO_200M_050219_2,16675,AQIDSIVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16676 88.092 89.0 497350.0 25 0 65445.0 + 29527 QLLSSLSWSL 10 71 567.3143793314061 1132.6142057296122 2 567.3137695193291 MULTI CID FTMS 0 0 0 16662 285472.90625 0.8093610030649838 -1 0.1171417236328125 14 Unmodified _QLLSSLSWSL_ REV__ENST00000534119.1_1_11:58715222-58723497:+|nuORF 14.838274106304384 0.5985701837916485 4 Q{M(Oxidation (M))|F}E[QP]{I|L} 6 -1 23.677 0.0 0.0 2.0905 0.0 0.0 372.2397683290247 0.0 372.2397683290247 0.0 6.682437647924218 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 Q{M(Oxidation (M))|F}E[QP]{I|L} 2.0905 - 119 + 1 1.122 41392.5 1.0 11695 4979 16662 HBL1_DMSO_200M_050219_2,16676 HBL1_DMSO_200M_050219_2,16676,QLLSSLSWSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16677 88.095 169.0 320320.0 25 0 28134.0 -1 0 95 1042.5041354895752 2082.9937180459506 2 1042.499438464642 MULTI CID FTMS 0 0 0 16662 299667.75 1.0 0 0.0 15 4 [KS]E{I|L}TTE{I|L}DNN{I|L}EQKSSY 18 -1 KSSY + + 76.9 33.052 7.1048 3.6918 3.6918 47.715 0.0 0.0 0.0 43.84762276664853 0.0 0.0 0.0 0 0.9876954943324544 0.0 0.9456290139465237 1.25 [KS]E{I|L}TTE{I|L}DNN{I|L}EQKSSY 3.6918 - 3140 1 1.122 43062.3 1.0 11696 4979 16662 HBL1_DMSO_200M_050219_2,16677 HBL1_DMSO_200M_050219_2,16677, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16678 88.101 318.0 179910.0 25 0 22534.0 -1 EQYHFCYDIV 10 93 687.2964858873826 1372.578418841565 2 687.2971069216728 MULTI CID FTMS 0 0 0 16662 254888.375 1.0 0 0.0 16 Carbamidomethyl (C) _EQYHFC(Carbamidomethyl (C))YDIV_ ENSG00000204179|ENST00000374339|PTPN20;ENST00000504747.1_10:48738623-48827915:-|nuORF;nc|ENSG00000204179|Q4JDL3-10|PTPN20;nc|ENSG00000204179|Q4JDL3-11|PTPN20;nc|ENSG00000204179|Q4JDL3-2|PTPN20;nc|ENSG00000204179|Q4JDL3-3|PTPN20;nc|ENSG00000204179|Q4JDL3-4|PTPN20;nc|ENSG00000204179|Q4JDL3-5|PTPN20;nc|ENSG00000204179|Q4JDL3-6|PTPN20 17.11289562659939 0.5604042439455784 4 YVQEV{I|L} 6 -1 40.138 0.0 0.0 2.9243 0.0 0.0 623.1837025373062 0.0 623.1837025373062 0.0 19.16895006820745 0.0 0.0 0 0.8182503180159344 0.0 0.3807196863200844 0.4247425010840047 YVQEV{I|L} 2.9243 - 139 1 1.122 49062.9 1.0 11697 4979 16662 HBL1_DMSO_200M_050219_2,16678 HBL1_DMSO_200M_050219_2,16678,EQYHFCYDIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16679 88.105 196.0 393290.0 25 0 30724.0 + 35596 STVEVIFHV 9 109 515.7804113468655 1029.546269760531 2 515.7827636599541 MULTI CID FTMS 0 0 0 16662 221186.625 0.7405245336602061 -1 0.1171417236328125 17 Unmodified _STVEVIFHV_ ENSG00000174373|ENST00000680220|RALGAPA1;ENSG00000188559|ENST00000202677|RALGAPA2;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1;nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2 63.562846038646086 0.0241094678104353 4 {[MG]|[TS]}VEV{I|L}{M(Oxidation (M))|F}HV 9 0 + 57.062 0.0 0.0 5.5424 5.5424 87.439 0.0 0.0 0.0 17.430380486862937 10.20181229336984 10.20181229336984 20.59121452118656 0 0.7742275032520141 0.0 0.4247425010840047 0.0 + + {[MG]|[TS]}VEV{I|L}{M(Oxidation (M))|F}HV;{[MG]|[TS]}VEV{[{M(Oxidation (M))|F}H]|[RQ]}V{I|L};{[MG]|[TS]}VEV{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}V;{[MG]|[TS]}V[RK]G{M(Oxidation (M))|F}HV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}HVWT;{[MG]|[TS]}V{[{M(Oxidation (M))|F}H]|[RQ]}{NN|[MP]|[D{I|L}]|[EV]}V{I|L};{[MG]|[TS]}VAA[KA]{M(Oxidation (M))|F}HV;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{NN|[MP]|[D{I|L}]|[EV]}VWT;[{I|L}V]E{M(Oxidation (M))|F}HVWT;{[MG]|[TS]}V{[{M(Oxidation (M))|F}H]|[RQ]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}V 5.5424;3.5424;3.002;2.9691;2.6354;1.9404;1.7824;1.5548;1.4256;1.4001 +;-;-;-;-;-;-;-;-;- + 473 + 1 1.122 65170.3 1.0 11698 4979 16662 HBL1_DMSO_200M_050219_2,16679 HBL1_DMSO_200M_050219_2,16679,STVEVIFHV True True STVEVIFHV 88.104692 515.782763659954 2189256.25 16662.0 ENSG00000188559|ENST00000202677|RALGAPA2;;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;;nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;;nc|ENSG00000174373|Q6GYQ0|RALGAPA1;;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;;ENSG00000174373|ENST00000680220|RALGAPA1;;nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2;;nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2 7.294636249542236 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16680 88.119 800.0 223580.0 25 0 21034.0 + 42920 VVQPLLVSV 9 164 477.3050022158841 952.5954514985682 2 477.3050720095634 MULTI CID FTMS 0 0 0 16662 210806.34375 0.2809594399506003 2 -0.2824554443359375 18 Unmodified _VVQPLLVSV_ ENSG00000115484|ENST00000394440|CCT4;nc|ENSG00000115484|P50991-2|CCT4 34.10243960390752 0.1078313939113124 4 [{I|L}P]{I|L}VQVSVV 9 6 + 43.483 0.0 0.0 4.5647 4.5647 66.818 0.0 0.0 0.0 12.648178230095365 4.762036441594191 4.762036441594191 0.4845500650402812 0 0.4916440611282626 1.0 0.0 0.3494850021680094 [{I|L}P]{I|L}VQVSVV;[{I|L}P]{I|L}VN{I|L}SVV;[{I|L}P]{I|L}VVQSVV;[{I|L}P]{I|L}N{I|L}VSVV;[{I|L}P]{I|L}NV{I|L}SVV;[{I|L}P]{I|L}VGG{I|L}SVV;[{I|L}P]{I|L}VV[AG]SVV;{I|L}{I|L}PVQVSVV;[{I|L}P]{I|L}V[AG]VSVV;{I|L}{I|L}PVN{I|L}SVV 4.5647;4.5138;4.329;3.9327;3.8818;3.5472;3.3623;3.2369;3.2312;3.1861 -;-;-;-;-;-;-;-;-;- 706 1 1.122 138622.6 0.8299999833106995 11699 4979 16662 HBL1_DMSO_200M_050219_2,16680 HBL1_DMSO_200M_050219_2,16680,VVQPLLVSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16681 88.132 800.0 233440.0 25 0 15271.0 + 12372 GTFDNIYLHV 10 194 589.7955465170278 1177.5765401008557 2 589.7938110232353 MULTI CID FTMS 0 0 0 16662 179112.953125 0.3292575397982065 -2 0.2556381225585937 19 Unmodified _GTFDNIYLHV_ ENSG00000121579|ENST00000240922|NAA50 43.85829265575387 0.1168243637355526 4 {[SA]|[TG]}{M(Oxidation (M))|F}DN{I|L}Y{I|L}HV 10 0 + 55.87 0.0 0.0 4.7445 4.7445 78.585 0.0 0.0 0.0 17.269987279362624 8.044801891059933 8.044801891059933 8.044801891059933 0 0.25 1.0 0.0 0.3807196863200844 + + {[SA]|[TG]}{M(Oxidation (M))|F}DN{I|L}Y{I|L}HV;{[SA]|[TG]}{M(Oxidation (M))|F}DN{I|L}Y{I|L}VH;{[SA]|[TG]}{M(Oxidation (M))|F}DGG{I|L}Y{I|L}HV;{[SA]|[TG]}{M(Oxidation (M))|F}DN{I|L}Y[HV]{I|L};{[SA]|[TG]}{M(Oxidation (M))|F}DGG{I|L}Y{I|L}VH;{[SA]|[TG]}{[CA]|SS}{[DS]|[MA]|[CV]|TT}{I|L}Y{I|L}HV;{[SA]|[TG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}KYT{I|L}CV;{[SA]|[TG]}{M(Oxidation (M))|F}[YR]{[DA]|[EG]}{I|L}HV;{[SA]|[TG]}{M(Oxidation (M))|F}DN{I|L}[NG]NKV;{[SA]|[TG]}{M(Oxidation (M))|F}[YK]{M(Oxidation (M))|F}T{I|L}CV 4.7445;4.0613;3.6429;3.1522;2.9598;2.7526;2.7309;2.4763;2.3546;2.2879 +;-;-;-;-;-;-;-;-;- + 3979 + 1 1.122 140939.8 0.8899999856948853 11700 4979 16662 HBL1_DMSO_200M_050219_2,16681 HBL1_DMSO_200M_050219_2,16681,GTFDNIYLHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16682 88.147 800.0 198040.0 25 0 35740.0 + 9226 FGLARAFGV 9 149 469.26694549768143 936.5193380621628 2 469.2671081423759 MULTI CID FTMS 0 0 0 16662 167693.234375 0.9205246124699888 -1 0.1171417236328125 20 Unmodified _FGLARAFGV_ ENSG00000123374|ENST00000266970|CDK2;ENSG00000250506|ENST00000448471|CDK3;ENST00000554619.5_1_12:56361683-56363594:+|nuORF;ENST00000556656.5_1_12:56361683-56365109:+|nuORF;ENST00000567351.5_2_17:73997368-73998786:+|nuORF;nc|ENSG00000123374|P24941-2|CDK2 61.357469665136826 0.0253304979873734 4 A{I|L}GE 4 7 40.433 0.0 0.0 4.3174 0.0 0.0 548.308397361525 0.0 548.308397361525 0.0 -12.668432240108771 -12.668432240108771 0.0 0 0.8494850021680094 0.0 0.0 0.0 A{I|L}GE 4.3174 - 393 1 1.122 125002.1 0.7300000190734863 11701 4979 16662 HBL1_DMSO_200M_050219_2,16682 HBL1_DMSO_200M_050219_2,16682,FGLARAFGV True True FGLARAFGV 88.147329 469.267108142376 1761989.25 16662.0 ENST00000556656.5_1_12:56361683-56365109:+|nuORF;;ENSG00000123374|ENST00000266970|CDK2;;ENSG00000250506|ENST00000448471|CDK3;;nc|ENSG00000123374|P24941-2|CDK2;;ENST00000554619.5_1_12:56361683-56363594:+|nuORF;;ENST00000567351.5_2_17:73997368-73998786:+|nuORF 6.940122127532959 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16684 88.152 2.0 33716000.0 25 0 5326900.0 + 45762 YYISPRLTF 9 52 580.3110719907387 1158.6075910482773 2 580.3119994997978 MULTI CID FTMS 0 0 0 16683 24149064.0 0.9889377193254028 1 -0.1946640014648437 1 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 17.11289562659939 0.3734572693229295 4 YY{I|L}S 4 5 56.186 0.0 0.0 4.8494 0.0 0.0 0.0 629.3420959225721 629.3420959225721 42.69077524932108 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YY{I|L}S 4.8494 + + 21 + 1 1.126 57479.2 1.0 11702 4980 16683 HBL1_DMSO_200M_050219_2,16684 HBL1_DMSO_200M_050219_2,16684,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16685 88.153 25.0 1650000.0 25 0 296110.0 + 13707 HQLENLSNFI 10 53 607.8120124590596 1213.609471984919 2 607.8122436404228 MULTI CID FTMS 0 0 0 16683 2071647.25 0.6081904200890849 2 -0.2457504272460937 2 Unmodified _HQLENLSNFI_ ENSG00000064666|ENST00000263097|CNN2;ENST00000443067.1_1_1:166765603-166766044:+|nuORF;nc|ENSG00000064666|Q99439-2|CNN2 67.83816525789305 0.0190062514522628 4 [HQ]{I|L}EN{I|L}SN{M(Oxidation (M))|F}{I|L} 10 0 + 87.032 0.0 0.0 7.1713 7.1713 89.017 0.0 0.0 0.0 8.819459175083608 80.04222849768787 8.819459175083608 9.164539485499247 0 0.7742275032520141 0.0 0.8807196863200843 1.5356668758921828 + + [HQ]{I|L}EN{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EGG{I|L}SN{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EN{I|L}SGG{M(Oxidation (M))|F}{I|L};[HQ]{I|L}EGG{I|L}SGG{M(Oxidation (M))|F}{I|L};[HQ]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[W{I|L}]N{M(Oxidation (M))|F}{I|L} 7.1713;6.4162;6.4162;5.664;3.2303 +;-;-;-;- + 293 1 1.126 38752.0 1.0 11703 4980 16683 HBL1_DMSO_200M_050219_2,16685 HBL1_DMSO_200M_050219_2,16685,HQLENLSNFI True True HQLENLSNFI 88.153075 607.812243640423 57961864.0 16683.0 ENSG00000064666|ENST00000263097|CNN2;;nc|ENSG00000064666|Q99439-2|CNN2;;ENST00000443067.1_1_1:166765603-166766044:+|nuORF 7.506351629892985 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16686 88.154 18.0 3359400.0 25 0 928990.0 16421 IYWGAYLL 8 52 499.7694131733822 997.5242734135644 2 499.7695800662041 MULTI CID FTMS 0 0 0 16683 3044698.0 0.698541360618228 -1 0.0877914428710937 3 Unmodified _IYWGAYLL_ ENST00000298229.6_1_11:71949456-71949768:+|nuORF 24.20995872069341 0.5349487244130675 4 Y{I|L}{I|L} 3 5 32.435 0.0 0.0 3.2516 0.0 0.0 590.2824877304404 0.0 590.2824877304404 0.0 21.46591250700361 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + Y{I|L}{I|L} 3.2516 + + 49 1 1.126 50060.1 1.0 11704 4980 16683 HBL1_DMSO_200M_050219_2,16686 HBL1_DMSO_200M_050219_2,16686,IYWGAYLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16687 88.157 148.0 325420.0 25 0 53504.0 + 30755 RHLVVWKKMV 10 62 432.5975912181858 1294.7709442547575 3 432.5975524783134 MULTI CID FTMS 0 0 0 16683 335525.0625 0.5167547224224668 2 -0.2457504272460937 4 Unmodified _RHLVVWKKMV_ REV__ENST00000361763.8_1_11:118175656-118183365:+|nuORF 1.844237919475145 0.7181058121064529 4 V 1 -1 12.218 0.0 0.0 0.94368 0.0 0.0 1177.6914516173536 0.0 1177.6914516173536 0.0 2.7545373444029053 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.94368 + + 13 + 1 1.126 51886.5 1.0 11705 4980 16683 HBL1_DMSO_200M_050219_2,16687 HBL1_DMSO_200M_050219_2,16687,RHLVVWKKMV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16688 88.171 798.0 255180.0 25 0 22943.0 + 40315 VGYDKDFLTI 10 192 585.8049185980118 1169.5952842628235 2 585.8047363162041 MULTI CID FTMS 0 0 0 16683 233436.375 0.2716853805574021 -1 0.0877914428710937 5 Unmodified _VGYDKDFLTI_ ENSG00000123066|ENST00000281928|MED13L 107.5634045930896 0.0042230779264997 4 [VG]YDSGV{M(Oxidation (M))|F}{I|L}T{I|L} 11 3 + 79.43 0.0 0.0 6.7913 6.7913 76.911 0.0 0.0 0.0 2.2221975863664483 2.2221975863664483 2.2221975863664483 1.012047691599733 0 1.9802046884880933 1.3979400086720375 1.3243923658886183 0.0 [VG]YDSGV{M(Oxidation (M))|F}{I|L}T{I|L};[VG]YDKD{M(Oxidation (M))|F}{I|L}T{I|L};VGYV{M(Oxidation (M))|F}TDRT{I|L};[VG]SYGDV{M(Oxidation (M))|F}{I|L}T{I|L};[VG]A{I|L}YDYGVT{I|L};[VG]SDYGV{M(Oxidation (M))|F}{I|L}T{I|L};[VG]YDSR{M(Oxidation (M))|F}{I|L}T{I|L};[VG]YSGDV{M(Oxidation (M))|F}{I|L}T{I|L};[VG]SYDGV{M(Oxidation (M))|F}{I|L}T{I|L};[VG]YDSG{M(Oxidation (M))|F}V{I|L}T{I|L} 6.7913;6.7047;6.6013;6.4412;6.4285;6.4171;6.3901;6.366;6.2275;6.2084 -;+;-;-;-;-;-;-;-;- + 53972 1 1.126 156638.7 1.0 11706 4980 16683 HBL1_DMSO_200M_050219_2,16688 HBL1_DMSO_200M_050219_2,16688,VGYDKDFLTI True True VGYDKDFLTI 88.170991 585.804736316204 14581077.0 16683.0 ENSG00000123066|ENST00000281928|MED13L 4.70259968439738 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16689 88.178 408.0 300500.0 25 0 9820.0 -1 0 141 927.4475612176002 1852.8805695020003 2 927.4486572146416 MULTI CID FTMS 0 0 0 16683 211635.234375 1.0 0 0.0 6 4 {[DA]|[EG]}{I|L}T{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}EQ{I|L}D{I|L} 12 -1 53.668 0.0 0.0 2.8965 0.0 0.0 0.0 454.1816918987378 454.1816918987378 24.01486657462592 0.0 0.0 0.0 0 0.0 1.154901959985743 1.1307196863200843 0.0 {[DA]|[EG]}{I|L}T{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}EQ{I|L}D{I|L} 2.8965 - 4087 1 1.126 80078.2 1.0 11707 4980 16683 HBL1_DMSO_200M_050219_2,16689 HBL1_DMSO_200M_050219_2,16689, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16690 88.184 305.0 354380.0 25 0 36241.0 + + 23535 LTIGTIDEI 9 102 974.5391257269796 973.5318492603795 1 974.5417968630792 MULTI CID FTMS 0 0 0 16683 196717.65625 0.6631534613063342 1 -0.1946640014648437 7 Unmodified _LTLGTLDEL_ ENSG00000167986|ENST00000301764|DDB1 141.82661023413823 0.0271086044223435 4 [{I|L}T]G{I|L}T{I|L}DE{I|L} 9 -1 + 69.681 0.0 0.0 7.1575 7.1575 90.858 0.0 0.0 0.0 15.999934467764874 14.09256854528806 14.09256854528806 9.503187623076954 0 1.0114393726401687 1.3010299956639813 2.829689690656103 0.0 [{I|L}T]G{I|L}T{I|L}DE{I|L};[{I|L}T]G{I|L}DE{I|L}T{I|L};[{I|L}T]G{I|L}DET{I|L}{I|L};[{I|L}T]G{I|L}TD{I|L}E{I|L};[{I|L}T]G[VP]{I|L}D{M(Oxidation (M))|F}{I|L};[{I|L}T]GDE{I|L}{I|L}T{I|L};[{I|L}T]G{I|L}TEVE{I|L};[{I|L}T]GDE{I|L}T{I|L}{I|L};[{I|L}T]GD{I|L}E{I|L}T{I|L};[{I|L}T]GD{I|L}ET{I|L}{I|L} 7.1575;6.1814;6.1081;6.0883;5.9353;5.9247;5.8586;5.8514;5.812;5.7388 -;-;-;-;-;-;-;-;-;- 3776 1 1.126 75167.8 1.0 11708 4980 16683 HBL1_DMSO_200M_050219_2,16690 HBL1_DMSO_200M_050219_2,16690,LTLGTLDEL False False LTIGTIDEI 88.183912 974.541796863079 4427351.0 16683.0 ENSG00000167986|ENST00000301764|DDB1 4.273166497548421 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16691 88.198 800.0 136070.0 25 0 28073.0 + 39649 VEAIKAPLIRW 11 116 648.3935511402304 1294.7725493472608 2 648.3937866091728 MULTI CID FTMS 0 0 0 16683 189748.546875 0.5457169028746792 2 -0.2457504272460937 8 Unmodified _VEAIKAPLIRW_ REV__ENSG00000171798|ENST00000304613|KNDC1 5.296884461304476 0.8501568894076437 4 {I|L} 1 -1 10.713 0.0 0.0 0.82743 0.0 0.0 1163.6775308919855 0.0 1163.6775308919855 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.82743 + + 57 + 1 1.126 100703.8 0.9100000262260436 11709 4980 16683 HBL1_DMSO_200M_050219_2,16691 HBL1_DMSO_200M_050219_2,16691,VEAIKAPLIRW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16692 88.203 264.0 594720.0 25 0 45606.0 + + 11868 AQVEPLLRL 9 163 520.2325369466132 1038.4505209600263 2 520.2327758669853 MULTI CID FTMS 0 0 0 16683 174970.75 0.7073203407605331 -1 0.0877914428710937 9 Unmodified _GLSTMESDSL_ ENSG00000147813|ENST00000449291|NAPRT;ENST00000464332.5_1_8:144657010-144658430:-|nuORF;nc|ENSG00000147813|Q6XQN6-2|NAPRT 15.847184025352805 0.5816416552707754 4 AAVKK{I|L}EV 8 -1 30.979 0.0 0.0 2.9832 0.0 0.0 0.0 196.8987845858865 196.8987845858865 8.52317547949026 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.3807196863200844 0.0 AAVKK{I|L}EV 2.9832 - 470 1 1.126 122087.0 1.0 11710 4980 16683 HBL1_DMSO_200M_050219_2,16692 HBL1_DMSO_200M_050219_2,16692,GLSTMESDSL False False AQVEPLLRL 88.202641 520.232775866985 1162750.75 16683.0 ENSG00000147813|ENST00000449291|NAPRT;;ENST00000464332.5_1_8:144657010-144658430:-|nuORF;;nc|ENSG00000147813|Q6XQN6-2|NAPRT 0.9748062398284674 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16693 88.217 800.0 90470.0 25 0 15400.0 -1 0 50 1173.1679619706183 3516.482056512056 3 1173.501269519329 MULTI CID FTMS 0 0 0 16683 181098.4375 0.011881028968967 6 -0.7098846435546875 10 4 E 1 -1 6.9897 0.0 0.0 0.19877 0.0 0.0 2860.254774873187 524.1613253229124 3384.4161001961 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19877 - 13 + 1 1.126 61228.2 0.7900000214576721 11711 4980 16683 HBL1_DMSO_200M_050219_2,16693 HBL1_DMSO_200M_050219_2,16693, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16694 88.23 800.0 160740.0 25 0 7609.6 -1 0 112 880.8986709399346 1759.7827889466691 2 881.4000121951103 MULTI CID FTMS 0 0 0 16683 181257.453125 0.6725885069786885 2 -0.2457504272460937 11 4 [KT]EY{M(Oxidation (M))|F}ANQQAED 12 -1 65.035 0.0 0.0 3.6956 0.0 0.0 0.0 332.1005953424438 332.1005953424438 41.84746300564576 0.0 0.0 0.0 0 0.0 0.0 0.0 1.274227503252014 [KT]EY{M(Oxidation (M))|F}ANQQAED 3.6956 - 1241 + 1 1.126 90863.8 0.8399999737739563 11712 4980 16683 HBL1_DMSO_200M_050219_2,16694 HBL1_DMSO_200M_050219_2,16694, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16695 88.238 341.0 290710.0 25 0 23376.0 + 23604 LTPLPPRQFA 10 112 570.3310999382613 1138.6476469433226 2 570.3323242068291 MULTI CID FTMS 0 0 0 16683 160244.6875 0.1786946909747825 -4 0.4644546508789062 12 Unmodified _LTPLPPRQFA_ REV__ENST00000280562.9_1_12:123476423-123479403:-|nuORF 14.838274106304384 0.5985701837916485 4 [{I|L}P]T{I|L}P{I|L} 6 -1 35.481 0.0 0.0 3.116 0.0 0.0 0.0 501.2175614034263 501.2175614034263 10.786303951609622 0.0 0.0 0.0 0 0.0 0.9208187539523752 1.4802046884880935 0.0 [{I|L}P]T{I|L}P{I|L} 3.116 - 374 1 1.126 79836.9 1.0 11713 4980 16683 HBL1_DMSO_200M_050219_2,16695 HBL1_DMSO_200M_050219_2,16695,LTPLPPRQFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16696 88.252 800.0 108410.0 25 0 31135.0 + -1 RKKRERRRIC 10 104 729.4372926260872 1456.8600323189744 2 729.4378539919853 MULTI CID FTMS 0 0 0 16683 156565.78125 1.0 0 0.0 13 Carbamidomethyl (C) _RKKRERRRIC(Carbamidomethyl (C))_ REV__ENST00000397276.6_1_14:23794476-23794560:+|nuORF 0.4583401331227399 0.7245164002484112 4 {I|L} 1 -1 10.596 0.0 0.0 0.72731 0.0 0.0 1325.7649833461212 0.0 1325.7649833461212 0.0 5.111381973555762 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.72731 + + 88 + 1 1.126 74067.6 0.699999988079071 11714 4980 16683 HBL1_DMSO_200M_050219_2,16696 HBL1_DMSO_200M_050219_2,16696,RKKRERRRIC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16697 88.266 800.0 155950.0 25 0 15597.0 + 43901 YFVPMFLLATL 11 157 657.8599029863648 1313.7052530395297 2 657.8593017458916 MULTI CID FTMS 0 0 0 16683 138396.40625 1.0 0 0.0 14 Unmodified _YFVPMFLLATL_ REV__ENSG00000105641|ENST00000222248|SLC5A5 20.453626601364224 0.6096880269572111 4 [{I|L}T]VVNNC(Carbamidomethyl (C))P{I|L}A[{I|L}T] 12 -1 + 76.328 0.0 0.0 5.8101 5.8101 83.835 0.0 0.0 0.0 10.0 4.436974992327123 4.436974992327123 9.098233696509126 0 0.805462187404089 2.0 1.4846368802282015 0.2614393726401688 [{I|L}T]VVNNC(Carbamidomethyl (C))P{I|L}A[{I|L}T];[{I|L}T]VVNN[CG]P{I|L}A[{I|L}T];[{I|L}T]VVNGGC(Carbamidomethyl (C))P{I|L}A[{I|L}T];[{I|L}V]VTNNC(Carbamidomethyl (C))P{I|L}A[{I|L}T];[{I|L}T]VV{I|L}[C(Carbamidomethyl (C))D]P{I|L}A[{I|L}T];[{I|L}T]VVGGNC(Carbamidomethyl (C))P{I|L}A[{I|L}T];[{I|L}V]S{I|L}NNC(Carbamidomethyl (C))P{I|L}A[{I|L}T];[{I|L}T]VVNN{[QV]|[N{I|L}]|[RA]|[KV]}TM[VP];[{I|L}T]MT{[QV]|[N{I|L}]|[RA]|[KV]}NN{I|L}PA{I|L};[{I|L}V]VTNN{[QV]|[N{I|L}]|[RA]|[KV]}TM[VP] 5.8101;5.1175;5.1175;5.0489;4.9416;4.9185;4.8197;4.7755;4.7261;4.7182 -;-;-;-;-;-;-;-;-;- 12206 1 1.126 98079.5 0.6700000166893005 11715 4980 16683 HBL1_DMSO_200M_050219_2,16697 HBL1_DMSO_200M_050219_2,16697,YFVPMFLLATL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16698 88.281 800.0 332350.0 25 0 28975.0 + 21079 LPAGILPMV 9 156 463.7723263658629 925.5300997985258 2 463.7720214724541 MULTI CID FTMS 0 0 0 16683 103284.53125 0.4739079314325043 -1 0.0877914428710937 15 Oxidation (M) _LPAGILPM(Oxidation (M))V_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 56.04830969593885 0.0282699710924866 4 [{I|L}P]Q{I|L}{I|L}P{M(Oxidation (M))|F}V 8 2 + 49.914 0.0 0.0 5.3931 5.3931 79.206 0.0 0.0 0.0 5.976951859255131 2.659167939666318 2.659167939666318 5.976951859255131 0 1.3539171939081172 1.6989700043360187 0.0 0.0 [{I|L}P]Q{I|L}{I|L}P{M(Oxidation (M))|F}V;[{I|L}A]GP{I|L}{I|L}P{M(Oxidation (M))|F}V;[{I|L}P]Q{I|L}{I|L}SQQ;[{I|L}P][AG]{I|L}{I|L}P{M(Oxidation (M))|F}V;[{I|L}A]GP{I|L}{I|L}SQQ;[{I|L}P][AG]{I|L}{I|L}SQQ;[PA]G{I|L}{I|L}{I|L}P{M(Oxidation (M))|F}V;[QP]{I|L}{I|L}{I|L}P{M(Oxidation (M))|F}V;[Q{I|L}]P{I|L}{I|L}P{M(Oxidation (M))|F}V;{[VA]|[{I|L}G]}AP{I|L}{I|L}P{M(Oxidation (M))|F}V 5.3931;4.7473;4.4752;4.3923;3.8294;3.4745;3.4284;3.2816;3.1874;2.9539 -;-;-;+;-;-;-;-;-;- + 646 1 1.126 205872.9 0.5299999713897705 11716 4980 16683 HBL1_DMSO_200M_050219_2,16698 HBL1_DMSO_200M_050219_2,16698,LPAGILPMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16699 88.295 800.0 227060.0 25 0 7562.4 -1 0 120 1066.5047927952744 2130.995032657349 2 1066.995532214642 MULTI CID FTMS 0 0 0 16683 91389.0390625 0.2677101164964289 13 -1.3388442993164062 16 4 {[QN]|[E{I|L}]|[KN]}YG{I|L}MQT{I|L} 9 -1 56.383 0.0 0.0 2.6459 0.0 0.0 0.0 1079.442273218149 1079.442273218149 5.104324861459752 0.0 0.0 0.0 0 0.0 1.154901959985743 0.9247425010840048 0.8129529932484498 {[QN]|[E{I|L}]|[KN]}YG{I|L}MQT{I|L} 2.6459 - 50874 1 1.126 115487.5 0.4300000071525574 11717 4980 16683 HBL1_DMSO_200M_050219_2,16699 HBL1_DMSO_200M_050219_2,16699, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16700 88.308 800.0 67416.0 25 0 7865.7 + 37795 LPAPLPGL 8 79 776.4537739483629 775.4464974817629 1 777.0298339724541 MULTI CID FTMS 0 0 0 -1 0 17 Unmodified _TLSGKGTL_ nc|ENSG00000102900|Q8N1F7-2|NUP93;ENSG00000102900|ENST00000308159|NUP93 7.289230182591677 0.7800870086367542 4 [{I|L}P]T{I|L}A[YV] 7 7 + 34.269 0.0 0.0 4.4193 4.4193 72.496 0.0 0.0 0.0 20.290003832308443 3.65301426102544 3.65301426102544 3.679767852945943 0 0.0 2.0 0.3054621874040891 0.0 [{I|L}P]T{I|L}A[YV];[{I|L}P]T{I|L}[YG]{I|L};[{I|L}P][YG]{I|L}T{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}VVK{M(Oxidation (M))|F};[VP]P[H{I|L}]T{I|L} 4.4193;3.9448;3.3812;0.36796;0.025639 -;-;-;-;- 124 1 1.126 47817.4 0.4900000095367431 11718 4980 16683 HBL1_DMSO_200M_050219_2,16700 HBL1_DMSO_200M_050219_2,16700,TLSGKGTL False False LPAPLPGL 88.308374 777.029833972454 0.0 16683.0 nc|ENSG00000102900|Q8N1F7-2|NUP93;;ENSG00000102900|ENST00000308159|NUP93 0.1775048573811849 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16701 88.314 241.0 337580.0 25 0 23489.0 + 21785 KVFEHFLENL 10 110 638.3405875582986 1274.666622183397 2 638.3412353396416 MULTI CID FTMS 0 0 0 16683 86551.578125 0.2395868016169046 -1 0.0877914428710937 18 Unmodified _LPNFGKMLENI_ ENSG00000198056|ENST00000338193|PRIM1 49.55428908609986 0.1200983873401432 4 {NN|[MP]|[D{I|L}]|[EV]}Q{[CT]|[{M(Oxidation (M))|F}G]}VK{I|L}EN{I|L} 11 4 + 62.341 0.0 0.0 4.8908 4.8908 75.588 0.0 0.0 0.0 4.704778348933779 11.550023300178417 4.704778348933779 4.704778348933779 0 0.5 0.744727494896694 0.4896518287104437 1.3807196863200843 {NN|[MP]|[D{I|L}]|[EV]}Q{[CT]|[{M(Oxidation (M))|F}G]}VK{I|L}EN{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}E{M(Oxidation (M))|F}VK{I|L}EN{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q[R{M(Oxidation (M))|F}]K{I|L}EN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}E{[CT]|[{M(Oxidation (M))|F}G]}VK{I|L}EN{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{[CT]|[{M(Oxidation (M))|F}G]}VK{I|L}EGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]{[CT]|[{M(Oxidation (M))|F}G]}VK{I|L}EN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}E[R{M(Oxidation (M))|F}]K{I|L}EN{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}E{M(Oxidation (M))|F}VK{I|L}EGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q[R{M(Oxidation (M))|F}]K{I|L}EGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG][R{M(Oxidation (M))|F}]K{I|L}EN{I|L} 4.8908;4.5217;4.3749;4.3624;4.1746;4.1746;3.8466;3.8027;3.6559;3.6559 -;-;-;-;-;-;-;-;-;- 2076 1 1.126 70674.2 1.0 11719 4980 16683 HBL1_DMSO_200M_050219_2,16701 HBL1_DMSO_200M_050219_2,16701,LPNFGKMLENI True False KVFEHFLENL 88.314057 638.341235339642 3226434.0 16683.0 ENSG00000198056|ENST00000338193|PRIM1 5.728242715199788 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16702 88.328 800.0 36040.0 25 0 3163.8 -1 0 65 778.692635913709 2333.0560783413266 3 778.6935912966728 MULTI CID FTMS 0 0 0 16683 85341.0234375 1.0 0 0.0 19 4 {[QN]|[E{I|L}]|[KN]}V 3 -1 19.666 0.0 0.0 0.84292 0.0 0.0 0.0 1988.837883111111 1988.837883111111 10.713337517843655 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}V 0.84292 - 57 1 1.126 32476.1 0.4900000095367431 11720 4980 16683 HBL1_DMSO_200M_050219_2,16702 HBL1_DMSO_200M_050219_2,16702, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16703 88.342 800.0 118350.0 25 0 5942.4 -1 0 106 1076.527134813728 3226.559575041384 3 1076.865893542767 MULTI CID FTMS 0 0 0 16683 66449.421875 0.537002656120473 -2 0.2049331665039062 20 4 NVMN{I|L} 5 -1 46.013 0.0 0.0 1.4261 0.0 0.0 2637.2652716109174 0.0 2637.2652716109174 0.0 34.72689062979555 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 NVMN{I|L} 1.4261 - 490 1 1.126 69223.2 0.4799999892711639 11721 4980 16683 HBL1_DMSO_200M_050219_2,16703 HBL1_DMSO_200M_050219_2,16703, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16705 88.347 17.0 2139400.0 25 0 303960.0 + 3003 AVIPRLVQL 9 60 504.8321147498242 1007.6496765664484 2 504.8323242068291 MULTI CID FTMS 0 0 0 16704 1590140.125 0.056466540308763 3 -0.2829132080078125 1 Unmodified _AVIPRLVQL_ ENSG00000173801|ENST00000393931|JUP;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 36.04419817259434 0.0971720506436186 4 {[VA]|[{I|L}G]}{I|L} 3 6 36.254 0.0 0.0 3.5979 0.0 0.0 0.0 721.4368718720006 721.4368718720006 23.49026196887888 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + {[VA]|[{I|L}G]}{I|L} 3.5979 + + 18 + 1 1.135 33671.8 1.0 11722 4981 16704 HBL1_DMSO_200M_050219_2,16705 HBL1_DMSO_200M_050219_2,16705,AVIPRLVQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16706 88.348 37.0 881580.0 25 0 102740.0 + 25594 NFIEKVEAL 9 70 531.7954326692338 1061.5763124052676 2 531.7955810427666 MULTI CID FTMS 0 0 0 16704 626187.1875 0.0510179426410367 3 -0.2829132080078125 2 Unmodified _NFIEKVEAL_ ENSG00000092201|ENST00000216297|SUPT16H 29.081581746732265 0.1611639662936252 4 E{I|L}SR 4 8 29.623 0.0 0.0 2.7904 0.0 0.0 558.3383656232437 0.0 558.3383656232437 0.0 6.64697116001868 0.0 0.0 0 1.0682503180159344 0.0 0.4247425010840047 0.0 E{I|L}SR 2.7904 - 106 1 1.135 31132.2 1.0 11723 4981 16704 HBL1_DMSO_200M_050219_2,16706 HBL1_DMSO_200M_050219_2,16706,NFIEKVEAL False True NFIEKVEAL 88.347736 531.795581042767 268953600.0 16704.0 ENSG00000092201|ENST00000216297|SUPT16H 6.908599058787028 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16707 88.349 37.0 1724400.0 25 0 231000.0 + 21493 LPHVPLGVI 9 75 472.7997630750537 943.5849732169072 2 472.8002807497978 MULTI CID FTMS 0 0 0 16704 1572195.5 0.4130581338557045 -3 0.39959716796875 3 Unmodified _LPHVPLGVI_ ENSG00000115307|ENST00000377526|AUP1;ENST00000462297.1_1_2:74754523-74754670:-|nuORF;ENST00000463900.5_1_2:74753929-74756164:-|nuORF;ENST00000466894.5_1_2:74754206-74756164:-|nuORF;ENST00000486234.1_1_2:74754275-74754965:-|nuORF;nc|ENSG00000115307|Q9Y679-3|AUP1 36.46614268402704 0.0948557732959553 4 [HV]P{I|L}GP{I|L}V{I|L} 9 4 + 80.596 0.0 0.0 8.5414 8.5414 91.003 0.0 0.0 0.0 13.802112417116064 16.478174818886373 13.802112417116064 8.26606256887672 0 0.7742275032520141 1.5228787452803376 0.0 0.0 [HV]P{I|L}GP{I|L}V{I|L};[HV]P{I|L}GPV{I|L}{I|L};[HV]P{I|L}GVP{I|L}{I|L};[{I|L}P]HVGP{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}GP{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VGP{I|L}V{I|L};[HV]P{I|L}[PA]VV{I|L};[{I|L}P]HVGPV{I|L}{I|L};[{I|L}P]GVHP{I|L}V{I|L};[{I|L}P]HVGVP{I|L}{I|L} 8.5414;7.6654;7.3464;7.0787;6.6085;6.5544;6.3676;6.2027;5.9965;5.8836 -;-;-;-;-;-;-;-;-;- 573 1 1.135 56484.4 1.0 11724 4981 16704 HBL1_DMSO_200M_050219_2,16707 HBL1_DMSO_200M_050219_2,16707,LPHVPLGVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16708 88.35 25.0 2980700.0 25 0 301140.0 + 15084 IMLEALERV 9 84 537.3041185625092 1072.5936841918185 2 537.3043090701103 MULTI CID FTMS 0 0 0 16704 1644190.125 0.4570566536688836 -2 0.2824554443359375 4 Unmodified _IMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 34.93206674587334 0.1032771302489716 4 {I|L}M{I|L}EA{I|L}E[RV] 9 0 + 83.153 0.0 0.0 7.7526 7.7526 83.365 0.0 0.0 0.0 56.95554701812867 4.137342758552691 4.137342758552691 3.0102999566398125 0 0.8494850021680094 2.0 0.3054621874040891 0.0 + + {I|L}M{I|L}EA{I|L}E[RV];M{I|L}{I|L}EA{I|L}E[RV];{I|L}M{I|L}EA{I|L}[RD]{I|L};M{I|L}{I|L}EA{I|L}[RD]{I|L};{I|L}M{I|L}EV[DV][RV];M{I|L}{I|L}EV[DV][RV];{I|L}MV[DV]{I|L}E[RV];M{I|L}V[DV]{I|L}E[RV];{I|L}MQ[KG]{I|L}E[RV];{I|L}MV[DV]{I|L}[RD]{I|L} 7.7526;7.4719;7.2753;6.9947;5.7237;5.4431;5.4286;5.148;5.043;4.9514 +;-;-;-;-;-;-;-;-;- + 430 + 1 1.135 60005.7 1.0 11725 4981 16704 HBL1_DMSO_200M_050219_2,16708 HBL1_DMSO_200M_050219_2,16708,IMLEALERV True True IMLEALERV 88.350092 537.30430907011 86654934.0 16704.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 4.642966270446777 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16709 88.351 22.0 2187000.0 25 0 133710.0 + 29608 QLVRDLLEV 9 94 542.8205584574885 1083.6265639817768 2 543.3232299685478 MULTI CID FTMS 0 0 0 16704 1529356.625 0.6445236378394233 5 -0.5152206420898438 5 Unmodified _QLVRDLLEV_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 92.4914307365334 0.0139747738690111 4 {[QN]|[E{I|L}]|[KN]}[Q{I|L}]Q{I|L}{I|L}EV 9 4 + 52.581 0.0 0.0 4.8523 4.8523 68.96 0.0 0.0 0.0 0.9691001300805624 16.92246624399813 0.9691001300805624 0.9691001300805624 0 0.3494850021680094 1.0 1.3556270500406935 2.0 {[QN]|[E{I|L}]|[KN]}[Q{I|L}]Q{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[RV]Q{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[Q{I|L}][AG]{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[RV][AG]{I|L}{I|L}EV;[{I|L}T][VP][NS]{I|L}{I|L}EV;[VP][{I|L}T][NS]{I|L}{I|L}EV;[{I|L}T][VP][WK]{I|L}EV;[VP][{I|L}T][WK]{I|L}EV;[SG][KS]{I|L}Q[HT]KV;[SG][KS]{I|L}QS[HK]{I|L} 4.8523;4.7628;4.0025;3.9131;3.697;3.5735;2.6811;2.5576;1.8787;1.1777 -;-;-;-;-;-;-;-;-;- 229 1 1.135 44369.3 1.0 11726 4981 16704 HBL1_DMSO_200M_050219_2,16709 HBL1_DMSO_200M_050219_2,16709,QLVRDLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16710 88.353 47.0 1865200.0 25 0 221480.0 2343 AQLELISRL 9 98 521.8159418470095 1041.617330760819 2 521.8166381716728 MULTI CID FTMS 0 0 0 16704 1293387.0 0.6617262664582656 -2 0.2824554443359375 6 Unmodified _AQLELISRL_ ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12 61.60191391372663 0.0251951588191061 4 [QA]{I|L}E{I|L}{I|L}SR{I|L} 9 0 [QA] + + 59.799 17.435 8.7572 5.741 5.741 55.654 0.0 0.0 0.0 0.0 40.630098805233175 0.0 0.0 0 1.424742501084005 0.0 0.805462187404089 0.3252574989159953 + + [QA]{I|L}E{I|L}{I|L}SR{I|L} 5.741 + + 238 + 1 1.135 71898.3 1.0 11727 4981 16704 HBL1_DMSO_200M_050219_2,16710 HBL1_DMSO_200M_050219_2,16710,AQLELISRL True True AQLELISRI 88.352555 521.816638171673 36193396.0 16704.0 nc|ENSG00000065883|Q14004-2|CDK13;;ENSG00000065883|ENST00000181839|CDK13 4.134066899617513 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16711 88.354 34.0 1637400.0 25 0 480190.0 + -1 VAAYSFCSL 9 71 509.2402601531311 1016.4659673730622 2 509.2411376833916 MULTI CID FTMS 0 0 0 16704 1252916.875 0.7903334326046628 1 -0.05108642578125 7 Carbamidomethyl (C) _VAAYSFC(Carbamidomethyl (C))SL_ REV__ENSG00000189181|ENST00000342623|OR14I1 11.640296217721598 0.521594087909532 4 S{I|L} 2 -1 15.573 0.0 0.0 1.5321 0.0 0.0 798.3395158123185 0.0 798.3395158123185 0.0 1.0353127608303918 0.0 0.0 0 0.0 0.0 0.0 0.0 S{I|L} 1.5321 + + 47 + 1 1.135 48394.4 1.0 11728 4981 16704 HBL1_DMSO_200M_050219_2,16711 HBL1_DMSO_200M_050219_2,16711,VAAYSFCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16712 88.355 55.0 998750.0 25 0 122450.0 + 133 AALEEADKMFL 11 71 619.3100332987357 1236.6055136642713 2 619.3106567263603 MULTI CID FTMS 0 0 0 16704 908784.8125 0.2409317843857794 -3 0.39959716796875 8 Unmodified _AALEEADKMFL_ ENSG00000255302|ENST00000530028|EID1;nc|ENSG00000255302|Q9Y6B2-2|EID1 85.76441949171179 0.0033696626484081 4 AA{I|L}EEADKM{M(Oxidation (M))|F}{I|L} 11 0 + 88.224 0.0 0.0 7.1343 7.1343 80.871 0.0 0.0 0.0 2.552725051033065 16.57577319177794 2.552725051033065 2.552725051033065 0 2.9916440611282624 1.154901959985743 0.3807196863200844 0.0 + + AA{I|L}EEADKM{M(Oxidation (M))|F}{I|L};[{I|L}A]AEEADKM{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}AAEADKM{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}AAEWKM{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}EAAADKM{M(Oxidation (M))|F}{I|L};AATAEM[RP]M{M(Oxidation (M))|F}{I|L};AATAME[RP]M{M(Oxidation (M))|F}{I|L};AA{I|L}E[CS][RP]M{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}P{[CA]|SS}ADKM{M(Oxidation (M))|F}{I|L};[{I|L}A]AE[CS][RP]M{M(Oxidation (M))|F}{I|L} 7.1343;6.9279;6.1374;5.6881;5.4896;5.3926;5.3534;5.2787;5.1038;5.0723 +;-;-;-;-;-;-;-;-;- + 2263 1 1.135 46159.9 1.0 11729 4981 16704 HBL1_DMSO_200M_050219_2,16712 HBL1_DMSO_200M_050219_2,16712,AALEEADKMFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16713 88.357 70.0 683310.0 25 0 61783.0 + -1 LELNGLKMTA 10 88 553.2979811445773 1104.5814093559543 2 553.2988159060478 MULTI CID FTMS 0 0 0 16704 721623.1875 1.0 0 0.0 9 Oxidation (M) _LELNGLKM(Oxidation (M))TA_ REV__ENST00000579434.5_1_18:51796255-51800364:+|nuORF 22.736283301280096 0.4578556481593033 4 {[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}E]Q{I|L}{I|L}T{I|L} 9 -1 {[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}E]Q{I|L}{I|L} + + 16.013 13.891 1.5922 1.4497 1.4497 44.308 0.0 0.0 0.0 0.0 3.1159716262189683 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}E]Q{I|L}{I|L}T{I|L} 1.4497 - 150 + 1 1.135 45608.8 1.0 11730 4981 16704 HBL1_DMSO_200M_050219_2,16713 HBL1_DMSO_200M_050219_2,16713,LELNGLKMTA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16714 88.36 149.0 771250.0 25 0 64918.0 -1 0 94 958.9593834262616 1915.904213919323 2 959.4626342654228 MULTI CID FTMS 0 0 0 16704 662298.8125 1.0 0 0.0 10 4 {[QV]|[N{I|L}]|[RA]|[KV]}Y{[ES]|[DT]|[{I|L}C]}EAQQNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 104.03 0.0 0.0 5.4299 5.4299 54.348 0.0 0.0 0.0 1.365006360318688 5.343633475068614 1.365006360318688 0.0 0 1.4489700043360187 1.0969100130080565 0.0 2.6791746928241125 {[QV]|[N{I|L}]|[RA]|[KV]}Y{[ES]|[DT]|[{I|L}C]}EAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{[ES]|[DT]|[{I|L}C]}EAQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]V{[ES]|[DT]|[{I|L}C]}EAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V{[ES]|[DT]|[{I|L}C]}EAQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]{M(Oxidation (M))|F}[PA]EAQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]{M(Oxidation (M))|F}[PA]EAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YQNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RD]{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RD]{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L} 5.4299;5.4299;5.3587;5.3587;5.1889;5.1889;5.0291;5.0291;5.0075;5.0075 -;-;-;-;-;-;-;-;-;- 6645 1 1.135 80362.9 1.0 11731 4981 16704 HBL1_DMSO_200M_050219_2,16714 HBL1_DMSO_200M_050219_2,16714, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16715 88.362 103.0 542490.0 25 0 51489.0 + 4887 DGHFVPNITF 10 78 573.7824168708918 1145.5502808085837 2 573.7831909060478 MULTI CID FTMS 0 0 0 16704 501191.21875 0.5401120655182933 -2 0.2824554443359375 11 Unmodified _DGHFVPNITF_ ENSG00000197713|ENST00000359429|RPE;ENSG00000235376|ENST00000441178|RPEL1;nc|ENSG00000197713|Q96AT9-4|RPE 26.268140514670165 0.3785003716575977 4 V[CS]T{M(Oxidation (M))|F} 5 7 31.198 0.0 0.0 2.7234 0.0 0.0 590.3059778384073 0.0 590.3059778384073 0.0 17.730012720637376 0.0 0.0 0 0.5 0.0 0.6989700043360187 0.0 V[CS]T{M(Oxidation (M))|F} 2.7234 - 157 + 1 1.135 51412.0 1.0 11732 4981 16704 HBL1_DMSO_200M_050219_2,16715 HBL1_DMSO_200M_050219_2,16715,DGHFVPNITF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16716 88.365 120.0 596800.0 25 0 151760.0 + 33433 SIAGIFKEV 9 75 482.2792376477939 962.5439223623878 2 482.2795287966728 MULTI CID FTMS 0 0 0 16704 463580.3125 0.883703194839 -1 0.1946640014648437 12 Unmodified _SIAGIFKEV_ ENSG00000080189|ENST00000372230|SLC35C2;ENST00000480329.5_1_20:44979343-44983832:-|nuORF;ENST00000493599.1_1_20:44979343-44980935:-|nuORF;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2 38.17557092003332 0.0854718145212029 4 {[TV]|[{I|L}S]}AG{I|L}{M(Oxidation (M))|F}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 2 + 46.946 0.0 0.0 4.8773 4.8773 73.817 0.0 0.0 0.0 8.172874778693355 3.4678748622465605 3.4678748622465605 3.4678748622465605 0 1.079689690656103 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}AG{I|L}{M(Oxidation (M))|F}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}AG{I|L}{M(Oxidation (M))|F}V{[SA]|[TG]}V;{[TV]|[{I|L}S]}AG{I|L}{M(Oxidation (M))|F}V[SG]{I|L};{[TV]|[{I|L}S]}AG{I|L}{M(Oxidation (M))|F}VV{[SA]|[TG]};{[TV]|[{I|L}S]}Q{I|L}{M(Oxidation (M))|F}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}Q{I|L}{M(Oxidation (M))|F}V{[SA]|[TG]}V;{[TV]|[{I|L}S]}Q{I|L}{M(Oxidation (M))|F}VV{[SA]|[TG]};{[TV]|[{I|L}S]}Q{I|L}{M(Oxidation (M))|F}V[SG]{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{M(Oxidation (M))|F}V]{I|L}G[RP] 4.8773;4.517;4.1612;4.1612;4.1215;3.7556;3.3998;3.3998;0.77551 -;-;-;-;-;-;-;-;- 333 + 1 1.135 60764.4 1.0 11733 4981 16704 HBL1_DMSO_200M_050219_2,16716 HBL1_DMSO_200M_050219_2,16716,SIAGIFKEV True True SIAGIFKEV 88.364552 482.279528796673 4905345.0 16704.0 nc|ENSG00000080189|Q9NQQ7-3|SLC35C2;;ENSG00000080189|ENST00000372230|SLC35C2;;ENST00000493599.1_1_20:44979343-44980935:-|nuORF;;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;;ENST00000480329.5_1_20:44979343-44983832:-|nuORF 5.070771376291911 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16717 88.368 161.0 650790.0 25 0 281580.0 26862 PCEDGGGG 8 66 346.1225150929467 690.2304772526934 2 346.1225463747978 MULTI CID FTMS 0 0 0 16704 450991.78125 0.5191851249599776 1 -0.05108642578125 13 Unmodified _PCEDGGGG_ ENSG00000229544|ENST00000451024|NKX1-2 0.0 0.8243325171867699 4 V 1 8 10.797 0.0 0.0 1.5642 0.0 0.0 59.04791322646981 529.091377876407 588.1392911028769 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 V 1.5642 - 3 + 1 1.135 88339.3 1.0 11734 4981 16704 HBL1_DMSO_200M_050219_2,16717 HBL1_DMSO_200M_050219_2,16717,PCEDGGGG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16718 88.371 141.0 478000.0 25 0 73837.0 + 1634 ALMAAPLSL 9 78 451.75274496202985 901.4909369908596 2 451.7529479861259 MULTI CID FTMS 0 0 0 16704 444312.125 0.0342109535509854 66 -6.8473663330078125 14 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 49.66892048692302 0.0410958345688192 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 3 + 63.082 0.0 0.0 6.9975 6.9975 81.405 0.0 0.0 0.0 12.73719058643536 8.384767769392738 8.384767769392738 3.0102999566398125 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}ASP{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[TV]|[{I|L}S]}MASP{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[PA]YPAS{I|L}A{I|L} 6.9975;6.6636;6.2271;5.5846;5.2507;4.8668;4.8142;4.5269;4.3376;3.2029 -;-;-;-;-;-;-;-;-;- 256 1 1.135 59197.3 1.0 11735 4981 16704 HBL1_DMSO_200M_050219_2,16718 HBL1_DMSO_200M_050219_2,16718,ALMAAPLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16719 88.373 88.0 654860.0 25 0 74751.0 + 3310 RVFSDIIYTV 10 55 606.8349128677609 1211.6552728023216 2 606.8352538943291 MULTI CID FTMS 0 0 0 16704 409845.84375 0.0700269361251671 -3 0.39959716796875 15 Unmodified _AYLAWLIYSI_ ENSG00000125676|ENST00000245838|THOC2 36.04419817259434 0.1993394420055842 4 YTV 3 9 34.157 0.0 0.0 2.819 0.0 0.0 830.4669010755623 0.0 830.4669010755623 0.0 6.709412807357751 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.0 YTV 2.819 - 61 + 1 1.135 47579.1 1.0 11736 4981 16704 HBL1_DMSO_200M_050219_2,16719 HBL1_DMSO_200M_050219_2,16719,AYLAWLIYSI False False RVFSDIIYTV 88.372517 606.835253894329 87682616.0 16704.0 ENSG00000125676|ENST00000245838|THOC2 5.807426929473877 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16720 88.375 135.0 297680.0 25 0 28383.0 40081 VGHPALQDSV 10 65 511.7681566093315 1021.5217602854632 2 511.7683593630791 MULTI CID FTMS 0 0 0 16704 313173.59375 0.2259645113087385 1 -0.05108642578125 16 Unmodified _VGHPALQDSV_ ENST00000371432.7_1_6:45517039-45517156:+|nuORF 20.453626601364224 0.5043500229302764 4 [VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}GWSV 9 6 + 28.108 0.0 0.0 2.7516 2.7516 66.442 0.0 0.0 0.0 5.417663570913874 10.951531804599991 5.417663570913874 3.0102999566398125 0 0.7429928190999391 0.958607314841775 0.0 0.0 [VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}GWSV;[VS][Q{I|L}]{M(Oxidation (M))|F}GWSV;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}G{[DA]|[EG]}SV;[VS][Q{I|L}]{M(Oxidation (M))|F}G{[DA]|[EG]}SV 2.7516;2.4569;1.8502;1.5555 -;-;-;- 63 1 1.135 38203.9 1.0 11737 4981 16704 HBL1_DMSO_200M_050219_2,16720 HBL1_DMSO_200M_050219_2,16720,VGHPALQDSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16721 88.381 322.0 347040.0 25 0 16152.0 -1 0 119 966.9640784805124 1931.913604027825 2 967.4607421755792 MULTI CID FTMS 0 0 0 16704 285878.6875 0.1183092262210834 4 -0.3929672241210937 17 4 [NP]{I|L}[HS]TV[VS]QDAD{I|L}NP[EP] 18 -1 + 85.557 0.0 0.0 4.4286 4.4286 68.843 0.0 0.0 0.0 14.131806016604358 7.727562184969372 7.727562184969372 1.7609125905568137 0 0.0 1.0457574905606752 1.274227503252014 1.841129063296272 [NP]{I|L}[HS]TV[VS]QDAD{I|L}NP[EP];[NP]{I|L}[HS]TV{[TV]|[{I|L}S]}NDAD{I|L}NP[EP];[NP]{I|L}N[NP]V[VS]QDAD{I|L}NP[EP];[NP]{I|L}[HS]TV[WK]DAD{I|L}N[WH];[NP]{I|L}[HS]TV[{M(Oxidation (M))|F}E]G{M(Oxidation (M))|F}{I|L}QS{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}[HS]TV[{M(Oxidation (M))|F}E]G{M(Oxidation (M))|F}{I|L}KS{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}[HS]T[W{I|L}]NDAD{I|L}NP[EP];[NP]{I|L}N[NP]V{[TV]|[{I|L}S]}NDAD{I|L}NP[EP];[NP]{I|L}[HS]TV[{M(Oxidation (M))|F}E]G{M(Oxidation (M))|F}{I|L}QSD{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[HS]TV[{M(Oxidation (M))|F}E]G{M(Oxidation (M))|F}{I|L}KSD{[QN]|[E{I|L}]|[KN]} 4.4286;4.3375;3.8308;3.8233;3.8113;3.8113;3.7568;3.7396;3.7202;3.7202 -;-;-;-;-;-;-;-;-;- 19316 1 1.135 76127.6 1.0 11738 4981 16704 HBL1_DMSO_200M_050219_2,16721 HBL1_DMSO_200M_050219_2,16721, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16722 88.386 237.0 425380.0 25 0 60557.0 + 9441 FLASESLIKQI 11 104 624.8634718669184 1247.7123908006367 2 624.8637573122978 MULTI CID FTMS 0 0 0 16704 218419.515625 0.2903755109617264 -2 0.2824554443359375 18 Unmodified _FLASESLIKQI_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 125.0377797344192 0.0507112935595279 4 {M(Oxidation (M))|F}{I|L}ASES{I|L}{I|L}KQ{I|L} 11 0 + 96.143 0.0 0.0 7.7056 7.7056 93.262 0.0 0.0 0.0 41.45272813510248 15.677970138531975 15.677970138531975 12.183120116851882 0 1.610924374808178 0.0 1.0189301784845295 1.416386562212267 + + {M(Oxidation (M))|F}{I|L}ASES{I|L}{I|L}KQ{I|L};{M(Oxidation (M))|F}{I|L}ASES{I|L}{I|L}K[AG]{I|L};{M(Oxidation (M))|F}{I|L}{[WT]|[RM]}S{I|L}{I|L}KQ{I|L};[{I|L}A]GK{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SA{I|L}E;{M(Oxidation (M))|F}{I|L}{[WT]|[RM]}S{I|L}{I|L}K[AG]{I|L};{M(Oxidation (M))|F}{I|L}{[QN]|[E{I|L}]|[KN]}[MN]{I|L}KQ{I|L};[Q{I|L}]K{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SA{I|L}E;{[TV]|[{I|L}S]}{I|L}G[KA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SA{I|L}E;[K{I|L}]Q{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SA{I|L}E;[KQ]{I|L}{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SA{I|L}E 7.7056;6.7291;5.1822;4.2536;4.2028;4.0878;3.9803;3.7997;3.6854;3.6823 +;-;-;-;-;-;-;-;-;- + 3474 + 1 1.135 81716.4 1.0 11739 4981 16704 HBL1_DMSO_200M_050219_2,16722 HBL1_DMSO_200M_050219_2,16722,FLASESLIKQI True True FLASESLIKQI 88.385617 624.863757312298 12120950.0 16704.0 ENST00000478340.2_1_6:35437033-35438524:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;;ENSG00000198755|ENST00000322203|RPL10A 4.719505627950032 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16723 88.389 197.0 377670.0 25 0 40354.0 + 16934 KILETLYTL 9 118 547.3287745587917 1092.6429961843833 2 547.3291503787041 MULTI CID FTMS 0 0 0 16704 161526.46875 0.925472380438598 -1 0.1946640014648437 19 Unmodified _KILETLYTL_ ENSG00000151553|ENST00000369248|FHIP2A;nc|ENSG00000151553|Q5W0V3-2|FHIP2A 29.081581746732265 0.1611639662936252 4 [{I|L}T]E[K{I|L}]{I|L}YT{I|L} 9 4 + 32.914 0.0 0.0 3.0123 3.0123 63.612 0.0 0.0 0.0 1.2493873660830026 2.433014397279728 1.2493873660830026 1.2493873660830026 0 0.7742275032520141 1.0457574905606752 0.9361818737241734 0.0 [{I|L}T]E[K{I|L}]{I|L}YT{I|L};{[QN]|[E{I|L}]|[KN]}T[K{I|L}]{I|L}YT{I|L};{I|L}{I|L}K{[ET]|[MV]}{I|L}YT{I|L};[{I|L}T]Y{[QN]|[E{I|L}]|[KN]}[K{I|L}]T{I|L};[{I|L}T]E[Y{I|L}][K{I|L}]T{I|L};[{I|L}T]Y[VS]{I|L}[{I|L}A]T{I|L};{[QN]|[E{I|L}]|[KN]}T[Y{I|L}][K{I|L}]T{I|L};[{M(Oxidation (M))|F}V][K{I|L}]P{I|L}YT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R{I|L}[VS]YPV;[YT]{I|L}{[QN]|[E{I|L}]|[KN]}[K{I|L}]T{I|L} 3.0123;2.898;1.7148;1.3546;1.3389;1.3128;1.2245;1.0373;0.97731;0.91797 -;-;-;-;-;-;-;-;-;- 642 1 1.135 62896.6 1.0 11740 4981 16704 HBL1_DMSO_200M_050219_2,16723 HBL1_DMSO_200M_050219_2,16723,KILETLYTL False True KILETLYTL 88.3894 547.329150378704 1647338.625 16704.0 nc|ENSG00000151553|Q5W0V3-2|FHIP2A;;ENSG00000151553|ENST00000369248|FHIP2A 1.835411866505941 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16724 88.393 177.0 343290.0 25 0 37439.0 -1 PLQDMYNCL 9 84 556.7392322609817 1111.4639115887633 2 557.2409545779228 MULTI CID FTMS 0 0 0 16704 163660.78125 0.951781351144982 -2 0.2824554443359375 20 Oxidation (M) _PLQDM(Oxidation (M))YNCL_ ENSG00000180182|ENST00000324817|MED14 12.531546534597751 0.4974689918368763 4 G{I|L} 2 -1 16.198 0.0 0.0 1.4573 0.0 0.0 923.3475613463788 0.0 923.3475613463788 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L} 1.4573 - 83 + 1 1.135 52496.1 1.0 11741 4981 16704 HBL1_DMSO_200M_050219_2,16724 HBL1_DMSO_200M_050219_2,16724,PLQDMYNCL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16726 88.398 59.0 446190.0 25 0 53970.0 + 3941 DALLEQAMI 9 61 502.26073972145065 1002.5069265097012 2 502.2603637576103 MULTI CID FTMS 0 0 0 16725 444850.1875 0.5735021737976108 2 -0.2318267822265625 1 Unmodified _DALLEQAMI_ ENSG00000008838|ENST00000394128|MED24;ENST00000581054.1_1_17:38192365-38210656:-|nuORF;nc|ENSG00000008838|O75448-2|MED24 11.640296217721598 0.521594087909532 4 {[DA]|[EG]}{I|L}A 4 5 13.743 0.0 0.0 1.3708 0.0 0.0 0.0 629.300297441595 629.300297441595 0.2479108830623424 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 {[DA]|[EG]}{I|L}A 1.3708 - 27 1 1.135 26792.7 1.0 11742 4982 16725 HBL1_DMSO_200M_050219_2,16726 HBL1_DMSO_200M_050219_2,16726,DALLEQAMI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16727 88.4 137.0 483110.0 25 0 63648.0 + 12373 GTFDNIYLHV 10 95 589.7955465170278 1177.5765401008557 2 589.7958251833916 MULTI CID FTMS 0 0 0 16725 435940.25 0.801374840343586 1 -0.1330108642578125 2 Unmodified _GTFDNIYLHV_ ENSG00000121579|ENST00000240922|NAA50 29.081581746732265 0.3152867722954398 4 {[SA]|[TG]}{M(Oxidation (M))|F}DN{I|L}Y{I|L}[HV] 10 0 + 66.898 0.0 0.0 5.681 5.681 83.621 0.0 0.0 0.0 30.19862697849564 7.269987279362624 7.269987279362624 9.164539485499256 0 0.3252574989159953 1.5228787452803376 0.0 0.0 + + {[SA]|[TG]}{M(Oxidation (M))|F}DN{I|L}Y{I|L}[HV];{[SA]|[TG]}{M(Oxidation (M))|F}DGG{I|L}Y{I|L}[HV];{[SA]|[TG]}[PS]Y{I|L}H{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}{M(Oxidation (M))|F}[WP]Q{[QV]|[N{I|L}]|[RA]|[KV]}{[ES]|[DT]|[{I|L}C]};{[QV]|[N{I|L}]|[RA]|[KV]}[R{M(Oxidation (M))|F}]{I|L}ND{[WT]|[RM]};{[SA]|[TG]}{M(Oxidation (M))|F}[WP]{I|L}{I|L}T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KA][PA]Y{I|L}ND{[WT]|[RM]};{[SA]|[TG]}{M(Oxidation (M))|F}[WP]{I|L}{I|L}E{[ES]|[DT]|[{I|L}C]};{[QV]|[N{I|L}]|[RA]|[KV]}DY{I|L}H{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}[R{M(Oxidation (M))|F}]Q[WP]{[WT]|[RM]} 5.681;4.9027;2.3907;2.3825;2.3413;2.2407;2.114;2.1063;1.9946;1.9476 +;-;-;-;-;-;-;-;-;- + 502 + 1 1.135 54483.9 1.0 11743 4982 16725 HBL1_DMSO_200M_050219_2,16727 HBL1_DMSO_200M_050219_2,16727,GTFDNIYLHV False True GTFDNIYLHV 88.400421 589.795825183392 10186000.0 16725.0 ENSG00000121579|ENST00000240922|NAA50 7.146504084269206 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16728 88.402 31.0 2237200.0 25 0 164690.0 + 29609 QLVRDLLEV 9 79 542.8205584574885 1083.6265639817768 2 542.8220092654228 MULTI CID FTMS 0 0 0 16725 1738406.375 0.6777405501806967 1 -0.1330108642578125 3 Unmodified _QLVRDLLEV_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 103.35351024395868 0.0092202910191236 4 [Q{I|L}]{[QN]|[E{I|L}]|[KN]}Q{I|L}{I|L}EV 9 3 + 73.768 0.0 0.0 6.8076 6.8076 82.933 0.0 0.0 0.0 4.286662482156345 14.973024840566469 4.286662482156345 4.286662482156345 0 0.7302046884880937 1.5228787452803376 1.6861818737241734 1.805462187404089 [Q{I|L}]{[QN]|[E{I|L}]|[KN]}Q{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[Q{I|L}]Q{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[RV]Q{I|L}{I|L}EV;[Q{I|L}]{[QN]|[E{I|L}]|[KN]}[AG]{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[Q{I|L}][AG]{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[RV][AG]{I|L}{I|L}EV;[Q{I|L}]V[WP]{I|L}{I|L}C{I|L} 6.8076;6.412;6.0025;5.9578;5.5622;5.1528;0.74098 -;-;-;-;-;-;- 138 1 1.135 63092.0 1.0 11744 4982 16725 HBL1_DMSO_200M_050219_2,16728 HBL1_DMSO_200M_050219_2,16728,QLVRDLLEV True True QLVRDLLEV 88.4016 542.822009265423 25532178.0 16725.0 ENSG00000109320|ENST00000226574|NFKB1;;nc|ENSG00000109320|P19838|NFKB1;;nc|ENSG00000109320|P19838-3|NFKB1 5.582815011342366 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16729 88.405 155.0 497770.0 25 0 73720.0 19877 LHPLDLAVL 9 98 495.80290195342 989.59125097364 2 495.8031188845634 MULTI CID FTMS 0 0 0 16725 387486.3125 0.7941419204797606 -2 0.2457504272460937 4 Unmodified _LHPLDLAVL_ ENST00000538185.1_1_11:61256765-61256957:+|nuORF 29.081581746732265 0.1611639662936252 4 [H{I|L}]PEA{I|L}VV{I|L} 9 3 + 77.814 0.0 0.0 7.8633 7.8633 83.579 0.0 0.0 0.0 8.411290632962718 16.478174818886373 8.411290632962718 3.0102999566398125 0 0.9247425010840048 1.0457574905606752 0.3494850021680094 0.0 [H{I|L}]PEA{I|L}VV{I|L};[H{I|L}]EPA{I|L}VV{I|L};[H{I|L}]PEAV{I|L}V{I|L};[H{I|L}]PE{I|L}AVV{I|L};[H{I|L}]EPAV{I|L}V{I|L};[H{I|L}]EAP{I|L}VV{I|L};[H{I|L}]EP{I|L}AVV{I|L};[H{I|L}]PE{I|L}G{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EA{I|L}VV{I|L};[H{I|L}]EAPV{I|L}V{I|L} 7.8633;7.5591;7.5591;7.3811;7.2549;7.2549;7.0769;7.0769;7.0133;6.9507 -;-;-;-;-;-;-;-;-;- 669 1 1.135 63371.7 1.0 11745 4982 16725 HBL1_DMSO_200M_050219_2,16729 HBL1_DMSO_200M_050219_2,16729,LHPLDLAVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16730 88.419 800.0 93392.0 25 0 19843.0 -1 0 58 1156.4983248050569 3466.4731450153704 3 1157.168383777142 MULTI CID FTMS 0 0 0 16725 240504.328125 1.0 0 0.0 5 4 QPN 3 -1 15.802 0.0 0.0 0.45585 0.0 0.0 2498.941847263221 625.3492525690061 3124.291099832227 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 QPN 0.45585 - 70 + 1 1.135 65863.6 0.8999999761581421 11746 4982 16725 HBL1_DMSO_200M_050219_2,16730 HBL1_DMSO_200M_050219_2,16730, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16731 88.43 657.0 433420.0 25 0 59854.0 15929 ISYFYCDCI 9 185 563.7342247140124 1125.453896494825 2 563.7347900271416 MULTI CID FTMS 0 0 0 16725 203892.40625 0.8776057075549294 -2 0.2457504272460937 6 Unmodified _ISYFYCDCI_ ENSG00000150261|ENST00000279783|OR8K1 28.486842064014134 0.1687311288560894 4 {I|L}STE{I|L} 5 6 33.403 0.0 0.0 2.968 0.0 0.0 0.0 579.1417940729124 579.1417940729124 10.929206263678935 0.0 0.0 0.0 0 0.1989700043360188 0.4436974992327127 1.16944517631652 0.0 {I|L}STE{I|L} 2.968 - 777 + 1 1.135 217970.6 1.0 11747 4982 16725 HBL1_DMSO_200M_050219_2,16731 HBL1_DMSO_200M_050219_2,16731,ISYFYCDCI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16732 88.434 218.0 196850.0 25 0 21464.0 + 954 AFLGVKERL 9 74 516.813376384832 0 516.8140136599541 PEAK CID FTMS 0 0 0 16725 161479.90625 1.0 0 0.0 7 Unmodified _AFLGVKERL_ REV__ENSG00000116584|ENST00000361247|ARHGEF2;REV__nc|ENSG00000116584|Q92974-2|ARHGEF2;REV__nc|ENSG00000116584|Q92974-3|ARHGEF2 21.74664581756881 0.185237546287679 4 {I|L}V 2 -1 15.217 0.0 0.0 1.475 0.0 0.0 218.1051232995217 598.3319796197874 816.4371029193092 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}V 1.475 - 26 + 1 1.135 41534.5 1.0 11748 4982 16725 HBL1_DMSO_200M_050219_2,16732 HBL1_DMSO_200M_050219_2,16732,AFLGVKERL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16733 88.439 289.0 307000.0 25 0 32488.0 + 1475 ALGAASLLLGV 11 135 492.808205981318 983.601859029436 2 492.8078796267509 MULTI CID FTMS 0 0 0 16725 152037.859375 0.2067749842811092 5 -0.564849853515625 8 Unmodified _ALGAASLLLGV_ REV__ENST00000344079.9_2_10:134145687-134147072:+|nuORF 37.97399986684836 0.2436054658898253 4 [{I|L}A]QA[{I|L}T]V 7 -1 29.983 0.0 0.0 3.0483 0.0 0.0 0.0 284.16042771523604 284.16042771523604 1.6002285575834847 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.805462187404089 0.0 [{I|L}A]QA[{I|L}T]V 3.0483 - 2277 1 1.135 70587.8 1.0 11749 4982 16725 HBL1_DMSO_200M_050219_2,16733 HBL1_DMSO_200M_050219_2,16733,ALGAASLLLGV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16734 88.446 343.0 264200.0 25 0 20983.0 + 42765 VVHEDLRLLL 10 100 402.9118068699669 1205.7135912101007 3 402.9114868044853 MULTI CID FTMS 0 0 0 16725 146819.578125 1.0 0 0.0 9 Unmodified _VVHEDLRLLL_ ENSG00000101361|ENST00000329276|NOP56 37.250883937326 0.1865971120352015 4 [{I|L}A]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AVV{I|L}{I|L}{I|L} 11 8 + 53.281 0.0 0.0 4.419 4.419 66.884 0.0 0.0 0.0 0.7356805270559619 14.19016691817962 0.7356805270559619 0.7356805270559619 0 1.110924374808178 1.0 0.2742275032520141 0.0 [{I|L}A]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AVV{I|L}{I|L}{I|L};VVS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AVV{I|L}{I|L}{I|L};[{I|L}A]T{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A{I|L}VV{I|L}{I|L};[{I|L}A]TV{[YC]|[HE]}VV{I|L}{I|L}{I|L};VVS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A{I|L}VV{I|L}{I|L};VVSV{[YC]|[HE]}VV{I|L}{I|L}{I|L};[{I|L}A]S[HN]QVV{I|L}{I|L}{I|L};[{I|L}A]TV{[YC]|[HE]}{I|L}VV{I|L}{I|L};{[TV]|[{I|L}S]}A[HN]QVV{I|L}{I|L}{I|L};VVSV{[YC]|[HE]}{I|L}VV{I|L}{I|L} 4.419;4.358;4.089;4.0667;4.028;4.0057;3.8393;3.7367;3.7312;3.6757 -;-;-;-;-;-;-;-;-;- 884 1 1.135 73049.4 1.0 11750 4982 16725 HBL1_DMSO_200M_050219_2,16734 HBL1_DMSO_200M_050219_2,16734,VVHEDLRLLL False True VVHEDLRLLL 88.445639 402.911486804485 1001446.0 16725.0 ENSG00000101361|ENST00000329276|NOP56 3.874213774998983 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16735 88.461 800.0 219320.0 25 0 29830.0 + 21463 LPHLVVSI 8 156 439.2786665730287 876.5427802128573 2 439.2789794802666 MULTI CID FTMS 0 0 0 16725 135722.421875 0.13567903002521 -4 0.45068359375 10 Unmodified _LPHLVVSI_ ENSG00000119285|ENST00000366582|HEATR1 56.04830969593885 0.114297258605095 4 [H{I|L}]P{I|L}VVS{I|L} 8 2 + 63.81 0.0 0.0 7.2798 7.2798 79.764 0.0 0.0 0.0 4.392653074926045 14.904630595263413 4.392653074926045 1.7609125905568137 0 0.9247425010840048 1.0457574905606752 0.5 0.0 [H{I|L}]P{I|L}VVS{I|L};[H{I|L}]PV{I|L}VS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}VVS{I|L};[H{I|L}]VP{I|L}VS{I|L};[H{I|L}]PVV{I|L}S{I|L};[{I|L}P]H{I|L}VVS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}VS{I|L};[{I|L}P]HV{I|L}VS{I|L};[H{I|L}]VPV{I|L}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VV{I|L}S{I|L} 7.2798;7.0789;6.7786;6.7354;6.7354;6.6832;6.5777;6.4823;6.392;6.2343 -;-;-;-;-;+;-;-;-;- + 863 1 1.135 140288.0 0.9900000095367432 11751 4982 16725 HBL1_DMSO_200M_050219_2,16735 HBL1_DMSO_200M_050219_2,16735,LPHLVVSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16736 88.474 800.0 392010.0 25 0 16740.0 -1 0 134 943.475313160726 1884.936073388252 2 943.4792358279228 MULTI CID FTMS 0 0 0 16725 132701.734375 0.431319222940796 -4 0.45068359375 11 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F}D[MD]G{I|L}T{I|L} 11 -1 49.313 0.0 0.0 2.6162 0.0 0.0 0.0 649.321304401867 649.321304401867 0.7318304582962298 0.0 0.0 0.0 0 0.5629529932484498 1.0 0.3054621874040891 1.2704924158037798 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F}D[MD]G{I|L}T{I|L} 2.6162 - 10899 1 1.135 201917.3 0.449999988079071 11752 4982 16725 HBL1_DMSO_200M_050219_2,16736 HBL1_DMSO_200M_050219_2,16736, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16737 88.479 234.0 220680.0 25 0 29917.0 9845 FPETTKKEV 9 92 539.7927518605692 1077.5709507879385 2 539.7925903201103 MULTI CID FTMS 0 0 0 16725 125425.140625 1.0 0 0.0 12 Unmodified _FPETTKKEV_ ENSG00000176927|ENST00000394835|EFCAB5;nc|ENSG00000176927|A4FU69-2|EFCAB5;nc|ENSG00000176927|A4FU69-3|EFCAB5;nc|ENSG00000176927|A4FU69-4|EFCAB5;nc|ENSG00000176927|A4FU69-5|EFCAB5;nc|ENSG00000176927|A4FU69-6|EFCAB5 13.50788311687929 0.4710407108020397 4 AE{I|L}[DN] 5 8 19.437 0.0 0.0 1.8038 0.0 0.0 517.3113880841812 0.0 517.3113880841812 0.0 3.3353614059068803 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 AE{I|L}[DN] 1.8038 - 94 1 1.135 46130.2 1.0 11753 4982 16725 HBL1_DMSO_200M_050219_2,16737 HBL1_DMSO_200M_050219_2,16737,FPETTKKEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16738 88.494 800.0 144820.0 25 0 17870.0 + 24795 MPILISKI 8 135 457.79094806280426 913.5673431924084 2 457.7911559939384 MULTI CID FTMS 0 0 0 16725 119471.6171875 1.0 0 0.0 13 Unmodified _MPILISKI_ ENSG00000101400|ENST00000217381|SNTA1;ENSG00000168807|ENST00000336278|SNTB2;ENSG00000172164|ENST00000517992|SNTB1;ENST00000519177.5_1_8:121583594-121823792:-|nuORF;nc|ENSG00000101400|Q13424-2|SNTA1;nc|ENSG00000168807|Q13425-2|SNTB2;nc|ENSG00000172164|Q13884-2|SNTB1 49.93300154707207 0.1395624531867191 4 MP{I|L}{I|L}{I|L}SK{I|L} 8 0 + 57.87 0.0 0.0 6.3345 6.3345 74.626 0.0 0.0 0.0 14.047130279366002 0.7268250975604218 0.7268250975604218 0.7268250975604218 0 0.8441876774005248 1.0457574905606752 0.4916440611282626 0.0 + + MP{I|L}{I|L}{I|L}SK{I|L};MP{I|L}{I|L}{I|L}KTV;MP{I|L}{I|L}{I|L}KS{I|L};MP{I|L}{I|L}[KT]{I|L}V;MP{I|L}{I|L}[KT]V{I|L};{[TV]|[{I|L}S]}K{M(Oxidation (M))|F}P{I|L}{I|L}P;[{I|L}P][HK]P{I|L}{I|L}P;{[TV]|[{I|L}S]}K{M(Oxidation (M))|F}{I|L}P{I|L}P;[{I|L}P][HK]{I|L}P{I|L}P;{[TV]|[{I|L}S]}K{I|L}M{I|L}{I|L}P 6.3345;6.2549;6.0315;5.2078;4.9844;4.7968;4.3613;4.3613;3.9257;3.6156 +;-;-;-;-;-;-;-;-;- + 961 + 1 1.135 94330.5 0.4699999988079071 11754 4982 16725 HBL1_DMSO_200M_050219_2,16738 HBL1_DMSO_200M_050219_2,16738,MPILISKI False True MPILISKI 88.493877 457.791155993938 1222531.0 16725.0 ENSG00000172164|ENST00000517992|SNTB1;;ENST00000519177.5_1_8:121583594-121823792:-|nuORF;;nc|ENSG00000101400|Q13424-2|SNTA1;;nc|ENSG00000168807|Q13425-2|SNTB2;;ENSG00000101400|ENST00000217381|SNTA1;;nc|ENSG00000172164|Q13884-2|SNTB1;;ENSG00000168807|ENST00000336278|SNTB2 -0.4675102836141984 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16739 88.505 609.0 153800.0 25 0 18877.0 + 34828 SQFPGAITL 9 118 467.2557031428642 932.4968533525284 2 467.2551452517509 MULTI CID FTMS 0 0 0 16725 112040.1171875 0.3747635047910532 9 -0.9589004516601562 14 Unmodified _SQFPGAITL_ ENST00000263083.10_1_17:1944800-1946395:+|nuORF;ENST00000571710.5_1_17:1945525-1946395:+|nuORF;nc|ENSG00000262664|Q8WZ82|OVCA2 29.081581746732265 0.1611639662936252 4 {[VA]|[{I|L}G]}APGAYAT{I|L} 10 5 {[VA]|[{I|L}G]}APGAY + + 21.911 19.473 3.0943 2.3497 2.3497 44.922 0.0 0.0 0.0 0.0 5.53604984823934 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[VA]|[{I|L}G]}APGAYAT{I|L} 2.3497 - 571 + 1 1.135 77782.9 1.0 11755 4982 16725 HBL1_DMSO_200M_050219_2,16739 HBL1_DMSO_200M_050219_2,16739,SQFPGAITL False True False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 16740 88.512 422.0 232290.0 25 0 22553.0 -1 LFLCNMICL 9 115 592.2860409423396 1182.557528951479 2 592.2844116091728 MULTI CID FTMS 0 0 0 16725 105946.859375 0.745096205619595 -1 0.05108642578125 15 2 Carbamidomethyl (C) _LFLC(Carbamidomethyl (C))NMIC(Carbamidomethyl (C))L_ ENST00000355765.10_1_14:45584217-45584328:+|nuORF 13.50788311687929 0.4710407108020397 4 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}NVV 9 -1 44.103 0.0 0.0 3.7294 0.0 0.0 0.0 127.93457908259155 127.93457908259155 26.962724883926647 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}NVV 3.7294 - 331 1 1.135 78832.8 1.0 11756 4982 16725 HBL1_DMSO_200M_050219_2,16740 HBL1_DMSO_200M_050219_2,16740,LFLCNMICL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16741 88.526 800.0 147150.0 25 0 16451.0 8612 EVDYLEQFGT 10 153 600.7730605866838 1199.5315682401674 2 600.7744628787041 MULTI CID FTMS 0 0 0 16725 93938.1875 0.1575860675224621 2 -0.2318267822265625 16 Unmodified _EVDYLEQFGT_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 12.240655878213236 0.6421556946785427 4 [YG]{I|L}{I|L}W{I|L}D 7 8 16.017 0.0 0.0 1.3353 0.0 0.0 0.0 336.0686009845928 336.0686009845928 -0.7614195049016423 0.0 -0.7614195049016423 0.0 0 0.4247425010840047 1.0969100130080565 0.0 0.0 [YG]{I|L}{I|L}W{I|L}D 1.3353 - 1330 1 1.135 85277.4 0.5099999904632568 11757 4982 16725 HBL1_DMSO_200M_050219_2,16741 HBL1_DMSO_200M_050219_2,16741,EVDYLEQFGT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16743 88.531 29.0 1710900.0 25 0 453480.0 + 16422 DARTFYII 8 57 499.7694131733822 997.5242734135644 2 499.7694274783134 MULTI CID FTMS 0 0 0 16742 1532038.875 0.3514938165501207 2 -0.2088699340820312 1 Unmodified _IYWGAYLL_ ENSG00000181029|ENST00000596148|TRAPPC5 17.086550045450526 0.6584923310065985 4 Y{I|L}{I|L} 3 5 32.435 0.0 0.0 3.2516 0.0 0.0 590.2815025272265 0.0 590.2815025272265 0.0 21.46591250700361 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + Y{I|L}{I|L} 3.2516 + + 23 1 1.146 42735.2 1.0 11758 4983 16742 HBL1_DMSO_200M_050219_2,16743 HBL1_DMSO_200M_050219_2,16743,IYWGAYLL False False DARTFYII 88.530708 499.769427478313 41483436.0 16742.0 ENSG00000181029|ENST00000596148|TRAPPC5 0.9572075605392456 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16744 88.532 30.0 2038700.0 25 0 255650.0 + 45763 YYISPRLTF 9 63 580.3110719907387 1158.6075910482773 2 580.3115722537041 MULTI CID FTMS 0 0 0 16742 1117267.875 0.0457536716196552 4 -0.4318389892578125 2 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 12.240655878213236 0.5053430591993562 4 YY{I|L}S 4 5 56.186 0.0 0.0 4.8494 0.0 0.0 0.0 629.3412229589909 629.3412229589909 45.47228775315752 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + YY{I|L}S 4.8494 + + 28 + 1 1.146 53214.5 1.0 11759 4983 16742 HBL1_DMSO_200M_050219_2,16744 HBL1_DMSO_200M_050219_2,16744,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16745 88.533 63.0 934720.0 25 0 135190.0 + 26589 NVPEGLLATV 10 85 506.7876962683274 1011.5608396034548 2 506.7876464724541 MULTI CID FTMS 0 0 0 16742 955149.875 0.9224207161050452 2 -0.2088699340820312 3 Unmodified _NVPEGLLATV_ ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000075673|ENST00000381946|ATP12A;ENSG00000105409|ENST00000648268|ATP1A3;ENSG00000132681|ENST00000368081|ATP1A4;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENST00000485672.2_1_19:42488766-42489464:-|nuORF;nc|ENSG00000075673|P54707-2|ATP12A;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;nc|ENSG00000163399|P05023-2|ATP1A1;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1 31.26834338654808 0.266153677697784 4 [PA]D{I|L}{I|L}ATVNV 10 6 + 60.029 0.0 0.0 5.9343 5.9343 78.715 0.0 0.0 0.0 3.679767852945943 9.917114474659208 3.679767852945943 3.679767852945943 0 0.3182503180159344 1.2218487496163564 0.8252574989159953 0.0 [PA]D{I|L}{I|L}ATVNV;[EP]G{I|L}{I|L}ATVNV;[PA]D{I|L}{I|L}AAAATV;[EP]G{I|L}{I|L}AAAATV;[PA]D{I|L}{I|L}A{[NV]|[RG]}TV;[PA]D{I|L}{I|L}{[NV]|[RG]}ATV;[EP]G{I|L}{I|L}A{[NV]|[RG]}TV;[PA]D{I|L}{[NV]|[RG]}{I|L}ATV;[EP]G{I|L}{I|L}{[NV]|[RG]}ATV;{[TV]|[{I|L}S]}AP{I|L}AEVNV 5.9343;5.5705;4.9539;4.5901;4.3038;3.9823;3.9401;3.6847;3.6185;3.3212 -;-;-;-;-;-;-;-;-;- 536 1 1.146 51343.5 1.0 11760 4983 16742 HBL1_DMSO_200M_050219_2,16745 HBL1_DMSO_200M_050219_2,16745,NVPEGLLATV False True NVPEGLLATV 88.533414 506.787646472454 16144851.0 16742.0 ENSG00000075673|ENST00000381946|ATP12A;;ENST00000485672.2_1_19:42488766-42489464:-|nuORF;;ENSG00000105409|ENST00000648268|ATP1A3;;ENSG00000163399|ENST00000295598|ATP1A1;;ENSG00000132681|ENST00000368081|ATP1A4;;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;;nc|ENSG00000163399|P05023-2|ATP1A1;;nc|ENSG00000163399|P05023-4|ATP1A1;;nc|ENSG00000075673|P54707-2|ATP12A;;nc|ENSG00000105409|P13637-3|ATP1A3;;ENSG00000018625|ENST00000361216|ATP1A2;;nc|ENSG00000163399|P05023-3|ATP1A1;;nc|ENSG00000105409|P13637-2|ATP1A3 5.677978833516439 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16746 88.535 69.0 1110900.0 25 0 164320.0 + 9191 FGGVLILIHR 10 71 375.5693297980315 1123.6861599942945 3 375.5693237185478 MULTI CID FTMS 0 0 0 16742 764216.25 0.0267016731132028 -3 0.3787612915039062 4 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 4 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 92.273 0.0 0.0 8.2116 8.2116 92.212 0.0 0.0 0.0 73.2319095436452 21.082268588648247 21.082268588648247 9.208187539523747 0 0.7742275032520141 2.0 0.0 0.9916440611282626 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 8.2116;7.3922 -;- 154 + 1 1.146 69204.3 1.0 11761 4983 16742 HBL1_DMSO_200M_050219_2,16746 HBL1_DMSO_200M_050219_2,16746,FGGVLILIHR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16747 88.537 79.0 758120.0 25 0 78596.0 + 23605 LTPLPPRQFA 10 77 570.3310999382613 1138.6476469433226 2 570.3317138552666 MULTI CID FTMS 0 0 0 16742 727134.6875 0.8108543896649154 -1 0.1330108642578125 5 Unmodified _LTPLPPRQFA_ REV__ENST00000280562.9_1_12:123476423-123479403:-|nuORF 10.073929032068715 0.6785112666868882 4 [{I|L}P]T{I|L}P{I|L} 6 -1 25.679 0.0 0.0 2.2552 0.0 0.0 0.0 501.219258749286 501.219258749286 15.925274605963049 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 [{I|L}P]T{I|L}P{I|L} 2.2552 - 71 1 1.146 51954.3 1.0 11762 4983 16742 HBL1_DMSO_200M_050219_2,16747 HBL1_DMSO_200M_050219_2,16747,LTPLPPRQFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16748 88.54 135.0 346230.0 25 0 41023.0 + 40316 VGYDKDFLTI 10 86 585.8049185980118 1169.5952842628235 2 585.8058959841728 MULTI CID FTMS 0 0 0 16742 414218.375 0.4820888640244851 2 -0.2088699340820312 6 Unmodified _VGYDKDFLTI_ ENSG00000123066|ENST00000281928|MED13L 37.07464296494664 0.1884581770199685 4 [{I|L}T][YQ]GD{M(Oxidation (M))|F}{I|L}T{I|L} 10 4 + 52.502 0.0 0.0 4.4889 4.4889 76.462 0.0 0.0 0.0 6.689367317080425 15.026975159433531 6.689367317080425 6.689367317080425 0 0.5 1.6989700043360187 0.2887254899964357 0.0 [{I|L}T][YQ]GD{M(Oxidation (M))|F}{I|L}T{I|L};[VG]{[YD]|[{M(Oxidation (M))|F}M]}KD{M(Oxidation (M))|F}{I|L}T{I|L};[VG]S[YV]GD{M(Oxidation (M))|F}{I|L}T{I|L};[VG]{[YD]|[{M(Oxidation (M))|F}M]}[SG]V{M(Oxidation (M))|F}{I|L}T{I|L};[Q{I|L}][YT]GD{M(Oxidation (M))|F}{I|L}T{I|L};[{I|L}T][YQ][{M(Oxidation (M))|F}E]GVT{I|L};[Q{I|L}][YG]TD{M(Oxidation (M))|F}{I|L}T{I|L};[{I|L}T][YQ][W{M(Oxidation (M))|F}]VT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YV]GD{M(Oxidation (M))|F}{I|L}T{I|L};[{I|L}T][YQ][{M(Oxidation (M))|F}E]RT{I|L} 4.4889;3.9169;3.8815;3.6481;3.3516;2.9925;2.9874;2.842;2.7894;2.6914 -;+;-;-;-;-;-;-;-;- + 562 1 1.146 45506.7 1.0 11763 4983 16742 HBL1_DMSO_200M_050219_2,16748 HBL1_DMSO_200M_050219_2,16748,VGYDKDFLTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16749 88.541 78.0 854200.0 25 0 96214.0 + 14697 IIVDEAICSM 10 102 547.2663040776981 1092.5180552221962 2 547.2676879763603 MULTI CID FTMS 0 0 0 16742 395825.6875 0.1098879821914178 -3 0.3787612915039062 7 Unmodified _IIVDEAICSM_ REV__ENSG00000181789|ENST00000314797|COPG1 25.399314129420983 0.3980215340001851 4 [TP]D{I|L}T{I|L}{I|L} 7 -1 51.335 0.0 0.0 4.6988 0.0 0.0 0.0 336.0641727361212 336.0641727361212 35.650764250747926 0.0 0.0 0.0 0 0.8494850021680094 0.9208187539523752 1.1861818737241734 0.0 [TP]D{I|L}T{I|L}{I|L} 4.6988 - 782 1 1.146 60010.0 1.0 11764 4983 16742 HBL1_DMSO_200M_050219_2,16749 HBL1_DMSO_200M_050219_2,16749,IIVDEAICSM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16750 88.544 130.0 543380.0 25 0 126610.0 40916 VLSLCMSL 8 85 433.2294538138792 864.4443546945583 2 433.2298461794853 MULTI CID FTMS 0 0 0 16742 367021.125 1.0 0 0.0 8 Unmodified _VLSLCMSL_ ENSG00000162009|ENST00000689027|SSTR5 28.17323086031832 0.4514957916281387 4 {[TV]|[{I|L}S]}V 3 6 24.978 0.0 0.0 2.8895 0.0 0.0 0.0 562.2362302651239 562.2362302651239 10.84243588502991 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 {[TV]|[{I|L}S]}V 2.8895 - 70 1 1.146 57754.3 1.0 11765 4983 16742 HBL1_DMSO_200M_050219_2,16750 HBL1_DMSO_200M_050219_2,16750,VLSLCMSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16751 88.547 176.0 375060.0 25 0 26274.0 + 1642 ALMPVLNQV 9 111 492.780954065238 983.547355197276 2 492.7810546755791 MULTI CID FTMS 0 0 0 16742 259230.15625 0.1843945172841747 -3 0.3787612915039062 9 Unmodified _ALMPVLNQV_ ENSG00000223496|ENST00000435634|EXOSC6 38.15118350030904 0.0856056900103839 4 [VP]{I|L}NQ 5 4 31.84 0.0 0.0 3.2372 0.0 0.0 0.0 429.2176792541698 429.2176792541698 3.2831611302024832 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.2887254899964357 + [VP]{I|L}NQ 3.2372 + + 551 1 1.146 55697.5 1.0 11766 4983 16742 HBL1_DMSO_200M_050219_2,16751 HBL1_DMSO_200M_050219_2,16751,ALMPVLNQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16752 88.553 318.0 383590.0 25 0 88408.0 + 2074 APNNNPAP 8 115 397.6926401409388 793.3707273486776 2 397.6929809451103 MULTI CID FTMS 0 0 0 16742 238968.15625 0.3170280776384496 -2 0.1840972900390625 10 Unmodified _APNNNPAP_ REV__ENSG00000160460|ENST00000598249|SPTBN4;REV__nc|ENSG00000160460|Q9H254-2|SPTBN4;REV__nc|ENSG00000160460|Q9H254-4|SPTBN4 5.760428011301431 0.7893668129297577 4 [DV]{I|L} 3 -1 26.461 0.0 0.0 3.3352 0.0 0.0 0.0 463.1679434954152 463.1679434954152 13.36192836689687 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [DV]{I|L} 3.3352 - 94 1 1.146 100017.3 1.0 11767 4983 16742 HBL1_DMSO_200M_050219_2,16752 HBL1_DMSO_200M_050219_2,16752,APNNNPAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16753 88.557 193.0 330800.0 25 0 42146.0 + 3718 DAFQLAVNV 9 98 488.75914603151625 975.5037391298324 2 488.7590209841728 MULTI CID FTMS 0 0 0 16742 219954.53125 0.9893950489236804 1 -0.09881591796875 11 Unmodified _DAFQLAVNV_ ENSG00000048028|ENST00000696973|USP28;ENST00000540438.5_1_11:113691037-113702685:-|nuORF;nc|ENSG00000048028|Q96RU2-2|USP28;nc|ENSG00000048028|Q96RU2-3|USP28;nc|ENSG00000048028|Q96RU2|USP28 39.94969957227396 0.0757326808254658 4 {[DA]|[EG]}{M(Oxidation (M))|F}Q{I|L}A 6 3 41.005 0.0 0.0 4.2034 0.0 0.0 0.0 327.1680335446376 327.1680335446376 19.590153894181555 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.3807196863200844 0.0 + {[DA]|[EG]}{M(Oxidation (M))|F}Q{I|L}A 4.2034 + + 572 1 1.146 54231.5 1.0 11768 4983 16742 HBL1_DMSO_200M_050219_2,16753 HBL1_DMSO_200M_050219_2,16753,DAFQLAVNV True True DAFQLAVNV 88.556924 488.759020984173 7814560.5 16742.0 nc|ENSG00000048028|Q96RU2-2|USP28;;nc|ENSG00000048028|Q96RU2-3|USP28;;ENSG00000048028|ENST00000696973|USP28;;nc|ENSG00000048028|Q96RU2|USP28;;ENST00000540438.5_1_11:113691037-113702685:-|nuORF 6.287401994069417 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16754 88.561 198.0 429570.0 25 0 41668.0 + 21080 LPAGILPMV 9 97 463.7723263658629 925.5300997985258 2 463.7729980349541 MULTI CID FTMS 0 0 0 16742 206571.5 0.9478270470236516 2 -0.2088699340820312 12 Oxidation (M) _LPAGILPM(Oxidation (M))V_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 45.7499826716795 0.0496882803020414 4 [{I|L}P]Q{I|L}{I|L}P{M(Oxidation (M))|F}V 8 2 + 49.165 0.0 0.0 5.3121 5.3121 77.021 0.0 0.0 0.0 7.993405494535821 2.491800965589789 2.491800965589789 4.313637641589871 0 0.9322333069283656 1.5228787452803376 0.0 0.0 [{I|L}P]Q{I|L}{I|L}P{M(Oxidation (M))|F}V;[{I|L}P]AG{I|L}{I|L}P{M(Oxidation (M))|F}V;[{I|L}A]PG{I|L}{I|L}P{M(Oxidation (M))|F}V;[{I|L}A]GP{I|L}{I|L}P{M(Oxidation (M))|F}V;[QP]{I|L}{I|L}{I|L}P{M(Oxidation (M))|F}V;[Q{I|L}]P{I|L}{I|L}P{M(Oxidation (M))|F}V;[PA]G{I|L}{I|L}{I|L}P{M(Oxidation (M))|F}V;[PA]{I|L}G{I|L}{I|L}P{M(Oxidation (M))|F}V;[{I|L}P]Q{I|L}[QA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]AG{I|L}[QA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.3121;4.8461;4.4485;4.4109;3.2368;3.1136;2.7331;2.6476;2.279;1.8129 -;+;-;-;-;-;-;-;-;- + 237 1 1.146 69888.9 1.0 11769 4983 16742 HBL1_DMSO_200M_050219_2,16754 HBL1_DMSO_200M_050219_2,16754,LPAGILPMV True False LPAGILPMV 88.56071 463.772998034954 8994844.25 16742.0 nc|ENSG00000124214|O95793-2|STAU1;;nc|ENSG00000124214|O95793-3|STAU1;;ENSG00000124214|ENST00000371856|STAU1 4.673670530319214 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16755 88.565 213.0 822250.0 25 0 59023.0 9198 FGGVLILIHR 10 120 562.8500631029701 1123.6855732727402 2 562.8511840701103 MULTI CID FTMS 0 0 0 16742 203365.40625 0.0240197621839827 -3 0.3787612915039062 13 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 4 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 114.69 0.0 0.0 10.207 10.207 91.919 0.0 0.0 0.0 36.47817481888637 7.7815125038364386 7.7815125038364386 7.7815125038364386 0 1.385151878060192 2.0 0.0 1.3494850021680094 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}RH;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}RH;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}[RH]{I|L};{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}[RH]{I|L} 10.207;9.5142;9.3872;8.6947;8.1039;7.2844 -;-;-;-;-;- 686 + 1 1.146 136172.0 1.0 11770 4983 16742 HBL1_DMSO_200M_050219_2,16755 HBL1_DMSO_200M_050219_2,16755,FGGVLILIHR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16756 88.568 181.0 574150.0 25 0 47626.0 + 21346 LPFFPNQHI 9 127 556.7989366603687 1111.5833203875372 2 556.7997314333916 MULTI CID FTMS 0 0 0 16742 213860.328125 0.8642619701675298 -1 0.1330108642578125 14 Unmodified _LPFFPNQHI_ ENSG00000162437|ENST00000294428|RAVER2;nc|ENSG00000162437|Q9HCJ3-2|RAVER2 50.855029805455786 0.0384952370514206 4 {I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[CP]|[EA]}Y{I|L} 9 4 + 64.646 0.0 0.0 5.8156 5.8156 74.293 0.0 0.0 0.0 49.72412334670577 7.4472749489669425 7.4472749489669425 1.6988182484533922 0 0.9247425010840048 1.5228787452803376 0.5 0.0 {I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[CP]|[EA]}Y{I|L};{I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}[NP]QH{I|L};{I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}[NP]GAH{I|L};{I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}[NP][HA]G{I|L};{I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}[NP][HA]AV;{I|L}P{M(Oxidation (M))|F}[QA]{[WT]|[RM]}H{I|L};{I|L}P{M(Oxidation (M))|F}[QA]{[ES]|[DT]|[{I|L}C]}AH{I|L};{I|L}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}[NP][HV]AA;{M(Oxidation (M))|F}P{I|L}{M(Oxidation (M))|F}{I|L}{[CP]|[EA]}Y{I|L};{M(Oxidation (M))|F}P{I|L}{M(Oxidation (M))|F}[NP]QH{I|L} 5.8156;5.6628;5.5504;4.5636;4.0472;3.8033;3.6909;3.0232;3.0015;2.8487 -;+;-;-;-;-;-;-;-;- + 710 + 1 1.146 83749.4 1.0 11771 4983 16742 HBL1_DMSO_200M_050219_2,16756 HBL1_DMSO_200M_050219_2,16756,LPFFPNQHI True True LPFFPNQHI 88.568268 556.799731433392 2417013.0 16742.0 ENSG00000162437|ENST00000294428|RAVER2;;nc|ENSG00000162437|Q9HCJ3-2|RAVER2 5.566227436065674 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16757 88.571 139.0 417790.0 25 0 52311.0 + 15390 IPPDLFARM 9 74 530.2870011069097 0 530.2867919802666 PEAK CID FTMS 0 0 0 16742 193140.78125 0.4412508883196726 -3 0.3787612915039062 15 Unmodified _IPPDLFARM_ ENSG00000187735|ENST00000521604|TCEA1;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;nc|ENSG00000187735|P23193-2|TCEA1 22.736283301280096 0.1762661025464585 4 PPD{I|L} 4 5 24.68 0.0 0.0 2.3315 0.0 0.0 113.08491844334397 520.2366427057249 633.3215611490689 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + PPD{I|L} 2.3315 + + 35 + 1 1.146 56669.3 1.0 11772 4983 16742 HBL1_DMSO_200M_050219_2,16757 HBL1_DMSO_200M_050219_2,16757,IPPDLFARM False True IPPDLFARM 88.571087 530.286791980267 14882201.0 16742.0 nc|ENSG00000187735|P23193-2|TCEA1;;ENSG00000187735|ENST00000521604|TCEA1;;ENST00000521086.6_1_8:54891227-54912595:-|nuORF 1.94946896036466 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16758 88.575 194.0 444810.0 25 0 53186.0 + 21360 LPFMATENI 9 116 518.2613559031479 1034.5081588730957 2 518.2631713747978 MULTI CID FTMS 0 0 0 16742 181561.75 0.7627443655637483 -1 0.1330108642578125 16 Unmodified _LPFMATENI_ ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL 46.92087301778293 0.0471210510596396 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MA{I|L}TEN{I|L} 9 2 + 35.46 0.0 0.0 3.4277 3.4277 65.565 0.0 0.0 0.0 3.0304657718131907 3.4801371741293323 3.0304657718131907 1.7609125905568137 0 0.5994850021680094 0.638272163982407 0.5 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MA{I|L}TEN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}ATEN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}MATEN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MAT{I|L}EN{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}TEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ATEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}EN{I|L};[{I|L}P]{M(Oxidation (M))|F}MATEN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MA{I|L}Y{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}M{I|L}AY{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3.4277;3.2575;3.2575;3.1626;3.1347;2.9645;2.8697;2.7784;2.4974;2.3271 -;-;-;-;-;-;-;+;-;- + 928 1 1.146 69161.5 1.0 11773 4983 16742 HBL1_DMSO_200M_050219_2,16758 HBL1_DMSO_200M_050219_2,16758,LPFMATENI True True LPFMATENI 88.574812 518.263171374798 2085244.25 16742.0 nc|ENSG00000239900|P30566-2|ADSL;;ENSG00000239900|ENST00000623063|ADSL 3.3786985874176025 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16759 88.589 800.0 254770.0 25 0 14554.0 -1 0 130 740.6944844260624 2219.061623878388 3 741.3645507693291 MULTI CID FTMS 0 0 0 16742 152540.203125 0.7489298342570258 -1 0.1330108642578125 17 4 {I|L}{I|L}GN{I|L}{I|L}V 7 -1 42.044 0.0 0.0 1.8947 0.0 0.0 0.0 1493.571730650125 1493.571730650125 16.98206988169865 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 1.1989700043360187 {I|L}{I|L}GN{I|L}{I|L}V 1.8947 - 2614 1 1.146 149106.7 0.6700000166893005 11774 4983 16742 HBL1_DMSO_200M_050219_2,16759 HBL1_DMSO_200M_050219_2,16759, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16760 88.604 800.0 83378.0 25 0 7941.2 -1 0 87 981.9499204648864 1961.8852879965727 2 981.951220691204 MULTI CID FTMS 0 0 0 16742 110962.5 0.7462709309418812 2 -0.2088699340820312 18 4 {[QV]|[N{I|L}]|[RA]|[KV]}E{M(Oxidation (M))|F}T{I|L} 6 -1 29.997 0.0 0.0 1.529 0.0 0.0 0.0 1241.5331511159666 1241.5331511159666 12.377203139966326 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}E{M(Oxidation (M))|F}T{I|L} 1.529 - 606 1 1.146 51686.2 0.5899999737739563 11775 4983 16742 HBL1_DMSO_200M_050219_2,16760 HBL1_DMSO_200M_050219_2,16760, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16761 88.611 403.0 425240.0 25 0 96259.0 + 30694 RFQDLIREL 9 120 595.3377155518887 1188.6608781705772 2 595.3386108279228 MULTI CID FTMS 0 0 0 16742 108779.6875 0.3382458885675134 -1 0.1330108642578125 19 Unmodified _RFQDLIREL_ ENSG00000198265|ENST00000358691|HELZ 51.487983226225225 0.0371074584807926 4 {I|L}{M(Oxidation (M))|F}R{I|L}{I|L}{M(Oxidation (M))|F}QGE 9 7 64.562 0.0 0.0 5.4315 0.0 0.0 0.0 82.06689630679921 82.06689630679921 42.8353294500305 0.0 0.0 0.0 0 1.1505149978319906 0.0 0.535666875892183 1.4291746928241125 {I|L}{M(Oxidation (M))|F}R{I|L}{I|L}{M(Oxidation (M))|F}QGE 5.4315 - 530 + 1 1.146 131930.8 1.0 11776 4983 16742 HBL1_DMSO_200M_050219_2,16761 HBL1_DMSO_200M_050219_2,16761,RFQDLIREL True True RFQDLIREL 88.610903 595.338610827923 2742821.5 16742.0 ENSG00000198265|ENST00000358691|HELZ 6.390303611755371 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16762 88.625 800.0 220660.0 25 0 28285.0 + + 16352 KIPVEADFLYA 11 113 633.3422118344864 1264.6698707357727 2 633.3436157107353 MULTI CID FTMS 0 0 0 16742 101225.7265625 0.5290409413372577 -1 0.1330108642578125 20 Unmodified _IYNEGPIILAY_ ENSG00000164305|ENST00000308394|CASP3 29.081581746732265 0.4093582134107448 4 [VP]EAD{M(Oxidation (M))|F}{I|L}K{I|L}YA 11 -1 + 69.201 0.0 0.0 5.4718 5.4718 78.199 0.0 0.0 0.0 16.228152129185816 54.050215567012565 16.228152129185816 4.771212547196612 0 0.5682503180159344 0.8860566476931632 1.0356668758921828 0.7302046884880937 [VP]EAD{M(Oxidation (M))|F}{I|L}K{I|L}YA;[VP]EAD{I|L}{M(Oxidation (M))|F}K{I|L}YA;[VP]EAD{I|L}K{M(Oxidation (M))|F}{I|L}YA;[VP]E[W{M(Oxidation (M))|F}]{I|L}K{I|L}YA;[VP]E[W{I|L}]{M(Oxidation (M))|F}K{I|L}YA;[VP]E[W{I|L}]K{M(Oxidation (M))|F}{I|L}YA;[VP]EA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}R{I|L}YA;[VP]YS[DP]{I|L}K{I|L}YA;[RP]EE{M(Oxidation (M))|F}{I|L}K{I|L}YA;[VP]YSE[VP]K{I|L}YA 5.4718;5.0946;4.8565;4.5112;4.1339;3.8959;3.6084;3.417;3.3923;3.3182 -;-;-;-;-;-;-;-;-;- 724 1 1.146 137533.7 0.6100000143051147 11777 4983 16742 HBL1_DMSO_200M_050219_2,16762 HBL1_DMSO_200M_050219_2,16762,IYNEGPIILAY False False KIPVEADFLYA 88.624739 633.343615710735 2285837.0 16742.0 ENSG00000164305|ENST00000308394|CASP3 1.5583195686340332 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16764 88.629 9.8 8646500.0 25 0 652640.0 + 15085 IMLEALERV 9 82 537.3041185625092 1072.5936841918185 2 537.3029052615166 MULTI CID FTMS 0 0 0 16763 1852095.5 0.5148507819344784 1 -0.1100540161132812 1 Unmodified _IMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 34.93206674587334 0.1032771302489716 4 {I|L}M{I|L}EA{I|L}RD{I|L} 9 3 + 82.573 0.0 0.0 7.6984 7.6984 86.302 0.0 0.0 0.0 32.92674056792244 4.9434157707161575 4.9434157707161575 4.9434157707161575 0 1.0924778212679485 2.0 0.3054621874040891 0.0 {I|L}M{I|L}EA{I|L}RD{I|L};{I|L}M{I|L}EA{I|L}E[RV];{I|L}M{I|L}V[DV]RD{I|L};{I|L}M{I|L}EV[DV][RV];{I|L}MV[DV]{I|L}RD{I|L};{I|L}M{I|L}V[DV]E[RV];{I|L}MV[DV]{I|L}E[RV];{I|L}M{I|L}VE[DV][RV];{I|L}MV{I|L}[DV]RD{I|L};{I|L}MV{I|L}[DV]E[RV] 7.6984;7.2376;5.6696;5.3252;5.2695;5.2088;4.8086;4.7639;4.7082;4.2473 -;+;-;-;-;-;-;-;-;- + 513 + 1 1.153 70921.6 1.0 11778 4984 16763 HBL1_DMSO_200M_050219_2,16764 HBL1_DMSO_200M_050219_2,16764,IMLEALERV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16765 88.631 15.0 3612700.0 25 0 425710.0 + 134 AALEEADKMFL 11 75 619.3100332987357 1236.6055136642713 2 619.3107787966728 MULTI CID FTMS 0 0 0 16763 3771959.0 1.0 0 0.0 2 Unmodified _AALEEADKMFL_ ENSG00000255302|ENST00000530028|EID1;nc|ENSG00000255302|Q9Y6B2-2|EID1 89.60864043982822 0.000670653681945 4 AA{I|L}EEADKM{M(Oxidation (M))|F}{I|L} 11 0 + 85.747 0.0 0.0 6.9341 6.9341 87.271 0.0 0.0 0.0 7.971284052836538 16.575773191777927 7.971284052836538 7.971284052836538 0 3.504432191740108 1.154901959985743 0.3807196863200844 0.0 + + AA{I|L}EEADKM{M(Oxidation (M))|F}{I|L};[{I|L}A]AEEADKM{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}AAEADKM{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}AAEWKM{M(Oxidation (M))|F}{I|L};AATAME[RP]M{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}EAAADKM{M(Oxidation (M))|F}{I|L};AA{I|L}E[CS][RP]M{M(Oxidation (M))|F}{I|L};AATAEM[RP]M{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}EAAWKM{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}E{[NV]|[RG]}DKM{M(Oxidation (M))|F}{I|L} 6.9341;6.2895;6.1445;5.8377;5.5675;5.4968;5.3859;5.3241;5.1899;5.0475 +;-;-;-;-;-;-;-;-;- + 2332 1 1.153 43815.7 1.0 11779 4984 16763 HBL1_DMSO_200M_050219_2,16765 HBL1_DMSO_200M_050219_2,16765,AALEEADKMFL True True AALEEADKMFL 88.630651 619.310778796673 65427512.0 16763.0 ENSG00000255302|ENST00000530028|EID1;;nc|ENSG00000255302|Q9Y6B2-2|EID1 7.347198645273845 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16766 88.632 16.0 3731800.0 25 0 494780.0 + 21494 LPHVPLGVI 9 76 472.7997630750537 943.5849732169072 2 472.8000671267509 MULTI CID FTMS 0 0 0 16763 3806233.0 1.0 0 0.0 3 Unmodified _LPHVPLGVI_ ENSG00000115307|ENST00000377526|AUP1;ENST00000462297.1_1_2:74754523-74754670:-|nuORF;ENST00000463900.5_1_2:74753929-74756164:-|nuORF;ENST00000466894.5_1_2:74754206-74756164:-|nuORF;ENST00000486234.1_1_2:74754275-74754965:-|nuORF;nc|ENSG00000115307|Q9Y679-3|AUP1 56.04830969593885 0.0282699710924866 4 [{I|L}P]HVGP{I|L}V{I|L} 9 2 + 68.689 0.0 0.0 7.2796 7.2796 82.151 0.0 0.0 0.0 3.0102999566398125 16.478174818886373 3.0102999566398125 3.0102999566398125 0 0.805462187404089 1.3010299956639813 0.0 0.0 [{I|L}P]HVGP{I|L}V{I|L};[HV]P{I|L}GP{I|L}V{I|L};[{I|L}P]HVPG{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}GP{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VGP{I|L}V{I|L};[{I|L}P]HVGPV{I|L}{I|L};[HV]P{I|L}PG{I|L}V{I|L};[{I|L}P]HVGVP{I|L}{I|L};[HV]P{I|L}GPV{I|L}{I|L};[{I|L}P]HVPAVV{I|L} 7.2796;6.9606;6.6416;6.6416;6.6285;6.5571;6.3225;6.2381;6.2381;6.1359 -;-;-;-;-;-;-;-;-;- 631 1 1.153 53816.7 1.0 11780 4984 16763 HBL1_DMSO_200M_050219_2,16766 HBL1_DMSO_200M_050219_2,16766,LPHVPLGVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16767 88.633 58.0 1611400.0 25 0 194020.0 + 2344 AQLELISRL 9 93 521.8159418470095 1041.617330760819 2 521.8165771365166 MULTI CID FTMS 0 0 0 16763 1316715.75 0.6736617866379476 1 -0.1100540161132812 4 Unmodified _AQLELISRL_ ENSG00000167258|ENST00000447079|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;nc|ENSG00000167258|Q9NYV4-3|CDK12 65.47368725323818 0.0230515101691092 4 [QA]{I|L}E{I|L}{I|L}SR{I|L} 9 0 + 78.157 0.0 0.0 7.5034 7.5034 82.765 0.0 0.0 0.0 51.87061327352937 13.019999084654556 13.019999084654556 3.0102999566398125 0 1.6989700043360187 1.154901959985743 0.4247425010840047 0.5941876774005248 + + [QA]{I|L}E{I|L}{I|L}SR{I|L};[QA]{I|L}{I|L}E{I|L}SR{I|L};[{I|L}T][KQ]Q{I|L}S[KP] 7.5034;7.2144;0.07649 +;-;- + 145 + 1 1.153 76943.1 1.0 11781 4984 16763 HBL1_DMSO_200M_050219_2,16767 HBL1_DMSO_200M_050219_2,16767,AQLELISRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16768 88.634 35.0 1873800.0 25 0 303790.0 + 8891 FAFESDLHSL 10 92 583.2799737500374 1164.5453945668746 2 583.2802612185478 MULTI CID FTMS 0 0 0 16763 957440.75 1.0 0 0.0 5 Unmodified _FAFESDLHSL_ ENSG00000117399|ENST00000310955|CDC20;ENST00000488829.1_1_9:89626569-89628063:+|nuORF 78.14939416004806 0.0185844602684931 4 A{I|L}DSE{M(Oxidation (M))|F}AE 8 8 72.728 0.0 0.0 6.2452 0.0 0.0 284.1491871564469 0.0 284.1491871564469 0.0 26.67857846967344 0.0 0.0 0 0.805462187404089 0.0 1.2302046884880935 0.0 A{I|L}DSE{M(Oxidation (M))|F}AE 6.2452 - 1120 1 1.153 51853.3 1.0 11782 4984 16763 HBL1_DMSO_200M_050219_2,16768 HBL1_DMSO_200M_050219_2,16768,FAFESDLHSL True True FAFESDLHSL 88.63449 583.280261218548 7533448.5 16763.0 ENST00000488829.1_1_9:89626569-89628063:+|nuORF;;ENSG00000117399|ENST00000310955|CDC20 7.318534215291341 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16769 88.636 58.0 987950.0 25 0 89626.0 + 8903 FAFRYVTTI 9 85 559.3052814346896 1116.5960099361791 2 559.3058959841728 MULTI CID FTMS 0 0 0 16763 671234.3125 0.1166671019153753 -2 0.2318267822265625 6 Unmodified _FAFRYVTTI_ ENSG00000187325|ENST00000341864|TAF9B;ENSG00000273841|ENST00000217893|TAF9;ENST00000480681.1_1_X:77393446-77395117:-|nuORF;ENST00000587506.1_1_19:30528395-30528668:+|nuORF 63.960520009940105 0.0238892913700936 4 [PS]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[SG]VTT{I|L} 11 6 + 45.512 0.0 0.0 4.076 4.076 71.004 0.0 0.0 0.0 1.2854052584459552 20.160040020230632 1.2854052584459552 3.5654732351381213 0 0.8807196863200843 0.7958800173440752 0.8252574989159953 0.3494850021680094 [PS]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[SG]VTT{I|L};[PS]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[KS]ET{I|L};[PS]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{[QD]|[EN]|[WG]|[KD]|[RS]}TT{I|L};[PS]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[KS]TE{I|L};[PS]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[KS]T{I|L}E 4.076;3.7567;3.4871;2.7492;1.6462 -;-;-;-;- 238 1 1.153 52094.0 1.0 11783 4984 16763 HBL1_DMSO_200M_050219_2,16769 HBL1_DMSO_200M_050219_2,16769,FAFRYVTTI True True FAFRYVTTI 88.635972 559.305895984173 89353480.0 16763.0 ENSG00000187325|ENST00000341864|TAF9B;;ENST00000480681.1_1_X:77393446-77395117:-|nuORF;;ENST00000587506.1_1_19:30528395-30528668:+|nuORF;;ENSG00000273841|ENST00000217893|TAF9 8.478351751963297 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16770 88.641 270.0 497020.0 25 0 26579.0 + -1 EIISSLPSI 9 120 958.9593834262616 1915.904213919323 2 959.4631225466728 MULTI CID FTMS 0 0 0 16763 330501.09375 0.4990211178281404 3 -0.3330230712890625 7 ENSG00000080608|ENST00000397885|PUM3 4 {[QV]|[N{I|L}]|[RA]|[KV]}[DG]V{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 91.223 0.0 0.0 4.7614 4.7614 51.53 0.0 0.0 0.0 6.020599913279625 7.695290822657185 6.020599913279625 0.0 0 0.9177353201839438 1.5228787452803376 0.9436726795685342 1.860924374808178 {[QV]|[N{I|L}]|[RA]|[KV]}[DG]V{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[DG]V{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YKV{I|L};[PS]QSV{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L};[PS]QSV{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RD]{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RD]{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YKV{I|L};{[QS]|[NT]}PSV{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L};{[QS]|[NT]}PSV{I|L}[YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RD][YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RD][YC(Carbamidomethyl (C))]QNA{M(Oxidation (M))|F}YKV{I|L} 4.7614;4.7614;4.4471;4.4471;4.4176;4.4176;4.3313;4.3313;4.1662;4.1662 -;-;-;-;-;-;-;-;-;- 3362 1 1.153 94792.3 1.0 11784 4984 16763 HBL1_DMSO_200M_050219_2,16770 HBL1_DMSO_200M_050219_2,16770, False False EIISSLPSI 88.641007 958.9621 6557981.5 16763.0 ENSG00000080608|ENST00000397885|PUM3 0.679863969484965 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16771 88.645 186.0 188870.0 25 0 18780.0 + 16784 KGIDYDFPSL 10 62 577.789891335107 1153.565229737014 2 577.7905761599541 MULTI CID FTMS 0 0 0 16763 312027.84375 0.6056611893714248 -2 0.2318267822265625 8 Unmodified _KGIDYDFPSL_ ENSG00000155438|ENST00000285814|NIFK;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 35.079672537005266 0.2095246155385646 4 [PS]TKYD{M(Oxidation (M))|F}PS{I|L} 10 4 + 73.606 0.0 0.0 6.3807 6.3807 85.52 0.0 0.0 0.0 8.45098040014257 20.585908507588755 8.45098040014257 8.45098040014257 0 1.242992819099939 1.0 1.2302046884880935 0.0 [PS]TKYD{M(Oxidation (M))|F}PS{I|L};[VG]EKYD{M(Oxidation (M))|F}PS{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}YD{M(Oxidation (M))|F}PS{I|L};[PS]TK{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}PS{I|L};[VG]EK{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}PS{I|L};[PS]TKY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DP]{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}YDE{[DS]|[MA]|[CV]|TT}{I|L};[PS]TK{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}[DP]{I|L};[VG]EKY{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DP]{I|L};[VG]EK{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}[DP]{I|L} 6.3807;5.6481;4.6973;4.2344;3.5018;3.3477;3.2443;2.9341;2.6151;2.2015 -;-;-;-;-;-;-;-;-;- 140 1 1.153 35063.7 1.0 11785 4984 16763 HBL1_DMSO_200M_050219_2,16771 HBL1_DMSO_200M_050219_2,16771,KGIDYDFPSL False True KGIDYDFPSL 88.644603 577.790576159954 9695878.0 16763.0 ENSG00000155438|ENST00000285814|NIFK;;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 5.83322016398112 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16772 88.647 106.0 679100.0 25 0 104550.0 + -1 YALYCQSI 8 122 509.2402601531311 1016.4659673730622 2 509.2400695681572 MULTI CID FTMS 0 0 0 16763 282474.21875 0.1781832644939097 4 -0.4388580322265625 9 Carbamidomethyl (C) _YALYC(Carbamidomethyl (C))QSI_ REV__ENSG00000138182|ENST00000371728|KIF20B;REV__nc|ENSG00000138182|Q96Q89-2|KIF20B;REV__nc|ENSG00000138182|Q96Q89-3|KIF20B;REV__nc|ENSG00000138182|Q96Q89-4|KIF20B 10.183394434864962 0.7604730176254005 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 3 -1 19.41 0.0 0.0 1.9096 0.0 0.0 0.0 666.3340548150999 666.3340548150999 5.337119661928064 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 1.9096 + + 256 + 1 1.153 59743.1 1.0 11786 4984 16763 HBL1_DMSO_200M_050219_2,16772 HBL1_DMSO_200M_050219_2,16772,YALYCQSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16773 88.648 19.0 1095700.0 25 0 84363.0 + 39939 VFYIGNEDD 9 49 536.2367298745941 1070.458906815988 2 536.2379638552666 MULTI CID FTMS 0 0 0 16763 246117.65625 0.5732411685035775 -1 0.09881591796875 10 Unmodified _VFYIGNEDD_ REV__ENST00000332180.9_1_12:105527580-105527613:+|nuORF 5.230669730166228 0.7320841359114558 4 M{I|L}E 3 -1 13.188 0.0 0.0 1.232 0.0 0.0 110.94878826305678 583.3238619440061 694.272650207063 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M{I|L}E 1.232 - 14 + 1 1.153 23014.1 1.0 11787 4984 16763 HBL1_DMSO_200M_050219_2,16773 HBL1_DMSO_200M_050219_2,16773,VFYIGNEDD False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16774 88.655 374.0 433190.0 25 0 54020.0 + 12567 GVIDKVLLV 9 135 478.3131373176547 954.6117217021094 2 478.3135253787041 MULTI CID FTMS 0 0 0 16763 236265.21875 0.8479616360208845 -1 0.09881591796875 11 Unmodified _GVIDKVLLV_ ENSG00000136643|ENST00000366960|RPS6KC1;nc|ENSG00000136643|Q96S38-2|RPS6KC1 53.832793166522166 0.0319663582346103 4 [VG]{I|L}SV{I|L}GV{I|L}V 10 4 + 65.268 0.0 0.0 6.8371 6.8371 79.617 0.0 0.0 0.0 14.331757371527878 6.6896155137222095 6.6896155137222095 2.38560627359832 0 1.4177353201839438 1.6989700043360187 0.9698565171985376 0.0 [VG]{I|L}SV{I|L}GV{I|L}V;[VG]S{I|L}V{I|L}GV{I|L}V;[VG]{I|L}SV{I|L}VG{I|L}V;[VG]SV{I|L}{I|L}GV{I|L}V;[VG]S{I|L}V{I|L}VG{I|L}V;[VG]{I|L}VS{I|L}GV{I|L}V;[VG]SV{I|L}{I|L}VG{I|L}V;[VG]{I|L}SVGV{I|L}{I|L}V;[VG]S{I|L}VGV{I|L}{I|L}V;[VG]{I|L}S{I|L}VGV{I|L}V 6.8371;6.5872;6.4517;6.3233;6.2017;5.9554;5.9378;5.9256;5.6757;5.5857 -;-;-;-;-;-;-;-;-;- 3987 1 1.153 129168.5 1.0 11788 4984 16763 HBL1_DMSO_200M_050219_2,16774 HBL1_DMSO_200M_050219_2,16774,GVIDKVLLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16775 88.663 486.0 196340.0 25 0 31494.0 + 38315 TQINVGNLEL 10 112 550.7999402648474 1099.5853275964946 2 550.8004028201103 MULTI CID FTMS 0 0 0 16763 221616.625 1.0 0 0.0 12 Unmodified _TQINVGNLEL_ ENSG00000100201|ENST00000403230|DDX17;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 40.23920728925047 0.1550410903091231 4 [Q{I|L}]TNVGN[QA]R 10 5 + 50.588 0.0 0.0 4.6006 4.6006 67.867 0.0 0.0 0.0 0.9074892301614028 2.218487496163561 0.9074892301614028 0.9074892301614028 0 0.0 0.585026652029182 0.2887254899964357 1.1215624624795442 [Q{I|L}]TNVGN[QA]R;[QT]{I|L}NVGN[QA]R;[Q{I|L}]TNVGNV[KQ];[QT]{I|L}NVGNV[KQ];{[QN]|[E{I|L}]|[KN]}[DV]VGN[QA]R;[Q{I|L}]TNV[WP]SR;{[QN]|[E{I|L}]|[KN]}[DV]VGNV[KQ];[{I|L}T]QNVGN[QA]R;[QT]{I|L}NV[WP]SR;[Q{I|L}]TGGVGN[QA]R 4.6006;4.5181;4.3989;4.3164;4.1102;3.9453;3.9085;3.8657;3.8628;3.7672 -;-;-;-;-;-;-;-;-;- 3345 1 1.153 75492.7 1.0 11789 4984 16763 HBL1_DMSO_200M_050219_2,16775 HBL1_DMSO_200M_050219_2,16775,TQINVGNLEL False True TQINVGNLEL 88.66334 550.80040282011 2195860.0 16763.0 ENST00000432525.5_1_22:38886367-38903636:-|nuORF;;nc|ENSG00000100201|Q92841-1|DDX17;;ENST00000497196.5_1_22:38889517-38891019:-|nuORF;;ENSG00000100201|ENST00000403230|DDX17;;nc|ENSG00000100201|Q92841-3|DDX17;;ENST00000477112.1_1_22:38890609-38891019:-|nuORF;;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;;nc|ENSG00000100201|Q92841-2|DDX17 3.7861512502034502 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16776 88.669 336.0 444490.0 25 0 44711.0 + + 31401 SLLMSIHNI 9 140 514.2533247408359 1026.4920965484716 2 514.2535888552666 MULTI CID FTMS 0 0 0 16763 179671.25 1.0 0 0.0 13 Unmodified _RPELSGTMH_ nc|ENSG00000143398|Q99755-2|PIP5K1A;nc|ENSG00000143398|Q99755-3|PIP5K1A;nc|ENSG00000143398|Q99755-4|PIP5K1A;ENSG00000143398|ENST00000368888|PIP5K1A;nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000480546.1_1_10:95718567-95721153:-|nuORF 27.628801355627647 0.1796483985696185 4 [EP]R{I|L}SM{I|L} 7 -1 54.513 0.0 0.0 5.3106 0.0 0.0 0.0 197.03125352204304 197.03125352204304 13.834172022634377 0.0 0.0 0.0 0 0.75 1.3979400086720375 0.3807196863200844 0.5994850021680094 [EP]R{I|L}SM{I|L} 5.3106 - 2362 1 1.153 121881.0 1.0 11790 4984 16763 HBL1_DMSO_200M_050219_2,16776 HBL1_DMSO_200M_050219_2,16776,RPELSGTMH False False SLLMSIHNI 88.669443 514.253588855267 9258136.0 16763.0 nc|ENSG00000143398|Q99755-2|PIP5K1A;;nc|ENSG00000143398|Q99755-3|PIP5K1A;;nc|ENSG00000143398|Q99755-4|PIP5K1A;;ENSG00000143398|ENST00000368888|PIP5K1A;;nc|ENSG00000180764|A2A3N6|PIPSL;;ENST00000480546.1_1_10:95718567-95721153:-|nuORF 5.789552529652913 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16777 88.683 800.0 226690.0 25 0 18621.0 + 12701 GVLQDKDLFSV 11 168 610.8284454606855 1219.642337988171 2 610.8292114138603 MULTI CID FTMS 0 0 0 16763 157880.515625 0.6495238598471101 -1 0.09881591796875 14 Unmodified _GVLQDKDLFSV_ ENSG00000138629|ENST00000395081|UBL7 107.5634045930896 0.009905022604853 4 [VG]{I|L}QSDR{I|L}{M(Oxidation (M))|F}W 10 5 + 74.451 0.0 0.0 6.1044 6.1044 81.301 0.0 0.0 0.0 5.085361982957551 5.085361982957551 5.085361982957551 5.085361982957551 0 1.9124379954164592 1.5228787452803376 0.9802046884880936 0.785666875892183 [VG]{I|L}QSDR{I|L}{M(Oxidation (M))|F}W;[VG]{I|L}QDDK{I|L}{M(Oxidation (M))|F}SV;[VG]{I|L}QSD{I|L}R{M(Oxidation (M))|F}W;[VG]{[CP]|[EA]}RSR{I|L}{M(Oxidation (M))|F}W;[VG]{[CP]|[EA]}KDR{I|L}{M(Oxidation (M))|F}W;[VS]NA{I|L}DR{I|L}{M(Oxidation (M))|F}W;[VG]QS{I|L}DR{I|L}{M(Oxidation (M))|F}W;[VG]{I|L}QSD{M(Oxidation (M))|F}{I|L}RW;[VG]SD{I|L}QR{I|L}{M(Oxidation (M))|F}W;[VG]Q{I|L}DSR{I|L}{M(Oxidation (M))|F}W 6.1044;5.6874;5.4465;5.4125;5.3869;5.3718;5.3639;5.3484;5.3376;5.2086 -;-;-;-;-;-;-;-;-;- 16358 1 1.153 135217.6 0.7400000095367432 11791 4984 16763 HBL1_DMSO_200M_050219_2,16777 HBL1_DMSO_200M_050219_2,16777,GVLQDKDLFSV True True GVLQDKDLFSV 88.68328 610.82921141386 2075584.25 16763.0 ENSG00000138629|ENST00000395081|UBL7 7.430788516998291 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16778 88.692 491.0 176090.0 25 0 22234.0 -1 VLNQESMTL 9 139 525.7607072338959 1049.5068615345915 2 525.7607910037041 MULTI CID FTMS 0 0 0 16763 141571.140625 1.0 0 0.0 15 Oxidation (M) _VLNQESM(Oxidation (M))TL_ ENSG00000163840|ENST00000296161|DTX3L 21.74664581756881 0.2544899275067181 4 VNV 3 -1 52.369 0.0 0.0 4.9899 0.0 0.0 0.0 734.3030818875379 734.3030818875379 38.38979020355792 0.0 0.0 0.0 0 0.1923877696554315 2.0 0.0 0.4247425010840047 VNV 4.9899 - 649 + 1 1.153 73969.8 1.0 11792 4984 16763 HBL1_DMSO_200M_050219_2,16778 HBL1_DMSO_200M_050219_2,16778,VLNQESMTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16779 88.706 800.0 158630.0 25 0 12637.0 + 1687 ALPELYFQKV 10 126 604.340287380377 1206.666021827554 2 604.3410522341728 MULTI CID FTMS 0 0 0 16763 132498.703125 1.0 0 0.0 16 Unmodified _ALPELYFQKV_ ENSG00000065308|ENST00000182527|TRAM2 67.08073823543168 0.0190306485248484 4 [{I|L}A]PE{I|L}Y{M(Oxidation (M))|F}QKV 10 0 + 92.617 0.0 0.0 7.6755 7.6755 90.505 0.0 0.0 0.0 50.177739965467865 12.332881222565248 12.332881222565248 9.164539485499262 0 0.6989700043360187 2.0 0.3252574989159953 1.6791746928241125 + + [{I|L}A]PE{I|L}Y{M(Oxidation (M))|F}QKV;[{I|L}A]PE{I|L}Y{M(Oxidation (M))|F}[AG]KV;[{I|L}A]PE{I|L}[{I|L}P][TP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}A]P{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{[WT]|[RM]}KV;[{I|L}A]PE{I|L}[{I|L}P][MN]P{I|L};[{I|L}A]V[SG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}QKV;[{I|L}A]PE{I|L}[{I|L}P]VC(Carbamidomethyl (C))PV;[{I|L}A]PE{I|L}[{I|L}P]{[WT]|[RM]}[PA];[{I|L}A]V[YR]{[QC]|[C(Carbamidomethyl (C))A]}QKV;[{I|L}A]P{M(Oxidation (M))|F}V[K{I|L}]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7.6755;6.916;4.3458;4.1084;4.1011;3.7506;3.6978;3.6721;3.6586;3.3876 +;-;-;-;-;-;-;-;-;- + 1605 + 1 1.153 98547.7 0.6899999976158142 11793 4984 16763 HBL1_DMSO_200M_050219_2,16779 HBL1_DMSO_200M_050219_2,16779,ALPELYFQKV True True ALPELYFQKV 88.705792 604.341052234173 1245486.875 16763.0 ENSG00000065308|ENST00000182527|TRAM2 7.619095007578532 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16780 88.721 800.0 136870.0 25 0 10581.0 + 32019 RVIEELNVVL 10 136 592.3544213424602 1182.6942897517204 2 592.3549682497978 MULTI CID FTMS 0 0 0 16763 126410.546875 1.0 0 0.0 17 Unmodified _RVIEELNVVL_ ENSG00000047365|ENST00000303965|ARAP2 20.580933911654288 0.5022139299129796 4 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}NVV{I|L} 10 4 + 62.299 0.0 0.0 5.2675 5.2675 80.859 0.0 0.0 0.0 8.225722288645585 15.026975159433531 8.225722288645585 8.225722288645585 0 0.3252574989159953 1.5228787452803376 0.1421590589602531 0.0 {[QN]|[E{I|L}]|[KN]}[RV]E{I|L}NVV{I|L};[{I|L}T]V[PS]E{I|L}NVV{I|L};{[QN]|[E{I|L}]|[KN]}[RV]E{I|L}GGVV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]E{I|L}NVV{I|L};[{I|L}T]V[PS]E{I|L}GGVV{I|L};{[QN]|[E{I|L}]|[KN]}[RV]E{[NV]|[RG]}{I|L}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}T[HK]NVV{I|L};{[TV]|[{I|L}S]}{I|L}[PS]E{I|L}NVV{I|L};VV[W{I|L}]E{I|L}NVV{I|L};{[VA]|[{I|L}G]}[QA]KE{I|L}NVV{I|L} 5.2675;4.572;4.4926;3.8747;3.8002;3.6821;3.6137;3.609;3.4563;3.4209 -;-;-;-;-;-;-;-;-;- 688 1 1.153 86170.1 0.6100000143051147 11794 4984 16763 HBL1_DMSO_200M_050219_2,16780 HBL1_DMSO_200M_050219_2,16780,RVIEELNVVL False True RVIEELNVVL 88.721092 592.354968249798 2675054.5 16763.0 ENSG00000047365|ENST00000303965|ARAP2 5.4221986134847 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16781 88.735 800.0 321600.0 25 0 13566.0 + -1 MPPEPIII 8 156 909.4258970690796 1816.8372412049591 2 909.9301635622978 MULTI CID FTMS 0 0 0 16763 110944.625 0.7616713815745718 -1 0.09881591796875 18 nc|ENSG00000066117|Q96GM5-2|SMARCD1;ENSG00000066117|ENST00000394963|SMARCD1 4 [KT]EY{M(Oxidation (M))|F}ANQQAE{[ES]|[DT]|[{I|L}C]}C(Carbamidomethyl (C)){I|L} 15 -1 + 81.82 0.0 0.0 4.5035 4.5035 71.506 0.0 0.0 0.0 7.61760834195475 13.042359562158126 7.61760834195475 3.0102999566398125 0 0.7742275032520141 0.0 0.0 0.8494850021680094 [KT]EY{M(Oxidation (M))|F}ANQQAE{[ES]|[DT]|[{I|L}C]}C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQA[MD]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQAE[C(Carbamidomethyl (C))C]{I|L}{I|L};[KT]EY{M(Oxidation (M))|F}AGGQQAE{[ES]|[DT]|[{I|L}C]}C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]QAE{[ES]|[DT]|[{I|L}C]}C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]AE{[ES]|[DT]|[{I|L}C]}C(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQAE{[ES]|[DT]|[{I|L}C]}[CG]{I|L};[KT]EY{M(Oxidation (M))|F}ANQQA[MD]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQA[MD]V[CG]{I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]QA[MD]VC(Carbamidomethyl (C)){I|L} 4.5035;4.3378;4.0064;4.0064;4.0064;4.0064;4.0064;3.8726;3.8407;3.8407 -;-;-;-;-;-;-;-;-;- 9069 + 1 1.153 168594.7 0.550000011920929 11795 4984 16763 HBL1_DMSO_200M_050219_2,16781 HBL1_DMSO_200M_050219_2,16781, False False MPPEPIII 88.73494 909.930163562298 0.0 16763.0 nc|ENSG00000066117|Q96GM5-2|SMARCD1;;ENSG00000066117|ENST00000394963|SMARCD1 3.356748342514038 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16783 88.74 14.0 3478400.0 25 0 350030.0 3311 AYLAWLIYSI 10 57 606.8349128677609 1211.6552728023216 2 606.8352538943291 MULTI CID FTMS 0 0 0 16782 3412611.75 0.5830844662243685 1 -0.12225341796875 1 Unmodified _AYLAWLIYSI_ ENSG00000183307|ENST00000331437|TMEM121B 28.486842064014134 0.328649637529545 4 YTV 3 9 35.049 0.0 0.0 2.8927 0.0 0.0 830.4654057142342 0.0 830.4654057142342 0.0 4.714424218691011 0.0 0.0 0 1.0 0.0 0.8807196863200843 0.0 YTV 2.8927 - 38 + 1 1.16 44095.1 1.0 11796 4985 16782 HBL1_DMSO_200M_050219_2,16783 HBL1_DMSO_200M_050219_2,16783,AYLAWLIYSI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16784 88.741 71.0 864960.0 25 0 105350.0 + 34281 SLQSTILGV 9 77 459.2683741512179 916.522195369236 2 459.2687255740166 MULTI CID FTMS 0 0 0 16782 829895.5 0.8683393808666883 1 -0.12225341796875 2 Unmodified _SLQSTILGV_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 34.10243960390752 0.1078313939113124 4 {[TV]|[{I|L}S]}[NP]S{I|L} 6 6 28.121 0.0 0.0 3.0683 0.0 0.0 0.0 302.1710055322215 302.1710055322215 4.933787369250169 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9247425010840048 0.0 {[TV]|[{I|L}S]}[NP]S{I|L} 3.0683 - 456 1 1.16 54222.6 1.0 11797 4985 16782 HBL1_DMSO_200M_050219_2,16784 HBL1_DMSO_200M_050219_2,16784,SLQSTILGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16785 88.742 21.0 2062500.0 25 0 232750.0 + -1 LQIEDFEARI 10 46 617.3263861293351 1232.63821932547 2 617.3267700076103 MULTI CID FTMS 0 0 0 16782 2404228.25 1.0 0 0.0 3 Carbamidomethyl (C) _QLLELLHC(Carbamidomethyl (C))AH_ ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13;ENSG00000186010|ENST00000507754|NDUFA13 32.30548876998284 0.2428506522065767 4 [Q{I|L}]{I|L}ED{M(Oxidation (M))|F}E 7 -1 59.201 0.0 0.0 4.8028 0.0 0.0 0.0 355.20942762173826 355.20942762173826 49.73660722610156 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.4247425010840047 0.0 [Q{I|L}]{I|L}ED{M(Oxidation (M))|F}E 4.8028 - 96 + 1 1.16 39907.6 1.0 11798 4985 16782 HBL1_DMSO_200M_050219_2,16785 HBL1_DMSO_200M_050219_2,16785,QLLELLHCAH False False LQIEDFEARI 88.742367 617.32677000761 20500028.0 16782.0 ENST00000586674.1_1_19:19627047-19643527:+|nuORF;;nc|ENSG00000186010|Q9P0J0-2|NDUFA13;;ENSG00000186010|ENST00000507754|NDUFA13 4.727972984313965 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16786 88.744 17.0 3594900.0 25 0 391030.0 + 10575 FVILWISVP 9 62 537.3217064030063 1072.6288598728124 2 537.3210327029228 MULTI CID FTMS 0 0 0 16782 1977376.875 1.0 0 0.0 4 Unmodified _FVILWISVP_ REV__ENSG00000130234|ENST00000252519|ACE2;REV__nc|ENSG00000130234|Q9BYF1-3|ACE2 23.1484247019978 0.2366544122328345 4 V{M(Oxidation (M))|F}{I|L}{I|L} 4 -1 33.8 0.0 0.0 3.1511 0.0 0.0 0.0 597.3009127252561 597.3009127252561 10.447406013437188 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{M(Oxidation (M))|F}{I|L}{I|L} 3.1511 - 69 + 1 1.16 53613.9 1.0 11799 4985 16782 HBL1_DMSO_200M_050219_2,16786 HBL1_DMSO_200M_050219_2,16786,FVILWISVP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16787 88.746 102.0 766120.0 25 0 108630.0 + 21464 LPHLVVSI 8 98 439.2786665730287 876.5427802128573 2 439.2787048220634 MULTI CID FTMS 0 0 0 16782 564620.0625 0.5644395476771585 -1 0.1100540161132812 5 Unmodified _LPHLVVSI_ ENSG00000119285|ENST00000366582|HEATR1 45.7499826716795 0.1592378023510922 4 [H{I|L}]P{I|L}VVS{I|L} 8 2 + 69.602 0.0 0.0 7.9405 7.9405 83.744 0.0 0.0 0.0 10.036041242688256 16.40978057358332 10.036041242688256 3.0102999566398125 0 0.9247425010840048 1.2218487496163564 0.0 0.0 [H{I|L}]P{I|L}VVS{I|L};[H{I|L}]PV{I|L}VS{I|L};[H{I|L}]VP{I|L}VS{I|L};[H{I|L}]PVV{I|L}S{I|L};[H{I|L}]P{I|L}VSV{I|L};[H{I|L}]VPV{I|L}S{I|L};[H{I|L}]PV{I|L}SV{I|L};[{I|L}P]H{I|L}VVS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}VVS{I|L};[H{I|L}]VVP{I|L}S{I|L} 7.9405;7.5971;7.2537;7.2537;7.1968;6.9102;6.8534;6.7956;6.7444;6.5668 -;-;-;-;-;-;-;+;-;- + 553 1 1.16 67811.5 1.0 11800 4985 16782 HBL1_DMSO_200M_050219_2,16787 HBL1_DMSO_200M_050219_2,16787,LPHLVVSI False True LPHLVVSI 88.745727 439.278704822063 20925718.0 16782.0 ENSG00000119285|ENST00000366582|HEATR1 1.6491518020629885 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16788 88.748 120.0 438720.0 25 0 35502.0 + 4888 DGHFVPNITF 10 73 573.7824168708918 1145.5502808085837 2 573.7819702029228 MULTI CID FTMS 0 0 0 16782 435971.0 0.4698270610234546 2 -0.2229690551757812 6 Unmodified _DGHFVPNITF_ ENSG00000197713|ENST00000359429|RPE;ENSG00000235376|ENST00000441178|RPEL1;nc|ENSG00000197713|Q96AT9-4|RPE 26.268140514670165 0.3785003716575977 4 [NP]AP[NP]V[CS]T{M(Oxidation (M))|F} 11 8 [NP]A + + 34.759 5.9421 2.1061 3.0343 3.0343 45.999 0.0 0.0 0.0 0.0 21.660298737933687 0.0 0.0 0 0.8807196863200843 0.0 0.5941876774005248 0.0 [NP]AP[NP]V[CS]T{M(Oxidation (M))|F} 3.0343 - 350 + 1 1.16 48974.4 1.0 11801 4985 16782 HBL1_DMSO_200M_050219_2,16788 HBL1_DMSO_200M_050219_2,16788,DGHFVPNITF False True DGHFVPNITF 88.748219 573.781970202923 19876674.0 16782.0 nc|ENSG00000197713|Q96AT9-4|RPE;;ENSG00000197713|ENST00000359429|RPE;;ENSG00000235376|ENST00000441178|RPEL1 8.290680726369223 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16789 88.751 151.0 328330.0 25 0 52500.0 -1 ALMAAPLSL 9 77 451.75274496202985 901.4909369908596 2 451.7524902224541 MULTI CID FTMS 0 0 0 16782 369045.59375 0.0284156136094127 70 -7.128776550292969 7 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 32.116972079565 0.1225432171549407 4 [{I|L}A]{M(Oxidation (M))|F}PAS 6 -1 47.369 0.0 0.0 5.2545 0.0 0.0 0.0 312.1935074885682 312.1935074885682 24.83288122256525 0.0 0.0 0.0 0 0.5 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS 5.2545 - 172 1 1.16 42908.2 1.0 11802 4985 16782 HBL1_DMSO_200M_050219_2,16789 HBL1_DMSO_200M_050219_2,16789,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16790 88.756 230.0 433080.0 25 0 70045.0 -1 MLEPHSCQYI 10 107 647.2852836565492 1292.5560143798982 2 647.2858154177666 MULTI CID FTMS 0 0 0 16782 305226.25 0.2544286215918551 -2 0.2088699340820312 8 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LEPHSC(Carbamidomethyl (C))QYI_ ENSG00000068912|ENST00000185150|ERLEC1;nc|ENSG00000068912|Q96DZ1-2|ERLEC1;nc|ENSG00000068912|Q96DZ1-3|ERLEC1 24.020572477871973 0.4289996903560794 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))C]S{M(Oxidation (M))|F}QY{I|L} 10 -1 + 52.4 0.0 0.0 4.054 4.054 67.091 0.0 0.0 0.0 4.475760167779868 29.407818218340367 4.475760167779868 1.6452935963211246 0 0.5 1.6989700043360187 0.0 0.4247425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))C]S{M(Oxidation (M))|F}QY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))C]AQYY{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[C(Carbamidomethyl (C))C]AYQY{I|L};[AG]{M(Oxidation (M))|F}C(Carbamidomethyl (C))[NS]S{M(Oxidation (M))|F}QY{I|L};[YQ][SG]C(Carbamidomethyl (C))Q{M(Oxidation (M))|F}QY{I|L};[AG]Y[SG]C(Carbamidomethyl (C))Q{M(Oxidation (M))|F}QY{I|L};[{I|L}P]Y[C(Carbamidomethyl (C))C]S{M(Oxidation (M))|F}QY{I|L};[{I|L}P]Y[C(Carbamidomethyl (C))C]AQYY{I|L};[AG]{M(Oxidation (M))|F}C(Carbamidomethyl (C))[NS]AQYY{I|L};[{I|L}P]Y[C(Carbamidomethyl (C))C]AYQY{I|L} 4.054;3.9267;3.8211;3.5783;3.5353;3.442;3.377;3.2497;3.1564;3.1441 -;-;-;-;-;-;-;-;-;- 2206 1 1.16 79076.8 1.0 11803 4985 16782 HBL1_DMSO_200M_050219_2,16790 HBL1_DMSO_200M_050219_2,16790,MLEPHSCQYI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16791 88.76 209.0 533880.0 25 0 74640.0 27068 PERVTPQSL 9 111 513.7845222234655 1025.554491513731 2 514.2836791872978 MULTI CID FTMS 0 0 0 16782 281722.9375 0.8474705424934121 -1 0.1100540161132812 9 Unmodified _PERVTPQSL_ ENSG00000011304|ENST00000356948|PTBP1;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1 25.399314129420983 0.2080152500878129 4 [EP]R{I|L}SM{I|L} 7 5 49.807 0.0 0.0 4.8566 0.0 0.0 0.0 196.09411543226705 196.09411543226705 -0.4371135593137722 0.0 -0.4371135593137722 0.0 0 0.0 1.3010299956639813 0.6747425010840047 1.079689690656103 [EP]R{I|L}SM{I|L} 4.8566 - 1249 1 1.16 91873.2 1.0 11804 4985 16782 HBL1_DMSO_200M_050219_2,16791 HBL1_DMSO_200M_050219_2,16791,PERVTPQSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16792 88.764 264.0 330300.0 25 0 33680.0 + 22103 LPPPVFQM 8 112 464.75067886505946 927.4868047969188 2 464.7513610720634 MULTI CID FTMS 0 0 0 16782 278467.0625 1.0 0 0.0 10 Unmodified _LPPPVFQM_ ENSG00000173726|ENST00000366607|TOMM20;ENST00000534518.1_1_11:77024925-77025045:+|nuORF 38.99230528602208 0.2511498934509823 4 [{I|L}P]PPV{M(Oxidation (M))|F}QM 8 0 + 38.403 0.0 0.0 4.1406 4.1406 66.991 0.0 0.0 0.0 9.121772672876569 9.121772672876569 9.121772672876569 1.34698573897456 0 0.8182503180159344 1.6989700043360187 0.0 0.0 + + [{I|L}P]PPV{M(Oxidation (M))|F}QM;[{I|L}P]{[ET]|[MV]}P{I|L}QM;[{I|L}P]PVP{M(Oxidation (M))|F}QM;[{I|L}P]{[ET]|[MV]}{I|L}PQM;[{I|L}P]PVM{I|L}QM;[{I|L}P]PV{M(Oxidation (M))|F}PQM;[{I|L}P][YN]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[VP]PP{I|L}{M(Oxidation (M))|F}QM;[{I|L}P]Q[QA]{I|L}QM;[YN]{M(Oxidation (M))|F}{I|L}[K{I|L}]M 4.1406;3.9954;3.983;3.6708;3.6585;3.3339;3.1571;3.0957;3.0842;2.8018 +;-;-;-;-;-;-;-;-;- + 381 1 1.16 68905.5 1.0 11805 4985 16782 HBL1_DMSO_200M_050219_2,16792 HBL1_DMSO_200M_050219_2,16792,LPPPVFQM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16793 88.767 127.0 495310.0 25 0 83170.0 + + 44398 DGRVYYICI 9 80 551.2731422276613 1100.5317315221223 2 551.2737304568291 MULTI CID FTMS 0 0 0 16782 256498.8125 0.7223964804483385 -1 0.1100540161132812 11 Unmodified _YLWQYCLL_ ENSG00000177485|ENST00000557385|ZBTB33 24.67388899826682 0.525179942228231 4 [Q{I|L}][WY]Y{I|L}C{I|L} 8 -1 + 41.942 0.0 0.0 3.8111 3.8111 79.003 0.0 0.0 0.0 1.9935592216109648 25.744171855527963 1.9935592216109648 12.11397036786964 0 0.5 0.0 0.0 0.6307196863200843 [Q{I|L}][WY]Y{I|L}C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K][KC]{I|L}C{I|L};[VP]YY[KC]{I|L}C{I|L} 3.8111;2.7103;1.9217 -;-;- 156 1 1.16 53434.5 1.0 11806 4985 16782 HBL1_DMSO_200M_050219_2,16793 HBL1_DMSO_200M_050219_2,16793,YLWQYCLL False False DGRVYYICI 88.767029 551.274 6801751.0 16782.0 ENSG00000177485|ENST00000557385|ZBTB33 4.898670514424642 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16794 88.772 240.0 294350.0 25 0 43054.0 16270 IVTWFLVL 8 91 495.80290195342 989.59125097364 2 495.8024474978447 MULTI CID FTMS 0 0 0 16782 229474.875 0.4703020779201149 1 -0.12225341796875 12 Unmodified _IVTWFLVL_ ENSG00000163812|ENST00000424952|ZDHHC3;nc|ENSG00000163812|Q9NYG2-2|ZDHHC3 20.453626601364224 0.6087503291685402 4 [H{I|L}]PEA{I|L}VV{I|L} 9 5 + 63.862 0.0 0.0 6.4533 6.4533 77.016 0.0 0.0 0.0 1.7609125905568137 16.478174818886373 1.7609125905568137 1.7609125905568137 0 0.9247425010840048 0.0 0.0 0.0 [H{I|L}]PEA{I|L}VV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EA{I|L}VV{I|L};[H{I|L}]PEAV{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EAV{I|L}V{I|L};[H{I|L}]PE{I|L}AVV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}E{I|L}AVV{I|L};[H{I|L}]PE{I|L}G{I|L}V{I|L};[{I|L}P]HEA{I|L}VV{I|L};[H{I|L}]P{I|L}EAVV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}E{I|L}G{I|L}V{I|L} 6.4533;6.2754;6.1491;5.9712;5.9712;5.7933;5.667;5.5994;5.4891;5.4891 -;-;-;-;-;-;-;-;-;- 656 1 1.16 59419.9 1.0 11807 4985 16782 HBL1_DMSO_200M_050219_2,16794 HBL1_DMSO_200M_050219_2,16794,IVTWFLVL False True LPHLEAVVI 88.771519 495.802447497845 12807165.0 16782.0 nc|ENSG00000137074|Q7Z2E3-12|APTX;;nc|ENSG00000137074|Q7Z2E3-9|APTX;;nc|ENSG00000137074|Q7Z2E3|APTX;;nc|ENSG00000137074|Q7Z2E3-13|APTX;;nc|ENSG00000137074|Q7Z2E3-11|APTX;;nc|ENSG00000137074|Q7Z2E3-8|APTX;;ENSG00000137074|ENST00000379817|APTX;;nc|ENSG00000137074|Q7Z2E3-5|APTX;;nc|ENSG00000137074|Q7Z2E3-10|APTX;;nc|ENSG00000137074|Q7Z2E3-3|APTX 4.574382146199544 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16795 88.782 582.0 934500.0 25 0 132800.0 2916 AVGFLLRH 8 164 456.774625368604 911.534697804008 2 456.7752868533134 MULTI CID FTMS 0 0 0 16782 207916.890625 0.9660591269656602 -1 0.1100540161132812 13 Unmodified _AVGFLLRH_ ENST00000396437.3_1_22:42341142-42343146:-|nuORF;nc|ENSG00000100162|Q9NSP4-2|CENPM 42.96799951952854 0.1846367511955703 4 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 7 6 + 94.883 0.0 0.0 10.409 10.409 94.955 0.0 0.0 0.0 16.320232147054057 17.413616938342727 16.320232147054057 9.33053210369387 0 1.305462187404089 0.0 0.0 2.135151878060192 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}RH;{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}RH;{M(Oxidation (M))|F}N{I|L}{I|L}[RH]{I|L};{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}{[HG]|PP}V;{M(Oxidation (M))|F}GG{I|L}{I|L}[RH]{I|L};{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}{[HG]|PP}V;{M(Oxidation (M))|F}N{I|L}{I|L}[HV]AV;{M(Oxidation (M))|F}N{I|L}{I|L}[HV]G{I|L} 10.409;9.3855;8.4988;7.4752;6.7037;6.2035;5.6801;4.7697;4.7308;4.6672 -;-;-;-;-;-;-;-;-;- 356 + 1 1.16 413507.8 1.0 11808 4985 16782 HBL1_DMSO_200M_050219_2,16795 HBL1_DMSO_200M_050219_2,16795,AVGFLLRH False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 16796 88.796 800.0 141600.0 25 0 13695.0 + 9442 FLASESLIKQI 11 142 624.8634718669184 1247.7123908006367 2 624.8631469607353 MULTI CID FTMS 0 0 0 16782 207281.46875 0.275568152547854 2 -0.2229690551757812 14 Unmodified _FLASESLIKQI_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 96.36657018975838 0.0004425842802536 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASE{[TV]|[{I|L}S]}{I|L}KQ{I|L} 11 0 + 63.779 0.0 0.0 5.1116 5.1116 84.039 0.0 0.0 0.0 24.3462486515656 15.48001702341292 15.48001702341292 12.381073231970952 0 1.110924374808178 0.0 0.3494850021680094 1.798455006504028 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASE{[TV]|[{I|L}S]}{I|L}KQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASE{[TV]|[{I|L}S]}{I|L}K[AG]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ASE{[TV]|[{I|L}S]}{I|L}KAAV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WT]|[RM]}{[TV]|[{I|L}S]}{I|L}KQ{I|L};[VP]{I|L}A{I|L}[YE]A{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}P]VA{I|L}[YE]A{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A][VP]{I|L}[YE]A{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}T]V[KQ]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SA{[QN]|[E{I|L}]|[KN]};[{I|L}A]GK{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SA{[QN]|[E{I|L}]|[KN]};[{I|L}A]GKC(Carbamidomethyl (C))A[KG]A{I|L}{M(Oxidation (M))|F}{I|L} 5.1116;4.1193;3.7868;3.2204;3.1523;2.2469;2.1731;1.9347;1.8624;1.8166 +;-;-;-;-;-;-;-;-;- + 2406 + 1 1.16 91912.8 0.8700000047683716 11809 4985 16782 HBL1_DMSO_200M_050219_2,16796 HBL1_DMSO_200M_050219_2,16796,FLASESLIKQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16797 88.8 223.0 483750.0 25 0 36321.0 -1 0 94 943.475313160726 1884.936073388252 2 943.9797241091728 MULTI CID FTMS 0 0 0 16782 204926.21875 0.7235495690185455 -8 0.931060791015625 15 4 [NP]N{I|L}{I|L}T 6 -1 29.456 0.0 0.0 1.5627 0.0 0.0 0.0 1229.5580032108262 1229.5580032108262 -1.1955095266810467 0.0 -1.1955095266810467 0.0 0 0.0 0.0 0.4247425010840047 0.6307196863200843 [NP]N{I|L}{I|L}T 1.5627 - 1056 1 1.16 76992.4 1.0 11810 4985 16782 HBL1_DMSO_200M_050219_2,16797 HBL1_DMSO_200M_050219_2,16797, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16798 88.814 800.0 264890.0 25 0 32153.0 + -1 VYLYGEMTW 9 169 589.2666878397516 1176.5188227463032 2 589.2659179568291 MULTI CID FTMS 0 0 0 16782 184746.265625 0.7016487536106801 -2 0.2088699340820312 16 Oxidation (M) _VYLYGEM(Oxidation (M))TW_ REV__ENSG00000165895|ENST00000298815|ARHGAP42 23.1484247019978 0.2366544122328345 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVEV 6 -1 51.744 0.0 0.0 4.3981 0.0 0.0 0.0 449.1515766286312 449.1515766286312 27.921656121837657 0.0 0.0 0.0 0 1.2614393726401687 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVEV 4.3981 - 4440 1 1.16 160156.2 0.800000011920929 11811 4985 16782 HBL1_DMSO_200M_050219_2,16798 HBL1_DMSO_200M_050219_2,16798,VYLYGEMTW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16799 88.82 254.0 294770.0 25 0 32415.0 + -1 MALKLDPIE 9 101 523.2822543578286 1044.5499557824571 2 523.2838012576103 MULTI CID FTMS 0 0 0 16782 152609.9375 0.5708602265547511 -1 0.1100540161132812 17 Oxidation (M) _M(Oxidation (M))ALKLDPIE_ REV__ENSG00000104885|ENST00000398665|DOT1L;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L 29.081581746732265 0.1611639662936252 4 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[QP]{I|L} 9 -1 + 40.965 0.0 0.0 3.9217 3.9217 79.554 0.0 0.0 0.0 8.753246544333777 15.7306842758112 8.753246544333777 12.47185618785927 0 0.8807196863200843 1.6989700043360187 0.3807196863200844 0.4247425010840047 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[QP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{[MS]|[{M(Oxidation (M))|F}A]}{I|L}PE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}PE{I|L};[K{I|L}]D{[MS]|[{M(Oxidation (M))|F}A]}{I|L}PE{I|L};[K{I|L}]D{I|L}{[MS]|[{M(Oxidation (M))|F}A]}PE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}AAPV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}[EP]MS{I|L} 3.9217;2.7277;2.4513;2.2792;2.0028;1.6887;1.6748;1.6124;1.5799;1.4777 -;-;-;-;-;-;-;-;-;- 585 + 1 1.16 66701.6 1.0 11812 4985 16782 HBL1_DMSO_200M_050219_2,16799 HBL1_DMSO_200M_050219_2,16799,MALKLDPIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16800 88.834 800.0 145690.0 25 0 7832.4 + 17063 KLDDIDITPLG 11 151 600.3293021298807 1198.644051326561 2 600.3296996951103 MULTI CID FTMS 0 0 0 16782 131348.296875 0.9660128321502212 -1 0.1100540161132812 18 Unmodified _KLDDIDITPLG_ REV__ENSG00000086758|ENST00000262854|HUWE1;REV__ENST00000488459.1_1_X:53560966-53561563:-|nuORF;REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;REV__nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 20.580933911654288 0.6070398941446662 4 {NN|[MP]|[D{I|L}]|[EV]}D{I|L}KV{M(Oxidation (M))|F}{I|L} 8 -1 37.929 0.0 0.0 3.1643 0.0 0.0 0.0 252.0990530583203 252.0990530583203 14.934008936763195 0.0 0.0 0.0 0 0.0 1.154901959985743 1.079689690656103 0.0 {NN|[MP]|[D{I|L}]|[EV]}D{I|L}KV{M(Oxidation (M))|F}{I|L} 3.1643 - 4271 1 1.16 84658.0 0.6499999761581421 11813 4985 16782 HBL1_DMSO_200M_050219_2,16800 HBL1_DMSO_200M_050219_2,16800,KLDDIDITPLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16801 88.847 800.0 164210.0 25 0 12580.0 + -1 KLFDDMMYEL 10 152 660.7961487043153 1319.5777444754306 2 660.7977783083916 MULTI CID FTMS 0 0 0 16782 115477.8984375 0.9896681606927716 -1 0.1100540161132812 19 Oxidation (M) _KLFDDMM(Oxidation (M))YEL_ ENSG00000000460|ENST00000359326|C1orf112 24.881564428377168 0.4096545554397951 4 [Q{I|L}][YV]DM{M(Oxidation (M))|F}YE{I|L} 10 -1 + 57.36 0.0 0.0 4.3468 4.3468 65.245 0.0 0.0 0.0 0.0422034070611161 16.53212513775344 0.0422034070611161 0.0422034070611161 0 0.4247425010840047 1.0457574905606752 0.6237125054200234 0.1803115997617927 [Q{I|L}][YV]DM{M(Oxidation (M))|F}YE{I|L};[YE]{I|L}{[NV]|[RG]}M{M(Oxidation (M))|F}YE{I|L};{[QN]|[E{I|L}]|[KN]}Y{[NV]|[RG]}M{M(Oxidation (M))|F}YE{I|L};[K{I|L}]{M(Oxidation (M))|F}DDM{M(Oxidation (M))|F}YE{I|L};{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]DM{M(Oxidation (M))|F}YE{I|L};{[VA]|[{I|L}G]}G[Y{I|L}]DM{M(Oxidation (M))|F}YE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[Y{I|L}]DM{M(Oxidation (M))|F}YE{I|L};{[VA]|[{I|L}G]}A[YV]DM{M(Oxidation (M))|F}YE{I|L};{I|L}{I|L}[YN]DM{M(Oxidation (M))|F}YE{I|L};[AG]V[Y{I|L}]DM{M(Oxidation (M))|F}YE{I|L} 4.3468;4.3436;3.9617;3.9261;3.8183;3.7613;3.7192;3.7013;3.698;3.6015 -;-;-;+;-;-;-;-;-;- + 1517 1 1.16 103248.9 0.6000000238418579 11814 4985 16782 HBL1_DMSO_200M_050219_2,16801 HBL1_DMSO_200M_050219_2,16801,KLFDDMMYEL False False KLFDDMMYEL 88.847466 660.797778308392 921356.25 16782.0 ENSG00000000460|ENST00000359326|C1orf112 5.479302167892456 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16802 88.857 489.0 141090.0 25 0 14399.0 + 4661 DAYVLPKLY 9 102 541.3007556989057 1080.5869584646114 2 541.3008911013603 MULTI CID FTMS 0 0 0 16782 115112.65625 0.7199173374351915 7 -0.70654296875 20 Unmodified _DAYVLPKLY_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 24.020572477871973 0.2255576514309169 4 [WY]V{I|L}P 5 5 27.333 0.0 0.0 2.5294 0.0 0.0 0.0 419.23017297916255 419.23017297916255 9.629843661361406 0.0 0.0 0.0 0 0.75 0.0 0.0 0.0 [WY]V{I|L}P 2.5294 - 179 + 1 1.16 60884.2 1.0 11815 4985 16782 HBL1_DMSO_200M_050219_2,16802 HBL1_DMSO_200M_050219_2,16802,DAYVLPKLY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16804 88.862 1.7 33045000.0 25 0 4440900.0 + 9192 FGGVLILIHR 10 77 375.5693297980315 1123.6861599942945 3 375.5696288943291 MULTI CID FTMS 0 0 0 16803 28620538.0 1.0 0 0.0 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 30.63653989081413 0.2803493085145199 4 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 89.218 0.0 0.0 7.9398 7.9398 91.749 0.0 0.0 0.0 77.01335651524651 18.46787486224656 18.46787486224656 9.208187539523747 0 0.7302046884880937 2.0 0.0 0.7302046884880937 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 7.9398;7.1203 -;- 113 + 1 1.163 52235.7 1.0 11816 4986 16803 HBL1_DMSO_200M_050219_2,16804 HBL1_DMSO_200M_050219_2,16804,FGGVLILIHR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16805 88.863 6.3 9892600.0 25 0 1009700.0 + 25199 MTKILLLHR 9 67 562.8500631029701 1123.6855732727402 2 562.8504516482353 MULTI CID FTMS 0 0 0 16803 8466587.0 1.0 0 0.0 2 Unmodified _MTKILLLHR_ REV__ENST00000507256.1_1_1:154407503-154427053:+|nuORF 31.26834338654808 0.1333407332142048 4 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 -1 + 108.64 0.0 0.0 9.668 9.668 93.771 0.0 0.0 0.0 98.18040976044614 14.09256854528806 14.09256854528806 9.208187539523747 0 1.579689690656103 2.0 0.0 0.4247425010840047 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 9.668;8.8485 -;- 133 + 1 1.163 56785.1 1.0 11817 4986 16803 HBL1_DMSO_200M_050219_2,16805 HBL1_DMSO_200M_050219_2,16805,MTKILLLHR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16806 88.864 7.7 6601600.0 25 0 463760.0 + 25072 MPVIPMNTI 9 81 508.2689851400359 1014.5234173468718 2 508.2691528201103 MULTI CID FTMS 0 0 0 16803 6500836.5 0.3686184201573174 -2 0.2323074340820312 3 Unmodified _MPVIPMNTI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 89.42679046578446 0.015225546354407 4 [VP]M{I|L}PMNT{I|L} 9 2 + 60.173 0.0 0.0 5.9311 5.9311 80.233 0.0 0.0 0.0 9.163865622122673 9.889917747712644 9.163865622122673 4.771212547196626 0 1.385151878060192 1.3979400086720375 0.0 0.0 [VP]M{I|L}PMNT{I|L};[VP]{I|L}MPMNT{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}PMNT{I|L};[VP]M{I|L}PMGGT{I|L};[VP]MP{I|L}MNT{I|L};[VP]{I|L}MPMGGT{I|L};[VP]{I|L}PMMNT{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}PMGGT{I|L};{NN|[MP]|[D{I|L}]|[EV]}VP{I|L}MNT{I|L};[VP]MP{I|L}MGGT{I|L} 5.9311;5.4608;5.0279;5.0235;4.9932;4.5532;4.3493;4.1202;4.0899;4.0856 -;-;+;-;-;-;-;-;-;- + 311 1 1.163 43833.3 1.0 11818 4986 16803 HBL1_DMSO_200M_050219_2,16806 HBL1_DMSO_200M_050219_2,16806,MPVIPMNTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16807 88.865 13.0 3821500.0 25 0 342270.0 + 14698 IIVDEAICSM 10 80 547.2663040776981 1092.5180552221962 2 547.2668334841728 MULTI CID FTMS 0 0 0 16803 3602083.5 1.0 0 0.0 4 Unmodified _IIVDEAICSM_ REV__ENSG00000181789|ENST00000314797|COPG1 25.399314129420983 0.3980215340001851 4 [TP]DT{I|L}{I|L}{I|L} 7 -1 57.299 0.0 0.0 5.2447 0.0 0.0 0.0 336.0669803533087 336.0669803533087 35.070392485107504 0.0 0.0 0.0 0 0.8252574989159953 1.154901959985743 1.6307196863200843 0.0 [TP]DT{I|L}{I|L}{I|L} 5.2447 - 332 1 1.163 44612.6 1.0 11819 4986 16803 HBL1_DMSO_200M_050219_2,16807 HBL1_DMSO_200M_050219_2,16807,IIVDEAICSM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16808 88.866 36.0 1315900.0 25 0 104250.0 + 1643 ALMPVLNQV 9 82 492.780954065238 983.547355197276 2 492.7809020876884 MULTI CID FTMS 0 0 0 16803 1405845.25 1.0 0 0.0 5 Unmodified _ALMPVLNQV_ ENSG00000223496|ENST00000435634|EXOSC6 63.562846038646086 0.0241094678104353 4 [VP]{I|L}NQ 5 4 31.695 0.0 0.0 3.2225 0.0 0.0 0.0 429.2179844299511 429.2179844299511 4.454388436631174 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.4247425010840047 + [VP]{I|L}NQ 3.2225 + + 346 1 1.163 43625.0 1.0 11820 4986 16803 HBL1_DMSO_200M_050219_2,16808 HBL1_DMSO_200M_050219_2,16808,ALMPVLNQV True True ALMPVLNQV 88.866495 492.780902087688 40280817.0 16803.0 ENSG00000223496|ENST00000435634|EXOSC6 6.897956530253093 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16809 88.868 90.0 745030.0 25 0 179700.0 + 27245 PGRSGGYT 8 80 397.6926401409388 793.3707273486776 2 397.6925536990166 MULTI CID FTMS 0 0 0 16803 710232.6875 0.9422330871505592 1 -0.1007156372070312 6 Unmodified _PGRSGGYT_ REV__ENST00000433948.5_2_12:50189219-50189822:-|nuORF 5.230669730166228 0.792582437072536 4 [DV]{I|L} 3 -1 26.796 0.0 0.0 3.3774 0.0 0.0 0.0 463.16818763604016 463.16818763604016 14.805906063131715 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [DV]{I|L} 3.3774 - 40 1 1.163 56134.0 1.0 11821 4986 16803 HBL1_DMSO_200M_050219_2,16809 HBL1_DMSO_200M_050219_2,16809,PGRSGGYT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16810 88.87 49.0 981020.0 25 0 102250.0 + 16425 IYYFKANVF 9 71 582.8076168258102 1163.6006807184203 2 582.8077880740166 MULTI CID FTMS 0 0 0 16803 712814.3125 0.7959360536620746 1 -0.1007156372070312 7 Unmodified _IYYFKANVF_ ENSG00000111229|ENST00000228825|ARPC3 30.22481116460888 0.1466181017706357 4 [Y{I|L}]Y{M(Oxidation (M))|F} 4 5 41.242 0.0 0.0 3.5444 0.0 0.0 0.0 574.3014010065061 574.3014010065061 20.82432436185812 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + [Y{I|L}]Y{M(Oxidation (M))|F} 3.5444 + + 266 + 1 1.163 44032.0 1.0 11822 4986 16803 HBL1_DMSO_200M_050219_2,16810 HBL1_DMSO_200M_050219_2,16810,IYYFKANVF False True IYYFKANVF 88.869802 582.807788074017 7963451.0 16803.0 ENSG00000111229|ENST00000228825|ARPC3 4.880458275477092 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16811 88.872 82.0 701230.0 25 0 77581.0 + 10773 FYPELKLAY 9 66 572.3075558243188 1142.6005587154375 2 572.3076660037041 MULTI CID FTMS 0 0 0 16803 619078.375 1.0 0 0.0 8 Unmodified _FYPELKLAY_ ENSG00000157349|ENST00000288071|DDX19B;ENSG00000168872|ENST00000302243|DDX19A;ENST00000562140.2_1_16:70398455-70404584:+|nuORF;ENST00000566574.5_1_16:70398922-70399087:+|nuORF;ENST00000567012.5_1_16:70398922-70400166:+|nuORF;ENST00000569319.5_1_16:70395351-70399888:+|nuORF;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;nc|ENSG00000168872|Q9NUU7-2|DDX19A;nc|ENSG00000260537|Q9UMR2-2|DDX19B;nc|ENSG00000260537|Q9UMR2-3|DDX19B;nc|ENSG00000260537|Q9UMR2-4|DDX19B 25.399314129420983 0.2080152500878129 4 [EP]{I|L}K{I|L}A 6 3 47.0 0.0 0.0 4.1134 0.0 0.0 0.0 488.1826049405585 488.1826049405585 9.899093853315073 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.7614393726401688 0.0 + [EP]{I|L}K{I|L}A 4.1134 + + 64 1 1.163 52359.2 1.0 11823 4986 16803 HBL1_DMSO_200M_050219_2,16811 HBL1_DMSO_200M_050219_2,16811,FYPELKLAY False True FYPELKLAY 88.871666 572.307666003704 10966553.0 16803.0 ENST00000566574.5_1_16:70398922-70399087:+|nuORF;;nc|ENSG00000168872|Q9NUU7-2|DDX19A;;ENST00000567012.5_1_16:70398922-70400166:+|nuORF;;ENST00000569319.5_1_16:70395351-70399888:+|nuORF;;ENSG00000168872|ENST00000302243|DDX19A;;nc|ENSG00000260537|Q9UMR2-4|DDX19B;;nc|ENSG00000260537|Q9UMR2-2|DDX19B;;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;;nc|ENSG00000260537|Q9UMR2-3|DDX19B;;ENST00000562140.2_1_16:70398455-70404584:+|nuORF;;ENSG00000157349|ENST00000288071|DDX19B 6.852757294972737 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16812 88.873 80.0 651750.0 25 0 89760.0 + 15391 IPPDLFARM 9 62 530.2870011069097 0 530.2861816287041 PEAK CID FTMS 0 0 0 16803 437711.9375 1.0 0 0.0 9 Unmodified _IPPDLFARM_ ENSG00000187735|ENST00000521604|TCEA1;ENST00000521086.6_1_8:54891227-54912595:-|nuORF;nc|ENSG00000187735|P23193-2|TCEA1 17.11289562659939 0.230679707888486 4 PPD{I|L} 4 5 24.68 0.0 0.0 2.3315 0.0 0.0 113.0849626193977 520.2335299127561 633.3184925321539 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + PPD{I|L} 2.3315 + + 31 + 1 1.163 50462.7 1.0 11824 4986 16803 HBL1_DMSO_200M_050219_2,16812 HBL1_DMSO_200M_050219_2,16812,IPPDLFARM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16813 88.876 91.0 515580.0 25 0 62952.0 + 26567 NVLESLHMV 9 79 521.2737313199789 1040.5329097067577 2 521.2739745974541 MULTI CID FTMS 0 0 0 16803 284255.6875 1.0 0 0.0 10 Unmodified _NVLESLHMV_ ENSG00000129173|ENST00000250024|E2F8 34.10243960390752 0.1078313939113124 4 {[NV]|[RG]}{I|L}E{[TV]|[{I|L}S]}HMV 9 0 + 17.43 0.0 0.0 1.6751 1.6751 71.608 0.0 0.0 0.0 4.242207192082267 2.945091026210968 2.945091026210968 8.243497992151395 0 0.805462187404089 0.0 0.0 0.0 + + {[NV]|[RG]}{I|L}E{[TV]|[{I|L}S]}HMV;{[NV]|[RG]}[{M(Oxidation (M))|F}T]{I|L}E[YR];{[NV]|[RG]}[{M(Oxidation (M))|F}T]{I|L}[WY]V 1.6751;0.88285;0.2602 +;-;- + 179 + 1 1.163 40840.2 1.0 11825 4986 16803 HBL1_DMSO_200M_050219_2,16813 HBL1_DMSO_200M_050219_2,16813,NVLESLHMV True True NVLESLHMV 88.875516 521.273974597454 1974124.625 16803.0 ENSG00000129173|ENST00000250024|E2F8 6.866297721862793 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16814 88.878 97.0 476050.0 25 0 59321.0 + 16010 TILEQIPGM 9 79 499.7694131733822 997.5242734135644 2 501.2700378298759 MULTI CID FTMS 0 0 0 16803 268443.53125 1.0 0 0.0 11 Unmodified _ITELHSWI_ ENSG00000151176|ENST00000280800|PLBD2 20.871210003555333 0.6025813472596342 4 [{I|L}T]{I|L}E 4 5 34.085 0.0 0.0 3.417 0.0 0.0 0.0 538.2433645603019 538.2433645603019 16.918402966525576 0.0 0.0 0.0 0 0.0 2.0 0.805462187404089 0.0 [{I|L}T]{I|L}E 3.417 - 123 1 1.163 39755.9 1.0 11826 4986 16803 HBL1_DMSO_200M_050219_2,16814 HBL1_DMSO_200M_050219_2,16814,ITELHSWI False False TILEQIPGM 88.877614 501.270037829876 2603685.0 16803.0 ENSG00000151176|ENST00000280800|PLBD2 5.702012697855632 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16815 88.891 800.0 317240.0 25 0 89957.0 + 24234 MALPEEYRDYF 11 128 717.3225506405334 1432.6305483478668 2 717.3229247927666 MULTI CID FTMS 0 0 0 16803 145945.09375 1.0 0 0.0 12 Unmodified _MALPEEYRDYF_ ENSG00000134014|ENST00000256398|ELP3;nc|ENSG00000134014|Q9H9T3-2|ELP3;nc|ENSG00000134014|Q9H9T3-4|ELP3;nc|ENSG00000134014|Q9H9T3-5|ELP3 63.22749603027936 0.0560465731344335 4 MA{I|L}PEEC(Carbamidomethyl (C)){I|L}SP{[WT]|[RM]} 12 6 + 94.617 0.0 0.0 6.6044 6.6044 79.318 0.0 0.0 0.0 14.4544501595674 2.7965371354087125 2.7965371354087125 2.7965371354087125 0 1.0 1.6989700043360187 1.4749073637206092 0.3807196863200844 MA{I|L}PEEC(Carbamidomethyl (C)){I|L}SP{[WT]|[RM]};MA{I|L}PEEC(Carbamidomethyl (C)){I|L}SAPC{I|L};MA{I|L}PEEC(Carbamidomethyl (C)){I|L}SPAC{I|L};MA{I|L}PEEY[RD]Y{M(Oxidation (M))|F};MA{I|L}PEEY[NG]PPC{I|L};MA{I|L}PEE[CG]{I|L}SP{[WT]|[RM]};MA{I|L}PEE{[CT]|[{M(Oxidation (M))|F}G]}RAPC{I|L};MA{I|L}PEE[CG]{I|L}SAPC{I|L};MA{I|L}PEEY[RD]{M(Oxidation (M))|F}Y;MA{I|L}PEE{[CT]|[{M(Oxidation (M))|F}G]}RP{[WT]|[RM]} 6.6044;6.4092;6.3072;6.0986;6.0603;5.9693;5.795;5.7759;5.7532;5.7244 -;-;-;+;-;-;-;-;-;- + 4557 + 1 1.163 178439.5 0.7599999904632568 11827 4986 16803 HBL1_DMSO_200M_050219_2,16815 HBL1_DMSO_200M_050219_2,16815,MALPEEYRDYF True True MALPEEYRDYF 88.891445 717.322924792767 1355832.875 16803.0 nc|ENSG00000134014|Q9H9T3-5|ELP3;;nc|ENSG00000134014|Q9H9T3-2|ELP3;;ENSG00000134014|ENST00000256398|ELP3;;nc|ENSG00000134014|Q9H9T3-4|ELP3 7.316598892211914 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16816 88.905 800.0 125840.0 25 0 10310.0 -1 FMFDEKLVTV 10 132 622.8148426372084 1243.6151323412166 2 622.8162719607353 MULTI CID FTMS 0 0 0 16803 141614.859375 0.946518798369749 1 -0.1007156372070312 13 Oxidation (M) _FM(Oxidation (M))FDEKLVTV_ ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C 34.93206674587334 0.2110832994570416 4 YY{I|L}[TA]{I|L}[WD]TV 10 -1 + 49.306 0.0 0.0 3.9647 3.9647 66.133 0.0 0.0 0.0 16.707387938424553 1.249387366082999 1.249387366082999 1.249387366082999 0 0.7134679910804405 2.0 0.6307196863200843 0.0 YY{I|L}[TA]{I|L}[WD]TV;YY{I|L}[TA]{I|L}[WD]S{I|L};YY[VS]V{I|L}[WD]TV;YY[VS]V{I|L}[WD]S{I|L};YY{I|L}DT{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L};YY{I|L}DT{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QY{I|L}VMYTV;YY{I|L}D[YR][VG]PV;{[TV]|[{I|L}S]}[DG]{M(Oxidation (M))|F}{I|L}VMYTV;YY{I|L}[TA]{M(Oxidation (M))|F}D[VG]PV 3.9647;3.8642;3.7325;3.6321;3.0441;2.9081;2.6212;2.5207;2.4899;2.4831 -;-;-;-;-;-;-;-;-;- 4005 + 1 1.163 78495.9 0.7799999713897705 11828 4986 16803 HBL1_DMSO_200M_050219_2,16816 HBL1_DMSO_200M_050219_2,16816,FMFDEKLVTV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16817 88.915 545.0 166520.0 25 0 15054.0 + 3719 DAFQLAVNV 9 144 488.75914603151625 975.5037391298324 2 488.7582885622978 MULTI CID FTMS 0 0 0 16803 119739.34375 0.5386091079568093 4 -0.3854522705078125 14 Unmodified _DAFQLAVNV_ ENSG00000048028|ENST00000696973|USP28;ENST00000540438.5_1_11:113691037-113702685:-|nuORF;nc|ENSG00000048028|Q96RU2-2|USP28;nc|ENSG00000048028|Q96RU2-3|USP28;nc|ENSG00000048028|Q96RU2|USP28 21.53697664764585 0.2571576504437394 4 [DP]{I|L}YM[KP]{I|L} 8 8 + 26.445 0.0 0.0 2.7109 2.7109 62.087 0.0 0.0 0.0 2.389273870334115 0.7521226932963998 0.7521226932963998 0.7521226932963998 0 0.25 0.0 0.0 0.0 [DP]{I|L}YM[KP]{I|L};[DP]{I|L}Y[KQ]NV;{[QN]|[E{I|L}]|[KN]}H{I|L}GT{I|L}{[HG]|PP};{[QN]|[E{I|L}]|[KN]}H{[SA]|[TG]}{I|L}{I|L}{[HG]|PP};[DP]{I|L}YVRDV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VY{I|L}{[HG]|PP};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KVY{I|L}{[HG]|PP};[DP]{I|L}YV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{[QN]|[E{I|L}]|[KN]}H{I|L}{I|L}GT{[HG]|PP};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YV]{I|L}{I|L}{[HG]|PP} 2.7109;2.6338;2.466;2.3698;2.3575;2.2904;2.1099;1.7327;1.55;1.4745 -;-;-;-;-;-;-;-;-;- 757 + 1 1.163 72660.3 1.0 11829 4986 16803 HBL1_DMSO_200M_050219_2,16817 HBL1_DMSO_200M_050219_2,16817,DAFQLAVNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16818 88.929 800.0 176280.0 25 0 89969.0 -1 0 80 924.4771075292738 0 924.4758788943292 PEAK CID FTMS 0 0 0 16803 122288.59375 1.0 0 0.0 15 4 V 1 -1 11.99 0.0 0.0 0.64917 0.0 0.0 1561.8073206720255 183.04134546451408 1744.8486661365396 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V 0.64917 - 36 + 1 1.163 97375.7 0.7400000095367432 11830 4986 16803 HBL1_DMSO_200M_050219_2,16818 HBL1_DMSO_200M_050219_2,16818, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16819 88.943 800.0 254080.0 25 0 28100.0 + 20744 LLSPVVPQI 9 185 483.3050873058521 964.5956216785042 2 483.3045532107353 MULTI CID FTMS 0 0 0 16803 98825.4453125 0.4913626590145118 -2 0.2323074340820312 16 Unmodified _LLSPVVPQI_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 64.23631603340823 0.0237365939569086 4 {[TV]|[{I|L}S]}R{I|L}{I|L}VS 7 7 43.328 0.0 0.0 4.4919 0.0 0.0 0.0 193.0984285943969 193.0984285943969 16.41711911368644 0.0 0.0 0.0 0 0.5 1.154901959985743 1.3001648626366045 0.0 {[TV]|[{I|L}S]}R{I|L}{I|L}VS 4.4919 - 2654 + 1 1.163 154397.0 0.550000011920929 11831 4986 16803 HBL1_DMSO_200M_050219_2,16819 HBL1_DMSO_200M_050219_2,16819,LLSPVVPQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16820 88.958 800.0 78737.0 25 0 3881.4 -1 0 93 994.479806863742 0 994.472216784954 PEAK CID FTMS 0 0 0 16803 98107.9140625 0.9411772685591672 -2 0.2323074340820312 17 4 {I|L}V[CS]V 5 -1 10.859 0.0 0.0 0.5465 0.0 0.0 1225.5785567502885 257.0934237115844 1482.6719804618726 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 {I|L}V[CS]V 0.5465 - 252 + 1 1.163 49383.7 0.7099999785423279 11832 4986 16803 HBL1_DMSO_200M_050219_2,16820 HBL1_DMSO_200M_050219_2,16820, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16822 88.962 11.0 4592900.0 25 0 336080.0 + 8904 FAFRYVTTI 9 76 559.3052814346896 1116.5960099361791 2 559.3057128787041 MULTI CID FTMS 0 0 0 16821 4046918.75 0.7033941404023402 1 -0.1058349609375 1 Unmodified _FAFRYVTTI_ ENSG00000187325|ENST00000341864|TAF9B;ENSG00000273841|ENST00000217893|TAF9;ENST00000480681.1_1_X:77393446-77395117:-|nuORF;ENST00000587506.1_1_19:30528395-30528668:+|nuORF 60.07390631473393 0.0260411565414776 4 YVTT{I|L} 5 4 42.964 0.0 0.0 3.8478 0.0 0.0 521.2740345685562 0.0 521.2740345685562 0.0 21.29152766893085 0.0 0.0 0 0.8807196863200843 0.0 1.0 0.0 + YVTT{I|L} 3.8478 + + 216 1 1.163 44428.0 1.0 11833 4987 16821 HBL1_DMSO_200M_050219_2,16822 HBL1_DMSO_200M_050219_2,16822,FAFRYVTTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16823 88.964 72.0 765680.0 25 0 108810.0 + 21495 LPHVPLGVI 9 71 472.7997630750537 943.5849732169072 2 472.7997314333916 MULTI CID FTMS 0 0 0 16821 644280.8125 0.1692699349987244 3 -0.2847366333007812 2 Unmodified _LPHVPLGVI_ ENSG00000115307|ENST00000377526|AUP1;ENST00000462297.1_1_2:74754523-74754670:-|nuORF;ENST00000463900.5_1_2:74753929-74756164:-|nuORF;ENST00000466894.5_1_2:74754206-74756164:-|nuORF;ENST00000486234.1_1_2:74754275-74754965:-|nuORF;nc|ENSG00000115307|Q9Y679-3|AUP1 36.46614268402704 0.0948557732959553 4 [HV]P{I|L}GP{I|L}V{I|L} 9 4 + 80.353 0.0 0.0 8.5158 8.5158 88.878 0.0 0.0 0.0 18.239087409443187 16.478174818886373 16.478174818886373 6.020599913279625 0 0.75 1.5228787452803376 0.0 0.0 [HV]P{I|L}GP{I|L}V{I|L};[HV]P{I|L}PG{I|L}V{I|L};[HV]P{I|L}GPV{I|L}{I|L};[HV]P{I|L}GVP{I|L}{I|L};[HV]P{I|L}PGV{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}GP{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VGP{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}PG{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VPG{I|L}V{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}GPV{I|L}{I|L} 8.5158;7.8777;7.852;7.533;7.214;6.5828;6.5698;5.9447;5.9317;5.9191 -;-;-;-;-;-;-;-;-;- 504 1 1.163 47044.6 1.0 11834 4987 16821 HBL1_DMSO_200M_050219_2,16823 HBL1_DMSO_200M_050219_2,16823,LPHVPLGVI True True LPHVPLGVI 88.96418 472.799731433392 130859952.0 16821.0 ENST00000466894.5_1_2:74754206-74756164:-|nuORF;;ENST00000486234.1_1_2:74754275-74754965:-|nuORF;;ENST00000463900.5_1_2:74753929-74756164:-|nuORF;;nc|ENSG00000115307|Q9Y679-3|AUP1;;ENST00000462297.1_1_2:74754523-74754670:-|nuORF;;ENSG00000115307|ENST00000377526|AUP1 4.0439713795979815 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16824 88.965 27.0 2266600.0 25 0 324920.0 -1 LICALCKLV 9 81 545.3094611382402 1088.6043693432805 2 545.3099243044853 MULTI CID FTMS 0 0 0 16821 1844412.75 0.780262651497677 1 -0.1058349609375 3 2 Carbamidomethyl (C) _LIC(Carbamidomethyl (C))ALC(Carbamidomethyl (C))KLV_ ENSG00000080561|ENST00000262843|MID2;ENSG00000101871|ENST00000317552|MID1;nc|ENSG00000080561|Q9UJV3-2|MID2;nc|ENSG00000101871|O15344-2|MID1 9.347437153973935 0.588369872918737 4 {I|L}{M(Oxidation (M))|F}KNM 5 -1 24.469 0.0 0.0 2.2477 0.0 0.0 247.1877201175148 205.06281458072505 452.2505346982398 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 {I|L}{M(Oxidation (M))|F}KNM 2.2477 - 120 + 1 1.163 49588.4 1.0 11835 4987 16821 HBL1_DMSO_200M_050219_2,16824 HBL1_DMSO_200M_050219_2,16824,LICALCKLV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16825 88.97 221.0 610870.0 25 0 85933.0 + -1 LTSCPMLCL 9 93 527.2425884576086 1052.470623982017 2 527.2428466677666 MULTI CID FTMS 0 0 0 16821 617467.8125 1.0 0 0.0 4 Carbamidomethyl (C),Oxidation (M) _LTSCPM(Oxidation (M))LC(Carbamidomethyl (C))L_ REV__ENST00000319080.7_12:122626711-122626864:+|nuORF 14.838274106304384 0.4350285940865338 4 {I|L}{M(Oxidation (M))|F}[DC]P{[WS]|[C(Carbamidomethyl (C)){I|L}]}SV 9 -1 + 28.055 0.0 0.0 2.6656 2.6656 71.003 0.0 0.0 0.0 11.149021710101652 1.3760705937508997 1.3760705937508997 6.478174818886377 0 0.0 0.0 0.3494850021680094 0.0 {I|L}{M(Oxidation (M))|F}[DC]P{[WS]|[C(Carbamidomethyl (C)){I|L}]}SV;{I|L}{M(Oxidation (M))|F}[WE]{[WS]|[C(Carbamidomethyl (C)){I|L}]}SV;{I|L}{M(Oxidation (M))|F}[DC]P[EC]KV;{I|L}{M(Oxidation (M))|F}[WE][EC]KV;{[TV]|[{I|L}S]}[YN][WE]E{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QS]|[NT]}[WY]E{I|L} 2.6656;2.0501;1.9263;1.3108;0.40666;0.028564 -;-;-;-;-;- 179 + 1 1.163 109873.6 1.0 11836 4987 16821 HBL1_DMSO_200M_050219_2,16825 HBL1_DMSO_200M_050219_2,16825,LTSCPMLCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16826 88.972 95.0 870810.0 25 0 55268.0 -1 MPVMNLAVF 9 100 519.2597261322937 1036.5048993313874 2 519.2600585818291 MULTI CID FTMS 0 0 0 16821 615259.875 1.0 0 0.0 5 Oxidation (M) _MPVM(Oxidation (M))NLAVF_ ENST00000540918.2_1_18:21710325-21710370:+|nuORF 16.942295170755138 0.3780752226737986 4 MPV{I|L}{I|L} 5 -1 55.015 0.0 0.0 5.3077 0.0 0.0 0.0 480.1529024713501 480.1529024713501 30.57778195264365 0.0 0.0 0.0 0 0.7302046884880937 1.3979400086720375 0.0 0.0 MPV{I|L}{I|L} 5.3077 - 298 + 1 1.163 70971.5 1.0 11837 4987 16821 HBL1_DMSO_200M_050219_2,16826 HBL1_DMSO_200M_050219_2,16826,MPVMNLAVF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16827 88.975 165.0 386480.0 25 0 34001.0 + 36180 SVVPQQLLTV 10 100 542.3241846782636 0 542.3239623904228 PEAK CID FTMS 0 0 0 16821 378276.34375 1.0 0 0.0 6 Unmodified _SVVPQQLLTV_ ENSG00000072310|ENST00000261646|SREBF1;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1 38.17557092003332 0.1299896074792053 4 AT{I|L}{I|L}Q 5 8 32.479 0.0 0.0 3.0 0.0 0.0 331.2107950383645 222.0885408990844 553.299335937449 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.3807196863200844 AT{I|L}{I|L}Q 3 - 195 + 1 1.163 56340.4 1.0 11838 4987 16821 HBL1_DMSO_200M_050219_2,16827 HBL1_DMSO_200M_050219_2,16827,SVVPQQLLTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16828 88.979 221.0 474110.0 25 0 87675.0 + 21266 LPEAPVLL 8 94 426.26472362634 850.51489431948 2 426.2649108767509 MULTI CID FTMS 0 0 0 16821 280731.75 0.8057248209872313 -2 0.2229690551757812 7 Unmodified _LPEAPVLL_ REV__ENST00000284984.7_1_21:28217444-28217693:-|nuORF 24.67388899826682 0.525179942228231 4 [VP][DV]PV{I|L}{I|L} 8 -1 + 28.082 0.0 0.0 3.3018 3.3018 65.695 0.0 0.0 0.0 1.9576404378418744 7.508943624335558 1.9576404378418744 1.9576404378418744 0 0.6989700043360187 1.2218487496163564 0.0 0.0 [VP][DV]PV{I|L}{I|L};[EP]PA{I|L}V{I|L}{I|L};[EP]AP{I|L}V{I|L}{I|L};[EP]A{I|L}PV{I|L}{I|L};[EP]PAV{I|L}{I|L}{I|L};[EP]APV{I|L}{I|L}{I|L};{[HG]|PP}EA{I|L}V{I|L}{I|L};[EP]{I|L}APV{I|L}{I|L};[VP][DV]P{I|L}V{I|L};{[HG]|PP}EAV{I|L}{I|L}{I|L} 3.3018;3.0716;3.0716;2.8646;2.7177;2.7177;2.5753;2.4505;2.2932;2.2214 -;-;-;-;-;-;-;-;-;- 202 1 1.163 86936.3 1.0 11839 4987 16821 HBL1_DMSO_200M_050219_2,16828 HBL1_DMSO_200M_050219_2,16828,LPEAPVLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16829 88.993 800.0 200300.0 25 0 15529.0 + 16785 KGIDYDFPSL 10 163 577.789891335107 1153.565229737014 2 577.7898437380791 MULTI CID FTMS 0 0 0 16821 254328.765625 0.4936644782355383 1 -0.1058349609375 8 Unmodified _KGIDYDFPSL_ ENSG00000155438|ENST00000285814|NIFK;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 57.2037768669896 0.0439211711061507 4 [PS]TKYD{M(Oxidation (M))|F}PS{I|L} 10 4 + 84.275 0.0 0.0 7.3056 7.3056 91.309 0.0 0.0 0.0 9.604093769761874 17.09105848590866 9.604093769761874 9.604093769761874 0 1.3424778212679485 1.2218487496163564 2.197621246364342 0.0 [PS]TKYD{M(Oxidation (M))|F}PS{I|L};[VG]EKYD{M(Oxidation (M))|F}PS{I|L};{NN|[MP]|[D{I|L}]|[EV]}GKYD{M(Oxidation (M))|F}PS{I|L};[PS]TYKD{M(Oxidation (M))|F}PS{I|L};[PS]TKY{M(Oxidation (M))|F}DPS{I|L};[PS]TKYDTMV{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}YD{M(Oxidation (M))|F}PS{I|L};[PS]TKY{M(Oxidation (M))|F}SDP{I|L};{NN|[MP]|[D{I|L}]|[EV]}GK{M(Oxidation (M))|F}M{M(Oxidation (M))|F}PS{I|L};{[VA]|[{I|L}G]}KDYD{M(Oxidation (M))|F}PS{I|L} 7.3056;6.473;6.4488;6.1484;6.0323;5.7788;5.652;5.5495;5.5365;5.3359 -;-;-;-;-;-;-;-;-;- 7134 1 1.163 130888.2 0.9700000286102296 11840 4987 16821 HBL1_DMSO_200M_050219_2,16829 HBL1_DMSO_200M_050219_2,16829,KGIDYDFPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16830 89.002 545.0 219090.0 25 0 70314.0 + 29615 QLWYLRSVLI 10 73 430.9235523642548 0 430.8879272341728 PEAK CID FTMS 0 0 0 -1 0 9 Unmodified _QLWYLRSVLI_ REV__ENST00000502271.5_1_5:53182250-53182346:-|nuORF 1.9063754702782607 0.3961065659209837 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.163 97772.7 1.0 11841 4987 16821 HBL1_DMSO_200M_050219_2,16830 HBL1_DMSO_200M_050219_2,16830,QLWYLRSVLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16831 89.008 297.0 268270.0 25 0 35680.0 + 45764 YYISPRLTF 9 83 580.3110719907387 1158.6075910482773 2 580.3109008669853 MULTI CID FTMS 0 0 0 16821 192496.828125 0.0078830125334593 8 -0.7038955688476562 10 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 24.99096001346401 0.2132109383330889 4 YY{I|L}SP 5 4 62.228 0.0 0.0 5.3709 0.0 0.0 0.0 532.2852266900999 532.2852266900999 47.40458649784341 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + YY{I|L}SP 5.3709 + + 125 + 1 1.163 67697.7 1.0 11842 4987 16821 HBL1_DMSO_200M_050219_2,16831 HBL1_DMSO_200M_050219_2,16831,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16832 89.013 301.0 916350.0 25 0 72073.0 + 25078 MPVPWALSP 9 171 499.264634613711 0 499.2645141482353 PEAK CID FTMS 0 0 0 16821 167137.671875 0.6891301821289159 -1 0.1007156372070312 11 Unmodified _MPVPWALSP_ ENST00000500527.1_1_12:31226463-31226562:-|nuORF 30.22481116460888 0.1097735003385577 4 PV{I|L}PMNE 7 7 60.671 0.0 0.0 6.0884 0.0 0.0 131.0427483246453 82.06678949527577 213.10953781992103 0.0 0.0 0.0 0.0 0 2.4049471895720984 0.0 1.2302046884880935 0.6139829889124311 PV{I|L}PMNE 6.0884 - 2811 + 1 1.163 207185.2 1.0 11843 4987 16821 HBL1_DMSO_200M_050219_2,16832 HBL1_DMSO_200M_050219_2,16832,MPVPWALSP True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16833 89.016 137.0 317320.0 25 0 27199.0 + 33445 SICREHALT 9 97 515.2602552901387 1028.5059576470774 2 516.2642700076103 MULTI CID FTMS 0 0 0 16821 173500.21875 1.0 0 0.0 12 Unmodified _SICREHALT_ REV__ENSG00000115760|ENST00000421745|BIRC6 11.640296217721598 0.521594087909532 4 T{I|L} 2 -1 20.261 0.0 0.0 1.9699 0.0 0.0 796.3634538402399 0.0 796.3634538402399 0.0 0.339322000954283 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 T{I|L} 1.9699 - 240 + 1 1.163 40562.7 1.0 11844 4987 16821 HBL1_DMSO_200M_050219_2,16833 HBL1_DMSO_200M_050219_2,16833,SICREHALT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16834 89.031 800.0 293790.0 25 0 38847.0 + -1 RILDIDIPMSV 11 132 644.3534249168077 1286.6922969004154 2 644.3517333865166 MULTI CID FTMS 0 0 0 16821 164247.515625 0.6417143335400989 -1 0.1007156372070312 13 Oxidation (M) _RLLDLDIPM(Oxidation (M))SV_ nc|ENSG00000135457|Q12800-2|TFCP2;ENSG00000135457|ENST00000257915|TFCP2;nc|ENSG00000135457|Q12800-4|TFCP2;nc|ENSG00000135457|Q12800-3|TFCP2 81.9152076656658 0.0062322988290358 4 {NN|[MP]|[D{I|L}]|[EV]}GV{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W 11 -1 + 83.677 0.0 0.0 6.5033 6.5033 88.577 0.0 0.0 0.0 9.44592953041652 7.138798199450804 7.138798199450804 9.44592953041652 0 1.579689690656103 0.958607314841775 1.2059771852360797 0.805462187404089 {NN|[MP]|[D{I|L}]|[EV]}GV{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;[VS][TP]{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;{[QN]|[E{I|L}]|[KN]}AA{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;[TP]SV{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;{[DA]|[EG]}VV{I|L}{I|L}D{I|L}P{M(Oxidation (M))|F}W;{NN|[MP]|[D{I|L}]|[EV]}GV{I|L}{I|L}D{I|L}PT[MT];{[QN]|[E{I|L}]|[KN]}[RV]{I|L}D{I|L}P{M(Oxidation (M))|F}W;{I|L}{I|L}RD{I|L}D{I|L}P{M(Oxidation (M))|F}W;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}D{I|L}P{M(Oxidation (M))|F}W;[VS][{I|L}P]T{I|L}D{I|L}P{M(Oxidation (M))|F}W 6.5033;5.7691;5.7418;5.5253;5.5179;5.3091;5.2704;5.1794;5.1144;4.9701 -;-;-;-;-;-;-;-;-;- 1076 1 1.163 176501.3 0.7900000214576721 11845 4987 16821 HBL1_DMSO_200M_050219_2,16834 HBL1_DMSO_200M_050219_2,16834,RLLDLDIPMSV False False RILDIDIPMSV 89.031209 644.351733386517 3144814.0 16821.0 nc|ENSG00000135457|Q12800-2|TFCP2;;ENSG00000135457|ENST00000257915|TFCP2;;nc|ENSG00000135457|Q12800-4|TFCP2;;nc|ENSG00000135457|Q12800-3|TFCP2 7.258974552154541 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16835 89.038 370.0 272490.0 25 0 64149.0 + 24916 MPPEPIII 8 116 455.25902358556806 908.503494237936 2 455.2592651247978 MULTI CID FTMS 0 0 0 16821 152703.515625 0.6727982504674225 -4 0.4318389892578125 14 Unmodified _MPPEPIII_ ENSG00000066117|ENST00000394963|SMARCD1;nc|ENSG00000066117|Q96GM5-2|SMARCD1 26.34127834903884 0.4900704351052977 4 [{I|L}P][EP]PM{I|L}{I|L} 8 2 + 30.067 0.0 0.0 3.3095 3.3095 64.757 0.0 0.0 0.0 1.5296746020854357 7.107952948012652 1.5296746020854357 1.5296746020854357 0 0.8182503180159344 1.3010299956639813 0.0 0.0 [{I|L}P][EP]PM{I|L}{I|L};[EP]P{I|L}PM{I|L}{I|L};{[HG]|PP}E{I|L}PM{I|L}{I|L};[EP]PMP{I|L}{I|L}{I|L};{[HG]|PP}EMP{I|L}{I|L}{I|L};[EP]PP{I|L}M{I|L}{I|L};{[HG]|PP}EP{I|L}M{I|L}{I|L};[EP]PPM{I|L}{I|L}{I|L};{[HG]|PP}EPM{I|L}{I|L}{I|L};[{I|L}P][EP]P{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.3095;3.1411;2.9889;2.9473;2.7951;2.7031;2.5509;2.3717;2.2195;2.0775 -;-;-;-;-;-;-;-;-;- 273 1 1.163 86802.4 1.0 11846 4987 16821 HBL1_DMSO_200M_050219_2,16835 HBL1_DMSO_200M_050219_2,16835,MPPEPIII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16836 89.045 383.0 348760.0 25 0 24593.0 + 24028 LVYPEELKPVL 11 104 650.3818045448006 1298.7490561564011 2 650.3813964724541 MULTI CID FTMS 0 0 0 16821 132543.796875 0.3883447094163716 -3 0.3330230712890625 15 Unmodified _LVYPEELKPVL_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 51.41523569358685 0.1097924807909074 4 [{I|L}V]YPEE{I|L}KPV{I|L} 11 0 + 71.878 0.0 0.0 5.5344 5.5344 81.961 0.0 0.0 0.0 22.596373105057552 8.23908740944318 8.23908740944318 8.23908740944318 0 1.1237125054200234 1.5228787452803376 1.024227503252014 0.0 + + [{I|L}V]YPEE{I|L}KPV{I|L};[{I|L}V]YPEE{I|L}KP{I|L}V;[EP]E{I|L}KVPY{I|L}[{I|L}V];[EP]E{I|L}KV{I|L}{M(Oxidation (M))|F}{I|L}[{I|L}V];[EP]E{I|L}KY[VP]{I|L}[{I|L}V];EEP{I|L}KVPY{I|L}[{I|L}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HA]KVPY{I|L}[{I|L}V];[{I|L}V]{[SA]|[TG]}[EP]VPY{I|L}[{I|L}V];[EP]E{I|L}YK[VP]{I|L}[{I|L}V];[EP]EY{I|L}K[VP]{I|L}[{I|L}V] 5.5344;4.9;4.1879;3.6497;3.1508;2.8126;2.8051;2.7841;2.533;2.3012 +;-;-;-;-;-;-;-;-;- + 1355 + 1 1.163 102018.1 1.0 11847 4987 16821 HBL1_DMSO_200M_050219_2,16836 HBL1_DMSO_200M_050219_2,16836,LVYPEELKPVL True True LVYPEELKPVL 89.044753 650.381396472454 4687553.0 16821.0 ENSG00000080345|ENST00000444746|RIF1;;nc|ENSG00000080345|Q5UIP0-2|RIF1 6.008028348286946 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16837 89.059 800.0 113940.0 25 0 10759.0 -1 MLDTGLPCF 9 105 351.8306605192333 0 351.8305541872978 PEAK CID FTMS 0 0 0 16821 129249.8828125 1.0 0 0.0 16 Carbamidomethyl (C) _MLDTGLPC(Carbamidomethyl (C))F_ ENSG00000241973|ENST00000255882|PI4KA;ENST00000360806.9_2_22:21827645-21842641:-|nuORF;ENST00000463608.5_1_22:21828989-21829627:-|nuORF;ENST00000466772.5_1_22:21063687-21064617:-|nuORF;ENST00000477296.5_1_22:21827645-21830331:-|nuORF;ENST00000486209.5_1_22:21827645-21829738:-|nuORF;ENST00000492581.5_1_22:21062337-21064665:-|nuORF;nc|ENSG00000183506|A4QPH2|PI4KAP2;nc|ENSG00000241973|P42356-2|PI4KA 4.897010918128616 0.3444685223463734 4 G 1 -1 1.1092 0.0 0.0 0.15809 0.0 0.0 368.4182352456947 273.1863802545532 641.6046155002479 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.15809 + + 5 + 1 1.163 79892.5 0.5 11848 4987 16821 HBL1_DMSO_200M_050219_2,16837 HBL1_DMSO_200M_050219_2,16837,MLDTGLPCF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16838 89.064 207.0 245470.0 25 0 42784.0 + 42082 VQWENSFVSV 10 80 597.7930277545798 1193.5715025759596 2 597.7921630740166 MULTI CID FTMS 0 0 0 16821 121822.859375 0.2916693944439236 -2 0.2229690551757812 17 Unmodified _VQWENSFVSV_ ENSG00000174231|ENST00000304992|PRPF8 45.69961567697781 0.105390671673896 4 N{I|L}[NS]{M(Oxidation (M))|F}VW 7 6 34.965 0.0 0.0 2.9295 0.0 0.0 315.1216297834 0.0 315.1216297834 0.0 8.248937378422198 0.0 0.0 0 0.7429928190999391 0.0 0.805462187404089 0.5 N{I|L}[NS]{M(Oxidation (M))|F}VW 2.9295 - 378 1 1.163 45457.0 1.0 11849 4987 16821 HBL1_DMSO_200M_050219_2,16838 HBL1_DMSO_200M_050219_2,16838,VQWENSFVSV True True VQWENSFVSV 89.063686 597.792163074017 3973844.75 16821.0 ENSG00000174231|ENST00000304992|PRPF8 4.249373435974121 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16840 89.069 48.0 859860.0 25 0 187820.0 -1 MLEPHSCQYI 10 59 647.2852836565492 1292.5560143798982 2 647.2855712771416 MULTI CID FTMS 0 0 0 16839 871141.0 0.7261603608541215 1 -0.1129989624023437 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LEPHSC(Carbamidomethyl (C))QYI_ ENSG00000068912|ENST00000185150|ERLEC1;nc|ENSG00000068912|Q96DZ1-2|ERLEC1;nc|ENSG00000068912|Q96DZ1-3|ERLEC1 18.1463463914782 0.5430639438673815 4 QY{M(Oxidation (M))|F}QY{I|L} 6 -1 48.448 0.0 0.0 3.7483 0.0 0.0 432.15043837715 0.0 432.15043837715 0.0 36.56418474327175 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 QY{M(Oxidation (M))|F}QY{I|L} 3.7483 - 277 1 1.169 38991.1 1.0 11850 4988 16839 HBL1_DMSO_200M_050219_2,16840 HBL1_DMSO_200M_050219_2,16840,MLEPHSCQYI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16841 89.071 105.0 455460.0 25 0 67731.0 + 13442 HLPVLVLS 8 64 439.2786665730287 876.5427802128573 2 439.2786437869072 MULTI CID FTMS 0 0 0 16839 483522.5625 0.483367975379374 2 -0.1789016723632812 2 Unmodified _HLPVLVLS_ REV__ENSG00000013563|ENST00000369807|DNASE1L1;REV__ENST00000497242.1_1_X:153631168-153631932:-|nuORF 38.99230528602208 0.2511498934509823 4 [H{I|L}]P{I|L}VVS{I|L} 8 -1 + 51.828 0.0 0.0 5.9127 5.9127 75.725 0.0 0.0 0.0 11.249387366083 10.172203223519531 10.172203223519531 2.2134030500787816 0 0.8182503180159344 1.3010299956639813 0.0 0.0 [H{I|L}]P{I|L}VVS{I|L};[H{I|L}]PVV{I|L}S{I|L};[H{I|L}]PV{I|L}VS{I|L};[H{I|L}]VPV{I|L}S{I|L};[H{I|L}]VP{I|L}VS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}VVS{I|L};[{I|L}V]HPV{I|L}S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VV{I|L}S{I|L};[{I|L}V]HP{I|L}VS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}VS{I|L} 5.9127;5.6602;5.5693;5.3168;5.2259;4.6294;4.3971;4.3768;4.3062;4.2859 -;-;-;-;-;-;-;-;-;- 196 1 1.169 45309.1 1.0 11851 4988 16839 HBL1_DMSO_200M_050219_2,16841 HBL1_DMSO_200M_050219_2,16841,HLPVLVLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16842 89.074 172.0 438820.0 25 0 70270.0 -1 ALMAAPLSL 9 91 451.75274496202985 901.4909369908596 2 451.7525817751884 MULTI CID FTMS 0 0 0 16839 467187.46875 0.0359722994122852 73 -7.296768188476562 3 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 60.824 0.0 0.0 6.7471 6.7471 83.339 0.0 0.0 0.0 9.911808461061398 8.384767769392738 8.384767769392738 4.771212547196626 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}ASP{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};{[TV]|[{I|L}S]}MASP{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 6.7471;6.2178;5.6886;5.6476;4.7795;4.6164;4.4718;4.2502;4.0871;3.9251 -;-;-;-;-;-;-;-;-;- 281 1 1.169 63704.7 1.0 11852 4988 16839 HBL1_DMSO_200M_050219_2,16842 HBL1_DMSO_200M_050219_2,16842,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16843 89.076 73.0 767290.0 25 0 73538.0 + 1261 AILMELERV 9 75 537.3041185625092 1072.5936841918185 2 537.3025390505791 MULTI CID FTMS 0 0 0 16839 390013.125 0.1084169592609881 5 -0.4224090576171875 4 Unmodified _AILMELERV_ ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR 24.99096001346401 0.2132109383330889 4 {I|L}A{I|L}ME{I|L}ERV 9 2 + 83.421 0.0 0.0 7.7775 7.7775 82.003 0.0 0.0 0.0 36.47817481888637 2.2581772633434127 2.2581772633434127 2.2581772633434127 0 0.8807196863200843 2.0 0.0 0.0 {I|L}A{I|L}ME{I|L}ERV;{I|L}A{I|L}ME{I|L}RD{I|L};{I|L}M{I|L}AE{I|L}ERV;{I|L}M{I|L}EA{I|L}ERV;{I|L}M{I|L}AE{I|L}RD{I|L};{I|L}M{I|L}EA{I|L}RD{I|L};[{M(Oxidation (M))|F}V][VG]{I|L}EA{I|L}[EP];[{M(Oxidation (M))|F}V][VG]{I|L}AE{I|L}[EP];{I|L}[{M(Oxidation (M))|F}V][TP]{I|L}ERV;[{M(Oxidation (M))|F}V]{I|L}[TP]{I|L}ERV 7.7775;7.567;7.0016;7.0016;6.7911;6.7911;2.6468;2.6468;2.1568;1.8761 -;-;-;-;-;-;-;-;-;- 235 + 1 1.169 52273.9 1.0 11853 4988 16839 HBL1_DMSO_200M_050219_2,16843 HBL1_DMSO_200M_050219_2,16843,AILMELERV False True AILMELERV 89.076081 537.302539050579 11567225.0 16839.0 nc|ENSG00000103429|Q9NZS9-2|BFAR;;ENSG00000103429|ENST00000261658|BFAR 4.538885275522868 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16844 89.08 220.0 309800.0 25 0 25742.0 + 41893 VQDELHSVLGL 11 94 605.3277492404558 1208.6409455477117 2 605.3271972537041 MULTI CID FTMS 0 0 0 16839 359036.6875 1.0 0 0.0 5 Unmodified _VQDELHSVLGL_ ENSG00000204560|ENST00000376442|DHX16 73.1962812333195 0.0231417158388345 4 {[QV]|[N{I|L}]|[RA]|[KV]}D{[QN]|[E{I|L}]|[KN]}HSV{I|L}G{I|L} 11 0 + 78.568 0.0 0.0 6.5005 6.5005 76.518 0.0 0.0 0.0 1.44235514371114 15.07062321345802 1.44235514371114 1.44235514371114 0 2.2302046884880937 1.154901959985743 0.9247425010840048 0.6989700043360187 + + {[QV]|[N{I|L}]|[RA]|[KV]}D{[QN]|[E{I|L}]|[KN]}HSV{I|L}G{I|L};{[VA]|[{I|L}G]}GD{[QN]|[E{I|L}]|[KN]}HSV{I|L}G{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}D[YV]{[CT]|[{M(Oxidation (M))|F}G]}V{I|L}G{I|L};[HS]{[QN]|[E{I|L}]|[KN]}DVQV{I|L}G{I|L};{[VA]|[{I|L}G]}GD[YV]{[CT]|[{M(Oxidation (M))|F}G]}V{I|L}G{I|L};[HS]{[QN]|[E{I|L}]|[KN]}DQVV{I|L}G{I|L};[HS]{[QN]|[E{I|L}]|[KN]}DV[AG]V{I|L}G{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}V{[QN]|[E{I|L}]|[KN]}HSV{I|L}G{I|L};[HS]{[QN]|[E{I|L}]|[KN]}DV{I|L}GG{I|L}G{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}D[YV][{M(Oxidation (M))|F}V]G{I|L}G{I|L} 6.5005;6.3812;5.2135;5.0662;4.805;4.4034;4.3109;4.2638;4.0798;4.0748 +;-;-;-;-;-;-;-;-;- + 1055 1 1.169 54417.6 1.0 11854 4988 16839 HBL1_DMSO_200M_050219_2,16844 HBL1_DMSO_200M_050219_2,16844,VQDELHSVLGL True True VQDELHSVLGL 89.080236 605.327197253704 3178523.0 16839.0 ENSG00000204560|ENST00000376442|DHX16 6.802894592285156 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16845 89.083 155.0 394730.0 25 0 61957.0 + 9557 FLHYIKLIRH 10 93 447.2728036924574 1338.7965816775722 3 447.2727233767509 MULTI CID FTMS 0 0 0 16839 318438.96875 0.520734701661785 -2 0.2065505981445312 6 Unmodified _FLHYIKLIRH_ REV__ENSG00000149311|ENST00000675843|ATM;REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF;REV__ENST00000533733.5_1_11:108158320-108160529:+|nuORF 3.2813086475875832 0.7114585191678878 4 {I|L} 1 -1 8.7724 0.0 0.0 0.65525 0.0 0.0 1207.7017921041331 0.0 1207.7017921041331 0.0 1.7827366175690609 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.65525 + + 14 + 1 1.169 61823.1 1.0 11855 4988 16839 HBL1_DMSO_200M_050219_2,16845 HBL1_DMSO_200M_050219_2,16845,FLHYIKLIRH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16846 89.09 356.0 520280.0 25 0 27938.0 -1 0 116 943.475313160726 1884.936073388252 2 943.4796020388604 MULTI CID FTMS 0 0 0 16839 304178.03125 0.988667048643547 2 -0.1789016723632812 7 4 [NP]N{I|L}{I|L}TR[YC(Carbamidomethyl (C))]NNP 12 -1 61.799 0.0 0.0 3.2786 0.0 0.0 0.0 425.2309838726948 425.2309838726948 16.18587346764295 0.0 0.0 0.0 0 0.4247425010840047 1.0457574905606752 0.4247425010840047 1.5044321917401078 [NP]N{I|L}{I|L}TR[YC(Carbamidomethyl (C))]NNP 3.2786 - 4431 1 1.169 120746.4 1.0 11856 4988 16839 HBL1_DMSO_200M_050219_2,16846 HBL1_DMSO_200M_050219_2,16846, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16847 89.095 278.0 416120.0 25 0 40215.0 39580 VCSILRIH 8 125 470.77172614517326 939.5288993571464 2 470.7719299197197 MULTI CID FTMS 0 0 0 16839 274367.40625 0.8537851492312852 -1 0.1058349609375 8 Unmodified _VCSILRIH_ ENSG00000236981|ENST00000375024|OR10G9 44.40701690623563 0.1655546087385432 4 {[DS]|[MA]|[CV]|TT}S{I|L}{I|L}{I|L}HR 8 2 {[DS]|[MA]|[CV]|TT}S + + 53.223 17.893 6.1889 5.6649 5.6649 55.334 0.0 0.0 0.0 0.0 35.33042247403873 0.0 0.0 0 1.25 0.0 0.0 0.5774509799928715 {[DS]|[MA]|[CV]|TT}S{I|L}{I|L}{I|L}HR 5.6649 - 256 + 1 1.169 93328.9 1.0 11857 4988 16839 HBL1_DMSO_200M_050219_2,16847 HBL1_DMSO_200M_050219_2,16847,VCSILRIH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16848 89.098 141.0 638760.0 25 0 49568.0 + 34916 SQIISLQTL 9 130 501.7954322394132 1001.5763115456264 2 501.7951537966728 MULTI CID FTMS 0 0 0 16839 271986.84375 0.1466743784541093 -3 0.3288040161132812 9 Unmodified _SQIISLQTL_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF 34.40172386719151 0.1061884637610825 4 {[QS]|[NT]}{I|L}TV 5 5 34.461 0.0 0.0 3.4407 0.0 0.0 0.0 470.262687848614 470.262687848614 2.896685466525198 0.0 0.0 0.0 0 0.0 0.5376020021010439 1.066901560044258 0.4604093769761876 {[QS]|[NT]}{I|L}TV 3.4407 - 919 1 1.169 73612.9 1.0 11858 4988 16839 HBL1_DMSO_200M_050219_2,16848 HBL1_DMSO_200M_050219_2,16848,SQIISLQTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16849 89.101 185.0 483310.0 25 0 91121.0 + 20261 LLDPSVFHV 9 104 513.7845222234655 1025.554491513731 2 513.7847167849541 MULTI CID FTMS 0 0 0 16839 253400.4375 0.4338044857343581 -2 0.2065505981445312 10 Unmodified _LLDPSVFHV_ ENSG00000184967|ENST00000330579|NOC4L;ENST00000538784.2_1_12:132635515-132636943:+|nuORF 44.40701690623563 0.0526327925666318 4 {I|L}{I|L}DPSV{M(Oxidation (M))|F}HV 9 0 + 71.436 0.0 0.0 6.9656 6.9656 91.137 0.0 0.0 0.0 41.08181629278469 9.665762445130497 9.665762445130497 11.70941280735775 0 0.8807196863200843 2.0 0.4247425010840047 0.0 + + {I|L}{I|L}DPSV{M(Oxidation (M))|F}HV;{I|L}{I|L}DV[PS]{M(Oxidation (M))|F}HV;{I|L}{I|L}D[{I|L}T]SEHV;{I|L}{I|L}DPS[WK][PA];[KA]AAPSV{M(Oxidation (M))|F}HV;{I|L}{I|L}DP{[QC]|[C(Carbamidomethyl (C))A]}[KP]{I|L};{I|L}{I|L}DV{[WN]|[YH]}[PG]{I|L};{I|L}{I|L}[MT]H{M(Oxidation (M))|F}P[PA];{I|L}{I|L}DV{[WN]|[YH]}V[PA];{I|L}{I|L}DV{[WN]|[YH]}[PA]V 6.9656;5.8239;4.0385;3.9167;3.4528;3.4166;2.9221;2.5497;2.4776;2.4569 +;-;-;-;-;-;-;-;-;- + 960 + 1 1.169 71777.5 1.0 11859 4988 16839 HBL1_DMSO_200M_050219_2,16849 HBL1_DMSO_200M_050219_2,16849,LLDPSVFHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16850 89.108 348.0 329870.0 25 0 33989.0 + 22104 LPPPVFQM 8 110 464.75067886505946 927.4868047969188 2 464.7513915896416 MULTI CID FTMS 0 0 0 16839 247336.3125 0.8882067066728943 3 -0.2882156372070312 11 Unmodified _LPPPVFQM_ ENSG00000173726|ENST00000366607|TOMM20;ENST00000534518.1_1_11:77024925-77025045:+|nuORF 56.04830969593885 0.114297258605095 4 [{I|L}P]PPV{M(Oxidation (M))|F}QM 8 0 + 47.445 0.0 0.0 5.1154 5.1154 75.639 0.0 0.0 0.0 8.756636139608858 10.172203223519531 8.756636139608858 3.979400086720375 0 1.1069758080123702 1.6989700043360187 0.0 0.0 + + [{I|L}P]PPV{M(Oxidation (M))|F}QM;[{I|L}P]PVP{M(Oxidation (M))|F}QM;[{I|L}P]{[ET]|[MV]}P{I|L}QM;[{I|L}P]PVM{I|L}QM;[VP]PP{I|L}{M(Oxidation (M))|F}QM;[{I|L}P]{[ET]|[MV]}{I|L}PQM;[{I|L}P]PV{M(Oxidation (M))|F}PQM;[VP]P{M(Oxidation (M))|F}P{I|L}QM;[VP]PP{M(Oxidation (M))|F}{I|L}QM;[{I|L}P][YN]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.1154;4.6864;4.4965;4.3618;4.1713;3.9821;3.8474;3.8467;3.8467;3.719 +;-;-;-;-;-;-;-;-;- + 537 1 1.169 94579.8 1.0 11860 4988 16839 HBL1_DMSO_200M_050219_2,16850 HBL1_DMSO_200M_050219_2,16850,LPPPVFQM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16851 89.11 127.0 362530.0 25 0 23374.0 + 45088 YPYPGELTMM 10 89 601.2677942267209 1200.5210355202416 2 601.2669555544853 MULTI CID FTMS 0 0 0 16839 230650.046875 0.7544095714979444 -2 0.2065505981445312 12 Unmodified _YPYPGELTMM_ ENSG00000057657|ENST00000369096|PRDM1;ENST00000481163.1_1_6:106546960-106547465:+|nuORF;nc|ENSG00000057657|O75626-2|PRDM1;nc|ENSG00000057657|O75626-3|PRDM1;PRDM1|p.G287Vfs*25|1|0.38|ENSG00000057657|chr6:106105016-106105017|-/GT|frameshift_variant 20.453626601364224 0.5043500229302764 4 D{I|L}T[SG] 5 8 22.218 0.0 0.0 1.8507 0.0 0.0 709.3180409162125 0.0 709.3180409162125 0.0 -2.222991237112062 -2.222991237112062 0.0 0 0.0 0.0 0.0 0.0 D{I|L}T[SG] 1.8507 - 130 1 1.169 39574.9 1.0 11861 4988 16839 HBL1_DMSO_200M_050219_2,16851 HBL1_DMSO_200M_050219_2,16851,YPYPGELTMM False True YPYPGELTMM 89.110162 601.266955554485 3310780.75 16839.0 nc|ENSG00000057657|O75626-2|PRDM1;;PRDM1|p.G287Vfs*25|1|0.38|ENSG00000057657|chr6:106105016-106105017|-/GT|frameshift_variant;;ENSG00000057657|ENST00000369096|PRDM1;;nc|ENSG00000057657|O75626-3|PRDM1;;ENST00000481163.1_1_6:106546960-106547465:+|nuORF 4.466459274291992 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16852 89.114 225.0 279290.0 25 0 30353.0 + -1 MALKLDPIE 9 109 523.2822543578286 1044.5499557824571 2 523.2832519412041 MULTI CID FTMS 0 0 0 16839 193482.46875 0.7237500241096525 2 -0.1789016723632812 13 Oxidation (M) _M(Oxidation (M))ALKLDPIE_ REV__ENSG00000104885|ENST00000398665|DOT1L;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L 29.081581746732265 0.1611639662936252 4 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}P{M(Oxidation (M))|F}{I|L}[QP]{I|L} 9 -1 + 48.343 0.0 0.0 4.6281 4.6281 81.81 0.0 0.0 0.0 15.691446804494902 17.759621790487685 15.691446804494902 11.73393743112328 0 0.8494850021680094 1.6989700043360187 0.0 0.3807196863200844 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}P{M(Oxidation (M))|F}{I|L}[QP]{I|L};W{I|L}E{M(Oxidation (M))|F}{I|L}[QP]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}P{M(Oxidation (M))|F}{I|L}AAPV;[VS]{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}P{[CP]|[EA]}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}P{M(Oxidation (M))|F}[RV]PV;[{I|L}T]AA{I|L}{M(Oxidation (M))|F}P{[CP]|[EA]}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}P{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}[PA];[VS]{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H]{I|L};[{I|L}T][RV]{M(Oxidation (M))|F}P{[CP]|[EA]}{I|L};[{I|L}T]AA{I|L}{M(Oxidation (M))|F}P{I|L}{[CP]|[EA]} 4.6281;3.5048;2.7635;2.7263;2.4264;2.3833;2.3825;2.3128;2.0462;2.0231 -;-;-;-;-;-;-;-;-;- 440 + 1 1.169 57249.1 1.0 11862 4988 16839 HBL1_DMSO_200M_050219_2,16852 HBL1_DMSO_200M_050219_2,16852,MALKLDPIE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16853 89.121 370.0 233000.0 25 0 23431.0 27887 PLSLPELT 8 107 435.2523273977084 868.4901018622169 2 435.2522155642509 MULTI CID FTMS 0 0 0 16839 158835.984375 0.477957179036486 -5 0.5376739501953125 14 Unmodified _PLSLPELT_ ENSG00000082516|ENST00000285873|GEMIN5;REV__ENSG00000114473|ENST00000265239|IQCG;REV__ENST00000463651.1_1_3:197670645-197672498:-|nuORF;REV__ENST00000480302.5_1_3:197665562-197672498:-|nuORF 40.44857923139169 0.2267865117615937 4 SWT{I|L} 4 6 22.638 0.0 0.0 2.6066 0.0 0.0 363.2358732018637 0.0 363.2358732018637 0.0 11.378990333319017 0.0 0.0 0 0.4247425010840047 0.0 0.5994850021680094 0.0 SWT{I|L} 2.6066 - 221 + 1 1.169 71245.1 1.0 11863 4988 16839 HBL1_DMSO_200M_050219_2,16853 HBL1_DMSO_200M_050219_2,16853,PLSLPELT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16854 89.136 800.0 187350.0 25 0 22987.0 + -1 VYLYGEMTW 9 152 589.2666878397516 1176.5188227463032 2 589.2676269412041 MULTI CID FTMS 0 0 0 16839 142997.609375 0.5430913260836076 1 -0.1129989624023437 15 Oxidation (M) _VYLYGEM(Oxidation (M))TW_ REV__ENSG00000165895|ENST00000298815|ARHGAP42 30.22481116460888 0.1466181017706357 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVEV 6 -1 43.109 0.0 0.0 3.6641 0.0 0.0 0.0 449.1526477797594 449.1526477797594 18.95242492728684 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YVEV 3.6641 - 1244 1 1.169 113990.6 0.7200000286102295 11864 4988 16839 HBL1_DMSO_200M_050219_2,16854 HBL1_DMSO_200M_050219_2,16854,VYLYGEMTW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16855 89.14 235.0 196030.0 25 0 26428.0 + 19584 LFVYTGWCL 9 86 551.2731422276613 1100.5317315221223 2 551.2734252810478 MULTI CID FTMS 0 0 0 16839 144393.921875 0.4066672275944059 2 -0.1789016723632812 16 Unmodified _LFVYTGWCL_ REV__ENST00000251127.10_1_13:101720348-101721141:-|nuORF 18.13498045792455 0.3457906370836843 4 CH[HQ]Y{I|L}C{I|L} 8 -1 44.373 0.0 0.0 4.032 0.0 0.0 85.08986098457187 0.0 85.08986098457187 0.0 25.71115590329043 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 CH[HQ]Y{I|L}C{I|L} 4.032 - 154 1 1.169 43016.4 1.0 11865 4988 16839 HBL1_DMSO_200M_050219_2,16855 HBL1_DMSO_200M_050219_2,16855,LFVYTGWCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16856 89.154 800.0 217970.0 25 0 18997.0 + + 2337 AQIDELKLQL 10 173 585.8403875925713 1169.6662222519426 2 585.8403808474541 MULTI CID FTMS 0 0 0 16839 134148.203125 1.0 0 0.0 17 Unmodified _AQLEDLKLQL_ nc|ENSG00000133026|P35580-3|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580|MYH10;ENSG00000133026|ENST00000360416|MYH10;ENST00000465458.1_1_17:8409499-8413222:-|nuORF 100.0907132914201 0.0086105052902417 4 [QA]{I|L}ED{I|L}K{I|L}Q{I|L} 10 -1 + 73.399 0.0 0.0 6.2752 6.2752 76.813 0.0 0.0 0.0 9.97289981002382 13.244914976864514 9.97289981002382 1.9897000433601733 0 1.7059771852360797 0.7958800173440752 0.7302046884880937 1.394599018282542 [QA]{I|L}ED{I|L}K{I|L}Q{I|L};[QA]{I|L}DE{I|L}K{I|L}Q{I|L};[QA]{I|L}{[SA]|[TG]}K{I|L}QA[Q{I|L}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}K{I|L}QA[Q{I|L}];[QA]{I|L}ED{I|L}K{I|L}[AG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}K{I|L}{I|L}QA[Q{I|L}];[QA]{I|L}DE{I|L}K{I|L}[AG]{I|L};[QA]{I|L}{[SA]|[TG]}KQ{I|L}A[Q{I|L}];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}KQ{I|L}A[Q{I|L}];{NN|[MP]|[D{I|L}]|[EV]}E{I|L}K{I|L}QA[Q{I|L}] 6.2752;6.1051;5.1042;5.0339;5.0256;4.8834;4.8555;4.7992;4.7289;4.6756 +;-;-;-;-;-;-;-;-;- + 4090 + 1 1.169 130684.2 0.6700000166893005 11866 4988 16839 HBL1_DMSO_200M_050219_2,16856 HBL1_DMSO_200M_050219_2,16856,AQLEDLKLQL False False AQIDELKLQL 89.154287 585.840380847454 1153227.375 16839.0 nc|ENSG00000133026|P35580-3|MYH10;;nc|ENSG00000133026|P35580-5|MYH10;;nc|ENSG00000133026|P35580-2|MYH10;;nc|ENSG00000133026|P35580|MYH10;;ENSG00000133026|ENST00000360416|MYH10;;ENST00000465458.1_1_17:8409499-8413222:-|nuORF 4.652411460876465 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16857 89.157 145.0 470530.0 25 0 59138.0 + 32491 SALEELVNV 9 101 487.2632995854641 972.5120462377282 2 487.2632324099541 MULTI CID FTMS 0 0 0 16839 136109.90625 0.1595188252721368 -3 0.3288040161132812 18 Unmodified _SALEELVNV_ ENSG00000162408|ENST00000377705|NOL9 67.34385681178166 0.0221257235307089 4 {[SA]|[TG]}{I|L}EE{I|L} 6 3 43.567 0.0 0.0 4.4798 0.0 0.0 0.0 327.1658546527729 327.1658546527729 18.460696996448576 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.548455006504028 0.0 + {[SA]|[TG]}{I|L}EE{I|L} 4.4798 + + 333 1 1.169 58201.2 1.0 11867 4988 16839 HBL1_DMSO_200M_050219_2,16857 HBL1_DMSO_200M_050219_2,16857,SALEELVNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16858 89.172 800.0 173820.0 25 0 20712.0 + 30828 RIIPDVADLKI 11 110 626.8854245016502 1251.7562960701002 2 626.8851196169853 MULTI CID FTMS 0 0 0 16839 129198.3203125 1.0 0 0.0 19 Unmodified _RIIPDVADLKI_ ENSG00000132294|ENST00000254624|EFR3A;nc|ENSG00000132294|Q14156-2|EFR3A;nc|ENSG00000132294|Q14156-3|EFR3A 51.76506608216692 0.1078551230621665 4 [R{I|L}]{I|L}[DP]VAD{I|L}K{I|L} 11 0 + 64.606 0.0 0.0 5.1612 5.1612 79.043 0.0 0.0 0.0 10.026301296056944 51.50721894467311 10.026301296056944 6.575773191777927 0 1.4876954943324543 0.0 0.3494850021680094 0.805462187404089 + + [R{I|L}]{I|L}[DP]VAD{I|L}K{I|L};[R{I|L}]{I|L}[DP]VW{I|L}K{I|L};[R{I|L}]{I|L}[EP]RD{I|L}K{I|L};[R{I|L}]{I|L}[EP][VG]D{I|L}K{I|L};[R{I|L}]{I|L}[EP]KA{[QG]|[NA]}K{I|L};[R{I|L}]{I|L}[EP]KQQK{I|L};[R{I|L}]{I|L}[DP]VA{[TV]|[{I|L}S]}R{I|L};[R{I|L}]{I|L}[DP]V[RD]R{I|L};[R{I|L}]{I|L}[EP]R{[TV]|[{I|L}S]}R{I|L};[R{I|L}]{I|L}[EP]K{NN|[MP]|[D{I|L}]|[EV]}R{I|L} 5.1612;4.6359;4.4088;3.6767;2.3764;2.0915;2.062;1.5367;1.3096;0.9284 +;-;-;-;-;-;-;-;-;- + 266 1 1.169 111879.1 0.6499999761581421 11868 4988 16839 HBL1_DMSO_200M_050219_2,16858 HBL1_DMSO_200M_050219_2,16858,RIIPDVADLKI True True RIIPDVADLKI 89.1722 626.885119616985 918682.9375 16839.0 nc|ENSG00000132294|Q14156-2|EFR3A;;nc|ENSG00000132294|Q14156-3|EFR3A;;ENSG00000132294|ENST00000254624|EFR3A 3.590410153071085 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16859 89.177 231.0 527200.0 25 0 29631.0 + -1 EVTISCTCYVL 11 108 672.8102759073729 1343.6059988815457 2 673.3114501833916 MULTI CID FTMS 0 0 0 16839 128622.484375 0.1398778043567418 -2 0.2065505981445312 20 2 Carbamidomethyl (C) _EVTISC(Carbamidomethyl (C))TC(Carbamidomethyl (C))YVL_ REV__ENSG00000111641|ENST00000322166|NOP2;REV__nc|ENSG00000111641|P46087-2|NOP2;REV__nc|ENSG00000111641|P46087-3|NOP2;REV__nc|ENSG00000111641|P46087-4|NOP2 13.042465956692816 0.7638483625850725 4 [DV]PEVAGA 8 -1 40.119 0.0 0.0 2.9859 0.0 0.0 0.0 602.2271918774526 602.2271918774526 20.29799110992478 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.0 [DV]PEVAGA 2.9859 - 1957 1 1.169 94141.4 1.0 11869 4988 16839 HBL1_DMSO_200M_050219_2,16859 HBL1_DMSO_200M_050219_2,16859,EVTISCTCYVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16861 89.181 3.3 12188000.0 25 0 915670.0 + 25073 MPVIPMNTI 9 61 508.2689851400359 1014.5234173468718 2 508.2702209353447 MULTI CID FTMS 0 0 0 16860 13426708.0 0.7613376972138302 1 -0.0659027099609375 1 Unmodified _MPVIPMNTI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 49.66892048692302 0.0410958345688192 4 [VP]M{I|L}PMN[{I|L}T] 9 2 + 51.833 0.0 0.0 5.1091 5.1091 76.765 0.0 0.0 0.0 9.675390846596486 7.147642715192504 7.147642715192504 4.771212547196626 0 0.5 1.0969100130080565 0.0 0.0 [VP]M{I|L}PMN[{I|L}T];[VP]{I|L}MPMN[{I|L}T];[VP]MP{I|L}MN[{I|L}T];[VP]M{I|L}PMGG[{I|L}T];{NN|[MP]|[D{I|L}]|[EV]}V{I|L}PMN[{I|L}T];[VP]{I|L}PMMN[{I|L}T];[VP]{I|L}MPMGG[{I|L}T];[VP]MP{I|L}MGG[{I|L}T];{NN|[MP]|[D{I|L}]|[EV]}VP{I|L}MN[{I|L}T];[VP]SC(Carbamidomethyl (C))[KP]N[{I|L}T] 5.1091;4.6388;4.3421;4.2014;4.1554;3.9498;3.7311;3.4344;3.3884;3.2582 -;-;-;-;+;-;-;-;-;- + 260 1 1.182 38548.0 1.0 11870 4989 16860 HBL1_DMSO_200M_050219_2,16861 HBL1_DMSO_200M_050219_2,16861,MPVIPMNTI True True MPVIPMNTI 89.181327 508.270220935345 525510384.0 16860.0 nc|ENSG00000147162|O15294-3|OGT;;ENSG00000147162|ENST00000373719|OGT;;nc|ENSG00000147162|O15294-4|OGT;;nc|ENSG00000147162|O15294-2|OGT 7.958944638570149 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16862 89.183 11.0 4808800.0 25 0 711070.0 + 9193 FGGVLILIHR 10 67 375.5693297980315 1123.6861599942945 3 375.5695678591728 MULTI CID FTMS 0 0 0 16860 3716482.25 0.1298536823451746 3 -0.264739990234375 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 30.63653989081413 0.2803493085145199 4 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 85.367 0.0 0.0 7.597 7.597 91.005 0.0 0.0 0.0 71.65668775632469 18.22559982972642 18.22559982972642 9.208187539523747 0 0.75 2.0 0.0 0.3252574989159953 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 7.597;6.7776 -;- 95 + 1 1.182 53088.2 1.0 11871 4989 16860 HBL1_DMSO_200M_050219_2,16862 HBL1_DMSO_200M_050219_2,16862,FGGVLILIHR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16863 89.184 26.0 2302600.0 25 0 196950.0 + 29870 QQVQRLPFL 9 84 564.8298166012579 1127.6450802693157 2 564.8300048708916 MULTI CID FTMS 0 0 0 16860 1806196.25 0.5972090618777424 -2 0.2188339233398437 3 Unmodified _QQVQRLPFL_ ENSG00000132963|ENST00000380842|POMP 117.59872219059416 0.0024691254995583 4 QQVQR{I|L}P{M(Oxidation (M))|F}{I|L} 9 0 + 57.247 0.0 0.0 5.0767 5.0767 81.8 0.0 0.0 0.0 46.278128284054105 9.32303356178899 9.32303356178899 9.208187539523747 0 1.860924374808178 0.0 0.0 0.3054621874040891 + + QQVQR{I|L}P{M(Oxidation (M))|F}{I|L};QQV[AG]R{I|L}P{M(Oxidation (M))|F}{I|L};[AG]V[R{I|L}][Y{I|L}]V[HT];{[QV]|[N{I|L}]|[RA]|[KV]}[R{I|L}][Y{I|L}]V[HT] 5.0767;4.2601;0.99139;0.078018 +;-;-;- + 180 + 1 1.182 52869.4 1.0 11872 4989 16860 HBL1_DMSO_200M_050219_2,16863 HBL1_DMSO_200M_050219_2,16863,QQVQRLPFL True True QQVQRLPFL 89.183683 564.830004870892 79359640.0 16860.0 ENSG00000132963|ENST00000380842|POMP 8.756043752034506 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16864 89.185 34.0 1572700.0 25 0 137410.0 + 17282 KLQEFLQTL 9 85 560.3251248979374 1118.6356968626746 2 560.3251830935478 MULTI CID FTMS 0 0 0 16860 1338039.5 0.7224153172901668 1 -0.0659027099609375 4 Unmodified _KLQEFLQTL_ ENSG00000140525|ENST00000310775|FANCI;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-4|FANCI 81.89019881105858 0.0170587746866453 4 [{I|L}T][CS]{I|L}K{I|L}QT{I|L} 10 5 + 69.997 0.0 0.0 6.2573 6.2573 74.874 0.0 0.0 0.0 6.300887149282062 10.012262311882765 6.300887149282062 1.0475750727131583 0 0.7742275032520141 1.3979400086720375 0.7302046884880937 1.1307196863200843 [{I|L}T][CS]{I|L}K{I|L}QT{I|L};[{I|L}T]Q[R{M(Oxidation (M))|F}]{I|L}QT{I|L};[AG]E{M(Oxidation (M))|F}{I|L}K{I|L}QT{I|L};[AG]{I|L}{M(Oxidation (M))|F}EK{I|L}QT{I|L};[{I|L}T][CS]{I|L}K{I|L}[AG]T{I|L};[AG]{I|L}E{M(Oxidation (M))|F}K{I|L}QT{I|L};[{I|L}T]Q[R{M(Oxidation (M))|F}]{I|L}[AG]T{I|L};[{I|L}T]Q{I|L}[R{M(Oxidation (M))|F}]QT{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}K{I|L}QT{I|L};[{M(Oxidation (M))|F}E]Q{I|L}K{I|L}QT{I|L} 6.2573;6.1637;5.6941;5.6472;5.4381;5.3792;5.3405;5.313;5.2926;5.2469 -;-;-;-;-;-;-;-;-;- 1046 1 1.182 46587.0 1.0 11873 4989 16860 HBL1_DMSO_200M_050219_2,16864 HBL1_DMSO_200M_050219_2,16864,KLQEFLQTL True True KLQEFLQTL 89.184862 560.325183093548 13236103.0 16860.0 nc|ENSG00000140525|Q9NVI1-1|FANCI;;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;;ENSG00000140525|ENST00000310775|FANCI;;nc|ENSG00000140525|Q9NVI1-4|FANCI;;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;;nc|ENSG00000140525|Q9NVI1-2|FANCI 5.668285528818767 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16865 89.186 35.0 664930.0 25 0 63913.0 10023 FPLTAAQKIA 10 50 530.3138787056866 1058.6132044781732 2 530.3138915896416 MULTI CID FTMS 0 0 0 16860 938013.125 0.6058686568764484 -2 0.2188339233398437 5 Unmodified _FPLTAAQKIA_ ENST00000497389.6_1_10:46918355-46938364:+|nuORF 15.248480904072842 0.5916873121453583 4 AT{I|L}PE 5 9 36.938 0.0 0.0 3.4893 0.0 0.0 529.3221913068375 0.0 529.3221913068375 0.0 29.948500216800937 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 AT{I|L}PE 3.4893 - 16 1 1.182 26228.6 1.0 11874 4989 16860 HBL1_DMSO_200M_050219_2,16865 HBL1_DMSO_200M_050219_2,16865,FPLTAAQKIA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16866 89.188 67.0 452770.0 25 0 27299.0 + 45530 YTVEDLATQL 10 62 576.7920957725261 1151.569638611852 2 576.7924072146416 MULTI CID FTMS 0 0 0 16860 683788.5625 0.1765749598161296 -2 0.2188339233398437 6 Unmodified _YTVEDLATQL_ ENSG00000124571|ENST00000265351|XPO5 43.85829265575387 0.1168243637355526 4 {NN|[MP]|[D{I|L}]|[EV]}DTY{I|L} 6 5 26.001 0.0 0.0 2.2578 0.0 0.0 0.0 428.2117644265583 428.2117644265583 6.615103821334532 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.5 0.0 {NN|[MP]|[D{I|L}]|[EV]}DTY{I|L} 2.2578 - 171 1 1.182 30517.0 1.0 11875 4989 16860 HBL1_DMSO_200M_050219_2,16866 HBL1_DMSO_200M_050219_2,16866,YTVEDLATQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16867 89.189 63.0 1459400.0 25 0 122190.0 28699 PVSCSWFL 8 113 498.2380207967248 994.4614886602496 2 498.2382690310478 MULTI CID FTMS 0 0 0 16860 604255.0625 0.3143838648158106 -5 0.5518569946289062 7 Carbamidomethyl (C) _PVSC(Carbamidomethyl (C))SWFL_ ENSG00000163357|ENST00000295542|DCST1;nc|ENSG00000163357|Q5T197-2|DCST1;nc|ENSG00000163357|Q5T197-3|DCST1 42.96799951952854 0.1846367511955703 4 [VP]SC(Carbamidomethyl (C)){I|L}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 8 3 + 38.862 0.0 0.0 3.9078 3.9078 64.656 0.0 0.0 0.0 9.210757592379082 0.5237875363565792 0.5237875363565792 0.5237875363565792 0 0.0 1.3010299956639813 0.9476212463643424 0.0 [VP]SC(Carbamidomethyl (C)){I|L}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[VP]SC(Carbamidomethyl (C)){I|L}C(Carbamidomethyl (C)){[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[VP]M[QT]{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[TV]|[{I|L}S]}QMP{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[VP]S[CG]{I|L}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[{I|L}T]NMP{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[VP]M[QT]C(Carbamidomethyl (C)){[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}QMPC(Carbamidomethyl (C)){[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[VP]SC(Carbamidomethyl (C)){I|L}[CG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[VP]S[CG]{I|L}C(Carbamidomethyl (C)){[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.9078;3.8551;2.9876;2.9816;2.9764;2.935;2.9349;2.9289;2.9238;2.9238 -;-;-;-;-;-;-;-;-;- 573 1 1.182 72783.3 1.0 11876 4989 16860 HBL1_DMSO_200M_050219_2,16867 HBL1_DMSO_200M_050219_2,16867,PVSCSWFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16868 89.203 800.0 173980.0 25 0 39749.0 38088 TPKIQKLLNRE 11 129 670.4056825428676 1338.796812152535 2 670.4056274294853 MULTI CID FTMS 0 0 0 16860 164844.359375 0.9802845527888714 -1 0.1129989624023437 8 Unmodified _TPKIQKLLNRE_ ENSG00000141428|ENST00000592875|C18orf21 2.735195868890462 0.8622431031272658 4 {I|L} 1 10 10.485 0.0 0.0 0.78313 0.0 0.0 1207.7019005087834 0.0 1207.7019005087834 0.0 3.406206186877938 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.78313 + + 206 + 1 1.182 119024.0 0.7699999809265137 11877 4989 16860 HBL1_DMSO_200M_050219_2,16868 HBL1_DMSO_200M_050219_2,16868,TPKIQKLLNRE False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16869 89.207 194.0 303160.0 25 0 51325.0 + 31609 RQWADTFIV 9 80 568.2976476350179 1134.5807423368358 2 568.2993652224541 MULTI CID FTMS 0 0 0 16860 160373.3125 0.3681473178657704 -2 0.2188339233398437 9 Unmodified _RQWADTFIV_ ENSG00000105875|ENST00000354475|WDR91;ENST00000466182.5_1_7:134882699-134896254:-|nuORF;nc|ENSG00000105875|A4D1P6-2|WDR91;nc|ENSG00000105875|A4D1P6-3|WDR91 27.628801355627647 0.1796483985696185 4 DT{M(Oxidation (M))|F}{I|L}V 5 4 50.177 0.0 0.0 4.4225 0.0 0.0 541.2765980451187 0.0 541.2765980451187 0.0 36.197887582883936 0.0 0.0 0 0.6861818737241735 0.0 0.7742275032520141 0.0 + DT{M(Oxidation (M))|F}{I|L}V 4.4225 + + 73 1 1.182 50705.9 1.0 11878 4989 16860 HBL1_DMSO_200M_050219_2,16869 HBL1_DMSO_200M_050219_2,16869,RQWADTFIV False True RQWADTFIV 89.206741 568.299365222454 7568974.0 16860.0 ENSG00000105875|ENST00000354475|WDR91;;nc|ENSG00000105875|A4D1P6-3|WDR91;;nc|ENSG00000105875|A4D1P6-2|WDR91;;ENST00000466182.5_1_7:134882699-134896254:-|nuORF 6.066935857137044 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16870 89.221 800.0 202570.0 25 0 85408.0 -1 0 114 1023.8463425617388 3068.517198285416 3 1024.181445300579 MULTI CID FTMS 0 0 0 16860 150006.34375 0.7949382131422404 -1 0.1129989624023437 10 4 {[QV]|[N{I|L}]|[RA]|[KV]}PNCV[VS]VHVS 12 -1 30.447 0.0 0.0 0.99223 0.0 0.0 0.0 1816.9128031040284 1816.9128031040284 8.228138560234441 0.0 0.0 0.0 0 0.5 0.0 0.0 1.086696871556164 {[QV]|[N{I|L}]|[RA]|[KV]}PNCV[VS]VHVS 0.99223 - 4890 1 1.182 113685.5 0.7099999785423279 11879 4989 16860 HBL1_DMSO_200M_050219_2,16870 HBL1_DMSO_200M_050219_2,16870, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16871 89.224 195.0 225010.0 25 0 32481.0 + -1 LTMGMTPPTI 10 78 547.2663040776981 1092.5180552221962 2 548.7628051638603 MULTI CID FTMS 0 0 0 16860 140503.453125 0.3855097593907174 3 -0.264739990234375 11 2 Oxidation (M) _LTM(Oxidation (M))GM(Oxidation (M))TPPTI_ REV__ENST00000595465.6_1_19:15512376-15521402:-|nuORF 10.823927491677226 0.6659270209832991 4 T{I|L} 2 -1 21.454 0.0 0.0 1.9637 0.0 0.0 860.3756582268821 0.0 860.3756582268821 0.0 7.156818820794937 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 T{I|L} 1.9637 + + 71 + 1 1.182 41414.3 1.0 11880 4989 16860 HBL1_DMSO_200M_050219_2,16871 HBL1_DMSO_200M_050219_2,16871,LTMGMTPPTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16872 89.238 800.0 139170.0 25 0 9032.5 + 10774 FYPELKLAY 9 144 572.3075558243188 1142.6005587154375 2 572.3083373904228 MULTI CID FTMS 0 0 0 16860 115566.828125 0.1866756016554446 3 -0.264739990234375 12 Unmodified _FYPELKLAY_ ENSG00000157349|ENST00000288071|DDX19B;ENSG00000168872|ENST00000302243|DDX19A;ENST00000562140.2_1_16:70398455-70404584:+|nuORF;ENST00000566574.5_1_16:70398922-70399087:+|nuORF;ENST00000567012.5_1_16:70398922-70400166:+|nuORF;ENST00000569319.5_1_16:70395351-70399888:+|nuORF;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;nc|ENSG00000168872|Q9NUU7-2|DDX19A;nc|ENSG00000260537|Q9UMR2-2|DDX19B;nc|ENSG00000260537|Q9UMR2-3|DDX19B;nc|ENSG00000260537|Q9UMR2-4|DDX19B 19.256988751693697 0.3154191944385105 4 [EP]{I|L}K{I|L}A 6 3 36.348 0.0 0.0 3.1812 0.0 0.0 0.0 488.18158401814463 488.18158401814463 5.000904591727107 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3494850021680094 0.0 + [EP]{I|L}K{I|L}A 3.1812 + + 704 1 1.182 88940.0 0.6399999856948853 11881 4989 16860 HBL1_DMSO_200M_050219_2,16872 HBL1_DMSO_200M_050219_2,16872,FYPELKLAY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16873 89.242 225.0 302340.0 25 0 32962.0 + 9695 FLSDGTIISV 10 97 526.2870699953864 1050.5595870575728 2 526.2869140505791 MULTI CID FTMS 0 0 0 16860 113334.09375 0.7212167348470431 1 -0.0659027099609375 13 Unmodified _FLSDGTIISV_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 26.88365393820708 0.3646707531412818 4 SV 2 8 16.682 0.0 0.0 1.588 0.0 0.0 846.4481348864775 0.0 846.4481348864775 0.0 3.9182278046353134 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + SV 1.588 + + 118 + 1 1.182 60346.1 1.0 11882 4989 16860 HBL1_DMSO_200M_050219_2,16873 HBL1_DMSO_200M_050219_2,16873,FLSDGTIISV False True FLSDGTIISV 89.24243 524.2646 1481180.875 16860.0 nc|ENSG00000141076|Q969X6-3|UTP4;;ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 3.508249600728353 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16875 89.248 87.0 842760.0 25 0 55089.0 -1 MPVMNLAVF 9 104 519.2597261322937 1036.5048993313874 2 519.2604858279228 MULTI CID FTMS 0 0 0 16874 342728.375 0.5570465244462757 3 -0.2435073852539062 1 Oxidation (M) _MPVM(Oxidation (M))NLAVF_ ENST00000540918.2_1_18:21710325-21710370:+|nuORF 16.942295170755138 0.3780752226737986 4 MPV{I|L}{I|L} 5 -1 54.464 0.0 0.0 5.2546 0.0 0.0 0.0 480.15302454166255 480.15302454166255 30.51152522447381 0.0 0.0 0.0 0 0.6989700043360187 1.3010299956639813 0.0 0.0 MPV{I|L}{I|L} 5.2546 - 147 + 1 1.194 63573.7 1.0 11883 4990 16874 HBL1_DMSO_200M_050219_2,16875 HBL1_DMSO_200M_050219_2,16875,MPVMNLAVF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16876 89.252 168.0 447040.0 25 0 106800.0 + 26952 PEALPVLL 8 87 426.26472362634 850.51489431948 2 426.2652160525322 MULTI CID FTMS 0 0 0 16874 343160.5 0.984900825903692 1 -0.10931396484375 2 Unmodified _PEALPVLL_ REV__ENSG00000197324|ENST00000359591|LRP10 23.1484247019978 0.5573009939494978 4 {[HG]|PP}EA{I|L}V{I|L}{I|L} 8 -1 + 32.044 0.0 0.0 3.7676 3.7676 64.098 0.0 0.0 0.0 0.5102999566398125 9.018637558036673 0.5102999566398125 0.5102999566398125 0 0.7429928190999391 0.0 0.0 0.0 {[HG]|PP}EA{I|L}V{I|L}{I|L};[EP]PA{I|L}V{I|L}{I|L};[VP][DV]PV{I|L}{I|L};{[HG]|PP}EAV{I|L}{I|L}{I|L};[EP]PAV{I|L}{I|L}{I|L};[EP]AP{I|L}V{I|L}{I|L};[EP]A{I|L}PV{I|L}{I|L};[EP]APV{I|L}{I|L}{I|L};{[HG]|PP}EA{I|L}{I|L}V{I|L};[EP]PA{I|L}{I|L}V{I|L} 3.7676;3.7076;3.5606;3.4137;3.3537;3.1466;2.7927;2.7927;2.7072;2.6472 -;-;-;-;-;-;+;-;-;- + 151 1 1.194 61626.4 1.0 11884 4990 16874 HBL1_DMSO_200M_050219_2,16876 HBL1_DMSO_200M_050219_2,16876,PEALPVLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16877 89.253 82.0 920660.0 25 0 76108.0 + 39567 MAPLALHL 8 83 433.25110490470985 864.4876568762197 2 433.2513915896416 MULTI CID FTMS 0 0 0 16874 558279.375 0.565546649445373 -1 0.0659027099609375 3 Unmodified _VCLPALLH_ ENSG00000104951|ENST00000391826|IL4I1;chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1 32.45364647766026 0.3613649037604678 4 {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L} 8 4 + 59.326 0.0 0.0 6.8626 6.8626 76.56 0.0 0.0 0.0 26.989700043360187 0.7058107428570679 0.7058107428570679 0.7058107428570679 0 0.3494850021680094 2.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L};{[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}{I|L}H;{[DS]|[MA]|[CV]|TT}{I|L}PA{I|L}H{I|L};{[DS]|[MA]|[CV]|TT}{I|L}PA{I|L}{I|L}H 6.8626;6.781;6.6589;6.5773 -;-;-;+ + 130 + 1 1.194 62514.4 1.0 11885 4990 16874 HBL1_DMSO_200M_050219_2,16877 HBL1_DMSO_200M_050219_2,16877,VCLPALLH False False MAPLALHL 89.253393 433.251391589642 6205302.5 16874.0 ENSG00000104951|ENST00000391826|IL4I1;;chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1 7.76832103729248 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16878 89.26 386.0 569910.0 25 0 74746.0 + -1 MLSMQMPSL 9 127 527.2425884576086 1052.470623982017 2 527.2429687380791 MULTI CID FTMS 0 0 0 16874 191486.75 0.31011616496204 3 -0.2435073852539062 4 Oxidation (M) _MLSM(Oxidation (M))QMPSL_ REV__ENST00000590806.5_1_19:10919298-10919727:+|nuORF 24.020572477871973 0.2255576514309169 4 {I|L}TDM[C(Carbamidomethyl (C))M]{I|L}G{I|L} 9 -1 + 46.297 0.0 0.0 4.3989 4.3989 75.151 0.0 0.0 0.0 12.5 5.925230508543038 5.925230508543038 5.925230508543038 0 0.5 0.0 0.3494850021680094 0.0 {I|L}TDM[C(Carbamidomethyl (C))M]{I|L}G{I|L};{I|L}TDM[C(Carbamidomethyl (C))M]{I|L}AV;{NN|[MP]|[D{I|L}]|[EV]}V[HQ]MDPV;{I|L}{M(Oxidation (M))|F}{[CP]|[EA]}[C(Carbamidomethyl (C))M]{I|L}G{I|L};{NN|[MP]|[D{I|L}]|[EV]}N[H{I|L}]MDPV;[VP]M[HQ]MDPV;{[VA]|[{I|L}G]}GMHPMDPV;{I|L}{M(Oxidation (M))|F}{[CP]|[EA]}[C(Carbamidomethyl (C))M]{I|L}AV;{[QV]|[N{I|L}]|[RA]|[KV]}MHPMDPV;{NN|[MP]|[D{I|L}]|[EV]}V[HQ]{[CP]|[EA]}E{I|L} 4.3989;3.8359;3.1224;2.307;2.1032;2.0852;1.7727;1.744;1.4837;1.3773 -;-;-;-;-;-;-;-;-;- 498 + 1 1.194 171094.6 1.0 11886 4990 16874 HBL1_DMSO_200M_050219_2,16878 HBL1_DMSO_200M_050219_2,16878,MLSMQMPSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16879 89.264 194.0 376370.0 25 0 24783.0 + 45076 YPYHYAPFL 9 102 585.7845945966401 1169.55463626008 2 585.7837402224541 MULTI CID FTMS 0 0 0 16874 181550.8125 0.1814091093094906 -3 0.2847366333007812 5 Unmodified _YPYHYAPFL_ ENSG00000114127|ENST00000392981|XRN1;ENST00000472697.5_1_3:142095319-142144369:-|nuORF;nc|ENSG00000114127|Q8IZH2|XRN1 56.04830969593885 0.0282699710924866 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[DS]|[MA]|[CV]|TT}NAYP{M(Oxidation (M))|F}{I|L} 10 5 + 65.398 0.0 0.0 5.5917 5.5917 76.728 0.0 0.0 0.0 3.344537511509316 15.026975159433531 3.344537511509316 3.344537511509316 0 1.2302046884880935 2.0 0.3252574989159953 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[DS]|[MA]|[CV]|TT}NAYP{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WNAYP{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[DS]|[MA]|[CV]|TT}NAP{M(Oxidation (M))|F}Y{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[DS]|[MA]|[CV]|TT}NAPY{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[DS]|[MA]|[CV]|TT}GGAYP{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WNAP{M(Oxidation (M))|F}Y{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[DS]|[MA]|[CV]|TT}NYAP{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WNAPY{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WGGAYP{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WNYAP{M(Oxidation (M))|F}{I|L} 5.5917;5.3057;4.9685;4.8861;4.8081;4.6825;4.6689;4.6001;4.5184;4.383 -;-;-;-;-;-;-;-;-;- 687 1 1.194 60539.2 1.0 11887 4990 16874 HBL1_DMSO_200M_050219_2,16879 HBL1_DMSO_200M_050219_2,16879,YPYHYAPFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16880 89.267 134.0 504190.0 25 0 63353.0 + 20822 LLWSFSLLL 9 97 546.3266665300487 1090.6387801268972 2 546.3292724490166 MULTI CID FTMS 0 0 0 16874 151932.234375 0.8102316539580988 -2 0.1789016723632812 6 Unmodified _LLWSFSLLL_ REV__nc|ENSG00000133103|Q9Y2V7-4|COG6 32.116972079565 0.1225432171549407 4 VP{[DS]|[MA]|[CV]|TT}[WD]{I|L}{I|L} 8 -1 26.872 0.0 0.0 2.4639 0.0 0.0 147.12577829140452 0.0 147.12577829140452 0.0 15.278193816289232 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.0 VP{[DS]|[MA]|[CV]|TT}[WD]{I|L}{I|L} 2.4639 - 303 + 1 1.194 58430.9 1.0 11888 4990 16874 HBL1_DMSO_200M_050219_2,16880 HBL1_DMSO_200M_050219_2,16880,LLWSFSLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16881 89.281 800.0 282710.0 25 0 27097.0 -1 EVLKPQCIICG 11 151 658.8383590219412 1315.6621651106825 2 658.8395263552666 MULTI CID FTMS 0 0 0 16874 152531.90625 0.0942444627127181 -3 0.2847366333007812 7 2 Carbamidomethyl (C) _EVLKPQC(Carbamidomethyl (C))IIC(Carbamidomethyl (C))G_ ENSG00000232040|ENST00000452236|SCAND3 51.629811660486645 0.1086041609037681 4 {[QV]|[N{I|L}]|[RA]|[KV]}C[QP]W{I|L}{I|L}{I|L}NC 11 -1 + 51.422 0.0 0.0 3.9085 3.9085 67.713 0.0 0.0 0.0 2.125899735790611 3.936441795848303 2.125899735790611 2.125899735790611 0 1.2231975075880328 0.8860566476931632 0.0 1.208170666312956 {[QV]|[N{I|L}]|[RA]|[KV]}C[QP]W{I|L}{I|L}{I|L}NC;{[TV]|[{I|L}S]}VT[EP]D{I|L}{I|L}{I|L}NC;{NN|[MP]|[D{I|L}]|[EV]}[KG]{[NV]|[RG]}D{I|L}{I|L}{I|L}NC;{I|L}{I|L}{[CA]|SS}[EP]D{I|L}{I|L}{I|L}NC;{NN|[MP]|[D{I|L}]|[EV]}EP{I|L}{[CA]|SS}{I|L}{I|L}{I|L}NC;{NN|[MP]|[D{I|L}]|[EV]}[TP]{[TV]|[{I|L}S]}D{I|L}{I|L}{I|L}NC;{NN|[MP]|[D{I|L}]|[EV]}EPT[VS]{I|L}{I|L}{I|L}NC;{[QN]|[E{I|L}]|[KN]}DPTW{I|L}{I|L}{I|L}NC;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[EP]{[CA]|SS}{I|L}{I|L}{I|L}NC;[VS]{I|L}T[EP]D{I|L}{I|L}{I|L}NC 3.9085;3.7469;3.7426;3.6913;3.6612;3.5579;3.5273;3.3643;3.285;3.2805 -;-;-;-;-;-;-;-;-;- 1738 1 1.194 176597.3 0.7099999785423279 11889 4990 16874 HBL1_DMSO_200M_050219_2,16881 HBL1_DMSO_200M_050219_2,16881,EVLKPQCIICG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16882 89.291 618.0 230980.0 25 0 22353.0 + 20745 LLSPVVPQI 9 146 483.3050873058521 964.5956216785042 2 483.3052551150322 MULTI CID FTMS 0 0 0 16874 139901.59375 0.6955943268253919 2 -0.1988372802734375 8 Unmodified _LLSPVVPQI_ ENSG00000102900|ENST00000308159|NUP93;nc|ENSG00000102900|Q8N1F7-2|NUP93 64.23631603340823 0.0237365939569086 4 [VP]SV{I|L}{I|L} 6 6 47.042 0.0 0.0 4.8768 0.0 0.0 0.0 353.1815951494605 353.1815951494605 20.35286792487718 0.0 0.0 0.0 0 0.5 1.0969100130080565 1.370371515030528 0.0 [VP]SV{I|L}{I|L} 4.8768 - 966 1 1.194 113105.0 1.0 11890 4990 16874 HBL1_DMSO_200M_050219_2,16882 HBL1_DMSO_200M_050219_2,16882,LLSPVVPQI True True LLSPVVPQI 89.291405 483.305255115032 2417124.25 16874.0 nc|ENSG00000102900|Q8N1F7-2|NUP93;;ENSG00000102900|ENST00000308159|NUP93 4.115352948506673 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16883 89.304 705.0 334340.0 25 0 34335.0 2999 AVILDIFRR 9 142 368.2289943409551 1101.6651536230652 3 368.2289001345634 MULTI CID FTMS 0 0 0 16874 126969.4140625 0.2572023074528267 -3 0.2847366333007812 9 Unmodified _AVILDIFRR_ ENSG00000103154|ENST00000305202|NECAB2 30.7034409873982 0.1405282614900322 4 AV{I|L}D{I|L}R 6 3 76.459 0.0 0.0 6.9403 0.0 0.0 0.0 431.24152551822505 431.24152551822505 62.96388461952553 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 1.1549471895720984 AV{I|L}D{I|L}R 6.9403 - 131 + 1 1.194 195055.3 1.0 11891 4990 16874 HBL1_DMSO_200M_050219_2,16883 HBL1_DMSO_200M_050219_2,16883,AVILDIFRR False True AVIDRFLRL 89.303639 368.228900134563 12448118.0 16874.0 ENSG00000132313|ENST00000337109|MRPL35;;nc|ENSG00000132313|Q9NZE8-2|MRPL35 2.9458185036977134 3.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16884 89.317 800.0 113860.0 25 0 36918.0 + 43285 WILLLERLLFW 11 114 751.450722528984 1500.886892124768 2 751.4537231326103 MULTI CID FTMS 0 0 0 16874 122997.7578125 0.8945057685992298 -1 0.0659027099609375 10 Unmodified _WILLLERLLFW_ REV__ENST00000514949.1_1_5:122111316-122111454:+|nuORF 0.3506318815782774 0.8734936314171269 4 {[QN]|[E{I|L}]|[KN]}K 3 -1 21.427 0.0 0.0 1.4276 0.0 0.0 0.0 1127.6433367871305 1127.6433367871305 10.457574905606748 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[QN]|[E{I|L}]|[KN]}K 1.4276 - 122 1 1.194 75191.2 0.6200000047683716 11892 4990 16874 HBL1_DMSO_200M_050219_2,16884 HBL1_DMSO_200M_050219_2,16884,WILLLERLLFW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16885 89.325 358.0 255840.0 25 0 30186.0 + 20514 LLLPDQPPYHL 11 85 653.3643896168535 1304.7142263005069 2 653.3635742068291 MULTI CID FTMS 0 0 0 16874 113308.015625 0.5172676288995709 -3 0.2847366333007812 11 Unmodified _LLLPDQPPYHL_ ENSG00000156587|ENST00000287156|UBE2L6 62.57269311338072 0.058704053366003 4 {I|L}{I|L}{I|L}PDQPPYH{I|L} 11 0 + 82.86 0.0 0.0 6.3508 6.3508 89.668 0.0 0.0 0.0 54.40018805667883 10.810935890735225 10.810935890735225 14.128498242811006 0 0.9247425010840048 1.6989700043360187 0.8494850021680094 0.5 + + {I|L}{I|L}{I|L}PDQPPYH{I|L};{I|L}{I|L}{I|L}PD[AG]PPYH{I|L};{I|L}{I|L}{I|L}PDQPP[WQ]V;{I|L}{I|L}{I|L}PDQ[TA]{[QG]|[NA]}H{I|L};{I|L}{I|L}{I|L}PD[AG]PP[WQ]V;{I|L}{I|L}{I|L}[QT][HA]PYH{I|L};{I|L}{I|L}[WR][HA]PYH{I|L};[DP]QP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{I|L}{I|L}{I|L};[DP][AG]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{I|L}{I|L}{I|L};[DP]QP[W{I|L}][NP]{I|L}{I|L}{I|L} 6.3508;5.268;5.1586;4.8661;4.4589;4.1512;2.6706;2.2897;1.5901;1.5448 +;-;-;-;-;-;-;-;-;- + 583 + 1 1.194 74584.7 1.0 11893 4990 16874 HBL1_DMSO_200M_050219_2,16885 HBL1_DMSO_200M_050219_2,16885,LLLPDQPPYHL True True LLLPDQPPYHL 89.325401 653.363574206829 2919225.0 16874.0 ENSG00000156587|ENST00000287156|UBE2L6 7.551461855570476 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16886 89.338 722.0 195240.0 25 0 18672.0 23745 LTWQLQPV 8 171 492.780954065238 983.547355197276 2 492.7830993533134 MULTI CID FTMS 0 0 0 16874 92096.5546875 0.0655097384918432 4 -0.3197250366210937 12 Unmodified _LTWQLQPV_ ENSG00000009694|ENST00000371130|TENM1;nc|ENSG00000009694|Q9UKZ4-2|TENM1 32.116972079565 0.368454113111938 4 [{I|L}T]Q{I|L}S{I|L} 6 4 26.057 0.0 0.0 2.6493 0.0 0.0 0.0 325.1341831604198 325.1341831604198 4.55405453862582 0.0 0.0 0.0 0 0.0 0.638272163982407 0.8391368308784531 1.41944517631652 [{I|L}T]Q{I|L}S{I|L} 2.6493 - 2572 1 1.194 111369.3 1.0 11894 4990 16874 HBL1_DMSO_200M_050219_2,16886 HBL1_DMSO_200M_050219_2,16886,LTWQLQPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16887 89.352 800.0 79081.0 25 0 16187.0 + 6336 DVKRLLKRESL 11 105 678.9179666897368 1355.8213804462737 2 678.9193603396416 MULTI CID FTMS 0 0 0 16874 84073.3203125 1.0 0 0.0 13 Unmodified _DVKRLLKRESL_ REV__ENSG00000181215|ENST00000531445|C4orf50 5.731851221503515 0.8481046878870278 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F} 3 -1 16.189 0.0 0.0 1.1941 0.0 0.0 0.0 1005.6502433215264 1005.6502433215264 2.6946344275718594 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.555462187404089 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F} 1.1941 - 49 1 1.194 56295.2 0.5600000023841858 11895 4990 16874 HBL1_DMSO_200M_050219_2,16887 HBL1_DMSO_200M_050219_2,16887,DVKRLLKRESL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16889 89.357 26.0 2194200.0 25 0 214360.0 + 34917 SQIISLQTL 9 94 501.7954322394132 1001.5763115456264 2 501.7956725955009 MULTI CID FTMS 0 0 0 16888 1854358.25 1.0 0 0.0 1 Unmodified _SQIISLQTL_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF 53.832793166522166 0.0319663582346103 4 [{I|L}T]N{I|L}T{I|L} 6 5 34.675 0.0 0.0 3.4621 0.0 0.0 0.0 343.1622239814265 343.1622239814265 15.074455762580056 0.0 0.0 0.0 0 0.0 1.154901959985743 0.2887254899964357 0.2614393726401688 [{I|L}T]N{I|L}T{I|L} 3.4621 - 772 1 1.209 52460.3 1.0 11896 4991 16888 HBL1_DMSO_200M_050219_2,16889 HBL1_DMSO_200M_050219_2,16889,SQIISLQTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16890 89.358 63.0 840080.0 25 0 117800.0 + 1262 AILMELERV 9 76 537.3041185625092 1072.5936841918185 2 537.3046142458916 MULTI CID FTMS 0 0 0 16888 363177.3125 0.1009570636727358 8 -0.8715744018554688 2 Unmodified _AILMELERV_ ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR 27.628801355627647 0.1796483985696185 4 [{I|L}A]{I|L}MEREV{I|L} 9 3 + 60.34 0.0 0.0 5.6256 5.6256 77.713 0.0 0.0 0.0 11.460828060918828 3.935078169319297 3.935078169319297 3.935078169319297 0 1.3182503180159344 2.0 0.3054621874040891 0.0 [{I|L}A]{I|L}MEREV{I|L};[{I|L}A]{I|L}ME{[QN]|[E{I|L}]|[KN]}RV;[{I|L}A]{I|L}MERE{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}AEREV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}AE{[QN]|[E{I|L}]|[KN]}RV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}AERE{I|L}V;[{I|L}A]{I|L}[HT][YT]RV;[{I|L}A]{I|L}[HT][YR]S{I|L};[{I|L}A]VHH{[QN]|[E{I|L}]|[KN]}RV;[{I|L}A]{I|L}[HT][YR]TV 5.6256;5.2587;5.2546;4.5571;4.1902;4.1861;2.8548;2.6906;2.479;2.3196 -;+;-;-;-;-;-;-;-;- + 96 + 1 1.209 49085.5 1.0 11897 4991 16888 HBL1_DMSO_200M_050219_2,16890 HBL1_DMSO_200M_050219_2,16890,AILMELERV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16891 89.359 34.0 2369700.0 25 0 419840.0 + 30643 RFPDFVRDF 9 64 599.8039573542546 1197.5933617753092 2 599.8042480349541 MULTI CID FTMS 0 0 0 16888 1454021.875 0.5598559393747516 -2 0.1752166748046875 3 Unmodified _RFPDFVRDF_ ENSG00000213339|ENST00000250237|QTRT1;ENST00000587500.5_1_19:10823370-10823943:+|nuORF 44.391923383255 0.0526658857881241 4 [R{M(Oxidation (M))|F}][DP]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F} 9 0 + 52.686 0.0 0.0 4.3993 4.3993 67.36 0.0 0.0 0.0 1.0475750727131583 13.878493940035447 1.0475750727131583 1.0475750727131583 0 1.7302046884880935 0.0 0.0 0.7302046884880937 + + [R{M(Oxidation (M))|F}][DP]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{M(Oxidation (M))|F}R[DP]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};{M(Oxidation (M))|F}D[RP]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};R{M(Oxidation (M))|F}[DP]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}][SG]{[QS]|[NT]}VRD{M(Oxidation (M))|F} 4.3993;4.3119;3.6389;3.3508;3.2405;2.4966 +;-;-;-;+;- + 137 1 1.209 65229.6 1.0 11898 4991 16888 HBL1_DMSO_200M_050219_2,16891 HBL1_DMSO_200M_050219_2,16891,RFPDFVRDF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16892 89.362 143.0 408380.0 25 0 73322.0 + 13167 HFRLRQTLRI 10 75 447.2728036924574 1338.7965816775722 3 447.2729369997978 MULTI CID FTMS 0 0 0 16888 430393.0625 0.7038102273663374 1 -0.0895233154296875 4 Unmodified _HFRLRQTLRI_ REV__ENSG00000198844|ENST00000361926|ARHGEF15 0.4583401331227399 0.7245164002484112 4 {I|L} 1 -1 10.713 0.0 0.0 0.80022 0.0 0.0 1207.7017158101878 0.0 1207.7017158101878 0.0 7.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80022 + + 7 + 1 1.209 59895.8 1.0 11899 4991 16888 HBL1_DMSO_200M_050219_2,16892 HBL1_DMSO_200M_050219_2,16892,HFRLRQTLRI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16893 89.364 99.0 527220.0 25 0 92031.0 + 20262 LLDPSVFHV 9 81 513.7845222234655 1025.554491513731 2 513.7856323122978 MULTI CID FTMS 0 0 0 16888 374121.53125 0.6404708692188301 1 -0.0895233154296875 5 Unmodified _LLDPSVFHV_ ENSG00000184967|ENST00000330579|NOC4L;ENST00000538784.2_1_12:132635515-132636943:+|nuORF 44.40701690623563 0.0526327925666318 4 {I|L}{I|L}DPSV{M(Oxidation (M))|F}HV 9 0 + 74.441 0.0 0.0 7.2586 7.2586 93.381 0.0 0.0 0.0 55.60640786546689 10.084406814122232 10.084406814122232 17.55780949711785 0 0.8807196863200843 2.0 0.3807196863200844 0.0 + + {I|L}{I|L}DPSV{M(Oxidation (M))|F}HV;{I|L}{I|L}DV[PS]{M(Oxidation (M))|F}HV;{I|L}{I|L}DP[KP]{[QC]|[C(Carbamidomethyl (C))A]}{I|L};{I|L}{I|L}DV{[WN]|[YH]}[PG]{I|L};{I|L}{I|L}DP[KP][MN]V;{I|L}{I|L}{[ET]|[MV]}[PA]{M(Oxidation (M))|F}HV;{I|L}{I|L}DV{[WN]|[YH]}[PA]V 7.2586;5.5466;3.5471;3.3754;3.2307;3.1585;3.059 +;-;-;-;-;-;- + 171 + 1 1.209 46669.0 1.0 11900 4991 16888 HBL1_DMSO_200M_050219_2,16893 HBL1_DMSO_200M_050219_2,16893,LLDPSVFHV True True LLDPSVFHV 89.364294 513.785632312298 9655650.0 16888.0 ENSG00000184967|ENST00000330579|NOC4L;;ENST00000538784.2_1_12:132635515-132636943:+|nuORF 8.849342346191406 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16894 89.367 157.0 317700.0 25 0 42594.0 -1 ALMAAPLSL 9 68 451.75274496202985 901.4909369908596 2 451.7527038455009 MULTI CID FTMS 0 0 0 16888 319296.375 0.0245850447005537 76 -7.648811340332031 6 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 32.116972079565 0.1225432171549407 4 [{I|L}A][WE]S{I|L}A{I|L} 8 -1 + 43.874 0.0 0.0 4.8668 4.8668 75.137 0.0 0.0 0.0 14.488474775526186 21.938200260161125 14.488474775526186 4.313637641589871 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}W{I|L}A{I|L};[{I|L}A][EC]{[VA]|[{I|L}G]}{I|L}A{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}PS{I|L}A{I|L};{[TV]|[{I|L}S]}[RD]D{I|L}A{I|L};[{I|L}P]C[VS]S{I|L}A{I|L} 4.8668;4.3883;4.3376;4.199;3.8394;2.9197;2.2011;1.9491 -;-;-;-;-;-;-;- 107 1 1.209 45933.4 1.0 11901 4991 16888 HBL1_DMSO_200M_050219_2,16894 HBL1_DMSO_200M_050219_2,16894,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16895 89.374 376.0 293750.0 25 0 20415.0 41890 VQCETLEDLKL 11 133 645.8345195812531 0 645.8347045779228 PEAK CID FTMS 0 0 0 16888 263719.1875 0.80916608473093 -2 0.1752166748046875 7 Unmodified _VQCETLEDLKL_ ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000561658.5_1_16:67486328-67515058:-|nuORF 70.92866715596459 0.0018779997737896 4 QCET{I|L}ED{I|L}K 9 2 63.506 0.0 0.0 4.9243 0.0 0.0 99.0721212914569 128.07196985416252 227.14409114561943 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.7742275032520141 1.0994850021680094 + QCET{I|L}ED{I|L}K 4.9243 + + 387 + 1 1.209 85330.1 1.0 11902 4991 16888 HBL1_DMSO_200M_050219_2,16895 HBL1_DMSO_200M_050219_2,16895,VQCETLEDLKL True True VQCETLEDLKI 89.374163 645.834704577923 2549164.0 16888.0 ENSG00000147614|ENST00000285393|ATP6V0D2 5.002005338668823 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16896 89.378 184.0 719260.0 25 0 59053.0 + 28653 PVLGHRNKL 9 134 517.3181254860068 1032.6216980388135 2 518.3215820193291 MULTI CID FTMS 0 0 0 16888 258269.90625 0.1801982490196697 -4 0.3940505981445312 8 Unmodified _PVLGHRNKL_ REV__ENSG00000111786|ENST00000229390|SRSF9 13.50788311687929 0.4710407108020397 4 {I|L} 1 -1 12.474 0.0 0.0 1.208 0.0 0.0 901.5268016538512 0.0 901.5268016538512 0.0 0.23393858522466 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.208 + + 269 + 1 1.209 111255.0 1.0 11903 4991 16888 HBL1_DMSO_200M_050219_2,16896 HBL1_DMSO_200M_050219_2,16896,PVLGHRNKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16897 89.381 171.0 507060.0 25 0 65114.0 + 30645 RFPDFVRDF 9 80 400.2050806002729 1197.593412401019 3 400.2049743533134 MULTI CID FTMS 0 0 0 16888 259538.3125 0.4261358610378242 -1 0.10931396484375 9 Unmodified _RFPDFVRDF_ ENSG00000213339|ENST00000250237|QTRT1;ENST00000587500.5_1_19:10823370-10823943:+|nuORF 34.93206674587334 0.1032771302489716 4 [R{M(Oxidation (M))|F}]PD{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[RD] 9 2 [R{M(Oxidation (M))|F}]P + + 39.174 5.0617 1.2647 3.2711 3.2711 46.596 0.0 0.0 0.0 0.0 27.58024070117017 0.0 0.0 0 0.9247425010840048 0.0 0.2742275032520141 0.6549471895720984 [R{M(Oxidation (M))|F}]PD{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[RD] 3.2711 - 133 + 1 1.209 73179.9 1.0 11904 4991 16888 HBL1_DMSO_200M_050219_2,16897 HBL1_DMSO_200M_050219_2,16897,RFPDFVRDF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16898 89.384 168.0 408270.0 25 0 35488.0 -1 MAALLLRH 8 100 470.77172614517326 939.5288993571464 2 470.7719604372978 MULTI CID FTMS 0 0 0 16888 251873.03125 0.7837864435587177 2 -0.1341934204101562 10 Oxidation (M) _M(Oxidation (M))AALLLRH_ ENSG00000143252|ENST00000367975|SDHC;nc|ENSG00000143252|Q99643-2|SDHC;nc|ENSG00000143252|Q99643-3|SDHC;nc|ENSG00000143252|Q99643-4|SDHC 32.116972079565 0.368454113111938 4 {I|L}{I|L}{I|L}HR 5 -1 49.698 0.0 0.0 5.2896 0.0 0.0 289.1041980235705 0.0 289.1041980235705 0.0 36.59863006256506 0.0 0.0 0 1.1861818737241734 0.0 0.0 0.2887254899964357 {I|L}{I|L}{I|L}HR 5.2896 - 145 + 1 1.209 55052.1 1.0 11905 4991 16888 HBL1_DMSO_200M_050219_2,16898 HBL1_DMSO_200M_050219_2,16898,MAALLLRH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16899 89.388 161.0 557090.0 25 0 34851.0 -1 0 94 943.475313160726 1884.936073388252 2 943.4803954958916 MULTI CID FTMS 0 0 0 16888 244431.046875 0.7944719765515897 5 -0.4477157592773437 11 4 [NP]N{I|L}{I|L}T{I|L}N[HD]N 11 -1 52.471 0.0 0.0 2.7837 0.0 0.0 0.0 636.3327129531427 636.3327129531427 10.05282415962693 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.75 1.024227503252014 [NP]N{I|L}{I|L}T{I|L}N[HD]N 2.7837 - 2568 1 1.209 63650.3 1.0 11906 4991 16888 HBL1_DMSO_200M_050219_2,16899 HBL1_DMSO_200M_050219_2,16899, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16900 89.392 229.0 288110.0 25 0 77157.0 + 24917 MPPEPIII 8 90 455.25902358556806 908.503494237936 2 455.2603942751884 MULTI CID FTMS 0 0 0 16888 226967.765625 1.0 0 0.0 12 Unmodified _MPPEPIII_ ENSG00000066117|ENST00000394963|SMARCD1;nc|ENSG00000066117|Q96GM5-2|SMARCD1 26.34127834903884 0.4900704351052977 4 [EP]P{I|L}PM{I|L}{I|L} 8 3 + 35.807 0.0 0.0 3.9413 3.9413 48.512 0.0 0.0 0.0 3.521825181113627 10.172203223519531 3.521825181113627 0.0 0 0.8182503180159344 0.0 0.0 0.0 [EP]P{I|L}PM{I|L}{I|L};[EP]PMP{I|L}{I|L}{I|L};[{I|L}P][EP]PM{I|L}{I|L};[EP]P{I|L}P{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}P][EP]P{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}[EP]P{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YG]P{I|L}{I|L}{I|L} 3.9413;3.9413;3.5537;2.7093;2.3217;1.9646;1.7399 -;-;-;-;-;+;- + 107 1 1.209 58285.5 1.0 11907 4991 16888 HBL1_DMSO_200M_050219_2,16900 HBL1_DMSO_200M_050219_2,16900,MPPEPIII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16901 89.406 800.0 161260.0 25 0 8346.6 + 37479 FTIETEGKTFQL 12 149 707.3657939673307 1412.7170350014612 2 707.3671142458916 MULTI CID FTMS 0 0 0 16888 184068.875 1.0 0 0.0 13 2 Carbamidomethyl (C) _TLFIFLVC(Carbamidomethyl (C))C(Carbamidomethyl (C))QI_ nc|ENSG00000106105|P41250-2|GARS1;ENSG00000106105|ENST00000389266|GARS1 56.17704186161178 0.0846604386095034 4 {M(Oxidation (M))|F}T{I|L}ETEGKT{M(Oxidation (M))|F}Q{I|L} 12 8 + 96.509 0.0 0.0 6.8315 6.8315 90.989 0.0 0.0 0.0 29.12126808949664 19.93347406178557 19.93347406178557 12.525749891599531 0 2.052887198244136 0.0 1.4436726795685342 1.5994850021680094 {M(Oxidation (M))|F}T{I|L}ETEGKT{M(Oxidation (M))|F}Q{I|L};{M(Oxidation (M))|F}T{I|L}ETDAKT{M(Oxidation (M))|F}Q{I|L};{M(Oxidation (M))|F}T{I|L}ETEGKT{M(Oxidation (M))|F}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}GYVET{I|L}{M(Oxidation (M))|F}{I|L}TE;{[QN]|[E{I|L}]|[KN]}HH{M(Oxidation (M))|F}Q{I|L}{M(Oxidation (M))|F}{I|L}TE;{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F}[KG][YK]E{I|L}TE;{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}{M(Oxidation (M))|F}{I|L}TE;{M(Oxidation (M))|F}T{I|L}ETDAKT{M(Oxidation (M))|F}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[YR]ET{I|L}{M(Oxidation (M))|F}{I|L}TE;[{I|L}T][NS]{M(Oxidation (M))|F}TQ{I|L}{M(Oxidation (M))|F}{I|L}TE 6.8315;5.9448;5.8335;5.4286;5.3442;5.0797;5.0381;4.9469;4.9393;4.9206 -;-;-;-;-;-;-;-;-;- 48455 + 1 1.209 98738.4 0.7799999713897705 11908 4991 16888 HBL1_DMSO_200M_050219_2,16901 HBL1_DMSO_200M_050219_2,16901,TLFIFLVCCQI True False FTIETEGKTFQL 89.405671 707.367114245892 1261954.125 16888.0 nc|ENSG00000106105|P41250-2|GARS1;;ENSG00000106105|ENST00000389266|GARS1 7.330694516499837 2.0 False 12.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16902 89.411 275.0 605490.0 25 0 71152.0 + 18302 KVLDILQHI 9 145 539.8346054124613 1077.6546578917223 2 539.8349487185478 MULTI CID FTMS 0 0 0 16888 182050.921875 0.1507534347108129 -3 0.2882156372070312 14 Unmodified _KVLDILQHI_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 128.93241758739586 0.006154487147897 4 KV{I|L}D{I|L}{I|L}QH{I|L} 9 0 + 115.51 0.0 0.0 10.719 10.719 84.788 0.0 0.0 0.0 24.17368560510363 2.340832060333682 2.340832060333682 2.340832060333682 0 3.0356668758921828 0.7695510786217261 0.7302046884880937 0.8252574989159953 + + KV{I|L}D{I|L}{I|L}QH{I|L};KV{I|L}D{I|L}{I|L}Q{I|L}H;KV{I|L}D{I|L}{I|L}[AG]H{I|L};KV{I|L}D{I|L}{I|L}[AG]{I|L}H;KV{I|L}D{I|L}AG{I|L}H{I|L};KV{I|L}D{I|L}AG{I|L}{I|L}H;KV{I|L}DA{I|L}G{I|L}H{I|L};KV{I|L}DA{I|L}G{I|L}{I|L}H;{I|L}[TA]{[VA]|[{I|L}G]}{I|L}{I|L}QH{I|L};{I|L}[TA]{[VA]|[{I|L}G]}{I|L}{I|L}Q{I|L}H 10.719;10.501;9.0984;8.8812;8.4249;8.2077;7.2389;7.0216;5.0099;4.7927 +;-;-;-;-;-;-;-;-;- + 2518 + 1 1.209 127989.0 1.0 11909 4991 16888 HBL1_DMSO_200M_050219_2,16902 HBL1_DMSO_200M_050219_2,16902,KVLDILQHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16903 89.414 139.0 507260.0 25 0 40817.0 + 40724 RYLTVAAVF 9 93 520.3009568347859 1038.5873607363717 2 520.3016845583916 MULTI CID FTMS 0 0 0 16888 153390.9375 0.7667970148638187 -1 0.10931396484375 15 Unmodified _VLHQVTPVF_ ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000196230|ENST00000327892|TUBB;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000188229|ENST00000340384|TUBB4B;ENST00000454403.1_1_13:41958968-41959286:-|nuORF 15.847184025352805 0.4077185912009129 4 AAV{M(Oxidation (M))|F} 4 7 38.175 0.0 0.0 3.6757 0.0 0.0 632.3636196574072 0.0 632.3636196574072 0.0 21.938200260161125 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 AAV{M(Oxidation (M))|F} 3.6757 - 127 1 1.209 59977.8 1.0 11910 4991 16888 HBL1_DMSO_200M_050219_2,16903 HBL1_DMSO_200M_050219_2,16903,VLHQVTPVF False False RYLTVAAVF 89.413579 520.3006 1548136.875 16888.0 ENST00000604929.1_1_9:140136931-140138005:+|nuORF;;ENSG00000196230|ENST00000327892|TUBB;;ENSG00000104833|ENST00000264071|TUBB4A;;ENSG00000188229|ENST00000340384|TUBB4B;;ENST00000454403.1_1_13:41958968-41959286:-|nuORF 2.52490758895874 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16904 89.429 800.0 248550.0 25 0 14170.0 + 3291 AYIDPIAMEY 10 177 593.2786356373804 1184.5427183415609 2 593.2784301638603 MULTI CID FTMS 0 0 0 16888 144828.265625 0.7128239667965396 -1 0.10931396484375 16 Unmodified _AYIDPIAMEY_ ENSG00000086730|ENST00000460943|LAT2;ENST00000490586.1_1_7:73634828-73639069:+|nuORF 49.93300154707207 0.0805441195901191 4 [{I|L}P]AMEDAY{I|L}Y 10 8 + 39.307 0.0 0.0 3.3183 3.3183 66.131 0.0 0.0 0.0 6.16319406694884 10.901603887290593 6.16319406694884 2.218487496163561 0 0.3935078169319297 1.2218487496163564 0.0 0.0 [{I|L}P]AMEDAY{I|L}Y;[{I|L}P]ADMEAY{I|L}Y;[{I|L}P]AMEGEY{I|L}Y;[{I|L}P]AMDEAY{I|L}Y;[{I|L}P]AMEGYE{I|L}Y;[{I|L}P]ADMAEY{I|L}Y;[{I|L}P]AMDAEY{I|L}Y;[{I|L}P]AMEADY{I|L}Y;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{NN|[MP]|[D{I|L}]|[EV]}PAME{I|L}Y;[{I|L}P]ADMAYE{I|L}Y 3.3183;3.131;3.0642;3.0642;2.9155;2.8769;2.81;2.81;2.798;2.7282 -;-;-;-;-;-;-;-;-;- 2481 1 1.209 149406.6 0.6800000071525574 11911 4991 16888 HBL1_DMSO_200M_050219_2,16904 HBL1_DMSO_200M_050219_2,16904,AYIDPIAMEY True True AYIDPIAMEY 89.428584 593.27843016386 1720889.5 16888.0 ENST00000490586.1_1_7:73634828-73639069:+|nuORF;;ENSG00000086730|ENST00000460943|LAT2 4.891930341720581 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16905 89.432 187.0 344700.0 25 0 67438.0 + 15909 ISTPIFRRL 9 69 551.841345280241 1101.6681376272818 2 551.8413574099541 MULTI CID FTMS 0 0 0 16888 111644.6171875 0.8908737394649687 -1 0.10931396484375 17 Unmodified _ISTPIFRRL_ REV__ENSG00000168538|ENST00000334690|TRAPPC11 10.799506525563784 0.5443532743200366 4 {I|L} 1 -1 12.474 0.0 0.0 1.1323 0.0 0.0 970.5732717598976 0.0 970.5732717598976 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1323 + + 16 + 1 1.209 57963.5 1.0 11912 4991 16888 HBL1_DMSO_200M_050219_2,16905 HBL1_DMSO_200M_050219_2,16905,ISTPIFRRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16906 89.441 515.0 199560.0 25 0 23002.0 + 45765 YYISPRLTF 9 99 580.3110719907387 1158.6075910482773 2 580.3104736208916 MULTI CID FTMS 0 0 0 16888 105351.5703125 0.0043142931615152 12 -1.221221923828125 18 Unmodified _YYISPRLTF_ ENSG00000155926|ENST00000338087|SLA;nc|ENSG00000155926|Q13239-2|SLA;nc|ENSG00000155926|Q13239-3|SLA;nc|ENSG00000155926|Q13239-5|SLA 22.736283301280096 0.2418982879461534 4 YY{I|L}S 4 5 64.68 0.0 0.0 5.5826 0.0 0.0 0.0 629.3419464422253 629.3419464422253 52.4619877965177 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + YY{I|L}S 5.5826 + + 134 + 1 1.209 81401.2 1.0 11913 4991 16888 HBL1_DMSO_200M_050219_2,16906 HBL1_DMSO_200M_050219_2,16906,YYISPRLTF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16908 89.446 13.0 3566400.0 25 0 237110.0 + 25074 MPVIPMNTI 9 78 508.2689851400359 1014.5234173468718 2 508.2698547244072 MULTI CID FTMS 0 0 0 16907 3442251.25 0.195186760589895 4 -0.3581924438476562 1 Unmodified _MPVIPMNTI_ ENSG00000147162|ENST00000373719|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;nc|ENSG00000147162|O15294-4|OGT 67.03532852164291 0.0222449892513529 4 [VP]M{I|L}PM 6 5 39.87 0.0 0.0 3.9299 0.0 0.0 0.0 343.15871580196466 343.15871580196466 15.60906858619152 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.0 0.0 [VP]M{I|L}PM 3.9299 - 139 1 1.225 40285.8 1.0 11914 4992 16907 HBL1_DMSO_200M_050219_2,16908 HBL1_DMSO_200M_050219_2,16908,MPVIPMNTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16909 89.447 14.0 2304800.0 25 0 100760.0 + 45531 YTVEDLATQL 10 79 576.7920957725261 1151.569638611852 2 576.7924682497978 MULTI CID FTMS 0 0 0 16907 3789311.0 0.9785151057653412 1 -0.0446701049804687 2 Unmodified _YTVEDLATQL_ ENSG00000124571|ENST00000265351|XPO5 58.6788170122104 0.0400518768368984 4 [YT]{NN|[MP]|[D{I|L}]|[EV]}D{I|L} 6 4 24.161 0.0 0.0 2.0981 0.0 0.0 0.0 428.2134734109333 428.2134734109333 6.522496736287451 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.1307196863200843 0.0 + [YT]{NN|[MP]|[D{I|L}]|[EV]}D{I|L} 2.0981 + + 193 1 1.225 32429.3 1.0 11915 4992 16907 HBL1_DMSO_200M_050219_2,16909 HBL1_DMSO_200M_050219_2,16909,YTVEDLATQL True True YTVEDLATQL 89.447248 576.792468249798 30427176.0 16907.0 ENSG00000124571|ENST00000265351|XPO5 6.051381429036458 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16910 89.448 8.9 6554400.0 25 0 1018600.0 + 26527 NVIDNLIVA 9 77 485.7819795896355 969.549406246071 2 485.7825195193291 MULTI CID FTMS 0 0 0 16907 6329816.5 0.0758644640740546 -4 0.3777389526367187 3 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 36.12702656103203 0.0967173616627612 4 {[NV]|[RG]}E{I|L}VN 6 5 31.042 0.0 0.0 3.2017 0.0 0.0 0.0 298.17800053915624 298.17800053915624 16.789623657894033 0.0 0.0 0.0 0 0.0 0.0 0.5891368308784531 0.8494850021680094 {[NV]|[RG]}E{I|L}VN 3.2017 - 394 1 1.225 48426.6 1.0 11916 4992 16907 HBL1_DMSO_200M_050219_2,16910 HBL1_DMSO_200M_050219_2,16910,NVIDNLIVA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16911 89.45 19.0 3139200.0 25 0 259240.0 + 29871 QQVQRLPFL 9 71 564.8298166012579 1127.6450802693157 2 564.8303100466728 MULTI CID FTMS 0 0 0 16907 2880907.75 0.9525566309496089 1 -0.0446701049804687 4 Unmodified _QQVQRLPFL_ ENSG00000132963|ENST00000380842|POMP 92.8221339359638 0.0138398038803217 4 [AG]QVQR{I|L}P{M(Oxidation (M))|F}{I|L} 10 2 + 63.471 0.0 0.0 5.6286 5.6286 83.407 0.0 0.0 0.0 45.3988972566097 14.146518864155126 14.146518864155126 9.164539485499256 0 1.5669015600442575 1.3979400086720375 0.0 0.0 [AG]QVQR{I|L}P{M(Oxidation (M))|F}{I|L};[AG][AG]VQR{I|L}P{M(Oxidation (M))|F}{I|L};[AG]QV[AG]R{I|L}P{M(Oxidation (M))|F}{I|L};[AG][AG]V[AG]R{I|L}P{M(Oxidation (M))|F}{I|L};[AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HV]{I|L}P{M(Oxidation (M))|F}{I|L};[AG]R[YV]{I|L}{I|L}V[HT];[AG]V[YR]{I|L}{I|L}V[HT];{[{M(Oxidation (M))|F}H]|[RQ]}[YV]{I|L}{I|L}V[HT];{[QV]|[N{I|L}]|[RA]|[KV]}[YR]{I|L}{I|L}V[HT] 5.6286;4.8159;4.8159;4.0064;2.4801;1.4028;1.2061;0.23646;0.039724 -;-;-;-;-;-;-;-;- 210 + 1 1.225 50759.2 1.0 11917 4992 16907 HBL1_DMSO_200M_050219_2,16911 HBL1_DMSO_200M_050219_2,16911,QQVQRLPFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16912 89.451 34.0 1620800.0 25 0 224840.0 + 9194 FGGVLILIHR 10 57 375.5693297980315 1123.6861599942945 3 375.5693847537041 MULTI CID FTMS 0 0 0 16907 1413481.125 0.0493869516009796 6 -0.6180953979492188 5 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 24.020572477871973 0.4289996903560794 4 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 [{I|L}V]{M(Oxidation (M))|F} + + 45.394 21.622 6.0191 4.0397 4.0397 48.779 0.0 0.0 0.0 0.0 23.77201723532908 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 4.0397 - 90 + 1 1.225 51759.0 1.0 11918 4992 16907 HBL1_DMSO_200M_050219_2,16912 HBL1_DMSO_200M_050219_2,16912,FGGVLILIHR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16913 89.452 32.0 1828800.0 25 0 242600.0 + 9997 FPITALREI 9 63 530.3138787056866 1058.6132044781732 2 530.3140136599541 MULTI CID FTMS 0 0 0 16907 1311915.125 0.8473743421443575 1 -0.0446701049804687 6 Unmodified _FPITALREI_ ENSG00000136807|ENST00000373264|CDK9;nc|ENSG00000136807|P50750-2|CDK9 36.506200033944 0.094635877243972 4 {M(Oxidation (M))|F}P{I|L}TA{I|L}K[RN] 9 3 + 62.005 0.0 0.0 5.8572 5.8572 88.18 0.0 0.0 0.0 45.80706579873059 3.979400086720375 3.979400086720375 16.197887582883936 0 0.5 0.0 1.1421590589602533 0.0 {M(Oxidation (M))|F}P{I|L}TA{I|L}K[RN];{M(Oxidation (M))|F}P{I|L}TRR[RN];[YV][VP]A{I|L}K[RN];[YV]{I|L}[PG]{I|L}K[RN] 5.8572;4.3271;0.88149;0.43078 -;-;-;- 169 + 1 1.225 52691.4 1.0 11919 4992 16907 HBL1_DMSO_200M_050219_2,16913 HBL1_DMSO_200M_050219_2,16913,FPITALREI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16914 89.455 127.0 469210.0 25 0 31263.0 + 6296 DVDQQTFNHQL 11 83 672.8102759073729 1343.6059988815457 2 672.8110839724541 MULTI CID FTMS 0 0 0 16907 438746.875 0.3821526058366115 2 -0.1208877563476562 7 Unmodified _DVDQQTFNHQL_ REV__ENSG00000164946|ENST00000380880|FREM1;REV__nc|ENSG00000164946|Q5H8C1-2|FREM1 9.38312468134398 0.8308777417566128 4 [DP]{I|L}DAVGAWW{[QS]|[NT]} 12 -1 + 42.678 0.0 0.0 3.1763 3.1763 61.98 0.0 0.0 0.0 3.301882244051953 4.71726222832956 3.301882244051953 0.2815125038364385 0 0.0 0.9208187539523752 0.5387254899964358 0.0 [DP]{I|L}DAVGAWW{[QS]|[NT]};[DP]{I|L}DVAGAWW{[QS]|[NT]};{NN|[MP]|[D{I|L}]|[EV]}PDAVGAWW{[QS]|[NT]};{NN|[MP]|[D{I|L}]|[EV]}PDVAGAWW{[QS]|[NT]};[DP]{I|L}DAVQWW{[QS]|[NT]};[DP]{I|L}DVAQWW{[QS]|[NT]};[DP]{I|L}DVQAWW{[QS]|[NT]};[DV][EP]AVGAWW{[QS]|[NT]};[DV][EP]VAGAWW{[QS]|[NT]};{NN|[MP]|[D{I|L}]|[EV]}PDAVQWW{[QS]|[NT]} 3.1763;3.1554;2.9306;2.9096;2.6843;2.6633;2.6633;2.5708;2.5499;2.4385 -;-;-;-;-;-;-;-;-;- 755 1 1.225 52181.3 1.0 11920 4992 16907 HBL1_DMSO_200M_050219_2,16914 HBL1_DMSO_200M_050219_2,16914,DVDQQTFNHQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16915 89.458 190.0 373090.0 25 0 57994.0 27888 PLSLPELT 8 100 435.2523273977084 868.4901018622169 2 435.2525817751884 MULTI CID FTMS 0 0 0 16907 255626.546875 0.7692119875226672 -1 0.0895233154296875 8 Unmodified _PLSLPELT_ ENSG00000082516|ENST00000285873|GEMIN5;REV__ENSG00000114473|ENST00000265239|IQCG;REV__ENST00000463651.1_1_3:197670645-197672498:-|nuORF;REV__ENST00000480302.5_1_3:197665562-197672498:-|nuORF 34.18733598223924 0.3315367612694167 4 [{I|L}P]S{I|L} 4 4 21.675 0.0 0.0 2.4957 0.0 0.0 0.0 455.2137096105169 455.2137096105169 1.0403972069151737 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.805462187404089 0.0 + [{I|L}P]S{I|L} 2.4957 + + 235 1 1.225 57960.8 1.0 11921 4992 16907 HBL1_DMSO_200M_050219_2,16915 HBL1_DMSO_200M_050219_2,16915,PLSLPELT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16916 89.462 182.0 880130.0 25 0 185000.0 40478 VIPSGIPQA 9 107 441.2578844981137 880.5012160630274 2 441.2584106326103 MULTI CID FTMS 0 0 0 16907 248808.359375 0.1306099052578497 -3 0.264739990234375 9 Unmodified _VIPSGIPQA_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000471834.1_1_6:152657861-152688565:-|nuORF;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-7|SYNE1 28.486842064014134 0.1687311288560894 4 [{I|L}V]NV{I|L}E 6 6 43.524 0.0 0.0 4.9431 0.0 0.0 0.0 210.0887850397094 210.0887850397094 19.87894170912045 0.0 0.0 0.0 0 0.6022338482433752 0.9208187539523752 0.4916440611282626 0.4247425010840047 [{I|L}V]NV{I|L}E 4.9431 - 1104 + 1 1.225 131165.3 1.0 11922 4992 16907 HBL1_DMSO_200M_050219_2,16916 HBL1_DMSO_200M_050219_2,16916,VIPSGIPQA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16917 89.467 293.0 265820.0 25 0 29293.0 + 22105 LPPPVFQM 8 94 464.75067886505946 927.4868047969188 2 464.7518493533134 MULTI CID FTMS 0 0 0 16907 210531.234375 0.7560363961357189 7 -0.7820510864257812 10 Unmodified _LPPPVFQM_ ENSG00000173726|ENST00000366607|TOMM20;ENST00000534518.1_1_11:77024925-77025045:+|nuORF 56.04830969593885 0.114297258605095 4 [{I|L}P]PVP{M(Oxidation (M))|F}QM 8 2 + 42.462 0.0 0.0 4.5782 4.5782 67.184 0.0 0.0 0.0 6.644472778919734 10.172203223519531 6.644472778919734 0.5799194697768684 0 1.1069758080123702 1.6989700043360187 0.0 0.0 [{I|L}P]PVP{M(Oxidation (M))|F}QM;[{I|L}P]PPV{M(Oxidation (M))|F}QM;[{I|L}P]PVM{I|L}QM;[{I|L}P]PV{M(Oxidation (M))|F}PQM;[{I|L}P]{[ET]|[MV]}P{I|L}QM;[VP]PP{I|L}{M(Oxidation (M))|F}QM;[{I|L}P]{[ET]|[MV]}{I|L}PQM;[VP]PP{M(Oxidation (M))|F}{I|L}QM;[VP]P{M(Oxidation (M))|F}P{I|L}QM;{[HG]|PP}VP{I|L}{M(Oxidation (M))|F}QM 4.5782;4.5156;4.2536;4.0637;3.9821;3.8618;3.7922;3.5372;3.2126;3.1184 -;+;-;-;-;-;-;-;-;- + 340 1 1.225 61943.8 1.0 11923 4992 16907 HBL1_DMSO_200M_050219_2,16917 HBL1_DMSO_200M_050219_2,16917,LPPPVFQM True True LPPPVFQM 89.467136 464.751849353313 24583656.0 16907.0 ENST00000534518.1_1_11:77024925-77025045:+|nuORF;;ENSG00000173726|ENST00000366607|TOMM20 6.048185507456462 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16918 89.473 299.0 370670.0 25 0 12463.0 -1 0 126 957.9595865903116 1913.904620247423 2 957.9604369997978 MULTI CID FTMS 0 0 0 16907 197055.671875 0.4993453487093107 -2 0.1988372802734375 11 4 [MN]PN{I|L}NAD{[WT]|[RM]}YV{I|L}{I|L} 14 -1 64.4 0.0 0.0 3.3649 0.0 0.0 0.0 266.1148775690063 266.1148775690063 35.72805036539441 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.4247425010840047 0.7302046884880937 [MN]PN{I|L}NAD{[WT]|[RM]}YV{I|L}{I|L} 3.3649 - 6028 + 1 1.225 77788.9 1.0 11924 4992 16907 HBL1_DMSO_200M_050219_2,16918 HBL1_DMSO_200M_050219_2,16918, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16919 89.477 233.0 434630.0 25 0 44358.0 + 40445 VILEELREI 9 111 557.3296199172629 1112.6446869013257 2 557.3299438357353 MULTI CID FTMS 0 0 0 16907 198440.234375 0.9426394014574636 -1 0.0895233154296875 12 Unmodified _VILEELREI_ ENSG00000057704|ENST00000261226|TMCC3 55.50274090549119 0.0285720310785888 4 V{I|L}{I|L}EE{I|L}RE{I|L} 9 0 + 89.307 0.0 0.0 8.0266 8.0266 94.118 0.0 0.0 0.0 34.09256854528806 12.69171430892814 12.69171430892814 12.69171430892814 0 1.048455006504028 2.0 0.8494850021680094 0.3494850021680094 + + V{I|L}{I|L}EE{I|L}RE{I|L};V{I|L}{I|L}EE{I|L}[W{I|L}]V;V{I|L}D[KQ]{I|L}RE{I|L};V{I|L}{I|L}{M(Oxidation (M))|F}[R{I|L}][HC]{I|L};[{I|L}V]{I|L}EW[{I|L}V]{[QN]|[E{I|L}]|[KN]};{I|L}{I|L}VEW[{I|L}V]{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}E[R{I|L}][{I|L}V]{[QN]|[E{I|L}]|[KN]};{I|L}{I|L}{I|L}DW[{I|L}V]{[QN]|[E{I|L}]|[KN]} 8.0266;6.8859;4.9651;4.346;2.474;0.78409;0.32276;0.06416 +;-;-;-;-;-;-;- + 571 + 1 1.225 81127.3 1.0 11925 4992 16907 HBL1_DMSO_200M_050219_2,16919 HBL1_DMSO_200M_050219_2,16919,VILEELREI True True VILEELREI 89.477019 557.329943835735 1492905.375 16907.0 ENSG00000057704|ENST00000261226|TMCC3 3.447378635406494 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16920 89.481 228.0 337280.0 25 0 28412.0 + 24919 MPPGPGIPPLM 11 109 553.7911702734275 0 553.7905151247978 PEAK CID FTMS 0 0 0 16907 196464.15625 0.5555530714487823 -9 0.9154129028320312 13 Unmodified _MPPGPGIPPLM_ ENSG00000010244|ENST00000394670|ZNF207;ENST00000582705.1_1_17:30689933-30692512:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207 28.486842064014134 0.2464735685584453 4 PMPNP 5 8 28.928 0.0 0.0 2.6166 0.0 0.0 359.1895336531292 207.11382471256096 566.3033583656902 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 PMPNP 2.6166 - 248 + 1 1.225 65435.9 1.0 11926 4992 16907 HBL1_DMSO_200M_050219_2,16920 HBL1_DMSO_200M_050219_2,16920,MPPGPGIPPLM False True MPPGPGIPPLM 89.481314 553.790515124798 5277698.0 16907.0 ENSG00000010244|ENST00000394670|ZNF207;;nc|ENSG00000010244|O43670-3|ZNF207;;ENST00000582705.1_1_17:30689933-30692512:+|nuORF;;nc|ENSG00000010244|O43670-2|ZNF207;;nc|ENSG00000010244|O43670|ZNF207 5.846312363942464 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16921 89.486 250.0 394440.0 25 0 45960.0 + 35789 SVIQDFVKM 9 116 533.7840739934122 1065.5535950536243 2 533.7851440310478 MULTI CID FTMS 0 0 0 16907 197070.546875 0.6280554956894405 -2 0.1988372802734375 14 Unmodified _SVIQDFVKM_ ENSG00000163320|ENST00000482016|CGGBP1 38.17557092003332 0.0854718145212029 4 [VS]{I|L}QD{M(Oxidation (M))|F}VKM 9 0 + 65.416 0.0 0.0 6.1392 6.1392 86.218 0.0 0.0 0.0 18.820932639559388 9.950976674417715 9.950976674417715 9.208187539523747 0 0.7302046884880937 2.0 0.3494850021680094 0.3807196863200844 + + [VS]{I|L}QD{M(Oxidation (M))|F}VKM;[VS]{I|L}[AG]D{M(Oxidation (M))|F}VKM;[VS]{I|L}QYGWT{I|L};[VS]{I|L}QY[TP]KM;[VS]{I|L}QD[HT]PAV;[VS]{I|L}QD[HT]APV;[VS]V[HT]DQ{I|L}AP;[VS]{I|L}QYG[R{I|L}]M;[VS]{I|L}QY{[WT]|[RM]}AV;[VS]{I|L}[AG]Y[TP]KM 6.1392;5.275;5.2053;5.1361;4.4937;4.3886;4.3729;4.3603;4.3548;4.2719 +;-;-;-;-;-;-;-;-;- + 1027 + 1 1.225 82563.6 1.0 11927 4992 16907 HBL1_DMSO_200M_050219_2,16921 HBL1_DMSO_200M_050219_2,16921,SVIQDFVKM True True SVIQDFVKM 89.485977 533.785144031048 1970918.125 16907.0 ENSG00000163320|ENST00000482016|CGGBP1 4.510808348655701 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16923 89.491 29.0 2468400.0 25 0 265020.0 + 29243 QGWECLFI 8 94 498.2380207967248 994.4614886602496 2 498.2385131716728 MULTI CID FTMS 0 0 0 16922 1742908.625 0.9068063861662892 -1 0.0446701049804687 1 Unmodified _QGWECLFI_ ENST00000367660.3_1_6:139364265-139364322:+|nuORF 16.942295170755138 0.6606234159769251 4 {[QG]|[NA]}[C(Carbamidomethyl (C))S]V{M(Oxidation (M))|F} 6 4 21.884 0.0 0.0 2.2006 0.0 0.0 0.0 313.15031887557114 313.15031887557114 1.935749724493121 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[QG]|[NA]}[C(Carbamidomethyl (C))S]V{M(Oxidation (M))|F} 2.2006 - 133 1 1.225 61169.3 1.0 11928 4993 16922 HBL1_DMSO_200M_050219_2,16923 HBL1_DMSO_200M_050219_2,16923,QGWECLFI False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16924 89.493 121.0 446890.0 25 0 55149.0 5137 DIIEETGFVL 10 84 568.2976476350179 1134.5807423368358 2 568.2991210818291 MULTI CID FTMS 0 0 0 16922 203725.5625 0.4676652134068153 2 -0.1756515502929687 2 Unmodified _DIIEETGFVL_ ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF 20.453626601364224 0.5043500229302764 4 {NN|[MP]|[D{I|L}]|[EV]}N[WQ]T{M(Oxidation (M))|F}{I|L}V 9 6 + 52.457 0.0 0.0 4.6235 4.6235 73.784 0.0 0.0 0.0 4.036757287974666 16.478174818886373 4.036757287974666 4.036757287974666 0 0.4247425010840047 1.0969100130080565 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}N[WQ]T{M(Oxidation (M))|F}{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[HM]T{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}GG[WQ]T{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}N[YK]{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}GG[YK]{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}[KG][YG]{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.6235;4.2677;3.8119;1.5751;0.76346;0.1474 -;-;-;-;-;- 134 1 1.225 45815.4 1.0 11929 4993 16922 HBL1_DMSO_200M_050219_2,16924 HBL1_DMSO_200M_050219_2,16924,DIIEETGFVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16925 89.498 245.0 199940.0 25 0 33055.0 + 15648 IQLDRFSGL 9 94 524.7935825171246 1047.5726121010491 2 524.7938110232353 MULTI CID FTMS 0 0 0 16922 161599.296875 0.1010551961693285 -3 0.2435073852539062 3 Unmodified _IQLDRFSGL_ REV__ENSG00000106714|ENST00000297668|CNTNAP3;REV__ENSG00000154529|ENST00000377561|CNTNAP3B;REV__ENST00000435173.1_9:65585783-65602755:+|nuORF;REV__nc|ENSG00000283378|Q9BZ76-2|CNTNAP3 18.13498045792455 0.3457906370836843 4 KG{I|L} 3 -1 21.427 0.0 0.0 2.0454 0.0 0.0 731.361352190696 0.0 731.361352190696 0.0 8.883667301712372 0.0 0.0 0 0.0 0.0 0.0 0.0 KG{I|L} 2.0454 - 110 + 1 1.225 44357.7 1.0 11930 4993 16922 HBL1_DMSO_200M_050219_2,16925 HBL1_DMSO_200M_050219_2,16925,IQLDRFSGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16926 89.502 223.0 93968.0 25 0 10398.0 2015 APDSAGQPPAL 11 53 512.2608326759334 1022.5071124186668 2 512.2614013552666 MULTI CID FTMS 0 0 0 16922 150611.796875 1.0 0 0.0 4 Unmodified _APDSAGQPPAL_ ENSG00000182087|ENST00000356663|TMEM259;ENST00000592618.5_1_19:1010351-1011343:-|nuORF 6.723162845929126 0.8434276150410019 4 {I|L} 1 10 12.218 0.0 0.0 1.195 0.0 0.0 891.412139739759 0.0 891.412139739759 0.0 2.03742663289134 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.195 + + 9 + 1 1.225 23026.5 1.0 11931 4993 16922 HBL1_DMSO_200M_050219_2,16926 HBL1_DMSO_200M_050219_2,16926,APDSAGQPPAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16927 89.51 423.0 161650.0 25 0 22481.0 + 23556 LTLSDTEDSL 10 119 547.2663040776981 1092.5180552221962 2 548.7614623904228 MULTI CID FTMS 0 0 0 16922 125544.65625 0.3444661974298209 7 -0.7903213500976562 5 Unmodified _LTLSDTEDSL_ ENSG00000090539|ENST00000204604|CHRD;ENST00000470150.5_1_3:184098136-184100834:+|nuORF;nc|ENSG00000090539|Q9H2X0-4|CHRD;nc|ENSG00000090539|Q9H2X0-5|CHRD 10.823927491677226 0.6659270209832991 4 [KT]V{M(Oxidation (M))|F}{[YC]|[HE]}W{M(Oxidation (M))|F} 8 8 + 21.604 0.0 0.0 1.9774 1.9774 62.761 0.0 0.0 0.0 2.153500133247732 1.5949199723621952 1.5949199723621952 1.5949199723621952 0 0.0 0.0 0.0 0.0 [KT]V{M(Oxidation (M))|F}{[YC]|[HE]}W{M(Oxidation (M))|F};[KT]V{M(Oxidation (M))|F}{[YC]|[HE]}{M(Oxidation (M))|F}SV;[KT]{M(Oxidation (M))|F}V{[YC]|[HE]}W{M(Oxidation (M))|F};[KT]{M(Oxidation (M))|F}V{[YC]|[HE]}{M(Oxidation (M))|F}SV;[KT]V{[ES]|[DT]|[{I|L}C]}E[C(Carbamidomethyl (C))Q]{I|L};[KT]{M(Oxidation (M))|F}[PA]E[C(Carbamidomethyl (C))Q]{I|L} 1.9774;1.8315;1.7019;1.5559;0.85413;0.57859 -;-;-;-;-;- 293 + 1 1.225 63786.6 1.0 11932 4993 16922 HBL1_DMSO_200M_050219_2,16927 HBL1_DMSO_200M_050219_2,16927,LTLSDTEDSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16928 89.519 539.0 244860.0 25 0 16207.0 9365 FIPLPSAVVQA 11 142 571.3339714053425 1140.6533898774849 2 571.3345825076103 MULTI CID FTMS 0 0 0 16922 125801.1875 0.3471981581835953 -3 0.2435073852539062 6 Unmodified _FIPLPSAVVQA_ ENSG00000100445|ENST00000399395|SDR39U1;nc|ENSG00000100445|Q9NRG7-3|SDR39U1 26.268140514670165 0.4754186812857754 4 [VG]AV{I|L}PVD{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 11 9 + 35.347 0.0 0.0 3.0988 3.0988 67.098 0.0 0.0 0.0 13.295514893107011 5.862435673934282 5.862435673934282 3.0102999566398125 0 0.0 1.6989700043360187 0.0 0.0 [VG]AV{I|L}PVD{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[VG]G{I|L}{I|L}PVD{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[VG]A{I|L}VPVD{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[VG][TP]{I|L}PVS{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[VG][TP]P{I|L}VS{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[VA]|[{I|L}G]}K{I|L}C(Carbamidomethyl (C))V{I|L}P{[QN]|[E{I|L}]|[KN]};[AG]VV{I|L}PVD{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{I|L}P][PS]AVVS{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{I|L}{I|L}NVPVD{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[PS][{I|L}P]AVVS{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 3.0988;2.8349;2.8349;2.5106;2.4256;1.9332;1.9191;1.9098;1.817;1.7859 -;-;-;-;-;-;-;-;-;- 1800 1 1.225 105083.9 1.0 11933 4993 16922 HBL1_DMSO_200M_050219_2,16928 HBL1_DMSO_200M_050219_2,16928,FIPLPSAVVQA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16929 89.525 332.0 257950.0 25 0 37365.0 -1 SLIFSCGPV 9 108 490.2502261236477 978.4858993140956 2 490.2500488162041 MULTI CID FTMS 0 0 0 16922 118041.109375 0.5675878793670714 -2 0.1341934204101562 7 Carbamidomethyl (C) _SLIFSC(Carbamidomethyl (C))GPV_ ENST00000257013.8_1_X:134167023-134167440:+|nuORF 16.942295170755138 0.3780752226737986 4 {[TV]|[{I|L}S]}{I|L}G{I|L}V 6 -1 28.333 0.0 0.0 2.8956 0.0 0.0 0.0 393.0908069307093 393.0908069307093 11.95764043784187 0.0 0.0 0.0 0 0.1677353201839438 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}G{I|L}V 2.8956 - 523 + 1 1.225 68326.0 1.0 11934 4993 16922 HBL1_DMSO_200M_050219_2,16929 HBL1_DMSO_200M_050219_2,16929,SLIFSCGPV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16930 89.539 800.0 245370.0 25 0 14987.0 + 32332 RYLYMVMEY 9 160 634.2953852947381 1266.5762176562762 2 634.2971069216728 MULTI CID FTMS 0 0 0 16922 107056.609375 0.5663791189360745 -1 0.0446701049804687 8 Unmodified _RYLYMVMEY_ ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2;ENST00000582445.1_1_18:18625251-18629157:-|nuORF 52.268347100219714 0.0353964759249114 4 {[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}VDVMEY 10 5 + 58.463 0.0 0.0 4.6158 4.6158 71.05 0.0 0.0 0.0 2.632414347745815 16.53212513775344 2.632414347745815 2.632414347745815 0 0.9247425010840048 0.585026652029182 0.0 0.6989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}VDVMEY;[Q{I|L}]RDVDVMEY;{[TV]|[{I|L}S]}[HT][C(Carbamidomethyl (C))K]VMEY;[QP]KG{[QG]|[NA]}MVMEY;[{I|L}T][HS][C(Carbamidomethyl (C))K]VMEY;{[TV]|[{I|L}S]}[PG]{[SA]|[TG]}VDVMEY;{[QV]|[N{I|L}]|[RA]|[KV]}PN[C(Carbamidomethyl (C))K]VMEY;{[QV]|[N{I|L}]|[RA]|[KV]}P[RD]MVMEY;[QP]VN[C(Carbamidomethyl (C))K]VMEY;[QP]V[RD]MVMEY 4.6158;4.408;4.3617;4.3439;4.2395;4.1838;4.1405;4.1307;4.0149;4.0052 -;-;-;-;-;-;-;-;-;- 2189 1 1.225 149895.0 0.6000000238418579 11935 4993 16922 HBL1_DMSO_200M_050219_2,16930 HBL1_DMSO_200M_050219_2,16930,RYLYMVMEY True True RYLYMVMEY 89.538947 634.297106921673 1533173.875 16922.0 ENSG00000134318|ENST00000315872|ROCK2;;ENST00000582445.1_1_18:18625251-18629157:-|nuORF;;ENSG00000067900|ENST00000399799|ROCK1 7.153283596038818 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16931 89.549 544.0 185220.0 25 0 4953.7 -1 0 126 967.4585415539024 1932.9025301746044 2 967.4644653201104 MULTI CID FTMS 0 0 0 16922 96349.25 0.9932697973336272 -2 0.1341934204101562 9 4 [MN]PN{I|L}DAD{[NV]|[RG]}TVTN{I|L}C{[TV]|[{I|L}S]} 18 -1 + 97.847 0.0 0.0 5.0622 5.0622 69.397 0.0 0.0 0.0 37.91347686685162 4.186296826174996 4.186296826174996 0.7389623789005384 0 0.5752574989159953 1.6989700043360187 1.0356668758921828 2.613364334130467 [MN]PN{I|L}DAD{[NV]|[RG]}TVTN{I|L}C{[TV]|[{I|L}S]};[MN]PN{I|L}DAD{[NV]|[RG]}TV[CS]{I|L}Q{[TV]|[{I|L}S]};[MN]PN{I|L}DAD{[NV]|[RG]}TVT{[DS]|[MA]|[CV]|TT}Q{[TV]|[{I|L}S]};[MN]PN{I|L}WD{[NV]|[RG]}TVTN{I|L}C{[TV]|[{I|L}S]};[MN]PN{I|L}WD{[NV]|[RG]}TV[CS]{I|L}Q{[TV]|[{I|L}S]};[MN]PN{I|L}WD{[NV]|[RG]}TVT{[DS]|[MA]|[CV]|TT}Q{[TV]|[{I|L}S]};[MN]PN{I|L}DW{[NV]|[RG]}TVTN{I|L}C{[TV]|[{I|L}S]};[MN]PN{I|L}DW{[NV]|[RG]}TV[CS]{I|L}Q{[TV]|[{I|L}S]};[MN]PN{I|L}DADQGEVT{[DS]|[MA]|[CV]|TT}Q{[TV]|[{I|L}S]};[MN]PN{I|L}DW{[NV]|[RG]}TVT{[DS]|[MA]|[CV]|TT}Q{[TV]|[{I|L}S]} 5.0622;5.0239;4.9509;4.8691;4.8309;4.7579;4.7134;4.6752;4.6411;4.6022 -;-;-;-;-;-;-;-;-;- 54090 + 1 1.225 75291.4 1.0 11936 4993 16922 HBL1_DMSO_200M_050219_2,16931 HBL1_DMSO_200M_050219_2,16931, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16932 89.562 800.0 120030.0 25 0 4045.6 -1 0 95 1193.549331174675 3577.6261641242254 3 1193.887377917767 MULTI CID FTMS 0 0 0 16922 83015.5234375 0.2171452286885777 -3 0.2435073852539062 10 4 VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 14 -1 43.084 0.0 0.0 1.2043 0.0 0.0 1947.9140352667496 0.0 1947.9140352667496 0.0 12.734688968278611 0.0 0.0 0 0.0 0.0 0.0 0.5774509799928715 VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.2043 - 6564 + 1 1.225 66862.8 0.4900000095367431 11937 4993 16922 HBL1_DMSO_200M_050219_2,16932 HBL1_DMSO_200M_050219_2,16932, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16934 89.567 38.0 1589200.0 25 0 156740.0 + 30871 RIMPEDIIINC 11 53 658.8383590219412 1315.6621651106825 2 658.8392822146416 MULTI CID FTMS 0 0 0 16933 1379078.875 0.8520876110983161 1 -0.0994338989257812 1 Unmodified _RIMPEDIIINC_ ENSG00000198900|ENST00000361337|TOP1 24.881564428377168 0.5079759154518888 4 {I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]} 5 6 30.713 0.0 0.0 2.3344 0.0 0.0 741.3487519113914 0.0 741.3487519113914 0.0 16.448565749036064 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + {I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]} 2.3344 + + 23 1 1.225 54299.1 1.0 11938 4994 16933 HBL1_DMSO_200M_050219_2,16934 HBL1_DMSO_200M_050219_2,16934,RIMPEDIIINC False True RIMPEDIIINC 89.567178 658.839282214642 25652944.0 16933.0 ENSG00000198900|ENST00000361337|TOP1 4.05124028523763 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16935 89.568 43.0 1177000.0 25 0 86107.0 + 45077 YPYHYAPFL 9 78 585.7845945966401 1169.55463626008 2 585.7855102419853 MULTI CID FTMS 0 0 0 16933 996401.4375 0.9956237309131905 1 -0.0994338989257812 2 Unmodified _YPYHYAPFL_ ENSG00000114127|ENST00000392981|XRN1;ENST00000472697.5_1_3:142095319-142144369:-|nuORF;nc|ENSG00000114127|Q8IZH2|XRN1 45.7499826716795 0.0496882803020414 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HYAYP{M(Oxidation (M))|F}{I|L} 9 2 + 56.749 0.0 0.0 4.8522 4.8522 75.997 0.0 0.0 0.0 12.703037561203844 16.650378042405904 12.703037561203844 5.0 0 0.8182503180159344 1.3979400086720375 0.3494850021680094 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HYAYP{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HYAPY{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HYYAP{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}PYAYP{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}YPAYP{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}PYYAP{M(Oxidation (M))|F}{I|L};[YN]WPAYP{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}YPYAP{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}YPAPY{M(Oxidation (M))|F}{I|L};{[WN]|[YH]}PYAPY{M(Oxidation (M))|F}{I|L} 4.8522;4.4247;4.1454;3.7661;3.7661;3.3581;3.3581;3.3581;3.3385;3.3385 -;-;-;-;-;-;-;-;-;- 526 1 1.225 45479.8 1.0 11939 4994 16933 HBL1_DMSO_200M_050219_2,16935 HBL1_DMSO_200M_050219_2,16935,YPYHYAPFL True True YPYHYAPFL 89.568397 585.785510241985 22873942.0 16933.0 nc|ENSG00000114127|Q8IZH2|XRN1;;ENSG00000114127|ENST00000392981|XRN1;;ENST00000472697.5_1_3:142095319-142144369:-|nuORF 6.833551088968913 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16936 89.571 118.0 760620.0 25 0 60546.0 + 35439 STLHLVLRL 9 93 351.2257507279637 1050.6554227840911 3 351.2255432009697 MULTI CID FTMS 0 0 0 16933 560956.0625 0.0276875411458722 -2 0.1208877563476562 3 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 61.357469665136826 0.0253304979873734 4 {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}] 9 0 + 54.033 0.0 0.0 5.1428 5.1428 78.853 0.0 0.0 0.0 28.970996953088388 14.564083326475128 14.564083326475128 6.505149978319906 0 0.6237125054200234 0.0 0.0 0.8921590589602533 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}];{[MG]|[TS]}{I|L}{I|L}HV{I|L}[R{I|L}];{[MG]|[TS]}{I|L}H{I|L}{I|L}V[R{I|L}];{[MG]|[TS]}{I|L}{I|L}H{I|L}V[R{I|L}] 5.1428;4.5236;4.4398;3.8207 +;-;-;- + 142 + 1 1.225 78937.1 1.0 11940 4994 16933 HBL1_DMSO_200M_050219_2,16936 HBL1_DMSO_200M_050219_2,16936,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16937 89.574 141.0 901220.0 25 0 69833.0 + 35446 STLHLVLRL 9 94 526.3345197990178 1050.6544866648355 2 526.3350097537041 MULTI CID FTMS 0 0 0 16933 440228.40625 0.0245749103034576 -2 0.1208877563476562 4 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 88.95385435242217 0.0153473310052057 4 {I|L}STH{I|L}V{I|L}R{I|L} 9 2 + 74.145 0.0 0.0 7.057 7.057 76.367 0.0 0.0 0.0 0.3171830909637521 25.12553968976347 0.3171830909637521 0.3171830909637521 0 1.9124379954164592 0.0 0.4247425010840047 1.2971062485323517 {I|L}STH{I|L}V{I|L}R{I|L};{[MG]|[TS]}{I|L}H{I|L}V{I|L}R{I|L};{I|L}STH{I|L}{I|L}VR{I|L};{[MG]|[TS]}{I|L}H{I|L}{I|L}VR{I|L};{I|L}ST{I|L}HV{I|L}R{I|L};{[MG]|[TS]}{I|L}{I|L}HV{I|L}R{I|L};{I|L}ST{I|L}H{I|L}VR{I|L};{[MG]|[TS]}{I|L}{I|L}H{I|L}VR{I|L};[H{I|L}]{[MG]|[TS]}{I|L}V{I|L}R{I|L};{I|L}STH{I|L}{I|L}[R{I|L}]V 7.057;7.0268;6.4039;6.3737;6.2946;6.2644;5.6415;5.6113;5.0036;4.4469 -;+;-;-;-;-;-;-;-;- + 294 + 1 1.225 101791.5 1.0 11941 4994 16933 HBL1_DMSO_200M_050219_2,16937 HBL1_DMSO_200M_050219_2,16937,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16938 89.576 82.0 1373400.0 25 0 111360.0 -1 VNLLTTCST 9 103 504.7561861445312 1007.4978193558624 2 504.7561523318291 MULTI CID FTMS 0 0 0 16933 446987.3125 0.0962549127468594 -1 0.0762176513671875 5 Carbamidomethyl (C) _VNLLTTC(Carbamidomethyl (C))ST_ ENSG00000115307|ENST00000377526|AUP1;ENST00000463900.5_1_2:74756150-74756756:-|nuORF;nc|ENSG00000115307|Q9Y679-3|AUP1 28.486842064014134 0.1687311288560894 4 AVRD[HC]{I|L}N 8 -1 55.618 0.0 0.0 5.5204 0.0 0.0 0.0 96.04605280093983 96.04605280093983 30.93518049445001 0.0 0.0 0.0 0 0.6022338482433752 1.0457574905606752 0.6989700043360187 1.0010912013506126 AVRD[HC]{I|L}N 5.5204 - 547 + 1 1.225 88859.3 1.0 11942 4994 16933 HBL1_DMSO_200M_050219_2,16938 HBL1_DMSO_200M_050219_2,16938,VNLLTTCST False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16939 89.58 248.0 388210.0 25 0 120600.0 + 2962 AVIDRFLRL 9 75 368.2289943409551 1101.6651536230652 3 368.2287475466728 MULTI CID FTMS 0 0 0 16933 401830.6875 0.8139895800376097 1 -0.0994338989257812 6 Unmodified _AVIDRFLRL_ ENSG00000132313|ENST00000337109|MRPL35;nc|ENSG00000132313|Q9NZE8-2|MRPL35 16.565877749689598 0.3882643987948875 4 AV{I|L}D{I|L}G 6 4 64.641 0.0 0.0 5.8676 0.0 0.0 0.0 530.3123676755887 530.3123676755887 52.65153777800478 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 AV{I|L}D{I|L}G 5.8676 - 58 + 1 1.225 83718.3 1.0 11943 4994 16933 HBL1_DMSO_200M_050219_2,16939 HBL1_DMSO_200M_050219_2,16939,AVIDRFLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16940 89.588 420.0 302550.0 25 0 55334.0 + 8155 EPPAVLLL 8 115 426.26472362634 850.51489431948 2 426.2646057009697 MULTI CID FTMS 0 0 0 16933 264245.34375 0.7584073845928655 5 -0.661163330078125 7 Unmodified _EPPAVLLL_ ENSG00000133101|ENST00000255465|CCNA1;nc|ENSG00000133101|P78396-2|CCNA1;nc|ENSG00000133101|P78396|CCNA1 30.22481116460888 0.4082965392918993 4 [EP]PA{I|L}V{I|L}{I|L} 8 2 + 32.585 0.0 0.0 3.8312 3.8312 66.128 0.0 0.0 0.0 1.4916623986031396 9.018637558036673 1.4916623986031396 1.4916623986031396 0 0.6989700043360187 0.0 0.5752574989159953 0.0 [EP]PA{I|L}V{I|L}{I|L};{[HG]|PP}EA{I|L}V{I|L}{I|L};[EP]PAV{I|L}{I|L}{I|L};{[HG]|PP}EAV{I|L}{I|L}{I|L};[VP][DV]PV{I|L}{I|L};[EP]AP{I|L}V{I|L}{I|L};[EP]PA{I|L}{I|L}V{I|L};[EP]APV{I|L}{I|L}{I|L};[EP]A{I|L}PV{I|L}{I|L};{[HG]|PP}EA{I|L}{I|L}V{I|L} 3.8312;3.6559;3.4773;3.3019;3.1549;2.9763;2.7709;2.6224;2.6224;2.5955 -;-;+;-;-;-;-;-;-;- + 205 1 1.225 102555.4 1.0 11944 4994 16933 HBL1_DMSO_200M_050219_2,16940 HBL1_DMSO_200M_050219_2,16940,EPPAVLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16941 89.59 144.0 399740.0 25 0 58193.0 + 14208 IDLCMQMGI 9 85 512.2389380425918 1022.4633231519836 2 512.2392455935478 MULTI CID FTMS 0 0 0 16933 202041.75 0.5444447625704204 -2 0.1208877563476562 8 Unmodified _IDLCMQMGI_ ENSG00000151572|ENST00000392977|ANO4;nc|ENSG00000151572|Q32M45-2|ANO4;nc|ENSG00000151572|Q32M45-3|ANO4 12.531546534597751 0.4974689918368763 4 {I|L} 1 8 13.979 0.0 0.0 1.3672 0.0 0.0 891.3682284027633 0.0 891.3682284027633 0.0 2.877334204436579 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3672 + + 58 + 1 1.225 47673.3 1.0 11945 4994 16933 HBL1_DMSO_200M_050219_2,16941 HBL1_DMSO_200M_050219_2,16941,IDLCMQMGI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16942 89.598 405.0 196260.0 25 0 18494.0 + 30110 QVIQDLVVSV 10 122 550.3216747925628 1098.6287966519255 2 550.3217040896416 MULTI CID FTMS 0 0 0 16933 179954.625 1.0 0 0.0 9 Unmodified _QVIQDLVVSV_ ENSG00000197563|ENST00000640252|PIGN 78.7280429016045 0.0181102348768482 4 {[QV]|[N{I|L}]|[RA]|[KV]}EVQ{I|L}V 7 6 64.892 0.0 0.0 5.9066 0.0 0.0 0.0 300.15624822244166 300.15624822244166 35.90727145291018 0.0 0.0 0.0 0 0.4247425010840047 1.0457574905606752 1.4291746928241125 1.0189301784845295 {[QV]|[N{I|L}]|[RA]|[KV]}EVQ{I|L}V 5.9066 - 2464 1 1.225 66239.3 1.0 11946 4994 16933 HBL1_DMSO_200M_050219_2,16942 HBL1_DMSO_200M_050219_2,16942,QVIQDLVVSV True True QVIQDLVVSV 89.597743 550.321704089642 1132640.75 16933.0 ENSG00000197563|ENST00000640252|PIGN 5.9683834711710615 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16943 89.604 334.0 328580.0 25 0 36833.0 + + 15096 FPYEGPLRL 9 131 546.2983648025329 0 546.2979614138603 PEAK CID FTMS 0 0 0 16933 168259.453125 1.0 0 0.0 10 Carbamidomethyl (C) _IMLTC(Carbamidomethyl (C))ILDL_ ENSG00000169660|ENST00000327949|HEXD;nc|ENSG00000169660|Q8WVB3-2|HEXD 44.40701690623563 0.0469661192146891 4 VPPK{M(Oxidation (M))|F}M 6 -1 18.067 0.0 0.0 1.6566 0.0 0.0 147.0679402796846 241.0987337701781 388.1666740498628 0.0 0.0 0.0 0.0 0 0.6462566630072955 0.0 0.0 0.0 VPPK{M(Oxidation (M))|F}M 1.6566 - 315 + 1 1.225 90528.1 1.0 11947 4994 16933 HBL1_DMSO_200M_050219_2,16943 HBL1_DMSO_200M_050219_2,16943,IMLTCILDL False False FPYEGPLRL 89.603804 546.29796141386 2044998.125 16933.0 ENSG00000169660|ENST00000327949|HEXD;;nc|ENSG00000169660|Q8WVB3-2|HEXD 3.5225014686584477 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16944 89.618 800.0 267910.0 25 0 28393.0 11429 GGVLCSVSTVS 11 170 336.8396439143945 1007.4971023433836 3 336.8394958376884 MULTI CID FTMS 0 0 0 16933 127296.2265625 0.0737117051852626 -1 0.0762176513671875 11 Unmodified _GGVLCSVSTVS_ chr16:28936201-28936280|38|13.03|0.29|5.49|+|2|TE_info:L2b,L2b_dup80525,L2,LINE,acceptor,+,28936280,28936367|CD19,None|2 18.1463463914782 0.6576820063886638 4 NV{I|L}D 4 9 58.383 0.0 0.0 5.7948 0.0 0.0 0.0 563.2518468548571 563.2518468548571 39.69821233459277 0.0 0.0 0.0 0 0.1923877696554315 1.6989700043360187 1.2302046884880935 0.0 NV{I|L}D 5.7948 - 263 + 1 1.225 170487.4 0.4699999988079071 11948 4994 16933 HBL1_DMSO_200M_050219_2,16944 HBL1_DMSO_200M_050219_2,16944,GGVLCSVSTVS False False False False TE_chimeric_transcript PXD020620_cell_line HBL1_DMSO_200M_050219_2 16945 89.631 800.0 441230.0 25 0 90475.0 -1 0 107 989.531886166459 1977.049219399718 2 989.5316650271416 MULTI CID FTMS 0 0 0 16933 117690.953125 0.3106053352117559 -2 0.1208877563476562 12 4 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN{I|L}V 8 -1 60.685 0.0 0.0 3.0695 0.0 0.0 0.0 1093.5233516135072 1093.5233516135072 25.32828495690552 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.8296896906561031 1.6549471895720984 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN{I|L}V 3.0695 - 21238 1 1.225 227070.2 0.6499999761581421 11949 4994 16933 HBL1_DMSO_200M_050219_2,16945 HBL1_DMSO_200M_050219_2,16945, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16946 89.645 800.0 98868.0 25 0 7682.0 -1 0 109 606.9675200118297 1817.880730635689 3 606.9674560427666 MULTI CID FTMS 0 0 0 16933 113381.5703125 1.0 0 0.0 13 4 Y{I|L}[HA]KYS{I|L} 8 -1 30.195 0.0 0.0 1.661 0.0 0.0 824.3526201625242 0.0 824.3526201625242 0.0 15.203259128716873 0.0 0.0 0 0.0 0.0 0.75 0.0 Y{I|L}[HA]KYS{I|L} 1.661 - 1131 + 1 1.225 65640.2 0.6200000047683716 11950 4994 16933 HBL1_DMSO_200M_050219_2,16946 HBL1_DMSO_200M_050219_2,16946, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16947 89.652 291.0 570540.0 25 0 56812.0 -1 0 100 982.5531882243698 0 982.5468017458916 PEAK CID FTMS 0 0 0 -1 0 14 4 AVHNV{I|L}E 7 -1 36.987 0.0 0.0 1.8841 0.0 0.0 987.5985925563888 210.0887697809204 1197.6873623373092 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.031234684152075 AVHNV{I|L}E 1.8841 - 9241 + 1 1.225 112285.5 1.0 11951 4994 16933 HBL1_DMSO_200M_050219_2,16947 HBL1_DMSO_200M_050219_2,16947, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16948 89.662 567.0 550630.0 25 0 88493.0 + 11747 GLIGPNPAIT 10 146 476.7764814140849 0 476.7773925662041 PEAK CID FTMS 0 0 0 16933 97053.6171875 0.6285919647826747 -1 0.0762176513671875 15 Unmodified _GLIGPNPAIT_ REV__ENST00000589123.5_2_19:3466364-3466592:+|nuORF 29.081581746732265 0.2251250799338715 4 {I|L}{I|L}NVE 5 -1 40.918 0.0 0.0 4.3002 0.0 0.0 170.0988334979407 210.0889681451781 380.18780164311886 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5484550065040282 1.3494850021680094 {I|L}{I|L}NVE 4.3002 - 1211 + 1 1.225 236713.2 1.0 11952 4994 16933 HBL1_DMSO_200M_050219_2,16948 HBL1_DMSO_200M_050219_2,16948,GLIGPNPAIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16950 89.666 12.0 3999200.0 25 0 429360.0 + 22380 LPSSLYLKI 9 68 517.3181254860068 1032.6216980388135 2 517.3185302615166 MULTI CID FTMS 0 0 0 16949 3702115.25 1.0 0 0.0 1 Unmodified _LPSSLYLKI_ ENSG00000111371|ENST00000398637|SLC38A1;ENST00000548979.1_1_12:46591442-46591783:-|nuORF 69.10491478415734 0.0214449631113747 4 {I|L}PSS{I|L}Y{I|L}K{I|L} 9 0 + 93.471 0.0 0.0 9.0518 9.0518 97.182 0.0 0.0 0.0 69.04737847600778 12.587418566968154 12.587418566968154 21.694699959806982 0 1.305462187404089 2.0 0.0 0.2614393726401688 + + {I|L}PSS{I|L}Y{I|L}K{I|L};{I|L}P{[WT]|[RM]}Y{I|L}K{I|L};{I|L}EAA{I|L}Y{I|L}K{I|L} 9.0518;6.9509;4.9305 +;-;- + 233 + 1 1.225 43844.5 1.0 11953 4995 16949 HBL1_DMSO_200M_050219_2,16950 HBL1_DMSO_200M_050219_2,16950,LPSSLYLKI True True LPSSLYLKI 89.666388 517.318530261517 27911014.0 16949.0 ENSG00000111371|ENST00000398637|SLC38A1;;ENST00000548979.1_1_12:46591442-46591783:-|nuORF 5.3489195505778 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16951 89.668 42.0 1299800.0 25 0 259480.0 + 30644 RFPDFVRDF 9 63 599.8039573542546 1197.5933617753092 2 599.8041869997978 MULTI CID FTMS 0 0 0 16949 892165.875 0.3435191537446589 2 -0.2928924560546875 2 Unmodified _RFPDFVRDF_ ENSG00000213339|ENST00000250237|QTRT1;ENST00000587500.5_1_19:10823370-10823943:+|nuORF 27.088373467376528 0.1865245257266215 4 {M(Oxidation (M))|F}[DP]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F} 8 1 46.024 0.0 0.0 3.843 0.0 0.0 156.10135085273595 0.0 156.10135085273595 0.0 25.05449080957064 0.0 0.0 0 1.805462187404089 0.0 0.0 0.0 + {M(Oxidation (M))|F}[DP]{M(Oxidation (M))|F}VRD{M(Oxidation (M))|F} 3.843 + + 74 1 1.225 44870.4 1.0 11954 4995 16949 HBL1_DMSO_200M_050219_2,16951 HBL1_DMSO_200M_050219_2,16951,RFPDFVRDF False True RFPDFVRDF 89.667586 599.804186999798 50369727.0 16949.0 ENST00000587500.5_1_19:10823370-10823943:+|nuORF;;ENSG00000213339|ENST00000250237|QTRT1 7.916952292124431 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16952 89.669 23.0 2576800.0 25 0 337220.0 + 41117 VNSGYGLLLG 10 73 496.7730111821314 991.5314694310628 2 496.7730590701103 MULTI CID FTMS 0 0 0 16949 3951405.75 1.0 0 0.0 3 Unmodified _VNSGYGLLLG_ REV__ENSG00000154175|ENST00000471714|ABI3BP;REV__ENST00000475896.5_1_3:100583650-100712249:-|nuORF;REV__nc|ENSG00000154175|Q7Z7G0|ABI3BP 15.248480904072842 0.5916873121453583 4 {[NV]|[RG]}{I|L}W[YQ]VA 8 -1 + 28.99 0.0 0.0 2.9237 2.9237 78.304 0.0 0.0 0.0 14.366903183326514 6.665543185820226 6.665543185820226 19.83024731214847 0 1.2614393726401687 0.0 0.0 0.0 {[NV]|[RG]}{I|L}W[YQ]VA;{[ES]|[DT]|[{I|L}C]}[QP][HK]PVA 2.9237;0.92376 -;- 86 + 1 1.225 48738.4 1.0 11955 4995 16949 HBL1_DMSO_200M_050219_2,16952 HBL1_DMSO_200M_050219_2,16952,VNSGYGLLLG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16953 89.67 18.0 3661200.0 25 0 297310.0 + 29726 QPLPVILHV 9 85 508.31861358773176 1014.6226742422637 2 508.3187133669853 MULTI CID FTMS 0 0 0 16949 2393472.75 0.2462395191407495 -2 0.1756515502929687 4 Unmodified _QPLPVILHV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 34.18733598223924 0.1073653526364521 4 [QP]{I|L}PV{I|L}{I|L}VH 9 2 + 47.669 0.0 0.0 4.6982 4.6982 73.972 0.0 0.0 0.0 5.642492736872597 3.979400086720375 3.979400086720375 3.979400086720375 0 0.3054621874040891 0.0 0.0 0.0 [QP]{I|L}PV{I|L}{I|L}VH;[QP]{I|L}PV{I|L}{I|L}HV;[QP]{I|L}PV{I|L}[HV]{I|L} 4.6982;4.306;3.0028 -;+;- + 181 + 1 1.225 56410.0 1.0 11956 4995 16949 HBL1_DMSO_200M_050219_2,16953 HBL1_DMSO_200M_050219_2,16953,QPLPVILHV True True QPLPVILHV 89.669942 508.318713366985 300404544.0 16949.0 nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;;ENSG00000171681|ENST00000261168|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;;ENST00000537653.5_1_12:14576849-14628955:+|nuORF 6.398479620615642 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16954 89.671 41.0 1661000.0 25 0 203040.0 + 36345 SYPDNFLHI 9 92 553.26928076382 1104.52400859444 2 553.2697021365166 MULTI CID FTMS 0 0 0 16949 827714.0 0.3119356813599065 -1 0.0994338989257812 5 Unmodified _SYPDNFLHI_ ENSG00000057663|ENST00000369076|ATG5;nc|ENSG00000057663|Q9H1Y0-2|ATG5 25.399314129420983 0.2080152500878129 4 [DP]N{M(Oxidation (M))|F}{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]} 9 4 + 35.687 0.0 0.0 3.231 3.231 77.416 0.0 0.0 0.0 12.803695511246984 4.762036441594191 4.762036441594191 12.095442439488108 0 0.0 1.0457574905606752 0.0 0.2887254899964357 [DP]N{M(Oxidation (M))|F}{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[DP]GG{M(Oxidation (M))|F}{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[TV]|[{I|L}S]}[MN]{I|L}[QA]P[MT];YY{M(Oxidation (M))|F}{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]};[HM]{I|L}H{I|L}[HN]{[CT]|[{M(Oxidation (M))|F}G]};{[QN]|[E{I|L}]|[KN]}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}H{I|L}{[{M(Oxidation (M))|F}C]|[YS]};{[{M(Oxidation (M))|F}C]|[YS]}PD[VS]P[{I|L}P]M;{[{M(Oxidation (M))|F}C]|[YS]}P[RK][HN]{[CT]|[{M(Oxidation (M))|F}G]};{[QN]|[E{I|L}]|[KN]}{[QC]|[C(Carbamidomethyl (C))A]}[RK]P[MT];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[DA]|[EG]}{I|L}[QA]P[MT] 3.231;2.1359;2.0717;2.0691;1.4919;1.401;1.3501;0.83037;0.73949;0.022684 -;-;-;-;-;-;-;-;-;- 224 1 1.225 58593.2 1.0 11957 4995 16949 HBL1_DMSO_200M_050219_2,16954 HBL1_DMSO_200M_050219_2,16954,SYPDNFLHI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16955 89.673 73.0 846930.0 25 0 125880.0 + 18303 KVLDILQHI 9 88 539.8346054124613 1077.6546578917223 2 539.8347045779228 MULTI CID FTMS 0 0 0 16949 735061.8125 0.6086928416392045 1 -0.1378707885742187 6 Unmodified _KVLDILQHI_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 81.9152076656658 0.0170527153246128 4 KV{I|L}D{I|L}{I|L}QH{I|L} 9 0 + 110.08 0.0 0.0 10.215 10.215 97.101 0.0 0.0 0.0 71.58900166109908 10.597718523607966 10.597718523607966 16.510234424404686 0 3.249134866972623 0.9208187539523752 0.4247425010840047 0.7302046884880937 + + KV{I|L}D{I|L}{I|L}QH{I|L};KV{I|L}D{I|L}{I|L}[AG]H{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}QH{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}[AG]H{I|L};[{I|L}P]W{I|L}{I|L}{[VA]|[{I|L}G]}[PG]{I|L};KV{I|L}[{M(Oxidation (M))|F}V][MT]K{I|L};[Q{I|L}][{I|L}T]{I|L}{I|L}QH{I|L};{[QN]|[E{I|L}]|[KN]}VVK{I|L}QH{I|L};[{I|L}P]W{I|L}[NP]{I|L}{I|L}{I|L};[Q{I|L}][{I|L}T]{I|L}{I|L}[AG]H{I|L} 10.215;8.6829;6.1719;5.3174;4.8464;4.349;4.0983;3.7243;3.3335;3.2438 +;-;+;-;-;-;-;-;-;- + 496 + 1 1.225 52329.1 1.0 11958 4995 16949 HBL1_DMSO_200M_050219_2,16955 HBL1_DMSO_200M_050219_2,16955,KVLDILQHI True True KVLDILQHI 89.672847 539.8354 16639843.0 16949.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 7.402230580647786 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16956 89.681 452.0 1084900.0 25 0 486920.0 + 26564 NVLDEQKY 8 69 1008.5041615537256 1007.4968850871256 1 1008.506213366985 MULTI CID FTMS 0 0 0 16949 613155.5 1.0 0 0.0 7 Unmodified _NVLDEQKY_ REV__ENSG00000124151|ENST00000371998|NCOA3;REV__ENST00000497292.1_1_20:46255748-46257319:+|nuORF;REV__nc|ENSG00000124151|Q9Y6Q9-2|NCOA3;REV__nc|ENSG00000124151|Q9Y6Q9-3|NCOA3;REV__nc|ENSG00000124151|Q9Y6Q9-4|NCOA3;REV__nc|ENSG00000124151|Q9Y6Q9-5|NCOA3 18.1463463914782 0.6428359029697936 4 NE 2 -1 23.02 0.0 0.0 2.2849 0.0 0.0 0.0 761.3848360650999 761.3848360650999 9.832881222565252 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 NE 2.2849 - 179 + 1 1.225 315501.1 1.0 11959 4995 16949 HBL1_DMSO_200M_050219_2,16956 HBL1_DMSO_200M_050219_2,16956,NVLDEQKY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16957 89.684 152.0 352250.0 25 0 53660.0 + 22855 LSAEWIAL 8 78 451.75274496202985 901.4909369908596 2 451.7531310915947 MULTI CID FTMS 0 0 0 16949 361797.21875 0.0278575063544168 80 -8.167076110839844 8 Unmodified _LSAEWIAL_ REV__ENSG00000155906|ENST00000444024|RMND1;REV__nc|ENSG00000155906|Q9NWS8-2|RMND1 32.116972079565 0.368454113111938 4 [{I|L}A]SMPS{I|L}A{I|L} 9 -1 + 54.051 0.0 0.0 5.9958 5.9958 86.981 0.0 0.0 0.0 13.010299956639813 8.384767769392738 8.384767769392738 10.177287669604311 0 0.7742275032520141 2.0 0.4247425010840047 0.0 [{I|L}A]SMPS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[TV]|[{I|L}S]}AMPS{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[{I|L}A]S[WE]{I|L}A{I|L};{[HG]|PP}S{M(Oxidation (M))|F}AS{I|L}A{I|L};[{I|L}A][EC]{[VA]|[{I|L}G]}{I|L}A{I|L};{[TV]|[{I|L}S]}[RD]D{I|L}A{I|L};{[TV]|[{I|L}S]}A[WE]{I|L}A{I|L} 5.9958;4.8668;4.5526;4.3376;4.199;3.6443;3.5055;2.8944;2.7558 -;-;-;-;-;-;-;-;+ + 224 1 1.225 46539.9 1.0 11960 4995 16949 HBL1_DMSO_200M_050219_2,16957 HBL1_DMSO_200M_050219_2,16957,LSAEWIAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16958 89.69 309.0 386020.0 25 0 14173.0 -1 0 119 943.475313160726 1884.936073388252 2 943.9797241091728 MULTI CID FTMS 0 0 0 16949 257606.0625 0.9095505525616864 2 -0.2928924560546875 9 4 [NP]N{I|L}{I|L}G{M(Oxidation (M))|F} 7 -1 37.013 0.0 0.0 1.9636 0.0 0.0 0.0 1126.5472543787396 1126.5472543787396 -7.570816398925956 0.0 -7.570816398925956 0.0 0 0.0 0.0 0.0 1.329689690656103 [NP]N{I|L}{I|L}G{M(Oxidation (M))|F} 1.9636 - 5689 1 1.225 80455.9 1.0 11961 4995 16949 HBL1_DMSO_200M_050219_2,16958 HBL1_DMSO_200M_050219_2,16958, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16959 89.703 800.0 217460.0 25 0 49186.0 + 24918 MPPEPIII 8 157 455.25902358556806 908.503494237936 2 455.2604247927666 MULTI CID FTMS 0 0 0 16949 181112.4375 0.7979654599906361 4 -0.5617294311523438 10 Unmodified _MPPEPIII_ ENSG00000066117|ENST00000394963|SMARCD1;nc|ENSG00000066117|Q96GM5-2|SMARCD1 40.44857923139169 0.2267865117615937 4 [EP]PMP{I|L}{I|L}{I|L} 8 2 + 49.813 0.0 0.0 5.4829 5.4829 77.451 0.0 0.0 0.0 4.093414442931945 16.40978057358332 4.093414442931945 4.093414442931945 0 0.6861818737241735 0.4814860601221125 0.0 0.0 [EP]PMP{I|L}{I|L}{I|L};[DN][QP]P{I|L}{I|L}{I|L};[{I|L}P]PEPM{I|L}{I|L};[EP]P{I|L}PM{I|L}{I|L};{[HG]|PP}EMP{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[EP]P{I|L}{I|L}{I|L};[{I|L}P]PEP{I|L}M{I|L};[EP]P{I|L}P{I|L}M{I|L};{[HG]|PP}E{I|L}PM{I|L}{I|L};{[HG]|PP}{I|L}EPM{I|L}{I|L} 5.4829;5.0324;5.0101;5.0014;4.1294;4.0731;3.8799;3.8711;3.6478;2.5975 -;-;-;-;-;+;-;-;-;- + 409 1 1.225 137359.9 0.8399999737739563 11962 4995 16949 HBL1_DMSO_200M_050219_2,16959 HBL1_DMSO_200M_050219_2,16959,MPPEPIII False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16960 89.717 800.0 355140.0 25 0 37825.0 + 33185 SFFDATDRVSF 11 163 646.3021059451906 1290.5896589571812 2 646.3016845583916 MULTI CID FTMS 0 0 0 16949 177822.828125 0.6758725494807367 -1 0.0994338989257812 11 Unmodified _SFFDATDRVSF_ nc|ENSG00000005889|P17010-3|ZFX 70.49555756994154 0.0309684224005337 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[Q{I|L}]TADES{M(Oxidation (M))|F} 11 5 + 88.721 0.0 0.0 6.8744 6.8744 84.742 0.0 0.0 0.0 10.272464807506736 16.57577319177794 10.272464807506736 5.669015600442577 0 1.4802046884880935 2.0 1.2728787452803374 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[Q{I|L}]TADES{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[Q{I|L}]TADTD{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[WR]ADES{M(Oxidation (M))|F};[{I|L}T]HRDTADES{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[WR]ADTD{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HK]DTADES{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[Q{I|L}]TWES{M(Oxidation (M))|F};[{I|L}T]HRDTADTD{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]{I|L}ND{M(Oxidation (M))|F}{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 6.8744;6.4352;6.3649;6.0785;5.9257;5.8083;5.7838;5.6392;5.5819;5.5513 -;-;-;-;-;-;-;-;-;- 6209 1 1.225 206470.3 0.9800000190734864 11963 4995 16949 HBL1_DMSO_200M_050219_2,16960 HBL1_DMSO_200M_050219_2,16960,SFFDATDRVSF True True SFFDATDRVSF 89.717246 646.301684558392 2299729.75 16949.0 nc|ENSG00000005889|P17010-3|ZFX 6.129442850748698 2.0 True 11.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 16961 89.723 296.0 257790.0 25 0 55737.0 + 30646 RFPDFVRDF 9 82 400.2050806002729 1197.593412401019 3 400.2051879763603 MULTI CID FTMS 0 0 0 16949 188319.8125 0.3092022317520814 3 -0.3977737426757812 12 Unmodified _RFPDFVRDF_ ENSG00000213339|ENST00000250237|QTRT1;ENST00000587500.5_1_19:10823370-10823943:+|nuORF 17.44264345198275 0.3645313841742926 4 [R{M(Oxidation (M))|F}]PD{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[RD] 9 2 [R{M(Oxidation (M))|F}]P + + 21.431 5.4576 1.3636 1.7895 1.7895 44.451 0.0 0.0 0.0 0.0 10.322063437826756 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 [R{M(Oxidation (M))|F}]PD{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[RD] 1.7895 - 66 + 1 1.225 62286.4 1.0 11964 4995 16949 HBL1_DMSO_200M_050219_2,16961 HBL1_DMSO_200M_050219_2,16961,RFPDFVRDF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16962 89.737 800.0 323430.0 25 0 29920.0 -1 0 130 608.963511148881 1823.868704046843 3 608.9639160037041 MULTI CID FTMS 0 0 0 16949 172037.78125 0.5301528515651482 -1 0.0994338989257812 13 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 68.696 0.0 0.0 3.7665 0.0 0.0 0.0 882.3223252989304 882.3223252989304 48.14957542276183 0.0 0.0 0.0 0 1.5 1.5228787452803376 0.9361818737241736 0.0 [H{I|L}]VEA{I|L}Y{I|L} 3.7665 - 2120 1 1.225 194039.6 0.9700000286102296 11965 4995 16949 HBL1_DMSO_200M_050219_2,16962 HBL1_DMSO_200M_050219_2,16962, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16963 89.752 800.0 241440.0 25 0 57282.0 -1 0 136 923.4579376292384 1844.9013223252769 2 923.4516479372978 MULTI CID FTMS 0 0 0 16949 145080.0625 1.0 0 0.0 14 4 [{I|L}T][HS]{I|L}G{I|L}AM[YG]P{I|L} 13 -1 39.033 0.0 0.0 2.1157 0.0 0.0 0.0 488.23774775132046 488.23774775132046 9.752512112122355 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.2614393726401688 0.0 [{I|L}T][HS]{I|L}G{I|L}AM[YG]P{I|L} 2.1157 - 14396 1 1.225 125906.1 0.9300000071525574 11966 4995 16949 HBL1_DMSO_200M_050219_2,16963 HBL1_DMSO_200M_050219_2,16963, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16964 89.757 303.0 303010.0 25 0 47135.0 + 15460 IPQNDLLGL 9 112 491.7817814153457 0 491.7821533083916 PEAK CID FTMS 0 0 0 16949 112731.515625 0.7577054772940942 -1 0.0994338989257812 15 Unmodified _IPQNDLLGL_ ENSG00000135226|ENST00000335568|UGT2B28 26.88365393820708 0.1386685954232994 4 {I|L}ND{I|L} 4 5 19.029 0.0 0.0 1.9387 0.0 0.0 301.19855088033984 222.0887850397094 523.2873359200493 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}ND{I|L} 1.9387 - 293 + 1 1.225 73218.5 1.0 11967 4995 16949 HBL1_DMSO_200M_050219_2,16964 HBL1_DMSO_200M_050219_2,16964,IPQNDLLGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16965 89.771 800.0 62475.0 25 0 6164.8 -1 0 64 793.375710770636 2377.105302912108 3 793.7081786990166 MULTI CID FTMS 0 0 0 16949 53710.734375 0.6882215467114497 1 -0.1378707885742187 16 4 [QP]{I|L}DN{I|L} 6 -1 44.87 0.0 0.0 1.8876 0.0 0.0 0.0 1693.732414078377 1693.732414078377 17.914930551903225 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.6989700043360187 [QP]{I|L}DN{I|L} 1.8876 - 451 1 1.225 46657.2 0.7699999809265137 11968 4995 16949 HBL1_DMSO_200M_050219_2,16965 HBL1_DMSO_200M_050219_2,16965, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16966 89.786 800.0 203590.0 25 0 14030.0 + 3500 CLTMMIIIG 9 210 332.17705786434584 993.5093441932376 3 332.1770507693291 MULTI CID FTMS 0 0 0 16949 111997.25 0.5318632730562417 -1 0.0994338989257812 17 Unmodified _CLTMMIIIG_ REV__ENSG00000073849|ENST00000169298|ST6GAL1;REV__nc|ENSG00000073849|P15907-2|ST6GAL1 11.640296217721598 0.521594087909532 4 [DV][KT]N[{M(Oxidation (M))|F}T]VA 9 -1 + 14.63 0.0 0.0 1.4726 1.4726 68.892 0.0 0.0 0.0 0.0258380864395526 0.7893917754421338 0.0258380864395526 5.528419686577806 0 0.0 0.0 0.25 0.6989700043360187 [DV][KT]N[{M(Oxidation (M))|F}T]VA;[DV][KT]N[TA][{M(Oxidation (M))|F}V];[DV][KT]N{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}A;[DV][KT]N[{M(Oxidation (M))|F}V]TA;{[ES]|[DT]|[{I|L}C]}{I|L}NN{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}A;[DV]{I|L}{[ET]|[MV]}[{M(Oxidation (M))|F}T]VA;[KG][HN]NN{I|L}[TP];[DV][KT]N[Y{I|L}]AA;[DV]{I|L}{[ET]|[MV]}[TA][{M(Oxidation (M))|F}V];[DV][KT]N[{M(Oxidation (M))|F}T]{I|L}G 1.4726;0.9161;0.88246;0.78169;0.72972;0.70163;0.66769;0.18423;0.14518;0.14169 -;-;-;-;-;-;-;-;-;- 781 + 1 1.225 128159.6 0.6299999952316284 11969 4995 16949 HBL1_DMSO_200M_050219_2,16966 HBL1_DMSO_200M_050219_2,16966,CLTMMIIIG False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16967 89.8 800.0 174940.0 25 0 14527.0 -1 LPPPECEV 8 147 470.7255362520402 939.4365195708804 2 470.7250244021416 MULTI CID FTMS 0 0 0 16949 106196.6796875 1.0 0 0.0 18 Carbamidomethyl (C) _LPPPEC(Carbamidomethyl (C))EV_ ENST00000422020.5_1_22:32021999-32024880:-|nuORF 36.46614268402704 0.2934124525509074 4 [{I|L}P]PP{[C(Carbamidomethyl (C))E]|[WC]}D{I|L} 8 -1 + 38.594 0.0 0.0 4.1082 4.1082 81.452 0.0 0.0 0.0 3.5442563851659514 2.174617874626037 2.174617874626037 18.750612633917 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}P]PP{[C(Carbamidomethyl (C))E]|[WC]}D{I|L};{[HG]|PP}{I|L}P{[C(Carbamidomethyl (C))E]|[WC]}D{I|L};{[TV]|[{I|L}S]}[VP][C(Carbamidomethyl (C))H]D{I|L};[{I|L}P][VS][C(Carbamidomethyl (C))H]D{I|L};[{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))H][PA]P{I|L};{[HG]|PP}{I|L}{[QS]|[NT]}[NG]D{I|L} 4.1082;2.1122;1.965;1.6446;0.18504;0.16499 -;-;-;-;-;- 673 1 1.225 109975.1 0.7699999809265137 11970 4995 16949 HBL1_DMSO_200M_050219_2,16967 HBL1_DMSO_200M_050219_2,16967,LPPPECEV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16969 89.804 0.66 62530000.0 25 0 10297000.0 + 26528 NVIDNLIVA 9 64 485.7819795896355 969.549406246071 2 485.7827941775322 MULTI CID FTMS 0 0 0 16968 83435856.0 1.0 0 0.0 1 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 36.12702656103203 0.0967173616627612 4 {[NV]|[RG]}EVN{I|L} 6 5 29.13 0.0 0.0 3.0045 0.0 0.0 0.0 298.1756629201523 298.1756629201523 13.979400086720371 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 {[NV]|[RG]}EVN{I|L} 3.0045 - 186 1 1.219 36780.5 1.0 11971 4996 16968 HBL1_DMSO_200M_050219_2,16969 HBL1_DMSO_200M_050219_2,16969,NVIDNLIVA True True NVIDNLIVA 89.804256 485.782794177532 3087159808.0 16968.0 ENSG00000143621|ENST00000361891|ILF2 7.269963423411052 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16970 89.805 33.0 5065400.0 25 0 1315500.0 + 30211 QVVVDPKP 8 100 441.2578844981137 880.5012160630274 2 441.2583190798759 MULTI CID FTMS 0 0 0 16968 1833821.0 0.962649276220104 1 -0.1550216674804687 2 Unmodified _QVVVDPKP_ REV__ENSG00000067177|ENST00000373542|PHKA1;REV__nc|ENSG00000067177|P46020-2|PHKA1;REV__nc|ENSG00000067177|P46020-3|PHKA1 34.10243960390752 0.3329570729325616 4 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN 6 -1 53.139 0.0 0.0 6.035 0.0 0.0 0.0 209.12722912935672 209.12722912935672 25.56553388754701 0.0 0.0 0.0 0 0.6747425010840047 1.2218487496163564 0.6109243748081782 1.1688265215345564 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}VN 6.035 - 1524 1 1.219 132279.9 1.0 11972 4996 16968 HBL1_DMSO_200M_050219_2,16970 HBL1_DMSO_200M_050219_2,16970,QVVVDPKP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16971 89.807 18.0 2332800.0 25 0 202030.0 + 16875 KIFEDIPTL 9 63 538.3045034114629 1074.5944538897256 2 538.3056518435478 MULTI CID FTMS 0 0 0 16968 2703004.5 0.6407029896223118 -1 0.1378707885742187 3 Unmodified _KIFEDIPTL_ ENSG00000163565|ENST00000295809|IFI16;ENST00000493884.5_1_1:158984458-159022017:+|nuORF;nc|ENSG00000163565|Q16666-2|IFI16;nc|ENSG00000163565|Q16666-3|IFI16;nc|ENSG00000163565|Q16666-6|IFI16 37.97399986684836 0.0865783450051559 4 {I|L}R{M(Oxidation (M))|F}PT{I|L} 6 5 44.36 0.0 0.0 4.128 0.0 0.0 329.1928404403032 0.0 329.1928404403032 0.0 16.427900303521312 0.0 0.0 0 0.0 0.0 1.0994850021680094 0.0 {I|L}R{M(Oxidation (M))|F}PT{I|L} 4.128 - 106 + 1 1.219 40550.0 1.0 11973 4996 16968 HBL1_DMSO_200M_050219_2,16971 HBL1_DMSO_200M_050219_2,16971,KIFEDIPTL True True KIFEDIPTL 89.806613 538.305651843548 55426996.0 16968.0 ENST00000493884.5_1_1:158984458-159022017:+|nuORF;;nc|ENSG00000163565|Q16666-2|IFI16;;nc|ENSG00000163565|Q16666-6|IFI16;;nc|ENSG00000163565|Q16666-3|IFI16;;ENSG00000163565|ENST00000295809|IFI16 3.814771890640259 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16972 89.808 55.0 1680300.0 25 0 465580.0 -1 0 76 391.7314374240348 781.4483219148697 2 391.7320434451103 MULTI CID FTMS 0 0 0 16968 837575.75 0.8261337459847521 -1 0.1378707885742187 4 4 {I|L}{I|L}NY{I|L}{M(Oxidation (M))|F} 6 -1 + 41.82 0.0 0.0 5.3517 5.3517 83.912 0.0 0.0 0.0 24.997906580286795 10.41833743429045 10.41833743429045 9.420080530223132 0 0.9247425010840048 0.7958800173440752 0.0 0.0 {I|L}{I|L}NY{I|L}{M(Oxidation (M))|F};{I|L}{I|L}GGY{I|L}{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[Y{I|L}]{I|L}{M(Oxidation (M))|F} 5.3517;4.1462;2.5222 -;-;- 113 + 1 1.219 75306.5 1.0 11974 4996 16968 HBL1_DMSO_200M_050219_2,16972 HBL1_DMSO_200M_050219_2,16972, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16973 89.809 33.0 1249600.0 25 0 151860.0 + 18146 KTPDFILQV 9 73 530.8058157457439 1059.5970785582876 2 530.8053466677666 MULTI CID FTMS 0 0 0 16968 692347.375 1.0 0 0.0 5 Unmodified _KTPDFILQV_ ENSG00000186073|ENST00000566621|CDIN1;ENST00000566677.1_1_15:37001404-37100651:+|nuORF;ENST00000570265.5_1_15:36871929-37039277:+|nuORF;nc|ENSG00000186073|Q9Y2V0-2|CDIN1 24.020572477871973 0.2255576514309169 4 {NN|[MP]|[D{I|L}]|[EV]}M[KT]{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 9 5 + 27.425 0.0 0.0 2.5883 2.5883 69.736 0.0 0.0 0.0 3.3792310274444084 15.083559388717376 3.3792310274444084 5.440680443502757 0 0.0 0.0 0.7302046884880937 0.0 {NN|[MP]|[D{I|L}]|[EV]}M[KT]{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[DP]{M(Oxidation (M))|F}[KT]{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[KT]{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}S[SG]{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[NV]|[RG]}{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[NV]|[RG]}{I|L}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}M{I|L}{I|L}[KT]{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}S{I|L}[SG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 2.5883;2.0748;1.9718;1.4477;1.048;0.88067;0.59657;0.14326;0.12955;0.10007 -;-;-;-;-;-;-;-;-;- 203 1 1.219 40263.7 1.0 11975 4996 16968 HBL1_DMSO_200M_050219_2,16973 HBL1_DMSO_200M_050219_2,16973,KTPDFILQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16974 89.812 159.0 375060.0 25 0 35309.0 23981 LVTRYLRI 8 76 345.22204488660606 1032.6443052600182 3 345.2216674685478 MULTI CID FTMS 0 0 0 16968 518808.40625 1.0 0 0.0 6 Unmodified _LVTRYLRI_ ENST00000494087.5_1_13:45780977-45781184:+|nuORF 10.823927491677226 0.7510103885582552 4 [VP]SH{I|L}V{I|L}[R{I|L}] 9 5 [VP]S + + 32.101 5.6864 2.0082 3.1086 3.1086 46.175 0.0 0.0 0.0 0.0 25.110826842212703 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.2887254899964357 [VP]SH{I|L}V{I|L}[R{I|L}] 3.1086 - 92 + 1 1.219 54358.3 1.0 11976 4996 16968 HBL1_DMSO_200M_050219_2,16974 HBL1_DMSO_200M_050219_2,16974,LVTRYLRI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16975 89.814 93.0 658170.0 25 0 45294.0 + 33589 SIPDFPMHLA 10 92 564.2807342562144 1126.5469155792289 2 564.2813598513603 MULTI CID FTMS 0 0 0 16968 478884.59375 0.6333976307501362 -3 0.3135223388671875 7 Unmodified _SIPDFPMHLA_ ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1 34.10243960390752 0.2198439752719791 4 {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}PMHA{I|L} 10 2 + 55.297 0.0 0.0 4.9085 4.9085 84.037 0.0 0.0 0.0 10.142818292805728 8.370882904986274 8.370882904986274 15.740312677277188 0 0.3807196863200844 2.0 0.0 0.0 {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}PMHA{I|L};{[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}PA[HM]{I|L};{[TV]|[{I|L}S]}PD{[ES]|[DT]|[{I|L}C]}V[HM]{I|L};{[TV]|[{I|L}S]}[VS]D{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E]A{I|L};{[TV]|[{I|L}S]}PD{[ES]|[DT]|[{I|L}C]}V[NP]G{I|L} 4.9085;3.5113;2.1141;1.8469;1.709 -;-;-;-;- 380 + 1 1.219 53692.7 1.0 11977 4996 16968 HBL1_DMSO_200M_050219_2,16975 HBL1_DMSO_200M_050219_2,16975,SIPDFPMHLA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16976 89.825 622.0 233430.0 25 0 7151.2 -1 0 134 1193.549331174675 3577.6261641242254 3 1194.220141589642 MULTI CID FTMS 0 0 0 16968 397026.84375 1.0 0 0.0 8 4 D{I|L}VQY{M(Oxidation (M))|F}ANQQAED 13 -1 72.919 0.0 0.0 2.0382 0.0 0.0 1719.7651544580128 333.1322115533813 2052.8973660113943 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.5189301784845295 D{I|L}VQY{M(Oxidation (M))|F}ANQQAED 2.0382 - 24766 + 1 1.219 92775.6 1.0 11978 4996 16968 HBL1_DMSO_200M_050219_2,16976 HBL1_DMSO_200M_050219_2,16976, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16977 89.835 555.0 290870.0 25 0 15256.0 + 9366 FIPLPSAVVQA 11 163 571.3339714053425 1140.6533898774849 2 571.3342162966728 MULTI CID FTMS 0 0 0 16968 362332.53125 1.0 0 0.0 9 Unmodified _FIPLPSAVVQA_ ENSG00000100445|ENST00000399395|SDR39U1;nc|ENSG00000100445|Q9NRG7-3|SDR39U1 51.629811660486645 0.1086041609037681 4 [{I|L}P][PS]AVVQ 8 3 30.762 0.0 0.0 2.6969 0.0 0.0 0.0 346.17280047831497 346.17280047831497 9.540102967997974 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.2302046884880935 0.0 + [{I|L}P][PS]AVVQ 2.6969 + + 1901 1 1.219 126575.2 1.0 11979 4996 16968 HBL1_DMSO_200M_050219_2,16977 HBL1_DMSO_200M_050219_2,16977,FIPLPSAVVQA True True FIPLPSAVVQA 89.835031 571.334216296673 7533562.5 16968.0 nc|ENSG00000100445|Q9NRG7-3|SDR39U1;;ENSG00000100445|ENST00000399395|SDR39U1 4.380974451700847 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16978 89.847 686.0 266400.0 25 0 8497.8 + -1 YPTTFVMV 8 144 957.9595865903116 1913.904620247423 2 957.956103503704 MULTI CID FTMS 0 0 0 16968 260087.078125 0.6590689396826774 2 -0.2599029541015625 10 ENST00000470936.1_1_3:69134198-69151212:+|nuORF;ENSG00000144746|ENST00000273258|ARL6IP5 4 [MN]PN{I|L}NA{[DS]|[MA]|[CV]|TT}VWYAN{I|L}G 16 -1 60.279 0.0 0.0 3.1495 0.0 0.0 0.0 151.0510195367797 151.0510195367797 3.557200182760802 0.0 0.0 0.0 0 0.9124379954164592 1.5228787452803376 0.4247425010840047 0.0 [MN]PN{I|L}NA{[DS]|[MA]|[CV]|TT}VWYAN{I|L}G 3.1495 - 17284 + 1 1.219 121105.2 1.0 11980 4996 16968 HBL1_DMSO_200M_050219_2,16978 HBL1_DMSO_200M_050219_2,16978, False False YPTTFVMV 89.847002 957.956103503704 1312439.875 16968.0 ENST00000470936.1_1_3:69134198-69151212:+|nuORF;;ENSG00000144746|ENST00000273258|ARL6IP5 1.701451341311137 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16979 89.852 251.0 414620.0 25 0 45081.0 + 9195 FGGVLILIHR 10 108 375.5693297980315 1123.6861599942945 3 375.9040405154228 MULTI CID FTMS 0 0 0 16968 238777.4375 0.013224764676085 10 -1.0798416137695312 11 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 4 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 88.224 0.0 0.0 7.8513 7.8513 90.045 0.0 0.0 0.0 76.68501321413486 21.72044985140652 21.72044985140652 8.57840941039747 0 0.6861818737241735 2.0 0.0 0.6747425010840047 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}QV{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}H{I|L}R;[{I|L}V]{M(Oxidation (M))|F}[AG]V{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}QV{I|L}H{I|L}R;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}H{I|L}R;[{I|L}V]{M(Oxidation (M))|F}[AG]V{I|L}H{I|L}R;[{I|L}V]{M(Oxidation (M))|F}QH{I|L}V{I|L}R;[{I|L}V]{M(Oxidation (M))|F}[AG]H{I|L}V{I|L}R 7.8513;7.0878;7.0318;6.8767;6.2684;6.1133;6.0573;5.2939;4.7823;3.9629 -;-;-;-;-;-;-;-;-;- 238 + 1 1.219 89769.9 1.0 11981 4996 16968 HBL1_DMSO_200M_050219_2,16979 HBL1_DMSO_200M_050219_2,16979,FGGVLILIHR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 16980 89.858 331.0 467320.0 25 0 60516.0 + 25177 MSIMDFEKV 9 134 550.2621186767058 1098.5096844202114 2 550.2620117068291 MULTI CID FTMS 0 0 0 16968 185588.0625 1.0 0 0.0 12 Unmodified _MSIMDFEKV_ ENSG00000163214|ENST00000457308|DHX57 61.60191391372663 0.0251951588191061 4 MS{I|L}MD{M(Oxidation (M))|F}G{I|L}SV 10 3 + 78.303 0.0 0.0 7.1281 7.1281 86.699 0.0 0.0 0.0 42.35616446726716 13.52182518111364 13.52182518111364 6.586574573561549 0 0.7742275032520141 1.5228787452803376 1.1278623208748888 0.0 MS{I|L}MD{M(Oxidation (M))|F}G{I|L}SV;MS{I|L}MD{M(Oxidation (M))|F}EKV;MS{I|L}MD{M(Oxidation (M))|F}EVK;MS{I|L}MD{M(Oxidation (M))|F}G[VS]{I|L};MS{I|L}MD{M(Oxidation (M))|F}AAT{I|L};MS{I|L}MD[HV]APV;MS{I|L}MD[HV]V[PA];MS{I|L}MD[HV]GP{I|L};MS{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{[HG]|PP}AAPV;MS{I|L}DC[H{I|L}]{I|L}[PA] 7.1281;6.5286;5.6282;4.9231;4.3227;4.2917;3.9161;3.8608;3.0575;2.8721 -;+;-;-;-;-;-;-;-;- + 1520 + 1 1.219 123254.6 1.0 11982 4996 16968 HBL1_DMSO_200M_050219_2,16980 HBL1_DMSO_200M_050219_2,16980,MSIMDFEKV True True MSIMDFEKV 89.857668 550.262011706829 1755864.375 16968.0 ENSG00000163214|ENST00000457308|DHX57 5.33519450823466 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16981 89.863 295.0 253690.0 25 0 23617.0 + 22106 LPPPVFQM 8 108 464.75067886505946 927.4868047969188 2 464.7511474490166 MULTI CID FTMS 0 0 0 16968 150308.96875 0.5397728815773319 11 -1.178680419921875 13 Unmodified _LPPPVFQM_ ENSG00000173726|ENST00000366607|TOMM20;ENST00000534518.1_1_11:77024925-77025045:+|nuORF 56.04830969593885 0.114297258605095 4 [{I|L}P]PPVPG[HD] 9 4 + 37.641 0.0 0.0 4.0584 4.0584 70.443 0.0 0.0 0.0 8.300756084811816 8.951972631423295 8.300756084811816 3.2513497213259583 0 0.5 1.5228787452803376 0.0 0.0 [{I|L}P]PPVPG[HD];[{I|L}P]PPV{M(Oxidation (M))|F}QM;[VP]PP{I|L}PG[HD];[YN]{M(Oxidation (M))|F}{I|L}[K{I|L}]M;[{I|L}P]{[ET]|[MV]}P{I|L}QM;{[HG]|PP}VP{I|L}PG[HD];[VP]PP{I|L}{M(Oxidation (M))|F}QM;[YN]{M(Oxidation (M))|F}{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{I|L}P]P{[ET]|[MV]}{I|L}QM;{[HG]|PP}VP{I|L}{M(Oxidation (M))|F}QM 4.0584;3.7079;2.9726;2.8065;2.7321;2.7032;2.6221;2.6167;2.4075;2.3526 -;+;-;-;-;-;-;-;-;- + 374 1 1.219 62755.7 1.0 11983 4996 16968 HBL1_DMSO_200M_050219_2,16981 HBL1_DMSO_200M_050219_2,16981,LPPPVFQM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16982 89.878 800.0 219910.0 25 0 22872.0 + -1 SWPTYPQLY 9 95 1153.8239688030633 3458.45007700939 3 1154.492724597454 MULTI CID FTMS 0 0 0 16968 138045.296875 1.0 0 0.0 14 ENSG00000108010|ENST00000331244|GLRX3 4 {M(Oxidation (M))|F}P{[QV]|[N{I|L}]|[RA]|[KV]}G 5 -1 10.713 0.0 0.0 0.30977 0.0 0.0 1472.4970263275525 1454.7469931008145 2927.244019428367 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}P{[QV]|[N{I|L}]|[RA]|[KV]}G 0.30977 - 725 + 1 1.219 126697.1 0.8999999761581421 11984 4996 16968 HBL1_DMSO_200M_050219_2,16982 HBL1_DMSO_200M_050219_2,16982, False False SWPTYPQLY 89.8781 1154.49272459745 2194345.375 16968.0 ENSG00000108010|ENST00000331244|GLRX3 6.762619018554688 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16983 89.892 800.0 164140.0 25 0 13850.0 27978 PLWLTLLTL 9 155 535.336136412468 1068.657719891736 2 535.3340942263603 MULTI CID FTMS 0 0 0 16968 141764.359375 1.0 0 0.0 15 Unmodified _PLWLTLLTL_ nc|ENSG00000211663|P01714|IGLV3-19 13.50788311687929 0.4710407108020397 4 {I|L} 1 8 12.218 0.0 0.0 1.1433 0.0 0.0 937.5625946249376 0.0 937.5625946249376 0.0 1.249387366082999 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1433 + + 147 + 1 1.219 107335.8 0.9200000166893004 11985 4996 16968 HBL1_DMSO_200M_050219_2,16983 HBL1_DMSO_200M_050219_2,16983,PLWLTLLTL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 16984 89.906 800.0 180540.0 25 0 13976.0 + 10000 FPKLELSV 8 154 466.7742820992135 931.5340112652268 2 466.7762939333916 MULTI CID FTMS 0 0 0 16968 138454.359375 0.4888021128684269 -9 0.841766357421875 16 Unmodified _FPKLELSV_ ENSG00000144028|ENST00000323853|SNRNP200 45.69961567697781 0.159474709770503 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}E{I|L}SV 8 0 + 51.085 0.0 0.0 5.484 5.484 85.502 0.0 0.0 0.0 15.273109370204452 1.638568026386693 1.638568026386693 11.989700043360187 0 0.805462187404089 1.5228787452803376 0.0 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}E{I|L}SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}ES{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[{I|L}T]{I|L}SV;[KP]{M(Oxidation (M))|F}{I|L}E{I|L}SV;[KP]{I|L}{M(Oxidation (M))|F}E{I|L}SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}T{I|L}DV;[KP]{I|L}E{M(Oxidation (M))|F}{I|L}SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{I|L}TD{I|L}V;[VS]P[{I|L}A]{M(Oxidation (M))|F}{I|L}SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[PG]{I|L}{M(Oxidation (M))|F}V 5.484;4.1969;4.0683;3.8444;3.7103;3.6847;3.4722;3.4466;3.4417;3.2622 +;-;-;-;-;-;-;-;-;- + 1332 1 1.219 114256.2 0.8100000023841858 11986 4996 16968 HBL1_DMSO_200M_050219_2,16984 HBL1_DMSO_200M_050219_2,16984,FPKLELSV False True FPKLELSV 89.905749 466.7773 3660612.25 16968.0 ENSG00000144028|ENST00000323853|SNRNP200 3.634725252787272 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16985 89.912 287.0 109480.0 25 0 18768.0 -1 0 43 1057.4949234054725 0 1057.813159167767 PEAK CID FTMS 0 0 0 16968 41256.0859375 0.961763519389516 1 -0.1550216674804687 17 4 V{I|L}[KQ]{I|L} 5 -1 17.193 0.0 0.0 0.81367 0.0 0.0 1232.4729878248138 296.09101282291255 1528.5640006477263 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.25 V{I|L}[KQ]{I|L} 0.81367 - 41 + 1 1.219 30369.7 1.0 11987 4996 16968 HBL1_DMSO_200M_050219_2,16985 HBL1_DMSO_200M_050219_2,16985, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16986 89.926 800.0 182210.0 25 0 13144.0 + 45532 YTVEDLATQL 10 174 576.7920957725261 1151.569638611852 2 576.7936889529228 MULTI CID FTMS 0 0 0 16968 126053.2421875 0.0325507728479308 5 -0.5770950317382812 18 Unmodified _YTVEDLATQL_ ENSG00000124571|ENST00000265351|XPO5 25.399314129420983 0.3980215340001851 4 [YT][RV]G 5 7 14.81 0.0 0.0 1.2861 0.0 0.0 0.0 572.2540007546833 572.2540007546833 0.1715027310141899 0.0 0.0 0.0 0 0.2614393726401688 1.154901959985743 0.4436726795685343 0.2742275032520141 [YT][RV]G 1.2861 - 1642 1 1.219 111622.1 0.8700000047683716 11988 4996 16968 HBL1_DMSO_200M_050219_2,16986 HBL1_DMSO_200M_050219_2,16986,YTVEDLATQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16987 89.94 800.0 185910.0 25 0 43337.0 -1 0 156 319.6657905265695 0 319.6660034060478 PEAK CID FTMS 0 0 0 16968 115389.4296875 0.909879085242323 -1 0.1378707885742187 19 4 S 1 -1 6.9897 0.0 0.0 1.0967 0.0 0.0 130.12063027013272 417.1304110162719 547.2510412864046 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 S 1.0967 - 8 + 1 1.219 122681.1 0.6499999761581421 11989 4996 16968 HBL1_DMSO_200M_050219_2,16987 HBL1_DMSO_200M_050219_2,16987, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 16988 89.955 800.0 112050.0 25 0 8203.0 + 35838 SVIDIINGEATM 12 134 632.3186802558519 0 632.3168823122978 PEAK CID FTMS 0 0 0 16968 100270.8515625 1.0 0 0.0 20 Unmodified _SVLDITLWGME_ ENSG00000168090|ENST00000303904|COPS6 17.11289562659939 0.3845757490720307 4 DVK{I|L} 4 9 14.949 0.0 0.0 1.1839 0.0 0.0 416.1956358029161 388.1159456842407 804.3115814871568 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DVK{I|L} 1.1839 - 101 + 1 1.219 73842.7 0.8299999833106995 11990 4996 16968 HBL1_DMSO_200M_050219_2,16988 HBL1_DMSO_200M_050219_2,16988,SVLDITLWGME False False SVIDIINGEATM 89.954893 632.316882312298 190632.328125 16968.0 ENSG00000168090|ENST00000303904|COPS6 4.005826711654663 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16990 89.959 2.4 15501000.0 25 0 1164400.0 + 35440 STLHLVLRL 9 61 351.2257507279637 1050.6554227840911 3 351.2257873415947 MULTI CID FTMS 0 0 0 16989 17237394.0 0.850799354044973 1 -0.1048812866210937 1 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 20.453626601364224 0.2830276176381075 4 H{I|L}V{I|L}[R{I|L}] 6 3 29.213 0.0 0.0 2.7805 0.0 0.0 301.163562406445 0.0 301.163562406445 0.0 1.7659970366415934 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 + H{I|L}V{I|L}[R{I|L}] 2.7805 + + 48 + 1 1.218 36702.0 1.0 11991 4997 16989 HBL1_DMSO_200M_050219_2,16990 HBL1_DMSO_200M_050219_2,16990,STLHLVLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16991 89.96 3.2 18735000.0 25 0 1431200.0 + 35447 STLHLVLRL 9 67 526.3345197990178 1050.6544866648355 2 526.3350707888603 MULTI CID FTMS 0 0 0 16989 13701997.0 0.7648878229407671 1 -0.1048812866210937 2 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 49.93300154707207 0.0405168250806675 4 {[MG]|[TS]}{I|L}H{I|L}V{I|L}{I|L}R 9 2 + 50.025 0.0 0.0 4.7613 4.7613 70.961 0.0 0.0 0.0 24.082948350588268 8.197859905088634 8.197859905088634 2.218487496163561 0 1.424742501084005 0.0 0.0 0.0 {[MG]|[TS]}{I|L}H{I|L}V{I|L}{I|L}R;{[MG]|[TS]}{I|L}H{I|L}{I|L}V{I|L}R;{I|L}{[MG]|[TS]}H{I|L}V{I|L}{I|L}R;{I|L}{[MG]|[TS]}H{I|L}{I|L}V{I|L}R;{[MG]|[TS]}{I|L}{I|L}HV{I|L}{I|L}R;{[MG]|[TS]}{I|L}{I|L}H{I|L}V{I|L}R;{I|L}{[MG]|[TS]}{I|L}HV{I|L}{I|L}R;{I|L}{[MG]|[TS]}{I|L}H{I|L}V{I|L}R 4.7613;4.5502;4.3571;4.1459;3.9989;3.7878;3.5946;3.3835 -;-;-;-;-;-;-;- 115 + 1 1.218 49833.8 1.0 11992 4997 16989 HBL1_DMSO_200M_050219_2,16991 HBL1_DMSO_200M_050219_2,16991,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16992 89.962 5.2 11287000.0 25 0 919230.0 + 29727 QPLPVILHV 9 74 508.31861358773176 1014.6226742422637 2 508.3188964724541 MULTI CID FTMS 0 0 0 16989 9720100.0 1.0 0 0.0 3 Unmodified _QPLPVILHV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 32.116972079565 0.1225432171549407 4 [QP]{I|L}PV{I|L}{I|L}VH 9 2 + 46.406 0.0 0.0 4.5737 4.5737 84.828 0.0 0.0 0.0 14.187069798145444 12.252684618815088 12.252684618815088 46.405557294309006 0 0.3252574989159953 0.0 0.0 0.0 [QP]{I|L}PV{I|L}{I|L}VH 4.5737 - 116 + 1 1.218 48725.5 1.0 11993 4997 16989 HBL1_DMSO_200M_050219_2,16992 HBL1_DMSO_200M_050219_2,16992,QPLPVILHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16993 89.963 26.0 2219200.0 25 0 404500.0 + 36346 SYPDNFLHI 9 72 553.26928076382 1104.52400859444 2 553.2695800662041 MULTI CID FTMS 0 0 0 16989 1786663.25 0.6733292154650701 1 -0.1048812866210937 4 Unmodified _SYPDNFLHI_ ENSG00000057663|ENST00000369076|ATG5;nc|ENSG00000057663|Q9H1Y0-2|ATG5 19.256988751693697 0.3154191944385105 4 [DP]N{M(Oxidation (M))|F}{I|L}H 6 3 37.14 0.0 0.0 3.3625 0.0 0.0 0.0 378.16670125094737 378.16670125094737 16.020599913279625 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.3494850021680094 + [DP]N{M(Oxidation (M))|F}{I|L}H 3.3625 + + 171 1 1.218 49568.4 1.0 11994 4997 16989 HBL1_DMSO_200M_050219_2,16993 HBL1_DMSO_200M_050219_2,16993,SYPDNFLHI False True SYPDNFLHI 89.96282 553.269580066204 41358224.0 16989.0 nc|ENSG00000057663|Q9H1Y0-2|ATG5;;ENSG00000057663|ENST00000369076|ATG5 7.80189323425293 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16994 89.964 38.0 1783200.0 25 0 357430.0 + 4948 DGLVVLKI 8 75 428.77872575526897 855.542898577338 2 428.7787963747978 MULTI CID FTMS 0 0 0 16989 1688782.375 0.5373767179616256 -2 0.2928924560546875 5 Unmodified _DGLVVLKI_ ENSG00000147677|ENST00000521861|EIF3H;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 34.10243960390752 0.3329570729325616 4 [DG]{I|L}VV{I|L}K{I|L} 8 0 [DG]{I|L} + + 40.628 14.225 4.989 4.7488 4.7488 51.47 0.0 0.0 0.0 0.0 25.56675915538101 0.0 0.0 0 0.805462187404089 0.0 0.0 0.2396518287104437 + + [DG]{I|L}VV{I|L}K{I|L} 4.7488 + + 77 + 1 1.218 57917.4 1.0 11995 4997 16989 HBL1_DMSO_200M_050219_2,16994 HBL1_DMSO_200M_050219_2,16994,DGLVVLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16995 89.965 36.0 1884400.0 25 0 170210.0 + 12758 GVPELLQKI 9 96 498.808343739672 995.602134546144 2 498.8081542849541 MULTI CID FTMS 0 0 0 16989 953748.125 0.9727909331116946 -1 0.1550216674804687 6 Unmodified _GVPELLQKI_ ENSG00000076513|ENST00000261739|ANKRD13A 36.12702656103203 0.0967173616627612 4 [VG]PE{I|L}{I|L}QK{I|L} 9 0 + 61.693 0.0 0.0 6.1965 6.1965 86.401 0.0 0.0 0.0 11.84955642535897 12.98332479720628 11.84955642535897 9.208187539523747 0 0.3054621874040891 2.0 0.3054621874040891 0.0 + + [VG]PE{I|L}{I|L}QK{I|L};[VG]PE{I|L}{I|L}[AG]K{I|L};[VG]{I|L}[EP]{I|L}QK{I|L};[VG]{I|L}[EP]{I|L}[AG]K{I|L};R{I|L}[{M(Oxidation (M))|F}V]{I|L}{I|L}[HV] 6.1965;5.2716;4.2914;3.3665;0.25196 +;-;-;-;- + 162 + 1 1.218 55719.0 1.0 11996 4997 16989 HBL1_DMSO_200M_050219_2,16995 HBL1_DMSO_200M_050219_2,16995,GVPELLQKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16996 89.967 52.0 1264900.0 25 0 112440.0 + 93 AAHMRYFI 8 74 504.7561861445312 1007.4978193558624 2 504.7563659548759 MULTI CID FTMS 0 0 0 16989 761481.375 0.1639785319610912 2 -0.2688369750976562 7 Unmodified _AAHMRYFI_ REV__ENSG00000163982|ENST00000296358|OTOP1 14.581692164780916 0.6954967302934248 4 AAA{I|L}D{[WN]|[YH]}{M(Oxidation (M))|F} 8 -1 32.357 0.0 0.0 3.2116 0.0 0.0 0.0 116.05111108951404 116.05111108951404 7.944087325889981 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.7614393726401688 AAA{I|L}D{[WN]|[YH]}{M(Oxidation (M))|F} 3.2116 - 74 + 1 1.218 60144.0 1.0 11997 4997 16989 HBL1_DMSO_200M_050219_2,16996 HBL1_DMSO_200M_050219_2,16996,AAHMRYFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16997 89.968 81.0 921170.0 25 0 133390.0 + 27799 PLPQGPRRL 9 82 517.3181254860068 1032.6216980388135 2 518.3218871951103 MULTI CID FTMS 0 0 0 16989 686173.125 0.478751850901541 2 -0.2688369750976562 8 Unmodified _PLPQGPRRL_ REV__ENST00000270502.6_1_19:11039810-11040236:+|nuORF 9.347437153973935 0.588369872918737 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P 3 -1 30.19 0.0 0.0 2.9236 0.0 0.0 0.0 688.425017701176 688.425017701176 4.783474859079387 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P 2.9236 - 76 1 1.218 68563.7 1.0 11998 4997 16989 HBL1_DMSO_200M_050219_2,16997 HBL1_DMSO_200M_050219_2,16997,PLPQGPRRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 16998 89.971 103.0 778790.0 25 0 128230.0 + + 30395 RIINGIIISV 10 73 549.8475211842875 1097.680489435375 2 549.8479492068291 MULTI CID FTMS 0 0 0 16989 592647.5 1.0 0 0.0 9 Unmodified _RARQRLLSV_ nc|ENSG00000122986|Q96D96-4|HVCN1;ENSG00000122986|ENST00000242607|HVCN1;HVCN1|p.R208Q|1|0.41|ENSG00000122986|chr12:110651237-110651237|C/T|missense_variant;nc|ENSG00000122986|Q96D96-3|HVCN1;nc|ENSG00000122986|Q96D96-2|HVCN1;chr12:110661448-110688625|40|10.35|0.61|4.09|-|ENST00000439744|HVCN1,HVCN1 24.99096001346401 0.2132109383330889 4 DG{I|L}{I|L}{I|L}W 6 -1 50.394 0.0 0.0 4.5909 0.0 0.0 382.26939589668126 0.0 382.26939589668126 0.0 28.332275199626547 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 DG{I|L}{I|L}{I|L}W 4.5909 - 267 1 1.218 65936.6 1.0 11999 4997 16989 HBL1_DMSO_200M_050219_2,16998 HBL1_DMSO_200M_050219_2,16998,RARQRLLSV False False RIINGIIISV 89.970584 549.8492 0.0 16989.0 nc|ENSG00000122986|Q96D96-4|HVCN1;;ENSG00000122986|ENST00000242607|HVCN1;;HVCN1|p.R208Q|1|0.41|ENSG00000122986|chr12:110651237-110651237|C/T|missense_variant;;nc|ENSG00000122986|Q96D96-3|HVCN1;;nc|ENSG00000122986|Q96D96-2|HVCN1;;chr12:110661448-110688625|40|10.35|0.61|4.09|-|ENST00000439744|HVCN1,HVCN1 5.892775058746338 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 16999 89.973 102.0 669430.0 25 0 54707.0 + 4187 DAPIVAHLW 9 90 511.2767915749069 1020.5390302166136 2 511.2770263552666 MULTI CID FTMS 0 0 0 16989 377304.90625 0.0715910280038146 -3 0.3923263549804687 10 Unmodified _DAPIVAHLW_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 59.79521254764295 0.0261954583213598 4 {[DA]|[EG]}P{I|L}VAH{I|L}W 9 0 + 58.828 0.0 0.0 5.7644 5.7644 88.559 0.0 0.0 0.0 28.47295930833134 5.430599746173215 5.430599746173215 21.9825221775622 0 0.5796896906561032 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}P{I|L}VAH{I|L}W;[{I|L}P]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AV{I|L}[HQ];[{I|L}P][WE]V{I|L}[HQ];[{I|L}P]V[WE]{I|L}[HQ];WP{I|L}[R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}] 5.7644;3.6103;3.2705;3.1756;3.1143 +;-;-;-;- + 268 + 1 1.218 59155.4 1.0 12000 4997 16989 HBL1_DMSO_200M_050219_2,16999 HBL1_DMSO_200M_050219_2,16999,DAPIVAHLW True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17000 89.985 690.0 254540.0 25 0 18148.0 + 15664 IQLTQMSLQL 10 194 587.8266660483907 1173.6387791635814 2 587.8270141482353 MULTI CID FTMS 0 0 0 16989 295642.6875 1.0 0 0.0 11 Unmodified _IQLTQMSLQL_ ENSG00000188352|ENST00000338382|FOCAD 114.20165948288296 0.0011420412450596 4 [Q{I|L}]{I|L}T[WC(Carbamidomethyl (C))]{I|L}Q{I|L} 9 3 + 70.652 0.0 0.0 6.0199 6.0199 75.704 0.0 0.0 0.0 1.972254735255774 32.97908091776253 1.972254735255774 1.9188552623891293 0 1.274227503252014 2.0 1.200061205686631 1.301203852579394 [Q{I|L}]{I|L}T[WC(Carbamidomethyl (C))]{I|L}Q{I|L};[Q{I|L}]{I|L}T{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}Q{I|L};Q{I|L}{I|L}E{I|L}[C(Carbamidomethyl (C))S]AK{I|L};[Q{I|L}]{I|L}T[MT]N{I|L}Q{I|L};Q{I|L}{I|L}[MT][KC]PQ{I|L};[Q{I|L}]T{I|L}[WC(Carbamidomethyl (C))]{I|L}Q{I|L};Q{I|L}{I|L}[MT]AAWQ{I|L};[Q{I|L}]T{I|L}{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}Q{I|L};[Q{I|L}]T{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}{I|L}Q{I|L};[Q{I|L}]{I|L}T[Q{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L} 6.0199;5.8564;5.7641;5.7244;5.6359;5.4634;5.4365;5.2999;5.2733;5.2636 -;-;-;-;-;-;-;-;-;- 4806 1 1.218 132101.6 1.0 12001 4997 16989 HBL1_DMSO_200M_050219_2,17000 HBL1_DMSO_200M_050219_2,17000,IQLTQMSLQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17001 89.989 221.0 298480.0 25 0 34068.0 11547 GIRCHLFY 8 84 336.8396439143945 1007.4971023433836 3 336.8393737673759 MULTI CID FTMS 0 0 0 16989 281736.15625 0.1631411476233567 2 -0.2688369750976562 12 Unmodified _GIRCHLFY_ ENSG00000172530|ENST00000682872|BANP;ENST00000604430.1_1_16:29323693-29367128:+|nuORF;nc|ENSG00000172530|Q8N9N5-2|BANP;nc|ENSG00000172530|Q8N9N5-3|BANP;nc|ENSG00000172530|Q8N9N5-4|BANP;nc|ENSG00000172530|Q8N9N5-5|BANP;nc|ENSG00000172530|Q8N9N5-6|BANP;nc|ENSG00000172530|Q8N9N5-7|BANP;nc|ENSG00000172530|Q8N9N5|BANP 5.760428011301431 0.7893668129297577 4 {[NV]|[RG]}{I|L}D 4 5 20.005 0.0 0.0 1.9856 0.0 0.0 0.0 563.2517526122074 563.2517526122074 9.431890546242345 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {[NV]|[RG]}{I|L}D 1.9856 - 85 + 1 1.218 60624.8 1.0 12002 4997 16989 HBL1_DMSO_200M_050219_2,17001 HBL1_DMSO_200M_050219_2,17001,GIRCHLFY False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17002 89.996 393.0 312790.0 25 0 54876.0 -1 ALMAAPLSL 9 127 451.75274496202985 901.4909369908596 2 451.7527038455009 MULTI CID FTMS 0 0 0 16989 259210.203125 0.0199585555290683 82 -8.000144958496094 13 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 49.66892048692302 0.0410958345688192 4 [{I|L}A]{M(Oxidation (M))|F}PASA{I|L}{I|L} 9 -1 + 58.45 0.0 0.0 6.4837 6.4837 75.033 0.0 0.0 0.0 5.708253071758875 0.6356056965476213 0.6356056965476213 0.6356056965476213 0 1.013879331962458 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PASA{I|L}{I|L};[{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APSA{I|L}{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPASA{I|L}{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPSA{I|L}{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A]N[NS]SA{I|L}{I|L};[{I|L}A]N[NS]S{I|L}A{I|L} 6.4837;6.4132;6.0422;5.9717;5.8505;5.78;5.431;5.3605;5.2058;5.1353 -;-;-;-;-;-;-;-;-;- 607 1 1.218 98908.1 1.0 12003 4997 16989 HBL1_DMSO_200M_050219_2,17002 HBL1_DMSO_200M_050219_2,17002,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17003 90.0 205.0 457160.0 25 0 50094.0 + 40866 RVIGPFYEI 9 91 547.3052269867366 1092.595901040273 2 547.3047973513603 MULTI CID FTMS 0 0 0 16989 259727.4375 0.3785672426532581 -4 0.4685440063476562 14 Unmodified _VLPWSIHEL_ nc|ENSG00000107897|Q5T8D3-4|ACBD5;nc|ENSG00000107897|Q5T8D3-2|ACBD5;nc|ENSG00000107897|Q5T8D3|ACBD5;ENSG00000107897|ENST00000396271|ACBD5;ENST00000476758.1_1_10:27509331-27520733:-|nuORF 23.1484247019978 0.2366544122328345 4 [{I|L}V]RG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YE{I|L} 9 4 + 49.913 0.0 0.0 4.5683 4.5683 70.043 0.0 0.0 0.0 2.108533653148932 16.478174818886373 2.108533653148932 2.108533653148932 0 0.7059771852360797 1.0969100130080565 0.0 0.0 [{I|L}V]RG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YE{I|L};[RV]{I|L}G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YE{I|L};{[QN]|[E{I|L}]|[KN]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{I|L}V]P[KT] 4.5683;4.3753;0.55739 -;-;- 163 1 1.218 75038.5 1.0 12004 4997 16989 HBL1_DMSO_200M_050219_2,17003 HBL1_DMSO_200M_050219_2,17003,VLPWSIHEL False False RVIGPFYEI 89.999913 547.30479735136 30748128.0 16989.0 nc|ENSG00000107897|Q5T8D3-4|ACBD5;;nc|ENSG00000107897|Q5T8D3-2|ACBD5;;nc|ENSG00000107897|Q5T8D3|ACBD5;;ENSG00000107897|ENST00000396271|ACBD5;;ENST00000476758.1_1_10:27509331-27520733:-|nuORF 6.204469362894694 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17004 90.006 317.0 288550.0 25 0 40657.0 + -1 TPFTFFCLE 9 102 581.269431659322 1160.524310385444 2 581.2698242068291 MULTI CID FTMS 0 0 0 16989 244823.03125 1.0 0 0.0 15 Carbamidomethyl (C) _TPFTFFC(Carbamidomethyl (C))LE_ REV__ENST00000509394.6_1_4:20544172-20554168:+|nuORF 12.531546534597751 0.4974689918368763 4 [TP]{M(Oxidation (M))|F}{I|L} 4 -1 32.58 0.0 0.0 2.8073 0.0 0.0 0.0 699.2480351462269 699.2480351462269 2.187200862615697 0.0 0.0 0.0 0 0.0 1.154901959985743 1.110924374808178 0.0 [TP]{M(Oxidation (M))|F}{I|L} 2.8073 - 324 1 1.218 71165.5 1.0 12005 4997 16989 HBL1_DMSO_200M_050219_2,17004 HBL1_DMSO_200M_050219_2,17004,TPFTFFCLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17005 90.019 771.0 273510.0 25 0 14083.0 + -1 PELCTWDMYQ 10 156 671.7750160124011 1341.5354790916022 2 672.2772704958916 MULTI CID FTMS 0 0 0 16989 236273.59375 0.6373239484109122 -3 0.3923263549804687 16 Carbamidomethyl (C) _PELC(Carbamidomethyl (C))TWDMYQ_ REV__ENST00000506271.1_1_17:46993425-46993515:+|nuORF 6.723162845929126 0.6955379296933136 4 [EP]GDWSETV 9 -1 51.995 0.0 0.0 3.8758 0.0 0.0 0.0 338.0809200357024 338.0809200357024 30.199018381151305 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.236346736360778 0.0 [EP]GDWSETV 3.8758 - 2122 1 1.218 152370.2 1.0 12006 4997 16989 HBL1_DMSO_200M_050219_2,17005 HBL1_DMSO_200M_050219_2,17005,PELCTWDMYQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17006 90.027 375.0 314290.0 25 0 25008.0 + 34017 SLITPLQAV 9 119 471.2866826389215 940.558812344643 2 471.2868530154228 MULTI CID FTMS 0 0 0 16989 222712.0 0.9057191729225604 -1 0.1550216674804687 17 Unmodified _SLITPLQAV_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 88.90359156742426 0.0153595091083554 4 {[TV]|[{I|L}S]}{I|L}TP{I|L} 6 3 58.848 0.0 0.0 6.2567 0.0 0.0 0.0 313.1485089601305 313.1485089601305 32.36055687450411 0.0 0.0 0.0 0 1.25 2.0 0.872363747448347 0.0 + {[TV]|[{I|L}S]}{I|L}TP{I|L} 6.2567 + + 720 1 1.218 93271.4 1.0 12007 4997 16989 HBL1_DMSO_200M_050219_2,17006 HBL1_DMSO_200M_050219_2,17006,SLITPLQAV True True SLITPLQAV 90.026951 471.286853015423 4756925.0 16989.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 6.191571394602458 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17007 90.032 258.0 299980.0 25 0 31502.0 + -1 LPSKFFLPCSM 11 83 448.2209854409624 1341.641126923087 3 448.2212402224541 MULTI CID FTMS 0 0 0 16989 195060.328125 1.0 0 0.0 18 Carbamidomethyl (C),Oxidation (M) _LPSKFFLPC(Carbamidomethyl (C))SM(Oxidation (M))_ REV__ENST00000444717.1_1_20:33867537-33867791:-|nuORF 5.523293073838413 0.8490886788190691 4 {I|L}{M(Oxidation (M))|F}S 3 -1 18.605 0.0 0.0 1.3868 0.0 0.0 509.1613408200744 482.2733553522094 991.4346961722838 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 {I|L}{M(Oxidation (M))|F}S 1.3868 - 50 + 1 1.218 69428.2 1.0 12008 4997 16989 HBL1_DMSO_200M_050219_2,17007 HBL1_DMSO_200M_050219_2,17007,LPSKFFLPCSM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17008 90.046 800.0 258460.0 25 0 62801.0 -1 0 144 964.9682458371808 1927.9219387411613 2 965.4711181521416 MULTI CID FTMS 0 0 0 16989 161296.6875 1.0 0 0.0 19 4 [MN]PN{I|L}NEAQVE[WR]Q{[TV]|[{I|L}S]} 16 -1 + 52.486 0.0 0.0 2.7224 2.7224 60.757 0.0 0.0 0.0 -4.3226084794848845 0.2665122095427392 -4.3226084794848845 0.0737394057364042 0 1.341129063296272 1.5228787452803376 0.6747425010840047 0.9119543704721594 [MN]PN{I|L}NEAQVE[WR]Q{[TV]|[{I|L}S]};[MN]PN{I|L}NEAQVEA[RD]Q{[TV]|[{I|L}S]};[MN]PN{I|L}NEAQVEAS[PS]Q{[TV]|[{I|L}S]};[MN]PN{I|L}NEAQVE[WR]K{[CP]|[EA]};[MN]PN{I|L}NEAQVEA[RD]K{[CP]|[EA]};[MN]P[YK]E{I|L}A[YN]{I|L}H{I|L}P[EP];[MN]PN{I|L}NEAQVPC[RD]Q{[TV]|[{I|L}S]};[NP]{I|L}N[H{I|L}]EVQAEN{I|L}DP[EP];[MN]PN{I|L}NEAQVWM[PG]Q{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NEAQVE[WR]Q{[TV]|[{I|L}S]} 2.7224;2.7186;2.5733;2.3843;2.3805;2.3614;2.356;2.3124;2.3051;2.2921 -;-;-;-;-;-;-;-;-;- 43377 + 1 1.218 134281.0 0.6700000166893005 12009 4997 16989 HBL1_DMSO_200M_050219_2,17008 HBL1_DMSO_200M_050219_2,17008, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17009 90.059 800.0 177690.0 25 0 11681.0 + 36234 SWPTYPQLY 9 169 577.7785220939638 1153.5424912547276 2 577.7770263552666 MULTI CID FTMS 0 0 0 16989 162832.25 1.0 0 0.0 20 Unmodified _SWPTYPQLY_ ENSG00000108010|ENST00000331244|GLRX3 39.957323273325 0.0756908302845263 4 {[WS]|[C(Carbamidomethyl (C)){I|L}]}[TP]Y[QP]{I|L}Y 9 0 + 37.214 0.0 0.0 3.2261 3.2261 76.7 0.0 0.0 0.0 13.081597033474424 10.000000000000004 10.000000000000004 10.000000000000004 0 0.7614393726401688 1.6989700043360187 0.0 0.4247425010840047 + + {[WS]|[C(Carbamidomethyl (C)){I|L}]}[TP]Y[QP]{I|L}Y;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[TP]Y[QP]Y{I|L};[QP]Y[TP]{I|L}[HV]{[CP]|[EA]};[TP]Y[QP]{I|L}[HV]{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}[HV]{I|L}[YE]{I|L}Y;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[TP]Y[TP]{M(Oxidation (M))|F}GV;[QP]Y{NN|[MP]|[D{I|L}]|[EV]}PV[WH];[{M(Oxidation (M))|F}V]D[QP]{I|L}[HV]{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}[RP]Y[QP]{I|L}Y;[QP]{I|L}[YG]{I|L}[YT]{[CP]|[EA]} 3.2261;2.3592;2.092;1.9025;1.6792;1.6033;1.5788;1.5178;1.4232;1.3949 +;-;-;-;-;-;-;-;-;- + 1987 + 1 1.218 112502.0 0.800000011920929 12010 4997 16989 HBL1_DMSO_200M_050219_2,17009 HBL1_DMSO_200M_050219_2,17009,SWPTYPQLY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17011 90.076 800.0 159230.0 25 0 13600.0 -1 0 107 608.963511148881 1823.868704046843 3 608.9640380740166 MULTI CID FTMS 0 0 0 17010 97499.71875 0.3004558274731438 2 -0.2168960571289062 1 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 58.699 0.0 0.0 3.2184 0.0 0.0 0.0 882.3234759644375 882.3234759644375 38.72638030421327 0.0 0.0 0.0 0 1.5 1.5228787452803376 0.2887254899964357 0.0 [H{I|L}]VEA{I|L}Y{I|L} 3.2184 - 940 1 1.218 101365.3 0.8999999761581421 12011 4998 17010 HBL1_DMSO_200M_050219_2,17011 HBL1_DMSO_200M_050219_2,17011, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17012 90.077 34.0 1563000.0 25 0 438070.0 + 4041 DALSKMVII 9 72 495.2901401460561 988.565727358912 2 495.2889587283134 MULTI CID FTMS 0 0 0 17010 1173804.5 1.0 0 0.0 2 Unmodified _DALSKMVII_ ENSG00000100104|ENST00000215917|SRRD 57.72198328787511 0.0273433238377839 4 {[DA]|[EG]}{I|L}SKMV{I|L}{I|L} 9 0 + 85.06 0.0 0.0 8.6043 8.6043 96.399 0.0 0.0 0.0 19.89909385331508 16.478174818886373 16.478174818886373 19.89909385331508 0 1.3494850021680094 1.6989700043360187 0.7742275032520141 0.0 + + {[DA]|[EG]}{I|L}SKMV{I|L}{I|L};{[SA]|[TG]}{I|L}DKMV{I|L}{I|L};[KS]MV{I|L}W{I|L}{I|L};[KS]MV{[CP]|[EA]}V{I|L}{I|L};[KS]M{I|L}WV{I|L}{I|L};[KS]QKSW{I|L}{I|L};[KS]MV{I|L}{[DA]|[EG]}{I|L}{I|L};[KS]M{I|L}VW{I|L}{I|L};{[SA]|[TG]}[KG]KSW{I|L}{I|L};[KS]MV{I|L}{I|L}W{I|L} 8.6043;6.5914;5.8265;5.3192;5.2201;5.0666;4.8896;4.7904;4.5723;4.3582 +;-;-;-;-;-;-;-;-;- + 366 1 1.218 46959.0 1.0 12012 4998 17010 HBL1_DMSO_200M_050219_2,17012 HBL1_DMSO_200M_050219_2,17012,DALSKMVII True True DALSKMVII 90.076934 495.288958728313 11707046.0 17010.0 ENSG00000100104|ENST00000215917|SRRD 2.723515490690867 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17013 90.082 280.0 369490.0 25 0 13809.0 -1 0 116 976.1130387959032 2925.317286987909 3 976.4484741091728 MULTI CID FTMS 0 0 0 17010 337467.0625 1.0 0 0.0 3 4 {[TV]|[{I|L}S]}E{I|L}R{I|L}E 7 -1 28.069 0.0 0.0 0.95953 0.0 0.0 0.0 2081.8057262791776 2081.8057262791776 12.92821403239822 0.0 0.0 0.0 0 0.0 0.0 1.4916440611282626 0.0 {[TV]|[{I|L}S]}E{I|L}R{I|L}E 0.95953 - 2670 1 1.218 75889.1 1.0 12013 4998 17010 HBL1_DMSO_200M_050219_2,17013 HBL1_DMSO_200M_050219_2,17013, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17014 90.089 408.0 404440.0 25 0 54839.0 + + 25791 RIVSQLLTL 9 153 521.8344877647514 1041.6544225963028 2 521.8351318240166 MULTI CID FTMS 0 0 0 17010 216500.828125 0.9813999358721056 -1 0.1048812866210937 4 Unmodified _NKINVKLTL_ ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35057116-35062147:-|nuORF 58.6788170122104 0.0268135626297836 4 [{I|L}T]N[RV]{I|L}{I|L}T{I|L} 9 -1 + 70.274 0.0 0.0 6.7463 6.7463 88.499 0.0 0.0 0.0 3.80983077361762 54.78909979586774 3.80983077361762 9.208187539523747 0 1.1861818737241734 1.5228787452803376 1.0356668758921828 0.3494850021680094 [{I|L}T]N[RV]{I|L}{I|L}T{I|L};[{I|L}T]GG[RV]{I|L}{I|L}T{I|L};[Q{I|L}]S[RV]{I|L}{I|L}T{I|L};{[TV]|[{I|L}S]}Q[RV]{I|L}{I|L}T{I|L};[KA]RVE{I|L}{I|L}T{I|L};{[VA]|[{I|L}G]}[RK]E{I|L}{I|L}T{I|L};[KA]E[RV]{I|L}{I|L}T{I|L};{[VA]|[{I|L}G]}AS[RV]{I|L}{I|L}T{I|L};{[QS]|[NT]}{I|L}[RV]{I|L}{I|L}T{I|L};{[TV]|[{I|L}S]}[AG][RV]{I|L}{I|L}T{I|L} 6.7463;5.8624;5.1703;4.9052;4.5642;4.5398;4.2984;4.1952;4.1889;4.0212 -;-;-;-;-;-;-;-;-;- 868 1 1.218 130404.1 1.0 12014 4998 17010 HBL1_DMSO_200M_050219_2,17014 HBL1_DMSO_200M_050219_2,17014,NKINVKLTL False False RIVSQLLTL 90.089428 521.835131824017 2590707.0 17010.0 ENSG00000165280|ENST00000358901|VCP;;ENST00000493886.5_1_9:35057116-35062147:-|nuORF 3.639069398244222 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17015 90.103 800.0 338010.0 25 0 35431.0 + 18405 KVVDVVRNLVF 11 142 644.392902201826 1286.771251470452 2 644.3929321169853 MULTI CID FTMS 0 0 0 17010 160950.71875 0.471349864427118 -1 0.1048812866210937 5 Unmodified _KVVDVVRNLVF_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 112.04118876639724 0.016203247773655 4 KVVDVV{[VA]|[{I|L}G]}NVV{M(Oxidation (M))|F} 12 3 + 86.614 0.0 0.0 6.7311 6.7311 75.314 0.0 0.0 0.0 48.06920969104901 3.198622098669404 3.198622098669404 0.3881769599827294 0 3.538106835214472 1.0969100130080565 0.0 0.2742275032520141 KVVDVV{[VA]|[{I|L}G]}NVV{M(Oxidation (M))|F};KVVDVV[NG]V{I|L}V{M(Oxidation (M))|F};KVVDV[R{I|L}]NVV{M(Oxidation (M))|F};KVVDV[RN]V{I|L}V{M(Oxidation (M))|F};VVKDVVQAA{I|L}V{M(Oxidation (M))|F};VVKDVQVAA{I|L}V{M(Oxidation (M))|F};VVKDVQG{I|L}A{I|L}V{M(Oxidation (M))|F};VVKDVVQRVV{M(Oxidation (M))|F};VVKDVVQVGVV{M(Oxidation (M))|F};KVVDVV{[MG]|[TS]}[K{I|L}]S{I|L} 6.7311;6.7009;6.4989;6.4688;5.8097;5.5088;5.4117;5.3198;5.2904;5.1729 -;-;-;-;-;-;-;-;-;- 13225 + 1 1.218 208648.0 0.7599999904632568 12015 4998 17010 HBL1_DMSO_200M_050219_2,17015 HBL1_DMSO_200M_050219_2,17015,KVVDVVRNLVF True True KVVDVVRNLVF 90.103265 644.392932116985 5963584.5 17010.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1 7.912741343180339 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17016 90.112 500.0 469810.0 25 0 53291.0 + 35417 STIRLLTSL 9 184 502.3111674916098 1002.6077820500196 2 502.3122741580009 MULTI CID FTMS 0 0 0 17010 129595.546875 0.0173882660693359 -3 0.3977737426757812 6 Unmodified _STIRLLTSL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 103.82355648334676 0.0089708497247674 4 {[TV]|[{I|L}S]}TR{I|L}{I|L}TS{I|L} 9 2 + 84.848 0.0 0.0 8.4627 8.4627 83.179 0.0 0.0 0.0 2.244237387763093 14.973024840566469 2.244237387763093 2.244237387763093 0 1.2302046884880935 1.3010299956639813 1.774227503252014 0.2742275032520141 {[TV]|[{I|L}S]}TR{I|L}{I|L}TS{I|L};{[MG]|[TS]}{I|L}R{I|L}{I|L}TS{I|L};[{I|L}T]SR{I|L}{I|L}TS{I|L};{[TV]|[{I|L}S]}T{I|L}R{I|L}TS{I|L};{[MG]|[TS]}{I|L}{I|L}R{I|L}TS{I|L};[{I|L}T]S{I|L}R{I|L}TS{I|L};{I|L}{I|L}[KC]{I|L}{I|L}TS{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[TV]|[{I|L}S]}{I|L}{I|L}TS{I|L};[{M(Oxidation (M))|F}V]T{I|L}K{I|L}SVP;[{M(Oxidation (M))|F}V]T{I|L}K{I|L}PSV 8.4627;8.2389;7.7204;7.4653;7.2415;6.723;5.6601;5.524;3.4623;3.3954 -;+;-;-;-;-;-;-;-;- + 1961 1 1.218 175499.0 1.0 12016 4998 17010 HBL1_DMSO_200M_050219_2,17016 HBL1_DMSO_200M_050219_2,17016,STIRLLTSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17017 90.123 605.0 266840.0 25 0 73601.0 + 31037 RLGYGAPA 8 112 402.7207798218052 803.4270067104104 2 402.7209960818291 MULTI CID FTMS 0 0 0 17010 120494.4609375 0.8689349367452316 -1 0.1048812866210937 7 Unmodified _RLGYGAPA_ REV__ENST00000367999.8_1_1:161136243-161136698:+|nuORF 5.760428011301431 0.7893668129297577 4 {I|L} 1 -1 10.837 0.0 0.0 1.3489 0.0 0.0 672.3320798078698 0.0 672.3320798078698 0.0 1.9640018450981327 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3489 + + 26 + 1 1.218 126845.5 1.0 12017 4998 17010 HBL1_DMSO_200M_050219_2,17017 HBL1_DMSO_200M_050219_2,17017,RLGYGAPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17018 90.136 800.0 211000.0 25 0 15375.0 + -1 WLSRMVLPFSR 11 142 704.3793605178364 1406.7441681024727 2 704.8823730349541 MULTI CID FTMS 0 0 0 17010 116946.828125 0.3102929870755286 -1 0.1048812866210937 8 Oxidation (M) _WLSRM(Oxidation (M))VLPFSR_ REV__ENST00000489226.5_1_9:130492547-130493681:+|nuORF 21.59015148037692 0.5852593066373742 4 {I|L}[PG]VK[KS]QE 9 -1 45.753 0.0 0.0 3.2524 0.0 0.0 422.1790568737602 0.0 422.1790568737602 0.0 24.61690491447857 0.0 0.0 0 1.424742501084005 0.0 1.564909327626439 0.6549471895720985 {I|L}[PG]VK[KS]QE 3.2524 - 1771 + 1 1.218 124643.1 0.6399999856948853 12018 4998 17010 HBL1_DMSO_200M_050219_2,17018 HBL1_DMSO_200M_050219_2,17018,WLSRMVLPFSR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17019 90.152 800.0 175450.0 25 0 17479.0 + 38888 TVLAIDAIHQL 11 129 597.34802729834 1192.6815016634798 2 597.3486205935478 MULTI CID FTMS 0 0 0 17010 107040.0390625 1.0 0 0.0 9 Unmodified _TVLAIDAIHQL_ ENSG00000211455|ENST00000389032|STK38L;nc|ENSG00000211455|Q9Y2H1-2|STK38L 78.06048673739656 0.0090990320965632 4 {[TV]|[{I|L}S]}{I|L}A{I|L}DA{I|L}HQ{I|L} 11 0 + 93.686 0.0 0.0 7.8551 7.8551 93.36 0.0 0.0 0.0 63.6656788893177 11.469622597206468 11.469622597206468 11.620095109179005 0 1.305462187404089 2.0 0.805462187404089 1.0629529932484498 + + {[TV]|[{I|L}S]}{I|L}A{I|L}DA{I|L}HQ{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L}W{I|L}HQ{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L}DA{I|L}H[AG]{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L}W{I|L}H[AG]{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L}{[CA]|SS}[YV]Q{I|L};{[TV]|[{I|L}S]}{I|L}AC[VP]{I|L}HQ{I|L};{[TV]|[{I|L}S]}{I|L}A{I|L}{[CA]|SS}{[TV]|[{I|L}S]}R{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{I|L}{[QN]|[E{I|L}]|[KN]}GA{I|L}HQ{I|L};{[TV]|[{I|L}S]}{I|L}{[QN]|[E{I|L}]|[KN]}Q{I|L}HQ{I|L};{[TV]|[{I|L}S]}{I|L}[W{I|L}]A{I|L}HQ{I|L} 7.8551;6.8808;6.1985;5.2212;5.1108;5.1038;4.8126;4.7654;4.4665;4.3403 +;-;-;-;-;-;-;-;-;- + 5211 + 1 1.218 106238.1 0.550000011920929 12019 4998 17010 HBL1_DMSO_200M_050219_2,17019 HBL1_DMSO_200M_050219_2,17019,TVLAIDAIHQL True True TVLAIDAIHQL 90.151804 597.348620593548 1030160.75 17010.0 nc|ENSG00000211455|Q9Y2H1-2|STK38L;;ENSG00000211455|ENST00000389032|STK38L 6.129592100779216 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17020 90.166 800.0 167290.0 25 0 42956.0 + 8156 EPPAVLLL 8 129 426.26472362634 850.51489431948 2 426.2624084353447 MULTI CID FTMS 0 0 0 17010 106470.671875 0.3055801954601665 9 -0.9187774658203124 10 Unmodified _EPPAVLLL_ ENSG00000133101|ENST00000255465|CCNA1;nc|ENSG00000133101|P78396-2|CCNA1;nc|ENSG00000133101|P78396|CCNA1 18.13498045792455 0.6430038125133779 4 {[HG]|PP}EA{I|L}V{I|L}{I|L} 8 4 {[HG]|PP}EA{I|L}V + + 15.701 -4.8843 -0.80554 1.8461 1.8461 44.48 0.0 0.0 0.0 0.0 7.028937514676484 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[HG]|PP}EA{I|L}V{I|L}{I|L} 1.8461 - 85 + 1 1.218 106727.5 0.4399999976158142 12020 4998 17010 HBL1_DMSO_200M_050219_2,17020 HBL1_DMSO_200M_050219_2,17020,EPPAVLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17021 90.181 800.0 127080.0 25 0 15953.0 + -1 IELSKMIVLS 10 121 574.8331868628128 1147.6518207924255 2 574.8340942263603 MULTI CID FTMS 0 0 0 17010 100448.3046875 0.8327898262891164 1 -0.1639556884765625 11 Oxidation (M) _IELSKM(Oxidation (M))IVLS_ REV__ENSG00000140471|ENST00000314742|LINS1;REV__ENST00000559149.5_1_15:101113500-101121059:-|nuORF;REV__nc|ENSG00000140471|Q8NG48-2|LINS1;REV__nc|ENSG00000140471|Q8NG48-3|LINS1 22.736283301280096 0.4578556481593033 4 {M(Oxidation (M))|F}S{I|L} 3 -1 16.387 0.0 0.0 1.4279 0.0 0.0 782.4816985773849 0.0 782.4816985773849 0.0 4.604700946801959 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 {M(Oxidation (M))|F}S{I|L} 1.4279 - 277 + 1 1.218 82289.0 0.5199999809265137 12021 4998 17010 HBL1_DMSO_200M_050219_2,17021 HBL1_DMSO_200M_050219_2,17021,IELSKMIVLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17022 90.194 800.0 192380.0 25 0 16069.0 -1 VEICEEKYPDI 11 89 697.8268149467682 1393.6390769603363 2 697.8268920779228 MULTI CID FTMS 0 0 0 17010 91329.96875 0.4746878716164553 -1 0.1048812866210937 12 Carbamidomethyl (C) _VEIC(Carbamidomethyl (C))EEKYPDI_ ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-7|DIAPH3 9.38312468134398 0.8308777417566128 4 {NN|[MP]|[D{I|L}]|[EV]}[EP]{I|L}{[CA]|SS}{I|L}{I|L}{I|L} 10 -1 51.417 0.0 0.0 3.6894 0.0 0.0 0.0 310.0148394612999 310.0148394612999 29.48867887474796 0.0 0.0 0.0 0 1.3807196863200843 1.3010299956639813 0.6382104921644451 0.7302046884880937 {NN|[MP]|[D{I|L}]|[EV]}[EP]{I|L}{[CA]|SS}{I|L}{I|L}{I|L} 3.6894 - 288 1 1.218 119750.3 0.4699999988079071 12022 4998 17010 HBL1_DMSO_200M_050219_2,17022 HBL1_DMSO_200M_050219_2,17022,VEICEEKYPDI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17023 90.208 800.0 239740.0 25 0 25226.0 + 10215 FQITPDKIQF 10 142 618.8346913232758 1235.6548297133515 2 618.8348876833916 MULTI CID FTMS 0 0 0 17010 86979.5546875 0.4839045235714637 -1 0.1048812866210937 13 Unmodified _FQITPDKIQF_ ENSG00000141076|ENST00000314423|UTP4;ENST00000569800.5_1_16:69167425-69171817:+|nuORF;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 96.93554129104106 0.0088365951652222 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T[DP]K{I|L}Q{M(Oxidation (M))|F} 10 0 + 68.972 0.0 0.0 5.5818 5.5818 74.317 0.0 0.0 0.0 12.347771592316406 1.5764470551545031 1.5764470551545031 2.143882645535584 0 2.024227503252014 0.8860566476931632 1.1237125054200234 1.1421590589602533 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}T[DP]K{I|L}Q{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}TEKT{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}TK[DP]{I|L}Q{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}TKE[VP]Q{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}TKE{I|L}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}TK{M(Oxidation (M))|F}[VP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}T{I|L}Q{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}TQ{I|L}{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}KT{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EKT{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.5818;5.4083;5.3752;5.3282;5.2648;4.7336;4.7166;4.7006;4.6712;4.6595 +;-;-;-;-;-;-;-;-;- + 5553 + 1 1.218 142306.7 0.4600000083446502 12023 4998 17010 HBL1_DMSO_200M_050219_2,17023 HBL1_DMSO_200M_050219_2,17023,FQITPDKIQF True True FQITPDKIQF 90.208293 618.8375 1535822.5 17010.0 nc|ENSG00000141076|Q969X6-3|UTP4;;ENST00000569800.5_1_16:69167425-69171817:+|nuORF;;ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 6.171059767405192 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17024 90.223 800.0 197500.0 25 0 38503.0 -1 0 105 1092.5260276991448 2183.03750246509 2 1092.526416003704 MULTI CID FTMS 0 0 0 17010 88790.0546875 0.783823755077297 -7 0.7076187133789062 14 4 APPPPPP{[QN]|[E{I|L}]|[KN]} 9 -1 71.225 0.0 0.0 3.2627 0.0 0.0 1269.5726109629395 0.0 1269.5726109629395 0.0 27.20352645197101 0.0 0.0 0 1.5 0.0 0.2887254899964357 1.960409376976188 APPPPPP{[QN]|[E{I|L}]|[KN]} 3.2627 - 9401 + 1 1.218 100453.7 0.449999988079071 12024 4998 17010 HBL1_DMSO_200M_050219_2,17024 HBL1_DMSO_200M_050219_2,17024, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17026 90.228 11.0 3745000.0 25 0 534040.0 + 26529 NVIDNLIVA 9 69 485.7819795896355 969.549406246071 2 485.7827026247978 MULTI CID FTMS 0 0 0 17025 3749129.0 0.0449342666299246 3 -0.2479705810546875 1 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 36.12702656103203 0.0967173616627612 4 {[NV]|[RG]}EVN{I|L} 6 5 27.369 0.0 0.0 2.8228 0.0 0.0 0.0 298.1752103551124 298.1752103551124 12.759621790487683 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 {[NV]|[RG]}EVN{I|L} 2.8228 - 325 1 1.229 37620.0 1.0 12025 4999 17025 HBL1_DMSO_200M_050219_2,17026 HBL1_DMSO_200M_050219_2,17026,NVIDNLIVA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17027 90.229 16.0 2891100.0 25 0 240530.0 + 35441 STLHLVLRL 9 66 351.2257507279637 1050.6554227840911 3 351.2258483767509 MULTI CID FTMS 0 0 0 17025 2551644.5 0.1259434861413742 3 -0.2479705810546875 2 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 30.63653989081413 0.1413794767160703 4 {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}] 9 0 + 44.648 0.0 0.0 4.2496 4.2496 70.513 0.0 0.0 0.0 13.948609846456073 8.529747636836952 8.529747636836952 3.0102999566398125 0 0.2887254899964357 0.0 0.0 0.2887254899964357 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}];{[MG]|[TS]}{I|L}{I|L}HV{I|L}[R{I|L}];{[MG]|[TS]}{I|L}H{I|L}{I|L}V[R{I|L}];{[MG]|[TS]}{I|L}{I|L}H{I|L}V[R{I|L}] 4.2496;3.9631;3.6765;3.39 +;-;-;- + 88 + 1 1.229 44434.9 1.0 12026 4999 17025 HBL1_DMSO_200M_050219_2,17027 HBL1_DMSO_200M_050219_2,17027,STLHLVLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17028 90.23 8.7 5341900.0 25 0 970250.0 + 4439 DAWKELTIV 9 77 537.7959786908501 1073.5774044485 2 537.7957641482353 MULTI CID FTMS 0 0 0 17025 4686492.0 1.0 0 0.0 3 Unmodified _DAWKELTIV_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 39.94969957227396 0.0757326808254658 4 [{I|L}T]EKWW{I|L}V 8 6 + 49.161 0.0 0.0 4.5792 4.5792 68.592 0.0 0.0 0.0 7.48606012441968 27.19351057653448 7.48606012441968 1.3033376849500655 0 0.8182503180159344 1.154901959985743 1.305462187404089 0.0 [{I|L}T]EKWW{I|L}V;[{I|L}T]EKWGE{I|L}V;[{I|L}T]PAAW{[CT]|[{M(Oxidation (M))|F}G]}{I|L}V;[{I|L}T]PAA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E{I|L}V;[TP]{I|L}AAW{[CT]|[{M(Oxidation (M))|F}G]}{I|L}V;[TP]{I|L}AA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E{I|L}V;[TP][RV]W{[CT]|[{M(Oxidation (M))|F}G]}{I|L}V;[TP][RV]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E{I|L}V;[WK][CS][EP]{I|L}{I|L}V;{[SA]|[TG]}R[CS]K[NP]{I|L}V 4.5792;4.4578;2.0347;1.7543;1.6101;1.3297;1.282;1.0016;0.76989;0.4243 -;-;-;-;-;-;-;-;-;- 341 1 1.229 42224.1 1.0 12027 4999 17025 HBL1_DMSO_200M_050219_2,17028 HBL1_DMSO_200M_050219_2,17028,DAWKELTIV True True DAWKELTIV 90.230476 537.795764148235 37670932.0 17025.0 ENST00000420783.7_1_3:49044839-49051550:+|nuORF;;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;;ENST00000489684.2_1_3:49044864-49050780:+|nuORF;;ENSG00000178252|ENST00000608424|WDR6 6.683441162109375 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17029 90.232 12.0 5545200.0 25 0 434410.0 + 4188 DAPIVAHLW 9 85 511.2767915749069 1020.5390302166136 2 511.2772704958916 MULTI CID FTMS 0 0 0 17025 4478913.0 0.8498431393234746 -1 0.1639556884765625 4 Unmodified _DAPIVAHLW_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 59.79521254764295 0.0261954583213598 4 {[DA]|[EG]}P{I|L}VAH{I|L}W 9 0 + 65.87 0.0 0.0 6.4544 6.4544 91.651 0.0 0.0 0.0 30.00630971391878 10.94212497064703 10.94212497064703 25.50434735867583 0 0.6307196863200843 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}P{I|L}VAH{I|L}W;[{I|L}P]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AV{I|L}[HQ];[{I|L}P][WE]V{I|L}[HQ];[{I|L}P]V[WE]{I|L}[HQ];WP{I|L}[R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}];[{I|L}P]V[VP][MT][HQ];WRR[NS][R{M(Oxidation (M))|F}] 6.4544;3.9553;3.6155;3.2256;2.9918;1.5555;0.44581 +;-;-;-;-;-;- + 293 + 1 1.229 58380.8 1.0 12028 4999 17025 HBL1_DMSO_200M_050219_2,17029 HBL1_DMSO_200M_050219_2,17029,DAPIVAHLW True True DAPIVAHLW 90.231656 511.277270495892 150965964.0 17025.0 nc|ENSG00000110090|P50416-2|CPT1A;;ENSG00000110090|ENST00000265641|CPT1A 7.0887478192647295 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17030 90.233 19.0 3544400.0 25 0 694910.0 + 4949 DGLVVLKI 8 74 428.77872575526897 855.542898577338 2 428.7789489626884 MULTI CID FTMS 0 0 0 17025 3142641.5 1.0 0 0.0 5 Unmodified _DGLVVLKI_ ENSG00000147677|ENST00000521861|EIF3H;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 48.345845343767074 0.1470278396477103 4 [DG]{I|L}VV{I|L}K{I|L} 8 0 [DG]{I|L} + + 44.552 17.905 6.2795 5.2075 5.2075 53.397 0.0 0.0 0.0 0.0 26.647291836125568 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.2742275032520141 + + [DG]{I|L}VV{I|L}K{I|L} 5.2075 + + 83 + 1 1.229 59533.7 1.0 12029 4999 17025 HBL1_DMSO_200M_050219_2,17030 HBL1_DMSO_200M_050219_2,17030,DGLVVLKI False True DGLVVLKI 90.232833 428.778948962688 60176628.0 17025.0 ENSG00000147677|ENST00000521861|EIF3H;;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 2.2672928174336757 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17031 90.234 19.0 3514500.0 25 0 281410.0 + 29728 QPLPVILHV 9 78 508.31861358773176 1014.6226742422637 2 508.3191406130791 MULTI CID FTMS 0 0 0 17025 2878128.5 0.296100708840444 2 -0.1532363891601562 6 Unmodified _QPLPVILHV_ ENSG00000171681|ENST00000261168|ATF7IP;ENST00000537653.5_1_12:14576849-14628955:+|nuORF;nc|ENSG00000171681|Q6VMQ6-2|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 40.44857923139169 0.0729940656229577 4 [QP]{I|L}PV{I|L}{I|L}HV 9 0 + 48.096 0.0 0.0 4.7402 4.7402 76.023 0.0 0.0 0.0 5.642492736872597 5.543576623225931 5.543576623225931 5.543576623225931 0 0.8252574989159953 0.0 0.0 0.0 + + [QP]{I|L}PV{I|L}{I|L}HV;[QP]{I|L}PV{I|L}{I|L}VH 4.7402;4.1939 +;- + 152 + 1 1.229 57515.7 1.0 12030 4999 17025 HBL1_DMSO_200M_050219_2,17031 HBL1_DMSO_200M_050219_2,17031,QPLPVILHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17032 90.235 28.0 3088500.0 25 0 237210.0 + 35448 STLHLVLRL 9 83 526.3345197990178 1050.6544866648355 2 526.3351928591728 MULTI CID FTMS 0 0 0 17025 1734289.125 0.0968133793323044 3 -0.2479705810546875 7 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 75.76082778847304 0.0188720312721366 4 {[MG]|[TS]}{I|L}H{I|L}V{I|L}R{I|L} 9 0 + 72.7 0.0 0.0 6.9195 6.9195 76.841 0.0 0.0 0.0 0.7525749891599531 12.95745797034256 0.7525749891599531 0.7525749891599531 0 2.7302046884880937 0.0 0.0 0.6694451763165201 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}R{I|L};{I|L}{[MG]|[TS]}H{I|L}V{I|L}R{I|L};{[MG]|[TS]}{I|L}H{I|L}{I|L}VR{I|L};{I|L}{[MG]|[TS]}H{I|L}{I|L}VR{I|L};{[MG]|[TS]}{I|L}{I|L}HV{I|L}R{I|L};{I|L}{[MG]|[TS]}{I|L}HV{I|L}R{I|L};[H{I|L}]{[MG]|[TS]}{I|L}V{I|L}R{I|L};{[MG]|[TS]}{I|L}{I|L}H{I|L}VR{I|L};{I|L}{[MG]|[TS]}{I|L}H{I|L}VR{I|L};[H{I|L}]{I|L}{[MG]|[TS]}V{I|L}R{I|L} 6.9195;6.8479;6.3895;6.3179;6.1571;6.0855;5.9757;5.6271;5.5555;4.9268 +;-;-;-;-;-;-;-;-;- + 299 + 1 1.229 74948.7 1.0 12031 4999 17025 HBL1_DMSO_200M_050219_2,17032 HBL1_DMSO_200M_050219_2,17032,STLHLVLRL True True STLHLVLRL 90.235191 526.335192859173 1470030432.0 17025.0 ENSG00000143947|ENST00000272317|RPS27A;;chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC 5.097174644470215 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17033 90.237 62.0 839130.0 25 0 98439.0 + 33590 SIPDFPMHLA 10 69 564.2807342562144 1126.5469155792289 2 564.2817260622978 MULTI CID FTMS 0 0 0 17025 756056.8125 1.0 0 0.0 8 Unmodified _SIPDFPMHLA_ ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1 26.88365393820708 0.3646707531412818 4 {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}HA{I|L} 10 2 + 47.42 0.0 0.0 4.2093 4.2093 79.676 0.0 0.0 0.0 19.215651613548665 4.959371173213079 4.959371173213079 10.0648212752792 0 0.3252574989159953 2.0 0.0 0.0 {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}HA{I|L};{[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}[YR]{[ET]|[MV]};{[TV]|[{I|L}S]}P{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S{I|L};{[TV]|[{I|L}S]}[VS]D{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E]A{I|L};{[TV]|[{I|L}S]}P{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[YT]{[ET]|[MV]};{[TV]|[{I|L}S]}[VS]D{I|L}[YT]{[ET]|[MV]} 4.2093;3.3159;2.7367;2.2777;2.2313;1.6969 -;-;-;-;-;- 197 + 1 1.229 46048.3 1.0 12032 4999 17025 HBL1_DMSO_200M_050219_2,17033 HBL1_DMSO_200M_050219_2,17033,SIPDFPMHLA False True SIPDFPMHLA 90.236718 564.281726062298 43084674.0 17025.0 nc|ENSG00000148840|Q5VV67-2|PPRC1;;ENSG00000148840|ENST00000278070|PPRC1 6.725879510243733 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17034 90.238 72.0 944470.0 25 0 100070.0 + 12759 GVPELLQKI 9 84 498.808343739672 995.602134546144 2 498.8084289431572 MULTI CID FTMS 0 0 0 17025 714710.5625 0.7289806782049078 1 -0.0529403686523437 9 Unmodified _GVPELLQKI_ ENSG00000076513|ENST00000261739|ANKRD13A 43.85829265575387 0.0542763391141878 4 [VG]PE{I|L}{I|L}QK{I|L} 9 0 + 69.166 0.0 0.0 6.9471 6.9471 86.904 0.0 0.0 0.0 14.578343878162343 14.09256854528806 14.09256854528806 7.474250108400469 0 0.3252574989159953 2.0 0.0 0.6861818737241735 + + [VG]PE{I|L}{I|L}QK{I|L};[VG]{I|L}[EP]{I|L}QK{I|L};[VG]PE{I|L}{I|L}[AG]K{I|L};[VG]{I|L}[EP]{I|L}[AG]K{I|L};[VG]PE{I|L}[KQ]{I|L}{I|L};[VG]{I|L}[EP][KQ]{I|L}{I|L} 6.9471;6.1964;6.0222;5.2715;4.527;3.7762 +;-;-;-;-;- + 214 + 1 1.229 56972.3 1.0 12033 4999 17025 HBL1_DMSO_200M_050219_2,17034 HBL1_DMSO_200M_050219_2,17034,GVPELLQKI True True GVPELLQKI 90.238404 498.808428943157 40613644.0 17025.0 ENSG00000076513|ENST00000261739|ANKRD13A 4.645922819773356 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17035 90.24 82.0 819820.0 25 0 84764.0 + 2770 ATPEGIFLRV 10 66 551.8162483235393 1101.6179437138785 2 551.8168823122978 MULTI CID FTMS 0 0 0 17025 632340.4375 0.8497664652301542 -1 0.1639556884765625 10 Unmodified _ATPEGIFLRV_ ENSG00000107862|ENST00000369983|GBF1;nc|ENSG00000107862|Q92538-1|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;nc|ENSG00000107862|Q92538-3|GBF1 36.506200033944 0.1944608063770638 4 [TA]PEG{I|L}{M(Oxidation (M))|F}{I|L}[RV] 10 0 + 71.63 0.0 0.0 6.5022 6.5022 79.578 0.0 0.0 0.0 37.33288122256525 4.884381005764311 4.884381005764311 3.0102999566398125 0 0.3494850021680094 2.0 0.75 0.0 + + [TA]PEG{I|L}{M(Oxidation (M))|F}{I|L}[RV];[TA]PEVA{M(Oxidation (M))|F}{I|L}[RV];[TA]VPEA{M(Oxidation (M))|F}{I|L}[RV];[TA]PV{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}[RV];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}HTA{M(Oxidation (M))|F}{I|L}[RV];{[C(Carbamidomethyl (C))E]|[WC]}{I|L}{I|L}{[TV]|[{I|L}S]}{I|L}[RV] 6.5022;6.229;4.5888;3.7285;0.97968;0.68723 +;-;-;-;-;- + 122 + 1 1.229 57391.3 1.0 12034 4999 17025 HBL1_DMSO_200M_050219_2,17035 HBL1_DMSO_200M_050219_2,17035,ATPEGIFLRV False True ATPEGIFLRV 90.24026 551.816882312298 6129209.5 17025.0 ENSG00000107862|ENST00000369983|GBF1;;nc|ENSG00000107862|Q92538-1|GBF1;;nc|ENSG00000107862|Q92538-3|GBF1;;nc|ENSG00000107862|Q92538-2|GBF1 5.997831344604492 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17036 90.242 95.0 652210.0 25 0 65413.0 + 6564 EALRLFQV 8 78 488.2845071857869 974.554461438374 2 488.2847473025322 MULTI CID FTMS 0 0 0 17025 535564.625 0.692158974125764 -2 0.2688369750976562 11 Unmodified _EALRLFQV_ ENSG00000100297|ENST00000216122|MCM5;ENST00000493076.5_1_22:35806581-35817581:+|nuORF 128.3654064809346 7.602523600602331e-05 4 {[CP]|[EA]}{I|L}R{I|L}{M(Oxidation (M))|F}QV 8 0 + 61.887 0.0 0.0 6.3503 6.3503 87.822 0.0 0.0 0.0 29.960762528683706 41.45394248918264 29.960762528683706 9.262137858390815 0 1.3243923658886183 0.0 2.6861818737241734 0.0 + + {[CP]|[EA]}{I|L}R{I|L}{M(Oxidation (M))|F}QV;{[CP]|[EA]}{I|L}R{I|L}{M(Oxidation (M))|F}[AG]V;{[CP]|[EA]}{I|L}R{I|L}T{[CA]|SS}V;{[QV]|[N{I|L}]|[RA]|[KV]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}]EV 6.3503;5.3999;4.7713;1.1553 +;-;-;- + 118 1 1.229 54271.7 1.0 12035 4999 17025 HBL1_DMSO_200M_050219_2,17036 HBL1_DMSO_200M_050219_2,17036,EALRLFQV True True EALRLFQV 90.242331 488.284747302532 6348234.5 17025.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 5.918163776397705 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17037 90.245 106.0 861900.0 25 0 122720.0 22269 LPRPPRGQL 9 98 517.3181254860068 1032.6216980388135 2 518.3222534060478 MULTI CID FTMS 0 0 0 17025 534258.625 0.3727591423503541 4 -0.3496475219726562 12 Unmodified _LPRPPRGQL_ ENST00000436066.3_1_19:30165625-30165775:+|nuORF 13.50788311687929 0.4710407108020397 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P 3 7 28.2 0.0 0.0 2.7309 0.0 0.0 0.0 688.4231866464885 688.4231866464885 4.097112500669265 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P 2.7309 - 89 1 1.229 82787.2 1.0 12036 4999 17025 HBL1_DMSO_200M_050219_2,17037 HBL1_DMSO_200M_050219_2,17037,LPRPPRGQL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17038 90.247 105.0 724310.0 25 0 113250.0 + 28597 PVAEQLIIQ 9 95 505.7980539797721 0 505.7981445193291 PEAK CID FTMS 0 0 0 17025 523702.53125 0.7487316203457934 -2 0.2688369750976562 13 Unmodified _PVAEQLIIQ_ REV__ENSG00000159131|ENST00000381815|GART;REV__ENST00000424203.5_1_21:34876433-34900844:-|nuORF 36.12702656103203 0.0807574182900477 4 {I|L}V{I|L}VD 5 -1 31.74 0.0 0.0 3.1439 0.0 0.0 259.1513925281004 208.07290064029533 467.2242931683958 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.6549471895720984 0.0 {I|L}V{I|L}VD 3.1439 - 111 + 1 1.229 64283.8 1.0 12037 4999 17025 HBL1_DMSO_200M_050219_2,17038 HBL1_DMSO_200M_050219_2,17038,PVAEQLIIQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17039 90.25 161.0 421500.0 25 0 108980.0 + 1783 ALSDRLLL 8 84 450.779253661853 899.5439543905061 2 450.7794372439384 MULTI CID FTMS 0 0 0 17025 333516.96875 1.0 0 0.0 14 Unmodified _ALSDRLLL_ REV__ENSG00000141098|ENST00000268797|GFOD2;REV__ENST00000602522.1_1_16:67709060-67709966:-|nuORF;REV__nc|ENSG00000141098|Q3B7J2-2|GFOD2 34.10243960390752 0.3329570729325616 4 [{I|L}A]{[WT]|[RM]}A{I|L}{I|L}{I|L} 8 -1 + 47.969 0.0 0.0 5.3325 5.3325 75.339 0.0 0.0 0.0 7.501225267834002 16.40978057358332 7.501225267834002 3.137728966894713 0 0.9247425010840048 1.6989700043360187 0.3807196863200844 0.0 [{I|L}A]{[WT]|[RM]}A{I|L}{I|L}{I|L};[{I|L}A][MN]{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}[WK]D{I|L}{I|L};{I|L}{I|L}[MN]A{I|L}{I|L}{I|L};[{I|L}A][VS]{[RE]|[WV]}{I|L}{I|L};{I|L}{I|L}[WK]{I|L}D{I|L};{I|L}{I|L}[SG]{[RE]|[WV]}{I|L}{I|L} 5.3325;4.9837;4.4986;4.1831;3.7452;3.1849;3.019 -;-;-;-;-;-;- 239 1 1.229 59896.5 1.0 12038 4999 17025 HBL1_DMSO_200M_050219_2,17039 HBL1_DMSO_200M_050219_2,17039,ALSDRLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17040 90.253 159.0 403730.0 25 0 71495.0 + 16025 ITHEYLAI 8 97 480.26315906218406 958.511765191168 2 480.2636596560478 MULTI CID FTMS 0 0 0 17025 279723.9375 0.9800182248696664 -2 0.2688369750976562 15 Unmodified _ITHEYLAI_ REV__ENSG00000013503|ENST00000228347|POLR3B;REV__nc|ENSG00000013503|Q9NW08-2|POLR3B 24.67388899826682 0.525179942228231 4 [QP]E{M(Oxidation (M))|F}AA{I|L}[{I|L}A] 9 -1 + 53.918 0.0 0.0 5.6252 5.6252 82.054 0.0 0.0 0.0 19.303556944260336 5.642492736872597 5.642492736872597 7.7815125038364386 0 0.0 1.154901959985743 0.0 0.3494850021680094 [QP]E{M(Oxidation (M))|F}AA{I|L}[{I|L}A];[QP]EA{M(Oxidation (M))|F}A{I|L}[{I|L}A];[{I|L}A]D{[DS]|[MA]|[CV]|TT}AA{I|L}[{I|L}A];[QP]Y[PS]A{I|L}[{I|L}A];[{I|L}A]C(Carbamidomethyl (C)){NN|[MP]|[D{I|L}]|[EV]}A{I|L}[{I|L}A];[{I|L}A]D{[WS]|[C(Carbamidomethyl (C)){I|L}]}A{I|L}[{I|L}A];AA[DP]{M(Oxidation (M))|F}AA{I|L}[{I|L}A];[{I|L}A][CG]{NN|[MP]|[D{I|L}]|[EV]}A{I|L}[{I|L}A];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[PS]A{I|L}[{I|L}A];[QP]YVP[TA][{I|L}A] 5.6252;4.8133;3.6113;3.3549;3.1933;2.9298;2.5459;2.2326;2.1151;1.734 -;-;-;-;-;-;-;-;-;- 303 1 1.229 54596.3 1.0 12039 4999 17025 HBL1_DMSO_200M_050219_2,17040 HBL1_DMSO_200M_050219_2,17040,ITHEYLAI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17041 90.257 213.0 395230.0 25 0 66649.0 + 33322 SFVWHALDY 9 94 569.2694739253668 1136.5243949175335 2 569.2723876833916 MULTI CID FTMS 0 0 0 17025 256866.3125 0.4487089246856447 -2 0.2688369750976562 16 Unmodified _SFVWHALDY_ ENSG00000153201|ENST00000283195|RANBP2 56.17704186161178 0.0281986971544335 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VWHA{I|L}DY 9 0 + 63.254 0.0 0.0 5.5656 5.5656 75.876 0.0 0.0 0.0 10.41325298820567 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 1.8182503180159344 2.0 0.0 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VWHA{I|L}DY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VWHA{I|L}M{M(Oxidation (M))|F};[WH]VAYA{I|L}DY;[WH]VAYA{I|L}M{M(Oxidation (M))|F};[WH]AVYA{I|L}DY;[WH]VAY{M(Oxidation (M))|F}VDT;[WH]AVYA{I|L}M{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}HWVDT;[WH]AVY{M(Oxidation (M))|F}VDT;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}HW[PA]{M(Oxidation (M))|F} 5.5656;5.3007;4.6494;4.3845;4.2296;4.2105;3.9647;3.9355;3.7907;3.7643 +;-;-;-;-;-;-;-;-;- + 973 1 1.229 68990.2 1.0 12040 4999 17025 HBL1_DMSO_200M_050219_2,17041 HBL1_DMSO_200M_050219_2,17041,SFVWHALDY True True SFVWHALDY 90.257153 569.272387683392 5042747.0 17025.0 ENSG00000153201|ENST00000283195|RANBP2 8.126389980316162 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17042 90.262 243.0 423860.0 25 0 84321.0 + 41541 VPPAALISI 9 96 440.7786861799498 879.5428194266996 2 440.7789794802666 MULTI CID FTMS 0 0 0 17025 233753.21875 0.7588026745599994 -3 0.423858642578125 17 Unmodified _VPPAALISI_ ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1XR1-TP73|1|fusion;TBL1XR1-TP73|2|fusion;TBL1XR1-TP73|3|fusion;TBL1XR1-TP73|4|fusion;TBL1XR1-TP73|5|fusion;TBL1XR1-TP73|6|fusion 34.18733598223924 0.1073653526364521 4 [PA]PAV{I|L}{I|L}S{I|L} 9 2 + 35.851 0.0 0.0 4.0761 4.0761 74.137 0.0 0.0 0.0 9.787885441787594 12.48706382474066 9.787885441787594 6.020599913279629 0 0.8182503180159344 0.8239087409443188 0.0 0.0 [PA]PAV{I|L}{I|L}S{I|L};[PA]APV{I|L}{I|L}S{I|L};[PA]PAV{I|L}TV{I|L};[PA]PA{I|L}{I|L}VS{I|L};[PA]{I|L}A{I|L}PVS{I|L};[PA]APV{I|L}TV{I|L};[VP][VG]{I|L}PVS{I|L};[PA]A{I|L}{I|L}PVS{I|L};[VP]KPVEV{I|L};[PA]{I|L}A[VP]{I|L}S{I|L} 4.0761;3.3915;3.1653;2.6287;2.5068;2.4808;2.1674;2.1646;2.1095;2.0863 -;-;-;-;-;-;-;-;-;- 542 1 1.229 85245.8 1.0 12041 4999 17025 HBL1_DMSO_200M_050219_2,17042 HBL1_DMSO_200M_050219_2,17042,VPPAALISI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17043 90.265 169.0 197990.0 25 0 17654.0 + -1 FLAHSCIWV 9 66 566.7852606899074 0 566.7879516482353 PEAK CID FTMS 0 0 0 17025 226537.796875 1.0 0 0.0 18 Carbamidomethyl (C) _FLAHSC(Carbamidomethyl (C))IWV_ REV__ENSG00000105971|ENST00000222693|CAV2;REV__ENST00000495841.1_1_7:116140184-116146172:+|nuORF;REV__nc|ENSG00000105971|P51636-2|CAV2 9.347437153973935 0.3197567915069932 4 Y 1 -1 6.9897 0.0 0.0 0.61771 0.0 0.0 883.4033328038398 82.06684290103749 965.4701757048772 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.61771 - 12 + 1 1.229 33108.5 1.0 12042 4999 17025 HBL1_DMSO_200M_050219_2,17043 HBL1_DMSO_200M_050219_2,17043,FLAHSCIWV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17044 90.269 234.0 283370.0 25 0 32665.0 + 9196 FGGVLILIHR 10 94 375.5693297980315 1123.6861599942945 3 375.5693237185478 MULTI CID FTMS 0 0 0 17025 181362.484375 0.0063367950796382 13 -1.3320999145507812 19 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 24.020572477871973 0.4289996903560794 4 N{I|L}{I|L}{I|L}HR 6 5 35.368 0.0 0.0 3.1475 0.0 0.0 359.2192240252795 0.0 359.2192240252795 0.0 27.02323311335428 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 N{I|L}{I|L}{I|L}HR 3.1475 - 95 + 1 1.229 62132.4 1.0 12043 4999 17025 HBL1_DMSO_200M_050219_2,17044 HBL1_DMSO_200M_050219_2,17044,FGGVLILIHR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17045 90.276 382.0 361850.0 25 0 14936.0 -1 0 111 943.475313160726 1884.936073388252 2 943.974658191204 MULTI CID FTMS 0 0 0 17025 183904.796875 0.6493275352027126 6 -0.5395050048828125 20 4 [NP]N{I|L}{I|L}T 6 -1 41.806 0.0 0.0 2.2179 0.0 0.0 0.0 1229.5640787063303 1229.5640787063303 0.7391424206170427 0.0 0.0 0.0 0 0.0 0.958607314841775 0.4247425010840047 0.9802046884880936 [NP]N{I|L}{I|L}T 2.2179 - 1986 1 1.229 92133.5 1.0 12044 4999 17025 HBL1_DMSO_200M_050219_2,17045 HBL1_DMSO_200M_050219_2,17045, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17047 90.281 120.0 470130.0 25 0 41929.0 + -1 EPDGCRLDSMY 11 85 671.7750160124011 1341.5354790916022 2 671.7761108279228 MULTI CID FTMS 0 0 0 17046 512458.15625 0.9111473760091088 1 -0.1002960205078125 1 Carbamidomethyl (C) _EPDGC(Carbamidomethyl (C))RLDSMY_ REV__ENSG00000198780|ENST00000687041|FAM169A;REV__nc|ENSG00000198780|Q9Y6X4-2|FAM169A 10.799506525563784 0.8105043987015127 4 [EP]GDW{M(Oxidation (M))|F}C 7 -1 48.887 0.0 0.0 3.6441 0.0 0.0 0.0 504.2066576406834 504.2066576406834 22.94486029786043 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.1307196863200843 0.0 [EP]GDW{M(Oxidation (M))|F}C 3.6441 - 235 1 1.229 48171.8 1.0 12045 5000 17046 HBL1_DMSO_200M_050219_2,17047 HBL1_DMSO_200M_050219_2,17047,EPDGCRLDSMY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17048 90.288 376.0 280570.0 25 0 32603.0 + 15612 IQAESIPLI 9 131 492.2922154365257 982.5698779398514 2 492.2929565310478 MULTI CID FTMS 0 0 0 17046 160208.75 0.9295373255104932 -3 0.32177734375 2 Unmodified _IQAESIPLI_ ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1 36.12702656103203 0.0967173616627612 4 [{I|L}P][SG]SS{I|L} 7 6 31.047 0.0 0.0 3.1598 0.0 0.0 0.0 338.2072147689997 338.2072147689997 10.869923302085317 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.805462187404089 0.0 [{I|L}P][SG]SS{I|L} 3.1598 - 635 1 1.229 81373.9 1.0 12046 5000 17046 HBL1_DMSO_200M_050219_2,17048 HBL1_DMSO_200M_050219_2,17048,IQAESIPLI True True IQAESIPLI 90.288097 492.292956531048 2754612.25 17046.0 nc|ENSG00000079785|Q92499-2|DDX1;;ENSG00000079785|ENST00000233084|DDX1 0.8864728808403015 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17049 90.29 60.0 1119200.0 25 0 100250.0 23283 LSWPHVLEL 9 81 547.3052269867366 1092.595901040273 2 547.3059570193291 MULTI CID FTMS 0 0 0 17046 654120.375 0.9534169709238562 -1 0.0529403686523437 3 Unmodified _LSWPHVLEL_ ENSG00000205089|ENST00000378731|CCNI2;nc|ENSG00000205089|Q6ZMN8-2|CCNI2;nc|ENSG00000205089|Q6ZMN8-3|CCNI2 28.486842064014134 0.1687311288560894 4 YE{I|L} 3 7 32.945 0.0 0.0 3.0153 0.0 0.0 669.3966634032557 0.0 669.3966634032557 0.0 18.764100213633768 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.0 YE{I|L} 3.0153 - 58 1 1.229 60238.5 1.0 12047 5000 17046 HBL1_DMSO_200M_050219_2,17049 HBL1_DMSO_200M_050219_2,17049,LSWPHVLEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17050 90.292 141.0 298720.0 25 0 83414.0 -1 FRLLCLLRRWL 11 66 515.9779405994367 1544.91199239851 3 515.9781371951103 MULTI CID FTMS 0 0 0 17046 322938.40625 0.7645525179298308 -2 0.2168960571289062 4 Carbamidomethyl (C) _FRLLC(Carbamidomethyl (C))LLRRWL_ ENSG00000167733|ENST00000339423|HSD11B1L;ENST00000578046.1_2_19:5687695-5687953:+|nuORF;ENST00000581423.1_1_19:5687386-5687953:+|nuORF;nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L;nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L;nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L 0.0948413911109767 0.8747004676205551 4 {I|L} 1 -1 13.099 0.0 0.0 0.84788 0.0 0.0 1413.8170502371802 0.0 1413.8170502371802 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.84788 + + 19 + 1 1.229 46687.0 1.0 12048 5000 17046 HBL1_DMSO_200M_050219_2,17050 HBL1_DMSO_200M_050219_2,17050,FRLLCLLRRWL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17051 90.296 197.0 266130.0 25 0 51584.0 + 40597 VKWRRREQLL 10 73 461.9488409019351 1382.8246933060052 3 461.9483215212822 MULTI CID FTMS 0 0 0 17046 282632.53125 0.5610224703237939 -1 0.0529403686523437 5 Unmodified _VKWRRREQLL_ REV__ENSG00000099139|ENST00000674117|PCSK5 1.844237919475145 0.7181058121064529 4 {I|L} 1 -1 12.474 0.0 0.0 0.90208 0.0 0.0 1251.729613815574 0.0 1251.729613815574 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.90208 + + 15 + 1 1.229 55367.6 1.0 12049 5000 17046 HBL1_DMSO_200M_050219_2,17051 HBL1_DMSO_200M_050219_2,17051,VKWRRREQLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17052 90.299 137.0 440450.0 25 0 48594.0 + 33885 SLFPGKLEVV 10 80 544.8210487343874 1087.6275445355748 2 544.8217040896416 MULTI CID FTMS 0 0 0 17046 229060.984375 0.5150138056933502 -2 0.2168960571289062 6 Unmodified _SLFPGKLEVV_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 19.361941925380144 0.5226674314761524 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}P 4 6 38.94 0.0 0.0 3.5803 0.0 0.0 0.0 640.3675631158811 640.3675631158811 4.203555389302522 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}P 3.5803 + + 108 + 1 1.229 52577.6 1.0 12050 5000 17046 HBL1_DMSO_200M_050219_2,17052 HBL1_DMSO_200M_050219_2,17052,SLFPGKLEVV False True SLFPGKLEVV 90.298953 544.821704089642 12408215.0 17046.0 nc|ENSG00000177731|Q13045-3|FLII;;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;nc|ENSG00000177731|Q13045-2|FLII 5.645928859710693 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17053 90.313 800.0 91331.0 25 0 16332.0 -1 0 82 1164.8667645416274 3491.5784642250824 3 1165.535082995892 MULTI CID FTMS 0 0 0 17046 145152.65625 1.0 0 0.0 7 4 NVQY{M(Oxidation (M))|F}WQQA[CS]M[Q{I|L}] 14 -1 52.873 0.0 0.0 1.5143 0.0 0.0 1746.8065658869948 0.0 1746.8065658869948 0.0 36.67480748626268 0.0 0.0 0 0.0 0.0 0.0 0.0 NVQY{M(Oxidation (M))|F}WQQA[CS]M[Q{I|L}] 1.5143 - 3137 + 1 1.229 50088.0 0.550000011920929 12051 5000 17046 HBL1_DMSO_200M_050219_2,17053 HBL1_DMSO_200M_050219_2,17053, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17054 90.317 243.0 202320.0 25 0 9802.8 + 41226 VPFPKNFMSV 10 87 583.3066187561786 1164.5986845791572 2 583.3072387576103 MULTI CID FTMS 0 0 0 17046 124441.53125 0.7882645034633917 3 -0.2967071533203125 8 Unmodified _VPFPKNFMSV_ ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B 29.081581746732265 0.3152867722954398 4 [VP]{M(Oxidation (M))|F} 3 7 30.061 0.0 0.0 2.5813 0.0 0.0 0.0 818.386641480666 818.386641480666 3.739991445883884 0.0 0.0 0.0 0 0.805462187404089 1.154901959985743 0.0 0.0 + [VP]{M(Oxidation (M))|F} 2.5813 + + 107 + 1 1.229 42338.4 1.0 12052 5000 17046 HBL1_DMSO_200M_050219_2,17054 HBL1_DMSO_200M_050219_2,17054,VPFPKNFMSV False True VPFPKNFMSV 90.317364 583.30723875761 2414043.0 17046.0 ENSG00000173542|ENST00000309395|MOB1B;;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;;nc|ENSG00000173542|Q7L9L4-2|MOB1B;;ENSG00000114978|ENST00000396049|MOB1A 5.7969584465026855 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17055 90.328 586.0 210050.0 25 0 26474.0 + 45799 YYLTHGLYL 9 143 571.7997399990239 1141.5849270648478 2 572.3005859255791 MULTI CID FTMS 0 0 0 17046 118238.796875 0.8521301499893418 -1 0.0529403686523437 9 Unmodified _YYLTHGLYL_ ENSG00000101464|ENST00000217446|PIGU;nc|ENSG00000101464|Q9H490-2|PIGU 44.40701690623563 0.0526327925666318 4 [{I|L}T]HG{I|L}YYY{I|L} 9 4 + 37.044 0.0 0.0 3.245 3.245 67.495 0.0 0.0 0.0 4.072880170965526 5.686814654273679 4.072880170965526 3.0102999566398125 0 0.6677353201839438 1.2218487496163564 0.5629529932484498 0.0 [{I|L}T]HG{I|L}YYY{I|L};[{I|L}T]HGY{I|L}YY{I|L};{[TV]|[{I|L}S]}[HA]{I|L}YYY{I|L};{[TV]|[{I|L}S]}[HA]Y{I|L}YY{I|L};[{I|L}T]{I|L}{[HG]|PP}YYY{I|L};[{I|L}T]HGYY{I|L}Y{I|L};{[TV]|[{I|L}S]}[HA]YY{I|L}Y{I|L};YY{I|L}THH{I|L}PV;YY{I|L}THH[VP]{I|L};{I|L}{I|L}T{[HG]|PP}YYY{I|L} 3.245;2.9813;2.8882;2.6245;2.5455;2.5209;2.1641;2.1319;2.0173;1.9698 -;-;-;-;-;-;-;-;-;- 1423 1 1.229 94259.3 1.0 12053 5000 17046 HBL1_DMSO_200M_050219_2,17055 HBL1_DMSO_200M_050219_2,17055,YYLTHGLYL True True YYLTHGLYL 90.327651 571.7996 1994472.75 17046.0 ENSG00000101464|ENST00000217446|PIGU;;nc|ENSG00000101464|Q9H490-2|PIGU 4.660811265309651 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17056 90.334 344.0 297490.0 25 0 34855.0 + 45040 YPWGVVQV 8 107 474.2546205765142 946.4946882198284 2 474.2532836794853 MULTI CID FTMS 0 0 0 17046 110602.7890625 0.7460511948701842 -2 0.2168960571289062 10 Unmodified _YPWGVVQV_ ENSG00000138758|ENST00000264893|SEPTIN11;ENSG00000164402|ENST00000378719|SEPTIN8;ENSG00000186522|ENST00000397712|SEPTIN10;ENST00000468616.5_1_2:110303765-110325397:-|nuORF;ENST00000483047.5_1_2:110321941-110325397:-|nuORF;ENST00000506047.1_1_4:77936059-77941836:+|nuORF;ENST00000517342.1_1_8:57389817-57390279:-|nuORF;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;nc|ENSG00000164402|Q92599-2|SEPTIN8;nc|ENSG00000164402|Q92599-3|SEPTIN8;nc|ENSG00000164402|Q92599-4|SEPTIN8;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;nc|ENSG00000186522|Q9P0V9-3|SEPTIN10 30.19836241096484 0.408853459428176 4 [WP]GVYV{[QV]|[N{I|L}]|[RA]|[KV]} 8 2 + 30.512 0.0 0.0 3.2237 3.2237 64.668 0.0 0.0 0.0 1.638568026386693 6.989700043360188 1.638568026386693 1.638568026386693 0 0.2887254899964357 0.0 0.0 0.0 [WP]GVYV{[QV]|[N{I|L}]|[RA]|[KV]};YY{I|L}YV{[QV]|[N{I|L}]|[RA]|[KV]};[WP]RYV{[QV]|[N{I|L}]|[RA]|[KV]};[WP]GVVY{[QV]|[N{I|L}]|[RA]|[KV]};YY{I|L}VY{[QV]|[N{I|L}]|[RA]|[KV]};[WP]RVY{[QV]|[N{I|L}]|[RA]|[KV]};[WP]GYVV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}GVV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}RV{[QV]|[N{I|L}]|[RA]|[KV]};[WP]YGVV{[QV]|[N{I|L}]|[RA]|[KV]} 3.2237;3.0505;3.0505;2.9056;2.7325;2.7325;2.7196;2.3958;2.2155;2.0835 -;-;-;-;-;-;-;-;-;- 356 1 1.229 84084.1 1.0 12054 5000 17046 HBL1_DMSO_200M_050219_2,17056 HBL1_DMSO_200M_050219_2,17056,YPWGVVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17057 90.348 800.0 185040.0 25 0 19409.0 + 34018 SLITPLQAV 9 165 471.2866826389215 940.558812344643 2 471.2855407595634 MULTI CID FTMS 0 0 0 17046 96173.359375 0.391115231825448 2 -0.1950302124023437 11 Unmodified _SLITPLQAV_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 41.8396318013385 0.0653578398400075 4 {[TV]|[{I|L}S]}{I|L}TP{I|L} 6 3 40.328 0.0 0.0 4.2876 0.0 0.0 0.0 313.155711108568 313.155711108568 20.49471895720984 0.0 0.0 0.0 0 1.1989700043360187 1.6989700043360187 0.0 0.0 + {[TV]|[{I|L}S]}{I|L}TP{I|L} 4.2876 + + 772 1 1.229 116065.0 0.4099999964237213 12055 5000 17046 HBL1_DMSO_200M_050219_2,17057 HBL1_DMSO_200M_050219_2,17057,SLITPLQAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17058 90.363 800.0 131430.0 25 0 11284.0 + 30734 RGLDVPQVSLI 11 139 598.8532499344974 1195.6919469357947 2 598.8538696169853 MULTI CID FTMS 0 0 0 17046 85359.625 0.9618251772100038 1 -0.1002960205078125 12 Unmodified _RGLDVPQVSLI_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78110025-78110175:-|nuORF 34.221707139014875 0.3014076866608453 4 [{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[QP]VS{I|L}{I|L} 11 4 + 47.796 0.0 0.0 3.9974 3.9974 66.502 0.0 0.0 0.0 1.4072368796750112 15.070623213458028 1.4072368796750112 1.4072368796750112 0 0.7614393726401688 0.8239087409443188 0.7742275032520141 0.0 [{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[QP]VS{I|L}{I|L};{I|L}{I|L}QW[QP]VS{I|L}{I|L};{I|L}{I|L}AGW[QP]VS{I|L}{I|L};[{I|L}A]{I|L}GW[QP]VS{I|L}{I|L};{I|L}{I|L}GAW[QP]VS{I|L}{I|L};[{I|L}A]VAW[QP]VS{I|L}{I|L};[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[QP]W{I|L}{I|L};{I|L}{I|L}AA[DG][QP]VS{I|L}{I|L};[{I|L}A]{I|L}A[DG][QP]VS{I|L}{I|L};[AG][KA]NV[QP]VS{I|L}{I|L} 3.9974;3.8797;3.845;3.7931;3.7228;3.6709;3.4474;3.4332;3.3812;3.3756 -;-;-;-;-;-;-;-;-;- 1548 1 1.229 83739.8 0.5 12056 5000 17046 HBL1_DMSO_200M_050219_2,17058 HBL1_DMSO_200M_050219_2,17058,RGLDVPQVSLI False True RGLDVPQVSLI 90.362686 598.853869616985 990867.4375 17046.0 ENSG00000141543|ENST00000649764|EIF4A3;;ENST00000575978.1_1_17:78110025-78110175:-|nuORF 6.587568442026774 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17059 90.377 800.0 55256.0 25 0 8707.3 -1 0 65 1066.8613686393526 3197.562276518258 3 1067.196582019329 MULTI CID FTMS 0 0 0 17046 76362.2109375 1.0 0 0.0 13 4 VM[EP] 4 -1 14.693 0.0 0.0 0.4595 0.0 0.0 2723.3060683995204 0.0 2723.3060683995204 0.0 4.23516269895728 0.0 0.0 0 0.0 0.0 0.0 0.0 VM[EP] 0.4595 - 42 1 1.229 37890.0 0.449999988079071 12057 5000 17046 HBL1_DMSO_200M_050219_2,17059 HBL1_DMSO_200M_050219_2,17059, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17061 90.381 8.3 6867600.0 25 0 717080.0 + 35418 STIRLLTSL 9 72 502.3111674916098 1002.6077820500196 2 502.3113891482353 MULTI CID FTMS 0 0 0 17060 7453046.0 1.0 0 0.0 1 Unmodified _STIRLLTSL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 74.19965305603844 0.0194755241623067 4 {[MG]|[TS]}{I|L}R{I|L}{I|L}TS{I|L} 9 0 + 72.404 0.0 0.0 7.2216 7.2216 95.641 0.0 0.0 0.0 3.748162098248997 59.21688296721753 3.748162098248997 72.40447059346165 0 1.9291746928241125 0.0 1.41944517631652 0.3054621874040891 + + {[MG]|[TS]}{I|L}R{I|L}{I|L}TS{I|L} 7.2216 + + 141 1 1.242 47222.4 1.0 12058 5001 17060 HBL1_DMSO_200M_050219_2,17061 HBL1_DMSO_200M_050219_2,17061,STIRLLTSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17062 90.383 69.0 860230.0 25 0 207480.0 + -1 GTLITVCLL 9 84 495.2901401460561 988.565727358912 2 495.7928344607353 MULTI CID FTMS 0 0 0 17060 543464.8125 0.5394950728799809 2 -0.1964111328125 2 Carbamidomethyl (C) _GTLITVC(Carbamidomethyl (C))LL_ REV__ENST00000475645.1_1_6:106633518-106633809:-|nuORF 21.74664581756881 0.2544899275067181 4 {[SA]|[TG]}{I|L}{I|L}[YV]PN{I|L} 9 -1 + 27.659 0.0 0.0 2.7979 2.7979 70.829 0.0 0.0 0.0 4.161867382318228 10.969100130080562 4.161867382318228 6.117542809719623 0 0.0 0.0 0.0 0.6109243748081782 {[SA]|[TG]}{I|L}{I|L}[YV]PN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[YE]{I|L}[KP];{[SA]|[TG]}{I|L}{[TV]|[{I|L}S]}{I|L}C(Carbamidomethyl (C)){I|L}{I|L};{[SA]|[TG]}{I|L}{I|L}[YV]PQV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[YT]{I|L}[RP];{[SA]|[TG]}[YT]{I|L}P{I|L}[KP];[VP]AHMP{I|L}[KP];{[QV]|[N{I|L}]|[RA]|[KV]}[HN]GP{I|L}[KP];{[SA]|[TG]}{I|L}{I|L}[YV]PGG{I|L};[{I|L}P]GHMP{I|L}[KP] 2.7979;2.1791;1.9272;1.6883;1.6158;1.4025;1.3164;1.2596;1.2485;1.1728 -;-;-;-;-;-;-;-;-;- 313 + 1 1.242 52438.5 1.0 12059 5001 17060 HBL1_DMSO_200M_050219_2,17062 HBL1_DMSO_200M_050219_2,17062,GTLITVCLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17063 90.384 50.0 1353400.0 25 0 193010.0 + 10218 FQIVNPHLL 9 84 540.8138443086816 1079.6131356841631 2 540.8141967654228 MULTI CID FTMS 0 0 0 17060 819337.1875 0.4300470731370951 -3 0.3171920776367187 3 Unmodified _FQIVNPHLL_ ENSG00000167325|ENST00000300738|RRM1 34.10243960390752 0.1078313939113124 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VNP{I|L}H{I|L} 9 2 + 53.527 0.0 0.0 4.958 4.958 73.986 0.0 0.0 0.0 24.58220305641312 6.444474089518408 6.444474089518408 3.357921019231931 0 0.9247425010840048 1.0 0.0 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VNP{I|L}H{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VNPH{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VGGP{I|L}H{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VGGPH{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[TA]K{M(Oxidation (M))|F}{I|L}{I|L};[KP][VG]PNV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[KC]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][RP]NV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{I|L}[RH][TA]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][VG]PGGV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.958;4.647;4.1051;3.7941;3.1193;2.7205;2.3931;2.1154;1.9862;1.8716 -;+;-;-;-;-;-;-;-;- + 343 + 1 1.242 55196.4 1.0 12060 5001 17060 HBL1_DMSO_200M_050219_2,17063 HBL1_DMSO_200M_050219_2,17063,FQIVNPHLL True True FQIVNPHLL 90.384321 540.814196765423 36341924.0 17060.0 ENSG00000167325|ENST00000300738|RRM1 6.829363822937012 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17064 90.387 113.0 477220.0 25 0 42845.0 + 29160 KVIDYVPGIFQE 12 70 704.3793605178364 1406.7441681024727 2 704.3800536990166 MULTI CID FTMS 0 0 0 17060 398004.9375 0.7999852517111439 1 -0.0947341918945312 4 Unmodified _QFRSKRSKNQE_ ENSG00000163659|ENST00000295924|TIPARP 9.5439744041441 0.8301188422821563 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}[PG]VK{I|L}{[ET]|[MV]}E 12 8 + 39.822 0.0 0.0 2.8308 2.8308 63.045 0.0 0.0 0.0 0.3482656252898408 1.2299471884022497 0.3482656252898408 1.2299471884022497 0 1.75 0.0 0.2302046884880938 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}[PG]VK{I|L}{[ET]|[MV]}E;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KS]KV[PG]{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}[RP]K[KS]QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L}[RP]K{I|L}{[ET]|[MV]}E;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KS]K[RP]{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.8308;2.7434;2.617;2.2194;2.1319 -;-;-;-;- 191 + 1 1.242 49309.2 1.0 12061 5001 17060 HBL1_DMSO_200M_050219_2,17064 HBL1_DMSO_200M_050219_2,17064,QFRSKRSKNQE False False KVIDYVPGIFQE 90.386703 704.380053699017 9566494.0 17060.0 ENSG00000163659|ENST00000295924|TIPARP 9.526557127634684 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17065 90.39 193.0 390370.0 25 0 50137.0 + 21353 LPFLKNTVI 9 118 522.8258120656367 1043.6370711980733 2 522.8271972537041 MULTI CID FTMS 0 0 0 17060 268377.6875 1.0 0 0.0 5 Unmodified _LPFLKNTVI_ ENSG00000115446|ENST00000357765|UNC50;ENST00000393493.6_1_2:99232993-99234764:+|nuORF;ENST00000466492.1_1_2:99232887-99234764:+|nuORF 66.45667989310934 0.0225072657982126 4 {I|L}P{M(Oxidation (M))|F}{I|L}[VP]{M(Oxidation (M))|F}V{I|L} 9 3 + 68.573 0.0 0.0 6.5706 6.5706 79.027 0.0 0.0 0.0 16.771081482726373 14.221123714783095 14.221123714783095 2.678512937438313 0 1.9802046884880933 2.0 0.0 0.0 {I|L}P{M(Oxidation (M))|F}{I|L}[VP]{M(Oxidation (M))|F}V{I|L};[{I|L}P]{M(Oxidation (M))|F}K{[QS]|[NT]}V{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}K{[QS]|[NT]}{I|L}V{I|L};[{I|L}P]{M(Oxidation (M))|F}{I|L}{[ET]|[MV]}V{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}{I|L}{[ET]|[MV]}{I|L}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}K{[QS]|[NT]}V{I|L}{I|L};{I|L}P{M(Oxidation (M))|F}{I|L}[VP]{M(Oxidation (M))|F}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}K{[QS]|[NT]}{I|L}V{I|L};[{I|L}P]{M(Oxidation (M))|F}K{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}{[ET]|[MV]}V{I|L}{I|L} 6.5706;6.3139;6.2186;6.144;6.0487;5.2372;5.2079;5.1419;5.1394;5.0673 -;-;-;-;-;-;-;-;-;- 890 + 1 1.242 67632.3 1.0 12062 5001 17060 HBL1_DMSO_200M_050219_2,17065 HBL1_DMSO_200M_050219_2,17065,LPFLKNTVI True True LPFLKNTVI 90.390426 522.827197253704 2465513.75 17060.0 ENST00000393493.6_1_2:99232993-99234764:+|nuORF;;ENSG00000115446|ENST00000357765|UNC50;;ENST00000466492.1_1_2:99232887-99234764:+|nuORF 6.271722634633382 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17066 90.394 184.0 379420.0 25 0 28199.0 + 38725 TTYEGIFKTL 10 99 586.813520985239 1171.612489037278 2 586.8133422732353 MULTI CID FTMS 0 0 0 17060 251832.296875 0.3313479852353274 -3 0.3171920776367187 6 Unmodified _TTYEGIFKTL_ ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000432006.1_1_7:16625648-16626215:-|nuORF;ENST00000561539.1_1_16:28836974-28837213:+|nuORF;ENST00000562867.5_1_16:28834808-28837752:+|nuORF;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ENST00000566080.1_1_16:28837054-28837213:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 55.50274090549119 0.048383292844968 4 {[DS]|[MA]|[CV]|TT}YE{[VA]|[{I|L}G]}{M(Oxidation (M))|F}KT{I|L} 10 0 + 49.174 0.0 0.0 4.1971 4.1971 72.826 0.0 0.0 0.0 7.269987279362624 15.536049848239344 7.269987279362624 4.554687406276017 0 0.4247425010840047 0.0 1.4291746928241125 0.0 + + {[DS]|[MA]|[CV]|TT}YE{[VA]|[{I|L}G]}{M(Oxidation (M))|F}KT{I|L};{[DS]|[MA]|[CV]|TT}Y{M(Oxidation (M))|F}{I|L}WKT{I|L};{[DS]|[MA]|[CV]|TT}Y[W{I|L}]{M(Oxidation (M))|F}KT{I|L};{[DS]|[MA]|[CV]|TT}Y{M(Oxidation (M))|F}{I|L}G{I|L}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DS]|[MA]|[CV]|TT}Y{M(Oxidation (M))|F}{I|L}TKW{I|L};{[DS]|[MA]|[CV]|TT}Y{M(Oxidation (M))|F}{I|L}T{[NV]|[RG]}T{I|L};{[DS]|[MA]|[CV]|TT}Y{M(Oxidation (M))|F}{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{[DS]|[MA]|[CV]|TT}Y{M(Oxidation (M))|F}{I|L}T{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[DS]|[MA]|[CV]|TT}Y{M(Oxidation (M))|F}{I|L}T{[QV]|[N{I|L}]|[RA]|[KV]}TV 4.1971;3.8084;3.2771;2.8711;2.7208;2.4258;2.117;2.1091;1.8791 +;-;-;-;-;-;-;-;- + 246 + 1 1.242 56071.3 1.0 12063 5001 17060 HBL1_DMSO_200M_050219_2,17066 HBL1_DMSO_200M_050219_2,17066,TTYEGIFKTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17067 90.397 160.0 303830.0 25 0 42929.0 + 37335 TIYKDFVYI 9 83 581.3129999053438 1160.6114468774874 2 581.3128539919853 MULTI CID FTMS 0 0 0 17060 241690.78125 0.8606468718347954 -1 0.1002960205078125 7 Unmodified _TIYKDFVYI_ ENSG00000135686|ENST00000564996|KLHL36;ENST00000325279.4_1_16:84693236-84695736:+|nuORF;nc|ENSG00000135686|Q8N4N3-2|KLHL36 34.40172386719151 0.1061884637610825 4 [{I|L}T]{M(Oxidation (M))|F}KY[{I|L}T]Y{I|L} 9 4 + 62.298 0.0 0.0 5.3676 5.3676 85.062 0.0 0.0 0.0 22.24301211992909 46.81295286445945 22.24301211992909 12.21848749616356 0 1.274227503252014 2.0 0.6421590589602533 0.0 [{I|L}T]{M(Oxidation (M))|F}KY[{I|L}T]Y{I|L};[{I|L}T]{M(Oxidation (M))|F}[VG][H{I|L}]VY{I|L};[{I|L}T]{M(Oxidation (M))|F}KY[VP]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T][HV]E{[WT]|[RM]}Y{I|L};[{I|L}T]{M(Oxidation (M))|F}KQQ[NS][VP];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V[H{I|L}]R{M(Oxidation (M))|F}[VP];{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[H{I|L}]VY{I|L};{[{M(Oxidation (M))|F}D]|MM}VKY[{I|L}T]Y{I|L};{[{M(Oxidation (M))|F}D]|MM}VR[H{I|L}]VY{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{I|L}T]AMRY{I|L} 5.3676;4.3149;3.9614;3.4317;2.7372;2.5955;2.5773;2.4696;2.2102;1.8871 -;-;-;-;-;-;-;-;-;- 255 1 1.242 42682.5 1.0 12064 5001 17060 HBL1_DMSO_200M_050219_2,17067 HBL1_DMSO_200M_050219_2,17067,TIYKDFVYI True True TIYKDFVYI 90.397155 581.312853991985 2292944.75 17060.0 nc|ENSG00000135686|Q8N4N3-2|KLHL36;;ENSG00000135686|ENST00000564996|KLHL36;;ENST00000325279.4_1_16:84693236-84695736:+|nuORF 3.9120126565297446 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17068 90.401 215.0 492670.0 25 0 57386.0 + 32128 RVPDFILEKI 10 85 615.3663614076636 1228.718169882127 2 615.3663207888603 MULTI CID FTMS 0 0 0 17060 207902.40625 0.2987441288486189 -2 0.1532363891601562 8 Unmodified _RVPDFILEKI_ ENSG00000198826|ENST00000361627|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A 74.7717668357584 0.0187829169580365 4 {[QN]|[E{I|L}]|[KN]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L} 10 4 + 71.577 0.0 0.0 5.8253 5.8253 56.015 0.0 0.0 0.0 0.2287874528033739 15.026975159433531 0.2287874528033739 0.0 0 1.579689690656103 0.8239087409443188 0.6421590589602533 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};{[QN]|[E{I|L}]|[KN]}[QP]{M(Oxidation (M))|F}{I|L}{I|L}EK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};{[TV]|[{I|L}S]}G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};[RV][DP]{M(Oxidation (M))|F}{I|L}{I|L}EK{I|L};{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}[EP]EK{I|L};{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}[EP]E{I|L}K;{[QN]|[E{I|L}]|[KN]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}TR{I|L};{[QN]|[E{I|L}]|[KN]}[QP]{M(Oxidation (M))|F}{I|L}{I|L}TR{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}TR{I|L} 5.8253;5.8253;5.8067;5.4242;5.3235;5.0921;4.9606;4.9502;4.9502;4.9316 -;-;-;-;+;-;-;-;-;- + 759 1 1.242 85877.3 1.0 12065 5001 17060 HBL1_DMSO_200M_050219_2,17068 HBL1_DMSO_200M_050219_2,17068,RVPDFILEKI True True RVPDFILEKI 90.401236 615.36632078886 11774824.0 17060.0 nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A;;nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A;;ENSG00000198826|ENST00000361627|ARHGAP11A 5.939418474833171 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17069 90.406 280.0 276740.0 25 0 51609.0 + 21415 LPGPILQSI 9 112 469.28954634606646 936.5645397589328 2 469.2894470095634 MULTI CID FTMS 0 0 0 17060 205723.734375 0.9726798535002034 -1 0.1002960205078125 9 Unmodified _LPGPILQSI_ ENSG00000132128|ENST00000617190|LRRC41;ENST00000469150.1_1_1:46763228-46764055:-|nuORF;nc|ENSG00000132128|Q15345-3|LRRC41 49.66892048692302 0.0410958345688192 4 [{I|L}P]GP{I|L}{I|L}QS{I|L} 9 0 + 50.524 0.0 0.0 5.3946 5.3946 75.142 0.0 0.0 0.0 17.420299789533402 22.05136871872881 17.420299789533402 3.0102999566398125 0 0.8182503180159344 1.5228787452803376 0.0 0.0 + + [{I|L}P]GP{I|L}{I|L}QS{I|L};[{I|L}P]GP{I|L}Q{I|L}S{I|L};[{I|L}P]G{I|L}P{I|L}QS{I|L};[{I|L}P]GP{I|L}{I|L}[AG]S{I|L};[{I|L}P]{I|L}GP{I|L}QS{I|L};[{I|L}P]G{I|L}PQ{I|L}S{I|L};[{I|L}P]GP{I|L}[AG]{I|L}S{I|L};[{I|L}P]{I|L}GPQ{I|L}S{I|L};[{I|L}P]G{I|L}P{I|L}[AG]S{I|L};[PG]{I|L}P{I|L}{I|L}QS{I|L} 5.3946;5.0732;4.5638;4.4115;4.3458;4.2424;4.09;4.0244;3.5806;3.5317 +;-;-;-;-;-;-;-;-;- + 273 1 1.242 66225.5 1.0 12066 5001 17060 HBL1_DMSO_200M_050219_2,17069 HBL1_DMSO_200M_050219_2,17069,LPGPILQSI True True LPGPILQSI 90.406388 469.289447009563 2376456.0 17060.0 ENSG00000132128|ENST00000617190|LRRC41;;ENST00000469150.1_1_1:46763228-46764055:-|nuORF;;nc|ENSG00000132128|Q15345-3|LRRC41 3.755103826522827 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17070 90.413 346.0 326110.0 25 0 21380.0 + 43237 WAYPRQVFI 9 134 590.3192579013175 1178.623962869435 2 590.3190185427666 MULTI CID FTMS 0 0 0 17060 194140.75 0.4861600781486661 -2 0.1532363891601562 10 Unmodified _WAYPRQVFI_ ENSG00000005700|ENST00000306270|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;ENST00000505222.5_1_6:82901346-82950269:-|nuORF;nc|ENSG00000005700|Q9P2D0-2|IBTK 82.5293158979368 0.0169039238599547 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPRQV{M(Oxidation (M))|F}{I|L} 9 0 + 73.277 0.0 0.0 6.2171 6.2171 86.474 0.0 0.0 0.0 14.041272861310771 14.041272861310771 14.041272861310771 9.208187539523747 0 1.8684151806525389 1.6989700043360187 0.0 1.7302046884880935 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPRQV{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YPR[AG]V{M(Oxidation (M))|F}{I|L};WAYPVV{[QG]|[NA]}{M(Oxidation (M))|F}{I|L};[HA][DP]PRQV{M(Oxidation (M))|F}{I|L};[QP]R[YV]{M(Oxidation (M))|F}AW{I|L};[QP]GV[YV]{M(Oxidation (M))|F}AW{I|L};[QP]R[YV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L};[QP]GV[YV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L};[QP]R[Y{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L};[QP]GV[Y{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L} 6.2171;5.4359;5.0258;2.253;2.1588;2.0528;1.5138;1.4078;0.7476;0.64159 +;-;-;-;-;-;-;-;-;- + 431 1 1.242 86782.4 1.0 12067 5001 17060 HBL1_DMSO_200M_050219_2,17070 HBL1_DMSO_200M_050219_2,17070,WAYPRQVFI True True WAYPRQVFI 90.412644 590.319018542767 3908764.0 17060.0 nc|ENSG00000005700|Q9P2D0-2|IBTK;;ENSG00000005700|ENST00000306270|IBTK;;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;;ENST00000505222.5_1_6:82901346-82950269:-|nuORF 7.079845587412517 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17071 90.416 156.0 391860.0 25 0 46052.0 + 34333 KMAEMLVEL 9 77 532.2794688099813 1062.5443846867624 2 532.2795287966728 MULTI CID FTMS 0 0 0 17060 170346.484375 0.3251799347813222 -3 0.3171920776367187 11 Unmodified _SLSLCWLEL_ ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1 21.74664581756881 0.2544899275067181 4 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L} 9 6 + 54.103 0.0 0.0 5.0918 5.0918 71.464 0.0 0.0 0.0 16.98970004336018 10.330145895351848 10.330145895351848 1.7609125905568137 0 0.6989700043360187 1.3010299956639813 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}CMK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}CKMV{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}CMKV{I|L}E{I|L};{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}M{I|L}VE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AKM{I|L}VE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AMK{I|L}VE{I|L};{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}MV{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AKMV{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AMKV{I|L}E{I|L} 5.0918;4.9261;4.6428;4.477;3.4928;3.4665;3.3007;3.0438;3.0174;2.8517 -;-;-;-;-;-;-;-;-;- 219 1 1.242 52435.4 1.0 12068 5001 17060 HBL1_DMSO_200M_050219_2,17071 HBL1_DMSO_200M_050219_2,17071,SLSLCWLEL False False KMAEMLVEL 90.415742 532.279528796673 9789014.0 17060.0 ENSG00000179010|ENST00000382581|MRFAP1;;ENSG00000178988|ENST00000320848|MRFAP1L1 3.447713931401571 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17072 90.43 800.0 170720.0 25 0 15390.0 + 18406 KVVDVVRNLVF 11 136 644.392902201826 1286.771251470452 2 644.3926269412041 MULTI CID FTMS 0 0 0 17060 154213.890625 0.4516208253271448 2 -0.1964111328125 12 Unmodified _KVVDVVRNLVF_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 64.69154705217129 0.0501048056983406 4 KVVDVRM[K{I|L}]S{I|L} 11 5 + 76.105 0.0 0.0 5.9144 5.9144 73.479 0.0 0.0 0.0 25.43633966870956 0.9904101382930292 0.9904101382930292 0.9904101382930292 0 2.110924374808178 0.8860566476931632 0.6549471895720985 0.3494850021680094 KVVDVRM[K{I|L}]S{I|L};KVVDVRNV{I|L}{M(Oxidation (M))|F}V;KVVDVVGM[K{I|L}]S{I|L};KVVDVRM[K{I|L}]TV;KVVDVR{I|L}GR{M(Oxidation (M))|F}V;KVVDVVGNV{I|L}{M(Oxidation (M))|F}V;KVVDVVGM[K{I|L}]TV;KVVDVVG{I|L}GR{M(Oxidation (M))|F}V;KVVDVRGGV{I|L}{M(Oxidation (M))|F}V;KVVDVVGGGV{I|L}{M(Oxidation (M))|F}V 5.9144;5.8374;5.7715;5.769;5.715;5.6945;5.6261;5.5721;5.128;4.7158 -;-;-;-;-;-;-;-;-;- 1084 + 1 1.242 107295.5 0.6600000262260437 12069 5001 17060 HBL1_DMSO_200M_050219_2,17072 HBL1_DMSO_200M_050219_2,17072,KVVDVVRNLVF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17073 90.443 800.0 121780.0 25 0 22373.0 33741 SLAETFWET 9 88 1083.498293672892 1082.491017206292 1 1084.501513659954 MULTI CID FTMS 0 0 0 17060 151235.1875 0.6947541355916776 2 -0.1964111328125 13 Unmodified _SLAETFWET_ ENSG00000134900|ENST00000376052|TPP2;ENST00000466153.5_1_13:103307300-103330663:+|nuORF;nc|ENSG00000134900|P29144|TPP2 21.74664581756881 0.2544899275067181 4 {[ET]|[MV]}W{M(Oxidation (M))|F}{I|L}YPQ 8 8 + 33.343 0.0 0.0 3.0802 3.0802 73.426 0.0 0.0 0.0 6.98970004336018 6.954321750294668 6.954321750294668 8.438718088259801 0 0.0 0.0 0.7302046884880938 0.0 {[ET]|[MV]}W{M(Oxidation (M))|F}{I|L}YPQ;{[ET]|[MV]}W[KS]{M(Oxidation (M))|F}GTQ;{[ET]|[MV]}W{M(Oxidation (M))|F}[KS]GTQ;{[ET]|[MV]}A[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}VTQ;[WE]T[KS]{M(Oxidation (M))|F}GTQ;[WE]T{M(Oxidation (M))|F}[KS]GTQ;[W{M(Oxidation (M))|F}]{[ET]|[MV]}{I|L}YPQ;[R{M(Oxidation (M))|F}]C{I|L}{M(Oxidation (M))|F}W[DP];{[ET]|[MV]}A[C(Carbamidomethyl (C))K]SYPQ;[W{M(Oxidation (M))|F}][C(Carbamidomethyl (C))K]DVTQ 3.0802;2.3006;2.277;2.2372;2.0226;1.9989;1.9042;1.7388;1.6822;1.6574 -;-;-;-;-;-;-;-;-;- 1791 1 1.242 65128.6 0.6200000047683716 12070 5001 17060 HBL1_DMSO_200M_050219_2,17073 HBL1_DMSO_200M_050219_2,17073,SLAETFWET False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17074 90.453 524.0 360520.0 25 0 30136.0 + 18925 LCLYWWSTL 9 168 592.7928300029424 1183.5711070726848 2 592.7934448122978 MULTI CID FTMS 0 0 0 17060 129511.296875 0.3154866852100426 -2 0.1532363891601562 14 Unmodified _LCLYWWSTL_ ENST00000313146.10_1_1:156697965-156698004:-|nuORF 38.15118350030904 0.0856056900103839 4 {[QN]|[E{I|L}]|[KN]}AR{I|L}ESTCY 10 7 + 46.353 0.0 0.0 3.9164 3.9164 73.584 0.0 0.0 0.0 8.667053245199625 12.90993430065847 8.667053245199625 6.020599913279625 0 0.4419628234359579 1.5228787452803376 1.6861818737241734 0.0 {[QN]|[E{I|L}]|[KN]}AR{I|L}ESTCY;{[QN]|[E{I|L}]|[KN]}AR{I|L}TDTCY;{[QN]|[E{I|L}]|[KN]}AR{I|L}SETCY;{[QN]|[E{I|L}]|[KN]}AR{I|L}ESG{M(Oxidation (M))|F}Y;{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}ESTCY;{[CP]|[EA]}{I|L}R{I|L}ESG{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AR{I|L}TDG{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AR{I|L}SEG{M(Oxidation (M))|F}Y;{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}TDTCY;[VP]S[VS]{I|L}ESG{M(Oxidation (M))|F}Y 3.9164;3.4077;3.3258;3.2251;3.0547;3.0122;2.7164;2.6345;2.546;2.5193 -;-;-;-;-;-;-;-;-;- 538 1 1.242 139075.6 1.0 12071 5001 17060 HBL1_DMSO_200M_050219_2,17074 HBL1_DMSO_200M_050219_2,17074,LCLYWWSTL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17075 90.457 168.0 535730.0 25 0 59174.0 + 17200 KLLDLYRSL 9 92 560.8396598507962 1119.6647667683924 2 560.8401367068291 MULTI CID FTMS 0 0 0 17060 113610.7578125 0.2956541163001551 -2 0.1532363891601562 15 Unmodified _KLLDLYRSL_ REV__ENSG00000138792|ENST00000265162|ENPEP 45.739877483867886 0.0497104363764649 4 K{I|L}{I|L}DVA 6 -1 71.824 0.0 0.0 6.4148 0.0 0.0 0.0 477.2691134088501 477.2691134088501 55.58224159617214 0.0 0.0 0.0 0 1.805462187404089 0.8860566476931632 0.4247425010840047 0.0 K{I|L}{I|L}DVA 6.4148 - 103 + 1 1.242 73045.2 1.0 12072 5001 17060 HBL1_DMSO_200M_050219_2,17075 HBL1_DMSO_200M_050219_2,17075,KLLDLYRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17076 90.471 800.0 80448.0 25 0 26667.0 -1 KMRWKKRLKQQ 11 86 773.4637906838575 1544.913028434515 2 773.4640380740166 MULTI CID FTMS 0 0 0 17060 97374.3359375 1.0 0 0.0 16 Oxidation (M) _KM(Oxidation (M))RWKKRLKQQ_ ENSG00000139865|ENST00000553443|TTC6;ENST00000533625.5_1_14:38165939-38343677:+|nuORF 0.3070304955306653 0.8736993455979228 4 {I|L} 1 -1 10.713 0.0 0.0 0.69346 0.0 0.0 1413.8182541198648 0.0 1413.8182541198648 0.0 7.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.69346 + + 23 + 1 1.242 60187.7 0.5 12073 5001 17060 HBL1_DMSO_200M_050219_2,17076 HBL1_DMSO_200M_050219_2,17076,KMRWKKRLKQQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17078 90.489 800.0 65794.0 25 0 3535.6 -1 EIFNNRNCQSL 11 88 697.8268149467682 1393.6390769603363 2 697.8278686404228 MULTI CID FTMS 0 0 0 17077 60644.015625 0.3151975096159913 3 -0.291534423828125 1 Carbamidomethyl (C) _EIFNNRNC(Carbamidomethyl (C))QSL_ nc|ENSG00000204403|Q6UXS9-4|CASP12;nc|ENSG00000204403|Q6UXS9-5|CASP12;nc|ENSG00000204403|Q6UXS9|CASP12 5.731851221503515 0.8481046878870278 4 {[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}[WQ]{I|L}{I|L}{I|L} 9 -1 25.92 0.0 0.0 1.8599 0.0 0.0 0.0 310.01237547472755 310.01237547472755 13.156024414009376 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}[WQ]{I|L}{I|L}{I|L} 1.8599 - 100 1 1.258 43653.7 0.5600000023841858 12074 5002 17077 HBL1_DMSO_200M_050219_2,17078 HBL1_DMSO_200M_050219_2,17078,EIFNNRNCQSL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 17079 90.491 77.0 780910.0 25 0 90842.0 + 34376 SLTLSLNLT 9 86 481.2818260360833 960.5490991389668 2 481.2823364138603 MULTI CID FTMS 0 0 0 17077 748611.75 0.1806154811408345 -3 0.2479705810546875 2 Unmodified _SLTLSLNLT_ ENST00000513648.5_1_5:102201854-102209236:+|nuORF 42.09456458481378 0.0639583784996157 4 {I|L}SQD 4 7 30.83 0.0 0.0 3.2097 0.0 0.0 349.2206212110354 165.10341821842033 514.3240394294558 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1237125054200234 0.3807196863200844 {I|L}SQD 3.2097 - 622 + 1 1.258 52772.6 1.0 12075 5002 17077 HBL1_DMSO_200M_050219_2,17079 HBL1_DMSO_200M_050219_2,17079,SLTLSLNLT True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17080 90.492 40.0 1321700.0 25 0 183990.0 + 10174 FQAEIAQLM 9 85 525.7676525799324 1049.5207522266646 2 525.7688476443291 MULTI CID FTMS 0 0 0 17077 721526.25 0.4992281791081127 -2 0.1950302124023437 3 Unmodified _FQAEIAQLM_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P 32.78568957990786 0.1150597335874693 4 [AG]A{M(Oxidation (M))|F}E{I|L}AQ{I|L}M 10 3 + 44.012 0.0 0.0 4.1935 4.1935 49.337 0.0 0.0 0.0 1.6946999598069823 5.629778129126272 1.6946999598069823 0.0 0 0.8935078169319297 1.2218487496163564 0.0 0.3807196863200844 [AG]A{M(Oxidation (M))|F}E{I|L}AQ{I|L}M;[AG]{M(Oxidation (M))|F}AE{I|L}AQ{I|L}M;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AE{I|L}AQ{I|L}M;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AEA{I|L}Q{I|L}M;[AG]{M(Oxidation (M))|F}AEA{I|L}Q{I|L}M;[AG]A{M(Oxidation (M))|F}EA{I|L}Q{I|L}M;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAE{I|L}Q{I|L}M;[QA]{M(Oxidation (M))|F}E{I|L}AQ{I|L}M;[AG]{M(Oxidation (M))|F}AAE{I|L}Q{I|L}M;[AG]A{M(Oxidation (M))|F}AE{I|L}Q{I|L}M 4.1935;4.1935;4.0321;3.9943;3.9067;3.9067;3.8266;3.7708;3.7389;3.7389 -;-;+;-;-;-;-;-;-;- + 509 1 1.258 47329.1 1.0 12076 5002 17077 HBL1_DMSO_200M_050219_2,17080 HBL1_DMSO_200M_050219_2,17080,FQAEIAQLM True True FQAEIAQLM 90.491948 525.768847644329 11535297.0 17077.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENSG00000080824|ENST00000216281|HSP90AA1;;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;;nc|ENSG00000205940|Q58FF8|HSP90AB2P 4.597377459208171 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17081 90.497 262.0 394860.0 25 0 47281.0 + 17193 KLLDIRSYL 9 110 374.2290850449602 1119.6654257350806 3 374.2289306521416 MULTI CID FTMS 0 0 0 17077 251768.671875 0.9583241395676084 -1 0.0947341918945312 4 Unmodified _KLLDIRSYL_ ENSG00000103035|ENST00000219313|PSMD7 27.628801355627647 0.1796483985696185 4 SR{I|L}D{I|L}{I|L}R{I|L} 8 5 40.047 0.0 0.0 3.5767 0.0 0.0 135.06868178535314 0.0 135.06868178535314 0.0 18.96086450076673 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 SR{I|L}D{I|L}{I|L}R{I|L} 3.5767 - 416 1 1.258 89554.8 1.0 12077 5002 17077 HBL1_DMSO_200M_050219_2,17081 HBL1_DMSO_200M_050219_2,17081,KLLDIRSYL False True KLLDIRSYL 90.496798 374.228930652142 2234532.75 17077.0 ENSG00000103035|ENST00000219313|PSMD7 -0.4838415582974751 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17082 90.5 175.0 466440.0 25 0 53841.0 + 20420 LLIDQIQSL 9 120 521.8106880908952 1041.6068232485902 2 521.8113891482353 MULTI CID FTMS 0 0 0 17077 193353.96875 0.8721897876019283 1 -0.1016769409179687 5 Unmodified _LLIDQIQSL_ REV__ENSG00000131018|ENST00000367255|SYNE1;REV__ENST00000461872.6_1_6:152697909-152949466:-|nuORF;REV__nc|ENSG00000131018|Q8NF91-10|SYNE1;REV__nc|ENSG00000131018|Q8NF91-4|SYNE1;REV__nc|ENSG00000131018|Q8NF91-7|SYNE1 54.773552608820026 0.0299037012502309 4 {NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{I|L}{I|L}QS{I|L} 9 -1 {NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{I|L}{I|L} + + 30.01 15.717 2.26 2.8811 2.8811 45.669 0.0 0.0 0.0 0.0 19.732582252920405 0.0 0.0 0 0.4247425010840047 0.0 0.6861818737241735 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{I|L}{I|L}QS{I|L} 2.8811 - 366 + 1 1.258 68188.3 1.0 12078 5002 17077 HBL1_DMSO_200M_050219_2,17082 HBL1_DMSO_200M_050219_2,17082,LLIDQIQSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17083 90.504 222.0 280420.0 25 0 44670.0 -1 ALMAAPLSL 9 89 451.75274496202985 901.4909369908596 2 451.7531310915947 MULTI CID FTMS 0 0 0 17077 185617.640625 0.0142921071120113 87 -7.79351806640625 6 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 53.554 0.0 0.0 5.9407 5.9407 75.051 0.0 0.0 0.0 15.44090201101578 3.0102999566398125 3.0102999566398125 1.7609125905568137 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}PASA{I|L}{I|L};[{I|L}A]{M(Oxidation (M))|F}APSA{I|L}{I|L};[{I|L}A][WE]S{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};[{I|L}A][WE]SA{I|L}{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};{[TV]|[{I|L}S]}MPASA{I|L}{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L} 5.9407;5.7453;5.6067;5.4114;4.4778;4.2278;4.1439;4.0325;3.8939;3.8099 -;-;-;-;-;-;-;-;-;- 282 1 1.258 56861.4 1.0 12079 5002 17077 HBL1_DMSO_200M_050219_2,17083 HBL1_DMSO_200M_050219_2,17083,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17084 90.508 204.0 365000.0 25 0 40731.0 + 36593 TAMDVVYAL 9 117 491.7493210136656 981.4840890941311 2 491.7493469119072 MULTI CID FTMS 0 0 0 17077 156012.328125 0.3879117915399953 -2 0.1950302124023437 7 Unmodified _TAMDVVYAL_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 44.40701690623563 0.0526327925666318 4 [DV]CTVV 6 7 29.357 0.0 0.0 2.9911 0.0 0.0 0.0 362.1702212564937 362.1702212564937 10.685145297342316 0.0 0.0 0.0 0 0.0 0.7958800173440752 1.1307196863200843 0.0 [DV]CTVV 2.9911 - 645 1 1.258 58533.3 1.0 12080 5002 17077 HBL1_DMSO_200M_050219_2,17084 HBL1_DMSO_200M_050219_2,17084,TAMDVVYAL True True TAMDVVYAL 90.508275 491.749346911907 2391955.0 17077.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 3.6161835193634033 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17085 90.522 800.0 165250.0 25 0 22496.0 39115 TYESSDRITL 10 171 395.53127373196327 1183.5719917960898 3 395.5316039919853 MULTI CID FTMS 0 0 0 17077 124631.953125 1.0 0 0.0 8 Unmodified _TYESSDRITL_ ENSG00000092295|ENST00000206765|TGM1 10.823927491677226 0.6659270209832991 4 C{M(Oxidation (M))|F}{I|L}GV{I|L} 6 9 19.614 0.0 0.0 1.6572 0.0 0.0 369.1501911142523 179.04645715885002 548.1966482731024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C{M(Oxidation (M))|F}{I|L}GV{I|L} 1.6572 - 524 + 1 1.258 104299.5 0.9200000166893004 12081 5002 17077 HBL1_DMSO_200M_050219_2,17085 HBL1_DMSO_200M_050219_2,17085,TYESSDRITL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17086 90.536 800.0 98455.0 25 0 24579.0 + 7752 ELEQLRKRRR 10 100 692.4185920992139 1382.8226312652278 2 692.4188720583916 MULTI CID FTMS 0 0 0 17077 120593.1796875 1.0 0 0.0 9 Unmodified _ELEQLRKRRR_ REV__ENSG00000090889|ENST00000374403|KIF4A;REV__nc|ENSG00000090889|O95239-2|KIF4A 3.2813086475875832 0.7114585191678878 4 {I|L} 1 -1 10.837 0.0 0.0 0.78372 0.0 0.0 1251.7276280687418 0.0 1251.7276280687418 0.0 0.8374554364688169 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.78372 + + 35 + 1 1.258 68178.3 0.5899999737739563 12082 5002 17077 HBL1_DMSO_200M_050219_2,17086 HBL1_DMSO_200M_050219_2,17086,ELEQLRKRRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17087 90.544 444.0 151470.0 25 0 14693.0 -1 0 96 557.3023135771946 1668.8851113317835 3 557.3039428591728 MULTI CID FTMS 0 0 0 17077 120151.6953125 1.0 0 0.0 10 4 [{I|L}V]Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K 15 -1 + 88.421 0.0 0.0 5.2982 5.2982 69.737 0.0 0.0 0.0 20.949755132308567 0.4542290286760959 0.4542290286760959 0.4542290286760959 0 0.4247425010840047 2.0 0.0 0.2215141619232908 [{I|L}V]Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DNK{I|L};[{I|L}V]Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}YPP{I|L};[{I|L}V]Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}D[KQ]V;[{I|L}V]Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGG{I|L}K;[{I|L}V][AG]{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DN{I|L}K;[{I|L}V]Q{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DGGK{I|L};[{I|L}V][AG]{M(Oxidation (M))|F}SDG{I|L}AH{I|L}DNK{I|L};[{I|L}V]Q{M(Oxidation (M))|F}SD[Q{I|L}]H{I|L}DN{I|L}K;[{I|L}V][AG]{M(Oxidation (M))|F}SDG{I|L}AH{I|L}YPP{I|L} 5.2982;5.271;4.8522;4.7635;4.7571;4.7571;4.7299;4.7299;4.3149;4.311 -;-;-;-;-;-;-;-;-;- 1585 + 1 1.258 54969.8 1.0 12083 5002 17077 HBL1_DMSO_200M_050219_2,17087 HBL1_DMSO_200M_050219_2,17087, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17088 90.558 800.0 298790.0 25 0 41448.0 + -1 ALPEAIAAL 9 144 868.073483539444 2601.198621218532 3 868.7432128787041 MULTI CID FTMS 0 0 0 17077 104040.203125 0.2221853576499363 -2 0.1950302124023437 11 nc|ENSG00000185347|Q86SX3-6|TEDC1;ENSG00000185347|ENST00000392523|TEDC1;ENST00000546536.5_1_14:105957646-105963882:+|nuORF;ENST00000460959.5_1_14:105957646-105957931:+|nuORF;nc|ENSG00000185347|Q86SX3-2|TEDC1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 58.867 0.0 0.0 2.2631 0.0 0.0 0.0 1560.5840377841964 1560.5840377841964 15.45702350114933 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.2631 - 3395 1 1.258 166435.3 0.550000011920929 12084 5002 17077 HBL1_DMSO_200M_050219_2,17088 HBL1_DMSO_200M_050219_2,17088, False False ALPEAIAAL 90.557673 868.0752 6317636.0 17077.0 nc|ENSG00000185347|Q86SX3-6|TEDC1;;ENSG00000185347|ENST00000392523|TEDC1;;ENST00000546536.5_1_14:105957646-105963882:+|nuORF;;ENST00000460959.5_1_14:105957646-105957931:+|nuORF;;nc|ENSG00000185347|Q86SX3-2|TEDC1 -0.3323885003725688 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17089 90.573 800.0 203690.0 25 0 18027.0 -1 0 137 1052.51794502405 3154.5320056723504 3 1052.858447253704 MULTI CID FTMS 0 0 0 17077 80418.359375 0.1535179793609364 -4 0.41192626953125 12 4 {I|L}AGA{I|L}EA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 -1 43.316 0.0 0.0 1.3731 0.0 0.0 2254.059375606154 0.0 2254.059375606154 0.0 7.117873643540435 0.0 0.0 0 0.5 0.0 0.6237125054200234 0.5501648626366046 {I|L}AGA{I|L}EA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 1.3731 - 14904 + 1 1.258 104478.1 0.5299999713897705 12085 5002 17077 HBL1_DMSO_200M_050219_2,17089 HBL1_DMSO_200M_050219_2,17089, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17091 90.578 23.0 2157100.0 25 0 130260.0 + 4189 DAPIVAHLW 9 92 511.2767915749069 1020.5390302166136 2 511.2773315310478 MULTI CID FTMS 0 0 0 17090 1318443.125 0.2501655746314903 3 -0.30633544921875 1 Unmodified _DAPIVAHLW_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 49.66892048692302 0.0410958345688192 4 {[DA]|[EG]}P{I|L}VAH{I|L}W 9 0 + 55.65 0.0 0.0 5.453 5.453 79.829 0.0 0.0 0.0 14.59491766415944 6.197887582883936 6.197887582883936 6.197887582883936 0 0.5629529932484498 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}P{I|L}VAH{I|L}W;{[DA]|[EG]}P{I|L}VAW[H{I|L}];WP{I|L}EQV[H{I|L}];[{I|L}P]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AV{I|L}[HQ];[{I|L}P][WE]V{I|L}[HQ];WP{I|L}[R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}];{[DA]|[EG]}PVV[RD][H{I|L}] 5.453;4.8457;3.9641;3.3296;3.2847;2.803;2.1784 +;-;-;-;-;-;- + 299 + 1 1.268 47009.5 1.0 12086 5003 17090 HBL1_DMSO_200M_050219_2,17091 HBL1_DMSO_200M_050219_2,17091,DAPIVAHLW True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17092 90.579 40.0 1283300.0 25 0 134910.0 + 2414 AQQELKLLL 9 84 528.3259374210294 1054.637321908859 2 528.3270141482353 MULTI CID FTMS 0 0 0 17090 1199405.875 0.6982338086513126 1 -0.0702133178710937 2 Unmodified _AQQELKLLL_ ENSG00000119041|ENST00000263956|GTF3C3 76.82478488871298 0.0184607444814265 4 [QA]QE{I|L}K{I|L}{I|L}{I|L} 9 0 + 56.838 0.0 0.0 5.3893 5.3893 83.126 0.0 0.0 0.0 7.513487579716767 7.513487579716767 7.513487579716767 9.208187539523747 0 2.278659694992122 0.0 0.3494850021680094 0.8494850021680094 + + [QA]QE{I|L}K{I|L}{I|L}{I|L};[QA][AG]E{I|L}K{I|L}{I|L}{I|L};[QA]Q[RK]{I|L}{I|L}[QA];{I|L}{I|L}KEQ{I|L}{I|L}[QA];{I|L}{I|L}KEQ[QA]{I|L}{I|L};{I|L}{I|L}[VG]TQ{I|L}{I|L}[QA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}K{I|L}{I|L}{I|L}[QA];[K{I|L}]{I|L}EQ{I|L}{I|L}[QA];[QA]Q[RK][QA]{I|L}{I|L};{I|L}{I|L}[VG]TQ[QA]{I|L}{I|L} 5.3893;4.5162;3.658;3.639;3.3331;3.1698;3.1393;3.0514;3.0207;2.8639 +;-;-;-;-;-;-;-;-;- + 355 1 1.268 47542.1 1.0 12087 5003 17090 HBL1_DMSO_200M_050219_2,17092 HBL1_DMSO_200M_050219_2,17092,AQQELKLLL True True AQQELKLLL 90.578947 528.327014148235 15518276.0 17090.0 ENSG00000119041|ENST00000263956|GTF3C3 4.897515773773193 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17093 90.58 49.0 965420.0 25 0 150030.0 + 26530 NVIDNLIVA 9 77 485.7819795896355 969.549406246071 2 485.7822143435478 MULTI CID FTMS 0 0 0 17090 983202.0625 0.0117839273141753 7 -0.7630844116210938 3 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 36.12702656103203 0.0967173616627612 4 [{I|L}V]NDN{I|L} 6 5 31.107 0.0 0.0 3.2084 0.0 0.0 0.0 298.1758831765679 298.1758831765679 18.80001899740286 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.7742275032520141 [{I|L}V]NDN{I|L} 3.2084 - 236 1 1.268 42189.1 1.0 12088 5003 17090 HBL1_DMSO_200M_050219_2,17093 HBL1_DMSO_200M_050219_2,17093,NVIDNLIVA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17094 90.582 58.0 1032000.0 25 0 66113.0 + 18282 KVIGFLEEV 9 93 517.2994023566243 1032.5842517800486 2 517.2999755740166 MULTI CID FTMS 0 0 0 17090 570474.5625 0.8349864875817665 1 -0.0702133178710937 4 Unmodified _KVIGFLEEV_ ENSG00000058335|ENST00000558480|RASGRF1;ENST00000560334.5_1_15:79271198-79356973:-|nuORF;nc|ENSG00000058335|Q13972-2|RASGRF1;nc|ENSG00000058335|Q13972|RASGRF1 22.736283301280096 0.2418982879461534 4 {I|L}EEV 4 5 36.983 0.0 0.0 3.5816 0.0 0.0 544.3371731928482 0.0 544.3371731928482 0.0 20.854154999221457 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {I|L}EEV 3.5816 + + 97 1 1.268 52706.2 1.0 12089 5003 17090 HBL1_DMSO_200M_050219_2,17094 HBL1_DMSO_200M_050219_2,17094,KVIGFLEEV False True KVIGFLEEV 90.581714 517.299975574017 6085122.0 17090.0 ENST00000560334.5_1_15:79271198-79356973:-|nuORF;;nc|ENSG00000058335|Q13972|RASGRF1;;ENSG00000058335|ENST00000558480|RASGRF1;;nc|ENSG00000058335|Q13972-2|RASGRF1 4.3682169914245605 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17095 90.584 98.0 666270.0 25 0 49978.0 + 35442 STLHLVLRL 9 75 351.2257507279637 1050.6554227840911 3 351.2256347537041 MULTI CID FTMS 0 0 0 17090 503926.78125 0.0248727029139939 7 -0.7630844116210938 5 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 30.63653989081413 0.1413794767160703 4 H{I|L}V{I|L}[R{I|L}] 6 3 32.154 0.0 0.0 3.0603 0.0 0.0 301.16414017033384 0.0 301.16414017033384 0.0 6.431715384352081 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.3252574989159953 + H{I|L}V{I|L}[R{I|L}] 3.0603 + + 113 + 1 1.268 58198.8 1.0 12090 5003 17090 HBL1_DMSO_200M_050219_2,17095 HBL1_DMSO_200M_050219_2,17095,STLHLVLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17096 90.586 85.0 507650.0 25 0 64660.0 22335 LPSLPYLSVL 10 61 551.329819081283 1100.6450852293658 2 551.3298828005791 MULTI CID FTMS 0 0 0 17090 444352.65625 0.4395330934676719 -2 0.1964111328125 6 Unmodified _LPSLPYLSVL_ ENSG00000179532|ENST00000254579|DNHD1 26.88365393820708 0.3646707531412818 4 [VS]EV[KQ]{I|L}SV{I|L} 10 6 + 54.302 0.0 0.0 4.9336 4.9336 84.874 0.0 0.0 0.0 16.46591250700361 26.51023442440469 16.46591250700361 21.140751949142675 0 0.7429928190999391 1.3979400086720375 0.9247425010840048 0.0 [VS]EV[KQ]{I|L}SV{I|L};{[TV]|[{I|L}S]}DV[KQ]{I|L}SV{I|L};[TA]{[QN]|[E{I|L}]|[KN]}[KQ]{I|L}SV{I|L} 4.9336;3.0129;2.0264 -;-;- 76 1 1.268 43563.0 1.0 12091 5003 17090 HBL1_DMSO_200M_050219_2,17096 HBL1_DMSO_200M_050219_2,17096,LPSLPYLSVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17097 90.588 113.0 761810.0 25 0 79309.0 + 33886 SLFPGKLEVV 10 104 544.8210487343874 1087.6275445355748 2 544.8212158083916 MULTI CID FTMS 0 0 0 17090 444419.8125 0.9992200967164384 1 -0.0702133178710937 7 Unmodified _SLFPGKLEVV_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 20.41453444215458 0.5050059513928961 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}P 4 6 38.544 0.0 0.0 3.5439 0.0 0.0 0.0 640.3680513971311 640.3680513971311 15.26892951584678 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}P 3.5439 + + 225 + 1 1.268 70176.9 1.0 12092 5003 17090 HBL1_DMSO_200M_050219_2,17097 HBL1_DMSO_200M_050219_2,17097,SLFPGKLEVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17098 90.59 83.0 574940.0 25 0 45053.0 + 33323 FTDDQWLNV 9 94 569.2694739253668 1136.5243949175335 2 569.2673217654228 MULTI CID FTMS 0 0 0 17090 414953.625 0.7248649815384424 2 -0.1898574829101562 8 Unmodified _SFVWHALDY_ nc|ENSG00000242802|O43299-3|AP5Z1;ENSG00000242802|ENST00000649063|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1 20.453626601364224 0.2830276176381075 4 [WH]VAEVAYY 9 7 + 26.321 0.0 0.0 2.3159 2.3159 62.548 0.0 0.0 0.0 1.2493873660830026 1.2493873660830026 1.2493873660830026 1.2493873660830026 0 0.0 0.0 0.0 0.0 [WH]VAEVAYY;{[QC]|[C(Carbamidomethyl (C))A]}{I|L}AVEA[Q{I|L}]Y;[WH]AVEVAYY;[MN]VAVEA[Q{I|L}]Y;{[QC]|[C(Carbamidomethyl (C))A]}{I|L}AVE[YV]NV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L}AYY;{[QC]|[C(Carbamidomethyl (C))A]}{I|L}AVEA[YQ]{I|L};{[QC]|[C(Carbamidomethyl (C))A]}{I|L}AVEA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[MN]VAVE[YV]NV;[MN]VAVEA[YQ]{I|L} 2.3159;2.206;2.0511;2.0511;1.7851;1.6795;1.6763;1.6763;1.6302;1.5213 -;-;-;-;-;-;-;-;-;- 597 1 1.268 42427.7 1.0 12093 5003 17090 HBL1_DMSO_200M_050219_2,17098 HBL1_DMSO_200M_050219_2,17098,SFVWHALDY False True FTDDQWLNV 90.589999 569.267321765423 3653781.0 17090.0 nc|ENSG00000242802|O43299-3|AP5Z1;;ENSG00000242802|ENST00000649063|AP5Z1;;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;;nc|ENSG00000242802|O43299-2|AP5Z1 7.1877725919087725 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17099 90.591 55.0 564770.0 25 0 108670.0 + -1 LTQMGTVPVL 10 62 537.7959786908501 1073.5774044485 2 537.7954589724541 MULTI CID FTMS 0 0 0 17090 379518.71875 0.0809814075752183 4 -0.4051742553710937 9 Oxidation (M) _LTQM(Oxidation (M))GTVPVL_ REV__ENST00000343242.8_1_7:1580010-1580304:+|nuORF 24.020572477871973 0.4289996903560794 4 [{I|L}T]PAAWCT[{I|L}V] 10 -1 + 30.18 0.0 0.0 2.8112 2.8112 76.693 0.0 0.0 0.0 3.49239948601209 18.397184962452027 3.49239948601209 12.552725051033056 0 0.3807196863200844 1.0457574905606752 0.5 0.0 [{I|L}T]PAAWCT[{I|L}V];[DP][K{I|L}]WCT[{I|L}V];[{I|L}T][WD]{[QV]|[N{I|L}]|[RA]|[KV]}T[{I|L}V] 2.8112;1.6419;0.6628 -;-;- 102 1 1.268 34491.8 1.0 12094 5003 17090 HBL1_DMSO_200M_050219_2,17099 HBL1_DMSO_200M_050219_2,17099,LTQMGTVPVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17100 90.594 135.0 519990.0 25 0 65226.0 + 18229 KVFSAFITV 9 92 506.29836424498217 1010.5821755567644 2 506.2982971072197 MULTI CID FTMS 0 0 0 17090 379325.6875 0.565481064263771 -2 0.1964111328125 10 Unmodified _KVFSAFITV_ ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188 22.736283301280096 0.2418982879461534 4 [{M(Oxidation (M))|F}V]{I|L}{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L} 8 7 + 29.666 0.0 0.0 2.9355 2.9355 76.058 0.0 0.0 0.0 -0.7841822988147129 0.0 -0.7841822988147129 10.039237471316294 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]{I|L}{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L};[Q{I|L}][YK]{M(Oxidation (M))|F}{I|L}TV;YYV{I|L}{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[TV]|[{I|L}S]}[HS][RV]{I|L}TV;YY{I|L}V{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 2.9355;1.9421;1.6481;1.4568;1.0524 -;-;-;-;- 286 + 1 1.268 58650.5 1.0 12095 5003 17090 HBL1_DMSO_200M_050219_2,17100 HBL1_DMSO_200M_050219_2,17100,KVFSAFITV False True KVFSAFITV 90.594147 506.29829710722 5164279.5 17090.0 ENST00000477069.5_1_9:131747266-131765892:+|nuORF;;ENSG00000095319|ENST00000372577|NUP188;;nc|ENSG00000095319|Q5SRE5-2|NUP188 3.949357509613037 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17101 90.597 127.0 360330.0 25 0 21616.0 + 44345 YLQDVIMQV 9 91 554.7901170684011 1107.565681203602 2 554.7897216677666 MULTI CID FTMS 0 0 0 17090 376234.375 0.8132002745542984 -1 0.1016769409179687 11 Unmodified _YLQDVIMQV_ ENSG00000198546|ENST00000361518|ZNF511;ENST00000482153.1_1_10:135122453-135123793:+|nuORF;nc|ENSG00000198546|Q8NB15-1|ZNF511 41.8396318013385 0.0653578398400075 4 [Y{I|L}]QDV{I|L} 6 3 27.357 0.0 0.0 2.47 0.0 0.0 0.0 373.16001649096455 373.16001649096455 8.672137691284405 0.0 0.0 0.0 0 0.2742275032520141 1.3979400086720375 0.0 0.0 + [Y{I|L}]QDV{I|L} 2.47 + + 461 1 1.268 40862.0 1.0 12096 5003 17090 HBL1_DMSO_200M_050219_2,17101 HBL1_DMSO_200M_050219_2,17101,YLQDVIMQV True True YLQDVIMQV 90.596756 554.789721667767 4548760.0 17090.0 ENSG00000198546|ENST00000361518|ZNF511;;ENST00000482153.1_1_10:135122453-135123793:+|nuORF;;nc|ENSG00000198546|Q8NB15-1|ZNF511 7.252920150756836 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17102 90.599 118.0 573230.0 25 0 51415.0 + 32030 RVIGPFYEI 9 85 547.3052269867366 1092.595901040273 2 547.3057739138603 MULTI CID FTMS 0 0 0 17090 361566.84375 0.5270038637072332 2 -0.1898574829101562 12 Unmodified _RVIGPFYEI_ ENSG00000107897|ENST00000396271|ACBD5;ENST00000476758.1_1_10:27509331-27520733:-|nuORF;nc|ENSG00000107897|Q5T8D3-2|ACBD5;nc|ENSG00000107897|Q5T8D3-4|ACBD5;nc|ENSG00000107897|Q5T8D3|ACBD5 18.1463463914782 0.3454829746528889 4 G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YE{I|L} 6 3 32.664 0.0 0.0 2.9896 0.0 0.0 368.2540760724625 0.0 368.2540760724625 0.0 8.507112333562858 0.0 0.0 0 0.5752574989159953 0.0 0.0 0.0 + G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YE{I|L} 2.9896 + + 107 1 1.268 57425.4 1.0 12097 5003 17090 HBL1_DMSO_200M_050219_2,17102 HBL1_DMSO_200M_050219_2,17102,RVIGPFYEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17103 90.605 313.0 315980.0 25 0 24589.0 -1 DLMDQTGEMRM 11 100 671.7750160124011 1341.5354790916022 2 671.7762939333916 MULTI CID FTMS 0 0 0 17090 329315.5 0.5855208860364931 4 -0.4051742553710937 13 Oxidation (M) _DLMDQTGEM(Oxidation (M))RM_ ENSG00000149124|ENST00000344743|GLYAT 11.494710602746466 0.7960433852372589 4 [EP]GDWSETV 9 -1 64.72 0.0 0.0 4.8243 0.0 0.0 0.0 338.0823843395429 338.0823843395429 38.773043837969325 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.566901560044258 0.0 [EP]GDWSETV 4.8243 - 1566 1 1.268 75808.9 1.0 12098 5003 17090 HBL1_DMSO_200M_050219_2,17103 HBL1_DMSO_200M_050219_2,17103,DLMDQTGEMRM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17104 90.608 164.0 319350.0 25 0 62605.0 28867 QAKQLLRSRRQ 11 70 461.9488409019351 1382.8246933060052 3 461.9484741091728 MULTI CID FTMS 0 0 0 17090 303129.0 0.6017077356758851 2 -0.1898574829101562 14 Unmodified _QAKQLLRSRRQ_ ENSG00000214226|ENST00000397861|C17orf67 1.3295316138638542 0.8688751186870782 4 [QA]{I|L} 3 8 11.127 0.0 0.0 0.80463 0.0 0.0 0.0 1067.621970487899 1067.621970487899 0.5306584674532839 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 [QA]{I|L} 0.80463 - 22 1 1.268 51720.3 1.0 12099 5003 17090 HBL1_DMSO_200M_050219_2,17104 HBL1_DMSO_200M_050219_2,17104,QAKQLLRSRRQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17105 90.613 239.0 310810.0 25 0 59329.0 + 41542 VPPAALISI 9 84 440.7786861799498 879.5428194266996 2 440.7789794802666 MULTI CID FTMS 0 0 0 17090 243157.78125 0.7893314827459473 1 -0.0702133178710937 15 Unmodified _VPPAALISI_ ENSG00000101849|ENST00000645353|TBL1X;ENSG00000177565|ENST00000457928|TBL1XR1;nc|ENSG00000101849|O60907-2|TBL1X;TBL1XR1-TP73|1|fusion;TBL1XR1-TP73|2|fusion;TBL1XR1-TP73|3|fusion;TBL1XR1-TP73|4|fusion;TBL1XR1-TP73|5|fusion;TBL1XR1-TP73|6|fusion 34.18733598223924 0.1073653526364521 4 [VP][VG]PV{I|L}S{I|L} 9 4 + 36.845 0.0 0.0 4.1891 4.1891 70.281 0.0 0.0 0.0 1.7508318932272786 15.964015683995784 1.7508318932272786 3.0102999566398125 0 0.8182503180159344 1.154901959985743 0.0 0.0 [VP][VG]PV{I|L}S{I|L};[VP][VG]P{I|L}VS{I|L} 4.1891;3.8468 -;- 221 1 1.268 65515.8 1.0 12100 5003 17090 HBL1_DMSO_200M_050219_2,17105 HBL1_DMSO_200M_050219_2,17105,VPPAALISI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17106 90.621 458.0 408410.0 25 0 19315.0 -1 0 127 943.475313160726 1884.936073388252 2 943.9749633669852 MULTI CID FTMS 0 0 0 17090 222574.75 0.7858626652033052 10 -1.07574462890625 16 4 [NP]D{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}CC{I|L}DNP 13 -1 49.967 0.0 0.0 2.6509 0.0 0.0 0.0 424.2484567791702 424.2484567791702 15.041301590350642 0.0 0.0 0.0 0 0.0 0.958607314841775 0.9119543704721594 1.079689690656103 [NP]D{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}CC{I|L}DNP 2.6509 - 6188 1 1.268 122653.4 1.0 12101 5003 17090 HBL1_DMSO_200M_050219_2,17106 HBL1_DMSO_200M_050219_2,17106, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17107 90.628 380.0 340070.0 25 0 24009.0 -1 0 128 651.3066904296896 2601.1976558523584 4 651.5583373904228 MULTI CID FTMS 0 0 0 17090 195120.71875 0.5403875418378963 -1 0.1016769409179687 17 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 62.229 0.0 0.0 2.3923 0.0 0.0 0.0 1560.5765370381584 1560.5765370381584 16.909360233596153 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.2614393726401688 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.3923 - 9918 1 1.268 100078.4 1.0 12102 5003 17090 HBL1_DMSO_200M_050219_2,17107 HBL1_DMSO_200M_050219_2,17107, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17108 90.631 166.0 364250.0 25 0 38115.0 + -1 FISPFGHGL 9 90 488.2845071857869 974.554461438374 2 488.2850829958916 MULTI CID FTMS 0 0 0 17090 195707.484375 0.2529306180626362 2 -0.1898574829101562 18 Oxidation (M) _SLM(Oxidation (M))RLLGAV_ nc|ENSG00000108387|O43236-2|SEPTIN4;ENSG00000108387|ENST00000672673|SEPTIN4;ENST00000577440.5_1_17:56598198-56609324:-|nuORF;nc|ENSG00000168385|Q15019-3|SEPTIN2;ENST00000584488.5_1_17:56598198-56606616:-|nuORF;nc|ENSG00000108387|O43236-3|SEPTIN4;nc|ENSG00000168385|Q15019-2|SEPTIN2;ENSG00000184702|ENST00000455784|SEPTIN5;ENSG00000168385|ENST00000391971|SEPTIN2;nc|ENSG00000108387|O43236-4|SEPTIN4;nc|ENSG00000108387|O43236-5|SEPTIN4;nc|ENSG00000284874|Q99719-2|SEPTIN5;nc|ENSG00000108387|O43236|SEPTIN4 21.74664581756881 0.2544899275067181 4 SP{M(Oxidation (M))|F}G[HA]V 7 -1 21.132 0.0 0.0 2.1684 0.0 0.0 261.2055977682552 0.0 261.2055977682552 0.0 10.02275188015922 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 SP{M(Oxidation (M))|F}G[HA]V 2.1684 - 118 + 1 1.268 52846.8 1.0 12103 5003 17090 HBL1_DMSO_200M_050219_2,17108 HBL1_DMSO_200M_050219_2,17108,SLMRLLGAV False False FISPFGHGL 90.630843 488.285082995892 2641911.75 17090.0 nc|ENSG00000108387|O43236-2|SEPTIN4;;ENSG00000108387|ENST00000672673|SEPTIN4;;ENST00000577440.5_1_17:56598198-56609324:-|nuORF;;nc|ENSG00000168385|Q15019-3|SEPTIN2;;ENST00000584488.5_1_17:56598198-56606616:-|nuORF;;nc|ENSG00000108387|O43236-3|SEPTIN4;;nc|ENSG00000168385|Q15019-2|SEPTIN2;;ENSG00000184702|ENST00000455784|SEPTIN5;;ENSG00000168385|ENST00000391971|SEPTIN2;;nc|ENSG00000108387|O43236-4|SEPTIN4;;nc|ENSG00000108387|O43236-5|SEPTIN4;;nc|ENSG00000284874|Q99719-2|SEPTIN5;;nc|ENSG00000108387|O43236|SEPTIN4 3.668289502461752 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17109 90.634 139.0 248600.0 25 0 23369.0 + 33591 SIPDFPMHLA 10 64 564.2807342562144 1126.5469155792289 2 564.2808105349541 MULTI CID FTMS 0 0 0 17090 179120.90625 0.2369146118235658 4 -0.4051742553710937 19 Unmodified _SIPDFPMHLA_ ENSG00000148840|ENST00000278070|PPRC1;nc|ENSG00000148840|Q5VV67-2|PPRC1 26.88365393820708 0.3646707531412818 4 {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}HA{I|L} 10 2 + 52.538 0.0 0.0 4.6636 4.6636 85.376 0.0 0.0 0.0 27.72679810508432 8.409683325186187 8.409683325186187 52.537788614300815 0 0.3494850021680094 2.0 0.0 0.3807196863200844 {[TV]|[{I|L}S]}PD{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}HA{I|L} 4.6636 - 106 + 1 1.268 34676.7 1.0 12104 5003 17090 HBL1_DMSO_200M_050219_2,17109 HBL1_DMSO_200M_050219_2,17109,SIPDFPMHLA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17110 90.643 471.0 225570.0 25 0 25351.0 -1 0 138 577.3216910153669 576.3144145487669 1 577.3228027224541 MULTI CID FTMS 0 0 0 17090 134420.65625 0.9289152572825976 -1 0.1016769409179687 20 4 RG 2 -1 13.188 0.0 0.0 2.2883 0.0 0.0 345.2015858380875 0.0 345.2015858380875 0.0 2.808984056553534 0.0 0.0 0 0.0 0.0 0.0 0.0 RG 2.2883 - 64 1 1.268 84369.0 1.0 12105 5003 17090 HBL1_DMSO_200M_050219_2,17110 HBL1_DMSO_200M_050219_2,17110, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17112 90.648 20.0 2367900.0 25 0 222650.0 + 35419 STIRLLTSL 9 68 502.3111674916098 1002.6077820500196 2 502.3113891482353 MULTI CID FTMS 0 0 0 17111 2354048.0 0.3158504589935443 3 -0.3349609375 1 Unmodified _STIRLLTSL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 65.47368725323818 0.0230515101691092 4 {[MG]|[TS]}{I|L}R{I|L}{I|L}TS{I|L} 9 0 + 68.835 0.0 0.0 6.8656 6.8656 94.515 0.0 0.0 0.0 4.232712163289278 47.91833743429045 4.232712163289278 68.83471251333795 0 1.960409376976188 0.0 1.035666875892183 0.0 + + {[MG]|[TS]}{I|L}R{I|L}{I|L}TS{I|L} 6.8656 + + 75 1 1.281 46894.1 1.0 12106 5004 17111 HBL1_DMSO_200M_050219_2,17112 HBL1_DMSO_200M_050219_2,17112,STIRLLTSL True True STIRLLTSL 90.647978 502.311389148235 186339264.0 17111.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 5.322103023529053 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17113 90.652 236.0 299310.0 25 0 62704.0 + + -1 IPMHGPLLI 9 111 495.2901401460561 988.565727358912 2 495.7942382693291 MULTI CID FTMS 0 0 0 17111 166390.828125 0.1651754260462948 5 -0.5592498779296875 2 Oxidation (M) _LNIM(Oxidation (M))SGLLL_ ENST00000398258.7_1_3:107774387-107777202:-|nuORF;nc|ENSG00000196776|Q08722-4|CD47;nc|ENSG00000196776|Q08722-3|CD47;ENSG00000196776|ENST00000361309|CD47;nc|ENSG00000196776|Q08722-2|CD47 18.13498045792455 0.3457906370836843 4 {I|L}{I|L}PMC(Carbamidomethyl (C)){I|L}{I|L} 7 -1 36.675 0.0 0.0 3.7099 0.0 0.0 130.09210782941835 0.0 130.09210782941835 0.0 24.825162866063685 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}PMC(Carbamidomethyl (C)){I|L}{I|L} 3.7099 - 361 + 1 1.281 58811.3 1.0 12107 5004 17111 HBL1_DMSO_200M_050219_2,17113 HBL1_DMSO_200M_050219_2,17113,LNIMSGLLL False False IPMHGPLLI 90.652397 495.794238269329 24838252.0 17111.0 ENST00000398258.7_1_3:107774387-107777202:-|nuORF;;nc|ENSG00000196776|Q08722-4|CD47;;nc|ENSG00000196776|Q08722-3|CD47;;ENSG00000196776|ENST00000361309|CD47;;nc|ENSG00000196776|Q08722-2|CD47 2.328715414429704 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17114 90.654 26.0 2187800.0 25 0 169890.0 + 22307 LPSELIVHI 9 87 510.80784414258346 1019.601135351967 2 510.8084289431572 MULTI CID FTMS 0 0 0 17111 1394719.625 0.7082050432177608 -1 0.0702133178710937 3 Unmodified _LPSELIVHI_ ENSG00000165355|ENST00000298097|FBXO33 57.47134341890925 0.0274820932774257 4 {I|L}PSE{I|L}{I|L}VH{I|L} 9 0 + 90.87 0.0 0.0 8.9123 8.9123 98.572 0.0 0.0 0.0 68.47373228030179 10.74753464049519 10.74753464049519 58.4176003468815 0 1.674742501084005 2.0 0.0 0.0 + + {I|L}PSE{I|L}{I|L}VH{I|L};{I|L}P[KG][R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}];{I|L}[Y{I|L}]{I|L}{[TV]|[{I|L}S]}{I|L}W;{I|L}[Y{I|L}]{I|L}{[TV]|[{I|L}S]}W{I|L};[KG]P{I|L}[R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}] 8.9123;3.1828;1.043;0.89972;0.041484 +;-;-;-;- + 548 + 1 1.281 52684.3 1.0 12108 5004 17111 HBL1_DMSO_200M_050219_2,17114 HBL1_DMSO_200M_050219_2,17114,LPSELIVHI True True LPSELIVHI 90.653574 510.808428943157 35916840.0 17111.0 ENSG00000165355|ENST00000298097|FBXO33 4.067773739496867 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17115 90.655 72.0 809670.0 25 0 92034.0 + 44977 YPRLSIPNL 9 85 536.81079257504 1071.6070322168798 2 536.8112060427666 MULTI CID FTMS 0 0 0 17111 568001.25 0.4724668078241329 -5 0.41986083984375 4 Unmodified _YPRLSIPNL_ ENSG00000242265|ENST00000612748|PEG10;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 34.40172386719151 0.1061884637610825 4 GS{I|L}NP{I|L} 6 6 38.078 0.0 0.0 3.5534 0.0 0.0 472.26817519355626 0.0 472.26817519355626 0.0 20.173428491353526 0.0 0.0 0 1.1435078169319297 0.0 0.4247425010840047 0.0 GS{I|L}NP{I|L} 3.5534 - 164 1 1.281 54885.7 1.0 12109 5004 17111 HBL1_DMSO_200M_050219_2,17115 HBL1_DMSO_200M_050219_2,17115,YPRLSIPNL True True YPRLSIPNL 90.655274 536.811206042767 51804396.0 17111.0 nc|ENSG00000242265|Q86TG7|PEG10;;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;;nc|ENSG00000242265|Q86TG7-4|PEG10;;ENSG00000242265|ENST00000612748|PEG10 3.8853278160095215 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17116 90.658 147.0 542720.0 25 0 48849.0 + 22623 LPYLVPKL 8 84 471.80487791902186 941.5952029048436 2 471.8051940798759 MULTI CID FTMS 0 0 0 17111 307086.03125 0.2242156476200646 -3 0.2666244506835937 5 Unmodified _LPYLVPKL_ ENSG00000089154|ENST00000300648|GCN1 53.57557251787612 0.1224291679108181 4 {I|L}PY{I|L}VPK{I|L} 8 0 + 74.079 0.0 0.0 7.8674 7.8674 94.262 0.0 0.0 0.0 51.57049445719053 13.214562785677655 13.214562785677655 14.191293077419758 0 1.0994850021680094 1.5228787452803376 0.0 0.0 + + {I|L}PY{I|L}VPK{I|L};{I|L}PY{I|L}V{I|L}[KP];{I|L}{I|L}{M(Oxidation (M))|F}{I|L}VPK{I|L};{I|L}PY{I|L}[K{I|L}]PV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}V{I|L}[KP];{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[K{I|L}]PV;{I|L}{I|L}[KT]{I|L}QQV;{I|L}{I|L}{[SA]|[TG]}{I|L}{[QG]|[NA]}K{I|L} 7.8674;6.3603;6.2244;4.9112;4.7172;3.2682;2.2631;1.9204 +;-;-;-;-;-;-;- + 197 + 1 1.281 68500.7 1.0 12110 5004 17111 HBL1_DMSO_200M_050219_2,17116 HBL1_DMSO_200M_050219_2,17116,LPYLVPKL True True LPYLVPKL 90.658201 471.805194079876 31252778.0 17111.0 ENSG00000089154|ENST00000300648|GCN1 5.6525163650512695 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17117 90.661 156.0 403030.0 25 0 58019.0 + 32044 RVLDFDPMAV 10 68 581.7991435451961 1161.583734157192 2 581.7986328005791 MULTI CID FTMS 0 0 0 17111 288617.15625 0.5998137383549941 -1 0.0702133178710937 6 Unmodified _RVLDFDPMAV_ ENSG00000140451|ENST00000559239|PIF1;nc|ENSG00000140451|Q9H611-3|PIF1;nc|ENSG00000140451|Q9H611-4|PIF1 25.997395711884035 0.38458358153512 4 {M(Oxidation (M))|F}DPMAV 6 4 45.846 0.0 0.0 3.9469 0.0 0.0 483.2817860334 0.0 483.2817860334 0.0 30.361753205006607 0.0 0.0 0 1.3182503180159344 0.0 0.4247425010840047 0.0 + {M(Oxidation (M))|F}DPMAV 3.9469 + + 74 1 1.281 58805.2 1.0 12111 5004 17111 HBL1_DMSO_200M_050219_2,17117 HBL1_DMSO_200M_050219_2,17117,RVLDFDPMAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17118 90.675 800.0 105420.0 25 0 7108.1 -1 0 100 1058.5111172786242 3172.5115224360725 3 1059.180224597454 MULTI CID FTMS 0 0 0 17111 179185.390625 1.0 0 0.0 7 4 [MN]P{[QN]|[E{I|L}]|[KN]}{I|L}NDN[RP]GD 13 -1 33.683 0.0 0.0 1.0617 0.0 0.0 0.0 1703.8089827234355 1703.8089827234355 10.227338595787892 0.0 0.0 0.0 0 0.0 2.0 0.0 0.6307196863200843 [MN]P{[QN]|[E{I|L}]|[KN]}{I|L}NDN[RP]GD 1.0617 - 4201 1 1.281 60220.2 0.7400000095367432 12112 5004 17111 HBL1_DMSO_200M_050219_2,17118 HBL1_DMSO_200M_050219_2,17118, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17119 90.679 210.0 374830.0 25 0 34826.0 + 41138 VPAFVRMI 8 93 466.7742820992135 931.5340112652268 2 466.7733642458916 MULTI CID FTMS 0 0 0 17111 179279.3125 0.63293136553577 -1 0.0702133178710937 8 Unmodified _VPAFVRMI_ ENSG00000180957|ENST00000335272|PITPNB;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;nc|ENSG00000180957|P48739-2|PITPNB;nc|ENSG00000180957|P48739-3|PITPNB 30.22481116460888 0.4082965392918993 4 VPA{M(Oxidation (M))|F}V[{I|L}T]SV 9 4 + 55.129 0.0 0.0 5.9181 5.9181 79.843 0.0 0.0 0.0 29.187069798145444 1.3034258797900833 1.3034258797900833 4.559319556497243 0 0.6747425010840047 1.3010299956639813 0.0 0.0 VPA{M(Oxidation (M))|F}V[{I|L}T]SV;VPA{M(Oxidation (M))|F}V{[WT]|[RM]}{I|L};VP{I|L}R[WY]V 5.9181;5.4287;4.4826 -;+;- + 236 + 1 1.281 66942.8 1.0 12113 5004 17111 HBL1_DMSO_200M_050219_2,17119 HBL1_DMSO_200M_050219_2,17119,VPAFVRMI False True VPAFVRMI 90.679147 466.773364245892 3968672.5 17111.0 ENSG00000180957|ENST00000335272|PITPNB;;nc|ENSG00000180957|P48739-2|PITPNB;;ENST00000460566.5_1_22:28293057-28315179:-|nuORF;;nc|ENSG00000180957|P48739-3|PITPNB 2.8314337730407715 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17120 90.683 213.0 328400.0 25 0 76243.0 13648 HPSYPKII 8 100 477.7732914740935 953.532030014987 2 477.7735778689384 MULTI CID FTMS 0 0 0 17111 181457.578125 0.8695103166555619 -2 0.1718902587890625 9 Unmodified _HPSYPKII_ ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;nc|ENSG00000144554|Q9BXW9-4|FANCD2 34.18733598223924 0.3315367612694167 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{M(Oxidation (M))|F}AG{I|L}{I|L}{I|L} 9 4 + 49.587 0.0 0.0 5.2004 5.2004 79.038 0.0 0.0 0.0 7.147642715192504 25.6424927368726 7.147642715192504 6.478174818886373 0 0.7429928190999391 0.0 0.805462187404089 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{M(Oxidation (M))|F}AG{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{M(Oxidation (M))|F}Q{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}C[HV]G{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[HM]AG{I|L}{I|L}{I|L};[{I|L}P]EEAG{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[HM]Q{I|L}{I|L}{I|L};[{I|L}P]EEQ{I|L}{I|L}{I|L} 5.2004;4.521;3.3471;3.1624;3.1088;2.483;2.4294 -;-;-;-;-;-;- 476 1 1.281 57995.0 1.0 12114 5004 17111 HBL1_DMSO_200M_050219_2,17120 HBL1_DMSO_200M_050219_2,17120,HPSYPKII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17121 90.693 534.0 235180.0 25 0 28993.0 + 22831 LRQIALSI 8 116 457.2943230114901 912.5740930897804 2 457.2950622439384 MULTI CID FTMS 0 0 0 17111 163693.390625 1.0 0 0.0 10 Unmodified _LRQIALSI_ REV__ENST00000341509.9_1_15:66840934-66844112:-|nuORF 42.09456458481378 0.1992492688217789 4 [{I|L}A]GR{I|L}A{I|L}S{I|L} 9 -1 + 50.398 0.0 0.0 5.5226 5.5226 71.15 0.0 0.0 0.0 0.6069784035361181 14.571360300866978 0.6069784035361181 0.6069784035361181 0 0.9247425010840048 0.8239087409443188 0.4247425010840047 0.3494850021680094 [{I|L}A]GR{I|L}A{I|L}S{I|L};{[VA]|[{I|L}G]}AR{I|L}A{I|L}S{I|L};[Q{I|L}]R{I|L}A{I|L}S{I|L};[Q{I|L}][VG]{I|L}A{I|L}S{I|L};[{I|L}A]G[VG]{I|L}A{I|L}S{I|L};{[VA]|[{I|L}G]}A[VG]{I|L}A{I|L}S{I|L};[{I|L}A]G[K{I|L}]A{I|L}D{I|L};{[VA]|[{I|L}G]}A[K{I|L}]A{I|L}D{I|L};[Q{I|L}][K{I|L}]A{I|L}D{I|L};[{I|L}A]G[K{I|L}][W{I|L}]{I|L} 5.5226;5.4561;5.3356;4.3206;4.1306;4.0641;2.9745;2.908;2.7874;0.29668 -;-;-;-;-;-;-;-;-;- 287 1 1.281 101068.9 1.0 12115 5004 17111 HBL1_DMSO_200M_050219_2,17121 HBL1_DMSO_200M_050219_2,17121,LRQIALSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17122 90.705 707.0 208610.0 25 0 28317.0 + + 36648 YPWGVVQV 8 128 474.2546205765142 946.4946882198284 2 474.2531616091728 MULTI CID FTMS 0 0 0 17111 111873.453125 0.7546222304665021 2 -0.2361221313476562 11 Unmodified _TATVETVQV_ ENST00000483047.5_1_2:110321941-110325397:-|nuORF;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000164402|Q92599-2|SEPTIN8;ENST00000517342.1_1_8:57389817-57390279:-|nuORF;nc|ENSG00000164402|Q92599-4|SEPTIN8;ENSG00000186522|ENST00000397712|SEPTIN10;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;ENST00000468616.5_1_2:110303765-110325397:-|nuORF;ENSG00000164402|ENST00000378719|SEPTIN8;nc|ENSG00000186522|Q9P0V9-3|SEPTIN10;ENST00000506047.1_1_4:77936059-77941836:+|nuORF;nc|ENSG00000164402|Q92599-3|SEPTIN8 24.020572477871973 0.2255576514309169 4 [WP]GVYV{[QV]|[N{I|L}]|[RA]|[KV]} 8 -1 + 36.038 0.0 0.0 3.8075 3.8075 48.045 0.0 0.0 0.0 13.11696441278609 3.4594445392311286 3.4594445392311286 0.0 0 0.2215141619232908 1.2218487496163564 0.0 0.0 [WP]GVYV{[QV]|[N{I|L}]|[RA]|[KV]};[WP]GYVV{[QV]|[N{I|L}]|[RA]|[KV]};[WP]GVVY{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V{[QV]|[N{I|L}]|[RA]|[KV]};YY{I|L}YV{[QV]|[N{I|L}]|[RA]|[KV]};[WP][YR]V{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}[{M(Oxidation (M))|F}E]VV{[QV]|[N{I|L}]|[RA]|[KV]};[AG]V[{M(Oxidation (M))|F}E]VV{[QV]|[N{I|L}]|[RA]|[KV]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QD]|[EN]|[WG]|[KD]|[RS]}VV{[QV]|[N{I|L}]|[RA]|[KV]};YY{I|L}VY{[QV]|[N{I|L}]|[RA]|[KV]} 3.8075;3.8075;3.3034;2.4216;2.3434;2.2894;2.0961;2.0656;1.9937;1.8393 -;-;-;-;-;-;-;-;-;- 510 1 1.281 116117.2 1.0 12116 5004 17111 HBL1_DMSO_200M_050219_2,17122 HBL1_DMSO_200M_050219_2,17122,TATVETVQV False False YPWGVVQV 90.704815 474.253161609173 4431380.5 17111.0 ENST00000483047.5_1_2:110321941-110325397:-|nuORF;;nc|ENSG00000186522|Q9P0V9-2|SEPTIN10;;ENSG00000138758|ENST00000264893|SEPTIN11;;nc|ENSG00000164402|Q92599-2|SEPTIN8;;ENST00000517342.1_1_8:57389817-57390279:-|nuORF;;nc|ENSG00000164402|Q92599-4|SEPTIN8;;ENSG00000186522|ENST00000397712|SEPTIN10;;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;;ENST00000468616.5_1_2:110303765-110325397:-|nuORF;;ENSG00000164402|ENST00000378719|SEPTIN8;;nc|ENSG00000186522|Q9P0V9-3|SEPTIN10;;ENST00000506047.1_1_4:77936059-77941836:+|nuORF;;nc|ENSG00000164402|Q92599-3|SEPTIN8 4.087272485097249 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17123 90.719 800.0 146650.0 25 0 11408.0 -1 0 122 1063.987503382633 0 1063.989428699017 PEAK CID FTMS 0 0 0 17111 105760.8359375 0.465808878406816 -1 0.0702133178710937 12 4 {I|L}ATVT 5 -1 32.824 0.0 0.0 1.5439 0.0 0.0 1383.5733141825342 254.0782869928344 1637.6516011753686 0.0 0.0 0.0 0.0 0 0.0 0.0 1.841129063296272 0.0 {I|L}ATVT 1.5439 - 4728 + 1 1.281 76199.4 0.6000000238418579 12117 5004 17111 HBL1_DMSO_200M_050219_2,17123 HBL1_DMSO_200M_050219_2,17123, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17124 90.734 800.0 182570.0 25 0 18500.0 + -1 AYEFMSQAF 9 107 1092.5260276991448 2183.03750246509 2 1093.033129870892 MULTI CID FTMS 0 0 0 17111 96837.0703125 0.8556742585957496 4 -0.4801177978515625 13 ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENSG00000069329|ENST00000299138|VPS35 4 {[QS]|[NT]}AAPPPPP 9 -1 68.279 0.0 0.0 3.1277 0.0 0.0 0.0 1337.58500148926 1337.58500148926 32.46659009610505 0.0 0.0 0.0 0 1.0 0.0 0.2396518287104437 1.9049471895720984 {[QS]|[NT]}AAPPPPP 3.1277 - 4616 1 1.281 92661.5 0.5899999737739563 12118 5004 17111 HBL1_DMSO_200M_050219_2,17124 HBL1_DMSO_200M_050219_2,17124, False False AYEFMSQAF 90.733996 1093.03312987089 720288.4375 17111.0 ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 1.9208019226789477 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17125 90.748 800.0 92618.0 25 0 9293.3 + 14186 VVIADLHPVGW 11 117 603.251986147333 1204.489419361466 2 603.2532226443291 MULTI CID FTMS 0 0 0 17111 88402.203125 0.9257494651498605 1 -0.1196441650390625 14 Unmodified _IDHFLCDMDP_ ENSG00000198879|ENST00000397167|SFMBT2 13.042465956692816 0.6287021003332052 4 {I|L}D 2 8 32.474 0.0 0.0 2.6961 0.0 0.0 0.0 973.3671358697874 973.3671358697874 4.903637808696285 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + {I|L}D 2.6961 + + 471 + 1 1.281 56445.0 0.5199999809265137 12119 5004 17111 HBL1_DMSO_200M_050219_2,17125 HBL1_DMSO_200M_050219_2,17125,IDHFLCDMDP False False VVIADLHPVGW 90.747826 603.253222644329 745429.8125 17111.0 ENSG00000198879|ENST00000397167|SFMBT2 6.095885594685872 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17126 90.763 800.0 191060.0 25 0 27651.0 + -1 MLCEPAYWFV 10 149 666.2930912289509 1330.5716295247016 2 666.2961913943291 MULTI CID FTMS 0 0 0 17111 89388.875 0.208730010818709 -5 0.41986083984375 15 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LC(Carbamidomethyl (C))EPAYWFV_ REV__ENSG00000162434|ENST00000342505|JAK1 11.640296217721598 0.652229146672156 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YNPP{I|L}C{I|L}[HD] 11 -1 + 65.34 0.0 0.0 4.9107 4.9107 72.019 0.0 0.0 0.0 18.59122312673766 42.84440644703906 18.59122312673766 2.500000000000007 0 0.8807196863200843 1.2218487496163564 0.25 1.4604093769761874 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YNPP{I|L}C{I|L}[HD];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L}C{I|L}[HD];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YGGPP{I|L}C{I|L}[HD];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGYPP{I|L}C{I|L}[HD];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YNK[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}[HD];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYK[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}[HD];{NN|[MP]|[D{I|L}]|[EV]}[YG]WP{I|L}C{I|L}[HD];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YGGK[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}[HD];[{I|L}T]C(Carbamidomethyl (C))YK[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}[HD];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N{[QS]|[NT]}AA{I|L}C{I|L}[HD] 4.9107;4.7228;3.1271;2.9392;2.6086;2.4207;1.7814;1.6006;1.4987;1.4202 -;-;-;-;-;-;-;-;-;- 1825 1 1.281 117520.3 0.5299999713897705 12120 5004 17111 HBL1_DMSO_200M_050219_2,17126 HBL1_DMSO_200M_050219_2,17126,MLCEPAYWFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17128 90.768 14.0 3638600.0 25 0 452910.0 + 34942 SQITSLVTL 9 72 481.2818260360833 960.5490991389668 2 481.2822143435478 MULTI CID FTMS 0 0 0 17127 4144781.75 1.0 0 0.0 1 Unmodified _SQITSLVTL_ ENSG00000164815|ENST00000297431|ORC5;ENST00000477223.1_1_7:103767297-103805736:-|nuORF 41.8396318013385 0.0653578398400075 4 [{I|L}T]SQ{M(Oxidation (M))|F} 5 6 28.473 0.0 0.0 2.9642 0.0 0.0 0.0 381.2392596216417 381.2392596216417 -1.6715630200757374 0.0 -1.6715630200757374 0.0 0 0.0 1.3010299956639813 0.8807196863200843 0.0 [{I|L}T]SQ{M(Oxidation (M))|F} 2.9642 - 548 1 1.289 47405.6 1.0 12121 5005 17127 HBL1_DMSO_200M_050219_2,17128 HBL1_DMSO_200M_050219_2,17128,SQITSLVTL True True SQITSLVTL 90.767619 481.282214343548 67189552.0 17127.0 ENST00000477223.1_1_7:103767297-103805736:-|nuORF;;ENSG00000164815|ENST00000297431|ORC5 3.483288288116455 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17129 90.769 42.0 1361100.0 25 0 203130.0 + 10219 FQIVNPHLL 9 78 540.8138443086816 1079.6131356841631 2 540.8141357302666 MULTI CID FTMS 0 0 0 17127 741238.5 0.3890552659939296 1 -0.1164779663085937 2 Unmodified _FQIVNPHLL_ ENSG00000167325|ENST00000300738|RRM1 42.09456458481378 0.0639583784996157 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VNPH{I|L}{I|L} 9 0 + 47.33 0.0 0.0 4.3839 4.3839 79.073 0.0 0.0 0.0 34.41122510072759 2.147642715192504 2.147642715192504 9.208187539523747 0 0.9247425010840048 0.9208187539523752 0.0 0.0 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VNPH{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VGGPH{I|L}{I|L};[KP][VG]PNV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][RP]NV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][VG]PGGV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][RP]GGV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[KP][VG]PN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}V] 4.3839;3.531;2.7679;2.1628;1.919;1.3099;0.011424 +;-;-;-;-;-;- + 354 + 1 1.289 49842.7 1.0 12122 5005 17127 HBL1_DMSO_200M_050219_2,17129 HBL1_DMSO_200M_050219_2,17129,FQIVNPHLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17130 90.77 32.0 1457100.0 25 0 219060.0 10175 FQAEIAQLM 9 84 525.7676525799324 1049.5207522266646 2 525.7685424685478 MULTI CID FTMS 0 0 0 17127 828562.75 0.5732873515818869 1 -0.1164779663085937 3 Unmodified _FQAEIAQLM_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P 20.41453444215458 0.284085796332423 4 [AG]{M(Oxidation (M))|F}AE{I|L}AQ{I|L}M 10 3 + 40.866 0.0 0.0 3.8937 3.8937 67.767 0.0 0.0 0.0 4.600879154208812 8.535957323528109 4.600879154208812 2.218487496163561 0 0.8182503180159344 1.2218487496163564 0.0 0.0 [AG]{M(Oxidation (M))|F}AE{I|L}AQ{I|L}M;[AG]A{M(Oxidation (M))|F}E{I|L}AQ{I|L}M;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AE{I|L}AQ{I|L}M;[AG]AE{M(Oxidation (M))|F}{I|L}AQ{I|L}M;[QA]{M(Oxidation (M))|F}E{I|L}AQ{I|L}M;[AG]{M(Oxidation (M))|F}AE{I|L}A[AG]{I|L}M;[QA]E{M(Oxidation (M))|F}{I|L}AQ{I|L}M;[AG]A{M(Oxidation (M))|F}E{I|L}A[AG]{I|L}M;[YV]QA{I|L}{M(Oxidation (M))|F}[Y{M(Oxidation (M))|F}];[AG]{M(Oxidation (M))|F}AERR{I|L}M 3.8937;3.6824;3.4554;3.3955;3.244;3.0205;2.9571;2.8091;2.6309;2.6054 -;-;+;-;-;-;-;-;-;- + 333 1 1.289 45179.6 1.0 12123 5005 17127 HBL1_DMSO_200M_050219_2,17130 HBL1_DMSO_200M_050219_2,17130,FQAEIAQLM False True FQAEIPELQDISAL 90.769992 525.768542468548 531601.625 17127.0 nc|ENSG00000124496|Q96PN7|TRERF1;;ENSG00000124496|ENST00000695948|TRERF1;;nc|ENSG00000124496|Q96PN7-2|TRERF1;;nc|ENSG00000124496|Q96PN7-3|TRERF1;;nc|ENSG00000124496|Q96PN7-5|TRERF1;;nc|ENSG00000124496|Q96PN7-4|TRERF1 0.9636751761039098 3.0 False 14.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17131 90.772 86.0 1093400.0 25 0 191770.0 + 26357 NSNHMDPFA 9 117 516.7128926364896 1031.4112323397792 2 516.7140991091728 MULTI CID FTMS 0 0 0 17127 704799.4375 0.7500225636135941 -1 0.1196441650390625 4 Unmodified _NSNHMDPFA_ REV__ENSG00000110693|ENST00000683767|SOX6;REV__ENSG00000134532|ENST00000451604|SOX5;REV__nc|ENSG00000110693|P35712-2|SOX6;REV__nc|ENSG00000110693|P35712-3|SOX6;REV__nc|ENSG00000110693|P35712-4|SOX6;REV__nc|ENSG00000134532|P35711-2|SOX5;REV__nc|ENSG00000134532|P35711-3|SOX5;REV__nc|ENSG00000134532|P35711-4|SOX5;REV__nc|ENSG00000134532|P35711-5|SOX5 13.90604991867851 0.4602628045680013 4 [DG]Y{I|L}M 5 -1 38.646 0.0 0.0 3.7469 0.0 0.0 0.0 449.1515637208917 449.1515637208917 11.735162698957282 0.0 0.0 0.0 0 1.424742501084005 1.3979400086720375 0.3252574989159953 0.0 [DG]Y{I|L}M 3.7469 - 281 1 1.289 78195.9 1.0 12124 5005 17127 HBL1_DMSO_200M_050219_2,17131 HBL1_DMSO_200M_050219_2,17131,NSNHMDPFA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17132 90.774 79.0 520990.0 25 0 37249.0 + -1 NLYEEWTQV 9 78 591.2774969697134 590.2702205031134 1 591.2778808474541 MULTI CID FTMS 0 0 0 17127 534140.1875 1.0 0 0.0 5 nc|ENSG00000140750|Q68EM7-2|ARHGAP17;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;nc|ENSG00000140750|Q68EM7-3|ARHGAP17;ENSG00000140750|ENST00000289968|ARHGAP17;ENST00000576387.1_1_16:24960717-24966004:-|nuORF;ENST00000575656.5_1_16:24960717-24971282:-|nuORF;nc|ENSG00000140750|Q68EM7-6|ARHGAP17 4 {[QV]|[N{I|L}]|[RA]|[KV]}YE 4 -1 28.672 0.0 0.0 4.8575 0.0 0.0 0.0 68.01464123969461 68.01464123969461 6.989700043360188 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}YE 4.8575 - 40 1 1.289 38299.9 1.0 12125 5005 17127 HBL1_DMSO_200M_050219_2,17132 HBL1_DMSO_200M_050219_2,17132, False False NLYEEWTQV 90.773734 591.277880847454 4928776.0 17127.0 nc|ENSG00000140750|Q68EM7-2|ARHGAP17;;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;;nc|ENSG00000140750|Q68EM7-3|ARHGAP17;;ENSG00000140750|ENST00000289968|ARHGAP17;;ENST00000576387.1_1_16:24960717-24966004:-|nuORF;;ENST00000575656.5_1_16:24960717-24971282:-|nuORF;;nc|ENSG00000140750|Q68EM7-6|ARHGAP17 8.950550556182861 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17133 90.777 145.0 378200.0 25 0 30277.0 + 38726 TTYEGIFKTL 10 91 586.813520985239 1171.612489037278 2 586.8135253787041 MULTI CID FTMS 0 0 0 17127 289645.65625 0.3811008588713278 1 -0.1164779663085937 6 Unmodified _TTYEGIFKTL_ ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000432006.1_1_7:16625648-16626215:-|nuORF;ENST00000561539.1_1_16:28836974-28837213:+|nuORF;ENST00000562867.5_1_16:28834808-28837752:+|nuORF;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ENST00000566080.1_1_16:28837054-28837213:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 40.23920728925047 0.1550410903091231 4 {[DS]|[MA]|[CV]|TT}YE{[VA]|[{I|L}G]}{M(Oxidation (M))|F}KT{I|L} 10 0 + 41.419 0.0 0.0 3.5352 3.5352 73.029 0.0 0.0 0.0 19.726686530573776 14.291294632377571 14.291294632377571 6.532125137753432 0 0.4247425010840047 0.0 0.9247425010840048 0.0 + + {[DS]|[MA]|[CV]|TT}YE{[VA]|[{I|L}G]}{M(Oxidation (M))|F}KT{I|L};{[DS]|[MA]|[CV]|TT}Y[W{I|L}]{M(Oxidation (M))|F}KT{I|L};{[TV]|[{I|L}S]}A[HN][RK]Y[PS];{[DS]|[MA]|[CV]|TT}Y[RK][HN]P[VG] 3.5352;2.9777;0.86903;0.14837 +;-;-;- + 280 + 1 1.289 46095.5 1.0 12126 5005 17127 HBL1_DMSO_200M_050219_2,17133 HBL1_DMSO_200M_050219_2,17133,TTYEGIFKTL False True TTYEGIFKTL 90.77664 586.813525378704 13912017.0 17127.0 ENST00000563314.5_1_16:28834580-28846939:+|nuORF;;ENST00000561539.1_1_16:28836974-28837213:+|nuORF;;ENST00000562867.5_1_16:28834808-28837752:+|nuORF;;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;;ENST00000566080.1_1_16:28837054-28837213:+|nuORF;;ENST00000432006.1_1_7:16625648-16626215:-|nuORF;;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;;ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;;ENSG00000168488|ENST00000336783|ATXN2L;;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;;nc|ENSG00000168488|Q8WWM7-5|ATXN2L 7.724446614583333 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17134 90.779 100.0 1041300.0 25 0 80391.0 + 9676 FLQPELVKL 9 125 543.8331342372593 1085.6517155413185 2 544.3336059451103 MULTI CID FTMS 0 0 0 17127 291595.4375 0.7093311975221671 -1 0.1196441650390625 7 Unmodified _FLQPELVKL_ ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4 30.63653989081413 0.1413794767160703 4 [{I|L}P]EVKG{M(Oxidation (M))|F} 7 5 20.767 0.0 0.0 1.9129 0.0 0.0 0.0 312.1991147935248 312.1991147935248 2.2429169400203364 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [{I|L}P]EVKG{M(Oxidation (M))|F} 1.9129 - 778 1 1.289 86206.3 1.0 12127 5005 17127 HBL1_DMSO_200M_050219_2,17134 HBL1_DMSO_200M_050219_2,17134,FLQPELVKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17135 90.781 115.0 463640.0 25 0 30924.0 2256 AQFGYYFRV 9 84 575.7890356199696 0 575.7874633669853 PEAK CID FTMS 0 0 0 17127 221064.53125 1.0 0 0.0 8 Unmodified _AQFGYYFRV_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 25.399314129420983 0.152124705672316 4 {M(Oxidation (M))|F} 1 8 15.485 0.0 0.0 1.347 0.0 0.0 199.0971061812822 800.3738662576735 999.4709724389556 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.347 + + 87 + 1 1.289 46082.7 1.0 12128 5005 17127 HBL1_DMSO_200M_050219_2,17135 HBL1_DMSO_200M_050219_2,17135,AQFGYYFRV False True FVWEASHYL 90.781213 575.787463366985 1446895.75 17127.0 ENST00000593183.2_1_19:16013215-16014022:-|nuORF;;ENSG00000099821|ENST00000588649|POLRMT;;ENST00000578759.1_1_17:60214444-60217453:-|nuORF 3.6938958962758384 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17136 90.785 179.0 332600.0 25 0 32054.0 + 33501 SIISEVSSEL 10 88 532.2794688099813 1062.5443846867624 2 532.2799560427666 MULTI CID FTMS 0 0 0 17127 234659.890625 0.4479498840800759 1 -0.1164779663085937 9 Unmodified _SIISEVSSEL_ REV__ENSG00000164754|ENST00000297338|RAD21 29.081581746732265 0.3152867722954398 4 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L} 9 -1 + 73.326 0.0 0.0 6.9009 6.9009 85.908 0.0 0.0 0.0 6.53212513775344 16.478174818886373 6.53212513775344 6.53212513775344 0 0.3494850021680094 1.6989700043360187 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L};{[TV]|[{I|L}S]}VC(Carbamidomethyl (C))M{I|L}VE{I|L};{[TV]|[{I|L}S]}V[CG]M{I|L}VE{I|L};[{I|L}V]SC(Carbamidomethyl (C))M{I|L}VE{I|L};[{I|L}T][MN]M{I|L}VE{I|L};[{I|L}V]S[CG]M{I|L}VE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[MT]M{I|L}VE{I|L};{[TV]|[{I|L}S]}{I|L}SM[RD]E{I|L};{[TV]|[{I|L}S]}VTM[RD]E{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{M(Oxidation (M))|F}][TA]VE{I|L} 6.9009;6.2862;5.4196;5.2431;4.4423;4.3765;4.2382;4.1218;4.1218;3.9382 -;-;-;-;-;-;-;-;-;- 528 1 1.289 52466.6 1.0 12129 5005 17127 HBL1_DMSO_200M_050219_2,17136 HBL1_DMSO_200M_050219_2,17136,SIISEVSSEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17137 90.792 404.0 245140.0 25 0 27069.0 + 32129 RVPDFILEKI 10 73 615.3663614076636 1228.718169882127 2 615.3666259646416 MULTI CID FTMS 0 0 0 17127 199398.71875 0.2865248055612609 2 -0.2153167724609375 10 Unmodified _RVPDFILEKI_ ENSG00000198826|ENST00000361627|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A 51.76506608216692 0.0697913821149828 4 {[TV]|[{I|L}S]}G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L} 11 4 + 71.713 0.0 0.0 5.8364 5.8364 73.345 0.0 0.0 0.0 1.0958552769588863 14.211179668930017 1.0958552769588863 1.0958552769588863 0 1.836696871556164 0.958607314841775 0.5 0.0 {[TV]|[{I|L}S]}G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};{[QN]|[E{I|L}]|[KN]}[QP]{M(Oxidation (M))|F}{I|L}{I|L}EK{I|L};{[QN]|[E{I|L}]|[KN]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};{[TV]|[{I|L}S]}G{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}TR{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}EK{I|L};{[QN]|[E{I|L}]|[KN]}[QP]{M(Oxidation (M))|F}{I|L}{I|L}TR{I|L};{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}[EP]EK{I|L};[RV][DP]{M(Oxidation (M))|F}{I|L}{I|L}EK{I|L};{I|L}[R{M(Oxidation (M))|F}][TP]{I|L}{I|L}EK{I|L};{[QN]|[E{I|L}]|[KN]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}TR{I|L} 5.8364;5.7472;5.4015;5.2457;5.2088;5.1565;5.053;4.9026;4.8427;4.8108 -;-;-;-;-;-;-;+;-;- + 704 1 1.289 78644.3 1.0 12130 5005 17127 HBL1_DMSO_200M_050219_2,17137 HBL1_DMSO_200M_050219_2,17137,RVPDFILEKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17138 90.804 676.0 283100.0 25 0 31019.0 + 12772 GVPPGLFNV 9 167 450.2525653543077 898.4905777754153 2 450.2527038455009 MULTI CID FTMS 0 0 0 17127 154544.6875 0.8407426724894156 1 -0.1164779663085937 11 Unmodified _GVPPGLFNV_ ENSG00000143149|ENST00000354775|ALDH9A1;ENST00000491436.1_1_1:165638124-165649867:-|nuORF;nc|ENSG00000143149|P49189-2|ALDH9A1;nc|ENSG00000143149|P49189|ALDH9A1 38.15118350030904 0.0856056900103839 4 [VG]CKP 5 7 31.994 0.0 0.0 3.5609 0.0 0.0 0.0 411.20408044986567 411.20408044986567 11.398707089686646 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 [VG]CKP 3.5609 - 474 + 1 1.289 148030.3 1.0 12131 5005 17127 HBL1_DMSO_200M_050219_2,17138 HBL1_DMSO_200M_050219_2,17138,GVPPGLFNV True True GVPPGLFNV 90.803696 450.252703845501 3932102.0 17127.0 nc|ENSG00000143149|P49189-2|ALDH9A1;;ENST00000491436.1_1_1:165638124-165649867:-|nuORF;;nc|ENSG00000143149|P49189|ALDH9A1;;ENSG00000143149|ENST00000354775|ALDH9A1 4.15185288588206 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17139 90.807 168.0 270180.0 25 0 24136.0 + -1 VLHMQQTI 8 92 493.2610292132968 984.5075054933936 2 493.2606994509697 MULTI CID FTMS 0 0 0 17127 151293.28125 1.0 0 0.0 12 Oxidation (M) _VLHM(Oxidation (M))QQTI_ REV__ENSG00000114248|ENST00000316428|LRRC31;REV__nc|ENSG00000114248|Q6UY01-3|LRRC31;REV__nc|ENSG00000114248|Q6UY01-4|LRRC31 10.183394434864962 0.7604730176254005 4 T{I|L} 2 -1 21.211 0.0 0.0 2.1545 0.0 0.0 752.3649253926109 0.0 752.3649253926109 0.0 9.61758134947864 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 T{I|L} 2.1545 + + 56 + 1 1.289 40455.8 1.0 12132 5005 17127 HBL1_DMSO_200M_050219_2,17139 HBL1_DMSO_200M_050219_2,17139,VLHMQQTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17140 90.817 586.0 275610.0 25 0 22973.0 + 14051 ALLEDLGKASGL 12 149 593.8381106166642 0 593.8376953005791 PEAK CID FTMS 0 0 0 17127 123396.484375 0.5205843530729828 -1 0.1196441650390625 13 Unmodified _IALEEVLTWL_ ENST00000448973.6_1_16:684599-685202:-|nuORF;ENST00000456420.6_2_16:684599-686105:-|nuORF;ENSG00000130731|ENST00000301686|METTL26;nc|ENSG00000130731|Q96S19-3|METTL26;nc|ENSG00000130731|Q96S19-5|METTL26 46.020951573049366 0.0708370373963976 4 {I|L}ED{I|L}G 5 7 47.691 0.0 0.0 4.0223 0.0 0.0 184.12468376004605 471.2582284596334 655.3829122196794 0.0 0.0 0.0 0.0 0 1.6989700043360187 0.0 0.4247425010840047 0.0 {I|L}ED{I|L}G 4.0223 - 1948 + 1 1.289 123101.4 1.0 12133 5005 17127 HBL1_DMSO_200M_050219_2,17140 HBL1_DMSO_200M_050219_2,17140,IALEEVLTWL True False ALLEDLGKASGL 90.81725 593.837695300579 1883223.375 17127.0 ENST00000448973.6_1_16:684599-685202:-|nuORF;;ENST00000456420.6_2_16:684599-686105:-|nuORF;;ENSG00000130731|ENST00000301686|METTL26;;nc|ENSG00000130731|Q96S19-3|METTL26;;nc|ENSG00000130731|Q96S19-5|METTL26 6.69377597173055 2.0 False 12.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17141 90.822 232.0 219440.0 25 0 21357.0 + 20880 LMNKWSRSV 9 90 560.7997967562063 0 560.7989990115166 PEAK CID FTMS 0 0 0 17127 115936.71875 0.6809490732009585 1 -0.1164779663085937 14 Unmodified _LMNKWSRSV_ REV__ENST00000453654.6_3_7:137073903-137074059:-|nuORF 13.50788311687929 0.2720325786695375 4 {I|L}{I|L}D 3 -1 13.188 0.0 0.0 1.1779 0.0 0.0 128.0152428738068 647.3525478648605 775.3677907386673 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}D 1.1779 - 39 + 1 1.289 45180.6 1.0 12134 5005 17127 HBL1_DMSO_200M_050219_2,17141 HBL1_DMSO_200M_050219_2,17141,LMNKWSRSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17142 90.837 800.0 119090.0 25 0 4572.4 -1 0 111 1164.538671535127 3490.594185205581 3 1165.214160144329 MULTI CID FTMS 0 0 0 17127 98846.7265625 0.0929806144637146 -5 0.4865646362304687 15 4 D{I|L}VQY{M(Oxidation (M))|F}WQQAQS 12 -1 43.975 0.0 0.0 1.2598 0.0 0.0 1631.779684328431 362.1095965506785 1993.8892808791093 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L}VQY{M(Oxidation (M))|F}WQQAQS 1.2598 - 5614 + 1 1.289 64162.3 0.5299999713897705 12135 5005 17127 HBL1_DMSO_200M_050219_2,17142 HBL1_DMSO_200M_050219_2,17142, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17143 90.85 800.0 253680.0 25 0 41750.0 + 44442 YMIGSEVGNYL 11 154 623.2940470588727 1244.573541184545 2 623.2953979372978 MULTI CID FTMS 0 0 0 17127 97941.3515625 0.24551923474335 -2 0.1898574829101562 16 Unmodified _YMIGSEVGNYL_ ENSG00000099956|ENST00000644036|SMARCB1;nc|ENSG00000099956|Q12824-2|SMARCB1 65.23502041540118 0.047899150100457 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NGVYD{I|L} 8 6 66.962 0.0 0.0 5.3803 0.0 0.0 0.0 286.08355639325254 286.08355639325254 31.72782415885416 0.0 0.0 0.0 0 0.6307196863200843 2.0 1.1549471895720984 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NGVYD{I|L} 5.3803 - 7734 + 1 1.289 148638.9 0.550000011920929 12136 5005 17127 HBL1_DMSO_200M_050219_2,17143 HBL1_DMSO_200M_050219_2,17143,YMIGSEVGNYL True True YMIGSEVGNYL 90.850479 623.295397937298 7615588.5 17127.0 nc|ENSG00000099956|Q12824-2|SMARCB1;;ENSG00000099956|ENST00000644036|SMARCB1 4.3633378346761065 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17144 90.864 800.0 111160.0 25 0 21907.0 -1 0 101 1109.502977845278 2216.9914027573564 2 1110.004565417767 MULTI CID FTMS 0 0 0 17127 87800.359375 0.7649343974651851 -2 0.1898574829101562 17 4 [QT]M[YG]AQQNA{M(Oxidation (M))|F}YQVNNM[{I|L}P] 19 -1 + 104.8 0.0 0.0 4.7272 4.7272 51.383 0.0 0.0 0.0 2.396518287104456 2.396518287104456 2.396518287104456 0.0 0 1.1989700043360187 0.0 0.2396518287104437 1.1421590589602533 [QT]M[YG]AQQNA{M(Oxidation (M))|F}YQVNNM[{I|L}P];[QT]M[YG]AQQNA{M(Oxidation (M))|F}YKVNNM[{I|L}P];[QT]M[YQ]QQNA{M(Oxidation (M))|F}YKVNNM[{I|L}P];[QT]M[YQ]QQNA{M(Oxidation (M))|F}YQVNNM[{I|L}P];[QT]M[YG]AQ[AG]NA{M(Oxidation (M))|F}YKVNNM[{I|L}P];[QT]M[YG]AQQNA{M(Oxidation (M))|F}YQVNGGM[{I|L}P];[QT]M[YG]AQQNA{M(Oxidation (M))|F}YQVGGNM[{I|L}P];[QT]M[YG]AQQNA{M(Oxidation (M))|F}YKVNGGM[{I|L}P];[QT]M[YG]AQQNA{M(Oxidation (M))|F}Y[AG]VNNM[{I|L}P];[QT]M[YG]AQQGGA{M(Oxidation (M))|F}YQVNNM[{I|L}P] 4.7272;4.7272;4.4225;4.4225;4.3224;4.3224;4.3224;4.3224;4.3224;4.3224 -;-;-;-;-;-;-;-;-;- 6109 1 1.289 60383.6 0.5299999713897705 12137 5005 17127 HBL1_DMSO_200M_050219_2,17144 HBL1_DMSO_200M_050219_2,17144, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17145 90.879 800.0 74537.0 25 0 16578.0 -1 0 89 740.0039680446737 2216.990074734221 3 740.3374511599541 MULTI CID FTMS 0 0 0 17127 93337.796875 1.0 0 0.0 18 4 [QT]M[YG]AQNQA{M(Oxidation (M))|F}YQV 14 -1 66.028 0.0 0.0 2.9783 0.0 0.0 0.0 584.2495779717573 584.2495779717573 55.5703999876239 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.4247425010840047 [QT]M[YG]AQNQA{M(Oxidation (M))|F}YQV 2.9783 - 2291 1 1.289 52312.1 0.5099999904632568 12138 5005 17127 HBL1_DMSO_200M_050219_2,17145 HBL1_DMSO_200M_050219_2,17145, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17147 90.884 38.0 1738900.0 25 0 395770.0 + 30988 RLDEAFDFV 9 53 556.274186520605 1110.53382010801 2 556.2747070193291 MULTI CID FTMS 0 0 0 17146 1323068.25 1.0 0 0.0 1 Unmodified _RLDEAFDFV_ ENSG00000158050|ENST00000288943|DUSP2;ENST00000488952.1_1_2:96809564-96810280:-|nuORF 29.84058131909904 0.1515068451768857 4 EA{M(Oxidation (M))|F}D{M(Oxidation (M))|F}V 6 3 57.211 0.0 0.0 5.1517 0.0 0.0 384.21190077949376 0.0 384.21190077949376 0.0 49.11236583892361 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + EA{M(Oxidation (M))|F}D{M(Oxidation (M))|F}V 5.1517 + + 54 1 1.295 59536.8 1.0 12139 5006 17146 HBL1_DMSO_200M_050219_2,17147 HBL1_DMSO_200M_050219_2,17147,RLDEAFDFV False True RLDEAFDFV 90.88431 556.274707019329 11797789.0 17146.0 ENST00000488952.1_1_2:96809564-96810280:-|nuORF;;ENSG00000158050|ENST00000288943|DUSP2 7.8797346750895185 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17148 90.886 90.0 507600.0 25 0 79063.0 + 22336 KQVSDLISVL 10 67 551.329819081283 1100.6450852293658 2 551.3298217654228 MULTI CID FTMS 0 0 0 17146 510530.125 0.50499278443255 1 -0.0988388061523437 2 Unmodified _LPSLPYLSVL_ ENST00000581230.5_1_17:62496043-62497015:-|nuORF;ENSG00000108654|ENST00000225792|DDX5;nc|ENSG00000108654|P17844-2|DDX5 39.957323273325 0.1580177220464651 4 [VS][KQ]D{I|L}{I|L}SV{I|L} 10 6 + 72.853 0.0 0.0 6.6192 6.6192 91.389 0.0 0.0 0.0 14.673392606792037 47.1669877129645 14.673392606792037 18.226825097560425 0 0.4247425010840047 1.5228787452803376 1.274227503252014 0.0 [VS][KQ]D{I|L}{I|L}SV{I|L};[VS]E[{I|L}V][KQ]SV{I|L} 6.6192;4.9631 -;- 104 1 1.295 45112.1 1.0 12140 5006 17146 HBL1_DMSO_200M_050219_2,17148 HBL1_DMSO_200M_050219_2,17148,LPSLPYLSVL False False KQVSDLISVL 90.886306 551.329821765423 16312311.0 17146.0 ENST00000581230.5_1_17:62496043-62497015:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5 3.6152849594751992 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17149 90.887 19.0 1975600.0 25 0 325220.0 + 35755 SVIEQIVYV 9 64 525.297477774159 1048.580402615118 2 525.2979614138603 MULTI CID FTMS 0 0 0 17146 2346460.0 0.5164428727742809 -1 0.1164779663085937 3 Unmodified _SVIEQIVYV_ ENSG00000077150|ENST00000661543|NFKB2;nc|ENSG00000077150|Q00653-4|NFKB2 46.020951573049366 0.0490941689151868 4 [VS]{I|L}EQ{I|L} 6 3 48.677 0.0 0.0 4.6422 0.0 0.0 0.0 376.1874942501367 376.1874942501367 28.003122090841828 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.2302046884880935 0.0 + [VS]{I|L}EQ{I|L} 4.6422 + + 249 1 1.295 37437.5 1.0 12141 5006 17146 HBL1_DMSO_200M_050219_2,17149 HBL1_DMSO_200M_050219_2,17149,SVIEQIVYV True True SVIEQIVYV 90.887485 525.29796141386 83954648.0 17146.0 nc|ENSG00000077150|Q00653-4|NFKB2;;ENSG00000077150|ENST00000661543|NFKB2 5.963431358337402 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17150 90.889 43.0 1624900.0 25 0 204840.0 + 22390 LPSSVLHII 9 79 489.8026421894774 977.5907314457548 2 489.8030883669853 MULTI CID FTMS 0 0 0 17146 1301576.25 0.8753255377993728 -1 0.1164779663085937 4 Unmodified _LPSSVLHII_ ENSG00000000460|ENST00000359326|C1orf112 57.47134341890925 0.0274820932774257 4 {I|L}PS[VS]{I|L}H{I|L}{I|L} 9 0 + 68.025 0.0 0.0 6.9584 6.9584 93.739 0.0 0.0 0.0 43.288007009185534 8.595269404621504 8.595269404621504 29.96076252868371 0 1.6989700043360187 2.0 0.0 0.0 + + {I|L}PS[VS]{I|L}H{I|L}{I|L};{I|L}P[HV]{[WT]|[RM]}{I|L}{I|L};{I|L}[KQ]N{I|L}H{I|L}{I|L};{I|L}[KQ]GG{I|L}H{I|L}{I|L} 6.9584;3.8936;3.8154;2.868 +;-;-;- + 315 + 1 1.295 58561.6 1.0 12142 5006 17146 HBL1_DMSO_200M_050219_2,17150 HBL1_DMSO_200M_050219_2,17150,LPSSVLHII True True LPSSVLHII 90.888687 489.803088366985 30157290.0 17146.0 ENSG00000000460|ENST00000359326|C1orf112 4.6727564334869385 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17151 90.89 62.0 1617700.0 25 0 118900.0 + 9677 FLQPELVKL 9 113 543.8331342372593 1085.6517155413185 2 543.8321411013603 MULTI CID FTMS 0 0 0 17146 649135.5625 1.0 0 0.0 5 Unmodified _FLQPELVKL_ ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4 43.85829265575387 0.0542763391141878 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[EP]{I|L}VK{I|L} 9 0 + 23.351 0.0 0.0 2.1509 2.1509 62.547 0.0 0.0 0.0 3.256886463274288 1.3847681224404234 1.3847681224404234 1.3847681224404234 0 0.7742275032520141 0.0 0.5 0.6462566630072955 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[EP]{I|L}VK{I|L};[EP]{I|L}VKG[{I|L}A]{M(Oxidation (M))|F}{I|L};[EP]{I|L}VK[Q{I|L}]{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}PVKG[{I|L}A]{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}PVK[Q{I|L}]{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}[{I|L}P]RG[{I|L}A]{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG][EP]{I|L}VK{I|L};{[TV]|[{I|L}S]}[{I|L}P]R[Q{I|L}]{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[EP]{I|L}[K{I|L}]V;[VP]{[QN]|[E{I|L}]|[KN]}KG[{I|L}A]{M(Oxidation (M))|F}{I|L} 2.1509;2.0233;1.9762;1.8611;1.814;1.3066;1.3027;1.2595;1.0168;0.13401 +;-;-;-;-;-;-;-;-;- + 388 + 1 1.295 79479.6 1.0 12143 5006 17146 HBL1_DMSO_200M_050219_2,17151 HBL1_DMSO_200M_050219_2,17151,FLQPELVKL True True FLQPELVKL 90.89022 543.83214110136 10414734.0 17146.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4 4.239845275878906 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17152 90.895 230.0 618860.0 25 0 38355.0 -1 0 136 1052.51794502405 3154.5320056723504 3 1052.855029284954 MULTI CID FTMS 0 0 0 17146 523836.75 1.0 0 0.0 6 4 [MN]MVWH 6 -1 48.148 0.0 0.0 1.5263 0.0 0.0 0.0 2353.101963928804 2353.101963928804 19.962855948396907 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [MN]MVWH 1.5263 - 1585 + 1 1.295 96322.4 1.0 12144 5006 17146 HBL1_DMSO_200M_050219_2,17152 HBL1_DMSO_200M_050219_2,17152, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17153 90.896 60.0 1195000.0 25 0 135740.0 + 14017 IAFHTIPVI 9 97 505.8055883388616 0 505.8055297732353 PEAK CID FTMS 0 0 0 17146 470539.40625 0.7718491497555161 -1 0.1164779663085937 7 Unmodified _IAFHTIPVI_ ENSG00000042445|ENST00000295802|RETSAT;nc|ENSG00000042445|Q6NUM9-2|RETSAT 32.116972079565 0.1004713836468113 4 {I|L}T 2 7 23.711 0.0 0.0 2.3486 0.0 0.0 327.2132009232857 465.22605310611567 792.4392540294014 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.8494850021680094 0.0 {I|L}T 2.3486 - 242 + 1 1.295 58408.6 1.0 12145 5006 17146 HBL1_DMSO_200M_050219_2,17153 HBL1_DMSO_200M_050219_2,17153,IAFHTIPVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17154 90.898 80.0 1012300.0 25 0 195290.0 + 26531 NVIDNLIVA 9 82 485.7819795896355 969.549406246071 2 485.7823058962822 MULTI CID FTMS 0 0 0 17146 435867.6875 0.0052239853271236 10 -1.13421630859375 8 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 25.399314129420983 0.2080152500878129 4 {[NV]|[RG]}E{[NV]|[RG]}{I|L}C(Carbamidomethyl (C)) 7 5 19.71 0.0 0.0 2.0329 0.0 0.0 0.0 138.15460579124604 138.15460579124604 6.945422223379119 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 {[NV]|[RG]}E{[NV]|[RG]}{I|L}C(Carbamidomethyl (C)) 2.0329 - 214 1 1.295 71008.3 1.0 12146 5006 17146 HBL1_DMSO_200M_050219_2,17154 HBL1_DMSO_200M_050219_2,17154,NVIDNLIVA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17155 90.902 226.0 325470.0 25 0 62331.0 + 40 AAAPQLLIV 9 95 448.2840871053542 894.5536212775085 2 448.2846252322197 MULTI CID FTMS 0 0 0 17146 256619.65625 0.1872403103857787 -3 0.30633544921875 9 Unmodified _AAAPQLLIV_ ENSG00000130303|ENST00000252593|BST2;nc|ENSG00000130303|Q10589-2|BST2 30.22481116460888 0.1466181017706357 4 [QP]{I|L}{I|L}AAA{I|L}V 9 6 + 50.741 0.0 0.0 5.6722 5.6722 79.861 0.0 0.0 0.0 12.21848749616356 10.330145895351848 10.330145895351848 5.440680443502757 0 0.7429928190999391 1.0457574905606752 0.0 0.0 [QP]{I|L}{I|L}AAA{I|L}V;[QP]{I|L}A{I|L}AA{I|L}V;[QP]{I|L}AAA{I|L}{I|L}V;[QP]{I|L}AA{I|L}A{I|L}V;AA[VP]{I|L}AAA{I|L}V;[QP]{I|L}{[NV]|[RG]}{I|L}{I|L}V;[QP]{I|L}{I|L}{[NV]|[RG]}{I|L}V;AA[VP]A{I|L}AA{I|L}V;{I|L}{I|L}[QP]AAA{I|L}V;[QP]{[NV]|[RG]}{I|L}{I|L}{I|L}V 5.6722;5.064;4.6703;4.3338;4.3063;4.198;3.8615;3.6981;3.4364;3.4166 -;-;-;-;-;-;-;-;-;- 304 1 1.295 64121.5 1.0 12147 5006 17146 HBL1_DMSO_200M_050219_2,17155 HBL1_DMSO_200M_050219_2,17155,AAAPQLLIV False True AAAPQLLIV 90.902151 448.28462523222 13241356.0 17146.0 ENSG00000130303|ENST00000252593|BST2;;nc|ENSG00000130303|Q10589-2|BST2 1.6150085131327312 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17156 90.907 282.0 364060.0 25 0 22675.0 + 35443 STLHLVLRL 9 116 351.2257507279637 1050.6554227840911 3 351.2259094119072 MULTI CID FTMS 0 0 0 17146 263727.0625 0.013016980085225 10 -1.13421630859375 10 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 36.12702656103203 0.0967173616627612 4 {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}] 9 0 + 44.503 0.0 0.0 4.2358 4.2358 74.326 0.0 0.0 0.0 21.281695168243097 5.642492736872597 5.642492736872597 5.752574989159953 0 0.5629529932484498 0.0 0.0 0.0 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}];{[MG]|[TS]}{I|L}{I|L}HV{I|L}[R{I|L}];{[MG]|[TS]}{I|L}H{I|L}{I|L}V[R{I|L}];{[MG]|[TS]}{I|L}{I|L}H{I|L}V[R{I|L}] 4.2358;3.6883;3.5705;3.023 +;-;-;- + 144 + 1 1.295 84133.5 1.0 12148 5006 17146 HBL1_DMSO_200M_050219_2,17156 HBL1_DMSO_200M_050219_2,17156,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17157 90.915 431.0 324360.0 25 0 30052.0 + 14654 IIMLEALERV 10 98 601.8443357399868 1201.6741185467736 2 601.8445922732353 MULTI CID FTMS 0 0 0 17146 245073.140625 0.6950474392265367 -1 0.1164779663085937 11 Oxidation (M) _IIM(Oxidation (M))LEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 49.52724829834842 0.0829255630816734 4 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}E[RV] 10 0 + 90.527 0.0 0.0 7.5334 7.5334 88.19 0.0 0.0 0.0 62.110403483680656 7.001962355242952 7.001962355242952 7.135601970822776 0 1.1861818737241734 2.0 0.3807196863200844 0.2742275032520141 + + {I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}E[RV];{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}[RD]{I|L};{I|L}{I|L}YPEA{I|L}E[RV];{I|L}{I|L}{M(Oxidation (M))|F}{I|L}V[DV]E[RV];{I|L}{I|L}{M(Oxidation (M))|F}{I|L}VE[DV][RV];{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EV[DV][RV];{I|L}{I|L}YPEA{I|L}[RD]{I|L};{I|L}{I|L}{M(Oxidation (M))|F}V{I|L}[DV]E[RV];{I|L}{I|L}{M(Oxidation (M))|F}V[DV]{I|L}E[RV];{I|L}{I|L}{M(Oxidation (M))|F}{I|L}V[DV][RD]{I|L} 7.5334;6.9396;6.5356;6.2638;6.1173;6.077;5.9418;5.7698;5.7295;5.67 +;-;-;-;-;-;-;-;-;- + 1411 + 1 1.295 104434.5 1.0 12149 5006 17146 HBL1_DMSO_200M_050219_2,17157 HBL1_DMSO_200M_050219_2,17157,IIMLEALERV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17158 90.923 436.0 459660.0 25 0 23859.0 -1 0 118 943.475313160726 1884.936073388252 2 943.9719726443292 MULTI CID FTMS 0 0 0 17146 238649.765625 0.8426200225506559 13 -1.4709854125976562 12 4 [NP]N{I|L}{I|L}T 6 -1 43.752 0.0 0.0 2.3212 0.0 0.0 0.0 1229.5547617029583 1229.5547617029583 17.830918867322296 0.0 0.0 0.0 0 0.3807196863200844 1.0969100130080565 0.3252574989159953 1.110924374808178 [NP]N{I|L}{I|L}T 2.3212 - 1431 1 1.295 130858.9 1.0 12150 5006 17146 HBL1_DMSO_200M_050219_2,17158 HBL1_DMSO_200M_050219_2,17158, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17159 90.928 280.0 393370.0 25 0 36193.0 + 45119 YPYVGILHV 9 132 530.7949474362837 1059.5753419393673 2 530.7951537966728 MULTI CID FTMS 0 0 0 17146 225841.375 0.747806199954947 -1 0.1164779663085937 13 Unmodified _YPYVGILHV_ ENSG00000161904|ENST00000293760|LEMD2;nc|ENSG00000161904|Q8NC56-2|LEMD2 93.76273176245871 0.0134559174279925 4 YPYVG{I|L}{I|L}HV 9 0 + 88.106 0.0 0.0 8.3152 8.3152 82.003 0.0 0.0 0.0 15.563025007672875 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 1.8243923658886183 2.0 0.0 0.0 + + YPYVG{I|L}{I|L}HV;YPYVG{I|L}{I|L}VH;YPYVG{I|L}VH{I|L};YPYVG{I|L}V{I|L}H;{I|L}{M(Oxidation (M))|F}YVG{I|L}{I|L}HV;{I|L}{M(Oxidation (M))|F}YVG{I|L}{I|L}VH;{I|L}{M(Oxidation (M))|F}YVG{I|L}VH{I|L};{I|L}{M(Oxidation (M))|F}YVG{I|L}V{I|L}H;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YVG{I|L}{I|L}HV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VG{I|L}Y{I|L}HV 8.3152;8.1491;7.6556;7.1422;6.8464;6.6803;6.1868;5.6734;4.3521;4.2853 +;-;-;-;-;-;-;-;+;- + 1060 + 1 1.295 93779.2 1.0 12151 5006 17146 HBL1_DMSO_200M_050219_2,17159 HBL1_DMSO_200M_050219_2,17159,YPYVGILHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17160 90.936 433.0 299090.0 25 0 91265.0 -1 0 103 651.3066904296896 2601.1976558523584 4 651.5583373904228 MULTI CID FTMS 0 0 0 17146 212374.71875 0.5881725577326835 2 -0.2439956665039062 14 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 38.19 0.0 0.0 1.4682 0.0 0.0 0.0 1659.6518340333012 1659.6518340333012 16.675011585484455 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.2887254899964357 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.4682 - 801 1 1.295 99587.0 1.0 12152 5006 17146 HBL1_DMSO_200M_050219_2,17160 HBL1_DMSO_200M_050219_2,17160, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17161 90.943 390.0 318330.0 25 0 19650.0 -1 0 112 849.0656161553225 2544.175019066168 3 849.3995239138603 MULTI CID FTMS 0 0 0 17146 221463.46875 0.9454598600560632 -1 0.1164779663085937 15 4 [YQ]{I|L}HV{[QN]|[E{I|L}]|[KN]}AY{I|L}V 11 -1 65.966 0.0 0.0 2.5928 0.0 0.0 0.0 1212.4481127109832 1212.4481127109832 11.915095192732224 0.0 0.0 0.0 0 0.8807196863200843 1.0969100130080565 0.0 1.1989700043360187 [YQ]{I|L}HV{[QN]|[E{I|L}]|[KN]}AY{I|L}V 2.5928 - 603 + 1 1.295 93137.3 1.0 12153 5006 17146 HBL1_DMSO_200M_050219_2,17161 HBL1_DMSO_200M_050219_2,17161, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17162 90.947 181.0 301660.0 25 0 30798.0 -1 MNLQRQKSL 9 79 567.3081119579417 1132.6016709826831 2 567.3106567263603 MULTI CID FTMS 0 0 0 17146 199449.265625 0.7336084336774683 -5 0.50274658203125 16 Oxidation (M) _M(Oxidation (M))NLQRQKSL_ ENSG00000068781|ENST00000394754|STON1-GTF2A1L;ENSG00000243244|ENST00000404752|STON1;nc|ENSG00000243244|Q9Y6Q2-2|STON1;nc|ENSG00000243244|Q9Y6Q2-3|STON1 24.020572477871973 0.2255576514309169 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}KK{I|L}E{[QN]|[E{I|L}]|[KN]} 9 -1 + 30.366 0.0 0.0 2.681 2.681 69.597 0.0 0.0 0.0 1.865677915492516 14.881062318217108 1.865677915492516 5.197953115119063 0 1.0 0.0 0.0 0.3252574989159953 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}KK{I|L}E{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}K[K{I|L}][HA]Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}K[K{I|L}][HS]{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}MKK{I|L}E{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}K{I|L}[K{I|L}][HA]Y;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[K{I|L}]{I|L}E{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}K{I|L}[K{I|L}][HS]{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}[K{I|L}][HA]Y 2.681;2.2221;1.7557;1.0329;0.8037;0.62803;0.33728;0.096454 -;-;-;-;-;-;-;- 128 1 1.295 46417.3 1.0 12154 5006 17146 HBL1_DMSO_200M_050219_2,17162 HBL1_DMSO_200M_050219_2,17162,MNLQRQKSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17163 90.95 147.0 295180.0 25 0 25788.0 24920 MPPGPGIPPLM 11 71 553.7911702734275 0 553.7907592654228 PEAK CID FTMS 0 0 0 17146 187598.75 0.530483848818872 5 -0.5652008056640625 17 Unmodified _MPPGPGIPPLM_ ENSG00000010244|ENST00000394670|ZNF207;ENST00000582705.1_1_17:30689933-30692512:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207 15.847184025352805 0.3962645171176329 4 PPP{I|L} 4 7 13.761 0.0 0.0 1.2447 0.0 0.0 552.26622618963 146.02863489322502 698.2948610828549 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 PPP{I|L} 1.2447 - 77 + 1 1.295 40770.0 1.0 12155 5006 17146 HBL1_DMSO_200M_050219_2,17163 HBL1_DMSO_200M_050219_2,17163,MPPGPGIPPLM False True PGMPPGIPPLM 90.95033 553.790759265423 5130401.5 17146.0 ENSG00000010244|ENST00000394670|ZNF207;;nc|ENSG00000010244|O43670-3|ZNF207;;nc|ENSG00000010244|O43670-2|ZNF207;;ENST00000577324.1_1_17:30677304-30687987:+|nuORF;;nc|ENSG00000010244|O43670|ZNF207 0.0354389498631159 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17164 90.964 800.0 185730.0 25 0 6287.2 -1 0 116 1159.2862323585657 4633.115823567863 4 1159.542041003704 MULTI CID FTMS 0 0 0 17146 168734.921875 0.9472354130692626 -1 0.1164779663085937 18 4 VQY{M(Oxidation (M))|F}ANQQAED 11 -1 61.778 0.0 0.0 1.3334 0.0 0.0 3003.3945486565854 333.1312655084594 3336.5258141650447 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 1.1861818737241734 VQY{M(Oxidation (M))|F}ANQQAED 1.3334 - 1389 + 1 1.295 95171.3 0.6000000238418579 12156 5006 17146 HBL1_DMSO_200M_050219_2,17164 HBL1_DMSO_200M_050219_2,17164, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17165 90.973 507.0 343430.0 25 0 46745.0 + 18920 LAYPRPIRWVL 11 132 461.9488409019351 1382.8246933060052 3 462.2894470095634 MULTI CID FTMS 0 0 0 17146 176918.03125 0.4918733784507255 4 -0.4567489624023437 19 Unmodified _LAYPRPIRWVL_ ENST00000375895.6_1_6:31632636-31633491:-|nuORF 3.2813086475875832 0.8596665074481906 4 [WP]A{I|L}{I|L} 5 8 29.666 0.0 0.0 2.1453 0.0 0.0 0.0 799.4630482052886 799.4630482052886 14.471580313422193 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [WP]A{I|L}{I|L} 2.1453 - 268 1 1.295 135890.1 1.0 12157 5006 17146 HBL1_DMSO_200M_050219_2,17165 HBL1_DMSO_200M_050219_2,17165,LAYPRPIRWVL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17166 90.978 272.0 469150.0 25 0 56390.0 + 14234 IDRVNFHILV 10 88 613.3539126399554 0 613.3553344607353 PEAK CID FTMS 0 0 0 17146 148098.578125 0.5215004925427531 -2 0.2361221313476562 20 Unmodified _IDRVNFHILV_ REV__ENSG00000021300|ENST00000354190|PLEKHB1;REV__ENST00000541760.1_1_11:73360074-73362936:+|nuORF;REV__ENST00000544532.5_1_11:73360074-73362871:+|nuORF;REV__nc|ENSG00000021300|Q9UF11-2|PLEKHB1;REV__nc|ENSG00000021300|Q9UF11-3|PLEKHB1;REV__nc|ENSG00000021300|Q9UF11-4|PLEKHB1 15.248480904072842 0.3349989633518451 4 {I|L}{I|L} 2 -1 7.9588 0.0 0.0 0.64986 0.0 0.0 432.2058141050505 563.2946667438612 995.5004808489116 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 0.64986 + + 56 + 1 1.295 98256.1 1.0 12158 5006 17146 HBL1_DMSO_200M_050219_2,17166 HBL1_DMSO_200M_050219_2,17166,IDRVNFHILV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17168 90.983 59.0 838860.0 25 0 73046.0 + 22308 LPSELIVHI 9 72 510.80784414258346 1019.601135351967 2 510.8084289431572 MULTI CID FTMS 0 0 0 17167 708837.875 0.3599308053751381 2 -0.2242889404296875 1 Unmodified _LPSELIVHI_ ENSG00000165355|ENST00000298097|FBXO33 57.47134341890925 0.0274820932774257 4 {I|L}PSE{I|L}{I|L}VH{I|L} 9 0 + 103.89 0.0 0.0 10.19 10.19 97.856 0.0 0.0 0.0 80.64957542276183 10.747534640495177 10.747534640495177 22.143735691510784 0 1.774227503252014 2.0 0.4247425010840047 0.0 + + {I|L}PSE{I|L}{I|L}VH{I|L};{I|L}PSE{I|L}{I|L}[H{I|L}]V;[{I|L}P]SE{I|L}VH{I|L}{I|L};[PS]E{I|L}{I|L}VH{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}P{I|L}{I|L}VH{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}P{I|L}VH{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}V[{I|L}P]H{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}V[H{I|L}]P{I|L}{I|L};[HV]{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}P{I|L}{I|L};[H{I|L}][{I|L}V]{[ES]|[DT]|[{I|L}C]}P{I|L}{I|L} 10.19;8.0178;6.6597;6.4038;4.9102;4.1465;1.3267;1.154;0.23885;0.066143 +;-;-;-;-;-;-;-;-;- + 312 + 1 1.3 48724.2 1.0 12159 5007 17167 HBL1_DMSO_200M_050219_2,17168 HBL1_DMSO_200M_050219_2,17168,LPSELIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17169 90.985 40.0 1983000.0 25 0 192640.0 + 22624 LPYLVPKL 8 89 471.80487791902186 941.5952029048436 2 471.8050414919853 MULTI CID FTMS 0 0 0 17167 1369601.25 1.0 0 0.0 2 Unmodified _LPYLVPKL_ ENSG00000089154|ENST00000300648|GCN1 63.562846038646086 0.116059504757595 4 {I|L}PY{I|L}VPK{I|L} 8 0 + 80.24 0.0 0.0 8.5217 8.5217 94.562 0.0 0.0 0.0 31.638568026386693 11.760912590556812 11.760912590556812 11.760912590556812 0 1.5114393726401687 1.5228787452803376 0.0 0.0 + + {I|L}PY{I|L}VPK{I|L};{I|L}PY{I|L}V{I|L}[KP];{I|L}{I|L}{M(Oxidation (M))|F}{I|L}VPK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}V{I|L}[KP];{I|L}{I|L}{[SA]|[TG]}{I|L}{[QG]|[NA]}K{I|L};{I|L}{I|L}{[SA]|[TG]}V[QA]K{I|L} 8.5217;7.2727;6.2393;4.9902;1.2621;1.0751 +;-;-;-;-;- + 222 + 1 1.3 67111.0 1.0 12160 5007 17167 HBL1_DMSO_200M_050219_2,17169 HBL1_DMSO_200M_050219_2,17169,LPYLVPKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17170 90.986 38.0 2248700.0 25 0 179150.0 + 30203 QVVPVLVHL 9 103 502.3186521057346 1002.6227512782692 2 502.3187744021416 MULTI CID FTMS 0 0 0 17167 1406183.75 1.0 0 0.0 3 Unmodified _QVVPVLVHL_ ENSG00000039123|ENST00000230640|MTREX 70.86452775946826 0.0207647612749057 4 {[QV]|[N{I|L}]|[RA]|[KV]}VPV{I|L}VH{I|L} 9 0 + 70.812 0.0 0.0 7.0627 7.0627 95.227 0.0 0.0 0.0 38.32863583597245 4.031148066561215 4.031148066561215 70.81215024481537 0 0.6989700043360187 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}VPV{I|L}VH{I|L} 7.0627 + + 159 + 1 1.3 69453.6 1.0 12161 5007 17167 HBL1_DMSO_200M_050219_2,17170 HBL1_DMSO_200M_050219_2,17170,QVVPVLVHL True True QVVPVLVHL 90.985849 502.318774402142 11401028.0 17167.0 ENSG00000039123|ENST00000230640|MTREX 7.17056941986084 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17171 90.987 44.0 1308300.0 25 0 124860.0 + 44978 YPRLSIPNL 9 76 536.81079257504 1071.6070322168798 2 536.8110839724541 MULTI CID FTMS 0 0 0 17167 1164495.5 0.9686342620030636 -2 0.2153167724609375 4 Unmodified _YPRLSIPNL_ ENSG00000242265|ENST00000612748|PEG10;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 36.12702656103203 0.0967173616627612 4 APN{I|L} 4 6 36.727 0.0 0.0 3.4273 0.0 0.0 658.3727315350424 0.0 658.3727315350424 0.0 25.823872065994564 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.7302046884880937 APN{I|L} 3.4273 - 264 + 1 1.3 54974.2 1.0 12162 5007 17167 HBL1_DMSO_200M_050219_2,17171 HBL1_DMSO_200M_050219_2,17171,YPRLSIPNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17172 90.988 43.0 1924900.0 25 0 182290.0 29466 QLIEVIEKL 9 120 542.8344117803898 1083.6542706275795 2 542.8347045779228 MULTI CID FTMS 0 0 0 17167 982787.0 0.5157769521196343 -1 0.0988388061523437 5 Unmodified _QLIEVIEKL_ ENSG00000103723|ENST00000535359|AP3B2;nc|ENSG00000103723|Q13367-3|AP3B2;nc|ENSG00000103723|Q13367|AP3B2 36.12702656103203 0.0967173616627612 4 {[QN]|[E{I|L}]|[KN]}KV{I|L}{M(Oxidation (M))|F}{I|L} 7 5 35.925 0.0 0.0 3.3152 0.0 0.0 0.0 238.1188786586961 238.1188786586961 15.19949905905996 0.0 0.0 0.0 0 0.3252574989159953 0.8538719643217619 0.8684151806525389 0.0 {[QN]|[E{I|L}]|[KN]}KV{I|L}{M(Oxidation (M))|F}{I|L} 3.3152 - 659 1 1.3 69122.1 1.0 12163 5007 17167 HBL1_DMSO_200M_050219_2,17172 HBL1_DMSO_200M_050219_2,17172,QLIEVIEKL True False DSYEFLKAI 90.988289 542.834704577923 3876272.0 17167.0 nc|ENSG00000142856|Q13352-5|ITGB3BP;;ENSG00000142856|ENST00000271002|ITGB3BP 4.252377351125081 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17173 90.991 113.0 538060.0 25 0 51940.0 + 28571 PTSLFAVTV 9 91 467.7655940327321 933.5166351322642 2 467.7654601931572 MULTI CID FTMS 0 0 0 17167 451017.40625 0.8243286481531913 1 -0.1451568603515625 6 Unmodified _PTSLFAVTV_ ENSG00000153187|ENST00000640218|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF;nc|ENSG00000153187|Q00839-2|HNRNPU 44.40701690623563 0.0526327925666318 4 [TP]S{I|L}A{M(Oxidation (M))|F} 6 4 30.318 0.0 0.0 3.2478 0.0 0.0 0.0 314.170357626658 314.170357626658 7.355702710561538 0.0 0.0 0.0 0 0.0 0.6989700043360187 2.073107455975516 0.0 [TP]S{I|L}A{M(Oxidation (M))|F} 3.2478 - 267 1 1.3 51495.8 1.0 12164 5007 17167 HBL1_DMSO_200M_050219_2,17173 HBL1_DMSO_200M_050219_2,17173,PTSLFAVTV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17174 90.993 91.0 617160.0 25 0 123150.0 14015 IAFFTTASV 9 84 478.7571883610766 955.4998237889532 2 478.7568542361259 MULTI CID FTMS 0 0 0 17167 312322.6875 0.7501276691560026 1 -0.1451568603515625 7 Unmodified _IAFFTTASV_ ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-2|TAS1R1 28.486842064014134 0.1687311288560894 4 {I|L}A{M(Oxidation (M))|F}V[HC]PG{I|L} 9 6 + 54.882 0.0 0.0 5.7438 5.7438 72.424 0.0 0.0 0.0 25.49681237692305 0.7918124604762511 0.7918124604762511 0.7918124604762511 0 0.4247425010840047 2.0 0.0 0.0 {I|L}A{M(Oxidation (M))|F}V[HC]PG{I|L};{I|L}A{M(Oxidation (M))|F}P[WH]SV;{I|L}A{M(Oxidation (M))|F}V[HC]PAV;{I|L}AV{M(Oxidation (M))|F}[HC]PG{I|L};{I|L}AV{M(Oxidation (M))|F}[HC]PAV;[C(Carbamidomethyl (C))R]KK[HD]{I|L} 5.7438;5.661;5.4767;5.0123;4.7451;0.025712 -;-;-;-;-;- 116 + 1 1.3 47586.5 1.0 12165 5007 17167 HBL1_DMSO_200M_050219_2,17174 HBL1_DMSO_200M_050219_2,17174,IAFFTTASV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17175 90.999 369.0 335990.0 25 0 12302.0 + 38787 TVEEKESIKLL 11 137 644.8717562790855 1287.728959624971 2 644.8716308474541 MULTI CID FTMS 0 0 0 17167 273639.5625 0.1661419446088404 -2 0.2153167724609375 8 Unmodified _TVEEKESIKLL_ REV__ENSG00000176619|ENST00000325327|LMNB2 45.739877483867886 0.1412225664835785 4 {[DS]|[MA]|[CV]|TT}VED{I|L}GSK{I|L}{I|L}{I|L} 12 -1 + 94.296 0.0 0.0 7.3226 7.3226 78.283 0.0 0.0 0.0 0.9074314547119116 10.189549981487076 0.9074314547119116 0.9074314547119116 0 3.829689690656103 0.0 3.31799276139487 0.0 {[DS]|[MA]|[CV]|TT}VED{I|L}GSK{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}TED{I|L}GSK{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}TTD{I|L}GSK{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}ETD{I|L}GSK{I|L}{I|L}{I|L};[{I|L}T]SED{I|L}GSK{I|L}{I|L}{I|L};[VG]HHD{I|L}GSK{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}DTT{I|L}GSK{I|L}{I|L}{I|L};[{I|L}T]DTD{I|L}GSK{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}TDT{I|L}GSK{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}EDT{I|L}GSK{I|L}{I|L}{I|L} 7.3226;7.2522;6.666;6.6123;6.3051;6.0613;5.9821;5.6652;5.6115;5.5579 -;-;-;-;-;-;-;-;-;- 8042 1 1.3 100982.3 1.0 12166 5007 17167 HBL1_DMSO_200M_050219_2,17175 HBL1_DMSO_200M_050219_2,17175,TVEEKESIKLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17176 91.005 326.0 307130.0 25 0 18486.0 -1 0 89 782.3612123948951 2344.0618077848853 3 783.0300781130791 MULTI CID FTMS 0 0 0 17167 235449.4375 0.6092641296989155 -1 0.0988388061523437 9 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 62.317 0.0 0.0 2.6585 0.0 0.0 0.0 1303.4499578257416 1303.4499578257416 47.255631547766654 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.6585 - 425 1 1.3 81281.1 1.0 12167 5007 17167 HBL1_DMSO_200M_050219_2,17176 HBL1_DMSO_200M_050219_2,17176, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17177 91.019 800.0 102940.0 25 0 3380.3 -1 0 120 1062.984177130973 2123.953801328746 2 1063.486987292767 MULTI CID FTMS 0 0 0 17167 175817.21875 0.4874859156223172 2 -0.2242889404296875 10 4 {[TV]|[{I|L}S]}AADTA{I|L}Y 9 -1 81.984 0.0 0.0 3.86 0.0 0.0 0.0 1215.477702045796 1215.477702045796 39.63615337528019 0.0 0.0 0.0 0 1.3494850021680094 1.6989700043360187 3.059894379144197 0.0 {[TV]|[{I|L}S]}AADTA{I|L}Y 3.86 - 12770 1 1.3 56330.8 0.7200000286102295 12168 5007 17167 HBL1_DMSO_200M_050219_2,17177 HBL1_DMSO_200M_050219_2,17177, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17178 91.024 286.0 244580.0 25 0 24249.0 + 35948 SVPIVTTDRR 10 91 572.3252247868007 1142.6358966404014 2 572.8270751833916 MULTI CID FTMS 0 0 0 17167 159567.59375 0.605432689736797 -1 0.0988388061523437 11 Unmodified _SVPIVTTDRR_ REV__ENSG00000127241|ENST00000296280|MASP1;REV__nc|ENSG00000127241|P48740-4|MASP1 14.838274106304384 0.5985701837916485 4 [VP]S{I|L}VSN{I|L} 8 -1 40.187 0.0 0.0 3.517 0.0 0.0 0.0 330.1431922861779 330.1431922861779 26.692154244230224 0.0 0.0 0.0 0 0.0 0.8239087409443188 2.004432191740108 0.0 [VP]S{I|L}VSN{I|L} 3.517 - 949 1 1.3 60385.8 1.0 12169 5007 17167 HBL1_DMSO_200M_050219_2,17178 HBL1_DMSO_200M_050219_2,17178,SVPIVTTDRR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17179 91.033 506.0 155140.0 25 0 16158.0 + 32045 RVLDFDPMAV 10 118 581.7991435451961 1161.583734157192 2 581.7993652224541 MULTI CID FTMS 0 0 0 17167 156978.671875 0.32623827787211 2 -0.2242889404296875 12 Unmodified _RVLDFDPMAV_ ENSG00000140451|ENST00000559239|PIF1;nc|ENSG00000140451|Q9H611-3|PIF1;nc|ENSG00000140451|Q9H611-4|PIF1 39.92294525591503 0.1583807461695373 4 D{M(Oxidation (M))|F}DPMAV 7 3 58.933 0.0 0.0 5.0735 0.0 0.0 368.2530995099625 0.0 368.2530995099625 0.0 44.7074504521148 0.0 0.0 0 1.2614393726401687 0.0 0.4247425010840047 0.0 + D{M(Oxidation (M))|F}DPMAV 5.0735 + + 368 1 1.3 65435.7 1.0 12170 5007 17167 HBL1_DMSO_200M_050219_2,17179 HBL1_DMSO_200M_050219_2,17179,RVLDFDPMAV False True RVLDFDPMAV 91.033299 581.799365222454 8152117.5 17167.0 nc|ENSG00000140451|Q9H611-3|PIF1;;ENSG00000140451|ENST00000559239|PIF1;;nc|ENSG00000140451|Q9H611-4|PIF1 7.711899757385254 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17180 91.037 177.0 363650.0 25 0 35127.0 + 31064 RLINQVLEL 9 103 549.3375617096727 1096.6605704861454 2 549.3380004763603 MULTI CID FTMS 0 0 0 17167 148546.109375 1.0 0 0.0 13 Unmodified _RLINQVLEL_ ENSG00000153130|ENST00000608372|SCOC;nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC 29.081581746732265 0.1611639662936252 4 NQV{I|L}E{I|L} 6 3 46.191 0.0 0.0 4.2119 0.0 0.0 382.26985366035314 0.0 382.26985366035314 0.0 25.74539712336197 0.0 0.0 0 0.6549471895720985 0.0 0.0 0.0 + NQV{I|L}E{I|L} 4.2119 + + 213 1 1.3 53698.7 1.0 12171 5007 17167 HBL1_DMSO_200M_050219_2,17180 HBL1_DMSO_200M_050219_2,17180,RLINQVLEL False True RLINQVLEL 91.036753 549.33800047636 1380519.75 17167.0 ENSG00000153130|ENST00000608372|SCOC;;nc|ENSG00000153130|Q9UIL1|SCOC;;nc|ENSG00000153130|Q9UIL1-2|SCOC;;nc|ENSG00000153130|Q9UIL1-3|SCOC 4.682915528615316 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17181 91.052 800.0 255470.0 25 0 26084.0 + 45111 YPYPYPHTLYL 11 155 713.8555883491424 1425.6966237650847 2 714.3586303591728 MULTI CID FTMS 0 0 0 17167 139216.65625 0.3490512714276043 -3 0.3349609375 14 Unmodified _YPYPYPHTLYL_ ENSG00000116221|ENST00000360840|MRPL37 128.3654064809346 0.0504118075931058 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}Y{M(Oxidation (M))|F}{I|L}[Y{I|L}] 11 5 + 94.473 0.0 0.0 6.6265 6.6265 82.309 0.0 0.0 0.0 18.22219294733918 5.862435673934272 5.862435673934272 4.3312325961992 0 1.3494850021680094 1.6989700043360187 2.1549471895720984 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}Y{M(Oxidation (M))|F}{I|L}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YATY{I|L}{M(Oxidation (M))|F}{I|L}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}YYP[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}Y{I|L}{M(Oxidation (M))|F}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}YPY[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPHT{I|L}{M(Oxidation (M))|F}{I|L}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAYT{I|L}{M(Oxidation (M))|F}{I|L}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YATY{I|L}{I|L}{M(Oxidation (M))|F}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YATY{I|L}YP[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YPYPHT{I|L}[Y{I|L}] 6.6265;6.3227;5.8692;5.8692;5.8136;5.6611;5.658;5.5654;5.5654;5.5117 -;-;-;-;-;-;-;-;-;+ + 18032 1 1.3 144219.5 0.6200000047683716 12172 5007 17167 HBL1_DMSO_200M_050219_2,17181 HBL1_DMSO_200M_050219_2,17181,YPYPYPHTLYL True True YPYPYPHTLYL 91.051759 713.8576 21662266.5 17167.0 ENSG00000116221|ENST00000360840|MRPL37 6.450163682301839 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17182 91.066 800.0 170700.0 25 0 13335.0 + 9197 FGGVLILIHR 10 163 375.5693297980315 1123.6861599942945 3 375.5691100955009 MULTI CID FTMS 0 0 0 17167 121526.640625 0.0042461340393042 21 -2.352973937988281 15 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 24.020572477871973 0.4289996903560794 4 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 81.565 0.0 0.0 7.2587 7.2587 90.114 0.0 0.0 0.0 69.99619523775135 17.587418566968154 17.587418566968154 9.208187539523747 0 0.7302046884880937 2.0 0.0 0.566901560044258 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 7.2587;6.4392 -;- 365 + 1 1.3 113341.3 0.8600000143051147 12173 5007 17167 HBL1_DMSO_200M_050219_2,17182 HBL1_DMSO_200M_050219_2,17182,FGGVLILIHR False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17183 91.079 800.0 133870.0 25 0 17653.0 + -1 LPSITNVI 8 118 855.7183769138832 2564.1333013418493 3 856.3859130740166 MULTI CID FTMS 0 0 0 17167 117542.296875 0.937465044638184 1 -0.1451568603515625 16 nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 4 [{I|L}P]S{I|L}TNV{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}NA 12 -1 64.553 0.0 0.0 2.5175 0.0 0.0 0.0 1295.4513915120244 1295.4513915120244 49.24288105545884 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.774227503252014 0.7302046884880937 [{I|L}P]S{I|L}TNV{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}NA 2.5175 - 5466 1 1.3 81685.1 0.6100000143051147 12174 5007 17167 HBL1_DMSO_200M_050219_2,17183 HBL1_DMSO_200M_050219_2,17183, False False LPSITNVI 91.079423 856.385913074017 3831302.5 17167.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 2.2811845938364663 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17184 91.085 216.0 367800.0 25 0 47205.0 + -1 TLLNVIKSV 9 118 494.2227777013191 986.431002469438 2 494.2223693728447 MULTI CID FTMS 0 0 0 17167 119091.265625 1.0 0 0.0 17 2 Carbamidomethyl (C) _TLHC(Carbamidomethyl (C))PTC(Carbamidomethyl (C))V_ nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;ENST00000538984.1_1_12:26564247-26572125:-|nuORF;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;ENSG00000150995|ENST00000649015|ITPR1;ENSG00000123104|ENST00000381340|ITPR2;ENST00000493491.5_1_3:4841632-4887906:+|nuORF 10.183394434864962 0.7604730176254005 4 {I|L}NVSVK{I|L} 7 -1 28.54 0.0 0.0 2.8933 0.0 0.0 214.9462135063506 0.0 214.9462135063506 0.0 13.926222739823755 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.2059771852360797 {I|L}NVSVK{I|L} 2.8933 - 585 + 1 1.3 62776.9 1.0 12175 5007 17167 HBL1_DMSO_200M_050219_2,17184 HBL1_DMSO_200M_050219_2,17184,TLHCPTCV False False TLLNVIKSV 91.08468 494.222369372845 1483304.625 17167.0 nc|ENSG00000150995|Q14643-3|ITPR1;;nc|ENSG00000150995|Q14643-4|ITPR1;;nc|ENSG00000150995|Q14643-2|ITPR1;;nc|ENSG00000150995|Q14643-6|ITPR1;;nc|ENSG00000150995|Q14643-7|ITPR1;;ENST00000538984.1_1_12:26564247-26572125:-|nuORF;;nc|ENSG00000150995|Q14643-5|ITPR1;;nc|ENSG00000150995|Q14643-8|ITPR1;;ENSG00000150995|ENST00000649015|ITPR1;;ENSG00000123104|ENST00000381340|ITPR2;;ENST00000493491.5_1_3:4841632-4887906:+|nuORF 5.6381791432698565 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17185 91.099 800.0 97277.0 25 0 6812.9 -1 0 97 637.0512737088841 2544.175988969136 4 637.3029662966728 MULTI CID FTMS 0 0 0 17167 117012.0859375 1.0 0 0.0 18 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 53.136 0.0 0.0 2.0885 0.0 0.0 0.0 1602.6313761812446 1602.6313761812446 19.38802092470482 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 2.0885 - 1209 1 1.3 68686.8 0.5199999809265137 12176 5007 17167 HBL1_DMSO_200M_050219_2,17185 HBL1_DMSO_200M_050219_2,17185, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17186 91.109 626.0 176000.0 25 0 20668.0 + 1696 ALPKELPLI 9 142 497.3207620859955 992.626971238791 2 497.3213073611259 MULTI CID FTMS 0 0 0 17167 108065.078125 0.6502668747796964 1 -0.1451568603515625 19 Unmodified _ALPKELPLI_ ENSG00000105556|ENST00000264819|MIER2 21.74664581756881 0.2544899275067181 4 [{I|L}P]KE{I|L}A 6 4 30.718 0.0 0.0 3.0946 0.0 0.0 0.0 338.2071234378099 338.2071234378099 3.794482255454525 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.0 0.3494850021680094 [{I|L}P]KE{I|L}A 3.0946 - 630 1 1.3 87649.9 1.0 12177 5007 17167 HBL1_DMSO_200M_050219_2,17186 HBL1_DMSO_200M_050219_2,17186,ALPKELPLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17187 91.123 800.0 119780.0 25 0 7151.7 -1 0 97 1092.5260276991448 2183.03750246509 2 1093.523974597454 MULTI CID FTMS 0 0 0 17167 108634.3046875 1.0 0 0.0 20 4 {[HG]|PP}YPPPPP{I|L}H 10 -1 34.447 0.0 0.0 1.5779 0.0 0.0 0.0 1087.4419698098604 1087.4419698098604 14.0015389967109 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}YPPPPP{I|L}H 1.5779 - 2162 1 1.3 64421.7 0.4600000083446502 12178 5007 17167 HBL1_DMSO_200M_050219_2,17187 HBL1_DMSO_200M_050219_2,17187, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17189 91.131 192.0 256220.0 25 0 25986.0 + 42628 VTTSAAVVIT 10 79 481.2818260360833 960.5490991389668 2 481.2821838259697 MULTI CID FTMS 0 0 0 17188 227189.390625 0.0548133543159419 3 -0.3212051391601562 1 Unmodified _VTTSAAVVIT_ REV__ENSG00000086758|ENST00000262854|HUWE1;REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;REV__nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 25.399314129420983 0.3980215340001851 4 [{I|L}T]SV 4 -1 23.249 0.0 0.0 2.4204 0.0 0.0 0.0 557.2912310571885 557.2912310571885 2.917427049434739 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5 0.0 [{I|L}T]SV 2.4204 - 151 1 1.311 44012.4 1.0 12179 5008 17188 HBL1_DMSO_200M_050219_2,17189 HBL1_DMSO_200M_050219_2,17189,VTTSAAVVIT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17190 91.133 96.0 691630.0 25 0 104800.0 -1 LMYSCMDL 8 102 516.7128926364896 1031.4112323397792 2 516.7138549685478 MULTI CID FTMS 0 0 0 17188 318882.78125 0.3393437456955376 2 -0.2127532958984375 2 Carbamidomethyl (C) _LMYSC(Carbamidomethyl (C))MDL_ ENST00000280200.8_3_18:67531437-67531521:-|nuORF 11.114462752807354 0.7467182956244686 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y 3 -1 23.301 0.0 0.0 2.2591 0.0 0.0 0.0 621.1994152833917 621.1994152833917 1.0604445616360003 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y 2.2591 + + 223 1 1.311 57653.8 1.0 12180 5008 17188 HBL1_DMSO_200M_050219_2,17190 HBL1_DMSO_200M_050219_2,17190,LMYSCMDL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17191 91.135 96.0 639090.0 25 0 91546.0 + 33382 SGLLKVWQV 9 93 515.3080373879011 1028.601521842602 2 515.3084594607353 MULTI CID FTMS 0 0 0 17188 522548.78125 0.7035219852816071 -1 0.1451568603515625 3 Unmodified _SGLLKVWQV_ ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF 75.76082778847304 0.0188720312721366 4 [SG]{I|L}{I|L}KVWQV 9 0 + 51.384 0.0 0.0 4.9955 4.9955 77.501 0.0 0.0 0.0 5.985994592184554 7.504311474114331 5.985994592184554 5.985994592184554 0 1.873712505420024 0.7958800173440752 0.3807196863200844 0.0 + + [SG]{I|L}{I|L}KVWQV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KVWQV;[SG]{I|L}{I|L}RD{I|L}[KQ];[SG]{I|L}{I|L}RQK{NN|[MP]|[D{I|L}]|[EV]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KV{[DA]|[EG]}QV;[K{I|L}]EKVWQV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}RD{I|L}[KQ];{I|L}{I|L}[SG]KVWQV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}RQK{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}KKVWQV 4.9955;4.4135;3.874;3.5813;3.5131;3.4153;3.292;3.1174;2.9994;2.8863 +;-;-;-;-;-;-;-;-;- + 799 1 1.311 51718.3 1.0 12181 5008 17188 HBL1_DMSO_200M_050219_2,17191 HBL1_DMSO_200M_050219_2,17191,SGLLKVWQV True True SGLLKVWQV 91.135069 515.308459460735 11515731.0 17188.0 ENST00000489767.5_1_2:219130391-219134818:-|nuORF;;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;;ENSG00000127837|ENST00000248450|AAMP 7.340669631958008 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17192 91.137 101.0 798780.0 25 0 80477.0 + 21291 LPEEYLSAI 9 89 517.773343441581 1033.532133949962 2 517.7742797732353 MULTI CID FTMS 0 0 0 17188 428154.15625 0.9257607343093566 -1 0.1451568603515625 4 Unmodified _LPEEYLSAI_ ENSG00000066777|ENST00000262215|ARFGEF1 23.1484247019978 0.2366544122328345 4 [EP]E{I|L}SA 6 3 28.695 0.0 0.0 2.7764 0.0 0.0 0.0 404.2182661123245 404.2182661123245 9.653500133247736 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.4247425010840047 0.0 [EP]E{I|L}SA 2.7764 - 149 1 1.311 69551.2 1.0 12182 5008 17188 HBL1_DMSO_200M_050219_2,17192 HBL1_DMSO_200M_050219_2,17192,LPEEYLSAI False True LPEEYLSAI 91.137246 517.774279773235 5727186.5 17188.0 ENSG00000066777|ENST00000262215|ARFGEF1 1.784880628188451 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17193 91.14 115.0 468090.0 25 0 44549.0 + 17207 KLLEIDIDGV 10 84 557.8212021324495 1113.6278513316988 2 557.8218871951103 MULTI CID FTMS 0 0 0 17188 397370.28125 1.0 0 0.0 5 Unmodified _KLLEIDIDGV_ ENSG00000101868|ENST00000379068|POLA1;nc|ENSG00000101868|P09884|POLA1 57.24910588100465 0.0438022649904578 4 {I|L}{I|L}KE{I|L}D{I|L}DGV 10 2 + 85.922 0.0 0.0 7.7155 7.7155 86.104 0.0 0.0 0.0 13.309932190414244 16.53212513775344 13.309932190414244 4.771212547196626 0 0.75 1.0969100130080565 1.174742501084005 0.0 {I|L}{I|L}KE{I|L}D{I|L}DGV;{I|L}{I|L}EK{I|L}D{I|L}DGV;[K{I|L}]{I|L}E{I|L}D{I|L}DGV;{[QN]|[E{I|L}]|[KN]}{I|L}K{I|L}D{I|L}DGV;{I|L}{I|L}ED{I|L}K{I|L}DGV;{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}{I|L}K{I|L}DGV;{[QN]|[E{I|L}]|[KN]}{I|L}D{I|L}K{I|L}DGV;[VG]DRRK{I|L}DGV;{I|L}{I|L}KE{I|L}D[DG]{I|L}V;[VG][WQ]{I|L}K{I|L}DR 7.7155;7.2871;6.5203;6.4333;6.2963;6.0242;5.4425;5.2592;4.9769;4.5615 -;-;+;-;-;-;-;-;-;- + 627 1 1.311 46350.9 1.0 12183 5008 17188 HBL1_DMSO_200M_050219_2,17193 HBL1_DMSO_200M_050219_2,17193,KLLEIDIDGV True True KLLEIDIDGV 91.139667 557.82188719511 3149829.75 17188.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1 7.297818183898926 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17194 91.143 164.0 499900.0 25 0 87261.0 + -1 MLCEPAYWFV 10 99 666.2930912289509 1330.5716295247016 2 666.2936889529228 MULTI CID FTMS 0 0 0 17188 390055.34375 0.91080971900399 -1 0.1451568603515625 6 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LC(Carbamidomethyl (C))EPAYWFV_ REV__ENSG00000162434|ENST00000342505|JAK1 11.640296217721598 0.652229146672156 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L} 7 -1 56.392 0.0 0.0 4.2382 0.0 0.0 0.0 483.1352509164821 483.1352509164821 36.4435694977913 0.0 0.0 0.0 0 0.8807196863200843 1.2218487496163564 0.0 1.1421590589602533 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L} 4.2382 - 159 1 1.311 66003.0 1.0 12184 5008 17188 HBL1_DMSO_200M_050219_2,17194 HBL1_DMSO_200M_050219_2,17194,MLCEPAYWFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17195 91.146 127.0 537070.0 25 0 58286.0 + -1 QPMFMKLL 8 105 512.2731215773543 1022.5316902215088 2 512.2740356326103 MULTI CID FTMS 0 0 0 17188 339320.6875 0.7786676040858338 -1 0.1451568603515625 7 Oxidation (M) _QPM(Oxidation (M))FMKLL_ REV__ENST00000346329.7_1_11:70281328-70281493:+|nuORF 16.942295170755138 0.6606234159769251 4 {I|L}{I|L}MK{I|L}{I|L} 6 -1 35.187 0.0 0.0 3.4412 0.0 0.0 293.05294373888984 0.0 293.05294373888984 0.0 11.743654027429288 0.0 0.0 0 1.6549471895720984 0.0 0.0 0.0 {I|L}{I|L}MK{I|L}{I|L} 3.4412 - 176 + 1 1.311 60374.7 1.0 12185 5008 17188 HBL1_DMSO_200M_050219_2,17195 HBL1_DMSO_200M_050219_2,17195,QPMFMKLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17196 91.159 800.0 224290.0 25 0 7517.9 -1 0 148 1164.538671535127 3490.594185205581 3 1165.208178699017 MULTI CID FTMS 0 0 0 17188 280910.21875 0.2642394508835508 -2 0.2439956665039062 8 4 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQAED 14 -1 89.957 0.0 0.0 2.5771 0.0 0.0 1485.7424060801914 333.1315096490844 1818.873915729276 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 1.9049471895720984 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQAED 2.5771 - 112335 + 1 1.311 107013.1 0.8199999928474426 12186 5008 17188 HBL1_DMSO_200M_050219_2,17196 HBL1_DMSO_200M_050219_2,17196, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17197 91.165 283.0 514700.0 25 0 89942.0 + 44404 YLYDRLLRI 9 64 408.90835353552416 1223.7032312067724 3 408.9083434939384 MULTI CID FTMS 0 0 0 17188 254590.09375 0.6765651555221157 -1 0.1451568603515625 9 Unmodified _YLYDRLLRI_ ENSG00000101003|ENST00000262460|GINS1 43.9818466556824 0.0535980856389242 4 Y{I|L}YD{I|L}R{I|L}{I|L}R 9 2 + 85.883 0.0 0.0 7.0183 7.0183 80.184 0.0 0.0 0.0 36.47817481888637 2.340832060333682 2.340832060333682 2.340832060333682 0 0.4247425010840047 2.0 0.0 1.274227503252014 Y{I|L}YD{I|L}R{I|L}{I|L}R;Y{I|L}YD{I|L}R{I|L}R{I|L};Y{I|L}YDR{I|L}{I|L}{I|L}R;Y{I|L}YDR{I|L}{I|L}R{I|L};Y{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}R{I|L}{I|L}R;Y{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}R{I|L}R{I|L};Y{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[VG]{I|L}{I|L}R;Y{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[VG]{I|L}R{I|L};[RH]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}R{I|L}{I|L}R;[RH]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}R{I|L}R{I|L} 7.0183;6.827;6.7723;6.581;5.2838;5.0925;4.5313;4.34;1.77;1.5788 -;-;-;+;-;-;-;-;-;- + 200 + 1 1.311 117691.5 1.0 12187 5008 17188 HBL1_DMSO_200M_050219_2,17197 HBL1_DMSO_200M_050219_2,17197,YLYDRLLRI True True YLYDRLLRI 91.164579 408.908343493938 6213591.0 17188.0 ENSG00000101003|ENST00000262460|GINS1 3.4955422083536782 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17198 91.169 209.0 166680.0 25 0 31854.0 + 44443 YMIGSEVGNYL 11 53 623.2940470588727 1244.573541184545 2 623.2952758669853 MULTI CID FTMS 0 0 0 17188 238253.9375 0.5972546169353354 1 -0.079132080078125 10 Unmodified _YMIGSEVGNYL_ ENSG00000099956|ENST00000644036|SMARCB1;nc|ENSG00000099956|Q12824-2|SMARCB1 10.073929032068715 0.8255972128077141 4 {I|L} 1 10 13.979 0.0 0.0 1.1232 0.0 0.0 1113.478721093528 0.0 1113.478721093528 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1232 + + 32 + 1 1.311 33404.0 1.0 12188 5008 17188 HBL1_DMSO_200M_050219_2,17198 HBL1_DMSO_200M_050219_2,17198,YMIGSEVGNYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17199 91.171 134.0 483750.0 25 0 46146.0 + 138 AALEELVKL 9 104 493.2997234041935 984.584893875187 2 493.3001586794853 MULTI CID FTMS 0 0 0 17188 183945.96875 1.0 0 0.0 11 Unmodified _AALEELVKL_ ENSG00000170445|ENST00000504156|HARS1;ENST00000506579.5_1_5:140058520-140070889:-|nuORF;ENST00000518126.5_1_5:140059363-140070889:-|nuORF;nc|ENSG00000170445|P12081-2|HARS1;nc|ENSG00000170445|P12081-3|HARS1;nc|ENSG00000170445|P12081-4|HARS1 34.40172386719151 0.1061884637610825 4 AA{I|L}ANVSVK{I|L} 10 4 + 66.393 0.0 0.0 6.7433 6.7433 83.709 0.0 0.0 0.0 22.498774732166 5.096291464754955 5.096291464754955 5.096291464754955 0 0.3252574989159953 1.5228787452803376 0.4247425010840047 0.0 AA{I|L}ANVSVK{I|L};AA{I|L}ANV{I|L}KSV;AAA{I|L}NVSVK{I|L};AA{I|L}AGGVSVK{I|L};AA{I|L}EE{I|L}VK{I|L};AAA{I|L}NV{I|L}KSV;AA{I|L}AGGV{I|L}KSV;AA{I|L}ANVS[K{I|L}]V;AAA{I|L}GGVSVK{I|L};AAA{I|L}GGV{I|L}KSV 6.7433;6.2257;6.0061;5.8125;5.7741;5.4885;5.2949;5.0857;5.0753;4.5577 -;-;-;-;+;-;-;-;-;- + 650 + 1 1.311 52909.3 1.0 12189 5008 17188 HBL1_DMSO_200M_050219_2,17199 HBL1_DMSO_200M_050219_2,17199,AALEELVKL True True AALEELVKL 91.171287 493.300158679485 1568051.25 17188.0 nc|ENSG00000170445|P12081-3|HARS1;;nc|ENSG00000170445|P12081-2|HARS1;;ENST00000506579.5_1_5:140058520-140070889:-|nuORF;;nc|ENSG00000170445|P12081-4|HARS1;;ENST00000518126.5_1_5:140059363-140070889:-|nuORF;;ENSG00000170445|ENST00000504156|HARS1 6.47948424021403 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17200 91.185 772.0 159000.0 25 0 21844.0 18705 LAIWEASL 8 141 451.75274496202985 901.4909369908596 2 451.7528564333916 MULTI CID FTMS 0 0 0 17188 152810.0 0.0117659985356602 93 -7.535751342773437 12 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 42.96799951952854 0.1846367511955703 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 5 + 56.053 0.0 0.0 6.2178 6.2178 76.079 0.0 0.0 0.0 5.950528104279016 8.384767769392738 5.950528104279016 1.7609125905568137 0 0.7742275032520141 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};[{I|L}A]SMPS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};[{I|L}A]{I|L}[PG][MT]S{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[{I|L}A]P{[VA]|[{I|L}G]}[MT]S{I|L};[{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{I|L}[PG][MT]TV;[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L} 6.2178;6.0225;5.8273;5.5578;5.4219;5.1071;4.9507;4.8937;4.6154;4.4151 -;-;-;-;-;-;-;-;-;- 742 1 1.311 96803.7 1.0 12190 5008 17188 HBL1_DMSO_200M_050219_2,17200 HBL1_DMSO_200M_050219_2,17200,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17201 91.189 137.0 437900.0 25 0 52818.0 39867 VFIYLYNI 8 98 522.7897524932204 1043.5649520532406 2 522.7903930544853 MULTI CID FTMS 0 0 0 17188 112910.4765625 0.3217380407732715 -3 0.3604736328125 13 Unmodified _VFIYLYNI_ ENST00000373886.7_1_10:60588703-60588985:+|nuORF 20.871210003555333 0.6025813472596342 4 {NN|[MP]|[D{I|L}]|[EV]}N{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PV 9 7 + 19.333 0.0 0.0 1.8526 1.8526 70.836 0.0 0.0 0.0 4.896067459829675 0.0889361288639563 0.0889361288639563 7.166987712964504 0 0.25 0.744727494896694 0.0 0.2887254899964357 {NN|[MP]|[D{I|L}]|[EV]}N{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PV;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}V[R{M(Oxidation (M))|F}][PA];{NN|[MP]|[D{I|L}]|[EV]}GG{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PV;[KA][{I|L}V]W[{I|L}A]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}GG{I|L}V[R{M(Oxidation (M))|F}][PA] 1.8526;1.1658;0.97022;0.30433;0.28344 -;-;-;-;- 206 + 1 1.311 57591.6 1.0 12191 5008 17188 HBL1_DMSO_200M_050219_2,17201 HBL1_DMSO_200M_050219_2,17201,VFIYLYNI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17202 91.202 800.0 60034.0 25 0 10692.0 -1 0 76 1109.502977845278 2216.9914027573564 2 1110.000659167767 MULTI CID FTMS 0 0 0 17188 94593.015625 0.8241133854872016 1 -0.079132080078125 14 4 {[QV]|[N{I|L}]|[RA]|[KV]}MDNVQY{M(Oxidation (M))|F}[PS]EQAE 15 -1 60.447 0.0 0.0 2.7265 0.0 0.0 0.0 448.1571749322876 448.1571749322876 39.20486885197654 0.0 0.0 0.0 0 0.6435078169319297 1.0969100130080565 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}MDNVQY{M(Oxidation (M))|F}[PS]EQAE 2.7265 - 1463 + 1 1.311 38511.4 0.4399999976158142 12192 5008 17188 HBL1_DMSO_200M_050219_2,17202 HBL1_DMSO_200M_050219_2,17202, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17204 91.207 19.0 2483000.0 25 0 427930.0 + 35756 SVIEQIVYV 9 67 525.297477774159 1048.580402615118 2 525.2981445193291 MULTI CID FTMS 0 0 0 17203 2557582.25 0.5629097127359977 2 -0.2420730590820312 1 Unmodified _SVIEQIVYV_ ENSG00000077150|ENST00000661543|NFKB2;nc|ENSG00000077150|Q00653-4|NFKB2 39.957323273325 0.0756908302845263 4 [VS][PS]VS{I|L} 7 6 39.186 0.0 0.0 3.737 0.0 0.0 0.0 376.190809606384 376.190809606384 20.76946945126394 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.274227503252014 0.0 [VS][PS]VS{I|L} 3.737 - 342 1 1.311 44329.7 1.0 12193 5009 17203 HBL1_DMSO_200M_050219_2,17204 HBL1_DMSO_200M_050219_2,17204,SVIEQIVYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17205 91.209 48.0 1461800.0 25 0 317330.0 + 41 AAAPQLLIV 9 82 448.2840871053542 894.5536212775085 2 448.2844726443291 MULTI CID FTMS 0 0 0 17203 1370536.375 1.0 0 0.0 2 Unmodified _AAAPQLLIV_ ENSG00000130303|ENST00000252593|BST2;nc|ENSG00000130303|Q10589-2|BST2 38.15118350030904 0.0856056900103839 4 AA[VP]{I|L}AAA{I|L}V 10 5 + 44.085 0.0 0.0 4.9282 4.9282 68.9 0.0 0.0 0.0 0.7918124604762511 10.452490459521968 0.7918124604762511 0.7918124604762511 0 0.7429928190999391 1.3010299956639813 0.0 0.0 AA[VP]{I|L}AAA{I|L}V;[QP]{I|L}{I|L}AAA{I|L}V;[PA]G{I|L}{I|L}AAA{I|L}V;[QP]{I|L}AAA{I|L}{I|L}V;AA[VP]A{I|L}AA{I|L}V;[QP]{I|L}A{I|L}AA{I|L}V;AA[VP]AAA{I|L}{I|L}V;[PA]G{I|L}A{I|L}AA{I|L}V;[PA]G{I|L}AAA{I|L}{I|L}V;{[VA]|[{I|L}G]}[PA]{I|L}AAA{I|L}V 4.9282;4.8397;4.7885;4.4902;4.3948;4.3063;4.2865;4.2552;4.1468;4.1468 -;-;-;-;-;-;-;-;-;- 583 1 1.311 60499.4 1.0 12194 5009 17203 HBL1_DMSO_200M_050219_2,17205 HBL1_DMSO_200M_050219_2,17205,AAAPQLLIV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17206 91.21 79.0 839950.0 25 0 99560.0 + 22391 LPSSVLHII 9 85 489.8026421894774 977.5907314457548 2 489.8030578494072 MULTI CID FTMS 0 0 0 17203 488935.53125 0.3288149709558916 2 -0.2420730590820312 3 Unmodified _LPSSVLHII_ ENSG00000000460|ENST00000359326|C1orf112 48.345845343767074 0.0439967357579942 4 {I|L}PSSV{I|L}H{I|L}{I|L} 9 0 + 57.647 0.0 0.0 5.8968 5.8968 88.756 0.0 0.0 0.0 34.67084689121528 8.741436528314566 8.741436528314566 19.22508200162774 0 1.579689690656103 2.0 0.0 0.0 + + {I|L}PSSV{I|L}H{I|L}{I|L};[{I|L}P]KV{I|L}V[Y{M(Oxidation (M))|F}];{I|L}[RD]V{I|L}H{I|L}{I|L} 5.8968;3.9302;2.2476 +;-;- + 360 + 1 1.311 58575.0 1.0 12195 5009 17203 HBL1_DMSO_200M_050219_2,17206 HBL1_DMSO_200M_050219_2,17206,LPSSVLHII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17207 91.214 172.0 341650.0 25 0 50819.0 + 26532 NVIDNLIVA 9 90 485.7819795896355 969.549406246071 2 485.7822753787041 MULTI CID FTMS 0 0 0 17203 293561.6875 0.0035184116466666 13 -1.4320297241210938 4 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 32.78568957990786 0.1150597335874693 4 {[QV]|[N{I|L}]|[RA]|[KV]}DVN{I|L}{I|L}{[VA]|[{I|L}G]} 9 2 + 42.915 0.0 0.0 4.4262 4.4262 68.836 0.0 0.0 0.0 1.7609125905568137 7.147642715192504 1.7609125905568137 1.7609125905568137 0 0.0 0.8538719643217619 0.0 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}DVN{I|L}{I|L}{[VA]|[{I|L}G]};[{I|L}V]NDN{I|L}{I|L}{[VA]|[{I|L}G]};{[QV]|[N{I|L}]|[RA]|[KV]}VDN{I|L}{I|L}{[VA]|[{I|L}G]};{[NV]|[RG]}EVN{I|L}{I|L}{[VA]|[{I|L}G]};{[NV]|[RG]}{I|L}DN{I|L}{I|L}{[VA]|[{I|L}G]};{[QV]|[N{I|L}]|[RA]|[KV]}DVGG{I|L}{I|L}{[VA]|[{I|L}G]};[{I|L}V]NDGG{I|L}{I|L}{[VA]|[{I|L}G]};[{I|L}V]GGDN{I|L}{I|L}{[VA]|[{I|L}G]};{[QV]|[N{I|L}]|[RA]|[KV]}VDGG{I|L}{I|L}{[VA]|[{I|L}G]};{[NV]|[RG]}EVGG{I|L}{I|L}{[VA]|[{I|L}G]} 4.4262;4.2446;4.1158;3.856;3.5455;3.4765;3.2949;3.2949;3.166;2.9063 -;-;-;-;+;-;-;-;-;- + 336 1 1.311 49249.9 1.0 12196 5009 17203 HBL1_DMSO_200M_050219_2,17207 HBL1_DMSO_200M_050219_2,17207,NVIDNLIVA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17208 91.218 209.0 365560.0 25 0 47606.0 + 14018 IAFHTIPVI 9 111 505.8055883388616 0 505.8069640994072 PEAK CID FTMS 0 0 0 17203 246311.21875 0.4040365211546667 2 -0.2420730590820312 5 Unmodified _IAFHTIPVI_ ENSG00000042445|ENST00000295802|RETSAT;nc|ENSG00000042445|Q6NUM9-2|RETSAT 38.15118350030904 0.0708063914493946 4 {I|L}T 2 7 22.959 0.0 0.0 2.2741 0.0 0.0 327.2151389784378 465.2262056940063 792.4413446724441 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9247425010840048 0.0 {I|L}T 2.2741 - 311 + 1 1.311 62811.4 1.0 12197 5009 17203 HBL1_DMSO_200M_050219_2,17208 HBL1_DMSO_200M_050219_2,17208,IAFHTIPVI True True IAFHTIPVI 91.2176 505.806964099407 6390222.0 17203.0 ENSG00000042445|ENST00000295802|RETSAT;;nc|ENSG00000042445|Q6NUM9-2|RETSAT 5.715628623962402 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17209 91.221 192.0 340360.0 25 0 40733.0 + -1 NMLPQIFRV 9 106 567.3081119579417 1132.6016709826831 2 567.3102294802666 MULTI CID FTMS 0 0 0 17203 209835.15625 0.7718095116803182 -2 0.2242889404296875 6 Oxidation (M) _NM(Oxidation (M))LPQIFRV_ ENST00000544258.1_3_12:4598975-4611546:-|nuORF;ENSG00000047621|ENST00000261250|C12orf4 36.12702656103203 0.0967173616627612 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}PQ{I|L}{M(Oxidation (M))|F}RV 9 -1 + 49.051 0.0 0.0 4.3308 4.3308 78.88 0.0 0.0 0.0 35.95229386281659 11.215686636715034 11.215686636715034 9.208187539523747 0 1.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}PQ{I|L}{M(Oxidation (M))|F}RV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}P[AG]{I|L}{M(Oxidation (M))|F}RV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}PQ{I|L}[RV]{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}P[AG]{I|L}[RV]{M(Oxidation (M))|F};[TP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}Q{I|L}{M(Oxidation (M))|F}RV;[TP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[AG]{I|L}{M(Oxidation (M))|F}RV;[TP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}Q{I|L}[RV]{M(Oxidation (M))|F} 4.3308;3.5178;3.0514;2.2384;2.0582;1.2452;0.77874 +;-;-;-;-;-;- + 158 + 1 1.311 53819.2 1.0 12198 5009 17203 HBL1_DMSO_200M_050219_2,17209 HBL1_DMSO_200M_050219_2,17209,NMLPQIFRV False False NMLPQIFRV 91.221298 567.310229480267 6257294.0 17203.0 ENST00000544258.1_3_12:4598975-4611546:-|nuORF;;ENSG00000047621|ENST00000261250|C12orf4 7.995309352874756 2.0 True 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17210 91.225 204.0 385350.0 25 0 55074.0 + 37635 TLLNVIKSV 9 103 493.816595197796 985.618637462392 2 493.8182556033134 MULTI CID FTMS 0 0 0 17203 193410.796875 1.0 0 0.0 7 Unmodified _TLLNVIKSV_ ENSG00000123104|ENST00000381340|ITPR2;ENSG00000150995|ENST00000649015|ITPR1;ENST00000493491.5_1_3:4841632-4887906:+|nuORF;ENST00000538984.1_1_12:26564247-26572125:-|nuORF;nc|ENSG00000150995|Q14643-2|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1 33.4449034751529 0.1114409586740657 4 [{I|L}T]{I|L}GGV{I|L}KSV 10 2 + 64.208 0.0 0.0 6.5145 6.5145 77.255 0.0 0.0 0.0 25.76483730104272 7.955454296510098 7.955454296510098 1.7609125905568137 0 0.6861818737241735 2.0 0.6022338482433752 0.0 [{I|L}T]{I|L}GGV{I|L}KSV;[{I|L}T]{I|L}GR{I|L}KSV;[{I|L}T]{I|L}NV{I|L}KSV;[{I|L}T]{I|L}GGV[VS]K{I|L};[{I|L}T]{I|L}GR[VS]K{I|L};[{I|L}T]{I|L}NV[VS]K{I|L};[{I|L}T]{I|L}[KC][PA]K{I|L};[RV]ER{I|L}KSV;[RV]WV{I|L}KSV;[RV]ER[VS]K{I|L} 6.5145;6.3358;6.1571;5.7073;5.5287;5.35;3.1015;2.913;2.7343;2.1058 -;-;+;-;-;-;-;-;-;- + 490 + 1 1.311 61458.6 1.0 12199 5009 17203 HBL1_DMSO_200M_050219_2,17210 HBL1_DMSO_200M_050219_2,17210,TLLNVIKSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17211 91.23 281.0 408010.0 25 0 63975.0 + 14967 ILPKILQDV 9 117 519.8310725632837 1037.6475921933672 2 519.8312866091728 MULTI CID FTMS 0 0 0 17203 185255.359375 0.5535813520198365 -1 0.079132080078125 8 Unmodified _ILPKILQDV_ ENSG00000120333|ENST00000476371|MRPS14 43.77239144664712 0.0547478964384323 4 {I|L}{I|L}PK{I|L}{I|L}QDV 9 0 + 52.122 0.0 0.0 5.0231 5.0231 79.619 0.0 0.0 0.0 30.17643376451123 5.434786189744905 5.434786189744905 7.95880017344075 0 0.9247425010840048 2.0 0.3818108876706969 0.3807196863200844 + + {I|L}{I|L}PK{I|L}{I|L}QDV;{I|L}{I|L}PK{I|L}{I|L}DN{I|L};{I|L}{I|L}PK{I|L}{I|L}[AG]DV;{I|L}{I|L}PK{I|L}{I|L}DGAV;{I|L}{I|L}PK{I|L}{I|L}DGG{I|L};{I|L}{I|L}PKQ[{I|L}V]{NN|[MP]|[D{I|L}]|[EV]};{I|L}{I|L}Q[KP][{I|L}V]{NN|[MP]|[D{I|L}]|[EV]};[{I|L}P]K{I|L}Q[{I|L}V]{NN|[MP]|[D{I|L}]|[EV]};[KP]{I|L}{I|L}Q[{I|L}V]{NN|[MP]|[D{I|L}]|[EV]};[{I|L}P]K{I|L}[AG][{I|L}V]{NN|[MP]|[D{I|L}]|[EV]} 5.0231;4.2561;4.1357;3.6759;3.5062;3.4561;2.2349;1.4603;1.3659;0.57289 +;-;-;-;-;-;-;-;-;- + 793 + 1 1.311 92352.3 1.0 12200 5009 17203 HBL1_DMSO_200M_050219_2,17211 HBL1_DMSO_200M_050219_2,17211,ILPKILQDV True True ILPKILQDV 91.23035 519.8333 2955927.0 17203.0 ENSG00000120333|ENST00000476371|MRPS14 2.2568607727686563 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17212 91.244 800.0 229060.0 25 0 15089.0 + 30807 RIIDSLFNTV 10 157 589.332663422293 1176.6507739113858 2 589.3324462771416 MULTI CID FTMS 0 0 0 17203 144934.1875 0.3739576940812626 -2 0.2242889404296875 9 Unmodified _RIIDSLFNTV_ ENSG00000109814|ENST00000316423|UGDH;nc|ENSG00000109814|O60701-2|UGDH;nc|ENSG00000109814|O60701-3|UGDH 76.82478488871298 0.0187167883027705 4 {[TV]|[{I|L}S]}D[R{I|L}]{I|L}{M(Oxidation (M))|F}NTV 10 4 + 90.473 0.0 0.0 7.689 7.689 79.54 0.0 0.0 0.0 1.1145322933883364 16.53212513775344 1.1145322933883364 1.1145322933883364 0 1.2059771852360797 1.0969100130080565 1.9749073637206087 0.7059771852360797 {[TV]|[{I|L}S]}D[R{I|L}]{I|L}{M(Oxidation (M))|F}NTV;{NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]{I|L}{M(Oxidation (M))|F}NTV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}NTV;{[QS]|[NT]}V{M(Oxidation (M))|F}K[RV]NTV;{[TV]|[{I|L}S]}D[R{I|L}]{I|L}{M(Oxidation (M))|F}GGTV;{[QN]|[E{I|L}]|[KN]}[RV]S{I|L}{M(Oxidation (M))|F}NTV;{NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]{I|L}{M(Oxidation (M))|F}GGTV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}GGTV;{[QS]|[NT]}[KA]{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}NTV;{[TV]|[{I|L}S]}E[RV]{I|L}{M(Oxidation (M))|F}NTV 7.689;7.5943;7.4538;7.0067;6.9101;6.8198;6.8154;6.6749;6.4955;6.495 -;-;-;-;-;-;-;-;-;- 1640 1 1.311 138144.8 0.6399999856948853 12201 5009 17203 HBL1_DMSO_200M_050219_2,17212 HBL1_DMSO_200M_050219_2,17212,RIIDSLFNTV True True RIIDSLFNTV 91.244181 589.332446277142 6686921.0 17203.0 nc|ENSG00000109814|O60701-3|UGDH;;nc|ENSG00000109814|O60701-2|UGDH;;ENSG00000109814|ENST00000316423|UGDH 6.528060436248779 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17213 91.252 423.0 300310.0 25 0 18073.0 + 35444 STLHLVLRL 9 125 351.2257507279637 1050.6554227840911 3 351.2264587283134 MULTI CID FTMS 0 0 0 17203 134305.15625 0.006629003211414 13 -1.4320297241210938 10 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 36.12702656103203 0.0967173616627612 4 {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}] 9 0 + 44.671 0.0 0.0 4.2517 4.2517 74.402 0.0 0.0 0.0 22.430535368039468 5.642492736872597 5.642492736872597 5.752574989159946 0 0.5796896906561032 0.0 0.0 0.0 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}];{[TV]|[{I|L}S]}TH{I|L}V{I|L}[R{I|L}];{[MG]|[TS]}{I|L}{I|L}HV{I|L}[R{I|L}];{[MG]|[TS]}{I|L}H{I|L}{I|L}V[R{I|L}];{[TV]|[{I|L}S]}T{I|L}HV{I|L}[R{I|L}];{[TV]|[{I|L}S]}TH{I|L}{I|L}V[R{I|L}];{[MG]|[TS]}{I|L}{I|L}H{I|L}V[R{I|L}];{[TV]|[{I|L}S]}T{I|L}H{I|L}V[R{I|L}] 4.2517;3.7042;3.6745;3.2246;3.1269;2.677;2.6473;2.0998 +;-;-;-;-;-;-;- + 203 + 1 1.311 104843.7 1.0 12202 5009 17203 HBL1_DMSO_200M_050219_2,17213 HBL1_DMSO_200M_050219_2,17213,STLHLVLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17214 91.266 800.0 84292.0 25 0 6097.1 -1 0 88 849.0656161553225 2544.175019066168 3 849.3983032107353 MULTI CID FTMS 0 0 0 17203 132941.828125 0.5675480607438093 2 -0.2420730590820312 11 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 50.812 0.0 0.0 1.9972 0.0 0.0 0.0 1503.5646424394674 1503.5646424394674 25.366837651091387 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9972 - 146 1 1.311 56377.4 0.6000000238418579 12203 5009 17203 HBL1_DMSO_200M_050219_2,17214 HBL1_DMSO_200M_050219_2,17214, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17215 91.276 626.0 206540.0 25 0 14064.0 + 33637 SISAHGPPRAN 11 157 553.7911702734275 0 553.7910644412041 PEAK CID FTMS 0 0 0 17203 121041.84375 0.3422770308471273 8 -0.9467086791992188 12 Unmodified _SISAHGPPRAN_ REV__ENST00000382159.7_1_19:2511592-2511901:-|nuORF 31.26834338654808 0.2152680502973705 4 PM{I|L} 3 -1 21.972 0.0 0.0 1.9874 0.0 0.0 359.1893522174849 402.17902551822505 761.3683777357099 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 PM{I|L} 1.9874 - 157 + 1 1.311 104906.3 1.0 12204 5009 17203 HBL1_DMSO_200M_050219_2,17215 HBL1_DMSO_200M_050219_2,17215,SISAHGPPRAN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17216 91.286 490.0 230520.0 25 0 25802.0 + 29339 QIRSKGHFLQ 10 110 607.3450551157179 0 607.3448974490166 PEAK CID FTMS 0 0 0 17203 110087.6875 0.980700939129234 -1 0.079132080078125 13 Unmodified _QIRSKGHFLQ_ REV__ENSG00000099937|ENST00000215727|SERPIND1 14.838274106304384 0.3381107837965078 4 Q{M(Oxidation (M))|F}D 3 -1 18.274 0.0 0.0 1.5069 0.0 0.0 737.4318877199138 82.06688104801015 819.4987687679239 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8352587893338912 0.0 Q{M(Oxidation (M))|F}D 1.5069 - 95 + 1 1.311 88075.0 1.0 12205 5009 17203 HBL1_DMSO_200M_050219_2,17216 HBL1_DMSO_200M_050219_2,17216,QIRSKGHFLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17217 91.295 483.0 222270.0 25 0 26239.0 + 2833 AVAEQIPLL 9 134 477.28902744326575 952.5635019533316 2 477.2870666384697 MULTI CID FTMS 0 0 0 17203 113298.640625 0.5704079395520176 -3 0.3231277465820312 14 Unmodified _AVAEQIPLL_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 34.10243960390752 0.1078313939113124 4 {[VA]|[{I|L}G]}AEQ{I|L} 6 3 26.392 0.0 0.0 2.7706 0.0 0.0 0.0 338.21357748803706 338.21357748803706 3.09131362978043 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {[VA]|[{I|L}G]}AEQ{I|L} 2.7706 + + 607 1 1.311 84610.4 1.0 12206 5009 17203 HBL1_DMSO_200M_050219_2,17217 HBL1_DMSO_200M_050219_2,17217,AVAEQIPLL True True AVAEQIPLL 91.294868 477.28706663847 1062218.875 17203.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 4.661676088968913 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17218 91.304 528.0 279630.0 25 0 43124.0 + 30792 RIFGETIDIAV 11 107 617.3462383864494 1232.677923839699 2 617.3463012576103 MULTI CID FTMS 0 0 0 17203 101873.625 0.5994086735237983 -1 0.079132080078125 15 Unmodified _RIFGETIDIAV_ ENSG00000092094|ENST00000206542|OSGEP;ENST00000555656.5_1_14:20917248-20917425:-|nuORF;ENST00000555785.2_1_14:20917121-20917425:-|nuORF 47.7319792270244 0.130190323903946 4 {NN|[MP]|[D{I|L}]|[EV]}Y[KP]S{I|L}D{I|L}AV 11 5 + 88.898 0.0 0.0 7.2118 7.2118 88.496 0.0 0.0 0.0 17.536122882990867 16.575773191777927 16.575773191777927 8.609795152539192 0 1.2134679910804405 1.5228787452803376 1.548455006504028 0.6109243748081782 {NN|[MP]|[D{I|L}]|[EV]}Y[KP]S{I|L}D{I|L}AV;{NN|[MP]|[D{I|L}]|[EV]}YRR{I|L}D{I|L}AV;[R{I|L}]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}S{I|L}D{I|L}AV;[{I|L}T]{[HG]|PP}[HA]S{I|L}D{I|L}AV;[R{I|L}][YR]D{I|L}D{I|L}AV;[{I|L}T]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PA]S{I|L}D{I|L}AV;[R{I|L}]{M(Oxidation (M))|F}[VS]T{I|L}D{I|L}AV;[R{I|L}]{M(Oxidation (M))|F}{[WT]|[RM]}{I|L}D{I|L}AV;[{I|L}A][YT][PA]S{I|L}D{I|L}AV;[{I|L}T]{[HG]|PP}{[HG]|PP}T{I|L}D{I|L}AV 7.2118;6.5133;5.7892;5.4799;5.4435;5.3371;5.1357;5.0907;5.0396;5.0133 -;-;-;-;-;-;-;-;-;- 999 1 1.311 110399.8 1.0 12207 5009 17203 HBL1_DMSO_200M_050219_2,17218 HBL1_DMSO_200M_050219_2,17218,RIFGETIDIAV False True RIFGETIDIAV 91.304166 617.34630125761 1489920.875 17203.0 ENSG00000092094|ENST00000206542|OSGEP;;ENST00000555656.5_1_14:20917248-20917425:-|nuORF;;ENST00000555785.2_1_14:20917121-20917425:-|nuORF 5.512663046518962 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17219 91.318 800.0 81372.0 25 0 7794.2 -1 IIMLEALERV 10 102 601.8443357399868 1201.6741185467736 2 601.8448974490166 MULTI CID FTMS 0 0 0 17203 96201.796875 0.2728361516747106 2 -0.2420730590820312 16 Oxidation (M) _IIM(Oxidation (M))LEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 32.037481411007896 0.2488723560272515 4 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}ERV 10 -1 + 70.099 0.0 0.0 5.8334 5.8334 87.12 0.0 0.0 0.0 26.453650195120844 11.73393743112328 11.73393743112328 12.430380486862944 0 0.8494850021680094 2.0 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}ERV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}[RD]{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}N[{I|L}P]PY{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}N[{I|L}P]P{I|L}Y;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}GG[{I|L}P]PY{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}GG[{I|L}P]P{I|L}Y 5.8334;4.799;4.0676;4.0427;3.305;3.2801 +;-;-;-;-;- + 423 + 1 1.311 51100.6 0.5299999713897705 12208 5009 17203 HBL1_DMSO_200M_050219_2,17219 HBL1_DMSO_200M_050219_2,17219,IIMLEALERV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17220 91.329 563.0 169650.0 25 0 16415.0 -1 YYITLIMLL 9 133 579.8282567792972 1157.6419606253944 2 579.8260375857353 MULTI CID FTMS 0 0 0 17203 90994.609375 1.0 0 0.0 17 Oxidation (M) _YYITLIM(Oxidation (M))LL_ ENSG00000197147|ENST00000330947|LRRC8B 26.34127834903884 0.1960301806784604 4 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}S[Q{I|L}]{M(Oxidation (M))|F}{I|L}{I|L} 10 -1 + 48.893 0.0 0.0 4.2235 4.2235 73.608 0.0 0.0 0.0 8.073922774392877 9.20055737786221 8.073922774392877 5.084011684580929 0 0.6989700043360187 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}S[Q{I|L}]{M(Oxidation (M))|F}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}PS[Q{I|L}]{M(Oxidation (M))|F}{I|L}{I|L};{[TV]|[{I|L}S]}WW{I|L}PM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[KC]{I|L}PM{I|L}{I|L};{[TV]|[{I|L}S]}WWP{I|L}M{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[KC]P{I|L}M{I|L}{I|L};{[TV]|[{I|L}S]}WW{I|L}D{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[KC]{I|L}D{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}WWPM{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[KC]PM{I|L}{I|L}{I|L} 4.2235;3.7844;3.2326;3.2128;3.0805;3.0607;2.9516;2.9319;2.7995;2.7797 -;-;-;-;-;-;-;-;-;- 935 + 1 1.311 74506.4 1.0 12209 5009 17203 HBL1_DMSO_200M_050219_2,17220 HBL1_DMSO_200M_050219_2,17220,YYITLIMLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17221 91.336 390.0 175870.0 25 0 22406.0 + -1 LEMATTADEV 10 125 548.247246576214 1094.479940219228 2 548.2480346560478 MULTI CID FTMS 0 0 0 17203 85940.5703125 1.0 0 0.0 18 Oxidation (M) _LEM(Oxidation (M))ATTADEV_ REV__ENSG00000181026|ENST00000332810|AEN;REV__ENST00000557927.1_1_15:89172339-89173522:+|nuORF;REV__nc|ENSG00000181026|Q8WTP8-2|AEN 10.073929032068715 0.6785112666868882 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}GY[WD]T{I|L} 9 -1 + 30.426 0.0 0.0 2.7799 2.7799 65.424 0.0 0.0 0.0 12.934671230411965 8.03756741013514 8.03756741013514 2.4987747321660017 0 0.0 0.7695510786217261 0.2887254899964357 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}GY[WD]T{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}GEM{[CT]|[{M(Oxidation (M))|F}G]}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}GY[WE]S{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}WM{[CT]|[{M(Oxidation (M))|F}G]}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}GEM{[MS]|[{M(Oxidation (M))|F}A]}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}GYVC{I|L}{[CP]|[EA]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}WM{[MS]|[{M(Oxidation (M))|F}A]}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}GY[WE]TV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[HS][DP]CPV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}GEM{[MS]|[{M(Oxidation (M))|F}A]}TV 2.7799;2.5516;2.256;2.2298;2.0277;1.7255;1.7059;1.5795;1.4149;1.3512 -;-;-;-;-;-;-;-;-;- 503 + 1 1.311 59691.8 1.0 12210 5009 17203 HBL1_DMSO_200M_050219_2,17221 HBL1_DMSO_200M_050219_2,17221,LEMATTADEV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17223 91.341 57.0 697100.0 25 0 29693.0 + 35407 TTVEDLGSKILL 12 79 644.8717562790855 1287.728959624971 2 644.8721191287041 MULTI CID FTMS 0 0 0 17222 818008.1875 0.4966587058375484 1 -0.1084518432617187 1 Unmodified _STIEEDLKKLI_ ENSG00000172270|ENST00000333511|BSG;chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;ENST00000576925.3_1_19:572634-579657:+|nuORF;nc|ENSG00000172270|P35613-2|BSG 36.506200033944 0.2662161991516171 4 {[DS]|[MA]|[CV]|TT}VEWWK{I|L}{I|L}{I|L} 10 6 + 57.898 0.0 0.0 4.4961 4.4961 67.537 0.0 0.0 0.0 2.341284356197235 2.341284356197235 2.341284356197235 0.9540949884680004 0 2.3935078169319297 0.0 2.110924374808178 0.0 {[DS]|[MA]|[CV]|TT}VEWWK{I|L}{I|L}{I|L};{[DS]|[MA]|[CV]|TT}VED{I|L}[SG]K{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}TEWWK{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}TED{I|L}[SG]K{I|L}{I|L}{I|L};[VG][KT]{I|L}{I|L}DD{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[DS]|[MA]|[CV]|TT}VE[QA]{I|L}{[MG]|[TS]}{I|L}{I|L}{I|L};[VG][KT]{I|L}DE{[MG]|[TS]}{I|L}{I|L}{I|L};[VG][KT]{I|L}D{I|L}D{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[VG][KT]{I|L}{I|L}DE{[MG]|[TS]}{I|L}{I|L};{[DS]|[MA]|[CV]|TT}VE[QA]{I|L}V{[DS]|[MA]|[CV]|TT}{I|L}{I|L} 4.4961;4.422;3.5442;3.4701;3.4441;3.4188;3.2766;3.2766;3.2103;3.1851 -;-;-;-;-;-;-;-;-;- 1271 1 1.329 39918.9 1.0 12211 5010 17222 HBL1_DMSO_200M_050219_2,17223 HBL1_DMSO_200M_050219_2,17223,STIEEDLKKLI False False TTVEDLGSKILL 91.341401 644.872119128704 24545792.0 17222.0 ENSG00000172270|ENST00000333511|BSG;;chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;;ENST00000576925.3_1_19:572634-579657:+|nuORF;;nc|ENSG00000172270|P35613-2|BSG 7.720173676808675 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17224 91.343 88.0 525150.0 25 0 63843.0 + 29504 QLLEKVIEL 9 76 542.8344117803898 1083.6542706275795 2 542.8346435427666 MULTI CID FTMS 0 0 0 17222 404851.53125 0.212470340825725 2 -0.2193679809570312 2 Unmodified _QLLEKVIEL_ ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;nc|ENSG00000093144|Q9NTX5-4|ECHDC1;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1 58.6788170122104 0.0268135626297836 4 {[QN]|[E{I|L}]|[KN]}KV{I|L}{M(Oxidation (M))|F}{I|L} 7 3 40.62 0.0 0.0 3.7484 0.0 0.0 0.0 238.12092036806703 238.12092036806703 25.04637850141166 0.0 0.0 0.0 0 0.6307196863200843 1.0 0.6643943297944485 0.0 {[QN]|[E{I|L}]|[KN]}KV{I|L}{M(Oxidation (M))|F}{I|L} 3.7484 - 249 1 1.329 42747.1 1.0 12212 5010 17222 HBL1_DMSO_200M_050219_2,17224 HBL1_DMSO_200M_050219_2,17224,QLLEKVIEL True True QLLEKVIEL 91.34337 542.834643542767 14061507.0 17222.0 nc|ENSG00000093144|Q9NTX5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;;ENSG00000093144|ENST00000454859|ECHDC1;;nc|ENSG00000093144|Q9NTX5-4|ECHDC1 3.330977280934652 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17225 91.345 45.0 1537600.0 25 0 126310.0 + 44979 YPRLSIPNL 9 96 536.81079257504 1071.6070322168798 2 536.8124267458916 MULTI CID FTMS 0 0 0 17222 1025901.5 0.8533509509829242 1 -0.1084518432617187 3 Unmodified _YPRLSIPNL_ ENSG00000242265|ENST00000612748|PEG10;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 36.12702656103203 0.0967173616627612 4 [{I|L}P]DKY{I|L}PN{I|L} 9 4 + 45.31 0.0 0.0 4.2282 4.2282 72.282 0.0 0.0 0.0 4.0893539297350046 16.09685302692629 4.0893539297350046 4.0893539297350046 0 0.7742275032520141 1.2218487496163564 0.3807196863200844 0.3807196863200844 [{I|L}P]DKY{I|L}PN{I|L};[DP]{I|L}KY{I|L}PN{I|L};{NN|[MP]|[D{I|L}]|[EV]}PKY{I|L}PN{I|L};[{I|L}P]DK{I|L}YPN{I|L};[DP]{I|L}K{I|L}YPN{I|L};{NN|[MP]|[D{I|L}]|[EV]}PK{I|L}YPN{I|L};[WR][KQ][WR]{I|L};[{I|L}P]{[HG]|PP}[{I|L}P]{I|L}P[DN] 4.2282;3.8466;3.4585;3.2207;2.839;2.451;1.6666;0.02177 -;-;-;-;-;-;-;- 179 1 1.329 58480.6 1.0 12213 5010 17222 HBL1_DMSO_200M_050219_2,17225 HBL1_DMSO_200M_050219_2,17225,YPRLSIPNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17226 91.346 61.0 1275500.0 25 0 156190.0 + 21928 LPPIKVLVV 9 84 489.3415789132267 976.6686048932536 2 489.3416931033134 MULTI CID FTMS 0 0 0 17222 911423.5625 0.5594341185377044 -2 0.2127532958984375 4 Unmodified _LPPIKVLVV_ ENSG00000056736|ENST00000288167|IL17RB;ENST00000475124.1_1_3:53892553-53899332:+|nuORF 34.10243960390752 0.1078313939113124 4 [{I|L}P]KV{I|L}VP{I|L}V 9 4 + 71.08 0.0 0.0 7.2778 7.2778 84.981 0.0 0.0 0.0 23.490217871458867 14.973024840566469 14.973024840566469 4.771212547196626 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}P]KV{I|L}VP{I|L}V;[{I|L}P]KV{I|L}PV{I|L}V;[{I|L}P]KVP{I|L}V{I|L}V;[{I|L}P]KPV{I|L}V{I|L}V;[{I|L}V]KP{I|L}VP{I|L}V;[{I|L}V]KP{I|L}PV{I|L}V;[K{I|L}]PV{I|L}VP{I|L}V;[K{I|L}]PV{I|L}PV{I|L}V;[{I|L}V]KPP{I|L}V{I|L}V;[K{I|L}]VP{I|L}VP{I|L}V 7.2778;6.7893;6.1729;5.5564;4.8727;4.3842;4.3066;3.8181;3.7677;3.6902 -;-;-;-;-;-;-;-;-;- 529 1 1.329 66028.1 1.0 12214 5010 17222 HBL1_DMSO_200M_050219_2,17226 HBL1_DMSO_200M_050219_2,17226,LPPIKVLVV True True LPPIKVLVV 91.346111 489.341693103313 35449312.0 17222.0 ENST00000475124.1_1_3:53892553-53899332:+|nuORF;;ENSG00000056736|ENST00000288167|IL17RB 3.9711005687713614 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17227 91.348 68.0 690980.0 25 0 106940.0 + 41573 VPPENIIYI 9 70 529.3001695460804 1056.585786158961 2 529.3001586794853 MULTI CID FTMS 0 0 0 17222 579815.125 0.5322115311249686 -6 0.69287109375 5 Unmodified _VPPENIIYI_ ENSG00000155096|ENST00000337198|AZIN1;ENST00000522311.1_1_8:103848756-103855898:-|nuORF 29.081581746732265 0.1611639662936252 4 N{I|L}V{I|L}Y{I|L} 6 5 54.513 0.0 0.0 5.1594 0.0 0.0 323.14705092597814 0.0 323.14705092597814 0.0 27.5582617929814 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.3054621874040891 N{I|L}V{I|L}Y{I|L} 5.1594 - 176 1 1.329 43215.0 1.0 12215 5010 17222 HBL1_DMSO_200M_050219_2,17227 HBL1_DMSO_200M_050219_2,17227,VPPENIIYI False True VPPENIIYI 91.347741 529.300158679485 35881844.0 17222.0 ENST00000522311.1_1_8:103848756-103855898:-|nuORF;;ENSG00000155096|ENST00000337198|AZIN1 6.035386880238851 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17228 91.35 117.0 573130.0 25 0 65167.0 + 45112 YPYPYPHTLYL 11 82 713.8555883491424 1425.6966237650847 2 713.8562499880791 MULTI CID FTMS 0 0 0 17222 458862.28125 1.0 0 0.0 6 Unmodified _YPYPYPHTLYL_ ENSG00000116221|ENST00000360840|MRPL37 74.92900055777586 0.0181202892152222 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}Y{M(Oxidation (M))|F}{I|L}Y{I|L} 11 5 + 95.008 0.0 0.0 6.664 6.664 85.285 0.0 0.0 0.0 22.08597403982388 6.7213915398078825 6.7213915398078825 6.817496819840656 0 1.510638087671366 2.0 2.2971062485323515 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}Y{M(Oxidation (M))|F}{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}Y{I|L}{M(Oxidation (M))|F}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}YE{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YAT{I|L}Y{I|L}E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[Y{I|L}]{M(Oxidation (M))|F}AT{I|L}Y{M(Oxidation (M))|F}{I|L}Y{I|L};[Y{I|L}]{M(Oxidation (M))|F}AT{I|L}Y{I|L}{M(Oxidation (M))|F}Y{I|L};[Y{I|L}]{M(Oxidation (M))|F}AT{I|L}YE{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[Y{I|L}]{M(Oxidation (M))|F}AT{I|L}Y{I|L}E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}{M(Oxidation (M))|F}{I|L}Y{M(Oxidation (M))|F}{I|L}Y{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}YPY{M(Oxidation (M))|F}{I|L}Y{I|L} 6.664;6.1858;5.6173;5.5297;5.1148;4.6366;4.0682;3.9805;3.937;3.8811 -;-;-;-;-;-;-;-;-;- 786 1 1.329 54525.2 1.0 12216 5010 17222 HBL1_DMSO_200M_050219_2,17228 HBL1_DMSO_200M_050219_2,17228,YPYPYPHTLYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17229 91.352 107.0 471250.0 25 0 49347.0 + 3120 AVPEVAVYL 9 63 480.7735926549348 959.5326323766697 2 480.7737609744072 MULTI CID FTMS 0 0 0 17222 370271.96875 0.5893215872580396 -1 0.1336212158203125 7 Unmodified _AVPEVAVYL_ ENSG00000119383|ENST00000393370|PTPA;nc|ENSG00000119383|Q15257-3|PTPA;nc|ENSG00000119383|Q15257-4|PTPA;nc|ENSG00000119383|Q15257|PTPA 23.1484247019978 0.2366544122328345 4 [EP]VAVA 6 4 41.427 0.0 0.0 4.3174 0.0 0.0 0.0 390.2017357304384 390.2017357304384 12.296962438796156 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [EP]VAVA 4.3174 - 192 1 1.329 43867.9 1.0 12217 5010 17222 HBL1_DMSO_200M_050219_2,17229 HBL1_DMSO_200M_050219_2,17229,AVPEVAVYL False True AVPEVAVYL 91.352451 480.773760974407 10541865.0 17222.0 ENSG00000119383|ENST00000393370|PTPA;;nc|ENSG00000119383|Q15257-3|PTPA;;nc|ENSG00000119383|Q15257|PTPA;;nc|ENSG00000119383|Q15257-4|PTPA 4.696246941884358 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17230 91.355 96.0 481130.0 25 0 92368.0 + -1 YPYVGILHV 9 79 530.6536510512664 1588.939123753999 3 530.6537353396416 MULTI CID FTMS 0 0 0 17222 335499.53125 0.982014816224122 -1 0.1336212158203125 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LRRRPRVYYRI_ ENSG00000161904|ENST00000293760|LEMD2;nc|ENSG00000161904|Q8NC56-2|LEMD2 0.0948413911109767 0.8747004676205551 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VYK 5 -1 27.792 0.0 0.0 1.7491 0.0 0.0 0.0 935.5708735921428 935.5708735921428 3.4577059700770008 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VYK 1.7491 - 98 1 1.329 44580.7 1.0 12218 5010 17222 HBL1_DMSO_200M_050219_2,17230 HBL1_DMSO_200M_050219_2,17230,LRRRPRVYYRI False False YPYVGILHV 91.354526 530.6547 10090729.0 17222.0 ENSG00000161904|ENST00000293760|LEMD2;;nc|ENSG00000161904|Q8NC56-2|LEMD2 8.151734987894693 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17231 91.358 163.0 442510.0 25 0 84515.0 + 3741 DAFTFRHFL 9 85 577.2926955753014 1152.5708382174028 2 577.2933837771416 MULTI CID FTMS 0 0 0 17222 328602.5625 1.0 0 0.0 9 Unmodified _DAFTFRHFL_ ENSG00000167487|ENST00000300976|KLHL26 40.72490554402381 0.0714771638475563 4 {[DA]|[EG]}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}RH{M(Oxidation (M))|F}{I|L} 9 0 + 75.033 0.0 0.0 6.51 6.51 90.817 0.0 0.0 0.0 65.92986265876426 10.20181229336984 10.20181229336984 16.989700043360187 0 1.774227503252014 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}RH{M(Oxidation (M))|F}{I|L};W{M(Oxidation (M))|F}T{M(Oxidation (M))|F}[VG]H{M(Oxidation (M))|F}{I|L};W{M(Oxidation (M))|F}{I|L}[YQ]H{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}[{I|L}A]HH{[ET]|[MV]};W[KT]WSW{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[Y{I|L}]WH{M(Oxidation (M))|F}{I|L};W[KT]W[Y{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[Y{I|L}]HW{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[Y{I|L}]{[DA]|[EG]}H{M(Oxidation (M))|F}{I|L} 6.51;5.036;3.9515;2.4437;2.4171;0.92806;0.79362;0.44496;0.12445 +;-;-;-;-;-;-;-;- + 268 + 1 1.329 59365.4 1.0 12219 5010 17222 HBL1_DMSO_200M_050219_2,17231 HBL1_DMSO_200M_050219_2,17231,DAFTFRHFL True True DAFTFRHFL 91.357745 577.293383777142 4243645.125 17222.0 ENSG00000167487|ENST00000300976|KLHL26 8.385079701741537 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17232 91.362 228.0 233360.0 25 0 24629.0 30016 QTLKEPLCVL 10 83 572.3252247868007 1142.6358966404014 2 572.8268310427666 MULTI CID FTMS 0 0 0 17222 230677.4375 0.8752382496036535 2 -0.2193679809570312 10 Unmodified _QTLKEPLCVL_ ENST00000492955.1_1_2:160759386-160759473:-|nuORF 13.042465956692816 0.6287021003332052 4 [VP]SV{[QS]|[NT]}V{I|L} 8 8 25.824 0.0 0.0 2.2601 0.0 0.0 0.0 330.14849800168435 330.14849800168435 11.845012469977767 0.0 0.0 0.0 0 0.0 0.744727494896694 0.4247425010840047 0.3494850021680094 [VP]SV{[QS]|[NT]}V{I|L} 2.2601 - 220 1 1.329 44472.4 1.0 12220 5010 17222 HBL1_DMSO_200M_050219_2,17232 HBL1_DMSO_200M_050219_2,17232,QTLKEPLCVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17233 91.365 135.0 481040.0 25 0 67263.0 311 ADVLLVGSEAF 11 73 560.7969139452459 0 560.7965576052666 PEAK CID FTMS 0 0 0 17222 222934.625 0.9087087494852304 -1 0.1336212158203125 11 Unmodified _ADVLLVGSEAF_ ENSG00000167930|ENST00000399932|FAM234A;nc|ENSG00000167930|Q9H0X4-2|FAM234A 20.41453444215458 0.3478569044516306 4 {I|L}V{I|L}{I|L} 4 8 29.553 0.0 0.0 2.6396 0.0 0.0 285.1340901552658 393.1017855279906 678.2358756832565 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}V{I|L}{I|L} 2.6396 - 142 + 1 1.329 54062.3 1.0 12221 5010 17222 HBL1_DMSO_200M_050219_2,17233 HBL1_DMSO_200M_050219_2,17233,ADVLLVGSEAF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17234 91.379 800.0 185540.0 25 0 10463.0 -1 0 121 782.3612123948951 2344.0618077848853 3 783.0303832888603 MULTI CID FTMS 0 0 0 17222 216799.453125 0.5610042288905616 2 -0.2193679809570312 12 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 64.752 0.0 0.0 2.7624 0.0 0.0 0.0 1303.4503663328042 1303.4503663328042 48.47565804064112 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.5941876774005248 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.7624 - 1269 1 1.329 116032.0 0.7799999713897705 12222 5010 17222 HBL1_DMSO_200M_050219_2,17234 HBL1_DMSO_200M_050219_2,17234, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17235 91.383 225.0 336020.0 25 0 53505.0 + 11165 GELFRTHFF 9 89 385.1978080124602 1152.5715946375806 3 385.1977111697197 MULTI CID FTMS 0 0 0 17222 191319.671875 0.9550983326733022 -1 0.1336212158203125 13 Unmodified _GELFRTHFF_ ENSG00000100347|ENST00000350028|SAMM50;ENST00000474323.5_1_22:44371844-44392260:+|nuORF 12.872603262515298 0.4882369880199512 4 {[DA]|[EG]}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}[RH]{M(Oxidation (M))|F}{I|L} 9 4 + 41.577 0.0 0.0 3.6073 3.6073 63.864 0.0 0.0 0.0 11.539843494254995 0.6069784035361181 0.6069784035361181 0.6069784035361181 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}[RH]{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}[RH]{I|L}{M(Oxidation (M))|F} 3.6073;3.5547 -;- 128 + 1 1.329 69490.3 1.0 12223 5010 17222 HBL1_DMSO_200M_050219_2,17235 HBL1_DMSO_200M_050219_2,17235,GELFRTHFF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17236 91.397 800.0 345110.0 25 0 77087.0 + 45908 YYTGALPDYYY 11 143 694.8053502936617 1387.5961476541231 2 694.8065063357353 MULTI CID FTMS 0 0 0 17222 186968.265625 0.2850216970530214 -2 0.2127532958984375 14 Unmodified _YYTGALPDYYY_ REV__ENSG00000004534|ENST00000266022|RBM6;REV__ENST00000434592.5_1_3:50097096-50127827:+|nuORF;REV__ENST00000441115.5_1_3:50012785-50103056:+|nuORF;REV__nc|ENSG00000004534|P78332-2|RBM6 65.23502041540118 0.047899150100457 4 YYDYP{I|L}AGTYY 11 -1 + 78.166 0.0 0.0 5.6332 5.6332 81.094 0.0 0.0 0.0 16.22119785256932 9.04493885409363 9.04493885409363 6.575773191777941 0 1.1237125054200234 2.0 0.75 0.0 YYDYP{I|L}AGTYY;YYDYP{I|L}QTYY;YYYDP{I|L}AGTYY;YYYDP{I|L}QTYY;[NP]DDYP{I|L}AGTYY;[DP]NDYP{I|L}AGTYY;[{M(Oxidation (M))|F}V]QDDP{I|L}AGTYY;YY[{I|L}P]YDAGTYY;[{M(Oxidation (M))|F}V]GADDP{I|L}AGTYY;[NP]DDYP{I|L}QTYY 5.6332;5.1593;5.061;4.5871;4.4642;4.1236;4.0479;4.0443;4.0228;3.9877 -;-;-;-;-;-;-;-;-;- 12885 1 1.329 194447.1 0.75 12224 5010 17222 HBL1_DMSO_200M_050219_2,17236 HBL1_DMSO_200M_050219_2,17236,YYTGALPDYYY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17237 91.411 800.0 87188.0 25 0 2997.3 -1 0 99 873.6558043258285 3490.594111436914 4 874.1568481326103 MULTI CID FTMS 0 0 0 17222 181116.453125 1.0 0 0.0 15 4 {M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 11 -1 32.224 0.0 0.0 0.92317 0.0 0.0 2251.0722628200456 0.0 2251.0722628200456 0.0 0.0968254009211193 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 {M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 0.92317 - 1730 + 1 1.329 54515.0 0.7099999785423279 12225 5010 17222 HBL1_DMSO_200M_050219_2,17237 HBL1_DMSO_200M_050219_2,17237, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17238 91.426 800.0 231980.0 25 0 32091.0 + 16199 IVIPTDLERL 10 136 584.8502216290533 1167.6858903249065 2 584.8505737185478 MULTI CID FTMS 0 0 0 17222 167216.953125 1.0 0 0.0 16 Unmodified _IVIPTDLERL_ ENSG00000136874|ENST00000259400|STX17;ENST00000533696.5_1_9:102677473-102691149:+|nuORF 42.312485326615175 0.1331477410672653 4 {I|L}V{I|L}PTD{I|L}ER{I|L} 10 0 + 100.84 0.0 0.0 8.6358 8.6358 90.345 0.0 0.0 0.0 33.52182518111363 7.269987279362624 7.269987279362624 7.269987279362624 0 0.9247425010840048 1.6989700043360187 0.4247425010840047 0.0 + + {I|L}V{I|L}PTD{I|L}ER{I|L};{I|L}V{I|L}PTD{I|L}E{I|L}R;{I|L}V{I|L}PTD{I|L}[W{I|L}]V;{I|L}V{I|L}PTEEVR{I|L};{I|L}V{I|L}PTEEV{I|L}R;{I|L}V{I|L}{I|L}P[{M(Oxidation (M))|F}E]QP{I|L};{I|L}V{I|L}P{I|L}[{M(Oxidation (M))|F}E]QP{I|L};{I|L}V{I|L}{I|L}P[{M(Oxidation (M))|F}E]AGP{I|L};{I|L}V{I|L}P{I|L}[{M(Oxidation (M))|F}E]AGP{I|L};{I|L}V{I|L}PTEE[R{I|L}]V 8.6358;8.0132;6.923;6.7722;6.1496;5.4084;5.3669;5.1151;5.0736;5.0594 +;-;-;-;-;-;-;-;-;- + 768 + 1 1.329 141042.3 0.6899999976158142 12226 5010 17222 HBL1_DMSO_200M_050219_2,17238 HBL1_DMSO_200M_050219_2,17238,IVIPTDLERL False True IVIPTDLERL 91.425561 584.850573718548 1524376.75 17222.0 ENSG00000136874|ENST00000259400|STX17;;ENST00000533696.5_1_9:102677473-102691149:+|nuORF 4.806538343429565 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17239 91.43 248.0 361840.0 25 0 75961.0 + 34049 SLLDKLSGI 9 89 473.2846969766746 944.5548410201492 2 473.2844726443291 MULTI CID FTMS 0 0 0 17222 160502.15625 0.6074577206945504 -1 0.1336212158203125 17 Unmodified _SLLDKLSGI_ chr1:23875662-23879504|26|10.96|0.11|6.7|-|0|TE_info:AluJb,AluJb_dup2046,Alu,SINE,donor,+,23879504,23879642|CNR2,None|2;chr1:23875662-23913246|42|25.21|0.45|5.81|-|0|CNR2,CNR2|1 45.69961567697781 0.0497987121815769 4 {[TV]|[{I|L}S]}{I|L}DK{I|L}SG{I|L} 9 0 + 72.194 0.0 0.0 7.6432 7.6432 79.062 0.0 0.0 0.0 21.656118883576013 5.563025007672877 5.563025007672877 0.8714085989487046 0 0.8494850021680094 2.0 0.9876954943324544 0.0 + + {[TV]|[{I|L}S]}{I|L}DK{I|L}SG{I|L};{[TV]|[{I|L}S]}{I|L}DK{I|L}GS{I|L};{[TV]|[{I|L}S]}{I|L}DK{I|L}SAV;{[TV]|[{I|L}S]}{I|L}DK{I|L}GTV;{[TV]|[{I|L}S]}{I|L}DK{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7.6432;7.5509;7.0542;6.962;6.6683 +;-;-;-;- + 377 + 1 1.329 72265.5 1.0 12227 5010 17222 HBL1_DMSO_200M_050219_2,17239 HBL1_DMSO_200M_050219_2,17239,SLLDKLSGI True True SLLDKLSGI 91.430167 473.284472644329 2010873.0 17222.0 chr1:23875662-23913246|42|25.21|0.45|5.81|-|0|CNR2,CNR2|1;;chr1:23875662-23879504|26|10.96|0.11|6.7|-|0|TE_info:AluJb,AluJb_dup2046,Alu,SINE,donor,+,23879504,23879642|CNR2,None|2 3.8797510464986167 2.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 17240 91.435 235.0 268860.0 25 0 26867.0 23650 LTQYLKEI 8 109 504.2923761875836 1006.5701994419672 2 504.7921020388603 MULTI CID FTMS 0 0 0 17222 160140.46875 0.0480293071941177 -6 0.69287109375 18 Unmodified _LTQYLKEI_ ENSG00000164332|ENST00000296786|UBLCP1;ENST00000519276.1_1_5:158701561-158711936:+|nuORF 20.453626601364224 0.6087503291685402 4 {M(Oxidation (M))|F}R{I|L}VYPQ 7 8 24.914 0.0 0.0 2.4751 0.0 0.0 85.0897694318375 0.0 85.0897694318375 0.0 6.16782621717007 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}R{I|L}VYPQ 2.4751 - 288 1 1.329 52843.6 1.0 12228 5010 17222 HBL1_DMSO_200M_050219_2,17240 HBL1_DMSO_200M_050219_2,17240,LTQYLKEI False True FPYVLKEI 91.434571 504.79210203886 2482593.5 17222.0 ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 1.9181872010231016 2.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17241 91.439 231.0 367430.0 25 0 66050.0 + 30396 RARQRLLSV 9 78 549.8474932554903 1097.6804335777806 2 549.8478881716728 MULTI CID FTMS 0 0 0 17222 127817.359375 0.4648489792634094 -1 0.1336212158203125 19 Unmodified _RARQRLLSV_ REV__ENSG00000100116|ENST00000248924|GCAT;REV__nc|ENSG00000100116|O75600-2|GCAT 24.99096001346401 0.2132109383330889 4 {[TV]|[{I|L}S]}V[TP]G{I|L}{I|L}{I|L}SV 11 -1 + 55.115 0.0 0.0 5.0211 5.0211 71.91 0.0 0.0 0.0 2.1520266687719456 4.827122913103878 2.1520266687719456 2.1520266687719456 0 1.274227503252014 1.0457574905606752 0.1694451763165201 0.0 {[TV]|[{I|L}S]}V[TP]G{I|L}{I|L}{I|L}SV;[VS]{I|L}[TP]G{I|L}{I|L}{I|L}SV;{I|L}{I|L}[RD]G{I|L}{I|L}{I|L}SV;{[QN]|[E{I|L}]|[KN]}[RV]G{I|L}{I|L}{I|L}W;{[QN]|[E{I|L}]|[KN]}RR{I|L}{I|L}{I|L}W;AAE{I|L}{I|L}G{I|L}{I|L}{I|L}SV 5.0211;4.825;4.3142;3.8574;3.2672;3.2395 -;-;-;-;-;- 158 1 1.329 68748.9 1.0 12229 5010 17222 HBL1_DMSO_200M_050219_2,17241 HBL1_DMSO_200M_050219_2,17241,RARQRLLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17242 91.445 306.0 223790.0 25 0 61753.0 36707 TDFKALLI 8 104 460.7762423677008 919.5379318022016 2 460.7766601443291 MULTI CID FTMS 0 0 0 17222 120127.1640625 0.6455650280011306 -1 0.1336212158203125 20 Unmodified _TDFKALLI_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 36.04419817259434 0.3004715606373109 4 [{I|L}A]K{M(Oxidation (M))|F}C{I|L}{I|L}{I|L} 8 5 [{I|L}A]K{M(Oxidation (M))|F}C{I|L} + + 21.454 -5.044 -0.74687 2.3331 2.3331 44.901 0.0 0.0 0.0 0.0 6.488255516215915 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 [{I|L}A]K{M(Oxidation (M))|F}C{I|L}{I|L}{I|L} 2.3331 - 165 + 1 1.329 56629.7 1.0 12230 5010 17222 HBL1_DMSO_200M_050219_2,17242 HBL1_DMSO_200M_050219_2,17242,TDFKALLI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17244 91.453 222.0 634150.0 25 0 27597.0 -1 0 124 1164.538671535127 3490.594185205581 3 1165.208544909954 MULTI CID FTMS 0 0 0 17243 981894.625 0.9236235609015562 1 -0.1109161376953125 1 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V[W{M(Oxidation (M))|F}]NKN{I|L}NP{M(Oxidation (M))|F}N{I|L}VKY{M(Oxidation (M))|F}ANQQN{M(Oxidation (M))|F}M[Q{I|L}] 28 -1 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V[W{M(Oxidation (M))|F}]NKN{I|L}NP{M(Oxidation (M))|F} + + 79.115 54.105 3.3117 2.2665 2.2665 44.816 0.0 0.0 0.0 0.0 18.34244409179611 0.0 0.0 0 0.805462187404089 0.0 0.0 1.1989700043360187 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}V[W{M(Oxidation (M))|F}]NKN{I|L}NP{M(Oxidation (M))|F}N{I|L}VKY{M(Oxidation (M))|F}ANQQN{M(Oxidation (M))|F}M[Q{I|L}] 2.2665 - 87786 + 1 1.349 86895.6 1.0 12231 5011 17243 HBL1_DMSO_200M_050219_2,17244 HBL1_DMSO_200M_050219_2,17244, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17245 91.456 151.0 351970.0 25 0 44188.0 + 33383 SGLLKVWQV 9 100 515.3080373879011 1028.601521842602 2 515.3086425662041 MULTI CID FTMS 0 0 0 17243 146788.140625 0.1976249640488387 2 -0.2042083740234375 2 Unmodified _SGLLKVWQV_ ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF 9.38312468134398 0.5871240394367778 4 Y{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V 5 6 14.437 0.0 0.0 1.4036 0.0 0.0 360.2380707701396 0.0 360.2380707701396 0.0 4.348331157524967 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V 1.4036 - 168 + 1 1.349 45493.1 1.0 12232 5011 17243 HBL1_DMSO_200M_050219_2,17245 HBL1_DMSO_200M_050219_2,17245,SGLLKVWQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17246 91.457 58.0 1199300.0 25 0 178760.0 + 867 AEVDVNQKLLL 11 87 621.3575757175456 1240.7005985018911 2 621.3591796755791 MULTI CID FTMS 0 0 0 17243 911881.75 0.0152532377522697 -3 0.3212051391601562 3 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 42.312485326615175 0.1767732348921932 4 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L} 12 -1 + 108.49 0.0 0.0 8.7443 8.7443 86.864 0.0 0.0 0.0 11.139433523068362 16.611814434466197 11.139433523068362 4.086064542866666 0 2.2614393726401687 1.6989700043360187 0.9604093769761876 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}W{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{[VA]|[{I|L}G]}EDVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}VEVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{[DA]|[EG]}{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}W{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}W{I|L}{I|L}{I|L} 8.7443;8.415;8.1723;7.9028;7.8465;7.7424;7.7141;7.6792;7.5735;7.5171 -;-;-;-;-;-;-;-;-;- 10573 1 1.349 55326.7 1.0 12233 5011 17243 HBL1_DMSO_200M_050219_2,17246 HBL1_DMSO_200M_050219_2,17246,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17247 91.459 73.0 882370.0 25 0 133960.0 + 25758 NIVDKFVIV 9 86 523.8145314729021 1045.614510012604 2 523.8160888552666 MULTI CID FTMS 0 0 0 17243 730996.375 1.0 0 0.0 4 Unmodified _NIVDKFVIV_ ENSG00000101224|ENST00000245960|CDC25B;nc|ENSG00000101224|P30305-2|CDC25B;nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B 36.506200033944 0.094635877243972 4 {[QV]|[N{I|L}]|[RA]|[KV]}VYV{I|L}N{I|L}V 9 4 + 68.835 0.0 0.0 6.5832 6.5832 79.876 0.0 0.0 0.0 24.432342842105896 10.330145895351848 10.330145895351848 3.0102999566398125 0 1.4731975075880328 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}VYV{I|L}N{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}VY{I|L}VN{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}VYVQV{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}VY{I|L}NV{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}VYV{I|L}GG{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}VYV[AG]V{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}VY{I|L}VGG{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}VY{I|L}GGV{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}V{M(Oxidation (M))|F}V{I|L}N{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}V{M(Oxidation (M))|F}VQV{I|L}V 6.5832;6.2953;6.2953;6.0074;5.7025;5.4146;5.4146;5.1267;4.2465;3.9586 -;-;-;-;-;-;-;-;-;- 509 1 1.349 55829.9 1.0 12234 5011 17243 HBL1_DMSO_200M_050219_2,17247 HBL1_DMSO_200M_050219_2,17247,NIVDKFVIV True True NIVDKFVIV 91.458829 523.816088855267 5738494.5 17243.0 nc|ENSG00000101224|P30305-3|CDC25B;;nc|ENSG00000101224|P30305-2|CDC25B;;nc|ENSG00000101224|P30305-4|CDC25B;;ENSG00000101224|ENST00000245960|CDC25B 4.144644419352214 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17248 91.461 97.0 529620.0 25 0 58175.0 + 37859 TLVEEMSATV 10 93 540.2663829014775 1078.518212869755 2 540.2665893435478 MULTI CID FTMS 0 0 0 17243 436377.875 0.4057738530629447 -2 0.2420730590820312 5 Unmodified _TLVEEMSATV_ REV__ENSG00000122432|ENST00000699524|SPATA1;REV__nc|ENSG00000122432|Q5VX52|SPATA1 20.453626601364224 0.5043500229302764 4 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}WDA 6 -1 22.184 0.0 0.0 2.0569 0.0 0.0 0.0 328.188818898814 328.188818898814 -1.5358294348276935 0.0 -1.5358294348276935 0.0 0 0.0 1.3010299956639813 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}WDA 2.0569 - 330 1 1.349 47880.8 1.0 12235 5011 17243 HBL1_DMSO_200M_050219_2,17248 HBL1_DMSO_200M_050219_2,17248,TLVEEMSATV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17249 91.464 152.0 350510.0 25 0 64416.0 + 30606 RFAWLWLLPLL 11 72 476.62402087245096 1426.8502332175528 3 476.6240112185478 MULTI CID FTMS 0 0 0 17243 405135.6875 0.9775964836411116 -2 0.2420730590820312 6 Unmodified _RFAWLWLLPLL_ REV__ENST00000265563.12_1_3:48788858-48788939:-|nuORF 0.5059551277355931 0.8727608062196215 4 {I|L} 1 -1 12.218 0.0 0.0 0.85633 0.0 0.0 1295.7553826089577 0.0 1295.7553826089577 0.0 6.812412373755875 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.85633 + + 30 + 1 1.349 53111.3 1.0 12236 5011 17243 HBL1_DMSO_200M_050219_2,17249 HBL1_DMSO_200M_050219_2,17249,RFAWLWLLPLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17250 91.467 183.0 570290.0 25 0 90744.0 + + 43269 RAADVLVYL 9 91 510.29798953635947 1018.581426139519 2 510.2982665896416 MULTI CID FTMS 0 0 0 17243 348076.25 0.3845234758913857 -2 0.2420730590820312 7 Unmodified _WGGVLIVYI_ nc|ENSG00000227942|Q9BZ68|FRMD8P1;ENSG00000126391|ENST00000317568|FRMD8;nc|ENSG00000126391|Q9BZ67-3|FRMD8 20.871210003555333 0.2717241269066626 4 [YV][H{I|L}]{I|L}VY{I|L} 8 -1 + 54.213 0.0 0.0 5.3224 5.3224 83.776 0.0 0.0 0.0 7.447274948966935 43.244171855527966 7.447274948966935 9.414996084138352 0 0.8807196863200843 1.6989700043360187 0.0 0.0 [YV][H{I|L}]{I|L}VY{I|L};[{I|L}P]RRCVY{I|L};{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}VY{I|L};[{I|L}P]{[ES]|[DT]|[{I|L}C]}[KA]VY{I|L};[R{I|L}][PS][TA]VY{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}P][TA]VY{I|L} 5.3224;4.3981;4.3281;3.7843;3.2141;2.6825 -;-;-;-;-;- 141 1 1.349 85203.2 1.0 12237 5011 17243 HBL1_DMSO_200M_050219_2,17250 HBL1_DMSO_200M_050219_2,17250,WGGVLIVYI False False RAADVLVYL 91.467498 510.298266589642 15223551.0 17243.0 nc|ENSG00000227942|Q9BZ68|FRMD8P1;;ENSG00000126391|ENST00000317568|FRMD8;;nc|ENSG00000126391|Q9BZ67-3|FRMD8 5.729640960693359 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17251 91.47 111.0 473600.0 25 0 37319.0 + 10158 FPYAFKEVI 9 88 557.3024106264426 1112.590268319685 2 557.3030273318291 MULTI CID FTMS 0 0 0 17243 344542.03125 0.3449760758364164 -2 0.2420730590820312 8 Unmodified _FPYAFKEVI_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 43.77239144664712 0.0547478964384323 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YAKE{M(Oxidation (M))|F}[{I|L}V] 9 2 + 60.071 0.0 0.0 5.3992 5.3992 78.234 0.0 0.0 0.0 4.915215343448622 4.3526426316392985 4.3526426316392985 4.915215343448622 0 1.5994850021680094 2.0 0.3494850021680094 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YAKE{M(Oxidation (M))|F}[{I|L}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}AK[YV]PE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F}KE{M(Oxidation (M))|F}[{I|L}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}AKE{M(Oxidation (M))|F}[{I|L}V];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{M(Oxidation (M))|F}K[YV]PE;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{M(Oxidation (M))|F}KE{M(Oxidation (M))|F}[{I|L}V];{M(Oxidation (M))|F}P[YV]KAE{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YAAA[YV][{I|L}V];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{M(Oxidation (M))|F}KE{M(Oxidation (M))|F}[{I|L}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F}AA[YV][{I|L}V] 5.3992;4.9574;4.7468;4.6345;4.3051;3.9822;3.6258;3.2003;2.8879;2.548 -;-;-;-;-;-;-;-;-;- 1025 1 1.349 45910.1 1.0 12238 5011 17243 HBL1_DMSO_200M_050219_2,17251 HBL1_DMSO_200M_050219_2,17251,FPYAFKEVI True True FPYAFKEVI 91.469846 557.303027331829 28497550.0 17243.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1;;ENST00000493342.1_1_X:24745055-24752029:+|nuORF 6.212311903635661 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17252 91.473 183.0 638360.0 25 0 109140.0 + 10183 FQDEINWRL 9 80 610.8073067661412 1219.6000605990823 2 610.8068725466728 MULTI CID FTMS 0 0 0 17243 318992.5625 0.1533190840989803 -2 0.2420730590820312 9 Unmodified _FQDEINWRL_ ENSG00000102226|ENST00000377107|USP11;ENST00000469080.5_1_X:47092634-47106681:+|nuORF;nc|ENSG00000102226|P51784|USP11 89.40071534611396 0.0152361884002446 4 {M(Oxidation (M))|F}QDE{I|L}NWR{I|L} 9 0 + 85.249 0.0 0.0 6.9899 6.9899 78.753 0.0 0.0 0.0 1.7216751192405155 1.7216751192405155 1.7216751192405155 1.7216751192405155 0 1.424742501084005 0.0 0.805462187404089 1.2134679910804405 + + {M(Oxidation (M))|F}QDE{I|L}NWR{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VVN{I|L}EDQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RR{I|L}EDQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DERR{I|L}QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[KP]{I|L}EDQE;{M(Oxidation (M))|F}[AG]DE{I|L}NWR{I|L};{M(Oxidation (M))|F}QDE{I|L}GGWR{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VVGG{I|L}EDQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VVN{I|L}ED[AG]E;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RR{I|L}ED[AG]E 6.9899;6.8487;6.56;6.5517;6.4026;6.2349;6.2349;6.0973;6.0973;5.805 +;-;-;-;-;-;-;-;-;- + 325 + 1 1.349 92412.3 1.0 12239 5011 17243 HBL1_DMSO_200M_050219_2,17252 HBL1_DMSO_200M_050219_2,17252,FQDEINWRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17253 91.477 170.0 285820.0 25 0 45355.0 + 33761 SLAQYLINA 9 81 496.7744082203354 0 496.7744628787041 PEAK CID FTMS 0 0 0 17243 312716.25 1.0 0 0.0 10 Unmodified _SLAQYLINA_ ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3 41.8396318013385 0.053988301646488 4 {I|L}SAQ 4 7 26.67 0.0 0.0 2.6898 0.0 0.0 316.1730097006334 273.12384973697505 589.2968594376084 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 {I|L}SAQ 2.6898 - 129 + 1 1.349 41533.5 1.0 12240 5011 17243 HBL1_DMSO_200M_050219_2,17253 HBL1_DMSO_200M_050219_2,17253,SLAQYLINA True True SLAQYLINA 91.476709 496.774462878704 2770505.25 17243.0 nc|ENSG00000183570|P57721-5|PCBP3;;ENSG00000183570|ENST00000681687|PCBP3;;nc|ENSG00000183570|P57721-3|PCBP3;;nc|ENSG00000183570|P57721-2|PCBP3;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000183570|P57721-4|PCBP3 5.240180969238281 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17254 91.479 112.0 512030.0 25 0 57487.0 + 34252 SLQEKLWAI 9 107 544.3106818550605 1086.6068107769208 2 544.3112060427666 MULTI CID FTMS 0 0 0 17243 291425.375 1.0 0 0.0 11 Unmodified _SLQEKLWAI_ ENSG00000101417|ENST00000409299|PXMP4;ENST00000217398.3_1_20:32295514-32298573:-|nuORF 36.506200033944 0.094635877243972 4 {[TV]|[{I|L}S]}QE[K{I|L}]WA{I|L} 9 0 + 47.743 0.0 0.0 4.3938 4.3938 67.362 0.0 0.0 0.0 20.737862141609185 17.676018304350297 17.676018304350297 1.0713565751421257 0 1.4604093769761874 2.0 0.3807196863200844 0.0 + + {[TV]|[{I|L}S]}QE[K{I|L}]WA{I|L};{[TV]|[{I|L}S]}GAE[K{I|L}]WA{I|L};{[TV]|[{I|L}S]}Q{[VA]|[{I|L}G]}WA{I|L}S{I|L};{[TV]|[{I|L}S]}QE{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}S{I|L};{[TV]|[{I|L}S]}GAE{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}S{I|L};{[TV]|[{I|L}S]}Q{[VA]|[{I|L}G]}{[TV]|[{I|L}S]}WA{I|L};{[TV]|[{I|L}S]}G[Q{I|L}]WA{I|L}S{I|L};{[TV]|[{I|L}S]}Q{[VA]|[{I|L}G]}{[DA]|[EG]}A{I|L}S{I|L};{[TV]|[{I|L}S]}Q{[VA]|[{I|L}G]}W{[TV]|[{I|L}S]}A{I|L};{[TV]|[{I|L}S]}QE{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}A{I|L} 4.3938;4.2952;4.1618;4.1561;4.0615;3.552;3.3482;3.3183;3.3155;3.3098 +;-;-;-;-;-;-;-;-;- + 726 1 1.349 49504.9 1.0 12241 5011 17243 HBL1_DMSO_200M_050219_2,17254 HBL1_DMSO_200M_050219_2,17254,SLQEKLWAI True True SLQEKLWAI 91.479077 544.311206042767 2308067.0 17243.0 ENST00000217398.3_1_20:32295514-32298573:-|nuORF;;ENSG00000101417|ENST00000409299|PXMP4 4.60589615503947 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17255 91.482 169.0 630080.0 25 0 107350.0 + 15706 IQTAVRLLL 9 136 513.8371278484109 1025.6597027636217 2 513.8383666872978 MULTI CID FTMS 0 0 0 17243 275232.21875 0.4133676082651453 -2 0.2420730590820312 12 Unmodified _IQTAVRLLL_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000146047|ENST00000274764|H2BC1;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;HIST1H2BJ|p.P104Rfs*?|1|0.23|ENSG00000124635|chr6:27132410-27132440|TCGGACACGGCGTGCTTGGCCAACTCCCCAG/-|frameshift_variant;HIST1H2BJ|p.P104T|1|0.48|ENSG00000124635|chr6:27132441-27132441|G/T|missense_variant;nc|ENSG00000203814|Q5QNW6-2|H2BC18 86.33184430468982 0.0159826143231117 4 {I|L}QTAVR{I|L}{I|L}{I|L} 9 0 + 62.761 0.0 0.0 6.1191 6.1191 86.818 0.0 0.0 0.0 38.56791452034167 8.164792321168264 8.164792321168264 9.247425010840049 0 1.8539171939081167 0.6575773191777937 0.7887254899964358 0.3807196863200844 + + {I|L}QTAVR{I|L}{I|L}{I|L};{I|L}Q{I|L}ASR{I|L}{I|L}{I|L};{I|L}QTAKK[KP]{I|L};{I|L}[AG]TAVR{I|L}{I|L}{I|L};{I|L}ATGAVR{I|L}{I|L}{I|L};{I|L}[AG]{I|L}ASR{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}[Q{I|L}]{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}Q{I|L}{I|L};{I|L}ATQVR{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}{I|L}Q{I|L} 6.1191;5.2175;4.7214;4.5802;3.9486;3.6785;3.512;3.3125;3.0443;2.4049 +;-;-;-;-;-;-;-;-;- + 950 + 1 1.349 84866.7 1.0 12242 5011 17243 HBL1_DMSO_200M_050219_2,17255 HBL1_DMSO_200M_050219_2,17255,IQTAVRLLL True True IQTAVRLLL 91.482386 513.838366687298 5370352.5 17243.0 HIST1H2BJ|p.P104Rfs*?|1|0.23|ENSG00000124635|chr6:27132410-27132440|TCGGACACGGCGTGCTTGGCCAACTCCCCAG/-|frameshift_variant;;ENSG00000277224|ENST00000356530|H2BC7;;ENSG00000274641|ENST00000616182|H2BC17;;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;;ENSG00000273802|ENST00000541790|H2BC8;;ENSG00000274290|ENST00000614097|H2BC6;;nc|ENSG00000203814|Q5QNW6-2|H2BC18;;ENSG00000203814|ENST00000369167|H2BC18;;ENSG00000233822|ENST00000612898|H2BC15;;ENSG00000146047|ENST00000274764|H2BC1;;HIST1H2BJ|p.P104T|1|0.48|ENSG00000124635|chr6:27132441-27132441|G/T|missense_variant;;ENSG00000276410|ENST00000615966|H2BC3;;ENSG00000124635|ENST00000339812|H2BC11;;ENSG00000234289|ENST00000599962|H2BC12L;;ENSG00000275713|ENST00000619466|H2BC9;;ENSG00000158373|ENST00000377777|H2BC5;;ENSG00000273703|ENST00000621112|H2BC14;;ENSG00000278588|ENST00000377733|H2BC10;;ENSG00000180596|ENST00000396984|H2BC4;;ENSG00000197903|ENST00000356950|H2BC12;;ENSG00000185130|ENST00000377401|H2BC13;;ENSG00000184678|ENST00000369155|H2BC21 3.096952756245931 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17256 91.486 211.0 416900.0 25 0 64740.0 + 9521 FLFEDFSKA 9 92 552.2739941953784 1102.5334354575566 2 552.2747070193291 MULTI CID FTMS 0 0 0 17243 239306.109375 1.0 0 0.0 13 Unmodified _FLFEDFSKA_ ENSG00000109084|ENST00000226230|TMEM97 49.55428908609986 0.0413471690215031 4 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}S[KA] 9 0 + 68.58 0.0 0.0 6.2202 6.2202 89.091 0.0 0.0 0.0 52.41689290714618 7.262036441594191 7.262036441594191 13.979400086720377 0 0.7742275032520141 0.0 0.8494850021680094 0.25 + + {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}S[KA];[KS][HV]DE{M(Oxidation (M))|F}{I|L}E;[KS]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}E{M(Oxidation (M))|F}{I|L}E;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{[CT]|[{M(Oxidation (M))|F}G]}E{M(Oxidation (M))|F}{I|L}E;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K[W{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{I|L}E;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}]KC{I|L} 6.2202;4.9523;4.5196;3.8285;3.2409;2.8314 +;-;-;-;-;- + 335 + 1 1.349 73456.0 1.0 12243 5011 17243 HBL1_DMSO_200M_050219_2,17256 HBL1_DMSO_200M_050219_2,17256,FLFEDFSKA True True FLFEDFSKA 91.486402 552.274707019329 2318793.0 17243.0 ENSG00000109084|ENST00000226230|TMEM97 8.032562732696533 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17257 91.493 384.0 279560.0 25 0 44141.0 + -1 MLCEPAYWFV 10 116 666.2930912289509 1330.5716295247016 2 666.2939941287041 MULTI CID FTMS 0 0 0 17243 240316.796875 0.5611585067116714 2 -0.2042083740234375 14 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))LC(Carbamidomethyl (C))EPAYWFV_ REV__ENSG00000162434|ENST00000342505|JAK1 11.640296217721598 0.652229146672156 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L}C 8 -1 62.75 0.0 0.0 4.716 0.0 0.0 0.0 380.13617965581415 380.13617965581415 41.09463981984403 0.0 0.0 0.0 0 0.8494850021680094 1.0969100130080565 0.0 1.4436726795685342 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPP{I|L}C 4.716 - 1264 1 1.349 82797.8 1.0 12244 5011 17243 HBL1_DMSO_200M_050219_2,17257 HBL1_DMSO_200M_050219_2,17257,MLCEPAYWFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17258 91.501 439.0 136070.0 25 0 21538.0 -1 ALMAAPLSL 9 78 451.75274496202985 901.4909369908596 2 451.7529785037041 MULTI CID FTMS 0 0 0 17243 134915.296875 0.0103881498950946 96 -7.407012939453125 15 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L} 9 -1 + 63.082 0.0 0.0 6.9975 6.9975 84.948 0.0 0.0 0.0 11.901508504421583 9.889917747712644 9.889917747712644 5.440680443502757 0 0.6989700043360187 2.0 0.5 0.0 [{I|L}A]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[{I|L}A]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[TV]|[{I|L}S]}MPAS{I|L}A{I|L};{[TV]|[{I|L}S]}MAPS{I|L}A{I|L};[PS]{M(Oxidation (M))|F}PAS{I|L}A{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L};[{I|L}A][WE]S{I|L}A{I|L};[PS]{M(Oxidation (M))|F}APS{I|L}A{I|L};{[HG]|PP}S{M(Oxidation (M))|F}AS{I|L}A{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L} 6.9975;6.394;5.6773;5.0738;4.9452;4.9452;4.8668;4.3416;4.1501;4.0915 -;-;-;-;-;-;-;-;-;- 275 1 1.349 51941.7 1.0 12245 5011 17243 HBL1_DMSO_200M_050219_2,17258 HBL1_DMSO_200M_050219_2,17258,ALMAAPLSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17259 91.515 800.0 94389.0 25 0 12264.0 -1 0 98 668.6756123300374 2003.0050075903123 3 669.0105468630791 MULTI CID FTMS 0 0 0 17243 131395.640625 1.0 0 0.0 16 4 P{I|L}VR{[QN]|[E{I|L}]|[KN]} 6 -1 28.031 0.0 0.0 1.3995 0.0 0.0 1277.5616968773531 0.0 1277.5616968773531 0.0 16.604705826628184 0.0 0.0 0 0.0 0.0 0.5 0.2396518287104437 P{I|L}VR{[QN]|[E{I|L}]|[KN]} 1.3995 - 191 + 1 1.349 65980.3 0.6000000238418579 12246 5011 17243 HBL1_DMSO_200M_050219_2,17259 HBL1_DMSO_200M_050219_2,17259, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17260 91.53 800.0 221050.0 25 0 9061.0 -1 0 130 943.475313160726 1884.936073388252 2 943.9742309451104 MULTI CID FTMS 0 0 0 17243 129096.46875 0.4558113397867916 18 -1.9952392578125 17 4 [{I|L}T]SPN{I|L}VT 8 -1 43.172 0.0 0.0 2.2904 0.0 0.0 0.0 1056.45673472583 1056.45673472583 4.195925227640984 0.0 0.0 0.0 0 0.0 2.0 0.8609243748081783 0.3494850021680094 [{I|L}T]SPN{I|L}VT 2.2904 - 7624 1 1.349 115199.2 0.5799999833106995 12247 5011 17243 HBL1_DMSO_200M_050219_2,17260 HBL1_DMSO_200M_050219_2,17260, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17261 91.544 800.0 122820.0 25 0 9556.5 + 44405 YLYDRLLRI 9 104 408.90835353552416 1223.7032312067724 3 409.2432433962822 MULTI CID FTMS 0 0 0 17243 119274.8515625 0.3831058664513851 2 -0.2042083740234375 18 Unmodified _YLYDRLLRI_ ENSG00000101003|ENST00000262460|GINS1 18.373094154950223 0.3393451798331396 4 Y{I|L}{I|L}RRN 6 5 50.138 0.0 0.0 4.0972 0.0 0.0 0.0 405.1880886424726 405.1880886424726 37.663800089887545 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.4247425010840047 Y{I|L}{I|L}RRN 4.0972 - 100 + 1 1.349 82564.9 0.4399999976158142 12248 5011 17243 HBL1_DMSO_200M_050219_2,17261 HBL1_DMSO_200M_050219_2,17261,YLYDRLLRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17262 91.551 315.0 373800.0 25 0 80970.0 -1 0 86 357.74178102679934 713.4690091203987 2 357.7415954470634 MULTI CID FTMS 0 0 0 17243 115901.796875 0.2205125517427701 -2 0.2420730590820312 19 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}K{I|L} 6 -1 + 55.568 0.0 0.0 7.7885 7.7885 62.483 0.0 0.0 0.0 26.478174818886377 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.2887254899964357 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}K{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}{I|L}K;{I|L}{I|L}K{I|L}D{I|L};[K{I|L}]{I|L}{I|L}D{I|L} 7.7885;7.7885;2.4799;1.15 -;-;-;- 54 + 1 1.349 98193.1 1.0 12249 5011 17243 HBL1_DMSO_200M_050219_2,17262 HBL1_DMSO_200M_050219_2,17262, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17263 91.555 252.0 380840.0 25 0 86480.0 + -1 IMGSCQLRL 9 109 547.2759542781139 1092.5373556230277 2 547.2753173708916 MULTI CID FTMS 0 0 0 17243 112151.5234375 1.0 0 0.0 20 Carbamidomethyl (C),Oxidation (M) _IM(Oxidation (M))GSC(Carbamidomethyl (C))QLRL_ REV__nc|ENSG00000143742|P49458-2|SRP9 9.347437153973935 0.588369872918737 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L}P 5 -1 22.307 0.0 0.0 2.0418 0.0 0.0 0.0 562.2394179611714 562.2394179611714 8.1259189508755 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L}P 2.0418 - 181 1 1.349 79392.1 1.0 12250 5011 17243 HBL1_DMSO_200M_050219_2,17263 HBL1_DMSO_200M_050219_2,17263,IMGSCQLRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17265 91.561 98.0 534940.0 25 0 71850.0 + 21684 LPLPHFDTI 9 84 526.7921541353119 1051.5697553374237 2 526.7927123904228 MULTI CID FTMS 0 0 0 17264 416217.78125 0.1195502068953136 4 -0.458099365234375 1 Unmodified _LPLPHFDTI_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 36.506200033944 0.094635877243972 4 {I|L}P{I|L}[HM]D{I|L}T{I|L} 9 3 + 63.497 0.0 0.0 6.0383 6.0383 91.272 0.0 0.0 0.0 42.92342188037523 8.816140487536401 8.816140487536401 63.49661578021767 0 1.4177353201839438 2.0 0.4247425010840047 0.0 {I|L}P{I|L}[HM]D{I|L}T{I|L} 6.0383 - 119 + 1 1.361 48408.0 1.0 12251 5012 17264 HBL1_DMSO_200M_050219_2,17265 HBL1_DMSO_200M_050219_2,17265,LPLPHFDTI True True LPLPHFDTI 91.561435 526.792712390423 41814024.0 17264.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 6.878671805063884 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17266 91.574 695.0 238490.0 25 0 14846.0 + 30808 RIIDSLFNTV 10 156 589.332663422293 1176.6507739113858 2 589.3331176638603 MULTI CID FTMS 0 0 0 17264 189931.265625 0.4900586904456947 1 -0.093292236328125 2 Unmodified _RIIDSLFNTV_ ENSG00000109814|ENST00000316423|UGDH;nc|ENSG00000109814|O60701-2|UGDH;nc|ENSG00000109814|O60701-3|UGDH 69.33821966488729 0.0189579340102328 4 {[TV]|[{I|L}S]}D[R{I|L}]{I|L}{M(Oxidation (M))|F}NTV 10 4 + 81.704 0.0 0.0 6.9437 6.9437 76.118 0.0 0.0 0.0 0.3945559318614897 16.53212513775344 0.3945559318614897 0.3945559318614897 0 1.4291746928241125 0.9208187539523752 1.5565533887547016 0.3252574989159953 {[TV]|[{I|L}S]}D[R{I|L}]{I|L}{M(Oxidation (M))|F}NTV;{NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]{I|L}{M(Oxidation (M))|F}NTV;[R{I|L}]{I|L}DS{I|L}{M(Oxidation (M))|F}NTV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}NTV;{[TV]|[{I|L}S]}D[R{I|L}]{I|L}{M(Oxidation (M))|F}GGTV;{NN|[MP]|[D{I|L}]|[EV]}S[R{I|L}]{I|L}{M(Oxidation (M))|F}GGTV;[R{I|L}]{I|L}DS{I|L}{M(Oxidation (M))|F}GGTV;{[QN]|[E{I|L}]|[KN]}[RV]S{I|L}{M(Oxidation (M))|F}NTV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}GGTV;{[QN]|[E{I|L}]|[KN]}[RV]S{I|L}{M(Oxidation (M))|F}GGTV 6.9437;6.9102;6.6682;6.5926;6.1649;6.1313;5.8893;5.8729;5.8137;5.094 -;-;+;-;-;-;-;-;-;- + 2106 1 1.361 127418.1 1.0 12252 5012 17264 HBL1_DMSO_200M_050219_2,17266 HBL1_DMSO_200M_050219_2,17266,RIIDSLFNTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17267 91.575 42.0 1397600.0 25 0 83225.0 + 21181 DMPLVRLEV 9 85 535.7976560668055 1069.580759200411 2 536.2979614138603 MULTI CID FTMS 0 0 0 17264 805528.1875 1.0 0 0.0 3 Unmodified _LPDAFLPAQV_ ENST00000461241.1_1_22:31523357-31529733:+|nuORF;nc|ENSG00000185133|Q15735-2|INPP5J;nc|ENSG00000185133|Q15735-3|INPP5J;ENSG00000185133|ENST00000331075|INPP5J 15.847184025352805 0.5816416552707754 4 [MN]P{I|L}V 5 8 22.218 0.0 0.0 2.0773 0.0 0.0 0.0 512.2840059869749 512.2840059869749 -0.9028874993307312 0.0 -0.9028874993307312 0.0 0 0.0 0.0 0.0 0.0 [MN]P{I|L}V 2.0773 - 95 + 1 1.361 54414.8 1.0 12253 5012 17264 HBL1_DMSO_200M_050219_2,17267 HBL1_DMSO_200M_050219_2,17267,LPDAFLPAQV False False DMPLVRLEV 91.574718 536.29796141386 7209182.5 17264.0 ENST00000461241.1_1_22:31523357-31529733:+|nuORF;;nc|ENSG00000185133|Q15735-2|INPP5J;;nc|ENSG00000185133|Q15735-3|INPP5J;;ENSG00000185133|ENST00000331075|INPP5J 3.705613295237223 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17268 91.578 181.0 287800.0 25 0 42470.0 + 26533 NVIDNLIVA 9 89 485.7819795896355 969.549406246071 2 485.7822753787041 MULTI CID FTMS 0 0 0 17264 225701.78125 0.0027050933743641 16 -1.77569580078125 4 Unmodified _NVIDNLIVA_ ENSG00000143621|ENST00000361891|ILF2 25.399314129420983 0.2080152500878129 4 {[NV]|[RG]}E{[NV]|[RG]}{I|L} 6 5 15.15 0.0 0.0 1.5626 0.0 0.0 0.0 298.17385178045146 298.17385178045146 3.730329228344777 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 {[NV]|[RG]}E{[NV]|[RG]}{I|L} 1.5626 - 188 1 1.361 44809.0 1.0 12254 5012 17264 HBL1_DMSO_200M_050219_2,17268 HBL1_DMSO_200M_050219_2,17268,NVIDNLIVA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17269 91.581 155.0 301560.0 25 0 26429.0 + 27155 PFRTQLMQL 9 88 567.3081119579417 1132.6016709826831 2 567.3102294802666 MULTI CID FTMS 0 0 0 17264 219704.8125 0.8081117915599088 1 -0.093292236328125 5 Unmodified _PFRTQLMQL_ REV__ENSG00000143569|ENST00000428931|UBAP2L;REV__nc|ENSG00000143569|Q14157-1|UBAP2L;REV__nc|ENSG00000143569|Q14157-3|UBAP2L;REV__nc|ENSG00000143569|Q14157-4|UBAP2L;REV__nc|ENSG00000143569|Q14157-5|UBAP2L 20.453626601364224 0.2830276176381075 4 [{I|L}A]G{M(Oxidation (M))|F}WW{I|L}Q{I|L} 9 -1 [{I|L}A]G{M(Oxidation (M))|F}WW{I|L}Q + + 13.979 3.6118 0.36063 1.2343 1.2343 44.262 0.0 0.0 0.0 0.0 -11.427900303521312 -11.427900303521312 0.0 0 0.0 0.0 0.0 0.0 [{I|L}A]G{M(Oxidation (M))|F}WW{I|L}Q{I|L} 1.2343 - 203 + 1 1.361 41084.9 1.0 12255 5012 17264 HBL1_DMSO_200M_050219_2,17269 HBL1_DMSO_200M_050219_2,17269,PFRTQLMQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17270 91.583 99.0 648100.0 25 0 78207.0 43184 VYVYRFLA 8 90 515.7902430886921 0 515.7897216677666 PEAK CID FTMS 0 0 0 17264 156922.0625 0.5913338575235088 -1 0.1109161376953125 6 Unmodified _VYVYRFLA_ ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;nc|ENSG00000085224|P46100-5|ATRX 13.50788311687929 0.5021269579892848 4 VY{I|L}VG 5 6 24.196 0.0 0.0 2.3501 0.0 0.0 262.1318644959404 233.1046846979125 495.23654919385297 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 VY{I|L}VG 2.3501 - 150 + 1 1.361 55870.1 1.0 12256 5012 17264 HBL1_DMSO_200M_050219_2,17270 HBL1_DMSO_200M_050219_2,17270,VYVYRFLA False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17271 91.597 800.0 244060.0 25 0 10052.0 -1 0 139 781.4050513213723 2341.1933245643168 3 781.7408325076103 MULTI CID FTMS 0 0 0 17264 123088.375 1.0 0 0.0 7 4 [H{I|L}][HK]{M(Oxidation (M))|F}Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SN{I|L}{I|L} 12 -1 53.043 0.0 0.0 2.2656 0.0 0.0 0.0 851.4129039923042 851.4129039923042 31.580207124811423 0.0 0.0 0.0 0 1.924742501084005 1.3979400086720375 0.0 0.3494850021680094 [H{I|L}][HK]{M(Oxidation (M))|F}Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SN{I|L}{I|L} 2.2656 - 4285 1 1.361 141278.4 0.5899999737739563 12257 5012 17264 HBL1_DMSO_200M_050219_2,17271 HBL1_DMSO_200M_050219_2,17271, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17272 91.611 800.0 181420.0 25 0 21952.0 + + 3187 GLVGALMHV 9 157 448.2840871053542 894.5536212775085 2 448.2842590212822 MULTI CID FTMS 0 0 0 17264 127090.09375 0.092730186566555 3 -0.3256759643554687 8 Unmodified _AVVPANLLV_ ENSG00000015285|ENST00000376701|WAS;ENST00000470107.1_1_X:48547419-48547927:+|nuORF 32.116972079565 0.1225432171549407 4 {[VA]|[{I|L}G]}AP{I|L}AAA{I|L}V 10 -1 + 44.551 0.0 0.0 4.9802 4.9802 75.616 0.0 0.0 0.0 15.185139398778876 8.194765492042109 8.194765492042109 4.333683131867204 0 0.6237125054200234 2.0 0.0 0.0 {[VA]|[{I|L}G]}AP{I|L}AAA{I|L}V;{[VA]|[{I|L}G]}AP{[NV]|[RG]}{I|L}{I|L}V;{[VA]|[{I|L}G]}APA{I|L}AA{I|L}V;{[VA]|[{I|L}G]}APAAA{I|L}{I|L}V;{[VA]|[{I|L}G]}AP{I|L}{[NV]|[RG]}{I|L}V;{[VA]|[{I|L}G]}G[NP]{I|L}{I|L}{I|L}V;AAVP{I|L}AAA{I|L}V;{[VA]|[{I|L}G]}VG[QP]{I|L}{I|L}V;{[VA]|[{I|L}G]}GV[QP]{I|L}{I|L}V;AAVP{[NV]|[RG]}{I|L}{I|L}V 4.9802;4.4957;4.4891;3.739;3.5;3.3902;3.2827;3.1347;3.0959;2.7982 -;-;-;-;-;-;-;-;-;- 1002 1 1.361 114224.1 0.9800000190734864 12258 5012 17264 HBL1_DMSO_200M_050219_2,17272 HBL1_DMSO_200M_050219_2,17272,AVVPANLLV False False GLVGALMHV 91.611114 448.284259021282 1771988.625 17264.0 ENSG00000015285|ENST00000376701|WAS;;ENST00000470107.1_1_X:48547419-48547927:+|nuORF 6.846769014994304 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17273 91.621 576.0 243800.0 25 0 11916.0 + 35445 STLHLVLRL 9 153 351.2257507279637 1050.6554227840911 3 351.2265197634697 MULTI CID FTMS 0 0 0 17264 109135.171875 0.0053866688743575 16 -1.77569580078125 9 Unmodified _STLHLVLRL_ chr19:18571887-18574870|17|40.47|0.48|6.39|+|2|UBA52,UBA52|1;ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 24.020572477871973 0.2255576514309169 4 {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}] 9 0 + 37.782 0.0 0.0 3.596 3.596 68.376 0.0 0.0 0.0 22.29725473285795 3.65279269351241 3.65279269351241 3.0102999566398125 0 0.2887254899964357 0.0 0.0 0.0 + + {[MG]|[TS]}{I|L}H{I|L}V{I|L}[R{I|L}];{[MG]|[TS]}{I|L}{I|L}HV{I|L}[R{I|L}];{[MG]|[TS]}{I|L}H{I|L}{I|L}V[R{I|L}];{[MG]|[TS]}{I|L}{I|L}H{I|L}V[R{I|L}] 3.596;3.3095;2.6442;2.3577 +;-;-;- + 151 + 1 1.361 115006.9 1.0 12259 5012 17264 HBL1_DMSO_200M_050219_2,17273 HBL1_DMSO_200M_050219_2,17273,STLHLVLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17274 91.631 558.0 278960.0 25 0 38165.0 + 33730 SLADLMPRV 9 165 501.2757021766761 0 501.2758972048759 PEAK CID FTMS 0 0 0 17264 99730.5390625 0.488492920330345 -3 0.3529891967773437 10 Unmodified _SLADLMPRV_ ENSG00000039123|ENST00000230640|MTREX;ENST00000503165.5_1_5:54603841-54625205:+|nuORF;ENST00000504388.5_1_5:54603829-54620403:+|nuORF 39.94969957227396 0.061964645358372 4 AD{I|L}M 4 5 33.928 0.0 0.0 3.391 0.0 0.0 200.11483512560545 367.2099364811452 567.3247716067507 0.0 0.0 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.0 + AD{I|L}M 3.391 + + 858 + 1 1.361 121575.2 1.0 12260 5012 17264 HBL1_DMSO_200M_050219_2,17274 HBL1_DMSO_200M_050219_2,17274,SLADLMPRV True True SLADLMPRV 91.630966 501.275897204876 2774904.0 17264.0 ENSG00000039123|ENST00000230640|MTREX;;ENST00000503165.5_1_5:54603841-54625205:+|nuORF;;ENST00000504388.5_1_5:54603829-54620403:+|nuORF 6.992900689442952 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17275 91.635 129.0 455450.0 25 0 131430.0 + + -1 RPYGVGLLI 9 56 494.3030347113949 986.5915164895898 2 494.3013793826103 MULTI CID FTMS 0 0 0 17264 113741.8359375 0.0437644372888995 -3 0.3529891967773437 11 Carbamidomethyl (C) _LLRC(Carbamidomethyl (C))SLLL_ nc|ENSG00000129084|P25786-2|PSMA1;ENSG00000129084|ENST00000396394|PSMA1 21.74664581756881 0.5868176546531598 4 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VG{I|L}{I|L}{I|L} 9 -1 + 61.132 0.0 0.0 6.1962 6.1962 83.074 0.0 0.0 0.0 12.04119982655925 16.478174818886373 12.04119982655925 6.478174818886373 0 0.9247425010840048 2.0 0.0 0.0 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VG{I|L}{I|L}{I|L};[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R{I|L}{I|L}{I|L};{I|L}{I|L}[C(Carbamidomethyl (C))S]R{I|L}{I|L}{I|L};[K{I|L}][EC]R{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}R{I|L}{I|L}{I|L} 6.1962;5.5396;4.9758;3.4322;3.2073 -;-;-;-;- 158 1 1.361 50395.1 1.0 12261 5012 17264 HBL1_DMSO_200M_050219_2,17275 HBL1_DMSO_200M_050219_2,17275,LLRCSLLL False False RPYGVGLLI 91.635074 494.30137938261 24092554.0 17264.0 nc|ENSG00000129084|P25786-2|PSMA1;;ENSG00000129084|ENST00000396394|PSMA1 4.591144720713298 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17276 91.649 800.0 68145.0 25 0 5128.2 + -1 KVEQCIMK 8 69 1051.5252732027736 1050.5179967361737 1 1053.530322253704 MULTI CID FTMS 0 0 0 17264 100270.640625 0.2888305535664536 6 -0.6887359619140625 12 Carbamidomethyl (C),Oxidation (M) _KVEQC(Carbamidomethyl (C))IM(Oxidation (M))K_ REV__ENSG00000185304|ENST00000398146|RGPD2;REV__ENSG00000187627|ENST00000641458|RGPD1;REV__nc|ENSG00000187627|P0DJD0|RGPD1 16.942295170755138 0.6606234159769251 4 {I|L}NG[TP]N 6 -1 10.851 0.0 0.0 1.033 0.0 0.0 129.0893601168362 322.1406344049438 451.22999452178 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 {I|L}NG[TP]N 1.033 - 129 + 1 1.361 43542.7 0.4199999868869781 12262 5012 17264 HBL1_DMSO_200M_050219_2,17276 HBL1_DMSO_200M_050219_2,17276,KVEQCIMK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17278 91.654 46.0 1716700.0 25 0 200250.0 + 21929 LPPIKVLVV 9 78 489.3415789132267 976.6686048932536 2 489.3417846560478 MULTI CID FTMS 0 0 0 17277 1276101.5 0.7832743712033914 1 -0.1587066650390625 1 Unmodified _LPPIKVLVV_ ENSG00000056736|ENST00000288167|IL17RB;ENST00000475124.1_1_3:53892553-53899332:+|nuORF 36.04419817259434 0.0971720506436186 4 [{I|L}P]KV{I|L}VP 7 3 53.588 0.0 0.0 5.4868 0.0 0.0 0.0 227.1391257667182 227.1391257667182 39.6087259199831 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}P]KV{I|L}VP 5.4868 - 160 1 1.362 65640.9 1.0 12263 5013 17277 HBL1_DMSO_200M_050219_2,17278 HBL1_DMSO_200M_050219_2,17278,LPPIKVLVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17279 91.655 49.0 1105800.0 25 0 172210.0 + 28199 PQDVPLLYL 9 67 529.3001695460804 1056.585786158961 2 529.3005248904228 MULTI CID FTMS 0 0 0 17277 871050.8125 0.7995363808563513 -3 0.3126602172851562 2 Unmodified _PQDVPLLYL_ ENSG00000141098|ENST00000268797|GFOD2;ENST00000602522.1_1_16:67709060-67709966:-|nuORF;nc|ENSG00000141098|Q3B7J2-2|GFOD2 17.11289562659939 0.3734572693229295 4 N{I|L}V{I|L}Y{I|L} 6 5 38.148 0.0 0.0 3.6105 0.0 0.0 323.14790541816564 0.0 323.14790541816564 0.0 23.54425638516595 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.3494850021680094 N{I|L}V{I|L}Y{I|L} 3.6105 - 93 1 1.362 50798.0 1.0 12264 5013 17277 HBL1_DMSO_200M_050219_2,17279 HBL1_DMSO_200M_050219_2,17279,PQDVPLLYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17280 91.657 94.0 660510.0 25 0 182570.0 + 45939 YYYDPLAGTYY 11 72 694.8053502936617 1387.5961476541231 2 694.8063842654228 MULTI CID FTMS 0 0 0 17277 641224.625 0.9775077615377396 1 -0.1587066650390625 3 Unmodified _YYYDPLAGTYY_ ENSG00000004534|ENST00000266022|RBM6;ENST00000434592.5_1_3:50097096-50127827:+|nuORF;ENST00000441115.5_1_3:50012785-50103056:+|nuORF;nc|ENSG00000004534|P78332-2|RBM6 71.92227651296345 0.0268337859456942 4 YYDYP{I|L}A{[SA]|[TG]}YY 11 2 + 65.991 0.0 0.0 4.7558 4.7558 70.985 0.0 0.0 0.0 21.169698069370256 13.934856601806274 13.934856601806274 2.218487496163569 0 1.4291746928241125 2.0 0.5 0.0 YYDYP{I|L}A{[SA]|[TG]}YY;YYYDP{I|L}A{[SA]|[TG]}YY;YYDYP{I|L}[QT]YY;YYYDP{I|L}[QT]YY;YYDYP[WR]YY;YYYDP[WR]YY;[NP]DDYP{I|L}A{[SA]|[TG]}YY;[NP]DYDP{I|L}A{[SA]|[TG]}YY;[NP]YDDP{I|L}A{[SA]|[TG]}YY;[{I|L}P][NP]YDDA{[SA]|[TG]}YY 4.7558;4.5959;4.2819;4.122;3.591;3.4311;3.2301;3.0703;2.9802;2.9558 -;+;-;-;-;-;-;-;-;- + 1220 1 1.362 50333.4 1.0 12265 5013 17277 HBL1_DMSO_200M_050219_2,17280 HBL1_DMSO_200M_050219_2,17280,YYYDPLAGTYY True True YYYDPLAGTYY 91.657222 694.806384265423 14445763.0 17277.0 nc|ENSG00000004534|P78332-2|RBM6;;ENSG00000004534|ENST00000266022|RBM6;;ENST00000434592.5_1_3:50097096-50127827:+|nuORF;;ENST00000441115.5_1_3:50012785-50103056:+|nuORF 7.671152273813884 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17281 91.661 210.0 335160.0 25 0 51794.0 + 15724 IREERQKRLL 10 92 670.9099814357676 1339.805409938335 2 670.9106323122978 MULTI CID FTMS 0 0 0 17277 316646.8125 0.5504306883190705 -1 0.093292236328125 4 Unmodified _IREERQKRLL_ REV__ENSG00000183644|ENST00000375618|HOATZ;REV__nc|ENSG00000183644|Q6PI97-2|HOATZ;REV__nc|ENSG00000183644|Q6PI97-3|HOATZ 10.073929032068715 0.6785112666868882 4 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}N 12 -1 79.77 0.0 0.0 5.9539 0.0 0.0 0.0 113.10421299913506 113.10421299913506 50.23534536336394 0.0 0.0 0.0 0 0.0 1.154901959985743 0.6382104921644451 0.9802046884880936 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}N 5.9539 - 10767 1 1.362 59169.1 1.0 12266 5013 17277 HBL1_DMSO_200M_050219_2,17281 HBL1_DMSO_200M_050219_2,17281,IREERQKRLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17282 91.663 96.0 571330.0 25 0 47592.0 + 3121 AVPEVAVYL 9 77 480.7735926549348 959.5326323766697 2 480.7729980349541 MULTI CID FTMS 0 0 0 17277 277688.59375 0.4419667072953465 2 -0.2323837280273437 5 Unmodified _AVPEVAVYL_ ENSG00000119383|ENST00000393370|PTPA;nc|ENSG00000119383|Q15257-3|PTPA;nc|ENSG00000119383|Q15257-4|PTPA;nc|ENSG00000119383|Q15257|PTPA 23.1484247019978 0.2366544122328345 4 [EP]VAVA 6 4 25.406 0.0 0.0 2.6478 0.0 0.0 0.0 390.2014305546572 390.2014305546572 1.2248627423174696 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [EP]VAVA 2.6478 - 98 1 1.362 47809.3 1.0 12267 5013 17277 HBL1_DMSO_200M_050219_2,17282 HBL1_DMSO_200M_050219_2,17282,AVPEVAVYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17283 91.665 102.0 574690.0 25 0 41611.0 + 26296 NQVPKLLYL 9 95 544.3296815660929 1086.6448101989856 2 544.3309814333916 MULTI CID FTMS 0 0 0 17277 267164.4375 0.6002930947064113 -1 0.093292236328125 6 Unmodified _NQVPKLLYL_ ENSG00000147231|ENST00000372548|RADX;nc|ENSG00000147231|Q6NSI4-2|RADX;nc|ENSG00000147231|Q6NSI4-3|RADX;nc|ENSG00000147231|Q6NSI4-4|RADX 39.957323273325 0.0756908302845263 4 GGQV 4 8 28.66 0.0 0.0 2.6375 0.0 0.0 0.0 742.4509069609575 742.4509069609575 8.654896306227347 0.0 0.0 0.0 0 1.0 0.958607314841775 0.0 0.75 GGQV 2.6375 - 111 1 1.362 52241.2 1.0 12268 5013 17277 HBL1_DMSO_200M_050219_2,17283 HBL1_DMSO_200M_050219_2,17283,NQVPKLLYL True True NQVPKLLYL 91.665497 544.330981433392 4202254.5 17277.0 nc|ENSG00000147231|Q6NSI4-4|RADX;;ENSG00000147231|ENST00000372548|RADX;;nc|ENSG00000147231|Q6NSI4-3|RADX;;nc|ENSG00000147231|Q6NSI4-2|RADX 4.916494846343994 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17284 91.669 184.0 270080.0 25 0 31002.0 + 22614 LPYKIAYYI 9 86 572.3252247868007 1142.6358966404014 2 572.3262206912041 MULTI CID FTMS 0 0 0 17277 236788.984375 1.0 0 0.0 7 Unmodified _LPYKIAYYI_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 34.93206674587334 0.1032771302489716 4 {I|L}P[C(Carbamidomethyl (C))S]{I|L}A{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 10 5 + 60.072 0.0 0.0 5.2573 5.2573 53.618 0.0 0.0 0.0 28.90855530574932 10.24104976468614 10.24104976468614 0.0 0 0.7742275032520141 1.6989700043360187 0.4247425010840047 0.0 {I|L}P[C(Carbamidomethyl (C))S]{I|L}A{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}AY{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}A{I|L}YY{I|L};[{I|L}P]YKAY{I|L}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}AYY{I|L}{I|L};[{I|L}P]YKA{I|L}YY{I|L};[{I|L}P]YKAYY{I|L}{I|L};[YK]P{I|L}AY{I|L}Y{I|L};[{M(Oxidation (M))|F}V]AA{I|L}AY{I|L}Y{I|L};[{M(Oxidation (M))|F}V]TKPY{I|L}Y{I|L} 5.2573;5.2573;4.8397;4.7689;4.6656;4.3514;4.1772;3.8552;3.7342;3.5956 -;-;-;-;-;-;-;-;-;- 568 + 1 1.362 41548.7 1.0 12269 5013 17277 HBL1_DMSO_200M_050219_2,17284 HBL1_DMSO_200M_050219_2,17284,LPYKIAYYI True True LPYKIAYYI 91.669061 572.326220691204 6806463.5 17277.0 ENSG00000197969|ENST00000360280|VPS13A;;nc|ENSG00000197969|Q96RL7-2|VPS13A;;nc|ENSG00000197969|Q96RL7-4|VPS13A;;nc|ENSG00000197969|Q96RL7-3|VPS13A 6.416885058085124 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17285 91.678 491.0 259400.0 25 0 19214.0 + -1 IIMLEALERV 10 126 601.8435215469216 1201.672490160643 2 601.8434326052666 MULTI CID FTMS 0 0 0 17277 183079.96875 0.6462844671006075 -1 0.093292236328125 8 Oxidation (M) _IIM(Oxidation (M))LEALERV_ nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG 35.61225514009592 0.2039006631696762 4 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}ERV 10 -1 + 93.141 0.0 0.0 7.751 7.751 81.408 0.0 0.0 0.0 36.53212513775344 9.727342925659102 9.727342925659102 1.945830421822663 0 0.8807196863200843 2.0 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}ERV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}REV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}RD{I|L};{I|L}{I|L}YPEA{I|L}ERV;{I|L}{I|L}YPEA{I|L}REV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EV[DV]RV;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}EV[Q{I|L}]EV;{I|L}{I|L}YPEA{I|L}RD{I|L};{I|L}{I|L}{M(Oxidation (M))|F}V[DV]{I|L}ERV;{I|L}{I|L}{M(Oxidation (M))|F}V[DV]{I|L}REV 7.751;7.589;6.9415;6.7532;6.5913;6.1906;6.0287;5.9437;5.9401;5.7781 +;-;-;-;-;-;-;-;-;- + 3291 + 1 1.362 93915.6 1.0 12270 5013 17277 HBL1_DMSO_200M_050219_2,17285 HBL1_DMSO_200M_050219_2,17285,IIMLEALERV False False IIMLEALERV 91.677743 601.843432605267 6114461.0 17277.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 7.203870932261149 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17286 91.683 280.0 356760.0 25 0 62392.0 + + 37224 TLIGLSIKV 9 105 472.3129575613487 942.6113621894974 2 472.3123351931572 MULTI CID FTMS 0 0 0 17277 163297.359375 0.3230375903241457 -1 0.093292236328125 9 Unmodified _TIKLLEKV_ ENSG00000166595|ENST00000422424|CIAO2B;ENST00000569299.1_1_16:66967504-66968009:-|nuORF;ENST00000562362.5_1_16:66966108-66968009:-|nuORF 39.957323273325 0.2350051964751539 4 [{I|L}T]{I|L}G{I|L}S{I|L}KV 9 -1 + 62.966 0.0 0.0 6.68 6.68 93.686 0.0 0.0 0.0 26.30609476146597 11.478174818886371 11.478174818886371 62.96639349939967 0 0.6747425010840047 2.0 0.0 0.2396518287104437 [{I|L}T]{I|L}G{I|L}S{I|L}KV 6.68 - 514 + 1 1.362 82108.2 1.0 12271 5013 17277 HBL1_DMSO_200M_050219_2,17286 HBL1_DMSO_200M_050219_2,17286,TIKLLEKV False False TLIGLSIKV 91.682891 472.312335193157 3804981.5 17277.0 ENSG00000166595|ENST00000422424|CIAO2B;;ENST00000569299.1_1_16:66967504-66968009:-|nuORF;;ENST00000562362.5_1_16:66966108-66968009:-|nuORF 4.788130601247151 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17287 91.697 800.0 260550.0 25 0 18315.0 + 45113 YPYPYPHTLYL 11 152 713.8555883491424 1425.6966237650847 2 713.8572265505791 MULTI CID FTMS 0 0 0 17277 154699.578125 0.3371372728731993 3 -0.36480712890625 10 Unmodified _YPYPYPHTLYL_ ENSG00000116221|ENST00000360840|MRPL37 74.92900055777586 0.0181202892152222 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}Y{M(Oxidation (M))|F}{I|L}[Y{I|L}] 11 5 + 56.978 0.0 0.0 3.9965 3.9965 74.589 0.0 0.0 0.0 6.672268755754658 4.357285695614365 4.357285695614365 6.672268755754658 0 1.325257498915995 1.6989700043360187 1.8556270500406933 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}Y{M(Oxidation (M))|F}{I|L}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YP[C(Carbamidomethyl (C))M]E{I|L}{I|L}K{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}Y{I|L}{M(Oxidation (M))|F}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}YYP[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}YE{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}[C(Carbamidomethyl (C))K]YPY{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}Q[WH]PY{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y[TA]{I|L}Y{I|L}E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QN]|[E{I|L}]|[KN]}V{I|L}[C(Carbamidomethyl (C))K]YPY{[QN]|[E{I|L}]|[KN]};{I|L}{I|L}D{I|L}[C(Carbamidomethyl (C))K]YPY{[QN]|[E{I|L}]|[KN]} 3.9965;3.5285;3.4504;3.3948;3.2911;3.2428;3.1521;3.1354;3.1193;3.0659 -;-;-;-;-;-;-;-;-;- 4767 1 1.362 152585.8 0.6700000166893005 12272 5013 17277 HBL1_DMSO_200M_050219_2,17287 HBL1_DMSO_200M_050219_2,17287,YPYPYPHTLYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17288 91.711 800.0 187030.0 25 0 17527.0 43902 YFVPWDPK 8 101 1051.5252732027736 1050.5179967361737 1 1052.526416003704 MULTI CID FTMS 0 0 0 17277 150753.875 0.2178427206953303 5 -0.5954437255859375 11 Unmodified _YFVPWDPK_ ENST00000361354.8_1_2:183853877-183859577:-|nuORF 34.18733598223924 0.3315367612694167 4 {[ES]|[DT]|[{I|L}C]}{I|L}D{I|L}A{I|L}YQ 9 9 + 35.905 0.0 0.0 3.4178 3.4178 46.961 0.0 0.0 0.0 0.0 2.1970490786783685 0.0 0.0 0 0.0 0.0 1.2416440611282624 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}D{I|L}A{I|L}YQ;{[QN]|[E{I|L}]|[KN]}SD{I|L}A{I|L}YQ;[MN][QA]{I|L}A{I|L}YQ;[EP]GV{M(Oxidation (M))|F}D{I|L}{M(Oxidation (M))|F}Q;[EP]VG{M(Oxidation (M))|F}D{I|L}{M(Oxidation (M))|F}Q;{[ES]|[DT]|[{I|L}C]}{I|L}D{I|L}AE{M(Oxidation (M))|F}Q;{[QN]|[E{I|L}]|[KN]}SD{I|L}AE{M(Oxidation (M))|F}Q;[EP]{[MS]|[{M(Oxidation (M))|F}A]}{I|L}A{I|L}YQ;{[ES]|[DT]|[{I|L}C]}{I|L}D{I|L}AQY{I|L};{[QN]|[E{I|L}]|[KN]}SD{I|L}AQY{I|L} 3.4178;3.4178;3.3821;3.1161;3.1161;2.9582;2.9582;2.9468;2.8593;2.8593 -;-;-;-;-;-;-;-;-;- 2976 1 1.362 99657.7 0.6600000262260437 12273 5013 17277 HBL1_DMSO_200M_050219_2,17288 HBL1_DMSO_200M_050219_2,17288,YFVPWDPK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17289 91.719 460.0 584490.0 25 0 88337.0 + 3918 DALGKLISI 9 137 465.2869827307355 928.559412528271 2 465.2874328494072 MULTI CID FTMS 0 0 0 17277 146763.78125 0.0097801014082956 -3 0.3126602172851562 12 Unmodified _DALGKLISI_ ENSG00000089154|ENST00000300648|GCN1 93.93812099017352 0.0133843357737428 4 {[DA]|[EG]}{I|L}GK{I|L}{I|L}S{I|L} 9 0 + 90.107 0.0 0.0 9.704 9.704 92.848 0.0 0.0 0.0 9.898641557451512 9.898641557451512 9.898641557451512 9.14114359259733 0 2.8723637474483468 2.0 1.3001648626366045 0.0 + + {[DA]|[EG]}{I|L}GK{I|L}{I|L}S{I|L};{[DA]|[EG]}{I|L}{I|L}[KG]{I|L}S{I|L};{[DA]|[EG]}{I|L}GK{I|L}S{I|L}{I|L};{[DA]|[EG]}{I|L}GK{I|L}{I|L}TV;{[DA]|[EG]}{I|L}{I|L}[KG]{I|L}TV;{[DA]|[EG]}{I|L}{I|L}[KG]S{I|L}{I|L};[{I|L}A]DGK{I|L}{I|L}S{I|L};[{I|L}A]DGK{I|L}S{I|L}{I|L};{[VA]|[{I|L}G]}EGK{I|L}{I|L}S{I|L};{[VA]|[{I|L}G]}EGK{I|L}S{I|L}{I|L} 9.704;8.7195;8.4498;7.9905;7.006;6.3261;6.0678;5.8797;5.6152;5.427 +;-;-;-;-;-;-;-;-;- + 1460 + 1 1.362 205447.7 1.0 12274 5013 17277 HBL1_DMSO_200M_050219_2,17289 HBL1_DMSO_200M_050219_2,17289,DALGKLISI True True DALGKLISI 91.718734 465.287432849407 320960928.0 17277.0 ENSG00000089154|ENST00000300648|GCN1 4.748907883961995 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17290 91.723 235.0 446790.0 25 0 101030.0 + 9084 FFFTARTSF 9 77 562.283067094463 1122.551581255726 2 562.2837402224541 MULTI CID FTMS 0 0 0 17277 143678.9375 0.1906805802940819 -2 0.2042083740234375 13 Unmodified _FFFTARTSF_ ENSG00000153179|ENST00000542104|RASSF3;ENST00000540088.1_1_12:65004304-65005331:+|nuORF;nc|ENSG00000153179|Q86WH2-2|RASSF3 35.61225514009592 0.0995432151795903 4 S[R{M(Oxidation (M))|F}]AT{M(Oxidation (M))|F}{M(Oxidation (M))|F}E 8 6 54.373 0.0 0.0 4.8437 0.0 0.0 119.0739994733414 0.0 119.0739994733414 0.0 34.680475292681265 0.0 0.0 0 0.4247425010840047 0.0 1.1989700043360187 0.0 S[R{M(Oxidation (M))|F}]AT{M(Oxidation (M))|F}{M(Oxidation (M))|F}E 4.8437 - 199 1 1.362 82740.6 1.0 12275 5013 17277 HBL1_DMSO_200M_050219_2,17290 HBL1_DMSO_200M_050219_2,17290,FFFTARTSF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17291 91.728 190.0 379260.0 25 0 47354.0 + 20024 RVFEPFTGL 9 107 533.2866340351951 1064.55871513719 2 533.2918578982353 MULTI CID FTMS 0 0 0 17277 135114.4375 0.0485795680026448 -4 0.4462814331054687 14 Unmodified _LIMVTMSTAV_ ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-3|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 26.88365393820708 0.3646707531412818 4 GT{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}TG{I|L} 9 8 46.648 0.0 0.0 4.3819 0.0 0.0 131.09503371406407 0.0 131.09503371406407 0.0 32.67918680081489 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3054621874040891 GT{[QN]|[E{I|L}]|[KN]}P{M(Oxidation (M))|F}TG{I|L} 4.3819 - 1012 1 1.362 64545.1 1.0 12276 5013 17277 HBL1_DMSO_200M_050219_2,17291 HBL1_DMSO_200M_050219_2,17291,LIMVTMSTAV False False RVFEPFTGL 91.728288 533.291857898235 1440312.75 17277.0 ENSG00000187240|ENST00000375735|DYNC2H1;;nc|ENSG00000187240|Q8NCM8-3|DYNC2H1;;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1 6.072747230529785 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17292 91.742 800.0 210230.0 25 0 33399.0 + 35183 SSAEFFVTV 9 108 986.4855595496654 985.4782830830652 1 986.4855834841728 MULTI CID FTMS 0 0 0 17277 128100.625 0.7918297752002141 1 -0.1587066650390625 15 Unmodified _SSAEFFVTV_ ENSG00000102003|ENST00000263233|SYP;ENSG00000163630|ENST00000478300|SYNPR;nc|ENSG00000163630|Q8TBG9|SYNPR 81.61307344734483 0.0171259190214613 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}SS{M(Oxidation (M))|F}VTV 9 4 + 68.24 0.0 0.0 6.9245 6.9245 79.898 0.0 0.0 0.0 2.383030707387676 14.973024840566474 2.383030707387676 2.383030707387676 0 1.064909327626439 0.0 2.1549471895720984 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}SS{M(Oxidation (M))|F}VTV;[{M(Oxidation (M))|F}V]T{M(Oxidation (M))|F}SSVTV;{[CP]|[EA]}{M(Oxidation (M))|F}SS{M(Oxidation (M))|F}VTV;[{M(Oxidation (M))|F}E]ASS{M(Oxidation (M))|F}VTV;{[CP]|[EA]}SS{M(Oxidation (M))|F}{M(Oxidation (M))|F}VTV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{M(Oxidation (M))|F}SVTV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}SSV{M(Oxidation (M))|F}TV;{[CP]|[EA]}S{M(Oxidation (M))|F}S{M(Oxidation (M))|F}VTV;{[CP]|[EA]}{M(Oxidation (M))|F}S{M(Oxidation (M))|F}SVTV;[{M(Oxidation (M))|F}E]AS{M(Oxidation (M))|F}SVTV 6.9245;6.6827;6.619;6.5945;6.5568;6.0744;6.0274;5.9458;5.7689;5.7443 -;-;-;-;-;-;-;-;-;- 3703 1 1.362 112336.4 0.5400000214576721 12277 5013 17277 HBL1_DMSO_200M_050219_2,17292 HBL1_DMSO_200M_050219_2,17292,SSAEFFVTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17293 91.751 520.0 246240.0 25 0 30763.0 + + 4053 NALDKKSNFEL 11 97 640.331200271883 1278.6478476105658 2 640.3311035037041 MULTI CID FTMS 0 0 0 17277 124724.953125 0.2434758459388803 -1 0.093292236328125 16 Unmodified _DALVNTKDYQI_ nc|ENSG00000120899|Q14289-2|PTK2B;ENSG00000120899|ENST00000346049|PTK2B 38.61474834105838 0.2337350513322792 4 DA{I|L}DV{I|L}D[HS]VPN 12 -1 {I|L}D[HS]VPN + + 59.614 24.481 3.2111 4.6622 4.6622 51.162 0.0 0.0 0.0 25.64133994850372 0.0 0.0 0.0 0 1.5 1.154901959985743 0.2887254899964357 0.0 DA{I|L}DV{I|L}D[HS]VPN 4.6622 - 549 + 1 1.362 99952.9 1.0 12278 5013 17277 HBL1_DMSO_200M_050219_2,17293 HBL1_DMSO_200M_050219_2,17293,DALVNTKDYQI False False NALDKKSNFEL 91.751321 640.331103503704 0.0 17277.0 nc|ENSG00000120899|Q14289-2|PTK2B;;ENSG00000120899|ENST00000346049|PTK2B -0.4167010386784871 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17294 91.765 800.0 169840.0 25 0 11541.0 + 10699 FVVREDLMGL 10 135 589.8136990920873 1177.6128452509745 2 589.8131591677666 MULTI CID FTMS 0 0 0 17277 94770.1640625 1.0 0 0.0 17 Unmodified _FVVREDLMGL_ ENSG00000114416|ENST00000357559|FXR1;nc|ENSG00000114416|P51114-2|FXR1;nc|ENSG00000114416|P51114-3|FXR1 49.52724829834842 0.0829255630816734 4 [{M(Oxidation (M))|F}V]VRED{I|L}MG{I|L} 10 0 + 64.104 0.0 0.0 5.4435 5.4435 79.578 0.0 0.0 0.0 16.013544506400805 16.53212513775344 16.013544506400805 6.020599913279625 0 1.1435078169319297 1.2218487496163564 0.3494850021680094 0.0 + + [{M(Oxidation (M))|F}V]VRED{I|L}MG{I|L};[{M(Oxidation (M))|F}V]VRED{I|L}GM{I|L};{NN|[MP]|[D{I|L}]|[EV]}S[PS]V{M(Oxidation (M))|F}{I|L}MG{I|L};{[TV]|[{I|L}S]}N{[QG]|[NA]}V{M(Oxidation (M))|F}{I|L}MG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RD]V{M(Oxidation (M))|F}{I|L}MG{I|L};[{M(Oxidation (M))|F}V][RV]EDSVD{I|L};{[TV]|[{I|L}S]}D[PS]V{M(Oxidation (M))|F}{I|L}MG{I|L};{[VA]|[{I|L}G]}[SG]{[QG]|[NA]}V{M(Oxidation (M))|F}{I|L}MG{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ED{I|L}MG{I|L};{NN|[MP]|[D{I|L}]|[EV]}S[PS]V{M(Oxidation (M))|F}{I|L}GM{I|L} 5.4435;4.9323;4.0837;4.0317;3.9304;3.8995;3.8821;3.7819;3.5894;3.5724 +;-;-;-;-;-;-;-;-;- + 1248 1 1.362 102053.8 0.5400000214576721 12279 5013 17277 HBL1_DMSO_200M_050219_2,17294 HBL1_DMSO_200M_050219_2,17294,FVVREDLMGL True True FVVREDLMGL 91.765155 589.813159167767 543110.75 17277.0 nc|ENSG00000114416|P51114-2|FXR1;;nc|ENSG00000114416|P51114-3|FXR1;;ENSG00000114416|ENST00000357559|FXR1 5.356197198232015 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17295 91.78 800.0 325670.0 25 0 13940.0 + + 24111 TQLPERAIFQI 11 175 657.9026206123435 1313.790688291487 2 657.9039184451103 MULTI CID FTMS 0 0 0 17277 100498.6796875 0.5226579080228636 -1 0.093292236328125 18 Unmodified _LYKLVCPRIPI_ ENST00000524792.5_1_11:108158320-108236232:+|nuORF;ENSG00000149311|ENST00000675843|ATM 18.1463463914782 0.6576820063886638 4 {I|L}G{I|L}DDA{I|L}G{I|L}N 10 -1 57.157 0.0 0.0 4.3506 0.0 0.0 204.18268763705493 125.0724581354125 329.2551457724674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5796896906561032 2.950061205686631 {I|L}G{I|L}DDA{I|L}G{I|L}N 4.3506 - 24482 + 1 1.362 192509.2 0.5400000214576721 12280 5013 17277 HBL1_DMSO_200M_050219_2,17295 HBL1_DMSO_200M_050219_2,17295,LYKLVCPRIPI False False TQLPERAIFQI 91.780165 657.90391844511 1369111.375 17277.0 ENST00000524792.5_1_11:108158320-108236232:+|nuORF;;ENSG00000149311|ENST00000675843|ATM 4.731828848520915 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17296 91.794 800.0 134940.0 25 0 10685.0 + -1 IYYELGEDTIRQAF 14 92 859.4263105287181 1716.838068124236 2 859.4276000857353 MULTI CID FTMS 0 0 0 17277 108376.8046875 1.0 0 0.0 19 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))FC(Carbamidomethyl (C))YKWRRRRT_ ENSG00000179950|ENST00000526683|PUF60;nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60 0.0 0.8751479354844584 4 [Y{I|L}]YE{I|L}GEDT{I|L} 10 -1 90.438 0.0 0.0 5.2677 0.0 0.0 0.0 517.2534095186751 517.2534095186751 54.28911301782435 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.7302046884880937 0.0 [Y{I|L}]YE{I|L}GEDT{I|L} 5.2677 - 1627 + 1 1.362 78123.2 0.6000000238418579 12281 5013 17277 HBL1_DMSO_200M_050219_2,17296 HBL1_DMSO_200M_050219_2,17296,MFCYKWRRRRT False False IYYELGEDTIRQAF 91.794027 859.427600085735 1067544.375 17277.0 ENSG00000179950|ENST00000526683|PUF60;;nc|ENSG00000179950|Q9UHX1-4|PUF60;;nc|ENSG00000179950|Q9UHX1-3|PUF60;;nc|ENSG00000179950|Q9UHX1-5|PUF60;;nc|ENSG00000179950|Q9UHX1-6|PUF60;;nc|ENSG00000179950|Q9UHX1-2|PUF60 8.331385612487793 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17297 91.808 800.0 174060.0 25 0 17205.0 30714 RGGAGGKL 8 113 715.4229016882967 714.4156252216967 1 715.4213134646416 MULTI CID FTMS 0 0 0 17277 102182.6171875 0.9058368739765562 1 -0.1587066650390625 20 Unmodified _RGGAGGKL_ ENST00000320892.10_1_2:7057533-7081179:+|nuORF 5.230669730166228 0.792582437072536 4 EEV{I|L}{I|L}{I|L} 6 7 + 70.662 0.0 0.0 9.8909 9.8909 91.661 0.0 0.0 0.0 7.600135835964913 16.197887582883936 7.600135835964913 7.600135835964913 0 0.9802046884880938 0.8239087409443188 1.4204841662593095 0.0 EEV{I|L}{I|L}{I|L};{I|L}{I|L}DE{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}D{I|L}{I|L}{I|L};EE{I|L}V{I|L}{I|L};{I|L}{I|L}ED{I|L}{I|L};[{I|L}V]EE{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}VE{I|L}{I|L};{I|L}{I|L}D{I|L}E{I|L} 9.8909;8.8271;8.6444;8.1731;7.9342;7.8238;7.7379;7.3337;6.8623;6.8569 -;-;-;-;-;-;-;-;-;- 518 1 1.362 103830.9 0.6100000143051147 12282 5013 17277 HBL1_DMSO_200M_050219_2,17297 HBL1_DMSO_200M_050219_2,17297,RGGAGGKL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17299 91.812 0.91 56835000.0 25 0 8432000.0 + 868 AEVDVNQKLLL 11 71 621.3575757175456 1240.7005985018911 2 621.3602172732353 MULTI CID FTMS 0 0 0 17298 59782832.0 1.0 0 0.0 1 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 20.580933911654288 0.6070398941446662 4 {[DA]|[EG]}{I|L}DVA{I|L}W{I|L}{I|L}{I|L} 11 -1 + 77.599 0.0 0.0 6.2545 6.2545 76.739 0.0 0.0 0.0 13.521825181113629 9.797513843253569 9.797513843253569 1.989700043360188 0 2.242992819099939 1.6989700043360187 0.0 0.0 {[DA]|[EG]}{I|L}DVA{I|L}W{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}W{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}GW{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}G{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{[DA]|[EG]}{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}{[DA]|[EG]}{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}{[DA]|[EG]}{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}G{[DA]|[EG]}{I|L}{I|L}{I|L} 6.2545;6.0941;6.0119;5.9728;5.8515;5.7302;5.5187;5.3584;5.2761;5.237 -;-;-;-;-;-;-;-;-;- 2213 1 1.36 44357.1 1.0 12283 5014 17298 HBL1_DMSO_200M_050219_2,17299 HBL1_DMSO_200M_050219_2,17299,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17300 91.813 30.0 3395600.0 25 0 1309100.0 + 10184 FQDEINWRL 9 51 610.8073067661412 1219.6000605990823 2 610.8074218630791 MULTI CID FTMS 0 0 0 17298 1126197.625 0.5412903267280627 1 -0.0736770629882812 2 Unmodified _FQDEINWRL_ ENSG00000102226|ENST00000377107|USP11;ENST00000469080.5_1_X:47092634-47106681:+|nuORF;nc|ENSG00000102226|P51784|USP11 70.33199760932243 0.0209706178985989 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DERR{I|L}QE 9 5 + 69.777 0.0 0.0 5.7213 5.7213 77.781 0.0 0.0 0.0 11.433852901485295 11.433852901485295 11.433852901485295 3.667053245199625 0 1.0 1.2218487496163564 0.4247425010840047 1.6989700043360187 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DERR{I|L}QE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RR{I|L}EDQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DERR{I|L}[AG]E;{M(Oxidation (M))|F}QDE{I|L}NW[R{I|L}];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RR{I|L}ED[AG]E;{M(Oxidation (M))|F}[AG]DE{I|L}NW[R{I|L}];{M(Oxidation (M))|F}QDE{I|L}GGW[R{I|L}];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RR{I|L}WWE;{M(Oxidation (M))|F}[AG]DE{I|L}GGW[R{I|L}];{M(Oxidation (M))|F}WW{I|L}NW[R{I|L}] 5.7213;5.4206;4.9663;4.7838;4.6656;4.0288;4.0288;3.3123;3.2773;1.8555 -;-;-;+;-;-;-;-;-;- + 105 1 1.36 82069.3 1.0 12284 5014 17298 HBL1_DMSO_200M_050219_2,17300 HBL1_DMSO_200M_050219_2,17300,FQDEINWRL True True FQDEINWRL 91.813398 610.807421863079 33581348.0 17298.0 nc|ENSG00000102226|P51784|USP11;;ENST00000469080.5_1_X:47092634-47106681:+|nuORF;;ENSG00000102226|ENST00000377107|USP11 6.437960624694824 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17301 91.815 13.0 2510300.0 25 0 212210.0 + 20485 LLLDVPTAAV 10 61 506.3079274223521 1010.6013019115044 2 506.3081848025322 MULTI CID FTMS 0 0 0 17298 3952578.75 0.8453910104162289 -1 0.1587066650390625 3 Unmodified _LLLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 20.453626601364224 0.5043500229302764 4 {I|L}{I|L}D{I|L}V 5 6 31.655 0.0 0.0 3.1323 0.0 0.0 0.0 454.23051054230456 454.23051054230456 10.686362358410122 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {I|L}{I|L}D{I|L}V 3.1323 - 55 1 1.36 33705.0 1.0 12285 5014 17298 HBL1_DMSO_200M_050219_2,17301 HBL1_DMSO_200M_050219_2,17301,LLLDVPTAAV False True LLLDVPTAAV 91.814577 506.308184802532 45115168.0 17298.0 ENSG00000216490|ENST00000407280|IFI30 3.5801977713902797 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17302 91.816 49.0 1279700.0 25 0 151600.0 + 10159 FPYAFKEVI 9 99 557.3024106264426 1112.590268319685 2 557.3029052615166 MULTI CID FTMS 0 0 0 17298 976450.9375 0.9776810435680042 1 -0.0736770629882812 4 Unmodified _FPYAFKEVI_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 45.69961567697781 0.0497987121815769 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F}K{M(Oxidation (M))|F}[{I|L}V]E 9 4 + 59.177 0.0 0.0 5.3188 5.3188 75.877 0.0 0.0 0.0 7.299928374540975 4.934239665113722 4.934239665113722 3.534087492996392 0 0.8494850021680094 2.0 0.5610312860818771 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F}K{M(Oxidation (M))|F}[{I|L}V]E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YAK{M(Oxidation (M))|F}[{I|L}V]E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{M(Oxidation (M))|F}K[YV]PE;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{M(Oxidation (M))|F}K{M(Oxidation (M))|F}[{I|L}V]E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}AK[YV]PE;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}AK{M(Oxidation (M))|F}[{I|L}V]E;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{M(Oxidation (M))|F}K{M(Oxidation (M))|F}[{I|L}V]E;{M(Oxidation (M))|F}P[YV]KAE{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}[{I|L}V]{M(Oxidation (M))|F}KAE{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}PK{M(Oxidation (M))|F}[{I|L}V]E 5.3188;5.0012;4.6627;4.3922;4.3451;4.0745;3.2108;3.0846;2.8141;2.6696 -;-;-;-;-;-;-;-;-;- 1600 1 1.36 57668.7 1.0 12286 5014 17298 HBL1_DMSO_200M_050219_2,17302 HBL1_DMSO_200M_050219_2,17302,FPYAFKEVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17303 91.817 40.0 1788800.0 25 0 205490.0 35702 SVFQRLLP 8 79 480.2877806194131 0 480.2876464724541 PEAK CID FTMS 0 0 0 17298 971404.75 0.1664511357184415 -5 0.6049880981445312 5 Unmodified _SVFQRLLP_ ENSG00000189184|ENST00000344876|PCDH18;nc|ENSG00000189184|Q9HCL0-2|PCDH18 32.116972079565 0.2111542247894177 4 {M(Oxidation (M))|F}Q{I|L}R 4 5 26.402 0.0 0.0 2.7544 0.0 0.0 186.09835859987544 225.12502466373283 411.2233832636083 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.7742275032520141 {M(Oxidation (M))|F}Q{I|L}R 2.7544 - 43 + 1 1.36 60675.6 1.0 12287 5014 17298 HBL1_DMSO_200M_050219_2,17303 HBL1_DMSO_200M_050219_2,17303,SVFQRLLP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17304 91.818 41.0 559620.0 25 0 50654.0 + 3801 DAIHRYAPHSL 11 46 427.22368267500656 1278.6492186252196 3 427.2236205935478 MULTI CID FTMS 0 0 0 17298 791800.3125 1.0 0 0.0 6 Unmodified _DAIHRYAPHSL_ REV__ENSG00000197959|ENST00000627582|DNM3;REV__nc|ENSG00000197959|Q9UQ16-2|DNM3;REV__nc|ENSG00000197959|Q9UQ16-4|DNM3;REV__nc|ENSG00000197959|Q9UQ16-5|DNM3;REV__nc|ENSG00000197959|Q9UQ16|DNM3 10.150570793230772 0.8240029794358671 4 {[DA]|[EG]}{I|L}D 4 -1 40.005 0.0 0.0 3.1287 0.0 0.0 0.0 861.4522724022294 861.4522724022294 20.400990676322905 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[DA]|[EG]}{I|L}D 3.1287 - 14 + 1 1.36 28451.5 1.0 12288 5014 17298 HBL1_DMSO_200M_050219_2,17304 HBL1_DMSO_200M_050219_2,17304,DAIHRYAPHSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17305 91.82 69.0 502520.0 25 0 87366.0 + -1 LLIMCVVW 8 73 350.52344362031704 1048.548501461151 3 350.5231811404228 MULTI CID FTMS 0 0 0 17298 733450.5625 1.0 0 0.0 7 Carbamidomethyl (C),Oxidation (M) _LLIM(Oxidation (M))C(Carbamidomethyl (C))VVW_ REV__ENST00000477542.5_1_3:48415047-48423401:+|nuORF 12.531546534597751 0.7257836412119636 4 {I|L}{I|L}{I|L} 3 -1 45.49 0.0 0.0 4.3383 0.0 0.0 0.0 706.2748931348178 706.2748931348178 27.44219050288216 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L}{I|L} 4.3383 + + 59 + 1 1.36 33551.4 1.0 12289 5014 17298 HBL1_DMSO_200M_050219_2,17305 HBL1_DMSO_200M_050219_2,17305,LLIMCVVW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17306 91.821 67.0 1044600.0 25 0 181450.0 + + 20065 IITDLLRSV 9 82 515.3183072212272 1028.6220615092543 2 515.3190795779228 MULTI CID FTMS 0 0 0 17298 699034.5 1.0 0 0.0 8 Unmodified _LITDLLVRS_ ENSG00000162613|ENST00000370768|FUBP1;nc|ENSG00000162613|Q96AE4-2|FUBP1 28.49450938151212 0.1686335738423394 4 {I|L}{I|L}TD{I|L}{I|L} 6 -1 68.25 0.0 0.0 6.6351 0.0 0.0 0.0 357.1899508111938 357.1899508111938 52.53714405160309 0.0 0.0 0.0 0 0.75 2.0 0.5 0.0 {I|L}{I|L}TD{I|L}{I|L} 6.6351 + + 251 + 1 1.36 57128.1 1.0 12290 5014 17298 HBL1_DMSO_200M_050219_2,17306 HBL1_DMSO_200M_050219_2,17306,LITDLLVRS False False IITDLLRSV 91.821488 515.319079577923 10023006.0 17298.0 ENSG00000162613|ENST00000370768|FUBP1;;nc|ENSG00000162613|Q96AE4-2|FUBP1 2.9801058769226074 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17307 91.823 42.0 736550.0 25 0 107890.0 + 14703 IIWVCLCSI 9 62 525.2801502825098 0 525.2798339724541 PEAK CID FTMS 0 0 0 17298 638838.6875 1.0 0 0.0 9 Unmodified _IIWVCLCSI_ REV__ENSG00000104133|ENST00000261866|SPG11;REV__nc|ENSG00000104133|Q96JI7-2|SPG11;REV__nc|ENSG00000104133|Q96JI7-3|SPG11 8.593279151180031 0.3284076903191179 4 {I|L}D 2 -1 10.969 0.0 0.0 1.0461 0.0 0.0 270.19174920871177 547.2200727924654 817.4118220011771 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D 1.0461 - 8 + 1 1.36 32305.5 1.0 12291 5014 17298 HBL1_DMSO_200M_050219_2,17307 HBL1_DMSO_200M_050219_2,17307,IIWVCLCSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17308 91.824 62.0 860300.0 25 0 58391.0 -1 IIMAYTTEFV 10 81 602.3007589691401 1202.5869650050802 2 602.3007690310478 MULTI CID FTMS 0 0 0 17298 541964.8125 0.7601654624380069 -1 0.1587066650390625 10 Oxidation (M) _IIM(Oxidation (M))AYTTEFV_ ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A 15.847184025352805 0.5816416552707754 4 {[QN]|[E{I|L}]|[KN]}[MN]E 5 -1 24.207 0.0 0.0 2.0129 0.0 0.0 0.0 583.321844960028 583.321844960028 0.8006678899717876 0.0 0.0 0.0 0 0.25 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[MN]E 2.0129 - 287 + 1 1.36 43572.0 1.0 12292 5014 17298 HBL1_DMSO_200M_050219_2,17308 HBL1_DMSO_200M_050219_2,17308,IIMAYTTEFV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17309 91.826 87.0 896300.0 25 0 106500.0 + 43270 WGGVLIVYI 9 88 510.29798953635947 1018.581426139519 2 510.2985412478447 MULTI CID FTMS 0 0 0 17298 440405.90625 0.486521013353671 1 -0.0736770629882812 11 Unmodified _WGGVLIVYI_ REV__ENSG00000166881|ENST00000300128|NEMP1;REV__nc|ENSG00000166881|O14524-2|NEMP1 20.871210003555333 0.2717241269066626 4 [YV]{I|L}H{I|L}VY{I|L} 8 -1 + 45.195 0.0 0.0 4.4371 4.4371 83.905 0.0 0.0 0.0 2.9446387303474 14.840610492820652 2.9446387303474 33.15675328855981 0 1.0994850021680094 1.2218487496163564 0.0 0.0 [YV]{I|L}H{I|L}VY{I|L};[R{I|L}][KT][EP]Y{I|L};[R{I|L}][KT]Y[EP]{I|L};[R{I|L}]Y[KT][EP]{I|L} 4.4371;1.1819;0.54191;0.54191 -;-;-;- 506 1 1.36 65330.3 1.0 12293 5014 17298 HBL1_DMSO_200M_050219_2,17309 HBL1_DMSO_200M_050219_2,17309,WGGVLIVYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17310 91.828 50.0 981810.0 25 0 74711.0 + 32468 SAHLQWMVV 9 83 535.7760925212581 1069.537632109316 2 535.7760497927666 MULTI CID FTMS 0 0 0 17298 441437.84375 0.8944904220071574 -1 0.1587066650390625 12 Unmodified _SAHLQWMVV_ ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28;nc|ENSG00000108107|P46779-4|RPL28;nc|ENSG00000108107|P46779-5|RPL28 17.11289562659939 0.3734572693229295 4 {I|L}QWMVV 6 3 31.688 0.0 0.0 2.9627 0.0 0.0 295.12813002754064 0.0 295.12813002754064 0.0 16.202972028968716 0.0 0.0 0 1.079689690656103 0.0 0.0 0.0 + {I|L}QWMVV 2.9627 + + 287 1 1.36 49940.3 1.0 12294 5014 17298 HBL1_DMSO_200M_050219_2,17310 HBL1_DMSO_200M_050219_2,17310,SAHLQWMVV False True SAHLQWMVV 91.827511 535.776049792767 8435295.0 17298.0 nc|ENSG00000108107|P46779-3|RPL28;;ENSG00000108107|ENST00000344063|RPL28;;nc|ENSG00000108107|P46779-4|RPL28;;nc|ENSG00000108107|P46779-2|RPL28;;nc|ENSG00000108107|P46779-5|RPL28 3.908600171407064 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17311 91.831 196.0 376240.0 25 0 80944.0 -1 0 80 357.74178102679934 713.4690091203987 2 357.7415649294853 MULTI CID FTMS 0 0 0 17298 336798.3125 0.6407860560792872 1 -0.0736770629882812 13 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}{I|L}K 6 -1 + 58.038 0.0 0.0 8.1346 8.1346 80.729 0.0 0.0 0.0 26.478174818886373 1.249387366082999 1.249387366082999 1.249387366082999 0 0.6549471895720985 2.0 0.0 0.2614393726401688 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}{I|L}K;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}K{I|L};{I|L}{I|L}[K{I|L}]D{I|L} 8.1346;7.9595;1.1704 -;-;- 50 + 1 1.36 61593.1 1.0 12295 5014 17298 HBL1_DMSO_200M_050219_2,17311 HBL1_DMSO_200M_050219_2,17311, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17312 91.835 215.0 654570.0 25 0 76340.0 + 4379 DAVKFFVAV 9 151 498.2819095594391 994.5492661856782 2 498.2819091677666 MULTI CID FTMS 0 0 0 17298 342826.125 0.4057321272854995 -2 0.2519989013671875 14 Unmodified _DAVKFFVAV_ ENSG00000008294|ENST00000262013|SPAG9;nc|ENSG00000008294|O60271-2|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-9|SPAG9 38.17557092003332 0.0854718145212029 4 {[DA]|[EG]}VK{M(Oxidation (M))|F}{M(Oxidation (M))|F}VAV 9 0 + 52.303 0.0 0.0 5.2589 5.2589 72.422 0.0 0.0 0.0 6.020599913279625 9.889917747712644 6.020599913279625 1.7911955237836992 0 1.035666875892183 1.3979400086720375 0.2614393726401688 0.0 + + {[DA]|[EG]}VK{M(Oxidation (M))|F}{M(Oxidation (M))|F}VAV;{[DA]|[EG]}V{M(Oxidation (M))|F}K{M(Oxidation (M))|F}VAV;[DV]AK{M(Oxidation (M))|F}{M(Oxidation (M))|F}VAV;[QP]APKADVAV;{[VA]|[{I|L}G]}DK{M(Oxidation (M))|F}{M(Oxidation (M))|F}VAV;[DV]A{M(Oxidation (M))|F}K{M(Oxidation (M))|F}VAV;{[VA]|[{I|L}G]}D{M(Oxidation (M))|F}K{M(Oxidation (M))|F}VAV;{[DA]|[EG]}VK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}AV;{NN|[MP]|[D{I|L}]|[EV]}GK{M(Oxidation (M))|F}{M(Oxidation (M))|F}VAV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VKADVAV 5.2589;5.0788;4.6536;4.5749;4.5348;4.4735;4.3547;4.2118;4.1924;4.0818 +;-;-;-;-;-;-;-;-;- + 5000 1 1.36 105815.8 1.0 12296 5014 17298 HBL1_DMSO_200M_050219_2,17312 HBL1_DMSO_200M_050219_2,17312,DAVKFFVAV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17313 91.838 112.0 441190.0 25 0 58905.0 + 1371 ALADDDFLTV 10 88 540.2663829014775 1078.518212869755 2 540.2668334841728 MULTI CID FTMS 0 0 0 17298 322242.3125 0.2996428376737444 1 -0.0736770629882812 15 Unmodified _ALADDDFLTV_ ENSG00000104738|ENST00000649973|MCM4 22.65808497894818 0.4596126414678359 4 {[TV]|[{I|L}S]}{I|L} 3 8 21.427 0.0 0.0 1.9867 0.0 0.0 0.0 762.2948906864143 762.2948906864143 0.4845500650402812 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}{I|L} 1.9867 - 184 1 1.36 45772.5 1.0 12297 5014 17298 HBL1_DMSO_200M_050219_2,17313 HBL1_DMSO_200M_050219_2,17313,ALADDDFLTV False True ALADDDFLTV 91.837696 540.266833484173 8722591.0 17298.0 ENSG00000104738|ENST00000649973|MCM4 5.156639258066813 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17314 91.843 275.0 809100.0 25 0 96431.0 + 35832 SVLDDNKLLTL 11 133 615.8508973479269 1229.6872417626537 2 615.8524047732353 MULTI CID FTMS 0 0 0 17298 298410.8125 0.0487923692578661 -3 0.3629150390625 16 Unmodified _SVLDDNKLLTL_ ENSG00000197102|ENST00000360184|DYNC1H1 84.73772076367982 0.0041332124498458 4 [VS]{I|L}[NG]D{I|L}[VS]{I|L}T{I|L} 12 5 + 80.764 0.0 0.0 6.5679 6.5679 75.311 0.0 0.0 0.0 8.407128246896306 5.942124970647029 5.942124970647029 0.6075951217157467 0 1.7302046884880935 2.0 0.9876954943324544 1.055462187404089 [VS]{I|L}[NG]D{I|L}[VS]{I|L}T{I|L};[VS]{I|L}[NG]D{I|L}{I|L}[VS]T{I|L};[VS][NG]D{I|L}{I|L}[VS]{I|L}T{I|L};[VS][NG]D{I|L}{I|L}{I|L}[VS]T{I|L};[VS]{I|L}[NG]D{I|L}{I|L}TVS{I|L};[VS]{I|L}[NG]D{I|L}TVVT{I|L};[VS]{I|L}[NG]{I|L}D[VS]{I|L}T{I|L};[VS]{I|L}[NG]{I|L}D{I|L}[VS]T{I|L};[VS][NG]{I|L}D{I|L}[VS]{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}DD{I|L}{I|L}[VS]{I|L}T{I|L} 6.5679;6.5185;6.3163;6.2668;6.0769;6.0586;6.0059;5.9564;5.8888;5.8842 -;-;-;-;-;-;-;-;-;- 6372 1 1.36 164696.6 1.0 12298 5014 17298 HBL1_DMSO_200M_050219_2,17314 HBL1_DMSO_200M_050219_2,17314,SVLDDNKLLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17315 91.848 273.0 503060.0 25 0 102020.0 + 11164 GELFLQKTQSI 11 114 632.3481697758767 1262.6817866185534 2 632.3484985232353 MULTI CID FTMS 0 0 0 17298 258376.734375 1.0 0 0.0 17 Unmodified _GELFLQKTQSI_ REV__ENSG00000066084|ENST00000301180|DIP2B 34.93206674587334 0.2904649469012649 4 DA{I|L}DVATM 8 -1 69.282 0.0 0.0 5.4869 0.0 0.0 0.0 443.30039392642817 443.30039392642817 40.47762039588408 0.0 0.0 0.0 0 1.1421590589602533 1.3979400086720375 0.3807196863200844 0.0 DA{I|L}DVATM 5.4869 - 383 + 1 1.36 108255.7 1.0 12299 5014 17298 HBL1_DMSO_200M_050219_2,17315 HBL1_DMSO_200M_050219_2,17315,GELFLQKTQSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17316 91.862 800.0 113230.0 25 0 3773.8 -1 0 105 1164.538671535127 3490.594185205581 3 1165.539965808392 MULTI CID FTMS 0 0 0 17298 210866.03125 0.2715714060334238 4 -0.436737060546875 18 4 {M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 11 -1 21.648 0.0 0.0 0.62017 0.0 0.0 2251.0696859963346 0.0 2251.0696859963346 0.0 10.756985571868151 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 0.62017 - 1345 + 1 1.36 58039.1 0.8199999928474426 12300 5014 17298 HBL1_DMSO_200M_050219_2,17316 HBL1_DMSO_200M_050219_2,17316, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17317 91.876 800.0 158020.0 25 0 6387.7 + -1 NKLVWLVCALL 11 135 664.89374836456 1327.77294379592 2 664.8936035037041 MULTI CID FTMS 0 0 0 17298 219464.359375 1.0 0 0.0 19 Carbamidomethyl (C) _NKLVWLVC(Carbamidomethyl (C))ALL_ REV__ENSG00000130158|ENST00000294618|DOCK6;REV__ENST00000592403.1_1_19:11327586-11327727:-|nuORF 13.042465956692816 0.7638483625850725 4 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}N 12 -1 85.563 0.0 0.0 6.4441 0.0 0.0 0.0 101.0730896301574 101.0730896301574 41.89510361059405 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.9049471895720984 1.3226825097560422 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}N 6.4441 - 60007 1 1.36 108702.0 0.9300000071525574 12301 5014 17298 HBL1_DMSO_200M_050219_2,17317 HBL1_DMSO_200M_050219_2,17317,NKLVWLVCALL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17318 91.882 332.0 333250.0 25 0 54083.0 + 16493 KALGDQILFV 10 114 552.3272122386657 0 552.3274413943291 PEAK CID FTMS 0 0 0 17298 204190.40625 0.8443128187448733 -2 0.2519989013671875 20 Unmodified _KALGDQILFV_ ENSG00000197265|ENST00000355904|GTF2E2;ENST00000522833.5_1_8:30442658-30469842:-|nuORF 36.506200033944 0.1478449698601293 4 {I|L}{I|L}KAGD 6 8 37.774 0.0 0.0 3.4258 0.0 0.0 264.1475848103407 238.1205996149047 502.2681844252454 0.0 0.0 0.0 0.0 0 0.5 0.0 0.6989700043360187 0.7614393726401688 {I|L}{I|L}KAGD 3.4258 - 279 + 1 1.36 86438.7 1.0 12302 5014 17298 HBL1_DMSO_200M_050219_2,17318 HBL1_DMSO_200M_050219_2,17318,KALGDQILFV False True KALGDQILFV 91.88155 552.327441394329 2438918.25 17298.0 ENST00000522833.5_1_8:30442658-30469842:-|nuORF;;ENSG00000197265|ENST00000355904|GTF2E2 4.428555488586426 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17320 91.886 87.0 1129300.0 25 0 196480.0 20434 LLIFTEGAAV 10 67 517.2984992901263 1032.5824456470525 2 517.2992431521416 MULTI CID FTMS 0 0 0 17319 772250.3125 1.0 0 0.0 1 Unmodified _LLIFTEGAAV_ ENSG00000165204|ENST00000277309|OR1K1 30.63653989081413 0.2803493085145199 4 {I|L}{I|L}{I|L}DV[YQ]AV 9 5 + 82.828 0.0 0.0 8.0214 8.0214 83.877 0.0 0.0 0.0 36.47817481888637 9.890139315225667 9.890139315225667 3.0102999566398125 0 1.5994850021680094 2.0 0.0 0.0 {I|L}{I|L}{I|L}DV[YQ]AV;{I|L}{I|L}VEV[YQ]AV;{I|L}{I|L}{I|L}DV[YQ]G{I|L};{I|L}{I|L}VEV[YQ]G{I|L} 8.0214;7.7299;7.0636;6.7721 -;-;-;- 100 + 1 1.36 79754.3 1.0 12303 5015 17319 HBL1_DMSO_200M_050219_2,17320 HBL1_DMSO_200M_050219_2,17320,LLIFTEGAAV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17321 91.89 216.0 242900.0 25 0 29507.0 + + -1 SLIEKLWQT 9 87 559.2401648556685 1116.4657767781368 2 559.2394286990166 MULTI CID FTMS 0 0 0 17319 82074.65625 0.4219842097487533 1 -0.1324234008789062 2 Carbamidomethyl (C) _ALGC(Carbamidomethyl (C))EQCHSL_ nc|ENSG00000080298|P48380-3|RFX3;ENSG00000080298|ENST00000617270|RFX3;nc|ENSG00000080298|P48380-2|RFX3 11.640296217721598 0.652229146672156 4 {[QN]|[E{I|L}]|[KN]}K{I|L}WQ 6 -1 29.87 0.0 0.0 2.6754 0.0 0.0 0.0 315.99407202643687 315.99407202643687 6.598548868470779 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[QN]|[E{I|L}]|[KN]}K{I|L}WQ 2.6754 - 572 1 1.36 46287.6 1.0 12304 5015 17319 HBL1_DMSO_200M_050219_2,17321 HBL1_DMSO_200M_050219_2,17321,ALGCEQCHSL False False SLIEKLWQT 91.889985 559.2427 1191370.625 17319.0 nc|ENSG00000080298|P48380-3|RFX3;;ENSG00000080298|ENST00000617270|RFX3;;nc|ENSG00000080298|P48380-2|RFX3 4.328934192657471 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17322 91.892 62.0 998470.0 25 0 94057.0 + 10685 FVVDEVHLI 9 106 535.7976560668055 1069.580759200411 2 536.2998535037041 MULTI CID FTMS 0 0 0 17319 525244.5625 0.6520498855913717 3 -0.3630599975585937 3 Unmodified _FVVDEVHLI_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000480242.1_1_2:96950056-96950410:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 23.1484247019978 0.2366544122328345 4 [H{I|L}]DDV{I|L} 6 6 23.153 0.0 0.0 2.1647 0.0 0.0 0.0 374.2074614456759 374.2074614456759 0.2334196030246005 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 [H{I|L}]DDV{I|L} 2.1647 - 438 1 1.36 57082.2 1.0 12305 5015 17319 HBL1_DMSO_200M_050219_2,17322 HBL1_DMSO_200M_050219_2,17322,FVVDEVHLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17323 91.893 88.0 840530.0 25 0 140860.0 + 20183 LIYSGKLLL 9 95 509.82188692284745 1017.6292209124948 2 510.3272277712822 MULTI CID FTMS 0 0 0 17319 356692.90625 1.0 0 0.0 4 Unmodified _LLACFLILI_ nc|ENSG00000051108|Q15011-2|HERPUD1;ENST00000562914.1_1_16:56966069-56969248:+|nuORF;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-3|HERPUD1;ENSG00000051108|ENST00000439977|HERPUD1;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;ENST00000569569.5_1_16:56966069-56970730:+|nuORF;nc|ENSG00000051108|Q15011-4|HERPUD1 28.17323086031832 0.1727213568982648 4 [KG]SY{I|L}{I|L}{I|L}[KP] 9 7 + 23.338 0.0 0.0 2.2934 2.2934 61.604 0.0 0.0 0.0 2.2430121199290944 1.576695251796302 1.576695251796302 0.7918124604762511 0 0.0 0.0 0.3494850021680094 0.0 [KG]SY{I|L}{I|L}{I|L}[KP];[KG]{I|L}SY{I|L}{I|L}[KP];[KG]S{I|L}Y{I|L}{I|L}[KP];{I|L}{I|L}[YR]D{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}D{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[KS]{I|L}{I|L}[KP];[KG]{I|L}S{I|L}Y{I|L}[KP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVD{I|L}{I|L}{I|L}{I|L};[KG]S{I|L}{I|L}Y{I|L}[KP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WK]{I|L}{I|L}[KP] 2.2934;2.2156;2.1203;1.8426;1.5918;1.5562;1.4033;1.3409;1.308;1.2155 -;-;-;-;-;-;-;-;-;- 1014 1 1.36 61553.1 1.0 12306 5015 17319 HBL1_DMSO_200M_050219_2,17323 HBL1_DMSO_200M_050219_2,17323,LLACFLILI False False LIYSGKLLL 91.893473 510.327227771282 2300704.25 17319.0 nc|ENSG00000051108|Q15011-2|HERPUD1;;ENST00000562914.1_1_16:56966069-56969248:+|nuORF;;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;;nc|ENSG00000051108|Q15011-3|HERPUD1;;ENSG00000051108|ENST00000439977|HERPUD1;;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;;ENST00000569569.5_1_16:56966069-56970730:+|nuORF;;nc|ENSG00000051108|Q15011-4|HERPUD1 0.1073651512463887 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17324 91.896 125.0 801640.0 25 0 85811.0 + 27745 PLNLTLVPL 9 88 490.3135492893367 978.6125456454736 2 490.3164245486259 MULTI CID FTMS 0 0 0 17319 296340.3125 0.4519450064763808 -1 0.0736770629882812 5 Unmodified _PLNLTLVPL_ ENSG00000006534|ENST00000342456|ALDH3B1;nc|ENSG00000006534|P43353-2|ALDH3B1 39.957323273325 0.0756908302845263 4 [VP]{I|L}[QT]{I|L}PV{I|L} 9 5 + 42.109 0.0 0.0 4.303 4.303 69.027 0.0 0.0 0.0 3.3994806169434995 12.362942588279113 3.3994806169434995 2.04628427264403 0 1.395701298008806 1.3979400086720375 0.3252574989159953 0.3807196863200844 [VP]{I|L}[QT]{I|L}PV{I|L};[VP]{I|L}SAA{I|L}PV{I|L};[VP][WR]{I|L}PV{I|L};[{I|L}P]V[QT]{I|L}PV{I|L};[VP]{I|L}S[RV]PV{I|L};[{I|L}P]VSAA{I|L}PV{I|L};[{I|L}P]VS[RV]PV{I|L};[VP]{I|L}[WR]PV{I|L};[{I|L}P]V[WR]PV{I|L} 4.303;4.0939;4.0229;3.9556;3.828;3.7465;3.4806;3.3212;2.9738 -;-;-;-;-;-;-;-;- 183 1 1.36 82761.5 1.0 12307 5015 17319 HBL1_DMSO_200M_050219_2,17324 HBL1_DMSO_200M_050219_2,17324,PLNLTLVPL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17325 91.899 164.0 476500.0 25 0 46201.0 20341 LLFLILANG 9 63 487.3068622324066 972.5991715316133 2 487.8055297732353 MULTI CID FTMS 0 0 0 17319 319596.875 0.5885043274526441 -10 1.1182708740234375 6 Unmodified _LLFLILANG_ ENSG00000013563|ENST00000369807|DNASE1L1 11.640296217721598 0.521594087909532 4 {I|L}{I|L}{I|L}P[SG] 6 5 28.416 0.0 0.0 2.9217 0.0 0.0 374.2279581612074 0.0 374.2279581612074 0.0 1.7339374311232802 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L}P[SG] 2.9217 - 65 1 1.36 67931.6 1.0 12308 5015 17319 HBL1_DMSO_200M_050219_2,17325 HBL1_DMSO_200M_050219_2,17325,LLFLILANG False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17326 91.902 140.0 415490.0 25 0 67200.0 + 39651 ALHDILTEI 9 95 512.7869144333011 1023.5592759334024 2 512.7867919802666 MULTI CID FTMS 0 0 0 17319 231357.625 0.7818247368746754 -1 0.0736770629882812 7 Unmodified _VEALHTEIL_ ENSG00000111445|ENST00000454402|RFC5;nc|ENSG00000111445|P40937-2|RFC5 27.628801355627647 0.1796483985696185 4 [HD]{I|L}A{I|L}TE{I|L}{I|L} 9 4 + 30.908 0.0 0.0 3.0197 3.0197 75.97 0.0 0.0 0.0 3.6527926935124135 11.444021793654858 3.6527926935124135 9.542425094393248 0 0.0 0.0 0.805462187404089 0.0 [HD]{I|L}A{I|L}TE{I|L}{I|L};[HD]{I|L}{I|L}ATE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HV]ATE{I|L}{I|L};[VP]E[VP]EE{I|L}{I|L};{[DS]|[MA]|[CV]|TT}[Y{I|L}]ATE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[HV]A[VP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.0197;2.0874;1.5004;0.89365;0.40681;0.057952 -;-;-;-;-;- 434 1 1.36 49282.7 1.0 12309 5015 17319 HBL1_DMSO_200M_050219_2,17326 HBL1_DMSO_200M_050219_2,17326,VEALHTEIL False False ALHDILTEI 91.902066 512.786791980267 2509677.25 17319.0 ENSG00000111445|ENST00000454402|RFC5;;nc|ENSG00000111445|P40937-2|RFC5 2.7262674967447915 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17327 91.916 800.0 157560.0 25 0 17875.0 31534 RQKRKVWVQSL 11 153 476.62402087245096 1426.8502332175528 3 476.9589721560478 MULTI CID FTMS 0 0 0 17319 167334.9375 0.5128754807802363 3 -0.3630599975585937 8 Unmodified _RQKRKVWVQSL_ ENSG00000115966|ENST00000264110|ATF2;nc|ENSG00000115966|P15336-2|ATF2;nc|ENSG00000115966|P15336-4|ATF2;nc|ENSG00000115966|P15336-5|ATF2 4.11662792887243 0.8557254166428417 4 S{I|L} 2 9 12.105 0.0 0.0 0.84835 0.0 0.0 1208.7229881997778 0.0 1208.7229881997778 0.0 1.7872138866137632 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + S{I|L} 0.84835 + + 1129 + 1 1.36 106469.2 0.7200000286102295 12310 5015 17319 HBL1_DMSO_200M_050219_2,17327 HBL1_DMSO_200M_050219_2,17327,RQKRKVWVQSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17328 91.93 800.0 235150.0 25 0 28162.0 + 44015 YIFSGQIRL 9 142 548.811182675787 1095.607812418374 2 548.8112060427666 MULTI CID FTMS 0 0 0 17319 153361.421875 1.0 0 0.0 9 Unmodified _YIFSGQIRL_ ENSG00000261609|ENST00000648994|GAN 56.17704186161178 0.0281986971544335 4 Y{I|L}{M(Oxidation (M))|F}SGQ{I|L}R{I|L} 9 0 + 80.641 0.0 0.0 7.3604 7.3604 90.398 0.0 0.0 0.0 64.19760279133854 9.87765543582988 9.87765543582988 9.208187539523747 0 0.9247425010840048 2.0 0.3252574989159953 0.3807196863200844 + + Y{I|L}{M(Oxidation (M))|F}SGQ{I|L}R{I|L};Y{I|L}{M(Oxidation (M))|F}SG[AG]{I|L}R{I|L};Y{I|L}PHGQ{I|L}R{I|L};Y{I|L}PHG[AG]{I|L}R{I|L};Y{I|L}{M(Oxidation (M))|F}{I|L}[WK]N{I|L};Y{I|L}{M(Oxidation (M))|F}{I|L}[WK]QV;Y{I|L}[YQ]Q{I|L}R{I|L};Y{I|L}{I|L}{M(Oxidation (M))|F}[WK]N{I|L};Y{I|L}{I|L}{M(Oxidation (M))|F}[WK]QV;Y{I|L}{M(Oxidation (M))|F}{I|L}[WK]GG{I|L} 7.3604;6.5199;5.9692;5.1287;4.897;4.8247;4.5792;4.0051;3.9328;3.7547 +;-;-;-;-;-;-;-;-;- + 625 + 1 1.36 143538.2 0.7599999904632568 12311 5015 17319 HBL1_DMSO_200M_050219_2,17328 HBL1_DMSO_200M_050219_2,17328,YIFSGQIRL True True YIFSGQIRL 91.929712 548.811206042767 1561209.0 17319.0 ENSG00000261609|ENST00000648994|GAN 3.815149386723837 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17329 91.935 266.0 274600.0 25 0 18165.0 + 16359 IYPEVVHMF 9 102 567.7858476241408 1133.5571423150816 2 567.7866088747978 MULTI CID FTMS 0 0 0 17319 149841.828125 1.0 0 0.0 10 Unmodified _IYPEVVHMF_ ENSG00000078304|ENST00000694906|PPP2R5C;ENST00000553730.5_1_14:102276279-102348623:+|nuORF;nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C 32.116972079565 0.1225432171549407 4 [Y{I|L}]PEVVHM{M(Oxidation (M))|F} 9 0 + 52.727 0.0 0.0 4.6515 4.6515 77.873 0.0 0.0 0.0 13.853388611133646 6.352615639163197 6.352615639163197 7.690868407561382 0 0.3054621874040891 2.0 0.0 0.0 + + [Y{I|L}]PEVVHM{M(Oxidation (M))|F};[Y{I|L}]PEVV[DN]SV;[Y{I|L}]PEWWQ{I|L};[Y{I|L}]PEWW[AG]{I|L};[Y{I|L}]PEWWAAV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EVVHM{M(Oxidation (M))|F};[Y{I|L}]P{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[YV]SV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EVV[DN]SV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EWWQ{I|L};[VP]Q[HA]PM{I|L}{[QN]|[E{I|L}]|[KN]} 4.6515;3.973;3.5689;2.3771;2.2039;2.1968;2.1883;1.5183;1.1141;1.1071 +;-;-;-;-;-;-;-;-;- + 332 + 1 1.36 62187.8 1.0 12312 5015 17319 HBL1_DMSO_200M_050219_2,17329 HBL1_DMSO_200M_050219_2,17329,IYPEVVHMF True True IYPEVVHMF 91.934635 567.786608874798 7422811.5 17319.0 ENSG00000078304|ENST00000694906|PPP2R5C;;nc|ENSG00000078304|Q13362|PPP2R5C;;nc|ENSG00000078304|Q13362-3|PPP2R5C;;nc|ENSG00000078304|Q13362-4|PPP2R5C;;nc|ENSG00000078304|Q13362-5|PPP2R5C;;nc|ENSG00000078304|Q13362-2|PPP2R5C;;ENST00000553730.5_1_14:102276279-102348623:+|nuORF 6.713589350382487 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17330 91.948 800.0 277050.0 25 0 37501.0 + 15548 IPWKVPGL 8 151 455.2812183471041 908.5478837610084 2 455.2813903689384 MULTI CID FTMS 0 0 0 17319 135939.53125 0.4811020412135711 -3 0.3256759643554687 11 Unmodified _IPWKVPGL_ ENSG00000174231|ENST00000304992|PRPF8 49.66892048692302 0.1408045912742846 4 {I|L}PWKVPG{I|L} 8 0 + 62.957 0.0 0.0 6.9294 6.9294 84.184 0.0 0.0 0.0 4.827796776480469 10.957290114061353 4.827796776480469 4.827796776480469 0 0.6861818737241735 1.5228787452803376 0.0 0.0 + + {I|L}PWKVPG{I|L};WP{I|L}KVPG{I|L};{I|L}{I|L}[TA]VK[HQ];{I|L}PWKVPAV;[WP]KVP{I|L}G{I|L};WP{I|L}KVPAV;{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}P{I|L}G{I|L};{I|L}{I|L}{[SA]|[TG]}K{I|L}HQ;{I|L}{I|L}{[SA]|[TG]}K[HQ]{I|L};[WK]VPP{I|L}G{I|L} 6.9294;6.398;5.7234;5.2321;4.742;4.7007;4.6851;3.5908;3.4265;3.1408 +;-;-;-;-;-;-;-;-;- + 396 + 1 1.36 169106.6 0.6200000047683716 12313 5015 17319 HBL1_DMSO_200M_050219_2,17330 HBL1_DMSO_200M_050219_2,17330,IPWKVPGL False True IPWKVPGL 91.948452 455.281390368938 7006051.0 17319.0 ENSG00000174231|ENST00000304992|PRPF8 4.1798996925354 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17331 91.956 420.0 120060.0 25 0 8627.4 + 2266 AQFPRFSPVL 10 93 581.3258912515929 1160.6372295699855 2 581.3268310427666 MULTI CID FTMS 0 0 0 17319 126416.0625 0.7274542211458214 1 -0.1324234008789062 12 Unmodified _AQFPRFSPVL_ ENSG00000094914|ENST00000209873|AAAS;nc|ENSG00000094914|Q9NRG9-2|AAAS 33.4449034751529 0.2267874087365337 4 S[VP]{I|L} 4 6 26.555 0.0 0.0 2.2879 0.0 0.0 746.3995838849625 0.0 746.3995838849625 0.0 5.356668758921828 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 + S[VP]{I|L} 2.2879 + + 60 1 1.36 45999.2 1.0 12314 5015 17319 HBL1_DMSO_200M_050219_2,17331 HBL1_DMSO_200M_050219_2,17331,AQFPRFSPVL False True AQFPRFSPVL 91.955954 581.326831042767 1624877.5 17319.0 nc|ENSG00000094914|Q9NRG9-2|AAAS;;ENSG00000094914|ENST00000209873|AAAS 7.605349222819011 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17332 91.971 800.0 126190.0 25 0 9043.2 + 24693 MMPKYLNFV 9 141 571.7911854923865 1141.5678180515729 2 571.7916747927666 MULTI CID FTMS 0 0 0 17319 113647.5546875 1.0 0 0.0 13 Unmodified _MMPKYLNFV_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000415545.2_1_1:92108345-92109332:+|nuORF;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104335448-104335493:+|nuORF 36.04419817259434 0.0971720506436186 4 [KP]Y{I|L}N{M(Oxidation (M))|F}DV{M(Oxidation (M))|F} 9 4 + 35.409 0.0 0.0 3.1018 3.1018 66.526 0.0 0.0 0.0 2.388119913479578 2.484393909943272 2.388119913479578 2.8523572848074963 0 0.4233044188617318 0.0 0.0 0.7742275032520141 [KP]Y{I|L}N{M(Oxidation (M))|F}DV{M(Oxidation (M))|F};{I|L}{I|L}K{M(Oxidation (M))|F}N{M(Oxidation (M))|F}DV{M(Oxidation (M))|F};[KP]Y{I|L}GG{M(Oxidation (M))|F}DV{M(Oxidation (M))|F};[{I|L}P][YK]N{M(Oxidation (M))|F}DV{M(Oxidation (M))|F};[Y{I|L}][KP]N{M(Oxidation (M))|F}DV{M(Oxidation (M))|F};{I|L}{I|L}K{M(Oxidation (M))|F}GG{M(Oxidation (M))|F}DV{M(Oxidation (M))|F};[Y{I|L}]NPK{M(Oxidation (M))|F}DV{M(Oxidation (M))|F};[{I|L}P][YK]GG{M(Oxidation (M))|F}DV{M(Oxidation (M))|F};[Y{I|L}][KP]GG{M(Oxidation (M))|F}DV{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[DP]TKP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.1018;2.8519;2.2951;2.2354;2.1116;2.0453;1.7395;1.4288;1.305;1.2293 -;-;-;-;-;-;-;-;-;- 704 1 1.36 82378.2 0.6800000071525574 12315 5015 17319 HBL1_DMSO_200M_050219_2,17332 HBL1_DMSO_200M_050219_2,17332,MMPKYLNFV True True MMPKYLNFV 91.971258 571.791674792767 774172.5625 17319.0 ENST00000415545.2_1_1:92108345-92109332:+|nuORF;;ENSG00000166598|ENST00000299767|HSP90B1;;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;;ENST00000550479.1_1_12:104335448-104335493:+|nuORF 3.743290821711222 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17333 91.985 800.0 235400.0 25 0 47645.0 -1 0 96 926.5385462011856 1851.062539469171 2 926.5437499880792 MULTI CID FTMS 0 0 0 17319 104809.3046875 1.0 0 0.0 14 4 [QP]DP{I|L}{I|L}YVA{I|L}N 11 -1 62.137 0.0 0.0 3.3568 0.0 0.0 0.0 624.3633360395769 624.3633360395769 54.51243445522814 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 1.7491348669726232 [QP]DP{I|L}{I|L}YVA{I|L}N 3.3568 - 1226 1 1.36 126080.4 0.6899999976158142 12316 5015 17319 HBL1_DMSO_200M_050219_2,17333 HBL1_DMSO_200M_050219_2,17333, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17334 91.999 800.0 108150.0 25 0 14540.0 + 1635 ALMAAPLSL 9 116 451.75274496202985 901.4909369908596 2 451.7530090212822 MULTI CID FTMS 0 0 0 17319 103689.3046875 0.0079838244036172 100 -7.537879943847656 15 Oxidation (M) _ALM(Oxidation (M))AAPLSL_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 40.44857923139169 0.0729940656229577 4 [{I|L}A][WE]S{I|L}A{I|L} 8 5 + 45.239 0.0 0.0 5.0182 5.0182 79.62 0.0 0.0 0.0 7.993201395314045 9.731975075880328 7.993201395314045 7.993201395314045 0 0.6989700043360187 2.0 0.7614393726401688 0.0 [{I|L}A][WE]S{I|L}A{I|L};[{I|L}A]{[RE]|[WV]}[DV]S{I|L};[{I|L}A]{[WT]|[RM]}D{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}W{I|L}A{I|L};[{I|L}A]{[ES]|[DT]|[{I|L}C]}AD{I|L}A{I|L};[{I|L}A]{[RE]|[WV]}[DV]TV;{[HG]|PP}S{M(Oxidation (M))|F}AS{I|L}A{I|L};[PS]P{M(Oxidation (M))|F}AS{I|L}A{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}PS{I|L}A{I|L};{[SA]|[TG]}{M(Oxidation (M))|F}PPS{I|L}A{I|L} 5.0182;4.1316;3.7908;3.7265;3.5076;3.2959;3.0471;3.0471;3.0001;2.2915 -;-;-;-;-;-;-;-;-;- 288 1 1.36 67671.4 0.5699999928474426 12317 5015 17319 HBL1_DMSO_200M_050219_2,17334 HBL1_DMSO_200M_050219_2,17334,ALMAAPLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17335 92.014 800.0 222080.0 25 0 16955.0 + -1 LTPTMGDEDSL 11 157 597.763469127996 1193.512385322792 2 597.7652465701103 MULTI CID FTMS 0 0 0 17319 100601.171875 0.6164753177682406 -1 0.0736770629882812 16 Oxidation (M) _LTPTM(Oxidation (M))GDEDSL_ REV__ENSG00000175311|ENST00000311620|ANKS4B 24.020572477871973 0.5281922720044371 4 {[QN]|[E{I|L}]|[KN]}GGK[EC]{M(Oxidation (M))|F}T{I|L} 10 -1 44.316 0.0 0.0 3.7131 0.0 0.0 0.0 112.9629383809835 112.9629383809835 9.987156982980956 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.079689690656103 0.3054621874040891 {[QN]|[E{I|L}]|[KN]}GGK[EC]{M(Oxidation (M))|F}T{I|L} 3.7131 - 2204 1 1.36 135847.6 0.6800000071525574 12318 5015 17319 HBL1_DMSO_200M_050219_2,17335 HBL1_DMSO_200M_050219_2,17335,LTPTMGDEDSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17337 92.018 4.3 14132000.0 25 0 2369700.0 + 3919 DALGKLISI 9 78 465.2869827307355 928.559412528271 2 465.2871581912041 MULTI CID FTMS 0 0 0 17336 15006366.0 1.0 0 0.0 1 Unmodified _DALGKLISI_ ENSG00000089154|ENST00000300648|GCN1 55.50274090549119 0.0285720310785888 4 {[DA]|[EG]}{I|L}G 4 5 44.253 0.0 0.0 4.7657 0.0 0.0 0.0 569.3693941705686 569.3693941705686 22.56498736291583 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.0 0.0 + {[DA]|[EG]}{I|L}G 4.7657 + + 128 + 1 1.36 48839.5 1.0 12319 5016 17336 HBL1_DMSO_200M_050219_2,17337 HBL1_DMSO_200M_050219_2,17337,DALGKLISI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17338 92.02 21.0 3030900.0 25 0 803060.0 + 20021 LIMQRTLL 8 64 494.3030347113949 986.5915164895898 2 494.3031494021416 MULTI CID FTMS 0 0 0 17336 2233625.0 0.8594317159882388 1 -0.1356201171875 2 Unmodified _LIMQRTLL_ REV__ENST00000380752.9_1_13:30084114-30084255:-|nuORF 24.67388899826682 0.525179942228231 4 {I|L}{I|L}MA[WK]{I|L}{I|L} 8 -1 + 42.612 0.0 0.0 4.3191 4.3191 82.109 0.0 0.0 0.0 7.166987712964499 20.42078796995845 7.166987712964499 17.730012720637376 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {I|L}{I|L}MA[WK]{I|L}{I|L};{I|L}{I|L}M[W{I|L}][KA]{I|L} 4.3191;2.522 -;- 86 1 1.36 52501.3 1.0 12320 5016 17336 HBL1_DMSO_200M_050219_2,17338 HBL1_DMSO_200M_050219_2,17338,LIMQRTLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17339 92.021 9.2 6375400.0 25 0 1251500.0 + 36160 SVVESVFKL 9 68 504.2923761875836 1006.5701994419672 2 504.2926513552666 MULTI CID FTMS 0 0 0 17336 6184911.0 1.0 0 0.0 3 Unmodified _SVVESVFKL_ ENSG00000242372|ENST00000374450|EIF6;nc|ENSG00000242372|P56537-2|EIF6 43.77239144664712 0.0547478964384323 4 [VS]VESV{M(Oxidation (M))|F}K{I|L} 9 0 + 73.599 0.0 0.0 7.3118 7.3118 95.466 0.0 0.0 0.0 40.23387189888816 9.085842975353629 9.085842975353629 51.23757735006379 0 1.1549471895720984 2.0 0.4247425010840047 0.0 + + [VS]VESV{M(Oxidation (M))|F}K{I|L};[R{M(Oxidation (M))|F}]A{[QN]|[E{I|L}]|[KN]}MK{I|L} 7.3118;2.2215 +;- + 236 + 1 1.36 50321.7 1.0 12321 5016 17336 HBL1_DMSO_200M_050219_2,17339 HBL1_DMSO_200M_050219_2,17339,SVVESVFKL True True SVVESVFKL 92.020676 504.292651355267 92847192.0 17336.0 nc|ENSG00000242372|P56537-2|EIF6;;ENSG00000242372|ENST00000374450|EIF6 7.17211373647054 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17340 92.022 26.0 1918000.0 25 0 182710.0 + 16878 KIFEMLEGV 9 92 533.2866340351951 1064.55871513719 2 533.2865478396416 MULTI CID FTMS 0 0 0 17336 2115739.75 0.760701261558549 -1 0.1324234008789062 4 Unmodified _KIFEMLEGV_ chrX:135779641-135781561|13|36.23|0.53|6.09|-|ENST00000617203|CT45A5,CT45A5;chrX:135781735-135785220|13|147.77|0.31|8.87|-|ENST00000487941|CT45A5,CT45A5;chrX:135881315-135882536|15|139.0|1.0|7.12|-|ENST00000617981|CT45A10,CT45A10;chrX:135885350-135888848|10|46.0|0.05|9.87|-|ENST00000611668|CT45A10,CT45A10;ENSG00000228836|ENST00000698999|CT45A5;ENSG00000268940|ENST00000594565|CT45A1;ENSG00000269096|ENST00000598716|CT45A3;ENSG00000269586|ENST00000682849|CT45A10;ENSG00000270946|ENST00000620704|CT45A9;ENSG00000271449|ENST00000612907|CT45A2;ENSG00000273696|ENST00000610598|CT45A7;ENSG00000278085|ENST00000611660|CT45A8;ENSG00000278289|ENST00000620654|CT45A6 32.78568957990786 0.1150597335874693 4 {[QN]|[E{I|L}]|[KN]}M{M(Oxidation (M))|F}K{I|L}ER 8 6 + 66.279 0.0 0.0 6.226 6.226 81.486 0.0 0.0 0.0 15.528419686577806 6.079634678231471 6.079634678231471 4.776296993281406 0 0.8807196863200843 0.8538719643217619 0.3807196863200844 0.0 {[QN]|[E{I|L}]|[KN]}M{M(Oxidation (M))|F}K{I|L}ER;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}KM{I|L}ER;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}MK{I|L}ER;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{M(Oxidation (M))|F}K{I|L}ER;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}K{I|L}ER;[{M(Oxidation (M))|F}E]P{M(Oxidation (M))|F}K{I|L}ER;[{M(Oxidation (M))|F}E]M{I|L}K{I|L}ER;{[QN]|[E{I|L}]|[KN]}M{M(Oxidation (M))|F}K{I|L}T[PS];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{M(Oxidation (M))|F}K{I|L}ER;[{M(Oxidation (M))|F}E]{I|L}KM{I|L}ER 6.226;5.7773;5.4945;4.7673;4.6924;4.63;4.5552;4.438;4.3472;4.1813 -;-;-;-;-;-;-;-;-;- 344 1 1.36 44725.6 1.0 12322 5016 17336 HBL1_DMSO_200M_050219_2,17340 HBL1_DMSO_200M_050219_2,17340,KIFEMLEGV True True KIFEMLEGV 92.021855 533.286547839642 22447578.0 17336.0 ENSG00000269096|ENST00000598716|CT45A3;;ENSG00000271449|ENST00000612907|CT45A2;;ENSG00000268940|ENST00000594565|CT45A1;;chrX:135885350-135888848|10|46.0|0.05|9.87|-|ENST00000611668|CT45A10,CT45A10;;ENSG00000228836|ENST00000698999|CT45A5;;chrX:135881315-135882536|15|139.0|1.0|7.12|-|ENST00000617981|CT45A10,CT45A10;;ENSG00000270946|ENST00000620704|CT45A9;;ENSG00000278289|ENST00000620654|CT45A6;;ENSG00000278085|ENST00000611660|CT45A8;;ENSG00000273696|ENST00000610598|CT45A7;;ENSG00000269586|ENST00000682849|CT45A10;;chrX:135779641-135781561|13|36.23|0.53|6.09|-|ENST00000617203|CT45A5,CT45A5;;chrX:135781735-135785220|13|147.77|0.31|8.87|-|ENST00000487941|CT45A5,CT45A5 5.885635058085124 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17341 92.023 42.0 1385100.0 25 0 213630.0 + 24790 MPIKINLI 8 82 471.2962935842053 940.5780342352108 2 471.2961608767509 MULTI CID FTMS 0 0 0 17336 1402605.0 0.0550733242981886 -3 0.36480712890625 5 Unmodified _MPIKINLI_ ENSG00000134001|ENST00000256383|EIF2S1 40.44857923139169 0.2267865117615937 4 [{I|L}P]K{I|L}NM{I|L}{I|L} 8 2 + 47.172 0.0 0.0 5.0152 5.0152 78.88 0.0 0.0 0.0 7.1457092972810585 6.211375162600703 6.211375162600703 7.1457092972810585 0 0.6989700043360187 1.6989700043360187 0.0 0.3807196863200844 [{I|L}P]K{I|L}NM{I|L}{I|L};MP{I|L}[R{I|L}]RR;[{I|L}P]K{I|L}GGM{I|L}{I|L};[K{I|L}]P{I|L}NM{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KPM{I|L}{I|L};[K{I|L}]P{I|L}GGM{I|L}{I|L};MRR[RP]{I|L}{I|L};[K{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}PM{I|L}{I|L} 5.0152;4.2555;4.0305;2.9919;2.5978;2.0072;1.8839;1.69 -;-;-;-;-;-;-;- 169 1 1.36 54326.5 1.0 12323 5016 17336 HBL1_DMSO_200M_050219_2,17341 HBL1_DMSO_200M_050219_2,17341,MPIKINLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17342 92.024 51.0 1202200.0 25 0 179790.0 + 41574 VPPENIIYI 9 69 529.3001695460804 1056.585786158961 2 529.3009521365166 MULTI CID FTMS 0 0 0 17336 1089444.875 1.0 0 0.0 6 Unmodified _VPPENIIYI_ ENSG00000155096|ENST00000337198|AZIN1;ENST00000522311.1_1_8:103848756-103855898:-|nuORF 32.30548876998284 0.1201446275138228 4 N{I|L}V{I|L}Y{I|L} 6 5 45.208 0.0 0.0 4.2787 0.0 0.0 323.1488514630875 0.0 323.1488514630875 0.0 22.53205960551832 0.0 0.0 0 0.7742275032520141 0.0 0.0 1.055462187404089 N{I|L}V{I|L}Y{I|L} 4.2787 - 156 1 1.36 53331.8 1.0 12324 5016 17336 HBL1_DMSO_200M_050219_2,17342 HBL1_DMSO_200M_050219_2,17342,VPPENIIYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17343 92.026 69.0 618150.0 25 0 60777.0 + 34083 SLLGDDALVQV 11 67 565.3080515033486 1128.601550073497 2 565.3085815310478 MULTI CID FTMS 0 0 0 17336 850877.75 0.3891181491961166 -1 0.1324234008789062 7 Unmodified _SLLGDDALVQV_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 47.74868867922204 0.1300977870992118 4 {NN|[MP]|[D{I|L}]|[EV]}AV{[DA]|[EG]}S{I|L} 8 8 37.53 0.0 0.0 3.3254 0.0 0.0 0.0 341.1809317475783 341.1809317475783 11.359567063674833 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 1.2215141619232908 0.0 {NN|[MP]|[D{I|L}]|[EV]}AV{[DA]|[EG]}S{I|L} 3.3254 - 273 1 1.36 41409.2 1.0 12325 5016 17336 HBL1_DMSO_200M_050219_2,17343 HBL1_DMSO_200M_050219_2,17343,SLLGDDALVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17344 92.027 51.0 841580.0 25 0 126750.0 + 16979 KIVIDFDSI 9 81 525.297477774159 1048.580402615118 2 525.2986938357353 MULTI CID FTMS 0 0 0 17336 540748.1875 0.1190156863530533 8 -0.8704757690429688 8 Unmodified _KIVIDFDSI_ ENSG00000129187|ENST00000438320|DCTD;nc|ENSG00000129187|P32321-2|DCTD 22.736283301280096 0.2418982879461534 4 S{I|L} 2 7 26.013 0.0 0.0 2.4808 0.0 0.0 830.4531270797648 0.0 830.4531270797648 0.0 11.642659685904343 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 + S{I|L} 2.4808 + + 159 + 1 1.36 38300.6 1.0 12326 5016 17336 HBL1_DMSO_200M_050219_2,17344 HBL1_DMSO_200M_050219_2,17344,KIVIDFDSI False True KIVIDFDSI 92.027372 525.298693835735 3875026.0 17336.0 nc|ENSG00000129187|P32321-2|DCTD;;ENSG00000129187|ENST00000438320|DCTD 2.592072685559591 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17345 92.029 72.0 718130.0 25 0 112940.0 + 38288 TQDTNTFFL 9 84 543.7578654840144 1085.5011780348286 2 543.7590209841728 MULTI CID FTMS 0 0 0 17336 389145.125 0.9313621169576848 -1 0.1324234008789062 9 Unmodified _TQDTNTFFL_ ENSG00000160688|ENST00000292180|FLAD1;nc|ENSG00000160688|Q8NFF5-2|FLAD1;nc|ENSG00000160688|Q8NFF5-3|FLAD1;nc|ENSG00000160688|Q8NFF5-4|FLAD1;nc|ENSG00000160688|Q8NFF5-5|FLAD1 13.90604991867851 0.4602628045680013 4 {[TV]|[{I|L}S]}GY{I|L}{M(Oxidation (M))|F} 6 7 32.0 0.0 0.0 2.9479 0.0 0.0 0.0 402.125409545143 402.125409545143 18.02046884880937 0.0 0.0 0.0 0 0.0 2.0 0.2614393726401688 0.0 {[TV]|[{I|L}S]}GY{I|L}{M(Oxidation (M))|F} 2.9479 - 101 1 1.36 45533.3 1.0 12327 5016 17336 HBL1_DMSO_200M_050219_2,17345 HBL1_DMSO_200M_050219_2,17345,TQDTNTFFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17346 92.032 153.0 1473300.0 25 0 180910.0 + 39591 VDALELGPPVV 11 154 554.8167007101645 1107.6188484871288 2 554.8171874880791 MULTI CID FTMS 0 0 0 17336 375414.34375 0.3542396258357168 -1 0.1324234008789062 10 Unmodified _VDALELGPPVV_ ENSG00000114779|ENST00000361143|ABHD14B;ENST00000487005.1_1_3:52003444-52008077:-|nuORF;nc|ENSG00000114779|Q96IU4-2|ABHD14B 23.78978130925829 0.5336113198261219 4 {I|L}{I|L}DGDA{I|L}KNG 10 10 55.505 0.0 0.0 5.0112 0.0 0.0 0.0 108.06914080574134 108.06914080574134 4.503639918940507 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.0044321917401078 0.3054621874040891 {I|L}{I|L}DGDA{I|L}KNG 5.0112 - 49094 1 1.36 174966.5 1.0 12328 5016 17336 HBL1_DMSO_200M_050219_2,17346 HBL1_DMSO_200M_050219_2,17346,VDALELGPPVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17347 92.034 100.0 657080.0 25 0 124430.0 + 9085 FFFTARTSF 9 79 562.283067094463 1122.551581255726 2 562.2831298708916 MULTI CID FTMS 0 0 0 17336 352806.15625 0.4682195162048338 1 -0.1356201171875 11 Unmodified _FFFTARTSF_ ENSG00000153179|ENST00000542104|RASSF3;ENST00000540088.1_1_12:65004304-65005331:+|nuORF;nc|ENSG00000153179|Q86WH2-2|RASSF3 35.61225514009592 0.0995432151795903 4 {M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}T[QP]HTV 9 5 + 55.666 0.0 0.0 4.9589 4.9589 70.664 0.0 0.0 0.0 7.350779384990211 3.0102999566398125 3.0102999566398125 1.7339374311232802 0 0.4247425010840047 0.0 0.8494850021680094 0.3494850021680094 {M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}T[QP]HTV;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}TA[PG]HTV;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}T[QP]HS{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}TA[PG]HS{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KS]AT{M(Oxidation (M))|F}{M(Oxidation (M))|F}E;{M(Oxidation (M))|F}{M(Oxidation (M))|F}[YR][PG]HTV;{M(Oxidation (M))|F}{M(Oxidation (M))|F}[YR][PG]HS{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KS][YR]{M(Oxidation (M))|F}E;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KS]A[KC][RH] 4.9589;4.8044;4.6907;4.5363;4.106;2.7533;2.4851;1.7484;0.14267 -;-;-;-;-;-;-;-;- 164 + 1 1.36 56547.4 1.0 12329 5016 17336 HBL1_DMSO_200M_050219_2,17347 HBL1_DMSO_200M_050219_2,17347,FFFTARTSF True True FFFTARTSF 92.03428 562.283129870892 11064184.0 17336.0 ENSG00000153179|ENST00000542104|RASSF3;;ENST00000540088.1_1_12:65004304-65005331:+|nuORF;;nc|ENSG00000153179|Q86WH2-2|RASSF3 3.1198778251806893 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17348 92.047 743.0 407100.0 25 0 31702.0 + 29289 QIFNGTFVKL 10 221 583.8321631749548 1165.6497734167094 2 584.3340942263603 MULTI CID FTMS 0 0 0 17336 272869.75 0.0271473723524149 -3 0.36480712890625 12 Unmodified _QIFNGTFVKL_ ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF 74.19965305603844 0.0188013450058842 4 {I|L}Q{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}VK{I|L} 10 2 + 90.032 0.0 0.0 7.7237 7.7237 88.226 0.0 0.0 0.0 30.51152522447382 6.588709367037282 6.588709367037282 6.588709367037282 0 1.0 1.6989700043360187 0.6643943297944485 0.8754223615525999 {I|L}Q{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}VK{I|L};{I|L}Q{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}V{I|L}K;{I|L}Q{M(Oxidation (M))|F}GGGT{M(Oxidation (M))|F}VK{I|L};{I|L}Q{M(Oxidation (M))|F}GGGT{M(Oxidation (M))|F}V{I|L}K;{I|L}Q{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}K{I|L}V;{I|L}[AG]{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}VK{I|L};{I|L}[AG]{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}V{I|L}K;{I|L}Q{M(Oxidation (M))|F}GGGT{M(Oxidation (M))|F}K{I|L}V;{I|L}[AG]{M(Oxidation (M))|F}GGGT{M(Oxidation (M))|F}VK{I|L};{I|L}[AG]{M(Oxidation (M))|F}GGGT{M(Oxidation (M))|F}V{I|L}K 7.7237;7.1585;6.9375;6.3723;5.6248;5.48;4.9148;4.8386;4.6969;4.1316 -;-;-;-;-;-;-;-;-;- 5940 + 1 1.36 223359.9 1.0 12330 5016 17336 HBL1_DMSO_200M_050219_2,17348 HBL1_DMSO_200M_050219_2,17348,QIFNGTFVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17349 92.055 464.0 323450.0 25 0 86285.0 + 25674 NGIKVLLI 8 112 435.2945606477974 868.5745683623949 2 435.2950622439384 MULTI CID FTMS 0 0 0 17336 199420.53125 0.0955219676409538 -3 0.36480712890625 13 Unmodified _NGIKVLLI_ ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 93.88341677533236 0.0679596620250313 4 [NG]{I|L}KV{I|L}{I|L}{I|L} 8 0 + 74.308 0.0 0.0 8.5551 8.5551 90.791 0.0 0.0 0.0 20.52841968657781 55.91837331885195 20.52841968657781 7.90964200659667 0 0.805462187404089 1.154901959985743 0.0 1.860924374808178 + + [NG]{I|L}KV{I|L}{I|L}{I|L};[NG]{I|L}K{I|L}V{I|L}{I|L};{I|L}{I|L}VKGN{I|L}{I|L};[{I|L}V]K{I|L}GN{I|L}{I|L};{I|L}{I|L}VW{I|L}{I|L}{I|L};{I|L}{I|L}VKGGG{I|L}{I|L};[{I|L}V]K[NG]{I|L}{I|L}{I|L};{I|L}{I|L}WV{I|L}{I|L}{I|L};[{I|L}V]{I|L}KGN{I|L}{I|L};[KQ][VG]V{I|L}{I|L}{I|L} 8.5551;7.6445;5.6247;5.0227;4.8553;4.5583;4.5447;4.5087;4.3295;4.0663 +;-;-;-;-;-;-;-;-;- + 326 1 1.36 120472.7 1.0 12331 5016 17336 HBL1_DMSO_200M_050219_2,17349 HBL1_DMSO_200M_050219_2,17349,NGIKVLLI True True NGIKVLLI 92.055393 435.295062243938 49037028.0 17336.0 ENSG00000119912|ENST00000265986|IDE;;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 4.2207686106363935 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17350 92.069 800.0 123160.0 25 0 12038.0 -1 MDLIRGVLLRL 11 122 670.9099814357676 1339.805409938335 2 670.9106323122978 MULTI CID FTMS 0 0 0 17336 182642.65625 0.3174897678659275 2 -0.2306365966796875 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MDLIRGVLLRL_ ENSG00000164318|ENST00000322350|EGFLAM;nc|ENSG00000164318|Q63HQ2|EGFLAM 12.240655878213236 0.7805268987462184 4 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L} 11 -1 63.709 0.0 0.0 4.7551 0.0 0.0 0.0 227.1748059774088 227.1748059774088 42.81798269206295 0.0 0.0 0.0 0 0.0 1.0 0.3807196863200844 1.4731975075880328 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L} 4.7551 - 9216 1 1.36 79999.3 0.8899999856948853 12332 5016 17336 HBL1_DMSO_200M_050219_2,17350 HBL1_DMSO_200M_050219_2,17350,MDLIRGVLLRL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17351 92.083 800.0 284650.0 25 0 21363.0 -1 0 120 835.4004221107537 2503.1794369324607 3 835.7353393435478 MULTI CID FTMS 0 0 0 17336 173544.453125 0.4950702669048552 -1 0.1324234008789062 15 4 {[TV]|[{I|L}S]}AAESA[QP]{I|L}{I|L}N 12 -1 54.369 0.0 0.0 2.172 0.0 0.0 0.0 1305.5137212095929 1305.5137212095929 14.137619337239578 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 1.7302046884880935 0.25 {[TV]|[{I|L}S]}AAESA[QP]{I|L}{I|L}N 2.172 - 23562 1 1.36 158504.1 0.8700000047683716 12333 5016 17336 HBL1_DMSO_200M_050219_2,17351 HBL1_DMSO_200M_050219_2,17351, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17352 92.097 800.0 222880.0 25 0 23037.0 + 2469 AQYDNLWRL 9 171 589.8014528910385 1177.5883528488769 2 589.8008911013603 MULTI CID FTMS 0 0 0 17336 154072.96875 1.0 0 0.0 16 Unmodified _AQYDNLWRL_ ENSG00000100335|ENST00000325301|MIEF1 74.92900055777586 0.0191935851694334 4 [QA]YDN{I|L}WR{I|L} 9 0 [QA] + + 67.6 21.025 10.56 5.7405 5.7405 55.647 0.0 0.0 0.0 0.0 39.64078552550141 0.0 0.0 0 0.9247425010840048 0.0 0.0 1.6906140654642814 + + [QA]YDN{I|L}WR{I|L} 5.7405 + + 4964 + 1 1.36 131755.4 0.8199999928474426 12334 5016 17336 HBL1_DMSO_200M_050219_2,17352 HBL1_DMSO_200M_050219_2,17352,AQYDNLWRL True True AQYDNLWRL 92.096909 589.80089110136 1718566.75 17336.0 ENSG00000100335|ENST00000325301|MIEF1 6.752122243245442 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17353 92.112 800.0 76832.0 25 0 5203.4 -1 0 88 753.875401963772 3011.472501988688 4 754.1291992068291 MULTI CID FTMS 0 0 0 17336 112612.515625 1.0 0 0.0 17 4 A{I|L}SA{I|L}SD{I|L}HA[HK] 12 -1 51.329 0.0 0.0 1.7044 0.0 0.0 1749.7909356818502 0.0 1749.7909356818502 0.0 36.40723485800656 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 A{I|L}SA{I|L}SD{I|L}HA[HK] 1.7044 - 365 + 1 1.36 52845.2 0.7099999785423279 12335 5016 17336 HBL1_DMSO_200M_050219_2,17353 HBL1_DMSO_200M_050219_2,17353, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17354 92.121 476.0 207710.0 25 0 29765.0 + 37332 TIYERFVLV 9 116 570.3270034866434 1138.6394540400868 2 570.3277465701103 MULTI CID FTMS 0 0 0 17336 113389.5390625 0.8770795714101228 -1 0.1324234008789062 18 Unmodified _TIYERFVLV_ ENSG00000101343|ENST00000536226|CRNKL1;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;nc|ENSG00000101343|Q9BZJ0|CRNKL1 40.23920728925047 0.0741434193262949 4 [{I|L}T]QS[HQ]{I|L}T{I|L}V 10 6 + 57.668 0.0 0.0 5.0647 5.0647 79.347 0.0 0.0 0.0 16.20876682425562 33.34916966173054 16.20876682425562 7.412129137168286 0 1.1989700043360187 2.0 0.3494850021680094 0.0 [{I|L}T]QS[HQ]{I|L}T{I|L}V;[{I|L}T]YA[{M(Oxidation (M))|F}V]{I|L}T{I|L}V;[{I|L}T]YA[{I|L}T]{M(Oxidation (M))|F}V{I|L}V;[{I|L}T][AG]S[HQ]{I|L}T{I|L}V;[{I|L}T]Q{[QV]|[N{I|L}]|[RA]|[KV]}[HT]T{I|L}V;[{I|L}T]Q{[QV]|[N{I|L}]|[RA]|[KV]}QQVPV;{[QN]|[E{I|L}]|[KN]}D[{I|L}V]QQVPV;{[QN]|[E{I|L}]|[KN]}D[{I|L}V][HT]T{I|L}V;{[VA]|[{I|L}G]}ATS[HQ]{I|L}T{I|L}V;[{I|L}T]VQQ{[QV]|[N{I|L}]|[RA]|[KV]}QPV 5.0647;4.4137;4.4137;4.2598;4.1601;3.5899;3.281;3.0778;2.9334;2.8203 -;-;-;-;-;-;-;-;-;- 636 1 1.36 80223.5 1.0 12336 5016 17336 HBL1_DMSO_200M_050219_2,17354 HBL1_DMSO_200M_050219_2,17354,TIYERFVLV True True TIYERFVLV 92.120659 570.32774657011 1504204.375 17336.0 nc|ENSG00000101343|Q9BZJ0|CRNKL1;;nc|ENSG00000101343|Q9BZJ0-3|CRNKL1;;ENSG00000101343|ENST00000536226|CRNKL1 7.179486910502116 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17355 92.134 800.0 242640.0 25 0 25322.0 + + 22828 VYLVIRAL 8 148 473.789514499717 945.564476066234 2 473.7898742556572 MULTI CID FTMS 0 0 0 17336 95679.9609375 0.4434222103818938 -7 0.8110885620117188 19 Unmodified _LRPFTLSL_ ENST00000546398.5_1_12:95611596-95687545:+|nuORF;ENST00000552660.5_1_12:95650374-95694446:+|nuORF;ENST00000547997.5_1_12:95650374-95694446:+|nuORF;ENST00000550106.5_1_12:95650374-95668525:+|nuORF;ENST00000549192.5_1_12:95650374-95690042:+|nuORF;ENSG00000028203|ENST00000436874|VEZT;nc|ENSG00000028203|Q9HBM0-2|VEZT;ENST00000547611.5_1_12:95611639-95668525:+|nuORF 56.17704186161178 0.1143274477948619 4 {I|L}D{M(Oxidation (M))|F}V{I|L}RA{I|L} 8 -1 + 49.909 0.0 0.0 5.2782 5.2782 80.21 0.0 0.0 0.0 8.26077129991269 10.140158362635 8.26077129991269 7.312454110865758 0 0.5530758579275314 1.3979400086720375 0.5 0.3494850021680094 {I|L}D{M(Oxidation (M))|F}V{I|L}RA{I|L};[{I|L}P]R{I|L}{M(Oxidation (M))|F}TS{I|L};[{M(Oxidation (M))|F}V]EV{I|L}RA{I|L};[{I|L}P]R{M(Oxidation (M))|F}{I|L}TS{I|L};[YV][RV]P{I|L}S{I|L};[{I|L}P]R{M(Oxidation (M))|F}T{I|L}S{I|L};{I|L}D{M(Oxidation (M))|F}V{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L};[R{I|L}]P{I|L}{M(Oxidation (M))|F}TS{I|L};[R{I|L}]P{M(Oxidation (M))|F}{I|L}TS{I|L};[R{I|L}]P{M(Oxidation (M))|F}T{I|L}S{I|L} 5.2782;4.5048;4.4045;4.2478;4.2058;4.1966;3.9031;3.888;3.631;3.5798 -;-;-;-;-;-;-;-;-;+ + 936 + 1 1.36 151124.1 0.5699999928474426 12337 5016 17336 HBL1_DMSO_200M_050219_2,17355 HBL1_DMSO_200M_050219_2,17355,LRPFTLSL False False VYLVIRAL 92.134473 473.789874255657 2504817.5 17336.0 ENST00000546398.5_1_12:95611596-95687545:+|nuORF;;ENST00000552660.5_1_12:95650374-95694446:+|nuORF;;ENST00000547997.5_1_12:95650374-95694446:+|nuORF;;ENST00000550106.5_1_12:95650374-95668525:+|nuORF;;ENST00000549192.5_1_12:95650374-95690042:+|nuORF;;ENSG00000028203|ENST00000436874|VEZT;;nc|ENSG00000028203|Q9HBM0-2|VEZT;;ENST00000547611.5_1_12:95611639-95668525:+|nuORF 4.273460070292155 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17356 92.149 800.0 221200.0 25 0 51202.0 + 27646 PLGSPLLL 8 143 405.2602548229989 808.5059567127978 2 405.2598449587822 MULTI CID FTMS 0 0 0 17336 88380.3046875 0.4449247523701086 -2 0.2061004638671875 20 Unmodified _PLGSPLLL_ ENST00000537708.1_1_12:6669555-6669804:-|nuORF 59.79521254764295 0.1151759508933577 4 [{I|L}P][SG]P{I|L}{I|L}{I|L} 8 0 + 49.777 0.0 0.0 6.1566 6.1566 82.572 0.0 0.0 0.0 11.686048629533218 25.831794521717896 11.686048629533218 6.082472687870023 0 0.8494850021680094 1.6989700043360187 1.0189301784845295 0.0 + + [{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P]KEP{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L};[K{I|L}]PEP{I|L}{I|L} 6.1566;5.4043;5.352;2.3405 +;-;-;- + 247 1 1.36 140401.0 0.4900000095367431 12338 5016 17336 HBL1_DMSO_200M_050219_2,17356 HBL1_DMSO_200M_050219_2,17356,PLGSPLLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17358 92.154 7.4 5163500.0 25 0 754180.0 + + 869 DALDVANKIGII 12 73 621.3575757175456 1240.7005985018911 2 621.3594848513603 MULTI CID FTMS 0 0 0 17357 5250254.0 0.0878221025059502 3 -0.297760009765625 1 Unmodified _AEVDVNQKLLL_ ENST00000471152.1_2_3:161146917-161147007:-|nuORF;ENSG00000198242|ENST00000422514|RPL23A;ENST00000467573.1_1_21:40499576-40499963:+|nuORF 26.020703789607367 0.4812285719068541 4 {[DA]|[EG]}{I|L}{I|L}{I|L}AVDEG{I|L}{I|L} 12 -1 + 61.295 0.0 0.0 4.9404 4.9404 71.955 0.0 0.0 0.0 9.71217778224478 7.29872819733373 7.29872819733373 2.429928190999391 0 0.718765315847925 1.5228787452803376 0.3807196863200844 0.0 {[DA]|[EG]}{I|L}{I|L}{I|L}AVDEG{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}{[VA]|[{I|L}G]}EG{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}[W{I|L}]G{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}AVDW{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}A{I|L}VAVDEG{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}{[VA]|[{I|L}G]}W{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}D{[VA]|[{I|L}G]}EG{I|L}{I|L};{[VA]|[{I|L}G]}E{I|L}{I|L}AVDEG{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}AV{I|L}AVDEG{I|L}{I|L} 4.9404;4.7445;4.4543;4.3433;4.1576;4.1474;4.1474;4.0953;3.9159;3.8369 -;-;-;-;-;-;-;-;-;- 1411 1 1.358 37003.2 1.0 12339 5017 17357 HBL1_DMSO_200M_050219_2,17358 HBL1_DMSO_200M_050219_2,17358,AEVDVNQKLLL False False DALDVANKIGII 92.153938 621.35948485136 2609422400.0 17357.0 ENST00000471152.1_2_3:161146917-161147007:-|nuORF;;ENSG00000198242|ENST00000422514|RPL23A;;ENST00000467573.1_1_21:40499576-40499963:+|nuORF 5.3619106610616045 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17359 92.155 2.6 26743000.0 25 0 4946100.0 + 7496 EGYLIPIR 8 60 480.77953309405433 959.5445132549088 2 480.7796813845634 MULTI CID FTMS 0 0 0 17357 21092300.0 0.9313524580210728 -1 0.1356201171875 2 Unmodified _EGYLIPIR_ REV__ENSG00000038274|ENST00000321757|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-2|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-3|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-4|MAT2B 34.10243960390752 0.3329570729325616 4 {[DA]|[EG]}Y{I|L}{I|L}P[R{I|L}] 8 -1 + 54.659 0.0 0.0 5.6963 5.6963 89.728 0.0 0.0 0.0 46.07509072285026 7.346368802282015 7.346368802282015 54.65858457933251 0 0.8807196863200843 1.6989700043360187 0.0 0.4247425010840047 {[DA]|[EG]}Y{I|L}{I|L}P[R{I|L}] 5.6963 + + 51 + 1 1.358 60449.3 1.0 12340 5017 17357 HBL1_DMSO_200M_050219_2,17359 HBL1_DMSO_200M_050219_2,17359,EGYLIPIR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17360 92.156 9.1 5685100.0 25 0 989550.0 + 35833 SVLDDNKLLTL 11 64 615.8508973479269 1229.6872417626537 2 615.8511840701103 MULTI CID FTMS 0 0 0 17357 6115932.0 1.0 0 0.0 3 Unmodified _SVLDDNKLLTL_ ENSG00000197102|ENST00000360184|DYNC1H1 57.10758569107544 0.0808838796364293 4 [VS]{I|L}[NG]D{I|L}W{I|L} 9 5 79.944 0.0 0.0 6.5012 0.0 0.0 0.0 229.11983388595368 229.11983388595368 56.01142380767719 0.0 0.0 0.0 0 1.3494850021680094 2.0 1.610924374808178 0.7742275032520141 [VS]{I|L}[NG]D{I|L}W{I|L} 6.5012 - 761 1 1.358 47611.4 1.0 12341 5017 17357 HBL1_DMSO_200M_050219_2,17360 HBL1_DMSO_200M_050219_2,17360,SVLDDNKLLTL True True SVLDDNKLLTL 92.156294 615.85118407011 157855644.0 17357.0 ENSG00000197102|ENST00000360184|DYNC1H1 6.482113043467204 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17361 92.157 32.0 1928600.0 25 0 346800.0 + 14878 ILLAEVPTM 9 78 493.7834597686514 985.5523666041028 2 493.7834045290947 MULTI CID FTMS 0 0 0 17357 1228528.875 0.9977362639370674 1 -0.0950164794921875 4 Unmodified _ILLAEVPTM_ ENSG00000171453|ENST00000642195|POLR1C;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C 44.40701690623563 0.0526327925666318 4 {I|L}{I|L}AE{I|L}VPTM 9 2 {I|L}{I|L}AE{I|L} + + 31.587 28.372 5.2605 3.205 3.205 46.389 0.0 0.0 0.0 0.0 0.8294088079428974 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 {I|L}{I|L}AE{I|L}VPTM 3.205 - 205 + 1 1.358 52120.6 1.0 12342 5017 17357 HBL1_DMSO_200M_050219_2,17361 HBL1_DMSO_200M_050219_2,17361,ILLAEVPTM True True ILLAEVPTM 92.157473 493.783404529095 10868313.0 17357.0 nc|ENSG00000171453|O15160-2|POLR1C;;ENST00000481352.6_1_6:43484832-43487644:+|nuORF;;ENSG00000171453|ENST00000642195|POLR1C 5.115176518758138 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17362 92.159 51.0 1479200.0 25 0 155090.0 + 32104 RVLQNLLTI 9 92 535.3399020782176 1068.6652512232351 2 535.3401977419853 MULTI CID FTMS 0 0 0 17357 802644.8125 0.1303808647605526 -2 0.2680435180664062 5 Unmodified _RVLQNLLTI_ ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2 36.12702656103203 0.0967173616627612 4 [{I|L}T]{I|L}[WP]{I|L}{I|L}T{I|L} 9 4 + 54.319 0.0 0.0 5.0829 5.0829 84.572 0.0 0.0 0.0 4.40999983289359 31.92348741261036 4.40999983289359 14.490925311194182 0 0.5 1.3979400086720375 0.4247425010840047 0.0 [{I|L}T]{I|L}[WP]{I|L}{I|L}T{I|L};[W{I|L}]{I|L}{I|L}[TP]{I|L}T{I|L};[W{I|L}]{I|L}{I|L}{[VA]|[{I|L}G]}{I|L}E{I|L} 5.0829;3.7269;2.6957 -;-;- 293 1 1.358 63250.8 1.0 12343 5017 17357 HBL1_DMSO_200M_050219_2,17362 HBL1_DMSO_200M_050219_2,17362,RVLQNLLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17363 92.16 59.0 960540.0 25 0 139700.0 + 33965 SLIEKYFSV 9 75 543.2974160433856 1084.5802791535712 2 543.2977172732353 MULTI CID FTMS 0 0 0 17357 680300.875 1.0 0 0.0 6 Unmodified _SLIEKYFSV_ ENSG00000182481|ENST00000330459|KPNA2 38.17557092003332 0.0854718145212029 4 {[TV]|[{I|L}S]}{I|L}[HT]{I|L}{[ES]|[DT]|[{I|L}C]}SV 10 5 + 57.98 0.0 0.0 5.3458 5.3458 87.011 0.0 0.0 0.0 41.32454362116839 2.635307368558216 2.635307368558216 23.916506143517744 0 0.805462187404089 2.0 0.9802046884880936 0.0 {[TV]|[{I|L}S]}{I|L}[HT]{I|L}{[ES]|[DT]|[{I|L}C]}SV;{[TV]|[{I|L}S]}{I|L}QQ{[DS]|[MA]|[CV]|TT}VPV 5.3458;3.1407 -;- 563 + 1 1.358 51209.7 1.0 12344 5017 17357 HBL1_DMSO_200M_050219_2,17363 HBL1_DMSO_200M_050219_2,17363,SLIEKYFSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17364 92.162 91.0 745670.0 25 0 83514.0 + 34810 SQFEPLDMKL 10 89 604.3053069210018 1206.5960609088036 2 604.3054687380791 MULTI CID FTMS 0 0 0 17357 637099.1875 1.0 0 0.0 7 Unmodified _SQFEPLDMKL_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7 55.46699784157472 0.0484770532980821 4 {[QS]|[NT]}{M(Oxidation (M))|F}E{I|L}PDMK{I|L} 10 2 + 86.452 0.0 0.0 7.1649 7.1649 93.855 0.0 0.0 0.0 47.40031912114908 11.505149978319906 11.505149978319906 23.14393957221963 0 1.2302046884880935 1.3979400086720375 1.805462187404089 0.0 {[QS]|[NT]}{M(Oxidation (M))|F}E{I|L}PDMK{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}E{I|L}P{[WS]|[C(Carbamidomethyl (C)){I|L}]}T{I|L};{[QS]|[NT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}K[HA]{[ET]|[MV]};{[QS]|[NT]}{[NV]|[RG]}R{I|L}{M(Oxidation (M))|F}E{[QS]|[NT]};[{I|L}P]DMK{I|L}{M(Oxidation (M))|F}E{[QS]|[NT]};{[QS]|[NT]}{[NV]|[RG]}R{I|L}E{M(Oxidation (M))|F}{[QS]|[NT]};[{I|L}P]DMK{I|L}E{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[NV]|[RG]}[VG]{I|L}{M(Oxidation (M))|F}E{[QS]|[NT]};[EP]VMK{I|L}{M(Oxidation (M))|F}E{[QS]|[NT]};{[QS]|[NT]}{[NV]|[RG]}[VG]{I|L}E{M(Oxidation (M))|F}{[QS]|[NT]} 7.1649;5.2468;4.2568;3.9332;3.8139;3.4527;3.3334;3.1736;2.8734;2.6932 -;-;-;-;-;-;-;-;-;- 328 + 1 1.358 55080.6 1.0 12345 5017 17357 HBL1_DMSO_200M_050219_2,17364 HBL1_DMSO_200M_050219_2,17364,SQFEPLDMKL True True SQFEPLDMKL 92.162333 604.305468738079 5600592.5 17357.0 nc|ENSG00000166508|P33993-3|MCM7;;ENSG00000166508|ENST00000303887|MCM7 7.797386487325032 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17365 92.165 117.0 826970.0 25 0 109970.0 + 1570 ALLDVFREA 9 94 517.2867500848474 1032.5589472364948 2 517.2848388552666 MULTI CID FTMS 0 0 0 17357 450908.34375 0.1635215944057719 -2 0.2680435180664062 8 Unmodified _ALLDVFREA_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 38.17557092003332 0.0854718145212029 4 [{I|L}A]{I|L}DV{M(Oxidation (M))|F}WAV 9 3 + 71.806 0.0 0.0 6.9542 6.9542 83.797 0.0 0.0 0.0 22.24301211992909 4.607308385314923 4.607308385314923 4.607308385314923 0 1.1989700043360187 2.0 0.3494850021680094 0.0 [{I|L}A]{I|L}DV{M(Oxidation (M))|F}WAV;[{I|L}A]{I|L}DV{M(Oxidation (M))|F}WG{I|L};[{I|L}A]{I|L}D{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}AA{I|L};[{I|L}A]{I|L}D[HA][TP]PV;{I|L}{I|L}AD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}AA{I|L};[{I|L}A]{I|L}QQ[YQ]AV;[{I|L}A]{I|L}QQ[YQ]G{I|L};{I|L}{I|L}DA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}AA{I|L};[{I|L}A]{[QC]|[C(Carbamidomethyl (C))A]}[KC]{I|L}[RV];{NN|[MP]|[D{I|L}]|[EV]}{I|L}A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}AA{I|L} 6.9542;6.508;3.6278;3.5893;2.511;2.41;1.9638;1.6413;1.2446;1.2288 -;-;-;-;-;-;-;-;-;- 584 + 1 1.358 79036.8 1.0 12346 5017 17357 HBL1_DMSO_200M_050219_2,17365 HBL1_DMSO_200M_050219_2,17365,ALLDVFREA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17366 92.167 124.0 819810.0 25 0 251740.0 + 4380 DAVKFFVAV 9 90 498.2819095594391 994.5492661856782 2 498.2814208865166 MULTI CID FTMS 0 0 0 17357 368232.34375 0.4358001951135224 1 -0.0950164794921875 9 Unmodified _DAVKFFVAV_ ENSG00000008294|ENST00000262013|SPAG9;nc|ENSG00000008294|O60271-2|SPAG9;nc|ENSG00000008294|O60271-4|SPAG9;nc|ENSG00000008294|O60271-9|SPAG9 32.78568957990786 0.1150597335874693 4 [{I|L}P]R[EP]DVAV 9 6 + 45.78 0.0 0.0 4.6031 4.6031 72.468 0.0 0.0 0.0 3.2400094694615547 10.330145895351848 3.2400094694615547 3.2400094694615547 0 0.8182503180159344 1.6989700043360187 0.0 0.3494850021680094 [{I|L}P]R[EP]DVAV;{[DA]|[EG]}VK{M(Oxidation (M))|F}{M(Oxidation (M))|F}VAV;[{I|L}P]R[EP]VDAV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VKADVAV;{[VA]|[{I|L}G]}DK{M(Oxidation (M))|F}{M(Oxidation (M))|F}VAV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VAKDVAV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KVADVAV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VKAVDAV;[{I|L}P]R{I|L}[DP]DAV;[R{M(Oxidation (M))|F}]VAHPR{I|L} 4.6031;4.2773;3.9977;3.772;3.718;3.402;3.402;3.1666;3.0897;2.8699 -;+;-;-;-;-;-;-;-;- + 543 1 1.358 82846.6 1.0 12347 5017 17357 HBL1_DMSO_200M_050219_2,17366 HBL1_DMSO_200M_050219_2,17366,DAVKFFVAV True True DAVKFFVAV 92.16734 498.281420886517 21622818.0 17357.0 nc|ENSG00000008294|O60271-9|SPAG9;;nc|ENSG00000008294|O60271-4|SPAG9;;nc|ENSG00000008294|O60271-2|SPAG9;;ENSG00000008294|ENST00000262013|SPAG9 4.672930081685384 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17367 92.17 129.0 825760.0 25 0 103980.0 + 44747 YPLERGFIYV 10 81 628.8372056889573 1255.6598584447145 2 628.8379394412041 MULTI CID FTMS 0 0 0 17357 345393.34375 0.3052096340826938 -3 0.3417205810546875 10 Unmodified _YPLERGFIYV_ ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF 38.61474834105838 0.1721950110283317 4 YP{I|L}E 4 6 41.375 0.0 0.0 3.2951 0.0 0.0 0.0 750.3960665338499 750.3960665338499 0.189549981487076 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + YP{I|L}E 3.2951 + + 171 + 1 1.358 84282.1 1.0 12348 5017 17357 HBL1_DMSO_200M_050219_2,17367 HBL1_DMSO_200M_050219_2,17367,YPLERGFIYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17368 92.174 204.0 354900.0 25 0 34052.0 + + 24560 DARDILMQI 9 104 537.7851388853834 1073.555724837567 2 537.7845947146416 MULTI CID FTMS 0 0 0 17357 201872.75 1.0 0 0.0 11 Unmodified _MLEGVREQL_ ENSG00000162851|ENST00000366514|TFB2M 25.399314129420983 0.2080152500878129 4 D{I|L}{I|L}MQ{I|L} 6 -1 47.722 0.0 0.0 4.4452 0.0 0.0 342.1645985334 0.0 342.1645985334 0.0 19.48506789313896 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 D{I|L}{I|L}MQ{I|L} 4.4452 - 476 1 1.358 62817.0 1.0 12349 5017 17357 HBL1_DMSO_200M_050219_2,17368 HBL1_DMSO_200M_050219_2,17368,MLEGVREQL False False DARDILMQI 92.17389 537.784594714642 1456503.625 17357.0 ENSG00000162851|ENST00000366514|TFB2M 4.470600287119548 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17369 92.188 800.0 275260.0 25 0 41265.0 + 17206 KLLEEQGIFL 10 195 595.3450688998811 1188.675584866562 2 595.3455688357353 MULTI CID FTMS 0 0 0 17357 128326.3125 0.1386912468021024 -2 0.2680435180664062 12 Unmodified _KLLEEQGIFL_ ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4 73.1962812333195 0.0188336640735478 4 [K{I|L}]{I|L}EEQG{I|L}{M(Oxidation (M))|F}{I|L} 10 0 + 85.225 0.0 0.0 7.1697 7.1697 89.221 0.0 0.0 0.0 9.826155652630815 46.08857830256703 9.826155652630815 9.164539485499262 0 1.4291746928241125 0.619788758288394 1.9916440611282624 0.3494850021680094 + + [K{I|L}]{I|L}EEQG{I|L}{M(Oxidation (M))|F}{I|L};[K{I|L}]{I|L}EE[AG]G{I|L}{M(Oxidation (M))|F}{I|L};{I|L}{I|L}KEEQG{I|L}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}QEE{I|L}K{I|L}{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QA]E{I|L}K{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]GEE{I|L}K{I|L}{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GAAE{I|L}K{I|L}{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RD]G{I|L}K{I|L}{M(Oxidation (M))|F}{I|L};[K{I|L}]{I|L}EEQG{M(Oxidation (M))|F}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AEE{I|L}K{I|L}{M(Oxidation (M))|F}{I|L} 7.1697;6.3987;6.3113;6.1772;6.0408;5.8772;5.8343;5.6498;5.632;5.5611 +;-;-;-;-;-;-;-;-;- + 4859 1 1.358 160674.3 0.7300000190734863 12350 5017 17357 HBL1_DMSO_200M_050219_2,17369 HBL1_DMSO_200M_050219_2,17369,KLLEEQGIFL True True KLLEEQGIFL 92.187721 595.345568835735 13646853.0 17357.0 nc|ENSG00000127481|Q5T4S7-2|UBR4;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000127481|Q5T4S7-4|UBR4 5.809311072031657 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17370 92.202 800.0 505340.0 25 0 242120.0 20785 LLVLCWVTC 9 166 350.52344362031704 1048.548501461151 3 350.5236389040947 MULTI CID FTMS 0 0 0 17357 122801.3828125 0.1674296661439945 3 -0.297760009765625 13 Unmodified _LLVLCWVTC_ ENST00000606673.1_1_2:220602231-220602417:+|nuORF 15.847184025352805 0.4077185912009129 4 {I|L}{I|L}VEV 5 5 41.116 0.0 0.0 3.9212 0.0 0.0 0.0 492.1783846490844 492.1783846490844 12.611500145334588 0.0 0.0 0.0 0 0.2215141619232908 1.5228787452803376 0.0 0.0 {I|L}{I|L}VEV 3.9212 - 385 + 1 1.358 317294.3 0.5299999713897705 12351 5017 17357 HBL1_DMSO_200M_050219_2,17370 HBL1_DMSO_200M_050219_2,17370,LLVLCWVTC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17371 92.215 800.0 129130.0 25 0 9518.1 + 18165 KTSLSLTPDVP 11 151 579.3255546366498 1156.6365563400996 2 579.3258544802666 MULTI CID FTMS 0 0 0 17357 118113.796875 1.0 0 0.0 14 Unmodified _KTSLSLTPDVP_ ENSG00000138375|ENST00000357276|SMARCAL1 57.72198328787511 0.0783903820882629 4 {[TV]|[{I|L}S]}EPT{I|L}QAR 9 8 57.405 0.0 0.0 4.9631 0.0 0.0 0.0 158.06621877589956 158.06621877589956 33.3759123398972 0.0 0.0 0.0 0 0.0 2.0 1.4093793813122062 0.0 {[TV]|[{I|L}S]}EPT{I|L}QAR 4.9631 - 5073 1 1.358 79347.0 0.699999988079071 12352 5017 17357 HBL1_DMSO_200M_050219_2,17371 HBL1_DMSO_200M_050219_2,17371,KTSLSLTPDVP True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17372 92.229 800.0 162840.0 25 0 18349.0 + + 28301 DAPKAGQLEAWL 12 148 649.8407512003877 1297.6669494675753 2 649.8406249880791 MULTI CID FTMS 0 0 0 17357 114604.3359375 1.0 0 0.0 15 Unmodified _PRRGQWEAWL_ nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4 34.40172386719151 0.2166836008404837 4 {[QN]|[E{I|L}]|[KN]}KR[HM]DAW{I|L} 10 -1 + 68.333 0.0 0.0 5.2659 5.2659 69.573 0.0 0.0 0.0 1.6781202234563182 16.53212513775344 1.6781202234563182 0.4139268515822465 0 0.75 0.8860566476931632 0.3054621874040891 1.0501648626366045 {[QN]|[E{I|L}]|[KN]}KR[HM]DAW{I|L};{[QN]|[E{I|L}]|[KN]}KR[NG]PDAW{I|L};{[DA]|[EG]}[RV]QKPDAW{I|L};[VS]A{I|L}R[HM]DAW{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RH]V{I|L}{M(Oxidation (M))|F}AW{I|L};[KP]AAN{I|L}EADAW{I|L};{[SA]|[TG]}V{I|L}R[HM]DAW{I|L};[VS]A{I|L}R[NG]PDAW{I|L};{[QN]|[E{I|L}]|[KN]}K{[HG]|PP}C{I|L}EAW{I|L};{[SA]|[TG]}V{I|L}R[NG]PDAW{I|L} 5.2659;5.234;5.1365;5.0088;5.0017;4.9896;4.982;4.9796;4.9729;4.9528 -;-;-;-;-;-;-;-;-;- 6987 1 1.358 98776.5 0.6899999976158142 12353 5017 17357 HBL1_DMSO_200M_050219_2,17372 HBL1_DMSO_200M_050219_2,17372,PRRGQWEAWL False False DAPKAGQLEAWL 92.229223 649.840624988079 1182422.875 17357.0 nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4 2.4595042069753013 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17373 92.245 800.0 127250.0 25 0 24684.0 -1 WRLRRRRRRC 10 74 785.9629300226612 1569.9113071121224 2 785.9639770388603 MULTI CID FTMS 0 0 0 17357 110018.6875 1.0 0 0.0 16 Carbamidomethyl (C) _WRLRRRRRRC(Carbamidomethyl (C))_ ENST00000349431.10_1_1:1209083-1209236:-|nuORF 0.4007161486938917 0.7247829448918255 4 RD 2 -1 14.464 0.0 0.0 0.92132 0.0 0.0 454.2448775240349 841.4935396783811 1295.738417202416 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 RD 0.92132 - 142 + 1 1.358 74820.1 0.6399999856948853 12354 5017 17357 HBL1_DMSO_200M_050219_2,17373 HBL1_DMSO_200M_050219_2,17373,WRLRRRRRRC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17375 92.25 149.0 701110.0 25 0 79481.0 + 18361 KVPDVLPVL 9 86 490.3135492893367 978.6125456454736 2 490.3134643435478 MULTI CID FTMS 0 0 0 17374 405446.375 0.6183413354374462 2 -0.2027435302734375 1 Unmodified _KVPDVLPVL_ ENSG00000011007|ENST00000613537|ELOA;nc|ENSG00000011007|Q14241-1|ELOA 41.8396318013385 0.0653578398400075 4 [VP]{I|L}[QT]{I|L}PV{I|L} 9 4 + 58.056 0.0 0.0 5.9325 5.9325 72.44 0.0 0.0 0.0 17.579015433336167 24.86880000633434 17.579015433336167 0.4575749056067479 0 1.25 1.6989700043360187 0.0 0.3494850021680094 [VP]{I|L}[QT]{I|L}PV{I|L};[VP][WR]{I|L}PV{I|L};[VP]{I|L}SAA{I|L}PV{I|L};[VP]{I|L}S[RV]PV{I|L};[VP]{I|L}[WR]PV{I|L};[VP]D{I|L}[VP]KV{I|L};[VP]{I|L}D[VP]KV{I|L};[VP]{I|L}S[VP]RV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[VP]D{I|L}PV{I|L};[VP]{I|L}S[VP][VG]V{I|L} 5.9325;5.8858;5.7553;5.4202;5.2458;4.8598;4.5522;3.9369;3.3921;2.996 -;-;-;-;-;-;-;-;-;- 366 1 1.358 83352.7 1.0 12355 5018 17374 HBL1_DMSO_200M_050219_2,17375 HBL1_DMSO_200M_050219_2,17375,KVPDVLPVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17376 92.252 119.0 600240.0 25 0 54098.0 + 27710 YPLLISRI 8 86 487.3068622324066 972.5991715316133 2 487.8052551150322 MULTI CID FTMS 0 0 0 17374 392030.40625 0.7218831240798056 -7 0.799652099609375 2 Unmodified _PLLGFVSKL_ ENST00000474428.6_1_1:155922555-155932010:-|nuORF;ENST00000608543.1_1_1:155931890-155932010:-|nuORF;ENSG00000116584|ENST00000361247|ARHGEF2;nc|ENSG00000116584|Q92974-3|ARHGEF2;nc|ENSG00000116584|Q92974-2|ARHGEF2 13.50788311687929 0.4710407108020397 4 {I|L}{I|L}{I|L}P[SG] 6 6 28.416 0.0 0.0 2.9217 0.0 0.0 374.2281971662125 0.0 374.2281971662125 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L}P[SG] 2.9217 - 91 1 1.358 59428.4 1.0 12356 5018 17374 HBL1_DMSO_200M_050219_2,17376 HBL1_DMSO_200M_050219_2,17376,PLLGFVSKL False False YPLLISRI 92.252133 487.805255115032 16213358.0 17374.0 ENST00000474428.6_1_1:155922555-155932010:-|nuORF;;ENST00000608543.1_1_1:155931890-155932010:-|nuORF;;ENSG00000116584|ENST00000361247|ARHGEF2;;nc|ENSG00000116584|Q92974-3|ARHGEF2;;nc|ENSG00000116584|Q92974-2|ARHGEF2 2.628043611844381 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17377 92.255 158.0 718640.0 25 0 102410.0 + 3182 AVVLPLARI 9 94 476.32115162604936 950.6277503188988 2 476.3215209841728 MULTI CID FTMS 0 0 0 17374 499879.0625 0.2937771612188795 -4 0.436737060546875 3 Unmodified _AVVLPLARI_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 48.345845343767074 0.0439967357579942 4 {[VA]|[{I|L}G]}V{I|L}{I|L}PAR{I|L} 9 2 + 74.784 0.0 0.0 7.8668 7.8668 83.59 0.0 0.0 0.0 53.089323596742176 11.688398452654395 11.688398452654395 3.0102999566398125 0 1.424742501084005 1.6989700043360187 0.0 0.4247425010840047 {[VA]|[{I|L}G]}V{I|L}{I|L}PAR{I|L};{[VA]|[{I|L}G]}V{I|L}P{I|L}AR{I|L};{[VA]|[{I|L}G]}{I|L}V{I|L}PAR{I|L};{[VA]|[{I|L}G]}{I|L}VP{I|L}AR{I|L};{[VA]|[{I|L}G]}V{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]{I|L};{[VA]|[{I|L}G]}{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]{I|L} 7.8668;7.5501;7.471;7.1543;4.5552;4.1594 -;+;-;-;-;- + 470 + 1 1.358 93445.1 1.0 12357 5018 17374 HBL1_DMSO_200M_050219_2,17377 HBL1_DMSO_200M_050219_2,17377,AVVLPLARI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17378 92.261 305.0 417660.0 25 0 23882.0 5994 DRLPDHSMVQI 11 136 655.828117297093 1309.6416816609858 2 655.8279907107353 MULTI CID FTMS 0 0 0 17374 333394.375 0.6552617538116814 -1 0.0950164794921875 4 Unmodified _DRLPDHSMVQI_ ENSG00000183580|ENST00000504595|FBXL7;nc|ENSG00000183580|Q9UJT9-2|FBXL7 17.44264345198275 0.6723198055858692 4 {[TV]|[{I|L}S]}VWE[YC(Carbamidomethyl (C))]{I|L}Q{I|L} 10 8 + 44.333 0.0 0.0 3.3851 3.3851 65.898 0.0 0.0 0.0 1.9449083618042948 8.66319406694884 1.9449083618042948 1.9449083618042948 0 0.3494850021680094 1.0 0.4876954943324546 0.0 {[TV]|[{I|L}S]}VWE[YC(Carbamidomethyl (C))]{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}C(Carbamidomethyl (C))V[YC(Carbamidomethyl (C))]{I|L}Q{I|L};[AG]{I|L}P{M(Oxidation (M))|F}E[YC(Carbamidomethyl (C))]{I|L}Q{I|L};[Q{I|L}]P{M(Oxidation (M))|F}E[YC(Carbamidomethyl (C))]{I|L}Q{I|L};{[TV]|[{I|L}S]}VWEQ{[TV]|[{I|L}S]}[WY];{[TV]|[{I|L}S]}VWE[YC(Carbamidomethyl (C))]{I|L}[AG]{I|L};[VS]{I|L}WE[YC(Carbamidomethyl (C))]{I|L}Q{I|L};[PA]{I|L}G{M(Oxidation (M))|F}E[YC(Carbamidomethyl (C))]{I|L}Q{I|L};[VG]A[C(Carbamidomethyl (C))K]V[YC(Carbamidomethyl (C))]{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}C(Carbamidomethyl (C))VQ{[TV]|[{I|L}S]}[WY] 3.3851;3.2366;3.2245;3.2137;2.7232;2.6854;2.6226;2.6205;2.588;2.5747 -;-;-;-;-;-;-;-;-;- 4695 1 1.358 101897.6 1.0 12358 5018 17374 HBL1_DMSO_200M_050219_2,17378 HBL1_DMSO_200M_050219_2,17378,DRLPDHSMVQI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17379 92.269 468.0 279400.0 25 0 43221.0 + 15549 IPWKVPGL 8 112 455.2812183471041 908.5478837610084 2 455.2816345095634 MULTI CID FTMS 0 0 0 17374 282558.625 1.0 0 0.0 5 Unmodified _IPWKVPGL_ ENSG00000174231|ENST00000304992|PRPF8 42.96799951952854 0.1846367511955703 4 {I|L}PWKVPG{I|L} 8 0 + 71.986 0.0 0.0 7.9232 7.9232 90.331 0.0 0.0 0.0 32.037756108469395 13.21456278567765 13.21456278567765 8.789850105233292 0 0.5891368308784531 2.0 0.0 0.0 + + {I|L}PWKVPG{I|L};WP{I|L}KVPG{I|L};{I|L}{I|L}[TA]VK[HQ];{I|L}{I|L}{[SA]|[TG]}K{I|L}[HQ] 7.9232;6.9558;4.784;2.5902 +;-;-;- + 317 + 1 1.358 103467.1 1.0 12359 5018 17374 HBL1_DMSO_200M_050219_2,17379 HBL1_DMSO_200M_050219_2,17379,IPWKVPGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17380 92.275 329.0 207370.0 25 0 47506.0 21158 LPASPSLY 8 76 424.23352907926807 846.4525052253362 2 424.2334167361259 MULTI CID FTMS 0 0 0 17374 283723.375 1.0 0 0.0 6 Unmodified _LPASPSLY_ ENST00000361813.5_1_1:156246889-156247006:-|nuORF 10.183394434864962 0.7604730176254005 4 {I|L}{I|L}[VP]{[QD]|[EN]|[WG]|[KD]|[RS]}Y 7 4 + 22.803 0.0 0.0 2.694 2.694 69.404 0.0 0.0 0.0 9.308641390345116 1.8343912819446475 1.8343912819446475 4.898641557451523 0 0.0 0.0 0.3807196863200844 0.0 {I|L}{I|L}[VP]{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{[WT]|[RM]}H[YK]{I|L} 2.694;2.1153 -;- 39 + 1 1.358 60211.3 1.0 12360 5018 17374 HBL1_DMSO_200M_050219_2,17380 HBL1_DMSO_200M_050219_2,17380,LPASPSLY False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17381 92.28 274.0 700280.0 25 0 303900.0 -1 0 104 498.3415026919146 497.3342262253146 1 498.3412048220634 MULTI CID FTMS 0 0 0 17374 245155.90625 1.0 0 0.0 7 4 {I|L}PR{I|L} 4 -1 + 58.558 0.0 0.0 11.774 11.774 89.289 0.0 0.0 0.0 26.936242784744408 4.972931682326163 4.972931682326163 4.972931682326163 0 0.805462187404089 1.6989700043360187 0.0 0.5 {I|L}PR{I|L};{I|L}P{I|L}R;[{I|L}P]R{I|L} 11.774;10.775;9.2206 -;-;- 79 + 1 1.358 151865.4 1.0 12361 5018 17374 HBL1_DMSO_200M_050219_2,17381 HBL1_DMSO_200M_050219_2,17381, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17382 92.294 800.0 314160.0 25 0 43507.0 20184 LLACFLILI 9 192 509.82188692284745 1017.6292209124948 2 509.8186218142509 MULTI CID FTMS 0 0 0 17374 162445.734375 0.3171034670560046 2 -0.2027435302734375 8 Unmodified _LLACFLILI_ ENST00000561424.5_1_15:45009826-45011035:+|nuORF 45.7499826716795 0.0496882803020414 4 {I|L}{I|L}[YR]EV{I|L}{I|L} 8 5 + 46.348 0.0 0.0 4.5545 4.5545 68.295 0.0 0.0 0.0 1.446695918504339 14.904630595263413 1.446695918504339 1.249387366082999 0 0.3494850021680094 2.0 0.0 0.0 {I|L}{I|L}[YR]EV{I|L}{I|L};{I|L}{I|L}[YR]D{I|L}{I|L}{I|L};[HV]PV{I|L}EV{I|L}{I|L};[HV]PV{I|L}D{I|L}{I|L}{I|L};[VP]HV{I|L}EV{I|L}{I|L};{I|L}{I|L}[YG]VEV{I|L}{I|L};{I|L}{I|L}[YR]{I|L}D{I|L}{I|L};[VP]HV{I|L}D{I|L}{I|L}{I|L};{I|L}{I|L}[YG]VD{I|L}{I|L}{I|L};[HV]PV{I|L}{I|L}D{I|L}{I|L} 4.5545;4.4318;4.4124;4.2896;4.1704;4.1678;4.1359;4.0476;4.045;3.9938 -;-;-;-;-;-;-;-;-;- 5029 1 1.358 189190.2 0.7300000190734863 12362 5018 17374 HBL1_DMSO_200M_050219_2,17382 HBL1_DMSO_200M_050219_2,17382,LLACFLILI True False ILDPHVVLL 92.293929 509.818621814251 4365254.5 17374.0 ENST00000574867.5_1_17:5292093-5322970:-|nuORF;;ENSG00000108559|ENST00000573584|NUP88 4.689027150472005 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17383 92.308 800.0 208410.0 25 0 14640.0 + 41447 VPLLVKVI 8 143 440.8151801144748 879.6158072957496 2 440.8156310915947 MULTI CID FTMS 0 0 0 17374 127997.6015625 0.4516400597243422 -2 0.2306365966796875 9 Unmodified _VPLLVKVI_ ENSG00000137040|ENST00000259569|RANBP6 74.39630413441286 0.1057069479668299 4 VP{I|L}{I|L}VKV{I|L} 8 0 + 76.284 0.0 0.0 8.6724 8.6724 88.629 0.0 0.0 0.0 28.62826806974688 5.642714304385635 5.642714304385635 5.642714304385635 0 2.0356668758921828 1.2218487496163564 0.0 0.3054621874040891 + + VP{I|L}{I|L}VKV{I|L};VP{I|L}{I|L}VK{I|L}V 8.6724;8.0309 +;- + 462 + 1 1.358 131911.9 0.5899999737739563 12363 5018 17374 HBL1_DMSO_200M_050219_2,17383 HBL1_DMSO_200M_050219_2,17383,VPLLVKVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17384 92.322 800.0 232290.0 25 0 17500.0 + 16360 IYPEVVHMF 9 180 567.7858476241408 1133.5571423150816 2 567.7870971560478 MULTI CID FTMS 0 0 0 17374 130660.53125 0.8719897033090206 3 -0.2746963500976562 10 Unmodified _IYPEVVHMF_ ENSG00000078304|ENST00000694906|PPP2R5C;ENST00000553730.5_1_14:102276279-102348623:+|nuORF;nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C 30.22481116460888 0.1466181017706357 4 [Y{I|L}]PEVVHM{M(Oxidation (M))|F} 9 0 + 51.653 0.0 0.0 4.5568 4.5568 78.364 0.0 0.0 0.0 23.315468932362577 5.106442888633254 5.106442888633254 8.86189449565073 0 0.6861818737241735 2.0 0.0 0.0 + + [Y{I|L}]PEVVHM{M(Oxidation (M))|F};[Y{I|L}]PEVV[DN]SV;[Y{I|L}]PEV[R{M(Oxidation (M))|F}][NP];[Y{I|L}]PE[R{M(Oxidation (M))|F}]NPV;[Y{I|L}]PE[R{M(Oxidation (M))|F}]V[NP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EVVHM{M(Oxidation (M))|F};[Y{I|L}]P{[MG]|[TS]}M{I|L}NPV;[Y{I|L}]PE[R{M(Oxidation (M))|F}]GGPV;[Y{I|L}]P{[MG]|[TS]}M{I|L}V[NP];[Y{I|L}]{[RE]|[WV]}[KC][WH] 4.5568;3.775;2.6951;2.5919;2.5398;1.8866;1.8138;1.7796;1.7617;1.7551 +;-;-;-;-;-;-;-;-;- + 3304 + 1 1.358 143089.8 0.699999988079071 12364 5018 17374 HBL1_DMSO_200M_050219_2,17384 HBL1_DMSO_200M_050219_2,17384,IYPEVVHMF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17385 92.337 800.0 86519.0 25 0 11380.0 + 37667 TLMKQYIEFV 10 118 636.3379414000159 1270.6613298668317 2 636.3386108279228 MULTI CID FTMS 0 0 0 17374 121968.7421875 1.0 0 0.0 11 Unmodified _TLMKQYIEFV_ ENSG00000171848|ENST00000304567|RRM2;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;nc|ENSG00000171848|P31350-2|RRM2 28.49450938151212 0.328477364964909 4 [{I|L}T][YQ]RMT{I|L}{M(Oxidation (M))|F}V 10 6 + 61.546 0.0 0.0 4.8436 4.8436 73.226 0.0 0.0 0.0 3.111206103324733 16.53212513775344 3.111206103324733 3.111206103324733 0 0.8252574989159953 2.0 0.566901560044258 0.0 [{I|L}T][YQ]RMT{I|L}{M(Oxidation (M))|F}V;[Y{I|L}][{M(Oxidation (M))|F}V]{I|L}E{I|L}E{M(Oxidation (M))|F}V;[Y{I|L}][{M(Oxidation (M))|F}V]{I|L}EE{I|L}{M(Oxidation (M))|F}V;[Y{I|L}][KQ]MT{I|L}E{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[YQ]KMT{I|L}{M(Oxidation (M))|F}V;[{I|L}T][YQ][VG]MT{I|L}{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}A[YG]KMT{I|L}{M(Oxidation (M))|F}V;[Y{I|L}][KQ]MTE{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]KMT{I|L}{M(Oxidation (M))|F}V;[Y{I|L}][KQ]MET{I|L}{M(Oxidation (M))|F}V 4.8436;4.5988;4.3619;4.2233;4.147;4.1224;4.0521;3.9864;3.7715;3.7495 -;-;-;-;-;-;-;-;-;- 1042 1 1.358 61625.5 0.7300000190734863 12365 5018 17374 HBL1_DMSO_200M_050219_2,17385 HBL1_DMSO_200M_050219_2,17385,TLMKQYIEFV False True TLMKQYIEFV 92.336891 636.338610827923 961722.0625 17374.0 ENSG00000171848|ENST00000304567|RRM2;;ENST00000426279.1_1_X:44168653-44169127:-|nuORF;;nc|ENSG00000171848|P31350-2|RRM2 5.913971900939941 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17386 92.351 800.0 99025.0 25 0 7389.5 + 11758 GLKDERDCVGL 11 121 402.2060971178446 1203.5964619537338 3 402.2054626345634 MULTI CID FTMS 0 0 0 17374 102691.59375 1.0 0 0.0 12 Unmodified _GLKDERDCVGL_ REV__ENST00000563332.6_1_16:4562186-4562369:-|nuORF 16.149105407346934 0.6992268271266642 4 R{I|L} 2 -1 24.196 0.0 0.0 2.0103 0.0 0.0 916.4137705773242 0.0 916.4137705773242 0.0 21.096981436199016 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.5 R{I|L} 2.0103 - 52 1 1.358 63247.0 0.4900000095367431 12366 5018 17374 HBL1_DMSO_200M_050219_2,17386 HBL1_DMSO_200M_050219_2,17386,GLKDERDCVGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17388 92.355 2.3 20685000.0 25 0 3576900.0 + 24791 MPIKINLI 8 68 471.2962935842053 940.5780342352108 2 471.2967407107353 MULTI CID FTMS 0 0 0 17387 25467956.0 1.0 0 0.0 1 Unmodified _MPIKINLI_ ENSG00000134001|ENST00000256383|EIF2S1 40.44857923139169 0.2267865117615937 4 [{I|L}P]K{I|L}N{I|L}{I|L}M 8 2 + 58.37 0.0 0.0 6.2058 6.2058 87.232 0.0 0.0 0.0 13.259132899720512 10.389180660303694 10.389180660303694 9.262137858390815 0 0.0 1.6989700043360187 0.0 0.8807196863200843 [{I|L}P]K{I|L}N{I|L}{I|L}M;[{I|L}P]K{I|L}GG{I|L}{I|L}M;MP{I|L}[R{I|L}]RR;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KP{I|L}{I|L}M 6.2058;5.221;4.5863;3.9283 -;-;-;- 156 1 1.354 44929.5 1.0 12367 5019 17387 HBL1_DMSO_200M_050219_2,17388 HBL1_DMSO_200M_050219_2,17388,MPIKINLI False True MPIKINLI 92.355086 471.296740710735 803496192.0 17387.0 ENSG00000134001|ENST00000256383|EIF2S1 0.3349645733833313 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17389 92.356 3.7 15809000.0 25 0 1559700.0 + 29290 QIFNGTFVKL 10 91 583.8321631749548 1165.6497734167094 2 583.8325683474541 MULTI CID FTMS 0 0 0 17387 15407167.0 1.0 0 0.0 2 Unmodified _QIFNGTFVKL_ ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF 36.506200033944 0.1944608063770638 4 [Q{I|L}]{M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L} 10 0 + 55.189 0.0 0.0 4.7346 4.7346 79.51 0.0 0.0 0.0 29.2420871249399 10.962408376219251 10.962408376219251 9.164539485499247 0 0.3054621874040891 1.6989700043360187 0.0 0.5649093276264391 + + [Q{I|L}]{M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L};[Q{I|L}]{M(Oxidation (M))|F}GG{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L} 4.7346;3.9484 +;- + 294 + 1 1.354 47841.6 1.0 12368 5019 17387 HBL1_DMSO_200M_050219_2,17389 HBL1_DMSO_200M_050219_2,17389,QIFNGTFVKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17390 92.357 28.0 1655400.0 25 0 515430.0 + 25675 NGIKVLLI 8 61 435.2945606477974 868.5745683623949 2 435.2946960330009 MULTI CID FTMS 0 0 0 17387 2087692.875 1.0 0 0.0 3 Unmodified _NGIKVLLI_ ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 38.15118350030904 0.2652218139009398 4 [NG]{I|L}KV{I|L}{I|L}{I|L} 8 0 + 52.695 0.0 0.0 6.0669 6.0669 88.348 0.0 0.0 0.0 13.258663135565705 10.172203223519531 10.172203223519531 13.258663135565705 0 0.7429928190999391 0.958607314841775 0.0 0.805462187404089 + + [NG]{I|L}KV{I|L}{I|L}{I|L};{I|L}{I|L}WV{I|L}{I|L}{I|L};{I|L}{I|L}AA[KQ]{I|L}{I|L} 6.0669;4.5404;1.1958 +;-;- + 56 1 1.354 43309.7 1.0 12369 5019 17387 HBL1_DMSO_200M_050219_2,17390 HBL1_DMSO_200M_050219_2,17390,NGIKVLLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17391 92.359 40.0 908830.0 25 0 68562.0 + 34084 SLLGDDALVQV 11 74 565.3080515033486 1128.601550073497 2 565.3087036013603 MULTI CID FTMS 0 0 0 17387 1390398.25 0.6358483268430976 2 -0.1685638427734375 4 Unmodified _SLLGDDALVQV_ ENSG00000189091|ENST00000302516|SF3B3;ENST00000568291.2_1_16:70588380-70590279:+|nuORF 47.74868867922204 0.1300977870992118 4 {NN|[MP]|[D{I|L}]|[EV]}AVDAS{I|L} 8 8 47.12 0.0 0.0 4.1751 0.0 0.0 0.0 341.1788565522658 341.1788565522658 19.44405767821636 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 1.25 0.0 {NN|[MP]|[D{I|L}]|[EV]}AVDAS{I|L} 4.1751 - 236 1 1.354 37882.1 1.0 12370 5019 17387 HBL1_DMSO_200M_050219_2,17391 HBL1_DMSO_200M_050219_2,17391,SLLGDDALVQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17392 92.36 57.0 1103000.0 25 0 152340.0 + 3920 DALGKLISI 9 84 465.2869827307355 928.559412528271 2 465.2874023318291 MULTI CID FTMS 0 0 0 17387 1210350.375 0.0806557946807375 3 -0.2841720581054687 5 Unmodified _DALGKLISI_ ENSG00000089154|ENST00000300648|GCN1 59.36838082759317 0.0264317782606298 4 {[DA]|[EG]}{I|L}GK{I|L}{I|L}S{I|L} 9 0 + 64.733 0.0 0.0 6.9713 6.9713 92.462 0.0 0.0 0.0 25.92741212309626 14.09256854528806 14.09256854528806 16.8753063169585 0 1.8539171939081167 2.0 0.6861818737241735 0.0 + + {[DA]|[EG]}{I|L}GK{I|L}{I|L}S{I|L};{[DA]|[EG]}{I|L}GK{I|L}{I|L}{[TV]|[{I|L}S]};{I|L}{I|L}KG{[DA]|[EG]}{I|L}{[TV]|[{I|L}S]};{I|L}{I|L}KG{I|L}{[DA]|[EG]}{[TV]|[{I|L}S]};[KG]{I|L}{I|L}{[DA]|[EG]}{I|L}{[TV]|[{I|L}S]};[KG]{I|L}{I|L}{I|L}{[DA]|[EG]}{[TV]|[{I|L}S]};[KG]{I|L}{[DA]|[EG]}{I|L}{I|L}{[TV]|[{I|L}S]};{I|L}{I|L}[VG]{[QS]|[NT]}{I|L}{[TV]|[{I|L}S]} 6.9713;5.1539;2.2865;2.2007;2.0922;2.0064;1.7728;0.67668 +;+;-;-;-;-;-;- + 197 + 1 1.354 51582.8 1.0 12371 5019 17387 HBL1_DMSO_200M_050219_2,17392 HBL1_DMSO_200M_050219_2,17392,DALGKLISI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17393 92.361 42.0 1100600.0 25 0 140250.0 + 19453 LFEFILYL 8 66 529.3001695460804 1056.585786158961 2 529.3005859255791 MULTI CID FTMS 0 0 0 17387 918274.125 0.842882596515037 3 -0.2841720581054687 6 Unmodified _LFEFILYL_ REV__ENSG00000170312|ENST00000395284|CDK1;REV__ENST00000475504.6_1_10:62539923-62545554:+|nuORF;REV__nc|ENSG00000170312|P06493-2|CDK1 24.67388899826682 0.525179942228231 4 N{I|L}V{I|L}Y{I|L} 6 -1 37.58 0.0 0.0 3.5568 0.0 0.0 323.1499195783219 0.0 323.1499195783219 0.0 4.2165906731557286 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.3807196863200844 N{I|L}V{I|L}Y{I|L} 3.5568 - 161 1 1.354 44432.8 1.0 12372 5019 17387 HBL1_DMSO_200M_050219_2,17393 HBL1_DMSO_200M_050219_2,17393,LFEFILYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17394 92.363 59.0 891840.0 25 0 140550.0 + 36161 SVVESVFKL 9 68 504.2923761875836 1006.5701994419672 2 504.2923156619072 MULTI CID FTMS 0 0 0 17387 608979.4375 0.0984621181291048 3 -0.2841720581054687 7 Unmodified _SVVESVFKL_ ENSG00000242372|ENST00000374450|EIF6;nc|ENSG00000242372|P56537-2|EIF6 38.17557092003332 0.0854718145212029 4 [VS]VESV{M(Oxidation (M))|F}K{I|L} 9 0 + 76.164 0.0 0.0 7.5667 7.5667 96.333 0.0 0.0 0.0 49.96584697476848 12.98332479720628 12.98332479720628 62.06099712019479 0 0.7742275032520141 2.0 0.3807196863200844 0.0 + + [VS]VESV{M(Oxidation (M))|F}K{I|L};[R{M(Oxidation (M))|F}][R{I|L}][CS]{I|L}{I|L} 7.5667;1.4011 +;- + 85 + 1 1.354 48038.1 1.0 12373 5019 17387 HBL1_DMSO_200M_050219_2,17394 HBL1_DMSO_200M_050219_2,17394,SVVESVFKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17395 92.365 97.0 552920.0 25 0 68929.0 + 1497 ALGRRTPAVA 10 96 506.3079274223521 1010.6013019115044 2 506.3086120486259 MULTI CID FTMS 0 0 0 17387 506948.53125 0.1084278791567304 4 -0.406707763671875 8 Unmodified _ALGRRTPAVA_ REV__ENST00000377824.8_1_9:37422741-37431094:+|nuORF;REV__ENST00000497693.1_1_9:37430482-37431094:+|nuORF;REV__nc|ENSG00000137106|Q9UBQ7-2|GRHPR 19.256988751693697 0.5244284437930726 4 [{I|L}A]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L} 6 -1 29.754 0.0 0.0 2.9442 0.0 0.0 0.0 324.1587008111938 324.1587008111938 5.580824061503975 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 [{I|L}A]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L} 2.9442 - 291 + 1 1.354 47384.0 1.0 12374 5019 17387 HBL1_DMSO_200M_050219_2,17395 HBL1_DMSO_200M_050219_2,17395,ALGRRTPAVA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17396 92.367 100.0 828910.0 25 0 104860.0 20084 LIWIWQHL 8 80 554.8167007101645 1107.6188484871288 2 554.8169433474541 MULTI CID FTMS 0 0 0 17387 490598.8125 0.4629272766710768 2 -0.1685638427734375 9 Unmodified _LIWIWQHL_ ENST00000443617.6_1_15:63991168-63999029:-|nuORF 11.114462752807354 0.7467182956244686 4 VD 2 8 30.555 0.0 0.0 2.7586 0.0 0.0 0.0 890.5018579273143 890.5018579273143 9.340391233510385 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 VD 2.7586 - 74 + 1 1.354 67423.6 1.0 12375 5019 17387 HBL1_DMSO_200M_050219_2,17396 HBL1_DMSO_200M_050219_2,17396,LIWIWQHL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17397 92.369 121.0 275590.0 25 0 63868.0 + 20897 LMSLPFRLI 9 57 545.3299636624265 0 545.3292724490166 PEAK CID FTMS 0 0 0 17387 452004.28125 1.0 0 0.0 10 Unmodified _LMSLPFRLI_ REV__ENSG00000023839|ENST00000647814|ABCC2 7.910154910731844 0.3362437653303669 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.64205 0.0 0.0 242.21704294809663 696.3413179986936 938.5583609467903 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.64205 + + 5 + 1 1.354 34889.3 1.0 12376 5019 17387 HBL1_DMSO_200M_050219_2,17397 HBL1_DMSO_200M_050219_2,17397,LMSLPFRLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17398 92.372 135.0 328570.0 25 0 38290.0 + 21522 LPIPESQVITI 11 62 605.3582984190366 1208.702043904873 2 605.3583862185478 MULTI CID FTMS 0 0 0 17387 400729.75 1.0 0 0.0 11 Unmodified _LPIPESQVITI_ ENSG00000130313|ENST00000252603|PGLS 38.17557092003332 0.2405003631267018 4 [EP]SQV{I|L}P{I|L}{I|L}T{I|L} 11 6 + 58.748 0.0 0.0 4.8604 4.8604 78.911 0.0 0.0 0.0 2.852135717294466 34.31087035850009 2.852135717294466 7.884195322812779 0 0.7742275032520141 0.0 0.4247425010840047 0.3807196863200844 [EP]SQV{I|L}P{I|L}{I|L}T{I|L};[{I|L}T]YY{I|L}P{I|L}{I|L}T{I|L};[{I|L}P]{I|L}{[ES]|[DT]|[{I|L}C]}NP{I|L}{I|L}T{I|L};[EP]S[AG]V{I|L}P{I|L}{I|L}T{I|L};{[QS]|[NT]}[EP]V{I|L}P{I|L}{I|L}T{I|L};[{I|L}P]{I|L}{[ES]|[DT]|[{I|L}C]}[QP]V{I|L}T{I|L};[{I|L}P]{I|L}{[ES]|[DT]|[{I|L}C]}GGP{I|L}{I|L}T{I|L};[{I|L}T][KC][HA]P{I|L}{I|L}T{I|L};[{I|L}T][KC][YR]V{I|L}T{I|L};[EP]S{I|L}{I|L}NP{I|L}{I|L}T{I|L} 4.8604;4.2081;4.1143;3.7902;3.6061;3.3302;3.0441;3.0187;2.9929;2.7086 -;-;-;-;-;-;-;-;-;- 265 1 1.354 38387.7 1.0 12377 5019 17387 HBL1_DMSO_200M_050219_2,17398 HBL1_DMSO_200M_050219_2,17398,LPIPESQVITI False True LPIPESQVITI 92.372232 605.358386218548 7943741.0 17387.0 ENSG00000130313|ENST00000252603|PGLS 5.00866683324178 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17399 92.384 677.0 312220.0 25 0 33284.0 + + 13899 FVFGDENGTVSL 12 167 642.8087684753095 1283.602984017419 2 642.8093749880791 MULTI CID FTMS 0 0 0 17387 337977.8125 0.5153302713895161 -2 0.2011489868164062 12 Unmodified _HVTYLCCFSVL_ ENSG00000116455|ENST00000235090|WDR77;nc|ENSG00000116455|Q9BQA1-2|WDR77 27.628801355627647 0.4434699450731472 4 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[WD]NGT[W{I|L}] 10 -1 + 39.509 0.0 0.0 3.0779 3.0779 64.442 0.0 0.0 0.0 0.8175623520757824 -1.6175370112596212 -1.6175370112596212 1.7132719856085288 0 0.3807196863200844 2.0 0.5 0.5629529932484498 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[WD]NGT[W{I|L}];[RP]V{[C(Carbamidomethyl (C))E]|[WC]}T[WH]S{I|L};[{M(Oxidation (M))|F}V][WD]{M(Oxidation (M))|F}NGT[W{I|L}];[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[DG]{[WN]|[YH]}T[W{I|L}];[HV]VE{[YD]|[{M(Oxidation (M))|F}M]}[WH]S{I|L};{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}H]|[RQ]}G{[YD]|[{M(Oxidation (M))|F}M]}EV{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}A]WNG{[YD]|[{M(Oxidation (M))|F}M]}EV{[MS]|[{M(Oxidation (M))|F}A]};[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[WD]GGGT[W{I|L}];[{M(Oxidation (M))|F}V][HT]G{[YD]|[{M(Oxidation (M))|F}M]}EV{[MS]|[{M(Oxidation (M))|F}A]};[{M(Oxidation (M))|F}V][HT]G{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}[W{I|L}] 3.0779;2.9445;2.8434;2.2121;2.154;1.9826;1.9799;1.9254;1.904;1.9 -;-;-;-;-;-;-;-;-;- 5372 1 1.354 156137.4 1.0 12378 5019 17387 HBL1_DMSO_200M_050219_2,17399 HBL1_DMSO_200M_050219_2,17399,HVTYLCCFSVL False False FVFGDENGTVSL 92.384022 642.809374988079 5734580.0 17387.0 ENSG00000116455|ENST00000235090|WDR77;;nc|ENSG00000116455|Q9BQA1-2|WDR77 5.282827377319336 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17400 92.388 181.0 470430.0 25 0 56829.0 26865 PCWIFASL 8 100 936.4622981750284 935.4550217084284 1 936.4671508669852 MULTI CID FTMS 0 0 0 17387 225930.265625 1.0 0 0.0 13 Unmodified _PCWIFASL_ ENST00000391832.7_1_19:50376502-50380356:-|nuORF;ENST00000391835.1_1_19:50380242-50380356:-|nuORF 26.34127834903884 0.4900704351052977 4 {[CP]|[EA]}GE{M(Oxidation (M))|F}A{I|L}S{I|L} 9 3 + 69.817 0.0 0.0 7.4635 7.4635 77.68 0.0 0.0 0.0 0.4575749056067479 16.478174818886373 0.4575749056067479 0.4575749056067479 0 0.2614393726401688 0.0 1.860924374808178 0.0 {[CP]|[EA]}GE{M(Oxidation (M))|F}A{I|L}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{M(Oxidation (M))|F}A{I|L}S{I|L};{[CP]|[EA]}GE{M(Oxidation (M))|F}AS{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{M(Oxidation (M))|F}AS{I|L}{I|L};{[CP]|[EA]}AD{M(Oxidation (M))|F}A{I|L}S{I|L};{[CP]|[EA]}AD{M(Oxidation (M))|F}AS{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}EADAS{I|L}{I|L};{[CP]|[EA]}GE{M(Oxidation (M))|F}{I|L}AS{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}E{M(Oxidation (M))|F}{I|L}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}EADA{I|L}S{I|L} 7.4635;7.4145;7.1837;7.1348;6.9534;6.6737;6.3674;6.2491;6.2001;6.1931 -;-;-;-;-;-;-;-;-;- 3452 1 1.354 59604.2 1.0 12379 5019 17387 HBL1_DMSO_200M_050219_2,17400 HBL1_DMSO_200M_050219_2,17400,PCWIFASL False True DAAEFAISI 92.387551 936.467150866985 3396734.0 17387.0 ENSG00000141968|ENST00000602142|VAV1;;nc|ENSG00000141968|P15498-2|VAV1 1.7135790785153706 1.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17401 92.394 351.0 283630.0 25 0 27950.0 -1 0 84 727.3299090855496 726.3226326189496 1 727.3305541872978 MULTI CID FTMS 0 0 0 17387 214476.171875 1.0 0 0.0 14 4 {[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}EG{I|L} 6 -1 + 55.45 0.0 0.0 7.6344 7.6344 83.642 0.0 0.0 0.0 6.435078169319297 16.197887582883936 6.435078169319297 3.208253071758876 0 1.1307196863200843 0.0 0.8737125054200234 0.0 {[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}EG{I|L};{[{M(Oxidation (M))|F}D]|MM}E{M(Oxidation (M))|F}G{I|L};[{M(Oxidation (M))|F}E]D{M(Oxidation (M))|F}G{I|L};{[{M(Oxidation (M))|F}D]|MM}EG{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}D]|MM}AD{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}E]DG{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}E]GD{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}D]|MM}EG{I|L}{M(Oxidation (M))|F};{[DA]|[EG]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}D]|MM}GE{M(Oxidation (M))|F}{I|L} 7.6344;7.1927;6.7484;5.928;5.5074;5.4837;5.0631;4.8478;4.6487;4.436 -;-;-;-;-;-;-;-;-;- 609 1 1.354 85410.0 1.0 12380 5019 17387 HBL1_DMSO_200M_050219_2,17401 HBL1_DMSO_200M_050219_2,17401, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17402 92.397 133.0 371290.0 25 0 57786.0 + 14399 IFIDEVDSL 9 89 525.7723758737706 1049.530198814341 2 525.7733032107353 MULTI CID FTMS 0 0 0 17387 221525.4375 1.0 0 0.0 15 Unmodified _IFIDEVDSL_ ENSG00000021574|ENST00000315285|SPAST;ENSG00000132612|ENST00000254950|VPS4A;ENST00000562754.1_1_16:69353414-69354673:+|nuORF;nc|ENSG00000021574|Q9UBP0-2|SPAST;nc|ENSG00000021574|Q9UBP0-3|SPAST;nc|ENSG00000021574|Q9UBP0-4|SPAST 13.50788311687929 0.4710407108020397 4 S{I|L} 2 7 21.454 0.0 0.0 2.0441 0.0 0.0 831.402938537777 0.0 831.402938537777 0.0 7.95880017344075 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + S{I|L} 2.0441 + + 96 + 1 1.354 44855.7 1.0 12381 5019 17387 HBL1_DMSO_200M_050219_2,17402 HBL1_DMSO_200M_050219_2,17402,IFIDEVDSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17403 92.404 442.0 191300.0 25 0 44200.0 + 26516 NVIDNLIV 8 110 450.2640834398602 898.5136139465204 2 450.2639648318291 MULTI CID FTMS 0 0 0 17387 150436.828125 0.9609151889751756 -1 0.1061325073242187 16 Unmodified _NVIDNLIV_ ENSG00000143621|ENST00000361891|ILF2 48.345845343767074 0.1470278396477103 4 [VG]GEVN{I|L}{I|L}V 9 4 + 48.655 0.0 0.0 5.415 5.415 75.212 0.0 0.0 0.0 5.808706922580242 9.889917747712644 5.808706922580242 3.0102999566398125 0 0.6549471895720985 1.5228787452803376 0.0 0.8494850021680094 [VG]GEVN{I|L}{I|L}V;[VG]G{I|L}DN{I|L}{I|L}V;[VG]ADVN{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}NVN{I|L}{I|L}V;[VG]AVDN{I|L}{I|L}V;{[NV]|[RG]}EVN{I|L}{I|L}V;{[NV]|[RG]}{I|L}DN{I|L}{I|L}V;[DN]{I|L}VN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}DVN{I|L}{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}VDN{I|L}{I|L}V 5.415;5.08;4.9722;4.7686;4.6371;4.2747;4.2611;3.9397;3.8319;3.8182 -;-;-;-;-;-;+;-;-;- + 584 1 1.354 68691.5 1.0 12382 5019 17387 HBL1_DMSO_200M_050219_2,17403 HBL1_DMSO_200M_050219_2,17403,NVIDNLIV False True NVIDNLIV 92.404459 450.263964831829 1104514.0 17387.0 ENSG00000143621|ENST00000361891|ILF2 2.86148993174235 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17404 92.418 800.0 264970.0 25 0 83957.0 + + 8545 VFPDDMPTL 9 108 1033.4824245830632 1032.4751481164633 1 1034.483569324017 MULTI CID FTMS 0 0 0 17387 136834.421875 0.7905036866359031 3 -0.2841720581054687 17 Unmodified _ETGPTASTGVN_ nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;ENSG00000118058|ENST00000534358|KMT2A 21.53697664764585 0.586507868110548 4 [DP]DMV{M(Oxidation (M))|F}P{[NV]|[RG]} 9 -1 + 33.14 0.0 0.0 3.2098 3.2098 63.034 0.0 0.0 0.0 4.137342758552698 7.05706546247891 4.137342758552698 0.7268250975604218 0 0.0 0.0 0.6307196863200843 0.0 [DP]DMV{M(Oxidation (M))|F}P{[NV]|[RG]};[DP]DMVET{[QV]|[N{I|L}]|[RA]|[KV]};[TP]{[QS]|[NT]}NTV{[WT]|[RM]};[DP]DM{M(Oxidation (M))|F}VP{[NV]|[RG]};[DP]D{M(Oxidation (M))|F}VMP{[NV]|[RG]};[TP]{I|L}SDDV{[WT]|[RM]};[TP][EC]QQT{[QV]|[N{I|L}]|[RA]|[KV]};[QT]D[NP]MT{[QV]|[N{I|L}]|[RA]|[KV]};[DP]D{M(Oxidation (M))|F}MVP{[NV]|[RG]};[QT]D[QT]MP{[NV]|[RG]} 3.2098;3.1394;2.116;2.0954;1.6397;1.6043;1.5845;1.5129;1.4184;1.2776 -;-;-;-;-;-;-;-;-;- 1876 1 1.354 137398.4 0.800000011920929 12383 5019 17387 HBL1_DMSO_200M_050219_2,17404 HBL1_DMSO_200M_050219_2,17404,ETGPTASTGVN False False VFPDDMPTL 92.418324 1034.48356932402 1959603.5 17387.0 nc|ENSG00000118058|Q03164-2|KMT2A;;nc|ENSG00000118058|Q03164|KMT2A;;ENSG00000118058|ENST00000534358|KMT2A 6.049261887868245 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17405 92.433 800.0 134260.0 25 0 5154.3 -1 0 108 927.4265592240226 1852.8385655148447 2 927.4244262576104 MULTI CID FTMS 0 0 0 17387 124341.5625 1.0 0 0.0 18 4 [YQ]{M(Oxidation (M))|F}[YN]QQDA{M(Oxidation (M))|F}YQV 13 -1 86.231 0.0 0.0 4.654 0.0 0.0 0.0 155.08199403382756 155.08199403382756 63.5790539730952 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.7742275032520141 [YQ]{M(Oxidation (M))|F}[YN]QQDA{M(Oxidation (M))|F}YQV 4.654 - 3704 1 1.354 73589.9 0.7900000214576721 12384 5019 17387 HBL1_DMSO_200M_050219_2,17405 HBL1_DMSO_200M_050219_2,17405, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17406 92.447 800.0 124430.0 25 0 8121.1 -1 0 100 835.4004221107537 2503.1794369324607 3 835.7354614138603 MULTI CID FTMS 0 0 0 17387 120439.515625 0.3435778100231933 2 -0.1685638427734375 19 4 {[TV]|[{I|L}S]}D{M(Oxidation (M))|F}{I|L}QCV 8 -1 56.367 0.0 0.0 2.2518 0.0 0.0 0.0 1594.702666262792 1594.702666262792 16.084167719858833 0.0 0.0 0.0 0 0.5 1.5228787452803376 1.4802046884880935 0.4247425010840047 {[TV]|[{I|L}S]}D{M(Oxidation (M))|F}{I|L}QCV 2.2518 - 3080 1 1.354 73033.6 0.6800000071525574 12385 5019 17387 HBL1_DMSO_200M_050219_2,17406 HBL1_DMSO_200M_050219_2,17406, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17408 92.452 4.1 12917000.0 25 0 1950700.0 + 7497 EGYLIPIR 8 65 480.77953309405433 959.5445132549088 2 480.7804138064384 MULTI CID FTMS 0 0 0 17407 8989462.0 0.3969390502689147 2 -0.18756103515625 1 Unmodified _EGYLIPIR_ REV__ENSG00000038274|ENST00000321757|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-2|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-3|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-4|MAT2B 34.10243960390752 0.3329570729325616 4 {[DA]|[EG]}Y{I|L}{I|L}P[R{I|L}] 8 -1 + 49.13 0.0 0.0 5.1201 5.1201 87.145 0.0 0.0 0.0 31.197887582883933 6.989700043360188 6.989700043360188 49.12971259689115 0 0.5 1.5228787452803376 0.0 0.3494850021680094 {[DA]|[EG]}Y{I|L}{I|L}P[R{I|L}] 5.1201 + + 48 + 1 1.354 46687.9 1.0 12386 5020 17407 HBL1_DMSO_200M_050219_2,17408 HBL1_DMSO_200M_050219_2,17408,EGYLIPIR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17409 92.453 10.0 5634100.0 25 0 716350.0 + 32105 RVLQNLLTI 9 57 535.3399020782176 1068.6652512232351 2 535.3403808474541 MULTI CID FTMS 0 0 0 17407 5548671.0 0.9013208731748956 1 -0.0719528198242187 2 Unmodified _RVLQNLLTI_ ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2 41.8396318013385 0.0653578398400075 4 [{I|L}T]{I|L}[WP]{I|L}{I|L}T{I|L} 9 4 + 60.34 0.0 0.0 5.6463 5.6463 80.41 0.0 0.0 0.0 6.020599913279625 16.478174818886373 6.020599913279625 6.020599913279625 0 0.5 1.5228787452803376 0.4247425010840047 0.0 [{I|L}T]{I|L}[WP]{I|L}{I|L}T{I|L};[RV]{I|L}QN{I|L}{I|L}T{I|L};[RV]{I|L}[AG]N{I|L}{I|L}T{I|L};[RV]{I|L}QGG{I|L}{I|L}T{I|L};[RV]{I|L}[AG]GG{I|L}{I|L}T{I|L};[RV]{I|L}Q[KA]{I|L}E{I|L};[RV]{I|L}[AG][KA]{I|L}E{I|L} 5.6463;5.0829;4.2213;4.2213;3.3637;2.5788;1.7171 -;+;-;-;-;-;- + 162 1 1.354 50546.4 1.0 12387 5020 17407 HBL1_DMSO_200M_050219_2,17409 HBL1_DMSO_200M_050219_2,17409,RVLQNLLTI True True RVLQNLLTI 92.452877 535.340380847454 147753552.0 17407.0 nc|ENSG00000118971|P30279-2|CCND2;;ENSG00000118971|ENST00000261254|CCND2 4.736733754475911 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17410 92.454 23.0 2966200.0 25 0 409400.0 + 1571 ALLDVFREA 9 59 517.2867500848474 1032.5589472364948 2 517.2878906130791 MULTI CID FTMS 0 0 0 17407 2470102.5 0.8957809380649396 1 -0.0719528198242187 3 Unmodified _ALLDVFREA_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 31.26834338654808 0.1333407332142048 4 [{I|L}A]{I|L}DV{M(Oxidation (M))|F} 6 3 61.911 0.0 0.0 5.9959 0.0 0.0 0.0 371.1688326471313 371.1688326471313 40.74031267727719 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.0 0.0 + [{I|L}A]{I|L}DV{M(Oxidation (M))|F} 5.9959 + + 119 + 1 1.354 56451.4 1.0 12388 5020 17407 HBL1_DMSO_200M_050219_2,17410 HBL1_DMSO_200M_050219_2,17410,ALLDVFREA False True ALLDVFREA 92.454054 517.287890613079 42520232.0 17407.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 6.851985136667888 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17411 92.455 43.0 1525000.0 25 0 275220.0 + 44748 YPLERGFIYV 10 62 628.8372056889573 1255.6598584447145 2 628.8378173708916 MULTI CID FTMS 0 0 0 17407 1131659.375 1.0 0 0.0 4 Unmodified _YPLERGFIYV_ ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF 38.61474834105838 0.1721950110283317 4 YP{I|L}E 4 6 43.193 0.0 0.0 3.4398 0.0 0.0 0.0 750.3986910455686 750.3986910455686 8.46787486224656 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + YP{I|L}E 3.4398 + + 64 + 1 1.354 55896.4 1.0 12389 5020 17407 HBL1_DMSO_200M_050219_2,17411 HBL1_DMSO_200M_050219_2,17411,YPLERGFIYV False True YPLERGFIYV 92.455269 628.837817370892 40223364.0 17407.0 ENST00000293880.9_1_11:57098199-57100416:-|nuORF;;ENSG00000149136|ENST00000278412|SSRP1 7.2669399579366045 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17412 92.457 45.0 1270700.0 25 0 162770.0 + 870 AEVDVNQKLLL 11 80 621.3575757175456 1240.7005985018911 2 621.3589355349541 MULTI CID FTMS 0 0 0 17407 1104197.875 0.0184701500089524 6 -0.6337509155273438 5 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 26.020703789607367 0.4812285719068541 4 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L} 11 -1 + 66.178 0.0 0.0 5.3339 5.3339 79.445 0.0 0.0 0.0 9.890046156985376 15.070623213458036 9.890046156985376 6.386223210290865 0 1.924742501084005 1.3979400086720375 0.0 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}AD{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}AVDW{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}VEVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}[{I|L}A]{I|L}VDW{I|L}{I|L};{[VA]|[{I|L}G]}EDVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}AVDAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}AD{I|L}{I|L};{[DA]|[EG]}VEVA{I|L}{I|L}AD{I|L}{I|L} 5.3339;4.8192;4.607;4.5368;4.4456;4.3644;4.1208;4.0923;4.022;3.9309 -;-;-;-;-;-;-;-;-;- 2213 1 1.354 47828.6 1.0 12390 5020 17407 HBL1_DMSO_200M_050219_2,17412 HBL1_DMSO_200M_050219_2,17412,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17413 92.458 70.0 678310.0 25 0 146410.0 26899 PDLDKTKIFL 10 53 595.3450688998811 1188.675584866562 2 595.3452636599541 MULTI CID FTMS 0 0 0 17407 732525.4375 0.7916916200730898 1 -0.0719528198242187 6 Unmodified _PDLDKTKIFL_ ENSG00000139826|ENST00000375898|ABHD13 26.268140514670165 0.3785003716575977 4 {M(Oxidation (M))|F}K{I|L}{M(Oxidation (M))|F}{I|L} 5 6 46.766 0.0 0.0 3.9343 0.0 0.0 522.2692738263687 0.0 522.2692738263687 0.0 32.16190326687972 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 {M(Oxidation (M))|F}K{I|L}{M(Oxidation (M))|F}{I|L} 3.9343 - 61 1 1.354 41894.9 1.0 12391 5020 17407 HBL1_DMSO_200M_050219_2,17413 HBL1_DMSO_200M_050219_2,17413,PDLDKTKIFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17414 92.46 79.0 771660.0 25 0 67820.0 + 31086 RLLDYVVNI 9 73 552.8250988908625 1103.6356448485249 2 552.8246337771416 MULTI CID FTMS 0 0 0 17407 505859.5625 0.8605839156061884 -1 0.0966110229492187 7 Unmodified _RLLDYVVNI_ ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2 23.78978130925829 0.2284941198415988 4 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVN{I|L} 9 2 + 48.663 0.0 0.0 4.4093 4.4093 76.985 0.0 0.0 0.0 1.5347590481702156 32.46462170693448 1.5347590481702156 7.6931168656760605 0 0.7742275032520141 0.0 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVN{I|L};{[NV]|[RG]}[RK]YVVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVGG{I|L};{[NV]|[RG]}[RK]YVVGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YRR{I|L} 4.4093;3.7122;3.5749;2.8779;2.0112 -;-;-;-;- 235 1 1.354 55845.7 1.0 12392 5020 17407 HBL1_DMSO_200M_050219_2,17414 HBL1_DMSO_200M_050219_2,17414,RLLDYVVNI False True RLLDYVVNI 92.459992 552.824633777142 4903926.0 17407.0 ENSG00000197256|ENST00000586659|KANK2;;nc|ENSG00000197256|Q63ZY3-3|KANK2;;nc|ENSG00000197256|Q63ZY3-2|KANK2 6.527126630147298 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17415 92.463 140.0 436800.0 25 0 65678.0 + 35834 SVLDDNKLLTL 11 78 615.8508973479269 1229.6872417626537 2 615.8513061404228 MULTI CID FTMS 0 0 0 17407 374563.53125 0.0612439005616805 3 -0.3100967407226562 8 Unmodified _SVLDDNKLLTL_ ENSG00000197102|ENST00000360184|DYNC1H1 53.31671820480216 0.0992620867501809 4 [VS]{I|L}DV{[QG]|[NA]}{I|L}T{I|L}[VS] 12 5 + 58.729 0.0 0.0 4.7759 4.7759 76.728 0.0 0.0 0.0 9.872792557258135 5.061668675368622 5.061668675368622 6.020599913279625 0 1.0924778212679485 2.0 0.6549471895720984 0.6694451763165201 [VS]{I|L}DV{[QG]|[NA]}{I|L}T{I|L}[VS];[VS]{I|L}DV{[QG]|[NA]}T{I|L}{I|L}[VS];{NN|[MP]|[D{I|L}]|[EV]}[DN]K{I|L}{I|L}T{I|L}[VS];[{I|L}T][W{I|L}]{[QG]|[NA]}{I|L}T{I|L}W;{NN|[MP]|[D{I|L}]|[EV]}[DN]K{I|L}T{I|L}{I|L}[VS];{NN|[MP]|[D{I|L}]|[EV]}[DN]K{I|L}[VS]{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DN]K{I|L}{I|L}[VS]T{I|L};[{I|L}T][W{I|L}]{[QG]|[NA]}T{I|L}{I|L}W;[{I|L}T][W{I|L}]{[QG]|[NA]}{I|L}WT{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DN]K{I|L}TVVT{I|L} 4.7759;4.2863;3.9731;3.6283;3.4835;3.2057;3.1662;3.1387;2.8215;2.6766 -;-;-;-;-;-;-;-;-;- 259 1 1.354 50696.9 1.0 12393 5020 17407 HBL1_DMSO_200M_050219_2,17415 HBL1_DMSO_200M_050219_2,17415,SVLDDNKLLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17416 92.466 170.0 674890.0 25 0 94275.0 + 40516 VIVELIYKV 9 103 538.341899913485 1074.66924689377 2 538.3414184451103 MULTI CID FTMS 0 0 0 17407 323329.09375 0.0863954318885222 -3 0.297760009765625 9 Unmodified _VIVELIYKV_ ENSG00000129083|ENST00000439561|COPB1 40.72490554402381 0.0714771638475563 4 V{I|L}VE{I|L}{I|L}YKV 9 0 + 98.806 0.0 0.0 9.1941 9.1941 99.256 0.0 0.0 0.0 58.215659644238926 11.4226874481638 11.4226874481638 98.80574800618535 0 1.5044321917401078 2.0 0.4247425010840047 0.2059771852360797 + + V{I|L}VE{I|L}{I|L}YKV 9.1941 + + 632 + 1 1.354 92280.4 1.0 12394 5020 17407 HBL1_DMSO_200M_050219_2,17416 HBL1_DMSO_200M_050219_2,17416,VIVELIYKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17417 92.468 106.0 483360.0 25 0 25683.0 + 10232 FQMPTPIQM 9 84 546.7639194455434 1091.5132859578866 2 546.7646972537041 MULTI CID FTMS 0 0 0 17407 282881.375 0.8440608482172787 -1 0.0966110229492187 10 Unmodified _FQMPTPIQM_ ENSG00000278053|ENST00000617633|DDX52 36.12702656103203 0.0967173616627612 4 [{I|L}P]Q{[YC]|[HE]}P 6 8 25.876 0.0 0.0 2.3706 0.0 0.0 0.0 387.1731119679054 387.1731119679054 10.13051521653523 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.4247425010840047 0.0 [{I|L}P]Q{[YC]|[HE]}P 2.3706 - 217 1 1.354 49032.8 1.0 12395 5020 17407 HBL1_DMSO_200M_050219_2,17417 HBL1_DMSO_200M_050219_2,17417,FQMPTPIQM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17418 92.473 217.0 397630.0 25 0 63182.0 16055 ITLEHLQLL 9 117 540.3267568600942 1078.6389607869885 2 540.3273803591728 MULTI CID FTMS 0 0 0 17407 203028.234375 0.5140443724122838 -2 0.2027435302734375 11 Unmodified _ITLEHLQLL_ ENSG00000173064|ENST00000682272|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4 27.628801355627647 0.1796483985696185 4 [{I|L}T]H{I|L}E{I|L} 6 4 27.273 0.0 0.0 2.5284 0.0 0.0 0.0 369.2175490040383 369.2175490040383 0.5166096705585943 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.2614393726401687 0.0 [{I|L}T]H{I|L}E{I|L} 2.5284 - 646 1 1.354 71373.7 1.0 12396 5020 17407 HBL1_DMSO_200M_050219_2,17418 HBL1_DMSO_200M_050219_2,17418,ITLEHLQLL False True ELLHTLQLL 92.472525 540.3276 3505262.0 17407.0 ENSG00000141577|ENST00000450824|CEP131;;nc|ENSG00000141577|Q9UPN4|CEP131;;nc|ENSG00000141577|Q9UPN4-3|CEP131 1.753609950343768 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17419 92.475 137.0 414940.0 25 0 55111.0 + 22243 LPRIFTSI 8 84 473.789514499717 945.564476066234 2 473.7894164919853 MULTI CID FTMS 0 0 0 17407 174971.71875 0.8108944184574338 -3 0.297760009765625 12 Unmodified _LPRIFTSI_ ENSG00000167085|ENST00000300408|PHB1;ENST00000355202.8_1_19:38187835-38188303:-|nuORF;ENST00000393345.8_1_17:47486298-47490626:-|nuORF;nc|ENSG00000167085|P35232-2|PHB1 54.773552608820026 0.1167943196628344 4 ES{I|L} 3 6 36.471 0.0 0.0 3.8571 0.0 0.0 598.3983395374523 0.0 598.3983395374523 0.0 20.27310937020445 0.0 0.0 0 0.8494850021680094 0.0 0.805462187404089 0.0 ES{I|L} 3.8571 - 75 1 1.354 49629.0 1.0 12397 5020 17407 HBL1_DMSO_200M_050219_2,17419 HBL1_DMSO_200M_050219_2,17419,LPRIFTSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17420 92.483 432.0 251870.0 25 0 56978.0 + 27647 PLGSPLLL 8 112 405.2602548229989 808.5059567127978 2 405.2601806521416 MULTI CID FTMS 0 0 0 17407 185696.234375 0.93483329105386 2 -0.18756103515625 13 Unmodified _PLGSPLLL_ ENST00000537708.1_1_12:6669555-6669804:-|nuORF 52.69307289633392 0.1265801145616722 4 [{I|L}P][SG]P{I|L}{I|L}{I|L} 8 0 + 43.338 0.0 0.0 5.3602 5.3602 80.678 0.0 0.0 0.0 11.73902187720806 19.69273760456403 11.73902187720806 7.474250108400469 0 0.7429928190999391 2.0 1.0044321917401078 0.0 + + [{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L};{[SA]|[TG]}[{I|L}P]VP{I|L}{I|L} 5.3602;4.4358;1.4597 +;-;- + 171 1 1.354 90060.8 1.0 12398 5020 17407 HBL1_DMSO_200M_050219_2,17420 HBL1_DMSO_200M_050219_2,17420,PLGSPLLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17421 92.486 171.0 383340.0 25 0 37032.0 + 9887 FPFPTPPSV 9 97 494.7607277296627 987.5069025261254 2 494.7605468630791 MULTI CID FTMS 0 0 0 17407 158490.5625 0.4086405222143834 -4 0.433380126953125 14 Unmodified _FPFPTPPSV_ ENSG00000150990|ENST00000308736|DHX37 46.92087301778293 0.0471210510596396 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TP{M(Oxidation (M))|F} 5 5 41.541 0.0 0.0 4.2066 0.0 0.0 0.0 395.1930528242687 395.1930528242687 14.11283831006606 0.0 0.0 0.0 0 0.5 2.0 1.055462187404089 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TP{M(Oxidation (M))|F} 4.2066 - 329 1 1.354 53622.5 1.0 12399 5020 17407 HBL1_DMSO_200M_050219_2,17421 HBL1_DMSO_200M_050219_2,17421,FPFPTPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17422 92.491 272.0 229560.0 25 0 24975.0 + 9086 FFFTARTSF 9 99 562.283067094463 1122.551581255726 2 562.2855712771416 MULTI CID FTMS 0 0 0 17407 125494.5234375 0.1665475049381665 5 -0.5414505004882812 15 Unmodified _FFFTARTSF_ ENSG00000153179|ENST00000542104|RASSF3;ENST00000540088.1_1_12:65004304-65005331:+|nuORF;nc|ENSG00000153179|Q86WH2-2|RASSF3 10.799506525563784 0.5443532743200366 4 V 1 9 13.495 0.0 0.0 1.2022 0.0 0.0 1005.471928401037 0.0 1005.471928401037 0.0 0.7306401783911909 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2022 - 163 + 1 1.354 53083.9 1.0 12400 5020 17407 HBL1_DMSO_200M_050219_2,17422 HBL1_DMSO_200M_050219_2,17422,FFFTARTSF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17423 92.505 800.0 167500.0 25 0 13796.0 -1 0 124 573.2958660835639 572.2885896169638 1 573.2982055544853 MULTI CID FTMS 0 0 0 17407 114978.0 1.0 0 0.0 16 4 [Y{I|L}]{M(Oxidation (M))|F} 3 -1 15.686 0.0 0.0 2.741 0.0 0.0 0.0 146.04897104690443 146.04897104690443 3.212112250009655 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [Y{I|L}]{M(Oxidation (M))|F} 2.741 - 59 1 1.354 104270.8 0.6600000262260437 12401 5020 17407 HBL1_DMSO_200M_050219_2,17423 HBL1_DMSO_200M_050219_2,17423, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17424 92.519 800.0 193080.0 25 0 21504.0 + -1 YPQDYQFYI 9 149 618.782831171164 1235.551109409128 2 618.7827636599541 MULTI CID FTMS 0 0 0 17407 86244.96875 0.9328398120049124 1 -0.0719528198242187 17 Oxidation (M) _FYIENM(Oxidation (M))QYL_ nc|ENSG00000124783|P43307-2|SSR1;ENSG00000124783|ENST00000244763|SSR1 38.15118350030904 0.0856056900103839 4 [AG]PDYQY{M(Oxidation (M))|F}Y{I|L} 10 -1 + 45.085 0.0 0.0 3.649 3.649 66.161 0.0 0.0 0.0 3.979400086720375 8.314695960392129 3.979400086720375 1.7609125905568137 0 0.5682503180159344 1.0457574905606752 0.6307196863200843 0.3252574989159953 [AG]PDYQY{M(Oxidation (M))|F}Y{I|L};[AG]PDYYQ{M(Oxidation (M))|F}Y{I|L};[QP]DYQY{M(Oxidation (M))|F}Y{I|L};[AG]PDYQ{M(Oxidation (M))|F}YY{I|L};[QP]DYYQ{M(Oxidation (M))|F}Y{I|L};[QP]DYQ{M(Oxidation (M))|F}YY{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EEY{M(Oxidation (M))|F}NQ{I|L};[AG]PDY[AG]Y{M(Oxidation (M))|F}Y{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}MYEEY{I|L};[QP]DY[AG]Y{M(Oxidation (M))|F}Y{I|L} 3.649;3.5065;3.3269;3.2468;3.1844;2.9247;2.8032;2.644;2.6411;2.5817 -;-;-;-;-;-;-;-;-;- 1552 1 1.354 116529.7 0.6200000047683716 12402 5020 17407 HBL1_DMSO_200M_050219_2,17424 HBL1_DMSO_200M_050219_2,17424,FYIENMQYL False False YPQDYQFYI 92.518994 618.782763659954 1959015.0 17407.0 nc|ENSG00000124783|P43307-2|SSR1;;ENSG00000124783|ENST00000244763|SSR1 3.814793109893799 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17426 92.524 31.0 2200400.0 25 0 348770.0 + 3183 AVVLPLARI 9 63 476.32115162604936 950.6277503188988 2 476.3212463259697 MULTI CID FTMS 0 0 0 17425 1698278.875 0.9980725024975264 -1 0.0719528198242187 1 Unmodified _AVVLPLARI_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 50.855029805455786 0.0384952370514206 4 {[VA]|[{I|L}G]}V{I|L}{I|L}[RD]{I|L} 8 2 58.566 0.0 0.0 6.1608 0.0 0.0 0.0 68.05138574771718 68.05138574771718 51.57673934921631 0.0 0.0 0.0 0 1.2887254899964358 1.6989700043360187 0.3807196863200844 0.4247425010840047 {[VA]|[{I|L}G]}V{I|L}{I|L}[RD]{I|L} 6.1608 - 208 + 1 1.354 58462.9 1.0 12403 5021 17425 HBL1_DMSO_200M_050219_2,17426 HBL1_DMSO_200M_050219_2,17426,AVVLPLARI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17427 92.528 218.0 427890.0 25 0 70862.0 + 43934 YGIPAIVKL 9 99 487.3068622324066 972.5991715316133 2 487.8071472048759 MULTI CID FTMS 0 0 0 17425 206288.0 0.3798578465498171 -4 0.3697128295898437 2 Unmodified _YGIPAIVKL_ ENSG00000173801|ENST00000393931|JUP;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 26.88365393820708 0.1891292719743517 4 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}EVK{I|L} 8 5 + 30.143 0.0 0.0 3.0992 3.0992 63.575 0.0 0.0 0.0 -3.521825181113627 0.9243259168159312 -3.521825181113627 1.2244104464539127 0 0.0 0.0 0.0 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}EVK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}P[SG];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}E{I|L}VK{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}E[K{I|L}]V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}E{I|L}[K{I|L}]V 3.0992;2.9733;2.855;1.403;1.1588 -;-;-;-;- 270 + 1 1.354 74183.3 1.0 12404 5021 17425 HBL1_DMSO_200M_050219_2,17427 HBL1_DMSO_200M_050219_2,17427,YGIPAIVKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17428 92.53 106.0 592880.0 25 0 77861.0 + 25910 NLLAHFINA 9 106 506.78289951387546 1011.551246094551 2 506.7828552126884 MULTI CID FTMS 0 0 0 17425 304392.78125 1.0 0 0.0 3 Unmodified _NLLAHFINA_ ENSG00000137409|ENST00000373627|MTCH1;nc|ENSG00000137409|Q9NZJ7-2|MTCH1;nc|ENSG00000137409|Q9NZJ7-3|MTCH1 26.88365393820708 0.1891292719743517 4 [{I|L}A]H{M(Oxidation (M))|F}{I|L}N 6 3 34.508 0.0 0.0 3.4114 0.0 0.0 0.0 313.15743210712805 313.15743210712805 7.666798101327856 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.3494850021680094 + [{I|L}A]H{M(Oxidation (M))|F}{I|L}N 3.4114 + + 488 1 1.354 54928.0 1.0 12405 5021 17425 HBL1_DMSO_200M_050219_2,17428 HBL1_DMSO_200M_050219_2,17428,NLLAHFINA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17429 92.536 321.0 184010.0 25 0 36507.0 + -1 RIAKMKRRHFI 11 81 491.2993784148373 1470.876305844712 3 491.2989379763603 MULTI CID FTMS 0 0 0 17425 192541.109375 0.4772706921224855 -1 0.0719528198242187 4 Oxidation (M) _RIAKM(Oxidation (M))KRRHFI_ REV__ENSG00000205442|ENST00000543880|IZUMO3 0.5059551277355931 0.8727608062196215 4 {I|L} 1 -1 12.764 0.0 0.0 0.8678 0.0 0.0 1339.7811500603352 0.0 1339.7811500603352 0.0 6.310559648168059 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.8678 + + 49 + 1 1.354 59124.6 1.0 12406 5021 17425 HBL1_DMSO_200M_050219_2,17429 HBL1_DMSO_200M_050219_2,17429,RIAKMKRRHFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17430 92.55 800.0 205930.0 25 0 16169.0 + -1 PMACFMSLPE 10 173 607.7467251627224 1213.4788973922448 2 607.7473022341728 MULTI CID FTMS 0 0 0 17425 152693.0625 1.0 0 0.0 5 Carbamidomethyl (C),2 Oxidation (M) _PM(Oxidation (M))AC(Carbamidomethyl (C))FM(Oxidation (M))SLPE_ REV__ENSG00000175928|ENST00000319331|LRRN1 14.838274106304384 0.5985701837916485 4 [EP]{I|L} 3 -1 26.681 0.0 0.0 2.1987 0.0 0.0 0.0 871.276169383974 871.276169383974 5.328176037592499 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.25 0.0 [EP]{I|L} 2.1987 - 758 1 1.354 121586.7 0.75 12407 5021 17425 HBL1_DMSO_200M_050219_2,17430 HBL1_DMSO_200M_050219_2,17430,PMACFMSLPE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17431 92.564 800.0 155770.0 25 0 22602.0 + -1 YLIDEPSAYL 10 143 592.2987284752573 591.2914520086573 1 592.2986938357353 MULTI CID FTMS 0 0 0 17425 125171.6015625 0.8481725922237512 -1 0.0719528198242187 6 ENST00000510321.1_1_4:146044244-146044510:+|nuORF;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;ENST00000515678.5_1_4:146042303-146044753:+|nuORF;ENSG00000164163|ENST00000296577|ABCE1 4 [Y{I|L}]A[EP] 5 -1 + 23.925 0.0 0.0 4.0463 4.0463 68.407 0.0 0.0 0.0 2.2849483235551737 3.634993639681312 2.2849483235551737 2.2849483235551737 0 0.0 1.6989700043360187 0.0 0.0 [Y{I|L}]A[EP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[EP];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[EP] 4.0463;3.6599;1.7172 -;-;- 166 1 1.354 95630.5 0.6800000071525574 12408 5021 17425 HBL1_DMSO_200M_050219_2,17431 HBL1_DMSO_200M_050219_2,17431, False False YLIDEPSAYL 92.563515 592.298693835735 1253171.375 17425.0 ENST00000510321.1_1_4:146044244-146044510:+|nuORF;;ENST00000444025.1_1_7:23602199-23602811:-|nuORF;;ENST00000515678.5_1_4:146042303-146044753:+|nuORF;;ENSG00000164163|ENST00000296577|ABCE1 3.092130303382873 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17432 92.577 800.0 162650.0 25 0 11502.0 -1 MQVIEQETP 9 119 1090.5089637343954 1089.5016872677954 1 1092.523852527142 MULTI CID FTMS 0 0 0 17425 117426.390625 0.4722186214624315 -11 1.18280029296875 7 Oxidation (M) _M(Oxidation (M))QVIEQETP_ ENSG00000149182|ENST00000524782|ARFGAP2;ENST00000395449.7_1_11:47187835-47198404:-|nuORF;nc|ENSG00000149182|Q8N6H7-2|ARFGAP2;nc|ENSG00000149182|Q8N6H7-3|ARFGAP2 24.020572477871973 0.2255576514309169 4 [{I|L}P]D{[CT]|[{M(Oxidation (M))|F}G]}REQE 9 -1 + 51.661 0.0 0.0 4.7417 4.7417 69.036 0.0 0.0 0.0 1.249387366082999 9.583428324247125 1.249387366082999 1.249387366082999 0 0.3054621874040891 1.3979400086720375 0.9947026752325154 0.6139829889124311 [{I|L}P]D{[CT]|[{M(Oxidation (M))|F}G]}REQE;[EP]V{[CT]|[{M(Oxidation (M))|F}G]}REQE;[{I|L}P]Q[NS]Q{M(Oxidation (M))|F}QE;[{I|L}P][YN][TP]EQE;[{I|L}P]D{[CT]|[{M(Oxidation (M))|F}G]}RE[AG]E;{M(Oxidation (M))|F}QE[TP][{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[EP]V{[CT]|[{M(Oxidation (M))|F}G]}RE[AG]E;[{I|L}P]{M(Oxidation (M))|F}S[Q{I|L}]EQE;[{I|L}P][TP][YN]EQE;[{I|L}P]DV{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}QE 4.7417;4.627;4.2254;4.191;3.8965;3.8621;3.7818;3.7051;3.6161;3.4053 -;-;-;-;-;-;-;-;-;- 3937 1 1.354 84036.3 0.6299999952316284 12409 5021 17425 HBL1_DMSO_200M_050219_2,17432 HBL1_DMSO_200M_050219_2,17432,MQVIEQETP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17433 92.591 800.0 298140.0 25 0 36479.0 + 35852 SVLEKLQIL 9 186 521.8290137957757 1041.6434746583514 2 521.8299438357353 MULTI CID FTMS 0 0 0 17425 110713.0390625 0.4433675433086248 -1 0.0719528198242187 8 Unmodified _SVLEKLQIL_ ENSG00000152133|ENST00000674370|GPATCH11;nc|ENSG00000152133|Q8N954-2|GPATCH11;nc|ENSG00000152133|Q8N954|GPATCH11 86.33184430468982 0.0159826143231117 4 [VS]{I|L}A{I|L}Q[VS]{I|L}{I|L} 10 4 + 86.077 0.0 0.0 8.2636 8.2636 85.088 0.0 0.0 0.0 22.24610113618283 6.423354580575037 6.423354580575037 3.4199419632364823 0 1.4462890379880755 2.0 1.471047464647553 0.6549471895720985 [VS]{I|L}A{I|L}Q[VS]{I|L}{I|L};[VS]{I|L}A{I|L}Q{I|L}VS{I|L};[VS]A{I|L}{I|L}Q[VS]{I|L}{I|L};[VS]{I|L}A{I|L}[VS]Q{I|L}{I|L};[VS]A{I|L}{I|L}Q{I|L}VS{I|L};[VS]{I|L}AQ{I|L}[VS]{I|L}{I|L};[VS]A{I|L}{I|L}[VS]Q{I|L}{I|L};[VS]{I|L}EK{I|L}Q{I|L}{I|L};[VS]{I|L}AQ{I|L}{I|L}VS{I|L};[VS]{I|L}A{I|L}[AG][VS]{I|L}{I|L} 8.2636;7.9353;7.6851;7.5859;7.3568;7.233;7.0073;6.9276;6.9047;6.755 -;-;-;-;-;-;-;+;-;- + 5717 1 1.354 189394.9 0.6000000238418579 12410 5021 17425 HBL1_DMSO_200M_050219_2,17433 HBL1_DMSO_200M_050219_2,17433,SVLEKLQIL True True SVLEKLQIL 92.59121 521.829943835735 1830010.25 17425.0 nc|ENSG00000152133|Q8N954-2|GPATCH11;;ENSG00000152133|ENST00000674370|GPATCH11;;nc|ENSG00000152133|Q8N954|GPATCH11 2.70373276869456 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17434 92.605 800.0 92244.0 25 0 14295.0 + + 11169 NALTLIRL 8 122 457.7872101519164 913.5598673706328 2 457.7868530154228 MULTI CID FTMS 0 0 0 17425 101143.1171875 1.0 0 0.0 9 Unmodified _GELLLTRI_ ENST00000521621.5_1_5:178047568-178050263:-|nuORF 30.63653989081413 0.3996269429323407 4 {[DA]|[EG]}{I|L}T{I|L}{I|L}R{I|L} 8 -1 + 64.448 0.0 0.0 7.0546 7.0546 80.324 0.0 0.0 0.0 50.46388461952553 11.313506577119623 11.313506577119623 2.3721186938815464 0 1.0114393726401687 1.6989700043360187 0.0 0.0 {[DA]|[EG]}{I|L}T{I|L}{I|L}R{I|L};{[DA]|[EG]}{I|L}{I|L}T{I|L}R{I|L} 7.0546;6.795 -;- 179 + 1 1.354 60553.7 0.5 12411 5021 17425 HBL1_DMSO_200M_050219_2,17434 HBL1_DMSO_200M_050219_2,17434,GELLLTRI False False NALTLIRL 92.605027 457.786853015423 0.0 17425.0 ENST00000521621.5_1_5:178047568-178050263:-|nuORF -0.4701586297402779 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17435 92.61 183.0 365310.0 25 0 20087.0 -1 KVLDIMPLTL 10 105 579.8418157046 1157.669078476 2 579.8444091677666 MULTI CID FTMS 0 0 0 17425 100030.375 0.1030548347306008 -2 0.1685638427734375 10 Oxidation (M) _KVLDIM(Oxidation (M))PLTL_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 38.61474834105838 0.1721950110283317 4 [{I|L}P]T{I|L}[YQ][{I|L}P]T{I|L} 10 -1 + 53.249 0.0 0.0 4.5997 4.5997 71.115 0.0 0.0 0.0 2.730012720637376 16.532125137753432 2.730012720637376 2.730012720637376 0 0.8807196863200843 1.6989700043360187 0.3807196863200844 0.0 [{I|L}P]T{I|L}[YQ][{I|L}P]T{I|L};[{I|L}T]P{I|L}[YQ][{I|L}P]T{I|L};[{I|L}P]T{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}HHT{I|L};[{I|L}P]T{I|L}{M(Oxidation (M))|F}[{I|L}V]AAT{I|L};[{I|L}P]T[YQ]{I|L}[{I|L}P]T{I|L};[{I|L}T]P{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}HHT{I|L};[{I|L}T]P{I|L}{M(Oxidation (M))|F}[{I|L}V]AAT{I|L};[{I|L}T]P[YQ]{I|L}[{I|L}P]T{I|L};[{I|L}P]T{I|L}[YQ][{I|L}T]P{I|L};[{I|L}T][Q{I|L}]{I|L}{M(Oxidation (M))|F}[{I|L}P]T{I|L} 4.5997;4.3639;4.2708;4.2351;4.1876;4.035;3.9993;3.9517;3.9078;3.7643 -;-;-;-;-;-;-;-;-;- 625 1 1.354 55885.6 1.0 12412 5021 17425 HBL1_DMSO_200M_050219_2,17435 HBL1_DMSO_200M_050219_2,17435,KVLDIMPLTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17436 92.621 607.0 235700.0 25 0 20382.0 + 17169 KLIPQLPTL 9 149 511.8339557675641 1021.6533586019282 2 511.8344604372978 MULTI CID FTMS 0 0 0 17425 97806.78125 0.8024787016622537 -1 0.0719528198242187 11 Unmodified _KLIPQLPTL_ ENSG00000025039|ENST00000369415|RRAGD;ENSG00000116954|ENST00000373001|RRAGC;ENST00000496778.1_1_1:39317285-39318153:-|nuORF;nc|ENSG00000025039|Q9NQL2-2|RRAGD 65.23502041540118 0.0231836506122253 4 [QP]{I|L}K{I|L}{I|L} 6 5 39.932 0.0 0.0 3.9086 0.0 0.0 0.0 326.17051602114617 326.17051602114617 14.485964624944906 0.0 0.0 0.0 0 0.8807196863200843 0.5376020021010439 0.0 0.5114393726401688 [QP]{I|L}K{I|L}{I|L} 3.9086 - 1311 1 1.354 114355.0 1.0 12413 5021 17425 HBL1_DMSO_200M_050219_2,17436 HBL1_DMSO_200M_050219_2,17436,KLIPQLPTL True True KLIPQLPTL 92.620654 511.834460437298 2873192.75 17425.0 ENST00000496778.1_1_1:39317285-39318153:-|nuORF;;ENSG00000025039|ENST00000369415|RRAGD;;nc|ENSG00000025039|Q9NQL2-2|RRAGD;;ENSG00000116954|ENST00000373001|RRAGC 4.893468856811523 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17437 92.634 800.0 221170.0 25 0 17539.0 -1 0 190 310.6606850079625 619.306817082725 2 310.6605712771416 MULTI CID FTMS 0 0 0 17425 98482.5625 1.0 0 0.0 12 4 H[YK] 3 -1 5.6864 0.0 0.0 0.91818 0.0 0.0 173.08442885566564 0.0 173.08442885566564 0.0 -2.80848766326997 -2.80848766326997 0.0 0 0.0 0.0 0.0 0.0 H[YK] 0.91818 - 27 1 1.354 144302.9 0.3899999856948852 12414 5021 17425 HBL1_DMSO_200M_050219_2,17437 HBL1_DMSO_200M_050219_2,17437, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17439 92.639 4.3 10481000.0 25 0 1821800.0 + 24792 MPIKINLI 8 74 471.2962935842053 940.5780342352108 2 471.2968932986259 MULTI CID FTMS 0 0 0 17438 11625228.0 0.4564649004419514 3 -0.3538894653320312 1 Unmodified _MPIKINLI_ ENSG00000134001|ENST00000256383|EIF2S1 26.34127834903884 0.4900704351052977 4 MP{I|L} 3 5 43.232 0.0 0.0 4.5963 0.0 0.0 0.0 596.3780611627561 596.3780611627561 2.769250191953674 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 + MP{I|L} 4.5963 + + 127 + 1 1.364 44781.3 1.0 12415 5022 17438 HBL1_DMSO_200M_050219_2,17439 HBL1_DMSO_200M_050219_2,17439,MPIKINLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17440 92.64 29.0 1504900.0 25 0 143280.0 + 29291 QIFNGTFVKL 10 69 583.8321631749548 1165.6497734167094 2 583.8325683474541 MULTI CID FTMS 0 0 0 17438 1358870.0 0.0881972655972379 3 -0.3538894653320312 2 Unmodified _QIFNGTFVKL_ ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF 19.361941925380144 0.5226674314761524 4 [Q{I|L}]{M(Oxidation (M))|F}N 4 6 29.543 0.0 0.0 2.5344 0.0 0.0 0.0 660.373598869632 660.373598869632 16.470748756446604 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 + [Q{I|L}]{M(Oxidation (M))|F}N 2.5344 + + 34 + 1 1.364 36802.1 1.0 12416 5022 17438 HBL1_DMSO_200M_050219_2,17440 HBL1_DMSO_200M_050219_2,17440,QIFNGTFVKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17441 92.642 56.0 1585600.0 25 0 241930.0 + 11737 GLIEILKKV 9 109 506.84210674645846 1011.6696605597168 2 506.8420593142509 MULTI CID FTMS 0 0 0 17438 1021571.3125 0.3266342482557142 -1 0.1156082153320312 3 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 62.57269311338072 0.0246576765497938 4 VA{I|L}E{I|L}{I|L}KKV 9 2 + 102.43 0.0 0.0 10.125 10.125 99.751 0.0 0.0 0.0 72.49867955225724 11.42667503568731 11.42667503568731 101.46307449736506 0 1.9291746928241125 2.0 0.4247425010840047 0.0 VA{I|L}E{I|L}{I|L}KKV;[KA]R[KQ]{I|L}[R{I|L}] 10.125;0.095821 -;- 545 + 1 1.364 70642.7 1.0 12417 5022 17438 HBL1_DMSO_200M_050219_2,17441 HBL1_DMSO_200M_050219_2,17441,GLIEILKKV True True GLIEILKKV 92.641843 506.842059314251 137365960.0 17438.0 ENSG00000105185|ENST00000590247|PDCD5 5.97816260655721 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17442 92.643 60.0 1105900.0 25 0 239490.0 + 11739 GLIEILKKV 9 79 338.23059400281863 1011.669952608656 3 338.2302429080009 MULTI CID FTMS 0 0 0 17438 914831.3125 0.3314602001410505 -2 0.18756103515625 4 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 29.081581746732265 0.1611639662936252 4 {[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KKV 9 0 + 67.643 0.0 0.0 6.6862 6.6862 93.799 0.0 0.0 0.0 34.92229802933785 8.416375079047498 8.416375079047498 67.64268234850924 0 0.3252574989159953 2.0 0.4247425010840047 0.0 + + {[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KKV 6.6862 + + 274 + 1 1.364 58371.2 1.0 12418 5022 17438 HBL1_DMSO_200M_050219_2,17442 HBL1_DMSO_200M_050219_2,17442,GLIEILKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17443 92.645 82.0 607530.0 25 0 147450.0 + 7429 EGLRLNLL 8 75 464.2848986892532 926.5552444453064 2 464.2851440310478 MULTI CID FTMS 0 0 0 17438 664075.0625 0.6119954013375518 -1 0.1156082153320312 5 Unmodified _EGLRLNLL_ ENST00000526748.1_1_14:75536435-75544319:+|nuORF 39.94969957227396 0.2351327405675156 4 {[DA]|[EG]}{I|L}R{I|L}N{I|L}{I|L} 8 0 + 66.425 0.0 0.0 7.169 7.169 90.689 0.0 0.0 0.0 15.994077049709643 14.904630595263413 14.904630595263413 9.262137858390815 0 1.6861818737241734 2.0 0.0 0.0 + + {[DA]|[EG]}{I|L}R{I|L}N{I|L}{I|L};{[DA]|[EG]}{I|L}R{I|L}GG{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}R{I|L}AD{I|L}{I|L};[KA]V[TP]W{I|L}{I|L};[KA]QQ{I|L}N{I|L}{I|L};[KA]QQ{I|L}GG{I|L}{I|L} 7.169;6.1694;5.4428;2.885;2.3701;1.3705 +;-;-;-;-;- + 258 1 1.364 44574.3 1.0 12419 5022 17438 HBL1_DMSO_200M_050219_2,17443 HBL1_DMSO_200M_050219_2,17443,EGLRLNLL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17444 92.647 56.0 800180.0 25 0 114350.0 + 7760 ELFFLLYL 8 72 529.3001695460804 1056.585786158961 2 529.3005859255791 MULTI CID FTMS 0 0 0 17438 545075.625 0.5003241903359268 6 -0.6966552734375 6 Unmodified _ELFFLLYL_ ENST00000295958.9_2_4:39553614-39553689:-|nuORF 19.438996006549623 0.6237395211498085 4 N{I|L}V{I|L}Y{I|L} 6 4 33.148 0.0 0.0 3.1373 0.0 0.0 323.14976699043126 0.0 323.14976699043126 0.0 4.3880209247048185 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 N{I|L}V{I|L}Y{I|L} 3.1373 - 337 1 1.364 44900.3 1.0 12420 5022 17438 HBL1_DMSO_200M_050219_2,17444 HBL1_DMSO_200M_050219_2,17444,ELFFLLYL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17445 92.649 124.0 337090.0 25 0 51153.0 39856 VFHQIHGKSCE 11 69 642.8087684753095 1283.602984017419 2 642.8091918826103 MULTI CID FTMS 0 0 0 17438 455333.5 0.6942678704027007 1 -0.1225357055664062 7 Unmodified _VFHQIHGKSCE_ ENST00000253513.11_1_8:39780074-39782780:+|nuORF 8.745405648335112 0.8338865417133445 4 S{I|L} 2 10 24.222 0.0 0.0 1.887 0.0 0.0 1065.4758152935892 0.0 1065.4758152935892 0.0 12.231975075880328 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 S{I|L} 1.887 - 56 + 1 1.364 36155.9 1.0 12421 5022 17438 HBL1_DMSO_200M_050219_2,17445 HBL1_DMSO_200M_050219_2,17445,VFHQIHGKSCE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17446 92.653 172.0 712610.0 25 0 55715.0 + 29343 QIVELIEKI 9 131 542.8344266508407 1083.6543003684812 2 542.8346435427666 MULTI CID FTMS 0 0 0 17438 397465.65625 0.3878452990490748 -2 0.18756103515625 8 Unmodified _QIVELIEKI_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 43.9818466556824 0.0535980856389242 4 Q{I|L}VE{I|L}{I|L}EK{I|L} 9 0 + 97.007 0.0 0.0 8.9518 8.9518 94.925 0.0 0.0 0.0 18.239087409443187 11.283889300503104 11.283889300503104 11.283889300503104 0 1.0021934810768762 2.0 0.6747425010840047 0.1923877696554315 + + Q{I|L}VE{I|L}{I|L}EK{I|L};Q{I|L}VE{I|L}{I|L}E{I|L}K;Q{I|L}VE{I|L}{I|L}{[VA]|[{I|L}G]}S{I|L};Q{I|L}VE{I|L}{I|L}{[VA]|[{I|L}G]}{I|L}S;Q{I|L}V[RN][RV]S{I|L};Q{I|L}V[RN][RV]{I|L}S;{[QN]|[E{I|L}]|[KN]}K{[HG]|PP}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[HG]|PP}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};[VS][HK]{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L} 8.9518;7.9105;7.3583;6.0635;4.1471;2.8523;2.1755;1.6502;1.0942 +;-;-;-;-;-;-;-;- + 1468 + 1 1.364 100547.0 1.0 12422 5022 17438 HBL1_DMSO_200M_050219_2,17446 HBL1_DMSO_200M_050219_2,17446,QIVELIEKI True True QIVELIEKI 92.652547 542.834643542767 17571210.0 17438.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 3.356078306833903 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17447 92.656 201.0 435560.0 25 0 67839.0 + 45629 YVLPKLYVKL 10 79 412.5969949207798 1234.7691553625395 3 412.5968505740166 MULTI CID FTMS 0 0 0 17438 291177.28125 0.7702681756560756 -1 0.1156082153320312 9 Unmodified _YVLPKLYVKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 53.832793166522166 0.0576554960245129 4 [YV]{I|L}PK{I|L}YVK{I|L} 10 0 + 75.858 0.0 0.0 6.1435 6.1435 89.798 0.0 0.0 0.0 32.95284757547677 12.01667520279372 12.01667520279372 19.731975075880328 0 1.548455006504028 2.0 0.0 0.2059771852360797 + + [YV]{I|L}PK{I|L}YVK{I|L};[YV][KP]{I|L}{I|L}YVK{I|L} 6.1435;4.5454 +;- + 472 + 1 1.364 74878.2 1.0 12423 5022 17438 HBL1_DMSO_200M_050219_2,17447 HBL1_DMSO_200M_050219_2,17447,YVLPKLYVKL True True YVLPKLYVKL 92.656374 412.596850574017 5542666.375 17438.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000471178.2_1_19:35024355-35024547:-|nuORF;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 5.676603317260742 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17448 92.67 800.0 310450.0 25 0 18567.0 + 41448 VPLLVKVI 8 132 440.8151801144748 879.6158072957496 2 440.8152648806572 MULTI CID FTMS 0 0 0 17438 233041.828125 0.8222890420431186 2 -0.2495346069335937 10 Unmodified _VPLLVKVI_ ENSG00000137040|ENST00000259569|RANBP6 74.39630413441286 0.1057069479668299 4 VP{I|L}{I|L}VKV{I|L} 8 0 + 78.159 0.0 0.0 8.8856 8.8856 98.873 0.0 0.0 0.0 50.03348897257408 13.214562785677655 13.214562785677655 78.15949611828961 0 1.7249073637206092 1.3979400086720375 0.0 0.3054621874040891 + + VP{I|L}{I|L}VKV{I|L} 8.8856 + + 394 + 1 1.364 196924.2 0.7099999785423279 12424 5022 17438 HBL1_DMSO_200M_050219_2,17448 HBL1_DMSO_200M_050219_2,17448,VPLLVKVI True True VPLLVKVI 92.670191 440.815264880657 6756236.0 17438.0 ENSG00000137040|ENST00000259569|RANBP6 3.8206494649251295 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17449 92.675 255.0 225370.0 25 0 24517.0 + 26716 NYQVQFVTL 9 93 556.2928425613079 1110.5711321894155 2 556.2928954958916 MULTI CID FTMS 0 0 0 17438 214004.65625 0.5124403640671884 -2 0.18756103515625 11 Unmodified _NYQVQFVTL_ ENSG00000125484|ENST00000372146|GTF3C4 67.34385681178166 0.0221257235307089 4 [YN]QVQ{M(Oxidation (M))|F} 6 3 55.495 0.0 0.0 4.997 0.0 0.0 0.0 328.18857626204584 328.18857626204584 33.499934467764874 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 1.610924374808178 + [YN]QVQ{M(Oxidation (M))|F} 4.997 + + 465 1 1.364 53236.4 1.0 12425 5022 17438 HBL1_DMSO_200M_050219_2,17449 HBL1_DMSO_200M_050219_2,17449,NYQVQFVTL True True NYQVQFVTL 92.674934 556.292895495892 7500398.5 17438.0 ENSG00000125484|ENST00000372146|GTF3C4 7.42883825302124 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17450 92.679 224.0 428910.0 25 0 46955.0 + 12643 GVLDPRLLVGC 11 110 571.3235956347061 1140.632638336212 2 571.3236572146416 MULTI CID FTMS 0 0 0 17438 195084.859375 0.568911562344449 -2 0.18756103515625 12 Unmodified _GVLDPRLLVGC_ ENSG00000120942|ENST00000376810|UBIAD1;nc|ENSG00000120942|Q9Y5Z9-2|UBIAD1 43.9818466556824 0.1510575460884947 4 [VG]{I|L}{I|L}PRD{I|L}VC(Carbamidomethyl (C)) 10 3 + 92.626 0.0 0.0 8.1206 8.1206 81.698 0.0 0.0 0.0 18.561062652429925 7.729461316179965 7.729461316179965 1.7609125905568137 0 1.4489700043360187 2.0 0.0 0.0 [VG]{I|L}{I|L}PRD{I|L}VC(Carbamidomethyl (C));[VG]{I|L}{I|L}PVERVC(Carbamidomethyl (C));{[VA]|[{I|L}G]}V{I|L}PRD{I|L}VC(Carbamidomethyl (C));[{I|L}V]G{I|L}PRD{I|L}VC(Carbamidomethyl (C));{[VA]|[{I|L}G]}V{I|L}PVERVC(Carbamidomethyl (C));[{I|L}V]G{I|L}PVERVC(Carbamidomethyl (C));[VG]{I|L}{I|L}PVG{[CT]|[{M(Oxidation (M))|F}G]}[WP];[VG]{I|L}{I|L}PV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WP];[RP]{I|L}{I|L}VGD{I|L}VC(Carbamidomethyl (C));{[VA]|[{I|L}G]}V{I|L}PVG{[CT]|[{M(Oxidation (M))|F}G]}[WP] 8.1206;7.9662;6.4933;6.3838;6.3389;6.2294;5.1477;4.5711;3.5934;3.5204 -;-;-;-;-;-;-;-;-;- 981 1 1.364 77633.7 1.0 12426 5022 17438 HBL1_DMSO_200M_050219_2,17450 HBL1_DMSO_200M_050219_2,17450,GVLDPRLLVGC False True GVLDPRLLVGC 92.679178 571.323657214642 7354018.5 17438.0 ENSG00000120942|ENST00000376810|UBIAD1;;nc|ENSG00000120942|Q9Y5Z9-2|UBIAD1 3.771660844484965 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17451 92.682 157.0 245330.0 25 0 35846.0 + 1426 ALDPTVFCSL 10 66 533.2681443556471 1064.521735778094 2 533.2683593630791 MULTI CID FTMS 0 0 0 17438 183285.234375 0.7182225132330999 1 -0.1225357055664062 13 Unmodified _ALDPTVFCSL_ REV__ENSG00000065000|ENST00000643116|AP3D1;REV__nc|ENSG00000065000|O14617-2|AP3D1;REV__nc|ENSG00000065000|O14617-4|AP3D1;REV__nc|ENSG00000065000|O14617|AP3D1 15.847184025352805 0.5816416552707754 4 S{I|L}VD 4 -1 20.433 0.0 0.0 1.9195 0.0 0.0 315.2191977915691 332.0750826471313 647.2942804387004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S{I|L}VD 1.9195 - 70 + 1 1.364 36516.6 1.0 12427 5022 17438 HBL1_DMSO_200M_050219_2,17451 HBL1_DMSO_200M_050219_2,17451,ALDPTVFCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17452 92.686 174.0 349140.0 25 0 42025.0 + 33454 SIFGEDALANV 11 83 568.2843464225681 1134.554139911936 2 568.2852050662041 MULTI CID FTMS 0 0 0 17438 189608.640625 0.4420564641072439 -1 0.1156082153320312 14 Unmodified _SIFGEDALANV_ ENSG00000129083|ENST00000439561|COPB1 27.628801355627647 0.4434699450731472 4 {[DA]|[EG]}{M(Oxidation (M))|F}DA{I|L}S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]} 10 8 + 28.44 0.0 0.0 2.5067 2.5067 67.753 0.0 0.0 0.0 0.7133375178436552 4.97170439282371 0.7133375178436552 3.979400086720375 0 0.3054621874040891 0.0 0.8252574989159953 0.0 {[DA]|[EG]}{M(Oxidation (M))|F}DA{I|L}S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[DA]|[EG]}D{M(Oxidation (M))|F}A{I|L}S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HN]{M(Oxidation (M))|F}S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};[KG][C(Carbamidomethyl (C))C]A{I|L}S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};[DV][RD]{M(Oxidation (M))|F}S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[DA]|[EG]}{M(Oxidation (M))|F}[W{I|L}]S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[DA]|[EG]}{I|L}[W{M(Oxidation (M))|F}]S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[DA]|[EG]}{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[QG]|[NA]}{[WN]|[YH]}{M(Oxidation (M))|F}S{I|L}{[{M(Oxidation (M))|F}H]|[RQ]} 2.5067;2.1559;2.0384;1.6178;1.157;0.98614;0.94276;0.94276;0.90243;0.85734 -;-;-;-;-;-;-;-;-;- 181 1 1.364 50964.3 1.0 12428 5022 17438 HBL1_DMSO_200M_050219_2,17452 HBL1_DMSO_200M_050219_2,17452,SIFGEDALANV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17453 92.696 505.0 164290.0 25 0 33048.0 + 25676 NGIKVLLI 8 110 435.2945606477974 868.5745683623949 2 435.2947265505791 MULTI CID FTMS 0 0 0 17438 181236.3125 0.0868117694275313 3 -0.3538894653320312 15 Unmodified _NGIKVLLI_ ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF 63.562846038646086 0.116059504757595 4 [NG]{I|L}KV{I|L}{I|L}{I|L} 8 0 + 55.085 0.0 0.0 6.342 6.342 91.468 0.0 0.0 0.0 17.442741907339574 40.4805575141165 17.442741907339574 30.287049245784765 0 1.035666875892183 0.958607314841775 0.0 1.4049471895720984 + + [NG]{I|L}KV{I|L}{I|L}{I|L};{I|L}{I|L}WV{I|L}{I|L}{I|L};[{I|L}V]K[NG]{I|L}{I|L}{I|L};[{I|L}V]K{I|L}[NG]{I|L}{I|L};[{I|L}V][W{I|L}]{I|L}{I|L}{I|L} 6.342;2.855;2.8109;2.062;1.1816 +;-;-;-;- + 77 1 1.364 67474.5 1.0 12429 5022 17438 HBL1_DMSO_200M_050219_2,17453 HBL1_DMSO_200M_050219_2,17453,NGIKVLLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17454 92.71 800.0 129630.0 25 0 8514.2 + 33338 SFYSGLTPTEF 11 120 624.792429741391 1247.5703065495818 2 624.7934448122978 MULTI CID FTMS 0 0 0 17438 176566.3125 1.0 0 0.0 16 Unmodified _SFYSGLTPTEF_ ENSG00000148606|ENST00000372371|POLR3A 96.11092074494114 0.0004512120432046 4 [TP]ET[EP]T 7 8 44.472 0.0 0.0 3.5647 0.0 0.0 0.0 489.1972346103818 489.1972346103818 15.425835976195325 0.0 0.0 0.0 0 1.0 1.154901959985743 2.0994850021680094 0.0 [TP]ET[EP]T 3.5647 - 2149 1 1.364 79975.0 0.6299999952316284 12430 5022 17438 HBL1_DMSO_200M_050219_2,17454 HBL1_DMSO_200M_050219_2,17454,SFYSGLTPTEF True True SFYSGLTPTEF 92.709589 624.793444812298 1467698.25 17438.0 ENSG00000148606|ENST00000372371|POLR3A 7.797418117523193 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17455 92.714 254.0 358220.0 25 0 33539.0 + 3086 AVNPIIYSF 9 110 512.2792297186097 1022.5439065040194 2 512.2788574099541 MULTI CID FTMS 0 0 0 17438 145755.828125 0.0275367961666156 -6 0.620941162109375 17 Unmodified _AVNPIIYSF_ ENSG00000125910|ENST00000246115|S1PR4 34.10243960390752 0.1078313939113124 4 [VP]NA{I|L}Y 6 5 41.986 0.0 0.0 4.106 0.0 0.0 0.0 362.173059700421 362.173059700421 14.093341517258509 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.9802046884880936 [VP]NA{I|L}Y 4.106 - 542 1 1.364 77756.2 1.0 12431 5022 17438 HBL1_DMSO_200M_050219_2,17455 HBL1_DMSO_200M_050219_2,17455,AVNPIIYSF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17456 92.728 800.0 127190.0 25 0 12212.0 + 21523 LPIPESQVITI 11 133 605.3582984190366 1208.702043904873 2 605.3591186404228 MULTI CID FTMS 0 0 0 17438 129144.203125 0.3222725618075523 3 -0.3538894653320312 18 Unmodified _LPIPESQVITI_ ENSG00000130313|ENST00000252603|PGLS 31.26834338654808 0.3580123756476716 4 [{I|L}T]YY{I|L}P{I|L}{I|L}[{I|L}T] 10 7 + 47.369 0.0 0.0 3.919 3.919 78.862 0.0 0.0 0.0 10.478141242527627 7.269987279362624 7.269987279362624 10.478141242527627 0 0.5 1.3010299956639813 0.872363747448347 0.0 [{I|L}T]YY{I|L}P{I|L}{I|L}[{I|L}T];[EP]SQV{I|L}P{I|L}{I|L}[{I|L}T];[{I|L}T][PG][DG]{I|L}P{I|L}{I|L}[{I|L}T];[{I|L}P]{[SA]|[TG]}[DG]{I|L}P{I|L}{I|L}[{I|L}T];[QT][DP]V{I|L}P{I|L}{I|L}[{I|L}T];[{I|L}T]{I|L}YYP{I|L}{I|L}[{I|L}T];[{I|L}T][KC][YR]V{I|L}[{I|L}T];[{I|L}T][KC][HA]P{I|L}{I|L}[{I|L}T];[NP]{[ET]|[MV]}V{I|L}P{I|L}{I|L}[{I|L}T];{[QS]|[NT]}[EP]V{I|L}P{I|L}{I|L}[{I|L}T] 3.919;3.0521;2.9606;2.9537;2.9506;2.8145;2.7929;2.7402;2.6363;2.6179 -;-;-;-;-;-;-;-;-;- 1159 1 1.364 74543.4 0.5400000214576721 12432 5022 17438 HBL1_DMSO_200M_050219_2,17456 HBL1_DMSO_200M_050219_2,17456,LPIPESQVITI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17457 92.743 800.0 197510.0 25 0 14415.0 + 34085 FLIPIYHQV 9 144 565.3080515033486 1128.601550073497 2 565.3060790896416 MULTI CID FTMS 0 0 0 17438 126361.1015625 0.0577866773110267 5 -0.5489044189453125 19 Unmodified _SLLGDDALVQV_ nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;ENSG00000278540|ENST00000616317|ACACA 41.8396318013385 0.1840573104808743 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}YHQV 9 7 + 39.852 0.0 0.0 3.5311 3.5311 69.506 0.0 0.0 0.0 8.300551985590044 3.679767852945943 3.679767852945943 3.679767852945943 0 0.3807196863200844 0.5686362358410126 0.0 0.6747425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}YHQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}YHN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AV{M(Oxidation (M))|F}{I|L}P{I|L}{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}[TP]{M(Oxidation (M))|F}{I|L}P{I|L}{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}{I|L}[EC]{I|L}P{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{[RE]|[WV]}QQV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}YH[AG]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{[RE]|[WV]}QN{I|L};[EP]RY{I|L}P{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P{I|L}[HN]Y{I|L} 3.5311;3.205;2.7956;2.2203;2.175;2.1656;2.1173;1.8395;1.8275;1.8267 -;-;-;-;-;-;-;-;-;- 1669 + 1 1.364 121686.9 0.5199999809265137 12433 5022 17438 HBL1_DMSO_200M_050219_2,17457 HBL1_DMSO_200M_050219_2,17457,SLLGDDALVQV False True FLIPIYHQV 92.743167 565.306079089642 146917.765625 17438.0 nc|ENSG00000278540|Q13085-2|ACACA;;nc|ENSG00000278540|Q13085|ACACA;;nc|ENSG00000278540|Q13085-3|ACACA;;ENSG00000278540|ENST00000616317|ACACA 6.042423725128174 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17458 92.757 800.0 298320.0 25 0 24131.0 + 45630 YVLPKLYVKL 10 146 618.3918875876709 1234.7692222421415 2 618.3916503787041 MULTI CID FTMS 0 0 0 17438 119305.640625 0.6821516672223539 -1 0.1156082153320312 20 Unmodified _YVLPKLYVKL_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 92.65332237495696 0.0091434457392194 4 YV{I|L}PK{I|L}YVK{I|L} 10 0 + 89.212 0.0 0.0 7.225 7.225 84.0 0.0 0.0 0.0 16.678374370451664 4.180920086028422 4.180920086028422 4.180920086028422 0 2.805462187404089 1.6989700043360187 0.0 0.5554621874040891 + + YV{I|L}PK{I|L}YVK{I|L};YV{I|L}PK{I|L}YV{I|L}K;YV{I|L}{I|L}[KP]YVK{I|L};YV{I|L}{I|L}[KP]YV{I|L}K;YV{I|L}PK{I|L}Y[K{I|L}]V;{I|L}YVPK{I|L}YVK{I|L};{I|L}YVPK{I|L}YV{I|L}K;YV{I|L}{I|L}[KP]Y[K{I|L}]V;{I|L}YV{I|L}[KP]YVK{I|L};{I|L}YV{I|L}[KP]YV{I|L}K 7.225;6.8864;5.9544;5.6158;5.2695;5.2163;4.8777;3.9989;3.9457;3.6071 +;-;-;-;-;-;-;-;-;- + 1457 + 1 1.364 176541.0 0.5299999713897705 12434 5022 17438 HBL1_DMSO_200M_050219_2,17458 HBL1_DMSO_200M_050219_2,17458,YVLPKLYVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17460 92.762 14.0 4642600.0 25 0 802550.0 + 40517 VIVELIYKV 9 61 538.341899913485 1074.66924689377 2 538.3420287966728 MULTI CID FTMS 0 0 0 17459 3742432.75 1.0 0 0.0 1 Unmodified _VIVELIYKV_ ENSG00000129083|ENST00000439561|COPB1 40.72490554402381 0.0714771638475563 4 V{I|L}VE{I|L}{I|L}Y{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 90.896 0.0 0.0 8.458 8.458 98.4 0.0 0.0 0.0 53.2711470149615 4.137342758552691 4.137342758552691 90.89570963353276 0 1.5044321917401078 2.0 0.4247425010840047 0.0 + + V{I|L}VE{I|L}{I|L}Y{[QV]|[N{I|L}]|[RA]|[KV]} 8.458 + + 230 + 1 1.374 55430.5 1.0 12435 5023 17459 HBL1_DMSO_200M_050219_2,17460 HBL1_DMSO_200M_050219_2,17460,VIVELIYKV True True VIVELIYKV 92.761792 538.342028796673 113672940.0 17459.0 ENSG00000129083|ENST00000439561|COPB1 6.014801820119222 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17461 92.763 40.0 1508500.0 25 0 185050.0 + 7498 EGYLIPIR 8 70 480.77953309405433 959.5445132549088 2 480.7783386111259 MULTI CID FTMS 0 0 0 17459 694026.9375 0.0306454817243004 5 -0.5741195678710938 2 Unmodified _EGYLIPIR_ REV__ENSG00000038274|ENST00000321757|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-2|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-3|MAT2B;REV__nc|ENSG00000038274|Q9NZL9-4|MAT2B 28.486842064014134 0.4448922141344407 4 {[DA]|[EG]}Y{I|L}{I|L} 5 -1 35.713 0.0 0.0 3.7219 0.0 0.0 0.0 381.22519861392817 381.22519861392817 27.754537344402905 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 {[DA]|[EG]}Y{I|L}{I|L} 3.7219 + + 66 + 1 1.374 52058.3 1.0 12436 5023 17459 HBL1_DMSO_200M_050219_2,17461 HBL1_DMSO_200M_050219_2,17461,EGYLIPIR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17462 92.765 87.0 821510.0 25 0 105060.0 + 32106 RVLQNLLTI 9 100 535.3399020782176 1068.6652512232351 2 535.3408080935478 MULTI CID FTMS 0 0 0 17459 444026.84375 0.0721273008476882 4 -0.4263687133789062 3 Unmodified _RVLQNLLTI_ ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2 29.081581746732265 0.1611639662936252 4 [{I|L}T]{I|L}[WP]{I|L}{I|L}T{I|L} 9 4 + 53.536 0.0 0.0 5.0096 5.0096 85.151 0.0 0.0 0.0 8.895128731489123 26.17265099260453 8.895128731489123 20.45422902867609 0 0.5 1.6989700043360187 0.2215141619232908 0.0 [{I|L}T]{I|L}[WP]{I|L}{I|L}T{I|L};[Q{I|L}][RV]N{I|L}{I|L}T{I|L};[Q{I|L}][RV]GG{I|L}{I|L}T{I|L};[{I|L}T]{I|L}[RN]{I|L}{I|L}N{I|L};[KA]{[NV]|[RG]}[TP]{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}][{I|L}V]KN{I|L};[Q{I|L}][RV][KA]{I|L}E{I|L};[KA]{[NV]|[RG]}A[{I|L}V]{I|L}E{I|L};[KA]{[NV]|[RG]}A{I|L}{I|L}VE{I|L};[KA]{[NV]|[RG]}A[{I|L}V]KN{I|L} 5.0096;3.0957;2.234;2.059;1.8354;1.687;0.59151;0.35768;0.19291;0.19291 -;-;-;-;-;-;-;-;-;- 343 1 1.374 61957.9 1.0 12437 5023 17459 HBL1_DMSO_200M_050219_2,17462 HBL1_DMSO_200M_050219_2,17462,RVLQNLLTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17463 92.767 116.0 556360.0 25 0 75351.0 + 871 AEVDVNQKLLL 11 92 621.3575757175456 1240.7005985018911 2 621.3587524294853 MULTI CID FTMS 0 0 0 17459 419373.625 0.0070149507972456 9 -1.0174331665039062 4 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 38.61474834105838 0.2337350513322792 4 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L} 12 -1 + 94.261 0.0 0.0 7.5974 7.5974 86.108 0.0 0.0 0.0 4.956130378462476 15.106664456146277 4.956130378462476 4.956130378462476 0 2.274227503252014 1.5228787452803376 0.6549471895720985 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}VEVA{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}DVAN[K{I|L}]G{I|L}{I|L};{[VA]|[{I|L}G]}EDVA{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GEVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}VEVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}{I|L}G{I|L}EG{I|L}{I|L} 7.5974;7.1979;7.1067;6.8098;6.7072;6.6937;6.5856;6.4103;6.3191;6.1087 -;-;-;-;-;-;-;-;-;- 4185 1 1.374 53978.9 1.0 12438 5023 17459 HBL1_DMSO_200M_050219_2,17463 HBL1_DMSO_200M_050219_2,17463,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17464 92.77 151.0 359640.0 25 0 53623.0 + 9888 FPFPTPPSV 9 66 494.7607277296627 987.5069025261254 2 494.7609435915947 MULTI CID FTMS 0 0 0 17459 302073.46875 0.7788442293976351 -1 0.1225357055664062 5 Unmodified _FPFPTPPSV_ ENSG00000150990|ENST00000308736|DHX37 44.40701690623563 0.0526327925666318 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TP{M(Oxidation (M))|F}P 6 5 51.903 0.0 0.0 5.2559 0.0 0.0 0.0 298.1428027548941 298.1428027548941 35.24735947860492 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 1.1307196863200843 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TP{M(Oxidation (M))|F}P 5.2559 - 181 1 1.374 48192.7 1.0 12439 5023 17459 HBL1_DMSO_200M_050219_2,17464 HBL1_DMSO_200M_050219_2,17464,FPFPTPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17465 92.777 395.0 333450.0 25 0 48014.0 + 44749 YPLERGFIYV 10 92 628.8372056889573 1255.6598584447145 2 628.8380004763603 MULTI CID FTMS 0 0 0 17459 247148.984375 0.2183952078115378 3 -0.3236541748046875 6 Unmodified _YPLERGFIYV_ ENSG00000149136|ENST00000278412|SSRP1;ENST00000293880.9_1_11:57098199-57100416:-|nuORF 42.312485326615175 0.1331477410672653 4 YP{I|L}EA 5 6 43.193 0.0 0.0 3.4398 0.0 0.0 0.0 679.3384493463499 679.3384493463499 1.7820303319351112 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 YP{I|L}EA 3.4398 - 330 + 1 1.374 102295.1 1.0 12440 5023 17459 HBL1_DMSO_200M_050219_2,17465 HBL1_DMSO_200M_050219_2,17465,YPLERGFIYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17466 92.78 125.0 402720.0 25 0 51219.0 + 2957 AVIDEIQMI 9 92 516.2752514603266 1030.535949987453 2 516.2758056521416 MULTI CID FTMS 0 0 0 17459 228464.234375 0.431105873581291 -2 0.2381439208984375 7 Unmodified _AVIDEIQMI_ ENSG00000156502|ENST00000359655|SUPV3L1;ENST00000486661.1_1_10:70949041-70955032:+|nuORF 23.1484247019978 0.2366544122328345 4 {I|L}DVMQM{I|L} 7 4 32.893 0.0 0.0 3.1919 0.0 0.0 182.0989515517093 0.0 182.0989515517093 0.0 19.617129053615088 0.0 0.0 0 0.4177353201839437 0.0 0.0 0.0 {I|L}DVMQM{I|L} 3.1919 - 542 + 1 1.374 45896.8 1.0 12441 5023 17459 HBL1_DMSO_200M_050219_2,17466 HBL1_DMSO_200M_050219_2,17466,AVIDEIQMI False True AVIDEIQMI 92.780036 516.275805652142 4947912.5 17459.0 ENST00000486661.1_1_10:70949041-70955032:+|nuORF;;ENSG00000156502|ENST00000359655|SUPV3L1 1.8924607038497925 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17467 92.794 800.0 271380.0 25 0 44688.0 + 10278 FQYESKVFYL 10 133 662.3344152567812 1322.6542775803623 2 662.3345825076103 MULTI CID FTMS 0 0 0 17459 224672.15625 0.9351469051579866 -1 0.1225357055664062 8 Unmodified _FQYESKVFYL_ ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF 104.48436234954404 0.0061796757808163 4 [KS]EYV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L} 10 7 + 80.905 0.0 0.0 6.1169 6.1169 76.711 0.0 0.0 0.0 2.271416646418388 15.026975159433531 2.271416646418388 2.271416646418388 0 0.6694451763165201 0.0 2.430884548956689 0.3807196863200844 [KS]EYV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YESKV{M(Oxidation (M))|F}Y{I|L};[YE]SKV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L};[KS]EVY{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L};[KS]VEY{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L};[KS]EYV{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F}Y{I|L};{[TV]|[{I|L}S]}[SG]YV{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}Y{I|L};[YE]SKV{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F}Y{I|L};[KS]EVY{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F}Y{I|L};[KS]VEY{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F}Y{I|L} 6.1169;5.9452;5.822;5.68;5.5098;5.424;5.1866;5.1291;4.9871;4.8169 -;+;-;-;-;-;-;-;-;- + 7085 1 1.374 160930.6 0.7900000214576721 12442 5023 17459 HBL1_DMSO_200M_050219_2,17467 HBL1_DMSO_200M_050219_2,17467,FQYESKVFYL True True FQYESKVFYL 92.793873 662.33458250761 2413933.0 17459.0 ENSG00000128245|ENST00000248975|YWHAH;;ENST00000397492.1_1_22:32346295-32352776:+|nuORF 7.024673779805501 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17468 92.801 394.0 265230.0 25 0 39321.0 -1 0 112 939.9568481034072 1877.899143273614 2 940.4591552615166 MULTI CID FTMS 0 0 0 17459 214742.203125 0.9176576658746152 -1 0.1225357055664062 9 4 [{I|L}P]MK{I|L}N{I|L}{I|L} 8 -1 34.958 0.0 0.0 1.8616 0.0 0.0 0.0 952.302194381289 952.302194381289 -4.355509023322952 0.0 -4.355509023322952 0.0 0 0.0 0.6777807052660807 0.0 0.6549471895720984 [{I|L}P]MK{I|L}N{I|L}{I|L} 1.8616 - 1579 1 1.374 72170.0 1.0 12443 5023 17459 HBL1_DMSO_200M_050219_2,17468 HBL1_DMSO_200M_050219_2,17468, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17469 92.803 118.0 337740.0 25 0 22823.0 + 10233 FQMPTPIQM 9 81 546.7639194455434 1091.5132859578866 2 546.7643920779228 MULTI CID FTMS 0 0 0 17459 200371.546875 0.5978681976284961 2 -0.231353759765625 10 Unmodified _FQMPTPIQM_ ENSG00000278053|ENST00000617633|DDX52 32.30548876998284 0.1201446275138228 4 QM 2 7 16.51 0.0 0.0 1.5126 0.0 0.0 814.4034054420648 0.0 814.4034054420648 0.0 -1.91968657856572 -1.91968657856572 0.0 0 0.0 0.0 0.0 0.3807196863200844 + QM 1.5126 + + 143 + 1 1.374 39540.1 1.0 12444 5023 17459 HBL1_DMSO_200M_050219_2,17469 HBL1_DMSO_200M_050219_2,17469,FQMPTPIQM True True FQMPTPIQM 92.803419 546.764392077923 9905596.0 17459.0 ENSG00000278053|ENST00000617633|DDX52 7.571704387664795 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17470 92.806 138.0 287210.0 25 0 58303.0 6762 EDVLSSDIII 10 77 552.2954881975962 1102.5764234619924 2 552.2995483279228 MULTI CID FTMS 0 0 0 17459 201075.46875 1.0 0 0.0 11 Unmodified _EDVLSSDIII_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 19.256988751693697 0.5244284437930726 4 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]DDM{I|L}{I|L} 9 4 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]DDM + + 18.979 2.4642 0.28707 1.7214 1.7214 44.42 0.0 0.0 0.0 0.0 4.286662482156345 0.0 0.0 0 0.5 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]DDM{I|L}{I|L} 1.7214 - 47 + 1 1.374 40192.4 1.0 12445 5023 17459 HBL1_DMSO_200M_050219_2,17470 HBL1_DMSO_200M_050219_2,17470,EDVLSSDIII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17471 92.816 560.0 201880.0 25 0 51293.0 + 27648 PLGSPLLL 8 110 405.2602548229989 808.5059567127978 2 405.2604247927666 MULTI CID FTMS 0 0 0 17459 144406.859375 0.7269740286045218 5 -0.5741195678710938 12 Unmodified _PLGSPLLL_ ENST00000537708.1_1_12:6669555-6669804:-|nuORF 52.69307289633392 0.1265801145616722 4 [{I|L}P][SG]P{I|L}{I|L}{I|L} 8 0 + 44.002 0.0 0.0 5.4424 5.4424 81.064 0.0 0.0 0.0 9.264771768807591 22.118033645342194 9.264771768807591 7.474250108400469 0 0.6989700043360187 2.0 1.0356668758921828 0.0 + + [{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L};[PG]PS{I|L}{I|L}{I|L}{I|L};[PG]SP{I|L}{I|L}{I|L}{I|L};[PG]S{I|L}P{I|L}{I|L}{I|L};[PG]S{I|L}{I|L}P{I|L}{I|L} 5.4424;4.5179;4.0659;4.0393;3.0272;2.1028 +;-;-;-;-;- + 107 1 1.374 94230.2 1.0 12446 5023 17459 HBL1_DMSO_200M_050219_2,17471 HBL1_DMSO_200M_050219_2,17471,PLGSPLLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17472 92.825 426.0 142440.0 25 0 37024.0 + -1 LMMHLRCGFPA 11 79 646.3078699143236 1290.6011868954472 2 646.3064453005791 MULTI CID FTMS 0 0 0 17459 139166.171875 1.0 0 0.0 13 Oxidation (M) _LMM(Oxidation (M))HLRCGFPA_ REV__ENSG00000179846|ENST00000686631|NKPD1 13.90604991867851 0.7458848613461305 4 [DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}{I|L}S[YQ] 10 -1 + 58.703 0.0 0.0 4.5485 4.5485 78.887 0.0 0.0 0.0 29.01023442440469 5.764837301042718 5.764837301042718 9.164539485499256 0 0.0 2.0 0.6307196863200843 0.0 [DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}{I|L}S[YQ];[DV]{M(Oxidation (M))|F}[CG]{M(Oxidation (M))|F}{I|L}{I|L}S[YQ];[DV][HT]{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}S[YQ];W{[YC]|[HE]}{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}S[YQ];[DV]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){M(Oxidation (M))|F}{I|L}[WH][PA];W{M(Oxidation (M))|F}{I|L}[TP]{[{M(Oxidation (M))|F}C]|[YS]}S[YQ];[DV]{M(Oxidation (M))|F}[CG]{M(Oxidation (M))|F}{I|L}[WH][PA];W{I|L}{M(Oxidation (M))|F}[TP]{[{M(Oxidation (M))|F}C]|[YS]}S[YQ] 4.5485;3.8384;3.1604;2.5541;2.1444;1.7322;1.4343;0.97506 -;-;-;-;-;-;-;- 289 + 1 1.374 54993.7 1.0 12447 5023 17459 HBL1_DMSO_200M_050219_2,17472 HBL1_DMSO_200M_050219_2,17472,LMMHLRCGFPA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17473 92.833 443.0 183400.0 25 0 13259.0 -1 0 97 659.344492226124 1975.011647278572 3 659.6794921755791 MULTI CID FTMS 0 0 0 17459 134600.84375 0.7217026862278503 -1 0.1225357055664062 14 4 [TA]{I|L}D{I|L}V[{M(Oxidation (M))|F}T]STT{I|L} 12 -1 62.037 0.0 0.0 3.1411 0.0 0.0 0.0 709.3512296744765 709.3512296744765 27.10200035004867 0.0 0.0 0.0 0 1.0 2.0 0.6989700043360187 0.0 [TA]{I|L}D{I|L}V[{M(Oxidation (M))|F}T]STT{I|L} 3.1411 - 2597 1 1.374 67492.0 1.0 12448 5023 17459 HBL1_DMSO_200M_050219_2,17473 HBL1_DMSO_200M_050219_2,17473, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17474 92.847 800.0 145390.0 25 0 40360.0 -1 EKEMWHRMFAP 11 120 739.3383104894963 1476.6620680457925 2 739.3376953005791 MULTI CID FTMS 0 0 0 17459 125550.7734375 0.9957176177994332 -1 0.1225357055664062 15 Oxidation (M) _EKEM(Oxidation (M))WHRMFAP_ ENSG00000077800|ENST00000252037|FKBP6;nc|ENSG00000077800|O75344-2|FKBP6;nc|ENSG00000077800|O75344-3|FKBP6 12.240655878213236 0.7805268987462184 4 W{M(Oxidation (M))|F}{I|L}EY[DN]{I|L}SYQ 11 -1 + 70.116 0.0 0.0 4.7483 4.7483 78.234 0.0 0.0 0.0 7.667217886028624 9.128498242811006 7.667217886028624 7.667217886028624 0 1.0 0.0 1.4916440611282624 0.3252574989159953 W{M(Oxidation (M))|F}{I|L}EY[DN]{I|L}SYQ;[VS]{M(Oxidation (M))|F}{I|L}EC(Carbamidomethyl (C))[MT]{I|L}SYQ;[VS]{M(Oxidation (M))|F}EC(Carbamidomethyl (C))[MT]{I|L}{I|L}SYQ;W{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))M]{[ET]|[MV]}{I|L}SYQ;W{M(Oxidation (M))|F}E{I|L}Y[DN]{I|L}SYQ;[DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}][VS]{M(Oxidation (M))|F}{I|L}{I|L}SYQ;W{M(Oxidation (M))|F}{I|L}EY[DN]{I|L}SA[YG];[VS]{M(Oxidation (M))|F}E{I|L}C(Carbamidomethyl (C))[MT]{I|L}SYQ;[VS]{M(Oxidation (M))|F}{I|L}E[CG][MT]{I|L}SYQ;W{M(Oxidation (M))|F}{I|L}EC(Carbamidomethyl (C)){M(Oxidation (M))|F}VWYQ 4.7483;4.2291;4.1781;4.17;4.1375;4.0994;3.9263;3.6183;3.6129;3.5775 -;-;-;-;-;-;-;-;-;- 3998 + 1 1.374 84761.8 0.5600000023841858 12449 5023 17459 HBL1_DMSO_200M_050219_2,17474 HBL1_DMSO_200M_050219_2,17474,EKEMWHRMFAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17475 92.851 227.0 315580.0 25 0 43356.0 + + 23544 HLPDAAALLPV 11 101 558.8249693040424 0 558.8243896365166 PEAK CID FTMS 0 0 0 17459 104614.46875 0.4650989254410826 1 -0.1269989013671875 16 Unmodified _LTLLYPFHL_ ENST00000292591.11_1_5:179228908-179233794:-|nuORF 19.438996006549623 0.2061572778002301 4 {I|L}{I|L}H 3 -1 19.693 0.0 0.0 1.7652 0.0 0.0 214.1333024673541 535.2524508111936 749.3857532785478 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{I|L}H 1.7652 - 131 + 1 1.374 58537.3 1.0 12450 5023 17459 HBL1_DMSO_200M_050219_2,17475 HBL1_DMSO_200M_050219_2,17475,LTLLYPFHL False False HLPDAAALLPV 92.850827 558.824389636517 2784841.5 17459.0 ENST00000292591.11_1_5:179228908-179233794:-|nuORF 1.618341604868571 2.0 False 11.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17476 92.866 800.0 133030.0 25 0 11801.0 -1 0 90 1136.8114619139542 3407.412556342063 3 1137.474780261517 MULTI CID FTMS 0 0 0 17459 109268.9609375 1.0 0 0.0 17 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}EGGAMV{I|L} 10 -1 32.771 0.0 0.0 0.96176 0.0 0.0 0.0 2355.8778633091124 2355.8778633091124 27.28646588545097 0.0 0.0 0.0 0 0.0 0.0 1.2416440611282624 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}EGGAMV{I|L} 0.96176 - 1549 1 1.374 78134.5 0.4699999988079071 12451 5023 17459 HBL1_DMSO_200M_050219_2,17476 HBL1_DMSO_200M_050219_2,17476, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17477 92.88 800.0 107090.0 25 0 15561.0 39923 VFRNKRRIMRI 11 121 496.9749906791859 1487.9031426377578 3 496.9747192263603 MULTI CID FTMS 0 0 0 17459 105122.0 1.0 0 0.0 18 Unmodified _VFRNKRRIMRI_ ENST00000498447.5_1_8:42403781-42407748:+|nuORF 0.5059551277355931 0.8727608062196215 4 [MD]A 3 10 18.952 0.0 0.0 1.2738 0.0 0.0 0.0 1167.7752794387925 1167.7752794387925 5.853481135844877 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [MD]A 1.2738 - 122 1 1.374 80160.2 0.4600000083446502 12452 5023 17459 HBL1_DMSO_200M_050219_2,17477 HBL1_DMSO_200M_050219_2,17477,VFRNKRRIMRI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17478 92.884 230.0 345250.0 25 0 50644.0 + 32049 RVLDLSENFL 10 86 603.3301728407426 1204.6457927482852 2 603.3306762576103 MULTI CID FTMS 0 0 0 17459 95739.171875 0.2624178630842691 -2 0.2381439208984375 19 Unmodified _RVLDLSENFL_ ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9 28.181266145913348 0.3355154477840527 4 D{I|L}SEN{M(Oxidation (M))|F}{I|L} 7 3 68.576 0.0 0.0 5.6926 0.0 0.0 368.2535572736344 0.0 368.2535572736344 0.0 53.88312609025668 0.0 0.0 0 0.805462187404089 0.0 0.7742275032520141 0.3807196863200844 + D{I|L}SEN{M(Oxidation (M))|F}{I|L} 5.6926 + + 216 1 1.374 61076.0 1.0 12453 5023 17459 HBL1_DMSO_200M_050219_2,17478 HBL1_DMSO_200M_050219_2,17478,RVLDLSENFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17480 92.89 90.0 750850.0 25 0 111180.0 + 3184 AVVLPLARI 9 69 476.32115162604936 950.6277503188988 2 476.3212768435478 MULTI CID FTMS 0 0 0 17479 568627.8125 0.3341805590154145 2 -0.1966552734375 1 Unmodified _AVVLPLARI_ ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-1|IFI27 42.09456458481378 0.0639583784996157 4 {[VA]|[{I|L}G]}V{I|L}{I|L}P[{I|L}A]R 9 2 + 60.696 0.0 0.0 6.3848 6.3848 81.963 0.0 0.0 0.0 50.10014691612008 5.571516336144882 5.571516336144882 4.771212547196626 0 1.0 1.6989700043360187 0.0 0.805462187404089 {[VA]|[{I|L}G]}V{I|L}{I|L}P[{I|L}A]R;{[VA]|[{I|L}G]}V{I|L}P{I|L}[{I|L}A]R 6.3848;5.8829 -;- 116 + 1 1.381 55746.4 1.0 12454 5024 17479 HBL1_DMSO_200M_050219_2,17480 HBL1_DMSO_200M_050219_2,17480,AVVLPLARI True True AVVLPLARI 92.889862 476.321276843548 66632592.0 17479.0 nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27 3.234969218571981 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17481 92.891 54.0 917490.0 25 0 53295.0 + -1 KVLDIMPLTL 10 85 579.8418157046 1157.669078476 2 579.8439819216728 MULTI CID FTMS 0 0 0 17479 918876.8125 0.9466594326970064 1 -0.1043548583984375 2 Oxidation (M) _KVLDIM(Oxidation (M))PLTL_ nc|ENSG00000089737|Q9GZR7-2|DDX24;ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 34.93206674587334 0.2110832994570416 4 [{I|L}P]T{I|L}[YQ][{I|L}P][{I|L}T] 10 -1 + 43.53 0.0 0.0 3.7601 3.7601 70.381 0.0 0.0 0.0 7.7815125038364386 9.545059004810028 7.7815125038364386 3.807196863200844 0 0.8807196863200843 2.0 0.3807196863200844 0.0 [{I|L}P]T{I|L}[YQ][{I|L}P][{I|L}T];[{I|L}P]T{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}HH[{I|L}T];[{I|L}T]P{I|L}[YQ][{I|L}P][{I|L}T];[{I|L}T]P{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}HH[{I|L}T];[{I|L}P]T{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]{[YD]|[{M(Oxidation (M))|F}M]};[{I|L}T][Q{I|L}]{I|L}{M(Oxidation (M))|F}[{I|L}P][{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}[KS][YQ]{I|L}P[VP];[{I|L}T]P{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}P]{[YD]|[{M(Oxidation (M))|F}M]};[{I|L}P][WR]VHH[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[KS]{I|L}[Q{I|L}][VP] 3.7601;3.4312;3.0879;2.7591;2.7393;2.52;2.1751;2.0671;1.8659;1.758 -;-;-;-;-;-;-;-;-;- 279 1 1.381 47135.9 1.0 12455 5024 17479 HBL1_DMSO_200M_050219_2,17481 HBL1_DMSO_200M_050219_2,17481,KVLDIMPLTL False False KVLDIMPLTL 92.891258 579.843981921673 18989710.0 17479.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 6.30487060546875 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17482 92.893 69.0 1109500.0 25 0 230890.0 + 43935 YGIPAIVKL 9 65 487.3068622324066 972.5991715316133 2 487.3079711794853 MULTI CID FTMS 0 0 0 17479 820617.25 0.820439829886787 -2 0.2495346069335937 3 Unmodified _YGIPAIVKL_ ENSG00000173801|ENST00000393931|JUP;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 39.957323273325 0.0756908302845263 4 YG{I|L}PA{I|L}VK{I|L} 9 0 + 54.44 0.0 0.0 5.5974 5.5974 86.773 0.0 0.0 0.0 18.576315990684265 11.471449248951942 11.471449248951942 14.490925311194175 0 0.7429928190999391 1.3979400086720375 0.0 0.0 + + YG{I|L}PA{I|L}VK{I|L};YG{I|L}{I|L}[PA]VK{I|L} 5.5974;4.1075 +;- + 110 + 1 1.381 64730.3 1.0 12456 5024 17479 HBL1_DMSO_200M_050219_2,17482 HBL1_DMSO_200M_050219_2,17482,YGIPAIVKL True True YGIPAIVKL 92.892885 487.307971179485 50080926.0 17479.0 ENSG00000173801|ENST00000393931|JUP;;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 6.137124856313069 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17483 92.895 69.0 940810.0 25 0 68681.0 + 23325 LTAPEDVFSKL 11 77 610.3330207995796 1218.651488665959 2 610.3337280154228 MULTI CID FTMS 0 0 0 17479 501369.0625 1.0 0 0.0 4 Unmodified _LTAPEDVFSKL_ ENSG00000155561|ENST00000285968|NUP205 41.34703777101937 0.1916454788238683 4 {I|L}TAPEDV{M(Oxidation (M))|F}SK{I|L} 11 0 + 79.493 0.0 0.0 6.523 6.523 91.3 0.0 0.0 0.0 62.04596752522224 9.217142077613149 9.217142077613149 20.216977436784155 0 0.3807196863200844 1.6989700043360187 0.3807196863200844 0.0 + + {I|L}TAPEDV{M(Oxidation (M))|F}SK{I|L};{I|L}TAPEDV[YK]A{I|L};{I|L}TAP{[{M(Oxidation (M))|F}D]|MM}MRR{I|L};{I|L}TAP{[{M(Oxidation (M))|F}D]|MM}M[{I|L}A]K{I|L};{I|L}TAP{[{M(Oxidation (M))|F}D]|MM}M[K{I|L}]A{I|L};{I|L}TAP[WK][YQ]{[NV]|[RG]};{I|L}TAP{[QV]|[N{I|L}]|[RA]|[KV]}S[YQ]{[NV]|[RG]};{I|L}TAP{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))K][R{M(Oxidation (M))|F}];[VP]YY[WK]PA[VP];[VP]YYS{[QV]|[N{I|L}]|[RA]|[KV]}PA[VP] 6.523;4.8641;4.4674;4.3685;3.922;3.7891;3.7551;3.2408;2.0113;1.9773 +;-;-;-;-;-;-;-;-;- + 276 + 1 1.381 53146.2 1.0 12457 5024 17479 HBL1_DMSO_200M_050219_2,17483 HBL1_DMSO_200M_050219_2,17483,LTAPEDVFSKL False True LTAPEDVFSKL 92.894529 610.333728015423 4524480.5 17479.0 ENSG00000155561|ENST00000285968|NUP205 5.66217581431071 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17484 92.898 159.0 401900.0 25 0 52340.0 + 11800 GLMALGGIYL 10 106 504.2812565677659 1006.547960202332 2 504.2808410525322 MULTI CID FTMS 0 0 0 17479 223283.71875 1.0 0 0.0 5 Unmodified _GLMALGGIYL_ ENST00000496325.5_1_1:2006789-2066779:+|nuORF 32.116972079565 0.2470863257317063 4 [VS]W{I|L}N{I|L}{I|L}Y 8 7 + 51.604 0.0 0.0 5.1268 5.1268 79.143 0.0 0.0 0.0 9.275304762000689 10.924778212679485 9.275304762000689 6.817496819840656 0 0.6549471895720985 1.3010299956639813 0.1861818737241735 0.3807196863200844 [VS]W{I|L}N{I|L}{I|L}Y;[VS]W{I|L}{I|L}N{I|L}Y;[VS]WN{I|L}{I|L}{I|L}Y;{[VA]|[{I|L}G]}AM{I|L}N{I|L}{I|L}Y;[VS]W{I|L}GG{I|L}{I|L}Y;[Q{I|L}]M{I|L}N{I|L}{I|L}Y;[VS]W{I|L}{I|L}GG{I|L}Y;{[VA]|[{I|L}G]}AM{I|L}{I|L}N{I|L}Y;{[VA]|[{I|L}G]}AMN{I|L}{I|L}{I|L}Y;[EP]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}Y 5.1268;4.4495;4.3537;4.2053;3.8284;3.553;3.5293;3.528;3.4322;3.362 -;-;-;-;-;-;-;-;-;- 411 1 1.381 53851.6 1.0 12458 5024 17479 HBL1_DMSO_200M_050219_2,17484 HBL1_DMSO_200M_050219_2,17484,GLMALGGIYL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17485 92.904 376.0 271110.0 25 0 46127.0 + 22244 LPRIFTSI 8 123 473.789514499717 945.564476066234 2 473.7896301150322 MULTI CID FTMS 0 0 0 17479 210966.53125 0.9777099058870096 1 -0.1043548583984375 6 Unmodified _LPRIFTSI_ ENSG00000167085|ENST00000300408|PHB1;ENST00000355202.8_1_19:38187835-38188303:-|nuORF;ENST00000393345.8_1_17:47486298-47490626:-|nuORF;nc|ENSG00000167085|P35232-2|PHB1 61.357469665136826 0.1155423183535659 4 [{I|L}P]R{I|L}{M(Oxidation (M))|F}TS{I|L} 8 0 + 54.349 0.0 0.0 5.7478 5.7478 81.831 0.0 0.0 0.0 6.903698325741004 14.9046305952634 6.903698325741004 6.903698325741004 0 0.9247425010840048 0.9208187539523752 1.0 0.2614393726401688 + + [{I|L}P]R{I|L}{M(Oxidation (M))|F}TS{I|L};[RP]{I|L}{I|L}{M(Oxidation (M))|F}TS{I|L} 5.7478;5.0177 +;- + 215 1 1.381 80196.7 1.0 12459 5024 17479 HBL1_DMSO_200M_050219_2,17485 HBL1_DMSO_200M_050219_2,17485,LPRIFTSI True True LPRIFTSI 92.904408 473.789630115032 6832133.0 17479.0 ENSG00000167085|ENST00000300408|PHB1;;ENST00000393345.8_1_17:47486298-47490626:-|nuORF;;ENST00000355202.8_1_19:38187835-38188303:-|nuORF;;nc|ENSG00000167085|P35232-2|PHB1 2.6412691672643027 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17486 92.913 492.0 216290.0 25 0 25172.0 + -1 AECSGPLSCSL 11 143 590.7538990044483 1179.4932450756964 2 590.7549316287041 MULTI CID FTMS 0 0 0 17479 182694.3125 0.379330736556776 -2 0.2495346069335937 7 2 Carbamidomethyl (C) _AEC(Carbamidomethyl (C))SGPLSC(Carbamidomethyl (C))SL_ REV__ENSG00000254415|ENST00000360844|SIGLEC14;REV__nc|ENSG00000268500|O15389|SIGLEC5 22.736283301280096 0.5583477779825423 4 {[QS]|[NT]}Y[YE]Y{I|L}{[QS]|[NT]} 9 -1 + 50.555 0.0 0.0 4.2862 4.2862 73.966 0.0 0.0 0.0 6.042258145361501 8.99350909026333 6.042258145361501 5.173553521896167 0 0.0 0.9208187539523752 1.2104093769761877 0.6109243748081782 {[QS]|[NT]}Y[YE]Y{I|L}{[QS]|[NT]};{[QS]|[NT]}YHCNT{I|L}{[QS]|[NT]};{[QS]|[NT]}[HQ]CSY{I|L}{[QS]|[NT]};{[QS]|[NT]}YYYE{I|L}{[QS]|[NT]};[{I|L}T]CYCSY{I|L}{[QS]|[NT]};[AG]SY[YE]Y{I|L}{[QS]|[NT]};[AG]S[HQ]CSY{I|L}{[QS]|[NT]};[AG]SYHCNT{I|L}{[QS]|[NT]};{[{M(Oxidation (M))|F}C]|[YS]}Q[YE]Y{I|L}{[QS]|[NT]};{[ES]|[DT]|[{I|L}C]}TYCSY{I|L}{[QS]|[NT]} 4.2862;3.8476;3.8045;3.4794;3.3537;3.0165;2.7601;2.5815;2.5121;2.4096 -;-;-;-;-;-;-;-;-;- 2235 1 1.381 83011.5 1.0 12460 5024 17479 HBL1_DMSO_200M_050219_2,17486 HBL1_DMSO_200M_050219_2,17486,AECSGPLSCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17487 92.921 454.0 219380.0 25 0 53318.0 + 27805 PLPQSLSLL 9 110 484.2944500917035 966.574347250207 2 484.2945434451103 MULTI CID FTMS 0 0 0 17479 169198.40625 0.8247616357926524 -4 0.4370956420898437 8 Unmodified _PLPQSLSLL_ ENST00000591445.1_1_17:67501802-67515615:+|nuORF 37.97399986684836 0.0865783450051559 4 [{I|L}P]QPSS{I|L}{I|L}{I|L} 9 3 + 83.867 0.0 0.0 8.6767 8.6767 92.914 0.0 0.0 0.0 16.434526764861886 16.478174818886373 16.434526764861886 9.208187539523747 0 0.7302046884880937 1.6989700043360187 1.274227503252014 0.0 [{I|L}P]QPSS{I|L}{I|L}{I|L};[{I|L}P][AG]PSS{I|L}{I|L}{I|L};[Q{I|L}]PPSS{I|L}{I|L}{I|L};[QP]P{I|L}SS{I|L}{I|L}{I|L};[AG]PP{I|L}SS{I|L}{I|L}{I|L};[{I|L}P]QP{I|L}{[CA]|SS}{I|L}{I|L};[QP]{I|L}PSS{I|L}{I|L}{I|L};[{I|L}P]QP{[WT]|[RM]}{I|L}{I|L};[AG]P{I|L}PSS{I|L}{I|L}{I|L};[AG]{I|L}PPSS{I|L}{I|L}{I|L} 8.6767;7.724;6.9764;6.6895;6.2928;6.2472;6.1958;5.8885;5.7992;5.4449 -;-;-;-;-;-;-;-;-;- 374 1 1.381 81311.0 1.0 12461 5024 17479 HBL1_DMSO_200M_050219_2,17487 HBL1_DMSO_200M_050219_2,17487,PLPQSLSLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17488 92.931 543.0 254430.0 25 0 21851.0 + 10810 FYVDSDMVNEF 11 146 683.2865319804339 1364.5585110276677 2 683.2874023318291 MULTI CID FTMS 0 0 0 17479 159204.421875 0.8272624477464487 -1 0.1269989013671875 9 Unmodified _FYVDSDMVNEF_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 69.10491478415734 0.0349985100263309 4 [YV]{M(Oxidation (M))|F}DSDMV 8 5 28.075 0.0 0.0 2.0575 0.0 0.0 0.0 405.141066529874 405.141066529874 6.5728801709655365 0.0 0.0 0.0 0 0.2887254899964357 0.6575773191777937 1.055462187404089 0.0 [YV]{M(Oxidation (M))|F}DSDMV 2.0575 - 2801 1 1.381 102892.0 1.0 12462 5024 17479 HBL1_DMSO_200M_050219_2,17488 HBL1_DMSO_200M_050219_2,17488,FYVDSDMVNEF True True FYVDSDMVNEF 92.9307 683.287402331829 3869009.75 17479.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 7.506276607513428 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17489 92.945 800.0 168820.0 25 0 14215.0 + 38446 KLFGDPDEFPLA 12 120 674.8429433515558 1347.6713337699116 2 674.8432494997978 MULTI CID FTMS 0 0 0 17479 146537.578125 1.0 0 0.0 10 Unmodified _TRYHTWGIMAL_ ENSG00000090470|ENST00000204549|PDCD7 12.240655878213236 0.7805268987462184 4 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}NPDE{M(Oxidation (M))|F}PA{I|L} 12 8 + 65.197 0.0 0.0 4.8378 4.8378 73.924 0.0 0.0 0.0 3.979400086720375 9.124628150806371 3.979400086720375 3.578409410397469 0 0.5484550065040282 0.6989700043360187 1.0941876774005248 0.0 {[TV]|[{I|L}S]}V{M(Oxidation (M))|F}NPDE{M(Oxidation (M))|F}PA{I|L};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}NPDEP{M(Oxidation (M))|F}A{I|L};[VS]{I|L}{M(Oxidation (M))|F}NPDE{M(Oxidation (M))|F}PA{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[MG]|[TS]}KPDE{M(Oxidation (M))|F}PA{I|L};[VS]{I|L}{M(Oxidation (M))|F}NPDEP{M(Oxidation (M))|F}A{I|L};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}GGPDE{M(Oxidation (M))|F}PA{I|L};{[TV]|[{I|L}S]}[MT]KPDE{M(Oxidation (M))|F}PA{I|L};{[CT]|[{M(Oxidation (M))|F}G]}D{I|L}KPDE{M(Oxidation (M))|F}PA{I|L};{[TV]|[{I|L}S]}V{M(Oxidation (M))|F}GGPDEP{M(Oxidation (M))|F}A{I|L};[VS]{I|L}{M(Oxidation (M))|F}GGPDE{M(Oxidation (M))|F}PA{I|L} 4.8378;4.5723;4.5425;4.4229;4.277;4.1627;4.1326;4.0481;3.8971;3.8674 -;-;-;-;-;-;-;-;-;- 1758 1 1.381 101834.0 0.6299999952316284 12463 5024 17479 HBL1_DMSO_200M_050219_2,17489 HBL1_DMSO_200M_050219_2,17489,TRYHTWGIMAL False False KLFGDPDEFPLA 92.944531 674.843249499798 1274107.375 17479.0 ENSG00000090470|ENST00000204549|PDCD7 6.5774180094401045 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17490 92.958 800.0 125870.0 25 0 8680.6 + 33456 SIFGEDALANV 11 105 1135.5637292706522 1134.5564528040522 1 1135.565478503704 MULTI CID FTMS 0 0 0 17479 119520.515625 1.0 0 0.0 11 Unmodified _SIFGEDALANV_ ENSG00000129083|ENST00000439561|COPB1 76.82478488871298 0.0126262996361648 4 DA{I|L}S{I|L}ANV 8 7 63.895 0.0 0.0 5.6317 0.0 0.0 333.1338062970719 0.0 333.1338062970719 0.0 24.693962872398032 0.0 0.0 0 0.0 0.0 1.8252574989159955 0.3807196863200844 DA{I|L}S{I|L}ANV 5.6317 - 1275 1 1.381 66975.7 0.5899999737739563 12464 5024 17479 HBL1_DMSO_200M_050219_2,17490 HBL1_DMSO_200M_050219_2,17490,SIFGEDALANV True True SIFGEDALANV 92.958395 1135.5654785037 4314461.25 17479.0 ENSG00000129083|ENST00000439561|COPB1 8.016132672627768 1.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17491 92.963 227.0 277570.0 25 0 32189.0 -1 VICDLDVTI 9 108 524.2743617303506 1046.5341705275011 2 524.7770263552666 MULTI CID FTMS 0 0 0 17479 113447.640625 1.0 0 0.0 12 Carbamidomethyl (C) _VIC(Carbamidomethyl (C))DLDVTI_ Tigger1_dup3614|chr4:153370819-153372334:-|1.1451237488797577|0.4461990466272801|1.36|48.0|1|1|sense 19.438996006549623 0.310492472477042 4 {[QN]|[E{I|L}]|[KN]}P[RP]E{I|L}{[HG]|PP} 9 -1 + 35.722 0.0 0.0 3.4133 3.4133 70.099 0.0 0.0 0.0 4.283255599769124 4.283255599769124 4.283255599769124 4.283255599769124 0 0.3252574989159953 1.154901959985743 0.3807196863200844 0.0 {[QN]|[E{I|L}]|[KN]}P[RP]E{I|L}{[HG]|PP};[DP]{I|L}E[H{I|L}]QPV;[{I|L}T]Q[H{I|L}]E{I|L}{[HG]|PP};[EP]{I|L}[RP]E{I|L}{[HG]|PP};[DP]{I|L}E[H{I|L}][NP]{I|L};{[VA]|[{I|L}G]}AT[H{I|L}]E{I|L}{[HG]|PP};[DP]{I|L}E[H{I|L}][AG]PV;[{I|L}T][AG][H{I|L}]E{I|L}{[HG]|PP};[Q{I|L}]T[H{I|L}]E{I|L}{[HG]|PP};[VS][VG][H{I|L}]E{I|L}{[HG]|PP} 3.4133;3.0041;2.9153;2.5974;2.5515;2.1988;1.8134;1.7247;1.5254;0.9824 -;-;-;-;-;-;-;-;-;- 270 1 1.381 57517.0 1.0 12465 5024 17479 HBL1_DMSO_200M_050219_2,17491 HBL1_DMSO_200M_050219_2,17491,VICDLDVTI False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 17492 92.978 800.0 170640.0 25 0 8023.2 + 36467 TAAMSVDLPGE 11 123 1090.5089637343954 1089.5016872677954 1 1092.522998034954 MULTI CID FTMS 0 0 0 17479 108267.0234375 0.4353851317866564 -8 0.8704757690429688 13 Unmodified _TAAMSVDLPGE_ REV__ENSG00000119242|ENST00000238156|CCDC92;REV__ENST00000544798.2_1_12:124408671-124428876:-|nuORF 21.53697664764585 0.586507868110548 4 [EP]VEPPPP[DN] 10 -1 + 56.106 0.0 0.0 5.1497 5.1497 71.72 0.0 0.0 0.0 10.748191035580504 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.0 1.2218487496163564 0.3252574989159953 0.0 [EP]VEPPPP[DN];[EP]VEPP[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}NPPPPP[DN];{[QD]|[EN]|[WG]|[KD]|[RS]}NPPP[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F};[EP]VEPP[HA]{[QS]|[NT]};{[QS]|[NT]}EPPPPN[QP];{[QD]|[EN]|[WG]|[KD]|[RS]}GGPPPPP[DN];{[QD]|[EN]|[WG]|[KD]|[RS]}NPPP[HA]{[QS]|[NT]};[EP]VEP[YK][DN];[EP]VEPQHG[TP] 5.1497;4.9881;4.1632;4.0015;3.9813;3.4994;3.322;3.2464;3.2448;3.1827 -;-;-;-;-;-;-;-;-;- 7843 1 1.381 87390.9 0.5899999737739563 12466 5024 17479 HBL1_DMSO_200M_050219_2,17492 HBL1_DMSO_200M_050219_2,17492,TAAMSVDLPGE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17493 92.988 592.0 144140.0 25 0 9537.8 -1 0 120 729.3518989421063 2185.033867426519 3 729.3541137576103 MULTI CID FTMS 0 0 0 17479 111026.5625 0.7170727020916479 -2 0.2495346069335937 14 4 [YQ]{I|L}EN[WR]YNE{I|L} 11 -1 54.112 0.0 0.0 2.4765 0.0 0.0 0.0 673.3042075682637 673.3042075682637 23.47682940033597 0.0 0.0 0.0 0 0.0 0.0 0.0 2.309894379144197 [YQ]{I|L}EN[WR]YNE{I|L} 2.4765 - 3942 1 1.381 77463.5 1.0 12467 5024 17479 HBL1_DMSO_200M_050219_2,17493 HBL1_DMSO_200M_050219_2,17493, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17495 92.993 25.0 2792500.0 25 0 395640.0 + 11738 GLIEILKKV 9 80 506.84210674645846 1011.6696605597168 2 506.8423034548759 MULTI CID FTMS 0 0 0 17494 2017735.75 0.6451449759949379 2 -0.1950149536132812 1 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 71.92227651296345 0.0203558744033348 4 VA{I|L}E{I|L}{I|L}KKV 9 2 + 101.86 0.0 0.0 10.068 10.068 99.74 0.0 0.0 0.0 70.95481365644459 11.271211393095257 11.271211393095257 101.85770115577532 0 2.004432191740108 2.0 0.4247425010840047 0.2396518287104437 VA{I|L}E{I|L}{I|L}KKV 10.068 - 334 + 1 1.391 60936.4 1.0 12468 5025 17494 HBL1_DMSO_200M_050219_2,17495 HBL1_DMSO_200M_050219_2,17495,GLIEILKKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17496 92.994 28.0 2041800.0 25 0 421940.0 + 11740 GLIEILKKV 9 65 338.23059400281863 1011.669952608656 3 338.2302734255791 MULTI CID FTMS 0 0 0 17494 1461798.75 0.5296365566203086 1 -0.0923004150390625 2 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 29.081581746732265 0.1611639662936252 4 {[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KKV 9 0 + 67.851 0.0 0.0 6.7068 6.7068 93.851 0.0 0.0 0.0 38.18514529734232 8.197859905088634 8.197859905088634 67.85090774247281 0 0.3054621874040891 2.0 0.4247425010840047 0.0 + + {[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KKV 6.7068 + + 94 + 1 1.391 51979.2 1.0 12469 5025 17494 HBL1_DMSO_200M_050219_2,17496 HBL1_DMSO_200M_050219_2,17496,GLIEILKKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17497 92.996 25.0 2701900.0 25 0 585570.0 + 34399 SLVDEFKEL 9 75 540.2846411817512 1078.5547294303024 2 540.2850219607353 MULTI CID FTMS 0 0 0 17494 2066676.875 1.0 0 0.0 3 Unmodified _SLVDEFKEL_ ENSG00000196419|ENST00000360079|XRCC6;ENST00000478914.1_1_22:42052971-42057696:+|nuORF;nc|ENSG00000196419|P12956-2|XRCC6 34.221707139014875 0.1071766711162635 4 {[TV]|[{I|L}S]}VDE{M(Oxidation (M))|F} 6 3 62.695 0.0 0.0 5.8128 0.0 0.0 0.0 385.21028115659385 385.21028115659385 17.084296476126326 0.0 0.0 0.0 0 0.805462187404089 2.0 1.0994850021680094 0.0 + {[TV]|[{I|L}S]}VDE{M(Oxidation (M))|F} 5.8128 + + 695 + 1 1.391 58220.6 1.0 12470 5025 17494 HBL1_DMSO_200M_050219_2,17497 HBL1_DMSO_200M_050219_2,17497,SLVDEFKEL True True SLVDEFKEL 92.995503 540.285021960735 32588812.0 17494.0 ENSG00000196419|ENST00000360079|XRCC6;;nc|ENSG00000196419|P12956-2|XRCC6;;ENST00000478914.1_1_22:42052971-42057696:+|nuORF 6.136712869008382 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17498 92.997 29.0 2257600.0 25 0 240200.0 + 3087 AVNPIIYSF 9 87 512.2792297186097 1022.5439065040194 2 512.2795287966728 MULTI CID FTMS 0 0 0 17494 1848453.125 0.3492174383793179 -3 0.3538894653320312 4 Unmodified _AVNPIIYSF_ ENSG00000125910|ENST00000246115|S1PR4 42.09456458481378 0.0639583784996157 4 [VP]NA{I|L}Y 6 5 43.773 0.0 0.0 4.2808 0.0 0.0 0.0 362.1706554496979 362.1706554496979 18.8375789050216 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 1.079689690656103 [VP]NA{I|L}Y 4.2808 - 210 1 1.391 58155.9 1.0 12471 5025 17494 HBL1_DMSO_200M_050219_2,17498 HBL1_DMSO_200M_050219_2,17498,AVNPIIYSF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17499 92.998 47.0 1105900.0 25 0 159710.0 + 24793 MPIKINLI 8 80 471.2962935842053 940.5780342352108 2 471.2963744997978 MULTI CID FTMS 0 0 0 17494 1056866.125 0.0414978777645131 6 -0.6329879760742188 5 Unmodified _MPIKINLI_ ENSG00000134001|ENST00000256383|EIF2S1 40.44857923139169 0.2267865117615937 4 [{I|L}P]K{I|L}NM{I|L}{I|L} 8 2 + 49.645 0.0 0.0 5.2781 5.2781 74.247 0.0 0.0 0.0 2.7733575668462294 -8.336134377877329 -8.336134377877329 2.985250557545612 0 0.5994850021680094 2.0 0.0 0.3807196863200844 [{I|L}P]K{I|L}NM{I|L}{I|L};MP{I|L}[R{I|L}]RR;[{I|L}P]K{I|L}GGM{I|L}{I|L};[K{I|L}]P{I|L}NM{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KPM{I|L}{I|L};[K{I|L}]P{I|L}GGM{I|L}{I|L};[K{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}PM{I|L}{I|L} 5.2781;4.9608;4.2934;2.7606;2.3606;1.7758;1.1718 -;-;-;-;-;-;- 203 1 1.391 47003.6 1.0 12472 5025 17494 HBL1_DMSO_200M_050219_2,17499 HBL1_DMSO_200M_050219_2,17499,MPIKINLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17500 93.0 106.0 862530.0 25 0 50564.0 + 29344 QIVELIEKI 9 106 542.8344266508407 1083.6543003684812 2 542.8343994021416 MULTI CID FTMS 0 0 0 17494 490459.375 0.478588174794781 1 -0.0923004150390625 6 Unmodified _QIVELIEKI_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 59.36838082759317 0.0264317782606298 4 [Q{I|L}]VE{I|L}{I|L}EK{I|L} 9 0 [Q{I|L}] + + 58.182 18.966 7.865 5.3691 5.3691 54.064 0.0 0.0 0.0 0.0 40.75946782261354 0.0 0.0 0 1.0451140161145327 0.0 0.9361818737241736 0.1694451763165201 + + [Q{I|L}]VE{I|L}{I|L}EK{I|L} 5.3691 + + 958 + 1 1.391 76945.7 1.0 12473 5025 17494 HBL1_DMSO_200M_050219_2,17500 HBL1_DMSO_200M_050219_2,17500,QIVELIEKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17501 93.002 102.0 461510.0 25 0 109900.0 7430 EGLRLNLL 8 83 464.2848986892532 926.5552444453064 2 464.2851135134697 MULTI CID FTMS 0 0 0 17494 438183.28125 0.4038190382551808 2 -0.1950149536132812 7 Unmodified _EGLRLNLL_ ENST00000526748.1_1_14:75536435-75544319:+|nuORF 41.8396318013385 0.2035142800366642 4 {[DA]|[EG]}{I|L}R{I|L}N{I|L}{I|L} 8 0 + 54.786 0.0 0.0 5.9129 5.9129 79.325 0.0 0.0 0.0 4.203103093438969 14.024174299985006 4.203103093438969 4.203103093438969 0 1.3182503180159344 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}{I|L}R{I|L}N{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}N{I|L}{I|L};{[DA]|[EG]}{I|L}R{I|L}GG{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}GG{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[VG]W{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}R{[DA]|[EG]}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[VG]{[DA]|[EG]}{I|L}{I|L};[KA]QQ{I|L}N{I|L}{I|L};[KA]QQ{I|L}GG{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}R{[QV]|[N{I|L}]|[RA]|[KV]}{[QG]|[NA]} 5.9129;5.4593;4.9133;4.4597;3.7605;3.7605;2.7609;2.4418;1.4422;1.3872 +;-;-;-;-;-;-;-;-;- + 200 1 1.391 42630.9 1.0 12474 5025 17494 HBL1_DMSO_200M_050219_2,17501 HBL1_DMSO_200M_050219_2,17501,EGLRLNLL False True DALRLNLL 93.002401 464.28511351347 19504304.0 17494.0 ENSG00000143614|ENST00000368655|GATAD2B 3.138243834177653 2.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17502 93.005 129.0 634390.0 25 0 88190.0 + 16803 KGNHGRIYL 9 117 529.3001695460804 1056.585786158961 2 529.3008300662041 MULTI CID FTMS 0 0 0 17494 281630.75 0.2585084903905762 9 -1.0502853393554688 8 Unmodified _KGNHGRIYL_ REV__ENSG00000196367|ENST00000456197|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5|TRRAP 28.486842064014134 0.1687311288560894 4 {I|L}VQQY{I|L} 6 -1 30.507 0.0 0.0 2.8873 0.0 0.0 294.1573667271495 0.0 294.1573667271495 0.0 14.791453929929528 0.0 0.0 0 0.0 0.0 0.0 0.6861818737241735 {I|L}VQQY{I|L} 2.8873 - 495 + 1 1.391 67251.7 1.0 12475 5025 17494 HBL1_DMSO_200M_050219_2,17502 HBL1_DMSO_200M_050219_2,17502,KGNHGRIYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17503 93.008 140.0 616880.0 25 0 78918.0 + 36311 SYLFSHVPL 9 109 531.7844917538179 1061.5544305744356 2 531.7806274294853 MULTI CID FTMS 0 0 0 17494 282680.28125 0.1549064506227617 -2 0.231353759765625 9 Unmodified _SYLFSHVPL_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 28.486842064014134 0.1687311288560894 4 [HS]{M(Oxidation (M))|F}V[YT]VP{I|L} 9 5 + 33.463 0.0 0.0 3.1523 3.1523 69.432 0.0 0.0 0.0 4.299377089902666 8.976949551052371 4.299377089902666 4.299377089902666 0 1.0044321917401078 0.6020599913279624 0.3807196863200844 0.0 [HS]{M(Oxidation (M))|F}V[YT]VP{I|L};[HV]S{M(Oxidation (M))|F}[YT]VP{I|L};[HS]V{M(Oxidation (M))|F}[YT]VP{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[KQ]{I|L}DVP{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[KQ]VEVP{I|L};QQV[HV]V[HC]{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}D[YT]VP{I|L};{I|L}{I|L}TD{I|L}{[YD]|[{M(Oxidation (M))|F}M]}P{I|L};{I|L}{I|L}TDYEVP{I|L};[HV]S[QA]PDVP{I|L} 3.1523;2.7473;2.5101;2.0023;1.7933;1.6121;1.4462;1.44;1.4118;1.4052 -;-;-;-;-;-;-;-;-;- 491 1 1.391 68582.5 1.0 12476 5025 17494 HBL1_DMSO_200M_050219_2,17503 HBL1_DMSO_200M_050219_2,17503,SYLFSHVPL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17504 93.011 160.0 330020.0 25 0 40447.0 + 12644 GVLDPRLLVGC 11 69 571.3235956347061 1140.632638336212 2 571.3242065310478 MULTI CID FTMS 0 0 0 17494 204730.203125 0.5970395657156063 1 -0.0923004150390625 10 Unmodified _GVLDPRLLVGC_ ENSG00000120942|ENST00000376810|UBIAD1;nc|ENSG00000120942|Q9Y5Z9-2|UBIAD1 28.49450938151212 0.4231428536161201 4 [VG]{I|L}{I|L}PR{NN|[MP]|[D{I|L}]|[EV]}VC(Carbamidomethyl (C)) 10 3 + 75.679 0.0 0.0 6.6348 6.6348 80.059 0.0 0.0 0.0 18.40620618687793 63.68948444925195 18.40620618687793 3.0102999566398125 0 1.5044321917401078 1.6989700043360187 0.0 0.0 [VG]{I|L}{I|L}PR{NN|[MP]|[D{I|L}]|[EV]}VC(Carbamidomethyl (C));[VG]{I|L}{I|L}PV{[RE]|[WV]}VC(Carbamidomethyl (C));[VG]{I|L}{I|L}PV{NN|[MP]|[D{I|L}]|[EV]}RC(Carbamidomethyl (C));{[VA]|[{I|L}G]}V{I|L}PR{NN|[MP]|[D{I|L}]|[EV]}VC(Carbamidomethyl (C));{[VA]|[{I|L}G]}V{I|L}PV{[RE]|[WV]}VC(Carbamidomethyl (C));{[VA]|[{I|L}G]}V{I|L}PV{NN|[MP]|[D{I|L}]|[EV]}RC(Carbamidomethyl (C)) 6.6348;6.3709;6.0645;4.3547;4.0908;3.7844 -;-;-;-;-;- 222 1 1.391 50718.1 1.0 12477 5025 17494 HBL1_DMSO_200M_050219_2,17504 HBL1_DMSO_200M_050219_2,17504,GVLDPRLLVGC False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17505 93.014 148.0 531500.0 25 0 63643.0 + 19496 LFLEKAMQL 9 105 546.8095531216218 1091.6045533100437 2 546.8107177615166 MULTI CID FTMS 0 0 0 17494 200897.90625 0.0828279745226081 -2 0.231353759765625 11 Unmodified _LFLEKAMQL_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 71.92227651296345 0.0203558744033348 4 {I|L}{M(Oxidation (M))|F}{I|L}E[KA]MQ{I|L} 9 0 + 62.466 0.0 0.0 5.7224 5.7224 86.903 0.0 0.0 0.0 44.775364019509205 12.274768517631776 12.274768517631776 13.015384402724592 0 0.75 0.0 0.4247425010840047 1.5189301784845295 + + {I|L}{M(Oxidation (M))|F}{I|L}E[KA]MQ{I|L};{I|L}{M(Oxidation (M))|F}{I|L}E[KA]M[AG]{I|L};{I|L}{M(Oxidation (M))|F}{I|L}E[KA]{[WS]|[C(Carbamidomethyl (C)){I|L}]}V;{I|L}{M(Oxidation (M))|F}{I|L}E[KA]MAAV;{I|L}{M(Oxidation (M))|F}{I|L}E[KA][PG]{[MS]|[{M(Oxidation (M))|F}A]};{I|L}{M(Oxidation (M))|F}{I|L}[YN]{I|L}[NP]V;{I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}VVMQ{I|L};{I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}[NP]V;{[TV]|[{I|L}S]}G{I|L}A{M(Oxidation (M))|F}QQKT;{[QN]|[E{I|L}]|[KN]}KA{M(Oxidation (M))|F}QQKT 5.7224;4.5301;3.9786;3.7028;3.2076;2.9024;2.6862;2.0864;1.7859;1.5125 +;-;-;-;-;-;-;-;-;- + 1033 + 1 1.391 63742.1 1.0 12478 5025 17494 HBL1_DMSO_200M_050219_2,17505 HBL1_DMSO_200M_050219_2,17505,LFLEKAMQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17506 93.019 243.0 467340.0 25 0 50960.0 + 7862 ELLKYLEEI 9 121 575.3231961134347 1148.6318392936694 2 575.3222534060478 MULTI CID FTMS 0 0 0 17494 190635.078125 0.0710264556999047 -2 0.231353759765625 12 Unmodified _ELLKYLEEI_ REV__ENSG00000127603|ENST00000564288|MACF1;REV__nc|ENSG00000127603|Q9UPN3-2|MACF1;REV__nc|ENSG00000127603|Q9UPN3-3|MACF1;REV__nc|ENSG00000127603|Q9UPN3-4|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1 51.487983226225225 0.0371074584807926 4 {[QN]|[E{I|L}]|[KN]}{I|L}KY{I|L}EE{I|L} 9 -1 + 80.521 0.0 0.0 7.0102 7.0102 76.104 0.0 0.0 0.0 8.732813580085889 16.478174818886373 8.732813580085889 0.2557626122369072 0 0.6382104921644451 0.8538719643217619 1.3996498648046138 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}KY{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KYE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}KE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}YE{I|L}K{I|L}E{I|L};[Y{I|L}]E{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}YK{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}EY{I|L}K{I|L}E{I|L};[K{I|L}]{I|L}EY{I|L}EE{I|L};[Y{I|L}]E{I|L}KE{I|L}E{I|L} 7.0102;6.9879;6.6477;6.6254;6.3285;6.2499;6.225;6.1319;5.9964;5.8874 +;-;-;-;-;-;-;-;-;- + 1487 1 1.391 89439.5 1.0 12479 5025 17494 HBL1_DMSO_200M_050219_2,17506 HBL1_DMSO_200M_050219_2,17506,ELLKYLEEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17507 93.029 611.0 590160.0 25 0 37220.0 -1 0 146 926.933893010274 1851.853233087348 2 926.9365112185478 MULTI CID FTMS 0 0 0 17494 179066.71875 0.3120701647909495 -2 0.231353759765625 13 4 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}YQV 13 -1 72.349 0.0 0.0 3.9068 0.0 0.0 0.0 155.08075350298432 155.08075350298432 24.42344939730233 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 2.221848749616356 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}YQV 3.9068 - 8572 1 1.391 234348.1 1.0 12480 5025 17494 HBL1_DMSO_200M_050219_2,17507 HBL1_DMSO_200M_050219_2,17507, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17508 93.032 143.0 424720.0 25 0 32227.0 + 33455 SIFGEDALANV 11 87 568.2843464225681 1134.554139911936 2 568.2845947146416 MULTI CID FTMS 0 0 0 17494 172323.171875 0.401756859770258 2 -0.1950149536132812 14 Unmodified _SIFGEDALANV_ ENSG00000129083|ENST00000439561|COPB1 12.240655878213236 0.7805268987462184 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PM 4 9 16.198 0.0 0.0 1.4277 0.0 0.0 0.0 643.3571657755978 643.3571657755978 3.723637474483468 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PM 1.4277 - 136 + 1 1.391 53272.9 1.0 12481 5025 17494 HBL1_DMSO_200M_050219_2,17508 HBL1_DMSO_200M_050219_2,17508,SIFGEDALANV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17509 93.037 244.0 156360.0 25 0 19184.0 + 26717 NYQVQFVTL 9 68 556.2928425613079 1110.5711321894155 2 556.2931396365166 MULTI CID FTMS 0 0 0 17494 151155.0625 0.3619451866860892 1 -0.0923004150390625 15 Unmodified _NYQVQFVTL_ ENSG00000125484|ENST00000372146|GTF3C4 26.88365393820708 0.1891292719743517 4 {M(Oxidation (M))|F}QV[C(Carbamidomethyl (C))N]{I|L} 6 6 23.645 0.0 0.0 2.1291 0.0 0.0 331.2102445935157 0.0 331.2102445935157 0.0 17.191512336730028 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}QV[C(Carbamidomethyl (C))N]{I|L} 2.1291 - 92 + 1 1.391 37569.1 1.0 12482 5025 17494 HBL1_DMSO_200M_050219_2,17509 HBL1_DMSO_200M_050219_2,17509,NYQVQFVTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17510 93.051 800.0 183830.0 25 0 13498.0 + 29292 QIFNGTFVKL 10 164 583.8321631749548 1165.6497734167094 2 583.8331786990166 MULTI CID FTMS 0 0 0 17494 137871.734375 0.0089485454642634 6 -0.6329879760742188 16 Unmodified _QIFNGTFVKL_ ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF 47.594388314883695 0.0942698883389255 4 [Q{I|L}]{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}VK{I|L} 10 0 + 73.083 0.0 0.0 6.2698 6.2698 82.589 0.0 0.0 0.0 22.498774732166 5.790073891322123 5.790073891322123 5.790073891322123 0 0.3054621874040891 1.5228787452803376 0.0 0.9674165578762486 + + [Q{I|L}]{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}VK{I|L};[Q{I|L}]{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}V{I|L}K;[Q{I|L}]{M(Oxidation (M))|F}GGGT{M(Oxidation (M))|F}VK{I|L};[Q{I|L}]{M(Oxidation (M))|F}GGGT{M(Oxidation (M))|F}V{I|L}K;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QNGT{M(Oxidation (M))|F}VK{I|L};[Q{I|L}]{M(Oxidation (M))|F}NGT{M(Oxidation (M))|F}[K{I|L}]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QNGT{M(Oxidation (M))|F}V{I|L}K;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]NGT{M(Oxidation (M))|F}VK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QGGGT{M(Oxidation (M))|F}VK{I|L};[Q{I|L}]{M(Oxidation (M))|F}GGGT{M(Oxidation (M))|F}[K{I|L}]V 6.2698;5.773;5.4835;4.9868;4.2225;4.0955;3.7258;3.4363;3.4363;3.3093 +;-;-;-;-;-;-;-;-;- + 1463 + 1 1.391 111491.6 0.6100000143051147 12483 5025 17494 HBL1_DMSO_200M_050219_2,17510 HBL1_DMSO_200M_050219_2,17510,QIFNGTFVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17511 93.055 169.0 291990.0 25 0 35165.0 + 9714 RFLYSNIAF 9 82 565.3080515033486 1128.601550073497 2 565.8040038943291 MULTI CID FTMS 0 0 0 17494 127448.890625 0.1069610609463052 8 -0.9067535400390624 17 Unmodified _FLVTFGFIW_ nc|ENSG00000135476|Q14674-2|ESPL1;ENSG00000135476|ENST00000257934|ESPL1 8.593279151180031 0.6146971463335029 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RYSN{I|L}A 8 6 32.6 0.0 0.0 2.8885 0.0 0.0 0.0 161.06491338029676 161.06491338029676 11.630937864725157 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RYSN{I|L}A 2.8885 - 192 1 1.391 46365.1 1.0 12484 5025 17494 HBL1_DMSO_200M_050219_2,17511 HBL1_DMSO_200M_050219_2,17511,FLVTFGFIW False False RFLYSNIAF 93.055005 565.804003894329 1249897.625 17494.0 nc|ENSG00000135476|Q14674-2|ESPL1;;ENSG00000135476|ENST00000257934|ESPL1 6.631496429443359 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17512 93.068 758.0 180730.0 25 0 31620.0 -1 0 104 379.7500470459751 757.4855411587503 2 379.7495910525322 MULTI CID FTMS 0 0 0 17494 114793.328125 0.7564376667146125 -1 0.1043548583984375 18 4 {I|L}P{I|L}R{I|L}{M(Oxidation (M))|F} 6 -1 + 65.679 0.0 0.0 8.6707 8.6707 98.386 0.0 0.0 0.0 49.2919951248829 10.457574905606748 10.457574905606748 65.67918449261214 0 0.805462187404089 2.0 0.0 0.0 {I|L}P{I|L}R{I|L}{M(Oxidation (M))|F} 8.6707 - 41 + 1 1.391 116520.1 1.0 12485 5025 17494 HBL1_DMSO_200M_050219_2,17512 HBL1_DMSO_200M_050219_2,17512, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17513 93.075 404.0 207760.0 25 0 23862.0 + 29475 QLIPAVPGI 9 102 454.2839574945136 906.5533620558272 2 454.2837097048759 MULTI CID FTMS 0 0 0 17494 116814.484375 0.5561061891871466 -3 0.3538894653320312 19 Unmodified _QLIPAVPGI_ ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160 28.486842064014134 0.1687311288560894 4 [PG]{I|L}Q{I|L}{M(Oxidation (M))|F}P 7 7 27.51 0.0 0.0 3.0346 0.0 0.0 0.0 151.14842976506478 151.14842976506478 7.519123430258965 0.0 0.0 0.0 0 0.0 0.6575773191777937 0.0 0.0 [PG]{I|L}Q{I|L}{M(Oxidation (M))|F}P 3.0346 - 694 1 1.391 69661.9 1.0 12486 5025 17494 HBL1_DMSO_200M_050219_2,17513 HBL1_DMSO_200M_050219_2,17513,QLIPAVPGI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17514 93.081 294.0 327270.0 25 0 28067.0 + + -1 MQLEIKVAL 9 135 522.8102122222596 0 522.8100463747978 PEAK CID FTMS 0 0 0 17494 105041.3125 0.9817879856551764 -1 0.1043548583984375 20 Carbamidomethyl (C) _C(Carbamidomethyl (C))VLVQVLLT_ nc|ENSG00000183864|Q14106-2|TOB2;ENSG00000183864|ENST00000327492|TOB2 30.63653989081413 0.1077493867305487 4 G 1 -1 7.7423 0.0 0.0 0.74188 0.0 0.0 701.4150888958878 282.1462496393188 983.5613385352068 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 G 0.74188 - 353 + 1 1.391 79813.9 1.0 12487 5025 17494 HBL1_DMSO_200M_050219_2,17514 HBL1_DMSO_200M_050219_2,17514,CVLVQVLLT False False MQLEIKVAL 93.080728 522.810046374798 1255475.25 17494.0 nc|ENSG00000183864|Q14106-2|TOB2;;ENSG00000183864|ENST00000327492|TOB2 0.3454112311204274 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17516 93.086 88.0 562680.0 25 0 75679.0 + 29584 QLTEMLPSI 9 90 516.2752514603266 1030.535949987453 2 516.2759277224541 MULTI CID FTMS 0 0 0 17515 373527.96875 0.7048372438492931 1 -0.1027145385742187 1 Unmodified _QLTEMLPSI_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 37.97399986684836 0.0865783450051559 4 {[VA]|[{I|L}G]}AM{[ET]|[MV]}{I|L} 7 6 30.411 0.0 0.0 2.951 0.0 0.0 0.0 312.15958214981555 312.15958214981555 1.7089605114941977 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.9247425010840048 0.0 {[VA]|[{I|L}G]}AM{[ET]|[MV]}{I|L} 2.951 - 496 1 1.395 46379.8 1.0 12488 5026 17515 HBL1_DMSO_200M_050219_2,17516 HBL1_DMSO_200M_050219_2,17516,QLTEMLPSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17517 93.088 91.0 555100.0 25 0 71171.0 + 9889 FPFPTPPSV 9 81 494.7607277296627 987.5069025261254 2 494.7606994509697 MULTI CID FTMS 0 0 0 17515 362188.90625 0.9338414947593888 2 -0.2504653930664062 2 Unmodified _FPFPTPPSV_ ENSG00000150990|ENST00000308736|DHX37 46.92087301778293 0.0471210510596396 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PT 5 4 36.911 0.0 0.0 3.7378 0.0 0.0 0.0 395.193799043438 395.193799043438 14.294189257142929 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}PT 3.7378 + + 275 1 1.395 41375.1 1.0 12489 5026 17515 HBL1_DMSO_200M_050219_2,17517 HBL1_DMSO_200M_050219_2,17517,FPFPTPPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17518 93.09 85.0 748960.0 25 0 155200.0 + 12606 GVIQDFINA 9 93 488.7585917429328 975.5026305526656 2 488.7587768435478 MULTI CID FTMS 0 0 0 17515 563117.375 0.674565705947811 -1 0.0923004150390625 3 Unmodified _GVIQDFINA_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 34.10243960390752 0.1078313939113124 4 [VG]AE{M(Oxidation (M))|F}GV 7 6 32.668 0.0 0.0 3.3489 0.0 0.0 0.0 313.1506157423718 313.1506157423718 12.19273760456403 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.0 [VG]AE{M(Oxidation (M))|F}GV 3.3489 - 728 1 1.395 55128.5 1.0 12490 5026 17515 HBL1_DMSO_200M_050219_2,17518 HBL1_DMSO_200M_050219_2,17518,GVIQDFINA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17519 93.092 93.0 597310.0 25 0 64224.0 + 43930 YGIKDDVFLSV 11 65 628.3321161089559 1254.6496792847115 2 628.3325073122978 MULTI CID FTMS 0 0 0 17515 424242.03125 0.1501006210496679 -2 0.1966552734375 4 Unmodified _YGIKDDVFLSV_ ENSG00000134333|ENST00000422447|LDHA;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA 20.580933911654288 0.6070398941446662 4 [VS]{I|L}[YN]DV{M(Oxidation (M))|F}{I|L}SV 11 4 + 44.424 0.0 0.0 3.5408 3.5408 70.208 0.0 0.0 0.0 4.149733479708182 6.015293899681815 4.149733479708182 4.149733479708182 0 0.8182503180159344 1.3979400086720375 0.0 0.0 [VS]{I|L}[YN]DV{M(Oxidation (M))|F}{I|L}SV;{[TV]|[{I|L}S]}V[YN]DV{M(Oxidation (M))|F}{I|L}SV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[QT]DV{M(Oxidation (M))|F}{I|L}SV;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{M(Oxidation (M))|F}VSKQQCV;[{I|L}P][NG][Y{M(Oxidation (M))|F}]V{M(Oxidation (M))|F}{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[C(Carbamidomethyl (C))R]DV{M(Oxidation (M))|F}{I|L}SV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[QT]DV{M(Oxidation (M))|F}{I|L}SV;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[YG]{I|L}KQQCV;[VS][RD]{M(Oxidation (M))|F}S[RK]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 3.5408;3.21;2.6529;2.5042;2.0432;1.9797;1.9467;1.4896;0.42658 -;-;-;-;-;-;-;-;- 296 1 1.395 49815.1 1.0 12491 5026 17515 HBL1_DMSO_200M_050219_2,17519 HBL1_DMSO_200M_050219_2,17519,YGIKDDVFLSV False True YGIKDDVFLSV 93.092438 628.332507312298 79123032.0 17515.0 nc|ENSG00000134333|P00338-4|LDHA;;ENSG00000134333|ENST00000422447|LDHA;;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;;nc|ENSG00000134333|P00338-3|LDHA 5.871391296386719 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17520 93.095 125.0 476830.0 25 0 53770.0 + 4446 DAWQDGAVLQI 11 86 608.3037152256883 1214.5928775181765 2 608.3038818240166 MULTI CID FTMS 0 0 0 17515 359294.0 0.4955694294554774 -1 0.0923004150390625 5 Unmodified _DAWQDGAVLQI_ ENSG00000174840|ENST00000311180|PDE12;nc|ENSG00000174840|Q6L8Q7-2|PDE12 63.22749603027936 0.0560465731344335 4 [AG]WDQDAV 8 6 50.505 0.0 0.0 4.1582 0.0 0.0 0.0 369.21445218175535 369.21445218175535 24.11281813478716 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.7614393726401688 0.805462187404089 [AG]WDQDAV 4.1582 - 1175 1 1.395 47935.1 1.0 12492 5026 17515 HBL1_DMSO_200M_050219_2,17520 HBL1_DMSO_200M_050219_2,17520,DAWQDGAVLQI True True DAWQDGAVLQI 93.095028 608.303881824017 6288253.0 17515.0 nc|ENSG00000174840|Q6L8Q7-2|PDE12;;ENSG00000174840|ENST00000311180|PDE12 7.475348790486653 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17521 93.097 116.0 573120.0 25 0 54824.0 + 20974 LNLWRRSTL 9 86 579.8418157046 1157.669078476 2 579.3378173708916 MULTI CID FTMS 0 0 0 17515 339270.53125 0.7102861476544245 -4 0.4461898803710937 6 Unmodified _LNLWRRSTL_ REV__ENSG00000172340|ENST00000307227|SUCLG2;REV__nc|ENSG00000172340|Q96I99-2|SUCLG2 12.531546534597751 0.4974689918368763 4 {I|L}GP{M(Oxidation (M))|F}[{I|L}P] 6 -1 30.278 0.0 0.0 2.6154 0.0 0.0 515.3071141865755 0.0 515.3071141865755 0.0 1.939550558537768 0.0 0.0 0 0.1861818737241735 0.0 0.0 0.0 {I|L}GP{M(Oxidation (M))|F}[{I|L}P] 2.6154 - 117 1 1.395 57816.6 1.0 12493 5026 17515 HBL1_DMSO_200M_050219_2,17521 HBL1_DMSO_200M_050219_2,17521,LNLWRRSTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17522 93.101 200.0 527990.0 25 0 40419.0 + 5652 DPFAFIHKI 9 103 544.3004480669223 1086.5863432006445 2 544.3004638552666 MULTI CID FTMS 0 0 0 17515 324779.46875 0.0321912069184942 -5 0.561798095703125 7 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 78.7280429016045 0.0178249292250809 4 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L} 9 0 + 99.097 0.0 0.0 9.12 9.12 88.661 0.0 0.0 0.0 36.47817481888637 5.118833609788737 5.118833609788737 5.118833609788737 0 2.004432191740108 2.0 0.0 0.25 + + DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L};DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H{I|L}K;DP{I|L}HD{I|L}HK{I|L};DP{I|L}HD{I|L}H{I|L}K;D{I|L}MA{M(Oxidation (M))|F}{I|L}HK{I|L};D{I|L}MA{M(Oxidation (M))|F}{I|L}H{I|L}K;{[ET]|[MV]}EA{M(Oxidation (M))|F}{I|L}HK{I|L};D{I|L}PHD{I|L}HK{I|L};{[ET]|[MV]}EA{M(Oxidation (M))|F}{I|L}H{I|L}K;D{I|L}PHD{I|L}H{I|L}K 9.12;8.6489;7.3462;6.8751;6.4494;5.9783;4.8858;4.7448;4.4147;4.2737 +;-;-;-;-;-;-;-;-;- + 805 + 1 1.395 86375.5 1.0 12494 5026 17515 HBL1_DMSO_200M_050219_2,17522 HBL1_DMSO_200M_050219_2,17522,DPFAFIHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17523 93.103 82.0 716610.0 25 0 83691.0 + 13278 HIPDVITYL 9 92 535.7982331066675 1069.5819132801348 2 535.7977783083916 MULTI CID FTMS 0 0 0 17515 309123.5 0.1339091146360719 -10 1.0671310424804688 8 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 30.22481116460888 0.1466181017706357 4 [H{I|L}]V[DP]{I|L}TY{I|L} 9 2 + 41.321 0.0 0.0 3.8633 3.8633 73.851 0.0 0.0 0.0 6.478174818886366 8.384767769392738 6.478174818886366 6.478174818886366 0 0.6989700043360187 1.5228787452803376 0.5 0.0 [H{I|L}]V[DP]{I|L}TY{I|L};[DP]V{I|L}H{I|L}TY{I|L};[{I|L}P][DV]H{I|L}TY{I|L};[DP]V{I|L}T[H{I|L}]Y{I|L};[H{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[H{I|L}]Y{I|L};[{I|L}P][DV]T[H{I|L}]Y{I|L};[{I|L}P][VS]E[H{I|L}]Y{I|L};[{I|L}P][VS][H{I|L}]EY{I|L} 3.8633;3.2576;2.5757;1.5724;1.2707;0.89048;0.60903;0.54119 -;-;-;-;-;-;-;- 207 1 1.395 49933.9 1.0 12495 5026 17515 HBL1_DMSO_200M_050219_2,17523 HBL1_DMSO_200M_050219_2,17523,HIPDVITYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17524 93.113 537.0 281090.0 25 0 33314.0 -1 AQYACSLL 8 136 463.22659875397807 924.4386445747562 2 463.2269775271416 MULTI CID FTMS 0 0 0 17515 254550.84375 1.0 0 0.0 9 Carbamidomethyl (C) _AQYAC(Carbamidomethyl (C))SLL_ chr1:145917816-145918637|19|11.95|0.0|20.19|-|1|PEX11B,None|1;ENSG00000131779|ENST00000369306|PEX11B;nc|ENSG00000131779|O96011-2|PEX11B 10.183394434864962 0.7604730176254005 4 VGV{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5 -1 47.908 0.0 0.0 5.1824 0.0 0.0 0.0 372.14679895572505 372.14679895572505 31.71047361467689 0.0 0.0 0.0 0 0.2475310915719599 1.3979400086720375 0.0 0.0 VGV{M(Oxidation (M))|F}{M(Oxidation (M))|F} 5.1824 - 226 + 1 1.395 117461.1 1.0 12496 5026 17515 HBL1_DMSO_200M_050219_2,17524 HBL1_DMSO_200M_050219_2,17524,AQYACSLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17525 93.115 142.0 654620.0 25 0 79293.0 + 10569 FVIDLQTRL 9 79 552.8243666243062 1103.6341803154123 2 552.8245117068291 MULTI CID FTMS 0 0 0 17515 250067.0625 0.1690943369433745 -2 0.1966552734375 10 Unmodified _FVIDLQTRL_ ENSG00000131051|ENST00000253363|RBM39;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;nc|ENSG00000131051|Q14498-3|RBM39 57.72198328787511 0.0273433238377839 4 {M(Oxidation (M))|F}V{I|L}D{I|L}QTR{I|L} 9 0 + 75.131 0.0 0.0 6.8076 6.8076 80.75 0.0 0.0 0.0 58.17577761022491 10.36220550087016 10.36220550087016 3.0102999566398125 0 0.4247425010840047 0.0 1.274227503252014 0.3807196863200844 + + {M(Oxidation (M))|F}V{I|L}D{I|L}QTR{I|L};{M(Oxidation (M))|F}V{I|L}{I|L}DQTR{I|L};{M(Oxidation (M))|F}V{I|L}D{I|L}[AG]TR{I|L};{M(Oxidation (M))|F}V{I|L}{I|L}D[AG]TR{I|L} 6.8076;6.5348;5.9732;5.7005 +;-;-;- + 211 + 1 1.395 77778.8 1.0 12497 5026 17515 HBL1_DMSO_200M_050219_2,17525 HBL1_DMSO_200M_050219_2,17525,FVIDLQTRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17526 93.119 166.0 387780.0 25 0 43978.0 + 872 AEVDVNQKLLL 11 93 621.3575757175456 1240.7005985018911 2 621.3585082888603 MULTI CID FTMS 0 0 0 17515 267684.53125 0.004477615433976 12 -1.3698501586914062 11 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 22.65808497894818 0.560183898709508 4 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L} 12 -1 + 73.164 0.0 0.0 5.897 5.897 74.844 0.0 0.0 0.0 1.7609125905568137 9.634928107446186 1.7609125905568137 1.7609125905568137 0 2.3935078169319297 1.2218487496163564 0.0 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}W{I|L}{I|L};{[VA]|[{I|L}G]}EDVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}AD{I|L}G{I|L}{I|L}EG{I|L}{I|L};{[VA]|[{I|L}G]}EDVA{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}{I|L}W{I|L}{I|L};{[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}{I|L} 5.897;5.755;5.6067;5.4647;5.3577;5.2981;5.1561;5.0675;5.0078;4.9387 -;-;-;-;-;-;-;-;-;- 2922 1 1.395 54802.2 1.0 12498 5026 17515 HBL1_DMSO_200M_050219_2,17526 HBL1_DMSO_200M_050219_2,17526,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17527 93.123 237.0 232430.0 25 0 14291.0 -1 0 83 939.9568481034072 1877.899143273614 2 939.9592773318292 MULTI CID FTMS 0 0 0 17515 242566.265625 1.0 0 0.0 12 4 [{I|L}T]{[MS]|[{M(Oxidation (M))|F}A]}V[NG]T{M(Oxidation (M))|F} 9 -1 33.134 0.0 0.0 1.7644 0.0 0.0 0.0 924.3661593072874 924.3661593072874 5.870827893812425 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}T]{[MS]|[{M(Oxidation (M))|F}A]}V[NG]T{M(Oxidation (M))|F} 1.7644 - 396 + 1 1.395 43686.6 1.0 12499 5026 17515 HBL1_DMSO_200M_050219_2,17527 HBL1_DMSO_200M_050219_2,17527, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17528 93.137 800.0 247150.0 25 0 27637.0 + 37559 TLIDLPGITRV 11 139 599.3635993496121 1196.712645766024 2 599.3639404177666 MULTI CID FTMS 0 0 0 17515 187290.09375 1.0 0 0.0 13 Unmodified _TLIDLPGITRV_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 46.0223103267499 0.1396584557920269 4 [{I|L}T]{I|L}D{I|L}VAPRS{I|L} 11 6 + 73.349 0.0 0.0 6.1292 6.1292 76.872 0.0 0.0 0.0 53.83696917821883 5.39356300993019 5.39356300993019 2.346368802282015 0 1.548455006504028 2.0 0.9163865622122672 0.3494850021680094 [{I|L}T]{I|L}D{I|L}VAPRS{I|L};[{I|L}T]{I|L}D{I|L}P{[VA]|[{I|L}G]}RS{I|L};[{I|L}T]{I|L}D{I|L}VAPRTV;[{I|L}T]VE{I|L}VAPRS{I|L};[{I|L}T]{I|L}D{I|L}P{[VA]|[{I|L}G]}RTV;[{I|L}T]VE{I|L}P{[VA]|[{I|L}G]}RS{I|L};[{I|L}T]{I|L}[WK]{I|L}EVPV;[{I|L}T]VE{I|L}VAPRTV;[{I|L}T]{I|L}[WK]{I|L}D{I|L}PV;[{I|L}T]VE{I|L}[WK]{I|L}PV 6.1292;5.9331;5.6672;5.5856;5.4712;5.3896;5.2687;5.1237;5.1024;4.9885 -;-;-;-;-;-;-;-;-;- 2619 + 1 1.395 146475.9 0.7099999785423279 12500 5026 17515 HBL1_DMSO_200M_050219_2,17528 HBL1_DMSO_200M_050219_2,17528,TLIDLPGITRV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17529 93.146 493.0 247190.0 25 0 21838.0 + 18727 LALDHAAEEWH 11 136 646.3078699143236 1290.6011868954472 2 646.8134033083916 MULTI CID FTMS 0 0 0 17515 190270.25 1.0 0 0.0 14 Unmodified _LALDHAAEEWH_ REV__ENSG00000100380|ENST00000216218|ST13;REV__nc|ENSG00000232150|Q8IZP2|ST13P4 13.90604991867851 0.7458848613461305 4 [{I|L}A]GED{I|L}[MD]{M(Oxidation (M))|F}{I|L}[PA] 12 -1 + 42.256 0.0 0.0 3.2741 3.2741 76.507 0.0 0.0 0.0 9.400853713289209 6.505149978319899 6.505149978319899 9.400853713289209 0 0.5 1.6989700043360187 0.899649864804614 0.0 [{I|L}A]GED{I|L}[MD]{M(Oxidation (M))|F}{I|L}[PA];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}{I|L}[MD]{M(Oxidation (M))|F}{I|L}[PA];[{I|L}A]GEDA[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}{I|L}[PA];{[QN]|[E{I|L}]|[KN]}QD{I|L}[MD]{M(Oxidation (M))|F}{I|L}[PA];[Q{I|L}]ED{I|L}[MD]{M(Oxidation (M))|F}{I|L}[PA];W{I|L}{M(Oxidation (M))|F}[MD]{I|L}D[PS][PA];[{I|L}A]{I|L}D{[DA]|[EG]}[MD]{M(Oxidation (M))|F}{I|L}[PA];{NN|[MP]|[D{I|L}]|[EV]}AAD{I|L}[MD]{M(Oxidation (M))|F}{I|L}[PA];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[AG]{I|L}{I|L}[MD]{M(Oxidation (M))|F}{I|L}[PA];[{I|L}A]GEW[C(Carbamidomethyl (C))Q]{M(Oxidation (M))|F}{I|L}[PA] 3.2741;2.5457;2.5443;2.461;2.2684;2.2639;2.1227;1.8662;1.8384;1.8294 -;-;-;-;-;-;-;-;-;- 2451 1 1.395 96270.7 1.0 12501 5026 17515 HBL1_DMSO_200M_050219_2,17529 HBL1_DMSO_200M_050219_2,17529,LALDHAAEEWH False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17530 93.149 172.0 365030.0 25 0 35193.0 + 19536 IFPMPRVIY 9 77 568.321174530099 1134.627796126998 2 568.3196288943291 MULTI CID FTMS 0 0 0 17515 182896.90625 0.8883084410612223 -2 0.1966552734375 15 Unmodified _LFPMPRVIY_ nc|ENSG00000003989|P52569-3|SLC7A2;ENSG00000003989|ENST00000494857|SLC7A2 16.942295170755138 0.3780752226737986 4 MP{[QN]|[E{I|L}]|[KN]} 4 6 20.005 0.0 0.0 1.7631 0.0 0.0 646.3811388720115 0.0 646.3811388720115 0.0 7.240874602795877 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 MP{[QN]|[E{I|L}]|[KN]} 1.7631 - 27 1 1.395 54024.8 1.0 12502 5026 17515 HBL1_DMSO_200M_050219_2,17530 HBL1_DMSO_200M_050219_2,17530,LFPMPRVIY False True IFPMPRVIY 93.149096 568.319628894329 23388344.0 17515.0 nc|ENSG00000003989|P52569-3|SLC7A2;;ENSG00000003989|ENST00000494857|SLC7A2 7.06617800394694 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17531 93.154 209.0 530330.0 25 0 66836.0 + 3118 AVPEIMPEL 9 116 499.7654738053569 997.516394677514 2 499.7657958865166 MULTI CID FTMS 0 0 0 17515 172207.921875 0.3160209287711363 -2 0.1966552734375 16 Unmodified _AVPEIMPEL_ ENSG00000169288|ENST00000315567|MRPL1;ENST00000506674.1_1_4:78804483-78828134:+|nuORF 50.855029805455786 0.0384952370514206 4 [EP]{I|L}MPE 6 3 43.645 0.0 0.0 4.3754 0.0 0.0 0.0 298.17524412503263 298.17524412503263 5.239763491395564 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + [EP]{I|L}MPE 4.3754 + + 724 1 1.395 88594.1 1.0 12503 5026 17515 HBL1_DMSO_200M_050219_2,17531 HBL1_DMSO_200M_050219_2,17531,AVPEIMPEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17532 93.163 514.0 210190.0 25 0 45141.0 + 27649 PLGSPLLL 8 109 405.2602548229989 808.5059567127978 2 405.2604858279228 MULTI CID FTMS 0 0 0 17515 157979.34375 0.7953007250438034 8 -0.9579849243164062 17 Unmodified _PLGSPLLL_ ENST00000537708.1_1_12:6669555-6669804:-|nuORF 59.79521254764295 0.1151759508933577 4 [{I|L}P][SG]P{I|L}{I|L}{I|L} 8 0 + 55.679 0.0 0.0 6.8867 6.8867 81.654 0.0 0.0 0.0 9.947274948966935 32.2062251842808 9.947274948966935 3.252574989159953 0 0.7742275032520141 1.6989700043360187 1.031234684152075 0.0 + + [{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L};{[TV]|[{I|L}S]}[PG]P{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[PG]{I|L}P{I|L}{I|L} 6.8867;6.4844;3.5485;3.1462 +;-;-;- + 142 1 1.395 89136.6 1.0 12504 5026 17515 HBL1_DMSO_200M_050219_2,17532 HBL1_DMSO_200M_050219_2,17532,PLGSPLLL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17533 93.167 183.0 409520.0 25 0 42688.0 + 4519 DAYLPLRL 8 95 480.77953309405433 959.5445132549088 2 480.7771789431572 MULTI CID FTMS 0 0 0 17515 151441.484375 0.0066870563532197 8 -0.9579849243164062 18 Unmodified _DAYLPLRL_ ENSG00000062822|ENST00000440232|POLD1 30.22481116460888 0.4082965392918993 4 {[DA]|[EG]}Y{I|L}{I|L}[RP]{I|L} 8 2 + 46.956 0.0 0.0 4.8935 4.8935 75.821 0.0 0.0 0.0 34.96584697476848 4.737059521965108 4.737059521965108 4.771212547196626 0 0.8494850021680094 1.3010299956639813 0.0 0.3054621874040891 {[DA]|[EG]}Y{I|L}{I|L}[RP]{I|L};{[DA]|[EG]}Y{I|L}{I|L}[R{I|L}]P;{[HG]|PP}[HM]{I|L}[RP]{I|L};[Q{I|L}]KKQ[C(Carbamidomethyl (C))R];{[HG]|PP}[HM]{I|L}[R{I|L}]P 4.8935;4.3963;0.51471;0.39163;0.017473 -;-;-;-;- 101 + 1 1.395 63614.5 1.0 12505 5026 17515 HBL1_DMSO_200M_050219_2,17533 HBL1_DMSO_200M_050219_2,17533,DAYLPLRL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17534 93.181 800.0 111260.0 25 0 17098.0 15238 IPFTSSVP 8 103 424.23352907926807 846.4525052253362 2 424.2337829470634 MULTI CID FTMS 0 0 0 17515 124654.765625 0.4393531749895474 8 -0.9579849243164062 19 Unmodified _IPFTSSVP_ ENSG00000123636|ENST00000392783|BAZ2B;nc|ENSG00000226266|Q9UIF8-2|BAZ2B;nc|ENSG00000226266|Q9UIF8-3|BAZ2B;nc|ENSG00000226266|Q9UIF8-4|BAZ2B;nc|ENSG00000226266|Q9UIF8-5|BAZ2B 5.760428011301431 0.7893668129297577 4 {I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QPV 7 5 + 22.381 0.0 0.0 2.6441 2.6441 75.172 0.0 0.0 0.0 12.62741287037698 1.412222626945507 1.412222626945507 9.33053210369387 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QPV;{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[AG]PV;{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[NP]{I|L} 2.6441;1.5418;1.0047 -;-;- 55 + 1 1.395 74996.8 0.4699999988079071 12506 5026 17515 HBL1_DMSO_200M_050219_2,17534 HBL1_DMSO_200M_050219_2,17534,IPFTSSVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17535 93.184 147.0 549750.0 25 0 65783.0 + 1935 AMIRLLSI 8 85 458.78603457681976 915.5575162204397 2 458.7862426638603 MULTI CID FTMS 0 0 0 17515 110454.578125 0.1078249894555899 -2 0.1966552734375 20 Unmodified _AMIRLLSI_ REV__L1PA10_dup4980|chr11:35097301-35097836:+|1.220344252307297|0.0480148522199164|4.67|48.0|18|1|anti-sense 81.61307344734483 0.0848032199178113 4 {[DS]|[MA]|[CV]|TT}{I|L}R{I|L}{I|L}S{I|L} 8 -1 + 54.804 0.0 0.0 5.9858 5.9858 90.886 0.0 0.0 0.0 15.278193816289232 25.85138771613167 15.278193816289232 54.80381264341851 0 1.1989700043360187 1.5228787452803376 0.4247425010840047 0.3494850021680094 {[DS]|[MA]|[CV]|TT}{I|L}R{I|L}{I|L}S{I|L} 5.9858 + + 37 1 1.395 66894.6 1.0 12507 5026 17515 HBL1_DMSO_200M_050219_2,17535 HBL1_DMSO_200M_050219_2,17535,AMIRLLSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17537 93.188 21.0 2579100.0 25 0 256800.0 + 4555 DAYQVLSTL 9 78 505.2640395103344 1008.5135260874688 2 505.2640563845634 MULTI CID FTMS 0 0 0 17536 2904609.5 1.0 0 0.0 1 Unmodified _DAYQVLSTL_ ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2 43.85829265575387 0.0542763391141878 4 {[DA]|[EG]}YQV 5 4 32.224 0.0 0.0 3.1952 0.0 0.0 0.0 429.2355469217063 429.2355469217063 5.0565842292838425 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.3807196863200844 + {[DA]|[EG]}YQV 3.1952 + + 232 1 1.395 48761.8 1.0 12508 5027 17536 HBL1_DMSO_200M_050219_2,17537 HBL1_DMSO_200M_050219_2,17537,DAYQVLSTL True True DAYQVLSTL 93.188167 505.264056384563 44928588.0 17536.0 ENSG00000101972|ENST00000371145|STAG2;;nc|ENSG00000101972|Q8N3U4|STAG2 6.321262359619141 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17538 93.19 60.0 1332900.0 25 0 305740.0 + 43936 YGIPAIVKL 9 72 487.3068622324066 972.5991715316133 2 487.3080627322197 MULTI CID FTMS 0 0 0 17536 973840.875 0.9736303274416908 1 -0.1477508544921875 2 Unmodified _YGIPAIVKL_ ENSG00000173801|ENST00000393931|JUP;ENST00000585793.1_1_17:39914605-39919321:-|nuORF 39.957323273325 0.0756908302845263 4 YG{I|L}PA{I|L}VK{I|L} 9 0 + 51.767 0.0 0.0 5.3226 5.3226 84.797 0.0 0.0 0.0 18.536074819046995 12.05136871872881 12.05136871872881 12.060544824331233 0 0.718765315847925 1.0969100130080565 0.0 0.0 + + YG{I|L}PA{I|L}VK{I|L};YG{I|L}PA{I|L}[K{I|L}]V 5.3226;4.0825 +;- + 87 + 1 1.395 65109.9 1.0 12509 5027 17536 HBL1_DMSO_200M_050219_2,17538 HBL1_DMSO_200M_050219_2,17538,YGIPAIVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17539 93.191 65.0 1335600.0 25 0 108950.0 + 3189 AVVPKIFYV 9 113 518.315547115463 1034.616541297726 2 518.3157226443291 MULTI CID FTMS 0 0 0 17536 639371.75 0.997987527921599 -1 0.1027145385742187 3 Unmodified _AVVPKIFYV_ ENSG00000154217|ENST00000581322|PITPNC1;ENST00000581923.5_1_17:65529052-65574345:+|nuORF;nc|ENSG00000154217|Q9UKF7-2|PITPNC1 30.22481116460888 0.1466181017706357 4 {[VA]|[{I|L}G]}V{M(Oxidation (M))|F} 4 5 34.654 0.0 0.0 3.3494 0.0 0.0 0.0 615.350677610479 615.350677610479 8.278324880759484 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}V{M(Oxidation (M))|F} 3.3494 - 393 1 1.395 73896.4 1.0 12510 5027 17536 HBL1_DMSO_200M_050219_2,17539 HBL1_DMSO_200M_050219_2,17539,AVVPKIFYV False True AVVPKIFYV 93.191231 518.315722644329 5883767.0 17536.0 nc|ENSG00000154217|Q9UKF7-2|PITPNC1;;ENST00000581923.5_1_17:65529052-65574345:+|nuORF;;ENSG00000154217|ENST00000581322|PITPNC1 5.235298951466878 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17540 93.194 114.0 926200.0 25 0 115630.0 + 4527 DAYLVHLI 8 106 472.2661549896553 942.5177570461108 2 472.2658874392509 MULTI CID FTMS 0 0 0 17536 490803.46875 0.1790899440776627 -3 0.2993698120117187 4 Unmodified _DAYLVHLI_ ENSG00000105671|ENST00000247003|DDX49;ENST00000595858.5_1_19:19032475-19037138:+|nuORF;ENST00000601803.5_1_19:19032987-19035509:+|nuORF;nc|ENSG00000105671|Q9Y6V7-2|DDX49 36.46614268402704 0.2934124525509074 4 [H{I|L}]VY{I|L} 5 5 29.252 0.0 0.0 3.1036 0.0 0.0 0.0 314.13425395443807 314.13425395443807 0.0561319334202892 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [H{I|L}]VY{I|L} 3.1036 - 145 1 1.395 85204.0 1.0 12511 5027 17536 HBL1_DMSO_200M_050219_2,17540 HBL1_DMSO_200M_050219_2,17540,DAYLVHLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17541 93.197 201.0 345640.0 25 0 33906.0 + -1 AECSGPLSCSL 11 104 590.7538990044483 1179.4932450756964 2 590.7546264529228 MULTI CID FTMS 0 0 0 17536 309778.53125 0.6431974636787818 1 -0.1477508544921875 5 2 Carbamidomethyl (C) _AEC(Carbamidomethyl (C))SGPLSC(Carbamidomethyl (C))SL_ REV__ENSG00000254415|ENST00000360844|SIGLEC14;REV__nc|ENSG00000268500|O15389|SIGLEC5 13.042465956692816 0.7638483625850725 4 {[QS]|[NT]}YS 4 -1 29.097 0.0 0.0 2.4669 0.0 0.0 0.0 711.2849375407933 711.2849375407933 11.913315796783325 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.5843105420796064 0.5629529932484498 {[QS]|[NT]}YS 2.4669 - 277 1 1.395 58308.3 1.0 12512 5027 17536 HBL1_DMSO_200M_050219_2,17541 HBL1_DMSO_200M_050219_2,17541,AECSGPLSCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17542 93.202 264.0 418300.0 25 0 59830.0 + 28272 PRHGGCMT 8 107 429.69040911463 857.3662652960601 2 429.6906616091728 MULTI CID FTMS 0 0 0 17536 245140.265625 1.0 0 0.0 6 Unmodified _PRHGGCMT_ REV__nc|ENSG00000078319|A4D2B8-2|PMS2P1;REV__nc|ENSG00000078319|A4D2B8-3|PMS2P1;REV__nc|ENSG00000078319|A4D2B8|PMS2P1 9.347437153973935 0.7675937258251505 4 {[YD]|[{M(Oxidation (M))|F}M]}{I|L} 3 -1 31.937 0.0 0.0 3.725 0.0 0.0 0.0 463.1677844213132 463.1677844213132 3.8772686722014527 0.0 0.0 0.0 0 0.5 2.0 0.25 0.0 {[YD]|[{M(Oxidation (M))|F}M]}{I|L} 3.725 - 62 1 1.395 89812.2 1.0 12513 5027 17536 HBL1_DMSO_200M_050219_2,17542 HBL1_DMSO_200M_050219_2,17542,PRHGGCMT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17543 93.205 144.0 450920.0 25 0 44174.0 + 24122 LYMLTEYL 8 105 523.2694526492991 1044.524352365398 2 523.2684203982353 MULTI CID FTMS 0 0 0 17536 192694.796875 1.0 0 0.0 7 Unmodified _LYMLTEYL_ REV__ENSG00000182783|ENST00000641069|OR2T29;REV__ENSG00000203661|ENST00000641363|OR2T5 19.438996006549623 0.6237395211498085 4 {I|L}Y{M(Oxidation (M))|F}V{I|L}[YE]V 8 -1 + 62.401 0.0 0.0 5.9741 5.9741 80.412 0.0 0.0 0.0 50.18237211568909 3.645162531850872 3.645162531850872 4.771212547196626 0 0.3807196863200844 2.0 0.0 0.0 {I|L}Y{M(Oxidation (M))|F}V{I|L}[YE]V;{I|L}YPVDDGAPV;{I|L}YPVDDQPV;{I|L}Y{M(Oxidation (M))|F}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L};{I|L}Y{M(Oxidation (M))|F}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F};{I|L}YPVDDG[PG]{I|L};{I|L}YPV{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L};{I|L}YPV{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}{M(Oxidation (M))|F};{I|L}YPVDD[NP]{I|L};{I|L}YP[WK][HC]V 5.9741;5.5173;5.1801;4.9409;4.7082;4.6357;4.5599;4.3273;4.2986;3.8908 -;-;-;-;-;-;-;-;-;- 433 + 1 1.395 55459.1 1.0 12514 5027 17536 HBL1_DMSO_200M_050219_2,17543 HBL1_DMSO_200M_050219_2,17543,LYMLTEYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17544 93.21 244.0 322010.0 25 0 28925.0 + 20340 VVPPFLQPEV 10 101 562.821935292055 1123.6293176509098 2 562.8238403201103 MULTI CID FTMS 0 0 0 17536 191151.859375 0.6789630396753512 -1 0.1027145385742187 8 Unmodified _LLFLFFPEV_ P02666 20.41453444215458 0.284085796332423 4 VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VQ{I|L}[HS]V 10 8 + 52.197 0.0 0.0 4.6454 4.6454 75.447 0.0 0.0 0.0 18.551141956902136 7.403405327429411 7.403405327429411 5.3246091534035145 0 0.3054621874040891 2.0 0.0 0.4247425010840047 VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VQ{I|L}[HS]V;{I|L}{[ET]|[MV]}VVQ{I|L}[HS]V;{I|L}{M(Oxidation (M))|F}{I|L}[PA]Q{I|L}[HS]V;VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VQ[HV]TV;{I|L}{[ET]|[MV]}VVQ[HV]TV;VV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VQ[HV]S{I|L};{I|L}{M(Oxidation (M))|F}{I|L}[PA]Q[HV]TV;{I|L}{[ET]|[MV]}VVQ[HV]S{I|L};{I|L}{M(Oxidation (M))|F}{I|L}[KG]{I|L}WT{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}{I|L}[PA]Q[HV]S{I|L} 4.6454;4.1715;3.9835;3.7014;3.2275;3.1346;3.0395;2.6607;2.5745;2.4727 -;-;-;-;-;-;-;-;-;- 541 + 1 1.395 70631.6 1.0 12515 5027 17536 HBL1_DMSO_200M_050219_2,17544 HBL1_DMSO_200M_050219_2,17544,LLFLFFPEV False False VVPPFLQPEV 93.209802 562.82384032011 2952933.0 17536.0 P02666 5.323493321736653 2.0 False 10.0 True unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17545 93.218 457.0 278970.0 25 0 17970.0 -1 0 125 1069.5042206349146 2136.9938883366294 2 1070.005664050579 MULTI CID FTMS 0 0 0 17536 171462.890625 1.0 0 0.0 9 4 {[TV]|[{I|L}S]}EA{I|L}TQYYYY 11 -1 79.205 0.0 0.0 3.7064 0.0 0.0 0.0 739.3633485272106 739.3633485272106 57.68337581601007 0.0 0.0 0.0 0 0.0 1.5228787452803376 2.628144697160131 0.3494850021680094 {[TV]|[{I|L}S]}EA{I|L}TQYYYY 3.7064 - 34231 1 1.395 81990.3 1.0 12516 5027 17536 HBL1_DMSO_200M_050219_2,17545 HBL1_DMSO_200M_050219_2,17545, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17546 93.232 800.0 436050.0 25 0 124930.0 + 17217 KLLEYIEEI 9 116 1149.6398633324875 1148.6325868658878 1 1149.638842761517 MULTI CID FTMS 0 0 0 17536 156414.5625 1.0 0 0.0 10 Unmodified _KLLEYIEEI_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 104.48436234954404 0.008620177265826 4 [K{I|L}]{I|L}EY{I|L}EE{I|L} 9 0 + 94.446 0.0 0.0 8.2224 8.2224 81.003 0.0 0.0 0.0 1.2937092834841053 16.478174818886373 1.2937092834841053 1.2937092834841053 0 1.4720499982754136 0.744727494896694 1.9731975075880328 0.7931576817365437 + + [K{I|L}]{I|L}EY{I|L}EE{I|L};{I|L}{I|L}KEY{I|L}EE{I|L};{I|L}{I|L}EKY{I|L}EE{I|L};[K{I|L}]{I|L}EYE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KY{I|L}EE{I|L};{I|L}{I|L}KEYE{I|L}E{I|L};[K{I|L}]{I|L}YE{I|L}EE{I|L};{I|L}{I|L}KYE{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L};{I|L}{I|L}EYK{I|L}EE{I|L} 8.2224;8.1098;7.4591;7.0583;7.0039;6.9457;6.7234;6.6108;6.5326;6.3755 +;-;-;-;-;-;-;-;-;- + 5291 1 1.395 216708.4 0.6399999856948853 12517 5027 17536 HBL1_DMSO_200M_050219_2,17546 HBL1_DMSO_200M_050219_2,17546,KLLEYIEEI True True KLLEYIEEI 93.231821 1149.63884276152 63857847.375 17536.0 nc|ENSG00000072571|O75330|HMMR;;nc|ENSG00000072571|O75330-2|HMMR;;nc|ENSG00000072571|O75330-4|HMMR;;ENSG00000072571|ENST00000393915|HMMR 4.637691895167033 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17547 93.246 800.0 123450.0 25 0 29957.0 -1 EKEMWHRMFAP 11 114 739.3383104894963 1476.6620680457925 2 739.3373290896416 MULTI CID FTMS 0 0 0 17536 112003.0078125 0.8882730474054059 3 -0.3552017211914062 11 Oxidation (M) _EKEM(Oxidation (M))WHRMFAP_ ENSG00000077800|ENST00000252037|FKBP6;nc|ENSG00000077800|O75344-2|FKBP6;nc|ENSG00000077800|O75344-3|FKBP6 4.897010918128616 0.8520435188433833 4 [DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}][VS]{M(Oxidation (M))|F}{I|L}{I|L}SYQ 12 -1 + 59.179 0.0 0.0 4.0076 4.0076 70.482 0.0 0.0 0.0 15.251218656855698 4.436974992327123 4.436974992327123 3.4415735661896107 0 0.0 2.0 1.0356668758921828 0.1989700043360188 [DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}][VS]{M(Oxidation (M))|F}{I|L}{I|L}SYQ;W{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))M]{[ET]|[MV]}{I|L}SYQ;W{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M]{[ET]|[MV]}{I|L}SYQ;[VS]{M(Oxidation (M))|F}{I|L}E[YC(Carbamidomethyl (C))]S{I|L}[MT]Q;[VS]{M(Oxidation (M))|F}{[SA]|[TG]}S[YC(Carbamidomethyl (C))]E{M(Oxidation (M))|F}{I|L}[PA];[VS]{M(Oxidation (M))|F}{I|L}E[YC(Carbamidomethyl (C))]S{I|L}[C(Carbamidomethyl (C))S]{I|L};[VS]{M(Oxidation (M))|F}{[SA]|[TG]}S[YC(Carbamidomethyl (C))]E{I|L}{M(Oxidation (M))|F}[PA];{[TV]|[{I|L}S]}[YQ]S[YC(Carbamidomethyl (C))]E{I|L}{M(Oxidation (M))|F}[PA];[VS]{M(Oxidation (M))|F}E[YC(Carbamidomethyl (C))]{I|L}S{I|L}[MT]Q;[VS]{M(Oxidation (M))|F}E{I|L}[YC(Carbamidomethyl (C))]S{I|L}[MT]Q 4.0076;3.7746;3.2321;2.2195;2.1102;2.0568;1.9754;1.9512;1.7954;1.779 -;-;-;-;-;-;-;-;-;- 766 + 1 1.395 75598.3 0.5699999928474426 12518 5027 17536 HBL1_DMSO_200M_050219_2,17547 HBL1_DMSO_200M_050219_2,17547,EKEMWHRMFAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17548 93.26 800.0 144480.0 25 0 34957.0 -1 0 95 1086.8603700455958 3257.559280736988 3 1087.531298816204 MULTI CID FTMS 0 0 0 17536 109547.0390625 0.2893497296558885 -3 0.2993698120117187 12 4 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L} 6 -1 21.872 0.0 0.0 0.67142 0.0 0.0 2170.9675979565245 393.22666345767817 2564.194261414202 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L} 0.67142 - 290 + 1 1.395 79666.5 0.6000000238418579 12519 5027 17536 HBL1_DMSO_200M_050219_2,17548 HBL1_DMSO_200M_050219_2,17548, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17549 93.275 800.0 82082.0 25 0 7733.2 + 32050 RVLDLSENFL 10 117 603.3301728407426 1204.6457927482852 2 603.3312866091728 MULTI CID FTMS 0 0 0 17536 99578.421875 0.2729411187289042 2 -0.256378173828125 13 Unmodified _RVLDLSENFL_ ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9 23.015651743759182 0.4515786786615758 4 {NN|[MP]|[D{I|L}]|[EV]}[RV]{I|L}SEN{M(Oxidation (M))|F}{I|L} 10 3 + 68.123 0.0 0.0 5.655 5.655 83.505 0.0 0.0 0.0 11.29416157934763 57.15350013324773 11.29416157934763 9.164539485499256 0 0.75 1.6989700043360187 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}[RV]{I|L}SEN{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]{I|L}SEGG{M(Oxidation (M))|F}{I|L};[{I|L}A][W{I|L}]{I|L}SEN{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]{I|L}SEN{M(Oxidation (M))|F}{I|L};[{I|L}A][W{I|L}]{I|L}SEGG{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]{I|L}SEN{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]{I|L}SEGG{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]{I|L}SEGG{M(Oxidation (M))|F}{I|L} 5.655;4.8942;4.3863;4.0985;3.6256;3.5562;3.3377;2.7955 -;-;-;-;-;-;-;- 200 1 1.395 49121.9 0.6100000143051147 12520 5027 17536 HBL1_DMSO_200M_050219_2,17549 HBL1_DMSO_200M_050219_2,17549,RVLDLSENFL False True RVLDLSENFL 93.274829 603.331286609173 6025703.5 17536.0 nc|ENSG00000239732|Q9NR96-3|TLR9;;nc|ENSG00000239732|Q9NR96-4|TLR9;;nc|ENSG00000239732|Q9NR96-5|TLR9;;nc|ENSG00000239732|Q9NR96-2|TLR9;;ENSG00000239732|ENST00000360658|TLR9 6.731439590454102 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17550 93.289 800.0 189110.0 25 0 35867.0 + 22443 LPTPRLLHYMI 11 133 677.3876851270641 0 677.3877441287041 PEAK CID FTMS 0 0 0 17536 90578.4375 1.0 0 0.0 14 Unmodified _LPTPRLLHYMI_ REV__ENST00000471115.5_1_1:85724305-85725048:-|nuORF 18.1463463914782 0.3750318954284983 4 EVK{I|L}{[C(Carbamidomethyl (C))G]|[NC]}PK{I|L}P 10 -1 39.645 0.0 0.0 2.9307 0.0 0.0 130.07627466299442 98.02542291812732 228.10169758112173 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.610924374808178 EVK{I|L}{[C(Carbamidomethyl (C))G]|[NC]}PK{I|L}P 2.9307 - 1120 + 1 1.395 112356.2 0.5899999737739563 12521 5027 17536 HBL1_DMSO_200M_050219_2,17550 HBL1_DMSO_200M_050219_2,17550,LPTPRLLHYMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17551 93.304 800.0 294900.0 25 0 17304.0 + 44583 YPFINSRIITV 11 147 661.8768817256396 1321.739210518079 2 661.8766967654228 MULTI CID FTMS 0 0 0 17536 94932.984375 0.0465107714149268 -5 0.5489044189453125 15 Unmodified _YPFINSRIITV_ ENSG00000037474|ENST00000264670|NSUN2;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 112.04118876639724 0.016203247773655 4 YP{M(Oxidation (M))|F}{I|L}NSR{I|L}{I|L}S{I|L} 11 2 + 116.52 0.0 0.0 8.8154 8.8154 92.044 0.0 0.0 0.0 48.465285049249786 12.060323256818208 12.060323256818208 9.128498242810991 0 2.761922997584469 2.0 1.385151878060192 0.2887254899964357 YP{M(Oxidation (M))|F}{I|L}NSR{I|L}{I|L}S{I|L};YP{M(Oxidation (M))|F}{I|L}GGSR{I|L}{I|L}S{I|L};YP{M(Oxidation (M))|F}{I|L}NRS{I|L}{I|L}S{I|L};YP{M(Oxidation (M))|F}VQSR{I|L}{I|L}S{I|L};YP{M(Oxidation (M))|F}{I|L}NSR{I|L}VT{I|L};YP{M(Oxidation (M))|F}{I|L}GGRS{I|L}{I|L}S{I|L};YP{M(Oxidation (M))|F}V[AG]SR{I|L}{I|L}S{I|L};YP{M(Oxidation (M))|F}VQRS{I|L}{I|L}S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}PP{I|L}Y{I|L}TV;YP{M(Oxidation (M))|F}VNTR{I|L}{I|L}S{I|L} 8.8154;8.1248;8.0935;8.0386;7.8065;7.4028;7.3479;7.3166;7.216;7.1808 -;-;-;-;-;-;-;-;-;- 5078 + 1 1.395 173361.4 0.6000000238418579 12522 5027 17536 HBL1_DMSO_200M_050219_2,17551 HBL1_DMSO_200M_050219_2,17551,YPFINSRIITV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17552 93.318 800.0 66421.0 25 0 4483.6 + 10811 FYVDSDMVNEF 11 110 683.2865319804339 1364.5585110276677 2 683.2878906130791 MULTI CID FTMS 0 0 0 17536 90491.5625 0.4702147755225517 2 -0.256378173828125 16 Unmodified _FYVDSDMVNEF_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 9.38312468134398 0.8308777417566128 4 {M(Oxidation (M))|F} 1 10 14.604 0.0 0.0 1.0702 0.0 0.0 1199.4790412784473 0.0 1199.4790412784473 0.0 2.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0702 + + 125 + 1 1.395 44092.6 0.5799999833106995 12523 5027 17536 HBL1_DMSO_200M_050219_2,17552 HBL1_DMSO_200M_050219_2,17552,FYVDSDMVNEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17553 93.331 800.0 331090.0 25 0 19852.0 + 33869 SLFETAWEA 9 122 1053.488651445446 1052.481374978846 1 1053.487597644329 MULTI CID FTMS 0 0 0 17536 87249.0859375 0.3716763110047426 -1 0.1027145385742187 17 Unmodified _SLFETAWEA_ ENSG00000184445|ENST00000333479|KNTC1 128.3654064809346 0.0055442937744054 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}ETAGEEA 10 2 + 86.829 0.0 0.0 8.2499 8.2499 83.856 0.0 0.0 0.0 7.873767320247595 16.53212513775344 7.873767320247595 2.998037644757048 0 1.392159058960253 1.2218487496163564 2.9876954943324545 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}ETAGEEA;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}ETAWEA;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}ETAEGEA;[{M(Oxidation (M))|F}E]TVTAGEEA;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[DP]AG{M(Oxidation (M))|F}EA;[{M(Oxidation (M))|F}E]TVTAWEA;[{M(Oxidation (M))|F}E]TVTAEGEA;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}ETQEEA;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}E[PG]G{M(Oxidation (M))|F}EA;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}TEAGEEA 8.2499;7.9651;7.9283;7.5018;7.3219;7.217;7.1802;7.1325;7.1169;7.0259 -;+;-;-;-;-;-;-;-;- + 20449 1 1.395 165341.6 0.5699999928474426 12524 5027 17536 HBL1_DMSO_200M_050219_2,17553 HBL1_DMSO_200M_050219_2,17553,SLFETAWEA True True SLFETAWEA 93.33137 1053.48759764433 2377915.25 17536.0 ENSG00000184445|ENST00000333479|KNTC1 7.633291880289714 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17555 93.336 11.0 4619000.0 25 0 498260.0 + 16368 IYPVNAISF 9 56 512.2792297186097 1022.5439065040194 2 512.2795287966728 MULTI CID FTMS 0 0 0 17554 5293129.5 1.0 0 0.0 1 Unmodified _IYPVNAISF_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 24.67388899826682 0.2172451872415813 4 [VP]NA{I|L}Y 6 4 39.218 0.0 0.0 3.8354 0.0 0.0 0.0 362.1694307562256 362.1694307562256 12.153500133247732 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.7614393726401688 [VP]NA{I|L}Y 3.8354 - 85 1 1.391 41895.2 1.0 12525 5028 17554 HBL1_DMSO_200M_050219_2,17555 HBL1_DMSO_200M_050219_2,17555,IYPVNAISF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17556 93.337 24.0 2000400.0 25 0 220570.0 + 17218 KLLEYIEEI 9 73 575.3231961134347 1148.6318392936694 2 575.3239013552666 MULTI CID FTMS 0 0 0 17554 1941218.75 0.7232555986380035 1 -0.1086273193359375 2 Unmodified _KLLEYIEEI_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 28.23362336080872 0.1719529537093671 4 {[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L} 9 4 + 66.604 0.0 0.0 5.7985 5.7985 83.288 0.0 0.0 0.0 8.595756168365014 50.406075122407685 8.595756168365014 8.482587709797329 0 0.7742275032520141 0.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]Y{I|L}EE{I|L};[VP][R{I|L}]Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L} 5.7985;5.0601;2.1639 -;-;- 91 1 1.391 43552.3 1.0 12526 5028 17554 HBL1_DMSO_200M_050219_2,17556 HBL1_DMSO_200M_050219_2,17556,KLLEYIEEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17557 93.338 26.0 2206500.0 25 0 293620.0 + 19497 LFLEKAMQL 9 71 546.8095531216218 1091.6045533100437 2 546.8100463747978 MULTI CID FTMS 0 0 0 17554 1876349.125 0.7735978956775118 1 -0.1086273193359375 3 Unmodified _LFLEKAMQL_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 56.17704186161178 0.0281986971544335 4 {I|L}{M(Oxidation (M))|F}{I|L}EH 5 5 42.563 0.0 0.0 3.8991 0.0 0.0 0.0 449.2514742486938 449.2514742486938 12.11249690339386 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 {I|L}{M(Oxidation (M))|F}{I|L}EH 3.8991 - 210 + 1 1.391 49750.7 1.0 12527 5028 17554 HBL1_DMSO_200M_050219_2,17557 HBL1_DMSO_200M_050219_2,17557,LFLEKAMQL True True LFLEKAMQL 93.33827 546.8106 38732816.0 17554.0 ENSG00000109320|ENST00000226574|NFKB1;;nc|ENSG00000109320|P19838|NFKB1;;nc|ENSG00000109320|P19838-3|NFKB1 4.465284784634908 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17558 93.339 35.0 2191900.0 25 0 343800.0 + 36312 SYLFSHVPL 9 89 531.7844917538179 1061.5544305744356 2 531.7850829958916 MULTI CID FTMS 0 0 0 17554 1280466.5 0.7016850265580757 1 -0.1086273193359375 4 Unmodified _SYLFSHVPL_ ENSG00000101911|ENST00000380668|PRPS2;ENSG00000147224|ENST00000372435|PRPS1;ENSG00000229937|ENST00000506618|PRPS1L1;nc|ENSG00000101911|P11908-2|PRPS2;nc|ENSG00000147224|P60891-2|PRPS1 48.345845343767074 0.0439967357579942 4 [HV]S{M(Oxidation (M))|F}{I|L}YS[{I|L}P] 9 6 + 37.118 0.0 0.0 3.4966 3.4966 70.675 0.0 0.0 0.0 4.604546065625428 7.147642715192507 4.604546065625428 4.604546065625428 0 0.3807196863200844 0.9208187539523752 0.0 0.0 [HV]S{M(Oxidation (M))|F}{I|L}YS[{I|L}P];[HS]{M(Oxidation (M))|F}V{I|L}YS[{I|L}P];[HS]{M(Oxidation (M))|F}{I|L}VYS[{I|L}P];[HV]S{M(Oxidation (M))|F}[YT]V[{I|L}P];[HS]V{M(Oxidation (M))|F}{I|L}YS[{I|L}P];[HS]{M(Oxidation (M))|F}V[YT]V[{I|L}P];[HS]V{M(Oxidation (M))|F}[YT]V[{I|L}P];{[QN]|[E{I|L}]|[KN]}{I|L}D{I|L}YS[{I|L}P];{[QN]|[E{I|L}]|[KN]}{I|L}EVYS[{I|L}P];{NN|[MP]|[D{I|L}]|[EV]}{[QN]|[E{I|L}]|[KN]}{I|L}YS[{I|L}P] 3.4966;3.0628;2.9011;2.8986;2.4915;2.4648;1.8935;1.4072;1.2455;1.0391 -;-;-;-;-;-;-;-;-;- 439 1 1.391 62063.0 1.0 12528 5028 17554 HBL1_DMSO_200M_050219_2,17558 HBL1_DMSO_200M_050219_2,17558,SYLFSHVPL True True SYLFSHVPL 93.339449 531.785082995892 28540492.0 17554.0 ENSG00000147224|ENST00000372435|PRPS1;;ENSG00000229937|ENST00000506618|PRPS1L1;;ENSG00000101911|ENST00000380668|PRPS2;;nc|ENSG00000147224|P60891-2|PRPS1;;nc|ENSG00000101911|P11908-2|PRPS2 6.487574577331543 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17559 93.341 45.0 1293300.0 25 0 253100.0 + 4670 DAYVLPKLYV 10 71 590.8342673449122 1179.6539817566245 2 590.8347045779228 MULTI CID FTMS 0 0 0 17554 1183262.625 0.0338684629340283 -4 0.4471206665039062 5 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 53.832793166522166 0.0576554960245129 4 {[DA]|[EG]}YV{I|L}PK{I|L}YV 10 0 {[DA]|[EG]}Y + + 37.695 19.666 5.6328 3.1955 3.1955 46.361 0.0 0.0 0.0 0.0 12.28933227713462 0.0 0.0 0 1.5 0.0 0.0 0.0 + + {[DA]|[EG]}YV{I|L}PK{I|L}YV 3.1955 + + 174 + 1 1.391 51345.6 1.0 12529 5028 17554 HBL1_DMSO_200M_050219_2,17559 HBL1_DMSO_200M_050219_2,17559,DAYVLPKLYV True True DAYVLPKLYV 93.340705 590.834704577923 1519908736.0 17554.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 7.49202839533488 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17560 93.342 51.0 1390100.0 25 0 252440.0 + 14714 IKEKEIIV 8 92 486.3104821332647 970.6064113333292 2 486.3105956912041 MULTI CID FTMS 0 0 0 17554 927283.0625 1.0 0 0.0 6 Unmodified _IKEKEIIV_ REV__ENSG00000163092|ENST00000409195|XIRP2;REV__nc|ENSG00000163092|A4UGR9-2|XIRP2;REV__nc|ENSG00000163092|A4UGR9-3|XIRP2;REV__nc|ENSG00000163092|A4UGR9|XIRP2 26.88365393820708 0.4786498634179528 4 V{I|L}E{I|L}V 5 -1 24.693 0.0 0.0 2.5441 0.0 0.0 399.2487660138688 0.0 399.2487660138688 0.0 6.73393743112328 0.0 0.0 0 0.8182503180159344 0.0 0.3807196863200844 0.0 V{I|L}E{I|L}V 2.5441 - 315 1 1.391 56596.8 1.0 12530 5028 17554 HBL1_DMSO_200M_050219_2,17560 HBL1_DMSO_200M_050219_2,17560,IKEKEIIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17561 93.344 96.0 549560.0 25 0 54431.0 + 4497 DAYIPLQI 8 70 466.7579558315813 931.5013587299628 2 466.7578002810478 MULTI CID FTMS 0 0 0 17554 481505.875 0.9708045803926708 1 -0.1086273193359375 7 Unmodified _DAYIPLQI_ ENSG00000104872|ENST00000262265|PIH1D1;ENST00000595633.5_1_19:49949641-49950433:-|nuORF;ENST00000602076.5_1_19:49949641-49950083:-|nuORF 44.40701690623563 0.1655546087385432 4 {[DA]|[EG]}Y{I|L}P 5 3 33.416 0.0 0.0 3.5874 0.0 0.0 0.0 369.213308763419 369.213308763419 11.505149978319906 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}Y{I|L}P 3.5874 + + 122 1 1.391 45113.0 1.0 12531 5028 17554 HBL1_DMSO_200M_050219_2,17561 HBL1_DMSO_200M_050219_2,17561,DAYIPLQI False True DAYIPLQI 93.344103 466.757800281048 4849491.5 17554.0 ENSG00000104872|ENST00000262265|PIH1D1;;ENST00000602076.5_1_19:49949641-49950083:-|nuORF;;ENST00000595633.5_1_19:49949641-49950433:-|nuORF 4.6760430335998535 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17562 93.347 137.0 760360.0 25 0 45652.0 -1 0 93 926.933893010274 1851.853233087348 2 926.9349853396416 MULTI CID FTMS 0 0 0 17554 443683.21875 0.7732329947007051 1 -0.1086273193359375 8 4 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}YQV 13 -1 64.444 0.0 0.0 3.48 0.0 0.0 0.0 155.08147080454606 155.08147080454606 38.87959079859674 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}YQV 3.48 - 1485 1 1.391 73884.9 1.0 12532 5028 17554 HBL1_DMSO_200M_050219_2,17562 HBL1_DMSO_200M_050219_2,17562, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17563 93.35 143.0 536990.0 25 0 52808.0 + 40518 VIVELIYKV 9 114 538.341899913485 1074.66924689377 2 538.3421508669853 MULTI CID FTMS 0 0 0 17554 325395.28125 0.086947529317661 5 -0.5639877319335938 9 Unmodified _VIVELIYKV_ ENSG00000129083|ENST00000439561|COPB1 26.020703789607367 0.2001090068861241 4 [{I|L}V]VE{I|L}{I|L}YKV 9 0 + 62.748 0.0 0.0 5.8388 5.8388 90.479 0.0 0.0 0.0 29.89454989793387 6.188711477281501 6.188711477281501 62.74789996930849 0 0.7742275032520141 2.0 0.4247425010840047 0.0 + + [{I|L}V]VE{I|L}{I|L}YKV 5.8388 + + 366 + 1 1.391 64457.7 1.0 12533 5028 17554 HBL1_DMSO_200M_050219_2,17563 HBL1_DMSO_200M_050219_2,17563,VIVELIYKV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17564 93.353 179.0 242080.0 25 0 73551.0 -1 0 61 560.0047006974787 1676.992272692636 3 560.0049926638603 MULTI CID FTMS 0 0 0 17554 267079.4375 0.900774579067942 -2 0.2504653930664062 10 4 {I|L} 1 -1 12.474 0.0 0.0 0.74385 0.0 0.0 1545.8971169082597 0.0 1545.8971169082597 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.74385 - 17 + 1 1.391 41634.6 1.0 12534 5028 17554 HBL1_DMSO_200M_050219_2,17564 HBL1_DMSO_200M_050219_2,17564, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17565 93.36 376.0 211290.0 25 0 20925.0 + 998 AFYDWDNTEL 10 96 637.2720515403214 1272.5295501474427 2 637.2723266482353 MULTI CID FTMS 0 0 0 17554 259501.0625 1.0 0 0.0 11 Unmodified _AFYDWDNTEL_ ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2 20.453626601364224 0.5043500229302764 4 DWDC{M(Oxidation (M))|F}{I|L} 6 6 23.321 0.0 0.0 1.8326 0.0 0.0 475.227073196074 0.0 475.227073196074 0.0 5.617515817243515 0.0 0.0 0 0.3935078169319297 0.0 0.0 0.0 DWDC{M(Oxidation (M))|F}{I|L} 1.8326 - 499 + 1 1.391 64563.9 1.0 12535 5028 17554 HBL1_DMSO_200M_050219_2,17565 HBL1_DMSO_200M_050219_2,17565,AFYDWDNTEL False True AFYDWDNTEL 93.360018 637.272326648235 2364158.75 17554.0 ENSG00000184432|ENST00000333188|COPB2;;nc|ENSG00000184432|P35606-2|COPB2 6.347970326741536 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17566 93.364 220.0 409830.0 25 0 45059.0 + 7978 ELVRFLPAV 9 111 522.3154854296874 1042.6164179261748 2 522.3163940310478 MULTI CID FTMS 0 0 0 17554 245339.71875 1.0 0 0.0 12 Unmodified _ELVRFLPAV_ ENSG00000111641|ENST00000322166|NOP2;ENST00000542015.1_1_12:6669877-6677084:-|nuORF;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2;nc|ENSG00000111641|P46087-4|NOP2 71.92227651296345 0.0203558744033348 4 {[QN]|[E{I|L}]|[KN]}VR{M(Oxidation (M))|F}{I|L}APV 9 2 + 53.438 0.0 0.0 5.1253 5.1253 86.039 0.0 0.0 0.0 23.50756462942641 18.51219677964764 18.51219677964764 23.50756462942641 0 1.298455006504028 1.5228787452803376 1.6861818737241734 0.0 {[QN]|[E{I|L}]|[KN]}VR{M(Oxidation (M))|F}{I|L}APV;{I|L}{I|L}DR{M(Oxidation (M))|F}{I|L}APV;{[QN]|[E{I|L}]|[KN]}[KG]RRWV;[R{M(Oxidation (M))|F}]{I|L}{M(Oxidation (M))|F}[HK]PV;[{I|L}T][HK]{M(Oxidation (M))|F}{I|L}[VS]V;[R{M(Oxidation (M))|F}]RRAAAPV;[R{M(Oxidation (M))|F}]RRAAPAV;[{I|L}T]{[NV]|[RG]}RRWV;[Q{I|L}][KQ]{M(Oxidation (M))|F}{I|L}APV;{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}[QA]{I|L}WV 5.1253;2.8707;2.4915;2.2139;1.8986;1.2753;1.1554;1.1084;1.0436;1.0422 -;-;-;-;-;-;-;-;-;- 316 1 1.391 80676.9 1.0 12536 5028 17554 HBL1_DMSO_200M_050219_2,17566 HBL1_DMSO_200M_050219_2,17566,ELVRFLPAV True True ELVRFLPAV 93.364185 522.316394031048 2210831.75 17554.0 ENST00000542015.1_1_12:6669877-6677084:-|nuORF;;ENSG00000111641|ENST00000322166|NOP2;;nc|ENSG00000111641|P46087-2|NOP2;;nc|ENSG00000111641|P46087-4|NOP2;;nc|ENSG00000111641|P46087-3|NOP2 7.1347395579020185 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17567 93.374 555.0 307600.0 25 0 30047.0 + 29476 QLIPAVPGI 9 130 454.2839574945136 906.5533620558272 2 454.2842590212822 MULTI CID FTMS 0 0 0 17554 210057.875 1.0 0 0.0 13 Unmodified _QLIPAVPGI_ ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160 28.486842064014134 0.1687311288560894 4 [Q{I|L}]{I|L}[PG]{M(Oxidation (M))|F}P 7 4 24.499 0.0 0.0 2.7025 0.0 0.0 0.0 151.14543904240853 151.14543904240853 8.742209500285012 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.2059771852360797 [Q{I|L}]{I|L}[PG]{M(Oxidation (M))|F}P 2.7025 - 1265 1 1.391 132102.2 1.0 12537 5028 17554 HBL1_DMSO_200M_050219_2,17567 HBL1_DMSO_200M_050219_2,17567,QLIPAVPGI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17568 93.379 251.0 394880.0 25 0 40498.0 + 5656 DPFAFIHKI 9 106 363.2027796300148 1086.5865094902445 3 363.2026244997978 MULTI CID FTMS 0 0 0 17554 193824.234375 0.4394127146240337 -2 0.2504653930664062 14 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 29.081581746732265 0.1611639662936252 4 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H{I|L}K 9 2 + 74.245 0.0 0.0 6.8328 6.8328 78.171 0.0 0.0 0.0 33.467874862246575 1.6749108729376303 1.6749108729376303 1.6749108729376303 0 0.0 1.6989700043360187 0.0 0.2215141619232908 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H{I|L}K;DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L};DP{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}H{I|L}K;DP{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}HK{I|L};DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}{I|L}HK;DP{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}H{I|L}K;DP{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}HK{I|L};DP{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}{I|L}HK;DP{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}{I|L}HK;DP{M(Oxidation (M))|F}{I|L}[KG][WP]K 6.8328;6.6787;6.1896;6.0354;5.9857;5.7505;5.5963;5.3424;4.9033;3.2927 -;+;-;-;-;-;-;-;-;- + 307 + 1 1.391 86805.3 1.0 12538 5028 17554 HBL1_DMSO_200M_050219_2,17568 HBL1_DMSO_200M_050219_2,17568,DPFAFIHKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17569 93.382 201.0 304130.0 25 0 56217.0 + -1 YGYLCVIKV 9 95 529.2928325298379 528.2855560632379 1 529.2949706912041 MULTI CID FTMS 0 0 0 17554 224192.609375 0.7291443451337382 1 -0.1086273193359375 15 ENSG00000154760|ENST00000285013|SLFN13 4 [YG]Y 3 -1 19.666 0.0 0.0 3.7226 0.0 0.0 0.0 142.114418938491 142.114418938491 5.6863623584101255 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [YG]Y 3.7226 - 52 1 1.391 55251.6 1.0 12539 5028 17554 HBL1_DMSO_200M_050219_2,17569 HBL1_DMSO_200M_050219_2,17569, False False YGYLCVIKV 93.382413 529.294970691204 3839058.0 17554.0 ENSG00000154760|ENST00000285013|SLFN13 3.8303354581197104 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17570 93.386 187.0 258980.0 25 0 29243.0 + 34400 SLVDEFKEL 9 92 540.2846411817512 1078.5547294303024 2 540.2850219607353 MULTI CID FTMS 0 0 0 17554 169737.90625 0.0821308392730721 3 -0.29022216796875 16 Unmodified _SLVDEFKEL_ ENSG00000196419|ENST00000360079|XRCC6;ENST00000478914.1_1_22:42052971-42057696:+|nuORF;nc|ENSG00000196419|P12956-2|XRCC6 18.721224879955976 0.3299216912490967 4 {[TV]|[{I|L}S]}VDE{M(Oxidation (M))|F} 6 3 48.689 0.0 0.0 4.5143 0.0 0.0 0.0 385.2101485224831 385.2101485224831 36.21523434085148 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + {[TV]|[{I|L}S]}VDE{M(Oxidation (M))|F} 4.5143 + + 125 + 1 1.391 42666.9 1.0 12540 5028 17554 HBL1_DMSO_200M_050219_2,17570 HBL1_DMSO_200M_050219_2,17570,SLVDEFKEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17571 93.401 800.0 262900.0 25 0 8601.0 + 44151 YLDPFLQK 8 115 1023.5509215260038 1022.5436450594036 1 1026.560473620892 MULTI CID FTMS 0 0 0 17554 162366.234375 1.0 0 0.0 17 Unmodified _YLDPFLQK_ REV__ENSG00000118655|ENST00000650450|DCLRE1B;REV__ENST00000466480.1_1_1:114448336-114454776:+|nuORF 26.34127834903884 0.4900704351052977 4 [VP]W{I|L}{I|L}{M(Oxidation (M))|F} 6 -1 43.778 0.0 0.0 4.2813 0.0 0.0 0.0 264.107401733485 264.107401733485 25.78438639803648 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 [VP]W{I|L}{I|L}{M(Oxidation (M))|F} 4.2813 - 1639 1 1.391 134449.0 0.7300000190734863 12541 5028 17554 HBL1_DMSO_200M_050219_2,17571 HBL1_DMSO_200M_050219_2,17571,YLDPFLQK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17572 93.415 800.0 266620.0 25 0 12890.0 -1 MSRVAVMGHS 10 135 1090.5089637343954 1089.5016872677954 1 1092.516772449017 MULTI CID FTMS 0 0 0 17554 159908.90625 0.6430578583487838 -4 0.4471206665039062 18 Oxidation (M) _M(Oxidation (M))SRVAVMGHS_ ENSG00000158006|ENST00000374282|PAFAH2 29.081581746732265 0.3152867722954398 4 [EP]VEPPPPDN 10 -1 + 43.708 0.0 0.0 4.0118 4.0118 71.81 0.0 0.0 0.0 13.805239387784116 6.551470135525428 6.551470135525428 4.279032320494807 0 0.0 0.958607314841775 0.0 0.0 [EP]VEPPPPDN;[EP]VEPP[HA]TN;[EP]VEPP[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F};[EP]VEN{I|L}QD{M(Oxidation (M))|F};[EP]VEPP[HA]NT;[EP]V{M(Oxidation (M))|F}SVSPDN;[EP]VEGG{I|L}QD{M(Oxidation (M))|F};[EP]VEP{[QD]|[EN]|[WG]|[KD]|[RS]}YN;[EP]V{M(Oxidation (M))|F}SV[TP]TN;{[QD]|[EN]|[WG]|[KD]|[RS]}NPPPPPDN 4.0118;3.619;3.4104;3.3494;3.2958;3.1444;2.9932;2.8578;2.7516;2.7446 -;-;-;-;-;-;-;-;-;- 11512 1 1.391 133102.3 0.7099999785423279 12542 5028 17554 HBL1_DMSO_200M_050219_2,17572 HBL1_DMSO_200M_050219_2,17572,MSRVAVMGHS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17573 93.425 564.0 279530.0 25 0 58157.0 + 25719 NIIKLIDTV 9 140 514.8208721512335 1027.627191369267 2 514.8209716677666 MULTI CID FTMS 0 0 0 17554 128256.453125 1.0 0 0.0 19 Unmodified _NIIKLIDTV_ ENSG00000070770|ENST00000262506|CSNK2A2;ENST00000562367.1_1_16:58208309-58230657:-|nuORF 39.94969957227396 0.0757326808254658 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[CA]|SS}{I|L}{I|L}R{I|L} 9 5 + 71.215 0.0 0.0 6.9301 6.9301 90.086 0.0 0.0 0.0 27.14764271519251 12.671717284030144 12.671717284030144 9.365429718850734 0 1.0501648626366045 2.0 0.4247425010840047 0.7134679910804405 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[CA]|SS}{I|L}{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[WT]|[RM]}{I|L}{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[CA]|SS}{I|L}{I|L}{I|L}R;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[WT]|[RM]}{I|L}R{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[WT]|[RM]}{I|L}{I|L}{I|L}R;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[WT]|[RM]}{I|L}{I|L}R;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[K{I|L}]{NN|[MP]|[D{I|L}]|[EV]}S{I|L};{I|L}{I|L}KD{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{I|L}{I|L}K{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{I|L}{I|L}R[KA]{NN|[MP]|[D{I|L}]|[EV]}S{I|L} 6.9301;6.0187;5.697;5.6482;4.7856;4.4151;2.514;1.608;1.3518;1.2151 -;-;-;-;-;-;-;-;-;- 985 + 1 1.391 126854.6 1.0 12543 5028 17554 HBL1_DMSO_200M_050219_2,17573 HBL1_DMSO_200M_050219_2,17573,NIIKLIDTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17574 93.44 800.0 90917.0 25 0 11442.0 -1 0 97 379.7500470459751 757.4855411587503 2 379.7498657107353 MULTI CID FTMS 0 0 0 17554 107331.296875 0.7072661547469912 2 -0.2074508666992187 20 4 {I|L}P{I|L}[R{I|L}]{M(Oxidation (M))|F} 6 -1 + 49.17 0.0 0.0 6.4912 6.4912 92.704 0.0 0.0 0.0 25.27683797239683 3.767507096020992 3.767507096020992 49.170236341498025 0 0.2215141619232908 1.6989700043360187 0.0 0.0 {I|L}P{I|L}[R{I|L}]{M(Oxidation (M))|F} 6.4912 - 59 + 1 1.391 62377.9 0.4600000083446502 12544 5028 17554 HBL1_DMSO_200M_050219_2,17574 HBL1_DMSO_200M_050219_2,17574, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17576 93.445 9.9 6778400.0 25 0 530610.0 + 5653 DPFAFIHKI 9 84 544.3004480669223 1086.5863432006445 2 544.3008300662041 MULTI CID FTMS 0 0 0 17575 5587023.5 0.5537697017585559 -2 0.256378173828125 1 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 69.10491478415734 0.0214449631113747 4 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H{I|L}K 9 2 + 95.9 0.0 0.0 8.8258 8.8258 97.431 0.0 0.0 0.0 69.45677228596267 11.783343794609138 11.783343794609138 27.25772496747986 0 2.079689690656103 2.0 0.0 0.2742275032520141 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H{I|L}K;D{I|L}MA{M(Oxidation (M))|F}{I|L}H{I|L}K;D{I|L}[WY]{I|L}H{I|L}K;D{I|L}[YV]AK[HN]K;D[YV]{I|L}AK[HN]K;D{I|L}[YV]KA[HN]K;D[YV]{I|L}KA[HN]K 8.8258;6.3173;3.4907;1.9687;1.6917;1.6917;1.4147 -;-;-;-;-;-;- 322 + 1 1.391 59642.8 1.0 12545 5029 17575 HBL1_DMSO_200M_050219_2,17576 HBL1_DMSO_200M_050219_2,17576,DPFAFIHKI True True DPFAFIHKI 93.44454 544.300830066204 513052559.5 17575.0 nc|ENSG00000117139|Q9UGL1-2|KDM5B;;ENSG00000117139|ENST00000367265|KDM5B 7.923526128133138 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17577 93.446 24.0 1667900.0 25 0 212110.0 + 43931 YGIKDDVFLSV 11 51 628.3321161089559 1254.6496792847115 2 628.3325683474541 MULTI CID FTMS 0 0 0 17575 1883244.375 0.6663086857351402 1 -0.0988235473632812 2 Unmodified _YGIKDDVFLSV_ ENSG00000134333|ENST00000422447|LDHA;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA 30.7034409873982 0.3712764582118616 4 [VS]{I|L}[YN]DV{M(Oxidation (M))|F}{I|L}SV 11 4 + 46.375 0.0 0.0 3.6962 3.6962 68.702 0.0 0.0 0.0 4.149733479708182 4.692063741187447 4.149733479708182 3.0102999566398125 0 1.0924778212679485 1.3979400086720375 0.0 0.0 [VS]{I|L}[YN]DV{M(Oxidation (M))|F}{I|L}SV;[VS]{I|L}[YN]D{M(Oxidation (M))|F}V{I|L}SV;{[TV]|[{I|L}S]}V[YN]DV{M(Oxidation (M))|F}{I|L}SV;{[TV]|[{I|L}S]}V[YN]D{M(Oxidation (M))|F}V{I|L}SV;[VS]{M(Oxidation (M))|F}[RD]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VW;[VS]{I|L}[YN]D{M(Oxidation (M))|F}{I|L}VSV;{[TV]|[{I|L}S]}V[YN]D{M(Oxidation (M))|F}{I|L}VSV;[VS]{I|L}[YN]{I|L}[{M(Oxidation (M))|F}T]{I|L}SV;{[TV]|[{I|L}S]}V[YN]{I|L}[{M(Oxidation (M))|F}T]{I|L}SV;[VS]{I|L}[YN]{I|L}{[{M(Oxidation (M))|F}D]|MM}VSV 3.6962;3.4563;3.3655;3.1255;2.9398;2.9378;2.607;2.582;2.2513;2.0635 -;-;-;-;-;-;-;-;-;- 226 1 1.391 39027.4 1.0 12546 5029 17575 HBL1_DMSO_200M_050219_2,17577 HBL1_DMSO_200M_050219_2,17577,YGIKDDVFLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17578 93.447 32.0 2314000.0 25 0 502820.0 + 20179 LLAAKVGA 8 69 371.7449581964612 741.4753634597224 2 371.7446777224541 MULTI CID FTMS 0 0 0 17575 1718585.625 0.5967812659952677 -1 0.1086273193359375 3 Unmodified _LLAAKVGA_ REV__ENSG00000065883|ENST00000181839|CDK13;REV__ENST00000465643.1_1_7:40132349-40134576:+|nuORF;REV__nc|ENSG00000065883|Q14004-2|CDK13 5.760428011301431 0.7893668129297577 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}{I|L}R 6 -1 + 54.64 0.0 0.0 7.3691 7.3691 78.645 0.0 0.0 0.0 26.478174818886373 1.0266234189714751 1.0266234189714751 1.0266234189714751 0 0.4247425010840047 2.0 0.0 0.6747425010840047 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}{I|L}R;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}R{I|L} 7.3691;7.2306 -;- 21 + 1 1.391 63883.2 1.0 12547 5029 17575 HBL1_DMSO_200M_050219_2,17578 HBL1_DMSO_200M_050219_2,17578,LLAAKVGA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17579 93.448 63.0 1137900.0 25 0 162300.0 + 10570 FVIDLQTRL 9 56 552.8243666243062 1103.6341803154123 2 552.8245117068291 MULTI CID FTMS 0 0 0 17575 837737.8125 0.5664749228502673 1 -0.0988235473632812 4 Unmodified _FVIDLQTRL_ ENSG00000131051|ENST00000253363|RBM39;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;nc|ENSG00000131051|Q14498-3|RBM39 34.93206674587334 0.1032771302489716 4 V{[VA]|[{I|L}G]}Q{I|L}D{I|L}VE 9 7 60.367 0.0 0.0 5.4698 0.0 0.0 119.07406050849764 0.0 119.07406050849764 0.0 48.58410103352233 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 V{[VA]|[{I|L}G]}Q{I|L}D{I|L}VE 5.4698 - 99 1 1.391 58727.6 1.0 12548 5029 17575 HBL1_DMSO_200M_050219_2,17579 HBL1_DMSO_200M_050219_2,17579,FVIDLQTRL True True FVIDLQTRL 93.448444 552.824511706829 23752540.0 17575.0 ENST00000492779.5_1_20:34292405-34320086:-|nuORF;;nc|ENSG00000131051|Q14498-3|RBM39;;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;;ENSG00000131051|ENST00000253363|RBM39;;ENST00000429968.5_1_20:34292405-34322136:-|nuORF 5.38042672475179 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17580 93.45 54.0 1205800.0 25 0 200940.0 + 13279 HIPDVITYL 9 74 535.7982331066675 1069.5819132801348 2 535.7982055544853 MULTI CID FTMS 0 0 0 17575 796172.5625 0.3448937493975956 -7 0.8052825927734375 5 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 42.09456458481378 0.0639583784996157 4 [H{I|L}][DP]V{I|L}TY{I|L} 9 0 + 50.594 0.0 0.0 4.7303 4.7303 76.86 0.0 0.0 0.0 9.030899869919438 8.384767769392738 8.384767769392738 6.262874945799766 0 1.024227503252014 1.6989700043360187 0.5 0.0 + + [H{I|L}][DP]V{I|L}TY{I|L};[H{I|L}][DP]VT{I|L}Y{I|L};[DP]V{I|L}H{I|L}TY{I|L};[VP]D{I|L}H{I|L}TY{I|L};[VP]VEH{I|L}TY{I|L};[DP]V{I|L}HT{I|L}Y{I|L};[VP]D{I|L}HT{I|L}Y{I|L};[DP]V{I|L}TH{I|L}Y{I|L};[VP]D{I|L}TH{I|L}Y{I|L};[VP]VEHT{I|L}Y{I|L} 4.7303;4.1448;3.886;3.886;3.4877;3.3004;3.3004;3.1144;3.1144;2.9022 +;-;-;-;-;-;-;-;-;- + 318 1 1.391 60558.6 1.0 12549 5029 17575 HBL1_DMSO_200M_050219_2,17580 HBL1_DMSO_200M_050219_2,17580,HIPDVITYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17581 93.453 146.0 686970.0 25 0 76580.0 + 1258 AILKELVTL 9 104 500.3262586601526 998.6379643871052 2 500.3261901736259 MULTI CID FTMS 0 0 0 17575 487196.59375 0.8453632771069703 -1 0.1086273193359375 6 Unmodified _AILKELVTL_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF 69.10491478415734 0.0214449631113747 4 [{I|L}A]{I|L}KE{I|L}VT{I|L} 9 0 + 57.259 0.0 0.0 5.7338 5.7338 80.987 0.0 0.0 0.0 8.534087492996392 7.900990676322905 7.900990676322905 6.197887582883936 0 1.5924778212679485 1.6989700043360187 0.3252574989159953 0.0 + + [{I|L}A]{I|L}KE{I|L}VT{I|L};[{I|L}A]{I|L}[VS]A{I|L}VT{I|L};[{I|L}A]{I|L}[TA]{I|L}A{I|L}T{I|L};[{I|L}A]{I|L}KEV{I|L}T{I|L};[{I|L}A]{I|L}[TA]{I|L}T{I|L}A{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}A{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}KV{I|L}A{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}KV{I|L}T{I|L}A{I|L};[{I|L}A][VS]{I|L}A{I|L}VT{I|L};[{I|L}A]{I|L}[VS]VA{I|L}T{I|L} 5.7338;5.1131;5.062;4.9545;4.9426;4.8792;4.8281;4.7086;4.5868;4.5843 +;-;-;-;-;-;-;-;-;- + 1070 1 1.391 80375.1 1.0 12550 5029 17575 HBL1_DMSO_200M_050219_2,17581 HBL1_DMSO_200M_050219_2,17581,AILKELVTL True True AILKELVTL 93.45275 500.326190173626 4792123.5 17575.0 ENST00000589087.5_1_19:2806818-2807876:+|nuORF;;ENSG00000172009|ENST00000307741|THOP1 5.217623869578044 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17582 93.455 93.0 614860.0 25 0 65268.0 + 9654 FLPDPSALQNL 11 93 607.8244566049905 1213.6343602767809 2 607.8244506716728 MULTI CID FTMS 0 0 0 17575 420102.0625 0.3167767371194854 -3 0.3590927124023437 7 Unmodified _FLPDPSALQNL_ ENSG00000158019|ENST00000379624|BABAM2;nc|ENSG00000158019|Q9NXR7-1|BABAM2;nc|ENSG00000158019|Q9NXR7-3|BABAM2;nc|ENSG00000158019|Q9NXR7-4|BABAM2 20.41453444215458 0.6105011870913812 4 [DP][PS]A{I|L}QD 8 4 36.028 0.0 0.0 2.9686 0.0 0.0 0.0 387.2389494703934 387.2389494703934 18.899754887427623 0.0 0.0 0.0 0 0.0 0.958607314841775 0.958170666312956 0.3494850021680094 [DP][PS]A{I|L}QD 2.9686 - 884 1 1.391 47925.2 1.0 12551 5029 17575 HBL1_DMSO_200M_050219_2,17582 HBL1_DMSO_200M_050219_2,17582,FLPDPSALQNL False True FLPDPSALQNL 93.454807 607.824450671673 51940962.0 17575.0 nc|ENSG00000158019|Q9NXR7-4|BABAM2;;nc|ENSG00000158019|Q9NXR7-3|BABAM2;;nc|ENSG00000158019|Q9NXR7-1|BABAM2;;ENSG00000158019|ENST00000379624|BABAM2 7.115253766377767 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17583 93.458 164.0 550490.0 25 0 59232.0 + 25868 QVFPGLLERV 10 90 579.8418157046 1157.669078476 2 579.3380004763603 MULTI CID FTMS 0 0 0 17575 390726.1875 0.8180120963779561 -1 0.1086273193359375 8 Unmodified _NLFHIRVFI_ nc|ENSG00000130638|Q9UBB4-2|ATXN10;ENSG00000130638|ENST00000252934|ATXN10;ENST00000483549.5_1_22:46114317-46136469:+|nuORF 16.942295170755138 0.3780752226737986 4 [{M(Oxidation (M))|F}V]EPG{I|L}{I|L}E[RV] 10 9 + 49.319 0.0 0.0 4.2602 4.2602 65.08 0.0 0.0 0.0 14.09765299137284 10.012262311882765 10.012262311882765 0.189549981487076 0 0.0 0.744727494896694 0.0 0.4247425010840047 [{M(Oxidation (M))|F}V]EPG{I|L}{I|L}E[RV];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}PG{I|L}{I|L}E[RV];{NN|[MP]|[D{I|L}]|[EV]}P{M(Oxidation (M))|F}G{I|L}{I|L}E[RV];[{M(Oxidation (M))|F}V]EV[PA]{I|L}E[RV];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}V[PA]{I|L}E[RV];{NN|[MP]|[D{I|L}]|[EV]}V{[DS]|[MA]|[CV]|TT}{I|L}{I|L}E[RV];{NN|[MP]|[D{I|L}]|[EV]}P{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}E[RV];[{M(Oxidation (M))|F}V][WP]{I|L}{I|L}E[RV];{NN|[MP]|[D{I|L}]|[EV]}V{M(Oxidation (M))|F}[PA]{I|L}E[RV];{[QD]|[EN]|[WG]|[KD]|[RS]}[KT]G{I|L}{I|L}E[RV] 4.2602;4.2438;3.877;2.6405;2.6242;2.1052;1.9972;1.9694;1.8451;1.7383 -;-;-;-;-;-;-;-;-;- 268 + 1 1.391 71946.2 1.0 12552 5029 17575 HBL1_DMSO_200M_050219_2,17583 HBL1_DMSO_200M_050219_2,17583,NLFHIRVFI False False QVFPGLLERV 93.458034 579.33800047636 39316113.0 17575.0 nc|ENSG00000130638|Q9UBB4-2|ATXN10;;ENSG00000130638|ENST00000252934|ATXN10;;ENST00000483549.5_1_22:46114317-46136469:+|nuORF 6.393496513366699 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17584 93.462 223.0 361130.0 25 0 48792.0 + 9890 FPFPTPPSV 9 102 494.7607277296627 987.5069025261254 2 494.7607299685478 MULTI CID FTMS 0 0 0 17575 224460.359375 0.5787322413688081 5 -0.5988922119140625 9 Unmodified _FPFPTPPSV_ ENSG00000150990|ENST00000308736|DHX37 81.86404211737425 0.017065112157077 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PT{M(Oxidation (M))|F}P 6 4 53.65 0.0 0.0 5.4329 0.0 0.0 0.0 298.141013372034 298.141013372034 31.10949194472356 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.1549471895720984 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PT{M(Oxidation (M))|F}P 5.4329 - 509 1 1.391 65664.3 1.0 12553 5029 17575 HBL1_DMSO_200M_050219_2,17584 HBL1_DMSO_200M_050219_2,17584,FPFPTPPSV True True FPFPTPPSV 93.462238 494.760729968548 31388568.0 17575.0 ENSG00000150990|ENST00000308736|DHX37 6.509653886159261 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17585 93.476 800.0 333030.0 25 0 60702.0 -1 VTFTNCAL 8 159 463.22659875397807 924.4386445747562 2 463.2265197634697 MULTI CID FTMS 0 0 0 17575 216948.203125 0.8522784679435972 3 -0.334686279296875 10 Carbamidomethyl (C) _VTFTNC(Carbamidomethyl (C))AL_ ENSG00000259916|ENST00000561882|AQP7B;nc|ENSG00000259916|A0A075B734|AQP7B 19.438996006549623 0.6237395211498085 4 VGV{M(Oxidation (M))|F}D 5 -1 46.517 0.0 0.0 5.0319 0.0 0.0 0.0 404.1935119095809 404.1935119095809 30.111531786702187 0.0 0.0 0.0 0 0.1595680409956017 1.5228787452803376 0.0 0.0 VGV{M(Oxidation (M))|F}D 5.0319 - 523 + 1 1.391 206696.7 0.7400000095367432 12554 5029 17575 HBL1_DMSO_200M_050219_2,17585 HBL1_DMSO_200M_050219_2,17585,VTFTNCAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17586 93.49 800.0 228770.0 25 0 25684.0 + 873 AEVDVNQKLLL 11 153 621.3575757175456 1240.7005985018911 2 621.3597289919853 MULTI CID FTMS 0 0 0 17575 198982.953125 0.0033284296924073 15 -1.5047378540039062 11 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 61.60191391372663 0.0626439052904852 4 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}{I|L} 12 -1 + 100.15 0.0 0.0 8.0719 8.0719 85.067 0.0 0.0 0.0 6.5896073695503645 16.611814434466197 6.5896073695503645 3.550981955100383 0 2.774227503252014 1.6989700043360187 0.6549471895720985 0.3494850021680094 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}E{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}GNK{I|L}G{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}AD{I|L}{I|L}G{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVAGGK{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}D{I|L}G{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}AD{I|L}G{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVANK{I|L}G{I|L}{I|L} 8.0719;7.7857;7.6437;7.6051;7.5408;7.4947;7.3386;7.3188;7.3066;7.2991 -;-;-;-;-;-;-;-;-;- 25218 1 1.391 133568.8 0.7900000214576721 12555 5029 17575 HBL1_DMSO_200M_050219_2,17586 HBL1_DMSO_200M_050219_2,17586,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17587 93.494 188.0 329570.0 25 0 33292.0 + 19537 LFPMPRVIY 9 87 568.321174530099 1134.627796126998 2 568.3206054568291 MULTI CID FTMS 0 0 0 17575 183242.984375 0.8899893012026395 1 -0.0988235473632812 12 Unmodified _LFPMPRVIY_ ENSG00000013293|ENST00000231706|SLC7A14 21.74664581756881 0.2544899275067181 4 PMP{[QN]|[E{I|L}]|[KN]} 5 5 22.24 0.0 0.0 1.9602 0.0 0.0 549.3200550763687 0.0 549.3200550763687 0.0 8.261022220211949 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PMP{[QN]|[E{I|L}]|[KN]} 1.9602 - 24 1 1.391 53663.5 1.0 12556 5029 17575 HBL1_DMSO_200M_050219_2,17587 HBL1_DMSO_200M_050219_2,17587,LFPMPRVIY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17588 93.496 143.0 214290.0 25 0 32454.0 42578 VTQKWDSL 8 69 488.7585917429328 975.5026305526656 2 488.7588073611259 MULTI CID FTMS 0 0 0 17575 137707.515625 0.1649616431954303 2 -0.1815948486328125 13 Unmodified _VTQKWDSL_ ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST 18.13498045792455 0.6430038125133779 4 S{I|L} 2 6 19.196 0.0 0.0 1.9678 0.0 0.0 757.3753092409453 0.0 757.3753092409453 0.0 7.871381606472594 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 + S{I|L} 1.9678 + + 68 + 1 1.391 28358.2 1.0 12557 5029 17575 HBL1_DMSO_200M_050219_2,17588 HBL1_DMSO_200M_050219_2,17588,VTQKWDSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17589 93.51 800.0 197270.0 25 0 19568.0 + 4520 DAYLPLRL 8 145 480.77953309405433 959.5445132549088 2 480.7796203494072 MULTI CID FTMS 0 0 0 17575 121406.4296875 0.0053608272549231 11 -1.2158279418945312 14 Unmodified _DAYLPLRL_ ENSG00000062822|ENST00000440232|POLD1 42.09456458481378 0.1992492688217789 4 {[DA]|[EG]}Y{I|L}{I|L}PR{I|L} 8 2 + 59.339 0.0 0.0 6.1841 6.1841 81.001 0.0 0.0 0.0 20.97926902225012 13.91100584141732 13.91100584141732 4.744237387763093 0 0.8807196863200843 1.5228787452803376 0.0 0.6989700043360187 {[DA]|[EG]}Y{I|L}{I|L}PR{I|L};{[DA]|[EG]}Y{I|L}P{I|L}R{I|L};{[DA]|[EG]}Y{I|L}PR{I|L}{I|L};{[DA]|[EG]}Y{I|L}{I|L}[R{I|L}]P;{[DA]|[EG]}Y{I|L}VV{I|L}AP;{[DA]|[EG]}Y{I|L}[{I|L}V]VAP;{[DA]|[EG]}Y{I|L}VV[PA]{I|L};{[DA]|[EG]}Y{I|L}[{I|L}V][PG]{I|L};{[DA]|[EG]}Y{I|L}[{I|L}V]APV;{[DA]|[EG]}Y{I|L}[{I|L}V]AVP 6.1841;5.6897;5.5455;4.7343;3.6097;3.5087;3.3472;3.2462;3.1752;2.9752 -;+;-;-;-;-;-;-;-;- + 479 + 1 1.391 123956.8 0.5299999713897705 12558 5029 17575 HBL1_DMSO_200M_050219_2,17589 HBL1_DMSO_200M_050219_2,17589,DAYLPLRL False True DAYLPLRL 93.510207 480.779620349407 0.0 17575.0 ENSG00000062822|ENST00000440232|POLD1 5.432931105295817 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17590 93.525 800.0 259380.0 25 0 86292.0 12551 GVGVLHGR 8 110 397.7363967757459 793.4582406182918 2 397.7362853884697 MULTI CID FTMS 0 0 0 17575 112265.0390625 0.4359557620000407 -2 0.256378173828125 15 Unmodified _GVGVLHGR_ ENST00000587730.5_1_19:14520811-14521537:-|nuORF 2.889219685676258 0.8067950007271085 4 [MT]{M(Oxidation (M))|F} 3 8 19.041 0.0 0.0 2.3998 0.0 0.0 0.0 411.3135011986231 411.3135011986231 3.55651869704872 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [MT]{M(Oxidation (M))|F} 2.3998 - 30 1 1.391 164930.8 0.4600000083446502 12559 5029 17575 HBL1_DMSO_200M_050219_2,17590 HBL1_DMSO_200M_050219_2,17590,GVGVLHGR False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17591 93.539 800.0 147840.0 25 0 31732.0 27650 PLGSPLLL 8 111 405.2602548229989 808.5059567127978 2 405.2607910037041 MULTI CID FTMS 0 0 0 17575 109284.4453125 0.5501605243441274 11 -1.2158279418945312 16 Unmodified _PLGSPLLL_ ENST00000537708.1_1_12:6669555-6669804:-|nuORF 59.79521254764295 0.1151759508933577 4 [EP]KP{I|L}{I|L}{I|L} 7 3 + 52.615 0.0 0.0 6.5077 6.5077 78.306 0.0 0.0 0.0 2.340832060333682 14.81508216873415 2.340832060333682 2.340832060333682 0 0.3252574989159953 1.2218487496163564 1.0189301784845295 0.0 [EP]KP{I|L}{I|L}{I|L};[{I|L}P][SG]P{I|L}{I|L}{I|L};[{I|L}P]EKP{I|L}{I|L};[EP]K{I|L}P{I|L}{I|L};[{I|L}P][SG]{I|L}P{I|L}{I|L};[EP]{I|L}KP{I|L}{I|L};[KP]EP{I|L}{I|L}{I|L};[KP]E{I|L}P{I|L}{I|L};[TP][VG]P{I|L}{I|L}{I|L};[TP][VG]{I|L}P{I|L}{I|L} 6.5077;6.2182;6.056;5.7032;5.4136;5.1915;5.1164;4.3118;3.7445;2.9399 -;+;-;-;-;-;-;-;-;- + 230 1 1.391 95248.2 0.449999988079071 12560 5029 17575 HBL1_DMSO_200M_050219_2,17591 HBL1_DMSO_200M_050219_2,17591,PLGSPLLL True True LPGSPLIL 93.539011 405.260791003704 3169488.75 17575.0 ENST00000487070.5_1_2:97267510-97285240:-|nuORF;;nc|ENSG00000114982|Q9P2N6|KANSL3;;ENST00000447759.5_3_2:97261350-97293793:-|nuORF;;nc|ENSG00000114982|Q9P2N6-2|KANSL3;;nc|ENSG00000114982|Q9P2N6-4|KANSL3;;ENST00000597150.5_1_2:97261350-97297069:-|nuORF;;nc|ENSG00000114982|Q9P2N6-6|KANSL3;;nc|ENSG00000114982|Q9P2N6-8|KANSL3;;nc|ENSG00000114982|Q9P2N6-5|KANSL3;;ENSG00000114982|ENST00000431828|KANSL3 -0.5060706908504168 2.0 False 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17593 93.543 51.0 2620900.0 25 0 423630.0 + 4528 DAYLVHLI 8 98 472.2661549896553 942.5177570461108 2 472.2662231326103 MULTI CID FTMS 0 0 0 17592 2740541.75 1.0 0 0.0 1 Unmodified _DAYLVHLI_ ENSG00000105671|ENST00000247003|DDX49;ENST00000595858.5_1_19:19032475-19037138:+|nuORF;ENST00000601803.5_1_19:19032987-19035509:+|nuORF;nc|ENSG00000105671|Q9Y6V7-2|DDX49 52.69307289633392 0.1265801145616722 4 {[DA]|[EG]}Y{I|L}VH{I|L}{I|L} 8 0 + 56.279 0.0 0.0 5.9711 5.9711 74.272 0.0 0.0 0.0 23.091092062267407 7.466398379225907 7.466398379225907 1.2493873660830062 0 1.110924374808178 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}Y{I|L}VH{I|L}{I|L};{[DA]|[EG]}Y{I|L}V{I|L}H{I|L} 5.9711;5.8385 +;- + 142 + 1 1.403 105914.8 1.0 12561 5030 17592 HBL1_DMSO_200M_050219_2,17593 HBL1_DMSO_200M_050219_2,17593,DAYLVHLI True True DAYLVHLI 93.543365 472.26622313261 77643636.0 17592.0 ENST00000595858.5_1_19:19032475-19037138:+|nuORF;;nc|ENSG00000105671|Q9Y6V7-2|DDX49;;ENST00000601803.5_1_19:19032987-19035509:+|nuORF;;ENSG00000105671|ENST00000247003|DDX49 6.097089926401774 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17594 93.547 186.0 1228900.0 25 0 86286.0 + 44584 YPFINSRIITV 11 113 661.8768817256396 1321.739210518079 2 661.8775512576103 MULTI CID FTMS 0 0 0 17592 1316679.125 0.6450841318521525 -2 0.2074508666992187 2 Unmodified _YPFINSRIITV_ ENSG00000037474|ENST00000264670|NSUN2;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 89.60864043982822 0.000670653681945 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}PP{I|L}{I|L}YTV 11 4 + 90.998 0.0 0.0 6.8847 6.8847 60.058 0.0 0.0 0.0 2.1932890090214414 37.51139416000356 2.1932890090214414 0.0 0 1.8807196863200843 2.0 0.7302046884880937 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}PP{I|L}{I|L}YTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}PP{I|L}Y{I|L}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}PP{I|L}{I|L}TYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}PPY{I|L}{I|L}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}P{I|L}PY{I|L}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}P{I|L}P{I|L}YTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}P{I|L}P{I|L}TYV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}P{I|L}{M(Oxidation (M))|F}{I|L}{I|L}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}{I|L}TV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{I|L}P{I|L}{I|L}PYTV 6.8847;6.8847;6.8611;6.7515;6.657;6.657;6.6334;6.5238;6.4292;6.4292 -;-;-;-;-;-;-;-;-;- 2817 1 1.403 170126.1 1.0 12562 5030 17592 HBL1_DMSO_200M_050219_2,17594 HBL1_DMSO_200M_050219_2,17594,YPFINSRIITV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17595 93.549 66.0 1145500.0 25 0 198770.0 + 20424 LLIENVASL 9 116 486.29226213170926 970.5699713302186 2 486.2924072146416 MULTI CID FTMS 0 0 0 17592 1084597.0 0.0828619398304221 -2 0.2074508666992187 3 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 32.30548876998284 0.1201446275138228 4 {I|L}{I|L}ENV{I|L}AS{I|L} 9 2 {I|L}{I|L}ENV{I|L} + + 31.198 32.401 4.755 3.2144 3.2144 46.417 0.0 0.0 0.0 0.0 9.29429264381788 0.0 0.0 0 0.5 0.0 0.6505149978319906 0.0 {I|L}{I|L}ENV{I|L}AS{I|L} 3.2144 - 1420 + 1 1.403 61852.5 1.0 12563 5030 17592 HBL1_DMSO_200M_050219_2,17595 HBL1_DMSO_200M_050219_2,17595,LLIENVASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17596 93.551 93.0 1191900.0 25 0 151870.0 + 12098 GQIDLLERL 9 100 528.8060824149661 1055.597611896732 2 528.8061401247978 MULTI CID FTMS 0 0 0 17592 825537.875 0.243339889404073 -2 0.2074508666992187 4 Unmodified _GQIDLLERL_ ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC 65.47368725323818 0.0230515101691092 4 {[QG]|[NA]}{I|L}D{I|L}{I|L}ER{I|L} 9 0 + 83.055 0.0 0.0 7.8681 7.8681 84.3 0.0 0.0 0.0 57.03389693021863 12.587418566968154 12.587418566968154 3.3226467981605623 0 1.5356668758921828 0.7958800173440752 0.4247425010840047 0.5649093276264391 + + {[QG]|[NA]}{I|L}D{I|L}{I|L}ER{I|L};{[QG]|[NA]}{I|L}{I|L}D{I|L}ER{I|L};{[QG]|[NA]}{I|L}D{I|L}{I|L}{I|L}WV;{[QG]|[NA]}{I|L}{I|L}D{I|L}{I|L}WV;{[QG]|[NA]}{I|L}D{I|L}{I|L}[NG]KV;{[QG]|[NA]}{I|L}{I|L}D{I|L}[NG]KV;{[QG]|[NA]}{I|L}{I|L}[PG][VP]Y{I|L};{[QG]|[NA]}{I|L}{I|L}[PG][Y{I|L}]PV 7.8681;7.5533;5.6695;5.3547;4.9235;4.6088;2.5461;1.4466 +;-;-;-;-;-;-;- + 393 + 1 1.403 91243.0 1.0 12564 5030 17592 HBL1_DMSO_200M_050219_2,17596 HBL1_DMSO_200M_050219_2,17596,GQIDLLERL True True GQIDLLERL 93.550604 528.806140124798 53335028.0 17592.0 ENSG00000134982|ENST00000257430|APC;;nc|ENSG00000134982|P25054-3|APC;;nc|ENSG00000134982|P25054-2|APC 3.855529228846232 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17597 93.552 57.0 569030.0 25 0 45948.0 + 41971 VQLPDGGWGL 10 66 521.2710401900581 1040.527527446916 2 521.2717162966728 MULTI CID FTMS 0 0 0 17592 623012.375 0.7369873814119328 -1 0.0988235473632812 5 Unmodified _VQLPDGGWGL_ ENSG00000160285|ENST00000397728|LSS;nc|ENSG00000160285|P48449-2|LSS 24.020572477871973 0.4289996903560794 4 PG{I|L} 3 7 17.792 0.0 0.0 1.7099 0.0 0.0 755.3574357494537 0.0 755.3574357494537 0.0 5.518703090271801 0.0 0.0 0 0.0 0.0 0.0 0.0 PG{I|L} 1.7099 - 71 + 1 1.403 31242.0 1.0 12565 5030 17592 HBL1_DMSO_200M_050219_2,17597 HBL1_DMSO_200M_050219_2,17597,VQLPDGGWGL False True VQLPDGGWGL 93.552056 521.271716296673 15035932.0 17592.0 nc|ENSG00000160285|P48449-2|LSS;;ENSG00000160285|ENST00000397728|LSS 6.001813411712647 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17598 93.56 419.0 590480.0 25 0 147730.0 -1 0 145 1086.8603700455958 3257.559280736988 3 1087.196093738079 MULTI CID FTMS 0 0 0 17592 439340.53125 1.0 0 0.0 6 4 WN[{I|L}P]NVN{M(Oxidation (M))|F}{I|L} 9 -1 46.743 0.0 0.0 1.4349 0.0 0.0 2142.0465264561744 0.0 2142.0465264561744 0.0 17.022182094108164 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.4247425010840047 WN[{I|L}P]NVN{M(Oxidation (M))|F}{I|L} 1.4349 - 4862 1 1.403 157991.8 1.0 12566 5030 17592 HBL1_DMSO_200M_050219_2,17598 HBL1_DMSO_200M_050219_2,17598, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17599 93.566 372.0 894500.0 25 0 126080.0 + 3755 DAHEFLNYL 9 170 561.2653246205543 1120.5160963079086 2 561.2654907107353 MULTI CID FTMS 0 0 0 17592 405268.09375 1.0 0 0.0 7 Unmodified _DAHEFLNYL_ ENSG00000109189|ENST00000441222|USP46;ENSG00000152484|ENST00000282344|USP12;ENST00000514536.5_1_4:53464769-53497293:-|nuORF;nc|ENSG00000109189|P62068-2|USP46;nc|ENSG00000109189|P62068-3|USP46;nc|ENSG00000109189|P62068-4|USP46 58.6788170122104 0.0268135626297836 4 {[DA]|[EG]}HE{M(Oxidation (M))|F}{I|L}NY{I|L} 9 0 + 70.817 0.0 0.0 6.32 6.32 74.83 0.0 0.0 0.0 0.8728261336168686 16.478174818886373 0.8728261336168686 0.8728261336168686 0 0.7302046884880937 0.8538719643217619 0.841129063296272 0.2742275032520141 + + {[DA]|[EG]}HE{M(Oxidation (M))|F}{I|L}NY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DV[YT]NY{I|L};[YV][CS]{M(Oxidation (M))|F}{I|L}NY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VD[YT]NY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VT{[YD]|[{M(Oxidation (M))|F}M]}NY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VS[YE]NY{I|L};{[DA]|[EG]}HE{M(Oxidation (M))|F}{I|L}GGY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DV[YT]GGY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[YK]ADY{I|L};[YV][CS]{M(Oxidation (M))|F}{I|L}GGY{I|L} 6.32;6.2421;6.2068;5.4879;5.4526;5.3308;5.2535;5.1756;5.1675;5.1403 +;-;-;-;-;-;-;-;-;- + 6039 1 1.403 250644.9 1.0 12567 5030 17592 HBL1_DMSO_200M_050219_2,17599 HBL1_DMSO_200M_050219_2,17599,DAHEFLNYL True True DAHEFLNYL 93.566271 561.265490710735 3303867.75 17592.0 nc|ENSG00000109189|P62068-3|USP46;;ENST00000514536.5_1_4:53464769-53497293:-|nuORF;;ENSG00000152484|ENST00000282344|USP12;;nc|ENSG00000109189|P62068-4|USP46;;ENSG00000109189|ENST00000441222|USP46;;nc|ENSG00000109189|P62068-2|USP46 6.308300971984863 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17600 93.57 174.0 637690.0 25 0 152130.0 + 13593 HPLVILNI 8 102 459.7921069692591 917.5696610053184 2 459.7920104861259 MULTI CID FTMS 0 0 0 17592 407396.0 0.0335475020082173 -3 0.3552017211914062 8 Unmodified _HPLVILNI_ ENSG00000168090|ENST00000303904|COPS6;ENST00000465027.1_1_7:99686595-99687052:+|nuORF;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 45.7499826716795 0.1592378023510922 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L} 8 0 + 68.722 0.0 0.0 7.4895 7.4895 87.811 0.0 0.0 0.0 11.607182284244963 43.52736192306196 11.607182284244963 6.7609125905568135 0 0.3807196863200844 0.0 2.1549471895720984 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}{I|L}N;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}GG{I|L};[{I|L}P]HV{I|L}{I|L}N{I|L};[{I|L}P]VH{I|L}{I|L}N{I|L};[{I|L}P]HV{I|L}{I|L}{I|L}N;[{I|L}P]VH{I|L}{I|L}{I|L}N;[{I|L}P]V{I|L}H{I|L}N{I|L};[{I|L}P]V{I|L}H{I|L}{I|L}N;[{I|L}P]V{I|L}{I|L}HN{I|L} 7.4895;6.7527;6.4801;4.8628;4.8628;4.6709;4.6709;4.5347;4.3428;3.8786 +;-;-;-;-;-;-;-;-;- + 289 1 1.403 86732.0 1.0 12568 5030 17592 HBL1_DMSO_200M_050219_2,17600 HBL1_DMSO_200M_050219_2,17600,HPLVILNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17601 93.572 139.0 732180.0 25 0 76882.0 + 44754 YPLEVTKLI 9 128 538.3234302040236 1074.632307474847 2 538.3236572146416 MULTI CID FTMS 0 0 0 17592 350038.59375 0.7546011786379253 -1 0.0988235473632812 9 Unmodified _YPLEVTKLI_ ENSG00000104884|ENST00000391945|ERCC2;nc|ENSG00000104884|P18074-2|ERCC2 65.47368725323818 0.0230515101691092 4 YP{I|L}EVTK{I|L}{I|L} 9 0 + 76.325 0.0 0.0 7.1024 7.1024 85.772 0.0 0.0 0.0 2.374861523611344 17.305037911252512 2.374861523611344 5.939783354292047 0 2.2376954943324545 1.6989700043360187 0.5 0.0 + + YP{I|L}EVTK{I|L}{I|L};[{I|L}V]ETK{I|L}PY{I|L};YP{I|L}EV[K{I|L}]T{I|L};[{I|L}V]ETKP{I|L}Y{I|L};[{I|L}V]ETK{I|L}{M(Oxidation (M))|F}{I|L}{I|L};YP{I|L}M{I|L}{[NV]|[RG]}{I|L}{I|L};[{I|L}V][KT]E{I|L}PY{I|L};{[QN]|[E{I|L}]|[KN]}VTK{I|L}PY{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}TK{I|L}PY{I|L};[{I|L}V]E{I|L}[KT]PY{I|L} 7.1024;6.5497;6.0844;5.6868;5.4951;5.3838;5.2914;5.2717;5.1539;4.9662 +;-;-;-;-;-;-;-;-;- + 1845 + 1 1.403 86085.7 1.0 12569 5030 17592 HBL1_DMSO_200M_050219_2,17601 HBL1_DMSO_200M_050219_2,17601,YPLEVTKLI True True YPLEVTKLI 93.572479 538.323657214642 3402611.75 17592.0 nc|ENSG00000104884|P18074-2|ERCC2;;ENSG00000104884|ENST00000391945|ERCC2 2.7458900610605874 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17602 93.579 343.0 632080.0 25 0 48454.0 -1 LLLFCACI 8 189 505.2640395103344 1008.5135260874688 2 505.2634765505791 MULTI CID FTMS 0 0 0 17592 316739.625 0.1090472316502442 3 -0.356536865234375 10 2 Carbamidomethyl (C) _LLLFC(Carbamidomethyl (C))AC(Carbamidomethyl (C))I_ chr6:132684505-132686599|40|20.88|0.61|5.1|-|2|TE_info:HAL1,HAL1_dup9460,L1,LINE,donor,+,132686599,132687118|VNN1,None|4 52.33426049586781 0.1282678332820461 4 {I|L}{I|L}H[PA]DAC(Carbamidomethyl (C)){I|L} 9 -1 + 61.38 0.0 0.0 6.0862 6.0862 81.775 0.0 0.0 0.0 39.13380425640881 13.46787486224656 13.46787486224656 5.698753079565613 0 0.6989700043360187 1.3010299956639813 0.4247425010840047 0.0 {I|L}{I|L}H[PA]DAC(Carbamidomethyl (C)){I|L};{I|L}{I|L}H[PA]QDC{I|L};{I|L}{I|L}H[PA]DACG{I|L};{I|L}{I|L}H[PA]DAGC{I|L};{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))R]T{I|L};{I|L}{I|L}H[PA]DQC{I|L};{I|L}{I|L}H[PA][AG]DC{I|L};{[DA]|[EG]}YQV{I|L}TS{I|L};{I|L}S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[C(Carbamidomethyl (C))R]T{I|L};{I|L}[YR]VDAC(Carbamidomethyl (C)){I|L} 6.0862;5.5211;5.3836;5.3308;5.2141;4.6831;4.6081;4.5113;4.4894;4.4788 -;-;-;-;-;-;-;-;-;- 2914 + 1 1.403 164994.0 1.0 12570 5030 17592 HBL1_DMSO_200M_050219_2,17602 HBL1_DMSO_200M_050219_2,17602,LLLFCACI False False False False TE_chimeric_transcript PXD020620_cell_line HBL1_DMSO_200M_050219_2 17603 93.582 185.0 343000.0 25 0 50934.0 + 40681 VLFFLLFAR 9 80 375.8971527954855 0 375.8965637087822 PEAK CID FTMS 0 0 0 17592 219267.5625 1.0 0 0.0 11 Unmodified _VLFFLLFAR_ REV__ENST00000331148.5_1_12:7308690-7310592:+|nuORF;REV__nc|ENSG00000139182|Q9BQT9-3|CLSTN3 7.608950283845883 0.3396988645791728 4 {I|L}{I|L}{I|L}H 4 -1 20.433 0.0 0.0 2.7252 0.0 0.0 99.35742255568556 171.08924280338127 270.44666535906686 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L}H 2.7252 - 27 + 1 1.403 59449.5 1.0 12571 5030 17592 HBL1_DMSO_200M_050219_2,17603 HBL1_DMSO_200M_050219_2,17603,VLFFLLFAR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17604 93.587 257.0 622500.0 25 0 79693.0 + 23198 LSSGWFILL 9 184 518.2965026569888 1034.5784523807774 2 518.2961303591728 MULTI CID FTMS 0 0 0 17592 162777.015625 0.6212763894279362 -1 0.0988235473632812 12 Unmodified _LSSGWFILL_ REV__ENSG00000179104|ENST00000321196|TMTC2;REV__ENST00000551915.5_1_12:83081308-83379891:+|nuORF 36.04419817259434 0.0971720506436186 4 {[VA]|[{I|L}G]}V{M(Oxidation (M))|F}{[WT]|[RM]}S{I|L}{I|L} 9 -1 + 43.381 0.0 0.0 4.1931 4.1931 66.923 0.0 0.0 0.0 10.870827893812418 19.780156171532184 10.870827893812418 1.249387366082999 0 0.0 2.0 0.25 0.0 {[VA]|[{I|L}G]}V{M(Oxidation (M))|F}{[WT]|[RM]}S{I|L}{I|L};{[VA]|[{I|L}G]}A[WY]{I|L}S{I|L}{I|L};{[VA]|[{I|L}G]}V{M(Oxidation (M))|F}{[WT]|[RM]}{I|L}S{I|L};{[VA]|[{I|L}G]}A[WY]{I|L}{I|L}S{I|L};{[VA]|[{I|L}G]}V{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}A[WY]S{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}V{M(Oxidation (M))|F}Y[NP]{I|L}{I|L};{[VA]|[{I|L}G]}V{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}{I|L};[KP]{I|L}{M(Oxidation (M))|F}Y[PA]S{I|L};[{M(Oxidation (M))|F}E][WK]{I|L}S{I|L}{I|L} 4.1931;4.0723;3.9008;3.78;3.6111;3.4904;3.3695;3.0785;2.9547;2.5271 -;-;-;-;-;-;-;-;-;- 2060 1 1.403 123071.9 1.0 12572 5030 17592 HBL1_DMSO_200M_050219_2,17604 HBL1_DMSO_200M_050219_2,17604,LSSGWFILL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17605 93.591 194.0 183420.0 25 0 18988.0 + 41036 VMHPFWNTI 9 77 572.784390900538 0 572.7844726443291 PEAK CID FTMS 0 0 0 17592 162659.4375 1.0 0 0.0 13 Unmodified _VMHPFWNTI_ ENSG00000138018|ENST00000260585|SELENOI;ENST00000260585.11_1_2:26569100-26611935:+|nuORF 32.116972079565 0.1004713836468113 4 NW 2 8 14.464 0.0 0.0 1.2648 0.0 0.0 232.14780904541345 608.2666720025999 840.4144810480134 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 NW 1.2648 - 85 + 1 1.403 33421.6 1.0 12573 5030 17592 HBL1_DMSO_200M_050219_2,17605 HBL1_DMSO_200M_050219_2,17605,VMHPFWNTI True True VMHPFWNTI 93.590768 572.784472644329 1543534.375 17592.0 ENSG00000138018|ENST00000260585|SELENOI;;ENST00000260585.11_1_2:26569100-26611935:+|nuORF 7.351047356923421 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17606 93.594 97.0 536130.0 25 0 76293.0 + 43968 YIAGEVGHSL 10 56 523.2694526492991 1044.524352365398 2 523.2717162966728 MULTI CID FTMS 0 0 0 17592 136319.21875 0.7074359088088377 3 -0.356536865234375 14 Unmodified _YIAGEVGHSL_ REV__ENSG00000106144|ENST00000310447|CASP2;REV__ENST00000472067.1_1_7:142991698-142998016:+|nuORF;REV__ENST00000493642.5_1_7:142986735-143000877:+|nuORF;REV__nc|ENSG00000106144|P42575-2|CASP2 15.847184025352805 0.5816416552707754 4 [Y{I|L}]{M(Oxidation (M))|F}V 4 -1 40.445 0.0 0.0 3.8721 0.0 0.0 0.0 519.2197212693883 519.2197212693883 27.971062485323515 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [Y{I|L}]{M(Oxidation (M))|F}V 3.8721 - 27 + 1 1.403 48503.5 1.0 12574 5030 17592 HBL1_DMSO_200M_050219_2,17606 HBL1_DMSO_200M_050219_2,17606,YIAGEVGHSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17607 93.608 800.0 175780.0 25 0 15782.0 + -1 LPCTPVLVV 9 145 939.9568481034072 1877.899143273614 2 940.4599487185478 MULTI CID FTMS 0 0 0 17592 125768.9296875 0.5374482555224546 6 -0.694305419921875 15 ENSG00000168421|ENST00000381799|RHOH;chr4:40242846-40243178|48|30.71|0.71|5.43|+|ENST00000614836|RHOH,RHOH;chr4:40240345-40242714|47|17.98|0.34|5.71|+|ENST00000515702|RHOH,RHOH 4 [{I|L}T]{[CP]|[EA]}VP{I|L}VV 9 -1 42.171 0.0 0.0 2.2456 0.0 0.0 0.0 953.333932662539 953.333932662539 7.676310598412087 0.0 0.0 0.0 0 0.0 2.0 1.5303695511246982 0.0 [{I|L}T]{[CP]|[EA]}VP{I|L}VV 2.2456 - 4385 1 1.403 94055.8 0.7200000286102295 12575 5030 17592 HBL1_DMSO_200M_050219_2,17607 HBL1_DMSO_200M_050219_2,17607, False False LPCTPVLVV 93.607898 939.9589 5301683.5 17592.0 ENSG00000168421|ENST00000381799|RHOH;;chr4:40242846-40243178|48|30.71|0.71|5.43|+|ENST00000614836|RHOH,RHOH;;chr4:40240345-40242714|47|17.98|0.34|5.71|+|ENST00000515702|RHOH,RHOH 4.852657159169515 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17608 93.622 800.0 135230.0 25 0 13973.0 + 35070 SQVDPEVFAAL 11 165 588.3021809122264 1174.5898088912527 2 588.3021118044853 MULTI CID FTMS 0 0 0 17592 127746.65625 1.0 0 0.0 16 Unmodified _SQVDPEVFAAL_ ENSG00000135945|ENST00000258428|REV1;ENST00000413697.5_1_2:100019089-100065949:-|nuORF;nc|ENSG00000135945|Q9UBZ9-2|REV1 28.23362336080872 0.4292685378469897 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E[HN]V{M(Oxidation (M))|F}A[{I|L}A] 10 5 + 44.019 0.0 0.0 3.7476 3.7476 63.789 0.0 0.0 0.0 0.4085942088556962 4.884381005764311 0.4085942088556962 0.4085942088556962 0 0.5 0.0 1.1237125054200234 0.2887254899964357 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E[HN]V{M(Oxidation (M))|F}A[{I|L}A];{NN|[MP]|[D{I|L}]|[EV]}P{M(Oxidation (M))|F}WATAA[{I|L}A];[EP]V{M(Oxidation (M))|F}WATAA[{I|L}A];{NN|[MP]|[D{I|L}]|[EV]}P{M(Oxidation (M))|F}ADATAA[{I|L}A];[EP]V{M(Oxidation (M))|F}ADATAA[{I|L}A];[{I|L}P]D{M(Oxidation (M))|F}WATAA[{I|L}A];{NN|[MP]|[D{I|L}]|[EV]}P{M(Oxidation (M))|F}AWTAA[{I|L}A];[EP]V{M(Oxidation (M))|F}AWTAA[{I|L}A];{[MS]|[{M(Oxidation (M))|F}A]}GE[HN]V{M(Oxidation (M))|F}A[{I|L}A];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[HN]V{M(Oxidation (M))|F}A[{I|L}A] 3.7476;3.7128;3.632;3.4633;3.3825;3.3807;3.3066;3.2258;3.2103;3.1919 -;-;-;-;-;-;-;-;-;- 3928 1 1.403 84103.3 0.75 12576 5030 17592 HBL1_DMSO_200M_050219_2,17608 HBL1_DMSO_200M_050219_2,17608,SQVDPEVFAAL False True SQVDPEVFAAL 93.621731 588.302111804485 824661.3125 17592.0 ENST00000413697.5_1_2:100019089-100065949:-|nuORF;;ENSG00000135945|ENST00000258428|REV1;;nc|ENSG00000135945|Q9UBZ9-2|REV1 5.138711611429851 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17610 93.626 1.8 32974000.0 25 0 5892600.0 + 4671 DAYVLPKLYV 10 82 590.8342673449122 1179.6539817566245 2 590.8350707888603 MULTI CID FTMS 0 0 0 17609 33648128.0 0.9631085710726656 -1 0.0827713012695312 1 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 38.17557092003332 0.1768326257063233 4 {[DA]|[EG]}YV 4 6 37.167 0.0 0.0 3.1507 0.0 0.0 0.0 728.4357254912524 728.4357254912524 0.1215715921996718 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YV 3.1507 + + 161 1 1.395 50972.0 1.0 12577 5031 17609 HBL1_DMSO_200M_050219_2,17610 HBL1_DMSO_200M_050219_2,17610,DAYVLPKLYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17611 93.627 13.0 3873700.0 25 0 415530.0 + 16369 IYPVNAISF 9 64 512.2792297186097 1022.5439065040194 2 512.2794067263603 MULTI CID FTMS 0 0 0 17609 4130736.5 0.7803958886703981 3 -0.41729736328125 2 Unmodified _IYPVNAISF_ ENSG00000154473|ENST00000368865|BUB3;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3 30.22481116460888 0.1466181017706357 4 [VP]NA{I|L}Y 6 4 41.432 0.0 0.0 4.0518 0.0 0.0 0.0 362.1689969789183 362.1689969789183 14.749321833847873 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 1.079689690656103 [VP]NA{I|L}Y 4.0518 - 114 1 1.395 46756.2 1.0 12578 5031 17609 HBL1_DMSO_200M_050219_2,17611 HBL1_DMSO_200M_050219_2,17611,IYPVNAISF False True IYPVNAISF 93.627312 512.27940672636 99640128.0 17609.0 nc|ENSG00000154473|O43684-2|BUB3;;ENST00000481952.1_1_10:124921781-124922345:+|nuORF;;ENSG00000154473|ENST00000368865|BUB3 4.813828945159912 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17612 93.63 116.0 607010.0 25 0 84060.0 + 35882 SVLPDSVEIGL 11 90 564.8107477463241 1127.606942559448 2 564.8111450076103 MULTI CID FTMS 0 0 0 17609 510982.0625 0.4430473908274699 -1 0.0827713012695312 3 Unmodified _SVLPDSVEIGL_ ENSG00000020129|ENST00000373243|NCDN;nc|ENSG00000020129|Q9UBB6-2|NCDN 25.997395711884035 0.4817758527606796 4 [DP]SVE{I|L}W 7 5 50.31 0.0 0.0 4.4616 0.0 0.0 0.0 298.1766196436856 298.1766196436856 23.767507096020992 0.0 0.0 0.0 0 0.4247425010840047 0.0 2.0356668758921828 0.0 [DP]SVE{I|L}W 4.4616 - 487 1 1.395 60956.6 1.0 12579 5031 17609 HBL1_DMSO_200M_050219_2,17612 HBL1_DMSO_200M_050219_2,17612,SVLPDSVEIGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17613 93.634 201.0 471020.0 25 0 70000.0 + 4494 DAYIMKELL 9 106 548.2909600920862 1094.5673672509722 2 548.2906371951103 MULTI CID FTMS 0 0 0 17609 426898.15625 1.0 0 0.0 4 Unmodified _DAYIMKELL_ ENSG00000100077|ENST00000324198|GRK3;ENST00000455558.2_3_22:26000393-26080524:+|nuORF 53.40400417844725 0.0329064971918313 4 {[DA]|[EG]}V{I|L}HEW{I|L}{I|L} 9 4 + 58.034 0.0 0.0 5.302 5.302 77.795 0.0 0.0 0.0 4.881062318217111 5.593506593554807 4.881062318217111 4.881062318217111 0 1.0297966019298022 1.6989700043360187 0.4247425010840047 0.0 {[DA]|[EG]}V{I|L}HEW{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{I|L}YW{I|L}{I|L};{[DA]|[EG]}V{I|L}HE{I|L}DA{I|L};{[QN]|[E{I|L}]|[KN]}KMYW{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}EYW{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KEYW{I|L}{I|L};[Y{I|L}][QP]YW{I|L}{I|L};{[DA]|[EG]}V{I|L}HE{I|L}W{I|L};{[DA]|[EG]}V{I|L}HE{[DA]|[EG]}{I|L}{I|L};[Y{I|L}][QP]{I|L}YDA{I|L} 5.302;4.856;4.635;4.5988;4.581;4.5732;4.56;4.4742;4.4607;4.4371 -;-;-;-;-;-;-;-;-;- 962 1 1.395 78160.5 1.0 12580 5031 17609 HBL1_DMSO_200M_050219_2,17613 HBL1_DMSO_200M_050219_2,17613,DAYIMKELL True True DAYIMKELL 93.633589 548.29063719511 3437425.0 17609.0 ENSG00000100077|ENST00000324198|GRK3;;ENST00000455558.2_3_22:26000393-26080524:+|nuORF 5.954367637634277 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17614 93.638 228.0 528130.0 25 0 110250.0 + 28953 QDDSMVKSSL 10 110 555.261248922605 1108.50794491201 2 555.2618286013603 MULTI CID FTMS 0 0 0 17609 353277.03125 0.5624998818263447 -1 0.0827713012695312 5 Unmodified _QDDSMVKSSL_ REV__ENSG00000254535|ENST00000421491|PABPC4L 10.799506525563784 0.666336781075408 4 YMATT{I|L}K 7 -1 54.034 0.0 0.0 4.8745 0.0 0.0 282.0812170018257 0.0 282.0812170018257 0.0 28.71678028479237 0.0 0.0 0 0.8494850021680094 0.0 1.055462187404089 0.1989700043360188 YMATT{I|L}K 4.8745 - 297 + 1 1.395 96239.6 1.0 12581 5031 17609 HBL1_DMSO_200M_050219_2,17614 HBL1_DMSO_200M_050219_2,17614,QDDSMVKSSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17615 93.64 112.0 531850.0 25 0 37483.0 + 5869 DPYGFLTTV 9 103 506.75213521769007 1011.4897175021802 2 506.7533447146416 MULTI CID FTMS 0 0 0 17609 362696.03125 0.9449795620204988 -1 0.0827713012695312 6 Unmodified _DPYGFLTTV_ ENSG00000188725|ENST00000339020|SMIM15 32.30548876998284 0.1201446275138228 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DG{M(Oxidation (M))|F}{I|L} 6 5 33.109 0.0 0.0 3.2733 0.0 0.0 0.0 316.1449658754802 316.1449658754802 15.138050198288012 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DG{M(Oxidation (M))|F}{I|L} 3.2733 - 317 1 1.395 51802.8 1.0 12582 5031 17609 HBL1_DMSO_200M_050219_2,17615 HBL1_DMSO_200M_050219_2,17615,DPYGFLTTV True True DPYGFLTTV 93.640226 506.753344714642 4006421.25 17609.0 ENSG00000188725|ENST00000339020|SMIM15 5.74014679590861 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17616 93.645 236.0 330880.0 25 0 55081.0 + 21788 LPNGGFITI 9 98 466.26559770445743 0 466.2658264040947 PEAK CID FTMS 0 0 0 17609 283553.03125 1.0 0 0.0 7 Unmodified _LPNGGFITI_ ENST00000368865.8_1_10:124923375-124923471:+|nuORF 42.09456458481378 0.053291022336892 4 {I|L}{I|L}{M(Oxidation (M))|F}N 4 7 25.578 0.0 0.0 2.7488 0.0 0.0 232.1404960907524 208.07326685123283 440.2137629419853 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.8807196863200843 {I|L}{I|L}{M(Oxidation (M))|F}N 2.7488 - 184 + 1 1.395 68821.2 1.0 12583 5031 17609 HBL1_DMSO_200M_050219_2,17616 HBL1_DMSO_200M_050219_2,17616,LPNGGFITI True True LPNGGFITI 93.644647 466.265826404095 3683414.5 17609.0 ENST00000368865.8_1_10:124923375-124923471:+|nuORF 2.941240151723226 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17617 93.658 800.0 299430.0 25 0 51741.0 + 10204 FQIEDVIHKF 10 149 425.8958629534985 0 425.8958618044853 PEAK CID FTMS 0 0 0 17609 229117.703125 0.9532186422585344 -1 0.0827713012695312 8 Unmodified _FQIEDVIHKF_ chr14:55148473-55148594|47|21.74|0.62|5.14|-|ENST00000395425|DLGAP5,DLGAP5;chr14:55148684-55150799|48|24.25|0.53|5.5|-|ENST00000395425|DLGAP5,DLGAP5;ENSG00000126787|ENST00000247191|DLGAP5;nc|ENSG00000126787|Q15398-1|DLGAP5;nc|ENSG00000126787|Q15398-3|DLGAP5 59.36838082759317 0.0249210186886694 4 DV{I|L}HP 5 6 24.737 0.0 0.0 2.911 0.0 0.0 92.36384194080922 193.0988405817016 285.4626825225108 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 DV{I|L}HP 2.911 - 328 + 1 1.395 196343.8 0.7699999809265137 12584 5031 17609 HBL1_DMSO_200M_050219_2,17617 HBL1_DMSO_200M_050219_2,17617,FQIEDVIHKF True True FQIEDVIHKF 93.658464 425.895861804485 4184892.875 17609.0 nc|ENSG00000126787|Q15398-1|DLGAP5;;ENSG00000126787|ENST00000247191|DLGAP5;;chr14:55148684-55150799|48|24.25|0.53|5.5|-|ENST00000395425|DLGAP5,DLGAP5;;nc|ENSG00000126787|Q15398-3|DLGAP5;;chr14:55148473-55148594|47|21.74|0.62|5.14|-|ENST00000395425|DLGAP5,DLGAP5 7.658905982971191 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17618 93.672 800.0 252430.0 25 0 20817.0 + 29477 QLIPAVPGI 9 158 454.2839574945136 906.5533620558272 2 454.2841979861259 MULTI CID FTMS 0 0 0 17609 186976.859375 0.8901206840019685 3 -0.41729736328125 9 Unmodified _QLIPAVPGI_ ENSG00000030066|ENST00000378460|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;nc|ENSG00000030066|Q12769|NUP160 36.04419817259434 0.0971720506436186 4 [PG]Q{I|L}{I|L}{M(Oxidation (M))|F}P 7 7 30.447 0.0 0.0 3.3586 0.0 0.0 0.0 151.14495076115853 151.14495076115853 1.5977317351545717 0.0 0.0 0.0 0 0.0 0.5376020021010439 0.0 0.2887254899964357 [PG]Q{I|L}{I|L}{M(Oxidation (M))|F}P 3.3586 - 1502 1 1.395 158077.5 0.6899999976158142 12585 5031 17609 HBL1_DMSO_200M_050219_2,17618 HBL1_DMSO_200M_050219_2,17618,QLIPAVPGI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17619 93.686 800.0 160290.0 25 0 12398.0 + 29293 QIFNGTFVKL 10 136 583.8321631749548 1165.6497734167094 2 583.8329955935478 MULTI CID FTMS 0 0 0 17609 152103.75 0.0098722724300969 12 -1.2804031372070312 10 Unmodified _QIFNGTFVKL_ ENSG00000147604|ENST00000352983|RPL7;ENST00000397636.2_1_7:99737498-99738123:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF 70.33199760932243 0.018925923965799 4 [Q{I|L}]{M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L} 10 0 [Q{I|L}] + + 47.068 20.543 8.5191 4.0379 4.0379 48.768 0.0 0.0 0.0 0.0 15.064775606121948 0.0 0.0 0 0.9436726795685344 0.0 0.2614393726401688 0.8921590589602533 + + [Q{I|L}]{M(Oxidation (M))|F}N{[SA]|[TG]}{M(Oxidation (M))|F}VK{I|L} 4.0379 + + 1029 + 1 1.395 100870.7 0.7300000190734863 12586 5031 17609 HBL1_DMSO_200M_050219_2,17619 HBL1_DMSO_200M_050219_2,17619,QIFNGTFVKL True True QIFNGTFVKL 93.68611 583.832995593548 428972192.0 17609.0 ENST00000397636.2_1_7:99737498-99738123:-|nuORF;;ENST00000461190.1_1_3:123871117-123871351:-|nuORF;;ENSG00000147604|ENST00000352983|RPL7 6.88736089070638 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17620 93.694 470.0 243260.0 25 0 24455.0 + 17219 KLLEYIEEI 9 154 575.3231961134347 1148.6318392936694 2 575.3225585818291 MULTI CID FTMS 0 0 0 17609 148324.75 0.0552625539260231 4 -0.5313873291015625 11 Unmodified _KLLEYIEEI_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 34.221707139014875 0.1071766711162635 4 {[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L} 9 4 + 70.462 0.0 0.0 6.1344 6.1344 87.387 0.0 0.0 0.0 10.58786864425592 16.47817481888638 10.58786864425592 9.842757820673022 0 0.2887254899964357 1.0969100130080565 0.8012038525793941 0.0 {[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]Y{I|L}EE{I|L};[Y{I|L}]E{I|L}K{I|L}EE{I|L};{I|L}{I|L}KEY{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}K{[WN]|[YH]}A{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}E[K{I|L}]E{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}E[VS]{I|L}A{I|L};{[QN]|[E{I|L}]|[KN]}YW{[QN]|[E{I|L}]|[KN]}{I|L}A{I|L};{[QN]|[E{I|L}]|[KN]}[K{I|L}]Y{[WN]|[YH]}A{I|L};{[QN]|[E{I|L}]|[KN]}EY{I|L}[K{I|L}]E{I|L} 6.1344;5.2775;5.2127;4.4369;4.274;3.7119;3.5284;3.4393;3.4171;3.3333 -;-;-;-;-;-;-;-;-;- 1718 1 1.395 86966.7 1.0 12587 5031 17609 HBL1_DMSO_200M_050219_2,17620 HBL1_DMSO_200M_050219_2,17620,KLLEYIEEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17621 93.698 158.0 496340.0 25 0 66642.0 + 36273 SYFTQTAML 9 114 531.2534079903674 0 531.2529174685478 PEAK CID FTMS 0 0 0 17609 143428.375 1.0 0 0.0 12 Unmodified _SYFTQTAML_ REV__ENSG00000165282|ENST00000378617|PIGO;REV__ENST00000465745.6_1_9:35090240-35092764:-|nuORF;REV__nc|ENSG00000165282|Q8TEQ8-2|PIGO 13.50788311687929 0.2720325786695375 4 {I|L}YADY{I|L}P 7 -1 26.19 0.0 0.0 2.4696 0.0 0.0 96.98421968991586 125.07253442935782 222.05675411927368 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}YADY{I|L}P 2.4696 - 1033 + 1 1.395 67434.4 1.0 12588 5031 17609 HBL1_DMSO_200M_050219_2,17621 HBL1_DMSO_200M_050219_2,17621,SYFTQTAML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17622 93.713 800.0 260270.0 25 0 20678.0 + 4724 DEEDESLTL 9 190 525.7263099168763 0 525.7266113162041 PEAK CID FTMS 0 0 0 17609 138629.796875 1.0 0 0.0 13 Unmodified _DEEDESLTL_ REV__ENSG00000148143|ENST00000277225|ZNF462;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462 16.942295170755138 0.2326366549411506 4 VT 2 -1 16.766 0.0 0.0 1.5976 0.0 0.0 115.02456131834464 731.2745496756324 846.2991109939771 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 VT 1.5976 - 348 + 1 1.395 165648.7 0.6899999976158142 12589 5031 17609 HBL1_DMSO_200M_050219_2,17622 HBL1_DMSO_200M_050219_2,17622,DEEDESLTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17623 93.727 800.0 120270.0 25 0 6900.5 -1 0 117 1029.4747902600336 3085.402541380301 3 1030.147387683392 MULTI CID FTMS 0 0 0 17609 111429.7578125 0.9488366928881066 -1 0.0827713012695312 14 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EVHN{I|L}NPMN{[MG]|[TS]}V 14 -1 55.187 0.0 0.0 1.7886 0.0 0.0 0.0 1452.661787155823 1452.661787155823 39.81508216873415 0.0 0.0 0.0 0 1.0 0.0 0.2742275032520141 0.7742275032520141 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EVHN{I|L}NPMN{[MG]|[TS]}V 1.7886 - 15786 1 1.395 66069.1 0.6499999761581421 12590 5031 17609 HBL1_DMSO_200M_050219_2,17623 HBL1_DMSO_200M_050219_2,17623, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17624 93.741 800.0 83205.0 25 0 9187.7 + 21640 LPLDRTEPLLL 11 103 640.3864048331551 1278.75825673311 2 640.8877441287041 MULTI CID FTMS 0 0 0 17609 100628.5390625 1.0 0 0.0 15 Unmodified _LPLDRTEPLLL_ REV__ENSG00000197658|ENST00000612278|SLC22A24;REV__nc|ENSG00000197658|Q8N4F4-3|SLC22A24 15.847184025352805 0.7055071256943262 4 [{I|L}P]{I|L}K 4 -1 26.287 0.0 0.0 2.0556 0.0 0.0 0.0 824.4180217079726 824.4180217079726 13.098943791441968 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}P]{I|L}K 2.0556 - 329 1 1.395 55048.3 0.6399999856948853 12591 5031 17609 HBL1_DMSO_200M_050219_2,17624 HBL1_DMSO_200M_050219_2,17624,LPLDRTEPLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17625 93.747 303.0 452290.0 25 0 43145.0 + 37473 TLFEDSFQQI 10 129 614.2986811525255 1226.582809371851 2 614.3008911013603 MULTI CID FTMS 0 0 0 17609 109709.3984375 0.1739586416849154 -2 0.1815948486328125 16 Unmodified _TLFEDSFQQI_ ENSG00000078747|ENST00000374864|ITCH;ENSG00000123124|ENST00000517970|WWP1;ENSG00000198373|ENST00000359154|WWP2;ENST00000466609.1_1_3:98377983-98378526:+|nuORF;ENST00000483727.5_1_20:33033173-33065666:+|nuORF;ENST00000518683.5_1_8:87410815-87460532:+|nuORF;nc|ENSG00000123124|Q9H0M0-3|WWP1;nc|ENSG00000123124|Q9H0M0-6|WWP1;nc|ENSG00000198373|O00308-2|WWP2;nc|ENSG00000198373|O00308-3|WWP2;nc|ENSG00000289720|Q96J02-3|ITCH;nc|ENSG00000289720|Q96J02|ITCH 68.08070601005525 0.0189984391031388 4 [{I|L}T]CD{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 7 6 36.772 0.0 0.0 2.9979 0.0 0.0 0.0 384.1869102842135 384.1869102842135 10.175900931379768 0.0 0.0 0.0 0 0.2396518287104437 2.0 1.5114393726401687 0.0 [{I|L}T]CD{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.9979 - 3121 1 1.395 106049.9 1.0 12592 5031 17609 HBL1_DMSO_200M_050219_2,17625 HBL1_DMSO_200M_050219_2,17625,TLFEDSFQQI True True TLFEDSFQQI 93.747295 614.30089110136 11587694.0 17609.0 ENST00000518683.5_1_8:87410815-87460532:+|nuORF;;nc|ENSG00000123124|Q9H0M0-6|WWP1;;ENST00000466609.1_1_3:98377983-98378526:+|nuORF;;ENSG00000078747|ENST00000374864|ITCH;;nc|ENSG00000123124|Q9H0M0-3|WWP1;;nc|ENSG00000198373|O00308-2|WWP2;;nc|ENSG00000289720|Q96J02-3|ITCH;;ENST00000483727.5_1_20:33033173-33065666:+|nuORF;;ENSG00000123124|ENST00000517970|WWP1;;nc|ENSG00000198373|O00308-3|WWP2;;ENSG00000198373|ENST00000359154|WWP2;;nc|ENSG00000289720|Q96J02|ITCH 5.424936930338542 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17626 93.761 800.0 195990.0 25 0 22791.0 + 10203 FQIEDVIHKF 10 136 638.3406122337525 1274.666671534305 2 638.3414184451103 MULTI CID FTMS 0 0 0 17609 91128.4921875 0.4479564383666438 -1 0.0827713012695312 17 Unmodified _FQIEDVIHKF_ chr14:55148473-55148594|47|21.74|0.62|5.14|-|ENST00000395425|DLGAP5,DLGAP5;chr14:55148684-55150799|48|24.25|0.53|5.5|-|ENST00000395425|DLGAP5,DLGAP5;ENSG00000126787|ENST00000247191|DLGAP5;nc|ENSG00000126787|Q15398-1|DLGAP5;nc|ENSG00000126787|Q15398-3|DLGAP5 51.41523569358685 0.0718446036348414 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EDV{I|L}HK{M(Oxidation (M))|F} 10 0 + 77.654 0.0 0.0 6.0921 6.0921 87.506 0.0 0.0 0.0 37.74810259994148 7.167730834301068 7.167730834301068 10.547635725122063 0 1.2059771852360797 1.2218487496163564 0.7614393726401688 0.2396518287104437 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EDV{I|L}HK{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EDV{I|L}{[QN]|[E{I|L}]|[KN]}G{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EDV{I|L}{[QN]|[E{I|L}]|[KN]}AV;{I|L}{I|L}CT{I|L}VDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[VP]PH{I|L}VDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{I|L}P[YG]VDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]VGHVDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]{I|L}[YG]VDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}A][{M(Oxidation (M))|F}V]{I|L}VDE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.0921;5.2646;4.9524;4.9327;4.9131;4.1037;4.0614;4.0418;4.0353;3.4529 +;-;-;-;-;-;-;-;-;- + 3304 + 1 1.395 119221.2 0.7200000286102295 12593 5031 17609 HBL1_DMSO_200M_050219_2,17626 HBL1_DMSO_200M_050219_2,17626,FQIEDVIHKF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17627 93.775 800.0 120700.0 25 0 17115.0 + 7712 ELCWNRQETL 10 118 646.3078699143236 1290.6011868954472 2 646.3063842654228 MULTI CID FTMS 0 0 0 17609 91906.4453125 0.6604079430671629 8 -0.938446044921875 18 Unmodified _ELCWNRQETL_ REV__ENST00000402364.1_1_13:23929750-23929816:-|nuORF 13.90604991867851 0.6142120002215601 4 W{M(Oxidation (M))|F}{I|L} 3 -1 34.693 0.0 0.0 2.6881 0.0 0.0 0.0 841.3183687799436 841.3183687799436 9.734068495593531 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 W{M(Oxidation (M))|F}{I|L} 2.6881 - 836 + 1 1.395 78785.7 0.699999988079071 12594 5031 17609 HBL1_DMSO_200M_050219_2,17627 HBL1_DMSO_200M_050219_2,17627,ELCWNRQETL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17629 93.779 6.5 8531500.0 25 0 749900.0 + 5654 DPFAFIHKI 9 76 544.3004480669223 1086.5863432006445 2 544.3007690310478 MULTI CID FTMS 0 0 0 17628 7514145.0 0.7447804426848291 1 -0.1206741333007812 1 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 56.17704186161178 0.0281986971544335 4 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H{I|L}K 9 2 + 84.72 0.0 0.0 7.7969 7.7969 81.361 0.0 0.0 0.0 34.67084689121528 1.8563657696191167 1.8563657696191167 1.8563657696191167 0 1.305462187404089 2.0 0.0 0.2614393726401688 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}H{I|L}K;DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L} 7.7969;7.6261 -;+ + 169 + 1 1.384 50918.6 1.0 12595 5032 17628 HBL1_DMSO_200M_050219_2,17629 HBL1_DMSO_200M_050219_2,17629,DPFAFIHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17630 93.781 48.0 1186200.0 25 0 172790.0 20793 LLVVGGGK 8 70 371.7449581964612 741.4753634597224 2 371.7446777224541 MULTI CID FTMS 0 0 0 17628 795834.625 0.2763546884842406 2 -0.2642059326171875 2 Unmodified _LLVVGGGK_ ENST00000604516.1_1_6:79943924-79944071:+|nuORF 0.7936320650641473 0.8195151834710337 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}R{I|L} 6 7 + 44.927 0.0 0.0 6.0591 6.0591 90.963 0.0 0.0 0.0 34.4420594384119 9.877203139966326 9.877203139966326 44.92660950345218 0 0.4247425010840047 2.0 0.0 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}R{I|L} 6.0591 - 15 + 1 1.384 52791.4 1.0 12596 5032 17628 HBL1_DMSO_200M_050219_2,17630 HBL1_DMSO_200M_050219_2,17630,LLVVGGGK False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17631 93.782 19.0 2565800.0 25 0 381880.0 + 13280 HIPDVITYL 9 72 535.7982331066675 1069.5819132801348 2 535.7976562380791 MULTI CID FTMS 0 0 0 17628 2052200.0 0.8889918917718866 -4 0.4433135986328125 3 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 30.22481116460888 0.1466181017706357 4 [VP]D{I|L}H{I|L}TY{I|L} 9 4 + 32.49 0.0 0.0 3.0376 3.0376 77.227 0.0 0.0 0.0 2.632192780232792 16.91630954681238 2.632192780232792 12.73001272063738 0 0.6677353201839438 0.0 0.5 0.0 [VP]D{I|L}H{I|L}TY{I|L};[EP]VVH{I|L}TY{I|L};[H{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[H{I|L}]Y{I|L};[VP]D{I|L}T[H{I|L}]Y{I|L};[VP]{[TV]|[{I|L}S]}E[H{I|L}]Y{I|L};[EP]VVT[H{I|L}]Y{I|L} 3.0376;1.8474;1.6448;1.3799;0.30656;0.18974 -;-;-;-;-;- 118 1 1.384 44968.7 1.0 12597 5032 17628 HBL1_DMSO_200M_050219_2,17631 HBL1_DMSO_200M_050219_2,17631,HIPDVITYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17632 93.783 38.0 1101500.0 25 0 100890.0 + 9655 FLPDPSALQNL 11 75 607.8244566049905 1213.6343602767809 2 607.8245117068291 MULTI CID FTMS 0 0 0 17628 1326177.125 1.0 0 0.0 4 Unmodified _FLPDPSALQNL_ ENSG00000158019|ENST00000379624|BABAM2;nc|ENSG00000158019|Q9NXR7-1|BABAM2;nc|ENSG00000158019|Q9NXR7-3|BABAM2;nc|ENSG00000158019|Q9NXR7-4|BABAM2 36.506200033944 0.2662161991516171 4 [DP][PS]A{I|L}{M(Oxidation (M))|F}{I|L}QN{I|L} 11 4 [DP][PS]A{I|L}{M(Oxidation (M))|F}{I|L} + + 22.061 16.52 1.9657 1.8177 1.8177 44.466 0.0 0.0 0.0 0.0 4.325491755029098 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.7302046884880937 [DP][PS]A{I|L}{M(Oxidation (M))|F}{I|L}QN{I|L} 1.8177 - 646 + 1 1.384 36984.2 1.0 12598 5032 17628 HBL1_DMSO_200M_050219_2,17632 HBL1_DMSO_200M_050219_2,17632,FLPDPSALQNL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17633 93.785 74.0 791610.0 25 0 191450.0 + 4933 DGLTVHLVI 9 84 483.7847146685895 965.5548764039788 2 483.7849304080009 MULTI CID FTMS 0 0 0 17628 620271.75 0.282053532360728 -2 0.2358627319335937 5 Unmodified _DGLTVHLVI_ ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000175520|ENST00000311659|UBQLN3;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000472638.1_1_1:156020124-156021603:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;nc|ENSG00000160803|Q9NRR5-2|UBQLN4 50.855029805455786 0.0384952370514206 4 [H{I|L}]S{I|L}[DG]{I|L}V{I|L} 9 6 + 44.128 0.0 0.0 4.5703 4.5703 70.882 0.0 0.0 0.0 1.974987195809419 22.70562737420061 1.974987195809419 2.66080906351597 0 0.6435078169319297 0.0 1.1549471895720984 0.0 [H{I|L}]S{I|L}[DG]{I|L}V{I|L};[DG]{I|L}TVH{I|L}V{I|L};[H{I|L}]S{I|L}V{[DA]|[EG]}V{I|L};[H{I|L}]VT[DG]{I|L}V{I|L};[HV]T{I|L}[DG]{I|L}V{I|L};[H{I|L}]VTV{[DA]|[EG]}V{I|L};[HV]T{I|L}V{[DA]|[EG]}V{I|L};[HV]{I|L}T[DG]{I|L}V{I|L};[H{I|L}]VVT{[DA]|[EG]}V{I|L};[HV]{I|L}TV{[DA]|[EG]}V{I|L} 4.5703;4.2947;4.1304;3.9421;3.8464;3.5022;3.4065;3.2182;3.0081;2.7783 -;+;-;-;-;-;-;-;-;- + 368 1 1.384 54517.6 1.0 12599 5032 17628 HBL1_DMSO_200M_050219_2,17633 HBL1_DMSO_200M_050219_2,17633,DGLTVHLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17634 93.787 88.0 464230.0 25 0 77471.0 + 9657 FLPMRWIRRKL 11 71 505.9748055598699 1514.9025872798095 3 505.9748718142509 MULTI CID FTMS 0 0 0 17628 593594.0 1.0 0 0.0 6 Unmodified _FLPMRWIRRKL_ REV__ENST00000577847.1_1_17:18087769-18087952:-|nuORF 0.0948413911109767 0.8747004676205551 4 YV 2 -1 16.198 0.0 0.0 1.0692 0.0 0.0 1234.7595951917222 0.0 1234.7595951917222 0.0 2.6173854735253794 0.0 0.0 0 0.0 0.0 0.0 0.0 YV 1.0692 - 77 + 1 1.384 44739.8 1.0 12600 5032 17628 HBL1_DMSO_200M_050219_2,17634 HBL1_DMSO_200M_050219_2,17634,FLPMRWIRRKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17635 93.79 185.0 823950.0 25 0 90061.0 + 34118 SLLQTLYKV 9 154 532.8209500097414 1063.6273470862827 2 532.8210937380791 MULTI CID FTMS 0 0 0 17628 483155.5625 0.7886518242872461 -1 0.1530914306640625 7 Unmodified _SLLQTLYKV_ ENSG00000100401|ENST00000356244|RANGAP1 96.11092074494114 0.0124975504059861 4 {[TV]|[{I|L}S]}{I|L}QT{I|L}YKV 9 0 + 90.553 0.0 0.0 8.5136 8.5136 89.847 0.0 0.0 0.0 27.147642715192497 6.842467475153114 6.842467475153114 6.842467475153114 0 1.0189301784845295 2.0 0.9802046884880936 0.9749073637206092 + + {[TV]|[{I|L}S]}{I|L}QT{I|L}YKV;{[TV]|[{I|L}S]}{I|L}QT{I|L}YVK;{[TV]|[{I|L}S]}{I|L}[AG]T{I|L}YKV;{[TV]|[{I|L}S]}{I|L}[AG]T{I|L}YVK;{[TV]|[{I|L}S]}{I|L}[WR]YKV;{[TV]|[{I|L}S]}VAAT{I|L}YKV;{[TV]|[{I|L}S]}{I|L}[WR]YVK;{[TV]|[{I|L}S]}VAAT{I|L}YVK;{[TV]|[{I|L}S]}[WR]{I|L}YKV;{[TV]|[{I|L}S]}K[DV]{I|L}YKV 8.5136;7.8702;7.6478;7.0045;6.0691;5.7356;5.4258;5.0923;4.8165;4.7523 +;-;-;-;-;-;-;-;-;- + 3367 + 1 1.384 122077.9 1.0 12601 5032 17628 HBL1_DMSO_200M_050219_2,17635 HBL1_DMSO_200M_050219_2,17635,SLLQTLYKV True True SLLQTLYKV 93.790107 532.821093738079 5055011.0 17628.0 ENSG00000100401|ENST00000356244|RANGAP1 6.368492126464844 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17636 93.793 160.0 503170.0 25 0 45161.0 + -1 VLRMALMVPL 10 88 579.8418157046 1157.669078476 2 579.3380615115166 MULTI CID FTMS 0 0 0 17628 433033.21875 0.9065847706227308 2 -0.2642059326171875 8 Oxidation (M) _VLRM(Oxidation (M))ALMVPL_ REV__ENSG00000181408|ENST00000313135|UTS2R 10.073929032068715 0.6785112666868882 4 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VV{I|L}P{M(Oxidation (M))|F}[{I|L}P] 10 -1 + 49.155 0.0 0.0 4.2461 4.2461 70.485 0.0 0.0 0.0 8.464467979859336 7.269987279362624 7.269987279362624 3.0102999566398125 0 0.0 2.0 0.0 0.25 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VV{I|L}P{M(Oxidation (M))|F}[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VV{I|L}{M(Oxidation (M))|F}P[{I|L}P];[{I|L}V][R{M(Oxidation (M))|F}]G{I|L}P{M(Oxidation (M))|F}[{I|L}P];[{I|L}V][R{M(Oxidation (M))|F}]{I|L}GP{M(Oxidation (M))|F}[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VV{M(Oxidation (M))|F}{I|L}P[{I|L}P];[{I|L}V][R{M(Oxidation (M))|F}]{I|L}G{M(Oxidation (M))|F}P[{I|L}P];[{I|L}V][R{M(Oxidation (M))|F}]G{I|L}{M(Oxidation (M))|F}P[{I|L}P];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}PG{I|L}{I|L}E[RV];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}P{I|L}G{I|L}E[RV];[{I|L}V]{I|L}EMG{I|L}E[RV] 4.2461;3.986;3.5149;3.5149;3.466;3.2549;3.2549;3.0584;3.0584;2.9216 -;-;-;-;-;-;-;-;-;- 522 1 1.384 67438.5 1.0 12602 5032 17628 HBL1_DMSO_200M_050219_2,17636 HBL1_DMSO_200M_050219_2,17636,VLRMALMVPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17637 93.797 216.0 530640.0 25 0 134600.0 + 33551 SILQSLVPA 9 108 464.27923834065695 926.543923748114 2 464.2791015505791 MULTI CID FTMS 0 0 0 17628 377646.0 0.195713852330352 -2 0.2358627319335937 9 Unmodified _SILQSLVPA_ ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 39.957323273325 0.0756908302845263 4 {[TV]|[{I|L}S]}Q{I|L}S 5 5 35.01 0.0 0.0 3.7786 0.0 0.0 0.0 395.2287741721952 395.2287741721952 11.193051333440938 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.2614393726401687 0.0 {[TV]|[{I|L}S]}Q{I|L}S 3.7786 - 491 1 1.384 88678.2 1.0 12603 5032 17628 HBL1_DMSO_200M_050219_2,17637 HBL1_DMSO_200M_050219_2,17637,SILQSLVPA True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17638 93.801 215.0 799250.0 25 0 94911.0 + 3945 DALLIIPKV 9 127 491.3210162095372 980.6274794858743 2 491.3204833865166 MULTI CID FTMS 0 0 0 17628 352148.40625 0.1849214218245286 -2 0.2358627319335937 10 Unmodified _DALLIIPKV_ ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000492618.5_1_7:56127237-56129562:+|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A 56.17704186161178 0.0281986971544335 4 {[DA]|[EG]}{I|L}{I|L}{I|L}{I|L}PKV 9 0 + 71.378 0.0 0.0 7.2788 7.2788 88.924 0.0 0.0 0.0 48.56074093262476 8.136412797233035 8.136412797233035 9.017420496968867 0 1.6549471895720984 1.6989700043360187 0.0 0.4559771852360796 + + {[DA]|[EG]}{I|L}{I|L}{I|L}{I|L}PKV;{[DA]|[EG]}{I|L}{I|L}{I|L}{I|L}V[KP];{[DA]|[EG]}{I|L}{I|L}{I|L}{I|L}KPV;{[DA]|[EG]}{I|L}{I|L}{I|L}[KP]V{I|L};{[DA]|[EG]}{I|L}{I|L}{I|L}[KP]{I|L}V 7.2788;6.3592;6.356;5.729;4.9608 +;-;-;-;- + 848 + 1 1.384 132180.4 1.0 12604 5032 17628 HBL1_DMSO_200M_050219_2,17638 HBL1_DMSO_200M_050219_2,17638,DALLIIPKV True True DALLIIPKV 93.801417 491.320483386517 19749778.0 17628.0 nc|ENSG00000132141|Q92526-3|CCT6B;;ENSG00000146731|ENST00000275603|CCT6A;;ENSG00000132141|ENST00000314144|CCT6B;;CCT6A|p.N454K|1|0.24|ENSG00000146731|chr7:56061761-56061761|C/G|missense_variant;;ENST00000492618.5_1_7:56127237-56129562:+|nuORF;;nc|ENSG00000132141|Q92526-2|CCT6B;;nc|ENSG00000146731|P40227-2|CCT6A 4.371121565500896 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17639 93.805 171.0 448840.0 25 0 54587.0 + 4136 DAPFVINAI 9 104 480.26321744143775 958.5118819496756 2 480.2635375857353 MULTI CID FTMS 0 0 0 17628 353805.9375 1.0 0 0.0 11 Unmodified _DAPFVINAI_ ENSG00000205084|ENST00000258173|TMEM231;ENST00000564318.1_1_16:75573894-75575375:-|nuORF;nc|ENSG00000205084|Q9H6L2-2|TMEM231;nc|ENSG00000205084|Q9H6L2-3|TMEM231 42.09456458481378 0.0639583784996157 4 {[DA]|[EG]}P{M(Oxidation (M))|F}V 5 4 37.841 0.0 0.0 3.9479 0.0 0.0 0.0 426.233047227484 426.233047227484 -2.3415325528390127 0.0 -2.3415325528390127 0.0 0 0.4247425010840047 1.6989700043360187 0.7931576817365437 0.0 + {[DA]|[EG]}P{M(Oxidation (M))|F}V 3.9479 + + 429 1 1.384 65331.0 1.0 12605 5032 17628 HBL1_DMSO_200M_050219_2,17639 HBL1_DMSO_200M_050219_2,17639,DAPFVINAI True True DAPFVINAI 93.804742 480.263537585735 3420194.0 17628.0 ENSG00000205084|ENST00000258173|TMEM231;;nc|ENSG00000205084|Q9H6L2-3|TMEM231;;nc|ENSG00000205084|Q9H6L2-2|TMEM231;;ENST00000564318.1_1_16:75573894-75575375:-|nuORF 0.3547414143880208 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17640 93.809 241.0 312850.0 25 0 34296.0 15773 ISDVVNYFLSV 11 88 628.3321161089559 1254.6496792847115 2 628.3319579958916 MULTI CID FTMS 0 0 0 17628 318471.84375 0.1126781837076823 4 -0.4584426879882812 12 Unmodified _ISDVVNYFLSV_ ENST00000368468.3_1_6:119499937-119500069:-|nuORF 30.7034409873982 0.3712764582118616 4 [VS]{I|L}[YN]DV{M(Oxidation (M))|F}{I|L}[VS] 11 5 + 41.47 0.0 0.0 3.3053 3.3053 71.74 0.0 0.0 0.0 0.0166728945909611 15.607898329531372 0.0166728945909611 6.020599913279618 0 1.0 1.5228787452803376 0.0 0.0 [VS]{I|L}[YN]DV{M(Oxidation (M))|F}{I|L}[VS];{[TV]|[{I|L}S]}V[YN]DV{M(Oxidation (M))|F}{I|L}[VS];{NN|[MP]|[D{I|L}]|[EV]}V[YN]SV{M(Oxidation (M))|F}{I|L}[VS];{NN|[MP]|[D{I|L}]|[EV]}VQ[TA]Y{M(Oxidation (M))|F}{I|L}[VS];[VS]{I|L}[YN]DV{I|L}{M(Oxidation (M))|F}[VS];{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{M(Oxidation (M))|F}VSKQQCV;[{I|L}V]S[YN]DV{M(Oxidation (M))|F}{I|L}[VS];[{I|L}V]D[YN]SV{M(Oxidation (M))|F}{I|L}[VS];[{I|L}V]DQ[TA]Y{M(Oxidation (M))|F}{I|L}[VS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[C(Carbamidomethyl (C))R]DV{M(Oxidation (M))|F}{I|L}[VS] 3.3053;2.8255;2.7347;2.6568;2.5265;2.4228;2.4175;2.2771;2.1993;2.0473 -;-;-;-;-;-;-;-;-;- 399 1 1.384 62986.4 1.0 12606 5032 17628 HBL1_DMSO_200M_050219_2,17640 HBL1_DMSO_200M_050219_2,17640,ISDVVNYFLSV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17641 93.813 178.0 287040.0 25 0 35757.0 + 5657 DPFAFIHKI 9 75 363.2027796300148 1086.5865094902445 3 363.2022582888603 MULTI CID FTMS 0 0 0 17628 288160.625 0.6532797247326064 2 -0.2642059326171875 13 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 13.042465956692816 0.4836390050082244 4 A{M(Oxidation (M))|F}{I|L}HK{I|L} 6 3 29.676 0.0 0.0 2.7311 0.0 0.0 359.14712421406017 0.0 359.14712421406017 0.0 17.457443841136502 0.0 0.0 0 0.2302046884880938 0.0 0.0 0.2302046884880938 + A{M(Oxidation (M))|F}{I|L}HK{I|L} 2.7311 + + 119 + 1 1.384 48173.3 1.0 12607 5032 17628 HBL1_DMSO_200M_050219_2,17641 HBL1_DMSO_200M_050219_2,17641,DPFAFIHKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17642 93.818 286.0 284060.0 25 0 26726.0 + 2364 AQLQDFDWQV 10 109 625.295971946608 1248.577390960016 2 625.2960082888603 MULTI CID FTMS 0 0 0 17628 251799.4375 0.7317626532122397 -1 0.1530914306640625 14 Unmodified _AQLQDFDWQV_ ENSG00000169019|ENST00000381571|COMMD8 96.11092074494114 0.0088956849251946 4 [AG]A{I|L}QD{M(Oxidation (M))|F}D 8 5 64.985 0.0 0.0 5.2048 0.0 0.0 0.0 428.1918498614846 428.1918498614846 41.43623537062852 0.0 0.0 0.0 0 0.2396518287104437 1.6989700043360187 0.6694451763165201 1.3556270500406935 [AG]A{I|L}QD{M(Oxidation (M))|F}D 5.2048 - 2501 1 1.384 66568.6 1.0 12608 5032 17628 HBL1_DMSO_200M_050219_2,17642 HBL1_DMSO_200M_050219_2,17642,AQLQDFDWQV True True AQLQDFDWQV 93.817967 625.29600828886 3678730.25 17628.0 ENSG00000169019|ENST00000381571|COMMD8 5.9943868319193525 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17643 93.832 800.0 204870.0 25 0 23682.0 + 874 AEVDVNQKLLL 11 156 621.3575757175456 1240.7005985018911 2 621.3589355349541 MULTI CID FTMS 0 0 0 17628 172775.8125 0.0028900573412112 18 -1.675872802734375 15 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 57.72198328787511 0.0783903820882629 4 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}{I|L} 12 -1 + 97.332 0.0 0.0 7.8449 7.8449 85.006 0.0 0.0 0.0 7.686894864666826 0.8715017571890087 0.8715017571890087 3.807196863200844 0 2.7302046884880937 1.6989700043360187 0.9604093769761876 0.9436726795685342 {[DA]|[EG]}{I|L}DVANK{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVANKG{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVANK{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}E{I|L}G{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVANKG{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}EDVANK{I|L}G{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}E{I|L}G{I|L}{I|L};{[DA]|[EG]}VEVANK{I|L}G{I|L}{I|L} 7.8449;7.5381;7.2254;7.1266;7.0704;6.9846;6.9185;6.897;6.8795;6.8786 -;-;-;-;-;-;-;-;-;- 42346 1 1.384 121398.7 0.9100000262260436 12609 5032 17628 HBL1_DMSO_200M_050219_2,17643 HBL1_DMSO_200M_050219_2,17643,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17644 93.846 800.0 289440.0 25 0 25930.0 + 19538 LFPMPRVIY 9 187 568.321174530099 1134.627796126998 2 568.3199340701103 MULTI CID FTMS 0 0 0 17628 162143.0 0.7875091958204721 4 -0.4584426879882812 16 Unmodified _LFPMPRVIY_ ENSG00000013293|ENST00000231706|SLC7A14 28.486842064014134 0.1687311288560894 4 {I|L}{M(Oxidation (M))|F}PM 4 5 32.423 0.0 0.0 2.8576 0.0 0.0 0.0 643.358620650676 643.358620650676 14.597075905765651 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + {I|L}{M(Oxidation (M))|F}PM 2.8576 + + 2267 + 1 1.384 175912.7 0.8799999952316284 12610 5032 17628 HBL1_DMSO_200M_050219_2,17644 HBL1_DMSO_200M_050219_2,17644,LFPMPRVIY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17645 93.859 800.0 334540.0 25 0 46162.0 -1 ISLDRYCAVM 10 150 593.7827179705298 1185.5508830078595 2 593.7829467654228 MULTI CID FTMS 0 0 0 17628 147638.25 0.4977768000144136 -1 0.1530914306640625 17 Oxidation (M) _ISLDRYCAVM(Oxidation (M))_ ENSG00000113749|ENST00000636584|HRH2;nc|ENSG00000113749|P25021-2|HRH2;nc|ENSG00000113749|P25021|HRH2 26.268140514670165 0.3785003716575977 4 {[TV]|[{I|L}S]}{I|L}D{I|L} 5 -1 57.419 0.0 0.0 4.8432 0.0 0.0 0.0 641.219388922428 641.219388922428 34.71566373331114 0.0 0.0 0.0 0 0.9531198197908842 2.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}{I|L}D{I|L} 4.8432 - 755 + 1 1.384 196121.9 0.8600000143051147 12611 5032 17628 HBL1_DMSO_200M_050219_2,17645 HBL1_DMSO_200M_050219_2,17645,ISLDRYCAVM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17646 93.875 800.0 188090.0 25 0 18142.0 + 29891 QRWLFFFYFRF 11 113 828.9287576933631 1655.842962453526 2 828.9293701052666 MULTI CID FTMS 0 0 0 17628 132877.578125 1.0 0 0.0 18 Unmodified _QRWLFFFYFRF_ REV__LTR2_dup419|chr9:62800851-62801305:+|1.9228373940033752|0.4981646979306208|1.95|48.0|25|1|anti-sense 0.3070304955306653 0.8736993455979228 4 [KP]{I|L}Y{I|L}VWY 8 -1 34.162 0.0 0.0 2.0631 0.0 0.0 0.0 590.2444920459658 590.2444920459658 -1.3844465379994375 0.0 -1.3844465379994375 0.0 0 0.0 0.0 0.0 0.3807196863200844 [KP]{I|L}Y{I|L}VWY 2.0631 - 1083 1 1.384 106273.1 0.800000011920929 12612 5032 17628 HBL1_DMSO_200M_050219_2,17646 HBL1_DMSO_200M_050219_2,17646,QRWLFFFYFRF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17647 93.882 389.0 289710.0 25 0 28695.0 + 19889 LHQSELIHA 9 152 524.2819313361884 1046.5493097391768 2 524.7874633669853 MULTI CID FTMS 0 0 0 17628 100974.3125 0.478822602886544 -3 0.334686279296875 19 Unmodified _LHQSELIHA_ REV__ENSG00000053328|ENST00000338882|METTL24 19.256988751693697 0.3154191944385105 4 [EP]{I|L}{I|L}{[QS]|[NT]}{M(Oxidation (M))|F}T{I|L} 9 -1 + 42.004 0.0 0.0 4.0135 4.0135 65.165 0.0 0.0 0.0 0.6339318005635306 10.339322000954269 0.6339318005635306 0.6339318005635306 0 0.0 0.0 1.0114393726401687 0.3807196863200844 [EP]{I|L}{I|L}{[QS]|[NT]}{M(Oxidation (M))|F}T{I|L};[{I|L}T]{I|L}[HN]E{I|L}[HA];[EP]{I|L}E[HN]VP{I|L};[EP]{I|L}E[KA]{M(Oxidation (M))|F}T{I|L};[EP]{I|L}{[QS]|[NT]}{I|L}{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}H{[QS]|[NT]}{I|L}{I|L}[HA];[EP]{I|L}E[HN]{I|L}PV;{[QN]|[E{I|L}]|[KN]}H[KA]E{I|L}[HA];{[QN]|[E{I|L}]|[KN]}H{I|L}{[QS]|[NT]}{I|L}[HA];[{I|L}T]{I|L}[HN]{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}] 4.0135;3.953;3.9374;3.7259;3.27;3.1687;3.0256;2.8811;2.4252;2.3894 -;-;-;-;-;-;-;-;-;- 813 + 1 1.384 91276.9 1.0 12613 5032 17628 HBL1_DMSO_200M_050219_2,17647 HBL1_DMSO_200M_050219_2,17647,LHQSELIHA False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17648 93.896 800.0 289970.0 25 0 34756.0 + + 19482 MYFIVRSL 8 168 515.2888164174124 1028.5630799016246 2 515.2852050662041 MULTI CID FTMS 0 0 0 17628 93514.078125 0.0560188950693421 -8 0.8904342651367188 20 Unmodified _LFHTQLASI_ ENSG00000174851|ENST00000376901|YIF1A 13.50788311687929 0.4710407108020397 4 Y{M(Oxidation (M))|F}{I|L}VRS{I|L} 7 -1 30.508 0.0 0.0 2.9661 0.0 0.0 132.04984855572462 0.0 132.04984855572462 0.0 4.565629270416025 0.0 0.0 0 0.0 0.0 0.6307196863200843 0.0 Y{M(Oxidation (M))|F}{I|L}VRS{I|L} 2.9661 - 520 + 1 1.384 179263.9 0.7300000190734863 12614 5032 17628 HBL1_DMSO_200M_050219_2,17648 HBL1_DMSO_200M_050219_2,17648,LFHTQLASI False False MYFIVRSL 93.895579 515.285205066204 2001440.625 17628.0 ENSG00000174851|ENST00000376901|YIF1A 5.411370595296224 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17650 93.9 2.6 20049000.0 25 0 3851900.0 + 4672 DAYVLPKLYV 10 62 590.8342673449122 1179.6539817566245 2 590.8353149294853 MULTI CID FTMS 0 0 0 17649 17254678.0 0.4938797270653202 1 -0.1435317993164062 1 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 38.17557092003332 0.1768326257063233 4 {[DA]|[EG]}YV 4 6 37.167 0.0 0.0 3.1507 0.0 0.0 0.0 728.4343543281443 728.4343543281443 0.491727930838266 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YV 3.1507 + + 185 1 1.376 43649.1 1.0 12615 5033 17649 HBL1_DMSO_200M_050219_2,17650 HBL1_DMSO_200M_050219_2,17650,DAYVLPKLYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17651 93.901 4.5 9824000.0 25 0 1209800.0 + 20425 LLIENVASL 9 89 486.29226213170926 970.5699713302186 2 486.2924377322197 MULTI CID FTMS 0 0 0 17649 12896471.0 0.9852752718537702 1 -0.1435317993164062 2 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 46.020951573049366 0.0490941689151868 4 {I|L}{I|L}{I|L}ENVAS{I|L} 9 0 {I|L}{I|L}{I|L}ENV + + 31.462 29.843 4.3796 3.2416 3.2416 46.515 0.0 0.0 0.0 0.0 2.248274036106885 0.0 0.0 0 0.5 0.0 0.75 0.0 + + {I|L}{I|L}{I|L}ENVAS{I|L} 3.2416 + + 228 + 1 1.376 37116.4 1.0 12616 5033 17649 HBL1_DMSO_200M_050219_2,17651 HBL1_DMSO_200M_050219_2,17651,LLIENVASL True True LLIENVASL 93.901079 486.29243773222 237863872.0 17649.0 nc|ENSG00000233276|P07203-2|GPX1;;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;;ENSG00000233276|ENST00000419783|GPX1;;ENST00000388829.3_1_X:13397321-13397372:-|nuORF 3.6492978731791177 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17652 93.902 4.5 11452000.0 25 0 2573300.0 + 13594 HPLVILNI 8 69 459.7921069692591 917.5696610053184 2 459.7923461794853 MULTI CID FTMS 0 0 0 17649 12143855.0 1.0 0 0.0 3 Unmodified _HPLVILNI_ ENSG00000168090|ENST00000303904|COPS6;ENST00000465027.1_1_7:99686595-99687052:+|nuORF;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 38.99230528602208 0.2511498934509823 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L} 8 0 + 54.302 0.0 0.0 5.918 5.918 89.672 0.0 0.0 0.0 23.226825097560425 38.8173657553704 23.226825097560425 27.698405410982616 0 0.7429928190999391 0.0 1.6237125054200234 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L};[{I|L}P]HV{I|L}{I|L}N{I|L};[{I|L}P]VH{I|L}{I|L}N{I|L};[{I|L}P]V{I|L}H{I|L}N{I|L} 5.918;2.8993;2.8993;2.5713 +;-;-;- + 89 1 1.376 48826.0 1.0 12617 5033 17649 HBL1_DMSO_200M_050219_2,17652 HBL1_DMSO_200M_050219_2,17652,HPLVILNI False True HPLVILNI 93.902258 459.792346179485 305831112.0 17649.0 ENSG00000168090|ENST00000303904|COPS6;;ENST00000496358.1_1_7:99686670-99688376:+|nuORF;;ENST00000465027.1_1_7:99686595-99687052:+|nuORF 3.23586505651474 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17653 93.903 13.0 5971200.0 25 0 743080.0 + 43946 YGLPVVVKL 9 80 494.31525568050944 986.6159584278188 2 494.3149597048759 MULTI CID FTMS 0 0 0 17649 3323083.0 0.5608291625905745 -1 0.1206741333007812 4 Unmodified _YGLPVVVKL_ ENSG00000168036|ENST00000349496|CTNNB1 39.957323273325 0.0756908302845263 4 YG{I|L}PVVVK{I|L} 9 0 + 57.276 0.0 0.0 5.8053 5.8053 90.223 0.0 0.0 0.0 17.644775768222445 10.959924024478134 10.959924024478134 57.27638518812143 0 0.718765315847925 1.154901959985743 0.0 0.0 + + YG{I|L}PVVVK{I|L} 5.8053 + + 106 + 1 1.376 66514.6 1.0 12618 5033 17649 HBL1_DMSO_200M_050219_2,17653 HBL1_DMSO_200M_050219_2,17653,YGLPVVVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17654 93.905 29.0 1837700.0 25 0 143410.0 + 44585 YPFINSRIITV 11 59 661.8768817256396 1321.739210518079 2 661.8773071169853 MULTI CID FTMS 0 0 0 17649 1752182.5 0.8584514673300029 1 -0.1435317993164062 5 Unmodified _YPFINSRIITV_ ENSG00000037474|ENST00000264670|NSUN2;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 39.21299971606389 0.2245192836502623 4 YP{M(Oxidation (M))|F}{I|L}N 5 6 65.701 0.0 0.0 4.9708 0.0 0.0 0.0 684.4068697565061 684.4068697565061 37.245462655597095 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + YP{M(Oxidation (M))|F}{I|L}N 4.9708 + + 72 + 1 1.376 45714.1 1.0 12619 5033 17649 HBL1_DMSO_200M_050219_2,17654 HBL1_DMSO_200M_050219_2,17654,YPFINSRIITV False True YPFINSRIITV 93.904614 661.877307116985 124707208.0 17649.0 ENST00000513888.5_1_5:6600041-6604993:-|nuORF;;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;;ENSG00000037474|ENST00000264670|NSUN2;;nc|ENSG00000037474|Q08J23-3|NSUN2;;nc|ENSG00000037474|Q08J23-2|NSUN2 7.460963726043701 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17655 93.906 24.0 2422100.0 25 0 177420.0 + 12099 GQIDLLERL 9 83 528.8060824149661 1055.597611896732 2 529.3077880740166 MULTI CID FTMS 0 0 0 17649 1745726.375 0.7059930756540003 -3 0.356536865234375 6 Unmodified _GQIDLLERL_ ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-2|APC;nc|ENSG00000134982|P25054-3|APC 22.65808497894818 0.2428932432760099 4 {[QG]|[NA]}{I|L}D{I|L}{I|L}E[R{I|L}] 9 0 + 48.121 0.0 0.0 4.5587 4.5587 74.523 0.0 0.0 0.0 7.147642715192504 6.020599913279625 6.020599913279625 4.771212547196626 0 0.9247425010840048 0.0 0.0 0.0 + + {[QG]|[NA]}{I|L}D{I|L}{I|L}E[R{I|L}];{[QG]|[NA]}{I|L}{I|L}D{I|L}E[R{I|L}];{[QG]|[NA]}{I|L}D{I|L}{I|L}[{I|L}V]W;{[QG]|[NA]}{I|L}{I|L}D{I|L}[{I|L}V]W;{[QG]|[NA]}{I|L}D{I|L}{I|L}[W{I|L}]V;{[QG]|[NA]}{I|L}{I|L}D{I|L}[W{I|L}]V;[WC(Carbamidomethyl (C))]P{I|L}[{I|L}V][R{I|L}];{[QG]|[NA]}{I|L}EE[{I|L}V][R{I|L}];{[QG]|[NA]}EE{I|L}[{I|L}V][R{I|L}] 4.5587;4.1067;3.9883;3.5363;3.3695;2.9175;1.1258;1.1244;0.72207 +;-;-;-;-;-;-;-;- + 123 + 1 1.376 49029.9 1.0 12620 5033 17649 HBL1_DMSO_200M_050219_2,17655 HBL1_DMSO_200M_050219_2,17655,GQIDLLERL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17656 93.907 29.0 1558100.0 25 0 171090.0 3088 AVNPIIYSF 9 69 512.2792297186097 1022.5439065040194 2 512.2793456912041 MULTI CID FTMS 0 0 0 17649 1704419.25 0.3220059607459065 5 -0.5553970336914062 7 Unmodified _AVNPIIYSF_ ENSG00000125910|ENST00000246115|S1PR4 28.486842064014134 0.1687311288560894 4 [VP]NA{I|L}Y 6 5 41.981 0.0 0.0 4.1056 0.0 0.0 0.0 362.1704073187256 362.1704073187256 15.739087409443188 0.0 0.0 0.0 0 0.0 1.0 0.0 1.055462187404089 [VP]NA{I|L}Y 4.1056 - 100 1 1.376 43421.2 1.0 12621 5033 17649 HBL1_DMSO_200M_050219_2,17656 HBL1_DMSO_200M_050219_2,17656,AVNPIIYSF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17657 93.909 94.0 591210.0 25 0 65234.0 + 35883 SVLPDSVEIGL 11 92 564.8107477463241 1127.606942559448 2 564.8111450076103 MULTI CID FTMS 0 0 0 17649 612693.75 0.5312365878083991 1 -0.1435317993164062 8 Unmodified _SVLPDSVEIGL_ ENSG00000020129|ENST00000373243|NCDN;nc|ENSG00000020129|Q9UBB6-2|NCDN 21.799462835604743 0.5803446114589816 4 [VS][DP]E{I|L}W 7 5 44.543 0.0 0.0 3.9502 0.0 0.0 0.0 298.1774131007168 298.1774131007168 22.86007564130905 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 1.6861818737241734 0.0 [VS][DP]E{I|L}W 3.9502 - 286 1 1.376 47468.3 1.0 12622 5033 17649 HBL1_DMSO_200M_050219_2,17657 HBL1_DMSO_200M_050219_2,17657,SVLPDSVEIGL False True SVLPDSVEIGL 93.909035 564.81114500761 16468364.0 17649.0 nc|ENSG00000020129|Q9UBB6-2|NCDN;;ENSG00000020129|ENST00000373243|NCDN 2.576839129130045 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17658 93.921 709.0 288930.0 25 0 20303.0 + 41972 VQLPDGGWGL 10 189 521.2710401900581 1040.527527446916 2 521.2717773318291 MULTI CID FTMS 0 0 0 17649 289981.9375 0.3430317556290655 2 -0.2576217651367187 9 Unmodified _VQLPDGGWGL_ ENSG00000160285|ENST00000397728|LSS;nc|ENSG00000160285|P48449-2|LSS 43.77239144664712 0.1177314611616471 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}YYWG{I|L} 8 4 + 46.767 0.0 0.0 4.4945 4.4945 68.237 0.0 0.0 0.0 1.2763625255165325 16.409780573583316 1.2763625255165325 1.2763625255165325 0 1.774227503252014 0.5686362358410126 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}YYWG{I|L};{[VA]|[{I|L}G]}G{I|L}YYWG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}YYNE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YY{I|L}WG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}YY{[DA]|[EG]}G{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GDPVAG{I|L}G{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GDPVQ{I|L}G{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GDP{I|L}GG{I|L}G{I|L};{[VA]|[{I|L}G]}GYY{I|L}WG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YYEG{I|L}G{I|L} 4.4945;4.3718;3.9171;3.6046;3.6044;3.6033;3.55;3.509;3.4819;3.4793 -;-;-;-;-;-;-;-;-;- 1877 1 1.376 160049.3 1.0 12623 5033 17649 HBL1_DMSO_200M_050219_2,17658 HBL1_DMSO_200M_050219_2,17658,VQLPDGGWGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17659 93.927 294.0 395040.0 25 0 37441.0 + 45541 YVAELIQQL 9 135 538.8030244646636 1075.5914959961272 2 538.8032104372978 MULTI CID FTMS 0 0 0 17649 257948.109375 1.0 0 0.0 10 Unmodified _YVAELIQQL_ ENSG00000086504|ENST00000199706|MRPL28 38.17557092003332 0.0854718145212029 4 [YV]AE{I|L}{I|L} 6 3 33.434 0.0 0.0 3.1085 0.0 0.0 0.0 384.1875402678647 384.1875402678647 7.927761736534666 0.0 0.0 0.0 0 0.25 2.0 0.0 0.0 + [YV]AE{I|L}{I|L} 3.1085 + + 562 1 1.376 90653.7 1.0 12624 5033 17649 HBL1_DMSO_200M_050219_2,17659 HBL1_DMSO_200M_050219_2,17659,YVAELIQQL True True YVAELIQQL 93.92675 538.803210437298 3226668.25 17649.0 ENSG00000086504|ENST00000199706|MRPL28 3.953277190526327 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17660 93.94 752.0 301070.0 25 0 21907.0 + 16893 KIGPITPLEF 10 186 557.829089544382 1113.643626155564 2 557.8289062380791 MULTI CID FTMS 0 0 0 17649 253513.5625 1.0 0 0.0 11 Unmodified _KIGPITPLEF_ ENSG00000108578|ENST00000261714|BLMH;ENST00000579325.1_1_17:28601041-28612498:-|nuORF;ENST00000582669.1_1_17:28600488-28612498:-|nuORF 53.40400417844725 0.0601721406801337 4 [{I|L}P]TG[K{I|L}]P{I|L}E{M(Oxidation (M))|F} 10 4 + 72.232 0.0 0.0 6.4861 6.4861 83.498 0.0 0.0 0.0 11.450951462811062 38.958377525250825 11.450951462811062 5.853232939203096 0 1.325257498915995 1.3010299956639813 1.8556270500406933 0.0 [{I|L}P]TG[K{I|L}]P{I|L}E{M(Oxidation (M))|F};[{I|L}P]G[K{I|L}]TP{I|L}E{M(Oxidation (M))|F};[{I|L}P]GT[K{I|L}]P{I|L}E{M(Oxidation (M))|F};[{I|L}P]T{I|L}KGP{I|L}E{M(Oxidation (M))|F};[{I|L}P]TG[{I|L}P]K{I|L}E{M(Oxidation (M))|F};[TP]{I|L}G[K{I|L}]P{I|L}E{M(Oxidation (M))|F};[{I|L}P]TG[K{I|L}]PE{I|L}{M(Oxidation (M))|F};[{I|L}P]TG[K{I|L}]EP{I|L}{M(Oxidation (M))|F};[{I|L}P]ETP{I|L}GK{I|L}{M(Oxidation (M))|F};[{I|L}T]PG[K{I|L}]P{I|L}E{M(Oxidation (M))|F} 6.4861;5.9605;5.9455;5.8889;5.2348;5.1537;5.1534;5.142;4.9674;4.9633 -;-;-;-;-;-;-;-;-;- 2210 1 1.376 172888.6 1.0 12625 5033 17649 HBL1_DMSO_200M_050219_2,17660 HBL1_DMSO_200M_050219_2,17660,KIGPITPLEF True True KIGPITPLEF 93.939775 557.828906238079 2468577.5 17649.0 ENST00000579325.1_1_17:28601041-28612498:-|nuORF;;ENSG00000108578|ENST00000261714|BLMH;;ENST00000582669.1_1_17:28600488-28612498:-|nuORF 6.518839041392009 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17661 93.954 800.0 66445.0 25 0 2983.5 -1 0 80 1158.2024874846152 3471.585633054045 3 1159.199267566204 MULTI CID FTMS 0 0 0 17649 90654.578125 1.0 0 0.0 12 4 G 1 -1 6.9897 0.0 0.0 0.20134 0.0 0.0 2616.476515477677 795.0502413385374 3411.5267568162144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20134 - 6 + 1 1.376 39862.6 0.8299999833106995 12626 5033 17649 HBL1_DMSO_200M_050219_2,17661 HBL1_DMSO_200M_050219_2,17661, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17662 93.967 800.0 194850.0 25 0 15462.0 + 4529 DAYLVHLI 8 160 472.2661549896553 942.5177570461108 2 472.2669860720634 MULTI CID FTMS 0 0 0 17649 150485.53125 0.0549108698125106 3 -0.3377685546875 13 Unmodified _DAYLVHLI_ ENSG00000105671|ENST00000247003|DDX49;ENST00000595858.5_1_19:19032475-19037138:+|nuORF;ENST00000601803.5_1_19:19032987-19035509:+|nuORF;nc|ENSG00000105671|Q9Y6V7-2|DDX49 45.7499826716795 0.1592378023510922 4 {[DA]|[EG]}Y{I|L}VH{I|L}{I|L} 8 0 + 52.868 0.0 0.0 5.6092 5.6092 89.303 0.0 0.0 0.0 26.2126004304347 10.43305028184122 10.43305028184122 52.86806291892539 0 0.7742275032520141 1.6989700043360187 0.0 0.0 + + {[DA]|[EG]}Y{I|L}VH{I|L}{I|L} 5.6092 + + 297 + 1 1.376 119822.7 0.7599999904632568 12627 5033 17649 HBL1_DMSO_200M_050219_2,17662 HBL1_DMSO_200M_050219_2,17662,DAYLVHLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17663 93.973 316.0 428560.0 25 0 36677.0 + 4551 DAYQVILDGV 10 153 546.7824690904818 0 546.7828857302666 PEAK CID FTMS 0 0 0 17649 148660.59375 0.7737371330518175 -1 0.1206741333007812 14 Unmodified _DAYQVILDGV_ ENSG00000166181|ENST00000531273|API5;ENST00000530300.1_1_11:43333659-43340360:+|nuORF;nc|ENSG00000166181|Q9BZZ5-1|API5;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-6|API5 49.55428908609986 0.051331770361836 4 {I|L}VDAC(Carbamidomethyl (C)) 5 8 25.578 0.0 0.0 2.3433 0.0 0.0 402.2123248003009 128.07215295963127 530.2844777599322 0.0 0.0 0.0 0.0 0 0.6109243748081782 0.0 0.3807196863200844 0.0 {I|L}VDAC(Carbamidomethyl (C)) 2.3433 - 529 + 1 1.376 108145.1 1.0 12628 5033 17649 HBL1_DMSO_200M_050219_2,17663 HBL1_DMSO_200M_050219_2,17663,DAYQVILDGV True True DAYQVILDGV 93.973227 546.782885730267 2258590.25 17649.0 nc|ENSG00000166181|Q9BZZ5-3|API5;;nc|ENSG00000166181|Q9BZZ5-6|API5;;nc|ENSG00000166181|Q9BZZ5-2|API5;;nc|ENSG00000166181|Q9BZZ5-1|API5;;ENST00000530300.1_1_11:43333659-43340360:+|nuORF;;ENSG00000166181|ENST00000531273|API5 4.231510082880656 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17664 93.989 800.0 58884.0 25 0 13009.0 -1 GFKVHLCCSIH 11 81 679.3303244934764 1356.646096053753 2 679.3314086794853 MULTI CID FTMS 0 0 0 17649 153874.296875 1.0 0 0.0 15 2 Carbamidomethyl (C) _GFKVHLC(Carbamidomethyl (C))C(Carbamidomethyl (C))SIH_ L1MB5_dup414|chr1:156191205-156192060:-|1.6995444750627933|0.2947540995242821|2.53|48.0|53|3|anti-sense 5.731851221503515 0.8481046878870278 4 {I|L} 1 -1 11.594 0.0 0.0 0.85459 0.0 0.0 1225.5509860457432 0.0 1225.5509860457432 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.85459 + + 42 + 1 1.376 40296.4 0.8100000023841858 12629 5033 17649 HBL1_DMSO_200M_050219_2,17664 HBL1_DMSO_200M_050219_2,17664,GFKVHLCCSIH False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 17665 93.997 482.0 265940.0 25 0 47174.0 + 14060 IALPSLRI 8 95 441.7919264529168 881.5692999726336 2 441.7919189333916 MULTI CID FTMS 0 0 0 17649 141123.96875 0.515191765450504 -3 0.356536865234375 16 Unmodified _IALPSLRI_ ENSG00000198712|ENST00000361739|MT-CO2 46.020951573049366 0.1579632664462935 4 {I|L}A{I|L}{I|L}{[SA]|[TG]}{I|L}D 8 4 64.774 0.0 0.0 7.3476 0.0 0.0 0.0 82.06701837711171 82.06701837711171 42.391915987517095 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.6861818737241735 0.0 {I|L}A{I|L}{I|L}{[SA]|[TG]}{I|L}D 7.3476 - 273 + 1 1.376 106458.6 1.0 12630 5033 17649 HBL1_DMSO_200M_050219_2,17665 HBL1_DMSO_200M_050219_2,17665,IALPSLRI False True IALPSLRI 93.997029 441.791918933392 6236141.5 17649.0 ENSG00000198712|ENST00000361739|MT-CO2 -0.1421887675921122 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17666 94.003 325.0 339890.0 25 0 32844.0 + + 19566 IFSIREVSF 9 122 548.7657007656094 1095.516848598019 2 549.2660400271416 MULTI CID FTMS 0 0 0 17649 126743.375 1.0 0 0.0 17 Unmodified _LFSACPVRTC_ ENSG00000108561|ENST00000225698|C1QBP 13.042465956692816 0.6287021003332052 4 {[TV]|[{I|L}S]}H{I|L}W{I|L}S{M(Oxidation (M))|F} 8 -1 34.559 0.0 0.0 3.1546 0.0 0.0 0.0 108.98599149976158 108.98599149976158 3.451945638947187 0.0 0.0 0.0 0 0.0 0.585026652029182 0.6549471895720984 0.0 {[TV]|[{I|L}S]}H{I|L}W{I|L}S{M(Oxidation (M))|F} 3.1546 - 767 1 1.376 88786.7 1.0 12631 5033 17649 HBL1_DMSO_200M_050219_2,17666 HBL1_DMSO_200M_050219_2,17666,LFSACPVRTC False False IFSIREVSF 94.002949 549.266040027142 2752583.0 17649.0 ENSG00000108561|ENST00000225698|C1QBP 4.548441171646118 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17667 94.01 399.0 159370.0 25 0 20276.0 + 7620 KAIEDFELAL 10 95 574.8135498821027 0 574.8135864138603 PEAK CID FTMS 0 0 0 17649 127186.46875 1.0 0 0.0 18 Unmodified _EISQVFEIAL_ nc|ENSG00000163728|Q96N46-2|TTC14;nc|ENSG00000163728|Q96N46-3|TTC14;ENSG00000163728|ENST00000296015|TTC14 19.361941925380144 0.3034098862319568 4 {I|L}E{M(Oxidation (M))|F}DE 5 8 19.922 0.0 0.0 1.7359 0.0 0.0 202.12886007407843 309.19330774478755 511.322167818866 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}E{M(Oxidation (M))|F}DE 1.7359 - 131 + 1 1.376 51635.2 1.0 12632 5033 17649 HBL1_DMSO_200M_050219_2,17667 HBL1_DMSO_200M_050219_2,17667,EISQVFEIAL False True KAIEDFELAL 94.010093 574.81358641386 1524013.875 17649.0 nc|ENSG00000163728|Q96N46-2|TTC14;;nc|ENSG00000163728|Q96N46-3|TTC14;;ENSG00000163728|ENST00000296015|TTC14 5.2501475016276045 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17668 94.025 800.0 92411.0 25 0 6768.4 37686 TLNELEVELL 10 124 586.8258606223318 0 586.3631469607353 PEAK CID FTMS 0 0 0 -1 0 19 Unmodified _TLNELEVELL_ ENSG00000213714|ENST00000371325|FAM209B 15.847184025352805 0.3304572136216667 4 {I|L}T{I|L}K 4 8 25.79 0.0 0.0 2.2012 0.0 0.0 132.02067083258072 581.2858980768186 713.3065689093994 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 {I|L}T{I|L}K 2.2012 - 54 + 1 1.376 58204.6 0.7599999904632568 12633 5033 17649 HBL1_DMSO_200M_050219_2,17668 HBL1_DMSO_200M_050219_2,17668,TLNELEVELL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17669 94.039 800.0 67260.0 25 0 14756.0 -1 EKEMWHRMFAP 11 78 739.3383104894963 1476.6620680457925 2 739.3379394412041 MULTI CID FTMS 0 0 0 17649 81780.171875 0.6485818899645376 9 -0.9117279052734376 20 Oxidation (M) _EKEM(Oxidation (M))WHRMFAP_ ENSG00000077800|ENST00000252037|FKBP6;nc|ENSG00000077800|O75344-2|FKBP6;nc|ENSG00000077800|O75344-3|FKBP6 4.897010918128616 0.8520435188433833 4 [DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]W{M(Oxidation (M))|F}{I|L}{I|L}SA 10 -1 45.227 0.0 0.0 3.0628 0.0 0.0 0.0 235.07648645572505 235.07648645572505 9.028806450206233 0.0 0.0 0.0 0 0.0 2.0 0.2742275032520141 0.0 [DV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]W{M(Oxidation (M))|F}{I|L}{I|L}SA 3.0628 - 288 + 1 1.376 49251.0 0.6100000143051147 12634 5033 17649 HBL1_DMSO_200M_050219_2,17669 HBL1_DMSO_200M_050219_2,17669,EKEMWHRMFAP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17671 94.047 230.0 305220.0 25 0 28308.0 + 37474 TLFEDSFQQI 10 99 614.2986811525255 1226.582809371851 2 614.2986328005791 MULTI CID FTMS 0 0 0 17670 319961.90625 0.5073415714140035 1 -0.1140899658203125 1 Unmodified _TLFEDSFQQI_ ENSG00000078747|ENST00000374864|ITCH;ENSG00000123124|ENST00000517970|WWP1;ENSG00000198373|ENST00000359154|WWP2;ENST00000466609.1_1_3:98377983-98378526:+|nuORF;ENST00000483727.5_1_20:33033173-33065666:+|nuORF;ENST00000518683.5_1_8:87410815-87460532:+|nuORF;nc|ENSG00000123124|Q9H0M0-3|WWP1;nc|ENSG00000123124|Q9H0M0-6|WWP1;nc|ENSG00000198373|O00308-2|WWP2;nc|ENSG00000198373|O00308-3|WWP2;nc|ENSG00000289720|Q96J02-3|ITCH;nc|ENSG00000289720|Q96J02|ITCH 37.97399986684836 0.1789611706409123 4 [{I|L}T]CD{M(Oxidation (M))|F}{I|L}E 7 6 30.738 0.0 0.0 2.506 0.0 0.0 0.0 402.1998497373385 402.1998497373385 10.727656413737025 0.0 0.0 0.0 0 0.0 2.0 1.064909327626439 0.0 [{I|L}T]CD{M(Oxidation (M))|F}{I|L}E 2.506 - 809 1 1.372 57922.8 1.0 12635 5034 17670 HBL1_DMSO_200M_050219_2,17671 HBL1_DMSO_200M_050219_2,17671,TLFEDSFQQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17672 94.053 351.0 268220.0 25 0 56653.0 -1 MNQESTTIK 9 107 555.261248922605 1108.50794491201 2 555.2616454958916 MULTI CID FTMS 0 0 0 17670 171066.6875 0.2723782838717292 2 -0.1942367553710937 2 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))NQESTTIK_ ENSG00000146376|ENST00000368149|ARHGAP18;nc|ENSG00000146376|Q8N392-2|ARHGAP18 8.155526934196011 0.6299788542272896 4 YMATT{I|L}K 7 -1 54.47 0.0 0.0 4.9138 0.0 0.0 282.0817824498 0.0 282.0817824498 0.0 41.4163728604717 0.0 0.0 0 1.305462187404089 0.0 0.3494850021680094 0.2215141619232908 YMATT{I|L}K 4.9138 - 178 + 1 1.372 75693.0 1.0 12636 5034 17670 HBL1_DMSO_200M_050219_2,17672 HBL1_DMSO_200M_050219_2,17672,MNQESTTIK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17673 94.058 248.0 592780.0 25 0 47056.0 + 30011 QTIWDLYGKL 10 134 618.8336158286929 1235.6526787241858 2 618.8343994021416 MULTI CID FTMS 0 0 0 17670 461136.59375 0.2525476446639236 -2 0.2642059326171875 3 Unmodified _QTIWDLYGKL_ REV__ENSG00000151067|ENST00000399655|CACNA1C;REV__ENSG00000157388|ENST00000350061|CACNA1D;REV__nc|ENSG00000151067|Q13936-10|CACNA1C;REV__nc|ENSG00000151067|Q13936-11|CACNA1C;REV__nc|ENSG00000151067|Q13936-13|CACNA1C;REV__nc|ENSG00000151067|Q13936-14|CACNA1C;REV__nc|ENSG00000151067|Q13936-15|CACNA1C;REV__nc|ENSG00000151067|Q13936-16|CACNA1C;REV__nc|ENSG00000151067|Q13936-17|CACNA1C;REV__nc|ENSG00000151067|Q13936-18|CACNA1C;REV__nc|ENSG00000151067|Q13936-19|CACNA1C;REV__nc|ENSG00000151067|Q13936-2|CACNA1C;REV__nc|ENSG00000151067|Q13936-20|CACNA1C;REV__nc|ENSG00000151067|Q13936-21|CACNA1C;REV__nc|ENSG00000151067|Q13936-22|CACNA1C;REV__nc|ENSG00000151067|Q13936-23|CACNA1C;REV__nc|ENSG00000151067|Q13936-24|CACNA1C;REV__nc|ENSG00000151067|Q13936-25|CACNA1C;REV__nc|ENSG00000151067|Q13936-26|CACNA1C;REV__nc|ENSG00000151067|Q13936-27|CACNA1C;REV__nc|ENSG00000151067|Q13936-28|CACNA1C;REV__nc|ENSG00000151067|Q13936-29|CACNA1C;REV__nc|ENSG00000151067|Q13936-3|CACNA1C;REV__nc|ENSG00000151067|Q13936-30|CACNA1C;REV__nc|ENSG00000151067|Q13936-31|CACNA1C;REV__nc|ENSG00000151067|Q13936-32|CACNA1C;REV__nc|ENSG00000151067|Q13936-33|CACNA1C;REV__nc|ENSG00000151067|Q13936-34|CACNA1C;REV__nc|ENSG00000151067|Q13936-35|CACNA1C;REV__nc|ENSG00000151067|Q13936-36|CACNA1C;REV__nc|ENSG00000151067|Q13936-37|CACNA1C;REV__nc|ENSG00000151067|Q13936-4|CACNA1C;REV__nc|ENSG00000151067|Q13936-5|CACNA1C;REV__nc|ENSG00000151067|Q13936-6|CACNA1C;REV__nc|ENSG00000151067|Q13936-7|CACNA1C;REV__nc|ENSG00000151067|Q13936-8|CACNA1C;REV__nc|ENSG00000151067|Q13936-9|CACNA1C;REV__nc|ENSG00000151067|Q13936|CACNA1C;REV__nc|ENSG00000157388|Q01668-2|CACNA1D;REV__nc|ENSG00000157388|Q01668-3|CACNA1D;REV__nc|ENSG00000157388|Q01668-4|CACNA1D 43.77239144664712 0.1177314611616471 4 [QT]{I|L}[W{M(Oxidation (M))|F}][QT]{I|L}S{I|L} 10 -1 + 37.284 0.0 0.0 3.0174 3.0174 64.364 0.0 0.0 0.0 5.314936654517513 1.4280253340639462 1.4280253340639462 1.7609125905568064 0 1.4049471895720984 1.0 0.6549471895720984 0.2302046884880938 [QT]{I|L}[W{M(Oxidation (M))|F}][QT]{I|L}S{I|L};[QT]{I|L}[W{M(Oxidation (M))|F}][WR]S{I|L};[QT]{I|L}[WY]{[NV]|[RG]}{I|L}S{I|L};[QT]{I|L}{[WN]|[YH]}VY{I|L}S{I|L};{[TV]|[{I|L}S]}[KG]{I|L}P{I|L}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H;{[TV]|[{I|L}S]}PN[{I|L}P]A[NS]{I|L}[NP];{[TV]|[{I|L}S]}PN[{I|L}P]KGHHH;[QT]{I|L}[W{M(Oxidation (M))|F}]{[TV]|[{I|L}S]}[WR];[QT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RVY{I|L}S{I|L};[QT]{[CP]|[EA]}GRVY{I|L}S{I|L} 3.0174;2.8748;2.8378;2.3203;1.9303;1.8613;1.7227;1.6252;1.6247;1.5271 -;-;-;-;-;-;-;-;-;- 3294 1 1.372 109498.9 1.0 12637 5034 17670 HBL1_DMSO_200M_050219_2,17673 HBL1_DMSO_200M_050219_2,17673,QTIWDLYGKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17674 94.061 162.0 473540.0 25 0 45213.0 + 34986 SQLSYYLHVI 10 93 611.8262862524264 0 611.8262817263603 PEAK CID FTMS 0 0 0 17670 373886.6875 0.5308263177626485 -1 0.1435317993164062 4 Unmodified _SQLSYYLHVI_ REV__ENSG00000120539|ENST00000375940|MASTL;REV__nc|ENSG00000120539|Q96GX5-2|MASTL;REV__nc|ENSG00000120539|Q96GX5-3|MASTL 22.736283301280096 0.276231959287006 4 {I|L} 1 -1 14.732 0.0 0.0 1.2059 0.0 0.0 893.4622821222371 212.0682161920532 1105.5304983142903 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 {I|L} 1.2059 + + 245 + 1 1.372 63748.1 1.0 12638 5034 17670 HBL1_DMSO_200M_050219_2,17674 HBL1_DMSO_200M_050219_2,17674,SQLSYYLHVI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17675 94.075 800.0 383080.0 25 0 56516.0 + 4936 DGLTVHLVI 9 106 966.5623418375716 965.5550653709714 1 966.5617553591728 MULTI CID FTMS 0 0 0 17670 222220.953125 1.0 0 0.0 5 Unmodified _DGLTVHLVI_ ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000175520|ENST00000311659|UBQLN3;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000472638.1_1_1:156020124-156021603:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;nc|ENSG00000160803|Q9NRR5-2|UBQLN4 81.61307344734483 0.0171259190214613 4 [H{I|L}]VTGD{I|L}V{I|L} 9 5 + 64.919 0.0 0.0 6.7235 6.7235 86.332 0.0 0.0 0.0 16.410553545553768 16.478174818886373 16.410553545553768 7.7815125038364386 0 0.0 1.3979400086720375 1.079689690656103 0.0 [H{I|L}]VTGD{I|L}V{I|L};[H{I|L}]S{I|L}GD{I|L}V{I|L};[H{I|L}]VD{[SA]|[TG]}{I|L}V{I|L};[H{I|L}]S{[RE]|[WV]}{I|L}V{I|L};[H{I|L}]VTG{I|L}DV{I|L};[H{I|L}]V{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}V{I|L};[H{I|L}]VV[TA]DV{I|L};[H{I|L}]V{I|L}{[SA]|[TG]}DV{I|L};{[QN]|[E{I|L}]|[KN]}[SG]VH{I|L}V{I|L};[H{I|L}]VT{[RE]|[WV]}V{I|L} 6.7235;5.9176;5.8253;5.6859;5.6376;5.1471;5.0941;5.0941;5.0239;4.9957 -;-;-;-;-;-;-;-;-;- 1803 1 1.372 201352.7 0.8899999856948853 12639 5034 17670 HBL1_DMSO_200M_050219_2,17675 HBL1_DMSO_200M_050219_2,17675,DGLTVHLVI True True DGLTVHLVI 94.074903 966.561755359173 57202090.625 17670.0 nc|ENSG00000135018|Q9UMX0-2|UBQLN1;;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;;ENSG00000175520|ENST00000311659|UBQLN3;;ENST00000472638.1_1_1:156020124-156021603:-|nuORF;;ENSG00000160803|ENST00000368309|UBQLN4;;nc|ENSG00000160803|Q9NRR5-2|UBQLN4;;ENSG00000188021|ENST00000338222|UBQLN2;;ENSG00000135018|ENST00000376395|UBQLN1 5.619665463765462 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17676 94.089 800.0 183160.0 25 0 12023.0 + 15223 IPFPNVKDLQV 11 150 635.3649043485032 1268.7152557638062 2 635.3640624880791 MULTI CID FTMS 0 0 0 17670 196482.671875 1.0 0 0.0 6 Unmodified _IPFPNVKDLQV_ ENSG00000136492|ENST00000259008|BRIP1;nc|ENSG00000136492|Q9BX63-2|BRIP1 84.5221896805406 0.0042935016478757 4 {I|L}P{M(Oxidation (M))|F}VE{I|L}{I|L}[DP]QV 11 5 + 66.37 0.0 0.0 5.2313 5.2313 70.762 0.0 0.0 0.0 14.711408738959465 1.091444694250697 1.091444694250697 1.091444694250697 0 1.174742501084005 1.5228787452803376 0.8252574989159953 1.4634679910804405 {I|L}P{M(Oxidation (M))|F}VE{I|L}{I|L}[DP]QV;{I|L}P{M(Oxidation (M))|F}VE{I|L}{I|L}[DP]N{I|L};{I|L}P{M(Oxidation (M))|F}VE{I|L}{I|L}[DP]VQ;{I|L}M{I|L}VE{I|L}{I|L}[DP]QV;{I|L}P{M(Oxidation (M))|F}[KT]KP[DP]QV;{I|L}M{I|L}VE{I|L}{I|L}[DP]N{I|L};{I|L}P{M(Oxidation (M))|F}[KT]KP[DP]N{I|L};{I|L}P{M(Oxidation (M))|F}VE{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PV;{I|L}P{M(Oxidation (M))|F}[KT]KPYY{I|L};{I|L}M{I|L}VE{I|L}{I|L}[DP]VQ 5.2313;5.1453;4.6903;4.594;4.5884;4.508;4.5024;4.2694;4.1375;4.053 -;-;-;-;-;-;-;-;-;- 6020 + 1 1.372 115851.6 0.8399999737739563 12640 5034 17670 HBL1_DMSO_200M_050219_2,17676 HBL1_DMSO_200M_050219_2,17676,IPFPNVKDLQV True True IPFPNVKDLQV 94.088734 635.364062488079 2078620.875 17670.0 ENSG00000136492|ENST00000259008|BRIP1;;nc|ENSG00000136492|Q9BX63-2|BRIP1 5.65896479288737 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17677 94.095 334.0 324330.0 25 0 45198.0 + 22160 LPPSCPLPLL 10 144 525.306363982912 0 525.3060790896416 PEAK CID FTMS 0 0 0 17670 184430.640625 1.0 0 0.0 7 Unmodified _LPPSCPLPLL_ REV__ENST00000462948.5_1_9:138392577-138393127:+|nuORF 26.88365393820708 0.2428278298207118 4 {I|L}{I|L}{[QS]|[NT]}{M(Oxidation (M))|F}T 6 -1 29.077 0.0 0.0 2.7729 0.0 0.0 228.1551075794952 128.07221399478752 356.2273215742828 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3684151806525389 0.3252574989159953 {I|L}{I|L}{[QS]|[NT]}{M(Oxidation (M))|F}T 2.7729 - 314 + 1 1.372 89940.5 1.0 12641 5034 17670 HBL1_DMSO_200M_050219_2,17677 HBL1_DMSO_200M_050219_2,17677,LPPSCPLPLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17678 94.109 800.0 447170.0 25 0 52708.0 + 17401 KMPDDVWLV 9 215 551.7839305287782 1101.5533081243564 2 551.7842285037041 MULTI CID FTMS 0 0 0 17670 176626.578125 0.167896106508631 -3 0.41729736328125 8 Unmodified _KMPDDVWLV_ ENSG00000110514|ENST00000706887|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6|MADD 53.832793166522166 0.0319663582346103 4 [DP]DVMKW{I|L}V 9 4 + 57.142 0.0 0.0 5.1874 5.1874 77.771 0.0 0.0 0.0 5.365149064598299 16.478174818886373 5.365149064598299 5.365149064598299 0 0.4247425010840047 0.0 0.8829131673969606 0.805462187404089 [DP]DVMKW{I|L}V;[VP]DDMKW{I|L}V;[PA]EEMKW{I|L}V;[W{I|L}][DG]DVW{I|L}V;[DP]DMKVW{I|L}V;[DP]DMVKW{I|L}V;[VS][HC]MKW{I|L}V;[EP]{[CP]|[EA]}MKW{I|L}V;[DP]DVWKM{I|L}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DP]DVW{I|L}V 5.1874;4.7004;4.6036;4.4712;4.3544;4.2796;4.0768;4.0016;3.9915;3.9606 -;-;-;-;-;-;-;-;-;+ + 3514 1 1.372 263767.1 0.7699999809265137 12642 5034 17670 HBL1_DMSO_200M_050219_2,17678 HBL1_DMSO_200M_050219_2,17678,KMPDDVWLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17679 94.115 367.0 299440.0 25 0 18305.0 + 45691 YWPTYTPMEV 10 116 643.7911322488482 1285.5677115644962 2 643.7915527224541 MULTI CID FTMS 0 0 0 17670 146434.84375 0.2775768675587199 -3 0.41729736328125 9 Unmodified _YWPTYTPMEV_ ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A 61.357469665136826 0.0330252915653943 4 VEDTPMEV 8 5 49.537 0.0 0.0 3.8533 0.0 0.0 367.15183129281496 0.0 367.15183129281496 0.0 11.3088744268984 0.0 0.0 0 0.8494850021680094 0.0 1.5114393726401687 0.0 VEDTPMEV 3.8533 - 3787 + 1 1.372 85933.3 1.0 12643 5034 17670 HBL1_DMSO_200M_050219_2,17679 HBL1_DMSO_200M_050219_2,17679,YWPTYTPMEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17680 94.125 478.0 316270.0 25 0 25594.0 + 14448 IFSIREVSF 9 149 549.3028090732644 1096.5910652133286 2 549.3027221560478 MULTI CID FTMS 0 0 0 17670 141039.125 1.0 0 0.0 10 Unmodified _IFSIREVSF_ ENSG00000108561|ENST00000225698|C1QBP 61.60191391372663 0.0251951588191061 4 {I|L}{M(Oxidation (M))|F}S{I|L}W{I|L}[YR] 8 5 + 55.131 0.0 0.0 5.0275 5.0275 76.688 0.0 0.0 0.0 20.133418048066787 4.956130378462476 4.956130378462476 4.956130378462476 0 0.3807196863200844 0.5228787452803376 0.6989700043360187 0.0 {I|L}{M(Oxidation (M))|F}S{I|L}W{I|L}[YR];{I|L}{M(Oxidation (M))|F}S{I|L}W[YR]{I|L};{I|L}{M(Oxidation (M))|F}S{I|L}[QA][KG]S{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}S{I|L}{[DA]|[EG]}{I|L}[YR];{I|L}{M(Oxidation (M))|F}S{[QV]|[N{I|L}]|[RA]|[KV]}[RN]S{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}S{I|L}{[QG]|[NA]}[KA]S{M(Oxidation (M))|F};{[TV]|[{I|L}S]}H{I|L}W{I|L}SE{I|L};{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]P[KA]S{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}S{I|L}{[DA]|[EG]}[YR]{I|L};{I|L}{M(Oxidation (M))|F}S{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{M(Oxidation (M))|F}{I|L} 5.0275;4.5755;4.2858;4.1828;3.8453;3.8125;3.7909;3.7659;3.7309;3.678 -;-;-;-;-;-;-;-;-;- 1149 + 1 1.372 118750.0 1.0 12644 5034 17670 HBL1_DMSO_200M_050219_2,17680 HBL1_DMSO_200M_050219_2,17680,IFSIREVSF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17681 94.139 800.0 97306.0 25 0 9884.6 + 9241 FGWEDALHTV 10 132 587.7804415620366 1173.546330190873 2 587.7812377810478 MULTI CID FTMS 0 0 0 17670 95123.078125 1.0 0 0.0 11 Unmodified _FGWEDALHTV_ ENSG00000112679|ENST00000419235|DUSP22;ENST00000604988.1_1_6:338073-350865:+|nuORF;nc|ENSG00000112679|Q9NRW4|DUSP22 78.14939416004806 0.0185844602684931 4 {M(Oxidation (M))|F}GWED[{I|L}A]HS{I|L} 10 2 + 68.211 0.0 0.0 5.8124 5.8124 74.531 0.0 0.0 0.0 11.505149978319906 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.805462187404089 0.0 1.9802046884880933 0.0 {M(Oxidation (M))|F}GWED[{I|L}A]HS{I|L};{M(Oxidation (M))|F}GWED[{I|L}A]HTV;{M(Oxidation (M))|F}G{[DA]|[EG]}E[W{I|L}]HS{I|L};{M(Oxidation (M))|F}G[VS]E[W{I|L}]HS{I|L};{M(Oxidation (M))|F}G{[DA]|[EG]}E[W{I|L}]HTV;{M(Oxidation (M))|F}G[VS]E[W{I|L}]HTV;{[TV]|[{I|L}S]}H{I|L}{[CT]|[{M(Oxidation (M))|F}G]}EWGE;{M(Oxidation (M))|F}GW{M(Oxidation (M))|F}VT{[MS]|[{M(Oxidation (M))|F}A]}S{I|L};{M(Oxidation (M))|F}GW{M(Oxidation (M))|F}VT{[MS]|[{M(Oxidation (M))|F}A]}TV;{[TV]|[{I|L}S]}H{[CP]|[EA]}V{M(Oxidation (M))|F}WGE 5.8124;5.6624;5.0667;5.0667;4.9167;4.9167;4.5563;4.5456;4.3955;4.2319 -;+;-;-;-;-;-;-;-;- + 2267 + 1 1.372 66751.6 0.5299999713897705 12645 5034 17670 HBL1_DMSO_200M_050219_2,17681 HBL1_DMSO_200M_050219_2,17681,FGWEDALHTV True True FGWEDALHTV 94.139015 587.781237781048 964425.3125 17670.0 nc|ENSG00000112679|Q9NRW4|DUSP22;;ENSG00000112679|ENST00000419235|DUSP22;;ENST00000604988.1_1_6:338073-350865:+|nuORF 7.845460255940755 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17682 94.153 800.0 199680.0 25 0 19832.0 + 17291 KLQEVLDYL 9 175 560.8176667438831 0 560.8177368044853 PEAK CID FTMS 0 0 0 17670 97493.4609375 1.0 0 0.0 12 Unmodified _KLQEVLDYL_ ENSG00000144744|ENST00000361055|UBA3;nc|ENSG00000144744|Q8TBC4-2|UBA3 41.95555342248728 0.0536712386667488 4 YD{I|L}K{I|L}Q 6 8 32.711 0.0 0.0 2.9216 0.0 0.0 131.09876742928924 225.089166509436 356.1879339387252 0.0 0.0 0.0 0.0 0 0.7396518287104438 0.0 0.0 0.9361818737241734 YD{I|L}K{I|L}Q 2.9216 - 169 + 1 1.372 120350.9 0.5 12646 5034 17670 HBL1_DMSO_200M_050219_2,17682 HBL1_DMSO_200M_050219_2,17682,KLQEVLDYL True True KLQEVLDYL 94.152846 560.817736804485 1499742.0 17670.0 ENSG00000144744|ENST00000361055|UBA3;;nc|ENSG00000144744|Q8TBC4-2|UBA3 3.9816786448160806 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17684 94.158 28.0 2191800.0 25 0 404330.0 + 4673 DAYVLPKLYV 10 71 590.8342673449122 1179.6539817566245 2 590.8347045779228 MULTI CID FTMS 0 0 0 17683 1732489.625 0.0495889580285705 3 -0.2977752685546875 1 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 43.77239144664712 0.1177314611616471 4 {[DA]|[EG]}YV{I|L} 5 5 41.031 0.0 0.0 3.4782 0.0 0.0 0.0 615.3514664580492 615.3514664580492 1.217327760564686 0.0 0.0 0.0 0 1.5 1.5228787452803376 0.0 0.0 + {[DA]|[EG]}YV{I|L} 3.4782 + + 148 1 1.372 52955.4 1.0 12647 5035 17683 HBL1_DMSO_200M_050219_2,17684 HBL1_DMSO_200M_050219_2,17684,DAYVLPKLYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17685 94.159 48.0 2057400.0 25 0 374090.0 + 4934 DGLTVHLVI 9 95 483.7847146685895 965.5548764039788 2 483.7849304080009 MULTI CID FTMS 0 0 0 17683 1111593.0 0.5054699528028783 1 -0.0801467895507812 2 Unmodified _DGLTVHLVI_ ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000175520|ENST00000311659|UBQLN3;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000472638.1_1_1:156020124-156021603:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;nc|ENSG00000160803|Q9NRR5-2|UBQLN4 67.34385681178166 0.0221257235307089 4 S{I|L}VWV{I|L} 6 5 50.795 0.0 0.0 5.2607 0.0 0.0 250.1434040753922 0.0 250.1434040753922 0.0 30.108441128437704 0.0 0.0 0 0.3054621874040891 0.0 0.9604093769761876 0.0 S{I|L}VWV{I|L} 5.2607 - 976 1 1.372 80280.2 1.0 12648 5035 17683 HBL1_DMSO_200M_050219_2,17685 HBL1_DMSO_200M_050219_2,17685,DGLTVHLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17686 94.16 26.0 2759900.0 25 0 510840.0 + 13281 HIPDVITYL 9 61 535.7982331066675 1069.5819132801348 2 535.7979003787041 MULTI CID FTMS 0 0 0 17683 2200164.25 0.9530884800781474 -1 0.1140899658203125 3 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 36.04419817259434 0.0971720506436186 4 [H{I|L}][DP]V{I|L}TY{I|L} 9 0 + 45.581 0.0 0.0 4.2616 4.2616 69.529 0.0 0.0 0.0 2.498774732165998 8.384767769392738 2.498774732165998 2.498774732165998 0 0.6989700043360187 1.5228787452803376 0.5 0.0 + + [H{I|L}][DP]V{I|L}TY{I|L};[VP]D{I|L}H{I|L}TY{I|L};[H{I|L}][DP]VT{I|L}Y{I|L};[DP]V{I|L}H{I|L}TY{I|L};[VP]D{I|L}TH{I|L}Y{I|L};[VP]D{I|L}HT{I|L}Y{I|L};[DP]V{I|L}TH{I|L}Y{I|L};[DP]V{I|L}HT{I|L}Y{I|L};[H{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{I|L}Y{I|L};[YT][R{I|L}]E{I|L}Y{I|L} 4.2616;4.0279;3.9801;3.8205;3.7679;3.7465;3.5605;3.5391;2.907;2.6041 +;-;-;-;-;-;-;-;-;- + 284 1 1.372 63922.8 1.0 12649 5035 17683 HBL1_DMSO_200M_050219_2,17686 HBL1_DMSO_200M_050219_2,17686,HIPDVITYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17687 94.161 35.0 2017500.0 25 0 647660.0 + 33552 SILQSLVPA 9 73 464.27923834065695 926.543923748114 2 464.2792541384697 MULTI CID FTMS 0 0 0 17683 1834541.625 0.9507454300830251 1 -0.0801467895507812 4 Unmodified _SILQSLVPA_ ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 39.957323273325 0.0756908302845263 4 {[TV]|[{I|L}S]}Q{I|L}S 5 5 40.278 0.0 0.0 4.3471 0.0 0.0 0.0 395.2279196800077 395.2279196800077 18.7684116877481 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.274227503252014 0.0 {[TV]|[{I|L}S]}Q{I|L}S 4.3471 - 476 1 1.372 60767.0 1.0 12650 5035 17683 HBL1_DMSO_200M_050219_2,17687 HBL1_DMSO_200M_050219_2,17687,SILQSLVPA True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17688 94.162 36.0 1614200.0 25 0 181420.0 + 30128 QVLEDFPTI 9 83 531.2795055907297 1060.5444582482594 2 531.2795898318291 MULTI CID FTMS 0 0 0 17683 1589418.875 0.7213726227272568 -1 0.1140899658203125 5 Unmodified _QVLEDFPTI_ ENSG00000079459|ENST00000220584|FDFT1;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1 74.92900055777586 0.0191935851694334 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}ED{M(Oxidation (M))|F} 6 3 45.636 0.0 0.0 4.3031 0.0 0.0 0.0 326.174513897782 326.174513897782 11.131195466887108 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.5 0.5709991640913001 + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}ED{M(Oxidation (M))|F} 4.3031 + + 363 1 1.372 55530.6 1.0 12651 5035 17683 HBL1_DMSO_200M_050219_2,17688 HBL1_DMSO_200M_050219_2,17688,QVLEDFPTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17689 94.165 104.0 598920.0 25 0 39267.0 + 5655 DPFAFIHKI 9 93 544.3004480669223 1086.5863432006445 2 544.3004638552666 MULTI CID FTMS 0 0 0 17683 431702.34375 0.0427890947920493 4 -0.4070587158203125 6 Unmodified _DPFAFIHKI_ ENSG00000117139|ENST00000367265|KDM5B;nc|ENSG00000117139|Q9UGL1-2|KDM5B 62.57269311338072 0.0246576765497938 4 DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L} 9 0 + 96.998 0.0 0.0 8.9268 8.9268 98.505 0.0 0.0 0.0 64.14417724780014 11.962724883926654 11.962724883926654 54.9607625286837 0 1.6549471895720984 2.0 0.0 0.2134679910804404 + + DP{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}HK{I|L};DY[W{I|L}]{I|L}HK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG][KG]{I|L}{M(Oxidation (M))|F}{[HG]|PP};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A[{I|L}P]A[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[HK]{I|L}{M(Oxidation (M))|F}A[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VPR[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{[VA]|[{I|L}G]}{I|L}[Y{I|L}]{[HG]|PP};[PS]{[NV]|[RG]}AK[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[PS]{[NV]|[RG]}KA[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[Q{I|L}]{I|L}[Y{I|L}]{[HG]|PP} 8.9268;3.8687;2.0681;1.2816;1.1358;0.98616;0.89472;0.87009;0.87009;0.84764 +;-;-;-;-;-;-;-;-;- + 357 + 1 1.372 54880.7 1.0 12652 5035 17683 HBL1_DMSO_200M_050219_2,17689 HBL1_DMSO_200M_050219_2,17689,DPFAFIHKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17690 94.169 246.0 311650.0 25 0 59216.0 29954 QSPQPGAHLL 10 120 524.2819313361884 1046.5493097391768 2 524.7881347537041 MULTI CID FTMS 0 0 0 17683 210880.421875 1.0 0 0.0 7 Unmodified _QSPQPGAHLL_ ENST00000513544.5_1_17:48545259-48551043:+|nuORF 19.256988751693697 0.5244284437930726 4 [EP]{I|L}{I|L}{[QS]|[NT]}{M(Oxidation (M))|F}T{I|L} 9 8 + 50.256 0.0 0.0 4.8021 4.8021 76.562 0.0 0.0 0.0 30.695990759876103 14.973024840566469 14.973024840566469 5.796896906561031 0 0.0 0.0 0.9291746928241128 0.6861818737241735 [EP]{I|L}{I|L}{[QS]|[NT]}{M(Oxidation (M))|F}T{I|L};[EP]{I|L}{[QS]|[NT]}{I|L}{M(Oxidation (M))|F}T{I|L};[EP]{I|L}E[KA]{M(Oxidation (M))|F}T{I|L};[EP]{[QS]|[NT]}{I|L}{I|L}{M(Oxidation (M))|F}T{I|L};[EP]{I|L}{[QS]|[NT]}[YT]P{I|L};[H{I|L}]E{[QS]|[NT]}{I|L}{I|L}[HA];[EP]{I|L}{[QS]|[NT]}[{M(Oxidation (M))|F}T]{I|L}{I|L};[EP]{I|L}{I|L}[YR]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[H{I|L}]E{I|L}{[QS]|[NT]}{I|L}[HA];[EP]{I|L}[KG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{I|L} 4.8021;4.2482;3.9605;3.4285;2.938;2.8678;2.6504;2.5853;2.3139;2.2866 -;-;-;-;-;-;-;-;-;- 533 + 1 1.372 67339.0 1.0 12653 5035 17683 HBL1_DMSO_200M_050219_2,17690 HBL1_DMSO_200M_050219_2,17690,QSPQPGAHLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17691 94.177 463.0 282340.0 25 0 25874.0 + 9656 FLPDPSALQNL 11 138 607.8244566049905 1213.6343602767809 2 607.8240844607353 MULTI CID FTMS 0 0 0 17683 203722.875 0.1536166407635782 3 -0.2977752685546875 8 Unmodified _FLPDPSALQNL_ ENSG00000158019|ENST00000379624|BABAM2;nc|ENSG00000158019|Q9NXR7-1|BABAM2;nc|ENSG00000158019|Q9NXR7-3|BABAM2;nc|ENSG00000158019|Q9NXR7-4|BABAM2 51.629811660486645 0.1086041609037681 4 [DP][PS]A{I|L}QD{I|L} 9 3 39.059 0.0 0.0 3.2184 0.0 0.0 0.0 274.1543142961984 274.1543142961984 14.464237598503589 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.2218487496163564 0.3252574989159953 [DP][PS]A{I|L}QD{I|L} 3.2184 - 3319 1 1.372 100825.7 1.0 12654 5035 17683 HBL1_DMSO_200M_050219_2,17691 HBL1_DMSO_200M_050219_2,17691,FLPDPSALQNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17692 94.18 155.0 401050.0 25 0 25804.0 + 38324 TQLEEPLITL 10 95 578.8268756081396 0 578.8268310427666 PEAK CID FTMS 0 0 0 17683 187885.0625 0.8312719023299531 -1 0.1140899658203125 9 Unmodified _TQLEEPLITL_ REV__ENSG00000198315|ENST00000330236|ZKSCAN8;REV__nc|ENSG00000198315|Q15776-2|ZKSCAN8 18.721224879955976 0.3085704076828365 4 {I|L}TQ{I|L}E 5 -1 26.837 0.0 0.0 2.3223 0.0 0.0 345.2260035582729 223.07293115787343 568.2989347161464 0.0 0.0 0.0 0.0 0 0.5 0.0 0.7134679910804405 0.0 {I|L}TQ{I|L}E 2.3223 - 204 + 1 1.372 53995.0 1.0 12655 5035 17683 HBL1_DMSO_200M_050219_2,17692 HBL1_DMSO_200M_050219_2,17692,TQLEEPLITL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17693 94.187 391.0 284540.0 25 0 9556.9 + 29654 RFPNFTNQLL 10 151 625.3349845114639 1248.6554160897276 2 625.3339111208916 MULTI CID FTMS 0 0 0 17683 154642.859375 0.7619700008191618 -1 0.1140899658203125 10 Unmodified _QNLLNFMIGSI_ ENSG00000168538|ENST00000334690|TRAPPC11 33.4449034751529 0.3133739643825231 4 [{I|L}A]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}TNQ{I|L}{I|L} 11 7 + 53.153 0.0 0.0 4.2568 4.2568 72.377 0.0 0.0 0.0 4.033823995441594 16.575773191777934 4.033823995441594 4.033823995441594 0 0.25 0.5528419686577808 0.3807196863200844 0.3807196863200844 [{I|L}A]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}TNQ{I|L}{I|L};{[TV]|[{I|L}S]}[WQ]{M(Oxidation (M))|F}TNQ{I|L}{I|L};[AG]A{I|L}{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}TNQ{I|L}{I|L};[AG]V{[WT]|[RM]}{M(Oxidation (M))|F}TNQ{I|L}{I|L};[AG]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}TNQ{I|L}{I|L};[AG]W{[TV]|[{I|L}S]}{M(Oxidation (M))|F}TNQ{I|L}{I|L};[AG]{I|L}A{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}TNQ{I|L}{I|L};[AG]N{I|L}EMS[KS]S{I|L}{I|L};[R{M(Oxidation (M))|F}][NP]{M(Oxidation (M))|F}TNQ{I|L}{I|L};[{I|L}A]Q{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}TNQ{I|L}{I|L} 4.2568;3.9338;3.9107;3.8874;3.8;3.8;3.7697;3.7323;3.7232;3.697 -;-;-;-;-;-;-;-;-;- 3748 1 1.372 89710.4 1.0 12656 5035 17683 HBL1_DMSO_200M_050219_2,17693 HBL1_DMSO_200M_050219_2,17693,QNLLNFMIGSI False False RFPNFTNQLL 94.187492 625.333911120892 512701.125 17683.0 ENSG00000168538|ENST00000334690|TRAPPC11 4.440440018971761 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17694 94.194 348.0 305370.0 25 0 40489.0 + 35826 SVLDDKLVFV 10 124 567.8248234077364 0 567.8256713747978 PEAK CID FTMS 0 0 0 17683 145067.5625 0.3991171238914505 -2 0.2576217651367187 11 Unmodified _SVLDDKLVFV_ ENSG00000177119|ENST00000320560|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF;nc|ENSG00000177119|Q4KMQ2-2|ANO6;nc|ENSG00000177119|Q4KMQ2-3|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6 61.08992128646608 0.0224639510797913 4 {M(Oxidation (M))|F}VSV{I|L}{I|L}DG 8 8 65.791 0.0 0.0 5.8035 0.0 0.0 117.07468236059148 183.07796655826408 300.1526489188556 0.0 0.0 0.0 0.0 0 1.2887254899964358 0.0 2.0743923658886185 0.0 {M(Oxidation (M))|F}VSV{I|L}{I|L}DG 5.8035 - 1013 + 1 1.372 86409.8 1.0 12657 5035 17683 HBL1_DMSO_200M_050219_2,17694 HBL1_DMSO_200M_050219_2,17694,SVLDDKLVFV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17695 94.208 800.0 189680.0 25 0 16704.0 + 24085 LYGEPLRI 8 147 480.7793613247879 959.5441697163758 2 480.7791015505791 MULTI CID FTMS 0 0 0 17683 99771.546875 0.52925438492521 -4 0.5313873291015625 12 Unmodified _LYGEPLRI_ REV__ENSG00000102225|ENST00000357227|CDK16;REV__ENST00000428400.5_1_X:47082893-47085639:+|nuORF;REV__ENST00000522234.5_1_X:47078210-47085639:+|nuORF;REV__nc|ENSG00000102225|Q00536-2|CDK16;REV__nc|ENSG00000102225|Q00536-3|CDK16 24.67388899826682 0.525179942228231 4 [VS]{M(Oxidation (M))|F}E{I|L}[RP]{I|L} 8 -1 + 54.032 0.0 0.0 5.6311 5.6311 72.801 0.0 0.0 0.0 26.981048713086423 6.699536209249985 6.699536209249985 1.249387366082999 0 0.4247425010840047 2.0 0.3252574989159953 0.2887254899964357 [VS]{M(Oxidation (M))|F}E{I|L}[RP]{I|L};[VS]{M(Oxidation (M))|F}EP[R{I|L}]{I|L};[VS]{M(Oxidation (M))|F}{I|L}E[RP]{I|L};[VS]{M(Oxidation (M))|F}PE[R{I|L}]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}[PA];[AG]KK{I|L}E{M(Oxidation (M))|F}[PA];[VS]{M(Oxidation (M))|F}{I|L}[W{I|L}]PV;[VS]{M(Oxidation (M))|F}P[K{I|L}][NG]V;[VS]{M(Oxidation (M))|F}{I|L}[KP][NG]V;[AG]KKE{I|L}{M(Oxidation (M))|F}[PA] 5.6311;5.5008;4.8182;4.6201;2.9558;2.3371;2.2993;2.1055;1.901;1.5242 -;-;-;-;-;-;-;-;-;- 549 + 1 1.372 116658.4 0.4699999988079071 12658 5035 17683 HBL1_DMSO_200M_050219_2,17695 HBL1_DMSO_200M_050219_2,17695,LYGEPLRI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17696 94.221 800.0 235720.0 25 0 9972.5 + -1 PMLSYRLCL 9 174 576.796511644364 1151.578470355528 2 577.2990600466728 MULTI CID FTMS 0 0 0 17683 103694.046875 0.4574948238652728 -7 0.8216094970703125 13 Carbamidomethyl (C) _PMLSYRLC(Carbamidomethyl (C))L_ REV__ENST00000555139.1_1_14:74961475-74961700:+|nuORF 12.531546534597751 0.4974689918368763 4 PY{I|L}P{I|L}[KP]D{I|L} 9 -1 29.664 0.0 0.0 2.5759 0.0 0.0 96.97292175862717 0.0 96.97292175862717 0.0 1.7731749024395749 0.0 0.0 0 0.4247425010840047 0.0 1.7614393726401687 0.0 PY{I|L}P{I|L}[KP]D{I|L} 2.5759 - 1791 + 1 1.372 144779.7 0.5299999713897705 12659 5035 17683 HBL1_DMSO_200M_050219_2,17696 HBL1_DMSO_200M_050219_2,17696,PMLSYRLCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17697 94.233 661.0 285080.0 25 0 43212.0 + 21111 LPALPQQLI 9 174 496.8105954550242 991.6066379768486 2 496.8105651736259 MULTI CID FTMS 0 0 0 17683 83383.296875 0.7426131537434777 -1 0.1140899658203125 14 Unmodified _LPALPQQLI_ ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3 56.541270873467816 0.0279970378729908 4 [{I|L}P]A{I|L}PQQ{I|L}{I|L} 9 0 + 33.575 0.0 0.0 3.3859 3.3859 63.894 0.0 0.0 0.0 0.9330588873923062 4.806730914683413 0.9330588873923062 0.9330588873923062 0 0.8539171939081174 0.958607314841775 0.0 0.0 + + [{I|L}P]A{I|L}PQQ{I|L}{I|L};{I|L}{I|L}[PA]PQQ{I|L}{I|L};[AG]PQ{I|L}[PA]{I|L}{I|L}{I|L};[{I|L}P]A{I|L}PQ[AG]{I|L}{I|L};[{I|L}P]A{I|L}P[AG]Q{I|L}{I|L};{I|L}{I|L}[PA]P[AG]Q{I|L}{I|L};{I|L}{I|L}[PA]PQ[AG]{I|L}{I|L};[QP]Q{I|L}[PA]{I|L}{I|L}{I|L};[PA]{I|L}{I|L}PQQ{I|L}{I|L};{I|L}{I|L}AA{I|L}HE{I|L}{I|L} 3.3859;3.2918;2.6574;2.4573;2.4573;2.3632;2.3632;2.3379;2.0961;1.927 +;-;-;-;-;-;-;-;-;- + 1715 1 1.372 143798.9 1.0 12660 5035 17683 HBL1_DMSO_200M_050219_2,17697 HBL1_DMSO_200M_050219_2,17697,LPALPQQLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17699 94.238 14.0 4504900.0 25 0 621710.0 + 43947 YGLPVVVKL 9 72 494.31525568050944 986.6159584278188 2 494.3152038455009 MULTI CID FTMS 0 0 0 17698 2654473.5 0.4479894574176664 2 -0.2176284790039062 1 Unmodified _YGLPVVVKL_ ENSG00000168036|ENST00000349496|CTNNB1 39.957323273325 0.0756908302845263 4 YG{I|L}PVVVK{I|L} 9 0 + 55.058 0.0 0.0 5.5805 5.5805 78.629 0.0 0.0 0.0 12.143127141856397 12.05136871872881 12.05136871872881 4.771212547196619 0 0.718765315847925 1.3010299956639813 0.0 0.0 + + YG{I|L}PVVVK{I|L};YG{I|L}PVVKV{I|L} 5.5805;5.0969 +;- + 117 + 1 1.376 51607.5 1.0 12661 5036 17698 HBL1_DMSO_200M_050219_2,17699 HBL1_DMSO_200M_050219_2,17699,YGLPVVVKL True True YGLPVVVKL 94.237669 494.315203845501 156080496.0 17698.0 ENSG00000168036|ENST00000349496|CTNNB1 6.962555567423503 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17700 94.239 44.0 1237100.0 25 0 263250.0 + 13595 HPLVILNI 8 76 459.7921069692591 917.5696610053184 2 459.7923156619072 MULTI CID FTMS 0 0 0 17698 1177354.0 0.0969505976479462 3 -0.3269119262695312 2 Unmodified _HPLVILNI_ ENSG00000168090|ENST00000303904|COPS6;ENST00000465027.1_1_7:99686595-99687052:+|nuORF;ENST00000496358.1_1_7:99686670-99688376:+|nuORF 38.99230528602208 0.2511498934509823 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L} 8 0 + 55.367 0.0 0.0 6.0341 6.0341 90.075 0.0 0.0 0.0 24.291746928241125 39.88228758605111 24.291746928241125 26.844471979274186 0 0.7429928190999391 0.0 1.7302046884880935 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V{I|L}{I|L}N{I|L};[{I|L}P]HV{I|L}{I|L}N{I|L};[{I|L}P]VH{I|L}{I|L}N{I|L};[{I|L}P]V{I|L}H{I|L}N{I|L} 6.0341;3.1085;3.1085;2.7804 +;-;-;- + 72 1 1.376 49197.7 1.0 12662 5036 17698 HBL1_DMSO_200M_050219_2,17700 HBL1_DMSO_200M_050219_2,17700,HPLVILNI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17701 94.24 14.0 4631000.0 25 0 541690.0 41761 VPVALFKVL 9 74 493.32405816567103 984.633563398142 2 493.3242065310478 MULTI CID FTMS 0 0 0 17698 3020985.25 0.7356658755358549 2 -0.2176284790039062 3 Unmodified _VPVALFKVL_ ENST00000320583.9_3_7:99162026-99162146:+|nuORF 24.67388899826682 0.2172451872415813 4 SV{I|L}TV{I|L} 6 5 29.095 0.0 0.0 2.9549 0.0 0.0 354.23399550605626 0.0 354.23399550605626 0.0 -1.4858490779679236 -1.4858490779679236 0.0 0 0.5924778212679485 0.0 0.5 0.0 SV{I|L}TV{I|L} 2.9549 - 216 1 1.376 60110.4 1.0 12663 5036 17698 HBL1_DMSO_200M_050219_2,17701 HBL1_DMSO_200M_050219_2,17701,VPVALFKVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17702 94.241 22.0 2678300.0 25 0 395690.0 + + 25296 MTDPIRILV 9 67 528.8060824149661 1055.597611896732 2 529.3079711794853 MULTI CID FTMS 0 0 0 17698 2472724.5 1.0 0 0.0 4 Unmodified _NAEEILRIV_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 11.640296217721598 0.521594087909532 4 [MT]D 3 -1 31.739 0.0 0.0 3.0067 0.0 0.0 0.0 705.4587013344852 705.4587013344852 14.916440611282624 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.8807196863200843 0.0 [MT]D 3.0067 - 55 1 1.376 52636.9 1.0 12664 5036 17698 HBL1_DMSO_200M_050219_2,17702 HBL1_DMSO_200M_050219_2,17702,NAEEILRIV False False MTDPIRILV 94.241241 529.307971179485 89040432.0 17698.0 ENSG00000141543|ENST00000649764|EIF4A3;;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 6.368202845255534 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17703 94.242 44.0 1161900.0 25 0 186440.0 + 20426 LLIENVASL 9 75 486.29226213170926 970.5699713302186 2 486.2926208376884 MULTI CID FTMS 0 0 0 17698 1425417.625 0.1089002361946171 4 -0.422698974609375 5 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 39.957323273325 0.0756908302845263 4 {I|L}{I|L}[DN]{I|L}{I|L}AS{I|L} 9 4 {I|L}{I|L}[DN]{I|L}{I|L} + + 30.467 29.71 4.3601 3.1391 3.1391 46.231 0.0 0.0 0.0 0.0 8.991166005319577 0.0 0.0 0 0.5 0.0 0.6505149978319906 0.0 {I|L}{I|L}[DN]{I|L}{I|L}AS{I|L} 3.1391 - 375 + 1 1.376 47840.8 1.0 12665 5036 17698 HBL1_DMSO_200M_050219_2,17703 HBL1_DMSO_200M_050219_2,17703,LLIENVASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17704 94.246 160.0 595000.0 25 0 39962.0 + 29456 QLIDKVWQL 9 123 571.8319195065559 1141.6492860799117 2 571.8325073122978 MULTI CID FTMS 0 0 0 17698 465302.8125 0.0562135382112931 -3 0.3377685546875 6 Unmodified _QLIDKVWQL_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 160.51597146486608 0.0010047773005512 4 [Q{I|L}]{I|L}TWQ{I|L}Q{I|L} 9 4 + 75.79 0.0 0.0 6.6386 6.6386 79.057 0.0 0.0 0.0 13.906629545409984 16.478174818886373 13.906629545409984 2.5134875797167666 0 1.0 1.6989700043360187 0.6861818737241735 1.2887254899964358 [Q{I|L}]{I|L}TWQ{I|L}Q{I|L};[Q{I|L}]{I|L}T[Q{I|L}]WQ{I|L};[Q{I|L}]{I|L}TWQ{I|L}[AG]{I|L};[Q{I|L}]{I|L}TW[AG]{I|L}Q{I|L};[Q{I|L}]{I|L}T[Q{I|L}]W[AG]{I|L};[Q{I|L}]T{I|L}WQ{I|L}Q{I|L};[Q{I|L}]{I|L}{[CA]|SS}{I|L}Q{I|L}Q{I|L};[Q{I|L}]{I|L}{[CA]|SS}Q{I|L}{I|L}Q{I|L};[AG]{I|L}{I|L}TWQ{I|L}Q{I|L};[Q{I|L}]T{I|L}[Q{I|L}]WQ{I|L} 6.6386;6.4185;5.8321;5.8321;5.6119;5.5747;5.5645;5.4952;5.4205;5.3545 -;-;-;-;-;-;-;-;-;- 3397 1 1.376 77103.2 1.0 12666 5036 17698 HBL1_DMSO_200M_050219_2,17704 HBL1_DMSO_200M_050219_2,17704,QLIDKVWQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17705 94.249 186.0 381050.0 25 0 25329.0 + 44586 YPFINSRIITV 11 69 661.8768817256396 1321.739210518079 2 661.8773681521416 MULTI CID FTMS 0 0 0 17698 325492.4375 0.159469382085881 4 -0.422698974609375 7 Unmodified _YPFINSRIITV_ ENSG00000037474|ENST00000264670|NSUN2;ENST00000502932.1_1_5:6604245-6604729:-|nuORF;ENST00000513888.5_1_5:6600041-6604993:-|nuORF;nc|ENSG00000037474|Q08J23-2|NSUN2;nc|ENSG00000037474|Q08J23-3|NSUN2 49.74193281347159 0.1190592179673825 4 YP{M(Oxidation (M))|F}{I|L}N 5 6 67.691 0.0 0.0 5.1213 0.0 0.0 0.0 684.4030796270896 684.4030796270896 39.98773768811724 0.0 0.0 0.0 0 1.274227503252014 1.6989700043360187 0.0 0.0 + YP{M(Oxidation (M))|F}{I|L}N 5.1213 + + 266 + 1 1.376 60889.0 1.0 12667 5036 17698 HBL1_DMSO_200M_050219_2,17705 HBL1_DMSO_200M_050219_2,17705,YPFINSRIITV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17706 94.252 107.0 567970.0 25 0 53629.0 41504 VPNALGEPQV 10 86 512.2792297186097 1022.5439065040194 2 512.2798950076103 MULTI CID FTMS 0 0 0 17698 263466.25 0.0497751377516835 8 -0.71160888671875 8 Unmodified _VPNALGEPQV_ chr12:6775548-6777791|38|44.16|0.6|6.2|+|0|LAG3,LAG3|1;chr12:6775559-6777791|23|24.83|0.06|8.62|+|0|None,LAG3|1;chr12:6777316-6777791|21|34.81|0.03|9.99|+|0|None,LAG3|1 20.453626601364224 0.5043500229302764 4 [{I|L}P]DAAY 6 8 24.267 0.0 0.0 2.3732 0.0 0.0 0.0 389.2186250921631 389.2186250921631 -4.392008512228323 0.0 -4.392008512228323 0.0 0 0.0 1.3010299956639813 0.0 0.0 [{I|L}P]DAAY 2.3732 - 231 1 1.376 54923.2 1.0 12668 5036 17698 HBL1_DMSO_200M_050219_2,17706 HBL1_DMSO_200M_050219_2,17706,VPNALGEPQV False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 17707 94.257 300.0 384770.0 25 0 52731.0 + 21538 LPIVPQLQV 9 125 503.8182744850298 1005.6219960368596 2 503.8180419802666 MULTI CID FTMS 0 0 0 17698 135423.71875 0.2900171739226747 -2 0.1942367553710937 9 Unmodified _LPIVPQLQV_ ENSG00000095015|ENST00000399503|MAP3K1 53.57557251787612 0.0325303259649373 4 {I|L}{I|L}PVPQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 39.635 0.0 0.0 3.9414 3.9414 66.105 0.0 0.0 0.0 1.249387366082999 5.6424927368726046 1.249387366082999 1.249387366082999 0 0.5866968715561641 1.6989700043360187 0.0 0.0 {I|L}{I|L}PVPQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]{I|L}VPQ{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[QP]{I|L}{I|L}[VP]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}PVP[AG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[AG]P{I|L}{I|L}[VP]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]{I|L}VP[AG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]Q{I|L}[VP]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}PVPVAA{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}PQ[VP]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]{I|L}VPVAA{[QV]|[N{I|L}]|[RA]|[KV]} 3.9414;3.8171;3.1767;3.0257;3.0179;2.9015;2.8774;2.7264;2.7023;2.6021 -;+;-;-;-;-;-;-;-;- + 919 1 1.376 91207.1 1.0 12669 5036 17698 HBL1_DMSO_200M_050219_2,17707 HBL1_DMSO_200M_050219_2,17707,LPIVPQLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17708 94.271 800.0 209930.0 25 0 15209.0 + 29070 QELENYIRSI 10 151 632.8310429545228 1263.6475329758457 2 632.8317138552666 MULTI CID FTMS 0 0 0 17698 137560.03125 0.5417352206207668 -2 0.1942367553710937 10 Unmodified _QELENYIRSI_ REV__L1PB1_dup10052|chr12:47254957-47257203:+|1.548341044108226|0.3758641288713036|2.04|48.0|63|3|sense 49.55428908609986 0.0827668555218455 4 S{I|L}GK{I|L}{[WN]|[YH]}S{I|L} 9 -1 45.231 0.0 0.0 3.5794 0.0 0.0 247.07852216732263 0.0 247.07852216732263 0.0 21.81417813229345 0.0 0.0 0 0.3494850021680094 0.0 1.0994850021680094 0.566901560044258 S{I|L}GK{I|L}{[WN]|[YH]}S{I|L} 3.5794 - 1951 + 1 1.376 133881.2 0.6100000143051147 12670 5036 17698 HBL1_DMSO_200M_050219_2,17708 HBL1_DMSO_200M_050219_2,17708,QELENYIRSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17709 94.279 466.0 247760.0 25 0 42625.0 42541 VTMLMLML 8 141 476.2585724278185 950.502591922437 2 476.2590515017509 MULTI CID FTMS 0 0 0 17698 115356.4921875 0.8632775831271846 1 -0.0889053344726562 11 Unmodified _VTMLMLML_ ENSG00000163527|ENST00000295770|STT3B 15.768221252438446 0.6779680726941459 4 {[TV]|[{I|L}S]}A 3 6 19.225 0.0 0.0 2.0226 0.0 0.0 0.0 676.3259921512057 676.3259921512057 5.299632233774428 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}A 2.0226 - 603 1 1.376 92832.0 1.0 12671 5036 17698 HBL1_DMSO_200M_050219_2,17709 HBL1_DMSO_200M_050219_2,17709,VTMLMLML False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17710 94.293 800.0 160300.0 25 0 41115.0 -1 0 128 574.6793073596366 1721.0160926791095 3 574.6794921755791 MULTI CID FTMS 0 0 0 17698 108192.09375 0.6165408646663003 -1 0.0801467895507812 12 4 {I|L} 1 -1 12.764 0.0 0.0 0.74167 0.0 0.0 1589.920952153522 0.0 1589.920952153522 0.0 2.5831489800166807 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.74167 - 387 + 1 1.376 104808.7 0.5199999809265137 12672 5036 17698 HBL1_DMSO_200M_050219_2,17710 HBL1_DMSO_200M_050219_2,17710, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17711 94.307 800.0 141900.0 25 0 13303.0 -1 KNCWWMNNSL 10 111 705.8005353605643 1409.5865177879284 2 705.8030883669853 MULTI CID FTMS 0 0 0 17698 101981.3984375 0.8371351391285589 -1 0.0801467895507812 13 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))KNC(Carbamidomethyl (C))WWM(Oxidation (M))NNSL_ ENST00000485445.5_1_12:111082708-111085062:+|nuORF 3.944395688203298 0.708391353636983 4 {[TV]|[{I|L}S]}VT[EP]D{I|L}{I|L}{I|L} 10 -1 40.502 0.0 0.0 2.8734 0.0 0.0 0.0 325.96163843870085 325.96163843870085 28.512748184105057 0.0 0.0 0.0 0 1.0 0.958607314841775 0.25 0.0 {[TV]|[{I|L}S]}VT[EP]D{I|L}{I|L}{I|L} 2.8734 - 312 1 1.376 88217.2 0.5199999809265137 12673 5036 17698 HBL1_DMSO_200M_050219_2,17711 HBL1_DMSO_200M_050219_2,17711,KNCWWMNNSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17712 94.322 800.0 64052.0 25 0 3452.3 -1 0 82 1086.8603700455958 3257.559280736988 3 1087.524951159954 MULTI CID FTMS 0 0 0 17698 97211.84375 0.2567684252274947 6 -0.5739593505859375 14 4 2 -1 8.5835 0.0 0.0 0.26349 0.0 0.0 2501.2477032846946 568.1873873346311 3069.435090619326 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0.26349 - 165 + 1 1.376 40635.7 0.6100000143051147 12674 5036 17698 HBL1_DMSO_200M_050219_2,17712 HBL1_DMSO_200M_050219_2,17712, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17714 94.327 38.0 1622800.0 25 0 183660.0 + 38318 TQLDAVRYTGL 11 81 618.8336158286929 1235.6526787241858 2 618.8340331912041 MULTI CID FTMS 0 0 0 17713 1656468.0 0.9071869323126348 1 -0.12872314453125 1 Unmodified _TQLDAVRYTGL_ REV__ENSG00000136011|ENST00000388887|STAB2 22.65808497894818 0.560183898709508 4 [QT]{I|L} 3 -1 33.16 0.0 0.0 2.6836 0.0 0.0 0.0 890.4387559549076 890.4387559549076 8.709697598903148 0.0 0.0 0.0 0 0.7742275032520141 1.154901959985743 0.2614393726401688 0.2302046884880938 [QT]{I|L} 2.6836 + + 199 1 1.376 51438.7 1.0 12675 5037 17713 HBL1_DMSO_200M_050219_2,17714 HBL1_DMSO_200M_050219_2,17714,TQLDAVRYTGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17715 94.329 118.0 427840.0 25 0 39588.0 + 8069 ENWYAKVLSI 10 74 611.8262862524264 0 611.8260986208916 PEAK CID FTMS 0 0 0 17713 427597.84375 0.6070828314288693 2 -0.238006591796875 2 Unmodified _ENWYAKVLSI_ REV__ENSG00000120798|ENST00000333003|NR2C1;REV__ENST00000547594.5_1_12:95420624-95451409:-|nuORF;REV__nc|ENSG00000120798|P13056-2|NR2C1;REV__nc|ENSG00000120798|P13056-3|NR2C1 16.149105407346934 0.3281668441439271 4 {I|L} 1 -1 14.292 0.0 0.0 1.1699 0.0 0.0 893.4638995538777 212.0681093805297 1105.5320089344077 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 {I|L} 1.1699 + + 59 + 1 1.376 44385.9 1.0 12676 5037 17713 HBL1_DMSO_200M_050219_2,17715 HBL1_DMSO_200M_050219_2,17715,ENWYAKVLSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17716 94.337 447.0 325470.0 25 0 22864.0 + 17174 KLIQLQFEV 9 160 559.3351008642189 1116.6556487952378 2 559.3353759646416 MULTI CID FTMS 0 0 0 17713 210096.671875 0.8458340171644171 -1 0.0889053344726562 3 Unmodified _KLIQLQFEV_ ENST00000393179.8_1_12:89885842-89919131:-|nuORF 96.28474662873226 0.0124266067997264 4 [Q{I|L}]{I|L}K{I|L}Q{M(Oxidation (M))|F}EV 9 2 + 79.419 0.0 0.0 7.1122 7.1122 76.83 0.0 0.0 0.0 0.4660744849425384 16.478174818886366 0.4660744849425384 0.4660744849425384 0 0.8921590589602533 0.4202164033831898 0.0 2.1223637474483468 [Q{I|L}]{I|L}K{I|L}Q{M(Oxidation (M))|F}EV;[K{I|L}]{I|L}Q{I|L}Q{M(Oxidation (M))|F}EV;{I|L}{I|L}KQ{I|L}Q{M(Oxidation (M))|F}EV;[AG]{I|L}{I|L}K{I|L}Q{M(Oxidation (M))|F}EV;{I|L}{I|L}QK{I|L}Q{M(Oxidation (M))|F}EV;[Q{I|L}]{I|L}KQ{I|L}{M(Oxidation (M))|F}EV;[K{I|L}]{I|L}QQ{I|L}{M(Oxidation (M))|F}EV;{I|L}{I|L}KQQ{I|L}{M(Oxidation (M))|F}EV;[Q{I|L}]{I|L}K{I|L}[AG]{M(Oxidation (M))|F}EV;[AG]{I|L}{I|L}KQ{I|L}{M(Oxidation (M))|F}EV 7.1122;7.0705;7.0374;6.8388;6.6102;6.5553;6.5136;6.4806;6.2876;6.2819 -;+;-;-;-;-;-;-;-;- + 2276 1 1.376 113084.5 1.0 12677 5037 17713 HBL1_DMSO_200M_050219_2,17716 HBL1_DMSO_200M_050219_2,17716,KLIQLQFEV True True KLIQLQFEV 94.336987 559.335375964642 1977044.5 17713.0 ENST00000393179.8_1_12:89885842-89919131:-|nuORF 5.422574361165364 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17717 94.341 234.0 413280.0 25 0 44828.0 + 15424 HQIDLIVQL 9 122 539.3178698332674 1076.6211867333348 2 539.8168823122978 MULTI CID FTMS 0 0 0 17713 173566.765625 0.0608857238786054 -5 0.5473480224609375 4 Unmodified _IPPNIPSVQL_ nc|ENSG00000185324|Q15131-2|CDK10;ENSG00000185324|ENST00000353379|CDK10;ENST00000472018.5_1_16:89760470-89762097:+|nuORF;nc|ENSG00000185324|Q15131-3|CDK10;nc|ENSG00000185324|Q15131-4|CDK10;nc|ENSG00000185324|Q15131-7|CDK10;ENST00000505733.5_1_16:89758861-89762180:+|nuORF 21.74664581756881 0.480091245866545 4 [{I|L}A]GHD{I|L}{I|L}V 8 8 49.385 0.0 0.0 4.5871 0.0 0.0 0.0 255.13363231230807 255.13363231230807 27.74227503252014 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]GHD{I|L}{I|L}V 4.5871 - 1082 1 1.376 83370.3 1.0 12678 5037 17713 HBL1_DMSO_200M_050219_2,17717 HBL1_DMSO_200M_050219_2,17717,IPPNIPSVQL False False HQIDLIVQL 94.341379 539.816882312298 42322364.0 17713.0 nc|ENSG00000185324|Q15131-2|CDK10;;ENSG00000185324|ENST00000353379|CDK10;;ENST00000472018.5_1_16:89760470-89762097:+|nuORF;;nc|ENSG00000185324|Q15131-3|CDK10;;nc|ENSG00000185324|Q15131-4|CDK10;;nc|ENSG00000185324|Q15131-7|CDK10;;ENST00000505733.5_1_16:89758861-89762180:+|nuORF 5.290096759796143 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17718 94.347 329.0 327470.0 25 0 40404.0 + 6134 DSYPVVNLI 9 143 510.27462450926873 1018.5346960853376 2 510.2748290896416 MULTI CID FTMS 0 0 0 17713 180567.203125 0.2271197190046456 -2 0.1690521240234375 5 Unmodified _DSYPVVNLI_ ENSG00000188566|ENST00000684003|NDOR1;nc|ENSG00000188566|Q9UHB4-2|NDOR1;nc|ENSG00000188566|Q9UHB4-3|NDOR1;nc|ENSG00000188566|Q9UHB4-4|NDOR1 39.957323273325 0.0756908302845263 4 [VP]VN{I|L}{M(Oxidation (M))|F} 6 4 29.747 0.0 0.0 2.9206 0.0 0.0 0.0 346.1447784430125 346.1447784430125 5.233623702246373 0.0 0.0 0.0 0 0.2887254899964357 1.0969100130080565 0.0 0.0 [VP]VN{I|L}{M(Oxidation (M))|F} 2.9206 - 671 1 1.376 84651.9 1.0 12679 5037 17713 HBL1_DMSO_200M_050219_2,17718 HBL1_DMSO_200M_050219_2,17718,DSYPVVNLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17719 94.357 559.0 189970.0 25 0 34637.0 + 18743 LALLPSLR 8 80 441.7919264529168 881.5692999726336 2 441.7922546267509 MULTI CID FTMS 0 0 0 17713 171967.015625 0.6277883988370909 1 -0.12872314453125 6 Unmodified _LALLPSLR_ REV__CON__A2I7N0 37.97399986684836 0.2681860861828418 4 {I|L}A{I|L}{I|L}SP[R{I|L}] 8 -1 + 77.256 0.0 0.0 8.7634 8.7634 95.803 0.0 0.0 0.0 60.60016905927597 7.742275032520141 7.742275032520141 14.515902230823272 0 0.8807196863200843 1.6989700043360187 0.3054621874040891 0.4247425010840047 {I|L}A{I|L}{I|L}SP[R{I|L}];{I|L}A{I|L}PS{I|L}[R{I|L}];{I|L}A{I|L}{I|L}[EP]{[QV]|[N{I|L}]|[RA]|[KV]} 8.7634;7.1168;6.8122 -;-;- 149 + 1 1.376 87392.9 1.0 12680 5037 17713 HBL1_DMSO_200M_050219_2,17719 HBL1_DMSO_200M_050219_2,17719,LALLPSLR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17720 94.371 800.0 176150.0 25 0 13080.0 + 10556 FVFDRMFTNP 10 131 637.3052570819935 1272.595961230787 2 637.3060180544853 MULTI CID FTMS 0 0 0 17713 137522.140625 1.0 0 0.0 7 Unmodified _FVFDRMFTNP_ ENSG00000137200|ENST00000373451|CMTR1 81.9152076656658 0.0154982280583276 4 [{M(Oxidation (M))|F}V]PN{I|L}WWTNP 10 5 + 40.745 0.0 0.0 3.2017 3.2017 68.944 0.0 0.0 0.0 3.946336780881097 9.738992939876551 3.946336780881097 3.946336780881097 0 1.048455006504028 0.7958800173440752 0.5752574989159953 0.7887254899964358 [{M(Oxidation (M))|F}V]PN{I|L}WWTNP;[DP]T[WH]K{M(Oxidation (M))|F}V{M(Oxidation (M))|F}P;[DP]T[VP]K[YN]ENP;[{I|L}P]E[C(Carbamidomethyl (C))H]K{M(Oxidation (M))|F}V{M(Oxidation (M))|F}P;[DP]T[VP][C(Carbamidomethyl (C))Q]NV{M(Oxidation (M))|F}P;[{I|L}P]E[KC]WWTNP;{[QV]|[N{I|L}]|[RA]|[KV]}[{M(Oxidation (M))|F}V]YM{M(Oxidation (M))|F}ENP;[{I|L}P]E[{I|L}A]N[YN]ENP;[{I|L}P]E[Y{M(Oxidation (M))|F}][HK]ENP;[{I|L}P]E[C(Carbamidomethyl (C))H]KD{M(Oxidation (M))|F}VE 3.2017;2.8916;2.7027;2.5482;2.4291;2.263;2.2426;2.2208;2.1772;2.1144 -;-;-;-;-;-;-;-;-;- 1351 1 1.376 108432.3 0.5699999928474426 12681 5037 17713 HBL1_DMSO_200M_050219_2,17720 HBL1_DMSO_200M_050219_2,17720,FVFDRMFTNP True True FVFDRMFTNP 94.370974 637.306018054485 1358641.25 17713.0 ENSG00000137200|ENST00000373451|CMTR1 7.639694690704346 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17721 94.377 334.0 422120.0 25 0 38608.0 + + 27396 NLIPILKTV 9 148 506.3321222789767 1010.6496916247534 2 505.8346740603447 MULTI CID FTMS 0 0 0 17713 122997.59375 1.0 0 0.0 8 Unmodified _PIIRLTVSL_ ENSG00000105397|ENST00000525621|TYK2;ENST00000530220.1_1_19:10461512-10463916:-|nuORF 26.88365393820708 0.1891292719743517 4 [{I|L}P]{I|L}KE{I|L}VS{I|L} 9 -1 + 44.605 0.0 0.0 4.4135 4.4135 69.748 0.0 0.0 0.0 2.2493218338478727 2.2493218338478727 2.2493218338478727 2.2493218338478727 0 0.6549471895720985 1.0457574905606752 0.3494850021680094 0.0 [{I|L}P]{I|L}KE{I|L}VS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[{I|L}V]{I|L}VD{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[{I|L}V]V{I|L}D{I|L};[{I|L}P]{I|L}KT{I|L}VD{I|L};[{I|L}P]{I|L}KTV{I|L}D{I|L};{I|L}{I|L}PKE{I|L}VS{I|L};[{I|L}P]{I|L}KE{I|L}TVV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[{I|L}V]{I|L}EVV;[{I|L}P]{I|L}KT{I|L}EVV;{I|L}{I|L}PKT{I|L}VD{I|L} 4.4135;4.1909;4.095;3.8652;3.7693;3.5997;3.5912;3.4475;3.1218;3.0514 -;-;-;-;-;-;-;-;-;- 1389 1 1.376 110878.2 1.0 12682 5037 17713 HBL1_DMSO_200M_050219_2,17721 HBL1_DMSO_200M_050219_2,17721,PIIRLTVSL False False NLIPILKTV 94.37702 505.834674060345 857418.9375 17713.0 ENSG00000105397|ENST00000525621|TYK2;;ENST00000530220.1_1_19:10461512-10463916:-|nuORF 4.708463350931804 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17722 94.391 800.0 149290.0 25 0 17271.0 + 875 AEVDVNQKLLL 11 144 621.3575757175456 1240.7005985018911 2 621.3605834841728 MULTI CID FTMS 0 0 0 17713 112325.59375 0.0018788938227282 23 -1.9446792602539065 9 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 49.55428908609986 0.1200983873401432 4 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L} 12 -1 + 82.88 0.0 0.0 6.6801 6.6801 75.914 0.0 0.0 0.0 0.7352282311924085 3.4948500216800937 0.7352282311924085 0.7352282311924085 0 2.1549471895720984 1.5228787452803376 1.2491348669726232 0.0 {[DA]|[EG]}{I|L}DVA{I|L}{I|L}EG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}EG{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}E{I|L}G{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}E{I|L}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVA{I|L}{I|L}E[{I|L}A]V;{[DA]|[EG]}{I|L}DVA{I|L}E{I|L}[{I|L}A]V;{[DA]|[EG]}{I|L}DVA{I|L}{I|L}W{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}E[{I|L}A]V;{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}{I|L}W{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVA{I|L}E{I|L}[{I|L}A]V 6.6801;6.6209;6.5794;6.5361;6.3984;6.2977;6.083;6.077;6.0237;5.9923 -;-;-;-;-;-;-;-;-;- 18437 1 1.376 90599.1 0.5199999809265137 12683 5037 17713 HBL1_DMSO_200M_050219_2,17722 HBL1_DMSO_200M_050219_2,17722,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17723 94.399 464.0 172970.0 25 0 26884.0 + 42539 VTLVQNYL 8 113 475.2702409428125 948.525928952425 2 475.2708007693291 MULTI CID FTMS 0 0 0 17713 110129.984375 0.7317818902769297 2 -0.238006591796875 10 Unmodified _VTLVQNYL_ REV__ENST00000415298.5_1_2:224622313-224622367:-|nuORF 13.50788311687929 0.7113601687236069 4 {[TV]|[{I|L}S]}{I|L} 3 -1 24.978 0.0 0.0 2.6334 0.0 0.0 0.0 632.2996309869749 632.2996309869749 10.95506114590637 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}{I|L} 2.6334 + + 67 + 1 1.376 64222.6 1.0 12684 5037 17713 HBL1_DMSO_200M_050219_2,17723 HBL1_DMSO_200M_050219_2,17723,VTLVQNYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17724 94.403 100.0 679740.0 25 0 76166.0 -1 TIICILPSL 9 97 515.3057790567564 1028.5970051803126 2 515.3063842654228 MULTI CID FTMS 0 0 0 17713 103571.0625 1.0 0 0.0 11 Carbamidomethyl (C) _TIIC(Carbamidomethyl (C))ILPSL_ nc|ENSG00000089101|Q8NHU2-6|CFAP61 39.957323273325 0.0756908302845263 4 [{I|L}T]T[QA]NT{I|L} 8 -1 42.789 0.0 0.0 4.1599 0.0 0.0 0.0 183.10827162001888 183.10827162001888 18.836328065115907 0.0 0.0 0.0 0 0.4247425010840047 1.0969100130080565 0.8913577739914502 0.3252574989159953 [{I|L}T]T[QA]NT{I|L} 4.1599 - 1269 1 1.376 62244.2 1.0 12685 5037 17713 HBL1_DMSO_200M_050219_2,17724 HBL1_DMSO_200M_050219_2,17724,TIICILPSL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 17725 94.417 800.0 168760.0 25 0 12625.0 43876 YFPDYSIGNL 10 141 594.7813257044941 1187.548098475788 2 594.7802612185478 MULTI CID FTMS 0 0 0 17713 101669.765625 0.2774397767951327 -7 0.7832107543945312 12 Unmodified _YFPDYSIGNL_ ENSG00000164815|ENST00000297431|ORC5;ENST00000463152.5_1_7:103824789-103838202:-|nuORF;ENST00000485726.1_1_7:103828364-103848439:-|nuORF;nc|ENSG00000164815|O43913-2|ORC5 43.85829265575387 0.1168243637355526 4 {M(Oxidation (M))|F}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}D[C(Carbamidomethyl (C))R]S{I|L} 9 7 + 53.496 0.0 0.0 4.5048 4.5048 72.977 0.0 0.0 0.0 16.478174818886373 3.802112417116064 3.802112417116064 3.802112417116064 0 0.3252574989159953 0.0 0.2887254899964357 0.2742275032520141 {M(Oxidation (M))|F}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}D[C(Carbamidomethyl (C))R]S{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}D[C(Carbamidomethyl (C))R]TV;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}PD[C(Carbamidomethyl (C))R]S{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}PD[C(Carbamidomethyl (C))R]TV;{M(Oxidation (M))|F}{M(Oxidation (M))|F}M{I|L}D[C(Carbamidomethyl (C))R]S{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[HM]YS{I|L};{M(Oxidation (M))|F}{M(Oxidation (M))|F}M{I|L}D[C(Carbamidomethyl (C))R]TV;{M(Oxidation (M))|F}{M(Oxidation (M))|F}P{M(Oxidation (M))|F}[HM]YTV;{M(Oxidation (M))|F}{M(Oxidation (M))|F}PTT[YE]GN{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{[QS]|[NT]}{M(Oxidation (M))|F}P[Y{I|L}] 4.5048;4.1846;4.1137;3.7936;3.7012;3.5134;3.3811;3.1932;3.1849;3.0317 -;-;-;-;-;-;-;-;-;- 1449 + 1 1.376 103926.0 0.4900000095367431 12686 5037 17713 HBL1_DMSO_200M_050219_2,17725 HBL1_DMSO_200M_050219_2,17725,YFPDYSIGNL True True FFPFDTRQM 94.416538 594.780261218548 4385396.5 17713.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12 2.4514170487721763 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17726 94.43 800.0 167500.0 25 0 6966.2 42304 VSTPVLEVK 9 105 971.576881651062 970.569605184462 1 973.5829955935478 MULTI CID FTMS 0 0 0 17713 95404.890625 0.0651026948336255 4 -0.4246902465820312 13 Unmodified _VSTPVLEVK_ ENSG00000164483|ENST00000439090|SAMD3;nc|ENSG00000164483|Q8N6K7-3|SAMD3 26.88365393820708 0.1891292719743517 4 {[QV]|[N{I|L}]|[RA]|[KV]}EPVSMA 8 6 25.364 0.0 0.0 2.6133 0.0 0.0 0.0 126.14622724372272 126.14622724372272 -0.3645030198051309 0.0 -0.3645030198051309 0.0 0 0.0 0.9208187539523752 1.5 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}EPVSMA 2.6133 - 4517 1 1.376 89801.6 0.4900000095367431 12687 5037 17713 HBL1_DMSO_200M_050219_2,17726 HBL1_DMSO_200M_050219_2,17726,VSTPVLEVK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17727 94.444 800.0 189440.0 25 0 9162.1 -1 0 144 992.4788440006804 1982.9431350681607 2 992.9727661013604 MULTI CID FTMS 0 0 0 -1 0 14 4 [{I|L}V]C(Carbamidomethyl (C)){I|L}SK 6 -1 30.328 0.0 0.0 1.5294 0.0 0.0 0.0 1279.5209467543702 1279.5209467543702 14.10777778612239 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5 0.0 [{I|L}V]C(Carbamidomethyl (C)){I|L}SK 1.5294 - 3693 1 1.376 101373.5 0.4900000095367431 12688 5037 17713 HBL1_DMSO_200M_050219_2,17727 HBL1_DMSO_200M_050219_2,17727, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17728 94.451 274.0 379450.0 25 0 43590.0 + 13350 HLFDAFVSV 9 100 517.7688476856829 1033.5231424381657 2 517.7675659060478 MULTI CID FTMS 0 0 0 17713 91343.5390625 0.2723627781812964 -2 0.1690521240234375 15 Unmodified _HLFDAFVSV_ ENSG00000035499|ENST00000265036|DEPDC1B;ENST00000512078.5_1_5:59893582-59984814:-|nuORF;nc|ENSG00000035499|Q8WUY9-2|DEPDC1B 109.62928328672726 0.0058899017516516 4 [H{I|L}]{M(Oxidation (M))|F}DA{M(Oxidation (M))|F}VSV 9 0 + 89.99 0.0 0.0 8.7071 8.7071 91.446 0.0 0.0 0.0 8.57840941039747 16.478174818886373 8.57840941039747 8.57840941039747 0 1.2614393726401687 1.3979400086720375 1.4802046884880935 0.0 + + [H{I|L}]{M(Oxidation (M))|F}DA{M(Oxidation (M))|F}VSV;[VS]{M(Oxidation (M))|F}H{I|L}{M(Oxidation (M))|F}VSV;[H{I|L}]{M(Oxidation (M))|F}DAV{M(Oxidation (M))|F}SV;[VS]{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L}VSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HDA{M(Oxidation (M))|F}VSV;[VS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}H{I|L}VSV;[VS]{M(Oxidation (M))|F}H{I|L}V{M(Oxidation (M))|F}SV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HDAV{M(Oxidation (M))|F}SV;[H{I|L}]DDH{I|L}VSV;[VS]{M(Oxidation (M))|F}H{M(Oxidation (M))|F}V{I|L}SV 8.7071;7.877;7.5389;7.2711;7.2062;6.9798;6.7089;6.0381;5.9185;5.8883 +;-;-;-;-;-;-;-;-;- + 1070 1 1.376 86348.5 1.0 12689 5037 17713 HBL1_DMSO_200M_050219_2,17728 HBL1_DMSO_200M_050219_2,17728,HLFDAFVSV True True HLFDAFVSV 94.450507 517.767565906048 2961977.75 17713.0 nc|ENSG00000035499|Q8WUY9-2|DEPDC1B;;ENST00000512078.5_1_5:59893582-59984814:-|nuORF;;ENSG00000035499|ENST00000265036|DEPDC1B 7.818226337432861 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17730 94.455 32.0 2231000.0 25 0 405930.0 + 13282 HIPDVITYL 9 71 535.7982331066675 1069.5819132801348 2 535.7979614138603 MULTI CID FTMS 0 0 0 17729 1485607.25 0.6435497512949665 2 -0.2050704956054687 1 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 36.04419817259434 0.0971720506436186 4 [H{I|L}][DP]V{I|L}TY{I|L} 9 0 + 45.581 0.0 0.0 4.2616 4.2616 72.7 0.0 0.0 0.0 4.259687322722812 8.384767769392738 4.259687322722812 4.259687322722812 0 0.6989700043360187 1.5228787452803376 0.5 0.0 + + [H{I|L}][DP]V{I|L}TY{I|L};[VP]D{I|L}H{I|L}TY{I|L};[DP]V{I|L}H{I|L}TY{I|L};[VP]D{I|L}T[H{I|L}]Y{I|L};[DP][H{I|L}]V{I|L}TY{I|L};[DP]V{I|L}T[H{I|L}]Y{I|L};[YT][R{I|L}]{[QN]|[E{I|L}]|[KN]}Y{I|L};[VP]S{I|L}E[H{I|L}]Y{I|L};[H{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[H{I|L}]Y{I|L};[VP]S{I|L}H{[QN]|[E{I|L}]|[KN]}Y{I|L} 4.2616;3.8633;3.6559;2.2056;2.1843;1.9982;1.6954;1.5259;1.5094;1.2659 +;-;-;-;-;-;-;-;-;- + 190 1 1.376 61017.9 1.0 12690 5038 17729 HBL1_DMSO_200M_050219_2,17730 HBL1_DMSO_200M_050219_2,17730,HIPDVITYL True True HIPDVITYL 94.455296 535.79796141386 374100912.0 17729.0 nc|ENSG00000079459|P37268-4|FDFT1;;nc|ENSG00000079459|P37268-3|FDFT1;;nc|ENSG00000079459|P37268-5|FDFT1;;ENSG00000079459|ENST00000220584|FDFT1;;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;;nc|ENSG00000079459|P37268-2|FDFT1 6.009774367014567 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17731 94.457 48.0 923310.0 25 0 113600.0 + 30129 QVLEDFPTI 9 73 531.2795055907297 1060.5444582482594 2 531.2797119021416 MULTI CID FTMS 0 0 0 17729 856054.1875 0.3885281999268605 2 -0.2050704956054687 2 Unmodified _QVLEDFPTI_ ENSG00000079459|ENST00000220584|FDFT1;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1 74.92900055777586 0.0191935851694334 4 [TP]{I|L}{[SA]|[TG]}D{M(Oxidation (M))|F} 7 7 44.926 0.0 0.0 4.2361 0.0 0.0 0.0 326.1696773246844 326.1696773246844 21.69424766394343 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 1.6989700043360187 0.0 [TP]{I|L}{[SA]|[TG]}D{M(Oxidation (M))|F} 4.2361 - 194 1 1.376 44562.6 1.0 12691 5038 17729 HBL1_DMSO_200M_050219_2,17731 HBL1_DMSO_200M_050219_2,17731,QVLEDFPTI True True QVLEDFPTI 94.456588 531.279711902142 36538220.0 17729.0 nc|ENSG00000079459|P37268-2|FDFT1;;ENSG00000079459|ENST00000220584|FDFT1;;nc|ENSG00000079459|P37268-4|FDFT1;;nc|ENSG00000079459|P37268-3|FDFT1 6.9130527178446455 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17732 94.458 62.0 976700.0 25 0 151480.0 + 17402 KMPDDVWLV 9 71 551.7839305287782 1101.5533081243564 2 551.7839843630791 MULTI CID FTMS 0 0 0 17729 912489.625 0.8673861934787501 1 -0.109283447265625 3 Unmodified _KMPDDVWLV_ ENSG00000110514|ENST00000706887|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6|MADD 49.93300154707207 0.0405168250806675 4 VWMK{I|L}V 6 7 54.201 0.0 0.0 4.9204 0.0 0.0 327.10630995918126 0.0 327.10630995918126 0.0 42.19396287239803 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.4247425010840047 VWMK{I|L}V 4.9204 - 388 1 1.376 55162.2 1.0 12692 5038 17729 HBL1_DMSO_200M_050219_2,17732 HBL1_DMSO_200M_050219_2,17732,KMPDDVWLV True True KMPDDVWLV 94.458128 551.783984363079 21953592.0 17729.0 ENSG00000110514|ENST00000706887|MADD;;nc|ENSG00000110514|Q8WXG6-8|MADD;;nc|ENSG00000110514|Q8WXG6-4|MADD;;nc|ENSG00000110514|Q8WXG6-5|MADD;;nc|ENSG00000110514|Q8WXG6-6|MADD;;nc|ENSG00000110514|Q8WXG6-7|MADD;;nc|ENSG00000110514|Q8WXG6-3|MADD;;nc|ENSG00000110514|Q8WXG6-2|MADD;;nc|ENSG00000110514|Q8WXG6|MADD 5.847725868225098 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17733 94.46 61.0 1272900.0 25 0 129340.0 + 10396 FSWEGAFQHV 10 92 604.2805177427076 1206.5464825522151 2 604.2806884646416 MULTI CID FTMS 0 0 0 17729 732752.6875 0.1742807896418962 -2 0.2176284790039062 4 Unmodified _FSWEGAFQHV_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000434365.1_1_X:114938170-114938437:+|nuORF;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 57.72198328787511 0.0425618229276495 4 {M(Oxidation (M))|F}SWEGA{M(Oxidation (M))|F}Q[HV] 10 0 + 83.677 0.0 0.0 6.9353 6.9353 86.016 0.0 0.0 0.0 55.18736836693385 7.269987279362624 7.269987279362624 6.53212513775344 0 0.3494850021680094 0.0 0.8494850021680094 1.2302046884880935 + + {M(Oxidation (M))|F}SWEGA{M(Oxidation (M))|F}Q[HV];{M(Oxidation (M))|F}SWEQ{M(Oxidation (M))|F}Q[HV];{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KQ]AGE[VS]SE;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KQ]AWWSE;{M(Oxidation (M))|F}SWEGA{M(Oxidation (M))|F}[HN]{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KQ]QE[VS]SE;{M(Oxidation (M))|F}SWEQ{M(Oxidation (M))|F}[HN]{I|L};{M(Oxidation (M))|F}S{[DA]|[EG]}WA{M(Oxidation (M))|F}Q[HV];{M(Oxidation (M))|F}S[VS]WA{M(Oxidation (M))|F}Q[HV];[WE][{I|L}T]AGE[VS]SE 6.9353;6.3939;6.1105;6.039;5.8949;5.5655;5.3535;5.2787;5.2787;5.1963 +;-;-;-;-;-;-;-;-;- + 773 + 1 1.376 61739.3 1.0 12693 5038 17729 HBL1_DMSO_200M_050219_2,17733 HBL1_DMSO_200M_050219_2,17733,FSWEGAFQHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17734 94.462 106.0 733340.0 25 0 228110.0 + 33553 SILQSLVPA 9 85 464.27923834065695 926.543923748114 2 464.2792846560478 MULTI CID FTMS 0 0 0 17729 604957.9375 0.3135175493609077 4 -0.3563308715820312 5 Unmodified _SILQSLVPA_ ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 39.957323273325 0.0756908302845263 4 {[TV]|[{I|L}S]}Q{I|L}S 5 5 44.526 0.0 0.0 4.8056 0.0 0.0 0.0 395.2284079612577 395.2284079612577 11.161195827144397 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.3807196863200843 0.2302046884880938 {[TV]|[{I|L}S]}Q{I|L}S 4.8056 - 614 1 1.376 67577.7 1.0 12694 5038 17729 HBL1_DMSO_200M_050219_2,17734 HBL1_DMSO_200M_050219_2,17734,SILQSLVPA True True SILQSLVPA 94.461888 464.279284656048 71430960.0 17729.0 ENST00000597227.5_1_19:50432514-50434160:+|nuORF;;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;;ENST00000423777.6_1_19:50432412-50434160:+|nuORF 5.427954355875651 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17735 94.464 86.0 1277900.0 25 0 183800.0 + 35805 SVITQVFHV 9 118 515.2888164174124 1028.5630799016246 2 515.2874633669853 MULTI CID FTMS 0 0 0 17729 459926.0 0.2755151614628854 -2 0.2176284790039062 6 Unmodified _SVITQVFHV_ ENSG00000115677|ENST00000310931|HDLBP;nc|ENSG00000115677|Q00341-2|HDLBP 54.773552608820026 0.0299037012502309 4 [VS]{I|L}TQV{M(Oxidation (M))|F}[HV] 9 0 + 78.676 0.0 0.0 7.6491 7.6491 92.079 0.0 0.0 0.0 38.38910762555216 7.147642715192504 7.147642715192504 9.408482270997794 0 0.75 2.0 0.7302046884880937 0.5 + + [VS]{I|L}TQV{M(Oxidation (M))|F}[HV];[VS]{I|L}T{[CP]|[EA]}{I|L}PS{I|L};[VS]{I|L}T[AG]V{M(Oxidation (M))|F}[HV];[VS]{I|L}[WD]{I|L}PS{I|L};[VS]{I|L}T{[CP]|[EA]}{I|L}T[VP];[VS][WK]QT{I|L}[PA];[VS]{I|L}E[KA]{M(Oxidation (M))|F}[HV];[VS]{I|L}[WD]{I|L}T[VP];[VS]E{[RE]|[WV]}{I|L}PS{I|L};[VS][WK][AG]T{I|L}[PA] 7.6491;6.7344;6.2678;6.0758;5.8745;5.7294;5.4615;5.2159;5.1699;4.8342 +;-;-;-;-;-;-;-;-;- + 2321 + 1 1.376 88517.0 1.0 12695 5038 17729 HBL1_DMSO_200M_050219_2,17735 HBL1_DMSO_200M_050219_2,17735,SVITQVFHV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17736 94.466 103.0 518910.0 25 0 34944.0 + 45692 YWPTYTPMEV 10 80 643.7911322488482 1285.5677115644962 2 643.7918578982353 MULTI CID FTMS 0 0 0 17729 395915.53125 0.7504839023821575 1 -0.109283447265625 7 Unmodified _YWPTYTPMEV_ ENSG00000139842|ENST00000375440|CUL4A;nc|ENSG00000139842|Q13619-2|CUL4A 37.97399986684836 0.1789611706409123 4 DTPMEV 6 5 30.38 0.0 0.0 2.3632 0.0 0.0 595.2608400818775 0.0 595.2608400818775 0.0 7.936044015200448 0.0 0.0 0 0.5 0.0 1.0 0.0 DTPMEV 2.3632 - 600 + 1 1.376 45805.5 1.0 12696 5038 17729 HBL1_DMSO_200M_050219_2,17736 HBL1_DMSO_200M_050219_2,17736,YWPTYTPMEV False True YWPTYTPMEV 94.466042 643.791857898235 13617751.0 17729.0 nc|ENSG00000139842|Q13619-2|CUL4A;;ENSG00000139842|ENST00000375440|CUL4A 7.35532283782959 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17737 94.469 133.0 510600.0 25 0 68364.0 + 18273 KVIEINPYLL 10 75 601.3636736993155 1200.712794465431 2 601.3641235232353 MULTI CID FTMS 0 0 0 17729 355404.0625 0.4879693134792001 -1 0.12872314453125 8 Unmodified _KVIEINPYLL_ ENSG00000100804|ENST00000361611|PSMB5;ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000100804|P28074-2|PSMB5;nc|ENSG00000204264|P28062-2|PSMB8 53.40400417844725 0.0601721406801337 4 E{I|L}NPY{I|L}{I|L} 7 3 74.571 0.0 0.0 6.2105 0.0 0.0 340.24693495918126 0.0 340.24693495918126 0.0 39.081079205375744 0.0 0.0 0 1.1989700043360187 0.0 0.6747425010840047 0.7742275032520141 + E{I|L}NPY{I|L}{I|L} 6.2105 + + 193 1 1.376 54204.8 1.0 12697 5038 17729 HBL1_DMSO_200M_050219_2,17737 HBL1_DMSO_200M_050219_2,17737,KVIEINPYLL True True KVIEINPYLL 94.468748 601.364123523235 13284792.0 17729.0 nc|ENSG00000100804|P28074-2|PSMB5;;ENSG00000100804|ENST00000361611|PSMB5;;ENSG00000204264|ENST00000374882|PSMB8;;nc|ENSG00000204264|P28062-2|PSMB8 6.316178957621257 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17738 94.473 199.0 490350.0 25 0 81633.0 + 4674 DAYVLPKLYV 10 104 590.8342673449122 1179.6539817566245 2 590.8339111208916 MULTI CID FTMS 0 0 0 17729 272903.15625 0.0078112924694401 6 -0.4939804077148437 9 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 38.17557092003332 0.1768326257063233 4 {[DA]|[EG]}YV 4 6 35.662 0.0 0.0 3.0231 0.0 0.0 0.0 728.4355023481107 728.4355023481107 -1.4536501951208436 0.0 -1.4536501951208436 0.0 0 1.0 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}YV 3.0231 + + 554 1 1.376 79781.7 1.0 12698 5038 17729 HBL1_DMSO_200M_050219_2,17738 HBL1_DMSO_200M_050219_2,17738,DAYVLPKLYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17739 94.476 202.0 337170.0 25 0 50296.0 + 35827 SVLDDKLVFV 10 95 567.8248234077364 0 567.8248168826103 PEAK CID FTMS 0 0 0 17729 258498.046875 0.7111927382133229 1 -0.109283447265625 10 Unmodified _SVLDDKLVFV_ ENSG00000177119|ENST00000320560|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF;nc|ENSG00000177119|Q4KMQ2-2|ANO6;nc|ENSG00000177119|Q4KMQ2-3|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6 43.9818466556824 0.0820936144366115 4 VSV{I|L}GD{I|L} 7 6 43.805 0.0 0.0 3.8641 0.0 0.0 264.1500157978573 183.07785974674064 447.227875544598 0.0 0.0 0.0 0.0 0 1.6549471895720984 0.0 1.1549471895720984 0.0 VSV{I|L}GD{I|L} 3.8641 - 549 + 1 1.376 57995.0 1.0 12699 5038 17729 HBL1_DMSO_200M_050219_2,17739 HBL1_DMSO_200M_050219_2,17739,SVLDDKLVFV True True SVLDDKLVFV 94.476423 567.82481688261 6658937.0 17729.0 ENSG00000177119|ENST00000320560|ANO6;;nc|ENSG00000177119|Q4KMQ2-3|ANO6;;ENST00000426898.2_1_12:45610123-45776982:+|nuORF;;nc|ENSG00000177119|Q4KMQ2-2|ANO6;;nc|ENSG00000177119|Q4KMQ2-4|ANO6 6.44348669052124 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17740 94.479 112.0 673680.0 25 0 73655.0 + 12144 GQLEFRALL 9 114 523.8028760683 1045.5911992033998 2 523.7993652224541 MULTI CID FTMS 0 0 0 17729 232049.921875 0.1661797265141257 -3 0.2977752685546875 11 Unmodified _GQLEFRALL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000224411|Q14568|HSP90AA2P 24.020572477871973 0.2255576514309169 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C 4 6 27.932 0.0 0.0 2.6714 0.0 0.0 0.0 599.3526182309967 599.3526182309967 -4.436974992327123 0.0 -4.436974992327123 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C 2.6714 - 1320 1 1.376 63379.9 1.0 12700 5038 17729 HBL1_DMSO_200M_050219_2,17740 HBL1_DMSO_200M_050219_2,17740,GQLEFRALL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17741 94.483 214.0 519820.0 25 0 93707.0 + 13872 HVLDTLIQL 9 108 526.3102568044334 1050.605960675667 2 526.3113891482353 MULTI CID FTMS 0 0 0 17729 205163.78125 0.2945403862630868 -2 0.2176284790039062 12 Unmodified _HVLDTLIQL_ ENSG00000086758|ENST00000262854|HUWE1;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 70.71552829651908 0.0208223590022201 4 [HV]{I|L}DT{I|L}{I|L}Q{I|L} 9 0 + 67.413 0.0 0.0 6.4166 6.4166 84.593 0.0 0.0 0.0 7.075701760979371 9.889917747712644 7.075701760979371 7.075701760979371 0 0.6549471895720985 1.3010299956639813 1.1989700043360187 0.0 + + [HV]{I|L}DT{I|L}{I|L}Q{I|L};[H{I|L}]VDT{I|L}{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}S{I|L}HV{I|L}Q{I|L};[HV]{I|L}{[ET]|[MV]}V{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}S[HV]{I|L}{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}S{I|L}VH{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}S{I|L}H{I|L}VQ{I|L};[H{I|L}]V{[ET]|[MV]}V{I|L}Q{I|L};[{I|L}T]D{I|L}HV{I|L}Q{I|L};[HV]{I|L}{[ET]|[MV]}{I|L}VQ{I|L} 6.4166;5.7431;4.9972;4.3695;4.3343;4.2821;3.9276;3.6961;3.4638;3.3 +;-;-;-;-;-;-;-;-;- + 441 1 1.376 91413.9 1.0 12701 5038 17729 HBL1_DMSO_200M_050219_2,17741 HBL1_DMSO_200M_050219_2,17741,HVLDTLIQL True True HVLDTLIQL 94.482859 526.311389148235 6067816.5 17729.0 ENSG00000086758|ENST00000262854|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 5.732431570688884 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17742 94.486 160.0 560430.0 25 0 70352.0 + 5731 DPLVPPQLTI 10 110 546.8190938530392 1091.6236347728784 2 546.8180419802666 MULTI CID FTMS 0 0 0 17729 168399.578125 0.4675851476439725 -1 0.12872314453125 13 Unmodified _DPLVPPQLTI_ ENSG00000023228|ENST00000233190|NDUFS1;nc|ENSG00000023228|P28331-2|NDUFS1;nc|ENSG00000023228|P28331-3|NDUFS1;nc|ENSG00000023228|P28331-4|NDUFS1;nc|ENSG00000023228|P28331-5|NDUFS1 55.50274090549119 0.048383292844968 4 [DP]{I|L}VPPQ{I|L}T{I|L} 10 0 + 46.376 0.0 0.0 4.2483 4.2483 67.0 0.0 0.0 0.0 1.2370318959599302 10.452490459521968 1.2370318959599302 1.2370318959599302 0 1.3182503180159344 1.0969100130080565 0.3252574989159953 0.0 + + [DP]{I|L}VPPQ{I|L}T{I|L};[{I|L}P]DVPPQ{I|L}T{I|L};[VP]EVPPQ{I|L}T{I|L};[DP]{I|L}VPP[AG]{I|L}T{I|L};[{I|L}P]DVPP[AG]{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}PVPPQ{I|L}T{I|L};[{I|L}P]VDPPQ{I|L}T{I|L};[{I|L}P]QPTQPRR;[QP]P{I|L}TQPRR;[VP]EVPP[AG]{I|L}T{I|L} 4.2483;4.135;3.5709;3.4088;3.2955;3.177;3.0629;3.0315;2.9182;2.7314 +;-;-;-;-;-;-;-;-;- + 833 1 1.376 76275.6 1.0 12702 5038 17729 HBL1_DMSO_200M_050219_2,17742 HBL1_DMSO_200M_050219_2,17742,DPLVPPQLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17743 94.491 268.0 288560.0 25 0 57454.0 + 4935 DGLTVHLVI 9 106 483.7847146685895 965.5548764039788 2 483.7845641970634 MULTI CID FTMS 0 0 0 17729 162020.828125 0.0736750414454094 4 -0.3563308715820312 14 Unmodified _DGLTVHLVI_ ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000160803|ENST00000368309|UBQLN4;ENSG00000175520|ENST00000311659|UBQLN3;ENSG00000188021|ENST00000338222|UBQLN2;ENST00000472638.1_1_1:156020124-156021603:-|nuORF;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-4|UBQLN1;nc|ENSG00000160803|Q9NRR5-2|UBQLN4 60.38955033654506 0.025866396858536 4 [H{I|L}]S{I|L}VW 6 6 46.515 0.0 0.0 4.8175 0.0 0.0 0.0 227.1388967499352 227.1388967499352 24.12717386638313 0.0 0.0 0.0 0 0.2742275032520141 1.3010299956639813 0.6861818737241735 0.0 [H{I|L}]S{I|L}VW 4.8175 - 863 1 1.376 62802.3 1.0 12703 5038 17729 HBL1_DMSO_200M_050219_2,17743 HBL1_DMSO_200M_050219_2,17743,DGLTVHLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17744 94.5 520.0 259260.0 25 0 37724.0 + 42207 VSFPKLAAQ 9 105 480.7793613247879 959.5441697163758 2 480.7794372439384 MULTI CID FTMS 0 0 0 17729 159985.65625 0.8486699138937234 -1 0.12872314453125 15 Unmodified _VSFPKLAAQ_ REV__ENSG00000110619|ENST00000380525|CARS1;REV__ENST00000439280.6_1_11:3050478-3078655:-|nuORF;REV__ENST00000526890.5_1_11:3050224-3063461:-|nuORF;REV__ENST00000531387.5_1_11:3022346-3069017:-|nuORF;REV__nc|ENSG00000110619|P49589-2|CARS1;REV__nc|ENSG00000110619|P49589|CARS1 25.399314129420983 0.2080152500878129 4 [VS]{M(Oxidation (M))|F}E{I|L}[RP]{I|L} 8 -1 + 55.961 0.0 0.0 5.832 5.832 78.071 0.0 0.0 0.0 34.502414651106506 7.7815125038364386 7.7815125038364386 3.534087492996392 0 0.7302046884880937 2.0 0.0 0.3252574989159953 [VS]{M(Oxidation (M))|F}E{I|L}[RP]{I|L};[VS]{M(Oxidation (M))|F}{I|L}E[RP]{I|L};[VS]{I|L}{M(Oxidation (M))|F}E[RP]{I|L};[VS]{M(Oxidation (M))|F}{I|L}[W{I|L}][VP];[VS]{I|L}{M(Oxidation (M))|F}[W{I|L}][VP] 5.832;5.4637;4.6216;2.9229;1.9772 -;-;-;-;- 301 + 1 1.376 104487.2 1.0 12704 5038 17729 HBL1_DMSO_200M_050219_2,17744 HBL1_DMSO_200M_050219_2,17744,VSFPKLAAQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17745 94.505 268.0 323590.0 25 0 25621.0 17182 KLLAAILHL 9 124 496.3367821865241 990.6590114398482 2 496.3368102908134 MULTI CID FTMS 0 0 0 17729 113748.2109375 1.0 0 0.0 16 Unmodified _KLLAAILHL_ ENSG00000137474|ENST00000409709|MYO7A;ENSG00000169994|ENST00000409816|MYO7B;nc|ENSG00000137474|Q13402-2|MYO7A;nc|ENSG00000137474|Q13402-3|MYO7A;nc|ENSG00000137474|Q13402-4|MYO7A;nc|ENSG00000137474|Q13402-6|MYO7A;nc|ENSG00000137474|Q13402-7|MYO7A;nc|ENSG00000137474|Q13402-8|MYO7A;nc|ENSG00000169994|Q6PIF6-2|MYO7B;nc|ENSG00000169994|Q6PIF6|MYO7B 46.92087301778293 0.0471210510596396 4 K{I|L}{I|L}A[{I|L}A]{I|L}H{I|L} 9 0 + 60.178 0.0 0.0 6.0746 6.0746 80.329 0.0 0.0 0.0 22.453180212453105 4.436974992327123 4.436974992327123 4.436974992327123 0 1.3494850021680094 0.638272163982407 0.0 0.0 + + K{I|L}{I|L}A[{I|L}A]{I|L}H{I|L};K{I|L}{I|L}A[{I|L}A]{I|L}{I|L}H;K{I|L}{I|L}A[{I|L}A]H{I|L}{I|L};{I|L}{I|L}AA{I|L}K{I|L}H{I|L} 6.0746;5.6267;4.5973;2.2718 +;-;-;- + 406 + 1 1.376 71641.0 1.0 12705 5038 17729 HBL1_DMSO_200M_050219_2,17745 HBL1_DMSO_200M_050219_2,17745,KLLAAILHL True True KILAAILHL 94.505065 496.336810290813 1492225.5 17729.0 ENSG00000176658|ENST00000318217|MYO1D;;nc|ENSG00000128833|Q9NQX4-2|MYO5C;;ENST00000560809.5_1_15:52548900-52557395:-|nuORF;;ENSG00000128833|ENST00000261839|MYO5C;;ENST00000558902.5_1_15:52548900-52571163:-|nuORF 3.520563999811808 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17746 94.519 800.0 276150.0 25 0 19123.0 + 31107 RLLLVGIDEV 10 168 563.8451569047178 1125.6757608762357 2 563.8450195193291 MULTI CID FTMS 0 0 0 17729 108594.46875 0.7789849411438741 -1 0.12872314453125 17 Unmodified _RLLLVGIDEV_ ENSG00000134262|ENST00000369569|AP4B1;ENST00000462591.1_1_1:114438325-114438970:-|nuORF;ENST00000479285.5_1_1:114438325-114438811:-|nuORF 63.960520009940105 0.0261970246776379 4 {I|L}VG{I|L}DEV 7 3 58.402 0.0 0.0 5.1882 0.0 0.0 382.27000624824376 0.0 382.27000624824376 0.0 37.09843199727089 0.0 0.0 0 1.2440840204505517 0.0 0.0 0.0 + {I|L}VG{I|L}DEV 5.1882 + + 454 1 1.376 170092.9 0.4900000095367431 12706 5038 17729 HBL1_DMSO_200M_050219_2,17746 HBL1_DMSO_200M_050219_2,17746,RLLLVGIDEV True True RLLLVGIDEV 94.518903 563.845019519329 1199203.25 17729.0 ENST00000462591.1_1_1:114438325-114438970:-|nuORF;;ENSG00000134262|ENST00000369569|AP4B1;;ENST00000479285.5_1_1:114438325-114438811:-|nuORF 5.616875966389974 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17747 94.531 675.0 232710.0 25 0 13285.0 + 41868 VPYPLPKIDL 10 156 577.8449842809443 1153.6754156286886 2 577.8444702029228 MULTI CID FTMS 0 0 0 17729 109124.265625 0.9332723797957732 1 -0.109283447265625 18 Unmodified _VPYPLPKIDL_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1 38.61474834105838 0.1721950110283317 4 VPYP{I|L}P[K{I|L}]D{I|L} 10 0 + 62.865 0.0 0.0 5.4491 5.4491 72.673 0.0 0.0 0.0 24.33736337143619 0.5982699280653989 0.5982699280653989 1.6334835803019132 0 1.089136830878453 1.5228787452803376 0.555462187404089 0.0 + + VPYP{I|L}P[K{I|L}]D{I|L};VPY{I|L}PP[K{I|L}]D{I|L};VPYP{I|L}P[K{I|L}]EV;VPY{I|L}PP[K{I|L}]EV 5.4491;5.3075;5.0086;4.867 +;-;-;- + 1196 + 1 1.376 125484.2 1.0 12707 5038 17729 HBL1_DMSO_200M_050219_2,17747 HBL1_DMSO_200M_050219_2,17747,VPYPLPKIDL False True VPYPLPKIDL 94.530648 577.844470202923 2691609.25 17729.0 nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;;nc|ENSG00000141279|P55786-2|NPEPPS;;nc|ENSG00000274487|A6NEC2|NPEPPSL1;;ENSG00000141279|ENST00000322157|NPEPPS;;ENST00000602788.5_1_17:45660176-45669919:+|nuORF 5.323013146718343 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17748 94.546 800.0 279410.0 25 0 40575.0 + 37553 TLIDLPGITKV 11 168 585.3614601793115 1168.708367425423 2 585.3610107302666 MULTI CID FTMS 0 0 0 17729 106587.7578125 0.3401172388506123 -2 0.2176284790039062 19 Unmodified _TLIDLPGITKV_ ENSG00000079805|ENST00000389253|DNM2;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000079805|P50570-3|DNM2;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000197959|Q9UQ16-2|DNM3;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16|DNM3 68.75988807550267 0.0359983986270074 4 [{I|L}T]{I|L}D{I|L}PG{I|L}KS{I|L} 11 3 + 95.792 0.0 0.0 8.1964 8.1964 84.969 0.0 0.0 0.0 27.367585652254192 3.409488038722529 3.409488038722529 3.409488038722529 0 1.579689690656103 2.0 1.850576203518622 0.0 [{I|L}T]{I|L}D{I|L}PG{I|L}KS{I|L};[{I|L}T]{I|L}D{I|L}PG{I|L}TKV;[{I|L}T]{I|L}D{I|L}PG{I|L}KTV;[{I|L}T]{I|L}D{I|L}V[PA]KS{I|L};[{I|L}T]{I|L}VEPG{I|L}KS{I|L};[{I|L}T]{I|L}D{I|L}PG{I|L}V[KT];[{I|L}T]{I|L}D{I|L}V[PA]TKV;[{I|L}T]{I|L}D{I|L}V[PA]KTV;[{I|L}T]{I|L}VEPG{I|L}TKV;[{I|L}T]{I|L}VEPG{I|L}KTV 8.1964;7.9047;7.8063;7.3866;7.1853;7.1633;7.0949;6.9965;6.8935;6.7952 -;+;-;-;-;-;-;-;-;- + 5320 + 1 1.376 165222.3 0.4900000095367431 12708 5038 17729 HBL1_DMSO_200M_050219_2,17748 HBL1_DMSO_200M_050219_2,17748,TLIDLPGITKV True True TLIDLPGITKV 94.545946 585.361010730267 5739991.0 17729.0 nc|ENSG00000079805|P50570-2|DNM2;;nc|ENSG00000079805|P50570-5|DNM2;;ENSG00000079805|ENST00000389253|DNM2;;nc|ENSG00000197959|Q9UQ16-5|DNM3;;nc|ENSG00000079805|P50570|DNM2;;ENSG00000197959|ENST00000627582|DNM3;;nc|ENSG00000197959|Q9UQ16-2|DNM3;;nc|ENSG00000197959|Q9UQ16-4|DNM3;;nc|ENSG00000197959|Q9UQ16|DNM3;;nc|ENSG00000079805|P50570-3|DNM2 5.756755510965983 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17749 94.56 800.0 168320.0 25 0 21433.0 -1 0 132 939.9568481034072 1877.899143273614 2 940.4513427615166 MULTI CID FTMS 0 0 0 17729 100041.3046875 0.4275064184618807 14 -1.211639404296875 20 4 [{I|L}T]{[CP]|[EA]}[VP]{I|L}C{I|L} 9 -1 28.936 0.0 0.0 1.5409 0.0 0.0 0.0 935.39646247262 935.39646247262 1.7601837160063774 0.0 0.0 0.0 0 0.0 2.0 0.9604093769761876 0.0 [{I|L}T]{[CP]|[EA]}[VP]{I|L}C{I|L} 1.5409 - 2819 1 1.376 92178.4 0.5099999904632568 12709 5038 17729 HBL1_DMSO_200M_050219_2,17749 HBL1_DMSO_200M_050219_2,17749, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17751 94.565 6.8 9331800.0 25 0 613710.0 + 29457 QLIDKVWQL 9 95 571.8319195065559 1141.6492860799117 2 571.8326293826103 MULTI CID FTMS 0 0 0 17750 8277415.5 1.0 0 0.0 1 Unmodified _QLIDKVWQL_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 81.89019881105858 0.0170587746866453 4 [Q{I|L}]{I|L}PQG[{M(Oxidation (M))|F}V]Q{I|L} 10 4 + 49.767 0.0 0.0 4.3592 4.3592 81.308 0.0 0.0 0.0 28.052171338372887 2.359083410028333 2.359083410028333 12.976306933210054 0 1.1549471895720984 2.0 0.0 0.7302046884880937 [Q{I|L}]{I|L}PQG[{M(Oxidation (M))|F}V]Q{I|L};[Q{I|L}]{I|L}T[Q{I|L}][PA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[Q{I|L}]{I|L}PEV[KG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[Q{I|L}]T{I|L}[Q{I|L}][PA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[Q{I|L}]{I|L}PQV[VS]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[Q{I|L}]{I|L}[WR][PA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[Q{I|L}]{I|L}[YK][PG]V[QP];[Q{I|L}]{I|L}P{[HG]|PP}[PG]V[QP];[AG]{I|L}{I|L}T[Q{I|L}][PA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[AG]{I|L}{I|L}PEV[KG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4.3592;3.2226;3.0083;2.9388;2.6859;2.5305;2.4145;2.3783;1.8432;1.6289 -;-;-;-;-;-;-;-;-;- 907 + 1 1.388 51931.4 1.0 12710 5039 17750 HBL1_DMSO_200M_050219_2,17751 HBL1_DMSO_200M_050219_2,17751,QLIDKVWQL True True QLIDKVWQL 94.564585 571.83262938261 130007032.0 17750.0 nc|ENSG00000129657|Q92503-3|SEC14L1;;nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;ENST00000587491.5_1_17:75207779-75210102:+|nuORF 6.052079200744629 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17752 94.567 105.0 645820.0 25 0 77240.0 + 21539 LPIVPQLQV 9 90 503.8182744850298 1005.6219960368596 2 503.8186828494072 MULTI CID FTMS 0 0 0 17750 434245.53125 0.9299601496999615 1 -0.0957870483398437 2 Unmodified _LPIVPQLQV_ ENSG00000095015|ENST00000399503|MAP3K1 63.562846038646086 0.0241094678104353 4 [{I|L}P]{I|L}VPQ{I|L}QV 9 0 + 50.142 0.0 0.0 4.9862 4.9862 74.661 0.0 0.0 0.0 16.23757735006378 9.335295873671754 9.335295873671754 3.679767852945943 0 0.9049471895720984 1.3010299956639813 0.0 0.0 + + [{I|L}P]{I|L}VPQ{I|L}QV;[{I|L}P]{I|L}VQP{I|L}QV;[{I|L}P]{I|L}VP[AG]{I|L}QV;[{I|L}P]Q{I|L}VP{I|L}QV;[{I|L}P]{I|L}VPVAAQV;[{I|L}P]{I|L}QVP{I|L}QV;[{I|L}P]{I|L}V[AG]P{I|L}QV;[QP]{I|L}{I|L}VP{I|L}QV;[{I|L}P][AG]{I|L}VP{I|L}QV;[{I|L}P]Q[VP]{I|L}{I|L}QV 4.9862;4.6202;4.0705;4.0665;3.7711;3.7672;3.7046;3.3715;3.1509;3.0423 +;-;-;-;-;-;-;-;-;- + 274 1 1.388 59413.7 1.0 12711 5039 17750 HBL1_DMSO_200M_050219_2,17752 HBL1_DMSO_200M_050219_2,17752,LPIVPQLQV True True LPIVPQLQV 94.566808 503.818682849407 10363509.0 17750.0 ENSG00000095015|ENST00000399503|MAP3K1 5.331812063852946 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17753 94.569 91.0 1124700.0 25 0 124970.0 + 31287 RLYDGLFKVI 10 68 612.3613562178261 1222.7081595024522 2 612.3608276247978 MULTI CID FTMS 0 0 0 17750 436751.96875 0.1149019513249378 -3 0.3269119262695312 3 Unmodified _RLYDGLFKVI_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 23.015651743759182 0.4515786786615758 4 {I|L}{M(Oxidation (M))|F}KV{I|L} 5 5 44.959 0.0 0.0 3.677 0.0 0.0 604.2977628259872 0.0 604.2977628259872 0.0 37.00061205686631 0.0 0.0 0 1.089136830878453 0.0 0.0 0.0 + {I|L}{M(Oxidation (M))|F}KV{I|L} 3.677 + + 122 1 1.388 81825.9 1.0 12712 5039 17750 HBL1_DMSO_200M_050219_2,17753 HBL1_DMSO_200M_050219_2,17753,RLYDGLFKVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17754 94.571 104.0 652360.0 25 0 74952.0 + 29422 QLESIQHSFF 10 91 618.3037989932812 1234.5930450533624 2 618.3043701052666 MULTI CID FTMS 0 0 0 17750 393409.625 0.058027966907758 -3 0.3269119262695312 4 Unmodified _QLESIQHSFF_ REV__ENST00000592992.1_1_19:38895920-38896347:+|nuORF 16.149105407346934 0.5765757077271437 4 [{I|L}A]GED{I|L}A{I|L} 8 -1 63.977 0.0 0.0 5.182 0.0 0.0 0.0 449.1512062188671 449.1512062188671 51.758366874980055 0.0 0.0 0.0 0 0.6989700043360187 2.0 1.4291746928241125 0.0 [{I|L}A]GED{I|L}A{I|L} 5.182 - 537 1 1.388 55474.7 1.0 12713 5039 17750 HBL1_DMSO_200M_050219_2,17754 HBL1_DMSO_200M_050219_2,17754,QLESIQHSFF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17755 94.573 69.0 988310.0 25 0 100560.0 + 20308 LLENLGWIV 9 108 528.8060824149661 1055.597611896732 2 529.3079101443291 MULTI CID FTMS 0 0 0 17750 378935.6875 0.1532462219305062 3 -0.2470474243164062 5 Unmodified _LLENLGWIV_ REV__ENST00000371857.7_1_10:90751224-90770455:+|nuORF;REV__ENST00000466081.5_1_10:90751224-90770411:+|nuORF 20.871210003555333 0.2717241269066626 4 [MT]D 3 -1 25.335 0.0 0.0 2.4 0.0 0.0 0.0 705.4597084145634 705.4597084145634 9.849979783891012 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.7887254899964358 0.0 [MT]D 2.4 - 201 1 1.388 59444.1 1.0 12714 5039 17750 HBL1_DMSO_200M_050219_2,17755 HBL1_DMSO_200M_050219_2,17755,LLENLGWIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17756 94.576 193.0 449280.0 25 0 67043.0 + 43948 YGLPVVVKL 9 116 494.31525568050944 986.6159584278188 2 494.3152648806572 MULTI CID FTMS 0 0 0 17750 149561.203125 0.0252411042109488 5 -0.3846969604492187 6 Unmodified _YGLPVVVKL_ ENSG00000168036|ENST00000349496|CTNNB1 32.30548876998284 0.1201446275138228 4 YG{I|L}PVVVK{I|L} 9 0 + 47.276 0.0 0.0 4.7917 4.7917 83.814 0.0 0.0 0.0 25.63817855577061 13.46787486224656 13.46787486224656 17.25298943058367 0 0.6549471895720985 0.7695510786217261 0.0 0.0 + + YG{I|L}PVVVK{I|L};YG{I|L}PVV[K{I|L}]V 4.7917;3.043 +;- + 365 + 1 1.388 70315.2 1.0 12715 5039 17750 HBL1_DMSO_200M_050219_2,17756 HBL1_DMSO_200M_050219_2,17756,YGLPVVVKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17757 94.58 212.0 275580.0 25 0 16162.0 + -1 LPFFREMNV 9 94 576.796511644364 1151.578470355528 2 576.7969848513603 MULTI CID FTMS 0 0 0 17750 144253.21875 0.6868089938428115 -3 0.3269119262695312 7 Carbamidomethyl (C) _LPFQVNKC(Carbamidomethyl (C))F_ ENST00000496645.5_1_1:159897137-159899822:-|nuORF;ENSG00000085552|ENST00000368094|IGSF9;nc|ENSG00000085552|Q9P2J2-2|IGSF9;ENST00000493195.5_1_1:159897137-159898861:-|nuORF 11.640296217721598 0.521594087909532 4 {I|L}P{M(Oxidation (M))|F} 3 -1 41.559 0.0 0.0 3.6089 0.0 0.0 0.0 791.3541964166624 791.3541964166624 22.149392758355173 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 0.0 0.0 {I|L}P{M(Oxidation (M))|F} 3.6089 + + 99 + 1 1.388 54204.3 1.0 12716 5039 17750 HBL1_DMSO_200M_050219_2,17757 HBL1_DMSO_200M_050219_2,17757,LPFQVNKCF False False LPFFREMNV 94.580427 576.79698485136 2438316.75 17750.0 ENST00000496645.5_1_1:159897137-159899822:-|nuORF;;ENSG00000085552|ENST00000368094|IGSF9;;nc|ENSG00000085552|Q9P2J2-2|IGSF9;;ENST00000493195.5_1_1:159897137-159898861:-|nuORF 2.1675867636998496 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17758 94.594 800.0 165390.0 25 0 13935.0 -1 QEDLYCMNSK 10 141 623.7586708459332 1245.5027887586664 2 623.7595092654228 MULTI CID FTMS 0 0 0 17750 127606.015625 1.0 0 0.0 8 Oxidation (M) _QEDLYCM(Oxidation (M))NSK_ ENSG00000181754|ENST00000369864|AMIGO1 18.373094154950223 0.5392593366289069 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QY{I|L}{M(Oxidation (M))|F} 6 -1 45.6 0.0 0.0 3.6612 0.0 0.0 0.0 447.13441652649766 447.13441652649766 22.67536190926498 0.0 0.0 0.0 0 1.0 1.154901959985743 0.2302046884880938 0.5629529932484498 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QY{I|L}{M(Oxidation (M))|F} 3.6612 - 857 1 1.388 99630.4 0.5799999833106995 12717 5039 17750 HBL1_DMSO_200M_050219_2,17758 HBL1_DMSO_200M_050219_2,17758,QEDLYCMNSK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17759 94.608 800.0 146120.0 25 0 11497.0 + + 36792 KMFESFIESV 10 145 608.795272638398 1215.575992343596 2 608.7980834841728 MULTI CID FTMS 0 0 0 17750 125184.265625 0.936574214786378 7 -0.5607376098632812 9 Unmodified _TEGTHMLLESV_ nc|ENSG00000114302|P13861-2|PRKAR2A;ENSG00000114302|ENST00000265563|PRKAR2A 47.74868867922204 0.1300977870992118 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}{I|L}ESV 10 -1 + 64.542 0.0 0.0 5.3096 5.3096 74.219 0.0 0.0 0.0 2.882216155252536 3.521825181113627 2.882216155252536 2.882216155252536 0 0.0 0.619788758288394 2.1791746928241125 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}{I|L}ESV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}{I|L}ESV;{[CT]|[{M(Oxidation (M))|F}G]}E{I|L}{M(Oxidation (M))|F}QAEY{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}{I|L}ESV;[VS][WY]S{M(Oxidation (M))|F}{I|L}ESV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F}{I|L}ESV;[VS]E[WM]H{I|L}ESV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F}{I|L}ESV;[TP][QP]AQ{M(Oxidation (M))|F}{I|L}ESV;{[CT]|[{M(Oxidation (M))|F}G]}E{I|L}{M(Oxidation (M))|F}[AG]AEY{I|L} 5.3096;5.0725;4.9687;4.8896;4.6185;4.5557;4.457;4.3186;4.2953;4.2148 -;-;-;-;-;-;-;-;-;- 4750 1 1.388 87979.6 0.5600000023841858 12718 5039 17750 HBL1_DMSO_200M_050219_2,17759 HBL1_DMSO_200M_050219_2,17759,TEGTHMLLESV False False KMFESFIESV 94.608112 608.798083484173 1241749.625 17750.0 nc|ENSG00000114302|P13861-2|PRKAR2A;;ENSG00000114302|ENST00000265563|PRKAR2A 5.16838264465332 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17760 94.619 639.0 95496.0 25 0 6626.2 + 29071 QELENYIRSI 10 111 632.8310429545228 1263.6475329758457 2 632.8306762576103 MULTI CID FTMS 0 0 0 17750 123193.9765625 0.4851592098793996 1 -0.0957870483398437 10 Unmodified _QELENYIRSI_ REV__L1PB1_dup10052|chr12:47254957-47257203:+|1.548341044108226|0.3758641288713036|2.04|48.0|63|3|sense 18.1463463914782 0.5430639438673815 4 [{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))M]P{I|L} 6 -1 25.686 0.0 0.0 2.0327 0.0 0.0 0.0 513.3037087795799 513.3037087795799 1.2224122066494658 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))M]P{I|L} 2.0327 - 342 + 1 1.388 53056.1 1.0 12719 5039 17750 HBL1_DMSO_200M_050219_2,17760 HBL1_DMSO_200M_050219_2,17760,QELENYIRSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17761 94.629 572.0 269550.0 25 0 17301.0 + 10150 FPWSEIRNI 9 155 581.304892109068 1160.5952312849358 2 581.3068115115166 MULTI CID FTMS 0 0 0 17750 127762.5859375 0.1502895527510314 -12 1.3764190673828125 11 Unmodified _FPWSEIRNI_ ENSG00000092820|ENST00000367075|EZR;ENSG00000137710|ENST00000645495|RDX;ENSG00000147065|ENST00000360270|MSN;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX 53.832793166522166 0.0319663582346103 4 {I|L}MWSE{I|L}[RN]{I|L} 9 2 + 78.326 0.0 0.0 6.7487 6.7487 81.47 0.0 0.0 0.0 47.89258754269092 6.962724883926654 6.962724883926654 3.4948500216800937 0 0.9731975075880328 2.0 0.3494850021680094 0.3494850021680094 {I|L}MWSE{I|L}[RN]{I|L};{I|L}M{I|L}C(Carbamidomethyl (C))E{I|L}[RN]{I|L};{I|L}M{[DA]|[EG]}SE{I|L}[RN]{I|L};{I|L}M{I|L}[CG]E{I|L}[RN]{I|L};{M(Oxidation (M))|F}PWSE{I|L}[RN]{I|L};{I|L}M{I|L}{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[HQ];{M(Oxidation (M))|F}P{I|L}C(Carbamidomethyl (C))E{I|L}[RN]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W{I|L}{M(Oxidation (M))|F}{I|L}{I|L}PE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}W{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}E;[WP]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}{I|L}PE 6.7487;6.4476;5.9553;5.6542;5.3497;5.2211;5.0486;5.0266;4.8969;4.7682 -;-;-;-;+;-;-;-;-;- + 1016 + 1 1.388 119049.7 1.0 12720 5039 17750 HBL1_DMSO_200M_050219_2,17761 HBL1_DMSO_200M_050219_2,17761,FPWSEIRNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17762 94.64 628.0 190870.0 25 0 14294.0 + + 2332 YQVGPLLGSGGF 12 162 596.8208060302865 1191.6270591273728 2 597.8104125857353 MULTI CID FTMS 0 0 0 -1 0 12 Unmodified _AQKLSYCGPLL_ nc|ENSG00000137193|P11309-2|PIM1;ENSG00000137193|ENST00000373509|PIM1 13.042465956692816 0.7638483625850725 4 [QA]{I|L}KE[{I|L}A]E{I|L} 9 -1 23.192 0.0 0.0 1.9463 0.0 0.0 0.0 193.05700721635552 193.05700721635552 6.369510101267188 0.0 0.0 0.0 0 1.0172203223519531 0.585026652029182 0.5 0.3807196863200844 [QA]{I|L}KE[{I|L}A]E{I|L} 1.9463 - 1680 1 1.388 89115.1 1.0 12721 5039 17750 HBL1_DMSO_200M_050219_2,17762 HBL1_DMSO_200M_050219_2,17762,AQKLSYCGPLL False False YQVGPLLGSGGF 94.640279 597.810412585735 846177.9375 17750.0 nc|ENSG00000137193|P11309-2|PIM1;;ENSG00000137193|ENST00000373509|PIM1 2.0696075757344565 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17763 94.656 800.0 249020.0 25 0 51233.0 + + -1 RLLESLIRL 9 152 556.8610866158348 1111.7076202984697 2 556.8612548708916 MULTI CID FTMS 0 0 0 17750 104584.8984375 0.9728957151101646 -1 0.109283447265625 13 Carbamidomethyl (C) _LVC(Carbamidomethyl (C))LLLGLVL_ nc|ENSG00000111877|Q9NXL9-4|MCM9;ENSG00000111877|ENST00000619706|MCM9;nc|ENSG00000111877|Q9NXL9-2|MCM9 40.44857923139169 0.1528301697436547 4 [{I|L}V]{I|L}WS{I|L}{I|L} 7 -1 40.706 0.0 0.0 3.6615 0.0 0.0 0.0 284.17306728848763 284.17306728848763 6.615232230607262 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 [{I|L}V]{I|L}WS{I|L}{I|L} 3.6615 - 1183 1 1.388 152510.3 0.4799999892711639 12722 5039 17750 HBL1_DMSO_200M_050219_2,17763 HBL1_DMSO_200M_050219_2,17763,LVCLLLGLVL False False RLLESLIRL 94.655581 556.861254870892 950171.4375 17750.0 nc|ENSG00000111877|Q9NXL9-4|MCM9;;ENSG00000111877|ENST00000619706|MCM9;;nc|ENSG00000111877|Q9NXL9-2|MCM9 3.958128849665324 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17765 94.66 17.0 3297700.0 25 0 279160.0 + 1204 AIDPHLLLSV 10 84 539.3178698332674 1076.6211867333348 2 539.8173095583916 MULTI CID FTMS 0 0 0 17764 2723704.25 0.9554519512726228 -2 0.2050704956054687 1 Unmodified _AIDPHLLLSV_ ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A 19.256988751693697 0.5244284437930726 4 [{I|L}A]GHD{I|L}{I|L}V 8 4 44.614 0.0 0.0 4.1439 0.0 0.0 0.0 255.1333943659804 255.1333943659804 19.47621246364342 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]GHD{I|L}{I|L}V 4.1439 - 343 1 1.405 52814.5 1.0 12723 5040 17764 HBL1_DMSO_200M_050219_2,17765 HBL1_DMSO_200M_050219_2,17765,AIDPHLLLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17766 94.662 58.0 833690.0 25 0 129560.0 + 6135 DSYPVVNLI 9 84 510.27462450926873 1018.5346960853376 2 510.2754394412041 MULTI CID FTMS 0 0 0 17764 642193.75 0.8077594464680816 1 -0.0908966064453125 2 Unmodified _DSYPVVNLI_ ENSG00000188566|ENST00000684003|NDOR1;nc|ENSG00000188566|Q9UHB4-2|NDOR1;nc|ENSG00000188566|Q9UHB4-3|NDOR1;nc|ENSG00000188566|Q9UHB4-4|NDOR1 28.486842064014134 0.1687311288560894 4 [VP]VN{I|L} 5 4 24.437 0.0 0.0 2.3992 0.0 0.0 0.0 493.1944610602 493.1944610602 0.8939438749951734 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 + [VP]VN{I|L} 2.3992 + + 137 1 1.405 42760.3 1.0 12724 5040 17764 HBL1_DMSO_200M_050219_2,17766 HBL1_DMSO_200M_050219_2,17766,DSYPVVNLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17767 94.665 166.0 488830.0 25 0 54762.0 + 17240 KLLPQLTYL 9 104 544.8392424593401 1087.66393198548 2 544.8392211794853 MULTI CID FTMS 0 0 0 17764 368377.8125 1.0 0 0.0 3 Unmodified _KLLPQLTYL_ ENSG00000136938|ENST00000339399|ANP32B;ENSG00000140350|ENST00000465139|ANP32A;ENST00000483551.6_1_15:69072422-69081590:-|nuORF;ENST00000486769.1_1_9:100760930-100767440:+|nuORF;nc|ENSG00000136938|Q92688-2|ANP32B 53.832793166522166 0.0319663582346103 4 [QP]{I|L}{I|L}K{I|L}TY{I|L} 9 4 + 64.135 0.0 0.0 5.8966 5.8966 77.227 0.0 0.0 0.0 4.878428407800328 16.478174818886373 4.878428407800328 3.0102999566398125 0 0.8807196863200843 0.0 0.8494850021680094 0.0 [QP]{I|L}{I|L}K{I|L}TY{I|L};[QP]{I|L}{I|L}KT{I|L}Y{I|L};[K{I|L}]{I|L}[QP]{I|L}TY{I|L};[K{I|L}]{I|L}[QP]T{I|L}Y{I|L};[Q{I|L}]P{I|L}K{I|L}TY{I|L};[QP]{I|L}T[K{I|L}]{I|L}Y{I|L};[Q{I|L}]P{I|L}KT{I|L}Y{I|L};[VP]AA{I|L}K{I|L}TY{I|L};[{I|L}A]GP{I|L}K{I|L}TY{I|L};[VP]AA{I|L}KT{I|L}Y{I|L} 5.8966;5.6198;5.448;5.1713;4.7004;4.5591;4.4236;4.1306;4.049;3.8538 -;-;+;-;-;-;-;-;-;- + 320 1 1.405 67869.2 1.0 12725 5040 17764 HBL1_DMSO_200M_050219_2,17767 HBL1_DMSO_200M_050219_2,17767,KLLPQLTYL True True KLLPQLTYL 94.665097 544.839221179485 2812658.25 17764.0 nc|ENSG00000136938|Q92688-2|ANP32B;;ENST00000483551.6_1_15:69072422-69081590:-|nuORF;;ENSG00000140350|ENST00000465139|ANP32A;;ENST00000486769.1_1_9:100760930-100767440:+|nuORF;;ENSG00000136938|ENST00000339399|ANP32B 6.317962487538655 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17768 94.67 261.0 446600.0 25 0 30912.0 + -1 GQLGLVCVFLS 11 137 596.8208060302865 1191.6270591273728 2 596.8211547732353 MULTI CID FTMS 0 0 0 17764 301617.875 0.1601035913948358 -3 0.3337936401367187 4 Carbamidomethyl (C) _GQLGLVC(Carbamidomethyl (C))VFLS_ REV__ENST00000540306.5_2_17:41603965-41604127:+|nuORF 31.26834338654808 0.3580123756476716 4 {[QG]|[NA]}{I|L}MGK{I|L}[{M(Oxidation (M))|F}V]S{I|L} 11 -1 + 40.562 0.0 0.0 3.4039 3.4039 62.28 0.0 0.0 0.0 11.863799508754912 11.402232052224392 11.402232052224392 0.0749080584436114 0 1.25 0.6575773191777937 0.6139829889124311 0.0 {[QG]|[NA]}{I|L}MGK{I|L}[{M(Oxidation (M))|F}V]S{I|L};{[QG]|[NA]}M{I|L}GK{I|L}[{M(Oxidation (M))|F}V]S{I|L};[DN]S{I|L}GK{I|L}[W{M(Oxidation (M))|F}]{I|L};[DN]S{I|L}GQ{I|L}P[HV]{I|L};[DN]S[{M(Oxidation (M))|F}V]{I|L}A[WK]{I|L};[DN]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}[{M(Oxidation (M))|F}V]S{I|L};{[QG]|[NA]}[WD]K{I|L}[{M(Oxidation (M))|F}V]S{I|L};[{M(Oxidation (M))|F}V]S[DN]{I|L}A[WK]{I|L};[{M(Oxidation (M))|F}V]S[QT]{I|L}A[WK]{I|L};[DN]S{I|L}GK{I|L}[W{I|L}]{M(Oxidation (M))|F} 3.4039;3.3977;2.5322;2.4161;2.2647;1.9847;1.9216;1.9178;1.9178;1.9109 -;-;-;-;-;-;-;-;-;- 1561 + 1 1.405 89683.5 1.0 12726 5040 17764 HBL1_DMSO_200M_050219_2,17768 HBL1_DMSO_200M_050219_2,17768,GQLGLVCVFLS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17769 94.678 443.0 215590.0 25 0 43942.0 44102 YKFQRKRRHKL 11 116 520.6499675134246 1558.9280731404738 3 520.6502563357353 MULTI CID FTMS 0 0 0 17764 209921.171875 0.7729382787587795 -1 0.0957870483398437 5 Unmodified _YKFQRKRRHKL_ ENSG00000214376|ENST00000409977|VSTM5 0.0833504608790944 0.8747546825782322 4 {I|L} 1 10 11.42 0.0 0.0 0.73255 0.0 0.0 1427.8332835670346 0.0 1427.8332835670346 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.73255 + + 174 + 1 1.405 87705.3 1.0 12727 5040 17764 HBL1_DMSO_200M_050219_2,17769 HBL1_DMSO_200M_050219_2,17769,YKFQRKRRHKL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17770 94.68 129.0 403240.0 25 0 57574.0 + 5667 DPFQQTFIV 9 80 547.7796736698255 1093.5447944064508 2 547.7797729372978 MULTI CID FTMS 0 0 0 17764 164120.125 1.0 0 0.0 6 Unmodified _DPFQQTFIV_ ENSG00000163349|ENST00000426820|HIPK1;nc|ENSG00000163349|Q86Z02-2|HIPK1;nc|ENSG00000163349|Q86Z02-3|HIPK1;nc|ENSG00000163349|Q86Z02-4|HIPK1 27.628801355627647 0.1796483985696185 4 {[MS]|[{M(Oxidation (M))|F}A]}GPDQT{M(Oxidation (M))|F}{I|L}V 10 5 + 47.657 0.0 0.0 4.358 4.358 72.775 0.0 0.0 0.0 4.03212513775344 8.507112333562858 4.03212513775344 4.03212513775344 0 0.5484550065040282 0.0 0.8807196863200843 0.0 {[MS]|[{M(Oxidation (M))|F}A]}GPDQT{M(Oxidation (M))|F}{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PDQT{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}GPQDT{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}GPD[AG]T{M(Oxidation (M))|F}{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PQDT{M(Oxidation (M))|F}{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PD[AG]T{M(Oxidation (M))|F}{I|L}V;{[QN]|[E{I|L}]|[KN]}[MN]QT{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}GP[AG]DT{M(Oxidation (M))|F}{I|L}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P[AG]DT{M(Oxidation (M))|F}{I|L}V;[DP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QT{M(Oxidation (M))|F}{I|L}V 4.358;3.9893;3.5852;3.5199;3.2165;3.1472;2.834;2.7471;2.3744;2.3213 -;-;-;-;-;-;-;-;-;+ + 350 1 1.405 44835.3 1.0 12728 5040 17764 HBL1_DMSO_200M_050219_2,17770 HBL1_DMSO_200M_050219_2,17770,DPFQQTFIV False True DPFQQTFIV 94.680472 547.779772937298 1413834.375 17764.0 nc|ENSG00000163349|Q86Z02-3|HIPK1;;nc|ENSG00000163349|Q86Z02-4|HIPK1;;ENSG00000163349|ENST00000426820|HIPK1;;nc|ENSG00000163349|Q86Z02-2|HIPK1 4.348129351933797 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17771 94.684 190.0 394640.0 25 0 42022.0 + 44447 YMLEHVITL 9 120 559.799392278521 1117.584231623842 2 559.7997924685478 MULTI CID FTMS 0 0 0 17764 156303.390625 0.3997394029917307 -2 0.2050704956054687 7 Unmodified _YMLEHVITL_ ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF 28.486842064014134 0.1687311288560894 4 {[QN]|[E{I|L}]|[KN]}HV{I|L}MY[{I|L}T] 9 4 + 50.652 0.0 0.0 4.5323 4.5323 50.639 0.0 0.0 0.0 7.498774732165998 38.43372183701504 7.498774732165998 0.0 0 0.3807196863200844 1.5228787452803376 0.2742275032520141 0.0 {[QN]|[E{I|L}]|[KN]}HV{I|L}MY[{I|L}T];{[QN]|[E{I|L}]|[KN]}HVMY{I|L}[{I|L}T];{[QN]|[E{I|L}]|[KN]}HVM{I|L}Y[{I|L}T];{[QN]|[E{I|L}]|[KN]}H{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{I|L}[{I|L}T];{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{I|L}{I|L}MY[{I|L}T];{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{I|L}MY{I|L}[{I|L}T];[{I|L}T][YT]{I|L}MY[{I|L}T];[{I|L}T][YT]MY{I|L}[{I|L}T];{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{I|L}M{I|L}Y[{I|L}T];[{I|L}T][YT]M{I|L}Y[{I|L}T] 4.5323;4.5323;3.9936;3.7693;3.3681;3.3681;3.3577;3.3577;2.8294;2.819 -;-;-;-;-;-;-;-;-;- 642 1 1.405 60975.8 1.0 12729 5040 17764 HBL1_DMSO_200M_050219_2,17771 HBL1_DMSO_200M_050219_2,17771,YMLEHVITL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17772 94.69 342.0 329460.0 25 0 32107.0 + 43849 YFIDTDLNQL 10 137 621.3066856125811 1240.598818291962 2 621.3072997927666 MULTI CID FTMS 0 0 0 17764 152526.453125 0.5130905273214318 -2 0.2050704956054687 8 Unmodified _YFIDTDLNQL_ ENSG00000174405|ENST00000442234|LIG4 54.773552608820026 0.052133998764723 4 {[DA]|[EG]}{I|L}{I|L}{I|L}AVT{M(Oxidation (M))|F} 9 9 27.31 0.0 0.0 2.2013 0.0 0.0 0.0 294.04622823014864 294.04622823014864 3.711090220168831 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {[DA]|[EG]}{I|L}{I|L}{I|L}AVT{M(Oxidation (M))|F} 2.2013 - 4408 1 1.405 85142.3 1.0 12730 5040 17764 HBL1_DMSO_200M_050219_2,17772 HBL1_DMSO_200M_050219_2,17772,YFIDTDLNQL True True YFIDTDLNQL 94.690355 621.307299792767 4333462.0 17764.0 ENSG00000174405|ENST00000442234|LIG4 5.839656352996826 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17773 94.699 508.0 218450.0 25 0 16673.0 -1 0 93 753.382203639633 2257.124781519098 3 753.7181884646416 MULTI CID FTMS 0 0 0 17764 152607.515625 0.8272063671697637 -4 0.422698974609375 9 4 [NP]N{I|L}{I|L}T{[DS]|[MA]|[CV]|TT}{I|L}{I|L}N 11 -1 51.559 0.0 0.0 2.2843 0.0 0.0 0.0 1059.4627194371476 1059.4627194371476 16.23136674473887 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.6861818737241735 [NP]N{I|L}{I|L}T{[DS]|[MA]|[CV]|TT}{I|L}{I|L}N 2.2843 - 2323 1 1.405 84345.1 1.0 12731 5040 17764 HBL1_DMSO_200M_050219_2,17773 HBL1_DMSO_200M_050219_2,17773, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17774 94.704 223.0 461870.0 25 0 40213.0 + 11774 GLLAVLRPL 9 97 476.3211709827705 950.6277890323412 2 476.3214599490166 MULTI CID FTMS 0 0 0 17764 144973.671875 0.0995181566954246 -5 0.5028457641601562 10 Unmodified _GLLAVLRPL_ ENSG00000168569|ENST00000307366|TMEM223 60.38955033654506 0.025866396858536 4 {[VA]|[{I|L}G]}{I|L}AV{I|L}[RP]{I|L} 9 0 + 72.285 0.0 0.0 7.6039 7.6039 87.785 0.0 0.0 0.0 56.259103962389005 10.15703808010521 10.15703808010521 6.505149978319906 0 1.274227503252014 2.0 0.0 0.6109243748081782 + + {[VA]|[{I|L}G]}{I|L}AV{I|L}[RP]{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}G{I|L}[RP]{I|L};{[VA]|[{I|L}G]}{I|L}A{I|L}V[RP]{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}AV[RP]{I|L} 7.6039;6.9196;6.4399;5.7556 +;-;-;- + 439 + 1 1.405 81723.4 1.0 12732 5040 17764 HBL1_DMSO_200M_050219_2,17774 HBL1_DMSO_200M_050219_2,17774,GLLAVLRPL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17775 94.717 800.0 192240.0 25 0 8209.2 -1 0 134 820.055642740006 2457.1450988202178 3 820.7244140505791 MULTI CID FTMS 0 0 0 17764 123916.0546875 0.7709335645886224 -2 0.2050704956054687 11 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 58.37 0.0 0.0 2.3755 0.0 0.0 0.0 1416.5316832788328 1416.5316832788328 39.32889097984422 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.3755 - 1616 1 1.405 110904.4 0.5299999713897705 12733 5040 17764 HBL1_DMSO_200M_050219_2,17775 HBL1_DMSO_200M_050219_2,17775, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17776 94.731 800.0 179390.0 25 0 17200.0 + 44578 YPFIFPLHKV 10 119 420.909628789812 1259.707056969636 3 420.9096252322197 MULTI CID FTMS 0 0 0 17764 121590.5390625 0.879916445306016 -2 0.2050704956054687 12 Unmodified _YPFIFPLHKV_ ENSG00000109929|ENST00000264027|SC5D 56.17704186161178 0.0466144807663799 4 YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}P{I|L}HKV 10 0 + 80.806 0.0 0.0 6.4147 6.4147 84.421 0.0 0.0 0.0 27.501225267834 6.881616030877282 6.881616030877282 6.881616030877282 0 1.4361818737241734 1.0969100130080565 0.0 0.1421590589602531 + + YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}P{I|L}HKV;YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}P{I|L}V[HK];YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}V[{I|L}P][HK];YP{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}V[HK]P{I|L};[HK]{I|L}[{I|L}T]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}H{I|L}[RH]V{[QN]|[E{I|L}]|[KN]} 6.4147;5.8684;4.5976;4.5585;2.7068;2.4997 +;-;-;-;-;- + 530 + 1 1.405 118146.6 0.449999988079071 12734 5040 17764 HBL1_DMSO_200M_050219_2,17776 HBL1_DMSO_200M_050219_2,17776,YPFIFPLHKV True True YPFIFPLHKV 94.731178 420.90962523222 1823623.25 17764.0 ENSG00000109929|ENST00000264027|SC5D 7.694543361663818 3.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17777 94.746 800.0 134610.0 25 0 6393.8 + 43426 WRNWRWWQER 10 138 801.8942471516083 1601.7739413700165 2 801.8955566287041 MULTI CID FTMS 0 0 0 17764 104562.1328125 0.8851723585574391 -1 0.0957870483398437 13 Unmodified _WRNWRWWQER_ REV__ENST00000510393.5_1_1:16083148-16084686:+|nuORF 0.4007161486938917 0.7247829448918255 4 {[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}QQSA{M(Oxidation (M))|F}YE{I|L}{I|L} 13 -1 + 101.42 0.0 0.0 6.3316 6.3316 77.243 0.0 0.0 0.0 2.07280713621401 9.943508928956462 2.07280713621401 2.07280713621401 0 0.9419628234359578 1.6989700043360187 2.028659694992122 1.4749073637206092 {[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}QQSA{M(Oxidation (M))|F}YE{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}QQSA{M(Oxidation (M))|F}YE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}D{I|L}V{[YD]|[{M(Oxidation (M))|F}M]}A{M(Oxidation (M))|F}YE{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{I|L}V{[YD]|[{M(Oxidation (M))|F}M]}A{M(Oxidation (M))|F}YE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}DV{I|L}{[YD]|[{M(Oxidation (M))|F}M]}A{M(Oxidation (M))|F}YE{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}EV{I|L}{[YD]|[{M(Oxidation (M))|F}M]}A{M(Oxidation (M))|F}YE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}[AG]QSA{M(Oxidation (M))|F}YE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}Q[AG]SA{M(Oxidation (M))|F}YE{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}Q[AG]SA{M(Oxidation (M))|F}YE{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}[AG]QSA{M(Oxidation (M))|F}YE{I|L}{I|L} 6.3316;6.2022;6.1429;6.0135;5.9139;5.7845;5.7652;5.7652;5.6358;5.6358 -;-;-;-;-;-;-;-;-;- 16826 1 1.405 75143.9 0.5099999904632568 12735 5040 17764 HBL1_DMSO_200M_050219_2,17777 HBL1_DMSO_200M_050219_2,17777,WRNWRWWQER False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17779 94.751 14.0 3697000.0 25 0 397960.0 + 10397 FSWEGAFQHV 10 81 604.2805177427076 1206.5464825522151 2 604.2808715701103 MULTI CID FTMS 0 0 0 17778 2986790.0 0.7103899154167472 1 -0.06036376953125 1 Unmodified _FSWEGAFQHV_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000434365.1_1_X:114938170-114938437:+|nuORF;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 55.50274090549119 0.048383292844968 4 {M(Oxidation (M))|F}SWEGA{M(Oxidation (M))|F}Q[HV] 10 0 + 74.117 0.0 0.0 6.1429 6.1429 79.248 0.0 0.0 0.0 51.4363034371533 7.269987279362624 7.269987279362624 3.521825181113627 0 0.6747425010840047 0.0 0.4247425010840047 0.6747425010840047 + + {M(Oxidation (M))|F}SWEGA{M(Oxidation (M))|F}Q[HV];{M(Oxidation (M))|F}SWEQ{M(Oxidation (M))|F}Q[HV];{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KQ]AGE[VS]SE;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KQ]AWWSE;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KQ]QE[VS]SE;{M(Oxidation (M))|F}SWEGA{M(Oxidation (M))|F}[AG][HV];[WE][{I|L}T]AGE[VS]SE;{M(Oxidation (M))|F}SWEQ{M(Oxidation (M))|F}[AG][HV];{M(Oxidation (M))|F}S{[DA]|[EG]}WA{M(Oxidation (M))|F}Q[HV];{M(Oxidation (M))|F}S[VS]WA{M(Oxidation (M))|F}Q[HV] 6.1429;5.851;5.3654;5.2316;5.0699;4.8241;4.7252;4.5286;4.4863;4.4863 +;-;-;-;-;-;-;-;-;- + 749 + 1 1.415 39606.2 1.0 12736 5041 17778 HBL1_DMSO_200M_050219_2,17779 HBL1_DMSO_200M_050219_2,17779,FSWEGAFQHV True True FSWEGAFQHV 94.751263 604.28087157011 66640940.0 17778.0 ENSG00000254772|ENST00000329251|EEF1G;;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;;nc|ENSG00000254772|P26641-2|EEF1G;;ENST00000434365.1_1_X:114938170-114938437:+|nuORF 10.429539362589518 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17780 94.752 36.0 1693700.0 25 0 282560.0 + 35806 SVITQVFHV 9 79 515.2888164174124 1028.5630799016246 2 515.2892333865166 MULTI CID FTMS 0 0 0 17778 1095029.375 0.6559689929678416 1 -0.06036376953125 2 Unmodified _SVITQVFHV_ ENSG00000115677|ENST00000310931|HDLBP;nc|ENSG00000115677|Q00341-2|HDLBP 46.020951573049366 0.0490941689151868 4 [VS]{I|L}TQV{M(Oxidation (M))|F}[HV] 9 0 + 76.009 0.0 0.0 7.3898 7.3898 92.723 0.0 0.0 0.0 44.430899228264 7.147642715192504 7.147642715192504 12.703037561203844 0 0.7134679910804405 2.0 0.3494850021680094 0.3494850021680094 + + [VS]{I|L}TQV{M(Oxidation (M))|F}[HV];[VS]{I|L}T[AG]V{M(Oxidation (M))|F}[HV];[VS][WK]QT{I|L}[PA];[VS]{I|L}V[QT]{M(Oxidation (M))|F}[HV];[VS]{I|L}V[WE]PS{I|L};[VS]{I|L}V[WE]T[VP];[VS][WK][AG]T{I|L}[PA];[VS][WR]V{M(Oxidation (M))|F}[HV];[{I|L}T]Q[C(Carbamidomethyl (C))K]V{I|L}[PA];[R{M(Oxidation (M))|F}]PQV{M(Oxidation (M))|F}[HV] 7.3898;6.1548;5.524;5.1761;5.1227;5.0284;4.6287;4.2694;4.0413;3.3182 +;-;-;-;-;-;-;-;-;- + 452 + 1 1.415 51943.0 1.0 12737 5041 17778 HBL1_DMSO_200M_050219_2,17780 HBL1_DMSO_200M_050219_2,17780,SVITQVFHV True True SVITQVFHV 94.752443 515.289233386517 39326604.0 17778.0 ENSG00000115677|ENST00000310931|HDLBP;;nc|ENSG00000115677|Q00341-2|HDLBP 7.607645829518636 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17781 94.754 34.0 1789600.0 25 0 202710.0 + 12145 GQLEFRALL 9 69 523.8028760683 1045.5911992033998 2 523.8036376833916 MULTI CID FTMS 0 0 0 17778 1396379.25 1.0 0 0.0 3 Unmodified _GQLEFRALL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000224411|Q14568|HSP90AA2P 43.77239144664712 0.0547478964384323 4 {[QG]|[NA]}{I|L}E{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L} 9 0 + 59.855 0.0 0.0 5.7245 5.7245 89.935 0.0 0.0 0.0 38.84189037913593 14.141974908773918 14.141974908773918 59.85531242661757 0 1.8494850021680087 1.0 0.4247425010840047 0.0 + + {[QG]|[NA]}{I|L}E{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L} 5.7245 + + 64 + 1 1.415 53093.5 1.0 12738 5041 17778 HBL1_DMSO_200M_050219_2,17781 HBL1_DMSO_200M_050219_2,17781,GQLEFRALL True True GQLEFRALL 94.75362 523.803637683392 12708103.0 17778.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1;;nc|ENSG00000183199|Q58FF7|HSP90AB3P 5.135748863220215 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17782 94.755 40.0 1488500.0 25 0 185040.0 + 20478 MPRDILIVV 9 73 528.3179820745974 0 528.3179809451103 PEAK CID FTMS 0 0 0 17778 1068543.5 0.4977961131556077 -3 0.2959671020507812 4 Unmodified _LLLCPWVIV_ nc|ENSG00000171766|P50440-3|GATM;nc|ENSG00000171766|P50440-2|GATM;ENSG00000171766|ENST00000396659|GATM 20.871210003555333 0.1931737080476581 4 V{I|L}{I|L}{I|L} 4 6 27.295 0.0 0.0 2.5881 0.0 0.0 117.07918817087588 496.1971834772094 613.2763716480853 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 V{I|L}{I|L}{I|L} 2.5881 - 39 + 1 1.415 57653.3 1.0 12739 5041 17778 HBL1_DMSO_200M_050219_2,17782 HBL1_DMSO_200M_050219_2,17782,LLLCPWVIV False False MPRDILIVV 94.754799 528.31798094511 41795107.8125 17778.0 nc|ENSG00000171766|P50440-3|GATM;;nc|ENSG00000171766|P50440-2|GATM;;ENSG00000171766|ENST00000396659|GATM 3.911224206288656 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17783 94.757 96.0 587530.0 25 0 83355.0 + 13283 HIPDVITYL 9 70 535.7982331066675 1069.5819132801348 2 535.7982055544853 MULTI CID FTMS 0 0 0 17778 439788.1875 0.1905117107419131 5 -0.374053955078125 5 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 30.22481116460888 0.1466181017706357 4 [VP]D{I|L}H{I|L}TY{I|L} 9 4 + 38.311 0.0 0.0 3.5819 3.5819 71.655 0.0 0.0 0.0 4.762036441594198 23.7068312072195 4.762036441594198 5.228787452803374 0 0.6989700043360187 0.0 0.5 0.0 [VP]D{I|L}H{I|L}TY{I|L};[DP]V{I|L}H{I|L}TY{I|L};{[QN]|[E{I|L}]|[KN]}[YR]{I|L}TY{I|L};[{I|L}V][DP]H{I|L}TY{I|L};[{I|L}V][WY]{I|L}TY{I|L} 3.5819;3.093;2.4748;1.9456;1.786 -;-;-;-;- 137 1 1.415 50845.4 1.0 12740 5041 17778 HBL1_DMSO_200M_050219_2,17783 HBL1_DMSO_200M_050219_2,17783,HIPDVITYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17784 94.759 103.0 436670.0 25 0 50325.0 + 18274 KVIEINPYLL 10 61 601.3636736993155 1200.712794465431 2 601.3640624880791 MULTI CID FTMS 0 0 0 17778 415331.96875 0.570250250464996 2 -0.1552734375 6 Unmodified _KVIEINPYLL_ ENSG00000100804|ENST00000361611|PSMB5;ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000100804|P28074-2|PSMB5;nc|ENSG00000204264|P28062-2|PSMB8 28.49450938151212 0.328477364964909 4 E{I|L}NPY{I|L}{I|L} 7 3 43.276 0.0 0.0 3.6042 0.0 0.0 340.24482924629064 0.0 340.24482924629064 0.0 19.09456678509251 0.0 0.0 0 0.968765315847925 0.0 0.0 0.4247425010840047 + E{I|L}NPY{I|L}{I|L} 3.6042 + + 104 1 1.415 38586.8 1.0 12741 5041 17778 HBL1_DMSO_200M_050219_2,17784 HBL1_DMSO_200M_050219_2,17784,KVIEINPYLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17785 94.762 117.0 619110.0 25 0 63082.0 + 5732 DPLVPPQLTI 10 100 546.8190938530392 1091.6236347728784 2 546.8190795779228 MULTI CID FTMS 0 0 0 17778 242164.59375 0.6724041032851392 2 -0.1552734375 7 Unmodified _DPLVPPQLTI_ ENSG00000023228|ENST00000233190|NDUFS1;nc|ENSG00000023228|P28331-2|NDUFS1;nc|ENSG00000023228|P28331-3|NDUFS1;nc|ENSG00000023228|P28331-4|NDUFS1;nc|ENSG00000023228|P28331-5|NDUFS1 45.69961567697781 0.105390671673896 4 [{I|L}P]DVPK 6 7 35.94 0.0 0.0 3.2923 0.0 0.0 0.0 439.2207776774284 439.2207776774284 11.08349385648225 0.0 0.0 0.0 0 0.8807196863200843 1.2218487496163564 0.3054621874040891 0.0 [{I|L}P]DVPK 3.2923 - 562 1 1.415 63840.6 1.0 12742 5041 17778 HBL1_DMSO_200M_050219_2,17785 HBL1_DMSO_200M_050219_2,17785,DPLVPPQLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17786 94.765 204.0 502430.0 25 0 78190.0 + 13850 HVIDLDDATFL 11 104 629.8190332109518 1257.6235134887036 2 629.8198730349541 MULTI CID FTMS 0 0 0 17778 194156.09375 0.164339609226387 -3 0.2959671020507812 8 Unmodified _HVIDLDDATFL_ ENSG00000152219|ENST00000282032|ARL14EP 56.17704186161178 0.0846604386095034 4 [HV]{I|L}D{I|L}DDAT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 11 0 + 53.733 0.0 0.0 4.2726 4.2726 82.01 0.0 0.0 0.0 12.727340617456342 32.675388538393726 12.727340617456342 18.193611131935967 0 0.5 1.0457574905606752 0.805462187404089 0.0 + + [HV]{I|L}D{I|L}DDAT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}DDAT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[HV][KQ]{[CP]|[EA]}DAT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YWWVT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}[HV]{I|L}DWT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YV]{[VA]|[{I|L}G]}DAT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}WWVT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[HV]{I|L}D{I|L}D{[SA]|[TG]}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[HV][KQ][WE]AT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[HV][KQ]{[CP]|[EA]}WT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.2726;2.8259;2.4023;2.319;2.3031;2.2036;2.1735;2.1594;1.8794;1.8794 +;-;-;-;-;-;-;-;-;- + 570 1 1.415 81328.7 1.0 12743 5041 17778 HBL1_DMSO_200M_050219_2,17786 HBL1_DMSO_200M_050219_2,17786,HVIDLDDATFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17787 94.775 533.0 233390.0 25 0 35599.0 + 4675 DAYVLPKLYV 10 127 590.8342673449122 1179.6539817566245 2 590.8349487185478 MULTI CID FTMS 0 0 0 17778 154809.890625 0.0044311152331493 9 -0.7038345336914062 9 Unmodified _DAYVLPKLYV_ ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 60.07390631473393 0.0363923079357811 4 {[DA]|[EG]}YV{I|L} 5 5 43.293 0.0 0.0 3.67 0.0 0.0 0.0 615.3513443877367 615.3513443877367 5.4953389124472665 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.2887254899964357 0.0 + {[DA]|[EG]}YV{I|L} 3.67 + + 909 1 1.415 93622.2 1.0 12744 5041 17778 HBL1_DMSO_200M_050219_2,17787 HBL1_DMSO_200M_050219_2,17787,DAYVLPKLYV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17788 94.783 479.0 214570.0 25 0 52187.0 + 38837 TVIATNILL 9 129 479.3028306533974 956.5911083735948 2 479.3028137087822 MULTI CID FTMS 0 0 0 17778 153802.703125 0.8611068780087954 -1 0.0908966064453125 10 Unmodified _TVIATNILL_ ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000466479.1_1_7:56130338-56130775:+|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A 74.42276476219924 0.019389277360085 4 {[TV]|[{I|L}S]}QA{I|L}S{I|L}{I|L}{I|L} 9 3 + 72.418 0.0 0.0 7.5704 7.5704 78.866 0.0 0.0 0.0 15.051499783199064 9.889917747712644 9.889917747712644 0.8768453136694063 0 0.6989700043360187 2.0 1.274227503252014 0.7614393726401688 {[TV]|[{I|L}S]}QA{I|L}S{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}AQS{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}QA{I|L}{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}AQ{I|L}S{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}TA{I|L}S{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[AG]A{I|L}S{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}A[AG]S{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[KP]SS{I|L}{I|L}{I|L};[{I|L}A]{[QS]|[NT]}{I|L}S{I|L}{I|L}{I|L};[{I|L}V]TAQS{I|L}{I|L}{I|L} 7.5704;7.4788;6.3351;6.2434;5.997;5.8118;5.7202;5.3756;5.2577;5.0512 -;-;-;-;-;-;-;-;-;- 1418 1 1.415 81957.4 1.0 12745 5041 17778 HBL1_DMSO_200M_050219_2,17788 HBL1_DMSO_200M_050219_2,17788,TVIATNILL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17789 94.796 726.0 201600.0 25 0 44922.0 + 14908 ILLKALTNL 9 162 499.8346593852698 997.6547658373396 2 499.8345825076103 MULTI CID FTMS 0 0 0 17778 116096.2734375 1.0 0 0.0 11 Unmodified _ILLKALTNL_ ENSG00000178982|ENST00000248342|EIF3K;ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K 96.28474662873226 0.0124266067997264 4 {I|L}{I|L}NTS{I|L}{I|L}{I|L} 8 5 48.048 0.0 0.0 4.8161 0.0 0.0 0.0 127.08563850628153 127.08563850628153 27.22209847777256 0.0 0.0 0.0 0 0.5 2.0 1.3996498648046138 0.0 {I|L}{I|L}NTS{I|L}{I|L}{I|L} 4.8161 - 3595 1 1.415 114637.2 1.0 12746 5041 17778 HBL1_DMSO_200M_050219_2,17789 HBL1_DMSO_200M_050219_2,17789,ILLKALTNL True True ILLKALTNL 94.795903 499.83458250761 919020.3125 17778.0 ENST00000586932.5_1_19:39109833-39116793:+|nuORF;;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;;ENSG00000178982|ENST00000248342|EIF3K;;nc|ENSG00000178982|Q9UBQ5-2|EIF3K 3.133672952651977 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17790 94.799 144.0 481760.0 25 0 105860.0 40406 VIERLEDL 8 118 493.7786789939277 0 493.7770873904228 PEAK CID FTMS 0 0 0 17778 115936.0625 0.420017299040175 -3 0.2959671020507812 12 Unmodified _VIERLEDL_ ENSG00000165935|ENST00000535986|SMCO2 20.871210003555333 0.4015059659087983 4 C(Carbamidomethyl (C))AV 3 8 7.7917 0.0 0.0 0.7906 0.0 0.0 360.21857112405627 292.1665133111938 652.3850844352501 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))AV 0.7906 - 111 + 1 1.415 56139.3 1.0 12747 5041 17778 HBL1_DMSO_200M_050219_2,17790 HBL1_DMSO_200M_050219_2,17790,VIERLEDL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17791 94.807 454.0 142420.0 25 0 29525.0 + 22980 LSGLLFGFI 9 105 483.7847146685895 965.5548764039788 2 483.7858154177666 MULTI CID FTMS 0 0 0 17778 91645.7265625 0.0416736711009626 7 -0.4999542236328125 13 Unmodified _LSGLLFGFI_ REV__ENSG00000139155|ENST00000266509|SLCO1C1;REV__nc|ENSG00000139155|Q9NYB5-2|SLCO1C1;REV__nc|ENSG00000139155|Q9NYB5-3|SLCO1C1;REV__nc|ENSG00000139155|Q9NYB5-4|SLCO1C1 23.1484247019978 0.2366544122328345 4 {[TV]|[{I|L}S]}H{I|L}[DG]{I|L}V{I|L} 9 -1 + 30.721 0.0 0.0 3.1817 3.1817 62.74 0.0 0.0 0.0 0.597376685559432 7.727562184969376 0.597376685559432 0.597376685559432 0 0.3182503180159344 0.958607314841775 0.5610312860818771 0.0 {[TV]|[{I|L}S]}H{I|L}[DG]{I|L}V{I|L};[H{I|L}]S{I|L}[DG]{I|L}V{I|L};[H{I|L}]VT[DG]{I|L}V{I|L};{[TV]|[{I|L}S]}H{I|L}V{[DA]|[EG]}V{I|L};[H{I|L}]S{I|L}V{[DA]|[EG]}V{I|L};[HV]T{I|L}[DG]{I|L}V{I|L};[H{I|L}]VTV{[DA]|[EG]}V{I|L};[{I|L}P][QP]SS{I|L}[KP];[HV]{I|L}T[DG]{I|L}V{I|L};[H{I|L}]WW{I|L}V{I|L} 3.1817;3.1198;2.808;2.4756;2.4137;2.2445;2.102;2.0609;1.9328;1.7025 -;-;-;-;-;-;-;-;-;- 515 1 1.415 54393.4 1.0 12748 5041 17778 HBL1_DMSO_200M_050219_2,17791 HBL1_DMSO_200M_050219_2,17791,LSGLLFGFI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17793 94.823 800.0 286480.0 25 0 42616.0 + 37554 TLIDLPGITKV 11 151 585.3614601793115 1168.708367425423 2 585.3618652224541 MULTI CID FTMS 0 0 0 17792 197760.09375 0.6310444878614397 2 -0.1376495361328125 1 Unmodified _TLIDLPGITKV_ ENSG00000079805|ENST00000389253|DNM2;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000079805|P50570-3|DNM2;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000197959|Q9UQ16-2|DNM3;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16|DNM3 77.04852534044906 0.0119778990295177 4 [{I|L}T]{I|L}D{I|L}PG{I|L}TKV 11 0 + 86.509 0.0 0.0 7.4021 7.4021 83.479 0.0 0.0 0.0 27.367585652254192 3.8547333961549697 3.8547333961549697 3.5071123335628585 0 1.6307196863200843 2.0 1.055462187404089 0.5269763493273799 + + [{I|L}T]{I|L}D{I|L}PG{I|L}TKV;[{I|L}T]{I|L}D{I|L}PG{I|L}KTV;[{I|L}T]{I|L}D{I|L}PG{I|L}KS{I|L};[{I|L}T]{I|L}D{I|L}V[PA]TKV;[{I|L}T]{I|L}D{I|L}V[PA]KTV;[{I|L}T]{I|L}D{I|L}V[PA]KS{I|L};[{I|L}T]{I|L}D[KA]{[TV]|[{I|L}S]}{I|L}PV;[{I|L}T]{I|L}{[TV]|[{I|L}S]}[KA]D{I|L}PV;[{I|L}T]{I|L}D[KA]{[TV]|[{I|L}S]}VP{I|L};[{I|L}T][RP]K[{M(Oxidation (M))|F}V]{I|L}PV 7.4021;7.102;7.0723;6.7554;6.4554;6.4256;3.8779;3.7147;3.2585;2.9796 +;-;-;-;-;-;-;-;-;- + 2417 + 1 1.415 173788.7 0.8899999856948853 12749 5042 17792 HBL1_DMSO_200M_050219_2,17793 HBL1_DMSO_200M_050219_2,17793,TLIDLPGITKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17794 94.837 800.0 202780.0 25 0 12320.0 + + 28793 LPYVGPSVTPMTI 13 142 687.8699641056054 1373.7253752780107 2 687.8707153201103 MULTI CID FTMS 0 0 0 17792 173608.5625 0.6180343157219521 -1 0.06036376953125 2 Unmodified _PYMIRPRPFTP_ ENST00000487440.5_1_3:47281337-47324087:-|nuORF;ENSG00000088727|ENST00000684063|KIF9;ENST00000484629.1_1_3:47307469-47316817:-|nuORF;nc|ENSG00000088727|Q9HAQ2-2|KIF9 34.40172386719151 0.2986346176549658 4 [{I|L}T]MP{I|L}GS{I|L}TPM[{I|L}T] 13 -1 + 67.931 0.0 0.0 4.945 4.945 67.516 0.0 0.0 0.0 0.0446965171998101 11.116613880713937 0.0446965171998101 0.0446965171998101 0 1.492992819099939 1.3010299956639813 1.894599018282542 0.0 [{I|L}T]MP{I|L}GS{I|L}TPM[{I|L}T];[MT]P{I|L}{I|L}GS{I|L}TPM[{I|L}T];[TP]M{I|L}{I|L}GS{I|L}TPM[{I|L}T];[{I|L}T]MP{I|L}GTVTPM[{I|L}T];[MT]P{I|L}{I|L}GTVTPM[{I|L}T];[{I|L}T]MPT[VG]{I|L}TPM[{I|L}T];[MT]P{I|L}T[VG]{I|L}TPM[{I|L}T];[TP]M{I|L}{I|L}GTVTPM[{I|L}T];[TP]M{I|L}T[VG]{I|L}TPM[{I|L}T];[{I|L}T]MP{I|L}GST{I|L}PM[{I|L}T] 4.945;4.9417;4.7125;4.5429;4.5396;4.4849;4.4817;4.3104;4.2524;4.1655 -;-;-;-;-;-;-;-;-;- 14639 1 1.415 118771.8 0.6600000262260437 12750 5042 17792 HBL1_DMSO_200M_050219_2,17794 HBL1_DMSO_200M_050219_2,17794,PYMIRPRPFTP False False LPYVGPSVTPMTI 94.837048 687.87071532011 4470421.5 17792.0 ENST00000487440.5_1_3:47281337-47324087:-|nuORF;;ENSG00000088727|ENST00000684063|KIF9;;ENST00000484629.1_1_3:47307469-47316817:-|nuORF;;nc|ENSG00000088727|Q9HAQ2-2|KIF9 5.341065406799316 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17795 94.847 559.0 306930.0 25 0 44799.0 + 23984 LVVDIMHGL 9 159 498.7807744904979 995.5469960477958 2 498.7816955447197 MULTI CID FTMS 0 0 0 17792 159391.5 0.8300707065660421 -1 0.06036376953125 3 Unmodified _LVVDIMHGL_ ENSG00000158417|ENST00000289371|EIF5B 56.541270873467816 0.0279970378729908 4 [{I|L}V]VD{I|L}MHG{I|L} 9 0 + 59.948 0.0 0.0 6.0216 6.0216 81.033 0.0 0.0 0.0 24.98725092437371 5.228787452803374 5.228787452803374 5.228787452803374 0 1.0189301784845295 2.0 0.3494850021680094 0.0 + + [{I|L}V]VD{I|L}MHG{I|L};[{I|L}V]VD{I|L}MHAV;[{I|L}V]VD{I|L}M{I|L}{[HG]|PP};[{I|L}V]VDQ[Y{I|L}]{M(Oxidation (M))|F};[{I|L}V]{I|L}[DV]MHG{I|L};[{I|L}V]VD[AG][Y{I|L}]{M(Oxidation (M))|F};[{I|L}V]V[HQ][C(Carbamidomethyl (C))K]{I|L};[{I|L}V]{I|L}[DV]MHAV;[{I|L}V]{I|L}[DV]M{I|L}{[HG]|PP};[{I|L}V]V[R{M(Oxidation (M))|F}][YT]V 6.0216;5.4964;5.2837;4.9097;4.1448;3.9793;3.6338;3.6196;3.4069;3.2827 +;-;-;-;-;-;-;-;-;- + 1477 + 1 1.415 132534.6 1.0 12751 5042 17792 HBL1_DMSO_200M_050219_2,17795 HBL1_DMSO_200M_050219_2,17795,LVVDIMHGL True True LVVDIMHGL 94.846838 498.78169554472 1414007.75 17792.0 ENSG00000158417|ENST00000289371|EIF5B 1.7845938205718994 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17796 94.861 800.0 151450.0 25 0 18142.0 + 9127 FFPEYTHQLF 10 133 664.819222722986 1327.6238925127718 2 664.8196899294853 MULTI CID FTMS 0 0 0 17792 104067.1953125 1.0 0 0.0 4 Unmodified _FFPEYTHQLF_ ENSG00000128708|ENST00000264108|HAT1 69.10491478415734 0.0189654488676922 4 [EP]Y[HT]Q{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 10 4 + 54.601 0.0 0.0 4.1127 4.1127 71.622 0.0 0.0 0.0 3.947340481202062 4.14719272753171 3.947340481202062 3.947340481202062 0 0.218765315847925 1.6989700043360187 1.0044321917401078 0.6505149978319906 [EP]Y[HT]Q{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYTHQ{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]MTYEP[Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYTHQ{M(Oxidation (M))|F}{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYTMPPS{I|L};[EP]V{M(Oxidation (M))|F}G{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}P[Y{I|L}];{[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}MTYEP[Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PEYTMPPTV;[EP][RP]Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}P[Y{I|L}];[EP]Y[RP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}P[Y{I|L}] 4.1127;3.8153;3.8003;3.6616;3.638;3.5146;3.4661;3.455;3.3892;3.3892 -;+;-;-;-;-;-;-;-;- + 4080 1 1.415 92806.1 0.5299999713897705 12752 5042 17792 HBL1_DMSO_200M_050219_2,17796 HBL1_DMSO_200M_050219_2,17796,FFPEYTHQLF True True FFPEYTHQLF 94.860675 664.819689929485 1877787.75 17792.0 ENSG00000128708|ENST00000264108|HAT1 8.734306971232096 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17797 94.875 800.0 182540.0 25 0 10496.0 + 32205 RVVDLITNLDM 11 140 644.8506745167234 1287.6867961002467 2 644.8504516482353 MULTI CID FTMS 0 0 0 17792 104183.359375 0.6926777786931202 -1 0.06036376953125 5 Unmodified _RVVDLITNLDM_ ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 49.74193281347159 0.1190592179673825 4 [{I|L}T]A[PS]{I|L}{I|L}TN{I|L}DM 12 5 + 90.46 0.0 0.0 7.025 7.025 85.548 0.0 0.0 0.0 5.92754053236898 16.611814434466183 5.92754053236898 5.92754053236898 0 1.305462187404089 1.5228787452803376 1.1237125054200234 0.3807196863200844 [{I|L}T]A[PS]{I|L}{I|L}TN{I|L}DM;[{I|L}A]T[PS]{I|L}{I|L}TN{I|L}DM;{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]{I|L}{I|L}TN{I|L}DM;[{I|L}A]{[RE]|[WV]}{I|L}{I|L}TN{I|L}DM;[{I|L}T]A[PS]{I|L}{I|L}TGG{I|L}DM;[{I|L}T]A[PS]{I|L}{I|L}TARDM;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}TN{I|L}DM;{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]{I|L}{I|L}TGG{I|L}DM;[VS]V[PS]{I|L}{I|L}TN{I|L}DM;[{I|L}A]{[RE]|[WV]}{I|L}{I|L}TGG{I|L}DM 7.025;6.5647;6.5329;6.285;6.0228;5.9904;5.9683;5.824;5.7016;5.5761 -;-;-;-;-;-;-;-;-;- 1523 1 1.415 115122.3 0.5299999713897705 12753 5042 17792 HBL1_DMSO_200M_050219_2,17797 HBL1_DMSO_200M_050219_2,17797,RVVDLITNLDM True True RVVDLITNLDM 94.874509 644.850451648235 1279940.75 17792.0 ENSG00000086758|ENST00000262854|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 7.842319965362549 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17798 94.886 686.0 272160.0 25 0 27453.0 + 9431 FLAEIFKKI 9 179 554.8418248027176 1107.6690966722351 2 554.8420898318291 MULTI CID FTMS 0 0 0 17792 97190.8515625 1.0 0 0.0 6 Unmodified _FLAEIFKKI_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 45.69961567697781 0.0497987121815769 4 {M(Oxidation (M))|F}{I|L}AE{I|L}{M(Oxidation (M))|F}KK{I|L} 9 0 + 47.081 0.0 0.0 4.2504 4.2504 79.413 0.0 0.0 0.0 10.94212497064703 9.330532103693862 9.330532103693862 9.330532103693862 0 0.8494850021680094 0.0 0.3494850021680094 0.0 + + {M(Oxidation (M))|F}{I|L}AE{I|L}{M(Oxidation (M))|F}KK{I|L};{M(Oxidation (M))|F}{I|L}AE{I|L}{M(Oxidation (M))|F}K{I|L}K;[HV]{I|L}{[VA]|[{I|L}G]}[KS]{I|L}{I|L}E;{M(Oxidation (M))|F}{I|L}{I|L}[KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L};{M(Oxidation (M))|F}{I|L}[RH][R{I|L}]{I|L}[PG];{M(Oxidation (M))|F}{I|L}{I|L}[KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}K;{M(Oxidation (M))|F}{I|L}[RH][R{I|L}]APV;KK{[YC]|[HE]}[{I|L}V]{I|L}{I|L}E;{M(Oxidation (M))|F}{I|L}[RH][R{I|L}]V[PA];{M(Oxidation (M))|F}{I|L}[RK][R{M(Oxidation (M))|F}]NK 4.2504;3.4081;2.1184;1.4682;1.4372;0.62589;0.51906;0.36838;0.24354;0.2323 +;-;-;-;-;-;-;-;-;- + 1439 + 1 1.415 144442.8 1.0 12754 5042 17792 HBL1_DMSO_200M_050219_2,17798 HBL1_DMSO_200M_050219_2,17798,FLAEIFKKI True True FLAEIFKKI 94.886446 554.842089831829 830561.25 17792.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 4.2035462856292725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17799 94.902 800.0 115960.0 25 0 10529.0 + -1 NILSGNPLL 9 124 940.9500952487174 1879.885637564235 2 940.9533569216728 MULTI CID FTMS 0 0 0 17792 91758.0625 0.8963842879412028 -1 0.06036376953125 7 ENSG00000150316|ENST00000279839|CWC15 4 [{I|L}T]{[CP]|[EA]}[VP]{I|L}V 8 -1 21.717 0.0 0.0 1.1552 0.0 0.0 0.0 1054.398925028186 1054.398925028186 3.5945309005310087 0.0 0.0 0.0 0 0.5 2.0 0.2614393726401688 0.0 [{I|L}T]{[CP]|[EA]}[VP]{I|L}V 1.1552 - 1659 1 1.415 65513.0 0.5 12755 5042 17792 HBL1_DMSO_200M_050219_2,17799 HBL1_DMSO_200M_050219_2,17799, False False NILSGNPLL 94.90175 940.953356921673 229911.234375 17792.0 ENSG00000150316|ENST00000279839|CWC15 3.1965157985687256 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17801 94.907 8.4 6885000.0 25 0 900220.0 + 14325 IEQDLLTSTDT 11 74 618.3037989932812 1234.5930450533624 2 618.3047973513603 MULTI CID FTMS 0 0 0 17800 6231181.5 0.9191000191676406 1 -0.0427398681640625 1 Unmodified _IEQDLLTSTDT_ REV__ENSG00000137145|ENST00000434457|DENND4C;REV__ENST00000602708.1_1_9:19230809-19276502:+|nuORF;REV__nc|ENSG00000137145|Q5VZ89-3|DENND4C;REV__nc|ENSG00000137145|Q5VZ89-5|DENND4C;REV__nc|ENSG00000137145|Q5VZ89|DENND4C 18.373094154950223 0.6529654022026722 4 [{I|L}A]GED{I|L}A{I|L} 8 -1 63.027 0.0 0.0 5.1051 0.0 0.0 0.0 449.1546044618187 449.1546044618187 47.64807496580993 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.9749073637206092 0.0 [{I|L}A]GED{I|L}A{I|L} 5.1051 - 656 1 1.424 49858.8 1.0 12756 5043 17800 HBL1_DMSO_200M_050219_2,17801 HBL1_DMSO_200M_050219_2,17801,IEQDLLTSTDT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17802 94.908 18.0 3889400.0 25 0 543810.0 + + 21433 RLYDGLFKVI 10 60 612.3613562178261 1222.7081595024522 2 612.3618041872978 MULTI CID FTMS 0 0 0 17800 2457418.0 0.6465045234464695 1 -0.0427398681640625 2 Unmodified _LPHEQFIKVL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 21.799462835604743 0.4789045305445478 4 G{I|L}{M(Oxidation (M))|F}KV{I|L} 6 -1 52.256 0.0 0.0 4.2738 0.0 0.0 547.2758112668845 0.0 547.2758112668845 0.0 44.29683137432591 0.0 0.0 0 1.110924374808178 0.0 0.0 0.0 G{I|L}{M(Oxidation (M))|F}KV{I|L} 4.2738 - 175 1 1.424 60568.7 1.0 12757 5043 17800 HBL1_DMSO_200M_050219_2,17802 HBL1_DMSO_200M_050219_2,17802,LPHEQFIKVL False False RLYDGLFKVI 94.907714 612.361804187298 60495036.0 17800.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 5.742823759714763 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17803 94.909 43.0 933440.0 25 0 101530.0 + -1 CWPLRLLSV 9 71 572.3230653247996 1142.631577716399 2 572.3245727419853 MULTI CID FTMS 0 0 0 17800 891481.875 0.4671855728694608 -5 0.4512405395507812 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))WPLRLLSV_ REV__ENST00000245407.7_1_5:131726498-131729479:+|nuORF 16.942295170755138 0.3780752226737986 4 [Q{I|L}]PY[NP]{I|L} 7 -1 26.928 0.0 0.0 2.3567 0.0 0.0 0.0 314.17024899281347 314.17024899281347 4.008556860707131 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.3494850021680094 [Q{I|L}]PY[NP]{I|L} 2.3567 - 100 1 1.424 37790.5 1.0 12758 5043 17800 HBL1_DMSO_200M_050219_2,17803 HBL1_DMSO_200M_050219_2,17803,CWPLRLLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17804 94.911 97.0 646490.0 25 0 54772.0 + 10151 FPWSEIRNI 9 68 581.304892109068 1160.5952312849358 2 581.3074828982353 MULTI CID FTMS 0 0 0 17800 461974.6875 0.5434295858776439 -8 0.7490158081054688 4 Unmodified _FPWSEIRNI_ ENSG00000092820|ENST00000367075|EZR;ENSG00000137710|ENST00000645495|RDX;ENSG00000147065|ENST00000360270|MSN;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX 39.94969957227396 0.0757326808254658 4 {M(Oxidation (M))|F}PWSE{I|L}[RN]{I|L} 9 0 + 58.879 0.0 0.0 5.0732 5.0732 81.779 0.0 0.0 0.0 31.43175948177209 0.4575749056067479 0.4575749056067479 9.208187539523747 0 0.7302046884880937 0.0 0.0 0.3494850021680094 + + {M(Oxidation (M))|F}PWSE{I|L}[RN]{I|L};{M(Oxidation (M))|F}P{[DA]|[EG]}SE{I|L}[RN]{I|L};{M(Oxidation (M))|F}NQQE{I|L}[RN]{I|L};{M(Oxidation (M))|F}N[YR][{I|L}P]S[HQ] 5.0732;4.2798;2.2679;1.0634 +;-;-;- + 130 + 1 1.424 53747.6 1.0 12759 5043 17800 HBL1_DMSO_200M_050219_2,17804 HBL1_DMSO_200M_050219_2,17804,FPWSEIRNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17805 94.916 246.0 287920.0 25 0 36632.0 + -1 KVFELMTSL 9 112 533.7951705409911 1065.575788148782 2 534.2946044802666 MULTI CID FTMS 0 0 0 17800 262776.0 1.0 0 0.0 5 Oxidation (M) _LVYEAIIM(Oxidation (M))V_ nc|ENSG00000092010|Q06323-3|PSME1;ENST00000560420.1_1_14:24606925-24607473:+|nuORF;nc|ENSG00000092010|Q06323-2|PSME1;ENSG00000092010|ENST00000206451|PSME1 24.67388899826682 0.2172451872415813 4 [YE]A{I|L}V{I|L} 6 -1 38.421 0.0 0.0 3.6057 0.0 0.0 0.0 374.17334606965966 374.17334606965966 2.683692563431848 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [YE]A{I|L}V{I|L} 3.6057 - 642 1 1.424 59413.8 1.0 12760 5043 17800 HBL1_DMSO_200M_050219_2,17805 HBL1_DMSO_200M_050219_2,17805,LVYEAIIMV False False KVFELMTSL 94.91565 534.294604480267 2950086.0 17800.0 nc|ENSG00000092010|Q06323-3|PSME1;;ENST00000560420.1_1_14:24606925-24607473:+|nuORF;;nc|ENSG00000092010|Q06323-2|PSME1;;ENSG00000092010|ENST00000206451|PSME1 1.9795690377553303 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17806 94.924 456.0 294750.0 25 0 29289.0 + -1 LFQIFCEGP 9 163 555.7691566653658 1109.5237603975315 2 555.7690917849541 MULTI CID FTMS 0 0 0 17800 140871.15625 1.0 0 0.0 6 Carbamidomethyl (C) _LFQIFC(Carbamidomethyl (C))EGP_ REV__CHRM3|p.P217H|1|0.14|ENSG00000133019|chr1:239908101-239908101|C/A|missense_variant;REV__ENSG00000133019|ENST00000676153|CHRM3 15.847184025352805 0.4077185912009129 4 [HV]{I|L}DVVDC(Carbamidomethyl (C))[PG] 10 -1 + 37.062 0.0 0.0 3.3403 3.3403 73.521 0.0 0.0 0.0 0.9936247538460918 12.67851293743831 0.9936247538460918 7.670333392987807 0 0.5 1.0457574905606752 0.0 0.0 [HV]{I|L}DVVDC(Carbamidomethyl (C))[PG];[TA]C(Carbamidomethyl (C))DVV[{M(Oxidation (M))|F}V]TV;[TA]C(Carbamidomethyl (C))DVV[{M(Oxidation (M))|F}V]S{I|L};[{I|L}V]HDVVDC(Carbamidomethyl (C))[PG];[HV]{I|L}DVVD[CG][PG];[{I|L}P]Q{M(Oxidation (M))|F}[HA]DE[PG];[{I|L}P]Q[QP]VDC(Carbamidomethyl (C))[PG];[{I|L}P]Q{I|L}[NP]DC(Carbamidomethyl (C))[PG];[TA]C(Carbamidomethyl (C))DVV[MT]T{I|L};[HV]VVEVDC(Carbamidomethyl (C))[PG] 3.3403;2.649;2.5887;2.5818;2.5143;2.4913;2.4913;2.431;2.4078;2.3929 -;-;-;-;-;-;-;-;-;- 1739 1 1.424 107095.3 1.0 12761 5043 17800 HBL1_DMSO_200M_050219_2,17806 HBL1_DMSO_200M_050219_2,17806,LFQIFCEGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17807 94.931 400.0 217690.0 25 0 21884.0 + 34961 SQLDSVRVWL 10 97 601.8278496740897 1201.6411464149794 2 601.8309203982353 MULTI CID FTMS 0 0 0 17800 122945.4375 0.9263799202809004 -1 0.09490966796875 7 Unmodified _SQLDSVRVWL_ ENSG00000173473|ENST00000254480|SMARCC1 63.22749603027936 0.0281198777558511 4 {[QS]|[NT]}{I|L}DSVRVW{I|L} 10 0 + 58.338 0.0 0.0 4.8549 4.8549 84.298 0.0 0.0 0.0 38.16061246681059 13.037275116073346 13.037275116073346 18.69402840463316 0 1.1677353201839438 1.0457574905606752 0.3807196863200844 0.0 + + {[QS]|[NT]}{I|L}DSVRVW{I|L};{[QS]|[NT]}{I|L}[NP][{M(Oxidation (M))|F}V]V[W{I|L}];{[QS]|[NT]}{I|L}[WD]RVW{I|L};{[QS]|[NT]}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}A]V[W{I|L}];{[QS]|[NT]}[WE]VRVW{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[QA]SVRVW{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{[QG]|[NA]}VRVW{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{[{M(Oxidation (M))|F}H]|[RQ]}RVW{I|L};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}C(Carbamidomethyl (C))RV[W{I|L}];[{I|L}T]N[NP][{M(Oxidation (M))|F}V]V[W{I|L}] 4.8549;3.2991;3.2519;3.1336;2.331;1.7539;1.1722;0.87909;0.69647;0.66335 +;-;-;-;-;-;-;-;-;- + 215 + 1 1.424 70161.5 1.0 12762 5043 17800 HBL1_DMSO_200M_050219_2,17807 HBL1_DMSO_200M_050219_2,17807,SQLDSVRVWL True True SQLDSVRVWL 94.930915 601.830920398235 1332012.75 17800.0 ENSG00000173473|ENST00000254480|SMARCC1 5.945952733357747 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17808 94.937 352.0 177860.0 25 0 10900.0 + 21327 LPFCQERLF 9 112 576.796511644364 1151.578470355528 2 577.2988159060478 MULTI CID FTMS 0 0 0 17800 122166.984375 0.5389968342750358 1 -0.0427398681640625 8 Unmodified _LPFCQERLF_ ENST00000481338.1_1_14:105182091-105185384:+|nuORF 9.38312468134398 0.5871240394367778 4 P{M(Oxidation (M))|F}MSE 5 6 21.058 0.0 0.0 1.8286 0.0 0.0 112.08056613824812 445.2558077447876 557.3363738830357 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F}MSE 1.8286 - 151 + 1 1.424 55276.1 1.0 12763 5043 17800 HBL1_DMSO_200M_050219_2,17808 HBL1_DMSO_200M_050219_2,17808,LPFCQERLF False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17809 94.944 403.0 262240.0 25 0 35508.0 + 12855 GVVIHLPGL 9 95 452.783891131781 903.553229330362 2 452.7843505740166 MULTI CID FTMS 0 0 0 17800 125733.21875 0.4919893408462208 -5 0.4512405395507812 9 Unmodified _GVVIHLPGL_ ENSG00000035687|ENST00000366535|ADSS2;ENSG00000185100|ENST00000330877|ADSS1;ENST00000557582.5_1_14:105204639-105207027:+|nuORF;ENST00000588022.1_1_17:33786947-33787550:-|nuORF;nc|ENSG00000185100|Q8N142-2|ADSS1 56.04830969593885 0.0282699710924866 4 [H{I|L}]VR{I|L} 5 6 34.513 0.0 0.0 3.8197 0.0 0.0 0.0 282.1482360044433 282.1482360044433 12.717750408754611 0.0 0.0 0.0 0 0.7614393726401688 1.0969100130080565 0.0 0.2742275032520141 [H{I|L}]VR{I|L} 3.8197 - 128 1 1.424 86045.1 1.0 12764 5043 17800 HBL1_DMSO_200M_050219_2,17809 HBL1_DMSO_200M_050219_2,17809,GVVIHLPGL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17811 94.949 20.0 2791000.0 25 0 291970.0 + 1205 AIDPHLLLSV 10 82 539.3178698332674 1076.6211867333348 2 539.3193237185478 MULTI CID FTMS 0 0 0 17810 2190616.0 0.5694048007471402 2 -0.1760406494140625 1 Unmodified _AIDPHLLLSV_ ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A 71.92227651296345 0.0188747003512554 4 [{I|L}A]DYA{I|L}{I|L}{I|L}SV 10 2 + 67.387 0.0 0.0 6.2592 6.2592 75.684 0.0 0.0 0.0 11.949237304209888 10.012262311882765 10.012262311882765 1.4916623986031396 0 1.4291746928241125 2.0 0.3252574989159953 0.0 [{I|L}A]DYA{I|L}{I|L}{I|L}SV;[{I|L}A]DY{I|L}A{I|L}{I|L}SV;[{I|L}A]DY{I|L}{I|L}A{I|L}SV;[{I|L}A][Y{I|L}]W{I|L}{I|L}W;[{I|L}A][Y{I|L}]{I|L}W{I|L}W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}W{I|L}{I|L}W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}{I|L}W{I|L}W;[{I|L}A][Y{I|L}]DA{I|L}{I|L}SV;[H{I|L}]P{I|L}W{I|L}{I|L}W;[H{I|L}]P{I|L}{I|L}W{I|L}W 6.2592;6.1206;5.6774;5.2653;5.2653;5.1493;5.1493;4.9869;4.9857;4.9857 -;-;-;-;-;-;-;-;-;- 690 1 1.424 52822.0 1.0 12765 5044 17810 HBL1_DMSO_200M_050219_2,17811 HBL1_DMSO_200M_050219_2,17811,AIDPHLLLSV True True AIDPHLLLSV 94.949277 539.319323718548 31304616.0 17810.0 ENSG00000121892|ENST00000303538|PDS5A;;nc|ENSG00000121892|Q29RF7-3|PDS5A 6.5202304522196455 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17812 94.95 27.0 1522000.0 25 0 118850.0 + 25400 NDSQLFLRSL 10 73 596.8208060302865 1191.6270591273728 2 596.8209716677666 MULTI CID FTMS 0 0 0 17810 1848204.0 0.9810562388926752 1 -0.10662841796875 2 Unmodified _NDSQLFLRSL_ REV__ENST00000578419.5_1_17:77078294-77078564:+|nuORF 11.517880264261096 0.6542831674726655 4 [DN]S{I|L}GK{I|L}PN 9 -1 44.364 0.0 0.0 3.7229 0.0 0.0 0.0 250.1193483942016 250.1193483942016 20.718421963928435 0.0 0.0 0.0 0 0.0 0.0 0.0 1.1421590589602533 [DN]S{I|L}GK{I|L}PN 3.7229 - 125 + 1 1.424 34373.9 1.0 12766 5044 17810 HBL1_DMSO_200M_050219_2,17812 HBL1_DMSO_200M_050219_2,17812,NDSQLFLRSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17813 94.953 97.0 478670.0 25 0 77082.0 + 6136 DSYPVVNLI 9 78 510.27462450926873 1018.5346960853376 2 510.2741577029228 MULTI CID FTMS 0 0 0 17810 499294.875 0.6280194284892215 5 -0.3812332153320312 3 Unmodified _DSYPVVNLI_ ENSG00000188566|ENST00000684003|NDOR1;nc|ENSG00000188566|Q9UHB4-2|NDOR1;nc|ENSG00000188566|Q9UHB4-3|NDOR1;nc|ENSG00000188566|Q9UHB4-4|NDOR1 21.74664581756881 0.2544899275067181 4 [VP]VN{I|L} 5 4 33.768 0.0 0.0 3.3153 0.0 0.0 0.0 493.19354553285626 493.19354553285626 12.685238507372745 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 + [VP]VN{I|L} 3.3153 + + 106 1 1.424 42371.5 1.0 12767 5044 17810 HBL1_DMSO_200M_050219_2,17813 HBL1_DMSO_200M_050219_2,17813,DSYPVVNLI False True DSYPVVNLI 94.952564 510.274157702923 39978648.0 17810.0 nc|ENSG00000188566|Q9UHB4-3|NDOR1;;ENSG00000188566|ENST00000684003|NDOR1;;nc|ENSG00000188566|Q9UHB4-2|NDOR1;;nc|ENSG00000188566|Q9UHB4-4|NDOR1 3.593371073404948 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17814 94.955 145.0 369220.0 25 0 44233.0 + 44448 YMLEHVITL 9 86 559.799392278521 1117.584231623842 2 559.7995483279228 MULTI CID FTMS 0 0 0 17810 246537.828125 0.6305102137291874 2 -0.1760406494140625 4 Unmodified _YMLEHVITL_ ENSG00000184445|ENST00000333479|KNTC1;ENST00000436959.7_1_12:123087118-123101977:+|nuORF 34.10243960390752 0.1078313939113124 4 T{I|L}V{M(Oxidation (M))|F}T{I|L} 6 5 45.495 0.0 0.0 4.0708 0.0 0.0 425.200638949817 0.0 425.200638949817 0.0 32.73050911392094 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 T{I|L}V{M(Oxidation (M))|F}T{I|L} 4.0708 - 297 + 1 1.424 48847.8 1.0 12768 5044 17810 HBL1_DMSO_200M_050219_2,17814 HBL1_DMSO_200M_050219_2,17814,YMLEHVITL True True YMLEHVITL 94.955485 559.799548327923 6545742.0 17810.0 ENST00000436959.7_1_12:123087118-123101977:+|nuORF;;ENSG00000184445|ENST00000333479|KNTC1 5.876660029093425 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17815 94.961 288.0 214970.0 25 0 17297.0 -1 0 70 753.382203639633 2257.124781519098 3 753.7183715701103 MULTI CID FTMS 0 0 0 17810 184485.421875 1.0 0 0.0 5 4 [NP]N{I|L}{I|L}AMT{I|L}{I|L}N 11 -1 51.305 0.0 0.0 2.273 0.0 0.0 0.0 1059.4661966111594 1059.4661966111594 27.39989345441428 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3807196863200844 [NP]N{I|L}{I|L}AMT{I|L}{I|L}N 2.273 - 587 1 1.424 53429.2 1.0 12769 5044 17810 HBL1_DMSO_200M_050219_2,17815 HBL1_DMSO_200M_050219_2,17815, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17816 94.975 800.0 177500.0 25 0 29918.0 + 32387 RYRQKRKQRQL 11 152 520.6499675134246 1558.9280731404738 3 520.6500732302666 MULTI CID FTMS 0 0 0 17810 157968.71875 0.5816472368068746 3 -0.2446441650390625 6 Unmodified _RYRQKRKQRQL_ REV__ENSG00000159450|ENST00000614923|TCHH 0.0948413911109767 0.8747004676205551 4 {I|L} 1 -1 12.474 0.0 0.0 0.80018 0.0 0.0 1427.8330241676206 0.0 1427.8330241676206 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80018 + + 165 + 1 1.424 117558.7 0.6100000143051147 12770 5044 17810 HBL1_DMSO_200M_050219_2,17816 HBL1_DMSO_200M_050219_2,17816,RYRQKRKQRQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17817 94.988 800.0 171750.0 25 0 23582.0 + 8810 EYCSMIIELV 10 147 600.2880696612991 1198.561586389398 2 600.2883178591728 MULTI CID FTMS 0 0 0 17810 145123.59375 0.4573175505385596 -1 0.0427398681640625 7 Unmodified _EYCSMIIELV_ ENST00000498159.1_1_3:157287125-157287392:+|nuORF 32.30548876998284 0.2428506522065767 4 {[QN]|[E{I|L}]|[KN]}{I|L}E 4 6 39.737 0.0 0.0 3.3154 0.0 0.0 0.0 711.28272221387 711.28272221387 10.444495524333526 0.0 0.0 0.0 0 0.0 2.0 1.305462187404089 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}E 3.3154 - 955 1 1.424 101406.1 0.6200000047683716 12771 5044 17810 HBL1_DMSO_200M_050219_2,17817 HBL1_DMSO_200M_050219_2,17817,EYCSMIIELV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17818 94.994 320.0 190930.0 25 0 29167.0 + 9238 TVFGTALNYV 10 88 542.7876668202873 1083.5607807073743 2 542.7880737185478 MULTI CID FTMS 0 0 0 17810 113328.9765625 0.3578766111110946 -2 0.1376495361328125 8 Unmodified _FGTALNYVSL_ nc|ENSG00000160285|P48449-2|LSS;nc|ENSG00000160285|P48449-3|LSS;ENSG00000160285|ENST00000397728|LSS 28.23362336080872 0.3343390635154222 4 [YN]V{I|L}S{I|L}NYV 9 7 + 39.86 0.0 0.0 3.6786 3.6786 70.671 0.0 0.0 0.0 4.142427204637478 8.256434167410738 4.142427204637478 4.208187539523756 0 1.048455006504028 1.3979400086720375 0.9247425010840048 0.3807196863200844 [YN]V{I|L}S{I|L}NYV;{[TV]|[{I|L}S]}AA{M(Oxidation (M))|F}S{I|L}NYV;[YN]V{I|L}N{[TV]|[{I|L}S]}YV;{[TV]|[{I|L}S]}AA{M(Oxidation (M))|F}N{[TV]|[{I|L}S]}YV;[{I|L}T]Q{M(Oxidation (M))|F}S{I|L}NYV;[YN]V{I|L}GG{[TV]|[{I|L}S]}YV;[{I|L}T]Q{M(Oxidation (M))|F}N{[TV]|[{I|L}S]}YV;[{I|L}A]{[SA]|[TG]}{M(Oxidation (M))|F}S{I|L}NYV;[{I|L}T][AG]{M(Oxidation (M))|F}S{I|L}NYV;[{I|L}A]{[SA]|[TG]}{M(Oxidation (M))|F}N{[TV]|[{I|L}S]}YV 3.6786;3.2903;3.1689;2.7805;2.7448;2.3191;2.235;1.9806;1.895;1.4708 -;-;-;-;-;-;-;-;-;- 806 1 1.424 58587.7 1.0 12772 5044 17810 HBL1_DMSO_200M_050219_2,17818 HBL1_DMSO_200M_050219_2,17818,FGTALNYVSL False True TVFGTALNYV 94.994262 542.788073718548 2561685.75 17810.0 nc|ENSG00000160285|P48449-2|LSS;;nc|ENSG00000160285|P48449-3|LSS;;ENSG00000160285|ENST00000397728|LSS 5.904759248097737 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17819 95.008 800.0 89093.0 25 0 8378.2 -1 0 115 936.4355964321728 1870.8566399311453 2 936.9371215701104 MULTI CID FTMS 0 0 0 17810 99765.2578125 0.7608836555154198 -5 0.3846969604492187 9 4 VS{I|L} 3 -1 20.423 0.0 0.0 1.0916 0.0 0.0 1553.6618900305575 0.0 1553.6618900305575 0.0 -1.6653390865984612 -1.6653390865984612 0.0 0 0.0 0.0 0.2887254899964357 0.0 VS{I|L} 1.0916 - 1126 + 1 1.424 53741.9 0.5400000214576721 12773 5044 17810 HBL1_DMSO_200M_050219_2,17819 HBL1_DMSO_200M_050219_2,17819, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17820 95.022 800.0 128530.0 25 0 9667.7 20859 LMHCVGFESIL 11 120 624.8092058557472 1247.6038587782944 2 624.8093749880791 MULTI CID FTMS 0 0 0 17810 86566.0 0.401250983351075 -5 0.3846969604492187 10 Unmodified _LMHCVGFESIL_ ENSG00000178177|ENST00000635767|LCORL;nc|ENSG00000178177|Q8N3X6-3|LCORL;nc|ENSG00000178177|Q8N3X6|LCORL 25.399314129420983 0.4958189927824775 4 AP{M(Oxidation (M))|F}K{I|L}{I|L}{I|L} 7 8 51.859 0.0 0.0 4.1567 0.0 0.0 447.0889759748063 0.0 447.0889759748063 0.0 25.82850421621579 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.0 AP{M(Oxidation (M))|F}K{I|L}{I|L}{I|L} 4.1567 - 359 1 1.424 89100.3 0.5199999809265137 12774 5044 17810 HBL1_DMSO_200M_050219_2,17820 HBL1_DMSO_200M_050219_2,17820,LMHCVGFESIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17821 95.037 800.0 108190.0 25 0 7670.8 -1 0 113 1011.9903032766996 2021.9660536201989 2 1012.494982898235 MULTI CID FTMS 0 0 0 17810 86795.5078125 0.9896141432786104 -3 0.1980133056640625 11 4 [YE]{I|L}N{I|L}DV{M(Oxidation (M))|F}[HQ]MNN 13 -1 66.551 0.0 0.0 3.2914 0.0 0.0 0.0 401.1795295325614 401.1795295325614 46.510630790460624 0.0 0.0 0.0 0 0.9749073637206092 1.3010299956639813 0.2614393726401688 0.9163865622122672 [YE]{I|L}N{I|L}DV{M(Oxidation (M))|F}[HQ]MNN 3.2914 - 3242 1 1.424 61122.3 0.550000011920929 12775 5044 17810 HBL1_DMSO_200M_050219_2,17821 HBL1_DMSO_200M_050219_2,17821, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17822 95.051 800.0 192340.0 25 0 87788.0 -1 0 94 1055.6278830855888 0 1055.626879870892 PEAK CID FTMS 0 0 0 17810 87037.1640625 0.8790475653930654 1 -0.10662841796875 12 4 VT{M(Oxidation (M))|F} 3 -1 16.159 0.0 0.0 0.76609 0.0 0.0 1462.944351520984 296.08933435611567 1759.0336858770995 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 VT{M(Oxidation (M))|F} 0.76609 - 128 + 1 1.424 103248.8 0.5699999928474426 12776 5044 17810 HBL1_DMSO_200M_050219_2,17822 HBL1_DMSO_200M_050219_2,17822, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17824 95.056 27.0 1794300.0 25 0 196090.0 + 40612 VLAMKAQPVV 10 66 528.3179820745974 0 528.3180419802666 PEAK CID FTMS 0 0 0 17823 1491888.75 0.6950174897049846 1 -0.0694122314453125 1 Unmodified _VLAMKAQPVV_ REV__ENSG00000074755|ENST00000381638|ZZEF1;REV__ENST00000570365.1_1_17:3970518-3976036:-|nuORF 15.847184025352805 0.3304572136216667 4 V{I|L}{I|L}{I|L} 4 -1 24.909 0.0 0.0 2.3619 0.0 0.0 117.08089715525088 496.2019442193969 613.2828413746478 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 V{I|L}{I|L}{I|L} 2.3619 - 70 + 1 1.437 46601.6 1.0 12777 5045 17823 HBL1_DMSO_200M_050219_2,17824 HBL1_DMSO_200M_050219_2,17824,VLAMKAQPVV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17825 95.057 46.0 1567800.0 25 0 154550.0 + 11775 GLLAVLRPL 9 63 476.3211709827705 950.6277890323412 2 476.3212768435478 MULTI CID FTMS 0 0 0 17823 1456756.0 1.0 0 0.0 2 Unmodified _GLLAVLRPL_ ENSG00000168569|ENST00000307366|TMEM223 42.09456458481378 0.0639583784996157 4 {[VA]|[{I|L}G]}{I|L}AV{I|L}{I|L}[RP] 9 2 + 71.405 0.0 0.0 7.5113 7.5113 82.779 0.0 0.0 0.0 51.28144697160131 4.985287152449232 4.985287152449232 3.0102999566398125 0 1.305462187404089 2.0 0.0 0.4247425010840047 {[VA]|[{I|L}G]}{I|L}AV{I|L}{I|L}[RP];{[VA]|[{I|L}G]}{I|L}A{I|L}V{I|L}[RP];{[VA]|[{I|L}G]}{I|L}{I|L}G{I|L}{I|L}[RP];{[VA]|[{I|L}G]}{I|L}{I|L}AV{I|L}[RP] 7.5113;7.1947;7.1363;6.8197 -;-;-;- 270 + 1 1.437 60487.7 1.0 12778 5045 17823 HBL1_DMSO_200M_050219_2,17825 HBL1_DMSO_200M_050219_2,17825,GLLAVLRPL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17826 95.059 52.0 1310400.0 25 0 329370.0 + 13851 HVIDLDDATFL 11 59 629.8190332109518 1257.6235134887036 2 629.8195678591728 MULTI CID FTMS 0 0 0 17823 1161802.375 0.983384783954474 1 -0.0694122314453125 3 Unmodified _HVIDLDDATFL_ ENSG00000152219|ENST00000282032|ARL14EP 56.17704186161178 0.0846604386095034 4 [HV]{I|L}D{I|L}DDAT{M(Oxidation (M))|F}{I|L} 11 0 + 80.635 0.0 0.0 6.4117 6.4117 91.402 0.0 0.0 0.0 21.09122312673765 67.14056395798838 21.09122312673765 24.75895023531385 0 0.718765315847925 1.5228787452803376 0.9247425010840048 0.0 + + [HV]{I|L}D{I|L}DDAT{M(Oxidation (M))|F}{I|L};[HV]{I|L}D{I|L}D{[SA]|[TG]}E{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}T][WH]HVAT{M(Oxidation (M))|F}{I|L};[PG]D[RP]{[VA]|[{I|L}G]}WT{M(Oxidation (M))|F}{I|L} 6.4117;4.443;1.3335;1.0453 +;-;-;- + 391 1 1.437 58578.2 1.0 12779 5045 17823 HBL1_DMSO_200M_050219_2,17826 HBL1_DMSO_200M_050219_2,17826,HVIDLDDATFL True True HVIDLDDATFL 95.058553 629.819567859173 20961050.0 17823.0 ENSG00000152219|ENST00000282032|ARL14EP 6.870749632517497 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17827 95.061 130.0 421540.0 25 0 54498.0 + 26537 NVIETISSL 9 85 488.2712697808642 974.5279866285284 2 488.2715637087822 MULTI CID FTMS 0 0 0 17823 458757.75 1.0 0 0.0 4 Unmodified _NVIETISSL_ ENSG00000089154|ENST00000300648|GCN1 43.85829265575387 0.0542763391141878 4 {[NV]|[RG]}{I|L}ET{I|L}SS{I|L} 9 0 {[NV]|[RG]}{I|L}ET{I|L} + + 22.792 27.0 4.0336 2.3387 2.3387 44.911 0.0 0.0 0.0 0.0 -8.812281309285623 -8.812281309285623 0.0 0 0.0 0.0 0.6109243748081782 0.0 + + {[NV]|[RG]}{I|L}ET{I|L}SS{I|L} 2.3387 + + 269 + 1 1.437 46224.5 1.0 12780 5045 17823 HBL1_DMSO_200M_050219_2,17827 HBL1_DMSO_200M_050219_2,17827,NVIETISSL True True NVIETISSL 95.061203 488.271563708782 3378315.0 17823.0 ENSG00000089154|ENST00000300648|GCN1 6.506895065307617 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17828 95.063 74.0 743300.0 25 0 129060.0 + 35422 STIVQVLEV 9 93 494.2885863153948 986.5626196975896 2 494.2889282107353 MULTI CID FTMS 0 0 0 17823 440978.6875 1.0 0 0.0 5 Unmodified _STIVQVLEV_ ENSG00000142207|ENST00000382751|URB1 49.93300154707207 0.0405168250806675 4 VQVSPV 6 5 40.5 0.0 0.0 4.1051 0.0 0.0 359.20283073450213 0.0 359.20283073450213 0.0 24.441811241770125 0.0 0.0 0 0.2887254899964357 0.0 1.1237125054200234 0.0 VQVSPV 4.1051 - 287 + 1 1.437 50597.5 1.0 12781 5045 17823 HBL1_DMSO_200M_050219_2,17828 HBL1_DMSO_200M_050219_2,17828,STIVQVLEV True True STIVQVLEV 95.062918 494.288928210735 2504352.0 17823.0 ENSG00000142207|ENST00000382751|URB1 2.5324714382489524 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17829 95.065 109.0 716930.0 25 0 70328.0 + 33860 SLFAGGMLRV 10 85 525.790754540338 1049.5669561474758 2 525.7924682497978 MULTI CID FTMS 0 0 0 17823 390124.34375 1.0 0 0.0 6 Unmodified _SLFAGGMLRV_ ENSG00000184840|ENST00000332598|TMED9;ENST00000513799.5_1_5:177019550-177022414:+|nuORF 26.268140514670165 0.3785003716575977 4 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}AGGM 7 3 56.748 0.0 0.0 5.4068 0.0 0.0 0.0 383.24033533267817 383.24033533267817 42.26761903387888 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}AGGM 5.4068 + + 286 + 1 1.437 63690.4 1.0 12782 5045 17823 HBL1_DMSO_200M_050219_2,17829 HBL1_DMSO_200M_050219_2,17829,SLFAGGMLRV False True SLFAGGMLRV 95.065226 525.792468249798 3084616.0 17823.0 ENSG00000184840|ENST00000332598|TMED9;;ENST00000513799.5_1_5:177019550-177022414:+|nuORF 4.622105201085408 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17830 95.068 153.0 391340.0 25 0 48401.0 + 35689 SVFKDFYEL 9 90 574.2865652656338 1146.5585775980676 2 574.2874023318291 MULTI CID FTMS 0 0 0 17823 269205.5625 0.648840394240124 -2 0.1493682861328125 7 Unmodified _SVFKDFYEL_ ENSG00000100994|ENST00000216962|PYGB 16.149105407346934 0.3995459350917656 4 EY{M(Oxidation (M))|F}WSV 6 8 31.261 0.0 0.0 2.7265 0.0 0.0 317.1937996869778 0.0 317.1937996869778 0.0 2.654955574145852 0.0 0.0 0 0.0 0.0 1.1989700043360187 0.0 EY{M(Oxidation (M))|F}WSV 2.7265 - 441 + 1 1.437 50349.9 1.0 12783 5045 17823 HBL1_DMSO_200M_050219_2,17830 HBL1_DMSO_200M_050219_2,17830,SVFKDFYEL False True SVFKDFYEL 95.06827 574.2886 3407763.5 17823.0 ENSG00000100994|ENST00000216962|PYGB 4.0914387702941895 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17831 95.073 269.0 365070.0 25 0 34629.0 + 35786 SVIPVINKIDL 11 101 605.8737144040244 1209.7328758748488 2 605.8740112185478 MULTI CID FTMS 0 0 0 17823 262351.625 0.557217149268385 -3 0.2442779541015625 8 Unmodified _SVIPVINKIDL_ ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF 59.05245873256422 0.0729907235015292 4 [VS]{I|L}PV{I|L}N[K{I|L}]D{I|L} 11 0 + 87.19 0.0 0.0 7.2074 7.2074 88.917 0.0 0.0 0.0 26.9193800377178 12.060323256818208 12.060323256818208 9.128498242810991 0 1.3807196863200843 1.6989700043360187 0.9634679910804403 0.3807196863200844 + + [VS]{I|L}PV{I|L}N[K{I|L}]D{I|L};[VS]{I|L}PV{I|L}GG[K{I|L}]D{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}V{M(Oxidation (M))|F}VP{I|L}[PA];{[QN]|[E{I|L}]|[KN]}{I|L}[{M(Oxidation (M))|F}V]{I|L}VP{I|L}[PA];{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}VP[{M(Oxidation (M))|F}V]{I|L}[PA];{[QN]|[E{I|L}]|[KN]}{I|L}[VP]{I|L}[{M(Oxidation (M))|F}V]{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}V{M(Oxidation (M))|F}VP{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}K[{M(Oxidation (M))|F}V]{I|L}VP{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}K{I|L}VP[{M(Oxidation (M))|F}V]{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}K[VP]{I|L}[{M(Oxidation (M))|F}V]{I|L}[PA] 7.2074;6.4528;5.1721;5.0872;4.4087;4.2936;4.2679;3.9142;3.1897;3.0747 +;-;-;-;-;-;-;-;-;- + 896 + 1 1.437 73425.1 1.0 12784 5045 17823 HBL1_DMSO_200M_050219_2,17831 HBL1_DMSO_200M_050219_2,17831,SVIPVINKIDL True True SVIPVINKIDL 95.073257 605.874011218548 10064323.0 17823.0 ENST00000506793.5_1_4:44680541-44700695:+|nuORF;;ENSG00000151806|ENST00000281543|GUF1 5.456081072489421 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17832 95.077 221.0 375120.0 25 0 25869.0 + 39001 TVRELFEEL 9 90 568.3034397570207 1134.5923265808412 2 568.3040038943291 MULTI CID FTMS 0 0 0 17823 244833.15625 0.5871140756929576 -2 0.1493682861328125 9 Unmodified _TVRELFEEL_ ENSG00000150990|ENST00000308736|DHX37 51.41523569358685 0.0372669606867193 4 {[TV]|[{I|L}S]}RE{I|L}{M(Oxidation (M))|F}EE{I|L} 9 0 + 76.653 0.0 0.0 6.756 6.756 80.557 0.0 0.0 0.0 15.88599303722674 16.478174818886373 15.88599303722674 3.0102999566398125 0 1.110924374808178 1.5228787452803376 0.3494850021680094 0.4247425010840047 + + {[TV]|[{I|L}S]}RE{I|L}{M(Oxidation (M))|F}EE{I|L};{[TV]|[{I|L}S]}RE{M(Oxidation (M))|F}{I|L}EE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{I|L}{M(Oxidation (M))|F}EE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{M(Oxidation (M))|F}{I|L}EE{I|L};{[ET]|[MV]}[RV]{I|L}{M(Oxidation (M))|F}EE{I|L};[{I|L}T][RD]{I|L}{M(Oxidation (M))|F}EE{I|L};{[TV]|[{I|L}S]}RE{I|L}EE{M(Oxidation (M))|F}{I|L};{[ET]|[MV]}[RV]{M(Oxidation (M))|F}{I|L}EE{I|L};[{I|L}T][RD]{M(Oxidation (M))|F}{I|L}EE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{I|L}{M(Oxidation (M))|F}[NG]S{I|L} 6.756;6.4907;5.3559;5.0906;4.4132;4.3429;4.2996;4.1479;4.0776;3.6448 +;-;-;-;-;-;-;-;-;- + 538 1 1.437 66496.6 1.0 12785 5045 17823 HBL1_DMSO_200M_050219_2,17832 HBL1_DMSO_200M_050219_2,17832,TVRELFEEL True True TVRELFEEL 95.077434 568.304003894329 6500469.0 17823.0 ENSG00000150990|ENST00000308736|DHX37 6.232467969258626 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17833 95.082 242.0 299050.0 25 0 26016.0 + 28843 QAFVQRVQYC 10 109 621.3066856125811 1240.598818291962 2 621.3080322146416 MULTI CID FTMS 0 0 0 17823 236361.5 0.795106974487214 3 -0.1953125 10 Unmodified _QAFVQRVQYC_ REV__ENSG00000083642|ENST00000315596|PDS5B;REV__nc|ENSG00000083642|Q9NTI5-2|PDS5B 9.38312468134398 0.6832340498775793 4 [QA]{M(Oxidation (M))|F} 3 -1 31.968 0.0 0.0 2.5768 0.0 0.0 0.0 891.4119951320589 891.4119951320589 8.602934034163003 0.0 0.0 0.0 0 0.805462187404089 0.9208187539523752 0.0 0.4247425010840047 [QA]{M(Oxidation (M))|F} 2.5768 + + 853 1 1.437 58731.9 1.0 12786 5045 17823 HBL1_DMSO_200M_050219_2,17833 HBL1_DMSO_200M_050219_2,17833,QAFVQRVQYC False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17834 95.094 691.0 211300.0 25 0 27202.0 + 28659 PVLPLPAL 8 109 410.2705822881041 818.5266116430082 2 410.2704650759697 MULTI CID FTMS 0 0 0 17823 200351.484375 0.7203554177995638 -2 0.1493682861328125 11 Unmodified _PVLPLPAL_ chr2:230221784-230225535|39|15.72|0.43|5.19|-|ENST00000540870|SP110,SP110;ENSG00000135899|ENST00000258381|SP110;ENST00000486146.2_1_2:231068050-231077551:-|nuORF;nc|ENSG00000135899|Q9HB58-3|SP110;nc|ENSG00000135899|Q9HB58-5|SP110;nc|ENSG00000135899|Q9HB58-7|SP110;nc|ENSG00000135899|Q9HB58|SP110 52.33426049586781 0.1282678332820461 4 [{I|L}P]PV{I|L}PA{I|L} 8 2 + 49.034 0.0 0.0 5.9905 5.9905 75.233 0.0 0.0 0.0 13.521825181113629 12.607215860603702 12.607215860603702 1.7609125905568137 0 0.7429928190999391 1.5228787452803376 0.0 0.0 [{I|L}P]PV{I|L}PA{I|L};[{I|L}P]VP{I|L}PA{I|L};[{I|L}P]P{I|L}VPA{I|L};[{I|L}P]PV[PA]{I|L}{I|L};[{I|L}P]VP[PA]{I|L}{I|L};[{I|L}P]P{I|L}[PG]{I|L}{I|L};[VP]{I|L}P{I|L}PA{I|L};[VP]{I|L}P[PA]{I|L}{I|L};{[HG]|PP}{I|L}V{I|L}PA{I|L};{[HG]|PP}{I|L}{I|L}VPA{I|L} 5.9905;5.7754;5.6227;4.715;4.4999;4.3472;4.3385;3.063;2.9642;2.5964 -;-;-;-;-;-;+;-;-;- + 147 1 1.437 114388.1 1.0 12787 5045 17823 HBL1_DMSO_200M_050219_2,17834 HBL1_DMSO_200M_050219_2,17834,PVLPLPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17835 95.1 331.0 353760.0 25 0 43276.0 + 24247 MAPLALHLL 9 125 497.7915811593271 993.568609385454 2 497.7912170290947 MULTI CID FTMS 0 0 0 17823 193979.4375 0.5859225492144993 -3 0.2442779541015625 12 Oxidation (M) _M(Oxidation (M))APLALHLL_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1 56.04830969593885 0.0282699710924866 4 {[MS]|[{M(Oxidation (M))|F}A]}P{I|L}A{I|L}H{I|L}{I|L} 9 0 + 56.18 0.0 0.0 5.6543 5.6543 74.489 0.0 0.0 0.0 18.2434954205279 8.601292910313347 8.601292910313347 2.04119982655925 0 1.0138793319624575 2.0 0.0 0.0 + + {[MS]|[{M(Oxidation (M))|F}A]}P{I|L}A{I|L}H{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}A{I|L}{I|L}H{I|L};H[YK]A{I|L}H{I|L}{I|L};[{I|L}P]E{I|L}{I|L}{I|L}PAE;H[YK]A{I|L}{I|L}H{I|L};H{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KS]{I|L}H{I|L} 5.6543;5.4489;2.8009;2.6661;2.5955;1.0112 +;-;-;-;-;- + 535 + 1 1.437 92326.6 1.0 12788 5045 17823 HBL1_DMSO_200M_050219_2,17835 HBL1_DMSO_200M_050219_2,17835,MAPLALHLL True False MAPLALHLL 95.099962 497.791217029095 4059169.25 17823.0 ENSG00000104951|ENST00000391826|IL4I1;;chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1 5.590192159016927 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17836 95.104 232.0 369160.0 25 0 55289.0 11239 GEQRRRLL 8 107 514.3083532486448 1026.6021535640896 2 514.3093749880791 MULTI CID FTMS 0 0 0 17823 197758.765625 1.0 0 0.0 13 Unmodified _GEQRRRLL_ ENST00000379937.6_3_14:105695225-105767012:-|nuORF;ENST00000548421.2_1_14:105722813-105767174:-|nuORF 18.13498045792455 0.6430038125133779 4 {[DA]|[EG]}V{I|L}R{I|L}VE{I|L} 9 5 + 56.493 0.0 0.0 5.503 5.503 73.24 0.0 0.0 0.0 13.908555305749315 16.478174818886373 13.908555305749315 1.7609125905568137 0 1.3182503180159344 1.5228787452803376 0.0 0.0 {[DA]|[EG]}V{I|L}R{I|L}VE{I|L};{[DA]|[EG]}V{I|L}R{I|L}EV{I|L};{[DA]|[EG]}V{I|L}RE{I|L}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{I|L}R{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{I|L}R{I|L}EV{I|L};{[QN]|[E{I|L}]|[KN]}RR{I|L}VE{I|L};{[VA]|[{I|L}G]}D{I|L}R{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}RR{I|L}EV{I|L};{[QN]|[E{I|L}]|[KN]}A[Q{I|L}]{I|L}VE{I|L};{[VA]|[{I|L}G]}D{I|L}R{I|L}EV{I|L} 5.503;5.3314;4.6506;4.1481;3.9766;3.9477;3.843;3.7761;3.6822;3.6715 -;-;-;-;-;-;-;-;-;- 507 1 1.437 71156.9 1.0 12789 5045 17823 HBL1_DMSO_200M_050219_2,17836 HBL1_DMSO_200M_050219_2,17836,GEQRRRLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17837 95.109 241.0 303010.0 25 0 71318.0 23844 LVHELDLLL 9 103 532.8214921943902 1063.6284314555803 2 532.8217040896416 MULTI CID FTMS 0 0 0 17823 150924.21875 0.7406134321681779 -1 0.10662841796875 14 Unmodified _LVHELDLLL_ ENST00000512809.5_1_4:142142137-142143592:+|nuORF;ENST00000514826.5_1_4:142142095-142142209:+|nuORF 38.15118350030904 0.0856056900103839 4 [{I|L}V]T{[ET]|[MV]}Y{I|L}{I|L}{I|L} 9 3 + 56.493 0.0 0.0 5.3113 5.3113 71.083 0.0 0.0 0.0 1.0914446942506828 16.478174818886373 1.0914446942506828 1.0914446942506828 0 0.9247425010840048 1.6989700043360187 0.7614393726401688 0.0 [{I|L}V]T{[ET]|[MV]}Y{I|L}{I|L}{I|L};{I|L}{I|L}S{[ET]|[MV]}Y{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}{[ET]|[MV]}Y{I|L}{I|L}{I|L};[{I|L}A]{[YC]|[HE]}[KQ]{I|L}{I|L}{I|L};[KQ]{[WT]|[RM]}Y{I|L}{I|L}{I|L};[{I|L}A]{[YC]|[HE]}{I|L}[KQ]{I|L}{I|L};[YT][VS][KQ]{I|L}{I|L}{I|L};[KA]G{[WT]|[RM]}Y{I|L}{I|L}{I|L};[Y{I|L}]{[CA]|SS}[KQ]{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[Y{M(Oxidation (M))|F}][VP]{I|L}{I|L}{I|L} 5.3113;5.2087;4.626;4.4786;4.3455;3.8376;3.8058;3.7978;3.6403;3.3662 -;-;-;-;-;-;-;-;-;- 581 1 1.437 62095.9 1.0 12790 5045 17823 HBL1_DMSO_200M_050219_2,17837 HBL1_DMSO_200M_050219_2,17837,LVHELDLLL True True KQSSLYILI 95.108836 532.821704089642 1658188.875 17823.0 nc|ENSG00000067445|Q12816-3|TRO;;nc|ENSG00000067445|Q12816-2|TRO;;nc|ENSG00000067445|Q12816-4|TRO;;nc|ENSG00000067445|Q12816-5|TRO;;ENST00000492706.5_1_X:54951111-54953173:+|nuORF;;ENSG00000067445|ENST00000173898|TRO 2.355317672093709 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17838 95.116 316.0 287870.0 25 0 38967.0 + 5733 DPLVPPQLTI 10 128 546.8190938530392 1091.6236347728784 2 546.8185302615166 MULTI CID FTMS 0 0 0 17823 151557.265625 0.4208200947580752 6 -0.5011138916015625 15 Unmodified _DPLVPPQLTI_ ENSG00000023228|ENST00000233190|NDUFS1;nc|ENSG00000023228|P28331-2|NDUFS1;nc|ENSG00000023228|P28331-3|NDUFS1;nc|ENSG00000023228|P28331-4|NDUFS1;nc|ENSG00000023228|P28331-5|NDUFS1 55.50274090549119 0.048383292844968 4 {NN|[MP]|[D{I|L}]|[EV]}PVPPQ{I|L}T{I|L} 10 2 + 47.942 0.0 0.0 4.3918 4.3918 72.38 0.0 0.0 0.0 3.679767852945943 7.626656038284452 3.679767852945943 3.679767852945943 0 1.274227503252014 1.3010299956639813 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}PVPPQ{I|L}T{I|L};[DP]{I|L}VPPQ{I|L}T{I|L};[{I|L}P]DVPPQ{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}PVPP[AG]{I|L}T{I|L};[DP]{I|L}VPP[AG]{I|L}T{I|L};[{I|L}P]DVPP[AG]{I|L}T{I|L};[VP]EVPPQ{I|L}T{I|L};[DP]V{I|L}PPQ{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}P[QP][VP]{I|L}T{I|L};[VP]EVPP[AG]{I|L}T{I|L} 4.3918;4.0547;3.6533;3.5522;3.2151;2.8137;2.7856;2.7519;2.2143;1.9461 -;+;-;-;-;-;-;-;-;- + 1515 1 1.437 74407.6 1.0 12791 5045 17823 HBL1_DMSO_200M_050219_2,17838 HBL1_DMSO_200M_050219_2,17838,DPLVPPQLTI True True DPLVPPQLTI 95.115774 546.818530261517 19570893.0 17823.0 ENSG00000023228|ENST00000233190|NDUFS1;;nc|ENSG00000023228|P28331-5|NDUFS1;;nc|ENSG00000023228|P28331-4|NDUFS1;;nc|ENSG00000023228|P28331-2|NDUFS1;;nc|ENSG00000023228|P28331-3|NDUFS1 5.641434669494629 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17839 95.121 256.0 245320.0 25 0 31645.0 34122 SLLRGVLYI 9 90 517.323503408347 1032.632453883494 2 517.3245727419853 MULTI CID FTMS 0 0 0 17823 120894.21875 1.0 0 0.0 16 Unmodified _SLLRGVLYI_ ENSG00000197790|ENST00000360213|OR52M1 18.1463463914782 0.3454829746528889 4 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}VY{I|L} 9 3 + 57.584 0.0 0.0 5.5764 5.5764 85.737 0.0 0.0 0.0 11.663314217665253 16.478174818886373 11.663314217665253 11.663314217665253 0 0.8252574989159953 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}VY{I|L};[TP][KT]V{I|L}VY{I|L};[TP]{I|L}[KS]{I|L}VY{I|L};[{I|L}T]{[NV]|[RG]}V{I|L}VY{I|L};[{I|L}T]P[KS]{I|L}VY{I|L};[{I|L}T]RR{I|L}VY{I|L};{[VA]|[{I|L}G]}G{[TV]|[{I|L}S]}V{I|L}VY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}V{I|L}VY{I|L} 5.5764;4.447;4.447;4.296;4.296;4.1307;4.0173;3.8102 -;-;-;-;-;-;-;- 395 1 1.437 57259.0 1.0 12792 5045 17823 HBL1_DMSO_200M_050219_2,17839 HBL1_DMSO_200M_050219_2,17839,SLLRGVLYI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17841 95.137 800.0 117490.0 25 0 6314.2 -1 MLVYVYFPLTL 11 129 687.8699641056054 1373.7253752780107 2 688.3733398318291 MULTI CID FTMS 0 0 0 17840 50705.0078125 0.2411417866256064 3 -0.2051925659179687 1 Oxidation (M) _M(Oxidation (M))LVYVYFPLTL_ ENST00000581310.5_1_18:51883493-51884258:-|nuORF 20.453626601364224 0.6096880269572111 4 [{I|L}P]YRPSVT{NN|[MP]|[D{I|L}]|[EV]}T{I|L} 12 -1 + 42.736 0.0 0.0 3.1109 3.1109 62.238 0.0 0.0 0.0 0.4785892603101018 9.889465451849093 0.4785892603101018 0.4785892603101018 0 1.242992819099939 1.2218487496163564 0.6549471895720985 0.4247425010840047 [{I|L}P]YRPSVT{NN|[MP]|[D{I|L}]|[EV]}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}[{I|L}A]WT{NN|[MP]|[D{I|L}]|[EV]}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}{[SA]|[TG]}{I|L}VT{NN|[MP]|[D{I|L}]|[EV]}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}[{I|L}A]SVT{NN|[MP]|[D{I|L}]|[EV]}T{I|L};[{I|L}P]YRPWT{NN|[MP]|[D{I|L}]|[EV]}T{I|L};[{I|L}P]YVGPSVT{NN|[MP]|[D{I|L}]|[EV]}T{I|L};[{I|L}P]YRPSS{I|L}{NN|[MP]|[D{I|L}]|[EV]}T{I|L};[{I|L}P]YS[RP]VT{NN|[MP]|[D{I|L}]|[EV]}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}{[SA]|[TG]}{I|L}S{I|L}{NN|[MP]|[D{I|L}]|[EV]}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}[{I|L}A]SS{I|L}{NN|[MP]|[D{I|L}]|[EV]}T{I|L} 3.1109;3.0761;3.0508;3.0508;2.9388;2.7764;2.7129;2.6931;2.6528;2.6528 -;-;-;-;-;-;-;-;-;- 2114 1 1.437 73388.2 0.5699999928474426 12793 5046 17840 HBL1_DMSO_200M_050219_2,17841 HBL1_DMSO_200M_050219_2,17841,MLVYVYFPLTL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17842 95.139 82.0 770180.0 25 0 87762.0 + 39553 VAYQHAFLYI 10 89 612.8245625550096 1223.6345721768191 2 612.8246337771416 MULTI CID FTMS 0 0 0 17840 388683.0 0.9235213315255728 1 -0.068603515625 2 Unmodified _VAYQHAFLYI_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000452600.1_1_2:130987586-130988813:+|nuORF;ENST00000477976.5_1_1:880076-889593:-|nuORF 25.399314129420983 0.3980215340001851 4 [Y{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V{M(Oxidation (M))|F}{I|L}Y{I|L} 9 5 + 31.533 0.0 0.0 2.577 2.577 66.175 0.0 0.0 0.0 3.467874862246564 1.933115814076345 1.933115814076345 3.0102999566398125 0 0.7429928190999391 1.6989700043360187 0.0 0.0 [Y{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V{M(Oxidation (M))|F}{I|L}Y{I|L};[Y{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}V{I|L}Y{I|L};[HA]{M(Oxidation (M))|F}[SG]{M(Oxidation (M))|F}{I|L}G{I|L}Y{I|L};[HA][YQ]{M(Oxidation (M))|F}{I|L}G{I|L}Y{I|L};[HA]{M(Oxidation (M))|F}[SG]VA{M(Oxidation (M))|F}{I|L}Y{I|L};[HA]{M(Oxidation (M))|F}[SG]{M(Oxidation (M))|F}AV{I|L}Y{I|L};[Y{I|L}]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}VY{I|L};[HA][YQ]VA{M(Oxidation (M))|F}{I|L}Y{I|L};[HA][YQ]{M(Oxidation (M))|F}AV{I|L}Y{I|L};[HA]{M(Oxidation (M))|F}[SG]AV{M(Oxidation (M))|F}{I|L}Y{I|L} 2.577;2.331;2.0511;1.9036;1.8051;1.8051;1.695;1.6576;1.6576;1.6238 -;-;-;-;-;-;-;-;-;- 478 1 1.437 51424.5 1.0 12794 5046 17840 HBL1_DMSO_200M_050219_2,17842 HBL1_DMSO_200M_050219_2,17842,VAYQHAFLYI False True VAYQHAFLYI 95.138773 612.824633777142 3787045.0 17840.0 ENSG00000188976|ENST00000327044|NOC2L;;ENST00000452600.1_1_2:130987586-130988813:+|nuORF;;ENST00000477976.5_1_1:880076-889593:-|nuORF 2.840489069620768 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17843 95.142 156.0 564060.0 25 0 72457.0 27193 PGGPAGQA 8 97 327.66345707613283 653.3123612190657 2 327.6631957888603 MULTI CID FTMS 0 0 0 17840 270744.625 0.5878437417349796 -1 0.0694122314453125 3 Unmodified _PGGPAGQA_ ENST00000288774.7_1_1:2336406-2336715:-|nuORF 0.0 0.8243325171867699 4 G 1 7 9.8329 0.0 0.0 1.5051 0.0 0.0 578.2796367701384 0.0 578.2796367701384 0.0 1.3380312008851547 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 1.5051 + + 9 + 1 1.437 72715.8 1.0 12795 5046 17840 HBL1_DMSO_200M_050219_2,17843 HBL1_DMSO_200M_050219_2,17843,PGGPAGQA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17844 95.156 800.0 120080.0 25 0 22119.0 -1 0 88 1071.1442367082668 3210.4108807250004 3 1071.480517566204 MULTI CID FTMS 0 0 0 17840 127233.6640625 1.0 0 0.0 4 4 S{M(Oxidation (M))|F}E 3 -1 13.812 0.0 0.0 0.43023 0.0 0.0 2183.907537074413 660.3474215143186 2844.254958588732 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S{M(Oxidation (M))|F}E 0.43023 - 87 + 1 1.437 77456.6 0.6200000047683716 12796 5046 17840 HBL1_DMSO_200M_050219_2,17844 HBL1_DMSO_200M_050219_2,17844, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17845 95.164 454.0 152040.0 25 0 9931.0 -1 0 94 858.9152630055056 1715.8159730778111 2 858.9131957888603 MULTI CID FTMS 0 0 0 17840 122556.1953125 0.5794998047670817 -2 0.1760406494140625 5 4 [YE]{M(Oxidation (M))|F}A[HV]QSA{M(Oxidation (M))|F}YE{I|L}{I|L} 14 -1 + 66.705 0.0 0.0 3.8877 3.8877 79.361 0.0 0.0 0.0 14.357285695614364 6.064469534817143 6.064469534817143 12.30281985685138 0 0.4247425010840047 0.958607314841775 0.4247425010840047 0.3252574989159953 [YE]{M(Oxidation (M))|F}A[HV]QSA{M(Oxidation (M))|F}YE{I|L}{I|L};[YE]{M(Oxidation (M))|F}A[HV][AG]SA{M(Oxidation (M))|F}YE{I|L}{I|L};[Y{M(Oxidation (M))|F}]EA[HV]QSA{M(Oxidation (M))|F}YE{I|L}{I|L};[YE]{M(Oxidation (M))|F}A[HV][TA]N{M(Oxidation (M))|F}YE{I|L}{I|L};[YE]{M(Oxidation (M))|F}A[EP][QP]A{M(Oxidation (M))|F}YE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QSA{M(Oxidation (M))|F}YE{I|L}{I|L};[Y{M(Oxidation (M))|F}]EA[HV][AG]SA{M(Oxidation (M))|F}YE{I|L}{I|L};[YE]{M(Oxidation (M))|F}A[HV]QSP{[{M(Oxidation (M))|F}H]|[RQ]}E{I|L}{I|L};{[QS]|[NT]}[HS]A[HV]QSA{M(Oxidation (M))|F}YE{I|L}{I|L};[Y{M(Oxidation (M))|F}]EA[HV][TA]N{M(Oxidation (M))|F}YE{I|L}{I|L} 3.8877;3.1706;3.0509;2.9703;2.6532;2.4291;2.3339;2.1823;2.1523;2.1335 -;-;-;-;-;-;-;-;-;- 821 1 1.437 54280.0 1.0 12797 5046 17840 HBL1_DMSO_200M_050219_2,17845 HBL1_DMSO_200M_050219_2,17845, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17846 95.175 659.0 236780.0 25 0 23104.0 + 2902 AVFPDDMPTL 10 148 553.2651345710362 1104.5157162088724 2 553.2653076052666 MULTI CID FTMS 0 0 0 17840 113945.0625 0.1030659025107629 -5 0.374053955078125 6 Unmodified _AVFPDDMPTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 112.59319219568356 0.0013023034114315 4 MPT{I|L} 4 6 34.764 0.0 0.0 3.1474 0.0 0.0 644.2803168942224 0.0 644.2803168942224 0.0 4.761291851668844 0.0 0.0 0 0.7134679910804405 0.0 0.9916440611282626 0.0 + MPT{I|L} 3.1474 + + 1228 + 1 1.437 125765.7 1.0 12798 5046 17840 HBL1_DMSO_200M_050219_2,17846 HBL1_DMSO_200M_050219_2,17846,AVFPDDMPTL True True AVFPDDMPTL 95.175288 553.265307605267 93937790.0 17840.0 nc|ENSG00000118058|Q03164-2|KMT2A;;nc|ENSG00000118058|Q03164|KMT2A;;ENSG00000118058|ENST00000534358|KMT2A 6.028646469116211 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17847 95.189 800.0 177930.0 25 0 15095.0 + 20973 LNLVNRIWWMR 11 119 750.9191403978011 1499.8237278624022 2 750.9199096560478 MULTI CID FTMS 0 0 0 17840 90686.09375 0.3028038274496448 -3 0.218780517578125 7 Unmodified _LNLVNRIWWMR_ REV__ENST00000266517.8_3_12:22838051-22838123:+|nuORF 2.735195868890462 0.8622431031272658 4 [{I|L}V]{M(Oxidation (M))|F}{[SA]|[TG]}ED[PA]VGA{I|L}V{I|L} 15 -1 + 76.555 0.0 0.0 5.1043 5.1043 75.593 0.0 0.0 0.0 7.715752168950161 9.294961543794171 7.715752168950161 3.979400086720375 0 0.6677353201839438 1.5228787452803376 2.309894379144197 0.0 [{I|L}V]{M(Oxidation (M))|F}{[SA]|[TG]}ED[PA]VGA{I|L}V{I|L};[{I|L}V]AE{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[PA]VGA{I|L}V{I|L};[{I|L}V]Q[MN]{[SA]|[TG]}WVGA{I|L}V{I|L};[{I|L}V]{[C(Carbamidomethyl (C))G]|[NC]}R{[SA]|[TG]}WVGA{I|L}V{I|L};[{I|L}V]{M(Oxidation (M))|F}{[SA]|[TG]}ED[PA]VQ{I|L}V{I|L};[{I|L}V]{[C(Carbamidomethyl (C))G]|[NC]}G{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}WVGA{I|L}V{I|L};[{I|L}V]{M(Oxidation (M))|F}{[SA]|[TG]}ED[PA]RA{I|L}V{I|L};[{I|L}V]{[C(Carbamidomethyl (C))G]|[NC]}GV{[SA]|[TG]}WVGA{I|L}V{I|L};[Q{I|L}][Y{I|L}]ED[PA]VGA{I|L}V{I|L};[{I|L}V]{M(Oxidation (M))|F}{[SA]|[TG]}ED[PA]GVA{I|L}V{I|L} 5.1043;4.8389;4.7084;4.7084;4.679;4.6638;4.6582;4.591;4.5898;4.5323 -;-;-;-;-;-;-;-;-;- 9352 1 1.437 104098.7 0.4900000095367431 12799 5046 17840 HBL1_DMSO_200M_050219_2,17847 HBL1_DMSO_200M_050219_2,17847,LNLVNRIWWMR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17849 95.194 31.0 1300200.0 25 0 174620.0 + 44768 YPLQGPGLLSV 11 68 572.3230653247996 1142.631577716399 2 572.3243896365166 MULTI CID FTMS 0 0 0 17848 1531780.125 0.8027371001885812 -1 0.068603515625 1 Unmodified _YPLQGPGLLSV_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 21.799462835604743 0.5803446114589816 4 [VS]{I|L}{[DS]|[MA]|[CV]|TT}[NP]{I|L}{I|L}W 10 7 + 52.425 0.0 0.0 4.5881 4.5881 77.318 0.0 0.0 0.0 7.269987279362624 9.164539485499256 7.269987279362624 7.269987279362624 0 0.5 1.5228787452803376 0.3494850021680094 0.3807196863200844 [VS]{I|L}{[DS]|[MA]|[CV]|TT}[NP]{I|L}{I|L}W;{[TV]|[{I|L}S]}V{[DS]|[MA]|[CV]|TT}[NP]{I|L}{I|L}W;[VS]{I|L}[RN]QQ{I|L}W;[{I|L}P]QY[NP]{I|L}{I|L}[VS];[Q{I|L}]PY[NP]{I|L}{I|L}[VS];{[TV]|[{I|L}S]}V[RN]QQ{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[Q{I|L}][NP]{I|L}{I|L}[VS];[{I|L}P]QV[QP]Y{I|L}[VS];[Q{I|L}]PV[QP]Y{I|L}[VS];[{I|L}P][AG]Y[NP]{I|L}{I|L}[VS] 4.5881;3.9519;3.4895;2.9495;2.8909;2.8533;2.2954;2.2685;2.2099;2.1474 -;-;-;-;-;-;-;-;-;- 183 1 1.452 38849.9 1.0 12800 5047 17848 HBL1_DMSO_200M_050219_2,17849 HBL1_DMSO_200M_050219_2,17849,YPLQGPGLLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17850 95.196 88.0 559770.0 25 0 80424.0 + -1 EAGLELVAWMT 11 65 618.3037989932812 1234.5930450533624 2 618.3045532107353 MULTI CID FTMS 0 0 0 17848 508240.84375 0.0749655854563701 5 -0.4730148315429687 2 Oxidation (M) _EAGLELVAWM(Oxidation (M))T_ REV__ENSG00000155463|ENST00000612549|OXA1L;REV__nc|ENSG00000155463|Q15070-2|OXA1L 16.149105407346934 0.6992268271266642 4 [{I|L}A]GED{I|L}A{I|L} 8 -1 60.75 0.0 0.0 4.9207 0.0 0.0 0.0 449.1508813172874 449.1508813172874 47.65153777800478 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.7302046884880937 0.0 [{I|L}A]GED{I|L}A{I|L} 4.9207 - 356 1 1.452 43157.8 1.0 12801 5047 17848 HBL1_DMSO_200M_050219_2,17850 HBL1_DMSO_200M_050219_2,17850,EAGLELVAWMT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17851 95.198 65.0 1017700.0 25 0 102140.0 + 10152 FPWSEIRNI 9 72 581.304892109068 1160.5952312849358 2 581.3066284060478 MULTI CID FTMS 0 0 0 17848 709967.6875 0.8351484547616767 -4 0.287384033203125 3 Unmodified _FPWSEIRNI_ ENSG00000092820|ENST00000367075|EZR;ENSG00000137710|ENST00000645495|RDX;ENSG00000147065|ENST00000360270|MSN;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX 53.832793166522166 0.0319663582346103 4 {M(Oxidation (M))|F}PWSE{I|L}RN{I|L} 9 0 + 65.425 0.0 0.0 5.6372 5.6372 77.144 0.0 0.0 0.0 37.97792360369971 5.326385825694928 5.326385825694928 3.494850021680086 0 0.6989700043360187 0.0 0.8494850021680094 0.0 + + {M(Oxidation (M))|F}PWSE{I|L}RN{I|L};{M(Oxidation (M))|F}P{I|L}C(Carbamidomethyl (C))E{I|L}RN{I|L};{M(Oxidation (M))|F}PWSE{I|L}RGG{I|L};{M(Oxidation (M))|F}P{[DA]|[EG]}SE{I|L}RN{I|L};{M(Oxidation (M))|F}P{I|L}C(Carbamidomethyl (C))E{I|L}RGG{I|L};{M(Oxidation (M))|F}P{I|L}[CG]E{I|L}RN{I|L};{M(Oxidation (M))|F}P{[DA]|[EG]}SE{I|L}RGG{I|L};{M(Oxidation (M))|F}P{I|L}[CG]E{I|L}RGG{I|L} 5.6372;5.3361;4.8438;4.8438;4.5427;4.5427;4.0542;3.753 +;-;-;-;-;-;-;- + 174 + 1 1.452 59999.6 1.0 12802 5047 17848 HBL1_DMSO_200M_050219_2,17851 HBL1_DMSO_200M_050219_2,17851,FPWSEIRNI True True FPWSEIRNI 95.197573 581.306628406048 27817278.0 17848.0 nc|ENSG00000137710|P35241-5|RDX;;ENSG00000137710|ENST00000645495|RDX;;ENSG00000147065|ENST00000360270|MSN;;ENSG00000092820|ENST00000367075|EZR;;nc|ENSG00000137710|P35241-4|RDX 7.216465314229329 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17852 95.2 129.0 451220.0 25 0 72870.0 + 5592 DNADLILIEL 10 83 564.8111280630062 1127.6077031928123 2 564.8115722537041 MULTI CID FTMS 0 0 0 17848 337311.75 0.0948169766511138 -3 0.2446441650390625 4 Unmodified _DNADLILIEL_ REV__ENSG00000075275|ENST00000674500|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6-2|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6|CELSR1 32.89776655970281 0.2325650513667944 4 {I|L}{I|L}{I|L} 3 -1 22.676 0.0 0.0 2.011 0.0 0.0 0.0 785.3320738805654 785.3320738805654 0.5090746888058106 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}{I|L} 2.011 + + 67 1 1.452 51241.6 1.0 12803 5047 17848 HBL1_DMSO_200M_050219_2,17852 HBL1_DMSO_200M_050219_2,17852,DNADLILIEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17853 95.204 199.0 372530.0 25 0 27815.0 43877 YFPDYSIGNL 10 100 594.7813257044941 1187.548098475788 2 594.7825195193291 MULTI CID FTMS 0 0 0 17848 309485.4375 0.8445339691058622 3 -0.2611770629882812 5 Unmodified _YFPDYSIGNL_ ENSG00000164815|ENST00000297431|ORC5;ENST00000463152.5_1_7:103824789-103838202:-|nuORF;ENST00000485726.1_1_7:103828364-103848439:-|nuORF;nc|ENSG00000164815|O43913-2|ORC5 26.88365393820708 0.3646707531412818 4 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}S{[VA]|[{I|L}G]}N{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E] 10 7 + 28.796 0.0 0.0 2.4248 2.4248 72.317 0.0 0.0 0.0 4.52030043118884 3.135605696547618 3.135605696547618 8.41711820038406 0 0.0 1.0 0.5 0.5891368308784531 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}S{[VA]|[{I|L}G]}N{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];[DP]YS{[VA]|[{I|L}G]}N{M(Oxidation (M))|F}[Y{I|L}];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}S{[VA]|[{I|L}G]}GG{M(Oxidation (M))|F}[Y{I|L}];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{[QS]|[NT]}{M(Oxidation (M))|F}P[{M(Oxidation (M))|F}E];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}D{[VA]|[{I|L}G]}N{M(Oxidation (M))|F}[Y{I|L}];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{[QS]|[NT]}P{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{[DS]|[MA]|[CV]|TT}[WY]N{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[Y{I|L}][{M(Oxidation (M))|F}E]P[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}PHH[YG]GN{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S[TP]N{M(Oxidation (M))|F}[Y{I|L}] 2.4248;1.7161;1.6531;1.601;1.326;1.3067;1.1263;0.74271;0.74236;0.65147 -;-;-;-;-;-;-;-;-;- 325 1 1.452 59915.2 1.0 12804 5047 17848 HBL1_DMSO_200M_050219_2,17853 HBL1_DMSO_200M_050219_2,17853,YFPDYSIGNL False True FPWNEIRNI 95.204036 594.782519519329 559453.5 17848.0 nc|ENSG00000186575|P35240-6|NF2;;nc|ENSG00000186575|P35240-5|NF2;;nc|ENSG00000186575|P35240-3|NF2;;nc|ENSG00000186575|P35240-8|NF2;;nc|ENSG00000186575|P35240-10|NF2;;nc|ENSG00000186575|P35240-4|NF2;;ENSG00000186575|ENST00000338641|NF2;;nc|ENSG00000186575|P35240-2|NF2 -0.2600892384847005 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17854 95.207 170.0 506940.0 25 0 52478.0 + 43460 SIVNHLEFL 9 107 536.2968985135268 1070.5792440938535 2 536.2963744997978 MULTI CID FTMS 0 0 0 17848 292382.0 0.783822085024062 -1 0.068603515625 6 Unmodified _WTTLPPPLF_ ENSG00000086758|ENST00000262854|HUWE1;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 30.22481116460888 0.1466181017706357 4 [H{I|L}]NVS{I|L}E{I|L}{M(Oxidation (M))|F} 9 7 + 52.252 0.0 0.0 4.8808 4.8808 79.289 0.0 0.0 0.0 8.416375079047498 14.973024840566469 8.416375079047498 8.416375079047498 0 0.5 1.2218487496163564 0.3252574989159953 0.0 [H{I|L}]NVS{I|L}E{I|L}{M(Oxidation (M))|F};[HN]V{I|L}S{I|L}E{I|L}{M(Oxidation (M))|F};[H{I|L}]GGVS{I|L}E{I|L}{M(Oxidation (M))|F};[H{I|L}]EKRE{I|L}{M(Oxidation (M))|F};[H{I|L}]NVE{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F};[H{I|L}]NEV{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F};[H{I|L}][KG]D{I|L}E{I|L}{M(Oxidation (M))|F};[HN]{I|L}VS{I|L}E{I|L}{M(Oxidation (M))|F};[H{I|L}]ENV{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F};[{I|L}P]PQD{I|L}E{I|L}{M(Oxidation (M))|F} 4.8808;4.0946;4.0206;4.0206;3.9132;3.6321;3.6012;3.5322;3.4676;3.4583 -;-;-;-;-;-;-;-;-;- 854 1 1.452 71642.3 1.0 12805 5047 17848 HBL1_DMSO_200M_050219_2,17854 HBL1_DMSO_200M_050219_2,17854,WTTLPPPLF False False SIVNHLEFL 95.207369 536.296374499798 2957628.5 17848.0 ENSG00000086758|ENST00000262854|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 2.9780032634735107 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17855 95.212 238.0 399770.0 25 0 36943.0 + 10765 FYLSKMISM 9 115 560.2820082106184 1118.5494634880367 2 560.2832519412041 MULTI CID FTMS 0 0 0 17848 159057.375 0.7488705887857356 -1 0.068603515625 7 Unmodified _FYLSKMISM_ ENSG00000113161|ENST00000287936|HMGCR;ENST00000504466.1_1_5:74645886-74647190:+|nuORF;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 27.628801355627647 0.1796483985696185 4 {[TV]|[{I|L}S]}KM{I|L}SM[Y{M(Oxidation (M))|F}] 9 4 + 35.172 0.0 0.0 3.1445 3.1445 68.941 0.0 0.0 0.0 4.674938550732936 4.762036441594198 4.674938550732936 3.9794000867203785 0 0.0 1.154901959985743 0.7302046884880937 0.0 {[TV]|[{I|L}S]}KM{I|L}SM[Y{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}MK{I|L}SM[Y{M(Oxidation (M))|F}];[KS]M{I|L}{I|L}SM[Y{M(Oxidation (M))|F}];[KS]{I|L}M{I|L}SM[Y{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}K{I|L}{I|L}SM[Y{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}KMS{I|L}M[Y{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K{I|L}SM[Y{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}MKS{I|L}M[Y{M(Oxidation (M))|F}];[KS]M{I|L}S{I|L}M[Y{M(Oxidation (M))|F}];[KS]{I|L}MS{I|L}M[Y{M(Oxidation (M))|F}] 3.1445;2.7887;2.7265;2.5794;2.5639;2.3331;2.0611;1.9774;1.9152;1.7681 -;-;-;-;-;-;-;-;-;- 834 1 1.452 76490.5 1.0 12806 5047 17848 HBL1_DMSO_200M_050219_2,17855 HBL1_DMSO_200M_050219_2,17855,FYLSKMISM False True FYLSKMISM 95.211827 560.283251941204 1515322.625 17848.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR;;ENST00000504466.1_1_5:74645886-74647190:+|nuORF 4.201775550842285 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17856 95.219 387.0 409370.0 25 0 34383.0 + 33487 SIIEYLPTLR 10 118 602.8509098868194 1203.6872668404387 2 602.8521606326103 MULTI CID FTMS 0 0 0 17848 146226.21875 0.3921423185179437 -2 0.1380157470703125 8 Unmodified _SIIEYLPTLR_ ENSG00000176208|ENST00000321990|ATAD5 80.6760300276096 0.0165137828474802 4 {[TV]|[{I|L}S]}{I|L}EY{I|L}ATVE 10 3 84.924 0.0 0.0 7.0553 0.0 0.0 0.0 82.06688104801015 82.06688104801015 50.66134134136104 0.0 0.0 0.0 0 1.048455006504028 2.0 1.23239816956497 0.0 {[TV]|[{I|L}S]}{I|L}EY{I|L}ATVE 7.0553 - 847 + 1 1.452 115769.4 1.0 12807 5047 17848 HBL1_DMSO_200M_050219_2,17856 HBL1_DMSO_200M_050219_2,17856,SIIEYLPTLR True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17857 95.233 800.0 177970.0 25 0 24143.0 + + -1 RLLEITEGSEFL 12 113 703.8791839073493 1405.7438148814986 2 703.8795654177666 MULTI CID FTMS 0 0 0 17848 146733.171875 1.0 0 0.0 9 Oxidation (M) _MLYM(Oxidation (M))LLFISFL_ ENSG00000165898|ENST00000556816|ISCA2;ENST00000555139.1_1_14:74960477-74961199:+|nuORF 18.1463463914782 0.6576820063886638 4 E{I|L}TEGSE{M(Oxidation (M))|F}{I|L} 9 -1 85.711 0.0 0.0 6.0972 0.0 0.0 382.2691212384781 0.0 382.2691212384781 0.0 68.87849394003545 0.0 0.0 0 0.8807196863200843 0.0 1.6549471895720984 0.0 E{I|L}TEGSE{M(Oxidation (M))|F}{I|L} 6.0972 - 910 1 1.452 104185.6 0.6000000238418579 12808 5047 17848 HBL1_DMSO_200M_050219_2,17857 HBL1_DMSO_200M_050219_2,17857,MLYMLLFISFL False False RLLEITEGSEFL 95.232604 703.879565417767 968392.625 17848.0 ENSG00000165898|ENST00000556816|ISCA2;;ENST00000555139.1_1_14:74960477-74961199:+|nuORF 7.398335933685303 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17858 95.246 800.0 158810.0 25 0 11025.0 + -1 FLVKLMMKLSL 11 110 677.8945685800051 1353.77458422681 2 677.8955566287041 MULTI CID FTMS 0 0 0 17848 98692.96875 1.0 0 0.0 10 2 Oxidation (M) _FLVKLM(Oxidation (M))M(Oxidation (M))KLSL_ REV__ENST00000330029.6_1_22:30165712-30165913:+|nuORF 53.40400417844725 0.0987786977674846 4 {I|L}{M(Oxidation (M))|F}VK{I|L}DD{I|L}Q 9 -1 114.65 0.0 0.0 8.4691 0.0 0.0 0.0 279.171428950045 279.171428950045 76.04686933703424 0.0 0.0 0.0 0 2.4143943297944483 0.8860566476931632 1.7059771852360797 1.5994850021680094 {I|L}{M(Oxidation (M))|F}VK{I|L}DD{I|L}Q 8.4691 - 1665 + 1 1.452 97822.0 0.5 12809 5047 17848 HBL1_DMSO_200M_050219_2,17858 HBL1_DMSO_200M_050219_2,17858,FLVKLMMKLSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17860 95.255 340.0 184850.0 25 0 25963.0 + 8811 EYCSMIIELV 10 106 600.2880696612991 1198.561586389398 2 600.2882568240166 MULTI CID FTMS 0 0 0 17859 159045.90625 0.5011899332835767 3 -0.3058013916015625 1 Unmodified _EYCSMIIELV_ ENST00000498159.1_1_3:157287125-157287392:+|nuORF 19.256988751693697 0.5244284437930726 4 {[QN]|[E{I|L}]|[KN]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}CCY{I|L}V 10 6 + 44.019 0.0 0.0 3.6726 3.6726 79.789 0.0 0.0 0.0 10.513910938248811 10.022183007410549 10.022183007410549 16.972805581256196 0 0.6989700043360187 2.0 1.2134679910804405 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}CCY{I|L}V;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))Q]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{I|L}V;[Y{I|L}][WH][HC]E{I|L}V 3.6726;2.2565;1.1192 -;-;- 258 1 1.452 47798.3 1.0 12810 5048 17859 HBL1_DMSO_200M_050219_2,17860 HBL1_DMSO_200M_050219_2,17860,EYCSMIIELV False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17861 95.257 96.0 455930.0 25 0 47477.0 + 10260 FQVGDGIGMDL 11 85 576.2728215225617 1150.5310901119233 2 576.2735473513603 MULTI CID FTMS 0 0 0 17859 425928.75 0.3678754714597804 -2 0.1259002685546875 2 Unmodified _FQVGDGIGMDL_ ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF;ENST00000584992.1_1_18:21044583-21047491:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3 27.22323531849824 0.4529927607131788 4 MD{I|L} 3 8 27.58 0.0 0.0 2.3972 0.0 0.0 773.3701536878983 0.0 773.3701536878983 0.0 16.74253706805957 0.0 0.0 0 0.5 0.0 0.2887254899964357 0.0 + MD{I|L} 2.3972 + + 186 + 1 1.452 40295.5 1.0 12811 5048 17859 HBL1_DMSO_200M_050219_2,17861 HBL1_DMSO_200M_050219_2,17861,FQVGDGIGMDL False True FQVGDGIGMDL 95.257237 576.27354735136 9017182.0 17859.0 ENST00000584992.1_1_18:21044583-21047491:+|nuORF;;nc|ENSG00000101782|O14730-2|RIOK3;;ENSG00000101782|ENST00000339486|RIOK3;;ENST00000581302.5_1_18:21033283-21057068:+|nuORF 4.562368392944336 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17862 95.259 97.0 710380.0 25 0 60248.0 27126 PFLWGPRV 8 77 486.2768309585354 970.539108983871 2 486.2769958376884 MULTI CID FTMS 0 0 0 17859 340111.84375 0.2266380710713173 -8 0.590850830078125 3 Unmodified _PFLWGPRV_ nc|ENSG00000166473|Q7Z442-6|PKD1L2 22.4526382665184 0.5719518724627818 4 WP{M(Oxidation (M))|F}{I|L} 4 6 49.412 0.0 0.0 5.0912 0.0 0.0 0.0 424.23152395211 424.23152395211 27.01667520279372 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.0 0.0 WP{M(Oxidation (M))|F}{I|L} 5.0912 - 122 + 1 1.452 58046.5 1.0 12812 5048 17859 HBL1_DMSO_200M_050219_2,17862 HBL1_DMSO_200M_050219_2,17862,PFLWGPRV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 17863 95.263 182.0 418790.0 25 0 65589.0 + 22506 LPVSPSLLPV 10 105 511.31873715465855 1020.6229213761172 2 511.3187744021416 MULTI CID FTMS 0 0 0 17859 280416.84375 1.0 0 0.0 4 Unmodified _LPVSPSLLPV_ ENST00000476040.6_1_1:110210707-110212286:+|nuORF 43.85829265575387 0.1168243637355526 4 {I|L}T{I|L}{I|L}S{M(Oxidation (M))|F}KS{I|L} 9 8 + 87.885 0.0 0.0 8.6109 8.6109 84.814 0.0 0.0 0.0 34.09776514774366 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.75 2.0 1.024227503252014 0.0 {I|L}T{I|L}{I|L}S{M(Oxidation (M))|F}KS{I|L};{I|L}T{I|L}{I|L}S{M(Oxidation (M))|F}KTV;[VP]{I|L}SPS{I|L}{I|L}PV;[VP]VTPS{I|L}{I|L}PV;{I|L}T{I|L}[PS][HK]{I|L}{I|L};{I|L}T{I|L}[PS][VP]VPV;[VP]{I|L}[RD]{I|L}{I|L}PV;[VP]V{[RE]|[WV]}{I|L}{I|L}PV;{[TV]|[{I|L}S]}[VP]PS{I|L}{I|L}PV;[{I|L}T]V[VP][PS]{I|L}PV 8.6109;8.316;5.27;4.8026;4.1471;4.0192;3.9015;3.4341;3.3567;2.9086 -;-;-;-;-;-;-;-;-;- 692 + 1 1.452 63437.0 1.0 12813 5048 17859 HBL1_DMSO_200M_050219_2,17863 HBL1_DMSO_200M_050219_2,17863,LPVSPSLLPV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17864 95.268 252.0 380710.0 25 0 54938.0 + 12856 GVVIHLPGL 9 87 452.783891131781 903.553229330362 2 452.7838012576103 MULTI CID FTMS 0 0 0 17859 255560.859375 1.0 0 0.0 5 Unmodified _GVVIHLPGL_ ENSG00000035687|ENST00000366535|ADSS2;ENSG00000185100|ENST00000330877|ADSS1;ENST00000557582.5_1_14:105204639-105207027:+|nuORF;ENST00000588022.1_1_17:33786947-33787550:-|nuORF;nc|ENSG00000185100|Q8N142-2|ADSS1 79.93452657146344 0.0175326119056068 4 [VG]V{I|L}H{I|L}PG{I|L} 9 0 + 59.637 0.0 0.0 6.6002 6.6002 86.536 0.0 0.0 0.0 21.62848732905715 8.750612633917001 8.750612633917001 8.750612633917001 0 1.5356668758921828 2.0 0.0 0.0 + + [VG]V{I|L}H{I|L}PG{I|L};[VG]V{I|L}H{I|L}A[VP];[VG]V{I|L}H[VP]A{I|L} 6.6002;5.6318;4.3881 +;-;- + 175 + 1 1.452 77664.4 1.0 12814 5048 17859 HBL1_DMSO_200M_050219_2,17864 HBL1_DMSO_200M_050219_2,17864,GVVIHLPGL True True GVVIHLPGL 95.267544 452.78380125761 7486155.0 17859.0 ENSG00000035687|ENST00000366535|ADSS2;;ENST00000588022.1_1_17:33786947-33787550:-|nuORF;;ENST00000557582.5_1_14:105204639-105207027:+|nuORF;;nc|ENSG00000185100|Q8N142-2|ADSS1;;ENSG00000185100|ENST00000330877|ADSS1 5.978732744852702 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17865 95.273 291.0 239220.0 25 0 31783.0 + 9239 FGTALNYVSL 10 101 542.7876668202873 1083.5607807073743 2 542.7877685427666 MULTI CID FTMS 0 0 0 17859 190398.6875 0.6012516755140915 2 -0.2038803100585937 6 Unmodified _FGTALNYVSL_ ENSG00000160285|ENST00000397728|LSS;nc|ENSG00000160285|P48449-2|LSS;nc|ENSG00000160285|P48449-3|LSS 59.05245873256422 0.0390717477387156 4 VYN{I|L}ATW 7 9 38.678 0.0 0.0 3.5696 0.0 0.0 218.13849174428705 0.0 218.13849174428705 0.0 4.280653954384746 0.0 0.0 0 0.0 0.0 1.5629529932484498 0.2742275032520141 VYN{I|L}ATW 3.5696 - 1012 + 1 1.452 62183.4 1.0 12815 5048 17859 HBL1_DMSO_200M_050219_2,17865 HBL1_DMSO_200M_050219_2,17865,FGTALNYVSL True True FGTALNYVSL 95.272886 542.787768542767 2561685.75 17859.0 nc|ENSG00000160285|P48449-2|LSS;;nc|ENSG00000160285|P48449-3|LSS;;ENSG00000160285|ENST00000397728|LSS 3.490299701690674 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17866 95.278 257.0 509120.0 25 0 69013.0 -1 0 115 946.4345463543174 1890.854539775435 2 946.4315063357352 MULTI CID FTMS 0 0 0 17859 145424.71875 0.277738248025462 -3 0.1953125 7 4 [{I|L}T]{I|L}{M(Oxidation (M))|F}NS 6 -1 21.57 0.0 0.0 1.1407 0.0 0.0 0.0 1212.4813457659222 1212.4813457659222 -2.000215533585422 0.0 -2.000215533585422 0.0 0 0.0 0.958607314841775 0.2396518287104437 0.0 [{I|L}T]{I|L}{M(Oxidation (M))|F}NS 1.1407 - 1520 1 1.452 91062.2 1.0 12816 5048 17859 HBL1_DMSO_200M_050219_2,17866 HBL1_DMSO_200M_050219_2,17866, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17867 95.285 400.0 310090.0 25 0 45559.0 + 33512 SILADRILL 9 122 507.3212510606419 1012.6279491880838 2 507.3218261599541 MULTI CID FTMS 0 0 0 17859 155699.359375 1.0 0 0.0 8 Unmodified _SILADRILL_ ENSG00000100934|ENST00000307712|SEC23A;ENSG00000101310|ENST00000650089|SEC23B;nc|ENSG00000100934|Q15436-2|SEC23A 45.739877483867886 0.0497104363764649 4 {[TV]|[{I|L}S]}{I|L}GV{I|L}AD{I|L}{I|L} 10 5 + 77.037 0.0 0.0 7.6076 7.6076 78.262 0.0 0.0 0.0 20.56302500767288 15.026975159433531 15.026975159433531 0.5115252244738144 0 1.6989700043360187 2.0 0.3494850021680094 0.0 {[TV]|[{I|L}S]}{I|L}GV{I|L}AD{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}GV{I|L}W{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}GVW{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}R{I|L}AD{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}R{I|L}W{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}GVA{I|L}D{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}GVAD{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}RW{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}RA{I|L}D{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}G[TP]{I|L}S{I|L}{I|L} 7.6076;7.5571;7.338;7.2598;7.2147;7.187;7.0913;6.9956;6.8392;6.7738 -;-;-;-;-;-;-;-;-;- 2315 1 1.452 99029.5 1.0 12817 5048 17859 HBL1_DMSO_200M_050219_2,17867 HBL1_DMSO_200M_050219_2,17867,SILADRILL True True SILADRILL 95.284827 507.321826159954 939964.75 17859.0 nc|ENSG00000100934|Q15436-2|SEC23A;;ENSG00000100934|ENST00000307712|SEC23A;;ENSG00000101310|ENST00000650089|SEC23B 3.693521896998088 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17868 95.289 201.0 257310.0 25 0 45730.0 + 22628 LPYNPMMVV 9 83 532.2696169682857 1062.5246810033714 2 532.2693359255791 MULTI CID FTMS 0 0 0 17859 138015.765625 1.0 0 0.0 9 Unmodified _LPYNPMMVV_ ENSG00000004975|ENST00000005340|DVL2 23.1484247019978 0.2366544122328345 4 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y[NS]PKV 9 7 + 31.929 0.0 0.0 3.005 3.005 78.936 0.0 0.0 0.0 12.478109286651248 13.372505457509977 12.478109286651248 23.566147098514705 0 0.0 0.0 0.3054621874040891 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y[NS]PKV;{[{M(Oxidation (M))|F}C]|[YS]}[R{I|L}][NS]PKV;{I|L}{I|L}[WM][R{I|L}][EC] 3.005;0.78703;0.21197 -;-;- 132 + 1 1.452 47274.6 1.0 12818 5048 17859 HBL1_DMSO_200M_050219_2,17868 HBL1_DMSO_200M_050219_2,17868,LPYNPMMVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17869 95.303 800.0 211000.0 25 0 15505.0 43725 YDEKNLKIKPF 11 116 697.8886475559414 1393.7627421786826 2 697.8894531130791 MULTI CID FTMS 0 0 0 17859 133667.578125 0.5892701714593678 -3 0.1953125 10 Unmodified _YDEKNLKIKPF_ ENSG00000146414|ENST00000275233|SHPRH;ENST00000433355.6_1_6:146231577-146267398:-|nuORF;nc|ENSG00000146414|Q149N8-2|SHPRH;nc|ENSG00000146414|Q149N8-4|SHPRH 16.149105407346934 0.6992268271266642 4 {[QN]|[E{I|L}]|[KN]}P{I|L}K{[HG]|PP}V{I|L}EEM 12 10 + 84.329 0.0 0.0 6.0505 6.0505 83.663 0.0 0.0 0.0 11.760912590556812 16.611814434466197 11.760912590556812 7.658467447160987 0 1.8243923658886183 1.2218487496163564 0.3054621874040891 0.0 {[QN]|[E{I|L}]|[KN]}P{I|L}K{[HG]|PP}V{I|L}EEM;{[QN]|[E{I|L}]|[KN]}P{I|L}K{[HG]|PP}VE{I|L}EM;{[QN]|[E{I|L}]|[KN]}PK{I|L}{[HG]|PP}V{I|L}EEM;[{I|L}P]E{I|L}K{[HG]|PP}V{I|L}EEM;[{I|L}P]{I|L}EK{[HG]|PP}V{I|L}EEM;{[QN]|[E{I|L}]|[KN]}PK{I|L}{[HG]|PP}VE{I|L}EM;[{I|L}P]E{I|L}K{[HG]|PP}VE{I|L}EM;[{I|L}P]EK{I|L}{[HG]|PP}V{I|L}EEM;[{I|L}P]{I|L}EK{[HG]|PP}VE{I|L}EM;[{I|L}T][RP]{I|L}{[HG]|PP}V{I|L}EEM 6.0505;5.501;5.4922;5.2066;5.1586;4.9427;4.6572;4.6483;4.6091;4.3568 -;-;-;-;-;-;-;-;-;- 1223 1 1.452 127107.8 0.5799999833106995 12819 5048 17859 HBL1_DMSO_200M_050219_2,17869 HBL1_DMSO_200M_050219_2,17869,YDEKNLKIKPF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17870 95.316 800.0 255400.0 25 0 28328.0 + 23413 LPPDLSYIV 9 106 1016.5715096150692 1015.5642331484692 1 1016.571032702923 MULTI CID FTMS 0 0 0 17859 131192.296875 0.3994224760072228 4 -0.4157180786132812 11 Unmodified _LTELGRTVQ_ ENST00000525122.1_1_8:145151275-145151461:+|nuORF;ENSG00000179091|ENST00000318911|CYC1;ENST00000533444.1_1_8:145150729-145152236:+|nuORF 36.12702656103203 0.0967173616627612 4 [{I|L}P]DP{I|L}SY{I|L}V 9 7 + 85.328 0.0 0.0 8.402 8.402 81.14 0.0 0.0 0.0 24.13734275855269 45.71424210957076 24.13734275855269 1.249387366082999 0 0.3494850021680094 1.6989700043360187 1.1989700043360187 0.0 [{I|L}P]DP{I|L}SY{I|L}V;[{I|L}P]PD{I|L}SY{I|L}V;[{I|L}P]DPS{I|L}Y{I|L}V;[{I|L}P]PDS{I|L}Y{I|L}V;[{I|L}P]DPSY{I|L}{I|L}V;[{I|L}P]PSD{I|L}Y{I|L}V;[{I|L}P]PDSY{I|L}{I|L}V;[{I|L}P]PS{I|L}DY{I|L}V;[{I|L}P]DSP{I|L}Y{I|L}V;[{I|L}P]D{I|L}PSY{I|L}V 8.402;8.279;8.2763;8.1533;7.7085;7.6835;7.5855;7.5127;7.5101;7.4624 -;-;-;-;-;-;-;-;-;- 4540 1 1.452 133591.5 0.6200000047683716 12820 5048 17859 HBL1_DMSO_200M_050219_2,17870 HBL1_DMSO_200M_050219_2,17870,LTELGRTVQ True False LPPDLSYIV 95.31637 1016.57103270292 1742043.875 17859.0 ENST00000525122.1_1_8:145151275-145151461:+|nuORF;;ENSG00000179091|ENST00000318911|CYC1;;ENST00000533444.1_1_8:145150729-145152236:+|nuORF 5.363305568695068 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17871 95.321 202.0 287190.0 25 0 35514.0 + 13579 HPLILDEKI 9 111 539.3178698332674 1076.6211867333348 2 539.3193237185478 MULTI CID FTMS 0 0 0 17859 133147.515625 0.0346089111941252 6 -0.5754623413085938 12 Unmodified _HPLILDEKI_ REV__ENSG00000145945|ENST00000648326|FAM50B 19.438996006549623 0.310492472477042 4 [{I|L}A]G[HD]{I|L}{I|L}V 8 -1 27.88 0.0 0.0 2.5896 0.0 0.0 0.0 255.13300248944728 255.13300248944728 12.513097295772807 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]G[HD]{I|L}{I|L}V 2.5896 - 530 1 1.452 53865.8 1.0 12821 5048 17859 HBL1_DMSO_200M_050219_2,17871 HBL1_DMSO_200M_050219_2,17871,HPLILDEKI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17872 95.326 229.0 455790.0 25 0 72666.0 + 18295 KVLDFEHFL 9 103 383.2094390089342 1146.6064876270027 3 383.2095825076103 MULTI CID FTMS 0 0 0 17859 135415.8125 0.1643442652794102 -2 0.1259002685546875 13 Unmodified _KVLDFEHFL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 79.59630418116434 0.0176145593575188 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{M(Oxidation (M))|F}EH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 0 + 40.042 0.0 0.0 3.4922 3.4922 70.071 0.0 0.0 0.0 4.152186429774709 7.147642715192504 4.152186429774709 4.152186429774709 0 1.024227503252014 0.0 1.1989700043360187 0.7898166913470483 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{M(Oxidation (M))|F}EH{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[{M(Oxidation (M))|F}H]|[RQ]}E{I|L}[WR]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}[WR]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]{I|L}[KC][WQ]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.4922;3.1301;2.585;0.041658 +;-;-;- + 151 1 1.452 85805.1 1.0 12822 5048 17859 HBL1_DMSO_200M_050219_2,17872 HBL1_DMSO_200M_050219_2,17872,KVLDFEHFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17874 95.331 15.0 3880700.0 25 0 538010.0 + 4922 DGLLRVLTV 9 73 493.30532047801137 984.5960880228228 2 493.3059265017509 MULTI CID FTMS 0 0 0 17873 3977618.25 1.0 0 0.0 1 Unmodified _DGLLRVLTV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 70.33199760932243 0.0209706178985989 4 [DG]{I|L}{I|L}RV{I|L}TV 9 0 + 68.527 0.0 0.0 6.9599 6.9599 93.676 0.0 0.0 0.0 17.636372634590458 45.28303006573224 17.636372634590458 28.666352752694287 0 1.6989700043360187 1.154901959985743 0.7134679910804405 0.0 + + [DG]{I|L}{I|L}RV{I|L}TV;{[TV]|[{I|L}S]}{I|L}[R{I|L}][PS]TV;{[TV]|[{I|L}S]}{I|L}[R{I|L}]VGEV;[DG]{I|L}{I|L}RT[{I|L}V]V;{[TV]|[{I|L}S]}{I|L}[RV]G{I|L}EV;{[TV]|[{I|L}S]}{I|L}[RV][TP]TV;{[TV]|[{I|L}S]}{I|L}[RV]{I|L}GEV;[{I|L}T]V[R{I|L}][PS]TV;[{I|L}T]V[R{I|L}]VGEV;[{I|L}T]V[RV]G{I|L}EV 6.9599;4.0484;4.0432;3.9487;3.7471;3.6255;3.6202;2.5302;2.5249;2.2289 +;-;-;-;-;-;-;-;-;- + 541 1 1.461 50651.1 1.0 12823 5049 17873 HBL1_DMSO_200M_050219_2,17874 HBL1_DMSO_200M_050219_2,17874,DGLLRVLTV True True DGLLRVLTV 95.330512 493.305926501751 30365124.0 17873.0 chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;;nc|ENSG00000165025|P43405-2|SYK;;ENSG00000165025|ENST00000375754|SYK 6.008186896642049 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17875 95.332 20.0 2831300.0 25 0 305400.0 + 8566 ETLRLALEI 9 73 529.3185966446412 1056.6226403560822 2 529.3177978396416 MULTI CID FTMS 0 0 0 17873 1692442.375 0.7977014927659444 1 -0.1245880126953125 2 Unmodified _ETLRLALEI_ REV__ENSG00000115484|ENST00000394440|CCT4;REV__nc|ENSG00000115484|P50991-2|CCT4 32.30548876998284 0.1201446275138228 4 {[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}TE{I|L} 9 -1 + 65.799 0.0 0.0 6.2273 6.2273 90.637 0.0 0.0 0.0 15.348778926609969 39.21807013191423 15.348778926609969 24.42446448380258 0 1.0501648626366045 0.9208187539523752 0.7215141619232908 0.0 {[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}TE{I|L};{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[VP]{M(Oxidation (M))|F}{I|L} 6.2273;3.9157 -;- 177 1 1.461 52808.8 1.0 12824 5049 17873 HBL1_DMSO_200M_050219_2,17875 HBL1_DMSO_200M_050219_2,17875,ETLRLALEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17876 95.333 20.0 3495300.0 25 0 397390.0 + 18297 KVLDFEHFL 9 87 574.3107147304196 1146.606876527639 2 574.3111450076103 MULTI CID FTMS 0 0 0 17873 2310607.5 0.5486030031085266 -1 0.0792922973632812 3 Unmodified _KVLDFEHFL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 63.22749603027936 0.0242951379232427 4 KV{I|L}D[{M(Oxidation (M))|F}E]H{M(Oxidation (M))|F}{I|L} 9 0 + 72.014 0.0 0.0 6.2806 6.2806 92.335 0.0 0.0 0.0 21.374054056648404 10.908458057352192 10.908458057352192 72.01400107794424 0 2.6549471895720984 0.0 0.5 0.0 + + KV{I|L}D[{M(Oxidation (M))|F}E]H{M(Oxidation (M))|F}{I|L} 6.2806 + + 218 + 1 1.461 57099.1 1.0 12825 5049 17873 HBL1_DMSO_200M_050219_2,17876 HBL1_DMSO_200M_050219_2,17876,KVLDFEHFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17877 95.336 160.0 500900.0 25 0 54535.0 + 35787 SVIPVINKIDL 11 92 605.8737144040244 1209.7328758748488 2 605.8742553591728 MULTI CID FTMS 0 0 0 17873 418240.15625 0.8883138710316312 1 -0.1245880126953125 4 Unmodified _SVIPVINKIDL_ ENSG00000151806|ENST00000281543|GUF1;ENST00000506793.5_1_4:44680541-44700695:+|nuORF 47.7319792270244 0.130190323903946 4 [VP]{I|L}NK{I|L}D{I|L} 8 3 54.518 0.0 0.0 4.5067 0.0 0.0 0.0 314.1775660854185 314.1775660854185 -2.161903266879719 0.0 -2.161903266879719 0.0 0 0.0 1.5228787452803376 0.0 0.6549471895720984 + [VP]{I|L}NK{I|L}D{I|L} 4.5067 + + 632 1 1.461 65560.3 1.0 12826 5049 17873 HBL1_DMSO_200M_050219_2,17877 HBL1_DMSO_200M_050219_2,17877,SVIPVINKIDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17878 95.34 220.0 396020.0 25 0 38834.0 11776 GLLAVLRPL 9 79 476.3211709827705 950.6277890323412 2 476.3213683962822 MULTI CID FTMS 0 0 0 17873 306812.90625 0.2106137927353654 4 -0.4079208374023437 5 Unmodified _GLLAVLRPL_ ENSG00000168569|ENST00000307366|TMEM223 60.38955033654506 0.025866396858536 4 {[VA]|[{I|L}G]}{I|L}AV{I|L}[RP]{I|L} 9 0 + 71.827 0.0 0.0 7.5557 7.5557 87.173 0.0 0.0 0.0 52.16122940350314 10.355994895545251 10.355994895545251 6.064921830680703 0 1.305462187404089 2.0 0.0 0.7302046884880937 + + {[VA]|[{I|L}G]}{I|L}AV{I|L}[RP]{I|L};{[VA]|[{I|L}G]}{I|L}A{I|L}V[RP]{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}G{I|L}[RP]{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}AV[RP]{I|L} 7.5557;6.9178;6.8386;6.2006 +;-;-;- + 410 + 1 1.461 74636.6 1.0 12827 5049 17873 HBL1_DMSO_200M_050219_2,17878 HBL1_DMSO_200M_050219_2,17878,GLLAVLRPL True True AVLAVLPRL 95.340177 476.321368396282 43347417.0 17873.0 ENST00000463906.1_1_1:43630116-43636618:-|nuORF;;ENSG00000117395|ENST00000236051|EBNA1BP2 4.892250219980876 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17879 95.347 393.0 222400.0 25 0 18881.0 20860 LMHCVGFESIL 11 84 624.8092058557472 1247.6038587782944 2 624.8098632693291 MULTI CID FTMS 0 0 0 17873 215740.28125 1.0 0 0.0 6 Unmodified _LMHCVGFESIL_ ENSG00000178177|ENST00000635767|LCORL;nc|ENSG00000178177|Q8N3X6-3|LCORL;nc|ENSG00000178177|Q8N3X6|LCORL 25.399314129420983 0.4958189927824775 4 PAK{I|L}{M(Oxidation (M))|F}{I|L}{I|L} 7 8 53.76 0.0 0.0 4.3091 0.0 0.0 447.08793837715 0.0 447.08793837715 0.0 44.29637907846235 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 PAK{I|L}{M(Oxidation (M))|F}{I|L}{I|L} 4.3091 - 305 1 1.461 76810.0 1.0 12828 5049 17873 HBL1_DMSO_200M_050219_2,17879 HBL1_DMSO_200M_050219_2,17879,LMHCVGFESIL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17880 95.353 329.0 285250.0 25 0 24754.0 + 39002 TVRELFEEL 9 108 568.3034397570207 1134.5923265808412 2 568.3036376833916 MULTI CID FTMS 0 0 0 17873 171884.109375 0.4121810197102761 2 -0.2265090942382812 7 Unmodified _TVRELFEEL_ ENSG00000150990|ENST00000308736|DHX37 37.07464296494664 0.0915153923251136 4 {[TV]|[{I|L}S]}RE{I|L}{M(Oxidation (M))|F}EE{I|L} 9 0 + 68.226 0.0 0.0 6.0133 6.0133 89.478 0.0 0.0 0.0 15.966649594412566 41.22614635435761 15.966649594412566 21.69469995980699 0 1.045114016114533 1.5228787452803376 0.3494850021680094 0.0 + + {[TV]|[{I|L}S]}RE{I|L}{M(Oxidation (M))|F}EE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{I|L}{M(Oxidation (M))|F}EE{I|L};{[TV]|[{I|L}S]}RE{I|L}EE{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{I|L}{M(Oxidation (M))|F}EE{I|L};{[ET]|[MV]}[RV]{I|L}{M(Oxidation (M))|F}EE{I|L};[C(Carbamidomethyl (C))K]T{M(Oxidation (M))|F}{I|L}[WP]A{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{I|L}EE{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP]{I|L}EE{M(Oxidation (M))|F}{I|L};{[ET]|[MV]}[RV]{I|L}EE{M(Oxidation (M))|F}{I|L};[C(Carbamidomethyl (C))K]T{M(Oxidation (M))|F}{I|L}[RV][DP] 6.0133;4.1011;3.5761;3.3097;2.7993;1.6993;1.6639;1.3132;0.36205;0.13661 +;-;-;-;-;-;-;-;-;- + 290 1 1.461 76671.8 1.0 12829 5049 17873 HBL1_DMSO_200M_050219_2,17880 HBL1_DMSO_200M_050219_2,17880,TVRELFEEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17881 95.367 800.0 330750.0 25 0 35550.0 + 9742 FMFDEKLVTV 10 157 614.8177598867569 1227.6209668403137 2 614.8175536990166 MULTI CID FTMS 0 0 0 17873 151644.296875 0.094053976934201 -2 0.1365890502929687 8 Unmodified _FMFDEKLVTV_ ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C 81.9152076656658 0.0154982280583276 4 {M(Oxidation (M))|F}VA{M(Oxidation (M))|F}M{I|L}KE 8 8 71.742 0.0 0.0 5.844 0.0 0.0 0.0 259.0734041803344 259.0734041803344 13.065420532167025 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.8684151806525389 0.0 {M(Oxidation (M))|F}VA{M(Oxidation (M))|F}M{I|L}KE 5.844 - 13713 + 1 1.461 194471.0 0.6200000047683716 12830 5049 17873 HBL1_DMSO_200M_050219_2,17881 HBL1_DMSO_200M_050219_2,17881,FMFDEKLVTV True True FMFDEKLVTV 95.367058 614.817553699017 25228722.0 17873.0 ENSG00000119414|ENST00000373547|PPP6C;;nc|ENSG00000119414|O00743-2|PPP6C;;nc|ENSG00000119414|O00743-3|PPP6C 7.122298399607341 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17882 95.381 800.0 232210.0 25 0 35571.0 + 11728 GLIEIISNA 9 152 465.2692582958616 928.5239636585231 2 465.2700683474541 MULTI CID FTMS 0 0 0 17873 134408.421875 0.4452557989981544 -1 0.0792922973632812 9 Unmodified _GLIEIISNA_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000480835.1_1_2:96943505-96944085:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 74.42276476219924 0.019389277360085 4 {[QN]|[E{I|L}]|[KN]}{I|L}G{I|L} 5 6 44.337 0.0 0.0 4.775 0.0 0.0 0.0 400.1822499523542 400.1822499523542 6.712844850284945 0.0 0.0 0.0 0 0.2887254899964357 0.958607314841775 0.964559192431053 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}G{I|L} 4.775 - 642 1 1.461 144151.9 0.4799999892711639 12831 5049 17873 HBL1_DMSO_200M_050219_2,17882 HBL1_DMSO_200M_050219_2,17882,GLIEIISNA True True GLIEIISNA 95.380872 465.270068347454 5307204.5 17873.0 ENST00000480835.1_1_2:96943505-96944085:-|nuORF;;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 4.96459420522054 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17883 95.39 493.0 440100.0 25 0 43585.0 + 30788 RIFGESIMIGV 11 114 611.3369542423935 1220.659355551587 2 611.3376342654228 MULTI CID FTMS 0 0 0 17873 124114.8046875 0.1335229484692212 -2 0.1365890502929687 10 Unmodified _RIFGESIMIGV_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35;nc|ENSG00000163002|Q8NFH5-3|NUP35 51.41523569358685 0.1097924807909074 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[{M(Oxidation (M))|F}V]AA{I|L}M{I|L}GV 12 5 + 75.261 0.0 0.0 6.1656 6.1656 87.913 0.0 0.0 0.0 9.563631030611576 44.31901438173645 9.563631030611576 11.070680140142072 0 1.5994850021680094 1.6989700043360187 1.41944517631652 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[{M(Oxidation (M))|F}V]AA{I|L}M{I|L}GV;[VG][YV][RD]{I|L}M{I|L}GV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{M(Oxidation (M))|F}]AA{I|L}M{I|L}R;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[R{M(Oxidation (M))|F}][RV]M{I|L}GV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[{M(Oxidation (M))|F}V][RV]M{I|L}R;[VG][YV]E[RV]M{I|L}GV;[VG][YV][PS]S{I|L}M{I|L}R;{[VA]|[{I|L}G]}M[{M(Oxidation (M))|F}V]AA{I|L}M{I|L}GV;[VG][YV]EAA{I|L}M{I|L}R;[VG][YV]{[CA]|SS}P{I|L}M{I|L}R 6.1656;5.2587;5.091;5.0293;4.7629;4.3381;4.2696;4.1835;4.0878;3.8412 -;-;-;-;-;-;-;-;-;- 1849 1 1.461 159898.2 1.0 12832 5049 17873 HBL1_DMSO_200M_050219_2,17883 HBL1_DMSO_200M_050219_2,17883,RIFGESIMIGV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17884 95.401 647.0 218720.0 25 0 24193.0 + 34057 SLLDQIPEM 9 162 523.2654730944278 1044.5163932556554 2 523.2661010622978 MULTI CID FTMS 0 0 0 17873 122034.0625 1.0 0 0.0 11 Unmodified _SLLDQIPEM_ ENSG00000176986|ENST00000345254|SEC24C 96.28474662873226 0.0124266067997264 4 {[TV]|[{I|L}S]}{I|L}DQ{I|L} 6 3 55.499 0.0 0.0 5.3133 0.0 0.0 0.0 372.1221421172367 372.1221421172367 26.14393726401687 0.0 0.0 0.0 0 0.805462187404089 2.0 1.1976212463643423 0.2614393726401688 + {[TV]|[{I|L}S]}{I|L}DQ{I|L} 5.3133 + + 2768 1 1.461 114476.4 1.0 12833 5049 17873 HBL1_DMSO_200M_050219_2,17884 HBL1_DMSO_200M_050219_2,17884,SLLDQIPEM True True SLLDQIPEM 95.400866 523.266101062298 1096145.5 17873.0 ENSG00000176986|ENST00000345254|SEC24C 5.921727180480957 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17885 95.407 227.0 244040.0 25 0 33414.0 + 39070 TVVQYLPTL 9 81 517.3012038037207 0 517.3010742068291 PEAK CID FTMS 0 0 0 17873 119368.046875 0.6863321566782751 -1 0.0792922973632812 12 Unmodified _TVVQYLPTL_ ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-4|NUP214;nc|ENSG00000126883|P35658-5|NUP214 58.6788170122104 0.0182512554486535 4 YQVD 4 8 19.412 0.0 0.0 1.88 0.0 0.0 442.2822710463559 82.06690393619374 524.3491749825496 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.7742275032520141 0.0 YQVD 1.88 - 169 + 1 1.461 48772.4 1.0 12834 5049 17873 HBL1_DMSO_200M_050219_2,17885 HBL1_DMSO_200M_050219_2,17885,TVVQYLPTL True True TVVQYLPTL 95.40663 517.301074206829 1731639.625 17873.0 nc|ENSG00000126883|P35658-2|NUP214;;nc|ENSG00000126883|P35658-5|NUP214;;nc|ENSG00000126883|P35658-4|NUP214;;nc|ENSG00000126883|P35658-3|NUP214;;ENSG00000126883|ENST00000359428|NUP214 5.677751064300537 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17886 95.42 800.0 151340.0 25 0 3679.0 -1 0 105 1178.54310867433 3532.60749662319 3 1179.208911120892 MULTI CID FTMS 0 0 0 17873 100487.4921875 0.6311768841164372 -2 0.1365890502929687 13 4 VQY{M(Oxidation (M))|F}ANQQAED 11 -1 47.899 0.0 0.0 1.3559 0.0 0.0 1860.894525219021 375.1407564752563 2236.0352816942773 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VQY{M(Oxidation (M))|F}ANQQAED 1.3559 - 1042 + 1 1.461 74371.2 0.4199999868869781 12835 5049 17873 HBL1_DMSO_200M_050219_2,17886 HBL1_DMSO_200M_050219_2,17886, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17887 95.424 198.0 455540.0 25 0 76621.0 + 13698 HQIPEFDNLYL 11 76 694.8454106096534 1387.6762682861067 2 694.8454467654228 MULTI CID FTMS 0 0 0 17873 94017.9296875 0.1224720332187629 -2 0.1365890502929687 14 Unmodified _HQIPEFDNLYL_ ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2-3|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1 51.41523569358685 0.1097924807909074 4 [HQ]{I|L}[EP]{M(Oxidation (M))|F}DN{I|L}Y{I|L} 11 0 + 58.39 0.0 0.0 4.2078 4.2078 76.542 0.0 0.0 0.0 2.2262167664189647 28.692129273422573 2.2262167664189647 8.125245087498918 0 0.6549471895720985 0.0 0.7302046884880937 1.1307196863200843 + + [HQ]{I|L}[EP]{M(Oxidation (M))|F}DN{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}ND{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR];[HQ]{I|L}[EP]{M(Oxidation (M))|F}DGG{I|L}Y{I|L};[EP]{M(Oxidation (M))|F}DN{I|L}[HQ]{I|L}Y{I|L};[DN]{I|L}[YV]{M(Oxidation (M))|F}DN{I|L}Y{I|L};[DN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}[HQ]{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}GGD{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR];[HQ]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KT]DN{I|L}Y{I|L};[HQ]{I|L}[EP][DN]{M(Oxidation (M))|F}{I|L}Y{I|L};[DN]{M(Oxidation (M))|F}[EP]{I|L}[HQ]{I|L}Y{I|L} 4.2078;3.6222;3.5499;3.3777;3.3644;3.0909;2.9618;2.8565;2.8565;2.7471 +;-;-;-;-;-;-;-;-;- + 400 1 1.461 71575.9 1.0 12836 5049 17873 HBL1_DMSO_200M_050219_2,17887 HBL1_DMSO_200M_050219_2,17887,HQIPEFDNLYL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17888 95.435 630.0 209890.0 25 0 12089.0 -1 0 120 739.1057409421632 2952.3938579022524 4 739.6078369021416 MULTI CID FTMS 0 0 0 17873 83359.96875 0.4266993008659734 -1 0.0792922973632812 15 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 60.314 0.0 0.0 2.0429 0.0 0.0 0.0 1911.7796834803407 1911.7796834803407 36.87076236157729 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.3252574989159953 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.0429 - 1791 1 1.461 98720.3 1.0 12837 5049 17873 HBL1_DMSO_200M_050219_2,17888 HBL1_DMSO_200M_050219_2,17888, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17889 95.45 800.0 246170.0 25 0 11104.0 -1 0 119 791.3727088192045 2371.096297057813 3 791.7076293826103 MULTI CID FTMS 0 0 0 17873 78425.453125 0.1614083725285772 -13 1.0928421020507812 16 4 {[HG]|PP}APPGDCNRAGM 13 -1 52.191 0.0 0.0 2.2011 0.0 0.0 0.0 1104.5476225244342 1104.5476225244342 13.63878923055237 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.031234684152075 0.0 {[HG]|PP}APPGDCNRAGM 2.2011 - 19332 1 1.461 141818.6 0.449999988079071 12838 5049 17873 HBL1_DMSO_200M_050219_2,17889 HBL1_DMSO_200M_050219_2,17889, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17891 95.455 15.0 3657600.0 25 0 563330.0 + 5593 DNADLILIEL 10 76 564.8111280630062 1127.6077031928123 2 564.8115112185478 MULTI CID FTMS 0 0 0 17890 3557503.75 1.0 0 0.0 1 Unmodified _DNADLILIEL_ REV__ENSG00000075275|ENST00000674500|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6-2|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6|CELSR1 32.89776655970281 0.2325650513667944 4 {[QN]|[E{I|L}]|[KN]}D[NG]{I|L}{I|L} 7 -1 37.145 0.0 0.0 3.2941 0.0 0.0 0.0 370.1978849171018 370.1978849171018 5.462207055827975 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.6237125054200234 1.3494850021680094 {[QN]|[E{I|L}]|[KN]}D[NG]{I|L}{I|L} 3.2941 - 105 1 1.471 46526.3 1.0 12839 5050 17890 HBL1_DMSO_200M_050219_2,17891 HBL1_DMSO_200M_050219_2,17891,DNADLILIEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17892 95.457 65.0 822550.0 25 0 47194.0 10153 FPWSEIRNI 9 85 581.304892109068 1160.5952312849358 2 581.3057128787041 MULTI CID FTMS 0 0 0 17890 732501.5625 0.8616554792606512 -1 0.1245880126953125 2 Unmodified _FPWSEIRNI_ ENSG00000092820|ENST00000367075|EZR;ENSG00000137710|ENST00000645495|RDX;ENSG00000147065|ENST00000360270|MSN;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX 26.268140514670165 0.1969607489560049 4 {M(Oxidation (M))|F}VNY{I|L}Q{I|L}[HQ] 9 8 + 54.614 0.0 0.0 4.7057 4.7057 75.147 0.0 0.0 0.0 8.353481135844874 1.249387366082999 1.249387366082999 4.771212547196626 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}VNY{I|L}Q{I|L}[HQ];{M(Oxidation (M))|F}VN{I|L}YQ{I|L}[HQ];{M(Oxidation (M))|F}VNYQ{I|L}{I|L}[HQ];{M(Oxidation (M))|F}VNY{I|L}[AG]{I|L}[HQ];{M(Oxidation (M))|F}VGGY{I|L}Q{I|L}[HQ];{M(Oxidation (M))|F}P[KT]YQ{I|L}[HQ];{M(Oxidation (M))|F}VNY{I|L}Q[HQ]{I|L};{M(Oxidation (M))|F}VGGYQ{I|L}{I|L}[HQ];{M(Oxidation (M))|F}VN{I|L}Y[AG]{I|L}[HQ];{M(Oxidation (M))|F}VGG{I|L}YQ{I|L}[HQ] 4.7057;4.2946;4.2946;3.9123;3.9123;3.789;3.6924;3.5012;3.5012;3.5012 -;-;-;-;-;-;-;-;-;- 661 + 1 1.471 46446.8 1.0 12840 5050 17890 HBL1_DMSO_200M_050219_2,17892 HBL1_DMSO_200M_050219_2,17892,FPWSEIRNI False True IPWLQYNEV 95.456676 581.305712878704 16255970.0 17890.0 nc|ENSG00000198961|O43164-2|PJA2;;ENSG00000198961|ENST00000361189|PJA2 4.920283317565918 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17893 95.458 29.0 1935200.0 25 0 228380.0 24646 MLQEPLLVV 9 76 529.2998306384247 1056.5851083436494 2 529.3002197146416 MULTI CID FTMS 0 0 0 17890 728657.3125 0.7082998453024604 -1 0.1245880126953125 3 Oxidation (M) _M(Oxidation (M))LQEPLLVV_ ENSG00000163902|ENST00000296255|RPN1 49.93300154707207 0.0405168250806675 4 {[QN]|[E{I|L}]|[KN]}P{I|L}Q{M(Oxidation (M))|F}{I|L}VV 9 4 + 49.689 0.0 0.0 4.7028 4.7028 69.913 0.0 0.0 0.0 7.433113505873585 -0.703941597644544 -0.703941597644544 1.7609125905568137 0 0.6237125054200234 0.958607314841775 0.7302046884880937 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}P{I|L}Q{M(Oxidation (M))|F}{I|L}VV;{[QN]|[E{I|L}]|[KN]}P{I|L}{M(Oxidation (M))|F}Q{I|L}VV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[QP]{I|L}{I|L}VV;{[QN]|[E{I|L}]|[KN]}P{I|L}[AG]{M(Oxidation (M))|F}{I|L}VV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}PQ{I|L}VV;{[QN]|[E{I|L}]|[KN]}P{I|L}{M(Oxidation (M))|F}[AG]{I|L}VV;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}T{[QN]|[E{I|L}]|[KN]};[EP]{I|L}{I|L}Q{M(Oxidation (M))|F}{I|L}VV;[EP]{I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}VV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}P[AG]{I|L}VV 4.7028;4.5361;4.3019;3.8313;3.8221;3.6646;3.57;3.134;2.9673;2.9506 -;-;-;-;-;-;-;-;-;- 340 1 1.471 52976.3 1.0 12841 5050 17890 HBL1_DMSO_200M_050219_2,17893 HBL1_DMSO_200M_050219_2,17893,MLQEPLLVV True False RIAELLTEL 95.457855 529.300219714642 16408017.0 17890.0 ENSG00000176476|ENST00000317058|SGF29;;ENST00000564682.5_1_16:28592390-28596314:+|nuORF;;ENST00000569581.1_1_16:28592390-28600520:+|nuORF 2.0544415712356567 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17894 95.46 71.0 908700.0 25 0 110060.0 + 2903 AVFPDDMPTL 10 87 553.2651345710362 1104.5157162088724 2 553.2657348513603 MULTI CID FTMS 0 0 0 17890 658930.5625 0.5960176915606783 -1 0.1245880126953125 4 Unmodified _AVFPDDMPTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 54.773552608820026 0.052133998764723 4 {[VA]|[{I|L}G]}[C(Carbamidomethyl (C))Q]WMPT{I|L} 9 4 {[VA]|[{I|L}G]}[C(Carbamidomethyl (C))Q]W + + 26.375 10.546 1.6369 2.3879 2.3879 44.971 0.0 0.0 0.0 0.0 0.1905270526792968 0.0 0.0 0 0.4247425010840047 0.0 0.6694451763165201 0.0 {[VA]|[{I|L}G]}[C(Carbamidomethyl (C))Q]WMPT{I|L} 2.3879 - 243 + 1 1.471 57978.2 1.0 12842 5050 17890 HBL1_DMSO_200M_050219_2,17894 HBL1_DMSO_200M_050219_2,17894,AVFPDDMPTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17895 95.462 111.0 1116300.0 25 0 121220.0 -1 0 63 751.6988142467638 2252.0746133404914 3 752.0342895388603 MULTI CID FTMS 0 0 0 17890 638156.0 1.0 0 0.0 5 4 A{[VA]|[{I|L}G]}A[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 11 -1 66.982 0.0 0.0 2.9742 0.0 0.0 1086.5414504556545 0.0 1086.5414504556545 0.0 59.99214827082543 0.0 0.0 0 1.5 0.0 0.8494850021680094 0.0 A{[VA]|[{I|L}G]}A[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.9742 - 155 1 1.471 101126.0 1.0 12843 5050 17890 HBL1_DMSO_200M_050219_2,17895 HBL1_DMSO_200M_050219_2,17895, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17896 95.463 65.0 1216800.0 25 0 133880.0 + + 22559 LPWLEARI 8 71 499.29549315281497 996.57643337243 2 499.2953674197197 MULTI CID FTMS 0 0 0 17890 607208.4375 0.7452243619442575 -1 0.1245880126953125 6 Unmodified _LPWRGGRR_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 24.67388899826682 0.525179942228231 4 {I|L}PW{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 8 -1 + 61.165 0.0 0.0 6.1375 6.1375 83.661 0.0 0.0 0.0 49.90544766465387 0.2211572911418358 0.2211572911418358 7.257724967479859 0 0.75 1.6989700043360187 0.0 0.0 {I|L}PW{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{I|L}P{I|L}WE{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{I|L}{I|L}PWE{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[WP]{I|L}[RN]RR;[{I|L}P]W[RN]RR 6.1375;5.4092;4.5529;3.0579;3.035 -;-;-;-;- 110 + 1 1.471 65233.9 1.0 12844 5050 17890 HBL1_DMSO_200M_050219_2,17896 HBL1_DMSO_200M_050219_2,17896,LPWRGGRR False False LPWLEARI 95.46348 499.29536741972 8345414.5 17890.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 3.2624632517496743 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17897 95.467 198.0 469670.0 25 0 35971.0 -1 0 76 771.36593400313 3081.43463014612 4 771.8680297732353 MULTI CID FTMS 0 0 0 17890 405052.9375 0.4130520782312719 -2 0.2038803100585937 7 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 56.309 0.0 0.0 1.8274 0.0 0.0 0.0 2040.821938365648 2040.821938365648 43.64516253185087 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8274 - 298 1 1.471 72495.7 1.0 12845 5050 17890 HBL1_DMSO_200M_050219_2,17897 HBL1_DMSO_200M_050219_2,17897, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17898 95.47 134.0 763110.0 25 0 103560.0 42873 VVLSAVVIIT 10 115 507.3346111639286 1012.6546693946572 2 507.3354369997978 MULTI CID FTMS 0 0 0 17890 414739.3125 0.7155595731635385 -1 0.1245880126953125 8 Unmodified _VVLSAVVIIT_ ENSG00000163399|ENST00000295598|ATP1A1;ENST00000463382.1_1_1:116929939-116930896:+|nuORF;nc|ENSG00000163399|P05023-2|ATP1A1;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1 61.357469665136826 0.0330252915653943 4 VV{[SA]|[TG]}{I|L}{I|L}TVV{I|L} 10 6 + 63.83 0.0 0.0 6.3032 6.3032 82.466 0.0 0.0 0.0 11.702458530741248 5.568109453757657 5.568109453757657 5.568109453757657 0 0.7429928190999391 2.0 1.3723637474483468 0.0 VV{[SA]|[TG]}{I|L}{I|L}TVV{I|L};VV{[SA]|[TG]}{I|L}{I|L}VV[{I|L}T];VV{[SA]|[TG]}{I|L}T{I|L}VV{I|L};VV{[SA]|[TG]}{I|L}{I|L}VTV{I|L};VV{I|L}{[SA]|[TG]}{I|L}TVV{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}TVV{I|L};{[TV]|[{I|L}S]}[VG]{I|L}{I|L}TVV{I|L};VV{I|L}{[SA]|[TG]}{I|L}VV[{I|L}T];VV{I|L}{[SA]|[TG]}T{I|L}VV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L}TVV{I|L} 6.3032;5.7533;5.7478;5.3548;5.3174;5.1476;4.8671;4.7676;4.762;4.6738 -;-;-;-;-;-;-;-;-;- 1509 1 1.471 81049.8 1.0 12846 5050 17890 HBL1_DMSO_200M_050219_2,17898 HBL1_DMSO_200M_050219_2,17898,VVLSAVVIIT True True VVLDKLITI 95.469995 507.335436999798 2471060.25 17890.0 ENST00000560334.5_1_15:79271198-79356973:-|nuORF;;ENSG00000058335|ENST00000558480|RASGRF1;;nc|ENSG00000058335|Q13972|RASGRF1 3.622523784637451 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17899 95.473 147.0 565660.0 25 0 38942.0 + -1 LPPDVWMKI 9 89 550.300497040935 1098.58644114867 2 549.8047973513603 MULTI CID FTMS 0 0 0 17890 335095.09375 0.3182851046611498 -4 0.3297805786132812 9 Carbamidomethyl (C) _PLC(Carbamidomethyl (C))LAAEGRL_ nc|ENSG00000170791|Q9BUK0-3|CHCHD7;nc|ENSG00000170791|Q9BUK0-5|CHCHD7 7.910154910731844 0.6900473968920092 4 [DP]VWMPK{[QV]|[N{I|L}]|[RA]|[KV]} 9 -1 + 29.332 0.0 0.0 2.6699 2.6699 66.295 0.0 0.0 0.0 3.256886463274288 1.273911989848532 1.273911989848532 3.0102999566398125 0 0.0 0.0 0.0 0.0 [DP]VWMPK{[QV]|[N{I|L}]|[RA]|[KV]};[DP]VWMKP{[QV]|[N{I|L}]|[RA]|[KV]};[DP]VWPMK{[QV]|[N{I|L}]|[RA]|[KV]};[DP]VPWMK{[QV]|[N{I|L}]|[RA]|[KV]};[WM][DV]PPK{[QV]|[N{I|L}]|[RA]|[KV]};[QT]P[NG]MPK{[QV]|[N{I|L}]|[RA]|[KV]};[DP]PVWMK{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}P]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}P{[QV]|[N{I|L}]|[RA]|[KV]};[WM][DV]PKP{[QV]|[N{I|L}]|[RA]|[KV]};{[RE]|[WV]}[DP]MPK{[QV]|[N{I|L}]|[RA]|[KV]} 2.6699;2.3959;2.2356;1.9616;1.5008;1.3626;1.3254;1.2372;1.2268;1.1234 -;-;-;-;-;-;-;-;-;- 629 1 1.471 73404.4 1.0 12847 5050 17890 HBL1_DMSO_200M_050219_2,17899 HBL1_DMSO_200M_050219_2,17899,PLCLAAEGRL False False LPPDVWMKI 95.472942 549.80479735136 19997500.0 17890.0 nc|ENSG00000170791|Q9BUK0-3|CHCHD7;;nc|ENSG00000170791|Q9BUK0-5|CHCHD7 4.8249405225118 2.0 False 9.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 17900 95.476 173.0 494290.0 25 0 60669.0 25238 MVLNYSRSL 9 112 541.7852311371149 1081.5559093410295 2 541.7858764529228 MULTI CID FTMS 0 0 0 17890 246079.140625 0.8163999342694238 -1 0.1245880126953125 10 Unmodified _MVLNYSRSL_ ENSG00000149428|ENST00000617285|HYOU1;ENST00000531694.5_1_11:118924831-118926006:-|nuORF;ENST00000543287.5_1_11:118919950-118926831:-|nuORF;nc|ENSG00000149428|Q9Y4L1-2|HYOU1 18.13498045792455 0.3457906370836843 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[YT]NVVV 9 6 + 20.964 0.0 0.0 1.9383 1.9383 68.523 0.0 0.0 0.0 4.825346240812465 1.655010192627131 1.655010192627131 4.827344480616915 0 0.805462187404089 0.0 0.0 0.4247425010840047 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[YT]NVVV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[ET]|[MV]}{M(Oxidation (M))|F}NVVV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[YT]GGVVV;[YV]Q[R{M(Oxidation (M))|F}]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[ET]|[MV]}{M(Oxidation (M))|F}GGVVV;[{I|L}P]KG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YN]{M(Oxidation (M))|F};[YV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VVV;[YV]Q[R{M(Oxidation (M))|F}][TA]VV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[YT][KG][EP];[Q{I|L}]{M(Oxidation (M))|F}[YT]NVVV 1.9383;1.492;1.0869;0.89372;0.64061;0.24423;0.21154;0.20016;0.11506;0.080281 -;-;-;-;-;-;-;-;-;- 625 1 1.471 69860.2 1.0 12848 5050 17890 HBL1_DMSO_200M_050219_2,17900 HBL1_DMSO_200M_050219_2,17900,MVLNYSRSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17901 95.48 178.0 456580.0 25 0 46757.0 + 25372 NAYFLLPKV 9 97 532.810682484293 1063.606812035386 2 532.8101074099541 MULTI CID FTMS 0 0 0 17890 221797.9375 0.7113831788627746 -1 0.1245880126953125 11 Unmodified _NAYFLLPKV_ ENSG00000121210|ENST00000409959|TMEM131L;ENST00000462540.1_1_4:154475378-154479541:+|nuORF;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L 36.12702656103203 0.0967173616627612 4 {[QG]|[NA]}Y{M(Oxidation (M))|F}{I|L}{I|L}PKV 9 0 + 70.908 0.0 0.0 6.6667 6.6667 86.785 0.0 0.0 0.0 57.09569063612989 9.621892823592972 9.621892823592972 8.750612633917001 0 0.805462187404089 2.0 0.0 0.0 + + {[QG]|[NA]}Y{M(Oxidation (M))|F}{I|L}{I|L}PKV;{[QG]|[NA]}Y{M(Oxidation (M))|F}{I|L}{I|L}KPV;{[QG]|[NA]}Y{M(Oxidation (M))|F}{I|L}{I|L}V[KP] 6.6667;5.844;5.6354 +;-;- + 157 + 1 1.471 69620.0 1.0 12849 5050 17890 HBL1_DMSO_200M_050219_2,17901 HBL1_DMSO_200M_050219_2,17901,NAYFLLPKV True True NAYFLLPKV 95.479788 532.810107409954 6038883.5 17890.0 nc|ENSG00000121210|A2VDJ0|TMEM131L;;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;;ENSG00000121210|ENST00000409959|TMEM131L;;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;;ENST00000462540.1_1_4:154475378-154479541:+|nuORF 7.897172768910726 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17902 95.488 488.0 257660.0 25 0 40988.0 + 22168 LPPVIPAL 8 106 410.2705822881041 818.5266116430082 2 410.2705261111259 MULTI CID FTMS 0 0 0 17890 186080.40625 0.6690443507652765 3 -0.2833328247070312 12 Unmodified _LPPVIPAL_ ENST00000209875.8_1_12:54634211-54634445:-|nuORF;ENST00000478443.1_1_17:20910052-20910178:-|nuORF 41.81723621529253 0.2038889569391319 4 [{I|L}P]PV{I|L} 5 3 39.437 0.0 0.0 4.818 0.0 0.0 0.0 296.16090931234913 296.16090931234913 21.02059991327962 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + [{I|L}P]PV{I|L} 4.818 + + 219 1 1.471 99866.6 1.0 12850 5050 17890 HBL1_DMSO_200M_050219_2,17902 HBL1_DMSO_200M_050219_2,17902,LPPVIPAL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17903 95.495 392.0 485500.0 25 0 48204.0 + 37560 TLIDLPGITRV 11 137 599.3637226945668 1196.7128924559336 2 599.3641235232353 MULTI CID FTMS 0 0 0 17890 156146.953125 0.1607711949077317 -2 0.2038803100585937 13 Unmodified _TLIDLPGITRV_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 53.31671820480216 0.0992620867501809 4 [{I|L}T]{I|L}D{I|L}V{[QS]|[NT]}{I|L}E 10 5 69.305 0.0 0.0 5.7913 0.0 0.0 0.0 82.06692682437733 82.06692682437733 49.99618491916924 0.0 0.0 0.0 0 0.5 2.0 1.208170666312956 0.3807196863200844 [{I|L}T]{I|L}D{I|L}V{[QS]|[NT]}{I|L}E 5.7913 - 3779 + 1 1.471 140573.4 1.0 12851 5050 17890 HBL1_DMSO_200M_050219_2,17903 HBL1_DMSO_200M_050219_2,17903,TLIDLPGITRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17904 95.509 800.0 181290.0 25 0 20301.0 + 34930 SQIREMETLIL 11 113 666.8636789827331 1331.712805032266 2 666.8649169802666 MULTI CID FTMS 0 0 0 17890 123669.609375 0.6199714518086148 -1 0.1245880126953125 14 Unmodified _SQIREMETLIL_ ENSG00000157456|ENST00000288207|CCNB2 36.39500950444726 0.267929034476522 4 [{I|L}T][RN]EMET{I|L}{I|L}{I|L} 11 3 + 78.835 0.0 0.0 5.9198 5.9198 77.339 0.0 0.0 0.0 7.723029143342018 16.57577319177794 7.723029143342018 3.0102999566398125 0 1.2614393726401687 1.6989700043360187 0.9802046884880936 0.0 [{I|L}T][RN]EMET{I|L}{I|L}{I|L};[{I|L}T][RN]EMTE{I|L}{I|L}{I|L};[{I|L}T]{[RE]|[WV]}MENT{I|L}{I|L}{I|L};{[QS]|[NT]}S{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}TNT{I|L}{I|L}{I|L};[{I|L}T]C[VG]{[QG]|[NA]}TNT{I|L}{I|L}{I|L};[{I|L}T]C[VP][{M(Oxidation (M))|F}V]NT{I|L}{I|L}{I|L};[{I|L}T]{[RE]|[WV]}MNET{I|L}{I|L}{I|L};[{I|L}T]{[RE]|[WV]}NMET{I|L}{I|L}{I|L};[{I|L}T]{[RE]|[WV]}MEGGT{I|L}{I|L}{I|L};[{I|L}T]{[RE]|[WV]}MNTE{I|L}{I|L}{I|L} 5.9198;5.6938;5.4849;5.3399;5.183;5.0635;4.9772;4.9174;4.7995;4.7512 -;-;-;-;-;-;-;-;-;- 2525 1 1.471 117677.7 0.5699999928474426 12852 5050 17890 HBL1_DMSO_200M_050219_2,17904 HBL1_DMSO_200M_050219_2,17904,SQIREMETLIL False True SQIREMETLIL 95.509257 666.864916980267 1594909.75 17890.0 ENSG00000157456|ENST00000288207|CCNB2 4.786263147989909 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17905 95.523 800.0 252770.0 25 0 14072.0 -1 0 125 1028.1517806495303 3081.4335125487914 3 1028.488940417767 MULTI CID FTMS 0 0 0 17890 113634.7578125 0.4640388342650746 -1 0.1245880126953125 15 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 77.885 0.0 0.0 2.5276 0.0 0.0 0.0 2040.823568473212 2040.823568473212 39.87002527416834 0.0 0.0 0.0 0 2.3807196863200843 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.5276 - 1711 1 1.471 132169.6 0.6399999856948853 12853 5050 17890 HBL1_DMSO_200M_050219_2,17905 HBL1_DMSO_200M_050219_2,17905, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17906 95.537 800.0 244580.0 25 0 29363.0 + 12699 GVLPQLSMV 9 164 472.267880154047 942.521207374894 2 472.2686645388603 MULTI CID FTMS 0 0 0 17890 116092.546875 0.85332706252035 -1 0.1245880126953125 16 Unmodified _GVLPQLSMV_ ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF 37.97399986684836 0.0865783450051559 4 [QP]{I|L}SM 5 4 37.285 0.0 0.0 3.9559 0.0 0.0 0.0 383.23059393178784 383.23059393178784 10.94687302525001 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.7134679910804405 0.3494850021680094 + [QP]{I|L}SM 3.9559 + + 1697 1 1.471 152197.2 0.4300000071525574 12854 5050 17890 HBL1_DMSO_200M_050219_2,17906 HBL1_DMSO_200M_050219_2,17906,GVLPQLSMV True True GVLPQLSMV 95.536936 472.26866453886 1611084.625 17890.0 ENST00000477668.5_1_3:127323572-127337961:+|nuORF;;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2 4.266490697860718 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17907 95.552 800.0 195000.0 25 0 18994.0 + 43879 YFPDYSIGNL 10 125 1188.5572521178683 1187.5499756512684 1 1188.558886706829 MULTI CID FTMS 0 0 0 17890 84408.9140625 0.7127983643891793 -1 0.1245880126953125 17 Unmodified _YFPDYSIGNL_ ENSG00000164815|ENST00000297431|ORC5;ENST00000463152.5_1_7:103824789-103838202:-|nuORF;ENST00000485726.1_1_7:103828364-103848439:-|nuORF;nc|ENSG00000164815|O43913-2|ORC5 117.7605887643192 0.0007874417321281 4 [DP]Y{M(Oxidation (M))|F}YS{I|L}GN{I|L} 10 4 + 76.266 0.0 0.0 6.4221 6.4221 77.55 0.0 0.0 0.0 9.32975913172342 33.354706403678875 9.32975913172342 2.0597718523607966 0 1.2856668758921828 0.0 1.305462187404089 0.0 [DP]Y{M(Oxidation (M))|F}YS{I|L}GN{I|L};[DP]YS{M(Oxidation (M))|F}Y{I|L}GN{I|L};[DP]YSY{M(Oxidation (M))|F}{I|L}GN{I|L};[DP]Y{M(Oxidation (M))|F}SY{I|L}GN{I|L};[DP]{M(Oxidation (M))|F}YYS{I|L}GN{I|L};[DP]YY{M(Oxidation (M))|F}S{I|L}GN{I|L};[DP]YS{I|L}Y{M(Oxidation (M))|F}GN{I|L};[DP]Y{M(Oxidation (M))|F}YS{I|L}GGG{I|L};[DP]YS{M(Oxidation (M))|F}Y{I|L}GGG{I|L};[Y{M(Oxidation (M))|F}][DP]YS{I|L}GN{I|L} 6.4221;6.2487;5.8309;5.7835;5.7669;5.7261;5.7005;5.6504;5.477;5.2642 -;-;-;-;-;-;-;-;-;+ + 8991 1 1.471 96579.1 0.5199999809265137 12855 5050 17890 HBL1_DMSO_200M_050219_2,17907 HBL1_DMSO_200M_050219_2,17907,YFPDYSIGNL True True YFPDYSIGNL 95.552282 1188.55888670683 2510702.5 17890.0 nc|ENSG00000164815|O43913-2|ORC5;;ENST00000485726.1_1_7:103828364-103848439:-|nuORF;;ENST00000463152.5_1_7:103824789-103838202:-|nuORF;;ENSG00000164815|ENST00000297431|ORC5 7.57213020324707 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17909 95.557 45.0 800970.0 25 0 77729.0 + 10261 FQVGDGIGMDL 11 67 576.2728215225617 1150.5310901119233 2 576.2740966677666 MULTI CID FTMS 0 0 0 17908 720926.625 0.6226656971612817 1 -0.1099166870117187 1 Unmodified _FQVGDGIGMDL_ ENSG00000101782|ENST00000339486|RIOK3;ENST00000581302.5_1_18:21033283-21057068:+|nuORF;ENST00000584992.1_1_18:21044583-21047491:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3 16.149105407346934 0.6992268271266642 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 9 + 22.738 0.0 0.0 1.9763 1.9763 70.364 0.0 0.0 0.0 4.009461452434241 3.925449767853312 3.925449767853312 6.53212513775344 0 0.0 0.0 0.0 0.2614393726401688 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{[ET]|[MV]}{[WN]|[YH]}D{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[YT][DG]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{[ET]|[MV]}[DG]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[YT][RD]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{[ET]|[MV]}[RD]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 1.9763;1.4085;0.76124;0.4996;0.45514;0.19349 -;-;-;-;-;- 113 + 1 1.475 35639.8 1.0 12856 5051 17908 HBL1_DMSO_200M_050219_2,17909 HBL1_DMSO_200M_050219_2,17909,FQVGDGIGMDL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17910 95.559 44.0 1574900.0 25 0 162250.0 31880 RTLGLFQH 8 83 486.2768309585354 970.539108983871 2 486.2765380740166 MULTI CID FTMS 0 0 0 17908 1023040.3125 0.6817165803365168 -5 0.43170166015625 2 Unmodified _RTLGLFQH_ ENSG00000196547|ENST00000559717|MAN2A2;ENST00000560192.5_1_15:91447248-91454469:+|nuORF;nc|ENSG00000196547|P49641-1|MAN2A2;nc|ENSG00000196547|P49641-2|MAN2A2 25.399314129420983 0.5099049743284904 4 WP{M(Oxidation (M))|F}{I|L} 4 7 51.859 0.0 0.0 5.3434 0.0 0.0 0.0 424.2317300606381 424.2317300606381 30.08839563816037 0.0 0.0 0.0 0 0.5941876774005248 1.3979400086720375 0.0 0.0 WP{M(Oxidation (M))|F}{I|L} 5.3434 - 97 + 1 1.475 59995.0 1.0 12857 5051 17908 HBL1_DMSO_200M_050219_2,17910 HBL1_DMSO_200M_050219_2,17910,RTLGLFQH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17911 95.56 32.0 2398600.0 25 0 220980.0 + 1928 AMIELVERL 9 66 537.3047640918295 1072.594975250459 2 537.3051025271416 MULTI CID FTMS 0 0 0 17908 1707536.625 0.9217029466400094 -1 0.1019210815429687 3 Unmodified _AMIELVERL_ ENSG00000166326|ENST00000299413|TRIM44 43.77239144664712 0.0547478964384323 4 {[DS]|[MA]|[CV]|TT}{I|L}E{I|L}VER{I|L} 9 0 + 81.877 0.0 0.0 7.6335 7.6335 83.942 0.0 0.0 0.0 55.32328870566076 11.655462488490684 11.655462488490684 3.450528104279016 0 1.274227503252014 2.0 0.4247425010840047 0.3494850021680094 + + {[DS]|[MA]|[CV]|TT}{I|L}E{I|L}VER{I|L};{[DS]|[MA]|[CV]|TT}{I|L}{I|L}EVER{I|L};{[DS]|[MA]|[CV]|TT}{I|L}E{I|L}{I|L}DR{I|L};{[DS]|[MA]|[CV]|TT}{I|L}{I|L}E{I|L}DR{I|L} 7.6335;7.3118;7.1887;6.867 +;-;-;- + 136 + 1 1.475 63458.2 1.0 12858 5051 17908 HBL1_DMSO_200M_050219_2,17911 HBL1_DMSO_200M_050219_2,17911,AMIELVERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17912 95.561 68.0 943000.0 25 0 115650.0 + 11514 GIMDRFLQV 9 97 539.7894454689488 1077.5643380046974 2 539.7899658083916 MULTI CID FTMS 0 0 0 17908 591418.25 0.5458047972860108 -1 0.1019210815429687 4 Unmodified _GIMDRFLQV_ ENSG00000157456|ENST00000288207|CCNB2 55.50274090549119 0.0285720310785888 4 {NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{M(Oxidation (M))|F}{I|L}G{I|L}QV 10 6 + 48.888 0.0 0.0 4.5369 4.5369 78.232 0.0 0.0 0.0 7.724347569416309 18.20147157201683 7.724347569416309 8.750612633917001 0 0.6382104921644451 0.8860566476931632 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{M(Oxidation (M))|F}{I|L}G{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{M(Oxidation (M))|F}{I|L}GAG{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{M(Oxidation (M))|F}{I|L}G{I|L}[AG]V;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{M(Oxidation (M))|F}{I|L}GQ{I|L}V;{[QN]|[E{I|L}]|[KN]}Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{I|L}QV;{[QN]|[E{I|L}]|[KN]}Y[SG]{I|L}G{I|L}QV;{[TV]|[{I|L}S]}WW{M(Oxidation (M))|F}{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{M(Oxidation (M))|F}{I|L}QG{I|L}V;{[QN]|[E{I|L}]|[KN]}Y[WQ]{I|L}QV 4.5369;3.7248;3.7054;3.6864;3.6538;3.5512;3.5087;3.1277;3.0951;2.95 -;-;-;-;-;-;-;-;-;- 359 1 1.475 59305.4 1.0 12859 5051 17908 HBL1_DMSO_200M_050219_2,17912 HBL1_DMSO_200M_050219_2,17912,GIMDRFLQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17913 95.564 131.0 1225100.0 25 0 176360.0 -1 0 112 946.4345463543174 1890.854539775435 2 946.4359619021416 MULTI CID FTMS 0 0 0 17908 523603.5 1.0 0 0.0 5 4 [{I|L}P]T{[SA]|[TG]}{M(Oxidation (M))|F}P{I|L}T 9 -1 22.008 0.0 0.0 1.1639 0.0 0.0 0.0 960.3073955706096 960.3073955706096 8.063416410328543 0.0 0.0 0.0 0 0.0 0.958607314841775 1.3996498648046138 0.0 [{I|L}P]T{[SA]|[TG]}{M(Oxidation (M))|F}P{I|L}T 1.1639 - 393 1 1.475 109419.7 1.0 12860 5051 17908 HBL1_DMSO_200M_050219_2,17913 HBL1_DMSO_200M_050219_2,17913, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17914 95.567 163.0 738910.0 25 0 48261.0 -1 0 89 641.3183258915934 2561.244197699973 4 641.5694457888603 MULTI CID FTMS 0 0 0 17908 425136.875 0.5166411998987102 -1 0.1019210815429687 6 4 [H{I|L}]VEAY{M(Oxidation (M))|F}C(Carbamidomethyl (C))C(Carbamidomethyl (C))AAAMV 14 -1 56.881 0.0 0.0 2.2208 0.0 0.0 0.0 935.4982450865708 935.4982450865708 30.25411489917324 0.0 0.0 0.0 0 0.5 1.154901959985743 1.274227503252014 0.0 [H{I|L}]VEAY{M(Oxidation (M))|F}C(Carbamidomethyl (C))C(Carbamidomethyl (C))AAAMV 2.2208 - 969 1 1.475 97839.3 1.0 12861 5051 17908 HBL1_DMSO_200M_050219_2,17914 HBL1_DMSO_200M_050219_2,17914, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17915 95.571 187.0 436390.0 25 0 62352.0 + 37241 TILNTLQNI 9 126 515.3002906244265 1028.5860283156528 2 515.3010742068291 MULTI CID FTMS 0 0 0 17908 291709.21875 0.805068344644331 -1 0.1019210815429687 7 Unmodified _TILNTLQNI_ ENSG00000239900|ENST00000623063|ADSL;nc|ENSG00000239900|P30566-2|ADSL 96.28474662873226 0.0124266067997264 4 [{I|L}T]N{I|L}T{I|L} 6 4 69.26 0.0 0.0 6.7335 0.0 0.0 0.0 370.1693772748904 370.1693772748904 38.095295363281615 0.0 0.0 0.0 0 0.3054621874040891 2.0 1.8684151806525389 0.9896518287104438 [{I|L}T]N{I|L}T{I|L} 6.7335 - 1808 1 1.475 65260.1 1.0 12862 5051 17908 HBL1_DMSO_200M_050219_2,17915 HBL1_DMSO_200M_050219_2,17915,TILNTLQNI True True TILNTLQNI 95.570915 515.301074206829 3000909.75 17908.0 nc|ENSG00000239900|P30566-2|ADSL;;ENSG00000239900|ENST00000623063|ADSL 4.762246370315552 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17916 95.579 465.0 250860.0 25 0 20859.0 + 33488 SIIEYLPTLR 10 94 602.8509098868194 1203.6872668404387 2 602.8508788943291 MULTI CID FTMS 0 0 0 17908 243568.203125 0.653189289220316 2 -0.1814117431640625 8 Unmodified _SIIEYLPTLR_ ENSG00000176208|ENST00000321990|ATAD5 71.70789743142352 0.0188816056000227 4 {[TV]|[{I|L}S]}{I|L}EY{I|L}P[{I|L}T]R 10 0 + 85.556 0.0 0.0 7.1078 7.1078 95.494 0.0 0.0 0.0 71.57673934921631 12.781760700478216 12.781760700478216 85.55613943593669 0 1.274227503252014 2.0 0.7134679910804405 0.805462187404089 + + {[TV]|[{I|L}S]}{I|L}EY{I|L}P[{I|L}T]R 7.1078 + + 244 + 1 1.475 88093.3 1.0 12863 5051 17908 HBL1_DMSO_200M_050219_2,17916 HBL1_DMSO_200M_050219_2,17916,SIIEYLPTLR True True SIIEYLPTLR 95.579163 602.850878894329 7897786.5 17908.0 ENSG00000176208|ENST00000321990|ATAD5 8.645000139872232 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17917 95.593 800.0 323770.0 25 0 24798.0 + + -1 LPRLTPPVLEEM 12 122 697.8886475559414 1393.7627421786826 2 697.8898803591728 MULTI CID FTMS 0 0 0 17908 226835.8125 1.0 0 0.0 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LKLRLPHCLEM_ nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;ENSG00000156261|ENST00000286788|CCT8 15.248480904072842 0.7179608125786238 4 {[QN]|[E{I|L}]|[KN]}P{I|L}KPPV{I|L}EEM 12 -1 + 97.015 0.0 0.0 6.9606 6.9606 87.436 0.0 0.0 0.0 11.760912590556812 16.611814434466197 11.760912590556812 8.02378753635658 0 2.149649864804614 1.2218487496163564 0.6747425010840047 0.0 {[QN]|[E{I|L}]|[KN]}P{I|L}KPPV{I|L}EEM;{[QN]|[E{I|L}]|[KN]}P{I|L}KPPVE{I|L}EM;[{I|L}P]E{I|L}KPPV{I|L}EEM;[{I|L}P]E{I|L}KPPVE{I|L}EM;[{I|L}P]R[{I|L}T]PPV{I|L}EEM;{[QN]|[E{I|L}]|[KN]}P{I|L}KPPV{I|L}T[C(Carbamidomethyl (C))Q];[VP][KQ]KPPV{I|L}EEM;[{I|L}P]R[{I|L}T]PPVE{I|L}EM;[{I|L}P]VPRPT{I|L}{I|L}EEM;[VP]P{I|L}RPT{I|L}{I|L}EEM 6.9606;6.385;6.1168;5.5411;5.489;5.0058;5.0014;4.9133;4.6288;4.5358 -;-;-;-;-;-;-;-;-;- 2293 1 1.475 185039.6 0.800000011920929 12864 5051 17908 HBL1_DMSO_200M_050219_2,17917 HBL1_DMSO_200M_050219_2,17917,LKLRLPHCLEM False False LPRLTPPVLEEM 95.592994 697.889880359173 14074707.0 17908.0 nc|ENSG00000156261|P50990-2|CCT8;;nc|ENSG00000156261|P50990-3|CCT8;;ENST00000475205.1_1_21:30434643-30435788:-|nuORF;;ENSG00000156261|ENST00000286788|CCT8 8.9540163675944 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17918 95.601 449.0 542790.0 25 0 45931.0 + 9965 FPGLAIKI 8 107 429.77601453505866 857.5374761369173 2 429.7760497927666 MULTI CID FTMS 0 0 0 17908 205100.953125 0.0180801406775622 -5 0.43170166015625 10 Unmodified _FPGLAIKI_ ENSG00000142945|ENST00000372224|KIF2C;ENST00000455186.5_1_1:45205634-45205691:+|nuORF;ENST00000493027.5_1_1:45205556-45221765:+|nuORF 98.80718514221952 0.0867704633024581 4 {I|L}MG{I|L}A{I|L}K{I|L} 8 2 + 73.296 0.0 0.0 8.5473 8.5473 86.218 0.0 0.0 0.0 7.971062485323529 3.802112417116064 3.802112417116064 3.802112417116064 0 1.5378603569690592 1.5228787452803376 0.0 0.2614393726401688 {I|L}MG{I|L}A{I|L}K{I|L};{I|L}MG{I|L}A{I|L}{I|L}K;{I|L}M{I|L}GA{I|L}K{I|L};{I|L}M{I|L}GA{I|L}{I|L}K;{M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L};{I|L}M{I|L}Q{I|L}K{I|L};{M(Oxidation (M))|F}PG{I|L}A{I|L}{I|L}K;{M(Oxidation (M))|F}{I|L}PGA{I|L}K{I|L};{M(Oxidation (M))|F}P{I|L}GA{I|L}K{I|L};{I|L}M{I|L}Q{I|L}{I|L}K 8.5473;8.1039;8.0649;7.6215;7.6177;7.3487;7.1744;7.1497;7.1354;6.9053 -;-;-;-;+;-;-;-;-;- + 426 + 1 1.475 187525.5 1.0 12865 5051 17908 HBL1_DMSO_200M_050219_2,17918 HBL1_DMSO_200M_050219_2,17918,FPGLAIKI True True FPGLAIKI 95.60096 429.776049792767 334430944.0 17908.0 ENSG00000142945|ENST00000372224|KIF2C;;ENST00000493027.5_1_1:45205556-45221765:+|nuORF;;ENST00000455186.5_1_1:45205634-45205691:+|nuORF 3.973644733428955 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17919 95.615 800.0 230520.0 25 0 15362.0 + 43878 YFPDYSIGNL 10 151 594.7813257044941 1187.548098475788 2 594.7822143435478 MULTI CID FTMS 0 0 0 17908 181740.921875 0.4959405629547663 7 -0.5138320922851562 11 Unmodified _YFPDYSIGNL_ ENSG00000164815|ENST00000297431|ORC5;ENST00000463152.5_1_7:103824789-103838202:-|nuORF;ENST00000485726.1_1_7:103828364-103848439:-|nuORF;nc|ENSG00000164815|O43913-2|ORC5 39.957323273325 0.1580177220464651 4 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}S{I|L}GN{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E] 10 7 + 42.548 0.0 0.0 3.5828 3.5828 63.543 0.0 0.0 0.0 0.5105861685896329 0.0 0.0 0.5105861685896329 0 0.2614393726401688 1.0457574905606752 1.089136830878453 0.5731074559755159 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}S{I|L}GN{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];[DP]YS{I|L}GN{M(Oxidation (M))|F}[Y{I|L}];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}D{I|L}GN{M(Oxidation (M))|F}[Y{I|L}];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}S{I|L}GD[HT][{I|L}A];[DP]YS{I|L}GD[HT][{I|L}A];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}S{I|L}GGG{M(Oxidation (M))|F}[Y{I|L}];[DP]YS{I|L}GGG{M(Oxidation (M))|F}[Y{I|L}];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}D{I|L}GD[HT][{I|L}A];{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{M(Oxidation (M))|F}[Y{I|L}];[DP]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{M(Oxidation (M))|F}[Y{I|L}] 3.5828;3.5398;3.0201;2.926;2.8831;2.8111;2.4475;2.3633;2.049;2.006 -;-;-;-;-;-;-;-;-;- 1608 1 1.475 138392.9 0.6899999976158142 12866 5051 17908 HBL1_DMSO_200M_050219_2,17919 HBL1_DMSO_200M_050219_2,17919,YFPDYSIGNL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17920 95.619 220.0 333580.0 25 0 50743.0 + 31874 RTLDFDPLL 9 94 545.3008506461704 1088.5871483591409 2 545.3005248904228 MULTI CID FTMS 0 0 0 17908 173067.390625 0.2699692639562804 -3 0.3058013916015625 12 Unmodified _RTLDFDPLL_ ENSG00000135334|ENST00000257787|AKIRIN2 29.84058131909904 0.1515068451768857 4 [{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}DP{I|L}{I|L} 9 4 + 74.816 0.0 0.0 6.8727 6.8727 94.167 0.0 0.0 0.0 17.727562184969372 52.50869542769378 17.727562184969372 49.91156026441961 0 1.2134679910804405 1.6989700043360187 0.3807196863200844 0.0 [{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}DP{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}E{I|L}[RD]{I|L}{I|L} 6.8727;2.2878 -;- 173 1 1.475 66301.2 1.0 12867 5051 17908 HBL1_DMSO_200M_050219_2,17920 HBL1_DMSO_200M_050219_2,17920,RTLDFDPLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17921 95.624 193.0 279310.0 25 0 35643.0 22695 LQDYNLQIL 9 90 560.3057069882877 1118.5968610433754 2 560.3058959841728 MULTI CID FTMS 0 0 0 17908 175620.21875 0.7273060581390902 -1 0.1019210815429687 13 Unmodified _LQDYNLQIL_ ENSG00000006715|ENST00000310301|VPS41;nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41 30.63653989081413 0.1413794767160703 4 PY 2 8 20.969 0.0 0.0 1.8746 0.0 0.0 0.0 855.4578341119749 855.4578341119749 2.776880353615212 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PY 1.8746 - 202 + 1 1.475 47560.0 1.0 12868 5051 17908 HBL1_DMSO_200M_050219_2,17921 HBL1_DMSO_200M_050219_2,17921,LQDYNLQIL False True VQLQDYIQL 95.623835 560.305895984173 3278532.0 17908.0 nc|ENSG00000030066|Q12769|NUP160;;ENSG00000030066|ENST00000378460|NUP160 3.023110906283061 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17922 95.631 419.0 551740.0 25 0 35046.0 -1 0 131 854.7556543251478 2561.245133575643 3 855.0886718630791 MULTI CID FTMS 0 0 0 17908 159873.140625 0.3821366302238334 -1 0.1019210815429687 14 4 H{I|L}VEA{I|L}Y{I|L}V 9 -1 91.737 0.0 0.0 3.5817 0.0 0.0 0.0 1520.6513155572875 1520.6513155572875 40.1192859056523 0.0 0.0 0.0 0 3.667735320183944 1.5228787452803376 0.4247425010840047 0.0 H{I|L}VEA{I|L}Y{I|L}V 3.5817 - 13537 + 1 1.475 154991.6 1.0 12869 5051 17908 HBL1_DMSO_200M_050219_2,17922 HBL1_DMSO_200M_050219_2,17922, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17923 95.645 800.0 193290.0 25 0 21497.0 + 12776 GVPQALFGV 9 115 887.498698680055 886.4914222134549 1 887.4988891482353 MULTI CID FTMS 0 0 0 17908 140915.703125 0.0100996748414029 21 -2.161163330078125 15 Unmodified _GVPQALFGV_ ENSG00000010292|ENST00000315579|NCAPD2 48.345845343767074 0.0439967357579942 4 [QP]A{I|L}GV{M(Oxidation (M))|F}GV 9 4 + 58.836 0.0 0.0 6.6369 6.6369 83.851 0.0 0.0 0.0 10.457574905606748 45.04940636348586 10.457574905606748 5.708705367622429 0 0.3252574989159953 0.0 0.0 0.6989700043360187 [QP]A{I|L}GV{M(Oxidation (M))|F}GV;[QP]AGV{I|L}{M(Oxidation (M))|F}GV;[QP]A{I|L}{M(Oxidation (M))|F}GVGV;[QP]AG{I|L}V{M(Oxidation (M))|F}GV;[QP]A{I|L}G{M(Oxidation (M))|F}VGV;[QP]QV{I|L}{M(Oxidation (M))|F}GV;[QP]Q{I|L}V{M(Oxidation (M))|F}GV;[QP]AG{I|L}{M(Oxidation (M))|F}VGV;[QP][VG]A{I|L}{M(Oxidation (M))|F}GV;[QP]AGV{M(Oxidation (M))|F}{I|L}GV 6.6369;5.993;5.8066;5.6836;5.5362;5.2622;4.9529;4.5829;4.3405;4.2785 -;-;-;-;-;-;-;-;-;- 1464 1 1.475 102832.2 0.550000011920929 12870 5051 17908 HBL1_DMSO_200M_050219_2,17923 HBL1_DMSO_200M_050219_2,17923,GVPQALFGV True True GVPQALFGV 95.645177 887.498889148235 0.0 17908.0 ENSG00000010292|ENST00000315579|NCAPD2 5.600592454274495 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17924 95.656 615.0 190580.0 25 0 15882.0 + 876 AEVDVNQKLLL 11 151 621.3575757175456 1240.7005985018911 2 621.3585693240166 MULTI CID FTMS 0 0 0 17908 102955.671875 0.001722161169531 37 -2.6781158447265625 16 Unmodified _AEVDVNQKLLL_ REV__ENSG00000101752|ENST00000261537|MIB1;REV__ENST00000577749.5_1_18:19378098-19392361:+|nuORF 21.59015148037692 0.5852593066373742 4 {NN|[MP]|[D{I|L}]|[EV]}ADVAK[NG]{I|L}{I|L}{I|L} 12 -1 + 43.167 0.0 0.0 3.4792 3.4792 66.231 0.0 0.0 0.0 2.013472901558736 0.8715017571889874 0.8715017571889874 2.013472901558736 0 1.6989700043360187 0.744727494896694 0.4838855026932703 0.0 {NN|[MP]|[D{I|L}]|[EV]}ADVAK[NG]{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}DVAK[NG]{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}{I|L}AVDEG{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVAV{[TV]|[{I|L}S]}{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVAK{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}{I|L};{[DA]|[EG]}{I|L}DVAV{[TV]|[{I|L}S]}{I|L}{I|L}{I|L};{[DA]|[EG]}{I|L}DVAK{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}{I|L}AVDW{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVAK{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADVAV[KQ]G{I|L}{I|L} 3.4792;3.3169;3.2078;3.1975;3.1871;3.0352;3.0248;2.967;2.9463;2.9054 -;-;-;-;-;-;-;-;-;- 14604 1 1.475 87048.4 1.0 12871 5051 17908 HBL1_DMSO_200M_050219_2,17924 HBL1_DMSO_200M_050219_2,17924,AEVDVNQKLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17925 95.662 342.0 239310.0 25 0 42505.0 + 18918 LAYNEIITI 9 118 525.29742350292 1048.5802940726398 2 525.2985107302666 MULTI CID FTMS 0 0 0 17908 112818.5 0.9189182413069326 -1 0.1019210815429687 17 Unmodified _LAYNEIITI_ ENSG00000278540|ENST00000616317|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085|ACACA 48.345845343767074 0.0439967357579942 4 {[QN]|[E{I|L}]|[KN]}GGYRKN{I|L} 9 7 + 45.517 0.0 0.0 4.3408 4.3408 71.803 0.0 0.0 0.0 13.34044585199166 23.75115312462057 13.34044585199166 3.4678748622465605 0 0.3182503180159344 1.5228787452803376 0.3054621874040891 0.5 {[QN]|[E{I|L}]|[KN]}GGYRKN{I|L};{[QN]|[E{I|L}]|[KN]}NYRKN{I|L};[{I|L}A]YNT{I|L}KN{I|L};[{I|L}A]GM{M(Oxidation (M))|F}RKN{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}YRKN{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}RKN{I|L};[{I|L}A]YNTK{I|L}N{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}NT{I|L}KN{I|L};{[QN]|[E{I|L}]|[KN]}G{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}N{I|L};[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}RKN{I|L} 4.3408;4.0101;2.653;2.5429;2.3462;2.342;2.0082;1.9033;1.8549;1.6923 -;-;-;-;-;-;-;-;-;- 997 1 1.475 68648.3 1.0 12872 5051 17908 HBL1_DMSO_200M_050219_2,17925 HBL1_DMSO_200M_050219_2,17925,LAYNEIITI True True LAYNEIITI 95.662135 525.298510730267 1301354.125 17908.0 nc|ENSG00000278540|Q13085-2|ACACA;;nc|ENSG00000278540|Q13085|ACACA;;nc|ENSG00000278540|Q13085-3|ACACA;;ENSG00000278540|ENST00000616317|ACACA 1.7922900120417278 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17927 95.667 34.0 1798500.0 25 0 217550.0 + 18298 KVLDFEHFL 9 93 574.3107147304196 1146.606876527639 2 574.3112060427666 MULTI CID FTMS 0 0 0 17926 1113934.375 0.2644792520541977 2 -0.1597442626953125 1 Unmodified _KVLDFEHFL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 53.31671820480216 0.0330978755772958 4 KV{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L} 9 0 + 90.989 0.0 0.0 7.9355 7.9355 94.209 0.0 0.0 0.0 60.97495754813579 9.665762445130497 9.665762445130497 13.45098040014257 0 2.5669015600442577 1.0969100130080565 0.5 0.0 + + KV{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};KV{I|L}D{M(Oxidation (M))|F}E{M(Oxidation (M))|F}H{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}ED{I|L}VK{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}D{I|L}VK{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}E{[TV]|[{I|L}S]}V[VG]{M(Oxidation (M))|F}{I|L} 7.9355;6.7624;3.4172;2.2216;1.959;0.1808 +;-;+;-;-;- + 319 + 1 1.475 52515.2 1.0 12873 5052 17926 HBL1_DMSO_200M_050219_2,17927 HBL1_DMSO_200M_050219_2,17927,KVLDFEHFL True True KVLDFEHFL 95.666935 574.311206042767 78911746.0 17926.0 ENST00000548725.5_1_12:56552185-56553955:+|nuORF;;ENSG00000092841|ENST00000550697|MYL6;;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;;nc|ENSG00000092841|P60660-2|MYL6 8.567968050638834 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17928 95.668 40.0 1438100.0 25 0 205790.0 + 9743 FMFDEKLVTV 10 68 614.8177598867569 1227.6209668403137 2 614.8181640505791 MULTI CID FTMS 0 0 0 17926 1157241.75 0.7177532627653886 1 -0.0714950561523437 2 Unmodified _FMFDEKLVTV_ ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-2|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C 38.61474834105838 0.1721950110283317 4 {[TV]|[{I|L}S]}GD{M(Oxidation (M))|F}{I|L}VM{M(Oxidation (M))|F}{[TV]|[{I|L}S]} 11 7 + 49.879 0.0 0.0 4.063 4.063 66.712 0.0 0.0 0.0 5.960547908400656 1.3772686722014529 1.3772686722014529 1.3772686722014529 0 0.3807196863200844 1.154901959985743 0.7134679910804405 0.0 {[TV]|[{I|L}S]}GD{M(Oxidation (M))|F}{I|L}VM{M(Oxidation (M))|F}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}GD{M(Oxidation (M))|F}{I|L}VTM{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}VM{M(Oxidation (M))|F}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}GD{I|L}{M(Oxidation (M))|F}VM{M(Oxidation (M))|F}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}VTM{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}GD{M(Oxidation (M))|F}{I|L}M{M(Oxidation (M))|F}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}GD{I|L}{M(Oxidation (M))|F}VTM{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}GD{M(Oxidation (M))|F}{I|L}VTV{[YD]|[{M(Oxidation (M))|F}M]};{[{M(Oxidation (M))|F}D]|MM}EK{I|L}VM{M(Oxidation (M))|F}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}G{I|L}D{M(Oxidation (M))|F}M{M(Oxidation (M))|F}V{[TV]|[{I|L}S]} 4.063;3.9509;3.9196;3.8178;3.8074;3.7161;3.7056;3.6511;3.5775;3.5726 -;-;-;-;-;-;-;-;-;- 1091 1 1.475 48636.3 1.0 12874 5052 17926 HBL1_DMSO_200M_050219_2,17928 HBL1_DMSO_200M_050219_2,17928,FMFDEKLVTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17929 95.669 29.0 2051200.0 25 0 158230.0 + 44769 YPLQGPGLLSV 11 93 572.3230653247996 1142.631577716399 2 572.3240844607353 MULTI CID FTMS 0 0 0 17926 1469317.0 0.7700029844934733 4 -0.2714080810546875 3 Unmodified _YPLQGPGLLSV_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 37.77132515983256 0.2467275698964582 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QG[PG]{I|L}{I|L}SV 11 0 + 44.729 0.0 0.0 3.9145 3.9145 64.756 0.0 0.0 0.0 1.7179150495836026 1.7179150495836026 1.7179150495836026 0.5551732784983088 0 0.8182503180159344 1.154901959985743 0.0 0.3807196863200844 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QG[PG]{I|L}{I|L}SV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}Q[NP]{I|L}{I|L}SV;[VS]QQ{I|L}[RN]{I|L}W;[VS]QQ[RN]{I|L}{I|L}W;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[RN]{I|L}[HT]SV;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}[RN][HT]SV;[VS]QQ{I|L}A[QA]{I|L}SV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QV[QP]{I|L}SV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PR[QA]{I|L}W;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[AG][NP]{I|L}{I|L}SV 3.9145;3.866;3.7642;3.7642;3.1968;3.1968;3.1313;3.0756;3.0743;3.0639 +;-;-;-;-;-;-;-;-;- + 739 1 1.475 53109.3 1.0 12875 5052 17926 HBL1_DMSO_200M_050219_2,17929 HBL1_DMSO_200M_050219_2,17929,YPLQGPGLLSV False True YPLQGPGLLSV 95.669291 572.324084460735 143640348.0 17926.0 nc|ENSG00000113569|O75694-2|NUP155;;ENSG00000113569|ENST00000231498|NUP155 3.9148178895314536 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17930 95.671 63.0 981640.0 25 0 120920.0 + 30789 RIFGESIMIGV 11 60 611.3369542423935 1220.659355551587 2 611.3376342654228 MULTI CID FTMS 0 0 0 17926 716824.3125 0.7711609906683594 1 -0.0714950561523437 4 Unmodified _RIFGESIMIGV_ ENSG00000163002|ENST00000295119|NUP35;nc|ENSG00000163002|Q8NFH5-2|NUP35;nc|ENSG00000163002|Q8NFH5-3|NUP35 37.07464296494664 0.257459615863268 4 S{I|L}M{I|L}GV 6 5 61.063 0.0 0.0 5.0024 0.0 0.0 602.3188954084 0.0 602.3188954084 0.0 41.56468113655532 0.0 0.0 0 1.424742501084005 0.0 0.805462187404089 0.0 + S{I|L}M{I|L}GV 5.0024 + + 147 1 1.475 52270.3 1.0 12876 5052 17926 HBL1_DMSO_200M_050219_2,17930 HBL1_DMSO_200M_050219_2,17930,RIFGESIMIGV False True RIFGESIMIGV 95.670843 611.337634265423 16039712.0 17926.0 ENSG00000163002|ENST00000295119|NUP35;;nc|ENSG00000163002|Q8NFH5-2|NUP35;;nc|ENSG00000163002|Q8NFH5-3|NUP35 6.94435453414917 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17931 95.673 77.0 1006600.0 25 0 170520.0 + 1519 ALIEKLVEL 9 95 514.3232928880705 1026.6320328429408 2 514.3239623904228 MULTI CID FTMS 0 0 0 17926 559645.375 0.227297432916953 -2 0.2118377685546875 5 Unmodified _ALIEKLVEL_ ENSG00000014138|ENST00000265465|POLA2;ENST00000532469.1_1_11:65029724-65047127:+|nuORF 51.629811660486645 0.0367964933207742 4 [{I|L}A]{I|L}{M(Oxidation (M))|F}V{I|L}{I|L}EG 9 4 77.22 0.0 0.0 7.5217 0.0 0.0 0.0 68.05137048892811 68.05137048892811 34.50441289091096 0.0 0.0 0.0 0 0.7302046884880937 2.0 1.680884548956689 0.0 [{I|L}A]{I|L}{M(Oxidation (M))|F}V{I|L}{I|L}EG 7.5217 - 1614 + 1 1.475 63250.6 1.0 12877 5052 17926 HBL1_DMSO_200M_050219_2,17931 HBL1_DMSO_200M_050219_2,17931,ALIEKLVEL True True ALIEKLVEL 95.672622 514.323962390423 37934015.875 17926.0 ENSG00000014138|ENST00000265465|POLA2;;ENST00000532469.1_1_11:65029724-65047127:+|nuORF 4.533582846323649 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17932 95.674 74.0 1110600.0 25 0 156730.0 + 10626 FVNDIFERI 9 72 576.8058378406351 1151.5971227480702 2 576.8062621951103 MULTI CID FTMS 0 0 0 17926 525012.0625 0.024160820227655 -5 0.4730148315429687 6 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 59.36838082759317 0.0264317782606298 4 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L} 9 0 + 86.865 0.0 0.0 7.543 7.543 88.963 0.0 0.0 0.0 52.422750325201406 12.587418566968154 12.587418566968154 8.010299956639813 0 1.274227503252014 0.0 0.0 1.1549471895720984 + + {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VN{I|L}D{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}V{I|L}ND{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGG{I|L}D{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}V{I|L}GGD{M(Oxidation (M))|F}ER{I|L};{[QN]|[E{I|L}]|[KN]}[HA]{I|L}{I|L}DNVE;[DN]V{[HG]|PP}R{I|L}NVE;{[QN]|[E{I|L}]|[KN]}[HA]{I|L}D{I|L}NVE;{[QN]|[E{I|L}]|[KN]}[HA]{I|L}{I|L}DGGVE 7.543;6.8474;6.7434;6.2825;6.0478;5.4829;4.9951;4.4917;4.2995;4.1993 +;-;-;-;-;-;-;-;-;- + 451 + 1 1.475 66141.2 1.0 12878 5052 17926 HBL1_DMSO_200M_050219_2,17932 HBL1_DMSO_200M_050219_2,17932,FVNDIFERI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17933 95.677 103.0 558310.0 25 0 84577.0 + 12465 GVAESIHLWEV 11 82 620.322107654917 1238.629662376634 2 620.3224975466728 MULTI CID FTMS 0 0 0 17926 394573.75 0.199119320325122 -3 0.33642578125 7 Unmodified _GVAESIHLWEV_ ENSG00000065268|ENST00000585809|WDR18 75.76082778847304 0.0157096510099958 4 [VG]A[Y{M(Oxidation (M))|F}]{I|L}DEAVR 11 7 + 65.738 0.0 0.0 5.3073 5.3073 53.797 0.0 0.0 0.0 8.918282815809178 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 [VG]A[Y{M(Oxidation (M))|F}]{I|L}DEAVR;[VG]A[Y{M(Oxidation (M))|F}]{I|L}DEARV;[VG]A[Y{M(Oxidation (M))|F}]{I|L}DAREV;[VG]A[Y{M(Oxidation (M))|F}]{I|L}DAEVR;[VG]A[Y{M(Oxidation (M))|F}]{I|L}WEVGV;[VG]A[Y{M(Oxidation (M))|F}]{I|L}DAERV;RA[{M(Oxidation (M))|F}V]D{I|L}[YQ]EV;[VG]A[Y{M(Oxidation (M))|F}]{I|L}[VG]WEV;[VG]A[Y{M(Oxidation (M))|F}]{I|L}R{[DA]|[EG]}EV;[H{I|L}]S{I|L}EADEAVR 5.3073;5.3073;5.1687;5.1651;5.1651;5.1651;4.5873;4.5261;4.5261;4.4736 -;-;-;-;-;-;-;-;-;- 3725 1 1.475 50165.3 1.0 12879 5052 17926 HBL1_DMSO_200M_050219_2,17933 HBL1_DMSO_200M_050219_2,17933,GVAESIHLWEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17934 95.68 165.0 511650.0 25 0 66899.0 + 3035 AVLDNFVYV 9 107 520.2760486321398 1038.5375443310795 2 520.2766601443291 MULTI CID FTMS 0 0 0 17926 285041.25 0.5943508868230365 -2 0.2118377685546875 8 Unmodified _AVLDNFVYV_ ENSG00000167487|ENST00000300976|KLHL26 21.74664581756881 0.2544899275067181 4 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}ND{I|L} 6 6 29.548 0.0 0.0 2.8452 0.0 0.0 0.0 376.18607347144376 376.18607347144376 10.68012355221921 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.9247425010840048 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}ND{I|L} 2.8452 - 1400 1 1.475 67011.7 1.0 12880 5052 17926 HBL1_DMSO_200M_050219_2,17934 HBL1_DMSO_200M_050219_2,17934,AVLDNFVYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17935 95.683 186.0 348050.0 25 0 57836.0 + 8152 EPMQKFMLI 9 99 568.7953277483442 1135.5761025634883 2 568.7962524294853 MULTI CID FTMS 0 0 0 17926 273569.09375 0.9777265980904524 -1 0.1099166870117187 9 Unmodified _EPMQKFMLI_ ENSG00000011566|ENST00000263881|MAP4K3;ENSG00000012983|ENST00000682126|MAP4K5;ENST00000554990.5_1_14:50886739-50915587:-|nuORF;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;nc|ENSG00000011566|Q8IVH8-3|MAP4K3 24.67388899826682 0.2172451872415813 4 {I|L}M{M(Oxidation (M))|F}KQM 6 6 36.459 0.0 0.0 3.2106 0.0 0.0 149.1088306902446 205.0622500055297 354.1710806957743 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {I|L}M{M(Oxidation (M))|F}KQM 3.2106 - 548 + 1 1.475 52299.3 1.0 12881 5052 17926 HBL1_DMSO_200M_050219_2,17935 HBL1_DMSO_200M_050219_2,17935,EPMQKFMLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17936 95.686 104.0 599510.0 25 0 98356.0 + 4923 DGLLRVLTV 9 83 493.30532047801137 984.5960880228228 2 493.3025085330009 MULTI CID FTMS 0 0 0 17926 242319.875 0.0609208475448844 3 -0.2013626098632812 10 Unmodified _DGLLRVLTV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 53.40400417844725 0.0329064971918313 4 {NN|[MP]|[D{I|L}]|[EV]}G{I|L}RV{I|L}TV 9 2 + 53.042 0.0 0.0 5.3872 5.3872 81.861 0.0 0.0 0.0 9.056674098797544 14.973024840566469 9.056674098797544 8.979400086720375 0 1.3182503180159344 1.5228787452803376 0.5 0.0 {NN|[MP]|[D{I|L}]|[EV]}G{I|L}RV{I|L}TV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}GRV{I|L}TV;[DG]{I|L}{I|L}RV{I|L}TV;{NN|[MP]|[D{I|L}]|[EV]}VK{I|L}{I|L}GEV;{NN|[MP]|[D{I|L}]|[EV]}VK{I|L}{I|L}ADV;[{I|L}T]A{[VA]|[{I|L}G]}{I|L}{I|L}ADV;[{I|L}T]A{[VA]|[{I|L}G]}{I|L}{I|L}GEV;{NN|[MP]|[D{I|L}]|[EV]}VK{I|L}[TP]TV;{NN|[MP]|[D{I|L}]|[EV]}VK{I|L}{I|L}WV;[{I|L}T]A{[VA]|[{I|L}G]}{I|L}[TP]TV 5.3872;4.4752;4.4674;4.3721;4.3721;4.2952;4.2952;4.2504;4.1987;4.1735 -;-;+;-;-;-;-;-;-;- + 621 1 1.475 52288.2 1.0 12882 5052 17926 HBL1_DMSO_200M_050219_2,17936 HBL1_DMSO_200M_050219_2,17936,DGLLRVLTV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17937 95.691 280.0 232580.0 25 0 30688.0 + 18296 KVLDFEHFL 9 92 383.2094390089342 1146.6064876270027 3 383.2094299197197 MULTI CID FTMS 0 0 0 17926 214413.171875 0.2602175812963112 2 -0.1597442626953125 11 Unmodified _KVLDFEHFL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 26.020703789607367 0.2001090068861241 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L} 9 0 + 31.239 0.0 0.0 2.7245 2.7245 71.836 0.0 0.0 0.0 6.352484377785604 11.044973785707851 6.352484377785604 7.227403931115678 0 1.0673851849885576 0.0 0.4247425010840047 0.2215141619232908 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}E{I|L}[WR]{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}[WR]{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D[TP]{[QS]|[NT]}{M(Oxidation (M))|F}{I|L} 2.7245;2.0942;1.7271;0.94137 +;-;-;- + 104 1 1.475 56342.3 1.0 12883 5052 17926 HBL1_DMSO_200M_050219_2,17937 HBL1_DMSO_200M_050219_2,17937,KVLDFEHFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17938 95.696 257.0 203320.0 25 0 30746.0 + 11729 GLIEIISNA 9 99 465.2692582958616 928.5239636585231 2 465.2689697146416 MULTI CID FTMS 0 0 0 17926 191468.390625 0.6342787904310785 2 -0.1597442626953125 12 Unmodified _GLIEIISNA_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000480835.1_1_2:96943505-96944085:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 42.09456458481378 0.0639583784996157 4 {[QN]|[E{I|L}]|[KN]}{I|L}G{I|L} 5 6 35.929 0.0 0.0 3.8694 0.0 0.0 0.0 400.1839210011222 400.1839210011222 13.63952668130867 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3252574989159953 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}G{I|L} 3.8694 - 252 1 1.475 45151.0 1.0 12884 5052 17926 HBL1_DMSO_200M_050219_2,17938 HBL1_DMSO_200M_050219_2,17938,GLIEIISNA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17939 95.709 800.0 168640.0 25 0 10191.0 + -1 LIGCCFYFLI 10 134 624.8092058557472 1247.6038587782944 2 624.8101074099541 MULTI CID FTMS 0 0 0 17926 139926.59375 0.6485881678621387 3 -0.2013626098632812 13 Carbamidomethyl (C) _LIGC(Carbamidomethyl (C))CFYFLI_ REV__ENST00000606080.1_1_6:116381649-116381904:-|nuORF 24.67388899826682 0.4143206957119831 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}[C(Carbamidomethyl (C))N]P{M(Oxidation (M))|F}{I|L}{I|L} 10 -1 + 55.745 0.0 0.0 4.4682 4.4682 75.96 0.0 0.0 0.0 6.399921443766814 15.026975159433531 6.399921443766814 6.399921443766814 0 0.7742275032520141 1.5228787452803376 1.1382104921644451 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}[C(Carbamidomethyl (C))N]P{M(Oxidation (M))|F}{I|L}{I|L};{I|L}{I|L}{[DA]|[EG]}E[DC]P{M(Oxidation (M))|F}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}[C(Carbamidomethyl (C))N]M{I|L}{I|L}{I|L};[EP]V{I|L}C[DC]M{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[AG]{I|L}[C(Carbamidomethyl (C))N]P{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}A][WD][C(Carbamidomethyl (C))N]P{M(Oxidation (M))|F}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}EK{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}[C(Carbamidomethyl (C))N]{I|L}M{I|L}{I|L};[EP]V{I|L}C[DC]{I|L}M{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}[C(Carbamidomethyl (C))N]P{M(Oxidation (M))|F}{I|L}{I|L} 4.4682;3.9552;3.8865;3.7701;3.7336;3.7301;3.7234;3.6452;3.5288;3.3887 -;-;-;-;-;-;-;-;-;- 3607 1 1.475 111892.5 0.6100000143051147 12885 5052 17926 HBL1_DMSO_200M_050219_2,17939 HBL1_DMSO_200M_050219_2,17939,LIGCCFYFLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17940 95.723 800.0 149950.0 25 0 12162.0 + 31154 RLPDMEMVINV 11 98 658.8384713940297 1315.6623898548594 2 658.8386108279228 MULTI CID FTMS 0 0 0 17926 134369.890625 1.0 0 0.0 14 Unmodified _RLPDMEMVINV_ ENSG00000163389|ENST00000295588|POGLUT1 42.83518252547288 0.1687213420692654 4 D{I|L}VMEMH{I|L}NV 10 4 70.642 0.0 0.0 5.3693 0.0 0.0 116.08940618139316 0.0 116.08940618139316 0.0 48.42391006080028 0.0 0.0 0 0.4247425010840047 0.0 0.0 1.1549471895720984 D{I|L}VMEMH{I|L}NV 5.3693 - 375 + 1 1.475 92137.4 0.6000000238418579 12886 5052 17926 HBL1_DMSO_200M_050219_2,17940 HBL1_DMSO_200M_050219_2,17940,RLPDMEMVINV False True RLPDMEMVINV 95.723214 658.838610827923 1240283.5 17926.0 ENSG00000163389|ENST00000295588|POGLUT1 8.495750427246094 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17941 95.734 595.0 176590.0 25 0 18437.0 + 2641 ATADDIRALLI 11 116 586.3380885187242 1170.6616241042484 2 586.3381835818291 MULTI CID FTMS 0 0 0 17926 122755.359375 0.7549130384105777 -1 0.1099166870117187 15 Unmodified _ATADDIRALLI_ ENSG00000173273|ENST00000310430|TNKS 55.24861242081279 0.0885632729458983 4 [TA]AQ[QA]A{I|L}TA{I|L}{I|L} 12 6 + 63.043 0.0 0.0 5.3852 5.3852 70.89 0.0 0.0 0.0 6.286432309092227 6.286432309092227 6.286432309092227 0.7918124604762511 0 1.6237125054200234 2.0 0.3494850021680094 0.0 [TA]AQ[QA]A{I|L}TA{I|L}{I|L};[TA]AQ[QA]ATA{I|L}{I|L}{I|L};[TA]AQ[RN]{I|L}TA{I|L}{I|L};[TA]AQ[RN]TA{I|L}{I|L}{I|L};[TA]AQ[QA]AT{I|L}A{I|L}{I|L};[TA]AD[{M(Oxidation (M))|F}V][KP]P{I|L}{I|L};[TA]AQ[RN]T{I|L}A{I|L}{I|L};[TA]AQ[QA]A{I|L}{I|L}TA{I|L};[TA]W[{M(Oxidation (M))|F}V][KP]P{I|L}{I|L};[TA]AQ[RN]{I|L}{I|L}TA{I|L} 5.3852;5.3176;5.228;5.1604;4.9777;4.8482;4.8204;4.701;4.6941;4.5438 -;-;-;-;-;-;-;-;-;- 1119 1 1.475 84528.0 1.0 12887 5052 17926 HBL1_DMSO_200M_050219_2,17941 HBL1_DMSO_200M_050219_2,17941,ATADDIRALLI True True ATADDIRALLI 95.733641 586.338183581829 1213590.75 17926.0 ENSG00000173273|ENST00000310430|TNKS 4.576702992121379 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17943 95.739 73.0 641430.0 25 0 85614.0 + 5594 DNADLILIEL 10 79 564.8111280630062 1127.6077031928123 2 564.8113891482353 MULTI CID FTMS 0 0 0 17942 563694.0625 0.1584521344496123 3 -0.1999130249023437 1 Unmodified _DNADLILIEL_ REV__ENSG00000075275|ENST00000674500|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6-2|CELSR1;REV__nc|ENSG00000075275|Q9NYQ6|CELSR1 32.89776655970281 0.2325650513667944 4 {[QN]|[E{I|L}]|[KN]}[NG]D{I|L}{I|L}E{I|L}{I|L} 10 -1 + 60.669 0.0 0.0 5.3804 5.3804 87.148 0.0 0.0 0.0 16.64095374016169 33.75808279377678 16.64095374016169 23.758756657153363 0 0.3182503180159344 1.0457574905606752 0.7134679910804405 1.1989700043360187 {[QN]|[E{I|L}]|[KN]}[NG]D{I|L}{I|L}E{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}D{I|L}{I|L}E{I|L}{I|L} 5.3804;3.2734 -;- 126 1 1.483 41153.9 1.0 12888 5053 17942 HBL1_DMSO_200M_050219_2,17943 HBL1_DMSO_200M_050219_2,17943,DNADLILIEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17944 95.741 51.0 1120100.0 25 0 114610.0 + 2904 AVFPDDMPTL 10 77 553.2651345710362 1104.5157162088724 2 553.2657348513603 MULTI CID FTMS 0 0 0 17942 1002022.25 0.9063519319418984 2 -0.1298675537109375 2 Unmodified _AVFPDDMPTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 48.345845343767074 0.089859443182303 4 [TP][EC][TP]{M(Oxidation (M))|F}PT{I|L} 10 6 [TP][EC][TP]{M(Oxidation (M))|F} + + 25.247 7.5699 0.97636 2.2858 2.2858 44.838 0.0 0.0 0.0 0.0 -0.5717204353666538 -0.5717204353666538 0.0 0 0.3494850021680094 0.0 0.7059771852360797 0.0 [TP][EC][TP]{M(Oxidation (M))|F}PT{I|L} 2.2858 - 164 + 1 1.483 52684.2 1.0 12889 5053 17942 HBL1_DMSO_200M_050219_2,17944 HBL1_DMSO_200M_050219_2,17944,AVFPDDMPTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17945 95.742 30.0 1492900.0 25 0 97982.0 -1 LMFQIRYI 8 70 550.300497040935 1098.58644114867 2 550.3036376833916 MULTI CID FTMS 0 0 0 17942 1066241.875 0.0476199607872035 -7 0.6131134033203125 3 Oxidation (M) _LM(Oxidation (M))FQIRYI_ nc|ENSG00000163349|Q86Z02-4|HIPK1 24.67388899826682 0.525179942228231 4 YP{M(Oxidation (M))|F} 3 -1 46.242 0.0 0.0 4.2092 0.0 0.0 0.0 688.380249392467 688.380249392467 8.283409326844264 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 YP{M(Oxidation (M))|F} 4.2092 - 161 + 1 1.483 44039.5 1.0 12890 5053 17942 HBL1_DMSO_200M_050219_2,17945 HBL1_DMSO_200M_050219_2,17945,LMFQIRYI False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 17946 95.744 120.0 789970.0 25 0 59870.0 -1 0 86 771.36593400313 3081.43463014612 4 771.6178466677666 MULTI CID FTMS 0 0 0 17942 858887.9375 0.8832406486649912 1 -0.0882492065429687 4 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 74.307 0.0 0.0 2.4114 0.0 0.0 0.0 2040.8219341834824 2040.8219341834824 55.789719040763046 0.0 0.0 0.0 0 1.3494850021680094 1.3979400086720375 1.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.4114 - 556 1 1.483 74258.0 1.0 12891 5053 17942 HBL1_DMSO_200M_050219_2,17946 HBL1_DMSO_200M_050219_2,17946, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17947 95.746 47.0 1401200.0 25 0 147270.0 + 22991 LSGVLALVEL 10 74 507.31582783554376 1012.6171027378876 2 507.3153259158134 MULTI CID FTMS 0 0 0 17942 843398.9375 0.1383737726572162 -4 0.4079208374023437 5 Unmodified _LSGVLALVEL_ REV__ENSG00000169418|ENST00000368680|NPR1 41.8396318013385 0.1381409678234242 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}AK{I|L}VE{I|L} 9 -1 + 75.882 0.0 0.0 7.4936 7.4936 61.785 0.0 0.0 0.0 4.381288765556363 16.478174818886373 4.381288765556363 0.0 0 0.75 1.154901959985743 0.6989700043360187 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}AK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}KA{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}VKA{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}VAK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}AKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KAVE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}GK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}A{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}AVE{I|L};{[QN]|[E{I|L}]|[KN]}V{I|L}KAVE{I|L} 7.4936;7.4936;7.061;7.061;6.9746;6.9746;6.7637;6.6773;6.6773;6.5419 -;-;-;-;-;-;-;-;-;- 1669 1 1.483 53969.0 1.0 12892 5053 17942 HBL1_DMSO_200M_050219_2,17947 HBL1_DMSO_200M_050219_2,17947,LSGVLALVEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17948 95.748 88.0 901680.0 25 0 97905.0 + + 9329 RQLSEVFIQL 10 61 616.8536117008973 1231.6926704685943 2 616.8539916872978 MULTI CID FTMS 0 0 0 17942 672198.5625 1.0 0 0.0 6 Unmodified _FIIWGDKIQL_ ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 20.41453444215458 0.5050059513928961 4 [Q{I|L}]T[RD]V{M(Oxidation (M))|F}{I|L}Q{I|L} 10 -1 + 37.659 0.0 0.0 3.0575 3.0575 77.121 0.0 0.0 0.0 8.57361725837448 18.61814327499733 8.57361725837448 12.429679994357606 0 0.9876954943324544 0.0 0.0 0.2887254899964357 [Q{I|L}]T[RD]V{M(Oxidation (M))|F}{I|L}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}V[RD]V{M(Oxidation (M))|F}{I|L}Q{I|L} 3.0575;2.0483 -;- 94 1 1.483 65915.0 1.0 12893 5053 17942 HBL1_DMSO_200M_050219_2,17948 HBL1_DMSO_200M_050219_2,17948,FIIWGDKIQL False False RQLSEVFIQL 95.747503 616.853991687298 5419607.5 17942.0 ENST00000591595.5_1_19:11130023-11172489:+|nuORF;;ENSG00000080503|ENST00000349721|SMARCA2;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;nc|ENSG00000080503|P51531-2|SMARCA2;;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;;ENSG00000127616|ENST00000344626|SMARCA4;;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 4.227398077646892 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17949 95.749 72.0 570740.0 25 0 76031.0 + 29784 QPYPEILVV 9 73 529.2998306384247 1056.5851083436494 2 529.2996703982353 MULTI CID FTMS 0 0 0 17942 643630.25 0.6256482967869534 2 -0.1298675537109375 7 Unmodified _QPYPEILVV_ ENSG00000104312|ENST00000220751|RIPK2;ENST00000522965.1_1_8:90770176-90802641:+|nuORF;nc|ENSG00000104312|O43353-2|RIPK2 37.97399986684836 0.0865783450051559 4 [EP]{I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}VV 9 5 + 47.101 0.0 0.0 4.4578 4.4578 50.383 0.0 0.0 0.0 3.0102999566398125 8.824995917031941 3.0102999566398125 0.0 0 0.8182503180159344 0.0 0.9247425010840048 0.3807196863200844 [EP]{I|L}{I|L}{M(Oxidation (M))|F}Q{I|L}VV;[EP]{I|L}YPQ{I|L}VV;{[QN]|[E{I|L}]|[KN]}P{I|L}{M(Oxidation (M))|F}Q{I|L}VV;{[QN]|[E{I|L}]|[KN]}PYPQ{I|L}VV;[EP]Y{I|L}PQ{I|L}VV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}PQ{I|L}VV;[EP]Y[QP]{I|L}{I|L}VV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[QP]{I|L}{I|L}VV;{[QN]|[E{I|L}]|[KN]}PYP[AG]{I|L}VV;{[QN]|[E{I|L}]|[KN]}P{I|L}{M(Oxidation (M))|F}[AG]{I|L}VV 4.4578;4.4578;4.1729;4.1729;4.1729;3.888;3.8179;3.533;3.3014;3.3014 -;-;-;-;-;-;-;-;-;- 246 1 1.483 45305.2 1.0 12894 5053 17942 HBL1_DMSO_200M_050219_2,17949 HBL1_DMSO_200M_050219_2,17949,QPYPEILVV True True QPYPEILVV 95.749203 529.299670398235 11647230.0 17942.0 ENSG00000104312|ENST00000220751|RIPK2;;nc|ENSG00000104312|O43353-2|RIPK2;;ENST00000522965.1_1_8:90770176-90802641:+|nuORF 6.719611485799153 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17950 95.751 101.0 745750.0 25 0 142650.0 + 4043 DALSLKELI 9 92 501.2979055513276 1000.5812581694552 2 501.2977172732353 MULTI CID FTMS 0 0 0 17942 564645.875 0.7512807849288368 -1 0.0714950561523437 8 Unmodified _DALSLKELI_ ENSG00000146909|ENST00000275820|NOM1;ENST00000475176.1_1_7:156752694-156752904:+|nuORF 74.19965305603844 0.0194755241623067 4 {[DA]|[EG]}{I|L}S{I|L}KE{I|L}{I|L} 9 0 + 77.29 0.0 0.0 7.7245 7.7245 80.178 0.0 0.0 0.0 1.363781092484686 16.478174818886373 1.363781092484686 1.363781092484686 0 2.322682509756042 2.0 0.7742275032520141 0.0 + + {[DA]|[EG]}{I|L}S{I|L}KE{I|L}{I|L};{[TV]|[{I|L}S]}AVS{I|L}GE{I|L}{I|L};{[SA]|[TG]}{I|L}VS{I|L}GE{I|L}{I|L};[K{I|L}]ES{I|L}GE{I|L}{I|L};{[TV]|[{I|L}S]}AV{I|L}SGE{I|L}{I|L};{[TV]|[{I|L}S]}KE{I|L}GE{I|L}{I|L};{[SA]|[TG]}{I|L}V{I|L}SGE{I|L}{I|L};[K{I|L}]SE{I|L}GE{I|L}{I|L};{[TV]|[{I|L}S]}AVS{I|L}{I|L}{[DA]|[EG]}{I|L};[{I|L}T]GVS{I|L}GE{I|L}{I|L} 7.7245;7.5882;7.3749;6.81;6.6615;6.6518;6.4481;6.2083;6.0943;5.9694 +;-;-;-;-;-;-;-;-;- + 851 1 1.483 63821.9 1.0 12895 5053 17942 HBL1_DMSO_200M_050219_2,17950 HBL1_DMSO_200M_050219_2,17950,DALSLKELI True True DALSLKELI 95.751376 501.297717273235 10830763.0 17942.0 ENSG00000146909|ENST00000275820|NOM1;;ENST00000475176.1_1_7:156752694-156752904:+|nuORF 4.169342199961345 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17951 95.755 159.0 401940.0 25 0 73110.0 + 13699 HQIPEFDNLYL 11 54 694.8454106096534 1387.6762682861067 2 694.8466064333916 MULTI CID FTMS 0 0 0 17942 373084.53125 0.4859968865144194 2 -0.1298675537109375 9 Unmodified _HQIPEFDNLYL_ ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2-3|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1 30.7034409873982 0.3712764582118616 4 [HQ]{I|L}[EP]{M(Oxidation (M))|F}DN{I|L}Y{I|L} 11 0 + 46.528 0.0 0.0 3.353 3.353 71.648 0.0 0.0 0.0 3.533413629619808 25.23001272063737 3.533413629619808 5.779550148593486 0 0.6435078169319297 0.0 0.0 0.6861818737241735 + + [HQ]{I|L}[EP]{M(Oxidation (M))|F}DN{I|L}Y{I|L};[DN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}HQ{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}ND{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR];[HQ]{I|L}[EP]{M(Oxidation (M))|F}DGG{I|L}Y{I|L};[DN]{M(Oxidation (M))|F}[EP]{I|L}HQ{I|L}Y{I|L};[HQ]{I|L}[SG][QT]DN{I|L}Y{I|L};[DN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GG{I|L}HQ{I|L}Y{I|L};[DN]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}N{I|L}H[AG]{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}GGD{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[WR];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}ND[QT]{NN|[MP]|[D{I|L}]|[EV]}Y{I|L} 3.353;2.9365;2.7757;2.6951;2.5926;2.4782;2.2786;2.2786;2.1152;1.9485 +;-;-;-;-;-;-;-;-;- + 233 1 1.483 57198.2 1.0 12896 5053 17942 HBL1_DMSO_200M_050219_2,17951 HBL1_DMSO_200M_050219_2,17951,HQIPEFDNLYL False True HQIPEFDNLYL 95.754516 694.846606433392 14607105.0 17942.0 nc|ENSG00000114127|Q8IZH2-3|XRN1;;nc|ENSG00000114127|Q8IZH2|XRN1;;ENSG00000114127|ENST00000392981|XRN1 8.036898295084635 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17952 95.757 93.0 478170.0 25 0 37672.0 + 20605 LLPHDGAPGWV 11 88 581.304892109068 1160.5952312849358 2 581.3000366091728 MULTI CID FTMS 0 0 0 17942 288531.25 0.3394047811337259 2 -0.1298675537109375 10 Unmodified _LLPHDGAPGWV_ REV__ENST00000543196.6_1_12:51753021-51754538:-|nuORF 13.90604991867851 0.7458848613461305 4 [WP]{I|L}Q{I|L}Y[WR] 8 -1 + 40.934 0.0 0.0 3.527 3.527 71.038 0.0 0.0 0.0 7.403626894942441 5.484550065040281 5.484550065040281 4.771212547196626 0 0.0 1.154901959985743 0.0 0.0 [WP]{I|L}Q{I|L}Y[WR];[WP]{I|L}{I|L}QY[WR];[WP]{I|L}QY{I|L}[WR];[{I|L}P]WQ{I|L}Y[WR];[WP]{I|L}[AG]{I|L}Y[WR];YYVV{I|L}Y[WR];{I|L}{I|L}[WP]QY[WR];[{I|L}P]W{I|L}QY[WR];[WP]{I|L}{I|L}[AG]Y[WR];[{I|L}P]WQY{I|L}[WR] 3.527;3.1159;2.9248;2.8891;2.729;2.6396;2.4879;2.478;2.3179;2.2869 -;-;-;-;-;-;-;-;-;- 342 1 1.483 42774.7 1.0 12897 5053 17942 HBL1_DMSO_200M_050219_2,17952 HBL1_DMSO_200M_050219_2,17952,LLPHDGAPGWV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17953 95.763 344.0 396190.0 25 0 18642.0 -1 0 92 791.3727088192045 2371.096297057813 3 792.0419799685478 MULTI CID FTMS 0 0 0 17942 228897.84375 0.6892215528294313 -9 0.789154052734375 11 4 M[HC]{M(Oxidation (M))|F}PPPPP{[QN]|[E{I|L}]|[KN]} 11 -1 41.806 0.0 0.0 1.7632 0.0 0.0 1107.570228646599 0.0 1107.570228646599 0.0 8.441451107270446 0.0 0.0 0 0.4247425010840047 0.0 0.5114393726401688 1.6025684359364405 M[HC]{M(Oxidation (M))|F}PPPPP{[QN]|[E{I|L}]|[KN]} 1.7632 - 11939 + 1 1.483 101892.8 1.0 12898 5053 17942 HBL1_DMSO_200M_050219_2,17953 HBL1_DMSO_200M_050219_2,17953, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17954 95.771 454.0 272480.0 25 0 22737.0 + 25373 NAYFLLPKV 9 140 532.810682484293 1063.606812035386 2 532.8109619021416 MULTI CID FTMS 0 0 0 17942 174393.28125 0.5593399478204567 2 -0.1298675537109375 12 Unmodified _NAYFLLPKV_ ENSG00000121210|ENST00000409959|TMEM131L;ENST00000462540.1_1_4:154475378-154479541:+|nuORF;nc|ENSG00000121210|A2VDJ0-3|TMEM131L;nc|ENSG00000121210|A2VDJ0-6|TMEM131L;nc|ENSG00000121210|A2VDJ0|TMEM131L 43.85829265575387 0.0542763391141878 4 {[QG]|[NA]}Y{M(Oxidation (M))|F}{I|L}{I|L}PKV 9 0 + 71.001 0.0 0.0 6.6755 6.6755 90.37 0.0 0.0 0.0 58.237242186371766 11.082268588648247 11.082268588648247 12.548606762386662 0 0.805462187404089 2.0 0.0 0.2134679910804404 + + {[QG]|[NA]}Y{M(Oxidation (M))|F}{I|L}{I|L}PKV;{[QG]|[NA]}Y{M(Oxidation (M))|F}{I|L}{I|L}KPV;{[QG]|[NA]}Y{M(Oxidation (M))|F}{I|L}{I|L}V[KP];[{I|L}T]K{I|L}{I|L}C{I|L}N{M(Oxidation (M))|F};[KA]KK{I|L}C{I|L}N{M(Oxidation (M))|F} 6.6755;5.4957;5.2453;2.8144;1.0996 +;-;-;-;- + 514 + 1 1.483 99079.8 1.0 12899 5053 17942 HBL1_DMSO_200M_050219_2,17954 HBL1_DMSO_200M_050219_2,17954,NAYFLLPKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17955 95.778 401.0 278600.0 25 0 37364.0 + 17874 KQLHFLVVL 9 96 366.2344359937021 1095.6814785813062 3 366.2345458865166 MULTI CID FTMS 0 0 0 17942 140664.421875 0.5045117045295593 -3 0.2833328247070312 13 Unmodified _KQLHFLVVL_ ENST00000404488.7_1_22:50319154-50321136:+|nuORF 20.41453444215458 0.284085796332423 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[YK]KVV{I|L} 9 5 + 31.365 0.0 0.0 2.8626 2.8626 77.494 0.0 0.0 0.0 2.46925385715571 15.880544490118428 2.46925385715571 14.948500216800936 0 0.6677353201839438 2.0 0.0 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[YK]KVV{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}QKVV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[H{I|L}]QKVV{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[{I|L}V]AAKVV{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}[AG]KVV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HV]AAKVV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[H{I|L}][AG]KVV{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[{I|L}V][KQ]{I|L}V{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[{I|L}V]{I|L}[KQ]V{I|L} 2.8626;1.4983;1.2236;0.86037;0.65789;0.58563;0.38315;0.13854;0.13854 -;-;-;-;-;-;-;-;- 202 1 1.483 97997.3 1.0 12900 5053 17942 HBL1_DMSO_200M_050219_2,17955 HBL1_DMSO_200M_050219_2,17955,KQLHFLVVL False True KQLHFLVVL 95.778051 366.234545886517 2076414.25 17942.0 ENST00000404488.7_1_22:50319154-50321136:+|nuORF 5.167456706364949 3.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17956 95.792 800.0 124850.0 25 0 6677.7 -1 0 119 739.1057409421632 2952.3938579022524 4 739.3596069216728 MULTI CID FTMS 0 0 0 17942 123944.015625 0.4707114989272472 3 -0.1999130249023437 14 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 62.406 0.0 0.0 2.1137 0.0 0.0 0.0 1911.7764011974275 1911.7764011974275 44.35850004969453 0.0 0.0 0.0 0 1.5 1.3979400086720375 0.3494850021680094 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.1137 - 3010 1 1.483 81214.7 0.550000011920929 12901 5053 17942 HBL1_DMSO_200M_050219_2,17956 HBL1_DMSO_200M_050219_2,17956, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17957 95.806 800.0 106480.0 25 0 11433.0 -1 0 69 751.6988142467638 2252.0746133404914 3 752.0338622927666 MULTI CID FTMS 0 0 0 17942 114797.296875 0.1798890817840778 3 -0.1999130249023437 15 4 A[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 8 -1 50.394 0.0 0.0 2.2377 0.0 0.0 1327.691226986139 0.0 1327.691226986139 0.0 32.48896295595124 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 A[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.2377 - 161 1 1.483 73710.9 0.550000011920929 12902 5053 17942 HBL1_DMSO_200M_050219_2,17957 HBL1_DMSO_200M_050219_2,17957, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17958 95.817 652.0 185550.0 25 0 32603.0 + 30193 QVVGLGLVAV 10 115 477.80246934736334 953.5903857615268 2 477.8028137087822 MULTI CID FTMS 0 0 0 17942 110033.40625 0.5791030936261916 -1 0.0714950561523437 16 Unmodified _QVVGLGLVAV_ ENSG00000136908|ENST00000314392|DPM2;ENST00000495270.1_1_9:130699601-130700099:-|nuORF 78.14939416004806 0.0185844602684931 4 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}GG{I|L}VAV 10 2 + 73.409 0.0 0.0 7.6981 7.6981 80.452 0.0 0.0 0.0 1.6203166766920418 10.452490459521968 1.6203166766920418 1.6203166766920418 0 1.1677353201839438 1.3979400086720375 0.0 1.079689690656103 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}GG{I|L}VAV;{[VA]|[{I|L}G]}VG{I|L}N{I|L}VAV;{[VA]|[{I|L}G]}GV{I|L}N{I|L}VAV;{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}N{I|L}VAV;{[VA]|[{I|L}G]}G{I|L}VN{I|L}VAV;{[VA]|[{I|L}G]}VAVN{I|L}VAV;{[QV]|[N{I|L}]|[RA]|[KV]}VG{I|L}G{I|L}VAV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VGG{I|L}VAV;{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}GAVVAV;{[QV]|[N{I|L}]|[RA]|[KV]}VAVG{I|L}VAV 7.6981;7.5282;7.5282;7.5001;7.2125;7.2125;7.2112;7.0949;7.04;6.9652 -;-;-;-;-;-;+;-;-;- + 3095 1 1.483 95809.3 1.0 12903 5053 17942 HBL1_DMSO_200M_050219_2,17958 HBL1_DMSO_200M_050219_2,17958,QVVGLGLVAV True True QVVGLGLVAV 95.817061 477.802813708782 1592914.25 17942.0 ENST00000495270.1_1_9:130699601-130700099:-|nuORF;;ENSG00000136908|ENST00000314392|DPM2 5.332084019978841 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17959 95.822 181.0 553510.0 25 0 54029.0 -1 FYLCPPPL 8 98 503.7557471316981 1005.4969413301964 2 503.7595703005791 MULTI CID FTMS 0 0 0 17942 120193.1484375 0.2411259507288607 -3 0.2833328247070312 17 Carbamidomethyl (C) _FYLC(Carbamidomethyl (C))PPPL_ ENST00000221566.6_1_19:2755712-2755814:-|nuORF 24.20995872069341 0.5349487244130675 4 [HA]{I|L}DAY{M(Oxidation (M))|F}G{I|L} 9 -1 + 36.563 0.0 0.0 3.6364 3.6364 67.291 0.0 0.0 0.0 2.401727763731863 2.401727763731863 2.401727763731863 2.401727763731863 0 0.3252574989159953 0.0 0.0 0.0 [HA]{I|L}DAY{M(Oxidation (M))|F}G{I|L};{M(Oxidation (M))|F}YA{M(Oxidation (M))|F}K{[MS]|[{M(Oxidation (M))|F}A]}{I|L};{M(Oxidation (M))|F}YA[{I|L}P]PEG{I|L};[HA]{I|L}R{M(Oxidation (M))|F}AYE;{M(Oxidation (M))|F}YA{M(Oxidation (M))|F}R[R{M(Oxidation (M))|F}];{[VA]|[{I|L}G]}{M(Oxidation (M))|F}P[{I|L}P]AYE;{I|L}[HM]{M(Oxidation (M))|F}K{[MS]|[{M(Oxidation (M))|F}A]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HA]AY{M(Oxidation (M))|F}G{I|L};[HA]{I|L}[VG]{M(Oxidation (M))|F}AYE;{M(Oxidation (M))|F}YA{M(Oxidation (M))|F}K[MT]V 3.6364;3.3975;3.3878;3.1431;2.9802;2.5359;2.5101;2.2461;2.222;2.082 -;-;-;-;-;-;-;-;-;- 389 1 1.483 78022.1 1.0 12904 5053 17942 HBL1_DMSO_200M_050219_2,17959 HBL1_DMSO_200M_050219_2,17959,FYLCPPPL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17961 95.827 68.0 975220.0 25 0 88071.0 + 1929 AMIELVERL 9 77 537.3047640918295 1072.594975250459 2 537.3052856326103 MULTI CID FTMS 0 0 0 17960 739197.375 0.3990077803959607 2 -0.111663818359375 1 Unmodified _AMIELVERL_ ENSG00000166326|ENST00000299413|TRIM44 43.77239144664712 0.0547478964384323 4 {[DS]|[MA]|[CV]|TT}{I|L}E{I|L}VER{I|L} 9 0 + 81.609 0.0 0.0 7.6086 7.6086 82.047 0.0 0.0 0.0 52.46707224260248 7.580692997033722 7.580692997033722 2.525749891599532 0 1.274227503252014 2.0 0.805462187404089 0.0 + + {[DS]|[MA]|[CV]|TT}{I|L}E{I|L}VER{I|L};{[DS]|[MA]|[CV]|TT}{I|L}E{I|L}{I|L}DR{I|L};{[DS]|[MA]|[CV]|TT}{I|L}{I|L}EVER{I|L};{[DS]|[MA]|[CV]|TT}{I|L}{I|L}E{I|L}DR{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AE{I|L}VER{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AE{I|L}{I|L}DR{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{I|L}EVER{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{I|L}E{I|L}DR{I|L};[{I|L}A]ME{I|L}VER{I|L};[{I|L}A]ME{I|L}{I|L}DR{I|L} 7.6086;7.3731;7.2869;7.0514;6.5494;6.314;6.2277;5.9923;5.0673;4.8318 +;-;-;-;-;-;-;-;-;- + 254 + 1 1.483 56457.5 1.0 12905 5054 17960 HBL1_DMSO_200M_050219_2,17961 HBL1_DMSO_200M_050219_2,17961,AMIELVERL True True AMIELVERL 95.82739 537.30528563261 45588810.0 17960.0 ENSG00000166326|ENST00000299413|TRIM44 4.727294921875 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17962 95.829 34.0 2213900.0 25 0 210290.0 + 27130 PFLWRVGP 8 96 486.2768309585354 970.539108983871 2 486.2768432497978 MULTI CID FTMS 0 0 0 17960 1355911.75 0.9035299099693124 -2 0.1597442626953125 2 Unmodified _PFLWRVGP_ REV__ENST00000567034.5_1_16:30198826-30199264:+|nuORF 15.768221252438446 0.6779680726941459 4 WP{M(Oxidation (M))|F}{I|L}P{[NV]|[RG]}V 8 -1 + 55.346 0.0 0.0 5.7026 5.7026 89.773 0.0 0.0 0.0 28.179184492612137 3.8038781756536366 3.8038781756536366 55.34617220557664 0 0.3494850021680094 1.3979400086720375 0.0 0.7059771852360797 WP{M(Oxidation (M))|F}{I|L}P{[NV]|[RG]}V 5.7026 - 118 + 1 1.483 61028.4 1.0 12906 5054 17960 HBL1_DMSO_200M_050219_2,17962 HBL1_DMSO_200M_050219_2,17962,PFLWRVGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17963 95.831 121.0 1231300.0 25 0 82287.0 -1 0 104 641.3183258915934 2561.244197699973 4 641.5696899294853 MULTI CID FTMS 0 0 0 17960 716975.875 0.8712941599300875 2 -0.111663818359375 3 4 [H{I|L}]VEAY{M(Oxidation (M))|F}C(Carbamidomethyl (C))C(Carbamidomethyl (C))V{I|L}[KC]{I|L}Y 15 -1 80.843 0.0 0.0 3.1564 0.0 0.0 0.0 659.3475040226036 659.3475040226036 63.93130718590854 0.0 0.0 0.0 0 1.5 1.154901959985743 1.524227503252014 0.0 [H{I|L}]VEAY{M(Oxidation (M))|F}C(Carbamidomethyl (C))C(Carbamidomethyl (C))V{I|L}[KC]{I|L}Y 3.1564 - 1956 1 1.483 116813.1 1.0 12907 5054 17960 HBL1_DMSO_200M_050219_2,17963 HBL1_DMSO_200M_050219_2,17963, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17964 95.833 94.0 1005200.0 25 0 154890.0 + 37561 TLIDLPGITRV 11 78 599.3637226945668 1196.7128924559336 2 599.3640014529228 MULTI CID FTMS 0 0 0 17960 693100.9375 0.7136268987864318 2 -0.111663818359375 4 Unmodified _TLIDLPGITRV_ ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1 62.86856922530385 0.057503257068159 4 [{I|L}T]{I|L}VE[KA]{I|L}DE 10 7 78.479 0.0 0.0 6.5579 0.0 0.0 0.0 82.06696497134999 82.06696497134999 60.31865655543953 0.0 0.0 0.0 0 1.2059771852360797 2.0 1.1989700043360187 0.805462187404089 [{I|L}T]{I|L}VE[KA]{I|L}DE 6.5579 - 1493 + 1 1.483 75331.1 1.0 12908 5054 17960 HBL1_DMSO_200M_050219_2,17964 HBL1_DMSO_200M_050219_2,17964,TLIDLPGITRV True True TLIDLPGITRV 95.833174 599.364001452923 17724308.0 17960.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1 5.184823830922444 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17965 95.835 66.0 793860.0 25 0 107700.0 + 11515 GIMDRFLQV 9 73 539.7894454689488 1077.5643380046974 2 539.7898437380791 MULTI CID FTMS 0 0 0 17960 694335.1875 0.6407842102640251 2 -0.111663818359375 5 Unmodified _GIMDRFLQV_ ENSG00000157456|ENST00000288207|CCNB2 47.594388314883695 0.0456443387682827 4 {M(Oxidation (M))|F}{I|L}QV 4 5 35.79 0.0 0.0 3.3214 0.0 0.0 572.27739150215 0.0 572.27739150215 0.0 5.103356682352924 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.0 + {M(Oxidation (M))|F}{I|L}QV 3.3214 + + 116 1 1.483 44916.4 1.0 12909 5054 17960 HBL1_DMSO_200M_050219_2,17965 HBL1_DMSO_200M_050219_2,17965,GIMDRFLQV True True GIMDRFLQV 95.834775 539.789843738079 18558114.0 17960.0 ENSG00000157456|ENST00000288207|CCNB2 8.110364437103271 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17966 95.838 152.0 515060.0 25 0 57826.0 -1 0 101 946.4345463543174 1890.854539775435 2 946.9374267458916 MULTI CID FTMS 0 0 0 17960 293124.40625 0.6021723572283684 3 -0.1726608276367187 6 4 [{I|L}P]T{[SA]|[TG]}{M(Oxidation (M))|F}[{I|L}V]V 9 -1 12.774 0.0 0.0 0.67555 0.0 0.0 0.0 960.296329632666 960.296329632666 -0.0351300964237264 0.0 -0.0351300964237264 0.0 0 0.0 1.0969100130080565 1.4489700043360187 0.0 [{I|L}P]T{[SA]|[TG]}{M(Oxidation (M))|F}[{I|L}V]V 0.67555 - 626 1 1.483 57560.1 1.0 12910 5054 17960 HBL1_DMSO_200M_050219_2,17966 HBL1_DMSO_200M_050219_2,17966, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17967 95.842 208.0 306570.0 25 0 33939.0 + 1723 ALPQFFNNV 9 103 525.2741102803034 1048.5336676274069 2 525.2742187380791 MULTI CID FTMS 0 0 0 17960 197173.65625 0.6860025326251898 -2 0.1597442626953125 7 Unmodified _ALPQFFNNV_ ENSG00000169919|ENST00000304895|GUSB;nc|ENSG00000169919|P08236-2|GUSB;nc|ENSG00000169919|P08236-3|GUSB 18.13498045792455 0.3457906370836843 4 [QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 6 4 40.278 0.0 0.0 3.8414 0.0 0.0 0.0 297.1907505257631 297.1907505257631 23.55651869704872 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.805462187404089 [QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 3.8414 - 421 1 1.483 57159.1 1.0 12911 5054 17960 HBL1_DMSO_200M_050219_2,17967 HBL1_DMSO_200M_050219_2,17967,ALPQFFNNV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17968 95.856 800.0 166940.0 25 0 15577.0 -1 0 89 1186.556913808899 2371.099274684598 2 1187.560595691204 MULTI CID FTMS 0 0 0 17960 162040.375 0.8243100706577561 -12 1.0150527954101562 8 4 [QP][QT]PPPP[C(Carbamidomethyl (C))M]M 11 -1 39.869 0.0 0.0 1.6815 0.0 0.0 0.0 1103.5479158172766 1103.5479158172766 7.212729186702205 0.0 0.0 0.0 0 0.0 0.0 0.6861818737241735 1.579689690656103 [QP][QT]PPPP[C(Carbamidomethyl (C))M]M 1.6815 - 3591 1 1.483 83051.3 0.6499999761581421 12912 5054 17960 HBL1_DMSO_200M_050219_2,17968 HBL1_DMSO_200M_050219_2,17968, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17969 95.864 449.0 251490.0 25 0 37617.0 + 13664 HPWVLPVV 8 107 473.779391089997 945.544229246794 2 473.7792541384697 MULTI CID FTMS 0 0 0 17960 163878.78125 0.8831950173051872 -1 0.0882492065429687 9 Unmodified _HPWVLPVV_ ENSG00000120053|ENST00000370508|GOT1;ENST00000471741.1_1_10:101180368-101190322:-|nuORF;nc|ENSG00000120053|P17174-2|GOT1 41.81723621529253 0.2038889569391319 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WV{I|L}PVV 8 0 + 67.507 0.0 0.0 7.1395 7.1395 77.536 0.0 0.0 0.0 0.7525749891599531 14.024174299985006 0.7525749891599531 0.7525749891599531 0 1.1171302707394362 0.0 1.774227503252014 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WV{I|L}PVV;[VP]WH{I|L}PVV;[VP]W{I|L}HPVV;{[RE]|[WV]}PH{I|L}PVV;{[RE]|[WV]}P{I|L}HPVV;[WP]VH{I|L}PVV;[WP]HV{I|L}PVV;[WP]V{I|L}HPVV;{[QN]|[E{I|L}]|[KN]}[RP]HPVV;[{I|L}V][WP]HPVV 7.1395;7.0599;6.5553;6.2215;5.3473;4.9447;4.4401;4.4401;4.2581;4.0677 +;-;-;-;-;-;-;-;-;- + 236 1 1.483 90984.6 1.0 12913 5054 17960 HBL1_DMSO_200M_050219_2,17969 HBL1_DMSO_200M_050219_2,17969,HPWVLPVV False True HPWVLPVV 95.863642 473.77925413847 2029631.5 17960.0 nc|ENSG00000120053|P17174-2|GOT1;;ENSG00000120053|ENST00000370508|GOT1;;ENST00000471741.1_1_10:101180368-101190322:-|nuORF 6.251243909200032 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17971 95.868 6.3 11752000.0 25 0 1207100.0 + 9966 FPGLAIKI 8 76 429.77601453505866 857.5374761369173 2 429.7763244509697 MULTI CID FTMS 0 0 0 17970 10158163.0 0.8954664191817501 -1 0.0416183471679687 1 Unmodified _FPGLAIKI_ ENSG00000142945|ENST00000372224|KIF2C;ENST00000455186.5_1_1:45205634-45205691:+|nuORF;ENST00000493027.5_1_1:45205556-45221765:+|nuORF 56.541270873467816 0.1144128637334507 4 {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L} 8 0 + 42.781 0.0 0.0 4.9888 4.9888 71.668 0.0 0.0 0.0 24.82188827593649 13.399480616943508 13.399480616943508 2.064608101803792 0 1.145701298008806 0.0 0.0 0.0 + + {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L};{M(Oxidation (M))|F}{I|L}[PG]A{I|L}K{I|L};{M(Oxidation (M))|F}P[Q{I|L}]{I|L}K{I|L};{M(Oxidation (M))|F}{I|L}[QP]{I|L}K{I|L} 4.9888;4.748;4.2485;4.2203 +;-;-;- + 120 + 1 1.483 61074.2 1.0 12914 5055 17970 HBL1_DMSO_200M_050219_2,17971 HBL1_DMSO_200M_050219_2,17971,FPGLAIKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17972 95.871 108.0 576350.0 25 0 100450.0 + 31875 RTLDFDPLL 9 72 545.3008506461704 1088.5871483591409 2 545.3010742068291 MULTI CID FTMS 0 0 0 17970 518407.28125 0.8086678353629853 1 -0.0700454711914062 2 Unmodified _RTLDFDPLL_ ENSG00000135334|ENST00000257787|AKIRIN2 29.84058131909904 0.1515068451768857 4 [{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}DP{I|L}{I|L} 9 4 + 76.176 0.0 0.0 6.9977 6.9977 93.992 0.0 0.0 0.0 16.222412206649466 63.077053078093215 16.222412206649466 31.80523450795789 0 1.305462187404089 2.0 0.4247425010840047 0.0 [{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}DP{I|L}{I|L};[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}[VP]E{I|L} 6.9977;4.076 -;- 103 1 1.483 57510.4 1.0 12915 5055 17970 HBL1_DMSO_200M_050219_2,17972 HBL1_DMSO_200M_050219_2,17972,RTLDFDPLL False True RTLDFDPLL 95.870592 545.301074206829 17536816.5 17970.0 ENSG00000135334|ENST00000257787|AKIRIN2 5.840343157450358 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17973 95.877 343.0 351160.0 25 0 46871.0 + 10209 FQIIQSIRMGM 11 73 662.3484565003733 1322.6823600675466 2 662.3500244021416 MULTI CID FTMS 0 0 0 17970 255258.59375 0.6625359868704194 -2 0.1298675537109375 3 Unmodified _FQIIQSIRMGM_ ENSG00000120742|ENST00000239944|SERP1;ENSG00000151778|ENST00000379179|SERP2 87.25819977447905 0.0022587470437062 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}QS{I|L}R 8 3 86.407 0.0 0.0 6.5327 0.0 0.0 0.0 334.0897616022094 334.0897616022094 73.10647877319475 0.0 0.0 0.0 0 1.8494850021680087 1.3979400086720375 0.3807196863200844 1.1989700043360187 + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}QS{I|L}R 6.5327 + + 328 + 1 1.483 91776.1 1.0 12916 5055 17970 HBL1_DMSO_200M_050219_2,17973 HBL1_DMSO_200M_050219_2,17973,FQIIQSIRMGM True True FQIIQSIRMGM 95.876805 662.350024402142 6321889.0 17970.0 ENSG00000151778|ENST00000379179|SERP2;;ENSG00000120742|ENST00000239944|SERP1 6.459243615468343 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17974 95.891 800.0 381110.0 25 0 31414.0 -1 0 152 1028.1517806495303 3081.4335125487914 3 1028.488085925579 MULTI CID FTMS 0 0 0 17970 174474.34375 0.7124833338097533 4 -0.280609130859375 4 4 H{I|L}[MN]D 5 -1 47.703 0.0 0.0 1.5481 0.0 0.0 0.0 2468.056222783849 2468.056222783849 15.12997472583166 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.4247425010840047 H{I|L}[MN]D 1.5481 - 5210 + 1 1.483 191520.4 0.699999988079071 12917 5055 17970 HBL1_DMSO_200M_050219_2,17974 HBL1_DMSO_200M_050219_2,17974, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17975 95.905 800.0 160530.0 25 0 12573.0 + -1 LKLRLPHCLEM 11 108 697.8886475559414 1393.7627421786826 2 697.8900634646416 MULTI CID FTMS 0 0 0 17970 171717.125 0.7570106461915047 4 -0.280609130859375 5 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LKLRLPHCLEM_ REV__CHRNA2|p.V387M|1|0.12|ENSG00000120903|chr8:27463284-27463284|C/T|missense_variant 15.248480904072842 0.7179608125786238 4 {I|L}T{[HG]|PP}V{I|L}EEM 9 -1 58.963 0.0 0.0 4.2305 0.0 0.0 366.2370472638688 0.0 366.2370472638688 0.0 37.06485629844558 0.0 0.0 0 1.2302046884880935 0.0 0.3807196863200844 0.0 {I|L}T{[HG]|PP}V{I|L}EEM 4.2305 - 550 1 1.483 94840.2 0.6499999761581421 12918 5055 17970 HBL1_DMSO_200M_050219_2,17975 HBL1_DMSO_200M_050219_2,17975,LKLRLPHCLEM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17976 95.913 451.0 437290.0 25 0 55976.0 + 45796 YYLPKLLSY 9 144 580.3232123016824 1158.6318716701646 2 580.3236572146416 MULTI CID FTMS 0 0 0 17970 165333.953125 0.3085580625674555 -2 0.1298675537109375 6 Unmodified _YYLPKLLSY_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA;nc|ENSG00000115970|Q6YHU6-6|THADA 57.24910588100465 0.0276051374632116 4 [{I|L}P]K{I|L}S{I|L}YYY 9 5 + 49.579 0.0 0.0 4.2791 4.2791 65.268 0.0 0.0 0.0 2.218487496163561 14.09256854528806 2.218487496163561 0.2422750325201406 0 0.3807196863200844 1.0 0.3252574989159953 0.0 [{I|L}P]K{I|L}S{I|L}YYY;[{I|L}P]K{I|L}{I|L}SYYY;[{I|L}P]K{I|L}YY{I|L}SY;[KP]{I|L}{I|L}S{I|L}YYY;[{I|L}P]K{I|L}{I|L}YYSY;[KP]{I|L}{I|L}{I|L}SYYY;[KP]{I|L}{I|L}YY{I|L}SY;[KP]{I|L}{I|L}{I|L}YYSY;[{I|L}P]K{I|L}SY{I|L}YY;[KP]{I|L}{I|L}SY{I|L}YY 4.2791;4.2582;4.1355;4.0876;4.0671;4.0667;3.944;3.8757;3.8673;3.6758 -;-;-;-;-;-;-;-;-;- 1205 1 1.483 149333.5 1.0 12919 5055 17970 HBL1_DMSO_200M_050219_2,17976 HBL1_DMSO_200M_050219_2,17976,YYLPKLLSY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17977 95.926 800.0 180430.0 25 0 12459.0 -1 ITAYEVCYGL 10 141 594.7813257044941 1187.548098475788 2 594.7816650271416 MULTI CID FTMS 0 0 0 17970 126652.9375 0.3456146721145536 11 -1.0018157958984375 7 Carbamidomethyl (C) _ITAYEVC(Carbamidomethyl (C))YGL_ ENSG00000132470|ENST00000200181|ITGB4;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;nc|ENSG00000132470|P16144-4|ITGB4 15.847184025352805 0.5816416552707754 4 KD{M(Oxidation (M))|F}P[{M(Oxidation (M))|F}E] 6 -1 26.436 0.0 0.0 2.2261 0.0 0.0 406.1691761701188 0.0 406.1691761701188 0.0 1.817341938664132 0.0 0.0 0 0.6237125054200234 0.0 0.0 0.0 KD{M(Oxidation (M))|F}P[{M(Oxidation (M))|F}E] 2.2261 - 882 1 1.483 112551.2 0.550000011920929 12920 5055 17970 HBL1_DMSO_200M_050219_2,17977 HBL1_DMSO_200M_050219_2,17977,ITAYEVCYGL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17978 95.934 419.0 236430.0 25 0 34137.0 + 44324 YLPEELAAL 9 121 509.7762317422603 0 509.7757140994072 PEAK CID FTMS 0 0 0 17970 127067.609375 1.0 0 0.0 8 Unmodified _YLPEELAAL_ ENSG00000177731|ENST00000327031|FLII;ENST00000478416.1_1_17:18157237-18162004:-|nuORF;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENST00000582626.1_1_17:18160183-18162004:-|nuORF;ENST00000584444.5_1_17:18156710-18162004:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 28.486842064014134 0.1241350795510704 4 AA{I|L}E 4 7 28.058 0.0 0.0 2.7575 0.0 0.0 407.2420253968268 223.0725191705688 630.3145445673956 0.0 0.0 0.0 0.0 0 0.0 0.0 0.850576203518622 0.0 AA{I|L}E 2.7575 - 128 + 1 1.483 82168.8 1.0 12921 5055 17970 HBL1_DMSO_200M_050219_2,17978 HBL1_DMSO_200M_050219_2,17978,YLPEELAAL True True YLPEELAAL 95.933813 509.775714099407 1495222.375 17970.0 ENST00000584444.5_1_17:18156710-18162004:-|nuORF;;nc|ENSG00000177731|Q13045-3|FLII;;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;ENST00000582626.1_1_17:18160183-18162004:-|nuORF;;ENST00000478416.1_1_17:18157237-18162004:-|nuORF;;nc|ENSG00000177731|Q13045-2|FLII 3.2595592538515725 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17980 95.938 3.1 24715000.0 25 0 3903800.0 + 10627 FVNDIFERI 9 68 576.8058378406351 1151.5971227480702 2 576.8067504763603 MULTI CID FTMS 0 0 0 17979 20211606.0 0.9301290655168404 -1 0.0700454711914062 1 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 43.9818466556824 0.0535980856389242 4 V[MT]{I|L}{I|L}DNVE 9 8 60.155 0.0 0.0 5.2236 0.0 0.0 119.07403762031406 0.0 119.07403762031406 0.0 41.45873464120562 0.0 0.0 0 1.305462187404089 0.0 0.0 0.4247425010840047 V[MT]{I|L}{I|L}DNVE 5.2236 - 227 1 1.483 64413.0 1.0 12922 5056 17979 HBL1_DMSO_200M_050219_2,17980 HBL1_DMSO_200M_050219_2,17980,FVNDIFERI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17981 95.94 27.0 2522200.0 25 0 396280.0 + 1520 ALIEKLVEL 9 78 514.3232928880705 1026.6320328429408 2 514.3237792849541 MULTI CID FTMS 0 0 0 17979 2237614.75 0.9087970905363232 2 -0.13250732421875 2 Unmodified _ALIEKLVEL_ ENSG00000014138|ENST00000265465|POLA2;ENST00000532469.1_1_11:65029724-65047127:+|nuORF 66.45667989310934 0.0225072657982126 4 [{I|L}A]{I|L}{M(Oxidation (M))|F}V{I|L}{I|L}E 8 4 78.097 0.0 0.0 7.6071 0.0 0.0 0.0 125.07251917056875 125.07251917056875 42.37842840780033 0.0 0.0 0.0 0 0.8494850021680094 2.0 1.5356668758921828 0.0 [{I|L}A]{I|L}{M(Oxidation (M))|F}V{I|L}{I|L}E 7.6071 - 1235 + 1 1.483 57486.1 1.0 12923 5056 17979 HBL1_DMSO_200M_050219_2,17981 HBL1_DMSO_200M_050219_2,17981,ALIEKLVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17982 95.941 30.0 1939900.0 25 0 301330.0 + 12466 GVAESIHLWEV 11 86 620.322107654917 1238.629662376634 2 620.3225585818291 MULTI CID FTMS 0 0 0 17979 1944252.125 0.9811553902677868 1 -0.0609970092773437 3 Unmodified _GVAESIHLWEV_ ENSG00000065268|ENST00000585809|WDR18 60.07390631473393 0.0688452368411198 4 [VG]AT{[HG]|PP}GADAREV 13 8 + 64.921 0.0 0.0 5.2414 5.2414 68.851 0.0 0.0 0.0 6.224955900557781 11.411198108251495 6.224955900557781 0.0443219174010778 0 0.805462187404089 2.0 0.3494850021680094 0.0 [VG]AT{[HG]|PP}GADAREV;[VG]AT{[HG]|PP}GADEARV;[VG]AT{[HG]|PP}GADAERV;[VG]AT{[HG]|PP}QDAREV;[VG]AT{[HG]|PP}QDAERV;[VG]AT{[HG]|PP}QDEARV;[H{I|L}]SEA{I|L}DAREV;[H{I|L}]SEA{I|L}DAERV;[H{I|L}]SEA{I|L}DEARV;[H{I|L}]S{I|L}EADAREV 5.2414;5.2378;5.2378;4.9482;4.9446;4.9446;4.7388;4.7352;4.7352;4.6389 -;-;-;-;-;-;-;-;-;- 7192 1 1.483 49190.9 1.0 12924 5056 17979 HBL1_DMSO_200M_050219_2,17982 HBL1_DMSO_200M_050219_2,17982,GVAESIHLWEV True True GVAESIHLWEV 95.940702 620.322558581829 51013026.0 17979.0 ENSG00000065268|ENST00000585809|WDR18 7.6450301806132 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17983 95.942 51.0 1023400.0 25 0 81271.0 + 44770 YPLQGPGLLSV 11 96 572.3230653247996 1142.631577716399 2 572.3245727419853 MULTI CID FTMS 0 0 0 17979 768028.375 0.402489143544703 8 -0.68463134765625 4 Unmodified _YPLQGPGLLSV_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 21.799462835604743 0.5803446114589816 4 HYC{I|L}W 5 10 32.792 0.0 0.0 2.8698 0.0 0.0 422.2911549298844 0.0 422.2911549298844 0.0 17.385606273598313 0.0 0.0 0 0.5 0.0 0.0 0.0 HYC{I|L}W 2.8698 - 307 1 1.483 48269.1 1.0 12925 5056 17979 HBL1_DMSO_200M_050219_2,17983 HBL1_DMSO_200M_050219_2,17983,YPLQGPGLLSV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17984 95.945 120.0 533450.0 25 0 72529.0 + 36752 LLDSNLFWL 9 109 561.7799385236325 1121.545324114065 2 561.7813598513603 MULTI CID FTMS 0 0 0 17979 356037.6875 0.7801620691827517 2 -0.13250732421875 5 Unmodified _TEAAGLQNYR_ ENSG00000153066|ENST00000283033|TXNDC11;ENST00000572732.1_1_16:11785059-11785929:-|nuORF;nc|ENSG00000153066|Q6PKC3|TXNDC11 10.073929032068715 0.6785112666868882 4 [VG]ASD{I|L}{I|L} 7 8 29.791 0.0 0.0 2.6563 0.0 0.0 0.0 463.1658434834587 463.1658434834587 5.838673108385354 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.805462187404089 0.0 [VG]ASD{I|L}{I|L} 2.6563 - 417 1 1.483 55466.2 1.0 12926 5056 17979 HBL1_DMSO_200M_050219_2,17984 HBL1_DMSO_200M_050219_2,17984,TEAAGLQNYR False False LLDSNLFWL 95.944558 561.78135985136 1272242.375 17979.0 ENSG00000153066|ENST00000283033|TXNDC11;;ENST00000572732.1_1_16:11785059-11785929:-|nuORF;;nc|ENSG00000153066|Q6PKC3|TXNDC11 0.5408925414085388 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17985 95.95 288.0 420610.0 25 0 29615.0 + -1 GVIAGLNVL 9 105 854.7556543251478 2561.245133575643 3 855.0905029177666 MULTI CID FTMS 0 0 0 17979 240396.4375 0.5746073679727237 4 -0.3329086303710937 6 nc|ENSG00000204389|P0DMV8-2|HSPA1A;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204388|ENST00000375650|HSPA1B 4 H{I|L}VQM[{I|L}T]DV 9 -1 73.14 0.0 0.0 2.8556 0.0 0.0 0.0 1521.6281221979127 1521.6281221979127 42.38946545184909 0.0 0.0 0.0 0 1.2059771852360797 1.5228787452803376 0.4247425010840047 0.0 H{I|L}VQM[{I|L}T]DV 2.8556 - 815 + 1 1.483 87682.6 1.0 12927 5056 17979 HBL1_DMSO_200M_050219_2,17985 HBL1_DMSO_200M_050219_2,17985, False False GVIAGLNVL 95.949887 854.7565 226936.203125 17979.0 nc|ENSG00000204389|P0DMV8-2|HSPA1A;;ENSG00000204389|ENST00000375651|HSPA1A;;ENSG00000204390|ENST00000375654|HSPA1L;;ENSG00000204388|ENST00000375650|HSPA1B 1.022354265054067 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17986 95.954 199.0 349360.0 25 0 44110.0 + 3036 AVLDNFVYV 9 104 520.2760486321398 1038.5375443310795 2 520.2767211794853 MULTI CID FTMS 0 0 0 17979 203206.265625 0.423713494738801 2 -0.13250732421875 7 Unmodified _AVLDNFVYV_ ENSG00000167487|ENST00000300976|KLHL26 28.486842064014134 0.1687311288560894 4 {NN|[MP]|[D{I|L}]|[EV]}N{M(Oxidation (M))|F}G{I|L} 6 5 21.309 0.0 0.0 2.0518 0.0 0.0 0.0 376.18473606375454 376.18473606375454 5.647124887093829 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.9247425010840048 {NN|[MP]|[D{I|L}]|[EV]}N{M(Oxidation (M))|F}G{I|L} 2.0518 - 533 1 1.483 57726.0 1.0 12928 5056 17979 HBL1_DMSO_200M_050219_2,17986 HBL1_DMSO_200M_050219_2,17986,AVLDNFVYV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17987 95.961 415.0 264200.0 25 0 25328.0 -1 0 117 946.4801952432456 1890.945837553291 2 946.9860717654228 MULTI CID FTMS 0 0 0 17979 120243.46875 1.0 0 0.0 8 4 [TA]{I|L}D{I|L}Y 6 -1 27.165 0.0 0.0 1.4366 0.0 0.0 0.0 1211.5713618054974 1211.5713618054974 13.250510870125602 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.035666875892183 0.0 [TA]{I|L}D{I|L}Y 1.4366 - 976 1 1.483 76427.6 1.0 12929 5056 17979 HBL1_DMSO_200M_050219_2,17987 HBL1_DMSO_200M_050219_2,17987, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 17988 95.968 357.0 354250.0 25 0 20261.0 + 44420 YMFPDTMLQA 10 150 608.7723808275418 1215.5302087218836 2 608.7731811404228 MULTI CID FTMS 0 0 0 17979 120062.5078125 0.9640777550489869 -1 0.0700454711914062 9 Unmodified _YMFPDTMLQA_ ENSG00000133104|ENST00000438666|SPART;ENST00000495510.1_1_13:36900679-36920374:-|nuORF 26.88365393820708 0.3646707531412818 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F} 3 7 23.301 0.0 0.0 1.9169 0.0 0.0 0.0 771.3298293489939 771.3298293489939 0.944218390360234 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F} 1.9169 + + 1155 1 1.483 97335.8 1.0 12930 5056 17979 HBL1_DMSO_200M_050219_2,17988 HBL1_DMSO_200M_050219_2,17988,YMFPDTMLQA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17989 95.981 775.0 261970.0 25 0 20516.0 + 16297 IWPEKVLDI 9 143 556.8206178231145 1111.626682713029 2 556.8205444216728 MULTI CID FTMS 0 0 0 17979 99516.234375 0.1494940190083685 -4 0.2714080810546875 10 Unmodified _IWPEKVLDI_ ENSG00000135108|ENST00000622495|FBXO21 30.63653989081413 0.1413794767160703 4 [EP]KV{I|L}D{I|L}[NG]K 10 5 + 47.4 0.0 0.0 4.2641 4.2641 77.192 0.0 0.0 0.0 3.9101012496902143 24.640234121044 3.9101012496902143 8.705287016194944 0 0.0 1.154901959985743 0.4247425010840047 0.0 [EP]KV{I|L}D{I|L}[NG]K;{[TV]|[{I|L}S]}[RP]{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}K;{[TV]|[{I|L}S]}[PG]V{I|L}D{I|L}[NG]K;[EP]K{I|L}VD{I|L}[NG]K;[{I|L}P][SG]V{I|L}D{I|L}[NG]K;{[TV]|[{I|L}S]}[RP]{I|L}D{I|L}[NG]K;[{I|L}P]QP[HV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}K;[{I|L}P]Q[HV]P{M(Oxidation (M))|F}{M(Oxidation (M))|F}K;{NN|[MP]|[D{I|L}]|[EV]}[KP]{I|L}D{I|L}[NG]K;[W{I|L}]{[RE]|[WV]}P{I|L}[NG]K 4.2641;3.4809;3.3347;3.1217;3.1046;2.7432;2.6501;2.4917;2.4791;2.3884 -;-;-;-;-;-;-;-;-;- 1908 1 1.483 154961.4 1.0 12931 5056 17979 HBL1_DMSO_200M_050219_2,17989 HBL1_DMSO_200M_050219_2,17989,IWPEKVLDI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17990 95.995 800.0 124940.0 25 0 19238.0 28033 PNPYPPNI 8 127 456.23630875312944 910.4580645730588 2 456.2369262576103 MULTI CID FTMS 0 0 0 17979 91673.984375 1.0 0 0.0 11 Unmodified _PNPYPPNI_ ENSG00000205352|ENST00000429243|PRR13 24.67388899826682 0.525179942228231 4 MPN{I|L} 4 5 34.781 0.0 0.0 3.8202 0.0 0.0 437.2263884029401 0.0 437.2263884029401 0.0 25.17728766960431 0.0 0.0 0 0.9247425010840048 0.0 0.0 1.0356668758921828 MPN{I|L} 3.8202 - 238 + 1 1.483 78211.5 0.3799999952316284 12932 5056 17979 HBL1_DMSO_200M_050219_2,17990 HBL1_DMSO_200M_050219_2,17990,PNPYPPNI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17992 96.002 188.0 361690.0 25 0 53580.0 + 42893 VVPDEDFVLV 10 87 566.30009364775 1130.5856343623 2 566.3008300662041 MULTI CID FTMS 0 0 0 17991 258295.171875 0.7752793575386296 3 -0.27191162109375 1 Unmodified _VVPDEDFVLV_ ENSG00000176170|ENST00000592299|SPHK1;nc|ENSG00000176170|Q9NYA1-2|SPHK1;nc|ENSG00000176170|Q9NYA1-3|SPHK1 15.847184025352805 0.5816416552707754 4 [DP]ED{M(Oxidation (M))|F}VVV{I|L}V 10 4 + 57.357 0.0 0.0 5.0732 5.0732 84.27 0.0 0.0 0.0 4.259687322722812 41.871987629411294 4.259687322722812 13.494850021680094 0 0.8182503180159344 0.0 1.1549471895720984 0.0 [DP]ED{M(Oxidation (M))|F}VVV{I|L}V;[DP]EDV{M(Oxidation (M))|F}VV{I|L}V;[DP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[KC]VV{I|L}V 5.0732;3.8796;0.91564 -;-;- 111 1 1.48 61110.0 1.0 12933 5057 17991 HBL1_DMSO_200M_050219_2,17992 HBL1_DMSO_200M_050219_2,17992,VVPDEDFVLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17993 96.016 800.0 175920.0 25 0 10719.0 + -1 LIGCCFYFLI 10 149 624.8092058557472 1247.6038587782944 2 625.3121215701103 MULTI CID FTMS 0 0 0 17991 174022.046875 0.782953942397047 3 -0.27191162109375 2 Carbamidomethyl (C) _LIGC(Carbamidomethyl (C))CFYFLI_ REV__ENST00000606080.1_1_6:116381649-116381904:-|nuORF 18.13498045792455 0.5432546531930572 4 [{I|L}A]{I|L}DWA{I|L}{I|L} 8 -1 51.983 0.0 0.0 4.1666 0.0 0.0 0.0 349.0808844953444 349.0808844953444 21.974074946510207 0.0 0.0 0.0 0 0.0 2.0 0.5774509799928715 0.0 [{I|L}A]{I|L}DWA{I|L}{I|L} 4.1666 - 6070 1 1.48 117266.9 0.7599999904632568 12934 5057 17991 HBL1_DMSO_200M_050219_2,17993 HBL1_DMSO_200M_050219_2,17993,LIGCCFYFLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 17994 96.019 146.0 409880.0 25 0 108220.0 + 2697 ATEKEFFFV 9 81 559.2819305176805 1116.549308102161 2 559.2822753787041 MULTI CID FTMS 0 0 0 17991 291185.28125 0.5758506376182271 -1 0.0609970092773437 3 Unmodified _ATEKEFFFV_ ENSG00000163568|ENST00000368130|AIM2 29.081581746732265 0.1611639662936252 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V 9 5 + 35.55 0.0 0.0 3.1839 3.1839 66.196 0.0 0.0 0.0 6.699991228771019 17.590825449355386 6.699991228771019 2.455678082598922 0 0.8182503180159344 0.0 0.9674165578762486 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[PG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}TAE{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}E]KTAE{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}E[TA]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}E]KE[TA]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}T][R{M(Oxidation (M))|F}][PG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}T][VG]TAE{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}T][VG]E[TA]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[{I|L}T][YQ]AE{M(Oxidation (M))|F}{M(Oxidation (M))|F}V 3.1839;2.9639;2.5122;2.4957;2.2666;2.2501;1.4423;1.3556;1.11;0.77054 -;-;-;-;-;-;-;-;-;- 643 1 1.48 51853.7 1.0 12935 5057 17991 HBL1_DMSO_200M_050219_2,17994 HBL1_DMSO_200M_050219_2,17994,ATEKEFFFV False True ATEKEFFFV 96.018829 559.282275378704 9919166.0 17991.0 ENSG00000163568|ENST00000368130|AIM2 5.012763738632202 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17995 96.033 800.0 170470.0 25 0 20599.0 -1 GVICFWSM 8 149 479.7133016852407 957.4120504372812 2 479.7135803103447 MULTI CID FTMS 0 0 0 17991 194858.9375 0.7187001934057625 -2 0.13104248046875 4 Oxidation (M) _GVICFWSM(Oxidation (M))_ ENST00000438298.6_1_6:111895866-111897584:+|nuORF 28.17323086031832 0.4514957916281387 4 [VG]{I|L}D 4 -1 37.326 0.0 0.0 3.8986 0.0 0.0 0.0 570.1886080377561 570.1886080377561 8.12977812912628 0.0 0.0 0.0 0 0.5994850021680094 1.6989700043360187 0.6549471895720984 0.0 [VG]{I|L}D 3.8986 - 766 + 1 1.48 108402.5 0.6700000166893005 12936 5057 17991 HBL1_DMSO_200M_050219_2,17995 HBL1_DMSO_200M_050219_2,17995,GVICFWSM False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 17996 96.039 330.0 306150.0 25 0 42977.0 + 34714 SPYDMLESI 9 121 527.742137466872 0 527.7416259646416 PEAK CID FTMS 0 0 0 17991 138165.484375 0.8158776224763414 -2 0.13104248046875 5 Unmodified _SPYDMLESI_ ENSG00000182718|ENST00000451270|ANXA2;ENST00000560014.5_1_15:60639831-60644581:-|nuORF;nc|ENSG00000182718|P07355-2|ANXA2;nc|ENSG00000231991|A6NMY6|ANXA2P2 57.47134341890925 0.0195089841803479 4 E{I|L}MS 4 7 29.769 0.0 0.0 2.8258 0.0 0.0 218.12684970599904 372.1208862866706 590.2477359926697 0.0 0.0 0.0 0.0 0 0.5 0.0 1.0356668758921828 0.0 E{I|L}MS 2.8258 - 150 + 1 1.48 82503.8 1.0 12937 5057 17991 HBL1_DMSO_200M_050219_2,17996 HBL1_DMSO_200M_050219_2,17996,SPYDMLESI True True SPYDMLESI 96.038633 527.741625964642 1874283.75 17991.0 ENSG00000182718|ENST00000451270|ANXA2;;nc|ENSG00000182718|P07355-2|ANXA2;;ENST00000560014.5_1_15:60639831-60644581:-|nuORF;;nc|ENSG00000231991|A6NMY6|ANXA2P2 0.8033909698327383 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 17997 96.052 800.0 125260.0 25 0 25666.0 19481 LFHSCSAPSRS 11 80 397.8563777717506 0 397.8564636111259 PEAK CID FTMS 0 0 0 17991 106106.8671875 1.0 0 0.0 6 Unmodified _LFHSCSAPSRS_ nc|ENSG00000100628|Q96Q27-1|ASB2 10.073929032068715 0.4495801685015257 4 V 1 11 6.9897 0.0 0.0 0.88065 0.0 0.0 575.555515697995 116.05108057193593 691.606596269931 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.88065 - 17 + 1 1.48 82028.6 0.4199999868869781 12938 5057 17991 HBL1_DMSO_200M_050219_2,17997 HBL1_DMSO_200M_050219_2,17997,LFHSCSAPSRS False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 17998 96.066 800.0 65583.0 25 0 2951.7 -1 0 84 1179.21360265439 0 1179.215991199017 PEAK CID FTMS 0 0 0 17991 77935.3359375 1.0 0 0.0 7 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.29662 0.0 0.0 1074.878313800928 1131.4473428170454 2206.325656617973 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.29662 - 12 + 1 1.48 36661.9 0.5299999713897705 12939 5057 17991 HBL1_DMSO_200M_050219_2,17998 HBL1_DMSO_200M_050219_2,17998, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18000 96.071 3.0 23311000.0 25 0 2375500.0 -1 LMKCISLYL 9 74 550.300497040935 1098.58644114867 2 550.3012573122978 MULTI CID FTMS 0 0 0 17999 19044236.0 0.8505441333771016 -2 0.13250732421875 1 Oxidation (M) _LM(Oxidation (M))KCISLYL_ ENST00000357066.7_1_19:2071060-2071678:-|nuORF 36.12702656103203 0.0967173616627612 4 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 7 -1 66.832 0.0 0.0 6.0835 0.0 0.0 0.0 128.0721377008422 128.0721377008422 27.63612443794868 0.0 0.0 0.0 0 1.1989700043360187 1.6989700043360187 0.5501648626366046 0.0 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 6.0835 - 367 + 1 1.48 64473.9 1.0 12940 5058 17999 HBL1_DMSO_200M_050219_2,18000 HBL1_DMSO_200M_050219_2,18000,LMKCISLYL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18001 96.072 9.5 6045300.0 25 0 591460.0 + 16531 KAVELLVEL 9 78 507.31582783554376 1012.6171027378876 2 507.3162414431572 MULTI CID FTMS 0 0 0 17999 5799660.0 0.9515317113251052 1 -0.0780563354492187 2 Unmodified _KAVELLVEL_ ENSG00000100554|ENST00000216442|ATP6V1D 51.629811660486645 0.0367964933207742 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}AK{I|L}VE{I|L} 9 4 + 82.858 0.0 0.0 8.1826 8.1826 86.352 0.0 0.0 0.0 4.704999916446795 16.478174818886373 4.704999916446795 4.286662482156345 0 0.8807196863200843 1.2218487496163564 1.1989700043360187 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}AK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}VAK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}K{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}GK{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}GK{I|L}{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}G{I|L}K{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}AKV{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}V{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}VAKV{I|L}E{I|L} 8.1826;7.7593;7.718;7.588;7.4207;7.2946;7.1234;7.0729;6.6496;6.6083 -;-;-;-;-;-;-;-;-;- 346 1 1.48 54150.7 1.0 12941 5058 17999 HBL1_DMSO_200M_050219_2,18001 HBL1_DMSO_200M_050219_2,18001,KAVELLVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18002 96.074 110.0 517460.0 25 0 56034.0 + 2905 AVFPDDMPTL 10 76 553.2651345710362 1104.5157162088724 2 553.2651855349541 MULTI CID FTMS 0 0 0 17999 451427.75 0.4083266747267182 7 -0.6730422973632812 3 Unmodified _AVFPDDMPTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 48.345845343767074 0.089859443182303 4 PT{I|L} 3 7 29.253 0.0 0.0 2.6484 0.0 0.0 775.3200574211793 0.0 775.3200574211793 0.0 1.2910753730673008 0.0 0.0 0 0.4247425010840047 0.0 0.7302046884880937 0.0 + PT{I|L} 2.6484 + + 254 + 1 1.48 50338.9 1.0 12942 5058 17999 HBL1_DMSO_200M_050219_2,18002 HBL1_DMSO_200M_050219_2,18002,AVFPDDMPTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18003 96.078 200.0 650180.0 25 0 32235.0 -1 0 95 791.3727088192045 2371.096297057813 3 791.7084228396416 MULTI CID FTMS 0 0 0 17999 439306.375 0.904141757614854 -4 0.244171142578125 4 4 {[HG]|PP}PAPPPGC{[{M(Oxidation (M))|F}D]|MM}GM 13 -1 35.686 0.0 0.0 1.505 0.0 0.0 0.0 1104.548484017154 1104.548484017154 9.962632359215426 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {[HG]|PP}PAPPPGC{[{M(Oxidation (M))|F}D]|MM}GM 1.505 - 10240 1 1.48 95100.9 1.0 12943 5058 17999 HBL1_DMSO_200M_050219_2,18003 HBL1_DMSO_200M_050219_2,18003, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18004 96.081 162.0 289700.0 25 0 24237.0 -1 0 53 771.36593400313 3081.43463014612 4 771.6176635622978 MULTI CID FTMS 0 0 0 17999 339555.625 0.3491833071445906 6 -0.5521240234375 5 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 57.162 0.0 0.0 1.8551 0.0 0.0 0.0 2040.8218121131697 2040.8218121131697 45.16811156400188 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8551 - 96 1 1.48 42321.3 1.0 12944 5058 17999 HBL1_DMSO_200M_050219_2,18004 HBL1_DMSO_200M_050219_2,18004, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18005 96.085 174.0 600030.0 25 0 85725.0 + 41471 VPLPRLLEV 9 103 518.3312528781033 1034.6479528230066 2 518.3317748904228 MULTI CID FTMS 0 0 0 17999 336040.1875 0.1180197452219792 -4 0.244171142578125 6 Unmodified _VPLPRLLEV_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 43.77239144664712 0.0547478964384323 4 VP{I|L}V 4 5 51.714 0.0 0.0 4.9983 0.0 0.0 0.0 623.3518160455686 623.3518160455686 18.349621957594096 0.0 0.0 0.0 0 0.7302046884880937 1.3979400086720375 0.0 0.0 VP{I|L}V 4.9983 - 166 + 1 1.48 87504.5 1.0 12945 5058 17999 HBL1_DMSO_200M_050219_2,18005 HBL1_DMSO_200M_050219_2,18005,VPLPRLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18006 96.087 129.0 736410.0 25 0 112990.0 + 1547 ALLATLAAYL 10 108 510.3104663450216 1018.6063797568432 2 510.3106872439384 MULTI CID FTMS 0 0 0 17999 317178.75 0.0414403593166899 -3 0.2025527954101562 7 Unmodified _ALLATLAAYL_ REV__ENSG00000127481|ENST00000375254|UBR4;REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF;REV__nc|ENSG00000127481|Q5T4S7-2|UBR4;REV__nc|ENSG00000127481|Q5T4S7-3|UBR4;REV__nc|ENSG00000127481|Q5T4S7-4|UBR4;REV__nc|ENSG00000127481|Q5T4S7-5|UBR4 54.773552608820026 0.052133998764723 4 [{I|L}A][TA]{I|L}YA{I|L}A{I|L} 10 -1 + 81.15 0.0 0.0 7.9668 7.9668 90.319 0.0 0.0 0.0 12.78151250383644 13.521825181113629 12.78151250383644 8.634993639681312 0 1.2614393726401687 2.0 1.392159058960253 0.0 [{I|L}A][TA]{I|L}YA{I|L}A{I|L};[{I|L}A][TA]{I|L}AY{I|L}A{I|L};[{I|L}A][TA]Y{I|L}A{I|L}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}YA{I|L}A{I|L};[{I|L}A][TA]{I|L}A{I|L}YA{I|L};[{I|L}A][TA]YA{I|L}{I|L}A{I|L};[{I|L}A]Y[TA]{I|L}A{I|L}A{I|L};[{I|L}A]YKD{I|L}{I|L}A{I|L};[{I|L}A][TA]{M(Oxidation (M))|F}S{I|L}{I|L}A{I|L};[Y{I|L}]KD{I|L}A{I|L}A{I|L} 7.9668;7.1191;7.0814;6.712;6.588;6.5292;6.4121;6.2506;6.168;6.0613 -;-;-;-;-;-;-;-;-;- 2770 1 1.48 78467.8 1.0 12946 5058 17999 HBL1_DMSO_200M_050219_2,18006 HBL1_DMSO_200M_050219_2,18006,ALLATLAAYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18007 96.091 195.0 419870.0 25 0 47068.0 + -1 DALHAYFGI 9 104 503.7557471316981 1005.4969413301964 2 503.7557556033134 MULTI CID FTMS 0 0 0 17999 223093.953125 0.4475607990009353 2 -0.2004013061523437 8 Carbamidomethyl (C) _FYLC(Carbamidomethyl (C))PPPL_ ENSG00000164219|ENST00000419445|PGGT1B;nc|ENSG00000164219|P53609-2|PGGT1B 32.45364647766026 0.3613649037604678 4 [HA]{I|L}DAY{M(Oxidation (M))|F}G{I|L} 9 -1 + 54.135 0.0 0.0 5.3839 5.3839 76.904 0.0 0.0 0.0 4.033350405587441 14.09256854528806 4.033350405587441 4.033350405587441 0 0.7302046884880937 0.0 0.0 0.0 [HA]{I|L}DAY{M(Oxidation (M))|F}G{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HA]AY{M(Oxidation (M))|F}G{I|L};{[DA]|[EG]}[H{I|L}]AY{M(Oxidation (M))|F}G{I|L};[HA]{I|L}S{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}G{I|L};[HA]{I|L}[WY]{M(Oxidation (M))|F}G{I|L};{[VA]|[{I|L}G]}[HT]{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}G{I|L};[HA]Y[W{I|L}]{M(Oxidation (M))|F}G{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[R{M(Oxidation (M))|F}]Y{M(Oxidation (M))|F}G{I|L};[HA]{I|L}R{M(Oxidation (M))|F}AYE;{[TV]|[{I|L}S]}[HA]{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}G{I|L} 5.3839;4.9828;4.2719;3.5191;3.1742;3.0724;2.7784;2.7373;2.7195;2.4846 -;-;-;-;-;-;-;-;-;- 329 1 1.48 67784.7 1.0 12947 5058 17999 HBL1_DMSO_200M_050219_2,18007 HBL1_DMSO_200M_050219_2,18007,FYLCPPPL False False DALHAYFGI 96.091166 503.755755603313 2886845.75 17999.0 ENSG00000164219|ENST00000419445|PGGT1B;;nc|ENSG00000164219|P53609-2|PGGT1B 5.361344814300537 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18008 96.1 519.0 278930.0 25 0 26292.0 + 25333 NALAIAVMNM 10 146 532.2672729996981 1062.519993066196 2 532.2675048708916 MULTI CID FTMS 0 0 0 17999 174546.53125 0.4814943067959665 -2 0.13250732421875 9 Oxidation (M) _NALAIAVM(Oxidation (M))NM_ ENSG00000139549|ENST00000649637|DHH 49.93300154707207 0.0805441195901191 4 {[QG]|[NA]}{I|L}A{I|L} 5 5 53.773 0.0 0.0 5.0609 0.0 0.0 0.0 577.2104587246523 577.2104587246523 33.841846281715924 0.0 0.0 0.0 0 1.1861818737241734 2.0 0.0 0.9604093769761874 + {[QG]|[NA]}{I|L}A{I|L} 5.0609 + + 508 1 1.48 116497.2 1.0 12948 5058 17999 HBL1_DMSO_200M_050219_2,18008 HBL1_DMSO_200M_050219_2,18008,NALAIAVMNM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18009 96.109 502.0 308000.0 25 0 26987.0 + 4488 DAYEIRLLM 9 153 562.296358552937 0 562.2991210818291 PEAK CID FTMS 0 0 0 17999 118756.5859375 0.7996760965344907 -1 0.0715103149414062 10 Unmodified _DAYEIRLLM_ ENSG00000131779|ENST00000369306|PEX11B;nc|ENSG00000131779|O96011-2|PEX11B 53.40400417844725 0.023745606374537 4 YE{I|L} 3 6 30.445 0.0 0.0 2.7121 0.0 0.0 186.0676611413831 528.2985560076316 714.3662171490148 0.0 0.0 0.0 0.0 0 1.075257498915995 0.0 0.3494850021680094 0.0 + YE{I|L} 2.7121 + + 318 + 1 1.48 119007.4 1.0 12949 5058 17999 HBL1_DMSO_200M_050219_2,18009 HBL1_DMSO_200M_050219_2,18009,DAYEIRLLM True True DAYEIRLLM 96.109189 562.299121081829 1331048.875 17999.0 ENSG00000131779|ENST00000369306|PEX11B;;nc|ENSG00000131779|O96011-2|PEX11B 6.60246483484904 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18010 96.117 416.0 273550.0 25 0 47190.0 + 19629 LGESLLGLTV 10 136 501.2979055513276 1000.5812581694552 2 501.2990600466728 MULTI CID FTMS 0 0 0 17999 95884.25 0.1275772971905848 4 -0.3927993774414062 11 Unmodified _LGESLLGLTV_ ENSG00000136045|ENST00000412830|PWP1;nc|ENSG00000136045|Q13610-2|PWP1 52.268347100219714 0.0668375294751462 4 {[QN]|[E{I|L}]|[KN]}KS{I|L}V{I|L}AE 9 6 + 69.633 0.0 0.0 6.9592 6.9592 83.737 0.0 0.0 0.0 6.906140654642812 14.973024840566469 6.906140654642812 4.515449934959719 0 0.0 1.3979400086720375 0.7059771852360797 0.0 {[QN]|[E{I|L}]|[KN]}KS{I|L}V{I|L}AE;{[QN]|[E{I|L}]|[KN]}KSV{I|L}{I|L}AE;{[QN]|[E{I|L}]|[KN]}KVTV{I|L}AE;{[QN]|[E{I|L}]|[KN]}KS{I|L}{I|L}VAE;[{I|L}T][VG]S{I|L}V{I|L}AE;{[QN]|[E{I|L}]|[KN]}K{I|L}SV{I|L}AE;{[QN]|[E{I|L}]|[KN]}KVS{I|L}{I|L}AE;{[QN]|[E{I|L}]|[KN]}KVT{I|L}VAE;[{I|L}T][VG]SV{I|L}{I|L}AE;[{I|L}T][VG]VTV{I|L}AE 6.9592;6.508;6.4824;6.4459;6.269;6.0567;6.0311;5.969;5.8177;5.7922 -;-;-;-;-;-;-;-;-;- 5354 1 1.48 90385.0 1.0 12950 5058 17999 HBL1_DMSO_200M_050219_2,18010 HBL1_DMSO_200M_050219_2,18010,LGESLLGLTV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18011 96.13 800.0 217860.0 25 0 13484.0 + 23312 LTAFFLPGVHS 11 144 594.8234572782018 1187.6323616232037 2 594.8226806521416 MULTI CID FTMS 0 0 0 17999 91733.2734375 0.92495588840118 -1 0.0715103149414062 12 Unmodified _LTAFFLPGVHS_ ENSG00000110400|ENST00000264025|NECTIN1;nc|ENSG00000110400|Q15223-2|NECTIN1;nc|ENSG00000110400|Q15223-3|NECTIN1 63.960520009940105 0.0530716371881472 4 {I|L}TA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[YN]S{I|L} 10 5 + 73.814 0.0 0.0 6.2152 6.2152 73.251 0.0 0.0 0.0 18.602942240929217 0.3368796720524898 0.3368796720524898 0.3368796720524898 0 0.6109243748081782 1.6989700043360187 1.187273075074786 0.0 {I|L}TA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[YN]S{I|L};{I|L}TA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[RP][HS];{I|L}TA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[PG]V[HS];{I|L}TA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[YN]TV;{I|L}TA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}[PG][HS]V;{I|L}TA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[HG]|PP}[WP];{I|L}TA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[HG]|PP}[WP]{I|L};{I|L}TA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V][KC]{I|L};{I|L}T[HV]E{I|L}[YN]S{I|L};{I|L}T[HV]E{I|L}[RP][HS] 6.2152;6.1868;5.937;5.6416;4.9828;4.6727;4.2146;4.2146;4.2009;4.1725 -;-;+;-;-;-;-;-;-;- + 2492 + 1 1.48 129769.1 0.5199999809265137 12951 5058 17999 HBL1_DMSO_200M_050219_2,18011 HBL1_DMSO_200M_050219_2,18011,LTAFFLPGVHS True True LTAFFLPGVHS 96.130449 594.822680652142 1928326.0 17999.0 nc|ENSG00000110400|Q15223-2|NECTIN1;;nc|ENSG00000110400|Q15223-3|NECTIN1;;ENSG00000110400|ENST00000264025|NECTIN1 8.675129095713297 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18012 96.144 800.0 47513.0 25 0 3326.3 -1 0 67 739.1057409421632 2952.3938579022524 4 739.3599731326103 MULTI CID FTMS 0 0 0 17999 87605.9765625 0.3327077982327528 8 -0.7992630004882812 13 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 50.583 0.0 0.0 1.7133 0.0 0.0 0.0 2010.8465988098271 2010.8465988098271 39.65350013324773 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.7133 - 376 1 1.48 38909.0 0.4900000095367431 12952 5058 17999 HBL1_DMSO_200M_050219_2,18012 HBL1_DMSO_200M_050219_2,18012, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18014 96.149 20.0 2941100.0 25 0 294740.0 + 9967 FPGLAIKI 8 78 429.77601453505866 857.5374761369173 2 429.7762023806572 MULTI CID FTMS 0 0 0 18013 2491463.5 0.2196284799591255 3 -0.3147430419921875 1 Unmodified _FPGLAIKI_ ENSG00000142945|ENST00000372224|KIF2C;ENST00000455186.5_1_1:45205634-45205691:+|nuORF;ENST00000493027.5_1_1:45205556-45221765:+|nuORF 46.92087301778293 0.1537303740847981 4 {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L} 8 0 + 44.32 0.0 0.0 5.1683 5.1683 75.391 0.0 0.0 0.0 6.976212463643421 13.399480616943508 6.976212463643421 3.628268069746881 0 0.8737125054200234 0.0 0.0 0.0 + + {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L};{M(Oxidation (M))|F}P[Q{I|L}]{I|L}K{I|L};{M(Oxidation (M))|F}{I|L}[PG]A{I|L}K{I|L};{M(Oxidation (M))|F}{I|L}[QP]{I|L}K{I|L} 5.1683;4.7452;4.206;4.0149 +;-;-;- + 143 + 1 1.48 49933.5 1.0 12953 5059 18013 HBL1_DMSO_200M_050219_2,18014 HBL1_DMSO_200M_050219_2,18014,FPGLAIKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18015 96.15 43.0 1532900.0 25 0 161150.0 + 27131 PFLWRVGP 8 77 486.2768309585354 970.539108983871 2 486.2766601443291 MULTI CID FTMS 0 0 0 18013 1001119.625 0.6671094373544308 3 -0.3147430419921875 2 Unmodified _PFLWRVGP_ REV__ENST00000567034.5_1_16:30198826-30199264:+|nuORF 15.768221252438446 0.6779680726941459 4 WP{M(Oxidation (M))|F}{I|L}P 5 -1 50.433 0.0 0.0 5.1964 0.0 0.0 0.0 327.17792688541255 327.17792688541255 25.026975159433533 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 WP{M(Oxidation (M))|F}{I|L}P 5.1964 - 59 + 1 1.48 61002.9 1.0 12954 5059 18013 HBL1_DMSO_200M_050219_2,18015 HBL1_DMSO_200M_050219_2,18015,PFLWRVGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18016 96.153 148.0 473760.0 25 0 121430.0 + 18670 LAILRLSL 8 73 449.8076860675103 897.6008192018205 2 449.8079101443291 MULTI CID FTMS 0 0 0 18013 372962.0625 0.0636772743934805 -3 0.2105636596679687 3 Unmodified _LAILRLSL_ ENSG00000075240|ENST00000406902|GRAMD4 58.6788170122104 0.1149141431586871 4 [{I|L}A]R{I|L}{I|L}{I|L}S{I|L} 8 2 + 72.076 0.0 0.0 8.0299 8.0299 81.326 0.0 0.0 0.0 14.648867983026506 58.88866283220501 14.648867983026506 1.7474250108400469 0 1.424742501084005 1.6989700043360187 0.3494850021680094 0.0 [{I|L}A]R{I|L}{I|L}{I|L}S{I|L};[{I|L}A]R{I|L}{I|L}S{I|L}{I|L} 8.0299;7.8352 -;- 89 1 1.48 60209.5 1.0 12955 5059 18013 HBL1_DMSO_200M_050219_2,18016 HBL1_DMSO_200M_050219_2,18016,LAILRLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18017 96.156 143.0 564080.0 25 0 86964.0 + 45788 YYLGKILEM 9 106 565.30130370363 1128.5880544740598 2 565.3018066287041 MULTI CID FTMS 0 0 0 18013 280169.15625 0.9800631649761128 -1 0.0780563354492187 4 Unmodified _YYLGKILEM_ ENSG00000151746|ENST00000652176|BICD1;nc|ENSG00000151746|Q96G01-3|BICD1;nc|ENSG00000151746|Q96G01-4|BICD1 20.453626601364224 0.2830276176381075 4 YY{I|L}DY{I|L}{I|L} 7 4 42.813 0.0 0.0 3.7935 0.0 0.0 0.0 182.09372888736564 182.09372888736564 23.469616698643023 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.0 0.0 YY{I|L}DY{I|L}{I|L} 3.7935 - 390 + 1 1.48 66127.1 1.0 12956 5059 18013 HBL1_DMSO_200M_050219_2,18017 HBL1_DMSO_200M_050219_2,18017,YYLGKILEM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18018 96.16 199.0 270600.0 25 0 35721.0 -1 LLCCTFQPV 9 69 569.27371308072 1136.53287322824 2 569.7755615115166 MULTI CID FTMS 0 0 0 18013 194187.078125 1.0 0 0.0 5 2 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))C(Carbamidomethyl (C))TFQPV_ ENSG00000101940|ENST00000376729|WDR13;nc|ENSG00000101940|Q9H1Z4-2|WDR13;WDR13|p.A422Gfs*8|1|0.79|ENSG00000101940|chrX:48604376-48604377|-/G|frameshift_variant 13.50788311687929 0.4710407108020397 4 {I|L}{I|L}{I|L} 3 -1 25.686 0.0 0.0 2.2601 0.0 0.0 0.0 794.2573659863054 794.2573659863054 7.781512503836435 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {I|L}{I|L}{I|L} 2.2601 - 29 1 1.48 45493.3 1.0 12957 5059 18013 HBL1_DMSO_200M_050219_2,18018 HBL1_DMSO_200M_050219_2,18018,LLCCTFQPV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18019 96.164 235.0 324610.0 25 0 23181.0 -1 0 68 641.3183258915934 2561.244197699973 4 641.3194457888603 MULTI CID FTMS 0 0 0 18013 177292.125 0.2688458477592767 7 -0.7212066650390625 6 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 61.873 0.0 0.0 2.4157 0.0 0.0 0.0 1619.697037905465 1619.697037905465 47.18047529268127 0.0 0.0 0.0 0 1.5 1.3010299956639813 0.3252574989159953 0.0 [H{I|L}]VEA{I|L}Y{I|L} 2.4157 - 131 1 1.48 69753.4 1.0 12958 5059 18013 HBL1_DMSO_200M_050219_2,18019 HBL1_DMSO_200M_050219_2,18019, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18020 96.172 452.0 258950.0 25 0 32287.0 + 10210 FQIIQSIRMGM 11 90 662.3484565003733 1322.6823600675466 2 662.3500854372978 MULTI CID FTMS 0 0 0 18013 159042.625 0.4128028011156315 2 -0.2161865234375 7 Unmodified _FQIIQSIRMGM_ ENSG00000120742|ENST00000239944|SERP1;ENSG00000151778|ENST00000379179|SERP2 47.7319792270244 0.130190323903946 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}QS{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 11 3 + 67.255 0.0 0.0 5.0847 5.0847 75.881 0.0 0.0 0.0 0.0 0.0 0.0 4.24742501084004 0 0.5 0.7958800173440752 0.3494850021680094 1.1549471895720984 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}QS{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}SQ{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[Q{I|L}]{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}SQ{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}S[AG]{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}QS{[MS]|[{M(Oxidation (M))|F}A]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}S[AG]{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[Q{I|L}]{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}S[AG]{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[VP][C(Carbamidomethyl (C))H]{I|L}SQ{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}Q{[CP]|[EA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}C(Carbamidomethyl (C)){[MG]|[TS]}[RV]S{I|L} 5.0847;4.7636;4.4211;4.3946;4.0991;4.0735;3.731;3.4931;3.2565;3.2435 -;-;-;-;-;-;-;-;-;- 262 + 1 1.48 87488.0 1.0 12959 5059 18013 HBL1_DMSO_200M_050219_2,18020 HBL1_DMSO_200M_050219_2,18020,FQIIQSIRMGM False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18021 96.182 528.0 266960.0 25 0 21081.0 + 1930 AMIELVERL 9 161 537.3047640918295 1072.594975250459 2 537.3069335818291 MULTI CID FTMS 0 0 0 18013 139735.53125 0.0754271674280673 7 -0.7212066650390625 8 Unmodified _AMIELVERL_ ENSG00000166326|ENST00000299413|TRIM44 51.629811660486645 0.0367964933207742 4 M{I|L}AE{I|L}VER{I|L} 9 2 + 98.999 0.0 0.0 9.2299 9.2299 94.988 0.0 0.0 0.0 77.62553968976347 14.4812969097282 14.4812969097282 10.537275116073346 0 1.0941876774005248 2.0 0.6109243748081782 0.3054621874040891 M{I|L}AE{I|L}VER{I|L};MA{I|L}E{I|L}VER{I|L};M{I|L}{I|L}EAVER{I|L};M{I|L}AE{I|L}V[W{I|L}]V;M{I|L}{I|L}EAV[W{I|L}]V;MA{I|L}E{I|L}V[W{I|L}]V;M{I|L}A[{I|L}T]AVQQV;M{I|L}A[VS]VVQQV;M{I|L}{I|L}SGVVQQV;M{I|L}A[{I|L}T]V{[ET]|[MV]}PV 9.2299;8.2475;8.1039;7.5145;6.6323;6.5321;4.2933;4.2933;4.1875;4.1291 -;-;-;-;-;-;-;-;-;- 3204 + 1 1.48 111160.6 1.0 12960 5059 18013 HBL1_DMSO_200M_050219_2,18021 HBL1_DMSO_200M_050219_2,18021,AMIELVERL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18022 96.195 800.0 269840.0 25 0 27066.0 -1 0 120 1186.556913808899 2371.099274684598 2 1187.053759753704 MULTI CID FTMS 0 0 0 18013 123264.59375 0.6024001827756548 3 -0.3147430419921875 9 4 [QP][QT]PPPPA 9 -1 58.267 0.0 0.0 2.4574 0.0 0.0 0.0 1454.611395616492 1454.611395616492 7.86828650810687 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.8283409326844268 1.579689690656103 [QP][QT]PPPPA 2.4574 - 18011 1 1.48 129753.2 0.6200000047683716 12961 5059 18013 HBL1_DMSO_200M_050219_2,18022 HBL1_DMSO_200M_050219_2,18022, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18023 96.206 584.0 193010.0 25 0 17408.0 + 23278 LSWNKTVEL 9 138 545.3008506461704 1088.5871483591409 2 545.3018676638603 MULTI CID FTMS 0 0 0 18013 119320.359375 0.1861288222994355 5 -0.4740676879882812 10 Unmodified _LSWNKTVEL_ ENSG00000196358|ENST00000393229|NTNG2;nc|ENSG00000196358|Q96CW9-2|NTNG2 32.78568957990786 0.1150597335874693 4 {NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TVE{I|L} 9 3 + 60.824 0.0 0.0 5.5875 5.5875 71.798 0.0 0.0 0.0 0.7951583374069031 16.478174818886373 0.7951583374069031 0.7951583374069031 0 0.7742275032520141 1.3979400086720375 0.5 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TD{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TD{I|L}{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}{M(Oxidation (M))|F}PVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}P[R{M(Oxidation (M))|F}]TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}P{[VA]|[{I|L}G]}HPVE{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}{M(Oxidation (M))|F}PD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}P[R{M(Oxidation (M))|F}]TD{I|L}{I|L};[{I|L}P]D[R{M(Oxidation (M))|F}]TVE{I|L} 5.5875;5.5144;4.9705;4.8974;4.8132;4.8111;4.3051;4.1962;4.1941;4.0695 -;-;-;-;-;-;-;-;-;- 1342 1 1.48 93765.3 1.0 12962 5059 18013 HBL1_DMSO_200M_050219_2,18023 HBL1_DMSO_200M_050219_2,18023,LSWNKTVEL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18024 96.215 513.0 168000.0 25 0 39256.0 + -1 IHLMKEHK 8 94 351.194903725232 0 351.1949645876884 PEAK CID FTMS 0 0 0 18013 119127.90625 1.0 0 0.0 11 Oxidation (M) _IHLM(Oxidation (M))KEHK_ REV__L1PB1_dup10052|chr12:47254957-47257203:+|1.548341044108226|0.3758641288713036|2.04|48.0|64|3|sense 4.3292370932331545 0.5842320662952245 4 {I|L}V 2 -1 7.0783 0.0 0.0 1.0107 0.0 0.0 87.94127477495404 397.25840173892817 485.1996765138822 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 1.0107 - 28 + 1 1.48 72563.5 1.0 12963 5059 18013 HBL1_DMSO_200M_050219_2,18024 HBL1_DMSO_200M_050219_2,18024,IHLMKEHK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18025 96.226 679.0 130380.0 25 0 10779.0 40918 VLSPFSLDL 9 110 495.7773613949848 989.5401698567696 2 495.7777282595634 MULTI CID FTMS 0 0 0 18013 115025.765625 1.0 0 0.0 12 Unmodified _VLSPFSLDL_ CON__ENSEMBL:ENSBTAP00000007350 23.1484247019978 0.2366544122328345 4 [VS]P{I|L}E{I|L}[YG]{I|L} 9 5 + 49.944 0.0 0.0 5.0471 5.0471 71.569 0.0 0.0 0.0 17.869704042775034 3.9178196061917694 3.9178196061917694 1.8839576472322648 0 0.3807196863200844 2.0 0.3494850021680094 0.0 [VS]P{I|L}E{I|L}[YG]{I|L};[VS]{I|L}PE{I|L}[YG]{I|L};[VS]P{I|L}E{I|L}{M(Oxidation (M))|F}[VS];[VS]P{I|L}[YT]TP{I|L};[VS]{I|L}PE{I|L}{M(Oxidation (M))|F}[VS];[VS]{I|L}P[YT]TP{I|L};[VS]P{I|L}{M(Oxidation (M))|F}E{I|L}[VS];[VS]P{I|L}[YT]T{I|L}P;[VS]{I|L}P{M(Oxidation (M))|F}E{I|L}[VS];[VS]{I|L}P[YT]T{I|L}P 5.0471;4.8568;4.5574;4.5342;4.3671;4.3438;3.6028;3.5385;3.4124;3.3481 -;-;-;-;-;-;-;-;-;- 412 + 1 1.48 71332.8 1.0 12964 5059 18013 HBL1_DMSO_200M_050219_2,18025 HBL1_DMSO_200M_050219_2,18025,VLSPFSLDL False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 18026 96.231 180.0 326790.0 25 0 31384.0 + 1855 ALVESLITV 9 90 472.7868945131198 943.5592360930395 2 472.7867919802666 MULTI CID FTMS 0 0 0 18013 101695.1953125 0.2561679536413597 -2 0.149566650390625 13 Unmodified _ALVESLITV_ ENSG00000196233|ENST00000421806|LCOR 53.57557251787612 0.0325303259649373 4 [{I|L}A]VTD{I|L} 6 5 37.725 0.0 0.0 3.9982 0.0 0.0 0.0 328.1882393491522 328.1882393491522 11.879165495209278 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.424742501084005 0.0 [{I|L}A]VTD{I|L} 3.9982 - 634 1 1.48 50215.4 1.0 12965 5059 18013 HBL1_DMSO_200M_050219_2,18026 HBL1_DMSO_200M_050219_2,18026,ALVESLITV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18027 96.239 420.0 249570.0 25 0 34746.0 + 34395 SLVASVLVTL 10 124 501.3161937064287 1000.6178344796574 2 501.3162109255791 MULTI CID FTMS 0 0 0 18013 85080.2265625 0.9310366790323066 1 -0.122344970703125 14 Unmodified _SLVASVLVTL_ REV__ENSG00000205639|ENST00000338315|MFSD2B 34.40172386719151 0.2166836008404837 4 {[VA]|[{I|L}G]}MR{I|L}VS{I|L}{I|L} 9 -1 + 27.59 0.0 0.0 2.7573 2.7573 60.746 0.0 0.0 0.0 0.0193449977719843 3.0102999566398125 0.0193449977719843 0.0193449977719843 0 0.0 1.5228787452803376 0.0 0.0 {[VA]|[{I|L}G]}MR{I|L}VS{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}KVTVS{I|L}{I|L};[{I|L}T]AA{I|L}TVS{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}KS{I|L}VS{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GR{I|L}VS{I|L}{I|L};{[VA]|[{I|L}G]}MRV{I|L}S{I|L}{I|L};{[VA]|[{I|L}G]}MR{I|L}V[KG]K;{[QN]|[E{I|L}]|[KN]}KVS{I|L}S{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}KVTV[KG]K;[{I|L}T]AAT{I|L}VS{I|L}{I|L} 2.7573;2.7554;2.6498;2.5514;2.5356;2.4564;2.4564;2.4545;2.4545;2.4458 -;-;-;-;-;-;-;-;-;- 2426 1 1.48 83023.0 1.0 12966 5059 18013 HBL1_DMSO_200M_050219_2,18027 HBL1_DMSO_200M_050219_2,18027,SLVASVLVTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18028 96.253 800.0 145040.0 25 0 15706.0 + 41765 VPVEILNI 8 100 896.5446613172098 895.5373848506098 1 896.5431396365166 MULTI CID FTMS 0 0 0 18013 95008.8125 0.9134264691545114 1 -0.122344970703125 15 Unmodified _VPVEILNI_ ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-3|SBNO1 96.28474662873226 0.07713372045102 4 [VP]EV{I|L}{I|L}N{I|L} 8 2 + 78.3 0.0 0.0 8.7433 8.7433 82.08 0.0 0.0 0.0 17.825834421237516 13.399480616943508 13.399480616943508 1.5186375580366729 0 1.055462187404089 1.6989700043360187 0.2742275032520141 0.2887254899964357 [VP]EV{I|L}{I|L}N{I|L};[VP]VE{I|L}{I|L}N{I|L};[VP]E{I|L}V{I|L}N{I|L};[VP]EV{I|L}QV{I|L};[VP]{I|L}D{I|L}{I|L}N{I|L};[VP]VE{I|L}QV{I|L};[VP]EV{I|L}{I|L}GG{I|L};[VP]E{I|L}VQV{I|L};[VP]VE{I|L}{I|L}GG{I|L};[VP]{I|L}EV{I|L}N{I|L} 8.7433;8.5737;8.0661;7.9191;7.7996;7.7496;7.3867;7.2419;7.2171;7.1224 -;+;-;-;-;-;-;-;-;- + 1247 1 1.48 80090.6 0.4300000071525574 12967 5059 18013 HBL1_DMSO_200M_050219_2,18028 HBL1_DMSO_200M_050219_2,18028,VPVEILNI True True VPVEILNI 96.252723 896.543139636517 983273.4375 18013.0 nc|ENSG00000139697|A3KN83-3|SBNO1;;ENSG00000139697|ENST00000602398|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1 4.61434539159139 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18029 96.267 800.0 105300.0 25 0 5317.2 -1 0 75 804.0224083975139 2409.0453957927416 3 804.3564941287041 MULTI CID FTMS 0 0 0 18013 85679.7890625 1.0 0 0.0 16 4 N{[MG]|[TS]}AVG[WD] 8 -1 45.763 0.0 0.0 1.8996 0.0 0.0 1560.714051725439 0.0 1560.714051725439 0.0 27.43501263708417 0.0 0.0 0 0.3807196863200844 0.0 0.0 1.6549471895720984 N{[MG]|[TS]}AVG[WD] 1.8996 - 295 1 1.48 65826.5 0.4199999868869781 12968 5059 18013 HBL1_DMSO_200M_050219_2,18029 HBL1_DMSO_200M_050219_2,18029, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18031 96.271 11.0 5163900.0 25 0 720630.0 + 10628 FVNDIFERI 9 68 576.8058378406351 1151.5971227480702 2 576.8066284060478 MULTI CID FTMS 0 0 0 18030 3680026.0 0.1693531500889972 3 -0.2576675415039062 1 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 38.61474834105838 0.0830609365873449 4 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}E[R{I|L}] 9 0 + 68.153 0.0 0.0 5.9182 5.9182 56.363 0.0 0.0 0.0 7.786596949921218 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.805462187404089 + + {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}E[R{I|L}];{M(Oxidation (M))|F}VND{I|L}{I|L}{M(Oxidation (M))|F}{[RE]|[WV]};{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}{I|L}{[RE]|[WV]};{M(Oxidation (M))|F}VN{I|L}D{I|L}{M(Oxidation (M))|F}{[RE]|[WV]};{M(Oxidation (M))|F}VN{I|L}D{M(Oxidation (M))|F}E[R{I|L}];{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}E[R{I|L}];{M(Oxidation (M))|F}VGGD{I|L}{I|L}{M(Oxidation (M))|F}{[RE]|[WV]};{M(Oxidation (M))|F}V{I|L}ND{I|L}{M(Oxidation (M))|F}{[RE]|[WV]};{M(Oxidation (M))|F}V{I|L}ND{M(Oxidation (M))|F}E[R{I|L}];{M(Oxidation (M))|F}VN{I|L}D{M(Oxidation (M))|F}{I|L}{[RE]|[WV]} 5.9182;5.9182;5.6568;5.2879;5.2879;5.1186;5.1186;5.0265;5.0265;5.0265 +;-;-;-;-;-;-;-;-;- + 462 + 1 1.484 45597.2 1.0 12969 5060 18030 HBL1_DMSO_200M_050219_2,18031 HBL1_DMSO_200M_050219_2,18031,FVNDIFERI True True FVNDIFERI 96.271254 576.806628406048 892135440.0 18030.0 ENSG00000277224|ENST00000356530|H2BC7;;ENSG00000274641|ENST00000616182|H2BC17;;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;;ENSG00000273802|ENST00000541790|H2BC8;;ENSG00000274290|ENST00000614097|H2BC6;;nc|ENSG00000203814|Q5QNW6-2|H2BC18;;ENSG00000203814|ENST00000369167|H2BC18;;ENSG00000233822|ENST00000612898|H2BC15;;ENSG00000276410|ENST00000615966|H2BC3;;ENSG00000124635|ENST00000339812|H2BC11;;ENSG00000234289|ENST00000599962|H2BC12L;;ENSG00000275713|ENST00000619466|H2BC9;;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;;ENSG00000196890|ENST00000693095|H2BC26;;ENSG00000158373|ENST00000377777|H2BC5;;ENSG00000273703|ENST00000621112|H2BC14;;ENSG00000278588|ENST00000377733|H2BC10;;ENSG00000180596|ENST00000396984|H2BC4;;ENSG00000197903|ENST00000356950|H2BC12;;ENSG00000185130|ENST00000377401|H2BC13;;ENSG00000184678|ENST00000369155|H2BC21 5.382040500640869 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18032 96.273 80.0 902140.0 25 0 101010.0 + 43325 IWPEKVLDI 9 79 556.8206178231145 1111.626682713029 2 556.8207275271416 MULTI CID FTMS 0 0 0 18030 665687.0625 1.0 0 0.0 2 Unmodified _WLLSGLPDVL_ ENSG00000135108|ENST00000622495|FBXO21 26.88365393820708 0.3646707531412818 4 [EP]KV{I|L}D{I|L}[W{I|L}] 9 8 + 49.319 0.0 0.0 4.4367 4.4367 78.048 0.0 0.0 0.0 5.4330502818412185 37.10077508221467 5.4330502818412185 9.018637558036673 0 0.0 1.0969100130080565 0.4247425010840047 0.0 [EP]KV{I|L}D{I|L}[W{I|L}];[EP]K{I|L}VD{I|L}[W{I|L}];[W{I|L}]PE[K{I|L}]VD{I|L};{[TV]|[{I|L}S]}[PG]V{I|L}D{I|L}[W{I|L}];[TP][VG]V{I|L}D{I|L}[W{I|L}];{[TV]|[{I|L}S]}[PG]{I|L}VD{I|L}[W{I|L}];[TP][VG]{I|L}VD{I|L}[W{I|L}] 4.4367;3.6254;3.4297;2.9894;2.2384;2.1781;1.4271 -;-;-;-;-;-;- 195 1 1.484 60130.2 1.0 12970 5060 18030 HBL1_DMSO_200M_050219_2,18032 HBL1_DMSO_200M_050219_2,18032,WLLSGLPDVL False False IWPEKVLDI 96.273094 556.820727527142 12588228.0 18030.0 ENSG00000135108|ENST00000622495|FBXO21 3.372413357098897 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18033 96.276 130.0 345580.0 25 0 27998.0 + -1 CWPLRLLSV 9 85 572.3230653247996 1142.631577716399 2 572.3237792849541 MULTI CID FTMS 0 0 0 18030 243559.3125 0.1276384861307522 12 -1.446929931640625 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))WPLRLLSV_ REV__ENST00000245407.7_1_5:131726498-131729479:+|nuORF 11.640296217721598 0.521594087909532 4 {I|L}W 2 -1 25.969 0.0 0.0 2.2727 0.0 0.0 825.4384167704562 0.0 825.4384167704562 0.0 9.638494991635174 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}W 2.2727 - 156 1 1.484 38846.4 1.0 12971 5060 18030 HBL1_DMSO_200M_050219_2,18033 HBL1_DMSO_200M_050219_2,18033,CWPLRLLSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18034 96.281 274.0 344910.0 25 0 49082.0 + 45797 YYLPKLLSY 9 97 580.3232123016824 1158.6318716701646 2 580.3237792849541 MULTI CID FTMS 0 0 0 18030 238904.015625 0.4458597814152707 3 -0.2576675415039062 4 Unmodified _YYLPKLLSY_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;nc|ENSG00000115970|Q6YHU6-2|THADA;nc|ENSG00000115970|Q6YHU6-3|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA;nc|ENSG00000115970|Q6YHU6-6|THADA 42.312485326615175 0.0627620958981271 4 YY{I|L}PK{I|L}{I|L}SY 9 0 + 72.105 0.0 0.0 6.2233 6.2233 92.114 0.0 0.0 0.0 50.730231979947646 10.400538380459352 10.400538380459352 72.1054072324359 0 0.7429928190999391 2.0 0.805462187404089 0.0 + + YY{I|L}PK{I|L}{I|L}SY 6.2233 + + 462 + 1 1.484 74833.5 1.0 12972 5060 18030 HBL1_DMSO_200M_050219_2,18034 HBL1_DMSO_200M_050219_2,18034,YYLPKLLSY True True YYLPKLLSY 96.280821 580.3241 10439341.0 18030.0 ENSG00000115970|ENST00000405975|THADA;;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;;nc|ENSG00000115970|Q6YHU6-2|THADA;;nc|ENSG00000115970|Q6YHU6-6|THADA;;nc|ENSG00000115970|Q6YHU6-5|THADA;;nc|ENSG00000115970|Q6YHU6-3|THADA 6.543591976165772 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18035 96.284 177.0 314460.0 25 0 51597.0 + 43928 YGIENEVFL 9 96 542.2716229698215 1082.5286930064428 2 542.2718383669853 MULTI CID FTMS 0 0 0 18030 235779.6875 0.3883466411781933 -2 0.2004013061523437 5 Unmodified _YGIENEVFL_ ENSG00000111716|ENST00000350669|LDHB;ENST00000542765.4_1_12:21788478-21790169:-|nuORF 30.63653989081413 0.1413794767160703 4 VDENEV{M(Oxidation (M))|F}{I|L} 8 3 25.786 0.0 0.0 2.3821 0.0 0.0 119.0739994733414 0.0 119.0739994733414 0.0 10.301850288175558 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.3252574989159953 VDENEV{M(Oxidation (M))|F}{I|L} 2.3821 - 186 1 1.484 49769.7 1.0 12973 5060 18030 HBL1_DMSO_200M_050219_2,18035 HBL1_DMSO_200M_050219_2,18035,YGIENEVFL False True YGIENEVFL 96.284262 542.271838366985 5045654.0 18030.0 ENSG00000111716|ENST00000350669|LDHB;;ENST00000542765.4_1_12:21788478-21790169:-|nuORF 3.2658658027648926 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18036 96.292 452.0 253430.0 25 0 42836.0 + + 19799 GLLEKLTAI 9 118 479.3024993838877 956.5904458345756 2 479.3024169802666 MULTI CID FTMS 0 0 0 18030 200773.546875 1.0 0 0.0 6 Unmodified _LGSTLAIVIA_ ENSG00000141384|ENST00000269142|TAF4B 61.357469665136826 0.0330252915653943 4 {[VA]|[{I|L}G]}{I|L}S{I|L}TAVA{I|L} 10 -1 + 80.232 0.0 0.0 8.3873 8.3873 82.853 0.0 0.0 0.0 14.530162782510487 14.146518864155126 14.146518864155126 2.13947206282738 0 1.7302046884880935 2.0 1.0356668758921828 0.0 {[VA]|[{I|L}G]}{I|L}S{I|L}TAVA{I|L};{[VA]|[{I|L}G]}{I|L}STA{I|L}VA{I|L};{[VA]|[{I|L}G]}S{I|L}{I|L}TAVA{I|L};{[VA]|[{I|L}G]}{I|L}ST{I|L}AVA{I|L};{[VA]|[{I|L}G]}S{I|L}TA{I|L}VA{I|L};{[VA]|[{I|L}G]}S{I|L}T{I|L}AVA{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}TAVA{I|L};{[QN]|[E{I|L}]|[KN]}KTA{I|L}VA{I|L};{[QN]|[E{I|L}]|[KN]}KT{I|L}AVA{I|L};[{I|L}A]VS{I|L}TAVA{I|L} 8.3873;8.1636;8.1572;8.0744;7.9335;7.8443;6.8683;6.6447;6.5554;6.4032 -;-;-;-;-;-;-;-;-;- 1572 1 1.484 95649.9 1.0 12974 5060 18030 HBL1_DMSO_200M_050219_2,18036 HBL1_DMSO_200M_050219_2,18036,LGSTLAIVIA False False GLLEKLTAI 96.292271 479.302416980267 1681531.875 18030.0 ENSG00000141384|ENST00000269142|TAF4B 3.7489680449167886 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18037 96.297 252.0 375090.0 25 0 51363.0 + 33473 SIGVEHEEE 9 123 514.7295151303389 1027.4444773274777 2 514.7308227419853 MULTI CID FTMS 0 0 0 18030 163467.171875 0.940195544947074 1 -0.093841552734375 7 Unmodified _SIGVEHEEE_ REV__ENST00000376398.6_1_20:26054468-26063613:+|nuORF;REV__nc|ENSG00000125804|Q5T1J6|FAM182A 11.640296217721598 0.521594087909532 4 {[VA]|[{I|L}G]}SV{I|L}{I|L}{M(Oxidation (M))|F}{I|L} 8 -1 39.963 0.0 0.0 3.8895 0.0 0.0 0.0 181.9077090992152 181.9077090992152 13.961076257560606 0.0 0.0 0.0 0 0.0 2.0 1.392159058960253 0.0 {[VA]|[{I|L}G]}SV{I|L}{I|L}{M(Oxidation (M))|F}{I|L} 3.8895 - 2111 1 1.484 75537.1 1.0 12975 5060 18030 HBL1_DMSO_200M_050219_2,18037 HBL1_DMSO_200M_050219_2,18037,SIGVEHEEE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18038 96.311 800.0 163380.0 25 0 14910.0 + 12467 GVAESIHLWEV 11 149 620.322107654917 1238.629662376634 2 620.3222534060478 MULTI CID FTMS 0 0 0 18030 141126.296875 0.0712185549944754 5 -0.4726409912109375 8 Unmodified _GVAESIHLWEV_ ENSG00000065268|ENST00000585809|WDR18 55.50274090549119 0.0873970505193986 4 [H{I|L}]S{I|L}EADAERV 11 9 + 72.344 0.0 0.0 5.8406 5.8406 76.188 0.0 0.0 0.0 5.031988697790453 15.070623213458028 5.031988697790453 2.614393726401687 0 0.0 0.721246399047171 1.5471062485323517 0.0 [H{I|L}]S{I|L}EADAERV;[H{I|L}]SEA{I|L}DAERV;[H{I|L}]SE{I|L}ADAERV;[H{I|L}]S{I|L}EADEARV;[H{I|L}]S{I|L}EADAREV;{[TV]|[{I|L}S]}H{I|L}EADAERV;[H{I|L}]SEA{I|L}DEARV;[H{I|L}]SE{I|L}ADEARV;[H{I|L}]SEA{I|L}DAREV;[H{I|L}]{I|L}SEADAERV 5.8406;5.6296;5.5976;5.578;5.5368;5.4344;5.367;5.335;5.3258;5.3133 -;-;-;-;-;-;-;-;-;- 14160 1 1.484 99780.7 0.5799999833106995 12976 5060 18030 HBL1_DMSO_200M_050219_2,18038 HBL1_DMSO_200M_050219_2,18038,GVAESIHLWEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18039 96.321 575.0 321040.0 25 0 45087.0 + 1732 ALPVSLPQI 9 135 469.2892609698008 936.5639690064016 2 469.2892639040947 MULTI CID FTMS 0 0 0 18030 140865.515625 0.5050491509325832 -3 0.27191162109375 9 Unmodified _ALPVSLPQI_ ENSG00000064703|ENST00000369702|DDX20 23.1484247019978 0.2366544122328345 4 [VP]S{I|L}PQ 6 3 39.517 0.0 0.0 4.2194 0.0 0.0 0.0 312.1893432041091 312.1893432041091 17.147190419328954 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.316901560044258 0.3494850021680094 + [VP]S{I|L}PQ 4.2194 + + 887 1 1.484 143328.1 1.0 12977 5060 18030 HBL1_DMSO_200M_050219_2,18039 HBL1_DMSO_200M_050219_2,18039,ALPVSLPQI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18040 96.331 589.0 358310.0 25 0 48746.0 + 15661 IQLPSEKAIFL 11 124 629.8736097460296 1257.7326665588591 2 629.8743774294853 MULTI CID FTMS 0 0 0 18030 137333.53125 0.1187017101989075 -3 0.27191162109375 10 Unmodified _IQLPSEKAIFL_ ENSG00000034713|ENST00000037243|GABARAPL2 81.9152076656658 0.0062322988290358 4 [Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}GA{I|L}{M(Oxidation (M))|F}{I|L} 12 5 + 92.781 0.0 0.0 7.3769 7.3769 77.892 0.0 0.0 0.0 9.688105454342804 16.611814434466183 9.688105454342804 0.5912145211865578 0 1.274227503252014 1.3979400086720375 1.6976212463643423 0.7302046884880937 [Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}GA{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{I|L}{[CA]|SS}P{I|L}GA{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{I|L}{[CA]|SS}P{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CP]|[EA]}{I|L}A{I|L}GA{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CP]|[EA]}{I|L}A{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CA]|SS}P{I|L}{I|L}GA{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CP]|[EA]}A{I|L}{M(Oxidation (M))|F}{I|L}{I|L}Q{I|L};[{I|L}A]G{[CP]|[EA]}A{I|L}{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CA]|SS}P{I|L}{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L} 7.3769;7.3299;6.8747;6.8277;6.6948;6.6478;6.6415;6.6376;6.6066;6.5945 -;-;-;-;-;-;-;-;-;- 4334 1 1.484 168495.6 1.0 12978 5060 18030 HBL1_DMSO_200M_050219_2,18040 HBL1_DMSO_200M_050219_2,18040,IQLPSEKAIFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18041 96.345 800.0 145130.0 25 0 10281.0 + 9402 FIYPSNMQTML 11 143 672.8193090405742 1343.6240651479484 2 672.8203002810478 MULTI CID FTMS 0 0 0 18030 100391.109375 0.8257876626761714 -1 0.122344970703125 11 Unmodified _FIYPSNMQTML_ ENSG00000108256|ENST00000225388|NUFIP2 55.50274090549119 0.0873970505193986 4 [PS]NMQTYVY{[QN]|[E{I|L}]|[KN]} 11 7 + 59.848 0.0 0.0 4.4542 4.4542 77.862 0.0 0.0 0.0 4.859955490592647 29.83929004507789 4.859955490592647 8.622731327798547 0 0.805462187404089 1.154901959985743 1.174742501084005 1.110924374808178 [PS]NMQTYVY{[QN]|[E{I|L}]|[KN]};[PS]NMQYTVY{[QN]|[E{I|L}]|[KN]};[PS]NM[AG]TYVY{[QN]|[E{I|L}]|[KN]};[PS]GGMQTYVY{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}SDDYVY{[QN]|[E{I|L}]|[KN]};[MT]QTMQTVY{[QN]|[E{I|L}]|[KN]};[NP]SMQTYVY{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}TVDDYVY{[QN]|[E{I|L}]|[KN]};[PS]NMYQTVY{[QN]|[E{I|L}]|[KN]};[PS]NMQTY{[QN]|[E{I|L}]|[KN]}[YV] 4.4542;3.8125;3.7748;3.7748;3.7128;3.6385;3.6156;3.4166;3.3358;3.2035 -;-;-;-;-;-;-;-;-;- 3442 1 1.484 91275.5 0.4900000095367431 12979 5060 18030 HBL1_DMSO_200M_050219_2,18041 HBL1_DMSO_200M_050219_2,18041,FIYPSNMQTML True True FIYPSNMQTML 96.345025 672.820300281048 1543472.25 18030.0 ENSG00000108256|ENST00000225388|NUFIP2 4.453366915384929 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18042 96.36 800.0 51103.0 25 0 13947.0 -1 0 66 604.0307734160024 1809.070490848207 3 604.0304443240166 MULTI CID FTMS 0 0 0 18030 92793.34375 1.0 0 0.0 12 4 {I|L} 1 -1 12.218 0.0 0.0 0.6754 0.0 0.0 1677.975487651721 0.0 1677.975487651721 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.6754 - 19 + 1 1.484 40151.4 0.4799999892711639 12980 5060 18030 HBL1_DMSO_200M_050219_2,18042 HBL1_DMSO_200M_050219_2,18042, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18044 96.365 3.1 21390000.0 25 0 2061000.0 + 44571 YPFFRGVTI 9 77 550.300497040935 1098.58644114867 2 550.3014404177666 MULTI CID FTMS 0 0 0 18043 15819126.0 0.7065058852690743 1 -0.0985565185546875 1 Unmodified _YPFFRGVTI_ ENSG00000151465|ENST00000281141|CDC123;ENST00000467016.1_1_10:12238244-12240776:+|nuORF 24.881564428377168 0.2146028316269493 4 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 7 3 60.41 0.0 0.0 5.4989 0.0 0.0 0.0 128.07209192447502 128.07209192447502 24.92082456486208 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.2887254899964357 0.0 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 5.4989 - 148 + 1 1.484 56910.5 1.0 12981 5061 18043 HBL1_DMSO_200M_050219_2,18044 HBL1_DMSO_200M_050219_2,18044,YPFFRGVTI False True YPFFRGVTI 96.365095 550.301440417767 1109092608.0 18043.0 ENST00000467016.1_1_10:12238244-12240776:+|nuORF;;ENSG00000151465|ENST00000281141|CDC123 5.734525362650554 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18045 96.366 7.4 9693600.0 25 0 1528800.0 + 1556 ALLDKLYAL 9 91 510.3104663450216 1018.6063797568432 2 510.3108703494072 MULTI CID FTMS 0 0 0 18043 7653861.0 1.0 0 0.0 2 Unmodified _ALLDKLYAL_ ENSG00000177971|ENST00000403490|IMP3 75.76082778847304 0.0188720312721366 4 [{I|L}A][TA]{I|L}YA{I|L}A{I|L} 10 5 + 82.585 0.0 0.0 8.1077 8.1077 88.226 0.0 0.0 0.0 13.177418734074564 16.53212513775344 13.177418734074564 6.020599913279625 0 0.8807196863200843 2.0 1.1382104921644451 0.0 [{I|L}A][TA]{I|L}YA{I|L}A{I|L};[{I|L}A]{I|L}[TA]YA{I|L}A{I|L};[{I|L}A][TA]Y{I|L}A{I|L}A{I|L};[{I|L}A][TA]{I|L}A{I|L}YA{I|L};[{I|L}A][TA]{I|L}AY{I|L}A{I|L};[{I|L}A]YKD{I|L}{I|L}A{I|L};[{I|L}A][TA]YA{I|L}{I|L}A{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}YA{I|L}A{I|L};[{I|L}A]{I|L}[TA]A{I|L}YA{I|L};[{I|L}A]{I|L}[TA]AY{I|L}A{I|L} 8.1077;7.5166;7.3951;7.2613;7.2331;6.8391;6.8162;6.814;6.6702;6.6421 -;-;-;-;-;-;-;-;-;- 921 1 1.484 59317.7 1.0 12982 5061 18043 HBL1_DMSO_200M_050219_2,18045 HBL1_DMSO_200M_050219_2,18045,ALLDKLYAL True True ALLDKLYAL 96.366274 510.310870349407 126745304.0 18043.0 ENSG00000177971|ENST00000403490|IMP3 4.549674987792969 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18046 96.367 23.0 3286700.0 25 0 543560.0 + 41472 VPLPRLLEV 9 62 518.3312528781033 1034.6479528230066 2 518.3319579958916 MULTI CID FTMS 0 0 0 18043 2589734.25 0.9095334062615158 -1 0.093841552734375 3 Unmodified _VPLPRLLEV_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 38.17557092003332 0.0854718145212029 4 VP{I|L}V{M(Oxidation (M))|F} 5 6 56.983 0.0 0.0 5.5074 0.0 0.0 0.0 476.29795252017817 476.29795252017817 38.00312209084183 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 0.0 0.0 VP{I|L}V{M(Oxidation (M))|F} 5.5074 - 184 + 1 1.484 69162.0 1.0 12983 5061 18043 HBL1_DMSO_200M_050219_2,18046 HBL1_DMSO_200M_050219_2,18046,VPLPRLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18047 96.372 254.0 629220.0 25 0 33146.0 -1 0 106 791.3727088192045 2371.096297057813 3 791.7081176638603 MULTI CID FTMS 0 0 0 18043 317326.90625 0.6530943393556694 -1 0.093841552734375 4 4 {[HG]|PP}APPGDCP{I|L}MGM 13 -1 46.396 0.0 0.0 1.9567 0.0 0.0 0.0 1104.545854069975 1104.545854069975 7.734414019959729 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.0994850021680094 0.0 {[HG]|PP}APPGDCP{I|L}MGM 1.9567 - 16369 1 1.484 115980.7 1.0 12984 5061 18043 HBL1_DMSO_200M_050219_2,18047 HBL1_DMSO_200M_050219_2,18047, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18048 96.375 145.0 320490.0 25 0 30705.0 -1 NALAIAVMNM 10 86 532.2672729996981 1062.519993066196 2 532.2676269412041 MULTI CID FTMS 0 0 0 18043 226107.828125 0.6237284189180266 1 -0.0985565185546875 5 Oxidation (M) _NALAIAVM(Oxidation (M))NM_ ENSG00000139549|ENST00000649637|DHH 29.081581746732265 0.3152867722954398 4 {[QG]|[NA]}{I|L}A{I|L} 5 -1 48.5 0.0 0.0 4.5646 0.0 0.0 0.0 577.2107639004336 577.2107639004336 26.58870936703728 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.6505149978319906 {[QG]|[NA]}{I|L}A{I|L} 4.5646 + + 210 1 1.484 40996.4 1.0 12985 5061 18043 HBL1_DMSO_200M_050219_2,18048 HBL1_DMSO_200M_050219_2,18048,NALAIAVMNM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18049 96.378 147.0 336070.0 25 0 70094.0 -1 FLWCVFFV 8 82 559.2819305176805 1116.549308102161 2 559.2819702029228 MULTI CID FTMS 0 0 0 18043 212345.75 0.4199368697761766 3 -0.2578811645507812 6 Carbamidomethyl (C) _FLWC(Carbamidomethyl (C))VFFV_ ENST00000434693.6_1_3:29322867-29323038:+|nuORF 17.086550045450526 0.6584923310065985 4 E{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V 5 -1 40.49 0.0 0.0 3.6263 0.0 0.0 429.2233753888688 0.0 429.2233753888688 0.0 24.06295947543775 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 E{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V 3.6263 - 416 1 1.484 45996.2 1.0 12986 5061 18043 HBL1_DMSO_200M_050219_2,18049 HBL1_DMSO_200M_050219_2,18049,FLWCVFFV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18050 96.384 345.0 188470.0 25 0 18989.0 -1 SVRVCWSL 8 96 503.7602067126394 1005.5058604920788 2 503.7603942751884 MULTI CID FTMS 0 0 0 18043 166170.25 0.4327346738812875 2 -0.1638259887695312 7 Carbamidomethyl (C) _SVRVC(Carbamidomethyl (C))WSL_ ENSG00000186628|ENST00000334574|FSD2;nc|ENSG00000186628|A1L4K1-2|FSD2 18.13498045792455 0.6430038125133779 4 {I|L}T 2 -1 19.464 0.0 0.0 1.9357 0.0 0.0 0.0 788.3508507942166 788.3508507942166 5.969100130080562 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}T 1.9357 - 256 + 1 1.484 55208.1 1.0 12987 5061 18043 HBL1_DMSO_200M_050219_2,18050 HBL1_DMSO_200M_050219_2,18050,SVRVCWSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18051 96.39 298.0 238320.0 25 0 26507.0 + 2906 AVFPDDMPTL 10 103 553.2651345710362 1104.5157162088724 2 553.2644531130791 MULTI CID FTMS 0 0 0 18043 143237.265625 0.129561366950977 10 -1.2379608154296875 8 Unmodified _AVFPDDMPTL_ ENSG00000118058|ENST00000534358|KMT2A;nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A 34.10243960390752 0.2198439752719791 4 [TP]{I|L} 3 7 21.985 0.0 0.0 1.9905 0.0 0.0 0.0 790.3082734892952 790.3082734892952 0.7747579965704965 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.1694451763165201 0.0 + [TP]{I|L} 1.9905 + + 137 1 1.484 62796.1 1.0 12988 5061 18043 HBL1_DMSO_200M_050219_2,18051 HBL1_DMSO_200M_050219_2,18051,AVFPDDMPTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18052 96.404 800.0 128720.0 25 0 8887.8 -1 0 101 771.36593400313 3081.43463014612 4 771.8688232302666 MULTI CID FTMS 0 0 0 18043 138330.875 0.1410626861638308 9 -1.0827560424804688 9 4 [H{I|L}]VE[{I|L}A]Y{I|L}V 9 -1 54.548 0.0 0.0 1.7702 0.0 0.0 0.0 2040.8276730666475 2040.8276730666475 38.082137524178 0.0 0.0 0.0 0 1.274227503252014 1.5228787452803376 0.5484550065040282 0.0 [H{I|L}]VE[{I|L}A]Y{I|L}V 1.7702 - 481 1 1.484 80425.7 0.5699999928474426 12989 5061 18043 HBL1_DMSO_200M_050219_2,18052 HBL1_DMSO_200M_050219_2,18052, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18053 96.417 800.0 255660.0 25 0 45736.0 + 1521 ALIPDLNQI 9 165 498.79044270249847 995.566332471797 2 498.7903015017509 MULTI CID FTMS 0 0 0 18043 135627.4375 0.7629290640777703 -1 0.093841552734375 10 Unmodified _ALIPDLNQI_ ENSG00000134709|ENST00000371208|HOOK1;ENST00000465876.5_1_1:60281005-60331594:+|nuORF;nc|ENSG00000134709|Q9UJC3-2|HOOK1 67.34385681178166 0.0221257235307089 4 [{I|L}A]GNT{I|L}E 7 6 45.711 0.0 0.0 4.5914 0.0 0.0 0.0 294.18239890746105 294.18239890746105 -0.5542174236082786 0.0 -0.5542174236082786 0.0 0 0.4247425010840047 1.6989700043360187 0.3494850021680094 1.305462187404089 [{I|L}A]GNT{I|L}E 4.5914 - 2781 1 1.484 157687.5 0.5099999904632568 12990 5061 18043 HBL1_DMSO_200M_050219_2,18053 HBL1_DMSO_200M_050219_2,18053,ALIPDLNQI True True ALIPDLNQI 96.417408 498.790301501751 1618964.75 18043.0 ENST00000465876.5_1_1:60281005-60331594:+|nuORF;;ENSG00000134709|ENST00000371208|HOOK1;;nc|ENSG00000134709|Q9UJC3-2|HOOK1 4.7370297114054365 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18054 96.422 263.0 438330.0 25 0 48053.0 + 20840 LMATFWSSI 9 126 528.2638331847786 1054.5131134363571 2 528.2642089724541 MULTI CID FTMS 0 0 0 18043 115119.59375 0.5131673517461429 -2 0.2161865234375 11 Unmodified _LMATFWSSI_ REV__ENSG00000095209|ENST00000374692|TMEM38B 18.13498045792455 0.3457906370836843 4 {I|L}A 2 -1 30.804 0.0 0.0 2.9211 0.0 0.0 0.0 867.3685900147672 867.3685900147672 10.102792743518876 0.0 0.0 0.0 0 0.1595680409956017 0.8239087409443188 0.0 0.0 {I|L}A 2.9211 - 336 + 1 1.484 95141.3 1.0 12991 5061 18043 HBL1_DMSO_200M_050219_2,18054 HBL1_DMSO_200M_050219_2,18054,LMATFWSSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18055 96.427 236.0 213210.0 25 0 41145.0 + 11831 GLPHLHITI 9 76 500.8021919685546 0 500.8016845583916 PEAK CID FTMS 0 0 0 18043 108768.609375 0.946701720369991 1 -0.0985565185546875 12 Unmodified _GLPHLHITI_ REV__ENST00000374825.8_1_6:32940012-32940111:+|nuORF 23.1484247019978 0.1725298825155634 4 WS 2 -1 13.469 0.0 0.0 1.3475 0.0 0.0 170.11010795879048 553.3471773736936 723.4572853324842 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 WS 1.3475 - 80 + 1 1.484 46852.2 1.0 12992 5061 18043 HBL1_DMSO_200M_050219_2,18055 HBL1_DMSO_200M_050219_2,18055,GLPHLHITI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18056 96.441 737.0 263790.0 25 0 31912.0 + 34139 SLLVKEEPL 9 173 514.304395914395 1026.5942388955898 2 514.3047973513603 MULTI CID FTMS 0 0 0 18043 90533.5 0.841180893386238 -2 0.2161865234375 13 Unmodified _SLLVKEEPL_ REV__ENSG00000216937|ENST00000639629|CCDC7 40.72490554402381 0.0714771638475563 4 {[TV]|[{I|L}S]}{I|L}VG{I|L}S[EP]{I|L} 10 -1 + 59.825 0.0 0.0 5.8276 5.8276 73.373 0.0 0.0 0.0 9.674690354091148 13.679767852945943 9.674690354091148 1.1458941300587782 0 1.2887254899964358 1.6989700043360187 0.8556270500406936 0.0 {[TV]|[{I|L}S]}{I|L}VG{I|L}S[EP]{I|L};{[TV]|[{I|L}S]}GV{I|L}{I|L}S[EP]{I|L};{[TV]|[{I|L}S]}{I|L}VGS{I|L}[EP]{I|L};{[TV]|[{I|L}S]}GV{I|L}S{I|L}[EP]{I|L};{[TV]|[{I|L}S]}{I|L}GV{I|L}S[EP]{I|L};{[TV]|[{I|L}S]}{I|L}VAVS[EP]{I|L};{[TV]|[{I|L}S]}G{I|L}V{I|L}S[EP]{I|L};{[TV]|[{I|L}S]}{I|L}GVS{I|L}[EP]{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}S[EP]{I|L};{[TV]|[{I|L}S]}{I|L}VGSPE{I|L}{I|L} 5.8276;5.7159;5.4914;5.3798;5.3628;5.1314;5.1307;5.0267;4.8851;4.8733 -;-;-;-;-;-;-;-;-;- 9590 1 1.484 151807.5 1.0 12993 5061 18043 HBL1_DMSO_200M_050219_2,18056 HBL1_DMSO_200M_050219_2,18056,SLLVKEEPL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18057 96.454 800.0 237290.0 25 0 20414.0 + 43030 DAYVLPKLYVKL 12 125 711.423564347883 1420.832575762566 2 711.4247314333916 MULTI CID FTMS 0 0 0 18043 89270.4765625 0.6207950025295506 -1 0.093841552734375 14 Unmodified _VYAFKRLFHLK_ nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 27.628801355627647 0.4434699450731472 4 {[DA]|[EG]}YV{I|L}PK{I|L}YVK{I|L} 12 10 + 95.963 0.0 0.0 6.754 6.754 79.229 0.0 0.0 0.0 16.23208470553547 2.340832060333682 2.340832060333682 2.340832060333682 0 3.0994850021680094 1.3010299956639813 0.0 0.2887254899964357 {[DA]|[EG]}YV{I|L}PK{I|L}YVK{I|L};{[DA]|[EG]}YV{I|L}PK{I|L}YV{I|L}K;{[DA]|[EG]}Y{I|L}VPK{I|L}YVK{I|L};{[DA]|[EG]}Y{I|L}VPK{I|L}YV{I|L}K;{[DA]|[EG]}YV{I|L}{I|L}[KP]YVK{I|L};{[DA]|[EG]}YV{I|L}{I|L}[KP]YV{I|L}K;{[DA]|[EG]}Y{I|L}V{I|L}[KP]YVK{I|L};{[DA]|[EG]}Y{I|L}V{I|L}[KP]YV{I|L}K 6.754;6.5892;6.1224;5.9576;5.8109;5.6462;5.1793;5.0145 -;-;-;-;-;-;-;- 1436 + 1 1.484 136797.0 0.4399999976158142 12994 5061 18043 HBL1_DMSO_200M_050219_2,18057 HBL1_DMSO_200M_050219_2,18057,VYAFKRLFHLK False True DAYVLPKLYVKL 96.454488 711.424731433392 1135713.5 18043.0 nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENSG00000197728|ENST00000646449|RPS26;;ENST00000444468.1_1_X:128542382-128542532:+|nuORF 7.88854169845581 2.0 False 12.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18058 96.459 233.0 390050.0 25 0 50470.0 + 1919 AMFENFVSV 9 140 522.2464525782092 1042.4783522232185 2 522.2469360232353 MULTI CID FTMS 0 0 0 18043 80996.1875 0.4902346598222248 -1 0.093841552734375 15 Unmodified _AMFENFVSV_ ENSG00000136937|ENST00000375147|NCBP1;ENST00000478100.3_1_9:100403935-100409818:+|nuORF 48.345845343767074 0.0439967357579942 4 SV 2 7 21.454 0.0 0.0 2.0579 0.0 0.0 838.3669458284902 0.0 838.3669458284902 0.0 -0.9594717286145736 -0.9594717286145736 0.0 0 0.0 0.0 0.3494850021680094 0.0 + SV 2.0579 + + 798 + 1 1.484 79406.4 1.0 12995 5061 18043 HBL1_DMSO_200M_050219_2,18058 HBL1_DMSO_200M_050219_2,18058,AMFENFVSV True True AMFENFVSV 96.458866 522.246936023235 1247033.875 18043.0 ENSG00000136937|ENST00000375147|NCBP1;;ENST00000478100.3_1_9:100403935-100409818:+|nuORF 3.0615075826644897 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18060 96.464 10.0 5009600.0 25 0 1258200.0 + 18671 LAILRLSL 8 53 449.8076860675103 897.6008192018205 2 449.8080322146416 MULTI CID FTMS 0 0 0 18059 5857067.0 1.0 0 0.0 1 Unmodified _LAILRLSL_ ENSG00000075240|ENST00000406902|GRAMD4 58.6788170122104 0.1149141431586871 4 [{I|L}A]{I|L}R{I|L}{I|L}S{I|L} 8 2 + 59.531 0.0 0.0 6.6322 6.6322 93.427 0.0 0.0 0.0 11.030768805449185 30.83281569033012 11.030768805449185 59.53070327321406 0 1.3182503180159344 2.0 0.3494850021680094 0.0 [{I|L}A]{I|L}R{I|L}{I|L}S{I|L} 6.6322 - 24 1 1.485 48461.6 1.0 12996 5062 18059 HBL1_DMSO_200M_050219_2,18060 HBL1_DMSO_200M_050219_2,18060,LAILRLSL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18061 96.466 89.0 684670.0 25 0 62109.0 20913 LMWVRVAP 8 76 486.2768309585354 970.539108983871 2 486.2766296267509 MULTI CID FTMS 0 0 0 18059 346933.84375 0.2311840019151283 6 -0.67657470703125 2 Unmodified _LMWVRVAP_ nc|ENSG00000136487|P01242-2|GH2 20.871210003555333 0.6025813472596342 4 WP{M(Oxidation (M))|F}{I|L} 4 7 38.488 0.0 0.0 3.9656 0.0 0.0 0.0 424.2320513054803 424.2320513054803 14.842509624031235 0.0 0.0 0.0 0 0.6549471895720984 0.0 0.0 0.0 WP{M(Oxidation (M))|F}{I|L} 3.9656 - 115 + 1 1.485 52964.8 1.0 12997 5062 18059 HBL1_DMSO_200M_050219_2,18061 HBL1_DMSO_200M_050219_2,18061,LMWVRVAP False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 18062 96.468 113.0 579840.0 25 0 83624.0 + 17924 KQVEEIFNLKF 11 85 465.5940681935475 1393.7603751808426 3 465.5944091677666 MULTI CID FTMS 0 0 0 18059 486908.75 0.3244147800624415 -2 0.1923980712890625 3 Unmodified _KQVEEIFNLKF_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 65.47368725323818 0.0469305343733202 4 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L} 6 7 56.604 0.0 0.0 4.0612 0.0 0.0 0.0 664.3445924911481 664.3445924911481 20.757659435244733 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.8494850021680094 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L} 4.0612 - 370 1 1.485 62081.1 1.0 12998 5062 18059 HBL1_DMSO_200M_050219_2,18062 HBL1_DMSO_200M_050219_2,18062,KQVEEIFNLKF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18063 96.471 127.0 472420.0 25 0 48238.0 + 21642 LPLESVPTL 9 74 484.7861397785775 967.557726623955 2 484.7871887087822 MULTI CID FTMS 0 0 0 18059 456177.0 0.6037350545458516 2 -0.1593246459960937 4 Unmodified _LPLESVPTL_ REV__ENSG00000164463|ENST00000296953|CREBRF;REV__ENST00000520464.1_1_5:172537514-172550222:+|nuORF;REV__nc|ENSG00000164463|Q8IUR6-3|CREBRF 30.22481116460888 0.1466181017706357 4 {[QN]|[E{I|L}]|[KN]}PPT{I|L}{I|L}W 8 -1 + 47.802 0.0 0.0 4.9405 4.9405 70.171 0.0 0.0 0.0 1.4806253545543768 1.4806253545543768 1.4806253545543768 1.4806253545543768 0 0.0 1.0457574905606752 0.0 0.0 {[QN]|[E{I|L}]|[KN]}PPT{I|L}{I|L}W;[{I|L}P]EPT{I|L}{I|L}[VS];{[QN]|[E{I|L}]|[KN]}P{I|L}[TP]{I|L}W;[{I|L}P]E{I|L}[TP]{I|L}[VS];{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}[HA]PT{I|L};[{I|L}P]T[EP]{I|L}{I|L}[VS];[{I|L}P]T{I|L}[EP]{I|L}[VS];[TP]{I|L}[EP]{I|L}{I|L}[VS];[TP]{I|L}{I|L}[EP]{I|L}[VS];[{I|L}T]P[EP]{I|L}{I|L}[VS] 4.9405;4.7874;3.8068;3.6537;3.2549;3.1606;2.8495;2.3477;2.0366;1.8629 -;-;-;-;-;-;-;-;-;- 202 1 1.485 51636.7 1.0 12999 5062 18059 HBL1_DMSO_200M_050219_2,18063 HBL1_DMSO_200M_050219_2,18063,LPLESVPTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18064 96.474 185.0 349660.0 25 0 64491.0 + 17926 KQVEEIFNLKF 11 83 697.8868557863777 1393.7591586395554 2 697.8881713747978 MULTI CID FTMS 0 0 0 18059 284131.34375 0.2858306246781255 -2 0.1923980712890625 5 Unmodified _KQVEEIFNLKF_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 102.5486954659897 0.0028515859013168 4 [RH]{I|L}N{M(Oxidation (M))|F}{I|L}EEN{I|L} 10 9 91.515 0.0 0.0 6.5661 0.0 0.0 0.0 125.07247339420157 125.07247339420157 64.46440244762421 0.0 0.0 0.0 0 3.3494850021680094 0.0 0.3807196863200844 1.579689690656103 [RH]{I|L}N{M(Oxidation (M))|F}{I|L}EEN{I|L} 6.5661 - 1548 + 1 1.485 54165.4 1.0 13000 5062 18059 HBL1_DMSO_200M_050219_2,18064 HBL1_DMSO_200M_050219_2,18064,KQVEEIFNLKF True True KQVEEIFNLKF 96.474163 697.888171374798 45590484.0 18059.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 7.8041300773620605 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18065 96.481 362.0 415020.0 25 0 21189.0 + 4192 DAPIVAHLWEY 11 134 657.3296219598126 1312.644690986425 2 657.3300659060478 MULTI CID FTMS 0 0 0 18059 259727.90625 0.4339898632397906 -2 0.1923980712890625 6 Unmodified _DAPIVAHLWEY_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 103.82355648334676 0.0046447410502644 4 {[DA]|[EG]}P{I|L}VAH{I|L}WEY 11 0 + 75.077 0.0 0.0 5.7195 5.7195 79.175 0.0 0.0 0.0 2.24579178536149 2.24579178536149 2.24579178536149 4.74579178536149 0 3.341612688240572 1.5228787452803376 0.8252574989159953 0.0 + + {[DA]|[EG]}P{I|L}VAH{I|L}WEY;{[DA]|[EG]}P{I|L}VAH{I|L}EWY;[{I|L}P]VAHW{I|L}EGEY;[{I|L}P]VAH{I|L}WEGEY;[H{I|L}]G{I|L}PW{I|L}EGEY;[H{I|L}]G{I|L}P{I|L}WEGEY;[H{I|L}]AVPW{I|L}EGEY;[H{I|L}]AVP{I|L}WEGEY;[{I|L}P]VADAH{I|L}WEY;[{I|L}P]{[DA]|[EG]}VAH{I|L}WEY 5.7195;5.358;5.1965;5.178;4.9443;4.9259;4.8102;4.7917;4.7013;4.6989 +;-;-;-;-;-;-;-;-;- + 6266 + 1 1.485 111146.7 1.0 13001 5062 18059 HBL1_DMSO_200M_050219_2,18065 HBL1_DMSO_200M_050219_2,18065,DAPIVAHLWEY True True DAPIVAHLWEY 96.480697 657.330065906048 12518735.0 18059.0 nc|ENSG00000110090|P50416-2|CPT1A;;ENSG00000110090|ENST00000265641|CPT1A 8.715947786966959 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18066 96.489 448.0 328670.0 25 0 31148.0 + 9968 FPGLAIKI 8 109 429.77601453505866 857.5374761369173 2 429.7762023806572 MULTI CID FTMS 0 0 0 18059 173293.59375 0.0152762457013585 6 -0.67657470703125 7 Unmodified _FPGLAIKI_ ENSG00000142945|ENST00000372224|KIF2C;ENST00000455186.5_1_1:45205634-45205691:+|nuORF;ENST00000493027.5_1_1:45205556-45221765:+|nuORF 74.39630413441286 0.1057069479668299 4 {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L} 8 0 + 55.757 0.0 0.0 6.502 6.502 82.886 0.0 0.0 0.0 12.5190243216651 5.228787452803374 5.228787452803374 5.228787452803374 0 1.274227503252014 0.0 0.0 0.6462566630072955 + + {M(Oxidation (M))|F}PG{I|L}A{I|L}K{I|L};{M(Oxidation (M))|F}PG{I|L}A{I|L}{I|L}K;{M(Oxidation (M))|F}P[Q{I|L}]{I|L}K{I|L};{M(Oxidation (M))|F}P[Q{I|L}]{I|L}{I|L}K;{M(Oxidation (M))|F}{I|L}[QP]{I|L}K{I|L};{M(Oxidation (M))|F}{I|L}[PG]A{I|L}K{I|L};{M(Oxidation (M))|F}{I|L}[QP]{I|L}{I|L}K;{M(Oxidation (M))|F}{I|L}[PG]A{I|L}{I|L}K;[PG]{I|L}A{M(Oxidation (M))|F}{I|L}K{I|L};[PG]{I|L}A{I|L}{M(Oxidation (M))|F}K{I|L} 6.502;5.8923;5.3218;4.712;4.6792;4.6116;4.0695;4.0018;3.2633;2.9071 +;-;-;-;-;-;-;-;-;- + 192 + 1 1.485 119484.5 1.0 13002 5062 18059 HBL1_DMSO_200M_050219_2,18066 HBL1_DMSO_200M_050219_2,18066,FPGLAIKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18067 96.491 123.0 466510.0 25 0 40617.0 + -1 DLLVKTQCL 9 85 545.3000667161175 1088.585580499035 2 545.3001586794853 MULTI CID FTMS 0 0 0 18059 166210.75 0.5917616230736503 -6 0.5253067016601562 8 Carbamidomethyl (C) _DLLVKTQC(Carbamidomethyl (C))L_ REV__ENSG00000005156|ENST00000378526|LIG3;REV__nc|ENSG00000005156|P49916-3|LIG3 20.453626601364224 0.2830276176381075 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}V{[MG]|[TS]}TVE{I|L} 10 -1 + 54.83 0.0 0.0 5.0368 5.0368 52.643 0.0 0.0 0.0 4.436974992327123 14.146518864155126 4.436974992327123 0.0 0 0.25 1.2218487496163564 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}V{[MG]|[TS]}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[CA]|SS}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[CA]|SS}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}VV{[MG]|[TS]}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[WT]|[RM]}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}{[MG]|[TS]}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{[MG]|[TS]}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[WT]|[RM]}TVE{I|L} 5.0368;5.0368;4.6292;4.6292;4.4367;4.4367;4.3947;4.3947;4.0291;4.0291 -;-;-;-;-;-;-;-;-;- 439 1 1.485 52214.0 1.0 13003 5062 18059 HBL1_DMSO_200M_050219_2,18067 HBL1_DMSO_200M_050219_2,18067,DLLVKTQCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18068 96.505 800.0 359110.0 25 0 32528.0 -1 0 128 1186.556913808899 2371.099274684598 2 1187.061450183392 MULTI CID FTMS 0 0 0 18059 143582.328125 0.7016939582933079 6 -0.67657470703125 9 4 [YK]YPPPPA 8 -1 61.184 0.0 0.0 2.5804 0.0 0.0 0.0 1454.6142032336795 1454.6142032336795 13.11091380926294 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 1.4604093769761874 [YK]YPPPPA 2.5804 - 13632 1 1.485 168299.5 0.550000011920929 13004 5062 18059 HBL1_DMSO_200M_050219_2,18068 HBL1_DMSO_200M_050219_2,18068, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18069 96.51 285.0 245960.0 25 0 20390.0 + 9244 FGYDHLILNV 10 81 595.8141538154719 1189.6137546977436 2 595.8140746951103 MULTI CID FTMS 0 0 0 18059 141772.921875 0.5534813392204825 -1 0.0985565185546875 10 Unmodified _FGYDHLILNV_ ENSG00000130811|ENST00000253108|EIF3G;ENST00000590158.1_1_19:10225792-10226817:-|nuORF 34.40172386719151 0.2166836008404837 4 {I|L}{I|L}{I|L}NV 5 5 40.943 0.0 0.0 3.4417 0.0 0.0 619.2391960459846 0.0 619.2391960459846 0.0 28.179140395192128 0.0 0.0 0 0.75 0.0 0.0 0.0 + {I|L}{I|L}{I|L}NV 3.4417 + + 173 1 1.485 57353.7 1.0 13005 5062 18059 HBL1_DMSO_200M_050219_2,18069 HBL1_DMSO_200M_050219_2,18069,FGYDHLILNV False True FGYDHLILNV 96.510334 595.81407469511 2102438.75 18059.0 ENST00000590158.1_1_19:10225792-10226817:-|nuORF;;ENSG00000130811|ENST00000253108|EIF3G 5.633385022481282 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18070 96.524 800.0 176770.0 25 0 22998.0 + 17198 KLLDLMPRL 9 141 366.8948199079697 1097.6626303241092 3 366.8949157595634 MULTI CID FTMS 0 0 0 18059 110425.2265625 1.0 0 0.0 11 Unmodified _KLLDLMPRL_ ENSG00000149262|ENST00000534064|INTS4 27.22323531849824 0.1848086127304535 4 [K{I|L}]{I|L}D{I|L} 5 4 31.476 0.0 0.0 2.8676 0.0 0.0 0.0 512.2650033593609 512.2650033593609 10.07393098725139 0.0 0.0 0.0 0 0.3807196863200844 1.0969100130080565 0.7302046884880937 0.2742275032520141 + [K{I|L}]{I|L}D{I|L} 2.8676 + + 126 1 1.485 115625.0 0.4099999964237213 13006 5062 18059 HBL1_DMSO_200M_050219_2,18070 HBL1_DMSO_200M_050219_2,18070,KLLDLMPRL False True KLLDLMPRL 96.524149 366.894915759563 1816504.625 18059.0 ENSG00000149262|ENST00000534064|INTS4 3.0698605378468837 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18072 96.533 333.0 220990.0 25 0 19727.0 + 1856 ALVESLITV 9 99 472.7868945131198 943.5592360930395 2 472.7870056033134 MULTI CID FTMS 0 0 0 18071 198726.53125 0.5005877483997603 2 -0.2149734497070312 1 Unmodified _ALVESLITV_ ENSG00000196233|ENST00000421806|LCOR 53.57557251787612 0.0325303259649373 4 [{I|L}A]VTD{I|L} 6 5 39.135 0.0 0.0 4.1476 0.0 0.0 0.0 328.18671347024593 328.18671347024593 9.587199307657883 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.3807196863200843 0.0 [{I|L}A]VTD{I|L} 4.1476 - 1086 1 1.485 63107.5 1.0 13007 5063 18071 HBL1_DMSO_200M_050219_2,18072 HBL1_DMSO_200M_050219_2,18072,ALVESLITV True True ALVESLITV 96.532707 472.787005603313 6398955.0 18071.0 ENSG00000196233|ENST00000421806|LCOR 2.447097579638163 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18073 96.534 58.0 1361800.0 25 0 478050.0 -1 0 65 326.17111147369275 650.3276700141855 2 326.1710388064384 MULTI CID FTMS 0 0 0 18071 685509.6875 0.0884152436431079 -2 0.1638259887695312 2 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.485 71404.4 1.0 13008 5063 18071 HBL1_DMSO_200M_050219_2,18073 HBL1_DMSO_200M_050219_2,18073, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18074 96.537 166.0 527350.0 25 0 63923.0 + 45206 YQVDLLVKI 9 99 545.828898813549 1089.643244693898 2 545.8290283083916 MULTI CID FTMS 0 0 0 18071 261053.78125 0.7111063384640425 -1 0.0652694702148437 3 Unmodified _YQVDLLVKI_ ENSG00000184445|ENST00000333479|KNTC1 38.17557092003332 0.0854718145212029 4 [YQ]VD{I|L}{I|L}VK{I|L} 9 0 [YQ] + + 30.757 9.036 3.1039 2.8226 2.8226 45.578 0.0 0.0 0.0 0.0 19.0741664442561 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.2215141619232908 + + [YQ]VD{I|L}{I|L}VK{I|L} 2.8226 + + 524 + 1 1.485 71335.5 1.0 13009 5063 18071 HBL1_DMSO_200M_050219_2,18074 HBL1_DMSO_200M_050219_2,18074,YQVDLLVKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18075 96.547 555.0 314090.0 25 0 37138.0 -1 0 95 754.3772750827313 753.3699986161313 1 754.3779785037041 MULTI CID FTMS 0 0 0 18071 181324.171875 0.322777064744622 -3 0.2576675415039062 4 4 {[NV]|[RG]}D{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 6 -1 + 55.778 0.0 0.0 7.4039 7.4039 92.211 0.0 0.0 0.0 11.33823530010693 8.010299956639813 8.010299956639813 11.33823530010693 0 0.6307196863200843 0.0 0.5138793319624578 1.1936726795685342 {[NV]|[RG]}D{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[DN]V{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[NV]|[RG]}{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}D]|MM}NV{M(Oxidation (M))|F}{I|L};[DN]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}DNV{I|L};{[{M(Oxidation (M))|F}D]|MM}N{M(Oxidation (M))|F}V{I|L};[DN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{I|L};{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}NV{I|L};[{M(Oxidation (M))|F}V]ND{M(Oxidation (M))|F}{I|L} 7.4039;5.8989;5.3257;5.126;4.8034;4.4025;4.4025;4.0799;4.0029;3.7437 -;-;-;-;-;-;-;-;-;- 649 1 1.485 127379.0 1.0 13010 5063 18071 HBL1_DMSO_200M_050219_2,18075 HBL1_DMSO_200M_050219_2,18075, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18076 96.554 388.0 183740.0 25 0 23828.0 -1 FAMPYFIQV 9 119 566.2784045636248 1130.5422561940495 2 566.2775756716728 MULTI CID FTMS 0 0 0 18071 109102.03125 1.0 0 0.0 5 Oxidation (M) _FAM(Oxidation (M))PYFIQV_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 19.438996006549623 0.310492472477042 4 {[VA]|[{I|L}G]}G[WH]M{M(Oxidation (M))|F}ANV 10 -1 {[VA]|[{I|L}G]}G[WH]M{M(Oxidation (M))|F}AN + + 13.979 8.1258 0.80178 1.2365 1.2365 44.265 0.0 0.0 0.0 0.0 -4.781381439366186 -4.781381439366186 0.0 0 0.0 0.0 0.0 0.0 {[VA]|[{I|L}G]}G[WH]M{M(Oxidation (M))|F}ANV 1.2365 - 447 + 1 1.485 61272.5 1.0 13011 5063 18071 HBL1_DMSO_200M_050219_2,18076 HBL1_DMSO_200M_050219_2,18076,FAMPYFIQV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18077 96.56 321.0 250250.0 25 0 24419.0 + 36357 SYPLFSQEF 9 121 559.2634316867733 1116.5123104403465 2 559.2626830935478 MULTI CID FTMS 0 0 0 18071 106612.5546875 0.7623567551140233 -2 0.1638259887695312 6 Unmodified _SYPLFSQEF_ ENSG00000065308|ENST00000182527|TRAM2 26.88365393820708 0.1891292719743517 4 E{I|L}{I|L}S 4 7 26.855 0.0 0.0 2.4052 0.0 0.0 115.94579540304024 555.3010958307249 671.2468912337652 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.0 E{I|L}{I|L}S 2.4052 - 611 + 1 1.485 66669.2 1.0 13012 5063 18071 HBL1_DMSO_200M_050219_2,18077 HBL1_DMSO_200M_050219_2,18077,SYPLFSQEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18078 96.574 800.0 150000.0 25 0 17608.0 + 1726 ALPQTLPEI 9 146 491.2842508635385 980.553948793877 2 491.2851440310478 MULTI CID FTMS 0 0 0 18071 97206.6875 1.0 0 0.0 7 Unmodified _ALPQTLPEI_ ENSG00000104969|ENST00000221566|SGTA 48.345845343767074 0.0439967357579942 4 [VP]QVS{I|L} 6 6 25.793 0.0 0.0 2.6305 0.0 0.0 0.0 354.1670218742083 354.1670218742083 2.861300909143054 0.0 0.0 0.0 0 0.75 1.0 0.7614393726401688 0.0 [VP]QVS{I|L} 2.6305 - 945 1 1.485 97154.1 0.4399999976158142 13013 5063 18071 HBL1_DMSO_200M_050219_2,18078 HBL1_DMSO_200M_050219_2,18078,ALPQTLPEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18079 96.588 800.0 121930.0 25 0 14530.0 + 27300 PHLLLPAL 8 122 437.28103129354673 872.5475096538935 2 437.2810241580009 MULTI CID FTMS 0 0 0 18071 91047.859375 1.0 0 0.0 8 Unmodified _PHLLLPAL_ REV__ENSG00000185085|ENST00000330574|INTS5;REV__ENST00000253727.9_2_19:50880073-50881037:+|nuORF;REV__ENST00000597130.5_3_19:50879767-50881034:+|nuORF 52.33426049586781 0.1282678332820461 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}{I|L}PA{I|L} 8 -1 + 55.271 0.0 0.0 6.3344 6.3344 73.938 0.0 0.0 0.0 0.4438950590558121 12.642273477562329 0.4438950590558121 0.4438950590558121 0 1.2302046884880935 0.0 0.2614393726401688 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}{I|L}PA{I|L};[{I|L}P]H{I|L}{I|L}PA{I|L};[H{I|L}]P{I|L}{I|L}PA{I|L};[H{I|L}]{I|L}P{I|L}PA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}P{I|L}A{I|L};[{I|L}P]H{I|L}P{I|L}A{I|L};[H{I|L}]P{I|L}P{I|L}A{I|L};[H{I|L}]{I|L}PP{I|L}A{I|L};[{I|L}P]{I|L}{I|L}HPA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}PA{I|L}{I|L} 6.3344;6.2836;6.2366;5.8916;5.2146;5.1637;5.1168;4.7718;4.7691;4.5195 +;-;-;-;-;-;-;-;-;- + 308 1 1.485 80083.3 0.949999988079071 13014 5063 18071 HBL1_DMSO_200M_050219_2,18079 HBL1_DMSO_200M_050219_2,18079,PHLLLPAL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18080 96.597 554.0 261340.0 25 0 12256.0 + -1 GLFPSNFVTA 10 125 1052.480742231431 2102.946931529662 2 1052.481616199017 MULTI CID FTMS 0 0 0 18071 85097.46875 1.0 0 0.0 9 nc|ENSG00000136738|Q92783-2|STAM;ENSG00000136738|ENST00000377524|STAM 4 {[QV]|[N{I|L}]|[RA]|[KV]}MSVA{M(Oxidation (M))|F}VTACCYQV 15 -1 82.979 0.0 0.0 3.9458 0.0 0.0 0.0 470.2138454669236 470.2138454669236 51.53216923517345 0.0 0.0 0.0 0 0.0 1.154901959985743 0.3054621874040891 2.659379381312206 {[QV]|[N{I|L}]|[RA]|[KV]}MSVA{M(Oxidation (M))|F}VTACCYQV 3.9458 - 18693 1 1.485 97536.7 1.0 13015 5063 18071 HBL1_DMSO_200M_050219_2,18080 HBL1_DMSO_200M_050219_2,18080, False False GLFPSNFVTA 96.597388 1052.48161619902 1068623.0 18071.0 nc|ENSG00000136738|Q92783-2|STAM;;ENSG00000136738|ENST00000377524|STAM 5.822729269663493 1.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18081 96.605 313.0 251710.0 25 0 18789.0 + 30684 RFPPTPPLF 9 124 536.30378978593 0 536.3050414919853 PEAK CID FTMS 0 0 0 18071 87978.7421875 0.4013797555069392 -3 0.2576675415039062 10 Unmodified _RFPPTPPLF_ chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A;ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A 26.88365393820708 0.1386685954232994 4 P 1 8 9.6041 0.0 0.0 0.89708 0.0 0.0 598.3236942346615 372.19346033267817 970.5171545673396 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + P 0.89708 + + 59 + 1 1.485 67274.0 1.0 13016 5063 18071 HBL1_DMSO_200M_050219_2,18081 HBL1_DMSO_200M_050219_2,18081,RFPPTPPLF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18082 96.618 800.0 157770.0 25 0 8666.7 + 12562 GVIDDAFAL 9 112 920.4722065709096 919.4649301043096 1 920.4778320193292 MULTI CID FTMS 0 0 0 18071 89529.828125 0.0292993674672328 5 -0.6113052368164062 11 Unmodified _GVIDDAFAL_ ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA 70.71552829651908 0.0208223590022201 4 [VG]ADD{I|L}{M(Oxidation (M))|F}A{I|L} 9 2 + 67.807 0.0 0.0 7.3746 7.3746 79.82 0.0 0.0 0.0 14.436974992327125 16.478174818886373 14.436974992327125 1.708187539523749 0 0.3054621874040891 1.6989700043360187 1.4731975075880328 0.0 [VG]ADD{I|L}{M(Oxidation (M))|F}A{I|L};[VG]{I|L}DDA{M(Oxidation (M))|F}A{I|L};[VG]ADD{M(Oxidation (M))|F}{I|L}A{I|L};[VG]{I|L}DAD{M(Oxidation (M))|F}A{I|L};[VG]AD{I|L}D{M(Oxidation (M))|F}A{I|L};[VG]ADD{M(Oxidation (M))|F}A{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}DN{I|L}{M(Oxidation (M))|F}A{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VD{I|L}{M(Oxidation (M))|F}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DD{I|L}{M(Oxidation (M))|F}A{I|L};[VG]ADD{I|L}A{M(Oxidation (M))|F}{I|L} 7.3746;7.1888;6.8993;6.4216;6.2301;6.0003;5.8045;5.6686;5.6686;5.5747 -;+;-;-;-;-;-;-;-;- + 3880 1 1.485 87639.1 0.4600000083446502 13017 5063 18071 HBL1_DMSO_200M_050219_2,18082 HBL1_DMSO_200M_050219_2,18082,GVIDDAFAL True True GVIDDAFAL 96.618417 920.477832019329 24201838.0 18071.0 nc|ENSG00000164944|Q69YN4-4|VIRMA;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA 3.3308656215667725 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18084 96.623 15.0 3395400.0 25 0 282980.0 + 44572 YPFFRGVTI 9 68 550.300497040935 1098.58644114867 2 550.3010742068291 MULTI CID FTMS 0 0 0 18083 2684649.75 0.1199004830141152 4 -0.5172500610351562 1 Unmodified _YPFFRGVTI_ ENSG00000151465|ENST00000281141|CDC123;ENST00000467016.1_1_10:12238244-12240776:+|nuORF 20.580933911654288 0.2795815587326093 4 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 7 3 52.211 0.0 0.0 4.7525 0.0 0.0 0.0 128.07203088931877 128.07203088931877 29.0232697082579 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.3494850021680094 YP{M(Oxidation (M))|F}{M(Oxidation (M))|F}RRT 4.7525 - 68 + 1 1.485 44373.2 1.0 13018 5064 18083 HBL1_DMSO_200M_050219_2,18084 HBL1_DMSO_200M_050219_2,18084,YPFFRGVTI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18085 96.624 50.0 1314200.0 25 0 238920.0 + 15662 IQLPSEKAIFL 11 72 629.8736097460296 1257.7326665588591 2 629.8744384646416 MULTI CID FTMS 0 0 0 18083 1047396.1875 0.9052976179993596 1 -0.1209182739257812 2 Unmodified _IQLPSEKAIFL_ ENSG00000034713|ENST00000037243|GABARAPL2 42.312485326615175 0.1767732348921932 4 [Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L} 11 5 + 65.979 0.0 0.0 5.2458 5.2458 81.505 0.0 0.0 0.0 19.145845000778536 7.301373021504347 7.301373021504347 9.128498242810991 0 1.1237125054200234 1.3979400086720375 0.805462187404089 0.4247425010840047 [Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CP]|[EA]}A{I|L}{I|L}[AG]{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CP]|[EA]}{I|L}A{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{I|L}PRRC{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{[CP]|[EA]}{I|L}A{I|L}[AG]{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{I|L}P[RK]M{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]G{[CP]|[EA]}A{I|L}{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L};[Q{I|L}]{I|L}P{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}RR{I|L};[{I|L}A]G{[CP]|[EA]}A{I|L}{I|L}[AG]{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]G{[CP]|[EA]}{I|L}A{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L} 5.2458;4.52;4.3524;3.7236;3.6266;3.5836;3.4643;2.8728;2.7409;2.5709 -;-;-;-;-;-;-;-;-;- 591 1 1.485 57001.9 1.0 13019 5064 18083 HBL1_DMSO_200M_050219_2,18085 HBL1_DMSO_200M_050219_2,18085,IQLPSEKAIFL False True IQLPSEKAIFL 96.624319 629.874438464642 33509796.0 18083.0 ENSG00000034713|ENST00000037243|GABARAPL2 5.187004407246907 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18086 96.625 14.0 3276700.0 25 0 590030.0 + 1474 ALGAAQFVQL 10 70 509.2902044002567 1016.5658558673134 2 509.2904540896416 MULTI CID FTMS 0 0 0 18083 3623202.75 0.9608128053295476 1 -0.1209182739257812 3 Unmodified _ALGAAQFVQL_ REV__ENSG00000224389|ENST00000435363|C4B;REV__ENSG00000244731|ENST00000428956|C4A;REV__ENST00000460841.1_1_6:31959958-31961603:+|nuORF;REV__nc|ENSG00000244731|P0C0L4-2|C4A 16.942295170755138 0.5632667538960775 4 [VG]N{I|L}K{M(Oxidation (M))|F} 6 -1 25.583 0.0 0.0 2.5166 0.0 0.0 0.0 355.20108470936344 355.20108470936344 4.112818134787162 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [VG]N{I|L}K{M(Oxidation (M))|F} 2.5166 - 456 1 1.485 37826.3 1.0 13020 5064 18083 HBL1_DMSO_200M_050219_2,18086 HBL1_DMSO_200M_050219_2,18086,ALGAAQFVQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18087 96.629 186.0 1347400.0 25 0 276300.0 + -1 AFPGASLYL 9 82 938.54973423944 1875.08491554568 2 939.0533325076104 MULTI CID FTMS 0 0 0 18083 513109.875 0.6882714830658846 -2 0.1593246459960937 4 ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2 4 [QP]S{I|L}A{M(Oxidation (M))|F} 6 -1 35.495 0.0 0.0 1.893 0.0 0.0 0.0 1228.7262479033552 1228.7262479033552 23.812281309285623 0.0 0.0 0.0 0 0.0 0.0 1.4361818737241734 0.3252574989159953 [QP]S{I|L}A{M(Oxidation (M))|F} 1.893 - 698 1 1.485 172039.4 1.0 13021 5064 18083 HBL1_DMSO_200M_050219_2,18087 HBL1_DMSO_200M_050219_2,18087, False False AFPGASLYL 96.629119 939.05333250761 31602350.0 18083.0 ENSG00000183283|ENST00000412716|DAZAP2;;nc|ENSG00000183283|Q15038-2|DAZAP2;;nc|ENSG00000183283|Q15038-5|DAZAP2 0.7017590800921122 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18088 96.631 111.0 1085100.0 25 0 281270.0 + -1 FMLFIIIIHT 10 47 632.3609353793588 1262.7073178255175 2 632.3621093630791 MULTI CID FTMS 0 0 0 18083 438007.3125 0.2913428711610044 -1 0.09405517578125 5 Oxidation (M) _FM(Oxidation (M))LFIIIIHT_ REV__ENSG00000184394|ENST00000641086|OR4N5 1.6526216038709556 0.7189921496796233 4 W 1 -1 4.6041 0.0 0.0 0.36462 0.0 0.0 649.3232368702426 424.2856844537719 1073.6089213240143 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.36462 - 3 + 1 1.485 91262.6 1.0 13022 5064 18083 HBL1_DMSO_200M_050219_2,18088 HBL1_DMSO_200M_050219_2,18088,FMLFIIIIHT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18089 96.635 157.0 575640.0 25 0 75049.0 + 10629 FVNDIFERI 9 82 576.8058378406351 1151.5971227480702 2 576.8063232302666 MULTI CID FTMS 0 0 0 18083 424694.6875 0.0195442595118043 7 -0.9800796508789062 6 Unmodified _FVNDIFERI_ ENSG00000124635|ENST00000339812|H2BC11;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18 43.9818466556824 0.0535980856389242 4 {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L} 9 0 + 70.329 0.0 0.0 6.1071 6.1071 84.881 0.0 0.0 0.0 43.67336295911841 9.719712763997563 9.719712763997563 9.018637558036673 0 1.174742501084005 0.0 0.0 0.4247425010840047 + + {M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VN{I|L}D{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VND{I|L}{M(Oxidation (M))|F}[{I|L}V]W;{M(Oxidation (M))|F}V{I|L}ND{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VGG{I|L}D{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VN{I|L}D{M(Oxidation (M))|F}[{I|L}V]W;{M(Oxidation (M))|F}V{I|L}GGD{M(Oxidation (M))|F}ER{I|L};{M(Oxidation (M))|F}VN{I|L}R[C(Carbamidomethyl (C))K]C{I|L};{M(Oxidation (M))|F}VGGD{I|L}{M(Oxidation (M))|F}[{I|L}V]W 6.1071;5.3239;5.3075;4.9027;4.7801;4.5243;4.1196;3.9805;3.8042;3.7343 +;-;-;-;-;-;-;-;-;- + 639 + 1 1.485 75996.1 1.0 13023 5064 18083 HBL1_DMSO_200M_050219_2,18089 HBL1_DMSO_200M_050219_2,18089,FVNDIFERI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18090 96.637 133.0 517350.0 25 0 72341.0 + 30053 QVADFLQNI 9 104 524.2764758057994 1046.5383986783986 2 524.2776367068291 MULTI CID FTMS 0 0 0 18083 386058.6875 0.6768631810078447 -1 0.09405517578125 7 Unmodified _QVADFLQNI_ ENSG00000122952|ENST00000373944|ZWINT;ENST00000494312.5_1_10:58119773-58119881:-|nuORF;nc|ENSG00000122952|O95229-2|ZWINT 81.89019881105858 0.0170587746866453 4 {NN|[MP]|[D{I|L}]|[EV]}QG{M(Oxidation (M))|F}{I|L}QN{I|L} 9 3 + 68.021 0.0 0.0 6.4996 6.4996 80.45 0.0 0.0 0.0 3.4948500216800937 9.889917747712635 3.4948500216800937 3.4678748622465605 0 0.6989700043360187 0.744727494896694 1.7491348669726234 1.1989700043360187 {NN|[MP]|[D{I|L}]|[EV]}QG{M(Oxidation (M))|F}{I|L}QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}GAG{M(Oxidation (M))|F}{I|L}QN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EG{M(Oxidation (M))|F}{I|L}QN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AD{M(Oxidation (M))|F}{I|L}QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}GQ{M(Oxidation (M))|F}{I|L}QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}QG{M(Oxidation (M))|F}{I|L}[AG]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}GAG{M(Oxidation (M))|F}{I|L}[AG]N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EG{M(Oxidation (M))|F}{I|L}[AG]N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AD{M(Oxidation (M))|F}{I|L}[AG]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}GQ{M(Oxidation (M))|F}{I|L}[AG]N{I|L} 6.4996;6.1682;6.1657;6.1619;5.9499;5.6197;5.2925;5.2858;5.282;5.07 -;-;-;+;-;-;-;-;-;- + 1122 1 1.485 58383.9 1.0 13024 5064 18083 HBL1_DMSO_200M_050219_2,18090 HBL1_DMSO_200M_050219_2,18090,QVADFLQNI True True QVADFLQNI 96.637291 524.277636706829 4981523.0 18083.0 nc|ENSG00000122952|O95229-2|ZWINT;;ENST00000494312.5_1_10:58119773-58119881:-|nuORF;;ENSG00000122952|ENST00000373944|ZWINT 6.943514347076416 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18091 96.64 156.0 303170.0 25 0 54387.0 + 43929 YGIENEVFL 9 83 542.2716229698215 1082.5286930064428 2 542.2715942263603 MULTI CID FTMS 0 0 0 18083 299331.875 0.4930218098360183 2 -0.2471389770507812 8 Unmodified _YGIENEVFL_ ENSG00000111716|ENST00000350669|LDHB;ENST00000542765.4_1_12:21788478-21790169:-|nuORF 16.942295170755138 0.3780752226737986 4 {NN|[MP]|[D{I|L}]|[EV]}NE 4 6 18.633 0.0 0.0 1.7212 0.0 0.0 0.0 608.3074765359928 608.3074765359928 2.4350126370841707 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.2742275032520141 0.0 {NN|[MP]|[D{I|L}]|[EV]}NE 1.7212 - 121 1 1.485 45678.4 1.0 13025 5064 18083 HBL1_DMSO_200M_050219_2,18091 HBL1_DMSO_200M_050219_2,18091,YGIENEVFL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18092 96.645 243.0 321780.0 25 0 29339.0 + + 18875 ALPVSLPQI 9 88 469.2892609698008 936.5639690064016 2 469.2897521853447 MULTI CID FTMS 0 0 0 18083 246542.453125 0.8839356890659693 1 -0.1209182739257812 9 Unmodified _LASVPLPQL_ ENSG00000064703|ENST00000369702|DDX20 46.020951573049366 0.0490941689151868 4 [{I|L}A]AT{I|L}A{I|L}DV 9 -1 50.785 0.0 0.0 5.4225 0.0 0.0 0.0 66.03577600650624 66.03577600650624 33.82245020145518 0.0 0.0 0.0 0 1.4291746928241125 2.0 0.9916440611282624 0.0 [{I|L}A]AT{I|L}A{I|L}DV 5.4225 - 335 + 1 1.485 67418.6 1.0 13026 5064 18083 HBL1_DMSO_200M_050219_2,18092 HBL1_DMSO_200M_050219_2,18092,LASVPLPQL False False ALPVSLPQI 96.644927 469.289752185345 3651812.75 18083.0 ENSG00000064703|ENST00000369702|DDX20 0.2245422899723053 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18093 96.649 199.0 431820.0 25 0 57008.0 + 44274 YLLDQHILI 9 100 564.3275156599526 1126.6404783867051 2 564.3284179568291 MULTI CID FTMS 0 0 0 18083 206700.625 0.5495723677869676 -2 0.1593246459960937 10 Unmodified _YLLDQHILI_ ENSG00000168918|ENST00000445964|INPP5D;nc|ENSG00000168918|Q92835-2|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D 39.94969957227396 0.0757326808254658 4 [H{I|L}]QD{I|L}{I|L}{I|L}Y{I|L} 9 5 + 44.033 0.0 0.0 3.9084 3.9084 75.114 0.0 0.0 0.0 7.544283902093042 7.504311474114331 7.504311474114331 7.544283902093042 0 0.2742275032520141 0.8860566476931632 0.2614393726401688 0.3494850021680094 [H{I|L}]QD{I|L}{I|L}{I|L}Y{I|L};[HQ]D{I|L}{I|L}{I|L}{I|L}Y{I|L};[Y{I|L}]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[H{I|L}]{I|L}{I|L};[HQ]{I|L}D{I|L}{I|L}{I|L}Y{I|L};[Q{I|L}]HD{I|L}{I|L}{I|L}Y{I|L};[H{I|L}][AG]D{I|L}{I|L}{I|L}Y{I|L};{[VA]|[{I|L}G]}AHD{I|L}{I|L}{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}[HN]{I|L}{I|L}{I|L}Y{I|L} 3.9084;3.2387;3.1824;3.0255;3.011;2.7809;2.2118;1.3286 -;-;+;-;-;-;-;- + 453 1 1.485 70160.1 1.0 13027 5064 18083 HBL1_DMSO_200M_050219_2,18093 HBL1_DMSO_200M_050219_2,18093,YLLDQHILI True True YLLDQHILI 96.648735 564.328417956829 3520459.5 18083.0 nc|ENSG00000168918|Q92835-2|INPP5D;;nc|ENSG00000168918|Q92835-3|INPP5D;;ENSG00000168918|ENST00000445964|INPP5D 1.2301218509674072 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18094 96.658 522.0 511580.0 25 0 62103.0 + 15570 IPYITNVL 8 105 932.5454807368744 931.5382042702744 1 932.547900378704 MULTI CID FTMS 0 0 0 18083 193239.53125 0.6183969869714577 -1 0.09405517578125 11 Unmodified _IPYITNVL_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 120.45040980043947 0.0090142352896633 4 [{I|L}P]Y{I|L}TNV{I|L} 8 0 + 80.431 0.0 0.0 8.6343 8.6343 84.058 0.0 0.0 0.0 8.750612633917001 15.000452295863568 8.750612633917001 2.697953115119077 0 1.1194541705953285 1.5228787452803376 0.9916440611282626 0.6747425010840047 + + [{I|L}P]Y{I|L}TNV{I|L};[{I|L}P]YT{I|L}NV{I|L};[{I|L}P]YTN{I|L}V{I|L};[{I|L}P]YTNV{I|L}{I|L};[Y{I|L}]P{I|L}TNV{I|L};[Y{I|L}]PT{I|L}NV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}TNV{I|L};[Y{I|L}]PTN{I|L}V{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}T{I|L}NV{I|L};[{I|L}P]Y{I|L}TN{I|L}V 8.6343;8.3446;7.9886;7.772;7.6949;7.4053;7.3226;7.0492;7.033;7.024 +;-;-;-;-;-;-;-;-;- + 3067 1 1.485 176550.5 1.0 13028 5064 18083 HBL1_DMSO_200M_050219_2,18094 HBL1_DMSO_200M_050219_2,18094,IPYITNVL True True IPYITNVL 96.657952 932.547900378704 2885772.75 18083.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 3.5331127643585205 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18095 96.666 468.0 371510.0 25 0 105160.0 -1 0 145 310.1718487968723 618.3291446605447 2 310.1720153689384 MULTI CID FTMS 0 0 0 18083 170419.375 0.4307293551159922 -1 0.09405517578125 12 4 [{I|L}P]C(Carbamidomethyl (C)) 3 -1 7.6727 0.0 0.0 1.2409 0.0 0.0 0.0 245.13958154849848 245.13958154849848 1.0789227117175957 0.0 0.0 0.0 0 0.2215141619232908 0.0 0.0 0.0 [{I|L}P]C(Carbamidomethyl (C)) 1.2409 - 79 + 1 1.485 138413.8 1.0 13029 5064 18083 HBL1_DMSO_200M_050219_2,18095 HBL1_DMSO_200M_050219_2,18095, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18096 96.68 800.0 219750.0 25 0 45073.0 1094 AGLSGPETPLQ 11 142 357.19022038732203 0 357.1898986697197 PEAK CID FTMS 0 0 0 18083 134263.859375 0.3109174453937045 -1 0.09405517578125 13 Unmodified _AGLSGPETPLQ_ ENST00000326448.11_1_3:160117054-160117270:-|nuORF 9.38312468134398 0.4559597037863106 4 Q 1 10 6.9897 0.0 0.0 0.9812 0.0 0.0 62.0370038926032 519.2402437799436 581.2772476725469 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Q 0.9812 + + 6 + 1 1.485 141247.9 0.4799999892711639 13030 5064 18083 HBL1_DMSO_200M_050219_2,18096 HBL1_DMSO_200M_050219_2,18096,AGLSGPETPLQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18097 96.694 800.0 367330.0 25 0 54156.0 -1 0 110 856.4923904397046 0 856.4919311404228 PEAK CID FTMS 0 0 0 18083 124822.3125 0.9995479990873648 -1 0.09405517578125 14 4 {I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}EA{I|L} 8 -1 27.177 0.0 0.0 1.5884 0.0 0.0 612.3839736410947 183.0414064996704 795.425380140765 0.0 0.0 0.0 0.0 0 0.5 0.0 0.9604093769761876 0.0 {I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}EA{I|L} 1.5884 - 558 + 1 1.485 196319.8 0.5699999928474426 13031 5064 18083 HBL1_DMSO_200M_050219_2,18097 HBL1_DMSO_200M_050219_2,18097, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18098 96.706 591.0 403170.0 25 0 35863.0 30541 RELTHLLLPAS 11 64 625.3668029212363 1248.7190529092725 2 625.3677856326103 MULTI CID FTMS 0 0 0 18083 121894.6796875 0.8347817847492442 -2 0.1593246459960937 15 Unmodified _RELTHLLLPAS_ ENST00000488701.1_1_12:7168132-7170034:+|nuORF;ENST00000543187.5_1_12:7168132-7170034:+|nuORF 5.296884461304476 0.8501568894076437 4 [{I|L}T][HS][TP]M 7 7 14.633 0.0 0.0 1.1719 0.0 0.0 0.0 478.31700335416014 478.31700335416014 4.901275467868302 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.4247425010840047 0.0 [{I|L}T][HS][TP]M 1.1719 - 26 1 1.485 178147.8 1.0 13032 5064 18083 HBL1_DMSO_200M_050219_2,18098 HBL1_DMSO_200M_050219_2,18098,RELTHLLLPAS False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18099 96.72 800.0 220950.0 25 0 22935.0 42172 VSDPSEQEV 9 150 495.2240183610718 988.4334837889436 2 495.2232543826103 MULTI CID FTMS 0 0 0 18083 105477.609375 0.4605140651694781 -1 0.09405517578125 16 Unmodified _VSDPSEQEV_ ENSG00000159753|ENST00000334583|CARMIL2;ENST00000602633.1_1_16:67683966-67685573:+|nuORF;nc|ENSG00000159753|Q6F5E8-2|CARMIL2 19.256988751693697 0.3154191944385105 4 VT{[YC]|[HE]}[C(Carbamidomethyl (C))C]K{I|L} 8 8 + 30.341 0.0 0.0 3.0696 3.0696 76.946 0.0 0.0 0.0 14.508520265803517 0.6348625752110593 0.6348625752110593 11.929053455237549 0 0.1747425010840047 0.6989700043360187 0.0 0.6989700043360187 VT{[YC]|[HE]}[C(Carbamidomethyl (C))C]K{I|L};V{M(Oxidation (M))|F}[WY]Y[DP];V{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]T[DP];VT{[YC]|[HE]}EE{M(Oxidation (M))|F}V;V{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}P[DP];V{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PA]S[DP];V{M(Oxidation (M))|F}[YG]EE{M(Oxidation (M))|F}V;V{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PG]E[PS];V{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HM][QA];V{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PA]D[PS] 3.0696;1.8627;1.7915;1.5333;1.4869;1.445;1.2413;1.0229;0.85406;0.67649 -;-;-;-;-;-;-;-;-;- 387 + 1 1.485 136061.9 0.5 13033 5064 18083 HBL1_DMSO_200M_050219_2,18099 HBL1_DMSO_200M_050219_2,18099,VSDPSEQEV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18100 96.725 271.0 324480.0 25 0 86546.0 -1 LQSSGCAG 8 73 411.17755372194574 820.3405545106915 2 411.1776611208916 MULTI CID FTMS 0 0 0 18083 103901.0859375 0.2444444750781066 -2 0.1593246459960937 17 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))LQSSGC(Carbamidomethyl (C))AG_ ENST00000412350.6_2_9:1050519-1050555:+|nuORF 2.302733041254933 0.8103549651115762 4 Q 1 -1 6.9897 0.0 0.0 0.85205 0.0 0.0 170.011403109264 519.2439058893186 689.2553089985827 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.85205 + + 6 + 1 1.485 76319.1 1.0 13034 5064 18083 HBL1_DMSO_200M_050219_2,18100 HBL1_DMSO_200M_050219_2,18100,LQSSGCAG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18101 96.74 800.0 84715.0 25 0 4211.2 + 41999 VQPQWVFDSV 10 117 602.8032418608026 1203.591930788405 2 602.8032714724541 MULTI CID FTMS 0 0 0 18083 102688.96875 1.0 0 0.0 18 Unmodified _VQPQWVFDSV_ ENSG00000100029|ENST00000354694|PES1;ENST00000488719.1_1_22:30975561-30975981:-|nuORF;nc|ENSG00000100029|O00541-2|PES1 43.85829265575387 0.1168243637355526 4 [QP]WVQV{M(Oxidation (M))|F}DSV 10 4 [QP]WVQV + + 31.771 26.911 3.6495 2.6397 2.6397 45.294 0.0 0.0 0.0 0.0 4.859856381998782 0.0 0.0 0 0.4247425010840047 0.0 1.0356668758921828 0.0 [QP]WVQV{M(Oxidation (M))|F}DSV 2.6397 - 372 + 1 1.485 54604.6 0.5299999713897705 13035 5064 18083 HBL1_DMSO_200M_050219_2,18101 HBL1_DMSO_200M_050219_2,18101,VQPQWVFDSV True True VQPQWVFDSV 96.739514 602.803271472454 1303475.375 18083.0 ENST00000488719.1_1_22:30975561-30975981:-|nuORF;;ENSG00000100029|ENST00000354694|PES1;;nc|ENSG00000100029|O00541-2|PES1 6.010106563568115 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18103 96.745 94.0 530870.0 25 0 124240.0 + 18747 LALRIILS 8 57 449.8076860675103 897.6008192018205 2 449.8079406619072 MULTI CID FTMS 0 0 0 18102 518972.84375 0.0886062672238511 3 -0.396331787109375 1 Unmodified _LALRIILS_ REV__ENSG00000113522|ENST00000378823|RAD50;REV__nc|ENSG00000113522|Q92878-2|RAD50;REV__nc|ENSG00000113522|Q92878-3|RAD50 52.268347100219714 0.1285778651304833 4 [{I|L}A]{I|L}R{I|L}{I|L}S{I|L} 8 -1 + 51.324 0.0 0.0 5.7179 5.7179 89.745 0.0 0.0 0.0 7.02684409496328 20.86610056368244 7.02684409496328 51.32367546928919 0 1.6989700043360187 1.6989700043360187 0.0 0.0 [{I|L}A]{I|L}R{I|L}{I|L}S{I|L} 5.7179 - 27 1 1.475 45120.1 1.0 13036 5065 18102 HBL1_DMSO_200M_050219_2,18103 HBL1_DMSO_200M_050219_2,18103,LALRIILS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18104 96.746 39.0 1232900.0 25 0 186020.0 + 17925 KQVEEIFNLKF 11 69 465.5940681935475 1393.7603751808426 3 465.5943786501884 MULTI CID FTMS 0 0 0 18102 1109871.75 0.7394790084872517 1 -0.126220703125 2 Unmodified _KQVEEIFNLKF_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 59.36838082759317 0.0717085717264091 4 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L} 6 7 56.419 0.0 0.0 4.048 0.0 0.0 0.0 664.3416010128826 664.3416010128826 29.43742728819068 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.1549471895720984 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L} 4.048 - 293 1 1.475 47465.4 1.0 13037 5065 18102 HBL1_DMSO_200M_050219_2,18104 HBL1_DMSO_200M_050219_2,18104,KQVEEIFNLKF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18105 96.748 57.0 750050.0 25 0 152460.0 + 17927 KQVEEIFNLKF 11 61 697.8868557863777 1393.7591586395554 2 697.8881103396416 MULTI CID FTMS 0 0 0 18102 956641.875 0.9623631842782332 1 -0.126220703125 3 Unmodified _KQVEEIFNLKF_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 57.2037768669896 0.0804934932440564 4 [KQ]VEE{I|L}{M(Oxidation (M))|F}N{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 11 0 + 77.471 0.0 0.0 5.5585 5.5585 80.266 0.0 0.0 0.0 0.8354605145007525 64.28389519906656 0.8354605145007525 6.2371250542002485 0 2.1989700043360187 0.0 0.0 1.7302046884880935 + + [KQ]VEE{I|L}{M(Oxidation (M))|F}N{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[K{I|L}]NEE{I|L}{M(Oxidation (M))|F}N{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[KQ]VEE{I|L}{M(Oxidation (M))|F}GG{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[K{I|L}]GGEE{I|L}{M(Oxidation (M))|F}N{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[K{I|L}]NEE{I|L}{M(Oxidation (M))|F}GG{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[K{I|L}]GGEE{I|L}{M(Oxidation (M))|F}GG{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};EEV[KQ]{I|L}{M(Oxidation (M))|F}N{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};EEV[KQ]{I|L}{M(Oxidation (M))|F}GG{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.5585;5.111;4.9035;4.456;4.456;3.8032;3.151;2.4961 +;-;-;-;-;-;-;- + 263 1 1.475 42316.9 1.0 13038 5065 18102 HBL1_DMSO_200M_050219_2,18105 HBL1_DMSO_200M_050219_2,18105,KQVEEIFNLKF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18106 96.749 67.0 1023400.0 25 0 179580.0 + 14106 AIMDIVIKV 9 81 501.3032265673282 1000.5919002014564 2 501.3072387576103 MULTI CID FTMS 0 0 0 18102 730695.125 0.0067923477682206 -4 0.3787994384765625 4 Unmodified _IASNGSLLKV_ ENSG00000172071|ENST00000303236|EIF2AK3 20.41453444215458 0.5050059513928961 4 [{I|L}A]MD{I|L}V{I|L}KV 9 5 + 66.533 0.0 0.0 6.6494 6.6494 93.62 0.0 0.0 0.0 24.13744186714655 9.766061414775336 9.766061414775336 66.53321703291442 0 0.75 2.0 0.0 0.2614393726401688 [{I|L}A]MD{I|L}V{I|L}KV 6.6494 - 256 + 1 1.475 58238.8 1.0 13039 5065 18102 HBL1_DMSO_200M_050219_2,18106 HBL1_DMSO_200M_050219_2,18106,IASNGSLLKV False True AIMDIVIKV 96.749272 501.30723875761 4803914.5 18102.0 ENSG00000172071|ENST00000303236|EIF2AK3 5.577473322550456 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18107 96.751 79.0 790940.0 25 0 191740.0 + -1 IIEWICLL 8 63 530.296637325188 1058.578721717176 2 530.2970458865166 MULTI CID FTMS 0 0 0 18102 563084.4375 0.1195523843302429 -2 0.2149734497070312 5 Carbamidomethyl (C) _IIEWIC(Carbamidomethyl (C))LL_ REV__ENST00000456324.5_1_19:36727152-36727236:+|nuORF 20.871210003555333 0.6025813472596342 4 M{I|L}{I|L}{I|L} 4 -1 36.938 0.0 0.0 3.4894 0.0 0.0 570.2782459943375 0.0 570.2782459943375 0.0 19.03335040558744 0.0 0.0 0 0.5 0.0 0.0 0.0 M{I|L}{I|L}{I|L} 3.4894 - 39 1 1.475 56417.7 1.0 13040 5065 18102 HBL1_DMSO_200M_050219_2,18107 HBL1_DMSO_200M_050219_2,18107,IIEWICLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18108 96.753 109.0 679280.0 25 0 97709.0 + 41473 VPLPRLLEV 9 82 518.3312528781033 1034.6479528230066 2 518.3317138552666 MULTI CID FTMS 0 0 0 18102 507463.53125 0.1782248638567102 3 -0.396331787109375 6 Unmodified _VPLPRLLEV_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 34.40172386719151 0.1061884637610825 4 VP{I|L}V 4 5 51.714 0.0 0.0 4.9983 0.0 0.0 0.0 623.3510225885374 623.3510225885374 32.73509716672216 0.0 0.0 0.0 0 0.7302046884880937 1.3979400086720375 0.0 0.0 VP{I|L}V 4.9983 - 56 + 1 1.475 64792.3 1.0 13041 5065 18102 HBL1_DMSO_200M_050219_2,18108 HBL1_DMSO_200M_050219_2,18108,VPLPRLLEV True True VPLPRLLEV 96.753399 518.331713855267 86334216.0 18102.0 nc|ENSG00000113569|O75694-2|NUP155;;ENSG00000113569|ENST00000231498|NUP155 6.195153713226318 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18109 96.756 99.0 607110.0 25 0 36909.0 + 4193 DAPIVAHLWEY 11 86 657.3296219598126 1312.644690986425 2 657.3295165896416 MULTI CID FTMS 0 0 0 18102 508715.1875 0.8500327817628547 1 -0.126220703125 7 Unmodified _DAPIVAHLWEY_ ENSG00000110090|ENST00000265641|CPT1A;nc|ENSG00000110090|P50416-2|CPT1A 51.41523569358685 0.1097924807909074 4 [{I|L}P]VAH{I|L}WEGEY 11 4 + 56.969 0.0 0.0 4.34 4.34 75.093 0.0 0.0 0.0 9.586073148417746 4.017963694660089 4.017963694660089 6.020599913279625 0 0.3182503180159344 2.0 0.0 0.0 [{I|L}P]VAH{I|L}WEGEY;[{I|L}P]VAHW{I|L}EGEY;[H{I|L}]AVP{I|L}WEGEY;[HA]{I|L}VP{I|L}WEGEY;[H{I|L}]G{I|L}P{I|L}WEGEY;[{I|L}P]VAH{[MS]|[{M(Oxidation (M))|F}A]}{I|L}PGEY;[{I|L}P]VAH{I|L}{[MS]|[{M(Oxidation (M))|F}A]}PGEY;[H{I|L}]AV{I|L}PWEGEY;[HA]V{I|L}P{I|L}WEGEY;[HA]{I|L}V{I|L}PWEGEY 4.34;3.8813;3.6097;3.5145;3.4756;3.4153;3.4153;3.3804;3.3804;3.2852 -;-;-;-;-;-;-;-;-;- 2021 1 1.475 48993.5 1.0 13042 5065 18102 HBL1_DMSO_200M_050219_2,18109 HBL1_DMSO_200M_050219_2,18109,DAPIVAHLWEY True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18110 96.76 210.0 523660.0 25 0 24940.0 -1 0 101 791.3727088192045 2371.096297057813 3 791.7079955935478 MULTI CID FTMS 0 0 0 18102 418123.25 0.8605445121406102 3 -0.396331787109375 8 4 [YK]YPPPPKH 9 -1 51.899 0.0 0.0 2.1888 0.0 0.0 0.0 1260.4990847946813 1260.4990847946813 18.68859168991245 0.0 0.0 0.0 0 1.0 1.0457574905606752 0.0 0.9124379954164592 [YK]YPPPPKH 2.1888 - 17576 1 1.475 84861.2 1.0 13043 5065 18102 HBL1_DMSO_200M_050219_2,18110 HBL1_DMSO_200M_050219_2,18110, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18111 96.762 121.0 675950.0 25 0 73374.0 -1 AYSPQCNQW 9 95 577.2379345688344 1152.4613162044686 2 577.2390624880791 MULTI CID FTMS 0 0 0 18102 345448.0625 0.4897935619149873 -1 0.1209182739257812 9 Carbamidomethyl (C) _AYSPQC(Carbamidomethyl (C))NQW_ ENSG00000135686|ENST00000564996|KLHL36;ENST00000325279.4_1_16:84693236-84695736:+|nuORF;nc|ENSG00000135686|Q8N4N3-2|KLHL36 8.593279151180031 0.6146971463335029 4 ND{I|L}{M(Oxidation (M))|F}{I|L}VW 7 -1 30.253 0.0 0.0 2.6251 0.0 0.0 246.99800782396693 0.0 246.99800782396693 0.0 9.9623084726246 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 ND{I|L}{M(Oxidation (M))|F}{I|L}VW 2.6251 - 358 + 1 1.475 65351.9 1.0 13044 5065 18102 HBL1_DMSO_200M_050219_2,18111 HBL1_DMSO_200M_050219_2,18111,AYSPQCNQW False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18112 96.766 213.0 390370.0 25 0 28926.0 + 20644 LLPTGVFQV 9 109 487.2900140083928 972.5654750835856 2 487.2906982302666 MULTI CID FTMS 0 0 0 18102 229544.1875 0.8299510825364407 -1 0.1209182739257812 10 Unmodified _LLPTGVFQV_ ENSG00000136147|ENST00000378319|PHF11;ENST00000482487.5_1_13:50070137-50095117:+|nuORF 30.22481116460888 0.1466181017706357 4 [TA]{I|L} 3 8 22.932 0.0 0.0 2.3579 0.0 0.0 0.0 684.3892916315061 684.3892916315061 1.0277777790776064 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [TA]{I|L} 2.3579 - 517 + 1 1.475 68438.8 1.0 13045 5065 18102 HBL1_DMSO_200M_050219_2,18112 HBL1_DMSO_200M_050219_2,18112,LLPTGVFQV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18113 96.773 380.0 378850.0 25 0 32940.0 + 9881 FPFPKPALI 9 136 515.3096516245355 1028.604750315871 2 515.3106567263603 MULTI CID FTMS 0 0 0 18102 215742.046875 0.5826766725774856 -2 0.2149734497070312 11 Unmodified _FPFPKPALI_ ENSG00000172888|ENST00000339296|ZNF621;ENSG00000182983|ENST00000440367|ZNF662;ENST00000490457.5_1_3:40567331-40615968:+|nuORF;nc|ENSG00000172888|Q6ZSS3-2|ZNF621;nc|ENSG00000182983|Q6ZS27-3|ZNF662 50.855029805455786 0.0384952370514206 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[PA]{I|L}P{M(Oxidation (M))|F}{I|L} 9 4 + 47.858 0.0 0.0 4.6528 4.6528 68.867 0.0 0.0 0.0 1.3071968632008435 1.3071968632008435 1.3071968632008435 1.3071968632008435 0 0.8807196863200843 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[PA]{I|L}P{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK[PA]{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[PA]P{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]PKP{M(Oxidation (M))|F}P{M(Oxidation (M))|F}{I|L};[PA]{I|L}KP{M(Oxidation (M))|F}P{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}P{M(Oxidation (M))|F}PKVVPV;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK{I|L}{I|L}[PA];[{I|L}A]PKM{I|L}P{M(Oxidation (M))|F}{I|L};[PA]{I|L}KM{I|L}P{M(Oxidation (M))|F}{I|L};[{I|L}A]PG{I|L}W{I|L}{M(Oxidation (M))|F}{I|L} 4.6528;4.5257;4.2659;3.0867;3.085;3.0795;2.9013;2.7941;2.7923;2.7768 -;+;-;-;-;-;-;-;-;- + 1291 1 1.475 118133.0 1.0 13046 5065 18102 HBL1_DMSO_200M_050219_2,18113 HBL1_DMSO_200M_050219_2,18113,FPFPKPALI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18114 96.782 523.0 262160.0 25 0 70162.0 -1 0 94 364.1960351808136 363.1887587142136 1 364.1963073611259 MULTI CID FTMS 0 0 0 18102 152805.09375 0.7027942455752538 -1 0.1209182739257812 12 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.475 111719.6 1.0 13047 5065 18102 HBL1_DMSO_200M_050219_2,18114 HBL1_DMSO_200M_050219_2,18114, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18115 96.792 573.0 143340.0 25 0 9836.8 + 25667 NGFPVFATV 9 112 476.2495637926824 950.4845746521648 2 476.2490722537041 MULTI CID FTMS 0 0 0 18102 141387.953125 1.0 0 0.0 13 Unmodified _NGFPVFATV_ ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF 21.74664581756881 0.2544899275067181 4 [{M(Oxidation (M))|F}V]PA 4 6 24.693 0.0 0.0 2.5979 0.0 0.0 0.0 533.2338203765775 533.2338203765775 7.460762528683702 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]PA 2.5979 - 236 1 1.475 66587.3 1.0 13048 5065 18102 HBL1_DMSO_200M_050219_2,18115 HBL1_DMSO_200M_050219_2,18115,NGFPVFATV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18116 96.796 201.0 328700.0 25 0 77562.0 -1 0 71 334.1575105127467 666.3004680922934 2 334.1569091677666 MULTI CID FTMS 0 0 0 18102 137922.03125 1.0 0 0.0 14 4 D 1 -1 0.088644 0.0 0.0 0.013304 0.0 0.0 439.22043376787775 109.03004633121328 548.250480099091 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.013304 - 2 + 1 1.475 58392.7 1.0 13049 5065 18102 HBL1_DMSO_200M_050219_2,18116 HBL1_DMSO_200M_050219_2,18116, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18117 96.81 800.0 286420.0 25 0 35344.0 + -1 VLPESLPVL 9 110 967.5293075352432 1933.044062137286 2 967.5305053591728 MULTI CID FTMS 0 0 0 18102 121490.578125 1.0 0 0.0 15 nc|ENSG00000147874|Q7Z4H7-3|HAUS6;ENST00000456660.1_1_7:53929927-53930191:+|nuORF;ENSG00000147874|ENST00000380502|HAUS6 4 [EP]S{I|L}V{I|L} 6 -1 38.382 0.0 0.0 1.9856 0.0 0.0 0.0 1291.65628072543 1291.65628072543 14.877203139966326 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.5044321917401078 0.0 [EP]S{I|L}V{I|L} 1.9856 - 2829 1 1.475 149427.8 0.6499999761581421 13050 5065 18102 HBL1_DMSO_200M_050219_2,18117 HBL1_DMSO_200M_050219_2,18117, False False VLPESLPVL 96.809868 967.530505359173 898032.375 18102.0 nc|ENSG00000147874|Q7Z4H7-3|HAUS6;;ENST00000456660.1_1_7:53929927-53930191:+|nuORF;;ENSG00000147874|ENST00000380502|HAUS6 0.7699041167894999 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18118 96.825 800.0 267140.0 25 0 34392.0 + 15449 IPPVILRL 8 112 460.8180927148848 919.6216324965696 2 460.8190490603447 MULTI CID FTMS 0 0 0 18102 113953.7890625 0.2734278459125156 -3 0.280242919921875 16 Unmodified _IPPVILRL_ ENST00000495369.1_1_2:128262943-128263081:-|nuORF 30.22481116460888 0.4082965392918993 4 {I|L}PPV{I|L}[R{I|L}]{I|L} 8 0 + 62.389 0.0 0.0 6.7842 6.7842 92.23 0.0 0.0 0.0 50.3988972566097 0.8906251874479665 0.8906251874479665 19.547509540478032 0 0.805462187404089 2.0 0.0 0.0 + + {I|L}PPV{I|L}[R{I|L}]{I|L};{I|L}P{I|L}[VP][R{I|L}]{I|L};{I|L}{I|L}P[VP][R{I|L}]{I|L} 6.7842;4.6586;1.5031 +;-;- + 131 + 1 1.475 164251.4 0.5199999809265137 13051 5065 18102 HBL1_DMSO_200M_050219_2,18118 HBL1_DMSO_200M_050219_2,18118,IPPVILRL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18119 96.839 800.0 190520.0 25 0 51110.0 -1 0 124 339.6902713974112 677.3659898616224 2 339.6898071169853 MULTI CID FTMS 0 0 0 18102 109805.859375 0.6818030998886424 -1 0.1209182739257812 17 4 W 1 -1 6.9897 0.0 0.0 1.0319 0.0 0.0 153.1143715743196 335.1538141165389 488.2681856908585 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.0319 - 24 + 1 1.475 122931.8 0.5 13052 5065 18102 HBL1_DMSO_200M_050219_2,18119 HBL1_DMSO_200M_050219_2,18119, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18120 96.851 692.0 189000.0 25 0 40822.0 -1 0 137 319.1766360756873 636.3387192181747 2 319.1762573122978 MULTI CID FTMS 0 0 0 18102 95451.6484375 1.0 0 0.0 18 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 25 1 1.475 106246.3 1.0 13053 5065 18102 HBL1_DMSO_200M_050219_2,18120 HBL1_DMSO_200M_050219_2,18120, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18121 96.866 800.0 105110.0 25 0 14773.0 + 2161 AQAEDSVFVIV 11 113 589.309784053782 1176.605015174364 2 589.3105346560478 MULTI CID FTMS 0 0 0 18102 79450.0859375 1.0 0 0.0 19 Unmodified _AQAEDSVFVIV_ ENSG00000115368|ENST00000314761|WDR75;ENST00000436347.5_1_2:190313199-190340140:+|nuORF;ENST00000472286.5_1_2:190306218-190320233:+|nuORF;ENST00000475596.1_1_2:190306218-190316629:+|nuORF 34.221707139014875 0.3014076866608453 4 [QA]EDSAV{M(Oxidation (M))|F}V[{I|L}V] 11 2 + 39.697 0.0 0.0 3.3738 3.3738 67.832 0.0 0.0 0.0 4.603872202248851 15.273208478798324 4.603872202248851 3.0102999566398125 0 0.3807196863200844 0.0 0.8494850021680094 0.2614393726401688 [QA]EDSAV{M(Oxidation (M))|F}V[{I|L}V];[QA]EDASV{M(Oxidation (M))|F}V[{I|L}V];[QA]AEDSV{M(Oxidation (M))|F}V[{I|L}V];[QA]EADSV{M(Oxidation (M))|F}V[{I|L}V];{[CP]|[EA]}QDSAV{M(Oxidation (M))|F}V[{I|L}V];[QA]EDKE{M(Oxidation (M))|F}V[{I|L}V];{[CP]|[EA]}QDASV{M(Oxidation (M))|F}V[{I|L}V];{[CP]|[EA]}QADSV{M(Oxidation (M))|F}V[{I|L}V];{[CP]|[EA]}QDKE{M(Oxidation (M))|F}V[{I|L}V];[QA]EWW{M(Oxidation (M))|F}V[{I|L}V] 3.3738;3.118;3.0611;2.9938;2.8811;2.8719;2.6252;2.501;2.3791;2.2343 -;-;+;-;-;-;-;-;-;- + 826 1 1.475 70474.0 0.5400000214576721 13054 5065 18102 HBL1_DMSO_200M_050219_2,18121 HBL1_DMSO_200M_050219_2,18121,AQAEDSVFVIV False True AQAEDSVFVIV 96.865688 589.310534656048 1060216.875 18102.0 ENST00000472286.5_1_2:190306218-190320233:+|nuORF;;ENSG00000115368|ENST00000314761|WDR75;;ENST00000436347.5_1_2:190313199-190340140:+|nuORF;;ENST00000475596.1_1_2:190306218-190316629:+|nuORF 6.033629417419434 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18123 96.87 9.1 4082600.0 25 0 1219500.0 -1 0 48 326.17111147369275 650.3276700141855 2 326.1710998415947 MULTI CID FTMS 0 0 0 18122 4422070.5 0.5703470684570017 1 -0.1352386474609375 1 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.465 36039.4 1.0 13055 5066 18122 HBL1_DMSO_200M_050219_2,18123 HBL1_DMSO_200M_050219_2,18123, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18124 96.875 289.0 308370.0 25 0 25286.0 + 45207 YQVDLLVKI 9 121 545.828898813549 1089.643244693898 2 545.8289672732353 MULTI CID FTMS 0 0 0 18122 150254.59375 0.409291118049893 2 -0.270111083984375 2 Unmodified _YQVDLLVKI_ ENSG00000184445|ENST00000333479|KNTC1 27.628801355627647 0.1796483985696185 4 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}{[MG]|[TS]}TVE 9 8 27.507 0.0 0.0 2.5244 0.0 0.0 0.0 129.1285101570417 129.1285101570417 5.669467896306131 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3494850021680094 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}V{I|L}{[MG]|[TS]}TVE 2.5244 - 906 1 1.465 73611.4 1.0 13056 5066 18122 HBL1_DMSO_200M_050219_2,18124 HBL1_DMSO_200M_050219_2,18124,YQVDLLVKI False True YQVDLLVKI 96.875442 545.828967273235 6568922.0 18122.0 ENSG00000184445|ENST00000333479|KNTC1 1.065677573283513 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18125 96.879 190.0 562790.0 25 0 32840.0 + -1 VPIVMLPKI 9 100 505.327320716262 504.320044249662 1 505.3276855349541 MULTI CID FTMS 0 0 0 18122 368930.1875 0.4859364583708927 -2 0.2471389770507812 3 nc|ENSG00000138346|P51530-3|DNA2;ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2;nc|ENSG00000138346|P51530-2|DNA2 4 [{I|L}P]VM 4 -1 28.416 0.0 0.0 5.6346 0.0 0.0 0.0 61.05020866207273 61.05020866207273 9.886831541432308 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}P]VM 5.6346 - 128 1 1.465 84736.3 1.0 13057 5066 18122 HBL1_DMSO_200M_050219_2,18125 HBL1_DMSO_200M_050219_2,18125, False False VPIVMLPKI 96.879084 505.327685534954 17045152.0 18122.0 nc|ENSG00000138346|P51530-3|DNA2;;ENSG00000138346|ENST00000358410|DNA2;;nc|ENSG00000138346|P51530-4|DNA2;;nc|ENSG00000138346|P51530-2|DNA2 5.135511636734009 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18126 96.892 765.0 259630.0 25 0 47637.0 -1 0 89 1168.1755756604775 3501.5048975816326 3 1168.843310534954 MULTI CID FTMS 0 0 0 18122 354708.90625 0.2329226112385621 -2 0.2471389770507812 4 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.19962 0.0 0.0 1311.4626471757658 2039.9620019861904 3351.424649161956 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19962 - 26 + 1 1.465 153109.0 1.0 13058 5066 18122 HBL1_DMSO_200M_050219_2,18126 HBL1_DMSO_200M_050219_2,18126, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18127 96.896 196.0 305940.0 25 0 22278.0 23279 LSWNKTVEL 9 80 545.3000667161175 1088.585580499035 2 545.3005248904228 MULTI CID FTMS 0 0 0 18122 224792.65625 0.8003313090009951 -2 0.2471389770507812 5 Unmodified _LSWNKTVEL_ ENSG00000196358|ENST00000393229|NTNG2;nc|ENSG00000196358|Q96CW9-2|NTNG2 26.268140514670165 0.1969607489560049 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}V{[MG]|[TS]}TVE{I|L} 10 5 + 59.659 0.0 0.0 5.4804 5.4804 54.587 0.0 0.0 0.0 6.197887582883936 16.53212513775344 6.197887582883936 0.0 0 0.3054621874040891 1.2218487496163564 0.5 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}V{[MG]|[TS]}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[CA]|SS}{I|L}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{[MG]|[TS]}{I|L}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}{[MG]|[TS]}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[CA]|SS}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}VV{[MG]|[TS]}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[WT]|[RM]}TVE{I|L};{[QN]|[E{I|L}]|[KN]}V{[WT]|[RM]}TVE{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L} 5.4804;5.4804;4.9273;4.9273;4.911;4.911;4.8803;4.8803;4.311;4.311 -;-;-;-;-;-;-;-;-;- 324 1 1.465 52411.8 1.0 13059 5066 18122 HBL1_DMSO_200M_050219_2,18127 HBL1_DMSO_200M_050219_2,18127,LSWNKTVEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18128 96.9 203.0 313430.0 25 0 35608.0 + 30685 RFPPTPPLF 9 96 536.30378978593 0 536.3057739138603 PEAK CID FTMS 0 0 0 18122 219190.78125 1.0 0 0.0 6 Unmodified _RFPPTPPLF_ chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A;ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A 23.1484247019978 0.1725298825155634 4 PP{M(Oxidation (M))|F} 3 6 14.041 0.0 0.0 1.3115 0.0 0.0 598.323098196951 128.07221399478752 726.3953121917385 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 PP{M(Oxidation (M))|F} 1.3115 - 159 + 1 1.465 54762.9 1.0 13060 5066 18122 HBL1_DMSO_200M_050219_2,18128 HBL1_DMSO_200M_050219_2,18128,RFPPTPPLF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18129 96.914 800.0 222670.0 25 0 15247.0 -1 0 98 1186.556913808899 2371.099274684598 2 1187.555102527142 MULTI CID FTMS 0 0 0 18122 196576.96875 1.0 0 0.0 7 4 Y[WC(Carbamidomethyl (C))][HQ]PPPPPP{[QN]|[E{I|L}]|[KN]} 13 -1 49.54 0.0 0.0 2.0893 0.0 0.0 754.3913411902607 0.0 754.3913411902607 0.0 26.93462852865327 0.0 0.0 0 0.0 0.0 0.2742275032520141 1.7302046884880935 Y[WC(Carbamidomethyl (C))][HQ]PPPPPP{[QN]|[E{I|L}]|[KN]} 2.0893 - 3254 + 1 1.465 108294.4 0.7699999809265137 13061 5066 18122 HBL1_DMSO_200M_050219_2,18129 HBL1_DMSO_200M_050219_2,18129, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18130 96.923 538.0 175090.0 25 0 13792.0 + 36358 SYPLFSQEF 9 118 559.2634316867733 1116.5123104403465 2 559.2641479372978 MULTI CID FTMS 0 0 0 18122 125409.84375 0.8967709461690285 1 -0.1352386474609375 8 Unmodified _SYPLFSQEF_ ENSG00000065308|ENST00000182527|TRAM2 64.23631603340823 0.0237365939569086 4 [{I|L}P]{M(Oxidation (M))|F}SQE 6 3 27.062 0.0 0.0 2.4238 0.0 0.0 0.0 412.1468068605215 412.1468068605215 7.113037394097432 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.3494850021680094 0.0 + [{I|L}P]{M(Oxidation (M))|F}SQE 2.4238 + + 676 1 1.465 76259.0 1.0 13062 5066 18122 HBL1_DMSO_200M_050219_2,18130 HBL1_DMSO_200M_050219_2,18130,SYPLFSQEF True True SYPLFSQEF 96.923348 559.264147937298 2931789.0 18122.0 ENSG00000065308|ENST00000182527|TRAM2 7.641671498616536 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18131 96.937 800.0 104830.0 25 0 6848.0 + + -1 YNTIDDLKDQIVDL 14 121 832.9220558908268 1663.8295588484534 2 832.9231445193291 MULTI CID FTMS 0 0 0 18122 116941.40625 1.0 0 0.0 9 Carbamidomethyl (C),Oxidation (M) _WRRWLTRM(Oxidation (M))C(Carbamidomethyl (C))RQ_ ENSG00000171403|ENST00000246662|KRT9;P35527 0.0 0.8751479354844584 4 {NN|[MP]|[D{I|L}]|[EV]}AGKVEDTNY{I|L} 12 -1 30.281 0.0 0.0 1.8199 0.0 0.0 0.0 342.1644279443555 342.1644279443555 13.977306667007166 0.0 0.0 0.0 0 0.3494850021680094 1.0457574905606752 0.0 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}AGKVEDTNY{I|L} 1.8199 - 3893 1 1.465 60458.1 0.6399999856948853 13063 5066 18122 HBL1_DMSO_200M_050219_2,18131 HBL1_DMSO_200M_050219_2,18131,WRRWLTRMCRQ False False YNTIDDLKDQIVDL 96.937215 832.923144519329 634076.9375 18122.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 4.948591232299805 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18132 96.951 800.0 202880.0 25 0 24200.0 15609 IPYVQQPHPSL 11 106 639.8445919516753 1277.6746309701505 2 640.3474609255791 MULTI CID FTMS 0 0 0 18122 95184.75 1.0 0 0.0 10 Unmodified _IPYVQQPHPSL_ ENST00000476565.1_1_1:156506896-156507079:-|nuORF 12.240655878213236 0.7805268987462184 4 {I|L} 1 10 12.764 0.0 0.0 0.99902 0.0 0.0 1146.5795667385082 0.0 1146.5795667385082 0.0 2.675566008486747 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.99902 + + 89 + 1 1.465 120970.2 0.5799999833106995 13064 5066 18122 HBL1_DMSO_200M_050219_2,18132 HBL1_DMSO_200M_050219_2,18132,IPYVQQPHPSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18133 96.958 296.0 232110.0 25 0 23211.0 + 10093 FPTKPMFVI 9 109 540.3019340011118 1078.5893150690235 2 540.3030883669853 MULTI CID FTMS 0 0 0 18122 88632.4375 0.3329146426133719 -3 0.3411941528320312 11 Unmodified _FPTKPMFVI_ ENSG00000147535|ENST00000424479|PLPP5;nc|ENSG00000147535|Q8NEB5-2|PLPP5;nc|ENSG00000147535|Q8NEB5-3|PLPP5;nc|ENSG00000147535|Q8NEB5-4|PLPP5 34.40172386719151 0.1061884637610825 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MV{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V{I|L} 9 4 + 41.906 0.0 0.0 3.8853 3.8853 65.558 0.0 0.0 0.0 11.5933415172585 14.09256854528806 11.5933415172585 1.0914446942506757 0 0.8807196863200843 1.5228787452803376 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MV{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MK[TP]{M(Oxidation (M))|F}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MV{[QV]|[N{I|L}]|[RA]|[KV]}V{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MK[TP]V{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}PAKY{M(Oxidation (M))|F}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}V{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V{I|L};[QP]{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{I|L}{M(Oxidation (M))|F}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K[TP]{M(Oxidation (M))|F}V{I|L};{[QN]|[E{I|L}]|[KN]}PAKYV{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V{I|L} 3.8853;3.7841;2.9794;2.8782;2.8104;2.2677;2.2399;2.1665;1.9045;1.7869 -;-;-;-;-;-;-;-;-;- 476 1 1.465 60787.2 1.0 13065 5066 18122 HBL1_DMSO_200M_050219_2,18133 HBL1_DMSO_200M_050219_2,18133,FPTKPMFVI True True FPTKPMFVI 96.957946 540.303088366985 3350679.75 18122.0 nc|ENSG00000147535|Q8NEB5-3|PLPP5;;nc|ENSG00000147535|Q8NEB5-2|PLPP5;;ENSG00000147535|ENST00000424479|PLPP5;;nc|ENSG00000147535|Q8NEB5-4|PLPP5 3.6338391304016113 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18134 96.972 800.0 261060.0 25 0 29658.0 + 36256 SYFDAIPVTM 10 118 1143.5426462277317 1142.5353697611315 1 1143.541796863079 MULTI CID FTMS 0 0 0 18122 89079.890625 1.0 0 0.0 12 Unmodified _SYFDAIPVTM_ ENSG00000153395|ENST00000283415|LPCAT1;ENST00000507282.1_1_5:1488500-1495016:-|nuORF 70.33199760932243 0.018925923965799 4 [VP]TM[HM]PVTM 10 6 + 49.848 0.0 0.0 4.3629 4.3629 72.515 0.0 0.0 0.0 5.735476427834186 13.879194432540784 5.735476427834186 3.858696646399906 0 1.0 1.6989700043360187 0.3807196863200844 0.0 [VP]TM[HM]PVTM;[VP]TMSYT{I|L}TM;{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}DA{I|L}PS{I|L}M;[VP]TM[HM]PS{I|L}M;{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}DA{I|L}PVTM;{[{M(Oxidation (M))|F}D]|MM}YSA{I|L}PVTM;{[{M(Oxidation (M))|F}D]|MM}AYS{I|L}PVTM;{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}S{I|L}PS{I|L}M;[VP]TMSYTT{I|L}M;{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}S{I|L}PVTM 4.3629;4.0252;3.8609;3.8405;3.7057;3.6857;3.5221;3.5032;3.5028;3.348 -;-;-;-;+;-;-;-;-;- + 1673 1 1.465 126679.4 0.5199999809265137 13066 5066 18122 HBL1_DMSO_200M_050219_2,18134 HBL1_DMSO_200M_050219_2,18134,SYFDAIPVTM True True SYFDAIPVTM 96.97181 1143.54179686308 488861.0 18122.0 ENST00000507282.1_1_5:1488500-1495016:-|nuORF;;ENSG00000153395|ENST00000283415|LPCAT1 6.545687675476074 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18135 96.986 800.0 127790.0 25 0 20696.0 -1 MWHWDCWCVCE 11 52 855.8035156130791 0 855.8035156130791 PEAK CID FTMS 0 0 0 -1 0 13 Acetyl (Protein N-term),3 Carbamidomethyl (C) _(Acetyl (Protein N-term))MWHWDC(Carbamidomethyl (C))WC(Carbamidomethyl (C))VC(Carbamidomethyl (C))E_ ENST00000477757.5_1_10:96997826-96998342:-|nuORF 0.0 0.4761840153648598 4 T 1 -1 5.4846 0.0 0.0 0.32081 0.0 0.0 1383.3953480212767 222.12581812076408 1605.5211661420408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.32081 - 8 + 1 1.465 77752.8 0.5400000214576721 13067 5066 18122 HBL1_DMSO_200M_050219_2,18135 HBL1_DMSO_200M_050219_2,18135,MWHWDCWCVCE False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18136 97.001 800.0 465880.0 25 0 18212.0 + 2983 AVIESVTFL 9 119 978.551041644972 977.5437651783718 1 978.5530273318292 MULTI CID FTMS 0 0 0 18122 81476.765625 0.1730732197632429 -2 0.2471389770507812 14 Unmodified _AVIESVTFL_ ENSG00000115760|ENST00000421745|BIRC6 77.98433622928108 0.0180125044636492 4 {[VA]|[{I|L}G]}{I|L}ESVT{M(Oxidation (M))|F}{I|L} 9 0 + 75.65 0.0 0.0 7.7388 7.7388 85.013 0.0 0.0 0.0 14.471580313422194 12.4595372608497 12.4595372608497 3.979400086720375 0 0.6382104921644451 1.3979400086720375 1.924742501084005 0.0 + + {[VA]|[{I|L}G]}{I|L}ESVT{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}{I|L}TDVT{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}{I|L}ESS{I|L}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}{I|L}ESTV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}{I|L}TDS{I|L}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}{I|L}TDTV{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}VASVT{M(Oxidation (M))|F}{I|L};[{I|L}V]AESVT{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SG{I|L}VT{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}{I|L}EST{M(Oxidation (M))|F}V{I|L} 7.7388;7.3317;6.9365;6.7766;6.5294;6.3695;6.2584;6.1592;6.0115;5.935 +;-;-;-;-;-;-;-;-;- + 8626 1 1.465 238249.1 0.5400000214576721 13068 5066 18122 HBL1_DMSO_200M_050219_2,18136 HBL1_DMSO_200M_050219_2,18136,AVIESVTFL True True AVIESVTFL 97.000698 978.553027331829 4267839.0 18122.0 ENSG00000115760|ENST00000421745|BIRC6 5.89309549331665 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18138 97.007 141.0 843260.0 25 0 249900.0 + -1 FMLFIIIIHT 10 36 632.3609353793588 1262.7073178255175 2 632.3617431521416 MULTI CID FTMS 0 0 0 18137 302533.03125 0.2012314393619099 2 -0.2808074951171875 1 Oxidation (M) _FM(Oxidation (M))LFIIIIHT_ REV__ENSG00000184394|ENST00000641086|OR4N5 1.6526216038709556 0.7189921496796233 4 K 1 -1 5.4846 0.0 0.0 0.43435 0.0 0.0 612.378685821575 519.2251070611936 1131.6037928827686 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.43435 - 2 + 1 1.466 89923.0 1.0 13069 5067 18137 HBL1_DMSO_200M_050219_2,18138 HBL1_DMSO_200M_050219_2,18138,FMLFIIIIHT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18139 97.011 167.0 851490.0 25 0 185010.0 -1 0 52 938.54973423944 1875.08491554568 2 939.052783191204 MULTI CID FTMS 0 0 0 18137 257707.21875 0.3456813799302671 1 -0.1348724365234375 2 4 [QP]G{I|L}[VS]{I|L}{I|L} 8 -1 12.022 0.0 0.0 0.64115 0.0 0.0 0.0 1064.5773221221052 1064.5773221221052 7.417958173178418 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.2887254899964357 [QP]G{I|L}[VS]{I|L}{I|L} 0.64115 - 49 1 1.466 99586.8 1.0 13070 5067 18137 HBL1_DMSO_200M_050219_2,18139 HBL1_DMSO_200M_050219_2,18139, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18140 97.012 46.0 1430900.0 25 0 211480.0 + 4028 DALRSILTI 9 81 501.3032265673282 1000.5919002014564 2 501.3042480349541 MULTI CID FTMS 0 0 0 18137 1145743.875 0.0106505306878962 -2 0.2614593505859375 3 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 40.23920728925047 0.0741434193262949 4 [{I|L}A][RD]S{I|L}{I|L}T{I|L} 9 2 + 63.918 0.0 0.0 6.388 6.388 84.579 0.0 0.0 0.0 7.214307641805888 14.973024840566469 7.214307641805888 7.214307641805888 0 1.305462187404089 1.6989700043360187 0.5 0.0 [{I|L}A][RD]S{I|L}{I|L}T{I|L};{[DA]|[EG]}[R{I|L}]S{I|L}{I|L}T{I|L};[K{I|L}][WD]{I|L}{I|L}T{I|L};[{I|L}A][R{I|L}]{[TV]|[{I|L}S]}DT{I|L};[{I|L}A][R{I|L}]{[CA]|SS}{I|L}E{I|L};[{I|L}A][R{I|L}]{[WT]|[RM]}E{I|L};[{I|L}A][R{I|L}]{[TV]|[{I|L}S]}SE{I|L};{[TV]|[{I|L}S]}[WK]{I|L}{I|L}E{I|L};[K{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L}E{I|L};[{I|L}V]DQ[KA][KS]{I|L} 6.388;5.667;3.963;3.5147;3.1118;2.7653;2.7141;2.6065;2.3848;0.94088 -;+;-;-;-;-;-;-;-;- + 229 1 1.466 53929.4 1.0 13071 5067 18137 HBL1_DMSO_200M_050219_2,18140 HBL1_DMSO_200M_050219_2,18140,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18141 97.014 126.0 898110.0 25 0 131930.0 + 40748 VLIPKLPQL 9 92 510.84396369341687 1019.6733744536338 2 510.8446533083916 MULTI CID FTMS 0 0 0 18137 587443.9375 0.2284421422840386 -3 0.3823776245117187 4 Unmodified _VLIPKLPQL_ ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3 74.42276476219924 0.019389277360085 4 [{I|L}V]{I|L}PK{I|L}PQ{I|L} 9 0 + 84.109 0.0 0.0 8.2486 8.2486 94.178 0.0 0.0 0.0 63.83919546326258 14.973024840566469 14.973024840566469 11.98892707138974 0 1.1989700043360187 1.6989700043360187 0.0 1.1307196863200843 + + [{I|L}V]{I|L}PK{I|L}PQ{I|L};[{I|L}V]{I|L}PK{I|L}PGA{I|L};[{I|L}V]{I|L}PK[QP]{I|L}{I|L} 8.2486;7.0729;5.2796 +;-;- + 244 + 1 1.466 93075.1 1.0 13072 5067 18137 HBL1_DMSO_200M_050219_2,18141 HBL1_DMSO_200M_050219_2,18141,VLIPKLPQL True True VLIPKLPQL 97.014389 510.844653308392 66851532.0 18137.0 ENSG00000172057|ENST00000304046|ORMDL3;;nc|ENSG00000172057|Q8N138-4|ORMDL3 6.022552649180095 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18142 97.017 144.0 443710.0 25 0 59573.0 + 26248 NQLDSLMGL 9 83 495.7503762384249 989.4861995436496 2 495.7501403689384 MULTI CID FTMS 0 0 0 18137 420147.8125 0.4485816959911639 -1 0.1352386474609375 5 Unmodified _NQLDSLMGL_ ENSG00000135148|ENST00000412615|TRAFD1 81.61307344734483 0.0171259190214613 4 {[VA]|[{I|L}G]}ANDS{I|L} 7 7 59.617 0.0 0.0 6.0251 0.0 0.0 0.0 316.1343068036685 316.1343068036685 34.2113462252692 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.8494850021680094 1.3441876774005248 {[VA]|[{I|L}G]}ANDS{I|L} 6.0251 - 232 1 1.466 55437.9 1.0 13073 5067 18137 HBL1_DMSO_200M_050219_2,18142 HBL1_DMSO_200M_050219_2,18142,NQLDSLMGL True True NQLDSLMGL 97.017266 495.750140368938 13754931.0 18137.0 ENSG00000135148|ENST00000412615|TRAFD1 5.235452651977539 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18143 97.02 106.0 541860.0 25 0 42485.0 + 12654 GVLFHNLPSL 10 86 548.8114379393206 1095.6083229454412 2 548.8114501833916 MULTI CID FTMS 0 0 0 18137 336586.25 0.6415958776829265 -1 0.1352386474609375 6 Unmodified _GVLFHNLPSL_ chr1:110871259-110873156|46|174.04|0.0|24.05|+|ENST00000648608|CD53,CD53;ENSG00000143119|ENST00000271324|CD53;ENST00000471220.5_1_1:111415857-111435203:+|nuORF;ENST00000476408.1_1_1:111422872-111441814:+|nuORF 39.957323273325 0.1580177220464651 4 [PS]{I|L}[DV]{I|L}R 7 8 34.001 0.0 0.0 3.1034 0.0 0.0 0.0 312.1566767317268 312.1566767317268 15.78627571852791 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.3807196863200844 [PS]{I|L}[DV]{I|L}R 3.1034 - 714 1 1.466 50675.2 1.0 13074 5067 18137 HBL1_DMSO_200M_050219_2,18143 HBL1_DMSO_200M_050219_2,18143,GVLFHNLPSL False True GVLFHNLPSL 97.019535 548.811450183392 4438762.5 18137.0 chr1:110871259-110873156|46|174.04|0.0|24.05|+|ENST00000648608|CD53,CD53;;ENST00000476408.1_1_1:111422872-111441814:+|nuORF;;ENSG00000143119|ENST00000271324|CD53;;ENST00000471220.5_1_1:111415857-111435203:+|nuORF 5.453744570414226 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18144 97.023 176.0 474220.0 25 0 90717.0 + 19546 LFQDPRSWF 9 73 598.2980622588273 1194.5815715844544 2 598.2984496951103 MULTI CID FTMS 0 0 0 18137 259135.640625 0.3595555196920541 -2 0.2614593505859375 7 Unmodified _LFQDPRSWF_ ENST00000451653.5_2_3:42590110-42590281:-|nuORF 29.081581746732265 0.1611639662936252 4 {I|L}{M(Oxidation (M))|F}QDH 5 5 42.078 0.0 0.0 3.5224 0.0 0.0 0.0 551.2713717096311 551.2713717096311 28.098943791441968 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3807196863200844 {I|L}{M(Oxidation (M))|F}QDH 3.5224 - 142 + 1 1.466 67336.4 1.0 13075 5067 18137 HBL1_DMSO_200M_050219_2,18144 HBL1_DMSO_200M_050219_2,18144,LFQDPRSWF False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18145 97.028 271.0 295910.0 25 0 63347.0 -1 LQSSGCAG 8 83 411.17755372194574 820.3405545106915 2 411.1776000857353 MULTI CID FTMS 0 0 0 18137 231032.234375 0.5435415111242469 1 -0.1348724365234375 8 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))LQSSGC(Carbamidomethyl (C))AG_ ENST00000412350.6_2_9:1050519-1050555:+|nuORF 2.302733041254933 0.8103549651115762 4 KE 2 -1 7.9588 0.0 0.0 0.97018 0.0 0.0 170.01223497042616 390.17148767642817 560.1837226468543 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KE 0.97018 - 7 + 1 1.466 67198.5 1.0 13076 5067 18137 HBL1_DMSO_200M_050219_2,18145 HBL1_DMSO_200M_050219_2,18145,LQSSGCAG False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18146 97.035 372.0 362260.0 25 0 43780.0 + 15803 ISFFYVLYI 9 130 582.8191125062525 1163.623672079305 2 582.8193847537041 MULTI CID FTMS 0 0 0 18137 193773.875 0.166846857008658 -2 0.2614593505859375 9 Unmodified _ISFFYVLYI_ REV__ENST00000497048.5_1_9:110247318-110247534:-|nuORF 44.40701690623563 0.0526327925666318 4 {NN|[MP]|[D{I|L}]|[EV]}WKVD{I|L}Y{I|L} 9 -1 + 75.362 0.0 0.0 6.4765 6.4765 83.368 0.0 0.0 0.0 8.735899786366232 8.384767769392738 8.384767769392738 5.774713899150484 0 1.9291746928241125 2.0 1.66944517631652 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}WKVD{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}WDKV{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}WKDV{I|L}Y{I|L};[WD]KV{I|L}D{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}WV{I|L}D{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VW{I|L}D{I|L}Y{I|L};[WD]KVEV{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}WVEV{I|L}Y{I|L};[WD]K{I|L}VD{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}W{I|L}VD{I|L}Y{I|L} 6.4765;5.9802;5.8418;5.7257;5.6649;5.1058;5.091;5.0302;4.7026;4.6417 -;-;-;-;-;-;-;-;-;- 2120 1 1.466 103477.6 1.0 13077 5067 18137 HBL1_DMSO_200M_050219_2,18146 HBL1_DMSO_200M_050219_2,18146,ISFFYVLYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18147 97.04 290.0 303290.0 25 0 63402.0 -1 0 85 310.1718487968723 618.3291446605447 2 310.1714965701103 MULTI CID FTMS 0 0 0 18137 177656.625 0.4490212660287814 2 -0.2808074951171875 10 4 RV[YQ] 4 -1 10.787 0.0 0.0 1.7446 0.0 0.0 54.04690763459946 0.0 54.04690763459946 0.0 8.022938391270626 0.0 0.0 0 0.4545391030138068 0.0 0.0 0.0 RV[YQ] 1.7446 - 29 + 1 1.466 76062.1 1.0 13078 5067 18137 HBL1_DMSO_200M_050219_2,18147 HBL1_DMSO_200M_050219_2,18147, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18148 97.044 215.0 425860.0 25 0 56999.0 + 10571 FVIHNLPVL 9 109 526.3184343026505 1050.622315672101 2 526.3185302615166 MULTI CID FTMS 0 0 0 18137 171733.203125 1.0 0 0.0 11 Unmodified _FVIHNLPVL_ ENSG00000086475|ENST00000327347|SEPHS1;nc|ENSG00000086475|P49903-3|SEPHS1;nc|ENSG00000086475|P49903-4|SEPHS1 30.22481116460888 0.1466181017706357 4 N{I|L}[VP]{I|L} 5 4 27.888 0.0 0.0 2.6544 0.0 0.0 496.28140829028433 0.0 496.28140829028433 0.0 10.467203307072731 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 + N{I|L}[VP]{I|L} 2.6544 + + 387 1 1.466 78510.5 1.0 13079 5067 18137 HBL1_DMSO_200M_050219_2,18148 HBL1_DMSO_200M_050219_2,18148,FVIHNLPVL False True FVIHNLPVL 97.044064 526.318530261517 4606415.5 18137.0 nc|ENSG00000086475|P49903-3|SEPHS1;;nc|ENSG00000086475|P49903-4|SEPHS1;;ENSG00000086475|ENST00000327347|SEPHS1 5.6060365041097 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18149 97.056 665.0 190990.0 25 0 30899.0 25158 MRLAFERF 8 127 357.19022038732203 0 357.1898681521416 PEAK CID FTMS 0 0 0 18137 157529.1875 0.3647934208091573 2 -0.2808074951171875 12 Unmodified _MRLAFERF_ ENSG00000090661|ENST00000251363|CERS4;ENST00000557925.1_1_19:8315741-8320784:+|nuORF 3.2813086475875832 0.58830031860471 4 K 1 8 6.9897 0.0 0.0 0.9812 0.0 0.0 62.03731496752693 519.2155245416624 581.2528395091894 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.9812 - 4 + 1 1.466 102240.6 1.0 13080 5067 18137 HBL1_DMSO_200M_050219_2,18149 HBL1_DMSO_200M_050219_2,18149,MRLAFERF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18150 97.06 249.0 225960.0 25 0 36873.0 + 9863 FPFGYVSNI 9 93 522.2631012076528 1042.5116494821054 2 522.2640258669853 MULTI CID FTMS 0 0 0 18137 142959.0 0.397417711982731 -3 0.3823776245117187 13 Unmodified _FPFGYVSNI_ ENSG00000159259|ENST00000314103|CHAF1B;ENST00000481458.1_1_21:37771819-37785123:+|nuORF 46.92087301778293 0.0471210510596396 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}VSN{I|L} 9 2 + 60.172 0.0 0.0 5.7719 5.7719 79.59 0.0 0.0 0.0 24.76203644159419 47.95400802141776 24.76203644159419 4.771212547196626 0 0.6069758080123702 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}VSN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{M(Oxidation (M))|F}YVSN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GYV{M(Oxidation (M))|F}SN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}GYVSN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[TA]{M(Oxidation (M))|F}SN{I|L};[YG]{M(Oxidation (M))|F}P{M(Oxidation (M))|F}VSN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]{M(Oxidation (M))|F}DN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[YK]DN{I|L};[YG]{M(Oxidation (M))|F}PV{M(Oxidation (M))|F}SN{I|L};[{I|L}T]{[{M(Oxidation (M))|F}C]|[YS]}{M(Oxidation (M))|F}VSN{I|L} 5.7719;5.3142;5.3142;5.0255;3.5156;3.3316;3.183;3.0631;2.8739;2.6716 -;-;-;+;-;-;-;-;-;- + 731 1 1.466 48609.7 1.0 13081 5067 18137 HBL1_DMSO_200M_050219_2,18150 HBL1_DMSO_200M_050219_2,18150,FPFGYVSNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18151 97.064 208.0 209060.0 25 0 16810.0 + 34103 SLLMLQREL 9 79 551.8185534189189 0 551.8182861208916 PEAK CID FTMS 0 0 0 18137 147477.140625 1.0 0 0.0 14 Unmodified _SLLMLQREL_ REV__ENSG00000095066|ENST00000397668|HOOK2;REV__nc|ENSG00000095066|Q96ED9-2|HOOK2 32.78568957990786 0.0971838787772021 4 E 1 -1 16.594 0.0 0.0 1.5063 0.0 0.0 131.0951100080094 838.4620979322345 969.557207940244 0.0 0.0 0.0 0.0 0 1.0 0.0 0.5 0.0 E 1.5063 + + 59 1 1.466 40205.8 1.0 13082 5067 18137 HBL1_DMSO_200M_050219_2,18151 HBL1_DMSO_200M_050219_2,18151,SLLMLQREL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18152 97.079 800.0 245750.0 25 0 39340.0 -1 0 102 629.3834332407596 628.3761567741595 1 629.3827392458916 MULTI CID FTMS 0 0 0 18137 130516.890625 0.8584671397217003 -4 0.4764328002929687 15 4 {I|L}SVPT{I|L} 6 -1 + 15.562 0.0 0.0 2.4765 2.4765 75.381 0.0 0.0 0.0 4.141785135665568 4.965836378895528 4.141785135665568 10.223027121673567 0 0.1677353201839438 0.8860566476931632 0.0 0.0 {I|L}SVPT{I|L};{[QG]|[NA]}RR{I|L} 2.4765;0.84961 -;- 149 + 1 1.466 147912.4 0.5799999833106995 13083 5067 18137 HBL1_DMSO_200M_050219_2,18152 HBL1_DMSO_200M_050219_2,18152, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18153 97.083 169.0 301160.0 25 0 24572.0 + 20022 LIMSEPSEVL 10 85 559.2926759202469 1116.5707989072937 2 559.2932006716728 MULTI CID FTMS 0 0 0 18137 125276.046875 0.3819315621478192 -1 0.1352386474609375 16 Unmodified _LIMSEPSEVL_ REV__ENSG00000114859|ENST00000265593|CLCN2;REV__nc|ENSG00000114859|P51788-3|CLCN2;REV__nc|ENSG00000114859|P51788-4|CLCN2;REV__nc|ENSG00000114859|P51788-5|CLCN2 11.640296217721598 0.652229146672156 4 {I|L}{I|L}MSD 5 -1 28.161 0.0 0.0 2.5221 0.0 0.0 0.0 554.2854344876249 554.2854344876249 5.764837301042718 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}MSD 2.5221 - 271 1 1.466 44906.2 1.0 13084 5067 18137 HBL1_DMSO_200M_050219_2,18153 HBL1_DMSO_200M_050219_2,18153,LIMSEPSEVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18154 97.095 694.0 254570.0 25 0 17664.0 -1 0 114 808.0436722506764 2421.109187352229 3 808.3780395388603 MULTI CID FTMS 0 0 0 18137 122326.7734375 1.0 0 0.0 17 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 68.611 0.0 0.0 2.8339 0.0 0.0 0.0 1380.4949351643857 1380.4949351643857 53.70309705951136 0.0 0.0 0.0 0 1.424742501084005 1.5228787452803376 0.3807196863200844 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.8339 - 805 1 1.466 131464.5 1.0 13085 5067 18137 HBL1_DMSO_200M_050219_2,18154 HBL1_DMSO_200M_050219_2,18154, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18155 97.107 705.0 128030.0 25 0 16142.0 + 44275 YLLDQHILI 9 116 564.3270141482353 0 564.3270141482353 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _YLLDQHILI_ ENSG00000168918|ENST00000445964|INPP5D;nc|ENSG00000168918|Q92835-2|INPP5D;nc|ENSG00000168918|Q92835-3|INPP5D 18.373094154950223 0.2162240501727768 4 Y{I|L}{I|L}{I|L} 4 5 22.735 0.0 0.0 2.018 0.0 0.0 244.1817577130874 377.1213472955688 621.3031050086562 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 Y{I|L}{I|L}{I|L} 2.018 - 120 + 1 1.466 73306.1 1.0 13086 5067 18137 HBL1_DMSO_200M_050219_2,18155 HBL1_DMSO_200M_050219_2,18155,YLLDQHILI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18156 97.122 800.0 98414.0 25 0 17279.0 + + 20206 LALRIISI 8 104 449.8076860675103 897.6008192018205 2 449.8077880740166 MULTI CID FTMS 0 0 0 18137 117481.1328125 0.0200580141583662 5 -0.71282958984375 19 Unmodified _LLARLLSL_ ENST00000487533.1_1_2:9411660-9411717:-|nuORF 61.357469665136826 0.1155423183535659 4 [{I|L}A]{I|L}R{I|L}{I|L}S{I|L} 8 -1 + 58.638 0.0 0.0 6.5327 6.5327 84.906 0.0 0.0 0.0 6.977437731477423 14.904630595263413 6.977437731477423 6.977437731477423 0 1.6549471895720984 1.6989700043360187 0.3494850021680094 0.0 [{I|L}A]{I|L}R{I|L}{I|L}S{I|L};{I|L}A{I|L}[{I|L}T][RV]{I|L};{I|L}{I|L}AR{I|L}{I|L}S{I|L};{I|L}{I|L}[K{I|L}][W{I|L}]{I|L} 6.5327;5.7554;4.5385;0.42654 -;-;+;- + 109 1 1.466 65325.7 0.449999988079071 13087 5067 18137 HBL1_DMSO_200M_050219_2,18156 HBL1_DMSO_200M_050219_2,18156,LLARLLSL False False LALRIISI 97.121874 449.807788074017 173994912.0 18137.0 ENST00000487533.1_1_2:9411660-9411717:-|nuORF 3.688932915528616 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18157 97.136 800.0 116490.0 25 0 12221.0 -1 0 87 1136.630786120892 0 1136.630786120892 PEAK CID FTMS 0 0 0 -1 0 20 4 K 1 -1 3.0989 0.0 0.0 0.13644 0.0 0.0 1620.9109455613986 519.2326143854124 2140.143559946811 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.13644 - 3 + 1 1.466 62059.1 0.3799999952316284 13088 5067 18137 HBL1_DMSO_200M_050219_2,18157 HBL1_DMSO_200M_050219_2,18157, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18159 97.14 12.0 5528700.0 25 0 1386500.0 + -1 IIEWICLL 8 61 530.296637325188 1058.578721717176 2 530.2974120974541 MULTI CID FTMS 0 0 0 18158 4633579.0 0.9837874758038267 1 -0.14593505859375 1 Carbamidomethyl (C) _IIEWIC(Carbamidomethyl (C))LL_ REV__ENST00000456324.5_1_19:36727152-36727236:+|nuORF 20.871210003555333 0.6025813472596342 4 DM{I|L}{I|L}{I|L} 5 -1 45.701 0.0 0.0 4.3172 0.0 0.0 455.2503834455094 0.0 455.2503834455094 0.0 22.05591267411002 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 DM{I|L}{I|L}{I|L} 4.3172 - 73 1 1.466 59851.0 1.0 13089 5068 18158 HBL1_DMSO_200M_050219_2,18159 HBL1_DMSO_200M_050219_2,18159,IIEWICLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18160 97.143 112.0 1364000.0 25 0 515210.0 -1 0 64 326.17111147369275 650.3276700141855 2 326.1710693240166 MULTI CID FTMS 0 0 0 18158 672654.3125 0.086757191053226 3 -0.46282958984375 2 4 G 1 -1 11.594 0.0 0.0 1.7828 0.0 0.0 575.2948158655512 0.0 575.2948158655512 0.0 9.119543704721591 0.0 0.0 0 0.0 0.0 0.0 0.0 G 1.7828 - 13 + 1 1.466 128402.2 1.0 13090 5068 18158 HBL1_DMSO_200M_050219_2,18160 HBL1_DMSO_200M_050219_2,18160, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18161 97.148 279.0 607860.0 25 0 57283.0 + 17431 KNATTTVQF 9 103 1009.5351064669438 1008.5278300003438 1 1011.541552722454 MULTI CID FTMS 0 0 0 18158 430795.28125 0.981354375847267 -1 0.1348724365234375 3 Unmodified _KNATTTVQF_ REV__ENSG00000060237|ENST00000315939|WNK1;REV__nc|ENSG00000060237|Q9H4A3-2|WNK1;REV__nc|ENSG00000060237|Q9H4A3-4|WNK1;REV__nc|ENSG00000060237|Q9H4A3-5|WNK1;REV__nc|ENSG00000060237|Q9H4A3-6|WNK1;REV__nc|ENSG00000060237|Q9H4A3-7|WNK1 11.640296217721598 0.521594087909532 4 [PG]AS{I|L}YKY 8 -1 24.937 0.0 0.0 2.4726 0.0 0.0 0.0 126.0644893877882 126.0644893877882 6.727664157052406 0.0 0.0 0.0 0 0.0 0.0 1.341129063296272 0.0 [PG]AS{I|L}YKY 2.4726 - 2404 1 1.466 112294.2 1.0 13091 5068 18158 HBL1_DMSO_200M_050219_2,18161 HBL1_DMSO_200M_050219_2,18161,KNATTTVQF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18162 97.151 141.0 681820.0 25 0 77761.0 + 15450 IPPVILRL 8 86 460.8180927148848 919.6216324965696 2 460.8181945681572 MULTI CID FTMS 0 0 0 18158 416760.0 1.0 0 0.0 4 Unmodified _IPPVILRL_ ENST00000495369.1_1_2:128262943-128263081:-|nuORF 28.486842064014134 0.4448922141344407 4 {I|L}PPV{I|L}{I|L}R{I|L} 8 0 + 60.642 0.0 0.0 6.5942 6.5942 90.909 0.0 0.0 0.0 32.277069965251854 4.456319990099118 4.456319990099118 15.740312677277188 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}PPV{I|L}{I|L}R{I|L};{I|L}P{I|L}[VP]{I|L}R{I|L};{I|L}{I|L}[KA]{I|L}{I|L}H{I|L};{I|L}{I|L}P[VP]{I|L}R{I|L} 6.5942;4.8826;3.4923;1.9186 +;-;-;- + 255 + 1 1.466 79338.0 1.0 13092 5068 18158 HBL1_DMSO_200M_050219_2,18162 HBL1_DMSO_200M_050219_2,18162,IPPVILRL False True IPPVILRL 97.150582 460.818194568157 23540818.5 18158.0 ENST00000495369.1_1_2:128262943-128263081:-|nuORF 2.679685811201731 2.0 True 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18163 97.154 172.0 554840.0 25 0 67867.0 + 25668 NGFPVFATV 9 91 951.4929851406948 950.4857086740948 1 951.4940673708916 MULTI CID FTMS 0 0 0 18158 407806.875 0.1507312820351706 3 -0.46282958984375 5 Unmodified _NGFPVFATV_ ENSG00000073111|ENST00000265056|MCM2;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENST00000477668.5_1_3:127323572-127337961:+|nuORF 136.33342141710068 0.015683453262119 4 [VP]{M(Oxidation (M))|F}GN{M(Oxidation (M))|F}ATV 9 4 + 73.004 0.0 0.0 7.6807 7.6807 80.434 0.0 0.0 0.0 1.6281950349953431 16.478174818886366 1.6281950349953431 1.6281950349953431 0 0.6989700043360187 1.5228787452803376 0.3494850021680094 1.6989700043360187 [VP]{M(Oxidation (M))|F}GN{M(Oxidation (M))|F}ATV;[NG]{M(Oxidation (M))|F}PV{M(Oxidation (M))|F}ATV;[VP]{M(Oxidation (M))|F}GNA{M(Oxidation (M))|F}TV;[NG]{M(Oxidation (M))|F}PVA{M(Oxidation (M))|F}TV;[VP]{M(Oxidation (M))|F}A[NG]{M(Oxidation (M))|F}TV;[VP]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}TV;[VP]{M(Oxidation (M))|F}GGG{M(Oxidation (M))|F}ATV;{[TV]|[{I|L}S]}[WQ]{M(Oxidation (M))|F}ATV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[Q{I|L}]{M(Oxidation (M))|F}ATV;[NG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}[VP]ATV 7.6807;7.5094;7.2116;7.0403;6.295;5.1948;4.9244;4.6332;4.5627;4.5113 -;+;-;-;-;-;-;-;-;- + 1158 1 1.466 67241.1 1.0 13093 5068 18158 HBL1_DMSO_200M_050219_2,18163 HBL1_DMSO_200M_050219_2,18163,NGFPVFATV True True NGFPVFATV 97.153961 951.494067370892 30293072.25 18158.0 ENST00000477668.5_1_3:127323572-127337961:+|nuORF;;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2 8.329435507456461 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18164 97.157 143.0 591580.0 25 0 48626.0 + 9882 FPFPKPALI 9 107 515.3096516245355 1028.604750315871 2 515.3105346560478 MULTI CID FTMS 0 0 0 18158 363023.46875 0.9804547138710688 1 -0.14593505859375 6 Unmodified _FPFPKPALI_ ENSG00000172888|ENST00000339296|ZNF621;ENSG00000182983|ENST00000440367|ZNF662;ENST00000490457.5_1_3:40567331-40615968:+|nuORF;nc|ENSG00000172888|Q6ZSS3-2|ZNF621;nc|ENSG00000182983|Q6ZS27-3|ZNF662 44.40701690623563 0.0526327925666318 4 {M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK[{I|L}P]A{I|L} 9 2 + 48.043 0.0 0.0 4.6707 4.6707 51.2 0.0 0.0 0.0 22.30856540366808 7.113037394097432 7.113037394097432 0.0 0 0.7742275032520141 0.0 0.0 0.0 {M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK[{I|L}P]A{I|L};{M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK[PA]{I|L}{I|L};{M(Oxidation (M))|F}P{M(Oxidation (M))|F}PK[{I|L}P]{I|L}A;{M(Oxidation (M))|F}P{M(Oxidation (M))|F}PKVV[VP] 4.6707;4.6707;3.7927;3.4331 -;+;-;- + 482 + 1 1.466 73372.2 1.0 13094 5068 18158 HBL1_DMSO_200M_050219_2,18164 HBL1_DMSO_200M_050219_2,18164,FPFPKPALI True True FPFPKPALI 97.156834 515.310534656048 13339404.0 18158.0 nc|ENSG00000172888|Q6ZSS3-2|ZNF621;;ENST00000490457.5_1_3:40567331-40615968:+|nuORF;;ENSG00000182983|ENST00000440367|ZNF662;;nc|ENSG00000182983|Q6ZS27-3|ZNF662;;ENSG00000172888|ENST00000339296|ZNF621 5.622448921203613 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18165 97.163 326.0 448550.0 25 0 23738.0 -1 0 106 791.3727088192045 2371.096297057813 3 791.7080566287041 MULTI CID FTMS 0 0 0 18158 332869.0625 0.6850818388974179 6 -0.6799850463867188 7 4 {[HG]|PP}APPGDCNQVGM 13 -1 50.757 0.0 0.0 2.1407 0.0 0.0 0.0 1104.546881679895 1104.546881679895 18.46259612765916 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.110924374808178 0.4247425010840047 {[HG]|PP}APPGDCNQVGM 2.1407 - 30372 1 1.466 105643.2 1.0 13095 5068 18158 HBL1_DMSO_200M_050219_2,18165 HBL1_DMSO_200M_050219_2,18165, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18166 97.172 515.0 576870.0 25 0 34439.0 + -1 LMMILHHL 8 159 520.2760520850653 1038.5375512369303 2 520.2758666872978 MULTI CID FTMS 0 0 0 18158 319335.125 0.1629697783768046 -1 0.1348724365234375 8 2 Oxidation (M) _LM(Oxidation (M))M(Oxidation (M))ILHHL_ REV__ENSG00000119913|ENST00000646139|TECTB 24.20995872069341 0.5349487244130675 4 {I|L}{M(Oxidation (M))|F}W{I|L}NHP{I|L} 8 -1 + 33.228 0.0 0.0 3.1995 3.1995 65.403 0.0 0.0 0.0 20.392010216284724 7.555263781541086 7.555263781541086 1.9629464514396733 0 0.0 0.0 0.0 0.2396518287104437 {I|L}{M(Oxidation (M))|F}W{I|L}NHP{I|L};{I|L}{M(Oxidation (M))|F}W{I|L}NPH{I|L};{I|L}{M(Oxidation (M))|F}W{I|L}[WK]{M(Oxidation (M))|F};{I|L}{M(Oxidation (M))|F}W{I|L}GGHP{I|L};{I|L}{M(Oxidation (M))|F}W{I|L}GGPH{I|L};{I|L}{M(Oxidation (M))|F}W{I|L}[HQ]PV;{I|L}MD[WK]HP{I|L};{I|L}MD[WK]PH{I|L};{I|L}{M(Oxidation (M))|F}{[DA]|[EG]}{I|L}[YQ]G{I|L};{I|L}[WR]{[MS]|[{M(Oxidation (M))|F}A]}HP{I|L} 3.1995;3.0105;2.1703;2.0769;1.8879;1.861;1.6143;1.4253;0.8804;0.53485 -;-;-;-;-;-;-;-;-;- 1002 + 1 1.466 226145.5 1.0 13096 5068 18158 HBL1_DMSO_200M_050219_2,18166 HBL1_DMSO_200M_050219_2,18166,LMMILHHL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18167 97.176 244.0 165210.0 25 0 9709.3 + -1 LQKQLECQIGL 11 89 665.3651611208916 0 665.3651611208916 PEAK CID FTMS 0 0 0 -1 0 9 Carbamidomethyl (C) _LQKQLEC(Carbamidomethyl (C))QIGL_ REV__ENSG00000009694|ENST00000371130|TENM1;REV__nc|ENSG00000009694|Q9UKZ4-2|TENM1 20.41453444215458 0.3478569044516306 4 A{I|L}GANAA{I|L}MSA 11 -1 85.106 0.0 0.0 6.4051 0.0 0.0 188.1203403302748 167.0830019586547 355.20334228892955 0.0 0.0 0.0 0.0 0 0.5 0.0 3.885151878060192 0.0 A{I|L}GANAA{I|L}MSA 6.4051 - 6135 + 1 1.466 37033.6 1.0 13097 5068 18158 HBL1_DMSO_200M_050219_2,18167 HBL1_DMSO_200M_050219_2,18167,LQKQLECQIGL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18168 97.186 517.0 527110.0 25 0 69127.0 + 19552 LFQQVYEL 8 139 347.1868832188844 1038.5388202568531 3 347.1864501833916 MULTI CID FTMS 0 0 0 18158 208880.90625 0.0945016229388936 -1 0.1348724365234375 10 Unmodified _LFQQVYEL_ REV__ENSG00000083097|ENST00000349129|DOP1A 19.256988751693697 0.6264283240490721 4 {I|L}{M(Oxidation (M))|F}QK 4 -1 35.037 0.0 0.0 3.3737 0.0 0.0 0.0 519.2144259088499 519.2144259088499 10.735835408232486 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.3054621874040891 {I|L}{M(Oxidation (M))|F}QK 3.3737 - 240 + 1 1.466 217396.9 1.0 13098 5068 18158 HBL1_DMSO_200M_050219_2,18168 HBL1_DMSO_200M_050219_2,18168,LFQQVYEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18169 97.19 249.0 249360.0 25 0 55092.0 + -1 AQMEVASFLL 10 76 562.7865705998125 1123.558588266425 2 562.7873412966728 MULTI CID FTMS 0 0 0 18158 209043.171875 0.657568591777588 -1 0.1348724365234375 11 Oxidation (M) _AQM(Oxidation (M))EVASFLL_ ENST00000488829.1_1_9:89626569-89628063:+|nuORF;ENSG00000117399|ENST00000310955|CDC20 36.506200033944 0.1944608063770638 4 [{M(Oxidation (M))|F}E]VQAASE 8 -1 42.133 0.0 0.0 3.7499 0.0 0.0 0.0 259.16285716599447 259.16285716599447 22.686143099099848 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.7742275032520141 [{M(Oxidation (M))|F}E]VQAASE 3.7499 - 1133 1 1.466 54253.6 1.0 13099 5068 18158 HBL1_DMSO_200M_050219_2,18169 HBL1_DMSO_200M_050219_2,18169,AQMEVASFLL False False AQMEVASFLL 97.190188 562.787341296673 3702213.75 18158.0 ENST00000488829.1_1_9:89626569-89628063:+|nuORF;;ENSG00000117399|ENST00000310955|CDC20 5.113173325856526 2.0 True 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18170 97.194 194.0 504610.0 25 0 61021.0 16002 ITDTFTEKP 9 110 526.269899346278 1050.5252457593558 2 526.2689697146416 MULTI CID FTMS 0 0 0 18158 198502.9375 0.549873678952797 -1 0.1348724365234375 12 Unmodified _ITDTFTEKP_ ENST00000369483.5_1_1:117209256-117209388:-|nuORF 23.1484247019978 0.2366544122328345 4 {[QN]|[E{I|L}]|[KN]}CT{I|L} 5 7 22.981 0.0 0.0 2.1876 0.0 0.0 0.0 488.2396371990621 488.2396371990621 4.464402447624213 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.4476212463643422 0.0 {[QN]|[E{I|L}]|[KN]}CT{I|L} 2.1876 - 423 1 1.466 81306.8 1.0 13100 5068 18158 HBL1_DMSO_200M_050219_2,18170 HBL1_DMSO_200M_050219_2,18170,ITDTFTEKP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18171 97.201 306.0 437170.0 25 0 109360.0 + 28877 QALSPLLSV 9 129 464.2807550486296 926.5469571640592 2 464.2794067263603 MULTI CID FTMS 0 0 0 18158 186268.03125 1.0 0 0.0 13 Unmodified _QALSPLLSV_ nc|ENSG00000204179|Q4JDL3-13|PTPN20;nc|ENSG00000204179|Q4JDL3-15|PTPN20 30.63653989081413 0.1413794767160703 4 {[TV]|[{I|L}S]}P{I|L}C(Carbamidomethyl (C))M{I|L} 7 5 31.201 0.0 0.0 3.3674 0.0 0.0 0.0 109.11960084355316 109.11960084355316 14.1666951781037 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.5451140161145328 0.0 {[TV]|[{I|L}S]}P{I|L}C(Carbamidomethyl (C))M{I|L} 3.3674 - 1899 1 1.466 109044.4 1.0 13101 5068 18158 HBL1_DMSO_200M_050219_2,18171 HBL1_DMSO_200M_050219_2,18171,QALSPLLSV False True False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 18172 97.209 453.0 619330.0 25 0 148990.0 + 31679 RRKRKMQRWRL 11 94 807.4930116253076 1612.9714703174152 2 807.4949828982353 MULTI CID FTMS 0 0 0 18158 177173.265625 0.2642805467830464 -1 0.1348724365234375 14 Unmodified _RRKRKMQRWRL_ REV__ENST00000229214.8_1_12:75893569-75893638:-|nuORF 0.0 0.8751479354844584 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 39.887 0.0 0.0 2.4729 0.0 0.0 0.0 572.3584081438402 572.3584081438402 24.09002282971131 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.4729 - 217 1 1.466 190797.3 1.0 13102 5068 18158 HBL1_DMSO_200M_050219_2,18172 HBL1_DMSO_200M_050219_2,18172,RRKRKMQRWRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18173 97.223 800.0 187040.0 25 0 6510.5 -1 0 145 1096.2049573168306 3285.593042550692 3 1096.540087878704 MULTI CID FTMS 0 0 0 18158 157557.46875 1.0 0 0.0 15 4 GVN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5 -1 17.447 0.0 0.0 0.53102 0.0 0.0 2753.302911629721 0.0 2753.302911629721 0.0 3.494850021680092 0.0 0.0 0 0.0 0.0 0.0 0.0 GVN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 0.53102 - 332 1 1.466 94936.6 0.6000000238418579 13103 5068 18158 HBL1_DMSO_200M_050219_2,18173 HBL1_DMSO_200M_050219_2,18173, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18174 97.229 351.0 246960.0 25 0 34811.0 + + -1 AQAENLQALFV 11 107 601.2772920853854 1200.5400312375707 2 602.3203613162041 MULTI CID FTMS 0 0 0 -1 0 16 Carbamidomethyl (C) _QNELAAPC(Carbamidomethyl (C))DAI_ ENSG00000198793|ENST00000361445|MTOR 12.240655878213236 0.7805268987462184 4 {[{M(Oxidation (M))|F}D]|MM}{I|L}AGAA[YQ]{M(Oxidation (M))|F}V 11 -1 + 66.77 0.0 0.0 5.5617 5.5617 78.15 0.0 0.0 0.0 25.76152952724935 2.2962885754195668 2.2962885754195668 4.370674166737267 0 0.0 0.0 0.0 2.6549471895720984 {[{M(Oxidation (M))|F}D]|MM}{I|L}AGAA[YQ]{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}W[TP]AGA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[{M(Oxidation (M))|F}D]|MM}{I|L}QAA[YQ]{M(Oxidation (M))|F}V;{[{M(Oxidation (M))|F}D]|MM}{I|L}AQA[YQ]{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}W[TP]AQ{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QN]|[E{I|L}]|[KN]}W[TP]QA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[{M(Oxidation (M))|F}D]|MM}{I|L}AQAEA[HT]V;{[{M(Oxidation (M))|F}D]|MM}{I|L}AQAEA[HS]{I|L};{[{M(Oxidation (M))|F}D]|MM}{I|L}AQA[HA]SE{I|L};{[{M(Oxidation (M))|F}D]|MM}{I|L}QAAEA[HT]V 5.5617;5.1976;4.6968;4.6602;4.3328;4.2961;4.0662;4.0662;3.7778;3.7491 -;-;-;-;-;-;-;-;-;- 1826 + 1 1.466 70246.5 1.0 13104 5068 18158 HBL1_DMSO_200M_050219_2,18174 HBL1_DMSO_200M_050219_2,18174,QNELAAPCDAI False False AQAENLQALFV 97.228975 602.320361316204 1852091.125 18158.0 ENSG00000198793|ENST00000361445|MTOR 5.779690583546956 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18175 97.239 586.0 214140.0 25 0 19631.0 + + 20668 TLLPDLIQKV 10 133 570.3526768850687 0 570.3550903201103 PEAK CID FTMS 0 0 0 18158 129784.046875 1.0 0 0.0 17 Unmodified _LLQRMGLLPV_ nc|ENSG00000141279|P55786-2|NPEPPS;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;ENSG00000141279|ENST00000322157|NPEPPS 26.88365393820708 0.2428278298207118 4 VKQ{I|L}D 5 -1 27.779 0.0 0.0 2.4396 0.0 0.0 345.2230178449443 207.1142977350219 552.3373155799662 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.2742275032520141 VKQ{I|L}D 2.4396 - 700 + 1 1.466 97804.7 1.0 13105 5068 18158 HBL1_DMSO_200M_050219_2,18175 HBL1_DMSO_200M_050219_2,18175,LLQRMGLLPV False False TLLPDLIQKV 97.239248 570.35509032011 1340162.5 18158.0 nc|ENSG00000141279|P55786-2|NPEPPS;;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;;ENSG00000141279|ENST00000322157|NPEPPS 6.18872054417928 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18176 97.254 800.0 222560.0 25 0 15963.0 -1 0 136 687.8335841134808 2747.305230587523 4 688.3336669802666 MULTI CID FTMS 0 0 0 18158 109422.2890625 0.4587011673091603 -1 0.1348724365234375 18 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 72.731 0.0 0.0 2.6473 0.0 0.0 0.0 1706.6850883358231 1706.6850883358231 44.94219050288216 0.0 0.0 0.0 0 1.924742501084005 1.5228787452803376 0.2302046884880938 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.6473 - 1667 1 1.466 131687.1 0.5099999904632568 13106 5068 18158 HBL1_DMSO_200M_050219_2,18176 HBL1_DMSO_200M_050219_2,18176, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18177 97.268 800.0 177600.0 25 0 17207.0 + -1 CSYDCCDCK 9 142 577.1764409262836 0 577.2368652224541 PEAK CID FTMS 0 0 0 18158 34670.5234375 1.0 0 0.0 19 2 Carbamidomethyl (C) _CSYDC(Carbamidomethyl (C))C(Carbamidomethyl (C))DCK_ REV__ENSG00000172273|ENST00000350777|HINFP;REV__ENST00000527755.5_1_11:119003111-119005205:+|nuORF;REV__nc|ENSG00000172273|Q9BQA5-2|HINFP 1.844237919475145 0.3444685223463735 4 VND{I|L}{M(Oxidation (M))|F}{I|L}PS 8 -1 28.92 0.0 0.0 2.5097 0.0 0.0 147.80867911643583 116.05114160709218 263.859820723528 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 VND{I|L}{M(Oxidation (M))|F}{I|L}PS 2.5097 - 535 + 1 1.466 108029.9 0.5699999928474426 13107 5068 18158 HBL1_DMSO_200M_050219_2,18177 HBL1_DMSO_200M_050219_2,18177,CSYDCCDCK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18178 97.282 800.0 69984.0 25 0 4349.3 -1 0 94 797.709984475537 0 797.7089111208916 PEAK CID FTMS 0 0 0 18158 87664.5859375 0.6573848880296439 -1 0.1348724365234375 20 4 PP 2 -1 6.4537 0.0 0.0 0.40502 0.0 0.0 842.9991560193899 553.2787427199356 1396.2778987393256 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.40502 - 271 + 1 1.466 54868.3 0.6200000047683716 13108 5068 18158 HBL1_DMSO_200M_050219_2,18178 HBL1_DMSO_200M_050219_2,18178, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18180 97.286 0.6 114390000.0 25 0 17026000.0 + 4029 DALRSILTI 9 71 501.3032265673282 1000.5919002014564 2 501.3038207888603 MULTI CID FTMS 0 0 0 18179 107576224.0 1.0 0 0.0 1 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 40.23920728925047 0.0741434193262949 4 {[DA]|[EG]}[R{I|L}]S{I|L}{I|L}T{I|L} 9 0 + 63.86 0.0 0.0 6.3823 6.3823 92.595 0.0 0.0 0.0 13.911962188136542 35.03108253432609 13.911962188136542 63.86046240493748 0 1.25 1.5228787452803376 0.4247425010840047 0.0 + + {[DA]|[EG]}[R{I|L}]S{I|L}{I|L}T{I|L} 6.3823 + + 89 1 1.454 57138.4 1.0 13109 5069 18179 HBL1_DMSO_200M_050219_2,18180 HBL1_DMSO_200M_050219_2,18180,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18181 97.291 242.0 546070.0 25 0 129920.0 -1 0 69 1168.1755756604775 3501.5048975816326 3 1168.510302722454 MULTI CID FTMS 0 0 0 18179 563505.0 0.3587311914480771 1 -0.1616897583007812 2 4 {M(Oxidation (M))|F}C(Carbamidomethyl (C)) 2 -1 7.9588 0.0 0.0 0.2273 0.0 0.0 1473.5252355716705 1717.8676241510375 3191.392859722708 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C)) 0.2273 - 51 + 1 1.454 109139.6 1.0 13110 5069 18179 HBL1_DMSO_200M_050219_2,18181 HBL1_DMSO_200M_050219_2,18181, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18182 97.292 35.0 2610700.0 25 0 369730.0 + 40749 VLIPKLPQL 9 71 510.84396369341687 1019.6733744536338 2 510.8442260622978 MULTI CID FTMS 0 0 0 18179 2094028.75 0.8143150062798419 -1 0.14593505859375 3 Unmodified _VLIPKLPQL_ ENSG00000172057|ENST00000304046|ORMDL3;nc|ENSG00000172057|Q8N138-4|ORMDL3 57.47134341890925 0.0274820932774257 4 [{I|L}V]{I|L}PK{I|L}PQ{I|L} 9 0 + 75.474 0.0 0.0 7.4018 7.4018 93.574 0.0 0.0 0.0 52.46346126099348 14.973024840566469 14.973024840566469 16.267959391884546 0 0.805462187404089 1.6989700043360187 0.0 1.086696871556164 + + [{I|L}V]{I|L}PK{I|L}PQ{I|L};[{I|L}V]{I|L}PK{I|L}P[AG]{I|L};[{I|L}V]{I|L}{I|L}[KP]PQ{I|L};[{I|L}V]{I|L}{I|L}[KP]P[AG]{I|L} 7.4018;5.8064;5.7631;4.1677 +;-;-;- + 273 + 1 1.454 76163.7 1.0 13111 5069 18179 HBL1_DMSO_200M_050219_2,18182 HBL1_DMSO_200M_050219_2,18182,VLIPKLPQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18183 97.293 54.0 1177400.0 25 0 385780.0 + 17774 KQFGNILIL 9 67 523.3237739460511 1044.632994958902 2 523.3241454958916 MULTI CID FTMS 0 0 0 18179 1006398.875 0.909836042416723 -1 0.14593505859375 4 Unmodified _KQFGNILIL_ ENSG00000102172|ENST00000404933|SMS;ENST00000436365.1_1_X:47577979-47578291:-|nuORF;nc|ENSG00000102172|P52788-2|SMS 48.345845343767074 0.0439967357579942 4 [KQ]{M(Oxidation (M))|F}[NG]{I|L}{I|L}{I|L}{I|L} 9 0 + 52.202 0.0 0.0 4.9971 4.9971 79.761 0.0 0.0 0.0 3.2568864632742844 26.21060219063025 3.2568864632742844 8.36696871556164 0 0.9247425010840048 0.0 0.0 1.1861818737241734 + + [KQ]{M(Oxidation (M))|F}[NG]{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}[NG]{M(Oxidation (M))|F}[KQ]{I|L}{I|L};[KQ]{M(Oxidation (M))|F}{I|L}[NG]{I|L}{I|L}{I|L} 4.9971;4.1962;3.8237 +;-;- + 115 1 1.454 53355.5 1.0 13112 5069 18179 HBL1_DMSO_200M_050219_2,18183 HBL1_DMSO_200M_050219_2,18183,KQFGNILIL True True KQFGNILIL 97.293298 523.324145495892 19870550.0 18179.0 nc|ENSG00000102172|P52788-2|SMS;;ENST00000436365.1_1_X:47577979-47578291:-|nuORF;;ENSG00000102172|ENST00000404933|SMS 2.771027167638143 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18184 97.295 67.0 948480.0 25 0 160820.0 20320 LLESYIECTM 10 91 601.2772920853854 1200.5400312375707 2 601.2779418826103 MULTI CID FTMS 0 0 0 18179 713996.0 0.2286278585246728 -1 0.14593505859375 5 Unmodified _LLESYIECTM_ ENSG00000186141|ENST00000334163|POLR3C 25.399314129420983 0.3980215340001851 4 YE{I|L}E{I|L}[{I|L}A]E 8 7 37.551 0.0 0.0 3.1278 0.0 0.0 222.0137043683609 0.0 222.0137043683609 0.0 4.714672415332792 0.0 0.0 0 0.0 0.0 0.958170666312956 0.0 YE{I|L}E{I|L}[{I|L}A]E 3.1278 - 270 1 1.454 48699.8 1.0 13113 5069 18179 HBL1_DMSO_200M_050219_2,18184 HBL1_DMSO_200M_050219_2,18184,LLESYIECTM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18185 97.296 66.0 770900.0 25 0 130250.0 + 26249 NQLDSLMGL 9 78 495.7503762384249 989.4861995436496 2 495.7504760622978 MULTI CID FTMS 0 0 0 18179 516041.78125 0.550965375870965 1 -0.1616897583007812 6 Unmodified _NQLDSLMGL_ ENSG00000135148|ENST00000412615|TRAFD1 29.081581746732265 0.1611639662936252 4 {[QN]|[E{I|L}]|[KN]}{I|L}DS{I|L} 6 3 41.024 0.0 0.0 4.1459 0.0 0.0 0.0 316.1343068036685 316.1343068036685 17.836003313407076 0.0 0.0 0.0 0 0.4247425010840047 0.7958800173440752 0.3054621874040891 0.1861818737241735 + {[QN]|[E{I|L}]|[KN]}{I|L}DS{I|L} 4.1459 + + 178 1 1.454 44917.8 1.0 13114 5069 18179 HBL1_DMSO_200M_050219_2,18185 HBL1_DMSO_200M_050219_2,18185,NQLDSLMGL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18186 97.299 122.0 382190.0 25 0 53093.0 + 27105 PFILKEKIL 9 71 550.855069351853 1099.695585770506 2 550.8557617068291 MULTI CID FTMS 0 0 0 18179 478291.375 1.0 0 0.0 7 Unmodified _PFILKEKIL_ REV__ENSG00000138413|ENST00000345146|IDH1;REV__ENST00000462386.5_1_2:209112975-209118617:-|nuORF;REV__ENST00000481557.1_1_2:209116152-209118617:-|nuORF 5.230669730166228 0.7320841359114558 4 {I|L} 1 -1 12.474 0.0 0.0 1.1343 0.0 0.0 968.6004452449184 0.0 968.6004452449184 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1343 + + 62 + 1 1.454 45612.7 1.0 13115 5069 18179 HBL1_DMSO_200M_050219_2,18186 HBL1_DMSO_200M_050219_2,18186,PFILKEKIL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18187 97.301 103.0 894650.0 25 0 75558.0 -1 0 90 505.327320716262 504.320044249662 1 505.3277465701103 MULTI CID FTMS 0 0 0 18179 423950.375 0.5584063075687236 1 -0.1616897583007812 8 4 [{I|L}P]VM 4 -1 23.645 0.0 0.0 4.6885 0.0 0.0 0.0 61.05042218423345 61.05042218423345 10.150312510170778 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P]VM 4.6885 - 99 1 1.454 78387.9 1.0 13116 5069 18179 HBL1_DMSO_200M_050219_2,18187 HBL1_DMSO_200M_050219_2,18187, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18188 97.313 691.0 292520.0 25 0 40868.0 + -1 FVDELRITL 9 168 554.2337318520603 1106.4529107709204 2 554.2336913943291 MULTI CID FTMS 0 0 0 18179 294960.90625 0.6019023400077887 -1 0.14593505859375 9 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))VQEC(Carbamidomethyl (C))PCVL_ nc|ENSG00000135317|Q9Y5W7-4|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;nc|ENSG00000135317|Q9Y5W7-3|SNX14;ENSG00000135317|ENST00000314673|SNX14 21.74664581756881 0.2544899275067181 4 {[QG]|[NA]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))GE{[QG]|[NA]}{I|L}V 10 -1 + 27.662 0.0 0.0 2.5 2.5 63.319 0.0 0.0 0.0 4.936362845548285 -2.76420984328891 -2.76420984328891 1.637867533881355 0 0.6677353201839438 0.5086383061657274 0.2887254899964357 0.9876954943324544 {[QG]|[NA]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))GE{[QG]|[NA]}{I|L}V;{[QG]|[NA]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))W{[QG]|[NA]}{I|L}V;{[QG]|[NA]}WD[CS]{[CP]|[EA]}{I|L}V;{[QG]|[NA]}WC(Carbamidomethyl (C))C(Carbamidomethyl (C)){[QG]|[NA]}{I|L}V;[AG]GC(Carbamidomethyl (C))C(Carbamidomethyl (C))GE{[QG]|[NA]}{I|L}V;{[QG]|[NA]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))GQW{I|L}V;[AG]GC(Carbamidomethyl (C))C(Carbamidomethyl (C))W{[QG]|[NA]}{I|L}V;{[QG]|[NA]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))W{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};[AG]GC(Carbamidomethyl (C))C(Carbamidomethyl (C))GQW{I|L}V;{[QG]|[NA]}C(Carbamidomethyl (C))C(Carbamidomethyl (C))GE{I|L}{[{M(Oxidation (M))|F}H]|[RQ]} 2.5;2.352;2.3486;2.0338;1.9671;1.8692;1.8151;1.638;1.5932;1.5202 -;-;-;-;-;-;-;-;-;- 781 1 1.454 161044.7 1.0 13117 5069 18179 HBL1_DMSO_200M_050219_2,18188 HBL1_DMSO_200M_050219_2,18188,CVQECPCVL False False FVDELRITL 97.313229 554.233691394329 1296119.75 18179.0 nc|ENSG00000135317|Q9Y5W7-4|SNX14;;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;;nc|ENSG00000135317|Q9Y5W7-3|SNX14;;ENSG00000135317|ENST00000314673|SNX14 -0.4220014611879985 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18189 97.319 337.0 624640.0 25 0 49058.0 + 25328 NAKALIIQPI 10 151 540.8418164944808 1079.6690800557617 2 540.8420898318291 MULTI CID FTMS 0 0 0 18179 268291.25 0.5904818695809317 -1 0.14593505859375 10 Unmodified _NAKALIIQPI_ REV__ENSG00000183091|ENST00000397345|NEB;REV__nc|ENSG00000183091|P20929-1|NEB;REV__nc|ENSG00000183091|P20929-3|NEB;REV__nc|ENSG00000183091|P20929-4|NEB 43.85829265575387 0.1168243637355526 4 [Q{I|L}][KQ]{I|L}{I|L}PQ{I|L} 9 -1 + 37.526 0.0 0.0 3.4757 3.4757 65.67 0.0 0.0 0.0 1.7609125905568137 2.6389183501672235 1.7609125905568137 1.7609125905568137 0 1.1237125054200234 0.0 0.0 0.7926740567922438 [Q{I|L}][KQ]{I|L}{I|L}PQ{I|L};{[QN]|[E{I|L}]|[KN]}[RV]{I|L}{I|L}PQ{I|L};[{I|L}V]{[RE]|[WV]}{I|L}{I|L}PQ{I|L};{I|L}{I|L}[RD]{I|L}{I|L}PQ{I|L};[{I|L}A]G[KQ]{I|L}{I|L}PQ{I|L};{[QN]|[E{I|L}]|[KN]}PKKKPQ{I|L};[{I|L}V]N{[VA]|[{I|L}G]}VKPQ{I|L};[{I|L}P]EKKKPQ{I|L};[{I|L}P]K{[SA]|[TG]}VKPQ{I|L};[KP]T{[VA]|[{I|L}G]}VKPQ{I|L} 3.4757;3.3126;3.215;3.0225;2.5794;1.859;1.7189;1.4317;1.1105;1.036 -;-;-;-;-;-;-;-;-;- 1238 1 1.454 166748.5 1.0 13118 5069 18179 HBL1_DMSO_200M_050219_2,18189 HBL1_DMSO_200M_050219_2,18189,NAKALIIQPI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18190 97.325 321.0 452840.0 25 0 28018.0 + 23280 LSWNKTVEL 9 133 545.3000667161175 1088.585580499035 2 545.3000366091728 MULTI CID FTMS 0 0 0 18179 268819.1875 0.9570793628471078 1 -0.1616897583007812 11 Unmodified _LSWNKTVEL_ ENSG00000196358|ENST00000393229|NTNG2;nc|ENSG00000196358|Q96CW9-2|NTNG2 45.69961567697781 0.0497987121815769 4 {NN|[MP]|[D{I|L}]|[EV]}T[VS]{I|L}TVE{I|L} 10 5 + 55.195 0.0 0.0 5.0703 5.0703 68.548 0.0 0.0 0.0 0.3375834318001551 6.914543788274798 0.3375834318001551 0.3375834318001551 0 0.5752574989159953 1.6989700043360187 0.8807196863200843 0.0 {NN|[MP]|[D{I|L}]|[EV]}T[VS]{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}S[W{I|L}]TVE{I|L};{[QN]|[E{I|L}]|[KN]}VV{[MG]|[TS]}TVE{I|L};{[TV]|[{I|L}S]}[VP][MT]TVE{I|L};{[TV]|[{I|L}S]}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}[KG]VE{I|L};{[QN]|[E{I|L}]|[KN]}S[KS][KG]VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}V]{[MG]|[TS]}TVE{I|L};[{I|L}T]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}[KG]VE{I|L};[R{M(Oxidation (M))|F}][DP]{I|L}TVE{I|L};{[TV]|[{I|L}S]}[VP]{M(Oxidation (M))|F}WVE{I|L} 5.0703;5.0393;4.1934;3.9009;3.7134;3.6403;3.6244;3.5991;3.5937;3.5932 -;-;-;-;-;-;-;-;-;- 1772 1 1.454 117607.5 1.0 13119 5069 18179 HBL1_DMSO_200M_050219_2,18190 HBL1_DMSO_200M_050219_2,18190,LSWNKTVEL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18191 97.339 800.0 539590.0 25 0 28685.0 + 14836 ILFVEYEL 8 201 513.281096802227 1024.547640671254 2 513.2810546755791 MULTI CID FTMS 0 0 0 18179 254285.078125 1.0 0 0.0 12 Unmodified _ILFVEYEL_ REV__ENST00000503043.1_1_4:119234230-119239656:-|nuORF 15.768221252438446 0.6779680726941459 4 {I|L}D{I|L}N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L} 8 -1 26.082 0.0 0.0 2.5457 0.0 0.0 62.03282717031807 0.0 62.03282717031807 0.0 12.013790896610487 0.0 0.0 0 0.2887254899964357 0.0 1.187090444887947 0.0 {I|L}D{I|L}N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L} 2.5457 - 4834 + 1 1.454 324362.1 0.9700000286102296 13120 5069 18179 HBL1_DMSO_200M_050219_2,18191 HBL1_DMSO_200M_050219_2,18191,ILFVEYEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18192 97.353 780.0 129060.0 25 0 4117.3 -1 0 124 960.4742004895704 1918.9338480459403 2 960.0374633669852 MULTI CID FTMS 0 0 0 18179 67001.4140625 1.0 0 0.0 13 4 [{I|L}T]DVTEAVM 9 -1 51.894 0.0 0.0 2.7043 0.0 0.0 0.0 956.4458469075216 956.4458469075216 29.533167348488195 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.920818753952376 0.0 [{I|L}T]DVTEAVM 2.7043 - 74822 1 1.454 70044.3 1.0 13121 5069 18179 HBL1_DMSO_200M_050219_2,18192 HBL1_DMSO_200M_050219_2,18192, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18193 97.366 800.0 137320.0 25 0 12791.0 + 67 AAFDVSQFY 9 94 349.83242794438416 1046.4754544333523 3 349.8321716189384 MULTI CID FTMS 0 0 0 18179 208386.03125 1.0 0 0.0 14 Unmodified _AAFDVSQFY_ REV__ENSG00000164199|ENST00000405460|ADGRV1;REV__ENST00000509621.1_3_5:89989878-90055411:+|nuORF 13.90604991867851 0.4602628045680013 4 AA{I|L} 3 -1 40.632 0.0 0.0 3.8827 0.0 0.0 0.0 788.2950015489498 788.2950015489498 32.53257290683844 0.0 0.0 0.0 0 0.2215141619232908 1.5228787452803376 0.0 0.0 AA{I|L} 3.8827 - 69 + 1 1.454 93933.6 0.8199999928474426 13122 5069 18179 HBL1_DMSO_200M_050219_2,18193 HBL1_DMSO_200M_050219_2,18193,AAFDVSQFY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18194 97.373 293.0 155730.0 25 0 23057.0 -1 0 68 335.176514968012 668.3384770028239 2 335.1761962771416 MULTI CID FTMS 0 0 0 18179 210899.453125 1.0 0 0.0 15 4 W 1 -1 1.5938 0.0 0.0 0.23847 0.0 0.0 425.1317489528223 54.10879694156485 479.2405458943872 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.23847 - 6 + 1 1.454 44440.4 1.0 13123 5069 18179 HBL1_DMSO_200M_050219_2,18194 HBL1_DMSO_200M_050219_2,18194, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18195 97.387 800.0 158140.0 25 0 21108.0 + -1 VPPGLFNVV 9 102 941.0528442263604 0 941.0528442263604 PEAK CID FTMS 0 0 0 -1 0 16 nc|ENSG00000143149|P49189-2|ALDH9A1;ENST00000491436.1_1_1:165638124-165649867:-|nuORF;nc|ENSG00000143149|P49189|ALDH9A1;ENSG00000143149|ENST00000354775|ALDH9A1 4 VVN{M(Oxidation (M))|F}VAP 7 -1 19.531 0.0 0.0 1.0389 0.0 0.0 957.5526966540892 193.09894739322505 1150.6516440473144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6747425010840047 VVN{M(Oxidation (M))|F}VAP 1.0389 - 831 + 1 1.454 86762.8 0.7599999904632568 13124 5069 18179 HBL1_DMSO_200M_050219_2,18195 HBL1_DMSO_200M_050219_2,18195, False False VPPGLFNVV 97.387047 941.05284422636 898035.1875 18179.0 nc|ENSG00000143149|P49189-2|ALDH9A1;;ENST00000491436.1_1_1:165638124-165649867:-|nuORF;;nc|ENSG00000143149|P49189|ALDH9A1;;ENSG00000143149|ENST00000354775|ALDH9A1 7.657617410024007 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18196 97.401 800.0 277130.0 25 0 30816.0 + 28767 PWWTEVTI 8 186 516.2627051390498 0 516.2620117068291 PEAK CID FTMS 0 0 0 18179 163653.078125 1.0 0 0.0 17 Unmodified _PWWTEVTI_ REV__ENSG00000109323|ENST00000647097|MANBA;REV__ENST00000514430.5_1_4:103590092-103612100:-|nuORF 18.13498045792455 0.4501116112875982 4 {M(Oxidation (M))|F}PCEA 5 -1 10.547 0.0 0.0 1.0235 0.0 0.0 142.07296968103066 338.20969568424067 480.2826653652713 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 {M(Oxidation (M))|F}PCEA 1.0235 - 665 + 1 1.454 173566.8 0.8399999737739563 13125 5069 18179 HBL1_DMSO_200M_050219_2,18196 HBL1_DMSO_200M_050219_2,18196,PWWTEVTI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18197 97.416 800.0 412900.0 25 0 87559.0 7527 EICRSKSIKSL 11 86 632.3609353793588 1262.7073178255175 2 632.3618652224541 MULTI CID FTMS 0 0 0 18179 162178.0625 0.1078735925626328 4 -0.463409423828125 18 Unmodified _EICRSKSIKSL_ ENSG00000138346|ENST00000358410|DNA2;nc|ENSG00000138346|P51530-4|DNA2 9.38312468134398 0.8308777417566128 4 {[TV]|[{I|L}S]}C 3 9 16.171 0.0 0.0 1.2807 0.0 0.0 0.0 956.5582754273332 956.5582754273332 3.0719686320084385 0.0 0.0 0.0 0 0.0 1.0 0.5 0.0 {[TV]|[{I|L}S]}C 1.2807 - 47 1 1.454 239653.3 0.8299999833106995 13126 5069 18179 HBL1_DMSO_200M_050219_2,18197 HBL1_DMSO_200M_050219_2,18197,EICRSKSIKSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18198 97.43 800.0 307570.0 25 0 46133.0 + 31339 RMRKRIMWRRY 11 83 826.4670189412064 1650.9194849492128 2 826.4677612185478 MULTI CID FTMS 0 0 0 18179 154398.4375 0.805109616796665 -1 0.14593505859375 19 Unmodified _RMRKRIMWRRY_ REV__ENSG00000066279|ENST00000367409|ASPM 0.0 0.8751479354844584 4 M 1 -1 4.6041 0.0 0.0 0.27888 0.0 0.0 1074.558414247844 442.2972845193584 1516.8556987672025 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.27888 + + 13 + 1 1.454 166597.1 0.8100000023841858 13127 5069 18179 HBL1_DMSO_200M_050219_2,18198 HBL1_DMSO_200M_050219_2,18198,RMRKRIMWRRY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18199 97.444 800.0 227790.0 25 0 20938.0 + + 10092 FPFPKPDLI 9 173 536.8046084689572 1071.5946640047143 2 537.3057739138603 MULTI CID FTMS 0 0 0 18179 152628.28125 0.8674495745832083 -1 0.14593505859375 20 Unmodified _FPTKEQPLL_ nc|ENSG00000177873|Q8N2I2-4|ZNF619;ENST00000314686.9_1_3:40519470-40525181:+|nuORF;ENST00000494154.6_1_3:40523704-40529729:+|nuORF;nc|ENSG00000177873|Q8N2I2-2|ZNF619;ENSG00000177873|ENST00000432264|ZNF619 28.486842064014134 0.1687311288560894 4 {I|L}{I|L}{[ET]|[MV]}KP{M(Oxidation (M))|F}PQ 9 -1 + 34.724 0.0 0.0 3.2404 3.2404 62.764 0.0 0.0 0.0 3.4845464559211905 9.208187539523756 3.4845464559211905 0.5237875363565792 0 0.0 1.3010299956639813 0.0 0.0 {I|L}{I|L}{[ET]|[MV]}KP{M(Oxidation (M))|F}PQ;{I|L}{I|L}{[ET]|[MV]}KM{I|L}PQ;{[QN]|[E{I|L}]|[KN]}[{I|L}T]KP{M(Oxidation (M))|F}PQ;[KP]{M(Oxidation (M))|F}T{[QN]|[E{I|L}]|[KN]}{I|L}PQ;{[QN]|[E{I|L}]|[KN]}[{I|L}T]KM{I|L}PQ;[KP][KC]KP{M(Oxidation (M))|F}PQ;[KP][KC]KM{I|L}PQ;[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PQ;[{I|L}P][YV]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}PQ;[{I|L}T]{[QN]|[E{I|L}]|[KN]}KP{M(Oxidation (M))|F}PQ 3.2404;3.1915;2.9153;2.9056;2.8664;2.7188;2.2736;2.2217;2.2092;2.1945 -;-;-;-;-;-;-;-;-;- 1928 1 1.454 147338.2 0.7799999713897705 13128 5069 18179 HBL1_DMSO_200M_050219_2,18199 HBL1_DMSO_200M_050219_2,18199,FPTKEQPLL False False FPFPKPDLI 97.443581 537.30577391386 2866805.75 18179.0 nc|ENSG00000177873|Q8N2I2-4|ZNF619;;ENST00000314686.9_1_3:40519470-40525181:+|nuORF;;ENST00000494154.6_1_3:40523704-40529729:+|nuORF;;nc|ENSG00000177873|Q8N2I2-2|ZNF619;;ENSG00000177873|ENST00000432264|ZNF619 5.036760648091634 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18201 97.449 67.0 718880.0 25 0 135620.0 10094 FPTSPWVLL 9 71 530.296637325188 1058.578721717176 2 530.2971679568291 MULTI CID FTMS 0 0 0 18200 471116.125 0.1000259504422456 3 -0.3017196655273437 1 Unmodified _FPTSPWVLL_ ENST00000470882.5_1_1:161146557-161146803:-|nuORF 24.67388899826682 0.2172451872415813 4 {[QN]|[E{I|L}]|[KN]}E[QA]M{I|L}{I|L}{I|L} 9 7 + 54.332 0.0 0.0 5.1325 5.1325 86.025 0.0 0.0 0.0 18.89847460841977 29.89454989793387 18.89847460841977 23.09984838316907 0 0.5 1.5228787452803376 0.0 0.0 {[QN]|[E{I|L}]|[KN]}E[QA]M{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V][NP]{M(Oxidation (M))|F}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V]{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}{I|L};[K{I|L}]{[QS]|[NT]}[NP]{M(Oxidation (M))|F}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}G{[RE]|[WV]}[KT]{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}G[KT]{[RE]|[WV]}{I|L}{I|L};[K{I|L}]{[QS]|[NT]}{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}G{[RE]|[WV]}{I|L}[KT]{I|L} 5.1325;2.9503;2.666;1.8046;1.7779;1.6598;1.5202;0.73678 -;-;-;-;-;-;-;- 104 1 1.441 41790.2 1.0 13129 5070 18200 HBL1_DMSO_200M_050219_2,18201 HBL1_DMSO_200M_050219_2,18201,FPTSPWVLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18202 97.45 70.0 529950.0 25 0 83050.0 23246 LSTSFEISR 9 69 347.1868832188844 1038.5388202568531 3 347.1867553591728 MULTI CID FTMS 0 0 0 18200 480363.4375 0.2173253901432448 1 -0.1552047729492187 2 Unmodified _LSTSFEISR_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B;nc|ENSG00000138182|Q96Q89-5|KIF20B 5.731851221503515 0.7145881442174411 4 R 1 8 13.979 0.0 0.0 1.3461 0.0 0.0 864.426422040836 0.0 864.426422040836 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 1.3461 + + 31 + 1 1.441 36129.1 1.0 13130 5070 18200 HBL1_DMSO_200M_050219_2,18202 HBL1_DMSO_200M_050219_2,18202,LSTSFEISR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18203 97.452 68.0 781940.0 25 0 41218.0 + 8741 EVNYNIFYRVL 11 74 715.3749677730807 1428.7353826129613 2 715.3759643435478 MULTI CID FTMS 0 0 0 18200 1016886.375 1.0 0 0.0 3 Unmodified _EVNYNIFYRVL_ REV__ENSG00000145526|ENST00000382275|CDH18;REV__nc|ENSG00000145526|Q13634-2|CDH18 15.248480904072842 0.7179608125786238 4 [NP]{M(Oxidation (M))|F}AGPHH{I|L}VMP{I|L} 13 -1 + 65.954 0.0 0.0 4.6163 4.6163 68.309 0.0 0.0 0.0 18.609888310779496 43.95937920390334 18.609888310779496 1.1626133618125607 0 1.3979400086720375 1.3010299956639813 0.0 1.2302046884880935 [NP]{M(Oxidation (M))|F}AGPHH{I|L}VMP{I|L};[NP]{M(Oxidation (M))|F}D[Q{I|L}][KQ]VMP{I|L};[NP]{M(Oxidation (M))|F}AGPHH{I|L}VNN{I|L};[NP]{M(Oxidation (M))|F}D[Q{I|L}][KQ]VNN{I|L};[NP]{M(Oxidation (M))|F}AGP{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}{I|L}P{I|L};[NP]{M(Oxidation (M))|F}AGP{[QN]|[E{I|L}]|[KN]}D{I|L}{M(Oxidation (M))|F}P{I|L};[NP]{M(Oxidation (M))|F}AGP{[QN]|[E{I|L}]|[KN]}{I|L}D{M(Oxidation (M))|F}P{I|L};{[NV]|[RG]}EM[Q{I|L}][KQ]VNN{I|L};{[NV]|[RG]}E[Q{I|L}]M[KQ]VNN{I|L};{[NV]|[RG]}E[Q{I|L}]{[QN]|[E{I|L}]|[KN]}{I|L}MMP{I|L} 4.6163;4.5349;4.4431;4.3617;3.2481;3.1606;3.1052;2.9631;2.4551;2.0497 -;-;-;-;-;-;-;-;-;- 688 1 1.441 44443.2 1.0 13131 5070 18200 HBL1_DMSO_200M_050219_2,18203 HBL1_DMSO_200M_050219_2,18203,EVNYNIFYRVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18204 97.453 67.0 2586600.0 25 0 213670.0 -1 ILLCEKYT 8 97 520.2760520850653 1038.5375512369303 2 520.2765991091728 MULTI CID FTMS 0 0 0 18200 694072.9375 0.3542138147243049 1 -0.1552047729492187 4 Carbamidomethyl (C) _ILLC(Carbamidomethyl (C))EKYT_ ENSG00000170571|ENST00000303221|EMB;ENST00000505896.5_1_5:49695109-49707239:-|nuORF;nc|ENSG00000170571|Q6PCB8-2|EMB 12.531546534597751 0.7257836412119636 4 {I|L}T 2 -1 33.733 0.0 0.0 3.2482 0.0 0.0 0.0 821.4029635065061 821.4029635065061 22.764209843288903 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}T 3.2482 - 40 + 1 1.441 133196.0 1.0 13132 5070 18200 HBL1_DMSO_200M_050219_2,18204 HBL1_DMSO_200M_050219_2,18204,ILLCEKYT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18205 97.456 117.0 532630.0 25 0 100320.0 + + 3520 SQMATILNL 9 101 495.768554095255 989.52255525731 2 495.7688781619072 MULTI CID FTMS 0 0 0 18200 462072.46875 1.0 0 0.0 5 Unmodified _CSLISGALNL_ nc|ENSG00000103051|Q9H9E3|COG4;ENSG00000103051|ENST00000323786|COG4;nc|ENSG00000103051|Q9H9E3-3|COG4 46.020951573049366 0.1035046897853725 4 {[QS]|[NT]}MAT{I|L} 6 -1 35.741 0.0 0.0 3.612 0.0 0.0 0.0 355.1982504079538 355.1982504079538 6.558805804000507 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.0 0.1923877696554315 {[QS]|[NT]}MAT{I|L} 3.612 - 433 1 1.441 51583.9 1.0 13133 5070 18200 HBL1_DMSO_200M_050219_2,18205 HBL1_DMSO_200M_050219_2,18205,CSLISGALNL False False SQMATILNL 97.455868 495.768878161907 4330258.0 18200.0 nc|ENSG00000103051|Q9H9E3|COG4;;ENSG00000103051|ENST00000323786|COG4;;nc|ENSG00000103051|Q9H9E3-3|COG4 5.14240837097168 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18206 97.461 270.0 395330.0 25 0 74665.0 + 19547 LFQDPRSWF 9 93 598.2980622588273 1194.5815715844544 2 598.2982055544853 MULTI CID FTMS 0 0 0 18200 385908.15625 0.5354547423087459 1 -0.1552047729492187 6 Unmodified _LFQDPRSWF_ ENST00000451653.5_2_3:42590110-42590281:-|nuORF 53.832793166522166 0.0319663582346103 4 {I|L}{M(Oxidation (M))|F}QD{M(Oxidation (M))|F}{[MG]|[TS]}[QP]{I|L} 10 5 + 52.769 0.0 0.0 4.4174 4.4174 81.94 0.0 0.0 0.0 38.16524461703182 0.3123909389407586 0.3123909389407586 14.446151097929553 0 1.066901560044258 0.0 1.1861818737241734 0.805462187404089 {I|L}{M(Oxidation (M))|F}QD{M(Oxidation (M))|F}{[MG]|[TS]}[QP]{I|L};{I|L}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NG]{I|L}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[VA]|[{I|L}G]}{I|L}D{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[NG]D{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[VA]|[{I|L}G]}D{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.4174;3.2081;3.0607;2.9715;2.8241 -;-;-;-;- 321 + 1 1.441 85222.0 1.0 13134 5070 18200 HBL1_DMSO_200M_050219_2,18206 HBL1_DMSO_200M_050219_2,18206,LFQDPRSWF True True LFQDPRSWF 97.460859 598.298205554485 15329910.0 18200.0 ENST00000451653.5_2_3:42590110-42590281:-|nuORF 4.937696933746338 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18207 97.464 176.0 391940.0 25 0 43486.0 + 14206 IDKVDWIYI 9 98 582.8191125062525 1163.623672079305 2 582.8187744021416 MULTI CID FTMS 0 0 0 18200 376899.59375 0.3245252365677652 1 -0.1552047729492187 7 Unmodified _IDKVDWIYI_ REV__ENSG00000075702|ENST00000401500|WDR62;REV__ENST00000378860.8_1_19:36545867-36564559:+|nuORF;REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF;REV__nc|ENSG00000075702|O43379-2|WDR62;REV__nc|ENSG00000075702|O43379-3|WDR62;REV__nc|ENSG00000075702|O43379|WDR62 41.8396318013385 0.0653578398400075 4 {[QD]|[EN]|[WG]|[KD]|[RS]}WV{I|L}D{I|L}Y{I|L} 9 -1 + 54.019 0.0 0.0 4.6423 4.6423 66.87 0.0 0.0 0.0 0.3737673202475875 7.504311474114331 0.3737673202475875 0.3737673202475875 0 0.7742275032520141 0.0 1.5021934810768762 0.6694451763165201 {[QD]|[EN]|[WG]|[KD]|[RS]}WV{I|L}D{I|L}Y{I|L};[WD]KV{I|L}D{I|L}Y{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QG]|[NA]}V{I|L}D{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VW{I|L}D{I|L}Y{I|L};[{I|L}T]QW{I|L}D{I|L}Y{I|L};{[TV]|[{I|L}S]}AAW{I|L}D{I|L}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}WV{I|L}YV{[QN]|[E{I|L}]|[KN]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D{I|L}W[NP]{I|L};[WD]KV{I|L}YV{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QG]|[NA]}V{I|L}YV{[QN]|[E{I|L}]|[KN]} 4.6423;4.6102;4.3515;4.0564;3.941;3.8026;3.6789;3.6479;3.6468;3.3881 -;-;-;-;-;-;-;-;-;- 852 1 1.441 54636.1 1.0 13135 5070 18200 HBL1_DMSO_200M_050219_2,18207 HBL1_DMSO_200M_050219_2,18207,IDKVDWIYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18208 97.475 632.0 441260.0 25 0 19023.0 -1 0 131 791.3727088192045 2371.096297057813 3 791.7080566287041 MULTI CID FTMS 0 0 0 18200 360333.71875 0.7416071797239943 8 -0.495147705078125 8 4 APPPPPP{[QN]|[E{I|L}]|[KN]} 9 -1 48.513 0.0 0.0 2.046 0.0 0.0 1457.6299407119134 0.0 1457.6299407119134 0.0 -5.875401699827513 -5.875401699827513 0.0 0 0.5 0.0 0.1861818737241735 2.2115005783268 APPPPPP{[QN]|[E{I|L}]|[KN]} 2.046 - 64632 + 1 1.441 196242.1 1.0 13136 5070 18200 HBL1_DMSO_200M_050219_2,18208 HBL1_DMSO_200M_050219_2,18208, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18209 97.479 171.0 427210.0 25 0 57634.0 -1 0 81 948.445849861736 1894.877146790272 2 948.4484130740166 MULTI CID FTMS 0 0 0 18200 328492.65625 1.0 0 0.0 9 4 {I|L}{[QG]|[NA]} 3 -1 22.76 0.0 0.0 1.2011 0.0 0.0 1578.7016534814811 0.0 1578.7016534814811 0.0 2.6434623055484217 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.805462187404089 {I|L}{[QG]|[NA]} 1.2011 - 234 + 1 1.441 49785.9 1.0 13137 5070 18200 HBL1_DMSO_200M_050219_2,18209 HBL1_DMSO_200M_050219_2,18209, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18210 97.491 739.0 222210.0 25 0 30714.0 + 15451 IPPVILRL 8 107 460.8180927148848 919.6216324965696 2 460.8185302615166 MULTI CID FTMS 0 0 0 18200 302027.625 0.7247039663115462 2 -0.2703323364257812 10 Unmodified _IPPVILRL_ ENST00000495369.1_1_2:128262943-128263081:-|nuORF 46.92087301778293 0.1537303740847981 4 {I|L}PPV{I|L}[R{I|L}]{I|L} 8 0 + 73.008 0.0 0.0 7.9389 7.9389 95.662 0.0 0.0 0.0 56.97743773147742 6.994784489444967 6.994784489444967 22.557809497117844 0 0.805462187404089 2.0 0.0 0.3807196863200844 + + {I|L}PPV{I|L}[R{I|L}]{I|L};{I|L}P{I|L}[VP][R{I|L}]{I|L};{I|L}{I|L}P[VP][R{I|L}]{I|L} 7.9389;5.486;2.108 +;-;- + 115 + 1 1.441 130271.8 1.0 13138 5070 18200 HBL1_DMSO_200M_050219_2,18210 HBL1_DMSO_200M_050219_2,18210,IPPVILRL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18211 97.504 704.0 192590.0 25 0 9995.7 -1 0 119 1081.529071963174 3241.565386489722 3 1082.199023425579 MULTI CID FTMS 0 0 0 18200 244268.5 0.3260350829891649 -4 0.5777359008789062 11 4 NRRSW[QT]{[QV]|[N{I|L}]|[RA]|[KV]} 9 -1 28.886 0.0 0.0 0.89112 0.0 0.0 2068.043463741452 0.0 2068.043463741452 0.0 17.319393642848482 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.4247425010840047 NRRSW[QT]{[QV]|[N{I|L}]|[RA]|[KV]} 0.89112 - 1355 1 1.441 92250.4 1.0 13139 5070 18200 HBL1_DMSO_200M_050219_2,18211 HBL1_DMSO_200M_050219_2,18211, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18212 97.51 364.0 484460.0 25 0 64108.0 + 39403 VALARALFI 9 99 487.3132516557011 972.6119503782022 2 487.3131286501884 MULTI CID FTMS 0 0 0 18200 241859.609375 0.6480056649681252 -1 0.1616897583007812 12 Unmodified _VALARALFI_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 61.357469665136826 0.0253304979873734 4 {[VA]|[{I|L}G]}{I|L}ARA{I|L}{M(Oxidation (M))|F}{I|L} 9 0 + 62.545 0.0 0.0 6.4306 6.4306 85.664 0.0 0.0 0.0 4.937646547500947 15.96279041616178 4.937646547500947 8.423552944845483 0 2.0994850021680094 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}{I|L}ARA{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]RA{I|L}G{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]RAVA{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]RA{I|L}AV{M(Oxidation (M))|F}{I|L};[{I|L}A]RA{I|L}A{M(Oxidation (M))|F}V{I|L};[{I|L}A]RA{I|L}{M(Oxidation (M))|F}AV{I|L};{I|L}{I|L}GARA{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]VARA{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]R[Q{I|L}]{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]{M(Oxidation (M))|F}[VG][RV]V{I|L} 6.4306;5.5645;5.3835;5.074;4.5599;4.4314;4.1879;4.1697;3.1982;0.63482 +;-;-;-;-;-;-;-;-;- + 310 1 1.441 137153.1 1.0 13140 5070 18200 HBL1_DMSO_200M_050219_2,18212 HBL1_DMSO_200M_050219_2,18212,VALARALFI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18213 97.524 800.0 205190.0 25 0 34942.0 + 32680 SDISLFDESE 10 166 571.2481947609477 1140.4818365886954 2 571.2485229372978 MULTI CID FTMS 0 0 0 18200 211760.875 1.0 0 0.0 13 Unmodified _SDISLFDESE_ REV__ENSG00000081148|ENST00000193391|IMPG2 14.838274106304384 0.5985701837916485 4 {M(Oxidation (M))|F}{I|L}EV[WE] 6 -1 25.45 0.0 0.0 2.2315 0.0 0.0 319.0671382357574 0.0 319.0671382357574 0.0 7.69856029215914 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {M(Oxidation (M))|F}{I|L}EV[WE] 2.2315 - 857 1 1.441 128375.0 0.9700000286102296 13141 5070 18200 HBL1_DMSO_200M_050219_2,18213 HBL1_DMSO_200M_050219_2,18213,SDISLFDESE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18214 97.539 800.0 221170.0 25 0 70747.0 -1 0 120 1032.4405321811182 2062.866511429037 2 1032.442797839642 MULTI CID FTMS 0 0 0 18200 199922.0 1.0 0 0.0 14 4 [YQ]{I|L}EN[RD]{I|L} 8 -1 30.271 0.0 0.0 1.4674 0.0 0.0 0.0 1028.3291144061957 1028.3291144061957 16.146387799684874 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.9604093769761876 [YQ]{I|L}EN[RD]{I|L} 1.4674 - 2612 1 1.441 116340.0 0.9300000071525574 13142 5070 18200 HBL1_DMSO_200M_050219_2,18214 HBL1_DMSO_200M_050219_2,18214, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18215 97.553 800.0 186190.0 25 0 15700.0 23950 LVRLEELEL 9 154 557.3289130794685 1112.643273225737 2 557.3302490115166 MULTI CID FTMS 0 0 0 18200 191993.28125 1.0 0 0.0 15 Unmodified _LVRLEELEL_ ENSG00000131409|ENST00000652263|LRRC4B 34.40172386719151 0.1061884637610825 4 [{I|L}V]R{I|L}E{I|L}EE{I|L} 9 2 + 57.492 0.0 0.0 5.1671 5.1671 76.291 0.0 0.0 0.0 11.908774565059588 30.41423005939788 11.908774565059588 4.259687322722812 0 0.2887254899964357 0.8239087409443188 0.0 0.3054621874040891 [{I|L}V]R{I|L}E{I|L}EE{I|L};[{I|L}V]{I|L}RE{I|L}EE{I|L};[{I|L}V]RH{M(Oxidation (M))|F}{I|L}SE{I|L};[{I|L}V]{I|L}[VG]E{I|L}EE{I|L};[{I|L}V]R{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}SE{I|L};[{I|L}V]{I|L}R{[{M(Oxidation (M))|F}H]|[RQ]}SE{I|L};[{I|L}V]{I|L}[VG]{[{M(Oxidation (M))|F}H]|[RQ]}SE{I|L};{[QN]|[E{I|L}]|[KN]}H[K{I|L}]{I|L}[{M(Oxidation (M))|F}T]{I|L};[{I|L}V]RH{M(Oxidation (M))|F}{I|L}MVV;{[QN]|[E{I|L}]|[KN]}H[K{I|L}]{I|L}Y[TP] 5.1671;4.7843;3.7082;3.6822;3.4819;3.0991;2.2715;1.6738;1.6678;1.5821 -;-;-;-;-;-;-;-;-;- 662 1 1.441 116621.6 0.8700000047683716 13143 5070 18200 HBL1_DMSO_200M_050219_2,18215 HBL1_DMSO_200M_050219_2,18215,LVRLEELEL True False RLVIELEEL 97.553299 557.330249011517 1772786.0 18200.0 nc|ENSG00000184220|Q9BQ75-2|CMSS1;;ENSG00000184220|ENST00000421999|CMSS1 2.1118456522623696 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18216 97.559 309.0 438060.0 25 0 58716.0 + 27763 PLPLPPLAL 9 97 465.8047078018629 929.5948626705258 2 465.8046752810478 MULTI CID FTMS 0 0 0 18200 172686.59375 0.1359444597790731 -15 1.5795516967773438 16 Unmodified _PLPLPPLAL_ ENST00000591090.5_1_19:12859061-12859118:+|nuORF 56.04830969593885 0.0282699710924866 4 {I|L}{I|L}PPPP{I|L}A{I|L} 9 2 + 54.421 0.0 0.0 5.8543 5.8543 87.78 0.0 0.0 0.0 20.476599227271848 11.871987629411294 11.871987629411294 14.240148036448195 0 1.360924374808178 2.0 0.0 0.0 {I|L}{I|L}PPPP{I|L}A{I|L};[{I|L}P]PPPA{I|L}{I|L}{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{I|L}{I|L}{I|L};[{I|L}P]PPP{I|L}A{I|L}{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}A{I|L}{I|L};{I|L}{I|L}[YK]P{I|L}A{I|L};[{I|L}P]PAPP{I|L}{I|L}{I|L};[{I|L}P]P{I|L}PPA{I|L}{I|L};[{I|L}P]PP{I|L}PA{I|L}{I|L};{I|L}{I|L}[YK]PA{I|L}{I|L} 5.8543;4.3224;4.3101;3.8092;3.7969;3.762;3.7372;3.6198;3.5909;3.5786 -;-;-;-;-;-;-;-;-;- 515 + 1 1.441 108927.6 1.0 13144 5070 18200 HBL1_DMSO_200M_050219_2,18216 HBL1_DMSO_200M_050219_2,18216,PLPLPPLAL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18217 97.563 146.0 257600.0 25 0 35364.0 + 8441 ESLYRGDLL 9 78 533.2817167909258 1064.5488806486514 2 533.2761718630791 MULTI CID FTMS 0 0 0 18200 184312.625 1.0 0 0.0 17 Unmodified _ESLYRGDLL_ REV__ENST00000532739.1_1_16:16465196-16470832:+|nuORF 13.90604991867851 0.4602628045680013 4 [QP]AVY{M(Oxidation (M))|F}D{I|L}{I|L} 9 -1 + 24.575 0.0 0.0 2.3084 2.3084 64.535 0.0 0.0 0.0 2.340832060333682 4.634475811582632 2.340832060333682 2.340832060333682 0 0.3182503180159344 0.0 0.0 0.0 [QP]AVY{M(Oxidation (M))|F}D{I|L}{I|L};[PA]QVY{M(Oxidation (M))|F}D{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{[NV]|[RG]}TD{I|L}{I|L};[{I|L}T]D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TD{I|L}{I|L};[PA]GAVY{M(Oxidation (M))|F}D{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TD{I|L}{I|L};{[NV]|[RG]}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}TD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y[WK]D{I|L}{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}TD{I|L}{I|L};{[NV]|[RG]}{I|L}[MT]{M(Oxidation (M))|F}D{I|L}{I|L} 2.3084;2.0886;2.0239;1.9495;1.9083;1.7411;1.7411;1.4153;1.3409;1.1755 -;-;-;-;-;-;-;-;-;- 148 1 1.441 37041.0 1.0 13145 5070 18200 HBL1_DMSO_200M_050219_2,18217 HBL1_DMSO_200M_050219_2,18217,ESLYRGDLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18218 97.577 800.0 141600.0 25 0 15753.0 20631 LLPQQLLQ 8 127 476.7955590019109 951.5765650706218 2 476.7955200076103 MULTI CID FTMS 0 0 0 18200 166516.84375 0.7337814621044618 -10 1.1765975952148438 18 Unmodified _LLPQQLLQ_ ENSG00000188655|ENST00000404716|RNASE9;nc|ENSG00000188655|P60153|RNASE9 24.67388899826682 0.525179942228231 4 {I|L}{I|L}PP 4 5 36.995 0.0 0.0 3.8877 0.0 0.0 0.0 528.2819307916624 528.2819307916624 21.88248418275648 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L}PP 3.8877 - 296 + 1 1.441 90708.2 0.6899999976158142 13146 5070 18200 HBL1_DMSO_200M_050219_2,18218 HBL1_DMSO_200M_050219_2,18218,LLPQQLLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18219 97.585 433.0 204000.0 25 0 13458.0 + 3209 AWIDAEVTEF 10 144 590.7796948074549 1179.5448366817095 2 590.7801391482353 MULTI CID FTMS 0 0 0 18200 168049.3125 1.0 0 0.0 19 Unmodified _AWIDAEVTEF_ ENSG00000135763|ENST00000258243|URB2 14.838274106304384 0.5985701837916485 4 [{M(Oxidation (M))|F}E]Q{M(Oxidation (M))|F}{I|L}ER[DP] 9 9 + 16.308 0.0 0.0 1.3825 1.3825 62.462 0.0 0.0 0.0 0.0 0.0 0.0 1.5701373412357302 0 0.0 0.0 0.1747425010840047 0.0 [{M(Oxidation (M))|F}E]Q{M(Oxidation (M))|F}{I|L}ER[DP];{[DA]|[EG]}E{I|L}S{I|L}{M(Oxidation (M))|F}QEE;[{M(Oxidation (M))|F}E]Q{M(Oxidation (M))|F}{I|L}S{I|L}[C(Carbamidomethyl (C))H];{[TV]|[{I|L}S]}WE{I|L}{M(Oxidation (M))|F}QEE;[{M(Oxidation (M))|F}E][AG]{M(Oxidation (M))|F}{I|L}ER[DP];[{M(Oxidation (M))|F}E]Q{M(Oxidation (M))|F}{I|L}S[TP][DP];[{M(Oxidation (M))|F}E]Q{M(Oxidation (M))|F}{I|L}S[C(Carbamidomethyl (C))H]{I|L};{[DA]|[EG]}E{I|L}S{I|L}{M(Oxidation (M))|F}[AG]EE;{[CP]|[EA]}D{I|L}S{I|L}{M(Oxidation (M))|F}QEE;[Q{I|L}]K[YG]WQEE 1.3825;1.2494;0.91206;0.72989;0.60189;0.53476;0.48766;0.47248;0.38174;0.3373 -;-;-;-;-;-;-;-;-;- 691 + 1 1.441 68746.3 1.0 13147 5070 18200 HBL1_DMSO_200M_050219_2,18219 HBL1_DMSO_200M_050219_2,18219,AWIDAEVTEF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18220 97.598 800.0 243680.0 25 0 19257.0 -1 0 123 1186.5580782050745 2371.1016034769486 2 1187.055590808392 MULTI CID FTMS 0 0 0 18200 144294.1875 1.0 0 0.0 20 4 [QP][QT]PPPPA 9 -1 45.652 0.0 0.0 1.9254 0.0 0.0 0.0 1454.6148840768112 1454.6148840768112 12.250770690863355 0.0 0.0 0.0 0 0.5 0.0 0.2742275032520141 1.3807196863200843 [QP][QT]PPPPA 1.9254 - 7403 1 1.441 117407.9 0.5799999833106995 13148 5070 18200 HBL1_DMSO_200M_050219_2,18220 HBL1_DMSO_200M_050219_2,18220, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18222 97.603 1.3 34028000.0 25 0 4405900.0 + 4030 DALRSILTI 9 69 501.3032265673282 1000.5919002014564 2 501.3037902712822 MULTI CID FTMS 0 0 0 18221 33307888.0 0.3096212783969811 2 -0.146514892578125 1 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 40.23920728925047 0.0741434193262949 4 [{I|L}T]R[DG]{I|L}{I|L}T{I|L} 9 4 + 63.35 0.0 0.0 6.3313 6.3313 83.123 0.0 0.0 0.0 10.66438345022135 16.478174818886373 10.66438345022135 6.020599913279625 0 0.5 1.6989700043360187 0.4247425010840047 0.0 [{I|L}T]R[DG]{I|L}{I|L}T{I|L};[{I|L}T]R{[VA]|[{I|L}G]}D{I|L}T{I|L};{[DA]|[EG]}T[RV]{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}D{I|L}T{I|L};[{I|L}T][VG]{[RE]|[WV]}{I|L}T{I|L};[{I|L}T]R{[VA]|[{I|L}G]}S{I|L}E{I|L};[{I|L}T]{I|L}{[NV]|[RG]}S{I|L}E{I|L};{[SA]|[TG]}E[RV]{I|L}{I|L}T{I|L};{[SA]|[TG]}[{I|L}V]{[RE]|[WV]}{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}N[KS]{I|L} 6.3313;5.7296;5.2655;5.2527;4.7582;4.6282;4.1513;3.7307;2.9353;2.5782 -;-;-;-;-;-;-;-;-;- 289 1 1.442 39918.3 1.0 13149 5071 18221 HBL1_DMSO_200M_050219_2,18222 HBL1_DMSO_200M_050219_2,18222,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18223 97.604 21.0 2148700.0 25 0 372030.0 + 23053 LSLFRCCGCSL 11 81 601.2772920853854 1200.5400312375707 2 601.2780029177666 MULTI CID FTMS 0 0 0 18221 2225679.25 0.7126822568898143 1 -0.1151275634765625 2 Unmodified _LSLFRCCGCSL_ REV__chr2:26477506-26477649|11|13.18|0.78|4.08|-|1|OTOF,OTOF|1;REV__ENSG00000115155|ENST00000272371|OTOF;REV__nc|ENSG00000115155|Q9HC10-2|OTOF;REV__nc|ENSG00000115155|Q9HC10-3|OTOF;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__nc|ENSG00000115155|Q9HC10-5|OTOF 12.240655878213236 0.7805268987462184 4 {[TV]|[{I|L}S]}{I|L} 3 -1 28.116 0.0 0.0 2.342 0.0 0.0 0.0 884.3169226772769 884.3169226772769 1.7685868496383603 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.0 {[TV]|[{I|L}S]}{I|L} 2.342 + + 121 1 1.442 36354.9 1.0 13150 5071 18221 HBL1_DMSO_200M_050219_2,18223 HBL1_DMSO_200M_050219_2,18223,LSLFRCCGCSL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18224 97.605 18.0 3532600.0 25 0 549940.0 + 21457 LPHLPSLEI 9 83 509.8000880035055 1017.585623073811 2 509.8001586794853 MULTI CID FTMS 0 0 0 18221 2570566.0 1.0 0 0.0 3 Unmodified _LPHLPSLEI_ ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2 30.22481116460888 0.1466181017706357 4 [H{I|L}]P{I|L}[PS]{I|L}E{I|L} 9 2 + 58.382 0.0 0.0 5.7373 5.7373 83.47 0.0 0.0 0.0 11.938200260161125 16.478174818886373 11.938200260161125 9.075221787320515 0 0.4247425010840047 1.0969100130080565 0.7302046884880937 0.0 [H{I|L}]P{I|L}[PS]{I|L}E{I|L};[H{I|L}]P{I|L}[PS]E{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[PS]{I|L}E{I|L};[H{I|L}]P{I|L}{[ES]|[DT]|[{I|L}C]}P{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[PS]E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}PS{I|L}HP{I|L}{I|L};[VP]TE{I|L}HP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}P{I|L}{I|L};[{I|L}V][Y{M(Oxidation (M))|F}][PG]P{I|L}{I|L};[KP]{I|L}[QP]{[HG]|PP}E{I|L} 5.7373;4.8455;4.5641;3.9592;3.6723;3.5154;3.1945;2.786;2.4694;1.1327 -;-;-;-;-;-;-;-;-;- 306 1 1.442 52860.1 1.0 13151 5071 18221 HBL1_DMSO_200M_050219_2,18224 HBL1_DMSO_200M_050219_2,18224,LPHLPSLEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18225 97.607 87.0 517920.0 25 0 50138.0 + 26540 NVIGEPFLNV 10 82 551.3008734156055 0 551.3006469607353 PEAK CID FTMS 0 0 0 18221 472508.78125 0.82675908042915 -1 0.1552047729492187 4 Unmodified _NVIGEPFLNV_ ENSG00000104738|ENST00000649973|MCM4 43.77239144664712 0.0832498809322189 4 {I|L}AD{I|L} 4 8 9.897 0.0 0.0 0.89925 0.0 0.0 444.2292970247671 241.09906946353752 685.3283664883046 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}AD{I|L} 0.89925 - 181 + 1 1.442 41789.5 1.0 13152 5071 18221 HBL1_DMSO_200M_050219_2,18225 HBL1_DMSO_200M_050219_2,18225,NVIGEPFLNV True True NVIGEPFLNV 97.607363 551.300646960735 9204817.0 18221.0 ENSG00000104738|ENST00000649973|MCM4 7.796716531117757 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18226 97.611 189.0 471920.0 25 0 57703.0 + 30316 RVLELIPQI 9 72 540.8418164944808 1079.6690800557617 2 540.8429443240166 MULTI CID FTMS 0 0 0 18221 293514.375 0.6459954131895046 1 -0.1151275634765625 5 Unmodified _RAARRLPQI_ nc|ENSG00000100284|O60784-2|TOM1;nc|ENSG00000100284|O60784-4|TOM1;nc|ENSG00000100284|O60784-3|TOM1;ENST00000424387.5_1_22:35695884-35743199:+|nuORF;ENST00000491987.1_1_22:35723272-35729230:+|nuORF;ENST00000404284.6_1_22:35717823-35727385:+|nuORF;ENSG00000100284|ENST00000449058|TOM1 26.88365393820708 0.1891292719743517 4 {I|L}{I|L}PQ{I|L} 5 5 33.456 0.0 0.0 3.0987 0.0 0.0 497.2966373870676 0.0 497.2966373870676 0.0 18.022562268522577 0.0 0.0 0 1.1237125054200234 0.0 0.0 0.0 {I|L}{I|L}PQ{I|L} 3.0987 - 91 1 1.442 76630.8 1.0 13153 5071 18221 HBL1_DMSO_200M_050219_2,18226 HBL1_DMSO_200M_050219_2,18226,RAARRLPQI False False RVLELIPQI 97.611002 540.842944324017 11469731.0 18221.0 nc|ENSG00000100284|O60784-2|TOM1;;nc|ENSG00000100284|O60784-4|TOM1;;nc|ENSG00000100284|O60784-3|TOM1;;ENST00000424387.5_1_22:35695884-35743199:+|nuORF;;ENST00000491987.1_1_22:35723272-35729230:+|nuORF;;ENST00000404284.6_1_22:35717823-35727385:+|nuORF;;ENSG00000100284|ENST00000449058|TOM1 3.9244303703308105 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18227 97.614 173.0 344130.0 25 0 72611.0 -1 0 69 326.17111147369275 650.3276700141855 2 326.1711303591728 MULTI CID FTMS 0 0 0 18221 287666.78125 0.0371025078361819 6 -0.3058242797851562 6 4 G 1 -1 13.979 0.0 0.0 2.1496 0.0 0.0 575.294770089184 0.0 575.294770089184 0.0 13.979400086720377 0.0 0.0 0 0.0 0.0 0.0 0.0 G 2.1496 - 1 + 1 1.442 52837.8 1.0 13154 5071 18221 HBL1_DMSO_200M_050219_2,18227 HBL1_DMSO_200M_050219_2,18227, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18228 97.619 247.0 347660.0 25 0 91780.0 + 17775 KQFGNILIL 9 107 523.3237739460511 1044.632994958902 2 523.3240234255791 MULTI CID FTMS 0 0 0 18221 280698.25 0.2537655707269147 1 -0.1151275634765625 7 Unmodified _KQFGNILIL_ ENSG00000102172|ENST00000404933|SMS;ENST00000436365.1_1_X:47577979-47578291:-|nuORF;nc|ENSG00000102172|P52788-2|SMS 36.04419817259434 0.0971720506436186 4 H{I|L}{I|L}{I|L}{I|L} 5 5 26.51 0.0 0.0 2.5378 0.0 0.0 437.21394545722814 0.0 437.21394545722814 0.0 11.025684359364403 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 H{I|L}{I|L}{I|L}{I|L} 2.5378 - 186 1 1.442 70437.9 1.0 13155 5071 18221 HBL1_DMSO_200M_050219_2,18228 HBL1_DMSO_200M_050219_2,18228,KQFGNILIL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18229 97.624 250.0 361000.0 25 0 55139.0 + 20418 LLIDELNKL 9 101 535.8259683277192 1069.6373837222384 2 535.8267089724541 MULTI CID FTMS 0 0 0 18221 223411.171875 1.0 0 0.0 8 Unmodified _LLIDELNKL_ ENSG00000011426|ENST00000265748|ANLN;nc|ENSG00000011426|Q9NQW6-2|ANLN 81.89019881105858 0.0170587746866453 4 {I|L}{I|L}{I|L}DE{I|L}NK{I|L} 9 0 + 89.624 0.0 0.0 8.379 8.379 92.483 0.0 0.0 0.0 52.224024238111895 8.997199140551473 8.997199140551473 9.208187539523747 0 0.4247425010840047 2.0 0.6549471895720985 1.579689690656103 + + {I|L}{I|L}{I|L}DE{I|L}NK{I|L};{I|L}{I|L}{I|L}DE{I|L}GGK{I|L};{I|L}{I|L}{I|L}DE{I|L}[KQ]V;{I|L}{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}WW{I|L} 8.379;7.5181;7.1626;4.6384 +;-;-;- + 465 + 1 1.442 76683.1 1.0 13156 5071 18221 HBL1_DMSO_200M_050219_2,18229 HBL1_DMSO_200M_050219_2,18229,LLIDELNKL True True LLIDELNKL 97.623654 535.826708972454 1889516.25 18221.0 ENSG00000011426|ENST00000265748|ANLN;;nc|ENSG00000011426|Q9NQW6-2|ANLN 4.40392788251241 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18230 97.637 800.0 306290.0 25 0 37040.0 + 11558 GIVDILHKL 9 169 336.5465617939008 1006.6178559819024 3 336.5463439822197 MULTI CID FTMS 0 0 0 18221 187274.03125 0.7118741816932591 -1 0.1552047729492187 9 Unmodified _GIVDILHKL_ ENSG00000114098|ENST00000469044|ARMC8;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;ENST00000466762.1_1_3:137982955-138014731:+|nuORF;nc|ENSG00000114098|Q8IUR7-2|ARMC8;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8;nc|ENSG00000114098|Q8IUR7-8|ARMC8 36.12702656103203 0.0967173616627612 4 {[VA]|[{I|L}G]}VD{I|L}{I|L}HK{I|L} 9 0 + 72.464 0.0 0.0 7.1988 7.1988 79.724 0.0 0.0 0.0 48.98918952087055 13.290684637946711 13.290684637946711 1.7731749024395782 0 0.2887254899964357 2.0 0.3054621874040891 0.5709991640913001 + + {[VA]|[{I|L}G]}VD{I|L}{I|L}HK{I|L};{[VA]|[{I|L}G]}V{I|L}D{I|L}HK{I|L};{[VA]|[{I|L}G]}{I|L}VD{I|L}HK{I|L};{[VA]|[{I|L}G]}VD{I|L}[HK]{I|L}{I|L};{[VA]|[{I|L}G]}V{I|L}D[HK]{I|L}{I|L};{[VA]|[{I|L}G]}{I|L}VD[HK]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[H{I|L}]K{I|L}{I|L}R 7.1988;7.0226;6.1848;4.3613;4.1851;3.3473;0.98485 +;-;-;-;-;-;- + 570 + 1 1.442 195145.4 0.6399999856948853 13157 5071 18221 HBL1_DMSO_200M_050219_2,18230 HBL1_DMSO_200M_050219_2,18230,GIVDILHKL True True GIVDILHKL 97.637469 336.54634398222 2107845.25 18221.0 nc|ENSG00000114098|Q8IUR7-2|ARMC8;;nc|ENSG00000114098|Q8IUR7-8|ARMC8;;nc|ENSG00000114098|Q8IUR7-3|ARMC8;;ENSG00000114098|ENST00000469044|ARMC8;;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;;nc|ENSG00000114098|Q8IUR7-7|ARMC8;;ENST00000466762.1_1_3:137982955-138014731:+|nuORF 4.568474213282268 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18231 97.642 245.0 213650.0 25 0 25949.0 + -1 QGVMTEWCP 9 89 554.2337318520603 1106.4529107709204 2 554.2333862185478 MULTI CID FTMS 0 0 0 18221 182448.96875 0.3723085293532282 1 -0.1151275634765625 10 Carbamidomethyl (C) _QGVMTEWC(Carbamidomethyl (C))P_ REV__ENSG00000165091|ENST00000297784|TMC1 7.910154910731844 0.6385446671287552 4 V 1 -1 14.604 0.0 0.0 1.3199 0.0 0.0 989.3734791686728 0.0 989.3734791686728 0.0 4.414543788274797 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3199 + + 56 + 1 1.442 49016.0 1.0 13158 5071 18221 HBL1_DMSO_200M_050219_2,18231 HBL1_DMSO_200M_050219_2,18231,QGVMTEWCP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18232 97.647 287.0 319970.0 25 0 24704.0 + 23281 LSWNKTVEL 9 108 545.3000667161175 1088.585580499035 2 545.3000976443291 MULTI CID FTMS 0 0 0 18221 160313.875 0.5707669261538516 3 -0.2171554565429687 11 Unmodified _LSWNKTVEL_ ENSG00000196358|ENST00000393229|NTNG2;nc|ENSG00000196358|Q96CW9-2|NTNG2 32.78568957990786 0.1150597335874693 4 {[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L} 9 3 + 53.875 0.0 0.0 4.949 4.949 75.834 0.0 0.0 0.0 4.722450746408491 14.973024840566469 4.722450746408491 4.722450746408491 0 0.6861818737241735 0.8860566476931632 0.7059771852360797 0.0 {[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TVE{I|L};[R{M(Oxidation (M))|F}][DP]{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{NN|[MP]|[D{I|L}]|[EV]}T{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}K[NS]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}{NN|[MP]|[D{I|L}]|[EV]}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}K[NS]{I|L};{[TV]|[{I|L}S]}[WE]{I|L}K[NS]{I|L};[{I|L}T]{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[PS]VE{I|L};[{I|L}T][WD]{I|L}K[NS]{I|L} 4.949;4.5152;3.3928;2.8727;2.7632;2.4389;2.3294;2.1676;2.0683;1.7196 -;-;-;-;-;-;-;-;-;- 539 1 1.442 79058.5 1.0 13159 5071 18221 HBL1_DMSO_200M_050219_2,18232 HBL1_DMSO_200M_050219_2,18232,LSWNKTVEL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18233 97.651 203.0 453000.0 25 0 50959.0 + 11501 GILLRLPQV 9 117 504.8321503035816 1007.6497476739632 2 504.8333923220634 MULTI CID FTMS 0 0 0 18221 151178.65625 0.4809773179780113 1 -0.1151275634765625 12 Unmodified _GILLRLPQV_ ENSG00000163660|ENST00000295926|CCNL1;ENSG00000221978|ENST00000400809|CCNL2;ENST00000466101.1_1_3:156877139-156877916:-|nuORF;ENST00000471044.1_1_3:156876653-156877916:-|nuORF;nc|ENSG00000163660|Q9UK58-4|CCNL1;nc|ENSG00000163660|Q9UK58-5|CCNL1;nc|ENSG00000163660|Q9UK58-6|CCNL1;nc|ENSG00000221978|Q96S94-2|CCNL2;nc|ENSG00000221978|Q96S94-4|CCNL2;nc|ENSG00000221978|Q96S94-5|CCNL2 67.34385681178166 0.0221257235307089 4 {[VA]|[{I|L}G]}{I|L}{I|L}R{I|L}[NP]{I|L} 9 2 + 69.089 0.0 0.0 6.8565 6.8565 83.767 0.0 0.0 0.0 16.61249086946625 4.771212547196626 4.771212547196626 4.771212547196626 0 1.6677353201839438 2.0 0.0 1.4049471895720984 {[VA]|[{I|L}G]}{I|L}{I|L}R{I|L}[NP]{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}R{I|L}[QP]V;{[VA]|[{I|L}G]}{I|L}{I|L}[KS]HK{I|L};{[VA]|[{I|L}G]}{I|L}[KS]{I|L}HK{I|L};{[VA]|[{I|L}G]}{I|L}TA[VP]PK{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}R{I|L}[VG][PA];{[VA]|[{I|L}G]}{I|L}[KS]KH{I|L}{I|L};{[VA]|[{I|L}G]}[TA]{I|L}[VP]PK{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}RAPG[{I|L}V];{[VA]|[{I|L}G]}{I|L}{I|L}VGAPG[{I|L}V] 6.8565;6.383;6.2817;5.4854;5.3614;5.2446;5.1002;4.3741;3.8711;3.83 -;+;-;-;-;-;-;-;-;- + 1035 + 1 1.442 73722.4 1.0 13160 5071 18221 HBL1_DMSO_200M_050219_2,18233 HBL1_DMSO_200M_050219_2,18233,GILLRLPQV True True GILLRLPQV 97.6512 504.833392322063 4734744.5 18221.0 nc|ENSG00000163660|Q9UK58-5|CCNL1;;nc|ENSG00000163660|Q9UK58-4|CCNL1;;ENST00000466101.1_1_3:156877139-156877916:-|nuORF;;nc|ENSG00000221978|Q96S94-2|CCNL2;;ENST00000471044.1_1_3:156876653-156877916:-|nuORF;;ENSG00000221978|ENST00000400809|CCNL2;;nc|ENSG00000221978|Q96S94-5|CCNL2;;nc|ENSG00000221978|Q96S94-4|CCNL2;;ENSG00000163660|ENST00000295926|CCNL1;;nc|ENSG00000163660|Q9UK58-6|CCNL1 2.487063010533651 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18234 97.666 800.0 375800.0 25 0 60619.0 23669 LTSALTRKITL 11 81 608.8827312255124 1215.7509095178248 2 608.8832885622978 MULTI CID FTMS 0 0 0 18221 133003.71875 0.587176106794635 -2 0.31689453125 13 Unmodified _LTSALTRKITL_ ENSG00000106348|ENST00000338791|IMPDH1;ENST00000418838.1_1_X:40219448-40219874:-|nuORF;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1 8.745405648335112 0.8338865417133445 4 T{I|L} 2 9 16.995 0.0 0.0 1.3979 0.0 0.0 983.6081310527842 0.0 983.6081310527842 0.0 7.926740567922437 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + T{I|L} 1.3979 + + 38 + 1 1.442 220354.2 0.6200000047683716 13161 5071 18221 HBL1_DMSO_200M_050219_2,18234 HBL1_DMSO_200M_050219_2,18234,LTSALTRKITL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18235 97.68 800.0 136550.0 25 0 15722.0 -1 VCVCVCMCV 9 123 358.14209560132247 0 358.1431762576103 PEAK CID FTMS 0 0 0 18221 122564.109375 1.0 0 0.0 14 2 Carbamidomethyl (C) _VC(Carbamidomethyl (C))VC(Carbamidomethyl (C))VCMCV_ ENST00000256495.3_1_3:5025489-5025579:+|nuORF;ENST00000329608.10_2_1:110453327-110453405:+|nuORF;ENST00000369146.7_1_1:149876356-149876434:-|nuORF;ENST00000464989.5_1_2:220308425-220308515:+|nuORF 2.9952420565917617 0.3444685223463734 4 EQ 2 -1 10.573 0.0 0.0 1.4803 0.0 0.0 99.06596275724128 355.09226404361567 454.15822680085694 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 EQ 1.4803 - 9 + 1 1.442 91385.8 0.449999988079071 13162 5071 18221 HBL1_DMSO_200M_050219_2,18235 HBL1_DMSO_200M_050219_2,18235,VCVCVCMCV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18236 97.688 427.0 269720.0 25 0 31805.0 + 26664 NYIEFTRIL 9 97 584.8219918328241 1167.629430732448 2 584.8227416872978 MULTI CID FTMS 0 0 0 18221 120906.1875 0.5600298296735483 -1 0.1552047729492187 15 Unmodified _NYIEFTRIL_ ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B 53.40400417844725 0.0329064971918313 4 [YN]{I|L}E{M(Oxidation (M))|F}TR{I|L}{I|L} 9 0 + 71.967 0.0 0.0 6.1635 6.1635 90.752 0.0 0.0 0.0 46.27597487036688 8.308771563294144 8.308771563294144 29.92915016631557 0 1.6307196863200843 2.0 0.4247425010840047 0.0 + + [YN]{I|L}E{M(Oxidation (M))|F}TR{I|L}{I|L};[YN]{I|L}[KQ][YN]{I|L}{I|L};[YN][KQ]{I|L}[YN]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[YQ]{I|L}[YN]{I|L}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}[RV]{I|L}[YN]{I|L}{I|L} 6.1635;3.6003;2.6527;1.2658;0.70158 +;-;-;-;- + 234 + 1 1.442 88797.3 1.0 13163 5071 18221 HBL1_DMSO_200M_050219_2,18236 HBL1_DMSO_200M_050219_2,18236,NYIEFTRIL True True NYIEFTRIL 97.687633 584.822741687298 3823093.5 18221.0 ENSG00000101608|ENST00000217652|MYL12A;;ENSG00000118680|ENST00000237500|MYL12B 7.253170490264893 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18237 97.703 800.0 128630.0 25 0 5976.5 + 25580 NFDVREIVNNI 11 143 666.8497988670777 1331.6850448009552 2 666.8497802615166 MULTI CID FTMS 0 0 0 18221 104774.4140625 1.0 0 0.0 16 Unmodified _NFDVREIVNNI_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 48.07275321834293 0.1283031204265279 4 {[VA]|[{I|L}G]}AKQDN{M(Oxidation (M))|F}VND 11 10 40.148 0.0 0.0 3.0148 0.0 0.0 0.0 127.08327305347792 127.08327305347792 21.37176837010104 0.0 0.0 0.0 0 0.5484550065040281 1.5228787452803376 0.3807196863200844 0.0 {[VA]|[{I|L}G]}AKQDN{M(Oxidation (M))|F}VND 3.0148 - 2219 1 1.442 81367.6 0.5199999809265137 13164 5071 18221 HBL1_DMSO_200M_050219_2,18237 HBL1_DMSO_200M_050219_2,18237,NFDVREIVNNI False True NFDVREIVNNI 97.702641 666.849780261517 1405712.625 18221.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 4.72532860438029 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18238 97.713 615.0 172690.0 25 0 13013.0 + 29351 QIYEIFQKL 9 139 591.3326533923694 1180.6507538515386 2 591.3334838747978 MULTI CID FTMS 0 0 0 18221 97006.09375 0.9806016390244828 -1 0.1552047729492187 17 Unmodified _QIYEIFQKL_ ENSG00000156976|ENST00000323963|EIF4A2;ENST00000429589.5_1_3:186502413-186505273:+|nuORF;ENST00000465792.1_1_3:186503888-186504086:+|nuORF;ENST00000466362.1_1_3:186502860-186504086:+|nuORF;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000475653.5_1_3:186502413-186505086:+|nuORF;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2 63.960520009940105 0.0238892913700936 4 [Q{I|L}]YE{I|L}{M(Oxidation (M))|F}QK{I|L} 9 0 [Q{I|L}] + + 42.665 23.658 9.8107 3.6137 3.6137 47.459 0.0 0.0 0.0 0.0 25.242363227360165 0.0 0.0 0 1.329689690656103 0.0 0.0 1.177825934852436 + + [Q{I|L}]YE{I|L}{M(Oxidation (M))|F}QK{I|L} 3.6137 + + 1061 + 1 1.442 82321.5 1.0 13165 5071 18221 HBL1_DMSO_200M_050219_2,18238 HBL1_DMSO_200M_050219_2,18238,QIYEIFQKL True True QIYEIFQKL 97.713385 591.333483874798 1197017.625 18221.0 nc|ENSG00000156976|Q14240-2|EIF4A2;;ENST00000492144.5_1_3:186503809-186505672:+|nuORF;;ENSG00000156976|ENST00000323963|EIF4A2;;ENST00000466362.1_1_3:186502860-186504086:+|nuORF;;ENST00000475653.5_1_3:186502413-186505086:+|nuORF;;ENST00000465792.1_1_3:186503888-186504086:+|nuORF;;ENST00000468362.5_1_3:186503755-186505556:+|nuORF;;ENST00000429589.5_1_3:186502413-186505273:+|nuORF 5.388894399007161 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18240 97.72 225.0 270370.0 25 0 13782.0 + + 8742 PNFDVREIVNNI 12 86 715.3749677730807 1428.7353826129613 2 715.3760253787041 MULTI CID FTMS 0 0 0 18239 256032.296875 0.2517806346603867 2 -0.1020278930664062 1 Unmodified _EVNYNIFYRVL_ nc|ENSG00000131747|P11388-4|TOP2A;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A 15.248480904072842 0.7179608125786238 4 [NP]{M(Oxidation (M))|F}D[Q{I|L}][KQ]VNN{I|L} 12 -1 + 73.713 0.0 0.0 5.1593 5.1593 75.941 0.0 0.0 0.0 18.23445525922196 10.348939488666424 10.348939488666424 4.018637558036673 0 2.2416440611282624 1.3979400086720375 0.0 0.3494850021680094 [NP]{M(Oxidation (M))|F}D[Q{I|L}][KQ]VNN{I|L};[NP]{M(Oxidation (M))|F}D[Q{I|L}][KQ]VMP{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DM[Q{I|L}][KQ]VNN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}MD[Q{I|L}][KQ]VNN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DWW[KQ]VNN{I|L};{[NV]|[RG]}EM[Q{I|L}][KQ]VNN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DWW[KQ]VMP{I|L};{[NV]|[RG]}EWW[KQ]VNN{I|L};{[NV]|[RG]}EWW[KQ]VMP{I|L} 5.1593;4.8781;3.8831;3.8491;3.3645;3.1622;3.0832;2.6436;2.3623 -;-;-;-;-;-;-;-;- 230 1 1.442 51774.8 1.0 13166 5072 18239 HBL1_DMSO_200M_050219_2,18240 HBL1_DMSO_200M_050219_2,18240,EVNYNIFYRVL False False PNFDVREIVNNI 97.720187 715.376025378704 16845176.0 18239.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 8.67616351445516 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18241 97.723 130.0 134310.0 25 0 15527.0 -1 LTIRMMMK 8 52 347.1868832188844 1038.5388202568531 3 347.1867248415947 MULTI CID FTMS 0 0 0 18239 344828.8125 0.1560069946189322 3 -0.1152801513671875 2 Oxidation (M) _LTIRM(Oxidation (M))MMK_ ENSG00000160606|ENST00000292090|TLCD1;nc|ENSG00000160606|Q96CP7-2|TLCD1 1.844237919475145 0.8131380230371302 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.442 21616.2 1.0 13167 5072 18239 HBL1_DMSO_200M_050219_2,18241 HBL1_DMSO_200M_050219_2,18241,LTIRMMMK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18242 97.726 147.0 373630.0 25 0 62291.0 + 9864 FPFGYVSNI 9 78 522.2631012076528 1042.5116494821054 2 522.2637817263603 MULTI CID FTMS 0 0 0 18239 320704.59375 0.8915401329785201 2 -0.1020278930664062 3 Unmodified _FPFGYVSNI_ ENSG00000159259|ENST00000314103|CHAF1B;ENST00000481458.1_1_21:37771819-37785123:+|nuORF 46.92087301778293 0.0471210510596396 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}V 6 5 42.88 0.0 0.0 4.1132 0.0 0.0 0.0 329.1476385800565 329.1476385800565 25.00508444608478 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}V 4.1132 - 394 1 1.442 49899.2 1.0 13168 5072 18239 HBL1_DMSO_200M_050219_2,18242 HBL1_DMSO_200M_050219_2,18242,FPFGYVSNI True True FPFGYVSNI 97.725783 522.26378172636 78974160.0 18239.0 ENST00000481458.1_1_21:37771819-37785123:+|nuORF;;ENSG00000159259|ENST00000314103|CHAF1B 5.688207149505615 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18243 97.731 278.0 316110.0 25 0 65025.0 + + 24614 RVMPSSFFL 9 103 542.2866002435084 1082.5586475538166 2 542.2866699099541 MULTI CID FTMS 0 0 0 18239 229271.890625 1.0 0 0.0 4 Unmodified _MLLNWFFL_ ENSG00000143155|ENST00000367833|TIPRL 26.34127834903884 0.4900704351052977 4 S{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 4 -1 38.488 0.0 0.0 3.5553 0.0 0.0 570.2958851544937 0.0 570.2958851544937 0.0 26.893878342760047 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 S{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 3.5553 - 140 1 1.442 73281.3 1.0 13169 5072 18239 HBL1_DMSO_200M_050219_2,18243 HBL1_DMSO_200M_050219_2,18243,MLLNWFFL False False RVMPSSFFL 97.730914 542.286669909954 3178764.5 18239.0 ENSG00000143155|ENST00000367833|TIPRL 6.2502641677856445 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18244 97.734 165.0 697000.0 25 0 67058.0 + 29325 QILTVLPRL 9 105 526.8449290093401 1051.6753050854802 2 526.8453857302666 MULTI CID FTMS 0 0 0 18239 184406.34375 0.2472509529275654 -6 0.8480682373046875 5 Unmodified _QILTVLPRL_ ENST00000509144.2_1_8:106809432-107072670:-|nuORF;ENST00000520078.5_1_8:106810397-107072670:-|nuORF;ENST00000520594.5_1_8:106799777-107072670:-|nuORF 34.40172386719151 0.1061884637610825 4 [Q{I|L}]{I|L}S{I|L}{I|L}PR{I|L} 9 2 + 62.695 0.0 0.0 5.9615 5.9615 80.373 0.0 0.0 0.0 52.237610926422526 8.794260687941495 8.794260687941495 4.771212547196626 0 0.7742275032520141 2.0 0.4247425010840047 0.3494850021680094 [Q{I|L}]{I|L}S{I|L}{I|L}PR{I|L};[Q{I|L}]{I|L}{I|L}S{I|L}PR{I|L};[Q{I|L}]{I|L}P[{I|L}T]VR{I|L};[Q{I|L}]{I|L}{I|L}[TP]VR{I|L};[KA]{I|L}E{I|L}{I|L}PR{I|L} 5.9615;5.5078;4.4648;4.2973;2.3472 -;-;-;-;- 195 + 1 1.442 92515.0 1.0 13170 5072 18239 HBL1_DMSO_200M_050219_2,18244 HBL1_DMSO_200M_050219_2,18244,QILTVLPRL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18245 97.738 197.0 627880.0 25 0 68961.0 + -1 HQLFHIFVV 9 102 570.3227275426033 1138.6309021520065 2 570.3214599490166 MULTI CID FTMS 0 0 0 18239 109481.7890625 1.0 0 0.0 6 Oxidation (M) _LLPM(Oxidation (M))PTEPLL_ ENSG00000006831|ENST00000357103|ADIPOR2 12.531546534597751 0.6372748319968624 4 [{I|L}P][WE]H{I|L}{M(Oxidation (M))|F}VV 9 -1 + 42.922 0.0 0.0 3.7696 3.7696 80.508 0.0 0.0 0.0 15.130967512398785 19.365677915492512 15.130967512398785 19.912260756924947 0 0.1549471895720985 1.5228787452803376 0.0 0.0 [{I|L}P][WE]H{I|L}{M(Oxidation (M))|F}VV;{I|L}{I|L}{I|L}[YC(Carbamidomethyl (C))]{I|L}{M(Oxidation (M))|F}VV;[{M(Oxidation (M))|F}V]A[HA]H{I|L}{M(Oxidation (M))|F}VV 3.7696;2.0208;1.2649 -;-;- 151 1 1.442 100025.4 1.0 13171 5072 18239 HBL1_DMSO_200M_050219_2,18245 HBL1_DMSO_200M_050219_2,18245,LLPMPTEPLL False False HQLFHIFVV 97.737941 570.3227 1526572.875 18239.0 ENSG00000006831|ENST00000357103|ADIPOR2 3.9477211038271594 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18246 97.745 380.0 294820.0 25 0 32460.0 27136 PFPAAPSFLI 10 118 530.296637325188 1058.578721717176 2 530.2969238162041 MULTI CID FTMS 0 0 0 18239 105199.484375 0.0223356362736332 5 -0.1906967163085937 7 Unmodified _PFPAAPSFLI_ chr16:81755966-81785943|32|12.44|0.55|4.51|+|1|None,PLCG2|1;ENST00000565054.5_1_16:81772902-81819632:+|nuORF 28.486842064014134 0.328649637529545 4 [WP]S{[TV]|[{I|L}S]}M{I|L}{I|L}{I|L} 9 7 + 47.074 0.0 0.0 4.4469 4.4469 77.121 0.0 0.0 0.0 7.689549981487069 14.973024840566469 7.689549981487069 7.689549981487069 0 0.75 0.9208187539523752 0.3252574989159953 0.0 [WP]S{[TV]|[{I|L}S]}M{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P[QT]M{I|L}{I|L}{I|L};[WP]S{[TV]|[{I|L}S]}{I|L}M{I|L}{I|L};[WP]{[WT]|[RM]}M{I|L}{I|L}{I|L};[TP]MS{[RE]|[WV]}{I|L}{I|L}{I|L};[{I|L}P]M[WR]M{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P[WR]M{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P[QT]{I|L}M{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[DG]{[RE]|[WV]}{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}DD{I|L}{I|L}{I|L} 4.4469;3.7205;3.5938;3.5277;3.4779;3.0072;2.9157;2.8674;2.7275;2.7275 -;-;-;-;-;-;-;-;-;- 542 1 1.442 94267.7 1.0 13172 5072 18239 HBL1_DMSO_200M_050219_2,18246 HBL1_DMSO_200M_050219_2,18246,PFPAAPSFLI False False False False non_canonical_ambiguous PXD020620_cell_line HBL1_DMSO_200M_050219_2 18248 97.754 377.0 644400.0 25 0 13553.0 -1 0 157 1081.529071963174 3241.565386489722 3 1081.864794909954 MULTI CID FTMS 0 0 0 18247 734438.1875 0.9642121796516548 -1 0.0313873291015625 1 4 MVNASQ[PS]D 9 -1 64.887 0.0 0.0 2.0017 0.0 0.0 245.08650579777424 2064.013663665887 2309.1001694636616 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 2.1307196863200843 0.8494850021680094 MVNASQ[PS]D 2.0017 - 6247 + 1 1.442 154260.4 1.0 13173 5073 18247 HBL1_DMSO_200M_050219_2,18248 HBL1_DMSO_200M_050219_2,18248, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18249 97.76 306.0 352880.0 25 0 18518.0 -1 0 90 791.3727088192045 2371.096297057813 3 791.7082397341728 MULTI CID FTMS 0 0 0 18247 240964.5 0.4959319485240442 11 -0.3303909301757812 2 4 PPPPPP{[QN]|[E{I|L}]|[KN]} 8 -1 35.413 0.0 0.0 1.4935 0.0 0.0 1528.668359599472 0.0 1528.668359599472 0.0 -5.038846618615665 -5.038846618615665 0.0 0 0.0 0.0 0.0 1.8580670093629823 PPPPPP{[QN]|[E{I|L}]|[KN]} 1.4935 - 8954 + 1 1.442 85158.4 1.0 13174 5073 18247 HBL1_DMSO_200M_050219_2,18249 HBL1_DMSO_200M_050219_2,18249, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18250 97.774 800.0 133170.0 25 0 14237.0 + 16036 ITIPEIATSEL 11 143 593.8314494146126 1185.6483458960251 2 593.8323852419853 MULTI CID FTMS 0 0 0 18247 113295.953125 0.2994732020723334 -20 2.011138916015625 3 Unmodified _ITIPEIATSEL_ ENSG00000153107|ENST00000341068|ANAPC1 114.6490535036381 0.024092277119725 4 {[QN]|[E{I|L}]|[KN]}PAT{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L} 11 7 + 55.137 0.0 0.0 4.6504 4.6504 78.034 0.0 0.0 0.0 16.843798115897606 10.550088832413527 10.550088832413527 7.812898245978168 0 0.3182503180159344 1.3010299956639813 1.3494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}PAT{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L};{[QN]|[E{I|L}]|[KN]}PAT{I|L}[W{M(Oxidation (M))|F}]P{I|L};{[QN]|[E{I|L}]|[KN]}PA{I|L}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L};{[QN]|[E{I|L}]|[KN]}P{I|L}TA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{I|L};{[QN]|[E{I|L}]|[KN]}PAKKA[YG]P{I|L};[EP]{I|L}AT{I|L}[W{M(Oxidation (M))|F}]P{I|L};{[QN]|[E{I|L}]|[KN]}PA[VP][HD]VP{I|L};{[QN]|[E{I|L}]|[KN]}P[PG]{I|L}[HD]VP{I|L};{[QN]|[E{I|L}]|[KN]}PA{I|L}T[W{M(Oxidation (M))|F}]P{I|L};{[QN]|[E{I|L}]|[KN]}P{I|L}TA[W{M(Oxidation (M))|F}]P{I|L} 4.6504;3.9914;3.7528;3.7199;3.3365;3.2298;3.1992;3.1992;3.0938;3.0609 -;-;-;-;-;-;-;-;-;- 2495 1 1.442 81007.5 0.5099999904632568 13175 5073 18247 HBL1_DMSO_200M_050219_2,18250 HBL1_DMSO_200M_050219_2,18250,ITIPEIATSEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18251 97.787 800.0 145170.0 25 0 9957.7 -1 0 128 948.445849861736 1894.877146790272 2 948.4462158083916 MULTI CID FTMS 0 0 0 18247 101091.5078125 0.3077435854016904 3 -0.115478515625 4 4 {[QN]|[E{I|L}]|[KN]}YA{I|L}M{I|L} 7 -1 40.789 0.0 0.0 2.1526 0.0 0.0 0.0 1058.4263160620096 1058.4263160620096 21.41828281580917 0.0 0.0 0.0 0 0.0 0.958607314841775 0.566901560044258 0.7302046884880937 {[QN]|[E{I|L}]|[KN]}YA{I|L}M{I|L} 2.1526 - 1796 1 1.442 77996.5 0.4900000095367431 13176 5073 18247 HBL1_DMSO_200M_050219_2,18251 HBL1_DMSO_200M_050219_2,18251, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18252 97.796 463.0 254000.0 25 0 19957.0 + 30686 RFPPTPPLF 9 123 536.30378978593 0 536.3030883669853 PEAK CID FTMS 0 0 0 18247 96968.5390625 0.4423933274451979 7 -0.2139205932617187 5 Unmodified _RFPPTPPLF_ chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A;ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A 24.020572477871973 0.1646235280836931 4 P 1 8 11.99 0.0 0.0 1.1199 0.0 0.0 598.3241005049362 372.1930065714285 970.5171070763648 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + P 1.1199 + + 73 + 1 1.442 100384.4 1.0 13177 5073 18247 HBL1_DMSO_200M_050219_2,18252 HBL1_DMSO_200M_050219_2,18252,RFPPTPPLF False True RFPPTPPLF 97.795658 536.303088366985 16754296.5 18247.0 nc|ENSG00000119866|Q9H165-6|BCL11A;;nc|ENSG00000119866|Q9H165-2|BCL11A;;ENSG00000119866|ENST00000642384|BCL11A;;chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A 6.664694945017497 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18253 97.802 326.0 312930.0 25 0 35893.0 27583 PLDDSAITPM 10 127 530.2528066831832 1058.4910604331662 2 530.2538329958916 MULTI CID FTMS 0 0 0 18247 94162.796875 0.5892744449266176 -12 1.3844757080078125 6 Unmodified _PLDDSAITPM_ ENSG00000102786|ENST00000311234|INTS6;nc|ENSG00000102786|Q9UL03-3|INTS6 21.74664581756881 0.480091245866545 4 [{I|L}P]M[QT]M{I|L}{I|L} 8 7 30.468 0.0 0.0 2.8784 0.0 0.0 0.0 127.98319140463344 127.98319140463344 8.652340397648857 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.6109243748081782 [{I|L}P]M[QT]M{I|L}{I|L} 2.8784 - 558 1 1.442 86980.6 1.0 13178 5073 18247 HBL1_DMSO_200M_050219_2,18253 HBL1_DMSO_200M_050219_2,18253,PLDDSAITPM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18254 97.815 800.0 115250.0 25 0 10959.0 21697 LPLRLLVP 8 95 460.8180927148848 919.6216324965696 2 460.8187133669853 MULTI CID FTMS 0 0 0 18247 92563.75 0.2221032488722526 5 -0.1934280395507812 7 Unmodified _LPLRLLVP_ ENSG00000136231|ENST00000258729|IGF2BP3 30.22481116460888 0.4082965392918993 4 {I|L}PPV{I|L}[R{I|L}]{I|L} 8 4 + 69.373 0.0 0.0 7.5437 7.5437 94.115 0.0 0.0 0.0 53.14112819170983 10.177287669604311 10.177287669604311 17.501225267834002 0 0.4247425010840047 2.0 0.0 0.0 {I|L}PPV{I|L}[R{I|L}]{I|L};{I|L}P{I|L}[VP][R{I|L}]{I|L};{I|L}{I|L}P[VP][R{I|L}]{I|L} 7.5437;5.6406;2.6766 -;-;- 133 + 1 1.442 77937.4 0.3899999856948852 13179 5073 18247 HBL1_DMSO_200M_050219_2,18254 HBL1_DMSO_200M_050219_2,18254,LPLRLLVP False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18256 97.821 65.0 1085800.0 25 0 150880.0 + 27764 PLPLPPLAL 9 79 465.8047078018629 929.5948626705258 2 465.8049499392509 MULTI CID FTMS 0 0 0 18255 918833.375 0.7233352866534116 -11 1.291290283203125 1 Unmodified _PLPLPPLAL_ ENST00000591090.5_1_19:12859061-12859118:+|nuORF 56.04830969593885 0.0282699710924866 4 {I|L}{I|L}PPPP{I|L}A{I|L} 9 2 + 55.952 0.0 0.0 6.019 6.019 89.319 0.0 0.0 0.0 28.78530614985209 12.580240701170167 12.580240701170167 20.00508444608478 0 1.309894379144197 2.0 0.0 0.0 {I|L}{I|L}PPPP{I|L}A{I|L};{I|L}{I|L}[YK]P{I|L}A{I|L} 6.019;3.867 -;- 269 + 1 1.442 58974.7 1.0 13180 5074 18255 HBL1_DMSO_200M_050219_2,18256 HBL1_DMSO_200M_050219_2,18256,PLPLPPLAL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18257 97.829 440.0 209300.0 25 0 22075.0 + 39404 VALARALFI 9 88 487.3132516557011 972.6119503782022 2 487.3134948611259 MULTI CID FTMS 0 0 0 18255 166379.03125 0.4457732941044477 3 -0.0886688232421875 2 Unmodified _VALARALFI_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 61.357469665136826 0.0253304979873734 4 {[VA]|[{I|L}G]}{I|L}ARA{I|L}{M(Oxidation (M))|F}{I|L} 9 0 + 58.782 0.0 0.0 6.0437 6.0437 88.984 0.0 0.0 0.0 6.755143367341603 12.21726222832956 6.755143367341603 16.760912590556813 0 2.024227503252014 1.6989700043360187 0.0 0.0 + + {[VA]|[{I|L}G]}{I|L}ARA{I|L}{M(Oxidation (M))|F}{I|L};{I|L}{I|L}GARA{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]VARA{I|L}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}G{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KKV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KT]KKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KKV{I|L} 6.0437;4.3204;4.0748;2.8366;0.25802;0.21916 +;-;-;-;-;- + 291 1 1.442 73790.7 1.0 13181 5074 18255 HBL1_DMSO_200M_050219_2,18257 HBL1_DMSO_200M_050219_2,18257,VALARALFI True True VALARALFI 97.828672 487.313494861126 7875799.5 18255.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2 4.490172068277995 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18259 97.833 40.0 1109500.0 25 0 75455.0 + 1511 ALHSWFQTL 9 90 551.7856608971621 1101.556768861124 2 551.7849609255791 MULTI CID FTMS 0 0 0 18258 719294.1875 0.8792740979303566 -2 0.083892822265625 1 Unmodified _ALHSWFQTL_ ENSG00000166986|ENST00000262027|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF;nc|ENSG00000166986|P56192-2|MARS1 51.629811660486645 0.0367964933207742 4 [{I|L}A]HSW{M(Oxidation (M))|F}QT{I|L} 9 0 + 54.97 0.0 0.0 4.9902 4.9902 81.403 0.0 0.0 0.0 10.853259568331843 22.341310985325983 10.853259568331843 9.208187539523747 0 0.8182503180159344 0.958607314841775 1.610924374808178 0.0 + + [{I|L}A]HSW{M(Oxidation (M))|F}QT{I|L};[{I|L}A]HSW{M(Oxidation (M))|F}[AG]T{I|L};[HS][{I|L}A]W{M(Oxidation (M))|F}QT{I|L};[HS][{I|L}A]W{M(Oxidation (M))|F}[AG]T{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}H[{I|L}A]{M(Oxidation (M))|F}QT{I|L};[HS]W[{I|L}A]{M(Oxidation (M))|F}QT{I|L};[H{I|L}]Q{M(Oxidation (M))|F}W{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};[H{I|L}]Q{M(Oxidation (M))|F}S{M(Oxidation (M))|F}[NP]{I|L};[VP]E{[WT]|[RM]}EQT{I|L};[H{I|L}]Q{M(Oxidation (M))|F}S{M(Oxidation (M))|F}QPV 4.9902;4.1543;2.8509;2.015;1.9152;1.8273;1.5281;1.4984;1.4857;1.2412 +;-;-;-;-;-;-;-;-;- + 830 1 1.442 40385.7 1.0 13182 5075 18258 HBL1_DMSO_200M_050219_2,18259 HBL1_DMSO_200M_050219_2,18259,ALHSWFQTL True True ALHSWFQTL 97.833468 551.784960925579 7228302.5 18258.0 nc|ENSG00000166986|P56192-2|MARS1;;ENST00000447721.6_1_12:57881873-57905922:+|nuORF;;ENSG00000166986|ENST00000262027|MARS1 7.9340667724609375 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18260 97.836 100.0 831190.0 25 0 98922.0 + 20041 LIPDIDLKL 9 85 520.3231433229602 1038.6317337127202 2 520.3238403201103 MULTI CID FTMS 0 0 0 18258 555811.8125 0.3186345284310635 -16 1.6845550537109375 2 Unmodified _LIPDIDLKL_ ENSG00000173473|ENST00000254480|SMARCC1 26.268140514670165 0.1969607489560049 4 {I|L}{I|L}PD{I|L}D{I|L}K{I|L} 9 0 + 58.421 0.0 0.0 5.6248 5.6248 86.538 0.0 0.0 0.0 20.52887198244136 12.887955392469692 12.887955392469692 13.253800256993957 0 0.3807196863200844 2.0 0.0 0.0 + + {I|L}{I|L}PD{I|L}D{I|L}K{I|L};{I|L}{I|L}{I|L}[DP]D{I|L}K{I|L} 5.6248;4.3488 +;- + 171 + 1 1.442 70053.7 1.0 13183 5075 18258 HBL1_DMSO_200M_050219_2,18260 HBL1_DMSO_200M_050219_2,18260,LIPDIDLKL False True LIPDIDLKL 97.835636 520.32384032011 125638616.0 18258.0 ENSG00000173473|ENST00000254480|SMARCC1 4.089491089185079 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18261 97.846 595.0 199280.0 25 0 23586.0 20001 LILKSEHI 8 105 476.7955590019109 951.5765650706218 2 476.7954894900322 MULTI CID FTMS 0 0 0 18258 138754.46875 0.6114423902110675 -5 0.3856124877929687 3 Unmodified _LILKSEHI_ ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE 18.13498045792455 0.6430038125133779 4 {I|L}{I|L}PPK 5 6 42.531 0.0 0.0 4.4695 0.0 0.0 0.0 400.1874178522094 400.1874178522094 30.31234684152075 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L}PPK 4.4695 - 113 + 1 1.442 93232.9 1.0 13184 5075 18258 HBL1_DMSO_200M_050219_2,18261 HBL1_DMSO_200M_050219_2,18261,LILKSEHI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18262 97.851 244.0 315340.0 25 0 38563.0 + 19641 LGFSFVVSI 9 94 484.777385585614 967.540218238028 2 484.7775146365166 MULTI CID FTMS 0 0 0 18258 130273.453125 0.7398038186916082 -5 0.3856124877929687 4 Unmodified _LGFSFVVSI_ REV__ENST00000461705.1_1_2:27806248-27806368:+|nuORF 16.942295170755138 0.3780752226737986 4 {[TV]|[{I|L}S]}[KP]W{I|L}[QP] 8 -1 + 28.204 0.0 0.0 2.9151 2.9151 73.507 0.0 0.0 0.0 8.022109972659024 6.680760084226662 6.680760084226662 9.030899869919434 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}[KP]W{I|L}[QP];{I|L}A[HM][RD]{I|L}{I|L};{I|L}{I|L}[QA]W{I|L}[QP];[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}RM[QP];[{I|L}P][KS]W{I|L}[QP];[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}{[CA]|SS}{I|L}[QP];{I|L}A[YG][YR]{I|L}{I|L};{[TV]|[{I|L}S]}[KP]N[KG][QP];{I|L}[YQ][YR]{I|L}{I|L};{I|L}{I|L}[QA]N[KG][QP] 2.9151;1.9817;1.8815;1.6706;1.4194;1.3355;1.1082;1.0843;0.75688;0.050785 -;-;-;-;-;-;-;-;-;- 252 1 1.442 65700.8 1.0 13185 5075 18258 HBL1_DMSO_200M_050219_2,18262 HBL1_DMSO_200M_050219_2,18262,LGFSFVVSI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18263 97.86 551.0 236700.0 25 0 20004.0 + + 40512 SQLNIWIRV 9 147 564.8294135803097 1127.6442742274194 2 564.8301879763603 MULTI CID FTMS 0 0 0 18258 126860.703125 1.0 0 0.0 5 Unmodified _VIVDQELLSL_ nc|ENSG00000114796|Q6TFL4-2|KLHL24;ENSG00000114796|ENST00000242810|KLHL24 29.081581746732265 0.3152867722954398 4 {[QS]|[NT]}{I|L}N{I|L}[Q{I|L}]{I|L}S{I|L} 10 -1 + 41.933 0.0 0.0 3.7187 3.7187 68.267 0.0 0.0 0.0 7.269987279362624 2.9717533482888 2.9717533482888 2.914230059397888 0 1.0629529932484498 0.0 0.2887254899964357 0.0 {[QS]|[NT]}{I|L}N{I|L}[Q{I|L}]{I|L}S{I|L};{[QS]|[NT]}{I|L}N{I|L}W[RV]{I|L};{[QS]|[NT]}{I|L}N{I|L}W{I|L}RV;{[QS]|[NT]}{I|L}N{I|L}[Q{I|L}]{I|L}TV;{[QS]|[NT]}{I|L}GG{I|L}[Q{I|L}]{I|L}S{I|L};{[QS]|[NT]}{I|L}GG{I|L}W[RV]{I|L};{[QS]|[NT]}{I|L}GG{I|L}W{I|L}RV;{[QS]|[NT]}{I|L}GG{I|L}[Q{I|L}]{I|L}TV 3.7187;3.4602;3.4551;2.9375;2.9059;2.6436;2.6385;2.1248 -;-;-;-;-;-;-;- 602 + 1 1.442 106513.9 1.0 13186 5075 18258 HBL1_DMSO_200M_050219_2,18263 HBL1_DMSO_200M_050219_2,18263,VIVDQELLSL False False SQLNIWIRV 97.860257 564.83018797636 1272950.625 18258.0 nc|ENSG00000114796|Q6TFL4-2|KLHL24;;ENSG00000114796|ENST00000242810|KLHL24 4.843188762664795 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18265 97.865 14.0 3942600.0 25 0 529640.0 + 4031 DALRSILTI 9 65 501.3032265673282 1000.5919002014564 2 501.3035461306572 MULTI CID FTMS 0 0 0 18264 4145257.25 0.0385332101822053 7 -0.1741180419921875 1 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 43.77239144664712 0.0547478964384323 4 [{I|L}T]{I|L}{[NV]|[RG]}D{I|L}T{I|L} 9 4 + 65.072 0.0 0.0 6.5033 6.5033 82.433 0.0 0.0 0.0 4.771212547196626 16.478174818886373 4.771212547196626 4.771212547196626 0 0.9247425010840048 1.5228787452803376 0.7742275032520141 0.0 [{I|L}T]{I|L}{[NV]|[RG]}D{I|L}T{I|L};{[DA]|[EG]}[R{I|L}]S{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}{I|L}DT{I|L};[{I|L}T]{I|L}{[NV]|[RG]}S{I|L}E{I|L};[{I|L}T]{I|L}{[NV]|[RG]}{I|L}SE{I|L};[{I|L}T]{I|L}{[NV]|[RG]}N[KS]{I|L} 6.5033;6.0265;5.4555;5.0526;4.6549;3.9537 -;+;-;-;-;- + 201 1 1.442 44706.1 1.0 13187 5076 18264 HBL1_DMSO_200M_050219_2,18265 HBL1_DMSO_200M_050219_2,18265,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18266 97.866 29.0 2294500.0 25 0 365140.0 + 21458 LPHLPSLEI 9 85 509.8000880035055 1017.585623073811 2 509.8004638552666 MULTI CID FTMS 0 0 0 18264 1858077.0 0.7228279686263648 5 -0.12921142578125 2 Unmodified _LPHLPSLEI_ ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2 53.57557251787612 0.0325303259649373 4 [H{I|L}]P{I|L}[PS]{I|L}E{I|L} 9 2 + 65.582 0.0 0.0 6.4449 6.4449 81.551 0.0 0.0 0.0 8.239087409443187 16.478174818886373 8.239087409443187 4.286662482156345 0 0.6989700043360187 1.2218487496163564 0.75 0.0 [H{I|L}]P{I|L}[PS]{I|L}E{I|L};[H{I|L}]PS[{I|L}P]{I|L}E{I|L};[{I|L}P]H{I|L}[PS]{I|L}E{I|L};[H{I|L}]P{I|L}[PS]E{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[PS]{I|L}E{I|L};[{I|L}P]HS[{I|L}P]{I|L}E{I|L};[H{I|L}]PS[{I|L}P]E{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S[{I|L}P]{I|L}E{I|L};[{I|L}P]H{I|L}[PS]E{I|L}{I|L};[H{I|L}]P{I|L}{[ES]|[DT]|[{I|L}C]}P{I|L}{I|L} 6.4449;6.0236;5.6352;5.3869;5.3225;5.2139;4.9656;4.9012;4.5772;4.5006 -;-;+;-;-;-;-;-;-;- + 497 1 1.442 56268.1 1.0 13188 5076 18264 HBL1_DMSO_200M_050219_2,18266 HBL1_DMSO_200M_050219_2,18266,LPHLPSLEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18267 97.868 64.0 819690.0 25 0 148280.0 + -1 SLLEHWCAW 9 84 601.2772920853854 1200.5400312375707 2 601.2781249880791 MULTI CID FTMS 0 0 0 18264 753367.1875 0.2412348623253921 6 -0.1377716064453125 3 Carbamidomethyl (C) _SLLEHWC(Carbamidomethyl (C))AW_ REV__DMD|p.S1492Efs*19|1|0.36|ENSG00000198947|chrX:32389546-32389547|-/T|frameshift_variant;REV__ENSG00000198947|ENST00000357033|DMD;REV__nc|ENSG00000198947|P11532-11|DMD;REV__nc|ENSG00000198947|P11532-4|DMD;REV__nc|ENSG00000198947|P11532|DMD 11.640296217721598 0.521594087909532 4 {[TV]|[{I|L}S]}{I|L}E 4 -1 27.809 0.0 0.0 2.3164 0.0 0.0 0.0 755.2753882534488 755.2753882534488 5.792308853759817 0.0 0.0 0.0 0 0.0 2.0 0.5044321917401079 0.0 {[TV]|[{I|L}S]}{I|L}E 2.3164 + + 214 1 1.442 42879.6 1.0 13189 5076 18264 HBL1_DMSO_200M_050219_2,18267 HBL1_DMSO_200M_050219_2,18267,SLLEHWCAW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18268 97.873 294.0 214030.0 25 0 29638.0 + 34780 SQDIYLLPF 9 93 548.2898399185785 1094.565126903957 2 548.2907592654228 MULTI CID FTMS 0 0 0 18264 149534.5 0.1759926523837052 -9 0.8596954345703125 4 Unmodified _SQDIYLLPF_ REV__chr7:45060308-45063918|11|11.55|0.43|4.75|+|1|TE_info:L1MCa,L1MCa_dup3078,L1,LINE,donor,-,45059766,45060308|None,CCM2|6 15.847184025352805 0.4077185912009129 4 [Y{I|L}]{I|L} 3 -1 22.676 0.0 0.0 2.0717 0.0 0.0 0.0 702.310587020445 702.310587020445 1.9184029665255764 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [Y{I|L}]{I|L} 2.0717 + + 136 1 1.442 56022.1 1.0 13190 5076 18264 HBL1_DMSO_200M_050219_2,18268 HBL1_DMSO_200M_050219_2,18268,SQDIYLLPF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18269 97.876 161.0 625990.0 25 0 56419.0 + + -1 AQLDELMAHL 10 108 570.2771501609695 1138.539747388739 2 570.7889282107353 MULTI CID FTMS 0 0 0 18264 148443.75 0.441264296245129 -11 1.12115478515625 5 Oxidation (M) _LPLATSPM(Oxidation (M))YM_ nc|ENSG00000110031|O60711-2|LPXN;ENSG00000110031|ENST00000395074|LPXN;ENST00000529915.1_1_11:58322280-58343350:-|nuORF 7.289230182591677 0.6929195370588109 4 {I|L}DE{I|L}MAH{I|L} 8 -1 36.201 0.0 0.0 3.1796 0.0 0.0 198.06968190263905 0.0 198.06968190263905 0.0 26.112603295991192 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {I|L}DE{I|L}MAH{I|L} 3.1796 - 265 + 1 1.442 80469.1 1.0 13191 5076 18264 HBL1_DMSO_200M_050219_2,18269 HBL1_DMSO_200M_050219_2,18269,LPLATSPMYM False False AQLDELMAHL 97.876367 570.788928210735 1486490.75 18264.0 nc|ENSG00000110031|O60711-2|LPXN;;ENSG00000110031|ENST00000395074|LPXN;;ENST00000529915.1_1_11:58322280-58343350:-|nuORF 6.361335595448812 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18270 97.89 800.0 243230.0 25 0 15613.0 -1 0 108 1186.5580782050745 2371.1016034769486 2 1187.064746081829 MULTI CID FTMS 0 0 0 18264 117333.6484375 0.8131557512495089 6 -0.1377716064453125 6 4 [QP][QT]PPPP{[HG]|PP}A 11 -1 46.902 0.0 0.0 1.9781 0.0 0.0 0.0 1260.5092320323906 1260.5092320323906 11.60940144168078 0.0 0.0 0.0 0 1.0 0.0 0.5994850021680094 1.2447026752325154 [QP][QT]PPPP{[HG]|PP}A 1.9781 - 8048 1 1.442 119231.1 0.5 13192 5076 18264 HBL1_DMSO_200M_050219_2,18270 HBL1_DMSO_200M_050219_2,18270, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18271 97.904 800.0 219980.0 25 0 25007.0 + 21283 LPEDLYHLI 9 141 556.8030547361668 1111.5915565391335 2 556.8039428591728 MULTI CID FTMS 0 0 0 18264 113601.171875 0.2062434698562665 -10 0.99493408203125 7 Unmodified _LPEDLYHLI_ ENSG00000110700|ENST00000525634|RPS13;ENST00000458227.1_1_2:25191966-25192092:-|nuORF;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000531908.5_1_11:17095982-17097186:-|nuORF 92.8221339359638 0.0138398038803217 4 {I|L}PED{I|L}YH{I|L}{I|L} 9 0 + 94.837 0.0 0.0 8.5316 8.5316 96.778 0.0 0.0 0.0 53.49562299365054 13.46787486224656 13.46787486224656 23.623752496410773 0 2.3494850021680094 1.6989700043360187 0.75 0.0 + + {I|L}PED{I|L}YH{I|L}{I|L};[{I|L}P]EDYH{I|L}{I|L}{I|L};[EP]{I|L}DYH{I|L}{I|L}{I|L};[EP]D{I|L}YH{I|L}{I|L}{I|L};[{I|L}P]EDY{I|L}H{I|L}{I|L};[EP]{I|L}DY{I|L}H{I|L}{I|L};[EP]D{I|L}Y{I|L}H{I|L}{I|L};{I|L}P[C(Carbamidomethyl (C))K][MT]H{I|L}{I|L};{I|L}P[C(Carbamidomethyl (C))M][KT]H{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}PDYH{I|L}{I|L}{I|L} 8.5316;6.4064;6.3823;6.271;6.2274;6.2033;6.092;5.4925;5.4465;5.3873 +;-;-;-;-;-;-;-;-;- + 2865 + 1 1.442 138865.6 0.9900000095367432 13193 5076 18264 HBL1_DMSO_200M_050219_2,18271 HBL1_DMSO_200M_050219_2,18271,LPEDLYHLI True True LPEDLYHLI 97.904082 556.803942859173 9154701.0 18264.0 ENST00000458227.1_1_2:25191966-25192092:-|nuORF;;ENSG00000110700|ENST00000525634|RPS13;;ENST00000531908.5_1_11:17095982-17097186:-|nuORF;;ENST00000526895.5_1_11:17095982-17099246:-|nuORF 5.702801863352458 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18273 97.914 336.0 148740.0 25 0 14137.0 23282 LSWNKTVEL 9 93 545.3000667161175 1088.585580499035 2 545.8018676638603 MULTI CID FTMS 0 0 0 18272 80901.953125 0.5219774459087517 7 -0.17108154296875 1 Unmodified _LSWNKTVEL_ ENSG00000196358|ENST00000393229|NTNG2;nc|ENSG00000196358|Q96CW9-2|NTNG2 26.268140514670165 0.1969607489560049 4 {[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L} 9 3 + 29.056 0.0 0.0 2.6691 2.6691 69.562 0.0 0.0 0.0 5.177391056279266 6.735354280472258 5.177391056279266 5.177391056279266 0 0.6237125054200234 0.7695510786217261 0.5 0.0 {[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}TVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{I|L}TVE{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KS]V[Q{I|L}];[C(Carbamidomethyl (C))K][RV]K{[WN]|[YH]}V;{[SA]|[TG]}E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RK]E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VT{I|L}[WD]PV;{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}[KS]V[Q{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{[QG]|[NA]}K{[WN]|[YH]}V;[{I|L}T][WD][KS]V[Q{I|L}];{[WT]|[RM]}[KQ]K{[WN]|[YH]}V 2.6691;2.1935;1.1828;1.1613;0.95376;0.77087;0.70716;0.63396;0.62722;0.59192 -;-;-;-;-;-;-;-;-;- 299 1 1.442 44546.9 1.0 13194 5077 18272 HBL1_DMSO_200M_050219_2,18273 HBL1_DMSO_200M_050219_2,18273,LSWNKTVEL False True RFPDLTVEL 97.914071 545.80186766386 43457406.0 18272.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-2|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 4.702519257863362 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18274 97.917 157.0 540820.0 25 0 58034.0 + 31060 RLIESLFTIQ 10 82 610.3556580666466 1218.696763200093 2 610.3561889529228 MULTI CID FTMS 0 0 0 18272 323602.40625 0.7461460121489929 -5 0.1906967163085937 2 Unmodified _RLIESLFTIQ_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 35.61225514009592 0.2039006631696762 4 ES{I|L}{M(Oxidation (M))|F}T{I|L}Q 7 3 52.414 0.0 0.0 4.3008 0.0 0.0 382.2700672834 0.0 382.2700672834 0.0 29.39851049298128 0.0 0.0 0 1.0 0.0 0.75 0.0 + ES{I|L}{M(Oxidation (M))|F}T{I|L}Q 4.3008 + + 201 1 1.442 69074.2 1.0 13195 5077 18272 HBL1_DMSO_200M_050219_2,18274 HBL1_DMSO_200M_050219_2,18274,RLIESLFTIQ False True RLIESLFTIQ 97.917198 610.356188952923 3971540.25 18272.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 6.395585695902507 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18275 97.926 524.0 184250.0 25 0 29739.0 + 44785 YPLTQLVVV 9 120 516.3104467886293 1030.6063406440585 2 516.3110229372978 MULTI CID FTMS 0 0 0 18272 100467.765625 0.4019843467137082 -8 0.6227188110351562 3 Unmodified _YPLTQLVVV_ ENSG00000140526|ENST00000352732|ABHD2 37.97399986684836 0.0865783450051559 4 [{I|L}T]PQY{I|L}VVV 9 4 + 59.719 0.0 0.0 5.7945 5.7945 75.309 0.0 0.0 0.0 2.218487496163561 7.147642715192504 2.218487496163561 2.218487496163561 0 0.5 1.0457574905606752 1.860924374808178 0.0 [{I|L}T]PQY{I|L}VVV;[{I|L}P]TQY{I|L}VVV;[{I|L}T]QPY{I|L}VVV;[{I|L}T]PQ{I|L}YVVV;[{I|L}T]PYQ{I|L}VVV;[{I|L}T]P[AG]Y{I|L}VVV;[{I|L}P]TQ{I|L}YVVV;[{I|L}P]TYQ{I|L}VVV;[{I|L}P]T[AG]Y{I|L}VVV;[{I|L}T]QP{I|L}YVVV 5.7945;5.5792;5.3342;4.9621;4.9194;4.901;4.7469;4.7042;4.6858;4.5018 -;-;-;-;-;-;-;-;-;- 1914 1 1.442 76418.3 1.0 13196 5077 18272 HBL1_DMSO_200M_050219_2,18275 HBL1_DMSO_200M_050219_2,18275,YPLTQLVVV True True YPLTQLVVV 97.92643 516.311022937298 3723834.75 18272.0 ENSG00000140526|ENST00000352732|ABHD2 4.806437333424886 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18276 97.938 676.0 238720.0 25 0 14902.0 + 45687 YWPDVIHSF 9 156 582.2799979196994 1162.5454429061988 2 582.2803832888603 MULTI CID FTMS 0 0 0 18272 88666.71875 0.6876753295368216 -4 0.1593093872070312 4 Unmodified _YWPDVIHSF_ ENSG00000026297|ENST00000508775|RNASET2;ENST00000028008.9_1_6:167343078-167365992:-|nuORF;ENST00000358165.7_1_6:167352234-167370622:-|nuORF;ENST00000496851.6_1_6:167347386-167366008:-|nuORF;ENST00000499370.6_1_6:167347461-167366008:-|nuORF 39.957323273325 0.0756908302845263 4 [WY]PDV{I|L}HS{M(Oxidation (M))|F} 9 0 + 53.783 0.0 0.0 4.6263 4.6263 82.6 0.0 0.0 0.0 28.16470412632824 8.728721920568248 8.728721920568248 13.996875253960638 0 0.3807196863200844 2.0 0.7614393726401688 0.0 + + [WY]PDV{I|L}HS{M(Oxidation (M))|F};[WY]PDV{I|L}{[QG]|[NA]}W;[WY]PDV[HA]Y{I|L};[WY]PDV{[{M(Oxidation (M))|F}H]|[RQ]}S{I|L};[WY]PD{M(Oxidation (M))|F}[HV]S{I|L};[WY]YW[{M(Oxidation (M))|F}V]S{I|L};[WY][{I|L}V]S{M(Oxidation (M))|F}YW;[WY]PDVV[HT]{M(Oxidation (M))|F};[WY]PDV{[{M(Oxidation (M))|F}H]|[RQ]}TV;[WY]PDVV[QA]W 4.6263;3.4223;3.3447;3.1971;3.0896;2.9669;2.887;2.6859;2.664;2.5621 +;-;-;-;-;-;-;-;-;- + 3804 + 1 1.442 121590.0 1.0 13197 5077 18272 HBL1_DMSO_200M_050219_2,18276 HBL1_DMSO_200M_050219_2,18276,YWPDVIHSF True True YWPDVIHSF 97.938203 582.28038328886 1599331.25 18272.0 ENST00000499370.6_1_6:167347461-167366008:-|nuORF;;ENST00000496851.6_1_6:167347386-167366008:-|nuORF;;ENST00000028008.9_1_6:167343078-167365992:-|nuORF;;ENST00000358165.7_1_6:167352234-167370622:-|nuORF;;ENSG00000026297|ENST00000508775|RNASET2 3.9967778523763022 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18278 97.955 800.0 111590.0 25 0 10501.0 + 26665 NYIEFTRIL 9 100 584.8219918328241 1167.629430732448 2 584.8226806521416 MULTI CID FTMS 0 0 0 18277 76328.4296875 0.3535484689494492 6 -0.136962890625 1 Unmodified _NYIEFTRIL_ ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B 41.95555342248728 0.0647214845423414 4 [YN]{I|L}E{M(Oxidation (M))|F}TR{I|L}{I|L} 9 0 + 67.1 0.0 0.0 5.7467 5.7467 89.043 0.0 0.0 0.0 50.95638552233424 6.104655695280563 6.104655695280563 28.454124839101887 0 1.242992819099939 2.0 0.4247425010840047 0.0 + + [YN]{I|L}E{M(Oxidation (M))|F}TR{I|L}{I|L};[YN]{I|L}[KQ][YN]{I|L}{I|L};[YN][KQ]{I|L}[YN]{I|L}{I|L};[Y{I|L}]N[KQ][YN]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[YQ]{I|L}[YN]{I|L}{I|L};[Y{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[YN]{I|L}{I|L} 5.7467;3.3098;2.1043;1.5266;0.65363;0.32118 +;-;-;-;-;- + 177 + 1 1.442 70728.7 0.4399999976158142 13198 5078 18277 HBL1_DMSO_200M_050219_2,18278 HBL1_DMSO_200M_050219_2,18278,NYIEFTRIL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18281 97.969 466.0 224960.0 25 0 40527.0 + 13224 HGVFLPLV 8 97 441.26567287132445 880.5167928094489 2 441.2658264040947 MULTI CID FTMS 0 0 0 18280 177961.296875 0.7701095589271404 -1 0.0040664672851562 1 Unmodified _HGVFLPLV_ ENSG00000100647|ENST00000342745|SUSD6;ENST00000556993.1_1_14:70125309-70170323:+|nuORF 41.81723621529253 0.2038889569391319 4 {I|L}HWV 4 6 22.959 0.0 0.0 2.6074 0.0 0.0 327.2153605711682 0.0 327.2153605711682 0.0 8.502480183341632 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}HWV 2.6074 - 69 + 1 1.442 92203.3 1.0 13199 5080 18280 HBL1_DMSO_200M_050219_2,18281 HBL1_DMSO_200M_050219_2,18281,HGVFLPLV False True HGVFLPLV 97.969498 441.265826404095 2116685.0 18280.0 ENST00000556993.1_1_14:70125309-70170323:+|nuORF;;ENSG00000100647|ENST00000342745|SUSD6 4.826107660929362 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18282 97.981 671.0 221630.0 25 0 30149.0 + 23094 LSMLIGTSV 9 118 460.7610697284564 919.5075865237128 2 460.7608825564384 MULTI CID FTMS 0 0 0 18280 179333.9375 0.231983076719089 -10 0.5156402587890625 2 Unmodified _LSMLIGTSV_ REV__ENSG00000130943|ENST00000253255|PKDREJ 23.1484247019978 0.2366544122328345 4 [{I|L}P]DV[HN]{I|L}{I|L} 8 -1 + 35.851 0.0 0.0 3.899 3.899 78.61 0.0 0.0 0.0 10.0 7.919562702124452 7.919562702124452 10.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}P]DV[HN]{I|L}{I|L};[VP]EV[HN]{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SE[KS]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}PV[HN]{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SK{[ES]|[DT]|[{I|L}C]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[MT][KS]{I|L}{I|L} 3.899;2.8114;2.1835;1.9154;1.4517;0.96374 -;-;-;-;-;- 241 1 1.442 116285.1 1.0 13200 5080 18280 HBL1_DMSO_200M_050219_2,18282 HBL1_DMSO_200M_050219_2,18282,LSMLIGTSV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18283 97.989 469.0 148410.0 25 0 8405.8 + 20518 LLLPTEPW 8 96 323.52132885726263 967.542157171988 3 323.5210143923759 MULTI CID FTMS 0 0 0 18280 155954.6875 1.0 0 0.0 3 Unmodified _LLLPTEPW_ REV__ENSG00000102595|ENST00000376747|UGGT2;REV__nc|ENSG00000102595|Q9NYU1-2|UGGT2 13.50788311687929 0.7113601687236069 4 {I|L}{I|L}P 3 -1 43.984 0.0 0.0 4.546 0.0 0.0 0.0 641.2888170234359 641.2888170234359 29.38039076304328 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 {I|L}{I|L}P 4.546 + + 16 + 1 1.442 59431.3 1.0 13201 5080 18280 HBL1_DMSO_200M_050219_2,18283 HBL1_DMSO_200M_050219_2,18283,LLLPTEPW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18285 97.995 48.0 1881200.0 25 0 180810.0 29326 QILTVLPRL 9 97 526.8449290093401 1051.6753050854802 2 526.8454467654228 MULTI CID FTMS 0 0 0 18284 726247.5 0.9737484231003418 3 -0.0857009887695312 1 Unmodified _QILTVLPRL_ ENST00000509144.2_1_8:106809432-107072670:-|nuORF;ENST00000520078.5_1_8:106810397-107072670:-|nuORF;ENST00000520594.5_1_8:106799777-107072670:-|nuORF 49.93300154707207 0.0405168250806675 4 [Q{I|L}]{I|L}S{I|L}{I|L}P{I|L}R 9 4 + 66.826 0.0 0.0 6.3542 6.3542 81.858 0.0 0.0 0.0 40.628011649836594 10.182699056112613 10.182699056112613 4.771212547196626 0 0.7742275032520141 2.0 0.3494850021680094 0.7059771852360797 [Q{I|L}]{I|L}S{I|L}{I|L}P{I|L}R;[Q{I|L}]{I|L}{I|L}S{I|L}P{I|L}R;[Q{I|L}]{I|L}P{I|L}TV{I|L}R;[Q{I|L}]{I|L}{I|L}PTV{I|L}R;KA{I|L}E{I|L}{I|L}P{I|L}R 6.3542;5.9006;5.0941;4.9267;4.3082 -;-;-;-;- 272 + 1 1.449 73853.8 1.0 13202 5081 18284 HBL1_DMSO_200M_050219_2,18285 HBL1_DMSO_200M_050219_2,18285,QILTVLPRL True True QALELPLRI 97.994721 526.845446765423 7851586.0 18284.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENSG00000132182|ENST00000254508|NUP210 1.350488265355428 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18286 97.998 169.0 359830.0 25 0 52881.0 + 9865 FPFGYVSNI 9 90 522.2631012076528 1042.5116494821054 2 522.2640258669853 MULTI CID FTMS 0 0 0 18284 349530.65625 0.9716749115109748 11 -0.3450393676757812 2 Unmodified _FPFGYVSNI_ ENSG00000159259|ENST00000314103|CHAF1B;ENST00000481458.1_1_21:37771819-37785123:+|nuORF 42.96799951952854 0.0591636306142405 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}V 6 5 39.385 0.0 0.0 3.7779 0.0 0.0 0.0 329.1468791317814 329.1468791317814 18.363357733952643 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}V 3.7779 - 513 1 1.449 54390.9 1.0 13203 5081 18284 HBL1_DMSO_200M_050219_2,18286 HBL1_DMSO_200M_050219_2,18286,FPFGYVSNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18288 98.004 178.0 647980.0 25 0 50529.0 + 38792 TVELETDGYL 10 131 570.2771501609695 1138.539747388739 2 570.2780639529228 MULTI CID FTMS 0 0 0 18287 145291.140625 0.2763726176596084 -8 0.1826095581054687 1 Unmodified _TVELETDGYL_ REV__ENSG00000132670|ENST00000399903|PTPRA;REV__nc|ENSG00000132670|P18433-6|PTPRA 13.90604991867851 0.6142120002215601 4 V[DP]D{I|L}EMAH{I|L} 10 -1 + 29.039 0.0 0.0 2.5505 2.5505 60.704 0.0 0.0 0.0 -4.028449334251437 9.973024840566469 -4.028449334251437 0.2312379884713777 0 0.0 0.0 0.4247425010840047 0.0 V[DP]D{I|L}EMAH{I|L};[{I|L}P][WE]H{M(Oxidation (M))|F}V[DP];V[DP]D{[C(Carbamidomethyl (C))G]|[NC]}PGP{I|L}{I|L};V[DP]QQTMAH{I|L};[Y{I|L}]{[HG]|PP}E{I|L}D[RH];[{I|L}P][WE]H[NS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]{I|L}[TA]{[C(Carbamidomethyl (C))G]|[NC]}D[RH];[Y{I|L}][NG][KS]{M(Oxidation (M))|F}V[DP];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[NS]HWAH{I|L};[{I|L}P][WE]C(Carbamidomethyl (C))AA[RH] 2.5505;2.5302;2.3394;1.9118;1.6519;1.5668;1.5529;1.3024;1.2093;1.1477 -;-;-;-;-;-;-;-;-;- 815 + 1 1.449 90081.5 1.0 13204 5082 18287 HBL1_DMSO_200M_050219_2,18288 HBL1_DMSO_200M_050219_2,18288,TVELETDGYL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18289 98.018 800.0 121720.0 25 0 7323.0 -1 0 118 872.0900395969337 2613.248289391001 3 872.4224731326103 MULTI CID FTMS 0 0 0 18287 78091.390625 0.7416358848055391 1 -0.036346435546875 2 4 [KP]SS[KG]VG{I|L} 9 -1 21.507 0.0 0.0 0.823 0.0 0.0 0.0 1756.7279396197698 1756.7279396197698 -5.689228750093772 0.0 -5.689228750093772 0.0 0 0.0 0.0 0.8054621874040891 0.5994850021680094 [KP]SS[KG]VG{I|L} 0.823 - 2170 1 1.449 68777.9 0.5099999904632568 13205 5082 18287 HBL1_DMSO_200M_050219_2,18289 HBL1_DMSO_200M_050219_2,18289, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18290 98.024 357.0 380810.0 25 0 44757.0 + 2737 ATIGDLIHL 9 122 476.77715543206966 951.5397579309392 2 476.7770568728447 MULTI CID FTMS 0 0 0 18287 134221.328125 0.143998067948483 -6 0.1377716064453125 3 Unmodified _ATIGDLIHL_ ENSG00000165501|ENST00000298288|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF 28.486842064014134 0.1687311288560894 4 [TA]{I|L}G{NN|[MP]|[D{I|L}]|[EV]}{I|L}H{I|L} 9 0 + 48.707 0.0 0.0 5.1187 5.1187 73.458 0.0 0.0 0.0 26.695152255670536 2.900346113625183 2.900346113625183 2.900346113625183 0 0.3807196863200844 2.0 0.3807196863200844 0.0 + + [TA]{I|L}G{NN|[MP]|[D{I|L}]|[EV]}{I|L}H{I|L};[TA]{I|L}G{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}H;[VP][KG]{NN|[MP]|[D{I|L}]|[EV]}G{I|L}[PG];[PG]{I|L}VV[SG]G{I|L}[PG];[PG]{I|L}VV[NS]{I|L}[PG];[VP]AVV[SG]G{I|L}[PG];[VP]AVV[NS]{I|L}[PG];{[VA]|[{I|L}G]}PVV[SG]G{I|L}[PG] 5.1187;4.8139;1.4717;0.74741;0.55776;0.29408;0.10443;0.074162 +;-;-;-;-;-;-;- + 457 + 1 1.449 106943.3 1.0 13206 5082 18287 HBL1_DMSO_200M_050219_2,18290 HBL1_DMSO_200M_050219_2,18290,ATIGDLIHL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18291 98.034 571.0 223690.0 25 0 10054.0 + -1 NLISALEEA 9 114 959.4531603446007 1916.8917677560007 2 959.9537231326104 MULTI CID FTMS 0 0 0 18287 86959.15625 0.9542746395398264 -2 0.0393295288085937 4 nc|ENSG00000159131|P22102-2|GART;ENST00000424203.5_1_21:34876433-34900844:-|nuORF;ENSG00000159131|ENST00000381815|GART 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SA{I|L}{M(Oxidation (M))|F} 7 -1 63.977 0.0 0.0 3.3375 0.0 0.0 0.0 1155.4352575060157 1155.4352575060157 4.337709969491854 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.4731975075880328 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SA{I|L}{M(Oxidation (M))|F} 3.3375 - 4278 1 1.449 89151.5 1.0 13207 5082 18287 HBL1_DMSO_200M_050219_2,18291 HBL1_DMSO_200M_050219_2,18291, False False NLISALEEA 98.034379 959.95372313261 937608.25 18287.0 nc|ENSG00000159131|P22102-2|GART;;ENST00000424203.5_1_21:34876433-34900844:-|nuORF;;ENSG00000159131|ENST00000381815|GART 5.151544094085693 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18293 98.051 800.0 180960.0 25 0 3735.4 -1 0 143 1081.529071963174 3241.565386489722 3 1081.864550769329 MULTI CID FTMS 0 0 0 18292 211113.859375 0.2771622690202798 9 -0.3001327514648437 1 4 DPE{I|L}VM{[QV]|[N{I|L}]|[RA]|[KV]} 8 -1 38.831 0.0 0.0 1.1979 0.0 0.0 2312.1112528541767 0.0 2312.1112528541767 0.0 18.751837901751 0.0 0.0 0 1.218765315847925 0.0 0.4247425010840047 0.0 DPE{I|L}VM{[QV]|[N{I|L}]|[RA]|[KV]} 1.1979 - 2335 1 1.449 96335.7 0.8299999833106995 13208 5083 18292 HBL1_DMSO_200M_050219_2,18293 HBL1_DMSO_200M_050219_2,18293, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18294 98.059 444.0 235730.0 25 0 28082.0 + 16037 ITIPEIATSEL 11 133 593.8314494146126 1185.6483458960251 2 593.8320190310478 MULTI CID FTMS 0 0 0 18292 230074.703125 0.608152419925063 -10 0.2895965576171875 2 Unmodified _ITIPEIATSEL_ ENSG00000153107|ENST00000341068|ANAPC1 69.10491478415734 0.0349985100263309 4 {[QN]|[E{I|L}]|[KN]}PATSE 7 5 44.245 0.0 0.0 3.7317 0.0 0.0 0.0 455.2902886052627 455.2902886052627 9.63779449912984 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.305462187404089 0.0 {[QN]|[E{I|L}]|[KN]}PATSE 3.7317 - 3858 1 1.449 79527.0 1.0 13209 5083 18292 HBL1_DMSO_200M_050219_2,18294 HBL1_DMSO_200M_050219_2,18294,ITIPEIATSEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18295 98.067 453.0 307260.0 25 0 33740.0 + 10463 FTIFRTISV 9 131 542.3134585566298 1082.6123641800596 2 542.3138915896416 MULTI CID FTMS 0 0 0 18292 154531.71875 0.2992159054342647 -4 0.079742431640625 3 Unmodified _FTIFRTISV_ ENSG00000105447|ENST00000253237|GRWD1 63.22749603027936 0.0242951379232427 4 {M(Oxidation (M))|F}T{I|L}VV[YR]SV 9 4 + 55.874 0.0 0.0 5.161 5.161 72.577 0.0 0.0 0.0 28.08692967620098 14.09256854528806 14.09256854528806 2.2134030500787816 0 1.110924374808178 0.0 0.872363747448347 0.0 {M(Oxidation (M))|F}T{I|L}VV[YR]SV;{M(Oxidation (M))|F}TV{I|L}V[YR]SV;[{M(Oxidation (M))|F}T]{I|L}R{M(Oxidation (M))|F}T{I|L}SV;{M(Oxidation (M))|F}TVKKQ{M(Oxidation (M))|F}SV;{[ET]|[MV]}[RH]VV{I|L}MV;{[ET]|[MV]}[RH]V{I|L}VMV;{M(Oxidation (M))|F}TVKKNS{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}T]{I|L}R{I|L}T{M(Oxidation (M))|F}SV;[{M(Oxidation (M))|F}T]{I|L}R{I|L}S{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}T]{I|L}RS{I|L}{M(Oxidation (M))|F}TV 5.161;4.9566;3.8173;3.7465;3.0274;2.8229;2.3529;2.1996;1.7376;1.7376 -;-;-;-;-;-;-;-;-;- 990 + 1 1.449 112483.5 1.0 13210 5083 18292 HBL1_DMSO_200M_050219_2,18295 HBL1_DMSO_200M_050219_2,18295,FTIFRTISV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18296 98.075 477.0 306750.0 25 0 49853.0 + 24046 LWGAALLLL 9 135 485.311162604915 968.60777227663 2 485.3113586306572 MULTI CID FTMS 0 0 0 18292 119749.140625 0.9100267524137136 1 -0.0407943725585937 4 Unmodified _LWGAALLLL_ REV__ENSG00000163083|ENST00000295228|INHBB 36.46614268402704 0.0948557732959553 4 {[VA]|[{I|L}G]}WAA{I|L}{I|L}{I|L}{I|L} 9 -1 + 48.752 0.0 0.0 5.0333 5.0333 75.016 0.0 0.0 0.0 3.777366225837504 13.46787486224656 3.777366225837504 3.777366225837504 0 0.805462187404089 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}WAA{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}AAKPM{I|L}{I|L};{I|L}{I|L}NDR{I|L}{I|L}{I|L};{I|L}{I|L}A[WQ]{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}T[PS]R{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}KAA{I|L}{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}[DG]{I|L}R{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}VVKPM{I|L}{I|L};{[VA]|[{I|L}G]}[DG]R{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}AAKP{I|L}M{I|L} 5.0333;4.6433;4.2266;4.0253;3.8907;3.832;3.809;3.7399;3.68;3.5286 -;-;-;-;-;-;-;-;-;- 914 1 1.449 112889.2 1.0 13211 5083 18292 HBL1_DMSO_200M_050219_2,18296 HBL1_DMSO_200M_050219_2,18296,LWGAALLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18298 98.08 55.0 1249400.0 25 0 192160.0 + 20619 LLPPPIAPL 9 73 465.8047078018629 929.5948626705258 2 465.8050109744072 MULTI CID FTMS 0 0 0 18297 1019724.0625 0.8027596919363307 -1 0.0407943725585937 1 Unmodified _LLPPPIAPL_ ENSG00000136378|ENST00000388820|ADAMTS7 45.7499826716795 0.0496882803020414 4 {I|L}{I|L}PPP[{I|L}P]A{I|L} 9 2 + 50.97 0.0 0.0 5.483 5.483 87.174 0.0 0.0 0.0 23.80265290781964 8.873949984654253 8.873949984654253 20.00508444608478 0 1.066901560044258 2.0 0.0 0.0 {I|L}{I|L}PPP[{I|L}P]A{I|L};{I|L}{I|L}[YK][{I|L}P]A{I|L} 5.483;3.331 -;- 177 + 1 1.449 58817.5 1.0 13212 5084 18297 HBL1_DMSO_200M_050219_2,18298 HBL1_DMSO_200M_050219_2,18298,LLPPPIAPL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18299 98.092 648.0 282570.0 25 0 12860.0 -1 0 118 791.3727088192045 2371.096297057813 3 791.7081176638603 MULTI CID FTMS 0 0 0 18297 192106.796875 0.3953773194762362 22 -0.7219772338867188 2 4 {[HG]|PP}APPGDCNARGM 13 -1 47.319 0.0 0.0 1.9957 0.0 0.0 0.0 1104.5469998878611 1104.5469998878611 7.3625251064497235 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.066901560044258 0.0 {[HG]|PP}APPGDCNARGM 1.9957 - 68964 1 1.449 132080.3 1.0 13213 5084 18297 HBL1_DMSO_200M_050219_2,18299 HBL1_DMSO_200M_050219_2,18299, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18300 98.102 615.0 228020.0 25 0 50412.0 -1 0 121 494.2280514794429 493.2207750128429 1 494.2282897830009 MULTI CID FTMS 0 0 0 18297 169423.546875 0.7688198041149003 -6 0.136962890625 3 4 [VS]M{[SA]|[TG]} 5 -1 + 25.017 0.0 0.0 5.0721 5.0721 78.508 0.0 0.0 0.0 6.492435370573588 1.7951097132083405 1.7951097132083405 6.492435370573588 0 0.0 2.0 0.0 0.0 [VS]M{[SA]|[TG]};{[TV]|[{I|L}S]}M[SG];{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[SG];{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{[SA]|[TG]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[SG];{[VA]|[{I|L}G]}A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[MS]|[{M(Oxidation (M))|F}A]}V{[SA]|[TG]};D[KT]M 5.0721;3.7558;2.5244;1.9934;1.4072;1.1141;1.0065;0.87072 -;-;-;-;-;-;-;- 112 1 1.449 107823.3 1.0 13214 5084 18297 HBL1_DMSO_200M_050219_2,18300 HBL1_DMSO_200M_050219_2,18300, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18301 98.116 800.0 257140.0 25 0 18243.0 + 44558 YPETLGRLLI 10 131 587.8450825582048 1173.6756121832095 2 587.8450805544853 MULTI CID FTMS 0 0 0 18297 140005.328125 0.1718038735544002 -12 0.3617782592773437 4 Unmodified _YPETLGRLLI_ ENSG00000103184|ENST00000251170|SEC14L5;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 107.09958533191995 0.0045178149581522 4 YPET{I|L}GR{I|L}{I|L}{I|L} 10 0 + 99.668 0.0 0.0 8.492 8.492 90.294 0.0 0.0 0.0 37.94628966491621 14.146518864155126 14.146518864155126 7.429928190999391 0 2.247425010840047 1.6989700043360187 1.0941876774005248 0.2887254899964357 + + YPET{I|L}GR{I|L}{I|L}{I|L};YPE{I|L}TGR{I|L}{I|L}{I|L};YP{I|L}ETGR{I|L}{I|L}{I|L};YPE{I|L}[{I|L}A]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L};Y{I|L}PETGR{I|L}{I|L}{I|L};YP{I|L}E[{I|L}A]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L};[EP]T{I|L}{[NV]|[RG]}{I|L}{I|L}Y{I|L};[EP]T{I|L}{[NV]|[RG]}{I|L}{I|L}{I|L}Y;[EP]T{I|L}{[NV]|[RG]}{I|L}Y{I|L}{I|L};[EP]T{I|L}{[NV]|[RG]}Y{I|L}{I|L}{I|L} 8.492;7.8589;6.8217;5.9822;5.4757;4.945;4.5921;4.5242;4.3668;4.1103 +;-;-;-;-;-;-;-;-;- + 1515 + 1 1.449 157804.3 0.5600000023841858 13215 5084 18297 HBL1_DMSO_200M_050219_2,18301 HBL1_DMSO_200M_050219_2,18301,YPETLGRLLI True True YPETLGRLLI 98.11632 587.845080554485 28244370.0 18297.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000103184|ENST00000251170|SEC14L5;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 5.15748389561971 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18302 98.123 359.0 174070.0 25 0 43122.0 3017 AVLCHIKH 8 92 307.5092256494138 919.5058475484414 3 307.5091125369072 MULTI CID FTMS 0 0 0 18297 132881.015625 0.2463011037172637 -6 0.136962890625 5 Unmodified _AVLCHIKH_ ENSG00000081913|ENST00000262719|PHLPP1;nc|ENSG00000081913|O60346-2|PHLPP1 8.593279151180031 0.7721714526254883 4 AV{I|L}N 4 5 40.477 0.0 0.0 4.402 0.0 0.0 0.0 519.2392061822874 519.2392061822874 33.48721986001856 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 AV{I|L}N 4.402 - 28 + 1 1.449 55634.2 1.0 13216 5084 18297 HBL1_DMSO_200M_050219_2,18302 HBL1_DMSO_200M_050219_2,18302,AVLCHIKH False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18304 98.128 44.0 1270000.0 25 0 174110.0 + 4032 DALRSILTI 9 71 501.3032265673282 1000.5919002014564 2 501.3034545779228 MULTI CID FTMS 0 0 0 18303 1127562.125 0.010481517969993 16 -0.5362777709960938 1 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 40.23920728925047 0.0741434193262949 4 {[DA]|[EG]}{I|L}RS{I|L}{I|L}T{I|L} 9 0 + 60.997 0.0 0.0 6.0961 6.0961 57.079 0.0 0.0 0.0 0.0 16.478174818886373 0.0 0.0 0 1.1677353201839438 1.3979400086720375 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}RS{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}GRS{I|L}{I|L}T{I|L};[VP][PA][YK]{I|L}T{I|L} 6.0961;6.0961;2.707 +;-;- + 77 1 1.449 47513.9 1.0 13217 5085 18303 HBL1_DMSO_200M_050219_2,18304 HBL1_DMSO_200M_050219_2,18304,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18305 98.129 39.0 2183700.0 25 0 293300.0 + 20042 LIPDIDLKL 9 84 520.3231433229602 1038.6317337127202 2 520.3239623904228 MULTI CID FTMS 0 0 0 18303 1553064.75 0.8903374183670442 -6 0.1681442260742187 2 Unmodified _LIPDIDLKL_ ENSG00000173473|ENST00000254480|SMARCC1 26.268140514670165 0.1969607489560049 4 {I|L}{I|L}PD{I|L}D{I|L}K{I|L} 9 0 + 57.418 0.0 0.0 5.5282 5.5282 84.699 0.0 0.0 0.0 13.784853853988537 12.05136871872881 12.05136871872881 9.49092531119419 0 0.3807196863200844 2.0 0.0 0.0 + + {I|L}{I|L}PD{I|L}D{I|L}K{I|L};{I|L}{I|L}{I|L}[DP]D{I|L}K{I|L} 5.5282;4.6144 +;- + 156 + 1 1.449 70504.7 1.0 13218 5085 18303 HBL1_DMSO_200M_050219_2,18305 HBL1_DMSO_200M_050219_2,18305,LIPDIDLKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18306 98.13 51.0 872020.0 25 0 148470.0 + 15617 IQDSFPYLL 9 70 548.2898399185785 1094.565126903957 2 548.2902709841728 MULTI CID FTMS 0 0 0 18303 849663.3125 1.0 0 0.0 3 Unmodified _IQDSFPYLL_ ENSG00000173705|ENST00000309558|SUSD5 20.453626601364224 0.2830276176381075 4 [Y{I|L}]{I|L}{I|L} 4 5 26.911 0.0 0.0 2.4586 0.0 0.0 0.0 589.2255327479601 589.2255327479601 0.491727930838266 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [Y{I|L}]{I|L}{I|L} 2.4586 - 141 1 1.449 41041.5 1.0 13219 5085 18303 HBL1_DMSO_200M_050219_2,18306 HBL1_DMSO_200M_050219_2,18306,IQDSFPYLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18307 98.132 102.0 673340.0 25 0 118780.0 + 21459 LPHLPSLEI 9 96 509.8000880035055 1017.585623073811 2 509.8006164431572 MULTI CID FTMS 0 0 0 18303 517855.3125 0.2014557542969136 14 -0.49456787109375 4 Unmodified _LPHLPSLEI_ ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2 53.57557251787612 0.0325303259649373 4 [H{I|L}]P{I|L}[PS]{I|L}E{I|L} 9 2 + 63.751 0.0 0.0 6.2649 6.2649 82.846 0.0 0.0 0.0 12.213403050078782 16.478174818886373 12.213403050078782 6.020599913279625 0 0.7134679910804405 1.3010299956639813 0.7742275032520141 0.0 [H{I|L}]P{I|L}[PS]{I|L}E{I|L};[H{I|L}]PS[{I|L}P]{I|L}E{I|L};[H{I|L}]P{I|L}[PS]E{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[PS]{I|L}E{I|L};[H{I|L}]PS[{I|L}P]E{I|L}{I|L};[H{I|L}]P{I|L}{[ES]|[DT]|[{I|L}C]}P{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}S[{I|L}P]{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}[PS]E{I|L}{I|L};[{I|L}P]H{I|L}[PS]{I|L}E{I|L};[H{I|L}]PS{[QN]|[E{I|L}]|[KN]}P{I|L}{I|L} 6.2649;5.6733;5.4647;5.0647;4.873;4.7515;4.473;4.2645;4.2588;4.1598 -;-;-;-;-;-;-;-;+;- + 306 1 1.449 56405.2 1.0 13220 5085 18303 HBL1_DMSO_200M_050219_2,18307 HBL1_DMSO_200M_050219_2,18307,LPHLPSLEI True True LPHLPSLEI 98.132287 509.800616443157 90841400.0 18303.0 ENSG00000088930|ENST00000377191|XRN2;;nc|ENSG00000088930|Q9H0D6-2|XRN2 3.494969209035238 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18308 98.135 134.0 490810.0 25 0 61154.0 + + -1 IVVGMTNGILSV 12 91 601.8443018963598 1201.6740508595194 2 601.8445922732353 MULTI CID FTMS 0 0 0 18303 389948.375 1.0 0 0.0 5 Carbamidomethyl (C) _SILQLGC(Carbamidomethyl (C))LISV_ nc|ENSG00000164338|Q8TED0-3|UTP15;ENSG00000164338|ENST00000296792|UTP15;ENST00000512550.1_1_5:72868339-72873863:+|nuORF;nc|ENSG00000164338|Q8TED0-2|UTP15 36.506200033944 0.2662161991516171 4 {[QN]|[E{I|L}]|[KN]}[WM]{I|L}V{I|L}{I|L}SV 10 -1 {[QN]|[E{I|L}]|[KN]}[WM]{I|L}V{I|L} + + 30.93 24.481 2.7678 2.5739 2.5739 45.202 0.0 0.0 0.0 0.0 6.449018044899617 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 {[QN]|[E{I|L}]|[KN]}[WM]{I|L}V{I|L}{I|L}SV 2.5739 - 95 + 1 1.449 51969.1 1.0 13221 5085 18303 HBL1_DMSO_200M_050219_2,18308 HBL1_DMSO_200M_050219_2,18308,SILQLGCLISV False False IVVGMTNGILSV 98.13502 601.844592273235 3236264.75 18303.0 nc|ENSG00000164338|Q8TED0-3|UTP15;;ENSG00000164338|ENST00000296792|UTP15;;ENST00000512550.1_1_5:72868339-72873863:+|nuORF;;nc|ENSG00000164338|Q8TED0-2|UTP15 5.369524161020915 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18309 98.149 800.0 181630.0 25 0 25968.0 + 10747 FYIGEHLLPY 10 121 626.3237405002732 1250.6329280673465 2 626.3238403201103 MULTI CID FTMS 0 0 0 18303 135762.28125 0.8666694595476131 -2 0.0884017944335937 6 Unmodified _FYIGEHLLPY_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000470302.5_1_2:230656574-230657731:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 54.773552608820026 0.052133998764723 4 {NN|[MP]|[D{I|L}]|[EV]}[HA]{I|L}Y{M(Oxidation (M))|F}{I|L}PY 10 6 + 50.084 0.0 0.0 4.0047 4.0047 68.565 0.0 0.0 0.0 2.498774732165998 8.207027803924873 2.498774732165998 2.498774732165998 0 1.1237125054200234 1.5228787452803376 0.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}[HA]{I|L}Y{M(Oxidation (M))|F}{I|L}PY;[H{I|L}]EG{I|L}Y{M(Oxidation (M))|F}{I|L}PY;{NN|[MP]|[D{I|L}]|[EV]}[HA]{I|L}{M(Oxidation (M))|F}Y{I|L}PY;{[YC]|[HE]}G{I|L}{I|L}Y{M(Oxidation (M))|F}{I|L}PY;{NN|[MP]|[D{I|L}]|[EV]}[HA]{I|L}{I|L}Y{M(Oxidation (M))|F}PY;[H{I|L}]EG{I|L}{M(Oxidation (M))|F}Y{I|L}PY;[H{I|L}]EG{I|L}{I|L}Y{M(Oxidation (M))|F}PY;{[YC]|[HE]}G{I|L}{I|L}{M(Oxidation (M))|F}Y{I|L}PY;{[YC]|[HE]}{I|L}G{I|L}Y{M(Oxidation (M))|F}{I|L}PY;{[DA]|[EG]}H{I|L}{I|L}Y{M(Oxidation (M))|F}{I|L}PY 4.0047;3.8049;3.764;3.6676;3.6651;3.5642;3.4653;3.4269;3.4234;3.3734 -;-;-;-;-;-;-;-;-;- 1223 1 1.449 113766.1 0.5600000023841858 13222 5085 18303 HBL1_DMSO_200M_050219_2,18309 HBL1_DMSO_200M_050219_2,18309,FYIGEHLLPY True True FYIGEHLLPY 98.148857 626.32384032011 1305270.5 18303.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12;;ENST00000470302.5_1_2:230656574-230657731:-|nuORF 5.571906884511312 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18311 98.155 134.0 616310.0 25 0 63713.0 + 21284 LPEDLYHLI 9 90 556.8030547361668 1111.5915565391335 2 556.8032714724541 MULTI CID FTMS 0 0 0 18310 550811.0 1.0 0 0.0 1 Unmodified _LPEDLYHLI_ ENSG00000110700|ENST00000525634|RPS13;ENST00000458227.1_1_2:25191966-25192092:-|nuORF;ENST00000526895.5_1_11:17095982-17099246:-|nuORF;ENST00000531908.5_1_11:17095982-17097186:-|nuORF 85.35673624503755 0.0162188719545379 4 {I|L}PED{I|L}YH{I|L}{I|L} 9 0 + 89.498 0.0 0.0 8.0513 8.0513 95.259 0.0 0.0 0.0 56.33716304900595 11.082268588648247 11.082268588648247 17.844406447039063 0 1.924742501084005 1.5228787452803376 0.75 0.0 + + {I|L}PED{I|L}YH{I|L}{I|L};[EP]D{I|L}YH{I|L}{I|L}{I|L};[EP]D{I|L}Y{I|L}H{I|L}{I|L};{[WN]|[YH]}{I|L}DEP{I|L}{I|L}{I|L};[H{I|L}]YDEP{I|L}{I|L}{I|L};{[WN]|[YH]}{I|L}D{I|L}EP{I|L}{I|L};{[WN]|[YH]}{I|L}DE{I|L}P{I|L}{I|L};[H{I|L}]YD{I|L}EP{I|L}{I|L};[EP]{I|L}S{[QC]|[C(Carbamidomethyl (C))A]}P{I|L}{I|L}{I|L};[H{I|L}]YDE{I|L}P{I|L}{I|L} 8.0513;6.446;6.267;4.4408;4.2412;4.0576;3.8992;3.858;3.8567;3.6996 +;-;-;-;-;-;-;-;-;- + 708 + 1 1.455 70843.9 1.0 13223 5086 18310 HBL1_DMSO_200M_050219_2,18311 HBL1_DMSO_200M_050219_2,18311,LPEDLYHLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18312 98.162 342.0 482670.0 25 0 132620.0 + 30687 RFPPTPPLF 9 104 536.30378978593 0 536.3038818240166 PEAK CID FTMS 0 0 0 18310 103535.609375 0.4723538498496957 20 -0.6482925415039062 2 Unmodified _RFPPTPPLF_ chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A;ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A 20.453626601364224 0.1969592619112565 4 P 1 8 10.485 0.0 0.0 0.97932 0.0 0.0 598.3239013932042 372.19311358469935 970.5170149779036 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + P 0.97932 + + 63 + 1 1.455 130096.7 1.0 13224 5086 18310 HBL1_DMSO_200M_050219_2,18312 HBL1_DMSO_200M_050219_2,18312,RFPPTPPLF False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18313 98.167 276.0 161670.0 25 0 34473.0 -1 0 71 472.24587824268207 471.2386017760821 1 472.2460204958916 MULTI CID FTMS 0 0 0 18310 231125.453125 0.8385179779330527 1 -0.045562744140625 3 4 V 1 -1 12.474 0.0 0.0 2.6471 0.0 0.0 354.1590709917055 0.0 354.1590709917055 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.6471 - 9 + 1 1.455 40931.1 1.0 13225 5086 18310 HBL1_DMSO_200M_050219_2,18313 HBL1_DMSO_200M_050219_2,18313, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18314 98.181 800.0 160240.0 25 0 12566.0 + 24423 KMGLIFEV 8 128 468.7644714949508 935.5143900567016 2 468.7646667361259 MULTI CID FTMS 0 0 0 18310 122455.6953125 1.0 0 0.0 4 Unmodified _MGIKFLEV_ ENSG00000086598|ENST00000262225|TMED2 28.486842064014134 0.4448922141344407 4 {[VA]|[{I|L}G]}MK{I|L}{M(Oxidation (M))|F}EV 8 4 + 44.229 0.0 0.0 4.7278 4.7278 70.957 0.0 0.0 0.0 4.794869019082952 33.11980635110976 4.794869019082952 2.272437815030621 0 1.0387254899964358 0.9208187539523752 0.0 0.0 {[VA]|[{I|L}G]}MK{I|L}{M(Oxidation (M))|F}EV;{[VA]|[{I|L}G]}{I|L}MK{M(Oxidation (M))|F}EV;{[VA]|[{I|L}G]}M{I|L}K{M(Oxidation (M))|F}EV;{I|L}{I|L}GMK{M(Oxidation (M))|F}EV;{[VA]|[{I|L}G]}MK{M(Oxidation (M))|F}{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PG]K{M(Oxidation (M))|F}EV;HH{M(Oxidation (M))|F}{I|L}[RN]{I|L};HH{M(Oxidation (M))|F}[RN]{I|L}{I|L} 4.7278;4.4849;4.3513;4.1814;3.672;2.44;0.95063;0.20348 -;-;-;-;-;-;-;- 260 1 1.455 103862.2 0.4600000083446502 13226 5086 18310 HBL1_DMSO_200M_050219_2,18314 HBL1_DMSO_200M_050219_2,18314,MGIKFLEV False False KMGLIFEV 98.18057 468.764666736126 907631.9375 18310.0 ENSG00000086598|ENST00000262225|TMED2 0.9765267968177797 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18315 98.194 800.0 116440.0 25 0 11896.0 + 33193 SFGFLNFESI 10 144 580.7851830014108 1159.5558130696215 2 580.7835571169853 MULTI CID FTMS 0 0 0 18310 83950.765625 0.866994987246844 -3 0.1144790649414062 5 Unmodified _SFGFLNFESI_ REV__ENSG00000176231|ENST00000322107|OR10H4 18.1463463914782 0.5430639438673815 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 6 -1 29.385 0.0 0.0 2.5342 0.0 0.0 0.0 484.24011417729656 484.24011417729656 -0.7918124604762511 0.0 -0.7918124604762511 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 2.5342 - 541 1 1.455 72999.6 0.4300000071525574 13227 5086 18310 HBL1_DMSO_200M_050219_2,18315 HBL1_DMSO_200M_050219_2,18315,SFGFLNFESI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18317 98.2 155.0 315880.0 25 0 61675.0 23612 LTPQYLALL 9 77 516.3104467886293 1030.6063406440585 2 516.3111450076103 MULTI CID FTMS 0 0 0 18316 235847.59375 0.9436563091436204 2 -0.0703964233398437 1 Unmodified _LTPQYLALL_ ENSG00000048740|ENST00000633077|CELF2;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319-3|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319|CELF2 29.081581746732265 0.1611639662936252 4 [{I|L}T]PQY{I|L} 6 3 40.239 0.0 0.0 3.9044 0.0 0.0 0.0 312.1920120013165 312.1920120013165 23.03731921349335 0.0 0.0 0.0 0 0.0 1.154901959985743 0.805462187404089 0.0 + [{I|L}T]PQY{I|L} 3.9044 + + 324 1 1.455 45733.6 1.0 13228 5087 18316 HBL1_DMSO_200M_050219_2,18317 HBL1_DMSO_200M_050219_2,18317,LTPQYLALL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18318 98.203 128.0 565770.0 25 0 64778.0 + 20061 LISEGDMHNVS 11 104 601.2772920853854 1200.5400312375707 2 601.2778198122978 MULTI CID FTMS 0 0 0 18316 277428.40625 0.0888350388725573 17 -0.5443649291992188 2 Unmodified _LISEGDMHNVS_ REV__ENST00000551367.5_1_21:37741970-37758388:+|nuORF 18.1463463914782 0.6576820063886638 4 {[TV]|[{I|L}S]}{I|L}E 4 -1 32.142 0.0 0.0 2.6773 0.0 0.0 0.0 755.2744116909488 755.2744116909488 13.145730491297169 0.0 0.0 0.0 0 0.0 2.0 0.7951140161145328 0.0 {[TV]|[{I|L}S]}{I|L}E 2.6773 - 297 1 1.455 55912.0 1.0 13229 5087 18316 HBL1_DMSO_200M_050219_2,18318 HBL1_DMSO_200M_050219_2,18318,LISEGDMHNVS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18319 98.216 800.0 146810.0 25 0 17080.0 + 36554 TALAQIMTI 9 154 481.27270844612616 960.5308639590525 2 481.2726318240166 MULTI CID FTMS 0 0 0 18316 100639.25 0.0539768645678919 -9 0.2562103271484375 3 Unmodified _TALAQIMTI_ ENSG00000097046|ENST00000234626|CDC7 43.85829265575387 0.0542763391141878 4 [TA]{I|L}AQ{I|L} 6 3 28.338 0.0 0.0 2.9502 0.0 0.0 0.0 360.1573534266918 360.1573534266918 -10.084490163364912 0.0 -10.084490163364912 0.0 0 0.0 1.6989700043360187 0.5484550065040282 0.0 + [TA]{I|L}AQ{I|L} 2.9502 + + 712 1 1.455 89778.5 0.8899999856948853 13230 5087 18316 HBL1_DMSO_200M_050219_2,18319 HBL1_DMSO_200M_050219_2,18319,TALAQIMTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18320 98.23 800.0 143680.0 25 0 6582.7 + 3255 AYGNVFSAF 9 116 975.4568811603866 974.4496046937866 1 975.4573852419852 MULTI CID FTMS 0 0 0 18316 85177.7421875 0.7727275175666104 2 -0.0703964233398437 4 Unmodified _AYGNVFSAF_ ENSG00000134987|ENST00000513710|WDR36;ENST00000505303.5_1_5:110428043-110447004:+|nuORF;nc|ENSG00000134987|Q8NI36|WDR36 71.13359017698441 0.0206607516130725 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NG]V{M(Oxidation (M))|F}SA{M(Oxidation (M))|F} 9 0 + 69.364 0.0 0.0 7.1182 7.1182 77.743 0.0 0.0 0.0 13.29058719264225 14.973024840566469 13.29058719264225 0.8880864569399307 0 0.555462187404089 1.6989700043360187 0.3252574989159953 1.8494850021680087 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NG]V{M(Oxidation (M))|F}SA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AQA{M(Oxidation (M))|F}SA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[NG]VAYA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AQAAYA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RN]{M(Oxidation (M))|F}SA{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RN]AYA{M(Oxidation (M))|F};[NG]YAV{M(Oxidation (M))|F}SA{M(Oxidation (M))|F};{[NV]|[RG]}GAY{M(Oxidation (M))|F}SA{M(Oxidation (M))|F};{[NV]|[RG]}QY{M(Oxidation (M))|F}SA{M(Oxidation (M))|F};[NG]YAVAYA{M(Oxidation (M))|F} 7.1182;7.0271;6.8906;6.7994;6.4534;6.2258;5.7543;5.5559;5.509;5.1929 +;-;-;-;-;-;-;-;-;- + 4278 1 1.455 76324.6 0.449999988079071 13231 5087 18316 HBL1_DMSO_200M_050219_2,18320 HBL1_DMSO_200M_050219_2,18320,AYGNVFSAF True True AYGNVFSAF 98.230355 975.457385241985 990855.0 18316.0 nc|ENSG00000134987|Q8NI36|WDR36;;ENSG00000134987|ENST00000513710|WDR36;;ENST00000505303.5_1_5:110428043-110447004:+|nuORF 5.880053520202637 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18322 98.237 215.0 507810.0 25 0 88775.0 + 20875 LMLSTGSLV 9 88 460.7610697284564 919.5075865237128 2 460.7622558474541 MULTI CID FTMS 0 0 0 18321 269305.28125 0.3483683489695006 -2 0.0814895629882812 1 Unmodified _LMLSTGSLV_ REV__ENSG00000162510|ENST00000373765|MATN1 18.13498045792455 0.3457906370836843 4 V{I|L}DM 4 -1 23.972 0.0 0.0 2.6071 0.0 0.0 376.2007150410941 82.06690393619374 458.2676189772878 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 V{I|L}DM 2.6071 - 115 + 1 1.455 90068.4 1.0 13232 5088 18321 HBL1_DMSO_200M_050219_2,18322 HBL1_DMSO_200M_050219_2,18322,LMLSTGSLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18323 98.24 146.0 501710.0 25 0 47285.0 + 35130 SQYPFPVTL 9 108 526.276598494415 1050.53864405563 2 526.2769042849541 MULTI CID FTMS 0 0 0 18321 172635.375 0.206967336717493 -8 0.2716445922851562 2 Unmodified _SQYPFPVTL_ ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-2|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L 36.506200033944 0.094635877243972 4 {I|L}{I|L}R[VP]T{I|L} 7 5 40.404 0.0 0.0 3.8461 0.0 0.0 240.0049659323861 0.0 240.0049659323861 0.0 14.131228690198164 0.0 0.0 0 0.8807196863200843 0.0 0.5891368308784531 0.0 {I|L}{I|L}R[VP]T{I|L} 3.8461 - 379 + 1 1.455 64748.8 1.0 13233 5088 18321 HBL1_DMSO_200M_050219_2,18323 HBL1_DMSO_200M_050219_2,18323,SQYPFPVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18324 98.251 636.0 232700.0 25 0 27431.0 + -1 FPLDLDVRV 9 144 537.7451882051134 1073.4758234770268 2 537.7454101443291 MULTI CID FTMS 0 0 0 18321 101246.0546875 0.5686268031459275 -2 0.0814895629882812 3 Oxidation (M) _LEFM(Oxidation (M))SFDGL_ ENST00000571541.5_1_17:7293706-7296729:-|nuORF;ENSG00000187838|ENST00000619711|PLSCR3 15.847184025352805 0.4077185912009129 4 {I|L}ENY{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E]{I|L} 8 -1 + 43.202 0.0 0.0 4.0245 4.0245 81.923 0.0 0.0 0.0 24.22274038527276 5.031855506296544 5.031855506296544 25.3766876200704 0 0.8812033112643842 0.9208187539523752 0.4247425010840047 0.0 {I|L}ENY{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E]{I|L};[{I|L}P]D[NP]PV[YC(Carbamidomethyl (C))];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KT]C(Carbamidomethyl (C))V[YC(Carbamidomethyl (C))];[{M(Oxidation (M))|F}V]{[QV]|[N{I|L}]|[RA]|[KV]}C(Carbamidomethyl (C))V[YC(Carbamidomethyl (C))];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[NV]|[RG]}C(Carbamidomethyl (C))V[YC(Carbamidomethyl (C))];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Y{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KT][CG]V[YC(Carbamidomethyl (C))];{[QD]|[EN]|[WG]|[KD]|[RS]}D{[QN]|[E{I|L}]|[KN]}[WR]{I|L};[YK][MN]PV[YC(Carbamidomethyl (C))];{NN|[MP]|[D{I|L}]|[EV]}P[NP]PV[YC(Carbamidomethyl (C))] 4.0245;1.6605;1.03;0.59224;0.45595;0.26204;0.16714;0.15465;0.11641;0.016938 -;-;-;-;-;-;-;-;-;- 646 + 1 1.455 116445.0 1.0 13234 5088 18321 HBL1_DMSO_200M_050219_2,18324 HBL1_DMSO_200M_050219_2,18324,LEFMSFDGL False False FPLDLDVRV 98.25099 537.745410144329 1372786.25 18321.0 ENST00000571541.5_1_17:7293706-7296729:-|nuORF;;ENSG00000187838|ENST00000619711|PLSCR3 1.4388038317362468 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18325 98.265 800.0 122830.0 25 0 9097.3 -1 0 111 799.6371628053679 3194.5195453550714 4 800.1374389529228 MULTI CID FTMS 0 0 0 18321 69821.8359375 0.1816601854198411 -8 0.2716445922851562 4 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 60.345 0.0 0.0 1.889 0.0 0.0 0.0 2153.9009725157102 2153.9009725157102 44.88249168527288 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.2887254899964357 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.889 - 1327 1 1.455 73213.5 0.4000000059604645 13235 5088 18321 HBL1_DMSO_200M_050219_2,18325 HBL1_DMSO_200M_050219_2,18325, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18327 98.27 82.0 627960.0 25 0 103530.0 + 7782 ELGSTEDIYL 10 74 570.2771501609695 1138.539747388739 2 570.2774536013603 MULTI CID FTMS 0 0 0 18326 494087.3125 0.939852239583352 -1 0.0344696044921875 1 Unmodified _ELGSTEDIYL_ ENSG00000146122|ENST00000274867|DAAM2;nc|ENSG00000146122|Q86T65-4|DAAM2 20.453626601364224 0.5043500229302764 4 V{I|L}AE{I|L}Y{I|L} 7 5 40.564 0.0 0.0 3.5628 0.0 0.0 319.0666371076188 0.0 319.0666371076188 0.0 15.952526344083465 0.0 0.0 0 0.7742275032520141 0.0 0.8252574989159953 0.0 V{I|L}AE{I|L}Y{I|L} 3.5628 - 166 1 1.455 45849.7 1.0 13236 5089 18326 HBL1_DMSO_200M_050219_2,18327 HBL1_DMSO_200M_050219_2,18327,ELGSTEDIYL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18328 98.274 213.0 356590.0 25 0 48824.0 + 9866 FPFGYVSNI 9 106 522.2631012076528 1042.5116494821054 2 522.2637817263603 MULTI CID FTMS 0 0 0 18326 315662.5 0.8775234053732107 19 -0.6570053100585938 2 Unmodified _FPFGYVSNI_ ENSG00000159259|ENST00000314103|CHAF1B;ENST00000481458.1_1_21:37771819-37785123:+|nuORF 34.18733598223924 0.1073653526364521 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}V 6 5 36.375 0.0 0.0 3.4892 0.0 0.0 0.0 329.1464938571124 329.1464938571124 19.436974992327123 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}V 3.4892 - 483 1 1.455 65112.9 1.0 13237 5089 18326 HBL1_DMSO_200M_050219_2,18328 HBL1_DMSO_200M_050219_2,18328,FPFGYVSNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18329 98.285 628.0 260270.0 25 0 55913.0 + 35902 SVMSILPKI 9 118 494.2991587043379 986.5837644754758 2 494.2995788455009 MULTI CID FTMS 0 0 0 18326 110351.015625 0.9484375748052368 2 -0.0587005615234375 3 Unmodified _SVMSILPKI_ ENSG00000111897|ENST00000339697|SERINC1 45.69961567697781 0.0497987121815769 4 [VS]MS{I|L}{I|L}PK{I|L} 9 0 + 71.137 0.0 0.0 7.2104 7.2104 85.978 0.0 0.0 0.0 55.95459138175157 6.716039268698324 6.716039268698324 5.897554856604174 0 1.0501648626366045 2.0 0.0 0.0 + + [VS]MS{I|L}{I|L}PK{I|L};[VS]{M(Oxidation (M))|F}A{I|L}{I|L}PK{I|L};[VS]MS{I|L}{I|L}{I|L}[KP];[VS]{M(Oxidation (M))|F}A{I|L}{I|L}{I|L}[KP];[VS]MS{I|L}[KP]{I|L}{I|L};[VS]{M(Oxidation (M))|F}A{I|L}[KP]{I|L}{I|L};[YK][EP]{I|L}PK{I|L};[YK][EP]{I|L}{I|L}[KP] 7.2104;6.6126;5.9763;5.3786;4.9432;4.3454;1.3831;0.14903 +;-;-;-;-;-;-;- + 259 + 1 1.455 126655.1 1.0 13238 5089 18326 HBL1_DMSO_200M_050219_2,18329 HBL1_DMSO_200M_050219_2,18329,SVMSILPKI True True SVMSILPKI 98.284609 494.299578845501 2704181.0 18326.0 ENSG00000111897|ENST00000339697|SERINC1 5.101566155751546 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18330 98.298 800.0 106700.0 25 0 8937.7 + 3148 AVRGMFLL 8 113 453.76517746814176 905.5158020030836 2 453.7659484744072 MULTI CID FTMS 0 0 0 18326 90052.921875 1.0 0 0.0 4 Unmodified _AVRGMFLL_ REV__ENSG00000099937|ENST00000215727|SERPIND1 11.114462752807354 0.7467182956244686 4 {I|L}{I|L}{[ES]|[DT]|[{I|L}C]}E{I|L}{I|L} 7 -1 26.33 0.0 0.0 2.9078 0.0 0.0 90.02791580634569 0.0 90.02791580634569 0.0 16.24175720442146 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{[ES]|[DT]|[{I|L}C]}E{I|L}{I|L} 2.9078 - 202 + 1 1.455 69605.2 0.800000011920929 13239 5089 18326 HBL1_DMSO_200M_050219_2,18330 HBL1_DMSO_200M_050219_2,18330,AVRGMFLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18332 98.303 57.0 1224600.0 25 0 186450.0 + 2738 ATIGDLIHL 9 86 476.77715543206966 951.5397579309392 2 476.7771789431572 MULTI CID FTMS 0 0 0 18331 717718.0625 0.7699969578268437 2 -0.0360870361328125 1 Unmodified _ATIGDLIHL_ ENSG00000165501|ENST00000298288|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF 44.40701690623563 0.0526327925666318 4 [TA]{I|L}GD{I|L}{I|L}[H{I|L}] 9 0 + 60.596 0.0 0.0 6.3682 6.3682 91.921 0.0 0.0 0.0 36.37009080640347 7.147642715192504 7.147642715192504 37.65916793966632 0 0.4247425010840047 2.0 0.3494850021680094 0.0 + + [TA]{I|L}GD{I|L}{I|L}[H{I|L}];[VP][KG]{I|L}DG{I|L}[PG];[KA]EE{I|L}{I|L}[H{I|L}] 6.3682;2.4105;0.93259 +;-;- + 214 + 1 1.455 58212.1 1.0 13240 5090 18331 HBL1_DMSO_200M_050219_2,18332 HBL1_DMSO_200M_050219_2,18332,ATIGDLIHL True True ATIGDLIHL 98.303217 476.777178943157 13722750.0 18331.0 ENST00000540712.1_1_14:50068361-50081211:+|nuORF;;ENSG00000165501|ENST00000298288|LRR1 3.589823365211487 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18333 98.306 89.0 899140.0 25 0 146190.0 -1 0 80 530.1340032659888 529.1267267993887 1 530.1342651247978 MULTI CID FTMS 0 0 0 18331 508962.78125 0.3158707285192779 5 -0.1265716552734375 2 4 {[TV]|[{I|L}S]}{I|L}Q 4 -1 24.27 0.0 0.0 4.5868 0.0 0.0 0.0 84.8450550066731 84.8450550066731 9.030899869919438 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}Q 4.5868 - 58 1 1.455 65277.0 1.0 13241 5090 18331 HBL1_DMSO_200M_050219_2,18333 HBL1_DMSO_200M_050219_2,18333, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18334 98.307 87.0 484010.0 25 0 52879.0 20326 LLFDDSFL 8 72 485.250505919945 968.48645890669 2 485.2505065798759 MULTI CID FTMS 0 0 0 18331 335135.46875 1.0 0 0.0 3 Unmodified _LLFDDSFL_ ENSG00000128203|ENST00000215906|ASPHD2 9.347437153973935 0.7675937258251505 4 {I|L}S 2 6 24.776 0.0 0.0 2.5582 0.0 0.0 0.0 765.3465363835273 765.3465363835273 6.549471895720984 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}S 2.5582 - 29 + 1 1.455 37588.1 1.0 13242 5090 18331 HBL1_DMSO_200M_050219_2,18334 HBL1_DMSO_200M_050219_2,18334,LLFDDSFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18335 98.311 212.0 156560.0 25 0 16777.0 + 19103 LDSQGPHS 8 64 420.6960630952847 839.3775732573695 2 420.6959106326103 MULTI CID FTMS 0 0 0 18331 262611.0 1.0 0 0.0 4 Unmodified _LDSQGPHS_ REV__ENSG00000198920|ENST00000361413|KIAA0753 4.3292370932331545 0.7980541185046766 4 D{I|L} 2 -1 37.959 0.0 0.0 4.5223 0.0 0.0 0.0 608.2437758560228 608.2437758560228 16.989700043360187 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 D{I|L} 4.5223 - 26 + 1 1.455 31592.5 1.0 13243 5090 18331 HBL1_DMSO_200M_050219_2,18335 HBL1_DMSO_200M_050219_2,18335,LDSQGPHS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18336 98.317 327.0 250680.0 25 0 41691.0 + -1 LSCFSYAEL 9 109 545.2501627341782 1088.4857725351562 2 545.2499267458916 MULTI CID FTMS 0 0 0 18331 147534.65625 1.0 0 0.0 5 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))FSYAEL_ REV__ENST00000265062.7_1_3:128532272-128532644:+|nuORF 26.88365393820708 0.1891292719743517 4 {I|L}{M(Oxidation (M))|F} 2 -1 37.836 0.0 0.0 3.476 0.0 0.0 0.0 825.3253454286746 825.3253454286746 8.890960351139995 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 0.0 0.0 {I|L}{M(Oxidation (M))|F} 3.476 - 177 + 1 1.455 69588.3 1.0 13244 5090 18331 HBL1_DMSO_200M_050219_2,18336 HBL1_DMSO_200M_050219_2,18336,LSCFSYAEL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18337 98.323 337.0 146890.0 25 0 16430.0 -1 IPMVIFEL 8 70 489.2708826895864 0 489.2708923220634 PEAK CID FTMS 0 0 0 18331 124438.5 1.0 0 0.0 6 Oxidation (M) _IPM(Oxidation (M))VIFEL_ ENSG00000155085|ENST00000424296|AK9 15.768221252438446 0.4767174489346095 4 {I|L}T{M(Oxidation (M))|F} 3 -1 7.1278 0.0 0.0 0.72991 0.0 0.0 405.2255356384504 207.1141756647094 612.3397113031598 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 {I|L}T{M(Oxidation (M))|F} 0.72991 - 14 + 1 1.455 44052.5 1.0 13245 5090 18331 HBL1_DMSO_200M_050219_2,18337 HBL1_DMSO_200M_050219_2,18337,IPMVIFEL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18339 98.331 165.0 479730.0 25 0 49044.0 + 10464 FTIFRTISV 9 94 542.3134585566298 1082.6123641800596 2 542.3137695193291 MULTI CID FTMS 0 0 0 18338 350042.03125 0.6777776379356937 4 -0.1014785766601562 1 Unmodified _FTIFRTISV_ ENSG00000105447|ENST00000253237|GRWD1 51.41523569358685 0.0372669606867193 4 {M(Oxidation (M))|F}{I|L}TE 4 6 38.8 0.0 0.0 3.5839 0.0 0.0 574.3452625959 0.0 574.3452625959 0.0 18.68054082491639 0.0 0.0 0 0.3807196863200844 0.0 0.3054621874040891 0.0 {M(Oxidation (M))|F}{I|L}TE 3.5839 - 230 1 1.462 65270.9 1.0 13246 5091 18338 HBL1_DMSO_200M_050219_2,18339 HBL1_DMSO_200M_050219_2,18339,FTIFRTISV True True FTIFRTISV 98.330644 542.313769519329 8188531.5 18338.0 ENSG00000105447|ENST00000253237|GRWD1 7.151270707448323 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18340 98.335 202.0 302100.0 25 0 42657.0 + 16038 ITIPEIATSEL 11 90 593.8314494146126 1185.6483458960251 2 593.8324462771416 MULTI CID FTMS 0 0 0 18338 302820.34375 0.8004396935114024 -2 0.0587005615234375 2 Unmodified _ITIPEIATSEL_ ENSG00000153107|ENST00000341068|ANAPC1 88.95385435242217 0.0009976987138062 4 {[QN]|[E{I|L}]|[KN]}PAT{I|L} 6 6 44.27 0.0 0.0 3.7338 0.0 0.0 0.0 558.2767998357314 558.2767998357314 20.03440122187329 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.0 0.0 {[QN]|[E{I|L}]|[KN]}PAT{I|L} 3.7338 - 1151 1 1.462 48052.4 1.0 13247 5091 18338 HBL1_DMSO_200M_050219_2,18340 HBL1_DMSO_200M_050219_2,18340,ITIPEIATSEL True True ITIPEIATSEL 98.33451 593.832446277142 18993919.5 18338.0 ENSG00000153107|ENST00000341068|ANAPC1 5.048906326293945 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18342 98.339 53.0 1374500.0 25 0 180000.0 + 20620 LLPPPIAPL 9 91 465.8047078018629 929.5948626705258 2 465.8050414919853 MULTI CID FTMS 0 0 0 18341 747925.1875 0.5887908456695091 7 -0.2828369140625 1 Unmodified _LLPPPIAPL_ ENSG00000136378|ENST00000388820|ADAMTS7 45.7499826716795 0.0496882803020414 4 {I|L}{I|L}PP{I|L}PPA{I|L} 9 3 + 47.872 0.0 0.0 5.1498 5.1498 87.246 0.0 0.0 0.0 23.25821083970215 6.822581265925436 6.822581265925436 47.87247350163359 0 0.6505149978319906 1.6989700043360187 0.0 0.0 {I|L}{I|L}PP{I|L}PPA{I|L} 5.1498 - 583 + 1 1.462 64215.1 1.0 13248 5092 18341 HBL1_DMSO_200M_050219_2,18342 HBL1_DMSO_200M_050219_2,18342,LLPPPIAPL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18343 98.349 547.0 201140.0 25 0 15964.0 + 11700 GLGGRFLFASV 11 134 562.3160777480537 1122.6176025629072 2 562.3151122927666 MULTI CID FTMS 0 0 0 18341 164046.03125 0.6190205310219971 -4 0.1041641235351562 2 Unmodified _GLGGRFLFASV_ ENSG00000134243|ENST00000256637|SORT1;nc|ENSG00000134243|Q99523-2|SORT1 74.19965305603844 0.0202339408097979 4 {[VA]|[{I|L}G]}G{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}ASV 11 0 + 68.792 0.0 0.0 6.1278 6.1278 77.304 0.0 0.0 0.0 12.151512807197136 9.286662482156352 9.286662482156352 2.640695022458644 0 1.4604093769761874 2.0 0.4247425010840047 0.0 + + {[VA]|[{I|L}G]}G{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}ASV;{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}ASV;{[VA]|[{I|L}G]}G{[NV]|[RG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ASV;{[VA]|[{I|L}G]}GP{I|L}P{[CP]|[EA]}{I|L}ASV;{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}ASV;{[VA]|[{I|L}G]}G{I|L}[RH]DVASV;{[VA]|[{I|L}G]}G{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}SV;{[VA]|[{I|L}G]}G{I|L}PP{[CP]|[EA]}{I|L}ASV;{[VA]|[{I|L}G]}G{[NV]|[RG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}A{I|L}SV;{[VA]|[{I|L}G]}G{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}SAV 6.1278;5.8926;5.7028;5.5123;5.4676;5.2778;5.2296;5.0873;5.0728;5.0598 +;-;-;-;-;-;-;-;-;- + 4086 1 1.462 85732.7 1.0 13249 5092 18341 HBL1_DMSO_200M_050219_2,18343 HBL1_DMSO_200M_050219_2,18343,GLGGRFLFASV True True GLGGRFLFASV 98.348923 562.315112292767 2144244.25 18341.0 nc|ENSG00000134243|Q99523-2|SORT1;;ENSG00000134243|ENST00000256637|SORT1 6.701830546061198 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18345 98.354 40.0 1709500.0 25 0 205510.0 + + 37072 SLVATLQSL 9 89 466.2766893037255 930.538825674251 2 466.2769958376884 MULTI CID FTMS 0 0 0 18344 1009995.125 0.8551109157234384 -3 0.0504989624023437 1 Unmodified _TGILSIQLS_ nc|ENSG00000165949|P40305-4|IFI27;nc|ENSG00000165949|P40305-1|IFI27;ENSG00000165949|ENST00000612813|IFI27;nc|ENSG00000165949|P40305-3|IFI27 39.957323273325 0.0756908302845263 4 {[TV]|[{I|L}S]}Q{I|L} 4 -1 31.019 0.0 0.0 3.3334 0.0 0.0 0.0 486.2564824948167 486.2564824948167 4.86748654366032 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2302046884880938 0.3054621874040891 {[TV]|[{I|L}S]}Q{I|L} 3.3334 + + 461 1 1.462 59359.5 1.0 13250 5093 18344 HBL1_DMSO_200M_050219_2,18345 HBL1_DMSO_200M_050219_2,18345,TGILSIQLS False False SLVATLQSL 98.353712 466.276995837688 8087784.5 18344.0 nc|ENSG00000165949|P40305-4|IFI27;;nc|ENSG00000165949|P40305-1|IFI27;;ENSG00000165949|ENST00000612813|IFI27;;nc|ENSG00000165949|P40305-3|IFI27 3.165466785430908 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18346 98.363 523.0 217370.0 25 0 9278.3 -1 0 96 791.3727088192045 2371.096297057813 3 792.0414916872978 MULTI CID FTMS 0 0 0 18344 110622.390625 0.3330889212199773 31 -1.3926010131835938 2 4 PPPPPP{[QN]|[E{I|L}]|[KN]} 8 -1 31.658 0.0 0.0 1.3352 0.0 0.0 1528.6662732116058 0.0 1528.6662732116058 0.0 -2.498482438104208 -2.498482438104208 0.0 0 0.0 0.0 0.0 1.510574239612792 PPPPPP{[QN]|[E{I|L}]|[KN]} 1.3352 - 2275 + 1 1.462 85330.1 1.0 13251 5093 18344 HBL1_DMSO_200M_050219_2,18346 HBL1_DMSO_200M_050219_2,18346, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18347 98.374 640.0 297320.0 25 0 42156.0 + 18569 LAALVALALL 10 137 484.3307945239825 966.647036114765 2 484.3312255740166 MULTI CID FTMS 0 0 0 18344 99443.71875 0.5712294972938303 -3 0.0504989624023437 3 Unmodified _LAALVALALL_ REV__ENSG00000172901|ENST00000357872|LVRN;REV__nc|ENSG00000172901|Q6Q4G3-2|LVRN 40.44857923139169 0.1528301697436547 4 [{I|L}A]G{I|L}{I|L}A{I|L}A{I|L}{I|L} 10 -1 + 39.484 0.0 0.0 4.0847 4.0847 67.049 0.0 0.0 0.0 1.5384348516722284 11.620025851219047 1.5384348516722284 1.5384348516722284 0 0.8494850021680094 1.3010299956639813 0.0 0.0 [{I|L}A]G{I|L}{I|L}A{I|L}A{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[TP]{I|L}A{I|L}{I|L};[{I|L}A]G{I|L}{I|L}AA{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[TP]A{I|L}{I|L}{I|L};[Q{I|L}]{I|L}{I|L}A{I|L}A{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}A[TP]{I|L}{I|L}{I|L};[Q{I|L}]{I|L}{I|L}AA{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}A{I|L}{I|L}A{I|L}A{I|L}{I|L};{[VA]|[{I|L}G]}A{I|L}{I|L}AA{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}A{I|L}[TP]{I|L}{I|L} 4.0847;3.9255;3.7732;3.2981;2.5566;2.2859;2.2452;1.8645;1.5531;1.4809 -;-;-;-;-;-;-;-;-;- 1043 1 1.462 146682.6 1.0 13252 5093 18344 HBL1_DMSO_200M_050219_2,18347 HBL1_DMSO_200M_050219_2,18347,LAALVALALL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18349 98.379 85.0 901710.0 25 0 68884.0 + 44559 YPETLGRLLI 10 66 587.8450825582048 1173.6756121832095 2 587.8455688357353 MULTI CID FTMS 0 0 0 18348 690754.0625 0.8476407662498613 -2 0.0396041870117187 1 Unmodified _YPETLGRLLI_ ENSG00000103184|ENST00000251170|SEC14L5;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 53.40400417844725 0.0601721406801337 4 YPET{I|L} 5 5 71.81 0.0 0.0 6.1184 0.0 0.0 0.0 567.3634279969925 567.3634279969925 33.13940653059227 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.805462187404089 0.0 + YPET{I|L} 6.1184 + + 94 + 1 1.462 63933.4 1.0 13253 5094 18348 HBL1_DMSO_200M_050219_2,18349 HBL1_DMSO_200M_050219_2,18349,YPETLGRLLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18350 98.389 582.0 181840.0 25 0 9467.7 -1 QVLMKSQKGSL 11 141 617.8437492437668 1233.6729455543334 2 617.8424560427666 MULTI CID FTMS 0 0 0 18348 80455.9609375 0.205810794401664 -3 0.05059814453125 2 Oxidation (M) _QVLM(Oxidation (M))KSQKGSL_ ENSG00000183840|ENST00000329321|GPR39 41.95555342248728 0.1822715950200113 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}PKY{I|L} 10 -1 + 40.646 0.0 0.0 3.2947 3.2947 73.224 0.0 0.0 0.0 13.784145703911094 7.403626894942441 7.403626894942441 7.403626894942441 0 0.8252574989159953 0.8538719643217619 0.7302046884880937 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}PKY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}PK{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}[TA]{I|L}PKY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV]TV{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}[TA]{I|L}PK{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[DN]S{I|L}GKV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}HH{I|L}VQ;{[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}GG{I|L}GKV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}N{I|L}GKV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{I|L}P]K{I|L}GSTV{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 3.2947;2.6946;2.2489;2.1774;1.6488;1.5767;1.5333;1.5233;1.4754;1.454 -;-;-;-;-;-;-;-;-;- 1803 + 1 1.462 79253.1 1.0 13254 5094 18348 HBL1_DMSO_200M_050219_2,18350 HBL1_DMSO_200M_050219_2,18350,QVLMKSQKGSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18351 98.397 463.0 227150.0 25 0 37330.0 + 39418 VALHPMRP 8 107 307.5092256494138 919.5058475484414 3 307.5090209841728 MULTI CID FTMS 0 0 0 18348 123855.9765625 0.22957277671186 4 -0.2122726440429687 3 Unmodified _VALHPMRP_ REV__ENSG00000173826|ENST00000314672|KCNH6;REV__nc|ENSG00000173826|Q9H252-1|KCNH6;REV__nc|ENSG00000173826|Q9H252-2|KCNH6 8.593279151180031 0.7721714526254883 4 AV{I|L} 3 -1 40.177 0.0 0.0 4.3694 0.0 0.0 0.0 633.2931356578665 633.2931356578665 20.255762612236904 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 AV{I|L} 4.3694 - 49 + 1 1.462 88401.2 1.0 13255 5094 18348 HBL1_DMSO_200M_050219_2,18351 HBL1_DMSO_200M_050219_2,18351,VALHPMRP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18352 98.411 800.0 132890.0 25 0 11863.0 + 25308 NAFSENFLEV 10 145 585.2774027431674 1168.540252553135 2 585.2778198122978 MULTI CID FTMS 0 0 0 18348 93253.5859375 0.4794029718628266 -3 0.05059814453125 4 Unmodified _NAFSENFLEV_ ENSG00000170836|ENST00000305921|PPM1D;ENST00000392995.7_1_17:58734367-58740910:+|nuORF 75.76082778847304 0.0187510588500744 4 {[QG]|[NA]}{M(Oxidation (M))|F}SEN{M(Oxidation (M))|F} 7 3 40.93 0.0 0.0 3.5026 0.0 0.0 0.0 356.18217599369854 356.18217599369854 11.878465002703948 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.7302046884880937 1.3996498648046138 + {[QG]|[NA]}{M(Oxidation (M))|F}SEN{M(Oxidation (M))|F} 3.5026 + + 579 1 1.462 85399.1 0.4600000083446502 13256 5094 18348 HBL1_DMSO_200M_050219_2,18352 HBL1_DMSO_200M_050219_2,18352,NAFSENFLEV True True NAFSENFLEV 98.411133 585.277819812298 3298510.25 18348.0 ENSG00000170836|ENST00000305921|PPM1D;;ENST00000392995.7_1_17:58734367-58740910:+|nuORF 7.207662423451741 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18353 98.425 800.0 70687.0 25 0 1678.8 -1 0 94 1081.8581419415725 3242.5525964249173 3 1082.194750964642 MULTI CID FTMS 0 0 0 18348 87535.046875 0.6898317521372836 2 -0.1108474731445312 5 4 M{NN|[MP]|[D{I|L}]|[EV]} 3 -1 10.458 0.0 0.0 0.32251 0.0 0.0 2865.3761557261787 0.0 2865.3761557261787 0.0 3.4678748622465623 0.0 0.0 0 0.0 0.0 0.0 0.0 M{NN|[MP]|[D{I|L}]|[EV]} 0.32251 - 91 1 1.462 42848.2 0.5099999904632568 13257 5094 18348 HBL1_DMSO_200M_050219_2,18353 HBL1_DMSO_200M_050219_2,18353, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18355 98.43 39.0 2014900.0 25 0 241900.0 + 20043 LIPDIDLKL 9 66 520.3231433229602 1038.6317337127202 2 520.3239623904228 MULTI CID FTMS 0 0 0 18354 1551951.625 0.8896992886053458 4 -0.192352294921875 1 Unmodified _LIPDIDLKL_ ENSG00000173473|ENST00000254480|SMARCC1 26.268140514670165 0.1969607489560049 4 {I|L}{I|L}PD{I|L}D{I|L}K{I|L} 9 0 + 57.418 0.0 0.0 5.5282 5.5282 84.699 0.0 0.0 0.0 17.76425394070891 12.05136871872881 12.05136871872881 9.49092531119419 0 0.3807196863200844 2.0 0.0 0.0 + + {I|L}{I|L}PD{I|L}D{I|L}K{I|L};{I|L}{I|L}{I|L}[DP]D{I|L}K{I|L} 5.5282;4.6144 +;- + 188 + 1 1.467 66226.7 1.0 13258 5095 18354 HBL1_DMSO_200M_050219_2,18355 HBL1_DMSO_200M_050219_2,18355,LIPDIDLKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18356 98.432 86.0 690830.0 25 0 101040.0 + 4033 DALRSILTI 9 75 501.3032265673282 1000.5919002014564 2 501.3033935427666 MULTI CID FTMS 0 0 0 18354 526598.125 0.0048951162758789 26 -1.17108154296875 2 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 40.23920728925047 0.0741434193262949 4 [{I|L}A]DRS{I|L}{I|L}T{I|L} 9 2 + 59.587 0.0 0.0 5.9552 5.9552 73.308 0.0 0.0 0.0 0.7918124604762511 16.478174818886373 0.7918124604762511 0.7918124604762511 0 1.1677353201839438 1.5228787452803376 0.3807196863200844 0.0 [{I|L}A]DRS{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}GRS{I|L}{I|L}T{I|L};{[DA]|[EG]}{I|L}RS{I|L}{I|L}T{I|L};[{I|L}A]DR{I|L}{I|L}ST{I|L};{[QN]|[E{I|L}]|[KN]}GR{I|L}{I|L}ST{I|L};{[DA]|[EG]}{I|L}R{I|L}{I|L}ST{I|L} 5.9552;5.8761;5.3255;3.6835;3.6044;3.0538 -;-;+;-;-;- + 154 1 1.467 53214.0 1.0 13259 5095 18354 HBL1_DMSO_200M_050219_2,18356 HBL1_DMSO_200M_050219_2,18356,DALRSILTI True True DALRSILTI 98.431922 501.303393542767 5852476032.0 18354.0 ENST00000537638.6_1_12:57905855-57911076:+|nuORF;;ENSG00000166986|ENST00000262027|MARS1 4.835450808207194 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18357 98.437 291.0 242450.0 25 0 30226.0 21590 LPKPEPPQL 9 116 509.8000880035055 1017.585623073811 2 510.3001586794853 MULTI CID FTMS 0 0 0 18354 127395.109375 0.0899437234442037 22 -1.0750503540039062 3 Unmodified _LPKPEPPQL_ ENSG00000141965|ENST00000269856|FEM1A 15.847184025352805 0.4077185912009129 4 [{I|L}P]AM 4 7 16.955 0.0 0.0 1.6662 0.0 0.0 0.0 602.347072618986 602.347072618986 2.3510009525032416 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}P]AM 1.6662 - 777 1 1.467 59249.0 1.0 13260 5095 18354 HBL1_DMSO_200M_050219_2,18357 HBL1_DMSO_200M_050219_2,18357,LPKPEPPQL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18358 98.451 800.0 312230.0 25 0 23145.0 + -1 LSTVMSQL 8 133 447.73386885107954 893.4531847689591 2 447.7340576052666 MULTI CID FTMS 0 0 0 18354 111090.171875 0.2069828842057947 -5 0.1265716552734375 4 Oxidation (M) _LSTVM(Oxidation (M))SQL_ REV__ENSG00000158113|ENST00000339777|LRRC43;REV__nc|ENSG00000158113|Q8N309-2|LRRC43;REV__nc|ENSG00000158113|Q8N309-3|LRRC43 21.74664581756881 0.5868176546531598 4 {I|L}{I|L}D 3 -1 36.731 0.0 0.0 4.1111 0.0 0.0 0.0 549.2384737604124 549.2384737604124 8.341218823962109 0.0 0.0 0.0 0 0.25 0.744727494896694 0.7742275032520141 0.0 {I|L}{I|L}D 4.1111 - 238 + 1 1.467 193765.2 0.4199999868869781 13261 5095 18354 HBL1_DMSO_200M_050219_2,18358 HBL1_DMSO_200M_050219_2,18358,LSTVMSQL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18359 98.465 800.0 99610.0 25 0 16658.0 -1 0 84 1075.5261716279335 3223.556685484001 3 1075.861132800579 MULTI CID FTMS 0 0 0 18354 105521.1171875 1.0 0 0.0 5 4 H{[DS]|[MA]|[CV]|TT}MN[DP] 7 -1 22.223 0.0 0.0 0.6894 0.0 0.0 2409.1390930626426 0.0 2409.1390930626426 0.0 17.619025876622914 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 H{[DS]|[MA]|[CV]|TT}MN[DP] 0.6894 - 84 1 1.467 57196.7 0.550000011920929 13262 5095 18354 HBL1_DMSO_200M_050219_2,18359 HBL1_DMSO_200M_050219_2,18359, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18360 98.471 342.0 226100.0 25 0 31684.0 + 44271 YLLDNLTMI 9 119 548.2898399185785 1094.565126903957 2 548.2900878787041 MULTI CID FTMS 0 0 0 18354 103441.6171875 0.1217442434734994 10 -0.3429489135742187 6 Unmodified _YLLDNLTMI_ REV__L1PB1_dup6616|chr8:82292382-82293007:-|1.773853938787453|0.0196351871970747|6.5|48.0|37|3|anti-sense 14.581692164780916 0.4419739649577144 4 M{I|L}{I|L}[CS]VVSM 9 -1 49.196 0.0 0.0 4.4946 0.0 0.0 0.0 128.0720614068969 128.0720614068969 23.25434074769753 0.0 0.0 0.0 0 0.2614393726401688 0.744727494896694 0.3807196863200844 0.0 M{I|L}{I|L}[CS]VVSM 4.4946 - 1116 + 1 1.467 65853.6 1.0 13263 5095 18354 HBL1_DMSO_200M_050219_2,18360 HBL1_DMSO_200M_050219_2,18360,YLLDNLTMI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18361 98.485 800.0 221720.0 25 0 16533.0 + 17166 KLIPFLEKL 9 180 550.8572467849451 1099.69994063669 2 550.8588744997978 MULTI CID FTMS 0 0 0 18354 93611.0078125 1.0 0 0.0 7 Unmodified _KLIPFLEKL_ ENSG00000137770|ENST00000260327|CTDSPL2;nc|ENSG00000137770|Q05D32-2|CTDSPL2 47.7319792270244 0.0453426645642791 4 K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}EK{I|L} 9 0 + 60.819 0.0 0.0 5.5305 5.5305 86.151 0.0 0.0 0.0 23.24849124839885 12.587418566968154 12.587418566968154 13.348053046742711 0 1.8129529932484496 0.2757241303992109 0.9802046884880936 0.1271595765414318 + + K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}EK{I|L};K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}[VG]T{I|L};K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}{[SA]|[TG]}V{I|L};K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}RT{I|L};K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}{[SA]|[TG]}{I|L}V;K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}{[TV]|[{I|L}S]}G{I|L};K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}{[TV]|[{I|L}S]}AV;K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}S{I|L};K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}{[VA]|[{I|L}G]}TV;K{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}[SG]{I|L}{I|L} 5.5305;4.3167;4.1217;4.1166;4.0608;3.9395;3.8786;3.5673;3.5064;3.3504 +;-;-;-;-;-;-;-;-;- + 3077 + 1 1.467 138735.6 1.0 13264 5095 18354 HBL1_DMSO_200M_050219_2,18361 HBL1_DMSO_200M_050219_2,18361,KLIPFLEKL True True KLIPFLEKL 98.484966 550.858874499798 826128.125 18354.0 ENSG00000137770|ENST00000260327|CTDSPL2;;nc|ENSG00000137770|Q05D32-2|CTDSPL2 5.856676737467448 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18363 98.49 33.0 1477300.0 25 0 151300.0 + 36555 TALAQIMTI 9 76 481.27270844612616 960.5308639590525 2 481.2732726931572 MULTI CID FTMS 0 0 0 18362 1864488.625 1.0 0 0.0 1 Unmodified _TALAQIMTI_ ENSG00000097046|ENST00000234626|CDC7 71.13359017698441 0.0206607516130725 4 [TA]{I|L}AQ{I|L} 6 3 50.952 0.0 0.0 5.3046 0.0 0.0 0.0 360.15973091693803 360.15973091693803 24.24792140412361 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.5044321917401078 0.3054621874040891 + [TA]{I|L}AQ{I|L} 5.3046 + + 327 1 1.467 43309.4 1.0 13265 5096 18362 HBL1_DMSO_200M_050219_2,18363 HBL1_DMSO_200M_050219_2,18363,TALAQIMTI True True TALAQIMTI 98.489751 481.273272693157 42896262.0 18362.0 ENSG00000097046|ENST00000234626|CDC7 4.8605113824208575 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18364 98.499 542.0 230190.0 25 0 32817.0 20321 LLESYIECTM 10 123 601.2772920853854 1200.5400312375707 2 601.2772704958916 MULTI CID FTMS 0 0 0 18362 165746.671875 0.053073555942012 26 -1.1473159790039062 2 Unmodified _LLESYIECTM_ ENSG00000186141|ENST00000334163|POLR3C 30.63653989081413 0.2803493085145199 4 {[TV]|[{I|L}S]}{I|L}E 4 6 36.585 0.0 0.0 3.0474 0.0 0.0 0.0 755.2728858120425 755.2728858120425 8.828358701999157 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.8252574989159953 0.0 {[TV]|[{I|L}S]}{I|L}E 3.0474 - 490 1 1.467 95201.2 1.0 13266 5096 18362 HBL1_DMSO_200M_050219_2,18364 HBL1_DMSO_200M_050219_2,18364,LLESYIECTM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18365 98.513 800.0 199970.0 25 0 13912.0 -1 0 134 774.3749373983236 3093.470643726894 4 774.6267578005791 MULTI CID FTMS 0 0 0 18362 140386.234375 0.6811197185132614 -6 0.1865386962890625 3 4 {I|L}EH{I|L}G{I|L}Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V 11 -1 91.502 0.0 0.0 2.9579 0.0 0.0 0.0 1809.716745244788 1809.716745244788 60.625245087498925 0.0 0.0 0.0 0 1.774227503252014 1.5228787452803376 0.4247425010840047 1.2302046884880935 {I|L}EH{I|L}G{I|L}Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V 2.9579 - 1872 + 1 1.467 116097.4 0.550000011920929 13267 5096 18362 HBL1_DMSO_200M_050219_2,18365 HBL1_DMSO_200M_050219_2,18365, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18366 98.525 663.0 302320.0 25 0 38286.0 + 44786 YPLTQLVVV 9 191 516.3104467886293 1030.6063406440585 2 516.3113281130791 MULTI CID FTMS 0 0 0 18362 118350.421875 0.473535135620407 11 -0.3665618896484375 4 Unmodified _YPLTQLVVV_ ENSG00000140526|ENST00000352732|ABHD2 46.020951573049366 0.0490941689151868 4 [{I|L}T]PQY{I|L}VVV 9 4 + 45.997 0.0 0.0 4.4631 4.4631 67.886 0.0 0.0 0.0 2.6562733149009574 2.922152515121219 2.6562733149009574 1.2371250542002343 0 0.0 0.7695510786217261 2.043157681736544 0.0 [{I|L}T]PQY{I|L}VVV;[{I|L}T]QPY{I|L}VVV;{I|L}{I|L}{M(Oxidation (M))|F}TQ{I|L}VVV;[{I|L}T]PQ{I|L}YVVV;[{I|L}P]TQY{I|L}VVV;[{I|L}T]QP{I|L}YVVV;[{I|L}T]PYQ{I|L}VVV;[{I|L}T]P[AG]Y{I|L}VVV;[Q{I|L}]TPY{I|L}VVV;[{I|L}T]PQ{I|L}VYVV 4.4631;4.3431;4.2054;4.0002;3.8835;3.8801;3.7081;3.5697;3.5012;3.4877 -;-;-;-;-;-;-;-;-;- 6425 1 1.467 150436.4 1.0 13268 5096 18362 HBL1_DMSO_200M_050219_2,18366 HBL1_DMSO_200M_050219_2,18366,YPLTQLVVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18367 98.539 800.0 128700.0 25 0 7701.0 -1 0 92 1065.8462770307792 3194.5170016925376 3 1066.182910144329 MULTI CID FTMS 0 0 0 18362 98744.3125 1.0 0 0.0 5 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 65.839 0.0 0.0 2.061 0.0 0.0 0.0 2252.9730923509937 2252.9730923509937 41.3578284945207 0.0 0.0 0.0 0 2.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 2.061 - 442 1 1.467 70812.6 0.5099999904632568 13269 5096 18362 HBL1_DMSO_200M_050219_2,18367 HBL1_DMSO_200M_050219_2,18367, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18368 98.552 800.0 371370.0 25 0 25216.0 -1 0 184 917.0955245022128 2748.264744106838 3 917.431201159954 MULTI CID FTMS 0 0 0 18362 91107.5546875 0.0192849995967631 -11 0.3621826171875 6 4 [YQ]{I|L}ENY{[WT]|[RM]}[YE]E{I|L}YA{I|L}EVH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 21 -1 + 88.785 0.0 0.0 3.2306 3.2306 46.469 0.0 0.0 0.0 4.550365018407831 4.794130514992474 4.550365018407831 0.0 0 1.5 1.0457574905606752 0.0 2.635151878060192 [YQ]{I|L}ENY{[WT]|[RM]}[YE]E{I|L}YA{I|L}EVH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}ENY{[WT]|[RM]}[YE]E{I|L}YAE{I|L}VH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}ENY{[WT]|[RM]}[YE]E{I|L}Y{I|L}AEVH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}ENY{[WT]|[RM]}[YE]E{I|L}{M(Oxidation (M))|F}SKNVH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]E{I|L}NY{[WT]|[RM]}[YE]E{I|L}YA{I|L}EVH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]E{I|L}NY{[WT]|[RM]}[YE]E{I|L}YAE{I|L}VH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[H{I|L}]VEYEE[C(Carbamidomethyl (C))C]{I|L}NE{I|L}YAKNVH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}ENY{[WT]|[RM]}[YE]E{I|L}{M(Oxidation (M))|F}SE{I|L}VH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{I|L}ENY{[WT]|[RM]}[YE]E{I|L}{M(Oxidation (M))|F}S{I|L}EVH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]E{I|L}NY{[WT]|[RM]}[YE]E{I|L}Y{I|L}AEVH{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.2306;3.2306;3.1665;3.1665;3.102;3.102;3.065;3.057;3.057;3.0379 -;-;-;-;-;-;-;-;-;- 76426 1 1.467 190854.4 0.4900000095367431 13270 5096 18362 HBL1_DMSO_200M_050219_2,18368 HBL1_DMSO_200M_050219_2,18368, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18370 98.557 70.0 783820.0 25 0 80075.0 + 35131 SQYPFPVTL 9 71 526.276598494415 1050.53864405563 2 526.2770873904228 MULTI CID FTMS 0 0 0 18369 757031.375 0.907582049712185 1 -0.0340118408203125 1 Unmodified _SQYPFPVTL_ ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-2|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L 47.74868867922204 0.0453060283459952 4 {[QS]|[NT]}YP{M(Oxidation (M))|F} 5 4 34.078 0.0 0.0 3.2439 0.0 0.0 0.0 425.2401799259258 425.2401799259258 2.166739516322721 0.0 0.0 0.0 0 0.4247425010840047 0.7958800173440752 0.0 0.868415180652539 + {[QS]|[NT]}YP{M(Oxidation (M))|F} 3.2439 + + 155 1 1.467 51737.9 1.0 13271 5097 18369 HBL1_DMSO_200M_050219_2,18370 HBL1_DMSO_200M_050219_2,18370,SQYPFPVTL True True SQYPFPVTL 98.557163 526.277087390423 29553858.0 18369.0 nc|ENSG00000152061|Q5R372-4|RABGAP1L;;ENSG00000152061|ENST00000681986|RABGAP1L;;nc|ENSG00000152061|Q5R372-3|RABGAP1L;;nc|ENSG00000152061|Q5R372-2|RABGAP1L;;nc|ENSG00000152061|Q5R372|RABGAP1L 6.68534008661906 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18371 98.56 113.0 353140.0 25 0 21451.0 -1 0 50 799.6371628053679 3194.5195453550714 4 799.8888427615166 MULTI CID FTMS 0 0 0 18369 402073.1875 0.8021445230746019 1 -0.0340118408203125 2 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 65.072 0.0 0.0 2.037 0.0 0.0 0.0 2153.9133697619686 2153.9133697619686 56.11941264025134 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.037 - 54 1 1.467 38456.6 1.0 13272 5097 18369 HBL1_DMSO_200M_050219_2,18371 HBL1_DMSO_200M_050219_2,18371, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18372 98.564 245.0 346120.0 25 0 28401.0 -1 0 81 688.0731739034812 2748.2635897475247 4 688.3251220583916 MULTI CID FTMS 0 0 0 18369 298320.53125 0.0917140762963713 -8 0.2875595092773437 3 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 56.494 0.0 0.0 2.0556 0.0 0.0 0.0 1806.7174421501352 1806.7174421501352 15.234204407382656 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.6139829889124311 0.0 [H{I|L}]VEA{I|L}Y{I|L} 2.0556 - 2041 1 1.467 69887.8 1.0 13273 5097 18369 HBL1_DMSO_200M_050219_2,18372 HBL1_DMSO_200M_050219_2,18372, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18373 98.568 226.0 344360.0 25 0 50740.0 + 6543 EALHYMLLV 9 81 544.7940913414388 1087.5736297496776 2 544.7941772341728 MULTI CID FTMS 0 0 0 18369 194627.046875 0.4953215746861207 -7 0.2539520263671875 4 Unmodified _EALHYMLLV_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF 50.855029805455786 0.0384952370514206 4 [H{I|L}]{[CP]|[EA]}YM{I|L}{I|L}V 9 4 + 62.681 0.0 0.0 5.7634 5.7634 86.158 0.0 0.0 0.0 9.768762011528622 38.111658399188286 9.768762011528622 10.48455006504028 0 0.5 1.3010299956639813 1.579689690656103 0.0 [H{I|L}]{[CP]|[EA]}YM{I|L}{I|L}V;[H{I|L}]Y{[CP]|[EA]}M{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}[HA]YM{I|L}{I|L}V 5.7634;4.7994;4.7711 -;-;- 168 1 1.467 69870.4 1.0 13274 5097 18369 HBL1_DMSO_200M_050219_2,18373 HBL1_DMSO_200M_050219_2,18373,EALHYMLLV True True EALHYMLLV 98.568396 544.794177234173 7077672.5 18369.0 ENST00000428210.5_1_2:61720980-61752425:-|nuORF;;ENSG00000082898|ENST00000401558|XPO1 7.380095640818278 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18374 98.582 800.0 144430.0 25 0 11346.0 + 19996 LILEPSLYTV 10 130 574.3337868670977 1146.6530208009954 2 574.3349487185478 MULTI CID FTMS 0 0 0 18369 145923.8125 0.673646170586239 -6 0.2288589477539062 5 Unmodified _LILEPSLYTV_ ENSG00000111481|ENST00000262061|COPZ1;ENST00000551412.5_1_12:54718935-54741629:+|nuORF;ENST00000553009.5_1_12:54718935-54736154:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1 81.61307344734483 0.0157458389277943 4 {[TV]|[{I|L}S]}PY{I|L}{I|L}ES{I|L}{I|L} 10 7 + 50.13 0.0 0.0 4.3718 4.3718 67.92 0.0 0.0 0.0 4.420978532736221 7.269987279362624 4.420978532736221 1.410678576096409 0 0.0 1.3979400086720375 0.6307196863200843 0.0 {[TV]|[{I|L}S]}PY{I|L}{I|L}ES{I|L}{I|L};{[TV]|[{I|L}S]}YP{I|L}{I|L}ES{I|L}{I|L};{[TV]|[{I|L}S]}PY{I|L}E{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}P{I|L}Y{I|L}ES{I|L}{I|L};{[TV]|[{I|L}S]}YP{I|L}E{I|L}S{I|L}{I|L};[YT]VP{I|L}{I|L}ES{I|L}{I|L};{[TV]|[{I|L}S]}P{I|L}E{I|L}YS{I|L}{I|L};{[TV]|[{I|L}S]}Y{I|L}P{I|L}ES{I|L}{I|L};{[TV]|[{I|L}S]}P{I|L}YE{I|L}S{I|L}{I|L};[YT]VP{I|L}E{I|L}S{I|L}{I|L} 4.3718;4.2488;4.1093;4.0248;3.9863;3.9863;3.9569;3.9018;3.7622;3.7237 -;-;-;-;-;-;-;-;-;- 1777 1 1.467 95166.4 0.5699999928474426 13275 5097 18369 HBL1_DMSO_200M_050219_2,18374 HBL1_DMSO_200M_050219_2,18374,LILEPSLYTV True True LILEPSLYTV 98.582228 574.334948718548 4011303.25 18369.0 ENST00000551412.5_1_12:54718935-54741629:+|nuORF;;ENSG00000111481|ENST00000262061|COPZ1;;ENST00000553009.5_1_12:54718935-54736154:+|nuORF;;nc|ENSG00000111481|P61923-5|COPZ1 6.537909189860026 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18375 98.586 220.0 244410.0 25 0 23020.0 + 41984 VQMPVLDVKL 10 95 571.3365649166443 1140.6585769000883 2 571.3378173708916 MULTI CID FTMS 0 0 0 18369 129003.2421875 1.0 0 0.0 6 Unmodified _VQMPVLDVKL_ nc|ENSG00000114125|Q9UBF6-3|RNF7 27.22323531849824 0.3570408936368626 4 {[QV]|[N{I|L}]|[RA]|[KV]}M[VP]{I|L}DVK{I|L} 10 0 + 40.961 0.0 0.0 3.591 3.591 74.605 0.0 0.0 0.0 9.341153291726982 8.239087409443187 8.239087409443187 8.239087409443187 0 0.9247425010840048 0.8860566476931632 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}M[VP]{I|L}DVK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}M[VP]{I|L}D[K{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}M[VP]{I|L}[WR]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YV]K[KT]Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YV][VG]HVK{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[YV]K[YT]K{I|L};[KP][YT]K[KT]Y{I|L};[KP][YT][VG]HVK{I|L};[KP][YT]K[YT]K{I|L} 3.591;2.8687;2.2512;2.0744;1.9483;1.8799;0.33145;0.2053;0.13696 +;-;-;-;-;-;-;-;- + 294 + 1 1.467 48434.6 1.0 13276 5097 18369 HBL1_DMSO_200M_050219_2,18375 HBL1_DMSO_200M_050219_2,18375,VQMPVLDVKL False True VQMPVLDVKL 98.58639 571.337817370892 1489297.25 18369.0 nc|ENSG00000114125|Q9UBF6-3|RNF7 6.73432731628418 2.0 True 10.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 18377 98.591 43.0 1612600.0 25 0 317080.0 + 34070 SLLENLEKI 9 82 529.8086732841439 1057.6027936350877 2 529.8085204958916 MULTI CID FTMS 0 0 0 18376 1270774.625 0.828519575208984 2 -0.054412841796875 1 Unmodified _SLLENLEKI_ ENSG00000092199|ENST00000553300|HNRNPC;ENSG00000179172|ENST00000317869|HNRNPCL1;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000277058|ENST00000617807|HNRNPCL3;ENST00000553444.1_1_14:21679384-21680083:-|nuORF;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 49.55428908609986 0.0413471690215031 4 {[TV]|[{I|L}S]}{I|L}EN{I|L}EK{I|L} 9 0 + 79.906 0.0 0.0 7.5554 7.5554 90.882 0.0 0.0 0.0 4.23393743112328 11.962724883926654 4.23393743112328 9.208187539523747 0 0.805462187404089 2.0 1.1989700043360187 0.2059771852360797 + + {[TV]|[{I|L}S]}{I|L}EN{I|L}EK{I|L};{[TV]|[{I|L}S]}{I|L}EGG{I|L}EK{I|L};{[QN]|[E{I|L}]|[KN]}NE{I|L}K{I|L}{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}N{I|L}EK{I|L}{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}GGE{I|L}K{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}[KS]SEV[VP];{[QV]|[N{I|L}]|[RA]|[KV]}EE{I|L}K{I|L}{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}GG{I|L}EK{I|L}{[TV]|[{I|L}S]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{I|L}K{I|L}{[TV]|[{I|L}S]};{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}EK{I|L}{[TV]|[{I|L}S]} 7.5554;6.6847;4.6205;4.2901;3.7499;3.6726;3.4452;3.4194;3.2596;3.1147 +;-;-;-;-;-;-;-;-;- + 227 + 1 1.467 59322.5 1.0 13277 5098 18376 HBL1_DMSO_200M_050219_2,18377 HBL1_DMSO_200M_050219_2,18377,SLLENLEKI True True SLLENLEKI 98.591475 529.808520495892 23739104.0 18376.0 nc|ENSG00000092199|P07910-3|HNRNPC;;nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;ENSG00000179172|ENST00000317869|HNRNPCL1;;ENSG00000277058|ENST00000617807|HNRNPCL3;;ENSG00000275774|ENST00000621994|HNRNPCL2;;ENST00000553444.1_1_14:21679384-21680083:-|nuORF;;nc|ENSG00000092199|P07910|HNRNPC;;ENSG00000179412|ENST00000323770|HNRNPCL4 4.364231586456299 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18378 98.595 170.0 384460.0 25 0 35259.0 + 19405 LESLTLNLA 9 89 487.281666047598 972.548779161996 2 487.2820922732353 MULTI CID FTMS 0 0 0 18376 350352.125 0.8445384991046719 2 -0.054412841796875 2 Unmodified _LESLTLNLA_ ENSG00000124159|ENST00000372756|MATN4;nc|ENSG00000124159|O95460-3|MATN4;nc|ENSG00000124159|O95460-4|MATN4;nc|ENSG00000124159|O95460|MATN4 57.47134341890925 0.0274820932774257 4 [{I|L}T]D{I|L}T{I|L} 6 5 57.414 0.0 0.0 5.9035 0.0 0.0 0.0 313.152758004046 313.152758004046 32.71697743678416 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.9049471895720984 0.0 [{I|L}T]D{I|L}T{I|L} 5.9035 - 451 1 1.467 55573.3 1.0 13278 5098 18376 HBL1_DMSO_200M_050219_2,18378 HBL1_DMSO_200M_050219_2,18378,LESLTLNLA True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18379 98.601 329.0 284730.0 25 0 31617.0 + 17212 KLLEVQILEV 10 102 592.3682536063708 1182.7219542795417 2 592.3687011599541 MULTI CID FTMS 0 0 0 18376 290393.53125 0.7825199137430426 -5 0.2374649047851562 3 Unmodified _KLLEVQILEV_ ENSG00000135968|ENST00000309863|GCC2 100.0907132914201 0.0086105052902417 4 {[QN]|[E{I|L}]|[KN]}N{I|L}{I|L}K{I|L}{I|L}EV 10 5 + 98.511 0.0 0.0 8.3292 8.3292 87.252 0.0 0.0 0.0 4.771212547196626 16.53212513775344 4.771212547196626 4.771212547196626 0 0.6747425010840047 1.3979400086720375 1.079689690656103 1.1861818737241734 {[QN]|[E{I|L}]|[KN]}N{I|L}{I|L}K{I|L}{I|L}EV;{I|L}{I|L}KEVQ{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}VQ{I|L}K{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]VQ{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}{I|L}K{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}V{I|L}KQ{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}GG{I|L}{I|L}K{I|L}{I|L}EV;{I|L}{I|L}NE{I|L}K{I|L}{I|L}EV;{I|L}{I|L}QD{I|L}K{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}Q{I|L}K{I|L}{I|L}EV 8.3292;7.9258;7.8692;7.8439;7.6228;7.5737;7.5543;7.4404;7.4178;7.1628 -;-;-;-;-;-;-;-;-;- 1618 1 1.467 78651.7 1.0 13279 5098 18376 HBL1_DMSO_200M_050219_2,18379 HBL1_DMSO_200M_050219_2,18379,KLLEVQILEV True True KLLEVQILEV 98.600763 592.368701159954 6036779.5 18376.0 ENSG00000135968|ENST00000309863|GCC2 5.28983736038208 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18380 98.608 377.0 271970.0 25 0 21524.0 + 30896 RIPPWMEVV 9 105 563.8072210057469 1125.5998890782937 2 563.8074828982353 MULTI CID FTMS 0 0 0 18376 223636.109375 0.4148420455496662 -9 0.3215713500976562 4 Unmodified _RIPPWMEVV_ ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-4|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B 34.40172386719151 0.1061884637610825 4 [R{I|L}]P[WP]MEVV 9 0 + 66.405 0.0 0.0 5.8995 5.8995 86.399 0.0 0.0 0.0 18.83680593305116 51.71204671777453 18.83680593305116 9.771212547196626 0 1.2302046884880935 1.2218487496163564 0.0 0.0 + + [R{I|L}]P[WP]MEVV;[R{I|L}]P[WP]MD{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WP]P[R{I|L}]VV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WP]P[RV]{I|L}V 5.8995;5.0314;1.5383;0.67019 +;-;-;- + 238 1 1.467 88655.5 1.0 13280 5098 18376 HBL1_DMSO_200M_050219_2,18380 HBL1_DMSO_200M_050219_2,18380,RIPPWMEVV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18381 98.612 218.0 432310.0 25 0 29029.0 + 28279 PRLCLLEQV 9 106 535.8057363247569 1069.5969197163138 2 536.3074218630791 MULTI CID FTMS 0 0 0 18376 203383.875 0.5744726543794788 -7 0.2628707885742187 5 Unmodified _PRLCLLEQV_ REV__ENST00000400068.7_2_20:1918214-1918535:+|nuORF 20.41453444215458 0.284085796332423 4 {[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}{I|L}E 6 -1 34.359 0.0 0.0 3.2123 0.0 0.0 0.0 355.19400158570755 355.19400158570755 16.377765065485015 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 1.4916440611282626 {[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}{I|L}E 3.2123 - 1142 1 1.467 79701.3 1.0 13281 5098 18376 HBL1_DMSO_200M_050219_2,18381 HBL1_DMSO_200M_050219_2,18381,PRLCLLEQV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18382 98.617 312.0 444080.0 25 0 54238.0 1259 AILLSVVCVV 10 127 508.313712926504 1014.612872919808 2 508.3137390017509 MULTI CID FTMS 0 0 0 18376 181572.203125 0.8875793422594195 -6 0.2518768310546875 6 Unmodified _AILLSVVCVV_ ENSG00000070961|ENST00000428670|ATP2B1;nc|ENSG00000070961|P20020-1|ATP2B1;nc|ENSG00000070961|P20020-2|ATP2B1;nc|ENSG00000070961|P20020-4|ATP2B1;nc|ENSG00000070961|P20020-5|ATP2B1;nc|ENSG00000070961|P20020-6|ATP2B1 26.88365393820708 0.3646707531412818 4 [{I|L}A]{I|L}DP{I|L}{M(Oxidation (M))|F}KV 9 6 + 65.442 0.0 0.0 6.4499 6.4499 85.915 0.0 0.0 0.0 17.23431669223531 12.98332479720628 12.98332479720628 8.634993639681312 0 0.6861818737241735 2.0 0.0 0.1747425010840047 [{I|L}A]{I|L}DP{I|L}{M(Oxidation (M))|F}KV;[{I|L}A]VEP{I|L}{M(Oxidation (M))|F}KV;[{I|L}A]{I|L}PD{I|L}{M(Oxidation (M))|F}KV;[{I|L}A]{I|L}{I|L}[DP]{M(Oxidation (M))|F}KV;[{I|L}P]S{I|L}N{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}P{I|L}N{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]D[KA]{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}P[KA]{I|L}{I|L}{M(Oxidation (M))|F}V;[VP]T{I|L}N{I|L}{I|L}{M(Oxidation (M))|F}V 6.4499;5.5989;5.5599;5.3184;3.6299;3.0646;2.9851;2.8134;2.5478;2.5212 -;-;-;-;-;-;-;-;-;- 1521 + 1 1.467 110913.1 1.0 13282 5098 18376 HBL1_DMSO_200M_050219_2,18382 HBL1_DMSO_200M_050219_2,18382,AILLSVVCVV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18384 98.622 69.0 1109700.0 25 0 130580.0 + 20621 LLPPPIAPL 9 94 465.8047078018629 929.5948626705258 2 465.8050414919853 MULTI CID FTMS 0 0 0 18383 616812.1875 0.4855744606105872 14 -0.65283203125 1 Unmodified _LLPPPIAPL_ ENSG00000136378|ENST00000388820|ADAMTS7 56.04830969593885 0.0282699710924866 4 {I|L}{I|L}PPP{I|L}PA{I|L} 9 2 + 61.367 0.0 0.0 6.6015 6.6015 91.314 0.0 0.0 0.0 36.41827190205533 14.436974992327125 14.436974992327125 18.244171855527966 0 1.055462187404089 1.6989700043360187 0.0 0.0 {I|L}{I|L}PPP{I|L}PA{I|L};{I|L}{I|L}[YK]{I|L}PA{I|L} 6.6015;4.6389 -;- 345 + 1 1.467 66212.0 1.0 13283 5099 18383 HBL1_DMSO_200M_050219_2,18384 HBL1_DMSO_200M_050219_2,18384,LLPPPIAPL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18385 98.628 298.0 296060.0 25 0 64598.0 -1 VIEMCQLL 8 103 511.2563951783344 1020.4982374234688 2 511.2579528689384 MULTI CID FTMS 0 0 0 18383 189552.890625 0.8210473974516868 -1 0.0309600830078125 2 Carbamidomethyl (C),Oxidation (M) _VIEM(Oxidation (M))C(Carbamidomethyl (C))QLL_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 19.438996006549623 0.6237395211498085 4 {I|L}D{I|L}R{I|L}{I|L} 6 -1 34.456 0.0 0.0 3.3763 0.0 0.0 279.03502089668126 0.0 279.03502089668126 0.0 13.02887198244136 0.0 0.0 0 0.3252574989159953 0.0 0.7302046884880937 0.0 {I|L}D{I|L}R{I|L}{I|L} 3.3763 - 252 1 1.467 76375.7 1.0 13284 5099 18383 HBL1_DMSO_200M_050219_2,18385 HBL1_DMSO_200M_050219_2,18385,VIEMCQLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18386 98.641 761.0 194540.0 25 0 9948.3 -1 0 108 791.3727088192045 2371.096297057813 3 791.7086059451103 MULTI CID FTMS 0 0 0 18383 143767.265625 0.2958891462243612 37 -1.7045059204101562 3 4 {[HG]|PP}APPGDCNRAGMPPAPPPPPP{[QN]|[E{I|L}]|[KN]} 24 -1 {[HG]|PP}APPGDCNRAGM + + 53.898 45.375 3.5911 2.2731 2.2731 44.823 0.0 0.0 0.0 0.0 8.523140665456097 0.0 0.0 0 0.9247425010840048 0.0 0.25 1.927825934852436 {[HG]|PP}APPGDCNRAGMPPAPPPPPP{[QN]|[E{I|L}]|[KN]} 2.2731 - 27812 + 1 1.467 109814.6 1.0 13285 5099 18383 HBL1_DMSO_200M_050219_2,18386 HBL1_DMSO_200M_050219_2,18386, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18388 98.647 177.0 484530.0 25 0 35709.0 + 44560 YPETLGRLLI 10 82 587.8450825582048 1173.6756121832095 2 587.8455078005791 MULTI CID FTMS 0 0 0 18387 365210.375 0.4481583517395515 4 -0.0979843139648437 1 Unmodified _YPETLGRLLI_ ENSG00000103184|ENST00000251170|SEC14L5;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 71.70789743142352 0.0188816056000227 4 YPET{I|L} 5 5 78.047 0.0 0.0 6.6498 0.0 0.0 0.0 567.3632256003191 567.3632256003191 44.935697414214594 0.0 0.0 0.0 0 1.1549471895720984 1.6989700043360187 1.1549471895720984 0.0 + YPET{I|L} 6.6498 + + 174 + 1 1.467 69708.6 1.0 13286 5100 18387 HBL1_DMSO_200M_050219_2,18388 HBL1_DMSO_200M_050219_2,18388,YPETLGRLLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18389 98.651 227.0 304090.0 25 0 26990.0 -1 QVLMKSQKGSL 11 94 617.8437492437668 1233.6729455543334 2 617.8445922732353 MULTI CID FTMS 0 0 0 18387 312079.875 0.7983175670528238 3 -0.0614089965820312 2 Oxidation (M) _QVLM(Oxidation (M))KSQKGSL_ ENSG00000183840|ENST00000329321|GPR39 34.93206674587334 0.2904649469012649 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV]{[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 10 -1 + 35.804 0.0 0.0 2.9022 2.9022 73.145 0.0 0.0 0.0 2.1666305970097 9.35051277207819 2.1666305970097 8.507112333562858 0 0.8807196863200843 1.154901959985743 0.4247425010840047 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV]{[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[RV][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}{[TV]|[{I|L}S]};[{I|L}P]K{[VA]|[{I|L}G]}S{[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[{I|L}P]EKK{[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[{I|L}P]K{[VA]|[{I|L}G]}S[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}{[TV]|[{I|L}S]};[KP]{I|L}{[VA]|[{I|L}G]}S{[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}];[{I|L}P]EKK[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}{[TV]|[{I|L}S]};[{I|L}P]K{[VA]|[{I|L}G]}{[WT]|[RM]}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}] 2.9022;2.2127;1.3106;1.2186;0.62107;0.5579;0.52906;0.46902 -;-;-;-;-;-;-;- 364 1 1.467 55733.6 1.0 13287 5100 18387 HBL1_DMSO_200M_050219_2,18389 HBL1_DMSO_200M_050219_2,18389,QVLMKSQKGSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18390 98.654 117.0 770570.0 25 0 149000.0 + 34737 SPYPWPLNHI 10 79 612.3143340079008 1222.6141150826015 2 612.3143798708916 MULTI CID FTMS 0 0 0 18387 369702.0625 0.902357134003909 -5 0.2158050537109375 3 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 65.23502041540118 0.0228537820337083 4 [PS]YPW{I|L}PV[HQ] 10 4 + 67.132 0.0 0.0 5.4908 5.4908 78.436 0.0 0.0 0.0 17.058546584526795 4.771212547196626 4.771212547196626 4.771212547196626 0 0.75 1.5228787452803376 0.0 1.1549471895720984 [PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PN[H{I|L}];[PS]YPW{I|L}PGG[H{I|L}] 5.4908;5.1006;3.4063 -;-;- 169 + 1 1.467 72017.3 1.0 13288 5100 18387 HBL1_DMSO_200M_050219_2,18390 HBL1_DMSO_200M_050219_2,18390,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18391 98.659 303.0 292580.0 25 0 31206.0 + 3026 AVLDLSWNKL 10 123 579.8289128859975 1157.643272838795 2 579.8299438357353 MULTI CID FTMS 0 0 0 18387 191627.0 0.5604392511030448 -5 0.2158050537109375 4 Unmodified _AVLDLSWNKL_ ENSG00000136045|ENST00000412830|PWP1 89.40071534611396 0.0093765175072318 4 {[VA]|[{I|L}G]}{I|L}D{I|L}SWNK{I|L} 10 0 + 108.12 0.0 0.0 9.3399 9.3399 92.713 0.0 0.0 0.0 70.97750326371255 10.0 10.0 9.164539485499247 0 1.392159058960253 2.0 1.274227503252014 1.031234684152075 + + {[VA]|[{I|L}G]}{I|L}D{I|L}SWNK{I|L};{[VA]|[{I|L}G]}{I|L}D{I|L}SWGGK{I|L};{[VA]|[{I|L}G]}{I|L}D{I|L}[KC]N{I|L}{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}{I|L}D{I|L}G[C(Carbamidomethyl (C))K]{I|L}{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}{I|L}D{I|L}[KC]GG{I|L}{[VA]|[{I|L}G]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}G{I|L}[KC]N{I|L}{[VA]|[{I|L}G]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}G{I|L}G[C(Carbamidomethyl (C))K]{I|L}{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}{I|L}D{[ET]|[MV]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}{I|L}D{I|L}{I|L}{I|L}[EC]{[VA]|[{I|L}G]};{[VA]|[{I|L}G]}CN[K{I|L}]{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[VA]|[{I|L}G]} 9.3399;8.5482;3.8135;3.7055;3.0249;2.8859;2.778;2.7778;2.6059;2.4759 +;-;-;-;-;-;-;-;-;- + 705 + 1 1.467 75324.1 1.0 13289 5100 18387 HBL1_DMSO_200M_050219_2,18391 HBL1_DMSO_200M_050219_2,18391,AVLDLSWNKL True True AVLDLSWNKL 98.65905 579.829943835735 5539569.0 18387.0 ENSG00000136045|ENST00000412830|PWP1 7.499627749125163 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18393 98.674 631.0 147890.0 25 0 13629.0 + 25309 NAFSENFLEV 10 125 585.2774027431674 1168.540252553135 2 585.2780639529228 MULTI CID FTMS 0 0 0 18392 109493.375 0.5628893392847274 4 -0.10888671875 1 Unmodified _NAFSENFLEV_ ENSG00000170836|ENST00000305921|PPM1D;ENST00000392995.7_1_17:58734367-58740910:+|nuORF 49.93300154707207 0.0805441195901191 4 {[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C)){[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F} 6 7 29.939 0.0 0.0 2.5621 0.0 0.0 0.0 356.18104306526305 356.18104306526305 14.359643208523368 0.0 0.0 0.0 0 0.0 1.0 0.6989700043360187 0.805462187404089 {[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C)){[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F} 2.5621 - 687 1 1.474 74747.4 1.0 13290 5101 18392 HBL1_DMSO_200M_050219_2,18393 HBL1_DMSO_200M_050219_2,18393,NAFSENFLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18394 98.676 103.0 602760.0 25 0 44929.0 + 14318 LLNEILEQV 9 86 535.8057363247569 1069.5969197163138 2 535.8087036013603 MULTI CID FTMS 0 0 0 18392 354875.1875 0.6655951270678804 -3 0.0726699829101562 2 Unmodified _IENRVRGNL_ ENSG00000109805|ENST00000251496|NCAPG 21.74664581756881 0.2544899275067181 4 {[QN]|[E{I|L}]|[KN]}N{I|L}{I|L}{I|L} 6 5 41.177 0.0 0.0 3.8498 0.0 0.0 0.0 371.1520093982076 371.1520093982076 23.28508689054182 0.0 0.0 0.0 0 0.0 1.0 0.3494850021680094 1.1307196863200843 {[QN]|[E{I|L}]|[KN]}N{I|L}{I|L}{I|L} 3.8498 - 397 1 1.474 56026.4 1.0 13291 5101 18392 HBL1_DMSO_200M_050219_2,18394 HBL1_DMSO_200M_050219_2,18394,IENRVRGNL False False LLNEILEQV 98.67616 535.80870360136 4274250.5 18392.0 ENSG00000109805|ENST00000251496|NCAPG 1.9135844111442568 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18396 98.685 376.0 266430.0 25 0 38148.0 + 35877 SVLNVLHSL 9 114 491.2902326688864 980.5659124045728 2 491.2899963259697 MULTI CID FTMS 0 0 0 18395 126204.421875 0.0553352755721843 -7 0.2511672973632812 1 Unmodified _SVLNVLHSL_ ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L 60.07390631473393 0.0260411565414776 4 [VS]{I|L}NV{I|L}HS{I|L} 9 0 + 83.699 0.0 0.0 8.5358 8.5358 95.094 0.0 0.0 0.0 53.70136407310822 21.75721121498312 21.75721121498312 13.015384402724592 0 1.055462187404089 2.0 1.34733495922753 0.3807196863200844 + + [VS]{I|L}NV{I|L}HS{I|L};[VS]{I|L}GGV{I|L}HS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}QN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{I|L}VN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VGG{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}VAAVN{I|L}[PA];{[NV]|[RG]}{I|L}{I|L}QN{I|L}[PA];{[NV]|[RG]}AA{I|L}VN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}QGG{I|L}[PA] 8.5358;7.2084;4.973;4.052;4.0339;4.0339;3.5473;3.3554;3.3373;3.1129 +;-;-;-;-;-;-;-;-;- + 864 + 1 1.474 82864.8 1.0 13292 5102 18395 HBL1_DMSO_200M_050219_2,18396 HBL1_DMSO_200M_050219_2,18396,SVLNVLHSL True True SVLNVLHSL 98.685446 491.28999632597 50244873.0 18395.0 nc|ENSG00000100129|Q9Y262-2|EIF3L;;ENSG00000100129|ENST00000652021|EIF3L 6.215669631958008 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18397 98.688 146.0 604200.0 25 0 82968.0 + 15300 IPISNILMV 9 105 508.296204632002 1014.577856330804 2 508.2962219119072 MULTI CID FTMS 0 0 0 18395 213599.28125 0.1966352169703391 -7 0.2511672973632812 2 Oxidation (M) _IPISNILM(Oxidation (M))V_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 52.268347100219714 0.0353964759249114 4 [{I|L}P]S{I|L}N{I|L}{I|L}{M(Oxidation (M))|F}V 9 2 + 50.524 0.0 0.0 4.9798 4.9798 76.544 0.0 0.0 0.0 8.979400086720375 2.925515300088435 2.925515300088435 5.044321917401078 0 1.3424778212679485 1.3010299956639813 0.8252574989159953 0.3494850021680094 [{I|L}P]S{I|L}N{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]D[KA]{I|L}{I|L}{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}P[KA]{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]S{I|L}N{I|L}Y[VP];{[TV]|[{I|L}S]}{I|L}PN{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}NP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]S{I|L}GG{I|L}{I|L}{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}[KA]P{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}N{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V 4.9798;4.4827;4.3915;4.0948;4.0489;3.9205;3.7705;3.7278;3.6245;3.5969 -;-;-;-;-;-;-;-;-;- 927 1 1.474 72706.6 1.0 13293 5102 18395 HBL1_DMSO_200M_050219_2,18397 HBL1_DMSO_200M_050219_2,18397,IPISNILMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18398 98.702 800.0 54267.0 25 0 1771.7 -1 0 76 1081.8581419415725 3242.5525964249173 3 1082.193774402142 MULTI CID FTMS 0 0 0 18395 75378.4453125 0.5940300126595013 10 -0.5520553588867188 3 4 NTM[EP] 5 -1 19.208 0.0 0.0 0.59238 0.0 0.0 2652.248071413428 0.0 2652.248071413428 0.0 12.21848749616356 0.0 0.0 0 0.0 0.0 0.0 0.0 NTM[EP] 0.59238 - 79 1 1.474 35316.1 0.449999988079071 13294 5102 18395 HBL1_DMSO_200M_050219_2,18398 HBL1_DMSO_200M_050219_2,18398, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18400 98.707 74.0 1016900.0 25 0 127380.0 + 20044 LIPDIDLKL 9 66 520.3231433229602 1038.6317337127202 2 520.3240844607353 MULTI CID FTMS 0 0 0 18399 675019.0625 0.3869733888782116 12 -0.7167739868164062 1 Unmodified _LIPDIDLKL_ ENSG00000173473|ENST00000254480|SMARCC1 32.78568957990786 0.1150597335874693 4 {I|L}{I|L}PD{I|L}D{I|L}K{I|L} 9 0 + 64.135 0.0 0.0 6.1749 6.1749 89.45 0.0 0.0 0.0 15.485002360903836 12.98332479720628 12.98332479720628 16.74865027867405 0 0.3807196863200844 2.0 0.0 0.3494850021680094 + + {I|L}{I|L}PD{I|L}D{I|L}K{I|L};{I|L}{I|L}{I|L}[DP]D{I|L}K{I|L} 6.1749;4.5624 +;- + 174 + 1 1.474 64029.3 1.0 13295 5103 18399 HBL1_DMSO_200M_050219_2,18400 HBL1_DMSO_200M_050219_2,18400,LIPDIDLKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18401 98.71 124.0 469330.0 25 0 74186.0 + 4034 DALRSILTI 9 84 501.3032265673282 1000.5919002014564 2 501.3030273318291 MULTI CID FTMS 0 0 0 18399 471926.03125 0.0043868990163662 34 -1.6703720092773438 2 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 36.506200033944 0.094635877243972 4 {[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}{I|L}T{I|L} 9 3 + 60.34 0.0 0.0 6.0304 6.0304 80.438 0.0 0.0 0.0 4.769987279362624 16.478174818886373 4.769987279362624 4.769987279362624 0 0.5 1.3979400086720375 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}D{I|L}T{I|L};[{I|L}A][RD]S{I|L}{I|L}T{I|L};{[DA]|[EG]}[R{I|L}]S{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}{I|L}DT{I|L};[{I|L}T]{I|L}{[NV]|[RG]}S{I|L}E{I|L};[{I|L}T]{I|L}{[NV]|[RG]}{I|L}SE{I|L};{[CP]|[EA]}[RV]S{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}N[KS]{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}W[KS]{I|L} 6.0304;5.5537;5.3696;5.2527;4.952;4.4523;4.1514;3.8804;3.0041;2.2316 -;-;-;+;-;-;-;-;-;- + 277 1 1.474 49511.8 1.0 13296 5103 18399 HBL1_DMSO_200M_050219_2,18401 HBL1_DMSO_200M_050219_2,18401,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18402 98.713 182.0 690790.0 25 0 67045.0 + 14589 IIDGGSGYL 9 91 447.73386885107954 893.4531847689591 2 447.7340270876884 MULTI CID FTMS 0 0 0 18399 408746.9375 0.7615761017026128 3 -0.094940185546875 3 Unmodified _IIDGGSGYL_ ENSG00000095713|ENST00000370597|CRTAC1;nc|ENSG00000095713|Q9NQ79-2|CRTAC1;nc|ENSG00000095713|Q9NQ79-3|CRTAC1 34.10243960390752 0.1078313939113124 4 {I|L}{I|L}D 3 6 30.991 0.0 0.0 3.4687 0.0 0.0 0.0 549.2345675104124 549.2345675104124 4.335820649000421 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.7302046884880937 0.0 + {I|L}{I|L}D 3.4687 + + 145 + 1 1.474 102323.4 1.0 13297 5103 18399 HBL1_DMSO_200M_050219_2,18402 HBL1_DMSO_200M_050219_2,18402,IIDGGSGYL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18403 98.725 682.0 215680.0 25 0 40435.0 5109 DIAWFQILL 9 119 559.8135369572796 1117.612520981359 2 559.8124877810478 MULTI CID FTMS 0 0 0 18399 112414.9375 0.1237731934656382 -6 0.1498336791992187 4 Unmodified _DIAWFQILL_ nc|ENSG00000135903|P23760-8|PAX3 24.020572477871973 0.2255576514309169 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[PS]VD{I|L}{I|L}{I|L} 10 7 + 61.515 0.0 0.0 5.5041 5.5041 84.555 0.0 0.0 0.0 9.342794415576634 14.465839472252084 9.342794415576634 9.342794415576634 0 0.5 1.0 0.0 0.6549471895720985 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q[PS]VD{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}T{[MS]|[{M(Oxidation (M))|F}A]}VD{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}Q{[MS]|[{M(Oxidation (M))|F}A]}VD{I|L}{I|L}{I|L};{[QS]|[NT]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}VD{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG][PS]VD{I|L}{I|L}{I|L};[Y{M(Oxidation (M))|F}][HV]VD{I|L}{I|L}{I|L};[KA]E{[MS]|[{M(Oxidation (M))|F}A]}VD{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}[AG]{[MS]|[{M(Oxidation (M))|F}A]}VD{I|L}{I|L}{I|L};[Q{I|L}]S{[MS]|[{M(Oxidation (M))|F}A]}VD{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}GT{[MS]|[{M(Oxidation (M))|F}A]}VD{I|L}{I|L}{I|L} 5.5041;4.6682;4.6373;4.1372;4.0981;3.9257;3.556;3.4766;3.4692;2.9089 -;-;-;-;-;-;-;-;-;- 658 1 1.474 113162.6 1.0 13298 5103 18399 HBL1_DMSO_200M_050219_2,18403 HBL1_DMSO_200M_050219_2,18403,DIAWFQILL False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 18404 98.739 800.0 109620.0 25 0 5938.4 + 26510 NVFEGFYGV 9 98 1031.482689451204 1030.475412984604 1 1032.488940417767 MULTI CID FTMS 0 0 0 18399 73163.3359375 0.8367882203352726 5 -0.2196121215820312 5 Unmodified _NVFEGFYGV_ ENSG00000162769|ENST00000366971|FLVCR1 24.020572477871973 0.2255576514309169 4 GY{M(Oxidation (M))|F}G[C(Carbamidomethyl (C))S]KP 8 7 24.968 0.0 0.0 2.423 0.0 0.0 116.07790429495395 0.0 116.07790429495395 0.0 1.4118371575939117 0.0 0.0 0 0.1747425010840047 0.0 0.7625305739907814 0.6237125054200234 GY{M(Oxidation (M))|F}G[C(Carbamidomethyl (C))S]KP 2.423 - 1381 + 1 1.474 63441.0 0.449999988079071 13299 5103 18399 HBL1_DMSO_200M_050219_2,18404 HBL1_DMSO_200M_050219_2,18404,NVFEGFYGV False True NVFEGFYGV 98.738793 1032.48894041777 532547.5 18399.0 ENSG00000162769|ENST00000366971|FLVCR1 2.590155760447184 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18406 98.746 150.0 500860.0 25 0 62339.0 + 34454 SLYKSFLQL 9 97 549.8140077068142 1097.6134624804283 2 549.8146850466728 MULTI CID FTMS 0 0 0 18405 278372.21875 0.8675662643468095 -2 0.0626220703125 1 Unmodified _SLYKSFLQL_ ENSG00000185883|ENST00000330398|ATP6V0C 47.74868867922204 0.0453060283459952 4 {[TV]|[{I|L}S]}[YK]{M(Oxidation (M))|F}S{I|L}[Q{I|L}] 9 2 + 44.798 0.0 0.0 4.0814 4.0814 80.364 0.0 0.0 0.0 17.55535896144984 23.87726867220145 17.55535896144984 13.4196937665947 0 0.7059771852360797 2.0 0.7614393726401688 0.0 {[TV]|[{I|L}S]}[YK]{M(Oxidation (M))|F}S{I|L}[Q{I|L}];{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]G{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}S{[RE]|[WV]}HVV;[YK][{I|L}A]YS{I|L}[Q{I|L}];{[TV]|[{I|L}S]}[YK]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}{I|L}[WP]S{I|L}[Q{I|L}];[Q{I|L}][H{I|L}]{M(Oxidation (M))|F}S{I|L}[Q{I|L}];[YK]{[TV]|[{I|L}S]}{M(Oxidation (M))|F}S{I|L}[Q{I|L}];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}S{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[K{I|L}]YS{I|L}[Q{I|L}] 4.0814;2.8587;2.477;2.2749;2.2122;2.2039;2.1622;1.9124;1.8402;1.6381 -;-;-;-;-;-;-;-;-;- 421 1 1.474 63983.9 1.0 13300 5104 18405 HBL1_DMSO_200M_050219_2,18406 HBL1_DMSO_200M_050219_2,18406,SLYKSFLQL True True SLYKSFLQL 98.74566 549.814685046673 2720473.0 18405.0 ENSG00000185883|ENST00000330398|ATP6V0C -0.2679232756296794 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18407 98.756 568.0 216450.0 25 0 28625.0 + 9867 FPFGYVSNI 9 149 522.2631012076528 1042.5116494821054 2 522.2634765505791 MULTI CID FTMS 0 0 0 18405 152394.375 0.4236475061488839 34 -1.6903152465820312 2 Unmodified _FPFGYVSNI_ ENSG00000159259|ENST00000314103|CHAF1B;ENST00000481458.1_1_21:37771819-37785123:+|nuORF 59.79521254764295 0.0261954583213598 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}VS{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 51.565 0.0 0.0 4.9462 4.9462 76.032 0.0 0.0 0.0 18.116742845273063 30.37613402722933 18.116742845273063 4.771212547196626 0 0.2742275032520141 1.6989700043360187 0.5 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GY{M(Oxidation (M))|F}VS{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{M(Oxidation (M))|F}YVS{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GYV{M(Oxidation (M))|F}S{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}GYVS{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GVY{M(Oxidation (M))|F}S{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[TA]{M(Oxidation (M))|F}S{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YR]{M(Oxidation (M))|F}S{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[YK]D{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GYG[Y{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[YR]S{[QV]|[N{I|L}]|[RA]|[KV]} 4.9462;4.4885;4.4885;4.1998;3.911;2.6899;2.646;2.5727;2.5701;2.5262 -;-;-;+;-;-;-;-;-;- + 1891 1 1.474 101514.6 1.0 13301 5104 18405 HBL1_DMSO_200M_050219_2,18407 HBL1_DMSO_200M_050219_2,18407,FPFGYVSNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18408 98.768 710.0 398490.0 25 0 32245.0 + 21109 LPALLQQL 8 141 448.2837780329502 894.5530031327004 2 448.2835876345634 MULTI CID FTMS 0 0 0 18405 119369.8515625 0.5451129302938885 -5 0.1214370727539062 3 Unmodified _LPALLQQL_ ENSG00000179262|ENST00000586534|RAD23A;nc|ENSG00000179262|P54725-2|RAD23A;nc|ENSG00000179262|P54725-3|RAD23A 45.7499826716795 0.1592378023510922 4 [{I|L}P]A{I|L}{I|L}QQ{I|L} 8 0 + 38.995 0.0 0.0 4.3591 4.3591 69.16 0.0 0.0 0.0 5.228787452803374 6.409328277719766 5.228787452803374 2.0289375146764854 0 0.5172203223519531 1.2218487496163564 0.0 0.0 + + [{I|L}P]A{I|L}{I|L}QQ{I|L};[{I|L}P]A{I|L}Q{I|L}Q{I|L};[PA]{I|L}{I|L}{I|L}QQ{I|L};[PA]{I|L}{I|L}Q{I|L}Q{I|L};[{I|L}P]A{I|L}{I|L}[AG]Q{I|L};[{I|L}P]A{I|L}QQ{I|L}{I|L};[{I|L}P]A{I|L}[AG]{I|L}Q{I|L};[PA]{I|L}{I|L}{I|L}[AG]Q{I|L};[PA]{I|L}{I|L}QQ{I|L}{I|L};[PA]{I|L}{I|L}[AG]{I|L}Q{I|L} 4.3591;4.1323;3.7746;3.5478;3.3237;3.2176;2.7904;2.7392;2.6331;2.2059 +;-;-;-;-;-;-;-;-;- + 673 1 1.474 221300.6 1.0 13302 5104 18405 HBL1_DMSO_200M_050219_2,18408 HBL1_DMSO_200M_050219_2,18408,LPALLQQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18410 98.773 80.0 562750.0 25 0 63548.0 + 36556 TALAQIMTI 9 67 481.27270844612616 960.5308639590525 2 481.2731506228447 MULTI CID FTMS 0 0 0 18409 643101.9375 0.3449213520945991 9 -0.5835952758789062 1 Unmodified _TALAQIMTI_ ENSG00000097046|ENST00000234626|CDC7 61.357469665136826 0.0253304979873734 4 [TA]{I|L}AQ{I|L} 6 3 50.2 0.0 0.0 5.2262 0.0 0.0 0.0 360.15766994953987 360.15766994953987 22.84826562528984 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.3539171939081172 0.3807196863200844 + [TA]{I|L}AQ{I|L} 5.2262 + + 304 1 1.474 38871.8 1.0 13303 5105 18409 HBL1_DMSO_200M_050219_2,18410 HBL1_DMSO_200M_050219_2,18410,TALAQIMTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18411 98.787 800.0 150350.0 25 0 6196.4 -1 0 119 774.3749373983236 3093.470643726894 4 774.6266357302666 MULTI CID FTMS 0 0 0 18409 125348.3046875 0.6081593568270003 3 -0.1538772583007812 2 4 {[QN]|[E{I|L}]|[KN]}G{I|L}H{I|L}Y{I|L}V 9 -1 71.833 0.0 0.0 2.3221 0.0 0.0 0.0 2052.858558115819 2052.858558115819 42.447274948966935 0.0 0.0 0.0 0 2.5 1.5228787452803376 0.0 0.0 {[QN]|[E{I|L}]|[KN]}G{I|L}H{I|L}Y{I|L}V 2.3221 - 1239 1 1.474 92105.8 0.5600000023841858 13304 5105 18409 HBL1_DMSO_200M_050219_2,18411 HBL1_DMSO_200M_050219_2,18411, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18412 98.79 168.0 226720.0 25 0 24738.0 + 39067 TVVPDEDFVLV 11 62 616.8244773410231 1231.634401748846 2 616.8250610232353 MULTI CID FTMS 0 0 0 18409 138859.09375 0.5894324437884128 -3 0.0917816162109375 3 Unmodified _TVVPDEDFVLV_ ENSG00000176170|ENST00000592299|SPHK1;nc|ENSG00000176170|Q9NYA1-2|SPHK1;nc|ENSG00000176170|Q9NYA1-3|SPHK1 22.736283301280096 0.5583477779825423 4 [DP]ED{M(Oxidation (M))|F}VTV 8 4 35.087 0.0 0.0 2.8488 0.0 0.0 0.0 326.2092109573179 326.2092109573179 7.639275466122015 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 [DP]ED{M(Oxidation (M))|F}VTV 2.8488 - 122 1 1.474 35609.7 1.0 13305 5105 18409 HBL1_DMSO_200M_050219_2,18412 HBL1_DMSO_200M_050219_2,18412,TVVPDEDFVLV False True TVVPDEDFVLV 98.789859 616.825061023235 2487789.5 18409.0 ENSG00000176170|ENST00000592299|SPHK1;;nc|ENSG00000176170|Q9NYA1-2|SPHK1;;nc|ENSG00000176170|Q9NYA1-3|SPHK1 6.340234597524007 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18413 98.797 407.0 233830.0 25 0 26716.0 + 45581 YVEPLKLYL 9 111 569.3313930818392 1136.6482332304784 2 569.3320800662041 MULTI CID FTMS 0 0 0 18409 103012.4765625 0.9905946972790268 -1 0.0291595458984375 4 Unmodified _YVEPLKLYL_ ENSG00000120837|ENST00000240055|NFYB 43.85829265575387 0.0542763391141878 4 [YV]EP{I|L}[K{I|L}]Y{I|L} 9 0 + 50.071 0.0 0.0 4.4052 4.4052 76.574 0.0 0.0 0.0 15.255310316373349 6.237169151620243 6.237169151620243 7.23142367142291 0 1.066901560044258 2.0 0.5 0.0 + + [YV]EP{I|L}[K{I|L}]Y{I|L};[YV]EP{I|L}[YK]{I|L}{I|L};[{I|L}P]K{I|L}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M{I|L};[{I|L}P]K{I|L}E[Y{I|L}]YV;[{I|L}P]K{I|L}E[YV][Y{I|L}];[{I|L}P]KE{I|L}[Y{I|L}]YV;[{I|L}P]KE{I|L}[YV][Y{I|L}];[{I|L}P]K{I|L}Y{[QN]|[E{I|L}]|[KN]}YV;[{I|L}P]K{I|L}Y{NN|[MP]|[D{I|L}]|[EV]}[Y{I|L}];[K{I|L}]P{I|L}Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M{I|L} 4.4052;3.769;3.1881;3.0905;2.8868;2.847;2.6433;2.4957;2.292;1.6934 +;-;-;-;-;-;-;-;-;- + 382 + 1 1.474 77177.3 1.0 13306 5105 18409 HBL1_DMSO_200M_050219_2,18413 HBL1_DMSO_200M_050219_2,18413,YVEPLKLYL True True YVEPLKLYL 98.797135 569.332080066204 1343597.625 18409.0 ENSG00000120837|ENST00000240055|NFYB 4.5541032155354815 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18415 98.802 17.0 4643600.0 25 0 430340.0 -1 0 68 917.0955245022128 2748.264744106838 3 917.431689441204 MULTI CID FTMS 0 0 0 18414 4479237.5 0.9481331562195688 -1 0.029205322265625 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 58.822 0.0 0.0 2.1403 0.0 0.0 0.0 1707.6531899674374 1707.6531899674374 4.882287586051106 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.1403 - 471 1 1.474 62642.2 1.0 13307 5106 18414 HBL1_DMSO_200M_050219_2,18415 HBL1_DMSO_200M_050219_2,18415, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18416 98.816 800.0 139550.0 25 0 9166.5 + + 1402 GVVTDLITVGLK 12 128 607.8716526591029 1213.7287523850057 2 607.8720580935478 MULTI CID FTMS 0 0 0 18414 88365.84375 0.9572279894301332 1 -0.0543746948242187 2 Unmodified _ALATRRSQALK_ nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758|PTBP3 19.361941925380144 0.6323962752489956 4 [VG]VTD{I|L}{I|L}TVGK{I|L} 12 -1 + 96.195 0.0 0.0 7.9256 7.9256 80.052 0.0 0.0 0.0 22.76420984328891 1.131134461430534 1.131134461430534 1.131134461430534 0 1.048455006504028 2.0 0.3807196863200844 0.0 [VG]VTD{I|L}{I|L}TVGK{I|L};[VG]VTD{I|L}{I|L}TVG{I|L}K;[VG]VTD{I|L}{I|L}TVAKV;R[WE]{I|L}{I|L}[RK]T{I|L} 7.9256;7.8324;6.9838;2.3047 -;-;-;- 1258 + 1 1.474 86058.6 0.4399999976158142 13308 5106 18414 HBL1_DMSO_200M_050219_2,18416 HBL1_DMSO_200M_050219_2,18416,ALATRRSQALK False False GVVTDLITVGLK 98.815782 607.872058093548 915380.1875 18414.0 nc|ENSG00000119314|O95758-5|PTBP3;;nc|ENSG00000119314|O95758|PTBP3 8.441134770711264 2.0 False 12.0 True nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 18417 98.825 519.0 171690.0 25 0 21984.0 + 24494 MIIENFEAL 9 128 540.2755197611406 1078.536486589081 2 540.2757446169853 MULTI CID FTMS 0 0 0 18414 123748.5390625 0.3821400723951684 -2 0.0583648681640625 3 Unmodified _MIIENFEAL_ ENSG00000139746|ENST00000438737|RBM26;ENST00000472143.2_1_13:79951480-79979915:-|nuORF;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26;nc|ENSG00000139746|Q5T8P6-6|RBM26 34.10243960390752 0.1078313939113124 4 {[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}P{M(Oxidation (M))|F} 6 5 29.078 0.0 0.0 2.6961 0.0 0.0 0.0 328.1500726309173 328.1500726309173 10.890625187447965 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}N{M(Oxidation (M))|F}P{M(Oxidation (M))|F} 2.6961 - 565 1 1.474 73973.5 1.0 13309 5106 18414 HBL1_DMSO_200M_050219_2,18417 HBL1_DMSO_200M_050219_2,18417,MIIENFEAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18418 98.838 736.0 155460.0 25 0 20265.0 20322 LLESYIECTM 10 134 601.2772920853854 1200.5400312375707 2 601.2777587771416 MULTI CID FTMS 0 0 0 18414 102717.390625 0.0328910204704733 36 -1.7295150756835938 4 Unmodified _LLESYIECTM_ ENSG00000186141|ENST00000334163|POLR3C 25.399314129420983 0.3980215340001851 4 {I|L}E{I|L}EY 5 6 28.716 0.0 0.0 2.392 0.0 0.0 331.2106217116324 218.9910067193969 550.2016284310293 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0044321917401078 0.0 {I|L}E{I|L}EY 2.392 - 574 + 1 1.474 84203.0 1.0 13310 5106 18414 HBL1_DMSO_200M_050219_2,18418 HBL1_DMSO_200M_050219_2,18418,LLESYIECTM False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18419 98.852 800.0 136060.0 25 0 10347.0 + 17114 KLFPGFEIETV 11 127 640.3502948618171 1278.6860367904342 2 640.3515502810478 MULTI CID FTMS 0 0 0 18414 88334.109375 0.5075398178097689 -3 0.094940185546875 5 Unmodified _KLFPGFEIETV_ ENSG00000070669|ENST00000394308|ASNS;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS 90.13494162714682 0.0006528918523104 4 {[VA]|[{I|L}G]}ME{I|L}{M(Oxidation (M))|F}K{I|L}ETV 11 5 + 86.743 0.0 0.0 6.7838 6.7838 79.094 0.0 0.0 0.0 2.20949674347574 15.070623213458006 2.20949674347574 2.20949674347574 0 0.5 0.8538719643217619 2.288106835214472 0.3807196863200844 {[VA]|[{I|L}G]}ME{I|L}{M(Oxidation (M))|F}K{I|L}ETV;[DP]{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;{NN|[MP]|[D{I|L}]|[EV]}PA{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;{[VA]|[{I|L}G]}ME{M(Oxidation (M))|F}{I|L}K{I|L}ETV;[PG]{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}K{I|L}ETV;{[QN]|[E{I|L}]|[KN]}S{I|L}{M(Oxidation (M))|F}TK{I|L}ETV;{[QN]|[E{I|L}]|[KN]}[PG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;{[QN]|[E{I|L}]|[KN]}S[{M(Oxidation (M))|F}T]{I|L}K{I|L}ETV;{NN|[MP]|[D{I|L}]|[EV]}T{I|L}{M(Oxidation (M))|F}TK{I|L}ETV;[PG]{M(Oxidation (M))|F}E{M(Oxidation (M))|F}{I|L}K{I|L}ETV 6.7838;6.611;6.5059;6.4107;6.2695;6.257;6.0525;6.0081;5.9123;5.8964 -;-;-;-;-;-;-;-;-;- 5268 1 1.474 89630.5 0.4300000071525574 13311 5106 18414 HBL1_DMSO_200M_050219_2,18419 HBL1_DMSO_200M_050219_2,18419,KLFPGFEIETV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18421 98.856 30.0 3079500.0 25 0 264370.0 -1 0 84 688.0731739034812 2748.2635897475247 4 688.3256103396416 MULTI CID FTMS 0 0 0 18420 2744744.25 0.8438295631337862 2 -0.1296768188476562 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 71.475 0.0 0.0 2.6007 0.0 0.0 0.0 1707.6510158551998 1707.6510158551998 26.1908082757248 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.9386218330464624 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.6007 - 1451 1 1.478 75117.8 1.0 13312 5107 18420 HBL1_DMSO_200M_050219_2,18421 HBL1_DMSO_200M_050219_2,18421, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18422 98.859 156.0 462070.0 25 0 42412.0 + 35132 SQYPFPVTL 9 102 526.276598494415 1050.53864405563 2 526.2770263552666 MULTI CID FTMS 0 0 0 18420 311647.84375 0.3736251866958721 11 -0.6569671630859375 2 Unmodified _SQYPFPVTL_ ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-2|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L 45.739877483867886 0.0497104363764649 4 {[QS]|[NT]}YP{M(Oxidation (M))|F}PVT{I|L} 9 0 + 52.304 0.0 0.0 4.9788 4.9788 83.235 0.0 0.0 0.0 9.431382678950236 24.55647007285016 9.431382678950236 11.9181547698838 0 1.5317183090963749 0.0 0.0 0.5102396519197265 + + {[QS]|[NT]}YP{M(Oxidation (M))|F}PVT{I|L};{[QS]|[NT]}PY{M(Oxidation (M))|F}PVT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{[QS]|[NT]}PVT{I|L};[{I|L}T][{I|L}T][C(Carbamidomethyl (C))M]VT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PVY{[QS]|[NT]}T{I|L};{[QS]|[NT]}YPK{[QS]|[NT]}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QS]|[NT]}{M(Oxidation (M))|F}PVT{I|L};{[QS]|[NT]}YPV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{[QS]|[NT]}PVT{I|L};[VP]T[YN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L} 4.9788;3.8443;3.5042;3.0232;2.738;2.503;2.4769;2.4108;2.202;2.1789 +;-;-;-;-;-;-;-;-;- + 371 1 1.478 63733.4 1.0 13313 5107 18420 HBL1_DMSO_200M_050219_2,18422 HBL1_DMSO_200M_050219_2,18422,SQYPFPVTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18423 98.863 186.0 388290.0 25 0 64204.0 + 6544 EALHYMLLV 9 100 544.7940913414388 1087.5736297496776 2 544.7942382693291 MULTI CID FTMS 0 0 0 18420 252964.09375 0.6437880822174267 3 -0.2317428588867187 3 Unmodified _EALHYMLLV_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF 44.40701690623563 0.0526327925666318 4 [H{I|L}]{[CP]|[EA]}YM{I|L}{I|L}V 9 4 + 58.835 0.0 0.0 5.4097 5.4097 74.121 0.0 0.0 0.0 10.330145895351848 29.813988520656807 10.330145895351848 2.4865124202832334 0 0.8182503180159344 1.0969100130080565 1.6549471895720984 0.0 [H{I|L}]{[CP]|[EA]}YM{I|L}{I|L}V;[H{I|L}]YAEM{I|L}{I|L}V;{[WN]|[YH]}{I|L}AEM{I|L}{I|L}V;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}H]|[RQ]}EM{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}[HA]YM{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}EM{I|L}{I|L}V;[H{I|L}]YAT[NS]A{I|L}V;[H{I|L}][TA]Y[NS]A{I|L}V;{[WN]|[YH]}{I|L}AT[NS]A{I|L}V;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}H]|[RQ]}T[NS]A{I|L}V 5.4097;5.1811;3.8957;3.8908;3.7585;2.7252;2.5611;1.8456;1.2757;1.2707 -;-;-;-;-;-;-;-;-;- 579 1 1.478 65901.8 1.0 13314 5107 18420 HBL1_DMSO_200M_050219_2,18423 HBL1_DMSO_200M_050219_2,18423,EALHYMLLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18424 98.866 173.0 366310.0 25 0 49843.0 + 41436 VPLIIVNSI 9 94 484.3126934546355 966.610833976071 2 484.3133422732353 MULTI CID FTMS 0 0 0 18420 216321.828125 0.3156232277735734 -2 0.0835800170898437 4 Unmodified _VPLIIVNSI_ ENSG00000134049|ENST00000256433|IER3IP1 49.66892048692302 0.0410958345688192 4 [{I|L}P]{I|L}{I|L}VVNS{I|L} 9 2 + 47.514 0.0 0.0 4.9155 4.9155 73.075 0.0 0.0 0.0 7.876965682898735 10.330145895351848 7.876965682898735 3.0102999566398125 0 0.8182503180159344 1.0 0.0 0.0 [{I|L}P]{I|L}{I|L}VVNS{I|L};[{I|L}P]{I|L}V{I|L}VNS{I|L};[{I|L}P]{I|L}{I|L}VNVS{I|L};[{I|L}P]V{I|L}{I|L}VNS{I|L};[{I|L}P]{I|L}V{I|L}NVS{I|L};{I|L}{I|L}P{I|L}VVNS{I|L};[VP]{I|L}{I|L}{I|L}VNS{I|L};[{I|L}P]{I|L}{I|L}VVGGS{I|L};[{I|L}P]V{I|L}{I|L}NVS{I|L};{I|L}{I|L}PV{I|L}VNS{I|L} 4.9155;4.6041;4.5348;4.2927;4.2234;4.1006;4.0815;3.9629;3.912;3.7892 -;-;-;-;-;-;+;-;-;- + 491 1 1.478 53907.5 1.0 13315 5107 18420 HBL1_DMSO_200M_050219_2,18424 HBL1_DMSO_200M_050219_2,18424,VPLIIVNSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18425 98.88 800.0 182370.0 25 0 19962.0 + 17213 KLLEVQILEV 10 126 592.3682536063708 1182.7219542795417 2 592.3689453005791 MULTI CID FTMS 0 0 0 18420 170797.25 0.4602452704860273 4 -0.3289642333984375 5 Unmodified _KLLEVQILEV_ ENSG00000135968|ENST00000309863|GCC2 90.13494162714682 0.0093239051209448 4 {I|L}{I|L}KEVQ{I|L}{I|L}EV 10 2 + 98.299 0.0 0.0 8.3113 8.3113 83.374 0.0 0.0 0.0 2.518119729937993 16.53212513775344 2.518119729937993 2.518119729937993 0 1.079689690656103 1.154901959985743 1.4291746928241125 1.1307196863200843 {I|L}{I|L}KEVQ{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]VQ{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}N{I|L}{I|L}K{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}V{I|L}KQ{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}VQ{I|L}K{I|L}{I|L}EV;{I|L}{I|L}KE{I|L}N{I|L}{I|L}EV;{I|L}{I|L}KEV[AG]{I|L}{I|L}EV;{I|L}{I|L}NE{I|L}K{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]{I|L}N{I|L}{I|L}EV;{I|L}{I|L}D{I|L}KQ{I|L}{I|L}EV 8.3113;8.0984;8.013;7.9668;7.6194;7.5789;7.5364;7.5195;7.366;7.3579 -;-;-;-;-;-;-;-;-;- 2651 1 1.478 110435.8 0.6200000047683716 13316 5107 18420 HBL1_DMSO_200M_050219_2,18425 HBL1_DMSO_200M_050219_2,18425,KLLEVQILEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18426 98.887 382.0 360600.0 25 0 45394.0 + 22770 LQQELLINI 9 152 542.3245874437387 1082.6346219542772 2 542.3251830935478 MULTI CID FTMS 0 0 0 18420 156413.125 0.5997364630571986 -2 0.0835800170898437 6 Unmodified _LQQELLINI_ ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF 85.27202061508552 0.0162393975915471 4 {[QN]|[E{I|L}]|[KN]}QQ{I|L}{I|L} 6 5 53.617 0.0 0.0 4.9525 0.0 0.0 0.0 355.197279995546 355.197279995546 21.555868335891 0.0 0.0 0.0 0 0.2614393726401688 1.0969100130080565 1.328542181343484 1.5189301784845295 {[QN]|[E{I|L}]|[KN]}QQ{I|L}{I|L} 4.9525 - 2413 1 1.478 107488.3 1.0 13317 5107 18420 HBL1_DMSO_200M_050219_2,18426 HBL1_DMSO_200M_050219_2,18426,LQQELLINI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18427 98.901 800.0 137350.0 25 0 6229.9 -1 0 114 799.6371628053679 3194.5195453550714 4 799.8895141482353 MULTI CID FTMS 0 0 0 18420 131587.1875 0.2625192254579664 11 -0.6569671630859375 7 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 66.041 0.0 0.0 2.0673 0.0 0.0 0.0 2153.9091687283712 2153.9091687283712 50.607887415777526 0.0 0.0 0.0 0 2.0 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.0673 - 401 1 1.478 80401.9 0.5299999713897705 13318 5107 18420 HBL1_DMSO_200M_050219_2,18427 HBL1_DMSO_200M_050219_2,18427, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18428 98.908 391.0 137570.0 25 0 13430.0 + 19997 LILEPSLYTV 10 94 574.3337868670977 1146.6530208009954 2 574.3348266482353 MULTI CID FTMS 0 0 0 18420 125793.9609375 0.5807182434218665 4 -0.3289642333984375 8 Unmodified _LILEPSLYTV_ ENSG00000111481|ENST00000262061|COPZ1;ENST00000551412.5_1_12:54718935-54741629:+|nuORF;ENST00000553009.5_1_12:54718935-54736154:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1 39.957323273325 0.1580177220464651 4 {[TV]|[{I|L}S]}PY{I|L}S 6 7 32.452 0.0 0.0 2.8301 0.0 0.0 0.0 483.2808203534863 483.2808203534863 2.0458319767804767 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.4247425010840047 0.0 {[TV]|[{I|L}S]}PY{I|L}S 2.8301 - 390 1 1.478 46395.4 1.0 13319 5107 18420 HBL1_DMSO_200M_050219_2,18428 HBL1_DMSO_200M_050219_2,18428,LILEPSLYTV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18429 98.922 800.0 143440.0 25 0 9477.6 -1 0 123 751.0350057880768 2250.08318796443 3 751.7049438357353 MULTI CID FTMS 0 0 0 18420 97035.5546875 0.6792618949231746 -2 0.0835800170898437 9 4 {[TV]|[{I|L}S]}N{I|L}PC(Carbamidomethyl (C))G{I|L}{I|L}{I|L}NC(Carbamidomethyl (C))C(Carbamidomethyl (C)){M(Oxidation (M))|F} 14 -1 60.42 0.0 0.0 2.6853 0.0 0.0 0.0 585.2755861462045 585.2755861462045 40.99107903826933 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.3054621874040891 0.0 {[TV]|[{I|L}S]}N{I|L}PC(Carbamidomethyl (C))G{I|L}{I|L}{I|L}NC(Carbamidomethyl (C))C(Carbamidomethyl (C)){M(Oxidation (M))|F} 2.6853 - 2209 1 1.478 89320.5 0.4600000083446502 13320 5107 18420 HBL1_DMSO_200M_050219_2,18429 HBL1_DMSO_200M_050219_2,18429, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18431 98.927 106.0 566640.0 25 0 50915.0 + 30897 RIPPWMEVV 9 89 563.8072210057469 1125.5998890782937 2 563.8076660037041 MULTI CID FTMS 0 0 0 18430 407089.15625 0.7551450379449157 1 -0.0593795776367187 1 Unmodified _RIPPWMEVV_ ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-4|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B 29.081581746732265 0.1611639662936252 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[YV]QEVV 9 6 + 49.587 0.0 0.0 4.4054 4.4054 79.157 0.0 0.0 0.0 12.164537177296497 26.11941264025134 12.164537177296497 9.208187539523747 0 0.8494850021680094 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[YV]QEVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[YV][AG]EVV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R{[{M(Oxidation (M))|F}C]|[YS]}[R{I|L}]VV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WP]P[R{I|L}]VV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[K{I|L}]{[{M(Oxidation (M))|F}C]|[YS]}RC{I|L} 4.4054;3.5873;3.3606;1.8512;0.003317 -;-;-;-;- 164 1 1.478 53400.6 1.0 13321 5108 18430 HBL1_DMSO_200M_050219_2,18431 HBL1_DMSO_200M_050219_2,18431,RIPPWMEVV False True RIPPWMEVV 98.926632 563.807666003704 11253892.0 18430.0 nc|ENSG00000125630|Q9H9Y6-5|POLR1B;;ENSG00000125630|ENST00000263331|POLR1B;;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;;nc|ENSG00000125630|Q9H9Y6-4|POLR1B 7.226088682810466 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18432 98.929 115.0 657860.0 25 0 100460.0 + 34738 SPYPWPLNHI 10 65 612.3143340079008 1222.6141150826015 2 612.3143188357353 MULTI CID FTMS 0 0 0 18430 368038.40625 0.8982965342994709 3 -0.2586669921875 2 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 56.17704186161178 0.0466144807663799 4 [PS]YPW{I|L}PV[HQ] 10 4 + 71.119 0.0 0.0 5.817 5.817 73.207 0.0 0.0 0.0 13.251349721325951 1.0720996964786875 1.0720996964786875 1.0720996964786875 0 1.274227503252014 1.5228787452803376 0.0 0.7742275032520141 [PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PNH{I|L};[PS]YPW{I|L}PGGH{I|L};[PS]Y{I|L}[WP]PV[HQ];[PS]Y{I|L}[WP]PNH{I|L};[PS]Y{I|L}[WP]PGGH{I|L} 5.817;5.7293;4.3465;3.8138;3.7261;2.6292 -;-;-;-;-;- 165 + 1 1.478 60823.6 1.0 13322 5108 18430 HBL1_DMSO_200M_050219_2,18432 HBL1_DMSO_200M_050219_2,18432,SPYPWPLNHI True True SPYPWPLNHI 98.929052 612.314318835735 45753024.0 18430.0 nc|ENSG00000128654|O75431-2|MTX2;;ENSG00000128654|ENST00000249442|MTX2;;ENST00000420864.5_1_2:177135134-177202389:+|nuORF 8.75662612915039 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18433 98.932 118.0 491580.0 25 0 72583.0 + 19993 LILEGNDIELV 11 80 614.3452545258865 1226.675956118573 2 614.3455078005791 MULTI CID FTMS 0 0 0 18430 410214.28125 0.9991510130414718 -1 0.0702972412109375 3 Unmodified _LILEGNDIELV_ ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENST00000475906.1_1_14:35732014-35732239:+|nuORF;ENST00000511643.5_1_4:39456165-39456631:-|nuORF 45.69961567697781 0.1414455360291008 4 {[QN]|[E{I|L}]|[KN]}G[DN]{I|L}{I|L}{I|L}E{I|L}V 11 4 + 68.554 0.0 0.0 5.5886 5.5886 75.193 0.0 0.0 0.0 3.4235529448454827 10.550088832413536 3.4235529448454827 2.697953115119077 0 0.8182503180159344 1.2218487496163564 0.6861818737241735 1.885151878060192 {[QN]|[E{I|L}]|[KN]}G[DN]{I|L}{I|L}{I|L}E{I|L}V;{[QN]|[E{I|L}]|[KN]}G[DN]{I|L}{I|L}E{I|L}{I|L}V;[NG]DE{I|L}{I|L}{I|L}{I|L}E{I|L}V;{I|L}{I|L}E[NG]D{I|L}{I|L}E{I|L}V;[NG]DE{I|L}{I|L}{I|L}E{I|L}{I|L}V;{I|L}{I|L}E[NG]D{I|L}E{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}G[DN]{I|L}E{I|L}{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}{I|L}[NG]D{I|L}{I|L}E{I|L}V;[NG]DE{I|L}{I|L}E{I|L}{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}G[DN]E{I|L}{I|L}{I|L}{I|L}V 5.5886;5.3686;5.3095;5.2028;5.0895;4.9829;4.9183;4.712;4.6392;4.608 -;-;-;-;-;-;-;-;-;- 526 1 1.478 48626.4 1.0 13323 5108 18430 HBL1_DMSO_200M_050219_2,18433 HBL1_DMSO_200M_050219_2,18433,LILEGNDIELV False True LILEGNDIELV 98.931521 614.345507800579 3436161.5 18430.0 ENSG00000163682|ENST00000295955|RPL9;;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;;ENST00000475906.1_1_14:35732014-35732239:+|nuORF;;ENST00000511643.5_1_4:39456165-39456631:-|nuORF 4.412189881006877 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18434 98.936 269.0 329480.0 25 0 45419.0 + 20626 LLPPPPLLA 9 86 465.8047078018629 929.5948626705258 2 465.8051025271416 MULTI CID FTMS 0 0 0 18430 353124.09375 0.2779906831060446 23 -1.0322189331054688 4 Unmodified _LLPPPPLLA_ ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2 56.04830969593885 0.0282699710924866 4 {I|L}{I|L}PPPP{I|L}A{I|L} 9 2 + 54.931 0.0 0.0 5.9092 5.9092 88.856 0.0 0.0 0.0 27.76425394070891 12.161947364299728 12.161947364299728 19.69273760456403 0 1.3539171939081172 2.0 0.0 0.0 {I|L}{I|L}PPPP{I|L}A{I|L};{I|L}{I|L}[YK]P{I|L}A{I|L} 5.9092;3.7907 -;- 318 + 1 1.478 73394.8 1.0 13324 5108 18430 HBL1_DMSO_200M_050219_2,18434 HBL1_DMSO_200M_050219_2,18434,LLPPPPLLA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18435 98.944 427.0 259730.0 25 0 28651.0 + 3027 AVLDLSWNKL 10 126 579.8289128859975 1157.643272838795 2 579.8294555544853 MULTI CID FTMS 0 0 0 18430 202056.5 0.5909417438069916 3 -0.2586669921875 5 Unmodified _AVLDLSWNKL_ ENSG00000136045|ENST00000412830|PWP1 103.35351024395868 0.0068982832659769 4 {[VA]|[{I|L}G]}{I|L}D{I|L}SWNK{I|L} 10 0 + 109.97 0.0 0.0 9.4996 9.4996 92.807 0.0 0.0 0.0 67.75098137396776 11.32516171196231 11.32516171196231 9.164539485499247 0 1.1989700043360187 2.0 0.6747425010840047 1.7491348669726232 + + {[VA]|[{I|L}G]}{I|L}D{I|L}SWNK{I|L};{[VA]|[{I|L}G]}{I|L}D{I|L}SWGGK{I|L};{[VA]|[{I|L}G]}{I|L}D{I|L}[TP]{M(Oxidation (M))|F}AV{I|L};{[VA]|[{I|L}G]}CN{I|L}KV{M(Oxidation (M))|F}[HK];{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}ED[RP]V{I|L};{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}V{[RE]|[WV]}[DP]{I|L};{[VA]|[{I|L}G]}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}KV{M(Oxidation (M))|F}[HK];{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}{I|L}EE[QP]{I|L};{[VA]|[{I|L}G]}GC(Carbamidomethyl (C)){I|L}KV{M(Oxidation (M))|F}[HK];{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}V{[RE]|[WV]}E[VP] 9.4996;8.7079;4.3986;4.0704;3.342;3.266;3.1889;3.13;3.0997;3.0234 +;-;-;-;-;-;-;-;-;- + 2277 + 1 1.478 88585.0 1.0 13325 5108 18430 HBL1_DMSO_200M_050219_2,18435 HBL1_DMSO_200M_050219_2,18435,AVLDLSWNKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18436 98.958 800.0 170950.0 25 0 21172.0 + 45521 YTTDFIYQL 9 157 582.2844411619603 1162.5543293907206 2 582.2848388552666 MULTI CID FTMS 0 0 0 18430 117544.765625 0.8409471360837407 -1 0.0702972412109375 6 Unmodified _YTTDFIYQL_ ENSG00000067057|ENST00000381125|PFKP;nc|ENSG00000067057|Q01813-2|PFKP 67.34385681178166 0.0221257235307089 4 {I|L}YTEC{I|L} 6 7 36.252 0.0 0.0 3.1183 0.0 0.0 422.21465938871785 0.0 422.21465938871785 0.0 16.66045873973544 0.0 0.0 0 0.4247425010840047 0.0 1.4916440611282626 0.0 {I|L}YTEC{I|L} 3.1183 - 1491 + 1 1.478 105382.0 0.5 13326 5108 18430 HBL1_DMSO_200M_050219_2,18436 HBL1_DMSO_200M_050219_2,18436,YTTDFIYQL True True YTTDFIYQL 98.957944 582.284838855267 1313191.0 18430.0 nc|ENSG00000067057|Q01813-2|PFKP;;ENSG00000067057|ENST00000381125|PFKP 5.819811979929606 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18437 98.969 649.0 159240.0 25 0 7226.5 + -1 QPFTTIPFPPPPQN 14 96 791.3727088192045 2371.096297057813 3 791.7080566287041 MULTI CID FTMS 0 0 0 18430 118897.703125 0.2447047991957927 46 -1.842010498046875 7 nc|ENSG00000100320|O43251-4|RBFOX2;nc|ENSG00000100320|O43251-8|RBFOX2;nc|ENSG00000100320|O43251-5|RBFOX2;nc|ENSG00000100320|O43251-3|RBFOX2;nc|ENSG00000100320|O43251-6|RBFOX2;nc|ENSG00000100320|O43251|RBFOX2;nc|ENSG00000100320|O43251-7|RBFOX2;nc|ENSG00000100320|O43251-2|RBFOX2;nc|ENSG00000100320|O43251-10|RBFOX2;ENST00000491982.1_1_22:36174014-36236265:-|nuORF;nc|ENSG00000100320|O43251-9|RBFOX2;ENSG00000100320|ENST00000695854|RBFOX2 4 [YK]APPPP 7 -1 28.716 0.0 0.0 1.2111 0.0 0.0 0.0 1617.6668859896774 1617.6668859896774 -5.377431649741055 0.0 -5.377431649741055 0.0 0 0.0 1.0 0.0 0.0 [YK]APPPP 1.2111 - 6124 1 1.478 81060.4 1.0 13327 5108 18430 HBL1_DMSO_200M_050219_2,18437 HBL1_DMSO_200M_050219_2,18437, False False QPFTTIPFPPPPQN 98.969273 791.3741 47174.9609375 18430.0 nc|ENSG00000100320|O43251-4|RBFOX2;;nc|ENSG00000100320|O43251-8|RBFOX2;;nc|ENSG00000100320|O43251-5|RBFOX2;;nc|ENSG00000100320|O43251-3|RBFOX2;;nc|ENSG00000100320|O43251-6|RBFOX2;;nc|ENSG00000100320|O43251|RBFOX2;;nc|ENSG00000100320|O43251-7|RBFOX2;;nc|ENSG00000100320|O43251-2|RBFOX2;;nc|ENSG00000100320|O43251-10|RBFOX2;;ENST00000491982.1_1_22:36174014-36236265:-|nuORF;;nc|ENSG00000100320|O43251-9|RBFOX2;;ENSG00000100320|ENST00000695854|RBFOX2 1.2414014140764873 2.0 False 14.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18438 98.981 686.0 144040.0 25 0 5916.4 + 39906 IPFSVVGSNQLI 12 115 637.3609326081435 1272.7073122830868 2 637.3610717654228 MULTI CID FTMS 0 0 0 18430 114263.8359375 0.8342600118758139 -1 0.0702972412109375 8 Unmodified _VFPSLNNKELI_ nc|ENSG00000168385|Q15019-2|SEPTIN2;ENSG00000168385|ENST00000391971|SEPTIN2;ENST00000481500.1_1_2:242277175-242285749:+|nuORF;nc|ENSG00000168385|Q15019-3|SEPTIN2 29.081581746732265 0.4093582134107448 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV{I|L}VGSNQ{I|L}{I|L} 12 7 + 89.818 0.0 0.0 7.0572 7.0572 83.618 0.0 0.0 0.0 6.475771636820113 11.382353118286233 6.475771636820113 4.203103093438955 0 0.8935078169319297 0.958607314841775 2.447621246364342 0.4247425010840047 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV{I|L}VGSNQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SVV{I|L}GSNQ{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}SVVGSNQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{I|L}VVGSNQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV{I|L}VGSN[AG]{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV{I|L}VGSGGQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}SVVGSNQ{I|L}{I|L};[{I|L}P][YG]{I|L}VGSNQ{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SVV{I|L}GSN[AG]{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SVV{I|L}GSGGQ{I|L}{I|L} 7.0572;6.727;6.5484;6.3932;6.3424;6.3424;6.1812;6.0414;6.0121;6.0121 -;-;-;-;-;-;-;-;-;- 7152 1 1.478 85580.5 1.0 13328 5108 18430 HBL1_DMSO_200M_050219_2,18438 HBL1_DMSO_200M_050219_2,18438,VFPSLNNKELI False False IPFSVVGSNQLI 98.981204 637.361071765423 1725487.5 18430.0 nc|ENSG00000168385|Q15019-2|SEPTIN2;;ENSG00000168385|ENST00000391971|SEPTIN2;;ENST00000481500.1_1_2:242277175-242285749:+|nuORF;;nc|ENSG00000168385|Q15019-3|SEPTIN2 3.8793094952901206 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18440 98.986 28.0 2831400.0 25 0 676760.0 + 35878 SVLNVLHSL 9 73 491.2902326688864 980.5659124045728 2 491.2902404665947 MULTI CID FTMS 0 0 0 18439 2280722.75 1.0 0 0.0 1 Unmodified _SVLNVLHSL_ ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L 65.23502041540118 0.0231836506122253 4 [VS]{I|L}NV{I|L}HS{I|L} 9 0 + 80.684 0.0 0.0 8.2283 8.2283 92.24 0.0 0.0 0.0 33.46114929231213 18.582268588648247 18.582268588648247 9.208187539523747 0 0.7742275032520141 2.0 1.610924374808178 0.0 + + [VS]{I|L}NV{I|L}HS{I|L};[VS]{I|L}GGV{I|L}HS{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VN{I|L}[PA];[VS]{I|L}HN{I|L}{I|L}[VS];{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}QN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{I|L}VN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VGG{I|L}[PA];[VS]{I|L}HGG{I|L}{I|L}[VS];{[QV]|[N{I|L}]|[RA]|[KV]}VAAVN{I|L}[PA];[H{I|L}]VN{I|L}S{I|L}[VS] 8.2283;7.2893;5.641;5.5006;4.7201;4.702;4.702;4.5615;4.395;3.9955 +;-;-;-;-;-;-;-;-;- + 821 + 1 1.478 65118.1 1.0 13329 5109 18439 HBL1_DMSO_200M_050219_2,18440 HBL1_DMSO_200M_050219_2,18440,SVLNVLHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18441 98.987 55.0 1148800.0 25 0 173280.0 + 15301 IPISNILMV 9 79 508.296204632002 1014.577856330804 2 508.2966491580009 MULTI CID FTMS 0 0 0 18439 1086271.75 1.0 0 0.0 2 Oxidation (M) _IPISNILM(Oxidation (M))V_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 74.42276476219924 0.019389277360085 4 [{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V 9 2 + 70.473 0.0 0.0 6.946 6.946 81.214 0.0 0.0 0.0 3.187587626244124 3.480137174129325 3.187587626244124 3.0102999566398125 0 0.7742275032520141 1.5228787452803376 0.6109243748081782 1.1549471895720984 [{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]{I|L}SN{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]S{I|L}N{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}N{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}NP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}{I|L}NP{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}PN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[NS]{I|L}{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}P{I|L}N{I|L}{I|L}{M(Oxidation (M))|F}V;[NS]{I|L}P{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V 6.946;6.6493;6.6493;6.6318;6.3351;5.7989;5.7417;5.5339;5.445;5.2372 -;+;-;-;-;-;-;-;-;- + 667 1 1.478 55299.4 1.0 13330 5109 18439 HBL1_DMSO_200M_050219_2,18441 HBL1_DMSO_200M_050219_2,18441,IPISNILMV True False IPISNILMV 98.987394 508.296649158001 26576912.0 18439.0 ENSG00000137959|ENST00000370751|IFI44L;;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 5.142444769541423 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18442 98.989 55.0 1353000.0 25 0 343010.0 + 31502 RQFDVDILI 9 57 559.8135369572796 1117.612520981359 2 559.8140746951103 MULTI CID FTMS 0 0 0 18439 908233.3125 1.0 0 0.0 3 Unmodified _RQFDVDILI_ ENSG00000111237|ENST00000549578|VPS29;ENST00000548259.1_1_12:110930799-110939856:-|nuORF;nc|ENSG00000111237|Q9UBQ0-2|VPS29 24.99096001346401 0.2132109383330889 4 DVD{I|L}{I|L}{I|L} 6 3 53.404 0.0 0.0 4.7784 0.0 0.0 431.2273731916032 0.0 431.2273731916032 0.0 46.41441272380455 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + DVD{I|L}{I|L}{I|L} 4.7784 + + 42 1 1.478 63717.8 1.0 13331 5109 18439 HBL1_DMSO_200M_050219_2,18442 HBL1_DMSO_200M_050219_2,18442,RQFDVDILI False True RQFDVDILI 98.988802 559.81407469511 15648888.0 18439.0 ENST00000548259.1_1_12:110930799-110939856:-|nuORF;;nc|ENSG00000111237|Q9UBQ0-2|VPS29;;ENSG00000111237|ENST00000549578|VPS29 5.761453946431478 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18443 98.991 108.0 1107400.0 25 0 146470.0 + + 37627 KMPEVIPIL 9 128 520.3468179071958 1038.6790828811916 2 520.3478271365166 MULTI CID FTMS 0 0 0 18439 274457.4375 0.5778702560360914 -1 0.0593795776367187 4 Unmodified _TLLLRTPLL_ nc|ENSG00000143740|Q5SQN1-3|SNAP47;nc|ENSG00000143740|Q5SQN1|SNAP47;ENSG00000143740|ENST00000617596|SNAP47;nc|ENSG00000143740|Q5SQN1-4|SNAP47;nc|ENSG00000143740|Q5SQN1-2|SNAP47 56.17704186161178 0.0281986971544335 4 [{I|L}T]{I|L}R[{I|L}P]{I|L}T{I|L} 9 -1 + 46.454 0.0 0.0 4.4724 4.4724 69.659 0.0 0.0 0.0 2.04628427264403 16.478174818886373 2.04628427264403 2.04628427264403 0 1.035666875892183 1.6989700043360187 0.4247425010840047 0.0 [{I|L}T]{I|L}R[{I|L}P]{I|L}T{I|L};{I|L}{I|L}TR[{I|L}P]{I|L}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KK[{I|L}P]{I|L}T{I|L} 4.4724;4.2754;1.8875 -;-;- 612 1 1.478 96189.4 1.0 13332 5109 18439 HBL1_DMSO_200M_050219_2,18443 HBL1_DMSO_200M_050219_2,18443,TLLLRTPLL False False KMPEVIPIL 98.991092 520.347827136517 3937036.0 18439.0 nc|ENSG00000143740|Q5SQN1-3|SNAP47;;nc|ENSG00000143740|Q5SQN1|SNAP47;;ENSG00000143740|ENST00000617596|SNAP47;;nc|ENSG00000143740|Q5SQN1-4|SNAP47;;nc|ENSG00000143740|Q5SQN1-2|SNAP47 0.1243468920389811 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18444 98.995 182.0 398060.0 25 0 58864.0 + 4035 DALRSILTI 9 94 501.3032265673282 1000.5919002014564 2 501.3034240603447 MULTI CID FTMS 0 0 0 18439 275747.75 0.0025632778298669 40 -1.695953369140625 5 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 57.72198328787511 0.0273433238377839 4 [{I|L}T]R[DG]{I|L}{I|L}T{I|L} 9 4 + 67.84 0.0 0.0 6.78 6.78 80.656 0.0 0.0 0.0 3.0102999566398125 16.478174818886373 3.0102999566398125 3.0102999566398125 0 0.9247425010840048 1.5228787452803376 0.75 0.0 [{I|L}T]R[DG]{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}K[DG]{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}K{[RE]|[WV]}{I|L}T{I|L};[{I|L}T][VG]{[RE]|[WV]}{I|L}T{I|L};[VS][{I|L}A]{[RE]|[WV]}{I|L}T{I|L};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}{[RE]|[WV]}{I|L}T{I|L};[{I|L}A][VS]{[RE]|[WV]}{I|L}T{I|L};[{I|L}V]{[SA]|[TG]}{[RE]|[WV]}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}[KS]GE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}W[KS]{I|L} 6.78;6.4791;5.8317;5.2069;4.3421;4.0035;3.9176;3.8786;3.5921;3.282 -;-;-;-;-;-;-;-;-;- 427 1 1.478 62397.8 1.0 13333 5109 18439 HBL1_DMSO_200M_050219_2,18444 HBL1_DMSO_200M_050219_2,18444,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18445 98.999 248.0 297080.0 25 0 32722.0 + 3380 AYQLMTDVF 9 102 544.2600244727055 1086.5054960122109 2 544.2603637576103 MULTI CID FTMS 0 0 0 18439 203258.40625 1.0 0 0.0 6 Unmodified _AYQLMTDVF_ ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2;nc|ENSG00000055917|Q8TB72|PUM2 23.1484247019978 0.2366544122328345 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA{I|L}M 6 6 34.614 0.0 0.0 3.1858 0.0 0.0 0.0 477.19876928785465 477.19876928785465 1.8892461925388204 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA{I|L}M 3.1858 - 385 1 1.478 63235.6 1.0 13334 5109 18439 HBL1_DMSO_200M_050219_2,18445 HBL1_DMSO_200M_050219_2,18445,AYQLMTDVF False True AYQLMTDVF 98.99924 544.26036375761 1870071.875 18439.0 nc|ENSG00000055917|Q8TB72|PUM2;;ENSG00000055917|ENST00000361078|PUM2;;nc|ENSG00000055917|Q8TB72-4|PUM2;;nc|ENSG00000055917|Q8TB72-2|PUM2 4.121522585550944 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18446 99.002 159.0 448060.0 25 0 30279.0 + 7801 ELIHLFWI 8 100 535.8057363247569 1069.5969197163138 2 536.3028442263603 MULTI CID FTMS 0 0 0 18439 218099.015625 0.6160366470726608 4 -0.2889785766601562 7 Unmodified _ELIHLFWI_ REV__ENST00000262605.8_1_20:43118476-43118572:+|nuORF 23.1484247019978 0.5573009939494978 4 {[QN]|[E{I|L}]|[KN]}N{I|L}{I|L} 5 -1 18.415 0.0 0.0 1.7217 0.0 0.0 0.0 484.2399610583638 484.2399610583638 1.7600079988297033 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.2614393726401688 {[QN]|[E{I|L}]|[KN]}N{I|L}{I|L} 1.7217 - 527 1 1.478 63705.4 1.0 13335 5109 18439 HBL1_DMSO_200M_050219_2,18446 HBL1_DMSO_200M_050219_2,18446,ELIHLFWI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18447 99.01 427.0 367230.0 25 0 17851.0 + -1 AAADVLEFV 9 110 934.4866706047784 0 934.486376941204 PEAK CID FTMS 0 0 0 18439 196232.671875 1.0 0 0.0 8 ENSG00000129083|ENST00000439561|COPB1 4 V{M(Oxidation (M))|F}E{I|L}VD 6 -1 37.542 0.0 0.0 2.0109 0.0 0.0 951.4954226531128 210.08852564029533 1161.5839482934082 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1791746928241125 0.0 V{M(Oxidation (M))|F}E{I|L}VD 2.0109 - 3711 + 1 1.478 105019.4 1.0 13336 5109 18439 HBL1_DMSO_200M_050219_2,18447 HBL1_DMSO_200M_050219_2,18447, False False AAADVLEFV 99.010015 934.486376941204 1555608.375 18439.0 ENSG00000129083|ENST00000439561|COPB1 5.416065692901611 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18448 99.019 488.0 347020.0 25 0 40954.0 + 35609 STYKFFEVI 9 139 567.2977130476181 1132.580873162036 2 567.2974120974541 MULTI CID FTMS 0 0 0 18439 185066.859375 0.0329559417818342 -4 0.2132568359375 9 Unmodified _STYKFFEVI_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 60.07390631473393 0.0260411565414776 4 {[MG]|[TS]}YK{M(Oxidation (M))|F}{M(Oxidation (M))|F}EV{I|L} 9 0 + 68.427 0.0 0.0 6.0416 6.0416 81.294 0.0 0.0 0.0 5.356668758921828 16.478174818886373 5.356668758921828 5.356668758921828 0 0.9247425010840048 0.0 1.5356668758921828 0.0 + + {[MG]|[TS]}YK{M(Oxidation (M))|F}{M(Oxidation (M))|F}EV{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKYTSV{I|L};[YK]{[MG]|[TS]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}EV{I|L};{[MG]|[TS]}YK{M(Oxidation (M))|F}E{M(Oxidation (M))|F}V{I|L};[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}KYTSV{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}RTG{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{I|L};[YK]{M(Oxidation (M))|F}{[MG]|[TS]}{M(Oxidation (M))|F}EV{I|L};[YK]{[MG]|[TS]}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}V{I|L};{[HG]|PP}P{[MG]|[TS]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}EV{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}KEYTSV{I|L} 6.0416;5.5687;5.5619;5.5539;5.3728;5.2166;5.1407;5.0742;5.0096;4.7261 +;-;-;-;-;-;-;-;-;- + 5438 1 1.478 139618.5 1.0 13337 5109 18439 HBL1_DMSO_200M_050219_2,18448 HBL1_DMSO_200M_050219_2,18448,STYKFFEVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18449 99.026 438.0 187190.0 25 0 21232.0 + 16455 KAIGVGLGFEL 11 115 552.3264984157979 1102.6384438983955 2 552.3282348513603 MULTI CID FTMS 0 0 0 18439 123429.53125 1.0 0 0.0 10 Unmodified _KAIGVGLGFEL_ ENSG00000149313|ENST00000278618|AASDHPPT 22.65808497894818 0.560183898709508 4 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}G{I|L}G{M(Oxidation (M))|F}E{I|L} 10 3 + 57.932 0.0 0.0 5.254 5.254 68.951 0.0 0.0 0.0 0.0873194583742957 16.53212513775344 0.0873194583742957 0.0873194583742957 0 0.6421590589602533 0.5686362358410126 0.5189301784845295 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}G{I|L}G{M(Oxidation (M))|F}E{I|L};[Q{I|L}]VKG{I|L}G{M(Oxidation (M))|F}E{I|L};[Q{I|L}]VKG{I|L}GE{M(Oxidation (M))|F}{I|L};{I|L}{I|L}NKG{I|L}G{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}G{I|L}GE{M(Oxidation (M))|F}{I|L};[{I|L}V]QKG{I|L}G{M(Oxidation (M))|F}E{I|L};[Q{I|L}]VKG{I|L}W{M(Oxidation (M))|F}{I|L};[Q{I|L}][RK]{I|L}G{M(Oxidation (M))|F}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}KG{I|L}G{M(Oxidation (M))|F}E{I|L};{I|L}{I|L}NKG{I|L}GE{M(Oxidation (M))|F}{I|L} 5.254;5.246;4.7359;4.433;4.4269;4.1623;4.1435;3.9925;3.9842;3.9229 -;-;-;-;-;-;-;-;-;- 972 1 1.478 65408.8 1.0 13338 5109 18439 HBL1_DMSO_200M_050219_2,18449 HBL1_DMSO_200M_050219_2,18449,KAIGVGLGFEL False True KAIGVGLGFEL 99.026444 552.32823485136 786707.1875 18439.0 ENSG00000149313|ENST00000278618|AASDHPPT 3.658687432607015 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18450 99.04 800.0 123980.0 25 0 12751.0 -1 0 101 682.6730620320081 2044.9973566962244 3 683.0088378787041 MULTI CID FTMS 0 0 0 18439 122097.0625 0.7285297914358024 -1 0.0593795776367187 11 4 [VP]EM{I|L}{M(Oxidation (M))|F} 6 -1 31.833 0.0 0.0 1.5566 0.0 0.0 0.0 1325.634221574024 1325.634221574024 5.406075122407692 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.0 0.0 [VP]EM{I|L}{M(Oxidation (M))|F} 1.5566 - 1355 1 1.478 80032.2 0.5099999904632568 13339 5109 18439 HBL1_DMSO_200M_050219_2,18450 HBL1_DMSO_200M_050219_2,18450, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18451 99.054 800.0 192560.0 25 0 12305.0 + 15186 IPEDILGEIAV 11 142 584.8270614533841 1167.639569973568 2 584.8288452029228 MULTI CID FTMS 0 0 0 18439 116022.71875 0.4189927477212984 -2 0.1296768188476562 12 Unmodified _IPEDILGEIAV_ ENSG00000034152|ENST00000342679|MAP2K3;nc|ENSG00000034152|P46734-2|MAP2K3;nc|ENSG00000034152|P46734-3|MAP2K3 39.94969957227396 0.2131707853268865 4 AE{I|L}{I|L}HEAV 8 5 62.702 0.0 0.0 5.37 0.0 0.0 287.1836210541698 0.0 287.1836210541698 0.0 22.1156479315672 0.0 0.0 0 0.0 0.0 1.7856668758921828 0.0 AE{I|L}{I|L}HEAV 5.37 - 7889 + 1 1.478 119553.8 0.5 13340 5109 18439 HBL1_DMSO_200M_050219_2,18451 HBL1_DMSO_200M_050219_2,18451,IPEDILGEIAV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18452 99.068 800.0 102780.0 25 0 4313.7 + -1 NGFPVFATV 9 117 951.9679837612274 1901.9214145892547 2 952.474658191204 MULTI CID FTMS 0 0 0 18439 110953.6015625 0.9689056441274384 -3 0.184051513671875 13 ENST00000477668.5_1_3:127323572-127337961:+|nuORF;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;ENSG00000073111|ENST00000265056|MCM2 4 [VP]{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}AS[Y{M(Oxidation (M))|F}]Q{I|L} 12 -1 32.846 0.0 0.0 1.727 0.0 0.0 0.0 527.2850353063856 527.2850353063856 11.943532902887686 0.0 0.0 0.0 0 0.0 1.154901959985743 0.3494850021680094 0.0 [VP]{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}AS[Y{M(Oxidation (M))|F}]Q{I|L} 1.727 - 4672 1 1.478 59440.8 0.550000011920929 13341 5109 18439 HBL1_DMSO_200M_050219_2,18452 HBL1_DMSO_200M_050219_2,18452, False False NGFPVFATV 99.06796 952.474658191204 0.0 18439.0 ENST00000477668.5_1_3:127323572-127337961:+|nuORF;;ENST00000474964.5_1_3:127323572-127340613:+|nuORF;;ENSG00000073111|ENST00000265056|MCM2 2.951003392537435 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18453 99.083 800.0 132470.0 25 0 9641.2 + 8908 FAHPDLFVSI 10 113 573.3025106848198 1144.5904684364396 2 573.3037597537041 MULTI CID FTMS 0 0 0 18439 104950.875 0.8437910963621422 -2 0.1296768188476562 14 Unmodified _FAHPDLFVSI_ ENSG00000117859|ENST00000428468|OSBPL9;ENST00000533825.1_1_1:52237763-52247292:+|nuORF;nc|ENSG00000117859|Q96SU4-2|OSBPL9;nc|ENSG00000117859|Q96SU4-3|OSBPL9;nc|ENSG00000117859|Q96SU4-4|OSBPL9;nc|ENSG00000117859|Q96SU4-5|OSBPL9;nc|ENSG00000117859|Q96SU4-6|OSBPL9;nc|ENSG00000117859|Q96SU4-7|OSBPL9 43.85829265575387 0.1168243637355526 4 {M(Oxidation (M))|F}Y{M(Oxidation (M))|F}A{I|L}WVS{I|L} 9 5 + 64.391 0.0 0.0 5.6256 5.6256 77.815 0.0 0.0 0.0 12.501225267834002 3.979400086720375 3.979400086720375 3.979400086720375 0 1.1989700043360187 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}Y{M(Oxidation (M))|F}A{I|L}WVS{I|L};{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}A{I|L}WVTV;{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]{I|L}A{M(Oxidation (M))|F}YE;{I|L}{I|L}[YN]{I|L}A{M(Oxidation (M))|F}YE;{M(Oxidation (M))|F}V[NP]A{I|L}WVS{I|L};{M(Oxidation (M))|F}V[NP]A{I|L}W{I|L}SV;{M(Oxidation (M))|F}V[NP]A{I|L}[{I|L}V]C(Carbamidomethyl (C)){I|L};{[TV]|[{I|L}S]}P{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]HVAE;{M(Oxidation (M))|F}V[NP]A{I|L}WVTV;{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}A{I|L}W{I|L}SV 5.6256;5.278;4.5334;4.4243;4.2255;4.1855;4.1364;3.9757;3.8778;3.8383 -;-;-;-;-;-;-;-;-;- 553 + 1 1.478 82567.3 0.4600000083446502 13342 5109 18439 HBL1_DMSO_200M_050219_2,18453 HBL1_DMSO_200M_050219_2,18453,FAHPDLFVSI True True FAHPDLFVSI 99.08326 573.303759753704 1730425.875 18439.0 ENST00000533825.1_1_1:52237763-52247292:+|nuORF;;nc|ENSG00000117859|Q96SU4-4|OSBPL9;;nc|ENSG00000117859|Q96SU4-2|OSBPL9;;nc|ENSG00000117859|Q96SU4-7|OSBPL9;;ENSG00000117859|ENST00000428468|OSBPL9;;nc|ENSG00000117859|Q96SU4-5|OSBPL9;;nc|ENSG00000117859|Q96SU4-6|OSBPL9;;nc|ENSG00000117859|Q96SU4-3|OSBPL9 2.5923717816670737 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18455 99.088 41.0 2495100.0 25 0 226980.0 -1 0 92 917.0955245022128 2748.264744106838 3 917.4318115115166 MULTI CID FTMS 0 0 0 18454 2334337.25 0.4941159169442139 3 -0.1869125366210937 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 54.619 0.0 0.0 1.9874 0.0 0.0 0.0 1707.6521717465027 1707.6521717465027 19.72357194224834 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9874 - 665 1 1.491 75992.5 1.0 13343 5110 18454 HBL1_DMSO_200M_050219_2,18455 HBL1_DMSO_200M_050219_2,18455, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18456 99.092 173.0 250540.0 25 0 31078.0 + 24495 MIIENFEAL 9 74 540.2755197611406 1078.536486589081 2 540.2759277224541 MULTI CID FTMS 0 0 0 18454 206865.09375 0.6388070719908285 2 -0.1449508666992187 2 Unmodified _MIIENFEAL_ ENSG00000139746|ENST00000438737|RBM26;ENST00000472143.2_1_13:79951480-79979915:-|nuORF;nc|ENSG00000139746|Q5T8P6-2|RBM26;nc|ENSG00000139746|Q5T8P6-3|RBM26;nc|ENSG00000139746|Q5T8P6-6|RBM26 26.88365393820708 0.1891292719743517 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EN{M(Oxidation (M))|F} 6 3 31.604 0.0 0.0 2.9303 0.0 0.0 0.0 328.1526724623811 328.1526724623811 11.42667503568731 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EN{M(Oxidation (M))|F} 2.9303 + + 382 1 1.491 40791.8 1.0 13344 5110 18454 HBL1_DMSO_200M_050219_2,18456 HBL1_DMSO_200M_050219_2,18456,MIIENFEAL False True MIIENFEAL 99.09172 540.275927722454 4924045.5 18454.0 nc|ENSG00000139746|Q5T8P6-6|RBM26;;ENST00000472143.2_1_13:79951480-79979915:-|nuORF;;ENSG00000139746|ENST00000438737|RBM26;;nc|ENSG00000139746|Q5T8P6-3|RBM26;;nc|ENSG00000139746|Q5T8P6-2|RBM26 6.223447322845459 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18457 99.094 121.0 760540.0 25 0 81228.0 + 37243 TILRLLQQV 9 106 542.3477902519918 1082.6810275707835 2 542.3481933474541 MULTI CID FTMS 0 0 0 18454 377324.15625 1.0 0 0.0 3 Unmodified _TILRLLQQV_ ENSG00000107581|ENST00000369144|EIF3A;ENST00000369144.7_1_10:120819204-120820315:-|nuORF;nc|ENSG00000107581|Q14152-2|EIF3A 37.77132515983256 0.0876909340306915 4 [{I|L}T]{I|L}R{I|L}{I|L}QQV 9 0 + 60.098 0.0 0.0 5.5508 5.5508 79.775 0.0 0.0 0.0 5.8705355997506246 16.478174818886373 5.8705355997506246 5.8705355997506246 0 1.298455006504028 2.0 0.0 0.0 + + [{I|L}T]{I|L}R{I|L}{I|L}QQV;{[QV]|[N{I|L}]|[RA]|[KV]}EAA{I|L}{I|L}[K{I|L}]V;[{I|L}T]{I|L}R{I|L}{I|L}Q[AG]V;[{I|L}T]{I|L}R{I|L}{I|L}[AG]QV;{[QV]|[N{I|L}]|[RA]|[KV]}KK{I|L}{I|L}QQV;[AG]VKK{I|L}{I|L}QQV;{[QN]|[E{I|L}]|[KN]}QQ{I|L}{I|L}[K{I|L}]V;{[QN]|[E{I|L}]|[KN]}{I|L}K{I|L}{I|L}QQV;{[QN]|[E{I|L}]|[KN]}NAA{I|L}{I|L}[K{I|L}]V;{[QV]|[N{I|L}]|[RA]|[KV]}E[RV]{I|L}[K{I|L}]V 5.5508;5.0086;4.7003;4.7003;4.5922;4.3692;4.3193;4.2317;4.191;4.065 +;-;-;-;-;-;-;-;-;- + 1090 1 1.491 72475.5 1.0 13345 5110 18454 HBL1_DMSO_200M_050219_2,18457 HBL1_DMSO_200M_050219_2,18457,TILRLLQQV True True TILRLLQQV 99.094231 542.348193347454 5329416.0 18454.0 ENST00000369144.7_1_10:120819204-120820315:-|nuORF;;ENSG00000107581|ENST00000369144|EIF3A;;nc|ENSG00000107581|Q14152-2|EIF3A 4.475877126057942 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18458 99.099 278.0 368530.0 25 0 60017.0 + 4045 DALSNFHFI 9 104 532.2639702515615 1062.513387569923 2 532.2645751833916 MULTI CID FTMS 0 0 0 18454 158535.25 0.3354061700616456 -2 0.1614456176757812 4 Unmodified _DALSNFHFI_ ENSG00000124383|ENST00000244230|MPHOSPH10 46.020951573049366 0.0490941689151868 4 {[DA]|[EG]}{I|L}SN{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L} 9 0 + 62.093 0.0 0.0 5.844 5.844 85.088 0.0 0.0 0.0 19.65304783738418 9.63156532247897 9.63156532247897 9.208187539523747 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}SN{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{I|L}SGG{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{I|L}[EC][RP]{M(Oxidation (M))|F}{I|L};W[WK]{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}K[HA][VP]YY 5.844;4.9773;3.8968;2.2325;0.85164 +;-;-;-;- + 557 + 1 1.491 84272.9 1.0 13346 5110 18454 HBL1_DMSO_200M_050219_2,18458 HBL1_DMSO_200M_050219_2,18458,DALSNFHFI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18459 99.113 800.0 193910.0 25 0 10001.0 -1 0 145 656.0337597073701 1965.07944972231 3 656.3691284060478 MULTI CID FTMS 0 0 0 18454 148174.0625 0.6984067458482125 -1 0.1020660400390625 5 4 T{I|L}{I|L}VV 5 -1 44.38 0.0 0.0 2.2585 0.0 0.0 1421.7175476440052 0.0 1421.7175476440052 0.0 16.800602357736665 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 T{I|L}{I|L}VV 2.2585 - 1389 1 1.491 118737.6 0.5899999737739563 13347 5110 18454 HBL1_DMSO_200M_050219_2,18459 HBL1_DMSO_200M_050219_2,18459, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18460 99.127 800.0 218440.0 25 0 24353.0 + 31100 RLLESLDQLEL 11 118 664.8744933187717 1327.7344337043432 2 664.8754150271416 MULTI CID FTMS 0 0 0 18454 136332.671875 0.5483841245796673 -1 0.1020660400390625 6 Unmodified _RLLESLDQLEL_ ENSG00000112208|ENST00000370693|BAG2 107.5634045930896 0.009905022604853 4 {[QN]|[E{I|L}]|[KN]}{I|L}RS{I|L}DQ{I|L}E{I|L} 11 2 + 120.1 0.0 0.0 9.0457 9.0457 85.358 0.0 0.0 0.0 11.447154985521948 16.575773191777927 11.447154985521948 3.0102999566398125 0 1.2614393726401687 1.3010299956639813 2.280369551124698 1.048455006504028 {[QN]|[E{I|L}]|[KN]}{I|L}RS{I|L}DQ{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KD{I|L}DQ{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}RS{I|L}D[AG]{I|L}E{I|L};{I|L}{I|L}RES{I|L}DQ{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KD{I|L}D[AG]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[RV]T{I|L}DQ{I|L}E{I|L};{I|L}{I|L}RTD{I|L}DQ{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}AAT{I|L}DQ{I|L}E{I|L};[R{I|L}]{I|L}ES{I|L}DQ{I|L}E{I|L};{I|L}{I|L}RDT{I|L}DQ{I|L}E{I|L} 9.0457;8.819;8.3582;8.1836;8.1315;8.0777;7.9568;7.8569;7.8484;7.6823 -;-;-;-;-;-;-;-;+;- + 6564 1 1.491 135660.5 0.5600000023841858 13348 5110 18454 HBL1_DMSO_200M_050219_2,18460 HBL1_DMSO_200M_050219_2,18460,RLLESLDQLEL True True RLLESLDQLEL 99.127051 664.875415027142 4098898.5 18454.0 ENSG00000112208|ENST00000370693|BAG2 5.9999680519104 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18461 99.133 301.0 305160.0 25 0 28743.0 + 21110 LPALLQQL 8 101 448.2837780329502 894.5530031327004 2 448.2839538455009 MULTI CID FTMS 0 0 0 18454 132999.8125 0.6073553461901813 1 -0.0972213745117187 7 Unmodified _LPALLQQL_ ENSG00000179262|ENST00000586534|RAD23A;nc|ENSG00000179262|P54725-2|RAD23A;nc|ENSG00000179262|P54725-3|RAD23A 30.19836241096484 0.408853459428176 4 [{I|L}P]A{I|L}{I|L}QQ{I|L} 8 0 + 42.273 0.0 0.0 4.7256 4.7256 76.525 0.0 0.0 0.0 12.21848749616356 9.419628234359578 9.419628234359578 6.020599913279625 0 0.242992819099939 1.2218487496163564 0.0 0.0 + + [{I|L}P]A{I|L}{I|L}QQ{I|L};[{I|L}P]A{I|L}Q{I|L}Q{I|L};[{I|L}P]A{I|L}{I|L}[AG]Q{I|L};[PA]{I|L}{I|L}{I|L}QQ{I|L};[{I|L}P]A{I|L}[AG]{I|L}Q{I|L};[PA]{I|L}{I|L}Q{I|L}Q{I|L};[PA]{I|L}{I|L}{I|L}[AG]Q{I|L};[VP]VV{I|L}QQ{I|L};[PA]{I|L}{I|L}[AG]{I|L}Q{I|L};{I|L}{I|L}[PA]{I|L}QQ{I|L} 4.7256;4.0526;3.6902;3.3597;3.0172;2.6867;2.3243;1.9367;1.6513;1.4605 +;-;-;-;-;-;-;-;-;- + 134 1 1.491 75754.9 1.0 13349 5110 18454 HBL1_DMSO_200M_050219_2,18461 HBL1_DMSO_200M_050219_2,18461,LPALLQQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18462 99.142 513.0 232410.0 25 0 25711.0 24503 MILDLLKSL 9 150 523.3177684994162 1044.6209840656322 2 523.3187744021416 MULTI CID FTMS 0 0 0 18454 98875.7421875 1.0 0 0.0 8 Unmodified _MILDLLKSL_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 30.63653989081413 0.1413794767160703 4 [{I|L}T]{I|L}D[{I|L}P]{M(Oxidation (M))|F}KV 9 5 + 43.879 0.0 0.0 4.2004 4.2004 83.102 0.0 0.0 0.0 21.29286670367657 9.453869454431114 9.453869454431114 35.89084675496099 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]{I|L}D[{I|L}P]{M(Oxidation (M))|F}KV;[VP][VP][{I|L}P]D{I|L}PV;{M(Oxidation (M))|F}PKK[W{I|L}]KV;{M(Oxidation (M))|F}P[KQ][W{I|L}]KV 4.2004;0.76465;0.53557;0.53557 -;-;-;- 1468 + 1 1.491 97514.5 1.0 13350 5110 18454 HBL1_DMSO_200M_050219_2,18462 HBL1_DMSO_200M_050219_2,18462,MILDLLKSL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18463 99.155 755.0 172200.0 25 0 12461.0 + 34210 SLPGELFHVV 10 153 549.3036560908008 0 549.3044311404228 PEAK CID FTMS 0 0 0 18454 106588.1484375 0.65462524429783 7 -0.416778564453125 9 Unmodified _SLPGELFHVV_ ENSG00000164603|ENST00000297145|BMT2 32.30548876998284 0.1927752022612489 4 D 1 10 12.7 0.0 0.0 1.1581 0.0 0.0 896.4765768526969 82.06684290103749 978.5434197537344 0.0 0.0 0.0 0.0 0 0.5 0.0 0.2215141619232908 0.0 D 1.1581 - 543 + 1 1.491 106082.5 1.0 13351 5110 18454 HBL1_DMSO_200M_050219_2,18463 HBL1_DMSO_200M_050219_2,18463,SLPGELFHVV False True SLPGELFHVV 99.154659 549.304431140423 3312395.25 18454.0 ENSG00000164603|ENST00000297145|BMT2 5.837393124898274 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18464 99.167 620.0 173010.0 25 0 25701.0 + 30280 QYPENILSF 9 111 555.7768051956598 1109.5390574581195 2 555.7775146365166 MULTI CID FTMS 0 0 0 18454 104411.75 0.7260272603334464 -11 0.4659194946289062 10 Unmodified _QYPENILSF_ ENSG00000189362|ENST00000409150|NEMP2;nc|ENSG00000189362|A6NFY4-2|NEMP2 52.268347100219714 0.0353964759249114 4 {I|L}N[HQ]S{M(Oxidation (M))|F} 6 6 40.107 0.0 0.0 3.6147 0.0 0.0 365.1945108033248 0.0 365.1945108033248 0.0 8.59212771846476 0.0 0.0 0 0.0 0.0 1.4802046884880935 0.8807196863200843 {I|L}N[HQ]S{M(Oxidation (M))|F} 3.6147 - 982 + 1 1.491 87433.7 1.0 13352 5110 18454 HBL1_DMSO_200M_050219_2,18464 HBL1_DMSO_200M_050219_2,18464,QYPENILSF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18465 99.18 800.0 99228.0 25 0 11563.0 + -1 YLVNDIYEL 9 134 571.293198092802 570.2859216262019 1 571.2928954958916 MULTI CID FTMS 0 0 0 18454 98499.8125 1.0 0 0.0 11 nc|ENSG00000111300|Q14CX7-2|NAA25;ENST00000552527.5_1_12:112478245-112546577:-|nuORF;ENSG00000111300|ENST00000261745|NAA25 4 {NN|[MP]|[D{I|L}]|[EV]}NV 4 -1 23.633 0.0 0.0 4.144 0.0 0.0 0.0 126.04068782176752 126.04068782176752 -1.6501298457641234 0.0 -1.6501298457641234 0.0 0 0.0 1.3979400086720375 0.0 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}NV 4.144 - 178 1 1.491 66287.8 0.449999988079071 13353 5110 18454 HBL1_DMSO_200M_050219_2,18465 HBL1_DMSO_200M_050219_2,18465, False False YLVNDIYEL 99.180495 571.292895495892 887171.125 18454.0 nc|ENSG00000111300|Q14CX7-2|NAA25;;ENST00000552527.5_1_12:112478245-112546577:-|nuORF;;ENSG00000111300|ENST00000261745|NAA25 1.7838489214579265 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18467 99.186 88.0 1083900.0 25 0 85772.0 -1 0 86 688.0731739034812 2748.2635897475247 4 688.3253661990166 MULTI CID FTMS 0 0 0 18466 848031.875 0.2607144059432042 6 -0.3195571899414062 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 61.82 0.0 0.0 2.2494 0.0 0.0 0.0 1707.6491313803765 1707.6491313803765 19.124628150806373 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.2742275032520141 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.2494 - 1761 1 1.491 78617.7 1.0 13354 5111 18466 HBL1_DMSO_200M_050219_2,18467 HBL1_DMSO_200M_050219_2,18467, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18468 99.189 116.0 518650.0 25 0 87409.0 + 41437 VPLIIVNSI 9 97 484.3126934546355 966.610833976071 2 484.3131896853447 MULTI CID FTMS 0 0 0 18466 255238.390625 0.3724042340019619 2 -0.089691162109375 2 Unmodified _VPLIIVNSI_ ENSG00000134049|ENST00000256433|IER3IP1 42.96799951952854 0.0591636306142405 4 [{I|L}P]{I|L}V{I|L}VNTV 9 4 + 52.558 0.0 0.0 5.4374 5.4374 75.353 0.0 0.0 0.0 6.020599913279625 18.19984993812689 6.020599913279625 3.0102999566398125 0 0.6237125054200235 1.0457574905606752 0.0 0.0 [{I|L}P]{I|L}V{I|L}VNTV;[{I|L}P]V{I|L}{I|L}VNTV;[{I|L}P]{I|L}{I|L}VVNTV;[VP]{I|L}{I|L}{I|L}VNTV;{I|L}{I|L}PV{I|L}VNTV;{I|L}{I|L}P{I|L}VVNTV;[{I|L}V]P{I|L}{I|L}VNTV 5.4374;5.126;5.126;4.8145;4.7453;4.4338;3.9492 -;-;-;-;-;-;- 370 1 1.491 51332.6 1.0 13355 5111 18466 HBL1_DMSO_200M_050219_2,18468 HBL1_DMSO_200M_050219_2,18468,VPLIIVNSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18469 99.192 181.0 391680.0 25 0 53264.0 + 6656 EAWPALQI 8 96 464.2504141008629 926.486275268526 2 464.2506591677666 MULTI CID FTMS 0 0 0 18466 357601.15625 0.2862882263046672 -6 0.4125442504882812 3 Unmodified _EAWPALQI_ ENSG00000158526|ENST00000375151|TSR2 81.86404211737425 0.0837039284849515 4 [PA]WEA{I|L}[Q{I|L}] 8 2 + 46.124 0.0 0.0 4.9784 4.9784 76.871 0.0 0.0 0.0 9.352771040912025 6.989700043360188 6.989700043360188 5.440680443502757 0 0.3494850021680094 1.0969100130080565 0.8807196863200843 0.0 [PA]WEA{I|L}[Q{I|L}];[PA]EWA{I|L}[Q{I|L}];{[CP]|[EA]}WPA{I|L}[Q{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EPA{I|L}[Q{I|L}];[PA]EAW{I|L}[Q{I|L}];[PA]{I|L}EAW[Q{I|L}];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PEA{I|L}[Q{I|L}];[VP][CS]PA{I|L}[Q{I|L}];[PA]E{I|L}AW[Q{I|L}];[PG][MT]PA{I|L}[Q{I|L}] 4.9784;4.3912;3.9689;3.8221;3.4543;3.378;3.2301;3.1473;2.9808;2.8224 -;-;+;-;-;-;-;-;-;- + 269 1 1.491 57581.7 1.0 13356 5111 18466 HBL1_DMSO_200M_050219_2,18469 HBL1_DMSO_200M_050219_2,18469,EAWPALQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18470 99.195 140.0 624350.0 25 0 84752.0 + 34739 SPYPWPLNHI 10 73 612.3143340079008 1222.6141150826015 2 612.3141357302666 MULTI CID FTMS 0 0 0 18466 350112.5 0.8545435476950947 6 -0.3195571899414062 4 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 58.6788170122104 0.0400518768368984 4 [PS]YPW{I|L}PV[HQ] 10 4 + 70.64 0.0 0.0 5.7778 5.7778 74.644 0.0 0.0 0.0 17.058546584526795 1.818435879447733 1.818435879447733 1.818435879447733 0 0.9247425010840048 1.5228787452803376 0.0 1.1549471895720984 [PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PNH{I|L};[PS]YPW{I|L}PGGH{I|L};[PS]YPKK[WK][CS] 5.7778;5.629;3.9348;3.3073 -;-;-;- 230 + 1 1.491 67081.0 1.0 13357 5111 18466 HBL1_DMSO_200M_050219_2,18470 HBL1_DMSO_200M_050219_2,18470,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18471 99.201 296.0 273420.0 25 0 20274.0 + 30867 RIMNLTVML 9 94 545.8102722558166 0 545.8093749880791 PEAK CID FTMS 0 0 0 18466 133019.875 0.8853067792075089 -1 0.0972213745117187 5 Unmodified _RIMNLTVML_ ENSG00000120526|ENST00000239690|NUDCD1;nc|ENSG00000120526|Q96RS6-2|NUDCD1 22.736283301280096 0.1762661025464585 4 MVT{I|L} 4 6 26.459 0.0 0.0 2.4283 0.0 0.0 131.0978986253038 511.2462252252562 642.34412385056 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.5 0.0 MVT{I|L} 2.4283 - 105 + 1 1.491 69380.0 1.0 13358 5111 18466 HBL1_DMSO_200M_050219_2,18471 HBL1_DMSO_200M_050219_2,18471,RIMNLTVML False True RIMNLTVML 99.200534 545.809374988079 1167917.375 18466.0 nc|ENSG00000120526|Q96RS6-2|NUDCD1;;ENSG00000120526|ENST00000239690|NUDCD1 4.224144220352173 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18472 99.214 800.0 99755.0 25 0 6478.5 + 17115 KLFPGFEIETV 11 111 640.3502948618171 1278.6860367904342 2 640.3502685427666 MULTI CID FTMS 0 0 0 18466 116945.7265625 0.6719331091140273 2 -0.089691162109375 6 Unmodified _KLFPGFEIETV_ ENSG00000070669|ENST00000394308|ASNS;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS 71.70789743142352 0.0274550572689813 4 {NN|[MP]|[D{I|L}]|[EV]}PA{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV 11 5 + 86.144 0.0 0.0 6.7369 6.7369 77.785 0.0 0.0 0.0 1.6779089339072897 16.57577319177794 1.6779089339072897 1.6779089339072897 0 0.5 1.3979400086720375 2.1989700043360187 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}PA{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;[DP]{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;[VP]EA{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;{[QN]|[E{I|L}]|[KN]}[PG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;{NN|[MP]|[D{I|L}]|[EV]}PA{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}TEV;[DP]{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}TEV;[{I|L}P]DA{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}ETV;[PG]{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}K{I|L}ETV;[VP]EA{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{I|L}TEV;[{I|L}V][DC]{I|L}{M(Oxidation (M))|F}K{I|L}ETV 6.7369;6.6057;6.4615;5.9919;5.8127;5.6815;5.663;5.6383;5.5373;5.301 -;-;-;-;-;-;-;-;-;- 1845 1 1.491 68042.1 0.5 13359 5111 18466 HBL1_DMSO_200M_050219_2,18472 HBL1_DMSO_200M_050219_2,18472,KLFPGFEIETV True True KLFPGFEIETV 99.214372 640.350268542767 4334126.0 18466.0 nc|ENSG00000070669|P08243-2|ASNS;;nc|ENSG00000070669|P08243-3|ASNS;;ENSG00000070669|ENST00000394308|ASNS 6.938348293304443 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18473 99.228 800.0 128240.0 25 0 5876.0 -1 0 115 777.0568897185756 2328.1488397559265 3 777.3927490115166 MULTI CID FTMS 0 0 0 18466 113272.78125 0.978159769854856 -2 0.1992874145507812 7 4 {[TV]|[{I|L}S]}[DN]TV{M(Oxidation (M))|F}VYY{I|L}DR 13 -1 67.472 0.0 0.0 2.8981 0.0 0.0 0.0 739.3814807073514 739.3814807073514 13.072524999866149 0.0 0.0 0.0 0 0.0 2.0 1.5044321917401078 0.0 {[TV]|[{I|L}S]}[DN]TV{M(Oxidation (M))|F}VYY{I|L}DR 2.8981 - 85203 1 1.491 88034.2 0.5 13360 5111 18466 HBL1_DMSO_200M_050219_2,18473 HBL1_DMSO_200M_050219_2,18473, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18475 99.245 800.0 104520.0 25 0 19026.0 + 18140 KTMEQIELLL 10 94 609.3435307947844 1216.6725086563688 2 609.3447753787041 MULTI CID FTMS 0 0 0 18474 68679.296875 0.7044412585522468 1 -0.041961669921875 1 Unmodified _KTMEQIELLL_ ENSG00000183763|ENST00000331456|TRAIP 40.23920728925047 0.1550410903091231 4 {[QN]|[E{I|L}]|[KN]}{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}E{I|L}{I|L}{I|L} 10 4 + 68.839 0.0 0.0 5.658 5.658 71.254 0.0 0.0 0.0 0.4446121012186523 16.53212513775344 0.4446121012186523 0.4446121012186523 0 0.9247425010840048 1.154901959985743 0.805462187404089 0.7134679910804405 {[QN]|[E{I|L}]|[KN]}{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}E{I|L}{I|L}{I|L};{I|L}{I|L}E{[{M(Oxidation (M))|F}D]|MM}{I|L}E{I|L}{I|L}{I|L};{I|L}{I|L}[KS]{[C(Carbamidomethyl (C))E]|[WC]}E{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}P[YE]{I|L}E{I|L}{I|L}{I|L};{I|L}{I|L}E{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}E{I|L}{I|L};{[TV]|[{I|L}S]}[K{I|L}]{[C(Carbamidomethyl (C))E]|[WC]}E{I|L}{I|L}{I|L};{I|L}{I|L}E[C(Carbamidomethyl (C))D][KT]{I|L}{I|L}{I|L};{I|L}{I|L}[KS]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}E{I|L}{I|L};[QT]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q{I|L}E{I|L}{I|L}{I|L} 5.658;5.6214;5.4611;4.9094;4.8137;4.5011;4.4945;4.3267;4.3043;4.1343 -;-;-;-;-;-;-;-;-;- 507 1 1.491 66915.2 0.4600000083446502 13361 5112 18474 HBL1_DMSO_200M_050219_2,18475 HBL1_DMSO_200M_050219_2,18475,KTMEQIELLL False True KTMEQIELLL 99.244599 609.344775378704 873837.4375 18474.0 ENSG00000183763|ENST00000331456|TRAIP 4.877572695414226 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18476 99.248 148.0 447330.0 25 0 86086.0 + 19802 LGTPQQIIV 9 112 484.7933514940101 967.57215005482 2 484.7927734255791 MULTI CID FTMS 0 0 0 18474 163371.328125 0.8937216608176557 -1 0.0477294921875 2 Unmodified _LGTPQQIIV_ REV__ENSG00000135298|ENST00000370598|ADGRB3;REV__nc|ENSG00000135298|O60242-2|ADGRB3 39.957323273325 0.0756908302845263 4 [{I|L}P]QSAQ{I|L}[{I|L}V] 9 -1 + 52.774 0.0 0.0 5.4543 5.4543 83.446 0.0 0.0 0.0 12.477464723953524 7.147642715192504 7.147642715192504 9.208187539523747 0 0.5 0.8538719643217619 0.805462187404089 0.6109243748081782 [{I|L}P]QSAQ{I|L}[{I|L}V];[{I|L}P]QSA[AG]{I|L}[{I|L}V];[{I|L}P]VPMS{I|L}[{I|L}V];[{I|L}P]PVMS{I|L}[{I|L}V];[{I|L}P][AG]SAQ{I|L}[{I|L}V];[VP]{I|L}PMS{I|L}[{I|L}V];[VP]AASAQ{I|L}[{I|L}V];[{I|L}P]Q[QA]S{I|L}[{I|L}V];[VP][QT]AQ{I|L}[{I|L}V];{[TV]|[{I|L}S]}[QP]AQ{I|L}[{I|L}V] 5.4543;4.5026;4.4426;4.2606;4.1869;4.1647;3.9091;3.7538;3.5497;3.3425 -;-;-;-;-;-;-;-;-;- 464 1 1.491 55993.0 1.0 13362 5112 18474 HBL1_DMSO_200M_050219_2,18476 HBL1_DMSO_200M_050219_2,18476,LGTPQQIIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18477 99.26 728.0 234880.0 25 0 35570.0 27194 PGGPAGQA 8 148 327.6633756010158 653.3121982688316 2 327.6632873415947 MULTI CID FTMS 0 0 0 18474 144004.0 0.3063148495492783 -3 0.2470169067382812 3 Unmodified _PGGPAGQA_ ENST00000288774.7_1_1:2336406-2336715:-|nuORF 0.0 0.8243325171867699 4 {I|L} 1 8 8.9794 0.0 0.0 1.3744 0.0 0.0 410.10611108797065 127.0992373102172 537.2053483981879 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 1.3744 - 13 + 1 1.491 135806.1 1.0 13363 5112 18474 HBL1_DMSO_200M_050219_2,18477 HBL1_DMSO_200M_050219_2,18477,PGGPAGQA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18478 99.27 570.0 211340.0 25 0 22908.0 + 31972 RVFEVSLADL 10 98 574.8183136024314 1147.6220742716628 2 574.8184692263603 MULTI CID FTMS 0 0 0 18474 129642.3359375 0.7443633633081342 -1 0.0477294921875 4 Unmodified _RVFEVSLADL_ ENSG00000145425|ENST00000274065|RPS3A 47.7319792270244 0.0934623409360514 4 {[TV]|[{I|L}S]}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VS{I|L}AD{I|L} 11 3 + 76.022 0.0 0.0 6.6243 6.6243 81.463 0.0 0.0 0.0 3.798093237063512 3.798093237063512 3.798093237063512 3.798093237063512 0 1.274227503252014 1.154901959985743 0.9749073637206092 0.0 {[TV]|[{I|L}S]}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VS{I|L}AD{I|L};[{M(Oxidation (M))|F}V]A{I|L}SV{[RE]|[WV]}D{I|L};[{M(Oxidation (M))|F}V]A{I|L}SV[{I|L}T]AD{I|L};[RV]{M(Oxidation (M))|F}EVS{I|L}AD{I|L};{[TV]|[{I|L}S]}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VS{I|L}W{I|L};[{I|L}A]S{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VS{I|L}AD{I|L};[{M(Oxidation (M))|F}V]A{I|L}SVE{[VA]|[{I|L}G]}T{I|L};{[SA]|[TG]}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VS{I|L}AD{I|L};[{M(Oxidation (M))|F}V]A{I|L}SVE[{I|L}A]S{I|L};[{M(Oxidation (M))|F}V]A{I|L}SV{[RE]|[WV]}EV 6.6243;6.2934;6.1239;5.7255;5.6157;5.4474;5.1647;4.8432;4.8169;4.7968 -;-;-;+;-;-;-;-;-;- + 783 1 1.491 97968.8 1.0 13364 5112 18474 HBL1_DMSO_200M_050219_2,18478 HBL1_DMSO_200M_050219_2,18478,RVFEVSLADL True True RVFEVSLADL 99.270176 574.81846922636 1106324.625 18474.0 ENSG00000145425|ENST00000274065|RPS3A 7.111468156178792 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18480 99.275 9.3 5143400.0 25 0 671160.0 + 35610 STYKFFEVI 9 63 567.2977130476181 1132.580873162036 2 567.2980224490166 MULTI CID FTMS 0 0 0 18479 5615584.0 1.0 0 0.0 1 Unmodified _STYKFFEVI_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 24.020572477871973 0.2255576514309169 4 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKY{[MG]|[TS]}V{I|L} 9 6 + 34.326 0.0 0.0 3.0308 3.0308 71.213 0.0 0.0 0.0 6.020599913279629 7.415215343448629 6.020599913279629 6.020599913279629 0 0.8182503180159344 0.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKY{[MG]|[TS]}V{I|L};[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}KY{[MG]|[TS]}V{I|L};[YK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[MG]|[TS]}V{I|L};[{M(Oxidation (M))|F}E]G[RH]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KT 3.0308;2.4992;1.2198;0.33966 -;-;-;- 148 1 1.491 46176.6 1.0 13365 5113 18479 HBL1_DMSO_200M_050219_2,18480 HBL1_DMSO_200M_050219_2,18480,STYKFFEVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18481 99.277 96.0 598320.0 25 0 88586.0 + 15302 IPISNILMV 9 81 508.296204632002 1014.577856330804 2 508.2967712283134 MULTI CID FTMS 0 0 0 18479 559617.3125 0.5151724810113123 4 -0.2298660278320312 2 Oxidation (M) _IPISNILM(Oxidation (M))V_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 57.47134341890925 0.0274820932774257 4 [{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V 9 2 + 74.253 0.0 0.0 7.3186 7.3186 87.934 0.0 0.0 0.0 7.447274948966935 3.480137174129325 3.480137174129325 7.447274948966935 0 1.0994850021680094 1.6989700043360187 0.9634679910804403 0.7302046884880937 [{I|L}P]SN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}NP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}N{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}PN{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[{I|L}P]SGG{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;[NS]{I|L}P{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}{I|L}NP{I|L}{I|L}{M(Oxidation (M))|F}V;[NS]{I|L}{I|L}P{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}N{I|L}{I|L}P{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}GGP{I|L}{I|L}{I|L}{M(Oxidation (M))|F}V 7.3186;6.5846;6.5368;6.1143;5.6913;5.5581;5.5104;5.5104;5.0177;4.9573 -;-;-;-;-;-;-;-;-;- 610 1 1.491 51299.5 1.0 13366 5113 18479 HBL1_DMSO_200M_050219_2,18481 HBL1_DMSO_200M_050219_2,18481,IPISNILMV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18482 99.28 131.0 682040.0 25 0 79675.0 + 21628 LPLAHVLEL 9 97 502.8104594408647 1003.6063659485294 2 502.8107787966728 MULTI CID FTMS 0 0 0 18479 444766.71875 0.3427826964635558 -8 0.5022354125976562 3 Unmodified _LPLAHVLEL_ ENSG00000068366|ENST00000672401|ACSL4;ENSG00000123983|ENST00000357430|ACSL3;nc|ENSG00000068366|O60488|ACSL4 70.71552829651908 0.0208223590022201 4 {I|L}PY{I|L}VP 6 6 64.954 0.0 0.0 6.472 0.0 0.0 0.0 318.15729234169595 318.15729234169595 38.69270402820529 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}PY{I|L}VP 6.472 - 845 + 1 1.491 74019.4 1.0 13367 5113 18479 HBL1_DMSO_200M_050219_2,18482 HBL1_DMSO_200M_050219_2,18482,LPLAHVLEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18483 99.282 99.0 842580.0 25 0 104690.0 + 37628 TLLLRTPLL 9 97 520.3468179071958 1038.6790828811916 2 520.3477661013603 MULTI CID FTMS 0 0 0 18479 339464.71875 0.7147431154576829 3 -0.2152252197265625 4 Unmodified _TLLLRTPLL_ REV__ENST00000525250.5_1_11:820874-821186:+|nuORF 46.020951573049366 0.0490941689151868 4 [{I|L}T]{I|L}R[{I|L}P]{I|L}T{I|L} 9 -1 + 46.18 0.0 0.0 4.446 4.446 83.962 0.0 0.0 0.0 8.850045316126142 6.693226495331203 6.693226495331203 33.47206654899183 0 1.0317183090963749 2.0 0.75 0.0 [{I|L}T]{I|L}R[{I|L}P]{I|L}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KK[{I|L}P]{I|L}T{I|L} 4.446;1.2234 -;- 271 1 1.491 70176.0 1.0 13368 5113 18479 HBL1_DMSO_200M_050219_2,18483 HBL1_DMSO_200M_050219_2,18483,TLLLRTPLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18484 99.286 211.0 409730.0 25 0 47518.0 27702 PLKVPCGPFL 10 92 535.8057363247569 1069.5969197163138 2 536.3038818240166 MULTI CID FTMS 0 0 0 18479 307782.84375 0.8693551896458206 8 -0.325897216796875 5 Unmodified _PLKVPCGPFL_ ENST00000582788.5_1_17:37872360-37873734:+|nuORF;ENST00000583038.5_1_17:37872360-37881463:+|nuORF 12.531546534597751 0.6372748319968624 4 [{I|L}P]P[YQ]PP{I|L} 8 5 25.328 0.0 0.0 2.368 0.0 0.0 0.0 161.0617184491006 161.0617184491006 2.931825014007213 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}P]P[YQ]PP{I|L} 2.368 - 193 1 1.491 76443.6 1.0 13369 5113 18479 HBL1_DMSO_200M_050219_2,18484 HBL1_DMSO_200M_050219_2,18484,PLKVPCGPFL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18485 99.29 246.0 270970.0 25 0 48310.0 + 35879 SVLNVLHSL 9 82 491.2902326688864 980.5659124045728 2 491.2901489138603 MULTI CID FTMS 0 0 0 18479 202138.046875 0.0886289431168255 4 -0.2298660278320312 6 Unmodified _SVLNVLHSL_ ENSG00000100129|ENST00000652021|EIF3L;nc|ENSG00000100129|Q9Y262-2|EIF3L 52.268347100219714 0.0353964759249114 4 [VS]{I|L}NV{I|L}[HS]{I|L} 9 0 + 66.563 0.0 0.0 6.7883 6.7883 88.699 0.0 0.0 0.0 37.12189282359297 16.866130211356065 16.866130211356065 9.208187539523747 0 0.4247425010840047 2.0 1.5994850021680094 0.0 + + [VS]{I|L}NV{I|L}[HS]{I|L};[VS]{I|L}GGV{I|L}[HS]{I|L};{[VA]|[{I|L}G]}GQ{I|L}VN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VN{I|L}[PA];{[VA]|[{I|L}G]}GQ{I|L}VGG{I|L}[PA];{[VA]|[{I|L}G]}G[AG]{I|L}VN{I|L}[PA];{[VA]|[{I|L}G]}GVH{I|L}S{I|L}[VS];{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{I|L}VN{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VGG{I|L}[PA];{[QV]|[N{I|L}]|[RA]|[KV]}VH{I|L}S{I|L}[VS] 6.7883;5.8492;4.0484;3.604;3.1138;3.1138;2.6942;2.665;2.665;2.6381 +;-;-;-;-;-;-;-;-;- + 433 + 1 1.491 56960.1 1.0 13370 5113 18479 HBL1_DMSO_200M_050219_2,18485 HBL1_DMSO_200M_050219_2,18485,SVLNVLHSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18486 99.294 212.0 490940.0 25 0 33724.0 + 37644 TLLRLLYEA 9 108 546.3266554999701 1090.63875806674 2 546.3298217654228 MULTI CID FTMS 0 0 0 18479 188615.84375 0.2122495081030077 -5 0.348358154296875 7 Unmodified _TLLRLLYEA_ ENSG00000149100|ENST00000531120|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF;nc|ENSG00000149100|Q7L2H7-2|EIF3M 42.312485326615175 0.0627620958981271 4 [{I|L}T]{I|L}R{I|L}{I|L}YEA 9 0 + 73.465 0.0 0.0 6.7359 6.7359 90.224 0.0 0.0 0.0 22.24301211992909 55.40484985457368 22.24301211992909 11.588709367037282 0 1.635151878060192 2.0 0.0 0.0 + + [{I|L}T]{I|L}R{I|L}{I|L}YEA;[{I|L}T]{I|L}R{I|L}Y{I|L}EA;{I|L}{I|L}[R{I|L}]T{I|L}YEA;{I|L}{I|L}[YR]{I|L}T{I|L}EA;{I|L}{I|L}[R{I|L}]TY{I|L}EA;{I|L}{I|L}[R{I|L}]YT{I|L}EA;{I|L}{I|L}[YR]{I|L}E[{I|L}T]A;{I|L}{I|L}[R{I|L}]YE[{I|L}T]A;{I|L}{I|L}[YR]E{I|L}[{I|L}T]A;{I|L}{I|L}[YR]ET{I|L}{I|L}A 6.7359;5.6734;4.3303;3.3613;3.2677;2.9917;2.3515;1.9819;1.914;1.0859 +;-;-;-;-;-;-;-;-;- + 316 1 1.491 83097.8 1.0 13371 5113 18479 HBL1_DMSO_200M_050219_2,18486 HBL1_DMSO_200M_050219_2,18486,TLLRLLYEA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18487 99.308 800.0 274340.0 25 0 46866.0 + -1 LVPSDFLSV 9 102 976.5348143601806 0 976.5333129763604 PEAK CID FTMS 0 0 0 18479 155671.8125 0.4845763323544203 3 -0.2152252197265625 8 ENSG00000158941|ENST00000308511|CCAR2;nc|ENSG00000158941|Q8N163-2|CCAR2 4 VSV{I|L}{I|L}{M(Oxidation (M))|F}D 7 -1 51.769 0.0 0.0 2.6534 0.0 0.0 993.5202379959486 181.0621126764281 1174.5823506723768 0.0 0.0 0.0 0.0 0 0.0 0.0 1.731295889838706 0.0 VSV{I|L}{I|L}{M(Oxidation (M))|F}D 2.6534 - 2323 + 1 1.491 145341.4 0.6100000143051147 13372 5113 18479 HBL1_DMSO_200M_050219_2,18487 HBL1_DMSO_200M_050219_2,18487, False False LVPSDFLSV 99.308354 976.53331297636 3858270.75 18479.0 ENSG00000158941|ENST00000308511|CCAR2;;nc|ENSG00000158941|Q8N163-2|CCAR2 4.02660083770752 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18488 99.321 711.0 470150.0 25 0 56164.0 + 24128 LYPLALKTL 9 149 516.3289728066453 1030.6433926800903 2 516.8303710818291 MULTI CID FTMS 0 0 0 18479 132938.796875 0.3295207595666015 -4 0.2889785766601562 9 Unmodified _LYPLALKTL_ REV__ENSG00000087076|ENST00000263278|HSD17B14 37.97399986684836 0.0865783450051559 4 Y{I|L}AP{I|L}{I|L}KT{I|L} 9 -1 + 96.05 0.0 0.0 9.3195 9.3195 80.05 0.0 0.0 0.0 40.4054679453676 14.09256854528806 14.09256854528806 0.1722032235195314 0 0.9896518287104438 2.0 1.0565533887547016 0.3807196863200844 Y{I|L}AP{I|L}{I|L}KT{I|L};Y{I|L}A{I|L}P{I|L}KT{I|L};Y{I|L}AP{I|L}{I|L}TK{I|L};Y{I|L}A{I|L}P{I|L}TK{I|L};[{I|L}P]{I|L}TK[KG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{I|L}T]P{I|L}K[KG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 9.3195;9.3028;8.8511;8.8344;1.8172;0.6597 -;-;-;-;-;- 1137 + 1 1.491 251461.5 1.0 13373 5113 18479 HBL1_DMSO_200M_050219_2,18488 HBL1_DMSO_200M_050219_2,18488,LYPLALKTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18489 99.327 335.0 215360.0 25 0 17901.0 + 27424 PIPTSEPPLLE 11 97 596.8265677387212 1191.6385825442424 2 596.8268920779228 MULTI CID FTMS 0 0 0 18479 127775.796875 0.856066006783079 -2 0.089691162109375 10 Unmodified _PIPTSEPPLLE_ REV__ENSG00000114867|ENST00000346169|EIF4G1;REV__ENST00000442406.5_1_3:184038690-184052693:+|nuORF;REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000114867|Q04637-4|EIF4G1;REV__nc|ENSG00000114867|Q04637-5|EIF4G1;REV__nc|ENSG00000114867|Q04637-6|EIF4G1;REV__nc|ENSG00000114867|Q04637-7|EIF4G1;REV__nc|ENSG00000114867|Q04637-8|EIF4G1;REV__nc|ENSG00000114867|Q04637-9|EIF4G1 21.53697664764585 0.586507868110548 4 [{I|L}P]EDPP{I|L}E{[VA]|[{I|L}G]}{I|L} 11 -1 + 46.876 0.0 0.0 3.9338 3.9338 66.084 0.0 0.0 0.0 2.6760624017703094 13.84576047114055 2.6760624017703094 1.249387366082999 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}P]EDPP{I|L}E{[VA]|[{I|L}G]}{I|L};[{I|L}P]PEDP{I|L}E{[VA]|[{I|L}G]}{I|L};{[QN]|[E{I|L}]|[KN]}PDPP{I|L}E{[VA]|[{I|L}G]}{I|L};[{I|L}P]EPDP{I|L}E{[VA]|[{I|L}G]}{I|L};[{I|L}P]EDPP{I|L}T[TP]{I|L};[DP]E{I|L}PP{I|L}E{[VA]|[{I|L}G]}{I|L};{[QN]|[E{I|L}]|[KN]}PPDP{I|L}E{[VA]|[{I|L}G]}{I|L};[{I|L}P]PEDP{I|L}T[TP]{I|L};{[QN]|[E{I|L}]|[KN]}PDPP{I|L}T[TP]{I|L};[{I|L}P]EPDP{I|L}T[TP]{I|L} 3.9338;3.8289;3.7092;3.6812;3.5334;3.523;3.4566;3.4285;3.3088;3.2808 -;-;-;-;-;-;-;-;-;- 633 1 1.491 59427.8 1.0 13374 5113 18479 HBL1_DMSO_200M_050219_2,18489 HBL1_DMSO_200M_050219_2,18489,PIPTSEPPLLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18490 99.333 359.0 257930.0 25 0 49794.0 23747 LTWVWTLSI 9 113 559.8135369572796 1117.612520981359 2 559.8141357302666 MULTI CID FTMS 0 0 0 18479 115456.9375 0.1271225531049875 4 -0.2298660278320312 11 Unmodified _LTWVWTLSI_ ENST00000580812.1_1_17:27530960-27531002:-|nuORF 23.1484247019978 0.2366544122328345 4 R{I|L}{I|L}{I|L} 4 7 29.725 0.0 0.0 2.6597 0.0 0.0 604.2355213849625 0.0 604.2355213849625 0.0 2.7422750325201406 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 R{I|L}{I|L}{I|L} 2.6597 - 139 1 1.491 75764.1 1.0 13375 5113 18479 HBL1_DMSO_200M_050219_2,18490 HBL1_DMSO_200M_050219_2,18490,LTWVWTLSI False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18491 99.348 800.0 152910.0 25 0 14913.0 + 20586 LLPASHPPL 9 109 472.781783164464 943.549013395728 2 472.7820312380791 MULTI CID FTMS 0 0 0 18479 90873.1875 0.5535526731197703 -14 0.65283203125 12 Unmodified _LLPASHPPL_ ENST00000443023.5_1_2:200323000-200323417:-|nuORF 36.04419817259434 0.0971720506436186 4 {I|L}PA{I|L}{M(Oxidation (M))|F}[RD]{I|L} 8 5 + 64.391 0.0 0.0 6.8243 6.8243 82.917 0.0 0.0 0.0 50.92268479296628 3.900925144087779 3.900925144087779 4.259687322722812 0 0.8807196863200843 1.5228787452803376 0.0 0.0 {I|L}PA{I|L}{M(Oxidation (M))|F}[RD]{I|L};{I|L}PA{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}V;{I|L}P{I|L}A{M(Oxidation (M))|F}[RD]{I|L};{I|L}P{I|L}A{M(Oxidation (M))|F}{[RE]|[WV]}V;{I|L}{I|L}PA{M(Oxidation (M))|F}[RD]{I|L};{I|L}{I|L}PA{M(Oxidation (M))|F}{[RE]|[WV]}V 6.8243;6.3728;6.1922;5.7408;5.0993;4.6478 -;-;-;-;-;- 321 + 1 1.491 98911.6 0.3799999952316284 13376 5113 18479 HBL1_DMSO_200M_050219_2,18491 HBL1_DMSO_200M_050219_2,18491,LLPASHPPL True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18492 99.352 168.0 513830.0 25 0 65134.0 + 45327 YSLEKVFGI 9 125 528.2940299175826 1054.5735069019652 2 528.2939941287041 MULTI CID FTMS 0 0 0 18479 94952.5390625 0.194382061466949 -5 0.348358154296875 13 Unmodified _YSLEKVFGI_ ENSG00000102316|ENST00000375068|MAGED2;nc|ENSG00000102316|Q9UNF1-2|MAGED2 56.17704186161178 0.0281986971544335 4 YS{I|L}E 4 5 60.433 0.0 0.0 5.7306 0.0 0.0 0.0 559.3251233323002 559.3251233323002 24.13491294735769 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + YS{I|L}E 5.7306 + + 1530 + 1 1.491 72100.3 1.0 13377 5113 18479 HBL1_DMSO_200M_050219_2,18492 HBL1_DMSO_200M_050219_2,18492,YSLEKVFGI True True YSLEKVFGI 99.351546 528.293994128704 2840084.5 18479.0 ENSG00000102316|ENST00000375068|MAGED2;;nc|ENSG00000102316|Q9UNF1-2|MAGED2 7.783945401509603 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18494 99.357 59.0 801770.0 25 0 97865.0 -1 0 51 917.0955245022128 2748.264744106838 3 917.4318115115166 MULTI CID FTMS 0 0 0 18493 932944.1875 0.1974789943759571 7 -0.244537353515625 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 50.812 0.0 0.0 1.8489 0.0 0.0 0.0 1707.650735630039 1707.650735630039 21.11941264025134 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8489 - 112 1 1.51 42992.8 1.0 13378 5114 18493 HBL1_DMSO_200M_050219_2,18494 HBL1_DMSO_200M_050219_2,18494, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18495 99.36 138.0 443040.0 25 0 79195.0 + 4046 DALSNFHFI 9 78 532.2639702515615 1062.513387569923 2 532.2642089724541 MULTI CID FTMS 0 0 0 18493 319815.46875 0.6766197517580942 2 -0.1338653564453125 2 Unmodified _DALSNFHFI_ ENSG00000124383|ENST00000244230|MPHOSPH10 61.357469665136826 0.0253304979873734 4 {[DA]|[EG]}{I|L}SN{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L} 9 0 + 69.58 0.0 0.0 6.5486 6.5486 87.776 0.0 0.0 0.0 20.65343460101261 9.710536658395128 9.710536658395128 9.208187539523747 0 1.2302046884880935 2.0 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}SN{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{I|L}SGG{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{I|L}S[PG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{I|L}[EC][RP]{M(Oxidation (M))|F}{I|L};{[DA]|[EG]}{I|L}[EC][R{M(Oxidation (M))|F}]P{I|L};W[WK]{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L};W[WQ]{M(Oxidation (M))|F}H{M(Oxidation (M))|F}{I|L} 6.5486;5.682;3.9173;3.7941;3.1645;2.5788;2.5788 +;-;-;-;-;-;- + 337 + 1 1.51 52654.9 1.0 13379 5114 18493 HBL1_DMSO_200M_050219_2,18495 HBL1_DMSO_200M_050219_2,18495,DALSNFHFI True True DALSNFHFI 99.359741 532.264208972454 7137040.0 18493.0 ENSG00000124383|ENST00000244230|MPHOSPH10 7.125191529591878 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18496 99.37 557.0 200710.0 25 0 13704.0 + -1 IPCMTQIS 8 113 483.2240647845241 964.433576635848 2 483.2240783572197 MULTI CID FTMS 0 0 0 18493 292856.8125 0.7889131457238833 -5 0.3703384399414062 3 Carbamidomethyl (C),Oxidation (M) _IPC(Carbamidomethyl (C))M(Oxidation (M))TQIS_ REV__ENSG00000106305|ENST00000223029|AIMP2;REV__nc|ENSG00000106305|Q13155-2|AIMP2 19.438996006549623 0.6237395211498085 4 {I|L}E[HC][YT]S{I|L} 8 -1 + 36.247 0.0 0.0 3.7584 3.7584 71.726 0.0 0.0 0.0 4.771212547196626 9.030899869919438 4.771212547196626 4.771212547196626 0 0.3807196863200844 0.0 0.3054621874040891 0.0 {I|L}E[HC][YT]S{I|L};E{I|L}[HC][YT]S{I|L};{I|L}E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))S]S{I|L};{I|L}E{[C(Carbamidomethyl (C))E]|[WC]}{[QS]|[NT]}S{I|L};{I|L}E[HC][YT]TV;E{I|L}[HC][YT]TV;E{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))S]S{I|L};{I|L}E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))S]TV;E{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{[QS]|[NT]}S{I|L};{I|L}E{[C(Carbamidomethyl (C))E]|[WC]}{[QS]|[NT]}TV 3.7584;3.2637;3.2399;3.1267;2.822;2.3273;2.3048;2.3035;2.1916;2.1904 -;-;-;-;-;-;-;-;-;- 249 + 1 1.51 88705.1 1.0 13380 5114 18493 HBL1_DMSO_200M_050219_2,18496 HBL1_DMSO_200M_050219_2,18496,IPCMTQIS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18497 99.373 167.0 293230.0 25 0 28482.0 + 2496 AQYFEPLTL 9 79 541.280852982329 1080.5471530314578 2 541.2814819216728 MULTI CID FTMS 0 0 0 18493 234289.96875 0.8964067050448052 -1 0.08135986328125 4 Unmodified _AQYFEPLTL_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 39.957323273325 0.0756908302845263 4 [{I|L}T]P{I|L} 4 7 28.659 0.0 0.0 2.6522 0.0 0.0 0.0 653.2550442270234 653.2550442270234 10.699849938126889 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3252574989159953 0.0 [{I|L}T]P{I|L} 2.6522 - 125 1 1.51 46761.4 1.0 13381 5114 18493 HBL1_DMSO_200M_050219_2,18497 HBL1_DMSO_200M_050219_2,18497,AQYFEPLTL True True AQYFEPLTL 99.372785 541.281481921673 2257162.25 18493.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 5.584925651550293 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18498 99.376 171.0 570290.0 25 0 67223.0 -1 PLNMLLPLL 9 115 520.3146646047426 1038.614776276285 2 520.3138305544853 MULTI CID FTMS 0 0 0 18493 206482.4375 0.5832708494251098 3 -0.1485061645507812 5 Oxidation (M) _PLNM(Oxidation (M))LLPLL_ ENSG00000168216|ENST00000649934|LMBRD1;nc|ENSG00000168216|Q9NUN5-2|LMBRD1;nc|ENSG00000168216|Q9NUN5-3|LMBRD1;nc|ENSG00000168216|Q9NUN5-4|LMBRD1 32.116972079565 0.1225432171549407 4 [{I|L}P]DMK{I|L} 6 -1 37.502 0.0 0.0 3.6107 0.0 0.0 0.0 338.2085858936728 338.2085858936728 1.566818653688529 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.2614393726401688 0.3807196863200844 [{I|L}P]DMK{I|L} 3.6107 - 446 1 1.51 86673.1 1.0 13382 5114 18493 HBL1_DMSO_200M_050219_2,18498 HBL1_DMSO_200M_050219_2,18498,PLNMLLPLL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18499 99.381 289.0 314780.0 25 0 51519.0 23451 LTGDDKDDLQ 10 119 560.2615392805149 1118.5085256278296 2 560.2623168826103 MULTI CID FTMS 0 0 0 18493 187917.0 0.5748545857875741 -2 0.123321533203125 6 Unmodified _LTGDDKDDLQ_ ENSG00000155313|ENST00000400183|USP25;nc|ENSG00000155313|Q9UHP3-1|USP25;nc|ENSG00000155313|Q9UHP3|USP25 32.78568957990786 0.2337485590374503 4 {I|L}T{[SA]|[TG]}T{I|L}N 7 6 50.481 0.0 0.0 4.5132 0.0 0.0 0.0 415.0748690240844 415.0748690240844 22.477656990787693 0.0 0.0 0.0 0 0.0 2.0 0.75 0.3807196863200844 {I|L}T{[SA]|[TG]}T{I|L}N 4.5132 - 201 + 1 1.51 75746.7 1.0 13383 5114 18493 HBL1_DMSO_200M_050219_2,18499 HBL1_DMSO_200M_050219_2,18499,LTGDDKDDLQ False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18500 99.392 578.0 221830.0 25 0 36701.0 + 38755 TVATEKEFFFV 11 117 659.3397422554604 1316.6649315777206 2 659.3406860232353 MULTI CID FTMS 0 0 0 18493 158458.625 0.7224525118476389 -2 0.123321533203125 7 Unmodified _TVATEKEFFFV_ ENSG00000163568|ENST00000368130|AIM2 59.05245873256422 0.0729907235015292 4 {[TV]|[{I|L}S]}ASAE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}VTV 12 5 + 90.848 0.0 0.0 6.8999 6.8999 81.696 0.0 0.0 0.0 23.53134951058547 7.716525140920609 7.716525140920609 3.252574989159953 0 2.103917193908117 2.0 1.1549471895720984 0.0 {[TV]|[{I|L}S]}ASAE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}VTV;{[TV]|[{I|L}S]}ASEA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}VTV;{[TV]|[{I|L}S]}GTAE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}VTV;{[TV]|[{I|L}S]}GTEA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}VTV;{[TV]|[{I|L}S]}ASAE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}ASAE{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}ETA{M(Oxidation (M))|F}VTV;{[TV]|[{I|L}S]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}TEA{M(Oxidation (M))|F}VTV;{[TV]|[{I|L}S]}ASEA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}ASEA{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V 6.8999;6.6528;6.5904;6.3433;6.3138;6.2566;6.0939;6.0735;6.0668;6.0096 -;-;-;-;-;-;-;-;-;- 12430 1 1.51 96186.5 1.0 13384 5114 18493 HBL1_DMSO_200M_050219_2,18500 HBL1_DMSO_200M_050219_2,18500,TVATEKEFFFV True True TVATEKEFFFV 99.391575 659.340686023235 1992213.25 18493.0 ENSG00000163568|ENST00000368130|AIM2 6.638236204783122 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18501 99.397 291.0 188290.0 25 0 32451.0 + 1862 ALVNELYSL 9 87 511.2824330211779 1020.5503131091558 2 511.2820007205009 MULTI CID FTMS 0 0 0 18493 121574.6484375 0.937437763906638 -1 0.08135986328125 8 Unmodified _ALVNELYSL_ ENSG00000134262|ENST00000369569|AP4B1;ENST00000484201.5_1_1:114440516-114447658:-|nuORF 32.30548876998284 0.1201446275138228 4 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VA{I|L} 6 5 38.065 0.0 0.0 3.7298 0.0 0.0 0.0 378.1680248613621 378.1680248613621 12.148415687162952 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.3494850021680094 0.6549471895720984 {[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}VA{I|L} 3.7298 - 257 1 1.51 46146.4 1.0 13385 5114 18493 HBL1_DMSO_200M_050219_2,18501 HBL1_DMSO_200M_050219_2,18501,ALVNELYSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18502 99.405 462.0 347400.0 25 0 33583.0 + 45860 YYQPLVHLL 9 141 573.3230332894583 1144.6315136457165 2 573.3240234255791 MULTI CID FTMS 0 0 0 18493 125995.2578125 0.6474802603026426 -1 0.08135986328125 9 Unmodified _YYQPLVHLL_ ENSG00000105808|ENST00000262940|RASA4;ENSG00000170667|ENST00000465829|RASA4B;ENST00000427076.5_1_7:43992756-44009363:-|nuORF;ENST00000523568.1_7:102228019-102246337:-|nuORF;nc|ENSG00000105808|O43374-2|RASA4 40.44857923139169 0.0729940656229577 4 YYQP{I|L}VH{I|L}{I|L} 9 0 + 47.449 0.0 0.0 4.1454 4.1454 81.905 0.0 0.0 0.0 8.489982179708058 8.706334813935932 8.489982179708058 21.051446785340552 0 0.6549471895720985 2.0 0.0 0.0 + + YYQP{I|L}VH{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}VT{I|L}E[WK]K;{[QN]|[E{I|L}]|[KN]}VT{I|L}E[WQ]K;[{I|L}T][{I|L}T]QQ[WQ]K;{[QN]|[E{I|L}]|[KN]}VE[{I|L}T][WQ]K;{[QN]|[E{I|L}]|[KN]}VE[{I|L}T][WK]K;{[QN]|[E{I|L}]|[KN]}T{I|L}VE[WQ]K;{[QN]|[E{I|L}]|[KN]}T{I|L}VE[WK]K;{[QN]|[E{I|L}]|[KN]}[WK]Q[WK]K;{[QN]|[E{I|L}]|[KN]}V[KS]Q[WK]K 4.1454;2.3062;2.3062;2.124;2.0321;2.0321;2.007;2.007;1.9013;1.729 +;-;-;-;-;-;-;-;-;- + 1236 + 1 1.51 121942.6 1.0 13386 5114 18493 HBL1_DMSO_200M_050219_2,18502 HBL1_DMSO_200M_050219_2,18502,YYQPLVHLL True True YYQPLVHLL 99.405152 573.324023425579 1555570.0 18493.0 nc|ENSG00000105808|O43374-2|RASA4;;ENST00000523568.1_7:102228019-102246337:-|nuORF;;ENSG00000105808|ENST00000262940|RASA4;;ENST00000427076.5_1_7:43992756-44009363:-|nuORF;;ENSG00000170667|ENST00000465829|RASA4B 5.215879599253337 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18503 99.419 800.0 76455.0 25 0 8373.8 -1 0 79 682.6730620320081 2044.9973566962244 3 682.6733276247978 MULTI CID FTMS 0 0 0 18493 102687.421875 0.624964577072113 2 -0.1338653564453125 10 4 P{I|L}VR{[QN]|[E{I|L}]|[KN]} 6 -1 24.385 0.0 0.0 1.1924 0.0 0.0 1319.553743347903 0.0 1319.553743347903 0.0 10.917600346881498 0.0 0.0 0 0.0 0.0 0.5 0.0 P{I|L}VR{[QN]|[E{I|L}]|[KN]} 1.1924 - 306 + 1 1.51 55185.9 0.4600000083446502 13387 5114 18493 HBL1_DMSO_200M_050219_2,18503 HBL1_DMSO_200M_050219_2,18503, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18505 99.437 800.0 87195.0 25 0 9180.3 + 31101 RLLESLDQLEL 11 85 664.8744933187717 1327.7344337043432 2 664.8758422732353 MULTI CID FTMS 0 0 0 18504 53609.08203125 0.2156370084654486 4 -0.1219635009765625 1 Unmodified _RLLESLDQLEL_ ENSG00000112208|ENST00000370693|BAG2 31.635753872319068 0.3493854641218054 4 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}DQ{I|L}E{I|L} 11 2 + 75.591 0.0 0.0 5.6932 5.6932 83.463 0.0 0.0 0.0 11.038719643217632 16.57577319177794 11.038719643217632 9.128498242811006 0 0.2742275032520141 1.154901959985743 0.6307196863200843 0.0 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}DQ{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}D[AG]{I|L}E{I|L};{[TV]|[{I|L}S]}V[W{I|L}]{I|L}DQ{I|L}E{I|L};{[TV]|[{I|L}S]}V[W{I|L}]{I|L}D[AG]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}][WE]Q{I|L}E{I|L};{[TV]|[{I|L}S]}V[TP]MVVQ{I|L}E{I|L} 5.6932;5.0057;4.8618;4.1743;3.7257;3.2074 -;-;-;-;-;- 268 1 1.521 59010.5 0.6100000143051147 13388 5115 18504 HBL1_DMSO_200M_050219_2,18505 HBL1_DMSO_200M_050219_2,18505,RLLESLDQLEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18506 99.443 340.0 277610.0 25 0 33558.0 + 39341 VAFSQVLTI 9 113 489.2862840615309 976.558015189862 2 489.2868835330009 MULTI CID FTMS 0 0 0 18504 195751.109375 0.1810257297832917 -6 0.4377822875976562 2 Unmodified _VAFSQVLTI_ ENSG00000104976|ENST00000221573|SNAPC2 67.34385681178166 0.0221257235307089 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QAVV 6 6 40.696 0.0 0.0 4.1673 0.0 0.0 0.0 342.2027278604499 342.2027278604499 10.329445402846517 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.110924374808178 0.5941876774005248 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QAVV 4.1673 - 1783 1 1.521 76725.0 1.0 13389 5115 18504 HBL1_DMSO_200M_050219_2,18506 HBL1_DMSO_200M_050219_2,18506,VAFSQVLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18507 99.448 271.0 291880.0 25 0 24893.0 + 10616 RVTIMGIYSI 10 83 576.82587561625 1151.6371982992998 2 576.8260375857353 MULTI CID FTMS 0 0 0 18504 139887.3125 0.9043495160812464 -3 0.190765380859375 3 Unmodified _FVMTAKKQSL_ ENST00000493076.5_1_22:35806581-35817581:+|nuORF;ENSG00000100297|ENST00000216122|MCM5 27.628801355627647 0.3479284626772844 4 {[TV]|[{I|L}S]}[R{I|L}]MG{I|L}YS{I|L} 10 7 + 54.887 0.0 0.0 4.766 4.766 83.439 0.0 0.0 0.0 6.5220444404238975 24.061281911740195 6.5220444404238975 15.228787452803374 0 0.8494850021680094 1.3979400086720375 0.5 0.0 {[TV]|[{I|L}S]}[R{I|L}]MG{I|L}YS{I|L};{[TV]|[{I|L}S]}Y{[TV]|[{I|L}S]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};{[TV]|[{I|L}S]}Y[{I|L}V]T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};[{M(Oxidation (M))|F}V][{I|L}A]RRYD{I|L};{[TV]|[{I|L}S]}Y{[TV]|[{I|L}S]}{I|L}[KT]D{I|L};[R{M(Oxidation (M))|F}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}DAAS{I|L};{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{[TV]|[{I|L}S]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};{[TV]|[{I|L}S]}Y{[TV]|[{I|L}S]}{I|L}D[KT]{I|L};[R{M(Oxidation (M))|F}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L};{[TV]|[{I|L}S]}Y[{I|L}V]T[KT]D{I|L} 4.766;3.4436;3.1822;2.7946;2.7481;2.727;2.7022;2.5952;2.5741;2.4867 -;-;-;-;-;-;-;-;-;- 705 1 1.521 65175.6 1.0 13390 5115 18504 HBL1_DMSO_200M_050219_2,18507 HBL1_DMSO_200M_050219_2,18507,FVMTAKKQSL False False RVTIMGIYSI 99.447858 576.826037585735 1273714.0 18504.0 ENST00000493076.5_1_22:35806581-35817581:+|nuORF;;ENSG00000100297|ENST00000216122|MCM5 3.0776897271474204 2.0 False 10.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18508 99.458 561.0 175110.0 25 0 23326.0 + 30281 QYPENILSF 9 123 555.7768051956598 1109.5390574581195 2 555.7773315310478 MULTI CID FTMS 0 0 0 18504 120823.3125 0.8401450848088157 -6 0.4377822875976562 4 Unmodified _QYPENILSF_ ENSG00000189362|ENST00000409150|NEMP2;nc|ENSG00000189362|A6NFY4-2|NEMP2 42.09456458481378 0.0639583784996157 4 {[TV]|[{I|L}S]}[QP]CC{I|L} 7 7 24.977 0.0 0.0 2.2511 0.0 0.0 0.0 362.16991105180927 362.16991105180927 -2.5130064311803686 0.0 -2.5130064311803686 0.0 0 0.0 0.958607314841775 0.9674165578762486 1.174742501084005 {[TV]|[{I|L}S]}[QP]CC{I|L} 2.2511 - 1028 1 1.521 78053.5 1.0 13391 5115 18504 HBL1_DMSO_200M_050219_2,18508 HBL1_DMSO_200M_050219_2,18508,QYPENILSF True True QYPENILSF 99.457699 555.777331531048 5521587.0 18504.0 nc|ENSG00000189362|A6NFY4-2|NEMP2;;ENSG00000189362|ENST00000409150|NEMP2 5.94913371404012 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18509 99.472 800.0 133940.0 25 0 22475.0 -1 0 119 1108.5050615497405 2214.995570166281 2 1109.008349597454 MULTI CID FTMS 0 0 0 18504 84869.3125 0.6519009761827164 -3 0.190765380859375 5 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NA[NS]Y[Y{M(Oxidation (M))|F}]RW{M(Oxidation (M))|F}{I|L}{I|L}S[YQ] 17 -1 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NA[NS]Y[Y{M(Oxidation (M))|F}]R + + 47.769 11.47 0.91071 2.1566 2.1566 44.701 0.0 0.0 0.0 0.0 11.86497742298718 0.0 0.0 0 0.5 0.0 1.0189301784845295 0.2614393726401688 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NA[NS]Y[Y{M(Oxidation (M))|F}]RW{M(Oxidation (M))|F}{I|L}{I|L}S[YQ] 2.1566 - 2743 + 1 1.521 71193.1 0.4900000095367431 13392 5115 18504 HBL1_DMSO_200M_050219_2,18509 HBL1_DMSO_200M_050219_2,18509, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18510 99.485 800.0 93591.0 25 0 5837.8 -1 0 78 791.3727088192045 2371.096297057813 3 791.7061645388603 MULTI CID FTMS 0 0 0 18504 83690.046875 0.1722434965266142 53 -2.2785568237304688 6 4 [YK]YPPPP 7 -1 32.796 0.0 0.0 1.3832 0.0 0.0 0.0 1525.6442253299997 1525.6442253299997 -2.787501541648332 0.0 -2.787501541648332 0.0 0 0.0 1.154901959985743 0.0 0.7302046884880937 [YK]YPPPP 1.3832 - 3083 1 1.521 63026.9 0.4199999868869781 13393 5115 18504 HBL1_DMSO_200M_050219_2,18510 HBL1_DMSO_200M_050219_2,18510, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18512 99.49 59.0 1196500.0 25 0 160340.0 + 6657 EAWPALQI 8 86 464.2504141008629 926.486275268526 2 464.2505676150322 MULTI CID FTMS 0 0 0 18511 1094070.5 0.8758906324069259 -1 0.0664215087890625 1 Unmodified _EAWPALQI_ ENSG00000158526|ENST00000375151|TSR2 74.39630413441286 0.1057069479668299 4 [PA]WEA 5 5 28.701 0.0 0.0 3.0979 0.0 0.0 0.0 369.2151313206981 369.2151313206981 7.688546281166104 0.0 0.0 0.0 0 0.0 1.154901959985743 0.9247425010840048 0.0 [PA]WEA 3.0979 - 212 1 1.521 59611.0 1.0 13394 5116 18511 HBL1_DMSO_200M_050219_2,18512 HBL1_DMSO_200M_050219_2,18512,EAWPALQI True True EAWPALQI 99.490199 464.250567615032 40340076.0 18511.0 ENSG00000158526|ENST00000375151|TSR2 4.840827147165935 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18513 99.494 225.0 390080.0 25 0 31514.0 -1 0 96 688.0731739034812 2748.2635897475247 4 688.3256713747978 MULTI CID FTMS 0 0 0 18511 309023.5625 0.0950045592562663 11 -0.343780517578125 2 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 58.95 0.0 0.0 2.145 0.0 0.0 0.0 1707.6522365583248 1707.6522365583248 26.77893321190093 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2742275032520141 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.145 - 1244 1 1.521 76014.0 1.0 13395 5116 18511 HBL1_DMSO_200M_050219_2,18513 HBL1_DMSO_200M_050219_2,18513, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18514 99.497 148.0 636020.0 25 0 81218.0 + 34740 SPYPWPLNHI 10 81 612.3143340079008 1222.6141150826015 2 612.3145019412041 MULTI CID FTMS 0 0 0 18511 348226.15625 0.8499394193640654 11 -0.343780517578125 3 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 74.92900055777586 0.0187778523875693 4 [PS]YPW{I|L}PV[HQ] 10 4 + 74.976 0.0 0.0 6.1324 6.1324 74.442 0.0 0.0 0.0 18.81203311264385 1.0720996964786875 1.0720996964786875 1.0720996964786875 0 0.9247425010840048 1.5228787452803376 0.0 1.4124379954164592 [PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PNH{I|L};[PS]YPWP{I|L}V[HQ];[PS]YPWP{I|L}NH{I|L};[PS]Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}HV[HQ];[PS]Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}HNH{I|L};[PS]Y{I|L}[TA]AHV[HQ];[PS]Y{I|L}[TA]AHNH{I|L};[PS]YPW{I|L}[WK]{M(Oxidation (M))|F};[PS]Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}HGGH{I|L} 6.1324;6.0447;5.9884;5.9007;5.2805;5.1928;5.1271;5.0394;4.7255;4.2071 -;-;-;+;-;-;-;-;-;- + 751 + 1 1.521 73088.4 1.0 13396 5116 18511 HBL1_DMSO_200M_050219_2,18514 HBL1_DMSO_200M_050219_2,18514,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18515 99.5 127.0 608280.0 25 0 75075.0 + 25269 MVVDIVQEL 9 111 523.2831876890293 1044.5518224448583 2 523.2841674685478 MULTI CID FTMS 0 0 0 18511 246410.28125 0.1718115971649829 -7 0.5042037963867188 4 Unmodified _MVVDIVQEL_ ENSG00000160209|ENST00000291565|PDXK;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;nc|ENSG00000160209|O00764-3|PDXK 39.957323273325 0.0756908302845263 4 {[QN]|[E{I|L}]|[KN]}AM{I|L}V 6 7 35.054 0.0 0.0 3.3559 0.0 0.0 0.0 385.17225517644687 385.17225517644687 15.290677695685025 0.0 0.0 0.0 0 0.3494850021680094 0.8538719643217619 0.0 0.0 {[QN]|[E{I|L}]|[KN]}AM{I|L}V 3.3559 - 369 1 1.521 64879.6 1.0 13397 5116 18511 HBL1_DMSO_200M_050219_2,18515 HBL1_DMSO_200M_050219_2,18515,MVVDIVQEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18517 99.505 7.2 8889800.0 25 0 1198700.0 + 1821 ALTELLAKI 9 77 486.3103246248441 970.6060963164882 2 486.3107787966728 MULTI CID FTMS 0 0 0 18516 8117255.0 0.3704346403054362 -6 0.3195571899414062 1 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 81.89019881105858 0.0170587746866453 4 [{I|L}A]TE{I|L}{I|L}AK{I|L} 9 0 + 86.476 0.0 0.0 8.9095 8.9095 98.982 0.0 0.0 0.0 65.78849377292904 12.98332479720628 12.98332479720628 86.47608139917317 0 1.610924374808178 2.0 0.0 0.2742275032520141 + + [{I|L}A]TE{I|L}{I|L}AK{I|L} 8.9095 + + 210 + 1 1.521 59320.0 1.0 13398 5117 18516 HBL1_DMSO_200M_050219_2,18517 HBL1_DMSO_200M_050219_2,18517,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18518 99.508 191.0 514270.0 25 0 91737.0 27195 PGGPAGQA 8 103 327.6633756010158 653.3121982688316 2 327.6630737185478 MULTI CID FTMS 0 0 0 18516 426248.78125 0.906685448315026 2 -0.0409011840820312 2 Unmodified _PGGPAGQA_ ENST00000288774.7_1_1:2336406-2336715:-|nuORF 0.0 0.8243325171867699 4 {I|L} 1 8 9.6041 0.0 0.0 1.4701 0.0 0.0 410.1059127237128 127.09949670963124 537.2054094333441 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 1.4701 - 12 + 1 1.521 85140.9 1.0 13399 5117 18516 HBL1_DMSO_200M_050219_2,18518 HBL1_DMSO_200M_050219_2,18518,PGGPAGQA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18520 99.513 109.0 559400.0 25 0 62188.0 + -1 FIVPVCPFS 9 86 533.2765639167626 1064.538574900325 2 533.2780029177666 MULTI CID FTMS 0 0 0 18519 243891.546875 0.2222912301748701 -5 0.238311767578125 1 Carbamidomethyl (C) _FIVPVC(Carbamidomethyl (C))PFS_ REV__ENST00000336023.9_1_12:49521584-49521680:-|nuORF 16.942295170755138 0.3780752226737986 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}R 6 -1 33.097 0.0 0.0 3.109 0.0 0.0 0.0 336.06955896549067 336.06955896549067 3.738350322034236 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}R 3.109 - 160 + 1 1.521 56808.3 1.0 13400 5118 18519 HBL1_DMSO_200M_050219_2,18520 HBL1_DMSO_200M_050219_2,18520,FIVPVCPFS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18521 99.528 800.0 291130.0 25 0 29994.0 + 35613 STYKFFEVI 9 126 1133.5873920467611 1132.5801155801612 1 1133.586108386517 MULTI CID FTMS 0 0 0 18519 110751.53125 0.3721129359745707 5 -0.199005126953125 2 Unmodified _STYKFFEVI_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 59.36838082759317 0.0264317782606298 4 [YK]TS{M(Oxidation (M))|F}{M(Oxidation (M))|F}EV{I|L} 9 4 + 73.51 0.0 0.0 6.4905 6.4905 85.239 0.0 0.0 0.0 10.202264589233394 34.8994670804995 10.202264589233394 7.5 0 0.3054621874040891 0.0 1.8807196863200843 0.3054621874040891 [YK]TS{M(Oxidation (M))|F}{M(Oxidation (M))|F}EV{I|L};[YK]TS{M(Oxidation (M))|F}E{M(Oxidation (M))|F}V{I|L};[YK]T{M(Oxidation (M))|F}S{M(Oxidation (M))|F}EV{I|L};[YK]{M(Oxidation (M))|F}TS{M(Oxidation (M))|F}EV{I|L};[YK]TS{M(Oxidation (M))|F}EV{M(Oxidation (M))|F}{I|L};[YK]TS{M(Oxidation (M))|F}VE{M(Oxidation (M))|F}{I|L};[YK]T{M(Oxidation (M))|F}SE{M(Oxidation (M))|F}V{I|L};[YK]{M(Oxidation (M))|F}TSE{M(Oxidation (M))|F}V{I|L};[{M(Oxidation (M))|F}E]G[RH]{M(Oxidation (M))|F}EV{I|L};[YK]TSV{M(Oxidation (M))|F}E{M(Oxidation (M))|F}{I|L} 6.4905;5.8283;5.4257;5.3362;4.9217;4.8518;4.7635;4.674;4.0331;3.8985 -;-;-;-;-;-;-;-;-;- 4060 1 1.521 149402.5 0.5099999904632568 13401 5118 18519 HBL1_DMSO_200M_050219_2,18521 HBL1_DMSO_200M_050219_2,18521,STYKFFEVI True True STYKFFEVI 99.527509 1133.58610838652 201964817.25 18519.0 ENST00000490223.1_1_3:23959920-23960989:+|nuORF;;ENSG00000174748|ENST00000307839|RPL15;;ENST00000436146.1_1_3:23959450-23960989:+|nuORF 6.601292610168457 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18522 99.541 777.0 156760.0 25 0 15334.0 + 10254 FQTDLIYNL 9 154 563.792097986971 1125.569643040742 2 563.7920410037041 MULTI CID FTMS 0 0 0 18519 95393.1953125 0.8752097113692054 -4 0.156951904296875 3 Unmodified _FQTDLIYNL_ ENSG00000113441|ENST00000231368|LNPEP;nc|ENSG00000113441|Q9UIQ6-2|LNPEP;nc|ENSG00000113441|Q9UIQ6-3|LNPEP 62.57269311338072 0.0246576765497938 4 {NN|[MP]|[D{I|L}]|[EV]}TQ{M(Oxidation (M))|F}{I|L} 6 6 47.541 0.0 0.0 4.2237 0.0 0.0 0.0 405.1768998264127 405.1768998264127 23.327731244245346 0.0 0.0 0.0 0 0.3054621874040891 0.8239087409443188 0.8609243748081782 0.6747425010840047 {NN|[MP]|[D{I|L}]|[EV]}TQ{M(Oxidation (M))|F}{I|L} 4.2237 - 1234 1 1.521 94730.6 1.0 13402 5118 18519 HBL1_DMSO_200M_050219_2,18522 HBL1_DMSO_200M_050219_2,18522,FQTDLIYNL True True FQTDLIYNL 99.540964 563.792041003704 838333.4375 18519.0 nc|ENSG00000113441|Q9UIQ6-2|LNPEP;;nc|ENSG00000113441|Q9UIQ6-3|LNPEP;;ENSG00000113441|ENST00000231368|LNPEP 3.300065279006958 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18524 99.546 57.0 1452300.0 25 0 185500.0 + 21629 LPLAHVLEL 9 91 502.8104594408647 1003.6063659485294 2 502.8107482790947 MULTI CID FTMS 0 0 0 18523 1033551.1875 0.7965601922285471 -2 0.0409011840820312 1 Unmodified _LPLAHVLEL_ ENSG00000068366|ENST00000672401|ACSL4;ENSG00000123983|ENST00000357430|ACSL3;nc|ENSG00000068366|O60488|ACSL4 101.72198241140316 0.010086100337927 4 [{I|L}P]AHV{I|L}E{I|L}{I|L} 9 2 + 68.355 0.0 0.0 6.811 6.811 75.447 0.0 0.0 0.0 7.873242544918938 36.48325926497117 7.873242544918938 0.2680249241196719 0 0.805462187404089 2.0 0.0 0.0 [{I|L}P]AHV{I|L}E{I|L}{I|L};[{I|L}P]AHV{I|L}{I|L}E{I|L};[{I|L}P]{I|L}AHVE{I|L}{I|L};[{I|L}P]{I|L}AHV{I|L}E{I|L};[{I|L}P]AH{I|L}VE{I|L}{I|L};[{I|L}P]AH{I|L}V{I|L}E{I|L};[{I|L}P]A{I|L}HVE{I|L}{I|L};[{I|L}P]A{I|L}HV{I|L}E{I|L};[{I|L}P]{I|L}{[HG]|PP}{I|L}E{I|L}{I|L};[{I|L}P]{I|L}{[HG]|PP}{I|L}{I|L}E{I|L} 6.811;6.7843;6.7259;6.6992;6.511;6.4843;6.1939;6.1672;5.7746;5.7478 -;-;-;+;-;-;-;-;-;- + 817 1 1.521 69818.2 1.0 13403 5119 18523 HBL1_DMSO_200M_050219_2,18524 HBL1_DMSO_200M_050219_2,18524,LPLAHVLEL True True LPLAHVLEL 99.545736 502.810748279095 52634826.0 18523.0 ENSG00000068366|ENST00000672401|ACSL4;;ENSG00000123983|ENST00000357430|ACSL3;;nc|ENSG00000068366|O60488|ACSL4 4.356565078099568 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18525 99.547 60.0 1061200.0 25 0 84620.0 + 37645 TLLRLLYEA 9 85 546.3266554999701 1090.63875806674 2 546.3269531130791 MULTI CID FTMS 0 0 0 18523 692300.5 0.7790461165034888 1 -0.0389480590820312 2 Unmodified _TLLRLLYEA_ ENSG00000149100|ENST00000531120|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF;nc|ENSG00000149100|Q7L2H7-2|EIF3M 37.07464296494664 0.0915153923251136 4 [{I|L}T]{I|L}R{I|L}{I|L}YEA 9 0 + 64.957 0.0 0.0 5.9559 5.9559 80.356 0.0 0.0 0.0 22.24301211992909 52.104093769761874 22.24301211992909 4.771212547196626 0 1.2104093769761877 2.0 0.0 0.0 + + [{I|L}T]{I|L}R{I|L}{I|L}YEA;[{I|L}T]{I|L}R{I|L}Y{I|L}EA;{I|L}{I|L}[R{I|L}]T{I|L}YEA;{I|L}{I|L}[R{I|L}]TY{I|L}EA 5.9559;5.5184;3.5546;3.1171 +;-;-;- + 160 1 1.521 52972.3 1.0 13404 5119 18523 HBL1_DMSO_200M_050219_2,18525 HBL1_DMSO_200M_050219_2,18525,TLLRLLYEA True True TLLRLLYEA 99.547232 546.326953113079 13596809.0 18523.0 nc|ENSG00000149100|Q7L2H7-2|EIF3M;;ENSG00000149100|ENST00000531120|EIF3M;;ENST00000524711.5_1_11:32608681-32615496:+|nuORF 6.284464518229167 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18526 99.548 34.0 1252900.0 25 0 161020.0 + 35611 STYKFFEVI 9 66 567.2977130476181 1132.580873162036 2 567.2979003787041 MULTI CID FTMS 0 0 0 18523 1445601.625 0.2574267654085488 6 -0.2139053344726562 3 Unmodified _STYKFFEVI_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 41.8396318013385 0.0653578398400075 4 [YK]{[MG]|[TS]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[{I|L}V] 9 4 + 39.995 0.0 0.0 3.5314 3.5314 68.218 0.0 0.0 0.0 3.0102999566398125 7.147642715192511 3.0102999566398125 3.0102999566398125 0 0.5 0.0 1.1861818737241734 0.0 [YK]{[MG]|[TS]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[{I|L}V];{[MG]|[TS]}[YK]{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[{I|L}V];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKY{[MG]|[TS]}[{I|L}V];[YK]{[MG]|[TS]}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}[{I|L}V];[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}KY{[MG]|[TS]}[{I|L}V];{[MG]|[TS]}[YK]{M(Oxidation (M))|F}E{M(Oxidation (M))|F}[{I|L}V];[YK]{[MG]|[TS]}E{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{I|L}V];[HA]{[QS]|[NT]}KY{[MG]|[TS]}[{I|L}V];{[MG]|[TS]}[YK]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{I|L}V];[YK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[MG]|[TS]}[{I|L}V] 3.5314;3.2656;2.8591;2.7739;2.5933;2.5081;2.0165;1.7802;1.7507;1.7351 -;+;-;-;-;-;-;-;-;- + 345 1 1.521 39150.1 1.0 13405 5119 18523 HBL1_DMSO_200M_050219_2,18526 HBL1_DMSO_200M_050219_2,18526,STYKFFEVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18527 99.552 200.0 326130.0 25 0 30453.0 + -1 LPPCILTRT 9 82 535.8057363247569 1069.5969197163138 2 536.3033325076103 MULTI CID FTMS 0 0 0 18523 224483.0 0.6340686786160826 14 -0.5022048950195312 4 Carbamidomethyl (C) _LPPC(Carbamidomethyl (C))ILTRT_ REV__ENST00000536140.5_1_12:6939022-6940400:+|nuORF 9.347437153973935 0.588369872918737 4 [{I|L}P]P{[WS]|[C(Carbamidomethyl (C)){I|L}]}PP 7 -1 23.945 0.0 0.0 2.2387 0.0 0.0 0.0 292.15744772435454 292.15744772435454 8.460244700585022 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}P]P{[WS]|[C(Carbamidomethyl (C)){I|L}]}PP 2.2387 - 161 1 1.521 58269.2 1.0 13406 5119 18523 HBL1_DMSO_200M_050219_2,18527 HBL1_DMSO_200M_050219_2,18527,LPPCILTRT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18528 99.566 800.0 251920.0 25 0 12282.0 + 14688 IITDFDMTL 9 111 1068.5283275266886 1067.521051060089 1 1068.528247058392 MULTI CID FTMS 0 0 0 18523 104178.2734375 0.3047173258841903 -4 0.1219635009765625 5 Unmodified _IITDFDMTL_ ENSG00000122643|ENST00000610140|NT5C3A;ENST00000441170.1_1_4:118496697-118497264:-|nuORF;ENST00000461851.1_1_7:33061643-33066527:-|nuORF;ENST00000464840.5_1_7:33063600-33075596:-|nuORF;nc|ENSG00000122643|Q9H0P0-1|NT5C3A;nc|ENSG00000122643|Q9H0P0-2|NT5C3A;nc|ENSG00000122643|Q9H0P0-3|NT5C3A;nc|ENSG00000122643|Q9H0P0|NT5C3A 162.95088124538222 0.0007106222868585 4 {I|L}{I|L}TD{M(Oxidation (M))|F}DMT{I|L} 9 0 + 86.49 0.0 0.0 8.1019 8.1019 89.591 0.0 0.0 0.0 17.50869542769378 7.380770024155325 7.380770024155325 7.380770024155325 0 1.133803120088516 1.5228787452803376 1.9110892374447828 0.0 + + {I|L}{I|L}TD{M(Oxidation (M))|F}DMT{I|L};{I|L}{I|L}TD{M(Oxidation (M))|F}DM{I|L}T;{[{M(Oxidation (M))|F}D]|MM}DT{I|L}{I|L}MT{I|L};{[{M(Oxidation (M))|F}D]|MM}DTM{I|L}{I|L}T{I|L};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}D{I|L}{I|L}MT{I|L};{[{M(Oxidation (M))|F}D]|MM}TD{I|L}{I|L}MT{I|L};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}DM{I|L}{I|L}T{I|L};{[{M(Oxidation (M))|F}D]|MM}DTM{I|L}T{I|L}{I|L};{[{M(Oxidation (M))|F}D]|MM}DT{I|L}M{I|L}T{I|L};{[{M(Oxidation (M))|F}D]|MM}DTMT{I|L}{I|L}{I|L} 8.1019;7.4105;6.4618;6.2462;6.1798;6.0149;5.9642;5.9361;5.9164;5.8123 +;-;-;-;-;-;-;-;-;- + 11858 1 1.521 128033.8 0.5299999713897705 13407 5119 18523 HBL1_DMSO_200M_050219_2,18528 HBL1_DMSO_200M_050219_2,18528,IITDFDMTL True True IITDFDMTL 99.566113 1068.52824705839 3096438.25 18523.0 ENST00000441170.1_1_4:118496697-118497264:-|nuORF;;nc|ENSG00000122643|Q9H0P0|NT5C3A;;nc|ENSG00000122643|Q9H0P0-1|NT5C3A;;nc|ENSG00000122643|Q9H0P0-2|NT5C3A;;ENST00000464840.5_1_7:33063600-33075596:-|nuORF;;ENSG00000122643|ENST00000610140|NT5C3A;;ENST00000461851.1_1_7:33061643-33066527:-|nuORF;;nc|ENSG00000122643|Q9H0P0-3|NT5C3A 3.991569439570109 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18529 99.58 800.0 149020.0 25 0 19754.0 + 45117 YPYVAVML 8 118 478.2512426217275 954.487932310255 2 478.2515441775322 MULTI CID FTMS 0 0 0 18523 98498.171875 1.0 0 0.0 6 Unmodified _YPYVAVML_ ENSG00000188243|ENST00000682242|COMMD6;ENST00000477377.1_1_13:76104099-76111947:-|nuORF;nc|ENSG00000188243|Q7Z4G1-2|COMMD6 41.81723621529253 0.2038889569391319 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAVYM{I|L} 8 2 + 58.065 0.0 0.0 6.0833 6.0833 57.023 0.0 0.0 0.0 2.939002879805201 2.939002879805201 2.939002879805201 0.0 0 0.7429928190999391 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAVYM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAYVM{I|L};[YV]VYAPM{I|L};[YV]YVAPM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VYAVM{I|L};[YV]VAYPM{I|L};[YV]VYPAM{I|L};[YV]YVPAM{I|L};[YV]PAVYM{I|L};[YV]PAYVM{I|L} 6.0833;6.0833;5.7754;5.7754;5.2681;4.9602;4.89;4.89;4.7752;4.7752 -;-;-;-;-;-;-;-;-;- 616 1 1.521 96735.0 0.4099999964237213 13408 5119 18523 HBL1_DMSO_200M_050219_2,18529 HBL1_DMSO_200M_050219_2,18529,YPYVAVML False True YPYVAVML 99.579928 478.251544177532 1108502.875 18523.0 ENST00000477377.1_1_13:76104099-76111947:-|nuORF;;ENSG00000188243|ENST00000682242|COMMD6;;nc|ENSG00000188243|Q7Z4G1-2|COMMD6 1.7890572945276897 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18531 99.585 72.0 1224200.0 25 0 133860.0 + 24129 LYPLALKTL 9 89 516.3289728066453 1030.6433926800903 2 516.3304321169853 MULTI CID FTMS 0 0 0 18530 445024.21875 0.7457407116869853 4 -0.1616287231445312 1 Unmodified _LYPLALKTL_ REV__ENSG00000087076|ENST00000263278|HSD17B14 37.97399986684836 0.0865783450051559 4 Y{I|L}AP{I|L}{I|L}KT{I|L} 9 -1 + 83.589 0.0 0.0 8.1104 8.1104 88.661 0.0 0.0 0.0 43.84882004829215 14.092568545288074 14.092568545288074 6.422042885466098 0 0.9749073637206092 2.0 0.6549471895720985 0.0 Y{I|L}AP{I|L}{I|L}KT{I|L};Y{I|L}AP{I|L}{I|L}TK{I|L} 8.1104;7.4872 -;- 501 + 1 1.521 72023.1 1.0 13409 5120 18530 HBL1_DMSO_200M_050219_2,18531 HBL1_DMSO_200M_050219_2,18531,LYPLALKTL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18532 99.596 662.0 135980.0 25 0 10643.0 + 27425 PIPTSEPPLLE 11 120 596.8265677387212 1191.6385825442424 2 596.8262817263603 MULTI CID FTMS 0 0 0 18530 108068.9296875 0.7240349061207877 5 -0.174957275390625 2 Unmodified _PIPTSEPPLLE_ REV__ENSG00000114867|ENST00000346169|EIF4G1;REV__ENST00000442406.5_1_3:184038690-184052693:+|nuORF;REV__nc|ENSG00000114867|Q04637-3|EIF4G1;REV__nc|ENSG00000114867|Q04637-4|EIF4G1;REV__nc|ENSG00000114867|Q04637-5|EIF4G1;REV__nc|ENSG00000114867|Q04637-6|EIF4G1;REV__nc|ENSG00000114867|Q04637-7|EIF4G1;REV__nc|ENSG00000114867|Q04637-8|EIF4G1;REV__nc|ENSG00000114867|Q04637-9|EIF4G1 17.11289562659939 0.6791789249425932 4 {[QN]|[E{I|L}]|[KN]}PDPP{I|L}E 8 -1 43.928 0.0 0.0 3.6864 0.0 0.0 0.0 298.1792068941049 298.1792068941049 24.295810205713675 0.0 0.0 0.0 0 0.5 0.744727494896694 0.2887254899964357 0.0 {[QN]|[E{I|L}]|[KN]}PDPP{I|L}E 3.6864 - 999 1 1.521 71067.0 1.0 13410 5120 18530 HBL1_DMSO_200M_050219_2,18532 HBL1_DMSO_200M_050219_2,18532,PIPTSEPPLLE False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18534 99.605 298.0 331210.0 25 0 50835.0 + 16487 KALDLSLYL 9 113 518.3074092269677 1034.600265520735 2 518.3085815310478 MULTI CID FTMS 0 0 0 18533 186620.21875 1.0 0 0.0 1 Unmodified _KALDLSLYL_ ENSG00000164307|ENST00000443439|ERAP1;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;nc|ENSG00000164307|Q9NZ08-2|ERAP1 53.832793166522166 0.0319663582346103 4 {NN|[MP]|[D{I|L}]|[EV]}AK{I|L}S{I|L}Y{I|L} 9 4 + 69.409 0.0 0.0 6.7088 6.7088 86.53 0.0 0.0 0.0 8.170693164140133 16.478174818886373 8.170693164140133 8.170693164140133 0 0.805462187404089 1.0969100130080565 1.174742501084005 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}AK{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}KS{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}AK{I|L}Y{[TV]|[{I|L}S]}{I|L};{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Y{[TV]|[{I|L}S]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}KY{[TV]|[{I|L}S]}{I|L} 6.7088;5.919;5.5172;3.2802;2.4904;2.0886 -;-;-;-;-;- 215 1 1.519 81026.7 1.0 13411 5121 18533 HBL1_DMSO_200M_050219_2,18534 HBL1_DMSO_200M_050219_2,18534,KALDLSLYL True True KALDLSLYL 99.605415 518.3091 1228099.125 18533.0 nc|ENSG00000164307|Q9NZ08-2|ERAP1;;ERAP1|p.I827*|1|0.35|ENSG00000164307|chr5:96781167-96781167|T/-|frameshift_variant;;ENSG00000164307|ENST00000443439|ERAP1 3.652079820632935 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18535 99.607 69.0 1106900.0 25 0 136760.0 + 24182 LYYLVFTL 8 89 516.2926314963414 1030.5707100594827 2 516.2936889529228 MULTI CID FTMS 0 0 0 18533 553825.1875 1.0 0 0.0 2 Unmodified _LYYLVFTL_ ENSG00000007541|ENST00000321878|PIGQ;ENST00000480424.6_1_16:629069-630269:+|nuORF;nc|ENSG00000007541|Q9BRB3|PIGQ 30.19836241096484 0.408853459428176 4 [Y{I|L}]Y{M(Oxidation (M))|F}{I|L} 5 3 37.703 0.0 0.0 3.6585 0.0 0.0 0.0 328.1888686928316 328.1888686928316 -4.090475125574855 0.0 -4.090475125574855 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}]Y{M(Oxidation (M))|F}{I|L} 3.6585 - 251 1 1.519 60776.9 1.0 13412 5121 18533 HBL1_DMSO_200M_050219_2,18535 HBL1_DMSO_200M_050219_2,18535,LYYLVFTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18536 99.611 183.0 408890.0 25 0 86810.0 + 2228 AQDEHLITFF 10 74 610.8009002042369 1219.5872474752737 2 610.8011352419853 MULTI CID FTMS 0 0 0 18533 349581.625 1.0 0 0.0 3 Unmodified _AQDEHLITFF_ ENSG00000144028|ENST00000323853|SNRNP200 38.61474834105838 0.1721950110283317 4 {[YC]|[HE]}D{I|L}[QA]{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F} 10 5 + 54.654 0.0 0.0 4.4813 4.4813 50.467 0.0 0.0 0.0 0.2802872360024366 33.40620618687794 0.2802872360024366 0.0 0 0.9247425010840048 0.0 1.0 0.0 {[YC]|[HE]}D{I|L}[QA]{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D[QA]{I|L}{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D[QA]{I|L}T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D{I|L}[QA]T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D{I|L}{I|L}[QA]T{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D{I|L}RRT{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[YC]|[HE]}D{I|L}{I|L}T[QA]{M(Oxidation (M))|F}{M(Oxidation (M))|F};[QA][{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]{I|L}T{M(Oxidation (M))|F}{M(Oxidation (M))|F};[QA][{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]T{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};[NP]T{I|L}EQQP{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4.4813;4.4813;4.2345;4.2345;4.0901;3.9457;3.9086;3.063;2.8162;2.6567 -;-;-;-;-;-;-;-;-;- 812 1 1.519 58683.4 1.0 13413 5121 18533 HBL1_DMSO_200M_050219_2,18536 HBL1_DMSO_200M_050219_2,18536,AQDEHLITFF False True AQDEHLITFF 99.610609 610.801135241985 3334402.5 18533.0 ENSG00000144028|ENST00000323853|SNRNP200 6.951404412587483 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18537 99.624 800.0 218090.0 25 0 15888.0 + 18364 KVPEELVFASL 11 137 616.3499824807757 1230.6854120283513 2 616.3489257693291 MULTI CID FTMS 0 0 0 18533 144163.171875 0.3347841522403009 -6 0.177093505859375 4 Unmodified _KVPEELVFASL_ ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D 97.74103586103692 0.0003961982456404 4 [EP]E{I|L}VKV{M(Oxidation (M))|F}AS{I|L} 11 4 + 103.75 0.0 0.0 8.4304 8.4304 88.759 0.0 0.0 0.0 10.0 14.190166918179614 10.0 6.020599913279625 0 1.4916440611282624 0.8239087409443188 1.2346368802282015 0.7059771852360797 [EP]E{I|L}VKV{M(Oxidation (M))|F}AS{I|L};[EP]E{I|L}VVK{M(Oxidation (M))|F}AS{I|L};{[TV]|[{I|L}S]}[HM]VKV{M(Oxidation (M))|F}AS{I|L};{[TV]|[{I|L}S]}[HM]VVK{M(Oxidation (M))|F}AS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HS]VKV{M(Oxidation (M))|F}AS{I|L};[{I|L}P]EEVKV{M(Oxidation (M))|F}AS{I|L};{[QN]|[E{I|L}]|[KN]}[EP]VKV{M(Oxidation (M))|F}AS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[EP]KV{M(Oxidation (M))|F}AS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HS]VVK{M(Oxidation (M))|F}AS{I|L};[{I|L}P]EEVVK{M(Oxidation (M))|F}AS{I|L} 8.4304;7.9412;7.6178;7.1286;6.769;6.6487;6.4004;6.3389;6.2798;6.1595 -;-;-;-;-;-;-;-;-;- 2111 1 1.519 129869.4 0.5600000023841858 13414 5121 18533 HBL1_DMSO_200M_050219_2,18537 HBL1_DMSO_200M_050219_2,18537,KVPEELVFASL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18538 99.632 449.0 195920.0 25 0 20671.0 + 21104 LPALFRDI 8 76 472.781783164464 943.549013395728 2 472.7815734744072 MULTI CID FTMS 0 0 0 18533 136527.046875 0.8316524800101728 -6 0.177093505859375 5 Unmodified _LPALFRDI_ ENSG00000141456|ENST00000572293|PELP1 29.081581746732265 0.4323690340403521 4 {I|L}PA{I|L}{M(Oxidation (M))|F}[RD]{I|L} 8 0 + 65.182 0.0 0.0 6.9082 6.9082 87.218 0.0 0.0 0.0 52.96388461952553 3.0102999566398125 3.0102999566398125 8.010299956639813 0 0.8807196863200843 1.5228787452803376 0.0 0.0 + + {I|L}PA{I|L}{M(Oxidation (M))|F}[RD]{I|L};{I|L}P{I|L}A{M(Oxidation (M))|F}[RD]{I|L};{I|L}{I|L}PA{M(Oxidation (M))|F}[RD]{I|L} 6.9082;6.0593;4.0931 +;-;- + 153 + 1 1.519 74300.9 1.0 13415 5121 18533 HBL1_DMSO_200M_050219_2,18538 HBL1_DMSO_200M_050219_2,18538,LPALFRDI False True LPALFRDI 99.632403 472.781573474407 11539640.25 18533.0 ENSG00000141456|ENST00000572293|PELP1 2.9122562408447266 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18540 99.637 49.0 1459900.0 25 0 120080.0 + 5663 DPFIIIHSI 9 93 527.8005311317575 0 527.8002807497978 PEAK CID FTMS 0 0 0 18539 730171.875 0.9318993013517176 1 -0.0752182006835937 1 Unmodified _DPFIIIHSI_ ENSG00000120526|ENST00000239690|NUDCD1;ENST00000519607.5_1_8:110255240-110326067:-|nuORF;nc|ENSG00000120526|Q96RS6-2|NUDCD1;nc|ENSG00000120526|Q96RS6-3|NUDCD1 88.90359156742426 0.0131206826922917 4 {M(Oxidation (M))|F}{I|L}{I|L}[RK]T 6 6 39.742 0.0 0.0 3.7721 0.0 0.0 212.0787711484773 80.0149401300414 292.0937112785187 0.0 0.0 0.0 0.0 0 1.2302046884880935 0.0 1.5044321917401078 0.0 {M(Oxidation (M))|F}{I|L}{I|L}[RK]T 3.7721 - 168 + 1 1.519 64454.9 1.0 13416 5122 18539 HBL1_DMSO_200M_050219_2,18540 HBL1_DMSO_200M_050219_2,18540,DPFIIIHSI True True DPFIIIHSI 99.637071 527.800280749798 8922033.0 18539.0 ENST00000519607.5_1_8:110255240-110326067:-|nuORF;;nc|ENSG00000120526|Q96RS6-2|NUDCD1;;nc|ENSG00000120526|Q96RS6-3|NUDCD1;;ENSG00000120526|ENST00000239690|NUDCD1 5.358973264694214 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18541 99.641 198.0 335930.0 25 0 38534.0 -1 0 70 917.0955245022128 2748.264744106838 3 917.7656127810478 MULTI CID FTMS 0 0 0 18539 343043.59375 0.0901774103800067 16 -0.7968215942382812 2 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 55.812 0.0 0.0 2.0308 0.0 0.0 0.0 1707.649003873402 1707.649003873402 28.54425638516595 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.0308 - 152 1 1.519 52401.2 1.0 13417 5122 18539 HBL1_DMSO_200M_050219_2,18541 HBL1_DMSO_200M_050219_2,18541, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18542 99.643 78.0 708870.0 25 0 68353.0 + 42895 VVPDWLHDI 9 81 547.2870926637855 1092.559632394371 2 547.2878295779228 MULTI CID FTMS 0 0 0 18539 542744.9375 1.0 0 0.0 3 Unmodified _VVPDWLHDI_ ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF 32.30548876998284 0.1201446275138228 4 VVPDW{I|L}HD{I|L} 9 0 + 59.176 0.0 0.0 5.4163 5.4163 87.826 0.0 0.0 0.0 24.56164168289252 8.833591317498097 8.833591317498097 32.077579798277284 0 0.4247425010840047 2.0 0.3494850021680094 0.0 + + VVPDW{I|L}HD{I|L};VV{I|L}{[ET]|[MV]}{[WT]|[RM]}[{M(Oxidation (M))|F}V];VVP[{M(Oxidation (M))|F}V]{[WT]|[RM]}[{M(Oxidation (M))|F}V];VV[{M(Oxidation (M))|F}V]P{[WT]|[RM]}[{M(Oxidation (M))|F}V] 5.4163;2.4803;2.1838;2.1838 +;-;-;- + 236 + 1 1.519 50550.0 1.0 13418 5122 18539 HBL1_DMSO_200M_050219_2,18542 HBL1_DMSO_200M_050219_2,18542,VVPDWLHDI True True VVPDWLHDI 99.642692 547.287829577923 9663683.0 18539.0 ENSG00000021776|ENST00000156471|AQR;;ENST00000543879.6_1_15:35166876-35196659:-|nuORF 6.364002068837483 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18543 99.651 449.0 189200.0 25 0 31340.0 + 29965 QSSGEEELQL 10 115 560.2615392805149 1118.5085256278296 2 560.2621337771416 MULTI CID FTMS 0 0 0 18539 174438.671875 0.5336231978269006 6 -0.2213516235351562 4 Unmodified _QSSGEEELQL_ ENSG00000063245|ENST00000270460|EPN1;nc|ENSG00000063245|Q9Y6I3-1|EPN1;nc|ENSG00000063245|Q9Y6I3-3|EPN1 31.26834338654808 0.266153677697784 4 {I|L}Y{I|L}V 4 9 38.928 0.0 0.0 3.4803 0.0 0.0 0.0 627.1544893854124 627.1544893854124 9.784700126913393 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {I|L}Y{I|L}V 3.4803 - 371 + 1 1.519 70731.1 1.0 13419 5122 18539 HBL1_DMSO_200M_050219_2,18543 HBL1_DMSO_200M_050219_2,18543,QSSGEEELQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18544 99.662 635.0 144600.0 25 0 12130.0 + 21782 LPNCYQDI 8 117 483.2240647845241 964.433576635848 2 483.2244140505791 MULTI CID FTMS 0 0 0 18539 163813.953125 0.4412906770721221 3 -0.1225738525390625 5 Unmodified _LPNCYQDI_ REV__ENSG00000135108|ENST00000622495|FBXO21;REV__ENST00000549689.5_1_12:117612134-117624310:-|nuORF;REV__nc|ENSG00000135108|O94952|FBXO21 14.581692164780916 0.6954967302934248 4 [{I|L}P]{I|L}C(Carbamidomethyl (C)) 4 -1 25.406 0.0 0.0 2.6343 0.0 0.0 0.0 478.1618230560232 478.1618230560232 4.436974992327123 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}P]{I|L}C(Carbamidomethyl (C)) 2.6343 - 64 1 1.519 75283.0 1.0 13420 5122 18539 HBL1_DMSO_200M_050219_2,18544 HBL1_DMSO_200M_050219_2,18544,LPNCYQDI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18545 99.668 359.0 172630.0 25 0 18263.0 + 41997 VQPLELPMV 9 91 513.2881398188918 1024.5617267045834 2 513.2887451052666 MULTI CID FTMS 0 0 0 18539 130834.109375 0.7160544935901388 -2 0.0523834228515625 6 Unmodified _VQPLELPMV_ ENSG00000068079|ENST00000415816|IFI35;ENST00000246911.6_1_17:41158964-41165399:+|nuORF;nc|ENSG00000068079|P80217-2|IFI35 39.957323273325 0.0756908302845263 4 [{I|L}P]E{I|L}N{I|L} 6 5 48.945 0.0 0.0 4.7771 0.0 0.0 0.0 342.1488915714245 342.1488915714245 34.34070099586343 0.0 0.0 0.0 0 0.7742275032520141 1.154901959985743 0.0 0.4247425010840047 [{I|L}P]E{I|L}N{I|L} 4.7771 - 261 1 1.519 58117.2 1.0 13421 5122 18539 HBL1_DMSO_200M_050219_2,18545 HBL1_DMSO_200M_050219_2,18545,VQPLELPMV True True VQPLELPMV 99.668217 513.288745105267 1736580.625 18539.0 ENSG00000068079|ENST00000415816|IFI35;;nc|ENSG00000068079|P80217-2|IFI35;;ENST00000246911.6_1_17:41158964-41165399:+|nuORF 5.88347593943278 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18546 99.674 291.0 344790.0 25 0 28713.0 + 20608 LLPHYPNWF 9 119 593.8056971687428 1185.5968414042854 2 593.8055908083916 MULTI CID FTMS 0 0 0 18539 124059.6640625 0.247130051084879 -8 0.2807388305664062 7 Unmodified _LLPHYPNWF_ ENSG00000159596|ENST00000372025|TMEM69 74.39630413441286 0.0193995060682538 4 {[WN]|[YH]}P{I|L}{I|L}[NP]W{M(Oxidation (M))|F} 9 4 + 44.405 0.0 0.0 3.7454 3.7454 78.936 0.0 0.0 0.0 13.46787486224656 9.365677915492512 9.365677915492512 12.28347485907939 0 0.968765315847925 1.0457574905606752 0.0 0.2887254899964357 {[WN]|[YH]}P{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}P[NP]W{I|L}{I|L}{M(Oxidation (M))|F};[NP]W{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}P[NP]{I|L}{I|L}W{M(Oxidation (M))|F};{[WN]|[YH]}[YV][MT]{I|L}{I|L}{M(Oxidation (M))|F};[NP]W[NP]W{I|L}{I|L}{M(Oxidation (M))|F};{[WN]|[YH]}P[VP][Q{I|L}]W{M(Oxidation (M))|F};{[WN]|[YH]}P[VP][WQ]{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Y{I|L}]{I|L}[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}[RH][NS]{I|L}{I|L}{M(Oxidation (M))|F} 3.7454;2.7093;2.6094;1.8056;1.8034;1.5734;1.5517;1.0235;0.88975;0.88427 -;-;-;-;-;-;-;-;-;- 191 1 1.519 83231.2 1.0 13422 5122 18539 HBL1_DMSO_200M_050219_2,18546 HBL1_DMSO_200M_050219_2,18546,LLPHYPNWF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18547 99.687 800.0 189560.0 25 0 45717.0 + 14964 ILPALSGVI 9 90 882.566027371582 881.5587509049819 1 882.5672485232353 MULTI CID FTMS 0 0 0 18539 105484.6328125 0.4457194760316604 -11 0.4517898559570312 8 Unmodified _ILPALSGVI_ ENST00000422223.6_1_9:14869174-14869228:-|nuORF 70.71552829651908 0.0208223590022201 4 [{I|L}P]VTAGV{I|L}{I|L} 9 5 + 71.019 0.0 0.0 8.056 8.056 80.894 0.0 0.0 0.0 9.208187539523742 12.224425847341417 9.208187539523742 1.4275289407803768 0 0.0 1.5228787452803376 1.7196100389531246 0.0 [{I|L}P]VTAGV{I|L}{I|L};[{I|L}P]VTA{I|L}GV{I|L};[{I|L}P]VTAG{I|L}V{I|L};[{I|L}P]{I|L}SAGV{I|L}{I|L};[{I|L}P]VTAVG{I|L}{I|L};[{I|L}P]AS{I|L}GV{I|L}{I|L};[{I|L}P]{I|L}SA{I|L}GV{I|L};[{I|L}P]{I|L}SAG{I|L}V{I|L};[{I|L}P]AS{I|L}{I|L}GV{I|L};[{I|L}P]VTAAVV{I|L} 8.056;7.8941;7.8006;7.5148;7.4389;7.4104;7.3529;7.2594;7.2485;7.1835 -;-;-;-;-;-;-;-;-;- 4285 1 1.519 107745.8 0.4799999892711639 13423 5122 18539 HBL1_DMSO_200M_050219_2,18547 HBL1_DMSO_200M_050219_2,18547,ILPALSGVI True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18548 99.698 629.0 235510.0 25 0 24555.0 + -1 DCIVFAVL 8 100 936.486737988108 935.479461521508 1 936.4850341677666 MULTI CID FTMS 0 0 0 18539 108050.6640625 0.6739598454868446 -4 0.1237869262695312 9 Carbamidomethyl (C) _DC(Carbamidomethyl (C))IVFAVL_ REV__ENSG00000172901|ENST00000357872|LVRN;REV__nc|ENSG00000172901|Q6Q4G3-2|LVRN 30.22481116460888 0.4082965392918993 4 {[VA]|[{I|L}G]}ADMAV{M(Oxidation (M))|F}{I|L} 9 -1 + 77.911 0.0 0.0 8.3285 8.3285 85.369 0.0 0.0 0.0 13.46787486224656 16.478174818886373 13.46787486224656 3.4948500216800937 0 0.3054621874040891 1.3010299956639813 1.024227503252014 0.0 {[VA]|[{I|L}G]}ADMAV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ADAMV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ADMVA{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}AADMV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ADCVV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ADMA{M(Oxidation (M))|F}V{I|L};{[VA]|[{I|L}G]}ADAVM{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ADAM{M(Oxidation (M))|F}V{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VMAV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}AADVM{M(Oxidation (M))|F}{I|L} 8.3285;7.9549;7.7502;7.6331;7.4449;7.3066;7.0972;6.933;6.8888;6.7754 -;-;-;-;-;-;-;-;-;- 3446 1 1.519 100606.5 1.0 13424 5122 18539 HBL1_DMSO_200M_050219_2,18548 HBL1_DMSO_200M_050219_2,18548,DCIVFAVL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18549 99.708 525.0 349780.0 25 0 48149.0 43850 YFIHMNLV 8 143 518.7676063256127 1035.5206597180254 2 518.7684203982353 MULTI CID FTMS 0 0 0 18539 104060.15625 0.2480247142456315 -5 0.132232666015625 10 Unmodified _YFIHMNLV_ ENST00000482587.5_3_1:179833717-179833777:-|nuORF 28.17323086031832 0.4514957916281387 4 [H{I|L}]MN{I|L}{M(Oxidation (M))|F}YV 8 4 + 45.359 0.0 0.0 4.3803 4.3803 68.204 0.0 0.0 0.0 1.5490195998574308 5.841218823962109 1.5490195998574308 1.5490195998574308 0 0.4247425010840047 0.9208187539523752 0.0 0.0 [H{I|L}]MN{I|L}{M(Oxidation (M))|F}YV;[HM]{I|L}N{I|L}{M(Oxidation (M))|F}YV;[H{I|L}]MVQ{M(Oxidation (M))|F}YV;[H{I|L}]MVGA{M(Oxidation (M))|F}YV;[HM]VQ{I|L}{M(Oxidation (M))|F}YV;[HM]{I|L}VQ{M(Oxidation (M))|F}YV;[HM]{I|L}VGA{M(Oxidation (M))|F}YV;[H{I|L}]M{M(Oxidation (M))|F}QVYV;[H{I|L}]MVG{M(Oxidation (M))|F}AYV;[HM]{I|L}{M(Oxidation (M))|F}QVYV 4.3803;4.2307;3.996;3.9466;3.94;3.8465;3.7971;3.7376;3.6559;3.5881 -;-;-;-;-;-;-;-;-;- 3518 1 1.519 141301.3 1.0 13425 5122 18539 HBL1_DMSO_200M_050219_2,18549 HBL1_DMSO_200M_050219_2,18549,YFIHMNLV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18551 99.712 58.0 1097100.0 25 0 129430.0 + 39342 VAFSQVLTI 9 90 489.2862840615309 976.558015189862 2 489.2867004275322 MULTI CID FTMS 0 0 0 18550 1057222.5 0.9776929245350088 2 -0.0473556518554687 1 Unmodified _VAFSQVLTI_ ENSG00000104976|ENST00000221573|SNAPC2 67.34385681178166 0.0221257235307089 4 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}SQV 6 3 43.324 0.0 0.0 4.4364 0.0 0.0 0.0 342.2018871682829 342.2018871682829 16.686252728754987 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.7742275032520141 0.75 + {[VA]|[{I|L}G]}{M(Oxidation (M))|F}SQV 4.4364 + + 700 1 1.519 54088.9 1.0 13426 5123 18550 HBL1_DMSO_200M_050219_2,18551 HBL1_DMSO_200M_050219_2,18551,VAFSQVLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18552 99.718 325.0 230500.0 25 0 27849.0 24472 MIENGSLSFL 10 114 555.7768051956598 1109.5390574581195 2 555.7764770388603 MULTI CID FTMS 0 0 0 18550 110103.6875 0.7656061562825538 2 -0.0473556518554687 2 Unmodified _MIENGSLSFL_ ENSG00000182492|ENST00000331595|BGN 43.85829265575387 0.1168243637355526 4 {I|L}TR{I|L}S{M(Oxidation (M))|F} 6 6 30.214 0.0 0.0 2.7231 0.0 0.0 374.1365690429959 0.0 374.1365690429959 0.0 9.825924924280294 0.0 0.0 0 0.3807196863200844 0.0 0.2742275032520141 0.0 {I|L}TR{I|L}S{M(Oxidation (M))|F} 2.7231 - 1042 + 1 1.519 64281.9 1.0 13427 5123 18550 HBL1_DMSO_200M_050219_2,18552 HBL1_DMSO_200M_050219_2,18552,MIENGSLSFL True False IVFEDFARL 99.718208 555.77647703886 161012.40625 18550.0 nc|ENSG00000141480|P32121-5|ARRB2;;nc|ENSG00000141480|P32121-4|ARRB2;;nc|ENSG00000141480|P32121-3|ARRB2;;ENSG00000141480|ENST00000269260|ARRB2;;nc|ENSG00000141480|P32121-2|ARRB2 0.8368618736664454 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18553 99.72 72.0 700800.0 25 0 60795.0 31768 RSEFNDAIV 9 87 525.7659321165862 1049.5173112999723 2 525.7666503787041 MULTI CID FTMS 0 0 0 18550 743968.875 0.9328094419561608 -1 0.0752182006835937 3 Unmodified _RSEFNDAIV_ ENSG00000215041|ENST00000399464|NEURL4;nc|ENSG00000215041|Q96JN8-2|NEURL4 17.11289562659939 0.3734572693229295 4 [QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 6 6 43.364 0.0 0.0 4.1318 0.0 0.0 0.0 298.1725214636895 298.1725214636895 22.645228064086 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.75 [QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 4.1318 - 327 1 1.519 49288.4 1.0 13428 5123 18550 HBL1_DMSO_200M_050219_2,18553 HBL1_DMSO_200M_050219_2,18553,RSEFNDAIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18554 99.728 446.0 182120.0 25 0 28104.0 + 22625 LPYLVSNVI 9 111 509.30241505586895 1016.590277178538 2 509.3034240603447 MULTI CID FTMS 0 0 0 18550 172501.59375 1.0 0 0.0 4 Unmodified _LPYLVSNVI_ ENSG00000165916|ENST00000298852|PSMC3;ENST00000528362.1_1_11:47446139-47447800:-|nuORF;ENST00000531653.5_1_11:47445967-47447800:-|nuORF 56.541270873467816 0.0279970378729908 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}VSNV{I|L} 9 2 + 62.515 0.0 0.0 6.1495 6.1495 75.844 0.0 0.0 0.0 9.834007381805383 10.330145895351848 9.834007381805383 1.7609125905568137 0 0.6435078169319297 1.0969100130080565 0.9247425010840048 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}VSNV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}V{I|L}SNV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}VSGGV{I|L};[{I|L}P]Y{I|L}VSNV{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}V{I|L}SGGV{I|L};[{I|L}P]YV{I|L}SNV{I|L};[{I|L}P]Y{I|L}VSGGV{I|L};[{I|L}P]YV{I|L}SGGV{I|L};[Y{I|L}]P{I|L}VSNV{I|L};[Y{I|L}]PV{I|L}SNV{I|L} 6.1495;5.9763;5.2437;5.1822;5.0705;5.0089;4.2764;4.1031;4.0868;3.9136 -;-;-;+;-;-;-;-;-;- + 1217 1 1.519 68762.0 1.0 13429 5123 18550 HBL1_DMSO_200M_050219_2,18554 HBL1_DMSO_200M_050219_2,18554,LPYLVSNVI True True LPYLVSNVI 99.727817 509.303424060345 1200584.875 18550.0 ENSG00000165916|ENST00000298852|PSMC3;;ENST00000531653.5_1_11:47445967-47447800:-|nuORF;;ENST00000528362.1_1_11:47446139-47447800:-|nuORF 2.1577990849812827 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18555 99.742 800.0 88972.0 25 0 5494.4 -1 0 101 831.89812422319 3323.56339102636 4 832.4006835818291 MULTI CID FTMS 0 0 0 18550 125484.4609375 0.9779841678950826 -5 0.199005126953125 5 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 45.851 0.0 0.0 1.3796 0.0 0.0 0.0 2282.947963774221 2282.947963774221 28.047444008242906 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.3796 - 414 1 1.519 60286.7 0.5 13430 5123 18550 HBL1_DMSO_200M_050219_2,18555 HBL1_DMSO_200M_050219_2,18555, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18557 99.746 100.0 599060.0 25 0 82659.0 + 6658 EAWPALQI 8 90 464.2504141008629 926.486275268526 2 464.2505981326103 MULTI CID FTMS 0 0 0 18556 552211.0 0.4420889165844988 7 -0.2125167846679687 1 Unmodified _EAWPALQI_ ENSG00000158526|ENST00000375151|TSR2 56.541270873467816 0.1144128637334507 4 [PA]WEA 5 5 27.152 0.0 0.0 2.9307 0.0 0.0 0.0 369.2148231475789 369.2148231475789 9.717262228329565 0.0 0.0 0.0 0 0.0 1.0 0.9247425010840048 0.0 [PA]WEA 2.9307 - 209 1 1.519 53915.2 1.0 13431 5124 18556 HBL1_DMSO_200M_050219_2,18557 HBL1_DMSO_200M_050219_2,18557,EAWPALQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18558 99.755 489.0 236730.0 25 0 41541.0 + 9132 FFPVHFQEF 9 110 599.2896139696999 1196.5646750061996 2 599.2910644412041 MULTI CID FTMS 0 0 0 18556 139142.265625 0.8432136353375542 -3 0.14544677734375 2 Unmodified _FFPVHFQEF_ ENSG00000033100|ENST00000035307|CHPF2;nc|ENSG00000033100|Q9P2E5-2|CHPF2 37.97399986684836 0.0865783450051559 4 {[{M(Oxidation (M))|F}H]|[RQ]}VPQE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 9 6 + 35.019 0.0 0.0 2.9266 2.9266 68.657 0.0 0.0 0.0 4.137342758552702 7.662574822053557 4.137342758552702 4.137342758552702 0 0.3182503180159344 0.9208187539523752 0.3054621874040891 0.3252574989159953 {[{M(Oxidation (M))|F}H]|[RQ]}VPQE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F};[HV]P{M(Oxidation (M))|F}QE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}VPQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];{[{M(Oxidation (M))|F}H]|[RQ]}VP[AG]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}VPQ{M(Oxidation (M))|F}E{M(Oxidation (M))|F}{M(Oxidation (M))|F};[HV]P{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[WK]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F};[HV]{M(Oxidation (M))|F}PQE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F};[HV]P{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}E{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.9266;2.5809;2.417;2.2785;2.1571;2.0008;1.9327;1.8481;1.7834;1.655 -;-;-;-;-;-;-;-;-;- 440 1 1.519 88611.9 1.0 13432 5124 18556 HBL1_DMSO_200M_050219_2,18558 HBL1_DMSO_200M_050219_2,18558,FFPVHFQEF True False FFPVHFQEF 99.754954 599.291064441204 1862754.0 18556.0 ENSG00000033100|ENST00000035307|CHPF2;;nc|ENSG00000033100|Q9P2E5-2|CHPF2 4.931381622950236 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18560 99.76 3.2 19836000.0 25 0 2845900.0 + 1822 ALTELLAKI 9 82 486.3103246248441 970.6060963164882 2 486.3110229372978 MULTI CID FTMS 0 0 0 18559 19047832.0 0.869256515351357 2 -0.0743331909179687 1 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 92.4914307365334 0.0139747738690111 4 [{I|L}A]TE{I|L}{I|L}AK{I|L} 9 0 + 88.081 0.0 0.0 9.0748 9.0748 99.175 0.0 0.0 0.0 68.52819323923855 12.587418566968154 12.587418566968154 88.08078722580136 0 1.5356668758921828 2.0 0.3494850021680094 0.2396518287104437 + + [{I|L}A]TE{I|L}{I|L}AK{I|L} 9.0748 + + 442 + 1 1.517 56897.3 1.0 13433 5125 18559 HBL1_DMSO_200M_050219_2,18560 HBL1_DMSO_200M_050219_2,18560,ALTELLAKI True True ALTELLAKI 99.759645 486.311022937298 695375808.0 18559.0 ENST00000536795.1_1_12:4387934-4398180:+|nuORF;;ENSG00000118971|ENST00000261254|CCND2 4.407836437225342 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18561 99.761 31.0 1588300.0 25 0 134760.0 + 25270 MVVDIVQEL 9 86 523.2831876890293 1044.5518224448583 2 523.2842285037041 MULTI CID FTMS 0 0 0 18559 1217402.0 0.8488435667164131 2 -0.0743331909179687 2 Unmodified _MVVDIVQEL_ ENSG00000160209|ENST00000291565|PDXK;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;nc|ENSG00000160209|O00764-3|PDXK 36.04419817259434 0.0971720506436186 4 {[QN]|[E{I|L}]|[KN]}AM{I|L}V 6 7 30.635 0.0 0.0 2.9328 0.0 0.0 0.0 385.1696562673773 385.1696562673773 12.926988764564218 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.0 {[QN]|[E{I|L}]|[KN]}AM{I|L}V 2.9328 - 137 1 1.517 43600.6 1.0 13434 5125 18559 HBL1_DMSO_200M_050219_2,18561 HBL1_DMSO_200M_050219_2,18561,MVVDIVQEL True True MVVDIVQEL 99.760824 523.284228503704 10199453.0 18559.0 nc|ENSG00000160209|O00764-3|PDXK;;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;;ENSG00000160209|ENST00000291565|PDXK 6.225534121195476 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18562 99.763 94.0 552280.0 25 0 60087.0 + 22527 LPWESMPSL 9 101 530.2625147709357 1058.5104766086713 2 530.2628051638603 MULTI CID FTMS 0 0 0 18559 268083.21875 0.6709592066743472 -3 0.1225738525390625 3 Unmodified _LPWESMPSL_ ENSG00000135476|ENST00000257934|ESPL1;nc|ENSG00000135476|Q14674-2|ESPL1 60.38955033654506 0.025866396858536 4 [PS]MPS{I|L}M 7 4 42.582 0.0 0.0 4.0228 0.0 0.0 0.0 312.1576547563341 312.1576547563341 19.30542677479206 0.0 0.0 0.0 0 0.5 0.8860566476931632 1.2302046884880935 0.0 [PS]MPS{I|L}M 4.0228 - 689 1 1.517 48839.4 1.0 13435 5125 18559 HBL1_DMSO_200M_050219_2,18562 HBL1_DMSO_200M_050219_2,18562,LPWESMPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18563 99.771 448.0 192900.0 25 0 15674.0 -1 0 86 688.0731739034812 2748.2635897475247 4 688.3251220583916 MULTI CID FTMS 0 0 0 18559 189911.4375 0.0583853615285775 20 -0.813201904296875 4 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 57.942 0.0 0.0 2.1083 0.0 0.0 0.0 1707.6513140752866 1707.6513140752866 31.87453334498805 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2614393726401688 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.1083 - 1735 1 1.517 71050.3 1.0 13436 5125 18559 HBL1_DMSO_200M_050219_2,18563 HBL1_DMSO_200M_050219_2,18563, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18564 99.778 418.0 251190.0 25 0 25812.0 + 36665 TAYLFSRFV 9 118 552.2978924668425 1102.581232000485 2 552.2999145388603 MULTI CID FTMS 0 0 0 18559 106875.71875 0.5147445089584884 -4 0.1587753295898437 5 Unmodified _TAYLFSRFV_ ENSG00000184575|ENST00000332707|XPOT 31.26834338654808 0.1333407332142048 4 [TA]Y{I|L}{M(Oxidation (M))|F}SR{M(Oxidation (M))|F}V 9 0 + 66.089 0.0 0.0 5.994 5.994 76.799 0.0 0.0 0.0 21.590579197569014 2.6626788940477013 2.6626788940477013 2.6626788940477013 0 0.8807196863200843 1.6989700043360187 0.3807196863200844 0.0 + + [TA]Y{I|L}{M(Oxidation (M))|F}SR{M(Oxidation (M))|F}V;[TA]Y{I|L}{M(Oxidation (M))|F}SRV{M(Oxidation (M))|F};[TA]Y{I|L}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L};[TA]Y{I|L}V[WH]T{I|L};[TA]Y{I|L}VVV[HC]V;{[QN]|[E{I|L}]|[KN]}[HK]{M(Oxidation (M))|F}{I|L}Y[PG];[TA]{[{M(Oxidation (M))|F}H]|[RQ]}VV{I|L}Y[PG];{[QN]|[E{I|L}]|[KN]}DVVV{I|L}[WM];[{I|L}T][RH]{M(Oxidation (M))|F}{I|L}[WM];[{I|L}V][HA]S{M(Oxidation (M))|F}{I|L}Y[PG] 5.994;5.7526;4.8355;4.4028;4.2483;3.6789;3.6713;3.289;2.947;2.8726 +;-;-;-;-;-;-;-;-;- + 366 + 1 1.517 88402.6 1.0 13437 5125 18559 HBL1_DMSO_200M_050219_2,18564 HBL1_DMSO_200M_050219_2,18564,TAYLFSRFV False True TAYLFSRFV 99.778331 552.29991453886 3327836.75 18559.0 ENSG00000184575|ENST00000332707|XPOT 5.333604653676351 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18565 99.783 250.0 272170.0 25 0 25347.0 + 12101 GQIDSIHLLL 10 112 554.8218215737288 1107.6290902142575 2 554.8228027224541 MULTI CID FTMS 0 0 0 18559 97633.3203125 0.7004906155373022 -2 0.0473556518554687 6 Unmodified _GQIDSIHLLL_ ENSG00000066739|ENST00000359933|ATG2B 20.453626601364224 0.5043500229302764 4 {I|L}{I|L}{I|L}D[YR] 6 8 24.679 0.0 0.0 2.2281 0.0 0.0 316.17391286733226 0.0 316.17391286733226 0.0 11.580306233405295 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {I|L}{I|L}{I|L}D[YR] 2.2281 - 510 + 1 1.517 58272.5 1.0 13438 5125 18559 HBL1_DMSO_200M_050219_2,18565 HBL1_DMSO_200M_050219_2,18565,GQIDSIHLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18567 99.788 45.0 1469800.0 25 0 219560.0 + 19583 LFVVGTEVDS 10 81 533.2765639167626 1064.538574900325 2 533.2773925662041 MULTI CID FTMS 0 0 0 18566 1052269.25 0.959074757017193 3 -0.097442626953125 1 Unmodified _LFVVGTEVDS_ REV__ENSG00000204386|ENST00000375631|NEU1;REV__ENST00000480384.1_1_6:31828203-31830565:-|nuORF 20.453626601364224 0.5043500229302764 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}GV 7 -1 36.955 0.0 0.0 3.4715 0.0 0.0 0.0 336.0698389534728 336.0698389534728 3.767507096020992 0.0 0.0 0.0 0 0.8494850021680094 1.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VP{I|L}GV 3.4715 - 203 + 1 1.517 59672.3 1.0 13439 5126 18566 HBL1_DMSO_200M_050219_2,18567 HBL1_DMSO_200M_050219_2,18567,LFVVGTEVDS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18568 99.802 800.0 131330.0 25 0 22953.0 + 10133 FPWPKVLKI 9 111 376.5708211178986 1126.690633953896 3 376.5708801150322 MULTI CID FTMS 0 0 0 18566 85253.2890625 0.3060618838189933 -34 1.4484100341796875 2 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 23.78978130925829 0.2284941198415988 4 PV{I|L}K{I|L}{[MG]|[TS]}{I|L}E 9 7 34.447 0.0 0.0 3.0574 0.0 0.0 128.09536940742345 0.0 128.09536940742345 0.0 22.764706236572472 0.0 0.0 0 0.0 0.0 0.0 0.0 PV{I|L}K{I|L}{[MG]|[TS]}{I|L}E 3.0574 - 110 1 1.517 92127.7 0.3499999940395355 13440 5126 18566 HBL1_DMSO_200M_050219_2,18568 HBL1_DMSO_200M_050219_2,18568,FPWPKVLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18569 99.815 800.0 136320.0 25 0 12359.0 -1 0 113 1108.5050615497405 2214.995570166281 2 1109.012744128704 MULTI CID FTMS 0 0 0 18566 78019.703125 0.5992875296200052 8 -0.3671112060546875 3 4 [NP]{M(Oxidation (M))|F}ASG{I|L}A{M(Oxidation (M))|F}S 10 -1 51.438 0.0 0.0 2.3222 0.0 0.0 0.0 1220.4960944184877 1220.4960944184877 29.833654194535697 0.0 0.0 0.0 0 0.0 0.0 0.9361818737241736 1.7786596949921218 [NP]{M(Oxidation (M))|F}ASG{I|L}A{M(Oxidation (M))|F}S 2.3222 - 11550 1 1.517 73203.2 0.4699999988079071 13441 5126 18566 HBL1_DMSO_200M_050219_2,18569 HBL1_DMSO_200M_050219_2,18569, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18570 99.829 800.0 101230.0 25 0 4468.6 -1 0 125 922.48007144303 1842.94558995286 2 922.4846069216728 MULTI CID FTMS 0 0 0 18566 79314.1484375 1.0 0 0.0 4 4 [{I|L}P]{I|L}{I|L}ANA[DN][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}VW[TP] 16 -1 + 47.283 0.0 0.0 2.5656 2.5656 45.185 0.0 0.0 0.0 5.351132016973494 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.3494850021680094 0.0 [{I|L}P]{I|L}{I|L}ANA[DN][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}VW[TP];[{I|L}P]{I|L}{I|L}ANA[QT][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}VW[TP];[{I|L}P]{I|L}{I|L}AQA{[QS]|[NT]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}VW[TP];[{I|L}P]{I|L}{I|L}AN{[WN]|[YH]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}VWVV;[{I|L}P]{I|L}{I|L}AQG[QT][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}VW[TP];[{I|L}P]{I|L}{I|L}AQG[DN][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}VWVV;[{I|L}P]{I|L}{I|L}ANA[DN][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{I|L}WVV;[{I|L}P]{I|L}{I|L}ANA[QT][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{I|L}W[TP];[{I|L}P]{I|L}{I|L}AQA{[QS]|[NT]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{I|L}W[TP];[{I|L}V]PGRVA[DN][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}VW[TP] 2.5656;2.5656;2.5378;2.5019;2.4701;2.4701;2.3067;2.3067;2.279;2.2752 -;-;-;-;-;-;-;-;-;- 4716 1 1.517 55387.2 0.449999988079071 13442 5126 18566 HBL1_DMSO_200M_050219_2,18570 HBL1_DMSO_200M_050219_2,18570, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18572 99.834 74.0 1261000.0 25 0 170470.0 + 21630 LPLAHVLEL 9 90 502.8104594408647 1003.6063659485294 2 502.8105041384697 MULTI CID FTMS 0 0 0 18571 865569.25 0.6670961404774346 6 -0.2139663696289062 1 Unmodified _LPLAHVLEL_ ENSG00000068366|ENST00000672401|ACSL4;ENSG00000123983|ENST00000357430|ACSL3;nc|ENSG00000068366|O60488|ACSL4 89.42679046578446 0.015225546354407 4 [{I|L}P]AHV{I|L}E{I|L}{I|L} 9 2 + 62.858 0.0 0.0 6.2633 6.2633 75.749 0.0 0.0 0.0 0.1630271179170961 28.12182729135785 0.1630271179170961 1.5186375580366729 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}P]AHV{I|L}E{I|L}{I|L};[{I|L}P]AHV{I|L}{I|L}E{I|L};[{I|L}P]AH{I|L}VE{I|L}{I|L};[{I|L}P]AH{I|L}V{I|L}E{I|L};[{I|L}P]A{I|L}HVE{I|L}{I|L};{I|L}{M(Oxidation (M))|F}{I|L}{I|L}V{[WT]|[RM]}{I|L};[HV]A{I|L}P{I|L}E{I|L}{I|L};[{I|L}P]A{I|L}HV{I|L}E{I|L};[HV]A{I|L}P{I|L}{I|L}E{I|L};{I|L}{M(Oxidation (M))|F}{I|L}V{I|L}{[WT]|[RM]}{I|L} 6.2633;6.1119;5.9633;5.812;5.5006;5.4914;5.3629;5.3493;5.2116;5.1915 -;-;-;-;-;-;-;-;-;- 1457 1 1.517 78010.0 1.0 13443 5127 18571 HBL1_DMSO_200M_050219_2,18572 HBL1_DMSO_200M_050219_2,18572,LPLAHVLEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18573 99.839 257.0 381650.0 25 0 42990.0 + 32065 RVLEMLEAL 9 103 537.3048493182582 1072.5951457033163 2 537.3053466677666 MULTI CID FTMS 0 0 0 18571 254143.84375 0.6060171129762548 -5 0.1969070434570312 2 Unmodified _RVLEMLEAL_ ENSG00000150977|ENST00000280571|RILPL2 43.77239144664712 0.0547478964384323 4 {[QN]|[E{I|L}]|[KN]}A[{I|L}A]M{I|L}EA{I|L} 10 4 + 69.486 0.0 0.0 6.4783 6.4783 80.512 0.0 0.0 0.0 10.285371682087217 48.39394387499517 10.285371682087217 3.521825181113627 0 1.1989700043360187 0.8239087409443188 0.3054621874040891 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}A[{I|L}A]M{I|L}EA{I|L};{[QN]|[E{I|L}]|[KN]}[RV]M{I|L}EA{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]M{I|L}EA{I|L};[TA][KA]TQ[RN]A{I|L} 6.4783;6.15;4.6916;1.5799 -;-;-;- 310 1 1.517 84322.9 1.0 13444 5127 18571 HBL1_DMSO_200M_050219_2,18573 HBL1_DMSO_200M_050219_2,18573,RVLEMLEAL True True RVLEMLEAL 99.838759 537.305346667767 9599901.0 18571.0 ENSG00000150977|ENST00000280571|RILPL2 5.21675984064738 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18574 99.844 257.0 624350.0 25 0 37010.0 + 23966 LVSIGALI 8 88 785.5129435678448 784.5056671012447 1 785.5134765505791 MULTI CID FTMS 0 0 0 18571 385568.4375 1.0 0 0.0 3 Unmodified _LVSIGALI_ ENSG00000118514|ENST00000265605|ALDH8A1;nc|ENSG00000118514|Q9H2A2-4|ALDH8A1 67.03532852164291 0.116292309877964 4 [{I|L}V]SQ{I|L}{I|L}{I|L} 7 3 + 59.275 0.0 0.0 7.5557 7.5557 85.197 0.0 0.0 0.0 5.274334638038454 16.320232147054057 5.274334638038454 4.382031886892925 0 0.3252574989159953 0.9208187539523752 1.6549471895720984 0.0 [{I|L}V]SQ{I|L}{I|L}{I|L};[{I|L}V]SAG{I|L}{I|L}{I|L};{I|L}{I|L}QSV{I|L}{I|L};{I|L}{I|L}VSGA{I|L}{I|L};[{I|L}V]S{I|L}GA{I|L}{I|L};{I|L}{I|L}GSG{I|L}{I|L}{I|L};{I|L}{I|L}VSQ{I|L}{I|L};[{I|L}V]S{I|L}Q{I|L}{I|L};{I|L}{I|L}[NS]{I|L}{I|L}{I|L};[VS]Q{I|L}{I|L}{I|L}{I|L} 7.5557;6.9972;6.8834;6.8118;6.8102;6.8013;6.6849;6.6833;6.6281;6.4673 -;-;-;-;+;-;-;-;-;- + 858 1 1.517 112411.9 1.0 13445 5127 18571 HBL1_DMSO_200M_050219_2,18574 HBL1_DMSO_200M_050219_2,18574,LVSIGALI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18575 99.848 218.0 432970.0 25 0 62867.0 18836 LASLVGILTL 10 109 500.3262066640169 998.637860394834 2 500.3261596560478 MULTI CID FTMS 0 0 0 18571 204062.734375 0.1247108449648503 -7 0.2492904663085937 4 Unmodified _LASLVGILTL_ ENSG00000186806|ENST00000335624|VSIG10L;nc|ENSG00000186806|Q86VR7-2|VSIG10L 39.957323273325 0.1580177220464651 4 [{I|L}T]{I|L}NV{I|L}{I|L}T{I|L} 9 4 + 67.485 0.0 0.0 6.7577 6.7577 81.44 0.0 0.0 0.0 3.4645289853159085 0.6677903326085755 0.6677903326085755 3.4645289853159085 0 0.8182503180159344 1.5228787452803376 0.8209991640913002 0.0 [{I|L}T]{I|L}NV{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}VAK{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}AVK{I|L}{I|L}T{I|L};[{I|L}T]{I|L}N{I|L}V{I|L}T{I|L};[{I|L}T]{I|L}GGV{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{I|L}NV{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}AKV{I|L}{I|L}T{I|L};[{I|L}T]{I|L}NV{I|L}T{I|L}{I|L};[{I|L}T][TP]K{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}VA{I|L}K{I|L}T{I|L} 6.7577;6.4108;6.0123;6.0053;5.8356;5.829;5.7108;5.5571;5.483;5.357 -;-;-;-;-;-;-;-;-;- 3895 1 1.517 75587.7 1.0 13446 5127 18571 HBL1_DMSO_200M_050219_2,18575 HBL1_DMSO_200M_050219_2,18575,LASLVGILTL False True KAIEVLLTL 99.847661 500.326159656048 29986044.0 18571.0 ENSG00000163507|ENST00000295746|CIP2A;;ENST00000487834.5_1_3:108281971-108308222:-|nuORF;;nc|ENSG00000163507|Q8TCG1-2|CIP2A 0.7970535755157471 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18576 99.854 329.0 189670.0 25 0 23889.0 + 35612 STYKFFEVI 9 107 567.2977130476181 1132.580873162036 2 567.2979003787041 MULTI CID FTMS 0 0 0 18571 136687.28125 0.0243407063717682 14 -0.687774658203125 5 Unmodified _STYKFFEVI_ ENSG00000174748|ENST00000307839|RPL15;ENST00000436146.1_1_3:23959450-23960989:+|nuORF;ENST00000490223.1_1_3:23959920-23960989:+|nuORF 34.40172386719151 0.1061884637610825 4 [{I|L}P]E{[WT]|[RM]}{M(Oxidation (M))|F}EV{I|L} 9 5 + 62.374 0.0 0.0 5.5072 5.5072 79.827 0.0 0.0 0.0 14.744237387763093 14.973024840566469 14.744237387763093 6.020599913279625 0 0.8494850021680094 1.2218487496163564 0.5796896906561032 0.0 [{I|L}P]E{[WT]|[RM]}{M(Oxidation (M))|F}EV{I|L};[{I|L}P]E{[WT]|[RM]}E{M(Oxidation (M))|F}V{I|L};{[QN]|[E{I|L}]|[KN]}P{[WT]|[RM]}{M(Oxidation (M))|F}EV{I|L};{[QN]|[E{I|L}]|[KN]}P{[WT]|[RM]}E{M(Oxidation (M))|F}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}K[HD]V{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EKY{[MG]|[TS]}V{I|L};[{I|L}P]{I|L}C(Carbamidomethyl (C))[KC]{[MG]|[TS]}V{I|L};[YK]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y{[MG]|[TS]}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}KYTS{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EVKYTS{I|L} 5.5072;4.9757;4.2054;3.6738;3.1241;3.01;2.9913;2.3077;2.3015;2.2976 -;-;-;-;-;-;-;-;-;- 698 1 1.517 56241.5 1.0 13447 5127 18571 HBL1_DMSO_200M_050219_2,18576 HBL1_DMSO_200M_050219_2,18576,STYKFFEVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18578 99.87 800.0 285110.0 25 0 20078.0 + 17050 KLAAIIPD 8 96 840.5200011848636 839.5127247182636 1 840.5176269412041 MULTI CID FTMS 0 0 0 18577 47005.5 0.420151857068996 5 -0.1895217895507812 1 Unmodified _KLAAIIPD_ ENSG00000176102|ENST00000323959|CSTF3 67.34385681178166 0.1158486345035644 4 KA{I|L}{I|L}A{I|L}PD 8 3 + 73.236 0.0 0.0 8.7236 8.7236 81.489 0.0 0.0 0.0 8.053723871527794 3.862430794108036 3.862430794108036 1.2371250542002343 0 1.089136830878453 0.0 1.8979400086720373 0.0 KA{I|L}{I|L}A{I|L}PD;K{I|L}A{I|L}A{I|L}PD;KA{I|L}{I|L}AE[VP];K{I|L}A{I|L}AE[VP];KA{I|L}A{I|L}{I|L}PD;K{I|L}AA{I|L}{I|L}PD;KA{I|L}A{I|L}E[VP];KA{I|L}{I|L}EA[VP];K{I|L}AA{I|L}E[VP];K{I|L}A{I|L}EA[VP] 8.7236;8.5762;8.2635;8.1161;7.9471;7.7997;7.487;7.3685;7.3397;7.2212 -;-;-;-;-;+;-;-;-;- + 1193 + 1 1.517 158114.6 0.4300000071525574 13448 5128 18577 HBL1_DMSO_200M_050219_2,18578 HBL1_DMSO_200M_050219_2,18578,KLAAIIPD True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18579 99.871 42.0 1703100.0 25 0 144510.0 + 45649 YVPPELITL 9 91 522.8020859192114 1043.5896189052228 2 522.8029052615166 MULTI CID FTMS 0 0 0 18577 698718.6875 0.889580807237661 -5 0.1461334228515625 2 Unmodified _YVPPELITL_ ENSG00000119718|ENST00000266126|EIF2B2;ENST00000556668.1_1_14:75473249-75475888:+|nuORF 23.1484247019978 0.2366544122328345 4 {[QN]|[E{I|L}]|[KN]}PP{I|L}T 6 5 30.824 0.0 0.0 2.9537 0.0 0.0 0.0 390.2039737238353 390.2039737238353 4.837965668650035 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}PP{I|L}T 2.9537 - 349 1 1.517 62879.8 1.0 13449 5128 18577 HBL1_DMSO_200M_050219_2,18579 HBL1_DMSO_200M_050219_2,18579,YVPPELITL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18580 99.874 135.0 593020.0 25 0 62593.0 + 19399 LESIFYMQ 8 100 515.7511938626426 1029.487834792085 2 515.7516967654228 MULTI CID FTMS 0 0 0 18577 184543.84375 0.9215530941042808 -2 0.070709228515625 3 Unmodified _LESIFYMQ_ REV__nc|ENSG00000203581|Q96R84|OR1F2P 23.1484247019978 0.5573009939494978 4 {I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}{I|L}EV 7 -1 43.945 0.0 0.0 4.2686 0.0 0.0 0.0 208.07329736881096 208.07329736881096 19.291542829019352 0.0 0.0 0.0 0 0.0 2.0 0.3494850021680094 0.0 {I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}{I|L}EV 4.2686 - 817 + 1 1.517 67692.4 1.0 13450 5128 18577 HBL1_DMSO_200M_050219_2,18580 HBL1_DMSO_200M_050219_2,18580,LESIFYMQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18581 99.88 354.0 182140.0 25 0 15292.0 + 19044 LDLYRATFV 9 109 549.3031500371352 0 549.2352783083916 PEAK CID FTMS 0 0 0 -1 0 4 Unmodified _LDLYRATFV_ REV__ENSG00000105438|ENST00000330720|KDELR1;REV__ENST00000594643.1_1_19:48893647-48894615:-|nuORF;REV__ENST00000599084.1_1_19:48892794-48894615:-|nuORF 12.531546534597751 0.2832320739326029 4 P{M(Oxidation (M))|F} 2 -1 8.5835 0.0 0.0 0.78274 0.0 0.0 161.07137468188904 688.3740328424436 849.4454075243327 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F} 0.78274 - 47 + 1 1.517 58407.5 1.0 13451 5128 18577 HBL1_DMSO_200M_050219_2,18581 HBL1_DMSO_200M_050219_2,18581,LDLYRATFV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18583 99.886 181.0 445500.0 25 0 42819.0 + 18365 KVPEELVFASL 11 77 616.3499824807757 1230.6854120283513 2 616.3504516482353 MULTI CID FTMS 0 0 0 18582 364061.125 0.8454440444918605 2 -0.0736770629882812 1 Unmodified _KVPEELVFASL_ ENSG00000048707|ENST00000620676|VPS13D;nc|ENSG00000048707|Q5THJ4-2|VPS13D 51.487983226225225 0.1093896055713593 4 [EP]E{I|L}VKV{M(Oxidation (M))|F}AS{I|L} 11 4 + 86.336 0.0 0.0 7.0153 7.0153 87.952 0.0 0.0 0.0 8.538719643217604 15.07062321345802 8.538719643217604 8.538719643217604 0 1.586696871556164 0.9208187539523752 0.5 0.0 [EP]E{I|L}VKV{M(Oxidation (M))|F}AS{I|L};{[TV]|[{I|L}S]}[HM]VKV{M(Oxidation (M))|F}AS{I|L};[{M(Oxidation (M))|F}V]{[HG]|PP}VRV{M(Oxidation (M))|F}AS{I|L};[{M(Oxidation (M))|F}V]A[HQ]{I|L}V{M(Oxidation (M))|F}AS{I|L};[{M(Oxidation (M))|F}V][RH][VG]V{M(Oxidation (M))|F}AS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[TP]RV{M(Oxidation (M))|F}AS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[EP]KV{M(Oxidation (M))|F}AS{I|L};[EP]E{I|L}V{M(Oxidation (M))|F}A{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};[{M(Oxidation (M))|F}V]{[HG]|PP}V[VG]V{M(Oxidation (M))|F}AS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[TP][VG]V{M(Oxidation (M))|F}AS{I|L} 7.0153;6.3215;5.7767;5.6797;5.5374;5.4643;5.4446;5.1626;5.035;4.7225 -;-;-;-;-;-;-;-;-;- 746 1 1.517 63250.3 1.0 13452 5129 18582 HBL1_DMSO_200M_050219_2,18583 HBL1_DMSO_200M_050219_2,18583,KVPEELVFASL True True KVPEELVFASL 99.886417 616.350451648235 8052239.0 18582.0 ENSG00000048707|ENST00000620676|VPS13D;;nc|ENSG00000048707|Q5THJ4-2|VPS13D 5.673141797383626 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18584 99.889 153.0 554720.0 25 0 72561.0 + 34741 SPYPWPLNHI 10 81 612.3143340079008 1222.6141150826015 2 612.3138915896416 MULTI CID FTMS 0 0 0 18582 341841.1875 0.8343551890165419 24 -0.8675003051757812 2 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 81.89019881105858 0.0155187237978306 4 [PS]YPW{I|L}PV[HQ] 10 4 + 81.208 0.0 0.0 6.6422 6.6422 84.263 0.0 0.0 0.0 20.113168458567685 6.020599913279625 6.020599913279625 6.020599913279625 0 1.1989700043360187 1.5228787452803376 0.0 1.4604093769761874 [PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PN[H{I|L}];[PS]YPW{I|L}PGG[H{I|L}] 6.6422;6.1497;4.2056 -;-;- 330 + 1 1.517 66085.4 1.0 13453 5129 18582 HBL1_DMSO_200M_050219_2,18584 HBL1_DMSO_200M_050219_2,18584,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18585 99.899 568.0 213820.0 25 0 23566.0 + 27370 PIAPHSPLL 9 89 472.781783164464 943.549013395728 2 472.7821227908134 MULTI CID FTMS 0 0 0 18582 125484.8203125 0.7643889207687188 2 -0.0736770629882812 3 Unmodified _PIAPHSPLL_ REV__ENST00000175506.8_1_7:97501082-97501163:-|nuORF 30.22481116460888 0.1466181017706357 4 {I|L}PA{I|L}{M(Oxidation (M))|F}[RD]{I|L} 8 -1 + 66.151 0.0 0.0 7.0109 7.0109 82.872 0.0 0.0 0.0 49.72016505986112 3.979400086720375 3.979400086720375 3.7628749457997657 0 0.8807196863200843 1.5228787452803376 0.0 0.0 {I|L}PA{I|L}{M(Oxidation (M))|F}[RD]{I|L};{I|L}P{I|L}A{M(Oxidation (M))|F}[RD]{I|L};{I|L}PA{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}V;{I|L}P{I|L}A{M(Oxidation (M))|F}{[RE]|[WV]}V;{I|L}PA[KQ]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};{I|L}{I|L}PA{M(Oxidation (M))|F}[RD]{I|L};{I|L}{I|L}PA{M(Oxidation (M))|F}{[RE]|[WV]}V 7.0109;6.6121;6.3186;5.9198;4.8371;4.2756;3.5833 -;-;-;-;-;-;- 203 + 1 1.517 97160.9 1.0 13454 5129 18582 HBL1_DMSO_200M_050219_2,18585 HBL1_DMSO_200M_050219_2,18585,PIAPHSPLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18586 99.912 703.0 336940.0 25 0 26516.0 + 10042 FPNVEIVTI 9 177 516.2926314963414 1030.5707100594827 2 516.2935058474541 MULTI CID FTMS 0 0 0 18582 131833.65625 0.238042001746264 8 -0.492218017578125 4 Unmodified _FPNVEIVTI_ ENSG00000183337|ENST00000378444|BCOR;ENST00000442018.5_2_X:39911364-39913101:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR 49.93300154707207 0.0405168250806675 4 [Y{I|L}]Y{M(Oxidation (M))|F}{I|L}VT{I|L} 8 5 + 43.589 0.0 0.0 4.2296 4.2296 67.526 0.0 0.0 0.0 1.5305335578905428 6.677353201839438 1.5305335578905428 1.5305335578905428 0 0.8182503180159344 1.6989700043360187 0.0 0.0 [Y{I|L}]Y{M(Oxidation (M))|F}{I|L}VT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NVE{I|L}VT{I|L};[NP]VE{M(Oxidation (M))|F}{I|L}VT{I|L};[VP]NE{M(Oxidation (M))|F}{I|L}VT{I|L};[{I|L}P]DN{M(Oxidation (M))|F}{I|L}VT{I|L};[NP]V{M(Oxidation (M))|F}E{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}PN{M(Oxidation (M))|F}{I|L}VT{I|L};[VP]N{M(Oxidation (M))|F}E{I|L}VT{I|L};[Y{I|L}]Y{I|L}{M(Oxidation (M))|F}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}NP{M(Oxidation (M))|F}{I|L}VT{I|L} 4.2296;4.081;4.0398;3.9921;3.9519;3.869;3.8273;3.8212;3.7666;3.5352 -;+;-;-;-;-;-;-;-;- + 2594 1 1.517 181082.2 1.0 13455 5129 18582 HBL1_DMSO_200M_050219_2,18586 HBL1_DMSO_200M_050219_2,18586,FPNVEIVTI True True FPNVEIVTI 99.911634 516.293505847454 4908179.5 18582.0 ENSG00000183337|ENST00000378444|BCOR;;nc|ENSG00000183337|Q6W2J9-2|BCOR;;nc|ENSG00000183337|Q6W2J9-4|BCOR;;ENST00000442018.5_2_X:39911364-39913101:-|nuORF 1.9186850984891253 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18588 99.922 437.0 230690.0 25 0 19391.0 -1 0 107 917.0955245022128 2748.264744106838 3 917.4309570193292 MULTI CID FTMS 0 0 0 18587 183606.765625 0.0388645750968324 23 -0.8362274169921875 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 58.822 0.0 0.0 2.1403 0.0 0.0 0.0 1707.6485430304565 1707.6485430304565 23.333267986193675 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.1403 - 935 1 1.517 73231.7 1.0 13456 5130 18587 HBL1_DMSO_200M_050219_2,18588 HBL1_DMSO_200M_050219_2,18588, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18589 99.93 452.0 209500.0 25 0 14110.0 + 42896 VVPDWLHDI 9 117 547.2870926637855 1092.559632394371 2 547.2879516482353 MULTI CID FTMS 0 0 0 18587 117093.3828125 0.2157429295459803 8 -0.5174636840820312 2 Unmodified _VVPDWLHDI_ ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF 39.957323273325 0.0756908302845263 4 VVPDW{I|L}HD{I|L} 9 0 + 59.903 0.0 0.0 5.4828 5.4828 72.721 0.0 0.0 0.0 27.147642715192504 1.5490195998574308 1.5490195998574308 1.5490195998574308 0 0.4247425010840047 2.0 0.5055690986777881 0.0 + + VVPDW{I|L}HD{I|L};VVPDW{I|L}HEV;VV[{M(Oxidation (M))|F}V]P[YC(Carbamidomethyl (C))]P{I|L};VV{I|L}{[ET]|[MV]}[YC(Carbamidomethyl (C))]P{I|L};VVP[{M(Oxidation (M))|F}V][YC(Carbamidomethyl (C))]P{I|L};VV[{M(Oxidation (M))|F}V]P{[WT]|[RM]}{M(Oxidation (M))|F}V;VVP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{I|L};VV{I|L}{[ET]|[MV]}{[WT]|[RM]}{M(Oxidation (M))|F}V;VVP[{M(Oxidation (M))|F}V]{[WT]|[RM]}{M(Oxidation (M))|F}V 5.4828;5.3411;2.5754;2.3933;2.2999;2.1581;1.9776;1.976;1.8826 +;-;-;-;-;-;-;-;- + 467 + 1 1.517 78555.6 1.0 13457 5130 18587 HBL1_DMSO_200M_050219_2,18589 HBL1_DMSO_200M_050219_2,18589,VVPDWLHDI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18590 99.944 800.0 225550.0 25 0 26975.0 + 44963 YPQQIFIQI 9 144 575.3189044386688 1148.6232559441376 2 575.3193847537041 MULTI CID FTMS 0 0 0 18587 106482.7890625 0.4005643191856885 -3 0.0824508666992187 3 Unmodified _YPQQIFIQI_ ENSG00000105173|ENST00000262643|CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1 71.13359017698441 0.0206607516130725 4 [AG]{I|L}{M(Oxidation (M))|F}Q{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L} 10 4 + 80.41 0.0 0.0 7.0006 7.0006 76.521 0.0 0.0 0.0 0.4734421132636583 16.532125137753447 0.4734421132636583 0.4734421132636583 0 0.9604093769761876 1.5228787452803376 0.0 1.0228787452803376 [AG]{I|L}{M(Oxidation (M))|F}Q{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}]{M(Oxidation (M))|F}Q{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]PQ{I|L}Y{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]PQY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]QP{I|L}Y{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]QPY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]PQ{I|L}{M(Oxidation (M))|F}Y{I|L}Q{I|L};[AG]PYQ{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]{I|L}{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}{I|L}{I|L}Q{I|L};[Q{I|L}]{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}{I|L}{I|L}Q{I|L} 7.0006;6.9594;6.9373;6.9162;6.8101;6.789;6.4032;6.392;6.3576;6.3164 -;-;-;-;-;-;-;-;-;- 3377 1 1.517 136140.9 0.4600000083446502 13458 5130 18587 HBL1_DMSO_200M_050219_2,18590 HBL1_DMSO_200M_050219_2,18590,YPQQIFIQI True True YPQQIFIQI 99.943844 575.319384753704 2676909.75 18587.0 ENSG00000105173|ENST00000262643|CCNE1;;nc|ENSG00000105173|P24864-2|CCNE1;;nc|ENSG00000105173|P24864-3|CCNE1 4.721485296885173 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18591 99.954 582.0 165610.0 25 0 15395.0 + 24376 MFIDTVISSY 10 127 588.2858602085427 1174.5571674838852 2 588.2864257693291 MULTI CID FTMS 0 0 0 18587 101953.6171875 0.4652095518289064 -3 0.0824508666992187 4 Unmodified _MFIDTVISSY_ ENSG00000133863|ENST00000643185|TEX15;nc|ENSG00000133863|Q9BXT5|TEX15 64.23631603340823 0.0254735623525308 4 {I|L}[HT]SSY 6 5 37.0 0.0 0.0 3.1501 0.0 0.0 468.2171483880996 0.0 468.2171483880996 0.0 -1.486870246580153 -1.486870246580153 0.0 0 0.0 0.0 1.610924374808178 0.0 {I|L}[HT]SSY 3.1501 - 1954 + 1 1.517 76225.5 1.0 13459 5130 18587 HBL1_DMSO_200M_050219_2,18591 HBL1_DMSO_200M_050219_2,18591,MFIDTVISSY True True MFIDTVISSY 99.95404 588.286425769329 3856103.0 18587.0 ENSG00000133863|ENST00000643185|TEX15;;nc|ENSG00000133863|Q9BXT5|TEX15 7.118588924407959 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18593 99.96 134.0 689210.0 25 0 60259.0 + 20609 LLPHYPNWF 9 106 593.8056971687428 1185.5968414042854 2 593.8059570193291 MULTI CID FTMS 0 0 0 18592 448862.28125 0.8941452432073632 1 -0.0485382080078125 1 Unmodified _LLPHYPNWF_ ENSG00000159596|ENST00000372025|TMEM69 81.86404211737425 0.017065112157077 4 {[WN]|[YH]}P{I|L}{I|L}[NP]W{M(Oxidation (M))|F} 9 4 + 58.637 0.0 0.0 4.9458 4.9458 82.491 0.0 0.0 0.0 10.0404627391503 10.0404627391503 10.0404627391503 10.0404627391503 0 0.805462187404089 1.2218487496163564 0.0 0.25 {[WN]|[YH]}P{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{I|L}{I|L}[NP]W[NP]W{M(Oxidation (M))|F};[NP]W{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}P[NP]{I|L}{I|L}W{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}P[NP]W{I|L}{I|L}{M(Oxidation (M))|F};{[WN]|[YH]}P[VP][Q{I|L}]W{M(Oxidation (M))|F};[NP]W[NP]{I|L}{I|L}W{M(Oxidation (M))|F};[NP]W[NP]W{I|L}{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H[NP]{I|L}{I|L}W{M(Oxidation (M))|F} 4.9458;4.0989;3.5795;3.5138;3.282;3.2335;2.9242;2.1476;1.8673;1.85 -;-;-;-;-;-;-;-;-;- 510 1 1.517 72204.3 1.0 13460 5131 18592 HBL1_DMSO_200M_050219_2,18593 HBL1_DMSO_200M_050219_2,18593,LLPHYPNWF True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18594 99.967 405.0 415510.0 25 0 48949.0 + 1141 AGVMHLFYV 9 143 518.7676063256127 1035.5206597180254 2 518.7684203982353 MULTI CID FTMS 0 0 0 18592 269485.21875 0.6423111090983994 4 -0.28204345703125 2 Unmodified _AGVMHLFYV_ ENSG00000176170|ENST00000592299|SPHK1;nc|ENSG00000176170|Q9NYA1-2|SPHK1;nc|ENSG00000176170|Q9NYA1-3|SPHK1 36.46614268402704 0.0948557732959553 4 [H{I|L}]MN{I|L}{M(Oxidation (M))|F}YV 8 4 + 59.659 0.0 0.0 5.7612 5.7612 80.348 0.0 0.0 0.0 6.478174818886373 13.155980316589364 6.478174818886373 5.563025007672877 0 0.805462187404089 0.744727494896694 0.0 0.0 [H{I|L}]MN{I|L}{M(Oxidation (M))|F}YV;[H{I|L}]M{M(Oxidation (M))|F}VGAYV;[HM]{I|L}N{I|L}{M(Oxidation (M))|F}YV;[H{I|L}]MN{M(Oxidation (M))|F}{I|L}YV;[H{I|L}]M{M(Oxidation (M))|F}VQYV;[H{I|L}]M{M(Oxidation (M))|F}GVAYV;[H{I|L}]MGG{I|L}{M(Oxidation (M))|F}YV;[H{I|L}]MVGA{M(Oxidation (M))|F}YV;[H{I|L}]MVQ{M(Oxidation (M))|F}YV;[H{I|L}]M{M(Oxidation (M))|F}N{I|L}YV 5.7612;5.224;5.1356;4.9451;4.8891;4.8839;4.8668;4.8397;4.7955;4.6544 -;-;-;-;-;-;-;-;-;- 4876 1 1.517 129338.5 1.0 13461 5131 18592 HBL1_DMSO_200M_050219_2,18594 HBL1_DMSO_200M_050219_2,18594,AGVMHLFYV True True AGVMHLFYV 99.967405 518.768420398235 6443873.5 18592.0 ENSG00000176170|ENST00000592299|SPHK1;;nc|ENSG00000176170|Q9NYA1-2|SPHK1;;nc|ENSG00000176170|Q9NYA1-3|SPHK1 5.985293388366699 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18595 99.975 421.0 377270.0 25 0 48619.0 + 1866 ALVPVFAHL 9 101 483.7921463300899 965.5697397269798 2 483.7927734255791 MULTI CID FTMS 0 0 0 18592 178075.1875 0.1243424047216198 -4 0.1248550415039062 3 Unmodified _ALVPVFAHL_ ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 56.04830969593885 0.0282699710924866 4 [{I|L}A]VPV{M(Oxidation (M))|F}AH{I|L} 9 0 + 71.38 0.0 0.0 7.3926 7.3926 91.503 0.0 0.0 0.0 20.28782221775522 11.962724883926654 11.962724883926654 9.503187623076954 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + + [{I|L}A]VPV{M(Oxidation (M))|F}AH{I|L};[{I|L}A]V{I|L}{[ET]|[MV]}AH{I|L} 7.3926;6.4083 +;- + 352 + 1 1.517 122674.2 1.0 13462 5131 18592 HBL1_DMSO_200M_050219_2,18595 HBL1_DMSO_200M_050219_2,18595,ALVPVFAHL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18596 99.989 800.0 197420.0 25 0 35061.0 + + 1724 ALPQFFNNV 9 121 1050.5253924332112 1049.5181159666113 1 1050.523974597454 MULTI CID FTMS 0 0 0 18592 113093.71875 0.4101333449381042 6 -0.4185409545898437 4 Oxidation (M) _ALPQFINTM(Oxidation (M))_ ENSG00000169919|ENST00000304895|GUSB;nc|ENSG00000169919|P08236-2|GUSB;nc|ENSG00000169919|P08236-3|GUSB 60.07390631473393 0.0260411565414776 4 [QP]{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}NDV 9 -1 + 76.785 0.0 0.0 7.3162 7.3162 86.583 0.0 0.0 0.0 21.993559221610965 16.478174818886373 16.478174818886373 6.109243748081781 0 0.7302046884880937 1.5228787452803376 0.0 1.3441876774005248 [QP]{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}NDV;[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}A{I|L}NDV;[QP]{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}NDV;[QP]{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}GGDV;[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND[{I|L}A]V;[QP][{I|L}A]{M(Oxidation (M))|F}{M(Oxidation (M))|F}NDV;[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}A{I|L}GGDV;[QP]{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}GGDV;[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}N[{I|L}A]DV;[QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}GGD[{I|L}A]V 7.3162;6.7341;6.4473;6.4388;6.2852;5.9137;5.8567;5.5699;5.4561;5.4079 -;-;-;-;-;-;-;-;-;- 3817 1 1.517 101759.9 0.5600000023841858 13463 5131 18592 HBL1_DMSO_200M_050219_2,18596 HBL1_DMSO_200M_050219_2,18596,ALPQFINTM False False ALPQFFNNV 99.988761 1050.52397459745 0.0 18592.0 ENSG00000169919|ENST00000304895|GUSB;;nc|ENSG00000169919|P08236-2|GUSB;;nc|ENSG00000169919|P08236-3|GUSB 0.3913015921910603 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18597 100.0 800.0 173670.0 25 0 26846.0 + 40744 VLIKMKLHR 9 111 379.91316497892 1136.71766553696 3 379.9132568240166 MULTI CID FTMS 0 0 0 18592 101306.5078125 0.9739643655773064 -2 0.0736770629882812 5 Unmodified _VLIKMKLHR_ REV__ENST00000229179.8_1_12:69082797-69084434:+|nuORF;REV__ENST00000540453.5_1_12:69082797-69083453:+|nuORF 10.799506525563784 0.5443532743200366 4 {I|L}{I|L}HR 4 -1 48.66 0.0 0.0 4.2807 0.0 0.0 599.3792739693223 0.0 599.3792739693223 0.0 39.19592522764098 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.8979400086720375 {I|L}{I|L}HR 4.2807 - 118 + 1 1.517 114114.4 0.3799999952316284 13464 5131 18592 HBL1_DMSO_200M_050219_2,18597 HBL1_DMSO_200M_050219_2,18597,VLIKMKLHR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18599 100.01 311.0 264200.0 25 0 21394.0 31769 RSEFNDAIV 9 111 525.7659321165862 1049.5173112999723 2 525.7664672732353 MULTI CID FTMS 0 0 0 18598 162728.3125 0.2040334098299377 8 -0.4543228149414062 1 Unmodified _RSEFNDAIV_ ENSG00000215041|ENST00000399464|NEURL4;nc|ENSG00000215041|Q96JN8-2|NEURL4 29.081581746732265 0.1611639662936252 4 [QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 6 6 51.559 0.0 0.0 4.9127 0.0 0.0 0.0 298.1768107199094 298.1768107199094 18.184501419963787 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 1.4604093769761877 [QP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 4.9127 - 545 1 1.526 71858.0 1.0 13465 5132 18598 HBL1_DMSO_200M_050219_2,18599 HBL1_DMSO_200M_050219_2,18599,RSEFNDAIV False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18600 100.01 94.0 1112500.0 25 0 149970.0 + 16221 IVLPEDLQL 9 115 520.3048221275433 1038.5950913218865 2 520.3055908083916 MULTI CID FTMS 0 0 0 18598 456754.0 0.2672318612477629 -2 0.0909423828125 2 Unmodified _IVLPEDLQL_ ENSG00000115392|ENST00000233741|FANCL;nc|ENSG00000115392|Q9NW38-2|FANCL 54.773552608820026 0.0299037012502309 4 [{I|L}V]{I|L}E{I|L}[DP]Q{I|L} 9 3 + 59.636 0.0 0.0 5.742 5.742 87.253 0.0 0.0 0.0 13.985219493190456 13.985219493190456 13.985219493190456 13.985219493190456 0 1.3494850021680094 1.6989700043360187 0.4247425010840047 1.305462187404089 [{I|L}V]{I|L}E{I|L}[DP]Q{I|L};[EP]D{I|L}{I|L}V{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}PD{I|L}V{I|L}Q{I|L};[{I|L}P]ED{I|L}V{I|L}Q{I|L};[EP]D{I|L}GA{I|L}V{I|L}{I|L};[EP]D{I|L}V{I|L}{I|L}Q{I|L};[EP]D{I|L}Q{I|L}V{I|L}{I|L};[EP]D{I|L}{I|L}VQ{I|L}{I|L};[EP]{I|L}D{I|L}V{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}PDGA{I|L}V{I|L}{I|L} 5.742;4.3955;4.1218;3.9435;3.9339;3.7665;3.7644;3.7644;3.7225;3.6603 -;-;-;-;-;-;-;-;-;- 1093 + 1 1.526 86732.0 1.0 13466 5132 18598 HBL1_DMSO_200M_050219_2,18600 HBL1_DMSO_200M_050219_2,18600,IVLPEDLQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18601 100.02 587.0 240370.0 25 0 31968.0 + + 37169 KTIDYIQFL 9 134 570.8183021082375 1139.622051283275 2 570.8178588747978 MULTI CID FTMS 0 0 0 18598 131254.28125 0.4178312005072703 -3 0.1222152709960937 3 Unmodified _TIDKYLQIF_ ENST00000588320.1_1_17:40720799-40723580:+|nuORF;ENSG00000108788|ENST00000435881|MLX;nc|ENSG00000108788|Q9UH92-2|MLX;nc|ENSG00000108788|Q9UH92|MLX 47.74868867922204 0.0453060283459952 4 {[QN]|[E{I|L}]|[KN]}SKY{I|L}Q{M(Oxidation (M))|F}{I|L} 9 -1 + 81.546 0.0 0.0 7.1555 7.1555 79.603 0.0 0.0 0.0 1.7691811143078129 16.478174818886373 1.7691811143078129 1.7691811143078129 0 0.8807196863200843 1.0457574905606752 1.6628264524336147 0.25 {[QN]|[E{I|L}]|[KN]}SKY{I|L}Q{M(Oxidation (M))|F}{I|L};[{I|L}T]KDY{I|L}Q{M(Oxidation (M))|F}{I|L};[{I|L}T]DKY{I|L}Q{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SKYQ{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}T]KDYQ{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SKY{I|L}[AG]{M(Oxidation (M))|F}{I|L};[{I|L}T]DKYQ{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}T]KDY{I|L}[AG]{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}SYK{I|L}Q{M(Oxidation (M))|F}{I|L};[{I|L}T]DKY{I|L}[AG]{M(Oxidation (M))|F}{I|L} 7.1555;7.0003;6.9415;6.5392;6.3839;6.3475;6.3252;6.1923;6.1386;6.1335 -;-;-;-;-;-;-;-;-;- 2206 1 1.526 108007.9 1.0 13467 5132 18598 HBL1_DMSO_200M_050219_2,18601 HBL1_DMSO_200M_050219_2,18601,TIDKYLQIF False False KTIDYIQFL 100.02448 570.817858874798 2856504.5 18598.0 ENST00000588320.1_1_17:40720799-40723580:+|nuORF;;ENSG00000108788|ENST00000435881|MLX;;nc|ENSG00000108788|Q9UH92-2|MLX;;nc|ENSG00000108788|Q9UH92|MLX 4.214740514755249 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18602 100.03 261.0 219140.0 25 0 25180.0 + 39343 VAFSQVLTI 9 95 489.2862840615309 976.558015189862 2 489.2867919802666 MULTI CID FTMS 0 0 0 18598 128174.6328125 0.1185326944949185 11 -0.5516357421875 4 Unmodified _VAFSQVLTI_ ENSG00000104976|ENST00000221573|SNAPC2 34.10243960390752 0.1078313939113124 4 V{[WN]|[YH]}T{I|L} 5 6 25.758 0.0 0.0 2.6376 0.0 0.0 345.22338103947976 0.0 345.22338103947976 0.0 12.99344959195583 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.0 V{[WN]|[YH]}T{I|L} 2.6376 - 400 + 1 1.526 50902.6 1.0 13468 5132 18598 HBL1_DMSO_200M_050219_2,18602 HBL1_DMSO_200M_050219_2,18602,VAFSQVLTI True True VAFSQVLTI 100.02931 489.286791980267 18289798.0 18598.0 ENSG00000104976|ENST00000221573|SNAPC2 3.633661905924479 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18603 100.04 800.0 211260.0 25 0 35200.0 + 8264 EQIKDIFYI 9 153 584.8165455293607 1167.6185381255214 2 584.8165771365166 MULTI CID FTMS 0 0 0 18598 119368.3828125 0.1970006103231566 -3 0.1222152709960937 5 Unmodified _EQIKDIFYI_ ENSG00000164902|ENST00000297540|PHAX 76.82478488871298 0.0184607444814265 4 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KQE{I|L}Y{I|L} 9 5 + 61.891 0.0 0.0 5.3006 5.3006 77.576 0.0 0.0 0.0 10.028349515315456 16.478174818886373 10.028349515315456 4.771212547196626 0 0.5 1.3010299956639813 1.1307196863200843 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KQE{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{M(Oxidation (M))|F}QE{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KY{I|L}QE{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KQEY{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}YQE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K[AG]E{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}R[QT]{I|L}Y{I|L};[AG]E{I|L}[QP]{I|L}AQE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[QP]{I|L}AQE{I|L} 5.3006;4.892;4.8067;4.7166;4.5549;4.5489;4.512;4.5013;4.4417;4.4041 -;-;-;-;-;-;-;-;-;- 7670 1 1.526 127424.0 0.4799999892711639 13469 5132 18598 HBL1_DMSO_200M_050219_2,18603 HBL1_DMSO_200M_050219_2,18603,EQIKDIFYI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18605 100.05 43.0 2089300.0 25 0 287670.0 + 1823 ALTELLAKI 9 91 486.3103246248441 970.6060963164882 2 486.3106567263603 MULTI CID FTMS 0 0 0 18604 1482946.25 0.067674929605026 10 -0.5110626220703125 1 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 92.4914307365334 0.0139747738690111 4 [{I|L}A]TE{I|L}{I|L}K{I|L}A 9 2 + 76.335 0.0 0.0 7.8646 7.8646 95.42 0.0 0.0 0.0 9.67982735125345 43.61432819416656 9.67982735125345 21.852875112906176 0 2.3935078169319297 2.0 1.1307196863200843 0.0 [{I|L}A]TE{I|L}{I|L}K{I|L}A;{[QN]|[E{I|L}]|[KN]}TA{I|L}{I|L}K{I|L}A;[{I|L}A]{I|L}ET{I|L}K{I|L}A;{[ET]|[MV]}{I|L}A{I|L}{I|L}K{I|L}A;[{I|L}T]AE{I|L}{I|L}K{I|L}A;{[QN]|[E{I|L}]|[KN]}T{I|L}A{I|L}K{I|L}A;[{I|L}T]EA{I|L}{I|L}K{I|L}A;{[ET]|[MV]}{I|L}{I|L}A{I|L}K{I|L}A;{[ET]|[MV]}A{I|L}{I|L}{I|L}K{I|L}A;[{I|L}T]E{I|L}A{I|L}K{I|L}A 7.8646;5.6132;5.5339;5.2133;4.8442;4.8391;4.764;4.4392;4.1802;3.9899 -;-;-;-;-;-;-;-;-;- 842 1 1.526 74733.2 1.0 13470 5133 18604 HBL1_DMSO_200M_050219_2,18605 HBL1_DMSO_200M_050219_2,18605,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18606 100.05 253.0 453330.0 25 0 56244.0 + -1 FIVPVCPFS 9 104 533.2765639167626 1064.538574900325 2 533.2773315310478 MULTI CID FTMS 0 0 0 18604 312603.1875 0.2849174069225748 10 -0.5110626220703125 2 Carbamidomethyl (C) _FIVPVC(Carbamidomethyl (C))PFS_ REV__ENST00000336023.9_1_12:49521584-49521680:-|nuORF 23.1484247019978 0.2366544122328345 4 [{I|L}P]GV{M(Oxidation (M))|F}{I|L} 6 -1 30.621 0.0 0.0 2.8765 0.0 0.0 0.0 435.1363891915939 435.1363891915939 8.877720968065006 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 [{I|L}P]GV{M(Oxidation (M))|F}{I|L} 2.8765 - 386 1 1.526 95040.8 1.0 13471 5133 18604 HBL1_DMSO_200M_050219_2,18606 HBL1_DMSO_200M_050219_2,18606,FIVPVCPFS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18607 100.06 198.0 385130.0 25 0 49809.0 + 22528 LPWESMPSL 9 112 530.2625147709357 1058.5104766086713 2 530.2628661990166 MULTI CID FTMS 0 0 0 18604 213431.5 0.5341767775955425 5 -0.3859481811523437 3 Unmodified _LPWESMPSL_ ENSG00000135476|ENST00000257934|ESPL1;nc|ENSG00000135476|Q14674-2|ESPL1 67.34385681178166 0.0221257235307089 4 [PS]MPS{I|L}MPS{I|L} 10 4 + 64.601 0.0 0.0 6.103 6.103 73.233 0.0 0.0 0.0 0.5064407783890346 20.11484602226524 0.5064407783890346 0.5064407783890346 0 1.1435078169319297 1.0 1.2530834337684311 0.0 [PS]MPS{I|L}MPS{I|L};[WP]ES{I|L}MPS{I|L};[PS]MP{I|L}SMPS{I|L};[WP]E{I|L}SMPS{I|L};[PS]MPSM{I|L}PS{I|L};[WP]ESM{I|L}PS{I|L};[WP]{I|L}ESMPS{I|L};[{I|L}P]WESMPS{I|L};[WE]PS{I|L}MPS{I|L};[WE]P{I|L}SMPS{I|L} 6.103;6.0551;6.0277;5.9799;5.6053;5.5575;5.5291;5.1267;4.8576;4.7823 -;-;-;-;-;-;-;+;-;- + 1069 1 1.526 70956.8 1.0 13472 5133 18604 HBL1_DMSO_200M_050219_2,18607 HBL1_DMSO_200M_050219_2,18607,LPWESMPSL True True LPWESMPSL 100.05646 530.2638 6860055.0 18604.0 nc|ENSG00000135476|Q14674-2|ESPL1;;ENSG00000135476|ENST00000257934|ESPL1 4.992323716481526 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18608 100.06 220.0 649830.0 25 0 75472.0 + 24527 MISELLPLN 9 111 515.2869059422316 1028.559258951263 2 515.2861816287041 MULTI CID FTMS 0 0 0 18604 195946.640625 0.3601724025227665 -3 0.1315155029296875 4 Unmodified _MISELLPLN_ REV__ENST00000066544.7_1_17:45197960-45198047:-|nuORF 67.34385681178166 0.0221257235307089 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SE{I|L}{I|L} 6 -1 47.176 0.0 0.0 4.5866 0.0 0.0 0.0 339.16751025425054 339.16751025425054 18.58202039200647 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.6056270500406935 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SE{I|L}{I|L} 4.5866 + + 1412 1 1.526 116056.6 1.0 13473 5133 18604 HBL1_DMSO_200M_050219_2,18608 HBL1_DMSO_200M_050219_2,18608,MISELLPLN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18609 100.07 267.0 252660.0 25 0 14501.0 + 10106 FPVFSKGAP 9 95 949.5175808834016 948.5103044168014 1 949.517626941204 MULTI CID FTMS 0 0 0 18604 136156.921875 1.0 0 0.0 5 Unmodified _FPVFSKGAP_ REV__nc|ENSG00000286140|P0CG12|DERPC 42.09456458481378 0.0639583784996157 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VG{M(Oxidation (M))|F}{I|L}NGV 9 -1 + 77.387 0.0 0.0 8.1588 8.1588 82.196 0.0 0.0 0.0 16.70818753952375 10.285371682087217 10.285371682087217 1.949237304209888 0 1.25 1.3010299956639813 0.0 0.805462187404089 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VG{M(Oxidation (M))|F}{I|L}NGV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R{M(Oxidation (M))|F}{I|L}NGV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R{M(Oxidation (M))|F}{I|L}GGGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GMV{I|L}NGV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VG{M(Oxidation (M))|F}{I|L}GGGV;[{M(Oxidation (M))|F}V]AMV{I|L}NGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GVM{I|L}NGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GM{I|L}VNGV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R{[MG]|[TS]}VSGV;[{M(Oxidation (M))|F}V]PG{M(Oxidation (M))|F}{I|L}NGV 8.1588;7.9533;6.9768;6.3973;6.3388;6.0363;5.8943;5.8943;5.8182;5.5588 -;-;-;-;-;-;-;-;-;- 3483 1 1.526 50707.3 1.0 13474 5133 18604 HBL1_DMSO_200M_050219_2,18609 HBL1_DMSO_200M_050219_2,18609,FPVFSKGAP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18610 100.08 800.0 122080.0 25 0 13375.0 + 31372 RNSENFWIK 9 134 597.3042393560409 1192.5939257788816 2 597.3047363162041 MULTI CID FTMS 0 0 0 18604 110242.5703125 0.8694398648038336 6 -0.3953018188476562 6 Unmodified _RNSENFWIK_ REV__ENSG00000047365|ENST00000303965|ARAP2;REV__ENST00000508066.1_1_4:36162071-36231213:-|nuORF 33.4449034751529 0.1114409586740657 4 {M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}NWK{I|L} 9 -1 + 72.455 0.0 0.0 6.0754 6.0754 79.643 0.0 0.0 0.0 11.962724883926654 3.979400086720375 3.979400086720375 3.979400086720375 0 2.1989700043360187 0.0 0.0 0.1694451763165201 {M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}NWK{I|L};{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}NW{I|L}K;{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}GGWK{I|L};{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}GGW{I|L}K;{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}N{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}N{[QV]|[N{I|L}]|[RA]|[KV]}TV;{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}[{I|L}P]MS{I|L};{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}GG{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L};{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}N[R{I|L}]{[SA]|[TG]};{M(Oxidation (M))|F}P{I|L}E{M(Oxidation (M))|F}[{I|L}P]TMV 6.0754;5.7417;5.3033;4.9696;3.7799;3.4649;3.0237;3.0115;2.9178;2.829 -;-;-;-;-;-;-;-;-;- 1149 + 1 1.526 75071.5 0.449999988079071 13475 5133 18604 HBL1_DMSO_200M_050219_2,18610 HBL1_DMSO_200M_050219_2,18610,RNSENFWIK False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18611 100.09 800.0 147130.0 25 0 18363.0 + 22675 LPYVGMVTI 9 126 496.7778331665361 991.5411133998722 2 496.7782165408134 MULTI CID FTMS 0 0 0 18604 105544.359375 1.0 0 0.0 7 Unmodified _LPYVGMVTI_ ENSG00000166562|ENST00000587834|SEC11C;ENST00000591406.1_1_18:56822908-56825914:+|nuORF 52.69307289633392 0.0344652456970635 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VGM{I|L}VT{I|L} 9 2 + 56.265 0.0 0.0 5.6745 5.6745 76.328 0.0 0.0 0.0 6.989700043360188 10.330145895351848 6.989700043360188 3.0102999566398125 0 0.8182503180159344 1.2218487496163564 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VGM{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VG{I|L}MVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VGMV{I|L}T{I|L};[{I|L}T]VCM{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAVMVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GMVT{I|L};[{I|L}T]VCMV{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAMVVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GVMVT{I|L};[{I|L}T]VC{I|L}MVT{I|L} 5.6745;5.3709;5.3709;4.9695;4.9695;4.8897;4.6659;4.6659;4.6659;4.6659 -;-;-;-;-;-;-;-;-;- 1157 1 1.526 91730.2 0.4199999868869781 13476 5133 18604 HBL1_DMSO_200M_050219_2,18611 HBL1_DMSO_200M_050219_2,18611,LPYVGMVTI True True LPYVGMVTI 100.09325 496.778216540813 987838.25 18604.0 ENST00000591406.1_1_18:56822908-56825914:+|nuORF;;ENSG00000166562|ENST00000587834|SEC11C 4.343937397003174 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18612 100.11 800.0 216410.0 25 0 26337.0 + -1 LACLCYAGLV 10 192 541.77374412331 1081.53293531342 2 541.7734863162041 MULTI CID FTMS 0 0 0 18604 101696.59375 0.8565551138926922 -2 0.089111328125 8 Carbamidomethyl (C) _LAC(Carbamidomethyl (C))LCYAGLV_ REV__ENSG00000162040|ENST00000454677|HS3ST6 24.67388899826682 0.4143206957119831 4 {I|L}T[KS]G{I|L}[WM]{M(Oxidation (M))|F} 9 -1 + 39.899 0.0 0.0 3.6891 3.6891 72.843 0.0 0.0 0.0 13.11629054940952 0.1579426718323233 0.1579426718323233 6.020599913279625 0 0.4247425010840047 0.8538719643217619 0.0 0.0 {I|L}T[KS]G{I|L}[WM]{M(Oxidation (M))|F};{I|L}T[KS]{I|L}G[WM]{M(Oxidation (M))|F};{I|L}T[KS]AV[WM]{M(Oxidation (M))|F};{I|L}T[KS]VA[WM]{M(Oxidation (M))|F};{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}YCQ{I|L}V;[QA]AV[YK]D[C(Carbamidomethyl (C))K];{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}YCQV{I|L};{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}YC{I|L}QV;{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}YC{I|L}N{I|L};{I|L}{I|L}C{[YC]|[HE]}G[KS][VP] 3.6891;3.1325;3.0429;2.8541;2.098;2.0559;1.494;1.3719;0.76793;0.60925 -;-;-;-;-;-;-;-;-;- 1754 + 1 1.526 133923.9 0.4199999868869781 13477 5133 18604 HBL1_DMSO_200M_050219_2,18612 HBL1_DMSO_200M_050219_2,18612,LACLCYAGLV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18613 100.12 800.0 162780.0 25 0 23922.0 + 44486 YPALIGNLV 9 142 480.2813073162953 958.5480616993906 2 480.2816955447197 MULTI CID FTMS 0 0 0 18604 98193.3515625 0.6114715005972778 -12 0.4470748901367187 9 Unmodified _YPALIGNLV_ ENSG00000242485|ENST00000344843|MRPL20;nc|ENSG00000242485|Q9BYC9-2|MRPL20 49.66892048692302 0.0410958345688192 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}{I|L}GN{I|L}V 9 0 + 56.297 0.0 0.0 5.8731 5.8731 72.745 0.0 0.0 0.0 0.6694678963061307 14.973024840566469 0.6694678963061307 0.6694678963061307 0 0.4247425010840047 1.0 0.0 0.4247425010840047 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}{I|L}GN{I|L}V;[PA]{I|L}Y{I|L}GN{I|L}V;[PA]{I|L}{I|L}YGN{I|L}V;[PA]Y{I|L}{I|L}GN{I|L}V;[PA]{I|L}G{I|L}YN{I|L}V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}AVN{I|L}V;[PA]{I|L}YAVN{I|L}V;[{I|L}A]PY{I|L}GN{I|L}V;[PA]{I|L}{I|L}GYN{I|L}V;[{I|L}A]P{I|L}YGN{I|L}V 5.8731;5.8033;5.4892;5.3055;5.1752;5.1007;5.0309;4.9602;4.8611;4.6462 +;-;-;-;-;-;-;-;-;- + 1692 1 1.526 103853.5 0.7900000214576721 13478 5133 18604 HBL1_DMSO_200M_050219_2,18613 HBL1_DMSO_200M_050219_2,18613,YPALIGNLV True True YPALIGNLV 100.1209 480.28169554472 3484341.25 18604.0 nc|ENSG00000242485|Q9BYC9-2|MRPL20;;ENSG00000242485|ENST00000344843|MRPL20 4.383973916371663 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18614 100.14 800.0 151050.0 25 0 12532.0 + 36666 TAYLFSRFV 9 139 552.2978924668425 1102.581232000485 2 552.2982055544853 MULTI CID FTMS 0 0 0 18604 92022.3671875 0.4432064529262163 4 -0.3294296264648437 10 Unmodified _TAYLFSRFV_ ENSG00000184575|ENST00000332707|XPOT 24.99096001346401 0.2132109383330889 4 [TA]Y{I|L}{M(Oxidation (M))|F}SR{M(Oxidation (M))|F}V 9 0 + 56.609 0.0 0.0 5.1342 5.1342 84.52 0.0 0.0 0.0 25.52999317828121 4.948500216800937 4.948500216800937 13.433342816702016 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + + [TA]Y{I|L}{M(Oxidation (M))|F}SR{M(Oxidation (M))|F}V;[TA]Y{I|L}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L};[TA]Y{I|L}V[WH]T{I|L};[TA]Y{M(Oxidation (M))|F}[{I|L}A][RV]Y;{[QN]|[E{I|L}]|[KN]}[HK]{M(Oxidation (M))|F}{I|L}Y[PG];{[QN]|[E{I|L}]|[KN]}PPA{M(Oxidation (M))|F}{I|L}Y[PG];{[QN]|[E{I|L}]|[KN]}P[{I|L}V]C{I|L}Y[PG];[{I|L}V][HA]S{M(Oxidation (M))|F}{I|L}Y[PG];{[QN]|[E{I|L}]|[KN]}[HK]{M(Oxidation (M))|F}{I|L}[PG]Y;{[QN]|[E{I|L}]|[KN]}PPA{M(Oxidation (M))|F}{I|L}[PG]Y 5.1342;3.9159;3.555;3.2478;3.2011;3.1768;2.6551;2.5985;2.5828;2.5585 +;-;-;-;-;-;-;-;-;- + 658 + 1 1.526 94393.2 0.4000000059604645 13479 5133 18604 HBL1_DMSO_200M_050219_2,18614 HBL1_DMSO_200M_050219_2,18614,TAYLFSRFV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18615 100.15 800.0 137860.0 25 0 30212.0 -1 0 106 688.0731739034812 2748.2635897475247 4 688.5754272341728 MULTI CID FTMS 0 0 0 18604 86665.671875 0.031646698967971 28 -1.2937164306640625 11 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 47.626 0.0 0.0 1.7329 0.0 0.0 0.0 1806.716175204643 1806.716175204643 24.020315121734228 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.25 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.7329 - 956 1 1.526 86314.1 0.4099999964237213 13480 5133 18604 HBL1_DMSO_200M_050219_2,18615 HBL1_DMSO_200M_050219_2,18615, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18617 100.16 38.0 2044200.0 25 0 272870.0 + 16450 KAIEVLLTL 9 87 500.3262066640169 998.637860394834 2 500.3263122439384 MULTI CID FTMS 0 0 0 18616 1636287.0 1.0 0 0.0 1 Unmodified _KAIEVLLTL_ ENSG00000163507|ENST00000295746|CIP2A;ENST00000487834.5_1_3:108281971-108308222:-|nuORF;nc|ENSG00000163507|Q8TCG1-2|CIP2A 69.10491478415734 0.0214449631113747 4 [{I|L}T]{I|L}NV{I|L}{I|L}T{I|L} 9 3 + 97.379 0.0 0.0 9.7512 9.7512 93.834 0.0 0.0 0.0 10.395906230238126 16.478174818886373 10.395906230238126 9.208187539523747 0 0.9247425010840048 1.5228787452803376 2.129854553292708 0.0 [{I|L}T]{I|L}NV{I|L}{I|L}T{I|L};[{I|L}T]{I|L}GGV{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}AKV{I|L}{I|L}T{I|L};[{I|L}T]{I|L}N{I|L}V{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}VAK{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}V{I|L}AK{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}AVK{I|L}{I|L}T{I|L};{I|L}{I|L}TNV{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{I|L}NV{I|L}T{I|L};[{I|L}A]EKV{I|L}{I|L}T{I|L} 9.7512;8.8291;8.7101;8.622;8.2959;8.2474;8.1196;8.0351;7.9344;7.8797 -;-;-;-;-;-;-;-;-;- 1328 1 1.536 64084.8 1.0 13481 5134 18616 HBL1_DMSO_200M_050219_2,18617 HBL1_DMSO_200M_050219_2,18617,KAIEVLLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18618 100.16 97.0 830520.0 25 0 77201.0 + 45650 YVPPELITL 9 85 522.8020859192114 1043.5896189052228 2 522.8028442263603 MULTI CID FTMS 0 0 0 18616 459269.71875 0.584723916011533 1 -0.0860519409179687 2 Unmodified _YVPPELITL_ ENSG00000119718|ENST00000266126|EIF2B2;ENST00000556668.1_1_14:75473249-75475888:+|nuORF 36.04419817259434 0.0971720506436186 4 {[QN]|[E{I|L}]|[KN]}PP{I|L}YVT{I|L} 9 5 + 50.524 0.0 0.0 4.8414 4.8414 70.58 0.0 0.0 0.0 13.427572685152718 1.7765207793702302 1.7765207793702302 1.7765207793702302 0 0.8182503180159344 1.5228787452803376 0.0 0.0 {[QN]|[E{I|L}]|[KN]}PP{I|L}YVT{I|L};{[QN]|[E{I|L}]|[KN]}PP{I|L}T{I|L}YV;{[QN]|[E{I|L}]|[KN]}PPY{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}PPYV{I|L}T{I|L};[EP]P{I|L}{I|L}YVT{I|L};{[HG]|PP}E{I|L}{I|L}YVT{I|L};[EP]P{I|L}{I|L}T{I|L}YV;[EP]{I|L}P{I|L}YVT{I|L};{[HG]|PP}E{I|L}{I|L}T{I|L}YV;[EP]{I|L}P{I|L}T{I|L}YV 4.8414;4.6712;4.2645;3.8073;3.5547;3.426;3.3845;3.2663;3.2557;3.096 -;-;-;-;-;-;-;-;-;- 330 1 1.536 66772.3 1.0 13482 5134 18616 HBL1_DMSO_200M_050219_2,18618 HBL1_DMSO_200M_050219_2,18618,YVPPELITL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18619 100.16 151.0 482000.0 25 0 55530.0 19337 LEMVKAAQAL 10 86 537.3048493182582 1072.5951457033163 2 537.3051635622978 MULTI CID FTMS 0 0 0 18616 313619.09375 0.7478384483535396 2 -0.1718215942382812 3 Unmodified _LEMVKAAQAL_ ENSG00000167880|ENST00000301607|EVPL 16.149105407346934 0.5765757077271437 4 {[QN]|[E{I|L}]|[KN]}A[{I|L}A]M{I|L}EA{I|L} 10 6 + 63.862 0.0 0.0 5.9539 5.9539 78.536 0.0 0.0 0.0 16.655462488490684 41.89896278884483 16.655462488490684 3.521825181113627 0 0.9247425010840048 1.2218487496163564 0.0 0.0 {[QN]|[E{I|L}]|[KN]}A[{I|L}A]M{I|L}EA{I|L};{[QN]|[E{I|L}]|[KN]}[RV]M{I|L}EA{I|L} 5.9539;5.6256 -;- 102 1 1.536 60965.2 1.0 13483 5134 18616 HBL1_DMSO_200M_050219_2,18619 HBL1_DMSO_200M_050219_2,18619,LEMVKAAQAL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18620 100.16 219.0 392280.0 25 0 119740.0 + 20393 LLGSEIKLI 9 83 493.3184903194121 984.6224277056242 2 493.3184997439384 MULTI CID FTMS 0 0 0 18616 286531.15625 0.4074755907864713 -2 0.1474533081054687 4 Unmodified _LLGSEIKLI_ ENSG00000133138|ENST00000357242|TBC1D8B;nc|ENSG00000133138|Q0IIM8-2|TBC1D8B;nc|ENSG00000133138|Q0IIM8-3|TBC1D8B 57.47134341890925 0.0274820932774257 4 {I|L}{I|L}GSSG{I|L}{I|L}{I|L}{I|L} 10 3 + 72.094 0.0 0.0 7.322 7.322 61.311 0.0 0.0 0.0 11.686326126853857 16.53212513775344 11.686326126853857 0.0 0 0.5 1.6989700043360187 1.2302046884880935 0.0 {I|L}{I|L}GSSG{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}GSS{I|L}G{I|L}{I|L}{I|L};{I|L}{I|L}GDTK{I|L}{I|L}{I|L};{I|L}{I|L}GSEK{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}D{I|L}TK{I|L}{I|L}{I|L};{I|L}{I|L}[KT]DG{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}{I|L}SS{I|L}G{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}{I|L}SSG{I|L}{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}{I|L}DTK{I|L}{I|L}{I|L};{I|L}{I|L}GK{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{I|L} 7.322;7.322;7.228;6.7435;6.1351;5.9771;5.9233;5.9233;5.8293;5.6714 -;-;-;-;-;-;-;-;-;- 892 1 1.536 69232.6 1.0 13484 5134 18616 HBL1_DMSO_200M_050219_2,18620 HBL1_DMSO_200M_050219_2,18620,LLGSEIKLI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18621 100.17 168.0 561730.0 25 0 64433.0 + 34742 SPYPWPLNHI 10 86 612.3143340079008 1222.6141150826015 2 612.3144409060478 MULTI CID FTMS 0 0 0 18616 267957.0 0.6540209944224626 29 -1.2953262329101562 5 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 88.95385435242217 0.009729780394035 4 [PS]YPWP{I|L}V[HQ] 10 2 + 81.621 0.0 0.0 6.676 6.676 75.332 0.0 0.0 0.0 19.67294031092848 0.7918124604762511 0.7918124604762511 0.4845500650402812 0 1.4604093769761874 1.5228787452803376 0.0 1.416386562212267 [PS]YPWP{I|L}V[HQ];[PS]YPW{I|L}PV[HQ];[PS]YPWP{I|L}NH{I|L};[PS]YPW{I|L}PNH{I|L};[PS]YPWP{I|L}[HQ]V;[PS]YPW{I|L}P[HQ]V;[PS]YPWP{I|L}GGH{I|L};[PS]YPW{I|L}PGGH{I|L};[PS]Y{I|L}[WP]PV[HQ];[PS]Y{I|L}[WP]PNH{I|L} 6.676;6.6363;6.6112;6.5716;5.5622;5.5226;4.7031;4.6635;4.2123;4.1476 -;-;+;-;-;-;-;-;-;- + 642 + 1 1.536 71722.4 1.0 13485 5134 18616 HBL1_DMSO_200M_050219_2,18621 HBL1_DMSO_200M_050219_2,18621,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18622 100.18 800.0 411130.0 25 0 50484.0 + 20446 LLIQLLLDLY 10 99 608.8831886818916 1215.7518244305832 2 608.8832885622978 MULTI CID FTMS 0 0 0 18616 136781.875 0.8619786820274229 -1 0.1068801879882812 6 Unmodified _LLIQLLLDLY_ REV__ENSG00000124486|ENST00000378308|USP9X;REV__nc|ENSG00000124486|Q93008-3|USP9X 1.6526216038709556 0.7189921496796233 4 {I|L} 1 -1 9.6777 0.0 0.0 0.79603 0.0 0.0 1084.65677545773 0.0 1084.65677545773 0.0 0.4083502322566001 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.79603 + + 13 + 1 1.536 240608.8 0.5199999809265137 13486 5134 18616 HBL1_DMSO_200M_050219_2,18622 HBL1_DMSO_200M_050219_2,18622,LLIQLLLDLY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18623 100.2 800.0 199560.0 25 0 21486.0 + 26253 NQLEALVGL 9 135 478.774277346606 955.534001760012 2 478.7742187380791 MULTI CID FTMS 0 0 0 18616 132355.171875 0.5204657489974065 -2 0.1474533081054687 7 Unmodified _NQLEALVGL_ ENSG00000104774|ENST00000456935|MAN2B1;ENST00000466794.5_1_19:12767171-12772081:-|nuORF;nc|ENSG00000104774|O00754-2|MAN2B1 71.13359017698441 0.0206607516130725 4 {[VA]|[{I|L}G]}ANEA{I|L} 7 6 56.546 0.0 0.0 5.9177 0.0 0.0 0.0 284.1599400261884 284.1599400261884 35.001225267834 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.3054621874040891 1.4489700043360187 {[VA]|[{I|L}G]}ANEA{I|L} 5.9177 - 1243 1 1.536 127026.6 0.4699999988079071 13487 5134 18616 HBL1_DMSO_200M_050219_2,18623 HBL1_DMSO_200M_050219_2,18623,NQLEALVGL True True NQLEALVGL 100.19523 478.774218738079 1829981.125 18616.0 ENST00000466794.5_1_19:12767171-12772081:-|nuORF;;ENSG00000104774|ENST00000456935|MAN2B1;;nc|ENSG00000104774|O00754-2|MAN2B1 4.4580996831258135 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18624 100.21 590.0 365340.0 25 0 72245.0 + 25106 MPYNYPVLL 9 171 555.2893585940849 1108.5641642549697 2 555.2890502810478 MULTI CID FTMS 0 0 0 18616 129326.8203125 0.3351141691279202 -3 0.1959915161132812 8 Unmodified _MPYNYPVLL_ ENSG00000102786|ENST00000311234|INTS6;ENSG00000165359|ENST00000639893|INTS6L;nc|ENSG00000102786|Q9UL03-3|INTS6;nc|ENSG00000165359|Q5JSJ4|INTS6L 60.38955033654506 0.025866396858536 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYMPV{I|L}{I|L} 9 2 + 69.886 0.0 0.0 6.3041 6.3041 78.202 0.0 0.0 0.0 6.798989434753011 16.478174818886373 6.798989434753011 2.8429329825632834 0 0.5 0.721246399047171 0.1549471895720985 1.3684151806525389 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NMYPV{I|L}{I|L};[YN]PYMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MNYPV{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}YMPV{I|L}{I|L};[YN]PMYPV{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}MYPV{I|L}{I|L};[{M(Oxidation (M))|F}V]QYMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYPMV{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}YNYPV{I|L}{I|L} 6.3041;6.0477;5.6908;5.6427;5.4483;5.4344;5.1919;5.0954;5.0868;4.8452 -;-;-;-;-;-;-;-;-;+ + 5719 1 1.536 169579.7 1.0 13488 5134 18616 HBL1_DMSO_200M_050219_2,18624 HBL1_DMSO_200M_050219_2,18624,MPYNYPVLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18625 100.21 468.0 170110.0 25 0 22142.0 -1 LLDELICHI 9 116 563.3017982144173 1124.5890434956343 2 563.3021118044853 MULTI CID FTMS 0 0 0 18616 126020.53125 0.9305045711204316 -1 0.1068801879882812 9 Carbamidomethyl (C) _LLDELIC(Carbamidomethyl (C))HI_ ENSG00000006125|ENST00000610402|AP2B1;ENST00000588116.1_1_17:33977635-33977996:+|nuORF;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 9.347437153973935 0.588369872918737 4 [WP]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}T]{I|L}{I|L}{[DS]|[MA]|[CV]|TT} 9 -1 + 29.612 0.0 0.0 2.6331 2.6331 77.269 0.0 0.0 0.0 14.550143450894812 8.529543537615186 8.529543537615186 15.97695185925512 0 0.0 1.3010299956639813 0.0 0.0 [WP]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}T]{I|L}{I|L}{[DS]|[MA]|[CV]|TT};{I|L}{I|L}[YC(Carbamidomethyl (C))]E{I|L}{I|L}{[DS]|[MA]|[CV]|TT};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}P{I|L}[HN]K{I|L} 2.6331;1.2124;0.1872 -;-;- 335 1 1.536 64994.1 1.0 13489 5134 18616 HBL1_DMSO_200M_050219_2,18625 HBL1_DMSO_200M_050219_2,18625,LLDELICHI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18626 100.23 800.0 224620.0 25 0 26193.0 + 45158 YQFNPMESIKL 11 135 685.3446839946799 1368.6748150561598 2 685.3474609255791 MULTI CID FTMS 0 0 0 18616 128858.578125 0.9072058130174224 -1 0.1068801879882812 10 Unmodified _YQFNPMESIKL_ ENSG00000137965|ENST00000370747|IFI44;ENST00000495254.5_1_1:79119932-79128426:+|nuORF 75.94068254845943 0.0151884312905456 4 YQ{M(Oxidation (M))|F}NPMES{I|L}K{I|L} 11 0 + 98.684 0.0 0.0 7.2102 7.2102 88.931 0.0 0.0 0.0 55.103979255028754 10.814321129254765 10.814321129254765 9.128498242810991 0 1.5138793319624575 1.0 1.174742501084005 1.1643943297944483 + + YQ{M(Oxidation (M))|F}NPMES{I|L}K{I|L};YQ{M(Oxidation (M))|F}GGPMES{I|L}K{I|L};Y[AG]{M(Oxidation (M))|F}NPMES{I|L}K{I|L};YQ{M(Oxidation (M))|F}NPME[K{I|L}]S{I|L};Y[AG]{M(Oxidation (M))|F}GGPMES{I|L}K{I|L};YQ{M(Oxidation (M))|F}GGPME[K{I|L}]S{I|L};Y[AG]{M(Oxidation (M))|F}NPME[K{I|L}]S{I|L};YQ{M(Oxidation (M))|F}TY{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}K{I|L};YQ{M(Oxidation (M))|F}TY{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}K{I|L};YQ{M(Oxidation (M))|F}TY{I|L}{[RE]|[WV]}H{I|L} 7.2102;6.5433;5.8126;5.6864;5.1479;5.0194;4.2888;4.1893;3.8986;3.5614 +;-;-;-;-;-;-;-;-;- + 2114 + 1 1.536 130987.0 0.4799999892711639 13490 5134 18616 HBL1_DMSO_200M_050219_2,18626 HBL1_DMSO_200M_050219_2,18626,YQFNPMESIKL True True YQFNPMESIKL 100.2277 685.347460925579 1220231.875 18616.0 ENST00000495254.5_1_1:79119932-79128426:+|nuORF;;ENSG00000137965|ENST00000370747|IFI44 7.943385759989421 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18627 100.24 385.0 235140.0 25 0 51743.0 + 10134 FPWPKVLKI 9 91 376.5708211178986 1126.690633953896 3 376.5704528689384 MULTI CID FTMS 0 0 0 18616 113805.1328125 0.4085638656278615 -26 1.22821044921875 11 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 29.84058131909904 0.1515068451768857 4 {M(Oxidation (M))|F}PW[KP]V{I|L}K{I|L} 9 0 + 32.634 0.0 0.0 2.8965 2.8965 79.283 0.0 0.0 0.0 13.248555809107412 2.324025793069712 2.324025793069712 32.63403101823548 0 0.2887254899964357 0.0 0.0 0.2614393726401688 + + {M(Oxidation (M))|F}PW[KP]V{I|L}K{I|L} 2.8965 + + 179 + 1 1.536 79862.5 1.0 13491 5134 18616 HBL1_DMSO_200M_050219_2,18627 HBL1_DMSO_200M_050219_2,18627,FPWPKVLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18629 100.24 40.0 2192200.0 25 0 304270.0 + 1867 ALVPVFAHL 9 69 483.7921463300899 965.5697397269798 2 483.7924682497978 MULTI CID FTMS 0 0 0 18628 1432135.625 1.0 0 0.0 1 Unmodified _ALVPVFAHL_ ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 45.7499826716795 0.0496882803020414 4 [{I|L}A]VPV{M(Oxidation (M))|F}AH{I|L} 9 0 + 69.307 0.0 0.0 7.1778 7.1778 90.917 0.0 0.0 0.0 16.453650195120844 11.082268588648247 11.082268588648247 9.503187623076954 0 0.8494850021680094 1.6989700043360187 0.0 0.0 + + [{I|L}A]VPV{M(Oxidation (M))|F}AH{I|L};[{I|L}A]V{I|L}{[ET]|[MV]}AH{I|L} 7.1778;6.1936 +;- + 160 + 1 1.544 74603.6 1.0 13492 5135 18628 HBL1_DMSO_200M_050219_2,18629 HBL1_DMSO_200M_050219_2,18629,ALVPVFAHL True True ALVPVFAHL 100.2411 483.792468249798 36620037.0 18628.0 ENST00000597227.5_1_19:50432514-50434160:+|nuORF;;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;;ENST00000423777.6_1_19:50432412-50434160:+|nuORF 8.02432950337728 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18630 100.25 502.0 218150.0 25 0 18186.0 + 20610 LLPHYPNWF 9 123 593.8056971687428 1185.5968414042854 2 593.8060180544853 MULTI CID FTMS 0 0 0 18628 155278.171875 0.3093181239673758 5 -0.2208175659179687 2 Unmodified _LLPHYPNWF_ ENSG00000159596|ENST00000372025|TMEM69 81.86404211737425 0.017065112157077 4 {[WN]|[YH]}P{I|L}{I|L}[NP]W{M(Oxidation (M))|F} 9 4 + 65.089 0.0 0.0 5.49 5.49 86.464 0.0 0.0 0.0 15.105742396127924 16.478174818886373 15.105742396127924 14.911356165197844 0 1.110924374808178 1.2218487496163564 0.0 0.2887254899964357 {[WN]|[YH]}P{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}P[NP]W{I|L}{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y{I|L}{I|L}[NP]W{M(Oxidation (M))|F};[NP]W{I|L}{I|L}[NP]W{M(Oxidation (M))|F};{I|L}{I|L}[NP]W[NP]W{M(Oxidation (M))|F};{[WN]|[YH]}P[NP]{I|L}{I|L}W{M(Oxidation (M))|F};{[WN]|[YH]}[YV][MT]{I|L}{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Y[NP]W{I|L}{I|L}{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{I|L}Y[NP]W{M(Oxidation (M))|F};[NP]W[NP]W{I|L}{I|L}{M(Oxidation (M))|F} 5.49;4.2323;4.2159;4.1237;3.9548;3.5873;3.483;3.2325;2.9075;2.866 -;-;-;-;-;-;-;-;-;- 702 1 1.544 82773.4 1.0 13493 5135 18628 HBL1_DMSO_200M_050219_2,18630 HBL1_DMSO_200M_050219_2,18630,LLPHYPNWF True True LLPHYPNWF 100.24997 593.806018054485 19383790.5 18628.0 ENSG00000159596|ENST00000372025|TMEM69 7.035814126332601 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18631 100.25 100.0 1035100.0 25 0 213880.0 + 1311 AIVDLIHDI 9 78 504.7898647056317 1007.5651764780634 2 504.7900268435478 MULTI CID FTMS 0 0 0 18628 505806.875 0.1271658983307628 -4 0.28204345703125 3 Unmodified _AIVDLIHDI_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 74.42276476219924 0.019389277360085 4 [{I|L}A]VD{I|L}{I|L}{I|L}[HD] 9 2 + 79.094 0.0 0.0 7.85 7.85 79.54 0.0 0.0 0.0 27.147642715192504 0.9049809190439362 0.9049809190439362 0.9049809190439362 0 1.0387254899964358 2.0 1.7614393726401687 0.0 [{I|L}A]VD{I|L}{I|L}{I|L}[HD];[{I|L}A]VD{I|L}{I|L}HD{I|L};[{I|L}A]VHH[YR]{I|L};[{I|L}A]HHV[YR]{I|L} 7.85;7.7602;2.8801;2.12 -;+;-;- + 416 + 1 1.544 83590.8 1.0 13494 5135 18628 HBL1_DMSO_200M_050219_2,18631 HBL1_DMSO_200M_050219_2,18631,AIVDLIHDI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18632 100.26 154.0 687210.0 25 0 90645.0 + 3238 AYASYSSETV 10 121 539.240445378014 1076.466337822828 2 539.2412597537041 MULTI CID FTMS 0 0 0 18628 339559.65625 0.4635170703769501 -2 0.19293212890625 4 Unmodified _AYASYSSETV_ REV__ENSG00000170075|ENST00000367282|GPR37L1 26.88365393820708 0.3646707531412818 4 [{I|L}A]{M(Oxidation (M))|F}{[SA]|[TG]}{M(Oxidation (M))|F}S 7 -1 50.986 0.0 0.0 4.7364 0.0 0.0 0.0 350.08506189517817 350.08506189517817 27.62111929633612 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7742275032520141 0.0 [{I|L}A]{M(Oxidation (M))|F}{[SA]|[TG]}{M(Oxidation (M))|F}S 4.7364 - 253 + 1 1.544 83520.1 1.0 13495 5135 18628 HBL1_DMSO_200M_050219_2,18632 HBL1_DMSO_200M_050219_2,18632,AYASYSSETV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18633 100.26 261.0 233400.0 25 0 33347.0 44964 YPQQIFIQI 9 86 575.3189044386688 1148.6232559441376 2 575.3199951052666 MULTI CID FTMS 0 0 0 18628 168581.125 0.6341643016464115 2 -0.1364974975585937 5 Unmodified _YPQQIFIQI_ ENSG00000105173|ENST00000262643|CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1 26.88365393820708 0.1891292719743517 4 [AG]PQY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L} 10 3 + 51.98 0.0 0.0 4.5254 4.5254 71.583 0.0 0.0 0.0 7.136932611567261 9.699915470362017 7.136932611567261 3.0102999566398125 0 0.5484550065040281 1.5228787452803376 0.0 0.3494850021680094 [AG]PQY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]PQ{I|L}Y{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]PQ{I|L}{M(Oxidation (M))|F}Y{I|L}Q{I|L};[QP]QY{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[QP]Q{I|L}Y{M(Oxidation (M))|F}{I|L}Q{I|L};[QP]Q{I|L}{M(Oxidation (M))|F}Y{I|L}Q{I|L};[AG]P[AG]Y{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]{I|L}[QP]Y{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]{I|L}[QP]{M(Oxidation (M))|F}Y{I|L}Q{I|L};[AG]P[AG]{I|L}Y{M(Oxidation (M))|F}{I|L}Q{I|L} 4.5254;4.2633;4.2526;3.9041;3.642;3.6313;3.4233;3.4171;3.4064;3.1612 -;-;-;-;-;-;-;-;-;- 305 1 1.544 53542.2 1.0 13496 5135 18628 HBL1_DMSO_200M_050219_2,18633 HBL1_DMSO_200M_050219_2,18633,YPQQIFIQI False True KMEQLFLQL 100.26002 575.319995105267 2677376.75 18628.0 ENSG00000167842|ENST00000611091|MIS12 2.334370255470276 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18634 100.27 800.0 303380.0 25 0 14850.0 -1 0 140 917.0955245022128 2748.264744106838 3 917.7637817263604 MULTI CID FTMS 0 0 0 18628 152555.578125 0.0401029700743021 29 -1.2608871459960938 6 4 [H{I|L}]VEA{I|L}HVA 9 -1 29.108 0.0 0.0 1.0591 0.0 0.0 0.0 1775.6818943356068 1775.6818943356068 7.425384235618186 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2302046884880938 0.0 [H{I|L}]VEA{I|L}HVA 1.0591 - 2550 1 1.544 159654.0 0.6000000238418579 13497 5135 18628 HBL1_DMSO_200M_050219_2,18634 HBL1_DMSO_200M_050219_2,18634, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18635 100.29 800.0 197170.0 25 0 14351.0 10140 FPWPKVLKI 9 137 564.3526484918425 1126.690744050485 2 564.8552734255791 MULTI CID FTMS 0 0 0 18628 139695.4375 0.7012010797883058 -6 0.3557205200195312 7 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 36.506200033944 0.094635877243972 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPWV{I|L}K{I|L} 9 2 + 34.177 0.0 0.0 3.0334 3.0334 62.35 0.0 0.0 0.0 0.5727416039788835 0.5727416039788835 0.5727416039788835 0.5727416039788835 0 0.6307196863200843 1.5228787452803376 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPWV{I|L}K{I|L};[WP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{M(Oxidation (M))|F}PK{I|L};[WP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}K[KT]Q;{I|L}{I|L}[KS]KKWPQ;{I|L}{I|L}{M(Oxidation (M))|F}[H{I|L}]{M(Oxidation (M))|F}PK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPWVK{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[H{I|L}]K[KT]Q;[KP]V{I|L}W{M(Oxidation (M))|F}PK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KPWV{I|L}{I|L}K;[WP]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}PK{I|L} 3.0334;2.9826;2.8548;2.7834;2.7154;2.606;2.5876;2.5139;2.4623;2.4482 -;-;-;-;-;-;-;-;-;- 1552 + 1 1.544 121892.4 0.5299999713897705 13498 5135 18628 HBL1_DMSO_200M_050219_2,18635 HBL1_DMSO_200M_050219_2,18635,FPWPKVLKI True True LIFPGEKVLL 100.2877 564.855273425579 3086712.5 18628.0 ENSG00000174177|ENST00000453996|CTU2;;ENST00000566637.5_1_16:88776385-88780917:+|nuORF;;ENST00000565071.1_1_16:88773559-88777122:+|nuORF;;nc|ENSG00000174177|Q2VPK5-5|CTU2 4.87941837310791 2.0 False 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18636 100.29 288.0 405410.0 25 0 55041.0 + 33989 SLILDLKYV 9 119 532.3244114926239 1062.6342700520477 2 532.3242675662041 MULTI CID FTMS 0 0 0 18628 130751.640625 0.6613354018245768 -2 0.19293212890625 8 Unmodified _SLILDLKYV_ ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2 45.69961567697781 0.0497987121815769 4 {[TV]|[{I|L}S]}{I|L}{I|L}D{I|L}KYV 9 0 + 69.58 0.0 0.0 6.5479 6.5479 92.297 0.0 0.0 0.0 33.2319095436452 12.09614293199344 12.09614293199344 30.981362441963327 0 1.274227503252014 2.0 0.3807196863200844 0.0 + + {[TV]|[{I|L}S]}{I|L}{I|L}D{I|L}KYV;{[TV]|[{I|L}S]}{I|L}{I|L}[{M(Oxidation (M))|F}V][TA]S{I|L};{[TV]|[{I|L}S]}{I|L}{I|L}[{M(Oxidation (M))|F}V][TA]TV;{[TV]|[{I|L}S]}{I|L}{I|L}[{M(Oxidation (M))|F}V]{[SA]|[TG]}T{I|L} 6.5479;3.6324;3.6324;3.1215 +;-;-;- + 1781 + 1 1.544 95975.8 1.0 13499 5135 18628 HBL1_DMSO_200M_050219_2,18636 HBL1_DMSO_200M_050219_2,18636,SLILDLKYV True True SLILDLKYV 100.293 532.324267566204 1433734.375 18628.0 nc|ENSG00000024048|Q8IWV8|UBR2;;ENSG00000024048|ENST00000372901|UBR2 3.571040630340576 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18637 100.31 800.0 123810.0 25 0 9885.3 + 24377 MFIDTVISSY 10 148 588.2858602085427 1174.5571674838852 2 588.2855102419853 MULTI CID FTMS 0 0 0 18628 113303.84375 0.5170001008840365 2 -0.1364974975585937 9 Unmodified _MFIDTVISSY_ ENSG00000133863|ENST00000643185|TEX15;nc|ENSG00000133863|Q9BXT5|TEX15 42.09456458481378 0.1354489350322421 4 SY 2 8 20.573 0.0 0.0 1.7516 0.0 0.0 906.450834447732 0.0 906.450834447732 0.0 4.779247159290776 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 + SY 1.7516 + + 914 + 1 1.544 76375.5 0.4699999988079071 13500 5135 18628 HBL1_DMSO_200M_050219_2,18637 HBL1_DMSO_200M_050219_2,18637,MFIDTVISSY False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18638 100.32 800.0 116910.0 25 0 9949.7 + 20602 LLPELRDWGV 10 115 599.334768902364 0 599.3351318240166 PEAK CID FTMS 0 0 0 18628 100042.3984375 1.0 0 0.0 10 Unmodified _LLPELRDWGV_ ENSG00000141994|ENST00000309061|DUS3L;ENST00000589085.5_1_19:5787014-5789688:-|nuORF;nc|ENSG00000141994|Q96G46-2|DUS3L;nc|ENSG00000141994|Q96G46-3|DUS3L 26.268140514670165 0.2477853539698685 4 PE{I|L} 3 7 19.609 0.0 0.0 1.6387 0.0 0.0 226.1674541849445 628.2855318658811 854.4529860508255 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.3807196863200844 0.0 + PE{I|L} 1.6387 + + 162 + 1 1.544 74119.4 0.449999988079071 13501 5135 18628 HBL1_DMSO_200M_050219_2,18638 HBL1_DMSO_200M_050219_2,18638,LLPELRDWGV False True LLPELRDWGV 100.32185 599.335131824017 964944.625 18628.0 ENST00000589085.5_1_19:5787014-5789688:-|nuORF;;nc|ENSG00000141994|Q96G46-2|DUS3L;;ENSG00000141994|ENST00000309061|DUS3L;;nc|ENSG00000141994|Q96G46-3|DUS3L 6.601157983144124 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18640 100.33 38.0 1926800.0 25 0 237710.0 16222 IVLPEDLQL 9 89 520.3048221275433 1038.5950913218865 2 520.3056518435478 MULTI CID FTMS 0 0 0 18639 1016117.0 0.5944969002033768 2 -0.1072463989257812 1 Unmodified _IVLPEDLQL_ ENSG00000115392|ENST00000233741|FANCL;nc|ENSG00000115392|Q9NW38-2|FANCL 46.020951573049366 0.0490941689151868 4 [{I|L}V]{I|L}E{I|L}[DP]Q{I|L} 9 3 + 54.196 0.0 0.0 5.2182 5.2182 85.393 0.0 0.0 0.0 15.145228064085993 14.973024840566469 14.973024840566469 15.718421963928437 0 1.3807196863200843 1.5228787452803376 0.3807196863200844 1.2302046884880935 [{I|L}V]{I|L}E{I|L}[DP]Q{I|L};[{I|L}V]{I|L}E{[DA]|[EG]}{I|L}[PG]{I|L};[{I|L}V]{I|L}E{I|L}{[DA]|[EG]}[PG]{I|L};[EP]D{I|L}{I|L}V{I|L}Q{I|L};[{I|L}V][VS][HM]{I|L}Q{I|L};[{I|L}V]{I|L}E{I|L}[DP][AG]{I|L};{[QN]|[E{I|L}]|[KN]}PD{I|L}V{I|L}Q{I|L};[EP]D{I|L}{I|L}{I|L}VQ{I|L};[EP]{I|L}D{I|L}V{I|L}Q{I|L};[{I|L}P]ED{I|L}V{I|L}Q{I|L} 5.2182;3.7048;3.5353;3.2251;3.1576;3.1472;2.9357;2.4758;2.4114;2.3275 -;-;-;-;-;-;-;-;-;- 758 + 1 1.544 62285.1 1.0 13502 5136 18639 HBL1_DMSO_200M_050219_2,18640 HBL1_DMSO_200M_050219_2,18640,IVLPEDLQL True True VILEIPNQL 100.32694 520.305651843548 0.0 18639.0 ENST00000370812.7_2_1:77634988-77635063:-|nuORF 0.704647189627091 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18641 100.33 72.0 822330.0 25 0 135590.0 + 8265 EQIKDIFYI 9 86 584.8165455293607 1167.6185381255214 2 584.8163940310478 MULTI CID FTMS 0 0 0 18639 471246.375 0.7777254018210055 1 -0.0507278442382812 2 Unmodified _EQIKDIFYI_ ENSG00000164902|ENST00000297540|PHAX 51.629811660486645 0.0367964933207742 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DK{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L} 9 5 + 22.553 0.0 0.0 1.9316 1.9316 61.285 0.0 0.0 0.0 0.7918124604762511 1.930665278408345 0.7918124604762511 0.7918124604762511 0 0.7429928190999391 0.0 0.5 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DK{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F}Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}Y{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}A{I|L}[YR]Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DKY[K{I|L}]{[QN]|[E{I|L}]|[KN]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DK{I|L}[YK]{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[QP]{I|L}[KA]{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[QP]A[K{I|L}]{[QN]|[E{I|L}]|[KN]};[AG]E{I|L}[QP]{I|L}[KA]{[QN]|[E{I|L}]|[KN]} 1.9316;1.8637;1.7993;1.3398;1.2078;1.0751;0.86701;0.85938;0.60156;0.46852 -;-;-;-;-;-;-;-;-;- 238 1 1.544 49310.2 1.0 13503 5136 18639 HBL1_DMSO_200M_050219_2,18641 HBL1_DMSO_200M_050219_2,18641,EQIKDIFYI True True EQIKDIFYI 100.32863 584.816394031048 10103927.0 18639.0 ENSG00000164902|ENST00000297540|PHAX 5.518878936767578 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18642 100.33 73.0 962160.0 25 0 68774.0 + 24530 MISLEIPQV 9 94 515.2869059422316 1028.559258951263 2 515.2864868044853 MULTI CID FTMS 0 0 0 18639 544035.6875 1.0 0 0.0 3 Unmodified _MISLEIPQV_ ENSG00000111231|ENST00000228827|GPN3;nc|ENSG00000111231|Q9UHW5-2|GPN3;nc|ENSG00000111231|Q9UHW5-3|GPN3 85.35673624503755 0.0162188719545379 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SE{I|L}{I|L} 6 4 47.265 0.0 0.0 4.5953 0.0 0.0 0.0 339.1705009769068 339.1705009769068 22.506075764063123 0.0 0.0 0.0 0 0.7396518287104438 1.6989700043360187 1.0994850021680094 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SE{I|L}{I|L} 4.5953 - 477 1 1.544 60621.3 1.0 13504 5136 18639 HBL1_DMSO_200M_050219_2,18642 HBL1_DMSO_200M_050219_2,18642,MISLEIPQV True True MISLEIPQV 100.33035 515.286486804485 6414141.0 18639.0 nc|ENSG00000111231|Q9UHW5-3|GPN3;;nc|ENSG00000111231|Q9UHW5-2|GPN3;;ENSG00000111231|ENST00000228827|GPN3 5.783586819966634 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18643 100.33 162.0 564630.0 25 0 53345.0 + 21506 LPIDDVLRI 9 84 527.3182838536221 1052.622014774044 2 527.3189575076103 MULTI CID FTMS 0 0 0 18639 303246.03125 0.938934314956982 -1 0.0857696533203125 4 Unmodified _LPIDDVLRI_ ENSG00000113851|ENST00000231948|CRBN;ENST00000459840.5_1_3:3192551-3196584:-|nuORF;nc|ENSG00000113851|Q96SW2-2|CRBN 31.26834338654808 0.1333407332142048 4 {I|L}P{I|L}DDV{I|L}R{I|L} 9 0 + 81.178 0.0 0.0 7.712 7.712 94.855 0.0 0.0 0.0 62.9733846117188 9.362915595803017 9.362915595803017 20.000000000000007 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + + {I|L}P{I|L}DDV{I|L}R{I|L};{I|L}P{I|L}D{I|L}[DV]R{I|L};{I|L}P{I|L}{I|L}D[DV]R{I|L};{I|L}{I|L}PDDV{I|L}R{I|L};{I|L}{I|L}PD{I|L}[DV]R{I|L};{I|L}{I|L}P{I|L}D[DV]R{I|L} 7.712;5.812;5.526;5.4841;3.5841;3.2981 +;-;-;-;-;- + 207 + 1 1.544 77554.2 1.0 13505 5136 18639 HBL1_DMSO_200M_050219_2,18643 HBL1_DMSO_200M_050219_2,18643,LPIDDVLRI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18644 100.34 139.0 477350.0 25 0 51245.0 + 39167 TYPEFLANAL 10 93 569.7921425131698 1137.5697320931397 2 569.7927734255791 MULTI CID FTMS 0 0 0 18639 285391.3125 0.2488703642641276 -13 0.6143569946289062 5 Unmodified _TYPEFLANAL_ ENSG00000064703|ENST00000369702|DDX20;ENST00000475700.1_1_1:112303127-112303484:+|nuORF 46.020951573049366 0.1035046897853725 4 [EP]{M(Oxidation (M))|F}{I|L}ANA 7 3 47.083 0.0 0.0 4.1389 0.0 0.0 0.0 392.1799975562832 392.1799975562832 13.63962578990254 0.0 0.0 0.0 0 0.0 1.0 0.0 0.6861818737241735 + [EP]{M(Oxidation (M))|F}{I|L}ANA 4.1389 + + 520 1 1.544 55492.5 1.0 13506 5136 18639 HBL1_DMSO_200M_050219_2,18644 HBL1_DMSO_200M_050219_2,18644,TYPEFLANAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18645 100.34 199.0 438830.0 25 0 50386.0 + 1824 ALTELLAKI 9 111 486.3103246248441 970.6060963164882 2 486.3104431033134 MULTI CID FTMS 0 0 0 18639 264626.28125 0.0120763412397675 13 -0.3553009033203125 6 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 71.92227651296345 0.0203558744033348 4 [{I|L}A]TE{I|L}{I|L}AK{I|L} 9 0 + 86.648 0.0 0.0 8.9272 8.9272 98.996 0.0 0.0 0.0 59.17079371954163 13.46787486224656 13.46787486224656 86.6482846226927 0 1.5994850021680094 2.0 0.0 0.2059771852360797 + + [{I|L}A]TE{I|L}{I|L}AK{I|L} 8.9272 + + 574 + 1 1.544 70049.4 1.0 13507 5136 18639 HBL1_DMSO_200M_050219_2,18645 HBL1_DMSO_200M_050219_2,18645,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18646 100.35 268.0 342740.0 25 0 41924.0 + 31172 RLPEIYIQL 9 65 572.8405595417311 1143.666566150262 2 572.8412353396416 MULTI CID FTMS 0 0 0 18639 200290.0625 0.6872038915751695 -2 0.1718215942382812 7 Unmodified _RLPEIYIQL_ ENSG00000103966|ENST00000220325|EHD4 29.84058131909904 0.1515068451768857 4 {[QN]|[E{I|L}]|[KN]}[RP]{I|L}Y{I|L}Q{I|L} 9 2 + 46.092 0.0 0.0 4.0302 4.0302 69.706 0.0 0.0 0.0 7.336740400816026 28.73589978636623 7.336740400816026 3.0102999566398125 0 0.3807196863200844 0.0 0.6421590589602533 0.0 {[QN]|[E{I|L}]|[KN]}[RP]{I|L}Y{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[RP]Y{I|L}Q{I|L};[R{I|L}][EP]{I|L}Y{I|L}Q{I|L};[VP][W{I|L}]{I|L}Y{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}Y{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[RP]Y{I|L}[AG]{I|L};[R{I|L}][EP]{I|L}Y{I|L}[AG]{I|L};[VP][W{I|L}]{I|L}Y{I|L}[AG]{I|L} 4.0302;3.767;3.3845;3.3148;3.2251;2.9619;2.5793;2.5096 -;-;+;-;-;-;-;- + 108 1 1.544 73158.7 1.0 13508 5136 18639 HBL1_DMSO_200M_050219_2,18646 HBL1_DMSO_200M_050219_2,18646,RLPEIYIQL False True RLPEIYIQL 100.34515 572.841235339642 2189351.0 18639.0 ENSG00000103966|ENST00000220325|EHD4 5.454054673512776 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18647 100.35 274.0 216240.0 25 0 33837.0 + 42618 VTSWGPHY 8 56 473.7225304301092 945.4305079270184 2 473.7228271365166 MULTI CID FTMS 0 0 0 18639 193409.765625 0.6840387882399633 -3 0.2787017822265625 8 Unmodified _VTSWGPHY_ REV__ENST00000581417.5_1_17:62083812-62084084:-|nuORF 8.593279151180031 0.7721714526254883 4 VT 2 -1 24.464 0.0 0.0 2.5876 0.0 0.0 0.0 742.2918332851083 742.2918332851083 12.870156338638594 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 VT 2.5876 + + 15 + 1 1.544 53361.9 1.0 13509 5136 18639 HBL1_DMSO_200M_050219_2,18647 HBL1_DMSO_200M_050219_2,18647,VTSWGPHY False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18648 100.35 176.0 480660.0 25 0 31277.0 + 21342 LPFEVLQHI 9 98 548.313816150649 1094.613079368098 2 548.3132812380791 MULTI CID FTMS 0 0 0 18639 195624.6875 0.2606353116612088 -5 0.3678131103515625 9 Unmodified _LPFEVLQHI_ ENSG00000118496|ENST00000237281|FBXO30 92.65332237495696 0.0139087009896299 4 {I|L}P{M(Oxidation (M))|F}EV{I|L}QH{I|L} 9 0 + 109.82 0.0 0.0 10.033 10.033 89.854 0.0 0.0 0.0 33.46787486224656 5.797835966168094 5.797835966168094 5.797835966168094 0 1.7614393726401687 1.6989700043360187 0.6861818737241735 0.6747425010840047 + + {I|L}P{M(Oxidation (M))|F}EV{I|L}QH{I|L};{I|L}P{M(Oxidation (M))|F}EV{I|L}Q{I|L}H;{I|L}P{M(Oxidation (M))|F}EV{I|L}[AG]H{I|L};{I|L}P{M(Oxidation (M))|F}EV{I|L}[AG]{I|L}H;{I|L}P{[DA]|[EG]}{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}H{I|L};{I|L}P{[DA]|[EG]}{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}H;{I|L}P{[DA]|[EG]}{I|L}{I|L}[HA]{M(Oxidation (M))|F}V 10.033;9.5029;8.5749;8.0452;5.738;5.2083;3.8961 +;-;-;-;-;-;- + 1271 + 1 1.544 71399.0 1.0 13510 5136 18639 HBL1_DMSO_200M_050219_2,18648 HBL1_DMSO_200M_050219_2,18648,LPFEVLQHI True True LPFEVLQHI 100.35363 548.313281238079 12766905.0 18639.0 ENSG00000118496|ENST00000237281|FBXO30 6.122700532277425 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18649 100.36 631.0 198020.0 25 0 20045.0 + 17196 KLLDISELDMV 11 126 638.3465187909359 1274.6784846486717 2 638.3471557497978 MULTI CID FTMS 0 0 0 18639 143238.9375 0.9825139101082532 -3 0.2787017822265625 10 Unmodified _KLLDISELDMV_ ENSG00000185049|ENST00000382882|NELFA;ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF 59.05245873256422 0.0729907235015292 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}SE{I|L}DMV 11 2 + 92.093 0.0 0.0 7.2248 7.2248 84.851 0.0 0.0 0.0 6.312182200691765 16.57577319177794 6.312182200691765 4.771212547196626 0 0.9247425010840048 1.2218487496163564 1.6976212463643423 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}SE{I|L}DMV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}SED{I|L}MV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}SE{I|L}DMV;[K{I|L}]{I|L}D{I|L}SE{I|L}DMV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}KSE{I|L}DMV;{[QN]|[E{I|L}]|[KN]}VK{I|L}SE{I|L}DMV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}SED{I|L}MV;[K{I|L}]{I|L}D{I|L}SED{I|L}MV;{NN|[MP]|[D{I|L}]|[EV]}ES{I|L}[K{I|L}]{I|L}DMV;{NN|[MP]|[D{I|L}]|[EV]}TD{I|L}[K{I|L}]{I|L}DMV 7.2248;6.8505;6.8146;6.7296;6.527;6.4489;6.4403;6.3553;6.2218;6.2183 -;-;-;+;-;-;-;-;-;- + 2404 1 1.544 100178.0 1.0 13511 5136 18639 HBL1_DMSO_200M_050219_2,18649 HBL1_DMSO_200M_050219_2,18649,KLLDISELDMV True True KLLDISELDMV 100.36466 638.347155749798 1255027.375 18639.0 ENST00000463820.5_1_4:1985048-1993691:-|nuORF;;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;;ENSG00000185049|ENST00000382882|NELFA 6.920305411020915 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18650 100.37 444.0 144260.0 25 0 14394.0 -1 0 104 962.4402651498824 1922.8659773665645 2 962.4402343630792 MULTI CID FTMS 0 0 0 18639 114085.859375 0.8095743276004662 -1 0.0857696533203125 11 4 V{I|L}N{I|L}{I|L}M{[QN]|[E{I|L}]|[KN]} 8 -1 28.712 0.0 0.0 1.4932 0.0 0.0 979.3221674073832 0.0 979.3221674073832 0.0 1.1634863610106372 0.0 0.0 0 0.0 0.0 1.613982988912431 0.75 V{I|L}N{I|L}{I|L}M{[QN]|[E{I|L}]|[KN]} 1.4932 - 490 + 1 1.544 50111.5 1.0 13512 5136 18639 HBL1_DMSO_200M_050219_2,18650 HBL1_DMSO_200M_050219_2,18650, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18652 100.39 794.0 195390.0 25 0 18758.0 21987 LPPPFVPTL 9 140 490.7939952375039 979.5734375418078 2 490.7945434451103 MULTI CID FTMS 0 0 0 18651 111656.96875 1.0 0 0.0 1 Unmodified _LPPPFVPTL_ ENSG00000123143|ENST00000242783|PKN1;ENST00000585839.5_1_19:14580313-14582593:+|nuORF;nc|ENSG00000123143|Q16512-2|PKN1 56.541270873467816 0.0279970378729908 4 [{I|L}P]MVP{I|L}TP{I|L} 9 5 + 74.319 0.0 0.0 7.5869 7.5869 82.965 0.0 0.0 0.0 16.232492903979008 14.973024840566469 14.973024840566469 3.0102999566398125 0 0.9247425010840048 2.0 0.0 0.0 [{I|L}P]MVP{I|L}TP{I|L};[{I|L}P]MV{I|L}PTP{I|L};[{I|L}P]MPV{I|L}TP{I|L};[{I|L}P]PMV{I|L}TP{I|L};[{I|L}P]MVPT{I|L}P{I|L};[{I|L}P]MP{I|L}VTP{I|L};[{I|L}P]MPVT{I|L}P{I|L};[{I|L}P]PM{I|L}VTP{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PVP{I|L}TP{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VPP{I|L}TP{I|L} 7.5869;7.2796;7.0998;6.665;6.5894;6.4852;6.1023;6.0504;5.9298;5.8023 -;-;-;-;-;-;-;-;-;- 1038 1 1.544 121048.2 1.0 13513 5137 18651 HBL1_DMSO_200M_050219_2,18652 HBL1_DMSO_200M_050219_2,18652,LPPPFVPTL True True PPFPVLPTL 100.38884 490.79454344511 5310674.0 18651.0 ENST00000361722.7_1_17:45788235-45788682:+|nuORF 2.725849231084188 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18653 100.4 726.0 155470.0 25 0 24696.0 + 16780 KGGGGGGF 8 105 318.6582000758924 635.3018472185848 2 318.6578857302666 MULTI CID FTMS 0 0 0 18651 126624.0703125 1.0 0 0.0 2 Unmodified _KGGGGGGF_ REV__ENST00000428095.1_1_3:196098887-196159300:-|nuORF;REV__ENST00000493566.1_1_3:196127571-196159297:-|nuORF 0.0 0.8243325171867699 4 {I|L} 1 -1 9.732 0.0 0.0 1.5319 0.0 0.0 392.09565322620045 127.09925256900624 519.1949057952068 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.5319 - 4 + 1 1.544 92968.0 1.0 13514 5137 18651 HBL1_DMSO_200M_050219_2,18653 HBL1_DMSO_200M_050219_2,18653,KGGGGGGF False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18654 100.42 800.0 150350.0 25 0 30426.0 -1 0 90 872.4171467820075 3485.63948126163 4 872.6705200076103 MULTI CID FTMS 0 0 0 18651 83083.1328125 0.0051063493481844 -23 1.0210418701171875 3 4 W{I|L}{I|L}[TA]P[Q{I|L}] 8 -1 25.155 0.0 0.0 0.72168 0.0 0.0 2545.10964835323 0.0 2545.10964835323 0.0 11.399451679611996 0.0 0.0 0 0.0 0.0 1.0629529932484498 0.2614393726401688 W{I|L}{I|L}[TA]P[Q{I|L}] 0.72168 - 410 + 1 1.544 88700.9 0.4600000083446502 13515 5137 18651 HBL1_DMSO_200M_050219_2,18654 HBL1_DMSO_200M_050219_2,18654, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18655 100.43 800.0 199530.0 25 0 15216.0 + 12961 HAHPFFFTI 9 137 558.7847500468725 1115.554947160545 2 558.7856323122978 MULTI CID FTMS 0 0 0 18651 83707.1015625 0.3811833241036373 -9 0.518951416015625 4 Unmodified _HAHPFFFTI_ ENSG00000141480|ENST00000269260|ARRB2;ENST00000575131.5_1_17:4619273-4620589:+|nuORF;nc|ENSG00000141480|P32121-2|ARRB2;nc|ENSG00000141480|P32121-3|ARRB2;nc|ENSG00000141480|P32121-5|ARRB2 34.18733598223924 0.1073653526364521 4 [HA]H{M(Oxidation (M))|F}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}T{I|L} 9 2 + 42.778 0.0 0.0 3.8347 3.8347 69.85 0.0 0.0 0.0 3.3583549281704634 6.686859144386261 3.3583549281704634 3.3583549281704634 0 0.7742275032520141 0.958607314841775 0.0 0.0 [HA]H{M(Oxidation (M))|F}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAH{M(Oxidation (M))|F}{M(Oxidation (M))|F}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{M(Oxidation (M))|F}AH{M(Oxidation (M))|F}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}HAH{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[NG]H[YG]T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HA{M(Oxidation (M))|F}H{M(Oxidation (M))|F}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{M(Oxidation (M))|F}{M(Oxidation (M))|F}AHT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}H{M(Oxidation (M))|F}AHT{I|L};[{I|L}T]{M(Oxidation (M))|F}{[CP]|[EA]}NAHT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}H{M(Oxidation (M))|F}A{M(Oxidation (M))|F}HT{I|L} 3.8347;3.5336;3.3758;3.3044;3.2353;3.1059;3.1059;3.0345;2.9919;2.9481 -;-;-;-;-;-;-;-;-;- 1711 1 1.544 122486.0 0.8399999737739563 13516 5137 18651 HBL1_DMSO_200M_050219_2,18655 HBL1_DMSO_200M_050219_2,18655,HAHPFFFTI True True HAHPFFFTI 100.4291 558.785632312298 2107732.5 18651.0 nc|ENSG00000141480|P32121-5|ARRB2;;nc|ENSG00000141480|P32121-3|ARRB2;;ENST00000575131.5_1_17:4619273-4620589:+|nuORF;;ENSG00000141480|ENST00000269260|ARRB2;;nc|ENSG00000141480|P32121-2|ARRB2 7.451948324839274 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18657 100.44 109.0 504800.0 25 0 163540.0 + 18084 KTIDGILLL 9 70 493.3184903194121 984.6224277056242 2 493.3183776736259 MULTI CID FTMS 0 0 0 18656 478362.46875 0.6802786549114801 2 -0.027801513671875 1 Unmodified _KTIDGILLL_ ENSG00000139842|ENST00000375440|CUL4A;ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000139842|Q13619-2|CUL4A;nc|ENSG00000158290|Q13620-3|CUL4B;nc|ENSG00000158290|Q13620|CUL4B 36.506200033944 0.094635877243972 4 {I|L}{I|L}[DG]TK{I|L}{I|L}{I|L} 9 4 + 64.063 0.0 0.0 6.5064 6.5064 77.386 0.0 0.0 0.0 1.7731749024395782 16.478174818886373 1.7731749024395782 1.7731749024395782 0 0.9247425010840048 1.6989700043360187 0.8494850021680094 0.0 {I|L}{I|L}[DG]TK{I|L}{I|L}{I|L};[K{I|L}]TDG{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}[DG]{I|L}[KT]{I|L}{I|L};[K{I|L}]EEK{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RV]{I|L}{I|L}{I|L}{I|L};[K{I|L}]{[QN]|[E{I|L}]|[KN]}[SG]{I|L}{I|L}{I|L} 6.5064;6.3263;4.961;3.6384;3.5195;2.7781 -;-;-;-;-;- 115 1 1.544 46248.9 1.0 13517 5138 18656 HBL1_DMSO_200M_050219_2,18657 HBL1_DMSO_200M_050219_2,18657,KTIDGILLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18658 100.44 161.0 399810.0 25 0 59413.0 + 34188 SLNILLLTL 9 101 500.3262066640169 998.637860394834 2 500.3264648318291 MULTI CID FTMS 0 0 0 18656 306662.15625 0.1874134282372224 4 -0.097564697265625 2 Unmodified _SLNILLLTL_ ENSG00000198886|ENST00000361381|MT-ND4 32.78568957990786 0.1150597335874693 4 [{I|L}T]{I|L}{[NV]|[RG]}{I|L}{I|L}T{I|L} 9 4 + 65.824 0.0 0.0 6.5914 6.5914 85.179 0.0 0.0 0.0 7.001962355242952 14.973024840566469 7.001962355242952 7.001962355242952 0 0.9247425010840048 1.5228787452803376 0.5484550065040282 0.0 [{I|L}T]{I|L}{[NV]|[RG]}{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}V[KA]{I|L}{I|L}T{I|L};[{I|L}T]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}[KA]{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}VRR{I|L}T{I|L};[{I|L}A]K{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}A[K{I|L}]V{I|L}T{I|L};[{I|L}T]{I|L}[KG]{I|L}{I|L}E{I|L};[{I|L}A]K{[QN]|[E{I|L}]|[KN]}V{I|L}T{I|L};[{I|L}A]E[K{I|L}]V{I|L}T{I|L} 6.5914;5.8903;5.6169;5.2362;4.967;4.4948;4.438;4.1435;3.5203;3.2188 -;-;-;-;-;-;-;-;-;- 561 1 1.544 53176.9 1.0 13518 5138 18656 HBL1_DMSO_200M_050219_2,18658 HBL1_DMSO_200M_050219_2,18658,SLNILLLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18660 100.44 102.0 742150.0 25 0 94644.0 + + -1 RILDGMFAI 9 73 518.2859070656428 1034.5572611980856 2 518.2867309451103 MULTI CID FTMS 0 0 0 18659 419104.21875 0.8411429750542204 -1 0.0093536376953125 1 Oxidation (M) _AFITM(Oxidation (M))PRAL_ nc|ENSG00000170445|P12081-3|HARS1;nc|ENSG00000170445|P12081-2|HARS1;nc|ENSG00000170445|P12081-4|HARS1;ENSG00000170445|ENST00000504156|HARS1;ENST00000506579.5_1_5:140056223-140057407:-|nuORF 15.847184025352805 0.4077185912009129 4 GM{M(Oxidation (M))|F}A{I|L} 5 -1 46.766 0.0 0.0 4.5204 0.0 0.0 497.2960908675769 0.0 497.2960908675769 0.0 35.79689690656103 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 GM{M(Oxidation (M))|F}A{I|L} 4.5204 - 62 1 1.544 63175.4 1.0 13519 5139 18659 HBL1_DMSO_200M_050219_2,18660 HBL1_DMSO_200M_050219_2,18660,AFITMPRAL False False RILDGMFAI 100.44324 518.28673094511 3940112.75 18659.0 nc|ENSG00000170445|P12081-3|HARS1;;nc|ENSG00000170445|P12081-2|HARS1;;nc|ENSG00000170445|P12081-4|HARS1;;ENSG00000170445|ENST00000504156|HARS1;;ENST00000506579.5_1_5:140056223-140057407:-|nuORF 4.778648694356282 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18661 100.45 151.0 548610.0 25 0 52791.0 + 37697 TLPDLVPQL 9 97 498.2925479184563 994.5705429037126 2 498.2925598025322 MULTI CID FTMS 0 0 0 18659 440554.875 0.7784228365759713 -8 0.4844131469726562 2 Unmodified _TLPDLVPQL_ ENSG00000163811|ENST00000407426|WDR43 50.855029805455786 0.0384952370514206 4 {[QN]|[E{I|L}]|[KN]}PS{I|L}VPQ{I|L} 9 2 {[QN]|[E{I|L}]|[KN]}PS{I|L}V + + 23.861 25.473 3.9903 2.3992 2.3992 44.978 0.0 0.0 0.0 0.0 3.2265769009186407 0.0 0.0 0 0.0 0.0 0.0 0.6694451763165201 {[QN]|[E{I|L}]|[KN]}PS{I|L}VPQ{I|L} 2.3992 - 226 + 1 1.544 68114.0 1.0 13520 5139 18659 HBL1_DMSO_200M_050219_2,18661 HBL1_DMSO_200M_050219_2,18661,TLPDLVPQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18662 100.45 107.0 685190.0 25 0 68209.0 + 9338 FILEKIEYL 9 95 584.3371290330895 1166.6597051329788 2 584.3367797732353 MULTI CID FTMS 0 0 0 18659 336745.78125 1.0 0 0.0 3 Unmodified _FILEKIEYL_ ENST00000531814.5_1_11:9685687-9746474:+|nuORF 52.268347100219714 0.0353964759249114 4 {[QN]|[E{I|L}]|[KN]}K{I|L}[Y{M(Oxidation (M))|F}]{I|L}{[QN]|[E{I|L}]|[KN]} 9 5 + 50.85 0.0 0.0 4.3586 4.3586 68.783 0.0 0.0 0.0 11.638568026386691 1.8040092401238887 1.8040092401238887 1.8040092401238887 0 0.7742275032520141 1.0 1.5994850021680094 0.0 {[QN]|[E{I|L}]|[KN]}K{I|L}[Y{M(Oxidation (M))|F}]{I|L}{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}K{I|L}EY{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}E{I|L}Y{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}KY{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[QN]|[E{I|L}]|[KN]};[{I|L}T][VG]{I|L}[Y{M(Oxidation (M))|F}]{I|L}{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}KE{I|L}Y{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}T][VG]{I|L}EY{I|L}{M(Oxidation (M))|F}{I|L};[K{I|L}]E{I|L}[Y{M(Oxidation (M))|F}]{I|L}{[QN]|[E{I|L}]|[KN]};[K{I|L}]E{I|L}EY{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}KE{I|L}{I|L}Y{M(Oxidation (M))|F}{I|L} 4.3586;4.204;3.946;3.6501;3.361;3.2736;3.2064;3.1996;3.045;3.0156 -;-;-;-;-;-;-;-;-;- 627 1 1.544 58279.5 1.0 13521 5139 18659 HBL1_DMSO_200M_050219_2,18662 HBL1_DMSO_200M_050219_2,18662,FILEKIEYL True True FILEKIEYL 100.44852 584.336779773235 2778475.75 18659.0 ENST00000531814.5_1_11:9685687-9746474:+|nuORF 4.354555447896321 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18663 100.45 122.0 520610.0 25 0 49970.0 + 34743 SPYPWPLNHI 10 76 612.3143340079008 1222.6141150826015 2 612.3157836794853 MULTI CID FTMS 0 0 0 18659 332507.625 0.8115741240406159 34 -1.4588165283203125 4 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 49.93300154707207 0.0805441195901191 4 [PS]YPW{I|L}PV[HQ] 10 4 + 60.896 0.0 0.0 4.9808 4.9808 76.186 0.0 0.0 0.0 13.322646798160562 4.771212547196626 4.771212547196626 4.771212547196626 0 0.5 1.3979400086720375 0.0 0.7302046884880937 [PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PN[H{I|L}];[PS]YPW{I|L}[WK]{M(Oxidation (M))|F};[PS]YPW{I|L}{[HG]|PP}P{[VA]|[{I|L}G]};[PS]YPW{[HG]|PP}{I|L}P{[VA]|[{I|L}G]};[PS]YPW{I|L}PGG[H{I|L}] 4.9808;4.5905;3.9692;3.5792;3.2537;3.2437 -;-;-;-;-;- 311 + 1 1.544 51691.6 1.0 13522 5139 18659 HBL1_DMSO_200M_050219_2,18663 HBL1_DMSO_200M_050219_2,18663,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18664 100.46 321.0 316700.0 25 0 56912.0 + 15242 IPFVAPPLV 9 78 476.7970304705845 951.5795080079688 2 476.7971984744072 MULTI CID FTMS 0 0 0 18659 162902.6875 0.6639787231752556 -3 0.1166000366210937 5 Unmodified _IPFVAPPLV_ ENSG00000159596|ENST00000372025|TMEM69 56.04830969593885 0.0282699710924866 4 [{I|L}P]{M(Oxidation (M))|F}G{I|L}PP[{I|L}V] 9 2 + 55.384 0.0 0.0 5.8202 5.8202 82.198 0.0 0.0 0.0 13.979400086720377 4.762036441594191 4.762036441594191 6.989700043360188 0 0.7302046884880937 1.6989700043360187 0.0 0.0 [{I|L}P]{M(Oxidation (M))|F}G{I|L}PP[{I|L}V];[{I|L}P]{M(Oxidation (M))|F}VAPP[{I|L}V];[{I|L}P]{M(Oxidation (M))|F}GP{I|L}P[{I|L}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VA{I|L}PP[{I|L}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}G{I|L}PP[{I|L}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}APP[{I|L}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VAP{I|L}P[{I|L}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VAPP[{I|L}V];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}GP{I|L}P[{I|L}V] 5.8202;5.0857;4.5561;4.3512;3.7185;3.6166;3.0871;2.9839;2.4544 -;+;-;-;-;-;-;-;- + 212 1 1.544 83678.8 1.0 13523 5139 18659 HBL1_DMSO_200M_050219_2,18664 HBL1_DMSO_200M_050219_2,18664,IPFVAPPLV True True IPFVAPPLV 100.45689 476.797198474407 13022791.5 18659.0 ENSG00000159596|ENST00000372025|TMEM69 0.3839455048243205 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18666 100.46 183.0 368730.0 25 0 83717.0 + 25107 MPYNYPVLL 9 82 555.2893585940849 1108.5641642549697 2 555.2886840701103 MULTI CID FTMS 0 0 0 18665 371044.875 0.9614586881077118 3 -0.0973129272460937 1 Unmodified _MPYNYPVLL_ ENSG00000102786|ENST00000311234|INTS6;ENSG00000165359|ENST00000639893|INTS6L;nc|ENSG00000102786|Q9UL03-3|INTS6;nc|ENSG00000165359|Q5JSJ4|INTS6L 63.562846038646086 0.0241094678104353 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NMYPV{I|L}{I|L} 9 2 + 66.85 0.0 0.0 6.0303 6.0303 72.882 0.0 0.0 0.0 9.208187539523747 10.330145895351848 9.208187539523747 0.4845500650402812 0 0.8182503180159344 1.0457574905606752 0.0 1.5356668758921828 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NMYPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MNYPV{I|L}{I|L};[YN]PMYPV{I|L}{I|L};[YN]PYMPV{I|L}{I|L};{[WT]|[RM]}SMYPV{I|L}{I|L};{[WT]|[RM]}SYMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGYMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGMYPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MGGYPV{I|L}{I|L} 6.0303;5.9866;5.7588;5.1997;5.156;4.728;4.6843;4.086;3.8144;3.5429 -;-;-;-;-;-;-;-;-;- 548 1 1.544 58171.4 1.0 13524 5140 18665 HBL1_DMSO_200M_050219_2,18666 HBL1_DMSO_200M_050219_2,18666,MPYNYPVLL True True MPYNYPVLL 100.46299 555.28868407011 14309854.5 18665.0 ENSG00000165359|ENST00000639893|INTS6L;;ENSG00000102786|ENST00000311234|INTS6;;nc|ENSG00000102786|Q9UL03-3|INTS6;;nc|ENSG00000165359|Q5JSJ4|INTS6L 5.979869365692139 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18667 100.48 800.0 157060.0 25 0 10499.0 + 15769 ISDVEEDAGEL 11 131 588.7645033009983 1175.5144536687965 2 588.7661620974541 MULTI CID FTMS 0 0 0 18665 89340.734375 0.6099666235223572 -4 0.1350479125976562 2 Unmodified _ISDVEEDAGEL_ ENSG00000117155|ENST00000342203|SSX2IP;ENST00000460500.1_1_1:85123956-85128195:-|nuORF;nc|ENSG00000117155|Q9Y2D8-2|SSX2IP;nc|ENSG00000117155|Q9Y2D8-3|SSX2IP 17.11289562659939 0.6791789249425932 4 [YT][W{I|L}]KM[MT]C 9 11 + 31.101 0.0 0.0 2.6457 2.6457 77.694 0.0 0.0 0.0 8.425026319408747 2.0491079455839376 2.0491079455839376 18.531624224582693 0 0.2396518287104437 1.6989700043360187 0.3494850021680094 0.0 [YT][W{I|L}]KM[MT]C;[YT][EP][QA]GQD[PA];[YT][EP][QA]GNE[PA];{[TV]|[{I|L}S]}DNG[QA][EP][{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}SN[KQ][EP][{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}SNG[QA][EP][{M(Oxidation (M))|F}V] 2.6457;1.0693;0.76978;0.40016;0.31522;0.28001 -;-;-;-;-;- 410 + 1 1.544 96961.9 0.4600000083446502 13525 5140 18665 HBL1_DMSO_200M_050219_2,18667 HBL1_DMSO_200M_050219_2,18667,ISDVEEDAGEL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18668 100.48 354.0 237350.0 25 0 35066.0 + 4036 DALRSILTI 9 117 501.3032265673282 1000.5919002014564 2 501.3033630251884 MULTI CID FTMS 0 0 0 18665 120774.6484375 0.0011226890473261 71 -2.854339599609375 3 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 36.506200033944 0.094635877243972 4 {[QN]|[E{I|L}]|[KN]}AVKD{I|L}T{I|L} 9 6 + 69.359 0.0 0.0 6.9317 6.9317 84.986 0.0 0.0 0.0 5.721740651475642 16.478174818886373 5.721740651475642 5.721740651475642 0 0.9247425010840048 1.5228787452803376 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}AVKD{I|L}T{I|L};[{I|L}T]{I|L}{[NV]|[RG]}D{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}AVK{I|L}DT{I|L};{[QN]|[E{I|L}]|[KN]}AVKS{I|L}E{I|L};[{I|L}T]{I|L}{[NV]|[RG]}{I|L}DT{I|L};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}AAAS{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}A[QT]{I|L}{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}AVK{I|L}SE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}{I|L}T{I|L} 6.9317;6.3599;6.33;5.8303;5.7582;5.7564;5.7106;5.6595;5.5295;5.2893 -;-;-;-;-;-;-;-;-;- 667 1 1.544 67921.5 1.0 13526 5140 18665 HBL1_DMSO_200M_050219_2,18668 HBL1_DMSO_200M_050219_2,18668,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18669 100.49 336.0 248440.0 25 0 27375.0 + 38898 TVLEALQQL 9 108 507.7948331382125 1013.575113343225 2 507.7964050173759 MULTI CID FTMS 0 0 0 18665 113998.984375 0.4680748428573555 -5 0.2208175659179687 4 Unmodified _TVLEALQQL_ ENSG00000163930|ENST00000460680|BAP1 57.47134341890925 0.0274820932774257 4 {[TV]|[{I|L}S]}{I|L}EA{I|L} 6 3 47.101 0.0 0.0 4.647 0.0 0.0 0.0 384.1885467407965 384.1885467407965 10.80198135264581 0.0 0.0 0.0 0 0.0 2.0 1.274227503252014 0.0 + {[TV]|[{I|L}S]}{I|L}EA{I|L} 4.647 + + 824 1 1.544 67603.4 1.0 13527 5140 18665 HBL1_DMSO_200M_050219_2,18669 HBL1_DMSO_200M_050219_2,18669,TVLEALQQL True True TVLEALQQL 100.4893 507.796405017376 1608674.625 18665.0 ENSG00000163930|ENST00000460680|BAP1 4.725359916687012 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18670 100.5 800.0 243030.0 25 0 14608.0 + 21397 LPFYFVQKI 9 176 577.8344690348565 1153.654385136513 2 577.8345214724541 MULTI CID FTMS 0 0 0 18665 99756.9453125 0.1327272813075288 -12 0.603271484375 5 Unmodified _LPFYFVQKI_ ENSG00000059378|ENST00000263549|PARP12 154.46347324262513 0.0105605718140094 4 {I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQK{I|L} 9 0 + 108.36 0.0 0.0 9.3926 9.3926 91.305 0.0 0.0 0.0 33.46787486224656 7.474250108400469 7.474250108400469 7.474250108400469 0 2.010574239612792 1.6989700043360187 0.0 1.9481048713086424 + + {I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQK{I|L};{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQ{I|L}K;{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}V[AG]K{I|L};{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}V[AG]{I|L}K;{I|L}{I|L}MY{M(Oxidation (M))|F}VQK{I|L};{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}V[KA]G{I|L};{I|L}{I|L}MY{M(Oxidation (M))|F}VQ{I|L}K;{I|L}{I|L}MY{M(Oxidation (M))|F}V[AG]K{I|L};{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}V[KA]AV;{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}[KQ]V{I|L} 9.3926;8.7447;8.5944;7.9465;7.8581;7.4916;7.2102;7.0599;6.6828;6.5994 +;-;-;-;-;-;-;-;-;- + 7019 + 1 1.544 153610.0 0.4399999976158142 13528 5140 18665 HBL1_DMSO_200M_050219_2,18670 HBL1_DMSO_200M_050219_2,18670,LPFYFVQKI True True LPFYFVQKI 100.50313 577.834521472454 12330303.0 18665.0 ENSG00000059378|ENST00000263549|PARP12 6.756612618764241 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18671 100.52 800.0 108830.0 25 0 12965.0 + 14858 ILGTEDLIVEV 11 102 600.840451406387 1199.666349879574 2 600.8404418826103 MULTI CID FTMS 0 0 0 18665 90902.8671875 0.7047618684201329 -5 0.2208175659179687 6 Unmodified _ILGTEDLIVEV_ ENSG00000103591|ENST00000261880|AAGAB;ENST00000558725.5_1_15:67519241-67546969:-|nuORF 49.93300154707207 0.1180010809391383 4 {NN|[MP]|[D{I|L}]|[EV]}E{[SA]|[TG]}{I|L}{I|L}{I|L} 8 7 57.713 0.0 0.0 4.8108 0.0 0.0 0.0 342.16883948333594 342.16883948333594 19.24069944090561 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 1.885151878060192 0.0 {NN|[MP]|[D{I|L}]|[EV]}E{[SA]|[TG]}{I|L}{I|L}{I|L} 4.8108 - 661 1 1.544 67046.8 0.4199999868869781 13529 5140 18665 HBL1_DMSO_200M_050219_2,18671 HBL1_DMSO_200M_050219_2,18671,ILGTEDLIVEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18673 100.52 16.0 4493600.0 25 0 910270.0 + 1312 AIVDLIHDI 9 75 504.7898647056317 1007.5651764780634 2 504.7900878787041 MULTI CID FTMS 0 0 0 18672 3479517.25 0.8747922551539766 2 -0.0372543334960937 1 Unmodified _AIVDLIHDI_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 54.773552608820026 0.0299037012502309 4 [{I|L}A]VD{I|L}{I|L}{I|L}[HD] 9 2 + 75.212 0.0 0.0 7.4647 7.4647 80.62 0.0 0.0 0.0 27.147642715192504 1.8962199591150293 1.8962199591150293 1.8962199591150293 0 1.048455006504028 2.0 1.7614393726401687 0.0 [{I|L}A]VD{I|L}{I|L}{I|L}[HD];[{I|L}A]VD{I|L}{I|L}H{NN|[MP]|[D{I|L}]|[EV]};[{I|L}A]HHH{I|L}{I|L}[PA] 7.4647;7.2765;1.2969 -;+;- + 279 + 1 1.544 59939.7 1.0 13530 5141 18672 HBL1_DMSO_200M_050219_2,18673 HBL1_DMSO_200M_050219_2,18673,AIVDLIHDI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18674 100.52 119.0 630350.0 25 0 83032.0 + + -1 FIPYLVVKV 9 97 539.240445378014 1076.466337822828 2 539.2409545779228 MULTI CID FTMS 0 0 0 18672 443445.65625 0.6053270100646242 4 -0.0510940551757812 2 Carbamidomethyl (C) _LACFSC(Carbamidomethyl (C))LTY_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5 18.13498045792455 0.3457906370836843 4 [{I|L}A]{M(Oxidation (M))|F}GT{M(Oxidation (M))|F}S{I|L} 8 -1 55.711 0.0 0.0 5.1754 0.0 0.0 0.0 237.0006960504516 237.0006960504516 32.523656471886326 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.4247425010840047 0.0 [{I|L}A]{M(Oxidation (M))|F}GT{M(Oxidation (M))|F}S{I|L} 5.1754 - 224 + 1 1.544 64036.5 1.0 13531 5141 18672 HBL1_DMSO_200M_050219_2,18674 HBL1_DMSO_200M_050219_2,18674,LACFSCLTY False False FIPYLVVKV 100.52423 539.240954577923 938302.5625 18672.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 -0.2190431555112203 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18675 100.53 116.0 744330.0 25 0 108780.0 + 32516 SALPDIKVLTL 11 94 585.3606989212195 1168.706844909239 2 585.3614379763603 MULTI CID FTMS 0 0 0 18672 475114.75 0.2113024863962403 -10 0.5629196166992188 3 Unmodified _SALPDIKVLTL_ ENSG00000115241|ENST00000344034|PPM1G;ENST00000472077.1_1_2:27604468-27607956:-|nuORF 35.61225514009592 0.279986979807413 4 [DP]{I|L}KV{I|L}T{I|L} 8 3 65.438 0.0 0.0 5.5992 0.0 0.0 0.0 286.14242775519523 286.14242775519523 16.052659518797938 0.0 0.0 0.0 0 0.0 1.0 1.1549471895720984 0.4247425010840047 + [DP]{I|L}KV{I|L}T{I|L} 5.5992 + + 551 1 1.544 70396.9 1.0 13532 5141 18672 HBL1_DMSO_200M_050219_2,18675 HBL1_DMSO_200M_050219_2,18675,SALPDIKVLTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18677 100.54 472.0 229850.0 25 0 28433.0 + 1868 ALVPVFAHL 9 89 483.7921463300899 965.5697397269798 2 483.7928039431572 MULTI CID FTMS 0 0 0 18676 149112.75 0.104119154217674 7 -0.1504898071289062 1 Unmodified _ALVPVFAHL_ ENST00000423777.6_1_19:50432412-50434160:+|nuORF;ENST00000596658.1_1_19:50433558-50434160:+|nuORF;ENST00000597227.5_1_19:50432514-50434160:+|nuORF 56.04830969593885 0.0282699710924866 4 [{I|L}A]VPV{M(Oxidation (M))|F}AH{I|L} 9 0 + 72.4 0.0 0.0 7.4982 7.4982 86.738 0.0 0.0 0.0 21.509782128541133 5.862657241447309 5.862657241447309 5.862657241447309 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + + [{I|L}A]VPV{M(Oxidation (M))|F}AH{I|L};[{I|L}A]VPV{M(Oxidation (M))|F}A{I|L}H;[{I|L}A]V{I|L}{[ET]|[MV]}AH{I|L};[{I|L}A]V{I|L}{[ET]|[MV]}A{I|L}H;[{I|L}A]V[KA][SG]AH{I|L};[{I|L}A]V[KA][SG]A{I|L}H;[{I|L}A]V[KA]{[QS]|[NT]}H{I|L};[{I|L}A]V[KA]{[QS]|[NT]}{I|L}H;[{I|L}A]V{I|L}[KS][QA]H;[{I|L}A]V[KA][HQ]S{I|L} 7.4982;6.891;6.514;5.9068;5.1719;4.5647;4.4954;3.8882;3.5528;3.1711 +;-;-;-;-;-;-;-;-;- + 341 + 1 1.544 88652.9 1.0 13533 5142 18676 HBL1_DMSO_200M_050219_2,18677 HBL1_DMSO_200M_050219_2,18677,ALVPVFAHL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18678 100.54 285.0 310900.0 25 0 69317.0 + 10135 FPWPKVLKI 9 82 376.5708211178986 1126.690633953896 3 376.5706359744072 MULTI CID FTMS 0 0 0 18676 231379.734375 0.8306602379696405 -18 0.7851409912109375 2 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 22.65808497894818 0.2428932432760099 4 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 40.989 0.0 0.0 3.638 3.638 81.466 0.0 0.0 0.0 12.39874158467915 5.661137242139255 5.661137242139255 40.98873742191435 0 0.2887254899964357 0.0 0.0 0.0 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 3.638 + + 179 + 1 1.544 78408.6 1.0 13534 5142 18676 HBL1_DMSO_200M_050219_2,18678 HBL1_DMSO_200M_050219_2,18678,FPWPKVLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18679 100.55 354.0 255000.0 25 0 31240.0 1764 ALRPLIPAL 9 84 482.3210502752388 962.6275476172776 2 482.3211852908134 MULTI CID FTMS 0 0 0 18676 171825.28125 0.7723602954304197 -4 0.097564697265625 3 Unmodified _ALRPLIPAL_ ENST00000506004.5_1_5:141348908-141349118:+|nuORF 42.09456458481378 0.0639583784996157 4 [{I|L}A][RP]{I|L}{I|L}PA{I|L} 9 0 + 54.159 0.0 0.0 5.6262 5.6262 82.263 0.0 0.0 0.0 12.78151250383644 9.934239665113722 9.934239665113722 8.010299956639813 0 1.579689690656103 2.0 0.0 0.0 + + [{I|L}A][RP]{I|L}{I|L}PA{I|L};[{I|L}A][RP]{I|L}P{I|L}A{I|L};[PA][R{I|L}]{I|L}{I|L}PA{I|L};[{I|L}P][R{I|L}]A{I|L}PA{I|L};[PA][R{I|L}]{I|L}P{I|L}A{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}PA{I|L};[{I|L}P][R{I|L}]AP{I|L}A{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}P{I|L}A{I|L} 5.6262;4.7941;4.2984;3.7122;3.4663;3.3995;2.8801;2.5674 +;-;-;-;-;-;-;- + 243 1 1.544 74687.4 1.0 13535 5142 18676 HBL1_DMSO_200M_050219_2,18679 HBL1_DMSO_200M_050219_2,18679,ALRPLIPAL True True ALPRLLPAL 100.54915 482.321185290813 7238119.5 18676.0 nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENSG00000164818|ENST00000297440|DNAAF5 3.488637924194336 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18680 100.55 274.0 291280.0 25 0 14183.0 + 10141 FPWPKVLKI 9 105 564.3526484918425 1126.690744050485 2 564.3529540896416 MULTI CID FTMS 0 0 0 18676 155585.921875 0.7044999634572666 -17 0.7718124389648438 4 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 63.960520009940105 0.0238892913700936 4 {I|L}MWPKV{I|L}K{I|L} 9 2 + 68.815 0.0 0.0 6.1077 6.1077 80.928 0.0 0.0 0.0 16.989700043360187 4.771212547196626 4.771212547196626 4.771212547196626 0 1.1989700043360187 2.0 0.0 0.3494850021680094 {I|L}MWPKV{I|L}K{I|L};{I|L}MWPKV{I|L}{I|L}K;{I|L}MK[WP]V{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}K{I|L};{I|L}MK[WP]V{I|L}{I|L}K;{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K;{M(Oxidation (M))|F}PK[WP]V{I|L}K{I|L};{M(Oxidation (M))|F}PK[WP]V{I|L}{I|L}K;{I|L}N{[WN]|[YH]}KV{I|L}K{I|L};{I|L}[YV]K{I|L}HNK{I|L} 6.1077;5.6842;4.868;4.5998;4.4446;4.1763;3.3601;2.9366;2.5556;2.2054 -;-;-;+;-;-;-;-;-;- + 813 + 1 1.544 67772.4 1.0 13536 5142 18676 HBL1_DMSO_200M_050219_2,18680 HBL1_DMSO_200M_050219_2,18680,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18683 100.57 405.0 243680.0 25 0 29429.0 + 11882 GLVEQLYDL 9 135 525.2803013152283 1048.5460496972564 2 525.2802001833916 MULTI CID FTMS 0 0 0 18682 179392.828125 0.8691836723569828 -2 0.0316085815429687 1 Unmodified _GLVEQLYDL_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000452600.1_1_2:130987586-130988813:+|nuORF;ENST00000477976.5_1_1:880076-889593:-|nuORF 54.773552608820026 0.0299037012502309 4 {NN|[MP]|[D{I|L}]|[EV]}Q{I|L}G{I|L} 6 4 41.92 0.0 0.0 3.9979 0.0 0.0 0.0 406.1657145744627 406.1657145744627 7.883395721713576 0.0 0.0 0.0 0 0.6307196863200843 1.5228787452803376 0.7134679910804405 0.2614393726401688 {NN|[MP]|[D{I|L}]|[EV]}Q{I|L}G{I|L} 3.9979 - 749 1 1.544 78130.9 1.0 13537 5144 18682 HBL1_DMSO_200M_050219_2,18683 HBL1_DMSO_200M_050219_2,18683,GLVEQLYDL True True GLVEQLYDL 100.56805 525.280200183392 1618686.0 18682.0 ENSG00000188976|ENST00000327044|NOC2L;;ENST00000452600.1_1_2:130987586-130988813:+|nuORF;;ENST00000477976.5_1_1:880076-889593:-|nuORF 2.2585984468460083 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18686 100.58 333.0 252900.0 25 0 52553.0 + 40728 VLHYVYLL 8 113 510.3015415238528 1018.5885301145056 2 510.3024169802666 MULTI CID FTMS 0 0 0 18685 64492.86328125 0.0367024065962661 -11 0.3360137939453125 1 Unmodified _VLHYVYLL_ REV__ENSG00000112282|ENST00000368068|MED23;REV__nc|ENSG00000112282|Q9ULK4-3|MED23;REV__nc|ENSG00000112282|Q9ULK4-4|MED23;REV__nc|ENSG00000112282|Q9ULK4-5|MED23 32.45364647766026 0.3613649037604678 4 TMTKPM{I|L}{I|L} 8 -1 46.324 0.0 0.0 4.5478 0.0 0.0 85.08981520820468 0.0 85.08981520820468 0.0 24.862803310950348 0.0 0.0 0 0.5 0.0 0.0 0.0 TMTKPM{I|L}{I|L} 4.5478 - 1179 1 1.544 70223.5 1.0 13538 5146 18685 HBL1_DMSO_200M_050219_2,18686 HBL1_DMSO_200M_050219_2,18686,VLHYVYLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18687 100.59 800.0 304030.0 25 0 27147.0 + 22577 LPWVVAEV 8 107 912.5191523224286 911.5118758558284 1 912.5197631716728 MULTI CID FTMS 0 0 0 18685 186287.46875 0.9851554865057126 -4 0.0454330444335937 2 Unmodified _LPWVVAEV_ ENSG00000065882|ENST00000698857|TBC1D1;nc|ENSG00000065882|Q86TI0-2|TBC1D1;nc|ENSG00000065882|Q86TI0|TBC1D1 120.85680286791232 0.007801462569309 4 [{I|L}P]WVVAEV 8 0 + 82.361 0.0 0.0 9.0357 9.0357 89.147 0.0 0.0 0.0 5.713337517843655 16.40978057358332 5.713337517843655 5.713337517843655 0 1.610924374808178 1.5228787452803376 0.2887254899964357 0.0 + + [{I|L}P]WVVAEV;[WP]{I|L}VVAEV;[WP]V{I|L}VAEV;[{I|L}P]WVG{I|L}EV;{[RE]|[WV]}P{I|L}VAEV;[{I|L}P]VWVAEV;[{I|L}P]WVAVEV;[WP]{I|L}VG{I|L}EV;[WP]VV{I|L}AEV;[WP]V{I|L}G{I|L}EV 9.0357;8.4089;8.404;8.3486;7.9869;7.8883;7.8252;7.7218;7.7169;7.7169 +;-;-;-;-;-;-;-;-;- + 2561 1 1.544 162701.7 0.6700000166893005 13539 5146 18685 HBL1_DMSO_200M_050219_2,18687 HBL1_DMSO_200M_050219_2,18687,LPWVVAEV True True LPWVVAEV 100.59453 912.519763171673 1754170.625 18685.0 ENSG00000065882|ENST00000698857|TBC1D1;;nc|ENSG00000065882|Q86TI0-2|TBC1D1;;nc|ENSG00000065882|Q86TI0|TBC1D1 5.332600434621175 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18688 100.61 634.0 158250.0 25 0 31362.0 + 12318 GSGSKGML 8 102 736.3659620812083 735.3586856146082 1 736.3668701052666 MULTI CID FTMS 0 0 0 18685 106334.90625 0.6823805047950091 9 -0.2223052978515625 3 Unmodified _GSGSKGML_ REV__ENSG00000083750|ENST00000374941|RRAGB;REV__ENSG00000155876|ENST00000380527|RRAGA;REV__nc|ENSG00000083750|Q5VZM2|RRAGB 9.347437153973935 0.7675937258251505 4 {[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}SP{M(Oxidation (M))|F} 6 -1 + 61.08 0.0 0.0 8.3061 8.3061 87.841 0.0 0.0 0.0 5.356216463058274 13.812281309285623 5.356216463058274 5.356216463058274 0 1.2614393726401687 1.154901959985743 1.2302046884880935 0.0 {[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}SP{M(Oxidation (M))|F};{[TV]|[{I|L}S]}WSP{M(Oxidation (M))|F};{[WS]|[C(Carbamidomethyl (C)){I|L}]}S{I|L}P{M(Oxidation (M))|F};{[TV]|[{I|L}S]}C(Carbamidomethyl (C)){I|L}P{M(Oxidation (M))|F};{[TV]|[{I|L}S]}SWP{M(Oxidation (M))|F};[VG]{[ET]|[MV]}SP{M(Oxidation (M))|F};{[VA]|[{I|L}G]}C{I|L}SP{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[CG]{I|L}P{M(Oxidation (M))|F};{[VA]|[{I|L}G]}CS{I|L}P{M(Oxidation (M))|F};[YV]NPP{M(Oxidation (M))|F} 8.3061;7.5777;6.985;6.2567;6.1884;5.7797;5.5883;4.9756;4.8448;4.5275 -;-;-;-;-;-;-;-;-;- 278 1 1.544 73068.2 1.0 13540 5146 18685 HBL1_DMSO_200M_050219_2,18688 HBL1_DMSO_200M_050219_2,18688,GSGSKGML False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18690 100.61 48.0 980570.0 25 0 136920.0 + 39168 TYPEFLANAL 10 72 569.7921425131698 1137.5697320931397 2 569.7930175662041 MULTI CID FTMS 0 0 0 18689 1138574.125 0.9928731002646072 -2 0.0375595092773437 1 Unmodified _TYPEFLANAL_ ENSG00000064703|ENST00000369702|DDX20;ENST00000475700.1_1_1:112303127-112303484:+|nuORF 32.30548876998284 0.2428506522065767 4 [EP]{M(Oxidation (M))|F}{I|L}ANA 7 3 46.431 0.0 0.0 4.0816 0.0 0.0 0.0 392.1809486740127 392.1809486740127 23.32309909402412 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.4247425010840047 + [EP]{M(Oxidation (M))|F}{I|L}ANA 4.0816 + + 358 1 1.544 41247.0 1.0 13541 5147 18689 HBL1_DMSO_200M_050219_2,18690 HBL1_DMSO_200M_050219_2,18690,TYPEFLANAL False True TYPEFLANAL 100.6104 569.793017566204 26178534.0 18689.0 ENST00000475700.1_1_1:112303127-112303484:+|nuORF;;ENSG00000064703|ENST00000369702|DDX20 5.005754629770915 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18691 100.61 83.0 699120.0 25 0 41049.0 + 21343 LPFEVLQHI 9 72 548.313816150649 1094.613079368098 2 548.3137084841728 MULTI CID FTMS 0 0 0 18689 621564.8125 0.828125226390858 6 -0.1422500610351562 2 Unmodified _LPFEVLQHI_ ENSG00000118496|ENST00000237281|FBXO30 66.45667989310934 0.0225072657982126 4 {I|L}P{M(Oxidation (M))|F}EV{I|L}Q{I|L}H 9 2 + 103.4 0.0 0.0 9.4463 9.4463 96.01 0.0 0.0 0.0 63.27745672888028 11.706962271689749 11.706962271689749 13.015384402724592 0 1.5044321917401078 1.6989700043360187 0.6747425010840047 0.3807196863200844 {I|L}P{M(Oxidation (M))|F}EV{I|L}Q{I|L}H;{I|L}P{M(Oxidation (M))|F}EV{I|L}[AG]{I|L}H;{I|L}{I|L}MEV{I|L}Q{I|L}H;{I|L}{I|L}MEV{I|L}[AG]{I|L}H;{I|L}P{M(Oxidation (M))|F}[VP][RH]{[ET]|[MV]};{I|L}P{M(Oxidation (M))|F}[RH][VP]{[ET]|[MV]};{I|L}P{M(Oxidation (M))|F}[VP]P[VP]{[ET]|[MV]};{I|L}{I|L}M[VP][RH]{[ET]|[MV]};{I|L}{I|L}M[RH][VP]{[ET]|[MV]};{I|L}{I|L}M[VP]P[VP]{[ET]|[MV]} 9.4463;8.2573;7.2299;6.0409;3.4656;3.4656;3.4238;1.2492;1.2492;1.2074 -;-;-;-;-;-;-;-;-;- 612 + 1 1.544 54085.0 1.0 13542 5147 18689 HBL1_DMSO_200M_050219_2,18691 HBL1_DMSO_200M_050219_2,18691,LPFEVLQHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18692 100.61 64.0 1321300.0 25 0 67892.0 + 17163 KLILLITQV 9 111 520.8568812488593 1039.6992095645185 2 520.8577148318291 MULTI CID FTMS 0 0 0 18689 608914.125 0.6871171139211688 -4 0.0513992309570312 3 Unmodified _KLILLITQV_ ENSG00000163811|ENST00000407426|WDR43 47.74868867922204 0.0453060283459952 4 {I|L}{I|L}{I|L}K{I|L}{I|L}TQV 9 2 + 42.762 0.0 0.0 4.1129 4.1129 72.708 0.0 0.0 0.0 9.899479462842123 29.48545929579461 9.899479462842123 4.771212547196619 0 0.7619229975844687 0.7958800173440752 0.3494850021680094 0.0 {I|L}{I|L}{I|L}K{I|L}{I|L}TQV;{I|L}{I|L}K{I|L}{I|L}{I|L}TQV;{I|L}{I|L}{I|L}{I|L}K{I|L}TQV;{I|L}{I|L}{I|L}K{I|L}T{I|L}QV;{I|L}{I|L}K{I|L}{I|L}T{I|L}QV;{I|L}{I|L}{I|L}{I|L}KT{I|L}QV;[K{I|L}]{I|L}{I|L}{I|L}{I|L}TQV;[K{I|L}]{I|L}{I|L}{I|L}T{I|L}QV 4.1129;3.654;3.654;3.5338;3.0749;3.0749;2.6388;2.0597 -;-;-;-;-;-;+;- + 351 1 1.544 68393.0 1.0 13543 5147 18689 HBL1_DMSO_200M_050219_2,18692 HBL1_DMSO_200M_050219_2,18692,KLILLITQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18693 100.62 217.0 359500.0 25 0 44952.0 + 2733 ATIEDILFKA 10 94 560.815848061414 1119.617143189628 2 560.8163329958916 MULTI CID FTMS 0 0 0 18689 277545.4375 0.2378422265157737 -9 0.176513671875 4 Unmodified _ATIEDILFKA_ ENSG00000145736|ENST00000274400|GTF2H2;ENSG00000183474|ENST00000380729|GTF2H2C;ENST00000502619.5_1_5:68860950-68874677:+|nuORF;ENST00000507549.7_1_5:69716099-69717567:+|nuORF;ENST00000508065.7_1_5:69716099-69743177:+|nuORF;ENST00000508325.5_1_5:68860950-68862940:+|nuORF;ENST00000521942.5_1_5:70344502-70358599:-|nuORF;ENST00000522654.5_1_5:70344846-70358599:-|nuORF;ENST00000523003.5_1_5:70351153-70358599:-|nuORF 34.93206674587334 0.2110832994570416 4 [TA]{I|L}ED{I|L}{I|L}{M(Oxidation (M))|F}[KA] 10 0 + 70.015 0.0 0.0 6.2535 6.2535 88.308 0.0 0.0 0.0 25.89755485660417 10.157242179326984 10.157242179326984 11.33823530010693 0 0.3494850021680094 1.6989700043360187 0.4247425010840047 0.2887254899964357 + + [TA]{I|L}ED{I|L}{I|L}{M(Oxidation (M))|F}[KA];[TA]{I|L}ED{I|L}{I|L}K{[MS]|[{M(Oxidation (M))|F}A]};[PG]{I|L}P{I|L}{I|L}DE{I|L}[PG];[VP]AP{I|L}{I|L}DE{I|L}[PG];{[QN]|[E{I|L}]|[KN]}D{I|L}[PG][{I|L}P]{I|L}[PG];{NN|[MP]|[D{I|L}]|[EV]}E{I|L}[PG][{I|L}P]{I|L}[PG];{[QN]|[E{I|L}]|[KN]}VE[PG][{I|L}P]{I|L}[PG];{[QN]|[E{I|L}]|[KN]}D[PG]{I|L}[{I|L}P]{I|L}[PG];{NN|[MP]|[D{I|L}]|[EV]}{I|L}E[PG][{I|L}P]{I|L}[PG];[TA]{I|L}[{I|L}P]{I|L}[C(Carbamidomethyl (C))H]PV 6.2535;5.2408;4.5125;3.8665;3.5136;3.0277;2.854;2.5281;2.368;2.0655 +;-;-;-;-;-;-;-;-;- + 587 + 1 1.544 67750.9 1.0 13544 5147 18689 HBL1_DMSO_200M_050219_2,18693 HBL1_DMSO_200M_050219_2,18693,ATIEDILFKA False True ATIEDILFKA 100.61795 560.816332995892 19399434.0 18689.0 ENST00000521942.5_1_5:70344502-70358599:-|nuORF;;ENST00000508325.5_1_5:68860950-68862940:+|nuORF;;ENST00000507549.7_1_5:69716099-69717567:+|nuORF;;ENST00000502619.5_1_5:68860950-68874677:+|nuORF;;ENST00000523003.5_1_5:70351153-70358599:-|nuORF;;ENSG00000183474|ENST00000380729|GTF2H2C;;ENSG00000145736|ENST00000274400|GTF2H2;;ENST00000508065.7_1_5:69716099-69743177:+|nuORF;;ENST00000522654.5_1_5:70344846-70358599:-|nuORF 6.977189699808757 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18694 100.62 184.0 366950.0 25 0 30745.0 + 24528 MISELLPLN 9 89 515.2869059422316 1028.559258951263 2 515.2863647341728 MULTI CID FTMS 0 0 0 18689 181171.1875 0.3330134247856672 11 -0.3747711181640625 5 Unmodified _MISELLPLN_ REV__ENST00000066544.7_1_17:45197960-45198047:-|nuORF 67.34385681178166 0.0221257235307089 4 {[TV]|[{I|L}S]}E{I|L}M{I|L} 6 -1 46.554 0.0 0.0 4.5262 0.0 0.0 0.0 339.1728203128443 339.1728203128443 17.58315119027383 0.0 0.0 0.0 0 0.5 1.154901959985743 1.3516784832448856 0.0 {[TV]|[{I|L}S]}E{I|L}M{I|L} 4.5262 - 458 1 1.544 62215.0 1.0 13545 5147 18689 HBL1_DMSO_200M_050219_2,18694 HBL1_DMSO_200M_050219_2,18694,MISELLPLN False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18695 100.63 391.0 216070.0 25 0 26034.0 + 1825 ALTELLAKI 9 113 486.3103246248441 970.6060963164882 2 486.3108093142509 MULTI CID FTMS 0 0 0 18689 124891.15625 0.0056994649721856 24 -1.2652511596679688 6 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 71.92227651296345 0.0203558744033348 4 [{I|L}A]TE{I|L}{I|L}AK{I|L} 9 0 [{I|L}A] + + 62.226 23.724 12.885 6.4111 6.4111 58.268 0.0 0.0 0.0 0.0 43.298183179851605 0.0 0.0 0 1.555462187404089 0.0 0.0 0.2215141619232908 + + [{I|L}A]TE{I|L}{I|L}AK{I|L} 6.4111 + + 398 + 1 1.544 69127.0 1.0 13546 5147 18689 HBL1_DMSO_200M_050219_2,18695 HBL1_DMSO_200M_050219_2,18695,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18696 100.64 405.0 270780.0 25 0 92033.0 -1 0 68 756.4298772247657 755.4226007581657 1 756.4301025271416 MULTI CID FTMS 0 0 0 18689 114146.8515625 0.5125450215194023 9 -0.227935791015625 7 4 [W{I|L}]{I|L}P{NN|[MP]|[D{I|L}]|[EV]} 6 -1 + 40.678 0.0 0.0 5.3847 5.3847 77.492 0.0 0.0 0.0 19.59523834026633 2.0193091132104968 2.0193091132104968 4.471580313422194 0 0.8494850021680094 1.154901959985743 0.75 0.0 [W{I|L}]{I|L}P{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}G{I|L}P{NN|[MP]|[D{I|L}]|[EV]};[W{I|L}]{I|L}E[VP];{[QN]|[E{I|L}]|[KN]}G{I|L}E[VP] 5.3847;4.7928;4.5685;2.8462 -;-;-;- 251 + 1 1.544 85007.1 1.0 13547 5147 18689 HBL1_DMSO_200M_050219_2,18696 HBL1_DMSO_200M_050219_2,18696, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18698 100.64 346.0 248920.0 25 0 61132.0 + 30113 QVIQSLIAL 9 107 492.8080146167927 983.6014763003852 2 492.8083984255791 MULTI CID FTMS 0 0 0 18697 176075.03125 0.5086449035584374 -8 0.178863525390625 1 Unmodified _QVIQSLIAL_ ENSG00000185651|ENST00000342192|UBE2L3;ENSG00000236444|ENST00000635918|UBE2L5;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 54.773552608820026 0.0299037012502309 4 [{I|L}A]GSVQ{I|L} 7 6 48.738 0.0 0.0 4.9551 0.0 0.0 0.0 312.1950647329615 312.1950647329615 5.318656555439532 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.6989700043360187 0.2742275032520141 [{I|L}A]GSVQ{I|L} 4.9551 - 889 1 1.544 71848.6 1.0 13548 5148 18697 HBL1_DMSO_200M_050219_2,18698 HBL1_DMSO_200M_050219_2,18698,QVIQSLIAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18699 100.65 264.0 333340.0 25 0 62483.0 + 8274 EQLAVLLQL 9 104 513.8139731229898 1025.6133933127794 2 513.8136474490166 MULTI CID FTMS 0 0 0 18697 186335.046875 0.9537879129608284 -2 0.0636672973632812 2 Unmodified _EQLAVLLQL_ ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH;nc|ENSG00000134444|Q9P260|RELCH 37.97399986684836 0.0865783450051559 4 [{I|L}V]ND{I|L}V 6 7 47.612 0.0 0.0 4.6423 0.0 0.0 0.0 369.2159433239819 369.2159433239819 26.76956392083058 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 1.0994850021680094 [{I|L}V]ND{I|L}V 4.6423 - 576 1 1.544 70126.9 1.0 13549 5148 18697 HBL1_DMSO_200M_050219_2,18699 HBL1_DMSO_200M_050219_2,18699,EQLAVLLQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18700 100.66 800.0 174490.0 25 0 14248.0 + 21507 LPIDDVLRI 9 134 527.3182838536221 1052.622014774044 2 527.3196899294853 MULTI CID FTMS 0 0 0 18697 104739.15625 0.3243016487879132 11 -0.4359283447265625 3 Unmodified _LPIDDVLRI_ ENSG00000113851|ENST00000231948|CRBN;ENST00000459840.5_1_3:3192551-3196584:-|nuORF;nc|ENSG00000113851|Q96SW2-2|CRBN 36.506200033944 0.094635877243972 4 {I|L}P{I|L}DDV{I|L}R{I|L} 9 0 + 83.855 0.0 0.0 7.9663 7.9663 94.687 0.0 0.0 0.0 67.4109403091822 13.46787486224656 13.46787486224656 15.039237471316298 0 0.7302046884880937 2.0 0.0 0.0 + + {I|L}P{I|L}DDV{I|L}R{I|L};{I|L}{I|L}PDDV{I|L}R{I|L} 7.9663;6.5375 +;- + 589 + 1 1.544 114138.4 0.9800000190734864 13550 5148 18697 HBL1_DMSO_200M_050219_2,18700 HBL1_DMSO_200M_050219_2,18700,LPIDDVLRI True True LPIDDVLRI 100.66329 527.319689929485 7887826.5 18697.0 nc|ENSG00000113851|Q96SW2-2|CRBN;;ENST00000459840.5_1_3:3192551-3196584:-|nuORF;;ENSG00000113851|ENST00000231948|CRBN 4.454331080118815 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18701 100.68 800.0 94968.0 25 0 14834.0 -1 0 91 1156.0347071468036 0 1156.028613269329 PEAK CID FTMS 0 0 0 18697 62226.8515625 0.9017747160979568 -1 0.0301513671875 4 4 DVVY 4 -1 10.662 0.0 0.0 0.46154 0.0 0.0 1171.4770548191948 659.2863863580686 1830.7634411772635 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DVVY 0.46154 - 63 + 1 1.544 54317.1 0.4099999964237213 13551 5148 18697 HBL1_DMSO_200M_050219_2,18701 HBL1_DMSO_200M_050219_2,18701, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18704 100.69 269.0 370140.0 25 0 56017.0 + 1530 ALITRIFGV 9 80 495.3107794988407 988.6070060644814 2 495.3111144900322 MULTI CID FTMS 0 0 0 18703 199559.265625 0.5105545635051506 5 -0.113189697265625 1 Unmodified _ALITRIFGV_ ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;ENST00000436947.1_1_2:43711555-43732871:-|nuORF;nc|ENSG00000115970|Q6YHU6-3|THADA 41.95555342248728 0.0647214845423414 4 [{I|L}A]{I|L}TR{I|L}{M(Oxidation (M))|F}GV 9 0 + 69.063 0.0 0.0 6.9859 6.9859 94.925 0.0 0.0 0.0 55.96455617469936 12.587418566968154 12.587418566968154 69.06349996614132 0 1.9731975075880328 2.0 0.0 0.0 + + [{I|L}A]{I|L}TR{I|L}{M(Oxidation (M))|F}GV 6.9859 + + 147 + 1 1.544 82470.7 1.0 13552 5150 18703 HBL1_DMSO_200M_050219_2,18704 HBL1_DMSO_200M_050219_2,18704,ALITRIFGV True True ALITRIFGV 100.68872 495.311114490032 2867022.75 18703.0 ENSG00000115970|ENST00000405975|THADA;;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;;ENST00000436947.1_1_2:43711555-43732871:-|nuORF;;nc|ENSG00000115970|Q6YHU6-3|THADA 6.06057612101237 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18705 100.7 800.0 172780.0 25 0 15544.0 + 25616 NFPEHIFPAL 10 127 592.8085179881461 1183.6024830430922 2 592.8079101443291 MULTI CID FTMS 0 0 0 18703 85684.34375 0.0138964365345523 -17 0.6380615234375 2 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 47.7319792270244 0.0934623409360514 4 {[YC]|[HE]}P{I|L}{M(Oxidation (M))|F}N{M(Oxidation (M))|F} 7 7 54.059 0.0 0.0 4.5673 0.0 0.0 0.0 296.1604433634987 296.1604433634987 34.002311968681354 0.0 0.0 0.0 0 0.8807196863200843 1.3010299956639813 0.3252574989159953 0.805462187404089 {[YC]|[HE]}P{I|L}{M(Oxidation (M))|F}N{M(Oxidation (M))|F} 4.5673 - 1049 1 1.544 106704.9 0.4099999964237213 13553 5150 18703 HBL1_DMSO_200M_050219_2,18705 HBL1_DMSO_200M_050219_2,18705,NFPEHIFPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18706 100.72 800.0 212490.0 25 0 20055.0 + 11571 NVIPDEVLQTL 11 160 620.8463959446294 1239.6782389560587 2 620.8449584841728 MULTI CID FTMS 0 0 0 18703 94331.6953125 0.6108574203264447 -7 0.1269989013671875 3 Unmodified _GKEYYIEILL_ ENST00000497929.1_1_3:124951187-125011317:-|nuORF;ENSG00000163848|ENST00000360647|ZNF148 34.40172386719151 0.2166836008404837 4 [DP]EV{I|L}QT{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]} 11 8 + 49.333 0.0 0.0 3.9795 3.9795 67.923 0.0 0.0 0.0 10.555173278498296 9.987137222839507 9.987137222839507 2.174413775404261 0 0.0 0.7958800173440752 1.4255872241892045 0.3252574989159953 [DP]EV{I|L}QT{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};[DP]EV{I|L}NV{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[DP]EV{I|L}QT{I|L}T[KP];[DP]EV{I|L}QH{M(Oxidation (M))|F}KK;[DP]{I|L}D{I|L}QT{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};[DP]{I|L}D{I|L}NV{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};[DP]{I|L}D{I|L}QT{I|L}T[KP];[DP]{I|L}D{I|L}QH{M(Oxidation (M))|F}KK;[DP]E{I|L}VQT{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};[Q{I|L}]T[NP]QT{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]} 3.9795;3.8041;3.7271;3.562;3.5406;3.3652;3.2882;3.1231;3.1189;3.0757 -;-;-;-;-;-;-;-;-;- 14122 1 1.544 126671.8 0.4199999868869781 13554 5150 18703 HBL1_DMSO_200M_050219_2,18706 HBL1_DMSO_200M_050219_2,18706,GKEYYIEILL False False NVIPDEVLQTL 100.71639 620.844958484173 1590729.75 18703.0 ENST00000497929.1_1_3:124951187-125011317:-|nuORF;;ENSG00000163848|ENST00000360647|ZNF148 3.5029314359029136 2.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18708 100.72 102.0 769130.0 25 0 82325.0 + 37698 TLPDLVPQL 9 89 498.2925479184563 994.5705429037126 2 498.2924072146416 MULTI CID FTMS 0 0 0 18707 520717.21875 0.9200628513606292 4 -0.0780105590820312 1 Unmodified _TLPDLVPQL_ ENSG00000163811|ENST00000407426|WDR43 50.855029805455786 0.0384952370514206 4 [{I|L}T]Q 3 6 28.178 0.0 0.0 2.8332 0.0 0.0 0.0 649.3576577320907 649.3576577320907 1.4252015712115274 0.0 0.0 0.0 0 0.0 2.0 0.2134679910804404 0.4247425010840047 [{I|L}T]Q 2.8332 - 253 1 1.544 66015.6 1.0 13555 5151 18707 HBL1_DMSO_200M_050219_2,18708 HBL1_DMSO_200M_050219_2,18708,TLPDLVPQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18709 100.73 294.0 379270.0 25 0 68368.0 + 15243 IPFVAPPLV 9 80 476.7970304705845 951.5795080079688 2 476.7972900271416 MULTI CID FTMS 0 0 0 18707 243707.765625 0.9933339561852348 9 -0.5140380859375 2 Unmodified _IPFVAPPLV_ ENSG00000159596|ENST00000372025|TMEM69 45.7499826716795 0.0496882803020414 4 [{I|L}P]{M(Oxidation (M))|F}G{I|L}P 6 5 46.247 0.0 0.0 4.8601 0.0 0.0 0.0 324.1928549743944 324.1928549743944 19.08030623340529 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.0 0.0 [{I|L}P]{M(Oxidation (M))|F}G{I|L}P 4.8601 - 242 1 1.544 91778.7 1.0 13556 5151 18707 HBL1_DMSO_200M_050219_2,18709 HBL1_DMSO_200M_050219_2,18709,IPFVAPPLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18711 100.73 263.0 424030.0 25 0 62760.0 + 34744 SPYPWPLNHI 10 86 612.3143340079008 1222.6141150826015 2 612.3146240115166 MULTI CID FTMS 0 0 0 18710 211318.46875 0.5157794536873719 47 -2.146766662597656 1 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 74.92900055777586 0.0187778523875693 4 [PS]YPW{I|L}PV[HQ] 10 4 + 74.147 0.0 0.0 6.0646 6.0646 74.76 0.0 0.0 0.0 19.31627155200665 1.3353890837021538 1.3353890837021538 1.3353890837021538 0 0.9247425010840048 1.5228787452803376 0.0 1.3807196863200843 [PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PNH{I|L};[PS]YPWP{I|L}V[HQ];[PS]YPWP{I|L}NH{I|L};[PS]Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}HV[HQ];[PS]Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}HNH{I|L};[PS]YPW{I|L}PGGH{I|L};[PS]Y{I|L}[WP]PV[HQ];[PS]Y{I|L}[WP]PNH{I|L};[PS]YPWP{I|L}GGH{I|L} 6.0646;5.9554;5.7637;5.6544;4.3463;4.2371;4.0765;3.9989;3.8897;3.7755 -;-;-;+;-;-;-;-;-;- + 462 + 1 1.544 89613.4 1.0 13557 5152 18710 HBL1_DMSO_200M_050219_2,18711 HBL1_DMSO_200M_050219_2,18711,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18712 100.75 800.0 346490.0 25 0 16255.0 + 38624 TTFEDFVAI 9 121 1042.5090271519318 1041.501750685332 1 1042.509936511517 MULTI CID FTMS 0 0 0 18710 196722.078125 0.3836345021443861 -5 0.120941162109375 2 Unmodified _TTFEDFVAI_ ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A 85.35673624503755 0.0162188719545379 4 [{M(Oxidation (M))|F}E]DTT{M(Oxidation (M))|F}VA{I|L} 9 4 + 78.961 0.0 0.0 7.5815 7.5815 85.781 0.0 0.0 0.0 4.771212547196626 14.97302484056646 4.771212547196626 4.771212547196626 0 0.4916440611282626 0.0 2.5451140161145327 0.0 [{M(Oxidation (M))|F}E]DTT{M(Oxidation (M))|F}VA{I|L};{[{M(Oxidation (M))|F}D]|MM}ETT{M(Oxidation (M))|F}VA{I|L};[{M(Oxidation (M))|F}E]DTTV{M(Oxidation (M))|F}A{I|L};[{M(Oxidation (M))|F}T]TED{M(Oxidation (M))|F}VA{I|L};[{M(Oxidation (M))|F}E]DT{M(Oxidation (M))|F}TVA{I|L};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}VA{I|L};[{M(Oxidation (M))|F}E]TDT{M(Oxidation (M))|F}VA{I|L};[{M(Oxidation (M))|F}T]EDT{M(Oxidation (M))|F}VA{I|L};{[{M(Oxidation (M))|F}D]|MM}ETTV{M(Oxidation (M))|F}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}TT{M(Oxidation (M))|F}VA{I|L} 7.5815;7.1234;6.8846;6.7186;6.6978;6.6587;6.6042;6.5662;6.4265;6.4001 -;-;-;-;-;+;-;-;-;- + 16662 1 1.544 173380.1 0.6700000166893005 13558 5152 18710 HBL1_DMSO_200M_050219_2,18712 HBL1_DMSO_200M_050219_2,18712,TTFEDFVAI True True TTFEDFVAI 100.74786 1042.50993651152 3766183.5 18710.0 nc|ENSG00000196504|O75400-3|PRPF40A;;ENSG00000196504|ENST00000545856|PRPF40A;;nc|ENSG00000196504|O75400|PRPF40A;;nc|ENSG00000196504|O75400-2|PRPF40A 6.410070896148682 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18714 100.75 58.0 1099700.0 25 0 70023.0 + 21398 LPFYFVQKI 9 84 577.8344690348565 1153.654385136513 2 577.8346435427666 MULTI CID FTMS 0 0 0 18713 658043.5 0.8755312671562598 1 -0.0159683227539062 1 Unmodified _LPFYFVQKI_ ENSG00000059378|ENST00000263549|PARP12 81.61307344734483 0.0171259190214613 4 {I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQK{I|L} 9 0 + 90.602 0.0 0.0 7.8535 7.8535 87.738 0.0 0.0 0.0 33.46787486224656 6.020599913279625 6.020599913279625 6.020599913279625 0 1.3539171939081172 1.6989700043360187 0.0 0.75 + + {I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQK{I|L};{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}VQ{I|L}K;{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}V[AG]K{I|L};{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}V[AG]{I|L}K;{I|L}{I|L}MY{M(Oxidation (M))|F}VQK{I|L};{I|L}P{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}[KQ]V{I|L};{I|L}{I|L}MY{M(Oxidation (M))|F}VQ{I|L}K;{I|L}{I|L}MY{M(Oxidation (M))|F}V[AG]K{I|L};{I|L}{I|L}MY{M(Oxidation (M))|F}V[AG]{I|L}K;{I|L}{I|L}MY{M(Oxidation (M))|F}[KQ]V{I|L} 7.8535;7.3316;7.0553;6.5334;5.8551;5.8202;5.3332;5.0569;4.535;3.8218 +;-;-;-;-;-;-;-;-;- + 663 + 1 1.561 54094.0 1.0 13559 5153 18713 HBL1_DMSO_200M_050219_2,18714 HBL1_DMSO_200M_050219_2,18714,LPFYFVQKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18715 100.76 608.0 251540.0 25 0 39771.0 + 25108 MPYNYPVLL 9 152 555.2893585940849 1108.5641642549697 2 555.2893554568291 MULTI CID FTMS 0 0 0 18713 100903.984375 0.2614643644977674 16 -1.047210693359375 2 Unmodified _MPYNYPVLL_ ENSG00000102786|ENST00000311234|INTS6;ENSG00000165359|ENST00000639893|INTS6L;nc|ENSG00000102786|Q9UL03-3|INTS6;nc|ENSG00000165359|Q5JSJ4|INTS6L 53.57557251787612 0.0325303259649373 4 [{I|L}T]C(Carbamidomethyl (C))YMPV{I|L}{I|L} 9 5 + 61.775 0.0 0.0 5.5725 5.5725 75.897 0.0 0.0 0.0 12.94502029966219 10.330145895351848 10.330145895351848 3.0102999566398125 0 0.7429928190999391 2.0 0.3252574989159953 0.0 [{I|L}T]C(Carbamidomethyl (C))YMPV{I|L}{I|L};[{I|L}T]C(Carbamidomethyl (C))MYPV{I|L}{I|L};[{I|L}T][CG]YMPV{I|L}{I|L};[{I|L}T][CG]MYPV{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}YMPV{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}MYPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NYMPV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NMYPV{I|L}{I|L};[{I|L}T]C(Carbamidomethyl (C))Y[VP]M{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MNYPV{I|L}{I|L} 5.5725;5.301;4.7419;4.4703;4.4048;4.3588;4.2047;4.1586;3.9525;3.7997 -;-;-;-;-;-;-;-;-;- 1724 1 1.561 120400.0 1.0 13560 5153 18713 HBL1_DMSO_200M_050219_2,18715 HBL1_DMSO_200M_050219_2,18715,MPYNYPVLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18717 100.77 485.0 215890.0 25 0 29367.0 + 37586 TLIYKFLNV 9 114 555.8313338338211 1109.648114734442 2 555.8311645388603 MULTI CID FTMS 0 0 0 18716 76463.90625 0.676004985679915 2 -0.0697174072265625 1 Unmodified _TLIYKFLNV_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF 57.47134341890925 0.0274820932774257 4 [{I|L}T]{I|L}[NG]GQ{I|L}VPV 11 6 + 52.967 0.0 0.0 4.7733 4.7733 70.676 0.0 0.0 0.0 2.001962355242952 2.001962355242952 2.001962355242952 2.001962355242952 0 0.968765315847925 2.0 0.6307196863200843 0.805462187404089 [{I|L}T]{I|L}[NG]GQ{I|L}VPV;[{I|L}T]V{I|L}QG[NG]{I|L}PV;[{I|L}T]{I|L}VQG[NG]{I|L}PV;[{I|L}T]V{I|L}Q{NN|[MP]|[D{I|L}]|[EV]}{I|L}PV;[{I|L}T]V{I|L}QG[NG][VP]{I|L};[{I|L}T]{I|L}[NG]GQV{I|L}PV;[{I|L}T]{I|L}{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}VPV;[{I|L}T]{I|L}VQG[NG][VP]{I|L};[{I|L}T]V{I|L}Q{NN|[MP]|[D{I|L}]|[EV]}[VP]{I|L};[{I|L}T]{I|L}[NG]G[AG]{I|L}VPV 4.7733;4.5929;4.3894;4.3434;4.2997;4.2268;4.1807;4.0962;4.0502;3.9507 -;-;-;-;-;-;-;-;-;- 1368 1 1.561 82228.8 1.0 13561 5154 18716 HBL1_DMSO_200M_050219_2,18717 HBL1_DMSO_200M_050219_2,18717,TLIYKFLNV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18718 100.79 663.0 144970.0 25 0 10551.0 -1 TYTDLQCYL 9 116 588.7645033009983 1175.5144536687965 2 588.7656127810478 MULTI CID FTMS 0 0 0 18716 107107.421875 0.7312672425665676 10 -0.7331390380859375 2 Carbamidomethyl (C) _TYTDLQC(Carbamidomethyl (C))YL_ ENSG00000165923|ENST00000525123|AGBL2;ENST00000529712.5_1_11:47690447-47736202:-|nuORF 14.838274106304384 0.4350285940865338 4 TY{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EM{I|L} 9 -1 + 51.142 0.0 0.0 4.3506 4.3506 82.151 0.0 0.0 0.0 31.67789369254301 6.660546934575464 6.660546934575464 17.16698771296449 0 0.3054621874040891 2.0 0.3807196863200844 0.0 TY{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EM{I|L};[Y{I|L}]D{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[{M(Oxidation (M))|F}V];{I|L}YT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EM{I|L};[YV]E{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[{M(Oxidation (M))|F}V];M[{M(Oxidation (M))|F}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}EM{I|L};[QA]{[YC]|[HE]}[W{M(Oxidation (M))|F}]{I|L}[{M(Oxidation (M))|F}V] 4.3506;2.8902;2.7844;1.8224;0.87627;0.58439 -;-;-;-;-;- 211 + 1 1.561 76774.8 1.0 13562 5154 18716 HBL1_DMSO_200M_050219_2,18718 HBL1_DMSO_200M_050219_2,18718,TYTDLQCYL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18719 100.79 443.0 188590.0 25 0 29194.0 + 4037 DALRSILTI 9 106 501.3032265673282 1000.5919002014564 2 501.3031799197197 MULTI CID FTMS 0 0 0 18716 94499.53125 0.000878442538102 85 -2.8024673461914062 3 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 40.23920728925047 0.0741434193262949 4 {[QN]|[E{I|L}]|[KN]}GRS{I|L}{I|L}T{I|L} 9 3 + 67.809 0.0 0.0 6.7769 6.7769 83.047 0.0 0.0 0.0 4.471580313422194 16.478174818886373 4.471580313422194 4.471580313422194 0 1.1677353201839438 1.6989700043360187 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}GRS{I|L}{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}ARS{I|L}{I|L}T{I|L};{[DA]|[EG]}{I|L}RS{I|L}{I|L}T{I|L};[{I|L}A]DRS{I|L}{I|L}T{I|L};[{I|L}A]N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WK]{I|L}{I|L}T{I|L};{[QG]|[NA]}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}T{I|L};[{I|L}A]GG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}T{I|L};{[TV]|[{I|L}S]}[K{I|L}]W{I|L}E{I|L} 6.7769;6.33;6.2209;5.6983;5.4555;5.4397;5.3306;4.5352;3.7524 -;-;+;-;-;-;-;-;- + 301 1 1.561 70103.8 1.0 13563 5154 18716 HBL1_DMSO_200M_050219_2,18719 HBL1_DMSO_200M_050219_2,18719,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18721 100.8 29.0 2494800.0 25 0 365110.0 + 32517 SALPDIKVLTL 11 77 585.3606989212195 1168.706844909239 2 585.3609496951103 MULTI CID FTMS 0 0 0 18720 1867820.625 0.8306943579517994 4 -0.2772903442382812 1 Unmodified _SALPDIKVLTL_ ENSG00000115241|ENST00000344034|PPM1G;ENST00000472077.1_1_2:27604468-27607956:-|nuORF 43.9818466556824 0.1510575460884947 4 [DP]{I|L}KV{I|L}T{I|L} 8 3 56.675 0.0 0.0 4.8494 0.0 0.0 0.0 286.14055073781225 286.14055073781225 22.32881794509269 0.0 0.0 0.0 0 0.0 1.154901959985743 0.8494850021680094 0.0 + [DP]{I|L}KV{I|L}T{I|L} 4.8494 + + 226 1 1.561 59543.8 1.0 13564 5155 18720 HBL1_DMSO_200M_050219_2,18721 HBL1_DMSO_200M_050219_2,18721,SALPDIKVLTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18722 100.8 227.0 432890.0 25 0 81450.0 + 1313 AIVDLIHDI 9 80 504.7898647056317 1007.5651764780634 2 504.7902099490166 MULTI CID FTMS 0 0 0 18720 263727.5625 0.0663042636577348 16 -1.0764617919921875 2 Unmodified _AIVDLIHDI_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 57.47134341890925 0.0274820932774257 4 [{I|L}A]VD{I|L}{I|L}HD{I|L} 9 0 + 76.606 0.0 0.0 7.6031 7.6031 82.54 0.0 0.0 0.0 27.147642715192504 2.955454296510098 2.955454296510098 2.955454296510098 0 0.6989700043360187 2.0 1.1022338482433751 0.0 + + [{I|L}A]VD{I|L}{I|L}HD{I|L};[{I|L}A]VD{I|L}{I|L}{I|L}[HD];[{I|L}A]VD{I|L}E[HV]{I|L};[{I|L}A]VD{I|L}[NP][PG]{I|L};[{I|L}A]VD{I|L}[NP]A[VP];[{I|L}A]VD{I|L}[NP]V[PA];[{I|L}A]HHHVV[VP];[{I|L}A]HHH{I|L}{I|L}[PA] 7.6031;7.3097;5.4431;4.3317;4.033;3.9919;1.3091;1.268 +;-;-;-;-;-;-;- + 447 + 1 1.561 77451.4 1.0 13565 5155 18720 HBL1_DMSO_200M_050219_2,18722 HBL1_DMSO_200M_050219_2,18722,AIVDLIHDI True True AIVDLIHDI 100.80347 504.790209949017 87712524.0 18720.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENSG00000132182|ENST00000254508|NUP210 3.436072587966919 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18723 100.81 396.0 361080.0 25 0 79333.0 + 10136 FPWPKVLKI 9 105 376.5708211178986 1126.690633953896 3 376.5706664919853 MULTI CID FTMS 0 0 0 18720 221222.4375 0.7941952352670208 -5 0.113189697265625 3 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 49.55428908609986 0.0413471690215031 4 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 54.137 0.0 0.0 4.805 4.805 74.995 0.0 0.0 0.0 13.461149292312127 4.771212547196626 4.771212547196626 4.3933269383026285 0 0.5774509799928715 0.0 0.0 0.6861818737241735 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L};{M(Oxidation (M))|F}PWPK{I|L}VK{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K;{M(Oxidation (M))|F}PWPK{I|L}V{I|L}K;{M(Oxidation (M))|F}PW{I|L}[KP]VK{I|L};{M(Oxidation (M))|F}PW{I|L}[KP]V{I|L}K;{M(Oxidation (M))|F}{I|L}PW[KP]VK{I|L};{M(Oxidation (M))|F}P{I|L}W[KP]VK{I|L};{M(Oxidation (M))|F}{I|L}PW[KP]V{I|L}K;{M(Oxidation (M))|F}P{I|L}W[KP]V{I|L}K 4.805;4.4151;4.3815;3.9916;3.4415;3.018;2.3957;2.3848;1.9722;1.9613 +;-;-;-;-;-;-;-;-;- + 330 + 1 1.561 121862.1 1.0 13566 5155 18720 HBL1_DMSO_200M_050219_2,18723 HBL1_DMSO_200M_050219_2,18723,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18724 100.82 520.0 340370.0 25 0 32805.0 + 25950 NLPDEEIFQQL 11 129 673.3348561242276 1344.655159315255 2 673.3358032107353 MULTI CID FTMS 0 0 0 18720 168302.328125 0.0431560614612791 -4 0.0780105590820312 4 Unmodified _NLPDEEIFQQL_ ENSG00000169019|ENST00000381571|COMMD8 96.93554129104106 0.0004233824087558 4 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F}QQ{I|L} 11 4 + 74.747 0.0 0.0 5.5588 5.5588 78.115 0.0 0.0 0.0 10.435943211101474 7.724254411176005 7.724254411176005 4.36181873724172 0 1.2491348669726232 0.721246399047171 0.8764613514953893 1.110924374808178 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F}QQ{I|L};[DP]EE{I|L}{M(Oxidation (M))|F}QVQQ{I|L};[DP]EE{I|L}{I|L}N{M(Oxidation (M))|F}QQ{I|L};[DP]EE{I|L}{M(Oxidation (M))|F}QQVQ{I|L};[DP]EE{I|L}N{I|L}{M(Oxidation (M))|F}[AG]Q{I|L};[HT]CE{I|L}N{I|L}{M(Oxidation (M))|F}QQ{I|L};[DP]EE{M(Oxidation (M))|F}{I|L}QVQQ{I|L};[EP]DE{I|L}N{I|L}{M(Oxidation (M))|F}QQ{I|L};[DP]EEN{I|L}{I|L}{M(Oxidation (M))|F}QQ{I|L};[DP]EE{I|L}{M(Oxidation (M))|F}QQN{I|L}{I|L} 5.5588;5.2344;4.9914;4.9605;4.88;4.7827;4.7507;4.6343;4.6273;4.6043 -;-;-;-;-;-;-;-;-;- 10138 1 1.561 132087.3 1.0 13567 5155 18720 HBL1_DMSO_200M_050219_2,18724 HBL1_DMSO_200M_050219_2,18724,NLPDEEIFQQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18725 100.83 800.0 288910.0 25 0 42591.0 + 10226 FQLEHIMDL 9 160 573.2862005710729 1144.5578482089456 2 573.2864868044853 MULTI CID FTMS 0 0 0 18720 131554.71875 0.2885331975707769 -3 0.0678482055664062 5 Unmodified _FQLEHIMDL_ ENSG00000197102|ENST00000360184|DYNC1H1 93.16586880292088 0.0136995152735431 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EH{I|L}MD{I|L} 9 0 + 68.845 0.0 0.0 6.015 6.015 81.631 0.0 0.0 0.0 5.827731244245342 7.429928190999391 5.827731244245342 5.827731244245342 0 1.9049471895720984 0.744727494896694 0.0 0.6307196863200843 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EH{I|L}MD{I|L};[H{I|L}]E{I|L}MDQ{M(Oxidation (M))|F}{I|L};[H{I|L}]EQ{M(Oxidation (M))|F}{I|L}MD{I|L};[H{I|L}]E{I|L}Q{M(Oxidation (M))|F}MD{I|L};[H{I|L}]EQ{I|L}{M(Oxidation (M))|F}MD{I|L};[H{I|L}]EMD{I|L}Q{M(Oxidation (M))|F}{I|L};[H{I|L}]EM{I|L}DQ{M(Oxidation (M))|F}{I|L};[AG]{M(Oxidation (M))|F}{I|L}EH{I|L}MD{I|L};{[QN]|[E{I|L}]|[KN]}H{I|L}MDQ{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}HQ{M(Oxidation (M))|F}{I|L}MD{I|L} 6.015;5.5058;5.4985;5.3631;4.9574;4.8332;4.8259;4.7984;4.6704;4.663 +;-;-;-;-;-;-;-;-;- + 7042 1 1.561 172175.2 0.5099999904632568 13568 5155 18720 HBL1_DMSO_200M_050219_2,18725 HBL1_DMSO_200M_050219_2,18725,FQLEHIMDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18727 100.84 39.0 1886800.0 25 0 545960.0 + 20353 LLGAGCFLLL 10 79 510.3015415238528 1018.5885301145056 2 510.3019286990166 MULTI CID FTMS 0 0 0 18726 1446833.625 0.8233822051026544 -1 0.0391464233398437 1 Unmodified _LLGAGCFLLL_ ENSG00000130433|ENST00000252729|CACNG6 24.67388899826682 0.4143206957119831 4 {I|L}KPM{I|L}{I|L} 6 7 49.954 0.0 0.0 4.9042 0.0 0.0 305.13719374824376 0.0 305.13719374824376 0.0 38.2711470149615 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {I|L}KPM{I|L}{I|L} 4.9042 - 187 1 1.561 61431.7 1.0 13569 5156 18726 HBL1_DMSO_200M_050219_2,18727 HBL1_DMSO_200M_050219_2,18727,LLGAGCFLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18728 100.85 438.0 281010.0 25 0 16187.0 + 10142 FPWPKVLKI 9 110 564.3526484918425 1126.690744050485 2 564.3531371951103 MULTI CID FTMS 0 0 0 18726 172958.359375 0.7831631319266256 -3 0.0856857299804687 2 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 67.83816525789305 0.0219346420158844 4 {I|L}MWPKV{I|L}K{I|L} 9 2 + 79.58 0.0 0.0 7.0632 7.0632 85.444 0.0 0.0 0.0 16.989700043360187 5.726052125589973 5.726052125589973 5.726052125589973 0 1.9476212463643423 2.0 0.0 0.2302046884880938 {I|L}MWPKV{I|L}K{I|L};{I|L}MWPKV{I|L}{I|L}K;{M(Oxidation (M))|F}PWPKV{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K;[KP]VW{I|L}M{I|L}K{I|L};[KP]VW{I|L}KP{M(Oxidation (M))|F}{I|L};[KP]V{I|L}WM{I|L}K{I|L};[KP]VW{I|L}K{I|L}M{I|L};[KP]VW{I|L}P{M(Oxidation (M))|F}K{I|L};[KP]V{I|L}WKP{M(Oxidation (M))|F}{I|L} 7.0632;6.555;5.5552;5.047;4.3863;4.3004;4.0761;4.0332;4.0093;3.9902 -;-;+;-;-;-;-;-;-;- + 1115 + 1 1.561 103526.0 1.0 13570 5156 18726 HBL1_DMSO_200M_050219_2,18728 HBL1_DMSO_200M_050219_2,18728,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18729 100.85 132.0 453610.0 25 0 41113.0 + 43376 WQDWPLTQV 9 99 586.7902313949616 1171.565909856723 2 586.7905761599541 MULTI CID FTMS 0 0 0 18726 286448.875 0.6698776056663286 -2 0.0697174072265625 3 Unmodified _WQDWPLTQV_ chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 63.960520009940105 0.0238892913700936 4 [WQ]DWP{I|L} 6 3 39.829 0.0 0.0 3.3997 0.0 0.0 0.0 343.16402932377304 343.16402932377304 17.798511956568337 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 1.0387254899964358 + [WQ]DWP{I|L} 3.3997 + + 446 1 1.561 50000.7 1.0 13571 5156 18726 HBL1_DMSO_200M_050219_2,18729 HBL1_DMSO_200M_050219_2,18729,WQDWPLTQV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18730 100.86 332.0 250740.0 25 0 32268.0 + 37400 TLAKYLMEL 9 112 541.301441981499 1080.588331029798 2 541.3028442263603 MULTI CID FTMS 0 0 0 18726 146878.609375 0.4517294710579715 -2 0.0697174072265625 4 Unmodified _TLAKYLMEL_ ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1 61.60191391372663 0.0251951588191061 4 [{I|L}T]A[YK]{I|L}ME{I|L} 9 0 + 63.91 0.0 0.0 5.9144 5.9144 77.308 0.0 0.0 0.0 8.602934034162999 16.478174818886373 8.602934034162999 3.0102999566398125 0 1.6307196863200843 2.0 0.7302046884880937 0.0 + + [{I|L}T]A[YK]{I|L}ME{I|L};[{I|L}T]A[YK]M{I|L}E{I|L};[Y{I|L}]KAT{I|L}ME{I|L};[{I|L}T]A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}E{I|L};[Y{I|L}]MKAT{I|L}E{I|L};[Y{I|L}]KATM{I|L}E{I|L};[Y{I|L}]KAMT{I|L}E{I|L};[Y{I|L}]MKAE{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[RH]AT{I|L}E{I|L};[{I|L}T]A{M(Oxidation (M))|F}M[TA]{I|L}T{I|L} 5.9144;5.6358;5.1182;5.0786;5.0026;4.8396;4.8396;4.7435;4.6603;4.5883 +;-;-;-;-;-;-;-;-;- + 891 1 1.561 66857.3 1.0 13572 5156 18726 HBL1_DMSO_200M_050219_2,18730 HBL1_DMSO_200M_050219_2,18730,TLAKYLMEL True True TLAKYLMEL 100.8551 541.30284422636 2588905.75 18726.0 ENSG00000134057|ENST00000256442|CCNB1;;ENSG00000157456|ENST00000288207|CCNB2;;nc|ENSG00000134057|P14635-2|CCNB1 5.75648562113444 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18731 100.87 800.0 245290.0 25 0 20782.0 + 21673 LPLLVRVI 8 127 461.82583591828353 921.6371189033672 2 461.8261596560478 MULTI CID FTMS 0 0 0 18726 131995.15625 0.4421543252685709 -4 0.10699462890625 5 Unmodified _LPLLVRVI_ ENSG00000065150|ENST00000651721|IPO5;ENST00000468620.1_1_13:98670849-98672064:+|nuORF;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5 38.15118350030904 0.2652218139009398 4 {I|L}P{I|L}{I|L}VRV{I|L} 8 0 + 67.337 0.0 0.0 7.3062 7.3062 95.753 0.0 0.0 0.0 54.86284740837036 4.3339754259289975 4.3339754259289975 67.33709751677083 0 0.805462187404089 2.0 0.0 0.0 + + {I|L}P{I|L}{I|L}VRV{I|L} 7.3062 + + 82 + 1 1.561 151721.5 0.4699999988079071 13573 5156 18726 HBL1_DMSO_200M_050219_2,18731 HBL1_DMSO_200M_050219_2,18731,LPLLVRVI False True LPLLVRVI 100.86891 461.826159656048 8831072.0 18726.0 ENST00000468620.1_1_13:98670849-98672064:+|nuORF;;ENSG00000065150|ENST00000651721|IPO5;;nc|ENSG00000065150|O00410-3|IPO5;;nc|ENSG00000065150|O00410-2|IPO5 3.81032665570577 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18732 100.88 647.0 328630.0 25 0 42775.0 + 35790 SVIQKFVLL 9 177 523.8335900817606 1045.652627230321 2 523.8348876833916 MULTI CID FTMS 0 0 0 18726 113339.0625 0.9384198291886252 -2 0.0697174072265625 6 Unmodified _SVIQKFVLL_ ENSG00000164209|ENST00000355943|SLC25A46;nc|ENSG00000164209|Q96AG3-2|SLC25A46 61.08992128646608 0.0254786290039527 4 [VS]{I|L}QK{M(Oxidation (M))|F}V{I|L}{I|L} 9 0 + 63.087 0.0 0.0 6.0333 6.0333 73.565 0.0 0.0 0.0 10.746747421738611 9.889917747712644 9.889917747712644 0.7918124604762511 0 1.9731975075880328 2.0 0.6549471895720984 0.3494850021680094 + + [VS]{I|L}QK{M(Oxidation (M))|F}V{I|L}{I|L};[VS]{I|L}Q{M(Oxidation (M))|F}KV{I|L}{I|L};[VS]{I|L}[AG]K{M(Oxidation (M))|F}V{I|L}{I|L};[VS]{I|L}[AG]{M(Oxidation (M))|F}KV{I|L}{I|L};[Q{I|L}]K{M(Oxidation (M))|F}VSV{I|L}{I|L};[AG]{I|L}K{M(Oxidation (M))|F}VSV{I|L}{I|L};[{M(Oxidation (M))|F}V]KQ{I|L}SV{I|L}{I|L};[{M(Oxidation (M))|F}V]K{I|L}QSV{I|L}{I|L};[{M(Oxidation (M))|F}V]K[AG]{I|L}SV{I|L}{I|L};[{M(Oxidation (M))|F}V]A[KG]{I|L}SV{I|L}{I|L} 6.0333;5.9576;5.1527;5.0769;5.0055;4.7899;4.5373;3.6854;3.6567;3.6567 +;-;-;-;-;-;-;-;-;- + 2316 1 1.561 166621.6 1.0 13574 5156 18726 HBL1_DMSO_200M_050219_2,18732 HBL1_DMSO_200M_050219_2,18732,SVIQKFVLL True True SVIQKFVLL 100.88019 523.834887683392 1372995.0 18726.0 ENSG00000164209|ENST00000355943|SLC25A46;;nc|ENSG00000164209|Q96AG3-2|SLC25A46 3.9746200243632 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18733 100.89 800.0 206870.0 25 0 23422.0 + 15630 IQHDLIFSL 9 141 543.3031927427843 1084.5918325523685 2 543.3036987185478 MULTI CID FTMS 0 0 0 18726 109536.3828125 0.8023154700804715 -2 0.0697174072265625 7 Unmodified _IQHDLIFSL_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 78.7280429016045 0.0178249292250809 4 {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{I|L}{I|L}Q{M(Oxidation (M))|F}S{I|L} 9 5 + 79.759 0.0 0.0 7.3539 7.3539 79.076 0.0 0.0 0.0 1.250612633917001 7.269987279362624 1.250612633917001 1.250612633917001 0 0.3807196863200844 0.0 1.579689690656103 0.7302046884880937 {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{I|L}{I|L}Q{M(Oxidation (M))|F}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}HQ{I|L}{I|L}{M(Oxidation (M))|F}S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{I|L}{I|L}Q{M(Oxidation (M))|F}TV;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{I|L}Q{I|L}{M(Oxidation (M))|F}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}H[AG]{I|L}{I|L}{M(Oxidation (M))|F}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}H{I|L}Q{I|L}{M(Oxidation (M))|F}S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{M(Oxidation (M))|F}{I|L}Q{M(Oxidation (M))|F}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}HQ{I|L}{I|L}S{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}HQ{I|L}{M(Oxidation (M))|F}{I|L}S{I|L};[HD]{I|L}Q{I|L}{I|L}{M(Oxidation (M))|F}S{I|L} 7.3539;7.2386;6.6836;6.5013;6.3896;6.3859;6.3743;6.3377;6.259;6.2014 -;-;-;-;-;-;-;-;-;- 3374 + 1 1.561 126418.8 0.449999988079071 13575 5156 18726 HBL1_DMSO_200M_050219_2,18733 HBL1_DMSO_200M_050219_2,18733,IQHDLIFSL True True IQHDLIFSL 100.89402 543.3042 1414596.125 18726.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 3.700090249379476 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18734 100.9 258.0 294200.0 25 0 22665.0 + 34616 SPLLDLPLQ 9 81 995.5790478872616 994.5717714206615 1 997.5860473513604 MULTI CID FTMS 0 0 0 18726 70174.5859375 0.4291492499733643 14 -1.013580322265625 8 Unmodified _SPLLDLPLQ_ REV__ENSG00000189051|ENST00000399398|RNF222 49.93300154707207 0.0405168250806675 4 D{I|L}EVP[Q{I|L}] 7 -1 39.345 0.0 0.0 3.956 0.0 0.0 182.14260677689973 0.0 182.14260677689973 0.0 11.99586253367455 0.0 0.0 0 1.173877368056628 0.0 0.6139829889124311 1.2293036574208875 D{I|L}EVP[Q{I|L}] 3.956 - 1775 + 1 1.561 56321.9 1.0 13576 5156 18726 HBL1_DMSO_200M_050219_2,18734 HBL1_DMSO_200M_050219_2,18734,SPLLDLPLQ False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18736 100.9 55.0 1497500.0 25 0 150680.0 + 2734 ATIEDILFKA 10 90 560.815848061414 1119.617143189628 2 560.8163329958916 MULTI CID FTMS 0 0 0 18735 1036282.4375 0.8880409797195571 1 -0.08154296875 1 Unmodified _ATIEDILFKA_ ENSG00000145736|ENST00000274400|GTF2H2;ENSG00000183474|ENST00000380729|GTF2H2C;ENST00000502619.5_1_5:68860950-68874677:+|nuORF;ENST00000507549.7_1_5:69716099-69717567:+|nuORF;ENST00000508065.7_1_5:69716099-69743177:+|nuORF;ENST00000508325.5_1_5:68860950-68862940:+|nuORF;ENST00000521942.5_1_5:70344502-70358599:-|nuORF;ENST00000522654.5_1_5:70344846-70358599:-|nuORF;ENST00000523003.5_1_5:70351153-70358599:-|nuORF 34.93206674587334 0.2110832994570416 4 [TA]{I|L}ED{I|L}{I|L}{M(Oxidation (M))|F}[KA] 10 0 + 70.495 0.0 0.0 6.2963 6.2963 89.447 0.0 0.0 0.0 15.740312677277188 8.819459175083608 8.819459175083608 14.260361186099397 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.3054621874040891 + + [TA]{I|L}ED{I|L}{I|L}{M(Oxidation (M))|F}[KA];[PG]{I|L}P{I|L}{I|L}DE{I|L}[PG];[VP]AP{I|L}{I|L}DE{I|L}[PG];[R{M(Oxidation (M))|F}]N{I|L}TDR[KA];[R{M(Oxidation (M))|F}]N[QP]{I|L}{M(Oxidation (M))|F}[KA];{[QN]|[E{I|L}]|[KN]}D{I|L}[PG][{I|L}P]{I|L}[PG];[R{M(Oxidation (M))|F}]N{I|L}[QP]{M(Oxidation (M))|F}[KA];{NN|[MP]|[D{I|L}]|[EV]}E{I|L}[PG][{I|L}P]{I|L}[PG];[R{M(Oxidation (M))|F}][KA]EDR[KA];{[QN]|[E{I|L}]|[KN]}VE[PG][{I|L}P]{I|L}[PG] 6.2963;5.0226;4.2002;3.248;3.1615;3.1532;3.0042;2.8136;2.7377;2.6837 +;-;-;-;-;-;-;-;-;- + 760 + 1 1.561 68106.3 1.0 13577 5157 18735 HBL1_DMSO_200M_050219_2,18736 HBL1_DMSO_200M_050219_2,18736,ATIEDILFKA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18737 100.91 113.0 510410.0 25 0 41629.0 + 39169 TYPEFLANAL 10 95 569.7921425131698 1137.5697320931397 2 569.7923461794853 MULTI CID FTMS 0 0 0 18735 488445.09375 0.4259397643878471 8 -0.6418991088867188 2 Unmodified _TYPEFLANAL_ ENSG00000064703|ENST00000369702|DDX20;ENST00000475700.1_1_1:112303127-112303484:+|nuORF 15.847184025352805 0.5816416552707754 4 [EP]{M(Oxidation (M))|F}{I|L}ANA 7 3 42.752 0.0 0.0 3.7581 0.0 0.0 0.0 392.182377927377 392.182377927377 12.908489218227784 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.4247425010840047 + [EP]{M(Oxidation (M))|F}{I|L}ANA 3.7581 + + 974 1 1.561 51558.8 1.0 13578 5157 18735 HBL1_DMSO_200M_050219_2,18737 HBL1_DMSO_200M_050219_2,18737,TYPEFLANAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18738 100.91 146.0 723010.0 25 0 46938.0 + 17164 KLILLITQV 9 118 520.8568812488593 1039.6992095645185 2 520.8579589724541 MULTI CID FTMS 0 0 0 18735 429825.96875 0.4850286222804743 6 -0.5465164184570312 3 Unmodified _KLILLITQV_ ENSG00000163811|ENST00000407426|WDR43 55.50274090549119 0.0285720310785888 4 {I|L}{I|L}{I|L}K{I|L}{I|L}TQV 9 2 + 68.287 0.0 0.0 6.568 6.568 79.831 0.0 0.0 0.0 10.952397249491549 53.68322703951938 10.952397249491549 3.0102999566398125 0 0.9634679910804403 0.7695510786217261 0.4247425010840047 0.2887254899964357 {I|L}{I|L}{I|L}K{I|L}{I|L}TQV;{I|L}{I|L}{I|L}{I|L}K{I|L}TQV;{I|L}{I|L}K{I|L}{I|L}{I|L}TQV;{I|L}{I|L}{I|L}K{I|L}T{I|L}QV;{I|L}{I|L}{I|L}{I|L}KT{I|L}QV;{I|L}{I|L}{I|L}K{I|L}{I|L}T[AG]V;{I|L}{I|L}K{I|L}{I|L}T{I|L}QV;{I|L}{I|L}{I|L}{I|L}K{I|L}T[AG]V;{I|L}{I|L}K{I|L}{I|L}{I|L}T[AG]V;{I|L}{I|L}{I|L}K{I|L}T{I|L}[AG]V 6.568;6.2785;6.1091;5.9889;5.6994;5.6823;5.53;5.3928;5.2234;5.1033 -;-;-;-;-;-;-;-;-;- 685 1 1.561 82332.7 1.0 13579 5157 18735 HBL1_DMSO_200M_050219_2,18738 HBL1_DMSO_200M_050219_2,18738,KLILLITQV True True KLILLITQV 100.90895 520.857958972454 14125097.0 18735.0 ENSG00000163811|ENST00000407426|WDR43 4.044077078501384 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18739 100.91 172.0 709100.0 25 0 82915.0 + 29743 QPPPPPLWI 9 129 522.7973750860575 1043.580197238915 2 522.7982665896416 MULTI CID FTMS 0 0 0 18735 326928.34375 0.1336077908167013 -4 0.1509780883789062 4 Unmodified _QPPPPPLWI_ ENSG00000135045|ENST00000376854|C9orf40 44.40701690623563 0.0526327925666318 4 [{I|L}P]PPP[QP]W{I|L} 9 2 + 20.959 0.0 0.0 2.0084 2.0084 68.032 0.0 0.0 0.0 3.0134852715140106 -1.023050448947625 -1.023050448947625 4.506532939752912 0 0.6989700043360187 1.0 0.0 0.0 [{I|L}P]PPP[QP]W{I|L};[QP]{[HG]|PP}P[{I|L}P]W{I|L};[{I|L}P]PPQ{[HG]|PP}W{I|L};{[HG]|PP}{I|L}PP[QP]W{I|L};[QP][YK][{I|L}P]W{I|L};[{I|L}P]PP[AG]{[HG]|PP}W{I|L};[QP]{[HG]|PP}P[WP]{I|L}{I|L};{[HG]|PP}{I|L}PQ{[HG]|PP}W{I|L};[WE]{I|L}Q[RV]T{I|L};[{I|L}P][YK][QP]W{I|L} 2.0084;1.5765;1.3386;1.0139;0.8794;0.45621;0.45504;0.34412;0.3406;0.33649 -;+;-;-;-;-;-;-;-;- + 685 1 1.561 97144.2 1.0 13580 5157 18735 HBL1_DMSO_200M_050219_2,18739 HBL1_DMSO_200M_050219_2,18739,QPPPPPLWI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18740 100.92 255.0 318150.0 25 0 75187.0 + 30114 QVIQSLIAL 9 99 492.8080146167927 983.6014763003852 2 492.8082458376884 MULTI CID FTMS 0 0 0 18735 310593.5625 0.8972415425522408 1 -0.08154296875 5 Unmodified _QVIQSLIAL_ ENSG00000185651|ENST00000342192|UBE2L3;ENSG00000236444|ENST00000635918|UBE2L5;ENST00000496722.1_1_22:21922618-21975955:+|nuORF;nc|ENSG00000185651|P68036-2|UBE2L3;nc|ENSG00000185651|P68036-3|UBE2L3 64.23631603340823 0.0237365939569086 4 [{I|L}A]GSVQ{I|L} 7 6 52.387 0.0 0.0 5.326 0.0 0.0 0.0 312.19279420810045 312.19279420810045 19.40593655542104 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.924742501084005 0.3252574989159953 [{I|L}A]GSVQ{I|L} 5.326 - 1150 1 1.561 65018.6 1.0 13581 5157 18735 HBL1_DMSO_200M_050219_2,18740 HBL1_DMSO_200M_050219_2,18740,QVIQSLIAL True True QVIQSLIAL 100.91704 492.808245837688 2952441.5 18735.0 ENST00000496722.1_1_22:21922618-21975955:+|nuORF;;nc|ENSG00000185651|P68036-3|UBE2L3;;ENSG00000236444|ENST00000635918|UBE2L5;;nc|ENSG00000185651|P68036-2|UBE2L3;;ENSG00000185651|ENST00000342192|UBE2L3 2.309126396973928 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18741 100.93 800.0 502070.0 25 0 25779.0 -1 0 196 872.4171467820075 3485.63948126163 4 872.9224731326103 MULTI CID FTMS 0 0 0 18735 168682.15625 0.0100923168493467 -3 0.135009765625 6 4 [YQ]{I|L}H{I|L}EN{[MS]|[{M(Oxidation (M))|F}A]}NV 11 -1 77.255 0.0 0.0 2.2164 0.0 0.0 0.0 2153.9107784279545 2153.9107784279545 25.4087199465783 0.0 0.0 0.0 0 1.5 1.2218487496163564 0.0 0.805462187404089 [YQ]{I|L}H{I|L}EN{[MS]|[{M(Oxidation (M))|F}A]}NV 2.2164 - 11917 + 1 1.561 264942.2 0.6399999856948853 13582 5157 18735 HBL1_DMSO_200M_050219_2,18741 HBL1_DMSO_200M_050219_2,18741, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18742 100.94 368.0 332500.0 25 0 50181.0 + 20014 LIMELINNV 9 133 529.7984235112995 1057.5822940893988 2 529.7986938357353 MULTI CID FTMS 0 0 0 18735 156811.453125 0.4850891606209763 -2 0.1044387817382812 7 Unmodified _LIMELINNV_ ENSG00000110955|ENST00000262030|ATP5F1B;ENST00000547250.5_1_12:57033951-57037708:-|nuORF 109.62928328672726 0.0058899017516516 4 {I|L}{I|L}EM{I|L}{I|L}C{I|L} 8 5 63.167 0.0 0.0 5.9728 0.0 0.0 0.0 126.04845554863633 126.04845554863633 37.57138085116033 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.5866968715561641 0.0 {I|L}{I|L}EM{I|L}{I|L}C{I|L} 5.9728 - 1370 1 1.561 100700.8 1.0 13583 5157 18735 HBL1_DMSO_200M_050219_2,18742 HBL1_DMSO_200M_050219_2,18742,LIMELINNV True True LIMELINNV 100.93753 529.798693835735 2615893.75 18735.0 ENSG00000110955|ENST00000262030|ATP5F1B;;ENST00000547250.5_1_12:57033951-57037708:-|nuORF 5.663694699605306 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18743 100.94 358.0 319510.0 25 0 34417.0 + 23930 LVQDILLNV 9 129 513.8139731229898 1025.6133933127794 2 513.8137084841728 MULTI CID FTMS 0 0 0 18735 136127.265625 0.6967907688596655 7 -0.5981292724609375 8 Unmodified _LVQDILLNV_ ENSG00000116922|ENST00000486637|C1orf109;ENST00000464178.1_1_1:38148797-38151999:-|nuORF 71.13359017698441 0.0206607516130725 4 [{I|L}V]EN{I|L}{I|L} 6 5 47.202 0.0 0.0 4.6023 0.0 0.0 0.0 341.1827406881675 341.1827406881675 23.998677848200835 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5866968715561641 1.024227503252014 [{I|L}V]EN{I|L}{I|L} 4.6023 - 1751 1 1.561 88545.6 1.0 13584 5157 18735 HBL1_DMSO_200M_050219_2,18743 HBL1_DMSO_200M_050219_2,18743,LVQDILLNV True True MLFGHPLLV 100.94398 513.813708484173 929643.25 18735.0 nc|ENSG00000102226|P51784|USP11;;ENST00000469080.5_1_X:47092634-47106681:+|nuORF;;ENSG00000102226|ENST00000377107|USP11;;ENST00000488848.1_1_X:47102801-47104466:+|nuORF 4.496655305226644 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18744 100.96 800.0 151160.0 25 0 27255.0 -1 0 101 717.4214653857445 716.4141889191444 1 717.4227172732353 MULTI CID FTMS 0 0 0 18735 92313.59375 0.897683182823519 2 -0.1728515625 9 4 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}MV 6 -1 + 70.666 0.0 0.0 9.8638 9.8638 95.301 0.0 0.0 0.0 12.887955392469692 16.197887582883936 12.887955392469692 10.31234684152075 0 0.9674165578762486 1.2218487496163564 1.0356668758921828 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}{I|L}MV;{[QN]|[E{I|L}]|[KN]}{I|L}M{I|L}V;{I|L}{I|L}E{I|L}MV;{I|L}{I|L}EM{I|L}V;{[QN]|[E{I|L}]|[KN]}M{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}{I|L}V;{I|L}{I|L}{I|L}EMV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}MV{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}PV{I|L} 9.8638;8.4244;8.0649;6.6254;6.5371;5.6329;5.5644;2.5954;2.514;2.5085 -;-;-;-;-;-;-;-;-;- 221 1 1.561 92579.6 0.9300000071525574 13585 5157 18735 HBL1_DMSO_200M_050219_2,18744 HBL1_DMSO_200M_050219_2,18744, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18745 100.97 800.0 218150.0 25 0 31904.0 + 1765 ALRPLIPAL 9 116 482.3210502752388 962.6275476172776 2 482.3213378787041 MULTI CID FTMS 0 0 0 18735 97045.7734375 0.4362239461922084 11 -0.7986984252929688 10 Unmodified _ALRPLIPAL_ ENST00000506004.5_1_5:141348908-141349118:+|nuORF 36.04419817259434 0.0971720506436186 4 [{I|L}A][VP]VA{I|L} 7 4 35.947 0.0 0.0 3.7342 0.0 0.0 0.0 296.1600071037837 296.1600071037837 12.653631197717983 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 [{I|L}A][VP]VA{I|L} 3.7342 - 209 1 1.561 137223.7 0.3899999856948852 13586 5157 18735 HBL1_DMSO_200M_050219_2,18745 HBL1_DMSO_200M_050219_2,18745,ALRPLIPAL True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18746 100.98 423.0 213560.0 25 0 36870.0 + 9893 FPFTPYSI 8 85 971.4880375120416 970.4807610454416 1 971.4893676638604 MULTI CID FTMS 0 0 0 18735 94947.875 0.8880543869491899 -1 0.0652923583984375 11 Unmodified _FPFTPYSI_ ENSG00000013573|ENST00000542838|DDX11;ENST00000535158.5_1_12:31227017-31242187:+|nuORF;ENST00000536265.5_1_12:31227017-31242486:+|nuORF;ENST00000539757.1_1_12:9440801-9462940:+|nuORF;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000013573|Q96FC9-5|DDX11;nc|ENSG00000013573|Q96FC9|DDX11;nc|ENSG00000256263|A8MPP1|DDX11L8 101.72198241140316 0.0888720693655427 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{M(Oxidation (M))|F}PYS{I|L} 8 2 + 64.875 0.0 0.0 6.6848 6.6848 84.704 0.0 0.0 0.0 10.734002963358408 14.024174299985006 10.734002963358408 6.237125054200234 0 0.9731975075880328 1.3979400086720375 1.6549471895720984 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{M(Oxidation (M))|F}PYS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}TPYS{I|L};{I|L}M{M(Oxidation (M))|F}TPYS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[YE]S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV[YE]S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[YT]D{I|L};{M(Oxidation (M))|F}VV{M(Oxidation (M))|F}PYS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}[YT]VE;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV[YT]D{I|L};{I|L}M{M(Oxidation (M))|F}[YR]{[QN]|[E{I|L}]|[KN]} 6.6848;6.0422;5.5788;4.6225;4.2433;3.6374;3.4884;3.3037;3.2583;3.2414 -;+;-;-;-;-;-;-;-;- + 459 1 1.561 65950.9 1.0 13587 5157 18735 HBL1_DMSO_200M_050219_2,18746 HBL1_DMSO_200M_050219_2,18746,FPFTPYSI True True FPFTPYSI 100.98038 971.48936766386 3442009.75 18735.0 ENST00000535158.5_1_12:31227017-31242187:+|nuORF;;ENST00000536265.5_1_12:31227017-31242486:+|nuORF;;nc|ENSG00000013573|Q96FC9|DDX11;;nc|ENSG00000013573|Q96FC9-4|DDX11;;nc|ENSG00000013573|Q96FC9-5|DDX11;;ENST00000539757.1_1_12:9440801-9462940:+|nuORF;;ENSG00000013573|ENST00000542838|DDX11;;nc|ENSG00000256263|A8MPP1|DDX11L8 3.892237106959025 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18748 100.99 44.0 1619100.0 25 0 206550.0 + 25617 NFPEHIFPAL 10 85 592.8085179881461 1183.6024830430922 2 592.8088256716728 MULTI CID FTMS 0 0 0 18747 1170192.375 0.1897838433570843 -9 0.3032302856445312 1 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 46.0223103267499 0.103496714999793 4 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 8 8 52.401 0.0 0.0 4.4272 0.0 0.0 0.0 126.03540979556875 126.03540979556875 19.66067799904572 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.3054621874040891 0.805462187404089 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 4.4272 - 526 + 1 1.567 61560.8 1.0 13588 5158 18747 HBL1_DMSO_200M_050219_2,18748 HBL1_DMSO_200M_050219_2,18748,NFPEHIFPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18749 101.0 642.0 226390.0 25 0 18061.0 + 37699 TLPDLVPQL 9 125 498.2925479184563 994.5705429037126 2 498.2921020388603 MULTI CID FTMS 0 0 0 18747 147333.4375 0.260325600394817 11 -0.8146896362304688 2 Unmodified _TLPDLVPQL_ ENSG00000163811|ENST00000407426|WDR43 67.34385681178166 0.0221257235307089 4 VPQ{I|L} 4 5 32.955 0.0 0.0 3.3135 0.0 0.0 539.2957759132814 0.0 539.2957759132814 0.0 9.132783087796575 0.0 0.0 0 0.6694451763165201 0.0 0.0 1.0114393726401687 + VPQ{I|L} 3.3135 + + 828 + 1 1.567 116248.5 1.0 13589 5158 18747 HBL1_DMSO_200M_050219_2,18749 HBL1_DMSO_200M_050219_2,18749,TLPDLVPQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18750 101.01 671.0 1280500.0 25 0 55494.0 -1 0 241 1162.887404097417 3485.640382892452 3 1163.558764636517 MULTI CID FTMS 0 0 0 18747 491729.875 0.1642314688054314 -2 0.1468353271484375 3 4 V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}AEVMT 9 -1 68.707 0.0 0.0 1.9711 0.0 0.0 2449.0552339475803 0.0 2449.0552339475803 0.0 17.715299873086607 0.0 0.0 0 2.1989700043360187 0.0 0.0 2.110924374808178 V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}AEVMT 1.9711 - 29392 1 1.567 496936.1 1.0 13590 5158 18747 HBL1_DMSO_200M_050219_2,18750 HBL1_DMSO_200M_050219_2,18750, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18751 101.01 120.0 644090.0 25 0 91852.0 + 36656 TAVESFLTI 9 100 490.768680998552 979.522809063904 2 490.7687255740166 MULTI CID FTMS 0 0 0 18747 471990.875 0.5571592063042838 -1 0.08154296875 4 Unmodified _TAVESFLTI_ ENSG00000143653|ENST00000366510|SCCPDH 34.10243960390752 0.1078313939113124 4 [{I|L}T]{I|L}C(Carbamidomethyl (C)){M(Oxidation (M))|F} 5 7 36.459 0.0 0.0 3.7221 0.0 0.0 0.0 342.20472980048527 342.20472980048527 3.2171085012544154 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.079689690656103 0.0 [{I|L}T]{I|L}C(Carbamidomethyl (C)){M(Oxidation (M))|F} 3.7221 - 1170 1 1.567 62852.1 1.0 13591 5158 18747 HBL1_DMSO_200M_050219_2,18751 HBL1_DMSO_200M_050219_2,18751,TAVESFLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18752 101.02 268.0 281730.0 25 0 10478.0 -1 0 93 1155.288216871713 4617.123761620453 4 1155.544360339642 MULTI CID FTMS 0 0 0 18747 177015.84375 0.6417033115112561 -1 0.08154296875 5 4 V[YQ]{M(Oxidation (M))|F}CYSV 8 -1 28.665 0.0 0.0 0.62084 0.0 0.0 2987.412350539337 637.2714327447874 3624.683783284124 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 V[YQ]{M(Oxidation (M))|F}CYSV 0.62084 - 2136 + 1 1.567 51420.6 1.0 13592 5158 18747 HBL1_DMSO_200M_050219_2,18752 HBL1_DMSO_200M_050219_2,18752, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18753 101.03 646.0 265960.0 25 0 27971.0 -1 GGNGDCDC 8 135 427.6221045752794 853.2296562173589 2 427.6227599978447 MULTI CID FTMS 0 0 0 18747 167270.484375 0.6773872984934155 -1 0.08154296875 6 2 Carbamidomethyl (C) _GGNGDC(Carbamidomethyl (C))DC(Carbamidomethyl (C))_ ENSG00000115221|ENST00000283249|ITGB6 0.6903765706972694 0.8201419426409876 4 {[CP]|[EA]}S 3 -1 14.662 0.0 0.0 1.7185 0.0 0.0 0.0 563.1105462352821 563.1105462352821 4.747583264693748 0.0 0.0 0.0 0 0.7215141619232908 0.0 0.0 0.0 {[CP]|[EA]}S 1.7185 - 20 + 1 1.567 140731.8 1.0 13593 5158 18747 HBL1_DMSO_200M_050219_2,18753 HBL1_DMSO_200M_050219_2,18753,GGNGDCDC False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18754 101.03 321.0 352220.0 25 0 47048.0 + 34745 SPYPWPLNHI 10 93 612.3143340079008 1222.6141150826015 2 612.3140136599541 MULTI CID FTMS 0 0 0 18747 162969.703125 0.397771311436335 53 -2.3308563232421875 7 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 81.89019881105858 0.0155187237978306 4 [PS]YPW{I|L}PV[HQ] 10 4 + 73.993 0.0 0.0 6.0521 6.0521 80.713 0.0 0.0 0.0 19.558546584526795 4.771212547196626 4.771212547196626 4.771212547196626 0 1.1861818737241734 1.5228787452803376 0.0 1.4049471895720984 [PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PN[H{I|L}];[PS]YPW{I|L}P[HQ]V;[PS]Y{I|L}[WP]PV[HQ];[PS]YPW{I|L}PGG[H{I|L}];[PS]Y{I|L}[WP]PN[H{I|L}];[PS]Y{I|L}[WP]P[HQ]V;[PS]YPW{I|L}{[HG]|PP}[PA]V;[PS]Y{I|L}[NS][RH][H{I|L}];[WP]VP{I|L}[RD]P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.0521;5.6618;5.0254;3.8549;3.7631;3.4646;2.8282;2.7782;2.4497;2.3991 -;-;-;-;-;-;-;-;-;- 737 + 1 1.567 86155.8 1.0 13594 5158 18747 HBL1_DMSO_200M_050219_2,18754 HBL1_DMSO_200M_050219_2,18754,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18755 101.04 359.0 279440.0 25 0 39840.0 + 15244 IPFVAPPLV 9 102 476.7970304705845 951.5795080079688 2 476.7970153689384 MULTI CID FTMS 0 0 0 18747 150118.796875 0.6118725762192724 16 -0.9207229614257812 8 Unmodified _IPFVAPPLV_ ENSG00000159596|ENST00000372025|TMEM69 36.46614268402704 0.0948557732959553 4 P{I|L}WP{I|L} 5 6 28.404 0.0 0.0 2.9849 0.0 0.0 327.2154771872136 0.0 327.2154771872136 0.0 14.424712680444358 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L}WP{I|L} 2.9849 - 223 + 1 1.567 81296.1 1.0 13595 5158 18747 HBL1_DMSO_200M_050219_2,18755 HBL1_DMSO_200M_050219_2,18755,IPFVAPPLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18756 101.05 619.0 150940.0 25 0 15805.0 26545 NVIPDEVLQTL 11 125 620.8430880899003 0 620.8484985232353 PEAK CID FTMS 0 0 0 -1 0 9 Unmodified _NVIPDEVLQTL_ ENSG00000163848|ENST00000360647|ZNF148;ENST00000497929.1_1_3:124951187-125011317:-|nuORF 28.49450938151212 0.2463772716552905 4 TT{I|L}Q{I|L}V 6 9 21.771 0.0 0.0 1.7562 0.0 0.0 243.1463679749193 338.0998629205688 581.2462308954881 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TT{I|L}Q{I|L}V 1.7562 - 3270 + 1 1.567 70834.2 1.0 13596 5158 18747 HBL1_DMSO_200M_050219_2,18756 HBL1_DMSO_200M_050219_2,18756,NVIPDEVLQTL False True IQLPDSVNQLL 101.05023 620.848498523235 1623699.25 18747.0 nc|ENSG00000119777|Q6NUQ4-2|TMEM214;;ENSG00000119777|ENST00000238788|TMEM214;;ENST00000469445.1_1_2:27263203-27263702:+|nuORF 2.533651192982992 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18757 101.06 362.0 249010.0 25 0 34265.0 29158 QFQLKEQL 8 120 517.2868823138978 1032.5592116945954 2 517.2870361208916 MULTI CID FTMS 0 0 0 18747 101121.875 1.0 0 0.0 10 Unmodified _QFQLKEQL_ chr7:115984513-116110708|44|24.25|0.7|5.11|-|ENST00000484212|TFEC,TFEC;chr7:116110926-116111992|41|18.41|0.46|5.31|-|ENST00000484212|TFEC,TFEC;chr7:116112038-116159790|38|13.89|0.33|5.4|-|ENST00000484212|TFEC,TFEC 18.13498045792455 0.6430038125133779 4 QWA{I|L} 4 6 22.897 0.0 0.0 2.2175 0.0 0.0 516.2899378682267 0.0 516.2899378682267 0.0 5.194386230930075 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 QWA{I|L} 2.2175 - 364 + 1 1.567 76283.1 1.0 13597 5158 18747 HBL1_DMSO_200M_050219_2,18757 HBL1_DMSO_200M_050219_2,18757,QFQLKEQL False False False False splicing PXD020620_cell_line HBL1_DMSO_200M_050219_2 18758 101.07 800.0 271690.0 25 0 54328.0 41812 VPVYYPQV 8 105 482.7602283486477 963.5059037640956 2 482.7608520388603 MULTI CID FTMS 0 0 0 18747 88529.8203125 1.0 0 0.0 11 Unmodified _VPVYYPQV_ nc|ENSG00000178125|Q7Z4L9|PPP1R42 15.768221252438446 0.6779680726941459 4 [{I|L}A]G 3 8 23.952 0.0 0.0 2.486 0.0 0.0 0.0 719.3401224743095 719.3401224743095 0.2410497646861387 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]G 2.486 - 86 1 1.567 170759.2 0.3799999952316284 13598 5158 18747 HBL1_DMSO_200M_050219_2,18758 HBL1_DMSO_200M_050219_2,18758,VPVYYPQV False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 18760 101.08 14.0 5263400.0 25 0 539550.0 + 25951 NLPDEEIFQQL 11 94 673.3348561242276 1344.655159315255 2 673.3358642458916 MULTI CID FTMS 0 0 0 18759 3899853.75 1.0 0 0.0 1 Unmodified _NLPDEEIFQQL_ ENSG00000169019|ENST00000381571|COMMD8 70.33199760932243 0.0314424197347918 4 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F} 8 6 49.945 0.0 0.0 3.7143 0.0 0.0 0.0 384.19224362605513 384.19224362605513 20.037144051603093 0.0 0.0 0.0 0 0.6237125054200234 0.0 0.7059771852360797 0.805462187404089 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F} 3.7143 - 1150 1 1.567 60672.5 1.0 13599 5159 18759 HBL1_DMSO_200M_050219_2,18760 HBL1_DMSO_200M_050219_2,18760,NLPDEEIFQQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18761 101.09 658.0 176900.0 25 0 26541.0 + 32518 SALPDIKVLTL 11 108 585.3606989212195 1168.706844909239 2 585.3610717654228 MULTI CID FTMS 0 0 0 18759 162076.296875 0.0720817960620728 8 -0.5861282348632812 2 Unmodified _SALPDIKVLTL_ ENSG00000115241|ENST00000344034|PPM1G;ENST00000472077.1_1_2:27604468-27607956:-|nuORF 42.312485326615175 0.1767732348921932 4 [DP]{I|L}KV{I|L}T{I|L} 8 3 62.428 0.0 0.0 5.3416 0.0 0.0 0.0 286.1383974853905 286.1383974853905 32.18887842631325 0.0 0.0 0.0 0 0.0 1.0 1.579689690656103 0.0 + [DP]{I|L}KV{I|L}T{I|L} 5.3416 + + 1182 1 1.567 93424.8 1.0 13600 5159 18759 HBL1_DMSO_200M_050219_2,18761 HBL1_DMSO_200M_050219_2,18761,SALPDIKVLTL False True SALPDIKVLTL 101.08794 585.361071765423 53326932.0 18759.0 ENST00000472077.1_1_2:27604468-27607956:-|nuORF;;ENSG00000115241|ENST00000344034|PPM1G 5.239323457082112 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18762 101.09 229.0 368190.0 25 0 82186.0 + 38907 TVLEQVLPI 9 99 506.3088019499649 1010.6030509667296 2 506.3082458376884 MULTI CID FTMS 0 0 0 18759 300769.0625 0.7163998573841301 1 -0.1587371826171875 3 Unmodified _TVLEQVLPI_ ENSG00000132002|ENST00000254322|DNAJB1;nc|ENSG00000132002|P25685-2|DNAJB1 64.23631603340823 0.0237365939569086 4 {[TV]|[{I|L}S]}{I|L}EQV 6 3 51.08 0.0 0.0 5.0544 0.0 0.0 0.0 338.2074155143628 338.2074155143628 26.58584297535363 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.774227503252014 0.0 + {[TV]|[{I|L}S]}{I|L}EQV 5.0544 + + 960 1 1.567 77348.7 1.0 13601 5159 18759 HBL1_DMSO_200M_050219_2,18762 HBL1_DMSO_200M_050219_2,18762,TVLEQVLPI True True TVLEQVLPI 101.09225 506.308245837688 3601504.75 18759.0 ENSG00000132002|ENST00000254322|DNAJB1;;nc|ENSG00000132002|P25685-2|DNAJB1 5.058850447336833 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18763 101.1 200.0 454510.0 25 0 106410.0 + 10137 FPWPKVLKI 9 88 376.5708211178986 1126.690633953896 3 376.5706054568291 MULTI CID FTMS 0 0 0 18759 278488.0 0.9997803350261074 -1 0.09130859375 4 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 34.93206674587334 0.1032771302489716 4 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 37.108 0.0 0.0 3.2935 3.2935 80.434 0.0 0.0 0.0 13.95465389544182 3.540948611372592 3.540948611372592 37.10763620059088 0 0.0 0.0 0.0 0.0 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 3.2935 + + 167 + 1 1.567 77200.3 1.0 13602 5159 18759 HBL1_DMSO_200M_050219_2,18763 HBL1_DMSO_200M_050219_2,18763,FPWPKVLKI True True FPWPKVLKI 101.09607 376.570605456829 150638407.0 18759.0 nc|ENSG00000159023|P11171-5|EPB41;;nc|ENSG00000159023|P11171-2|EPB41;;ENSG00000159023|ENST00000343067|EPB41;;nc|ENSG00000159023|P11171-3|EPB41;;nc|ENSG00000159023|P11171-4|EPB41;;nc|ENSG00000159023|P11171-6|EPB41;;nc|ENSG00000159023|P11171-7|EPB41 6.286433378855388 3.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18764 101.1 237.0 630260.0 25 0 45178.0 -1 0 112 698.1349425506107 3485.638330420053 5 698.3361694216728 MULTI CID FTMS 0 0 0 18759 266880.75 0.8259434266087706 -2 0.1728515625 5 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 39.205 0.0 0.0 1.1248 0.0 0.0 0.0 2445.025878598041 2445.025878598041 5.220836615034948 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.1248 - 914 1 1.567 116662.0 1.0 13603 5159 18759 HBL1_DMSO_200M_050219_2,18764 HBL1_DMSO_200M_050219_2,18764, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18765 101.1 167.0 329460.0 25 0 54427.0 + 10227 FQLEHIMDL 9 76 573.2862005710729 1144.5578482089456 2 573.2869140505791 MULTI CID FTMS 0 0 0 18759 248166.28125 0.5442922256128592 1 -0.1587371826171875 6 Unmodified _FQLEHIMDL_ ENSG00000197102|ENST00000360184|DYNC1H1 41.8396318013385 0.0653578398400075 4 [H{I|L}]E{I|L}MDQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 5 + 39.587 0.0 0.0 3.4587 3.4587 73.447 0.0 0.0 0.0 8.361884269476864 4.762036441594198 4.762036441594198 7.206225184280797 0 0.0 1.0 0.4247425010840047 0.4247425010840047 [H{I|L}]E{I|L}MDQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[H{I|L}]E{I|L}M[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}MHE{I|L}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YC]|[HE]}{I|L}{I|L}MDQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[H{I|L}]E{I|L}MD[AG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[H{I|L}]E[MD]{I|L}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{M(Oxidation (M))|F}V]M{I|L}T{M(Oxidation (M))|F}{I|L};[H{I|L}]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}MHE{I|L}[AG]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YC]|[HE]}{I|L}{I|L}M[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.4587;2.8291;2.7282;2.5159;2.2831;2.2273;2.195;1.9799;1.9236;1.8863 -;-;-;-;-;-;-;-;-;- 267 1 1.567 47098.8 1.0 13604 5159 18759 HBL1_DMSO_200M_050219_2,18765 HBL1_DMSO_200M_050219_2,18765,FQLEHIMDL True True FQLEHIMDL 101.1038 573.286914050579 6047441.0 18759.0 ENSG00000197102|ENST00000360184|DYNC1H1 6.549879233042399 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18766 101.11 397.0 196250.0 25 0 26476.0 + 44278 YLLNDASLISV 11 112 604.3321923244924 1206.6498317157848 2 604.3317748904228 MULTI CID FTMS 0 0 0 18759 217914.03125 1.0 0 0.0 7 Unmodified _YLLNDASLISV_ nc|ENSG00000170791|Q9BUK0-3|CHCHD7;nc|ENSG00000170791|Q9BUK0-5|CHCHD7 66.45667989310934 0.0429411148994294 4 {[QV]|[N{I|L}]|[RA]|[KV]}DAS{I|L}Y{I|L}{I|L}W 10 5 + 45.056 0.0 0.0 3.734 3.734 73.191 0.0 0.0 0.0 5.884419545523329 20.02523400835625 5.884419545523329 6.1599794513957775 0 0.718765315847925 0.0 1.610924374808178 1.555462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}DAS{I|L}Y{I|L}{I|L}W;[VS]{I|L}[WQ]Y{I|L}{I|L}W;[Y{I|L}]{I|L}HSY{I|L}{I|L}W;{[QV]|[N{I|L}]|[RA]|[KV]}DA{I|L}SY{I|L}{I|L}W;[Y{I|L}]{I|L}N{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L}W;{[TV]|[{I|L}S]}{I|L}{[WN]|[YH]}Y{I|L}{I|L}W;{[TV]|[{I|L}S]}V[WQ]Y{I|L}{I|L}W;{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}ASY{I|L}{I|L}W;{[QN]|[E{I|L}]|[KN]}[NG]S{I|L}Y{I|L}{I|L}W;{I|L}{I|L}S{[WN]|[YH]}Y{I|L}{I|L}W 3.734;3.2235;3.1955;3.0865;3.0269;2.666;2.618;2.5674;2.4029;2.2489 -;-;-;-;-;-;-;-;-;- 1570 1 1.567 58238.8 1.0 13605 5159 18759 HBL1_DMSO_200M_050219_2,18766 HBL1_DMSO_200M_050219_2,18766,YLLNDASLISV True True YLLNDASLISV 101.11091 604.331774890423 1850159.25 18759.0 nc|ENSG00000170791|Q9BUK0-3|CHCHD7;;nc|ENSG00000170791|Q9BUK0-5|CHCHD7 5.108090003331502 2.0 True 11.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 18767 101.12 436.0 358100.0 25 0 25555.0 -1 0 112 803.758288570014 2408.253036310242 3 804.0925781130791 MULTI CID FTMS 0 0 0 18759 138116.078125 0.823849658229429 -1 0.09130859375 8 4 [H{I|L}]VEA{I|L}[C(Carbamidomethyl (C))C]TV{I|L}Y{I|L}AEV{I|L}H 18 -1 104.44 0.0 0.0 4.3369 0.0 0.0 0.0 341.18176512852114 341.18176512852114 49.59965873369369 0.0 0.0 0.0 0 2.305462187404089 1.5228787452803376 1.0501648626366045 0.0 [H{I|L}]VEA{I|L}[C(Carbamidomethyl (C))C]TV{I|L}Y{I|L}AEV{I|L}H 4.3369 - 6025 1 1.567 113261.2 1.0 13606 5159 18759 HBL1_DMSO_200M_050219_2,18767 HBL1_DMSO_200M_050219_2,18767, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18768 101.13 800.0 115680.0 25 0 10309.0 -1 0 139 960.4579388598276 1918.9013247864552 2 961.4625732302666 MULTI CID FTMS 0 0 0 18759 125518.2421875 1.0 0 0.0 9 4 {I|L}TN[KA]{I|L}{[QG]|[NA]} 8 -1 22.479 0.0 0.0 1.1714 0.0 0.0 1075.4244703936802 0.0 1075.4244703936802 0.0 8.021347914442423 0.0 0.0 0 0.6677353201839438 0.0 0.0 1.6549471895720984 {I|L}TN[KA]{I|L}{[QG]|[NA]} 1.1714 - 4816 + 1 1.567 64967.7 0.550000011920929 13607 5159 18759 HBL1_DMSO_200M_050219_2,18768 HBL1_DMSO_200M_050219_2,18768, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18769 101.15 800.0 242090.0 25 0 26226.0 + 25144 MQLPTSFTL 9 175 519.2696544139768 1036.5247558947535 2 519.2699462771416 MULTI CID FTMS 0 0 0 18759 116570.4609375 1.0 0 0.0 10 Unmodified _MQLPTSFTL_ ENSG00000112658|ENST00000265354|SRF 36.12702656103203 0.0967173616627612 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QVW{M(Oxidation (M))|F}T{I|L} 8 4 + 22.437 0.0 0.0 2.1647 2.1647 61.16 0.0 0.0 0.0 0.6178843387813515 3.949474761277472 0.6178843387813515 0.6178843387813515 0 0.8979400086720375 0.7958800173440752 0.3252574989159953 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QVW{M(Oxidation (M))|F}T{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}VW{M(Oxidation (M))|F}T{I|L};[VG]C{I|L}VW{M(Oxidation (M))|F}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}WTAA{M(Oxidation (M))|F}T{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PVW{M(Oxidation (M))|F}T{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}V{[DA]|[EG]}{M(Oxidation (M))|F}T{I|L};[VG]C{I|L}V{[DA]|[EG]}{M(Oxidation (M))|F}T{I|L};[TA][W{I|L}]W{M(Oxidation (M))|F}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TP][QP]{M(Oxidation (M))|F}T{I|L};[{I|L}V]C(Carbamidomethyl (C))VW{M(Oxidation (M))|F}T{I|L} 2.1647;2.105;2.0612;1.7308;1.5255;1.5253;1.4866;1.3971;1.3228;1.2892 -;-;-;-;-;-;-;-;-;- 701 1 1.567 148129.2 0.4600000083446502 13608 5159 18759 HBL1_DMSO_200M_050219_2,18769 HBL1_DMSO_200M_050219_2,18769,MQLPTSFTL True True MQLPTSFTL 101.14639 519.269946277142 1186841.625 18759.0 ENSG00000112658|ENST00000265354|SRF 1.675138274828593 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18770 101.15 256.0 340460.0 25 0 46663.0 + 3958 DALNAWQLV 9 103 515.2710789057993 1028.5276048783985 2 515.2718383669853 MULTI CID FTMS 0 0 0 18759 114326.5625 1.0 0 0.0 11 Unmodified _DALNAWQLV_ ENSG00000138363|ENST00000236959|ATIC;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC 29.081581746732265 0.1611639662936252 4 {[DA]|[EG]}{I|L}NAWE 7 3 20.785 0.0 0.0 2.0209 0.0 0.0 0.0 226.13445237279225 226.13445237279225 -0.5627043315659854 0.0 -0.5627043315659854 0.0 0 0.0 1.0969100130080565 0.4247425010840047 0.3252574989159953 {[DA]|[EG]}{I|L}NAWE 2.0209 - 257 1 1.567 69157.4 1.0 13609 5159 18759 HBL1_DMSO_200M_050219_2,18770 HBL1_DMSO_200M_050219_2,18770,DALNAWQLV False True DALNAWQLV 101.15264 515.271838366985 915077.4375 18759.0 ENSG00000138363|ENST00000236959|ATIC;;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;;nc|ENSG00000138363|P31939-2|ATIC 0.1422091523806254 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18771 101.17 800.0 175900.0 25 0 16295.0 + -1 LEQTVMCRDCL 11 114 692.3095462567866 1382.604539580373 2 692.3105956912041 MULTI CID FTMS 0 0 0 18759 107934.03125 1.0 0 0.0 12 Carbamidomethyl (C),Oxidation (M) _LEQTVM(Oxidation (M))CRDC(Carbamidomethyl (C))L_ REV__ENSG00000130701|ENST00000252998|RBBP8NL 30.7034409873982 0.3712764582118616 4 {I|L}NPDEE 6 -1 75.399 0.0 0.0 5.4534 0.0 0.0 0.0 682.2921846979124 682.2921846979124 50.98381297763133 0.0 0.0 0.0 0 0.805462187404089 2.0 1.274227503252014 0.4247425010840047 {I|L}NPDEE 5.4534 - 1937 + 1 1.567 105188.5 0.4600000083446502 13610 5159 18759 HBL1_DMSO_200M_050219_2,18771 HBL1_DMSO_200M_050219_2,18771,LEQTVMCRDCL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18772 101.18 800.0 580120.0 25 0 75232.0 -1 0 134 1183.5286083490837 2365.042663764967 2 1184.029223620892 MULTI CID FTMS 0 0 0 18759 102281.5546875 0.6563350683815684 -1 0.09130859375 13 4 {[YC]|[HE]}P{I|L}{M(Oxidation (M))|F}N{M(Oxidation (M))|F}PA{I|L}WY 12 -1 62.904 0.0 0.0 2.6597 0.0 0.0 0.0 847.2576045210795 847.2576045210795 45.10893752172127 0.0 0.0 0.0 0 0.0 0.0 1.055462187404089 0.7302046884880937 {[YC]|[HE]}P{I|L}{M(Oxidation (M))|F}N{M(Oxidation (M))|F}PA{I|L}WY 2.6597 - 11141 1 1.567 286227.0 0.4199999868869781 13611 5159 18759 HBL1_DMSO_200M_050219_2,18772 HBL1_DMSO_200M_050219_2,18772, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18773 101.19 347.0 163310.0 25 0 26916.0 + 4038 DALRSILTI 9 79 501.3032265673282 1000.5919002014564 2 501.3038207888603 MULTI CID FTMS 0 0 0 18759 90173.1875 0.0008382259959226 90 -2.6886749267578125 14 Unmodified _DALRSILTI_ ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF 36.506200033944 0.094635877243972 4 {[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}{I|L}T{I|L} 9 3 + 51.309 0.0 0.0 5.1279 5.1279 83.075 0.0 0.0 0.0 9.542425094393252 16.478174818886373 9.542425094393252 9.542425094393252 0 0.5 1.6989700043360187 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}S{I|L}{I|L}T{I|L};{[DA]|[EG]}[R{I|L}]S{I|L}{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WK]{I|L}{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}{I|L}T{I|L} 5.1279;4.1742;4.048;3.9177 -;+;-;- + 240 1 1.567 50548.4 1.0 13612 5159 18759 HBL1_DMSO_200M_050219_2,18773 HBL1_DMSO_200M_050219_2,18773,DALRSILTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18774 101.2 800.0 18725.0 25 0 2183.1 -1 0 40 868.6628124135201 3470.62214378768 4 868.9191161990166 MULTI CID FTMS 0 0 0 18759 80987.703125 0.8413407430390761 -1 0.09130859375 15 4 {I|L}H 2 -1 8.5835 0.0 0.0 0.24732 0.0 0.0 2720.197383779016 497.2602938287719 3217.4576776077874 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}H 0.24732 - 19 + 1 1.567 20870.2 0.4099999964237213 13613 5159 18759 HBL1_DMSO_200M_050219_2,18774 HBL1_DMSO_200M_050219_2,18774, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18775 101.22 800.0 89530.0 25 0 8844.4 23936 LVQSLKEYI 9 118 546.8183262545901 1091.6220995759802 2 546.8177978396416 MULTI CID FTMS 0 0 0 18759 84869.6796875 1.0 0 0.0 16 Unmodified _LVQSLKEYI_ ENSG00000072682|ENST00000360568|P4HA2;ENST00000478055.1_1_5:131553347-131562829:-|nuORF;nc|ENSG00000072682|O15460|P4HA2 26.88365393820708 0.1891292719743517 4 [{I|L}V]QS{I|L} 5 4 24.283 0.0 0.0 2.2245 0.0 0.0 0.0 548.2696575195927 548.2696575195927 1.3071968632008435 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.6747425010840047 0.0 + [{I|L}V]QS{I|L} 2.2245 + + 205 1 1.567 60618.5 0.3899999856948852 13614 5159 18759 HBL1_DMSO_200M_050219_2,18775 HBL1_DMSO_200M_050219_2,18775,LVQSLKEYI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18776 101.23 800.0 31867.0 25 0 1453.5 -1 0 63 1116.963793933392 0 1116.963793933392 PEAK CID FTMS 0 0 0 -1 0 17 4 Q 1 -1 4.6041 0.0 0.0 0.20628 0.0 0.0 1232.4249500720591 868.4111422174436 2100.836092289502 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.20628 - 3 + 1 1.567 25524.0 0.3700000047683716 13615 5159 18759 HBL1_DMSO_200M_050219_2,18776 HBL1_DMSO_200M_050219_2,18776, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18778 101.24 5.3 17460000.0 25 0 1548700.0 -1 0 80 872.4171467820075 3485.63948126163 4 872.9195434451103 MULTI CID FTMS 0 0 0 18777 16713918.0 1.0 0 0.0 1 4 [YQ]{I|L}E 4 -1 45.406 0.0 0.0 1.3027 0.0 0.0 0.0 2949.3690704552423 2949.3690704552423 7.04119982655925 0.0 0.0 0.0 0 1.3807196863200843 1.3979400086720375 0.0 0.3807196863200844 [YQ]{I|L}E 1.3027 - 178 1 1.558 78322.2 1.0 13616 5160 18777 HBL1_DMSO_200M_050219_2,18778 HBL1_DMSO_200M_050219_2,18778, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18779 101.24 23.0 3411600.0 25 0 538020.0 + 29744 QPPPPPLWI 9 85 522.7973750860575 1043.580197238915 2 522.7979003787041 MULTI CID FTMS 0 0 0 18777 2347305.75 0.9592876898696252 -1 0.1587371826171875 2 Unmodified _QPPPPPLWI_ ENSG00000135045|ENST00000376854|C9orf40 53.57557251787612 0.0325303259649373 4 {[HG]|PP}QPP[{I|L}P]W{I|L} 9 2 + 19.393 0.0 0.0 1.8583 1.8583 66.614 0.0 0.0 0.0 0.8928068020011928 2.7765162525916764 0.8928068020011928 3.583041560618696 0 1.4731975075880328 0.0 0.0 0.7302046884880937 {[HG]|PP}QPP[{I|L}P]W{I|L};{[HG]|PP}{I|L}PP[QP]W{I|L};[{I|L}P]PPP[QP]W{I|L};{[HG]|PP}[AG]PP[{I|L}P]W{I|L} 1.8583;1.5149;1.1932;0.27621 -;-;-;- 173 1 1.558 68414.8 1.0 13617 5160 18777 HBL1_DMSO_200M_050219_2,18779 HBL1_DMSO_200M_050219_2,18779,QPPPPPLWI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18780 101.24 161.0 565080.0 25 0 53632.0 + + 12069 GQFEELLRL 9 90 552.8061635542279 1103.5977741752556 2 552.8065673708916 MULTI CID FTMS 0 0 0 18777 385612.5625 0.7028675643155957 -1 0.1587371826171875 3 Unmodified _GQFLEERLI_ ENSG00000108010|ENST00000331244|GLRX3 53.832793166522166 0.0319663582346103 4 {[QG]|[NA]}{M(Oxidation (M))|F}EE{I|L}{I|L}R{I|L} 9 -1 {[QG]|[NA]} + + 57.951 19.062 10.3 5.2511 5.2511 53.594 0.0 0.0 0.0 0.0 39.42162647416402 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.6989700043360187 {[QG]|[NA]}{M(Oxidation (M))|F}EE{I|L}{I|L}R{I|L} 5.2511 - 255 + 1 1.558 74796.3 1.0 13618 5160 18777 HBL1_DMSO_200M_050219_2,18780 HBL1_DMSO_200M_050219_2,18780,GQFLEERLI False False GQFEELLRL 101.2396 552.806567370892 7705265.0 18777.0 ENSG00000108010|ENST00000331244|GLRX3 6.748888810475667 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18781 101.24 218.0 492250.0 25 0 35513.0 -1 0 94 847.1560649459955 3384.5951539175817 4 847.4075805544853 MULTI CID FTMS 0 0 0 18777 324766.53125 0.3799212690537707 -5 0.4360275268554687 4 4 [YQ]{I|L}H{I|L}[W{I|L}]Y 8 -1 45.623 0.0 0.0 1.3479 0.0 0.0 0.0 2265.0062525639896 2265.0062525639896 7.486512420283233 0.0 0.0 0.0 0 0.9247425010840048 1.0969100130080565 0.0 0.0 [YQ]{I|L}H{I|L}[W{I|L}]Y 1.3479 - 272 + 1 1.558 81801.7 1.0 13619 5160 18777 HBL1_DMSO_200M_050219_2,18781 HBL1_DMSO_200M_050219_2,18781, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18782 101.25 179.0 329100.0 25 0 14898.0 + 43377 WQDWPLTQV 9 91 586.7902313949616 1171.565909856723 2 586.7908203005791 MULTI CID FTMS 0 0 0 18777 317485.0625 0.7424575624614503 2 -0.18218994140625 5 Unmodified _WQDWPLTQV_ chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 63.960520009940105 0.0238892913700936 4 [WQ]DWP{I|L}G 7 3 41.291 0.0 0.0 3.5244 0.0 0.0 0.0 286.13363381596054 286.13363381596054 27.18842613044969 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 1.079689690656103 [WQ]DWP{I|L}G 3.5244 - 694 1 1.558 48754.8 1.0 13620 5160 18777 HBL1_DMSO_200M_050219_2,18782 HBL1_DMSO_200M_050219_2,18782,WQDWPLTQV True True WQDWPLTQV 101.24723 586.790820300579 11909659.0 18777.0 nc|ENSG00000132185|Q7L513-10|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-8|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA 7.639954408009847 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18783 101.25 279.0 460880.0 25 0 46375.0 + 21674 LPLLVRVI 8 95 461.82583591828353 921.6371189033672 2 461.8259155154228 MULTI CID FTMS 0 0 0 18777 298527.34375 1.0 0 0.0 6 Unmodified _LPLLVRVI_ ENSG00000065150|ENST00000651721|IPO5;ENST00000468620.1_1_13:98670849-98672064:+|nuORF;nc|ENSG00000065150|O00410-2|IPO5;nc|ENSG00000065150|O00410-3|IPO5 46.92087301778293 0.1537303740847981 4 {I|L}P{I|L}{I|L}V[RV]{I|L} 8 0 + 75.896 0.0 0.0 8.2349 8.2349 84.242 0.0 0.0 0.0 32.22357194224834 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 1.1989700043360187 2.0 0.0 0.2302046884880938 + + {I|L}P{I|L}{I|L}V[RV]{I|L};{I|L}P{I|L}{I|L}V[R{I|L}]V;{I|L}P{I|L}{I|L}[R{I|L}]VV 8.2349;7.9083;7.4178 +;-;- + 117 + 1 1.558 104775.9 1.0 13621 5160 18777 HBL1_DMSO_200M_050219_2,18783 HBL1_DMSO_200M_050219_2,18783,LPLLVRVI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18784 101.26 182.0 384260.0 25 0 92128.0 + 20354 LLGAGCFLLL 10 86 510.3015415238528 1018.5885301145056 2 510.3018066287041 MULTI CID FTMS 0 0 0 18777 287962.59375 0.1638773604179643 3 -0.2149276733398437 7 Unmodified _LLGAGCFLLL_ ENSG00000130433|ENST00000252729|CACNG6 24.67388899826682 0.4143206957119831 4 {I|L}KPM{I|L}{I|L} 6 7 44.117 0.0 0.0 4.3312 0.0 0.0 305.13777358222814 0.0 305.13777358222814 0.0 38.63290021996811 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}KPM{I|L}{I|L} 4.3312 - 119 1 1.558 57978.9 1.0 13622 5160 18777 HBL1_DMSO_200M_050219_2,18784 HBL1_DMSO_200M_050219_2,18784,LLGAGCFLLL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18785 101.26 194.0 432250.0 25 0 108030.0 + 20576 LLNPVDLLL 9 94 505.3177315862467 1008.6209102392934 2 505.3183166384697 MULTI CID FTMS 0 0 0 18777 234150.46875 0.5543182815398281 -2 0.2500457763671875 8 Unmodified _LLNPVDLLL_ REV__ENST00000503413.1_1_4:81189541-81207823:+|nuORF 26.88365393820708 0.1891292719743517 4 [VP]EQVV{I|L}{I|L}{I|L} 9 -1 + 50.917 0.0 0.0 5.0482 5.0482 72.863 0.0 0.0 0.0 5.511618382714119 10.330145895351848 5.511618382714119 2.6979531151190628 0 0.7429928190999391 0.8860566476931632 0.0 0.2742275032520141 [VP]EQVV{I|L}{I|L}{I|L};[VP]EQV{I|L}V{I|L}{I|L};[{I|L}A][DG]PVV{I|L}{I|L}{I|L};[VP]EVQV{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EPVV{I|L}{I|L}{I|L};[VP]EN{I|L}V{I|L}{I|L}{I|L};[{I|L}A][DG]PV{I|L}V{I|L}{I|L};[VP]EVQ{I|L}V{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}NPVV{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EPV{I|L}V{I|L}{I|L} 5.0482;4.7807;4.5017;4.4513;4.2631;4.2103;4.2033;4.1838;4.1048;3.9956 -;-;-;-;-;-;-;-;-;- 624 1 1.558 67667.9 1.0 13623 5160 18777 HBL1_DMSO_200M_050219_2,18785 HBL1_DMSO_200M_050219_2,18785,LLNPVDLLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18786 101.27 366.0 337950.0 25 0 20088.0 + 10143 FPWPKVLKI 9 129 564.3526484918425 1126.690744050485 2 564.3530761599541 MULTI CID FTMS 0 0 0 18777 142202.875 0.6439009328974241 1 -0.1064376831054687 9 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 76.82478488871298 0.0184607444814265 4 {I|L}MWPKV{I|L}K{I|L} 9 2 + 83.062 0.0 0.0 7.3722 7.3722 91.693 0.0 0.0 0.0 16.989700043360187 9.980196442047829 9.980196442047829 9.980196442047829 0 1.960409376976188 2.0 0.0 0.5356668758921829 {I|L}MWPKV{I|L}K{I|L};{I|L}MWPKV{I|L}{I|L}K;{M(Oxidation (M))|F}PWPKV{I|L}K{I|L};[WP]KV{I|L}M{I|L}K{I|L};[WP]KV{I|L}P{M(Oxidation (M))|F}K{I|L};[WP]KV{I|L}KP{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K;[WP]KVP{M(Oxidation (M))|F}{I|L}K{I|L};[WP]KV{I|L}PK{M(Oxidation (M))|F}{I|L};[WP]KVP{I|L}{M(Oxidation (M))|F}K{I|L} 7.3722;6.4864;5.8643;5.5165;5.2063;5.1848;4.9785;4.8258;4.7613;4.5157 -;-;+;-;-;-;-;-;-;- + 1222 + 1 1.558 100548.2 1.0 13624 5160 18777 HBL1_DMSO_200M_050219_2,18786 HBL1_DMSO_200M_050219_2,18786,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18787 101.28 800.0 115300.0 25 0 22833.0 -1 0 72 1167.4899446414238 3499.448004524472 3 1168.494067370892 MULTI CID FTMS 0 0 0 18777 143812.671875 0.8159090913120324 -2 0.2500457763671875 10 4 G{M(Oxidation (M))|F} 2 -1 10.969 0.0 0.0 0.31345 0.0 0.0 1943.661457748884 1348.6822940211862 3292.3437517700704 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 0.31345 - 11 + 1 1.558 72640.6 0.5400000214576721 13625 5160 18777 HBL1_DMSO_200M_050219_2,18787 HBL1_DMSO_200M_050219_2,18787, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18788 101.29 800.0 77253.0 25 0 3346.1 -1 0 102 1188.2171321149383 3561.6295669450155 3 1188.556811511517 MULTI CID FTMS 0 0 0 18777 132618.71875 1.0 0 0.0 11 4 RWQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 10 -1 26.119 0.0 0.0 0.73336 0.0 0.0 2312.058101026553 0.0 2312.058101026553 0.0 15.942124970647027 0.0 0.0 0 0.0 0.0 0.0 0.0 RWQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 0.73336 - 366 + 1 1.558 45814.1 0.5199999809265137 13626 5160 18777 HBL1_DMSO_200M_050219_2,18788 HBL1_DMSO_200M_050219_2,18788, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18789 101.3 464.0 301750.0 25 0 36404.0 + 45467 YTIPLAIKL 9 123 516.3289071550522 1030.6432613769043 2 516.8301269412041 MULTI CID FTMS 0 0 0 18777 126115.25 1.0 0 0.0 12 Unmodified _YTIPLAIKL_ ENSG00000101464|ENST00000217446|PIGU;nc|ENSG00000101464|Q9H490-2|PIGU 37.97399986684836 0.0865783450051559 4 [YT]{I|L}P{I|L}A{I|L}K{I|L} 9 0 + 38.47 0.0 0.0 3.7327 3.7327 75.279 0.0 0.0 0.0 13.320101082583813 14.520534381044506 13.320101082583813 8.534539788859949 0 0.3807196863200844 1.3979400086720375 0.0 0.2302046884880938 + + [YT]{I|L}P{I|L}A{I|L}K{I|L};[YT]{I|L}P{I|L}AK{I|L}{I|L};[{I|L}P]A{I|L}K[HQ][KP] 3.7327;2.9046;1.9969 +;-;- + 190 + 1 1.558 111657.5 1.0 13627 5160 18777 HBL1_DMSO_200M_050219_2,18789 HBL1_DMSO_200M_050219_2,18789,YTIPLAIKL True True YTIPLAIKL 101.30216 516.830126941204 1254348.375 18777.0 ENSG00000101464|ENST00000217446|PIGU;;nc|ENSG00000101464|Q9H490-2|PIGU 5.625728766123454 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18790 101.31 366.0 344540.0 25 0 24254.0 -1 LPLSGVPLMI 10 134 528.3116890565112 1054.6088251798224 2 528.3123046755791 MULTI CID FTMS 0 0 0 18777 118572.9609375 0.5329542888746478 -2 0.2500457763671875 13 Oxidation (M) _LPLSGVPLM(Oxidation (M))I_ ENSG00000164611|ENST00000352433|PTTG1;ENSG00000250254|ENST00000504686|PTTG2;ENST00000519287.1_1_5:159849240-159855685:+|nuORF;nc|ENSG00000250254|Q9NZH5|PTTG2 39.957323273325 0.1580177220464651 4 {[TV]|[{I|L}S]}PR{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 -1 + 57.385 0.0 0.0 5.4413 5.4413 54.411 0.0 0.0 0.0 0.0 7.147642715192504 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.5283773187068795 0.0 {[TV]|[{I|L}S]}PR{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]SR{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]SGV{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}PGV{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]TAA{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}T]PAA{I|L}P{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]TRVP{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]SG{I|L}VP{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}PG{I|L}VP{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}T]PRVP{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 5.4413;5.4413;5.3979;5.3979;4.5977;4.5238;4.5058;4.4328;4.4328;4.4319 -;-;-;-;-;-;-;-;-;- 2086 1 1.558 106327.1 1.0 13628 5160 18777 HBL1_DMSO_200M_050219_2,18790 HBL1_DMSO_200M_050219_2,18790,LPLSGVPLMI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18791 101.32 681.0 269670.0 25 0 24594.0 + + 19975 RLLEVPVML 9 145 535.3259864105676 1068.637419887935 2 535.3262817263603 MULTI CID FTMS 0 0 0 18777 116271.6328125 0.7913857628113641 -1 0.1587371826171875 14 Unmodified _LIKANAPVPF_ ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2 27.22323531849824 0.3570408936368626 4 {I|L}{I|L}{[RE]|[WV]}VPVM{I|L} 9 -1 + 62.852 0.0 0.0 5.8815 5.8815 78.567 0.0 0.0 0.0 3.735899786366232 16.478174818886373 3.735899786366232 3.735899786366232 0 1.424742501084005 1.3010299956639813 0.0 0.3252574989159953 {I|L}{I|L}{[RE]|[WV]}VPVM{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]VPVM{I|L};[Q{I|L}]Q[K{I|L}]PVM{I|L};[VG]{[NV]|[RG]}[K{I|L}]PVM{I|L};[YV]VP[K{I|L}]HT{I|L};[PS][KG][K{I|L}]PVM{I|L};[Q{I|L}][AG][K{I|L}]PVM{I|L} 5.8815;5.5319;3.7511;3.28;3.2531;2.9167;2.8894 -;-;-;-;-;-;- 410 1 1.558 145887.1 1.0 13629 5160 18777 HBL1_DMSO_200M_050219_2,18791 HBL1_DMSO_200M_050219_2,18791,LIKANAPVPF False False RLLEVPVML 101.32207 535.32628172636 1316627.625 18777.0 ENST00000591718.1_1_19:55966993-55972941:-|nuORF;;ENSG00000063241|ENST00000425675|ISOC2;;nc|ENSG00000063241|Q96AB3-2|ISOC2 3.058226585388184 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18792 101.33 385.0 195690.0 25 0 17130.0 + 29556 QLPNFAFSV 9 112 511.7689711118017 1021.5233892904034 2 511.7695800662041 MULTI CID FTMS 0 0 0 18777 98468.8515625 1.0 0 0.0 15 Unmodified _QLPNFAFSV_ ENSG00000141002|ENST00000263346|TCF25;ENST00000563636.5_1_16:89961526-89967207:+|nuORF;ENST00000570116.6_1_16:89962405-89970614:+|nuORF 57.47134341890925 0.0274820932774257 4 [VS]{[QD]|[EN]|[WG]|[KD]|[RS]}{[VA]|[{I|L}G]}A 7 7 30.206 0.0 0.0 2.957 0.0 0.0 0.0 348.1561908859288 348.1561908859288 9.672488015064928 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.805462187404089 1.1861818737241734 [VS]{[QD]|[EN]|[WG]|[KD]|[RS]}{[VA]|[{I|L}G]}A 2.957 - 419 1 1.558 64800.8 1.0 13630 5160 18777 HBL1_DMSO_200M_050219_2,18792 HBL1_DMSO_200M_050219_2,18792,QLPNFAFSV True True QLPNFAFSV 101.32898 511.7708 1272915.125 18777.0 ENSG00000141002|ENST00000263346|TCF25;;ENST00000570116.6_1_16:89962405-89970614:+|nuORF;;ENST00000563636.5_1_16:89961526-89967207:+|nuORF 5.480397701263428 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18793 101.34 450.0 251590.0 25 0 31351.0 + 16054 ITLEDLEQL 9 128 537.2896751038298 1072.5647972744596 2 537.2891723513603 MULTI CID FTMS 0 0 0 18777 97721.6640625 0.484306618122842 -1 0.1587371826171875 16 Unmodified _ITLEDLEQL_ ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15 97.07464715276576 0.0121042244793311 4 {[QN]|[E{I|L}]|[KN]}DT{I|L}E{I|L}[Q{I|L}] 9 4 + 73.297 0.0 0.0 6.8338 6.8338 78.704 0.0 0.0 0.0 10.78598489305491 4.762036441594191 4.762036441594191 1.817496819840656 0 0.3252574989159953 1.5228787452803376 2.071333751784365 0.0 {[QN]|[E{I|L}]|[KN]}DT{I|L}E{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}DT{I|L}{I|L}E[Q{I|L}];{[QN]|[E{I|L}]|[KN]}ES{I|L}E{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}TD{I|L}E{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}ES{I|L}{I|L}E[Q{I|L}];{[QN]|[E{I|L}]|[KN]}TD{I|L}{I|L}E[Q{I|L}];{[QN]|[E{I|L}]|[KN]}D{I|L}TE{I|L}[Q{I|L}];[{I|L}T]ED{I|L}E{I|L}[Q{I|L}];{[QN]|[E{I|L}]|[KN]}D{I|L}T{I|L}E[Q{I|L}];[{I|L}T]ED{I|L}{I|L}E[Q{I|L}] 6.8338;6.6644;6.2934;6.1619;6.1239;5.9924;5.8765;5.8282;5.7071;5.6588 -;-;-;-;-;-;-;-;-;- 2345 1 1.558 91516.6 1.0 13631 5160 18777 HBL1_DMSO_200M_050219_2,18793 HBL1_DMSO_200M_050219_2,18793,ITLEDLEQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18795 101.34 9.8 7561200.0 25 0 1016300.0 + 25618 NFPEHIFPAL 10 83 592.8085179881461 1183.6024830430922 2 592.8090087771416 MULTI CID FTMS 0 0 0 18794 5550335.5 0.9001631061826602 -6 0.5424652099609375 1 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 34.221707139014875 0.2185845369562963 4 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 8 8 49.139 0.0 0.0 4.1517 0.0 0.0 0.0 126.03573023013908 126.03573023013908 21.17041603016684 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.4247425010840047 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 4.1517 - 645 + 1 1.553 62820.0 1.0 13632 5161 18794 HBL1_DMSO_200M_050219_2,18795 HBL1_DMSO_200M_050219_2,18795,NFPEHIFPAL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18796 101.34 112.0 4019800.0 25 0 210130.0 -1 0 163 1162.887404097417 3485.640382892452 3 1163.557177722454 MULTI CID FTMS 0 0 0 18794 2542869.0 0.849285618145122 1 -0.0757522583007812 2 4 H{I|L}GNGA{I|L}{M(Oxidation (M))|F}KV 10 -1 80.368 0.0 0.0 2.3057 0.0 0.0 0.0 2446.03894165712 2446.03894165712 27.54757134698829 0.0 0.0 0.0 0 0.5 0.0 0.0 2.024227503252014 H{I|L}GNGA{I|L}{M(Oxidation (M))|F}KV 2.3057 - 8648 + 1 1.553 274518.6 1.0 13633 5161 18794 HBL1_DMSO_200M_050219_2,18796 HBL1_DMSO_200M_050219_2,18796, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18797 101.35 55.0 1207900.0 25 0 139110.0 + 25952 NLPDEEIFQQL 11 80 673.3348561242276 1344.655159315255 2 673.3358642458916 MULTI CID FTMS 0 0 0 18794 895203.5 0.2295479670231223 2 -0.108489990234375 3 Unmodified _NLPDEEIFQQL_ ENSG00000169019|ENST00000381571|COMMD8 55.50274090549119 0.0873970505193986 4 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F} 8 6 48.344 0.0 0.0 3.5953 0.0 0.0 0.0 384.18775883354937 384.18775883354937 15.72917652463456 0.0 0.0 0.0 0 0.555462187404089 0.0 0.7302046884880937 0.6382104921644451 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F} 3.5953 - 1231 1 1.553 54829.5 1.0 13634 5161 18794 HBL1_DMSO_200M_050219_2,18797 HBL1_DMSO_200M_050219_2,18797,NLPDEEIFQQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18798 101.35 193.0 374600.0 25 0 53690.0 + 36657 TAVESFLTI 9 99 490.768680998552 979.522809063904 2 490.7690002322197 MULTI CID FTMS 0 0 0 18794 347979.0 0.4107700248454133 2 -0.108489990234375 4 Unmodified _TAVESFLTI_ ENSG00000143653|ENST00000366510|SCCPDH 34.10243960390752 0.1078313939113124 4 [{I|L}T]{I|L}C(Carbamidomethyl (C))E 5 7 33.244 0.0 0.0 3.3939 0.0 0.0 0.0 360.2126033356415 360.2126033356415 10.542359562158126 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.5796896906561032 0.0 [{I|L}T]{I|L}C(Carbamidomethyl (C))E 3.3939 - 601 1 1.553 58983.2 1.0 13635 5161 18794 HBL1_DMSO_200M_050219_2,18798 HBL1_DMSO_200M_050219_2,18798,TAVESFLTI True True TAVESFLTI 101.34918 490.76900023222 7198382.0 18794.0 ENSG00000143653|ENST00000366510|SCCPDH 3.4251016775767007 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18799 101.35 131.0 842160.0 25 0 42251.0 + 6346 DVMVRIPV 8 97 928.5294922576752 927.5222157910752 1 930.5323974490166 MULTI CID FTMS 0 0 0 18794 210254.09375 0.9073070032879124 2 -0.108489990234375 5 Unmodified _DVMVRIPV_ REV__ENSG00000186417|ENST00000335449|GLDN 16.942295170755138 0.6606234159769251 4 [{I|L}V]ASV{[{M(Oxidation (M))|F}H]|[RQ]}R 8 -1 + 34.23 0.0 0.0 3.6905 3.6905 70.82 0.0 0.0 0.0 6.408103009885771 0.5676571578941036 0.5676571578941036 4.259687322722819 0 0.0 1.3010299956639813 0.3807196863200844 0.0 [{I|L}V]ASV{[{M(Oxidation (M))|F}H]|[RQ]}R;[{I|L}V]{I|L}GS{[{M(Oxidation (M))|F}H]|[RQ]}R;[{I|L}V]AVS{[{M(Oxidation (M))|F}H]|[RQ]}R;{[TV]|[{I|L}S]}G{I|L}V{[{M(Oxidation (M))|F}H]|[RQ]}R;[{I|L}V]SG{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}R;[{I|L}V]ASV[TP]{[QN]|[E{I|L}]|[KN]};[{I|L}V]{I|L}GMDA[{I|L}P];{NN|[MP]|[D{I|L}]|[EV]}GVM{I|L}A[{I|L}P];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V{[{M(Oxidation (M))|F}H]|[RQ]}R;[{I|L}V]TSD{I|L}A[{I|L}P] 3.6905;3.2312;3.0414;2.9996;2.9844;2.9539;2.7031;2.7031;2.6517;2.6432 -;-;-;-;-;-;-;-;-;- 2550 1 1.553 75636.2 1.0 13636 5161 18794 HBL1_DMSO_200M_050219_2,18799 HBL1_DMSO_200M_050219_2,18799,DVMVRIPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18800 101.36 458.0 340140.0 25 0 18062.0 + 26255 NQLEEEDMM 9 165 569.725351681182 1137.436150429164 2 569.7261840701103 MULTI CID FTMS 0 0 0 18794 218190.71875 0.6240541344227812 -3 0.3564834594726562 6 Unmodified _NQLEEEDMM_ ENSG00000155629|ENST00000339364|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1 42.09456458481378 0.0639583784996157 4 NQ{I|L}[Y{M(Oxidation (M))|F}]{[YC]|[HE]}GM 9 4 + 32.716 0.0 0.0 2.8763 2.8763 71.257 0.0 0.0 0.0 3.559342369988613 3.645162531850872 3.559342369988613 6.449018044899606 0 0.3807196863200844 0.5086383061657274 1.3494850021680094 0.3494850021680094 NQ{I|L}[Y{M(Oxidation (M))|F}]{[YC]|[HE]}GM;NQ{I|L}[Y{M(Oxidation (M))|F}]DDSH;NQ[C(Carbamidomethyl (C))C][C(Carbamidomethyl (C))M]P{I|L}{I|L};NQ{I|L}[Y{M(Oxidation (M))|F}]C(Carbamidomethyl (C))YM;GGQDD[Y{M(Oxidation (M))|F}]{I|L}[HS];GGQDD[QP]Q{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QN]|[E{I|L}]|[KN]}DD[Y{M(Oxidation (M))|F}]{I|L}[HS];GGAGDD[Y{M(Oxidation (M))|F}]{I|L}[HS];{[{M(Oxidation (M))|F}H]|[RQ]}{[YC]|[HE]}[EC]{I|L}[HS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}YYE{I|L} 2.8763;2.3093;2.2936;1.8099;1.5292;0.60781;0.58881;0.52043;0.41388;0.33606 -;-;-;-;-;-;-;-;-;- 678 + 1 1.553 118232.8 1.0 13637 5161 18794 HBL1_DMSO_200M_050219_2,18800 HBL1_DMSO_200M_050219_2,18800,NQLEEEDMM True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18801 101.37 301.0 318880.0 25 0 40973.0 + 17091 KLFDDMMYEL 10 88 652.7984969134358 1303.5824408936714 2 652.7986938357353 MULTI CID FTMS 0 0 0 18794 208225.40625 0.363380142049117 -4 0.4380264282226562 7 Unmodified _KLFDDMMYEL_ ENSG00000000460|ENST00000359326|C1orf112 71.70789743142352 0.0188816056000227 4 [YE]{I|L}{[NV]|[RG]}MMYE{I|L} 10 5 + 79.729 0.0 0.0 6.1161 6.1161 84.846 0.0 0.0 0.0 8.965912507003608 16.53212513775344 8.965912507003608 8.965912507003608 0 0.6549471895720984 1.5228787452803376 1.2302046884880935 0.3252574989159953 [YE]{I|L}{[NV]|[RG]}MMYE{I|L};{[QN]|[E{I|L}]|[KN]}Y{[NV]|[RG]}MMYE{I|L};[YE]{I|L}{[NV]|[RG]}D{M(Oxidation (M))|F}YE{I|L};[K{I|L}]{M(Oxidation (M))|F}DDMMYE{I|L};[YE]M[TP]KMYE{I|L};{[QN]|[E{I|L}]|[KN]}Y{[NV]|[RG]}D{M(Oxidation (M))|F}YE{I|L};[YE]M[TP]MKYE{I|L};[YE]{I|L}{[NV]|[RG]}DE[Y{M(Oxidation (M))|F}]{I|L};[YE]{I|L}{[NV]|[RG]}M{[YC]|[HE]}[RN];[YE]{I|L}YYM[Y{M(Oxidation (M))|F}]{I|L} 6.1161;5.4283;5.4243;5.0573;4.8666;4.7365;4.0046;2.8068;2.4263;2.3459 -;-;-;+;-;-;-;-;-;- + 524 1 1.553 76212.7 1.0 13638 5161 18794 HBL1_DMSO_200M_050219_2,18801 HBL1_DMSO_200M_050219_2,18801,KLFDDMMYEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18802 101.38 565.0 230980.0 25 0 12841.0 -1 0 124 1129.2051698035596 3384.593680010879 3 1129.869921863079 MULTI CID FTMS 0 0 0 18794 185161.28125 0.8550360725226941 -4 0.4380264282226562 8 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 58.109 0.0 0.0 1.7169 0.0 0.0 0.0 2343.9789088529287 2343.9789088529287 45.406075122407685 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.7169 - 718 1 1.553 86377.8 1.0 13639 5161 18794 HBL1_DMSO_200M_050219_2,18802 HBL1_DMSO_200M_050219_2,18802, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18803 101.39 545.0 133260.0 25 0 12987.0 + 13433 HLPLTCEFSI 10 99 580.2960117225989 1158.5774705119975 2 580.2964355349541 MULTI CID FTMS 0 0 0 18794 106435.2734375 1.0 0 0.0 9 Unmodified _HLPLTCEFSI_ ENSG00000022840|ENST00000325954|RNF10;nc|ENSG00000022840|Q8N5U6-2|RNF10 15.847184025352805 0.5816416552707754 4 [H{I|L}]{I|L}E{I|L}{I|L}N 7 6 53.703 0.0 0.0 4.6352 0.0 0.0 0.0 323.082389295454 323.082389295454 27.24886953798432 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.3252574989159953 0.0 [H{I|L}]{I|L}E{I|L}{I|L}N 4.6352 - 146 1 1.553 57923.1 1.0 13640 5161 18794 HBL1_DMSO_200M_050219_2,18803 HBL1_DMSO_200M_050219_2,18803,HLPLTCEFSI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18804 101.4 800.0 302840.0 25 0 48097.0 + 34746 SPYPWPLNHI 10 133 612.3143340079008 1222.6141150826015 2 612.3134643435478 MULTI CID FTMS 0 0 0 18794 105140.5625 0.2566237688897363 56 -2.042640686035156 10 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 85.64151623876279 0.0124443716933876 4 [PS]YPW{I|L}PNH{I|L} 10 2 + 71.231 0.0 0.0 5.8261 5.8261 76.069 0.0 0.0 0.0 18.3581132860661 2.562441647339071 2.562441647339071 2.562441647339071 0 1.4604093769761874 1.5228787452803376 0.0 1.329689690656103 [PS]YPW{I|L}PNH{I|L};[PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}P[HQ]V;[PS]YPWV[QP]H{I|L};[PS]YPWV[{I|L}P][HQ];[PS]YPW{I|L}PGGH{I|L};[PS]Y{I|L}[WP]PNH{I|L};[PS]Y{I|L}[WP]PV[HQ];[PS]YP{[DA]|[EG]}{I|L}[RH]AP;[PS]Y{I|L}[WP]PGGH{I|L} 5.8261;5.6166;4.5028;4.3792;4.1696;3.989;3.6905;3.4809;3.0552;2.3692 -;-;-;-;-;-;-;-;-;- 1848 + 1 1.553 179042.3 0.4600000083446502 13641 5161 18794 HBL1_DMSO_200M_050219_2,18804 HBL1_DMSO_200M_050219_2,18804,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18805 101.41 800.0 230300.0 25 0 28116.0 + 45834 YYPEYKLLF 9 112 618.3209594205575 1234.627365907915 2 618.3213989138603 MULTI CID FTMS 0 0 0 18794 101492.859375 0.6982332359829975 -4 0.4380264282226562 11 Unmodified _YYPEYKLLF_ ENSG00000159720|ENST00000290949|ATP6V0D1 25.399314129420983 0.2080152500878129 4 [EP]YK{I|L}{I|L} 6 3 51.145 0.0 0.0 4.1426 0.0 0.0 0.0 488.18111972657897 488.18111972657897 0.5372751160733458 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.75 0.0 + [EP]YK{I|L}{I|L} 4.1426 + + 553 1 1.553 139772.7 0.449999988079071 13642 5161 18794 HBL1_DMSO_200M_050219_2,18805 HBL1_DMSO_200M_050219_2,18805,YYPEYKLLF False True YYPEYKLLF 101.41271 618.32139891386 1526399.125 18794.0 ENSG00000159720|ENST00000290949|ATP6V0D1 4.667754014333089 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18807 101.42 250.0 354040.0 25 0 26316.0 -1 0 88 698.1349425506107 3485.638330420053 5 698.3364745974541 MULTI CID FTMS 0 0 0 18806 267174.46875 0.8268524283664255 1 -0.0327377319335937 1 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 39.914 0.0 0.0 1.1451 0.0 0.0 0.0 2544.0912670230346 2544.0912670230346 4.235614994820836 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.1451 - 890 1 1.553 76049.3 1.0 13643 5162 18806 HBL1_DMSO_200M_050219_2,18807 HBL1_DMSO_200M_050219_2,18807, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18808 101.43 389.0 362550.0 25 0 87099.0 + 10138 FPWPKVLKI 9 113 376.5708211178986 1126.690633953896 3 376.5706664919853 MULTI CID FTMS 0 0 0 18806 221287.171875 0.7944276336293388 2 -0.0843505859375 2 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 28.49450938151212 0.1686335738423394 4 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 50.805 0.0 0.0 4.5092 4.5092 84.744 0.0 0.0 0.0 22.72160958700539 7.166987712964499 7.166987712964499 50.804972379017386 0 0.2742275032520141 0.0 0.0 0.2302046884880938 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 4.5092 + + 295 + 1 1.553 118254.9 1.0 13644 5162 18806 HBL1_DMSO_200M_050219_2,18808 HBL1_DMSO_200M_050219_2,18808,FPWPKVLKI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18809 101.43 177.0 535290.0 25 0 98138.0 + 5028 DGWKFEQLI 9 118 568.2927409624702 1134.5709289917404 2 568.2934448122978 MULTI CID FTMS 0 0 0 18806 363192.71875 0.8371471771034965 -3 0.3409271240234375 3 Unmodified _DGWKFEQLI_ ENSG00000180901|ENST00000322444|KCTD2 55.50274090549119 0.0285720310785888 4 [DG]WK{M(Oxidation (M))|F}EQ{I|L}{I|L} 9 0 + 79.394 0.0 0.0 6.9977 6.9977 89.433 0.0 0.0 0.0 17.61484602226524 16.478174818886373 16.478174818886373 9.208187539523747 0 1.25 0.8239087409443188 1.579689690656103 0.3807196863200844 + + [DG]WK{M(Oxidation (M))|F}EQ{I|L}{I|L};[DG]WK{M(Oxidation (M))|F}E[AG]{I|L}{I|L};[DG]WK{M(Oxidation (M))|F}QE{I|L}{I|L};[AG]E{M(Oxidation (M))|F}[NP]{M(Oxidation (M))|F}Q{I|L}{I|L};[AG]E{[NV]|[RG]}YEQ{I|L}{I|L};[DG]WK{M(Oxidation (M))|F}[AG]E{I|L}{I|L};[{M(Oxidation (M))|F}E]Q[NP]{M(Oxidation (M))|F}Q{I|L}{I|L};[AG]E{M(Oxidation (M))|F}KWGD{I|L}{I|L};[DG]WK{M(Oxidation (M))|F}AAD{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[NP]{M(Oxidation (M))|F}Q{I|L}{I|L} 6.9977;6.1861;6.1567;5.4452;5.3513;5.3451;5.1969;5.0589;5.0371;4.8989 +;-;-;-;-;-;-;-;-;- + 1361 1 1.553 74739.1 1.0 13645 5162 18806 HBL1_DMSO_200M_050219_2,18809 HBL1_DMSO_200M_050219_2,18809,DGWKFEQLI True True DGWKFEQLI 101.43157 568.293444812298 7350261.5 18806.0 ENSG00000180901|ENST00000322444|KCTD2 4.627095301946004 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18810 101.44 321.0 341290.0 25 0 36334.0 + 34009 SLISTYFHV 9 128 533.7841276403864 1065.5537023475729 2 533.7853881716728 MULTI CID FTMS 0 0 0 18806 127591.7578125 0.5651349673550911 -4 0.4322357177734375 4 Unmodified _SLISTYFHV_ ENST00000336838.10_1_2:55646279-55646603:-|nuORF 42.09456458481378 0.0639583784996157 4 {[TV]|[{I|L}S]}{I|L}[W{M(Oxidation (M))|F}]G[KC]{I|L} 9 6 + 41.065 0.0 0.0 3.8539 3.8539 64.189 0.0 0.0 0.0 8.008301716835362 5.617604732835645 5.617604732835645 0.4575749056067479 0 0.9247425010840048 2.0 0.0 0.4247425010840047 {[TV]|[{I|L}S]}{I|L}[W{M(Oxidation (M))|F}]G[KC]{I|L};{[TV]|[{I|L}S]}{I|L}[W{M(Oxidation (M))|F}][C(Carbamidomethyl (C))K]{I|L};[QP]PPN[KS]W{I|L};[QP]PP[YK]HS{I|L};[QP]PPN[WK]S{I|L};[QP]PP[YK]TVH;[QP]P[WR]{M(Oxidation (M))|F}VH;{I|L}{I|L}S[W{M(Oxidation (M))|F}]G[KC]{I|L};[QP]PPGG[KS]W{I|L};{I|L}{I|L}S[W{M(Oxidation (M))|F}][C(Carbamidomethyl (C))K]{I|L} 3.8539;3.811;2.9131;2.5648;2.5648;2.3959;2.3529;2.0492;2.049;2.0062 -;-;-;-;-;-;-;-;-;- 421 1 1.553 88302.4 1.0 13646 5162 18806 HBL1_DMSO_200M_050219_2,18810 HBL1_DMSO_200M_050219_2,18810,SLISTYFHV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18811 101.45 456.0 336600.0 25 0 69693.0 34108 SLLPNIYVL 9 133 516.3107721945563 1030.6069914559123 2 516.3121826052666 MULTI CID FTMS 0 0 0 18806 100304.765625 0.865473421142517 -2 0.18218994140625 5 Unmodified _SLLPNIYVL_ ENST00000302503.7_1_11:47640451-47647231:-|nuORF 26.88365393820708 0.1891292719743517 4 VT{I|L}D[{I|L}P]{M(Oxidation (M))|F}KV 9 7 + 68.513 0.0 0.0 6.6478 6.6478 83.898 0.0 0.0 0.0 35.58099608503025 5.711892870880277 5.711892870880277 5.711892870880277 0 0.9876954943324544 2.0 0.0 0.1803115997617927 VT{I|L}D[{I|L}P]{M(Oxidation (M))|F}KV;VT{I|L}D{[ET]|[MV]}{I|L}K{I|L};VT[{M(Oxidation (M))|F}V]V[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};VPV[YE]A{I|L}K{I|L};VPV[HT][HT]K{I|L};VP[YR]QQK{I|L};VP[YR][RN]KV;VPV[YE]VVKV;V{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}P]A{I|L}K{I|L} 6.6478;6.0936;4.0132;2.8073;2.6636;2.3049;2.228;2.1733;0.45196 -;-;-;-;-;-;-;-;- 437 + 1 1.553 123563.5 1.0 13647 5162 18806 HBL1_DMSO_200M_050219_2,18811 HBL1_DMSO_200M_050219_2,18811,SLLPNIYVL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18813 101.46 800.0 163330.0 25 0 10550.0 -1 0 133 803.758288570014 2408.253036310242 3 804.0882446169853 MULTI CID FTMS 0 0 0 18812 104092.8828125 0.6209044384505407 3 -0.15771484375 1 4 [H{I|L}]VEA{I|L}Y{I|L}[WD]MV[MN]T{M(Oxidation (M))|F} 16 -1 75.766 0.0 0.0 3.1461 0.0 0.0 0.0 442.2352653215409 442.2352653215409 51.94328470624591 0.0 0.0 0.0 0 1.805462187404089 1.5228787452803376 0.2742275032520141 0.0 [H{I|L}]VEA{I|L}Y{I|L}[WD]MV[MN]T{M(Oxidation (M))|F} 3.1461 - 3066 1 1.553 94042.1 0.4099999964237213 13648 5163 18812 HBL1_DMSO_200M_050219_2,18813 HBL1_DMSO_200M_050219_2,18813, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18814 101.48 800.0 144140.0 25 0 13876.0 + 45615 YVLDINSIDNL 11 121 639.8325419359924 1277.6505309387846 2 639.8325683474541 MULTI CID FTMS 0 0 0 18812 115267.2421875 0.2211770899367725 -5 0.4649734497070312 2 Unmodified _YVLDINSIDNL_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 61.60191391372663 0.0626439052904852 4 {NN|[MP]|[D{I|L}]|[EV]}NS{I|L}P{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]N{I|L} 11 7 + 62.952 0.0 0.0 4.9271 4.9271 70.913 0.0 0.0 0.0 1.6055302893080707 16.008821460303793 1.6055302893080707 1.791195523783685 0 0.6069758080123702 1.3979400086720375 1.009053043163611 1.486346736360778 {NN|[MP]|[D{I|L}]|[EV]}NS{I|L}P{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}SN{I|L}P{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}NS{I|L}{I|L}M[{M(Oxidation (M))|F}V]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}SN{I|L}{I|L}M[{M(Oxidation (M))|F}V]N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}SD{I|L}{I|L}MNPYV;{[QV]|[N{I|L}]|[RA]|[KV]}SD{I|L}P{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]N{I|L};[YV]{I|L}D{I|L}NS{I|L}DN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}SD{I|L}{I|L}M[{M(Oxidation (M))|F}V]N{I|L};[YV]EV{I|L}NS{I|L}DN{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGS{I|L}P{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]N{I|L} 4.9271;4.7869;4.7773;4.6371;4.6358;4.4584;4.3752;4.3086;4.2374;4.2127 -;-;-;-;-;-;+;-;-;- + 6072 1 1.553 94460.7 0.4699999988079071 13649 5163 18812 HBL1_DMSO_200M_050219_2,18814 HBL1_DMSO_200M_050219_2,18814,YVLDINSIDNL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18815 101.49 800.0 102490.0 25 0 21054.0 -1 0 97 733.3826470486205 2197.1261117460613 3 733.7180053591728 MULTI CID FTMS 0 0 0 18812 103697.4921875 1.0 0 0.0 3 4 W{M(Oxidation (M))|F}{I|L}{I|L} 4 -1 33.928 0.0 0.0 1.5442 0.0 0.0 0.0 1634.7701929304335 1634.7701929304335 -0.2081220072886225 0.0 -0.2081220072886225 0.0 0 0.5 0.0 0.0 0.0 W{M(Oxidation (M))|F}{I|L}{I|L} 1.5442 - 679 + 1 1.553 68571.9 0.4300000071525574 13650 5163 18812 HBL1_DMSO_200M_050219_2,18815 HBL1_DMSO_200M_050219_2,18815, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18816 101.5 431.0 95545.0 25 0 5992.9 -1 0 72 878.6563578566561 0 878.9037963747978 PEAK CID FTMS 0 0 0 18812 24413.4375 0.3608191416164211 3 -0.15771484375 4 4 V{I|L}{I|L}VQ 5 -1 26.454 0.0 0.0 1.5071 0.0 0.0 877.7672671003818 322.1428316705688 1199.9100987709503 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}{I|L}VQ 1.5071 - 76 + 1 1.553 38845.2 1.0 13651 5163 18812 HBL1_DMSO_200M_050219_2,18816 HBL1_DMSO_200M_050219_2,18816, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18818 101.5 8.9 11187000.0 25 0 849130.0 -1 0 84 872.4171467820075 3485.63948126163 4 872.9195434451103 MULTI CID FTMS 0 0 0 18817 9518293.0 0.5694830499946213 4 -0.2005691528320312 1 4 [H{I|L}]VEA{I|L}Y{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}G 12 -1 44.039 0.0 0.0 1.2634 0.0 0.0 0.0 2066.9655060021173 2066.9655060021173 14.129712596891151 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}G 1.2634 - 313 1 1.553 79001.8 1.0 13652 5164 18817 HBL1_DMSO_200M_050219_2,18818 HBL1_DMSO_200M_050219_2,18818, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18819 101.5 37.0 2747100.0 25 0 426920.0 + 29745 QPPPPPLWI 9 96 522.7973750860575 1043.580197238915 2 522.7978393435478 MULTI CID FTMS 0 0 0 18817 1421435.25 0.5809065722570455 3 -0.1608505249023437 2 Unmodified _QPPPPPLWI_ ENSG00000135045|ENST00000376854|C9orf40 70.71552829651908 0.0208223590022201 4 [QP]PPP[{I|L}P]W{I|L} 9 0 + 26.348 0.0 0.0 2.5247 2.5247 70.095 0.0 0.0 0.0 5.889503991608116 2.64908724233678 2.64908724233678 5.889503991608116 0 1.9731975075880328 0.0 0.0 1.416386562212267 + + [QP]PPP[{I|L}P]W{I|L};{[HG]|PP}QPP[{I|L}P]W{I|L};{[HG]|PP}{I|L}PP[QP]W{I|L};{[HG]|PP}[AG]PP[{I|L}P]W{I|L};[QP][YK][{I|L}P]W{I|L} 2.5247;1.9604;1.5149;0.12778;0.030362 +;-;-;-;- + 171 1 1.553 84792.3 1.0 13653 5164 18817 HBL1_DMSO_200M_050219_2,18819 HBL1_DMSO_200M_050219_2,18819,QPPPPPLWI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18820 101.51 103.0 1378200.0 25 0 90427.0 -1 0 116 847.1560649459955 3384.5951539175817 4 847.6580688357353 MULTI CID FTMS 0 0 0 18817 897238.25 0.8821781999949242 -1 0.0516128540039062 3 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 46.604 0.0 0.0 1.3769 0.0 0.0 0.0 2343.982201464825 2343.982201464825 0.3174312876055296 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.3769 - 863 1 1.553 103854.9 1.0 13654 5164 18817 HBL1_DMSO_200M_050219_2,18820 HBL1_DMSO_200M_050219_2,18820, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18821 101.51 261.0 329340.0 25 0 29631.0 + 12065 GQFEELLRL 9 102 552.8061635542279 1103.5977741752556 2 552.8066894412041 MULTI CID FTMS 0 0 0 18817 163823.84375 0.2986066254866404 3 -0.1608505249023437 4 Unmodified _GQFEELLRL_ ENSG00000108010|ENST00000331244|GLRX3 53.832793166522166 0.0319663582346103 4 {[QG]|[NA]}{M(Oxidation (M))|F}EE{I|L}{I|L}R{I|L} 9 0 + 74.513 0.0 0.0 6.7518 6.7518 92.465 0.0 0.0 0.0 55.10268281897635 11.47817481888638 11.47817481888638 22.55780949711785 0 0.9247425010840048 0.958607314841775 0.805462187404089 0.0 + + {[QG]|[NA]}{M(Oxidation (M))|F}EE{I|L}{I|L}R{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}EE{I|L}R{I|L};{[QG]|[NA]}{I|L}{M(Oxidation (M))|F}EE{I|L}R{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]{M(Oxidation (M))|F}{I|L}[WQ];{[QN]|[E{I|L}]|[KN]}[R{I|L}]{I|L}{M(Oxidation (M))|F}[WQ] 6.7518;4.7078;3.9819;1.4757;1.3161 +;-;-;-;- + 228 + 1 1.553 70903.7 1.0 13655 5164 18817 HBL1_DMSO_200M_050219_2,18821 HBL1_DMSO_200M_050219_2,18821,GQFEELLRL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18822 101.52 346.0 300910.0 25 0 60748.0 + 21710 LPLSGVPLMI 10 80 1055.615609469211 1054.608333002611 1 1055.611010730267 MULTI CID FTMS 0 0 0 18817 144962.578125 0.7107191630469747 1 -0.0437698364257812 5 Oxidation (M) _LPLSGVPLM(Oxidation (M))I_ ENSG00000164611|ENST00000352433|PTTG1;ENSG00000250254|ENST00000504686|PTTG2;ENST00000519287.1_1_5:159849240-159855685:+|nuORF;nc|ENSG00000250254|Q9NZH5|PTTG2 85.27202061508552 0.012747187882667 4 {I|L}P{I|L}SGVP{I|L}{M(Oxidation (M))|F}{I|L} 10 0 + 73.853 0.0 0.0 7.0029 7.0029 76.788 0.0 0.0 0.0 17.033248988790817 0.5550741699044437 0.5550741699044437 0.5550741699044437 0 1.9802046884880933 1.5228787452803376 0.5 0.0 + + {I|L}P{I|L}SGVP{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}P]TRVP{I|L}{M(Oxidation (M))|F}{I|L};{I|L}P{I|L}SRP{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}P]TVGVP{I|L}{M(Oxidation (M))|F}{I|L};{I|L}P{I|L}SGV{I|L}P{M(Oxidation (M))|F}{I|L};[{I|L}P][SG]V{I|L}P{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}P][SG]{I|L}VP{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}P]TAA{I|L}P{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}P]T{I|L}AAP{I|L}{M(Oxidation (M))|F}{I|L};{I|L}P{I|L}SR{I|L}P{M(Oxidation (M))|F}{I|L} 7.0029;6.9503;6.646;6.2846;6.2676;6.2616;6.2157;6.1231;6.1231;5.9107 +;-;-;-;-;-;-;-;-;- + 610 + 1 1.553 74896.2 1.0 13656 5164 18817 HBL1_DMSO_200M_050219_2,18822 HBL1_DMSO_200M_050219_2,18822,LPLSGVPLMI True False LPLSGVPLMI 101.51634 1055.61101073027 4573084.75 18817.0 ENST00000519287.1_1_5:159849240-159855685:+|nuORF;;ENSG00000164611|ENST00000352433|PTTG1;;ENSG00000250254|ENST00000504686|PTTG2;;nc|ENSG00000250254|Q9NZH5|PTTG2 6.153655370076497 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18823 101.53 751.0 321630.0 25 0 55963.0 + 26041 NMLPQIFRV 9 136 559.3127814927312 1116.6110100522624 2 559.3134033083916 MULTI CID FTMS 0 0 0 18817 137974.9375 0.1128587340921053 -5 0.4252777099609375 6 Unmodified _NMLPQIFRV_ ENSG00000047621|ENST00000261250|C12orf4;ENST00000544258.1_3_12:4598975-4611546:-|nuORF 92.8221339359638 0.0138398038803217 4 [MN]{I|L}PQ{I|L}{M(Oxidation (M))|F}RV 9 0 + 74.122 0.0 0.0 6.6381 6.6381 82.688 0.0 0.0 0.0 24.137342758552684 4.713689258305706 4.713689258305706 4.713689258305706 0 1.0 1.6989700043360187 0.0 1.7346368802282015 + + [MN]{I|L}PQ{I|L}{M(Oxidation (M))|F}RV;[MN]{I|L}PQ{I|L}V[R{M(Oxidation (M))|F}];[MN]{I|L}P[AG]{I|L}{M(Oxidation (M))|F}RV;[MN]{I|L}P[AG]{I|L}V[R{M(Oxidation (M))|F}];[MN]{I|L}VT{[RE]|[WV]}RV;[MN]V{I|L}T{[RE]|[WV]}RV;{[{M(Oxidation (M))|F}D]|MM}{I|L}[HA]{I|L}{M(Oxidation (M))|F}RV;[QP]{I|L}{M(Oxidation (M))|F}R{[NV]|[RG]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[QP]{I|L}{M(Oxidation (M))|F}R[{I|L}V][MN];[QP]{I|L}{M(Oxidation (M))|F}[KQ]{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.6381;6.2159;5.8134;5.3913;4.7348;3.4794;1.3497;1.2799;1.168;1.1463 +;-;-;-;-;-;-;-;-;- + 611 + 1 1.553 183390.4 1.0 13657 5164 18817 HBL1_DMSO_200M_050219_2,18823 HBL1_DMSO_200M_050219_2,18823,NMLPQIFRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18824 101.54 663.0 125530.0 25 0 7216.5 -1 0 139 942.9568951482393 1883.8992373632784 2 943.4606811404228 MULTI CID FTMS 0 0 0 18817 109687.953125 0.5552904884985735 -3 0.1601028442382812 7 4 [TA]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F} 7 -1 58.677 0.0 0.0 3.1146 0.0 0.0 0.0 1107.442608295172 1107.442608295172 29.0625071795742 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.8494850021680094 0.0 [TA]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F} 3.1146 - 3173 1 1.553 56031.8 1.0 13658 5164 18817 HBL1_DMSO_200M_050219_2,18824 HBL1_DMSO_200M_050219_2,18824, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18826 101.55 264.0 470190.0 25 0 121650.0 + 41770 VPVEQVLLI 9 114 505.3177315862467 1008.6209102392934 2 505.3185302615166 MULTI CID FTMS 0 0 0 18825 204701.421875 0.4846018075823706 3 -0.15679931640625 1 Unmodified _VPVEQVLLI_ ENSG00000146410|ENST00000420702|MTFR2 54.773552608820026 0.0299037012502309 4 [VP]EQVV{I|L}{I|L}{I|L} 9 2 + 56.211 0.0 0.0 5.5731 5.5731 76.562 0.0 0.0 0.0 14.49092531119419 10.330145895351848 10.330145895351848 3.2783248807594845 0 0.8182503180159344 1.2218487496163564 0.25 0.2887254899964357 [VP]EQVV{I|L}{I|L}{I|L};[VP]EVQV{I|L}{I|L}{I|L};[VP]EQV{I|L}V{I|L}{I|L};[VP]EVQ{I|L}V{I|L}{I|L};[VP]VEQV{I|L}{I|L}{I|L};[VP]E[AG]VV{I|L}{I|L}{I|L};{I|L}{I|L}N[DP]V{I|L}{I|L}{I|L};[VP]E[AG]V{I|L}V{I|L}{I|L};[VP]EV[AG]V{I|L}{I|L}{I|L};[VP]EQV{I|L}{I|L}V{I|L} 5.5731;5.248;4.9884;4.6633;4.4765;4.3739;4.1364;4.0754;4.0488;3.8957 -;-;-;-;+;-;-;-;-;- + 783 1 1.553 97095.3 1.0 13659 5165 18825 HBL1_DMSO_200M_050219_2,18826 HBL1_DMSO_200M_050219_2,18826,VPVEQVLLI True True VPVEQVLLI 101.54817 505.318530261517 3608759.25 18825.0 ENSG00000146410|ENST00000420702|MTFR2 1.5193134446938832 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18827 101.56 800.0 159730.0 25 0 28867.0 -1 0 108 1167.4899446414238 3499.448004524472 3 1167.824267566204 MULTI CID FTMS 0 0 0 18825 135488.78125 0.5134538778747834 3 -0.15679931640625 2 4 YG 2 -1 9.464 0.0 0.0 0.27044 0.0 0.0 1781.6073806004467 1494.736659110879 3276.3440397113254 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.27044 - 26 + 1 1.553 92977.1 0.7200000286102295 13660 5165 18825 HBL1_DMSO_200M_050219_2,18827 HBL1_DMSO_200M_050219_2,18827, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18828 101.57 188.0 590000.0 25 0 101650.0 + 9795 FPANVMDVI 9 101 503.2573629066841 1004.5001728801682 2 503.2575561404228 MULTI CID FTMS 0 0 0 18825 337330.75 0.5456522000665018 -4 0.2038726806640625 3 Unmodified _FPANVMDVI_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF 70.71552829651908 0.0208223590022201 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANVMDV{I|L} 9 0 + 56.889 0.0 0.0 5.6634 5.6634 75.665 0.0 0.0 0.0 2.7951491716011247 10.330145895351848 2.7951491716011247 2.7951491716011247 0 0.7429928190999391 1.3010299956639813 0.0 1.5356668758921828 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANVMDV{I|L};[PA]NV{M(Oxidation (M))|F}MDV{I|L};[PA]N{M(Oxidation (M))|F}VMDV{I|L};[PA]{M(Oxidation (M))|F}NVMDV{I|L};[PA]NV[MD]{M(Oxidation (M))|F}V{I|L};[DV][WK]MDV{I|L};[VS]{[QD]|[EN]|[WG]|[KD]|[RS]}VMDV{I|L};[DV]MN[PA]{M(Oxidation (M))|F}V{I|L};{[NV]|[RG]}[PA]{M(Oxidation (M))|F}MDV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AGGVMDV{I|L} 5.6634;5.3852;5.1771;4.4812;4.3129;4.0681;4.0354;3.9125;3.2302;3.218 +;-;-;-;-;-;-;-;-;- + 509 1 1.553 87500.8 1.0 13661 5165 18825 HBL1_DMSO_200M_050219_2,18828 HBL1_DMSO_200M_050219_2,18828,FPANVMDVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18829 101.57 234.0 520420.0 25 0 90339.0 + 39065 TVVNFLIRV 9 101 530.8293728803433 1059.6441928274864 2 530.8298217654228 MULTI CID FTMS 0 0 0 18825 180583.96875 0.4044600522795907 -3 0.1281204223632812 4 Unmodified _TVVNFLIRV_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 52.268347100219714 0.0353964759249114 4 {[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}{I|L}VR 9 2 + 83.485 0.0 0.0 7.8786 7.8786 91.633 0.0 0.0 0.0 27.147642715192504 10.658757792680888 10.658757792680888 9.208187539523747 0 0.8494850021680094 2.0 0.0 1.1989700043360187 {[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}{I|L}VR;{[TV]|[{I|L}S]}VGG{M(Oxidation (M))|F}{I|L}{I|L}VR;{[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}[RV]{I|L};{[TV]|[{I|L}S]}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}VR;{[TV]|[{I|L}S]}VGG{M(Oxidation (M))|F}{I|L}[RV]{I|L};{[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}V[R{I|L}]{I|L};{[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}V{I|L}{I|L}R;{[TV]|[{I|L}S]}VNV{M(Oxidation (M))|F}[R{I|L}]{I|L};{[TV]|[{I|L}S]}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]{I|L};{[TV]|[{I|L}S]}VVN{M(Oxidation (M))|F}[R{I|L}]{I|L} 7.8786;7.0096;6.8727;6.1091;6.0037;5.8086;5.329;5.2404;5.1032;4.9563 -;-;-;-;-;-;-;-;-;- 1508 + 1 1.553 97741.3 1.0 13662 5165 18825 HBL1_DMSO_200M_050219_2,18829 HBL1_DMSO_200M_050219_2,18829,TVVNFLIRV True True TVVNFLIRV 101.57004 530.829821765423 6655320.0 18825.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 3.207265059153239 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18830 101.58 725.0 299150.0 25 0 17305.0 + 10144 FPWPKVLKI 9 160 564.3526484918425 1126.690744050485 2 564.3526489138603 MULTI CID FTMS 0 0 0 18825 142777.875 0.6465045584318306 6 -0.3301239013671875 5 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 74.19965305603844 0.0194755241623067 4 {I|L}MWPKV{I|L}K{I|L} 9 2 + 85.324 0.0 0.0 7.5729 7.5729 84.688 0.0 0.0 0.0 16.989700043360187 4.007273248666991 4.007273248666991 4.007273248666991 0 2.234636880228201 2.0 0.0 0.5387254899964358 {I|L}MWPKV{I|L}K{I|L};{I|L}MWPKV{I|L}{I|L}K;{M(Oxidation (M))|F}PWPKV{I|L}K{I|L};[WP]KV{I|L}KP{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K;[WP]KV{I|L}M{I|L}K{I|L};[WP]KV{I|L}P{M(Oxidation (M))|F}K{I|L};[WP]KV{I|L}K{I|L}M{I|L};[WP]KV{I|L}PK{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WPKV{I|L}K{I|L} 7.5729;7.2173;6.065;5.7446;5.7093;5.6098;5.3426;5.3211;5.2102;5.011 -;-;+;-;-;-;-;-;-;+ + 2836 + 1 1.553 166488.8 1.0 13663 5165 18825 HBL1_DMSO_200M_050219_2,18830 HBL1_DMSO_200M_050219_2,18830,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18831 101.59 372.0 256190.0 25 0 49281.0 + 45730 YYFVFDHAL 9 99 587.7822946439863 1173.5500363547726 2 587.7827636599541 MULTI CID FTMS 0 0 0 18825 132340.40625 0.6669517754122134 3 -0.15679931640625 6 Unmodified _YYFVFDHAL_ ENSG00000109929|ENST00000264027|SC5D;ENST00000524683.5_1_11:121174081-121174345:+|nuORF;ENST00000531140.1_1_11:121174081-121177378:+|nuORF;ENST00000534455.5_1_11:121174081-121175207:+|nuORF 42.09456458481378 0.0639583784996157 4 YY{M(Oxidation (M))|F}V{M(Oxidation (M))|F}D[HA]{I|L} 9 0 + 61.463 0.0 0.0 5.2374 5.2374 87.917 0.0 0.0 0.0 25.61175750778215 0.6683417370659939 0.6683417370659939 61.46314522391382 0 0.805462187404089 2.0 0.0 0.0 + + YY{M(Oxidation (M))|F}V{M(Oxidation (M))|F}D[HA]{I|L} 5.2374 + + 438 + 1 1.553 75449.0 1.0 13664 5165 18825 HBL1_DMSO_200M_050219_2,18831 HBL1_DMSO_200M_050219_2,18831,YYFVFDHAL True True YYFVFDHAL 101.58933 587.782763659954 1842408.5 18825.0 ENST00000534455.5_1_11:121174081-121175207:+|nuORF;;ENST00000524683.5_1_11:121174081-121174345:+|nuORF;;ENST00000531140.1_1_11:121174081-121177378:+|nuORF;;ENSG00000109929|ENST00000264027|SC5D 6.720577557881673 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18832 101.6 800.0 201700.0 25 0 31919.0 + 38807 TVFDLPKFSV 10 151 576.8173823952072 0 576.8176757693291 PEAK CID FTMS 0 0 0 18825 112781.0078125 1.0 0 0.0 7 Unmodified _TVFDLPKFSV_ ENSG00000132436|ENST00000433017|FIGNL1;nc|ENSG00000132436|Q6PIW4-2|FIGNL1 49.52724829834842 0.051481045030324 4 {M(Oxidation (M))|F}D{I|L}PK 5 5 36.102 0.0 0.0 3.1349 0.0 0.0 200.11186422665412 348.15717493228755 548.2690391589417 0.0 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.3494850021680094 0.0 + {M(Oxidation (M))|F}D{I|L}PK 3.1349 + + 1753 + 1 1.553 123899.6 0.4199999868869781 13665 5165 18825 HBL1_DMSO_200M_050219_2,18832 HBL1_DMSO_200M_050219_2,18832,TVFDLPKFSV True True TVFDLPKFSV 101.60316 576.817675769329 848883.4375 18825.0 ENSG00000132436|ENST00000433017|FIGNL1;;nc|ENSG00000132436|Q6PIW4-2|FIGNL1 6.283090750376384 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18834 101.61 8.7 10199000.0 25 0 1341300.0 + 25619 NFPEHIFPAL 10 101 592.8085179881461 1183.6024830430922 2 592.8090698122978 MULTI CID FTMS 0 0 0 18833 6076262.5 0.9854588656814016 -1 0.0623321533203125 1 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 77.04852534044906 0.0187095815199658 4 S{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}N{M(Oxidation (M))|F}PA{I|L} 9 5 60.785 0.0 0.0 5.1356 0.0 0.0 129.05833632636876 0.0 129.05833632636876 0.0 32.40778928100886 0.0 0.0 0 1.079689690656103 0.0 0.3494850021680094 0.7134679910804405 S{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}N{M(Oxidation (M))|F}PA{I|L} 5.1356 - 1375 1 1.556 70024.6 1.0 13666 5166 18833 HBL1_DMSO_200M_050219_2,18834 HBL1_DMSO_200M_050219_2,18834,NFPEHIFPAL True True NFPEHIFPAL 101.60785 592.809069812298 989905280.0 18833.0 ENSG00000138071|ENST00000260641|ACTR2;;nc|ENSG00000138071|P61160-2|ACTR2 8.037419001261393 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18835 101.61 267.0 2268600.0 25 0 112870.0 -1 0 184 1162.887404097417 3485.640382892452 3 1163.556689441204 MULTI CID FTMS 0 0 0 18833 1212696.5 0.405025070746832 6 -0.2823944091796875 2 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 64.843 0.0 0.0 1.8603 0.0 0.0 0.0 2445.024557586973 2445.024557586973 1.4146363129860262 0.0 0.0 0.0 0 2.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8603 - 16387 1 1.556 361752.9 1.0 13667 5166 18833 HBL1_DMSO_200M_050219_2,18835 HBL1_DMSO_200M_050219_2,18835, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18836 101.62 156.0 618930.0 25 0 46432.0 + -1 PDGKECECI 9 104 525.7175110537321 1049.420469174264 2 525.7178222537041 MULTI CID FTMS 0 0 0 18833 214250.265625 0.950715198749983 -2 0.1061019897460937 3 Carbamidomethyl (C) _PDGKEC(Carbamidomethyl (C))ECI_ REV__ENSG00000215018|ENST00000399429|COL28A1;REV__nc|ENSG00000215018|Q2UY09-2|COL28A1;REV__nc|ENSG00000215018|Q2UY09-3|COL28A1 8.593279151180031 0.6146971463335029 4 [DP]{M(Oxidation (M))|F}{I|L}EK 6 -1 35.864 0.0 0.0 3.4175 0.0 0.0 0.0 317.0270725280329 317.0270725280329 3.806876187093948 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [DP]{M(Oxidation (M))|F}{I|L}EK 3.4175 - 332 1 1.556 81088.6 1.0 13668 5166 18833 HBL1_DMSO_200M_050219_2,18836 HBL1_DMSO_200M_050219_2,18836,PDGKECECI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18837 101.62 399.0 780630.0 25 0 53878.0 + 7770 ELFTGFIKV 9 199 527.3022323740437 1052.5899118148873 2 527.3026611208916 MULTI CID FTMS 0 0 0 18833 140332.46875 0.5605429427762101 2 -0.0944671630859375 4 Unmodified _ELFTGFIKV_ ENSG00000162298|ENST00000377190|SYVN1;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;nc|ENSG00000162298|Q86TM6-2|SYVN1;nc|ENSG00000162298|Q86TM6-3|SYVN1 41.8396318013385 0.0653578398400075 4 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TG{M(Oxidation (M))|F}{I|L}KV 9 0 + 47.197 0.0 0.0 4.4839 4.4839 74.837 0.0 0.0 0.0 20.78756898925321 5.2827377716704405 5.2827377716704405 5.2827377716704405 0 0.2742275032520141 1.6989700043360187 0.3252574989159953 0.1595680409956017 + + {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TG{M(Oxidation (M))|F}{I|L}KV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TG{M(Oxidation (M))|F}{I|L}VK;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P{I|L}[QP]P{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ETG{M(Oxidation (M))|F}{I|L}KV;[{M(Oxidation (M))|F}E]{I|L}TG{M(Oxidation (M))|F}{I|L}KV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ETG{M(Oxidation (M))|F}{I|L}VK;[{M(Oxidation (M))|F}E]{I|L}TG{M(Oxidation (M))|F}{I|L}VK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EP{I|L}[QP]P{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]{[RE]|[WV]}PV;[{M(Oxidation (M))|F}E]{I|L}P{I|L}[QP]P{I|L} 4.4839;3.982;2.5848;2.2609;1.9222;1.7591;1.4203;0.67084;0.39905;0.33211 +;-;-;-;-;-;-;-;-;- + 2410 + 1 1.556 238905.6 1.0 13669 5166 18833 HBL1_DMSO_200M_050219_2,18837 HBL1_DMSO_200M_050219_2,18837,ELFTGFIKV True True ELFTGFIKV 101.62308 527.302661120892 3942893.75 18833.0 ENSG00000162298|ENST00000377190|SYVN1;;nc|ENSG00000162298|Q86TM6-2|SYVN1;;ENST00000449943.5_1_11:64897669-64899838:-|nuORF;;nc|ENSG00000162298|Q86TM6-3|SYVN1 6.23538335164388 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18838 101.64 800.0 132910.0 25 0 11736.0 + 25953 NLPDEEIFQQL 11 120 673.3348561242276 1344.655159315255 2 673.3357421755791 MULTI CID FTMS 0 0 0 18833 106107.5625 0.0272080876109777 7 -0.2941970825195312 5 Unmodified _NLPDEEIFQQL_ ENSG00000169019|ENST00000381571|COMMD8 78.06048673739656 0.0090990320965632 4 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F} 8 6 54.924 0.0 0.0 4.0846 0.0 0.0 0.0 384.1824169658989 384.1824169658989 17.934027353033436 0.0 0.0 0.0 0 0.6505149978319906 0.744727494896694 0.6989700043360187 0.6382104921644451 [DP]EE{I|L}N{I|L}{M(Oxidation (M))|F} 4.0846 - 3020 1 1.556 83525.2 0.4300000071525574 13670 5166 18833 HBL1_DMSO_200M_050219_2,18838 HBL1_DMSO_200M_050219_2,18838,NLPDEEIFQQL True True NLPDEEIFQQL 101.63692 673.335742175579 136488288.0 18833.0 ENSG00000169019|ENST00000381571|COMMD8 6.308607896169026 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18839 101.65 800.0 211220.0 25 0 15310.0 + 45024 YPVIIHLI 8 126 484.3025239010914 966.5904948689828 2 484.3024780154228 MULTI CID FTMS 0 0 0 18833 96468.984375 0.925015218366137 -2 0.1061019897460937 6 Unmodified _YPVIIHLI_ ENSG00000066322|ENST00000372458|ELOVL1;ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1 91.9271458047738 0.0604859098640942 4 YPV{I|L}{I|L}H{I|L}{I|L} 8 0 + 73.358 0.0 0.0 7.5893 7.5893 86.76 0.0 0.0 0.0 24.99282213420201 11.453650195120844 11.453650195120844 5.708705367622429 0 1.5044321917401078 1.6989700043360187 0.0 0.0 + + YPV{I|L}{I|L}H{I|L}{I|L};YPV{I|L}{I|L}{I|L}H{I|L};[H{I|L}]{I|L}VPY{I|L}{I|L};[H{I|L}]{I|L}V{I|L}{M(Oxidation (M))|F}{I|L}{I|L};[VP]{I|L}{I|L}HY{I|L}{I|L};[VP]{I|L}{I|L}YH{I|L}{I|L};[VP][KG]{I|L}{I|L}V{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}{I|L}H{I|L}{I|L};[H{I|L}]{I|L}{I|L}V{M(Oxidation (M))|F}{I|L}{I|L};Y{I|L}[VP]{I|L}H{I|L}{I|L} 7.5893;6.9987;4.8465;4.3529;4.1234;4.0178;3.9694;3.9636;3.8593;3.6299 +;-;-;-;-;-;-;+;-;- + 394 + 1 1.556 133136.8 0.9700000286102296 13671 5166 18833 HBL1_DMSO_200M_050219_2,18839 HBL1_DMSO_200M_050219_2,18839,YPVIIHLI True True YPVIIHLI 101.65074 484.302478015423 1689288.875 18833.0 nc|ENSG00000066322|Q9BW60-2|ELOVL1;;ENSG00000066322|ENST00000372458|ELOVL1;;ENST00000470968.6_1_1:43829589-43833598:-|nuORF 4.439253489176433 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18840 101.66 400.0 93777.0 25 0 14791.0 + -1 AVVPGTLLL 9 73 882.1559158783734 3524.5945576470936 4 882.4089233279228 MULTI CID FTMS 0 0 0 18833 93667.6328125 1.0 0 0.0 7 nc|ENSG00000105369|P11912-2|CD79A;ENSG00000105369|ENST00000221972|CD79A 4 {I|L}{I|L}R{I|L} 4 -1 15.433 0.0 0.0 0.43787 0.0 0.0 2661.0429351879125 365.1836641901001 3026.2265993780125 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}R{I|L} 0.43787 - 57 + 1 1.556 37381.4 1.0 13672 5166 18833 HBL1_DMSO_200M_050219_2,18840 HBL1_DMSO_200M_050219_2,18840, False False AVVPGTLLL 101.65792 882.408923327923 0.0 18833.0 nc|ENSG00000105369|P11912-2|CD79A;;ENSG00000105369|ENST00000221972|CD79A 4.313394784927368 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18842 101.66 108.0 535660.0 25 0 78647.0 + 17092 KLFDDMMYEL 10 65 652.7984969134358 1303.5824408936714 2 652.7989379763603 MULTI CID FTMS 0 0 0 18841 443032.53125 0.7731488056011652 2 -0.1372528076171875 1 Unmodified _KLFDDMMYEL_ ENSG00000000460|ENST00000359326|C1orf112 43.9818466556824 0.1155196613165264 4 [YE][TP]KMMYE{I|L} 10 5 + 63.879 0.0 0.0 4.9003 4.9003 84.191 0.0 0.0 0.0 10.157942671832316 44.95113412721771 10.157942671832316 16.989700043360187 0 0.3494850021680094 1.5228787452803376 1.2302046884880935 0.0 [YE][TP]KMMYE{I|L};[YT][EP]KMMYE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))S]KMMYE{I|L};[YE][TP]KM[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]WWMMYE{I|L};[YT][EP]KM[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[C(Carbamidomethyl (C))S]KM[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]WWM[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}{I|L} 4.9003;3.597;3.231;2.868;2.3831;1.5646;1.1986;0.6766 -;-;-;-;-;-;-;- 209 1 1.556 51848.5 1.0 13673 5167 18841 HBL1_DMSO_200M_050219_2,18842 HBL1_DMSO_200M_050219_2,18842,KLFDDMMYEL True True KLFDDMMYEL 101.66266 652.79893797636 10965231.0 18841.0 ENSG00000000460|ENST00000359326|C1orf112 7.939913113911946 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18843 101.67 295.0 226560.0 25 0 17332.0 -1 GGQCTCKCPQ 10 101 569.725351681182 1137.436150429164 2 569.7263671755791 MULTI CID FTMS 0 0 0 18841 142709.40625 0.4081676594748959 3 -0.1893081665039062 2 2 Carbamidomethyl (C) _GGQC(Carbamidomethyl (C))TC(Carbamidomethyl (C))KCPQ_ ENST00000356978.8_1_14:90871977-90872082:+|nuORF 10.073929032068715 0.6785112666868882 4 GGQHHCC{M(Oxidation (M))|F}H{I|L} 10 -1 GGQHHC + + 17.907 14.895 2.4054 1.5744 1.5744 44.346 0.0 0.0 0.0 0.0 -4.055424493684967 -4.055424493684967 0.0 0 0.0 0.0 0.0 0.0 GGQHHCC{M(Oxidation (M))|F}H{I|L} 1.5744 - 130 + 1 1.556 56104.7 1.0 13674 5167 18841 HBL1_DMSO_200M_050219_2,18843 HBL1_DMSO_200M_050219_2,18843,GGQCTCKCPQ False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18844 101.67 134.0 864220.0 25 0 71257.0 + 11936 GMPDFLEKL 9 97 525.270178086245 1048.52580323929 2 525.2708007693291 MULTI CID FTMS 0 0 0 18841 288157.28125 0.0626777960355311 -11 0.8242721557617188 3 Unmodified _GMPDFLEKL_ ENSG00000084090|ENST00000337288|STARD7 31.26834338654808 0.1333407332142048 4 {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L} 9 0 + 43.795 0.0 0.0 4.1769 4.1769 81.459 0.0 0.0 0.0 0.130967512398783 11.399699876253775 0.130967512398783 17.016675202793717 0 0.3252574989159953 0.0 0.3252574989159953 0.0 + + {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L};{[MG]|[TS]}{I|L}[MD]{I|L}EK{I|L};{NN|[MP]|[D{I|L}]|[EV]}M{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KS]{I|L}D{I|L}{[C(Carbamidomethyl (C))G]|[NC]};{[MG]|[TS]}P[YR][{I|L}P]C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K][KP][WP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}P][R{M(Oxidation (M))|F}][WP];{[MG]|[TS]}P[K{I|L}][C(Carbamidomethyl (C))K]C{I|L};{[MG]|[TS]}P[K{I|L}][C(Carbamidomethyl (C))C]K{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[KS]D{I|L}{[C(Carbamidomethyl (C))G]|[NC]} 4.1769;2.5539;1.5058;1.1825;1.1514;1.0846;0.96291;0.9398;0.9398;0.80301 +;-;-;-;-;-;-;-;-;- + 451 + 1 1.556 94528.9 1.0 13675 5167 18841 HBL1_DMSO_200M_050219_2,18844 HBL1_DMSO_200M_050219_2,18844,GMPDFLEKL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18845 101.68 800.0 298690.0 25 0 15860.0 -1 0 155 1129.2051698035596 3384.593680010879 3 1129.543261706829 MULTI CID FTMS 0 0 0 18841 210817.78125 1.0 0 0.0 4 4 H{I|L}VQ{[DS]|[MA]|[CV]|TT}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V 9 -1 61.616 0.0 0.0 1.8205 0.0 0.0 0.0 2343.989758171156 2343.989758171156 39.397737521010825 0.0 0.0 0.0 0 1.274227503252014 0.0 0.0 1.6989700043360187 H{I|L}VQ{[DS]|[MA]|[CV]|TT}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V 1.8205 - 661 + 1 1.556 146558.5 0.7099999785423279 13676 5167 18841 HBL1_DMSO_200M_050219_2,18845 HBL1_DMSO_200M_050219_2,18845, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18846 101.69 236.0 586360.0 25 0 46462.0 -1 PLTCLCFSL 9 155 527.2586228641786 1052.5026927951571 2 527.2588989138603 MULTI CID FTMS 0 0 0 18841 150653.296875 0.9734453796783992 1 -0.0397186279296875 5 Carbamidomethyl (C) _PLTCLC(Carbamidomethyl (C))FSL_ ENST00000453732.1_1_1:1214563-1214707:+|nuORF 18.13498045792455 0.3457906370836843 4 {[TV]|[{I|L}S]}D{I|L} 4 -1 32.58 0.0 0.0 3.0955 0.0 0.0 0.0 621.2412813775999 621.2412813775999 3.952380829866833 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 {[TV]|[{I|L}S]}D{I|L} 3.0955 - 1220 + 1 1.556 111365.2 1.0 13677 5167 18841 HBL1_DMSO_200M_050219_2,18846 HBL1_DMSO_200M_050219_2,18846,PLTCLCFSL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18847 101.7 484.0 201540.0 25 0 27604.0 + 34559 SPFGQIMEI 9 119 511.2544050149882 1020.4942570967764 2 511.2543517947197 MULTI CID FTMS 0 0 0 18841 128302.984375 0.8960914115948773 -2 0.1170806884765625 6 Unmodified _SPFGQIMEI_ ENSG00000116001|ENST00000433529|TIA1;ENSG00000151923|ENST00000436547|TIAL1;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1;nc|ENSG00000151923|Q01085-2|TIAL1 56.17704186161178 0.0281986971544335 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GQS{I|L}M{[QN]|[E{I|L}]|[KN]} 9 2 + 53.693 0.0 0.0 5.2615 5.2615 53.653 0.0 0.0 0.0 6.256565231880984 7.147642715192504 6.256565231880984 0.0 0 0.0 1.2218487496163564 1.086696871556164 0.3494850021680094 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GQS{I|L}M{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NAS{I|L}M{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SGQ{I|L}M{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGAS{I|L}M{[QN]|[E{I|L}]|[KN]};[PS]{M(Oxidation (M))|F}GQ{I|L}M{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NA{I|L}SM{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GQ{I|L}SM{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSQ{I|L}M{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NAVTM{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GQVTM{[QN]|[E{I|L}]|[KN]} 5.2615;5.2615;4.8484;4.7966;4.6484;4.4752;4.4752;4.3766;4.3528;4.3528 -;-;-;-;+;-;-;-;-;- + 1379 1 1.556 77655.2 1.0 13678 5167 18841 HBL1_DMSO_200M_050219_2,18847 HBL1_DMSO_200M_050219_2,18847,SPFGQIMEI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18849 101.71 568.0 251040.0 25 0 34295.0 + 5029 DGWKFEQLI 9 162 568.2927409624702 1134.5709289917404 2 568.2931396365166 MULTI CID FTMS 0 0 0 18848 146495.375 0.3376669831434172 3 -0.1733245849609375 1 Unmodified _DGWKFEQLI_ ENSG00000180901|ENST00000322444|KCTD2 51.629811660486645 0.0367964933207742 4 [DG]WK{M(Oxidation (M))|F}EQ{I|L}{I|L} 9 0 + 56.611 0.0 0.0 4.9897 4.9897 76.816 0.0 0.0 0.0 8.239087409443187 10.330145895351848 8.239087409443187 5.325834421237516 0 1.048455006504028 0.6020599913279624 1.4308845489566888 0.4247425010840047 + + [DG]WK{M(Oxidation (M))|F}EQ{I|L}{I|L};[DG]WKE{M(Oxidation (M))|F}Q{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DK{M(Oxidation (M))|F}EQ{I|L}{I|L};[DG]WK{M(Oxidation (M))|F}E[AG]{I|L}{I|L};[{I|L}P][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}EQ{I|L}{I|L};{[{M(Oxidation (M))|F}D]|MM}[KG]WEQ{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DKE{M(Oxidation (M))|F}Q{I|L}{I|L};[DG]WKE{M(Oxidation (M))|F}[AG]{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}M{M(Oxidation (M))|F}EQ{I|L}{I|L};[{I|L}P][{M(Oxidation (M))|F}E]E{M(Oxidation (M))|F}Q{I|L}{I|L} 4.9897;4.5203;4.2635;4.1781;4.0764;3.9128;3.7941;3.7087;3.6307;3.607 +;-;-;-;-;-;-;-;-;- + 3526 1 1.556 108227.3 1.0 13679 5168 18848 HBL1_DMSO_200M_050219_2,18849 HBL1_DMSO_200M_050219_2,18849,DGWKFEQLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18850 101.71 234.0 422200.0 25 0 29476.0 + 26707 NYPAFMMEM 9 115 567.2262983389617 1132.4380437447232 2 567.2270995974541 MULTI CID FTMS 0 0 0 18848 233433.875 0.5804209850231189 -1 0.0397186279296875 2 Unmodified _NYPAFMMEM_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 81.61307344734483 0.0171259190214613 4 [YN]PA{M(Oxidation (M))|F}M 6 3 44.632 0.0 0.0 3.9412 0.0 0.0 0.0 406.1107155157322 406.1107155157322 14.331684892062754 0.0 0.0 0.0 0 0.6989700043360187 1.6989700043360187 0.0 1.805462187404089 + [YN]PA{M(Oxidation (M))|F}M 3.9412 + + 980 1 1.556 77029.2 1.0 13680 5168 18848 HBL1_DMSO_200M_050219_2,18850 HBL1_DMSO_200M_050219_2,18850,NYPAFMMEM True True NYPAFMMEM 101.71445 567.227099597454 7110748.5 18848.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 5.3183802763621015 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18851 101.72 283.0 383370.0 25 0 52233.0 + 34010 SLISTYFHV 9 102 533.7841276403864 1065.5537023475729 2 533.7831909060478 MULTI CID FTMS 0 0 0 18848 220976.0 0.9787565175626428 2 -0.1495895385742187 3 Unmodified _SLISTYFHV_ ENST00000336838.10_1_2:55646279-55646603:-|nuORF 50.855029805455786 0.0384952370514206 4 {[TV]|[{I|L}S]}{I|L}STY{M(Oxidation (M))|F}HV 9 0 + 71.429 0.0 0.0 6.7035 6.7035 77.199 0.0 0.0 0.0 25.6424927368726 1.3830269816628231 1.3830269816628231 1.3830269816628231 0 0.8494850021680094 2.0 0.6382104921644451 0.0 + + {[TV]|[{I|L}S]}{I|L}STY{M(Oxidation (M))|F}HV;{[TV]|[{I|L}S]}{I|L}STY{M(Oxidation (M))|F}VH;{[TV]|[{I|L}S]}{I|L}V[HD]{M(Oxidation (M))|F}HV;{[TV]|[{I|L}S]}{I|L}V[HD]{M(Oxidation (M))|F}VH;{[TV]|[{I|L}S]}{I|L}ST{[NV]|[RG]}{M(Oxidation (M))|F}SV;{[TV]|[{I|L}S]}{I|L}S[WK]{M(Oxidation (M))|F}SV;{[TV]|[{I|L}S]}{I|L}ST[SG][R{M(Oxidation (M))|F}]V;{[TV]|[{I|L}S]}{I|L}ST[SG][HK]H;{[TV]|[{I|L}S]}{I|L}ST[YT]N[PA];{[TV]|[{I|L}S]}{I|L}S[MN][R{M(Oxidation (M))|F}]V 6.7035;6.5737;5.263;5.1332;4.8674;4.8194;3.7971;3.6673;3.5409;3.4781 +;-;-;-;-;-;-;-;-;- + 480 + 1 1.556 88025.2 1.0 13681 5168 18848 HBL1_DMSO_200M_050219_2,18851 HBL1_DMSO_200M_050219_2,18851,SLISTYFHV True True SLISTYFHV 101.71967 533.783190906048 1981476.375 18848.0 ENST00000336838.10_1_2:55646279-55646603:-|nuORF 7.937319437662761 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18852 101.73 433.0 257350.0 25 0 31400.0 -1 MECDACGMQPA 11 89 586.2002600339696 1170.385967134739 2 586.2010375857353 MULTI CID FTMS 0 0 0 18848 172051.75 0.8859551880777031 -5 0.2521820068359375 4 Oxidation (M) _MECDACGM(Oxidation (M))QPA_ CON__ENSEMBL:ENSBTAP00000006074 8.155526934196011 0.8366696279279818 4 [YN]C(Carbamidomethyl (C)) 3 -1 20.915 0.0 0.0 1.787 0.0 0.0 0.0 730.2348513773242 730.2348513773242 1.4511996594528398 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [YN]C(Carbamidomethyl (C)) 1.787 - 35 + 1 1.556 87980.2 1.0 13682 5168 18848 HBL1_DMSO_200M_050219_2,18852 HBL1_DMSO_200M_050219_2,18852,MECDACGMQPA False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 18853 101.73 400.0 345000.0 25 0 78141.0 + 10139 FPWPKVLKI 9 104 376.5708211178986 1126.690633953896 3 376.5707885622978 MULTI CID FTMS 0 0 0 18848 161450.15625 0.5796109394503259 8 -0.2979888916015625 5 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 57.72198328787511 0.0273433238377839 4 {M(Oxidation (M))|F}PWPKV{I|L}K{I|L} 9 0 + 51.553 0.0 0.0 4.5756 4.5756 72.642 0.0 0.0 0.0 8.170284965696588 3.4678748622465605 3.4678748622465605 3.4678748622465605 0 0.5774509799928715 0.0 0.0 0.6549471895720985 + + {M(Oxidation (M))|F}PWPKV{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}{I|L}K 4.5756;4.2678 +;- + 454 + 1 1.556 117074.1 1.0 13683 5168 18848 HBL1_DMSO_200M_050219_2,18853 HBL1_DMSO_200M_050219_2,18853,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18854 101.75 800.0 103850.0 25 0 3835.9 -1 0 118 1188.2167708592256 3561.6284831778767 3 1189.212939441204 MULTI CID FTMS 0 0 0 18848 99788.75 0.2922578807596925 -6 0.2849197387695312 6 4 {M(Oxidation (M))|F}ANQQA 6 -1 25.979 0.0 0.0 0.72942 0.0 0.0 2322.103335683345 577.201618001457 2899.304953684802 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 {M(Oxidation (M))|F}ANQQA 0.72942 - 571 + 1 1.556 56915.0 0.5699999928474426 13684 5168 18848 HBL1_DMSO_200M_050219_2,18854 HBL1_DMSO_200M_050219_2,18854, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18855 101.76 800.0 251070.0 25 0 29986.0 + + 42538 TVIKDLLGL 9 161 486.3106182786498 970.6066836240996 2 486.3105346560478 MULTI CID FTMS 0 0 0 18848 109379.3515625 0.6364705384962982 -1 0.0397186279296875 7 Unmodified _VTLVGSLGIL_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 74.92900055777586 0.0187778523875693 4 {[TV]|[{I|L}S]}VG{I|L}{I|L}SVA{I|L} 10 -1 + 82.449 0.0 0.0 8.4946 8.4946 89.666 0.0 0.0 0.0 6.672268755754658 16.17784209260661 6.672268755754658 6.672268755754658 0 1.274227503252014 2.0 1.5092254816411157 0.0 {[TV]|[{I|L}S]}VG{I|L}{I|L}SVA{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}SVA{I|L};{[TV]|[{I|L}S]}VG{I|L}{I|L}VSA{I|L};{[TV]|[{I|L}S]}{I|L}[VG]{I|L}SVA{I|L};{[TV]|[{I|L}S]}VG{I|L}{I|L}G{I|L}S{I|L};{[TV]|[{I|L}S]}VG{I|L}{I|L}VAS{I|L};{[TV]|[{I|L}S]}VG{I|L}S{I|L}VA{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}SVA{I|L};[VS]G{I|L}{I|L}{I|L}SVA{I|L};{[TV]|[{I|L}S]}VG{I|L}VTVA{I|L} 8.4946;7.8071;7.58;7.5768;7.5522;7.4235;7.3473;7.1995;7.0974;7.0969 -;-;-;-;-;-;-;-;-;- 4356 1 1.556 153493.7 0.9399999976158142 13685 5168 18848 HBL1_DMSO_200M_050219_2,18855 HBL1_DMSO_200M_050219_2,18855,VTLVGSLGIL False False TVIKDLLGL 101.76221 486.310534656048 1596555.5 18848.0 ENSG00000082898|ENST00000401558|XPO1;;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 2.3549057841300964 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18856 101.78 800.0 194980.0 25 0 14474.0 -1 0 131 698.1349425506107 3485.638330420053 5 698.5369750857353 MULTI CID FTMS 0 0 0 18848 97534.875 0.3142350749424309 8 -0.2979888916015625 8 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 34.412 0.0 0.0 0.98727 0.0 0.0 0.0 2445.0225826996034 2445.0225826996034 8.358069188646098 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 0.98727 - 1456 1 1.556 118922.3 0.4199999868869781 13686 5168 18848 HBL1_DMSO_200M_050219_2,18856 HBL1_DMSO_200M_050219_2,18856, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18857 101.79 800.0 240590.0 25 0 36898.0 + 34747 SPYPWPLNHI 10 121 612.3143340079008 1222.6141150826015 2 612.3146240115166 MULTI CID FTMS 0 0 0 18848 93216.546875 0.2275200076274014 63 -1.8075408935546875 9 Unmodified _SPYPWPLNHI_ ENSG00000128654|ENST00000249442|MTX2;ENST00000420864.5_1_2:177135134-177202389:+|nuORF;nc|ENSG00000128654|O75431-2|MTX2 74.92900055777586 0.0187778523875693 4 [PS]YPW{I|L}PNH{I|L} 10 2 + 64.108 0.0 0.0 5.2435 5.2435 69.899 0.0 0.0 0.0 14.673491715385907 0.5551732784983159 0.5551732784983159 0.5551732784983159 0 0.9247425010840048 1.5228787452803376 0.0 1.0994850021680094 [PS]YPW{I|L}PNH{I|L};[PS]YPW{I|L}PV[HQ];[PS]YPW{I|L}PGGH{I|L};[PS]Y{I|L}[WP]PNH{I|L};[PS]Y{I|L}[WP]PV[HQ];[PS]YP{[DA]|[EG]}{I|L}[RH][PA];[PS]Y{I|L}{[MG]|[TS]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PA];[PS]Y{I|L}[WP]PGGH{I|L} 5.2435;5.1981;3.5947;3.158;3.1126;2.9253;2.146;2.061 -;-;-;-;-;-;-;- 969 + 1 1.556 144824.8 0.4099999964237213 13687 5168 18848 HBL1_DMSO_200M_050219_2,18857 HBL1_DMSO_200M_050219_2,18857,SPYPWPLNHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18858 101.8 199.0 340390.0 25 0 58573.0 + 33499 SIIQEFPEI 9 96 538.2854636079966 1074.556374282793 2 538.2874633669853 MULTI CID FTMS 0 0 0 18848 85686.2890625 0.5330624403406826 -7 0.3606719970703125 10 Unmodified _SIIQEFPEI_ ENSG00000094841|ENST00000373383|UPRT;ENST00000373379.5_1_X:74520846-74523343:+|nuORF;ENST00000462237.5_1_X:74514443-74523343:+|nuORF 30.63653989081413 0.1413794767160703 4 [EP]EKK{M(Oxidation (M))|F}A{I|L} 8 7 27.625 0.0 0.0 2.5708 0.0 0.0 0.0 129.00312313454927 129.00312313454927 1.990152339223748 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 [EP]EKK{M(Oxidation (M))|F}A{I|L} 2.5708 - 570 1 1.556 57628.5 1.0 13688 5168 18848 HBL1_DMSO_200M_050219_2,18858 HBL1_DMSO_200M_050219_2,18858,SIIQEFPEI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18860 101.8 21.0 4999700.0 25 0 412740.0 -1 0 91 872.4171467820075 3485.63948126163 4 872.9196044802666 MULTI CID FTMS 0 0 0 18859 5022386.5 0.3004912732011728 9 -0.275146484375 1 4 {I|L}ENHG{I|L} 6 -1 39.641 0.0 0.0 1.1373 0.0 0.0 290.11224078322067 2529.1159799584066 2819.2282207416274 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {I|L}ENHG{I|L} 1.1373 - 456 + 1 1.556 83430.0 1.0 13689 5169 18859 HBL1_DMSO_200M_050219_2,18860 HBL1_DMSO_200M_050219_2,18860, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18861 101.8 49.0 2163500.0 25 0 408600.0 + 26042 NMLPQIFRV 9 83 559.3127814927312 1116.6110100522624 2 559.3132812380791 MULTI CID FTMS 0 0 0 18859 1222545.5 1.0 0 0.0 2 Unmodified _NMLPQIFRV_ ENSG00000047621|ENST00000261250|C12orf4;ENST00000544258.1_3_12:4598975-4611546:-|nuORF 61.357469665136826 0.0253304979873734 4 [MN]{I|L}PQ{I|L}{M(Oxidation (M))|F}[RV] 9 0 + 64.333 0.0 0.0 5.7614 5.7614 84.706 0.0 0.0 0.0 58.3379001364149 2.632192780232785 2.632192780232785 9.208187539523747 0 1.0 1.6989700043360187 0.0 0.75 + + [MN]{I|L}PQ{I|L}{M(Oxidation (M))|F}[RV];[MN]{I|L}P[AG]{I|L}{M(Oxidation (M))|F}[RV] 5.7614;4.9368 +;- + 61 + 1 1.556 84423.1 1.0 13690 5169 18859 HBL1_DMSO_200M_050219_2,18861 HBL1_DMSO_200M_050219_2,18861,NMLPQIFRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18862 101.8 80.0 1143400.0 25 0 184670.0 + 29746 QPPPPPLWI 9 92 522.7973750860575 1043.580197238915 2 522.7977783083916 MULTI CID FTMS 0 0 0 18859 674683.3125 0.2757269248974964 8 -0.2566299438476562 3 Unmodified _QPPPPPLWI_ ENSG00000135045|ENST00000376854|C9orf40 53.57557251787612 0.0325303259649373 4 [{I|L}P]PPP[QP]W{I|L} 9 2 + 20.881 0.0 0.0 2.0009 2.0009 65.13 0.0 0.0 0.0 2.1518225695501805 0.2018122933698443 0.2018122933698443 2.9794656189555013 0 0.6989700043360187 0.8538719643217619 0.0 0.0 [{I|L}P]PPP[QP]W{I|L};{[HG]|PP}QPP[{I|L}P]W{I|L};[{I|L}P]PPQ{[HG]|PP}W{I|L};{[HG]|PP}QP{I|L}{[HG]|PP}W{I|L};{[HG]|PP}{I|L}PP[QP]W{I|L};{[HG]|PP}{I|L}PQ{[HG]|PP}W{I|L};[{I|L}P]PP[AG]{[HG]|PP}W{I|L};[{I|L}P][YK][QP]W{I|L};{[HG]|PP}[AG]PP[{I|L}P]W{I|L};{[HG]|PP}[AG]P{I|L}{[HG]|PP}W{I|L} 2.0009;1.7154;1.4239;1.3329;1.3311;0.75416;0.54157;0.32899;0.25854;0.13882 -;-;-;-;-;-;-;-;-;- 299 1 1.556 75813.7 1.0 13691 5169 18859 HBL1_DMSO_200M_050219_2,18862 HBL1_DMSO_200M_050219_2,18862,QPPPPPLWI True True QPPPPPLWI 101.80303 522.797778308392 207691488.0 18859.0 ENSG00000135045|ENST00000376854|C9orf40 5.403544425964356 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18863 101.81 122.0 846140.0 25 0 56446.0 -1 0 88 847.1560649459955 3384.5951539175817 4 847.4075195193291 MULTI CID FTMS 0 0 0 18859 590643.1875 0.6909514613136857 4 -0.1021957397460937 4 4 [YQ]{I|L}H{I|L}E 6 -1 61.075 0.0 0.0 1.8045 0.0 0.0 0.0 2598.162346679156 2598.162346679156 23.23930897695621 0.0 0.0 0.0 0 1.0 1.154901959985743 1.110924374808178 0.0 [YQ]{I|L}H{I|L}E 1.8045 - 308 + 1 1.556 81332.3 1.0 13692 5169 18859 HBL1_DMSO_200M_050219_2,18863 HBL1_DMSO_200M_050219_2,18863, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18864 101.81 192.0 300400.0 25 0 36022.0 + 45616 YVLDINSIDNL 11 84 639.8325419359924 1277.6505309387846 2 639.8326904177666 MULTI CID FTMS 0 0 0 18859 347400.03125 0.6665981288147041 1 -0.0520553588867187 5 Unmodified _YVLDINSIDNL_ ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 66.45667989310934 0.0429411148994294 4 [YV]{I|L}D{I|L}NS 7 4 56.335 0.0 0.0 4.4093 0.0 0.0 0.0 470.2266167144284 470.2266167144284 3.062572711809324 0.0 0.0 0.0 0 0.0 2.0 0.7134679910804405 0.3494850021680094 + [YV]{I|L}D{I|L}NS 4.4093 + + 1264 1 1.556 53470.0 1.0 13693 5169 18859 HBL1_DMSO_200M_050219_2,18864 HBL1_DMSO_200M_050219_2,18864,YVLDINSIDNL True True YVLDINSIDNL 101.80928 639.832690417767 8751362.0 18859.0 ENSG00000137959|ENST00000370751|IFI44L;;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 6.21216615041097 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18865 101.82 375.0 513620.0 25 0 85722.0 + 5010 DGVLIWKI 8 117 472.2844015963332 942.5542502594664 2 472.2846252322197 MULTI CID FTMS 0 0 0 18859 293162.5 0.4063623526150274 -5 0.2981033325195312 6 Unmodified _DGVLIWKI_ ENSG00000076604|ENST00000262395|TRAF4 57.47134341890925 0.1146309765603773 4 [DG]V{I|L}{I|L}WK{I|L} 8 0 [DG]V + + 46.766 16.655 6.1433 4.9616 4.9616 52.309 0.0 0.0 0.0 0.0 22.82120227101629 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.5 + + [DG]V{I|L}{I|L}WK{I|L} 4.9616 + + 400 + 1 1.556 147274.8 1.0 13694 5169 18859 HBL1_DMSO_200M_050219_2,18865 HBL1_DMSO_200M_050219_2,18865,DGVLIWKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18866 101.82 243.0 509940.0 25 0 49853.0 + 17336 KLVNILVQL 9 110 520.3471069834617 1038.6796610337233 2 520.3475829958916 MULTI CID FTMS 0 0 0 18859 286523.96875 1.0 0 0.0 7 Unmodified _KLVNILVQL_ ENSG00000115760|ENST00000421745|BIRC6 81.61307344734483 0.0171259190214613 4 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}K{I|L}VQ{I|L} 9 3 + 83.502 0.0 0.0 8.0392 8.0392 81.891 0.0 0.0 0.0 1.9171776986915745 16.478174818886373 1.9171776986915745 1.9171776986915745 0 1.0044321917401078 0.744727494896694 0.0 1.7416440611282624 {[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}K{I|L}VQ{I|L};[VG]AVK{I|L}{I|L}VQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VK{I|L}{I|L}VQ{I|L};[VG]AV{I|L}K{I|L}VQ{I|L};[{I|L}A]GVVK{I|L}VQ{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VK{I|L}VQ{I|L};[{I|L}V]N{I|L}K{I|L}VQ{I|L};[Q{I|L}]VVK{I|L}VQ{I|L};[VG]A{I|L}VK{I|L}VQ{I|L};[{I|L}V]NK{I|L}{I|L}VQ{I|L} 8.0392;7.8546;7.8342;7.808;7.7951;7.7494;7.6872;7.5769;7.5182;7.4821 -;-;-;-;-;-;-;-;-;- 1889 1 1.556 97667.3 1.0 13695 5169 18859 HBL1_DMSO_200M_050219_2,18866 HBL1_DMSO_200M_050219_2,18866,KLVNILVQL True True KLVNILVQL 101.82055 520.347582995892 2092775.875 18859.0 ENSG00000115760|ENST00000421745|BIRC6 3.358686844507853 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18867 101.83 769.0 245110.0 25 0 31825.0 + 35890 SVLVKLLEV 9 163 500.3261793326338 998.6378057320676 2 500.3262817263603 MULTI CID FTMS 0 0 0 18859 102314.2578125 0.9014566989864362 -3 0.1920013427734375 8 Unmodified _SVLVKLLEV_ ENSG00000126107|ENST00000372172|HECTD3;nc|ENSG00000126107|Q5T447-2|HECTD3 63.960520009940105 0.0238892913700936 4 [VS]{I|L}V[K{I|L}]{I|L}D{I|L} 9 2 + 49.344 0.0 0.0 4.9411 4.9411 67.821 0.0 0.0 0.0 3.656199575899634 8.255109790982864 3.656199575899634 0.2634368713184543 0 2.024227503252014 2.0 0.25 0.0 [VS]{I|L}V[K{I|L}]{I|L}D{I|L};[VS]{I|L}V[{I|L}A]{I|L}VSV;[VS]{I|L}[{I|L}A]V{I|L}VSV;[{I|L}V]K{I|L}E{I|L}VSV;[{I|L}V]K{I|L}{I|L}EVSV;[{I|L}V]SV[K{I|L}]{I|L}D{I|L};[{I|L}V]SV[{I|L}A]{I|L}VSV;{[QN]|[E{I|L}]|[KN]}{I|L}KV{I|L}VSV;[{I|L}V]S[{I|L}A]V{I|L}VSV;{I|L}{I|L}KVE{I|L}VSV 4.9411;4.9147;4.6362;3.3295;3.2167;2.9613;2.9349;2.7847;2.6564;2.5377 -;-;-;-;-;-;-;-;-;- 6824 1 1.556 145401.6 1.0 13696 5169 18859 HBL1_DMSO_200M_050219_2,18867 HBL1_DMSO_200M_050219_2,18867,SVLVKLLEV True True SVLVKLLEV 101.83384 500.32628172636 896557.0 18859.0 ENSG00000126107|ENST00000372172|HECTD3;;nc|ENSG00000126107|Q5T447-2|HECTD3 5.166155815124512 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18868 101.85 766.0 194750.0 25 0 20385.0 + 34552 SPDPFPVPIL 10 137 541.3001610348749 1080.5857691365495 2 541.3010131716728 MULTI CID FTMS 0 0 0 18859 97076.7890625 0.8779317519840464 -3 0.1920013427734375 9 Unmodified _SPDPFPVPIL_ ENST00000525974.5_1_16:66583481-66583592:-|nuORF;ENST00000527800.5_1_16:66583301-66583592:-|nuORF 32.30548876998284 0.2428506522065767 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]VPVP{I|L}{I|L} 10 3 + 42.127 0.0 0.0 3.8985 3.8985 69.32 0.0 0.0 0.0 4.014005407815439 15.145680359949552 4.014005407815439 3.0102999566398125 0 1.048455006504028 0.0 0.6747425010840047 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]VPVP{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]PVVP{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[WD]PVP{I|L}{I|L};{[DA]|[EG]}Y{[HG]|PP}PVP{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]VP[{I|L}P]V{I|L};[DP][MT]VPVP{I|L}{I|L};{[DA]|[EG]}Y[YK]VP{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS]PV[{I|L}P]V{I|L};{[QN]|[E{I|L}]|[KN]}[WD]P[{I|L}P]V{I|L};[KP]DA[DN]VP{I|L}{I|L} 3.8985;3.6199;3.527;3.0638;2.7193;2.5452;2.4593;2.4407;2.3478;2.3177 -;-;-;-;-;-;-;-;-;- 956 1 1.556 129207.0 1.0 13697 5169 18859 HBL1_DMSO_200M_050219_2,18868 HBL1_DMSO_200M_050219_2,18868,SPDPFPVPIL False True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18870 101.85 133.0 692110.0 25 0 120560.0 + 9796 FPANVMDVI 9 82 503.2573629066841 1004.5001728801682 2 503.2576171755791 MULTI CID FTMS 0 0 0 18869 456717.28125 0.7387668907220993 1 -0.0237350463867187 1 Unmodified _FPANVMDVI_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF 70.71552829651908 0.0208223590022201 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANVMDV{I|L} 9 0 + 65.115 0.0 0.0 6.4823 6.4823 90.837 0.0 0.0 0.0 17.859883374474883 10.330145895351848 10.330145895351848 17.859883374474883 0 0.8182503180159344 1.3010299956639813 0.3252574989159953 1.610924374808178 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANVMDV{I|L};{[QG]|[NA]}P{M(Oxidation (M))|F}VMDV{I|L};[PA]N{M(Oxidation (M))|F}VMDV{I|L};{[QG]|[NA]}PV{M(Oxidation (M))|F}MDV{I|L};[PA]NV{M(Oxidation (M))|F}MDV{I|L};[DV][WK]MDV{I|L};[PA]{M(Oxidation (M))|F}NVMDV{I|L};{[NV]|[RG]}AP{M(Oxidation (M))|F}MDV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AGGVMDV{I|L};{[QG]|[NA]}VP{M(Oxidation (M))|F}MDV{I|L} 6.4823;4.7043;4.6425;4.625;4.5631;4.1767;4.1675;4.0602;3.9619;3.726 +;-;-;-;-;-;-;-;-;- + 436 1 1.556 75618.4 1.0 13698 5170 18869 HBL1_DMSO_200M_050219_2,18870 HBL1_DMSO_200M_050219_2,18870,FPANVMDVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18871 101.86 255.0 461100.0 25 0 85661.0 + 39066 TVVNFLIRV 9 97 530.8293728803433 1059.6441928274864 2 530.8296996951103 MULTI CID FTMS 0 0 0 18869 239270.0 0.5359011510202933 2 -0.0383377075195312 2 Unmodified _TVVNFLIRV_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 61.357469665136826 0.0253304979873734 4 {[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}{I|L}[RV] 9 0 + 75.864 0.0 0.0 7.1594 7.1594 87.09 0.0 0.0 0.0 14.417629994555128 6.989700043360188 6.989700043360188 6.989700043360188 0 0.8494850021680094 2.0 0.0 0.8494850021680094 + + {[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}{I|L}[RV];{[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}{I|L}[RV]{I|L};{[TV]|[{I|L}S]}VGG{M(Oxidation (M))|F}{I|L}{I|L}[RV];{[TV]|[{I|L}S]}VN{M(Oxidation (M))|F}VR{I|L}{I|L};{[TV]|[{I|L}S]}VGG{M(Oxidation (M))|F}{I|L}[RV]{I|L};{[TV]|[{I|L}S]}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[RV];{[TV]|[{I|L}S]}VGG{M(Oxidation (M))|F}VR{I|L}{I|L};{[TV]|[{I|L}S]}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]{I|L};EAVV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[RV];EAVV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]{I|L} 7.1594;6.4997;6.2904;6.1692;5.6307;5.5077;5.3002;4.8481;4.8217;4.162 +;-;-;-;-;-;-;-;-;- + 525 + 1 1.556 96031.6 1.0 13699 5170 18869 HBL1_DMSO_200M_050219_2,18871 HBL1_DMSO_200M_050219_2,18871,TVVNFLIRV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18872 101.87 800.0 126390.0 25 0 24154.0 -1 0 88 1159.8176729063323 3476.431189319198 3 1160.153979480267 MULTI CID FTMS 0 0 0 18869 141527.140625 0.7021915244619062 -4 0.2440567016601562 3 4 YC(Carbamidomethyl (C))G 3 -1 11.682 0.0 0.0 0.33605 0.0 0.0 1619.5853540617472 1473.7066134088502 3093.291967470597 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YC(Carbamidomethyl (C))G 0.33605 - 35 + 1 1.556 84374.4 0.5799999833106995 13700 5170 18869 HBL1_DMSO_200M_050219_2,18872 HBL1_DMSO_200M_050219_2,18872, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18874 101.88 13.0 7042000.0 25 0 916360.0 + 25620 NFPEHIFPAL 10 84 592.8085179881461 1183.6024830430922 2 592.8090087771416 MULTI CID FTMS 0 0 0 18873 4265868.5 0.6918460045391427 4 -0.0721664428710937 1 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 47.7319792270244 0.0934623409360514 4 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}N{M(Oxidation (M))|F} 7 7 49.569 0.0 0.0 4.188 0.0 0.0 0.0 296.1628363740312 296.1628363740312 29.106829096975275 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.7302046884880937 {[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}N{M(Oxidation (M))|F} 4.188 - 627 1 1.556 75643.3 1.0 13701 5171 18873 HBL1_DMSO_200M_050219_2,18874 HBL1_DMSO_200M_050219_2,18874,NFPEHIFPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18875 101.89 564.0 1213100.0 25 0 59407.0 -1 0 215 1162.887404097417 3485.640382892452 3 1163.222460925579 MULTI CID FTMS 0 0 0 18873 554865.5625 0.2025529174504565 11 -0.3570938110351562 2 4 H{I|L}VEA{I|L}Y{I|L}V 9 -1 104.91 0.0 0.0 3.0099 0.0 0.0 0.0 2445.0285367205856 2445.0285367205856 34.07854047486772 0.0 0.0 0.0 0 3.805462187404089 0.0 0.3494850021680094 0.0 H{I|L}VEA{I|L}Y{I|L}V 3.0099 - 30913 + 1 1.556 401451.1 1.0 13702 5171 18873 HBL1_DMSO_200M_050219_2,18875 HBL1_DMSO_200M_050219_2,18875, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18877 101.9 456.0 240210.0 25 0 13235.0 + 10145 FPWPKVLKI 9 119 564.3526484918425 1126.690744050485 2 564.3528930544853 MULTI CID FTMS 0 0 0 18876 163963.203125 0.7424326649727535 13 -0.448883056640625 1 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 59.36838082759317 0.0264317782606298 4 {I|L}MWPKV{I|L}K{I|L} 9 2 + 78.841 0.0 0.0 6.9976 6.9976 92.353 0.0 0.0 0.0 40.28690615201958 17.40469160072 17.40469160072 15.228787452803388 0 2.079689690656103 2.0 0.0 0.2215141619232908 {I|L}MWPKV{I|L}K{I|L};{M(Oxidation (M))|F}PWPKV{I|L}K{I|L};[KP]VW{I|L}M{I|L}K{I|L};[KP]V{I|L}WM{I|L}K{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}M{I|L}K{I|L};[KP]VW{I|L}KP{M(Oxidation (M))|F}{I|L};[KP]V{I|L}KWP{M(Oxidation (M))|F}{I|L};[KP]V{I|L}WKP{M(Oxidation (M))|F}{I|L};[KP]{I|L}VWM{I|L}K{I|L};[K{I|L}]VPWM{I|L}K{I|L} 6.9976;5.6459;4.1242;4.0812;3.8523;3.7247;3.6817;3.6817;3.6578;3.5983 -;+;-;-;-;-;-;-;-;- + 1173 + 1 1.56 91008.1 1.0 13703 5172 18876 HBL1_DMSO_200M_050219_2,18877 HBL1_DMSO_200M_050219_2,18877,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18880 101.92 800.0 365120.0 25 0 110900.0 + 29748 QPPPPPLWI 9 125 1044.5889157067309 1043.581639240131 1 1044.586962878704 MULTI CID FTMS 0 0 0 18879 200566.640625 0.2397559672339778 13 -0.5189132690429688 1 Unmodified _QPPPPPLWI_ ENSG00000135045|ENST00000376854|C9orf40 98.80718514221952 0.0113971232682052 4 QPPPP 5 4 58.231 0.0 0.0 5.58 0.0 0.0 0.0 524.2883394830686 524.2883394830686 26.910232314160464 0.0 0.0 0.0 0 1.110924374808178 1.154901959985743 0.0 0.0 + QPPPP 5.58 + + 1798 + 1 1.56 188295.0 0.8899999856948853 13704 5174 18879 HBL1_DMSO_200M_050219_2,18880 HBL1_DMSO_200M_050219_2,18880,QPPPPPLWI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18881 101.92 221.0 377290.0 25 0 32019.0 + 13560 HPFSFTPLI 9 92 529.787115258078 1057.5596775829558 2 529.7875854372978 MULTI CID FTMS 0 0 0 18879 156787.953125 0.3604145214766119 -6 0.2035675048828125 2 Unmodified _HPFSFTPLI_ ENSG00000086200|ENST00000325324|IPO11;ENST00000507640.1_1_5:61778930-61779155:+|nuORF;nc|ENSG00000086200|Q9UI26-2|IPO11 63.562846038646086 0.0241094678104353 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HS{M(Oxidation (M))|F}TP{I|L}{I|L} 9 2 + 59.461 0.0 0.0 5.6225 5.6225 74.303 0.0 0.0 0.0 2.0358917912929897 19.436974992327123 2.0358917912929897 2.0358917912929897 0 1.1237125054200234 0.8860566476931632 1.7302046884880935 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HS{M(Oxidation (M))|F}TP{I|L}{I|L};{[TV]|[{I|L}S]}[HM]{M(Oxidation (M))|F}TP{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TP{I|L}{I|L} 5.6225;5.43;3.4479 -;-;- 442 1 1.56 77519.6 1.0 13705 5174 18879 HBL1_DMSO_200M_050219_2,18881 HBL1_DMSO_200M_050219_2,18881,HPFSFTPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18882 101.93 424.0 114050.0 25 0 5952.1 + -1 FATLVDVVV 9 87 962.556637328132 0 962.552783191204 PEAK CID FTMS 0 0 0 18879 102794.2578125 1.0 0 0.0 3 nc|ENSG00000090861|P49588-2|AARS1;ENSG00000090861|ENST00000261772|AARS1 4 VVD{M(Oxidation (M))|F} 4 -1 30.918 0.0 0.0 1.6077 0.0 0.0 1078.626506002164 381.21543298892817 1459.841938991092 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 VVD{M(Oxidation (M))|F} 1.6077 - 391 + 1 1.56 38653.8 1.0 13706 5174 18879 HBL1_DMSO_200M_050219_2,18882 HBL1_DMSO_200M_050219_2,18882, False False FATLVDVVV 101.92929 962.552783191204 902876.4375 18879.0 nc|ENSG00000090861|P49588-2|AARS1;;ENSG00000090861|ENST00000261772|AARS1 4.990963300069173 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18883 101.94 800.0 216830.0 25 0 24109.0 + 23875 LVLDALMRV 9 145 515.3102304303255 1028.605907927451 2 515.3099853396416 MULTI CID FTMS 0 0 0 18879 91440.6171875 1.0 0 0.0 4 Unmodified _LVLDALMRV_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 39.94969957227396 0.0757326808254658 4 {I|L}V{I|L}DA{I|L}MRV 9 0 + 79.746 0.0 0.0 7.7529 7.7529 81.719 0.0 0.0 0.0 34.97302484056646 10.579432706033344 10.579432706033344 2.129843661361406 0 0.6861818737241735 2.0 0.0 0.6109243748081782 + + {I|L}V{I|L}DA{I|L}MRV;{I|L}VVEA{I|L}MRV;{I|L}V{I|L}W{I|L}MRV;{I|L}V{I|L}DA{I|L}[VS]S{I|L};{I|L}V{I|L}DAV{[WT]|[RM]}{I|L};{I|L}V{I|L}V{[CP]|[EA]}MRV;{I|L}VVEA{I|L}[VS]S{I|L};{I|L}VVEAV{[WT]|[RM]}{I|L};{I|L}V{I|L}VDA{[WT]|[RM]}{I|L};{I|L}VV{I|L}{[CP]|[EA]}MRV 7.7529;7.5458;7.1231;6.7243;6.6318;6.5401;6.5173;6.4247;6.364;6.3331 +;-;-;-;-;-;-;-;-;- + 1611 + 1 1.56 136103.2 0.4799999892711639 13707 5174 18879 HBL1_DMSO_200M_050219_2,18883 HBL1_DMSO_200M_050219_2,18883,LVLDALMRV True True LVLDALMRV 101.94312 515.309985339642 1364264.25 18879.0 nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;;ENSG00000100991|ENST00000252015|TRPC4AP;;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP 4.829445838928223 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18885 101.95 18.0 5919600.0 25 0 797660.0 + 11937 GMPDFLEKL 9 83 525.270178086245 1048.52580323929 2 525.2708007693291 MULTI CID FTMS 0 0 0 18884 3182171.0 0.6921618083811026 -3 0.0575637817382812 1 Unmodified _GMPDFLEKL_ ENSG00000084090|ENST00000337288|STARD7 53.832793166522166 0.0319663582346103 4 {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L} 9 0 + 56.693 0.0 0.0 5.4069 5.4069 86.144 0.0 0.0 0.0 -6.231340115610124 12.875240784723374 -6.231340115610124 15.42796583575644 0 0.3807196863200844 0.0 0.3807196863200844 1.048455006504028 + + {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L};{[MG]|[TS]}{I|L}[MD]{I|L}EK{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F}{[ET]|[MV]}[WP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F}[QT]{[{M(Oxidation (M))|F}H]|[RQ]};{[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}{[ET]|[MV]}[WP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EK{[ET]|[MV]}[WP] 5.4069;3.9355;0.61881;0.33171;0.087765;0.044125 +;-;-;-;-;- + 371 + 1 1.56 87382.9 1.0 13708 5175 18884 HBL1_DMSO_200M_050219_2,18885 HBL1_DMSO_200M_050219_2,18885,GMPDFLEKL True True GMPDFLEKL 101.94782 525.270800769329 209098960.0 18884.0 ENSG00000084090|ENST00000337288|STARD7 7.113331317901611 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18886 101.96 800.0 183350.0 25 0 27671.0 + 14036 IAIPAMVI 8 119 827.5062016895079 826.4989252229078 1 827.5074340701103 MULTI CID FTMS 0 0 0 18884 109647.953125 1.0 0 0.0 2 Unmodified _IAIPAMVI_ ENSG00000116514|ENST00000235150|RNF19B;nc|ENSG00000116514|Q6ZMZ0-2|RNF19B;nc|ENSG00000116514|Q6ZMZ0-3|RNF19B;nc|ENSG00000116514|Q6ZMZ0|RNF19B 52.33426049586781 0.1282678332820461 4 [PA]MV{I|L}A{I|L}{I|L} 8 6 + 56.375 0.0 0.0 6.821 6.821 80.34 0.0 0.0 0.0 11.92616153745984 16.40978057358332 11.92616153745984 2.9659780392387347 0 0.0 1.0 0.0 0.0 [PA]MV{I|L}A{I|L}{I|L};[PA]M{I|L}A{I|L}V{I|L};[PA]M{I|L}AV{I|L}{I|L};[PA]MVA{I|L}{I|L}{I|L};[PA]M{I|L}VA{I|L}{I|L};[PA]{I|L}A{I|L}MV{I|L};[PA]{I|L}AM{I|L}V{I|L};[PA]{I|L}MA{I|L}V{I|L};[PA]{I|L}AMV{I|L}{I|L};[PA]{I|L}MAV{I|L}{I|L} 6.821;6.4621;6.4567;6.4567;6.2437;6.0946;5.8848;5.8848;5.8795;5.8795 -;-;-;-;-;-;-;-;-;- 1249 1 1.56 104157.6 0.4099999964237213 13709 5175 18884 HBL1_DMSO_200M_050219_2,18886 HBL1_DMSO_200M_050219_2,18886,IAIPAMVI False True IAIPAMVI 101.96168 827.50743407011 823740.375 18884.0 nc|ENSG00000116514|Q6ZMZ0|RNF19B;;nc|ENSG00000116514|Q6ZMZ0-3|RNF19B;;nc|ENSG00000116514|Q6ZMZ0-2|RNF19B;;ENSG00000116514|ENST00000235150|RNF19B 4.296312729517619 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18887 101.97 399.0 300530.0 25 0 140710.0 18706 LAIWEASL 8 81 902.4972560042972 901.4899795376972 1 902.4990112185478 MULTI CID FTMS 0 0 0 18884 134336.734375 0.6613581149678588 46 -1.4611587524414062 3 Unmodified _LAIWEASL_ ENSG00000155906|ENST00000444024|RMND1;nc|ENSG00000155906|Q9NWS8-2|RMND1 23.1484247019978 0.5573009939494978 4 {M(Oxidation (M))|F}A{I|L}AS{I|L} 6 3 43.448 0.0 0.0 4.8196 0.0 0.0 281.17402846504064 0.0 281.17402846504064 0.0 37.96388461952553 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F}A{I|L}AS{I|L} 4.8196 - 73 1 1.56 83359.3 1.0 13710 5175 18884 HBL1_DMSO_200M_050219_2,18887 HBL1_DMSO_200M_050219_2,18887,LAIWEASL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18888 101.98 744.0 273640.0 25 0 61001.0 + 3985 DALRLYLI 8 127 488.7951028032055 975.575652673211 2 488.7951843142509 MULTI CID FTMS 0 0 0 18884 126056.9296875 0.2821894524897954 -5 0.0959014892578125 4 Unmodified _DALRLYLI_ ENSG00000196305|ENST00000443024|IARS1 85.27202061508552 0.0687763219216887 4 {[DA]|[EG]}{I|L}R{I|L}Y{I|L}{I|L} 8 0 + 81.479 0.0 0.0 8.3519 8.3519 94.265 0.0 0.0 0.0 21.544471223961928 14.904630595263429 14.904630595263429 11.66969318954402 0 1.774227503252014 1.5228787452803376 0.5451140161145328 0.9392404878284264 + + {[DA]|[EG]}{I|L}R{I|L}Y{I|L}{I|L};{[DA]|[EG]}{I|L}RY{I|L}{I|L}{I|L};[{I|L}A]DR{I|L}Y{I|L}{I|L};[{I|L}A]RD{I|L}Y{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GR{I|L}Y{I|L}{I|L};{[VA]|[{I|L}G]}ER{I|L}Y{I|L}{I|L};[{I|L}A]DRY{I|L}{I|L}{I|L};[{I|L}A]R{I|L}DY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}G[VG]{I|L}Y{I|L}{I|L};[Y{I|L}][R{I|L}]AD{I|L}{I|L} 8.3519;7.1557;6.1435;5.7768;5.5579;5.4298;4.9473;4.6498;4.6085;4.5827 +;-;-;-;-;-;-;-;-;- + 504 1 1.56 154699.5 1.0 13711 5175 18884 HBL1_DMSO_200M_050219_2,18888 HBL1_DMSO_200M_050219_2,18888,DALRLYLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18889 102.0 800.0 112320.0 25 0 16368.0 + 34560 SPFGQIMEI 9 116 511.2544050149882 1020.4942570967764 2 511.2550842165947 MULTI CID FTMS 0 0 0 18884 84880.9453125 0.5928239820227151 6 -0.262939453125 5 Unmodified _SPFGQIMEI_ ENSG00000116001|ENST00000433529|TIA1;ENSG00000151923|ENST00000436547|TIAL1;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1;nc|ENSG00000151923|Q01085-2|TIAL1 56.17704186161178 0.0281986971544335 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GQS{I|L}ME{I|L} 9 2 + 51.929 0.0 0.0 5.0886 5.0886 69.179 0.0 0.0 0.0 5.7744657025087065 8.824995917031941 5.7744657025087065 0.5495374279561105 0 0.5924778212679485 1.3010299956639813 1.110924374808178 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GQS{I|L}ME{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SGQ{I|L}ME{I|L};[VS]{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L}ME{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSQ{I|L}ME{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GQ{I|L}SME{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[AG]S{I|L}ME{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SG[AG]{I|L}ME{I|L};[PS]{M(Oxidation (M))|F}GQ{I|L}ME{I|L};{[TV]|[{I|L}S]}MGQ{I|L}ME{I|L};[VS]{[DS]|[MA]|[CV]|TT}Q{I|L}ME{I|L} 5.0886;5.0347;4.5227;4.326;4.2786;4.1862;4.1324;4.094;3.9772;3.7602 -;-;-;-;-;-;-;+;-;- + 934 1 1.56 72533.8 0.7900000214576721 13712 5175 18884 HBL1_DMSO_200M_050219_2,18889 HBL1_DMSO_200M_050219_2,18889,SPFGQIMEI True True SPFGQIMEI 101.99556 511.255084216595 2970186.0 18884.0 nc|ENSG00000151923|Q01085-2|TIAL1;;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;;ENSG00000151923|ENST00000436547|TIAL1;;nc|ENSG00000116001|P31483-2|TIA1;;ENSG00000116001|ENST00000433529|TIA1;;ENST00000482876.5_1_2:70442329-70444102:-|nuORF 3.1393264134724936 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18891 102.01 742.0 271070.0 25 0 8527.6 -1 0 159 1188.2167708592256 3561.6284831778767 3 1188.886645495892 MULTI CID FTMS 0 0 0 18890 305327.25 0.6632321454245098 3 -0.1451339721679687 1 4 [Y{M(Oxidation (M))|F}]N[Q{I|L}]RQDA[Y{M(Oxidation (M))|F}]KMN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 29 -1 [Y{M(Oxidation (M))|F}]N[Q{I|L}]RQDA[Y{M(Oxidation (M))|F}]K + + 98.502 16.137 1.0254 2.7656 2.7656 45.501 0.0 0.0 0.0 0.0 61.58539888625626 0.0 0.0 0 1.8807196863200843 0.0 0.0 1.873712505420024 [Y{M(Oxidation (M))|F}]N[Q{I|L}]RQDA[Y{M(Oxidation (M))|F}]KMN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.7656 - 14353 + 1 1.56 129258.0 1.0 13713 5176 18890 HBL1_DMSO_200M_050219_2,18891 HBL1_DMSO_200M_050219_2,18891, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18892 102.02 411.0 362780.0 25 0 25002.0 + 26708 NYPAFMMEM 9 140 567.2262983389617 1132.4380437447232 2 567.2271606326103 MULTI CID FTMS 0 0 0 18890 186109.140625 0.4627505357710771 7 -0.2618026733398437 2 Unmodified _NYPAFMMEM_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 100.37149154755038 0.0107586824602606 4 [YN]PA{M(Oxidation (M))|F}MM{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 0 + 49.685 0.0 0.0 4.3874 4.3874 67.695 0.0 0.0 0.0 1.249387366082999 1.249387366082999 1.249387366082999 1.249387366082999 0 0.8737125054200234 1.6989700043360187 0.0 2.018930178484529 + + [YN]PA{M(Oxidation (M))|F}MM{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YD]|[{M(Oxidation (M))|F}M]}MM{M(Oxidation (M))|F}APQM;[YN]P[WY]M{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YD]|[{M(Oxidation (M))|F}M]}M[WY]PQM;[YN]P[WM]Y{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YD]|[{M(Oxidation (M))|F}M]}MM[WK]EM;{[YD]|[{M(Oxidation (M))|F}M]}Y[WM]PQM;{[MS]|[{M(Oxidation (M))|F}A]}PNYMM{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[PA][YN]{M(Oxidation (M))|F}MM{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KG]{M(Oxidation (M))|F}MM{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.3874;4.2771;2.8226;2.7123;2.1412;2.1014;2.0309;2.0025;1.8917;1.7262 +;-;-;-;-;-;-;-;-;- + 1521 1 1.56 114993.5 1.0 13714 5176 18890 HBL1_DMSO_200M_050219_2,18892 HBL1_DMSO_200M_050219_2,18892,NYPAFMMEM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18893 102.03 403.0 228080.0 25 0 41135.0 + -1 VECSLCYI 8 87 493.7204419171403 985.4263309010806 2 493.7204162478447 MULTI CID FTMS 0 0 0 18890 144472.046875 1.0 0 0.0 3 Carbamidomethyl (C) _VEC(Carbamidomethyl (C))SLCYI_ REV__ENSG00000138100|ENST00000380075|TRIM54;REV__nc|ENSG00000138100|Q9BYV2-2|TRIM54 9.347437153973935 0.7675937258251505 4 VE 2 -1 25.217 0.0 0.0 2.5589 0.0 0.0 0.0 754.2930202179082 754.2930202179082 9.503187623076954 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 VE 2.5589 + + 34 + 1 1.56 75784.7 1.0 13715 5176 18890 HBL1_DMSO_200M_050219_2,18893 HBL1_DMSO_200M_050219_2,18893,VECSLCYI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18894 102.03 511.0 189310.0 25 0 22922.0 -1 MECDACGMQPA 11 97 586.2002600339696 1170.385967134739 2 586.2008544802666 MULTI CID FTMS 0 0 0 18890 137695.625 0.7090433741264002 3 -0.1451339721679687 4 Oxidation (M) _MECDACGM(Oxidation (M))QPA_ CON__ENSEMBL:ENSBTAP00000006074 8.155526934196011 0.8366696279279818 4 [YN]C(Carbamidomethyl (C))MNPME 8 -1 24.447 0.0 0.0 2.0888 0.0 0.0 0.0 128.01687411715594 128.01687411715594 13.9625938194564 0.0 0.0 0.0 0 0.9731975075880328 1.5228787452803376 0.0 1.1861818737241734 [YN]C(Carbamidomethyl (C))MNPME 2.0888 - 77 1 1.56 76938.8 1.0 13716 5176 18890 HBL1_DMSO_200M_050219_2,18894 HBL1_DMSO_200M_050219_2,18894,MECDACGMQPA False False False False contaminant PXD020620_cell_line HBL1_DMSO_200M_050219_2 18895 102.05 695.0 275500.0 25 0 21618.0 + 23562 LTLVEQLTV 9 143 508.3055050708798 1014.5964572085596 2 508.3049804568291 MULTI CID FTMS 0 0 0 18890 118165.171875 0.4789318814218225 -4 0.1100616455078125 5 Unmodified _LTLVEQLTV_ REV__ENSG00000188352|ENST00000338382|FOCAD 49.55428908609986 0.0413471690215031 4 [{I|L}T]QEV{I|L}VT{I|L} 9 -1 + 66.608 0.0 0.0 6.565 6.565 80.364 0.0 0.0 0.0 3.204642090149875 6.324995917031941 3.204642090149875 3.204642090149875 0 0.4489700043360188 1.6989700043360187 1.3807196863200843 0.5 [{I|L}T]QEV{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}N{I|L}T{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}T{I|L}VT{I|L};[{I|L}T]QE{I|L}VVT{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}T{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}QTV{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}GG{I|L}T{I|L}VT{I|L};[{I|L}T][AG]EV{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}QVT{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}N{I|L}{I|L}TVT{I|L} 6.565;6.2491;5.8118;5.6804;5.598;5.5516;5.3415;5.1646;5.1009;5.0409 -;-;-;-;-;-;-;-;-;- 2742 1 1.56 144837.2 1.0 13717 5176 18890 HBL1_DMSO_200M_050219_2,18895 HBL1_DMSO_200M_050219_2,18895,LTLVEQLTV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18896 102.05 287.0 361760.0 25 0 48275.0 + 29817 QQITEVFVL 9 139 538.8051524167289 1075.5957519002577 2 538.8066894412041 MULTI CID FTMS 0 0 0 18890 97826.1875 1.0 0 0.0 6 Unmodified _QQITEVFVL_ chr10:128113602-128116491|30|12.57|0.71|4.15|-|ENST00000368653|MKI67,MKI67;ENSG00000148773|ENST00000368654|MKI67;nc|ENSG00000148773|P46013-2|MKI67 47.594388314883695 0.0456443387682827 4 {NN|[MP]|[D{I|L}]|[EV]}Q[{I|L}T]Q{M(Oxidation (M))|F}[{I|L}V] 9 4 + 46.846 0.0 0.0 4.3554 4.3554 71.845 0.0 0.0 0.0 6.289850105233292 4.762036441594191 4.762036441594191 3.4678748622465605 0 0.0 1.0457574905606752 1.2134679910804405 0.5891368308784531 {NN|[MP]|[D{I|L}]|[EV]}Q[{I|L}T]Q{M(Oxidation (M))|F}[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}[WR]Q{M(Oxidation (M))|F}[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}T[Q{I|L}]Q{M(Oxidation (M))|F}[{I|L}V];{[TV]|[{I|L}S]}E[Q{I|L}]Q{M(Oxidation (M))|F}[{I|L}V];{[QN]|[E{I|L}]|[KN]}Q{[TV]|[{I|L}S]}Q{M(Oxidation (M))|F}[{I|L}V];{[QN]|[E{I|L}]|[KN]}N[{I|L}T]Q{M(Oxidation (M))|F}[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}T[RN]V{M(Oxidation (M))|F}[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}AA{[TV]|[{I|L}S]}Q{M(Oxidation (M))|F}[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}[AG][{I|L}T]Q{M(Oxidation (M))|F}[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}Q[{I|L}T][AG]{M(Oxidation (M))|F}[{I|L}V] 4.3554;4.0329;3.9118;3.7706;3.7212;3.6471;3.6043;3.5733;3.4993;3.4993 -;-;-;-;-;-;-;-;-;- 3309 1 1.56 92607.0 1.0 13718 5176 18890 HBL1_DMSO_200M_050219_2,18896 HBL1_DMSO_200M_050219_2,18896,QQITEVFVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18898 102.06 30.0 3549200.0 25 0 260480.0 -1 0 104 872.4171467820075 3485.63948126163 4 872.6694213747978 MULTI CID FTMS 0 0 0 18897 2312779.5 0.1421450984397949 17 -0.6952056884765625 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 46.604 0.0 0.0 1.337 0.0 0.0 0.0 2445.0269303114897 2445.0269303114897 0.4060751224076853 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.337 - 226 1 1.566 83434.3 1.0 13719 5177 18897 HBL1_DMSO_200M_050219_2,18898 HBL1_DMSO_200M_050219_2,18898, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18899 102.07 800.0 182910.0 25 0 20512.0 + 1826 ALTELLAKI 9 161 486.3106182786498 970.6066836240996 2 486.3113281130791 MULTI CID FTMS 0 0 0 18897 50987.74609375 0.2966940080501228 8 -0.2826461791992187 2 Unmodified _ALTELLAKI_ ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF 41.8396318013385 0.0653578398400075 4 {[TV]|[{I|L}S]}[DV]{I|L}{I|L}AK{I|L} 9 3 + 40.033 0.0 0.0 4.1245 4.1245 68.204 0.0 0.0 0.0 2.820998171794514 12.100775082214668 2.820998171794514 2.001962355242945 0 0.9731975075880328 2.0 0.0 0.0 {[TV]|[{I|L}S]}[DV]{I|L}{I|L}AK{I|L};{[TV]|[{I|L}S]}{I|L}[DV]{I|L}AK{I|L};[{I|L}A]TE{I|L}{I|L}AK{I|L} 4.1245;3.9182;3.408 -;-;+ + 1512 + 1 1.566 112301.3 0.4000000059604645 13720 5177 18897 HBL1_DMSO_200M_050219_2,18899 HBL1_DMSO_200M_050219_2,18899,ALTELLAKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18901 102.08 96.0 1155300.0 25 0 190500.0 + 5011 DGVLIWKI 8 93 472.2844015963332 942.5542502594664 2 472.2844116091728 MULTI CID FTMS 0 0 0 18900 675687.9375 0.9365936636373876 4 -0.1577377319335937 1 Unmodified _DGVLIWKI_ ENSG00000076604|ENST00000262395|TRAF4 57.47134341890925 0.1146309765603773 4 [DG]V{I|L}{I|L} 5 3 45.15 0.0 0.0 4.7902 0.0 0.0 0.0 442.2490494140164 442.2490494140164 18.195217787905666 0.0 0.0 0.0 0 1.5 1.2218487496163564 0.3494850021680094 0.0 + [DG]V{I|L}{I|L} 4.7902 + + 180 1 1.566 89453.2 1.0 13721 5178 18900 HBL1_DMSO_200M_050219_2,18901 HBL1_DMSO_200M_050219_2,18901,DGVLIWKI True True DGVLIWKI 102.07501 472.284411609173 12515039.0 18900.0 ENSG00000076604|ENST00000262395|TRAF4 4.093069712320964 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18902 102.08 204.0 589200.0 25 0 112830.0 + 26043 NMLPQIFRV 9 90 559.3127814927312 1116.6110100522624 2 559.3129760622978 MULTI CID FTMS 0 0 0 18900 329534.3125 0.2695476875911776 9 -0.3498001098632812 2 Unmodified _NMLPQIFRV_ ENSG00000047621|ENST00000261250|C12orf4;ENST00000544258.1_3_12:4598975-4611546:-|nuORF 61.357469665136826 0.0253304979873734 4 [MN]{I|L}PQ{I|L}{M(Oxidation (M))|F}[RV] 9 0 + 64.063 0.0 0.0 5.7373 5.7373 84.604 0.0 0.0 0.0 53.09439983606076 2.3764301679958777 2.3764301679958777 9.208187539523747 0 1.0 1.6989700043360187 0.0 0.7742275032520141 + + [MN]{I|L}PQ{I|L}{M(Oxidation (M))|F}[RV];[MN]{I|L}P[AG]{I|L}{M(Oxidation (M))|F}[RV];[MN]{I|L}VRRK[NS];[MN]V{I|L}RRK[NS];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RR{I|L}YY 5.7373;4.9127;3.6457;2.3902;0.05841 +;-;-;-;- + 203 + 1 1.566 93917.2 1.0 13722 5178 18900 HBL1_DMSO_200M_050219_2,18902 HBL1_DMSO_200M_050219_2,18902,NMLPQIFRV True True NMLPQIFRV 102.0789 559.312976062298 33119454.0 18900.0 ENST00000544258.1_3_12:4598975-4611546:-|nuORF;;ENSG00000047621|ENST00000261250|C12orf4 8.161280473073324 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18903 102.08 214.0 859930.0 25 0 107240.0 35863 SVLILASY 8 78 433.2546310283608 864.4947091235216 2 433.2549011111259 MULTI CID FTMS 0 0 0 18900 325547.5 0.2416216869654007 -3 0.1271896362304687 3 Unmodified _SVLILASY_ nc|ENSG00000176510|Q8NH08|OR10AC1 9.347437153973935 0.7675937258251505 4 T 1 8 16.466 0.0 0.0 1.9047 0.0 0.0 596.3876820294937 164.0370628440551 760.4247448735488 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 T 1.9047 - 11 1 1.566 148535.8 1.0 13723 5178 18900 HBL1_DMSO_200M_050219_2,18903 HBL1_DMSO_200M_050219_2,18903,SVLILASY False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 18904 102.09 412.0 457410.0 25 0 25068.0 -1 0 136 847.1560649459955 3384.5951539175817 4 847.4079467654228 MULTI CID FTMS 0 0 0 18900 279121.78125 0.3265247220669355 13 -0.5837020874023438 4 4 [YQ]{I|L}H{I|L}EN 7 -1 67.312 0.0 0.0 1.9888 0.0 0.0 0.0 2484.120831281468 2484.120831281468 19.95522578673537 0.0 0.0 0.0 0 1.0 1.2218487496163564 0.0 1.1861818737241734 [YQ]{I|L}H{I|L}EN 1.9888 - 1353 + 1 1.566 129644.5 1.0 13724 5178 18900 HBL1_DMSO_200M_050219_2,18904 HBL1_DMSO_200M_050219_2,18904, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18905 102.1 254.0 473050.0 25 0 66103.0 + 29747 QPPPPPLWI 9 115 522.7973750860575 1043.580197238915 2 522.7978393435478 MULTI CID FTMS 0 0 0 18900 251968.53125 0.1029735092084424 17 -0.6805267333984375 5 Unmodified _QPPPPPLWI_ ENSG00000135045|ENST00000376854|C9orf40 60.38955033654506 0.025866396858536 4 [{I|L}P]PPPPQW{I|L} 9 2 + 33.611 0.0 0.0 3.2207 3.2207 76.032 0.0 0.0 0.0 8.389399919613972 2.6926645698125142 2.6926645698125142 9.208187539523756 0 0.6989700043360187 1.2218487496163564 0.0 0.0 [{I|L}P]PPPPQW{I|L};[{I|L}P]PPPP[AG]W{I|L};{[HG]|PP}{I|L}PPPQW{I|L};[QP]PPP[{I|L}P]W{I|L};[{I|L}P][YK]PQW{I|L};{[HG]|PP}QPP[{I|L}P]W{I|L};{[HG]|PP}{I|L}PPP[AG]W{I|L};[{I|L}P]P[YK]QW{I|L};[Q{I|L}]{M(Oxidation (M))|F}{I|L}PQW{I|L};[{I|L}P][YK]P[AG]W{I|L} 3.2207;2.3383;2.0499;1.8285;1.6686;1.2864;1.1675;1.0916;0.90776;0.78102 -;-;-;+;-;-;-;-;-;- + 391 1 1.566 94566.2 1.0 13725 5178 18900 HBL1_DMSO_200M_050219_2,18905 HBL1_DMSO_200M_050219_2,18905,QPPPPPLWI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18906 102.1 477.0 337200.0 25 0 36205.0 + 2455 AQVMWFEKL 9 150 576.2998993674327 1150.5852458016652 2 576.3003417849541 MULTI CID FTMS 0 0 0 18900 159091.875 0.7742083242594825 -2 0.0746917724609375 6 Unmodified _AQVMWFEKL_ ENSG00000197136|ENST00000355703|PCNX3;ENST00000439247.2_1_11:65394334-65404446:+|nuORF;nc|ENSG00000197136|Q9H6A9-3|PCNX3 57.72198328787511 0.0273433238377839 4 [QA]VMW{M(Oxidation (M))|F}EK{I|L} 9 0 [QA] + + 63.026 18.684 9.3846 5.4778 5.4778 54.58 0.0 0.0 0.0 0.0 3.1832761521297925 0.0 0.0 0 0.9247425010840048 0.0 1.5044321917401078 0.2059771852360797 + + [QA]VMW{M(Oxidation (M))|F}EK{I|L} 5.4778 + + 4367 + 1 1.566 119473.8 1.0 13726 5178 18900 HBL1_DMSO_200M_050219_2,18906 HBL1_DMSO_200M_050219_2,18906,AQVMWFEKL True True AQVMWFEKL 102.10349 576.300341784954 1534700.5 18900.0 ENSG00000197136|ENST00000355703|PCNX3;;ENST00000439247.2_1_11:65394334-65404446:+|nuORF;;nc|ENSG00000197136|Q9H6A9-3|PCNX3 7.79717477162679 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18907 102.11 491.0 566560.0 25 0 49351.0 + 22663 LPYSIRVLL 9 150 537.3398561992066 1072.665159465213 2 537.3406249880791 MULTI CID FTMS 0 0 0 18900 148727.125 0.2607061534362412 -3 0.1271896362304687 7 Unmodified _LPYSIRVLL_ ENSG00000136381|ENST00000258886|IREB2;nc|ENSG00000136381|P48200-2|IREB2 89.40071534611396 0.0152361884002446 4 {I|L}PYS{I|L}RV{I|L}{I|L} 9 0 + 100.34 0.0 0.0 9.354 9.354 92.012 0.0 0.0 0.0 68.37664121444764 14.973024840566469 14.973024840566469 8.450980400142583 0 2.087180496500464 1.6989700043360187 1.0387254899964358 0.3494850021680094 + + {I|L}PYS{I|L}RV{I|L}{I|L};{I|L}PY{I|L}SRV{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}RV{I|L}{I|L};{I|L}P{I|L}YSRV{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}SRV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SRV{I|L}{I|L}{I|L};[{I|L}P]YSRV{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}RV{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SR{I|L}V{I|L}{I|L};[{I|L}P]YSR{I|L}V{I|L}{I|L} 9.354;8.5662;7.5983;7.4365;6.8105;6.6799;6.6508;6.3594;6.1727;6.1436 +;-;-;-;-;-;-;-;-;- + 2618 + 1 1.566 225117.3 1.0 13727 5178 18900 HBL1_DMSO_200M_050219_2,18907 HBL1_DMSO_200M_050219_2,18907,LPYSIRVLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18908 102.12 365.0 443570.0 25 0 50604.0 + 1576 ALLEPGGVLTI 11 135 541.8261801041816 1081.6378072751631 2 541.8265869021416 MULTI CID FTMS 0 0 0 18900 143791.21875 0.6190019342973857 -2 0.0746917724609375 8 Unmodified _ALLEPGGVLTI_ ENSG00000112159|ENST00000369393|MDN1 65.23502041540118 0.047899150100457 4 [VP]N{I|L}AE{I|L}{I|L}T{I|L} 10 8 + 48.312 0.0 0.0 4.4666 4.4666 66.386 0.0 0.0 0.0 6.5898787050636685 10.452490459521968 6.5898787050636685 0.4568744131014099 0 1.079689690656103 0.8860566476931632 0.5501648626366046 0.0 [VP]N{I|L}AE{I|L}{I|L}T{I|L};[VP]N{I|L}A{I|L}E{I|L}T{I|L};[VP]N{I|L}EA{I|L}{I|L}T{I|L};[VP]N{I|L}E{I|L}A{I|L}T{I|L};[{I|L}A]{I|L}E[NP]V{I|L}T{I|L};[VP]NE{I|L}A{I|L}{I|L}T{I|L};[{I|L}A]E{I|L}[NP]V{I|L}T{I|L};[NP]V{I|L}AE{I|L}{I|L}T{I|L};[VP]GG{I|L}AE{I|L}{I|L}T{I|L};[NP]V{I|L}A{I|L}E{I|L}T{I|L} 4.4666;4.4243;4.2615;3.9409;3.8573;3.8428;3.6522;3.6474;3.6193;3.6051 -;-;-;-;-;-;-;-;-;- 2813 1 1.566 130483.0 1.0 13728 5178 18900 HBL1_DMSO_200M_050219_2,18908 HBL1_DMSO_200M_050219_2,18908,ALLEPGGVLTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18909 102.13 461.0 392620.0 25 0 43948.0 + 17325 KLVEFDFLGA 10 146 569.8106896825203 1137.6068264318403 2 569.8102905154228 MULTI CID FTMS 0 0 0 18900 138837.125 0.2706607697209051 -3 0.1271896362304687 9 Unmodified _KLVEFDFLGA_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 38.558800761779466 0.1727858048679977 4 [{I|L}V]KE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA 10 2 + 91.636 0.0 0.0 8.0552 8.0552 87.483 0.0 0.0 0.0 13.771847870814184 6.53212513775344 6.53212513775344 5.440680443502757 0 0.9247425010840048 0.9208187539523752 1.5044321917401078 0.0 [{I|L}V]KE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA;[{I|L}V]K{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}{I|L}GA;[{I|L}V]{I|L}[SG]{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA;[{I|L}V]EK{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA;[{I|L}V]{I|L}[YQ]D{M(Oxidation (M))|F}{I|L}GA;[K{I|L}]VE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA;[{I|L}V]KE{M(Oxidation (M))|F}D{I|L}{M(Oxidation (M))|F}GA;{I|L}{I|L}V[SG]{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA;{I|L}{I|L}DK{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA;[K{I|L}]V{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}{I|L}GA 8.0552;7.5769;7.5142;7.481;6.9597;6.8446;6.7792;6.7203;6.6871;6.3663 -;-;-;-;-;+;-;-;-;- + 5839 1 1.566 137886.3 1.0 13729 5178 18900 HBL1_DMSO_200M_050219_2,18909 HBL1_DMSO_200M_050219_2,18909,KLVEFDFLGA False True KLVEFDFLGA 102.12693 569.810290515423 8189795.0 18900.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 6.845014254252116 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18910 102.14 800.0 231240.0 25 0 13503.0 + -1 IVIGSIIDV 9 116 928.5760415496412 0 928.5702392458916 PEAK CID FTMS 0 0 0 18900 136507.609375 0.7186348508603231 4 -0.1577377319335937 10 nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000157388|Q01668-2|CACNA1D;ENSG00000081248|ENST00000362061|CACNA1S;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000157388|Q01668-3|CACNA1D;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000157388|Q01668-4|CACNA1D;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C 4 VD{I|L}{I|L}VGT 7 -1 45.443 0.0 0.0 2.4495 0.0 0.0 945.5859510226638 209.1295870416625 1154.7155380643264 0.0 0.0 0.0 0.0 0 0.0 0.0 2.337180496500464 0.0 VD{I|L}{I|L}VGT 2.4495 - 3029 + 1 1.566 123211.4 0.5899999737739563 13730 5178 18900 HBL1_DMSO_200M_050219_2,18910 HBL1_DMSO_200M_050219_2,18910, False False IVIGSIIDV 102.14078 928.570239245892 1306051.25 18900.0 nc|ENSG00000151067|Q13936-13|CACNA1C;;nc|ENSG00000151067|Q13936-32|CACNA1C;;nc|ENSG00000151067|Q13936-5|CACNA1C;;nc|ENSG00000151067|Q13936-7|CACNA1C;;nc|ENSG00000157388|Q01668-2|CACNA1D;;ENSG00000081248|ENST00000362061|CACNA1S;;nc|ENSG00000151067|Q13936-37|CACNA1C;;nc|ENSG00000151067|Q13936-10|CACNA1C;;nc|ENSG00000151067|Q13936-11|CACNA1C;;nc|ENSG00000151067|Q13936-4|CACNA1C;;nc|ENSG00000151067|Q13936-9|CACNA1C;;nc|ENSG00000151067|Q13936-8|CACNA1C;;nc|ENSG00000151067|Q13936-36|CACNA1C;;ENSG00000157388|ENST00000350061|CACNA1D;;nc|ENSG00000157388|Q01668-3|CACNA1D;;nc|ENSG00000151067|Q13936-16|CACNA1C;;nc|ENSG00000151067|Q13936-34|CACNA1C;;nc|ENSG00000151067|Q13936-3|CACNA1C;;nc|ENSG00000151067|Q13936|CACNA1C;;nc|ENSG00000151067|Q13936-35|CACNA1C;;nc|ENSG00000151067|Q13936-2|CACNA1C;;nc|ENSG00000151067|Q13936-31|CACNA1C;;nc|ENSG00000151067|Q13936-17|CACNA1C;;nc|ENSG00000151067|Q13936-22|CACNA1C;;nc|ENSG00000157388|Q01668-4|CACNA1D;;nc|ENSG00000151067|Q13936-18|CACNA1C;;nc|ENSG00000151067|Q13936-21|CACNA1C 5.929218451182048 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18912 102.15 32.0 2741900.0 25 0 368460.0 + 25621 NFPEHIFPAL 10 79 592.8085179881461 1183.6024830430922 2 592.8089477419853 MULTI CID FTMS 0 0 0 18911 1658332.75 0.2689513020112807 12 -0.5132598876953125 1 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 47.7319792270244 0.0934623409360514 4 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 8 8 52.841 0.0 0.0 4.4644 0.0 0.0 0.0 126.0352724664672 126.0352724664672 31.748650278674045 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.6861818737241735 0.4247425010840047 [W{I|L}]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}S 4.4644 - 854 + 1 1.582 72933.9 1.0 13731 5179 18911 HBL1_DMSO_200M_050219_2,18912 HBL1_DMSO_200M_050219_2,18912,NFPEHIFPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18913 102.16 665.0 593070.0 25 0 30787.0 -1 0 183 1162.887404097417 3485.640382892452 3 1163.557543933392 MULTI CID FTMS 0 0 0 18911 326289.40625 0.1089764750292823 19 -0.6993408203125 2 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 71.106 0.0 0.0 2.04 0.0 0.0 0.0 2445.0272127608814 2445.0272127608814 24.78347485907939 0.0 0.0 0.0 0 2.5 0.0 0.3252574989159953 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.04 - 3892 1 1.582 240086.7 1.0 13732 5179 18911 HBL1_DMSO_200M_050219_2,18913 HBL1_DMSO_200M_050219_2,18913, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18914 102.17 796.0 336340.0 25 0 101550.0 14009 IAELEPMT 8 97 452.2284958389946 902.4424387447892 2 452.2283813357353 MULTI CID FTMS 0 0 0 18911 153997.359375 0.7332490707381734 -3 0.1451339721679687 3 Unmodified _IAELEPMT_ ENSG00000101842|ENST00000217957|VSIG1;nc|ENSG00000101842|Q86XK7-2|VSIG1 5.760428011301431 0.7893668129297577 4 {I|L} 1 7 13.099 0.0 0.0 1.4515 0.0 0.0 771.347343995569 0.0 771.347343995569 0.0 2.302046884880937 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4515 + + 23 + 1 1.582 211446.4 1.0 13733 5179 18911 HBL1_DMSO_200M_050219_2,18914 HBL1_DMSO_200M_050219_2,18914,IAELEPMT False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18916 102.18 135.0 625120.0 25 0 56007.0 + 13561 HPFSFTPLI 9 89 529.787115258078 1057.5596775829558 2 529.7872192263603 MULTI CID FTMS 0 0 0 18915 435021.1875 1.0 0 0.0 1 Unmodified _HPFSFTPLI_ ENSG00000086200|ENST00000325324|IPO11;ENST00000507640.1_1_5:61778930-61779155:+|nuORF;nc|ENSG00000086200|Q9UI26-2|IPO11 74.39630413441286 0.0193995060682538 4 {[TV]|[{I|L}S]}MH{M(Oxidation (M))|F}TP{I|L}{I|L} 9 4 + 57.826 0.0 0.0 5.4679 5.4679 71.662 0.0 0.0 0.0 0.9813624419633272 12.931825014007217 0.9813624419633272 0.9813624419633272 0 0.7742275032520141 1.3010299956639813 1.774227503252014 0.0 {[TV]|[{I|L}S]}MH{M(Oxidation (M))|F}TP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}S{M(Oxidation (M))|F}TP{I|L}{I|L};{[ET]|[MV]}TH{M(Oxidation (M))|F}TP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[TP]HP{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HP{I|L}{I|L};{[ET]|[MV]}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TP{I|L}{I|L} 5.4679;5.3751;4.0279;2.7301;2.5383;2.0631 -;+;-;-;-;- + 334 1 1.582 78308.8 1.0 13734 5180 18915 HBL1_DMSO_200M_050219_2,18916 HBL1_DMSO_200M_050219_2,18916,HPFSFTPLI True True HPFSFTPLI 102.17605 529.78721922636 6765606.0 18915.0 ENST00000507640.1_1_5:61778930-61779155:+|nuORF;;ENSG00000086200|ENST00000325324|IPO11;;nc|ENSG00000086200|Q9UI26-2|IPO11 7.313338438669841 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18917 102.18 496.0 388580.0 25 0 67842.0 + -1 ALLEPGGVLTI 11 114 1082.647951831158 0 1082.646533191204 PEAK CID FTMS 0 0 0 18915 91077.7265625 0.85823485392533 -1 0.0300979614257812 2 ENSG00000112159|ENST00000369393|MDN1 4 {I|L}T{I|L}{I|L}AE{I|L} 7 -1 42.281 0.0 0.0 1.9545 0.0 0.0 1099.649955320716 307.14206873111567 1406.7920240518315 0.0 0.0 0.0 0.0 0 0.0 0.0 1.8169015600442573 0.0 {I|L}T{I|L}{I|L}AE{I|L} 1.9545 - 2453 + 1 1.582 123409.9 1.0 13735 5180 18915 HBL1_DMSO_200M_050219_2,18917 HBL1_DMSO_200M_050219_2,18917, False False ALLEPGGVLTI 102.18484 1082.6465331912 3419197.375 18915.0 ENSG00000112159|ENST00000369393|MDN1 7.66002893447876 1.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18918 102.19 416.0 150270.0 25 0 7863.8 + 25662 NFYNFASSF 9 96 1096.470266492502 1095.4629900259022 1 1096.467456042767 MULTI CID FTMS 0 0 0 18915 98911.6875 1.0 0 0.0 3 Unmodified _NFYNFASSF_ ENSG00000149196|ENST00000278483|HIKESHI;ENST00000528004.5_1_11:86037714-86055806:+|nuORF;ENST00000530208.1_1_11:86014499-86055761:+|nuORF;ENST00000531485.5_1_11:86013462-86056677:+|nuORF 71.92227651296345 0.0203558744033348 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YN{M(Oxidation (M))|F}A[YT]G 9 3 + 66.163 0.0 0.0 6.0397 6.0397 78.874 0.0 0.0 0.0 7.3455958303115665 28.55983738459592 7.3455958303115665 3.534087492996392 0 0.9361818737241736 0.0 0.3054621874040891 1.1861818737241734 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YN{M(Oxidation (M))|F}A[YT]G;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YN{M(Oxidation (M))|F}AS{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[YN]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}A[YT]G;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YGG{M(Oxidation (M))|F}A[YT]G;[YN]{M(Oxidation (M))|F}N{M(Oxidation (M))|F}AS{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[WT]|[RM]}NH{M(Oxidation (M))|F}A[YT]G;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YNSNS{[HG]|PP}G;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YGG{M(Oxidation (M))|F}AS{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YNA{M(Oxidation (M))|F}[YT]G;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y{M(Oxidation (M))|F}NA[YT]G 6.0397;5.7171;5.3253;5.1991;5.0027;4.9103;4.9067;4.8765;4.707;4.6017 -;+;-;-;-;-;-;-;-;- + 2554 1 1.582 48600.3 1.0 13736 5180 18915 HBL1_DMSO_200M_050219_2,18918 HBL1_DMSO_200M_050219_2,18918,NFYNFASSF True True NFYNFASSF 102.19231 1096.46745604277 1254597.125 18915.0 ENST00000531485.5_1_11:86013462-86056677:+|nuORF;;ENSG00000149196|ENST00000278483|HIKESHI;;ENST00000530208.1_1_11:86014499-86055761:+|nuORF;;ENST00000528004.5_1_11:86037714-86055806:+|nuORF 7.057587305704753 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18919 102.21 800.0 159740.0 25 0 8141.3 + 10146 FPWPKVLKI 9 129 564.3526484918425 1126.690744050485 2 564.3525268435478 MULTI CID FTMS 0 0 0 18915 94742.390625 0.4289977520382037 21 -0.7396163940429688 4 Unmodified _FPWPKVLKI_ ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-2|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 61.60191391372663 0.0251951588191061 4 {I|L}MWPKV{I|L}K{I|L} 9 2 + 68.285 0.0 0.0 6.0607 6.0607 84.498 0.0 0.0 0.0 15.22878745280338 8.710024864224067 8.710024864224067 8.710024864224067 0 1.5356668758921828 2.0 0.0 0.2396518287104437 {I|L}MWPKV{I|L}K{I|L};[WP]KV{I|L}KP{M(Oxidation (M))|F}{I|L};[WP]KV{I|L}P{M(Oxidation (M))|F}K{I|L};[WP]KV{I|L}PK{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}PWPKV{I|L}K{I|L};[VP]KW{I|L}KP{M(Oxidation (M))|F}{I|L};[VP]K{I|L}WKP{M(Oxidation (M))|F}{I|L};[VP]K{I|L}KWP{M(Oxidation (M))|F}{I|L};[WP]KVP{I|L}{M(Oxidation (M))|F}K{I|L};[WP]KVP{I|L}K{M(Oxidation (M))|F}{I|L} 6.0607;5.2876;4.9965;4.8641;4.709;4.4158;4.4158;4.4158;4.3059;4.1735 -;-;-;-;+;-;-;-;-;- + 1061 + 1 1.582 101596.0 0.3899999856948852 13737 5180 18915 HBL1_DMSO_200M_050219_2,18919 HBL1_DMSO_200M_050219_2,18919,FPWPKVLKI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18921 102.21 18.0 6288500.0 25 0 778230.0 + 11938 GMPDFLEKL 9 91 525.270178086245 1048.52580323929 2 525.2705566287041 MULTI CID FTMS 0 0 0 18920 2974591.0 0.6470105741502115 3 -0.1096267700195312 1 Unmodified _GMPDFLEKL_ ENSG00000084090|ENST00000337288|STARD7 53.832793166522166 0.0319663582346103 4 {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L} 9 0 + 55.901 0.0 0.0 5.3314 5.3314 80.856 0.0 0.0 0.0 7.147642715192504 7.8186565554395315 7.147642715192504 7.8186565554395315 0 0.3807196863200844 0.0 1.1549471895720984 0.2742275032520141 + + {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L};[DP]{M(Oxidation (M))|F}{I|L}EK{I|L}{[MG]|[TS]};[DP]{M(Oxidation (M))|F}{I|L}TR{I|L}{[MG]|[TS]};[DP]{M(Oxidation (M))|F}E{I|L}K{I|L}{[MG]|[TS]};{[MG]|[TS]}{I|L}[MD]{I|L}EK{I|L};[DP]{M(Oxidation (M))|F}{I|L}T[VG]{I|L}{[MG]|[TS]};{[{M(Oxidation (M))|F}D]|MM}P{I|L}EK{I|L}{[MG]|[TS]};{[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}{I|L}{I|L}[SG];{[{M(Oxidation (M))|F}D]|MM}P{I|L}TR{I|L}{[MG]|[TS]};{[{M(Oxidation (M))|F}D]|MM}PE{I|L}K{I|L}{[MG]|[TS]} 5.3314;4.5857;4.2986;4.0157;3.86;3.4204;2.5103;2.5001;2.2232;1.9403 +;-;-;-;-;-;-;-;-;- + 424 + 1 1.582 92966.2 1.0 13738 5181 18920 HBL1_DMSO_200M_050219_2,18921 HBL1_DMSO_200M_050219_2,18921,GMPDFLEKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18922 102.22 800.0 121060.0 25 0 3044.7 -1 0 134 1126.535239929701 0 1126.382128894329 PEAK CID FTMS 0 0 0 18920 28192.921875 0.347038927048136 -2 0.0653076171875 2 4 Y{I|L}MTD 5 -1 24.073 0.0 0.0 1.0694 0.0 0.0 1385.6651931388958 239.10418115787343 1624.7693742967692 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3807196863200843 0.0 Y{I|L}MTD 1.0694 - 943 + 1 1.582 61337.4 0.5799999833106995 13739 5181 18920 HBL1_DMSO_200M_050219_2,18922 HBL1_DMSO_200M_050219_2,18922, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18923 102.23 179.0 638050.0 25 0 35090.0 + 1255 AILGPTFTL 9 124 932.5461942716928 931.5389178050928 1 932.5470458865166 MULTI CID FTMS 0 0 0 18920 306223.1875 0.7993267122078073 -2 0.0653076171875 3 Unmodified _AILGPTFTL_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 97.07464715276576 0.0121042244793311 4 [TP]G{M(Oxidation (M))|F}T{I|L}{I|L}A{I|L} 9 7 + 68.488 0.0 0.0 7.3522 7.3522 78.02 0.0 0.0 0.0 17.768024924119665 14.973024840566469 14.973024840566469 0.7268250975604218 0 0.0 1.0457574905606752 2.5 0.0 [TP]G{M(Oxidation (M))|F}T{I|L}{I|L}A{I|L};[TP]G{M(Oxidation (M))|F}T{I|L}A{I|L}{I|L};[TP]G{M(Oxidation (M))|F}{I|L}A{I|L}T{I|L};[TP]G{M(Oxidation (M))|F}{I|L}T{I|L}A{I|L};[TP]{M(Oxidation (M))|F}GT{I|L}{I|L}A{I|L};[TP]G{M(Oxidation (M))|F}{I|L}TA{I|L}{I|L};[TP]{M(Oxidation (M))|F}GT{I|L}A{I|L}{I|L};[TP]{M(Oxidation (M))|F}G{I|L}A{I|L}T{I|L};[TP]G{M(Oxidation (M))|F}{I|L}AT{I|L}{I|L};[TP]G{I|L}{M(Oxidation (M))|F}A{I|L}T{I|L} 7.3522;7.2741;7.1844;6.7969;6.7374;6.7189;6.6594;6.5696;6.5163;6.434 -;-;-;-;-;-;-;-;-;- 2237 1 1.582 78552.5 1.0 13740 5181 18920 HBL1_DMSO_200M_050219_2,18923 HBL1_DMSO_200M_050219_2,18923,AILGPTFTL True True AILGPTFTL 102.22813 932.547045886517 2871636.5 18920.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 7.221406141916911 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18925 102.24 393.0 501840.0 25 0 115420.0 + 3986 DALRLYLI 8 121 488.7951028032055 975.575652673211 2 488.7950012087822 MULTI CID FTMS 0 0 0 18924 247699.34375 0.554496625994099 2 -0.0876388549804687 1 Unmodified _DALRLYLI_ ENSG00000196305|ENST00000443024|IARS1 65.23502041540118 0.1164516490932339 4 {[DA]|[EG]}{I|L}R{I|L}Y{I|L}{I|L} 8 0 + 74.691 0.0 0.0 7.6561 7.6561 95.441 0.0 0.0 0.0 23.4556125503638 41.71494954930608 23.4556125503638 26.879839358585865 0 1.774227503252014 1.5228787452803376 0.2742275032520141 0.6861818737241735 + + {[DA]|[EG]}{I|L}R{I|L}Y{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GR{I|L}Y{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}AR{I|L}Y{I|L}{I|L};[Y{I|L}][R{I|L}]AD{I|L}{I|L};[Y{I|L}][R{I|L}]DA{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}G[VG]{I|L}Y{I|L}{I|L};[QA][KQ]{I|L}Y{I|L}{I|L};[Y{I|L}][R{I|L}]A{I|L}D{I|L};[Y{I|L}][R{I|L}]{I|L}AD{I|L};[Y{I|L}][{I|L}V]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L} 7.6561;4.9008;4.7934;4.6959;4.0788;3.9514;3.5959;3.5937;3.2852;3.0138 +;-;-;-;-;-;-;-;-;- + 350 1 1.602 150234.3 1.0 13741 5182 18924 HBL1_DMSO_200M_050219_2,18925 HBL1_DMSO_200M_050219_2,18925,DALRLYLI True True DALRLYLI 102.23886 488.795001208782 5770342.5 18924.0 ENSG00000196305|ENST00000443024|IARS1 4.84309188524882 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18926 102.25 757.0 487830.0 25 0 107890.0 35056 SQTLQPTL 8 131 887.4831967094153 886.4759202428153 1 887.4869872927666 MULTI CID FTMS 0 0 0 18924 172976.328125 0.5643188225980671 -1 0.0219879150390625 2 Unmodified _SQTLQPTL_ ENST00000216039.9_1_22:39081989-39082295:-|nuORF 10.823927491677226 0.7510103885582552 4 [QP]A{I|L}R{M(Oxidation (M))|F}[VG] 8 6 + 22.853 0.0 0.0 2.578 2.578 65.819 0.0 0.0 0.0 6.989700043360186 2.710667722865381 2.710667722865381 3.010299956639809 0 0.0 0.0 0.0 0.0 [QP]A{I|L}R{M(Oxidation (M))|F}[VG];[QP]A{I|L}{M(Oxidation (M))|F}R[VG];[QP]A{I|L}[VG]{M(Oxidation (M))|F}[VG];[{I|L}T][HT]{I|L}{M(Oxidation (M))|F}[VG];[QP]A[VG]{I|L}{M(Oxidation (M))|F}[VG];[QP]A{I|L}{M(Oxidation (M))|F}[VG][VG];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NP[KP][TP];[{I|L}T][WR]N[TP];[QP]G{[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}[VG];KKQGPN{[ES]|[DT]|[{I|L}C]} 2.578;2.2384;1.5332;1.3606;1.1936;1.1936;0.88148;0.8362;0.31579;0.26002 -;-;-;-;-;-;-;-;-;- 871 1 1.602 236876.8 1.0 13742 5182 18924 HBL1_DMSO_200M_050219_2,18926 HBL1_DMSO_200M_050219_2,18926,SQTLQPTL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18927 102.26 304.0 337270.0 25 0 52219.0 + 5535 DMIILPEM 8 93 961.4727328757954 960.4654564091952 1 961.4743530154228 MULTI CID FTMS 0 0 0 18924 163968.515625 1.0 0 0.0 3 Unmodified _DMIILPEM_ ENSG00000115268|ENST00000592588|RPS15 42.09456458481378 0.1992492688217789 4 {I|L}{I|L}DM{I|L}C(Carbamidomethyl (C))V 7 7 46.837 0.0 0.0 4.8765 0.0 0.0 0.0 113.01792157937032 113.01792157937032 25.18930178484529 0.0 0.0 0.0 0 0.8494850021680094 1.0969100130080565 0.6694451763165201 0.0 {I|L}{I|L}DM{I|L}C(Carbamidomethyl (C))V 4.8765 - 681 1 1.602 72218.5 1.0 13743 5182 18924 HBL1_DMSO_200M_050219_2,18927 HBL1_DMSO_200M_050219_2,18927,DMIILPEM False True DMIILPEM 102.25758 961.474353015423 1490101.125 18924.0 ENSG00000115268|ENST00000592588|RPS15 1.755265434583028 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18929 102.27 800.0 105810.0 25 0 9238.1 -1 0 124 1106.204227368564 0 1106.004199206829 PEAK CID FTMS 0 0 0 -1 0 1 4 Q 1 -1 3.9794 0.0 0.0 0.18003 0.0 0.0 1858.218439012716 221.0967959039672 2079.315234916683 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.18003 - 25 + 1 1.602 55258.7 0.5799999833106995 13744 5183 18928 HBL1_DMSO_200M_050219_2,18929 HBL1_DMSO_200M_050219_2,18929, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18930 102.29 800.0 68760.0 25 0 2680.9 -1 0 94 1169.194018542767 0 1169.194018542767 PEAK CID FTMS 0 0 0 -1 0 2 4 E 1 -1 4.6041 0.0 0.0 0.19706 0.0 0.0 1211.5188221423716 992.7686251276 2204.2874472699714 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19706 - 11 + 1 1.602 38863.7 0.7099999785423279 13745 5183 18928 HBL1_DMSO_200M_050219_2,18930 HBL1_DMSO_200M_050219_2,18930, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18931 102.3 466.0 568310.0 25 0 21418.0 -1 0 224 899.5476593777717 0 899.3462402224541 PEAK CID FTMS 0 0 0 18928 19452.03515625 0.5701172446544507 -1 0.0293731689453125 3 4 MAH 3 -1 9.2968 0.0 0.0 0.51733 0.0 0.0 898.6714163123808 556.2586153619749 1454.9300316743556 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MAH 0.51733 - 1599 + 1 1.602 166722.2 1.0 13746 5183 18928 HBL1_DMSO_200M_050219_2,18931 HBL1_DMSO_200M_050219_2,18931, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18932 102.3 344.0 79666.0 25 0 3249.4 -1 0 69 1111.273120105267 0 1111.273120105267 PEAK CID FTMS 0 0 0 -1 0 4 4 Y 1 -1 4.6041 0.0 0.0 0.20734 0.0 0.0 946.8545155017468 1107.5763643854127 2054.43087988716 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.20734 - 4 + 1 1.602 26746.9 1.0 13747 5183 18928 HBL1_DMSO_200M_050219_2,18932 HBL1_DMSO_200M_050219_2,18932, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18933 102.32 800.0 260900.0 25 0 27048.0 + 42899 VVPIGLYS 8 96 424.24954318569934 846.4845334381987 2 424.2494079470634 MULTI CID FTMS 0 0 0 18928 89263.59375 1.0 0 0.0 5 Unmodified _VVPIGLYS_ REV__ENSG00000136002|ENST00000409359|ARHGEF4 5.760428011301431 0.7893668129297577 4 T 1 -1 18.227 0.0 0.0 2.1532 0.0 0.0 578.37744368245 164.037493083574 742.414936766024 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 T 2.1532 - 17 1 1.602 166687.4 0.3600000143051147 13748 5183 18928 HBL1_DMSO_200M_050219_2,18933 HBL1_DMSO_200M_050219_2,18933,VVPIGLYS False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18935 102.32 59.0 2448700.0 25 0 105330.0 -1 0 123 872.4171467820075 3485.63948126163 4 872.6686889529228 MULTI CID FTMS 0 0 0 18934 1036659.75 0.0637138569467272 24 -0.8535919189453125 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 37.089 0.0 0.0 1.064 0.0 0.0 0.0 2445.0248321739923 2445.0248321739923 -0.0907372545153535 0.0 -0.0907372545153535 0.0 0 0.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.064 - 177 1 1.678 98300.9 1.0 13749 5184 18934 HBL1_DMSO_200M_050219_2,18935 HBL1_DMSO_200M_050219_2,18935, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18936 102.33 800.0 219910.0 25 0 19907.0 39783 VEQITLLIS 9 141 508.3055050708798 1014.5964572085596 2 508.3057128787041 MULTI CID FTMS 0 0 0 18934 65771.7421875 0.2665775687575069 4 -0.1304931640625 2 Unmodified _VEQITLLIS_ ENSG00000074964|ENST00000361221|ARHGEF10L;ENST00000469726.5_1_1:17942561-18023872:+|nuORF;nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L;nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L 61.08992128646608 0.0254786290039527 4 {[QN]|[E{I|L}]|[KN]}N{I|L}T{I|L}{I|L}{[TV]|[{I|L}S]} 9 2 + 63.282 0.0 0.0 6.2371 6.2371 74.454 0.0 0.0 0.0 0.8270307517400113 5.642492736872597 0.8270307517400113 0.8270307517400113 0 0.7396518287104438 1.5228787452803376 1.66944517631652 0.6549471895720985 {[QN]|[E{I|L}]|[KN]}N{I|L}T{I|L}{I|L}{[TV]|[{I|L}S]};[{I|L}T]QEV{I|L}{I|L}{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}T{I|L}{I|L}{[TV]|[{I|L}S]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}T{I|L}{I|L}{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}GG{I|L}T{I|L}{I|L}{[TV]|[{I|L}S]};[{I|L}T][AG]EV{I|L}{I|L}{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}QTV{I|L}{I|L}{[TV]|[{I|L}S]};[{I|L}T]QE{I|L}V{I|L}{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}QVT{I|L}{I|L}{[TV]|[{I|L}S]};[Q{I|L}]D{I|L}T{I|L}{I|L}{[TV]|[{I|L}S]} 6.2371;6.1556;5.9152;5.4663;5.3296;5.2481;5.2455;5.2051;5.0889;5.0329 -;-;+;-;-;-;-;-;-;- + 3287 1 1.678 134010.9 0.7400000095367432 13750 5184 18934 HBL1_DMSO_200M_050219_2,18936 HBL1_DMSO_200M_050219_2,18936,VEQITLLIS True True TLQEVLLTV 102.3348 508.305712878704 3451536.25 18934.0 ENSG00000100450|ENST00000216338|GZMH 3.792125145594279 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18938 102.34 59.0 4035100.0 25 0 533070.0 35864 SVLILASY 8 62 433.2546310283608 864.4947091235216 2 433.2549316287041 MULTI CID FTMS 0 0 0 18937 909377.375 0.6749408164266899 4 -0.1612777709960937 1 Unmodified _SVLILASY_ nc|ENSG00000176510|Q8NH08|OR10AC1 9.347437153973935 0.7675937258251505 4 T 1 8 16.906 0.0 0.0 1.9556 0.0 0.0 596.3846872141664 164.03920923404533 760.4238964482117 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.3807196863200844 0.0 T 1.9556 - 15 + 1 1.678 186682.0 1.0 13751 5185 18937 HBL1_DMSO_200M_050219_2,18938 HBL1_DMSO_200M_050219_2,18938,SVLILASY False False False False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 18939 102.34 192.0 1244200.0 25 0 122410.0 + 11790 GLLPDVPSL 9 151 910.524248459148 909.516971992548 1 910.525927722454 MULTI CID FTMS 0 0 0 18937 611365.0 0.6302702719420373 5 -0.2368698120117187 2 Unmodified _GLLPDVPSL_ ENSG00000125505|ENST00000245615|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;nc|ENSG00000125505|Q96N66-3|MBOAT7 81.61307344734483 0.0171259190214613 4 [DP]VG{I|L}{I|L}P{[TV]|[{I|L}S]} 9 6 + 54.737 0.0 0.0 6.0183 6.0183 76.172 0.0 0.0 0.0 2.7056131274144875 2.7056131274144875 2.7056131274144875 2.218487496163561 0 0.7742275032520141 1.3979400086720375 0.6694451763165201 0.0 [DP]VG{I|L}{I|L}P{[TV]|[{I|L}S]};[DP]V{I|L}G{I|L}P{[TV]|[{I|L}S]};{[VA]|[{I|L}G]}{I|L}PDVP{[TV]|[{I|L}S]};[DP]V{I|L}AVP{[TV]|[{I|L}S]};[DP]{I|L}VG{I|L}P{[TV]|[{I|L}S]};[DP]{I|L}VAVP{[TV]|[{I|L}S]};{[VA]|[{I|L}G]}{I|L}PDVT[VP];{[VA]|[{I|L}G]}{I|L}VDPP{[TV]|[{I|L}S]};{[VA]|[{I|L}G]}V{I|L}DPP{[TV]|[{I|L}S]};{[VA]|[{I|L}G]}V[DP]{I|L}P{[TV]|[{I|L}S]} 6.0183;5.7744;5.7208;5.5445;5.1762;4.9463;4.8892;4.8324;4.0344;3.6817 -;-;+;-;-;-;-;-;-;- + 586 1 1.678 153623.3 1.0 13752 5185 18937 HBL1_DMSO_200M_050219_2,18939 HBL1_DMSO_200M_050219_2,18939,GLLPDVPSL True True GLLPDVPSL 102.34285 910.525927722454 10572590.0 18937.0 nc|ENSG00000125505|Q96N66-3|MBOAT7;;ENSG00000125505|ENST00000245615|MBOAT7;;nc|ENSG00000125505|Q96N66-2|MBOAT7 4.090326011180878 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18940 102.35 559.0 358830.0 25 0 18832.0 -1 0 211 814.0602456724662 0 814.3625976443291 PEAK CID FTMS 0 0 0 -1 0 3 4 R 1 -1 8.0989 0.0 0.0 0.49806 0.0 0.0 750.631169156125 716.3320406549436 1466.9632098110687 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 R 0.49806 - 250 + 1 1.678 128984.4 1.0 13753 5185 18937 HBL1_DMSO_200M_050219_2,18940 HBL1_DMSO_200M_050219_2,18940, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18941 102.36 378.0 451400.0 25 0 35939.0 + 9797 FPANVMDVI 9 136 1005.5065769666786 1004.4993005000786 1 1005.511279284954 MULTI CID FTMS 0 0 0 18937 152016.515625 0.0788690246505074 16 -0.5760269165039062 4 Unmodified _FPANVMDVI_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF 92.8221339359638 0.0138398038803217 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANVMDV{I|L} 9 0 + 90.077 0.0 0.0 8.9673 8.9673 94.49 0.0 0.0 0.0 9.902401627108432 16.478174818886373 9.902401627108432 9.902401627108432 0 0.2742275032520141 1.5228787452803376 0.5796896906561032 1.947621246364342 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANVMDV{I|L};[PA]N{M(Oxidation (M))|F}VMDV{I|L};[PA]NV{M(Oxidation (M))|F}MDV{I|L};{[QG]|[NA]}P{M(Oxidation (M))|F}VMDV{I|L};[PA]{M(Oxidation (M))|F}NVMDV{I|L};{[QG]|[NA]}PV{M(Oxidation (M))|F}MDV{I|L};[QP]G{M(Oxidation (M))|F}VMDV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANMVDV{I|L};[QP]GV{M(Oxidation (M))|F}MDV{I|L};[NP]A{M(Oxidation (M))|F}VMDV{I|L} 8.9673;7.9815;7.9022;7.5301;7.5066;7.4508;7.276;7.241;7.1967;6.9763 +;-;-;-;-;-;-;-;-;- + 4921 1 1.678 111644.1 1.0 13754 5185 18937 HBL1_DMSO_200M_050219_2,18941 HBL1_DMSO_200M_050219_2,18941,FPANVMDVI True True FPANVMDVI 102.35951 1005.51127928495 42562318.0 18937.0 ENST00000581230.5_1_17:62498125-62502378:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5 6.619721094767253 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18942 102.36 266.0 434300.0 25 0 6909.9 -1 0 149 1124.465103866026 0 1124.465136706829 PEAK CID FTMS 0 0 0 18937 120741.609375 0.9204247731533648 -1 0.0187530517578125 5 4 R 1 -1 6.9897 0.0 0.0 0.31108 0.0 0.0 1608.1003078525323 479.6993502252563 2087.799658077789 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.31108 - 62 + 1 1.678 74491.5 1.0 13755 5185 18937 HBL1_DMSO_200M_050219_2,18942 HBL1_DMSO_200M_050219_2,18942, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18943 102.38 800.0 310960.0 25 0 34563.0 -1 0 119 1044.920947253704 0 1044.920947253704 PEAK CID FTMS 0 0 0 -1 0 6 4 {I|L}Q{I|L}P{I|L}S{M(Oxidation (M))|F} 7 -1 17.303 0.0 0.0 0.82875 0.0 0.0 1062.2540312814651 224.10451685123283 1286.358548132698 0.0 0.0 0.0 0.0 0 0.0 0.0 0.788106835214472 0.3494850021680094 {I|L}Q{I|L}P{I|L}S{M(Oxidation (M))|F} 0.82875 - 856 + 1 1.678 151777.5 0.6899999976158142 13756 5185 18937 HBL1_DMSO_200M_050219_2,18943 HBL1_DMSO_200M_050219_2,18943, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18944 102.38 292.0 837140.0 25 0 41836.0 -1 0 218 797.668689932845 0 797.5996581912041 PEAK CID FTMS 0 0 0 -1 0 7 4 A 1 -1 6.9897 0.0 0.0 0.43869 0.0 0.0 1387.216623784832 132.04595361881096 1519.262577403643 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.43869 - 615 + 1 1.678 153922.6 1.0 13757 5185 18937 HBL1_DMSO_200M_050219_2,18944 HBL1_DMSO_200M_050219_2,18944, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18945 102.39 260.0 925280.0 25 0 44009.0 -1 QRCWNYCWSQC 11 220 824.3192169062538 0 824.5651122927666 PEAK CID FTMS 0 0 0 -1 0 8 3 Carbamidomethyl (C) _QRC(Carbamidomethyl (C))WNYC(Carbamidomethyl (C))WSQC(Carbamidomethyl (C))_ ENST00000454171.1_1_7:84657519-84657798:+|nuORF 0.3070304955306653 0.4761840153648598 4 PQGYY 5 -1 14.157 0.0 0.0 0.85974 0.0 0.0 919.2809986545012 116.05114923648672 1035.332147890988 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PQGYY 0.85974 - 380 + 1 1.678 152187.4 1.0 13758 5185 18937 HBL1_DMSO_200M_050219_2,18945 HBL1_DMSO_200M_050219_2,18945,QRCWNYCWSQC False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18947 102.4 560.0 652440.0 25 0 61128.0 + 22664 LPYSIRVLL 9 123 537.3398561992066 1072.665159465213 2 537.3398925662041 MULTI CID FTMS 0 0 0 18946 161321.8125 0.2827835823642629 5 -0.2658538818359375 1 Unmodified _LPYSIRVLL_ ENSG00000136381|ENST00000258886|IREB2;nc|ENSG00000136381|P48200-2|IREB2 106.94017166704064 0.0073169432358171 4 {I|L}PYS{I|L}RV{I|L}{I|L} 9 0 + 102.26 0.0 0.0 9.5335 9.5335 91.911 0.0 0.0 0.0 69.612664166913 14.09256854528806 14.09256854528806 8.221740651475642 0 2.531099654314411 1.6989700043360187 1.0387254899964358 0.2742275032520141 + + {I|L}PYS{I|L}RV{I|L}{I|L};{I|L}PY{I|L}SRV{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}RV{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SRV{I|L}{I|L}{I|L};{I|L}P{I|L}YSRV{I|L}{I|L};[{I|L}P]YSRV{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L}RV{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}SR{I|L}V{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{I|L}SRV{I|L}{I|L};[{I|L}P]YSR{I|L}V{I|L}{I|L} 9.5335;8.7671;7.9234;7.7394;7.669;7.6443;7.5581;7.2151;7.1569;7.1199 +;-;-;-;-;-;-;-;-;- + 1340 + 1 1.812 295696.6 1.0 13759 5186 18946 HBL1_DMSO_200M_050219_2,18947 HBL1_DMSO_200M_050219_2,18947,LPYSIRVLL True True LPYSIRVLL 102.40177 537.339892566204 7586661.0 18946.0 ENSG00000136381|ENST00000258886|IREB2;;nc|ENSG00000136381|P48200-2|IREB2 5.448374271392822 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18948 102.4 98.0 2063100.0 25 0 682960.0 -1 0 72 372.2532934273788 742.4920339215575 2 372.2527648806572 MULTI CID FTMS 0 0 0 18946 549393.4375 0.5696637839233444 -3 0.1307373046875 2 4 K 1 -1 16.99 0.0 0.0 2.2882 0.0 0.0 596.3860291381576 0.0 596.3860291381576 0.0 2.2577249674798594 0.0 0.0 0 0.0 0.0 0.0 0.0 K 2.2882 - 6 + 1 1.812 165761.8 1.0 13760 5186 18946 HBL1_DMSO_200M_050219_2,18948 HBL1_DMSO_200M_050219_2,18948, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18949 102.41 209.0 713770.0 25 0 80175.0 + 17326 KLVEFDFLGA 10 151 569.8106896825203 1137.6068264318403 2 569.8109008669853 MULTI CID FTMS 0 0 0 18946 277084.78125 0.5401723794775614 5 -0.2658538818359375 3 Unmodified _KLVEFDFLGA_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 38.558800761779466 0.1727858048679977 4 [{I|L}V]KE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA 10 2 + 75.835 0.0 0.0 6.6662 6.6662 75.788 0.0 0.0 0.0 0.7074807851076343 6.53212513775344 0.7074807851076343 0.7074807851076343 0 0.8494850021680094 0.585026652029182 1.5114393726401687 0.0 [{I|L}V]KE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA;[K{I|L}]VE{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA;[{I|L}V]K{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}{I|L}GA;[K{I|L}]V{M(Oxidation (M))|F}ED{M(Oxidation (M))|F}{I|L}GA;{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA;[{I|L}V]EK{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA;{I|L}{I|L}DK{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}GA;[{I|L}P]T[YK]E{M(Oxidation (M))|F}{I|L}GA;[Y{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{M(Oxidation (M))|F}{I|L}GA;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}D{M(Oxidation (M))|F}{I|L}GA 6.6662;6.604;6.2351;6.1729;6.0637;6.0517;6.0048;5.7112;5.6926;5.6443 -;+;-;-;-;-;-;-;-;- + 4225 1 1.812 115415.0 1.0 13761 5186 18946 HBL1_DMSO_200M_050219_2,18949 HBL1_DMSO_200M_050219_2,18949,KLVEFDFLGA False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18950 102.42 602.0 785890.0 25 0 80154.0 + 33768 SLAQYLINV 9 162 510.7899662534266 1019.5653795736532 2 510.7895690798759 MULTI CID FTMS 0 0 0 18946 195735.421875 0.2442066012276272 -3 0.1307373046875 4 Unmodified _SLAQYLINV_ ENSG00000197111|ENST00000546463|PCBP2;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 71.70789743142352 0.0204387454931768 4 {[TV]|[{I|L}S]}AQY{I|L}{I|L}NV 9 0 + 74.725 0.0 0.0 7.3291 7.3291 84.965 0.0 0.0 0.0 4.759198431955639 8.384767769392738 4.759198431955639 4.759198431955639 0 1.0629529932484498 2.0 1.721848749616356 0.3054621874040891 + + {[TV]|[{I|L}S]}AQY{I|L}{I|L}NV;[Y{I|L}]QAS{I|L}{I|L}NV;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L}{I|L}NV;{[TV]|[{I|L}S]}A[AG]Y{I|L}{I|L}NV;[YQ]A{I|L}S{I|L}{I|L}NV;[QA]Y{I|L}S{I|L}{I|L}NV;[YQ]{I|L}AS{I|L}{I|L}NV;[Y{I|L}]QA{I|L}S{I|L}NV;[Y{I|L}][AG]AS{I|L}{I|L}NV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q{I|L}S{I|L}{I|L}NV 7.3291;6.8623;6.3283;6.1264;5.771;5.7645;5.5863;5.3829;5.3764;5.3448 +;-;-;-;-;-;-;-;-;- + 2781 1 1.812 352525.1 1.0 13762 5186 18946 HBL1_DMSO_200M_050219_2,18950 HBL1_DMSO_200M_050219_2,18950,SLAQYLINV True True SLAQYLINV 102.41842 510.789569079876 21859761.0 18946.0 nc|ENSG00000197111|Q15366|PCBP2;;nc|ENSG00000197111|Q15366-2|PCBP2;;nc|ENSG00000197111|Q15366-6|PCBP2;;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;;nc|ENSG00000197111|Q15366-8|PCBP2;;nc|ENSG00000197111|Q15366-4|PCBP2;;ENSG00000197111|ENST00000546463|PCBP2;;nc|ENSG00000197111|Q15366-5|PCBP2;;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;;nc|ENSG00000197111|Q15366-7|PCBP2 5.39876127243042 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18951 102.42 100.0 2810300.0 25 0 129410.0 -1 0 238 860.2428817900338 0 860.0517455935478 PEAK CID FTMS 0 0 0 -1 0 5 4 QGYY 4 -1 14.781 0.0 0.0 0.86015 0.0 0.0 1088.194033264053 116.05121790103748 1204.2452511650902 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QGYY 0.86015 - 1476 + 1 1.812 175856.8 1.0 13763 5186 18946 HBL1_DMSO_200M_050219_2,18951 HBL1_DMSO_200M_050219_2,18951, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18953 102.43 324.0 633960.0 25 0 75976.0 + 25622 NFPEHIFPAL 10 140 592.8085179881461 1183.6024830430922 2 592.8083984255791 MULTI CID FTMS 0 0 0 18952 224651.0 0.0364342915787776 20 -0.7185592651367188 1 Unmodified _NFPEHIFPAL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 81.9152076656658 0.0154982280583276 4 {[YC]|[HE]}P{M(Oxidation (M))|F}{I|L}N{M(Oxidation (M))|F}PA{I|L} 10 5 + 71.55 0.0 0.0 6.0451 6.0451 81.017 0.0 0.0 0.0 8.621381029421912 37.671746167648855 8.621381029421912 5.013487579716767 0 1.1989700043360187 0.7958800173440752 1.113364334130467 0.7614393726401688 {[YC]|[HE]}P{M(Oxidation (M))|F}{I|L}N{M(Oxidation (M))|F}PA{I|L};{[YC]|[HE]}P{M(Oxidation (M))|F}N{I|L}{M(Oxidation (M))|F}PA{I|L};[EP]H{M(Oxidation (M))|F}{I|L}N{M(Oxidation (M))|F}PA{I|L};{[YC]|[HE]}P{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}NPA{I|L};[EP]H{M(Oxidation (M))|F}N{I|L}{M(Oxidation (M))|F}PA{I|L};{[YC]|[HE]}P{M(Oxidation (M))|F}{I|L}GG{M(Oxidation (M))|F}PA{I|L};[H{I|L}]{M(Oxidation (M))|F}[EP]N{M(Oxidation (M))|F}PA{I|L};{[YC]|[HE]}[KQ]TN{M(Oxidation (M))|F}PA{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NEH{I|L}{M(Oxidation (M))|F}PA{I|L};[EP]H{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}NPA{I|L} 6.0451;5.6215;5.2021;4.7923;4.7785;4.6275;4.4993;4.3166;3.9895;3.9494 -;-;-;-;-;-;-;-;-;- 5118 1 1.812 155135.1 1.0 13764 5187 18952 HBL1_DMSO_200M_050219_2,18953 HBL1_DMSO_200M_050219_2,18953,NFPEHIFPAL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18954 102.43 262.0 621260.0 25 0 8198.1 -1 0 117 1058.945971667767 0 1058.945971667767 PEAK CID FTMS 0 0 0 -1 0 2 4 T 1 -1 7.1041 0.0 0.0 0.33575 0.0 0.0 1789.7173389880747 222.08918176822505 2011.8065207563 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 T 0.33575 - 31 + 1 1.812 97367.8 1.0 13765 5187 18952 HBL1_DMSO_200M_050219_2,18954 HBL1_DMSO_200M_050219_2,18954, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18955 102.44 99.0 1947700.0 25 0 23816.0 -1 0 157 860.2428817900338 0 860.2422973513603 PEAK CID FTMS 0 0 0 18952 365600.71875 1.0 0 0.0 3 4 QGYG 4 -1 11.402 0.0 0.0 0.66351 0.0 0.0 1088.1914387736238 222.0889681451781 1310.280406918802 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QGYG 0.66351 - 735 + 1 1.812 119776.6 1.0 13766 5187 18952 HBL1_DMSO_200M_050219_2,18955 HBL1_DMSO_200M_050219_2,18955, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18956 102.44 267.0 332170.0 25 0 9734.1 -1 0 105 1040.700522750799 0 1040.851000964642 PEAK CID FTMS 0 0 0 -1 0 4 4 N 1 -1 3.5392 0.0 0.0 0.1702 0.0 0.0 1743.2419135662487 219.07727991275627 1962.319193479005 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 N 0.1702 - 32 + 1 1.812 58812.3 1.0 13767 5187 18952 HBL1_DMSO_200M_050219_2,18956 HBL1_DMSO_200M_050219_2,18956, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18957 102.44 158.0 1681700.0 25 0 83961.0 + -1 ENWCSKCCYHM 11 249 795.7872782667437 0 795.8051025271416 PEAK CID FTMS 0 0 0 -1 0 5 3 Carbamidomethyl (C),Oxidation (M) _ENWC(Carbamidomethyl (C))SKC(Carbamidomethyl (C))C(Carbamidomethyl (C))YHM(Oxidation (M))_ REV__ENSG00000112659|ENST00000252050|CUL9;REV__ENST00000515773.5_1_6:43164260-43192180:+|nuORF;REV__nc|ENSG00000112659|Q8IWT3-3|CUL9 0.2690200627634905 0.4761840153648598 4 KQGY{M(Oxidation (M))|F} 5 -1 13.276 0.0 0.0 0.83521 0.0 0.0 831.1935007700123 132.04602991275627 963.2395306827684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KQGY{M(Oxidation (M))|F} 0.83521 - 1147 + 1 1.812 169586.1 1.0 13768 5187 18952 HBL1_DMSO_200M_050219_2,18957 HBL1_DMSO_200M_050219_2,18957,ENWCSKCCYHM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18958 102.45 153.0 4769700.0 25 0 180670.0 -1 0 341 844.2430139520803 0 844.3360473513603 PEAK CID FTMS 0 0 0 -1 0 6 4 Y[PA]QGYY 7 -1 11.19 0.0 0.0 0.66353 0.0 0.0 725.0184853242794 116.05128656558828 841.0697718898676 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y[PA]QGYY 0.66353 - 11683 + 1 1.812 458929.9 1.0 13769 5187 18952 HBL1_DMSO_200M_050219_2,18958 HBL1_DMSO_200M_050219_2,18958, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18960 102.45 227.0 889600.0 25 0 51661.0 -1 DYMKWFFYDLP 11 219 770.8431769384631 0 770.8914062380791 PEAK CID FTMS 0 0 0 -1 0 1 Oxidation (M) _DYM(Oxidation (M))KWFFYDLP_ ENST00000480745.5_1_20:43595209-43601992:+|nuORF 1.3295316138638542 0.4761840153648598 4 APQGY{M(Oxidation (M))|F} 6 -1 17.457 0.0 0.0 1.1338 0.0 0.0 741.3047487970449 132.04599939517814 873.350748192223 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 APQGY{M(Oxidation (M))|F} 1.1338 - 1825 + 1 1.812 136025.6 1.0 13770 5188 18959 HBL1_DMSO_200M_050219_2,18960 HBL1_DMSO_200M_050219_2,18960,DYMKWFFYDLP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18961 102.47 800.0 259440.0 25 0 8898.8 41843 VPYIGIVTI 9 181 974.59173402943 973.58445756283 1 974.6512939333916 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _VPYIGIVTI_ ENSG00000140612|ENST00000268220|SEC11A;ENST00000558924.1_1_15:85213252-85214072:-|nuORF;ENST00000560266.5_1_15:85213252-85223982:-|nuORF;ENST00000560409.5_1_15:85213252-85222467:-|nuORF;nc|ENSG00000140612|P67812-2|SEC11A 26.34127834903884 0.1960301806784604 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VAVVT{I|L} 9 4 + 60.622 0.0 0.0 6.2267 6.2267 78.501 0.0 0.0 0.0 10.937358210544817 17.721110203597497 10.937358210544817 3.0102999566398125 0 0.3494850021680094 0.5528419686577808 0.4766445787094412 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VAVVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}AVVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VG{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}G{I|L}VT{I|L};[VP]Y{I|L}AVVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VGV{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GV{I|L}T{I|L};[VP]Y{I|L}G{I|L}VT{I|L};[VP]Y{I|L}GV{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}V[K{I|L}]E{I|L} 6.2267;5.9175;5.7367;5.4275;4.7544;4.7095;4.4003;4.2643;3.2372;2.9672 -;-;-;-;-;-;-;+;-;- + 3460 1 1.812 131408.2 0.8199999928474426 13771 5188 18959 HBL1_DMSO_200M_050219_2,18961 HBL1_DMSO_200M_050219_2,18961,VPYIGIVTI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18962 102.48 612.0 88152.0 25 0 1673.2 -1 0 113 1194.965747058392 0 1194.965747058392 PEAK CID FTMS 0 0 0 -1 0 3 4 G 1 -1 6.9897 0.0 0.0 0.29271 0.0 0.0 1444.4151844470591 883.4572847955686 2327.872469242628 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.29271 - 57 + 1 1.812 38340.4 1.0 13772 5188 18959 HBL1_DMSO_200M_050219_2,18962 HBL1_DMSO_200M_050219_2,18962, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18963 102.48 98.0 1774700.0 25 0 52076.0 -1 0 97 887.8404910405771 0 887.9136230349541 PEAK CID FTMS 0 0 0 -1 0 4 4 EG 2 -1 10.331 0.0 0.0 0.58246 0.0 0.0 1344.5163044078622 240.06345544986564 1584.5797598577278 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 EG 0.58246 - 181 + 1 1.812 110899.4 1.0 13773 5188 18959 HBL1_DMSO_200M_050219_2,18963 HBL1_DMSO_200M_050219_2,18963, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18964 102.48 90.0 1640700.0 25 0 101870.0 + 21357 LPFLTDTI 8 158 919.5134351508384 918.5061586842382 1 919.5162841677666 MULTI CID FTMS 0 0 0 18959 332723.78125 0.7205072884703253 1 -0.0495376586914062 5 Unmodified _LPFLTDTI_ ENSG00000105568|ENST00000322088|PPP2R1A;ENSG00000137713|ENST00000527614|PPP2R1B;ENST00000468280.5_1_19:52693376-52714746:+|nuORF;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 86.12129899796855 0.0650563179454676 4 [{I|L}P]{M(Oxidation (M))|F}{I|L}TDT{I|L} 8 0 + 75.993 0.0 0.0 8.2735 8.2735 86.108 0.0 0.0 0.0 10.0 16.40978057358332 10.0 4.018637558036673 0 0.5994850021680094 1.3979400086720375 1.1861818737241734 0.0 + + [{I|L}P]{M(Oxidation (M))|F}{I|L}TDT{I|L};[{I|L}P]{M(Oxidation (M))|F}T{I|L}DT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}TDT{I|L};[{I|L}P]{M(Oxidation (M))|F}TD{I|L}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}T{I|L}DT{I|L};[{I|L}T][KQ]TDT{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TD{I|L}T{I|L};{[SA]|[TG]}[KA]{I|L}TDT{I|L};[AG][KT]{I|L}TDT{I|L};[KA]{[SA]|[TG]}{I|L}TDT{I|L} 8.2735;7.836;7.1848;7.0938;6.7473;6.4884;6.005;5.0246;5.0216;4.8098 +;-;-;-;-;-;-;-;-;- + 1324 1 1.812 97486.9 1.0 13774 5188 18959 HBL1_DMSO_200M_050219_2,18964 HBL1_DMSO_200M_050219_2,18964,LPFLTDTI True True LPFLTDTI 102.48171 919.516284167767 3375374.0 18959.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000468280.5_1_19:52693376-52714746:+|nuORF;;nc|ENSG00000137713|P30154-5|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B 5.759164492289226 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18965 102.49 690.0 213710.0 25 0 11063.0 -1 0 133 1028.730761706829 0 1028.730761706829 PEAK CID FTMS 0 0 0 -1 0 6 4 {M(Oxidation (M))|F}AD{I|L} 4 -1 16.16 0.0 0.0 0.7862 0.0 0.0 1384.117515990027 222.0890596979125 1606.2065756879394 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {M(Oxidation (M))|F}AD{I|L} 0.7862 - 1157 + 1 1.812 93013.5 1.0 13775 5188 18959 HBL1_DMSO_200M_050219_2,18965 HBL1_DMSO_200M_050219_2,18965, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18966 102.5 120.0 430050.0 25 0 15359.0 -1 0 111 927.9324828982352 0 927.9324828982352 PEAK CID FTMS 0 0 0 -1 0 7 4 {I|L}V 2 -1 9.464 0.0 0.0 0.5105 0.0 0.0 1271.4753651111205 367.1997164361938 1638.6750815473142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 0.5105 - 39 + 1 1.812 37527.8 1.0 13776 5188 18959 HBL1_DMSO_200M_050219_2,18966 HBL1_DMSO_200M_050219_2,18966, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18968 102.51 394.0 50952.0 25 0 3920.6 7544 EIFMDEWQWK 10 53 706.32029847477 0 706.2844726443291 PEAK CID FTMS 0 0 0 18967 50214.3515625 1.0 0 0.0 1 Unmodified _EIFMDEWQWK_ ENSG00000142185|ENST00000397928|TRPM2;nc|ENSG00000142185|O94759-2|TRPM2;nc|ENSG00000142185|O94759-3|TRPM2 1.3295316138638542 0.3961065659209837 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.915 21403.6 1.0 13777 5189 18967 HBL1_DMSO_200M_050219_2,18968 HBL1_DMSO_200M_050219_2,18968,EIFMDEWQWK False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18969 102.51 291.0 220070.0 25 0 4219.1 -1 0 124 1104.921069324017 0 1104.921069324017 PEAK CID FTMS 0 0 0 -1 0 2 4 P 1 -1 4.6041 0.0 0.0 0.20854 0.0 0.0 1925.694237181434 182.05774866275627 2107.7519858441906 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.20854 - 80 + 1 1.915 47837.5 1.0 13778 5189 18967 HBL1_DMSO_200M_050219_2,18969 HBL1_DMSO_200M_050219_2,18969, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18970 102.53 800.0 668330.0 25 0 5932.6 22835 LRRLRRRRRRV 11 254 797.03397908726 0 796.8231078982353 PEAK CID FTMS 0 0 0 18967 89672.3671875 1.0 0 0.0 3 Unmodified _LRRLRRRRRRV_ ENST00000532004.5_1_11:810000-812833:+|nuORF 0.0 0.4761840153648598 4 PQGQ 4 11 12.132 0.0 0.0 0.76205 0.0 0.0 864.7145513368263 314.1144970498494 1178.8290483866756 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 PQGQ 0.76205 - 2319 + 1 1.915 349805.3 0.949999988079071 13779 5189 18967 HBL1_DMSO_200M_050219_2,18970 HBL1_DMSO_200M_050219_2,18970,LRRLRRRRRRV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18971 102.53 489.0 635110.0 25 0 33204.0 + -1 NQWLRFMMMYT 11 258 784.8391686765026 0 785.0197021365166 PEAK CID FTMS 0 0 0 18967 48980.0703125 0.4384733241066335 -1 0.0495376586914062 4 3 Oxidation (M) _NQWLRFM(Oxidation (M))M(Oxidation (M))M(Oxidation (M))YT_ REV__ENSG00000023171|ENST00000635736|GRAMD1B;REV__ENST00000532581.5_1_11:123431173-123490076:+|nuORF;REV__nc|ENSG00000023171|Q3KR37-2|GRAMD1B;REV__nc|ENSG00000023171|Q3KR37-4|GRAMD1B;REV__nc|ENSG00000023171|Q3KR37|GRAMD1B 2.9952420565917617 0.4761840153648598 4 APQPGY 6 -1 20.126 0.0 0.0 1.2838 0.0 0.0 769.2975257301551 182.0576571100219 951.355182840177 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 APQPGY 1.2838 - 1054 + 1 1.915 201532.9 1.0 13780 5189 18967 HBL1_DMSO_200M_050219_2,18971 HBL1_DMSO_200M_050219_2,18971,NQWLRFMMMYT False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18972 102.54 265.0 223660.0 25 0 4301.9 -1 0 109 1061.71922344 0 1061.634936511517 PEAK CID FTMS 0 0 0 -1 0 5 4 VS 2 -1 10.969 0.0 0.0 0.51706 0.0 0.0 1191.9433164094935 740.3825167291624 1932.325833138656 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VS 0.51706 - 28 + 1 1.915 43524.0 1.0 13781 5189 18967 HBL1_DMSO_200M_050219_2,18972 HBL1_DMSO_200M_050219_2,18972, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18973 102.55 800.0 136000.0 25 0 9214.1 -1 FSLLLCIFWMW 11 183 766.3786821752276 0 766.2783080935478 PEAK CID FTMS 0 0 0 -1 0 6 Carbamidomethyl (C),Oxidation (M) _FSLLLC(Carbamidomethyl (C))IFWM(Oxidation (M))W_ ENST00000417692.1_1_2:48134096-48134625:+|nuORF;ENST00000432064.1_1_2:48132867-48134625:+|nuORF 1.3295316138638542 0.4761840153648598 4 S 1 -1 5.4846 0.0 0.0 0.35829 0.0 0.0 1324.6362420586595 116.05118738345936 1440.687429442119 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.35829 + + 329 + 1 1.915 77280.8 0.7300000190734863 13782 5189 18967 HBL1_DMSO_200M_050219_2,18973 HBL1_DMSO_200M_050219_2,18973,FSLLLCIFWMW False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 18974 102.56 179.0 498520.0 25 0 5367.5 -1 0 77 810.7715905017681 0 811.0762206912041 PEAK CID FTMS 0 0 0 -1 0 7 4 K 1 -1 3.9794 0.0 0.0 0.24571 0.0 0.0 744.0561211913986 744.3430880182249 1488.3992092096237 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.24571 - 35 + 1 1.915 61425.2 1.0 13783 5189 18967 HBL1_DMSO_200M_050219_2,18974 HBL1_DMSO_200M_050219_2,18974, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18975 102.57 800.0 163810.0 25 0 18730.0 + 11939 GMPDFLEKL 9 107 525.270178086245 1048.52580323929 2 525.2715331912041 MULTI CID FTMS 0 0 0 18967 120562.21875 0.0262237834963734 11 -0.3813247680664062 8 Unmodified _GMPDFLEKL_ ENSG00000084090|ENST00000337288|STARD7 38.17557092003332 0.0854718145212029 4 {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L} 9 0 + 52.445 0.0 0.0 5.0018 5.0018 75.763 0.0 0.0 0.0 7.147642715192504 4.363044005075736 4.363044005075736 4.363044005075736 0 0.3807196863200844 0.0 0.7742275032520141 0.2302046884880938 + + {[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}EK{I|L};[DP]{M(Oxidation (M))|F}{I|L}EK{I|L}{[MG]|[TS]};{[MG]|[TS]}PD{M(Oxidation (M))|F}{I|L}E{I|L}K;[DP]{M(Oxidation (M))|F}{I|L}TR{I|L}{[MG]|[TS]};{[MG]|[TS]}{I|L}[MD]{I|L}EK{I|L};[DP]{M(Oxidation (M))|F}{I|L}T[VG]{I|L}{[MG]|[TS]};{[MG]|[TS]}P[HT]HEK{I|L};{[MG]|[TS]}{I|L}[MD]{I|L}E{I|L}K;{[MG]|[TS]}P[HT]HE{I|L}K;{[{M(Oxidation (M))|F}D]|MM}P{I|L}EK{I|L}{[MG]|[TS]} 5.0018;4.5857;4.3352;4.2986;3.8637;3.4204;3.2135;3.1971;2.5469;2.5103 +;-;-;-;-;-;-;-;-;- + 785 + 1 1.915 108855.5 0.5099999904632568 13784 5189 18967 HBL1_DMSO_200M_050219_2,18975 HBL1_DMSO_200M_050219_2,18975,GMPDFLEKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18977 102.58 71.0 1945300.0 25 0 46347.0 -1 0 117 872.4171467820075 3485.63948126163 4 873.1699706912041 MULTI CID FTMS 0 0 0 18976 553534.1875 0.0435626376299548 30 -0.8203277587890625 1 4 [YQ]{I|L} 3 -1 25.859 0.0 0.0 0.74186 0.0 0.0 0.0 3078.409780904461 3078.409780904461 14.62144052772942 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.3807196863200844 [YQ]{I|L} 0.74186 - 164 1 1.945 91247.2 1.0 13785 5190 18976 HBL1_DMSO_200M_050219_2,18977 HBL1_DMSO_200M_050219_2,18977, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18978 102.58 157.0 229230.0 25 0 16569.0 5968 DQRHWRPWRPD 11 94 774.8791625353398 0 774.9370605349541 PEAK CID FTMS 0 0 0 18976 71817.7265625 0.967242006813762 1 -0.08270263671875 2 Unmodified _DQRHWRPWRPD_ ENSG00000119720|ENST00000354366|NRDE2 1.1933415558491238 0.4761840153648598 4 S 1 11 6.9897 0.0 0.0 0.45161 0.0 0.0 1341.6379504595482 116.05125604801016 1457.6892065075583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.45161 - 8 + 1 1.945 32131.9 1.0 13786 5190 18976 HBL1_DMSO_200M_050219_2,18978 HBL1_DMSO_200M_050219_2,18978,DQRHWRPWRPD False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18979 102.58 69.0 2569000.0 25 0 124830.0 + 4370 DAVASLLIV 9 177 900.5401748138783 899.5328983472782 1 900.5412475466728 MULTI CID FTMS 0 0 0 18976 814580.6875 0.9515607057790052 -1 0.075592041015625 3 Unmodified _DAVASLLIV_ ENSG00000126264|ENST00000246551|HCST;nc|ENSG00000126264|Q9UBK5-2|HCST 46.020951573049366 0.0490941689151868 4 [{I|L}T]VQD{I|L}{I|L}V 8 5 + 68.205 0.0 0.0 7.5822 7.5822 81.719 0.0 0.0 0.0 2.3913645830596835 16.409780573583326 2.3913645830596835 2.3913645830596835 0 0.1595680409956017 2.0 1.2302046884880935 0.6505149978319906 [{I|L}T]VQD{I|L}{I|L}V;{[VA]|[{I|L}G]}DAS{I|L}{I|L}{I|L}V;{[DA]|[EG]}VAS{I|L}{I|L}{I|L}V;[{I|L}T]VQEV{I|L}V;[{I|L}T][DN]{I|L}{I|L}{I|L}V;[{I|L}T]VAGD{I|L}{I|L}V;[PS]TAS{I|L}{I|L}{I|L}V;[{I|L}T]VAGEV{I|L}V;{[DA]|[EG]}G{I|L}S{I|L}{I|L}{I|L}V;{[VA]|[{I|L}G]}ADS{I|L}{I|L}{I|L}V 7.5822;7.3164;7.2046;7.0313;7.0038;6.9099;6.4001;6.359;6.0096;6.0089 -;-;+;-;-;-;-;-;-;- + 3568 1 1.945 113496.6 1.0 13787 5190 18976 HBL1_DMSO_200M_050219_2,18979 HBL1_DMSO_200M_050219_2,18979,DAVASLLIV True True DAVASLLIV 102.58162 900.541247546673 8240136.5 18976.0 ENSG00000126264|ENST00000246551|HCST;;nc|ENSG00000126264|Q9UBK5-2|HCST 4.36807648340861 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18980 102.59 332.0 66826.0 25 0 2908.0 -1 0 66 1036.0587636040468 0 1035.843920886517 PEAK CID FTMS 0 0 0 18976 49324.90625 0.4649530377097543 1 -0.08270263671875 4 4 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.22241 0.0 0.0 1467.3047697844625 452.7016695611938 1920.006439345656 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.22241 - 3 + 1 1.945 24553.0 1.0 13788 5190 18976 HBL1_DMSO_200M_050219_2,18980 HBL1_DMSO_200M_050219_2,18980, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18981 102.6 800.0 404640.0 25 0 17072.0 + 45816 YYNYNWYWFTR 11 259 838.3665862966005 0 838.4165527224541 PEAK CID FTMS 0 0 0 18976 32417.12890625 0.3405913860446256 1 -0.08270263671875 5 Unmodified _YYNYNWYWFTR_ REV__ENSG00000106392|ENST00000436587|C1GALT1;REV__nc|ENSG00000106392|Q9NS00-2|C1GALT1 0.0 0.4761840153648598 4 {I|L}QGYY 5 -1 13.487 0.0 0.0 0.80534 0.0 0.0 931.359719281548 116.05130182437732 1047.411021105925 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}QGYY 0.80534 - 2118 + 1 1.945 203986.2 0.800000011920929 13789 5190 18976 HBL1_DMSO_200M_050219_2,18981 HBL1_DMSO_200M_050219_2,18981,YYNYNWYWFTR False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18982 102.61 212.0 396530.0 25 0 22796.0 -1 0 113 868.3909564121419 0 868.8517944216728 PEAK CID FTMS 0 0 0 -1 0 6 4 {M(Oxidation (M))|F}G 2 -1 5.0886 0.0 0.0 0.29333 0.0 0.0 1305.5683070119806 222.0889834039672 1527.6572904159475 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.29333 - 77 + 1 1.945 58052.9 1.0 13790 5190 18976 HBL1_DMSO_200M_050219_2,18982 HBL1_DMSO_200M_050219_2,18982, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18983 102.61 291.0 433500.0 25 0 5815.4 + 10828 FYYQYDKYIVW 11 104 794.3798494380696 0 794.3809692263603 PEAK CID FTMS 0 0 0 18976 165922.265625 1.0 0 0.0 7 Unmodified _FYYQYDKYIVW_ REV__ENSG00000260314|ENST00000569591|MRC1 0.3506318815782774 0.47618401536486 4 G 1 -1 6.9897 0.0 0.0 0.44051 0.0 0.0 1304.611492233758 222.0892275445922 1526.70071977835 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.44051 - 125 + 1 1.945 85841.8 1.0 13791 5190 18976 HBL1_DMSO_200M_050219_2,18983 HBL1_DMSO_200M_050219_2,18983,FYYQYDKYIVW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18984 102.61 204.0 123680.0 25 0 11087.0 -1 0 62 1166.940600574017 0 1166.940600574017 PEAK CID FTMS 0 0 0 -1 0 8 4 S 1 -1 5.4846 0.0 0.0 0.2352 0.0 0.0 1340.7193836658091 901.1156710260374 2241.8350546918464 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.2352 - 5 + 1 1.945 24812.5 1.0 13792 5190 18976 HBL1_DMSO_200M_050219_2,18984 HBL1_DMSO_200M_050219_2,18984, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18985 102.63 800.0 43031.0 25 0 5318.3 -1 0 76 727.0313598513603 0 727.0313598513603 PEAK CID FTMS 0 0 0 -1 0 9 4 D{M(Oxidation (M))|F} 2 -1 8.5835 0.0 0.0 0.59113 0.0 0.0 929.7962269275268 257.1304110162719 1186.9266379437988 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{M(Oxidation (M))|F} 0.59113 - 27 + 1 1.945 31003.0 0.9100000262260436 13793 5190 18976 HBL1_DMSO_200M_050219_2,18985 HBL1_DMSO_200M_050219_2,18985, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18986 102.63 144.0 373160.0 25 0 11922.0 + -1 WQWFMTWKSDW 11 106 808.8560668826103 0 808.8560668826103 PEAK CID FTMS 0 0 0 -1 0 10 Oxidation (M) _WQWFM(Oxidation (M))TWKSDW_ REV__ENST00000460933.5_1_3:133928664-133941275:-|nuORF 1.3295316138638542 0.4761840153648598 4 VA{I|L}V 4 -1 17.167 0.0 0.0 1.0625 0.0 0.0 924.2326282947143 306.18366419010005 1230.4162924848144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA{I|L}V 1.0625 - 37 + 1 1.945 41671.6 1.0 13794 5190 18976 HBL1_DMSO_200M_050219_2,18986 HBL1_DMSO_200M_050219_2,18986,WQWFMTWKSDW False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 18987 102.65 741.0 272510.0 25 0 15104.0 + 29349 QIYDIFQKL 9 139 584.324331767943 1166.634110602686 2 584.3248168826103 MULTI CID FTMS 0 0 0 18976 108323.3125 0.7759266484501036 -1 0.075592041015625 11 Unmodified _QIYDIFQKL_ ENSG00000161960|ENST00000293831|EIF4A1;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1 122.17920374332846 0.0007092405233684 4 [Q{I|L}]YD{I|L}{M(Oxidation (M))|F}QK{I|L} 9 0 [Q{I|L}] + + 63.182 22.76 9.4382 5.4158 5.4158 54.257 0.0 0.0 0.0 0.0 32.714722546680406 0.0 0.0 0 1.4005149978319906 0.0 0.3494850021680094 1.8550083952587293 + + [Q{I|L}]YD{I|L}{M(Oxidation (M))|F}QK{I|L} 5.4158 + + 2811 + 1 1.945 152286.7 1.0 13795 5190 18976 HBL1_DMSO_200M_050219_2,18987 HBL1_DMSO_200M_050219_2,18987,QIYDIFQKL True True QIYDIFQKL 102.64562 584.32481688261 1058279.0 18976.0 ENST00000577731.1_1_17:7478540-7480862:+|nuORF;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;ENST00000581544.5_1_17:7477924-7481249:+|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF 6.422497431437175 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18988 102.65 484.0 311060.0 25 0 27313.0 + 33187 SFFDNISSEL 10 126 579.7696343532979 1157.5247157733957 2 579.7699462771416 MULTI CID FTMS 0 0 0 18976 90810.9375 0.5423658270054676 -3 0.1511993408203125 12 Unmodified _SFFDNISSEL_ ENSG00000149657|ENST00000279068|LSM14B;nc|ENSG00000149657|Q9BX40-2|LSM14B 99.79894945604345 0.0086314121850342 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}DN{I|L}SES{I|L} 10 2 + 66.222 0.0 0.0 5.721 5.721 81.777 0.0 0.0 0.0 14.131806016604358 31.80880139214688 14.131806016604358 6.989700043360188 0 0.9859856381998782 2.0 1.024227503252014 0.8494850021680094 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}DN{I|L}SES{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}ND{I|L}SES{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}DGG{I|L}SES{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[DN]{M(Oxidation (M))|F}{I|L}SES{I|L};[YT]TNM{I|L}SSE{I|L};[YT]QSM{I|L}SSE{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GGD{I|L}SES{I|L};{[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}SN{I|L}SES{I|L};[YT]TS[RD]SSE{I|L};[DN]{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L}SES{I|L} 5.721;5.1171;4.1953;3.8201;3.6719;3.4768;3.3105;3.2698;3.224;3.1083 -;-;-;-;-;-;-;-;-;- 4060 1 1.945 113186.3 1.0 13796 5190 18976 HBL1_DMSO_200M_050219_2,18988 HBL1_DMSO_200M_050219_2,18988,SFFDNISSEL True True SFFDNISSEL 102.65419 579.769946277142 1481925.375 18976.0 nc|ENSG00000149657|Q9BX40-2|LSM14B;;ENSG00000149657|ENST00000279068|LSM14B 6.95230499903361 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18990 102.66 116.0 933380.0 25 0 153000.0 -1 0 82 372.2532934273788 742.4920339215575 2 372.2530395388603 MULTI CID FTMS 0 0 0 18989 482279.5625 0.5000736844124481 2 -0.0443801879882812 1 4 T 1 -1 18.979 0.0 0.0 2.5562 0.0 0.0 167.06070806186932 471.36053109467554 638.4212391565449 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 T 2.5562 - 9 + 1 1.947 91658.0 1.0 13797 5191 18989 HBL1_DMSO_200M_050219_2,18990 HBL1_DMSO_200M_050219_2,18990, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18991 102.67 305.0 213230.0 25 0 11559.0 -1 0 85 1163.2210883283276 3486.641435585183 3 1163.557788074017 MULTI CID FTMS 0 0 0 18989 179656.296875 1.0 0 0.0 2 4 HNV 3 -1 26.198 0.0 0.0 0.75138 0.0 0.0 0.0 3133.406329920386 3133.406329920386 3.802112417116064 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HNV 0.75138 - 61 + 1 1.947 46249.6 1.0 13798 5191 18989 HBL1_DMSO_200M_050219_2,18991 HBL1_DMSO_200M_050219_2,18991, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18993 102.67 82.0 1563100.0 25 0 167160.0 + 33769 SLAQYLINV 9 116 510.7899662534266 1019.5653795736532 2 510.7900878787041 MULTI CID FTMS 0 0 0 18992 677332.0625 0.8450640119255308 3 -0.0851058959960937 1 Unmodified _SLAQYLINV_ ENSG00000197111|ENST00000546463|PCBP2;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 59.36838082759317 0.0264317782606298 4 {I|L}S{I|L}MNV 6 5 61.386 0.0 0.0 6.0208 0.0 0.0 344.20646566836064 0.0 344.20646566836064 0.0 40.29364978517656 0.0 0.0 0 0.3807196863200844 0.0 0.8494850021680094 0.9698565171985376 {I|L}S{I|L}MNV 6.0208 - 1451 + 1 1.947 100468.9 1.0 13799 5192 18992 HBL1_DMSO_200M_050219_2,18993 HBL1_DMSO_200M_050219_2,18993,SLAQYLINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18994 102.68 355.0 306180.0 25 0 51269.0 + 31079 RILDIDIPMSV 11 54 636.3548005105314 1270.6950480878627 2 636.3547851443291 MULTI CID FTMS 0 0 0 18992 125306.359375 0.3655719302122718 -7 0.3312911987304687 2 Unmodified _RLLDLDIPMSV_ nc|ENSG00000135457|Q12800-2|TFCP2;ENSG00000135457|ENST00000257915|TFCP2;nc|ENSG00000135457|Q12800-4|TFCP2;nc|ENSG00000135457|Q12800-3|TFCP2 49.52724829834842 0.1202481389936634 4 {I|L}D{I|L}PMW 6 6 40.406 0.0 0.0 3.1798 0.0 0.0 497.2958937343133 0.0 497.2958937343133 0.0 9.960762528683702 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.0 {I|L}D{I|L}PMW 3.1798 - 82 1 1.947 86512.4 1.0 13800 5192 18992 HBL1_DMSO_200M_050219_2,18994 HBL1_DMSO_200M_050219_2,18994,RLLDLDIPMSV True True RILDIDIPMSV 102.67685 636.354785144329 6864206.5 18992.0 nc|ENSG00000135457|Q12800-2|TFCP2;;ENSG00000135457|ENST00000257915|TFCP2;;nc|ENSG00000135457|Q12800-4|TFCP2;;nc|ENSG00000135457|Q12800-3|TFCP2 6.815529187520345 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 18995 102.68 438.0 53483.0 25 0 1463.3 -1 0 67 1105.641894519329 0 1105.641894519329 PEAK CID FTMS 0 0 0 -1 0 3 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.947 21511.9 1.0 13801 5192 18992 HBL1_DMSO_200M_050219_2,18995 HBL1_DMSO_200M_050219_2,18995, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18996 102.7 800.0 185270.0 25 0 22550.0 -1 0 123 918.5668542141398 0 918.5233032107352 PEAK CID FTMS 0 0 0 -1 0 4 4 {I|L}TDT{I|L}{M(Oxidation (M))|F} 6 -1 30.861 0.0 0.0 1.6817 0.0 0.0 934.620450516367 207.1149386041625 1141.7353891205296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9436726795685342 0.0 {I|L}TDT{I|L}{M(Oxidation (M))|F} 1.6817 - 697 + 1 1.947 99111.9 0.4900000095367431 13802 5192 18992 HBL1_DMSO_200M_050219_2,18996 HBL1_DMSO_200M_050219_2,18996, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18998 102.71 350.0 32636.0 25 0 1934.2 -1 0 31 1065.211474597454 0 1065.211474597454 PEAK CID FTMS 0 0 0 -1 0 1 4 M 1 -1 6.9897 0.0 0.0 0.3284 0.0 0.0 1063.8337635486207 930.52399622135 1994.3577597699705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.3284 - 2 + 1 1.947 19272.9 1.0 13803 5193 18997 HBL1_DMSO_200M_050219_2,18998 HBL1_DMSO_200M_050219_2,18998, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 18999 102.72 695.0 69152.0 25 0 4057.0 -1 0 89 1018.324389636517 0 1018.324389636517 PEAK CID FTMS 0 0 0 -1 0 2 4 A 1 -1 5.4846 0.0 0.0 0.26956 0.0 0.0 1752.49703259159 208.07369409732652 1960.5707266889167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.26956 - 11 + 1 1.947 37759.9 1.0 13804 5193 18997 HBL1_DMSO_200M_050219_2,18999 HBL1_DMSO_200M_050219_2,18999, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19000 102.73 800.0 145720.0 25 0 8433.3 -1 0 100 1163.2228158019927 0 1162.895800769329 PEAK CID FTMS 0 0 0 -1 0 3 4 V{I|L}Y{I|L}AEV 7 -1 29.685 0.0 0.0 1.2771 0.0 0.0 1286.8378654741298 247.12066451682324 1533.9585299909531 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}Y{I|L}AEV 1.2771 - 120 + 1 1.947 77841.5 0.5199999809265137 13805 5193 18997 HBL1_DMSO_200M_050219_2,19000 HBL1_DMSO_200M_050219_2,19000, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19001 102.75 800.0 24910.0 25 0 1179.6 -1 0 58 1115.5273973670362 4458.080483601745 4 1116.637866199017 MULTI CID FTMS 0 0 0 18997 40293.6875 1.0 0 0.0 4 4 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.12302 0.0 0.0 4101.266348935533 206.7245272272094 4307.990876162742 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.12302 - 13 + 1 1.947 22157.4 0.4699999988079071 13806 5193 18997 HBL1_DMSO_200M_050219_2,19001 HBL1_DMSO_200M_050219_2,19001, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19004 102.76 224.0 562570.0 25 0 79791.0 + 11503 GILPMVPEV 9 86 954.5326045715154 953.5253281049154 1 954.5321533083916 MULTI CID FTMS 0 0 0 19003 298736.15625 0.6777975013070895 -8 0.3307266235351562 1 Unmodified _GILPMVPEV_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 81.86404211737425 0.017065112157077 4 {[VA]|[{I|L}G]}{I|L}PMVP{NN|[MP]|[D{I|L}]|[EV]} 9 0 + 60.088 0.0 0.0 6.3017 6.3017 88.836 0.0 0.0 0.0 4.170591192057103 4.170591192057103 4.170591192057103 12.230749808046326 0 2.322682509756042 1.3979400086720375 0.5189301784845296 0.0 + + {[VA]|[{I|L}G]}{I|L}PMVP{NN|[MP]|[D{I|L}]|[EV]};[TP]W{I|L}{I|L}P{NN|[MP]|[D{I|L}]|[EV]};{[VA]|[{I|L}G]}P{I|L}MVP{NN|[MP]|[D{I|L}]|[EV]};{[VA]|[{I|L}G]}{I|L}PVMP{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}AVP{NN|[MP]|[D{I|L}]|[EV]};{[VA]|[{I|L}G]}PM{I|L}VP{NN|[MP]|[D{I|L}]|[EV]};{[VA]|[{I|L}G]}[RN]AVP{NN|[MP]|[D{I|L}]|[EV]};{[VA]|[{I|L}G]}{I|L}VPMP{NN|[MP]|[D{I|L}]|[EV]};{[VA]|[{I|L}G]}V[NG]AVP{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}G{I|L}P{NN|[MP]|[D{I|L}]|[EV]} 6.3017;5.019;4.9226;4.7086;4.6959;4.6677;4.6363;4.6069;4.5053;4.4872 +;-;-;-;-;-;-;-;-;- + 487 + 1 1.947 87851.4 1.0 13807 5195 19003 HBL1_DMSO_200M_050219_2,19004 HBL1_DMSO_200M_050219_2,19004,GILPMVPEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19005 102.76 296.0 239600.0 25 0 7989.2 + 3250 AYGASFLSF 9 97 962.462578518781 961.455302052181 1 962.4608032107352 MULTI CID FTMS 0 0 0 19003 177042.6875 0.5902691380449778 -10 0.4163970947265625 2 Unmodified _AYGASFLSF_ ENSG00000159596|ENST00000372025|TMEM69 104.79918948944588 0.0084531067040494 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GAS{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F} 9 0 + 91.547 0.0 0.0 9.5218 9.5218 87.647 0.0 0.0 0.0 23.75853508964032 52.32300462445747 23.75853508964032 4.163617425480879 0 1.2803695511246984 1.5228787452803376 2.094187677400525 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GAS{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GSA{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QS{M(Oxidation (M))|F}{I|L}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA{I|L}AYS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GAS{I|L}{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA{I|L}YAS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GAAY{I|L}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}AGAYS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}QAYS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GA{I|L}S{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 9.5218;9.0887;8.848;8.397;8.2747;8.2715;8.2277;8.0408;7.996;7.9451 +;-;-;-;-;-;-;-;-;- + 3417 1 1.947 53638.2 1.0 13808 5195 19003 HBL1_DMSO_200M_050219_2,19005 HBL1_DMSO_200M_050219_2,19005,AYGASFLSF True True AYGASFLSF 102.76301 962.460803210735 3749880.5 19003.0 ENSG00000159596|ENST00000372025|TMEM69 7.332120895385742 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19007 102.77 416.0 45044.0 25 0 1813.2 -1 0 56 1171.6498154321623 0 1172.035327136517 PEAK CID FTMS 0 0 0 19006 47315.64453125 0.9011839901673908 -1 0.012115478515625 1 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.947 17863.9 1.0 13809 5196 19006 HBL1_DMSO_200M_050219_2,19007 HBL1_DMSO_200M_050219_2,19007, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19008 102.79 800.0 173050.0 25 0 6638.3 + 29264 QHNQAQSSKM 10 117 1158.5309883472005 1157.5237118806003 1 1159.530566394329 MULTI CID FTMS 0 0 0 19006 171373.5625 1.0 0 0.0 2 Unmodified _QHNQAQSSKM_ REV__ENST00000476560.1_1_7:143951695-144052226:-|nuORF 18.1463463914782 0.5430639438673815 4 [YQ]{M(Oxidation (M))|F}[DG]PSSQ 9 -1 26.753 0.0 0.0 2.3112 0.0 0.0 0.0 145.0883178516107 145.0883178516107 6.629464400249376 0.0 0.0 0.0 0 0.0 0.0 1.1936726795685342 0.8494850021680094 [YQ]{M(Oxidation (M))|F}[DG]PSSQ 2.3112 - 3867 1 1.947 86351.9 0.6000000238418579 13810 5196 19006 HBL1_DMSO_200M_050219_2,19008 HBL1_DMSO_200M_050219_2,19008,QHNQAQSSKM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19009 102.8 635.0 204430.0 25 0 5773.6 + 39518 VATWMLEV 8 130 948.485130064165 947.477853597565 1 948.4888793826104 MULTI CID FTMS 0 0 0 19006 113329.296875 0.0114114955520769 18 -0.57427978515625 3 Unmodified _VATWMLEV_ ENSG00000110092|ENST00000227507|CCND1;ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2 85.35673624503755 0.0684052510377227 4 {[WT]|[RM]}AMV{I|L}EV 8 4 + 82.229 0.0 0.0 8.6787 8.6787 80.871 0.0 0.0 0.0 8.821675760895943 14.9046305952634 8.821675760895943 0.8804562952784067 0 0.6505149978319906 1.0969100130080565 2.2638793319624577 0.0 {[WT]|[RM]}AMV{I|L}EV;{[WT]|[RM]}MAV{I|L}EV;{[WT]|[RM]}AVM{I|L}EV;{[WT]|[RM]}M{I|L}G{I|L}EV;{[WT]|[RM]}AM{I|L}VEV;[{I|L}T]GWM{I|L}EV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NMV{I|L}EV;[WM]TAV{I|L}EV;{[WT]|[RM]}MA{I|L}VEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NVM{I|L}EV 8.6787;8.5857;8.5433;7.9384;7.7524;7.7476;7.7114;7.6724;7.6595;7.5761 -;-;-;-;-;-;-;-;-;- 5496 1 1.947 86495.8 1.0 13811 5196 19006 HBL1_DMSO_200M_050219_2,19009 HBL1_DMSO_200M_050219_2,19009,VATWMLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19010 102.81 531.0 50783.0 25 0 9482.2 -1 0 57 938.5607313558102 0 938.1624023318292 PEAK CID FTMS 0 0 0 -1 0 4 4 V 1 -1 6.9897 0.0 0.0 0.37276 0.0 0.0 1408.8518571434577 364.1636141412719 1773.0154712847295 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.37276 - 3 + 1 1.947 27109.8 1.0 13812 5196 19006 HBL1_DMSO_200M_050219_2,19010 HBL1_DMSO_200M_050219_2,19010, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19012 102.82 800.0 263730.0 25 0 47301.0 -1 VPEMIPPTL 9 88 506.7735436918545 1011.532534450509 2 506.7734557986259 MULTI CID FTMS 0 0 0 19011 62264.1171875 0.3969521603785332 -2 0.056243896484375 1 Oxidation (M) _VPEM(Oxidation (M))IPPTL_ ENSG00000274523|ENST00000610322|RCC1L;ENST00000420642.1_7:74765936-74789271:+|nuORF;nc|ENSG00000274523|Q96I51-3|RCC1L 16.942295170755138 0.3780752226737986 4 [VP]YY[KT]E{I|L} 8 -1 + 26.343 0.0 0.0 2.6043 2.6043 77.114 0.0 0.0 0.0 0.1452280640859982 6.957640437841874 0.1452280640859982 14.97084322601324 0 0.6677353201839438 1.3010299956639813 0.0 0.0 [VP]YY[KT]E{I|L};[VP]YY[KT]G[KG] 2.6043;1.1243 -;- 134 1 1.947 166008.2 0.9900000095367432 13813 5197 19011 HBL1_DMSO_200M_050219_2,19012 HBL1_DMSO_200M_050219_2,19012,VPEMIPPTL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19013 102.83 213.0 553820.0 25 0 352970.0 + 24002 LVWICLHI 8 28 996.5738308168468 995.5665543502466 1 996.5760986208916 MULTI CID FTMS 0 0 0 19011 229863.484375 0.6824275654429424 -5 0.1413497924804687 2 Unmodified _LVWICLHI_ REV__ENSG00000164935|ENST00000297581|DCSTAMP 2.889219685676258 0.8067950007271085 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.947 86716.6 1.0 13814 5197 19011 HBL1_DMSO_200M_050219_2,19013 HBL1_DMSO_200M_050219_2,19013,LVWICLHI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19014 102.84 655.0 55693.0 25 0 8861.7 -1 0 85 1039.006325393893 0 1039.002368152142 PEAK CID FTMS 0 0 0 19011 108725.8984375 1.0 0 0.0 3 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.33669 0.0 0.0 1742.8279451219666 183.0781191461547 1925.906064268121 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.33669 - 62 + 1 1.947 31806.9 1.0 13815 5197 19011 HBL1_DMSO_200M_050219_2,19014 HBL1_DMSO_200M_050219_2,19014, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19016 102.85 371.0 491780.0 25 0 27062.0 -1 0 141 872.4171467820075 3485.63948126163 4 872.9177734255791 MULTI CID FTMS 0 0 0 19015 364271.09375 0.0217944765404497 38 -0.7085647583007812 1 4 {I|L}HNED 5 -1 40.261 0.0 0.0 1.155 0.0 0.0 290.1132427971659 2584.1683818105857 2874.281624607752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.4247425010840047 {I|L}HNED 1.155 - 571 + 1 1.947 126300.2 1.0 13816 5198 19015 HBL1_DMSO_200M_050219_2,19016 HBL1_DMSO_200M_050219_2,19016, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19017 102.86 598.0 239430.0 25 0 25293.0 + 33484 SIIEQLDPVSF 11 117 624.329415345648 1246.644277758096 2 624.3300659060478 MULTI CID FTMS 0 0 0 19015 139791.546875 0.8627565055400008 -2 0.0771408081054687 2 Unmodified _SIIEQLDPVSF_ ENSG00000162959|ENST00000404530|MEMO1;ENST00000441868.2_1_6:135219409-135219799:+|nuORF;nc|ENSG00000162959|Q9Y316-2|MEMO1;nc|ENSG00000162959|Q9Y316-3|MEMO1 93.93812099017352 0.00052454058588 4 {[TV]|[{I|L}S]}{I|L}EQ{I|L}DPVS{M(Oxidation (M))|F} 11 0 + 86.992 0.0 0.0 6.9781 6.9781 81.726 0.0 0.0 0.0 3.037951551073391 11.302663821573477 3.037951551073391 3.037951551073391 0 1.742992819099939 1.6989700043360187 1.916386562212268 0.0 + + {[TV]|[{I|L}S]}{I|L}EQ{I|L}DPVS{M(Oxidation (M))|F};[VP]SS{I|L}S{I|L}DPVS{M(Oxidation (M))|F};[VP]SSD{I|L}PVS{I|L}S{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{I|L}E[AG]{I|L}DPVS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}Q{I|L}S{I|L}DPVS{M(Oxidation (M))|F};[VP]SS{I|L}{I|L}SDPVS{M(Oxidation (M))|F};[VP]S{I|L}SS{I|L}DPVS{M(Oxidation (M))|F};[VP]SSD{I|L}{I|L}SPVS{M(Oxidation (M))|F};[VP]SS{I|L}DPVS{I|L}S{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}QD{I|L}PVS{I|L}S{M(Oxidation (M))|F} 6.9781;6.7344;6.3071;6.2458;6.0046;5.9461;5.9439;5.8273;5.8206;5.8089 +;-;-;-;-;-;-;-;-;- + 11136 1 1.947 110007.3 1.0 13817 5198 19015 HBL1_DMSO_200M_050219_2,19017 HBL1_DMSO_200M_050219_2,19017,SIIEQLDPVSF True True SIIEQLDPVSF 102.8597 624.330065906048 1161347.5 19015.0 ENSG00000162959|ENST00000404530|MEMO1;;nc|ENSG00000162959|Q9Y316-2|MEMO1;;nc|ENSG00000162959|Q9Y316-3|MEMO1;;ENST00000441868.2_1_6:135219409-135219799:+|nuORF 6.58003044128418 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19018 102.87 800.0 352470.0 25 0 27347.0 + 1228 AIIKLVMEI 9 149 515.3209782334542 1028.6274035337085 2 515.3216430544853 MULTI CID FTMS 0 0 0 19015 94145.515625 0.2953745232829312 -6 0.1743621826171875 3 Unmodified _AIIKLVMEI_ REV__ENSG00000102001|ENST00000323022|CACNA1F;REV__nc|ENSG00000102001|O60840-4|CACNA1F;REV__nc|ENSG00000102001|O60840-5|CACNA1F;REV__nc|ENSG00000102001|O60840-6|CACNA1F;REV__nc|ENSG00000102001|O60840-7|CACNA1F;REV__nc|ENSG00000102001|O60840|CACNA1F 48.345845343767074 0.0439967357579942 4 [{I|L}A]PV{M(Oxidation (M))|F}{I|L}EK{I|L} 9 -1 + 71.353 0.0 0.0 6.9367 6.9367 79.236 0.0 0.0 0.0 16.237125054200234 12.587418566968154 12.587418566968154 1.945830421822663 0 0.3252574989159953 2.0 0.9361818737241734 0.4916440611282626 [{I|L}A]PV{M(Oxidation (M))|F}{I|L}EK{I|L};[{I|L}A]PV{I|L}{M(Oxidation (M))|F}EK{I|L};[{I|L}A]PV{M(Oxidation (M))|F}{I|L}KE{I|L};[{I|L}A]PV{I|L}{M(Oxidation (M))|F}KE{I|L};[{I|L}A]{I|L}[VP]{M(Oxidation (M))|F}EK{I|L};[{I|L}A]{I|L}T{I|L}TRE{I|L};[{I|L}A]{I|L}[VP]{M(Oxidation (M))|F}KE{I|L};[{I|L}A]{I|L}TEKKN{I|L};[{I|L}A]{I|L}T{I|L}K[SG]N{I|L};[{I|L}A]{I|L}TEKKQV 6.9367;6.7476;6.4301;6.2409;5.5639;5.3655;5.0573;4.5392;4.2547;4.0103 -;-;-;-;-;-;-;-;-;- 2457 + 1 1.947 221950.8 0.9399999976158142 13818 5198 19015 HBL1_DMSO_200M_050219_2,19018 HBL1_DMSO_200M_050219_2,19018,AIIKLVMEI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19021 102.89 800.0 22151.0 25 0 3521.7 -1 0 37 1053.169726550579 0 1053.169726550579 PEAK CID FTMS 0 0 0 -1 0 1 4 T{I|L}YG 4 -1 13.276 0.0 0.0 0.6309 0.0 0.0 1393.961510130652 273.1254976861938 1667.0870078168457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 T{I|L}YG 0.6309 - 83 + 1 1.947 21445.6 0.6299999952316284 13819 5200 19020 HBL1_DMSO_200M_050219_2,19021 HBL1_DMSO_200M_050219_2,19021, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19022 102.9 171.0 188470.0 25 0 19202.0 + 32524 SALPWNITV 9 47 1000.545450629784 999.5381741631838 1 1000.545397937298 MULTI CID FTMS 0 0 0 19020 197759.71875 0.1064336912679888 11 -0.4342880249023437 2 Unmodified _SALPWNITV_ ENSG00000057663|ENST00000369076|ATG5;nc|ENSG00000057663|Q9H1Y0-2|ATG5 41.8396318013385 0.0653578398400075 4 [WP]N{I|L}TG{I|L}{[TV]|[{I|L}S]} 9 6 + 71.137 0.0 0.0 7.117 7.117 91.149 0.0 0.0 0.0 22.37643016799588 60.67918449261214 22.37643016799588 10.255762612236907 0 0.0 1.5228787452803376 1.1237125054200234 0.8807196863200843 [WP]N{I|L}TG{I|L}{[TV]|[{I|L}S]};[WP]N{I|L}TVA{[TV]|[{I|L}S]};[WP]GG{I|L}TG{I|L}{[TV]|[{I|L}S]};[WP][KA]EG{I|L}{[TV]|[{I|L}S]};[WP]GG{I|L}TVA{[TV]|[{I|L}S]};[WP][KA]EVA{[TV]|[{I|L}S]};{[QV]|[N{I|L}]|[RA]|[KV]}[WP]TG{I|L}{[TV]|[{I|L}S]};{[QV]|[N{I|L}]|[RA]|[KV]}[WP]TVA{[TV]|[{I|L}S]};[WP][KA][{M(Oxidation (M))|F}V][RP];[HV][RP]{I|L}N[HQ] 7.117;6.0909;5.3146;5.241;4.7888;4.215;3.7175;2.6914;1.9648;1.3651 -;-;-;-;-;-;-;-;-;- 168 1 1.947 32592.5 1.0 13820 5200 19020 HBL1_DMSO_200M_050219_2,19022 HBL1_DMSO_200M_050219_2,19022,SALPWNITV True True SALPWNITV 102.89673 1000.5453979373 15373898.0 19020.0 nc|ENSG00000057663|Q9H1Y0-2|ATG5;;ENSG00000057663|ENST00000369076|ATG5 3.1901842753092446 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19023 102.91 800.0 269790.0 25 0 12059.0 + 45208 YQVEGMEWL 9 129 1154.5223039482412 1153.5150274816413 1 1154.527514636517 MULTI CID FTMS 0 0 0 19020 126427.4375 0.4688884119017662 6 -0.2087554931640625 3 Unmodified _YQVEGMEWL_ chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS;ENST00000466552.1_1_10:96331150-96333962:+|nuORF;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS;nc|ENSG00000119969|Q9NRZ9-7|HELLS;nc|ENSG00000119969|Q9NRZ9-8|HELLS 142.0795815696625 0.0276347534122716 4 [YQ]VEGMESV{I|L} 10 2 + 100.61 0.0 0.0 8.722 8.722 89.324 0.0 0.0 0.0 11.320684442917653 16.532125137753454 11.320684442917653 6.148933515261646 0 1.8338395061109685 0.0 1.0941876774005248 1.319341519366547 [YQ]VEGMESV{I|L};[YQ]VEGMEGE{I|L};[YQ]VEGMEW{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEGMESV{I|L};[YQ]VEGMTDV{I|L};[YQ]EVGMESV{I|L};[YQ]VEGEMSV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEGMEGE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEGMEW{I|L};[YQ]V[DC]VESV{I|L} 8.722;8.189;8.1557;7.7406;7.4033;7.3972;7.2218;7.2075;7.1743;6.9971 -;-;+;-;-;-;-;-;-;- + 32519 1 1.947 136681.4 0.75 13821 5200 19020 HBL1_DMSO_200M_050219_2,19023 HBL1_DMSO_200M_050219_2,19023,YQVEGMEWL True True YQVEGMEWL 102.9106 1154.52751463652 2829700.5 19020.0 chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;;nc|ENSG00000119969|Q9NRZ9-5|HELLS;;nc|ENSG00000119969|Q9NRZ9-2|HELLS;;nc|ENSG00000119969|Q9NRZ9-3|HELLS;;nc|ENSG00000119969|Q9NRZ9-6|HELLS;;nc|ENSG00000119969|Q9NRZ9-7|HELLS;;ENST00000466552.1_1_10:96331150-96333962:+|nuORF;;ENSG00000119969|ENST00000348459|HELLS;;nc|ENSG00000119969|Q9NRZ9-4|HELLS;;nc|ENSG00000119969|Q9NRZ9-8|HELLS 10.361542383829752 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19025 102.93 800.0 144790.0 25 0 16543.0 + 41846 VPYIGIVTI 9 107 487.799873101587 973.585193269974 2 487.7991821169853 MULTI CID FTMS 0 0 0 19024 69582.46875 0.4834256050855847 -1 0.0334243774414062 1 Unmodified _VPYIGIVTI_ ENSG00000140612|ENST00000268220|SEC11A;ENST00000558924.1_1_15:85213252-85214072:-|nuORF;ENST00000560266.5_1_15:85213252-85223982:-|nuORF;ENST00000560409.5_1_15:85213252-85222467:-|nuORF;nc|ENSG00000140612|P67812-2|SEC11A 52.69307289633392 0.0344652456970635 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{I|L}VVT{I|L} 9 2 + 60.067 0.0 0.0 6.1696 6.1696 78.29 0.0 0.0 0.0 8.45098040014257 8.182503180159344 8.182503180159344 3.0102999566398125 0 0.8182503180159344 1.3010299956639813 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{I|L}VVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA{I|L}VVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GV{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VAVVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAV{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}AVVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VG{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{I|L}V[{I|L}T]V;[VP]YA{I|L}VVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GVV{I|L}T{I|L} 6.1696;5.8604;5.8604;5.6796;5.5513;5.3704;5.3704;5.3292;5.3016;5.2421 -;-;-;-;-;-;-;-;-;- 2257 1 1.947 94039.0 0.3400000035762787 13822 5201 19024 HBL1_DMSO_200M_050219_2,19025 HBL1_DMSO_200M_050219_2,19025,VPYIGIVTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19026 102.94 800.0 268660.0 25 0 7479.4 -1 0 163 831.3838223975222 2491.1296377927665 3 831.3838378787041 MULTI CID FTMS 0 0 0 19024 95795.15625 0.8015586942111808 -4 0.1033859252929687 2 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 63.822 0.0 0.0 2.562 0.0 0.0 0.0 1450.5121810879416 1450.5121810879416 44.56775092321093 0.0 0.0 0.0 0 1.0 1.2218487496163564 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.562 - 7453 1 1.947 143665.5 0.699999988079071 13823 5201 19024 HBL1_DMSO_200M_050219_2,19026 HBL1_DMSO_200M_050219_2,19026, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19027 102.96 800.0 301970.0 25 0 36029.0 + 45210 YQVEGMEWLRM 11 98 721.3333021657854 1440.6520513983708 2 721.3333618044853 MULTI CID FTMS 0 0 0 19024 90319.40625 0.3800981367278104 -5 0.1475143432617187 3 Unmodified _YQVEGMEWLRM_ chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS;nc|ENSG00000119969|Q9NRZ9-7|HELLS;nc|ENSG00000119969|Q9NRZ9-8|HELLS 94.90867108109512 0.0004917860609384 4 YQVEMGEW{I|L}{[WT]|[RM]} 11 2 + 114.17 0.0 0.0 7.925 7.925 80.219 0.0 0.0 0.0 21.32576888900239 8.947247322961758 8.947247322961758 1.2371250542002343 0 1.6171302707394362 1.3979400086720375 1.274227503252014 1.610924374808178 YQVEMGEW{I|L}{[WT]|[RM]};YQVEGMEW{I|L}{[WT]|[RM]};YQVMEGEW{I|L}{[WT]|[RM]};YQVEMWW{I|L}{[WT]|[RM]};YQVEMGEMKV{NN|[MP]|[D{I|L}]|[EV]};YQVEGMEMKV{NN|[MP]|[D{I|L}]|[EV]};YQVMEWW{I|L}{[WT]|[RM]};YQVMWEW{I|L}{[WT]|[RM]};YQVWMEW{I|L}{[WT]|[RM]};YQVMEGEMKV{NN|[MP]|[D{I|L}]|[EV]} 7.925;7.8391;7.6638;7.4686;7.3039;7.2181;7.2074;7.1215;7.0879;7.0428 -;+;-;-;-;-;-;-;-;- + 6645 + 1 1.947 170840.9 0.9900000095367432 13824 5201 19024 HBL1_DMSO_200M_050219_2,19027 HBL1_DMSO_200M_050219_2,19027,YQVEGMEWLRM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19029 102.96 262.0 619600.0 25 0 108330.0 + 31080 RLLDLDIPMSV 11 71 636.3548005105314 1270.6950480878627 2 636.3547851443291 MULTI CID FTMS 0 0 0 19028 231941.609375 0.6766722954739065 3 -0.076873779296875 1 Unmodified _RLLDLDIPMSV_ ENSG00000153560|ENST00000283629|UBP1;nc|ENSG00000153560|Q9NZI7-4|UBP1 75.5705956163825 0.0162609445057862 4 D{I|L}D{I|L}PMSV 8 3 63.849 0.0 0.0 5.0248 0.0 0.0 382.2692433087906 0.0 382.2692433087906 0.0 30.010842755546136 0.0 0.0 0 1.6989700043360187 0.0 1.2614393726401687 0.0 + D{I|L}D{I|L}PMSV 5.0248 + + 120 1 1.947 123075.6 1.0 13825 5202 19028 HBL1_DMSO_200M_050219_2,19029 HBL1_DMSO_200M_050219_2,19029,RLLDLDIPMSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19030 102.98 798.0 186990.0 25 0 25352.0 + 33770 SLAQYLINV 9 124 510.7899662534266 1019.5653795736532 2 510.7901489138603 MULTI CID FTMS 0 0 0 19028 58247.34765625 0.0726715004642376 13 -0.4118576049804687 2 Unmodified _SLAQYLINV_ ENSG00000197111|ENST00000546463|PCBP2;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;ENST00000547048.5_1_12:53862529-53873223:+|nuORF;nc|ENSG00000197111|Q15366-2|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366|PCBP2 51.41523569358685 0.0372669606867193 4 {I|L}S{I|L}MNV 6 5 53.321 0.0 0.0 5.2297 0.0 0.0 344.2049862262816 0.0 344.2049862262816 0.0 35.56093158795967 0.0 0.0 0 0.3054621874040891 0.0 0.805462187404089 0.6549471895720985 {I|L}S{I|L}MNV 5.2297 - 1899 + 1 1.947 113645.5 1.0 13826 5202 19028 HBL1_DMSO_200M_050219_2,19030 HBL1_DMSO_200M_050219_2,19030,SLAQYLINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19032 102.99 669.0 45375.0 25 0 4499.8 -1 0 76 1023.07042235136 0 1023.07042235136 PEAK CID FTMS 0 0 0 -1 0 1 4 TY{I|L} 3 -1 12.703 0.0 0.0 0.62144 0.0 0.0 1367.7614368884635 296.1617525690063 1663.9231894574698 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TY{I|L} 0.62144 - 32 + 1 1.947 31448.5 1.0 13827 5203 19031 HBL1_DMSO_200M_050219_2,19032 HBL1_DMSO_200M_050219_2,19032, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19033 103.0 517.0 165850.0 25 0 8471.0 -1 0 110 1158.54565651872 3472.61514015636 3 1158.880908191204 MULTI CID FTMS 0 0 0 19031 111736.4375 1.0 0 0.0 2 4 VQY{M(Oxidation (M))|F}ANQQAED 11 -1 49.176 0.0 0.0 1.4161 0.0 0.0 1842.8986300580152 333.13141809635005 2176.030048154365 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VQY{M(Oxidation (M))|F}ANQQAED 1.4161 - 1608 + 1 1.947 56923.2 1.0 13828 5203 19031 HBL1_DMSO_200M_050219_2,19033 HBL1_DMSO_200M_050219_2,19033, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19034 103.02 800.0 17155.0 25 0 1171.7 -1 0 33 1195.315844714642 0 1195.315844714642 PEAK CID FTMS 0 0 0 -1 0 3 4 C(Carbamidomethyl (C)) 1 -1 5.4846 0.0 0.0 0.22961 0.0 0.0 812.3141102283092 1413.2589815729127 2225.573091801222 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.22961 - 1 + 1 1.947 18574.0 0.5 13829 5203 19031 HBL1_DMSO_200M_050219_2,19034 HBL1_DMSO_200M_050219_2,19034, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19035 103.03 800.0 278250.0 25 0 28932.0 + 17108 KLFNEFIQL 9 152 576.3267327065596 1150.638912479919 2 576.3268920779228 MULTI CID FTMS 0 0 0 19031 78184.8671875 0.4838593063037947 -4 0.103118896484375 4 Unmodified _KLFNEFIQL_ ENSG00000065183|ENST00000349139|WDR3 88.95385435242217 0.0153473310052057 4 [AG]D{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}{I|L}Q{I|L} 10 5 + 89.134 0.0 0.0 7.7464 7.7464 82.702 0.0 0.0 0.0 2.7754889981445814 16.53212513775344 2.7754889981445814 2.7754889981445814 0 0.7059771852360797 1.5228787452803376 1.1936726795685342 1.6549471895720984 [AG]D{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}{I|L}Q{I|L};[Q{I|L}]{M(Oxidation (M))|F}DK{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]{I|L}{M(Oxidation (M))|F}DK{M(Oxidation (M))|F}{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L}E{M(Oxidation (M))|F}{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}NK{M(Oxidation (M))|F}{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}{I|L}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}{I|L}Q{I|L};[AG]D{M(Oxidation (M))|F}{I|L}K{M(Oxidation (M))|F}{I|L}[AG]{I|L};[AG]D{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}K{I|L}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}K{I|L}Q{I|L} 7.7464;7.5052;7.4776;7.198;7.0905;6.9946;6.9666;6.95;6.9416;6.7481 -;-;-;-;-;-;-;-;-;- 5533 1 1.947 165870.7 0.9900000095367432 13830 5203 19031 HBL1_DMSO_200M_050219_2,19035 HBL1_DMSO_200M_050219_2,19035,KLFNEFIQL True True KLFNEFIQL 103.02885 576.326892077923 1242952.5 19031.0 ENSG00000065183|ENST00000349139|WDR3 5.4397304852803545 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19038 103.05 800.0 308910.0 25 0 40658.0 + 21338 LPFEPVPVI 9 107 505.799944738174 1009.585336543148 2 505.7992126345634 MULTI CID FTMS 0 0 0 19037 76717.4375 0.3381686072780088 -5 0.1554412841796875 1 Unmodified _LPFEPVPVI_ ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1 60.38955033654506 0.025866396858536 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}PVPV{I|L} 9 2 + 71.027 0.0 0.0 7.0353 7.0353 83.654 0.0 0.0 0.0 13.194313196178555 14.973024840566469 13.194313196178555 4.259687322722812 0 1.1549471895720984 1.154901959985743 0.5866968715561641 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}PVPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EP{I|L}VPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EPV{I|L}PV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EPVPV{I|L};[{I|L}P]{M(Oxidation (M))|F}EPVPV{I|L};[{I|L}P]ME{I|L}VPV{I|L};[{I|L}P]MEV{I|L}PV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[DP]{I|L}PV{I|L};[{M(Oxidation (M))|F}E]P{I|L}PVPV{I|L};[{I|L}P]{M(Oxidation (M))|F}[DP]{I|L}PV{I|L} 7.0353;6.6133;6.5628;6.1407;5.7284;5.2104;5.1599;5.0037;4.94;4.5913 -;-;-;-;+;-;-;-;-;- + 1251 1 1.947 188935.3 0.5099999904632568 13831 5205 19037 HBL1_DMSO_200M_050219_2,19038 HBL1_DMSO_200M_050219_2,19038,LPFEPVPVI True True LPFEPVPVI 103.04875 505.799212634563 4978970.5 19037.0 nc|ENSG00000133706|Q9P2J5-2|LARS1;;ENSG00000133706|ENST00000394434|LARS1 2.848307609558105 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19039 103.05 149.0 86694.0 25 0 6018.7 -1 0 37 1105.120288074017 0 1105.120288074017 PEAK CID FTMS 0 0 0 -1 0 2 4 C 1 -1 5.4846 0.0 0.0 0.24837 0.0 0.0 1331.8562244861216 770.3577974908811 2102.214021977002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.24837 - 2 + 1 1.947 20874.1 1.0 13832 5205 19037 HBL1_DMSO_200M_050219_2,19039 HBL1_DMSO_200M_050219_2,19039, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19040 103.06 239.0 152870.0 25 0 31469.0 -1 0 57 971.5633943967164 0 971.563037097454 PEAK CID FTMS 0 0 0 19037 133998.140625 1.0 0 0.0 3 4 N{I|L} 2 -1 7.9588 0.0 0.0 0.41001 0.0 0.0 1100.6243341041766 610.3273263941932 1710.9516604983696 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N{I|L} 0.41001 - 81 + 1 1.947 34671.0 1.0 13833 5205 19037 HBL1_DMSO_200M_050219_2,19040 HBL1_DMSO_200M_050219_2,19040, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19041 103.06 192.0 473920.0 25 0 47319.0 + 43421 WRLWHWYQRRL 11 136 850.4567097532084 0 850.4587280154228 PEAK CID FTMS 0 0 0 19037 116943.25 0.8383997791859453 -1 0.0038223266601562 4 Unmodified _WRLWHWYQRRL_ REV__ENST00000513055.1_1_5:92921088-92921313:-|nuORF 0.0 0.4761840153648598 4 Q{I|L}{I|L}D 4 -1 14.945 0.0 0.0 0.87967 0.0 0.0 1015.560745090598 211.07375513248283 1226.634500223081 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 Q{I|L}{I|L}D 0.87967 - 167 + 1 1.947 63038.6 1.0 13834 5205 19037 HBL1_DMSO_200M_050219_2,19041 HBL1_DMSO_200M_050219_2,19041,WRLWHWYQRRL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19042 103.07 270.0 336490.0 25 0 15723.0 -1 0 151 875.9878681196182 0 876.0961791872978 PEAK CID FTMS 0 0 0 19037 35632.1015625 1.0 0 0.0 5 4 Y{M(Oxidation (M))|F} 2 -1 6.4537 0.0 0.0 0.36879 0.0 0.0 1304.764815973808 132.04602991275627 1436.8108458865645 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.36879 - 90 + 1 1.947 61692.9 1.0 13835 5205 19037 HBL1_DMSO_200M_050219_2,19042 HBL1_DMSO_200M_050219_2,19042, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19043 103.08 800.0 299250.0 25 0 13832.0 -1 0 226 835.9845738687253 0 836.0070678591728 PEAK CID FTMS 0 0 0 -1 0 6 4 QGY{M(Oxidation (M))|F} 4 -1 6.8867 0.0 0.0 0.41239 0.0 0.0 1039.6771422669442 132.04609094791252 1171.7232332148567 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QGY{M(Oxidation (M))|F} 0.41239 - 625 + 1 1.947 150188.2 0.5799999833106995 13836 5205 19037 HBL1_DMSO_200M_050219_2,19043 HBL1_DMSO_200M_050219_2,19043, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19044 103.09 399.0 415350.0 25 0 4927.7 -1 0 143 869.9843277048717 0 869.9551269412041 PEAK CID FTMS 0 0 0 -1 0 7 4 QGPQ 4 -1 9.7526 0.0 0.0 0.56116 0.0 0.0 1107.6757344118932 217.06296716861564 1324.7387015805089 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 QGPQ 0.56116 - 490 + 1 1.947 104831.6 1.0 13837 5205 19037 HBL1_DMSO_200M_050219_2,19044 HBL1_DMSO_200M_050219_2,19044, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19046 103.1 431.0 52420.0 25 0 1943.1 -1 0 54 1133.822070300579 0 1133.822070300579 PEAK CID FTMS 0 0 0 -1 0 1 4 M 1 -1 6.9897 0.0 0.0 0.30851 0.0 0.0 1819.4315418689328 312.1367586725219 2131.568300541456 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.30851 - 6 + 1 1.945 21209.3 1.0 13838 5206 19045 HBL1_DMSO_200M_050219_2,19046 HBL1_DMSO_200M_050219_2,19046, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19047 103.11 800.0 33421.0 25 0 3401.2 -1 0 66 1097.160040480035 0 1097.250659167767 PEAK CID FTMS 0 0 0 19045 39974.3359375 0.4876984858487122 1 -0.0528717041015625 2 4 {M(Oxidation (M))|F}Y 2 -1 8.5835 0.0 0.0 0.39153 0.0 0.0 1297.869200977845 581.2813814752561 1879.150582453101 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.39153 - 48 + 1 1.945 25673.6 0.550000011920929 13839 5206 19045 HBL1_DMSO_200M_050219_2,19047 HBL1_DMSO_200M_050219_2,19047, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19048 103.13 798.0 39818.0 25 0 7712.4 -1 0 68 1014.4797352086622 0 1014.604296863079 PEAK CID FTMS 0 0 0 -1 0 3 4 C(Carbamidomethyl (C)) 1 -1 6.9897 0.0 0.0 0.34484 0.0 0.0 1341.5611417046305 522.321631385572 1863.8827730902024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.34484 - 27 + 1 1.945 31254.6 1.0 13840 5206 19045 HBL1_DMSO_200M_050219_2,19048 HBL1_DMSO_200M_050219_2,19048, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19049 103.14 800.0 167170.0 25 0 15513.0 + 13371 HLIDFMSEI 9 113 552.773494377702 1103.532435822204 2 552.7736694216728 MULTI CID FTMS 0 0 0 19045 82757.09375 1.0 0 0.0 4 Unmodified _HLIDFMSEI_ chr2:96335848-96341675|38|14.97|0.71|4.39|+|ENST00000435975|NCAPH,NCAPH;ENSG00000121152|ENST00000240423|NCAPH;ENST00000477409.1_1_2:97001567-97024936:+|nuORF 123.09622228370866 0.00035690919455 4 [H{I|L}]{I|L}D{M(Oxidation (M))|F}MSE{I|L} 9 0 + 89.681 0.0 0.0 8.1267 8.1267 95.894 0.0 0.0 0.0 19.366130211356065 67.01696749685551 19.366130211356065 21.619996000585147 0 0.6382104921644451 1.2218487496163564 2.1237125054200234 0.0 + + [H{I|L}]{I|L}D{M(Oxidation (M))|F}MSE{I|L};{[QN]|[E{I|L}]|[KN]}VH{M(Oxidation (M))|F}MSE{I|L};{I|L}{I|L}HD{M(Oxidation (M))|F}MSE{I|L};[H{I|L}]{I|L}D{M(Oxidation (M))|F}{[CP]|[EA]}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}VH{M(Oxidation (M))|F}MC{I|L}{I|L};{I|L}{I|L}DH{M(Oxidation (M))|F}MSE{I|L};[H{I|L}]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}MDE{I|L};{[QN]|[E{I|L}]|[KN]}S[WQ]{I|L}SE{I|L};{[QN]|[E{I|L}]|[KN]}VH{M(Oxidation (M))|F}{[CP]|[EA]}{M(Oxidation (M))|F}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}[HD]{I|L}{I|L}SE{I|L} 8.1267;6.1675;5.8405;5.625;5.2932;5.0747;4.8198;4.3256;3.6658;3.4801 +;-;-;-;-;-;-;-;-;- + 570 1 1.945 107345.3 0.3100000023841858 13841 5206 19045 HBL1_DMSO_200M_050219_2,19049 HBL1_DMSO_200M_050219_2,19049,HLIDFMSEI True True HLIDFMSEI 103.13884 552.773669421673 743812.3125 19045.0 ENSG00000121152|ENST00000240423|NCAPH;;chr2:96335848-96341675|38|14.97|0.71|4.39|+|ENST00000435975|NCAPH,NCAPH;;ENST00000477409.1_1_2:97001567-97024936:+|nuORF 7.811725457509358 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19051 103.15 294.0 775620.0 25 0 14111.0 -1 0 124 872.4171467820075 3485.63948126163 4 872.6707641482353 MULTI CID FTMS 0 0 0 19050 204610.234375 0.0125754927813152 47 -0.7316513061523438 1 4 [YQ]GPGQ 6 -1 21.916 0.0 0.0 0.62876 0.0 0.0 0.0 2852.339956685711 2852.339956685711 12.452359395051715 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 [YQ]GPGQ 0.62876 - 533 1 1.945 146571.9 1.0 13842 5207 19050 HBL1_DMSO_200M_050219_2,19051 HBL1_DMSO_200M_050219_2,19051, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19052 103.15 279.0 522860.0 25 0 54691.0 + 1277 AIPVFLEKL 9 94 515.3209782334542 1028.6274035337085 2 515.3212768435478 MULTI CID FTMS 0 0 0 19050 224502.40625 0.7043595309000116 3 -0.1128616333007812 2 Unmodified _AIPVFLEKL_ ENSG00000153827|ENST00000675903|TRIP12;ENST00000479037.5_1_2:230672327-230744801:-|nuORF;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 35.61225514009592 0.0995432151795903 4 [{I|L}A]PV{M(Oxidation (M))|F}{I|L}EK{I|L} 9 0 + 77.808 0.0 0.0 7.5642 7.5642 83.402 0.0 0.0 0.0 26.7152403747791 12.98332479720628 12.98332479720628 3.182503180159344 0 0.3494850021680094 2.0 0.7302046884880937 0.2396518287104437 + + [{I|L}A]PV{M(Oxidation (M))|F}{I|L}EK{I|L};[{I|L}A]PV{I|L}{M(Oxidation (M))|F}EK{I|L};[{I|L}A]{I|L}[VP]{M(Oxidation (M))|F}EK{I|L};{I|L}{I|L}[PG]{M(Oxidation (M))|F}{I|L}EK{I|L};{I|L}{I|L}[PG]{I|L}{M(Oxidation (M))|F}EK{I|L};{I|L}{I|L}A[VP]{M(Oxidation (M))|F}EK{I|L};[{I|L}A]{I|L}T{I|L}{M(Oxidation (M))|F}{I|L}A[PA];{I|L}{I|L}AT{I|L}{M(Oxidation (M))|F}{I|L}A[PA] 7.5642;7.2548;5.432;4.4294;4.12;3.8274;3.774;2.1694 +;-;-;-;-;-;-;- + 589 + 1 1.945 119688.8 1.0 13843 5207 19050 HBL1_DMSO_200M_050219_2,19052 HBL1_DMSO_200M_050219_2,19052,AIPVFLEKL True True AIPVFLEKL 103.15169 515.321276843548 4971545.5 19050.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12;;ENST00000479037.5_1_2:230672327-230744801:-|nuORF 5.830098946889241 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19053 103.16 464.0 53212.0 25 0 4703.9 -1 0 67 1077.319628894329 0 1077.319628894329 PEAK CID FTMS 0 0 0 -1 0 3 4 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.25478 0.0 0.0 1754.4535145251832 248.10299097232652 2002.5565054975093 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.25478 - 19 + 1 1.945 24834.5 1.0 13844 5207 19050 HBL1_DMSO_200M_050219_2,19053 HBL1_DMSO_200M_050219_2,19053, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19054 103.16 242.0 38322.0 25 0 2252.9 -1 0 28 1118.967333972454 0 1118.967333972454 PEAK CID FTMS 0 0 0 -1 0 4 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.945 17660.9 1.0 13845 5207 19050 HBL1_DMSO_200M_050219_2,19054 HBL1_DMSO_200M_050219_2,19054, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19055 103.17 268.0 561690.0 25 0 28757.0 -1 0 192 834.6388275639251 0 834.5817138552666 PEAK CID FTMS 0 0 0 19050 81544.0859375 1.0 0 0.0 5 4 QCTQGY{M(Oxidation (M))|F} 7 -1 10.354 0.0 0.0 0.62103 0.0 0.0 704.8460622550002 132.04607568912346 836.8921379441236 0.0 0.0 0.0 0.0 0 0.242992819099939 0.0 0.0 0.0 QCTQGY{M(Oxidation (M))|F} 0.62103 - 413 + 1 1.945 95795.4 1.0 13846 5207 19050 HBL1_DMSO_200M_050219_2,19055 HBL1_DMSO_200M_050219_2,19055, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19057 103.19 800.0 33999.0 25 0 1430.7 -1 0 76 1068.426318347454 0 1068.426318347454 PEAK CID FTMS 0 0 0 -1 0 1 4 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.1864 0.0 0.0 1156.3632435290897 828.3850191705686 1984.748262699658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.1864 - 6 + 1 1.945 28763.4 0.5299999713897705 13847 5208 19056 HBL1_DMSO_200M_050219_2,19057 HBL1_DMSO_200M_050219_2,19057, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19058 103.19 104.0 1606200.0 25 0 125690.0 + 1236 AIISELVSI 9 102 944.5659935563754 943.5587170897752 1 944.5673705935478 MULTI CID FTMS 0 0 0 19056 670895.3125 0.3296600010453965 -11 0.3621978759765625 2 Unmodified _AIISELVSI_ ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10821544-10823273:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2 109.62928328672726 0.0058899017516516 4 [{I|L}A]{I|L}SE{I|L}VS{I|L} 9 0 + 82.55 0.0 0.0 8.7488 8.7488 84.411 0.0 0.0 0.0 3.9789477908568216 14.973024840566469 3.9789477908568216 2.8434027467180982 0 0.6694451763165201 1.2218487496163564 2.048455006504028 0.0 + + [{I|L}A]{I|L}SE{I|L}VS{I|L};[{I|L}A]{I|L}DT{I|L}VS{I|L};[{I|L}A]VTE{I|L}VS{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}A{I|L}{I|L}VS{I|L};[{I|L}A]{I|L}SEV{I|L}S{I|L};[{I|L}A]VET{I|L}VS{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}A{I|L}VS{I|L};[{I|L}A]{I|L}DTV{I|L}S{I|L};[{I|L}A]VTEV{I|L}S{I|L};{[TV]|[{I|L}S]}EA{I|L}{I|L}VS{I|L} 8.7488;8.4475;8.4298;8.3271;8.1569;8.1285;7.9886;7.8556;7.8379;7.8215 +;-;-;-;-;-;-;-;-;- + 4906 1 1.945 109239.5 1.0 13848 5208 19056 HBL1_DMSO_200M_050219_2,19058 HBL1_DMSO_200M_050219_2,19058,AIISELVSI True True AIISELVSI 103.18785 944.567370593548 16393229.0 19056.0 ENSG00000110321|ENST00000339995|EIF4G2;;ENST00000532383.5_1_11:10821544-10823273:-|nuORF;;nc|ENSG00000110321|P78344-2|EIF4G2 2.337966501712799 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19059 103.19 356.0 492680.0 25 0 55237.0 + 11504 GILPMVPEV 9 123 954.5326045715154 953.5253281049154 1 954.536669909954 MULTI CID FTMS 0 0 0 19056 274541.59375 0.6229028604521856 5 -0.1639328002929687 3 Unmodified _GILPMVPEV_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 50.855029805455786 0.0384952370514206 4 [{I|L}T]EVA{I|L}T[HA] 9 8 + 50.374 0.0 0.0 5.283 5.283 76.248 0.0 0.0 0.0 3.90434385886261 3.90434385886261 3.90434385886261 3.90434385886261 0 1.7302046884880935 1.3010299956639813 1.2491348669726232 0.0 [{I|L}T]EVA{I|L}T[HA];{[VA]|[{I|L}G]}{I|L}PMVP{NN|[MP]|[D{I|L}]|[EV]};[{I|L}T]EVAT{I|L}[HA];{[VA]|[{I|L}G]}{I|L}PMVE[VP];{[VA]|[{I|L}G]}[RN]AVP{NN|[MP]|[D{I|L}]|[EV]};[{I|L}T]{I|L}DA{I|L}T[HA];{[VA]|[{I|L}G]}[RN]AVE[VP];[{I|L}T]{I|L}DAT{I|L}[HA];{[VA]|[{I|L}G]}{I|L}ET{I|L}T[HA];{[VA]|[{I|L}G]}{I|L}PMD{I|L}[VP] 5.283;4.8735;4.7867;4.543;4.2775;4.0944;3.9471;3.5982;3.384;3.1131 -;+;-;-;-;-;-;-;-;- + 987 1 1.945 117217.0 1.0 13849 5208 19056 HBL1_DMSO_200M_050219_2,19059 HBL1_DMSO_200M_050219_2,19059,GILPMVPEV True True GILPMVPEV 103.1943 954.536669909954 11314897.0 19056.0 nc|ENSG00000124214|O95793-2|STAU1;;nc|ENSG00000124214|O95793-3|STAU1;;ENSG00000124214|ENST00000371856|STAU1 7.162320454915364 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19060 103.21 800.0 118470.0 25 0 7466.8 + -1 ILYETVLTI 9 126 1064.623611010897 0 1064.626147449017 PEAK CID FTMS 0 0 0 19056 132943.609375 1.0 0 0.0 4 nc|ENSG00000166747|O43747-2|AP1G1;ENST00000565642.5_1_16:71777395-71799448:-|nuORF;ENST00000565009.5_1_16:71790048-71805048:-|nuORF;ENSG00000166747|ENST00000299980|AP1G1 4 {I|L}T{I|L}{I|L}YES 7 -1 30.201 0.0 0.0 1.4197 0.0 0.0 1081.6271525864445 223.14534937076408 1304.7725019572083 0.0 0.0 0.0 0.0 0 0.0 0.0 2.6237125054200234 0.0 {I|L}T{I|L}{I|L}YES 1.4197 - 2647 + 1 1.945 62828.2 0.5899999737739563 13850 5208 19056 HBL1_DMSO_200M_050219_2,19060 HBL1_DMSO_200M_050219_2,19060, False False ILYETVLTI 103.20816 1064.62614744902 810155.9375 19056.0 nc|ENSG00000166747|O43747-2|AP1G1;;ENST00000565642.5_1_16:71777395-71799448:-|nuORF;;ENST00000565009.5_1_16:71790048-71805048:-|nuORF;;ENSG00000166747|ENST00000299980|AP1G1 4.99440876642863 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19061 103.21 227.0 198380.0 25 0 8822.0 -1 0 98 964.2481236013664 0 964.3183471560478 PEAK CID FTMS 0 0 0 19056 71571.8359375 1.0 0 0.0 5 4 A 1 -1 5.4846 0.0 0.0 0.28469 0.0 0.0 1720.3755368982422 132.04595361881096 1852.4214905170527 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.28469 - 13 + 1 1.945 35510.2 1.0 13851 5208 19056 HBL1_DMSO_200M_050219_2,19061 HBL1_DMSO_200M_050219_2,19061, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19062 103.22 239.0 345270.0 25 0 12578.0 -1 0 120 879.9432788840625 0 879.8046142458916 PEAK CID FTMS 0 0 0 19056 40434.4375 0.485925404049973 -1 0.030609130859375 6 4 AVPVP{I|L}E 7 -1 19.685 0.0 0.0 1.1198 0.0 0.0 808.3206265163686 241.0988710992797 1049.4194976156484 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AVPVP{I|L}E 1.1198 - 209 + 1 1.945 57983.3 1.0 13852 5208 19056 HBL1_DMSO_200M_050219_2,19062 HBL1_DMSO_200M_050219_2,19062, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19064 103.23 800.0 257930.0 25 0 30939.0 + 45211 YQVEGMEWLRM 11 102 721.3333021657854 1440.6520513983708 2 721.3357421755791 MULTI CID FTMS 0 0 0 19063 101452.6484375 0.4269510201435293 3 -0.1122817993164062 1 Unmodified _YQVEGMEWLRM_ chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS;nc|ENSG00000119969|Q9NRZ9-7|HELLS;nc|ENSG00000119969|Q9NRZ9-8|HELLS 85.76441949171179 0.0033696626484081 4 YQVEMGEW{I|L}{[WT]|[RM]} 11 2 + 109.47 0.0 0.0 7.599 7.599 84.404 0.0 0.0 0.0 89.04616412192762 7.724254411176005 7.724254411176005 3.762874945799752 0 1.5994850021680094 1.3010299956639813 1.579689690656103 0.7742275032520141 YQVEMGEW{I|L}{[WT]|[RM]};YQVMEGEW{I|L}{[WT]|[RM]};YQVEGMEW{I|L}{[WT]|[RM]};YQVEMWW{I|L}{[WT]|[RM]};YQVMEWW{I|L}{[WT]|[RM]};YQVEMGE[{I|L}T]V{[WS]|[C(Carbamidomethyl (C)){I|L}]};YQVMWEW{I|L}{[WT]|[RM]};YQMVEGEW{I|L}{[WT]|[RM]};YQMPMGE[{I|L}T]V{[WS]|[C(Carbamidomethyl (C)){I|L}]};YQVWMEW{I|L}{[WT]|[RM]} 7.599;7.3378;7.3347;6.8999;6.6387;6.621;6.6171;6.6073;6.5846;6.5834 -;-;+;-;-;-;-;-;-;- + 7587 + 1 1.948 147914.5 0.800000011920929 13853 5209 19063 HBL1_DMSO_200M_050219_2,19064 HBL1_DMSO_200M_050219_2,19064,YQVEGMEWLRM True True YQVEGMEWLRM 103.23452 721.335742175579 3875173.5 19063.0 chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;;nc|ENSG00000119969|Q9NRZ9-5|HELLS;;nc|ENSG00000119969|Q9NRZ9-2|HELLS;;nc|ENSG00000119969|Q9NRZ9-3|HELLS;;nc|ENSG00000119969|Q9NRZ9-6|HELLS;;nc|ENSG00000119969|Q9NRZ9-7|HELLS;;ENSG00000119969|ENST00000348459|HELLS;;nc|ENSG00000119969|Q9NRZ9-4|HELLS;;nc|ENSG00000119969|Q9NRZ9-8|HELLS 6.8499148686726885 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19065 103.25 668.0 66784.0 25 0 1308.7 -1 0 91 1125.7349802331632 0 1125.585620105267 PEAK CID FTMS 0 0 0 -1 0 2 4 A 1 -1 4.6041 0.0 0.0 0.20468 0.0 0.0 1428.965979898164 746.4173067682249 2175.383286666389 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.20468 - 10 + 1 1.948 34752.1 1.0 13854 5209 19063 HBL1_DMSO_200M_050219_2,19065 HBL1_DMSO_200M_050219_2,19065, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19066 103.25 295.0 227480.0 25 0 2721.1 -1 0 116 842.0553072747407 0 842.3253051638603 PEAK CID FTMS 0 0 0 -1 0 3 4 R 1 -1 4.6041 0.0 0.0 0.27371 0.0 0.0 1055.424566110225 467.55039392642817 1522.974960036653 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.27371 - 39 + 1 1.948 49312.1 1.0 13855 5209 19063 HBL1_DMSO_200M_050219_2,19066 HBL1_DMSO_200M_050219_2,19066, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19068 103.26 412.0 535840.0 25 0 22165.0 -1 0 211 859.4857811728343 0 859.4852172732353 PEAK CID FTMS 0 0 0 -1 0 1 4 E 1 -1 5.4846 0.0 0.0 0.31943 0.0 0.0 793.5230627345373 791.3510836236936 1584.874146358231 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.31943 - 662 + 1 1.948 136799.3 1.0 13856 5210 19067 HBL1_DMSO_200M_050219_2,19068 HBL1_DMSO_200M_050219_2,19068, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19069 103.26 179.0 756580.0 25 0 93092.0 + 41844 VPYIGIVTI 9 82 974.59173402943 973.58445756283 1 976.598193347454 MULTI CID FTMS 0 0 0 19067 531994.1875 0.1267593260857341 10 -0.140106201171875 2 Unmodified _VPYIGIVTI_ ENSG00000140612|ENST00000268220|SEC11A;ENST00000558924.1_1_15:85213252-85214072:-|nuORF;ENST00000560266.5_1_15:85213252-85223982:-|nuORF;ENST00000560409.5_1_15:85213252-85222467:-|nuORF;nc|ENSG00000140612|P67812-2|SEC11A 34.18733598223924 0.1073653526364521 4 [VP]Y[KG]VVT 8 3 39.531 0.0 0.0 4.0603 0.0 0.0 0.0 127.0672205845674 127.0672205845674 3.3623365653404065 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.7614393726401688 [VP]Y[KG]VVT 4.0603 - 1304 1 1.948 94237.5 1.0 13857 5210 19067 HBL1_DMSO_200M_050219_2,19069 HBL1_DMSO_200M_050219_2,19069,VPYIGIVTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19070 103.27 256.0 434230.0 25 0 18117.0 40279 VGVAECILL 9 147 916.51596238756 915.50868592096 1 916.5179321169852 MULTI CID FTMS 0 0 0 19067 176342.734375 0.3609235949194866 5 -0.115936279296875 3 Unmodified _VGVAECILL_ ENSG00000172640|ENST00000310248|OR10AD1 38.15118350030904 0.0856056900103839 4 {[DA]|[EG]}{[DS]|[MA]|[CV]|TT}VA{I|L}{I|L}{I|L} 9 4 + 47.763 0.0 0.0 5.2171 5.2171 73.293 0.0 0.0 0.0 2.4544528147649203 16.478174818886373 2.4544528147649203 2.4544528147649203 0 0.1803115997617927 0.6020599913279624 0.805462187404089 0.0 {[DA]|[EG]}{[DS]|[MA]|[CV]|TT}VA{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EMA{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}GEMA{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}[DC]VA{I|L}{I|L}{I|L};{[DA]|[EG]}{[VA]|[{I|L}G]}MA{I|L}{I|L}{I|L};{[QS]|[NT]}[NS]AA{I|L}{I|L}{I|L};{[DA]|[EG]}{[ET]|[MV]}AA{I|L}{I|L}{I|L};[AG]VEMA{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}[MD]AA{I|L}{I|L}{I|L};{[DA]|[EG]}{[DS]|[MA]|[CV]|TT}V{I|L}A{I|L}{I|L} 5.2171;4.949;4.9326;4.9278;4.7872;4.7028;4.6959;4.5643;4.4066;4.3936 -;-;-;-;-;-;-;-;-;- 3597 1 1.948 74043.1 1.0 13858 5210 19067 HBL1_DMSO_200M_050219_2,19070 HBL1_DMSO_200M_050219_2,19070,VGVAECILL True True QVEMAILL 103.26967 916.517932116985 3948548.5 19067.0 ENST00000518587.1_1_5:170814889-170819841:+|nuORF 0.8166477282842001 1.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19071 103.28 800.0 33794.0 25 0 973.52 -1 0 72 1182.5015179631837 0 1182.138964831829 PEAK CID FTMS 0 0 0 19067 70845.8046875 1.0 0 0.0 4 4 T 1 -1 3.9794 0.0 0.0 0.16841 0.0 0.0 1457.32986590508 801.6006563775999 2258.93052228268 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.16841 - 6 + 1 1.948 27532.7 0.5 13859 5210 19067 HBL1_DMSO_200M_050219_2,19071 HBL1_DMSO_200M_050219_2,19071, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19072 103.3 800.0 67252.0 25 0 10078.0 -1 0 85 1076.2753153449648 0 1076.274584949017 PEAK CID FTMS 0 0 0 19067 83189.328125 1.0 0 0.0 5 4 M{I|L}{I|L}C{M(Oxidation (M))|F}{I|L}E 7 -1 27.472 0.0 0.0 1.2774 0.0 0.0 1075.0202829342672 223.0726259820922 1298.0929089163594 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 M{I|L}{I|L}C{M(Oxidation (M))|F}{I|L}E 1.2774 - 456 + 1 1.948 42715.3 0.5099999904632568 13860 5210 19067 HBL1_DMSO_200M_050219_2,19072 HBL1_DMSO_200M_050219_2,19072, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19073 103.31 800.0 268320.0 25 0 69438.0 + 2211 AQAQEVFFL 9 121 526.7742864010354 1051.5340198688707 2 526.7745239138603 MULTI CID FTMS 0 0 0 19067 89748.8515625 0.3393260734898467 -15 0.5006942749023438 6 Unmodified _AQAQEVFFL_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 88.90359156742426 0.0153595091083554 4 [QA]EQAV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 9 2 + 81.161 0.0 0.0 7.7184 7.7184 81.157 0.0 0.0 0.0 6.103790780459164 9.88991774771263 6.103790780459164 1.8309843995574224 0 0.7742275032520141 0.6989700043360187 1.406038390922711 2.048455006504028 [QA]EQAV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[QA]EVAQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[QA]EVAGA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[QA]QEAV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[QA]AGEAV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[AG]AEQAV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[QA]EVQA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QAAQ{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QAAGA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[QA]QAEV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 7.7184;7.5442;7.5431;7.3399;7.2211;7.1379;7.1379;7.0256;7.0244;6.936 -;-;-;-;-;-;-;-;-;- 3852 1 1.948 164755.5 0.9200000166893004 13861 5210 19067 HBL1_DMSO_200M_050219_2,19073 HBL1_DMSO_200M_050219_2,19073,AQAQEVFFL True True AQAQEVFFL 103.31123 526.77452391386 3827971.75 19067.0 ENSG00000170248|ENST00000307296|PDCD6IP;;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 4.435808499654134 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19075 103.32 397.0 357190.0 25 0 62459.0 + 21339 LPFEPVPVI 9 88 505.799944738174 1009.585336543148 2 505.7996093630791 MULTI CID FTMS 0 0 0 19074 163858.75 0.7222854032085656 1 -0.017852783203125 1 Unmodified _LPFEPVPVI_ ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1 63.562846038646086 0.0241094678104353 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}PVPV{I|L} 9 2 + 64.464 0.0 0.0 6.3852 6.3852 84.381 0.0 0.0 0.0 12.21848749616356 16.2101498947667 12.21848749616356 6.989700043360188 0 0.6989700043360187 1.2218487496163564 0.6382104921644451 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}PVPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EPVPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EP{I|L}VPV{I|L};[{I|L}P]{M(Oxidation (M))|F}EPVPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EPV{I|L}PV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EVP{I|L}PV{I|L};[{M(Oxidation (M))|F}E]P{I|L}PVPV{I|L};[VP]E{M(Oxidation (M))|F}P{I|L}PV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DP{I|L}PV{I|L};[{I|L}P]ME{I|L}VPV{I|L} 6.3852;5.6929;5.4069;5.175;5.1087;4.8106;4.7808;4.2926;4.1182;4.0519 -;-;-;+;-;-;-;-;-;- + 535 1 1.948 112335.9 1.0 13862 5211 19074 HBL1_DMSO_200M_050219_2,19075 HBL1_DMSO_200M_050219_2,19075,LPFEPVPVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19076 103.33 461.0 118760.0 25 0 7416.0 -1 0 65 1159.206532392676 3474.5977677782275 3 1159.536669909954 MULTI CID FTMS 0 0 0 19074 92929.0625 0.2297482020030083 -22 0.81561279296875 2 4 NMPN{I|L}NAVVQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 16 -1 45.989 0.0 0.0 1.3236 0.0 0.0 1742.815355330294 0.0 1742.815355330294 0.0 15.728590856097997 0.0 0.0 0 0.5 0.0 0.0 0.0 NMPN{I|L}NAVVQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.3236 - 2046 + 1 1.948 43259.5 1.0 13863 5211 19074 HBL1_DMSO_200M_050219_2,19076 HBL1_DMSO_200M_050219_2,19076, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19080 103.35 800.0 135470.0 25 0 24156.0 + 30881 RIPDIVLWPT 10 68 605.353424366568 1208.692295799936 2 605.3535034060478 MULTI CID FTMS 0 0 0 19079 52713.0625 0.630566544050545 1 -0.0302352905273437 1 Unmodified _RIPDIVLWPT_ ENSG00000018510|ENST00000264167|AGPS;ENST00000460342.1_1_2:178301730-178305781:+|nuORF 26.020703789607367 0.3840598856887971 4 [R{I|L}][DP]{I|L}V{I|L}W[TP] 10 0 + 48.204 0.0 0.0 3.9882 3.9882 78.975 0.0 0.0 0.0 5.8534811358448735 32.00659450546418 5.8534811358448735 10.299632233774432 0 1.0 1.154901959985743 0.0 0.0 + + [R{I|L}][DP]{I|L}V{I|L}W[TP];[WP]VV{I|L}V{I|L}W[TP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[SA]|[TG]}{I|L}V{I|L}[HK][TP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AA{I|L}V{I|L}[HK][TP];{[ES]|[DT]|[{I|L}C]}[VS]{I|L}V{I|L}[HK][TP];[R{I|L}][DP]{I|L}V{I|L}AA{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[SA]|[TG]}{I|L}V{I|L}VV[HQ];[WP]VV{I|L}V{I|L}AA{[QN]|[E{I|L}]|[KN]};[R{I|L}][DP]{I|L}V[RV]{[QN]|[E{I|L}]|[KN]} 3.9882;3.136;3.1276;2.6928;2.6739;2.4215;2.0042;1.5694;1.4638 +;-;-;-;-;-;-;-;- + 135 1 1.948 83879.7 0.3499999940395355 13864 5214 19079 HBL1_DMSO_200M_050219_2,19080 HBL1_DMSO_200M_050219_2,19080,RIPDIVLWPT False True RIPDIVLWPT 103.35352 605.353503406048 957983.9375 19079.0 ENSG00000018510|ENST00000264167|AGPS;;ENST00000460342.1_1_2:178301730-178305781:+|nuORF 8.088485876719156 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19081 103.37 800.0 172940.0 25 0 9154.7 -1 0 125 1159.206532392676 3474.5977677782275 3 1159.211840808392 MULTI CID FTMS 0 0 0 19079 106211.953125 0.4674666281189474 -20 0.5902328491210938 2 4 [Y{M(Oxidation (M))|F}]KA[QP]QDAN{I|L}NPMN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 30 -1 [Y{M(Oxidation (M))|F}]KA[QP]QDAN{I|L}NP + + 95.318 44.717 3.0078 2.7433 2.7433 45.462 0.0 0.0 0.0 0.0 49.57467628142653 0.0 0.0 0 1.8494850021680087 0.0 0.0 1.035666875892183 [Y{M(Oxidation (M))|F}]KA[QP]QDAN{I|L}NPMN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.7433 - 89075 + 1 1.948 87480.5 0.5400000214576721 13865 5214 19079 HBL1_DMSO_200M_050219_2,19081 HBL1_DMSO_200M_050219_2,19081, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19084 103.38 301.0 216640.0 25 0 30295.0 + -1 YPSYPALII 9 74 1036.571088339737 0 1036.569873034954 PEAK CID FTMS 0 0 0 19083 98701.4609375 0.5811921770968516 -8 0.2022323608398437 1 ENST00000479985.1_1_22:50169237-50169760:-|nuORF;nc|ENSG00000156983|P55201-4|BRPF1;ENSG00000156983|ENST00000383829|BRPF1;ENSG00000096070|ENST00000357641|BRPF3;ENSG00000100425|ENST00000404760|BRD1;nc|ENSG00000096070|Q9ULD4-2|BRPF3;nc|ENSG00000096070|Q9ULD4-3|BRPF3;nc|ENSG00000156983|P55201-3|BRPF1;nc|ENSG00000156983|P55201|BRPF1;nc|ENSG00000100425|O95696|BRD1 4 {I|L}{I|L}{I|L}[PA]YD 7 -1 28.549 0.0 0.0 1.3784 0.0 0.0 1053.568860173811 229.09900842838127 1282.667868602192 0.0 0.0 0.0 0.0 0 0.0 0.0 1.610924374808178 0.0 {I|L}{I|L}{I|L}[PA]YD 1.3784 - 300 + 1 1.948 50934.4 1.0 13866 5216 19083 HBL1_DMSO_200M_050219_2,19084 HBL1_DMSO_200M_050219_2,19084, False False YPSYPALII 103.37951 1036.56987303495 2678174.75 19083.0 ENST00000479985.1_1_22:50169237-50169760:-|nuORF;;nc|ENSG00000156983|P55201-4|BRPF1;;ENSG00000156983|ENST00000383829|BRPF1;;ENSG00000096070|ENST00000357641|BRPF3;;ENSG00000100425|ENST00000404760|BRD1;;nc|ENSG00000096070|Q9ULD4-2|BRPF3;;nc|ENSG00000096070|Q9ULD4-3|BRPF3;;nc|ENSG00000156983|P55201-3|BRPF1;;nc|ENSG00000156983|P55201|BRPF1;;nc|ENSG00000100425|O95696|BRD1 3.4795952240626016 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19089 103.4 158.0 851340.0 25 0 142780.0 + 21082 LPAGILPMV 9 77 910.5429221813972 909.5356457147972 1 910.5433227419852 MULTI CID FTMS 0 0 0 19088 352855.9375 0.2199031516947869 15 -0.14825439453125 1 Unmodified _LPAGILPMV_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 79.93452657146344 0.0175326119056068 4 [{I|L}P]Q{I|L}{I|L}PMV 8 2 + 66.469 0.0 0.0 7.308 7.308 77.472 0.0 0.0 0.0 6.197887582883936 16.40978057358332 6.197887582883936 0.5115252244738144 0 1.2134679910804405 1.2218487496163564 0.0 0.0 [{I|L}P]Q{I|L}{I|L}PMV;[{I|L}P]AG{I|L}{I|L}PMV;[{I|L}P]A{I|L}G{I|L}PMV;[QP]{I|L}{I|L}{I|L}PMV;[{I|L}P]Q{I|L}P{I|L}MV;[{I|L}P]AG{I|L}P{I|L}MV;[{I|L}P]VAA{I|L}PMV;[{I|L}P]A{I|L}GP{I|L}MV;[{I|L}P]A{I|L}VAPMV;[{I|L}P]Q{I|L}PM{I|L}V 7.308;7.2517;6.7272;6.6265;5.8291;5.7729;5.6915;5.2483;5.211;5.1807 -;+;-;-;-;-;-;-;-;- + 434 1 1.948 94051.5 1.0 13867 5220 19088 HBL1_DMSO_200M_050219_2,19089 HBL1_DMSO_200M_050219_2,19089,LPAGILPMV True True LPAGILPMV 103.39725 910.543322741985 15810818.0 19088.0 nc|ENSG00000124214|O95793-2|STAU1;;nc|ENSG00000124214|O95793-3|STAU1;;ENSG00000124214|ENST00000371856|STAU1 7.445813179016113 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19090 103.4 169.0 370750.0 25 0 18094.0 + 1237 AIISELVSI 9 85 944.5659935563754 943.5587170897752 1 946.5721313357352 MULTI CID FTMS 0 0 0 19088 276987.625 0.8393460270521266 3 -0.0207138061523437 2 Unmodified _AIISELVSI_ ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10821544-10823273:-|nuORF;nc|ENSG00000110321|P78344-2|EIF4G2 36.04419817259434 0.0971720506436186 4 [{I|L}A]{I|L}SDKV 7 4 28.013 0.0 0.0 2.9688 0.0 0.0 0.0 214.1021490568253 214.1021490568253 4.837513372786479 0.0 0.0 0.0 0 0.0 1.0 1.071333751784366 0.0 [{I|L}A]{I|L}SDKV 2.9688 - 611 1 1.948 46037.8 1.0 13868 5220 19088 HBL1_DMSO_200M_050219_2,19090 HBL1_DMSO_200M_050219_2,19090,AIISELVSI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19091 103.4 186.0 292800.0 25 0 12145.0 -1 0 84 872.4171467820075 3485.63948126163 4 872.9171020388603 MULTI CID FTMS 0 0 0 19088 117181.3828125 0.0070110062052775 60 -0.7551345825195312 3 4 Y{I|L}H 3 -1 11.427 0.0 0.0 0.32782 0.0 0.0 2660.199858314168 409.2115572565063 3069.411415570674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}H 0.32782 - 66 + 1 1.948 45839.6 1.0 13869 5220 19088 HBL1_DMSO_200M_050219_2,19091 HBL1_DMSO_200M_050219_2,19091, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19095 103.43 800.0 179160.0 25 0 27700.0 + 25579 NFAPVPLIV 9 120 485.2923466498343 968.5701403664684 2 485.2919799685478 MULTI CID FTMS 0 0 0 19094 105569.515625 0.1263414849964684 -26 0.6052703857421875 1 Unmodified _NFAPVPLIV_ REV__ENSG00000074800|ENST00000234590|ENO1;REV__ENST00000464920.1_1_1:8921421-8930582:-|nuORF;REV__nc|ENSG00000074800|P06733-2|ENO1 50.855029805455786 0.0384952370514206 4 [PA]{M(Oxidation (M))|F}NVP{I|L}V{I|L} 9 -1 + 68.885 0.0 0.0 7.1121 7.1121 83.507 0.0 0.0 0.0 6.963950151760656 14.973024840566469 6.963950151760656 3.99166239860314 0 0.4247425010840047 0.7958800173440752 0.0 1.285666875892183 [PA]{M(Oxidation (M))|F}NVP{I|L}V{I|L};[PA]{M(Oxidation (M))|F}N{I|L}PVV{I|L};[PA]{M(Oxidation (M))|F}NV{I|L}PV{I|L};[{I|L}P]A{M(Oxidation (M))|F}NPVV{I|L};[{I|L}A]MNVP{I|L}V{I|L};[PA]{M(Oxidation (M))|F}N{I|L}VPV{I|L};[{I|L}P]GP{I|L}{M(Oxidation (M))|F}NV{I|L};[{I|L}P]A{M(Oxidation (M))|F}NVPV{I|L};[{I|L}A]MN{I|L}PVV{I|L};[PA]{M(Oxidation (M))|F}{I|L}NPVV{I|L} 7.1121;6.6999;6.5676;6.3931;6.3502;6.2891;6.1231;5.9822;5.9381;5.8715 -;-;-;-;-;-;-;-;-;- 5760 1 1.948 112583.0 0.3600000143051147 13870 5223 19094 HBL1_DMSO_200M_050219_2,19095 HBL1_DMSO_200M_050219_2,19095,NFAPVPLIV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19098 103.45 800.0 196870.0 25 0 39716.0 -1 0 91 725.4230128844679 724.4157364178678 1 725.4236938357353 MULTI CID FTMS 0 0 0 19097 90822.765625 0.6689366743242743 5 -0.0684890747070312 1 4 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{I|L}TV 6 -1 + 54.715 0.0 0.0 7.553 7.553 82.863 0.0 0.0 0.0 4.947274948966935 16.197887582883936 4.947274948966935 3.0102999566398125 0 0.7614393726401688 1.5228787452803376 0.4247425010840047 0.0 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{I|L}TV;[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}T{I|L}V;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V{I|L}TV;[{I|L}T]V{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}VT{I|L}V;[{I|L}V]{M(Oxidation (M))|F}{M(Oxidation (M))|F}TV;[{I|L}V]T{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}V]{I|L}{M(Oxidation (M))|F}TV;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TV{I|L}V;[{I|L}V]{M(Oxidation (M))|F}T{M(Oxidation (M))|F}V 7.553;7.1375;6.8701;6.6508;6.4545;6.1964;6.1259;5.9533;5.6489;5.2887 -;-;-;-;-;-;-;-;-;- 304 1 1.948 114435.5 0.8500000238418579 13871 5225 19097 HBL1_DMSO_200M_050219_2,19098 HBL1_DMSO_200M_050219_2,19098, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19101 103.47 800.0 216300.0 25 0 44392.0 + 37855 TLVDEVFRI 9 97 546.3086717694489 1090.6027906056977 2 546.3088256716728 MULTI CID FTMS 0 0 0 19100 72954.1953125 0.517681289738164 -9 0.069244384765625 1 Unmodified _TLVDEVFRI_ ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2 96.11092074494114 0.0124975504059861 4 T{I|L}VDEV{M(Oxidation (M))|F}R{I|L} 9 0 + 108.96 0.0 0.0 9.9912 9.9912 64.954 0.0 0.0 0.0 72.03524722859527 11.478174818886371 11.478174818886371 0.0 0 0.7742275032520141 2.0 1.110924374808178 0.975772496747986 + + T{I|L}VDEV{M(Oxidation (M))|F}R{I|L};T{I|L}VD{I|L}D{M(Oxidation (M))|F}R{I|L};T{I|L}V{I|L}DD{M(Oxidation (M))|F}R{I|L};T{I|L}{I|L}VDD{M(Oxidation (M))|F}R{I|L};T{I|L}VDEV{I|L}[R{M(Oxidation (M))|F}];T{I|L}VD{I|L}D{I|L}[R{M(Oxidation (M))|F}];T{I|L}V{I|L}DD{I|L}[R{M(Oxidation (M))|F}];T{I|L}VD{I|L}EV[R{M(Oxidation (M))|F}];T{I|L}VDE{I|L}V[R{M(Oxidation (M))|F}];T{I|L}V{I|L}DEV[R{M(Oxidation (M))|F}] 9.9912;9.9912;9.6865;8.8204;8.5257;8.5257;8.221;7.79;7.79;7.4853 +;-;-;-;-;-;-;-;-;- + 854 + 1 1.948 137160.5 0.8500000238418579 13872 5227 19100 HBL1_DMSO_200M_050219_2,19101 HBL1_DMSO_200M_050219_2,19101,TLVDEVFRI True True TLVDEVFRI 103.46917 546.308825671673 2148555.75 19100.0 nc|ENSG00000117748|P15927-2|RPA2;;nc|ENSG00000117748|P15927-3|RPA2;;ENSG00000117748|ENST00000373912|RPA2 4.899072170257568 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19104 103.49 655.0 286440.0 25 0 21530.0 + 2990 AVIGGLVYL 9 151 904.5510612028936 903.5437847362936 1 904.552783191204 MULTI CID FTMS 0 0 0 19103 90626.390625 0.038031642732978 24 -0.3761138916015625 1 Unmodified _AVIGGLVYL_ ENSG00000102158|ENST00000618282|MAGT1;ENST00000476168.1_1_X:77112151-77150907:-|nuORF 56.04830969593885 0.0282699710924866 4 {[VA]|[{I|L}G]}GVA{I|L}VY{I|L} 9 3 + 70.351 0.0 0.0 7.7861 7.7861 83.442 0.0 0.0 0.0 5.5533966062068885 16.478174818886373 5.5533966062068885 3.0102999566398125 0 0.9258337024346172 1.0457574905606752 0.0 0.0 {[VA]|[{I|L}G]}GVA{I|L}VY{I|L};{[VA]|[{I|L}G]}G{I|L}G{I|L}VY{I|L};{[VA]|[{I|L}G]}GV{I|L}AVY{I|L};{[VA]|[{I|L}G]}GVAV{I|L}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VA{I|L}VY{I|L};{[VA]|[{I|L}G]}G{I|L}VAVY{I|L};{[VA]|[{I|L}G]}GG{I|L}{I|L}VY{I|L};{[VA]|[{I|L}G]}GAV{I|L}VY{I|L};{[VA]|[{I|L}G]}G{I|L}GV{I|L}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}G{I|L}VY{I|L} 7.7861;7.4529;7.258;7.1877;7.1715;6.9249;6.9249;6.9249;6.8545;6.8383 -;-;-;-;-;-;-;-;-;- 3415 1 1.948 119910.0 1.0 13873 5229 19103 HBL1_DMSO_200M_050219_2,19104 HBL1_DMSO_200M_050219_2,19104,AVIGGLVYL True True AVIGGLVYL 103.48717 904.552783191204 19986844.0 19103.0 ENSG00000102158|ENST00000618282|MAGT1;;ENST00000476168.1_1_X:77112151-77150907:-|nuORF 3.4912241299947104 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19105 103.5 800.0 19733.0 25 0 735.15 -1 0 44 1190.786669909954 0 1190.786669909954 PEAK CID FTMS 0 0 0 -1 0 2 4 V 1 -1 3.9794 0.0 0.0 0.16723 0.0 0.0 1189.0199207751832 1088.4610079401002 2277.4809287152834 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.16723 - 3 + 1 1.948 18468.3 0.4699999988079071 13874 5229 19103 HBL1_DMSO_200M_050219_2,19105 HBL1_DMSO_200M_050219_2,19105, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19110 103.52 345.0 211250.0 25 0 11563.0 37801 TLSLSFATV 9 99 938.5184006622778 937.5111241956778 1 938.5182983279228 MULTI CID FTMS 0 0 0 19109 139161.765625 0.6328628547606049 5 -0.0491104125976562 1 Unmodified _TLSLSFATV_ ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3 48.345845343767074 0.0439967357579942 4 [{I|L}T]SAS{M(Oxidation (M))|F}{I|L}TV 9 2 + 79.734 0.0 0.0 8.5048 8.5048 83.254 0.0 0.0 0.0 23.25257498915996 10.268024924119672 10.268024924119672 2.2577249674798594 0 0.7302046884880938 1.5228787452803376 2.860924374808178 0.0 [{I|L}T]SAS{M(Oxidation (M))|F}{I|L}TV;[{I|L}T]SA{M(Oxidation (M))|F}S{I|L}TV;[{I|L}T]S{M(Oxidation (M))|F}AS{I|L}TV;[{I|L}T]S{M(Oxidation (M))|F}TG{I|L}TV;[{I|L}T]S{M(Oxidation (M))|F}VTATV;[{I|L}T]{M(Oxidation (M))|F}SAS{I|L}TV;[{I|L}T]SAS{M(Oxidation (M))|F}{I|L}S{I|L};[{I|L}T]S{M(Oxidation (M))|F}TVATV;[{I|L}T]{M(Oxidation (M))|F}STG{I|L}TV;[{I|L}T]{M(Oxidation (M))|F}SVTATV 8.5048;8.264;8.0701;7.8264;7.6695;7.6129;7.4096;7.3973;7.3692;7.2123 -;-;-;-;-;-;-;-;-;- 3790 1 1.948 53382.4 1.0 13875 5233 19109 HBL1_DMSO_200M_050219_2,19110 HBL1_DMSO_200M_050219_2,19110,TLSLSFATV True True ASITSFLTV 103.52195 938.518298327923 1438471.375 19109.0 ENSG00000115760|ENST00000421745|BIRC6 3.3502732515335083 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19111 103.54 800.0 132700.0 25 0 7445.0 + 37231 TILDYINVV 9 95 1049.5872254442684 1048.5799489776684 1 1049.587939441204 MULTI CID FTMS 0 0 0 19109 100331.953125 0.2948159369183162 23 -0.3913497924804687 2 Unmodified _TILDYINVV_ ENSG00000142512|ENST00000339313|SIGLEC10;ENST00000357375.4_1_19:51914355-51919928:-|nuORF;nc|ENSG00000142512|Q96LC7-2|SIGLEC10;nc|ENSG00000142512|Q96LC7-3|SIGLEC10;nc|ENSG00000142512|Q96LC7-4|SIGLEC10;nc|ENSG00000142512|Q96LC7-6|SIGLEC10;nc|ENSG00000142512|Q96LC7-7|SIGLEC10;nc|ENSG00000142512|Q96LC7-8|SIGLEC10;nc|ENSG00000142512|Q96LC7-9|SIGLEC10 115.6920309560759 0.0032017028976397 4 [{I|L}T]{I|L}DY{I|L}NVV 9 0 + 98.616 0.0 0.0 9.4047 9.4047 95.248 0.0 0.0 0.0 15.510299956639813 16.478174818886373 15.510299956639813 11.046349804879156 0 0.5501648626366046 1.3979400086720375 2.4247425010840047 0.805462187404089 + + [{I|L}T]{I|L}DY{I|L}NVV;[{I|L}T]YD{I|L}{I|L}NVV;[{I|L}T]{I|L}D{I|L}YNVV;[{I|L}T]YVE{I|L}NVV;[Y{I|L}]DT{I|L}{I|L}NVV;[Y{I|L}]D{I|L}T{I|L}NVV;[{I|L}T]{I|L}DY{I|L}GGVV;[Y{I|L}]TD{I|L}{I|L}NVV;[{I|L}T]{I|L}DY{[NV]|[RG]}{I|L}V;[Y{I|L}]TVE{I|L}NVV 9.4047;8.3512;8.3329;7.9339;7.9255;7.8076;7.7584;7.3745;7.0809;6.9572 +;-;-;-;-;-;-;-;-;- + 5935 1 1.948 73115.0 0.4600000083446502 13876 5233 19109 HBL1_DMSO_200M_050219_2,19111 HBL1_DMSO_200M_050219_2,19111,TILDYINVV True True TILDYINVV 103.53582 1049.5879394412 2749615.25 19109.0 nc|ENSG00000142512|Q96LC7-7|SIGLEC10;;nc|ENSG00000142512|Q96LC7-9|SIGLEC10;;nc|ENSG00000142512|Q96LC7-3|SIGLEC10;;nc|ENSG00000142512|Q96LC7-2|SIGLEC10;;nc|ENSG00000142512|Q96LC7-4|SIGLEC10;;ENSG00000142512|ENST00000339313|SIGLEC10;;ENST00000357375.4_1_19:51914355-51919928:-|nuORF;;nc|ENSG00000142512|Q96LC7-8|SIGLEC10;;nc|ENSG00000142512|Q96LC7-6|SIGLEC10 6.093589146931966 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19114 103.55 344.0 297950.0 25 0 82482.0 + 2212 AQAQEVFFL 9 102 526.7742864010354 1051.5340198688707 2 526.7743408083916 MULTI CID FTMS 0 0 0 19113 163749.96875 0.6191124784625024 10 -0.1078109741210937 1 Unmodified _AQAQEVFFL_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000459659.1_1_3:33863478-33868168:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 49.93300154707207 0.0405168250806675 4 {NN|[MP]|[D{I|L}]|[EV]}QAAGA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 10 5 + 65.274 0.0 0.0 6.2075 6.2075 73.658 0.0 0.0 0.0 1.8751022177367247 7.269987279362624 1.8751022177367247 0.5115252244738144 0 0.5 1.0457574905606752 0.5114393726401688 1.8539171939081167 {NN|[MP]|[D{I|L}]|[EV]}QAAGA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}QAQA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[QA]EVAGA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[QA]EVQA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}QAAQ{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[QA]EVAQ{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAAGA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[QA]EQAV{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAQA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[QA]EQVA{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 6.2075;6.1589;6.0292;5.9806;5.6362;5.4578;5.4442;5.4415;5.3955;5.3916 -;-;-;-;-;-;-;-;-;- 2254 1 1.948 81097.4 1.0 13877 5235 19113 HBL1_DMSO_200M_050219_2,19114 HBL1_DMSO_200M_050219_2,19114,AQAQEVFFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19117 103.56 397.0 315210.0 25 0 46137.0 + + 9566 FILPIGATV 9 131 930.5663109603952 929.5590344937953 1 930.5685302615166 MULTI CID FTMS 0 0 0 19116 56256.84375 0.3050832119151005 -9 0.0834197998046875 1 Unmodified _FLIPIGAVT_ nc|ENSG00000105281|Q15758-3|SLC1A5;ENSG00000105281|ENST00000542575|SLC1A5;nc|ENSG00000115902|P43007-2|SLC1A4;nc|ENSG00000105281|Q15758-2|SLC1A5;ENSG00000115902|ENST00000234256|SLC1A4 59.79521254764295 0.0261954583213598 4 [{I|L}P]GATV{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 -1 + 47.63 0.0 0.0 5.1239 5.1239 74.888 0.0 0.0 0.0 17.201593034059567 4.137342758552691 4.137342758552691 3.4678748622465605 0 0.0 1.6989700043360187 0.3807196863200844 0.0 [{I|L}P]GATV{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]QTV{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]GAT{I|L}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]GA{I|L}{M(Oxidation (M))|F}{I|L}{[TV]|[{I|L}S]};[{I|L}P]GA{I|L}S{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]QT{I|L}V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]GAT{I|L}{M(Oxidation (M))|F}[{I|L}V];[{I|L}P]GA{M(Oxidation (M))|F}{I|L}{I|L}{[TV]|[{I|L}S]};[{I|L}P]Q{I|L}{M(Oxidation (M))|F}{I|L}{[TV]|[{I|L}S]};[{I|L}P]Q{I|L}S{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 5.1239;4.7508;4.3274;4.201;4.0666;3.9544;3.9486;3.9396;3.828;3.6936 -;-;-;-;-;-;-;-;-;- 2609 1 1.948 82861.2 1.0 13878 5237 19116 HBL1_DMSO_200M_050219_2,19117 HBL1_DMSO_200M_050219_2,19117,FLIPIGAVT False False FILPIGATV 103.56226 930.568530261517 1065058.25 19116.0 nc|ENSG00000105281|Q15758-3|SLC1A5;;ENSG00000105281|ENST00000542575|SLC1A5;;nc|ENSG00000115902|P43007-2|SLC1A4;;nc|ENSG00000105281|Q15758-2|SLC1A5;;ENSG00000115902|ENST00000234256|SLC1A4 4.886170864105225 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19120 103.58 512.0 207850.0 25 0 32854.0 + 27101 PFHSILSVL 9 98 506.7953947982166 1011.5762366632332 2 506.7953369021416 MULTI CID FTMS 0 0 0 19119 96965.375 0.4559935479737192 -10 0.0931015014648437 1 Unmodified _PFHSILSVL_ ENSG00000163382|ENST00000368235|NAXE;nc|ENSG00000163382|Q8NCW5-2|NAXE 53.57557251787612 0.0325303259649373 4 [HS]{I|L}P{M(Oxidation (M))|F}{I|L}SV{I|L} 9 4 + 54.576 0.0 0.0 5.3951 5.3951 71.155 0.0 0.0 0.0 1.3741709919125782 8.824995917031941 1.3741709919125782 0.9199419632364894 0 0.8182503180159344 0.0 2.007181037815473 0.0 [HS]{I|L}P{M(Oxidation (M))|F}{I|L}SV{I|L};[HS]P{I|L}{M(Oxidation (M))|F}{I|L}SV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}{M(Oxidation (M))|F}{I|L}SV{I|L};[HS]{I|L}P{I|L}{M(Oxidation (M))|F}SV{I|L};[HS]P{I|L}{I|L}{M(Oxidation (M))|F}SV{I|L};[HS]{I|L}{I|L}M{I|L}SV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}{I|L}{M(Oxidation (M))|F}SV{I|L};{[TV]|[{I|L}S]}HP{M(Oxidation (M))|F}{I|L}SV{I|L};[HS]{I|L}M{I|L}{I|L}SV{I|L};[HS]P{M(Oxidation (M))|F}{I|L}{I|L}SV{I|L} 5.3951;5.3042;5.2593;4.8873;4.7964;4.7955;4.7515;4.6183;4.498;4.407 -;-;-;-;-;-;-;-;-;- 3665 1 1.948 86307.4 1.0 13879 5239 19119 HBL1_DMSO_200M_050219_2,19120 HBL1_DMSO_200M_050219_2,19120,PFHSILSVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19121 103.59 477.0 96747.0 25 0 2674.0 + -1 GLLSAMEYV 9 97 982.4917475203312 0 982.495166003704 PEAK CID FTMS 0 0 0 19119 85306.59375 0.7946598653045603 14 -0.2830123901367187 2 ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3 4 AYEMAS 6 -1 29.066 0.0 0.0 1.4807 0.0 0.0 1027.539328925625 280.1672457330688 1307.7065746586936 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6861818737241734 0.0 AYEMAS 1.4807 - 320 + 1 1.948 40243.8 1.0 13880 5239 19119 HBL1_DMSO_200M_050219_2,19121 HBL1_DMSO_200M_050219_2,19121, False False GLLSAMEYV 103.58633 982.495166003704 767531.375 19119.0 ENSG00000168610|ENST00000264657|STAT3;;nc|ENSG00000168610|P40763-2|STAT3;;nc|ENSG00000168610|P40763-3|STAT3 4.586260795593262 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19123 103.6 800.0 379390.0 25 0 15456.0 -1 0 156 1159.206532392676 3474.5977677782275 3 1159.876635730267 MULTI CID FTMS 0 0 0 19122 283924.3125 0.5924261263579861 11 -0.2112197875976562 1 4 [Y{M(Oxidation (M))|F}]KA[QP]QDAN{I|L}NPMN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 30 -1 [Y{M(Oxidation (M))|F}]KA[QP]QDAN{I|L}NP + + 115.82 46.795 3.1476 3.3332 3.3332 46.736 0.0 0.0 0.0 0.0 57.17055459715348 0.0 0.0 0 1.75 0.0 0.3494850021680094 2.659379381312206 [Y{M(Oxidation (M))|F}]KA[QP]QDAN{I|L}NPMN{I|L}VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.3332 - 602749 + 1 1.948 181310.7 0.9399999976158142 13881 5240 19122 HBL1_DMSO_200M_050219_2,19123 HBL1_DMSO_200M_050219_2,19123, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19124 103.62 800.0 38919.0 25 0 798.64 -1 0 79 1174.6261738681196 0 1174.627612292767 PEAK CID FTMS 0 0 0 19122 119310.5859375 1.0 0 0.0 2 4 N 1 -1 3.0989 0.0 0.0 0.13203 0.0 0.0 1173.6115263477643 1056.5469454401002 2230.1584717878645 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.13203 - 3 + 1 1.948 27121.0 0.4699999988079071 13882 5240 19122 HBL1_DMSO_200M_050219_2,19124 HBL1_DMSO_200M_050219_2,19124, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19128 103.63 160.0 261660.0 25 0 34844.0 + 25325 NAIIPLPTI 9 68 951.5864658031248 950.5791893365248 1 951.5897094607352 MULTI CID FTMS 0 0 0 19127 71072.8515625 0.4555941527778932 -4 0.05792236328125 1 Unmodified _NAIIPLPTI_ ENSG00000172071|ENST00000303236|EIF2AK3 36.12702656103203 0.0967173616627612 4 {[QG]|[NA]}{I|L}{I|L}P{I|L} 6 3 36.688 0.0 0.0 3.8595 0.0 0.0 0.0 326.16784835435595 326.16784835435595 25.260847058321687 0.0 0.0 0.0 0 1.5 0.0 0.0 0.3807196863200844 + {[QG]|[NA]}{I|L}{I|L}P{I|L} 3.8595 + + 99 1 1.948 34912.5 1.0 13883 5243 19127 HBL1_DMSO_200M_050219_2,19128 HBL1_DMSO_200M_050219_2,19128,NAIIPLPTI True True NAIIPLPTI 103.62995 951.589709460735 1021601.125 19127.0 ENSG00000172071|ENST00000303236|EIF2AK3 5.436193307240804 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19129 103.64 800.0 26378.0 25 0 2554.7 -1 0 53 1121.958178699017 0 1121.958178699017 PEAK CID FTMS 0 0 0 -1 0 2 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.948 22857.3 0.6499999761581421 13884 5243 19127 HBL1_DMSO_200M_050219_2,19129 HBL1_DMSO_200M_050219_2,19129, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19132 103.66 413.0 15728.0 25 0 2087.7 -1 0 19 1121.012744128704 0 1121.012744128704 PEAK CID FTMS 0 0 0 -1 0 1 4 C(Carbamidomethyl (C)) 1 -1 5.4846 0.0 0.0 0.24484 0.0 0.0 1131.5141834704957 945.4573458307248 2076.9715293012205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.24484 - 6 + 1 1.948 15595.2 1.0 13885 5245 19131 HBL1_DMSO_200M_050219_2,19132 HBL1_DMSO_200M_050219_2,19132, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19133 103.67 800.0 203890.0 25 0 10812.0 + -1 SQFPEEILL 9 110 1075.5714846669532 0 1075.572436511517 PEAK CID FTMS 0 0 0 19131 145208.28125 1.0 0 0.0 2 nc|ENSG00000173821|Q63HN8-6|RNF213;ENST00000411702.7_1_17:78356744-78367295:+|nuORF;ENST00000560083.1_1_17:78362921-78367295:+|nuORF;nc|ENSG00000173821|Q63HN8|RNF213;ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213;ENST00000427003.7_1_17:78356226-78367295:+|nuORF 4 {I|L}{I|L}TQ{I|L}MD 7 -1 52.94 0.0 0.0 2.4633 0.0 0.0 1092.5680089144337 239.1039980524047 1331.6720069668384 0.0 0.0 0.0 0.0 0 0.0 0.0 1.695629013946523 1.0189301784845295 {I|L}{I|L}TQ{I|L}MD 2.4633 - 4026 + 1 1.948 107953.5 0.6899999976158142 13886 5245 19131 HBL1_DMSO_200M_050219_2,19133 HBL1_DMSO_200M_050219_2,19133, False False SQFPEEILL 103.67144 1075.57243651152 5740119.0 19131.0 nc|ENSG00000173821|Q63HN8-6|RNF213;;ENST00000411702.7_1_17:78356744-78367295:+|nuORF;;ENST00000560083.1_1_17:78362921-78367295:+|nuORF;;nc|ENSG00000173821|Q63HN8|RNF213;;ENSG00000173821|ENST00000582970|RNF213;;nc|ENSG00000173821|Q63HN8-4|RNF213;;ENST00000427003.7_1_17:78356226-78367295:+|nuORF 2.781386216481527 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19134 103.68 261.0 486630.0 25 0 36091.0 -1 0 169 872.6678015034827 3486.6421001475305 4 872.9182617068291 MULTI CID FTMS 0 0 0 19131 110381.890625 0.8424682683933485 2 -0.066619873046875 3 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GG 4 -1 10.15 0.0 0.0 0.29112 0.0 0.0 0.0 3135.474808237628 3135.474808237628 0.4726024563053723 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GG 0.29112 - 1445 1 1.948 82737.1 1.0 13887 5245 19131 HBL1_DMSO_200M_050219_2,19134 HBL1_DMSO_200M_050219_2,19134, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19136 103.68 77.0 1158900.0 25 0 185850.0 + 22486 LPVPAFNVI 9 95 485.2923466498343 968.5701403664684 2 485.2921935915947 MULTI CID FTMS 0 0 0 19135 554524.75 0.6636336253654702 -3 0.0520782470703125 1 Unmodified _LPVPAFNVI_ ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000111674|P09104-2|ENO2 42.96799951952854 0.0591636306142405 4 [PA]{M(Oxidation (M))|F}N{I|L}VPV{I|L} 9 6 + 54.645 0.0 0.0 5.6418 5.6418 70.813 0.0 0.0 0.0 3.1068946292104016 10.330145895351848 3.1068946292104016 0.2422750325201406 0 0.7429928190999391 0.8538719643217619 0.0 0.9802046884880936 [PA]{M(Oxidation (M))|F}N{I|L}VPV{I|L};[PA]{M(Oxidation (M))|F}NV{I|L}PV{I|L};[PA]{M(Oxidation (M))|F}N{I|L}PVV{I|L};[{I|L}P]GP{I|L}{M(Oxidation (M))|F}NV{I|L};[PA]{M(Oxidation (M))|F}NVP{I|L}V{I|L};[PA]{M(Oxidation (M))|F}{I|L}NVPV{I|L};[PA]{M(Oxidation (M))|F}{I|L}NPVV{I|L};[{I|L}P]GP{M(Oxidation (M))|F}{I|L}NV{I|L};[{I|L}P]V[PA]{M(Oxidation (M))|F}NV{I|L};[VP]AP{I|L}{M(Oxidation (M))|F}NV{I|L} 5.6418;5.6168;5.46;5.321;5.306;4.8661;4.6842;4.6466;4.4993;4.4276 -;-;-;-;-;-;-;-;+;- + 1035 1 1.948 75033.8 1.0 13888 5246 19135 HBL1_DMSO_200M_050219_2,19136 HBL1_DMSO_200M_050219_2,19136,LPVPAFNVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19137 103.69 265.0 570490.0 25 0 67737.0 + 41845 VPYIGIVTI 9 67 974.59173402943 973.58445756283 1 974.5931274294852 MULTI CID FTMS 0 0 0 19135 291283.21875 0.0127821693143912 45 -0.5526809692382812 2 Unmodified _VPYIGIVTI_ ENSG00000140612|ENST00000268220|SEC11A;ENST00000558924.1_1_15:85213252-85214072:-|nuORF;ENST00000560266.5_1_15:85213252-85223982:-|nuORF;ENST00000560409.5_1_15:85213252-85222467:-|nuORF;nc|ENSG00000140612|P67812-2|SEC11A 74.39630413441286 0.0193995060682538 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VAVVT{I|L} 9 4 + 80.35 0.0 0.0 8.253 8.253 83.728 0.0 0.0 0.0 2.887254899964347 14.973024840566469 2.887254899964347 2.887254899964347 0 0.5629529932484498 1.2218487496163564 0.7887254899964358 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VAVVT{I|L};[VP]Y{I|L}AVVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}VG{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{I|L}VVT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}AVVT{I|L};[VP]YA{I|L}VVT{I|L};[VP]Y{I|L}G{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}G{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GV{I|L}VT{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA{I|L}VVT{I|L} 8.253;7.9564;7.9438;7.9438;7.9438;7.6472;7.6472;7.6346;7.6346;7.6346 -;-;-;-;-;-;+;-;-;- + 1798 1 1.948 103331.1 1.0 13889 5246 19135 HBL1_DMSO_200M_050219_2,19137 HBL1_DMSO_200M_050219_2,19137,VPYIGIVTI True True VPYIGIVTI 103.6865 974.593127429485 413495104.0 19135.0 ENSG00000140612|ENST00000268220|SEC11A;;ENST00000558924.1_1_15:85213252-85214072:-|nuORF;;ENST00000560409.5_1_15:85213252-85222467:-|nuORF;;ENST00000560266.5_1_15:85213252-85223982:-|nuORF;;nc|ENSG00000140612|P67812-2|SEC11A 5.194810231526692 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19138 103.7 800.0 36881.0 25 0 1032.2 -1 0 75 1175.017993152142 0 1175.017993152142 PEAK CID FTMS 0 0 0 -1 0 3 4 G 1 -1 5.4846 0.0 0.0 0.23358 0.0 0.0 1637.6706165759654 650.3054293268186 2287.976045902784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.23358 - 6 + 1 1.948 26261.3 0.4900000095367431 13890 5246 19135 HBL1_DMSO_200M_050219_2,19138 HBL1_DMSO_200M_050219_2,19138, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19139 103.71 800.0 25789.0 25 0 1216.5 -1 0 56 1027.470263659954 0 1027.470263659954 PEAK CID FTMS 0 0 0 -1 0 4 4 {I|L} 1 -1 6.9897 0.0 0.0 0.34048 0.0 0.0 1400.607017943152 536.2118624322874 1936.8188803754392 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.34048 - 7 + 1 1.948 21946.2 0.4300000071525574 13891 5246 19135 HBL1_DMSO_200M_050219_2,19139 HBL1_DMSO_200M_050219_2,19139, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19141 103.73 800.0 154800.0 25 0 33457.0 + 37856 TLVDEVFRI 9 81 546.3086717694489 1090.6027906056977 2 546.3089477419853 MULTI CID FTMS 0 0 0 19140 67788.3671875 0.4810246923367329 11 -0.19818115234375 1 Unmodified _TLVDEVFRI_ ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2 63.960520009940105 0.0238892913700936 4 T{I|L}VD{I|L}D{M(Oxidation (M))|F}R{I|L} 9 2 + 103.04 0.0 0.0 9.4479 9.4479 80.238 0.0 0.0 0.0 81.13599734000228 11.271211393095244 11.271211393095244 0.2422750325201264 0 1.1549471895720984 2.0 0.7059771852360797 0.75 T{I|L}VD{I|L}D{M(Oxidation (M))|F}R{I|L};T{I|L}VDEV{M(Oxidation (M))|F}R{I|L};T{I|L}V{I|L}DD{M(Oxidation (M))|F}R{I|L};T{I|L}{I|L}VDD{M(Oxidation (M))|F}R{I|L};T{I|L}VD{I|L}D{I|L}[R{M(Oxidation (M))|F}];T{I|L}VDEV{I|L}[R{M(Oxidation (M))|F}];T{I|L}V{I|L}DD{I|L}[R{M(Oxidation (M))|F}];T{I|L}{I|L}VDD{I|L}[R{M(Oxidation (M))|F}];T{I|L}VD{I|L}EV[R{M(Oxidation (M))|F}];T{I|L}VDE{I|L}V[R{M(Oxidation (M))|F}] 9.4479;9.4257;8.8632;8.5468;8.2964;8.2742;7.7117;7.3953;7.3549;7.3327 -;+;-;-;-;-;-;-;-;- + 750 + 1 1.948 99418.6 0.699999988079071 13892 5247 19140 HBL1_DMSO_200M_050219_2,19141 HBL1_DMSO_200M_050219_2,19141,TLVDEVFRI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19142 103.75 800.0 253430.0 25 0 40447.0 + 16213 IVLDRLIEL 9 91 542.3424981171632 1082.6704433011264 2 542.3420287966728 MULTI CID FTMS 0 0 0 19140 101455.8515625 0.4022169779939396 -16 0.2091522216796875 2 Unmodified _IVLDRLIEL_ ENSG00000129083|ENST00000439561|COPB1 65.47368725323818 0.0230515101691092 4 {I|L}V{I|L}D 4 5 68.488 0.0 0.0 6.3258 0.0 0.0 0.0 639.3846768315474 639.3846768315474 23.14750645640862 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.2302046884880935 0.0 + {I|L}V{I|L}D 6.3258 + + 940 + 1 1.948 157912.5 0.8799999952316284 13893 5247 19140 HBL1_DMSO_200M_050219_2,19142 HBL1_DMSO_200M_050219_2,19142,IVLDRLIEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19143 103.76 608.0 35335.0 25 0 4939.2 -1 0 52 1022.570849597454 0 1022.570849597454 PEAK CID FTMS 0 0 0 -1 0 3 4 M 1 -1 4.6041 0.0 0.0 0.22535 0.0 0.0 1152.7061390369015 756.3355806940061 1909.0417197309075 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.22535 - 4 + 1 1.948 25138.0 1.0 13894 5247 19140 HBL1_DMSO_200M_050219_2,19143 HBL1_DMSO_200M_050219_2,19143, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19146 103.78 726.0 218230.0 25 0 40787.0 + 31123 RLLSFVVLA 9 67 509.3265834292515 1016.638613925303 2 509.3264037966728 MULTI CID FTMS 0 0 0 19145 117285.8125 0.7270072090624229 -9 0.1740341186523437 1 Unmodified _RLLSFVVLA_ ENSG00000163479|ENST00000295702|SSR2;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENST00000472898.5_1_1:155981561-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000532074.5_1_1:155984857-155990687:-|nuORF 29.081581746732265 0.1611639662936252 4 V{[RE]|[WV]}{M(Oxidation (M))|F}VVA{I|L} 8 6 39.492 0.0 0.0 3.8846 0.0 0.0 85.08996779609531 0.0 85.08996779609531 0.0 23.29396850295777 0.0 0.0 0 0.9353805887553706 0.0 0.4247425010840047 0.3494850021680094 V{[RE]|[WV]}{M(Oxidation (M))|F}VVA{I|L} 3.8846 - 42 1 1.948 123661.2 1.0 13895 5249 19145 HBL1_DMSO_200M_050219_2,19146 HBL1_DMSO_200M_050219_2,19146,RLLSFVVLA False True RLLSFVVLA 103.77549 509.326403796673 1429403.5 19145.0 ENSG00000163479|ENST00000295702|SSR2;;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;;ENST00000532074.5_1_1:155984857-155990687:-|nuORF;;ENST00000472898.5_1_1:155981561-155990687:-|nuORF 1.502408146858215 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19147 103.79 676.0 223050.0 25 0 30448.0 + 18108 KTLDWEIVEL 10 115 623.3399613558643 1244.6653697785284 2 623.3404418826103 MULTI CID FTMS 0 0 0 19145 114809.0703125 0.4656802776166066 -7 0.1398544311523437 2 Unmodified _KTLDWEIVEL_ ENSG00000137221|ENST00000372449|TJAP1;nc|ENSG00000137221|Q5JTD0-2|TJAP1;nc|ENSG00000137221|Q5JTD0-4|TJAP1 93.93812099017352 0.0090513810409226 4 {[QN]|[E{I|L}]|[KN]}SKWE{I|L}VE{I|L} 10 3 + 105.29 0.0 0.0 8.4591 8.4591 85.871 0.0 0.0 0.0 3.679067360440598 16.53212513775344 3.679067360440598 3.679067360440598 0 1.1549471895720984 1.0 2.657140670648974 0.0 {[QN]|[E{I|L}]|[KN]}SKWE{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}TKWE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}WDTK{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}WSKE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}SWKE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}SGEKE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}SK{[DA]|[EG]}E{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}TWKE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}SKWEV{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}WDT{I|L}KVE{I|L} 8.4591;8.1635;7.9928;7.9893;7.9114;7.8145;7.7228;7.6158;7.6147;7.5296 -;-;-;-;-;-;-;-;-;- 13951 1 1.948 117981.2 1.0 13896 5249 19145 HBL1_DMSO_200M_050219_2,19147 HBL1_DMSO_200M_050219_2,19147,KTLDWEIVEL True True KTLDWEIVEL 103.78727 623.34044188261 4016317.5 19145.0 ENSG00000137221|ENST00000372449|TJAP1;;nc|ENSG00000137221|Q5JTD0-2|TJAP1;;nc|ENSG00000137221|Q5JTD0-4|TJAP1 6.37085501352946 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19148 103.79 347.0 58412.0 25 0 4739.0 -1 0 55 949.9465742740496 0 949.9465820193292 PEAK CID FTMS 0 0 0 19145 89652.3359375 1.0 0 0.0 3 4 {I|L} 1 -1 5.4846 0.0 0.0 0.28898 0.0 0.0 1121.415840343218 660.3463228815061 1781.7621632247242 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.28898 - 3 + 1 1.948 21755.8 1.0 13897 5249 19145 HBL1_DMSO_200M_050219_2,19148 HBL1_DMSO_200M_050219_2,19148, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19151 103.82 800.0 11097.0 25 0 2475.7 -1 0 22 977.7950323303816 0 978.2471801638604 PEAK CID FTMS 0 0 0 19150 19239.330078125 1.0 0 0.0 1 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.948 14783.8 0.550000011920929 13898 5251 19150 HBL1_DMSO_200M_050219_2,19151 HBL1_DMSO_200M_050219_2,19151, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19152 103.83 800.0 23622.0 25 0 646.65 -1 0 56 1107.1307711798163 0 1107.473315417767 PEAK CID FTMS 0 0 0 19150 27356.36328125 1.0 0 0.0 2 4 K 1 -1 5.4846 0.0 0.0 0.24792 0.0 0.0 1229.5053645258456 851.6107271783811 2081.1160917042266 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.24792 - 1 + 1 1.948 21163.5 0.5099999904632568 13899 5251 19150 HBL1_DMSO_200M_050219_2,19152 HBL1_DMSO_200M_050219_2,19152, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19154 103.84 265.0 306900.0 25 0 46363.0 + 27102 PFHSILSVL 9 99 506.7953947982166 1011.5762366632332 2 506.7948181033134 MULTI CID FTMS 0 0 0 19153 174997.890625 0.8229526161685098 3 -0.0451202392578125 1 Unmodified _PFHSILSVL_ ENSG00000163382|ENST00000368235|NAXE;nc|ENSG00000163382|Q8NCW5-2|NAXE 63.562846038646086 0.0241094678104353 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}{M(Oxidation (M))|F}{I|L}SV{I|L} 9 2 + 73.783 0.0 0.0 7.2939 7.2939 77.374 0.0 0.0 0.0 0.5102999566398125 14.973024840566469 0.5102999566398125 0.5102999566398125 0 0.9247425010840048 0.0 2.3723637474483468 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}{M(Oxidation (M))|F}{I|L}SV{I|L};[HS]P{I|L}{M(Oxidation (M))|F}{I|L}SV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}{I|L}{M(Oxidation (M))|F}SV{I|L};[HS]{I|L}P{M(Oxidation (M))|F}{I|L}SV{I|L};[HS]P{I|L}{I|L}{M(Oxidation (M))|F}SV{I|L};[HS]{I|L}P{I|L}{M(Oxidation (M))|F}SV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}{I|L}S{M(Oxidation (M))|F}V{I|L};[HS]P{I|L}{I|L}S{M(Oxidation (M))|F}V{I|L};{[TV]|[{I|L}S]}HP{M(Oxidation (M))|F}{I|L}SV{I|L};[HS]{I|L}P{I|L}S{M(Oxidation (M))|F}V{I|L} 7.2939;7.2434;7.0916;7.0424;7.0412;6.8401;6.5185;6.4681;6.4471;6.267 -;-;-;-;-;-;-;-;-;- 2651 1 1.948 66643.1 1.0 13900 5252 19153 HBL1_DMSO_200M_050219_2,19154 HBL1_DMSO_200M_050219_2,19154,PFHSILSVL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19155 103.85 732.0 32404.0 25 0 4581.0 -1 0 55 1035.8083903245206 0 1035.875903308392 PEAK CID FTMS 0 0 0 -1 0 2 4 {I|L}E 2 -1 13.711 0.0 0.0 0.66251 0.0 0.0 1165.1320261550975 659.3037813775999 1824.4358075326973 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}E 0.66251 - 28 + 1 1.948 24041.9 1.0 13901 5252 19153 HBL1_DMSO_200M_050219_2,19155 HBL1_DMSO_200M_050219_2,19155, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19157 103.87 800.0 96253.0 25 0 5479.6 -1 0 84 1159.206532392676 3474.5977677782275 3 1159.539477527142 MULTI CID FTMS 0 0 0 19156 111215.8515625 0.2749585677862384 19 -0.2041702270507812 1 4 VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 14 -1 59.166 0.0 0.0 1.7028 0.0 0.0 1844.8776142200468 0.0 1844.8776142200468 0.0 13.543804089302398 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.7028 - 1972 + 1 1.948 53020.1 0.4399999976158142 13902 5253 19156 HBL1_DMSO_200M_050219_2,19157 HBL1_DMSO_200M_050219_2,19157, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19158 103.87 240.0 486230.0 25 0 34175.0 + 36203 SVVTSIFGV 9 114 908.5083662532846 907.5010897866846 1 908.511279284954 MULTI CID FTMS 0 0 0 19156 237772.75 0.3374323060164969 -15 0.28704833984375 2 Unmodified _SVVTSIFGV_ ENSG00000196305|ENST00000443024|IARS1 107.99703571036002 0.0067560930197464 4 [VS]VTS{I|L}{M(Oxidation (M))|F}GV 9 0 + 85.039 0.0 0.0 9.3707 9.3707 91.809 0.0 0.0 0.0 8.157427151936389 12.14719041932895 8.157427151936389 8.157427151936389 0 1.579689690656103 1.0969100130080565 2.524227503252014 0.0 + + [VS]VTS{I|L}{M(Oxidation (M))|F}GV;{[TV]|[{I|L}S]}SVS{I|L}{M(Oxidation (M))|F}GV;[VS]TVS{I|L}{M(Oxidation (M))|F}GV;{[TV]|[{I|L}S]}VSS{I|L}{M(Oxidation (M))|F}GV;[VS]VT{M(Oxidation (M))|F}TVGV;[VS]{I|L}SS{I|L}{M(Oxidation (M))|F}GV;{[TV]|[{I|L}S]}SV{M(Oxidation (M))|F}TVGV;[VS]TV{M(Oxidation (M))|F}TVGV;{[TV]|[{I|L}S]}VS{M(Oxidation (M))|F}TVGV;[VS]{I|L}S{M(Oxidation (M))|F}TVGV 9.3707;8.4718;8.3487;8.0629;7.9476;7.9399;7.0487;6.9256;6.6399;6.5168 +;-;-;-;-;-;-;-;-;- + 3357 1 1.948 81399.1 1.0 13903 5253 19156 HBL1_DMSO_200M_050219_2,19158 HBL1_DMSO_200M_050219_2,19158,SVVTSIFGV True True SVVTSIFGV 103.87024 908.511279284954 5410824.0 19156.0 ENSG00000196305|ENST00000443024|IARS1 7.652761300404866 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19161 103.89 800.0 119610.0 25 0 11144.0 + 8896 FAFQAEIAQL 10 117 569.3006733997373 1136.5867938662743 2 569.3006469607353 MULTI CID FTMS 0 0 0 19160 66799.4140625 0.1940290036692099 -15 0.2879257202148437 1 Unmodified _FAFQAEIAQL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P 65.23502041540118 0.0228537820337083 4 [QA]{M(Oxidation (M))|F}EA{M(Oxidation (M))|F}{I|L} 7 5 49.385 0.0 0.0 4.345 0.0 0.0 0.0 327.1662213386674 327.1662213386674 22.86486779333204 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.3252574989159953 1.392159058960253 [QA]{M(Oxidation (M))|F}EA{M(Oxidation (M))|F}{I|L} 4.345 - 3331 1 1.948 76250.8 0.3600000143051147 13904 5255 19160 HBL1_DMSO_200M_050219_2,19161 HBL1_DMSO_200M_050219_2,19161,FAFQAEIAQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19162 103.9 800.0 14200.0 25 0 3135.2 -1 0 24 1093.1841985223396 0 1093.185107409954 PEAK CID FTMS 0 0 0 19160 62805.015625 1.0 0 0.0 2 4 {M(Oxidation (M))|F}P 2 -1 9.464 0.0 0.0 0.43326 0.0 0.0 1091.7893432343292 845.3964937799436 1937.1858370142727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}P 0.43326 - 4 + 1 1.948 16427.7 0.4399999976158142 13905 5255 19160 HBL1_DMSO_200M_050219_2,19162 HBL1_DMSO_200M_050219_2,19162, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19166 103.93 800.0 137580.0 25 0 15317.0 + 4327 DARWWAVVV 9 86 551.2958413268268 1100.5771297204535 2 551.2955810427666 MULTI CID FTMS 0 0 0 19165 69753.96875 0.1441087442625289 -24 0.3766021728515625 1 Unmodified _DARWWAVVV_ ENSG00000157593|ENST00000393812|SLC35B2;nc|ENSG00000157593|Q8TB61-2|SLC35B2 23.78978130925829 0.2284941198415988 4 WAGEVVV 7 5 46.446 0.0 0.0 4.2202 0.0 0.0 342.164551770741 0.0 342.164551770741 0.0 29.45631999009912 0.0 0.0 0 0.5 0.0 0.0 0.0 WAGEVVV 4.2202 - 599 1 1.948 102599.5 0.9300000071525574 13906 5258 19165 HBL1_DMSO_200M_050219_2,19166 HBL1_DMSO_200M_050219_2,19166,DARWWAVVV False True DARWWAVVV 103.92879 551.295581042767 7280025.0 19165.0 nc|ENSG00000157593|Q8TB61-2|SLC35B2;;ENSG00000157593|ENST00000393812|SLC35B2 7.958544413248698 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19169 103.94 127.0 596110.0 25 0 84610.0 + 22487 LPVPAFNVI 9 74 485.2923466498343 968.5701403664684 2 485.2921325564384 MULTI CID FTMS 0 0 0 19168 387688.8125 0.4639708726310395 11 -0.1166229248046875 1 Unmodified _LPVPAFNVI_ ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000111674|P09104-2|ENO2 52.69307289633392 0.0344652456970635 4 [{I|L}P]VPA{M(Oxidation (M))|F}NV{I|L} 9 0 + 52.558 0.0 0.0 5.4263 5.4263 80.801 0.0 0.0 0.0 8.929789624012741 10.330145895351848 8.929789624012741 7.289332277134619 0 0.7429928190999391 1.2218487496163564 0.0 0.4247425010840047 + + [{I|L}P]VPA{M(Oxidation (M))|F}NV{I|L};[{I|L}P][PG]{I|L}{M(Oxidation (M))|F}NV{I|L};[{I|L}P]A[VP]{M(Oxidation (M))|F}NV{I|L};[PA]{M(Oxidation (M))|F}NV[{I|L}P]V{I|L};[VP]{I|L}PA{M(Oxidation (M))|F}NV{I|L};[{I|L}P]A{M(Oxidation (M))|F}[VP]NV{I|L};[{I|L}P]VPA{M(Oxidation (M))|F}GGV{I|L};[{I|L}P]V{[DS]|[MA]|[CV]|TT}{I|L}NV{I|L};[PA]{M(Oxidation (M))|F}N{I|L}[VP]V{I|L};[{I|L}P]A{[ET]|[MV]}{I|L}NV{I|L} 5.4263;4.6738;4.5448;4.5044;4.0868;4.0522;4.0371;3.9521;3.8955;3.8231 +;-;-;-;-;-;-;-;-;- + 554 1 1.948 65410.5 1.0 13907 5260 19168 HBL1_DMSO_200M_050219_2,19169 HBL1_DMSO_200M_050219_2,19169,LPVPAFNVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19170 103.95 800.0 171400.0 25 0 19963.0 + 9622 FLLGPRLVLA 10 82 549.8555973844026 1097.696641835605 2 549.8555786013603 MULTI CID FTMS 0 0 0 19168 70270.5703125 0.4401495933527115 -11 0.1724319458007812 2 Unmodified _FLLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 56.17704186161178 0.0466144807663799 4 {M(Oxidation (M))|F}{I|L}{I|L}G[R{I|L}]PV{I|L}A 10 2 + 53.607 0.0 0.0 4.8836 4.8836 82.482 0.0 0.0 0.0 14.168950068207453 10.114393726401689 10.114393726401689 10.740312677277188 0 2.024227503252014 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}{I|L}G[R{I|L}]PV{I|L}A;{M(Oxidation (M))|F}{I|L}{I|L}G[R{I|L}]PVA{I|L} 4.8836;3.9052 -;- 264 + 1 1.948 108619.2 0.3700000047683716 13908 5260 19168 HBL1_DMSO_200M_050219_2,19170 HBL1_DMSO_200M_050219_2,19170,FLLGPRLVLA True True FLLGPRLVLA 103.95177 549.85557860136 1234299.25 19168.0 ENSG00000170348|ENST00000303575|TMED10 5.992761611938477 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19171 103.97 800.0 9813.0 25 0 1031.5 -1 0 22 1186.950122058392 0 1186.950122058392 PEAK CID FTMS 0 0 0 -1 0 3 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.948 14420.4 0.449999988079071 13909 5260 19168 HBL1_DMSO_200M_050219_2,19171 HBL1_DMSO_200M_050219_2,19171, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19176 103.99 300.0 392070.0 25 0 62398.0 + 16214 IVLDRLIEL 9 75 542.3424981171632 1082.6704433011264 2 542.3425781130791 MULTI CID FTMS 0 0 0 19175 182167.765625 0.722195586052112 1 -0.008056640625 1 Unmodified _IVLDRLIEL_ ENSG00000129083|ENST00000439561|COPB1 57.24910588100465 0.0276051374632116 4 {I|L}V{I|L}D 4 5 68.175 0.0 0.0 6.297 0.0 0.0 0.0 639.3836781901764 639.3836781901764 36.25946806341254 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.1989700043360187 0.0 + {I|L}V{I|L}D 6.297 + + 508 + 1 1.948 93721.3 1.0 13910 5264 19175 HBL1_DMSO_200M_050219_2,19176 HBL1_DMSO_200M_050219_2,19176,IVLDRLIEL True True IVLDRLIEL 103.98589 542.342578113079 4226093.0 19175.0 ENSG00000129083|ENST00000439561|COPB1 3.380652825037638 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19179 104.0 465.0 233210.0 25 0 115350.0 -1 0 64 1101.5789951320912 0 1101.568408191204 PEAK CID FTMS 0 0 0 19178 80599.3515625 0.6473973498463824 -6 0.0571823120117187 1 4 YY{I|L}MT 5 -1 43.003 0.0 0.0 1.9537 0.0 0.0 1231.6787899694575 295.1417635553344 1526.820553524792 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6549471895720984 0.0 YY{I|L}MT 1.9537 - 129 + 1 1.948 72768.4 1.0 13911 5266 19178 HBL1_DMSO_200M_050219_2,19179 HBL1_DMSO_200M_050219_2,19179, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19182 104.02 800.0 192190.0 25 0 12557.0 + 8898 FAFQAEIAQL 10 100 1137.5938258311014 1136.5865493645017 1 1137.590747058392 MULTI CID FTMS 0 0 0 19181 106104.140625 0.8274554009877803 -2 0.0148849487304687 1 Unmodified _FAFQAEIAQL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P 122.17920374332846 0.0003471860834527 4 [QA]{M(Oxidation (M))|F}AE{M(Oxidation (M))|F}{I|L}AGA{I|L} 11 5 + 106.23 0.0 0.0 9.3461 9.3461 64.621 0.0 0.0 0.0 0.0 16.575773191777927 0.0 0.0 0 1.0044321917401078 0.0 1.4049471895720984 2.043157681736544 [QA]{M(Oxidation (M))|F}AE{M(Oxidation (M))|F}{I|L}AGA{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAE{M(Oxidation (M))|F}{I|L}AGA{I|L};[QA]{M(Oxidation (M))|F}AE{M(Oxidation (M))|F}{I|L}AQ{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAE{M(Oxidation (M))|F}{I|L}AQ{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AEA{M(Oxidation (M))|F}{I|L}AGA{I|L};[QA]{M(Oxidation (M))|F}EA{M(Oxidation (M))|F}{I|L}AGA{I|L};[QA]E{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}AGA{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AEA{M(Oxidation (M))|F}{I|L}AQ{I|L};[QA]{M(Oxidation (M))|F}EA{M(Oxidation (M))|F}{I|L}AQ{I|L};[QA]E{M(Oxidation (M))|F}A{M(Oxidation (M))|F}{I|L}AQ{I|L} 9.3461;9.3461;9.2973;9.2973;9.1377;9.1377;9.1029;9.0889;9.0889;9.0541 -;-;-;-;-;-;-;-;-;- 34784 1 1.948 96151.6 0.4399999976158142 13912 5268 19181 HBL1_DMSO_200M_050219_2,19182 HBL1_DMSO_200M_050219_2,19182,FAFQAEIAQL True True FAFQAEIAQL 104.02128 1137.59074705839 6131800.5 19181.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENSG00000080824|ENST00000216281|HSP90AA1;;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;;nc|ENSG00000183199|Q58FF7|HSP90AB3P;;nc|ENSG00000205940|Q58FF8|HSP90AB2P 4.341696898142497 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19183 104.03 747.0 123630.0 25 0 4331.1 + 42430 VTEVPPLGP 9 105 908.5083662532846 907.5010897866846 1 910.5126220583916 MULTI CID FTMS 0 0 0 19181 97338.75 0.783585370225371 -4 0.0270233154296875 2 Unmodified _VTEVPPLGP_ REV__ENSG00000184281|ENST00000333256|TSSC4;REV__nc|ENSG00000184281|Q9Y5U2-2|TSSC4 28.486842064014134 0.1687311288560894 4 {NN|[MP]|[D{I|L}]|[EV]}[{I|L}P][PS]{I|L}GP 9 -1 + 35.128 0.0 0.0 3.8708 3.8708 70.011 0.0 0.0 0.0 6.930665278408348 23.97054465722484 6.930665278408348 3.411290632962721 0 0.4247425010840047 2.0 1.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[{I|L}P][PS]{I|L}GP;{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P][TP]VGP;{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]{I|L}[PS]GP;[VS]VT[{I|L}A]{M(Oxidation (M))|F}[TA];{[TV]|[{I|L}S]}[RN][HK]GP;{[TV]|[{I|L}S]}[VS][{I|L}A]{M(Oxidation (M))|F}[TA];{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}E[TA];[VS]VP[PA]{[QN]|[E{I|L}]|[KN]}P;[VS]P[PG]{I|L}{[QN]|[E{I|L}]|[KN]}P;[VS]PV[PA]{[QN]|[E{I|L}]|[KN]}P 3.8708;3.4949;3.4338;2.6952;1.6607;1.2046;1.1128;1.0909;1.0584;0.4773 -;-;-;-;-;-;-;-;-;- 598 1 1.948 64975.0 1.0 13913 5268 19181 HBL1_DMSO_200M_050219_2,19183 HBL1_DMSO_200M_050219_2,19183,VTEVPPLGP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19185 104.05 483.0 176050.0 25 0 24574.0 + 18109 KTLDWEIVEL 10 74 623.3399613558643 1244.6653697785284 2 623.3400146365166 MULTI CID FTMS 0 0 0 19184 146963.875 0.596104279246663 13 -0.1205673217773437 1 Unmodified _KTLDWEIVEL_ ENSG00000137221|ENST00000372449|TJAP1;nc|ENSG00000137221|Q5JTD0-2|TJAP1;nc|ENSG00000137221|Q5JTD0-4|TJAP1 93.93812099017352 0.0090513810409226 4 {[QN]|[E{I|L}]|[KN]}WSKE{I|L}VE{I|L} 10 4 + 97.942 0.0 0.0 7.8689 7.8689 78.722 0.0 0.0 0.0 5.132717555561456 16.53212513775344 5.132717555561456 0.4845500650402812 0 1.1861818737241734 1.0 2.368415180652539 0.0 {[QN]|[E{I|L}]|[KN]}WSKE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}[KS]WE{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KT]WE{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}WTKE{I|L}VE{I|L};[{I|L}T]KDWE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}[KS]{[DA]|[EG]}E{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}WSKEV{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[KS]WEV{I|L}E{I|L};[KT]{I|L}DWE{I|L}VE{I|L};[WE]{I|L}SKE{I|L}VE{I|L} 7.8689;7.83;7.4565;7.4319;7.3587;7.0937;6.97;6.9311;6.9259;6.8335 -;-;-;-;-;-;-;-;+;- + 2202 1 1.948 68226.7 1.0 13914 5269 19184 HBL1_DMSO_200M_050219_2,19185 HBL1_DMSO_200M_050219_2,19185,KTLDWEIVEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19192 104.08 800.0 92871.0 25 0 6462.4 + 41870 VPYPLPKIDLI 11 77 634.3868046557069 1266.7590563782137 2 634.3864623904228 MULTI CID FTMS 0 0 0 19191 32861.18359375 0.3963461552958204 1 -0.0164031982421875 1 Unmodified _VPYPLPKIDLI_ ENSG00000141279|ENST00000322157|NPEPPS;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;ENST00000602788.5_1_17:45660176-45669919:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS;nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;nc|ENSG00000274487|A6NEC2|NPEPPSL1 48.56086444690353 0.1255999645772737 4 VPYP{I|L}R 6 6 65.957 0.0 0.0 5.2067 0.0 0.0 0.0 538.3042086236936 538.3042086236936 18.589003969301828 0.0 0.0 0.0 0 1.3807196863200843 1.5228787452803376 0.0 0.0 VPYP{I|L}R 5.2067 - 391 + 1 1.948 60198.2 0.3199999928474426 13915 5275 19191 HBL1_DMSO_200M_050219_2,19192 HBL1_DMSO_200M_050219_2,19192,VPYPLPKIDLI True True VPYPLPKIDLI 104.0819 634.386462390423 1583875.625 19191.0 nc|ENSG00000274487|A6NEC2-2|NPEPPSL1;;ENST00000525401.1_1_17:45663528-45663807:+|nuORF;;nc|ENSG00000141279|P55786-2|NPEPPS;;nc|ENSG00000274487|A6NEC2|NPEPPSL1;;ENSG00000141279|ENST00000322157|NPEPPS;;ENST00000602788.5_1_17:45660176-45669919:+|nuORF 5.294455528259277 2.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19195 104.1 800.0 208250.0 25 0 14838.0 + 24251 MAPLALHLL 9 94 489.793987720988 977.573422508776 2 489.7939941287041 MULTI CID FTMS 0 0 0 19194 113352.515625 0.1369289716353581 -28 0.325592041015625 1 Unmodified _MAPLALHLL_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1 56.04830969593885 0.0282699710924866 4 {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L} 9 0 + 57.08 0.0 0.0 5.839 5.839 75.516 0.0 0.0 0.0 4.73828478979911 9.085842975353629 4.73828478979911 2.218487496163561 0 0.7059771852360797 2.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L};{[DS]|[MA]|[CV]|TT}P{I|L}{I|L}AH{I|L}{I|L};{[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}{I|L}H{I|L};{[DS]|[MA]|[CV]|TT}P{I|L}{I|L}A{I|L}H{I|L};{[DS]|[MA]|[CV]|TT}{I|L}PA{I|L}H{I|L}{I|L};{[DS]|[MA]|[CV]|TT}{I|L}P{I|L}AH{I|L}{I|L};{[DS]|[MA]|[CV]|TT}{I|L}PA{I|L}{I|L}H{I|L};{[DS]|[MA]|[CV]|TT}{I|L}P{I|L}A{I|L}H{I|L};[H{I|L}]A{I|L}P{I|L}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[H{I|L}]A{I|L}PA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.839;5.612;5.5903;5.3634;5.3261;5.0992;5.0775;4.8506;4.6492;4.0334 +;-;-;-;-;-;-;-;-;- + 437 + 1 1.948 130890.8 0.8899999856948853 13916 5277 19194 HBL1_DMSO_200M_050219_2,19195 HBL1_DMSO_200M_050219_2,19195,MAPLALHLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19196 104.11 547.0 211550.0 25 0 54267.0 + 24867 MPMNVADLI 9 120 502.25129272282817 1002.4880325124564 2 502.2508422732353 MULTI CID FTMS 0 0 0 19194 107072.7734375 0.155179731703411 -37 0.4996261596679687 2 Unmodified _MPMNVADLI_ ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2 70.71552829651908 0.0208223590022201 4 {NN|[MP]|[D{I|L}]|[EV]}NMVAD{I|L}{I|L} 9 2 + 60.371 0.0 0.0 6.0221 6.0221 72.329 0.0 0.0 0.0 15.228787452803374 10.330145895351848 10.330145895351848 0.2422750325201406 0 0.6989700043360187 1.3010299956639813 0.0 1.4049471895720984 {NN|[MP]|[D{I|L}]|[EV]}NMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MNVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVAMD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MGGVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVAMD{I|L}{I|L} 6.0221;5.9979;5.954;5.5461;5.4781;5.1036;5.0794;5.0355;4.6276;4.5595 -;-;-;+;-;-;-;-;-;- + 998 1 1.948 93211.2 1.0 13917 5277 19194 HBL1_DMSO_200M_050219_2,19196 HBL1_DMSO_200M_050219_2,19196,MPMNVADLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19197 104.13 763.0 95720.0 25 0 16804.0 33951 SLHLSPFLV 9 101 506.7953947982166 1011.5762366632332 2 506.7946655154228 MULTI CID FTMS 0 0 0 19194 93276.453125 0.4386458651129134 28 -0.2378921508789062 3 Unmodified _SLHLSPFLV_ ENST00000399837.6_1_22:17690476-17700261:-|nuORF 50.855029805455786 0.0384952370514206 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}S{I|L}{I|L}SV{I|L} 9 7 + 55.27 0.0 0.0 5.4637 5.4637 82.266 0.0 0.0 0.0 9.503187623076954 8.824995917031941 8.824995917031941 9.018637558036673 0 0.8182503180159344 0.0 1.5994850021680094 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}S{I|L}{I|L}SV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{M(Oxidation (M))|F}{I|L}{I|L}SV{I|L};[HS]{I|L}M{I|L}{I|L}SV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}{M(Oxidation (M))|F}{I|L}SV{I|L};[HS]{I|L}P{M(Oxidation (M))|F}{I|L}SV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}{I|L}{M(Oxidation (M))|F}SV{I|L};[HS]{I|L}P{I|L}{M(Oxidation (M))|F}SV{I|L};[HS]P{M(Oxidation (M))|F}{I|L}{I|L}SV{I|L};[HS]P{I|L}{M(Oxidation (M))|F}{I|L}SV{I|L};[HS]P{I|L}{I|L}{M(Oxidation (M))|F}SV{I|L} 5.4637;4.5722;4.5243;4.5204;4.4725;4.3729;4.325;4.1788;4.127;3.9796 -;-;-;-;-;-;-;-;-;- 1758 1 1.948 58712.4 1.0 13918 5277 19194 HBL1_DMSO_200M_050219_2,19197 HBL1_DMSO_200M_050219_2,19197,SLHLSPFLV True False FPHSLLSVI 104.12511 506.794665515423 7895022.75 19194.0 nc|ENSG00000125630|Q9H9Y6-5|POLR1B;;ENSG00000125630|ENST00000263331|POLR1B;;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;;nc|ENSG00000125630|Q9H9Y6-4|POLR1B 3.386565009752909 2.0 False 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19200 104.14 160.0 332200.0 25 0 28243.0 + 8897 FAFQAEIAQL 10 77 569.3006733997373 1136.5867938662743 2 569.3006469607353 MULTI CID FTMS 0 0 0 19199 316335.59375 0.9188445878131908 9 -0.07525634765625 1 Unmodified _FAFQAEIAQL_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P 41.8396318013385 0.1381409678234242 4 [QA]{M(Oxidation (M))|F}AE{M(Oxidation (M))|F}{I|L} 7 5 40.762 0.0 0.0 3.5864 0.0 0.0 0.0 327.16667878840934 327.16667878840934 22.30494046594804 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 1.0 [QA]{M(Oxidation (M))|F}AE{M(Oxidation (M))|F}{I|L} 3.5864 - 681 1 1.948 45419.5 1.0 13919 5279 19199 HBL1_DMSO_200M_050219_2,19200 HBL1_DMSO_200M_050219_2,19200,FAFQAEIAQL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19201 104.15 597.0 183070.0 25 0 17726.0 + 9571 FLIQHLPLV 9 112 540.3342379433101 1078.65392295342 2 540.3338500857353 MULTI CID FTMS 0 0 0 19199 118583.4296875 0.2640553517926987 -47 0.620086669921875 2 Unmodified _FLIQHLPLV_ ENST00000424913.5_1_3:176771673-176816307:-|nuORF;ENST00000430069.5_1_3:176771676-176782752:-|nuORF 62.57269311338072 0.0246576765497938 4 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L}P 7 5 54.975 0.0 0.0 5.0967 0.0 0.0 0.0 227.1386351662417 227.1386351662417 22.365465603412225 0.0 0.0 0.0 0 1.1549471895720984 0.9208187539523752 0.0 0.5501648626366046 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L}P 5.0967 - 561 1 1.948 92444.1 1.0 13920 5279 19199 HBL1_DMSO_200M_050219_2,19201 HBL1_DMSO_200M_050219_2,19201,FLIQHLPLV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19206 104.18 800.0 131000.0 25 0 12619.0 + 25438 NEGDGLVLPVI 11 80 1125.6143056438475 1124.6070291772476 1 1125.614428699017 MULTI CID FTMS 0 0 0 19205 96833.953125 0.9098050217421798 -8 0.0933761596679687 1 Unmodified _NEGDGLVLPVI_ ENSG00000184445|ENST00000333479|KNTC1 74.19965305603844 0.0202339408097979 4 NV{I|L}PV{I|L} 6 5 58.629 0.0 0.0 5.2133 0.0 0.0 471.1983814923844 0.0 471.1983814923844 0.0 29.714672415332792 0.0 0.0 0 1.0 0.0 0.0 1.9489700043360187 NV{I|L}PV{I|L} 5.2133 - 688 1 1.948 71282.2 0.3199999928474426 13921 5283 19205 HBL1_DMSO_200M_050219_2,19206 HBL1_DMSO_200M_050219_2,19206,NEGDGLVLPVI True False NEGDGLVLPVI 104.1753 1125.61442869902 810930.125 19205.0 ENSG00000184445|ENST00000333479|KNTC1 6.125243186950684 1.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19208 104.18 108.0 432710.0 25 0 50631.0 + 4328 DARWWAVVV 9 59 551.2958413268268 1100.5771297204535 2 551.2957641482353 MULTI CID FTMS 0 0 0 19207 410159.1875 0.8473715046982782 2 -0.00872802734375 1 Unmodified _DARWWAVVV_ ENSG00000157593|ENST00000393812|SLC35B2;nc|ENSG00000157593|Q8TB61-2|SLC35B2 15.248480904072842 0.4239247793462406 4 EVVV 4 6 36.23 0.0 0.0 3.2919 0.0 0.0 656.3043080060562 0.0 656.3043080060562 0.0 21.53720958383822 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 EVVV 3.2919 - 98 1 1.948 46951.4 1.0 13922 5284 19207 HBL1_DMSO_200M_050219_2,19208 HBL1_DMSO_200M_050219_2,19208,DARWWAVVV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19212 104.2 800.0 83500.0 25 0 12221.0 + 22488 LPVPAFNVI 9 83 485.2923466498343 968.5701403664684 2 485.2920104861259 MULTI CID FTMS 0 0 0 19211 120123.71875 0.143759388496987 38 -0.274932861328125 1 Unmodified _LPVPAFNVI_ ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000111674|P09104-2|ENO2 34.18733598223924 0.1073653526364521 4 [{I|L}P]PG{I|L}{M(Oxidation (M))|F}NV{I|L} 9 3 + 50.283 0.0 0.0 5.1915 5.1915 70.471 0.0 0.0 0.0 0.9821913437413912 10.330145895351848 0.9821913437413912 0.9821913437413912 0 0.7429928190999391 1.3979400086720375 0.0 0.0 [{I|L}P]PG{I|L}{M(Oxidation (M))|F}NV{I|L};[PA]{M(Oxidation (M))|F}NV{I|L}PV{I|L};[PA]{M(Oxidation (M))|F}N{I|L}VPV{I|L};[PA]{M(Oxidation (M))|F}N{I|L}PVV{I|L};[{I|L}P]V[PA]{M(Oxidation (M))|F}NV{I|L};[{I|L}P]PG{I|L}{M(Oxidation (M))|F}GGV{I|L};[{I|L}P]PG{M(Oxidation (M))|F}KVV{I|L};[PA]{M(Oxidation (M))|F}GGV{I|L}PV{I|L};[{I|L}P]V{[DS]|[MA]|[CV]|TT}{I|L}NV{I|L};[PA]{M(Oxidation (M))|F}GG{I|L}VPV{I|L} 5.1915;5.0901;4.7286;4.5996;4.288;4.2408;4.0082;3.8413;3.6664;3.5305 -;-;-;-;+;-;-;-;-;- + 521 1 1.948 58443.3 0.8299999833106995 13923 5287 19211 HBL1_DMSO_200M_050219_2,19212 HBL1_DMSO_200M_050219_2,19212,LPVPAFNVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19215 104.22 800.0 14793.0 25 0 6145.2 -1 0 17 984.1980468630792 0 984.1980468630792 PEAK CID FTMS 0 0 0 -1 0 1 4 V 1 -1 6.9897 0.0 0.0 0.35546 0.0 0.0 982.8816761462768 881.4050997369749 1864.286775883252 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.35546 - 2 + 1 1.948 23070.8 0.3499999940395355 13924 5289 19214 HBL1_DMSO_200M_050219_2,19215 HBL1_DMSO_200M_050219_2,19215, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19223 104.27 800.0 148050.0 25 0 7035.6 + 30214 QVYDGFSFI 9 103 1075.5086510326091 1074.5013745660092 1 1075.506152331829 MULTI CID FTMS 0 0 0 19222 99365.9375 0.6389304694849218 14 -0.1261062622070312 1 Unmodified _QVYDGFSFI_ ENSG00000116918|ENST00000366639|TSNAX 147.05914393524117 0.0331831824667063 4 {[QV]|[N{I|L}]|[RA]|[KV]}YDG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L} 9 0 + 103.94 0.0 0.0 9.6734 9.6734 96.884 0.0 0.0 0.0 25.0 11.408103009885764 11.408103009885764 16.575221787320515 0 1.411954370472159 1.5228787452803376 1.7971062485323517 2.1549471895720984 + + {[QV]|[N{I|L}]|[RA]|[KV]}YDG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YDG{M(Oxidation (M))|F}AY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YDGAY{M(Oxidation (M))|F}{I|L};[YQ]VDG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}QVG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YDQY{M(Oxidation (M))|F}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}GAR{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L};[YQ]DVG{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YDT[CS]{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YDGA{M(Oxidation (M))|F}Y{I|L} 9.6734;8.1308;7.8731;7.3467;7.1989;7.0056;6.8233;6.7548;6.5164;6.3305 +;-;-;-;-;-;-;-;-;- + 9590 1 1.948 79338.7 0.4000000059604645 13925 5296 19222 HBL1_DMSO_200M_050219_2,19223 HBL1_DMSO_200M_050219_2,19223,QVYDGFSFI True True QVYDGFSFI 104.26553 1075.50615233183 1082648.0 19222.0 ENSG00000116918|ENST00000366639|TSNAX 7.996929009755452 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19227 104.29 800.0 140200.0 25 0 15463.0 + 27920 PLTGLPVLLT 10 116 512.326282416437 1022.638011899674 2 512.3260986208916 MULTI CID FTMS 0 0 0 19226 75100.6796875 0.1049974685842745 -43 0.3689804077148437 1 Unmodified _PLTGLPVLLT_ ENST00000525883.5_1_11:6587352-6591461:+|nuORF;ENST00000530197.5_1_11:6587352-6593213:+|nuORF 71.13359017698441 0.0189001043006994 4 [{I|L}P]GTV{I|L}P{I|L}T{I|L} 10 5 + 63.739 0.0 0.0 6.2328 6.2328 80.047 0.0 0.0 0.0 17.95880017344075 8.947340481202062 8.947340481202062 3.858696646399906 0 0.8182503180159344 1.6989700043360187 2.094187677400525 0.0 [{I|L}P]GTV{I|L}P{I|L}T{I|L};[{I|L}P]GT{I|L}P{I|L}VT{I|L};[{I|L}P]GT{I|L}VP{I|L}T{I|L};[{I|L}P]GT{I|L}PV{I|L}T{I|L};[{I|L}P]{I|L}PGT{I|L}VT{I|L};[{I|L}P]GTV{I|L}TP{I|L}{I|L};[{I|L}P]GTV{I|L}PT{I|L}{I|L};[{I|L}P]P{I|L}GT{I|L}VT{I|L};[{I|L}P]{I|L}PG{I|L}TVT{I|L};[{I|L}P]GTVT{I|L}P{I|L}{I|L} 6.2328;5.8554;5.8054;5.3497;5.2063;5.1262;5.1214;5.0842;4.9906;4.9898 -;-;-;-;-;-;-;-;-;- 1715 1 1.948 89763.7 0.3400000035762787 13926 5299 19226 HBL1_DMSO_200M_050219_2,19227 HBL1_DMSO_200M_050219_2,19227,PLTGLPVLLT True False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19228 104.3 800.0 247040.0 25 0 31816.0 + 6077 DSPVLLVI 8 100 855.5180913752279 854.5108149086278 1 855.5185424685478 MULTI CID FTMS 0 0 0 19226 174472.703125 0.3138513699248494 32 -0.2192306518554687 2 Unmodified _DSPVLLVI_ ENSG00000111912|ENST00000392477|NCOA7;nc|ENSG00000111912|Q8NI08-2|NCOA7;nc|ENSG00000111912|Q8NI08-5|NCOA7;nc|ENSG00000111912|Q8NI08-7|NCOA7 90.83580072412532 0.0563165270037559 4 [VP]SD{I|L}{I|L}V{I|L} 8 4 + 86.974 0.0 0.0 10.178 10.178 88.601 0.0 0.0 0.0 19.29892479403911 16.40978057358332 16.40978057358332 4.731975075880328 0 0.9049471895720984 1.5228787452803376 1.8539171939081167 0.0 [VP]SD{I|L}{I|L}V{I|L};[VP]{I|L}SD{I|L}V{I|L};[VP]S{I|L}D{I|L}V{I|L};[VP]SD{I|L}V{I|L}{I|L};[VP]{I|L}SDV{I|L}{I|L};[VP]{I|L}{I|L}SDV{I|L};[VP]{I|L}S{I|L}DV{I|L};[VP]{I|L}{I|L}DSV{I|L};[PS]DV{I|L}{I|L}V{I|L};[VP]S{I|L}DV{I|L}{I|L} 10.178;9.6245;9.1274;8.9698;8.4161;8.275;8.2549;8.1189;7.9198;7.919 -;-;-;-;-;-;-;-;-;- 1075 1 1.948 134023.5 0.5199999809265137 13927 5299 19226 HBL1_DMSO_200M_050219_2,19228 HBL1_DMSO_200M_050219_2,19228,DSPVLLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19235 104.33 358.0 300100.0 25 0 33689.0 + 24870 MPMNVADLI 9 81 1003.4944277581774 1002.4871512915772 1 1005.49913328886 MULTI CID FTMS 0 0 0 19234 277656.09375 0.9936239167703904 4 -0.0473861694335937 1 Unmodified _MPMNVADLI_ ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2 14.838274106304384 0.4350285940865338 4 {NN|[MP]|[D{I|L}]|[EV]}NV{[CT]|[{M(Oxidation (M))|F}G]}D{I|L} 8 4 44.742 0.0 0.0 4.4631 0.0 0.0 0.0 126.07558051790616 126.07558051790616 1.8460704742926093 0.0 0.0 0.0 0 0.0 0.0 1.0044321917401078 1.2302046884880935 {NN|[MP]|[D{I|L}]|[EV]}NV{[CT]|[{M(Oxidation (M))|F}G]}D{I|L} 4.4631 - 2490 1 1.948 76549.4 1.0 13928 5305 19234 HBL1_DMSO_200M_050219_2,19235 HBL1_DMSO_200M_050219_2,19235,MPMNVADLI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19238 104.34 68.0 1001600.0 25 0 74985.0 + 24252 MAPLALHLL 9 64 489.793987720988 977.573422508776 2 489.7939941287041 MULTI CID FTMS 0 0 0 19237 732984.125 0.8854392150707313 2 -0.0342864990234375 1 Unmodified _MAPLALHLL_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1 45.7499826716795 0.0496882803020414 4 {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L} 9 0 + 51.306 0.0 0.0 5.2483 5.2483 77.56 0.0 0.0 0.0 10.670885430974302 5.243371891081416 5.243371891081416 4.815534464597704 0 0.6861818737241735 2.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L};{[DS]|[MA]|[CV]|TT}{I|L}PA{I|L}H{I|L}{I|L} 5.2483;4.7557 +;- + 181 + 1 1.948 59009.7 1.0 13929 5307 19237 HBL1_DMSO_200M_050219_2,19238 HBL1_DMSO_200M_050219_2,19238,MAPLALHLL True True MAPLALHLL 104.34174 489.793994128704 17852898.0 19237.0 ENSG00000104951|ENST00000391826|IL4I1;;chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1 8.276419003804525 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19239 104.36 800.0 230700.0 25 0 37245.0 -1 0 111 872.4150633933788 1742.8155738535577 2 872.9152099490166 MULTI CID FTMS 0 0 0 19237 15419.42578125 0.2138842808445414 1 -0.0186386108398437 2 4 [H{I|L}]Y{[QC]|[C(Carbamidomethyl (C))A]}D{I|L} 7 -1 12.623 0.0 0.0 0.72428 0.0 0.0 0.0 867.3970917581074 867.3970917581074 -1.0235027448111786 0.0 -1.0235027448111786 0.0 0 0.0 0.0 0.5866968715561641 0.8807196863200843 [H{I|L}]Y{[QC]|[C(Carbamidomethyl (C))A]}D{I|L} 0.72428 - 470 1 1.948 131619.0 0.3199999928474426 13930 5307 19237 HBL1_DMSO_200M_050219_2,19239 HBL1_DMSO_200M_050219_2,19239, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19241 104.36 85.0 529660.0 25 0 153740.0 + 24868 MPMNVADLI 9 59 502.25129272282817 1002.4880325124564 2 502.2513305544853 MULTI CID FTMS 0 0 0 19240 542497.3125 0.7862371049229556 -6 0.0439300537109375 1 Unmodified _MPMNVADLI_ ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2 44.40701690623563 0.0526327925666318 4 {NN|[MP]|[D{I|L}]|[EV]}NVADM{I|L}{I|L} 9 2 + 62.647 0.0 0.0 6.2491 6.2491 86.604 0.0 0.0 0.0 20.87128018967597 43.93537046338109 20.87128018967597 9.208187539523747 0 0.8182503180159344 1.5228787452803376 0.3494850021680094 0.2887254899964357 {NN|[MP]|[D{I|L}]|[EV]}NVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NMV{[DA]|[EG]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVM{[DA]|[EG]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MNV{[DA]|[EG]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGMV{[DA]|[EG]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NMT[PS]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVM{[DA]|[EG]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MGGV{[DA]|[EG]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MNT[PS]{I|L}{I|L} 6.2491;5.3306;5.0469;4.9674;4.7466;4.1283;4.1219;4.0489;3.8281;3.8216 -;-;-;-;+;-;-;-;-;- + 186 1 1.948 38228.4 1.0 13931 5308 19240 HBL1_DMSO_200M_050219_2,19241 HBL1_DMSO_200M_050219_2,19241,MPMNVADLI True True MPMNVADLI 104.36038 502.251330554485 27153768.0 19240.0 nc|ENSG00000156976|Q14240-2|EIF4A2;;ENSG00000141543|ENST00000649764|EIF4A3;;ENSG00000156976|ENST00000323963|EIF4A2 4.913307825724284 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19242 104.37 596.0 121640.0 25 0 11577.0 + 29523 QLLNWVYLSL 10 96 624.8518317794264 1247.6891106256528 2 624.8519775271416 MULTI CID FTMS 0 0 0 19240 125478.5703125 0.4851993750541124 -21 0.167510986328125 2 Unmodified _QLLNWVYLSL_ ENSG00000165424|ENST00000372336|ZCCHC24 34.40172386719151 0.2166836008404837 4 [Q{I|L}]{I|L}[Q{I|L}]{I|L}S{I|L} 8 4 36.449 0.0 0.0 2.9213 0.0 0.0 0.0 336.0960935559595 336.0960935559595 3.2859991398410315 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.7302046884880937 0.3807196863200844 [Q{I|L}]{I|L}[Q{I|L}]{I|L}S{I|L} 2.9213 - 474 1 1.948 63887.5 1.0 13932 5308 19240 HBL1_DMSO_200M_050219_2,19242 HBL1_DMSO_200M_050219_2,19242,QLLNWVYLSL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19245 104.39 800.0 247300.0 25 0 22972.0 + 25350 NAPAIIFI 8 115 858.5083756899841 857.501099223384 1 858.5074951052666 MULTI CID FTMS 0 0 0 19244 137659.171875 0.224382345309612 -35 0.3097305297851562 1 Unmodified _NAPAIIFI_ ENSG00000013275|ENST00000157812|PSMC4;ENSG00000165280|ENST00000358901|VCP;ENST00000493886.5_1_9:35062192-35072350:-|nuORF;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;ENST00000596386.1_1_19:40477100-40485896:+|nuORF;ENST00000601697.5_1_19:40477100-40486546:+|nuORF;nc|ENSG00000013275|P43686-2|PSMC4 86.12129899796855 0.0650563179454676 4 [PA]NA{I|L}{I|L}{M(Oxidation (M))|F}{I|L} 8 2 + 79.972 0.0 0.0 9.3262 9.3262 79.924 0.0 0.0 0.0 0.0514997831990626 16.40978057358332 0.0514997831990626 0.0514997831990626 0 0.8737125054200234 1.0 0.0 1.610924374808178 [PA]NA{I|L}{I|L}{M(Oxidation (M))|F}{I|L};{[QG]|[NA]}PA{I|L}{I|L}{M(Oxidation (M))|F}{I|L};[PA]AN{I|L}{I|L}{M(Oxidation (M))|F}{I|L};[PA]{I|L}AN{I|L}{M(Oxidation (M))|F}{I|L};[PA]NA{I|L}{M(Oxidation (M))|F}{I|L}{I|L};{[QG]|[NA]}PA{I|L}{M(Oxidation (M))|F}{I|L}{I|L};[PA]{I|L}NA{I|L}{M(Oxidation (M))|F}{I|L};[PA]N{I|L}A{I|L}{M(Oxidation (M))|F}{I|L};{[QG]|[NA]}P{I|L}A{I|L}{M(Oxidation (M))|F}{I|L};[PA]AN{I|L}{M(Oxidation (M))|F}{I|L}{I|L} 9.3262;9.3202;8.6917;8.4776;8.2745;8.2684;8.0783;7.7273;7.7213;7.64 -;+;-;-;-;-;-;-;-;- + 1505 1 1.948 138089.5 0.9800000190734864 13933 5310 19244 HBL1_DMSO_200M_050219_2,19245 HBL1_DMSO_200M_050219_2,19245,NAPAIIFI True True NAPAIIFI 104.39162 858.507495105267 5211381.0 19244.0 ENSG00000165280|ENST00000358901|VCP;;ENSG00000013275|ENST00000157812|PSMC4;;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;;ENST00000493886.5_1_9:35062192-35072350:-|nuORF;;ENST00000596386.1_1_19:40477100-40485896:+|nuORF;;nc|ENSG00000013275|P43686-2|PSMC4;;ENST00000601697.5_1_19:40477100-40486546:+|nuORF 4.1578013102213545 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19247 104.4 134.0 481190.0 25 0 41178.0 + 9572 FLIQHLPLV 9 92 540.3342379433101 1078.65392295342 2 540.3338500857353 MULTI CID FTMS 0 0 0 19246 316000.78125 0.7036539395059516 -15 0.1425018310546875 1 Unmodified _FLIQHLPLV_ ENST00000424913.5_1_3:176771673-176816307:-|nuORF;ENST00000430069.5_1_3:176771676-176782752:-|nuORF 51.629811660486645 0.0367964933207742 4 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}V 9 4 + 65.786 0.0 0.0 6.0989 6.0989 78.048 0.0 0.0 0.0 12.21848749616356 14.973024840566469 12.21848749616356 3.0102999566398125 0 0.7742275032520141 0.9208187539523752 0.0 0.3252574989159953 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}V;[H{I|L}]Q{I|L}{I|L}{M(Oxidation (M))|F}P{I|L}V;[H{I|L}]Q{I|L}{M(Oxidation (M))|F}P{I|L}{I|L}V;[H{I|L}]Q{I|L}{I|L}M{I|L}{I|L}V;[HQ]{I|L}{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}V;[{I|L}P][YK]H{I|L}P{I|L}V;[H{I|L}][AG]{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}V;[H{I|L}]Q{I|L}{I|L}P{M(Oxidation (M))|F}{I|L}V;[H{I|L}]Q{I|L}P{M(Oxidation (M))|F}{I|L}{I|L}V;[Q{I|L}]H{I|L}{M(Oxidation (M))|F}{I|L}P{I|L}V 6.0989;5.8199;5.3563;5.0772;4.9662;4.9648;4.9437;4.914;4.7982;4.7409 -;-;-;-;-;-;-;-;-;- 651 1 1.948 54554.7 1.0 13934 5311 19246 HBL1_DMSO_200M_050219_2,19247 HBL1_DMSO_200M_050219_2,19247,FLIQHLPLV True True FLIQHLPLV 104.39822 540.333850085735 14664876.0 19246.0 ENST00000424913.5_1_3:176771673-176816307:-|nuORF;;ENST00000430069.5_1_3:176771676-176782752:-|nuORF 5.902421792348226 2.0 True 9.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19259 104.45 800.0 111360.0 25 0 17519.0 + 33973 SLIFKLEEL 9 106 546.3221576167582 1090.6297623003163 2 546.3211547732353 MULTI CID FTMS 0 0 0 19258 55485.57421875 0.3373950746324388 -15 0.1015472412109375 1 Unmodified _SLIFKLEEL_ ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2 55.50274090549119 0.0285720310785888 4 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 3 + 78.364 0.0 0.0 7.1852 7.1852 85.479 0.0 0.0 0.0 40.73908740944319 7.00073708740895 7.00073708740895 5.465978039238735 0 0.8494850021680094 2.0 1.0994850021680094 0.0 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{I|L}E{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}K{I|L}EE{I|L};{[TV]|[{I|L}S]}{I|L}G{M(Oxidation (M))|F}RR{[QD]|[EN]|[WG]|[KD]|[RS]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[TV]|[{I|L}S]}E{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}{I|L}[KA]{[QD]|[EN]|[WG]|[KD]|[RS]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E{I|L}S{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}T]VG{M(Oxidation (M))|F}RR{[QD]|[EN]|[WG]|[KD]|[RS]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[TV]|[{I|L}S]}{I|L}E{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}RR{[QD]|[EN]|[WG]|[KD]|[RS]} 7.1852;6.684;6.2547;3.752;2.7152;2.6567;2.6216;2.2845;2.214;1.7422 -;-;+;-;-;-;-;-;-;- + 1190 + 1 1.948 74624.5 0.3600000143051147 13935 5322 19258 HBL1_DMSO_200M_050219_2,19259 HBL1_DMSO_200M_050219_2,19259,SLIFKLEEL True True SLIFKLEEL 104.45488 546.321154773235 2723059.0 19258.0 ENSG00000080189|ENST00000372230|SLC35C2;;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2 4.343959252039592 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19265 104.48 389.0 389020.0 25 0 17636.0 + 39858 VFIDGPLAL 9 100 944.5442041524044 943.5369276858044 1 944.5441161990166 MULTI CID FTMS 0 0 0 19264 222983.671875 0.201115299253068 43 -0.4748764038085937 1 Unmodified _VFIDGPLAL_ ENSG00000149743|ENST00000317459|TRPT1;ENST00000541928.1_1_11:63991649-63992138:-|nuORF;nc|ENSG00000149743|Q86TN4-2|TRPT1;nc|ENSG00000149743|Q86TN4-3|TRPT1;nc|ENSG00000149743|Q86TN4-4|TRPT1 104.79918948944588 0.0084531067040494 4 [{I|L}P]GADV{M(Oxidation (M))|F}{I|L}{I|L} 9 7 + 63.783 0.0 0.0 6.76 6.76 75.505 0.0 0.0 0.0 13.242115271517385 16.478174818886373 13.242115271517385 0.3959062302381255 0 0.0 1.5228787452803376 1.075257498915995 0.0 [{I|L}P]GADV{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]GDAV{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]AGDV{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]QDV{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]GDV{M(Oxidation (M))|F}A{I|L}{I|L};[{I|L}P]GD{I|L}G{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]ENV{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}P]GAD{I|L}{M(Oxidation (M))|F}V{I|L};[{I|L}P]GDA{I|L}{M(Oxidation (M))|F}V{I|L};[{I|L}P]GAVD{M(Oxidation (M))|F}{I|L}{I|L} 6.76;6.7181;6.6276;6.5791;6.1617;6.0543;6.0025;5.9935;5.9516;5.9096 -;-;-;-;-;-;-;-;-;- 5563 1 1.948 100282.0 1.0 13936 5327 19264 HBL1_DMSO_200M_050219_2,19265 HBL1_DMSO_200M_050219_2,19265,VFIDGPLAL True True VFIDGPLAL 104.48069 944.544116199017 9077786.0 19264.0 ENST00000541928.1_1_11:63991649-63992138:-|nuORF;;ENSG00000149743|ENST00000317459|TRPT1;;nc|ENSG00000149743|Q86TN4-4|TRPT1;;nc|ENSG00000149743|Q86TN4-3|TRPT1;;nc|ENSG00000149743|Q86TN4-2|TRPT1 5.478761990865071 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19272 104.52 695.0 113620.0 25 0 17804.0 + 14911 ILLKDILSV 9 92 507.3347768116788 1012.6550006901576 2 507.3349487185478 MULTI CID FTMS 0 0 0 19271 65961.234375 0.6094120719346974 1 -0.026092529296875 1 Unmodified _ILLKDILSV_ ENSG00000149311|ENST00000675843|ATM 60.07390631473393 0.0260411565414776 4 {I|L}{I|L}DK{I|L}{I|L}{I|L}[VS] 9 2 + 64.024 0.0 0.0 6.3224 6.3224 80.773 0.0 0.0 0.0 15.211892990699384 4.088709367037282 4.088709367037282 4.088709367037282 0 1.0 1.6989700043360187 0.5941876774005248 0.0 {I|L}{I|L}DK{I|L}{I|L}{I|L}[VS];{I|L}{I|L}DK{I|L}SV{I|L}{I|L};{I|L}{I|L}D{I|L}K{I|L}{I|L}[VS];{I|L}{I|L}DKS{I|L}V{I|L}{I|L};{I|L}{I|L}{I|L}DK{I|L}{I|L}[VS];{I|L}{I|L}D{I|L}KSV{I|L}{I|L};{I|L}{I|L}{I|L}KD{I|L}{I|L}[VS];{I|L}{I|L}{I|L}DKSV{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}{I|L}{I|L}[VS];{I|L}{I|L}{I|L}KDSV{I|L}{I|L} 6.3224;5.9186;5.4427;5.4309;5.3475;5.039;4.9998;4.9438;4.8202;4.596 -;-;-;-;-;-;+;-;-;- + 598 1 1.948 64080.8 1.0 13937 5333 19271 HBL1_DMSO_200M_050219_2,19272 HBL1_DMSO_200M_050219_2,19272,ILLKDILSV True True ILLKDILSV 104.51545 507.334948718548 519948.96875 19271.0 ENSG00000149311|ENST00000675843|ATM 4.13469926516215 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19273 104.53 658.0 141550.0 25 0 27441.0 + 14063 IAMDLILKM 9 99 524.2996467805106 1046.584740627821 2 524.3007690310478 MULTI CID FTMS 0 0 0 19271 98051.9296875 0.9589041734324502 1 -0.026092529296875 2 Unmodified _IAMDLILKM_ ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6 75.76082778847304 0.0188720312721366 4 {I|L}AMD{I|L}{I|L}{I|L}KM 9 0 + 90.269 0.0 0.0 8.6251 8.6251 97.249 0.0 0.0 0.0 60.92797333827284 11.962724883926654 11.962724883926654 28.844340914803936 0 2.110924374808178 2.0 0.0 0.2887254899964357 + + {I|L}AMD{I|L}{I|L}{I|L}KM;{I|L}A{[CA]|SS}NA{I|L}{I|L}KM 8.6251;5.869 +;- + 852 + 1 1.948 76132.9 1.0 13938 5333 19271 HBL1_DMSO_200M_050219_2,19273 HBL1_DMSO_200M_050219_2,19273,IAMDLILKM True True IAMDLILKM 104.52692 524.300769031048 748907.625 19271.0 nc|ENSG00000163029|Q96SB8-2|SMC6;;ENSG00000163029|ENST00000448223|SMC6 6.716346263885498 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19276 104.54 78.0 720990.0 25 0 81049.0 + 15333 IPLPLGTVTI 10 79 512.326282416437 1022.638011899674 2 512.3262206912041 MULTI CID FTMS 0 0 0 19275 534838.125 0.7477515444737937 -7 0.050140380859375 1 Unmodified _IPLPLGTVTI_ ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1 70.71552829651908 0.0189135702660538 4 [{I|L}P]GT{I|L}P{I|L}VT{I|L} 10 4 + 59.28 0.0 0.0 5.7967 5.7967 77.434 0.0 0.0 0.0 14.948500216800936 10.307058296214194 10.307058296214194 3.2390874094431865 0 0.8182503180159344 1.5228787452803376 1.924742501084005 0.0 [{I|L}P]GT{I|L}P{I|L}VT{I|L};[{I|L}P]{I|L}PGT{I|L}VT{I|L};[{I|L}P]GT{I|L}PV{I|L}T{I|L};[{I|L}P]{I|L}PG{I|L}TVT{I|L};[{I|L}P]{I|L}P{I|L}GTVT{I|L};[{I|L}P]{I|L}PGTV{I|L}T{I|L};[{I|L}P]GTV[{I|L}P]{I|L}T{I|L};[{I|L}P]{I|L}PG{I|L}S{I|L}T{I|L};[{I|L}P]{I|L}P{I|L}GS{I|L}T{I|L};[{I|L}P]GTVT{I|L}P{I|L}{I|L} 5.7967;5.48;5.3633;5.3509;5.3509;5.0466;4.9449;4.9175;4.9175;4.7888 -;-;-;-;+;-;-;-;-;- + 726 1 1.948 47276.9 1.0 13939 5335 19275 HBL1_DMSO_200M_050219_2,19276 HBL1_DMSO_200M_050219_2,19276,IPLPLGTVTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19277 104.55 800.0 15104.0 25 0 1252.1 -1 0 34 1089.6408913584328 0 1089.641284167767 PEAK CID FTMS 0 0 0 19275 66202.71875 1.0 0 0.0 2 4 M 1 -1 6.9897 0.0 0.0 0.32103 0.0 0.0 889.9423529299532 1153.2530001276002 2043.195353057553 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.32103 - 2 + 1 1.948 16587.6 0.3199999928474426 13940 5335 19275 HBL1_DMSO_200M_050219_2,19277 HBL1_DMSO_200M_050219_2,19277, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19281 104.57 800.0 246800.0 25 0 19740.0 + 34494 SMPLSFPSL 9 94 978.4995650805076 977.4922886139076 1 978.4998046755792 MULTI CID FTMS 0 0 0 19280 124508.71875 0.6120507487265198 -15 0.1028594970703125 1 Unmodified _SMPLSFPSL_ ENSG00000179933|ENST00000319074|C14orf119 115.6920309560759 0.0032017028976397 4 [{I|L}P]SMS{M(Oxidation (M))|F} 6 5 54.235 0.0 0.0 5.5484 0.0 0.0 0.0 312.1604949039126 312.1604949039126 12.80028862885976 0.0 0.0 0.0 0 1.2887254899964358 1.6989700043360187 1.610924374808178 0.0 [{I|L}P]SMS{M(Oxidation (M))|F} 5.5484 - 3358 1 1.948 131146.2 0.7699999809265137 13941 5338 19280 HBL1_DMSO_200M_050219_2,19281 HBL1_DMSO_200M_050219_2,19281,SMPLSFPSL True True SMPLSFPSL 104.57416 978.499804675579 4156707.75 19280.0 ENSG00000179933|ENST00000319074|C14orf119 5.458746115366618 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19282 104.58 563.0 143380.0 25 0 21592.0 + 22489 LPVPAFNVI 9 60 969.5766119743178 968.5693355077176 1 969.5759155154228 MULTI CID FTMS 0 0 0 19280 84720.4453125 0.0144812659541791 90 -0.92059326171875 2 Unmodified _LPVPAFNVI_ ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;nc|ENSG00000074800|P06733-2|ENO1;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000111674|P09104-2|ENO2 60.38955033654506 0.025866396858536 4 [PA]{M(Oxidation (M))|F}NV{I|L}PV{I|L} 9 6 + 60.385 0.0 0.0 6.2345 6.2345 76.142 0.0 0.0 0.0 1.7609125905568137 16.478174818886373 1.7609125905568137 1.7609125905568137 0 0.0 0.0 0.0 1.4802046884880935 [PA]{M(Oxidation (M))|F}NV{I|L}PV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ANV{I|L}PV{I|L};[{I|L}P]V[PA]{M(Oxidation (M))|F}NV{I|L};[PA]{M(Oxidation (M))|F}N{I|L}VPV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AN{I|L}VPV{I|L};[{I|L}P]V{[DS]|[MA]|[CV]|TT}{I|L}NV{I|L};[PA]{M(Oxidation (M))|F}{I|L}PVNV{I|L};[PA]{M(Oxidation (M))|F}{I|L}NVPV{I|L};[{I|L}P]V{[ES]|[DT]|[{I|L}C]}VNV{I|L};[PA]{M(Oxidation (M))|F}NV[VP]{I|L}{I|L} 6.2345;6.0527;4.951;4.9135;4.7317;4.4584;4.3236;4.2419;4.2294;4.1709 -;-;+;-;-;-;-;-;-;- + 648 1 1.948 62437.8 1.0 13942 5338 19280 HBL1_DMSO_200M_050219_2,19282 HBL1_DMSO_200M_050219_2,19282,LPVPAFNVI True True LPVPAFNVI 104.58409 969.575915515423 82518211.0 19280.0 ENSG00000108515|ENST00000519602|ENO3;;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;;nc|ENSG00000111674|P09104-2|ENO2;;ENSG00000111674|ENST00000229277|ENO2;;ENSG00000074800|ENST00000234590|ENO1;;nc|ENSG00000108515|P13929-3|ENO3;;ENST00000464920.1_1_1:8921421-8930582:-|nuORF;;nc|ENSG00000074800|P06733-2|ENO1 5.102691968282064 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19285 104.6 539.0 197730.0 25 0 14407.0 + 24253 MAPLALHLL 9 98 489.793987720988 977.573422508776 2 489.7940856814384 MULTI CID FTMS 0 0 0 19284 145971.28125 0.1763321909500686 35 -0.4135589599609375 1 Unmodified _MAPLALHLL_ chr19:49895180-49895926|48|39.08|0.37|6.73|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1 45.7499826716795 0.0496882803020414 4 {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L} 9 0 + 56.085 0.0 0.0 5.7372 5.7372 74.198 0.0 0.0 0.0 25.450397039808763 12.09614293199344 12.09614293199344 1.7609125905568137 0 0.3054621874040891 2.0 0.0 0.0 + + {[DS]|[MA]|[CV]|TT}P{I|L}A{I|L}H{I|L}{I|L};{[DS]|[MA]|[CV]|TT}{I|L}PA{I|L}H{I|L}{I|L} 5.7372;5.5571 +;- + 272 + 1 1.948 88049.7 1.0 13943 5340 19284 HBL1_DMSO_200M_050219_2,19285 HBL1_DMSO_200M_050219_2,19285,MAPLALHLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19289 104.62 436.0 212310.0 25 0 57791.0 + 24869 MPMNVADLI 9 96 502.25129272282817 1002.4880325124564 2 502.2518188357353 MULTI CID FTMS 0 0 0 19288 194031.171875 0.2812078573012441 29 -0.3662796020507812 1 Unmodified _MPMNVADLI_ ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2 50.855029805455786 0.0384952370514206 4 {NN|[MP]|[D{I|L}]|[EV]}NVADM{I|L}{I|L} 9 2 + 66.951 0.0 0.0 6.6785 6.6785 81.722 0.0 0.0 0.0 21.75173648495437 42.08648790139871 21.75173648495437 3.819459175083608 0 0.8182503180159344 1.6989700043360187 0.3494850021680094 0.5941876774005248 {NN|[MP]|[D{I|L}]|[EV]}NVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MNVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVAMD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVAD{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}MGGVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGVMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}GGMVAD{I|L}{I|L} 6.6785;6.2975;6.2614;6.2491;5.7599;5.7415;5.3863;5.3789;5.3429;5.3306 -;+;-;-;-;-;-;-;-;- + 585 1 1.948 74305.2 1.0 13944 5343 19288 HBL1_DMSO_200M_050219_2,19289 HBL1_DMSO_200M_050219_2,19289,MPMNVADLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19291 104.63 439.0 156390.0 25 0 14546.0 + 29524 QLLNWVYLSL 10 97 624.8518317794264 1247.6891106256528 2 624.8518554568291 MULTI CID FTMS 0 0 0 19290 144488.046875 0.5587050431953757 15 -0.1512985229492187 1 Unmodified _QLLNWVYLSL_ ENSG00000165424|ENST00000372336|ZCCHC24 49.55428908609986 0.0827668555218455 4 [Q{I|L}]{I|L}[WY][VG]G{I|L}S{I|L} 11 3 + 37.928 0.0 0.0 3.0398 3.0398 73.521 0.0 0.0 0.0 3.850071945254904 5.722832546636646 3.850071945254904 8.63952668130868 0 1.5994850021680094 1.2218487496163564 0.0 0.3807196863200844 [Q{I|L}]{I|L}[WY][VG]G{I|L}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K[{I|L}P]{I|L}S{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L};[DN]S{I|L}Q{I|L}[{I|L}P][HV]{I|L};[DN]Q{I|L}S{I|L}[{I|L}P][HV]{I|L};[DN]S{I|L}GA{I|L}[{I|L}P][HV]{I|L};[DN]Q{I|L}{I|L}S[{I|L}P][HV]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K[{I|L}P][YT]G{I|L}S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KH[RV][HD]S{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KH[RV][HS]D{I|L} 3.0398;2.3474;2.1185;2.0433;1.9052;1.802;1.4705;1.1349;0.71679 -;-;-;-;-;-;-;-;- 496 1 1.948 60480.8 1.0 13945 5344 19290 HBL1_DMSO_200M_050219_2,19291 HBL1_DMSO_200M_050219_2,19291,QLLNWVYLSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19294 104.65 800.0 291450.0 25 0 56921.0 + 22594 LPYGFIQEL 9 102 1079.5783299129123 1078.5710534463126 1 1079.578051745892 MULTI CID FTMS 0 0 0 19293 123432.4453125 0.6284925228205831 11 -0.1030197143554687 1 Unmodified _LPYGFIQEL_ ENSG00000130939|ENST00000343090|UBE4B;nc|ENSG00000130939|O95155-2|UBE4B;nc|ENSG00000130939|O95155-3|UBE4B;nc|ENSG00000130939|O95155-4|UBE4B 96.11092074494114 0.0124975504059861 4 [{I|L}P]YG{M(Oxidation (M))|F}{I|L}QE{I|L} 9 0 + 86.864 0.0 0.0 8.0536 8.0536 87.52 0.0 0.0 0.0 5.4761469314082944 16.478174818886373 5.4761469314082944 5.4761469314082944 0 1.4802046884880935 1.6989700043360187 0.3252574989159953 0.6747425010840047 + + [{I|L}P]YG{M(Oxidation (M))|F}{I|L}QE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{M(Oxidation (M))|F}{I|L}{I|L}QE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L}{M(Oxidation (M))|F}{I|L}QE{I|L};[{I|L}P]YG{M(Oxidation (M))|F}Q{I|L}E{I|L};[{I|L}P]YG{M(Oxidation (M))|F}QE{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{M(Oxidation (M))|F}{I|L}QE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{M(Oxidation (M))|F}{I|L}Q{I|L}E{I|L};[{I|L}P]YG{I|L}{M(Oxidation (M))|F}QE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{M(Oxidation (M))|F}{I|L}QE{I|L}{I|L};{I|L}PYQ{I|L}{M(Oxidation (M))|F}GE{I|L} 8.0536;7.5459;7.4051;7.3693;7.2881;6.9627;6.8615;6.8024;6.7804;6.7225 +;-;-;-;-;-;-;-;-;- + 8051 1 1.948 148862.4 0.4300000071525574 13946 5346 19293 HBL1_DMSO_200M_050219_2,19294 HBL1_DMSO_200M_050219_2,19294,LPYGFIQEL True True LPYGFIQEL 104.64952 1079.57805174589 1800437.875 19293.0 nc|ENSG00000130939|O95155-4|UBE4B;;ENSG00000130939|ENST00000343090|UBE4B;;nc|ENSG00000130939|O95155-3|UBE4B;;nc|ENSG00000130939|O95155-2|UBE4B 8.124661127726236 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19296 104.66 195.0 366910.0 25 0 38513.0 + 9573 FLIQHLPLV 9 91 540.3342379433101 1078.65392295342 2 540.3342773318291 MULTI CID FTMS 0 0 0 19295 242017.734375 0.5389123772087944 21 -0.2344894409179687 1 Unmodified _FLIQHLPLV_ ENST00000424913.5_1_3:176771673-176816307:-|nuORF;ENST00000430069.5_1_3:176771676-176782752:-|nuORF 34.40172386719151 0.1061884637610825 4 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L} 6 5 40.45 0.0 0.0 3.7501 0.0 0.0 0.0 324.1913968125238 324.1913968125238 16.32068444291761 0.0 0.0 0.0 0 0.805462187404089 1.0 0.0 0.0 [H{I|L}]Q{I|L}{M(Oxidation (M))|F}{I|L} 3.7501 - 285 1 1.948 63480.5 1.0 13947 5347 19295 HBL1_DMSO_200M_050219_2,19296 HBL1_DMSO_200M_050219_2,19296,FLIQHLPLV True True False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19297 104.67 790.0 288940.0 25 0 61971.0 + 32446 SAFATPFLV 9 97 952.5138615575488 951.5065850909486 1 952.5136596560478 MULTI CID FTMS 0 0 0 19295 154435.3125 0.2242476389683482 -19 0.1688385009765625 2 Unmodified _SAFATPFLV_ ENSG00000127184|ENST00000247655|COX7C;ENST00000511472.5_1_5:85913768-85915283:+|nuORF 154.46347324262513 0.0105605718140094 4 {[MS]|[{M(Oxidation (M))|F}A]}SATP{M(Oxidation (M))|F}{I|L}V 9 2 + 75.345 0.0 0.0 7.9185 7.9185 93.02 0.0 0.0 0.0 2.632192780232785 15.927287092553613 2.632192780232785 10.094923698087044 0 2.055462187404089 0.0 2.425833702434617 0.0 {[MS]|[{M(Oxidation (M))|F}A]}SATP{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}TGTP{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}SATP{I|L}{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TA{M(Oxidation (M))|F}GTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGT[YV]{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}TGTP{I|L}{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NT[YV]{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TSAA{M(Oxidation (M))|F}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS[VS]{M(Oxidation (M))|F}{I|L}V;{[SA]|[TG]}{M(Oxidation (M))|F}ATP{M(Oxidation (M))|F}{I|L}V 7.9185;6.8575;6.6274;5.7674;5.7045;5.5665;5.5251;5.5183;5.5182;5.4062 -;-;-;-;-;-;-;-;-;+ + 4072 1 1.948 150722.2 1.0 13948 5347 19295 HBL1_DMSO_200M_050219_2,19297 HBL1_DMSO_200M_050219_2,19297,SAFATPFLV True True SAFATPFLV 104.66948 952.513659656048 10405418.0 19295.0 ENSG00000127184|ENST00000247655|COX7C;;ENST00000511472.5_1_5:85913768-85915283:+|nuORF 7.83617369333903 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19301 104.69 702.0 70965.0 25 0 2027.4 -1 0 102 872.0662104434842 0 871.6061889529228 PEAK CID FTMS 0 0 0 -1 0 1 4 {I|L}MDAVM 6 -1 27.868 0.0 0.0 1.5997 0.0 0.0 870.7237772328684 208.0731142633422 1078.7968914962107 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}MDAVM 1.5997 - 111 + 1 1.948 40748.3 1.0 13949 5350 19300 HBL1_DMSO_200M_050219_2,19301 HBL1_DMSO_200M_050219_2,19301, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19304 104.71 492.0 235280.0 25 0 33606.0 + 33974 SLIFKLEEL 9 101 546.3221576167582 1090.6297623003163 2 546.3216430544853 MULTI CID FTMS 0 0 0 19303 118433.6953125 0.7201681884271335 15 -0.1836929321289062 1 Unmodified _SLIFKLEEL_ ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2 41.8396318013385 0.0653578398400075 4 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 3 + 78.606 0.0 0.0 7.2074 7.2074 86.725 0.0 0.0 0.0 37.23167186806469 7.243012119929091 7.243012119929091 6.505149978319906 0 0.8494850021680094 2.0 1.1237125054200234 0.0 {[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{I|L}{M(Oxidation (M))|F}{I|L}E{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{I|L}G{M(Oxidation (M))|F}RR{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}{I|L}[KA]{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}T]VG{M(Oxidation (M))|F}RR{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F}RR{[QD]|[EN]|[WG]|[KD]|[RS]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{I|L}[QT][WR];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K{I|L}[QT][WR];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}ERR{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}T][R{M(Oxidation (M))|F}]{I|L}[KA]{[QD]|[EN]|[WG]|[KD]|[RS]} 7.2074;6.6109;3.3303;2.0204;1.5215;1.1059;1.0897;0.91126;0.81365;0.76834 -;-;-;-;-;-;-;-;-;- 1020 + 1 1.948 91628.2 1.0 13950 5352 19303 HBL1_DMSO_200M_050219_2,19304 HBL1_DMSO_200M_050219_2,19304,SLIFKLEEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19307 104.73 800.0 102150.0 25 0 11284.0 + 23490 LTIEDGIFEV 10 96 568.2979379141484 1134.5813228950967 2 568.2980834841728 MULTI CID FTMS 0 0 0 19306 61280.6015625 0.1485516290172808 -12 0.1073684692382812 1 Unmodified _LTIEDGIFEV_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 61.357469665136826 0.0330252915653943 4 {NN|[MP]|[D{I|L}]|[EV]}GT{I|L}E{I|L}E[{M(Oxidation (M))|F}V] 10 6 + 48.368 0.0 0.0 4.2631 4.2631 49.646 0.0 0.0 0.0 0.7660625688767198 7.269987279362624 0.7660625688767198 0.0 0 0.2887254899964357 0.0 2.086696871556164 0.0 {NN|[MP]|[D{I|L}]|[EV]}GT{I|L}E{I|L}E[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}GET{I|L}{I|L}E[{M(Oxidation (M))|F}V];[{I|L}T][DG]{I|L}E{I|L}E[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DGT{I|L}{I|L}E[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}GTE{I|L}{I|L}E[{M(Oxidation (M))|F}V];[{I|L}T][DG]E{I|L}{I|L}E[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}EGT{I|L}{I|L}E[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}GET{I|L}E{I|L}[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}GT{I|L}EE{I|L}[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}[SG]{I|L}E{I|L}E[{M(Oxidation (M))|F}V] 4.2631;4.2631;4.1956;4.167;4.0175;3.95;3.9124;3.7231;3.7231;3.661 -;-;-;-;-;-;-;-;-;- 1578 1 1.948 67989.8 0.3400000035762787 13951 5354 19306 HBL1_DMSO_200M_050219_2,19307 HBL1_DMSO_200M_050219_2,19307,LTIEDGIFEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19311 104.75 766.0 191100.0 25 0 19467.0 + 24871 MPMNVADLI 9 83 1003.4944277581774 1002.4871512915772 1 1003.498217761517 MULTI CID FTMS 0 0 0 19310 127770.8515625 0.1075850572639059 53 -0.6352081298828125 1 Unmodified _MPMNVADLI_ ENSG00000141543|ENST00000649764|EIF4A3;ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2 96.28474662873226 0.0124266067997264 4 {[NV]|[RG]}MPMAD{I|L}{I|L} 9 4 + 85.331 0.0 0.0 8.512 8.512 81.652 0.0 0.0 0.0 1.4473404812020618 11.505149978319906 1.4473404812020618 1.4473404812020618 0 0.2742275032520141 1.3010299956639813 0.6139829889124311 1.5356668758921828 {[NV]|[RG]}MPMAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MNVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NMVAD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}NVMAD{I|L}{I|L};[MN]PMVAD{I|L}{I|L};[MN]PVMAD{I|L}{I|L};{[NV]|[RG]}MPAMD{I|L}{I|L};{[NV]|[RG]}MPADM{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}MGGVAD{I|L}{I|L};[MN]VPMAD{I|L}{I|L} 8.512;8.3676;8.2455;8.166;7.9452;7.8657;7.7186;7.6167;7.449;7.3898 -;+;-;-;-;-;-;-;-;- + 4903 1 1.948 99826.5 1.0 13952 5357 19310 HBL1_DMSO_200M_050219_2,19311 HBL1_DMSO_200M_050219_2,19311,MPMNVADLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19312 104.77 800.0 157140.0 25 0 5864.3 + 3049 AVLEYLTAEI 10 92 1121.6089951006277 1120.6017186340275 1 1121.607348620892 MULTI CID FTMS 0 0 0 19310 93189.8125 0.7646686220106914 6 -0.1013946533203125 2 Unmodified _AVLEYLTAEI_ ENSG00000113648|ENST00000511689|MACROH2A1;ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 65.23502041540118 0.0228537820337083 4 {[QN]|[E{I|L}]|[KN]}YAV{I|L}TAE{I|L} 10 4 + 81.235 0.0 0.0 7.2492 7.2492 83.668 0.0 0.0 0.0 9.273174902439578 16.53212513775344 9.273174902439578 3.935078169319297 0 0.2302046884880938 0.0 1.7544321917401078 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}YAV{I|L}TAE{I|L};{[QN]|[E{I|L}]|[KN]}YAVT{I|L}AE{I|L};{[QN]|[E{I|L}]|[KN]}YAVPAV{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}YAVTA{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}YA{I|L}VTAE{I|L};{[QN]|[E{I|L}]|[KN]}YA{I|L}TVAE{I|L};{[QN]|[E{I|L}]|[KN]}YAT{I|L}VAE{I|L};[YE]{I|L}AV{I|L}TAE{I|L};{[QN]|[E{I|L}]|[KN]}YAVPA{M(Oxidation (M))|F}V{I|L};{[QN]|[E{I|L}]|[KN]}AYV{I|L}TAE{I|L} 7.2492;6.8981;6.6027;6.5708;6.5697;6.4837;6.4484;6.4217;6.4102;6.3977 -;-;-;-;-;-;-;-;-;- 23944 1 1.948 82416.3 0.9200000166893004 13953 5357 19310 HBL1_DMSO_200M_050219_2,19312 HBL1_DMSO_200M_050219_2,19312,AVLEYLTAEI True True AVLEYLTAEI 104.76583 1121.60734862089 1115084.625 19310.0 ENSG00000196747|ENST00000358739|H2AC13;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000276903|ENST00000613174|H2AC16;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000274997|ENST00000377459|H2AC12;;nc|ENSG00000113648|O75367-3|MACROH2A1;;ENSG00000184270|ENST00000331128|H2AC21;;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;;ENSG00000113648|ENST00000511689|MACROH2A1;;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;;ENSG00000180573|ENST00000377791|H2AC6;;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;;nc|ENSG00000246705|Q9BTM1-2|H2AJ;;nc|ENSG00000113648|O75367|MACROH2A1;;ENSG00000246705|ENST00000544848|H2AJ 0.4870933691660563 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19318 104.79 129.0 426880.0 25 0 49339.0 + 15334 IPLPLGTVTI 10 74 512.326282416437 1022.638011899674 2 512.3262817263603 MULTI CID FTMS 0 0 0 19317 345801.84375 0.4834619124168606 20 -0.2838897705078125 1 Unmodified _IPLPLGTVTI_ ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1 70.71552829651908 0.0189135702660538 4 [{I|L}P]{I|L}PGT{I|L}VT{I|L} 10 2 + 64.505 0.0 0.0 6.3077 6.3077 83.311 0.0 0.0 0.0 22.754537344402905 27.97274004902107 22.754537344402905 6.262874945799766 0 0.8182503180159344 1.6989700043360187 1.25 0.0 [{I|L}P]{I|L}PGT{I|L}VT{I|L};[{I|L}P]{I|L}PG{I|L}TVT{I|L};[{I|L}P]GT[{I|L}P]{I|L}VT{I|L};[{I|L}P]GTV{I|L}[{I|L}P]T{I|L};[{I|L}P]{I|L}P{I|L}GTVT{I|L};[{I|L}P]G[{I|L}P]T{I|L}VT{I|L};[{I|L}P]G[{I|L}P]{I|L}TVT{I|L};[{I|L}T][PG][{I|L}P]{I|L}VT{I|L};[{I|L}P]{I|L}[SG]{I|L}[{I|L}P]T{I|L};[{I|L}T][PG]V{I|L}[{I|L}P]T{I|L} 6.3077;5.6953;5.5518;5.3797;5.1065;5.0629;4.4505;3.7957;3.646;3.6236 -;-;-;-;+;-;-;-;-;- + 687 1 1.948 48274.7 1.0 13954 5362 19317 HBL1_DMSO_200M_050219_2,19318 HBL1_DMSO_200M_050219_2,19318,IPLPLGTVTI True True IPLPLGTVTI 104.78709 512.32628172636 21783312.0 19317.0 ENST00000472488.5_1_1:160085570-160106822:+|nuORF;;ENSG00000163399|ENST00000295598|ATP1A1;;nc|ENSG00000163399|P05023-4|ATP1A1;;ENSG00000018625|ENST00000361216|ATP1A2;;nc|ENSG00000163399|P05023-3|ATP1A1 4.257815837860107 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19319 104.8 677.0 266160.0 25 0 24514.0 + -1 VPLEMLEI 8 102 943.5200298981648 0 943.5182983279228 PEAK CID FTMS 0 0 0 19317 151334.625 0.5032678529525407 16 -0.244140625 2 ENSG00000112742|ENST00000369798|TTK;ENST00000430061.2_1_6:80715671-80721208:+|nuORF;nc|ENSG00000112742|P33981-2|TTK 4 {I|L}{M(Oxidation (M))|F}{I|L}MVE 6 -1 36.514 0.0 0.0 1.9371 0.0 0.0 942.513948647119 207.11409937076408 1149.6280480178832 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1643943297944483 0.0 {I|L}{M(Oxidation (M))|F}{I|L}MVE 1.9371 - 2968 + 1 1.948 121450.7 1.0 13955 5362 19317 HBL1_DMSO_200M_050219_2,19319 HBL1_DMSO_200M_050219_2,19319, False False VPLEMLEI 104.79889 943.518298327923 2703668.5 19317.0 ENSG00000112742|ENST00000369798|TTK;;ENST00000430061.2_1_6:80715671-80721208:+|nuORF;;nc|ENSG00000112742|P33981-2|TTK 2.9454046885172525 1.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19320 104.81 800.0 69391.0 25 0 7723.3 -1 TLVLCECAHA 10 74 587.272537295634 1172.530521658068 2 587.2724487185478 MULTI CID FTMS 0 0 0 19317 103728.0 0.6941579448065032 -2 0.0079498291015625 3 2 Carbamidomethyl (C) _TLVLC(Carbamidomethyl (C))EC(Carbamidomethyl (C))AHA_ ENST00000331222.5_2_8:1733235-1733967:+|nuORF 9.38312468134398 0.6832340498775793 4 [{I|L}T]V{M(Oxidation (M))|F} 4 -1 27.964 0.0 0.0 2.3849 0.0 0.0 0.0 709.297814378311 709.297814378311 9.38039076304328 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [{I|L}T]V{M(Oxidation (M))|F} 2.3849 - 115 + 1 1.948 43652.7 0.3600000143051147 13956 5362 19317 HBL1_DMSO_200M_050219_2,19320 HBL1_DMSO_200M_050219_2,19320,TLVLCECAHA False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19321 104.82 628.0 75700.0 25 0 10036.0 + 21695 LPLRFACLL 9 73 523.3167748994908 0 523.3174926638603 PEAK CID FTMS 0 0 0 19317 96312.203125 1.0 0 0.0 4 Unmodified _LPLRFACLL_ REV__ENSG00000154736|ENST00000284987|ADAMTS5 16.942295170755138 0.2326366549411506 4 P{I|L} 2 -1 15.217 0.0 0.0 1.4567 0.0 0.0 113.08499177298444 718.376080330746 831.4610721037305 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L} 1.4567 + + 63 + 1 1.948 43700.2 1.0 13957 5362 19317 HBL1_DMSO_200M_050219_2,19321 HBL1_DMSO_200M_050219_2,19321,LPLRFACLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19322 104.84 800.0 69575.0 25 0 9360.7 23724 LTVFWMDFV 9 75 579.2889184909469 1156.5632840486935 2 579.2889282107353 MULTI CID FTMS 0 0 0 19317 88956.1171875 0.8309134201430837 -2 0.0079498291015625 5 Unmodified _LTVFWMDFV_ ENST00000330374.6_1_X:150577718-150577775:+|nuORF 21.74664581756881 0.2544899275067181 4 {I|L}T{I|L}ED 5 6 65.701 0.0 0.0 5.6807 0.0 0.0 0.0 582.2561044457792 582.2561044457792 35.96401568399578 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 {I|L}T{I|L}ED 5.6807 - 285 + 1 1.948 48822.4 0.3300000131130218 13958 5362 19317 HBL1_DMSO_200M_050219_2,19322 HBL1_DMSO_200M_050219_2,19322,LTVFWMDFV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19325 104.86 800.0 177520.0 25 0 13328.0 + 1684 ALPEILFAKV 10 113 550.8394930912998 1099.6644332493995 2 550.8395263552666 MULTI CID FTMS 0 0 0 19324 114195.46875 0.3951905401404029 -20 0.2229843139648437 1 Unmodified _ALPEILFAKV_ ENSG00000160683|ENST00000292174|CXCR5;nc|ENSG00000160683|P32302-2|CXCR5 57.72198328787511 0.0425618229276495 4 [{I|L}A]PE{I|L}{I|L}{M(Oxidation (M))|F}AKV 10 0 + 83.692 0.0 0.0 7.6107 7.6107 86.797 0.0 0.0 0.0 16.674763388842678 13.521825181113629 13.521825181113629 5.669467896306145 0 1.079689690656103 1.6989700043360187 0.6694451763165201 0.4876954943324545 + + [{I|L}A]PE{I|L}{I|L}{M(Oxidation (M))|F}AKV;[{I|L}A]PE{I|L}{I|L}{M(Oxidation (M))|F}KAV;[EP]{I|L}{I|L}{M(Oxidation (M))|F}AKV[{I|L}A];[EP]{I|L}{I|L}A{M(Oxidation (M))|F}KV[{I|L}A];[EP]{I|L}A{I|L}{M(Oxidation (M))|F}KV[{I|L}A];[EP]{I|L}{M(Oxidation (M))|F}{I|L}AKV[{I|L}A];[EP]{I|L}A{M(Oxidation (M))|F}{I|L}KV[{I|L}A];[EP]{I|L}{M(Oxidation (M))|F}A{I|L}KV[{I|L}A];[EP]A{I|L}{I|L}{M(Oxidation (M))|F}KV[{I|L}A];[{I|L}A]PE{I|L}{M(Oxidation (M))|F}KV[{I|L}A] 7.6107;7.0951;4.6683;4.6219;4.5291;4.3834;4.188;3.9959;3.7606;3.6817 +;-;-;-;-;-;-;-;-;- + 2433 + 1 1.948 117409.4 0.7599999904632568 13959 5364 19324 HBL1_DMSO_200M_050219_2,19325 HBL1_DMSO_200M_050219_2,19325,ALPEILFAKV True True ALPEILFAKV 104.85797 550.839526355267 7146023.5 19324.0 nc|ENSG00000160683|P32302-2|CXCR5;;ENSG00000160683|ENST00000292174|CXCR5 6.861003239949544 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19326 104.87 800.0 102190.0 25 0 10952.0 -1 IFLCMDMF 8 97 546.7319264905174 1091.4493000478346 2 546.7316772341728 MULTI CID FTMS 0 0 0 19324 103001.5859375 1.0 0 0.0 2 Carbamidomethyl (C),Oxidation (M) _IFLC(Carbamidomethyl (C))M(Oxidation (M))DMF_ ENST00000557685.5_1_14:90263589-90390924:-|nuORF 20.871210003555333 0.6025813472596342 4 {I|L}{M(Oxidation (M))|F}E{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7 -1 29.953 0.0 0.0 2.7443 0.0 0.0 200.93946723852795 0.0 200.93946723852795 0.0 -4.66113029490927 -4.66113029490927 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}{M(Oxidation (M))|F}E{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.7443 - 330 + 1 1.948 66751.1 0.3700000047683716 13960 5364 19324 HBL1_DMSO_200M_050219_2,19326 HBL1_DMSO_200M_050219_2,19326,IFLCMDMF False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19331 104.9 800.0 126330.0 25 0 26311.0 + 36151 SVVDIKLLL 9 98 500.3265051203545 998.638457307509 2 500.3263427615166 MULTI CID FTMS 0 0 0 19330 80297.296875 0.5990351144169708 -6 0.10211181640625 1 Unmodified _SVVDIKLLL_ ENSG00000100359|ENST00000248929|SGSM3;ENST00000478085.5_1_22:40800171-40802852:+|nuORF;nc|ENSG00000100359|Q96HU1-2|SGSM3 47.594388314883695 0.0456443387682827 4 [VS]VD{I|L}K{I|L}{I|L}{I|L} 9 0 + 63.84 0.0 0.0 6.3927 6.3927 88.671 0.0 0.0 0.0 37.43568650046075 10.043797142072409 10.043797142072409 10.638429459400044 0 2.052887198244136 2.0 0.0 0.0 + + [VS]VD{I|L}K{I|L}{I|L}{I|L};[VS]VA{I|L}V[VS]{I|L}{I|L};[VS]VAV{I|L}[VS]{I|L}{I|L};[VS]VA{I|L}{I|L}[TA]{I|L}{I|L};[VS]VA{I|L}[TA]{I|L}{I|L}{I|L};[VS]VAV[VS]{I|L}{I|L}{I|L};[DV]{I|L}K{I|L}[VS]{I|L}{I|L};{I|L}{I|L}KDV[VS]{I|L}{I|L};[K{I|L}]{I|L}DV[VS]{I|L}{I|L};[DV][VS]{I|L}K{I|L}{I|L}{I|L} 6.3927;5.3274;4.8254;4.676;4.3745;3.8725;3.4339;3.2148;3.139;2.9364 +;-;-;-;-;-;-;-;-;- + 883 + 1 1.948 81072.2 0.6700000166893005 13961 5368 19330 HBL1_DMSO_200M_050219_2,19331 HBL1_DMSO_200M_050219_2,19331,SVVDIKLLL True True SVVDIKLLL 104.90037 500.326342761517 2156693.5 19330.0 ENST00000478085.5_1_22:40800171-40802852:+|nuORF;;ENSG00000100359|ENST00000248929|SGSM3;;nc|ENSG00000100359|Q96HU1-2|SGSM3 3.0374457836151123 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19332 104.91 800.0 12662.0 25 0 1656.3 -1 0 26 1131.607348620892 0 1131.607348620892 PEAK CID FTMS 0 0 0 -1 0 2 4 D 1 -1 6.9897 0.0 0.0 0.30911 0.0 0.0 927.6977772204968 1215.4550264947875 2143.1528037152843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.30911 - 2 + 1 1.948 19287.7 0.4000000059604645 13962 5368 19330 HBL1_DMSO_200M_050219_2,19332 HBL1_DMSO_200M_050219_2,19332, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19333 104.93 800.0 104320.0 25 0 11850.0 + 32447 SAFATPFLV 9 98 952.5138615575488 951.5065850909486 1 954.5190307497978 MULTI CID FTMS 0 0 0 19330 89438.609375 0.6849531164740909 1 -0.0579299926757812 3 Unmodified _SAFATPFLV_ ENSG00000127184|ENST00000247655|COX7C;ENST00000511472.5_1_5:85913768-85915283:+|nuORF 28.486842064014134 0.1687311288560894 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}C 4 6 27.669 0.0 0.0 2.9079 0.0 0.0 0.0 488.2678760093384 488.2678760093384 -1.5004019237169288 0.0 -1.5004019237169288 0.0 0 0.0 1.3979400086720375 0.2887254899964357 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}C 2.9079 - 694 1 1.948 61627.1 0.8399999737739563 13963 5368 19330 HBL1_DMSO_200M_050219_2,19333 HBL1_DMSO_200M_050219_2,19333,SAFATPFLV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19334 104.94 800.0 99512.0 25 0 7864.4 + 34495 SMPLSFPSL 9 72 978.4995650805076 977.4922886139076 1 979.5023071169852 MULTI CID FTMS 0 0 0 19330 85338.0 0.6206660961881352 13 -0.1540603637695312 4 Unmodified _SMPLSFPSL_ ENSG00000179933|ENST00000319074|C14orf119 71.13359017698441 0.0206607516130725 4 [{I|L}P]S{M(Oxidation (M))|F}SN[WK] 8 6 + 56.59 0.0 0.0 5.7894 5.7894 85.643 0.0 0.0 0.0 21.760912590556813 4.164317917986224 4.164317917986224 9.262137858390815 0 0.0 1.6989700043360187 1.674742501084005 0.0 [{I|L}P]S{M(Oxidation (M))|F}SN[WK];[{I|L}P]S{M(Oxidation (M))|F}SGG[WK];[PS]{I|L}{M(Oxidation (M))|F}SN[WK];[PS]{I|L}{M(Oxidation (M))|F}SGG[WK];[WK]NS{M(Oxidation (M))|F}P{[TV]|[{I|L}S]};[{I|L}P]CC[KT][WK];[WR]R{M(Oxidation (M))|F}[WQ];{[QN]|[E{I|L}]|[KN]}{[CT]|[{M(Oxidation (M))|F}G]}{[ES]|[DT]|[{I|L}C]}P{[TV]|[{I|L}S]} 5.7894;4.8418;3.5632;2.6156;2.332;1.6503;0.58895;0.37909 -;-;-;-;-;-;-;- 537 1 1.948 59649.6 0.8799999952316284 13964 5368 19330 HBL1_DMSO_200M_050219_2,19334 HBL1_DMSO_200M_050219_2,19334,SMPLSFPSL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19338 104.96 452.0 309220.0 25 0 29296.0 + 10080 FPSEDILLV 9 82 1032.5629651472716 1031.5556886806717 1 1032.561816394329 MULTI CID FTMS 0 0 0 19337 213944.1875 1.0 0 0.0 1 Unmodified _FPSEDILLV_ ENSG00000121350|ENST00000240651|PYROXD1 85.35673624503755 0.0162188719545379 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SED{I|L}{I|L}{I|L}V 9 0 + 81.961 0.0 0.0 7.9453 7.9453 93.534 0.0 0.0 0.0 19.392653074926045 33.42091903442871 19.392653074926045 11.588709367037282 0 0.0 1.6989700043360187 1.7346368802282015 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SED{I|L}{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SED{I|L}{I|L}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}M{I|L}{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}P{M(Oxidation (M))|F}{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}P{I|L}{M(Oxidation (M))|F}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}P{I|L}{I|L}{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}M{I|L}{I|L}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}{I|L}M{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}P{M(Oxidation (M))|F}{I|L}V{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}{I|L}P{M(Oxidation (M))|F}{I|L}V 7.9453;6.8219;6.1536;5.808;5.5162;5.0302;5.0302;4.9653;4.6846;4.6735 +;-;-;-;-;-;-;-;-;- + 1732 1 1.948 96631.1 1.0 13965 5371 19337 HBL1_DMSO_200M_050219_2,19338 HBL1_DMSO_200M_050219_2,19338,FPSEDILLV True True FPSEDILLV 104.9607 1032.56181639433 59278312.0 19337.0 ENSG00000121350|ENST00000240651|PYROXD1 4.785764853159587 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19339 104.97 800.0 13258.0 25 0 1298.5 -1 0 30 1148.448291003704 0 1148.448291003704 PEAK CID FTMS 0 0 0 -1 0 2 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.948 18798.9 0.3600000143051147 13966 5371 19337 HBL1_DMSO_200M_050219_2,19339 HBL1_DMSO_200M_050219_2,19339, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19341 104.98 125.0 357700.0 25 0 38416.0 + 23491 LTIEDGIFEV 10 74 568.2979379141484 1134.5813228950967 2 568.2978393435478 MULTI CID FTMS 0 0 0 19340 353086.90625 0.8559255909819041 6 -0.0514907836914062 1 Unmodified _LTIEDGIFEV_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 25.399314129420983 0.3980215340001851 4 {[QN]|[E{I|L}]|[KN]}DGT{I|L} 6 6 35.596 0.0 0.0 3.1373 0.0 0.0 0.0 503.2516469519905 503.2516469519905 5.356668758921828 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.424742501084005 0.0 {[QN]|[E{I|L}]|[KN]}DGT{I|L} 3.1373 - 340 1 1.948 40780.6 1.0 13967 5372 19340 HBL1_DMSO_200M_050219_2,19341 HBL1_DMSO_200M_050219_2,19341,LTIEDGIFEV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19342 104.99 800.0 104730.0 25 0 16092.0 + 32492 SALEGLPLI 9 83 912.5392924876222 911.5320160210222 1 912.5403930544852 MULTI CID FTMS 0 0 0 19340 69914.796875 0.5270744008736539 -23 0.3010101318359375 2 Unmodified _SALEGLPLI_ ENSG00000119929|ENST00000370476|CUTC 92.8221339359638 0.0138398038803217 4 {[QN]|[E{I|L}]|[KN]}GTG{I|L}P{I|L}{I|L} 9 4 + 67.281 0.0 0.0 7.3811 7.3811 86.432 0.0 0.0 0.0 6.144141363238646 52.85671285634184 6.144141363238646 5.848396689760101 0 1.113982988912431 0.0 1.9308845489566888 0.0 {[QN]|[E{I|L}]|[KN]}GTG{I|L}P{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}GSA{I|L}P{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}{I|L}P{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}G[{I|L}A]SP{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]SP{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[KA]EP{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}G[{I|L}P]{[SA]|[TG]}{I|L}{I|L} 7.3811;6.7395;4.9895;4.3448;3.6476;3.5608;1.2347 -;-;-;-;-;-;- 334 1 1.948 64610.8 0.3300000131130218 13968 5372 19340 HBL1_DMSO_200M_050219_2,19342 HBL1_DMSO_200M_050219_2,19342,SALEGLPLI True True SALEGLPLI 104.99358 912.540393054485 2410139.5 19340.0 ENSG00000119929|ENST00000370476|CUTC 4.629341125488281 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19346 105.02 800.0 16973.0 25 0 3496.6 -1 0 31 1039.822192370892 0 1039.822192370892 PEAK CID FTMS 0 0 0 -1 0 1 4 Y 1 -1 3.9794 0.0 0.0 0.19154 0.0 0.0 815.7871326892467 1095.7589815729127 1911.54611426216 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.19154 - 1 + 1 1.948 17917.7 0.3499999940395355 13969 5375 19345 HBL1_DMSO_200M_050219_2,19346 HBL1_DMSO_200M_050219_2,19346, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19353 105.05 800.0 195910.0 25 0 35366.0 + 32456 SAFPFPVTV 9 87 964.5136056399864 963.5063291733862 1 964.5141479372978 MULTI CID FTMS 0 0 0 19352 154492.953125 0.0859703560552358 36 -0.373687744140625 1 Unmodified _SAFPFPVTV_ ENSG00000127526|ENST00000595753|SLC35E1 103.74828524460852 0.0090107942103208 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SA{M(Oxidation (M))|F}PVTV 9 4 + 79.425 0.0 0.0 8.2433 8.2433 87.39 0.0 0.0 0.0 4.978882258621695 14.973024840566469 4.978882258621695 4.978882258621695 0 1.1989700043360187 1.5228787452803376 1.8595756168365016 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SA{M(Oxidation (M))|F}PVTV;[VP]T[HD]PVTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PVTG{M(Oxidation (M))|F}TV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PVT{M(Oxidation (M))|F}GTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YAAPVTV;[VP]TV{[{M(Oxidation (M))|F}C]|[YS]}VTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{[SA]|[TG]}PVTV;[VP]T[WY]VTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AA{M(Oxidation (M))|F}PVTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SAVP{M(Oxidation (M))|F}TV 8.2433;7.7266;6.4788;6.4093;6.3511;6.2452;6.1994;6.1977;6.1676;6.0073 -;-;-;-;-;-;-;-;-;- 1188 1 1.948 108970.2 0.4799999892711639 13970 5381 19352 HBL1_DMSO_200M_050219_2,19353 HBL1_DMSO_200M_050219_2,19353,SAFPFPVTV True True SAFPFPVTV 105.05448 964.514147937298 16368792.0 19352.0 ENSG00000127526|ENST00000595753|SLC35E1 8.361538410186768 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19354 105.07 647.0 33267.0 25 0 4987.2 -1 0 50 1104.498559487276 2206.982566041352 2 1105.497119128704 MULTI CID FTMS 0 0 0 19352 93054.8515625 1.0 0 0.0 2 4 {[TV]|[{I|L}S]}AADTAS 8 -1 27.713 0.0 0.0 1.2557 0.0 0.0 0.0 1487.6210907818397 1487.6210907818397 19.61426266193144 0.0 0.0 0.0 0 0.0 1.0 0.8494850021680094 0.0 {[TV]|[{I|L}S]}AADTAS 1.2557 - 60 1 1.948 23718.2 1.0 13971 5381 19352 HBL1_DMSO_200M_050219_2,19354 HBL1_DMSO_200M_050219_2,19354, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19357 105.08 429.0 207200.0 25 0 33925.0 + 12572 GVIDLIFEKA 10 95 552.8189717872465 1103.6233906412929 2 552.8192016482353 MULTI CID FTMS 0 0 0 19356 121513.2421875 0.1312026745017979 -18 0.1978683471679687 1 Unmodified _GVIDLIFEKA_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 83.42873516780209 0.014257832770272 4 [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA] 10 0 + 102.57 0.0 0.0 9.2941 9.2941 96.083 0.0 0.0 0.0 60.687339429602346 21.46443904252783 21.46443904252783 13.679067360440612 0 1.566901560044258 2.0 0.7302046884880937 1.41944517631652 + + [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA];[VG]{I|L}D{I|L}{M(Oxidation (M))|F}{I|L}E[KA];[VG]{I|L}D{I|L}{M(Oxidation (M))|F}[KA]{[QN]|[E{I|L}]|[KN]};[VG]{I|L}[{M(Oxidation (M))|F}V]E{I|L}E[KA];[VG]{I|L}[{M(Oxidation (M))|F}V][KA]E{[QN]|[E{I|L}]|[KN]};R{I|L}[{M(Oxidation (M))|F}V]{[QS]|[NT]}R[KA];[VG]{I|L}[{M(Oxidation (M))|F}V]{[QS]|[NT]}{I|L}{[QN]|[E{I|L}]|[KN]};[VG]{I|L}[{M(Oxidation (M))|F}V]E[KA]{[QN]|[E{I|L}]|[KN]} 9.2941;8.0546;5.5564;4.3464;2.1926;1.9833;1.9613;1.8481 +;-;-;-;-;-;-;- + 699 + 1 1.948 70499.1 1.0 13972 5383 19356 HBL1_DMSO_200M_050219_2,19357 HBL1_DMSO_200M_050219_2,19357,GVIDLIFEKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19360 105.1 800.0 59237.0 25 0 6070.2 + -1 DLLPDEEMPV 10 76 587.272537295634 1172.530521658068 2 587.2720825076103 MULTI CID FTMS 0 0 0 19359 40393.09375 0.2703145432465333 21 -0.23834228515625 1 Oxidation (M) _DLLPDEEM(Oxidation (M))PV_ REV__ENSG00000175727|ENST00000319080|MLXIP;REV__ENST00000538061.1_12:122614496-122617938:+|nuORF;REV__nc|ENSG00000175727|Q9HAP2-3|MLXIP 13.90604991867851 0.6142120002215601 4 VE 2 -1 28.711 0.0 0.0 2.4487 0.0 0.0 0.0 941.3924268971432 941.3924268971432 16.721675119240516 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.0 VE 2.4487 - 56 + 1 1.948 41648.4 0.3300000131130218 13973 5385 19359 HBL1_DMSO_200M_050219_2,19360 HBL1_DMSO_200M_050219_2,19360,DLLPDEEMPV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19361 105.11 800.0 247200.0 25 0 34825.0 + 44289 YLLPAIVHI 9 85 519.8208642297665 1037.6271755263328 2 519.8210937380791 MULTI CID FTMS 0 0 0 19359 109862.2578125 0.0475952802587837 -33 0.3876800537109375 2 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 45.7499826716795 0.0496882803020414 4 [Y{I|L}]{I|L}PA{I|L}V{I|L}H 9 2 + 58.782 0.0 0.0 5.6651 5.6651 71.943 0.0 0.0 0.0 17.97567716725348 0.7255066714861158 0.7255066714861158 0.7255066714861158 0 0.7134679910804405 2.0 0.0 0.0 [Y{I|L}]{I|L}PA{I|L}V{I|L}H;[Y{I|L}]{I|L}PA{I|L}VH{I|L};[Y{I|L}]{I|L}{I|L}[PA]V{I|L}H;[Y{I|L}]{I|L}{I|L}[PA]VH{I|L};[H{I|L}]VAP{I|L}{I|L}Y{I|L};[HV]{I|L}AP{I|L}{I|L}Y{I|L};[PA]{I|L}{I|L}VH{I|L}Y{I|L};[PA]{I|L}[HV]{I|L}{I|L}Y{I|L};[{I|L}P]A{I|L}VH{I|L}Y{I|L};[{I|L}P]A[HV]{I|L}{I|L}Y{I|L} 5.6651;5.5951;4.3178;4.2479;2.785;2.785;2.4508;2.1877;1.991;1.7279 -;+;-;-;-;-;-;-;-;- + 350 + 1 1.948 152245.2 0.8899999856948853 13974 5385 19359 HBL1_DMSO_200M_050219_2,19361 HBL1_DMSO_200M_050219_2,19361,YLLPAIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19363 105.12 187.0 431230.0 25 0 37815.0 + 1685 ALPEILFAKV 10 88 550.8394930912998 1099.6644332493995 2 550.8396484255791 MULTI CID FTMS 0 0 0 19362 236422.09375 0.8181741005392341 2 -0.011566162109375 1 Unmodified _ALPEILFAKV_ ENSG00000160683|ENST00000292174|CXCR5;nc|ENSG00000160683|P32302-2|CXCR5 43.77239144664712 0.1177314611616471 4 [{I|L}A]PE{I|L}{I|L}{M(Oxidation (M))|F}AKV 10 0 + 70.672 0.0 0.0 6.4267 6.4267 92.897 0.0 0.0 0.0 23.092218221507537 10.457574905606748 10.457574905606748 70.67200662681415 0 0.7302046884880937 1.6989700043360187 0.3807196863200844 0.0 + + [{I|L}A]PE{I|L}{I|L}{M(Oxidation (M))|F}AKV 6.4267 + + 333 + 1 1.948 68340.4 1.0 13975 5386 19362 HBL1_DMSO_200M_050219_2,19363 HBL1_DMSO_200M_050219_2,19363,ALPEILFAKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19367 105.15 800.0 17776.0 25 0 2182.7 -1 0 30 1147.961352527142 0 1147.961352527142 PEAK CID FTMS 0 0 0 -1 0 1 4 G 1 -1 5.4846 0.0 0.0 0.23909 0.0 0.0 1090.3901600329966 1143.4742875408333 2233.86444757383 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.23909 - 2 + 1 1.948 17706.2 0.3400000035762787 13976 5389 19366 HBL1_DMSO_200M_050219_2,19367 HBL1_DMSO_200M_050219_2,19367, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19369 105.16 800.0 119060.0 25 0 25607.0 + 36152 SVVDIKLLL 9 92 500.3265051203545 998.638457307509 2 500.3268920779228 MULTI CID FTMS 0 0 0 19368 78300.9296875 0.5841417855861881 16 -0.1760635375976562 1 Unmodified _SVVDIKLLL_ ENSG00000100359|ENST00000248929|SGSM3;ENST00000478085.5_1_22:40800171-40802852:+|nuORF;nc|ENSG00000100359|Q96HU1-2|SGSM3 51.629811660486645 0.0367964933207742 4 [VS]VD{I|L}[K{I|L}]{I|L}{I|L} 9 0 + 60.773 0.0 0.0 6.0856 6.0856 77.283 0.0 0.0 0.0 2.7473594786049205 2.7473594786049205 2.7473594786049205 2.7473594786049205 0 1.8226825097560424 2.0 0.3494850021680094 0.0 + + [VS]VD{I|L}[K{I|L}]{I|L}{I|L};[VS]VA{I|L}V[VS]{I|L}{I|L};[VS]VAV{I|L}[VS]{I|L}{I|L};[VS]VA{I|L}{I|L}[TA]{I|L}{I|L};[VS]{I|L}{I|L}GV[VS]{I|L}{I|L};{I|L}{I|L}KDV[VS]{I|L}{I|L};[DV]{I|L}K{I|L}[VS]{I|L}{I|L};[K{I|L}]{I|L}DV[VS]{I|L}{I|L};[VS]{I|L}{I|L}G{I|L}[TA]{I|L}{I|L};{I|L}{I|L}KD{I|L}[TA]{I|L}{I|L} 6.0856;5.8105;5.2445;5.1591;3.8883;3.8107;3.7895;3.6097;3.2369;3.1593 +;-;-;-;-;-;-;-;-;- + 884 + 1 1.948 75624.5 0.3300000131130218 13977 5390 19368 HBL1_DMSO_200M_050219_2,19369 HBL1_DMSO_200M_050219_2,19369,SVVDIKLLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19372 105.18 800.0 163590.0 25 0 16518.0 + + 18764 MALELLRI 8 84 479.79147189552856 957.5683908578573 2 479.7914001345634 MULTI CID FTMS 0 0 0 19371 123246.96875 0.2295701681829109 -15 0.1445159912109375 1 Unmodified _LAMELLLR_ ENST00000492566.1_1_2:114202545-114202572:+|nuORF 63.562846038646086 0.116059504757595 4 MA{I|L}E{I|L}{I|L}R{I|L} 8 -1 + 95.66 0.0 0.0 9.9899 9.9899 90.677 0.0 0.0 0.0 56.53003171804024 16.146387799684874 16.146387799684874 6.505149978319906 0 1.3494850021680094 2.0 0.4247425010840047 0.9604093769761874 MA{I|L}E{I|L}{I|L}R{I|L};MA{I|L}{I|L}E{I|L}R{I|L};M{I|L}AE{I|L}{I|L}R{I|L};M{I|L}A{I|L}E{I|L}R{I|L} 9.9899;9.3105;7.5869;6.9075 -;-;-;- 233 + 1 1.948 105080.7 0.8999999761581421 13978 5392 19371 HBL1_DMSO_200M_050219_2,19372 HBL1_DMSO_200M_050219_2,19372,LAMELLLR False False MALELLRI 105.18302 479.791400134563 7385745.0 19371.0 ENST00000492566.1_1_2:114202545-114202572:+|nuORF 3.899345477422079 2.0 False 8.0 True nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19373 105.2 800.0 184940.0 25 0 37166.0 + 32448 SAFATPFLV 9 98 952.5138615575488 951.5065850909486 1 952.5170776247978 MULTI CID FTMS 0 0 0 19371 146995.0625 0.2134440314978466 26 -0.2489852905273437 2 Unmodified _SAFATPFLV_ ENSG00000127184|ENST00000247655|COX7C;ENST00000511472.5_1_5:85913768-85915283:+|nuORF 117.59872219059416 0.0024691254995583 4 {[SA]|[TG]}{M(Oxidation (M))|F}ATP{M(Oxidation (M))|F}{I|L}V 9 0 + 70.274 0.0 0.0 7.3855 7.3855 82.47 0.0 0.0 0.0 3.0102999566398125 14.62189282359298 3.0102999566398125 3.0102999566398125 0 1.6549471895720984 0.0 2.370371515030528 0.0 + + {[SA]|[TG]}{M(Oxidation (M))|F}ATP{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}SATP{M(Oxidation (M))|F}{I|L}V;[TA]{M(Oxidation (M))|F}GTP{M(Oxidation (M))|F}{I|L}V;{[MS]|[{M(Oxidation (M))|F}A]}TGTP{M(Oxidation (M))|F}{I|L}V;{[SA]|[TG]}{M(Oxidation (M))|F}ATP{I|L}{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TA{M(Oxidation (M))|F}GTV;{[MS]|[{M(Oxidation (M))|F}A]}SATP{I|L}{M(Oxidation (M))|F}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NT[YV]{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TA{M(Oxidation (M))|F}SAV;[TA]{M(Oxidation (M))|F}GTP{I|L}{M(Oxidation (M))|F}V 7.3855;7.0691;6.8366;6.5202;6.0135;5.7999;5.6971;5.6413;5.5538;5.4646 +;-;-;-;-;-;-;-;-;- + 5659 1 1.948 104078.5 0.4699999988079071 13979 5392 19371 HBL1_DMSO_200M_050219_2,19373 HBL1_DMSO_200M_050219_2,19373,SAFATPFLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19376 105.22 800.0 141190.0 25 0 13833.0 + 22601 LPYHIYPFI 9 105 581.8187384301995 1161.6229239271988 2 581.8185302615166 MULTI CID FTMS 0 0 0 19375 84248.7109375 0.723763976580132 1 -0.0164718627929687 1 Unmodified _LPYHIYPFI_ ENSG00000109929|ENST00000264027|SC5D 39.957323273325 0.0756908302845263 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{I|L}YP{M(Oxidation (M))|F}{I|L} 9 2 + 74.619 0.0 0.0 6.4237 6.4237 75.804 0.0 0.0 0.0 2.085521743960328 16.478174818886373 2.085521743960328 1.2371250542002343 0 1.774227503252014 0.9208187539523752 0.3054621874040891 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{I|L}YP{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}Y{I|L}P{M(Oxidation (M))|F}{I|L};[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}YP{M(Oxidation (M))|F}{I|L};[H{I|L}]{M(Oxidation (M))|F}{I|L}Y{I|L}P{M(Oxidation (M))|F}{I|L};[H{I|L}]YP{I|L}YP{M(Oxidation (M))|F}{I|L};[H{I|L}]YPY{I|L}P{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{I|L}YM{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}Y{I|L}M{I|L}{I|L};[H{I|L}]Y{I|L}PYP{M(Oxidation (M))|F}{I|L};[H{I|L}]{M(Oxidation (M))|F}{I|L}{I|L}YM{I|L}{I|L} 6.4237;6.3172;6.2442;6.1377;6.0926;5.9861;5.6473;5.5408;5.4909;5.4678 -;-;-;-;-;-;-;-;-;- 2310 1 1.948 92569.5 0.9900000095367432 13980 5394 19375 HBL1_DMSO_200M_050219_2,19376 HBL1_DMSO_200M_050219_2,19376,LPYHIYPFI True True LPYHIYPFI 105.21731 581.818530261517 1104293.375 19375.0 ENSG00000109929|ENST00000264027|SC5D 4.867690881093343 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19379 105.24 665.0 246380.0 25 0 21233.0 + 10081 FPSEDILLV 9 88 1032.5629651472716 1031.5556886806717 1 1032.560839831829 MULTI CID FTMS 0 0 0 19378 146177.765625 0.6832518673824686 25 -0.2071990966796875 1 Unmodified _FPSEDILLV_ ENSG00000121350|ENST00000240651|PYROXD1 74.42276476219924 0.019389277360085 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SED{I|L}{I|L}{I|L}V 9 0 + 81.437 0.0 0.0 7.8946 7.8946 94.802 0.0 0.0 0.0 19.665762445130497 39.604093769761874 19.665762445130497 16.890019164509255 0 0.0 2.0 1.7614393726401687 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SED{I|L}{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}M{I|L}{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}P{M(Oxidation (M))|F}{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}P{I|L}{M(Oxidation (M))|F}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}{I|L}M{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S[{I|L}P]{M(Oxidation (M))|F}{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}{I|L}P{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[MT]D{I|L}{I|L}{I|L}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[CP]|[EA]}P{I|L}{I|L}{M(Oxidation (M))|F}V;{I|L}{I|L}DESM{I|L}{I|L}V 7.8946;6.2572;5.9116;5.6198;5.2661;5.0067;4.9743;4.7984;4.7209;4.5282 +;-;-;-;-;-;-;-;-;- + 2361 1 1.948 107047.1 1.0 13981 5396 19378 HBL1_DMSO_200M_050219_2,19379 HBL1_DMSO_200M_050219_2,19379,FPSEDILLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19381 105.25 718.0 82649.0 25 0 7488.2 + 23492 LTIEDGIFEV 10 89 568.2979379141484 1134.5813228950967 2 568.2983276247978 MULTI CID FTMS 0 0 0 19380 62711.40625 0.1520200735448187 31 -0.24273681640625 1 Unmodified _LTIEDGIFEV_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 46.020951573049366 0.1035046897853725 4 {NN|[MP]|[D{I|L}]|[EV]}GET{I|L}{I|L}E[{M(Oxidation (M))|F}V] 10 6 + 44.501 0.0 0.0 3.9223 3.9223 71.85 0.0 0.0 0.0 4.649611104363061 7.269987279362624 4.649611104363061 4.488474775526186 0 0.3054621874040891 0.0 1.989651828710444 0.0 {NN|[MP]|[D{I|L}]|[EV]}GET{I|L}{I|L}E[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}GE{I|L}T{I|L}E[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DGT{I|L}{I|L}E[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}EGT{I|L}{I|L}E[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}G{I|L}TE{I|L}E[{M(Oxidation (M))|F}V];{[QN]|[E{I|L}]|[KN]}DG{I|L}T{I|L}E[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}EG{I|L}T{I|L}E[{M(Oxidation (M))|F}V];[{I|L}T][PS]TE{I|L}E[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}G[VP]{M(Oxidation (M))|F}{I|L}E[{M(Oxidation (M))|F}V];{NN|[MP]|[D{I|L}]|[EV]}G{I|L}ET{I|L}E[{M(Oxidation (M))|F}V] 3.9223;3.5266;3.5124;3.5017;3.2969;3.1168;3.1061;3.0896;2.8038;2.7426 -;-;-;-;-;-;-;-;-;- 671 1 1.948 51841.5 1.0 13982 5397 19380 HBL1_DMSO_200M_050219_2,19381 HBL1_DMSO_200M_050219_2,19381,LTIEDGIFEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19382 105.26 405.0 187790.0 25 0 31409.0 + 32493 SALEGLPLI 9 72 912.5392924876222 911.5320160210222 1 912.542041003704 MULTI CID FTMS 0 0 0 19380 112439.03125 0.8476565431043855 2 -0.026336669921875 2 Unmodified _SALEGLPLI_ ENSG00000119929|ENST00000370476|CUTC 97.07464715276576 0.0121042244793311 4 {[QN]|[E{I|L}]|[KN]}GTG{I|L}P{I|L}{I|L} 9 4 + 66.626 0.0 0.0 7.3093 7.3093 86.343 0.0 0.0 0.0 4.137342758552691 23.75833099041856 4.137342758552691 6.020599913279618 0 1.110924374808178 0.0 1.947621246364342 0.0 {[QN]|[E{I|L}]|[KN]}GTG{I|L}P{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}ASG{I|L}P{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}{I|L}P{I|L}{I|L};[{I|L}P]G[R{M(Oxidation (M))|F}]P{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}AKEP{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}G{I|L}ASP{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}AVASP{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[Q{I|L}]SP{I|L}{I|L} 7.3093;6.6488;5.8312;5.641;5.2471;5.2412;4.5807;4.1808 -;-;-;-;-;-;-;- 335 1 1.948 54980.1 1.0 13983 5397 19380 HBL1_DMSO_200M_050219_2,19382 HBL1_DMSO_200M_050219_2,19382,SALEGLPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19386 105.28 403.0 141230.0 25 0 14331.0 + 32592 SAVGLNVFL 9 84 919.5246210654232 918.5173445988232 1 919.5262939333916 MULTI CID FTMS 0 0 0 19385 101294.359375 0.670214872109633 5 -0.0521926879882812 1 Unmodified _SAVGLNVFL_ ENSG00000153037|ENST00000505459|SRP19;ENST00000503445.5_1_5:112196986-112217695:+|nuORF;ENST00000506997.1_1_5:112198279-112227311:+|nuORF;ENST00000512790.5_1_5:112197073-112227301:+|nuORF;nc|ENSG00000153037|P09132-2|SRP19 74.92900055777586 0.0191935851694334 4 {[NV]|[RG]}T{I|L}NV{M(Oxidation (M))|F}{I|L} 8 3 + 83.027 0.0 0.0 9.0392 9.0392 85.348 0.0 0.0 0.0 3.0102999566398125 16.40978057358332 3.0102999566398125 3.0102999566398125 0 0.6549471895720985 0.0 1.7856668758921828 1.3494850021680094 {[NV]|[RG]}T{I|L}NV{M(Oxidation (M))|F}{I|L};[KG]E{I|L}NV{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}NV{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{I|L}NV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}GS{I|L}NV{M(Oxidation (M))|F}{I|L};{[NV]|[RG]}T{I|L}GGV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}SG{I|L}NV{M(Oxidation (M))|F}{I|L};[KG]E{I|L}GGV{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}S{I|L}GGV{M(Oxidation (M))|F}{I|L};{[NV]|[RG]}T{I|L}N{M(Oxidation (M))|F}V{I|L} 9.0392;8.7115;8.5198;8.192;8.0501;8.0308;7.7224;7.7031;7.5114;7.3721 -;-;-;-;-;-;-;-;-;- 1002 1 1.948 43194.0 1.0 13984 5400 19385 HBL1_DMSO_200M_050219_2,19386 HBL1_DMSO_200M_050219_2,19386,SAVGLNVFL True True SAVGLNVFL 105.27579 919.526293933392 1227248.625 19385.0 ENST00000503445.5_1_5:112196986-112217695:+|nuORF;;ENST00000512790.5_1_5:112197073-112227301:+|nuORF;;ENSG00000153037|ENST00000505459|SRP19;;nc|ENSG00000153037|P09132-2|SRP19;;ENST00000506997.1_1_5:112198279-112227311:+|nuORF 4.946492989857991 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19389 105.3 800.0 146350.0 25 0 5932.1 + 22816 IPNFDVREIVNNI 13 114 771.9174163582302 1541.8202797832605 2 771.9180175662041 MULTI CID FTMS 0 0 0 19388 80849.8359375 0.4455145469266976 -20 0.2140655517578125 1 Unmodified _LRFWNIYLDFR_ nc|ENSG00000131747|P11388-4|TOP2A;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A 4.189502756095605 0.855381588458882 4 {I|L}PMMV{I|L}[RD]D{M(Oxidation (M))|F}{I|L} 11 7 76.623 0.0 0.0 4.9697 0.0 0.0 0.0 208.0728701227172 208.0728701227172 44.89677886608884 0.0 0.0 0.0 0 1.75 1.5228787452803376 0.0 1.5994850021680094 {I|L}PMMV{I|L}[RD]D{M(Oxidation (M))|F}{I|L} 4.9697 - 7607 + 1 1.948 85539.3 0.3600000143051147 13985 5402 19388 HBL1_DMSO_200M_050219_2,19389 HBL1_DMSO_200M_050219_2,19389,LRFWNIYLDFR False False IPNFDVREIVNNI 105.29624 771.918017566204 3705253.75 19388.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 6.071399211883545 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19390 105.31 800.0 101470.0 25 0 11298.0 + 1231 AIIPEGGLFTV 11 97 558.8189225006572 1115.6232920681143 2 558.8184692263603 MULTI CID FTMS 0 0 0 19388 98903.140625 0.9481309624221268 -3 0.0179061889648437 2 Unmodified _AIIPEGGLFTV_ ENST00000563686.5_1_18:52942938-53070719:-|nuORF 49.93300154707207 0.1180010809391383 4 [EP]GG{I|L}{M(Oxidation (M))|F}TV 8 3 45.738 0.0 0.0 4.0997 0.0 0.0 0.0 312.1918917227975 312.1918917227975 9.055107746263182 0.0 0.0 0.0 0 0.0 0.958607314841775 0.8807196863200843 0.0 + [EP]GG{I|L}{M(Oxidation (M))|F}TV 4.0997 + + 933 1 1.948 70388.1 0.3600000143051147 13986 5402 19388 HBL1_DMSO_200M_050219_2,19390 HBL1_DMSO_200M_050219_2,19390,AIIPEGGLFTV True True AIIPEGGLFTV 105.31008 558.81846922636 891419.8125 19388.0 ENST00000563686.5_1_18:52942938-53070719:-|nuORF 5.1421098709106445 2.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19395 105.33 59.0 1173500.0 25 0 205300.0 + 12573 GVIDLIFEKA 10 71 552.8189717872465 1103.6233906412929 2 552.8188964724541 MULTI CID FTMS 0 0 0 19394 788741.3125 0.8516353265463593 5 -0.0531082153320312 1 Unmodified _GVIDLIFEKA_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 49.52724829834842 0.0829255630816734 4 [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA] 10 0 + 82.254 0.0 0.0 7.4531 7.4531 96.354 0.0 0.0 0.0 46.05651869704872 10.522562268522575 10.522562268522575 82.25440627993265 0 1.1549471895720984 2.0 0.3807196863200844 0.3252574989159953 + + [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA] 7.4531 + + 340 + 1 1.948 60204.5 1.0 13987 5406 19394 HBL1_DMSO_200M_050219_2,19395 HBL1_DMSO_200M_050219_2,19395,GVIDLIFEKA True True GVIDLIFEKA 105.32706 552.818896472454 22435825.5 19394.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 8.878042380015055 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19396 105.34 800.0 71887.0 25 0 11414.0 + -1 MFNLGQSCDLL 11 64 657.2988654281335 1312.5831779230668 2 657.2996703982353 MULTI CID FTMS 0 0 0 19394 71188.8828125 0.4346014335845375 -22 0.2424087524414062 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))FNLGQSC(Carbamidomethyl (C))DLL_ REV__ENST00000251849.8_1_3:12625734-12625989:-|nuORF 19.361941925380144 0.6323962752489956 4 D[NP]Y{M(Oxidation (M))|F}{I|L}{I|L} 7 -1 50.093 0.0 0.0 3.8164 0.0 0.0 432.1493092267594 0.0 432.1493092267594 0.0 32.39023842381954 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.3807196863200844 D[NP]Y{M(Oxidation (M))|F}{I|L}{I|L} 3.8164 - 103 1 1.948 56362.2 0.3199999928474426 13988 5406 19394 HBL1_DMSO_200M_050219_2,19396 HBL1_DMSO_200M_050219_2,19396,MFNLGQSCDLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19397 105.34 187.0 525820.0 25 0 25693.0 -1 0 105 857.0665607672831 2568.1778529020494 3 857.4013549685478 MULTI CID FTMS 0 0 0 19394 195390.671875 0.414344850538012 -14 0.155609130859375 3 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 49.931 0.0 0.0 1.9442 0.0 0.0 0.0 1527.5647193753184 1527.5647193753184 32.72935632555205 0.0 0.0 0.0 0 1.0 1.154901959985743 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9442 - 1321 1 1.948 73627.2 1.0 13989 5406 19394 HBL1_DMSO_200M_050219_2,19397 HBL1_DMSO_200M_050219_2,19397, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19400 105.35 25.0 3636400.0 25 0 479170.0 + 44290 YLLPAIVHI 9 75 519.8208642297665 1037.6271755263328 2 519.8211547732353 MULTI CID FTMS 0 0 0 19399 1822690.375 0.7896384158713524 -10 0.0907135009765625 1 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 45.7499826716795 0.0496882803020414 4 [Y{I|L}]{I|L}PA{I|L}V[H{I|L}] 9 0 + 53.623 0.0 0.0 5.1679 5.1679 84.786 0.0 0.0 0.0 24.193926987836534 4.762036441594191 4.762036441594191 13.979400086720368 0 0.7302046884880937 2.0 0.0 0.0 + + [Y{I|L}]{I|L}PA{I|L}V[H{I|L}];[Y{I|L}]{I|L}{I|L}[PA]V[H{I|L}];[HV]{I|L}AP{I|L}{I|L}[Y{I|L}];[H{I|L}]VAP{I|L}{I|L}[Y{I|L}];[PA]{I|L}{I|L}VH{I|L}[Y{I|L}];[PA]{I|L}[HV]{I|L}{I|L}[Y{I|L}];[{I|L}P]A{I|L}VH{I|L}[Y{I|L}];[{I|L}P]A[HV]{I|L}{I|L}[Y{I|L}] 5.1679;3.8206;2.6301;2.4604;2.1703;1.7867;1.59;1.2065 +;-;-;-;-;-;-;- + 215 + 1 1.948 75459.4 1.0 13990 5408 19399 HBL1_DMSO_200M_050219_2,19400 HBL1_DMSO_200M_050219_2,19400,YLLPAIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19401 105.37 800.0 155040.0 25 0 31014.0 + 22225 LPREILNLI 9 114 540.8426744524085 1079.6707959716168 2 540.8423950076103 MULTI CID FTMS 0 0 0 19399 83039.7734375 0.5921435166661708 -16 0.1819381713867187 2 Unmodified _LPREILNLI_ ENSG00000163428|ENST00000295628|LRRC58 38.17557092003332 0.0854718145212029 4 [{I|L}P]RE{I|L}{I|L}N{I|L}{I|L} 9 0 + 62.628 0.0 0.0 5.8007 5.8007 76.191 0.0 0.0 0.0 9.145698046753736 16.478174818886373 9.145698046753736 2.768024924119672 0 0.9247425010840048 0.8239087409443188 0.0 0.6382104921644451 + + [{I|L}P]RE{I|L}{I|L}N{I|L}{I|L};[{I|L}P]RE{I|L}N{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}{I|L}N{I|L}{I|L};[{I|L}P]RE{I|L}{I|L}GG{I|L}{I|L};[{I|L}P]RE{I|L}VQ{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[RP]{I|L}N{I|L}{I|L}{I|L};[{I|L}P]RE{I|L}GG{I|L}{I|L}{I|L};[VP]W{I|L}{I|L}{I|L}N{I|L}{I|L};[{I|L}P]RE{I|L}{I|L}{I|L}N{I|L};[VP]W{I|L}{I|L}N{I|L}{I|L}{I|L} 5.8007;5.5443;4.9536;4.9478;4.9169;4.6972;4.6914;4.4735;4.3665;4.2171 +;-;-;-;-;-;-;-;-;- + 1137 1 1.948 97897.6 0.8299999833106995 13991 5408 19399 HBL1_DMSO_200M_050219_2,19401 HBL1_DMSO_200M_050219_2,19401,LPREILNLI True True LPREILNLI 105.36722 540.84239500761 3090442.75 19399.0 ENSG00000163428|ENST00000295628|LRRC58 2.735788027445475 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19410 105.41 800.0 197510.0 25 0 12134.0 + + 14061 VAADAVASLLI 11 86 1042.6136014292538 1041.6063249626538 1 1042.613940417767 MULTI CID FTMS 0 0 0 19409 107938.8671875 0.6594200899503284 -2 0.0079727172851562 1 Unmodified _IALSGDALVAI_ ENSG00000126264|ENST00000246551|HCST;nc|ENSG00000126264|Q9UBK5-2|HCST 53.832793166522166 0.0964040679835549 4 [Q{I|L}]DAVTVA{I|L}{I|L} 10 -1 + 68.919 0.0 0.0 6.6167 6.6167 74.531 0.0 0.0 0.0 1.7609125905568137 16.53212513775344 1.7609125905568137 0.2237030067185941 0 0.0 0.0 2.555462187404089 0.0 [Q{I|L}]DAVTVA{I|L}{I|L};[Q{I|L}]DAVTAV{I|L}{I|L};[Q{I|L}]DAVATV{I|L}{I|L};[Q{I|L}]DAVTG{I|L}{I|L}{I|L};[Q{I|L}]DAVAS{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAVTVA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAVTAV{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAVATV{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAVTG{I|L}{I|L}{I|L};[Q{I|L}]DAVT{I|L}G{I|L}{I|L} 6.6167;6.5952;6.5732;6.5444;6.5224;6.4476;6.4261;6.4042;6.3753;6.3539 -;-;-;-;-;-;-;-;-;- 10710 1 1.948 104522.5 0.4399999976158142 13992 5416 19409 HBL1_DMSO_200M_050219_2,19410 HBL1_DMSO_200M_050219_2,19410,IALSGDALVAI False False VAADAVASLLI 105.41177 1042.61394041777 1233338.125 19409.0 ENSG00000126264|ENST00000246551|HCST;;nc|ENSG00000126264|Q9UBK5-2|HCST -0.0034398635228474 1.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19414 105.42 111.0 518570.0 25 0 46849.0 + 39566 VCLLERLI 8 61 479.79147189552856 957.5683908578573 2 479.7913696169853 MULTI CID FTMS 0 0 0 19413 418515.65625 0.779562455506589 12 -0.0754241943359375 1 Unmodified _VCLLERLI_ REV__ENSG00000151689|ENST00000392329|INPP1;REV__ENST00000417336.5_1_2:191224783-191231435:+|nuORF;REV__ENST00000422454.5_1_2:191224783-191229864:+|nuORF;REV__ENST00000487628.1_1_2:191224783-191227442:+|nuORF 26.88365393820708 0.4786498634179528 4 MA{I|L}E{I|L}{I|L}[R{I|L}] 8 -1 + 79.87 0.0 0.0 8.3409 8.3409 84.425 0.0 0.0 0.0 55.43305028184122 4.6040937697618745 4.6040937697618745 3.0102999566398125 0 0.9247425010840048 2.0 0.4247425010840047 0.0 MA{I|L}E{I|L}{I|L}[R{I|L}];MA{I|L}{I|L}E{I|L}[R{I|L}];M{I|L}AE{I|L}{I|L}[R{I|L}];M{I|L}A{I|L}E{I|L}[R{I|L}] 8.3409;8.0266;5.4944;5.18 -;-;-;- 77 + 1 1.948 48794.4 1.0 13993 5419 19413 HBL1_DMSO_200M_050219_2,19414 HBL1_DMSO_200M_050219_2,19414,VCLLERLI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19417 105.44 595.0 174340.0 25 0 29927.0 + 10005 FPLDAFQEI 9 74 1079.5391313940274 1078.5318549274275 1 1079.542407214642 MULTI CID FTMS 0 0 0 19416 118859.4765625 0.8797851068596232 14 -0.0950927734375 1 Unmodified _FPLDAFQEI_ ENSG00000145736|ENST00000274400|GTF2H2;ENSG00000183474|ENST00000380729|GTF2H2C;ENST00000508065.7_1_5:69716099-69743177:+|nuORF 79.59630418116434 0.0176145593575188 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DA{M(Oxidation (M))|F}QE{I|L} 9 0 + 85.371 0.0 0.0 7.9155 7.9155 84.79 0.0 0.0 0.0 22.632192780232785 46.09169289089246 22.632192780232785 3.564921830680703 0 1.0356668758921828 1.6989700043360187 1.1861818737241734 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DA{M(Oxidation (M))|F}QE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DA{M(Oxidation (M))|F}Q{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DAQ{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DAQE{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DAQ{M(Oxidation (M))|F}{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DA{M(Oxidation (M))|F}[AG]E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DA{M(Oxidation (M))|F}[AG]{I|L}E;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DAQE{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}DA[AG]{M(Oxidation (M))|F}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}QE{I|L} 7.9155;7.585;7.4507;7.2997;7.1201;7.0618;6.7312;6.2986;6.2953;6.0493 +;-;-;-;-;-;-;-;-;- + 3595 1 1.948 75061.8 1.0 13994 5421 19416 HBL1_DMSO_200M_050219_2,19417 HBL1_DMSO_200M_050219_2,19417,FPLDAFQEI True True FPLDAFQEI 105.44165 1079.54240721464 2428907.0 19416.0 ENST00000508065.7_1_5:69716099-69743177:+|nuORF;;ENSG00000183474|ENST00000380729|GTF2H2C;;ENSG00000145736|ENST00000274400|GTF2H2 3.1667703439792 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19418 105.45 729.0 276620.0 25 0 41179.0 + 27 AAAPLLPMI 9 88 896.527439451809 895.5201629852089 1 896.5272704958916 MULTI CID FTMS 0 0 0 19416 163271.078125 0.8659237765578587 4 -0.0376739501953125 2 Unmodified _AAAPLLPMI_ ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-6|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693|LPIN1 67.41302359171755 0.0220989861905124 4 [{I|L}P]A{I|L}AAPM{I|L} 9 5 + 64.096 0.0 0.0 7.1574 7.1574 60.876 0.0 0.0 0.0 19.366130211356065 46.247293946369794 19.366130211356065 0.0 0 0.805462187404089 1.2218487496163564 0.0 0.0 [{I|L}P]A{I|L}AAPM{I|L};[{I|L}P]{I|L}AAAPM{I|L};[{I|L}P]AAA{I|L}PM{I|L};[{I|L}P]AA{I|L}APM{I|L};[{I|L}P]{[NV]|[RG]}{I|L}PM{I|L};[{I|L}P]{I|L}{[NV]|[RG]}PM{I|L};[{I|L}P][KT]PPM{I|L};{[NV]|[RG]}{I|L}P{I|L}PM{I|L};[{I|L}P]AAAMP{I|L}{I|L};{[NV]|[RG]}P{I|L}{I|L}PM{I|L} 7.1574;7.1574;6.9637;6.9096;5.5993;5.2091;4.9647;4.8702;4.8592;4.6735 -;-;-;-;-;-;-;-;-;- 651 1 1.948 137245.9 1.0 13995 5421 19416 HBL1_DMSO_200M_050219_2,19418 HBL1_DMSO_200M_050219_2,19418,AAAPLLPMI True True AAAPLLPMI 105.45432 896.527270495892 1700248.0 19416.0 nc|ENSG00000134324|Q14693|LPIN1;;nc|ENSG00000134324|Q14693-4|LPIN1;;nc|ENSG00000134324|Q14693-5|LPIN1;;nc|ENSG00000134324|Q14693-7|LPIN1;;nc|ENSG00000134324|Q14693-6|LPIN1;;ENSG00000134324|ENST00000674199|LPIN1;;nc|ENSG00000134324|Q14693-2|LPIN1 5.710391362508138 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19426 105.49 347.0 240350.0 25 0 11352.0 + 24695 MMVGDLLEV 9 87 1006.491603418176 1005.484326951576 1 1006.488574206829 MULTI CID FTMS 0 0 0 19425 112087.09375 0.5588939693208669 -16 0.0990753173828125 1 Unmodified _MMVGDLLEV_ ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A 97.07464715276576 0.0121042244793311 4 {[{M(Oxidation (M))|F}D]|MM}[RD]{I|L}{I|L}EV 8 2 + 66.833 0.0 0.0 6.6468 6.6468 78.187 0.0 0.0 0.0 7.001962355242952 9.827796776480469 7.001962355242952 1.972805581256196 0 0.5796896906561032 1.2218487496163564 1.341129063296272 0.0 {[{M(Oxidation (M))|F}D]|MM}[RD]{I|L}{I|L}EV;{[{M(Oxidation (M))|F}D]|MM}V[DG]{I|L}{I|L}EV;{[{M(Oxidation (M))|F}D]|MM}[RP]M{I|L}EV;{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))M{I|L}{I|L}EV;{I|L}{I|L}DGMVMEV;{[QN]|[E{I|L}]|[KN]}GCM{I|L}{I|L}EV;{I|L}{I|L}DGVMMEV;{[{M(Oxidation (M))|F}D]|MM}[RD]{I|L}{I|L}PM;{NN|[MP]|[D{I|L}]|[EV]}ACM{I|L}{I|L}EV;{I|L}{I|L}DGMMVEV 6.6468;6.4506;5.9688;5.9504;5.8646;5.7542;5.7403;5.6694;5.63;5.5652 -;+;-;-;-;-;-;-;-;- + 6440 1 1.948 61320.3 1.0 13996 5428 19425 HBL1_DMSO_200M_050219_2,19426 HBL1_DMSO_200M_050219_2,19426,MMVGDLLEV True True MMVGDLLEV 105.4872 1006.48857420683 1306872.125 19425.0 ENSG00000073614|ENST00000399788|KDM5A;;nc|ENSG00000073614|P29375-2|KDM5A 3.6193789641062417 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19430 105.51 800.0 24386.0 25 0 3898.7 -1 0 42 1100.850634753704 0 1100.850634753704 PEAK CID FTMS 0 0 0 -1 0 1 4 {I|L}A 2 -1 10.969 0.0 0.0 0.49867 0.0 0.0 1345.199303099402 667.3499239557249 2012.5492270551267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A 0.49867 - 14 + 1 1.948 23273.5 0.3600000143051147 13997 5431 19429 HBL1_DMSO_200M_050219_2,19430 HBL1_DMSO_200M_050219_2,19430, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19437 105.54 483.0 208070.0 25 0 8691.5 -1 LLCLLLYYCRR 11 113 771.9174163582302 1541.8202797832605 2 771.9169189333916 MULTI CID FTMS 0 0 0 19436 121621.046875 0.6701800314987965 15 -0.0937652587890625 1 2 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))LLLYYC(Carbamidomethyl (C))RR_ ENSG00000148468|ENST00000378116|FAM171A1 8.745405648335112 0.8338865417133445 4 {I|L}P[{M(Oxidation (M))|F}T]{I|L}{I|L}[RD]{I|L}MN 11 -1 68.088 0.0 0.0 4.416 0.0 0.0 0.0 225.0887240045532 225.0887240045532 29.64684906444686 0.0 0.0 0.0 0 1.1307196863200843 1.6989700043360187 0.0 1.5501648626366045 {I|L}P[{M(Oxidation (M))|F}T]{I|L}{I|L}[RD]{I|L}MN 4.416 - 5399 + 1 1.948 72069.4 1.0 13998 5437 19436 HBL1_DMSO_200M_050219_2,19437 HBL1_DMSO_200M_050219_2,19437,LLCLLLYYCRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19447 105.58 214.0 269860.0 25 0 44113.0 + 12574 GVIDLIFEKA 10 64 552.8189717872465 1103.6233906412929 2 552.8189575076103 MULTI CID FTMS 0 0 0 19446 220621.828125 0.2382141516626709 45 -0.3210372924804687 1 Unmodified _GVIDLIFEKA_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 43.9818466556824 0.1155196613165264 4 [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA] 10 0 + 83.575 0.0 0.0 7.5728 7.5728 96.652 0.0 0.0 0.0 46.12781577388333 10.522562268522575 10.522562268522575 83.57509072285026 0 1.110924374808178 2.0 0.3807196863200844 0.3252574989159953 + + [VG]{I|L}D{I|L}{I|L}{M(Oxidation (M))|F}E[KA] 7.5728 + + 291 + 1 1.948 51560.4 1.0 13999 5446 19446 HBL1_DMSO_200M_050219_2,19447 HBL1_DMSO_200M_050219_2,19447,GVIDLIFEKA True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19449 105.6 800.0 89766.0 25 0 11731.0 + -1 CCLTEEWFLL 10 73 657.2988654281335 1312.5831779230668 2 657.2997314333916 MULTI CID FTMS 0 0 0 19448 119631.90625 0.730341535147279 19 -0.1314849853515625 1 Carbamidomethyl (C) _C(Carbamidomethyl (C))CLTEEWFLL_ REV__ENST00000550746.5_1_12:72316987-72317041:+|nuORF 20.453626601364224 0.5043500229302764 4 D[NP]Y{M(Oxidation (M))|F}{I|L}{I|L} 7 -1 49.226 0.0 0.0 3.7503 0.0 0.0 432.1506520001969 0.0 432.1506520001969 0.0 30.096594672570586 0.0 0.0 0 0.5 0.0 1.0994850021680094 0.0 D[NP]Y{M(Oxidation (M))|F}{I|L}{I|L} 3.7503 - 231 1 1.948 65764.1 0.4099999964237213 14000 5447 19448 HBL1_DMSO_200M_050219_2,19449 HBL1_DMSO_200M_050219_2,19449,CCLTEEWFLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19451 105.61 200.0 360030.0 25 0 24371.0 -1 0 90 857.0665607672831 2568.1778529020494 3 857.4009277224541 MULTI CID FTMS 0 0 0 19450 260740.828125 0.5529261884504209 28 -0.181549072265625 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 52.29 0.0 0.0 2.0361 0.0 0.0 0.0 1527.5641424586972 1527.5641424586972 36.45365019512084 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.0361 - 772 1 1.948 56238.0 1.0 14001 5448 19450 HBL1_DMSO_200M_050219_2,19451 HBL1_DMSO_200M_050219_2,19451, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19453 105.61 47.0 1559400.0 25 0 223360.0 + 44291 YLLPAIVHI 9 63 519.8208642297665 1037.6271755263328 2 519.8210937380791 MULTI CID FTMS 0 0 0 19452 979149.875 0.4241940193466116 31 -0.190093994140625 1 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 36.46614268402704 0.0948557732959553 4 [Y{I|L}]{I|L}PA{I|L}V[H{I|L}] 9 0 + 50.569 0.0 0.0 4.8735 4.8735 83.807 0.0 0.0 0.0 30.268024924119665 4.762036441594191 4.762036441594191 14.94850021680093 0 0.4247425010840047 2.0 0.0 0.0 + + [Y{I|L}]{I|L}PA{I|L}V[H{I|L}];[Y{I|L}]{I|L}{I|L}[PA]V[H{I|L}] 4.8735;3.4328 +;- + 130 + 1 1.948 61049.0 1.0 14002 5449 19452 HBL1_DMSO_200M_050219_2,19453 HBL1_DMSO_200M_050219_2,19453,YLLPAIVHI True True YLLPAIVHI 105.61048 519.821093738079 78609280.0 19452.0 ENST00000432525.5_1_22:38886367-38903636:-|nuORF;;nc|ENSG00000100201|Q92841-1|DDX17;;ENSG00000108654|ENST00000225792|DDX5;;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;;ENSG00000100201|ENST00000403230|DDX17;;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;;nc|ENSG00000100201|Q92841-3|DDX17;;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;;nc|ENSG00000100201|Q92841-2|DDX17 5.448074658711751 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19454 105.62 382.0 135970.0 25 0 27742.0 20957 LNKGVPQVLI 10 88 540.8426744524085 1079.6707959716168 2 540.8424560427666 MULTI CID FTMS 0 0 0 19452 102231.078125 0.7289936810710792 25 -0.1395721435546875 2 Unmodified _LNKGVPQVLI_ ENSG00000206384|ENST00000358511|COL6A6;nc|ENSG00000206384|A6NMZ7-2|COL6A6 37.97399986684836 0.1789611706409123 4 {I|L}N{I|L}{I|L}{I|L} 5 6 46.3 0.0 0.0 4.2883 0.0 0.0 495.2808094709 0.0 495.2808094709 0.0 30.8103844862778 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.75 {I|L}N{I|L}{I|L}{I|L} 4.2883 - 141 1 1.948 45717.8 1.0 14003 5449 19452 HBL1_DMSO_200M_050219_2,19454 HBL1_DMSO_200M_050219_2,19454,LNKGVPQVLI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19458 105.64 800.0 113440.0 25 0 15831.0 + 41317 VPIFPQPLI 9 80 512.3155244371379 1022.616495941076 2 512.3150512576103 MULTI CID FTMS 0 0 0 19457 85882.9453125 0.1967035062734955 -52 0.3594512939453125 1 Unmodified _VPIFPQPLI_ ENSG00000164896|ENST00000297532|FASTK;ENST00000460980.5_1_7:150773814-150775027:-|nuORF;ENST00000466855.1_1_7:150774601-150775027:-|nuORF;ENST00000467237.5_1_7:150774601-150776190:-|nuORF;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;nc|ENSG00000164896|Q14296-4|FASTK 42.96799951952854 0.0591636306142405 4 [{I|L}P]{M(Oxidation (M))|F}VPQ 6 5 48.689 0.0 0.0 4.7613 0.0 0.0 0.0 338.2086655666495 338.2086655666495 32.49159686636801 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 [{I|L}P]{M(Oxidation (M))|F}VPQ 4.7613 - 246 1 1.948 89268.2 0.8100000023841858 14004 5452 19457 HBL1_DMSO_200M_050219_2,19458 HBL1_DMSO_200M_050219_2,19458,VPIFPQPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19468 105.68 372.0 200690.0 25 0 25070.0 -1 0 106 312.1699641048231 622.3253752764463 2 312.1693298220634 MULTI CID FTMS 0 0 0 19467 117570.9453125 0.3972937652802441 -1 0.004058837890625 1 4 S 1 -1 1.9897 0.0 0.0 0.31972 0.0 0.0 310.2069803563275 222.0661104791625 532.27309083549 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.31972 - 9 + 1 1.948 66515.0 1.0 14005 5461 19467 HBL1_DMSO_200M_050219_2,19468 HBL1_DMSO_200M_050219_2,19468, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19471 105.7 800.0 210060.0 25 0 15829.0 + 1267 AIMGSGILGL 10 100 931.5313398107352 930.524063344135 1 931.5281860232352 MULTI CID FTMS 0 0 0 19470 127530.671875 0.6044137659746979 -22 0.1337203979492187 1 Unmodified _AIMGSGILGL_ ENSG00000017483|ENST00000620913|SLC38A5;ENSG00000111371|ENST00000398637|SLC38A1;ENSG00000139209|ENST00000266579|SLC38A4;ENSG00000139974|ENST00000267488|SLC38A6;ENSG00000188338|ENST00000614032|SLC38A3;ENST00000497336.1_1_X:48316945-48325440:-|nuORF;ENST00000529345.6_1_14:61448346-61550389:+|nuORF;ENST00000532148.5_1_14:61447983-61468748:+|nuORF;nc|ENSG00000017483|Q8WUX1-2|SLC38A5;nc|ENSG00000139974|Q8IZM9-2|SLC38A6 88.90359156742426 0.0097709727222801 4 [{I|L}A]MGSG{I|L}{I|L}G{I|L} 10 0 + 82.622 0.0 0.0 8.8791 8.8791 80.254 0.0 0.0 0.0 8.469552425944116 10.48455006504028 8.469552425944116 0.4710624853235146 0 1.4604093769761874 1.0969100130080565 1.6237125054200234 0.0 + + [{I|L}A]MGSG{I|L}{I|L}G{I|L};[{I|L}A]VSGMA{I|L}G{I|L};[{I|L}A]VSGAM{I|L}G{I|L};[{I|L}A]M[NS]{I|L}{I|L}G{I|L};[{I|L}A]GSVMA{I|L}G{I|L};[{I|L}A]GSVAM{I|L}G{I|L};[{I|L}A]GSGM{I|L}{I|L}G{I|L};[{I|L}A]MA[TA]A{I|L}G{I|L};[{I|L}A]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A{I|L}{I|L}G{I|L};[{I|L}A]MGSVA{I|L}G{I|L} 8.8791;8.8285;8.6942;8.6708;8.5844;8.4502;8.4487;8.3488;8.2953;8.1786 +;-;-;-;-;-;-;-;-;- + 8155 1 1.948 115398.4 0.4099999964237213 14006 5463 19470 HBL1_DMSO_200M_050219_2,19471 HBL1_DMSO_200M_050219_2,19471,AIMGSGILGL True True AIMGSGILGL 105.70495 931.528186023235 1844267.5 19470.0 ENSG00000139974|ENST00000267488|SLC38A6;;ENST00000532148.5_1_14:61447983-61468748:+|nuORF;;ENSG00000188338|ENST00000614032|SLC38A3;;ENSG00000111371|ENST00000398637|SLC38A1;;ENSG00000139209|ENST00000266579|SLC38A4;;nc|ENSG00000139974|Q8IZM9-2|SLC38A6;;ENSG00000017483|ENST00000620913|SLC38A5;;ENST00000497336.1_1_X:48316945-48325440:-|nuORF;;nc|ENSG00000017483|Q8WUX1-2|SLC38A5;;ENST00000529345.6_1_14:61448346-61550389:+|nuORF 6.809624036153157 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19484 105.77 800.0 107620.0 25 0 48098.0 2614 ASRAHLAGRRL 11 47 604.3585159948833 1206.7024790565663 2 604.3576537966728 MULTI CID FTMS 0 0 0 19483 67940.09375 0.3752682789583337 -13 0.0646591186523437 1 Unmodified _ASRAHLAGRRL_ ENST00000310512.3_1_7:100027461-100027629:+|nuORF 0.9622753412299312 0.8706078577147922 4 {I|L}{I|L} 2 9 10.969 0.0 0.0 0.90901 0.0 0.0 149.091469390354 828.4148043268186 977.5062737171728 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 0.90901 - 6 + 1 1.948 68947.6 0.3499999940395355 14007 5475 19483 HBL1_DMSO_200M_050219_2,19484 HBL1_DMSO_200M_050219_2,19484,ASRAHLAGRRL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19485 105.78 800.0 135340.0 25 0 31439.0 + -1 VRLRAPGM 8 80 458.26357731785856 914.5126017025171 2 458.2633239626884 MULTI CID FTMS 0 0 0 19483 89082.8671875 0.6134218617895644 -1 0.004058837890625 2 Oxidation (M) _VRLRAPGM(Oxidation (M))_ REV__ENST00000252032.9_1_20:3232842-3233022:-|nuORF 0.7936320650641473 0.8195151834710337 4 Q 1 -1 3.9794 0.0 0.0 0.43514 0.0 0.0 456.3263662062265 327.1124666803344 783.4388328865609 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.43514 - 14 + 1 1.948 88271.5 0.3400000035762787 14008 5475 19483 HBL1_DMSO_200M_050219_2,19485 HBL1_DMSO_200M_050219_2,19485,VRLRAPGM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19491 105.81 800.0 246210.0 25 0 42736.0 + 41321 VPIFPQPLI 9 73 1023.6236206856636 1022.6163442190636 1 1023.623461902142 MULTI CID FTMS 0 0 0 19490 116741.5 0.4759996098455762 -41 0.2489013671875 1 Unmodified _VPIFPQPLI_ ENSG00000164896|ENST00000297532|FASTK;ENST00000460980.5_1_7:150773814-150775027:-|nuORF;ENST00000466855.1_1_7:150774601-150775027:-|nuORF;ENST00000467237.5_1_7:150774601-150776190:-|nuORF;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;nc|ENSG00000164896|Q14296-4|FASTK 97.07464715276576 0.0121042244793311 4 [{I|L}P]V{M(Oxidation (M))|F}PQP{I|L}{I|L} 9 2 + 81.78 0.0 0.0 7.9971 7.9971 82.768 0.0 0.0 0.0 4.259687322722812 12.186427890645248 4.259687322722812 2.4865124202832334 0 2.1237125054200234 1.5228787452803376 0.0 0.3252574989159953 [{I|L}P]V{M(Oxidation (M))|F}PQP{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}VPQP{I|L}{I|L};[VP]{I|L}{M(Oxidation (M))|F}PQP{I|L}{I|L};VP{I|L}{M(Oxidation (M))|F}PQP{I|L}{I|L};[{I|L}P]V{M(Oxidation (M))|F}P[AG]P{I|L}{I|L};{I|L}PV{M(Oxidation (M))|F}PQP{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}VP[AG]P{I|L}{I|L};[VP]{I|L}{M(Oxidation (M))|F}P[AG]P{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}PVQP{I|L}{I|L};[QP]P{I|L}{M(Oxidation (M))|F}VP{I|L}{I|L} 7.9971;7.754;7.5806;6.8054;6.7786;6.6121;6.5355;6.3621;6.2467;6.2124 -;-;+;+;-;-;-;-;-;- + 922 1 1.948 130434.9 0.3899999856948852 14009 5480 19490 HBL1_DMSO_200M_050219_2,19491 HBL1_DMSO_200M_050219_2,19491,VPIFPQPLI True True VPIFPQPLI 105.81219 1023.62346190214 28337922.0 19490.0 nc|ENSG00000164896|Q14296-4|FASTK;;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;;nc|ENSG00000164896|Q14296-3|FASTK;;ENSG00000164896|ENST00000297532|FASTK;;ENST00000466855.1_1_7:150774601-150775027:-|nuORF;;ENST00000460980.5_1_7:150773814-150775027:-|nuORF;;nc|ENSG00000164896|Q14296-2|FASTK;;ENST00000467237.5_1_7:150774601-150776190:-|nuORF 6.938483556111653 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19496 105.84 800.0 187130.0 25 0 25662.0 -1 0 85 852.555675105467 0 852.5558349490166 PEAK CID FTMS 0 0 0 19495 75439.7265625 0.6722256144232971 -7 0.0406112670898437 1 4 {I|L}{I|L}{I|L}PNT 6 -1 36.776 0.0 0.0 2.1594 0.0 0.0 869.5586025529277 179.11951624088127 1048.678118793809 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 1.4802046884880935 {I|L}{I|L}{I|L}PNT 2.1594 - 432 + 1 1.948 106666.3 0.3799999952316284 14010 5484 19495 HBL1_DMSO_200M_050219_2,19496 HBL1_DMSO_200M_050219_2,19496, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19497 105.85 800.0 115420.0 25 0 58141.0 + -1 VCRKRKWLQLL 11 54 750.4523352602683 1498.8901175873366 2 750.4524413943291 MULTI CID FTMS 0 0 0 19495 88233.75 0.928432200334958 -4 0.0284194946289062 2 Carbamidomethyl (C) _VC(Carbamidomethyl (C))RKRKWLQLL_ REV__ENSG00000174307|ENST00000367311|PHLDA3 1.4819007175156935 0.86815623132643 4 {M(Oxidation (M))|F}E 2 -1 15.217 0.0 0.0 1.0152 0.0 0.0 244.42043836926865 975.3377169244748 1219.7581552937436 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}E 1.0152 - 28 + 1 1.948 71159.8 0.3300000131130218 14011 5484 19495 HBL1_DMSO_200M_050219_2,19497 HBL1_DMSO_200M_050219_2,19497,VCRKRKWLQLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19499 105.87 567.0 108140.0 25 0 4658.3 -1 0 97 857.0665607672831 2568.1778529020494 3 857.7349731326103 MULTI CID FTMS 0 0 0 19498 42969.99609375 0.1236183910242884 62 -0.511138916015625 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 47.79 0.0 0.0 1.8608 0.0 0.0 0.0 1527.5634824242936 1527.5634824242936 38.13608784304506 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8608 - 270 1 1.948 48384.8 1.0 14012 5485 19498 HBL1_DMSO_200M_050219_2,19499 HBL1_DMSO_200M_050219_2,19499, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19501 105.88 399.0 255030.0 25 0 31134.0 + 44292 YLLPAIVHI 9 84 519.8208642297665 1037.6271755263328 2 519.8210937380791 MULTI CID FTMS 0 0 0 19500 157231.796875 0.0681170366135176 68 -0.5679168701171875 1 Unmodified _YLLPAIVHI_ ENSG00000100201|ENST00000403230|DDX17;ENSG00000108654|ENST00000225792|DDX5;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;nc|ENSG00000100201|Q92841-3|DDX17 56.04830969593885 0.0282699710924866 4 Y{I|L}{I|L}PA{I|L}VH{I|L} 9 0 + 69.925 0.0 0.0 6.7389 6.7389 84.646 0.0 0.0 0.0 51.74492714069423 6.8850707586954485 6.8850707586954485 6.020599913279625 0 0.6989700043360187 2.0 0.0 0.0 + + Y{I|L}{I|L}PA{I|L}VH{I|L};Y{I|L}{I|L}PAV{I|L}H{I|L};Y{I|L}{I|L}{I|L}[PA]VH{I|L};Y{I|L}{I|L}{I|L}[PG]{I|L}H{I|L} 6.7389;6.1587;5.2779;4.6976 +;-;-;- + 206 + 1 1.948 81003.7 1.0 14013 5486 19500 HBL1_DMSO_200M_050219_2,19501 HBL1_DMSO_200M_050219_2,19501,YLLPAIVHI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19504 105.89 179.0 394410.0 25 0 54257.0 + 41318 VPIFPQPLI 9 83 512.3155244371379 1022.616495941076 2 512.3152953982353 MULTI CID FTMS 0 0 0 19503 351257.53125 0.8045088317644197 -16 0.1447219848632812 1 Unmodified _VPIFPQPLI_ ENSG00000164896|ENST00000297532|FASTK;ENST00000460980.5_1_7:150773814-150775027:-|nuORF;ENST00000466855.1_1_7:150774601-150775027:-|nuORF;ENST00000467237.5_1_7:150774601-150776190:-|nuORF;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;nc|ENSG00000164896|Q14296-4|FASTK 42.96799951952854 0.0591636306142405 4 [{I|L}P]{M(Oxidation (M))|F}VPQ 6 5 46.432 0.0 0.0 4.5405 0.0 0.0 0.0 338.2077222051466 338.2077222051466 26.25447181216778 0.0 0.0 0.0 0 0.5 2.0 0.0 0.3807196863200844 [{I|L}P]{M(Oxidation (M))|F}VPQ 4.5405 - 225 1 1.948 74502.8 1.0 14014 5488 19503 HBL1_DMSO_200M_050219_2,19504 HBL1_DMSO_200M_050219_2,19504,VPIFPQPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19509 105.92 800.0 66117.0 25 0 4506.7 -1 0 78 869.078002450525 2604.2121779517747 3 869.4130737185478 MULTI CID FTMS 0 0 0 19508 38079.91015625 0.5497088168529168 -13 0.108367919921875 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 65.583 0.0 0.0 2.5184 0.0 0.0 0.0 1563.5986274969498 1563.5986274969498 37.1669877129645 0.0 0.0 0.0 0 1.0 1.3979400086720375 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.5184 - 301 1 1.948 44578.1 0.9700000286102296 14015 5492 19508 HBL1_DMSO_200M_050219_2,19509 HBL1_DMSO_200M_050219_2,19509, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19514 105.93 169.0 357630.0 25 0 39226.0 -1 0 93 312.1698694254676 622.3251859177352 2 312.1692687869072 MULTI CID FTMS 0 0 0 19513 468453.53125 0.772408164636541 12 -0.1248626708984375 1 4 S 1 -1 1.5938 0.0 0.0 0.2561 0.0 0.0 310.2080422183196 222.0662630670532 532.2743052853727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.2561 - 14 + 1 1.948 51524.7 1.0 14016 5496 19513 HBL1_DMSO_200M_050219_2,19514 HBL1_DMSO_200M_050219_2,19514, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19519 105.96 800.0 147280.0 25 0 11188.0 + 41941 VQIDGLVVL 9 98 955.5818374004922 954.574560933892 1 955.5817138552666 MULTI CID FTMS 0 0 0 19518 103963.5390625 0.1794007257061069 55 -0.505340576171875 1 Unmodified _VQIDGLVVL_ ENSG00000147677|ENST00000521861|EIF3H;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 96.11092074494114 0.0124975504059861 4 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DG{I|L}VV{I|L} 9 0 + 74.951 0.0 0.0 7.8518 7.8518 78.975 0.0 0.0 0.0 0.5854562117251874 16.478174818886366 0.5854562117251874 0.5854562117251874 0 0.7312958898387064 0.0 1.2095083459089813 1.2231975075880328 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DG{I|L}VV{I|L};{[DA]|[EG]}VVQ{I|L}VV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DAVVV{I|L};{[DA]|[EG]}VV{I|L}QVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VEG{I|L}VV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VEAVVV{I|L};{NN|[MP]|[D{I|L}]|[EV]}GVAG{I|L}VV{I|L};{NN|[MP]|[D{I|L}]|[EV]}GVAAVVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EVG{I|L}VV{I|L};{NN|[MP]|[D{I|L}]|[EV]}GVQ{I|L}VV{I|L} 7.8518;7.7904;7.7344;7.7238;7.7209;7.6035;7.5951;7.4777;7.4663;7.4106 +;-;-;-;-;-;-;-;-;- + 6654 1 1.948 85579.7 0.3700000047683716 14017 5500 19518 HBL1_DMSO_200M_050219_2,19519 HBL1_DMSO_200M_050219_2,19519,VQIDGLVVL True True VQIDGLVVL 105.96291 955.581713855267 4967328.0 19518.0 ENSG00000147677|ENST00000521861|EIF3H;;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 2.2788971265157065 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19522 105.98 800.0 154330.0 25 0 92443.0 43356 WPIISITN 8 53 472.26581732775566 942.5170817223112 2 472.2653686404228 MULTI CID FTMS 0 0 0 19521 74099.9609375 0.5573706322735208 -6 0.0383148193359375 1 Unmodified _WPIISITN_ ENSG00000186871|ENST00000334463|ERCC6L 0.7936320650641473 0.8195151834710337 4 {I|L} 1 7 10.837 0.0 0.0 1.1498 0.0 0.0 811.4220632670364 0.0 811.4220632670364 0.0 3.8477553931086295 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1498 + + 2 + 1 1.948 100390.0 0.9200000166893004 14018 5502 19521 HBL1_DMSO_200M_050219_2,19522 HBL1_DMSO_200M_050219_2,19522,WPIISITN False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19525 106.0 800.0 223750.0 25 0 11389.0 + 23821 LVFEGIMEV 9 103 1036.5359157348132 1035.5286392682133 1 1036.536059558392 MULTI CID FTMS 0 0 0 19524 125825.1640625 0.8578442557916769 1 -0.030242919921875 1 Unmodified _LVFEGIMEV_ ENSG00000023516|ENST00000025301|AKAP11 125.62461146993168 0.0025947660936329 4 [{I|L}V]{M(Oxidation (M))|F}EG{I|L}MEV 9 0 + 77.256 0.0 0.0 7.4605 7.4605 79.543 0.0 0.0 0.0 1.3874375643710124 5.0440737207593 1.3874375643710124 1.3874375643710124 0 1.4489700043360187 1.2218487496163564 1.1496498648046138 0.0 + + [{I|L}V]{M(Oxidation (M))|F}EG{I|L}MEV;[{M(Oxidation (M))|F}E]G{I|L}V{I|L}MEV;[{I|L}V]{M(Oxidation (M))|F}EG{I|L}MD{I|L};[{M(Oxidation (M))|F}E]G{I|L}V{I|L}MD{I|L};[{I|L}V]{M(Oxidation (M))|F}EAVMEV;[{M(Oxidation (M))|F}E]G{I|L}{I|L}VMEV;[{M(Oxidation (M))|F}E]GV{I|L}{I|L}MEV;[{M(Oxidation (M))|F}E]VAV{I|L}MEV;[{M(Oxidation (M))|F}E]G{I|L}VM{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F}V{I|L}MEV 7.4605;7.3265;6.9734;6.8394;6.7584;6.6244;6.5104;6.405;6.3775;6.2887 +;-;-;-;-;-;-;-;-;- + 8692 1 1.948 119269.9 0.4900000095367431 14019 5504 19524 HBL1_DMSO_200M_050219_2,19525 HBL1_DMSO_200M_050219_2,19525,LVFEGIMEV True True LVFEGIMEV 106.00366 1036.53605955839 1536684.0 19524.0 ENSG00000023516|ENST00000025301|AKAP11 6.772171179453532 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19526 106.02 800.0 130300.0 25 0 21525.0 + 13857 HVIDYILDL 9 90 550.8030215545601 1099.5914901759202 2 550.8032104372978 MULTI CID FTMS 0 0 0 19524 88215.1953125 0.59606825098124 -6 0.048858642578125 2 Unmodified _HVIDYILDL_ ENSG00000115738|ENST00000396290|ID2;ENSG00000172201|ENST00000378700|ID4;ENST00000462623.1_1_3:62109880-62110168:-|nuORF 85.35673624503755 0.0162188719545379 4 {NN|[MP]|[D{I|L}]|[EV]}YHV{I|L}{I|L}D{I|L} 9 4 + 81.393 0.0 0.0 7.4021 7.4021 77.806 0.0 0.0 0.0 2.0205343810444987 16.478174818886373 2.0205343810444987 0.5237875363565792 0 0.8252574989159953 1.5228787452803376 0.3252574989159953 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}YHV{I|L}{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}YH{I|L}V{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}VHY{I|L}{I|L}D{I|L};[HV]{I|L}DY{I|L}{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}Y{I|L}HV{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}YVH{I|L}{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}YHV{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}YH{I|L}VVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}YHV{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}VHY{I|L}VE{I|L} 7.4021;7.3544;7.264;7.2183;6.7188;6.6944;6.5134;6.4658;6.445;6.3753 -;-;-;+;-;-;-;-;-;- + 789 1 1.948 83282.8 0.3400000035762787 14020 5504 19524 HBL1_DMSO_200M_050219_2,19526 HBL1_DMSO_200M_050219_2,19526,HVIDYILDL True True HVIDYILDL 106.01749 550.803210437298 893980.3125 19524.0 ENSG00000115738|ENST00000396290|ID2;;ENSG00000172201|ENST00000378700|ID4;;ENST00000462623.1_1_3:62109880-62110168:-|nuORF 6.3068037033081055 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19529 106.03 303.0 256660.0 25 0 61438.0 + 33492 SIIGRLLEV 9 76 500.3139015696353 998.6132502060708 2 500.3130370974541 MULTI CID FTMS 0 0 0 19528 185142.09375 0.0366893795316241 -25 0.209381103515625 1 Unmodified _SIIGRLLEV_ ENSG00000172531|ENST00000376745|PPP1CA 40.23920728925047 0.0741434193262949 4 {[QN]|[E{I|L}]|[KN]}[RK]{I|L}{I|L}EV 8 3 + 36.929 0.0 0.0 3.698 3.698 73.198 0.0 0.0 0.0 5.272435506827868 23.389951324071383 5.272435506827868 6.262874945799759 0 0.75 0.958607314841775 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[RK]{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[RK]{I|L}E{I|L}V 3.698;3.0709 -;- 108 1 1.948 65180.2 1.0 14021 5506 19528 HBL1_DMSO_200M_050219_2,19529 HBL1_DMSO_200M_050219_2,19529,SIIGRLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19530 106.04 427.0 256980.0 25 0 20347.0 + 12668 GVLKVFLENV 10 133 559.3345596802882 1116.6545664273765 2 559.3345825076103 MULTI CID FTMS 0 0 0 19528 117092.7421875 0.1607663058210775 -9 0.0870590209960937 2 Unmodified _GVLKVFLENV_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 79.59630418116434 0.0173986606250113 4 [VG]{I|L}KV{M(Oxidation (M))|F}{I|L}ED 9 2 65.937 0.0 0.0 5.9049 0.0 0.0 0.0 113.0734003128263 113.0734003128263 31.934399426116485 0.0 0.0 0.0 0 1.4143943297944483 1.6989700043360187 0.2742275032520141 0.0 [VG]{I|L}KV{M(Oxidation (M))|F}{I|L}ED 5.9049 - 6391 1 1.948 87874.5 1.0 14022 5506 19528 HBL1_DMSO_200M_050219_2,19530 HBL1_DMSO_200M_050219_2,19530,GVLKVFLENV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19531 106.05 701.0 187180.0 25 0 63870.0 + 20950 NIPPYFVAL 9 79 1032.5629651472716 1031.5556886806717 1 1033.570361316204 MULTI CID FTMS 0 0 0 19528 78780.953125 0.3839028078081039 78 -0.6121902465820312 3 Unmodified _LNGTHIHIQ_ ENSG00000196419|ENST00000360079|XRCC6;nc|ENSG00000196419|P12956-2|XRCC6 10.823927491677226 0.5436922275383211 4 {[QV]|[N{I|L}]|[RA]|[KV]}[YN]VAGVA 9 7 54.746 0.0 0.0 5.3071 0.0 0.0 0.0 127.0639158183043 127.0639158183043 37.74588601412914 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.8882104921644451 {[QV]|[N{I|L}]|[RA]|[KV]}[YN]VAGVA 5.3071 - 775 1 1.948 89015.8 1.0 14023 5506 19528 HBL1_DMSO_200M_050219_2,19531 HBL1_DMSO_200M_050219_2,19531,LNGTHIHIQ False False NIPPYFVAL 106.04946 1033.5703613162 23999066.0 19528.0 ENSG00000196419|ENST00000360079|XRCC6;;nc|ENSG00000196419|P12956-2|XRCC6 4.953220049540202 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19534 106.06 381.0 270050.0 25 0 69355.0 + 18430 KWRSANIYII 10 31 632.3615900433485 1262.708627153497 2 632.3614990115166 MULTI CID FTMS 0 0 0 19533 135660.84375 0.7482322512858353 -9 0.1110610961914062 1 Unmodified _KWRSANIYII_ REV__ENST00000504986.5_1_4:41956263-41956386:+|nuORF 1.4819007175156935 0.719781833666733 4 Q 1 -1 9.732 0.0 0.0 0.77072 0.0 0.0 612.3819598178414 519.2421358697874 1131.6240956876288 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Q 0.77072 - 6 + 1 1.948 78783.1 1.0 14024 5508 19533 HBL1_DMSO_200M_050219_2,19534 HBL1_DMSO_200M_050219_2,19534,KWRSANIYII False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19535 106.07 386.0 290630.0 25 0 20046.0 + 12634 GVLALNPLL 9 91 909.5766503803468 908.5693739137467 1 909.5800659060478 MULTI CID FTMS 0 0 0 19533 125698.0234375 0.339703643941337 -13 0.1289291381835937 2 Unmodified _GVLALNPLL_ ENSG00000148803|ENST00000278025|FUOM 70.71552829651908 0.0208223590022201 4 SA{I|L}NP{I|L}{I|L} 7 3 62.216 0.0 0.0 6.8477 0.0 0.0 182.1423054425797 0.0 182.1423054425797 0.0 44.50323172049696 0.0 0.0 0 1.3494850021680094 0.0 0.3054621874040891 1.424742501084005 SA{I|L}NP{I|L}{I|L} 6.8477 - 919 1 1.948 81696.7 1.0 14025 5508 19533 HBL1_DMSO_200M_050219_2,19535 HBL1_DMSO_200M_050219_2,19535,GVLALNPLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19536 106.08 800.0 192270.0 25 0 73921.0 -1 0 96 326.1716092716008 650.3286656100016 2 326.1711608767509 MULTI CID FTMS 0 0 0 19533 91272.3671875 0.5370145886000803 -9 0.1110610961914062 3 4 G 1 -1 12.764 0.0 0.0 1.9627 0.0 0.0 575.2958724965235 0.0 575.2958724965235 0.0 2.5219348107687622 0.0 0.0 0 0.0 0.0 0.0 0.0 G 1.9627 - 13 + 1 1.948 127752.6 0.3600000143051147 14026 5508 19533 HBL1_DMSO_200M_050219_2,19536 HBL1_DMSO_200M_050219_2,19536, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19537 106.1 800.0 60825.0 25 0 17320.0 -1 0 47 1073.553759753704 0 1073.553759753704 PEAK CID FTMS 0 0 0 -1 0 4 4 M 1 -1 4.6041 0.0 0.0 0.21463 0.0 0.0 1568.7314686267457 442.29712325617066 2011.0285918829163 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.21463 - 5 + 1 1.948 37642.7 0.3400000035762787 14027 5508 19533 HBL1_DMSO_200M_050219_2,19537 HBL1_DMSO_200M_050219_2,19537, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19540 106.12 624.0 255760.0 25 0 54385.0 -1 0 54 938.5504164550496 1875.0862799768995 2 939.0509521365166 MULTI CID FTMS 0 0 0 19539 89506.9921875 0.9252971384336192 -11 0.159149169921875 1 4 G 1 -1 10.485 0.0 0.0 0.55915 0.0 0.0 1205.6787615216242 609.3583842238811 1815.0371457455053 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 G 0.55915 - 22 + 1 1.948 111035.9 1.0 14028 5510 19539 HBL1_DMSO_200M_050219_2,19540 HBL1_DMSO_200M_050219_2,19540, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19543 106.14 800.0 296020.0 25 0 79221.0 31791 RSREKRRRRRR 11 68 806.504010273516 1610.993467613832 2 806.5049316287041 MULTI CID FTMS 0 0 0 19542 88073.5703125 0.3882405251360685 -14 0.1807098388671875 1 Unmodified _RSREKRRRRRR_ ENSG00000126461|ENST00000360565|SCAF1 0.0 0.8751479354844584 4 V 1 11 10.485 0.0 0.0 0.65081 0.0 0.0 612.3804547710552 896.5219210260374 1508.9023757970926 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V 0.65081 - 22 + 1 1.948 162106.5 0.4000000059604645 14029 5512 19542 HBL1_DMSO_200M_050219_2,19543 HBL1_DMSO_200M_050219_2,19543,RSREKRRRRRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19546 106.15 172.0 426820.0 25 0 59807.0 + 41319 VPIFPQPLI 9 70 512.3155244371379 1022.616495941076 2 512.3154174685478 MULTI CID FTMS 0 0 0 19545 308053.71875 0.7055562239770413 10 -0.0594940185546875 1 Unmodified _VPIFPQPLI_ ENSG00000164896|ENST00000297532|FASTK;ENST00000460980.5_1_7:150773814-150775027:-|nuORF;ENST00000466855.1_1_7:150774601-150775027:-|nuORF;ENST00000467237.5_1_7:150774601-150776190:-|nuORF;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;nc|ENSG00000164896|Q14296-4|FASTK 49.66892048692302 0.0410958345688192 4 [{I|L}P]{M(Oxidation (M))|F}VPQP{I|L}{I|L} 9 2 + 64.887 0.0 0.0 6.3452 6.3452 78.992 0.0 0.0 0.0 18.12913356642856 19.704999916446795 18.12913356642856 3.0102999566398125 0 1.1237125054200234 2.0 0.0 0.3807196863200844 [{I|L}P]{M(Oxidation (M))|F}VPQP{I|L}{I|L};[{I|L}P]V{M(Oxidation (M))|F}PQP{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}[QP]VP{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}VP[AG]P{I|L}{I|L};[{I|L}P][QP]{M(Oxidation (M))|F}VP{I|L}{I|L};[{I|L}P]V{M(Oxidation (M))|F}P[AG]P{I|L}{I|L};[VP]{I|L}{M(Oxidation (M))|F}PQP{I|L}{I|L};[{I|L}P]V{[WS]|[C(Carbamidomethyl (C)){I|L}]}VP{I|L}{I|L};[QP][{I|L}P]{M(Oxidation (M))|F}VP{I|L}{I|L};[QP]{M(Oxidation (M))|F}[{I|L}P]VP{I|L}{I|L} 6.3452;6.0509;5.1004;5.0725;4.9282;4.7781;4.5724;4.4337;3.7781;3.6559 -;-;-;-;-;-;+;-;-;- + 200 1 1.948 73072.4 1.0 14030 5514 19545 HBL1_DMSO_200M_050219_2,19546 HBL1_DMSO_200M_050219_2,19546,VPIFPQPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19547 106.16 696.0 135830.0 25 0 13181.0 + 9666 FLPSYIIDV 9 98 533.7952140814123 1065.5758752296244 2 533.7949096560478 MULTI CID FTMS 0 0 0 19545 92144.96875 0.4158987852900495 -25 0.2514724731445312 2 Unmodified _FLPSYIIDV_ ENSG00000071894|ENST00000616140|CPSF1;ENST00000532560.5_1_8:145625727-145626379:-|nuORF 57.47134341890925 0.0274820932774257 4 [PS]Y{I|L}{I|L}{M(Oxidation (M))|F}{I|L}DV 9 4 + 60.715 0.0 0.0 5.6978 5.6978 74.502 0.0 0.0 0.0 3.517706892467224 7.438072214235753 3.517706892467224 1.9453781259591096 0 1.1435078169319297 0.0 1.642642683904553 0.0 [PS]Y{I|L}{I|L}{M(Oxidation (M))|F}{I|L}DV;[PS]Y{I|L}{M(Oxidation (M))|F}{I|L}{I|L}DV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}{I|L}DV;[Y{I|L}]SP{I|L}{M(Oxidation (M))|F}{I|L}DV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}{I|L}DV;[Y{I|L}]SP{M(Oxidation (M))|F}{I|L}{I|L}DV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AE{I|L}{M(Oxidation (M))|F}{I|L}DV;[PS]Y{M(Oxidation (M))|F}{I|L}{I|L}{I|L}DV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AE{M(Oxidation (M))|F}{I|L}{I|L}DV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{I|L}{I|L}DV 5.6978;5.5153;5.3677;5.3289;5.1852;5.1463;4.7255;4.593;4.5429;4.2629 -;-;-;-;-;-;-;-;-;- 689 1 1.948 80251.6 1.0 14031 5514 19545 HBL1_DMSO_200M_050219_2,19547 HBL1_DMSO_200M_050219_2,19547,FLPSYIIDV True True FLPSYIIDV 106.15755 533.794909656048 1887368.375 19545.0 ENST00000532560.5_1_8:145625727-145626379:-|nuORF;;ENSG00000071894|ENST00000616140|CPSF1 3.162402629852295 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19551 106.18 380.0 284070.0 25 0 194720.0 27796 PLPPPVGLLP 10 36 999.6196009988556 998.6123245322556 1 1001.627185046673 MULTI CID FTMS 0 0 0 19550 80182.8671875 0.4656645558708158 -19 0.2272109985351562 1 Unmodified _PLPPPVGLLP_ ENST00000243050.5_1_12:52445232-52448188:+|nuORF 4.3292370932331545 0.7066112369704343 4 Q 1 10 2.4743 0.0 0.0 0.24777 0.0 0.0 348.2817103738557 519.2382296197874 867.519939993643 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.24777 - 2 + 1 1.948 76916.8 1.0 14032 5517 19550 HBL1_DMSO_200M_050219_2,19551 HBL1_DMSO_200M_050219_2,19551,PLPPPVGLLP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19564 106.23 354.0 210730.0 25 0 18984.0 -1 0 67 1045.555377543183 0 1045.555957019329 PEAK CID FTMS 0 0 0 19563 91492.984375 0.5604012114246011 -23 0.197540283203125 1 4 {I|L}{M(Oxidation (M))|F}{I|L}{[QG]|[NA]}{I|L}E 7 -1 33.24 0.0 0.0 1.5911 0.0 0.0 1062.5440303775792 223.07293115787343 1285.616961535453 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2803695511246982 0.5866968715561641 {I|L}{M(Oxidation (M))|F}{I|L}{[QG]|[NA]}{I|L}E 1.5911 - 279 + 1 1.948 57608.2 1.0 14033 5529 19563 HBL1_DMSO_200M_050219_2,19564 HBL1_DMSO_200M_050219_2,19564, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19565 106.24 408.0 265420.0 25 0 18455.0 + 24015 LVYEAIIMV 9 82 1050.590116351301 1049.5828398847011 1 1052.593920886517 MULTI CID FTMS 0 0 0 19563 148978.578125 0.7676357180024141 15 -0.13446044921875 2 Unmodified _LVYEAIIMV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 21.74664581756881 0.2544899275067181 4 [YE]AV{I|L}{M(Oxidation (M))|F}V{I|L}P 9 5 + 37.959 0.0 0.0 3.6166 3.6166 67.274 0.0 0.0 0.0 4.771212547196626 13.010299956639813 4.771212547196626 2.430380486862944 0 0.0 0.0 0.2887254899964357 0.0 [YE]AV{I|L}{M(Oxidation (M))|F}V{I|L}P;[YE]A{I|L}V{M(Oxidation (M))|F}V{I|L}P;[{I|L}V]YEA{M(Oxidation (M))|F}V{I|L}P;[YE]AV{I|L}{I|L}[{M(Oxidation (M))|F}V]P;[YE]V{I|L}A{M(Oxidation (M))|F}V{I|L}P;[YE]VA{I|L}{M(Oxidation (M))|F}V{I|L}P;[YE]A{I|L}V{I|L}[{M(Oxidation (M))|F}V]P;[{I|L}V]YEA{I|L}[{M(Oxidation (M))|F}V]P;[YE]AV{I|L}{I|L}{I|L}{[ET]|[MV]};[{I|L}V]{[CP]|[EA]}Y{M(Oxidation (M))|F}V{I|L}P 3.6166;3.385;3.162;2.9506;2.7562;2.7562;2.7191;2.4961;2.377;2.2847 -;-;-;-;-;-;-;-;-;- 1004 1 1.948 72226.9 1.0 14034 5529 19563 HBL1_DMSO_200M_050219_2,19565 HBL1_DMSO_200M_050219_2,19565,LVYEAIIMV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19568 106.26 800.0 162730.0 25 0 13396.0 + 15508 IPVEFKLVI 9 115 529.3366561812804 1056.6587594293608 2 529.3370239138603 MULTI CID FTMS 0 0 0 19567 72791.390625 0.1069839291096199 -32 0.2970123291015625 1 Unmodified _IPVEFKLVI_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19756233-19756668:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1;nc|ENSG00000105726|Q9HD20-3|ATP13A1 82.5293158979368 0.0169039238599547 4 {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L} 9 0 + 63.833 0.0 0.0 6.041 6.041 90.205 0.0 0.0 0.0 24.57547748647869 10.142361672402345 10.142361672402345 28.62063790808533 0 2.135151878060192 1.3979400086720375 0.3252574989159953 0.0 + + {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L};{I|L}[{I|L}T]{I|L}V{[WT]|[RM]}V{I|L};{I|L}[{I|L}T]{I|L}SW{I|L}V{I|L} 6.041;3.3324;2.6081 +;-;- + 1338 + 1 1.948 106707.4 0.9200000166893004 14035 5531 19567 HBL1_DMSO_200M_050219_2,19568 HBL1_DMSO_200M_050219_2,19568,IPVEFKLVI True True IPVEFKLVI 106.25585 529.33702391386 16400644.5 19567.0 nc|ENSG00000105726|Q9HD20-2|ATP13A1;;ENST00000469641.5_1_19:19756233-19756668:-|nuORF;;ENSG00000105726|ENST00000357324|ATP13A1;;nc|ENSG00000105726|Q9HD20-3|ATP13A1 4.212482372919719 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19574 106.29 692.0 175470.0 25 0 12155.0 + 16017 ITFDEIVNI 9 81 1063.567759761737 1062.5604832951371 1 1063.573046863079 MULTI CID FTMS 0 0 0 19573 83290.1875 0.7271327974407672 -9 0.0609207153320312 1 Unmodified _ITFDEIVNI_ ENSG00000197958|ENST00000361436|RPL12;nc|ENSG00000197958|P30050-2|RPL12 68.08070601005525 0.0218408846571049 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}T{I|L}{I|L}VN{I|L} 9 3 + 81.481 0.0 0.0 7.6684 7.6684 86.169 0.0 0.0 0.0 5.642492736872597 43.55651869704872 5.642492736872597 4.815534464597704 0 1.066901560044258 0.0 1.841129063296272 0.3807196863200844 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}T{I|L}{I|L}VN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F}T{I|L}VN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}T{I|L}V{I|L}N{I|L};{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}T{I|L}VN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L}T{I|L}VN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F}TV{I|L}N{I|L};{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}TV{I|L}N{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}T{I|L}{I|L}VGG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}{I|L}TV{I|L}N{I|L};{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}T{I|L}VGG{I|L} 7.6684;7.2152;7.0682;7.0495;6.9319;6.615;6.4493;6.4435;6.3317;6.1829 -;-;-;-;-;-;-;-;-;- 2714 1 1.948 83511.3 1.0 14036 5536 19573 HBL1_DMSO_200M_050219_2,19574 HBL1_DMSO_200M_050219_2,19574,ITFDEIVNI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19576 106.29 11.0 6606100.0 25 0 1535700.0 + 33493 SIIGRLLEV 9 70 500.3139015696353 998.6132502060708 2 500.3137084841728 MULTI CID FTMS 0 0 0 19575 4954825.0 0.9818915366877756 6 -0.06298828125 1 Unmodified _SIIGRLLEV_ ENSG00000172531|ENST00000376745|PPP1CA 49.52724829834842 0.0414064571532091 4 {[TV]|[{I|L}S]}{I|L}GR{I|L}{I|L}EV 9 0 + 60.509 0.0 0.0 6.0593 6.0593 90.619 0.0 0.0 0.0 20.737862141609185 45.81630024853916 20.737862141609185 34.29006936454357 0 1.9386218330464624 2.0 0.3252574989159953 0.0 + + {[TV]|[{I|L}S]}{I|L}GR{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}KR{I|L}{I|L}EV 6.0593;2.6255 +;- + 148 1 1.948 62781.0 1.0 14037 5537 19575 HBL1_DMSO_200M_050219_2,19576 HBL1_DMSO_200M_050219_2,19576,SIIGRLLEV True True SIIGRLLEV 106.29131 500.313708484173 287258328.0 19575.0 ENSG00000172531|ENST00000376745|PPP1CA 4.928980350494385 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19577 106.29 84.0 665810.0 25 0 60707.0 + 12669 GVLKVFLENV 10 86 559.3345596802882 1116.6545664273765 2 559.3347656130791 MULTI CID FTMS 0 0 0 19575 457782.6875 0.6285276966216302 22 -0.193756103515625 2 Unmodified _GVLKVFLENV_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 36.12702656103203 0.1984647928738587 4 {I|L}VR{M(Oxidation (M))|F}{I|L}ENV 8 4 39.532 0.0 0.0 3.5402 0.0 0.0 128.09533888984532 0.0 128.09533888984532 0.0 18.589611303566866 0.0 0.0 0 0.5924778212679485 0.0 0.3252574989159953 0.0 {I|L}VR{M(Oxidation (M))|F}{I|L}ENV 3.5402 - 864 1 1.948 48576.1 1.0 14038 5537 19575 HBL1_DMSO_200M_050219_2,19577 HBL1_DMSO_200M_050219_2,19577,GVLKVFLENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19578 106.31 800.0 63682.0 25 0 8180.1 -1 0 41 1056.760546863079 0 1056.760546863079 PEAK CID FTMS 0 0 0 -1 0 3 4 {I|L}V{I|L}T 4 -1 18.175 0.0 0.0 0.86078 0.0 0.0 1072.8550037829957 609.357674924763 1682.2126787077586 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}V{I|L}T 0.86078 - 94 + 1 1.948 43466.8 0.3899999856948852 14039 5537 19575 HBL1_DMSO_200M_050219_2,19578 HBL1_DMSO_200M_050219_2,19578, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19582 106.33 649.0 143760.0 25 0 55820.0 -1 0 67 326.17166812243846 650.328783311677 2 326.1711303591728 MULTI CID FTMS 0 0 0 19581 132483.578125 0.789130997650369 1 -0.0138702392578125 1 4 G 1 -1 12.764 0.0 0.0 1.9627 0.0 0.0 575.2959215336481 0.0 575.2959215336481 0.0 11.17041603016684 0.0 0.0 0 0.0 0.0 0.0 0.0 G 1.9627 - 8 + 1 1.948 82886.3 1.0 14040 5540 19581 HBL1_DMSO_200M_050219_2,19582 HBL1_DMSO_200M_050219_2,19582, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19585 106.35 800.0 64008.0 25 0 4948.2 + 17340 KLWEMDNMLI 10 68 646.8225999378257 1291.6306469424512 2 646.8225585818291 MULTI CID FTMS 0 0 0 19584 45699.58984375 0.5394718761239867 1 -0.016387939453125 1 Unmodified _KLWEMDNMLI_ ENSG00000178988|ENST00000320848|MRFAP1L1;ENSG00000179010|ENST00000382581|MRFAP1 51.41523569358685 0.0718446036348414 4 [K{I|L}]WEMDNM{I|L}{I|L} 10 0 + 80.495 0.0 0.0 6.232 6.232 85.865 0.0 0.0 0.0 3.802112417116064 65.01016889216956 3.802112417116064 9.164539485499262 0 0.5 0.0 0.7614393726401688 0.8494850021680094 + + [K{I|L}]WEMDNM{I|L}{I|L};[K{I|L}]WEMDGGM{I|L}{I|L};[WE][K{I|L}]MDNM{I|L}{I|L};[WE][K{I|L}]MDGGM{I|L}{I|L};[DN]M[WE][K{I|L}]M{I|L}{I|L};[DN]M[WE]M[K{I|L}]{I|L}{I|L} 6.232;5.5225;5.1497;4.4402;3.2669;2.705 +;-;-;-;-;- + 152 1 1.948 51783.1 0.9300000071525574 14041 5542 19584 HBL1_DMSO_200M_050219_2,19585 HBL1_DMSO_200M_050219_2,19585,KLWEMDNMLI True True KLWEMDNMLI 106.3495 646.822558581829 681574.25 19584.0 ENSG00000179010|ENST00000382581|MRFAP1;;ENSG00000178988|ENST00000320848|MRFAP1L1 6.7255527178446455 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19591 106.37 308.0 163920.0 25 0 28462.0 + 41322 VPIFPQPLI 9 44 1023.6236206856636 1022.6163442190636 1 1023.626208484173 MULTI CID FTMS 0 0 0 19590 81162.0546875 0.3309286446166558 26 -0.2113113403320312 1 Unmodified _VPIFPQPLI_ ENSG00000164896|ENST00000297532|FASTK;ENST00000460980.5_1_7:150773814-150775027:-|nuORF;ENST00000466855.1_1_7:150774601-150775027:-|nuORF;ENST00000467237.5_1_7:150774601-150776190:-|nuORF;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;nc|ENSG00000164896|Q14296-4|FASTK 34.10243960390752 0.1078313939113124 4 [{I|L}P]V{M(Oxidation (M))|F}[QP][{I|L}P]{I|L} 9 2 + 32.61 0.0 0.0 3.1889 3.1889 66.239 0.0 0.0 0.0 4.373308077154057 17.94408732588999 4.373308077154057 2.486512420283237 0 1.424742501084005 0.0 0.0 0.0 [{I|L}P]V{M(Oxidation (M))|F}[QP][{I|L}P]{I|L};[{I|L}P]{M(Oxidation (M))|F}V[QP][{I|L}P]{I|L};[{I|L}P]V{[WS]|[C(Carbamidomethyl (C)){I|L}]}V[{I|L}P]{I|L};[QP][{I|L}P]{M(Oxidation (M))|F}V[{I|L}P]{I|L};[QP]{M(Oxidation (M))|F}[{I|L}P]V[{I|L}P]{I|L};[{I|L}P]{M(Oxidation (M))|F}[QP]V[{I|L}P]{I|L};[{I|L}P][QP]{M(Oxidation (M))|F}V[{I|L}P]{I|L} 3.1889;2.9457;2.2334;2.1124;2.1124;1.9902;1.818 -;-;-;-;-;-;- 99 1 1.948 42957.9 1.0 14042 5547 19590 HBL1_DMSO_200M_050219_2,19591 HBL1_DMSO_200M_050219_2,19591,VPIFPQPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19593 106.39 800.0 190050.0 25 0 39591.0 31792 RSREKRRRRRR 11 52 806.504010273516 1610.993467613832 2 807.0060912966728 MULTI CID FTMS 0 0 0 19592 92285.359375 0.3788841838036341 19 -0.1537094116210937 1 Unmodified _RSREKRRRRRR_ ENSG00000126461|ENST00000360565|SCAF1 0.0 0.8751479354844584 4 V 1 11 10.485 0.0 0.0 0.65081 0.0 0.0 612.3809147223565 896.5207613580686 1508.9016760804252 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V 0.65081 - 14 + 1 1.948 106570.6 0.3400000035762787 14043 5548 19592 HBL1_DMSO_200M_050219_2,19593 HBL1_DMSO_200M_050219_2,19593,RSREKRRRRRR False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19596 106.4 333.0 207460.0 25 0 18066.0 + 9667 FLPSYIIDV 9 90 533.7952140814123 1065.5758752296244 2 533.7949706912041 MULTI CID FTMS 0 0 0 19595 171645.125 0.7747248705693299 11 -0.093994140625 1 Unmodified _FLPSYIIDV_ ENSG00000071894|ENST00000616140|CPSF1;ENST00000532560.5_1_8:145625727-145626379:-|nuORF 44.40701690623563 0.0526327925666318 4 [PS]Y{I|L}{M(Oxidation (M))|F}{I|L} 6 5 38.135 0.0 0.0 3.5788 0.0 0.0 0.0 342.16978878825824 342.16978878825824 14.986512420283232 0.0 0.0 0.0 0 0.3054621874040891 0.0 1.8169015600442573 0.0 [PS]Y{I|L}{M(Oxidation (M))|F}{I|L} 3.5788 - 402 1 1.948 61623.9 1.0 14044 5550 19595 HBL1_DMSO_200M_050219_2,19596 HBL1_DMSO_200M_050219_2,19596,FLPSYIIDV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19597 106.41 404.0 350340.0 25 0 25622.0 + 2796 ATVAAAWLL 9 90 915.5292344268806 914.5219579602806 1 915.528857409954 MULTI CID FTMS 0 0 0 19595 227396.953125 1.0 0 0.0 2 Unmodified _ATVAAAWLL_ ENSG00000116157|ENST00000361314|GPX7;ENST00000459779.1_1_1:53068081-53072661:+|nuORF 77.98433622928108 0.0180125044636492 4 [Q{I|L}]TAAW{I|L}{I|L} 8 4 + 57.758 0.0 0.0 6.3157 6.3157 79.301 0.0 0.0 0.0 2.764209843288903 22.88364391835536 2.764209843288903 3.1220597726247235 0 0.6307196863200843 0.0 2.3807196863200843 0.0 [Q{I|L}]TAAW{I|L}{I|L};[W{I|L}]AAASA{I|L}{I|L};[W{I|L}]AQTA{I|L}{I|L};[W{I|L}]AAGTA{I|L}{I|L};[Q{I|L}]TAWA{I|L}{I|L};{[NV]|[RG]}VTAW{I|L}{I|L};[Q{I|L}]ATAW{I|L}{I|L};{[NV]|[RG]}TVAW{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RA{I|L}DA{I|L};[W{I|L}]AAAS{I|L}A{I|L} 6.3157;5.9743;5.7876;5.7317;5.7131;5.5374;5.4642;5.4629;5.2863;5.235 -;-;-;-;-;-;-;-;-;- 2668 1 1.948 96426.3 1.0 14045 5550 19595 HBL1_DMSO_200M_050219_2,19597 HBL1_DMSO_200M_050219_2,19597,ATVAAAWLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19598 106.42 800.0 149520.0 25 0 19775.0 + 41320 VPIFPQPLI 9 93 512.3155244371379 1022.616495941076 2 512.3152953982353 MULTI CID FTMS 0 0 0 19595 104932.5625 0.2403341302619314 46 -0.3009872436523437 3 Unmodified _VPIFPQPLI_ ENSG00000164896|ENST00000297532|FASTK;ENST00000460980.5_1_7:150773814-150775027:-|nuORF;ENST00000466855.1_1_7:150774601-150775027:-|nuORF;ENST00000467237.5_1_7:150774601-150776190:-|nuORF;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;nc|ENSG00000164896|Q14296-4|FASTK 59.79521254764295 0.0261954583213598 4 [{I|L}P]{M(Oxidation (M))|F}VPQP{I|L}{I|L} 9 2 + 60.116 0.0 0.0 5.8787 5.8787 77.188 0.0 0.0 0.0 17.160033436347994 16.694699959806982 16.694699959806982 3.0102999566398125 0 0.7429928190999391 2.0 0.0 0.7614393726401688 [{I|L}P]{M(Oxidation (M))|F}VPQP{I|L}{I|L};[{I|L}P]V{M(Oxidation (M))|F}PQP{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}[QP]VP{I|L}{I|L};[{I|L}P][QP]{M(Oxidation (M))|F}VP{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}VP[AG]P{I|L}{I|L};[VP]{I|L}{M(Oxidation (M))|F}PQP{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}N[{I|L}P]P{I|L}{I|L};[{I|L}P]V{M(Oxidation (M))|F}P[AG]P{I|L}{I|L};[{I|L}P]N{M(Oxidation (M))|F}[{I|L}P]P{I|L}{I|L};[{I|L}P]V{[WS]|[C(Carbamidomethyl (C)){I|L}]}VP{I|L}{I|L} 5.8787;5.5843;4.806;4.6338;4.2336;4.2006;4.082;3.9392;3.9098;3.767 -;-;-;-;-;+;-;-;-;- + 511 1 1.948 110799.8 0.7200000286102295 14046 5550 19595 HBL1_DMSO_200M_050219_2,19598 HBL1_DMSO_200M_050219_2,19598,VPIFPQPLI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19603 106.45 755.0 217080.0 25 0 13968.0 + 12635 GVLALNPLL 9 100 909.5766503803468 908.5693739137467 1 909.5779296755792 MULTI CID FTMS 0 0 0 19602 146621.25 0.3962494519971458 33 -0.2103042602539062 1 Unmodified _GVLALNPLL_ ENSG00000148803|ENST00000278025|FUOM 81.86404211737425 0.017065112157077 4 [VG]{I|L}A{I|L}NP{I|L}{I|L} 9 0 + 77.176 0.0 0.0 8.4943 8.4943 82.803 0.0 0.0 0.0 13.851297213088884 53.23123568026861 13.851297213088884 2.001962355242938 0 1.7302046884880935 1.3979400086720375 0.0 1.424742501084005 + + [VG]{I|L}A{I|L}NP{I|L}{I|L};[VG]{I|L}AN{I|L}P{I|L}{I|L};[VG]{I|L}NA{I|L}P{I|L}{I|L};[VG]A{I|L}{I|L}NP{I|L}{I|L};[VG]A{I|L}N{I|L}P{I|L}{I|L};[VG]N{I|L}A{I|L}P{I|L}{I|L};[{I|L}P]Q[KT]P{I|L}{I|L};[{I|L}P]QA{I|L}AA{I|L}{I|L};[VG]VVVNP{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}NP{I|L}{I|L} 8.4943;8.2739;7.8626;7.5003;7.28;7.0933;6.6257;6.5919;5.9925;5.9758 +;-;-;-;-;-;-;-;-;- + 1763 1 1.948 111229.8 1.0 14047 5554 19602 HBL1_DMSO_200M_050219_2,19603 HBL1_DMSO_200M_050219_2,19603,GVLALNPLL True True GVLALNPLL 106.45187 909.577929675579 5813475.5 19602.0 ENSG00000148803|ENST00000278025|FUOM 4.570529540379842 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19607 106.48 800.0 167480.0 25 0 22518.0 + 42905 VVPQLFITV 9 80 1015.6185973224184 1014.6113208558183 1 1015.617907702923 MULTI CID FTMS 0 0 0 19606 101468.921875 0.2588535827124684 -52 0.4423141479492187 1 Unmodified _VVPQLFITV_ ENSG00000142583|ENST00000377424|SLC2A5;nc|ENSG00000142583|P22732-2|SLC2A5 41.8396318013385 0.0653578398400075 4 [QP]{I|L}VV{M(Oxidation (M))|F}{I|L}TV 9 4 + 64.368 0.0 0.0 6.3441 6.3441 74.268 0.0 0.0 0.0 4.771212547196633 16.47817481888638 4.771212547196633 0.522548021736462 0 0.0 0.0 0.4247425010840047 0.8516784832448856 [QP]{I|L}VV{M(Oxidation (M))|F}{I|L}TV;[QP]{I|L}{M(Oxidation (M))|F}{I|L}TVVV;[QP]{I|L}{M(Oxidation (M))|F}{I|L}VTVV;[QP]{I|L}{M(Oxidation (M))|F}{I|L}VVTV;[QP]{I|L}{M(Oxidation (M))|F}VV{I|L}TV;[{I|L}P]QVV{M(Oxidation (M))|F}{I|L}TV;[{I|L}P]Q{M(Oxidation (M))|F}{I|L}TVVV;[{I|L}P]Q{M(Oxidation (M))|F}{I|L}VTVV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}PQTVVV;[QP]{I|L}V{M(Oxidation (M))|F}V{I|L}TV 6.3441;6.2926;6.1456;6.0469;5.9003;5.8739;5.8224;5.6754;5.6545;5.6036 -;-;-;-;-;-;-;-;-;- 1819 1 1.948 91830.7 0.3600000143051147 14048 5557 19606 HBL1_DMSO_200M_050219_2,19607 HBL1_DMSO_200M_050219_2,19607,VVPQLFITV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19613 106.5 98.0 710390.0 25 0 55389.0 + 15509 IPVEFKLVI 9 90 529.3366561812804 1056.6587594293608 2 529.3366577029228 MULTI CID FTMS 0 0 0 19612 591359.25 0.8691403686219661 -1 0.0040740966796875 1 Unmodified _IPVEFKLVI_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19756233-19756668:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1;nc|ENSG00000105726|Q9HD20-3|ATP13A1 72.96794272382148 0.0199516581995792 4 {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L} 9 0 + 72.418 0.0 0.0 6.8535 6.8535 84.799 0.0 0.0 0.0 19.845143534448013 5.752574989159953 5.752574989159953 5.752574989159953 0 1.6791746928241125 1.5228787452803376 0.7059771852360797 0.3494850021680094 + + {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L};[VP]E{M(Oxidation (M))|F}K{I|L}V{I|L}{I|L};[VP]E{M(Oxidation (M))|F}K{I|L}{I|L}V{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L}VPV{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L}VP{I|L}V{I|L};[{I|L}P]D{M(Oxidation (M))|F}K{I|L}V{I|L}{I|L};[{I|L}P]D{M(Oxidation (M))|F}K{I|L}{I|L}V{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L}VVP{I|L}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L}V{I|L}PV{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EV{I|L}PV{I|L}{I|L} 6.8535;6.3091;6.2445;6.1516;6.087;5.9746;5.91;5.6247;5.3501;5.1298 +;-;-;-;-;-;-;-;-;- + 856 + 1 1.948 63533.5 1.0 14049 5562 19612 HBL1_DMSO_200M_050219_2,19613 HBL1_DMSO_200M_050219_2,19613,IPVEFKLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19614 106.51 800.0 93188.0 25 0 15501.0 + 11749 GLIGVGLINV 10 97 477.80290507072056 953.5912572082412 2 477.8031799197197 MULTI CID FTMS 0 0 0 19612 89516.0859375 0.4615961103980092 -30 0.2364578247070312 2 Unmodified _GLIGVGLINV_ ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-3|SBNO1 53.57557251787612 0.059165173252085 4 {[VA]|[{I|L}G]}K{I|L}G{I|L} 6 6 44.574 0.0 0.0 4.6743 0.0 0.0 0.0 369.1776323393572 369.1776323393572 20.08766676360993 0.0 0.0 0.0 0 0.0 2.0 0.0 1.348136244196333 {[VA]|[{I|L}G]}K{I|L}G{I|L} 4.6743 - 422 1 1.948 63272.7 0.3400000035762787 14050 5562 19612 HBL1_DMSO_200M_050219_2,19614 HBL1_DMSO_200M_050219_2,19614,GLIGVGLINV True True GLIGVGLINV 106.51124 477.80317991972 2744756.25 19612.0 nc|ENSG00000139697|A3KN83-3|SBNO1;;ENSG00000139697|ENST00000602398|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1 4.979073365529378 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19620 106.54 572.0 163090.0 25 0 18283.0 + -1 GQLPEELFL 9 82 1045.555377543183 0 1045.558764636517 PEAK CID FTMS 0 0 0 19619 92716.90625 0.5678978222972756 15 -0.09814453125 1 ENSG00000277150|ENST00000622749|F8A3 4 {I|L}{M(Oxidation (M))|F}{I|L}QG{I|L}E 7 -1 53.734 0.0 0.0 2.5721 0.0 0.0 1062.5505001041415 223.0729158990844 1285.623416003226 0.0 0.0 0.0 0.0 0 0.0 0.0 1.661954370472159 0.9604093769761876 {I|L}{M(Oxidation (M))|F}{I|L}QG{I|L}E 2.5721 - 1593 + 1 1.948 65864.4 1.0 14051 5567 19619 HBL1_DMSO_200M_050219_2,19620 HBL1_DMSO_200M_050219_2,19620, False False GQLPEELFL 106.5401 1045.55876463652 43121056.0 19619.0 ENSG00000277150|ENST00000622749|F8A3 6.41086212793986 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19623 106.55 28.0 2465600.0 25 0 595070.0 + 33494 SIIGRLLEV 9 72 500.3139015696353 998.6132502060708 2 500.3134643435478 MULTI CID FTMS 0 0 0 19622 1968867.625 0.390168059991233 38 -0.23321533203125 1 Unmodified _SIIGRLLEV_ ENSG00000172531|ENST00000376745|PPP1CA 40.23920728925047 0.0741434193262949 4 S{I|L}EV 4 5 29.641 0.0 0.0 2.9682 0.0 0.0 552.3773060529312 0.0 552.3773060529312 0.0 10.713337517843655 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 S{I|L}EV 2.9682 - 70 1 1.948 60184.0 1.0 14052 5569 19622 HBL1_DMSO_200M_050219_2,19623 HBL1_DMSO_200M_050219_2,19623,SIIGRLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19624 106.55 186.0 284530.0 25 0 27639.0 + 12670 GVLKVFLENV 10 86 559.3345596802882 1116.6545664273765 2 559.3342773318291 MULTI CID FTMS 0 0 0 19622 284543.34375 0.3906730798687188 54 -0.3314056396484375 2 Unmodified _GVLKVFLENV_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 32.78568957990786 0.2337485590374503 4 R{[CT]|[{M(Oxidation (M))|F}G]}{I|L}RKKNV 9 7 + 55.411 0.0 0.0 4.9622 4.9622 74.961 0.0 0.0 0.0 21.588709367037275 2.2454626555970947 2.2454626555970947 3.979400086720375 0 0.8807196863200843 0.0 0.0 0.5 R{[CT]|[{M(Oxidation (M))|F}G]}{I|L}RKKNV;R{[CT]|[{M(Oxidation (M))|F}G]}{I|L}KRKNV;R{[CT]|[{M(Oxidation (M))|F}G]}R{I|L}KKNV;R[KC]NKKKNV;R[KC]{I|L}TRKNV;[KC]RNKKKNV;R{[CT]|[{M(Oxidation (M))|F}G]}{I|L}RKKGGV;[KC]R{I|L}TRKNV;R[KC]GGKKKNV;[KC]{I|L}RTRKNV 4.9622;4.6059;4.3363;4.2654;4.0667;3.7463;3.6899;3.5476;3.4408;3.3899 -;-;-;-;-;-;-;-;-;- 3116 + 1 1.948 52505.3 1.0 14053 5569 19622 HBL1_DMSO_200M_050219_2,19624 HBL1_DMSO_200M_050219_2,19624,GVLKVFLENV False True GVLKVFLENV 106.55254 559.334277331829 36858852.0 19622.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 9.012651761372885 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19628 106.58 800.0 90899.0 25 0 7428.1 + + 43488 DAVSGMGVIVHII 13 92 655.8606263507004 1309.706699768201 2 655.8607055544853 MULTI CID FTMS 0 0 0 19627 66791.5 0.7662335380969708 1 -0.0163726806640625 1 Unmodified _WWGMLVRHLL_ ENSG00000277791|ENST00000619426|PSMB3 39.957323273325 0.1580177220464651 4 {[DA]|[EG]}VSGMGV{I|L}VH{I|L}{I|L} 13 -1 + 94.041 0.0 0.0 7.1803 7.1803 93.746 0.0 0.0 0.0 49.682345123213 10.332237293396616 10.332237293396616 21.902926039089763 0 2.385151878060192 1.6989700043360187 0.3807196863200844 0.0 {[DA]|[EG]}VSGMGV{I|L}VH{I|L}{I|L};{[DA]|[EG]}VS[MN]V{I|L}VH{I|L}{I|L};WWGMGV{I|L}VH{I|L}{I|L};WWGMR{I|L}VH{I|L}{I|L};{[DA]|[EG]}P[YN]GV{I|L}VH{I|L}{I|L};{[DA]|[EG]}P[YN]R{I|L}VH{I|L}{I|L};WW[MN]V{I|L}VH{I|L}{I|L};{[DA]|[EG]}VS[KG]P[WQ]P{I|L}{I|L};WVS[KG]PHHH{I|L}{I|L};{[DA]|[EG]}VS[KG]PV[W{I|L}]A[PA] 7.1803;5.5079;5.4005;5.2227;4.3758;4.1953;3.7332;3.3682;3.3016;3.154 -;-;-;-;-;-;-;-;-;- 1638 + 1 1.948 59481.8 0.8199999928474426 14054 5572 19627 HBL1_DMSO_200M_050219_2,19628 HBL1_DMSO_200M_050219_2,19628,WWGMLVRHLL False False DAVSGMGVIVHII 106.57689 655.860705554485 619799.8125 19627.0 ENSG00000277791|ENST00000619426|PSMB3 6.576621214548747 2.0 False 13.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19632 106.6 800.0 167210.0 25 0 13495.0 + 7384 EGGDALLVSLV 11 70 1072.5875297554262 1071.5802532888265 1 1072.585498034954 MULTI CID FTMS 0 0 0 19631 114617.140625 0.903598152596486 7 -0.040618896484375 1 Unmodified _EGGDALLVSLV_ ENSG00000241945|ENST00000291576|PWP2 75.76082778847304 0.0157096510099958 4 E{I|L}VS{I|L}V 6 5 56.534 0.0 0.0 5.2757 0.0 0.0 413.19175917793126 0.0 413.19175917793126 0.0 18.838031200885155 0.0 0.0 0 0.3252574989159953 0.0 2.2302046884880937 0.0 E{I|L}VS{I|L}V 5.2757 - 937 1 1.948 88911.5 0.4000000059604645 14055 5575 19631 HBL1_DMSO_200M_050219_2,19632 HBL1_DMSO_200M_050219_2,19632,EGGDALLVSLV True True EGGDALLVSLV 106.60142 1072.58549803495 927129.5 19631.0 ENSG00000241945|ENST00000291576|PWP2 4.381000439325969 1.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19643 106.64 35.0 1999400.0 25 0 189740.0 + 14657 IIMLEALERV 10 59 593.8467597962742 1185.6789666593484 2 593.8470336794853 MULTI CID FTMS 0 0 0 19642 1287620.75 0.9569205950224544 -3 0.0120086669921875 1 Unmodified _IIMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 29.43715596616401 0.3072975788498757 4 {I|L}{I|L}M{I|L}EA{I|L}E[RV] 10 0 + 85.623 0.0 0.0 7.2214 7.2214 95.757 0.0 0.0 0.0 64.7074504521148 4.884381005764311 4.884381005764311 85.6226002633283 0 0.9247425010840048 2.0 0.0 0.0 + + {I|L}{I|L}M{I|L}EA{I|L}E[RV] 7.2214 + + 152 + 1 1.948 62035.0 1.0 14056 5585 19642 HBL1_DMSO_200M_050219_2,19643 HBL1_DMSO_200M_050219_2,19643,IIMLEALERV False True IIMLEALERV 106.64243 593.847033679485 22401072.0 19642.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 6.233835697174072 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19647 106.67 800.0 109020.0 25 0 7106.3 + 2797 ATVAAAWLL 9 98 915.5292344268806 914.5219579602806 1 915.5284911990166 MULTI CID FTMS 0 0 0 19646 56526.171875 0.2485792843667856 38 -0.237030029296875 1 Unmodified _ATVAAAWLL_ ENSG00000116157|ENST00000361314|GPX7;ENST00000459779.1_1_1:53068081-53072661:+|nuORF 77.98433622928108 0.0180125044636492 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ARDA{I|L}{I|L} 8 5 + 62.815 0.0 0.0 6.8686 6.8686 76.163 0.0 0.0 0.0 8.380456295278407 42.05788253186937 8.380456295278407 0.5102999566398125 0 0.5941876774005248 0.0 1.924742501084005 0.25 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ARDA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RADA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ARD{I|L}A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RAD{I|L}A{I|L};[W{I|L}]AAASA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L}ASA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AA{I|L}SA{I|L}{I|L};[W{I|L}]AQTA{I|L}{I|L};[W{I|L}]AAGTA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L}GTA{I|L}{I|L} 6.8686;6.8128;5.969;5.9132;5.8329;5.7577;5.7577;5.6462;5.5903;5.5151 -;-;-;-;-;-;-;-;-;- 1407 1 1.948 62179.4 0.8600000143051147 14057 5588 19646 HBL1_DMSO_200M_050219_2,19647 HBL1_DMSO_200M_050219_2,19647,ATVAAAWLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19657 106.72 800.0 19359.0 25 0 945.46 -1 0 39 1173.131518542767 0 1173.131518542767 PEAK CID FTMS 0 0 0 -1 0 1 4 G 1 -1 6.9897 0.0 0.0 0.29816 0.0 0.0 1821.992821165809 462.2098177545532 2284.2026389203625 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.29816 - 2 + 1 1.948 18195.8 0.3499999940395355 14058 5597 19656 HBL1_DMSO_200M_050219_2,19657 HBL1_DMSO_200M_050219_2,19657, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19658 106.72 463.0 190840.0 25 0 47471.0 + 6641 EAVIMAVGI 9 77 902.4995849863462 901.4923085197462 1 902.4973632693292 MULTI CID FTMS 0 0 0 19656 87038.5703125 0.4892922091907524 31 -0.1964340209960937 2 Unmodified _EAVIMAVGI_ ENSG00000178719|ENST00000395068|GRINA;ENST00000533377.1_1_8:145066406-145067006:+|nuORF 39.957323273325 0.0756908302845263 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GA{I|L}VG{I|L} 9 4 + 57.203 0.0 0.0 6.3454 6.3454 78.122 0.0 0.0 0.0 13.952424927286842 38.39825534910951 13.952424927286842 2.614393726401687 0 0.0 0.0 0.8609243748081783 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GA{I|L}VG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{I|L}AVG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GAV{I|L}G{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}Q{I|L}VG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VAA{I|L}VG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AG{I|L}VG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}G{I|L}G{I|L}G{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA{I|L}AVG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AVAVG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GA{I|L}GV{I|L} 6.3454;6.0553;5.7072;5.6268;5.6208;5.57;5.4172;5.3308;5.28;5.1633 -;-;-;-;-;-;-;-;-;- 1035 1 1.948 64744.1 1.0 14059 5597 19656 HBL1_DMSO_200M_050219_2,19658 HBL1_DMSO_200M_050219_2,19658,EAVIMAVGI True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19665 106.75 347.0 221950.0 25 0 19836.0 + 15510 IPVEFKLVI 9 89 529.3366561812804 1056.6587594293608 2 529.3365966677666 MULTI CID FTMS 0 0 0 19664 190675.984375 0.2802428394365079 40 -0.2120590209960937 1 Unmodified _IPVEFKLVI_ ENSG00000105726|ENST00000357324|ATP13A1;ENST00000469641.5_1_19:19756233-19756668:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1;nc|ENSG00000105726|Q9HD20-3|ATP13A1 66.45667989310934 0.0225072657982126 4 {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L} 9 0 + 61.033 0.0 0.0 5.776 5.776 90.184 0.0 0.0 0.0 26.959858492243 10.792805247043376 10.792805247043376 61.03253456398676 0 1.4489700043360187 1.3979400086720375 0.3054621874040891 0.0 + + {I|L}PVE{M(Oxidation (M))|F}K{I|L}V{I|L} 5.776 + + 446 + 1 1.948 71539.5 1.0 14060 5603 19664 HBL1_DMSO_200M_050219_2,19665 HBL1_DMSO_200M_050219_2,19665,IPVEFKLVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19667 106.77 800.0 132880.0 25 0 23753.0 + 11750 GLIGVGLINV 10 115 477.80290507072056 953.5912572082412 2 477.8029662966728 MULTI CID FTMS 0 0 0 19666 106060.0859375 0.546906431670954 12 -0.0880889892578125 1 Unmodified _GLIGVGLINV_ ENSG00000139697|ENST00000602398|SBNO1;nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-3|SBNO1 53.57557251787612 0.059165173252085 4 {[VA]|[{I|L}G]}K{I|L}G{I|L} 6 6 46.863 0.0 0.0 4.9144 0.0 0.0 0.0 369.1767423979474 369.1767423979474 17.000971037264613 0.0 0.0 0.0 0 0.0 2.0 0.0 1.3754223615525998 {[VA]|[{I|L}G]}K{I|L}G{I|L} 4.9144 - 1557 1 1.948 87455.1 0.4199999868869781 14061 5604 19666 HBL1_DMSO_200M_050219_2,19667 HBL1_DMSO_200M_050219_2,19667,GLIGVGLINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19674 106.81 800.0 231040.0 25 0 34539.0 + 24016 LVYEAIIMV 9 88 1050.590116351301 1049.5828398847011 1 1050.591357409954 MULTI CID FTMS 0 0 0 19673 126522.8671875 0.146138108688044 101 -0.8450927734375 1 Unmodified _LVYEAIIMV_ ENSG00000150593|ENST00000280154|PDCD4;nc|ENSG00000150593|Q53EL6-2|PDCD4 70.71552829651908 0.0208223590022201 4 [YE]A{I|L}V{I|L}{I|L}MV 9 4 + 68.408 0.0 0.0 6.5176 6.5176 78.123 0.0 0.0 0.0 2.218487496163561 8.080371765640422 2.218487496163561 2.218487496163561 0 0.6307196863200843 0.0 0.9247425010840048 0.0 [YE]A{I|L}V{I|L}{I|L}MV;{[CP]|[EA]}Y{I|L}V{I|L}{I|L}MV;[YE]AV{I|L}{I|L}{I|L}MV;{I|L}{I|L}ADY{I|L}{I|L}MV;[{M(Oxidation (M))|F}T]D{I|L}V{I|L}{I|L}MV;[{I|L}A]{I|L}DY{I|L}{I|L}MV;[{M(Oxidation (M))|F}T]D{I|L}V{I|L}M{I|L}V;{[CP]|[EA]}YV{I|L}{I|L}{I|L}MV;[{I|L}A]EYV{I|L}{I|L}MV;[YE]A{I|L}{I|L}V{I|L}MV 6.5176;6.3063;6.2308;6.2191;6.1549;6.1001;6.0346;6.0195;5.944;5.9209 -;-;-;-;-;-;-;-;-;- 8093 1 1.948 121664.1 0.4399999976158142 14062 5610 19673 HBL1_DMSO_200M_050219_2,19674 HBL1_DMSO_200M_050219_2,19674,LVYEAIIMV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19676 106.81 152.0 367420.0 25 0 79050.0 + 33495 SIIGRLLEV 9 71 500.3139015696353 998.6132502060708 2 500.3134643435478 MULTI CID FTMS 0 0 0 19675 279516.15625 0.0553913706718951 80 -0.6066131591796875 1 Unmodified _SIIGRLLEV_ ENSG00000172531|ENST00000376745|PPP1CA 34.93206674587334 0.1032771302489716 4 {I|L}{I|L}S{I|L}EV 6 4 32.841 0.0 0.0 3.2887 0.0 0.0 326.2060719220719 0.0 326.2060719220719 0.0 19.10396270529162 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}{I|L}S{I|L}EV 3.2887 - 111 1 1.948 48090.7 1.0 14063 5611 19675 HBL1_DMSO_200M_050219_2,19676 HBL1_DMSO_200M_050219_2,19676,SIIGRLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19677 106.82 263.0 127470.0 25 0 12858.0 + 12671 GVLKVFLENV 10 69 559.3345596802882 1116.6545664273765 2 559.3343383669853 MULTI CID FTMS 0 0 0 19675 139132.25 0.191026168105767 96 -0.7953567504882812 2 Unmodified _GVLKVFLENV_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 29.081581746732265 0.3152867722954398 4 DE{I|L}RKKNV 8 7 29.914 0.0 0.0 2.6789 0.0 0.0 116.09989221038252 0.0 116.09989221038252 0.0 16.682437647924218 0.0 0.0 0 0.0 0.0 0.0 0.5 DE{I|L}RKKNV 2.6789 - 174 + 1 1.948 33109.0 1.0 14064 5611 19675 HBL1_DMSO_200M_050219_2,19677 HBL1_DMSO_200M_050219_2,19677,GVLKVFLENV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19678 106.82 478.0 103950.0 25 0 8864.1 + 16225 IVLTGILEQV 10 83 542.834691071109 1083.654829209018 2 542.8346435427666 MULTI CID FTMS 0 0 0 19675 92876.9765625 0.706610111323198 -9 0.065643310546875 3 Unmodified _IVLTGILEQV_ ENSG00000069329|ENST00000299138|VPS35;ENST00000568642.5_1_16:46706372-46712929:-|nuORF;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENST00000569950.1_1_16:46710493-46715410:-|nuORF 49.93300154707207 0.0805441195901191 4 [{I|L}V]ATV{I|L}{I|L} 7 5 57.941 0.0 0.0 5.3468 0.0 0.0 0.0 371.1549872502866 371.1549872502866 38.12067450298896 0.0 0.0 0.0 0 0.2887254899964357 2.0 1.110924374808178 0.0 [{I|L}V]ATV{I|L}{I|L} 5.3468 - 305 1 1.948 44761.0 1.0 14065 5611 19675 HBL1_DMSO_200M_050219_2,19678 HBL1_DMSO_200M_050219_2,19678,IVLTGILEQV True True IVLTGILEQV 106.82471 542.834643542767 795199.3125 19675.0 ENST00000568642.5_1_16:46706372-46712929:-|nuORF;;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENST00000569950.1_1_16:46710493-46715410:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 5.214764436086019 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19687 106.86 439.0 122730.0 25 0 12200.0 + 35405 STIDILYQL 9 91 533.2952963518791 1064.576039770558 2 533.2950927615166 MULTI CID FTMS 0 0 0 19686 106151.015625 0.6386879533037232 -31 0.2025985717773437 1 Unmodified _STIDILYQL_ ENSG00000115760|ENST00000421745|BIRC6 67.34385681178166 0.0221257235307089 4 {[QN]|[E{I|L}]|[KN]}SS{I|L}{I|L} 6 6 38.114 0.0 0.0 3.5802 0.0 0.0 0.0 419.1941177337018 419.1941177337018 11.37492705584647 0.0 0.0 0.0 0 0.2887254899964357 0.7958800173440752 1.424742501084005 0.0 {[QN]|[E{I|L}]|[KN]}SS{I|L}{I|L} 3.5802 - 320 1 1.948 47693.4 1.0 14066 5619 19686 HBL1_DMSO_200M_050219_2,19687 HBL1_DMSO_200M_050219_2,19687,STIDILYQL True True STIDILYQL 106.86352 533.295092761517 7596967.5 19686.0 ENSG00000115760|ENST00000421745|BIRC6 4.389348189036052 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19717 106.99 800.0 123090.0 25 0 9180.4 + 21374 LPFRVIPLV 9 84 527.3449146746467 1052.6752764160933 2 527.3446533083916 MULTI CID FTMS 0 0 0 19716 46384.3125 0.1610377690114439 -18 0.0725784301757812 1 Unmodified _LPFRVIPLV_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000461733.5_1_3:183898306-183901401:+|nuORF;ENST00000480260.1_1_3:183899436-183900037:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 49.55428908609986 0.0413471690215031 4 {I|L}{I|L}T{I|L}VWP{I|L} 8 5 51.024 0.0 0.0 4.847 0.0 0.0 0.0 114.05651270084218 114.05651270084218 25.693897340162906 0.0 0.0 0.0 0 1.0924778212679485 1.0 0.0 0.0 {I|L}{I|L}T{I|L}VWP{I|L} 4.847 - 462 + 1 1.948 85298.6 0.3600000143051147 14067 5648 19716 HBL1_DMSO_200M_050219_2,19717 HBL1_DMSO_200M_050219_2,19717,LPFRVIPLV True True LPFRVIPLV 106.99263 527.344653308392 4739854.5 19716.0 ENST00000461733.5_1_3:183898306-183901401:+|nuORF;;ENST00000480260.1_1_3:183899436-183900037:+|nuORF;;nc|ENSG00000161203|Q96CW1-2|AP2M1;;ENSG00000161203|ENST00000292807|AP2M1 6.642666339874268 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19720 107.01 599.0 118240.0 25 0 15562.0 + 24640 MLPSILNQL 9 88 514.7940522397328 1027.5735515462654 2 514.7941772341728 MULTI CID FTMS 0 0 0 19719 91679.8359375 0.6211901019671182 -6 0.0365219116210937 1 Unmodified _MLPSILNQL_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 50.855029805455786 0.0384952370514206 4 [PS]{I|L}{I|L}NQ 6 3 41.577 0.0 0.0 4.0461 0.0 0.0 0.0 372.1951295170282 372.1951295170282 15.446414695458838 0.0 0.0 0.0 0 0.0 0.0 0.9436726795685344 0.8494850021680094 + [PS]{I|L}{I|L}NQ 4.0461 + + 284 1 1.948 57175.3 1.0 14068 5650 19719 HBL1_DMSO_200M_050219_2,19720 HBL1_DMSO_200M_050219_2,19720,MLPSILNQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19721 107.02 800.0 226480.0 25 0 22141.0 + 14658 IIMLEALERV 10 93 593.8467597962742 1185.6789666593484 2 593.8470336794853 MULTI CID FTMS 0 0 0 19719 137286.875 0.1020274316904052 62 -0.642578125 2 Unmodified _IIMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 49.52724829834842 0.0829255630816734 4 {I|L}{I|L}M{I|L}EA{I|L}E[RV] 10 0 + 96.732 0.0 0.0 8.1584 8.1584 95.02 0.0 0.0 0.0 59.17349402358865 4.884381005764311 4.884381005764311 14.943415770716156 0 1.2302046884880935 2.0 0.805462187404089 0.0 + + {I|L}{I|L}M{I|L}EA{I|L}E[RV];{I|L}{I|L}M{I|L}V[DV]E[RV];{I|L}{I|L}M{I|L}VE[DV][RV];{I|L}{I|L}M{I|L}EV[DV][RV];{I|L}{I|L}MV{I|L}[DV]E[RV];{I|L}{I|L}MV[DV]{I|L}E[RV];{I|L}{I|L}M{I|L}VE[K{I|L}]{NN|[MP]|[D{I|L}]|[EV]};{I|L}{I|L}M{I|L}EV[K{I|L}]{NN|[MP]|[D{I|L}]|[EV]};{I|L}{I|L}MV{I|L}E[DV][RV];{I|L}{I|L}VM{I|L}[DV]E[RV] 8.1584;6.898;6.5624;6.4952;6.0654;5.9982;5.9061;5.8389;5.7298;5.7109 +;-;-;-;-;-;-;-;-;- + 1446 + 1 1.948 136466.0 0.9800000190734864 14069 5650 19719 HBL1_DMSO_200M_050219_2,19721 HBL1_DMSO_200M_050219_2,19721,IIMLEALERV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19722 107.04 790.0 262120.0 25 0 32662.0 + 26280 NQTEEDILV 9 79 1060.5159764781602 1059.5087000115602 1 1060.516772449017 MULTI CID FTMS 0 0 0 19719 116212.03125 0.2424890873601955 -22 0.1009902954101562 3 Unmodified _NQTEEDILV_ ENSG00000166394|ENST00000299498|CYB5R2;nc|ENSG00000166394|Q6BCY4-2|CYB5R2 43.85829265575387 0.0542763391141878 4 V{I|L}D{I|L}{I|L}V 6 5 53.549 0.0 0.0 5.0541 0.0 0.0 389.0826748636644 0.0 389.0826748636644 0.0 42.9830766005645 0.0 0.0 0 0.0 0.0 0.9392404878284264 0.0 V{I|L}D{I|L}{I|L}V 5.0541 - 543 1 1.948 131022.5 1.0 14070 5650 19719 HBL1_DMSO_200M_050219_2,19722 HBL1_DMSO_200M_050219_2,19722,NQTEEDILV True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19724 107.05 286.0 223730.0 25 0 36999.0 + 21378 LPFRVLLV 8 64 478.8185854071626 955.6226178811252 2 478.8184081912041 MULTI CID FTMS 0 0 0 19723 174517.875 0.870584785516911 -2 0.04461669921875 1 Unmodified _LPFRVLLV_ ENSG00000005448|ENST00000348227|WDR54;ENST00000461531.5_1_2:74648856-74650350:+|nuORF;ENST00000469932.5_1_2:74649280-74650140:+|nuORF;nc|ENSG00000005448|Q9H977-3|WDR54;nc|ENSG00000005448|Q9H977-4|WDR54 50.855029805455786 0.1352255786796883 4 {I|L}{I|L}MRV{I|L}{I|L}V 8 2 + 40.596 0.0 0.0 4.2481 4.2481 83.442 0.0 0.0 0.0 0.757659435244733 4.405367682672363 0.757659435244733 40.59562510389476 0 0.7742275032520141 1.2218487496163564 0.0 0.0 {I|L}{I|L}MRV{I|L}{I|L}V 4.2481 - 70 1 1.948 57827.9 1.0 14071 5651 19723 HBL1_DMSO_200M_050219_2,19724 HBL1_DMSO_200M_050219_2,19724,LPFRVLLV False True LPFRVLLV 107.04637 478.818408191204 1545846.125 19723.0 ENSG00000005448|ENST00000348227|WDR54;;ENST00000461531.5_1_2:74648856-74650350:+|nuORF;;nc|ENSG00000005448|Q9H977-3|WDR54;;ENST00000469932.5_1_2:74649280-74650140:+|nuORF;;nc|ENSG00000005448|Q9H977-4|WDR54 5.703736623128255 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19727 107.06 456.0 120890.0 25 0 9216.4 + 3356 AYPEYLITF 9 76 558.7845045340981 1115.554456134996 2 558.7838012576103 MULTI CID FTMS 0 0 0 19726 72752.4375 0.2003165204740631 -35 0.2013473510742187 1 Unmodified _AYPEYLITF_ ENSG00000173193|ENST00000474629|PARP14;ENSG00000173200|ENST00000464300|PARP15;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;nc|ENSG00000173200|Q460N3-2|PARP15 16.942295170755138 0.3780752226737986 4 [VG][K{I|L}]V{M(Oxidation (M))|F}{I|L}ED 9 8 27.571 0.0 0.0 2.4715 0.0 0.0 0.0 111.96873771142114 111.96873771142114 -0.7597610617241344 0.0 -0.7597610617241344 0.0 0 0.0 1.3010299956639813 0.0 0.0 [VG][K{I|L}]V{M(Oxidation (M))|F}{I|L}ED 2.4715 - 335 1 1.948 49312.4 1.0 14072 5653 19726 HBL1_DMSO_200M_050219_2,19727 HBL1_DMSO_200M_050219_2,19727,AYPEYLITF False True AYPEYLITF 107.06109 558.78380125761 3344358.5 19726.0 nc|ENSG00000173193|Q460N5-3|PARP14;;nc|ENSG00000173200|Q460N3-2|PARP15;;nc|ENSG00000173193|Q460N5-1|PARP14;;ENSG00000173193|ENST00000474629|PARP14;;ENSG00000173200|ENST00000464300|PARP15;;nc|ENSG00000173193|Q460N5-5|PARP14 4.494591315587361 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19729 107.08 766.0 124860.0 25 0 27471.0 + 33496 SIIGRLLEV 9 96 500.3139015696353 998.6132502060708 2 500.3131896853447 MULTI CID FTMS 0 0 0 19728 113417.09375 0.0224757250697752 123 -1.1192092895507812 1 Unmodified _SIIGRLLEV_ ENSG00000172531|ENST00000376745|PPP1CA 49.52724829834842 0.0414064571532091 4 {[TV]|[{I|L}S]}{I|L}GR{I|L}{I|L}EV 9 0 + 61.199 0.0 0.0 6.1284 6.1284 89.401 0.0 0.0 0.0 19.000065532235126 16.478174818886373 16.478174818886373 17.37818021115855 0 1.9564608101803795 2.0 0.3252574989159953 0.0 + + {[TV]|[{I|L}S]}{I|L}GR{I|L}{I|L}EV;{[TV]|[{I|L}S]}{I|L}GRE{I|L}{I|L}V;{[QN]|[E{I|L}]|[KN]}KR{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}K[VG]{I|L}{I|L}EV;[{I|L}T]VGR{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}KRE{I|L}{I|L}V;[{I|L}T]R[VG]{I|L}{I|L}EV;{[TV]|[{I|L}S]}[KA][{I|L}V]{I|L}QQ;{[TV]|[{I|L}S]}{I|L}G[K{I|L}]{I|L}QQ;HH{I|L}[K{I|L}]RPV 6.1284;4.3882;4.2257;3.2982;2.6451;2.4855;2.251;2.0233;1.9211;1.9032 +;-;-;-;-;-;-;-;-;- + 499 1 1.948 78590.6 1.0 14073 5654 19728 HBL1_DMSO_200M_050219_2,19729 HBL1_DMSO_200M_050219_2,19729,SIIGRLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19730 107.09 800.0 104720.0 25 0 23243.0 + 26281 NQTEEDILV 9 81 530.7617685763939 1059.5089842195878 2 530.7620117068291 MULTI CID FTMS 0 0 0 19728 87356.5234375 0.4669145461698854 -13 0.1129226684570312 2 Unmodified _NQTEEDILV_ ENSG00000166394|ENST00000299498|CYB5R2;nc|ENSG00000166394|Q6BCY4-2|CYB5R2 19.256988751693697 0.3154191944385105 4 VEV{I|L}{I|L}V 6 5 35.846 0.0 0.0 3.3833 0.0 0.0 389.0826484556658 0.0 389.0826484556658 0.0 17.18379398022847 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.0 VEV{I|L}{I|L}V 3.3833 - 144 1 1.948 71999.9 0.3400000035762787 14074 5654 19728 HBL1_DMSO_200M_050219_2,19730 HBL1_DMSO_200M_050219_2,19730,NQTEEDILV False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19731 107.1 656.0 16887.0 25 0 3415.0 -1 0 22 1093.947192370892 0 1093.947192370892 PEAK CID FTMS 0 0 0 -1 0 3 4 RM 2 -1 10.969 0.0 0.0 0.50182 0.0 0.0 1440.5030750720591 455.1972139947876 1895.7002890668464 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 RM 0.50182 - 3 + 1 1.948 17247.7 1.0 14075 5654 19728 HBL1_DMSO_200M_050219_2,19731 HBL1_DMSO_200M_050219_2,19731, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19734 107.12 659.0 194470.0 25 0 29943.0 + + 15056 RVIDYILDL 9 85 560.3240109094728 1118.6334688857455 2 560.3238403201103 MULTI CID FTMS 0 0 0 19733 99150.46875 0.0914699328612483 -32 0.2266159057617187 1 Unmodified _ILYRVDIDL_ ENSG00000117318|ENST00000374561|ID3;ID3|p.I69T|1|0.57|ENSG00000117318|chr1:23559221-23559221|A/G|missense_variant 36.12702656103203 0.0967173616627612 4 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L} 9 -1 + 71.845 0.0 0.0 6.4226 6.4226 88.326 0.0 0.0 0.0 14.164317917986224 16.478174818886373 14.164317917986224 9.542425094393252 0 1.424742501084005 1.5228787452803376 0.0 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}Y[RV]{I|L}D{I|L};[DV][R{I|L}]Y{I|L}{I|L}D{I|L};{I|L}{I|L}DY[RV]{I|L}D{I|L} 6.4226;5.5695;5.1564;3.9922 -;-;-;- 124 1 1.948 100516.0 1.0 14076 5656 19733 HBL1_DMSO_200M_050219_2,19734 HBL1_DMSO_200M_050219_2,19734,ILYRVDIDL False False RVIDYILDL 107.12026 560.3255 24341902.5 19733.0 ENSG00000117318|ENST00000374561|ID3;;ID3|p.I69T|1|0.57|ENSG00000117318|chr1:23559221-23559221|A/G|missense_variant 3.744443416595459 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19735 107.13 800.0 145060.0 25 0 18103.0 + 24642 MLPSILNQL 9 93 1028.5801431629282 1027.5728666963282 1 1028.582812488079 MULTI CID FTMS 0 0 0 19733 89809.453125 0.9546619828842632 -8 0.1299896240234375 2 Unmodified _MLPSILNQL_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 144.35026110057638 0.0323574850971273 4 [PS]{I|L}{I|L}M{I|L}NQ{I|L} 9 4 + 93.114 0.0 0.0 9.0616 9.0616 84.621 0.0 0.0 0.0 18.42014606245825 16.478174818886373 16.478174818886373 2.7114406948358294 0 1.4489700043360187 0.0 2.4049471895720984 0.7742275032520141 [PS]{I|L}{I|L}M{I|L}NQ{I|L};[PS]{I|L}M{I|L}{I|L}NQ{I|L};[PS]{I|L}{I|L}M{I|L}N[AG]{I|L};[PS]{I|L}M{I|L}{I|L}N[AG]{I|L};[PS]{I|L}{I|L}M{I|L}GGQ{I|L};[PS]{I|L}{I|L}{I|L}MNQ{I|L};[PS]{I|L}M{I|L}{I|L}GGQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PS{I|L}{I|L}NQ{I|L};{[QN]|[E{I|L}]|[KN]}VS{I|L}{I|L}NQ{I|L};{[QG]|[NA]}GVS{I|L}{I|L}NQ{I|L} 9.0616;8.7977;8.1655;7.9016;7.8253;7.6322;7.5615;7.269;7.0753;7.0308 -;-;-;-;-;-;-;+;-;- + 2485 1 1.948 79670.9 0.3600000143051147 14077 5656 19733 HBL1_DMSO_200M_050219_2,19735 HBL1_DMSO_200M_050219_2,19735,MLPSILNQL True True MLPSILNQL 107.13413 1028.58281248808 3188045.375 19733.0 nc|ENSG00000145741|P20290-2|BTF3;;ENSG00000145741|ENST00000380591|BTF3 5.579377810160319 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19738 107.15 800.0 168080.0 25 0 25120.0 + 42906 VVPQLFITV 9 68 1015.6185973224184 1014.6113208558183 1 1015.618701159954 MULTI CID FTMS 0 0 0 19737 88819.8984375 0.2265851307164532 49 -0.4629745483398437 1 Unmodified _VVPQLFITV_ ENSG00000142583|ENST00000377424|SLC2A5;nc|ENSG00000142583|P22732-2|SLC2A5 49.93300154707207 0.0405168250806675 4 [QP]{I|L}{M(Oxidation (M))|F}{I|L}VVTV 9 4 + 64.681 0.0 0.0 6.3749 6.3749 75.911 0.0 0.0 0.0 12.508899526915542 42.923377782955214 12.508899526915542 1.320684442917603 0 0.0 0.0 0.4247425010840047 0.8829131673969606 [QP]{I|L}{M(Oxidation (M))|F}{I|L}VVTV;[QP]{I|L}{M(Oxidation (M))|F}{I|L}VTVV;[QP]{I|L}{M(Oxidation (M))|F}{I|L}TVVV;[QP]{I|L}VV{M(Oxidation (M))|F}{I|L}TV;[QP]{I|L}{M(Oxidation (M))|F}{I|L}VS{I|L}V;[QP]{I|L}{M(Oxidation (M))|F}VV{I|L}TV;[QP]{I|L}{M(Oxidation (M))|F}V{I|L}VTV;[QP]{I|L}{M(Oxidation (M))|F}V{I|L}TVV;[QP]{I|L}VV{M(Oxidation (M))|F}T{I|L}V;[QP]{I|L}V{M(Oxidation (M))|F}V{I|L}TV 6.3749;6.2447;6.1311;5.9333;5.7311;5.6322;5.6201;5.4899;5.2895;5.162 -;-;-;-;-;-;-;-;-;- 1154 1 1.948 94220.5 0.3899999856948852 14078 5658 19737 HBL1_DMSO_200M_050219_2,19738 HBL1_DMSO_200M_050219_2,19738,VVPQLFITV True True VVPQLFITV 107.15459 1015.61870115995 9249777.0 19737.0 ENSG00000142583|ENST00000377424|SLC2A5;;nc|ENSG00000142583|P22732-2|SLC2A5 4.922479470570882 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19742 107.18 800.0 11972.0 25 0 1126.0 -1 0 31 925.0167724490166 0 925.0167724490166 PEAK CID FTMS 0 0 0 -1 0 1 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.948 17508.5 0.3300000131130218 14079 5661 19741 HBL1_DMSO_200M_050219_2,19742 HBL1_DMSO_200M_050219_2,19742, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19745 107.19 199.0 612980.0 25 0 37161.0 + 35406 STIDILYQL 9 105 1065.5821361654782 1064.5748596988783 1 1065.581957995892 MULTI CID FTMS 0 0 0 19744 308575.03125 0.3919617288771812 16 -0.1070404052734375 1 Unmodified _STIDILYQL_ ENSG00000115760|ENST00000421745|BIRC6 115.6920309560759 0.0032017028976397 4 {NN|[MP]|[D{I|L}]|[EV]}TS{I|L}{I|L}YQ{I|L} 9 4 + 88.215 0.0 0.0 8.2864 8.2864 87.682 0.0 0.0 0.0 8.692803136799157 16.478174818886373 8.692803136799157 5.242275032520141 0 1.110924374808178 0.9208187539523752 2.4802046884880937 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}TS{I|L}{I|L}YQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TS{I|L}Y{I|L}Q{I|L};{[MG]|[TS]}{I|L}D{I|L}{I|L}YQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TS{I|L}{I|L}Y[AG]{I|L};{[QN]|[E{I|L}]|[KN]}SS{I|L}{I|L}YQ{I|L};{[MG]|[TS]}{I|L}D{I|L}Y{I|L}Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}TS{I|L}Y{I|L}[AG]{I|L};{[TV]|[{I|L}S]}ES{I|L}{I|L}YQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[MG]|[TS]}{I|L}YQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}TS{I|L}YQ{I|L}{I|L} 8.2864;7.794;7.4699;7.4215;7.0758;6.9774;6.929;6.8559;6.8306;6.8067 -;-;+;-;-;-;-;-;-;- + 4437 1 1.948 82564.6 1.0 14080 5663 19744 HBL1_DMSO_200M_050219_2,19745 HBL1_DMSO_200M_050219_2,19745,STIDILYQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19748 107.21 800.0 171730.0 25 0 28806.0 + 43045 VYFPWVSQY 9 109 594.7900695650786 1187.5655861969572 2 594.7895995974541 MULTI CID FTMS 0 0 0 19747 59489.734375 0.6862455225477224 1 -0.0163650512695312 1 Unmodified _VYFPWVSQY_ ENSG00000138190|ENST00000260762|EXOC6;nc|ENSG00000138190|Q8TAG9-2|EXOC6 34.10243960390752 0.1078313939113124 4 [WP]VVYA{I|L}M 8 8 28.338 0.0 0.0 2.3862 0.0 0.0 0.0 225.03113730463213 225.03113730463213 12.84826562528984 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [WP]VVYA{I|L}M 2.3862 - 586 1 1.948 104812.7 0.8799999952316284 14081 5665 19747 HBL1_DMSO_200M_050219_2,19748 HBL1_DMSO_200M_050219_2,19748,VYFPWVSQY True True VYFPWVSQY 107.21001 594.789599597454 686729.3125 19747.0 nc|ENSG00000138190|Q8TAG9-2|EXOC6;;ENSG00000138190|ENST00000260762|EXOC6 6.310555299123128 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19755 107.24 186.0 360780.0 25 0 29871.0 + 21375 LPFRVIPLV 9 70 527.3449146746467 1052.6752764160933 2 527.3448364138603 MULTI CID FTMS 0 0 0 19754 255772.03125 0.8879932690179536 5 -0.0482177734375 1 Unmodified _LPFRVIPLV_ ENSG00000161203|ENST00000292807|AP2M1;ENST00000461733.5_1_3:183898306-183901401:+|nuORF;ENST00000480260.1_1_3:183899436-183900037:+|nuORF;nc|ENSG00000161203|Q96CW1-2|AP2M1 41.95555342248728 0.0647214845423414 4 PWVP{I|L}{I|L}V 7 5 49.557 0.0 0.0 4.7077 0.0 0.0 230.163377830275 0.0 230.163377830275 0.0 8.856150930823148 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 PWVP{I|L}{I|L}V 4.7077 - 104 1 1.948 60680.8 1.0 14082 5671 19754 HBL1_DMSO_200M_050219_2,19755 HBL1_DMSO_200M_050219_2,19755,LPFRVIPLV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19759 107.26 800.0 138350.0 25 0 77962.0 + -1 DAVISVLKKM 10 51 1119.6400868943567 1118.6328104277568 1 1120.654101550579 MULTI CID FTMS 0 0 0 19758 38860.10546875 0.3899920160553888 1 -0.0163955688476562 1 Oxidation (M) _DAVISVLKKM(Oxidation (M))_ REV__ENSG00000147162|ENST00000373719|OGT;REV__nc|ENSG00000147162|O15294-2|OGT;REV__nc|ENSG00000147162|O15294-3|OGT;REV__nc|ENSG00000147162|O15294-4|OGT 14.838274106304384 0.5985701837916485 4 {I|L}TV 3 -1 20.177 0.0 0.0 1.8037 0.0 0.0 421.23255515607553 381.17804895572505 802.4106041118006 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 {I|L}TV 1.8037 - 41 + 1 1.948 76589.7 0.3799999952316284 14083 5674 19758 HBL1_DMSO_200M_050219_2,19759 HBL1_DMSO_200M_050219_2,19759,DAVISVLKKM False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19761 107.28 800.0 103160.0 25 0 12840.0 + 24641 MLPSILNQL 9 95 514.7940522397328 1027.5735515462654 2 514.7947265505791 MULTI CID FTMS 0 0 0 19760 106951.5 0.7246654895393556 19 -0.2239303588867187 1 Unmodified _MLPSILNQL_ ENSG00000145741|ENST00000380591|BTF3;nc|ENSG00000145741|P20290-2|BTF3 57.47134341890925 0.0274820932774257 4 [PS]{I|L}{I|L}NQ 6 3 41.458 0.0 0.0 4.0345 0.0 0.0 0.0 372.1985059137844 372.1985059137844 10.24735947860492 0.0 0.0 0.0 0 0.0 0.0 1.031234684152075 0.75 + [PS]{I|L}{I|L}NQ 4.0345 + + 291 1 1.948 70000.1 0.4000000059604645 14084 5675 19760 HBL1_DMSO_200M_050219_2,19761 HBL1_DMSO_200M_050219_2,19761,MLPSILNQL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19773 107.33 800.0 96237.0 25 0 17056.0 + 33497 SIIGRLLEV 9 81 500.3139015696353 998.6132502060708 2 500.3138000369072 MULTI CID FTMS 0 0 0 19772 63852.578125 0.0126535863641263 155 -1.4408798217773438 1 Unmodified _SIIGRLLEV_ ENSG00000172531|ENST00000376745|PPP1CA 37.07464296494664 0.0915153923251136 4 {[TV]|[{I|L}S]}T[KP]{I|L}{I|L}E 8 4 46.38 0.0 0.0 4.6445 0.0 0.0 0.0 114.05536381374569 114.05536381374569 29.68092758854481 0.0 0.0 0.0 0 1.1549471895720984 2.0 0.6237125054200234 0.0 {[TV]|[{I|L}S]}T[KP]{I|L}{I|L}E 4.6445 - 239 1 1.948 64357.5 0.9100000262260436 14085 5686 19772 HBL1_DMSO_200M_050219_2,19773 HBL1_DMSO_200M_050219_2,19773,SIIGRLLEV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19775 107.35 800.0 140810.0 25 0 31581.0 4706 DDSGNDIIVL 10 88 530.7617685763939 1059.5089842195878 2 530.7620117068291 MULTI CID FTMS 0 0 0 19774 124848.6875 0.6673075572389859 20 -0.2664947509765625 1 Unmodified _DDSGNDIIVL_ ENSG00000044115|ENST00000302763|CTNNA1;ENSG00000066032|ENST00000402739|CTNNA2;ENST00000467892.1_1_2:80816479-80835548:+|nuORF;nc|ENSG00000044115|P35221-2|CTNNA1;nc|ENSG00000044115|P35221-3|CTNNA1;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-4|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;nc|ENSG00000066032|P26232-6|CTNNA2 17.11289562659939 0.5604042439455784 4 {NN|[MP]|[D{I|L}]|[EV]}[EC]EV{I|L} 7 7 28.834 0.0 0.0 2.7215 0.0 0.0 0.0 255.1307242921065 255.1307242921065 6.641274416268583 0.0 0.0 0.0 0 0.0 2.0 0.0 1.0629529932484498 {NN|[MP]|[D{I|L}]|[EV]}[EC]EV{I|L} 2.7215 - 161 1 1.948 98221.3 0.8600000143051147 14086 5687 19774 HBL1_DMSO_200M_050219_2,19775 HBL1_DMSO_200M_050219_2,19775,DDSGNDIIVL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19776 107.36 380.0 360930.0 25 0 39888.0 + 33664 SITVRSIQP 9 68 1000.5775969719476 999.5703205053476 1 1000.569689929485 MULTI CID FTMS 0 0 0 19774 176633.484375 0.0473693847766736 -39 0.3584136962890625 2 Unmodified _SITVRSIQP_ REV__ENSG00000152936|ENST00000458174|LMNTD1;REV__nc|ENSG00000152936|Q8N9Z9-4|LMNTD1;REV__nc|ENSG00000152936|Q8N9Z9|LMNTD1 24.020572477871973 0.2255576514309169 4 [EP]{I|L}{M(Oxidation (M))|F}V{I|L}P[VS] 9 -1 + 67.525 0.0 0.0 6.7554 6.7554 91.2 0.0 0.0 0.0 15.509074688805818 5.642492736872597 5.642492736872597 14.075221787320515 0 1.1643943297944483 1.0457574905606752 0.6549471895720984 0.0 [EP]{I|L}{M(Oxidation (M))|F}V{I|L}P[VS];[EP]{I|L}{M(Oxidation (M))|F}{I|L}VP[VS];[{M(Oxidation (M))|F}V]{I|L}PE{I|L}P[VS];[{I|L}P]E{M(Oxidation (M))|F}V{I|L}P[VS];[EP]{I|L}{I|L}{M(Oxidation (M))|F}VP[VS];[EP]{I|L}{I|L}V{M(Oxidation (M))|F}P[VS];[{M(Oxidation (M))|F}V]P{I|L}E{I|L}P[VS];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[QT]{I|L}P[VS];[{I|L}P]E{M(Oxidation (M))|F}{I|L}VP[VS];{[QD]|[EN]|[WG]|[KD]|[RS]}[WR]{I|L}P[VS] 6.7554;5.3473;5.2038;4.9307;4.8699;4.773;4.1593;4.0553;3.5226;3.5093 -;-;-;-;-;-;-;-;-;- 593 1 1.948 94297.9 1.0 14087 5687 19774 HBL1_DMSO_200M_050219_2,19776 HBL1_DMSO_200M_050219_2,19776,SITVRSIQP False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19779 107.37 50.0 1565300.0 25 0 229870.0 + 32016 RVIDYILDL 9 64 560.3240109094728 1118.6334688857455 2 560.3240234255791 MULTI CID FTMS 0 0 0 19778 891063.4375 0.8220386028506611 1 -0.046356201171875 1 Unmodified _RVIDYILDL_ ENSG00000117318|ENST00000374561|ID3 43.77239144664712 0.0547478964384323 4 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L} 9 3 + 78.394 0.0 0.0 7.0081 7.0081 95.15 0.0 0.0 0.0 25.258396522653683 64.58220305641312 25.258396522653683 78.39448436569874 0 1.3494850021680094 1.5228787452803376 0.0 1.079689690656103 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L} 7.0081 - 75 1 1.948 64924.8 1.0 14088 5689 19778 HBL1_DMSO_200M_050219_2,19779 HBL1_DMSO_200M_050219_2,19779,RVIDYILDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19780 107.38 800.0 161200.0 25 0 9892.0 -1 0 107 827.3952131853972 3305.5517468751887 4 827.8965942263603 MULTI CID FTMS 0 0 0 19778 73059.1953125 0.0389902426256743 -14 0.1015167236328125 2 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 53.166 0.0 0.0 1.6084 0.0 0.0 0.0 2264.9412566988226 2264.9412566988226 28.67899488097549 0.0 0.0 0.0 0 1.5 0.0 0.2302046884880938 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.6084 - 573 1 1.948 99493.0 0.3100000023841858 14089 5689 19778 HBL1_DMSO_200M_050219_2,19780 HBL1_DMSO_200M_050219_2,19780, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19781 107.39 800.0 362140.0 25 0 50542.0 + 14664 IIPEGGLFTVV 11 111 1144.6605567486456 1143.6532802820457 1 1144.659350574017 MULTI CID FTMS 0 0 0 19778 136505.640625 0.3812357129790734 -20 0.1399612426757812 3 Unmodified _IIPEGGLFTVV_ ENST00000563686.5_1_18:52942938-53070719:-|nuORF 92.65332237495696 0.0005679004996864 4 [EP]GG{I|L}{M(Oxidation (M))|F}TV{I|L}{I|L}V 11 4 + 82.031 0.0 0.0 7.1727 7.1727 81.27 0.0 0.0 0.0 13.917057547975176 31.911776505185017 13.917057547975176 2.798859261803983 0 0.0 0.0 2.385151878060192 0.0 [EP]GG{I|L}{M(Oxidation (M))|F}TV{I|L}{I|L}V;[EP]GG{I|L}{M(Oxidation (M))|F}T{I|L}{I|L}VV;[EP]GG{I|L}{M(Oxidation (M))|F}T{I|L}V{I|L}V;[EP]GG{I|L}{I|L}{I|L}{M(Oxidation (M))|F}TVV;[EP]GG{I|L}{M(Oxidation (M))|F}{I|L}S{I|L}{I|L}V;[EP]N{I|L}{M(Oxidation (M))|F}TV{I|L}{I|L}V;[EP]GG{I|L}{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}V;[EP]GG{I|L}{M(Oxidation (M))|F}{I|L}{I|L}TVV;[EP]G{I|L}G{M(Oxidation (M))|F}TV{I|L}{I|L}V;[EP]GG{I|L}{M(Oxidation (M))|F}{I|L}T{I|L}VV 7.1727;6.928;6.7567;6.6713;6.6263;6.5978;6.5001;6.4462;6.4338;6.3816 -;-;-;-;-;-;-;-;-;- 8566 1 1.948 176087.7 0.4600000083446502 14090 5689 19778 HBL1_DMSO_200M_050219_2,19781 HBL1_DMSO_200M_050219_2,19781,IIPEGGLFTVV True True IIPEGGLFTVV 107.39448 1144.65935057402 8423912.0 19778.0 ENST00000563686.5_1_18:52942938-53070719:-|nuORF 5.012296199798584 1.0 True 11.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19782 107.41 800.0 251870.0 25 0 17511.0 -1 0 102 1102.857378084061 3305.550304852384 3 1103.191577136517 MULTI CID FTMS 0 0 0 19778 76298.578125 0.0476434530595136 -16 0.1219863891601562 4 4 H{I|L}VEA{I|L}Y 7 -1 79.284 0.0 0.0 2.3985 0.0 0.0 0.0 2477.0912112031506 2477.0912112031506 41.83175737152787 0.0 0.0 0.0 0 2.8807196863200843 0.0 0.0 0.0 H{I|L}VEA{I|L}Y 2.3985 - 571 + 1 1.948 136736.1 0.9100000262260436 14091 5689 19778 HBL1_DMSO_200M_050219_2,19782 HBL1_DMSO_200M_050219_2,19782, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19785 107.42 569.0 229520.0 25 0 41461.0 + 19990 LILDPIFKV 9 98 529.3366026345918 1056.6586523359836 2 529.8384277224541 MULTI CID FTMS 0 0 0 19784 88888.8671875 0.2801280223673526 -17 0.1683425903320312 1 Unmodified _LILDPIFKV_ ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF 32.78568957990786 0.1150597335874693 4 {I|L}{I|L}{I|L}D[{I|L}P]{M(Oxidation (M))|F}KV 9 0 + 65.957 0.0 0.0 6.242 6.242 91.153 0.0 0.0 0.0 45.32226753704853 14.09256854528806 14.09256854528806 32.07854797738411 0 0.7134679910804405 2.0 0.0 0.1989700043360188 + + {I|L}{I|L}{I|L}D[{I|L}P]{M(Oxidation (M))|F}KV;{I|L}{I|L}[{M(Oxidation (M))|F}V]VKP{[QN]|[E{I|L}]|[KN]};{I|L}{I|L}[{M(Oxidation (M))|F}V]V[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.242;3.2062;2.8296 +;-;- + 484 + 1 1.948 104570.6 1.0 14092 5691 19784 HBL1_DMSO_200M_050219_2,19785 HBL1_DMSO_200M_050219_2,19785,LILDPIFKV True True LILDPIFKV 107.42494 529.3374 6482669.0 19784.0 ENSG00000167658|ENST00000309311|EEF2;;ENST00000598182.5_1_19:3980752-3982305:-|nuORF 5.499207337697347 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19786 107.44 650.0 112050.0 25 0 9266.6 37705 TLPGTPTFLVV 11 108 572.8337766908013 1143.6530004484025 2 572.8332397341728 MULTI CID FTMS 0 0 0 19784 103591.5703125 1.0 0 0.0 2 Unmodified _TLPGTPTFLVV_ ENST00000593525.1_1_19:41305821-41306275:+|nuORF;ENST00000593726.5_1_19:41305476-41306130:+|nuORF;ENST00000596517.1_1_19:41305794-41306505:+|nuORF 34.40172386719151 0.2986346176549658 4 [EP]GG{I|L}{M(Oxidation (M))|F}T{I|L}{I|L}VV 11 6 + 50.922 0.0 0.0 4.4526 4.4526 67.814 0.0 0.0 0.0 1.231366744738871 9.044938854093624 1.231366744738871 1.231366744738871 0 0.6989700043360187 0.0 1.274227503252014 0.0 [EP]GG{I|L}{M(Oxidation (M))|F}T{I|L}{I|L}VV;[{I|L}P]TN{M(Oxidation (M))|F}E{I|L}{I|L}VV;[{I|L}T]PN{M(Oxidation (M))|F}E{I|L}{I|L}VV;[EP]N{I|L}{M(Oxidation (M))|F}T{I|L}{I|L}VV;[EP]GG{I|L}T{M(Oxidation (M))|F}{I|L}{I|L}VV;[{I|L}P]TNE{M(Oxidation (M))|F}{I|L}{I|L}VV;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PE{I|L}{I|L}VV;[EP]GG{I|L}{M(Oxidation (M))|F}{I|L}T{I|L}VV;[{I|L}T]PNE{M(Oxidation (M))|F}{I|L}{I|L}VV;[EP]GG{I|L}{M(Oxidation (M))|F}{I|L}{I|L}TVV 4.4526;4.3449;4.1605;4.1408;3.9026;3.8295;3.6762;3.6674;3.6452;3.6216 -;-;-;-;-;-;-;-;-;- 2673 1 1.948 62265.9 1.0 14093 5691 19784 HBL1_DMSO_200M_050219_2,19786 HBL1_DMSO_200M_050219_2,19786,TLPGTPTFLVV False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19789 107.46 800.0 16176.0 25 0 1318.5 -1 0 31 1099.935839831829 0 1099.935839831829 PEAK CID FTMS 0 0 0 -1 0 1 4 S 1 -1 5.4846 0.0 0.0 0.24954 0.0 0.0 1099.3878867240649 1008.3943575494748 2107.78224427354 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.24954 - 1 + 1 1.948 19672.6 0.3799999952316284 14094 5693 19788 HBL1_DMSO_200M_050219_2,19789 HBL1_DMSO_200M_050219_2,19789, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19790 107.47 800.0 186430.0 25 0 13954.0 + 10610 FVLPELPSV 9 120 500.78868434573377 999.5628157582676 2 500.7889282107353 MULTI CID FTMS 0 0 0 19788 100864.4765625 0.1888488921347346 -29 0.250762939453125 2 Unmodified _FVLPELPSV_ ENSG00000182149|ENST00000378799|IST1;ENST00000536027.1_1_16:71958181-71961713:+|nuORF;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 77.98433622928108 0.0180125044636492 4 [EP]{I|L}{M(Oxidation (M))|F}V{I|L} 6 6 39.051 0.0 0.0 3.9068 0.0 0.0 0.0 298.1373398357112 298.1373398357112 7.038858210204268 0.0 0.0 0.0 0 0.8494850021680094 0.8538719643217619 0.2887254899964357 0.0 [EP]{I|L}{M(Oxidation (M))|F}V{I|L} 3.9068 - 1507 1 1.948 114145.0 0.3700000047683716 14095 5693 19788 HBL1_DMSO_200M_050219_2,19790 HBL1_DMSO_200M_050219_2,19790,FVLPELPSV True True FVLPELPSV 107.47056 500.788928210735 41959443.0 19788.0 ENSG00000182149|ENST00000378799|IST1;;nc|ENSG00000182149|P53990|IST1;;nc|ENSG00000182149|P53990-6|IST1;;nc|ENSG00000182149|P53990-5|IST1;;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;;ENST00000536027.1_1_16:71958181-71961713:+|nuORF;;nc|ENSG00000182149|P53990-2|IST1 6.843387285868327 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19791 107.48 800.0 42577.0 25 0 2535.7 -1 0 76 922.446296781242 3685.756081258568 4 922.9446899294852 MULTI CID FTMS 0 0 0 19788 58971.0390625 0.8805570905600548 1 -0.0440673828125 3 4 {I|L}Y{I|L} 3 -1 11.682 0.0 0.0 0.31696 0.0 0.0 2747.2313142681364 546.2728365533811 3293.5041508215177 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y{I|L} 0.31696 - 80 + 1 1.948 34367.2 0.6299999952316284 14096 5693 19788 HBL1_DMSO_200M_050219_2,19791 HBL1_DMSO_200M_050219_2,19791, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19794 107.5 211.0 304640.0 25 0 23426.0 + 18308 KVLDIMPLTL 10 90 571.8462382631831 1141.677923593166 2 571.8464843630791 MULTI CID FTMS 0 0 0 19793 200351.328125 0.1324761473434443 -28 0.2745742797851562 1 Unmodified _KVLDIMPLTL_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 65.47368725323818 0.0222277162070287 4 [{I|L}P]T{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L} 10 4 + 63.306 0.0 0.0 5.545 5.545 71.812 0.0 0.0 0.0 0.9497551323085672 10.452490459521968 0.9497551323085672 0.9497551323085672 0 1.242992819099939 1.5228787452803376 0.7742275032520141 0.0 [{I|L}P]T{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}T]{I|L}Q{I|L}MP{I|L}T{I|L};[{I|L}T]P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}P]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P{I|L}T{I|L};[{I|L}T]P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P{I|L}T{I|L};{I|L}{I|L}TQ{I|L}MP{I|L}T{I|L};[{I|L}T]{I|L}QM{I|L}P{I|L}T{I|L};[{I|L}T]{I|L}[AG]{I|L}MP{I|L}T{I|L};[{I|L}T]{I|L}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};{I|L}{I|L}TQM{I|L}P{I|L}T{I|L} 5.545;5.4618;5.4355;5.2578;5.1484;4.9189;4.8026;4.6591;4.3233;4.2597 -;-;-;-;-;-;-;-;-;- 1162 1 1.948 59634.1 1.0 14097 5695 19793 HBL1_DMSO_200M_050219_2,19794 HBL1_DMSO_200M_050219_2,19794,KVLDIMPLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19795 107.51 800.0 117980.0 25 0 13117.0 + 7900 ELPFHYMKL 9 104 589.3072672125238 1176.5999814918475 2 589.3072997927666 MULTI CID FTMS 0 0 0 19793 94762.421875 0.2493819518339794 -30 0.2948379516601562 2 Unmodified _ELPFHYMKL_ REV__ENST00000555952.5_1_14:52045760-52045832:+|nuORF 32.30548876998284 0.1201446275138228 4 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L} 9 -1 + 100.85 0.0 0.0 8.5711 8.5711 87.913 0.0 0.0 0.0 31.706962271689747 4.973246408079504 4.973246408079504 4.973246408079504 0 2.224907363720609 1.5228787452803376 0.3494850021680094 0.2742275032520141 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L};MP{I|L}E{M(Oxidation (M))|F}NW{I|L}K;MP{I|L}E{M(Oxidation (M))|F}GGWK{I|L};MP{I|L}E{M(Oxidation (M))|F}GGW{I|L}K;M{I|L}PE{M(Oxidation (M))|F}NWK{I|L};M{I|L}PE{M(Oxidation (M))|F}NW{I|L}K;M{I|L}PE{M(Oxidation (M))|F}GGWK{I|L};M{I|L}PE{M(Oxidation (M))|F}GGW{I|L}K;[{I|L}P]ME{M(Oxidation (M))|F}NW[K{I|L}];[{I|L}P]E{M(Oxidation (M))|F}NWM[K{I|L}] 8.5711;8.1484;7.7885;7.3658;7.0415;6.6188;6.2589;5.8362;4.9428;4.9039 -;-;-;-;-;-;-;-;-;- 1597 + 1 1.948 74913.0 0.3700000047683716 14098 5695 19793 HBL1_DMSO_200M_050219_2,19795 HBL1_DMSO_200M_050219_2,19795,ELPFHYMKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19796 107.52 800.0 90876.0 25 0 14135.0 + 9265 DGFHIFIV 8 75 474.2530068048096 946.4914606764193 2 474.2528564333916 MULTI CID FTMS 0 0 0 19793 95365.1796875 0.9892729659079812 -1 0.0040740966796875 3 Unmodified _FHPSTFLV_ nc|ENSG00000153214|Q96K49-2|TMEM87B;ENSG00000153214|ENST00000283206|TMEM87B 20.871210003555333 0.6025813472596342 4 {[{M(Oxidation (M))|F}H]|[RQ]}GD{I|L}{M(Oxidation (M))|F}{I|L}V 8 3 + 40.455 0.0 0.0 4.2742 4.2742 74.83 0.0 0.0 0.0 3.979400086720375 23.53174587664141 3.979400086720375 6.020599913279625 0 0.8182503180159344 0.0 0.2887254899964357 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}GD{I|L}{M(Oxidation (M))|F}{I|L}V;{[{M(Oxidation (M))|F}H]|[RQ]}G{I|L}D{M(Oxidation (M))|F}{I|L}V;{[{M(Oxidation (M))|F}H]|[RQ]}GD{M(Oxidation (M))|F}{I|L}{I|L}V 4.2742;3.6381;3.4651 -;-;- 151 1 1.948 62890.6 0.3499999940395355 14099 5695 19793 HBL1_DMSO_200M_050219_2,19796 HBL1_DMSO_200M_050219_2,19796,FHPSTFLV False False DGFHIFIV 107.52266 474.252856433392 649713.375 19793.0 nc|ENSG00000153214|Q96K49-2|TMEM87B;;ENSG00000153214|ENST00000283206|TMEM87B 6.166754563649495 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19799 107.54 800.0 189210.0 25 0 23026.0 + 25266 MVVDAVMML 9 76 1008.4909162342728 1007.4836397676728 1 1008.491076648235 MULTI CID FTMS 0 0 0 19798 91729.21875 0.5613117707126221 -8 0.16473388671875 1 Unmodified _MVVDAVMML_ ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 81.86404211737425 0.017065112157077 4 {[ET]|[MV]}ADVVMM{I|L} 9 2 + 70.283 0.0 0.0 6.9761 6.9761 84.518 0.0 0.0 0.0 7.147642715192504 34.65629404546627 7.147642715192504 5.039237471316298 0 0.6505149978319906 0.0 0.9163865622122672 0.0 {[ET]|[MV]}ADVVMM{I|L};{[ET]|[MV]}VDAVMM{I|L};{[ET]|[MV]}ADVMVM{I|L};{[ET]|[MV]}AVDVMM{I|L};{[ET]|[MV]}DAVVMM{I|L};{[ET]|[MV]}VADVMM{I|L};{[ET]|[MV]}DVAVMM{I|L};{[ET]|[MV]}VDAMVM{I|L};{[ET]|[MV]}ADVMMV{I|L};{[ET]|[MV]}AVDMVM{I|L} 6.9761;6.4759;6.3235;6.2823;6.2413;6.1076;5.9159;5.8233;5.6852;5.6297 -;+;-;-;-;-;-;-;-;- + 2160 1 1.948 103332.7 0.3799999952316284 14100 5697 19798 HBL1_DMSO_200M_050219_2,19799 HBL1_DMSO_200M_050219_2,19799,MVVDAVMML True True MVVDAVMML 107.54313 1008.49107664823 1521550.625 19798.0 nc|ENSG00000135624|Q99832-4|CCT7;;ENSG00000135624|ENST00000258091|CCT7;;nc|ENSG00000135624|Q99832-3|CCT7 6.903520425160726 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19800 107.55 538.0 132730.0 25 0 20030.0 + 24422 MGEIDESSLL 10 85 547.2576561284195 1092.500759323639 2 547.2579833865166 MULTI CID FTMS 0 0 0 19798 107064.0703125 0.867895390247327 -9 0.1688079833984375 2 Unmodified _MGEIDESSLL_ REV__ENSG00000164024|ENST00000296411|METAP1 10.073929032068715 0.6785112666868882 4 {[DA]|[EG]}M 3 -1 30.062 0.0 0.0 2.7516 0.0 0.0 0.0 772.3729571598295 772.3729571598295 9.426806100157563 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[DA]|[EG]}M 2.7516 - 72 1 1.948 58089.3 1.0 14101 5697 19798 HBL1_DMSO_200M_050219_2,19800 HBL1_DMSO_200M_050219_2,19800,MGEIDESSLL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19809 107.6 800.0 116220.0 25 0 18744.0 + -1 SVLEALSGVAL 11 84 1058.6096418660763 0 1058.605395495892 PEAK CID FTMS 0 0 0 19808 73284.890625 0.7488120583086469 1 -0.0164108276367187 1 ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1;ENSG00000183486|ENST00000330714|MX2;nc|ENSG00000183486|P20592-2|MX2 4 {I|L}AVGS{I|L}EK 8 -1 54.093 0.0 0.0 2.5573 0.0 0.0 1075.6015336327405 239.1052340143188 1314.706767647059 0.0 0.0 0.0 0.0 0 0.0 0.0 2.774227503252014 0.0 {I|L}AVGS{I|L}EK 2.5573 - 1917 + 1 1.948 67271.6 0.4000000059604645 14102 5705 19808 HBL1_DMSO_200M_050219_2,19809 HBL1_DMSO_200M_050219_2,19809, False False SVLEALSGVAL 107.59711 1058.60539549589 784178.375 19808.0 ENSG00000157601|ENST00000398598|MX1;;nc|ENSG00000157601|P20591-2|MX1;;ENSG00000183486|ENST00000330714|MX2;;nc|ENSG00000183486|P20592-2|MX2 4.572831312815349 1.0 False 11.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19815 107.62 266.0 344800.0 25 0 54561.0 + 32017 RVIDYILDL 9 71 560.3240109094728 1118.6334688857455 2 560.3240234255791 MULTI CID FTMS 0 0 0 19814 203862.34375 0.1880704663410804 22 -0.2047576904296875 1 Unmodified _RVIDYILDL_ ENSG00000117318|ENST00000374561|ID3 34.93206674587334 0.1032771302489716 4 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L} 9 3 + 70.652 0.0 0.0 6.3159 6.3159 91.391 0.0 0.0 0.0 14.946049681132934 40.90288749933073 14.946049681132934 30.907431454711933 0 1.305462187404089 1.5228787452803376 0.0 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}[RV]Y{I|L}{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RV]{I|L}D{I|L}Y{I|L} 6.3159;3.553 -;- 100 1 1.948 73735.9 1.0 14103 5710 19814 HBL1_DMSO_200M_050219_2,19815 HBL1_DMSO_200M_050219_2,19815,RVIDYILDL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19816 107.63 800.0 142490.0 25 0 19898.0 + 32051 RVLDLVLQL 9 84 534.842527243847 1067.670501554494 2 534.8420287966728 MULTI CID FTMS 0 0 0 19814 94506.5 0.7605281358767109 -9 0.0485687255859375 2 Unmodified _RVLDLVLQL_ ENSG00000099821|ENST00000588649|POLRMT;ENST00000578759.1_1_17:60214444-60217453:-|nuORF 49.55428908609986 0.0413471690215031 4 [{I|L}V]RD{I|L}V{I|L}Q{I|L} 9 2 + 75.901 0.0 0.0 7.109 7.109 89.759 0.0 0.0 0.0 16.61159286695316 60.56205278379952 16.61159286695316 9.208187539523747 0 1.079689690656103 1.3979400086720375 0.0 0.7302046884880937 [{I|L}V]RD{I|L}V{I|L}Q{I|L};[{I|L}V]RD{I|L}V{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[Q{I|L}]V{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[Q{I|L}]V{I|L}[AG]{I|L} 7.109;6.2466;5.243;4.3806 -;-;-;- 120 1 1.948 93860.7 0.7599999904632568 14104 5710 19814 HBL1_DMSO_200M_050219_2,19816 HBL1_DMSO_200M_050219_2,19816,RVLDLVLQL True True RVLDLVLQL 107.63449 534.842028796673 770759.9375 19814.0 ENSG00000099821|ENST00000588649|POLRMT;;ENST00000578759.1_1_17:60214444-60217453:-|nuORF 5.103099822998047 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19818 107.64 38.0 2880900.0 25 0 172650.0 -1 0 86 827.3952131853972 3305.5517468751887 4 827.8970825076103 MULTI CID FTMS 0 0 0 19817 1782426.0 0.9512453826660152 8 -0.045654296875 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 59.333 0.0 0.0 1.7949 0.0 0.0 0.0 2264.938103582284 2264.938103582284 35.0 0.0 0.0 0.0 0 1.924742501084005 0.0 0.3252574989159953 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.7949 - 592 1 1.948 86022.9 1.0 14105 5711 19817 HBL1_DMSO_200M_050219_2,19818 HBL1_DMSO_200M_050219_2,19818, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19821 107.65 98.0 2298000.0 25 0 168670.0 -1 0 103 1102.857378084061 3305.550304852384 3 1103.192675769329 MULTI CID FTMS 0 0 0 19820 1329343.875 0.8300879788972412 8 -0.0664901733398437 1 4 H{I|L}VEA{I|L}Y{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]}T 12 -1 125.44 0.0 0.0 3.7949 0.0 0.0 0.0 1920.7302950494752 1920.7302950494752 74.4825221775622 0.0 0.0 0.0 0 3.774227503252014 0.0 0.4247425010840047 1.610924374808178 H{I|L}VEA{I|L}Y{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]}T 3.7949 - 2261 + 1 1.948 150673.4 1.0 14106 5713 19820 HBL1_DMSO_200M_050219_2,19821 HBL1_DMSO_200M_050219_2,19821, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19827 107.67 160.0 540230.0 25 0 92413.0 + 19991 LILDPIFKV 9 71 529.3366026345918 1056.6586523359836 2 529.3365966677666 MULTI CID FTMS 0 0 0 19826 322106.90625 0.7022468323707102 14 -0.1537551879882812 1 Unmodified _LILDPIFKV_ ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF 38.17557092003332 0.0854718145212029 4 {I|L}{I|L}{I|L}DP{I|L}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 76.164 0.0 0.0 7.208 7.208 95.638 0.0 0.0 0.0 42.97614693140829 4.137342758552691 4.137342758552691 76.16373455765242 0 0.7302046884880937 2.0 0.4247425010840047 0.0 + + {I|L}{I|L}{I|L}DP{I|L}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]} 7.208 + + 308 + 1 1.948 73692.4 1.0 14107 5718 19826 HBL1_DMSO_200M_050219_2,19827 HBL1_DMSO_200M_050219_2,19827,LILDPIFKV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19828 107.68 585.0 191490.0 25 0 11789.0 + 33672 SIVSELAGL 9 105 888.5068158462607 887.4995393796606 1 888.5046874880791 MULTI CID FTMS 0 0 0 19826 136546.40625 0.6873100531650583 17 -0.1781158447265625 2 Unmodified _SIVSELAGL_ ENSG00000168610|ENST00000264657|STAT3;nc|ENSG00000168610|P40763-2|STAT3;nc|ENSG00000168610|P40763-3|STAT3 120.45040980043947 0.0013734672977787 4 {[TV]|[{I|L}S]}VSE{I|L}AG{I|L} 9 0 + 92.206 0.0 0.0 10.389 10.389 84.119 0.0 0.0 0.0 20.440228147639203 14.973024840566469 14.973024840566469 1.9693254233184376 0 1.8550083952587293 1.3979400086720375 2.555462187404089 0.0 + + {[TV]|[{I|L}S]}VSE{I|L}AG{I|L};{[TV]|[{I|L}S]}VES{I|L}AG{I|L};{[TV]|[{I|L}S]}EVS{I|L}AG{I|L};{[TV]|[{I|L}S]}D{I|L}S{I|L}AG{I|L};{[TV]|[{I|L}S]}VSEA{I|L}G{I|L};{[TV]|[{I|L}S]}VSE{I|L}Q{I|L};{[TV]|[{I|L}S]}VESA{I|L}G{I|L};{[TV]|[{I|L}S]}EVSA{I|L}G{I|L};{[TV]|[{I|L}S]}VES{I|L}Q{I|L};{[TV]|[{I|L}S]}EVS{I|L}Q{I|L} 10.389;10.168;10.144;9.569;9.1252;9.0911;8.9033;8.8795;8.8692;8.8454 +;-;-;-;-;-;-;-;-;- + 3288 1 1.948 78048.6 1.0 14108 5718 19826 HBL1_DMSO_200M_050219_2,19828 HBL1_DMSO_200M_050219_2,19828,SIVSELAGL True True SIVSELAGL 107.68015 888.504687488079 1305684.375 19826.0 ENSG00000168610|ENST00000264657|STAT3;;nc|ENSG00000168610|P40763-2|STAT3;;nc|ENSG00000168610|P40763-3|STAT3 5.974204699198405 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19830 107.7 800.0 171470.0 25 0 17666.0 + 26661 NYIDRFLSSM 10 108 623.2999107006698 1244.5852684681397 2 623.3002197146416 MULTI CID FTMS 0 0 0 19829 96772.78125 0.0519524489309877 -40 0.389923095703125 1 Unmodified _NYIDRFLSSM_ ENSG00000145386|ENST00000274026|CCNA2 143.21322497773306 0.00010449669748 4 [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM 10 0 + 101.45 0.0 0.0 8.1513 8.1513 96.943 0.0 0.0 0.0 21.210105797346685 87.40926274548464 21.210105797346685 37.347042665658606 0 2.742992819099939 2.0 0.805462187404089 1.4361818737241734 + + [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM;{[CT]|[{M(Oxidation (M))|F}G]}[VS]DR{M(Oxidation (M))|F}{I|L}SSM;[AG][YV]DR{M(Oxidation (M))|F}{I|L}SSM;[QP]{M(Oxidation (M))|F}AA[QP]D{I|L}QM;[YN]{I|L}DR{M(Oxidation (M))|F}AA[{M(Oxidation (M))|F}E];[AG]P{M(Oxidation (M))|F}AA[QP]D{I|L}QM;GG[EP]{I|L}[C(Carbamidomethyl (C))Q]{I|L}{I|L}QM;[QP]{M(Oxidation (M))|F}AA[QP]EVQM;[QP]{M(Oxidation (M))|F}AA{M(Oxidation (M))|F}{M(Oxidation (M))|F}RMM;GG[EP]{I|L}[C(Carbamidomethyl (C))Q]{I|L}{I|L}MQ 8.1513;5.1506;4.6396;3.7362;3.2454;3.1174;2.9335;2.41;2.3101;1.8255 +;-;-;-;-;-;-;-;-;- + 1493 1 1.948 106241.2 0.3400000035762787 14109 5719 19829 HBL1_DMSO_200M_050219_2,19830 HBL1_DMSO_200M_050219_2,19830,NYIDRFLSSM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19831 107.71 455.0 191920.0 25 0 28158.0 + 24589 MLIEVIEKL 9 83 544.3253347681622 1086.6361166031245 2 544.3253051638603 MULTI CID FTMS 0 0 0 19829 128374.4296875 0.6931723736509297 -4 0.0279159545898437 2 Unmodified _MLIEVIEKL_ ENSG00000132842|ENST00000255194|AP3B1;nc|ENSG00000132842|O00203-3|AP3B1 70.33199760932243 0.0209706178985989 4 M{I|L}{I|L}EV{I|L}EK{I|L} 9 0 + 105.72 0.0 0.0 9.7292 9.7292 97.045 0.0 0.0 0.0 39.37296470060352 11.962724883926654 11.962724883926654 17.363467363607782 0 1.4731975075880328 2.0 1.2302046884880935 0.2134679910804404 + + M{I|L}{I|L}EV{I|L}EK{I|L};M{I|L}{I|L}EV{I|L}{[VA]|[{I|L}G]}S{I|L} 9.7292;8.1313 +;- + 420 + 1 1.948 72924.3 1.0 14110 5719 19829 HBL1_DMSO_200M_050219_2,19831 HBL1_DMSO_200M_050219_2,19831,MLIEVIEKL True True MLIEVIEKL 107.70594 544.32530516386 1303198.5 19829.0 ENSG00000132842|ENST00000255194|AP3B1;;nc|ENSG00000132842|O00203-3|AP3B1 5.154477119445801 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19834 107.71 101.0 705070.0 25 0 51485.0 + 10611 FVLPELPSV 9 76 500.78868434573377 999.5628157582676 2 500.7881042361259 MULTI CID FTMS 0 0 0 19833 437285.25 0.8187306158099162 -1 0.0038909912109375 1 Unmodified _FVLPELPSV_ ENSG00000182149|ENST00000378799|IST1;ENST00000536027.1_1_16:71958181-71961713:+|nuORF;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 42.09456458481378 0.0639583784996157 4 [EP]{I|L}{M(Oxidation (M))|F}V{I|L}PSV 9 4 [EP]{I|L}{M(Oxidation (M))|F}V + + 34.539 21.884 3.7389 3.4554 3.4554 47.063 0.0 0.0 0.0 0.0 3.363109537310862 0.0 0.0 0 1.0 0.0 0.5866968715561641 0.0 [EP]{I|L}{M(Oxidation (M))|F}V{I|L}PSV 3.4554 - 558 + 1 1.948 65524.7 1.0 14111 5721 19833 HBL1_DMSO_200M_050219_2,19834 HBL1_DMSO_200M_050219_2,19834,FVLPELPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19835 107.73 800.0 46155.0 25 0 3849.9 -1 0 71 1173.2108107247673 3516.610602774502 3 1174.880664050579 MULTI CID FTMS 0 0 0 19833 13960.1162109375 0.2272147108246141 -3 0.045654296875 2 4 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.19876 0.0 0.0 2027.8941243582897 1338.6222628229127 3366.5163871812024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19876 - 12 + 1 1.948 31187.1 0.3799999952316284 14112 5721 19833 HBL1_DMSO_200M_050219_2,19835 HBL1_DMSO_200M_050219_2,19835, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19839 107.75 800.0 121490.0 25 0 27241.0 + 9129 FFPLHPMMI 9 75 566.7876060000251 1131.56065906685 2 566.7875854372978 MULTI CID FTMS 0 0 0 19838 86260.4765625 0.8895151707963811 1 -0.03021240234375 1 Unmodified _FFPLHPMMI_ ENSG00000182180|ENST00000372945|MRPS16;ENST00000471251.5_1_10:75010612-75012041:-|nuORF;ENST00000473427.1_1_10:75010612-75012314:-|nuORF 28.17323086031832 0.1727213568982648 4 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}PMM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 9 5 + 29.843 0.0 0.0 2.6373 2.6373 68.607 0.0 0.0 0.0 4.137342758552695 11.70941280735775 4.137342758552695 4.407365922476814 0 0.0 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}PMM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{I|L}P]H{NN|[MP]|[D{I|L}]|[EV]}M{I|L};[YV]{NN|[MP]|[D{I|L}]|[EV]}H[{I|L}P][{M(Oxidation (M))|F}E];{NN|[MP]|[D{I|L}]|[EV]}H[{I|L}P]M{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{NN|[MP]|[D{I|L}]|[EV]}[YV]H[{I|L}P][{M(Oxidation (M))|F}E];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{M(Oxidation (M))|F}DP{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M[{I|L}P]M{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{NN|[MP]|[D{I|L}]|[EV]}M[H{I|L}]P{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{NN|[MP]|[D{I|L}]|[EV]}H[YV][{I|L}P][{M(Oxidation (M))|F}E];{NN|[MP]|[D{I|L}]|[EV]}H[{I|L}P][YV][{M(Oxidation (M))|F}E] 2.6373;2.2478;1.4745;1.3415;1.3189;1.284;1.2311;1.0907;1.0377;0.92832 -;+;-;-;-;-;-;-;-;- + 183 1 1.948 79178.1 0.3799999952316284 14113 5724 19838 HBL1_DMSO_200M_050219_2,19839 HBL1_DMSO_200M_050219_2,19839,FFPLHPMMI False True FFPLHPMMI 107.75277 566.787585437298 1072882.625 19838.0 ENST00000473427.1_1_10:75010612-75012314:-|nuORF;;ENSG00000182180|ENST00000372945|MRPS16;;ENST00000471251.5_1_10:75010612-75012041:-|nuORF 5.4090309937795 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19840 107.77 800.0 123690.0 25 0 16883.0 + 10697 FVVPDALYV 9 97 511.7800239295635 1021.5454949259272 2 511.7802001833916 MULTI CID FTMS 0 0 0 19838 90127.90625 1.0 0 0.0 2 Unmodified _FVVPDALYV_ REV__ENSG00000150471|ENST00000683033|ADGRL3;REV__nc|ENSG00000150471|Q9HAR2-2|ADGRL3;REV__nc|ENSG00000150471|Q9HAR2-4|ADGRL3;REV__nc|ENSG00000150471|Q9HAR2|ADGRL3 23.1484247019978 0.2366544122328345 4 P{I|L}EP{I|L}VE 7 -1 50.785 0.0 0.0 4.9714 0.0 0.0 226.0949421613297 0.0 226.0949421613297 0.0 37.14028913221785 0.0 0.0 0 0.4247425010840047 0.0 0.6307196863200843 0.0 P{I|L}EP{I|L}VE 4.9714 - 447 1 1.948 83915.4 0.3700000047683716 14114 5724 19838 HBL1_DMSO_200M_050219_2,19840 HBL1_DMSO_200M_050219_2,19840,FVVPDALYV False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19842 107.77 31.0 1475000.0 25 0 133230.0 + 18309 KVLDIMPLTL 10 68 571.8462382631831 1141.677923593166 2 571.8464843630791 MULTI CID FTMS 0 0 0 19841 1334931.375 0.8826822721012935 2 -0.01190185546875 1 Unmodified _KVLDIMPLTL_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 51.41523569358685 0.0718446036348414 4 [{I|L}P]T{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L} 10 4 + 68.83 0.0 0.0 6.0288 6.0288 80.594 0.0 0.0 0.0 8.239087409443187 10.452490459521968 8.239087409443187 4.771212547196626 0 1.242992819099939 2.0 0.8494850021680094 0.0 [{I|L}P]T{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}P]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P{I|L}T{I|L};[{I|L}T]P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}T][Q{I|L}]{I|L}MP{I|L}T{I|L};[{I|L}T]P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P{I|L}T{I|L};[{I|L}T][Q{I|L}]M{I|L}P{I|L}T{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}[YV]P{I|L}T{I|L} 6.0288;5.6109;5.3071;4.9776;4.8892;4.2748;3.2938 -;-;-;-;-;-;- 459 1 1.948 40982.3 1.0 14115 5725 19841 HBL1_DMSO_200M_050219_2,19842 HBL1_DMSO_200M_050219_2,19842,KVLDIMPLTL True True KVLDIMPLTL 107.77148 571.846484363079 36767307.0 19841.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 6.187220255533855 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19843 107.77 160.0 352160.0 25 0 41499.0 -1 MPLERMKGIS 10 83 589.3072672125238 1176.5999814918475 2 589.3074828982353 MULTI CID FTMS 0 0 0 19841 379989.09375 1.0 0 0.0 2 Oxidation (M) _MPLERM(Oxidation (M))KGIS_ ENSG00000174292|ENST00000688331|TNK1;nc|ENSG00000174292|Q13470|TNK1 24.99096001346401 0.4071966087057876 4 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L} 9 -1 + 91.58 0.0 0.0 7.7835 7.7835 91.451 0.0 0.0 0.0 28.58485038569384 12.98564692360155 12.98564692360155 9.208187539523747 0 1.8169015600442573 1.3979400086720375 0.3494850021680094 0.2742275032520141 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L};MP{I|L}E{M(Oxidation (M))|F}GGWK{I|L};M{I|L}PE{M(Oxidation (M))|F}NWK{I|L};M{I|L}PE{M(Oxidation (M))|F}GGWK{I|L};[{I|L}P]E{M(Oxidation (M))|F}NWMK{I|L};[{I|L}P]E{M(Oxidation (M))|F}NMWK{I|L};[{I|L}P]E{M(Oxidation (M))|F}GGMWK{I|L};[{I|L}P]M{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WMK{I|L};MP{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}W{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}P]E{M(Oxidation (M))|F}GGWMK{I|L} 7.7835;7.0008;6.3866;5.604;5.3324;5.1827;4.1237;4.014;3.9451;3.9123 -;-;-;-;-;-;-;-;-;- 668 + 1 1.948 47302.0 1.0 14116 5725 19841 HBL1_DMSO_200M_050219_2,19843 HBL1_DMSO_200M_050219_2,19843,MPLERMKGIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19847 107.8 800.0 140870.0 25 0 5713.4 + 23319 LTALALML 8 89 845.5163329313693 844.5090564647693 1 847.5207397341728 MULTI CID FTMS 0 0 0 19846 88414.375 0.440078799375018 -31 0.2558364868164062 1 Unmodified _LTALALML_ ENSG00000141349|ENST00000269097|G6PC3 49.66892048692302 0.1408045912742846 4 [{I|L}A]TA{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 8 2 + 46.164 0.0 0.0 5.4663 5.4663 77.753 0.0 0.0 0.0 6.989700043360188 23.945247061488857 6.989700043360188 4.330984399557423 0 0.3494850021680094 0.0 1.805462187404089 0.0 [{I|L}A]TA{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A]T{I|L}A{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A]AT{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A]{I|L}TA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A]{I|L}AT{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A]A{I|L}T{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A][VP]A{I|L}[YV];[{I|L}A][VP]{I|L}A[YV];[{I|L}A][PG]{I|L}{I|L}[YV];[{I|L}A]{I|L}[PG]{I|L}[YV] 5.4663;4.9535;4.4031;4.005;3.1456;3.0308;1.6158;1.4072;1.4072;1.2593 -;-;-;-;-;-;-;-;-;- 772 1 1.948 80305.6 0.7799999713897705 14117 5728 19846 HBL1_DMSO_200M_050219_2,19847 HBL1_DMSO_200M_050219_2,19847,LTALALML False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19851 107.82 471.0 169340.0 25 0 13138.0 + 31057 RLIESLFTI 9 94 546.3267471903026 1090.6389414474052 2 546.3271972537041 MULTI CID FTMS 0 0 0 19850 94520.1484375 0.3159735777455766 -31 0.2464981079101562 1 Unmodified _RLIESLFTI_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 36.506200033944 0.094635877243972 4 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L} 9 2 + 56.488 0.0 0.0 5.1794 5.1794 76.837 0.0 0.0 0.0 4.68765315847925 12.98332479720628 4.68765315847925 4.68765315847925 0 0.8807196863200843 1.3979400086720375 0.8807196863200843 0.0 {[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L};[{I|L}T]{M(Oxidation (M))|F}[PS][KG]KT{I|L};[{M(Oxidation (M))|F}T]{I|L}[PS][KG]KT{I|L} 5.1794;4.7496;3.3702 -;-;- 186 1 1.948 68744.1 1.0 14118 5731 19850 HBL1_DMSO_200M_050219_2,19851 HBL1_DMSO_200M_050219_2,19851,RLIESLFTI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19854 107.84 800.0 93011.0 25 0 6328.8 -1 0 63 1069.1770075691118 3204.5091933075355 3 1069.516406238079 MULTI CID FTMS 0 0 0 19853 73405.6015625 0.7954587842292214 -1 0.0038909912109375 1 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 67.115 0.0 0.0 2.0944 0.0 0.0 0.0 2262.9601570128666 2262.9601570128666 60.12578788640525 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 2.0944 - 53 1 1.948 52601.9 0.3499999940395355 14119 5733 19853 HBL1_DMSO_200M_050219_2,19854 HBL1_DMSO_200M_050219_2,19854, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19859 107.86 606.0 106830.0 25 0 6866.4 -1 0 74 802.1333514708648 3204.504300017059 4 802.6359130740166 MULTI CID FTMS 0 0 0 19858 65374.3828125 0.7463024768949956 -24 0.20709228515625 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 57.317 0.0 0.0 1.7886 0.0 0.0 0.0 2163.8847681169214 2163.8847681169214 39.12971259689115 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.7886 - 132 1 1.948 53357.6 1.0 14120 5737 19858 HBL1_DMSO_200M_050219_2,19859 HBL1_DMSO_200M_050219_2,19859, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19863 107.89 800.0 107210.0 25 0 16129.0 + 3922 DALHNLFYI 9 98 553.2878775349543 1104.5612021367083 2 553.2881347537041 MULTI CID FTMS 0 0 0 19862 93037.4140625 0.4806250084249095 -35 0.2910232543945312 1 Unmodified _DALHNLFYI_ ENSG00000122512|ENST00000265849|PMS2;nc|ENSG00000122512|P54278-3|PMS2 36.12702656103203 0.0967173616627612 4 {M(Oxidation (M))|F}{I|L}N{[MS]|[{M(Oxidation (M))|F}A]}S{I|L} 7 5 51.501 0.0 0.0 4.6626 0.0 0.0 294.15847598245585 0.0 294.15847598245585 0.0 23.5425788214684 0.0 0.0 0 0.5 0.0 0.6421590589602533 1.0114393726401687 {M(Oxidation (M))|F}{I|L}N{[MS]|[{M(Oxidation (M))|F}A]}S{I|L} 4.6626 - 484 + 1 1.948 67530.1 0.3499999940395355 14121 5740 19862 HBL1_DMSO_200M_050219_2,19863 HBL1_DMSO_200M_050219_2,19863,DALHNLFYI True True DALHNLFYI 107.88809 553.288134753704 3140550.75 19862.0 nc|ENSG00000122512|P54278-3|PMS2;;ENSG00000122512|ENST00000265849|PMS2 4.546054045359294 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19866 107.9 138.0 859270.0 25 0 60206.0 -1 0 91 827.3952131853972 3305.5517468751887 4 827.8973266482353 MULTI CID FTMS 0 0 0 19865 506625.46875 0.270375958322782 39 -0.332733154296875 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 64.275 0.0 0.0 1.9445 0.0 0.0 0.0 2264.9401788267 2264.9401788267 41.15234039764886 0.0 0.0 0.0 0 1.5 0.0 0.6421590589602533 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9445 - 623 1 1.948 92151.5 1.0 14122 5742 19865 HBL1_DMSO_200M_050219_2,19866 HBL1_DMSO_200M_050219_2,19866, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19868 107.91 407.0 631510.0 25 0 39950.0 -1 0 118 1102.857378084061 3305.550304852384 3 1103.525805652142 MULTI CID FTMS 0 0 0 19867 450678.15625 0.2895895983331887 36 -0.3194427490234375 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 67.853 0.0 0.0 2.0527 0.0 0.0 0.0 2264.9386764511105 2264.9386764511105 24.604093769761874 0.0 0.0 0.0 0 2.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.0527 - 1968 1 1.948 169254.2 1.0 14123 5743 19867 HBL1_DMSO_200M_050219_2,19868 HBL1_DMSO_200M_050219_2,19868, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19871 107.93 800.0 126450.0 25 0 17793.0 -1 VFSEMSPLL 9 99 519.7624066412048 1037.5102603492096 2 519.7619506716728 MULTI CID FTMS 0 0 0 19870 74080.328125 0.7375721964242113 1 -0.0163726806640625 1 Oxidation (M) _VFSEM(Oxidation (M))SPLL_ ENST00000350082.9_1_6:52867840-52868008:-|nuORF 21.74664581756881 0.2544899275067181 4 [Y{I|L}]{I|L}EC(Carbamidomethyl (C)){I|L}EV 8 -1 + 40.003 0.0 0.0 3.8557 3.8557 74.493 0.0 0.0 0.0 14.786465885450966 13.399480616943508 13.399480616943508 7.074484699911558 0 0.7429928190999391 2.0 0.0 0.0 [Y{I|L}]{I|L}EC(Carbamidomethyl (C)){I|L}EV;[Y{I|L}]{I|L}EGC{I|L}EV;[Y{I|L}]W{[ES]|[DT]|[{I|L}C]}{I|L}EV;[Y{I|L}]WHHPSV;[Y{I|L}]{[DA]|[EG]}{[ES]|[DT]|[{I|L}C]}{I|L}EV;{[DS]|[MA]|[CV]|TT}WM[K{I|L}]C(Carbamidomethyl (C))V;V{M(Oxidation (M))|F}{I|L}{[ES]|[DT]|[{I|L}C]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS];VN[KS]{M(Oxidation (M))|F}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PS];{[DS]|[MA]|[CV]|TT}WM[K{I|L}][CG]V 3.8557;3.1738;3.0928;2.542;2.2001;1.0421;0.68181;0.46538;0.1494 -;-;-;-;-;-;-;-;- 354 1 1.948 83918.5 0.8899999856948853 14124 5745 19870 HBL1_DMSO_200M_050219_2,19871 HBL1_DMSO_200M_050219_2,19871,VFSEMSPLL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19874 107.94 30.0 2132200.0 25 0 256010.0 + 26662 NYIDRFLSSM 10 75 623.2999107006698 1244.5852684681397 2 623.3004028201103 MULTI CID FTMS 0 0 0 19873 1683143.625 0.9035953301314268 -12 0.08953857421875 1 Unmodified _NYIDRFLSSM_ ENSG00000145386|ENST00000274026|CCNA2 79.42699986076722 0.0175374121712975 4 [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM 10 0 + 72.853 0.0 0.0 5.8536 5.8536 88.162 0.0 0.0 0.0 12.230998004688104 25.435595997417977 12.230998004688104 16.249387366083 0 2.636500636031869 2.0 0.3807196863200844 0.3807196863200844 + + [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM;{[HG]|PP}E{I|L}{M(Oxidation (M))|F}RD{I|L}QM;{[HG]|PP}E{I|L}{M(Oxidation (M))|F}RD{I|L}[AG]M;{[HG]|PP}E{I|L}{M(Oxidation (M))|F}RD{I|L}MQ;{[CT]|[{M(Oxidation (M))|F}G]}[VS]DR{M(Oxidation (M))|F}{I|L}SSM;{[HG]|PP}E{I|L}{M(Oxidation (M))|F}RD[VS]W;[YC(Carbamidomethyl (C))]{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[HK][KC] 5.8536;4.548;3.8117;3.7113;2.7252;2.4982;2.303 +;-;-;-;-;-;- + 235 1 1.948 55855.4 1.0 14125 5747 19873 HBL1_DMSO_200M_050219_2,19874 HBL1_DMSO_200M_050219_2,19874,NYIDRFLSSM True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19883 107.97 146.0 356960.0 25 0 26003.0 + 10612 FVLPELPSV 9 66 500.78868434573377 999.5628157582676 2 500.7874633669853 MULTI CID FTMS 0 0 0 19882 202222.1875 0.3786212686165457 33 -0.34039306640625 1 Unmodified _FVLPELPSV_ ENSG00000182149|ENST00000378799|IST1;ENST00000536027.1_1_16:71958181-71961713:+|nuORF;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990-5|IST1;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990|IST1 44.40701690623563 0.0526327925666318 4 [PS]{I|L}N{I|L}{I|L} 6 7 32.347 0.0 0.0 3.2361 0.0 0.0 0.0 359.1594279772183 359.1594279772183 7.840730643537061 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.4749073637206092 0.3494850021680094 [PS]{I|L}N{I|L}{I|L} 3.2361 - 292 1 1.948 47000.9 1.0 14126 5755 19882 HBL1_DMSO_200M_050219_2,19883 HBL1_DMSO_200M_050219_2,19883,FVLPELPSV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19892 108.01 800.0 14040.0 25 0 2075.2 -1 0 25 1137.644091784954 0 1137.644091784954 PEAK CID FTMS 0 0 0 -1 0 1 4 C 1 -1 6.9897 0.0 0.0 0.30747 0.0 0.0 955.9468006579958 1211.3023165338502 2167.249117191846 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.30747 - 2 + 1 1.948 16781.0 0.3000000119209289 14127 5763 19891 HBL1_DMSO_200M_050219_2,19892 HBL1_DMSO_200M_050219_2,19892, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19893 108.02 215.0 558370.0 25 0 48103.0 + 3212 AWIDGVLDM 9 80 1019.4858820374882 1018.478605570888 1 1019.486376941204 MULTI CID FTMS 0 0 0 19891 351562.90625 0.5083359314917586 29 -0.3228912353515625 2 Unmodified _AWIDGVLDM_ ENSG00000165934|ENST00000298875|CPSF2 107.99703571036002 0.0067560930197464 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DGV{I|L}DM 9 0 + 83.64 0.0 0.0 8.2123 8.2123 86.106 0.0 0.0 0.0 16.817496819840656 16.478174818886373 16.478174818886373 4.103480558794189 0 2.146591250700361 1.2218487496163564 0.9143943297944483 0.0 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DGV{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DR{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}EAA{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}RD{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RD]{I|L}{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DG]V{I|L}{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VG]D{I|L}{I|L}DM;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}DGVD{I|L}M;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DG]{I|L}V{I|L}DM;[W{I|L}]ADGV{I|L}DM 8.2123;7.8094;7.5474;7.3798;7.1657;7.1155;6.9151;6.7633;6.563;6.5611 +;-;-;-;-;-;-;-;-;- + 2653 1 1.948 82083.5 1.0 14128 5763 19891 HBL1_DMSO_200M_050219_2,19893 HBL1_DMSO_200M_050219_2,19893,AWIDGVLDM True True AWIDGVLDM 108.01882 1019.4863769412 5675063.0 19891.0 ENSG00000165934|ENST00000298875|CPSF2 7.711769898732503 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19896 108.03 156.0 328660.0 25 0 26286.0 + 18310 KVLDIMPLTL 10 88 571.8462382631831 1141.677923593166 2 571.8464843630791 MULTI CID FTMS 0 0 0 19895 305124.3125 0.2017540575303693 42 -0.4570236206054687 1 Unmodified _KVLDIMPLTL_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 59.36838082759317 0.0382430275470746 4 [{I|L}T]{I|L}Q{I|L}MP{I|L}T{I|L} 10 3 + 72.541 0.0 0.0 6.3539 6.3539 84.949 0.0 0.0 0.0 7.7815125038364386 10.452490459521968 7.7815125038364386 7.7815125038364386 0 1.6677353201839438 1.3010299956639813 0.6989700043360187 0.0 [{I|L}T]{I|L}Q{I|L}MP{I|L}T{I|L};{I|L}{I|L}TQ{I|L}MP{I|L}T{I|L};[{I|L}T]{I|L}[AG]{I|L}MP{I|L}T{I|L};[{I|L}P]T{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}T]P{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}T{I|L};[{I|L}T]{I|L}QM{I|L}P{I|L}T{I|L};[{I|L}P]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P{I|L}T{I|L};[{I|L}T]P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P{I|L}T{I|L};{I|L}{I|L}T[AG]{I|L}MP{I|L}T{I|L};{I|L}{I|L}TQM{I|L}P{I|L}T{I|L} 6.3539;5.6723;5.5512;5.545;5.5049;5.4757;5.0389;4.9988;4.8696;4.7941 -;-;-;-;-;-;-;-;-;- 778 1 1.948 46460.9 1.0 14129 5765 19895 HBL1_DMSO_200M_050219_2,19896 HBL1_DMSO_200M_050219_2,19896,KVLDIMPLTL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19897 108.03 241.0 278670.0 25 0 28840.0 -1 MPLERMKGIS 10 101 589.3072672125238 1176.5999814918475 2 589.3074828982353 MULTI CID FTMS 0 0 0 19895 225487.53125 0.5934052712532621 40 -0.4488906860351562 2 Oxidation (M) _MPLERM(Oxidation (M))KGIS_ ENSG00000174292|ENST00000688331|TNK1;nc|ENSG00000174292|Q13470|TNK1 29.84058131909904 0.2982332456971691 4 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L} 9 -1 + 87.431 0.0 0.0 7.4308 7.4308 90.584 0.0 0.0 0.0 15.553682814433811 10.084406814122218 10.084406814122218 9.208187539523747 0 1.5994850021680094 1.3979400086720375 0.3807196863200844 0.2614393726401688 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L};MP{I|L}E{M(Oxidation (M))|F}GGWK{I|L};M{I|L}PE{M(Oxidation (M))|F}NWK{I|L};M{I|L}PE{M(Oxidation (M))|F}GGWK{I|L};[YV]KWP{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}M{[SA]|[TG]}[R{I|L}];[YV]K{[DA]|[EG]}P{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]};[YV]KPW{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[SA]|[TG]}M[R{I|L}];[YV]PKW{I|L}E{[QD]|[EN]|[WG]|[KD]|[RS]} 7.4308;6.6482;6.0074;5.2248;2.3075;1.6018;1.5249;1.4348;1.3844;0.96159 -;-;-;-;-;-;-;-;-;- 867 + 1 1.948 54589.4 1.0 14130 5765 19895 HBL1_DMSO_200M_050219_2,19897 HBL1_DMSO_200M_050219_2,19897,MPLERMKGIS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19898 108.05 800.0 195620.0 25 0 14777.0 + 11625 GLAGFFASV 9 101 868.4564489568605 867.4491724902605 1 868.4568969607353 MULTI CID FTMS 0 0 0 19895 127026.140625 0.8877080574375675 11 -0.140777587890625 3 Unmodified _GLAGFFASV_ ENSG00000112759|ENST00000371755|SLC29A1;nc|ENSG00000112759|Q99808-2|SLC29A1 101.72198241140316 0.010086100337927 4 RG{M(Oxidation (M))|F}ADV 6 5 55.213 0.0 0.0 6.365 0.0 0.0 204.1114063947281 0.0 204.1114063947281 0.0 7.284700126913393 0.0 0.0 0 0.4247425010840047 0.0 0.5 1.4361818737241734 RG{M(Oxidation (M))|F}ADV 6.365 - 4301 1 1.948 106665.0 0.7699999809265137 14131 5765 19895 HBL1_DMSO_200M_050219_2,19898 HBL1_DMSO_200M_050219_2,19898,GLAGFFASV True True GLAGFFASV 108.04687 868.456896960735 1213501.5 19895.0 nc|ENSG00000112759|Q99808-2|SLC29A1;;ENSG00000112759|ENST00000371755|SLC29A1 7.953337510426839 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19903 108.07 254.0 277440.0 25 0 26781.0 + 31058 RLIESLFTI 9 60 546.3267471903026 1090.6389414474052 2 546.3268310427666 MULTI CID FTMS 0 0 0 19902 241794.453125 0.8083002375251255 7 -0.1047744750976562 1 Unmodified _RLIESLFTI_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 49.55428908609986 0.0413471690215031 4 [R{I|L}]{I|L}ES{I|L}{M(Oxidation (M))|F}T{I|L} 9 0 + 67.942 0.0 0.0 6.2296 6.2296 73.749 0.0 0.0 0.0 0.5115252244738144 16.478174818886373 0.5115252244738144 0.5115252244738144 0 0.8807196863200843 0.0 1.2302046884880935 0.0 + + [R{I|L}]{I|L}ES{I|L}{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L};[{I|L}V][W{I|L}]S{I|L}{M(Oxidation (M))|F}T{I|L} 6.2296;6.1827;6.0681 +;-;- + 123 1 1.948 59756.7 1.0 14132 5769 19902 HBL1_DMSO_200M_050219_2,19903 HBL1_DMSO_200M_050219_2,19903,RLIESLFTI True True RLIESLFTI 108.06615 546.326831042767 5543227.5 19902.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 5.933698972066243 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19906 108.09 800.0 223270.0 25 0 24073.0 + 35660 SVDLLLLEL 9 93 1014.6125060644932 1013.6052295978932 1 1014.608874499798 MULTI CID FTMS 0 0 0 19905 105320.296875 0.2501684986503035 -52 0.3900833129882812 1 Unmodified _SVDLLLLEL_ ENSG00000178685|ENST00000313028|PARP10 133.70201269244603 0.0112873236905593 4 {[QN]|[E{I|L}]|[KN]}TA{I|L}{I|L}{I|L}E{I|L} 9 4 + 99.285 0.0 0.0 9.7952 9.7952 80.968 0.0 0.0 0.0 19.03089986991944 16.478174818886373 16.478174818886373 0.4845500650402812 0 1.1883753548010498 1.3010299956639813 2.278659694992122 0.0 {[QN]|[E{I|L}]|[KN]}TA{I|L}{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}TA{I|L}{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}TA{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}TA{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}T{I|L}A{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}T{I|L}A{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}TA{I|L}E{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}AT{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}AT{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}T{I|L}A{I|L}E{I|L} 9.7952;9.7474;9.291;9.2432;9.0066;8.9588;8.7344;8.6431;8.5953;8.278 -;-;-;-;-;-;-;-;-;- 6238 1 1.948 119789.8 0.3600000143051147 14133 5771 19905 HBL1_DMSO_200M_050219_2,19906 HBL1_DMSO_200M_050219_2,19906,SVDLLLLEL True False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19909 108.11 800.0 117460.0 25 0 14704.0 + 38923 TVLQELINV 9 115 514.8027890516511 1027.591025170102 2 514.8033325076103 MULTI CID FTMS 0 0 0 19908 85634.953125 0.1003391765688824 -20 0.1339187622070312 1 Unmodified _TVLQELINV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 74.92900055777586 0.0191935851694334 4 {[TV]|[{I|L}S]}{I|L}QE{I|L} 6 3 61.34 0.0 0.0 5.9693 0.0 0.0 0.0 341.1816704192683 341.1816704192683 32.82290601763427 0.0 0.0 0.0 0 0.3054621874040891 2.0 1.7166152729074455 0.5 + {[TV]|[{I|L}S]}{I|L}QE{I|L} 5.9693 + + 980 1 1.948 75268.6 0.3799999952316284 14134 5773 19908 HBL1_DMSO_200M_050219_2,19909 HBL1_DMSO_200M_050219_2,19909,TVLQELINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19910 108.12 800.0 204130.0 25 0 7760.6 + 23320 LTALALML 8 98 845.5163329313693 844.5090564647693 1 847.5204955935478 MULTI CID FTMS 0 0 0 19908 153556.75 0.7643222063825005 14 -0.2103500366210937 2 Unmodified _LTALALML_ ENSG00000141349|ENST00000269097|G6PC3 56.541270873467816 0.1144128637334507 4 [{I|L}A]TA{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 8 2 + 57.133 0.0 0.0 6.7652 6.7652 76.167 0.0 0.0 0.0 0.6694678963061307 0.6694678963061307 0.6694678963061307 0.6694678963061307 0 0.3494850021680094 0.9208187539523752 1.805462187404089 0.0 [{I|L}A]TA{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}T]AA{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A]T{I|L}A{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}T]A{I|L}A{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A]AT{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A]{I|L}TA{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A]T{I|L}{I|L}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}T]A{I|L}{I|L}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A]{I|L}AT{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}A]{I|L}T{I|L}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.7652;6.6859;6.2524;6.1731;5.5289;5.3039;5.1995;5.1203;4.3652;4.251 -;-;-;+;-;-;-;-;-;- + 1667 1 1.948 111748.6 0.9800000190734864 14135 5773 19908 HBL1_DMSO_200M_050219_2,19910 HBL1_DMSO_200M_050219_2,19910,LTALALML True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19913 108.14 408.0 202540.0 25 0 37326.0 + 3923 DALHNLFYI 9 75 553.2878775349543 1104.5612021367083 2 553.2878906130791 MULTI CID FTMS 0 0 0 19912 193575.890625 1.0 0 0.0 1 Unmodified _DALHNLFYI_ ENSG00000122512|ENST00000265849|PMS2;nc|ENSG00000122512|P54278-3|PMS2 27.628801355627647 0.1796483985696185 4 [HN]{I|L}{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}Y{I|L} 9 4 + 68.963 0.0 0.0 6.2434 6.2434 78.571 0.0 0.0 0.0 13.295671638727027 13.96513953503316 13.295671638727027 3.0102999566398125 0 0.8807196863200843 1.3979400086720375 0.3807196863200844 0.3494850021680094 [HN]{I|L}{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}Y{I|L};[HN]{I|L}{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}Y{I|L};[HN]{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}Y{I|L};[HN]{I|L}{M(Oxidation (M))|F}{[DA]|[EG]}{I|L}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}W{M(Oxidation (M))|F}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}H{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}H{M(Oxidation (M))|F}W{I|L}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}Y{I|L};[H{I|L}]{[DA]|[EG]}N{I|L}{M(Oxidation (M))|F}Y{I|L};[H{I|L}]N{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}Y{I|L} 6.2434;5.9709;5.6262;5.1943;5.0397;4.8184;4.6078;4.5459;4.4328;4.4328 -;-;-;-;-;-;-;-;-;- 455 1 1.948 68394.1 1.0 14136 5775 19912 HBL1_DMSO_200M_050219_2,19913 HBL1_DMSO_200M_050219_2,19913,DALHNLFYI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19914 108.15 800.0 167110.0 25 0 45214.0 + 25583 NFFPSGIDF 9 73 1043.4827342291153 1042.4754577625154 1 1043.482714831829 MULTI CID FTMS 0 0 0 19912 89165.046875 0.3946653507842214 -17 0.1478118896484375 2 Unmodified _NFFPSGIDF_ ENSG00000198492|ENST00000373812|YTHDF2;nc|ENSG00000198492|Q9Y5A9-2|YTHDF2 103.35351024395868 0.0092202910191236 4 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}P[SG]{I|L}D{M(Oxidation (M))|F} 9 0 + 66.563 0.0 0.0 6.3851 6.3851 84.962 0.0 0.0 0.0 7.863642525498037 16.478174818886373 7.863642525498037 7.701812293369841 0 1.75 0.0 0.9291746928241124 1.411954370472159 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}P[SG]{I|L}D{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D{M(Oxidation (M))|F};[PS]G{I|L}{M(Oxidation (M))|F}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F};[PS]G{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND{M(Oxidation (M))|F};[PS]G{I|L}N{M(Oxidation (M))|F}{M(Oxidation (M))|F}D{M(Oxidation (M))|F};[PS]G{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]QD{M(Oxidation (M))|F};[PS]G{M(Oxidation (M))|F}{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F};[PS]G{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}ND{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[SA]|[TG]}[KS]QD{M(Oxidation (M))|F};[PS]{M(Oxidation (M))|F}G[{M(Oxidation (M))|F}V]QD{M(Oxidation (M))|F} 6.3851;5.6463;5.6308;5.5543;5.2985;4.8403;4.8201;4.7437;4.4636;4.3944 +;-;-;-;-;-;-;-;-;- + 1459 1 1.948 90855.8 0.3700000047683716 14137 5775 19912 HBL1_DMSO_200M_050219_2,19914 HBL1_DMSO_200M_050219_2,19914,NFFPSGIDF True True NFFPSGIDF 108.14983 1043.48271483183 2403707.75 19912.0 nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;;ENSG00000198492|ENST00000373812|YTHDF2 6.901209672292073 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19915 108.16 800.0 83685.0 25 0 4799.2 -1 0 86 802.1333514708648 3204.504300017059 4 802.6347534060478 MULTI CID FTMS 0 0 0 19912 69212.5078125 0.7901178380640331 14 -0.1830520629882812 3 4 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 52.344 0.0 0.0 1.6335 0.0 0.0 0.0 2262.9561791398005 2262.9561791398005 36.542294029923 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 1.6335 - 503 1 1.948 53964.0 0.2899999916553497 14138 5775 19912 HBL1_DMSO_200M_050219_2,19915 HBL1_DMSO_200M_050219_2,19915, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19917 108.18 518.0 403750.0 25 0 26063.0 -1 0 110 1102.857378084061 3305.550304852384 3 1103.192431628704 MULTI CID FTMS 0 0 0 19916 263433.96875 0.1644972191206481 71 -0.6441116333007812 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 62.853 0.0 0.0 1.9014 0.0 0.0 0.0 2264.938147802694 2264.938147802694 8.564370426223284 0.0 0.0 0.0 0 2.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9014 - 750 1 1.948 143257.9 1.0 14139 5776 19916 HBL1_DMSO_200M_050219_2,19917 HBL1_DMSO_200M_050219_2,19917, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19918 108.18 265.0 435960.0 25 0 31844.0 -1 0 90 827.3952131853972 3305.5517468751887 4 827.8972656130791 MULTI CID FTMS 0 0 0 19916 268940.3125 0.1435281074661053 73 -0.6645736694335938 2 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 56.137 0.0 0.0 1.6983 0.0 0.0 0.0 2264.9383091601308 2264.9383091601308 38.48058946999288 0.0 0.0 0.0 0 1.5 0.0 0.3054621874040891 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.6983 - 412 1 1.948 92095.9 1.0 14140 5776 19916 HBL1_DMSO_200M_050219_2,19918 HBL1_DMSO_200M_050219_2,19918, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19921 108.19 73.0 794940.0 25 0 100170.0 + 26663 NYIDRFLSSM 10 60 623.2999107006698 1244.5852684681397 2 623.3002807497978 MULTI CID FTMS 0 0 0 19920 643371.5 0.3453938655648898 19 -0.18829345703125 1 Unmodified _NYIDRFLSSM_ ENSG00000145386|ENST00000274026|CCNA2 79.42699986076722 0.0175374121712975 4 [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM 10 0 + 90.143 0.0 0.0 7.2428 7.2428 95.838 0.0 0.0 0.0 23.50711233356286 77.92464714820923 23.50711233356286 90.1431346443728 0 2.742992819099939 2.0 0.3807196863200844 0.7302046884880937 + + [YN]{I|L}DR{M(Oxidation (M))|F}{I|L}SSM 7.2428 + + 132 1 1.948 50618.0 1.0 14141 5778 19920 HBL1_DMSO_200M_050219_2,19921 HBL1_DMSO_200M_050219_2,19921,NYIDRFLSSM True True NYIDRFLSSM 108.18924 623.300280749798 47272992.0 19920.0 ENSG00000145386|ENST00000274026|CCNA2 9.770559946695965 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19922 108.2 800.0 115870.0 25 0 8268.5 + 42351 VTDDILIGI 9 84 958.5452395326952 957.5379630660952 1 958.5461913943292 MULTI CID FTMS 0 0 0 19920 85163.6875 0.6202914318490126 20 -0.1921844482421875 2 Unmodified _VTDDILIGI_ ENSG00000183346|ENST00000648843|CABCOCO1;nc|ENSG00000183346|Q8IVU9|CABCOCO1 48.345845343767074 0.0439967357579942 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}SD{I|L}A{I|L}V 9 6 + 66.578 0.0 0.0 6.9531 6.9531 76.241 0.0 0.0 0.0 1.7609125905568137 10.268024924119672 1.7609125905568137 0.45371572735597 0 0.0 0.0 2.0994850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}SD{I|L}A{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}DS{I|L}{I|L}A{I|L}V;{I|L}{I|L}DSD{I|L}A{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}SD{I|L}{I|L}A{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}SD{I|L}{I|L}AV;{NN|[MP]|[D{I|L}]|[EV]}DS{I|L}{I|L}{I|L}AV;{[QN]|[E{I|L}]|[KN]}VSD{I|L}A{I|L}V;[VS]ED{I|L}{I|L}A{I|L}V;{I|L}{I|L}DSD{I|L}{I|L}AV;{NN|[MP]|[D{I|L}]|[EV]}SD{I|L}{I|L}{I|L}AV 6.9531;6.9057;6.7692;6.7472;6.5601;6.5127;6.4548;6.4328;6.3762;6.3542 -;-;-;-;-;-;-;-;-;- 5448 1 1.948 68314.9 0.3799999952316284 14142 5778 19920 HBL1_DMSO_200M_050219_2,19922 HBL1_DMSO_200M_050219_2,19922,VTDDILIGI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19923 108.22 800.0 78467.0 25 0 7614.6 39995 VGCSRVGERAL 11 90 573.8054963523042 1145.5964397714083 2 573.8058959841728 MULTI CID FTMS 0 0 0 19920 81771.8671875 0.2074394688052375 -78 0.6238861083984375 3 Unmodified _VGCSRVGERAL_ ENST00000448568.6_1_11:62473033-62473631:-|nuORF 17.11289562659939 0.6791789249425932 4 [PA]EE{I|L}{M(Oxidation (M))|F}T 7 10 36.194 0.0 0.0 3.1594 0.0 0.0 0.0 355.20151724627084 355.20151724627084 15.392503768365202 0.0 0.0 0.0 0 0.0 0.638272163982407 0.8252574989159953 0.0 [PA]EE{I|L}{M(Oxidation (M))|F}T 3.1594 - 502 1 1.948 53973.7 0.8600000143051147 14143 5778 19920 HBL1_DMSO_200M_050219_2,19923 HBL1_DMSO_200M_050219_2,19923,VGCSRVGERAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19930 108.25 800.0 109310.0 25 0 11980.0 44757 YPLHILFV 8 109 501.2946560087982 1000.5747590843964 2 501.2937805056572 MULTI CID FTMS 0 0 0 19929 68986.375 0.2181352432895837 -25 0.25469970703125 1 Unmodified _YPLHILFV_ ENSG00000100280|ENST00000357586|AP1B1;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1 32.45364647766026 0.3613649037604678 4 [H{I|L}]PRV{I|L} 6 6 32.36 0.0 0.0 3.2342 0.0 0.0 0.0 282.1095850944152 282.1095850944152 5.0975874591377135 0.0 0.0 0.0 0 0.7302046884880937 0.744727494896694 0.0 0.3252574989159953 [H{I|L}]PRV{I|L} 3.2342 - 488 1 1.948 67894.4 0.3400000035762787 14144 5784 19929 HBL1_DMSO_200M_050219_2,19930 HBL1_DMSO_200M_050219_2,19930,YPLHILFV False True DGLLVLCRI 108.25326 501.293780505657 2430013.25 19929.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1;;ENST00000570129.1_1_16:27494722-27497377:-|nuORF -0.1522265871365865 2.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19931 108.27 800.0 165550.0 25 0 17488.0 + 39981 VGAVDILL 8 85 799.492449283822 798.485172817222 1 799.4933349490166 MULTI CID FTMS 0 0 0 19929 114796.1328125 0.2681047799811468 25 -0.2570724487304687 2 Unmodified _VGAVDILL_ ENSG00000144935|ENST00000476941|TRPC1 63.393752934501535 0.1160198504584336 4 [VG]{I|L}GD{I|L}{I|L}{I|L} 8 2 + 66.79 0.0 0.0 8.3645 8.3645 63.491 0.0 0.0 0.0 4.771212547196626 16.40978057358332 4.771212547196626 0.0 0 0.3252574989159953 1.6989700043360187 1.1421590589602533 0.0 [VG]{I|L}GD{I|L}{I|L}{I|L};[VG]EGV{I|L}{I|L}{I|L};[VG]ADV{I|L}{I|L}{I|L};[VG]DAV{I|L}{I|L}{I|L};[VG]AVD{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}DGV{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}VGD{I|L}{I|L}{I|L};[VG]{I|L}DG{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}GDV{I|L}{I|L}{I|L};[VG]EVG{I|L}{I|L}{I|L} 8.3645;8.3645;8.2432;7.9875;7.8662;7.767;7.767;7.6832;7.6456;7.3062 -;-;-;-;+;-;-;-;-;- + 1092 1 1.948 94310.1 0.3899999856948852 14145 5784 19929 HBL1_DMSO_200M_050219_2,19931 HBL1_DMSO_200M_050219_2,19931,VGAVDILL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19932 108.28 780.0 127520.0 25 0 19669.0 + 1609 ALLQEIVNI 9 102 506.8057206733949 1011.59688841359 2 506.8057739138603 MULTI CID FTMS 0 0 0 19929 88652.3046875 0.4292798128577522 -16 0.1820755004882812 3 Unmodified _ALLQEIVNI_ ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9;nc|ENSG00000144580|Q92600-3|CNOT9 74.42276476219924 0.019389277360085 4 [{I|L}A]GE{I|L}A{I|L} 7 4 51.303 0.0 0.0 5.0715 0.0 0.0 0.0 341.1823573902031 341.1823573902031 25.7521226932964 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.6505149978319906 0.0 [{I|L}A]GE{I|L}A{I|L} 5.0715 - 2393 1 1.948 79605.1 1.0 14146 5784 19929 HBL1_DMSO_200M_050219_2,19932 HBL1_DMSO_200M_050219_2,19932,ALLQEIVNI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19935 108.3 800.0 152060.0 25 0 14186.0 + 30092 QVEPFWMKL 9 114 589.3072672125238 1176.5999814918475 2 589.3077270388603 MULTI CID FTMS 0 0 0 19934 90128.1640625 0.2371861865114385 61 -0.5231094360351562 1 Unmodified _QVEPFWMKL_ REV__ENSG00000118997|ENST00000312428|DNAH7;REV__nc|ENSG00000118997|Q8WXX0-4|DNAH7 24.020572477871973 0.2255576514309169 4 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L} 9 -1 + 97.379 0.0 0.0 8.2763 8.2763 81.926 0.0 0.0 0.0 30.457574905606734 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 1.700061205686631 1.3979400086720375 0.3494850021680094 0.5102396519197265 MP{I|L}E{M(Oxidation (M))|F}NWK{I|L};MP{I|L}E{M(Oxidation (M))|F}NW{I|L}K;MP{I|L}E{M(Oxidation (M))|F}GGWK{I|L};MP{I|L}E{M(Oxidation (M))|F}GGW{I|L}K;M{I|L}PE{M(Oxidation (M))|F}NWK{I|L};M{I|L}PE{M(Oxidation (M))|F}NW{I|L}K;M{I|L}PE{M(Oxidation (M))|F}GGWK{I|L};M{I|L}PE{M(Oxidation (M))|F}GGW{I|L}K;MP{I|L}E{M(Oxidation (M))|F}[W{I|L}]NK;MP{I|L}E{M(Oxidation (M))|F}[W{I|L}]GGK 8.2763;8.1267;7.4937;7.344;7.3198;7.1702;6.5372;6.3876;5.4949;4.7122 -;-;-;-;-;-;-;-;-;- 3032 + 1 1.948 96482.8 0.8100000023841858 14147 5786 19934 HBL1_DMSO_200M_050219_2,19935 HBL1_DMSO_200M_050219_2,19935,QVEPFWMKL False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 19943 108.34 800.0 172790.0 25 0 12736.0 + 10110 FPVLYLDL 8 85 979.5505312197556 978.5432547531556 1 979.5512573122978 MULTI CID FTMS 0 0 0 19942 96902.2109375 0.7720811079987551 3 -0.039703369140625 1 Unmodified _FPVLYLDL_ ENSG00000167700|ENST00000301327|MFSD3;ENST00000528047.5_1_8:145736154-145736544:+|nuORF 82.93947374210147 0.0789933294625693 4 [VP]{M(Oxidation (M))|F}{I|L}{I|L}YEV 8 6 + 77.344 0.0 0.0 7.904 7.904 80.177 0.0 0.0 0.0 1.4215905896025305 3.634993639681312 1.4215905896025305 1.2371250542002343 0 1.3979400086720375 1.5228787452803376 0.0 0.0 [VP]{M(Oxidation (M))|F}{I|L}{I|L}YEV;[VP]{I|L}{M(Oxidation (M))|F}{I|L}YEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}{I|L}YEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}{I|L}YVE;[VP]{M(Oxidation (M))|F}{I|L}{I|L}YVE;[VP]{I|L}{M(Oxidation (M))|F}{I|L}YVE;[VP]{I|L}{I|L}{M(Oxidation (M))|F}YEV;[VP]{M(Oxidation (M))|F}{I|L}Y{I|L}EV;[VP]{I|L}{M(Oxidation (M))|F}Y{I|L}EV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}Y{I|L}EV 7.904;7.7776;7.7587;7.5326;7.2888;7.1623;7.1128;7.0593;6.9329;6.914 -;-;-;-;-;-;-;-;-;- 1832 1 1.948 95817.8 0.4099999964237213 14148 5793 19942 HBL1_DMSO_200M_050219_2,19943 HBL1_DMSO_200M_050219_2,19943,FPVLYLDL True True FPVILYEV 108.34166 979.551257312298 1052392.0 19942.0 ENST00000454201.5_1_3:50363554-50364527:-|nuORF;;ENSG00000114383|ENST00000232496|TUSC2;;ENST00000421918.1_1_3:50363554-50364574:-|nuORF 3.727915048599243 1.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19944 108.36 800.0 196800.0 25 0 23872.0 44364 YLRLRHPLSV 10 79 627.3761949103468 1252.7378368874936 2 627.3768798708916 MULTI CID FTMS 0 0 0 19942 100345.6875 0.4369506414518401 -22 0.2550277709960937 2 Unmodified _YLRLRHPLSV_ ENSG00000176396|ENST00000390658|EID2;nc|ENSG00000176396|Q8N6I1-2|EID2 53.832793166522166 0.0576554960245129 4 [{I|L}P]SVT{I|L}D{I|L}P{I|L}S 11 7 69.673 0.0 0.0 5.5616 0.0 0.0 0.0 114.05946709673108 114.05946709673108 54.979885958942674 0.0 0.0 0.0 0 1.218765315847925 1.3979400086720375 1.2059771852360797 0.0 [{I|L}P]SVT{I|L}D{I|L}P{I|L}S 5.5616 - 374 1 1.948 122648.2 0.9399999976158142 14149 5793 19942 HBL1_DMSO_200M_050219_2,19944 HBL1_DMSO_200M_050219_2,19944,YLRLRHPLSV True False RILDIDIPLSV 108.35549 627.376879870892 4167505.5 19942.0 ENSG00000115112|ENST00000263707|TFCP2L1 4.34090252717336 2.0 False 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19946 108.36 62.0 893460.0 25 0 99852.0 + 38924 TVLQELINV 9 87 514.8027890516511 1027.591025170102 2 514.8030883669853 MULTI CID FTMS 0 0 0 19945 741659.875 0.8690089552925218 1 -0.0053939819335937 1 Unmodified _TVLQELINV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 74.92900055777586 0.0191935851694334 4 {[TV]|[{I|L}S]}{I|L}QE{I|L} 6 3 56.036 0.0 0.0 5.4531 0.0 0.0 0.0 341.1829462533805 341.1829462533805 23.82576888900239 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.8494850021680094 0.6861818737241735 + {[TV]|[{I|L}S]}{I|L}QE{I|L} 5.4531 + + 594 1 1.948 46064.2 1.0 14150 5794 19945 HBL1_DMSO_200M_050219_2,19946 HBL1_DMSO_200M_050219_2,19946,TVLQELINV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19949 108.37 283.0 445500.0 25 0 51373.0 + -1 IPISNILMV 9 90 999.5908769099844 0 999.5898315310478 PEAK CID FTMS 0 0 0 19948 193482.390625 0.0407792884378193 63 -0.5631027221679688 1 ENSG00000137959|ENST00000370751|IFI44L;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 4 VM{I|L}{I|L}{I|L}NS 7 -1 46.252 0.0 0.0 2.3159 0.0 0.0 1016.5893333104 207.1139773004516 1223.7033106108515 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 1.8539171939081167 VM{I|L}{I|L}{I|L}NS 2.3159 - 3198 + 1 1.948 86583.9 1.0 14151 5796 19948 HBL1_DMSO_200M_050219_2,19949 HBL1_DMSO_200M_050219_2,19949, False False IPISNILMV 108.37273 999.589831531048 39639468.0 19948.0 ENSG00000137959|ENST00000370751|IFI44L;;ENST00000486882.5_1_1:79094613-79107491:+|nuORF 3.7418179512023926 1.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19954 108.4 800.0 12350.0 25 0 1204.6 -1 0 27 1120.180957019329 0 1120.180957019329 PEAK CID FTMS 0 0 0 -1 0 1 4 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.948 15758.8 0.3700000047683716 14152 5800 19953 HBL1_DMSO_200M_050219_2,19954 HBL1_DMSO_200M_050219_2,19954, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19955 108.42 800.0 207440.0 25 0 14469.0 + 23321 LTALALML 8 105 845.5163329313693 844.5090564647693 1 845.5161620974541 MULTI CID FTMS 0 0 0 19953 132866.265625 0.0986628517926213 41 -0.37445068359375 2 Unmodified _LTALALML_ ENSG00000141349|ENST00000269097|G6PC3 98.80718514221952 0.0867704633024581 4 [{I|L}A]TA{I|L}{I|L}M{I|L} 8 2 + 80.097 0.0 0.0 9.4844 9.4844 83.274 0.0 0.0 0.0 1.7609125905568137 14.9046305952634 1.7609125905568137 1.7609125905568137 0 0.5891368308784531 0.8538719643217619 2.2302046884880937 0.0 [{I|L}A]TA{I|L}{I|L}M{I|L};[{I|L}T]AA{I|L}{I|L}M{I|L};[{I|L}A]T{I|L}A{I|L}M{I|L};[{I|L}T]A{I|L}A{I|L}M{I|L};[{I|L}A]TA{I|L}M{I|L}{I|L};[{I|L}T]AA{I|L}M{I|L}{I|L};[{I|L}A]T{I|L}AM{I|L}{I|L};[{I|L}T]A{I|L}AM{I|L}{I|L};[{I|L}A]{I|L}TA{I|L}M{I|L};[{I|L}A]AT{I|L}{I|L}M{I|L} 9.4844;9.2759;9.2554;9.0469;8.8336;8.625;8.6045;8.396;8.0395;7.8516 -;-;-;+;-;-;-;-;-;- + 1203 1 1.948 116496.0 0.8799999952316284 14153 5800 19953 HBL1_DMSO_200M_050219_2,19955 HBL1_DMSO_200M_050219_2,19955,LTALALML True True IATIALMI 108.41501 845.516162097454 11607675.0 19953.0 chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;;nc|ENSG00000119969|Q9NRZ9-5|HELLS;;nc|ENSG00000119969|Q9NRZ9-2|HELLS;;nc|ENSG00000119969|Q9NRZ9-3|HELLS;;nc|ENSG00000119969|Q9NRZ9-6|HELLS;;nc|ENSG00000119969|Q9NRZ9-7|HELLS;;ENSG00000119969|ENST00000348459|HELLS;;nc|ENSG00000119969|Q9NRZ9-4|HELLS;;nc|ENSG00000119969|Q9NRZ9-8|HELLS 1.45884468468527 1.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19956 108.43 800.0 50928.0 25 0 2918.9 -1 0 66 1194.06049211326 4772.21286258664 4 1194.312304675579 MULTI CID FTMS 0 0 0 19953 36427.37109375 0.4657292657390643 1 -0.04412841796875 3 4 {I|L} 1 -1 11.99 0.0 0.0 0.25124 0.0 0.0 1629.7059468592422 3026.372116624803 4656.078063484045 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 0.25124 - 11 + 1 1.948 32656.6 0.3600000143051147 14154 5800 19953 HBL1_DMSO_200M_050219_2,19956 HBL1_DMSO_200M_050219_2,19956, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19958 108.45 800.0 184400.0 25 0 11940.0 -1 0 96 1102.857378084061 3305.550304852384 3 1103.525073230267 MULTI CID FTMS 0 0 0 19957 120055.828125 0.0771435636764946 94 -0.8422698974609375 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 51.604 0.0 0.0 1.5611 0.0 0.0 0.0 2264.938507375729 2264.938507375729 23.27623146104628 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.5611 - 215 1 1.948 104090.8 0.5799999833106995 14155 5801 19957 HBL1_DMSO_200M_050219_2,19958 HBL1_DMSO_200M_050219_2,19958, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19960 108.46 446.0 296450.0 25 0 15290.0 -1 0 98 827.3952131853972 3305.5517468751887 4 827.8970214724541 MULTI CID FTMS 0 0 0 19959 181422.5 0.0968215877891846 99 -0.9034500122070312 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 47.062 0.0 0.0 1.4237 0.0 0.0 0.0 2264.93661204788 2264.93661204788 21.751284189090825 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.4237 - 1094 1 1.948 100370.1 1.0 14156 5802 19959 HBL1_DMSO_200M_050219_2,19960 HBL1_DMSO_200M_050219_2,19960, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19961 108.46 185.0 566150.0 25 0 71257.0 22295 LPSAFVESKYI 11 82 627.3424465143629 1252.6703400955255 2 627.3430053591728 MULTI CID FTMS 0 0 0 19959 186022.453125 0.2828872045487638 -26 0.2829437255859375 2 Unmodified _LPSAFVESKYI_ Charlie1a_dup2780|chr8:28020475-28021831:+|2.1636511124764484|0.3671273947285381|2.56|48.0|47|3|sense 24.020572477871973 0.5281922720044371 4 [{I|L}P]SVT{I|L}D{I|L}C 9 7 51.723 0.0 0.0 4.1291 0.0 0.0 0.0 308.14565682820074 308.14565682820074 9.819393642848482 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.6307196863200843 0.0 [{I|L}P]SVT{I|L}D{I|L}C 4.1291 - 395 1 1.948 88143.3 1.0 14157 5802 19959 HBL1_DMSO_200M_050219_2,19961 HBL1_DMSO_200M_050219_2,19961,LPSAFVESKYI False False False False ERV PXD020620_cell_line HBL1_DMSO_200M_050219_2 19963 108.47 248.0 141750.0 25 0 14661.0 39996 VGCSRVGERAL 11 55 573.8054963523042 1145.5964397714083 2 573.8056518435478 MULTI CID FTMS 0 0 0 19962 197357.296875 0.5006574294642715 -53 0.51611328125 1 Unmodified _VGCSRVGERAL_ ENST00000448568.6_1_11:62473033-62473631:-|nuORF 17.11289562659939 0.6791789249425932 4 [PA]EE{I|L}{M(Oxidation (M))|F}T 7 10 32.395 0.0 0.0 2.8278 0.0 0.0 0.0 355.19883169939584 355.19883169939584 9.207282947796642 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 [PA]EE{I|L}{M(Oxidation (M))|F}T 2.8278 - 135 1 1.948 33047.0 1.0 14158 5803 19962 HBL1_DMSO_200M_050219_2,19963 HBL1_DMSO_200M_050219_2,19963,VGCSRVGERAL False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 19968 108.49 428.0 210660.0 25 0 28607.0 + 15211 IPFGTLVAI 9 74 930.5653780931584 929.5581016265584 1 930.5656005740166 MULTI CID FTMS 0 0 0 19967 88102.359375 0.4452345176693374 17 -0.1687164306640625 1 Unmodified _IPFGTLVAI_ ENSG00000125304|ENST00000376387|TM9SF2 70.71552829651908 0.0208223590022201 4 [{I|L}P]{M(Oxidation (M))|F}GTV{I|L}A{I|L} 9 2 + 76.353 0.0 0.0 8.2139 8.2139 83.009 0.0 0.0 0.0 6.721675119240516 16.478174818886373 6.721675119240516 2.40270483492408 0 0.0 1.6989700043360187 1.4749073637206092 0.0 [{I|L}P]{M(Oxidation (M))|F}GTV{I|L}A{I|L};[{I|L}P]{M(Oxidation (M))|F}GT{I|L}VA{I|L};[{I|L}P]{M(Oxidation (M))|F}GTVA{I|L}{I|L};[{I|L}P]{M(Oxidation (M))|F}GT{I|L}G{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GT{I|L}V{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GT{I|L}{I|L}VA{I|L};[{I|L}P]{M(Oxidation (M))|F}GTG{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GT{I|L}VA{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GT{I|L}{I|L}G{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GT{I|L}G{I|L}{I|L}{I|L} 8.2139;7.9554;7.8304;7.5719;7.4908;7.2323;7.1774;7.1073;6.8488;6.4543 -;+;-;-;-;-;-;-;-;- + 900 1 1.948 65202.0 1.0 14159 5807 19967 HBL1_DMSO_200M_050219_2,19968 HBL1_DMSO_200M_050219_2,19968,IPFGTLVAI True True IPFGTLVAI 108.49008 930.565600574017 1835198.0 19967.0 ENSG00000125304|ENST00000376387|TM9SF2 4.335005124409993 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19971 108.5 212.0 334880.0 25 0 46269.0 + + 19856 YPLHILFV 8 80 501.2946560087982 1000.5747590843964 2 501.2946044802666 MULTI CID FTMS 0 0 0 19970 316255.0625 1.0 0 0.0 1 Oxidation (M) _LHLM(Oxidation (M))LLFV_ nc|ENSG00000100280|Q10567-2|AP1B1;ENSG00000100280|ENST00000357586|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;nc|ENSG00000100280|Q10567-3|AP1B1 52.33426049586781 0.1282678332820461 4 [H{I|L}]P{I|L}{I|L}Y{M(Oxidation (M))|F}V 8 -1 + 67.938 0.0 0.0 6.7899 6.7899 80.698 0.0 0.0 0.0 17.033569664897712 54.75009480581832 17.033569664897712 3.0102999566398125 0 0.8252574989159953 1.154901959985743 0.0 0.0 [H{I|L}]P{I|L}{I|L}Y{M(Oxidation (M))|F}V;[H{I|L}]{I|L}P{I|L}Y{M(Oxidation (M))|F}V;[H{I|L}]P{I|L}Y{I|L}{M(Oxidation (M))|F}V;[H{I|L}]{I|L}PY{I|L}{M(Oxidation (M))|F}V;[H{I|L}]PY{I|L}{I|L}{M(Oxidation (M))|F}V;[H{I|L}]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}V;[H{I|L}]P{I|L}{I|L}{M(Oxidation (M))|F}YV;[H{I|L}]{I|L}P{I|L}{M(Oxidation (M))|F}YV;{I|L}{I|L}HP{I|L}Y{M(Oxidation (M))|F}V;{I|L}{I|L}HPY{I|L}{M(Oxidation (M))|F}V 6.7899;6.489;6.489;6.1882;6.1882;5.8873;5.8133;5.5124;4.5948;4.294 -;-;-;-;-;+;-;-;-;- + 270 1 1.948 59739.5 1.0 14160 5809 19970 HBL1_DMSO_200M_050219_2,19971 HBL1_DMSO_200M_050219_2,19971,LHLMLLFV False False YPLHILFV 108.50054 501.294604480267 2513818.25 19970.0 nc|ENSG00000100280|Q10567-2|AP1B1;;ENSG00000100280|ENST00000357586|AP1B1;;nc|ENSG00000100280|Q10567-4|AP1B1;;ENST00000482818.1_1_22:29726183-29727937:-|nuORF;;nc|ENSG00000100280|Q10567-3|AP1B1 4.653672059377034 2.0 False 8.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19976 108.52 403.0 289130.0 25 0 228700.0 -1 0 49 631.3984048221665 630.3911283555665 1 631.3988525271416 MULTI CID FTMS 0 0 0 19975 209812.09375 0.4446809884600622 -107 0.9154586791992188 1 4 S{I|L} 2 -1 15.45 0.0 0.0 2.4509 0.0 0.0 412.2641579959946 0.0 412.2641579959946 0.0 15.450148843166982 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 S{I|L} 2.4509 - 7 + 1 1.948 89659.4 1.0 14161 5813 19975 HBL1_DMSO_200M_050219_2,19976 HBL1_DMSO_200M_050219_2,19976, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19977 108.53 434.0 195960.0 25 0 30557.0 + 1610 ALLQEIVNI 9 108 506.8057206733949 1011.59688841359 2 506.8056518435478 MULTI CID FTMS 0 0 0 19975 132397.21875 0.6411051973012124 13 -0.1563949584960937 2 Unmodified _ALLQEIVNI_ ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9;nc|ENSG00000144580|Q92600-3|CNOT9 64.23631603340823 0.0237365939569086 4 [{I|L}A]EG{I|L}A{I|L} 7 5 44.438 0.0 0.0 4.3928 0.0 0.0 0.0 341.18182428688993 341.18182428688993 17.685442606594506 0.0 0.0 0.0 0 0.2887254899964357 1.3979400086720375 0.5387254899964358 0.0 [{I|L}A]EG{I|L}A{I|L} 4.3928 - 1317 1 1.948 68491.9 1.0 14162 5813 19975 HBL1_DMSO_200M_050219_2,19977 HBL1_DMSO_200M_050219_2,19977,ALLQEIVNI True True ALLQEIVNI 108.53003 506.805651843548 1619297.625 19975.0 ENSG00000144580|ENST00000273064|CNOT9;;nc|ENSG00000144580|Q92600-2|CNOT9;;nc|ENSG00000144580|Q92600-3|CNOT9 0.5137183666229248 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19981 108.55 500.0 194430.0 25 0 29486.0 + 3705 DAFLFNEL 8 83 968.4714814000037 967.4642049334036 1 968.4729492068292 MULTI CID FTMS 0 0 0 19980 128366.7421875 0.1727224503845129 -30 0.253509521484375 1 Unmodified _DAFLFNEL_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 147.05914393524117 9.782697596640856e-06 4 {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}NE{I|L} 8 0 + 81.667 0.0 0.0 8.4413 8.4413 93.906 0.0 0.0 0.0 10.044321917401078 16.40978057358332 10.044321917401078 10.044321917401078 0 1.7856668758921828 0.0 0.9436726795685342 0.9247425010840048 + + {[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}NE{I|L};[VS]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}NE{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GGE{I|L};{[MS]|[{M(Oxidation (M))|F}A]}D{I|L}{M(Oxidation (M))|F}NE{I|L};{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}NE{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}N{M(Oxidation (M))|F}E{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}NE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DA{M(Oxidation (M))|F}NE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AD{M(Oxidation (M))|F}NE{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}G{M(Oxidation (M))|F}GE{I|L} 8.4413;7.4031;7.3507;7.1921;7.1466;7.0342;6.991;6.8868;6.7577;6.4254 +;-;-;-;-;-;-;-;-;- + 3676 1 1.948 70023.8 1.0 14163 5816 19980 HBL1_DMSO_200M_050219_2,19981 HBL1_DMSO_200M_050219_2,19981,DAFLFNEL True True DAFLFNEL 108.54958 968.472949206829 6102026.0 19980.0 ENSG00000183207|ENST00000595090|RUVBL2;;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;;nc|ENSG00000183207|Q9Y230-2|RUVBL2 6.891727606455485 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19982 108.56 504.0 294640.0 25 0 26592.0 + 14099 IAQLMSLI 8 84 888.5218721069944 887.5145956403943 1 888.5228149294853 MULTI CID FTMS 0 0 0 19980 198657.703125 0.5357885959028023 22 -0.2088241577148437 2 Unmodified _IAQLMSLI_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P 96.28474662873226 0.07713372045102 4 [Q{I|L}]A{I|L}MS{I|L}{I|L} 8 2 + 74.635 0.0 0.0 8.4094 8.4094 88.047 0.0 0.0 0.0 8.112431371158749 14.904630595263413 8.112431371158749 5.406818243744255 0 1.0640441945990624 1.0457574905606752 0.8807196863200843 0.2614393726401688 [Q{I|L}]A{I|L}MS{I|L}{I|L};[Q{I|L}]AM{I|L}S{I|L}{I|L};[{I|L}A]GA{I|L}MS{I|L}{I|L};[Q{I|L}]A{I|L}SM{I|L}{I|L};[{I|L}A]Q{I|L}MS{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QA{I|L}S{I|L}{I|L};[Q{I|L}]A{I|L}S{I|L}M{I|L};[QA]{I|L}{I|L}MS{I|L}{I|L};[{I|L}A]GAM{I|L}S{I|L}{I|L};[{I|L}A]GA{I|L}SM{I|L}{I|L} 8.4094;7.8002;7.4954;7.4667;7.3992;7.225;6.9177;6.892;6.8862;6.8472 -;-;-;-;+;-;-;-;-;- + 1369 1 1.948 101427.4 1.0 14164 5816 19980 HBL1_DMSO_200M_050219_2,19982 HBL1_DMSO_200M_050219_2,19982,IAQLMSLI True True IAQLMSLI 108.5585 888.522814929485 2943301.75 19980.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENSG00000080824|ENST00000216281|HSP90AA1;;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;;nc|ENSG00000205940|Q58FF8|HSP90AB2P 3.318228006362915 1.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19987 108.59 800.0 116680.0 25 0 14324.0 + 42870 VVLPLELKL 9 77 512.344109899969 1022.673666866738 2 512.3445922732353 MULTI CID FTMS 0 0 0 19986 52643.69921875 0.5918211111288719 -8 0.0622024536132812 1 Unmodified _VVLPLELKL_ ENSG00000100225|ENST00000266087|FBXO7;ENST00000492535.1_1_22:32889009-32894514:+|nuORF;nc|ENSG00000100225|Q9Y3I1-2|FBXO7;nc|ENSG00000100225|Q9Y3I1-3|FBXO7 47.74868867922204 0.0453060283459952 4 VV{I|L}{I|L}PE{I|L}K{I|L} 9 2 + 69.792 0.0 0.0 6.8244 6.8244 82.18 0.0 0.0 0.0 29.156687756324686 11.382805414149786 11.382805414149786 3.750612633917001 0 0.9247425010840048 1.6989700043360187 1.274227503252014 0.0 VV{I|L}{I|L}PE{I|L}K{I|L};VV{I|L}P{I|L}E{I|L}K{I|L} 6.8244;6.4577 -;+ + 275 + 1 1.948 76486.2 0.8299999833106995 14165 5820 19986 HBL1_DMSO_200M_050219_2,19987 HBL1_DMSO_200M_050219_2,19987,VVLPLELKL True True VVLPLELKL 108.58708 512.344592273235 626009.5625 19986.0 nc|ENSG00000100225|Q9Y3I1-3|FBXO7;;ENST00000492535.1_1_22:32889009-32894514:+|nuORF;;ENSG00000100225|ENST00000266087|FBXO7;;nc|ENSG00000100225|Q9Y3I1-2|FBXO7 3.62037213643392 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19990 108.61 766.0 118010.0 25 0 11936.0 + 41419 VPLEIMIKF 9 96 545.3224270656032 1088.6303011980062 2 545.3216430544853 MULTI CID FTMS 0 0 0 19989 65960.328125 0.7672293794408251 1 -0.0309677124023437 1 Unmodified _VPLEIMIKF_ ENSG00000138385|ENST00000260956|SSB;ENST00000461708.1_1_2:170655414-170662397:+|nuORF 57.72198328787511 0.0273433238377839 4 VP{I|L}E{I|L}M{I|L}K{M(Oxidation (M))|F} 9 0 + 81.346 0.0 0.0 7.4723 7.4723 93.802 0.0 0.0 0.0 48.20538668007522 11.170912423450403 11.170912423450403 16.519472541926717 0 1.385151878060192 1.2218487496163564 0.3494850021680094 0.0 + + VP{I|L}E{I|L}M{I|L}K{M(Oxidation (M))|F};VP{I|L}Y{I|L}[RD]T{I|L};VP{I|L}PVP{I|L}[HA]{M(Oxidation (M))|F};VPPV{I|L}P{I|L}[HA]{M(Oxidation (M))|F};VP{I|L}Y{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};VP{I|L}[RH]{I|L}[HA]{M(Oxidation (M))|F};V{M(Oxidation (M))|F}[HV]VT{I|L}K{M(Oxidation (M))|F};V[RH]{I|L}M[HA]{I|L}{I|L};V{M(Oxidation (M))|F}[YK]V[HA]{I|L}{I|L};V[RH]{I|L}P{I|L}[HA]{M(Oxidation (M))|F} 7.4723;5.9549;5.6634;4.6675;4.2853;3.706;2.8308;2.5181;2.3148;2.3031 +;-;-;-;-;-;-;-;-;- + 1005 + 1 1.948 78238.8 1.0 14166 5822 19989 HBL1_DMSO_200M_050219_2,19990 HBL1_DMSO_200M_050219_2,19990,VPLEIMIKF True True VPLEIMIKF 108.60831 545.321643054485 648835.5625 19989.0 ENST00000461708.1_1_2:170655414-170662397:+|nuORF;;ENSG00000138385|ENST00000260956|SSB 6.222349802652995 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19991 108.62 800.0 109540.0 25 0 15125.0 -1 0 83 724.8404770369258 2895.332802281303 4 725.3418456912041 MULTI CID FTMS 0 0 0 19989 66530.3046875 0.2236161727732045 -33 0.2819976806640625 2 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 57.089 0.0 0.0 1.9717 0.0 0.0 0.0 1854.7161135720032 1854.7161135720032 12.245462655597096 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9717 - 762 1 1.948 75589.2 0.8199999928474426 14167 5822 19989 HBL1_DMSO_200M_050219_2,19991 HBL1_DMSO_200M_050219_2,19991, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19993 108.63 299.0 180570.0 25 0 22146.0 + 38925 TVLQELINV 9 91 514.8027890516511 1027.591025170102 2 514.8031494021416 MULTI CID FTMS 0 0 0 19992 193988.953125 0.227298446600534 30 -0.2360000610351562 1 Unmodified _TVLQELINV_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 71.92227651296345 0.0203558744033348 4 {[TV]|[{I|L}S]}{I|L}QE{I|L}{I|L}NV 9 0 + 78.567 0.0 0.0 7.6457 7.6457 93.804 0.0 0.0 0.0 16.528255045748814 9.889917747712644 9.889917747712644 14.208187539523747 0 0.7742275032520141 2.0 1.4731975075880328 0.5 + + {[TV]|[{I|L}S]}{I|L}QE{I|L}{I|L}NV;{[TV]|[{I|L}S]}{I|L}[AG]E{I|L}{I|L}NV;{NN|[MP]|[D{I|L}]|[EV]}AA{I|L}S{I|L}{I|L}NV;[Q{I|L}]E{I|L}S{I|L}{I|L}NV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}S{I|L}{I|L}NV;{[QN]|[E{I|L}]|[KN]}Q{I|L}S{I|L}{I|L}NV;{[QN]|[E{I|L}]|[KN]}[AG]{I|L}S{I|L}{I|L}NV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}AAS{I|L}{I|L}NV;[DV][VG]{I|L}S{I|L}{I|L}NV;[TA][TP]{I|L}S{I|L}{I|L}NV 7.6457;6.263;6.0373;6.0005;5.9062;5.7075;4.8115;4.7382;4.539;3.9531 +;-;-;-;-;-;-;-;-;- + 288 1 1.948 47671.4 1.0 14168 5823 19992 HBL1_DMSO_200M_050219_2,19993 HBL1_DMSO_200M_050219_2,19993,TVLQELINV True True TVLQELINV 108.63017 514.803149402142 18814603.5 19992.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 5.22221024831136 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19994 108.63 246.0 294670.0 25 0 28520.0 -1 0 66 966.1182774461116 2895.333002938535 3 966.4540893435478 MULTI CID FTMS 0 0 0 19992 413484.46875 0.3712513345853248 -28 0.261260986328125 2 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 60.583 0.0 0.0 2.0924 0.0 0.0 0.0 1854.721639639537 1854.721639639537 21.18562527100117 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.0924 - 161 1 1.948 55015.7 1.0 14169 5823 19992 HBL1_DMSO_200M_050219_2,19994 HBL1_DMSO_200M_050219_2,19994, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 19995 108.65 800.0 134230.0 25 0 34556.0 + 29810 QQHSILLLL 9 102 532.8268228272634 1063.6390927213267 2 532.8272582888603 MULTI CID FTMS 0 0 0 19992 94622.171875 0.4418790871480048 -23 0.237396240234375 3 Unmodified _QQHSILLLL_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 81.89019881105858 0.0170587746866453 4 S{I|L}{I|L}{I|L}{I|L}{I|L} 6 3 60.495 0.0 0.0 5.6875 0.0 0.0 393.177049705275 0.0 393.177049705275 0.0 34.34517247177952 0.0 0.0 0 0.5 0.0 1.610924374808178 0.0 + S{I|L}{I|L}{I|L}{I|L}{I|L} 5.6875 + + 349 1 1.948 85550.5 0.8100000023841858 14170 5823 19992 HBL1_DMSO_200M_050219_2,19995 HBL1_DMSO_200M_050219_2,19995,QQHSILLLL True True QQHSILLLL 108.64863 532.82725828886 2879663.0 19992.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 2.836616357167562 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 19998 108.67 800.0 151920.0 25 0 27601.0 + 33567 SILSLVTKI 9 89 487.3185099492893 972.6224669653786 2 487.3182250857353 MULTI CID FTMS 0 0 0 19997 93726.4765625 0.6704459316183642 -11 0.1225433349609375 1 Unmodified _SILSLVTKI_ ENSG00000143621|ENST00000361891|ILF2 89.40071534611396 0.0152361884002446 4 {[TV]|[{I|L}S]}{I|L}S{I|L}VTK{I|L} 9 0 + 88.968 0.0 0.0 9.1472 9.1472 96.775 0.0 0.0 0.0 61.00858579803864 12.587418566968154 12.587418566968154 17.88364391835536 0 1.610924374808178 2.0 1.079689690656103 0.0 + + {[TV]|[{I|L}S]}{I|L}S{I|L}VTK{I|L};{[TV]|[{I|L}S]}{I|L}S{I|L}K{I|L}S{I|L};{[TV]|[{I|L}S]}VT{I|L}K{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}VTK{I|L}S{I|L};{[TV]|[{I|L}S]}V{I|L}TK{I|L}S{I|L};{I|L}{I|L}SS{I|L}K{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}K{[TV]|[{I|L}S]}{I|L}S{I|L};[{I|L}T]VS{I|L}K{I|L}S{I|L};{I|L}{I|L}SVTK{I|L}S{I|L};[{I|L}T]VVTK{I|L}S{I|L} 9.1472;7.3085;6.2626;6.1296;5.0838;4.7802;4.0209;3.9769;3.6014;2.7981 +;-;-;-;-;-;-;-;-;- + 513 + 1 1.948 97702.4 0.9300000071525574 14171 5825 19997 HBL1_DMSO_200M_050219_2,19998 HBL1_DMSO_200M_050219_2,19998,SILSLVTKI True True SILSLVTKI 108.66895 487.318225085735 845967.1875 19997.0 ENSG00000143621|ENST00000361891|ILF2 2.8683934609095254 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20003 108.7 800.0 118710.0 25 0 9327.4 -1 0 78 1102.857378084061 3305.550304852384 3 1103.527880847454 MULTI CID FTMS 0 0 0 20002 89609.984375 0.0575801578619322 122 -1.0643234252929688 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 47.853 0.0 0.0 1.4477 0.0 0.0 0.0 2264.935423598619 2264.935423598619 19.96584697476848 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.4477 - 112 1 1.948 68101.1 0.4000000059604645 14172 5829 20002 HBL1_DMSO_200M_050219_2,20003 HBL1_DMSO_200M_050219_2,20003, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20007 108.71 66.0 886170.0 25 0 180710.0 + 17760 KQFDDVLIYL 10 69 627.3424465143629 1252.6703400955255 2 627.3428832888603 MULTI CID FTMS 0 0 0 20006 563942.4375 0.8575959352798743 4 -0.0333633422851562 1 Unmodified _KQFDDVLIYL_ ENSG00000105948|ENST00000464848|TTC26;nc|ENSG00000105948|A0AVF1-2|IFT56;nc|ENSG00000105948|A0AVF1-3|IFT56 38.17557092003332 0.1768326257063233 4 [{I|L}P]S[YE][KQ]{I|L}Y{I|L} 10 7 + 32.425 0.0 0.0 2.5885 2.5885 72.698 0.0 0.0 0.0 6.090919918922015 15.005084446084776 6.090919918922015 8.57840941039747 0 0.7742275032520141 1.3979400086720375 0.4247425010840047 0.7302046884880937 [{I|L}P]S[YE][KQ]{I|L}Y{I|L};[{I|L}P]S[YE]{I|L}[KQ]Y{I|L} 2.5885;1.9037 -;- 144 1 1.948 54768.3 1.0 14173 5832 20006 HBL1_DMSO_200M_050219_2,20007 HBL1_DMSO_200M_050219_2,20007,KQFDDVLIYL False True KQFDDVLIYL 108.71029 627.34288328886 5873151.0 20006.0 ENSG00000105948|ENST00000464848|TTC26;;nc|ENSG00000105948|A0AVF1-3|IFT56;;nc|ENSG00000105948|A0AVF1-2|IFT56 1.5663892924785614 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20010 108.72 213.0 275700.0 25 0 21045.0 12749 GVPAEELFTAI 11 80 573.8054963523042 1145.5964397714083 2 573.8059570193291 MULTI CID FTMS 0 0 0 20009 304195.9375 0.7716864718647064 -22 0.2058486938476562 1 Unmodified _GVPAEELFTAI_ chrX:1629939-1633150|29|10.55|0.57|4.21|+|ENST00000381229|ASMT,ASMT;chrX:1629939-1636438|32|10.19|0.46|4.47|+|ENST00000381233|ASMT,ASMT;ENSG00000196433|ENST00000381241|ASMT;nc|ENSG00000292336|P46597-2|ASMT;nc|ENSG00000292336|P46597|ASMT 25.399314129420983 0.4958189927824775 4 [PA]EE{I|L}{M(Oxidation (M))|F}T 7 4 39.085 0.0 0.0 3.4118 0.0 0.0 0.0 355.19980826189584 355.19980826189584 9.047794332023429 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.8494850021680094 0.0 + [PA]EE{I|L}{M(Oxidation (M))|F}T 3.4118 + + 427 1 1.948 50623.3 1.0 14174 5834 20009 HBL1_DMSO_200M_050219_2,20010 HBL1_DMSO_200M_050219_2,20010,GVPAEELFTAI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20011 108.73 800.0 197300.0 25 0 54840.0 + 34109 SLLPPDALVGL 11 71 1094.646110142566 1093.638833675966 1 1094.640551745892 MULTI CID FTMS 0 0 0 20009 92201.3515625 0.8729080720327951 3 -0.0285797119140625 2 Unmodified _SLLPPDALVGL_ ENSG00000101310|ENST00000650089|SEC23B 66.45667989310934 0.0429411148994294 4 A{I|L}VT{I|L}VG{I|L} 8 6 68.793 0.0 0.0 6.2903 0.0 0.0 309.13289076972814 0.0 309.13289076972814 0.0 51.35319634429948 0.0 0.0 0 0.0 0.0 1.4916440611282624 0.0 A{I|L}VT{I|L}VG{I|L} 6.2903 - 1560 1 1.948 104555.1 0.3799999952316284 14175 5834 20009 HBL1_DMSO_200M_050219_2,20011 HBL1_DMSO_200M_050219_2,20011,SLLPPDALVGL True True SLLPPDALVGL 108.7348 1094.64055174589 10983103.0 20009.0 ENSG00000101310|ENST00000650089|SEC23B 6.235670884450276 1.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20022 108.78 291.0 189180.0 25 0 24507.0 + 33997 SLINVGLISV 10 76 507.812999522804 1013.611446112408 2 507.8134643435478 MULTI CID FTMS 0 0 0 20021 170129.375 0.620297965522848 13 -0.1441802978515625 1 Unmodified _SLINVGLISV_ ENSG00000136938|ENST00000339399|ANP32B;ENST00000473205.1_1_9:100746884-100764563:+|nuORF;ENST00000564205.1_1_15:75614457-75614928:-|nuORF;nc|ENSG00000136938|Q92688-2|ANP32B 57.10758569107544 0.0441734977746303 4 {[TV]|[{I|L}S]}{I|L}NVG{I|L} 7 3 49.535 0.0 0.0 4.8869 0.0 0.0 0.0 314.1718458528955 314.1718458528955 28.08098473580911 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.9947026752325154 1.25 + {[TV]|[{I|L}S]}{I|L}NVG{I|L} 4.8869 + + 447 1 1.948 47371.6 1.0 14176 5844 20021 HBL1_DMSO_200M_050219_2,20022 HBL1_DMSO_200M_050219_2,20022,SLINVGLISV True True SLINVGLISV 108.77908 507.813464343548 1985038.25 20021.0 ENST00000473205.1_1_9:100746884-100764563:+|nuORF;;ENST00000564205.1_1_15:75614457-75614928:-|nuORF;;nc|ENSG00000136938|Q92688-2|ANP32B;;ENSG00000136938|ENST00000339399|ANP32B 3.925285736719767 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20023 108.79 504.0 107760.0 25 0 15019.0 + 18222 KVFELDLVTL 10 79 588.84741074342 1175.68026855364 2 588.8475829958916 MULTI CID FTMS 0 0 0 20021 90620.21875 0.1271446599362962 -27 0.2127151489257812 2 Unmodified _KVFELDLVTL_ ENSG00000117724|ENST00000366955|CENPF 28.49450938151212 0.328477364964909 4 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EVK{I|L}VT{I|L} 10 3 + 62.797 0.0 0.0 5.3413 5.3413 71.524 0.0 0.0 0.0 1.7609125905568137 10.452490459521968 1.7609125905568137 1.249387366082999 0 0.8182503180159344 1.3979400086720375 0.3494850021680094 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EVK{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}D{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L}VKVT{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}DVK{I|L}VT{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}D{I|L}VKVT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EV{I|L}KVT{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}DV{I|L}KVT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EVKV{I|L}T{I|L};[{M(Oxidation (M))|F}E]VEVK{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}DV{I|L}T{I|L} 5.3413;5.235;5.1938;5.1915;5.0441;4.788;4.6382;4.6382;4.597;4.532 -;-;-;-;-;-;-;-;-;- 864 1 1.948 52404.8 1.0 14177 5844 20021 HBL1_DMSO_200M_050219_2,20023 HBL1_DMSO_200M_050219_2,20023,KVFELDLVTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20026 108.81 771.0 88921.0 25 0 9079.8 -1 0 115 981.4745108261797 1960.9344687191592 2 982.4776489138604 MULTI CID FTMS 0 0 0 20025 123255.4921875 0.759687827286582 13 -0.136199951171875 1 4 [NP]N{I|L}{I|L} 5 -1 22.179 0.0 0.0 1.1311 0.0 0.0 0.0 1406.6051114019108 1406.6051114019108 8.69103737826158 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 [NP]N{I|L}{I|L} 1.1311 - 1049 1 1.948 53481.7 1.0 14178 5846 20025 HBL1_DMSO_200M_050219_2,20026 HBL1_DMSO_200M_050219_2,20026, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20029 108.83 800.0 151690.0 25 0 30670.0 + 19973 LIIDEIHLL 9 76 539.8291431824354 1077.6437334316706 2 539.8287841677666 MULTI CID FTMS 0 0 0 20028 124408.5546875 0.4577100057853657 -13 0.0770339965820312 1 Unmodified _LIIDEIHLL_ ENSG00000112249|ENST00000369162|ASCC3 77.98433622928108 0.0180125044636492 4 {I|L}{I|L}{I|L}DE{I|L}H{I|L}{I|L} 9 0 + 87.82 0.0 0.0 8.1493 8.1493 86.19 0.0 0.0 0.0 36.57312836760731 7.8706527319221635 7.8706527319221635 4.247425010840047 0 1.174742501084005 2.0 1.274227503252014 0.0 + + {I|L}{I|L}{I|L}DE{I|L}H{I|L}{I|L};{I|L}{I|L}{I|L}DE{I|L}{I|L}H{I|L} 8.1493;7.7551 +;- + 425 + 1 1.948 97989.7 0.3400000035762787 14179 5848 20028 HBL1_DMSO_200M_050219_2,20029 HBL1_DMSO_200M_050219_2,20029,LIIDEIHLL True True LIIDEIHLL 108.82821 539.828784167767 1687375.0 20028.0 ENSG00000112249|ENST00000369162|ASCC3 2.274770637353261 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20034 108.86 800.0 206300.0 25 0 15514.0 -1 0 113 827.3952131853972 3305.5517468751887 4 827.8976318240166 MULTI CID FTMS 0 0 0 20033 71836.3046875 0.0383376101682613 149 1 4 VEVG{I|L}VPP[KT] 10 -1 49.831 0.0 0.0 1.5075 0.0 0.0 2267.954630706157 0.0 2267.954630706157 0.0 20.33573764847404 0.0 0.0 0 0.5 0.0 2.091129063296272 0.0 VEVG{I|L}VPP[KT] 1.5075 - 5316 + 1 1.948 121286.0 0.6800000071525574 14180 5852 20033 HBL1_DMSO_200M_050219_2,20034 HBL1_DMSO_200M_050219_2,20034, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20037 108.87 235.0 433740.0 25 0 40029.0 -1 0 88 724.8404770369258 2895.332802281303 4 725.0917236208916 MULTI CID FTMS 0 0 0 20036 288704.46875 0.8625479296098437 1 -0.0177001953125 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 70.143 0.0 0.0 2.4226 0.0 0.0 0.0 1854.7252332717903 1854.7252332717903 27.98004632409178 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.3054621874040891 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.4226 - 2687 1 1.948 83736.5 1.0 14181 5854 20036 HBL1_DMSO_200M_050219_2,20037 HBL1_DMSO_200M_050219_2,20037, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20038 108.88 613.0 245880.0 25 0 39766.0 + 2589 ASLPFTFDV 9 88 996.5029780588774 995.4957015922772 1 996.5045654177666 MULTI CID FTMS 0 0 0 20036 144480.125 0.7913638414908168 11 -0.1309814453125 2 Unmodified _ASLPFTFDV_ ENSG00000088930|ENST00000377191|XRN2;nc|ENSG00000088930|Q9H0D6-2|XRN2 103.74828524460852 0.0090107942103208 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TAVT{M(Oxidation (M))|F}DV 9 5 + 70.074 0.0 0.0 7.0391 7.0391 84.021 0.0 0.0 0.0 21.760912590556806 9.60106590768767 9.60106590768767 4.524436188126501 0 0.9456290139465234 1.6989700043360187 2.0986198691406326 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TAVT{M(Oxidation (M))|F}DV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{M(Oxidation (M))|F}AS{I|L}DV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{M(Oxidation (M))|F}DV[TA]V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TAS{I|L}{M(Oxidation (M))|F}DV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{M(Oxidation (M))|F}DV{I|L}{[SA]|[TG]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{M(Oxidation (M))|F}D{I|L}{[SA]|[TG]}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}ATVT{M(Oxidation (M))|F}DV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TAS{M(Oxidation (M))|F}{I|L}DV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TA{M(Oxidation (M))|F}S{I|L}DV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{M(Oxidation (M))|F}D{I|L}V{[SA]|[TG]} 7.0391;6.5846;6.5512;6.2634;6.0746;6.0719;5.9103;5.8644;5.7626;5.5953 -;-;-;-;-;-;-;-;-;- 1608 1 1.948 100572.9 1.0 14182 5854 20036 HBL1_DMSO_200M_050219_2,20038 HBL1_DMSO_200M_050219_2,20038,ASLPFTFDV True True ASLPFTFDV 108.87973 996.504565417767 1365533.25 20036.0 ENSG00000088930|ENST00000377191|XRN2;;nc|ENSG00000088930|Q9H0D6-2|XRN2 5.784513473510742 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20041 108.89 61.0 668170.0 25 0 91149.0 -1 0 41 966.1182774461116 2895.333002938535 3 966.4540283083916 MULTI CID FTMS 0 0 0 20040 991581.1875 0.8903014914247036 5 -0.06488037109375 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 55.583 0.0 0.0 1.9198 0.0 0.0 0.0 1854.7216364079584 1854.7216364079584 36.64320017660792 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9198 - 54 1 1.948 36600.1 1.0 14183 5856 20040 HBL1_DMSO_200M_050219_2,20041 HBL1_DMSO_200M_050219_2,20041, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20042 108.9 758.0 147400.0 25 0 40808.0 + 29811 QQHSILLLL 9 90 532.8268228272634 1063.6390927213267 2 532.8270751833916 MULTI CID FTMS 0 0 0 20040 106010.40625 0.495061364727728 10 -0.1257781982421875 2 Unmodified _QQHSILLLL_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 96.28474662873226 0.0124266067997264 4 QQHS{I|L}{I|L}{I|L}{I|L}{I|L} 9 0 + 72.505 0.0 0.0 6.8167 6.8167 75.812 0.0 0.0 0.0 0.4575749056067479 10.330145895351848 0.4575749056067479 0.4575749056067479 0 0.8182503180159344 0.0 1.555462187404089 1.9436726795685344 + + QQHS{I|L}{I|L}{I|L}{I|L}{I|L};[HQ]QS{I|L}{I|L}{I|L}{I|L}{I|L};[HQ][AG]S{I|L}{I|L}{I|L}{I|L}{I|L};[HS]QQ{I|L}{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}[HS]QQ{I|L}{I|L}{I|L};{I|L}{I|L}[HS][AG]Q{I|L}{I|L}{I|L};{I|L}{I|L}[HS]Q[AG]{I|L}{I|L}{I|L};QQH{I|L}{I|L}S{I|L}{I|L}{I|L};[HQ]Q{I|L}{I|L}S{I|L}{I|L}{I|L};{I|L}{I|L}[HS]Q{I|L}Q{I|L}{I|L} 6.8167;6.7737;5.908;5.231;4.638;3.7723;3.7723;3.2377;3.1947;3.1491 +;-;-;-;-;-;-;-;-;- + 501 1 1.948 88542.6 1.0 14184 5856 20040 HBL1_DMSO_200M_050219_2,20042 HBL1_DMSO_200M_050219_2,20042,QQHSILLLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20043 108.92 800.0 150040.0 25 0 14477.0 + 33732 SLADLSLL 8 84 831.4824791524387 830.4752026858387 1 831.4830200076103 MULTI CID FTMS 0 0 0 20040 88868.0546875 0.8951822274182945 3 -0.0444412231445312 3 Unmodified _SLADLSLL_ ENSG00000173250|ENST00000311104|GPR151 101.72198241140316 0.0888720693655427 4 {[TV]|[{I|L}S]}AD{I|L}S{I|L}{I|L} 8 0 + 70.957 0.0 0.0 8.5441 8.5441 86.552 0.0 0.0 0.0 4.0220444404238975 14.024174299985006 4.0220444404238975 4.0220444404238975 0 0.9604093769761876 1.0457574905606752 2.075257498915996 0.0 + + {[TV]|[{I|L}S]}AD{I|L}S{I|L}{I|L};{[DA]|[EG]}S{I|L}{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}DA{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}ADS{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}ADS{I|L}{I|L};{[TV]|[{I|L}S]}A{I|L}DS{I|L}{I|L};{[DA]|[EG]}S{I|L}S{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}DAS{I|L}{I|L}{I|L};{[TV]|[{I|L}S]}AS{I|L}D{I|L}{I|L};{[TV]|[{I|L}S]}ASD{I|L}{I|L}{I|L} 8.5441;8.0598;7.9161;7.3061;7.1619;6.9191;6.8218;6.6781;6.5466;6.5158 +;-;-;-;-;-;-;-;-;- + 399 1 1.948 86881.4 0.8199999928474426 14185 5856 20040 HBL1_DMSO_200M_050219_2,20043 HBL1_DMSO_200M_050219_2,20043,SLADLSLL True True DASLISLI 108.9154 831.48302000761 747020.75 20040.0 ENSG00000148840|ENST00000278070|PPRC1 1.75564440091451 1.0 False 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20046 108.93 343.0 355890.0 25 0 81188.0 + 24570 MLFPGSIAL 9 77 948.5224477898608 947.5151713232608 1 948.5228759646416 MULTI CID FTMS 0 0 0 20045 221804.984375 0.8849785081833985 1 -0.0087738037109375 1 Unmodified _MLFPGSIAL_ ENSG00000101367|ENST00000375571|MAPRE1 93.88341677533236 0.0134066622201488 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}M{I|L}A{I|L} 9 4 + 77.766 0.0 0.0 8.2074 8.2074 84.965 0.0 0.0 0.0 10.87205316164642 16.478174818886373 10.87205316164642 3.3939438749951734 0 0.7887254899964358 1.3979400086720375 1.860924374808178 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}M{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSP{M(Oxidation (M))|F}{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}P{M(Oxidation (M))|F}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}{I|L}MA{I|L};[PG]S{I|L}{M(Oxidation (M))|F}M{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSP{I|L}{M(Oxidation (M))|F}A{I|L};[PG]S{I|L}M{M(Oxidation (M))|F}{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}PA{M(Oxidation (M))|F}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}[PG]S{I|L}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}AP{M(Oxidation (M))|F}{I|L} 8.2074;7.8492;7.3903;7.1054;7.06;7.0321;6.7018;6.6461;6.4769;6.4125 -;-;-;-;-;-;-;-;+;- + 1402 1 1.948 84472.5 1.0 14186 5858 20045 HBL1_DMSO_200M_050219_2,20046 HBL1_DMSO_200M_050219_2,20046,MLFPGSIAL True True MLFPGSIAL 108.92806 948.522875964642 4048618.5 20045.0 ENSG00000101367|ENST00000375571|MAPRE1 6.564927101135254 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20049 108.95 800.0 119980.0 25 0 12442.0 + -1 AQITMLQML 9 124 524.7798085035733 1047.5450640739466 2 524.7798339724541 MULTI CID FTMS 0 0 0 20048 86758.7890625 0.6898752243777604 -5 0.0523910522460937 1 Carbamidomethyl (C) _TLC(Carbamidomethyl (C))GLLQML_ ENSG00000137207|ENST00000372422|YIPF3;ENST00000460547.6_1_6:43480707-43481025:-|nuORF 67.34385681178166 0.0221257235307089 4 [AG]A{I|L}TM{I|L}QM{I|L} 10 -1 + 72.894 0.0 0.0 6.9586 6.9586 78.501 0.0 0.0 0.0 1.6175543570025468 10.012262311882772 1.6175543570025468 1.6175543570025468 0 0.7742275032520141 1.3979400086720375 1.5669015600442575 0.4247425010840047 [AG]A{I|L}TM{I|L}QM{I|L};[Q{I|L}]MTA{I|L}QM{I|L};[QA]{I|L}TM{I|L}QM{I|L};[MT]{I|L}QA{I|L}QM{I|L};[Q{I|L}]ATM{I|L}QM{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QTA{I|L}QM{I|L};[AG]{I|L}ATM{I|L}QM{I|L};[AG]{I|L}MTA{I|L}QM{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TQA{I|L}QM{I|L};[AG]A{I|L}TMQ{I|L}M{I|L} 6.9586;6.8042;6.7568;6.6279;6.6142;6.525;6.5031;6.4015;6.3137;6.0204 -;-;-;-;-;-;-;-;-;- 3641 1 1.948 76804.1 0.7699999809265137 14187 5860 20048 HBL1_DMSO_200M_050219_2,20049 HBL1_DMSO_200M_050219_2,20049,TLCGLLQML False False AQITMLQML 108.9485 524.779833972454 809069.625 20048.0 ENSG00000137207|ENST00000372422|YIPF3;;ENST00000460547.6_1_6:43480707-43481025:-|nuORF 4.671397686004639 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20052 108.97 800.0 64301.0 25 0 5089.7 -1 0 55 1102.857378084061 3305.550304852384 3 1103.521777331829 MULTI CID FTMS 0 0 0 20051 58998.40625 0.0379102570898915 155 1 4 [H{I|L}]VE[{I|L}A]Y{I|L} 8 -1 14.614 0.0 0.0 0.44211 0.0 0.0 0.0 2364.0068837920903 2364.0068837920903 3.6451625318508736 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [H{I|L}]VE[{I|L}A]Y{I|L} 0.44211 - 28 1 1.948 42801.0 0.3400000035762787 14188 5862 20051 HBL1_DMSO_200M_050219_2,20052 HBL1_DMSO_200M_050219_2,20052, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20054 108.98 197.0 297130.0 25 0 26595.0 36517 TAFQGPWARL 10 72 573.8054963523042 1145.5964397714083 2 573.8056518435478 MULTI CID FTMS 0 0 0 20053 324262.625 0.8225917910025946 7 -0.0796585083007812 1 Unmodified _TAFQGPWARL_ ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5 18.1463463914782 0.5430639438673815 4 [PA]EE{I|L}{M(Oxidation (M))|F}TA 8 8 46.05 0.0 0.0 4.0197 0.0 0.0 0.0 284.1609288673646 284.1609288673646 19.138760293220862 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.274227503252014 0.0 [PA]EE{I|L}{M(Oxidation (M))|F}TA 4.0197 - 485 1 1.948 49549.2 1.0 14189 5863 20053 HBL1_DMSO_200M_050219_2,20054 HBL1_DMSO_200M_050219_2,20054,TAFQGPWARL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20055 108.99 800.0 169700.0 25 0 61440.0 29655 QNLQRTMIQP 10 61 614.8273270080056 1227.640101082811 2 614.8273803591728 MULTI CID FTMS 0 0 0 20053 90469.0625 0.8224650071823391 -9 0.10675048828125 2 Unmodified _QNLQRTMIQP_ ENST00000394662.2_1_1:89889857-89891799:+|nuORF 13.042465956692816 0.6287021003332052 4 {I|L}[HS] 3 9 15.458 0.0 0.0 1.2591 0.0 0.0 872.4452092030227 0.0 872.4452092030227 0.0 9.771212547196626 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}[HS] 1.2591 - 14 1 1.948 105196.8 0.3400000035762787 14190 5863 20053 HBL1_DMSO_200M_050219_2,20055 HBL1_DMSO_200M_050219_2,20055,QNLQRTMIQP False False False False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 20058 109.01 800.0 115580.0 25 0 30479.0 + 15569 IPYIPTLI 8 83 465.2889789854872 928.5634050377744 2 465.2890502810478 MULTI CID FTMS 0 0 0 20057 91992.9296875 0.6019842570244989 -19 0.2011566162109375 1 Unmodified _IPYIPTLI_ ENSG00000124207|ENST00000262982|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L 56.04830969593885 0.114297258605095 4 [{I|L}P]T{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L} 8 3 + 46.393 0.0 0.0 4.9962 4.9962 70.166 0.0 0.0 0.0 1.2679593918845455 8.667053245199625 1.2679593918845455 1.2679593918845455 0 0.6989700043360187 1.0 1.6549471895720984 0.0 [{I|L}P]T{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}[TP]{I|L}{I|L};[TP]{I|L}{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[TP]{I|L}{I|L}{I|L};[{I|L}P]Y{I|L}[TP]{I|L}{I|L};[{I|L}P]Y[TP]{I|L}{I|L}{I|L} 4.9962;4.8596;4.8587;4.534;3.9172;3.5916 -;-;-;-;+;- + 236 1 1.948 75430.8 0.8600000143051147 14191 5865 20057 HBL1_DMSO_200M_050219_2,20058 HBL1_DMSO_200M_050219_2,20058,IPYIPTLI True True IPYIPTLI 109.00937 465.289050281048 1249539.375 20057.0 ENSG00000124207|ENST00000262982|CSE1L;;nc|ENSG00000124207|P55060-4|CSE1L;;nc|ENSG00000124207|P55060-3|CSE1L 1.1430704196294148 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20062 109.03 800.0 192460.0 25 0 18331.0 + 35661 SVDLLLLEL 9 94 1014.6125060644932 1013.6052295978932 1 1014.613330066204 MULTI CID FTMS 0 0 0 20061 108287.9921875 0.2572176990685365 45 -0.4285964965820312 1 Unmodified _SVDLLLLEL_ ENSG00000178685|ENST00000313028|PARP10 100.37149154755038 0.0107586824602606 4 {I|L}{I|L}ETA{I|L}{I|L}E{I|L} 9 5 + 88.11 0.0 0.0 8.6928 8.6928 79.41 0.0 0.0 0.0 5.328454084868184 16.478174818886373 5.328454084868184 0.1722032235195456 0 0.8296896906561032 1.5228787452803376 2.201163485412895 0.0 {I|L}{I|L}ETA{I|L}{I|L}E{I|L};{I|L}{I|L}ETA{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}TA{I|L}{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}TA{I|L}{I|L}E{I|L}{I|L};{I|L}{I|L}EAT{I|L}{I|L}E{I|L};{I|L}{I|L}EAT{I|L}E{I|L}{I|L};{I|L}{I|L}E{I|L}TA{I|L}E{I|L};{I|L}{I|L}E{I|L}TAE{I|L}{I|L};{I|L}{I|L}ET{I|L}A{I|L}E{I|L};{I|L}{I|L}ET{I|L}AE{I|L}{I|L} 8.6928;8.6758;8.1671;8.1501;7.9745;7.9575;7.8308;7.8138;7.691;7.674 -;-;-;-;-;-;-;-;-;- 6271 1 1.948 102485.1 0.3899999856948852 14192 5868 20061 HBL1_DMSO_200M_050219_2,20062 HBL1_DMSO_200M_050219_2,20062,SVDLLLLEL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20064 109.04 74.0 693700.0 25 0 116810.0 + 18223 KVFELDLVTL 10 70 588.84741074342 1175.68026855364 2 588.8476440310478 MULTI CID FTMS 0 0 0 20063 622542.8125 0.8734584321569844 -2 0.0204620361328125 1 Unmodified _KVFELDLVTL_ ENSG00000117724|ENST00000366955|CENPF 40.23920728925047 0.1550410903091231 4 [{I|L}T]V[R{M(Oxidation (M))|F}]D{I|L}V 8 6 50.116 0.0 0.0 4.2627 0.0 0.0 0.0 229.12189504057667 229.12189504057667 29.481048713086423 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.6694451763165201 0.3807196863200844 [{I|L}T]V[R{M(Oxidation (M))|F}]D{I|L}V 4.2627 - 461 1 1.948 48347.9 1.0 14193 5869 20063 HBL1_DMSO_200M_050219_2,20064 HBL1_DMSO_200M_050219_2,20064,KVFELDLVTL False True KVFELDLVTL 109.03871 588.847644031048 17300076.0 20063.0 ENSG00000117724|ENST00000366955|CENPF 6.691488107045491 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20065 109.05 527.0 203390.0 25 0 11223.0 + 12751 GVPAEELFTAI 11 96 1146.6035969156655 1145.5963204490656 1 1146.605395495892 MULTI CID FTMS 0 0 0 20063 88693.2890625 0.64704736086654 6 -0.0599517822265625 2 Unmodified _GVPAEELFTAI_ chrX:1629939-1633150|29|10.55|0.57|4.21|+|ENST00000381229|ASMT,ASMT;chrX:1629939-1636438|32|10.19|0.46|4.47|+|ENST00000381233|ASMT,ASMT;ENSG00000196433|ENST00000381241|ASMT;nc|ENSG00000292336|P46597-2|ASMT;nc|ENSG00000292336|P46597|ASMT 60.07390631473393 0.0688452368411198 4 [PA]EE{I|L}GV{M(Oxidation (M))|F}TA{I|L} 11 4 + 87.987 0.0 0.0 7.6804 7.6804 83.584 0.0 0.0 0.0 7.367585652254178 60.81454687234421 7.367585652254178 3.0546218740408904 0 0.3807196863200844 0.0 2.423877368056628 0.0 [PA]EE{I|L}GV{M(Oxidation (M))|F}TA{I|L};[PA]EE{I|L}G{M(Oxidation (M))|F}VTA{I|L};[PA]EE{I|L}{M(Oxidation (M))|F}GVTA{I|L};[PA]EEVAV{M(Oxidation (M))|F}TA{I|L};[PA]EE{I|L}G{M(Oxidation (M))|F}TVA{I|L};[PA]EE{I|L}GVT{M(Oxidation (M))|F}A{I|L};[PA]EE{I|L}{M(Oxidation (M))|F}TGVA{I|L};[PA]EEVA{M(Oxidation (M))|F}VTA{I|L};[PA]EE{I|L}{M(Oxidation (M))|F}KEA{I|L};[PA]EE{I|L}{M(Oxidation (M))|F}GTVA{I|L} 7.6804;7.4138;7.1617;6.5598;6.4925;6.3922;6.31;6.2931;6.2892;6.2404 -;-;-;-;-;-;-;-;-;- 6082 1 1.948 71248.4 1.0 14194 5869 20063 HBL1_DMSO_200M_050219_2,20065 HBL1_DMSO_200M_050219_2,20065,GVPAEELFTAI True True GVPAEELFTAI 109.04845 1146.60539549589 2276329.25 20063.0 chrX:1629939-1633150|29|10.55|0.57|4.21|+|ENST00000381229|ASMT,ASMT;;nc|ENSG00000292336|P46597|ASMT;;chrX:1629939-1636438|32|10.19|0.46|4.47|+|ENST00000381233|ASMT,ASMT;;nc|ENSG00000292336|P46597-2|ASMT;;ENSG00000196433|ENST00000381241|ASMT 1.4656211535135906 1.0 True 11.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20069 109.07 800.0 79617.0 25 0 8604.4 + 22417 LPTETFIPVI 10 84 565.3287035437423 1128.6428541542846 2 565.3289672732353 MULTI CID FTMS 0 0 0 20068 64369.67578125 0.522671183578952 -20 0.216033935546875 1 Unmodified _LPTETFIPVI_ ENSG00000119285|ENST00000366582|HEATR1 48.345845343767074 0.089859443182303 4 {I|L}{I|L}{M(Oxidation (M))|F}T 4 8 41.67 0.0 0.0 3.6921 0.0 0.0 327.21388635163527 324.11972986392817 651.3336162155634 0.0 0.0 0.0 0.0 0 0.5 0.0 1.6237125054200234 0.0 {I|L}{I|L}{M(Oxidation (M))|F}T 3.6921 - 207 + 1 1.948 57209.8 0.3400000035762787 14195 5872 20068 HBL1_DMSO_200M_050219_2,20069 HBL1_DMSO_200M_050219_2,20069,LPTETFIPVI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20070 109.08 290.0 240830.0 25 0 54621.0 + 13693 HQILTPFLL 9 73 541.3238773781221 1080.633201823044 2 541.3240844607353 MULTI CID FTMS 0 0 0 20068 162416.34375 0.3698781079359223 -23 0.2282257080078125 2 Unmodified _HQILTPFLL_ chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS 49.93300154707207 0.0405168250806675 4 [HQ]{I|L}{I|L}TM{I|L}{I|L}{I|L} 9 2 + 78.026 0.0 0.0 7.2204 7.2204 81.996 0.0 0.0 0.0 9.76203644159419 48.359790849763655 9.76203644159419 3.0102999566398125 0 1.2302046884880935 0.0 0.8494850021680094 0.2614393726401688 [HQ]{I|L}{I|L}TM{I|L}{I|L}{I|L};[HQ]{I|L}T{I|L}M{I|L}{I|L}{I|L};[H{I|L}]Q{I|L}TM{I|L}{I|L}{I|L};[HQ]{I|L}{I|L}MT{I|L}{I|L}{I|L};[Q{I|L}]H{I|L}TM{I|L}{I|L}{I|L};[H{I|L}]QT{I|L}M{I|L}{I|L}{I|L};[Q{I|L}]HT{I|L}M{I|L}{I|L}{I|L};[H{I|L}][AG]{I|L}TM{I|L}{I|L}{I|L};[H{I|L}][AG]T{I|L}M{I|L}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[HQ]T{I|L}{I|L}{I|L} 7.2204;6.9418;5.9798;5.9179;5.9178;5.7012;5.6392;5.1277;4.8491;4.7929 -;-;-;-;-;-;-;-;-;- 354 1 1.948 63696.9 1.0 14196 5872 20068 HBL1_DMSO_200M_050219_2,20070 HBL1_DMSO_200M_050219_2,20070,HQILTPFLL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20071 109.09 425.0 153880.0 25 0 17055.0 + 41580 VPPEWVPII 9 77 525.3049230647356 1048.595293196271 2 525.3055297732353 MULTI CID FTMS 0 0 0 20068 105870.9609375 0.0544709098809048 -64 0.566375732421875 3 Unmodified _VPPEWVPII_ ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 36.04419817259434 0.0971720506436186 4 [{I|L}P][WD]PVP{I|L}{I|L} 9 4 + 48.183 0.0 0.0 4.595 4.595 69.457 0.0 0.0 0.0 11.706962271689749 18.005507804616826 11.706962271689749 1.7609125905568137 0 1.1069758080123702 2.0 0.0 0.0 [{I|L}P][WD]PVP{I|L}{I|L};[{I|L}P][DP]WVP{I|L}{I|L};[{I|L}P][WD]P[{I|L}P]V{I|L};[{I|L}P][DP]W[{I|L}P]V{I|L};[VP][WE]PVP{I|L}{I|L};[VP][EP]WVP{I|L}{I|L};[{I|L}P]NA[YV]{M(Oxidation (M))|F}{I|L}{I|L};[VP][WE]P[{I|L}P]V{I|L};[{I|L}P]N[YG]{I|L}{M(Oxidation (M))|F}{I|L}{I|L};[VP][EP]W[{I|L}P]V{I|L} 4.595;4.4271;3.9444;3.7764;3.4467;3.2787;2.9966;2.7961;2.7095;2.6281 -;-;-;-;-;+;-;-;-;- + 379 1 1.948 63255.5 1.0 14197 5872 20068 HBL1_DMSO_200M_050219_2,20071 HBL1_DMSO_200M_050219_2,20071,VPPEWVPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20080 109.12 409.0 192060.0 25 0 17029.0 -1 0 77 724.8404770369258 2895.332802281303 4 725.0925170779228 MULTI CID FTMS 0 0 0 20079 180420.046875 0.5390319677625087 27 -0.2725448608398437 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 64.976 0.0 0.0 2.2442 0.0 0.0 0.0 1854.724378779603 1854.724378779603 39.32864278320244 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.2887254899964357 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 2.2442 - 564 1 1.948 66048.7 1.0 14198 5880 20079 HBL1_DMSO_200M_050219_2,20080 HBL1_DMSO_200M_050219_2,20080, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20081 109.14 670.0 180900.0 25 0 21421.0 + 24847 MPLSLLLV 8 83 885.5476240631822 884.5403475965821 1 885.5483276247978 MULTI CID FTMS 0 0 0 20079 97443.9453125 0.4287229575582721 -17 0.1452178955078125 2 Unmodified _MPLSLLLV_ ENST00000231498.7_1_5:37342710-37348640:-|nuORF 70.86452775946826 0.1107857762478427 4 {NN|[MP]|[D{I|L}]|[EV]}S{I|L}{I|L}{I|L}{I|L}V 8 2 + 75.438 0.0 0.0 8.5285 8.5285 80.964 0.0 0.0 0.0 1.059837384595923 11.237125054200234 1.059837384595923 1.059837384595923 0 0.3494850021680094 0.0 2.079689690656103 0.0 {NN|[MP]|[D{I|L}]|[EV]}S{I|L}{I|L}{I|L}{I|L}V;[{I|L}P]MS{I|L}{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}S{I|L}{I|L}{I|L}V;[WE]{I|L}{I|L}{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}S{I|L}{I|L}{I|L}V{I|L};[{I|L}P]MS{I|L}{I|L}V{I|L};[{I|L}P]M{I|L}S{I|L}{I|L}V;{I|L}{I|L}SMP{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}S{I|L}{I|L}V{I|L};[WE]{I|L}{I|L}{I|L}V{I|L} 8.5285;8.4087;7.819;7.8039;7.2581;7.1383;7.0488;6.9253;6.5486;6.5335 -;-;+;-;-;-;-;-;-;- + 326 1 1.948 84714.9 1.0 14199 5880 20079 HBL1_DMSO_200M_050219_2,20081 HBL1_DMSO_200M_050219_2,20081,MPLSLLLV True True MPLSLLLV 109.13557 885.548327624798 1900354.375 20079.0 ENST00000231498.7_1_5:37342710-37348640:-|nuORF 4.643085638682048 1.0 True 8.0 False nuORF PXD020620_cell_line HBL1_DMSO_200M_050219_2 20082 109.15 800.0 124760.0 25 0 37861.0 + 24498 MIIPSLEEL 9 69 1044.563853862816 1043.5565773962162 1 1044.565112292767 MULTI CID FTMS 0 0 0 20079 85634.4609375 0.1165640555488016 42 -0.3926925659179687 3 Unmodified _MIIPSLEEL_ ENSG00000137804|ENST00000559596|NUSAP1;ENST00000558123.5_1_15:41625155-41634596:+|nuORF;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;nc|ENSG00000137804|Q9BXS6-5|NUSAP1;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;nc|ENSG00000137804|Q9BXS6-7|NUSAP1 104.79918948944588 0.0084531067040494 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PSE{I|L}E{I|L} 9 2 + 84.853 0.0 0.0 8.1311 8.1311 79.585 0.0 0.0 0.0 24.13734275855269 55.76803242663607 24.13734275855269 0.6112061033247329 0 1.6382104921644451 1.6989700043360187 1.066901560044258 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PSE{I|L}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PS{I|L}EE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}PSEE{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}SE{I|L}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}S{I|L}EE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P{I|L}SEE{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E[PS]{I|L}E{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E[PS]E{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}EV[TP]E{I|L};{[QN]|[E{I|L}]|[KN]}SPE{I|L}M{I|L}{I|L} 8.1311;8.0726;7.6857;6.9822;6.9236;6.5368;6.1187;5.6733;5.3671;4.5604 -;+;-;-;-;-;-;-;-;- + 836 1 1.948 71747.4 0.3700000047683716 14200 5880 20079 HBL1_DMSO_200M_050219_2,20082 HBL1_DMSO_200M_050219_2,20082,MIIPSLEEL True True MIIPSLEEL 109.14943 1044.56511229277 6256452.0 20079.0 nc|ENSG00000137804|Q9BXS6-5|NUSAP1;;nc|ENSG00000137804|Q9BXS6-2|NUSAP1;;nc|ENSG00000137804|Q9BXS6-4|NUSAP1;;ENSG00000137804|ENST00000559596|NUSAP1;;nc|ENSG00000137804|Q9BXS6-6|NUSAP1;;nc|ENSG00000137804|Q9BXS6-7|NUSAP1;;nc|ENSG00000137804|Q9BXS6-3|NUSAP1;;ENST00000558123.5_1_15:41625155-41634596:+|nuORF 5.498092810312907 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20084 109.16 212.0 407530.0 25 0 38220.0 -1 0 77 966.1182774461116 2895.333002938535 3 966.4539672732352 MULTI CID FTMS 0 0 0 20083 449848.59375 0.4039012427622631 30 -0.2531967163085937 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 52.573 0.0 0.0 1.8158 0.0 0.0 0.0 1854.7211206035047 1854.7211206035047 0.3938128105249205 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8158 - 232 1 1.948 67087.6 1.0 14201 5881 20083 HBL1_DMSO_200M_050219_2,20084 HBL1_DMSO_200M_050219_2,20084, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20085 109.17 800.0 123760.0 25 0 17084.0 + 42779 VVINFDFPKL 10 90 596.3422221212371 1190.669891309274 2 596.3427612185478 MULTI CID FTMS 0 0 0 20083 105680.1875 0.4785415782988594 -15 0.1400299072265625 2 Unmodified _VVINFDFPKL_ ENSG00000110367|ENST00000534980|DDX6 45.739877483867886 0.1051543674217965 4 VV{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F}PK{I|L} 10 0 + 104.4 0.0 0.0 8.7686 8.7686 92.158 0.0 0.0 0.0 71.83751568098923 12.033569664897712 12.033569664897712 9.164539485499247 0 0.8494850021680094 2.0 0.0 1.048455006504028 + + VV{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F}PK{I|L};VV{I|L}GG{M(Oxidation (M))|F}D{M(Oxidation (M))|F}PK{I|L} 8.7686;7.9989 +;- + 330 + 1 1.948 79568.8 0.8700000047683716 14202 5881 20083 HBL1_DMSO_200M_050219_2,20085 HBL1_DMSO_200M_050219_2,20085,VVINFDFPKL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20093 109.21 800.0 88824.0 25 0 4052.9 -1 0 94 827.6458412487322 3306.5542591285284 4 827.8974487185478 MULTI CID FTMS 0 0 0 20092 54433.4375 0.83807406358712 1 -0.0163955688476562 1 4 V{I|L}E{I|L}ASV 7 -1 47.3 0.0 0.0 1.4305 0.0 0.0 2268.962048290441 323.1729830377563 2592.1350313281973 0.0 0.0 0.0 0.0 0 0.5 0.0 1.2614393726401687 0.0 V{I|L}E{I|L}ASV 1.4305 - 847 + 1 1.948 55913.6 0.3000000119209289 14203 5888 20092 HBL1_DMSO_200M_050219_2,20093 HBL1_DMSO_200M_050219_2,20093, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20098 109.24 711.0 123700.0 25 0 10590.0 + 12750 GVPAEELFTAI 11 95 573.8054963523042 1145.5964397714083 2 573.8053466677666 MULTI CID FTMS 0 0 0 20097 97906.609375 0.2483702004101541 36 -0.3485107421875 1 Unmodified _GVPAEELFTAI_ chrX:1629939-1633150|29|10.55|0.57|4.21|+|ENST00000381229|ASMT,ASMT;chrX:1629939-1636438|32|10.19|0.46|4.47|+|ENST00000381233|ASMT,ASMT;ENSG00000196433|ENST00000381241|ASMT;nc|ENSG00000292336|P46597-2|ASMT;nc|ENSG00000292336|P46597|ASMT 22.736283301280096 0.5583477779825423 4 [PA]EE{I|L}{M(Oxidation (M))|F}T 7 4 44.384 0.0 0.0 3.8743 0.0 0.0 0.0 355.19257892014133 355.19257892014133 15.668341737065994 0.0 0.0 0.0 0 0.0 0.958607314841775 1.1989700043360187 0.0 + [PA]EE{I|L}{M(Oxidation (M))|F}T 3.8743 + + 1314 1 1.948 69783.9 1.0 14204 5892 20097 HBL1_DMSO_200M_050219_2,20098 HBL1_DMSO_200M_050219_2,20098,GVPAEELFTAI False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20099 109.25 770.0 105770.0 25 0 17670.0 + 8923 FALGILKI 8 79 437.7916592163143 873.5687654994287 2 437.7913390994072 MULTI CID FTMS 0 0 0 20097 93106.3125 0.8587769196291529 -2 0.00811767578125 2 Unmodified _FALGILKI_ ENSG00000135040|ENST00000361671|NAA35;nc|ENSG00000135040|Q5VZE5-2|NAA35 56.541270873467816 0.1144128637334507 4 {M(Oxidation (M))|F}A{I|L}G{I|L}{I|L}K{I|L} 8 0 + 53.651 0.0 0.0 6.1416 6.1416 81.05 0.0 0.0 0.0 12.5190243216651 4.771212547196626 4.771212547196626 4.771212547196626 0 1.024227503252014 0.0 0.0 0.3054621874040891 + + {M(Oxidation (M))|F}A{I|L}G{I|L}{I|L}K{I|L};{M(Oxidation (M))|F}A{I|L}G{I|L}{I|L}{I|L}K 6.1416;5.5955 +;- + 99 + 1 1.948 70616.7 1.0 14205 5892 20097 HBL1_DMSO_200M_050219_2,20099 HBL1_DMSO_200M_050219_2,20099,FALGILKI True True FALGILKI 109.25067 437.791339099407 649132.625 20097.0 nc|ENSG00000135040|Q5VZE5-2|NAA35;;ENSG00000135040|ENST00000361671|NAA35 2.4094969630241394 2.0 True 8.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20101 109.27 800.0 85376.0 25 0 22211.0 -1 MIIPTLII 8 72 465.2889789854872 928.5634050377744 2 465.2888366580009 MULTI CID FTMS 0 0 0 20100 57677.26953125 0.3774290955176435 9 -0.1034088134765625 1 Oxidation (M) _M(Oxidation (M))IIPTLII_ ENSG00000130958|ENST00000253270|SLC35D2 30.19836241096484 0.408853459428176 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L} 4 -1 27.747 0.0 0.0 2.9882 0.0 0.0 0.0 439.2562361242983 439.2562361242983 8.49439772581654 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L} 2.9882 - 118 1 1.948 58163.3 0.8600000143051147 14206 5893 20100 HBL1_DMSO_200M_050219_2,20101 HBL1_DMSO_200M_050219_2,20101,MIIPTLII False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20106 109.3 800.0 272540.0 25 0 36610.0 + 22418 LPTETFIPVI 10 96 1129.649639751437 1128.642363284837 1 1129.649707019329 MULTI CID FTMS 0 0 0 20105 168843.78125 1.0 0 0.0 1 Unmodified _LPTETFIPVI_ ENSG00000119285|ENST00000366582|HEATR1 68.08070601005525 0.0189984391031388 4 [TP]ET{M(Oxidation (M))|F}{I|L}{I|L}PV{I|L} 10 2 + 93.053 0.0 0.0 8.2446 8.2446 85.365 0.0 0.0 0.0 9.259687322722812 44.727138826437326 9.259687322722812 3.564921830680703 0 0.805462187404089 0.0 2.385151878060192 0.0 [TP]ET{M(Oxidation (M))|F}{I|L}{I|L}PV{I|L};[TP]ET{I|L}{M(Oxidation (M))|F}{I|L}PV{I|L};[TP]E{I|L}T{M(Oxidation (M))|F}{I|L}PV{I|L};[TP]ET{I|L}{I|L}{M(Oxidation (M))|F}PV{I|L};[TP]ET{M(Oxidation (M))|F}{I|L}P{I|L}V{I|L};[TP]ET{M(Oxidation (M))|F}{I|L}PV{I|L}{I|L};[TP]ET{I|L}{M(Oxidation (M))|F}P{I|L}V{I|L};[TP]E{I|L}T{I|L}{M(Oxidation (M))|F}PV{I|L};[TP]ET{I|L}{M(Oxidation (M))|F}PV{I|L}{I|L};[TP]{I|L}ET{M(Oxidation (M))|F}{I|L}PV{I|L} 8.2446;7.9288;7.1455;6.9628;6.6918;6.4251;6.376;6.1795;6.1092;6.008 -;-;-;-;-;-;-;-;-;- 3981 1 1.948 137186.4 0.4000000059604645 14207 5897 20105 HBL1_DMSO_200M_050219_2,20106 HBL1_DMSO_200M_050219_2,20106,LPTETFIPVI True True LPTETFIPVI 109.29567 1129.64970701933 2357911.125 20105.0 ENSG00000119285|ENST00000366582|HEATR1 3.2473753293355307 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20107 109.31 800.0 119570.0 25 0 5794.5 + 10017 FPLQFIFFISI 11 93 686.3880856675019 1370.7616184018036 2 686.3884155154228 MULTI CID FTMS 0 0 0 20105 84005.0625 0.803388253127362 -27 0.2308197021484375 2 Unmodified _FPLQFIFFISI_ REV__nc|ENSG00000258806|Q8NGC8|OR11H7 23.78978130925829 0.5336113198261219 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[QP]{I|L}AKMV{I|L} 12 -1 + 92.341 0.0 0.0 6.7365 6.7365 85.853 0.0 0.0 0.0 7.18256871239447 15.10666445614629 7.18256871239447 7.18256871239447 0 2.455112052208703 2.0 0.4247425010840047 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[QP]{I|L}AKMV{I|L};[{I|L}P]QAKMVEP{M(Oxidation (M))|F}V{I|L};[{I|L}P]QAKMVE{I|L}MV{I|L};[{I|L}P]D[{I|L}V]MVNKMV{I|L};[{I|L}P]QAKMD{I|L}P{M(Oxidation (M))|F}V{I|L};[{I|L}P]QAKMD{I|L}{I|L}MV{I|L};[{I|L}P]{M(Oxidation (M))|F}D[QP]{I|L}AKMV{I|L};[{I|L}P]D[{I|L}V]MVE{I|L}MV{I|L};[{I|L}P]D{M(Oxidation (M))|F}[QP]{I|L}AKMV{I|L};[{I|L}P][AG]AKMVEP{M(Oxidation (M))|F}V{I|L} 6.7365;6.2125;6.1771;6.0576;5.8997;5.8644;5.7119;5.6868;5.6537;5.5487 -;-;-;-;-;-;-;-;-;- 6280 1 1.948 75355.9 0.3199999928474426 14208 5897 20105 HBL1_DMSO_200M_050219_2,20107 HBL1_DMSO_200M_050219_2,20107,FPLQFIFFISI False False False False reverse PXD020620_cell_line HBL1_DMSO_200M_050219_2 20109 109.33 800.0 84123.0 25 0 10617.0 + 18224 KVFELDLVTL 10 96 588.84741074342 1175.68026855364 2 589.3490478396416 MULTI CID FTMS 0 0 0 20108 75132.84375 0.1503958174810755 28 -0.2132797241210937 1 Unmodified _KVFELDLVTL_ ENSG00000117724|ENST00000366955|CENPF 26.020703789607367 0.3840598856887971 4 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}KD{I|L}VT{I|L} 10 4 + 50.583 0.0 0.0 4.3025 4.3025 49.796 0.0 0.0 0.0 8.750612633917001 8.908103009885764 8.750612633917001 0.0 0 0.8182503180159344 1.3010299956639813 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}KD{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}K{I|L}D{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EVK{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}KD{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}VK{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}DK{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E{I|L}VKVT{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}{I|L}VKVT{I|L};[{M(Oxidation (M))|F}E]VK{I|L}D{I|L}VT{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}DK{I|L}VT{I|L} 4.3025;4.3025;4.0464;4.0464;3.9402;3.7904;3.7226;3.6163;3.5582;3.5343 -;-;-;-;-;-;-;-;-;- 1189 1 1.948 60114.2 0.8199999928474426 14209 5898 20108 HBL1_DMSO_200M_050219_2,20109 HBL1_DMSO_200M_050219_2,20109,KVFELDLVTL False True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20111 109.33 183.0 356560.0 25 0 76943.0 + 13694 HQILTPFLL 9 65 541.3238773781221 1080.633201823044 2 541.3240844607353 MULTI CID FTMS 0 0 0 20110 292749.15625 0.6666909346282319 4 -0.0321273803710937 1 Unmodified _HQILTPFLL_ chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS 46.020951573049366 0.0490941689151868 4 [HQ]{I|L}{I|L}M{I|L}T{I|L}{I|L} 9 3 + 50.596 0.0 0.0 4.682 4.682 68.681 0.0 0.0 0.0 10.202264589233394 23.94016261540408 10.202264589233394 1.2248627423174696 0 0.7429928190999391 0.0 0.4247425010840047 0.3054621874040891 [HQ]{I|L}{I|L}M{I|L}T{I|L}{I|L};[HQ]{I|L}{I|L}T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[HQ]{I|L}T{I|L}{I|L};[HQ]{I|L}[VP][YV]{I|L}{I|L};[HQ][VP]{I|L}[YV]{I|L}{I|L} 4.682;4.5687;3.3534;1.6544;1.2129 -;+;-;-;- + 131 1 1.948 57052.8 1.0 14210 5899 20110 HBL1_DMSO_200M_050219_2,20111 HBL1_DMSO_200M_050219_2,20111,HQILTPFLL True True HQILTPFLL 109.33196 541.324084460735 6757514.0 20110.0 chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;;nc|ENSG00000119969|Q9NRZ9-3|HELLS;;nc|ENSG00000119969|Q9NRZ9-2|HELLS;;ENSG00000119969|ENST00000348459|HELLS;;nc|ENSG00000119969|Q9NRZ9-4|HELLS 7.481336911519368 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20112 109.34 733.0 171410.0 25 0 14595.0 + 33537 SILETITSL 9 86 976.555507503635 975.548231037035 1 976.5561401247978 MULTI CID FTMS 0 0 0 20110 124026.125 0.9631527873037676 -9 0.1115341186523437 2 Unmodified _SILETITSL_ ENSG00000038219|ENST00000040738|BOD1L1 136.33342141710068 0.015683453262119 4 {[QN]|[E{I|L}]|[KN]}TVT{I|L}TS{I|L} 9 3 + 89.751 0.0 0.0 9.2001 9.2001 83.818 0.0 0.0 0.0 2.118931647855291 14.09256854528806 2.118931647855291 2.118931647855291 0 0.9731975075880328 1.5228787452803376 2.75 0.0 {[QN]|[E{I|L}]|[KN]}TVT{I|L}TS{I|L};{[TV]|[{I|L}S]}{I|L}ET{I|L}TS{I|L};{[QN]|[E{I|L}]|[KN]}TVTT{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}T{I|L}S{I|L}TS{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}ST{I|L}TS{I|L};{[TV]|[{I|L}S]}{I|L}ETT{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}TTV{I|L}TS{I|L};{[TV]|[{I|L}S]}{I|L}TE{I|L}TS{I|L};{[QN]|[E{I|L}]|[KN]}T{I|L}TVTS{I|L};{[QN]|[E{I|L}]|[KN]}TT{I|L}VTS{I|L} 9.2001;8.9829;8.2509;8.1547;8.0704;8.0337;7.9656;7.961;7.6827;7.4937 -;+;-;-;-;-;-;-;-;- + 4483 1 1.948 90297.3 1.0 14211 5899 20110 HBL1_DMSO_200M_050219_2,20112 HBL1_DMSO_200M_050219_2,20112,SILETITSL True True SILETITSL 109.34471 976.556140124798 949680.0625 20110.0 ENSG00000038219|ENST00000040738|BOD1L1 4.911550998687744 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20114 109.35 58.0 962550.0 25 0 168800.0 + 41581 VPPEWVPII 9 60 525.3049230647356 1048.595293196271 2 525.3052856326103 MULTI CID FTMS 0 0 0 20113 751171.4375 0.3864798365373033 -36 0.3557510375976562 1 Unmodified _VPPEWVPII_ ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 36.04419817259434 0.0971720506436186 4 [{I|L}P][DP]WVP{I|L}{I|L} 9 2 + 52.113 0.0 0.0 4.9698 4.9698 52.33 0.0 0.0 0.0 5.228787452803374 20.457574905606748 5.228787452803374 0.0 0 1.1989700043360187 2.0 0.0 0.0 [{I|L}P][DP]WVP{I|L}{I|L};[{I|L}P][WD]PVP{I|L}{I|L};[EP]WPVVP{I|L}{I|L};[{I|L}P][DP]W[{I|L}P]V{I|L};[{I|L}P][WD]P[{I|L}P]V{I|L};[EP]WVPVP{I|L}{I|L};[EP]PWVVP{I|L}{I|L};{[HG]|PP}EWVVP{I|L}{I|L};[VP][EP]WVP{I|L}{I|L};[VP][WE]PVP{I|L}{I|L} 4.9698;4.9698;4.4711;4.2314;4.2314;4.1841;4.1841;4.1086;3.9959;3.9959 -;-;-;-;-;-;-;-;+;- + 207 1 1.948 54802.1 1.0 14212 5900 20113 HBL1_DMSO_200M_050219_2,20114 HBL1_DMSO_200M_050219_2,20114,VPPEWVPII True True VPPEWVPII 109.35005 525.30528563261 120452328.0 20113.0 nc|ENSG00000204463|P46379-5|BAG6;;nc|ENSG00000204463|P46379-2|BAG6;;nc|ENSG00000204463|P46379|BAG6;;ENSG00000204463|ENST00000676615|BAG6 6.14841890335083 2.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20121 109.39 800.0 92693.0 25 0 7759.3 -1 0 85 724.8404770369258 2895.332802281303 4 725.0919067263603 MULTI CID FTMS 0 0 0 20120 51188.203125 0.1529324392417008 53 -0.43109130859375 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 57.089 0.0 0.0 1.9717 0.0 0.0 0.0 1854.722252416621 1854.722252416621 19.84275782067301 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.9717 - 509 1 1.948 64554.4 0.9100000262260436 14213 5906 20120 HBL1_DMSO_200M_050219_2,20121 HBL1_DMSO_200M_050219_2,20121, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20127 109.41 529.0 191410.0 25 0 17372.0 -1 0 89 966.1182774461116 2895.333002938535 3 966.4531127810478 MULTI CID FTMS 0 0 0 20126 218509.625 0.1961911414622846 60 -0.5010757446289062 1 4 [YQ]{I|L}ENY 6 -1 59.552 0.0 0.0 2.0568 0.0 0.0 0.0 2081.9530032173743 2081.9530032173743 0.1613604679733882 0.0 0.0 0.0 0 0.8807196863200843 0.958607314841775 0.4247425010840047 0.8494850021680094 [YQ]{I|L}ENY 2.0568 - 564 + 1 1.948 74818.7 1.0 14214 5911 20126 HBL1_DMSO_200M_050219_2,20127 HBL1_DMSO_200M_050219_2,20127, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20128 109.43 800.0 175700.0 25 0 16525.0 + 42668 VTVQSLLTV 9 97 959.5764681382826 958.5691916716826 1 959.5787231326104 MULTI CID FTMS 0 0 0 20126 101505.7890625 0.636265672388487 -11 0.0579147338867187 2 Unmodified _VTVQSLLTV_ ENSG00000182578|ENST00000675795|CSF1R 118.89474601620944 0.0019711750475752 4 {[TV]|[{I|L}S]}N{I|L}S{I|L}{I|L}TV 9 2 + 114.28 0.0 0.0 11.922 11.922 85.502 0.0 0.0 0.0 18.239087409443187 14.973024840566469 14.973024840566469 2.768024924119672 0 0.6861818737241735 1.5228787452803376 2.392159058960253 1.9674165578762488 {[TV]|[{I|L}S]}N{I|L}S{I|L}{I|L}TV;{[TV]|[{I|L}S]}{I|L}NS{I|L}{I|L}TV;{[TV]|[{I|L}S]}N{I|L}{I|L}S{I|L}TV;{[TV]|[{I|L}S]}{I|L}N{I|L}S{I|L}TV;{[TV]|[{I|L}S]}N{I|L}S{I|L}T{I|L}V;{[TV]|[{I|L}S]}{I|L}SN{I|L}{I|L}TV;{[TV]|[{I|L}S]}NS{I|L}{I|L}{I|L}TV;{[TV]|[{I|L}S]}N{I|L}TV{I|L}TV;{[TV]|[{I|L}S]}{I|L}NS{I|L}T{I|L}V;{[TV]|[{I|L}S]}{I|L}NTV{I|L}TV 11.922;11.633;11.388;11.099;10.642;10.525;10.484;10.433;10.353;10.144 -;-;-;-;-;-;-;-;-;- 2031 1 1.948 95096.8 0.3899999856948852 14215 5911 20126 HBL1_DMSO_200M_050219_2,20128 HBL1_DMSO_200M_050219_2,20128,VTVQSLLTV True True SIISNLITV 109.42835 959.57872313261 1104794.5 20126.0 ENSG00000132953|ENST00000255305|XPO4 4.556545734405518 1.0 False 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20130 109.45 800.0 146840.0 25 0 22177.0 + 42780 VVINFDFPKL 10 84 596.3422221212371 1190.669891309274 2 596.3425170779228 MULTI CID FTMS 0 0 0 20129 128127.3515625 0.5801869441230086 16 -0.1426162719726562 1 Unmodified _VVINFDFPKL_ ENSG00000110367|ENST00000534980|DDX6 51.41523569358685 0.0718446036348414 4 VV{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F}P[K{I|L}] 10 0 + 104.0 0.0 0.0 8.7348 8.7348 91.833 0.0 0.0 0.0 77.9632400568278 7.824609153403514 7.824609153403514 9.049471895720984 0 1.274227503252014 2.0 0.0 1.0114393726401687 + + VV{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F}P[K{I|L}];VV{I|L}N{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}[KP];VV{I|L}GG{M(Oxidation (M))|F}D{M(Oxidation (M))|F}P[K{I|L}];VV{I|L}GG{M(Oxidation (M))|F}D{M(Oxidation (M))|F}{I|L}[KP] 8.7348;7.9748;7.9651;7.2051 +;-;-;- + 280 + 1 1.948 92677.6 0.9800000190734864 14216 5912 20129 HBL1_DMSO_200M_050219_2,20130 HBL1_DMSO_200M_050219_2,20130,VVINFDFPKL True True VVINFDFPKL 109.44605 596.342517077923 3594510.75 20129.0 ENSG00000110367|ENST00000534980|DDX6 7.048016548156738 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20134 109.47 795.0 132550.0 25 0 13254.0 + 22556 LPWQIVQI 8 91 498.7977152516675 995.580877570135 2 498.7972595095634 MULTI CID FTMS 0 0 0 20133 97874.4140625 0.4824773558172413 -16 0.1281967163085937 1 Unmodified _LPWQIVQI_ ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF;ENST00000540987.1_1_12:133225370-133225942:-|nuORF 59.79521254764295 0.1151759508933577 4 [WP]Q{I|L}{I|L}VQ{I|L} 8 2 + 53.141 0.0 0.0 5.3377 5.3377 70.999 0.0 0.0 0.0 0.9691001300805624 7.742275032520141 0.9691001300805624 0.9691001300805624 0 0.6989700043360187 1.0969100130080565 0.0 0.5796896906561032 [WP]Q{I|L}{I|L}VQ{I|L};[{I|L}P]WQ{I|L}VQ{I|L};[WP]{I|L}Q{I|L}VQ{I|L};[AG]WP{I|L}{I|L}VQ{I|L};[AG]{I|L}WP{I|L}VQ{I|L};[WP]Q{I|L}V{I|L}Q{I|L};[{I|L}P]WQV{I|L}Q{I|L};[WQ]P{I|L}{I|L}VQ{I|L};[Q{I|L}]WP{I|L}VQ{I|L};[WP]{I|L}QV{I|L}Q{I|L} 5.3377;5.2404;5.0353;4.8296;4.8296;4.8271;4.7298;4.6125;4.6021;4.5247 -;+;-;-;-;-;-;-;-;- + 771 1 1.948 85209.3 1.0 14217 5915 20133 HBL1_DMSO_200M_050219_2,20134 HBL1_DMSO_200M_050219_2,20134,LPWQIVQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20140 109.5 800.0 95169.0 25 0 23723.0 + -1 VQVEDIVFL 9 81 531.2966048750524 530.2893284084523 1 531.2974731326103 MULTI CID FTMS 0 0 0 20139 84936.4765625 0.696480450713869 -20 0.1417312622070312 1 ENSG00000197780|ENST00000338366|TAF13 4 {[QV]|[N{I|L}]|[RA]|[KV]}ER 4 -1 + 37.497 0.0 0.0 7.071 7.071 75.972 0.0 0.0 0.0 7.429155219028949 -0.9074314547119328 -0.9074314547119328 0.0443219174010778 0 0.0 1.0457574905606752 0.0 0.6861818737241735 {[QV]|[N{I|L}]|[RA]|[KV]}ER;{[QV]|[N{I|L}]|[RA]|[KV]}VW;[{I|L}V]NW;VVQW;[{I|L}V]GGW;VV[AG]W 7.071;7.0626;2.9052;2.272;1.0723;0.43909 -;-;-;-;-;- 137 1 1.948 64214.2 0.3499999940395355 14218 5920 20139 HBL1_DMSO_200M_050219_2,20140 HBL1_DMSO_200M_050219_2,20140, False False VQVEDIVFL 109.50281 531.29747313261 2350729.3125 20139.0 ENSG00000197780|ENST00000338366|TAF13 4.987182140350342 2.0 False 9.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20148 109.54 800.0 35430.0 25 0 9973.9 -1 0 30 1103.3698012564937 0 1103.191332995892 PEAK CID FTMS 0 0 0 20147 18312.294921875 1.0 0 0.0 1 4 EV 2 -1 4.6927 0.0 0.0 0.21285 0.0 0.0 1726.4688067592776 247.12038599185783 1973.589192751136 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EV 0.21285 - 7 + 1 1.948 28837.4 0.3499999940395355 14219 5927 20147 HBL1_DMSO_200M_050219_2,20148 HBL1_DMSO_200M_050219_2,20148, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20149 109.56 800.0 29167.0 25 0 8570.4 -1 LYKCNECS 8 36 1073.4374967806534 1072.4302203140537 1 1073.896777331829 MULTI CID FTMS 0 0 0 20147 9852.4765625 0.3997200317622745 1 -0.0441207885742187 2 2 Carbamidomethyl (C) _LYKC(Carbamidomethyl (C))NEC(Carbamidomethyl (C))S_ ENSG00000198633|ENST00000433050|ZNF534;nc|ENSG00000198633|Q76KX8|ZNF534 0.7936320650641473 0.8195151834710337 4 {I|L} 1 -1 6.9897 0.0 0.0 0.65176 0.0 0.0 348.9923673861222 607.3276461236936 956.320013509816 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.65176 + + 3 + 1 1.948 28993.8 0.4000000059604645 14220 5927 20147 HBL1_DMSO_200M_050219_2,20149 HBL1_DMSO_200M_050219_2,20149,LYKCNECS False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20150 109.57 800.0 121320.0 25 0 14628.0 -1 LTSCFVTFL 9 76 544.2782382659504 1086.5419235987008 2 544.2781860232353 MULTI CID FTMS 0 0 0 20147 110369.7109375 0.8420762537541484 -20 0.1403045654296875 3 Carbamidomethyl (C) _LTSC(Carbamidomethyl (C))FVTFL_ ENSG00000176340|ENST00000314133|COX8A 21.74664581756881 0.2544899275067181 4 VPPE 4 -1 36.261 0.0 0.0 3.3373 0.0 0.0 0.0 661.3064058893186 661.3064058893186 4.0270406916686525 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.3252574989159953 0.0 VPPE 3.3373 - 75 + 1 1.948 83667.3 0.3899999856948852 14221 5927 20147 HBL1_DMSO_200M_050219_2,20150 HBL1_DMSO_200M_050219_2,20150,LTSCFVTFL False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20152 109.59 800.0 67115.0 25 0 6230.9 + 33502 SIISNLITV 9 87 480.2920990458773 958.5696451585544 2 480.2920104861259 MULTI CID FTMS 0 0 0 20151 54638.16015625 0.5795456485295666 1 -0.0268630981445312 1 Unmodified _SIISNLITV_ ENSG00000132953|ENST00000255305|XPO4 37.97399986684836 0.0865783450051559 4 {[TV]|[{I|L}S]}N{I|L}S{I|L} 6 5 49.2 0.0 0.0 5.1326 0.0 0.0 0.0 328.18583103185455 328.18583103185455 28.525684359364405 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.7059771852360797 0.0 {[TV]|[{I|L}S]}N{I|L}S{I|L} 5.1326 - 357 1 1.948 47238.8 0.3499999940395355 14222 5928 20151 HBL1_DMSO_200M_050219_2,20152 HBL1_DMSO_200M_050219_2,20152,SIISNLITV True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20153 109.6 599.0 133180.0 25 0 8917.7 + 37048 TGFPSLITI 9 87 948.5370961477352 947.5298196811352 1 948.537158191204 MULTI CID FTMS 0 0 0 20151 97536.8046875 0.7314043534710377 -7 0.0681686401367187 2 Unmodified _TGFPSLITI_ ENSG00000107758|ENST00000360663|PPP3CB;ENSG00000120910|ENST00000240139|PPP3CC;ENSG00000138814|ENST00000394854|PPP3CA;ENST00000495897.2_1_10:75227245-75231333:-|nuORF;nc|ENSG00000107758|P16298-2|PPP3CB;nc|ENSG00000107758|P16298-3|PPP3CB;nc|ENSG00000107758|P16298-4|PPP3CB;nc|ENSG00000120910|P48454-2|PPP3CC;nc|ENSG00000120910|P48454-3|PPP3CC;nc|ENSG00000138814|Q08209-2|PPP3CA;nc|ENSG00000138814|Q08209-3|PPP3CA;nc|ENSG00000138814|Q08209-5|PPP3CA 61.357469665136826 0.0253304979873734 4 [PS]{I|L}G{M(Oxidation (M))|F}T{I|L}T{I|L} 9 6 + 69.051 0.0 0.0 7.2875 7.2875 85.918 0.0 0.0 0.0 15.999161495794423 48.077053078093215 15.999161495794423 5.669015600442577 0 0.0 0.0 2.221848749616356 0.0 [PS]{I|L}G{M(Oxidation (M))|F}T{I|L}T{I|L};[PS]{I|L}GT{M(Oxidation (M))|F}{I|L}T{I|L};[PS]{I|L}{I|L}TG{M(Oxidation (M))|F}T{I|L};[PS]{I|L}G{M(Oxidation (M))|F}{I|L}TT{I|L};[PS]{I|L}GT{I|L}{M(Oxidation (M))|F}T{I|L};[PS]{I|L}{I|L}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[SA]|[TG]}VT{I|L}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[SA]|[TG]}S{I|L}{I|L}T{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[SA]|[TG]}V{I|L}TT{I|L};[PS]{I|L}[VP]WH{I|L} 7.2875;6.6892;6.3009;6.0645;5.3955;4.8167;4.4868;4.1194;3.2638;3.1059 -;-;-;-;-;-;-;-;-;- 739 1 1.948 60653.8 1.0 14223 5928 20151 HBL1_DMSO_200M_050219_2,20153 HBL1_DMSO_200M_050219_2,20153,TGFPSLITI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20156 109.61 27.0 2157200.0 25 0 330780.0 + 41582 VPPEWVPII 9 63 525.3049230647356 1048.595293196271 2 525.3053466677666 MULTI CID FTMS 0 0 0 20155 1680188.75 0.8644618805168772 -6 0.087066650390625 1 Unmodified _VPPEWVPII_ ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 42.09456458481378 0.0639583784996157 4 [{I|L}P][DP]WVP{I|L}{I|L} 9 2 + 68.606 0.0 0.0 6.5427 6.5427 58.777 0.0 0.0 0.0 6.020599913279625 16.478174818886373 6.020599913279625 0.0 0 1.274227503252014 2.0 0.0 0.0 [{I|L}P][DP]WVP{I|L}{I|L};[{I|L}P][WD]PVP{I|L}{I|L};[EP]WPVVP{I|L}{I|L};[EP]PWVVP{I|L}{I|L};[EP]WVPVP{I|L}{I|L};[VP][WE]PVP{I|L}{I|L};[VP][EP]WVP{I|L}{I|L};[EP]PVWVP{I|L}{I|L};[{I|L}P][WD]P[{I|L}P]V{I|L};[{I|L}P][DP]W[{I|L}P]V{I|L} 6.5427;6.5427;5.9685;5.6814;5.6814;5.4496;5.4496;5.3943;3.9444;3.9444 -;-;-;-;-;-;+;-;-;- + 245 1 1.948 58523.1 1.0 14224 5930 20155 HBL1_DMSO_200M_050219_2,20156 HBL1_DMSO_200M_050219_2,20156,VPPEWVPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20157 109.62 800.0 93786.0 25 0 11112.0 41348 VPIYAAYKF 9 79 536.2960361432739 1070.5775193533475 2 536.2955810427666 MULTI CID FTMS 0 0 0 20155 91823.296875 0.7875472543147516 -7 0.09112548828125 2 Unmodified _VPIYAAYKF_ ENSG00000142319|ENST00000270349|SLC6A3 16.942295170755138 0.3780752226737986 4 VPPE[W{I|L}]YT 8 6 53.862 0.0 0.0 5.0311 0.0 0.0 0.0 82.06692682437733 82.06692682437733 38.61256243562898 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5 0.0 VPPE[W{I|L}]YT 5.0311 - 124 + 1 1.948 71642.4 0.8199999928474426 14225 5930 20155 HBL1_DMSO_200M_050219_2,20157 HBL1_DMSO_200M_050219_2,20157,VPIYAAYKF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20160 109.64 800.0 105460.0 25 0 5324.8 + + 44197 FPLDPQLAKMVI 12 100 686.3880856675019 1370.7616184018036 2 686.3886596560478 MULTI CID FTMS 0 0 0 20159 99862.5390625 0.9550423322437838 8 -0.0569686889648437 1 Unmodified _YLFVWGIVYVL_ ENSG00000109606|ENST00000336812|DHX15;ENST00000503562.1_1_4:24541777-24541846:-|nuORF;ENST00000503562.1_1_4:24541566-24543501:-|nuORF 15.847184025352805 0.7055071256943262 4 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VNKMV{I|L} 12 -1 + 79.329 0.0 0.0 5.7872 5.7872 79.024 0.0 0.0 0.0 6.262874945799752 6.259308061610767 6.259308061610767 4.300398258514889 0 1.926935982160881 1.6989700043360187 0.9247425010840048 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VNKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[QP]{I|L}AKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]AAAKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VE{I|L}MV{I|L};[{I|L}P]D{M(Oxidation (M))|F}[VP]VNKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]D{I|L}{I|L}MV{I|L};[{I|L}P]{M(Oxidation (M))|F}D[VP]VNKMV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}D[VP]VGGKMV{I|L};[{I|L}P]QAKMVE{I|L}MV{I|L};[{I|L}P]D{M(Oxidation (M))|F}[QP]{I|L}AKMV{I|L} 5.7872;5.4735;5.4189;5.4164;5.3303;5.2144;5.1284;5.1235;5.0488;5.0166 -;-;-;-;-;-;-;-;-;- 8269 1 1.948 67178.0 0.3199999928474426 14226 5932 20159 HBL1_DMSO_200M_050219_2,20160 HBL1_DMSO_200M_050219_2,20160,YLFVWGIVYVL False False FPLDPQLAKMVI 109.64117 686.388659656048 31241136.0 20159.0 ENSG00000109606|ENST00000336812|DHX15;;ENST00000503562.1_1_4:24541777-24541846:-|nuORF;;ENST00000503562.1_1_4:24541566-24543501:-|nuORF 5.821920394897461 2.0 False 12.0 True self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20166 109.67 800.0 90483.0 25 0 9061.0 -1 0 80 966.1182774461116 2895.333002938535 3 966.4530517458916 MULTI CID FTMS 0 0 0 20165 110441.921875 0.0991614292411362 86 1 4 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 54.563 0.0 0.0 1.8845 0.0 0.0 0.0 1854.722810444432 1854.722810444432 20.349490893123843 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.8845 - 387 1 1.948 56040.0 0.7799999713897705 14227 5937 20165 HBL1_DMSO_200M_050219_2,20166 HBL1_DMSO_200M_050219_2,20166, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20170 109.7 753.0 226440.0 25 0 18092.0 + 42052 VQVEDIVFL 9 103 1061.5868763291426 1060.5795998625426 1 1061.586596667767 MULTI CID FTMS 0 0 0 20169 111958.9296875 0.6237788084466328 5 -0.0393218994140625 1 Unmodified _VQVEDIVFL_ ENSG00000197780|ENST00000338366|TAF13 78.7280429016045 0.0178249292250809 4 {[QV]|[N{I|L}]|[RA]|[KV]}EDV{I|L}V{M(Oxidation (M))|F}{I|L} 9 2 + 95.447 0.0 0.0 8.9995 8.9995 83.53 0.0 0.0 0.0 2.04119982655925 16.478174818886373 2.04119982655925 2.04119982655925 0 0.3807196863200844 1.0 1.7416440611282626 1.2619229975844686 {[QV]|[N{I|L}]|[RA]|[KV]}EDV{I|L}V{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QDV{I|L}V{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}ED{I|L}VV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}EVN{I|L}V{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VED{I|L}V{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EVD{I|L}V{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}ENV{I|L}V{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QD{I|L}VV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}EVQVV{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QVD{I|L}V{M(Oxidation (M))|F}{I|L} 8.9995;8.807;8.7733;8.7356;8.6695;8.6442;8.641;8.5808;8.5094;8.4518 -;-;-;-;+;-;-;-;-;- + 12237 1 1.948 108941.8 1.0 14228 5940 20169 HBL1_DMSO_200M_050219_2,20170 HBL1_DMSO_200M_050219_2,20170,VQVEDIVFL True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20174 109.72 519.0 156530.0 25 0 17797.0 + 22557 LPWQIVQI 8 88 498.7977152516675 995.580877570135 2 498.7976867556572 MULTI CID FTMS 0 0 0 20173 125180.4609375 0.6170840292800192 12 -0.0673599243164062 1 Unmodified _LPWQIVQI_ ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF;ENST00000540987.1_1_12:133225370-133225942:-|nuORF 59.79521254764295 0.1151759508933577 4 [WP]Q{I|L}{I|L}VQ{I|L} 8 2 + 58.083 0.0 0.0 5.8341 5.8341 83.272 0.0 0.0 0.0 9.208187539523747 10.172203223519531 9.208187539523747 8.26606256887672 0 0.6237125054200234 1.0969100130080565 0.0 1.024227503252014 [WP]Q{I|L}{I|L}VQ{I|L};[WP]Q{I|L}V{I|L}Q{I|L};[Q{I|L}]WP{I|L}VQ{I|L};[AG]{I|L}WP{I|L}VQ{I|L};[WQ]P{I|L}{I|L}VQ{I|L};[AG]WP{I|L}{I|L}VQ{I|L};[{I|L}P][WQ]{I|L}VQ{I|L};[WQ]{I|L}P{I|L}VQ{I|L};[AG]{I|L}WPV{I|L}Q{I|L};[AG]W{I|L}P{I|L}VQ{I|L} 5.8341;5.0038;4.9092;4.8893;4.7323;4.7124;4.43;4.43;4.41;4.41 -;-;-;-;-;-;+;-;-;- + 341 1 1.948 67284.6 1.0 14229 5943 20173 HBL1_DMSO_200M_050219_2,20174 HBL1_DMSO_200M_050219_2,20174,LPWQIVQI True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20185 109.77 749.0 236820.0 25 0 16911.0 + 10205 FQIGDYLDI 9 117 1083.5341417315997 1082.5268652649995 1 1083.535449206829 MULTI CID FTMS 0 0 0 20184 160787.703125 1.0 0 0.0 1 Unmodified _FQIGDYLDI_ ENSG00000150459|ENST00000382533|SAP18;ENST00000467636.1_2_13:21721026-21721478:+|nuORF;nc|ENSG00000150459|O00422|SAP18 160.51597146486608 0.0010047773005512 4 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}GDY{I|L}D{I|L} 9 0 + 83.417 0.0 0.0 7.7057 7.7057 78.522 0.0 0.0 0.0 0.5224372379799433 16.478174818886387 0.5224372379799433 0.5224372379799433 0 1.3539171939081172 0.0 1.2887254899964358 1.9188265215345564 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}GDY{I|L}D{I|L};[Y{I|L}]DGQ{M(Oxidation (M))|F}{I|L}D{I|L};[Y{I|L}]DG{M(Oxidation (M))|F}Q{I|L}D{I|L};{[YD]|[{M(Oxidation (M))|F}M]}G{I|L}Q{M(Oxidation (M))|F}{I|L}D{I|L};{[YD]|[{M(Oxidation (M))|F}M]}G{I|L}{M(Oxidation (M))|F}Q{I|L}D{I|L};[Y{I|L}]DG{I|L}Q{M(Oxidation (M))|F}D{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}GDYD{I|L}{I|L};[Y{I|L}]DGQ{M(Oxidation (M))|F}D{I|L}{I|L};[Y{I|L}]DGQ{I|L}{M(Oxidation (M))|F}D{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}GQ{M(Oxidation (M))|F}{I|L}D{I|L} 7.7057;7.6575;7.4737;6.6019;6.4181;6.3999;6.3265;6.2782;6.2161;6.1612 +;-;-;-;-;-;-;-;-;- + 6494 1 1.948 116865.6 1.0 14230 5953 20184 HBL1_DMSO_200M_050219_2,20185 HBL1_DMSO_200M_050219_2,20185,FQIGDYLDI True True FQIGDYLDI 109.76881 1083.53544920683 1504310.125 20184.0 ENSG00000150459|ENST00000382533|SAP18;;nc|ENSG00000150459|O00422|SAP18;;ENST00000467636.1_2_13:21721026-21721478:+|nuORF 5.8676438331604 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20189 109.79 800.0 119060.0 25 0 15673.0 + 44244 YLIPDIDLKL 10 75 601.8552400332841 1201.695927133368 2 601.8560058474541 MULTI CID FTMS 0 0 0 20188 53076.359375 0.1820740256035576 -20 0.1235733032226562 1 Unmodified _YLIPDIDLKL_ ENSG00000173473|ENST00000254480|SMARCC1 28.181266145913348 0.3355154477840527 4 [Y{I|L}]{I|L}PD{I|L}D{I|L}K{I|L} 10 0 + 64.963 0.0 0.0 5.406 5.406 84.337 0.0 0.0 0.0 17.740181612806936 8.538719643217618 8.538719643217618 9.776296993281406 0 1.2614393726401687 1.6989700043360187 0.4247425010840047 0.0 + + [Y{I|L}]{I|L}PD{I|L}D{I|L}K{I|L};[Y{I|L}]{I|L}{I|L}[DP]D{I|L}K{I|L} 5.406;4.5924 +;- + 284 + 1 1.948 74989.6 0.3199999928474426 14231 5956 20188 HBL1_DMSO_200M_050219_2,20189 HBL1_DMSO_200M_050219_2,20189,YLIPDIDLKL False True YLIPDIDLKL 109.79331 601.856005847454 2110452.5 20188.0 ENSG00000173473|ENST00000254480|SMARCC1 2.9937706788380942 2.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20196 109.83 800.0 155210.0 25 0 22116.0 41341 VPISDSDLEI 10 87 544.2782382659504 1086.5419235987008 2 544.2785522341728 MULTI CID FTMS 0 0 0 20195 85345.3359375 0.6511503939911213 15 1 Unmodified _VPISDSDLEI_ ENSG00000196678|ENST00000357967|ERI2;ENST00000568805.5_1_16:20809048-20811281:-|nuORF;nc|ENSG00000196678|A8K979-2|ERI2 14.838274106304384 0.5985701837916485 4 VP{I|L} 3 7 39.909 0.0 0.0 3.6731 0.0 0.0 0.0 774.3155001275999 774.3155001275999 2.4350126370841707 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + VP{I|L} 3.6731 + + 170 + 1 1.948 102729.8 0.3400000035762787 14232 5962 20195 HBL1_DMSO_200M_050219_2,20196 HBL1_DMSO_200M_050219_2,20196,VPISDSDLEI False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20200 109.86 800.0 115790.0 25 0 9745.2 + 37049 TGFPSLITI 9 92 948.5370961477352 947.5298196811352 1 948.5407592654228 MULTI CID FTMS 0 0 0 20199 67971.515625 0.5097015695709062 30 1 Unmodified _TGFPSLITI_ ENSG00000107758|ENST00000360663|PPP3CB;ENSG00000120910|ENST00000240139|PPP3CC;ENSG00000138814|ENST00000394854|PPP3CA;ENST00000495897.2_1_10:75227245-75231333:-|nuORF;nc|ENSG00000107758|P16298-2|PPP3CB;nc|ENSG00000107758|P16298-3|PPP3CB;nc|ENSG00000107758|P16298-4|PPP3CB;nc|ENSG00000120910|P48454-2|PPP3CC;nc|ENSG00000120910|P48454-3|PPP3CC;nc|ENSG00000138814|Q08209-2|PPP3CA;nc|ENSG00000138814|Q08209-3|PPP3CA;nc|ENSG00000138814|Q08209-5|PPP3CA 61.357469665136826 0.0253304979873734 4 {I|L}TG{M(Oxidation (M))|F}T{I|L} 6 5 47.141 0.0 0.0 4.9752 0.0 0.0 297.1690846173844 0.0 297.1690846173844 0.0 25.10492532673746 0.0 0.0 0 0.0 0.0 1.5994850021680094 0.0 {I|L}TG{M(Oxidation (M))|F}T{I|L} 4.9752 - 295 1 1.948 65378.5 0.3300000131130218 14233 5965 20199 HBL1_DMSO_200M_050219_2,20200 HBL1_DMSO_200M_050219_2,20200,TGFPSLITI True True TGFPSLITI 109.85571 948.540759265423 2078444.375 20199.0 nc|ENSG00000138814|Q08209-5|PPP3CA;;ENSG00000107758|ENST00000360663|PPP3CB;;nc|ENSG00000107758|P16298-2|PPP3CB;;ENSG00000138814|ENST00000394854|PPP3CA;;ENST00000495897.2_1_10:75227245-75231333:-|nuORF;;nc|ENSG00000120910|P48454-2|PPP3CC;;nc|ENSG00000138814|Q08209-3|PPP3CA;;nc|ENSG00000138814|Q08209-2|PPP3CA;;ENSG00000120910|ENST00000240139|PPP3CC;;nc|ENSG00000107758|P16298-3|PPP3CB;;nc|ENSG00000120910|P48454-3|PPP3CC;;nc|ENSG00000107758|P16298-4|PPP3CB 5.369235197703044 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20203 109.86 32.0 1969300.0 25 0 313050.0 + 41583 VPPEWVPII 9 56 525.3049230647356 1048.595293196271 2 525.3052856326103 MULTI CID FTMS 0 0 0 20202 1429245.125 0.7353506732366106 31 1 Unmodified _VPPEWVPII_ ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6 53.57557251787612 0.0325303259649373 4 [{I|L}P][DP]WVP{I|L}{I|L} 9 2 + 55.168 0.0 0.0 5.2611 5.2611 53.65 0.0 0.0 0.0 10.969100130080562 15.897803053245951 10.969100130080562 0.0 0 0.7429928190999391 2.0 0.7614393726401688 0.0 [{I|L}P][DP]WVP{I|L}{I|L};[{I|L}P][WD]PVP{I|L}{I|L};[VP][WE]PVP{I|L}{I|L};[VP][EP]WVP{I|L}{I|L};[{I|L}P][WD]P[{I|L}P]V{I|L};[{I|L}P][DP]W[{I|L}P]V{I|L};[VP][WE]P[{I|L}P]V{I|L};[VP][EP]W[{I|L}P]V{I|L} 5.2611;5.2611;4.215;4.215;4.1895;4.1895;3.1434;3.1434 -;-;-;+;-;-;-;- + 117 1 1.948 63773.6 1.0 14234 5967 20202 HBL1_DMSO_200M_050219_2,20203 HBL1_DMSO_200M_050219_2,20203,VPPEWVPII True True False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20204 109.88 800.0 165770.0 25 0 23721.0 + 32552 SAPTLFPLV 9 96 472.7761442475148 943.5377355618295 2 472.7758361697197 MULTI CID FTMS 0 0 0 20202 90777.5078125 0.2285176491337762 -8 0.0583267211914062 2 Unmodified _SAPTLFPLV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 63.562846038646086 0.0241094678104353 4 [{I|L}P]T{M(Oxidation (M))|F}P{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 5 + 59.333 0.0 0.0 6.2883 6.2883 84.706 0.0 0.0 0.0 13.580851739299275 6.989700043360188 6.989700043360188 7.786596949921218 0 0.0 1.6989700043360187 0.9947026752325154 0.0 [{I|L}P]T{M(Oxidation (M))|F}P{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]{M(Oxidation (M))|F}TP{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]TP{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[TP]{I|L}{M(Oxidation (M))|F}P{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]TP{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TP{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[TP]{I|L}P{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]TAS[KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[SA]|[TG]}[KA]TP{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[TP]{I|L}P{I|L}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 6.2883;5.463;5.2415;4.8489;4.6817;4.1456;3.8021;3.7547;3.6567;3.2424 -;-;-;-;-;-;-;-;-;- 523 1 1.948 102972.8 0.3600000143051147 14235 5967 20202 HBL1_DMSO_200M_050219_2,20204 HBL1_DMSO_200M_050219_2,20204,SAPTLFPLV True True SAPTLFPLV 109.8782 472.77583616972 2673131.75 20202.0 nc|ENSG00000211899|P01871-1|IGHM;;nc|ENSG00000211899|P01871|IGHM 1.1678573787212372 2.0 True 9.0 False nc_isoform PXD020620_cell_line HBL1_DMSO_200M_050219_2 20205 109.89 798.0 100460.0 25 0 13697.0 41349 VPIYAAYKF 9 85 536.2960361432739 1070.5775193533475 2 536.2957031130791 MULTI CID FTMS 0 0 0 20202 94487.046875 0.8103936241367448 30 3 Unmodified _VPIYAAYKF_ ENSG00000142319|ENST00000270349|SLC6A3 16.942295170755138 0.3780752226737986 4 VPPE{I|L} 5 7 54.425 0.0 0.0 5.0837 0.0 0.0 0.0 532.2671602838499 532.2671602838499 40.92986265876426 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VPPE{I|L} 5.0837 - 39 + 1 1.948 75665.4 1.0 14236 5967 20202 HBL1_DMSO_200M_050219_2,20205 HBL1_DMSO_200M_050219_2,20205,VPIYAAYKF False False False False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20211 109.92 800.0 127140.0 25 0 23084.0 + 26468 NTIPLLYGI 9 93 1003.5824071340109 1002.5751306674108 1 1003.580859363079 MULTI CID FTMS 0 0 0 20210 75269.765625 0.7420860575292251 -3 0.0116043090820312 1 Unmodified _NTIPLLYGI_ ENSG00000133393|ENST00000255759|CEP20 92.65332237495696 0.0139087009896299 4 [{I|L}P]{I|L}NT{I|L}YG{I|L} 9 4 + 77.207 0.0 0.0 7.7008 7.7008 82.733 0.0 0.0 0.0 2.921656121837657 14.09256854528806 2.921656121837657 2.921656121837657 0 0.7302046884880937 1.5228787452803376 1.274227503252014 0.6861818737241735 [{I|L}P]{I|L}NT{I|L}YG{I|L};{[QS]|[NT]}{I|L}P{I|L}{I|L}YG{I|L};[{I|L}P]{I|L}NTY{I|L}G{I|L};[{I|L}P]{I|L}YNT{I|L}G{I|L};{[QS]|[NT]}{I|L}P{I|L}Y{I|L}G{I|L};[{I|L}P]{I|L}YGGT{I|L}G{I|L};[{I|L}P]{[QS]|[NT]}{I|L}{I|L}YG{I|L};[{I|L}P]{I|L}GGT{I|L}YG{I|L};[{I|L}P]{I|L}NTYG{I|L}{I|L};[{I|L}P]{I|L}NYT{I|L}G{I|L} 7.7008;7.4094;6.7257;6.4949;6.4343;6.4225;6.3521;6.098;5.9268;5.7977 -;+;-;-;-;-;-;-;-;- + 1342 1 1.948 73143.7 0.5099999904632568 14237 5972 20210 HBL1_DMSO_200M_050219_2,20211 HBL1_DMSO_200M_050219_2,20211,NTIPLLYGI True True NTIPLLYGI 109.92387 1003.58085936308 6398008.5 20210.0 ENSG00000133393|ENST00000255759|CEP20 5.210991541544597 1.0 True 9.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20212 109.94 800.0 201590.0 25 0 11593.0 + 12584 GVIGDPLLTL 10 103 997.5914498945804 996.5841734279804 1 997.5900146365166 MULTI CID FTMS 0 0 0 20210 100890.34375 0.3972255773874726 40 2 Unmodified _GVIGDPLLTL_ ENSG00000184209|ENST00000526639|SNRNP35;nc|ENSG00000184209|Q16560-2|SNRNP35 35.61225514009592 0.2039006631696762 4 [{I|L}P]{I|L}GD[VG]{I|L}T{I|L} 10 4 + 67.259 0.0 0.0 6.749 6.749 84.699 0.0 0.0 0.0 13.168242628472129 28.12322021856572 13.168242628472129 6.020599913279625 0 0.2887254899964357 1.5228787452803376 0.6747425010840047 0.0 [{I|L}P]{I|L}GD[VG]{I|L}T{I|L};[{I|L}P]{I|L}GV[DG]{I|L}T{I|L};[{I|L}P]{I|L}GD[VG]T{I|L}{I|L};[{I|L}P]{I|L}GEAA{I|L}T{I|L};[{I|L}P][SG]S{I|L}P{I|L}T{I|L};[{I|L}P]{I|L}G{[CA]|SS}P{I|L}T{I|L};[{I|L}P]{I|L}GD{I|L}KE{I|L};[{I|L}P]{I|L}GD{I|L}[VG]T{I|L};[{I|L}P]{I|L}GDKE{I|L}{I|L};[{I|L}P]{I|L}GV[DG]T{I|L}{I|L} 6.749;6.1449;5.9682;5.901;5.8254;5.704;5.4454;5.4276;5.394;5.364 -;-;-;-;-;-;-;-;-;- 4600 1 1.948 108319.0 0.5199999809265137 14238 5972 20210 HBL1_DMSO_200M_050219_2,20212 HBL1_DMSO_200M_050219_2,20212,GVIGDPLLTL False True GVIGDPLLTL 109.93774 997.590014636517 2160663.75 20210.0 ENSG00000184209|ENST00000526639|SNRNP35;;nc|ENSG00000184209|Q16560-2|SNRNP35 1.872894008954366 1.0 True 10.0 False self_gene PXD020620_cell_line HBL1_DMSO_200M_050219_2 20215 109.96 800.0 85369.0 25 0 2521.7 -1 0 111 1161.850634753704 0 1161.850634753704 PEAK CID FTMS 0 0 0 -1 0 1 4 H 1 -1 8.2268 0.0 0.0 0.35435 0.0 0.0 1101.9829334704957 1079.6480196588502 2181.630953129346 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 H 0.35435 - 5 + 1 1.948 42400.0 0.7300000190734863 14239 5974 20214 HBL1_DMSO_200M_050219_2,20215 HBL1_DMSO_200M_050219_2,20215, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20216 109.97 800.0 162360.0 25 0 11792.0 -1 0 126 999.610496616868 0 999.6088134646416 PEAK CID FTMS 0 0 0 20214 88920.421875 0.7090747917923158 -1 0.0039443969726562 2 4 A{I|L}V{I|L} 4 -1 15.918 0.0 0.0 0.79699 0.0 0.0 1129.7070028999483 468.2186068170532 1597.9256097170016 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}V{I|L} 0.79699 - 1386 + 1 1.948 90089.3 0.6200000047683716 14240 5974 20214 HBL1_DMSO_200M_050219_2,20216 HBL1_DMSO_200M_050219_2,20216, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20219 109.98 197.0 155580.0 25 0 2967.1 -1 0 77 1118.092944324017 0 1118.092944324017 PEAK CID FTMS 0 0 0 -1 0 1 4 A 1 -1 5.4846 0.0 0.0 0.24548 0.0 0.0 1549.1745838611216 610.9531954400999 2160.1277793012214 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.24548 - 14 + 1 1.948 25461.9 1.0 14241 5976 20218 HBL1_DMSO_200M_050219_2,20219 HBL1_DMSO_200M_050219_2,20219, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20220 110.0 800.0 121710.0 25 0 2045.0 -1 0 116 1157.311206042767 0 1157.311206042767 PEAK CID FTMS 0 0 0 -1 0 2 4 A 1 -1 6.9897 0.0 0.0 0.30224 0.0 0.0 2016.4588245837776 222.08918176822505 2238.548006352003 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.30224 - 15 + 1 1.948 59409.5 0.9700000286102296 14242 5976 20218 HBL1_DMSO_200M_050219_2,20220 HBL1_DMSO_200M_050219_2,20220, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20221 110.01 744.0 119670.0 25 0 1842.2 -1 0 142 1129.107104480267 0 1129.107104480267 PEAK CID FTMS 0 0 0 -1 0 3 4 TH 2 -1 6.1979 0.0 0.0 0.2747 0.0 0.0 1216.7112049548716 798.4035128229124 2015.114717777784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TH 0.2747 - 26 + 1 1.948 59795.0 1.0 14243 5976 20218 HBL1_DMSO_200M_050219_2,20221 HBL1_DMSO_200M_050219_2,20221, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20222 110.02 750.0 229680.0 25 0 5689.4 -1 0 185 1092.681811511517 0 1092.681811511517 PEAK CID FTMS 0 0 0 -1 0 4 4 NY{I|L}VGVD 7 -1 33.845 0.0 0.0 1.5502 0.0 0.0 1194.8527454822154 225.08892236881096 1419.9416678510263 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 NY{I|L}VGVD 1.5502 - 2117 + 1 1.948 102710.6 1.0 14244 5976 20218 HBL1_DMSO_200M_050219_2,20222 HBL1_DMSO_200M_050219_2,20222, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20223 110.02 126.0 343110.0 25 0 8266.6 -1 0 94 1108.640185534954 0 1108.640185534954 PEAK CID FTMS 0 0 0 -1 0 5 4 R 1 -1 5.4846 0.0 0.0 0.24758 0.0 0.0 1012.5334705798708 1043.6210421197875 2056.1545126996584 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.24758 - 6 + 1 1.948 36733.4 1.0 14245 5976 20218 HBL1_DMSO_200M_050219_2,20223 HBL1_DMSO_200M_050219_2,20223, False False False False unknown PXD020620_cell_line HBL1_DMSO_200M_050219_2 20224 110.03 310.0 277740.0 25 0 9409.4 -1 0 132 1111.105761706829 0 1111.105761706829 PEAK CID FTMS 0 0 0 -1 0 6 4 P 1 -1 3.9794 0.0 0.0 0.17924 0.0 0.0 1173.6743397204957 946.4391573541624 2120.113497074658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.17924 - 20 + 1 1.948 55843.6 1.0 14246 5976 20218 HBL1_DMSO_200M_050219_2,20224 HBL1_DMSO_200M_050219_2,20224, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 276 1.1193 800.0 73324.0 25 0 27760.0 + -1 TRMTSLRQMY 10 58 434.8819152712822 0 434.8819152712822 PEAK CID FTMS 0 0 0 -1 0 1 Oxidation (M) _TRMTSLRQM(Oxidation (M))Y_ REV__ENSG00000101104|ENST00000217073|PABPC1L;REV__ENST00000476056.5_1_20:43550276-43561823:+|nuORF;REV__ENST00000490798.5_1_20:43550276-43564067:+|nuORF;REV__ENST00000537323.5_1_20:43559226-43561823:+|nuORF;REV__nc|ENSG00000101104|Q4VXU2|PABPC1L 0.776531954647913 0.3961065659209837 5 D 1 -1 1.1092 0.0 0.0 0.12783 0.0 0.0 543.8444752185426 205.8539217584594 749.698396977002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.12783 - 1 + 1 2.6 51794.3 0.8999999761581421 0 274 275 SUDHL4_400M_050219_1,276 SUDHL4_400M_050219_1,276,TRMTSLRQMY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 1201 4.8492 800.0 57461.0 25 0 38658.0 3463 CERERERER 9 34 631.8036216161164 0 631.8041259646416 PEAK CID FTMS 0 0 0 1200 63594.4375 0.2637065163508259 -402 1.6170694828033447 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 5 A 1 9 1.9897 0.0 0.0 0.15771 0.0 0.0 1029.5448367607498 157.9841707818969 1187.5290075426467 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.15771 - 1 + 1 2.6 40765.1 0.7799999713897705 1 1198 1200 SUDHL4_400M_050219_1,1201 SUDHL4_400M_050219_1,1201,CERERERER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 1294 5.2317 800.0 77100.0 25 0 30505.0 45483 YTLNNNSTTKF 11 53 434.8822047440445 0 434.8826171755791 PEAK CID FTMS 0 0 0 1293 77279.6640625 0.6134718630676902 46 -0.1973838806152343 1 Unmodified _YTLNNNSTTKF_ CON__P13717 0.0 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.6 59285.0 0.3400000035762787 2 1290 1293 SUDHL4_400M_050219_1,1294 SUDHL4_400M_050219_1,1294,YTLNNNSTTKF False False False False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 1411 5.7107 800.0 64937.0 25 0 45457.0 6704 ECMEDVLTLPL 11 31 631.8036216161164 0 631.8035156130791 PEAK CID FTMS 0 0 0 1410 90771.3515625 0.37640079613886 -194 0.7928762435913086 1 Unmodified _ECMEDVLTLPL_ ENST00000558165.3_1_15:76551458-76551893:-|nuORF 2.9952420565917617 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.6 44330.8 0.9399999976158142 3 1406 1410 SUDHL4_400M_050219_1,1411 SUDHL4_400M_050219_1,1411,ECMEDVLTLPL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 1517 6.1454 800.0 98838.0 25 0 73506.0 3464 CERERERER 9 37 631.8036216161164 0 631.8038818240166 PEAK CID FTMS 0 0 0 1516 139594.609375 0.5788557865557911 -89 0.3578119277954101 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.6 63194.2 0.4900000095367431 4 1511 1516 SUDHL4_400M_050219_1,1517 SUDHL4_400M_050219_1,1517,CERERERER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 1836 7.4377 800.0 396150.0 25 0 62027.0 + 11980 GPEAGRKPA 9 107 441.7433624092182 881.4721718852364 2 441.7432128787041 MULTI CID FTMS 0 0 0 1835 126115.0625 0.0228450050996605 -13 0.0522518157958984 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 96.36657018975838 0.0123932121270252 5 GPEAGRKAP 9 2 + 97.041 0.0 0.0 11.009 11.009 97.774 0.0 0.0 0.0 35.88960401883574 8.830080363116721 8.830080363116721 14.532796692927263 0 2.1307196863200843 2.0 0.5 0.5941876774005248 GPEAGRKAP;GPEQRKAP;[PG]EAGRKPA;[PG]EA[RK]GPA;[EP]GAGRKPA;ADPAGRKAP;[EP]GA[RK]GPA;[PG]TA[RV]GGPA;[EP]QGRKPA;[PG]T[RV]QGPA 11.009;9.3602;8.3393;8.0607;6.7749;6.5274;6.4963;5.1182;5.0763;4.9944 -;-;+;-;-;-;-;-;-;- + 1459 + 1 2.6 245900.8 0.8600000143051147 5 1829 1835 SUDHL4_400M_050219_1,1836 SUDHL4_400M_050219_1,1836,GPEAGRKPA True True GPEAGRKPA 7.4377032 441.743212878704 67569654.0 1835.0 nc|ENSG00000204469|P48634-3|PRRC2A;;ENSG00000204469|ENST00000376033|PRRC2A;;nc|ENSG00000204469|P48634-2|PRRC2A 6.205162525177002 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 1840 7.4575 526.0 148710.0 25 0 6161.6 + 5926 DQALCVYDGQ 10 114 556.2416753132012 1110.4687976932023 2 556.2419311404228 MULTI CID FTMS 0 0 0 1839 104118.4140625 0.4355414428471257 -9 0.0496292114257812 1 Unmodified _DQALCVYDGQ_ REV__ENSG00000128052|ENST00000263923|KDR;REV__nc|ENSG00000128052|P35968-2|KDR;REV__nc|ENSG00000128052|P35968-3|KDR 29.84058131909904 0.2982332456971691 5 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQGQ 11 -1 + 81.407 0.0 0.0 7.3309 7.3309 84.715 0.0 0.0 0.0 1.1287548334904045 8.517805440806399 1.1287548334904045 1.1287548334904045 0 1.0397644799392252 0.0 1.341129063296272 1.5158715643802765 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQGQ;[AG]DAHEAQQGQ;[AG]DAHEAGAQGQ;{[QG]|[NA]}EHEAGAQGQ;[AG]DAHEQAQGQ;{[DA]|[EG]}QHEAGAQGQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQGQ;[QA]DHEAGAQGQ;[AG]ADHEAQQGQ;[AG]ADHEAGAQGQ 7.3309;7.2292;7.2107;6.9715;6.93;6.9215;6.6951;6.6913;6.6153;6.5968 -;-;-;-;-;-;-;-;-;- 1792 1 2.6 65613.1 1.0 6 1832 1839 SUDHL4_400M_050219_1,1840 SUDHL4_400M_050219_1,1840,DQALCVYDGQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 1841 7.4689 655.0 220310.0 25 0 22813.0 + -1 RASLAEMK 8 152 461.2444297811331 920.4743066290662 2 461.2445861697197 MULTI CID FTMS 0 0 0 1839 126843.8828125 0.989237936028738 -10 0.053687572479248 2 Oxidation (M) _RASLAEM(Oxidation (M))K_ REV__ENSG00000130559|ENST00000389532|CAMSAP1;REV__ENST00000483991.5_1_9:138703157-138717996:-|nuORF;REV__nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;REV__nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1 21.74664581756881 0.5868176546531598 5 [VG]W{[RE]|[WV]}TK 7 -1 30.55 0.0 0.0 3.319 0.0 0.0 0.0 60.97742193470621 60.97742193470621 13.058828357527322 0.0 0.0 0.0 0 0.6989700043360187 2.0 1.2302046884880935 0.0 [VG]W{[RE]|[WV]}TK 3.319 - 586 1 2.6 112051.3 1.0 7 1832 1839 SUDHL4_400M_050219_1,1841 SUDHL4_400M_050219_1,1841,RASLAEMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 1842 7.4827 800.0 25477.0 25 0 3051.9 -1 0 40 804.1560045714318 4015.743640524159 5 804.5563842654228 MULTI CID FTMS 0 0 0 1839 66404.4140625 0.6200585891322026 -8 0.0457415580749511 3 5 M 1 -1 4.6041 0.0 0.0 0.11465 0.0 0.0 3081.3348403306027 800.3407244164008 3881.675564747004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.11465 - 3 + 1 2.6 27387.2 0.3199999928474426 8 1832 1839 SUDHL4_400M_050219_1,1842 SUDHL4_400M_050219_1,1842, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 1845 7.4967 414.0 120590.0 25 0 8627.3 + 11987 GPEAKRQE 8 90 457.7380484886828 913.4615440441656 2 457.7377807497978 MULTI CID FTMS 0 0 0 1844 164612.71875 0.9093270460565008 1 -0.0099458694458007 1 Unmodified _GPEAKRQE_ REV__ENSG00000225614|ENST00000565624|ZNF469 9.347437153973935 0.7675937258251505 5 [PG]EA{[NV]|[RG]}K{[CP]|[EA]} 9 -1 + 31.373 0.0 0.0 3.4345 3.4345 85.744 0.0 0.0 0.0 20.53526928035143 1.4511996594528431 1.4511996594528431 23.679767852945943 0 0.0 2.0 0.0 0.0 [PG]EA{[NV]|[RG]}K{[CP]|[EA]};{[DA]|[EG]}PA{[NV]|[RG]}K{[CP]|[EA]} 3.4345;0.84218 -;- 88 1 2.6 42459.3 1.0 9 1834 1844 SUDHL4_400M_050219_1,1845 SUDHL4_400M_050219_1,1845,GPEAKRQE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 1851 7.5216 349.0 171060.0 25 0 9504.7 26998 PEKGRAAP 8 124 413.2318370478151 824.4491211624302 2 413.2321044802666 MULTI CID FTMS 0 0 0 1850 67223.75 0.6482607652705135 -5 0.0260272026062011 1 Unmodified _PEKGRAAP_ ENSG00000168137|ENST00000402198|SETD5;ENST00000443339.5_1_3:9475802-9506425:+|nuORF;nc|ENSG00000168137|Q9C0A6-2|SETD5;nc|ENSG00000168137|Q9C0A6-3|SETD5 19.438996006549623 0.6237395211498085 5 [EP]W 3 6 29.137 0.0 0.0 3.5341 0.0 0.0 0.0 409.2568048384646 409.2568048384646 16.66264035428867 0.0 0.0 0.0 0 0.5 2.0 0.3054621874040891 0.0 [EP]W 3.5341 - 125 1 3.583 54048.7 1.0 10 1839 1850 SUDHL4_400M_050219_1,1851 SUDHL4_400M_050219_1,1851,PEKGRAAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 1855 7.5461 800.0 52247.0 25 0 2087.1 -1 0 38 1005.1931885958718 0 1005.192126452923 PEAK CID FTMS 0 0 0 1854 27892.205078125 0.4518957058480029 1 -0.0302562713623046 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.583 36117.4 0.3400000035762787 11 1842 1854 SUDHL4_400M_050219_1,1855 SUDHL4_400M_050219_1,1855, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 1856 7.56 800.0 122340.0 25 0 27726.0 -1 CTSCSCMA 8 39 992.29698697122 991.28971050462 1 992.2989990115166 MULTI CID FTMS 0 0 0 1854 114259.53125 0.6031950835122888 -7 0.0330371856689453 2 3 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))TSC(Carbamidomethyl (C))SC(Carbamidomethyl (C))M(Oxidation (M))A_ ENSG00000135253|ENST00000610776|KCP;ENST00000492679.5_1_7:128505031-128520709:-|nuORF;nc|ENSG00000135253|Q6ZWJ8|KCP 0.6903765706972694 0.8201419426409876 5 C(Carbamidomethyl (C))[MD] 3 -1 7.4473 0.0 0.0 0.75127 0.0 0.0 567.1854452231731 0.0 567.1854452231731 0.0 0.4575749056067497 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))[MD] 0.75127 - 6 + 1 3.583 72525.7 0.4300000071525574 12 1842 1854 SUDHL4_400M_050219_1,1856 SUDHL4_400M_050219_1,1856,CTSCSCMA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 1861 7.5821 414.0 161350.0 25 0 13204.0 -1 0 55 461.2360963945644 1840.9152797118568 4 461.4866515994072 MULTI CID FTMS 0 0 0 1860 25378.654296875 0.1685171006740543 -13 0.0894746780395507 1 5 {I|L}{M(Oxidation (M))|F}K 3 -1 19.341 0.0 0.0 1.0506 0.0 0.0 1434.6903479265045 0.0 1434.6903479265045 0.0 12.351453248366798 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {I|L}{M(Oxidation (M))|F}K 1.0506 - 38 + 1 3.583 58392.9 1.0 13 1846 1860 SUDHL4_400M_050219_1,1861 SUDHL4_400M_050219_1,1861, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 1866 7.6107 800.0 65632.0 25 0 6857.6 + -1 CCCCCCEMFAR 11 62 758.2243823809666 0 758.2249023318291 PEAK CID FTMS 0 0 0 1865 77293.8515625 0.7408322355947646 1 -0.0163917541503906 1 4 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))CCEM(Oxidation (M))FAR_ REV__ENSG00000170775|ENST00000303921|GPR37 0.0 0.4761840153648598 5 Y 1 -1 0.48455 0.0 0.0 0.031995 0.0 0.0 786.2223110492395 562.1315401666624 1348.3538512159018 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.031995 - 1 + 1 3.953 45079.6 0.4199999868869781 14 1850 1865 SUDHL4_400M_050219_1,1866 SUDHL4_400M_050219_1,1866,CCCCCCEMFAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 1869 7.6311 800.0 52195.0 25 0 18860.0 -1 0 24 973.3246564553784 0 973.3239623904228 PEAK CID FTMS 0 0 0 1868 83967.2578125 0.8816679373476352 -6 0.04254150390625 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 40461.0 0.3600000143051147 15 1852 1868 SUDHL4_400M_050219_1,1869 SUDHL4_400M_050219_1,1869, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 1875 7.6636 800.0 95076.0 25 0 62222.0 + -1 GVNMVNMPNRV 11 34 631.8036960165638 0 631.8019897341728 PEAK CID FTMS 0 0 0 1874 146217.5 0.045063585368477 -455 1.968900203704834 1 2 Oxidation (M) _GVNM(Oxidation (M))VNM(Oxidation (M))PNRV_ REV__ENST00000399070.3_2_18:32886564-32887857:+|nuORF 1.3295316138638542 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 63225.3 0.4300000071525574 16 1857 1874 SUDHL4_400M_050219_1,1875 SUDHL4_400M_050219_1,1875,GVNMVNMPNRV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 1879 7.6763 30.0 1780800.0 25 0 251170.0 + 11981 GPEAGRKPA 9 75 441.7433624092182 881.4721718852364 2 441.7433044314384 MULTI CID FTMS 0 0 0 1878 1878806.0 0.3403347054700369 18 -0.0981450080871582 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 53.832793166522166 0.0319663582346103 5 GPEA{[NV]|[RG]}K[PA] 9 0 + 71.929 0.0 0.0 8.1601 8.1601 98.504 0.0 0.0 0.0 49.25250945692483 3.753246544333777 3.753246544333777 71.92857185869514 0 1.805462187404089 2.0 0.5 0.0 + + GPEA{[NV]|[RG]}K[PA] 8.1601 + + 79 + 1 3.953 47563.7 1.0 17 1860 1878 SUDHL4_400M_050219_1,1879 SUDHL4_400M_050219_1,1879,GPEAGRKPA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 1887 7.7169 800.0 71053.0 25 0 3215.7 + -1 GADAMAEVFNA 11 108 556.2416753132012 1110.4687976932023 2 556.2409545779228 MULTI CID FTMS 0 0 0 1886 109899.6796875 0.4597252608054313 26 -0.1519389152526855 1 Oxidation (M) _GADAM(Oxidation (M))AEVFNA_ REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1 39.94969957227396 0.2131707853268865 5 [AG]DAHEAQQ{[QG]|[NA]} 11 -1 + 71.687 0.0 0.0 6.4556 6.4556 88.428 0.0 0.0 0.0 6.575773191777927 7.367585652254178 6.575773191777927 6.575773191777927 0 0.4247425010840047 1.6989700043360187 1.666386562212267 0.0 [AG]DAHEAQQ{[QG]|[NA]};{[DA]|[EG]}GAHEAQQ{[QG]|[NA]};{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQ{[QG]|[NA]};[AG]ADHEAQQ{[QG]|[NA]};{[DA]|[EG]}QHEAQQ{[QG]|[NA]};[AG]DAHEA[AG]Q{[QG]|[NA]};[AG]DAHEAQ[AG]{[QG]|[NA]};[AG]GEHEAQQ{[QG]|[NA]};[AG]AHDEAQQ{[QG]|[NA]};[QA]DHEAQQ{[QG]|[NA]} 6.4556;5.8634;5.7386;5.733;5.668;5.6336;5.6336;5.4207;5.2276;5.0687 -;-;-;-;-;-;-;-;-;- 895 1 3.953 46998.8 0.4600000083446502 18 1867 1886 SUDHL4_400M_050219_1,1887 SUDHL4_400M_050219_1,1887,GADAMAEVFNA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 1892 7.7453 800.0 23580.0 25 0 6506.6 -1 0 32 804.1560045714318 4015.743640524159 5 804.3555786013603 MULTI CID FTMS 0 0 0 1891 19233.087890625 0.1795910936115202 29 -0.1517491340637207 1 5 {I|L}{[{M(Oxidation (M))|F}D]|MM} 3 -1 10.458 0.0 0.0 0.26041 0.0 0.0 3622.559409140085 0.0 3622.559409140085 0.0 4.9730248405664685 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{[{M(Oxidation (M))|F}D]|MM} 0.26041 - 3 1 3.953 22874.5 0.3000000119209289 19 1871 1891 SUDHL4_400M_050219_1,1892 SUDHL4_400M_050219_1,1892, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 1908 7.8182 800.0 83378.0 25 0 20655.0 28157 PPRFSWPAEIC 11 59 434.8822093510267 0 434.8822814822197 PEAK CID FTMS 0 0 0 1907 70165.46875 0.7872668170925954 6 -0.0467495918273925 1 Unmodified _PPRFSWPAEIC_ ENST00000336615.8_2_11:825115-825166:+|nuORF 3.2813086475875832 0.4761840153648598 5 V 1 11 3.0989 0.0 0.0 0.35712 0.0 0.0 433.5311430272065 332.11972986392817 765.6508728911347 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.35712 - 3 + 1 3.953 62405.5 0.4000000059604645 20 1886 1907 SUDHL4_400M_050219_1,1908 SUDHL4_400M_050219_1,1908,PPRFSWPAEIC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 1914 7.8485 596.0 194600.0 25 0 36377.0 -1 MLLRDARSP 9 141 358.86166734611203 1073.563172638536 3 358.8622619509697 MULTI CID FTMS 0 0 0 1913 62801.2109375 0.6759082910092998 3 -0.0222749710083007 1 Oxidation (M) _M(Oxidation (M))LLRDARSP_ ENSG00000165837|ENST00000298738|ERICH6B;nc|ENSG00000165837|Q5W0A0-2|ERICH6B 4.189502756095605 0.7684307469601125 5 AH[{I|L}T]{M(Oxidation (M))|F}Q 6 -1 14.838 0.0 0.0 1.3821 0.0 0.0 358.20225722480626 0.0 358.20225722480626 0.0 1.5668186536885305 0.0 0.0 0 0.5172203223519531 0.0 0.0 0.0 AH[{I|L}T]{M(Oxidation (M))|F}Q 1.3821 - 150 1 3.953 95622.0 1.0 21 1891 1913 SUDHL4_400M_050219_1,1914 SUDHL4_400M_050219_1,1914,MLLRDARSP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 1934 7.9374 800.0 104330.0 25 0 71229.0 3465 CERERERER 9 43 631.8036960165638 0 631.8029662966728 PEAK CID FTMS 0 0 0 1933 164411.34375 0.0506708473652206 -402 1.804032802581787 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 5 Q 1 9 1.5938 0.0 0.0 0.12633 0.0 0.0 729.5986507227775 400.9129427545532 1130.5115934773307 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.12633 - 1 + 1 3.953 65721.5 0.4000000059604645 22 1910 1933 SUDHL4_400M_050219_1,1934 SUDHL4_400M_050219_1,1934,CERERERER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 1936 7.9439 208.0 275710.0 25 0 39677.0 + 11982 GPEAGRKPA 9 68 441.7433624092182 881.4721718852364 2 441.7433959841728 MULTI CID FTMS 0 0 0 1935 245034.375 0.044386542221847 69 -0.3247919082641601 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 47.74868867922204 0.0453060283459952 5 GPEA 4 5 65.79 0.0 0.0 7.4636 0.0 0.0 0.0 524.296342429008 524.296342429008 54.00698242319399 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.3807196863200844 0.0 + GPEA 7.4636 + + 63 + 1 3.953 52483.1 1.0 23 1911 1935 SUDHL4_400M_050219_1,1936 SUDHL4_400M_050219_1,1936,GPEAGRKPA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 1960 8.0413 335.0 156440.0 25 0 34135.0 + 35654 SVDARMREEK 10 76 407.5389282547756 1219.5949553645266 3 407.5385314822197 MULTI CID FTMS 0 0 0 1959 78484.2890625 0.1174616346917179 -37 0.1640715599060058 1 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 13.90604991867851 0.6142120002215601 5 [VS]A 3 -1 22.676 0.0 0.0 1.8593 0.0 0.0 0.0 959.4346824975922 959.4346824975922 3.369984195293206 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]A 1.8593 - 105 1 3.953 47212.9 1.0 24 1934 1959 SUDHL4_400M_050219_1,1960 SUDHL4_400M_050219_1,1960,SVDARMREEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 1981 8.1295 531.0 173520.0 25 0 104020.0 -1 HCMWHILIC 9 40 614.7770522300566 0 614.7769042849541 PEAK CID FTMS 0 0 0 1980 206092.609375 0.3650582518843918 -354 1.6179614067077637 1 Carbamidomethyl (C),Oxidation (M) _HCM(Oxidation (M))WHILIC(Carbamidomethyl (C))_ ENSG00000177076|ENST00000340967|ACER2;nc|ENSG00000177076|Q5QJU3-2|ACER2 0.6014990680409731 0.3444685223463735 5 M 1 -1 6.9897 0.0 0.0 0.56941 0.0 0.0 649.1632830716381 444.3123262994751 1093.4756093711133 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.56941 + + 2 + 1 3.953 72112.1 1.0 25 1954 1980 SUDHL4_400M_050219_1,1981 SUDHL4_400M_050219_1,1981,HCMWHILIC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 1982 8.1433 800.0 77674.0 25 0 5463.3 -1 NEQRMKAAEK 10 72 610.8047876225577 1219.5950223119153 2 610.8040649294853 MULTI CID FTMS 0 0 0 1980 97672.5234375 0.5133558268907645 -14 0.0563163757324218 2 Oxidation (M) _NEQRM(Oxidation (M))KAAEK_ ENSG00000075856|ENST00000546815|SART3;nc|ENSG00000075856|Q15020-4|SART3 29.43715596616401 0.3072975788498757 5 [VS]AGHHVDAAEK 12 -1 + 115.73 0.0 0.0 9.4896 9.4896 96.392 0.0 0.0 0.0 18.83030193062976 16.611814434466197 16.611814434466197 9.864389423626136 0 3.84948500216801 1.6989700043360187 0.75 0.0 [VS]AGHHVDAAEK;[VS]QHHVDAAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHHVDAAEK;[VS]AGHHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHHVWAEK;[VS]QHHVD[DV]GK;[VS]A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVWAEK;[HQ]VSHVDAAEK;[WQ]HHVWAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHHVD[DV]GK 9.4896;8.6808;7.9456;7.5862;7.2433;6.7773;6.5713;6.1405;6.0551;6.0422 -;-;-;-;-;-;-;-;-;- 2099 1 3.953 54099.1 0.4000000059604645 26 1954 1980 SUDHL4_400M_050219_1,1982 SUDHL4_400M_050219_1,1982,NEQRMKAAEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 1992 8.1876 549.0 129410.0 25 0 92204.0 -1 RMTFRFPEY 9 32 631.8036960165638 0 631.8036987185478 PEAK CID FTMS 0 0 0 1991 173225.296875 0.0533872686491449 -349 1.61968994140625 1 Oxidation (M) _RM(Oxidation (M))TFRFPEY_ ENST00000607391.5_1_6:159462930-159463077:+|nuORF 0.6014990680409731 0.3444685223463735 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 58523.8 1.0 27 1963 1991 SUDHL4_400M_050219_1,1992 SUDHL4_400M_050219_1,1992,RMTFRFPEY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2001 8.23 677.0 166200.0 25 0 40210.0 + 5321 DLERFKEFK 9 111 404.5508013943455 1210.6305747832364 3 404.5507385134697 MULTI CID FTMS 0 0 0 2000 74756.8671875 0.8194886613844421 -5 0.0199432373046875 1 Unmodified _DLERFKEFK_ ENSG00000125482|ENST00000334270|TTF1 7.608950283845883 0.6490595679007971 5 VDAAEKK 7 7 28.133 0.0 0.0 2.3238 0.0 0.0 451.216912221957 0.0 451.216912221957 0.0 11.108666421675586 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.2396518287104437 VDAAEKK 2.3238 - 194 + 1 3.953 89791.1 1.0 28 1971 2000 SUDHL4_400M_050219_1,2001 SUDHL4_400M_050219_1,2001,DLERFKEFK False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2017 8.2918 141.0 386780.0 25 0 53460.0 + 35655 SVDARMREEK 10 81 407.5389282547756 1219.5949553645266 3 407.5387451052666 MULTI CID FTMS 0 0 0 2016 382305.5625 0.5721684793147099 15 -0.0615491867065429 1 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 17.11289562659939 0.5604042439455784 5 [VS]QHHVDAAEK 11 -1 [VS]Q + + 37.389 23.222 7.3917 3.0657 3.0657 54.268 0.0 0.0 0.0 0.0 10.82177864628136 0.0 0.0 0 1.0924778212679485 0.0 0.3054621874040891 0.3054621874040891 [VS]QHHVDAAEK 3.0657 - 320 + 1 3.953 49191.6 1.0 29 1986 2016 SUDHL4_400M_050219_1,2017 SUDHL4_400M_050219_1,2017,SVDARMREEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2054 8.4444 531.0 126690.0 25 0 86206.0 -1 GEMVLFLFCF 10 40 631.8036960165638 0 631.8038207888603 PEAK CID FTMS 0 0 0 2053 141882.390625 0.0437275238751401 -290 1.402472972869873 1 Carbamidomethyl (C) _GEMVLFLFC(Carbamidomethyl (C))F_ ENST00000258761.7_2_7:16745756-16745879:+|nuORF 1.844237919475145 0.3961065659209837 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 56426.8 1.0 30 2022 2053 SUDHL4_400M_050219_1,2054 SUDHL4_400M_050219_1,2054,GEMVLFLFCF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2068 8.5013 338.0 281300.0 25 0 57717.0 31362 RNHTRVNCYK 10 69 430.8882395088808 0 430.8882629275322 PEAK CID FTMS 0 0 0 2067 192994.578125 0.4336742411049341 -960 4.153947353363037 1 Unmodified _RNHTRVNCYK_ ENSG00000268696|ENST00000600766|ZNF723;ENST00000600766.1_3_19:23032061-23041232:+|nuORF 3.5964929083625545 0.3961065659209837 5 T 1 9 6.9897 0.0 0.0 0.81298 0.0 0.0 430.5282967894429 325.16184412174067 755.6901409111836 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + T 0.81298 + + 3 + 1 3.953 78940.3 1.0 31 2035 2067 SUDHL4_400M_050219_1,2068 SUDHL4_400M_050219_1,2068,RNHTRVNCYK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2073 8.5296 800.0 124170.0 25 0 42095.0 + 11983 GPEAGRKPA 9 97 441.7431711691388 881.4717894050776 2 441.7432739138603 MULTI CID FTMS 0 0 0 2072 73667.0546875 0.4012049615834941 -15 0.0647897720336914 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 39.94969957227396 0.0757326808254658 5 GPEA{[NV]|[RG]}KAP 9 2 + 62.094 0.0 0.0 7.0443 7.0443 96.075 0.0 0.0 0.0 50.49775480175354 2.6811468478550893 2.6811468478550893 32.57399580914439 0 1.2302046884880935 1.6989700043360187 0.5 0.0 GPEA{[NV]|[RG]}KAP;[PG]T{[QG]|[NA]}[RV]AP;[VS]K{[NV]|[RG]}A[HQ];[TP]G{[QG]|[NA]}[RV]AP 7.0443;3.3489;1.7788;0.017396 -;-;-;- 102 + 1 3.953 81061.5 0.8899999856948853 32 2039 2072 SUDHL4_400M_050219_1,2073 SUDHL4_400M_050219_1,2073,GPEAGRKPA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2078 8.558 800.0 147180.0 25 0 34170.0 8800 EWLNDRYPK 9 118 407.5388301712081 1219.5946611138245 3 407.5391723513603 MULTI CID FTMS 0 0 0 2077 69620.734375 0.4981608509681079 -11 0.06103515625 1 Unmodified _EWLNDRYPK_ ENST00000418303.1_1_7:43958366-43959461:+|nuORF 7.910154910731844 0.6385446671287552 5 [WQ]HHVDR 7 7 45.467 0.0 0.0 3.7281 0.0 0.0 0.0 258.10121278948776 258.10121278948776 29.48109281050643 0.0 0.0 0.0 0 0.805462187404089 1.2218487496163564 0.0 0.0 [WQ]HHVDR 3.7281 - 287 + 1 3.953 97404.0 0.9700000286102296 33 2043 2077 SUDHL4_400M_050219_1,2078 SUDHL4_400M_050219_1,2078,EWLNDRYPK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2113 8.705 665.0 143240.0 25 0 102280.0 6685 ECARVLQDLDT 11 41 631.8036960165638 0 631.8033325076103 PEAK CID FTMS 0 0 0 2112 226141.4375 0.0696957886308504 -235 1.1611661911010742 1 Unmodified _ECARVLQDLDT_ ENSG00000160117|ENST00000404085|ANKLE1;ENST00000404085.5_1_19:17392508-17397358:+|nuORF;ENST00000596099.1_1_19:17392905-17393816:+|nuORF;nc|ENSG00000160117|Q8NAG6-1|ANKLE1 1.0714618166137932 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 76743.8 1.0 34 2077 2112 SUDHL4_400M_050219_1,2113 SUDHL4_400M_050219_1,2113,ECARVLQDLDT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2123 8.7536 800.0 109000.0 25 0 23895.0 + -1 QPPAMVWRLM 10 71 434.8822236114989 0 434.8822814822197 PEAK CID FTMS 0 0 0 2122 87648.21875 0.7374752960935536 -161 0.7408623695373535 1 Acetyl (Protein N-term),2 Oxidation (M) _(Acetyl (Protein N-term))QPPAM(Oxidation (M))VWRLM(Oxidation (M))_ REV__ENST00000461290.5_1_2:73467648-73470156:+|nuORF 1.9063754702782607 0.3961065659209837 5 R 1 -1 4.9743 0.0 0.0 0.57324 0.0 0.0 433.5224295454603 275.10480676822505 708.6272363136853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.25 R 0.57324 + + 6 + 1 3.953 71347.6 0.3700000047683716 35 2086 2122 SUDHL4_400M_050219_1,2123 SUDHL4_400M_050219_1,2123,QPPAMVWRLM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2132 8.7982 800.0 98533.0 25 0 38021.0 + 11676 GLEGSGGK 8 52 704.3578060807746 703.3505296141745 1 704.3583251833916 MULTI CID FTMS 0 0 0 2131 131213.140625 0.5181131090873385 40 -0.187413215637207 1 Unmodified _GLEGSGGK_ REV__ENST00000486124.5_1_6:31905151-31913001:+|nuORF 44.40701690623563 0.1655546087385432 5 SVSNK 5 -1 57.457 0.0 0.0 8.1691 0.0 0.0 170.0689266862433 0.0 170.0689266862433 0.0 39.53300079214904 0.0 0.0 0 1.610924374808178 0.0 0.2887254899964357 1.0044321917401078 SVSNK 8.1691 - 113 + 1 3.953 62597.4 0.4000000059604645 36 2094 2131 SUDHL4_400M_050219_1,2132 SUDHL4_400M_050219_1,2132,GLEGSGGK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2133 8.812 800.0 43042.0 25 0 30689.0 -1 CNMLRWRPQWR 11 30 801.8981266842543 0 801.8978149294853 PEAK CID FTMS 0 0 0 2131 82770.78125 0.7307178610901806 2 -0.0342769622802734 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))NMLRWRPQWR_ ENST00000375571.5_1_20:31436776-31436899:+|nuORF 0.0 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 35592.9 0.3499999940395355 37 2094 2131 SUDHL4_400M_050219_1,2133 SUDHL4_400M_050219_1,2133,CNMLRWRPQWR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2176 8.9936 800.0 14873.0 25 0 1564.8 65 AAEEKEDGRRW 11 36 673.8254529270639 0 673.8255493044853 PEAK CID FTMS 0 0 0 2175 153315.109375 0.5215222599366849 68 -0.298222541809082 1 Unmodified _AAEEKEDGRRW_ ENSG00000140299|ENST00000607373|BNIP2;ENST00000560458.5_1_15:59970098-59981480:-|nuORF;nc|ENSG00000140299|Q12982-2|BNIP2 0.3506318815782774 0.47618401536486 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 17119.4 0.4799999892711639 38 2136 2175 SUDHL4_400M_050219_1,2176 SUDHL4_400M_050219_1,2176,AAEEKEDGRRW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2206 9.1225 800.0 76110.0 25 0 4611.6 + 41934 VQHVDAAEK 9 88 498.7592447858997 995.5039366385996 2 498.7589904665947 MULTI CID FTMS 0 0 0 2205 78996.125 0.6498925073140596 -6 0.0240049362182617 1 Unmodified _VQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 48.07275321834293 0.0445955024081691 5 {[QV]|[N{I|L}]|[RA]|[KV]}HVDAAEK 9 0 + 59.254 0.0 0.0 5.9522 5.9522 93.453 0.0 0.0 0.0 18.16158953800281 16.35512976221092 16.35512976221092 37.42127686072563 0 1.25 0.0 0.3054621874040891 0.2887254899964357 + + {[QV]|[N{I|L}]|[RA]|[KV]}HVDAAEK;{[QV]|[N{I|L}]|[RA]|[KV]}K{M(Oxidation (M))|F}AA[W{M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}HHH[NP]K;{[QV]|[N{I|L}]|[RA]|[KV]}H{[{M(Oxidation (M))|F}H]|[RQ]}[NS]K;{[QV]|[N{I|L}]|[RA]|[KV]}KAA{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}[RN]{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}] 5.9522;2.1931;2.0604;1.9631;0.612;0.4474 +;-;-;-;-;- + 282 + 1 3.953 54856.5 0.3799999952316284 39 2165 2205 SUDHL4_400M_050219_1,2206 SUDHL4_400M_050219_1,2206,VQHVDAAEK True True VQHVDAAEK 9.1225158 498.758990466595 705830.6875 2205.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 6.792343775431315 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2291 9.4703 662.0 19231.0 25 0 2115.0 + -1 YDYQCMYDF 9 39 652.7330317316844 0 652.7333251833916 PEAK CID FTMS 0 0 0 2290 102297.9375 0.4428444400433275 -45 0.1808557510375976 1 Carbamidomethyl (C) _YDYQC(Carbamidomethyl (C))MYDF_ REV__ENSG00000149090|ENST00000619888|PAMR1;REV__ENST00000534803.1_1_11:35474916-35547133:-|nuORF;REV__nc|ENSG00000149090|Q6UXH9-2|PAMR1 0.6014990680409731 0.3444685223463735 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 17133.4 1.0 40 2249 2290 SUDHL4_400M_050219_1,2291 SUDHL4_400M_050219_1,2291,YDYQCMYDF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2322 9.6047 800.0 105030.0 25 0 28384.0 7751 ELEPVEGNPYR 11 77 434.8822236114989 0 434.8820373415947 PEAK CID FTMS 0 0 0 2321 82990.2421875 0.6982829121111178 32 -0.1610469818115234 1 Unmodified _ELEPVEGNPYR_ ENSG00000111581|ENST00000229179|NUP107;nc|ENSG00000111581|P57740-2|NUP107;nc|ENSG00000111581|P57740-3|NUP107 2.9952420565917617 0.4761840153648598 5 R 1 10 5.1057 0.0 0.0 0.58839 0.0 0.0 433.5223074751478 275.10407434635005 708.6263818214978 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 + R 0.58839 + + 9 + 1 3.953 72388.3 0.4300000071525574 41 2279 2321 SUDHL4_400M_050219_1,2322 SUDHL4_400M_050219_1,2322,ELEPVEGNPYR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2330 9.6359 251.0 257640.0 25 0 29863.0 + -1 IQRLETMK 8 71 517.786903661815 1033.55925439043 2 517.7869140505791 MULTI CID FTMS 0 0 0 2329 205971.53125 0.2933377666451469 -42 0.1925697326660156 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 5 [KT]T[YK]TTK 8 -1 34.486 0.0 0.0 3.3367 0.0 0.0 0.0 78.98651866884714 78.98651866884714 3.673487989661048 0.0 0.0 0.0 0 0.0 0.0 1.6861818737241734 0.0 [KT]T[YK]TTK 3.3367 - 105 1 3.953 53304.9 1.0 42 2286 2329 SUDHL4_400M_050219_1,2330 SUDHL4_400M_050219_1,2330,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2337 9.6723 800.0 17036.0 25 0 4901.8 -1 0 20 1177.1484290230171 3528.4234576692525 3 1177.818286120892 MULTI CID FTMS 0 0 0 2336 59163.6484375 0.7750603226926314 -10 0.0432720184326171 1 5 Y 1 -1 5.4846 0.0 0.0 0.15544 0.0 0.0 1310.4744353077274 2051.8887423150995 3362.3631776228267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.15544 - 1 + 1 3.953 21301.3 0.2899999916553497 43 2292 2336 SUDHL4_400M_050219_1,2337 SUDHL4_400M_050219_1,2337, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2356 9.748 260.0 247170.0 25 0 81714.0 + 28633 PVHILFHPDTD 11 59 430.8882395088808 0 430.8880493044853 PEAK CID FTMS 0 0 0 2355 236018.890625 0.5303533097801907 -685 3.140820026397705 1 Unmodified _PVHILFHPDTD_ REV__CON__Q0VCM5 6.2057823575117 0.47618401536486 5 P 1 -1 0.48455 0.0 0.0 0.056359 0.0 0.0 528.6243661253804 231.0624178522094 759.6867839775898 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.056359 + + 2 + 1 3.953 57473.8 1.0 44 2310 2355 SUDHL4_400M_050219_1,2356 SUDHL4_400M_050219_1,2356,PVHILFHPDTD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2364 9.7835 502.0 74447.0 25 0 47678.0 + 13061 HCAGQHSHHMQ 11 31 636.7589318198417 0 636.7587158083916 PEAK CID FTMS 0 0 0 2363 206056.96875 0.5470183340679371 -18 0.075566291809082 1 Unmodified _HCAGQHSHHMQ_ REV__ENST00000443967.5_1_5:175717389-175717593:+|nuORF 0.0 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 32586.2 1.0 45 2317 2363 SUDHL4_400M_050219_1,2364 SUDHL4_400M_050219_1,2364,HCAGQHSHHMQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2380 9.8564 800.0 97271.0 25 0 24757.0 26962 PECERRPSICL 11 64 434.88224855497873 0 434.8824951052666 PEAK CID FTMS 0 0 0 2379 77668.4609375 0.5556581927023703 -49 0.2233381271362304 1 Unmodified _PECERRPSICL_ ENST00000522621.1_2_8:62044343-62212351:+|nuORF 3.2813086475875832 0.4761840153648598 5 R 1 10 6.0168 0.0 0.0 0.69338 0.0 0.0 433.5222047742169 275.10395227603755 708.6261570502544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 + R 0.69338 + + 9 + 1 3.953 66328.8 0.3700000047683716 46 2332 2379 SUDHL4_400M_050219_1,2380 SUDHL4_400M_050219_1,2380,PECERRPSICL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2388 9.8852 104.0 628780.0 25 0 84986.0 + -1 IQRLETMK 8 86 517.786903661815 1033.55925439043 2 517.7869750857353 MULTI CID FTMS 0 0 0 2387 582410.9375 0.8294501800280044 11 -0.0450677871704101 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 32.30548876998284 0.3644845974844379 5 [KT]T[YK]TTK 8 -1 35.182 0.0 0.0 3.404 0.0 0.0 0.0 78.98693865256556 78.98693865256556 0.8746287278570648 0.0 0.0 0.0 0 0.0 0.0 1.579689690656103 0.0 [KT]T[YK]TTK 3.404 - 147 1 3.953 56473.1 1.0 47 2339 2387 SUDHL4_400M_050219_1,2388 SUDHL4_400M_050219_1,2388,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2402 9.9498 800.0 90476.0 25 0 11424.0 + 31806 RSTKTGTAY 9 104 492.7592464631082 983.5039399930164 2 492.7589599490166 MULTI CID FTMS 0 0 0 2401 86249.3515625 0.7001507174537661 -14 0.0569124221801757 1 Unmodified _RSTKTGTAY_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62496043-62497015:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5 30.7034409873982 0.1405282614900322 5 TGTAY 5 4 28.015 0.0 0.0 2.8485 0.0 0.0 472.2747728382092 0.0 472.2747728382092 0.0 17.557809497117844 0.0 0.0 0 0.8182503180159344 0.0 1.0 0.0 + TGTAY 2.8485 + + 36 1 3.953 62664.1 0.4199999868869781 48 2352 2401 SUDHL4_400M_050219_1,2402 SUDHL4_400M_050219_1,2402,RSTKTGTAY False True RSTKTGTAY 9.9497753 492.758959949017 1043043.1875 2401.0 ENST00000581230.5_1_17:62496043-62497015:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5 4.283590157826741 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2416 10.01 527.0 150700.0 25 0 5377.2 37146 THPDQAEK 8 115 463.2224425557482 924.4303321782965 2 463.2220947146416 MULTI CID FTMS 0 0 0 2415 104937.7421875 0.2185587554285658 -14 0.0686597824096679 1 Unmodified _THPDQAEK_ ENST00000546949.5_1_19:58514261-58515786:+|nuORF 30.63653989081413 0.3996269429323407 5 HVDAAEK 7 3 51.195 0.0 0.0 5.538 0.0 0.0 156.05405802195725 0.0 156.05405802195725 0.0 28.448452152857065 0.0 0.0 0 2.024227503252014 0.0 0.4247425010840047 0.3252574989159953 HVDAAEK 5.538 - 260 + 1 3.953 65879.2 1.0 49 2365 2415 SUDHL4_400M_050219_1,2416 SUDHL4_400M_050219_1,2416,THPDQAEK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2417 10.024 800.0 48891.0 25 0 16085.0 + -1 CQEQIKCCEME 11 50 510.86224484135977 0 510.8622924685478 PEAK CID FTMS 0 0 0 2415 85800.703125 0.9175423394063428 19 -0.2686128616333008 2 3 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))QEQIKC(Carbamidomethyl (C))C(Carbamidomethyl (C))EM(Oxidation (M))E_ REV__ENST00000464249.1_1_6:170068797-170070787:-|nuORF 0.4545168274142398 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 41043.5 0.4000000059604645 50 2365 2415 SUDHL4_400M_050219_1,2417 SUDHL4_400M_050219_1,2417,CQEQIKCCEME False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2421 10.039 231.0 335140.0 25 0 37579.0 + 36054 SVQHVDAAEK 10 104 361.8525316454098 1082.5357655364296 3 361.8523437380791 MULTI CID FTMS 0 0 0 2420 163249.34375 0.0031673253129155 -14 0.0780906677246093 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 5 HVDAAEK 7 3 26.916 0.0 0.0 2.4864 0.0 0.0 314.15858155381085 0.0 314.15858155381085 0.0 5.4017461800021 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.3252574989159953 + HVDAAEK 2.4864 + + 380 + 1 3.953 67961.3 1.0 51 2368 2420 SUDHL4_400M_050219_1,2421 SUDHL4_400M_050219_1,2421,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2422 10.05 642.0 182370.0 25 0 13207.0 + 36058 SVQHVDAAEK 10 105 542.2751812260133 1082.5358095188265 2 542.2761718630791 MULTI CID FTMS 0 0 0 2420 109610.9375 0.0036315377888739 -14 0.0780906677246093 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 93.92789965120151 0.0090521134704859 5 SVQHVDAAEK 10 0 + 131.94 0.0 0.0 12.188 12.188 95.107 0.0 0.0 0.0 81.25737464369934 17.201140738196017 17.201140738196017 9.164539485499262 0 3.221848749616356 2.0 1.4604093769761874 0.805462187404089 + + SVQHVDAAEK;SV[AG]HVDAAEK;SVQHVADAEK;SV[AG]HVADAEK;SVQ{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}AEK;SVQ{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}AAEK;SVQ{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F}AEK;SV[AG]{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}AEK;SVQ{M(Oxidation (M))|F}QA{M(Oxidation (M))|F}EK;SV[AG]{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}AAEK 12.188;11.342;11.192;10.346;9.7095;9.6189;8.8589;8.8589;8.8146;8.7723 +;-;-;-;-;-;-;-;-;- + 2842 + 1 3.953 95203.5 1.0 52 2368 2420 SUDHL4_400M_050219_1,2422 SUDHL4_400M_050219_1,2422,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2426 10.075 800.0 73673.0 25 0 3306.4 + -1 NEQKVCTNN 9 95 553.7467983049953 0 553.7467529177666 PEAK CID FTMS 0 0 0 2425 42813.21484375 0.3578879672629407 -9 0.0719566345214843 1 Carbamidomethyl (C) _NEQKVC(Carbamidomethyl (C))TNN_ REV__ENSG00000137642|ENST00000260197|SORL1 41.8396318013385 0.053988301646488 5 QAE{M(Oxidation (M))|F}QS 6 -1 27.766 0.0 0.0 2.5117 0.0 0.0 260.1122067791408 152.04688440494377 412.15909118408456 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.2742275032520141 QAE{M(Oxidation (M))|F}QS 2.5117 - 134 + 1 3.953 50913.6 0.3799999952316284 53 2371 2425 SUDHL4_400M_050219_1,2426 SUDHL4_400M_050219_1,2426,NEQKVCTNN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2427 10.083 495.0 175610.0 25 0 23017.0 42838 VVLDNSGK 8 110 416.23223403001 830.4499151268201 2 416.2313415408134 MULTI CID FTMS 0 0 0 2425 104990.0 0.0129871897003013 -53 0.2746572494506836 2 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 15.847184025352805 0.6768015514314958 5 VVSPASSGK 9 4 + 54.663 0.0 0.0 6.5823 6.5823 93.911 0.0 0.0 0.0 38.45563917949255 9.239573281665486 9.239573281665486 16.65546248849069 0 0.805462187404089 2.0 0.0 0.2742275032520141 VVSPASSGK;VVSE{[NV]|[RG]}GK;VVSP[RH]H 6.5823;4.5767;4.5166 -;-;- 159 + 1 3.953 71799.8 1.0 54 2371 2425 SUDHL4_400M_050219_1,2427 SUDHL4_400M_050219_1,2427,VVLDNSGK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2428 10.097 800.0 63275.0 25 0 23265.0 + -1 CCRRFKPWSDF 11 31 779.8562436668678 0 779.8546630740166 PEAK CID FTMS 0 0 0 2425 94281.2734375 0.5591698692586293 69 -0.5822687149047852 3 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))RRFKPWSDF_ REV__ENST00000317147.9_1_16:58554618-58554681:-|nuORF 1.3295316138638542 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 43082.6 0.3799999952316284 55 2371 2425 SUDHL4_400M_050219_1,2428 SUDHL4_400M_050219_1,2428,CCRRFKPWSDF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2434 10.129 800.0 285880.0 25 0 21583.0 + + 40356 QHVDAAEK 8 147 449.2251848345129 896.4358167358258 2 449.2247802615166 MULTI CID FTMS 0 0 0 2433 148059.390625 0.2057127919919512 -7 0.0630350112915039 1 Unmodified _VHQEAGEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 61.357469665136826 0.1155423183535659 5 [AG]HVDAAEK 9 -1 + 81.988 0.0 0.0 9.146 9.146 87.623 0.0 0.0 0.0 62.77946318154324 20.28537168208721 20.28537168208721 1.7609125905568137 0 1.3472711111689564 1.0 1.2134679910804405 0.3807196863200844 [AG]HVDAAEK;[AG]HVADAEK;[AG]HVDAAG{[TV]|[{I|L}S]};[AG]HVADAG{[TV]|[{I|L}S]};[AG]HVDAQ{[TV]|[{I|L}S]};[AG]HVADQ{[TV]|[{I|L}S]};{[CP]|[EA]}K{[CT]|[{M(Oxidation (M))|F}G]}A{M(Oxidation (M))|F}K;[HQ][{I|L}A][DG]EK;[AG]EV[HQ]EK;{[DA]|[EG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AA{M(Oxidation (M))|F}K 9.146;8.9495;5.655;5.4586;4.8673;4.6709;2.7177;2.6322;2.6274;2.6019 -;-;-;-;-;-;-;-;-;- 740 + 1 3.953 176780.1 0.4699999988079071 56 2376 2433 SUDHL4_400M_050219_1,2434 SUDHL4_400M_050219_1,2434,VHQEAGEK False False QHVDAAEK 10.129397 449.224780261517 5004021.0 2433.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 6.389007727305095 2.0 False 8.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2437 10.149 800.0 212780.0 25 0 14143.0 + 12375 GTFVFNIDGGK 11 168 385.5318626814383 1153.573758644515 3 385.5318481326103 MULTI CID FTMS 0 0 0 2436 66630.53125 0.2706910548539973 -5 0.0319900512695312 1 Unmodified _GTFVFNIDGGK_ REV__ENSG00000103226|ENST00000399336|NOMO3;REV__ENSG00000103512|ENST00000287667|NOMO1;REV__ENSG00000185164|ENST00000622306|NOMO2;REV__nc|ENSG00000185164|Q5JPE7|NOMO2 10.799506525563784 0.8105043987015127 5 [VS]AQ{M(Oxidation (M))|F}AVH 8 -1 52.454 0.0 0.0 4.5471 0.0 0.0 0.0 311.1359831935037 311.1359831935037 35.58738746621688 0.0 0.0 0.0 0 0.7887254899964358 2.0 0.6764937264761693 0.0 [VS]AQ{M(Oxidation (M))|F}AVH 4.5471 - 941 1 3.953 136043.5 0.4699999988079071 57 2378 2436 SUDHL4_400M_050219_1,2437 SUDHL4_400M_050219_1,2437,GTFVFNIDGGK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2438 10.163 800.0 241950.0 25 0 16234.0 -1 GQTDMCRCSK 10 129 572.731503624923 1143.448454316646 2 572.7318603396416 MULTI CID FTMS 0 0 0 2436 121819.234375 0.215970130400409 -4 0.0281085968017578 2 Oxidation (M) _GQTDM(Oxidation (M))CRCSK_ ENSG00000118322|ENST00000327245|ATP10B 10.073929032068715 0.6785112666868882 5 HVDAAEK 7 -1 45.719 0.0 0.0 3.9984 0.0 0.0 375.07244081558935 0.0 375.07244081558935 0.0 20.354947097804263 0.0 0.0 0 0.0 0.0 0.5 0.3252574989159953 HVDAAEK 3.9984 - 1892 + 1 3.953 146422.3 0.5600000023841858 58 2378 2436 SUDHL4_400M_050219_1,2438 SUDHL4_400M_050219_1,2438,GQTDMCRCSK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2441 10.184 800.0 171840.0 25 0 10821.0 34595 SPHEAVGT 8 168 399.1929312779522 796.3713096227044 2 399.1927673220634 MULTI CID FTMS 0 0 0 2440 255466.0 1.0 0 0.0 1 Unmodified _SPHEAVGT_ ENST00000393473.6_1_2:99771434-99772854:+|nuORF 23.1484247019978 0.5573009939494978 5 VDAAEK 6 7 52.643 0.0 0.0 6.6104 0.0 0.0 165.05284031162768 0.0 165.05284031162768 0.0 40.860398026803736 0.0 0.0 0 2.1989700043360187 0.0 0.8807196863200843 0.3252574989159953 VDAAEK 6.6104 - 236 + 1 3.953 109006.5 0.8399999737739563 59 2380 2440 SUDHL4_400M_050219_1,2441 SUDHL4_400M_050219_1,2441,SPHEAVGT False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2442 10.198 800.0 76973.0 25 0 3593.4 32828 SEGEAEEEEK 10 106 568.731418679847 1135.448284426494 2 569.2334472537041 MULTI CID FTMS 0 0 0 2440 93708.1328125 0.747878054630838 -3 0.0374422073364257 2 Unmodified _SEGEAEEEEK_ ENSG00000277586|ENST00000610854|NEFL 13.042465956692816 0.6287021003332052 5 AAEK 4 7 31.402 0.0 0.0 2.7656 0.0 0.0 718.225369219124 0.0 718.225369219124 0.0 5.428418131619992 0.0 0.0 0 0.0 0.0 0.5 0.3494850021680094 AAEK 2.7656 - 94 + 1 3.953 51376.8 0.6700000166893005 60 2380 2440 SUDHL4_400M_050219_1,2442 SUDHL4_400M_050219_1,2442,SEGEAEEEEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2444 10.217 800.0 87755.0 25 0 4184.1 + 6314 DVHLWIDEK 9 91 577.7938714314232 1153.5731899296463 2 577.7934448122978 MULTI CID FTMS 0 0 0 2443 103950.1796875 0.9354325176270332 -1 0.031071662902832 1 Unmodified _DVHLWIDEK_ REV__ENSG00000132437|ENST00000444124|DDC;REV__nc|ENSG00000132437|P20711-2|DDC;REV__nc|ENSG00000132437|P20711-3|DDC;REV__nc|ENSG00000132437|P20711-4|DDC 25.399314129420983 0.2080152500878129 5 [VS]QHVDAAAEK 11 -1 + 125.94 0.0 0.0 10.917 10.917 94.645 0.0 0.0 0.0 73.08092317009785 16.804560644581315 16.804560644581315 9.128498242811006 0 3.2856668758921828 2.0 1.2059771852360797 0.7614393726401688 [VS]QHVDAAAEK;[VS][AG]HVDAAAEK;[VS]AGHVDAAAEK;[VS]AGHVD[VG]GEK;[VS]AGHVD[VG]EGK;[VS]AGHV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AEK;WQH{[RE]|[WV]}AAEK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AAEK;[VS]QHVD[VG]GEK;[VS]QHVD[VG]EGK 10.917;10.126;8.295;7.4712;7.4022;7.3117;6.9637;6.6664;6.6333;6.5642 -;-;-;-;-;-;-;-;-;- 2297 + 1 3.953 57456.1 0.4199999868869781 61 2381 2443 SUDHL4_400M_050219_1,2444 SUDHL4_400M_050219_1,2444,DVHLWIDEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2446 10.235 800.0 20458.0 25 0 2837.8 + -1 VSHQNTCKCDK 11 33 660.2934448122978 0 660.2934448122978 PEAK CID FTMS 0 0 0 -1 0 1 Carbamidomethyl (C) _VSHQNTC(Carbamidomethyl (C))KCDK_ REV__LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|29|3|sense 2.498486711656943 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 23157.9 0.3499999940395355 62 2382 2445 SUDHL4_400M_050219_1,2446 SUDHL4_400M_050219_1,2446,VSHQNTCKCDK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2448 10.253 800.0 150490.0 25 0 5637.1 -1 WEQYMDEK 8 183 382.1584679123768 1143.4535743373303 3 382.1590759158134 MULTI CID FTMS 0 0 0 2447 91711.609375 1.0 0 0.0 1 Oxidation (M) _WEQYM(Oxidation (M))DEK_ ENSG00000102904|ENST00000561639|TSNAXIP1;ENST00000466164.5_1_16:67859786-67861893:+|nuORF;ENST00000568990.5_1_16:67859786-67861893:+|nuORF;ENST00000569504.5_1_16:67859786-67861483:+|nuORF;nc|ENSG00000102904|Q2TAA8-2|TSNAXIP1;nc|ENSG00000102904|Q2TAA8|TSNAXIP1 6.2057823575117 0.7866635192979977 5 VDAAEK 6 -1 21.776 0.0 0.0 1.9044 0.0 0.0 512.1334974084011 0.0 512.1334974084011 0.0 -0.2308808725165789 -0.2308808725165789 0.0 0 0.0 0.0 0.4247425010840047 0.2614393726401688 VDAAEK 1.9044 - 159 + 1 3.953 97261.0 0.3899999856948852 63 2383 2447 SUDHL4_400M_050219_1,2448 SUDHL4_400M_050219_1,2448,WEQYMDEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2449 10.267 800.0 48196.0 25 0 28331.0 -1 CVYVYVYMC 9 39 636.7589250541766 0 636.7588378787041 PEAK CID FTMS 0 0 0 2447 78407.625 0.4515190587549342 -11 0.1374416351318359 2 2 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))VYVYVYM(Oxidation (M))C(Carbamidomethyl (C))_ ENST00000433544.1_1_1:94219339-94219483:-|nuORF 0.6014990680409731 0.3444685223463735 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.953 36574.6 0.3799999952316284 64 2383 2447 SUDHL4_400M_050219_1,2449 SUDHL4_400M_050219_1,2449,CVYVYVYMC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2451 10.276 298.0 258780.0 25 0 23017.0 37147 THPDQAEK 8 88 463.2224425557482 924.4303321782965 2 463.2217285037041 MULTI CID FTMS 0 0 0 2450 217968.546875 0.4539733115512722 5 -0.0792369842529296 1 Unmodified _THPDQAEK_ ENST00000546949.5_1_19:58514261-58515786:+|nuORF 30.63653989081413 0.3996269429323407 5 HVDAAEK 7 3 53.215 0.0 0.0 5.7565 0.0 0.0 156.05409478017526 0.0 156.05409478017526 0.0 39.19092897639623 0.0 0.0 0 1.960409376976188 0.0 0.3494850021680094 0.3494850021680094 HVDAAEK 5.7565 - 128 + 1 3.738 66968.8 1.0 65 2384 2450 SUDHL4_400M_050219_1,2451 SUDHL4_400M_050219_1,2451,THPDQAEK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2452 10.29 800.0 39129.0 25 0 1400.1 -1 0 39 860.0536565682368 0 860.0530883669853 PEAK CID FTMS 0 0 0 2450 68571.1484375 1.0 0 0.0 2 5 A 1 -1 5.4846 0.0 0.0 0.31922 0.0 0.0 1024.8068848144046 619.2119845025999 1644.0188693170044 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.31922 - 7 + 1 3.738 29451.7 0.3499999940395355 66 2384 2450 SUDHL4_400M_050219_1,2452 SUDHL4_400M_050219_1,2452, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2454 10.294 1.7 32034000.0 25 0 5805900.0 + 36055 SVQHVDAAEK 10 73 361.8525316454098 1082.5357655364296 3 361.8528015017509 MULTI CID FTMS 0 0 0 2453 34366580.0 0.6667722898722945 3 -0.0525979995727539 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 5 [WQ]HVWAEK 8 4 + 48.863 0.0 0.0 4.5137 4.5137 87.865 0.0 0.0 0.0 5.440680443502757 15.728724228771 5.440680443502757 15.728724228771 0 0.0 0.0 0.3494850021680094 0.3252574989159953 [WQ]HVWAEK;[VS]AG{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T][KG];[VS]AG{M(Oxidation (M))|F}AA[Y{I|L}][KG];[WK]HVA{[CT]|[{M(Oxidation (M))|F}G]}A[PA] 4.5137;3.0608;2.7827;1.4654 -;-;-;- 356 + 1 3.738 52681.7 1.0 67 2385 2453 SUDHL4_400M_050219_1,2454 SUDHL4_400M_050219_1,2454,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2455 10.309 800.0 91422.0 25 0 8130.4 + + 24213 MAHMASKE 8 112 452.7047488047007 903.3949446762014 2 452.7045165896416 MULTI CID FTMS 0 0 0 2453 84209.515625 0.8380640680825231 -6 0.126652717590332 2 Unmodified _MAHVFDGQ_ ENST00000432206.1_1_20:13373901-13374318:+|nuORF;ENST00000447427.2_1_1:120101380-120101404:-|nuORF;nc|ENSG00000111640|P04406-2|GAPDH;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;ENSG00000111640|ENST00000229239|GAPDH;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 24.020572477871973 0.5389365498350341 5 {[DS]|[MA]|[CV]|TT}HMASKE 8 -1 + 71.764 0.0 0.0 7.9439 7.9439 95.811 0.0 0.0 0.0 22.21848749616356 12.75871824245884 12.75871824245884 12.75871824245884 0 1.4489700043360187 1.5228787452803376 0.2215141619232908 0.4247425010840047 {[DS]|[MA]|[CV]|TT}HMASKE;{[DS]|[MA]|[CV]|TT}HMASEK;{[DS]|[MA]|[CV]|TT}HMAS{[SA]|[TG]}V;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}KS{[CA]|SS}{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}H[QP]{[CA]|SS}{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}HW{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}K{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}H[TA][{M(Oxidation (M))|F}V]Q;{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}C[HK][PA];{[DS]|[MA]|[CV]|TT}H[VG]{[{M(Oxidation (M))|F}D]|MM}Q 7.9439;6.5316;5.0087;4.5268;3.7277;3.4168;2.877;2.8422;2.8361;2.7349 -;-;-;-;-;-;-;-;-;- 365 + 1 3.738 64144.4 0.4000000059604645 68 2385 2453 SUDHL4_400M_050219_1,2455 SUDHL4_400M_050219_1,2455,MAHVFDGQ False False MAHMASKE 10.30855 452.704516589642 556854.375 2453.0 ENST00000432206.1_1_20:13373901-13374318:+|nuORF;;ENST00000447427.2_1_1:120101380-120101404:-|nuORF;;nc|ENSG00000111640|P04406-2|GAPDH;;ENST00000405405.2_1_6:80662724-80663060:-|nuORF;;ENSG00000111640|ENST00000229239|GAPDH;;ENST00000452570.1_1_X:39646388-39646742:-|nuORF;;ENST00000466525.1_1_12:6646524-6647333:+|nuORF 8.84209950764974 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2456 10.322 800.0 190090.0 25 0 122430.0 + -1 VGAHCMYVYAV 11 47 614.7770522300566 0 614.7761718630791 PEAK CID FTMS 0 0 0 2453 193830.890625 0.3433386879196878 77 -0.4681291580200195 3 Oxidation (M) _VGAHCM(Oxidation (M))YVYAV_ REV__L1PA3_dup5653|chr8:134272831-134273084:+|6.651383941580287|0.0005263323012381|13.63|48.0|12|2|anti-sense 1.4819007175156935 0.4761840153648598 5 M 1 -1 3.9794 0.0 0.0 0.32418 0.0 0.0 649.1618182278881 444.3133944147094 1093.4752126425976 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.32418 + + 2 + 1 3.738 115831.4 0.6299999952316284 69 2385 2453 SUDHL4_400M_050219_1,2456 SUDHL4_400M_050219_1,2456,VGAHCMYVYAV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2458 10.327 4.2 11911000.0 25 0 986480.0 + 36059 SVQHVDAAEK 10 78 542.2751812260133 1082.5358095188265 2 542.2756835818291 MULTI CID FTMS 0 0 0 2457 13514011.0 0.4477348953042011 4 -0.0277585983276367 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 66.61675797227278 0.0192292371508206 5 [VS]QHVDAAEK 10 0 + 107.18 0.0 0.0 9.9006 9.9006 93.99 0.0 0.0 0.0 8.815296789017196 8.815296789017196 8.815296789017196 8.815296789017196 0 2.9291746928241125 2.0 0.4247425010840047 0.805462187404089 + + [VS]QHVDAAEK;[VS]AGHVDAAEK;[VS][AG]HVDAAEK;WQHVWAEK;[VS]AGHVD[DV]GK;W[AG]HVWAEK;[VS]QHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVWAEK;{[QV]|[N{I|L}]|[RA]|[KV]}SHVDAAEK 9.9006;9.0862;9.054;8.191;7.4443;7.3354;6.8483;6.6797;5.962;5.9104 +;-;-;-;-;-;-;-;-;- + 926 + 1 3.738 46896.2 1.0 70 2386 2457 SUDHL4_400M_050219_1,2458 SUDHL4_400M_050219_1,2458,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2459 10.338 629.0 112370.0 25 0 13447.0 -1 ENQEMALEK 9 115 554.2522327280074 1106.4899125228146 2 554.2525512576103 MULTI CID FTMS 0 0 0 2457 81497.046875 0.5470538989281298 4 -0.0277585983276367 2 Oxidation (M) _ENQEM(Oxidation (M))ALEK_ ENSG00000138892|ENST00000433387|TTLL8;nc|ENSG00000138892|A6PVC2-2|TTLL8;nc|ENSG00000138892|A6PVC2|TTLL8 27.628801355627647 0.1796483985696185 5 NQADDAAEK 9 -1 37.986 0.0 0.0 3.433 0.0 0.0 146.0798305909771 0.0 146.0798305909771 0.0 -3.337811941574877 -3.337811941574877 0.0 0 1.1549471895720984 0.0 0.5 0.3054621874040891 NQADDAAEK 3.433 - 2548 + 1 3.738 58123.7 1.0 71 2386 2457 SUDHL4_400M_050219_1,2459 SUDHL4_400M_050219_1,2459,ENQEMALEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2461 10.342 20.0 2519000.0 25 0 478230.0 42839 VVLDNSGK 8 67 416.23223403001 830.4499151268201 2 416.2321960330009 MULTI CID FTMS 0 0 0 2460 3161511.75 0.391076796237562 -37 0.4121246337890625 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 21.74664581756881 0.5868176546531598 5 VVSPASSGK 9 4 + 71.781 0.0 0.0 8.6437 8.6437 98.944 0.0 0.0 0.0 46.5600930837541 11.075543018713816 11.075543018713816 71.78125037489593 0 0.9247425010840048 2.0 0.4247425010840047 0.3494850021680094 VVSPASSGK 8.6437 - 93 + 1 3.738 44995.3 1.0 72 2387 2460 SUDHL4_400M_050219_1,2461 SUDHL4_400M_050219_1,2461,VVLDNSGK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2469 10.375 373.0 243430.0 25 0 39317.0 + -1 IQRLETMK 8 86 517.786882249318 1033.5592115654358 2 517.7869750857353 MULTI CID FTMS 0 0 0 2468 197196.3125 0.0965015691891447 -43 0.4360332489013672 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 32.30548876998284 0.3644845974844379 5 T{M(Oxidation (M))|F}K 3 -1 37.237 0.0 0.0 3.6028 0.0 0.0 639.3701684519577 0.0 639.3701684519577 0.0 8.573777260176243 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.25 T{M(Oxidation (M))|F}K 3.6028 + + 419 + 1 3.738 74275.2 1.0 73 2394 2468 SUDHL4_400M_050219_1,2469 SUDHL4_400M_050219_1,2469,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2470 10.389 800.0 277500.0 25 0 18297.0 + 29271 QHVAAEDK 8 157 449.2251848345129 896.4358167358258 2 449.2249938845634 MULTI CID FTMS 0 0 0 2468 110103.328125 0.1529768759724671 11 -0.0952091217041015 2 Unmodified _QHVAAEDK_ REV__ENSG00000065970|ENST00000162391|FOXJ2;REV__nc|ENSG00000065970|Q9P0K8-2|FOXJ2 62.57269311338072 0.1158273023829763 5 [AG]HVDAAEK 9 -1 + 76.575 0.0 0.0 8.5422 8.5422 87.227 0.0 0.0 0.0 52.54666838107492 23.02764671460736 23.02764671460736 1.7609125905568137 0 1.0400990676322908 1.0457574905606752 0.9604093769761874 0.6549471895720985 [AG]HVDAAEK;[AG]HVADAEK;[AG]HVDAAG{[TV]|[{I|L}S]};[AG]HVDAQ{[TV]|[{I|L}S]};[AG]HVADAG{[TV]|[{I|L}S]};[AG]HVADQ{[TV]|[{I|L}S]};[VG]T{[CT]|[{M(Oxidation (M))|F}G]}AA{M(Oxidation (M))|F}K;[AG]HVD[KS]SP;[VS]A{[CT]|[{M(Oxidation (M))|F}G]}AA{M(Oxidation (M))|F}K;{[DA]|[EG]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AA{M(Oxidation (M))|F}K 8.5422;8.3457;4.82;4.679;4.6235;4.4825;3.9881;3.4553;3.0355;2.3614 -;-;-;-;-;-;-;-;-;- 963 + 1 3.738 173538.2 0.6100000143051147 74 2394 2468 SUDHL4_400M_050219_1,2470 SUDHL4_400M_050219_1,2470,QHVAAEDK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2471 10.402 800.0 51288.0 25 0 20047.0 -1 YMCYPCHHIFC 11 54 510.86228914163576 0 510.8625671267509 PEAK CID FTMS 0 0 0 2468 109865.4921875 1.0 0 0.0 3 2 Carbamidomethyl (C) _YMC(Carbamidomethyl (C))YPCHHIFC(Carbamidomethyl (C))_ ENSG00000164197|ENST00000389100|RNF180 0.0948413911109767 0.4761840153648598 5 Y 1 -1 6.9897 0.0 0.0 0.68546 0.0 0.0 580.5849775979216 273.03009973697505 853.6150773348966 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.68546 + + 8 + 1 3.738 44934.2 0.6000000238418579 75 2394 2468 SUDHL4_400M_050219_1,2471 SUDHL4_400M_050219_1,2471,YMCYPCHHIFC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2477 10.429 353.0 203120.0 25 0 15364.0 + 34587 SPHEAAVS 8 104 399.1929312779522 796.3713096227044 2 399.1931640505791 MULTI CID FTMS 0 0 0 2476 191177.0 0.7483461595672223 19 -0.100529670715332 1 Unmodified _SPHEAAVS_ REV__ENST00000488290.5_1_10:30602540-30654262:-|nuORF;REV__nc|ENSG00000107951|Q9NVV4-2|MTPAP 12.531546534597751 0.7257836412119636 5 VDAAEK 6 -1 51.394 0.0 0.0 6.4535 0.0 0.0 165.05320767133566 0.0 165.05320767133566 0.0 41.11616063904064 0.0 0.0 0 2.1989700043360187 0.0 0.8807196863200843 0.3252574989159953 VDAAEK 6.4535 - 69 + 1 3.738 65093.4 1.0 76 2399 2476 SUDHL4_400M_050219_1,2477 SUDHL4_400M_050219_1,2477,SPHEAAVS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2483 10.461 800.0 83448.0 25 0 5070.6 -1 DQVTDMMIAN 10 107 577.2472457112198 1152.4799384892394 2 577.2468139529228 MULTI CID FTMS 0 0 0 2482 78306.3984375 0.2148956547131292 -29 0.3353519439697265 1 Oxidation (M) _DQVTDM(Oxidation (M))MIAN_ ENSG00000124171|ENST00000371610|PARD6B;ENSG00000178184|ENST00000353265|PARD6G 12.240655878213236 0.6421556946785427 5 [AG]N[HN]EAQQ 9 -1 46.076 0.0 0.0 3.998 0.0 0.0 0.0 200.07201547582068 200.07201547582068 33.41193519566044 0.0 0.0 0.0 0 0.7302046884880938 2.0 0.3807196863200844 0.3252574989159953 [AG]N[HN]EAQQ 3.998 - 436 1 3.738 51675.3 0.4099999964237213 77 2404 2482 SUDHL4_400M_050219_1,2483 SUDHL4_400M_050219_1,2483,DQVTDMMIAN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2497 10.519 417.0 210670.0 25 0 26470.0 12524 GVGHRDARW 9 118 351.8489543520276 0 351.8490783572197 PEAK CID FTMS 0 0 0 2496 112680.734375 0.7702508731262325 -3 0.0120983123779296 1 Unmodified _GVGHRDARW_ ENST00000587840.5_1_19:10790574-10791040:+|nuORF 12.531546534597751 0.2832320739326029 5 VDA 3 6 11.427 0.0 0.0 1.6285 0.0 0.0 70.36483450100987 343.16120325260005 413.5260377536099 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VDA 1.6285 - 65 + 1 3.738 78852.8 1.0 78 2417 2496 SUDHL4_400M_050219_1,2497 SUDHL4_400M_050219_1,2497,GVGHRDARW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2505 10.548 18.0 2677700.0 25 0 452040.0 + 36056 SVQHVDAAEK 10 75 361.8525316454098 1082.5357655364296 3 361.8524352908134 MULTI CID FTMS 0 0 0 2504 2728433.5 0.0529364240654519 42 -0.2469434738159179 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 5 HVDAAEK 7 3 48.325 0.0 0.0 4.464 0.0 0.0 314.1595241397527 0.0 314.1595241397527 0.0 22.338942739842253 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.2742275032520141 + HVDAAEK 4.464 + + 313 + 1 3.738 45941.9 1.0 79 2424 2504 SUDHL4_400M_050219_1,2505 SUDHL4_400M_050219_1,2505,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2509 10.565 369.0 263620.0 25 0 22697.0 -1 0 112 374.1840947914176 373.1768183248177 1 374.1817199587822 MULTI CID FTMS 0 0 0 2508 112740.7890625 0.4629312305539043 -44 0.3211889266967773 1 5 QH 2 -1 17.959 0.0 0.0 4.8124 0.0 0.0 90.05072219062656 0.0 90.05072219062656 0.0 2.4742501084004687 0.0 0.0 0 0.0 0.0 0.0 0.0 QH 4.8124 - 12 1 3.738 79160.2 1.0 80 2427 2508 SUDHL4_400M_050219_1,2509 SUDHL4_400M_050219_1,2509, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2514 10.582 54.0 1017500.0 25 0 83941.0 + 36060 SVQHVDAAEK 10 74 542.2751812260133 1082.5358095188265 2 542.2753173708916 MULTI CID FTMS 0 0 0 2513 1149662.125 0.0380896427546255 49 -0.3136272430419922 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 5 [VS]QHVDAAEK 10 0 + 109.54 0.0 0.0 10.118 10.118 94.914 0.0 0.0 0.0 83.22682509756042 18.081597033474424 18.081597033474424 9.164539485499262 0 2.885151878060192 2.0 0.8807196863200843 0.805462187404089 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVWAAW;[VS]AGHVDAAA[VS];[VS]QHVWAAW;[VS]QHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]A[RH]WAAW;[VS]AGHVD{[NV]|[RG]}[VS] 10.118;9.2719;8.1213;7.9591;7.2175;7.0479;6.4818;6.1435;5.859;5.7471 +;-;-;-;-;-;-;-;-;- + 856 + 1 3.738 47464.7 1.0 81 2431 2513 SUDHL4_400M_050219_1,2514 SUDHL4_400M_050219_1,2514,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2518 10.595 8.0 5845400.0 25 0 1209100.0 42840 VVLDNSGK 8 58 416.23223403001 830.4499151268201 2 416.2322265505791 MULTI CID FTMS 0 0 0 2517 7363491.0 0.9108586958135207 10 -0.0667057037353515 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 23.1484247019978 0.5573009939494978 5 VVSPASS[KG] 9 4 + 68.65 0.0 0.0 8.2666 8.2666 98.574 0.0 0.0 0.0 47.67606240177031 6.127042801912879 6.127042801912879 68.65024697793565 0 0.805462187404089 2.0 0.4247425010840047 0.3494850021680094 VVSPASS[KG] 8.2666 - 84 + 1 3.738 40827.4 1.0 82 2434 2517 SUDHL4_400M_050219_1,2518 SUDHL4_400M_050219_1,2518,VVLDNSGK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2522 10.618 710.0 141470.0 25 0 9050.3 + 30446 RDSFSAEK 8 125 470.2303395851482 938.4461262370965 2 470.2301513552666 MULTI CID FTMS 0 0 0 2521 96960.078125 0.0625364459046231 -27 0.1219100952148437 1 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 24.020572477871973 0.5389365498350341 5 HVDAAEK 7 -1 66.489 0.0 0.0 7.085 0.0 0.0 170.06990526304395 0.0 170.06990526304395 0.0 37.85113201697349 0.0 0.0 0 2.504432191740108 0.0 0.4247425010840047 0.3252574989159953 HVDAAEK 7.085 - 368 + 1 3.738 81260.8 1.0 83 2437 2521 SUDHL4_400M_050219_1,2522 SUDHL4_400M_050219_1,2522,RDSFSAEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2525 10.626 35.0 1899200.0 25 0 359640.0 + -1 MKTIPRTAT 9 67 517.786882249318 1033.5592115654358 2 517.7870361208916 MULTI CID FTMS 0 0 0 2524 1743421.5 0.8531747291577395 2 -0.0230398178100585 1 Oxidation (M) _M(Oxidation (M))KTIPRTAT_ REV__ENSG00000158636|ENST00000695367|EMSY;REV__ENST00000531641.1_1_11:76237526-76255878:+|nuORF;REV__nc|ENSG00000158636|Q7Z589-2|EMSY;REV__nc|ENSG00000158636|Q7Z589-4|EMSY;REV__nc|ENSG00000158636|Q7Z589-5|EMSY;REV__nc|ENSG00000158636|Q7Z589-6|EMSY;REV__nc|ENSG00000158636|Q7Z589|EMSY 5.731851221503515 0.7145881442174411 5 KT[RH][WP]K 7 -1 18.914 0.0 0.0 1.83 0.0 0.0 82.00909845407075 0.0 82.00909845407075 0.0 11.92477368590093 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.2215141619232908 KT[RH][WP]K 1.83 - 31 + 1 3.738 57586.9 1.0 84 2439 2524 SUDHL4_400M_050219_1,2525 SUDHL4_400M_050219_1,2525,MKTIPRTAT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2526 10.64 800.0 34573.0 25 0 1737.5 -1 0 45 742.1344756704291 0 742.1324951052666 PEAK CID FTMS 0 0 0 2524 66376.75 1.0 0 0.0 2 5 AT 2 -1 10.238 0.0 0.0 0.69074 0.0 0.0 472.8470995431946 834.2913912408811 1307.1384907840757 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 AT 0.69074 - 5 + 1 3.738 29571.0 0.3400000035762787 85 2439 2524 SUDHL4_400M_050219_1,2526 SUDHL4_400M_050219_1,2526, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2540 10.698 385.0 273370.0 25 0 78338.0 27675 PLIFYVPGRT 10 100 388.2254030990201 1161.6543798972605 3 388.2270385622978 MULTI CID FTMS 0 0 0 2539 88871.453125 0.0806038004111298 -26 0.1370134353637695 1 Unmodified _PLIFYVPGRT_ ENSG00000010404|ENST00000340855|IDS 10.823927491677226 0.6659270209832991 5 [{I|L}P][NP]T{I|L}P 7 7 22.457 0.0 0.0 1.9332 0.0 0.0 0.0 426.2113381648924 426.2113381648924 8.821866644214039 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 [{I|L}P][NP]T{I|L}P 1.9332 - 103 1 3.738 91257.7 1.0 86 2452 2539 SUDHL4_400M_050219_1,2540 SUDHL4_400M_050219_1,2540,PLIFYVPGRT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2543 10.715 568.0 96336.0 25 0 6147.9 -1 DQVTDMMIAN 10 96 577.2472457112198 1152.4799384892394 2 577.2477905154228 MULTI CID FTMS 0 0 0 2542 142357.5 0.3906706064414545 21 -0.1686334609985351 1 Oxidation (M) _DQVTDM(Oxidation (M))MIAN_ ENSG00000124171|ENST00000371610|PARD6B;ENSG00000178184|ENST00000353265|PARD6G 12.240655878213236 0.6421556946785427 5 [AG]N[HN]EAQQ 9 -1 37.651 0.0 0.0 3.2669 0.0 0.0 0.0 200.07787485082068 200.07787485082068 28.227017364394595 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.3054621874040891 [AG]N[HN]EAQQ 3.2669 - 288 1 3.738 47787.0 1.0 87 2454 2542 SUDHL4_400M_050219_1,2543 SUDHL4_400M_050219_1,2543,DQVTDMMIAN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2551 10.744 58.0 956310.0 25 0 177040.0 + 28192 PQDESISFQQR 11 71 445.550904815088 1333.630885045464 3 445.5509521365166 MULTI CID FTMS 0 0 0 2550 566117.125 0.0513902101933088 -19 0.0903787612915039 1 Unmodified _PQDESISFQQR_ REV__ENSG00000169184|ENST00000302326|MN1 10.799506525563784 0.8105043987015127 5 NT{M(Oxidation (M))|F}QR 5 -1 29.565 0.0 0.0 2.2169 0.0 0.0 669.3032181828418 0.0 669.3032181828418 0.0 15.747878813852656 0.0 0.0 0 0.0 0.0 0.0 0.841885676953819 NT{M(Oxidation (M))|F}QR 2.2169 - 133 + 1 3.738 49711.3 1.0 88 2461 2550 SUDHL4_400M_050219_1,2551 SUDHL4_400M_050219_1,2551,PQDESISFQQR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2552 10.758 800.0 153510.0 25 0 37123.0 10717 FWTSFIFCQR 10 59 667.8228152982242 1333.6310776632483 2 667.8228637576103 MULTI CID FTMS 0 0 0 2550 88767.59375 0.0459112201268514 -19 0.0903787612915039 2 Unmodified _FWTSFIFCQR_ ENST00000299505.6_1_19:34791118-34791184:+|nuORF 5.296884461304476 0.7021353017287152 5 TAM 3 9 21.911 0.0 0.0 1.643 0.0 0.0 1012.4800892560562 0.0 1012.4800892560562 0.0 2.619478172486467 0.0 0.0 0 0.0 0.0 0.5 0.0 TAM 1.643 - 17 1 3.738 91881.0 0.3799999952316284 89 2461 2550 SUDHL4_400M_050219_1,2552 SUDHL4_400M_050219_1,2552,FWTSFIFCQR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2556 10.772 195.0 413510.0 25 0 15465.0 + 34950 SQKPVMVKR 9 99 358.21448593280417 1071.6216283986123 3 358.2144348025322 MULTI CID FTMS 0 0 0 2555 255803.359375 0.5061929221732419 -4 0.0309476852416992 1 Unmodified _SQKPVMVKR_ ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF 24.99096001346401 0.2132109383330889 5 {[QS]|[NT]}KPVMVKR 9 0 + 62.669 0.0 0.0 5.848 5.848 93.567 0.0 0.0 0.0 58.68948444925195 14.973024840566469 14.973024840566469 62.668884535972325 0 0.805462187404089 0.0 0.0 0.0 + + {[QS]|[NT]}KPVMVKR 5.848 + + 51 + 1 3.738 70589.0 1.0 90 2464 2555 SUDHL4_400M_050219_1,2556 SUDHL4_400M_050219_1,2556,SQKPVMVKR False True SQKPVMVKR 10.771897 358.214434802532 1861719.71875 2555.0 ENSG00000108107|ENST00000344063|RPL28;;ENST00000560583.5_1_19:55899571-55899697:+|nuORF;;ENST00000412461.2_1_22:19043875-19044022:+|nuORF 5.1734011967976885 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2557 10.786 800.0 117520.0 25 0 14602.0 -1 VEKLRDMKK 9 86 581.8344792529931 1161.654405572786 2 581.8340942263603 MULTI CID FTMS 0 0 0 2555 84263.875 0.4982084263548031 -14 0.085062026977539 2 Oxidation (M) _VEKLRDM(Oxidation (M))KK_ ENSG00000111249|ENST00000261726|CUX2 24.99096001346401 0.2132109383330889 5 T{M(Oxidation (M))|F}KK 4 -1 46.67 0.0 0.0 4.0176 0.0 0.0 639.3690888219659 0.0 639.3690888219659 0.0 27.73001272063737 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}KK 4.0176 - 117 1 3.738 73350.2 0.4399999976158142 91 2464 2555 SUDHL4_400M_050219_1,2557 SUDHL4_400M_050219_1,2557,VEKLRDMKK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2561 10.799 137.0 442280.0 25 0 53215.0 + 36057 SVQHVDAAEK 10 100 361.8525316454098 1082.5357655364296 3 361.8524352908134 MULTI CID FTMS 0 0 0 2560 262389.3125 0.0050908156334916 85 -0.6420764923095703 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 5 HVDAAEK 7 3 32.944 0.0 0.0 3.0432 0.0 0.0 314.15947431007345 0.0 314.15947431007345 0.0 5.988897423716111 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3054621874040891 + HVDAAEK 3.0432 + + 421 + 1 3.738 54319.3 1.0 92 2467 2560 SUDHL4_400M_050219_1,2561 SUDHL4_400M_050219_1,2561,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2565 10.814 253.0 344620.0 25 0 42629.0 -1 0 92 374.1840947914176 373.1768183248177 1 374.1816284060478 MULTI CID FTMS 0 0 0 2564 207658.75 0.852679154298744 -1 0.0041122436523437 1 5 [HA]{M(Oxidation (M))|F} 3 -1 + 15.686 0.0 0.0 4.2035 4.2035 86.853 0.0 0.0 0.0 1.0822685886482493 13.212112250009657 1.0822685886482493 15.686362358410124 0 0.0 0.0 0.0 0.0 [HA]{M(Oxidation (M))|F} 4.2035 - 6 + 1 3.738 72055.1 1.0 93 2470 2564 SUDHL4_400M_050219_1,2565 SUDHL4_400M_050219_1,2565, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2568 10.831 582.0 195120.0 25 0 73149.0 40067 VGGVLNRT 8 118 408.2408793481959 0 408.2412597537041 PEAK CID FTMS 0 0 0 2567 119313.8046875 0.6684161921964401 92 -0.6658344268798828 1 Unmodified _VGGVLNRT_ ENST00000442740.1_2_3:48475374-48481489:-|nuORF 5.230669730166228 0.5807325378471833 5 {M(Oxidation (M))|F} 1 8 2.4743 0.0 0.0 0.30379 0.0 0.0 424.2849985872137 240.12435327701408 664.4093518642278 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.30379 - 6 + 1 3.738 93989.9 1.0 94 2472 2567 SUDHL4_400M_050219_1,2568 SUDHL4_400M_050219_1,2568,VGGVLNRT False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2569 10.834 157.0 544330.0 25 0 108290.0 -1 GALRCNGD 8 75 431.6954154451785 861.3762779571571 2 431.6954223513603 MULTI CID FTMS 0 0 0 2567 337230.59375 0.1235088696191349 -41 0.2414407730102539 2 Carbamidomethyl (C) _GALRC(Carbamidomethyl (C))NGD_ ENSG00000070018|ENST00000261349|LRP6;ENST00000540415.1_1_12:12283717-12288148:-|nuORF 5.230669730166228 0.792582437072536 5 D[WR]RDD 6 -1 + 31.274 0.0 0.0 3.6307 3.6307 86.607 0.0 0.0 0.0 10.515384402724592 6.057070101506135 6.057070101506135 31.273595242426744 0 0.805462187404089 0.0 0.4247425010840047 0.0 D[WR]RDD 3.6307 - 19 + 1 3.738 71610.7 1.0 95 2472 2567 SUDHL4_400M_050219_1,2569 SUDHL4_400M_050219_1,2569,GALRCNGD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2571 10.848 564.0 126580.0 25 0 10249.0 + 36061 SVQHVDAAEK 10 90 542.2752307243197 1082.5359085154394 2 542.2751953005791 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 81.92315094803507 0.0154917182261583 5 [VS]QHVDAAEK 10 0 + 115.12 0.0 0.0 10.634 10.634 94.967 0.0 0.0 0.0 14.832081621466044 14.832081621466044 14.832081621466044 9.164539485499262 0 3.2658715643802765 2.0 0.8494850021680094 0.7134679910804405 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]QHVADAEK;[VS]AGHVDAAEK;[VS][AG]HVADAEK;[VS]QHVD[DV]GK;[VS]AGHVD[DV]GK;[VS]AGHVDAAA[VS];[VS][AG]HVD[DV]GK;[VS]QHVAEEGK 10.634;9.7878;9.6386;9.2643;8.792;8.4074;7.8195;7.7912;7.5608;7.4116 +;-;-;-;-;-;-;-;-;- + 1700 + 1 3.738 58686.0 1.0 96 2473 2570 SUDHL4_400M_050219_1,2571 SUDHL4_400M_050219_1,2571,SVQHVDAAEK True True SVQHVDAAEK 10.847926 542.275195300579 1382495936.0 2570.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 11.462292671203612 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2572 10.862 800.0 82338.0 25 0 12057.0 + 34951 SQKPVMVKR 9 77 536.8182807469392 1071.6220085606783 2 536.8178588747978 MULTI CID FTMS 0 0 0 2570 93815.7734375 1.0 0 0.0 2 Unmodified _SQKPVMVKR_ ENSG00000108107|ENST00000344063|RPL28;ENST00000412461.2_1_22:19043875-19044022:+|nuORF;ENST00000560583.5_1_19:55899571-55899697:+|nuORF 32.78568957990786 0.1150597335874693 5 {[QS]|[NT]}KPV 5 4 25.956 0.0 0.0 2.4221 0.0 0.0 0.0 529.2910250299436 529.2910250299436 10.471062485323516 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 + {[QS]|[NT]}KPV 2.4221 + + 28 + 1 3.738 56080.6 0.4300000071525574 97 2473 2570 SUDHL4_400M_050219_1,2572 SUDHL4_400M_050219_1,2572,SQKPVMVKR True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2574 10.867 87.0 659410.0 25 0 62704.0 + 30447 RDSFSAEK 8 79 470.2303395851482 938.4461262370965 2 470.2303039431572 MULTI CID FTMS 0 0 0 2573 660079.125 0.4257319434099153 10 -0.0832023620605468 1 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 24.020572477871973 0.5389365498350341 5 HVDAAEK 7 -1 69.334 0.0 0.0 7.3881 0.0 0.0 170.06861289995692 0.0 170.06861289995692 0.0 49.66776068493495 0.0 0.0 0 2.5356668758921828 0.0 0.4247425010840047 0.3054621874040891 HVDAAEK 7.3881 - 202 + 1 3.738 49691.5 1.0 98 2474 2573 SUDHL4_400M_050219_1,2574 SUDHL4_400M_050219_1,2574,RDSFSAEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2575 10.871 218.0 340650.0 25 0 46696.0 + 42940 VVSNNVLS 8 87 416.23223403001 830.4499151268201 2 416.2318908572197 MULTI CID FTMS 0 0 0 2573 314864.5625 0.0389485265557661 50 -0.3565330505371094 2 Unmodified _VVSNNVLS_ REV__ENST00000256951.9_1_12:13368336-13368474:+|nuORF 26.88365393820708 0.4786498634179528 5 VVSE{I|L}{[RE]|[WV]} 7 -1 + 59.543 0.0 0.0 7.1699 7.1699 83.738 0.0 0.0 0.0 15.624241387177946 0.589547871242857 0.589547871242857 0.589547871242857 0 0.805462187404089 2.0 1.066901560044258 0.2614393726401688 VVSE{I|L}{[RE]|[WV]};VVSPASS[KG];VVSE{[NV]|[RG]}[KG];VVSNQSVV;VVSGGQSVV;VVSN[AG]SVV;VVSGG[AG]SVV;[PS]AS[KG]SVV;[VS]VNQSVV;[PS][KS]QSVV 7.1699;7.0989;5.8873;4.8529;3.7376;3.7376;2.6287;2.349;1.5075;0.95986 -;-;-;-;-;-;-;-;-;- 248 + 1 3.738 64109.0 1.0 99 2474 2573 SUDHL4_400M_050219_1,2575 SUDHL4_400M_050219_1,2575,VVSNNVLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2583 10.911 800.0 128300.0 25 0 29642.0 -1 PAFTGLRSCFF 11 62 434.8821114689898 0 434.8819763064384 PEAK CID FTMS 0 0 0 2582 82858.09375 0.5764543822189717 -249 1.5064764022827148 1 Carbamidomethyl (C) _PAFTGLRSC(Carbamidomethyl (C))FF_ ENST00000469802.5_1_20:61464351-61467803:+|nuORF 1.3296431237094175 0.4761840153648598 5 R 1 -1 2.4743 0.0 0.0 0.28513 0.0 0.0 600.579028990911 108.04613672427968 708.6251657151906 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.28513 + + 4 + 1 3.738 84721.2 0.4699999988079071 100 2481 2582 SUDHL4_400M_050219_1,2583 SUDHL4_400M_050219_1,2583,PAFTGLRSCFF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2584 10.925 800.0 151730.0 25 0 33686.0 5999 DRSGHSGY 8 124 439.6927228619796 877.3708927907593 2 439.6927673220634 MULTI CID FTMS 0 0 0 2582 89427.7734375 0.3021644646139281 -27 0.1923608779907226 2 Unmodified _DRSGHSGY_ CON__P20930;ENSG00000143631|ENST00000368799|FLG 5.230669730166228 0.792582437072536 5 QGM 3 7 15.662 0.0 0.0 1.7851 0.0 0.0 543.2397328107437 0.0 543.2397328107437 0.0 0.9112906329627196 0.0 0.0 0 0.0 0.0 0.0 0.0 QGM 1.7851 - 101 1 3.738 99721.8 0.4900000095367431 101 2481 2582 SUDHL4_400M_050219_1,2584 SUDHL4_400M_050219_1,2584,DRSGHSGY False False False False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 2587 10.945 800.0 32347.0 25 0 2278.5 -1 0 59 926.4308237594912 1850.8470945857823 2 926.4295532107352 MULTI CID FTMS 0 0 0 2586 96639.6796875 0.905503325323296 1 -0.0163869857788085 1 5 SN 2 -1 16.964 0.0 0.0 0.91655 0.0 0.0 1303.6100073085424 343.1374910943969 1646.7474984029393 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.75 SN 0.91655 - 239 + 1 3.738 25617.3 0.4399999976158142 102 2483 2586 SUDHL4_400M_050219_1,2587 SUDHL4_400M_050219_1,2587, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2589 10.95 53.0 999760.0 25 0 103660.0 27676 PLIFYVPGRT 10 76 388.2254030990201 1161.6543798972605 3 388.2254821658134 MULTI CID FTMS 0 0 0 2588 920331.125 0.8347133269815155 6 -0.0508594512939453 1 Unmodified _PLIFYVPGRT_ ENSG00000010404|ENST00000340855|IDS 10.823927491677226 0.6659270209832991 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 9 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 26.234 10.974 2.5567 2.2583 2.2583 53.141 0.0 0.0 0.0 0.0 15.437230136198892 0.0 0.0 0 0.5 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 2.2583 - 71 + 1 3.738 53999.9 1.0 103 2484 2588 SUDHL4_400M_050219_1,2589 SUDHL4_400M_050219_1,2589,PLIFYVPGRT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2595 10.982 800.0 110390.0 25 0 15781.0 -1 IRAPTTMK 8 110 467.2630597903548 932.5115666475097 2 467.2629272341728 MULTI CID FTMS 0 0 0 2594 82786.8515625 0.2528469364020836 -23 0.1758604049682617 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 22.736283301280096 0.5659792798204337 5 T{M(Oxidation (M))|F}K 3 -1 36.198 0.0 0.0 3.8818 0.0 0.0 538.3228203196727 0.0 538.3228203196727 0.0 16.175908674695165 0.0 0.0 0 1.274227503252014 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.8818 + + 230 1 3.738 72371.2 0.4300000071525574 104 2489 2594 SUDHL4_400M_050219_1,2595 SUDHL4_400M_050219_1,2595,IRAPTTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2596 10.996 800.0 249090.0 25 0 13306.0 + 31789 RSRDPGMVR 9 226 358.5258233971624 1072.5556407916872 3 358.5258972048759 MULTI CID FTMS 0 0 0 2594 92548.5 0.5383600475689967 -11 0.0831212997436523 2 Unmodified _RSRDPGMVR_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-2|MCM7 24.881564428377168 0.2146028316269493 5 [VG][HK]HR 6 8 31.4 0.0 0.0 2.9276 0.0 0.0 0.0 355.1453951471313 355.1453951471313 8.768827543763749 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.4247425010840047 [VG][HK]HR 2.9276 - 235 + 1 3.738 161273.2 0.8500000238418579 105 2489 2594 SUDHL4_400M_050219_1,2596 SUDHL4_400M_050219_1,2596,RSRDPGMVR False True RSRDPGMVR 10.995819 358.525897204876 659543.1875 2594.0 nc|ENSG00000166508|P33993-2|MCM7;;ENSG00000166508|ENST00000303887|MCM7 6.492848873138428 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2598 11.001 8.6 3976300.0 25 0 260940.0 + 28193 PQDESISFQQR 11 62 445.550904815088 1333.630885045464 3 445.5511962771416 MULTI CID FTMS 0 0 0 2597 4571392.5 0.4149756491664435 10 -0.0680141448974609 1 Unmodified _PQDESISFQQR_ REV__ENSG00000169184|ENST00000302326|MN1 8.155526934196011 0.8366696279279818 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ + + 47.868 10.177 1.9487 3.5893 3.5893 55.245 0.0 0.0 0.0 0.0 36.18562527100117 0.0 0.0 0 0.5 0.0 0.0 0.7742275032520141 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 3.5893 - 156 + 1 3.738 31961.6 1.0 106 2490 2597 SUDHL4_400M_050219_1,2598 SUDHL4_400M_050219_1,2598,PQDESISFQQR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2600 11.006 79.0 797190.0 25 0 185600.0 + -1 GVVYNSSRCHR 11 43 667.8228152982242 1333.6310776632483 2 667.8231078982353 MULTI CID FTMS 0 0 0 2599 752298.5 0.3890940440705612 11 -0.0766181945800781 1 Carbamidomethyl (C) _GVVYNSSRC(Carbamidomethyl (C))HR_ REV__ENST00000450453.6_2_1:163291794-163292711:+|nuORF 4.897010918128616 0.8520435188433833 5 R 1 -1 13.979 0.0 0.0 1.0482 0.0 0.0 1159.5195797157858 0.0 1159.5195797157858 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.0482 + + 3 + 1 3.738 50397.0 1.0 107 2491 2599 SUDHL4_400M_050219_1,2600 SUDHL4_400M_050219_1,2600,GVVYNSSRCHR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2606 11.039 800.0 70555.0 25 0 9547.5 -1 VRLKEDMKK 9 66 581.8344792529931 1161.654405572786 2 581.8348266482353 MULTI CID FTMS 0 0 0 2605 55211.1640625 0.326434870990623 18 -0.1382570266723632 1 Oxidation (M) _VRLKEDM(Oxidation (M))KK_ ENSG00000138640|ENST00000264344|FAM13A 13.90604991867851 0.4602628045680013 5 {M(Oxidation (M))|F}T{M(Oxidation (M))|F}KK 5 -1 31.823 0.0 0.0 2.7394 0.0 0.0 492.3453541486344 0.0 492.3453541486344 0.0 10.078474942632596 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}T{M(Oxidation (M))|F}KK 2.7394 - 63 1 3.738 49134.8 0.4099999964237213 108 2496 2605 SUDHL4_400M_050219_1,2606 SUDHL4_400M_050219_1,2606,VRLKEDMKK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2609 11.059 800.0 17557.0 25 0 5639.0 -1 0 27 587.9853648777228 0 587.9848510622978 PEAK CID FTMS 0 0 0 2608 40559.02734375 0.565743756289153 1 -0.0163831710815429 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.738 23087.4 0.3600000143051147 109 2498 2608 SUDHL4_400M_050219_1,2609 SUDHL4_400M_050219_1,2609, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2611 11.064 74.0 804270.0 25 0 136150.0 + 36063 SVQHVDAAEK 10 79 361.8525023106173 1082.5356775320515 3 361.8524047732353 MULTI CID FTMS 0 0 0 2610 709669.8125 0.6986426121701592 7 -0.0386018753051757 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 5 HVDAAEK 7 3 37.005 0.0 0.0 3.4183 0.0 0.0 314.1597097977228 0.0 314.1597097977228 0.0 7.946537861557992 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3054621874040891 + HVDAAEK 3.4183 + + 334 + 1 3.738 56175.6 1.0 110 2499 2610 SUDHL4_400M_050219_1,2611 SUDHL4_400M_050219_1,2611,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2614 11.077 378.0 196840.0 25 0 16799.0 + 39644 VDWELHVEK 9 108 385.5320431797285 1153.5743001393855 3 385.5314514040947 MULTI CID FTMS 0 0 0 2613 96017.8515625 0.425505716877762 -11 0.0720758438110351 1 Unmodified _VDWELHVEK_ REV__ENSG00000075420|ENST00000415807|FNDC3B 11.640296217721598 0.521594087909532 5 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T]GK 11 -1 + 34.93 0.0 0.0 3.028 3.028 72.518 0.0 0.0 0.0 16.177602610593993 7.402824333309763 7.402824333309763 0.2680249241196719 0 0.1677353201839438 2.0 0.34733495922753 0.25 [VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T]GK;[VS]AQ{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}YGK;{[SA]|[TG]}VQ{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T]GK;{[SA]|[TG]}VQ{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}YGK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}YGK;{[VA]|[{I|L}G]}SQ{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T]GK;{[VA]|[{I|L}G]}SQ{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}YGK 3.028;3.0047;1.6063;1.583;1.2972;1.274;0.62643;0.60319 -;-;-;-;-;-;-;- 299 1 3.738 65258.9 1.0 111 2501 2613 SUDHL4_400M_050219_1,2614 SUDHL4_400M_050219_1,2614,VDWELHVEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2617 11.086 24.0 2547800.0 25 0 592150.0 6006 DRWGSGGQ 8 56 431.6954154451785 861.3762779571571 2 431.6954528689384 MULTI CID FTMS 0 0 0 2616 2498022.75 0.9148872369631588 -10 0.0709371566772461 1 Unmodified _DRWGSGGQ_ ENST00000577783.2_1_17:77079170-77080166:+|nuORF 4.3292370932331545 0.7980541185046766 5 DD 2 7 25.217 0.0 0.0 2.9275 0.0 0.0 0.0 628.2995081138321 628.2995081138321 8.622731327798547 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DD 2.9275 - 7 + 1 3.738 55716.0 1.0 112 2503 2616 SUDHL4_400M_050219_1,2617 SUDHL4_400M_050219_1,2617,DRWGSGGQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2619 11.094 191.0 236220.0 25 0 23024.0 + 36062 SVQHVDAAEK 10 72 542.2752307243197 1082.5359085154394 2 542.2754394412041 MULTI CID FTMS 0 0 0 2618 274254.8125 0.529991650483162 14 -0.1083717346191406 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 44.94466952835103 0.1098215951422272 5 [VS]AGHVDAAEK 11 2 [VS]AG + + 58.269 32.747 10.424 5.3826 5.3826 60.472 0.0 0.0 0.0 0.0 25.52124182077982 0.0 0.0 0 1.6549471895720984 0.0 0.5 0.3054621874040891 [VS]AGHVDAAEK 5.3826 - 263 + 1 3.738 39749.3 1.0 113 2504 2618 SUDHL4_400M_050219_1,2619 SUDHL4_400M_050219_1,2619,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2622 11.112 679.0 73675.0 25 0 7592.3 + 19205 LEGEESRMSGE 11 68 620.2617392239592 1238.5089255147184 2 620.2620117068291 MULTI CID FTMS 0 0 0 2621 101010.5546875 0.4276557098839139 -18 0.1360349655151367 1 Oxidation (M) _LEGEESRM(Oxidation (M))SGE_ ENSG00000167768|ENST00000252244|KRT1;P04264;ENSG00000189182|ENST00000341809|KRT77;Q7Z794;ENSEMBL:ENSBTAP00000038253 44.391923383255 0.1486875248750151 5 {I|L}EGEES 6 5 70.394 0.0 0.0 5.6838 0.0 0.0 0.0 591.2207125299436 591.2207125299436 52.346368802282015 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3494850021680094 0.0 + {I|L}EGEES 5.6838 + + 245 + 1 3.738 43317.5 1.0 114 2506 2621 SUDHL4_400M_050219_1,2622 SUDHL4_400M_050219_1,2622,LEGEESRMSGE False False LEGEESRMSGE 11.11201 620.262011706829 1075782.375 2621.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253 8.191323280334473 2.0 True 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2625 11.122 176.0 370950.0 25 0 31964.0 + 30448 RDSFSAEK 8 81 470.23032847291984 938.4461040126396 2 470.2301208376884 MULTI CID FTMS 0 0 0 2624 447657.65625 1.0 0 0.0 1 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 24.020572477871973 0.5389365498350341 5 HVDAAEK 7 -1 72.229 0.0 0.0 7.6967 0.0 0.0 170.07021503040943 0.0 170.07021503040943 0.0 44.88515397773476 0.0 0.0 0 2.504432191740108 0.0 0.4247425010840047 0.3252574989159953 HVDAAEK 7.6967 - 293 + 1 3.738 54731.0 1.0 115 2508 2624 SUDHL4_400M_050219_1,2625 SUDHL4_400M_050219_1,2625,RDSFSAEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2626 11.128 342.0 171300.0 25 0 18564.0 42964 VVSQTAVQ 8 104 416.2321367793761 830.4497206255522 2 416.2321044802666 MULTI CID FTMS 0 0 0 2624 109057.7421875 0.2233512280245443 13 -0.0902099609375 2 Unmodified _VVSQTAVQ_ ENSG00000198793|ENST00000361445|MTOR 15.847184025352805 0.6768015514314958 5 VVSE{I|L}{[RE]|[WV]} 7 4 + 53.02 0.0 0.0 6.3845 6.3845 93.497 0.0 0.0 0.0 43.41592278318394 8.014932106861039 8.014932106861039 18.748290507521723 0 0.7302046884880937 2.0 0.0 0.2742275032520141 VVSE{I|L}{[RE]|[WV]};VVSPYV[PA];VVSPAS[SG]K 6.3845;4.1269;3.6608 -;-;- 107 + 1 3.738 50810.2 1.0 116 2508 2624 SUDHL4_400M_050219_1,2626 SUDHL4_400M_050219_1,2626,VVSQTAVQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2629 11.149 800.0 80906.0 25 0 3517.2 + 42275 VSQHTPEPIF 10 97 577.7940554874427 1153.5735580416854 2 577.7938110232353 MULTI CID FTMS 0 0 0 2628 95365.8046875 1.0 0 0.0 1 Unmodified _VSQHTPEPIF_ REV__ENSG00000221843|ENST00000447166|C2orf16 24.99096001346401 0.4071966087057876 5 [VS]QHVDAAAEK 11 -1 + 91.78 0.0 0.0 7.9562 7.9562 88.842 0.0 0.0 0.0 61.0802301801089 15.968178070062194 15.968178070062194 3.565473235138114 0 1.9436726795685344 2.0 0.8494850021680094 0.7887254899964358 [VS]QHVDAAAEK;[VS]QHVD{[NV]|[RG]}EK;[VS][AG]HVDAAAEK;[VS][AG]HVD{[NV]|[RG]}EK;[VS]QHVAA{[DA]|[EG]}EK;[VS]AGHVD{[NV]|[RG]}A[VS];[VS]QH[Q{I|L}]{[DA]|[EG]}EK;[VS]Q{M(Oxidation (M))|F}K{M(Oxidation (M))|F}AAEK;[VS]QHVD{[NV]|[RG]}A[VS];[VS]A[RH]D{[NV]|[RG]}AW 7.9562;7.6471;7.1648;6.8526;5.7016;5.5147;5.0243;4.8397;4.6767;4.6508 -;-;-;-;-;-;-;-;-;- 862 + 1 3.738 54342.2 0.4000000059604645 117 2510 2628 SUDHL4_400M_050219_1,2629 SUDHL4_400M_050219_1,2629,VSQHTPEPIF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2634 11.168 277.0 266180.0 25 0 68133.0 + -1 DAAGMPLGM 9 76 439.6927228619796 877.3708927907593 2 439.6926452517509 MULTI CID FTMS 0 0 0 2633 238572.359375 0.8061040376076235 6 -0.0415935516357421 1 Oxidation (M) _DAAGM(Oxidation (M))PLGM_ REV__chr19:54667449-54667635|30|13.73|0.58|4.57|+|0|TE_info:L2a,L2a_dup159786,L2,LINE,donor,-,54667055,54667449|None,LILRB4|3;REV__chr19:54667449-54667638|38|37.61|0.94|5.32|+|0|TE_info:L2a,L2a_dup159786,L2,LINE,donor,-,54667055,54667449|None,LILRB4|3 4.3292370932331545 0.7635526921153418 5 QGM 3 -1 16.911 0.0 0.0 1.9275 0.0 0.0 543.24125868965 0.0 543.24125868965 0.0 9.921525057367408 0.0 0.0 0 0.0 0.0 0.0 0.0 QGM 1.9275 - 24 1 3.738 61605.2 1.0 118 2514 2633 SUDHL4_400M_050219_1,2634 SUDHL4_400M_050219_1,2634,DAAGMPLGM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2635 11.182 800.0 116950.0 25 0 9895.1 + 39985 VGAVKANK 8 115 393.74511054726736 785.4756681613347 2 393.7450744509697 MULTI CID FTMS 0 0 0 2633 86241.2265625 0.7548101821670808 -9 0.0670490264892578 2 Unmodified _VGAVKANK_ REV__ENSG00000184058|ENST00000649276|TBX1;REV__nc|ENSG00000184058|O43435-2|TBX1;REV__nc|ENSG00000184058|O43435-3|TBX1;REV__nc|ENSG00000184058|O43435|TBX1 9.347437153973935 0.7675937258251505 5 P{I|L}K 3 -1 31.783 0.0 0.0 4.0464 0.0 0.0 429.2339211904347 0.0 429.2339211904347 0.0 10.10090614668492 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 P{I|L}K 4.0464 - 51 + 1 3.738 77283.4 0.4000000059604645 119 2514 2633 SUDHL4_400M_050219_1,2635 SUDHL4_400M_050219_1,2635,VGAVKANK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2646 11.228 400.0 215710.0 25 0 37795.0 -1 IRAPTTMK 8 86 467.2630597903548 932.5115666475097 2 467.2628661990166 MULTI CID FTMS 0 0 0 2645 248745.0625 0.7597151698755884 12 -0.0742807388305664 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 22.736283301280096 0.5659792798204337 5 AT{M(Oxidation (M))|F}K 4 -1 42.467 0.0 0.0 4.5541 0.0 0.0 467.2926502912125 0.0 467.2926502912125 0.0 23.04235956215812 0.0 0.0 0 1.2302046884880935 0.0 0.4247425010840047 0.0 AT{M(Oxidation (M))|F}K 4.5541 - 153 1 3.738 73260.1 1.0 120 2524 2645 SUDHL4_400M_050219_1,2646 SUDHL4_400M_050219_1,2646,IRAPTTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2649 11.248 800.0 34619.0 25 0 3320.2 -1 0 30 921.6263128122332 3682.4761453825326 4 921.8764526247978 MULTI CID FTMS 0 0 0 2648 14655.7685546875 0.2248562104574637 1 -0.0163841247558593 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.738 30249.0 0.3199999928474426 121 2526 2648 SUDHL4_400M_050219_1,2649 SUDHL4_400M_050219_1,2649, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2652 11.264 460.0 179480.0 25 0 49386.0 + 717 AEPHTSGL 8 101 406.20059162982426 810.3866303264485 2 406.1999694705009 MULTI CID FTMS 0 0 0 2651 97128.2578125 0.5669126458501672 -17 0.1038541793823242 1 Unmodified _AEPHTSGL_ REV__ENSG00000198589|ENST00000651943|LRBA;REV__nc|ENSG00000198589|P50851-2|LRBA;REV__nc|ENSG00000198589|P50851|LRBA 9.347437153973935 0.7675937258251505 5 VDAAEK 6 -1 35.344 0.0 0.0 4.3614 0.0 0.0 179.07109185164228 0.0 179.07109185164228 0.0 28.605472764671024 0.0 0.0 0 2.031718309096375 0.0 0.5 0.2614393726401688 VDAAEK 4.3614 - 102 + 1 3.738 69124.6 1.0 122 2528 2651 SUDHL4_400M_050219_1,2652 SUDHL4_400M_050219_1,2652,AEPHTSGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2665 11.325 800.0 92698.0 25 0 9988.5 + 8179 EPRPPFAP 8 88 455.741014694212 909.467476455224 2 455.7407409548759 MULTI CID FTMS 0 0 0 2664 55923.0625 0.3121773897482913 -27 0.1518840789794922 1 Unmodified _EPRPPFAP_ REV__ENST00000391702.3_1_19:58281028-58281229:+|nuORF 13.50788311687929 0.7113601687236069 5 [VS]K{[NV]|[RG]}AE 7 -1 26.471 0.0 0.0 2.9106 0.0 0.0 0.0 179.0462587945922 179.0462587945922 5.5014445271442725 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 [VS]K{[NV]|[RG]}AE 2.9106 - 106 + 1 3.738 62426.4 0.4600000083446502 123 2540 2664 SUDHL4_400M_050219_1,2665 SUDHL4_400M_050219_1,2665,EPRPPFAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2666 11.339 800.0 48720.0 25 0 5420.2 -1 LSCPWNLSQG 10 78 581.2731435918083 1160.5317342504163 2 581.2729369997978 MULTI CID FTMS 0 0 0 2664 86087.765625 0.8538496067950697 -4 0.016061782836914 2 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 23.78978130925829 0.4341852049148378 5 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[YR]EQSAN 9 -1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[YR]EQ + + 35.688 7.8926 0.90677 3.0751 3.0751 54.285 0.0 0.0 0.0 0.0 8.452205667976571 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3252574989159953 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[YR]EQSAN 3.0751 - 97 + 1 3.738 35111.6 0.3899999856948852 124 2540 2664 SUDHL4_400M_050219_1,2666 SUDHL4_400M_050219_1,2666,LSCPWNLSQG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2668 11.344 63.0 911130.0 25 0 211110.0 6007 DRWGSGGQ 8 63 431.6954154451785 861.3762779571571 2 431.6954528689384 MULTI CID FTMS 0 0 0 2667 919177.125 0.3366436195070641 28 -0.1664934158325195 1 Unmodified _DRWGSGGQ_ ENST00000577783.2_1_17:77079170-77080166:+|nuORF 4.3292370932331545 0.7980541185046766 5 DD 2 7 25.217 0.0 0.0 2.9275 0.0 0.0 0.0 628.2974477509892 628.2974477509892 16.264100213633768 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DD 2.9275 - 9 + 1 3.738 49648.9 1.0 125 2541 2667 SUDHL4_400M_050219_1,2668 SUDHL4_400M_050219_1,2668,DRWGSGGQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2672 11.369 800.0 95256.0 25 0 6567.7 + 36064 SVQHVDAAEK 10 90 542.2752436801536 1082.5359344271071 2 542.2758666872978 MULTI CID FTMS 0 0 0 2671 78846.9609375 0.1669505802735575 -31 0.1954364776611328 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 78.11562728322046 0.0186121335515026 5 [VS]QHVDAAEK 10 0 + 97.29 0.0 0.0 8.9873 8.9873 85.322 0.0 0.0 0.0 0.1090060725012733 0.1090060725012733 0.1090060725012733 0.1090060725012733 0 3.234636880228201 2.0 0.8807196863200843 0.805462187404089 + + [VS]QHVDAAEK;[VS]AGHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]QHVDAAA[VS];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]QHVD[DV]GK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{M(Oxidation (M))|F}EK 8.9873;8.9772;8.1407;7.6196;7.3759;7.1345;6.963;6.8941;6.7201;6.1228 +;-;-;-;-;-;-;-;-;- + 1380 + 1 3.738 62641.5 0.4199999868869781 126 2544 2671 SUDHL4_400M_050219_1,2672 SUDHL4_400M_050219_1,2672,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2673 11.382 800.0 106090.0 25 0 17456.0 + 5257 DKLFQFKA 8 97 498.7774233817052 995.5402938302104 2 498.7775451540947 MULTI CID FTMS 0 0 0 2671 88902.546875 0.3738612035362829 -13 0.0797328948974609 2 Unmodified _DKLFQFKA_ REV__ENST00000333775.9_1_17:7761025-7761136:-|nuORF 30.22481116460888 0.4082965392918993 5 [EP]{I|L}ASAA{I|L}K 9 -1 53.069 0.0 0.0 5.3307 0.0 0.0 0.0 112.00489670484504 112.00489670484504 20.564338470346897 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.2614393726401688 0.4247425010840047 [EP]{I|L}ASAA{I|L}K 5.3307 - 219 1 3.738 68469.7 0.4099999964237213 127 2544 2671 SUDHL4_400M_050219_1,2673 SUDHL4_400M_050219_1,2673,DKLFQFKA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2675 11.389 202.0 298650.0 25 0 42379.0 + 42956 VVSPKSQS 8 72 416.232107662834 830.449662392468 2 416.2319824099541 MULTI CID FTMS 0 0 0 2674 301997.28125 0.6153944759315487 -20 0.1544351577758789 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 20.453626601364224 0.6087503291685402 5 VVSE{I|L} 5 5 51.58 0.0 0.0 6.2111 0.0 0.0 0.0 300.13105188541255 300.13105188541255 37.39323643525985 0.0 0.0 0.0 0 0.75 2.0 0.4247425010840047 0.0 VVSE{I|L} 6.2111 - 113 + 1 3.738 53958.3 1.0 128 2545 2674 SUDHL4_400M_050219_1,2675 SUDHL4_400M_050219_1,2675,VVSPKSQS False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2676 11.403 800.0 102710.0 25 0 5557.4 + 27180 PGEDKHEK 8 106 470.23032847291984 938.4461040126396 2 470.2303954958916 MULTI CID FTMS 0 0 0 2674 84727.5234375 0.1892685677427191 37 -0.1941919326782226 2 Unmodified _PGEDKHEK_ REV__ENSG00000122592|ENST00000242159|HOXA7 21.74664581756881 0.5868176546531598 5 HVDAAEK 7 -1 66.692 0.0 0.0 7.1067 0.0 0.0 170.07017164146265 0.0 170.07017164146265 0.0 47.30667903510216 0.0 0.0 0 2.447621246364342 0.0 0.4247425010840047 0.3054621874040891 HVDAAEK 7.1067 - 339 + 1 3.738 67998.3 0.4399999976158142 129 2545 2674 SUDHL4_400M_050219_1,2676 SUDHL4_400M_050219_1,2676,PGEDKHEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2677 11.406 176.0 487640.0 25 0 66469.0 + 36066 SVQHVDAAEK 10 98 361.8525281842932 1082.5357551530797 3 361.8523742556572 MULTI CID FTMS 0 0 0 2674 372068.53125 0.3346600997971384 -27 0.1881284713745117 3 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 5 HVDAAEK 7 3 32.783 0.0 0.0 3.0284 0.0 0.0 314.15619079936715 0.0 314.15619079936715 0.0 3.0291926585482543 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3494850021680094 + HVDAAEK 3.0284 + + 511 + 1 3.738 78666.9 1.0 130 2545 2674 SUDHL4_400M_050219_1,2677 SUDHL4_400M_050219_1,2677,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2681 11.424 392.0 291030.0 25 0 72187.0 27677 PLIFYVPGRT 10 108 388.22545051402767 1161.654522142283 3 388.2263366580009 MULTI CID FTMS 0 0 0 2680 118152.671875 0.2670536318698643 -31 0.2239437103271484 1 Unmodified _PLIFYVPGRT_ ENSG00000010404|ENST00000340855|IDS 10.823927491677226 0.6659270209832991 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 9 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 24.429 8.086 1.8838 2.1029 2.1029 53.001 0.0 0.0 0.0 0.0 14.824810114261304 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.1803115997617927 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 2.1029 - 74 + 1 3.738 97375.5 1.0 131 2548 2680 SUDHL4_400M_050219_1,2681 SUDHL4_400M_050219_1,2681,PLIFYVPGRT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2702 11.505 41.0 1128400.0 25 0 151890.0 + 12189 GQRKPATSY 9 74 504.2671769773768 1006.5198010215536 2 504.2671691775322 MULTI CID FTMS 0 0 0 2701 1421283.25 0.535371905262578 -16 0.0643463134765625 1 Unmodified _GQRKPATSY_ ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28 45.69961567697781 0.0497987121815769 5 {[QG]|[NA]}RKPATSY 9 0 + 63.925 0.0 0.0 6.3511 6.3511 94.227 0.0 0.0 0.0 6.637342758552691 56.47730666700717 6.637342758552691 31.01342204748164 0 1.305462187404089 0.0 0.8807196863200843 0.25 + + {[QG]|[NA]}RKPATSY;{[QG]|[NA]}RK[Q{I|L}]DY;{[QG]|[NA]}R[{I|L}V]{[QG]|[NA]}SY;[PA]{[NV]|[RG]}[KG]ATSY;[PA]{[NV]|[RG]}[KQ]TSY;[PA]T[RK]{[QG]|[NA]}SY 6.3511;3.2698;2.7222;2.389;2.3382;2.2551 +;-;-;-;-;- + 102 1 3.738 41819.0 1.0 132 2568 2701 SUDHL4_400M_050219_1,2702 SUDHL4_400M_050219_1,2702,GQRKPATSY True True GQRKPATSY 11.505311 504.267169177532 12912182.0 2701.0 ENSG00000108107|ENST00000344063|RPL28;;nc|ENSG00000108107|P46779-2|RPL28;;nc|ENSG00000108107|P46779-3|RPL28 7.525533517201741 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2704 11.517 541.0 183700.0 25 0 44982.0 + 38074 TPHEATVG 8 106 406.20059162982426 810.3866303264485 2 406.1996642947197 MULTI CID FTMS 0 0 0 2703 103649.34375 0.6049745463300569 24 -0.2043437957763672 1 Unmodified _TPHEATVG_ REV__ENST00000602009.5_1_19:16512885-16513104:-|nuORF 12.531546534597751 0.7257836412119636 5 VDAAEK 6 -1 49.583 0.0 0.0 6.1184 0.0 0.0 179.06865044539228 0.0 179.06865044539228 0.0 42.09162735865733 0.0 0.0 0 2.1307196863200843 0.0 0.3807196863200844 0.2742275032520141 VDAAEK 6.1184 - 106 + 1 3.738 82814.0 1.0 133 2569 2703 SUDHL4_400M_050219_1,2704 SUDHL4_400M_050219_1,2704,TPHEATVG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2714 11.556 228.0 414920.0 25 0 28150.0 38565 TSVRHGGI 8 114 413.7302722313798 825.4459915295596 2 413.7301208376884 MULTI CID FTMS 0 0 0 2713 279418.5625 0.9056001319093658 -3 0.0120162963867187 1 Unmodified _TSVRHGGI_ ENSG00000163629|ENST00000411767|PTPN13;ENST00000511105.1_1_4:87684292-87687745:+|nuORF;nc|ENSG00000163629|Q12923-2|PTPN13;nc|ENSG00000163629|Q12923-3|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13 23.1484247019978 0.5573009939494978 5 ES 2 7 26.498 0.0 0.0 3.2101 0.0 0.0 0.0 606.3492799068395 606.3492799068395 -0.1925334368823072 0.0 -0.1925334368823072 0.0 0 0.0 0.8538719643217619 0.0 0.0 ES 3.2101 - 221 + 1 3.738 76290.8 1.0 134 2578 2713 SUDHL4_400M_050219_1,2714 SUDHL4_400M_050219_1,2714,TSVRHGGI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2717 11.573 556.0 133390.0 25 0 15305.0 + 11990 GPEGQRVPA 9 88 455.741014694212 909.467476455224 2 455.7404052615166 MULTI CID FTMS 0 0 0 2716 142292.28125 0.7943133111130087 13 -0.149235725402832 1 Unmodified _GPEGQRVPA_ REV__ENST00000595973.2_1_19:18493140-18496906:+|nuORF 11.640296217721598 0.521594087909532 5 PEA{[NV]|[RG]}KAP 8 -1 39.167 0.0 0.0 4.3066 0.0 0.0 85.01737821871968 0.0 85.01737821871968 0.0 18.197756518413684 0.0 0.0 0 1.3494850021680094 0.0 0.3807196863200844 0.3807196863200844 PEA{[NV]|[RG]}KAP 4.3066 - 135 + 1 3.738 63343.8 1.0 135 2580 2716 SUDHL4_400M_050219_1,2717 SUDHL4_400M_050219_1,2717,GPEGQRVPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2720 11.593 800.0 61617.0 25 0 3202.6 -1 0 67 660.6195277973713 1978.8367539923136 3 660.9536010622978 MULTI CID FTMS 0 0 0 2719 49306.39453125 0.3841275833983262 -1 0.0038890838623046 1 5 [PS]{[HG]|PP}[C(Carbamidomethyl (C))N]GQSAPST[RD]Q[SG]H 19 -1 [PS]{[HG]|PP}[C(Carbamidomethyl (C))N]GQSA + + 43.667 42.382 4.2578 2.2067 2.2067 53.08 0.0 0.0 0.0 0.0 1.2850579532103126 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 1.7051120522087029 [PS]{[HG]|PP}[C(Carbamidomethyl (C))N]GQSAPST[RD]Q[SG]H 2.2067 - 394 + 1 3.738 45520.9 0.3899999856948852 136 2582 2719 SUDHL4_400M_050219_1,2720 SUDHL4_400M_050219_1,2720, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2723 11.613 800.0 66533.0 25 0 4231.0 + 17411 KMQEHSDQV 9 87 551.2533145375988 1100.4920761419976 2 551.2534667849541 MULTI CID FTMS 0 0 0 2722 77330.96875 0.7149023859730014 -4 0.0366115570068359 1 Unmodified _KMQEHSDQV_ ENSG00000166508|ENST00000303887|MCM7;ENST00000463722.5_1_7:99695745-99696843:-|nuORF;nc|ENSG00000166508|P33993-2|MCM7;nc|ENSG00000166508|P33993-3|MCM7 22.65808497894818 0.2428932432760099 5 {NN|[MP]|[D{I|L}]|[EV]}[RD][PG]SDQV 10 5 + 38.403 0.0 0.0 3.4896 3.4896 78.709 0.0 0.0 0.0 1.974987195809419 24.90803747765064 1.974987195809419 4.771212547196626 0 0.75 0.0 0.0 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}[RD][PG]SDQV;{NN|[MP]|[D{I|L}]|[EV]}[RD][PS]GDQV;[AG]G[WQ][PG]SDQV;[AG]G[WQ][PS]GDQV;{[QG]|[NA]}[WQ][PG]SDQV;[AG]G{[QG]|[NA]}[WP]SDQV;{[QG]|[NA]}[WQ][PS]GDQV;{[QG]|[NA]}{[QG]|[NA]}[WP]SDQV;{NN|[MP]|[D{I|L}]|[EV]}[RD][PG]SA[RD];{NN|[MP]|[D{I|L}]|[EV]}[RD][PS]GA[RD] 3.4896;3.0561;2.9389;2.5054;2.4685;2.3038;2.035;1.8334;1.1043;0.67071 -;-;-;-;-;-;-;-;-;- 181 1 3.738 46328.8 0.4000000059604645 137 2584 2722 SUDHL4_400M_050219_1,2723 SUDHL4_400M_050219_1,2723,KMQEHSDQV False True KMQEHSDQV 11.613415 551.253466784954 575083.75 2722.0 nc|ENSG00000166508|P33993-3|MCM7;;nc|ENSG00000166508|P33993-2|MCM7;;ENSG00000166508|ENST00000303887|MCM7;;ENST00000463722.5_1_7:99695745-99696843:-|nuORF 6.706441720326741 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2724 11.627 800.0 68176.0 25 0 8112.0 -1 0 53 990.4263597155256 1978.8381664978508 2 990.928759753704 MULTI CID FTMS 0 0 0 2722 94337.6015625 0.9754438857832308 1 -0.0440750122070312 2 5 QGSH 4 -1 31.414 0.0 0.0 1.5875 0.0 0.0 1551.6569969195289 0.0 1551.6569969195289 0.0 9.501962355242952 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 QGSH 1.5875 - 36 + 1 3.738 43546.7 0.3700000047683716 138 2584 2722 SUDHL4_400M_050219_1,2724 SUDHL4_400M_050219_1,2724, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2725 11.641 800.0 80038.0 25 0 6864.0 9272 FHSHEFHSH 9 81 582.7496450752761 1163.4847372173522 2 582.7494384646416 MULTI CID FTMS 0 0 0 2722 86448.71875 1.0 0 0.0 3 Unmodified _FHSHEFHSH_ ENSG00000118785|ENST00000395080|SPP1;ENST00000509659.5_1_4:88898870-88904045:+|nuORF;nc|ENSG00000118785|P10451-3|SPP1;nc|ENSG00000118785|P10451-4|SPP1;nc|ENSG00000118785|P10451-5|SPP1 11.640296217721598 0.521594087909532 5 H{M(Oxidation (M))|F}SQE 5 7 49.993 0.0 0.0 4.2968 0.0 0.0 0.0 532.2155911619736 532.2155911619736 29.50827206916173 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.9247425010840048 0.0 H{M(Oxidation (M))|F}SQE 4.2968 - 64 + 1 3.738 55043.7 0.4000000059604645 139 2584 2722 SUDHL4_400M_050219_1,2725 SUDHL4_400M_050219_1,2725,FHSHEFHSH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2727 11.646 113.0 410070.0 25 0 59548.0 42841 VVLDNSGK 8 70 416.232107662834 830.449662392468 2 416.2321044802666 MULTI CID FTMS 0 0 0 2726 441072.78125 0.8987953531949698 20 -0.116922378540039 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 16.942295170755138 0.6606234159769251 5 VVSE{I|L}{[RE]|[WV]} 7 6 + 48.517 0.0 0.0 5.8422 5.8422 81.758 0.0 0.0 0.0 14.960310232820149 1.6576843174766154 1.6576843174766154 1.6576843174766154 0 0.7302046884880937 2.0 0.0 0.0 VVSE{I|L}{[RE]|[WV]};VVSPASS[KG];VVSE{[NV]|[RG]}[KG] 5.8422;5.6426;4.2667 -;-;- 99 + 1 3.738 40505.8 1.0 140 2585 2726 SUDHL4_400M_050219_1,2727 SUDHL4_400M_050219_1,2727,VVLDNSGK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2728 11.651 277.0 213090.0 25 0 17485.0 + 36065 SVQHVDAAEK 10 73 542.2752436801536 1082.5359344271071 2 542.2753173708916 MULTI CID FTMS 0 0 0 2726 216786.546875 0.4590239035968808 10 -0.0766716003417968 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 5 [VS]AGHVDAAEK 11 2 + 105.76 0.0 0.0 9.7696 9.7696 92.705 0.0 0.0 0.0 6.624931358622007 6.624931358622007 6.624931358622007 6.624931358622007 0 3.110924374808178 2.0 0.5501648626366046 0.0 [VS]AGHVDAAEK;[VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVD[DV]GK;[VS]QHVADAEK;[VS]QH[TP]SAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]QHVD[DV]GK;[VS][AG]HVADAEK;[VS][AG]H[TP]SAEK 9.7696;9.1576;8.3111;8.1277;7.9311;7.5203;7.3631;7.2536;7.0845;6.6737 -;+;-;-;-;-;-;-;-;- + 909 1 3.738 51590.8 1.0 141 2585 2726 SUDHL4_400M_050219_1,2728 SUDHL4_400M_050219_1,2728,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2729 11.655 214.0 318960.0 25 0 41742.0 + 34865 SQGFSHSQM 9 99 512.7112693500856 1023.4079857669713 2 512.7112914919853 MULTI CID FTMS 0 0 0 2726 320703.625 0.0550720397503326 -29 0.1891183853149414 3 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 114.20165948288296 0.0037743244297685 5 {[QS]|[NT]}G[MN]SWQS 9 5 + 77.681 0.0 0.0 7.5904 7.5904 85.586 0.0 0.0 0.0 17.361469123803317 47.67224732093953 17.361469123803317 1.4213423929607387 0 0.8494850021680094 1.0457574905606752 0.9291746928241126 1.23239816956497 {[QS]|[NT]}G[MN]SWQS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}QS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QT{[CA]|SS}S;{[QS]|[NT]}G[MN]SW[AG]S;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}QS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}[AG]S;{[QS]|[NT]}G{[CT]|[{M(Oxidation (M))|F}G]}QWQS;{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}QS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QT{[CA]|SS}S 7.5904;7.4516;7.1509;6.6907;6.5518;6.5518;6.3901;6.1786;5.9239;5.8727 -;-;-;-;-;-;-;-;-;- 1292 1 3.738 55990.2 1.0 142 2585 2726 SUDHL4_400M_050219_1,2729 SUDHL4_400M_050219_1,2729,SQGFSHSQM True False SQGFSHSQM 11.65521 512.711291491985 84208668.0 2726.0 ENSG00000181143|ENST00000397910|MUC16 9.874350547790527 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2730 11.669 800.0 167120.0 25 0 8873.7 + 36139 SVTYWGADKK 10 110 577.7939051432916 1153.573257353383 2 577.7937499880791 MULTI CID FTMS 0 0 0 2726 123588.125 0.3838893478621923 -10 0.1035890579223632 4 Unmodified _SVTYWGADKK_ REV__ENSG00000120729|ENST00000239926|MYOT;REV__nc|ENSG00000120729|Q9UBF9-2|MYOT;REV__nc|ENSG00000120729|Q9UBF9|MYOT 34.40172386719151 0.2166836008404837 5 [VS]QHVDAAAEK 11 -1 + 124.0 0.0 0.0 10.749 10.749 94.518 0.0 0.0 0.0 15.618687176938352 15.618687176938352 15.618687176938352 9.128498242810991 0 3.690614065464281 2.0 0.8807196863200843 0.7887254899964358 [VS]QHVDAAAEK;[VS][AG]HVDAAAEK;[VS]AGHVDAAAEK;[VS]QHVD{[NV]|[RG]}EK;[VS]Q{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}AAEK;[VS]QHVAADAEK;[VS]AGHVDAAAA[VS];[VS]AGHVDA[DV]GK;[VS]QHVDAAAA[VS];[VS]Q{M(Oxidation (M))|F}QA{M(Oxidation (M))|F}AEK 10.749;9.9578;9.3952;8.4918;8.4801;8.4559;8.1238;8.0921;8.006;7.7426 -;-;-;-;-;-;-;-;-;- 5462 + 1 3.738 102682.0 0.4900000095367431 143 2585 2726 SUDHL4_400M_050219_1,2730 SUDHL4_400M_050219_1,2730,SVTYWGADKK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2732 11.675 112.0 603420.0 25 0 74219.0 + 36067 SVQHVDAAEK 10 97 361.8525281842932 1082.5357551530797 3 361.8523742556572 MULTI CID FTMS 0 0 0 2731 450272.15625 0.4050009933391745 14 -0.0688085556030273 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 5 HVDAAEK 7 3 31.366 0.0 0.0 2.8975 0.0 0.0 314.1600578763403 0.0 314.1600578763403 0.0 6.841605587590543 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.3252574989159953 + HVDAAEK 2.8975 + + 339 + 1 3.738 59930.9 1.0 144 2586 2731 SUDHL4_400M_050219_1,2732 SUDHL4_400M_050219_1,2732,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2733 11.684 480.0 205140.0 25 0 22945.0 + 25880 NLHTAVNEEK 10 115 385.5319207223204 1153.573932767161 3 385.5314819216728 MULTI CID FTMS 0 0 0 2731 144048.796875 0.733013130372744 -9 0.1234445571899414 2 Unmodified _NLHTAVNEEK_ ENSG00000102010|ENST00000348343|BMX 13.90604991867851 0.6142120002215601 5 [VS]AQ{M(Oxidation (M))|F}AVH 8 9 50.29 0.0 0.0 4.3595 0.0 0.0 0.0 311.13947710306746 311.13947710306746 28.104745638068643 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.2215141619232908 0.2614393726401688 [VS]AQ{M(Oxidation (M))|F}AVH 4.3595 - 921 1 3.738 82643.0 1.0 145 2586 2731 SUDHL4_400M_050219_1,2733 SUDHL4_400M_050219_1,2733,NLHTAVNEEK False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2735 11.69 173.0 320160.0 25 0 73025.0 + 20190 LLAGKSYTRPG 11 83 388.22545051402767 1161.654522142283 3 388.2262145876884 MULTI CID FTMS 0 0 0 2734 137773.34375 0.3114010985906261 8 -0.0339889526367187 1 Unmodified _LLAGKSYTRPG_ REV__ENST00000494911.5_1_11:32457087-32459470:+|nuORF 7.608950283845883 0.8392484121837455 5 P{I|L}T{M(Oxidation (M))|F}KK 6 -1 27.221 0.0 0.0 2.3433 0.0 0.0 429.2358342534142 0.0 429.2358342534142 0.0 16.111986577811575 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.1382104921644452 P{I|L}T{M(Oxidation (M))|F}KK 2.3433 - 122 + 1 3.738 51015.4 1.0 146 2587 2734 SUDHL4_400M_050219_1,2735 SUDHL4_400M_050219_1,2735,LLAGKSYTRPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2761 11.803 800.0 69132.0 25 0 5140.1 + 6243 DTNADKQLS 9 98 496.2384488802229 990.4623448272458 2 496.2384521365166 MULTI CID FTMS 0 0 0 2760 91580.0546875 0.2434590401776628 -24 0.0965766906738281 1 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 53.40400417844725 0.0329064971918313 5 {[ES]|[DT]|[{I|L}C]}NAD[KQ]{I|L}S 9 0 + 36.379 0.0 0.0 3.6729 3.6729 83.897 0.0 0.0 0.0 4.628618393527411 13.05130318649369 4.628618393527411 9.208187539523756 0 1.579689690656103 0.0 1.25 0.0 + + {[ES]|[DT]|[{I|L}C]}NAD[KQ]{I|L}S;{[ES]|[DT]|[{I|L}C]}GGAD[KQ]{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}[QA]N{I|L}C{I|L}S;[HV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[YN]{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}[QA]GG{I|L}C{I|L}S;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}D[KQ]{I|L}S;{[QD]|[EN]|[WG]|[KD]|[RS]}[Q{I|L}]{[QG]|[NA]}C{I|L}S 3.6729;2.7432;2.5569;1.6563;1.6272;1.2385;0.0011563 +;-;-;-;-;-;- + 112 1 3.738 50911.4 0.4199999868869781 147 2612 2760 SUDHL4_400M_050219_1,2761 SUDHL4_400M_050219_1,2761,DTNADKQLS True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2762 11.816 770.0 137310.0 25 0 26484.0 + 3215 AWLSPMNQWGI 11 77 434.8821114689898 0 434.8823730349541 PEAK CID FTMS 0 0 0 2760 96324.8515625 0.6701443430177283 -118 0.7720432281494141 2 Unmodified _AWLSPMNQWGI_ REV__ENSG00000269743|ENST00000594199|SLC25A53 1.4819007175156935 0.4761840153648598 5 R 1 -1 3.0989 0.0 0.0 0.35712 0.0 0.0 600.5804327995047 108.04584680728748 708.6262796067922 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.35712 - 4 + 1 3.738 88590.1 1.0 148 2612 2760 SUDHL4_400M_050219_1,2762 SUDHL4_400M_050219_1,2762,AWLSPMNQWGI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2763 11.83 800.0 55110.0 25 0 3268.1 -1 0 46 927.1618085492177 3704.6181283304704 4 927.4138671755792 MULTI CID FTMS 0 0 0 2760 70842.5546875 0.8633107860830582 -1 0.0040607452392578 3 5 A 1 -1 2.4743 0.0 0.0 0.066788 0.0 0.0 2713.230995617383 917.3370566907936 3630.568052308177 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.066788 - 2 + 1 3.738 39372.0 0.3400000035762787 149 2612 2760 SUDHL4_400M_050219_1,2763 SUDHL4_400M_050219_1,2763, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2766 11.852 800.0 130310.0 25 0 15329.0 + 34582 SPHDPAEK 8 118 440.7116721963219 879.4087914594438 2 440.7118102908134 MULTI CID FTMS 0 0 0 2765 95979.1796875 0.4841584597772829 -6 0.0636558532714843 1 Unmodified _SPHDPAEK_ REV__ENSG00000115221|ENST00000283249|ITGB6;REV__nc|ENSG00000115221|P18564-2|ITGB6 20.453626601364224 0.6087503291685402 5 VDAAEK 6 -1 58.894 0.0 0.0 6.697 0.0 0.0 248.0915868904113 0.0 248.0915868904113 0.0 45.3988972566097 0.0 0.0 0 2.4247425010840047 0.0 0.3807196863200844 0.3494850021680094 VDAAEK 6.697 - 242 + 1 3.738 85692.8 0.4399999976158142 150 2614 2765 SUDHL4_400M_050219_1,2766 SUDHL4_400M_050219_1,2766,SPHDPAEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2767 11.857 326.0 202040.0 25 0 20994.0 + 12042 GQDKPHETY 9 105 358.8336172402852 1073.4790223210557 3 358.8331786990166 MULTI CID FTMS 0 0 0 2765 104402.7734375 0.6039356639771564 -5 0.0597658157348632 2 Unmodified _GQDKPHETY_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 13.042465956692816 0.4836390050082244 5 TY 2 7 19.068 0.0 0.0 1.7763 0.0 0.0 791.3573925376558 0.0 791.3573925376558 0.0 10.115618994235689 0.0 0.0 0 0.5 0.0 0.0 0.0 + TY 1.7763 + + 46 + 1 3.738 58219.7 1.0 151 2614 2765 SUDHL4_400M_050219_1,2767 SUDHL4_400M_050219_1,2767,GQDKPHETY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2773 11.886 550.0 137900.0 25 0 13906.0 31380 RNVSTGDVN 9 105 481.238686171027 960.462819408854 2 481.2392150759697 MULTI CID FTMS 0 0 0 2772 65141.375 0.6701702444300878 1 -0.035684585571289 1 Unmodified _RNVSTGDVN_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 19.361941925380144 0.3125782356748823 5 VN 2 7 31.51 0.0 0.0 3.2807 0.0 0.0 729.3403809096337 0.0 729.3403809096337 0.0 15.056584229283844 0.0 0.0 0 1.0 0.0 0.0 0.4035984316004219 + VN 3.2807 + + 384 + 1 3.738 61860.7 1.0 152 2619 2772 SUDHL4_400M_050219_1,2773 SUDHL4_400M_050219_1,2773,RNVSTGDVN False True GQPHEGSSY 11.88573 481.23921507597 2502223.5 2772.0 ENSG00000161920|ENST00000293777|MED11 3.354630072911581 2.0 False 9.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 2774 11.895 551.0 141680.0 25 0 14097.0 12171 GQPHEGSSY 9 107 481.2044223367879 960.3942917403758 2 481.2042419314384 MULTI CID FTMS 0 0 0 2772 92114.3671875 0.6205255898462885 -16 0.123631477355957 2 Unmodified _GQPHEGSSY_ ENSG00000161920|ENST00000293777|MED11 16.942295170755138 0.3780752226737986 5 VN 2 9 19.821 0.0 0.0 2.0638 0.0 0.0 729.2723110048274 0.0 729.2723110048274 0.0 0.1362844397504368 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 VN 2.0638 - 194 + 1 3.738 64466.1 1.0 153 2619 2772 SUDHL4_400M_050219_1,2774 SUDHL4_400M_050219_1,2774,GQPHEGSSY False True RNVSTGDVN 11.895403 481.204241931438 352692.90625 2772.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 0.4565895746151606 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2775 11.909 800.0 64321.0 25 0 4719.9 + 12043 GQDKPHETY 9 104 537.7464389667562 0 537.7464477419853 PEAK CID FTMS 0 0 0 2772 90898.3359375 1.0 0 0.0 3 Unmodified _GQDKPHETY_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 43.9818466556824 0.048129023470176 5 DKPHET 6 3 24.144 0.0 0.0 2.2491 0.0 0.0 185.07872167279453 178.05092798404533 363.1296496568399 0.0 0.0 0.0 0.0 0 2.167735320183944 0.0 0.3494850021680094 0.0 + DKPHET 2.2491 + + 105 + 1 3.738 43197.3 0.4300000071525574 154 2619 2772 SUDHL4_400M_050219_1,2775 SUDHL4_400M_050219_1,2775,GQDKPHETY True True GQDKPHETY 11.909236 537.746447741985 823431.46875 2772.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 8.199882507324219 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2777 11.914 15.0 2310200.0 25 0 304710.0 + 34866 SQGFSHSQM 9 65 512.7112693500856 1023.4079857669713 2 512.7115356326103 MULTI CID FTMS 0 0 0 2776 3575539.25 0.6140006671420519 6 -0.0603542327880859 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 57.72198328787511 0.0273433238377839 5 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 38.495 0.0 0.0 3.7615 3.7615 78.018 0.0 0.0 0.0 8.568532812289703 8.568532812289703 8.568532812289703 3.4678748622465605 0 0.8182503180159344 0.0 0.6694451763165201 0.3494850021680094 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]SW{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F} 3.7615;3.4226;2.9242;2.8622;2.8617;2.5233;2.5176;2.4902;1.9624;1.8514 -;-;-;-;-;-;-;-;-;- 158 1 3.738 32654.4 1.0 155 2620 2776 SUDHL4_400M_050219_1,2777 SUDHL4_400M_050219_1,2777,SQGFSHSQM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2778 11.916 72.0 875690.0 25 0 80597.0 + + 35718 SVQHVDAAEK 10 83 542.7671315945431 1083.519710255886 2 542.7671386599541 MULTI CID FTMS 0 0 0 2776 895672.5625 1.0 0 0.0 2 Unmodified _SVHEEVQEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 41.95555342248728 0.0647214845423414 5 [VS]EHVDAAEK 10 -1 + 103.17 0.0 0.0 9.5215 9.5215 98.196 0.0 0.0 0.0 12.11127163555986 12.11127163555986 12.11127163555986 21.972353285392643 0 3.247425010840047 2.0 0.805462187404089 0.3252574989159953 [VS]EHVDAAEK;[VS]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[VS]EHVDAAA[VS];{[YC]|[HE]}VSVDAAEK;[VS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{M(Oxidation (M))|F}AEK;{[YC]|[HE]}VSVDAAA[VS];[HV]ESVDAAEK;[VS]EHVD{[NV]|[RG]}[VS];[HV]ESVDAAA[VS];{[YC]|[HE]}VQE[VS]EK 9.5215;7.4936;7.1659;6.7451;6.7307;5.5073;5.4302;4.8779;4.1924;3.4205 -;-;-;-;-;-;-;-;-;- 503 + 1 3.738 50968.1 1.0 156 2620 2776 SUDHL4_400M_050219_1,2778 SUDHL4_400M_050219_1,2778,SVHEEVQEK False False SVQHVDAAEK 11.915713 542.767138659954 0.0 2776.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 2.09496545791626 2.0 False 10.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2779 11.921 267.0 158330.0 25 0 9589.4 + -1 KMFFWEYQR 9 78 450.8826325479841 1349.6260682441523 3 451.2178222537041 MULTI CID FTMS 0 0 0 2776 92709.515625 0.2860807697930331 -21 0.1753835678100586 3 Oxidation (M) _KM(Oxidation (M))FFWEYQR_ REV__ENSG00000175874|ENST00000324768|CREG2 4.897010918128616 0.7437319958283661 5 NT{M(Oxidation (M))|F}QR 5 -1 34.412 0.0 0.0 2.5498 0.0 0.0 685.2983227380961 0.0 685.2983227380961 0.0 19.49092531119419 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 NT{M(Oxidation (M))|F}QR 2.5498 - 101 + 1 3.738 39073.5 1.0 157 2620 2776 SUDHL4_400M_050219_1,2779 SUDHL4_400M_050219_1,2779,KMFFWEYQR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2780 11.934 800.0 106940.0 25 0 12772.0 + 33414 SHELSQDDPH 10 100 582.7495284947223 1163.4845040562443 2 582.7496826052666 MULTI CID FTMS 0 0 0 2776 100086.9609375 0.6232936834835042 -4 0.0476894378662109 4 Unmodified _SHELSQDDPH_ REV__ENST00000382751.3_1_21:33687168-33687225:-|nuORF 26.268140514670165 0.3785003716575977 5 HEQSEH 6 -1 72.203 0.0 0.0 6.2057 0.0 0.0 398.18167411782 0.0 398.18167411782 0.0 57.82969359948829 0.0 0.0 0 2.1989700043360187 0.0 1.5356668758921828 0.3252574989159953 HEQSEH 6.2057 - 518 + 1 3.738 71499.2 0.4399999976158142 158 2620 2776 SUDHL4_400M_050219_1,2780 SUDHL4_400M_050219_1,2780,SHELSQDDPH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2782 11.94 48.0 1200400.0 25 0 161660.0 + 7519 EHTPSASVAVS 11 87 362.1805474370024 1083.5198129112073 3 362.1804687380791 MULTI CID FTMS 0 0 0 2781 970054.4375 0.9501767400971672 1 -0.0190315246582031 1 Unmodified _EHTPSASVAVS_ REV__ENSG00000181143|ENST00000397910|MUC16 34.40172386719151 0.2986346176549658 5 HVDAAEK 7 -1 39.003 0.0 0.0 3.5996 0.0 0.0 315.14398421410937 0.0 315.14398421410937 0.0 1.2147237007817893 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3054621874040891 HVDAAEK 3.5996 - 233 + 1 3.738 53217.0 1.0 159 2621 2781 SUDHL4_400M_050219_1,2782 SUDHL4_400M_050219_1,2782,EHTPSASVAVS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2783 11.953 800.0 68455.0 25 0 5655.0 + 33065 SEQPLTSQSQS 11 99 596.2784643663507 1190.542375799501 2 596.2784911990166 MULTI CID FTMS 0 0 0 2781 86342.078125 0.5440500535741167 -9 0.1481857299804687 2 Unmodified _SEQPLTSQSQS_ REV__ENSG00000153820|ENST00000392056|SPHKAP;REV__nc|ENSG00000153820|Q2M3C7-2|SPHKAP 28.49450938151212 0.4231428536161201 5 Q[PS]D[{I|L}P]TN 8 -1 47.752 0.0 0.0 4.011 0.0 0.0 320.1324769731325 0.0 320.1324769731325 0.0 19.07184475556717 0.0 0.0 0 0.7742275032520141 0.0 1.110924374808178 0.3494850021680094 Q[PS]D[{I|L}P]TN 4.011 - 625 + 1 3.738 46727.5 0.4000000059604645 160 2621 2781 SUDHL4_400M_050219_1,2783 SUDHL4_400M_050219_1,2783,SEQPLTSQSQS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2797 12.02 800.0 80025.0 25 0 24734.0 + -1 RTEVCMAEIEL 11 50 675.8204154857116 1349.626278038223 2 675.8209716677666 MULTI CID FTMS 0 0 0 2796 62427.7421875 0.7285951743996265 1 -0.0177059173583984 1 Carbamidomethyl (C) _RTEVC(Carbamidomethyl (C))MAEIEL_ REV__ENST00000535315.5_1_12:66006973-66035915:-|nuORF;REV__ENST00000546198.5_1_12:65981221-66035915:-|nuORF 4.897010918128616 0.8520435188433833 5 RT 2 -1 25.846 0.0 0.0 1.9151 0.0 0.0 0.0 1089.4540499322875 1089.4540499322875 5.361505008364826 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.5 0.0 RT 1.9151 + + 7 + 1 3.738 52620.2 0.3799999952316284 161 2634 2796 SUDHL4_400M_050219_1,2797 SUDHL4_400M_050219_1,2797,RTEVCMAEIEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2804 12.047 228.0 199510.0 25 0 21338.0 + 6244 DTNADKQLS 9 88 496.2384488802229 990.4623448272458 2 496.2379943728447 MULTI CID FTMS 0 0 0 2803 298196.1875 0.792733285005316 4 -0.0326757431030273 1 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 81.9152076656658 0.0170527153246128 5 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S 9 0 + 68.201 0.0 0.0 6.8858 6.8858 92.256 0.0 0.0 0.0 4.628618393527404 41.73082284279785 4.628618393527404 9.208187539523747 0 2.4564608101803795 0.0 1.2302046884880935 0.3252574989159953 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK{I|L}QS;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADK{I|L}QS;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}DKQ{I|L}S;[AG]G{[ES]|[DT]|[{I|L}C]}DKQ{I|L}S;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}DK[AG]{I|L}S;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}DK{I|L}QS 6.8858;5.9561;5.9561;5.3554;5.0308;4.4257;4.1323;3.3521;3.2026;2.6018 +;-;-;-;-;-;-;-;-;- + 233 1 3.738 43827.1 1.0 162 2640 2803 SUDHL4_400M_050219_1,2804 SUDHL4_400M_050219_1,2804,DTNADKQLS True True DTNADKQLS 12.0466 496.237994372845 9898614.0 2803.0 ENSG00000163220|ENST00000368738|S100A9 8.158512910207113 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2805 12.06 800.0 75546.0 25 0 9288.3 -1 LSCPWNLSQG 10 94 581.2730092674967 1160.5314656017931 2 581.2737914919853 MULTI CID FTMS 0 0 0 2803 94607.8046875 0.2060570093488477 -18 0.0862646102905273 2 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 36.506200033944 0.1944608063770638 5 {[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}SP[HA]{M(Oxidation (M))|F}AN 11 -1 + 60.009 0.0 0.0 5.1709 5.1709 89.414 0.0 0.0 0.0 7.850910449460464 13.230695189565049 7.850910449460464 13.230695189565049 0 1.024227503252014 1.6989700043360187 0.4247425010840047 0.7059771852360797 {[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}SP[HA]{M(Oxidation (M))|F}AN;{[DA]|[EG]}[TA]{[TV]|[{I|L}S]}PSQS{[QG]|[NA]};[{I|L}T][QT]DPSQS{[QG]|[NA]};[{I|L}T][QT]DPS[AG]S{[QG]|[NA]};{[SA]|[TG]}GP{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}QS{[QG]|[NA]};{[QS]|[NT]}P{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}QS{[QG]|[NA]};[PS]Q{NN|[MP]|[D{I|L}]|[EV]}{[DS]|[MA]|[CV]|TT}QS{[QG]|[NA]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}V]{[DS]|[MA]|[CV]|TT}QS{[QG]|[NA]};{[SA]|[TG]}GP[{M(Oxidation (M))|F}V]P[C(Carbamidomethyl (C))Q][KA];{[SA]|[TG]}GGV[{I|L}P]{[C(Carbamidomethyl (C))E]|[WC]}S{[QG]|[NA]} 5.1709;4.0308;3.1881;2.4015;1.9088;1.5773;1.4081;1.0899;0.99619;0.88715 -;-;-;-;-;-;-;-;-;- 611 + 1 3.738 47754.8 0.4600000083446502 163 2640 2803 SUDHL4_400M_050219_1,2805 SUDHL4_400M_050219_1,2805,LSCPWNLSQG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2811 12.093 800.0 95878.0 25 0 27268.0 + 8798 EWEERRRQN 9 72 434.8821114689898 0 434.8821288943291 PEAK CID FTMS 0 0 0 2810 102631.5625 0.7140209396514783 -85 0.6084299087524414 1 Unmodified _EWEERRRQN_ chr19:47272161-47273357|48|34.67|0.0|21.73|+|ENST00000643617|CCDC9,CCDC9;ENSG00000105321|ENST00000221922|CCDC9 1.844237919475145 0.3444685223463735 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.738 67476.5 0.8999999761581421 164 2645 2810 SUDHL4_400M_050219_1,2811 SUDHL4_400M_050219_1,2811,EWEERRRQN False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2817 12.119 407.0 162060.0 25 0 17374.0 + -1 SVRYSSSKH 9 103 364.8526606220462 1091.5361524663383 3 364.8525268435478 MULTI CID FTMS 0 0 0 2816 113391.265625 0.7085869769733479 -10 0.0691719055175781 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SVRYSSSKH_ ENSG00000186395|ENST00000269576|KRT10;P13645 14.95716135407024 0.4318104563536712 5 [KS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HV]VEH 9 -1 [KS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HV]VE + + 16.99 -2.1466 -0.22923 1.5565 1.5565 52.666 0.0 0.0 0.0 0.0 -9.208187539523747 -9.208187539523747 0.0 0 0.0 0.0 0.0 0.0 [KS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HV]VEH 1.5565 - 77 + 1 3.738 58888.2 1.0 165 2650 2816 SUDHL4_400M_050219_1,2817 SUDHL4_400M_050219_1,2817,SVRYSSSKH False False SVRYSSSKH 12.118751 364.852526843548 689250.6875 2816.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 0.4106639226277669 3.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2821 12.143 800.0 205820.0 25 0 53784.0 -1 KELRNKQMK 9 162 397.5606083954256 1189.6599957864769 3 397.5604736208916 MULTI CID FTMS 0 0 0 2820 88385.46875 0.3914154003855428 -21 0.1329326629638672 1 Oxidation (M) _KELRNKQM(Oxidation (M))K_ ENSG00000154781|ENST00000383794|CCDC174 18.373094154950223 0.3393451798331396 5 KTT 3 -1 30.367 0.0 0.0 2.5525 0.0 0.0 63.99958777359513 792.4475272335579 856.4471150071531 0.0 0.0 0.0 0.0 0 0.368415180652539 0.0 1.3494850021680094 0.0 KTT 2.5525 - 131 + 1 3.738 131244.7 0.8399999737739563 166 2653 2820 SUDHL4_400M_050219_1,2821 SUDHL4_400M_050219_1,2821,KELRNKQMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2826 12.172 800.0 61853.0 25 0 3732.6 + 12172 GQPHEGSSY 9 92 481.2044223367879 960.3942917403758 2 481.2042114138603 MULTI CID FTMS 0 0 0 2825 77600.421875 0.5227528454740296 22 -0.1556615829467773 1 Unmodified _GQPHEGSSY_ ENSG00000161920|ENST00000293777|MED11 20.453626601364224 0.2830276176381075 5 SY 2 7 22.519 0.0 0.0 2.3447 0.0 0.0 692.2881038515071 0.0 692.2881038515071 0.0 10.924778212679485 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 + SY 2.3447 + + 164 + 1 3.738 45210.8 0.9800000190734864 167 2657 2825 SUDHL4_400M_050219_1,2826 SUDHL4_400M_050219_1,2826,GQPHEGSSY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2828 12.18 236.0 167150.0 25 0 20059.0 + 34867 SQGFSHSQM 9 74 512.7112693500856 1023.4079857669713 2 512.7113525271416 MULTI CID FTMS 0 0 0 2827 245600.015625 0.0421750574948515 44 -0.2757282257080078 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 59.36838082759317 0.0264317782606298 5 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 65.432 0.0 0.0 6.3935 6.3935 91.631 0.0 0.0 0.0 9.831159561447691 9.831159561447691 9.831159561447691 9.208187539523756 0 1.548455006504028 1.0969100130080565 0.2887254899964357 0.9947026752325154 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G[MN]SW{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F} 6.3935;5.4938;5.4329;5.2443;5.1064;4.3446;4.2977;4.2014;3.9572;3.831 -;-;-;-;-;-;-;-;-;- 168 1 3.738 36195.2 1.0 168 2658 2827 SUDHL4_400M_050219_1,2828 SUDHL4_400M_050219_1,2828,SQGFSHSQM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2829 12.194 785.0 72599.0 25 0 8974.5 5938 DQENEIVQYGR 11 83 450.8826325479841 1349.6260682441523 3 450.8826171755791 MULTI CID FTMS 0 0 0 2827 59497.2734375 0.1401226519456561 22 -0.1433639526367187 2 Unmodified _DQENEIVQYGR_ ENSG00000119326|ENST00000325551|CTNNAL1;nc|ENSG00000119326|Q9UBT7-2|CTNNAL1;nc|ENSG00000119326|Q9UBT7-3|CTNNAL1 7.608950283845883 0.8392484121837455 5 NT{M(Oxidation (M))|F}QR 5 8 33.22 0.0 0.0 2.4614 0.0 0.0 685.2967968591898 0.0 685.2967968591898 0.0 14.368128451160516 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 NT{M(Oxidation (M))|F}QR 2.4614 - 69 + 1 3.738 50388.9 1.0 169 2658 2827 SUDHL4_400M_050219_1,2829 SUDHL4_400M_050219_1,2829,DQENEIVQYGR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2833 12.218 779.0 83976.0 25 0 5703.9 + 31591 RQQQSQTAY 9 102 555.2704038875588 1108.5262548419175 2 555.2708007693291 MULTI CID FTMS 0 0 0 2832 70151.140625 0.2243724510132778 -27 0.1997089385986328 1 Unmodified _RQQQSQTAY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 43.77239144664712 0.0547478964384323 5 {[{M(Oxidation (M))|F}H]|[RQ]}QQSQTAY 9 0 + 62.546 0.0 0.0 5.6423 5.6423 88.983 0.0 0.0 0.0 3.2568864632742844 54.5872875024979 3.2568864632742844 9.208187539523747 0 1.1237125054200234 0.0 0.9247425010840048 0.0 + + {[{M(Oxidation (M))|F}H]|[RQ]}QQSQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}[AG]QSQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}Q[AG]SQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}QQS[AG]TAY;{[{M(Oxidation (M))|F}H]|[RQ]}Q[AG]S[AG]TAY;{[{M(Oxidation (M))|F}H]|[RQ]}[AG][AG]SQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}[AG]QS[AG]TAY;{[{M(Oxidation (M))|F}H]|[RQ]}[RD]{[CP]|[EA]}TAY;{[{M(Oxidation (M))|F}H]|[RQ]}[RD][TA]EAY 5.6423;4.8116;4.8116;4.8116;3.9849;3.9849;3.9849;2.035;1.516 +;-;-;-;-;-;-;-;- + 322 1 3.738 56155.0 1.0 170 2661 2832 SUDHL4_400M_050219_1,2833 SUDHL4_400M_050219_1,2833,RQQQSQTAY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2847 12.282 800.0 107300.0 25 0 6563.6 26954 PEARGGLGAP 10 114 462.7487575727652 923.4829622123304 2 462.7481872439384 MULTI CID FTMS 0 0 0 2846 83153.125 0.8330948649246054 -6 0.0242042541503906 1 Unmodified _PEARGGLGAP_ ENSG00000116337|ENST00000528667|AMPD2 9.38312468134398 0.6832340498775793 5 PEA 3 7 20.005 0.0 0.0 2.1663 0.0 0.0 99.033775220838 524.2940168164275 623.3277920372656 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + PEA 2.1663 + + 50 + 1 3.738 71337.3 0.4300000071525574 171 2674 2846 SUDHL4_400M_050219_1,2847 SUDHL4_400M_050219_1,2847,PEARGGLGAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2852 12.302 298.0 193210.0 25 0 29483.0 22890 LSCPWNLSQG 10 89 581.2730092674967 1160.5314656017931 2 581.2726928591728 MULTI CID FTMS 0 0 0 2851 248718.828125 0.5417127906251795 20 -0.1369953155517578 1 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 40.23920728925047 0.1550410903091231 5 {[TV]|[{I|L}S]}[YT]{[YD]|[{M(Oxidation (M))|F}M]}QS 8 7 38.262 0.0 0.0 3.2969 0.0 0.0 0.0 200.06964854540584 200.06964854540584 19.19347469197298 0.0 0.0 0.0 0 1.2614393726401687 1.5228787452803376 0.9247425010840048 0.0 {[TV]|[{I|L}S]}[YT]{[YD]|[{M(Oxidation (M))|F}M]}QS 3.2969 - 328 1 3.738 46946.8 1.0 172 2678 2851 SUDHL4_400M_050219_1,2852 SUDHL4_400M_050219_1,2852,LSCPWNLSQG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2853 12.311 489.0 76962.0 25 0 8121.2 + 6245 DTNADKQLS 9 77 496.2384488802229 990.4623448272458 2 496.2392150759697 MULTI CID FTMS 0 0 0 2851 121385.765625 0.3226953957511332 42 -0.2294158935546875 2 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 53.31671820480216 0.0330978755772958 5 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S 9 0 + 51.99 0.0 0.0 5.249 5.249 87.821 0.0 0.0 0.0 4.232712163289278 35.79190065531627 4.232712163289278 9.208187539523747 0 2.048455006504028 0.0 0.7614393726401688 0.0 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S;{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L}S;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}DKQ{I|L}S;[AG]G{[ES]|[DT]|[{I|L}C]}DKQ{I|L}S;{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}DK[AG]{I|L}S;[AG]G{[ES]|[DT]|[{I|L}C]}DK[AG]{I|L}S;[AG]P[C(Carbamidomethyl (C))M]KQ{I|L}S;[QP][C(Carbamidomethyl (C))M]KQ{I|L}S 5.249;4.3194;4.3194;3.3941;2.8262;2.2904;1.8965;1.3651;1.1261;0.69948 +;-;-;-;-;-;-;-;-;- + 142 1 3.738 33836.8 1.0 173 2678 2851 SUDHL4_400M_050219_1,2853 SUDHL4_400M_050219_1,2853,DTNADKQLS True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2860 12.346 692.0 87183.0 25 0 11426.0 -1 GVVHMKVYD 9 91 532.2668626367752 1062.5191723403502 2 532.2679931521416 MULTI CID FTMS 0 0 0 2859 76122.75 0.7032401317748136 -7 0.040816307067871 1 Oxidation (M) _GVVHM(Oxidation (M))KVYD_ ENSG00000168702|ENST00000389484|LRP1B 7.910154910731844 0.6385446671287552 5 [VG]{[QS]|[NT]}PDSR 8 -1 28.421 0.0 0.0 2.6749 0.0 0.0 0.0 233.11478186036155 233.11478186036155 17.624562618571247 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3807196863200844 [VG]{[QS]|[NT]}PDSR 2.6749 - 180 1 3.738 52792.9 1.0 174 2684 2859 SUDHL4_400M_050219_1,2860 SUDHL4_400M_050219_1,2860,GVVHMKVYD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2864 12.37 800.0 101830.0 25 0 29405.0 13700 HQIQDPKHWN 10 68 434.8821114689898 0 434.8820068240166 PEAK CID FTMS 0 0 0 2863 91424.625 0.6360528385191839 -43 0.2813262939453125 1 Unmodified _HQIQDPKHWN_ nc|ENSG00000164049|Q6X9E4-3|FBXW12 1.4819007175156935 0.3961065659209837 5 P 1 9 4.6041 0.0 0.0 0.53058 0.0 0.0 336.4930914909109 431.1919649713501 767.685056462261 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.53058 + + 1 + 1 3.738 69550.3 0.4199999868869781 175 2687 2863 SUDHL4_400M_050219_1,2864 SUDHL4_400M_050219_1,2864,HQIQDPKHWN False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 2868 12.385 232.0 301980.0 25 0 85189.0 16646 KEKLGLVETSS 11 79 397.5606083954256 1189.6599957864769 3 397.5606567263603 MULTI CID FTMS 0 0 0 2867 150602.046875 0.6669417644114763 16 -0.0891590118408203 1 Unmodified _KEKLGLVETSS_ ENSG00000151148|ENST00000342494|UBE3B;nc|ENSG00000151148|Q7Z3V4-2|UBE3B 10.799506525563784 0.8105043987015127 5 KTE 3 9 26.682 0.0 0.0 2.2429 0.0 0.0 63.99998594172582 764.4530180180934 828.4530039598193 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 KTE 2.2429 - 32 + 1 3.738 58906.2 1.0 176 2690 2867 SUDHL4_400M_050219_1,2868 SUDHL4_400M_050219_1,2868,KEKLGLVETSS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2869 12.394 521.0 155330.0 25 0 11111.0 + 35685 SVESYTGRQK 10 120 385.53174831613165 1153.573415548595 3 385.5315429568291 MULTI CID FTMS 0 0 0 2867 85198.484375 0.6881788216419228 -9 0.0591859817504882 2 Unmodified _SVESYTGRQK_ REV__ENSG00000183542|ENST00000309384|KLRC4 12.240655878213236 0.6421556946785427 5 [VS]AQ[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]AGK 11 -1 + 34.07 0.0 0.0 2.9534 2.9534 83.58 0.0 0.0 0.0 12.51683345664742 6.575773191777934 6.575773191777934 12.51683345664742 0 0.6237125054200234 2.0 0.1803115997617927 0.0 [VS]AQ[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]AGK;{[SA]|[TG]}VQ[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]AGK;[VS]A[{M(Oxidation (M))|F}E]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AGK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}T]AGK;{[SA]|[TG]}V[{M(Oxidation (M))|F}E]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AGK;[KT]{[MG]|[TS]}DV[{M(Oxidation (M))|F}T]AGK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}E]A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AGK 2.9534;1.8684;1.8024;1.4325;0.71731;0.40825;0.28145 -;-;-;-;-;-;- 218 1 3.738 69880.1 1.0 177 2690 2867 SUDHL4_400M_050219_1,2869 SUDHL4_400M_050219_1,2869,SVESYTGRQK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2870 12.402 453.0 136800.0 25 0 19760.0 + 42965 VVSPKSQS 8 73 416.232057299899 830.449561666598 2 416.2317077517509 MULTI CID FTMS 0 0 0 2867 85345.6328125 0.5551676255175106 -40 0.2693014144897461 3 Unmodified _VVSQTAVQ_ ENST00000329099.4_3_17:292627-292744:-|nuORF 20.453626601364224 0.6087503291685402 5 VVSE 4 5 60.86 0.0 0.0 7.3285 0.0 0.0 0.0 413.2136934869751 413.2136934869751 54.66190326687972 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.4247425010840047 0.0 VVSE 7.3285 - 71 + 1 3.738 55836.2 1.0 178 2690 2867 SUDHL4_400M_050219_1,2870 SUDHL4_400M_050219_1,2870,VVSQTAVQ False False VVSPKSQS 12.402331 416.231707751751 2012116.125 2867.0 ENST00000329099.4_3_17:292627-292744:-|nuORF 1.2089627583821614 2.0 False 8.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2878 12.431 92.0 440230.0 25 0 52622.0 + 34868 SQGFSHSQM 9 76 512.7113172204067 1023.4080815076136 2 512.7113525271416 MULTI CID FTMS 0 0 0 2877 621064.4375 0.8017240280387118 -12 0.0808534622192382 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 63.22749603027936 0.0242951379232427 5 {[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F} 9 2 + 54.773 0.0 0.0 5.352 5.352 81.38 0.0 0.0 0.0 2.3256592593472547 2.3256592593472547 2.3256592593472547 2.3256592593472547 0 1.8182503180159344 0.0 0.3252574989159953 0.3494850021680094 {[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]S{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F} 5.352;5.1248;4.3476;4.225;3.7946;3.4478;3.1175;3.0174;2.9866;2.8896 -;-;-;-;-;-;-;-;-;- 146 + 1 3.738 36151.1 1.0 179 2697 2877 SUDHL4_400M_050219_1,2878 SUDHL4_400M_050219_1,2878,SQGFSHSQM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2886 12.463 309.0 180890.0 25 0 11969.0 + 31592 RQQQSQTAY 9 84 555.2704038875588 1108.5262548419175 2 555.2705566287041 MULTI CID FTMS 0 0 0 2885 217008.8125 0.6940842118645999 16 -0.0684080123901367 1 Unmodified _RQQQSQTAY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 45.69961567697781 0.0497987121815769 5 {[{M(Oxidation (M))|F}H]|[RQ]}QQSQTAY 9 0 + 71.648 0.0 0.0 6.4634 6.4634 86.334 0.0 0.0 0.0 3.979400086720375 16.478174818886373 3.979400086720375 3.979400086720375 0 1.0 0.0 0.9247425010840048 0.3807196863200844 + + {[{M(Oxidation (M))|F}H]|[RQ]}QQSQTAY;QQRQSQTAY;[RN]AAQSQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}QQS[AG]TAY;{[{M(Oxidation (M))|F}H]|[RQ]}[AG]QSQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}Q[AG]SQTAY;QQRQS[AG]TAY;QQR[AG]SQTAY;[RN]AA[AG]SQTAY;[RN]AAQS[AG]TAY 6.4634;6.1044;5.8645;5.6327;5.6327;5.6327;5.2737;5.2737;5.0378;5.0378 +;-;-;-;-;-;-;-;-;- + 526 1 3.738 49078.7 1.0 180 2704 2885 SUDHL4_400M_050219_1,2886 SUDHL4_400M_050219_1,2886,RQQQSQTAY True True RQQQSQTAY 12.463493 555.270556628704 5815070.5 2885.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 7.677549362182617 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2907 12.556 800.0 105530.0 25 0 14186.0 -1 IRAPTTMK 8 116 467.26307040066274 932.5115878681256 2 467.2632934451103 MULTI CID FTMS 0 0 0 2906 58620.828125 0.1106525330438702 -47 0.2495355606079101 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 19.256988751693697 0.6264283240490721 5 T{M(Oxidation (M))|F}K 3 -1 33.065 0.0 0.0 3.5458 0.0 0.0 538.3219954382412 0.0 538.3219954382412 0.0 17.614597825623463 0.0 0.0 0 1.0 0.0 0.0 0.2887254899964357 T{M(Oxidation (M))|F}K 3.5458 + + 120 + 1 3.738 69224.9 0.4099999964237213 181 2724 2906 SUDHL4_400M_050219_1,2907 SUDHL4_400M_050219_1,2907,IRAPTTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2914 12.593 800.0 105910.0 25 0 10144.0 + 28494 PTKGRADLTQ 10 89 543.798905276497 1085.5832576197938 2 543.7988769412041 MULTI CID FTMS 0 0 0 2913 71231.0546875 0.0191097080836114 -44 0.2265949249267578 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 17.44264345198275 0.5548713957087773 5 TPKV[YN]GTP 9 -1 74.659 0.0 0.0 6.8773 0.0 0.0 0.0 125.07216821842032 125.07216821842032 60.4580272014703 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.4247425010840047 0.0 TPKV[YN]GTP 6.8773 - 370 + 1 3.738 71020.1 0.4199999868869781 182 2730 2913 SUDHL4_400M_050219_1,2914 SUDHL4_400M_050219_1,2914,PTKGRADLTQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2926 12.638 102.0 568190.0 25 0 30189.0 38128 TPLYFFISV 9 95 362.868399790204 1085.583369970812 3 362.8681823611259 MULTI CID FTMS 0 0 0 2925 533822.9375 0.0542734805832206 -32 0.1531867980957031 1 Unmodified _TPLYFFISV_ ENSG00000180433|ENST00000641861|OR6K6;nc|ENSG00000180433|Q8NGW6|OR6K6 16.942295170755138 0.3780752226737986 5 {[VA]|[{I|L}G]}RDNSK[TP]V 10 9 + 43.817 0.0 0.0 4.0363 4.0363 87.883 0.0 0.0 0.0 1.4215905896025305 34.63615337528019 1.4215905896025305 43.8173657553704 0 0.8182503180159344 0.0 1.1989700043360187 0.0 {[VA]|[{I|L}G]}RDNSK[TP]V 4.0363 - 209 1 3.738 57988.2 1.0 183 2741 2925 SUDHL4_400M_050219_1,2926 SUDHL4_400M_050219_1,2926,TPLYFFISV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2927 12.651 800.0 113780.0 25 0 13806.0 + -1 TPTIRTMK 8 112 482.2681685114971 962.5217840897942 2 482.2673217654228 MULTI CID FTMS 0 0 0 2925 87880.8359375 0.3140473650696654 -26 0.1291713714599609 2 Oxidation (M) _TPTIRTM(Oxidation (M))K_ REV__ENSG00000135447|ENST00000257905|PPP1R1A 24.020572477871973 0.5389365498350341 5 ST{M(Oxidation (M))|F}K 4 -1 32.423 0.0 0.0 3.3685 0.0 0.0 481.3083879489723 0.0 481.3083879489723 0.0 7.323937598229691 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.2742275032520141 ST{M(Oxidation (M))|F}K 3.3685 - 304 + 1 3.738 76774.8 0.4199999868869781 184 2741 2925 SUDHL4_400M_050219_1,2927 SUDHL4_400M_050219_1,2927,TPTIRTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2929 12.66 325.0 166590.0 25 0 21459.0 + 42957 VVSPKSQS 8 78 416.232057299899 830.449561666598 2 416.2322875857353 MULTI CID FTMS 0 0 0 2928 109888.25 0.7148157066080058 12 -0.0929603576660156 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 14.838274106304384 0.6917062315640577 5 VVSPASS[KG] 9 4 + 45.625 0.0 0.0 5.494 5.494 89.968 0.0 0.0 0.0 30.87082789381241 2.3764301679958777 2.3764301679958777 10.457574905606748 0 0.805462187404089 2.0 0.0 0.0 VVSPASS[KG];VVSE{[NV]|[RG]}[KG] 5.494;4.2348 -;- 85 + 1 3.738 50332.0 1.0 185 2742 2928 SUDHL4_400M_050219_1,2929 SUDHL4_400M_050219_1,2929,VVSPKSQS False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2934 12.688 800.0 38913.0 25 0 2644.2 -1 0 32 1102.4889313315398 3304.44496459482 3 1102.823291003704 MULTI CID FTMS 0 0 0 2933 28477.021484375 0.3688114909892558 -2 0.0081367492675781 1 5 AT 2 -1 12.959 0.0 0.0 0.39216 0.0 0.0 2295.036559025567 834.3014620416624 3129.3380210672294 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 AT 0.39216 - 11 + 1 3.738 30370.0 0.3300000131130218 186 2746 2933 SUDHL4_400M_050219_1,2934 SUDHL4_400M_050219_1,2934, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2935 12.702 800.0 22582.0 25 0 1913.2 -1 0 39 827.1182973825574 3304.4440836638296 4 827.3698608279228 MULTI CID FTMS 0 0 0 2933 61462.37890625 1.0 0 0.0 2 5 AT 2 -1 15.701 0.0 0.0 0.47515 0.0 0.0 2295.0367534818374 834.3005465143186 3129.337299996156 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 AT 0.47515 - 8 + 1 3.738 23746.0 0.3400000035762787 187 2746 2933 SUDHL4_400M_050219_1,2935 SUDHL4_400M_050219_1,2935, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 2937 12.708 159.0 224620.0 25 0 20444.0 + 34869 SQGFSHSQM 9 73 512.7113172204067 1023.4080815076136 2 512.7113525271416 MULTI CID FTMS 0 0 0 2936 235790.6875 0.3043791406210038 38 -0.2928733825683594 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 43.9818466556824 0.0535980856389242 5 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 42.712 0.0 0.0 4.1735 4.1735 82.269 0.0 0.0 0.0 7.852036608700594 7.852036608700594 7.852036608700594 7.517346757967545 0 1.5044321917401078 0.0 0.3807196863200844 0.6747425010840047 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F} 4.1735;3.439;3.4063;3.2737;2.5339;1.7014;1.3903 -;-;-;-;-;-;- 109 1 3.738 31998.4 1.0 188 2747 2936 SUDHL4_400M_050219_1,2937 SUDHL4_400M_050219_1,2937,SQGFSHSQM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2941 12.732 800.0 123050.0 25 0 9799.3 + 35734 SVHNELEK 8 112 478.246378509896 954.478204086592 2 478.2461730837822 MULTI CID FTMS 0 0 0 2940 82271.515625 0.6843878140899058 -1 0.004073143005371 1 Unmodified _SVHNELEK_ ENSG00000213347|ENST00000439742|MXD3;ENST00000503473.5_1_5:176737667-176737736:-|nuORF;nc|ENSG00000213347|Q9BW11-3|MXD3;nc|ENSG00000213347|Q9BW11-4|MXD3 41.8396318013385 0.2035142800366642 5 [VS]HVDAAEK 9 4 + 72.805 0.0 0.0 7.6278 7.6278 97.034 0.0 0.0 0.0 35.69242387568712 16.2101498947667 16.2101498947667 28.41226770415493 0 2.118415180652539 2.0 0.3807196863200844 0.2742275032520141 [VS]HVDAAEK;[VS]H[DG]{I|L}AEK;[VS]HV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EQ;[VS]H[TA][PS]EK;[HV]SV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EQ;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}DAAEK;[VS]H[TA][PG]{[WT]|[RM]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VHAP;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAD[Q{I|L}]Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[VS]{M(Oxidation (M))|F}EK 7.6278;4.651;4.6059;4.4781;4.2665;3.2494;2.644;1.7843;1.68;1.3191 -;-;-;-;-;-;-;-;-;- 358 + 1 3.738 78168.1 0.4199999868869781 189 2750 2940 SUDHL4_400M_050219_1,2941 SUDHL4_400M_050219_1,2941,SVHNELEK False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2951 12.771 208.0 214920.0 25 0 14041.0 28435 PTALFTHRCV 10 91 382.2035808407348 1143.5889131224044 3 382.2040893435478 MULTI CID FTMS 0 0 0 2950 213190.234375 0.8522879709441242 -2 0.0079498291015625 1 Unmodified _PTALFTHRCV_ ENSG00000136011|ENST00000388887|STAB2 13.90604991867851 0.6142120002215601 5 [TP]AATGSRS[TP]V 12 7 + 60.345 0.0 0.0 5.2768 5.2768 83.245 0.0 0.0 0.0 4.168850959613586 20.21652514092061 4.168850959613586 4.168850959613586 0 0.5 1.5228787452803376 0.805462187404089 0.0 [TP]AATGSRS[TP]V;{[QD]|[EN]|[WG]|[KD]|[RS]}PTGSDK[TP]V;[EP][KS]GSRS[TP]V;[KP]DTGSRS[TP]V;{[QD]|[EN]|[WG]|[KD]|[RS]}PTGSRS[TP]V;{[VA]|[{I|L}G]}[RD]GSDK[TP]V;{[QD]|[EN]|[WG]|[KD]|[RS]}PTGSR{[RE]|[WV]}V;{[QD]|[EN]|[WG]|[KD]|[RS]}PTGS[VG]S[TP]V;[KP]{[WS]|[C(Carbamidomethyl (C)){I|L}]}SDK[TP]V;[KP]DTGS[VG]{[RE]|[WV]}V 5.2768;4.9123;4.7679;4.7434;4.649;4.1567;4.074;3.8508;3.7356;3.367 -;-;-;-;-;-;-;-;-;- 313 1 3.738 45240.9 1.0 190 2759 2950 SUDHL4_400M_050219_1,2951 SUDHL4_400M_050219_1,2951,PTALFTHRCV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2956 12.8 800.0 82872.0 25 0 8376.0 38084 TPKDDWAALK 10 80 572.8019941853089 1143.5894354374177 2 572.8018066287041 MULTI CID FTMS 0 0 0 2955 77727.9765625 0.906217115615042 1 -0.0163888931274414 1 Unmodified _TPKDDWAALK_ ENSG00000187531|ENST00000328666|SIRT7;ENST00000572976.5_1_17:79870294-79872532:-|nuORF;ENST00000574153.1_1_17:79871648-79872097:-|nuORF;ENST00000574992.5_1_17:79871648-79872373:-|nuORF;nc|ENSG00000187531|Q9NRC8-3|SIRT7 12.872603262515298 0.6315522313594999 5 [TP]KDM 5 6 50.317 0.0 0.0 4.4 0.0 0.0 0.0 568.2951143854124 568.2951143854124 35.092458915632925 0.0 0.0 0.0 0 1.2614393726401687 1.6989700043360187 0.0 0.0 [TP]KDM 4.4 - 295 + 1 3.738 57091.0 0.4199999868869781 191 2763 2955 SUDHL4_400M_050219_1,2956 SUDHL4_400M_050219_1,2956,TPKDDWAALK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2958 12.805 134.0 458410.0 25 0 80224.0 -1 IRAPTTMK 8 65 467.26307040066274 932.5115878681256 2 467.2630798220634 MULTI CID FTMS 0 0 0 2957 479011.3125 0.904180592122843 -7 0.0430269241333007 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 19.256988751693697 0.6264283240490721 5 KTT{I|L} 4 -1 43.047 0.0 0.0 4.6163 0.0 0.0 63.99855787995313 422.22821985416255 486.2267777341157 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.805462187404089 0.4247425010840047 KTT{I|L} 4.6163 - 104 + 1 3.738 54146.5 1.0 192 2764 2957 SUDHL4_400M_050219_1,2958 SUDHL4_400M_050219_1,2958,IRAPTTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2959 12.81 280.0 228460.0 25 0 25875.0 28204 PQGPPPWRQAA 11 96 402.2106857606045 1203.6102278820135 3 402.2104064822197 MULTI CID FTMS 0 0 0 2957 120607.625 0.5284796394428036 -5 0.0350770950317382 2 Unmodified _PQGPPPWRQAA_ ENSG00000176087|ENST00000323146|SLC35A4 5.731851221503515 0.8481046878870278 5 {[SA]|[TG]}[WK]T{I|L}AADNK 11 10 {[SA]|[TG]}[WK]T + + 26.635 4.5552 0.79458 2.2129 2.2129 53.089 0.0 0.0 0.0 0.0 17.655396956255565 0.0 0.0 0 0.0 0.0 0.0 0.9802046884880936 {[SA]|[TG]}[WK]T{I|L}AADNK 2.2129 - 136 + 1 3.738 52897.7 1.0 193 2764 2957 SUDHL4_400M_050219_1,2959 SUDHL4_400M_050219_1,2959,PQGPPPWRQAA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2962 12.831 800.0 79077.0 25 0 4380.8 37107 TGTAVQLSWEL 11 100 602.8123698068446 1203.610186680489 2 602.8119384646416 MULTI CID FTMS 0 0 0 2961 83732.8828125 0.6081445269478419 -2 0.0146045684814453 1 Unmodified _TGTAVQLSWEL_ ENSG00000110046|ENST00000377264|ATG2A;nc|ENSG00000110046|Q2TAZ0-3|ATG2A 24.228606790798544 0.5233075621731543 5 GTTADK{I|L}AADNK 12 9 + 133.19 0.0 0.0 11.066 11.066 94.522 0.0 0.0 0.0 113.65991947682164 17.11346306083223 17.11346306083223 9.098233696509112 0 2.721848749616356 1.0457574905606752 0.0 1.7196100389531246 GTTADK{I|L}AADNK;GTTADK{I|L}AADGGK;GTTWRRADNK;GTTADRRWNK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WK{I|L}AADNK;GTTWRRADGGK;GTTADRRWGGK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}WK{I|L}AADGGK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADRRADNK;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK[RV]DNK 11.066;10.31;8.0174;7.4334;7.256;7.256;6.672;6.4946;6.4438;5.7501 -;-;-;-;-;-;-;-;-;- 1669 + 1 3.738 49512.6 0.4199999868869781 194 2766 2961 SUDHL4_400M_050219_1,2962 SUDHL4_400M_050219_1,2962,TGTAVQLSWEL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2963 12.84 525.0 159500.0 25 0 8354.3 + 43496 WWRVCDQNA 9 115 589.2657573138599 1176.5169616945198 2 589.2642089724541 MULTI CID FTMS 0 0 0 2961 85564.5625 0.4075150330800317 -6 0.0431900024414062 2 Unmodified _WWRVCDQNA_ REV__ENST00000523376.5_1_11:14926604-14927012:+|nuORF 19.256988751693697 0.3154191944385105 5 DQQAEDH 7 -1 53.136 0.0 0.0 4.5164 0.0 0.0 88.06397165954998 262.1198824518188 350.1838541113688 0.0 0.0 0.0 0.0 0 0.6421590589602533 0.0 0.6505149978319906 0.4247425010840047 DQQAEDH 4.5164 - 1369 + 1 3.738 66018.3 1.0 195 2766 2961 SUDHL4_400M_050219_1,2963 SUDHL4_400M_050219_1,2963,WWRVCDQNA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2965 12.845 21.0 3168100.0 25 0 355670.0 + 28495 PTKGRADLTQ 10 72 543.798905276497 1085.5832576197938 2 543.7989379763603 MULTI CID FTMS 0 0 0 2964 2927060.75 0.7852653132947729 -7 0.0688199996948242 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 22.65808497894818 0.4596126414678359 5 TPKV[YN]GTP 9 -1 78.466 0.0 0.0 7.228 0.0 0.0 0.0 125.0723818414672 125.0723818414672 57.49668131245279 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.805462187404089 0.0 TPKV[YN]GTP 7.228 - 242 + 1 3.738 55463.5 1.0 196 2767 2964 SUDHL4_400M_050219_1,2965 SUDHL4_400M_050219_1,2965,PTKGRADLTQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2966 12.859 800.0 81398.0 25 0 10767.0 + -1 TQMTITTQK 9 87 534.2740153290373 0 534.2745239138603 PEAK CID FTMS 0 0 0 2964 86742.578125 1.0 0 0.0 2 Oxidation (M) _TQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 27.22323531849824 0.1355901598355292 5 {M(Oxidation (M))|F}T{I|L}TT 5 -1 28.188 0.0 0.0 2.6429 0.0 0.0 229.1074651747802 271.1413973443969 500.2488625191771 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}T{I|L}TT 2.6429 + + 28 + 1 3.738 56603.8 0.4300000071525574 197 2767 2964 SUDHL4_400M_050219_1,2966 SUDHL4_400M_050219_1,2966,TQMTITTQK False False TQMTITTQK 12.858739 534.27452391386 621925.6875 2964.0 ENSG00000181143|ENST00000397910|MUC16 7.012533346811931 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2972 12.891 800.0 165300.0 25 0 15620.0 + 33321 SFVVAGFVLY 10 144 367.8696165249924 1100.5870201751773 3 367.8690978884697 MULTI CID FTMS 0 0 0 2971 50568.46484375 0.4835788608623378 1 -0.0163812637329101 1 Unmodified _SFVVAGFVLY_ REV__ENSG00000135750|ENST00000366621|KCNK1 6.723162845929126 0.6955379296933136 5 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 1.3269 0.0 0.0 935.5406467394336 0.0 935.5406467394336 0.0 -0.3444064470390628 -0.3444064470390628 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3269 + + 72 + 1 3.738 110666.3 0.449999988079071 198 2772 2971 SUDHL4_400M_050219_1,2972 SUDHL4_400M_050219_1,2972,SFVVAGFVLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2974 12.896 5.4 7731600.0 25 0 413440.0 + 42031 VQSRVSNPTV 10 81 362.868399790204 1085.583369970812 3 362.8684875369072 MULTI CID FTMS 0 0 0 2973 9835797.0 1.0 0 0.0 1 Unmodified _VQSRVSNPTV_ REV__ENSG00000175809|ENST00000323684|CBLL2 20.41453444215458 0.5050059513928961 5 {[VA]|[{I|L}G]}RDNSKPTV 10 -1 + 63.689 0.0 0.0 5.8668 5.8668 80.165 0.0 0.0 0.0 0.3914956475299078 6.743565832589269 0.3914956475299078 0.3914956475299078 0 0.8182503180159344 0.0 1.1861818737241734 0.0 {[VA]|[{I|L}G]}RDNSKPTV;[TP]KGS[SG]RPTV;[KP]TGS[SG]RPTV;{[VA]|[{I|L}G]}RDGGSKPTV;[TP]K[{M(Oxidation (M))|F}V][TP]PTV;[TP]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}[TP]PTV;{[VA]|[{I|L}G]}RG[DG]SKPTV;[KP]T[{M(Oxidation (M))|F}V][TP]PTV;{[VA]|[{I|L}G]}RGS[DG]KPTV;[PG][KT]S[SG]RPTV 5.8668;5.8308;5.0718;5.0226;4.8739;4.6002;4.1436;4.1149;4.1072;3.4132 -;-;-;-;-;-;-;-;-;- 610 1 3.738 46439.6 1.0 199 2773 2973 SUDHL4_400M_050219_1,2974 SUDHL4_400M_050219_1,2974,VQSRVSNPTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2975 12.902 347.0 189310.0 25 0 28111.0 + -1 GVGNKLTMK 9 83 482.2681685114971 962.5217840897942 2 482.2680847048759 MULTI CID FTMS 0 0 0 2973 212433.265625 0.7591428394026886 6 -0.0559673309326171 2 Oxidation (M) _GVGNKLTM(Oxidation (M))K_ REV__ENST00000604354.1_1_5:180743383-180748792:+|nuORF 24.020572477871973 0.2255576514309169 5 ST{M(Oxidation (M))|F}K 4 -1 39.513 0.0 0.0 4.1052 0.0 0.0 481.3075029392067 0.0 481.3075029392067 0.0 7.213403050078782 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.3054621874040891 ST{M(Oxidation (M))|F}K 4.1052 - 195 + 1 3.738 56923.3 1.0 200 2773 2973 SUDHL4_400M_050219_1,2975 SUDHL4_400M_050219_1,2975,GVGNKLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 2978 12.922 800.0 77093.0 25 0 6795.5 35518 STMSTNGIPR 10 103 540.2610065042873 1078.5074600753744 2 540.2617675662041 MULTI CID FTMS 0 0 0 2977 77587.3203125 0.8002128007593466 1 -0.0163831710815429 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 40.23920728925047 0.1550410903091231 5 R{I|L}GNTSETS 9 9 49.931 0.0 0.0 4.6297 0.0 0.0 115.06387526679843 0.0 115.06387526679843 0.0 36.259103962389005 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 R{I|L}GNTSETS 4.6297 - 449 1 3.738 52579.2 0.5099999904632568 201 2775 2977 SUDHL4_400M_050219_1,2978 SUDHL4_400M_050219_1,2978,STMSTNGIPR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 2981 12.943 800.0 158630.0 25 0 30744.0 -1 RTRKTPPTM 9 94 552.3029709077631 1102.591388882326 2 552.3028442263603 MULTI CID FTMS 0 0 0 2980 146852.9375 0.4462524075135885 -13 0.1270351409912109 1 Oxidation (M) _RTRKTPPTM(Oxidation (M))_ ENSG00000164182|ENST00000296597|NDUFAF2;ENST00000511107.1_1_5:60241248-60448779:+|nuORF 18.1463463914782 0.3454829746528889 5 T{M(Oxidation (M))|F} 2 -1 27.959 0.0 0.0 2.5357 0.0 0.0 836.5013036144725 0.0 836.5013036144725 0.0 8.494850021680094 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 T{M(Oxidation (M))|F} 2.5357 + + 125 1 3.738 99817.4 0.5600000023841858 202 2777 2980 SUDHL4_400M_050219_1,2981 SUDHL4_400M_050219_1,2981,RTRKTPPTM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2989 12.981 688.0 97663.0 25 0 10386.0 + + -1 SQGFSHSQM 9 109 513.2033426051347 1024.392132277069 2 513.2024413943291 MULTI CID FTMS 0 0 0 2988 99043.7421875 0.2816630822620851 -27 0.210301399230957 1 Carbamidomethyl (C) _QSETC(Carbamidomethyl (C))TYH_ ENSG00000181143|ENST00000397910|MUC16 30.22481116460888 0.4082965392918993 5 {[QS]|[NT]}GMDSW{[QS]|[NT]} 9 -1 + 48.323 0.0 0.0 4.7173 4.7173 76.857 0.0 0.0 0.0 18.145292442219745 31.33358635409781 18.145292442219745 0.4891822152615077 0 0.5 0.958607314841775 0.6109243748081782 0.6747425010840047 {[QS]|[NT]}GMDSW{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}ETN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}ETN{M(Oxidation (M))|F};{[QS]|[NT]}GMD{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}E{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}[YQ]H{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]D[HT]{M(Oxidation (M))|F};[HS][YQ]ETN{M(Oxidation (M))|F};{[QS]|[NT]}YY{[{M(Oxidation (M))|F}C]|[YS]}{[QS]|[NT]} 4.7173;4.6695;3.8196;3.7196;3.6894;2.8697;2.208;2.1307;1.017;0.9615 -;-;-;-;-;-;-;-;-;- 231 1 3.738 56186.6 1.0 203 2784 2988 SUDHL4_400M_050219_1,2989 SUDHL4_400M_050219_1,2989,QSETCTYH False False SQGFSHSQM 12.981334 513.202441394329 0.0 2988.0 ENSG00000181143|ENST00000397910|MUC16 1.433251564701398 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2990 12.995 800.0 203230.0 25 0 15666.0 + 38061 TPGKREPQG 9 137 485.2593689677435 968.504185002287 2 485.2593261599541 MULTI CID FTMS 0 0 0 2988 102502.21875 1.0 0 0.0 2 Unmodified _TPGKREPQG_ ENSG00000065675|ENST00000263125|PRKCQ;nc|ENSG00000065675|Q04759-2|PRKCQ;nc|ENSG00000065675|Q04759-3|PRKCQ 41.8396318013385 0.0653578398400075 5 TPR[KC]GTPG 9 5 79.039 0.0 0.0 8.1609 0.0 0.0 0.0 68.05118738345936 68.05118738345936 53.18495371582735 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 1.566901560044258 0.0 TPR[KC]GTPG 8.1609 - 3302 + 1 3.738 125540.6 0.5 204 2784 2988 SUDHL4_400M_050219_1,2990 SUDHL4_400M_050219_1,2990,TPGKREPQG True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 2993 13.011 529.0 170290.0 25 0 96412.0 -1 MKCYQSQKLWQ 11 48 505.9070416199949 0 505.9072753787041 PEAK CID FTMS 0 0 0 2992 177503.859375 0.1157111530251615 141 -0.9955520629882812 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))KC(Carbamidomethyl (C))YQSQKLWQ_ ENSG00000189299|ENST00000339140|FOXR2 0.4545168274142398 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.738 74236.3 1.0 205 2786 2992 SUDHL4_400M_050219_1,2993 SUDHL4_400M_050219_1,2993,MKCYQSQKLWQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3004 13.063 800.0 189700.0 25 0 12343.0 -1 STMSTNGIPR 10 186 360.5092843146092 1078.5060235440276 3 360.5099059939384 MULTI CID FTMS 0 0 0 3003 62513.6484375 0.5861161239549542 -11 0.0519037246704101 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 7.945399516374404 0.6898843699695153 5 PR 2 -1 20.548 0.0 0.0 1.9052 0.0 0.0 807.3412004507489 0.0 807.3412004507489 0.0 4.772702919708967 0.0 0.0 0 0.0 0.0 0.0 0.4349821530037313 PR 1.9052 + + 145 + 1 3.738 124223.0 0.8399999737739563 206 2796 3003 SUDHL4_400M_050219_1,3004 SUDHL4_400M_050219_1,3004,STMSTNGIPR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3006 13.069 166.0 356110.0 25 0 55485.0 + 31804 RSSVNSRK 8 77 467.26307040066274 932.5115878681256 2 467.2632324099541 MULTI CID FTMS 0 0 0 3005 363827.75 0.6867603788078005 26 -0.1823072433471679 1 Unmodified _RSSVNSRK_ REV__ENST00000373824.8_1_1:28929782-28929908:-|nuORF 11.640296217721598 0.738950129755968 5 KT[{I|L}P][WP]K 7 -1 33.53 0.0 0.0 3.5957 0.0 0.0 63.99895065668699 0.0 63.99895065668699 0.0 23.04576644454535 0.0 0.0 0 0.805462187404089 0.0 0.9247425010840048 0.3252574989159953 KT[{I|L}P][WP]K 3.5957 - 32 + 1 3.738 53074.4 1.0 207 2797 3005 SUDHL4_400M_050219_1,3006 SUDHL4_400M_050219_1,3006,RSSVNSRK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3009 13.09 800.0 102390.0 25 0 10778.0 + 13119 HETPAQES 8 118 449.6986203986755 897.382687864151 2 449.6989929080009 MULTI CID FTMS 0 0 0 3008 79116.21875 0.5481078060665079 -9 0.0501356124877929 1 Unmodified _HETPAQES_ ENST00000290573.6_1_2:75061256-75061319:+|nuORF 18.13498045792455 0.6430038125133779 5 {[ES]|[DT]|[{I|L}C]}VQ[WY]S 7 6 + 26.131 0.0 0.0 2.9119 2.9119 73.706 0.0 0.0 0.0 7.2797038756686305 0.0561319334202892 0.0561319334202892 1.3717319302531197 0 0.3054621874040891 0.0 0.1861818737241735 0.6989700043360187 {[ES]|[DT]|[{I|L}C]}VQ[WY]S;{[ES]|[DT]|[{I|L}C]}VQH[DP]S;{[QV]|[N{I|L}]|[RA]|[KV]}SE[WY]S;{[QV]|[N{I|L}]|[RA]|[KV]}SEH[DP]S;{[ES]|[DT]|[{I|L}C]}VQS[WY];[WM][{M(Oxidation (M))|F}T]S{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}[YE]{[WS]|[C(Carbamidomethyl (C)){I|L}]}S;{[ES]|[DT]|[{I|L}C]}[R{M(Oxidation (M))|F}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}S;{[QV]|[N{I|L}]|[RA]|[KV]}SES[WY];{[QV]|[N{I|L}]|[RA]|[KV]}[YC(Carbamidomethyl (C))]NQS 2.9119;2.7591;2.4921;2.3392;1.7627;1.4969;1.3747;1.3511;1.3428;1.31 -;-;-;-;-;-;-;-;-;- 301 + 1 3.738 70323.9 0.449999988079071 208 2799 3008 SUDHL4_400M_050219_1,3009 SUDHL4_400M_050219_1,3009,HETPAQES False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3012 13.098 51.0 1205500.0 25 0 115380.0 + 28496 PTKGRADLTQ 10 71 543.798905276497 1085.5832576197938 2 543.7989990115166 MULTI CID FTMS 0 0 0 3011 1085116.25 0.291112561301469 27 -0.1983184814453125 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 22.65808497894818 0.4596126414678359 5 TPKG[YR]GTP 9 -1 74.715 0.0 0.0 6.8825 0.0 0.0 0.0 125.0723360651 125.0723360651 64.8822875860511 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.805462187404089 0.0 TPKG[YR]GTP 6.8825 - 123 + 1 3.738 51643.8 1.0 209 2801 3011 SUDHL4_400M_050219_1,3012 SUDHL4_400M_050219_1,3012,PTKGRADLTQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3017 13.116 164.0 429710.0 25 0 43629.0 -1 0 96 353.69346796844326 705.3723830036865 2 353.6937744021416 MULTI CID FTMS 0 0 0 3016 368558.5 0.953610864004753 -2 0.0081539154052734 1 5 TP{I|L}T{M(Oxidation (M))|F}K 6 -1 + 70.61 0.0 0.0 10.01 10.01 99.287 0.0 0.0 0.0 40.0202495894991 13.429862658764264 13.429862658764264 45.02697515943353 0 0.3494850021680094 2.0 0.3252574989159953 0.1747425010840047 TP{I|L}T{M(Oxidation (M))|F}K;[KT]T{I|L}P{M(Oxidation (M))|F} 10.01;3.6269 -;- 84 + 1 3.738 59936.5 1.0 210 2805 3016 SUDHL4_400M_050219_1,3017 SUDHL4_400M_050219_1,3017, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3021 13.141 800.0 91354.0 25 0 5685.6 + 40298 VGVPSRQSS 9 111 458.7457377404275 915.476922547655 2 458.7458068728447 MULTI CID FTMS 0 0 0 3020 65091.2109375 0.2902976726430878 -22 0.1251983642578125 1 Unmodified _VGVPSRQSS_ REV__ENSG00000130518|ENST00000392413|IQCN;REV__nc|ENSG00000130518|Q9H0B3-5|IQCN;REV__nc|ENSG00000130518|Q9H0B3|IQCN 24.020572477871973 0.2255576514309169 5 VGGP[KS]WSV 9 -1 + 82.124 0.0 0.0 8.9706 8.9706 97.642 0.0 0.0 0.0 72.03553952265706 13.46787486224656 13.46787486224656 18.5636965628467 0 1.2803695511246982 2.0 0.6747425010840047 0.0 VGGP[KS]WSV;VNP[KS]WSV;VGV{[{M(Oxidation (M))|F}H]|[RQ]}[TA]SV;VGGP[KS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P;VGV{[{M(Oxidation (M))|F}H]|[RQ]}CRV;RGP[QT][TA]SV;VGV{[{M(Oxidation (M))|F}H]|[RQ]}{[ET]|[MV]}K;RGP[QT]CRV;VNP[KS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P;[VG]G[TA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RV 8.9706;6.9429;6.2648;5.9372;5.0326;4.4176;4.1625;4.0652;3.9094;3.4433 -;-;-;-;-;-;-;-;-;- 392 + 1 3.738 63495.8 0.4300000071525574 211 2808 3020 SUDHL4_400M_050219_1,3021 SUDHL4_400M_050219_1,3021,VGVPSRQSS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3022 13.147 322.0 290320.0 25 0 87224.0 + + 12286 LRNVSTGD 8 73 430.8882395088808 0 430.8883544802666 PEAK CID FTMS 0 0 0 3020 297774.34375 0.6691227484259206 -187 1.1899099349975586 2 Unmodified _GRRSITFQNPD_ ENSG00000186395|ENST00000269576|KRT10;P13645 3.3557259375316324 0.4761840153648598 5 GTS 3 -1 15.49 0.0 0.0 1.8016 0.0 0.0 132.36148770741164 479.2742708795532 611.6357585869648 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 GTS 1.8016 - 23 + 1 3.738 77669.6 1.0 212 2808 3020 SUDHL4_400M_050219_1,3022 SUDHL4_400M_050219_1,3022,GRRSITFQNPD False False LRNVSTGD 13.146599 430.888354480267 329465.84375 3020.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 2.4087926149368286 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3024 13.155 309.0 188100.0 25 0 9452.7 + -1 NKVRKQPSM 9 98 368.5376678787997 0 368.5377075076103 PEAK CID FTMS 0 0 0 3023 65766.7890625 0.2232371788072164 18 -0.1289930343627929 1 Oxidation (M) _NKVRKQPSM(Oxidation (M))_ REV__ENSG00000102384|ENST00000682095|CENPI;REV__nc|ENSG00000102384|Q92674-2|CENPI 7.101721422024254 0.3444685223463735 5 W 1 -1 0.71334 0.0 0.0 0.097045 0.0 0.0 367.9114875656156 178.0510195367797 545.9625071023953 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.097045 - 2 + 1 3.738 51871.5 1.0 213 2809 3023 SUDHL4_400M_050219_1,3024 SUDHL4_400M_050219_1,3024,NKVRKQPSM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3027 13.17 475.0 149360.0 25 0 21118.0 + 34048 SLLDELAFV 9 87 503.77525901126086 1005.5359650893216 2 503.7746765017509 MULTI CID FTMS 0 0 0 3026 115659.515625 0.8483877992396588 -2 0.012251853942871 1 Unmodified _SLLDELAFV_ ENSG00000148798|ENST00000369849|INA 50.855029805455786 0.0384952370514206 5 T[C(Carbamidomethyl (C))R]GD{I|L}TV 8 7 50.513 0.0 0.0 5.0235 0.0 0.0 85.08978469062656 0.0 85.08978469062656 0.0 15.35789402675583 0.0 0.0 0 0.5 0.0 1.285666875892183 0.3807196863200844 T[C(Carbamidomethyl (C))R]GD{I|L}TV 5.0235 - 317 1 3.738 57628.5 1.0 214 2811 3026 SUDHL4_400M_050219_1,3027 SUDHL4_400M_050219_1,3027,SLLDELAFV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3028 13.18 595.0 97283.0 25 0 9874.7 + 17397 KMNESTRSV 9 74 526.2637874057036 1050.5130218782072 2 526.2640258669853 MULTI CID FTMS 0 0 0 3026 90156.5859375 0.7482299791034539 -10 0.0651674270629882 2 Unmodified _KMNESTRSV_ ENSG00000104738|ENST00000649973|MCM4 24.99096001346401 0.2132109383330889 5 KMNES 5 4 51.81 0.0 0.0 4.9319 0.0 0.0 0.0 458.2397554986938 458.2397554986938 27.11758134947864 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.3807196863200844 + KMNES 4.9319 + + 80 + 1 3.738 49526.7 1.0 215 2811 3026 SUDHL4_400M_050219_1,3028 SUDHL4_400M_050219_1,3028,KMNESTRSV False True KMNESTRSV 13.180203 526.264025866985 436681.9375 3026.0 ENSG00000104738|ENST00000649973|MCM4 5.611060778299968 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3035 13.209 344.0 323460.0 25 0 140930.0 + -1 PAGHTDAT 8 88 406.1828338052342 810.3511146772685 2 406.1830322146416 MULTI CID FTMS 0 0 0 3034 192846.796875 0.8384320956137149 1 -0.0225830078125 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PAGHTDAT_ REV__ENST00000584396.5_2_17:56058088-56059240:-|nuORF 10.183394434864962 0.7604730176254005 5 [HT]SSTS 6 -1 30.621 0.0 0.0 3.7788 0.0 0.0 0.0 207.079483167756 207.079483167756 13.085456211725202 0.0 0.0 0.0 0 0.75 0.0 0.4247425010840047 0.0 [HT]SSTS 3.7788 - 147 1 3.738 93106.4 1.0 216 2817 3034 SUDHL4_400M_050219_1,3035 SUDHL4_400M_050219_1,3035,PAGHTDAT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3036 13.223 800.0 92943.0 25 0 4493.7 + 35559 STQMTITTQK 10 111 577.789851652419 1153.565150371638 2 577.7895385622978 MULTI CID FTMS 0 0 0 3034 97479.6171875 0.116674470903419 -41 0.2778377532958984 2 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 96.93554129104106 0.0088365951652222 5 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 74.56 0.0 0.0 6.4635 6.4635 90.268 0.0 0.0 0.0 57.60972474047783 14.413193489898148 14.413193489898148 9.164539485499231 0 0.75 0.0 1.1549471895720984 1.4698565171985374 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}[YV]VP;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}[YV]VP;[HD][{I|L}P][C(Carbamidomethyl (C))R]TQK 6.4635;5.669;5.669;4.8777;4.4413;3.65;3.216;2.0533;1.1781 +;-;-;-;-;-;-;-;- + 489 + 1 3.738 59455.2 0.4399999976158142 217 2817 3034 SUDHL4_400M_050219_1,3036 SUDHL4_400M_050219_1,3036,STQMTITTQK True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3039 13.234 221.0 208800.0 25 0 23800.0 + -1 DTFHGSASGM 10 87 513.2033426051347 1024.392132277069 2 513.2033569216728 MULTI CID FTMS 0 0 0 3038 346501.9375 0.9853909148674288 8 -0.0486268997192382 1 Oxidation (M) _DTFHGSASGM(Oxidation (M))_ REV__ENSG00000127415|ENST00000514224|IDUA;REV__ENST00000506561.5_1_4:980866-994923:+|nuORF;REV__ENST00000508168.5_1_4:980866-994923:+|nuORF;REV__ENST00000514698.5_1_4:980866-997838:+|nuORF;REV__nc|ENSG00000127415|P35475-2|IDUA 26.88365393820708 0.3646707531412818 5 {[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}QT{[{M(Oxidation (M))|F}D]|MM} 9 -1 + 35.084 0.0 0.0 3.4249 3.4249 80.966 0.0 0.0 0.0 7.776968548455237 17.34128435619724 7.776968548455237 8.278324880759488 0 0.4247425010840047 0.0 0.6421590589602533 0.7302046884880937 {[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}QT{[{M(Oxidation (M))|F}D]|MM};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QT{[{M(Oxidation (M))|F}D]|MM};{[QS]|[NT]}{[WN]|[YH]}QT{[{M(Oxidation (M))|F}D]|MM};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}[AG]T{[{M(Oxidation (M))|F}D]|MM};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}TQ{[{M(Oxidation (M))|F}D]|MM};{[ES]|[DT]|[{I|L}C]}G{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]T{[{M(Oxidation (M))|F}D]|MM};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}TQ{[{M(Oxidation (M))|F}D]|MM};{[QS]|[NT]}{[WN]|[YH]}[AG]T{[{M(Oxidation (M))|F}D]|MM};{[QS]|[NT]}{[WN]|[YH]}TQ{[{M(Oxidation (M))|F}D]|MM} 3.4249;2.6167;2.5721;2.526;2.5178;2.4225;1.7179;1.7097;1.6679;1.665 -;-;-;-;-;-;-;-;-;- 274 1 3.738 39025.1 1.0 218 2819 3038 SUDHL4_400M_050219_1,3039 SUDHL4_400M_050219_1,3039,DTFHGSASGM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3046 13.272 800.0 93164.0 25 0 37944.0 -1 MIPVRGLWYCY 11 47 505.9070416199949 0 505.9070007205009 PEAK CID FTMS 0 0 0 3045 71767.2265625 0.0467835942508778 180 -1.5257673263549805 1 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))IPVRGLWYC(Carbamidomethyl (C))Y_ nc|nan|Q5T0J3|C1orf220 0.5059551277355931 0.4761840153648598 5 S 1 -1 1.2591 0.0 0.0 0.12468 0.0 0.0 774.7317487899915 145.01506982974846 919.74681861974 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.12468 - 1 + 1 3.738 66090.3 0.4000000059604645 219 2825 3045 SUDHL4_400M_050219_1,3046 SUDHL4_400M_050219_1,3046,MIPVRGLWYCY False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 3049 13.292 800.0 75645.0 25 0 7313.3 + 8204 EPSPSLIQSAN 11 96 571.788290672798 1141.562028412396 2 571.7886840701103 MULTI CID FTMS 0 0 0 3048 108022.1875 0.5587408413044501 -13 0.0872678756713867 1 Unmodified _EPSPSLIQSAN_ REV__ENSG00000156509|ENST00000428847|FBXO43;REV__ENST00000520987.1_1_8:101149771-101157363:-|nuORF 32.037481411007896 0.3399527776090619 5 {I|L}PSQSAN 7 -1 64.545 0.0 0.0 5.6541 0.0 0.0 426.21971327949376 0.0 426.21971327949376 0.0 53.74298247225546 0.0 0.0 0 1.424742501084005 0.0 1.424742501084005 0.0 {I|L}PSQSAN 5.6541 - 158 1 3.738 47539.4 0.449999988079071 220 2827 3048 SUDHL4_400M_050219_1,3049 SUDHL4_400M_050219_1,3049,EPSPSLIQSAN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3053 13.316 800.0 81700.0 25 0 11722.0 + 17626 KPTAAFHLL 9 93 499.2930770958483 996.5716012584966 2 499.2928954958916 MULTI CID FTMS 0 0 0 3052 46998.65234375 0.5410137698067888 1 -0.0163784027099609 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 5 KPT 3 -1 38.94 0.0 0.0 3.9074 0.0 0.0 0.0 667.3512056940061 667.3512056940061 25.639406530592264 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 KPT 3.9074 + + 44 + 1 3.738 54091.3 0.4199999868869781 221 2830 3052 SUDHL4_400M_050219_1,3053 SUDHL4_400M_050219_1,3053,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3063 13.365 800.0 172720.0 25 0 18574.0 + 28497 PTKGRADLTQ 10 94 543.798905276497 1085.5832576197938 2 543.7991210818291 MULTI CID FTMS 0 0 0 3062 200342.625 0.0537474714820736 65 -0.4521322250366211 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 34.93206674587334 0.2110832994570416 5 TPKV[YN]GTP 9 -1 82.713 0.0 0.0 7.6192 0.0 0.0 0.0 125.07229028873282 125.07229028873282 64.25296175278838 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.805462187404089 0.4247425010840047 TPKV[YN]GTP 7.6192 - 931 + 1 3.738 109252.1 0.6100000143051147 222 2839 3062 SUDHL4_400M_050219_1,3063 SUDHL4_400M_050219_1,3063,PTKGRADLTQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3064 13.379 800.0 17374.0 25 0 2192.8 -1 0 24 927.4072737203418 3705.599989014967 4 928.1575805544852 MULTI CID FTMS 0 0 0 3062 63389.75 0.7377126953979148 -9 0.0485391616821289 2 5 AT 2 -1 17.959 0.0 0.0 0.48464 0.0 0.0 2696.1887462330005 834.2977388971311 3530.486485130132 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 AT 0.48464 - 19 + 1 3.738 23382.2 0.3199999928474426 223 2839 3062 SUDHL4_400M_050219_1,3064 SUDHL4_400M_050219_1,3064, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3067 13.398 724.0 101950.0 25 0 6075.1 + 26620 NVSPRGTVS 9 104 458.7457377404275 915.476922547655 2 458.7462646365166 MULTI CID FTMS 0 0 0 3066 61107.28515625 0.2725299223489635 11 -0.0777578353881836 1 Unmodified _NVSPRGTVS_ REV__ENSG00000107854|ENST00000371627|TNKS2 32.78568957990786 0.1150597335874693 5 VGGPSKWSV 9 -1 + 93.609 0.0 0.0 10.225 10.225 88.626 0.0 0.0 0.0 84.5186289513248 12.98332479720628 12.98332479720628 2.218487496163561 0 1.6610892374447823 2.0 0.6643943297944485 0.0 VGGPSKWSV;VGGPS{[SA]|[TG]}RSV;VNPSKWSV;VNPS{[SA]|[TG]}RSV;VGGPSK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P;RGP[MN]RSV;VGGP{M(Oxidation (M))|F}[KT]NP;VGGP{M(Oxidation (M))|F}[KT]GGP;[VG]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}ASSV;RGPSAA[TA]SV 10.225;9.9829;8.1897;7.9414;6.6949;6.3376;6.0141;5.0083;4.8756;4.7241 -;-;-;-;-;-;-;-;-;- 493 + 1 3.738 62899.5 1.0 224 2841 3066 SUDHL4_400M_050219_1,3067 SUDHL4_400M_050219_1,3067,NVSPRGTVS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3072 13.423 613.0 125360.0 25 0 7706.0 + 39506 VASPPTHAA 9 116 425.7239661673707 849.4333794015414 2 425.7244445681572 MULTI CID FTMS 0 0 0 3071 81747.703125 0.8233927219921754 1 -0.0132579803466796 1 Unmodified _VASPPTHAA_ ENSG00000181555|ENST00000409792|SETD2;nc|ENSG00000181555|Q9BYW2-2|SETD2;nc|ENSG00000181555|Q9BYW2-3|SETD2 23.1484247019978 0.2366544122328345 5 {[VA]|[{I|L}G]}S 3 6 28.952 0.0 0.0 3.4084 0.0 0.0 0.0 589.2728013588257 589.2728013588257 14.215365405321734 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {[VA]|[{I|L}G]}S 3.4084 + + 160 1 3.738 62943.7 1.0 225 2845 3071 SUDHL4_400M_050219_1,3072 SUDHL4_400M_050219_1,3072,VASPPTHAA False True VASPPTHAA 13.423112 425.724444568157 515586.71875 3071.0 nc|ENSG00000181555|Q9BYW2-2|SETD2;;ENSG00000181555|ENST00000409792|SETD2;;nc|ENSG00000181555|Q9BYW2-3|SETD2 2.754382848739624 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3075 13.444 800.0 116110.0 25 0 8204.3 10456 FTHFEKEK 8 97 533.2700013524558 1064.5254497717117 2 533.2703735232353 MULTI CID FTMS 0 0 0 3074 115997.21875 0.52457280455824 -17 0.1272430419921875 1 Unmodified _FTHFEKEK_ ENSG00000121988|ENST00000264159|ZRANB3;ENST00000403017.2_1_2:135957914-136028945:-|nuORF;nc|ENSG00000121988|Q5FWF4-3|ZRANB3 36.12702656103203 0.299085846329477 5 [VS]AG{[CP]|[EA]}V[{M(Oxidation (M))|F}T]GK 11 9 + 58.399 0.0 0.0 5.4859 5.4859 80.773 0.0 0.0 0.0 1.5755249951361492 1.5755249951361492 1.5755249951361492 1.5755249951361492 0 1.960409376976188 2.0 0.2887254899964357 0.0 [VS]AG{[CP]|[EA]}V[{M(Oxidation (M))|F}T]GK;[VS]Q{[CP]|[EA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]AG[W{I|L}][{M(Oxidation (M))|F}T]GK;[VS]AG{[CP]|[EA]}VHQAP;[VS]Q[R{M(Oxidation (M))|F}][TA]EK;[VS]Q{[CP]|[EA]}V[{M(Oxidation (M))|F}T]GK;[VS]QHV{[CP]|[EA]}GAAP;[VS]A{[MS]|[{M(Oxidation (M))|F}A]}EQWK;[VS]AG{[MS]|[{M(Oxidation (M))|F}A]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EK;[VS]A[{M(Oxidation (M))|F}E]AQWK 5.4859;5.3379;5.1881;5.1356;5.0576;5.0451;4.9227;4.9207;4.8802;4.8389 -;-;-;-;-;-;-;-;-;- 1147 1 3.738 75892.8 0.4799999892711639 226 2847 3074 SUDHL4_400M_050219_1,3075 SUDHL4_400M_050219_1,3075,FTHFEKEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3080 13.461 65.0 556700.0 25 0 29209.0 + 35560 STQMTITTQK 10 67 577.789851652419 1153.565150371638 2 577.7898437380791 MULTI CID FTMS 0 0 0 3079 823850.0 0.9860755061121406 -7 0.0499305725097656 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 69.33821966488729 0.0189579340102328 5 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 77.835 0.0 0.0 6.7473 6.7473 91.086 0.0 0.0 0.0 63.85525292831007 14.681218414017836 14.681218414017836 9.164539485499247 0 0.6989700043360187 0.0 0.9247425010840048 1.045114016114533 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA 6.7473;5.9529;5.9529;5.1615;4.6183;3.827 +;-;-;-;-;- + 162 + 1 3.738 31521.4 1.0 227 2851 3079 SUDHL4_400M_050219_1,3080 SUDHL4_400M_050219_1,3080,STQMTITTQK True False STQMTITTQK 13.460533 577.789843738079 18945978.0 3079.0 ENSG00000181143|ENST00000397910|MUC16 11.188026746114096 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3093 13.517 546.0 155090.0 25 0 30982.0 -1 0 85 450.2362999297391 449.2290234631391 1 450.2360107302666 MULTI CID FTMS 0 0 0 3092 101116.15625 0.600569365796365 -22 0.1219444274902343 1 5 H 1 -1 11.594 0.0 0.0 2.5808 0.0 0.0 294.1595787383328 0.0 294.1595787383328 0.0 11.593793813122062 0.0 0.0 0 0.0 0.0 0.0 0.0 H 2.5808 - 4 + 1 3.738 70502.0 1.0 228 2863 3092 SUDHL4_400M_050219_1,3093 SUDHL4_400M_050219_1,3093, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3097 13.541 800.0 117970.0 25 0 15636.0 + 15698 IQRLETMK 8 97 509.7894652873935 1017.564377641587 2 509.7894470095634 MULTI CID FTMS 0 0 0 3096 97243.03125 0.1328693361881223 -21 0.1150989532470703 1 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 29.081581746732265 0.4323690340403521 5 NTMK 4 -1 47.871 0.0 0.0 4.7045 0.0 0.0 525.322844293734 0.0 525.322844293734 0.0 24.683479097250185 0.0 0.0 0 1.5 0.0 0.2887254899964357 0.3252574989159953 NTMK 4.7045 - 143 + 1 3.738 79088.9 0.4699999988079071 229 2866 3096 SUDHL4_400M_050219_1,3097 SUDHL4_400M_050219_1,3097,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3098 13.555 800.0 31262.0 25 0 1674.2 -1 0 66 678.2952571687912 2709.1519228087645 4 678.5456420779228 MULTI CID FTMS 0 0 0 3096 80050.1328125 0.9169509462842178 -10 0.0483512878417968 2 5 NC 2 -1 7.0783 0.0 0.0 0.26128 0.0 0.0 1726.737690486302 762.3366182916624 2489.074308777964 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NC 0.26128 - 61 + 1 3.738 29117.6 0.3700000047683716 230 2866 3096 SUDHL4_400M_050219_1,3098 SUDHL4_400M_050219_1,3098, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3101 13.576 800.0 153580.0 25 0 15788.0 + 17682 KPTGARPSAL 10 111 499.29325363456337 996.5719543359268 2 499.2933532595634 MULTI CID FTMS 0 0 0 3100 135175.46875 0.6055801774258648 -17 0.1034793853759765 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 40.23920728925047 0.1550410903091231 5 KPT 3 7 41.753 0.0 0.0 4.1896 0.0 0.0 0.0 667.3520771516758 667.3520771516758 20.97241881762777 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.7059771852360797 0.0 + KPT 4.1896 + + 297 + 1 3.738 96325.6 0.5600000023841858 231 2868 3100 SUDHL4_400M_050219_1,3101 SUDHL4_400M_050219_1,3101,KPTGARPSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3102 13.589 800.0 91365.0 25 0 3890.1 + -1 NEQSMRRQM 9 104 598.2707746446564 1194.5269963561127 2 598.2710449099541 MULTI CID FTMS 0 0 0 3100 129470.015625 0.5965499791468728 -16 0.0986909866333007 2 Oxidation (M) _NEQSM(Oxidation (M))RRQM_ REV__ENSG00000143669|ENST00000389793|LYST 36.12702656103203 0.0967173616627612 5 [AG]NQ[HV]EAQ 9 -1 51.792 0.0 0.0 4.3358 0.0 0.0 0.0 257.09027905722684 257.09027905722684 -3.610220819274005 0.0 -3.610220819274005 0.0 0 0.5796896906561032 2.0 0.0 1.666386562212267 [AG]NQ[HV]EAQ 4.3358 - 1546 1 3.738 59373.6 0.5 232 2868 3100 SUDHL4_400M_050219_1,3102 SUDHL4_400M_050219_1,3102,NEQSMRRQM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3113 13.642 800.0 51959.0 25 0 2758.1 + 3477 CGHNRPQSES 10 76 557.7362348604889 1113.4579167877778 2 557.7359496951103 MULTI CID FTMS 0 0 0 3112 64007.98828125 0.7744074494899729 1 -0.0163831710815429 1 Unmodified _CGHNRPQSES_ REV__ENST00000469937.2_1_7:46729000-46799342:-|nuORF 27.628801355627647 0.3479284626772844 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQE[{I|L}T]SES 10 -1 + 53.377 0.0 0.0 4.7938 4.7938 85.63 0.0 0.0 0.0 32.40803747765064 16.532125137753432 16.532125137753432 9.164539485499256 0 0.0 0.0 1.274227503252014 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQE[{I|L}T]SES;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[AG]E[{I|L}T]SES;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SQE[W{M(Oxidation (M))|F}]PS;[HD]YY[{I|L}T]SES;{[ES]|[DT]|[{I|L}C]}[YR]EQSES;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[AG]E[W{M(Oxidation (M))|F}]PS;{[DS]|[MA]|[CV]|TT}[W{M(Oxidation (M))|F}]EQSES;[QP][Y{M(Oxidation (M))|F}]EQSES;{[ES]|[DT]|[{I|L}C]}[YR]E[AG]SES;{[DS]|[MA]|[CV]|TT}[W{M(Oxidation (M))|F}]E[AG]SES 4.7938;3.9707;3.5989;3.4453;3.1011;2.7719;2.5386;2.5386;2.2741;1.7116 -;-;-;-;-;-;-;-;-;- 132 + 1 3.738 37603.8 0.4099999964237213 233 2878 3112 SUDHL4_400M_050219_1,3113 SUDHL4_400M_050219_1,3113,CGHNRPQSES False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3122 13.687 800.0 102610.0 25 0 19343.0 + 36989 TFLKKFYK 8 98 537.8207112444373 1073.6268695556746 2 537.8209716677666 MULTI CID FTMS 0 0 0 3121 86918.890625 0.6668037958656865 -15 0.0723514556884765 1 Unmodified _TFLKKFYK_ REV__ENSG00000184828|ENST00000590800|ZBTB7C 8.593279151180031 0.7721714526254883 5 TMK 3 -1 26.44 0.0 0.0 2.4627 0.0 0.0 695.4341643328215 0.0 695.4341643328215 0.0 10.51029995663981 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 TMK 2.4627 - 96 + 1 3.738 69636.2 0.4399999976158142 234 2886 3121 SUDHL4_400M_050219_1,3122 SUDHL4_400M_050219_1,3122,TFLKKFYK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3123 13.701 800.0 98256.0 25 0 8660.3 + 28498 PTKGRADLTQ 10 78 543.7986326859844 1085.5827124387688 2 543.7987548708916 MULTI CID FTMS 0 0 0 3121 97258.8671875 0.6541672455617055 -13 0.0642347335815429 2 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 22.65808497894818 0.4596126414678359 5 TPKV[YN]GTP 9 -1 76.705 0.0 0.0 7.0658 0.0 0.0 0.0 125.07218347720938 125.07218347720938 58.74606867853579 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.3807196863200844 0.4247425010840047 TPKV[YN]GTP 7.0658 - 535 + 1 3.738 65770.6 0.4399999976158142 235 2886 3121 SUDHL4_400M_050219_1,3123 SUDHL4_400M_050219_1,3123,PTKGRADLTQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3127 13.726 800.0 68345.0 25 0 3530.8 -1 STQMTITTQK 10 108 577.789851652419 1153.565150371638 2 577.7900268435478 MULTI CID FTMS 0 0 0 3126 82814.9765625 0.0991221944862927 31 -0.217015266418457 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 38.61474834105838 0.1721950110283317 5 [AG]TS{M(Oxidation (M))|F}T{I|L}TTQK 11 -1 [AG]TS + + 44.726 20.166 6.3788 3.8772 3.8772 55.905 0.0 0.0 0.0 0.0 20.25176194417388 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.6022338482433752 [AG]TS{M(Oxidation (M))|F}T{I|L}TTQK 3.8772 - 300 + 1 3.738 48533.6 0.4399999976158142 236 2889 3126 SUDHL4_400M_050219_1,3127 SUDHL4_400M_050219_1,3127,STQMTITTQK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3133 13.751 397.0 225960.0 25 0 114040.0 -1 0 66 490.283752320448 489.276475853848 1 490.2834045290947 MULTI CID FTMS 0 0 0 3132 140427.359375 0.7046362738576745 19 -0.1310577392578125 1 5 Y 1 -1 16.99 0.0 0.0 3.4724 0.0 0.0 308.20262133900263 0.0 308.20262133900263 0.0 8.91773141135175 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.4724 - 5 + 1 3.738 76442.3 1.0 237 2894 3132 SUDHL4_400M_050219_1,3133 SUDHL4_400M_050219_1,3133, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3141 13.792 800.0 98997.0 25 0 20257.0 42192 VSEFTITK 8 88 462.7541822928792 923.4938116525584 2 462.7542297244072 MULTI CID FTMS 0 0 0 3140 63946.6328125 0.7493002860739215 1 -0.0163774490356445 1 Unmodified _VSEFTITK_ ENSG00000170835|ENST00000372080|CEL;nc|ENSG00000170835|P19835-2|CEL 7.910154910731844 0.7763180056447161 5 CK 2 7 20.969 0.0 0.0 2.2706 0.0 0.0 0.0 689.3472406771288 689.3472406771288 11.878318069804426 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 CK 2.2706 - 12 + 1 3.738 66017.5 0.4099999964237213 238 2901 3140 SUDHL4_400M_050219_1,3141 SUDHL4_400M_050219_1,3141,VSEFTITK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3143 13.797 92.0 592330.0 25 0 95364.0 + 15699 IQRLETMK 8 59 509.7894652873935 1017.564377641587 2 509.7895080447197 MULTI CID FTMS 0 0 0 3142 533403.3125 0.7288228589893999 15 -0.0999984741210937 1 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 5 TMK 3 -1 43.94 0.0 0.0 4.3182 0.0 0.0 639.3714085171599 0.0 639.3714085171599 0.0 20.75257498915996 0.0 0.0 0 1.424742501084005 0.0 0.0 0.3494850021680094 TMK 4.3182 + + 66 + 1 3.738 49467.4 1.0 239 2902 3142 SUDHL4_400M_050219_1,3143 SUDHL4_400M_050219_1,3143,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3146 13.808 234.0 337900.0 25 0 91803.0 -1 GARMLWELAID 11 59 430.8882395088808 0 430.8881713747978 PEAK CID FTMS 0 0 0 3145 309433.40625 0.6953215936515498 -91 0.6163616180419922 1 Oxidation (M) _GARM(Oxidation (M))LWELAID_ ENSG00000168016|ENST00000645898|TRANK1;nc|ENSG00000168016|O15050|TRANK1 2.6312355333042263 0.4761840153648598 5 W 1 -1 2.4743 0.0 0.0 0.28778 0.0 0.0 465.5748666136616 205.0833529108032 670.6582195244648 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.28778 + + 2 + 1 3.738 68620.9 1.0 240 2904 3145 SUDHL4_400M_050219_1,3146 SUDHL4_400M_050219_1,3146,GARMLWELAID False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3147 13.821 773.0 90424.0 25 0 6114.2 + 34870 SQGFSHSQM 9 102 512.7113300054529 1023.4081070777056 2 512.7115966677666 MULTI CID FTMS 0 0 0 3145 89627.3671875 0.952543149139724 -4 0.0291328430175781 2 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 43.9818466556824 0.0535980856389242 5 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 49.032 0.0 0.0 4.791 4.791 81.538 0.0 0.0 0.0 3.995743144366948 3.995743144366948 3.995743144366948 3.995743144366948 0 1.5682503180159344 0.958607314841775 1.035666875892183 0.3494850021680094 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F};[PS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SQTN{M(Oxidation (M))|F};{[QS]|[NT]}G[HC][HV]C(Carbamidomethyl (C))P;[HS][YQ]QTN{M(Oxidation (M))|F} 4.791;4.4006;4.2092;3.8912;3.3042;2.6655;2.1517;1.5062;1.4485;1.3487 -;-;-;-;-;-;-;-;-;- 207 1 3.738 58423.6 1.0 241 2904 3145 SUDHL4_400M_050219_1,3147 SUDHL4_400M_050219_1,3147,SQGFSHSQM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3149 13.837 800.0 132570.0 25 0 12864.0 + 17627 KPTAAFHLL 9 106 499.29325363456337 996.5719543359268 2 499.2934142947197 MULTI CID FTMS 0 0 0 3148 138707.75 0.6214046426625948 20 -0.1656436920166015 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 5 KPT 3 -1 42.307 0.0 0.0 4.2453 0.0 0.0 0.0 667.3521452571704 667.3521452571704 16.910684610024017 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.7614393726401688 0.0 KPT 4.2453 + + 270 + 1 3.738 85975.4 0.4799999892711639 242 2905 3148 SUDHL4_400M_050219_1,3149 SUDHL4_400M_050219_1,3149,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3152 13.853 494.0 219770.0 25 0 11541.0 31041 RLHTGEKPY 9 141 367.53356277471255 1099.5788589243375 3 367.5330078005791 MULTI CID FTMS 0 0 0 3151 109614.484375 0.6678129540726029 -7 0.0699024200439453 1 Unmodified _RLHTGEKPY_ ENSG00000117010|ENST00000372699|ZNF684;ENSG00000142065|ENST00000270001|ZFP14;ENSG00000143067|ENST00000421812|ZNF697;ENSG00000152439|ENST00000282292|ZNF773;ENSG00000153896|ENST00000329285|ZNF599;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000166529|ENST00000292450|ZSCAN21;ENSG00000167232|ENST00000300619|ZNF91;ENSG00000167562|ENST00000391785|ZNF701;ENSG00000168661|ENST00000601142|ZNF30;ENSG00000178665|ENST00000429591|ZNF713;ENSG00000179909|ENST00000684351|ZNF154;ENSG00000180257|ENST00000444460|ZNF816;ENSG00000180257|ENST00000444460|ZNF816;ENSG00000182986|ENST00000682928|ZNF320;ENSG00000186300|ENST00000334241|ZNF555;ENSG00000187187|ENST00000347077|ZNF546;ENSG00000196345|ENST00000426540|ZKSCAN7;ENSG00000196417|ENST00000396408|ZNF765;ENSG00000196417|ENST00000396408|ZNF765;ENSG00000196670|ENST00000502412|ZFP62;ENSG00000197050|ENST00000337995|ZNF420;ENSG00000197050|ENST00000337995|ZNF420;ENSG00000197385|ENST00000360311|ZNF860;ENSG00000197385|ENST00000360311|ZNF860;ENSG00000197808|ENST00000588268|ZNF461;ENSG00000197808|ENST00000588268|ZNF461;ENSG00000198298|ENST00000361807|ZNF485;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198482|ENST00000359798|ZNF808;ENSG00000198538|ENST00000457749|ZNF28;ENSG00000198538|ENST00000457749|ZNF28;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000221994|ENST00000276054|ZNF630;ENSG00000250571|ENST00000340042|GLI4;ENSG00000258405|ENST00000421239|ZNF578;ENSG00000258405|ENST00000421239|ZNF578;ENSG00000278318|ENST00000614049|ZNF229;ENSG00000278318|ENST00000614049|ZNF229;ENSG00000278318|ENST00000614049|ZNF229;ENST00000270443.8_1_19:53472914-53473064:-|nuORF;ENST00000493756.1_1_1:40997452-41013129:+|nuORF;ENST00000523812.1_1_8:144357822-144358971:+|nuORF;ENST00000574529.1_1_17:52031395-52031542:+|nuORF;ENST00000601957.5_1_19:35433558-35435739:+|nuORF;nc|ENSG00000152439|Q6PK81-2|ZNF773;nc|ENSG00000167232|Q05481-2|ZNF91;nc|ENSG00000167562|Q9NV72|ZNF701;nc|ENSG00000168661|P17039-2|ZNF30;nc|ENSG00000186300|Q8NEP9-2|ZNF555;nc|ENSG00000186300|Q8NEP9-4|ZNF555;nc|ENSG00000197050|Q8TAQ5-2|ZNF420;nc|ENSG00000197808|Q8TAF7-2|ZNF461;nc|ENSG00000197808|Q8TAF7-2|ZNF461;nc|ENSG00000198298|Q8NCK3-2|ZNF485;nc|ENSG00000198482|Q8N4W9-2|ZNF808;nc|ENSG00000198538|P17035-2|ZNF28;nc|ENSG00000198538|P17035-2|ZNF28;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000221994|Q2M218-2|ZNF630;nc|ENSG00000278318|Q9UJW7-2|ZNF229;nc|ENSG00000278318|Q9UJW7-2|ZNF229;nc|ENSG00000278318|Q9UJW7-2|ZNF229;nc|ENSG00000278970|Q8NB50-3|ZFP62;nc|ENSG00000293317|Q9H963|ZNF702P 37.07464296494664 0.0915153923251136 5 [R{I|L}]H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RPY 8 4 + 38.867 0.0 0.0 3.5347 3.5347 76.593 0.0 0.0 0.0 2.795856829849363 13.928352599384866 2.795856829849363 2.795856829849363 0 0.805462187404089 1.2218487496163564 0.0 0.0 [R{I|L}]H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RPY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[KP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KPY;[R{I|L}]H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VG]PY;[{M(Oxidation (M))|F}V]{[NV]|[RG]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KPY 3.5347;3.2804;2.6924;1.7829 -;-;-;- 109 1 3.738 92968.8 1.0 243 2907 3151 SUDHL4_400M_050219_1,3152 SUDHL4_400M_050219_1,3152,RLHTGEKPY True True RIHTGEKPY 13.852658 367.533007800579 612945.375 3151.0 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4.114765167236328 3.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3159 13.88 246.0 310140.0 25 0 25026.0 + 31038 RLHEKIQEA 9 105 375.2124304699382 1122.6154620100149 3 375.2122985720634 MULTI CID FTMS 0 0 0 3158 189783.171875 0.5768327671127538 -8 0.0518302917480468 1 Unmodified _RLHEKIQEA_ ENSG00000148296|ENST00000372022|SURF6 9.38312468134398 0.5871240394367778 5 [R{I|L}]HEK 5 4 14.267 0.0 0.0 1.2708 0.0 0.0 0.0 456.21181145753343 456.21181145753343 0.2872415126189445 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 + [R{I|L}]HEK 1.2708 + + 51 1 3.738 62523.2 1.0 244 2913 3158 SUDHL4_400M_050219_1,3159 SUDHL4_400M_050219_1,3159,RLHEKIQEA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3164 13.906 655.0 141110.0 25 0 30938.0 -1 0 90 512.2370550619437 511.2297785953437 1 512.2374145388603 MULTI CID FTMS 0 0 0 3163 103022.703125 0.2972680003628467 -18 0.1244945526123046 1 5 {M(Oxidation (M))|F} 1 -1 15.485 0.0 0.0 3.0289 0.0 0.0 346.1836187826468 0.0 346.1836187826468 0.0 7.073259432077563 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 3.0289 - 7 + 1 3.738 75185.9 1.0 245 2917 3163 SUDHL4_400M_050219_1,3164 SUDHL4_400M_050219_1,3164, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3167 13.926 800.0 110880.0 25 0 37097.0 + 19595 LFYYLYFDKED 11 66 505.90699599519183 0 505.9068786501884 PEAK CID FTMS 0 0 0 3166 87263.1640625 0.703089868120037 2 -0.020421028137207 1 Unmodified _LFYYLYFDKED_ REV__ENSG00000089737|ENST00000621632|DDX24;REV__ENST00000555762.1_1_14:94524146-94547480:-|nuORF;REV__nc|ENSG00000089737|Q9GZR7-2|DDX24 0.5059551277355931 0.4761840153648598 5 G 1 -1 2.2185 0.0 0.0 0.2197 0.0 0.0 591.8112931605025 357.94443689517817 949.7557300556808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.2197 - 6 + 1 3.738 74570.8 0.4300000071525574 246 2919 3166 SUDHL4_400M_050219_1,3167 SUDHL4_400M_050219_1,3167,LFYYLYFDKED False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3170 13.947 800.0 105900.0 25 0 5623.6 11013 GASTKEGSSP 10 131 460.7197646159416 919.4249762986832 2 460.7198364138603 MULTI CID FTMS 0 0 0 3169 90591.2578125 0.0502414820407497 -18 0.1336431503295898 1 Unmodified _GASTKEGSSP_ ENST00000416802.1_1_2:27356078-27357162:-|nuORF;ENST00000468045.5_1_2:27356078-27356276:-|nuORF 22.736283301280096 0.4578556481593033 5 {[ET]|[MV]}{I|L}SNS 6 7 26.493 0.0 0.0 2.8815 0.0 0.0 0.0 285.1222276563961 285.1222276563961 8.534379787058182 0.0 0.0 0.0 0 0.0 0.0 1.2134679910804405 0.0 {[ET]|[MV]}{I|L}SNS 2.8815 - 605 1 3.877 72066.1 0.4199999868869781 247 2921 3169 SUDHL4_400M_050219_1,3170 SUDHL4_400M_050219_1,3170,GASTKEGSSP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3171 13.961 800.0 76989.0 25 0 11258.0 + 31039 RLHEKIQEA 9 94 562.3147959500305 1122.615038966861 2 562.3148071169853 MULTI CID FTMS 0 0 0 3169 96945.9453125 1.0 0 0.0 2 Unmodified _RLHEKIQEA_ ENSG00000148296|ENST00000372022|SURF6 33.4449034751529 0.1114409586740657 5 [R{I|L}]HEK{I|L}QEA 9 0 + 53.114 0.0 0.0 4.7313 4.7313 86.167 0.0 0.0 0.0 4.137342758552691 41.85513726472731 4.137342758552691 9.208187539523747 0 0.4247425010840047 0.0 0.3807196863200844 0.4247425010840047 + + [R{I|L}]HEK{I|L}QEA;[R{I|L}]HEK{I|L}[AG]EA 4.7313;3.911 +;- + 94 1 3.877 51788.5 0.4399999976158142 248 2921 3169 SUDHL4_400M_050219_1,3171 SUDHL4_400M_050219_1,3171,RLHEKIQEA True True RLHEKIQEA 13.960565 562.314807116985 247252.28125 3169.0 ENSG00000148296|ENST00000372022|SURF6 4.120027939478557 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3172 13.974 800.0 30626.0 25 0 1073.8 -1 0 61 783.3834986338704 2347.128666501811 3 783.3824340701103 MULTI CID FTMS 0 0 0 3169 77390.5390625 1.0 0 0.0 3 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K 3 -1 25.686 0.0 0.0 1.0944 0.0 0.0 0.0 1955.8948767891736 1955.8948767891736 15.954387282529794 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K 1.0944 - 88 1 3.877 26721.0 0.3600000143051147 249 2921 3169 SUDHL4_400M_050219_1,3172 SUDHL4_400M_050219_1,3172, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3180 14.015 800.0 72185.0 25 0 10437.0 5238 DKAFLWEKRYY 11 84 506.93020107327845 1517.7687738200354 3 506.9301635622978 MULTI CID FTMS 0 0 0 3179 78876.1015625 0.8829599419367494 1 -0.016357421875 1 Unmodified _DKAFLWEKRYY_ ENSG00000011405|ENST00000691414|PIK3C2A 2.2527281973983926 0.8645194170429107 5 {[QD]|[EN]|[WG]|[KD]|[RS]}A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}AADNK 14 10 {[QD]|[EN]|[WG]|[KD]|[RS]}A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK + + 40.716 22.357 2.5192 2.6826 2.6826 53.652 0.0 0.0 0.0 0.0 14.029010549428008 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.9124379954164592 {[QD]|[EN]|[WG]|[KD]|[RS]}A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}ADK{I|L}AADNK 2.6826 - 584 + 1 3.877 48995.9 0.4399999976158142 250 2928 3179 SUDHL4_400M_050219_1,3180 SUDHL4_400M_050219_1,3180,DKAFLWEKRYY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3183 14.033 673.0 177220.0 25 0 77303.0 -1 0 96 490.283752320448 489.276475853848 1 490.2838317751884 MULTI CID FTMS 0 0 0 3182 133908.828125 0.6719275937865848 55 -0.3963270187377929 1 5 Y 1 -1 15.485 0.0 0.0 3.1648 0.0 0.0 308.20248400990107 0.0 308.20248400990107 0.0 0.2121145582124093 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.1648 - 25 + 1 3.877 96426.5 1.0 251 2930 3182 SUDHL4_400M_050219_1,3183 SUDHL4_400M_050219_1,3183, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3184 14.04 391.0 160720.0 25 0 14639.0 + 12431 GTSPPSVEK 9 114 451.2350375254339 900.4555221176678 2 451.2348510622978 MULTI CID FTMS 0 0 0 3182 106661.75 0.0356279813017962 -46 0.3574161529541015 2 Unmodified _GTSPPSVEK_ ENSG00000181143|ENST00000397910|MUC16 27.22323531849824 0.1848086127304535 5 {[SA]|[TG]}SPPSVEK 9 0 + 54.835 0.0 0.0 6.0897 6.0897 94.175 0.0 0.0 0.0 41.18948444925195 11.101292910313354 11.101292910313354 54.83464698110283 0 0.3054621874040891 2.0 0.75 0.0 + + {[SA]|[TG]}SPPSVEK 6.0897 + + 164 + 1 3.877 55551.5 1.0 252 2930 3182 SUDHL4_400M_050219_1,3184 SUDHL4_400M_050219_1,3184,GTSPPSVEK False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3187 14.061 800.0 86804.0 25 0 4664.9 + -1 EKCGCDIFK 9 109 578.7598636864109 1155.5051744396217 2 578.7592040896416 MULTI CID FTMS 0 0 0 3186 105416.0546875 0.8006338374824129 -7 0.0577402114868164 1 2 Carbamidomethyl (C) _EKC(Carbamidomethyl (C))GC(Carbamidomethyl (C))DIFK_ REV__ENSG00000171811|ENST00000368586|CFAP46 24.020572477871973 0.2255576514309169 5 VDTHEEQSE 9 -1 60.64 0.0 0.0 5.2479 0.0 0.0 83.03757674384921 0.0 83.03757674384921 0.0 38.12137499549429 0.0 0.0 0 1.6677353201839438 0.0 0.3494850021680094 0.0 VDTHEEQSE 5.2479 - 707 1 3.877 57520.5 0.4099999964237213 253 2932 3186 SUDHL4_400M_050219_1,3187 SUDHL4_400M_050219_1,3187,EKCGCDIFK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3190 14.081 800.0 97063.0 25 0 12925.0 -1 SIVFLHMK 8 94 495.7739265144314 989.5333000956628 2 495.7742187380791 MULTI CID FTMS 0 0 0 3189 86172.453125 0.6743205715607972 -10 0.0822372436523437 1 Oxidation (M) _SIVFLHM(Oxidation (M))K_ ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656-2|DDOST;nc|ENSG00000244038|P39656-3|DDOST;nc|ENSG00000244038|P39656|DDOST 19.438996006549623 0.6237395211498085 5 TT{M(Oxidation (M))|F}K 4 -1 37.911 0.0 0.0 3.8312 0.0 0.0 494.3034854978097 0.0 494.3034854978097 0.0 25.39951721184713 0.0 0.0 0 1.0 0.0 0.2887254899964357 0.3252574989159953 TT{M(Oxidation (M))|F}K 3.8312 - 167 + 1 3.877 63452.7 0.4199999868869781 254 2934 3189 SUDHL4_400M_050219_1,3190 SUDHL4_400M_050219_1,3190,SIVFLHMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3194 14.106 800.0 113040.0 25 0 33293.0 -1 0 80 554.2842121228139 553.2769356562138 1 554.2838012576103 MULTI CID FTMS 0 0 0 3193 91819.6640625 0.2248489906345994 -56 0.4396619796752929 1 5 TESP 4 -1 11.625 0.0 0.0 2.1011 0.0 0.0 121.07382393922008 0.0 121.07382393922008 0.0 1.246310789342715 0.0 0.0 0 0.0 0.0 0.0 0.0 TESP 2.1011 - 27 + 1 3.877 71754.7 0.4900000095367431 255 2937 3193 SUDHL4_400M_050219_1,3194 SUDHL4_400M_050219_1,3194, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3202 14.136 216.0 261900.0 25 0 54492.0 25655 NFVSFCQPHRQ 11 75 454.88246752991546 1361.6255731899464 3 455.2165405154228 MULTI CID FTMS 0 0 0 3201 95482.703125 0.2295008683704785 -25 0.2197074890136718 1 Unmodified _NFVSFCQPHRQ_ ENST00000448183.6_1_6:11200558-11306280:-|nuORF 4.715918219556657 0.8528979259967293 5 R 1 10 12.474 0.0 0.0 0.91613 0.0 0.0 1187.5138311018588 0.0 1187.5138311018588 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.91613 + + 50 + 1 3.877 52837.1 1.0 256 2944 3201 SUDHL4_400M_050219_1,3202 SUDHL4_400M_050219_1,3202,NFVSFCQPHRQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3208 14.169 800.0 81592.0 25 0 15218.0 + 8606 EVDMTCPR 8 88 475.70724998530375 949.3999470374076 2 475.7072326540947 MULTI CID FTMS 0 0 0 3207 65102.05078125 0.2468630146579777 -26 0.1736927032470703 1 Unmodified _EVDMTCPR_ REV__ENST00000470907.6_1_2:74760550-74760706:-|nuORF 8.593279151180031 0.7721714526254883 5 GG 2 -1 9.464 0.0 0.0 0.99683 0.0 0.0 764.2836578301794 68.05124841861561 832.334906248795 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GG 0.99683 - 48 + 1 3.877 57228.5 0.4199999868869781 257 2949 3207 SUDHL4_400M_050219_1,3208 SUDHL4_400M_050219_1,3208,EVDMTCPR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3214 14.19 40.0 800370.0 25 0 58784.0 10995 GASDTLTGQA 10 70 460.7197646159416 919.4249762986832 2 460.7196533083916 MULTI CID FTMS 0 0 0 3213 1287972.125 0.7143032335537896 15 -0.0819911956787109 1 Unmodified _GASDTLTGQA_ ENST00000468892.5_1_3:183910449-183911483:+|nuORF 15.847184025352805 0.5816416552707754 5 SNS{I|L}[DP] 6 8 24.759 0.0 0.0 2.6929 0.0 0.0 288.1446934439902 0.0 288.1446934439902 0.0 7.848017428648056 0.0 0.0 0 0.0 0.0 0.7134679910804405 0.0 SNS{I|L}[DP] 2.6929 - 104 + 1 3.877 29772.7 1.0 258 2954 3213 SUDHL4_400M_050219_1,3214 SUDHL4_400M_050219_1,3214,GASDTLTGQA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3215 14.203 775.0 157250.0 25 0 28105.0 28316 PRRPPPPPP 9 104 505.79870937696006 1009.58286582072 2 505.7983886599541 MULTI CID FTMS 0 0 0 3213 95576.25 0.1343292825133969 -39 0.300821304321289 2 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 48.345845343767074 0.0439967357579942 5 RPR{[HG]|PP}PPPP 9 2 + 42.285 0.0 0.0 4.1884 4.1884 76.241 0.0 0.0 0.0 24.32644044417621 2.117581349478641 2.117581349478641 1.2371250542002343 0 2.216190326687972 0.0 0.0 0.0 RPR{[HG]|PP}PPPP;PRR{[HG]|PP}PPPP;RPR{[HG]|PP}PKY;[RP]R[YK]PPP;RPR[YK]PPP;PRR{[HG]|PP}PKY;PRR[YK]PPP;RPR[YK]KY;PRR[YK]KY 4.1884;4.0658;3.6056;3.5499;3.5467;3.4831;3.4242;2.9707;2.8482 -;+;-;-;-;-;-;-;- + 154 + 1 3.877 97844.9 1.0 259 2954 3213 SUDHL4_400M_050219_1,3215 SUDHL4_400M_050219_1,3215,PRRPPPPPP True True RRPPPPPPP 14.203326 505.798388659954 24115092.0 3213.0 nc|ENSG00000117560|P48023-2|FASLG;;ENST00000360947.7_1_14:21561312-21566652:-|nuORF;;ENSG00000099381|ENST00000262519|SETD1A;;ENSG00000117560|ENST00000367721|FASLG 1.6555124918619792 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3218 14.212 122.0 493790.0 25 0 72243.0 + -1 IQRLETMK 8 76 517.7865886450584 1033.5586243569169 2 517.7869750857353 MULTI CID FTMS 0 0 0 3217 382527.25 0.0019769404285523 -36 0.2810859680175781 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 5 KTT[{I|L}P][WP]K 8 -1 45.851 0.0 0.0 4.4363 0.0 0.0 63.99843913487434 0.0 63.99843913487434 0.0 34.882287586051106 0.0 0.0 0 1.424742501084005 0.0 1.3494850021680094 0.3494850021680094 KTT[{I|L}P][WP]K 4.4363 - 146 + 1 3.877 51075.3 1.0 260 2956 3217 SUDHL4_400M_050219_1,3218 SUDHL4_400M_050219_1,3218,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3227 14.251 393.0 209270.0 25 0 73764.0 -1 0 76 512.2370550619437 511.2297785953437 1 512.2372314333916 MULTI CID FTMS 0 0 0 3226 193744.828125 0.5590431612678788 29 -0.2566795349121094 1 5 P 1 -1 11.99 0.0 0.0 2.3453 0.0 0.0 396.16613221038114 0.0 396.16613221038114 0.0 2.6979531151190628 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.3453 - 6 + 1 3.877 66474.0 1.0 261 2964 3226 SUDHL4_400M_050219_1,3227 SUDHL4_400M_050219_1,3227, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3237 14.288 20.0 2262600.0 25 0 170850.0 + + 37102 GTSPPSVEK 9 72 451.2350375254339 900.4555221176678 2 451.2349120974541 MULTI CID FTMS 0 0 0 3236 2778711.0 0.9281665034662892 -3 0.0121927261352539 1 Unmodified _TGSPVPSASV_ ENSG00000181143|ENST00000397910|MUC16 36.12702656103203 0.1984647928738587 5 {[SA]|[TG]}SPPSVEK 9 -1 + 66.8 0.0 0.0 7.4185 7.4185 96.982 0.0 0.0 0.0 42.27596700430301 13.879155269035408 13.879155269035408 44.000835780548094 0 0.2887254899964357 2.0 0.8494850021680094 0.1595680409956017 {[SA]|[TG]}SPPSVEK;[PS]PVE[KS]{[SA]|[TG]} 7.4185;2.532 -;- 134 + 1 3.877 40811.4 1.0 262 2973 3236 SUDHL4_400M_050219_1,3237 SUDHL4_400M_050219_1,3237,TGSPVPSASV False False GTSPPSVEK 14.287661 451.234912097454 64991608.0 3236.0 ENSG00000181143|ENST00000397910|MUC16 8.153326988220215 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3242 14.316 800.0 54819.0 25 0 7935.0 -1 0 26 1181.152963762927 3540.43706188898 3 1181.489672839642 MULTI CID FTMS 0 0 0 3241 39042.84765625 0.469726359461385 -1 0.0040521621704101 1 5 G 1 -1 3.9794 0.0 0.0 0.1124 0.0 0.0 1093.36725694523 2387.013955171121 3480.381212116351 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.1124 - 2 + 1 3.877 38330.9 0.3100000023841858 263 2977 3241 SUDHL4_400M_050219_1,3242 SUDHL4_400M_050219_1,3242, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3245 14.337 800.0 84546.0 25 0 5562.9 -1 0 67 753.9918508264946 2258.953723079684 3 753.9925414919853 MULTI CID FTMS 0 0 0 3244 51396.76171875 0.1321500871387398 -14 0.069681167602539 1 5 VS{[SA]|[TG]}QGSH[HD] 10 -1 41.63 0.0 0.0 1.8429 0.0 0.0 1235.5265055580649 0.0 1235.5265055580649 0.0 33.838031200885155 0.0 0.0 0 0.5 0.0 1.25 0.5 VS{[SA]|[TG]}QGSH[HD] 1.8429 - 479 + 1 3.877 57169.8 0.4900000095367431 264 2979 3244 SUDHL4_400M_050219_1,3245 SUDHL4_400M_050219_1,3245, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3248 14.351 428.0 137170.0 25 0 10000.0 + 44953 YPQFEQSE 8 87 514.2209448335301 1026.42733673386 2 514.2207519412041 MULTI CID FTMS 0 0 0 3247 152704.390625 0.0703391477577104 -9 0.0615425109863281 1 Unmodified _YPQFEQSE_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3 20.453626601364224 0.6087503291685402 5 VQ[YG]SE 6 5 36.119 0.0 0.0 3.5189 0.0 0.0 345.11766721507 0.0 345.11766721507 0.0 19.15205560610346 0.0 0.0 0 0.5 0.0 0.6989700043360187 0.5 VQ[YG]SE 3.5189 - 379 + 1 3.844 51209.3 1.0 265 2981 3247 SUDHL4_400M_050219_1,3248 SUDHL4_400M_050219_1,3248,YPQFEQSE False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3252 14.374 800.0 62868.0 25 0 10335.0 24378 MFLNNPRK 8 91 510.2750879187312 1018.5356229042624 2 510.2753784060478 MULTI CID FTMS 0 0 0 3251 109993.953125 0.1054729032706967 -16 0.0953454971313476 1 Unmodified _MFLNNPRK_ ENST00000361781.6_1_10:52104080-52193261:-|nuORF 5.230669730166228 0.792582437072536 5 K 1 7 14.277 0.0 0.0 1.4018 0.0 0.0 872.4296486384407 0.0 872.4296486384407 0.0 3.308265975937834 0.0 0.0 0 0.0 0.0 0.0 0.1803115997617927 + K 1.4018 + + 39 + 1 3.844 43962.2 0.7799999713897705 266 2984 3251 SUDHL4_400M_050219_1,3252 SUDHL4_400M_050219_1,3252,MFLNNPRK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3253 14.388 800.0 122680.0 25 0 13144.0 + 31821 RTAPSGSEY 9 119 484.2279902499048 966.4414275666096 2 484.2280761599541 MULTI CID FTMS 0 0 0 3251 132292.5625 0.6556770262160875 -10 0.070404052734375 2 Unmodified _RTAPSGSEY_ ENSG00000171566|ENST00000499023|PLRG1;nc|ENSG00000171566|O43660-2|PLRG1 15.248480904072842 0.4239247793462406 5 GSEY 4 5 35.433 0.0 0.0 3.6663 0.0 0.0 512.2710438459 0.0 512.2710438459 0.0 24.32380653375944 0.0 0.0 0 0.5 0.0 0.5 0.0 + GSEY 3.6663 + + 95 1 3.844 79133.6 0.7200000286102295 267 2984 3251 SUDHL4_400M_050219_1,3253 SUDHL4_400M_050219_1,3253,RTAPSGSEY False True RTAPSGSEY 14.388242 484.228076159954 1232716.75 3251.0 ENSG00000171566|ENST00000499023|PLRG1;;nc|ENSG00000171566|O43660-2|PLRG1 7.200489521026611 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3254 14.402 800.0 126160.0 25 0 15961.0 + -1 GVDEMLMER 9 122 548.2427508502145 1094.470948767229 2 548.2442504763603 MULTI CID FTMS 0 0 0 3251 100810.4296875 0.1895672495107642 -13 0.0833244323730468 3 Oxidation (M) _GVDEM(Oxidation (M))LMER_ REV__ENSG00000069275|ENST00000367142|NUCKS1;REV__nc|ENSG00000069275|Q9H1E3-2|NUCKS1 4.3292370932331545 0.7635526921153418 5 K 1 -1 11.906 0.0 0.0 1.0878 0.0 0.0 948.365218642032 0.0 948.365218642032 0.0 3.814827024862384 0.0 0.0 0 0.0 0.0 0.0 0.1421590589602531 K 1.0878 - 65 + 1 3.844 80116.7 0.6600000262260437 268 2984 3251 SUDHL4_400M_050219_1,3254 SUDHL4_400M_050219_1,3254,GVDEMLMER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3255 14.416 800.0 98222.0 25 0 21075.0 22299 LPSCPPQQIY 10 71 573.2868988738552 1144.5592448145103 2 573.2879516482353 MULTI CID FTMS 0 0 0 3251 85835.2265625 0.7666119351309894 -1 0.0039005279541015 4 Unmodified _LPSCPPQQIY_ ENSG00000174038|ENST00000312292|C9orf131;nc|ENSG00000174038|Q5VYM1-2|SPATA31G1;nc|ENSG00000174038|Q5VYM1-3|SPATA31G1 5.296884461304476 0.7021353017287152 5 D 1 10 2.2185 0.0 0.0 0.19383 0.0 0.0 571.3470388592353 455.1551302545532 1026.5021691137886 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.19383 - 6 + 1 3.844 64431.9 0.6200000047683716 269 2984 3251 SUDHL4_400M_050219_1,3255 SUDHL4_400M_050219_1,3255,LPSCPPQQIY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3257 14.429 643.0 110880.0 25 0 19384.0 + 8607 EVDMTCPR 8 88 475.70724998530375 949.3999470374076 2 475.7072326540947 MULTI CID FTMS 0 0 0 3256 67282.15625 0.255129841921167 10 -0.0973119735717773 1 Unmodified _EVDMTCPR_ REV__ENST00000470907.6_1_2:74760550-74760706:-|nuORF 8.593279151180031 0.7721714526254883 5 {I|L}{M(Oxidation (M))|F}E 3 -1 14.094 0.0 0.0 1.4846 0.0 0.0 542.2203643731482 0.0 542.2203643731482 0.0 4.63048822405913 0.0 0.0 0 0.0 0.0 0.1421590589602531 0.0 {I|L}{M(Oxidation (M))|F}E 1.4846 - 48 + 1 3.844 60236.6 1.0 270 2985 3256 SUDHL4_400M_050219_1,3257 SUDHL4_400M_050219_1,3257,EVDMTCPR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3259 14.447 800.0 199200.0 25 0 43590.0 + -1 EPYFLRMT 8 103 536.7608288026787 0 536.7619506716728 PEAK CID FTMS 0 0 0 3258 153618.96875 0.4738758454379176 -4 0.0782356262207031 1 Oxidation (M) _EPYFLRM(Oxidation (M))T_ REV__ENSG00000110080|ENST00000444328|ST3GAL4;REV__nc|ENSG00000110080|Q11206-2|ST3GAL4;REV__nc|ENSG00000110080|Q11206-3|ST3GAL4;REV__nc|ENSG00000110080|Q11206-4|ST3GAL4;REV__nc|ENSG00000110080|Q11206-5|ST3GAL4;REV__nc|ENSG00000110080|Q11206-6|ST3GAL4;REV__nc|ENSG00000110080|Q11206-7|ST3GAL4 8.593279151180031 0.5573742999696857 5 H 1 -1 5.4846 0.0 0.0 0.51185 0.0 0.0 132.07699015009888 799.3694552057249 931.4464453558236 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.51185 - 6 + 1 3.788 124025.8 0.6600000262260437 271 2986 3258 SUDHL4_400M_050219_1,3259 SUDHL4_400M_050219_1,3259,EPYFLRMT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3261 14.452 135.0 545820.0 25 0 151180.0 + 28317 PRRPPPPPP 9 88 505.79870937696006 1009.58286582072 2 505.7988159060478 MULTI CID FTMS 0 0 0 3260 488256.1875 0.6862280467124585 -6 0.1064710617065429 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 57.47134341890925 0.0274820932774257 5 PR[YK]PPP 7 4 47.567 0.0 0.0 4.7116 0.0 0.0 156.10203749824376 0.0 156.10203749824376 0.0 27.73419257499505 0.0 0.0 0 1.774227503252014 0.0 0.0 0.805462187404089 PR[YK]PPP 4.7116 - 128 1 3.788 60943.9 1.0 272 2987 3260 SUDHL4_400M_050219_1,3261 SUDHL4_400M_050219_1,3261,PRRPPPPPP True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3262 14.466 800.0 107550.0 25 0 14822.0 + 10996 GASDTLTGQA 10 119 460.7197646159416 919.4249762986832 2 460.7202331423759 MULTI CID FTMS 0 0 0 3260 130005.6640625 0.0721005248620201 48 -0.4767045974731445 2 Unmodified _GASDTLTGQA_ ENST00000468892.5_1_3:183910449-183911483:+|nuORF 15.847184025352805 0.5816416552707754 5 [C(Carbamidomethyl (C))K]S{[ET]|[MV]}GPAA 9 7 + 16.55 0.0 0.0 1.8 1.8 82.049 0.0 0.0 0.0 1.9826865455177387 1.4877923065985217 1.4877923065985217 11.426675035687316 0 0.0 0.0 0.5 0.0 [C(Carbamidomethyl (C))K]S{[ET]|[MV]}GPAA;[C(Carbamidomethyl (C))K]S{[ET]|[MV]}[QP]A;[C(Carbamidomethyl (C))K][CS][{I|L}A]PAA 1.8;0.55723;0.1493 -;-;- 401 + 1 3.788 71209.7 0.6100000143051147 273 2987 3260 SUDHL4_400M_050219_1,3262 SUDHL4_400M_050219_1,3262,GASDTLTGQA False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3264 14.47 0.43 143530000.0 25 0 25975000.0 + -1 IQRLETMK 8 69 517.7865886450584 1033.5586243569169 2 517.7872192263603 MULTI CID FTMS 0 0 0 3263 158935680.0 0.8213960478147977 -4 0.1071739196777343 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 5 KTT[{I|L}P][WP]K 8 -1 48.677 0.0 0.0 4.7097 0.0 0.0 63.99468968904439 0.0 63.99468968904439 0.0 30.568109453757653 0.0 0.0 0 1.305462187404089 0.0 1.3494850021680094 0.2742275032520141 KTT[{I|L}P][WP]K 4.7097 - 129 + 1 3.788 51801.9 1.0 274 2988 3263 SUDHL4_400M_050219_1,3264 SUDHL4_400M_050219_1,3264,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3265 14.484 800.0 126710.0 25 0 5019.4 + 12272 GREQSDQGPN 10 137 544.2428101214175 0 544.2423583865166 PEAK CID FTMS 0 0 0 3263 112082.15625 0.4874193524275981 -5 0.1110744476318359 2 Unmodified _GREQSDQGPN_ REV__ENSG00000163359|ENST00000295550|COL6A3;REV__nc|ENSG00000163359|P12111-2|COL6A3;REV__nc|ENSG00000163359|P12111-4|COL6A3 12.240655878213236 0.3578162629684178 5 W 1 -1 5.4846 0.0 0.0 0.5048 0.0 0.0 195.06564223575123 702.2815465685434 897.3471888042945 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.5048 - 59 + 1 3.788 81068.1 0.6700000166893005 275 2988 3263 SUDHL4_400M_050219_1,3265 SUDHL4_400M_050219_1,3265,GREQSDQGPN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3271 14.51 396.0 206080.0 25 0 30057.0 + -1 LLLCRFGS 8 111 483.2646057009697 0 483.2646057009697 PEAK CID FTMS 0 0 0 -1 0 1 Carbamidomethyl (C) _LLLC(Carbamidomethyl (C))RFGS_ REV__ENST00000467302.5_1_1:109234995-109235238:+|nuORF 8.593279151180031 0.5573742999696857 5 TSS 3 -1 11.655 0.0 0.0 1.2084 0.0 0.0 207.1375355212769 479.2312410943969 686.3687766156738 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 TSS 1.2084 - 75 + 1 3.788 70739.7 1.0 276 2993 3270 SUDHL4_400M_050219_1,3271 SUDHL4_400M_050219_1,3271,LLLCRFGS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3274 14.524 363.0 180350.0 25 0 54727.0 29508 QLLEMRLT 8 81 502.2834271282644 0 502.2850219607353 PEAK CID FTMS 0 0 0 3273 382919.15625 1.0 0 0.0 1 Unmodified _QLLEMRLT_ ENSG00000197892|ENST00000524189|KIF13B 2.302733041254933 0.5920993303473642 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.682 56403.4 1.0 277 2995 3273 SUDHL4_400M_050219_1,3274 SUDHL4_400M_050219_1,3274,QLLEMRLT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3275 14.532 411.0 184970.0 25 0 24029.0 28300 PRRFSPRA 8 90 493.7849891659805 0 493.7847473025322 PEAK CID FTMS 0 0 0 3273 235960.0625 1.0 0 0.0 2 Unmodified _PRRFSPRA_ ENST00000564546.5_1_16:30076568-30077015:+|nuORF 7.910154910731844 0.5650536163073903 5 T{M(Oxidation (M))|F} 2 7 13.271 0.0 0.0 1.3466 0.0 0.0 245.13661543957969 489.2729891412719 734.4096045808516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T{M(Oxidation (M))|F} 1.3466 - 26 + 1 3.682 63844.2 1.0 278 2995 3273 SUDHL4_400M_050219_1,3275 SUDHL4_400M_050219_1,3275,PRRFSPRA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3276 14.539 392.0 205860.0 25 0 32263.0 + 7636 EKDLAHMK 8 88 486.2520932713962 0 485.7826415896416 PEAK CID FTMS 0 0 0 3273 55664.23046875 0.3131736344549912 -5 0.0257377624511718 3 Unmodified _EKDLAHMK_ REV__ENSG00000181215|ENST00000531445|C4orf50 12.531546534597751 0.5131024102181418 5 TTG 3 -1 15.005 0.0 0.0 1.5461 0.0 0.0 640.2979049492394 68.05142389468983 708.3493288439292 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 TTG 1.5461 - 38 + 1 3.682 66811.5 1.0 279 2995 3273 SUDHL4_400M_050219_1,3276 SUDHL4_400M_050219_1,3276,EKDLAHMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3278 14.554 768.0 68223.0 25 0 14340.0 + 32381 RYRGDPFR 8 72 533.7798950076103 0 533.7798950076103 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _RYRGDPFR_ REV__ENSG00000143125|ENST00000271331|PROK1 4.75600775471527 0.5825752635465162 5 E 1 -1 6.9897 0.0 0.0 0.65597 0.0 0.0 163.0856556384643 770.3814180963499 933.4670737348142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.65597 - 9 + 1 3.682 45674.9 1.0 280 2996 3277 SUDHL4_400M_050219_1,3278 SUDHL4_400M_050219_1,3278,RYRGDPFR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3279 14.568 800.0 61860.0 25 0 3797.4 + 39945 VGACLRSRK 9 89 495.2876546207477 0 495.2700683474541 PEAK CID FTMS 0 0 0 3277 54266.93359375 0.2326167853108688 2 -0.0712566375732421 2 Unmodified _VGACLRSRK_ REV__ENST00000542077.5_1_1:212251539-212253984:+|nuORF 4.75600775471527 0.3444685223463735 5 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.31348 0.0 0.0 493.3303008413016 345.17331873111567 838.5036195724173 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.31348 - 2 + 1 3.682 41915.3 0.8600000143051147 281 2996 3277 SUDHL4_400M_050219_1,3279 SUDHL4_400M_050219_1,3279,VGACLRSRK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3281 14.582 750.0 156890.0 25 0 6697.0 + 34555 SPETLKVK 8 144 451.26931620466354 0 451.7374755740166 PEAK CID FTMS 0 0 0 3280 36956.3671875 0.9900988337533384 -1 0.0289602279663085 1 Unmodified _SPETLKVK_ REV__ENSG00000198826|ENST00000361627|ARHGAP11A;REV__nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A 16.942295170755138 0.4635191396245973 5 SPP 3 -1 15.802 0.0 0.0 1.7548 0.0 0.0 158.13788189861515 458.22700295332055 616.3648848519357 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 SPP 1.7548 - 143 + 1 3.682 96051.4 1.0 282 2997 3280 SUDHL4_400M_050219_1,3281 SUDHL4_400M_050219_1,3281,SPETLKVK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3282 14.596 786.0 257610.0 25 0 20688.0 + 2584 ASKTRPQL 8 146 450.7670145391376 0 450.7676879763603 PEAK CID FTMS 0 0 0 3280 244573.296875 1.0 0 0.0 2 Unmodified _ASKTRPQL_ REV__ENST00000368842.9_1_10:126302354-126302678:+|nuORF 13.50788311687929 0.5021269579892848 5 SPP 3 -1 15.049 0.0 0.0 1.673 0.0 0.0 157.12996209481133 458.2270601861938 615.3570222810051 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SPP 1.673 - 180 + 1 3.682 160768.2 1.0 283 2997 3280 SUDHL4_400M_050219_1,3282 SUDHL4_400M_050219_1,3282,ASKTRPQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3283 14.61 800.0 213130.0 25 0 58579.0 28956 QDEVQQHEK 9 104 570.7680473624721 0 570.7686035037041 PEAK CID FTMS 0 0 0 3280 169794.109375 0.8730120716551573 -1 0.0289602279663085 3 Unmodified _QDEVQQHEK_ ENSG00000164221|ENST00000379611|CCDC112;nc|ENSG00000164221|Q8NEF3|CCDC112 14.838274106304384 0.2567717476666951 5 HVDAAE 6 7 27.868 0.0 0.0 2.4456 0.0 0.0 371.1423998520015 143.0832918756469 514.2256917276484 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 HVDAAE 2.4456 - 416 + 1 3.682 131526.6 0.8999999761581421 284 2997 3280 SUDHL4_400M_050219_1,3283 SUDHL4_400M_050219_1,3283,QDEVQQHEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3285 14.615 95.0 372500.0 25 0 37057.0 + 44954 YPQFEQSE 8 58 514.2209448335301 1026.42733673386 2 514.2209350466728 MULTI CID FTMS 0 0 0 3284 531919.125 0.2450141595496581 8 -0.1742792129516601 1 Unmodified _YPQFEQSE_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3 20.453626601364224 0.6087503291685402 5 {[ES]|[DT]|[{I|L}C]}[YR]EQSE 8 4 {[ES]|[DT]|[{I|L}C]}[YR]EQ + + 32.831 8.1471 1.0282 3.1986 3.1986 54.505 0.0 0.0 0.0 0.0 19.01863755803668 0.0 0.0 0 0.5 0.0 0.6861818737241735 0.0 {[ES]|[DT]|[{I|L}C]}[YR]EQSE 3.1986 - 88 + 1 3.594 34965.3 1.0 285 2998 3284 SUDHL4_400M_050219_1,3285 SUDHL4_400M_050219_1,3285,YPQFEQSE False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3286 14.627 675.0 228850.0 25 0 14562.0 + 13716 HQQPPSQQY 9 119 556.7598440648626 1111.505135196525 2 556.7602416872978 MULTI CID FTMS 0 0 0 3284 296868.875 0.4195290843434256 -6 0.1150178909301757 2 Unmodified _HQQPPSQQY_ ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18 110.6747026088012 0.0053351249510064 5 [AG]HQPPSQQY 10 3 + 94.835 0.0 0.0 8.5321 8.5321 88.112 0.0 0.0 0.0 14.247425010840049 16.53212513775344 14.247425010840049 2.525749891599532 0 1.6861818737241734 2.0 0.9247425010840048 0.9674165578762486 [AG]HQPPSQQY;[AG]QHPPSQQY;[AG]HQPPSQ[AG]Y;[AG]HQPPS[AG]QY;[AG]QHPPSQ[AG]Y;[AG]QHPPS[AG]QY;[HQ]QPPSQQY;[AG]H[AG]PPSQQY;[AG]HQPPS[AG][AG]Y;[AG]SPPQHQQY 8.5321;8.3049;7.7076;7.7076;7.4803;7.4803;7.2503;7.1797;6.8863;6.7887 -;-;-;-;-;-;+;-;-;- + 2895 1 3.594 118121.6 1.0 286 2998 3284 SUDHL4_400M_050219_1,3286 SUDHL4_400M_050219_1,3286,HQQPPSQQY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3288 14.631 80.0 158730.0 25 0 18076.0 + 18429 KWRGWVST 8 42 510.2750879187312 1018.5356229042624 2 510.2758972048759 MULTI CID FTMS 0 0 0 3287 930844.0 0.8925837864972039 -1 0.0170249938964843 1 Unmodified _KWRGWVST_ REV__ENST00000308588.9_1_15:75913382-75918042:-|nuORF 0.6903765706972694 0.8201419426409876 5 V 1 -1 10.089 0.0 0.0 0.9905 0.0 0.0 901.4562523371712 0.0 901.4562523371712 0.0 10.088643834802156 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.9905 + + 2 + 1 3.594 18116.3 1.0 287 2999 3287 SUDHL4_400M_050219_1,3288 SUDHL4_400M_050219_1,3288,KWRGWVST False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3289 14.645 800.0 272760.0 25 0 99609.0 16312 IYCFLTKKF 9 176 388.2147282260152 0 388.2148620486259 PEAK CID FTMS 0 0 0 3287 112811.1484375 0.31850500517643 -5 0.1171464920043945 2 Unmodified _IYCFLTKKF_ ENSG00000169403|ENST00000373857|PTAFR 15.847184025352805 0.2451986057151378 5 Y 1 8 6.9897 0.0 0.0 0.90258 0.0 0.0 135.11322002449293 473.2181185358032 608.3313385602961 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.90258 + + 22 + 1 3.594 173214.5 0.6499999761581421 288 2999 3287 SUDHL4_400M_050219_1,3289 SUDHL4_400M_050219_1,3289,IYCFLTKKF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3290 14.659 800.0 253230.0 25 0 36814.0 + 40136 VGLRSHVDSS 10 101 528.7768501004672 0 528.7771484255791 PEAK CID FTMS 0 0 0 3287 76251.5234375 0.4597435661916235 -2 0.0593214035034179 3 Unmodified _VGLRSHVDSS_ REV__ENSG00000074356|ENST00000389005|NCBP3;REV__nc|ENSG00000074356|Q53F19-2|NCBP3 5.731851221503515 0.3961065659209837 5 KE 2 -1 11.281 0.0 0.0 1.0688 0.0 0.0 63.99363682318762 731.3761080377561 795.3697448609438 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 KE 1.0688 - 50 + 1 3.594 157218.9 0.6600000262260437 289 2999 3287 SUDHL4_400M_050219_1,3290 SUDHL4_400M_050219_1,3290,VGLRSHVDSS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3292 14.663 116.0 343900.0 25 0 17617.0 + 38423 TRMDELLDC 9 87 548.2427508502145 1094.470948767229 2 548.2437621951103 MULTI CID FTMS 0 0 0 3291 431409.34375 0.8112363270491224 3 -0.045668601989746 1 Unmodified _TRMDELLDC_ REV__ENSG00000137478|ENST00000409418|FCHSD2;REV__ENST00000458644.6_1_11:72700129-72852922:-|nuORF 3.5964929083625545 0.7891324200061827 5 AT 2 -1 4.068 0.0 0.0 0.37169 0.0 0.0 794.2789454486727 125.08384119205311 919.362786640726 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AT 0.37169 - 14 + 1 3.594 37965.8 1.0 290 3000 3291 SUDHL4_400M_050219_1,3292 SUDHL4_400M_050219_1,3292,TRMDELLDC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3294 14.674 376.0 233610.0 25 0 38453.0 2090 APRAPRRWPT 10 94 403.2328843679705 0 403.2321044802666 PEAK CID FTMS 0 0 0 3293 130418.921875 0.6200555172856183 -2 0.0364065170288085 1 Unmodified _APRAPRRWPT_ ENST00000301453.7_1_11:63753415-63753553:+|nuORF 3.876331618118854 0.3961065659209837 5 A 1 9 5.4846 0.0 0.0 0.68178 0.0 0.0 475.25957869512223 255.1247957818969 730.3843744770192 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.68178 + + 5 + 1 3.594 71600.3 1.0 291 3001 3293 SUDHL4_400M_050219_1,3294 SUDHL4_400M_050219_1,3294,APRAPRRWPT False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3296 14.691 683.0 246140.0 25 0 19802.0 19528 LFPEGHFPE 9 184 358.17571121749256 0 358.1760131716728 PEAK CID FTMS 0 0 0 3295 329479.78125 1.0 0 0.0 1 Unmodified _LFPEGHFPE_ ENSG00000080573|ENST00000264828|COL5A3 4.897010918128616 0.3444685223463734 5 {M(Oxidation (M))|F} 1 8 2.4743 0.0 0.0 0.34637 0.0 0.0 192.20748825354136 372.0483771188613 564.2558653724027 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.34637 + + 2 + 1 3.519 133455.3 1.0 292 3002 3295 SUDHL4_400M_050219_1,3296 SUDHL4_400M_050219_1,3296,LFPEGHFPE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3297 14.705 800.0 49879.0 25 0 6428.1 -1 GNGCWDEGEGL 11 85 597.2272808558636 0 597.2264892458916 PEAK CID FTMS 0 0 0 3295 65003.8359375 0.578605287500485 -1 0.0111646652221679 2 Carbamidomethyl (C) _GNGC(Carbamidomethyl (C))WDEGEGL_ ENST00000413312.5_1_2:214149168-214161993:+|nuORF 1.1933415558491238 0.4761840153648598 5 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.45994 0.0 0.0 141.99005695719217 900.4159639947874 1042.4060209519796 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.45994 - 2 + 1 3.519 33588.3 0.6200000047683716 293 3002 3295 SUDHL4_400M_050219_1,3297 SUDHL4_400M_050219_1,3297,GNGCWDEGEGL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3299 14.71 169.0 448450.0 25 0 124350.0 + 28318 PRRPPPPPP 9 79 505.79870937696006 1009.58286582072 2 505.7988769412041 MULTI CID FTMS 0 0 0 3298 507826.84375 0.713733961752846 10 -0.1185541152954101 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 42.09456458481378 0.0639583784996157 5 P[KT]PVHPP 8 5 36.464 0.0 0.0 3.6118 0.0 0.0 0.0 153.07863794498283 153.07863794498283 3.598206704033011 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 P[KT]PVHPP 3.6118 - 141 + 1 3.519 65657.0 1.0 294 3003 3298 SUDHL4_400M_050219_1,3299 SUDHL4_400M_050219_1,3299,PRRPPPPPP True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3300 14.724 800.0 234710.0 25 0 51250.0 + -1 EPYFLRMT 8 112 536.7608288026787 0 536.7601196169853 PEAK CID FTMS 0 0 0 3298 91220.921875 0.2813935793664274 12 -0.1263322830200195 2 Oxidation (M) _EPYFLRM(Oxidation (M))T_ REV__ENSG00000110080|ENST00000444328|ST3GAL4;REV__nc|ENSG00000110080|Q11206-2|ST3GAL4;REV__nc|ENSG00000110080|Q11206-3|ST3GAL4;REV__nc|ENSG00000110080|Q11206-4|ST3GAL4;REV__nc|ENSG00000110080|Q11206-5|ST3GAL4;REV__nc|ENSG00000110080|Q11206-6|ST3GAL4;REV__nc|ENSG00000110080|Q11206-7|ST3GAL4 8.593279151180031 0.5573742999696857 5 A 1 -1 5.4846 0.0 0.0 0.51185 0.0 0.0 409.1996838731323 588.2479342096311 997.4476180827636 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.51185 - 29 + 1 3.519 145319.4 0.949999988079071 295 3003 3298 SUDHL4_400M_050219_1,3300 SUDHL4_400M_050219_1,3300,EPYFLRMT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3301 14.734 596.0 197460.0 25 0 11712.0 + 25175 MSFCPRCRP 9 179 366.1656609056221 0 366.1658813357353 PEAK CID FTMS 0 0 0 3298 80672.34375 1.0 0 0.0 3 Unmodified _MSFCPRCRP_ REV__ENST00000381989.3_1_13:25020883-25021248:-|nuORF 5.296884461304476 0.3444685223463735 5 {M(Oxidation (M))|F} 1 -1 6.1536 0.0 0.0 0.84259 0.0 0.0 365.1706568282385 215.0835360162719 580.2541928445104 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.84259 + + 8 + 1 3.519 97269.4 1.0 296 3003 3298 SUDHL4_400M_050219_1,3301 SUDHL4_400M_050219_1,3301,MSFCPRCRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3303 14.738 0.58 95710000.0 25 0 15396000.0 + -1 IQRLETMK 8 66 517.7865886450584 1033.5586243569169 2 517.7872192263603 MULTI CID FTMS 0 0 0 3302 105602000.0 0.5457620682866067 12 -0.1007642745971679 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 5 KTT[{I|L}P][WP]K 8 -1 44.742 0.0 0.0 4.3289 0.0 0.0 63.99528744773847 0.0 63.99528744773847 0.0 33.773043837969325 0.0 0.0 0 0.9247425010840048 0.0 1.3494850021680094 0.2614393726401688 KTT[{I|L}P][WP]K 4.3289 - 61 + 1 3.519 48865.1 1.0 297 3004 3302 SUDHL4_400M_050219_1,3303 SUDHL4_400M_050219_1,3303,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3304 14.752 800.0 106990.0 25 0 5805.3 + -1 LTTLDCCYV 9 121 544.2428101214175 0 544.2443725466728 PEAK CID FTMS 0 0 0 3302 108972.0703125 0.4738943086171527 9 -0.0890455245971679 2 Carbamidomethyl (C) _LTTLDC(Carbamidomethyl (C))CYV_ REV__ENSG00000106069|ENST00000222792|CHN2;REV__nc|ENSG00000106069|P52757-3|CHN2;REV__nc|ENSG00000106069|P52757-4|CHN2;REV__nc|ENSG00000106069|P52757-6|CHN2;REV__nc|ENSG00000106069|P52757-7|CHN2;REV__nc|ENSG00000106069|P52757-8|CHN2;REV__nc|ENSG00000106069|P52757-9|CHN2 16.942295170755138 0.2326366549411506 5 TD 2 -1 12.959 0.0 0.0 1.1927 0.0 0.0 771.2908742938131 96.08267389468983 867.3735481885029 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TD 1.1927 - 70 + 1 3.519 70118.2 0.6000000238418579 298 3004 3302 SUDHL4_400M_050219_1,3304 SUDHL4_400M_050219_1,3304,LTTLDCCYV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3305 14.766 800.0 198950.0 25 0 30125.0 + 9767 FNDPNAKEM 9 129 541.2346572049775 1080.4547614767548 2 541.2349731326103 MULTI CID FTMS 0 0 0 3302 115463.1796875 0.1462088433907051 -10 0.2244195938110351 3 Oxidation (M) _FNDPNAKEM(Oxidation (M))_ ENSG00000056097|ENST00000265069|ZFR 86.33184430468982 0.0159826143231117 5 {M(Oxidation (M))|F}NDPNAKE{M(Oxidation (M))|F} 9 0 + 80.646 0.0 0.0 7.4641 7.4641 93.312 0.0 0.0 0.0 33.865254556960465 13.46787486224656 13.46787486224656 9.208187539523747 0 1.0 0.0 1.055462187404089 0.6549471895720984 + + {M(Oxidation (M))|F}NDPNAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}NDPGGAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}GGDPNAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}GGDPGGAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}NDPNP[YT]N;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}M[KS]PDNE;{M(Oxidation (M))|F}ND[QT]V[NP]{M(Oxidation (M))|F};{M(Oxidation (M))|F}NYYAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}GGDPNP[YT]N;{M(Oxidation (M))|F}NDPGGP[YT]N 7.4641;6.6119;6.6119;5.7636;4.9047;4.6001;4.5211;4.3163;4.0525;4.0525 +;-;-;-;-;-;-;-;-;- + 1441 + 1 3.519 119254.7 0.6399999856948853 299 3004 3302 SUDHL4_400M_050219_1,3305 SUDHL4_400M_050219_1,3305,FNDPNAKEM True False FNDPNAKEM 14.766265 541.23497313261 7100689.0 3302.0 ENSG00000056097|ENST00000265069|ZFR 10.038429260253906 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3306 14.78 800.0 165080.0 25 0 19768.0 + 17628 KPTAAFHLL 9 107 499.2934476538337 996.5723423744674 2 499.2938110232353 MULTI CID FTMS 0 0 0 3302 104230.0078125 0.3173087900167837 -15 0.2499933242797851 4 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 34.10243960390752 0.1078313939113124 5 KPT 3 -1 35.15 0.0 0.0 3.5271 0.0 0.0 0.0 667.3555513847466 667.3555513847466 16.170912423450403 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.9247425010840048 0.0 KPT 3.5271 + + 95 + 1 3.519 103835.7 0.6200000047683716 300 3004 3302 SUDHL4_400M_050219_1,3306 SUDHL4_400M_050219_1,3306,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3315 14.823 800.0 96740.0 25 0 12159.0 + 16435 KAEDSARTL 9 102 495.7646353480951 989.51471776299 2 495.7654296755791 MULTI CID FTMS 0 0 0 3314 92981.625 0.5853169716450736 -17 0.2938041687011719 1 Unmodified _KAEDSARTL_ ENSG00000174989|ENST00000652555|FBXW8;nc|ENSG00000174989|Q8N3Y1-2|FBXW8 30.7034409873982 0.1405282614900322 5 KAEDS 5 4 48.236 0.0 0.0 4.8748 0.0 0.0 0.0 456.2580355279906 456.2580355279906 35.56032441091959 0.0 0.0 0.0 0 1.548455006504028 0.0 0.0 0.0 + KAEDS 4.8748 + + 252 + 1 3.493 64247.6 0.800000011920929 301 3012 3314 SUDHL4_400M_050219_1,3315 SUDHL4_400M_050219_1,3315,KAEDSARTL False True KAEDSARTL 14.822847 495.765429675579 738235.0 3314.0 ENSG00000174989|ENST00000652555|FBXW8;;nc|ENSG00000174989|Q8N3Y1-2|FBXW8 5.230837980906169 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3322 14.859 800.0 70936.0 25 0 6604.4 -1 KEQLQKMK 8 88 524.7942683974555 0 524.7945434451103 PEAK CID FTMS 0 0 0 3321 45947.02734375 0.5014416014565393 1 -0.0163393020629882 1 Oxidation (M) _KEQLQKM(Oxidation (M))K_ ENSG00000119596|ENST00000325680|YLPM1;nc|ENSG00000119596|P49750-1|YLPM1;nc|ENSG00000119596|P49750-3|YLPM1 21.74664581756881 0.3849600028047819 5 {M(Oxidation (M))|F}T 2 -1 28.271 0.0 0.0 2.6987 0.0 0.0 146.10262263299848 650.3647989891911 796.4674216221895 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}T 2.6987 - 36 + 1 3.493 47801.3 0.6100000143051147 302 3018 3321 SUDHL4_400M_050219_1,3322 SUDHL4_400M_050219_1,3322,KEQLQKMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3326 14.872 139.0 303510.0 25 0 17883.0 + 13717 HQQPPSQQY 9 79 556.7598440648626 1111.505135196525 2 556.7597534060478 MULTI CID FTMS 0 0 0 3325 380811.59375 0.5381552351464871 17 -0.0774497985839843 1 Unmodified _HQQPPSQQY_ ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18 62.57269311338072 0.0246576765497938 5 [HQ]QPPSQQY 9 0 + 56.577 0.0 0.0 5.0901 5.0901 79.47 0.0 0.0 0.0 1.6334835803019132 9.879458030070076 1.6334835803019132 1.6334835803019132 0 1.242992819099939 0.0 0.9247425010840048 0.3807196863200844 + + [HQ]QPPSQQY;QQHPPSQQY;[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}PPSQQY;[HQ][AG]PPSQQY;[HQ]QPPS[AG]QY;QQHPPS[AG]QY;[YQ][{M(Oxidation (M))|F}V]HQQY;[HQ][AG]PPS[AG]QY;[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}PPS[AG]QY;[YQ][{M(Oxidation (M))|F}V]H[AG]QY 5.0901;4.9432;4.5485;4.2617;4.2617;4.1147;3.5255;3.4372;3.3775;2.6922 +;-;-;-;-;-;-;-;-;- + 325 1 3.493 37531.9 1.0 303 3021 3325 SUDHL4_400M_050219_1,3326 SUDHL4_400M_050219_1,3326,HQQPPSQQY True True HQQPPSQQY 14.871782 556.759753406048 17474688.0 3325.0 ENSG00000141380|ENST00000415083|SS18;;nc|ENSG00000141380|Q15532-2|SS18 10.884657859802246 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3343 14.944 564.0 121140.0 25 0 10677.0 + -1 QKETVMDAR 9 91 547.2673605258522 1092.5201681185042 2 547.2674438357353 MULTI CID FTMS 0 0 0 3342 85599.53125 0.1469366291548501 -27 0.1325922012329101 1 Oxidation (M) _QKETVM(Oxidation (M))DAR_ REV__ENSG00000166888|ENST00000300134|STAT6;REV__ENST00000557781.5_1_12:57498159-57499088:-|nuORF;REV__nc|ENSG00000166888|P42226-2|STAT6;REV__nc|ENSG00000166888|P42226-3|STAT6 13.042465956692816 0.4836390050082244 5 [KQ]EYSSSKH 9 -1 [KQ]E + + 27.211 11.84 3.0737 2.4907 2.4907 53.379 0.0 0.0 0.0 0.0 6.0403972069151735 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 [KQ]EYSSSKH 2.4907 - 263 + 1 3.493 61713.4 1.0 304 3037 3342 SUDHL4_400M_050219_1,3343 SUDHL4_400M_050219_1,3343,QKETVMDAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3348 14.964 283.0 276430.0 25 0 78533.0 + 28319 PRRPPPPPP 9 75 505.79870937696006 1009.58286582072 2 505.7984496951103 MULTI CID FTMS 0 0 0 3347 182121.78125 0.2559661862164955 48 -0.2929582595825195 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 48.345845343767074 0.0439967357579942 5 PR[YK]PPP 7 4 38.192 0.0 0.0 3.783 0.0 0.0 156.1012135236344 0.0 156.1012135236344 0.0 28.571231544599485 0.0 0.0 0 1.774227503252014 0.0 0.0 0.5 PR[YK]PPP 3.783 - 150 1 3.493 66853.8 1.0 305 3041 3347 SUDHL4_400M_050219_1,3348 SUDHL4_400M_050219_1,3348,PRRPPPPPP True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3356 14.993 7.7 7279600.0 25 0 1090900.0 + -1 IQRLETMK 8 66 517.7865886450584 1033.5586243569169 2 517.7870971560478 MULTI CID FTMS 0 0 0 3355 7026070.0 0.0363114571232218 56 -0.3212900161743164 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 5 T{M(Oxidation (M))|F}K 3 -1 33.857 0.0 0.0 3.2757 0.0 0.0 639.3700390071104 0.0 639.3700390071104 0.0 20.5854562117252 0.0 0.0 0 1.0 0.0 0.0 0.3054621874040891 T{M(Oxidation (M))|F}K 3.2757 + + 53 + 1 3.493 48793.0 1.0 306 3048 3355 SUDHL4_400M_050219_1,3356 SUDHL4_400M_050219_1,3356,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3357 14.996 150.0 655550.0 25 0 95798.0 + 17527 KPLNLHLRY 9 95 385.23174604443705 1152.6734087335112 3 385.2316467165947 MULTI CID FTMS 0 0 0 3355 352021.6875 1.0 0 0.0 2 Unmodified _KPLNLHLRY_ REV__ENSG00000150773|ENST00000280350|PIH1D2 12.531546534597751 0.4974689918368763 5 K{I|L} 2 -1 24.024 0.0 0.0 2.0842 0.0 0.0 0.0 908.4697994148806 908.4697994148806 10.52887198244136 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 K{I|L} 2.0842 - 40 + 1 3.493 85955.7 1.0 307 3048 3355 SUDHL4_400M_050219_1,3357 SUDHL4_400M_050219_1,3357,KPLNLHLRY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3361 15.022 800.0 130660.0 25 0 19314.0 + 9768 FNDPNAKEM 9 122 541.2346572049775 1080.4547614767548 2 541.2354003787041 MULTI CID FTMS 0 0 0 3360 186478.859375 0.2361346571247108 37 -0.2410097122192382 1 Oxidation (M) _FNDPNAKEM(Oxidation (M))_ ENSG00000056097|ENST00000265069|ZFR 80.6760300276096 0.0173529540220427 5 {M(Oxidation (M))|F}NDPNAKE{M(Oxidation (M))|F} 9 0 + 81.143 0.0 0.0 7.5101 7.5101 93.409 0.0 0.0 0.0 49.02297888278489 17.96311164755508 17.96311164755508 9.208187539523747 0 1.305462187404089 0.0 0.6747425010840047 0.6549471895720985 + + {M(Oxidation (M))|F}NDPNAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}NDPGGAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}GGDPNAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}GGDPGGAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}NDP[QA]{M(Oxidation (M))|F}DQ;{M(Oxidation (M))|F}GGDP[QA]{M(Oxidation (M))|F}DQ;{M(Oxidation (M))|F}NYYAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}YYNAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}GGYYAKE{M(Oxidation (M))|F};{M(Oxidation (M))|F}ND[HK]HH{M(Oxidation (M))|F} 7.5101;6.6578;6.6578;5.8096;5.2871;4.4348;4.0613;3.8523;3.204;3.1877 +;-;-;-;-;-;-;-;-;- + 724 + 1 3.493 80155.2 0.6800000071525574 308 3051 3360 SUDHL4_400M_050219_1,3361 SUDHL4_400M_050219_1,3361,FNDPNAKEM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3365 15.045 729.0 98473.0 25 0 5137.5 + 2603 ASNVTNKTD 9 125 496.2384420602888 990.4623311873776 2 496.2381774783134 MULTI CID FTMS 0 0 0 3364 122570.8359375 0.4498999321754875 -15 0.0818557739257812 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNVTNKTD_ ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 57.24910588100465 0.0276051374632116 5 EANVTNKTD 9 2 + 74.668 0.0 0.0 7.5387 7.5387 93.497 0.0 0.0 0.0 51.96947554448785 2.236359029459777 2.236359029459777 9.208187539523747 0 1.2302046884880935 0.0 1.173877368056628 0.3494850021680094 EANVTNKTD;EANVTGGKTD;EAGGVTNKTD;EAGGVTGGKTD;EAN[KA]DKTD;EAGG[KA]DKTD;EAQ[KG]DKTD;EA[AG][KG]DKTD;E[WE][{I|L}A]KTD;[WQ]V[HD]{[VA]|[{I|L}G]}H 7.5387;6.609;6.609;5.6837;5.079;4.1493;3.7396;2.8099;1.8475;1.7044 -;-;-;-;-;-;-;-;-;- 946 + 1 3.493 58794.2 1.0 309 3054 3364 SUDHL4_400M_050219_1,3365 SUDHL4_400M_050219_1,3365,ASNVTNKTD True False ASNVTNKTD 15.044938 496.238177478313 1044750.75 3364.0 nc|ENSG00000092199|P07910-3|HNRNPC;;nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;nc|ENSG00000092199|P07910|HNRNPC 7.8676808675130205 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3370 15.066 362.0 135260.0 25 0 11686.0 + 12031 GQAHPSASY 9 87 459.20971569810285 916.4048784630056 2 459.2097350955009 MULTI CID FTMS 0 0 0 3369 86069.59375 0.6105031581070642 -12 0.0769119262695312 1 Unmodified _GQAHPSASY_ ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C 19.256988751693697 0.3154191944385105 5 SY 2 7 25.969 0.0 0.0 2.8338 0.0 0.0 648.2985990214027 0.0 648.2985990214027 0.0 18.97940008672037 0.0 0.0 0 0.5 0.0 0.0 0.0 + SY 2.8338 + + 53 + 1 3.493 43023.9 1.0 310 3058 3369 SUDHL4_400M_050219_1,3370 SUDHL4_400M_050219_1,3370,GQAHPSASY False True GQAHPSASY 15.066004 459.209735095501 530301.5625 3369.0 nc|ENSG00000171988|Q15652-3|JMJD1C;;nc|ENSG00000171988|Q15652-2|JMJD1C;;ENSG00000171988|ENST00000399262|JMJD1C 5.641604741414388 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3373 15.079 392.0 303590.0 25 0 47759.0 7603 EIPIAWRKI 9 123 375.89636588324834 1124.667268249945 3 375.8959533572197 MULTI CID FTMS 0 0 0 3372 142715.03125 0.6760107193492129 -17 0.1020317077636718 1 Unmodified _EIPIAWRKI_ ENSG00000157106|ENST00000446231|SMG1;nc|ENSG00000157106|Q96Q15-2|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1 17.11289562659939 0.3734572693229295 5 KKS 3 8 16.242 0.0 0.0 1.4442 0.0 0.0 159.0916786803951 619.3180025690061 778.4096812494013 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.3807196863200844 KKS 1.4442 - 146 + 1 3.493 96183.1 1.0 311 3060 3372 SUDHL4_400M_050219_1,3373 SUDHL4_400M_050219_1,3373,EIPIAWRKI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3385 15.133 613.0 89302.0 25 0 4891.7 + 13718 HQQPPSQQY 9 100 556.7598440648626 1111.505135196525 2 556.7589599490166 MULTI CID FTMS 0 0 0 3384 82262.4296875 0.116251600315669 67 -0.4718036651611328 1 Unmodified _HQQPPSQQY_ ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18 56.17704186161178 0.0281986971544335 5 [NP]TPQHQQY 9 5 + 48.511 0.0 0.0 4.3645 4.3645 76.003 0.0 0.0 0.0 0.5308294578580828 9.577570906191896 0.5308294578580828 0.5308294578580828 0 0.6677353201839438 1.3010299956639813 1.566901560044258 0.2396518287104437 [NP]TPQHQQY;[AG]HQP[PS]QQY;[AG]QHP[PS]QQY;[AG]SPPQHQQY;[NP]TP[AG]HQQY;[NP]TPQH[AG]QY;[AG]HQP[PS][AG]QY;[AG]QHP[PS][AG]QY;[AG]H[AG]P[PS]QQY;[HQ]QP[PS]QQY 4.3645;4.3167;4.1211;3.7072;3.536;3.536;3.4922;3.2966;3.257;3.1374 -;-;-;-;-;-;-;-;-;+ + 744 1 3.493 48302.7 1.0 312 3071 3384 SUDHL4_400M_050219_1,3385 SUDHL4_400M_050219_1,3385,HQQPPSQQY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3388 15.143 182.0 391330.0 25 0 42958.0 + 1238 AIKDKQVKY 9 92 364.88530527325526 1091.6340864199658 3 364.8851501345634 MULTI CID FTMS 0 0 0 3387 332627.375 0.619032664266391 -7 0.0374555587768554 1 Unmodified _AIKDKQVKY_ ENSG00000185787|ENST00000426013|MORF4L1;ENST00000433352.1_1_X:64550801-64551062:-|nuORF;ENST00000557961.5_1_15:79165359-79178570:+|nuORF;ENST00000558522.5_1_15:79165359-79183469:+|nuORF;ENST00000558539.5_1_15:79170271-79178570:+|nuORF;ENST00000558893.5_1_15:79165359-79184661:+|nuORF;ENST00000559619.5_1_15:79165359-79179692:+|nuORF;ENST00000561171.5_1_15:79170562-79187198:+|nuORF;nc|ENSG00000185787|Q9UBU8|MORF4L1 20.41453444215458 0.284085796332423 5 A{I|L}K 3 6 46.682 0.0 0.0 4.2764 0.0 0.0 0.0 776.3917940729124 776.3917940729124 31.989700043360187 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + A{I|L}K 4.2764 + + 136 + 1 3.493 60333.4 1.0 313 3073 3387 SUDHL4_400M_050219_1,3388 SUDHL4_400M_050219_1,3388,AIKDKQVKY False True AIKDKQVKY 15.14312 364.8854 1808288.375 3387.0 ENST00000557961.5_1_15:79165359-79178570:+|nuORF;;ENST00000433352.1_1_X:64550801-64551062:-|nuORF;;ENST00000559619.5_1_15:79165359-79179692:+|nuORF;;ENSG00000185787|ENST00000426013|MORF4L1;;ENST00000558522.5_1_15:79165359-79183469:+|nuORF;;nc|ENSG00000185787|Q9UBU8|MORF4L1;;ENST00000561171.5_1_15:79170562-79187198:+|nuORF;;ENST00000558539.5_1_15:79170271-79178570:+|nuORF;;ENST00000558893.5_1_15:79165359-79184661:+|nuORF 2.3274073600769043 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3389 15.148 273.0 319100.0 25 0 39931.0 + 33426 SHVVVKND 8 100 470.24812109370777 938.4816892542156 2 470.2475463747978 MULTI CID FTMS 0 0 0 3387 246723.84375 0.5226784469799508 -7 0.0374555587768554 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SHVVVKND_ ENSG00000067048|ENST00000336079|DDX3Y;ENST00000493363.1_1_Y:15016814-15021353:+|nuORF;nc|ENSG00000067048|O15523-3|DDX3Y 85.64151623876279 0.067157859451692 5 {[YC]|[HE]}VVVKND 8 1 + 58.398 0.0 0.0 6.2226 6.2226 83.351 0.0 0.0 0.0 1.952723255276247 1.952723255276247 1.952723255276247 1.952723255276247 0 1.924742501084005 0.0 0.2134679910804404 1.319341519366547 {[YC]|[HE]}VVVKND;{[YC]|[HE]}VVV[QT]Q;[HV]EVV[QT]Q;{[YC]|[HE]}VVVKGGD;[HV]VEV[QT]Q;VVHEV[QT]Q;VV[{M(Oxidation (M))|F}E]VV[{M(Oxidation (M))|F}T];{[YC]|[HE]}VKRRD;DDKVV[HV]Q;[QP]{I|L}[QP][QT]Q 6.2226;6.0145;5.3688;4.8633;3.6285;3.2162;2.4754;2.3229;1.07;0.61632 -;-;-;-;-;-;-;-;-;- 181 + 1 3.493 71729.0 1.0 314 3073 3387 SUDHL4_400M_050219_1,3389 SUDHL4_400M_050219_1,3389,SHVVVKND True False SHVVVKND 15.148154 470.247546374798 1643551.75 3387.0 ENSG00000067048|ENST00000336079|DDX3Y;;ENST00000493363.1_1_Y:15016814-15021353:+|nuORF;;nc|ENSG00000067048|O15523-3|DDX3Y 10.706098715464272 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3390 15.154 329.0 223760.0 25 0 24638.0 + 2007 APARPAPAA 9 83 411.23537748267455 820.4562020321491 2 411.2355529665947 MULTI CID FTMS 0 0 0 3387 123814.40625 0.1936984252883138 -39 0.2175712585449218 3 Unmodified _APARPAPAA_ REV__ENSG00000125533|ENST00000612929|BHLHE23;REV__nc|ENSG00000125533|Q8NDY6|BHLHE23 23.1484247019978 0.2366544122328345 5 APAA 4 -1 21.37 0.0 0.0 2.6047 0.0 0.0 492.2817141380581 0.0 492.2817141380581 0.0 8.895840698003 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.0 APAA 2.6047 + + 28 1 3.493 63849.7 1.0 315 3073 3387 SUDHL4_400M_050219_1,3390 SUDHL4_400M_050219_1,3390,APARPAPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3391 15.168 800.0 88959.0 25 0 7299.6 + 10407 FSYIDLLSSAN 11 95 615.3044518264273 1228.5943507196546 2 615.3048583865166 MULTI CID FTMS 0 0 0 3387 115463.265625 0.8366952568108418 -6 0.0333890914916992 4 Unmodified _FSYIDLLSSAN_ REV__ENSG00000166197|ENST00000605788|NOLC1;REV__nc|ENSG00000166197|Q14978-2|NOLC1;REV__nc|ENSG00000166197|Q14978-3|NOLC1 38.17557092003332 0.2405003631267018 5 PSQSAN 6 -1 70.923 0.0 0.0 5.7727 0.0 0.0 626.3271798788535 0.0 626.3271798788535 0.0 54.72479721008234 0.0 0.0 0 1.7302046884880935 0.0 1.8494850021680087 0.0 PSQSAN 5.7727 - 204 1 3.493 56980.8 0.4799999892711639 316 3073 3387 SUDHL4_400M_050219_1,3391 SUDHL4_400M_050219_1,3391,FSYIDLLSSAN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3396 15.192 505.0 181900.0 25 0 60222.0 1242 AIKGVGRRY 9 83 510.3095223167068 1018.6044917002135 2 510.3093749880791 MULTI CID FTMS 0 0 0 3395 110329.28125 0.7592458802928781 1 -0.0114593505859375 1 Unmodified _AIKGVGRRY_ ENSG00000231500|ENST00000439602|RPS18;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 16.942295170755138 0.3780752226737986 5 [{I|L}A]K 3 6 22.777 0.0 0.0 2.2361 0.0 0.0 0.0 703.3660372369749 703.3660372369749 10.94089970281303 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.4247425010840047 + [{I|L}A]K 2.2361 + + 40 + 1 3.493 77317.8 1.0 317 3077 3395 SUDHL4_400M_050219_1,3396 SUDHL4_400M_050219_1,3396,AIKGVGRRY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3398 15.2 310.0 205300.0 25 0 14124.0 + -1 QKETVMDAR 9 95 547.2673605258522 1092.5201681185042 2 547.2674438357353 MULTI CID FTMS 0 0 0 3397 194068.375 0.3331297780682576 14 -0.0695962905883789 1 Oxidation (M) _QKETVM(Oxidation (M))DAR_ REV__ENSG00000166888|ENST00000300134|STAT6;REV__ENST00000557781.5_1_12:57498159-57499088:-|nuORF;REV__nc|ENSG00000166888|P42226-2|STAT6;REV__nc|ENSG00000166888|P42226-3|STAT6 13.042465956692816 0.4836390050082244 5 [{I|L}A]WSSY 6 -1 23.721 0.0 0.0 2.1712 0.0 0.0 0.0 382.17320734097046 382.17320734097046 5.761839289602406 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 [{I|L}A]WSSY 2.1712 - 287 1 3.493 55168.3 1.0 318 3078 3397 SUDHL4_400M_050219_1,3398 SUDHL4_400M_050219_1,3398,QKETVMDAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3402 15.22 552.0 220810.0 25 0 49312.0 + 28320 PRRPPPPPP 9 102 505.79870937696006 1009.58286582072 2 505.7985107302666 MULTI CID FTMS 0 0 0 3401 162363.1875 0.2281961311880633 88 -0.8231744766235352 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 57.47134341890925 0.0274820932774257 5 PR[YK]PPP 7 4 43.676 0.0 0.0 4.3262 0.0 0.0 156.10142714668126 0.0 156.10142714668126 0.0 19.19547293177743 0.0 0.0 0 1.7302046884880935 0.0 0.0 0.8494850021680094 PR[YK]PPP 4.3262 - 251 1 3.493 97276.3 1.0 319 3081 3401 SUDHL4_400M_050219_1,3402 SUDHL4_400M_050219_1,3402,PRRPPPPPP True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3409 15.245 21.0 2592800.0 25 0 425680.0 + -1 IQRLETMK 8 63 517.78680955543 1033.5590661776598 2 517.7869750857353 MULTI CID FTMS 0 0 0 3408 2601901.75 0.5837899833831212 -25 0.1566286087036132 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 5 KTT[{I|L}P][WP]K 8 -1 48.123 0.0 0.0 4.656 0.0 0.0 63.99917920446564 0.0 63.99917920446564 0.0 33.65865011156764 0.0 0.0 0 1.274227503252014 0.0 1.3494850021680094 0.25 KTT[{I|L}P][WP]K 4.656 - 59 + 1 3.493 51653.2 1.0 320 3087 3408 SUDHL4_400M_050219_1,3409 SUDHL4_400M_050219_1,3409,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3433 15.344 370.0 169630.0 25 0 8676.4 + 24314 MDTPLPPPGRT 11 104 394.5384803695213 1180.593611708764 3 394.5387145876884 MULTI CID FTMS 0 0 0 3432 98368.28125 0.2707732446063154 -15 0.0604496002197265 1 Unmodified _MDTPLPPPGRT_ REV__ENSG00000164077|ENST00000296473|MON1A;REV__nc|ENSG00000164077|Q86VX9|MON1A 4.897010918128616 0.8520435188433833 5 P{I|L}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 6 -1 24.818 0.0 0.0 2.1021 0.0 0.0 429.2389496988015 0.0 429.2389496988015 0.0 12.343353322550444 0.0 0.0 0 0.5 0.0 0.0 0.1382104921644452 P{I|L}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}K 2.1021 - 172 + 1 3.493 57645.5 1.0 321 3110 3432 SUDHL4_400M_050219_1,3433 SUDHL4_400M_050219_1,3433,MDTPLPPPGRT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3438 15.373 800.0 156550.0 25 0 20222.0 + -1 KRRWNMMK 8 97 591.3045840402148 1180.5946151472294 2 591.3041259646416 MULTI CID FTMS 0 0 0 3437 133953.390625 0.3633349291275792 -8 0.0386676788330078 1 2 Oxidation (M) _KRRWNM(Oxidation (M))M(Oxidation (M))K_ REV__ENST00000344293.5_1_10:7866412-8006047:+|nuORF 16.942295170755138 0.6606234159769251 5 T{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 4 -1 30.604 0.0 0.0 2.5923 0.0 0.0 639.3703334010082 0.0 639.3703334010082 0.0 4.12794683835358 0.0 0.0 0 1.360924374808178 0.0 0.3807196863200844 0.0 T{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 2.5923 - 328 1 3.493 97801.7 0.5 322 3114 3437 SUDHL4_400M_050219_1,3438 SUDHL4_400M_050219_1,3438,KRRWNMMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3439 15.386 800.0 110270.0 25 0 14860.0 -1 HRIYSCSMK 9 92 570.7678427016637 1139.5211324701272 2 570.7673828005791 MULTI CID FTMS 0 0 0 3437 89586.5625 0.5474648263345024 -4 0.0225811004638671 2 Oxidation (M) _HRIYSCSM(Oxidation (M))K_ ENST00000251047.5_1_18:56996671-56996734:-|nuORF 15.847184025352805 0.4077185912009129 5 KC(Carbamidomethyl (C))C(Carbamidomethyl (C))VDAAEK 9 -1 56.094 0.0 0.0 4.9226 0.0 0.0 60.03312253876408 0.0 60.03312253876408 0.0 24.22167511924052 0.0 0.0 0 0.0 0.0 1.424742501084005 0.3252574989159953 KC(Carbamidomethyl (C))C(Carbamidomethyl (C))VDAAEK 4.9226 - 918 + 1 3.493 71573.8 0.449999988079071 323 3114 3437 SUDHL4_400M_050219_1,3439 SUDHL4_400M_050219_1,3439,HRIYSCSMK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3440 15.4 800.0 186300.0 25 0 15835.0 -1 0 65 628.7853296261524 2511.1122126382093 4 629.0367309451103 MULTI CID FTMS 0 0 0 3437 67734.1015625 0.2807179349696632 -9 0.0427303314208984 3 5 [RD]WRDD 6 -1 39.481 0.0 0.0 1.5723 0.0 0.0 0.0 1664.7248718172932 1664.7248718172932 28.51219677964764 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.4247425010840047 [RD]WRDD 1.5723 - 97 1 3.493 117875.6 0.3899999856948852 324 3114 3437 SUDHL4_400M_050219_1,3440 SUDHL4_400M_050219_1,3440, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3443 15.41 135.0 498670.0 25 0 87722.0 + 2008 APARPAPAA 9 68 411.23537748267455 820.4562020321491 2 411.2354003787041 MULTI CID FTMS 0 0 0 3442 524580.375 0.82066696156089 4 -0.0444211959838867 1 Unmodified _APARPAPAA_ REV__ENSG00000125533|ENST00000612929|BHLHE23;REV__nc|ENSG00000125533|Q8NDY6|BHLHE23 36.04419817259434 0.0971720506436186 5 [PA]ARPAPAA 9 -1 + 42.717 0.0 0.0 5.2065 5.2065 85.67 0.0 0.0 0.0 20.2119811855394 23.53585325153396 20.2119811855394 8.010299956639805 0 0.718765315847925 1.5228787452803376 0.0 0.0 [PA]ARPAPAA;[PA]ARPPAAA;[PA]{[QN]|[E{I|L}]|[KN]}[H{I|L}]AA 5.2065;4.2302;1.8674 +;-;- + 50 1 3.493 59125.1 1.0 325 3116 3442 SUDHL4_400M_050219_1,3443 SUDHL4_400M_050219_1,3443,APARPAPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3444 15.423 800.0 95502.0 25 0 6028.8 + 492 AEGPDHHSL 9 111 481.720407412446 961.426261891692 2 481.7196838259697 MULTI CID FTMS 0 0 0 3442 65722.0703125 0.6793845629529607 1 -0.0191078186035156 2 Unmodified _AEGPDHHSL_ ENST00000345523.8_1_19:51302184-51307950:-|nuORF;ENST00000593287.5_1_19:51302549-51307836:-|nuORF;ENST00000595794.5_1_19:51302184-51305576:-|nuORF 43.85829265575387 0.0542763391141878 5 {[CP]|[EA]}GPDHHS{I|L} 9 0 {[CP]|[EA]} + + 34.461 3.7236 1.8611 3.5844 3.5844 55.218 0.0 0.0 0.0 0.0 -0.768127606544823 -0.768127606544823 0.0 0 0.805462187404089 0.0 0.6421590589602533 0.0 + + {[CP]|[EA]}GPDHHS{I|L} 3.5844 + + 254 + 1 3.493 62992.9 0.4600000083446502 326 3116 3442 SUDHL4_400M_050219_1,3444 SUDHL4_400M_050219_1,3444,AEGPDHHSL True True AEGPDHHSL 15.423438 481.71968382597 582844.3125 3442.0 ENST00000595794.5_1_19:51302184-51305576:-|nuORF;;ENST00000345523.8_1_19:51302184-51307950:-|nuORF;;ENST00000593287.5_1_19:51302549-51307836:-|nuORF 7.581788698832194 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3448 15.443 528.0 129140.0 25 0 11325.0 + 32152 RVQEGNESY 9 89 541.2492209726003 1080.4838890120004 2 541.2491943240166 MULTI CID FTMS 0 0 0 3447 125626.3046875 0.1677057956101419 -14 0.1180763244628906 1 Unmodified _RVQEGNESY_ ENSG00000105369|ENST00000221972|CD79A 66.45667989310934 0.0225072657982126 5 [RV]QEGNESY 9 0 + 82.207 0.0 0.0 7.6083 7.6083 93.655 0.0 0.0 0.0 13.97022398111794 68.84189037913593 13.97022398111794 9.208187539523747 0 1.0 0.9208187539523752 0.3494850021680094 1.1421590589602533 + + [RV]QEGNESY;[RV]QEGGGESY;[RV][AG]EGNESY;[RV]QEGNTDY;[RV][AG]EGGGESY;[RV]QEGGGTDY;[RV][AG]EGNTDY;{[QD]|[EN]|[WG]|[KD]|[RS]}[R{I|L}]GNESY;[RV][AG]EGGGTDY;{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]KNESY 7.6083;6.7561;6.7561;6.5146;5.9079;5.6624;5.6624;4.8577;4.8142;4.4162 +;-;-;-;-;-;-;-;-;- + 451 1 3.493 59975.1 1.0 327 3119 3447 SUDHL4_400M_050219_1,3448 SUDHL4_400M_050219_1,3448,RVQEGNESY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3449 15.449 292.0 372780.0 25 0 34624.0 -1 0 57 503.2295546705028 2511.111391019514 5 503.2301818728447 MULTI CID FTMS 0 0 0 3447 160485.25 0.9734322031528948 -5 0.0753459930419921 2 5 VT{I|L}DG 5 -1 24.949 0.0 0.0 0.99352 0.0 0.0 1523.5901044616326 499.2593596663773 2022.84946412801 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VT{I|L}DG 0.99352 - 133 + 1 3.493 91195.2 1.0 328 3119 3447 SUDHL4_400M_050219_1,3449 SUDHL4_400M_050219_1,3449, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3454 15.477 800.0 171260.0 25 0 30554.0 28321 PRRPPPPPP 9 109 505.79870937696006 1009.58286582072 2 505.7984191775322 MULTI CID FTMS 0 0 0 3453 105795.59375 0.1486922347499125 130 -1.3747148513793943 1 Unmodified _PRRPPPPPP_ ENSG00000100599|ENST00000216487|RIN3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;nc|ENSG00000100599|Q8TB24-4|RIN3 64.23631603340823 0.0237365939569086 5 PRR{[HG]|PP}PKY 8 3 + 54.844 0.0 0.0 5.4324 5.4324 79.637 0.0 0.0 0.0 0.7525749891599531 2.8477251345862697 0.7525749891599531 0.7525749891599531 0 1.1479400086720375 0.0 0.0 0.0 PRR{[HG]|PP}PKY;RPR{[HG]|PP}PKY;PRR{[HG]|PP}PPPP;RPR{[HG]|PP}PPPP;PRR[YK]KY;RPR[YK]KY;PRR[YK]PPP;RPR[YK]PPP;[RP]R[YK]PPP;PRR{[HG]|PP}[YK]P 5.4324;5.3578;5.1503;5.0758;4.7975;4.7229;4.5086;4.4341;3.7369;2.5062 -;-;+;-;-;-;-;-;-;- + 252 + 1 3.493 111161.3 0.4699999988079071 329 3123 3453 SUDHL4_400M_050219_1,3454 SUDHL4_400M_050219_1,3454,PRRPPPPPP True True RPPRPPPPP 15.477323 505.798419177532 8053659.5 3453.0 ENSG00000142235|ENST00000600059|LMTK3 -0.0942085285981496 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3455 15.488 582.0 232560.0 25 0 36541.0 + -1 VQIAWLTMK 9 104 553.3053681274408 1104.5961833216816 2 553.3048583865166 MULTI CID FTMS 0 0 0 3453 161159.46875 0.5356688388329612 -25 0.1755514144897461 2 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 32.78568957990786 0.1150597335874693 5 TP{I|L}T{M(Oxidation (M))|F}K 6 -1 57.783 0.0 0.0 5.2312 0.0 0.0 399.2228260724625 0.0 399.2228260724625 0.0 38.16901560044258 0.0 0.0 0 1.805462187404089 0.0 0.75 0.0 TP{I|L}T{M(Oxidation (M))|F}K 5.2312 - 392 1 3.493 106466.9 1.0 330 3123 3453 SUDHL4_400M_050219_1,3455 SUDHL4_400M_050219_1,3455,VQIAWLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3456 15.501 800.0 58226.0 25 0 4491.3 -1 0 41 838.0450681541897 2511.113375062769 3 838.3778564333916 MULTI CID FTMS 0 0 0 3453 72204.4921875 1.0 0 0.0 3 5 DN 2 -1 19.776 0.0 0.0 0.78755 0.0 0.0 728.3466845645986 1550.7010410196478 2279.0477255842466 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 DN 0.78755 - 5 + 1 3.493 40426.6 0.3499999940395355 331 3123 3453 SUDHL4_400M_050219_1,3456 SUDHL4_400M_050219_1,3456, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3458 15.506 44.0 1273800.0 25 0 206450.0 + -1 IQRLETMK 8 77 517.78680955543 1033.5590661776598 2 517.7869140505791 MULTI CID FTMS 0 0 0 3457 1186983.75 0.2663241314505956 12 -0.0795555114746093 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 5 KTT[{I|L}P][WP]K 8 -1 43.224 0.0 0.0 4.182 0.0 0.0 63.99896654423714 0.0 63.99896654423714 0.0 29.19978440589176 0.0 0.0 0 1.2614393726401687 0.0 0.9247425010840048 0.6747425010840047 KTT[{I|L}P][WP]K 4.182 - 46 + 1 3.493 45744.4 1.0 332 3124 3457 SUDHL4_400M_050219_1,3458 SUDHL4_400M_050219_1,3458,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3461 15.52 386.0 115120.0 25 0 6326.3 + 6227 DTNADKQL 8 98 452.72192119111 903.42928944902 2 452.7220031619072 MULTI CID FTMS 0 0 0 3460 101585.65625 0.5096101140662892 -22 0.2010822296142578 1 Unmodified _DTNADKQL_ ENSG00000163220|ENST00000368738|S100A9 58.6788170122104 0.1149141431586871 5 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L} 8 0 + 50.901 0.0 0.0 5.6341 5.6341 89.81 0.0 0.0 0.0 40.08630221844717 12.5190243216651 12.5190243216651 9.262137858390815 0 0.805462187404089 0.0 0.0 0.5501648626366046 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L};{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L};{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L};{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L};{[ES]|[DT]|[{I|L}C]}N[{I|L}T]{NN|[MP]|[D{I|L}]|[EV]}{I|L};{[ES]|[DT]|[{I|L}C]}N[{I|L}T]{M(Oxidation (M))|F}{[HG]|PP} 5.6341;4.6089;4.2893;3.2701;1.2074;0.83571 +;-;-;-;-;- + 119 + 1 3.493 37988.4 1.0 333 3126 3460 SUDHL4_400M_050219_1,3461 SUDHL4_400M_050219_1,3461,DTNADKQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3464 15.54 800.0 96309.0 25 0 13610.0 + -1 REAGIITTKM 10 96 568.3107205845181 1134.606888235836 2 568.3093749880791 MULTI CID FTMS 0 0 0 3463 92846.5859375 0.7683865158363025 -7 0.0711021423339843 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENST00000591437.5_1_17:75196686-75199708:+|nuORF 22.736283301280096 0.2418982879461534 5 KTTT[{I|L}P][WP]K 9 -1 59.188 0.0 0.0 5.2166 0.0 0.0 63.99963102147223 0.0 63.99963102147223 0.0 26.3334600561205 0.0 0.0 0 1.1549471895720984 0.0 1.6549471895720984 0.2215141619232908 KTTT[{I|L}P][WP]K 5.2166 - 355 + 1 3.493 65248.0 0.4600000083446502 334 3128 3463 SUDHL4_400M_050219_1,3464 SUDHL4_400M_050219_1,3464,EKKLQNTMK False False REAGIITTKM 15.540314 568.309374988079 5594890.5 3463.0 ENST00000591437.5_1_17:75196686-75199708:+|nuORF 1.902984857559204 2.0 False 10.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3467 15.561 800.0 67928.0 25 0 5340.6 43262 WEYCFSFFWPC 11 92 757.7985646734403 1513.5825764136805 2 757.7972289919853 MULTI CID FTMS 0 0 0 3466 102801.3046875 0.6063158357453446 -3 0.0243568420410156 1 Unmodified _WEYCFSFFWPC_ ENST00000262932.4_1_7:99717344-99717440:+|nuORF 2.9952420565917617 0.861016188266951 5 [SG]NG{M(Oxidation (M))|F}GGGGGGSGYS 15 14 94.884 0.0 0.0 6.2688 0.0 0.0 0.0 312.1015097800316 312.1015097800316 47.737357849954506 0.0 0.0 0.0 0 0.0 0.0 2.700061205686631 0.6382104921644451 [SG]NG{M(Oxidation (M))|F}GGGGGGSGYS 6.2688 - 15546 1 3.493 45699.5 0.4199999868869781 335 3130 3466 SUDHL4_400M_050219_1,3467 SUDHL4_400M_050219_1,3467,WEYCFSFFWPC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3475 15.592 133.0 374570.0 25 0 29472.0 + 24315 MDTPLPPPGRT 11 87 394.5384803695213 1180.593611708764 3 394.5388061404228 MULTI CID FTMS 0 0 0 3474 203146.640625 0.559191177419341 12 -0.1519460678100586 1 Unmodified _MDTPLPPPGRT_ REV__ENSG00000164077|ENST00000296473|MON1A;REV__nc|ENSG00000164077|Q86VX9|MON1A 8.155526934196011 0.8366696279279818 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 22.479 13.456 3.1348 1.904 1.904 52.816 0.0 0.0 0.0 0.0 9.023048140744876 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 1.904 - 104 + 1 3.493 45499.0 1.0 336 3137 3474 SUDHL4_400M_050219_1,3475 SUDHL4_400M_050219_1,3475,MDTPLPPPGRT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3478 15.612 800.0 32359.0 25 0 8569.0 -1 0 31 1189.472444610184 3565.395504430752 3 1189.806811511517 MULTI CID FTMS 0 0 0 3477 49158.08984375 0.165025465214343 -9 0.05120849609375 1 5 A 1 -1 4.6041 0.0 0.0 0.12913 0.0 0.0 2745.845407850478 745.5022677057249 3491.347675556203 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.12913 - 1 + 1 3.493 32831.3 0.3199999928474426 337 3139 3477 SUDHL4_400M_050219_1,3478 SUDHL4_400M_050219_1,3478, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3479 15.625 730.0 135650.0 25 0 17784.0 -1 0 104 455.25200116158015 454.24472469498016 1 455.2517883181572 MULTI CID FTMS 0 0 0 3477 95796.8828125 0.8667468382686723 1 -0.0290679931640625 2 5 Y 1 -1 13.979 0.0 0.0 3.0775 0.0 0.0 273.17087018013484 0.0 273.17087018013484 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.0775 - 26 + 1 3.493 80610.7 1.0 338 3139 3477 SUDHL4_400M_050219_1,3479 SUDHL4_400M_050219_1,3479, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3481 15.634 374.0 217600.0 25 0 27454.0 + -1 KRRWNMMK 8 77 591.3045840402148 1180.5946151472294 2 591.3046752810478 MULTI CID FTMS 0 0 0 3480 224108.484375 0.6078714387695613 18 -0.3047475814819336 1 2 Oxidation (M) _KRRWNM(Oxidation (M))M(Oxidation (M))K_ REV__ENST00000344293.5_1_10:7866412-8006047:+|nuORF 7.910154910731844 0.7763180056447161 5 KT{M(Oxidation (M))|F}T[{I|L}P][WP]K 9 -1 35.186 0.0 0.0 2.9804 0.0 0.0 63.99963359671171 0.0 63.99963359671171 0.0 18.988343711055936 0.0 0.0 0 0.5 0.0 1.305462187404089 0.2059771852360797 KT{M(Oxidation (M))|F}T[{I|L}P][WP]K 2.9804 - 247 + 1 3.493 67395.2 1.0 339 3140 3480 SUDHL4_400M_050219_1,3481 SUDHL4_400M_050219_1,3481,KRRWNMMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3482 15.644 575.0 145090.0 25 0 6683.3 + 12204 GQTGSGKTF 9 127 441.7193581367316 881.4241633402632 2 441.7195922732353 MULTI CID FTMS 0 0 0 3480 109584.5703125 0.5347177461718429 -7 0.0557661056518554 2 Unmodified _GQTGSGKTF_ chr3:44778191-44780885|28|14.18|0.86|4.05|+|1|KIF15,KIF15|1;ENSG00000163808|ENST00000326047|KIF15;ENSG00000164627|ENST00000287152|KIF6;ENSG00000237649|ENST00000428849|KIFC1;ENST00000481166.6_1_3:44803368-44835731:+|nuORF;nc|ENSG00000163808|Q9NS87-2|KIF15;nc|ENSG00000163808|Q9NS87-4|KIF15;nc|ENSG00000164627|Q6ZMV9-3|KIF6 29.84058131909904 0.1515068451768857 5 {[QG]|[NA]}T 3 6 24.309 0.0 0.0 2.7579 0.0 0.0 0.0 592.2736255807507 592.2736255807507 12.715299873086607 0.0 0.0 0.0 0 1.0 0.0 0.0 0.7742275032520141 + {[QG]|[NA]}T 2.7579 + + 219 1 3.493 65994.6 1.0 340 3140 3480 SUDHL4_400M_050219_1,3482 SUDHL4_400M_050219_1,3482,GQTGSGKTF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3485 15.66 505.0 176920.0 25 0 27340.0 + 35487 STMSTNGIPR 10 102 532.2633818466237 1062.5122107600473 2 532.2645141482353 MULTI CID FTMS 0 0 0 3484 102650.0546875 0.1745357043495966 -8 0.075103759765625 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 63.960520009940105 0.0261970246776379 5 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 10 2 + 52.981 0.0 0.0 4.9864 4.9864 78.08 0.0 0.0 0.0 7.269987279362624 0.6829554760228973 0.6829554760228973 0.6829554760228973 0 0.8252574989159953 0.0 0.3807196863200844 0.6307196863200843 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MS[KA]{[DA]|[EG]}RP;{[MG]|[TS]}MS[KA]{[DA]|[EG]}PR;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}RP;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}PR;{[MG]|[TS]}M[{I|L}V][YN][HV];{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}A][KA]S[WD] 4.9864;4.9221;4.1239;4.0596;3.3442;3.2799;3.0924;3.0281;1.0235;0.3279 -;+;-;-;-;-;-;-;-;- + 202 + 1 3.493 73888.9 1.0 341 3142 3484 SUDHL4_400M_050219_1,3485 SUDHL4_400M_050219_1,3485,STMSTNGIPR True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3488 15.68 800.0 124120.0 25 0 13106.0 + 31854 RTGNPTGTY 9 125 483.73570798031074 965.4568630274216 2 483.7354919314384 MULTI CID FTMS 0 0 0 3487 102557.7109375 0.7128988806074303 -4 0.0389137268066406 1 Unmodified _RTGNPTGTY_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62496043-62497015:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5 32.78568957990786 0.1150597335874693 5 {[SA]|[TG]}[RN][TP]GTY 9 2 + 36.568 0.0 0.0 3.7877 3.7877 77.948 0.0 0.0 0.0 0.8671602970766159 13.663385648463825 0.8671602970766159 3.3242236493113 0 1.25 0.7695510786217261 0.5 0.0 {[SA]|[TG]}[RN][TP]GTY;[TP][KG]{[QD]|[EN]|[WG]|[KD]|[RS]}GTY;{[SA]|[TG]}[KP]{[QD]|[EN]|[WG]|[KD]|[RS]}GTY;{[SA]|[TG]}[RN][PG]TTY;[TP][KG]{[WN]|[YH]}TY;[TP]{[HG]|PP}[YK]TY;{[VA]|[{I|L}G]}{[NV]|[RG]}{[QD]|[EN]|[WG]|[KD]|[RS]}GTY;{[SA]|[TG]}[KP]{[WN]|[YH]}TY;[TP][KG]{[QS]|[NT]}WY;{[VA]|[{I|L}G]}{[NV]|[RG]}{[WN]|[YH]}TY 3.7877;3.4433;2.8745;2.8576;2.5663;2.4186;2.382;1.9974;1.9941;1.5049 -;-;-;-;-;-;-;-;-;- 308 1 3.493 81439.3 0.4699999988079071 342 3144 3487 SUDHL4_400M_050219_1,3488 SUDHL4_400M_050219_1,3488,RTGNPTGTY True True RTGNPTGTY 15.679957 483.735491931438 644734.75 3487.0 ENST00000581230.5_1_17:62496043-62497015:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5 4.617285251617432 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3491 15.695 459.0 137080.0 25 0 11693.0 + 32153 RVQEGNESY 9 99 541.2492209726003 1080.4838890120004 2 541.2491943240166 MULTI CID FTMS 0 0 0 3490 165699.21875 0.2212014385169822 13 -0.2493047714233398 1 Unmodified _RVQEGNESY_ ENSG00000105369|ENST00000221972|CD79A 41.95555342248728 0.0647214845423414 5 [RV]QEGNESY 9 0 + 72.583 0.0 0.0 6.7176 6.7176 89.902 0.0 0.0 0.0 12.457547227811446 63.118932666592485 12.457547227811446 8.010299956639813 0 1.0 0.7695510786217261 0.3807196863200844 0.4247425010840047 + + [RV]QEGNESY;[RV]QEGNTDY;[RV]QEGGGESY;[RV][AG]EGNESY;[RV]QEGGGTDY;[RV][AG]EGNTDY;[RV][AG]EGGGESY;{[QD]|[EN]|[WG]|[KD]|[RS]}[R{I|L}]GNESY;{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]KNESY;[RV][AG]EGGGTDY 6.7176;5.9763;5.8654;5.8654;5.124;5.124;5.0172;4.3762;4.3762;4.2758 +;-;-;-;-;-;-;-;-;- + 311 1 3.493 53856.6 1.0 343 3146 3490 SUDHL4_400M_050219_1,3491 SUDHL4_400M_050219_1,3491,RVQEGNESY True True RVQEGNESY 15.694698 541.249194324017 5864863.0 3490.0 ENSG00000105369|ENST00000221972|CD79A 7.6599046389261884 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3492 15.705 572.0 164160.0 25 0 49901.0 + 38236 RAQPRGAVY 9 93 509.2832136648804 1016.5518743965608 2 509.2823364138603 MULTI CID FTMS 0 0 0 3490 96441.9609375 0.5624101513434757 -3 0.0244770050048828 2 Unmodified _TPVASKCRR_ ENST00000585811.1_2_17:40714429-40714513:+|nuORF;nc|ENSG00000068120|Q13057-2|COASY 8.97624648632007 0.6013279508813512 5 [TP]VA{[SA]|[TG]}[{I|L}P]VY 10 5 + 23.931 0.0 0.0 2.3541 2.3541 77.939 0.0 0.0 0.0 5.347040357455839 6.935749724493121 5.347040357455839 6.091896990114233 0 0.3807196863200844 0.0 0.0 0.0 [TP]VA{[SA]|[TG]}[{I|L}P]VY;[TP]V[QT][{I|L}P]VY 2.3541;1.7548 -;- 43 + 1 3.493 80632.0 1.0 344 3146 3490 SUDHL4_400M_050219_1,3492 SUDHL4_400M_050219_1,3492,TPVASKCRR False False RAQPRGAVY 15.704709 509.28233641386 1049382.875 3490.0 ENST00000585811.1_2_17:40714429-40714513:+|nuORF;;nc|ENSG00000068120|Q13057-2|COASY 4.074562788009644 2.0 False 9.0 True non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_1 3493 15.711 344.0 165010.0 25 0 16604.0 33105 SESLPPSSQ 9 82 466.2230460884511 930.4315392437022 2 466.2222473025322 MULTI CID FTMS 0 0 0 3490 100135.1640625 0.3247351685629079 -4 0.0359354019165039 3 Unmodified _SESLPPSSQ_ ENSG00000072364|ENST00000265343|AFF4;nc|ENSG00000072364|Q9UHB7-2|AFF4 25.399314129420983 0.2080152500878129 5 DPS{[QS]|[NT]} 5 5 25.956 0.0 0.0 2.7896 0.0 0.0 398.2158375470719 0.0 398.2158375470719 0.0 9.300150061873108 0.0 0.0 0 0.3252574989159953 0.0 0.5 0.0 DPS{[QS]|[NT]} 2.7896 - 45 1 3.493 51020.9 1.0 345 3146 3490 SUDHL4_400M_050219_1,3493 SUDHL4_400M_050219_1,3493,SESLPPSSQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3496 15.723 303.0 223130.0 25 0 42664.0 + 36126 SVSSLYKY 8 79 473.7468093876144 945.4790658420288 2 473.7454101443291 MULTI CID FTMS 0 0 0 3495 150193.703125 0.7483304170516376 -1 0.0040607452392578 1 Unmodified _SVSSLYKY_ REV__ENSG00000104976|ENST00000221573|SNAPC2 38.15118350030904 0.2652218139009398 5 [VS]QVDAAEK 9 -1 + 86.476 0.0 0.0 9.1463 9.1463 93.708 0.0 0.0 0.0 25.6424927368726 8.92962520169668 8.92962520169668 8.92962520169668 0 0.7742275032520141 2.0 0.5 0.6109243748081782 [VS]QVDAAEK;[VS]QVDAAKE;[VS][AG]VDAAEK;[VS][AG]VDAAKE;[VS]Q{[RE]|[WV]}AEK;[VS]Q{[SA]|[TG]}[TP]EK;[VS]Q{[RE]|[WV]}AKE;[VS][AG]{[RE]|[WV]}AEK;[VS]Q{[SA]|[TG]}[TP]KE;[VS][AG]{[RE]|[WV]}AKE 9.1463;8.2018;8.1724;7.2279;6.7963;5.8995;5.8518;5.8167;4.9551;4.8722 -;-;-;-;-;-;-;-;-;- 311 + 1 3.493 57583.2 1.0 346 3148 3495 SUDHL4_400M_050219_1,3496 SUDHL4_400M_050219_1,3496,SVSSLYKY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3497 15.737 800.0 159580.0 25 0 49752.0 + 35162 SRQFSSRSG 9 103 527.2576590790659 1052.5007652249317 2 527.2572509646416 MULTI CID FTMS 0 0 0 3495 138266.46875 0.6538844333374837 -2 0.0309705734252929 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SRQFSSRSG_ CON__P04264;ENSG00000167768|ENST00000252244|KRT1 68.75988807550267 0.0215783377819135 5 {[RE]|[WV]}Q{M(Oxidation (M))|F}SSR[SG] 9 1 + 76.897 0.0 0.0 7.3061 7.3061 93.048 0.0 0.0 0.0 58.9382634841935 7.147642715192518 7.147642715192518 9.208187539523747 0 2.5114393726401687 0.958607314841775 0.0 0.7302046884880937 {[RE]|[WV]}Q{M(Oxidation (M))|F}SSR[SG];{[RE]|[WV]}[AG]{M(Oxidation (M))|F}SSR[SG];C[KS]{[QN]|[E{I|L}]|[KN]}SSR[SG];{[RE]|[WV]}QQ[TP]S[HA];G{NN|[MP]|[D{I|L}]|[EV]}QQ{[RE]|[WV]}[HA];{[RE]|[WV]}[YN][TA]R[SG];{[RE]|[WV]}[AG]Q[TP]S[HA];{[RE]|[WV]}Q[AG][TP]S[HA];G{NN|[MP]|[D{I|L}]|[EV]}QM[HK]PQ;G{NN|[MP]|[D{I|L}]|[EV]}QM[HK]G[PA] 7.3061;6.4312;3.0117;2.827;2.413;2.3341;1.9521;1.9521;1.9495;1.1797 -;-;-;-;-;-;-;-;-;- 624 + 1 3.493 102462.7 0.5600000023841858 347 3148 3495 SUDHL4_400M_050219_1,3497 SUDHL4_400M_050219_1,3497,SRQFSSRSG True False SRQFSSRSG 15.736892 527.257250964642 668052.8125 3495.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 7.791900475819905 2.0 True 9.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 3499 15.743 162.0 316640.0 25 0 41270.0 -1 TQIRAELMK 9 75 553.3053681274408 1104.5961833216816 2 553.3054687380791 MULTI CID FTMS 0 0 0 3498 250609.625 0.8329871515794125 1 -0.0314617156982421 1 Oxidation (M) _TQIRAELM(Oxidation (M))K_ ENSG00000229571|ENST00000619661|PRAMEF25;ENSG00000280267|ENST00000624207|PRAMEF26 21.53697664764585 0.2571576504437394 5 T[{I|L}P]T{M(Oxidation (M))|F}Q 6 -1 32.096 0.0 0.0 2.9056 0.0 0.0 399.22496230293126 0.0 399.22496230293126 0.0 15.814243664528576 0.0 0.0 0 1.6677353201839438 0.0 0.4247425010840047 0.0 T[{I|L}P]T{M(Oxidation (M))|F}Q 2.9056 - 193 1 3.493 46938.2 1.0 348 3149 3498 SUDHL4_400M_050219_1,3499 SUDHL4_400M_050219_1,3499,TQIRAELMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3500 15.75 403.0 197090.0 25 0 13870.0 + 31367 RNLDHVYNR 9 102 396.2073613207738 1185.6002545625215 3 396.5410949587822 MULTI CID FTMS 0 0 0 3498 55338.2265625 0.5793825083288414 1 -0.0314617156982421 2 Unmodified _RNLDHVYNR_ ENSG00000104894|ENST00000323906|CD37;ENST00000391859.6_1_19:49841166-49843582:+|nuORF;nc|ENSG00000104894|P11049-2|CD37 49.93300154707207 0.0405168250806675 5 HVYNR 5 4 46.459 0.0 0.0 3.9186 0.0 0.0 498.256823021309 0.0 498.256823021309 0.0 35.86280260260958 0.0 0.0 0 1.0 0.0 0.0 1.079689690656103 + HVYNR 3.9186 + + 74 + 1 3.493 68974.8 1.0 349 3149 3498 SUDHL4_400M_050219_1,3500 SUDHL4_400M_050219_1,3500,RNLDHVYNR True True RNLDHVYNR 15.749861 396.2071 400601.46875 3498.0 nc|ENSG00000104894|P11049-2|CD37;;ENSG00000104894|ENST00000323906|CD37;;ENST00000391859.6_1_19:49841166-49843582:+|nuORF 8.46025021870931 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3501 15.758 487.0 128310.0 25 0 10118.0 + 35547 STPTSFNLRP 10 87 560.2952202610547 1118.5758875889094 2 560.2949706912041 MULTI CID FTMS 0 0 0 3498 160304.78125 0.7641235222696128 -3 0.0529155731201171 3 Unmodified _STPTSFNLRP_ REV__ENSG00000178921|ENST00000314666|PFAS 20.453626601364224 0.5043500229302764 5 MSTNG{I|L}RP 8 -1 46.675 0.0 0.0 4.1727 0.0 0.0 244.1429232759872 0.0 244.1429232759872 0.0 33.91104993883733 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.7302046884880937 MSTNG{I|L}RP 4.1727 - 287 + 1 3.493 53468.5 1.0 350 3149 3498 SUDHL4_400M_050219_1,3501 SUDHL4_400M_050219_1,3501,STPTSFNLRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3502 15.768 565.0 116540.0 25 0 8214.9 -1 MKPKMKYSTN 10 101 630.3094898998202 1258.6044268664402 2 630.3083984255791 MULTI CID FTMS 0 0 0 3498 120435.53125 0.7944752352723086 -3 0.0529155731201171 4 2 Oxidation (M) _M(Oxidation (M))KPKM(Oxidation (M))KYSTN_ ENSG00000137033|ENST00000682010|IL33;ENST00000463336.1_1_9:6241694-6242202:+|nuORF;nc|ENSG00000137033|O95760-2|IL33;nc|ENSG00000137033|O95760-3|IL33;nc|ENSG00000137033|O95760-4|IL33 47.594388314883695 0.0942698883389255 5 DPSQSTN 7 -1 69.428 0.0 0.0 5.5163 0.0 0.0 511.2997303693375 0.0 511.2997303693375 0.0 43.24236926128778 0.0 0.0 0 0.9247425010840048 0.0 2.089136830878453 0.3494850021680094 DPSQSTN 5.5163 - 665 1 3.493 54619.0 1.0 351 3149 3498 SUDHL4_400M_050219_1,3502 SUDHL4_400M_050219_1,3502,MKPKMKYSTN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3504 15.776 184.0 347300.0 25 0 51703.0 + -1 IQRLETMK 8 74 517.78680955543 1033.5590661776598 2 517.7868530154228 MULTI CID FTMS 0 0 0 3503 317239.90625 0.0711792747739803 38 -0.4345674514770508 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 5 T{M(Oxidation (M))|F}K 3 -1 43.5 0.0 0.0 4.2088 0.0 0.0 639.37106903228 0.0 639.37106903228 0.0 27.18765315847925 0.0 0.0 0 1.305462187404089 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 4.2088 + + 140 1 3.513 54605.5 1.0 352 3150 3503 SUDHL4_400M_050219_1,3504 SUDHL4_400M_050219_1,3504,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3506 15.792 800.0 116480.0 25 0 6555.6 + 6228 DTNADKQL 8 134 452.72192119111 903.42928944902 2 452.7218505740166 MULTI CID FTMS 0 0 0 3505 100519.2109375 0.5042602316378969 3 -0.0587530136108398 1 Unmodified _DTNADKQL_ ENSG00000163220|ENST00000368738|S100A9 81.89019881105858 0.0835893570953205 5 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L} 8 0 + 63.699 0.0 0.0 7.0508 7.0508 93.444 0.0 0.0 0.0 50.20455512309964 15.344406447039065 15.344406447039065 9.262137858390815 0 1.048455006504028 0.8239087409443188 0.0 1.337180496500464 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L};{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L};{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L};{[ES]|[DT]|[{I|L}C]}NAD[Q{I|L}]K;{[ES]|[DT]|[{I|L}C]}GGADK[AG]{I|L};{[ES]|[DT]|[{I|L}C]}GGAD[Q{I|L}]K;{[ES]|[DT]|[{I|L}C]}N[WR]{[NV]|[RG]};{[ES]|[DT]|[{I|L}C]}GG[WR]{[NV]|[RG]} 7.0508;6.0256;5.6388;4.7834;4.6195;3.7582;2.1402;1.1074 +;-;-;-;-;-;-;- + 263 + 1 3.513 75534.1 0.5400000214576721 353 3151 3505 SUDHL4_400M_050219_1,3506 SUDHL4_400M_050219_1,3506,DTNADKQL True True DTNADKQL 15.792196 452.721850574017 2393211.5 3505.0 ENSG00000163220|ENST00000368738|S100A9 4.839812596638997 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3507 15.806 800.0 65899.0 25 0 7672.8 43745 YDYYRDDFYDR 11 69 795.8304896550978 1589.6464263769956 2 795.8314086794853 MULTI CID FTMS 0 0 0 3505 108892.6171875 1.0 0 0.0 2 Unmodified _YDYYRDDFYDR_ ENSG00000125970|ENST00000246194|RALY 3.2813086475875832 0.8596665074481906 5 GGGGGSGYSG[HC] 12 12 80.756 0.0 0.0 5.0801 0.0 0.0 595.270799705275 0.0 595.270799705275 0.0 35.75765943524473 0.0 0.0 0 1.2614393726401687 0.0 0.3807196863200844 0.0 GGGGGSGYSG[HC] 5.0801 - 3746 1 3.513 44760.7 0.4399999976158142 354 3151 3505 SUDHL4_400M_050219_1,3507 SUDHL4_400M_050219_1,3507,YDYYRDDFYDR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3509 15.822 800.0 143430.0 25 0 18939.0 -1 EKKLQNTMK 9 100 568.3108448935028 1134.6071368538055 2 568.3102905154228 MULTI CID FTMS 0 0 0 3508 169904.34375 0.293670230935311 -72 0.6023244857788086 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 32.78568957990786 0.1150597335874693 5 NT{M(Oxidation (M))|F}K 4 -1 43.646 0.0 0.0 3.8468 0.0 0.0 626.3884306543899 0.0 626.3884306543899 0.0 19.450170277982096 0.0 0.0 0 1.3807196863200843 0.0 0.3054621874040891 0.3252574989159953 NT{M(Oxidation (M))|F}K 3.8468 + + 418 + 1 3.513 93938.7 0.4900000095367431 355 3152 3508 SUDHL4_400M_050219_1,3509 SUDHL4_400M_050219_1,3509,EKKLQNTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3510 15.831 457.0 214400.0 25 0 26645.0 42423 VTEMYQFKF 9 132 398.1954151786083 1191.5644161360249 3 398.1956054568291 MULTI CID FTMS 0 0 0 3508 141419.78125 0.7519972548495027 -2 0.0376462936401367 2 Unmodified _VTEMYQFKF_ ENSG00000176635|ENST00000336726|HORMAD2 19.256988751693697 0.3154191944385105 5 VTEREQ 6 5 67.276 0.0 0.0 5.646 0.0 0.0 0.0 446.18222986392817 446.18222986392817 55.682296357280094 0.0 0.0 0.0 0 0.484825539911597 1.6989700043360187 0.3494850021680094 0.3807196863200844 VTEREQ 5.646 - 101 + 1 3.513 80192.6 1.0 356 3152 3508 SUDHL4_400M_050219_1,3510 SUDHL4_400M_050219_1,3510,VTEMYQFKF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3513 15.845 352.0 193690.0 25 0 31170.0 + 31942 RVDKNAPTV 9 93 500.2834766231679 998.5524003131358 2 500.2843505740166 MULTI CID FTMS 0 0 0 3512 130495.6484375 0.3787555967177774 -5 0.0976600646972656 1 Unmodified _RVDKNAPTV_ ENSG00000102879|ENST00000219150|CORO1A;ENST00000568982.5_1_16:30195026-30198313:+|nuORF;ENST00000569469.1_1_16:30195026-30198371:+|nuORF 41.95555342248728 0.0647214845423414 5 V{M(Oxidation (M))|F}PR[PS]TVP 9 6 + 60.287 0.0 0.0 6.0375 6.0375 81.081 0.0 0.0 0.0 17.050143450894808 0.571968632008435 0.571968632008435 0.571968632008435 0 0.718765315847925 1.6989700043360187 0.7742275032520141 0.3807196863200844 V{M(Oxidation (M))|F}PR[PS]TVP;V{M(Oxidation (M))|F}PR[PS]P{[TV]|[{I|L}S]};V{[WT]|[RM]}{I|L}[PS]P{[TV]|[{I|L}S]};[{I|L}T]TA[RH]T{[TV]|[{I|L}S]};[{I|L}T]TA{[HG]|PP}[R{M(Oxidation (M))|F}]P 6.0375;5.9802;4.4039;2.5746;1.0128 -;-;-;-;- 272 + 1 3.513 56188.5 1.0 357 3154 3512 SUDHL4_400M_050219_1,3513 SUDHL4_400M_050219_1,3513,RVDKNAPTV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3514 15.859 800.0 197310.0 25 0 23976.0 + 38871 TVKDSRTVY 9 102 534.787978586594 1067.561404239988 2 534.7881957888603 MULTI CID FTMS 0 0 0 3512 168135.9375 0.3787129847096484 -6 0.1196050643920898 2 Unmodified _TVKDSRTVY_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 46.0223103267499 0.0490911897871712 5 TVKDS 5 4 66.938 0.0 0.0 6.2702 0.0 0.0 0.0 534.2697237604124 534.2697237604124 35.02574989159953 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.4247425010840047 + TVKDS 6.2702 + + 211 + 1 3.513 123324.0 0.6299999952316284 358 3154 3512 SUDHL4_400M_050219_1,3514 SUDHL4_400M_050219_1,3514,TVKDSRTVY True True TVKDSRTVY 15.858639 534.78819578886 4413698.0 3512.0 nc|ENSG00000166226|P78371-2|CCT2;;ENSG00000166226|ENST00000299300|CCT2 6.057639916737874 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3516 15.866 274.0 195830.0 25 0 18604.0 + -1 WRHMCCRLWYN 11 70 820.8559294999335 1639.697306066667 2 820.8557617068291 MULTI CID FTMS 0 0 0 3515 214948.546875 0.2775289483968746 -15 0.2339487075805664 1 Carbamidomethyl (C),Oxidation (M) _WRHM(Oxidation (M))C(Carbamidomethyl (C))CRLWYN_ REV__ENSG00000146221|ENST00000371505|TCTE1 0.0 0.8751479354844584 5 {[CP]|[EA]}PEQGAA[EP]AEQGQE 16 -1 + 80.517 0.0 0.0 4.9105 4.9105 78.454 0.0 0.0 0.0 1.249387366082999 4.323033561788989 1.249387366082999 1.249387366082999 0 1.6435078169319297 0.0 1.1307196863200843 0.8494850021680094 {[CP]|[EA]}PEQGAA[EP]AEQGQE;[EP]AEQGAA[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QNAE;{[CP]|[EA]}PEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QGGAE;{[CP]|[EA]}PPNS{[SA]|[TG]}[EP]AEQGQE;[EP]AEQ[QA][EP]AEQGQE;[EP]APNS{[SA]|[TG]}[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QGGAE 4.9105;4.8343;4.6468;4.5115;4.5013;4.4686;4.4619;4.4251;4.3857;4.3333 -;-;-;-;-;-;-;-;-;- 3131 1 3.513 42320.8 1.0 359 3155 3515 SUDHL4_400M_050219_1,3516 SUDHL4_400M_050219_1,3516,WRHMCCRLWYN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3517 15.877 620.0 154450.0 25 0 12727.0 31470 RPSQERGQSQG 11 103 615.3044975795129 1228.5944422258258 2 615.3036987185478 MULTI CID FTMS 0 0 0 3515 193014.40625 0.3078366183401907 -9 0.1746177673339843 2 Unmodified _RPSQERGQSQG_ ENST00000338779.10_1_16:70697408-70697537:-|nuORF 35.61225514009592 0.279986979807413 5 DP[WK]PSQSAN 10 8 77.433 0.0 0.0 6.3026 0.0 0.0 100.06406600166171 0.0 100.06406600166171 0.0 44.043519297756994 0.0 0.0 0 1.305462187404089 0.0 2.853917193908117 0.0 DP[WK]PSQSAN 6.3026 - 2402 1 3.513 74677.4 1.0 360 3155 3515 SUDHL4_400M_050219_1,3517 SUDHL4_400M_050219_1,3517,RPSQERGQSQG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3518 15.891 800.0 84985.0 25 0 25530.0 -1 0 34 1189.472444610184 3565.395504430752 3 1190.138598620892 MULTI CID FTMS 0 0 0 3515 249484.15625 0.7338866084214424 4 -0.0746870040893554 3 5 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.30765 0.0 0.0 1999.7069801161024 1358.5891606150574 3358.29614073116 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.30765 - 4 + 1 3.513 63048.9 0.5899999737739563 361 3155 3515 SUDHL4_400M_050219_1,3518 SUDHL4_400M_050219_1,3518, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3520 15.905 669.0 123380.0 25 0 6306.5 + 12205 GQTGSGKTF 9 121 441.7193581367316 881.4241633402632 2 441.7195007205009 MULTI CID FTMS 0 0 0 3519 66762.140625 0.3257657648591022 9 -0.1052055358886718 1 Unmodified _GQTGSGKTF_ chr3:44778191-44780885|28|14.18|0.86|4.05|+|1|KIF15,KIF15|1;ENSG00000163808|ENST00000326047|KIF15;ENSG00000164627|ENST00000287152|KIF6;ENSG00000237649|ENST00000428849|KIFC1;ENST00000481166.6_1_3:44803368-44835731:+|nuORF;nc|ENSG00000163808|Q9NS87-2|KIF15;nc|ENSG00000163808|Q9NS87-4|KIF15;nc|ENSG00000164627|Q6ZMV9-3|KIF6 20.41453444215458 0.284085796332423 5 {[QG]|[NA]}TGP 5 5 21.706 0.0 0.0 2.4626 0.0 0.0 0.0 438.1941622369751 438.1941622369751 6.221061908272823 0.0 0.0 0.0 0 0.6643943297944485 0.0 0.0 0.0 {[QG]|[NA]}TGP 2.4626 - 130 + 1 3.513 67519.6 1.0 362 3156 3519 SUDHL4_400M_050219_1,3520 SUDHL4_400M_050219_1,3520,GQTGSGKTF False True GQTGSGKTF 15.905124 441.719500720501 2324862.25 3519.0 ENSG00000164627|ENST00000287152|KIF6;;ENSG00000163808|ENST00000326047|KIF15;;ENSG00000237649|ENST00000428849|KIFC1;;chr3:44778191-44780885|28|14.18|0.86|4.05|+|1|KIF15,KIF15|1;;ENST00000481166.6_1_3:44803368-44835731:+|nuORF;;nc|ENSG00000163808|Q9NS87-4|KIF15;;nc|ENSG00000163808|Q9NS87-2|KIF15;;nc|ENSG00000164627|Q6ZMV9-3|KIF6 4.908282438913981 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3521 15.919 800.0 99665.0 25 0 5785.1 + -1 STCLRMWQGQ 10 102 633.7894829941531 1265.564413055106 2 633.7889892458916 MULTI CID FTMS 0 0 0 3519 122400.65625 0.6171231859065752 -5 0.1151180267333984 2 Carbamidomethyl (C) _STC(Carbamidomethyl (C))LRMWQGQ_ REV__ENSG00000010256|ENST00000203407|UQCRC1;REV__ENST00000415995.5_1_3:48636563-48647036:-|nuORF;REV__ENST00000471189.5_1_3:48636563-48638429:-|nuORF;REV__ENST00000480561.5_1_3:48636882-48638270:-|nuORF 29.081581746732265 0.3152867722954398 5 DQQ[WK]EC(Carbamidomethyl (C)){[QG]|[NA]} 9 -1 40.978 0.0 0.0 3.2379 0.0 0.0 88.06461914351014 0.0 88.06461914351014 0.0 4.158460499930996 0.0 0.0 0 0.3054621874040891 0.0 0.3252574989159953 1.579689690656103 DQQ[WK]EC(Carbamidomethyl (C)){[QG]|[NA]} 3.2379 - 2906 + 1 3.513 63093.2 0.5099999904632568 363 3156 3519 SUDHL4_400M_050219_1,3521 SUDHL4_400M_050219_1,3521,STCLRMWQGQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3523 15.929 366.0 187570.0 25 0 24641.0 + 35488 STMSTNGIPR 10 90 532.2633818466237 1062.5122107600473 2 532.2634155154228 MULTI CID FTMS 0 0 0 3522 132075.109375 0.2245670721948745 7 -0.0608196258544921 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 47.594388314883695 0.0942698883389255 5 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 10 2 + 48.205 0.0 0.0 4.5369 4.5369 82.005 0.0 0.0 0.0 7.269987279362624 5.314789170422557 5.314789170422557 5.314789170422557 0 0.7742275032520141 0.0 0.0 0.3807196863200844 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}RP;{[MG]|[TS]}MST[YV]{M(Oxidation (M))|F}K;{[MG]|[TS]}M{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}PR;{[MG]|[TS]}MS[{I|L}P]{[WN]|[YH]}K;{[MG]|[TS]}M[{I|L}V][YN][HV] 4.5369;4.0367;3.6743;3.1741;2.5584;2.099;2.0582;1.1579;0.97546 -;+;-;-;-;-;-;-;- + 162 + 1 3.513 60326.9 1.0 364 3157 3522 SUDHL4_400M_050219_1,3523 SUDHL4_400M_050219_1,3523,STMSTNGIPR True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3528 15.958 800.0 106920.0 25 0 11416.0 + 44221 YLHDQNPDA 9 110 536.7383411775634 1071.4621294219266 2 536.7386962771416 MULTI CID FTMS 0 0 0 3527 77295.296875 0.6005629284614428 -7 0.1068449020385742 1 Unmodified _YLHDQNPDA_ ENSG00000105669|ENST00000262812|COPE;ENST00000597026.5_1_19:19017767-19023834:-|nuORF;nc|ENSG00000105669|O14579-3|COPE 25.399314129420983 0.2080152500878129 5 [DP]VV[MD]N[WP] 9 7 + 23.713 0.0 0.0 2.2132 2.2132 83.941 0.0 0.0 0.0 1.4948477134773483 0.4125791248291008 0.4125791248291008 23.71333520964091 0 0.4247425010840047 1.5228787452803376 0.0 0.4247425010840047 [DP]VV[MD]N[WP] 2.2132 - 152 1 3.513 72828.8 0.4300000071525574 365 3161 3527 SUDHL4_400M_050219_1,3528 SUDHL4_400M_050219_1,3528,YLHDQNPDA False True YLHDQNPDA 15.957814 536.738696277142 503891.71875 3527.0 ENST00000597026.5_1_19:19017767-19023834:-|nuORF;;nc|ENSG00000105669|O14579-3|COPE;;ENSG00000105669|ENST00000262812|COPE 5.030024925867717 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3529 15.972 800.0 46284.0 25 0 4053.1 -1 MLRYPYFCRMY 11 70 829.3692145834478 1656.7238762336956 2 829.3696777224541 MULTI CID FTMS 0 0 0 3527 84213.4921875 0.9287600047181886 -11 0.1730432510375976 2 Acetyl (Protein N-term),Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))LRYPYFC(Carbamidomethyl (C))RMY_ ENSG00000169519|ENST00000407364|METTL15;nc|ENSG00000169519|A6NJ78-2|METTL15;nc|ENSG00000169519|A6NJ78-3|METTL15;nc|ENSG00000169519|A6NJ78-4|METTL15;nc|ENSG00000174912|P0C7V9|METTL15P1 0.0 0.8751479354844584 5 [WY]QEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE 13 -1 + 72.282 0.0 0.0 4.3629 4.3629 77.754 0.0 0.0 0.0 48.78209153429903 22.742275032520133 22.742275032520133 1.783127190496387 0 0.0 0.0 2.2302046884880937 0.3494850021680094 [WY]QEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;[WY]QEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QGGAE;[WY]QE[WE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;[WY]QE[WE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QGGAE;[WY]QEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QANE;[WY]QEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QGQE;[WY]QE[WE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QANE;[WY]QE[WE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QGQE;{[QG]|[NA]}EQ[RH]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AEQGHH;[AG]GEQ[RH]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AEQGHH 4.3629;4.2553;3.962;3.8528;3.7447;3.6565;3.3438;3.2556;2.8929;2.7867 -;-;-;-;-;-;-;-;-;- 849 + 1 3.513 34148.7 0.3799999952316284 366 3161 3527 SUDHL4_400M_050219_1,3529 SUDHL4_400M_050219_1,3529,MLRYPYFCRMY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3533 15.996 800.0 145930.0 25 0 20936.0 + 39100 TWIMMKRP 8 124 531.7844562395233 1061.5543595458464 2 531.7841674685478 MULTI CID FTMS 0 0 0 3532 61288.30859375 0.1984317978612507 -14 0.2113838195800781 1 Unmodified _TWIMMKRP_ REV__ENST00000464842.1_1_22:38965306-38965369:-|nuORF 26.34127834903884 0.4900704351052977 5 KTE[{I|L}P]TGRP 9 -1 37.845 0.0 0.0 3.5651 0.0 0.0 63.998899813783005 0.0 63.998899813783005 0.0 21.46902856391783 0.0 0.0 0 0.3807196863200844 0.0 1.024227503252014 0.3494850021680094 KTE[{I|L}P]TGRP 3.5651 - 1049 + 1 3.513 94064.9 0.4799999892711639 367 3164 3532 SUDHL4_400M_050219_1,3533 SUDHL4_400M_050219_1,3533,TWIMMKRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3535 16.003 203.0 261240.0 25 0 33788.0 + -1 VQIAWLTMK 9 74 553.3054088054388 1104.5962646776777 2 553.3053466677666 MULTI CID FTMS 0 0 0 3534 183369.015625 0.6303407356385207 -27 0.4046039581298828 1 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 18.1463463914782 0.3454829746528889 5 T{M(Oxidation (M))|F}K 3 -1 31.605 0.0 0.0 2.8612 0.0 0.0 710.4087169255275 0.0 710.4087169255275 0.0 21.656205609827246 0.0 0.0 0 1.0 0.0 0.0 0.2396518287104437 T{M(Oxidation (M))|F}K 2.8612 + + 118 + 1 3.513 47528.3 1.0 368 3165 3534 SUDHL4_400M_050219_1,3535 SUDHL4_400M_050219_1,3535,VQIAWLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3536 16.016 800.0 172390.0 25 0 9180.5 + 768 AERQVAQEEK 10 139 396.5401986714956 1186.5987666146868 3 396.8742553591728 MULTI CID FTMS 0 0 0 3534 67254.5703125 0.570601919592355 1 -0.0202350616455078 2 Unmodified _AERQVAQEEK_ REV__ENST00000474528.5_1_2:73170533-73170719:-|nuORF 20.871137199558856 0.4973446006067743 5 HVDAAEK 7 -1 52.713 0.0 0.0 4.4423 0.0 0.0 418.2216130289041 0.0 418.2216130289041 0.0 35.43234978933588 0.0 0.0 0 2.036150500836482 0.0 0.0 0.0 HVDAAEK 4.4423 - 128 1 3.513 115028.4 0.959999978542328 369 3165 3534 SUDHL4_400M_050219_1,3536 SUDHL4_400M_050219_1,3536,AERQVAQEEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3540 16.031 214.0 338870.0 25 0 47085.0 + -1 TLIHIYMK 8 89 517.7871155397747 1033.5596781463494 2 517.7871581912041 MULTI CID FTMS 0 0 0 3539 282332.625 0.2196841228770042 -41 0.5042953491210938 1 Oxidation (M) _TLIHIYM(Oxidation (M))K_ REV__ENSG00000066279|ENST00000367409|ASPM 23.1484247019978 0.5573009939494978 5 T{M(Oxidation (M))|F}K 3 -1 39.693 0.0 0.0 3.8404 0.0 0.0 639.3691405142513 0.0 639.3691405142513 0.0 18.222192947339195 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.8404 - 120 1 3.513 60489.8 1.0 370 3168 3539 SUDHL4_400M_050219_1,3540 SUDHL4_400M_050219_1,3540,TLIHIYMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3546 16.064 800.0 106130.0 25 0 6956.6 11712 GLGTAKNK 8 141 394.7351210820792 787.4556892309583 2 394.7347289919853 MULTI CID FTMS 0 0 0 3545 87368.265625 0.9011520954005549 1 -0.0163822174072265 1 Unmodified _GLGTAKNK_ ENST00000531958.5_1_11:67183879-67184254:+|nuORF 28.486842064014134 0.4448922141344407 5 SNK 3 6 29.319 0.0 0.0 3.7232 0.0 0.0 440.2745838849625 0.0 440.2745838849625 0.0 19.23012235029251 0.0 0.0 0 0.6861818737241735 0.0 0.3494850021680094 0.0 SNK 3.7232 - 139 1 3.513 67469.9 0.8199999928474426 371 3173 3545 SUDHL4_400M_050219_1,3546 SUDHL4_400M_050219_1,3546,GLGTAKNK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3548 16.08 800.0 140880.0 25 0 17606.0 -1 EKKLQNTMK 9 109 568.3108448935028 1134.6071368538055 2 568.3107787966728 MULTI CID FTMS 0 0 0 3547 119910.8359375 0.2072592265988597 -50 0.5622234344482422 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 5 KTT[{I|L}P]T[WP]K 9 -1 56.115 0.0 0.0 4.9457 0.0 0.0 63.99976396900531 0.0 63.99976396900531 0.0 40.6080915149993 0.0 0.0 0 1.805462187404089 0.0 1.6382104921644451 0.5356668758921829 KTT[{I|L}P]T[WP]K 4.9457 - 315 + 1 3.513 88263.0 0.5199999809265137 372 3174 3547 SUDHL4_400M_050219_1,3548 SUDHL4_400M_050219_1,3548,EKKLQNTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3551 16.1 693.0 106180.0 25 0 18827.0 + -1 WCVAPRYPRW 10 86 464.2318021201343 1389.673576960603 3 464.2315551638603 MULTI CID FTMS 0 0 0 3550 83852.828125 0.9569447345786712 -2 0.020263671875 1 Carbamidomethyl (C) _WC(Carbamidomethyl (C))VAPRYPRW_ REV__ENST00000521330.6_1_17:78397332-78402276:+|nuORF 3.876331618118854 0.7087061897849828 5 W 1 -1 15.485 0.0 0.0 1.1143 0.0 0.0 1185.5832734711482 0.0 1185.5832734711482 0.0 2.17352101606476 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.1143 + + 59 + 1 3.513 59735.0 1.0 373 3176 3550 SUDHL4_400M_050219_1,3551 SUDHL4_400M_050219_1,3551,WCVAPRYPRW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3553 16.114 699.0 123890.0 25 0 12837.0 + 38872 TVKDSRTVY 9 88 534.787978586594 1067.561404239988 2 534.7880737185478 MULTI CID FTMS 0 0 0 3552 113163.2734375 0.2548913794412911 17 -0.166656494140625 1 Unmodified _TVKDSRTVY_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 34.93206674587334 0.1032771302489716 5 TVKD[R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}] 8 4 + 69.385 0.0 0.0 6.4994 6.4994 95.389 0.0 0.0 0.0 53.90092514408778 0.4575749056067479 0.4575749056067479 69.38547520912806 0 0.9247425010840048 2.0 0.3494850021680094 0.4247425010840047 TVKD[R{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}] 6.4994 - 62 + 1 3.513 71270.9 1.0 374 3177 3552 SUDHL4_400M_050219_1,3553 SUDHL4_400M_050219_1,3553,TVKDSRTVY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3554 16.128 800.0 146190.0 25 0 15251.0 + 18160 KTQRSPAL 8 118 450.76686208447455 899.5191712357491 2 450.7665893435478 MULTI CID FTMS 0 0 0 3552 103313.7421875 0.4890575430079961 -14 0.1240367889404296 2 Unmodified _KTQRSPAL_ REV__ENST00000569105.5_1_11:69468929-69488043:-|nuORF 14.838274106304384 0.6917062315640577 5 KT 2 -1 29.024 0.0 0.0 3.2266 0.0 0.0 0.0 667.3533955546427 667.3533955546427 13.251231124756572 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 KT 3.2266 + + 59 + 1 3.513 95274.9 0.449999988079071 375 3177 3552 SUDHL4_400M_050219_1,3554 SUDHL4_400M_050219_1,3554,KTQRSPAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3556 16.133 94.0 435010.0 25 0 33979.0 + -1 WRHMCCRLWYN 11 60 820.8559294999335 1639.697306066667 2 820.8555786013603 MULTI CID FTMS 0 0 0 3555 527334.6875 0.6808635992323196 8 -0.0665340423583984 1 Carbamidomethyl (C),Oxidation (M) _WRHM(Oxidation (M))C(Carbamidomethyl (C))CRLWYN_ REV__ENSG00000146221|ENST00000371505|TCTE1 0.0 0.8751479354844584 5 [EP]AEQ[QA][EP]AEQGQE 15 -1 + 71.422 0.0 0.0 4.3558 4.3558 76.241 0.0 0.0 0.0 0.7731363626805461 0.7731363626805461 0.7731363626805461 0.7731363626805461 0 1.960409376976188 0.0 0.7742275032520141 0.3494850021680094 [EP]AEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GKEA[EP]YWWAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA[EP]YWWAE;{[CP]|[EA]}PEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GKEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GKEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QGGAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[QD]|[EN]|[WG]|[KD]|[RS]}[{M(Oxidation (M))|F}E]QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GKEA{[QD]|[EN]|[WG]|[KD]|[RS]}[{M(Oxidation (M))|F}E]QNAE 4.3558;4.3087;4.3087;4.2796;3.9817;3.9817;3.8244;3.8244;3.7981;3.7981 -;-;-;-;-;-;-;-;-;- 2430 1 3.513 36700.4 1.0 376 3178 3555 SUDHL4_400M_050219_1,3556 SUDHL4_400M_050219_1,3556,WRHMCCRLWYN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3557 16.147 800.0 91303.0 25 0 7649.9 + 10408 FSYIDLLSSAN 11 99 615.3044975795129 1228.5944422258258 2 615.3042480349541 MULTI CID FTMS 0 0 0 3555 170641.953125 0.2721550314173263 14 -0.1099624633789062 2 Unmodified _FSYIDLLSSAN_ REV__ENSG00000166197|ENST00000605788|NOLC1;REV__nc|ENSG00000166197|Q14978-2|NOLC1;REV__nc|ENSG00000166197|Q14978-3|NOLC1 34.93206674587334 0.2904649469012649 5 DP[WK]PSQSAN 10 -1 70.795 0.0 0.0 5.7623 0.0 0.0 100.06417281318517 0.0 100.06417281318517 0.0 53.80510344348764 0.0 0.0 0 1.0 0.0 2.504432191740108 0.0 DP[WK]PSQSAN 5.7623 - 460 1 3.513 63892.3 0.75 377 3178 3555 SUDHL4_400M_050219_1,3557 SUDHL4_400M_050219_1,3557,FSYIDLLSSAN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3560 16.167 800.0 151000.0 25 0 41144.0 33824 SLDTQPKKV 9 125 508.29373272912864 1014.5729125250572 2 508.2950317263603 MULTI CID FTMS 0 0 0 3559 101729.90625 0.3342817473532256 -16 0.1712026596069336 1 Unmodified _SLDTQPKKV_ ENSG00000071564|ENST00000262965|TCF3;nc|ENSG00000071564|P15923-2|TCF3;nc|ENSG00000071564|P15923-3|TCF3 21.53697664764585 0.2571576504437394 5 {[TV]|[{I|L}S]}D[RN]YT 7 6 47.993 0.0 0.0 4.7304 0.0 0.0 0.0 162.16486744132604 162.16486744132604 28.128100565428724 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.079689690656103 0.0 {[TV]|[{I|L}S]}D[RN]YT 4.7304 - 854 1 3.513 93697.1 0.8999999761581421 378 3180 3559 SUDHL4_400M_050219_1,3560 SUDHL4_400M_050219_1,3560,SLDTQPKKV False True KDVDGAYMT 16.167337 508.29503172636 494560.09375 3559.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 4.423437595367432 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3561 16.175 409.0 160130.0 25 0 20257.0 6738 EDLSHPGA 8 99 413.19109593388976 824.3676389345795 2 413.1909362673759 MULTI CID FTMS 0 0 0 3559 97579.46875 0.9146564761619932 -8 0.1078357696533203 2 Unmodified _EDLSHPGA_ ENST00000425673.5_1_19:39903285-39903747:+|nuORF 5.760428011301431 0.7893668129297577 5 [EP][HK]DEA 7 5 + 13.837 0.0 0.0 1.6785 1.6785 71.287 0.0 0.0 0.0 0.3423031250545616 -6.250457687067668 -6.250457687067668 0.5102999566398125 0 0.1150219788552205 1.5228787452803376 0.0 0.0 [EP][HK]DEA;[EP]W{[HG]|PP}EA 1.6785;1.6166 -;- 63 1 3.513 56237.3 1.0 379 3180 3559 SUDHL4_400M_050219_1,3561 SUDHL4_400M_050219_1,3561,EDLSHPGA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3570 16.214 476.0 184120.0 25 0 50642.0 + 40153 VGNAQGPLPS 10 81 470.2499271801288 938.4853014270576 2 470.2495300173759 MULTI CID FTMS 0 0 0 3569 122806.953125 0.9403212406866904 -2 0.0081405639648437 1 Unmodified _VGNAQGPLPS_ REV__ENSG00000158109|ENST00000378344|TPRG1L;REV__nc|ENSG00000158109|Q5T0D9-2|TPRG1L 6.2057823575117 0.6979311171683138 5 P 1 -1 10.278 0.0 0.0 1.0951 0.0 0.0 823.4215940069388 0.0 823.4215940069388 0.0 3.287886595888967 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.0951 + + 22 + 1 3.513 74199.3 1.0 380 3188 3569 SUDHL4_400M_050219_1,3570 SUDHL4_400M_050219_1,3570,VGNAQGPLPS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3574 16.238 800.0 86223.0 25 0 12787.0 + 39675 VEEKDPQSTN 10 104 573.7673806476197 1145.5202083620393 2 573.7670776247978 MULTI CID FTMS 0 0 0 3573 42078.61328125 0.5010963798299977 1 -0.0163707733154296 1 Unmodified _VEEKDPQSTN_ REV__nc|ENSG00000105429|Q7Z7M0-2|MEGF8 45.739877483867886 0.1051543674217965 5 GPSQSTN 7 -1 57.472 0.0 0.0 5.0171 0.0 0.0 456.2108326642594 0.0 456.2108326642594 0.0 34.28411676657959 0.0 0.0 0 0.7742275032520141 0.0 0.9247425010840048 0.3807196863200844 GPSQSTN 5.0171 - 568 1 3.513 56362.2 0.4399999976158142 381 3191 3573 SUDHL4_400M_050219_1,3574 SUDHL4_400M_050219_1,3574,VEEKDPQSTN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3576 16.244 189.0 268830.0 25 0 27354.0 + 39101 TWIMMKRP 8 64 531.7844562395233 1061.5543595458464 2 531.7845336794853 MULTI CID FTMS 0 0 0 3575 283627.96875 0.91829598587644 14 -0.0871734619140625 1 Unmodified _TWIMMKRP_ REV__ENST00000464842.1_1_22:38965306-38965369:-|nuORF 19.438996006549623 0.6237395211498085 5 {M(Oxidation (M))|F}K 2 -1 20.93 0.0 0.0 1.9716 0.0 0.0 768.413564723384 0.0 768.413564723384 0.0 6.237125054200234 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.2742275032520141 {M(Oxidation (M))|F}K 1.9716 + + 97 + 1 3.513 47298.5 1.0 382 3192 3575 SUDHL4_400M_050219_1,3576 SUDHL4_400M_050219_1,3576,TWIMMKRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3577 16.258 800.0 57686.0 25 0 4319.8 + 13384 HLKEDQTEY 9 87 581.7727161554253 1161.5308793776503 2 581.7721435427666 MULTI CID FTMS 0 0 0 3575 82413.6328125 0.7754862012872447 -7 0.0474891662597656 2 Unmodified _HLKEDQTEY_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000224411|Q14568|HSP90AA2P;nc|ENSG00000282100|Q58FF6|HSP90AB4P 36.12702656103203 0.0967173616627612 5 [H{I|L}]WWQTEY 8 3 + 57.089 0.0 0.0 4.9149 4.9149 88.631 0.0 0.0 0.0 12.67606240177031 43.69911285071793 12.67606240177031 13.509562869230862 0 0.5 1.5228787452803376 0.9247425010840048 0.4247425010840047 [H{I|L}]WWQTEY;[H{I|L}]WW[AG]TEY;[H{I|L}]WW[NP]{M(Oxidation (M))|F}Y 4.9149;3.7519;2.6572 -;-;- 99 1 3.513 41339.6 0.4300000071525574 383 3192 3575 SUDHL4_400M_050219_1,3577 SUDHL4_400M_050219_1,3577,HLKEDQTEY True True HLKEDQTEY 16.25827 581.772143542767 498521.0 3575.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1;;nc|ENSG00000183199|Q58FF7|HSP90AB3P;;nc|ENSG00000282100|Q58FF6|HSP90AB4P 6.538906256357829 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3579 16.266 225.0 313860.0 25 0 40695.0 + -1 VQIAWLTMK 9 78 553.3054088054388 1104.5962646776777 2 553.3055908083916 MULTI CID FTMS 0 0 0 3578 240509.1875 0.8267631129492949 1 -0.0081462860107421 1 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 24.020572477871973 0.2255576514309169 5 [KT][RD][{I|L}P]TTK 9 -1 40.854 0.0 0.0 3.6985 0.0 0.0 0.0 60.97610367663552 60.97610367663552 24.858923408226573 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.6549471895720984 0.6694451763165201 [KT][RD][{I|L}P]TTK 3.6985 - 232 1 3.513 56228.0 1.0 384 3193 3578 SUDHL4_400M_050219_1,3579 SUDHL4_400M_050219_1,3579,VQIAWLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3584 16.283 53.0 1067200.0 25 0 183430.0 + -1 IQRLETMK 8 63 517.7871155397747 1033.5596781463494 2 517.7870361208916 MULTI CID FTMS 0 0 0 3583 1028055.3125 0.7999338708929122 -12 0.0876712799072265 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 5 KTT[{I|L}P][WP]K 8 -1 48.932 0.0 0.0 4.7343 0.0 0.0 63.99957013200487 0.0 63.99957013200487 0.0 35.22038431917139 0.0 0.0 0 1.305462187404089 0.0 1.274227503252014 0.25 KTT[{I|L}P][WP]K 4.7343 - 70 + 1 3.513 50776.8 1.0 385 3197 3583 SUDHL4_400M_050219_1,3584 SUDHL4_400M_050219_1,3584,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3591 16.315 525.0 125070.0 25 0 7093.5 195 AAPNTRSY 8 121 440.2195365439243 878.4245201546486 2 440.2186157107353 MULTI CID FTMS 0 0 0 3590 65496.01171875 0.5612595460603963 -8 0.0330657958984375 1 Unmodified _AAPNTRSY_ ENST00000584522.1_1_17:27893363-27893582:+|nuORF 23.1484247019978 0.5573009939494978 5 ASY 3 5 36.995 0.0 0.0 4.2115 0.0 0.0 539.2820833817227 0.0 539.2820833817227 0.0 25.885540741363187 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 ASY 4.2115 - 64 1 3.513 58091.7 1.0 386 3203 3590 SUDHL4_400M_050219_1,3591 SUDHL4_400M_050219_1,3591,AAPNTRSY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3594 16.325 190.0 381410.0 25 0 60257.0 -1 EKKLQNTMK 9 73 568.3108448935028 1134.6071368538055 2 568.3107787966728 MULTI CID FTMS 0 0 0 3593 335814.0625 0.5804359742021014 -19 0.1243953704833984 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 5 T{M(Oxidation (M))|F}K 3 -1 41.242 0.0 0.0 3.6349 0.0 0.0 740.4190949376199 0.0 740.4190949376199 0.0 17.624022127867676 0.0 0.0 0 1.3807196863200843 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.6349 + + 143 1 3.513 64797.4 1.0 387 3205 3593 SUDHL4_400M_050219_1,3594 SUDHL4_400M_050219_1,3594,EKKLQNTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3600 16.358 800.0 86192.0 25 0 8176.0 + 7460 EGPKETPSSAN 11 98 558.7623272724784 1115.510101611757 2 558.7623168826103 MULTI CID FTMS 0 0 0 3599 85023.796875 0.2925007458294026 -8 0.0422077178955078 1 Unmodified _EGPKETPSSAN_ ENSG00000151929|ENST00000369085|BAG3 49.52724829834842 0.1202481389936634 5 {[DA]|[EG]}[{I|L}V]DPSQSAN 11 5 + 74.997 0.0 0.0 6.7231 6.7231 90.888 0.0 0.0 0.0 9.11932213720857 56.46768917929503 9.11932213720857 9.128498242811006 0 1.0 1.0 1.3807196863200843 0.0 {[DA]|[EG]}[{I|L}V]DPSQSAN;{[DA]|[EG]}[{I|L}V]DPS[AG]SAN;{[DA]|[EG]}S[VP]{NN|[MP]|[D{I|L}]|[EV]}QSAN;{[DA]|[EG]}S[RK][HM]SAN;[AG]SG[H{I|L}][R{M(Oxidation (M))|F}]SAN;{[QD]|[EN]|[WG]|[KD]|[RS]}[EP]{NN|[MP]|[D{I|L}]|[EV]}QSAN;{[SA]|[TG]}D[VP]{NN|[MP]|[D{I|L}]|[EV]}QSAN;{[DA]|[EG]}S[VP]AWWAN;{[SA]|[TG]}D[RK][HM]SAN;{[DA]|[EG]}[{I|L}V]D{[{M(Oxidation (M))|F}H]|[RQ]}WN 6.7231;5.9048;4.3447;4.1664;3.1834;2.9707;2.8216;2.7084;2.6433;2.614 -;-;-;-;-;-;-;-;-;- 724 1 3.513 58917.3 0.4600000083446502 388 3210 3599 SUDHL4_400M_050219_1,3600 SUDHL4_400M_050219_1,3600,EGPKETPSSAN True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3601 16.366 441.0 261140.0 25 0 24697.0 + 29259 QHINWGTRK 9 140 380.5400216799156 1138.5982356399468 3 380.5397521853447 MULTI CID FTMS 0 0 0 3599 148986.46875 0.7315041001245112 -5 0.0222969055175781 2 Unmodified _QHINWGTRK_ REV__ENST00000476050.5_1_1:209948949-209949477:+|nuORF 8.155526934196011 0.6299788542272896 5 [VS]AG{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}{I|L}K 11 -1 + 34.944 0.0 0.0 3.069 3.069 80.57 0.0 0.0 0.0 10.220891626208797 3.178218335173767 3.178218335173767 8.749938770540425 0 0.6677353201839438 2.0 0.2059771852360797 0.0 [VS]AG{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}{I|L}K;[VS]A[{M(Oxidation (M))|F}E]AQ{M(Oxidation (M))|F}{I|L}K;[VS][{M(Oxidation (M))|F}E]AAQ{M(Oxidation (M))|F}{I|L}K;[VS]A[{M(Oxidation (M))|F}E]A[AG]{M(Oxidation (M))|F}{I|L}K;[VS][{M(Oxidation (M))|F}E]AA[AG]{M(Oxidation (M))|F}{I|L}K;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}{I|L}K;[WK]H[RN]AAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]{I|L}K;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{M(Oxidation (M))|F}E]AQ{M(Oxidation (M))|F}{I|L}K;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AA[Y{I|L}]{I|L}K 3.069;2.3006;2.248;1.4957;1.4431;1.2637;0.97259;0.82912;0.49909;0.41008 -;-;-;-;-;-;-;-;-;- 306 1 3.513 96133.2 1.0 389 3210 3599 SUDHL4_400M_050219_1,3601 SUDHL4_400M_050219_1,3601,QHINWGTRK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3604 16.376 162.0 581910.0 25 0 135280.0 + 13586 HPLTVVLTSNE 11 77 403.887858637387 1208.6417465123611 3 403.8877746462822 MULTI CID FTMS 0 0 0 3603 238232.859375 0.0547437799582906 -12 0.078622817993164 1 Unmodified _HPLTVVLTSNE_ REV__ENSG00000159650|ENST00000290868|UROC1;REV__nc|ENSG00000159650|Q96N76-2|UROC1 7.608950283845883 0.8392484121837455 5 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 -1 34.538 0.0 0.0 2.8576 0.0 0.0 0.0 394.2204378717407 394.2204378717407 17.422393209246607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 2.8576 - 176 + 1 3.513 75950.3 1.0 390 3212 3603 SUDHL4_400M_050219_1,3604 SUDHL4_400M_050219_1,3604,HPLTVVLTSNE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3607 16.396 800.0 100210.0 25 0 7958.7 + -1 RCCWQCRLWWS 11 85 820.8559294999335 1639.697306066667 2 820.8561889529228 MULTI CID FTMS 0 0 0 3606 125654.6171875 0.1622378670442394 44 -0.5252799987792969 1 2 Carbamidomethyl (C) _RC(Carbamidomethyl (C))C(Carbamidomethyl (C))WQCRLWWS_ REV__ENST00000298292.12_1_14:50100549-50100927:-|nuORF 0.3070304955306653 0.8736993455979228 5 [EP]AEQ[QA][EP]AEQGQE 15 -1 + 87.998 0.0 0.0 5.3667 5.3667 79.268 0.0 0.0 0.0 11.204843881168898 11.204843881168898 11.204843881168898 0.6318715488394844 0 1.8182503180159344 0.958607314841775 1.4916440611282624 0.7742275032520141 [EP]AEQ[QA][EP]AEQGQE;[EP]APNS{[SA]|[TG]}[EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;{[CP]|[EA]}PEQ[QA][EP]AEQGQE;{[CP]|[EA]}PPNS{[SA]|[TG]}[EP]AEQGQE;[EP]AEQY[YV]AEQGQE;[EP]AEQNA{M(Oxidation (M))|F}[RH]QGQE;[EP]APN[MN][EP]AEQ[WQ];[EP]AEQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[PA]AEQGQE;{[QG]|[NA]}GAE[EP]A{M(Oxidation (M))|F}[RH]QGQE 5.3667;5.3282;4.6834;4.6468;4.6083;4.5864;4.5266;4.4546;4.2493;4.2466 -;-;-;-;-;-;-;-;-;- 4386 1 3.513 58878.4 0.4699999988079071 391 3214 3606 SUDHL4_400M_050219_1,3607 SUDHL4_400M_050219_1,3607,RCCWQCRLWWS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3611 16.42 800.0 129800.0 25 0 42129.0 + 33825 SLDTQPKKV 9 114 508.29373272912864 1014.5729125250572 2 508.2940551638603 MULTI CID FTMS 0 0 0 3610 121371.6171875 0.3988238834391365 21 -0.2896785736083984 1 Unmodified _SLDTQPKKV_ ENSG00000071564|ENST00000262965|TCF3;nc|ENSG00000071564|P15923-2|TCF3;nc|ENSG00000071564|P15923-3|TCF3 27.628801355627647 0.1796483985696185 5 {[TV]|[{I|L}S]}D 3 6 42.76 0.0 0.0 4.2145 0.0 0.0 0.0 696.4065035455686 696.4065035455686 29.10404363841425 0.0 0.0 0.0 0 0.805462187404089 2.0 0.4247425010840047 0.0 + {[TV]|[{I|L}S]}D 4.2145 + + 260 + 1 3.513 83046.8 0.5400000214576721 392 3217 3610 SUDHL4_400M_050219_1,3611 SUDHL4_400M_050219_1,3611,SLDTQPKKV False True SLDTQPKKV 16.420288 508.29405516386 1646678.25 3610.0 ENSG00000071564|ENST00000262965|TCF3;;nc|ENSG00000071564|P15923-2|TCF3;;nc|ENSG00000071564|P15923-3|TCF3 4.714107354482015 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3612 16.434 800.0 50426.0 25 0 6623.6 -1 0 64 611.3074719390538 1830.9005864173607 3 611.6436035037041 MULTI CID FTMS 0 0 0 3610 73938.140625 1.0 0 0.0 2 5 QASS 4 -1 18.264 0.0 0.0 0.99754 0.0 0.0 928.4423477472424 526.2745455377561 1454.7168932849986 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.3807196863200844 QASS 0.99754 - 56 + 1 3.513 40013.8 0.4199999868869781 393 3217 3610 SUDHL4_400M_050219_1,3612 SUDHL4_400M_050219_1,3612, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3615 16.447 360.0 316160.0 25 0 28374.0 + -1 TLHCWGPLLL 10 74 605.3284287293753 1208.6423045255506 2 605.3284789919853 MULTI CID FTMS 0 0 0 3614 200416.6875 0.2729868914375797 -5 0.0585975646972656 1 Carbamidomethyl (C) _TLHC(Carbamidomethyl (C))WGPLLL_ REV__ENSG00000020129|ENST00000373243|NCDN;REV__nc|ENSG00000020129|Q9UBB6-2|NCDN 10.823927491677226 0.6659270209832991 5 [{I|L}T]HPPE 6 -1 39.085 0.0 0.0 3.2338 0.0 0.0 0.0 531.2792472154488 531.2792472154488 28.11629054940952 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 [{I|L}T]HPPE 3.2338 - 201 + 1 3.513 89158.1 1.0 394 3219 3614 SUDHL4_400M_050219_1,3615 SUDHL4_400M_050219_1,3615,TLHCWGPLLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3616 16.457 547.0 209540.0 25 0 22738.0 + + 18990 RVQEGNESY 9 114 541.7410938210908 1081.4676347089814 2 541.7410156130791 MULTI CID FTMS 0 0 0 3614 161205.265625 0.3622361551753158 -3 0.0381450653076171 2 Unmodified _LDGRAGDESY_ ENSG00000105369|ENST00000221972|CD79A 45.739877483867886 0.1051543674217965 5 [RV]QEGDESY 9 -1 + 86.053 0.0 0.0 7.9571 7.9571 94.148 0.0 0.0 0.0 13.001123851037375 73.31978040647691 13.001123851037375 9.208187539523747 0 1.0 0.8239087409443188 0.9916440611282626 0.805462187404089 [RV]QEGDESY;[RV][AG]EGDESY;[RV]QEGDTDY;[RV][AG]EGDTDY;[NP]GEDK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y;{[ES]|[DT]|[{I|L}C]}[QP][QP]{M(Oxidation (M))|F}SY;[EP][NG]DK{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y;{[ES]|[DT]|[{I|L}C]}[QP]WWSY;[HM]{M(Oxidation (M))|F}[QP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y;{[ES]|[DT]|[{I|L}C]}[QP]KN{[C(Carbamidomethyl (C))G]|[NC]}Y 7.9571;7.1056;6.8643;6.0129;4.831;2.5128;2.3984;2.3549;2.2128;1.8694 -;-;-;-;-;-;-;-;-;- 407 1 3.513 91001.6 1.0 395 3219 3614 SUDHL4_400M_050219_1,3616 SUDHL4_400M_050219_1,3616,LDGRAGDESY False False RVQEGNESY 16.456831 541.741015613079 0.0 3614.0 ENSG00000105369|ENST00000221972|CD79A 4.5539623101552325 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3617 16.471 800.0 44930.0 25 0 3714.5 + 3471 CFKLMFIQSQG 11 60 651.3206669839652 1300.6267810347304 2 651.8219482302666 MULTI CID FTMS 0 0 0 3614 91347.3515625 1.0 0 0.0 3 Unmodified _CFKLMFIQSQG_ ENSG00000169375|ENST00000394947|SIN3A 11.494710602746466 0.7960433852372589 5 SAN 3 10 26.616 0.0 0.0 2.0464 0.0 0.0 1010.5046019349242 0.0 1010.5046019349242 0.0 14.397489324369044 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.2887254899964357 SAN 2.0464 - 52 + 1 3.513 31144.6 0.449999988079071 396 3219 3614 SUDHL4_400M_050219_1,3617 SUDHL4_400M_050219_1,3617,CFKLMFIQSQG False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3618 16.483 725.0 216490.0 25 0 9851.6 -1 0 195 379.2108761872988 378.2035997206988 1 379.2090942263603 MULTI CID FTMS 0 0 0 3614 81034.4921875 0.7737946701765042 -5 0.0585975646972656 4 5 K 1 -1 11.825 0.0 0.0 3.1266 0.0 0.0 232.0982510652285 0.0 232.0982510652285 0.0 0.0422675436476449 0.0 0.0 0 0.0 0.0 0.0 0.1643943297944484 K 3.1266 - 24 + 1 3.513 128222.6 1.0 397 3219 3614 SUDHL4_400M_050219_1,3618 SUDHL4_400M_050219_1,3618, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3621 16.504 800.0 31031.0 25 0 7686.4 -1 0 27 1054.0791041191974 3159.215482957792 3 1054.747485339642 MULTI CID FTMS 0 0 0 3620 46495.78515625 0.6325316430000235 1 -0.0262451171875 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.513 35984.6 0.3300000131130218 398 3221 3620 SUDHL4_400M_050219_1,3621 SUDHL4_400M_050219_1,3621, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3622 16.514 559.0 163260.0 25 0 12792.0 -1 0 122 514.2297473648762 513.2224708982761 1 514.2289306521416 MULTI CID FTMS 0 0 0 3620 96826.1875 0.1659226727574206 -20 0.1920547485351562 2 5 SS 2 -1 16.454 0.0 0.0 3.2059 0.0 0.0 321.14391002488367 0.0 321.14391002488367 0.0 3.6940284046331566 0.0 0.0 0 0.0 0.0 0.0 0.0 SS 3.2059 - 83 1 3.513 77769.1 1.0 399 3221 3620 SUDHL4_400M_050219_1,3622 SUDHL4_400M_050219_1,3622, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3624 16.53 700.0 116030.0 25 0 30414.0 + 18047 KTAETFHKT 9 88 531.7844562395233 1061.5543595458464 2 531.7844726443291 MULTI CID FTMS 0 0 0 3623 77767.46875 0.2517860093263333 44 -0.5042858123779297 1 Unmodified _KTAETFHKT_ REV__ENSG00000169026|ENST00000322224|SLC49A3;REV__ENST00000512400.1_1_4:675749-678780:-|nuORF;REV__nc|ENSG00000169026|Q6UXD7-3|SLC49A3;REV__nc|ENSG00000169026|Q6UXD7|SLC49A3 19.256988751693697 0.3154191944385105 5 {M(Oxidation (M))|F}K 2 -1 18.098 0.0 0.0 1.7048 0.0 0.0 768.4129543718215 0.0 768.4129543718215 0.0 7.260138056596508 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.2396518287104437 {M(Oxidation (M))|F}K 1.7048 - 132 + 1 3.513 67675.1 1.0 400 3222 3623 SUDHL4_400M_050219_1,3624 SUDHL4_400M_050219_1,3624,KTAETFHKT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3625 16.535 300.0 228530.0 25 0 33782.0 + 40171 VGPGLGWAASV 11 80 507.2724569905653 1012.5303610479306 2 507.2729675173759 MULTI CID FTMS 0 0 0 3623 145016.03125 0.5353851006568472 -16 0.1881179809570312 2 Unmodified _VGPGLGWAASV_ REV__ENST00000396465.5_1_8:74204990-74206187:-|nuORF 13.042465956692816 0.7638483625850725 5 [RP]G 3 -1 18.952 0.0 0.0 1.8718 0.0 0.0 0.0 699.3438121034521 699.3438121034521 4.97302484056647 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 [RP]G 1.8718 - 41 + 1 3.513 58796.5 1.0 401 3222 3623 SUDHL4_400M_050219_1,3625 SUDHL4_400M_050219_1,3625,VGPGLGWAASV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3627 16.541 190.0 337920.0 25 0 45849.0 + -1 IQRLETMK 8 75 517.7871155397747 1033.5596781463494 2 517.7869140505791 MULTI CID FTMS 0 0 0 3626 315315.78125 0.2453484461216042 14 -0.1544170379638672 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 5 T{M(Oxidation (M))|F}K 3 -1 39.693 0.0 0.0 3.8404 0.0 0.0 639.3694652355396 0.0 639.3694652355396 0.0 20.22538057041615 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.8404 + + 88 1 3.513 55944.1 1.0 402 3223 3626 SUDHL4_400M_050219_1,3627 SUDHL4_400M_050219_1,3627,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3632 16.567 632.0 113710.0 25 0 8063.1 + 58 AADPGLHET 9 110 455.7171790017731 909.4198050703462 2 455.7166320681572 MULTI CID FTMS 0 0 0 3631 102538.609375 0.9964847658254248 -5 0.0398120880126953 1 Unmodified _AADPGLHET_ ENSG00000235173|ENST00000347708|HGH1;ENST00000530074.1_1_8:145192726-145193642:+|nuORF 26.88365393820708 0.1891292719743517 5 AADQ{[VA]|[{I|L}G]}P 7 4 40.718 0.0 0.0 4.4774 0.0 0.0 0.0 254.07887787613973 254.07887787613973 26.02523206350085 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.7742275032520141 0.0 AADQ{[VA]|[{I|L}G]}P 4.4774 - 247 1 3.513 64514.1 1.0 403 3227 3631 SUDHL4_400M_050219_1,3632 SUDHL4_400M_050219_1,3632,AADPGLHET False True AADPGLHET 16.566918 455.716632068157 474409.46875 3631.0 ENST00000530074.1_1_8:145192726-145193642:+|nuORF;;ENSG00000235173|ENST00000347708|HGH1 4.756789525349935 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3635 16.577 160.0 413890.0 25 0 63268.0 -1 EKKLQNTMK 9 74 568.3108448935028 1134.6071368538055 2 568.3109008669853 MULTI CID FTMS 0 0 0 3634 455403.78125 0.7871401675597324 5 -0.0692901611328125 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 32.78568957990786 0.1150597335874693 5 KTT[{I|L}P]T[WP]K 9 -1 46.806 0.0 0.0 4.1253 0.0 0.0 63.99920753081376 0.0 63.99920753081376 0.0 31.370090806403464 0.0 0.0 0 1.3807196863200843 0.0 1.2302046884880935 0.2614393726401688 KTT[{I|L}P]T[WP]K 4.1253 - 270 + 1 3.513 58112.5 1.0 404 3229 3634 SUDHL4_400M_050219_1,3635 SUDHL4_400M_050219_1,3635,EKKLQNTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3636 16.584 420.0 287450.0 25 0 34487.0 + 45320 YSHSSSSL 8 110 434.19584279047234 866.3771326477447 2 434.1960327029228 MULTI CID FTMS 0 0 0 3634 134287.03125 1.0 0 0.0 2 Unmodified _YSHSSSSL_ ENSG00000139641|ENST00000394048|ESYT1;ENST00000548142.1_1_12:56532791-56536718:+|nuORF;nc|ENSG00000139641|Q9BSJ8-2|ESYT1 13.50788311687929 0.7113601687236069 5 S{I|L} 2 6 14.341 0.0 0.0 1.6553 0.0 0.0 648.2503453936416 0.0 648.2503453936416 0.0 0.8460550734051075 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 + S{I|L} 1.6553 + + 90 + 1 3.513 101537.1 1.0 405 3229 3634 SUDHL4_400M_050219_1,3636 SUDHL4_400M_050219_1,3636,YSHSSSSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3641 16.613 800.0 41608.0 25 0 3496.2 -1 0 56 753.3166739568609 2256.9281924707825 3 753.6495849490166 MULTI CID FTMS 0 0 0 3640 44343.5078125 0.5977467688219649 1 -0.0440731048583984 1 5 ASC 3 -1 23.416 0.0 0.0 1.0375 0.0 0.0 1261.5355035003324 731.3026217096311 1992.838125209964 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.9247425010840048 0.0 ASC 1.0375 - 107 + 1 3.513 32776.4 0.3799999952316284 406 3233 3640 SUDHL4_400M_050219_1,3641 SUDHL4_400M_050219_1,3641, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3642 16.626 800.0 95914.0 25 0 8782.6 7461 EGPKETPSSAN 11 102 558.7623272724784 1115.510101611757 2 558.7620727419853 MULTI CID FTMS 0 0 0 3640 135815.65625 0.4672360234257624 15 -0.2059402465820312 2 Unmodified _EGPKETPSSAN_ ENSG00000151929|ENST00000369085|BAG3 23.80106514851385 0.5333463718001408 5 {[DA]|[EG]}[{I|L}V]DPSQSAN 11 5 + 77.159 0.0 0.0 6.9169 6.9169 91.244 0.0 0.0 0.0 7.702815993690805 55.73246094810261 7.702815993690805 9.128498242810991 0 1.5 1.0969100130080565 1.0 0.0 {[DA]|[EG]}[{I|L}V]DPSQSAN;{[DA]|[EG]}[{I|L}V]DPS[AG]SAN;{[VA]|[{I|L}G]}{NN|[MP]|[D{I|L}]|[EV]}DPSQSAN;{[VA]|[{I|L}G]}{NN|[MP]|[D{I|L}]|[EV]}DPS[AG]SAN;{[DA]|[EG]}[{I|L}V]DH{M(Oxidation (M))|F}WN;{[VA]|[{I|L}G]}{NN|[MP]|[D{I|L}]|[EV]}DH{M(Oxidation (M))|F}WN;{[QD]|[EN]|[WG]|[KD]|[RS]}[WK][HC]WN;C(Carbamidomethyl (C))AHHP[HV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 6.9169;6.0986;5.0504;4.232;3.0536;1.187;0.93558;0.52081 -;-;-;-;-;-;-;- 267 1 3.513 63111.1 0.5699999928474426 407 3233 3640 SUDHL4_400M_050219_1,3642 SUDHL4_400M_050219_1,3642,EGPKETPSSAN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3643 16.64 800.0 81516.0 25 0 12151.0 -1 NCDYYMEE 8 96 562.1865841743894 1122.3586154155787 2 562.1860839724541 MULTI CID FTMS 0 0 0 3640 85583.234375 0.928073041782397 -2 0.0079574584960937 3 Carbamidomethyl (C) _NC(Carbamidomethyl (C))DYYMEE_ ENSG00000124678|ENST00000311875|TCP11;ENST00000510465.5_1_6:35096565-35108647:-|nuORF;nc|ENSG00000124678|Q8WWU5-3|TCP11;nc|ENSG00000124678|Q8WWU5-4|TCP11;nc|ENSG00000124678|Q8WWU5-5|TCP11;nc|ENSG00000124678|Q8WWU5-6|TCP11;nc|ENSG00000124678|Q8WWU5-7|TCP11 2.577480529830294 0.808687252328423 5 W 1 -1 12.218 0.0 0.0 1.0886 0.0 0.0 918.268281408546 0.0 918.268281408546 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.0886 - 15 + 1 3.513 53805.8 0.4600000083446502 408 3233 3640 SUDHL4_400M_050219_1,3643 SUDHL4_400M_050219_1,3643,NCDYYMEE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3645 16.645 17.0 3599800.0 25 0 332450.0 + 27317 PHPHGREALPV 11 80 403.887858637387 1208.6417465123611 3 403.8878356814384 MULTI CID FTMS 0 0 0 3644 2767091.0 0.6358527586243742 10 -0.1214733123779296 1 Unmodified _PHPHGREALPV_ ENST00000400451.6_1_22:20760237-20760540:+|nuORF 6.723162845929126 0.8434276150410019 5 PEH 3 9 21.995 0.0 0.0 1.8198 0.0 0.0 448.2444339538071 394.2206007790192 842.4650347328263 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 PEH 1.8198 - 132 + 1 3.513 50989.5 1.0 409 3234 3644 SUDHL4_400M_050219_1,3645 SUDHL4_400M_050219_1,3645,PHPHGREALPV False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3646 16.649 181.0 342290.0 25 0 36411.0 + 8814 EYDLAKGA 8 83 433.7164267312539 0 433.7163879275322 PEAK CID FTMS 0 0 0 3644 142594.046875 0.9843179260466636 -3 0.0520305633544921 2 Unmodified _EYDLAKGA_ REV__ENSG00000004766|ENST00000305866|VPS50;REV__nc|ENSG00000004766|Q96JG6-3|VPS50 26.88365393820708 0.2878692218834006 5 ED{I|L}A 4 -1 18.003 0.0 0.0 2.0803 0.0 0.0 163.06473715215776 271.1417635553344 434.2065007074922 0.0 0.0 0.0 0.0 0 0.6549471895720985 0.0 0.0 0.0 ED{I|L}A 2.0803 - 38 + 1 3.513 54176.5 1.0 410 3234 3644 SUDHL4_400M_050219_1,3646 SUDHL4_400M_050219_1,3646,EYDLAKGA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3647 16.663 800.0 139560.0 25 0 34600.0 + + 5944 RIADRGAEY 9 100 525.768961202338 1049.523369471476 2 525.7689086794853 MULTI CID FTMS 0 0 0 3644 90885.359375 0.8066621086761765 -1 0.0440731048583984 3 Unmodified _DQGKDKRGF_ ENSG00000115524|ENST00000335508|SF3B1;ENST00000496458.1_1_2:198262707-198263303:-|nuORF 13.90604991867851 0.4602628045680013 5 [VG]{I|L}W{[RE]|[WV]}QY 8 -1 + 48.677 0.0 0.0 4.638 4.638 77.794 0.0 0.0 0.0 25.537275116073346 16.40978057358332 16.40978057358332 1.3033376849500655 0 0.805462187404089 1.3979400086720375 0.0 0.4247425010840047 [VG]{I|L}W{[RE]|[WV]}QY;[VG]{I|L}W[PS]TQY;[VG]{I|L}{[DA]|[EG]}{[RE]|[WV]}QY;[TP]EK{[RE]|[WV]}QY;[VG]{I|L}W{[RE]|[WV]}[AG]Y;[VG]{I|L}W[PS]T[AG]Y;[TP]EAR[WK]Y;[TP]ERRTQY;[TP]EK{[RE]|[WV]}[AG]Y;R{I|L}[WC(Carbamidomethyl (C))][RP]Y 4.638;4.5138;3.7555;3.7221;3.3508;3.2318;2.7017;2.5042;2.4349;2.1934 -;-;-;-;-;-;-;-;-;- 223 + 1 3.513 91063.5 0.449999988079071 411 3234 3644 SUDHL4_400M_050219_1,3647 SUDHL4_400M_050219_1,3647,DQGKDKRGF False False RIADRGAEY 16.66274 525.768908679485 447449.8125 3644.0 ENSG00000115524|ENST00000335508|SF3B1;;ENST00000496458.1_1_2:198262707-198263303:-|nuORF 5.388313055038452 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3648 16.669 350.0 159600.0 25 0 13862.0 14738 ILAVEQNK 8 84 457.7690236639012 913.5234943946024 2 457.7685119509697 MULTI CID FTMS 0 0 0 3644 145718.3125 1.0 0 0.0 4 Unmodified _ILAVEQNK_ ENSG00000163625|ENST00000295888|WDFY3;nc|ENSG00000163625|Q8IZQ1-2|WDFY3 21.74664581756881 0.5868176546531598 5 NK 2 6 32.307 0.0 0.0 3.5365 0.0 0.0 653.3748628529305 0.0 653.3748628529305 0.0 20.334733948153065 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.6861818737241735 + NK 3.5365 + + 92 + 1 3.513 48546.6 1.0 412 3234 3644 SUDHL4_400M_050219_1,3648 SUDHL4_400M_050219_1,3648,ILAVEQNK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3651 16.69 800.0 114420.0 25 0 6125.1 + 17892 KQPDNSPEY 9 125 539.2460399305318 1076.4775269278634 2 539.2445556521416 MULTI CID FTMS 0 0 0 3650 95456.3671875 0.4725792661168307 -19 0.2691993713378906 1 Unmodified _KQPDNSPEY_ ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464093.1_1_1:28887839-28891347:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28887839-28904145:+|nuORF 71.92227651296345 0.0203558744033348 5 [EP]S[KP]MPEY 9 6 + 51.087 0.0 0.0 4.7458 4.7458 81.477 0.0 0.0 0.0 4.066019052589333 9.765895619844969 4.066019052589333 4.066019052589333 0 1.4709587969248012 1.2218487496163564 0.7302046884880937 0.8494850021680094 [EP]S[KP]MPEY;[DP]NS[KQ]PEY;[AG]KYYSPEY;[DP]NV{I|L}MPEY;YYS[KQ]PEY;[KQ]YYSPEY;[DP]T[KP]MPEY;[DP]N[KQ]SPEY;[TP]D[KP]MPEY;[QA][EP]{I|L}MPEY 4.7458;4.3681;4.3307;4.1677;3.9944;3.8647;3.6623;3.6263;3.5621;3.3675 -;-;-;-;-;-;-;-;-;- 597 1 3.513 75434.2 0.4699999988079071 413 3236 3650 SUDHL4_400M_050219_1,3651 SUDHL4_400M_050219_1,3651,KQPDNSPEY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3654 16.702 299.0 343680.0 25 0 30733.0 + 37520 TLHHNHIQPL 10 78 605.3284287293753 1208.6423045255506 2 605.3284789919853 MULTI CID FTMS 0 0 0 3653 244445.671875 0.3329586219736661 14 -0.1381797790527343 1 Unmodified _TLHHNHIQPL_ REV__ENST00000357552.7_2_20:58507149-58508632:-|nuORF 18.1463463914782 0.5430639438673815 5 [{I|L}T]HPPE 6 -1 39.411 0.0 0.0 3.2608 0.0 0.0 0.0 531.2804659479124 531.2804659479124 28.60924374808178 0.0 0.0 0.0 0 1.25 0.0 0.0 0.0 [{I|L}T]HPPE 3.2608 - 227 + 1 3.513 77693.7 1.0 414 3238 3653 SUDHL4_400M_050219_1,3654 SUDHL4_400M_050219_1,3654,TLHHNHIQPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3660 16.734 800.0 131170.0 25 0 12256.0 -1 KELLPAWMK 9 128 566.3143313806231 1130.614109828046 2 566.3139526247978 MULTI CID FTMS 0 0 0 3659 91014.7265625 0.6736193933063659 13 -0.1445159912109375 1 Oxidation (M) _KELLPAWM(Oxidation (M))K_ ENST00000567644.5_1_15:74212283-74217700:-|nuORF 10.823927491677226 0.5436922275383211 5 T{M(Oxidation (M))|F}Q 3 -1 25.022 0.0 0.0 2.2131 0.0 0.0 736.424164439602 0.0 736.424164439602 0.0 10.614029866177155 0.0 0.0 0 1.0317183090963749 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}Q 2.2131 - 416 1 3.513 82378.0 0.4699999988079071 415 3243 3659 SUDHL4_400M_050219_1,3660 SUDHL4_400M_050219_1,3660,KELLPAWMK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3661 16.748 800.0 68334.0 25 0 13836.0 + -1 VGPDCICCC 9 76 570.701003173811 1139.387453414422 2 570.7006103396416 MULTI CID FTMS 0 0 0 3659 84372.9296875 1.0 0 0.0 2 4 Carbamidomethyl (C) _VGPDC(Carbamidomethyl (C))IC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ REV__ENSG00000095564|ENST00000265990|BTAF1 2.302733041254933 0.8342969208511092 5 P 1 -1 9.2082 0.0 0.0 0.80817 0.0 0.0 1024.32355525944 0.0 1024.32355525944 0.0 3.723637474483468 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.80817 + + 32 + 1 3.513 47728.6 0.4600000083446502 416 3243 3659 SUDHL4_400M_050219_1,3661 SUDHL4_400M_050219_1,3661,VGPDCICCC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3662 16.762 800.0 50723.0 25 0 2076.9 -1 0 72 733.0684156631092 2928.244556786037 4 733.3177368044853 MULTI CID FTMS 0 0 0 3659 79459.6328125 0.2240601852590254 -15 0.1507987976074218 3 5 W 1 -1 19.604 0.0 0.0 0.66948 0.0 0.0 2724.154390625684 0.0 2724.154390625684 0.0 14.119543704721591 0.0 0.0 0 0.5 0.0 0.0 0.0 W 0.66948 - 12 + 1 3.513 38678.4 0.4000000059604645 417 3243 3659 SUDHL4_400M_050219_1,3662 SUDHL4_400M_050219_1,3662, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3664 16.768 89.0 488870.0 25 0 38252.0 -1 0 72 514.2297473648762 513.2224708982761 1 514.2294799685478 MULTI CID FTMS 0 0 0 3663 515398.375 0.8831936702540454 3 -0.0363292694091796 1 5 {[QS]|[NT]}{I|L} 3 -1 31.848 0.0 0.0 6.2055 0.0 0.0 0.0 182.02609573641988 182.02609573641988 20.87902692822264 0.0 0.0 0.0 0 0.0 2.0 0.75 0.2887254899964357 {[QS]|[NT]}{I|L} 6.2055 - 47 1 3.513 40478.0 1.0 418 3244 3663 SUDHL4_400M_050219_1,3664 SUDHL4_400M_050219_1,3664, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3665 16.774 352.0 182420.0 25 0 58272.0 + 31142 RLNSADRPM 9 67 530.2725861746344 1058.5306194160687 2 530.2733032107353 MULTI CID FTMS 0 0 0 3663 125782.0234375 0.7656601262256669 -8 0.0886173248291015 2 Unmodified _RLNSADRPM_ nc|ENSG00000189266|Q9NPJ4-2|PNRC2 14.838274106304384 0.4350285940865338 5 [{M(Oxidation (M))|F}V]R 3 8 24.705 0.0 0.0 2.3339 0.0 0.0 0.0 653.2999481893422 653.2999481893422 15.24104976468614 0.0 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 [{M(Oxidation (M))|F}V]R 2.3339 - 36 + 1 3.513 55581.5 1.0 419 3244 3663 SUDHL4_400M_050219_1,3665 SUDHL4_400M_050219_1,3665,RLNSADRPM False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 3668 16.784 192.0 311180.0 25 0 83851.0 + 40172 VGPGLGWAASV 11 75 507.2724569905653 1012.5303610479306 2 507.2716857790947 MULTI CID FTMS 0 0 0 3667 149201.28125 0.5508366371056774 8 -0.0617218017578125 1 Unmodified _VGPGLGWAASV_ REV__ENST00000396465.5_1_8:74204990-74206187:-|nuORF 9.38312468134398 0.8308777417566128 5 [RP]G 3 -1 19.705 0.0 0.0 1.9461 0.0 0.0 0.0 699.3427948006541 699.3427948006541 6.60605612500483 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 [RP]G 1.9461 - 51 + 1 3.513 53848.6 1.0 420 3246 3667 SUDHL4_400M_050219_1,3668 SUDHL4_400M_050219_1,3668,VGPGLGWAASV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3669 16.798 800.0 120060.0 25 0 16510.0 + -1 EHFKCWAQT 9 107 603.7705177121248 1205.5264824910496 2 603.7697631716728 MULTI CID FTMS 0 0 0 3667 69469.6171875 0.6260948161305978 -3 0.0603065490722656 2 Carbamidomethyl (C) _EHFKC(Carbamidomethyl (C))WAQT_ REV__ENSG00000180917|ENST00000434935|CMTR2 14.838274106304384 0.4350285940865338 5 G{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 9 -1 61.227 0.0 0.0 5.0788 0.0 0.0 62.0408034241196 0.0 62.0408034241196 0.0 37.41434719156942 0.0 0.0 0 1.274227503252014 0.0 0.0 0.8921590589602533 G{M(Oxidation (M))|F}Q{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 5.0788 - 687 + 1 3.513 74361.2 0.4799999892711639 421 3246 3667 SUDHL4_400M_050219_1,3669 SUDHL4_400M_050219_1,3669,EHFKCWAQT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3672 16.807 126.0 510570.0 25 0 73242.0 + -1 IQRLETMK 8 73 517.7866105075807 1033.5586680819613 2 517.7869750857353 MULTI CID FTMS 0 0 0 3671 516446.3125 0.928133917678184 1 -0.0051326751708984 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 5 KTT[{I|L}P][WP]K 8 -1 42.981 0.0 0.0 4.1586 0.0 0.0 63.99769873463112 0.0 63.99769873463112 0.0 24.08030623340529 0.0 0.0 0 0.9247425010840048 0.0 1.3494850021680094 0.2614393726401688 KTT[{I|L}P][WP]K 4.1586 - 136 + 1 3.513 55694.4 1.0 422 3248 3671 SUDHL4_400M_050219_1,3672 SUDHL4_400M_050219_1,3672,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3676 16.832 800.0 29626.0 25 0 3561.5 -1 0 33 977.0888284044926 2928.2446558136776 3 977.7567016482352 MULTI CID FTMS 0 0 0 3675 45674.9765625 0.5469259814110181 -7 0.0536537170410156 1 5 C(Carbamidomethyl (C))YH 3 -1 11.198 0.0 0.0 0.38241 0.0 0.0 1531.6542760302775 933.4443453424436 2465.098621372721 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))YH 0.38241 - 10 + 1 3.513 27204.6 0.3600000143051147 423 3251 3675 SUDHL4_400M_050219_1,3676 SUDHL4_400M_050219_1,3676, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3681 16.849 121.0 626310.0 25 0 145490.0 + 31897 RTSEIYVHR 9 78 387.5439389403185 1159.6099874211557 3 387.5437194705009 MULTI CID FTMS 0 0 0 3680 233756.640625 0.7501968207802627 -2 0.0081310272216796 1 Unmodified _RTSEIYVHR_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94517539-94521656:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 30.43146612281011 0.143988730116972 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ES{I|L}YVHR 9 2 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ES + + 49.227 8.0205 1.6949 4.2451 4.2451 56.873 0.0 0.0 0.0 0.0 39.76280941356464 0.0 0.0 0 1.424742501084005 0.0 0.0 0.6307196863200843 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ES{I|L}YVHR 4.2451 - 113 + 1 3.513 64871.5 1.0 424 3255 3680 SUDHL4_400M_050219_1,3681 SUDHL4_400M_050219_1,3681,RTSEIYVHR False True RTSEIYVHR 16.848856 387.543719470501 1311849.625 3680.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94517539-94521656:-|nuORF 10.001550674438477 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3682 16.862 770.0 146430.0 25 0 23760.0 27530 PKTHLLAF 8 99 463.77486781493735 925.5351826966748 2 463.7742492556572 MULTI CID FTMS 0 0 0 3680 112252.3203125 0.6477439159854557 -4 0.0284099578857421 2 Unmodified _PKTHLLAF_ ENSG00000064205|ENST00000190983|CCN5;ENST00000497421.1_1_20:43344031-43348789:+|nuORF;nc|ENSG00000064205|O76076-2|CCN5 24.67388899826682 0.525179942228231 5 KPTH 4 6 45.165 0.0 0.0 4.8799 0.0 0.0 0.0 459.2586153619751 459.2586153619751 30.560931587959672 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 KPTH 4.8799 - 72 + 1 3.513 92088.8 1.0 425 3255 3680 SUDHL4_400M_050219_1,3682 SUDHL4_400M_050219_1,3682,PKTHLLAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3685 16.883 800.0 57068.0 25 0 2180.0 + 8807 EWWLHYYSEDY 11 94 795.830567969472 1589.646583005744 2 795.8300659060478 MULTI CID FTMS 0 0 0 3684 71034.515625 0.8028525916677409 -2 0.022470474243164 1 Unmodified _EWWLHYYSEDY_ REV__ENST00000547733.1_1_12:39687284-39687350:-|nuORF 5.731851221503515 0.8481046878870278 5 [NS]GGNPGYPYGSGGG{[{M(Oxidation (M))|F}C]|[YS]} 17 -1 + 93.423 0.0 0.0 5.877 5.877 79.937 0.0 0.0 0.0 0.1839915956710456 0.1839915956710456 0.1839915956710456 0.1839915956710456 0 2.221848749616356 0.0 2.093569022618561 0.0 [NS]GGNPGYPYGSGGG{[{M(Oxidation (M))|F}C]|[YS]};[WE]GPGGYPYGSNGSY;[WE]GGPGYPYGSNGSY;[SG]GGGNPGYPYGSGGG{[{M(Oxidation (M))|F}C]|[YS]};[WE]GPNYPYGSNGSY;[NS]GGNPGYPYSGGGG{[{M(Oxidation (M))|F}C]|[YS]};[WE]NPGYPYGSNGSY;[SG]GGGNPGYPYSGGGG{[{M(Oxidation (M))|F}C]|[YS]};[SG]NGNPGYPYGSGGG{[{M(Oxidation (M))|F}C]|[YS]};[SG]NGNPGYPYSGGGG{[{M(Oxidation (M))|F}C]|[YS]} 5.877;5.8654;5.8654;5.7694;5.7591;5.7518;5.7447;5.6442;5.6343;5.5091 -;-;-;-;-;-;-;-;-;- 20170 1 3.513 37242.7 0.4000000059604645 426 3257 3684 SUDHL4_400M_050219_1,3685 SUDHL4_400M_050219_1,3685,EWWLHYYSEDY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3686 16.891 470.0 165420.0 25 0 28291.0 + 37793 TLSGHSQEV 9 106 479.2357898346779 956.457026736156 2 479.2349120974541 MULTI CID FTMS 0 0 0 3684 113252.4140625 0.388166616968689 -3 0.0265369415283203 2 Unmodified _TLSGHSQEV_ ENSG00000117399|ENST00000310955|CDC20;ENST00000488829.1_1_9:89626569-89628063:+|nuORF 22.736283301280096 0.2418982879461534 5 [{I|L}T][YT][MT]EV 8 5 + 37.998 0.0 0.0 3.9728 3.9728 78.467 0.0 0.0 0.0 13.25237088993818 4.731770976658552 4.731770976658552 3.4329772470896955 0 1.2302046884880935 2.0 1.0044321917401078 0.0 [{I|L}T][YT][MT]EV;[{I|L}T][{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}C]|[YS]}EV;[{I|L}T][YT]HHW;[{I|L}T][{M(Oxidation (M))|F}V][YE]W;[{I|L}T][YT][MD][{I|L}T];[{I|L}T][YT]{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}T][MD][H{I|L}]EV;{[CT]|[{M(Oxidation (M))|F}G]}HH{M(Oxidation (M))|F}V[{I|L}T];[{M(Oxidation (M))|F}V]{[QC]|[C(Carbamidomethyl (C))A]}[HQ]PV;[{I|L}T][MD][YT][{I|L}T] 3.9728;3.6139;3.4268;3.3546;2.7473;1.9504;1.7938;1.5338;1.5071;1.4506 -;-;-;-;-;-;-;-;-;- 235 + 1 3.513 65612.2 1.0 427 3257 3684 SUDHL4_400M_050219_1,3686 SUDHL4_400M_050219_1,3686,TLSGHSQEV False True TLSGHSQEV 16.890995 479.234912097454 1369571.5 3684.0 ENST00000488829.1_1_9:89626569-89628063:+|nuORF;;ENSG00000117399|ENST00000310955|CDC20 3.349121888478597 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3687 16.905 800.0 176180.0 25 0 30408.0 + 40292 VGVGVLFECK 10 120 525.7840733766714 1049.5535938201426 2 525.7847778201103 MULTI CID FTMS 0 0 0 3684 107012.859375 0.1359075417478514 -13 0.1045341491699218 3 Unmodified _VGVGVLFECK_ REV__ENSG00000099899|ENST00000252136|TRMT2A;REV__ENST00000494820.5_1_22:20100432-20103278:-|nuORF;REV__nc|ENSG00000099899|Q8IZ69-2|TRMT2A 25.399314129420983 0.3980215340001851 5 [VG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}P{I|L}TQ 8 -1 40.42 0.0 0.0 3.8512 0.0 0.0 0.0 178.05071436099846 178.05071436099846 14.935608138961603 0.0 0.0 0.0 0 1.7887254899964358 1.6989700043360187 1.0629529932484498 0.0 [VG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}P{I|L}TQ 3.8512 - 312 + 1 3.513 110635.3 0.4900000095367431 428 3257 3684 SUDHL4_400M_050219_1,3687 SUDHL4_400M_050219_1,3687,VGVGVLFECK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3690 16.921 535.0 141770.0 25 0 11889.0 + 14335 IERDGTESY 9 97 535.2439792856624 1068.4734056381246 2 535.2443725466728 MULTI CID FTMS 0 0 0 3689 113802.140625 0.503300915242464 -6 0.0732555389404296 1 Unmodified _IERDGTESY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 55.50274090549119 0.0285720310785888 5 HESY 4 6 46.3 0.0 0.0 4.3333 0.0 0.0 534.26762587715 0.0 534.26762587715 0.0 10.5818452301162 0.0 0.0 0 0.9247425010840048 0.0 0.75 0.0 HESY 4.3333 - 130 1 3.513 61857.5 1.0 429 3259 3689 SUDHL4_400M_050219_1,3690 SUDHL4_400M_050219_1,3690,IERDGTESY True True IERDGTESY 16.920893 535.244372546673 974594.375 3689.0 ENST00000564794.1_1_16:23700038-23701081:+|nuORF;;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;;ENSG00000166851|ENST00000300093|PLK1 4.644029060999553 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3691 16.933 676.0 159610.0 25 0 20040.0 + 17524 KPLFHVGV 8 111 448.76942057054896 895.5242882078979 2 448.7689086794853 MULTI CID FTMS 0 0 0 3689 118559.1875 0.5208400173361927 -5 0.0691909790039062 2 Unmodified _KPLFHVGV_ REV__ENSG00000101444|ENST00000217426|AHCY;REV__ENST00000480653.5_1_20:32868842-32878296:-|nuORF;REV__nc|ENSG00000101444|P23526-2|AHCY 15.768221252438446 0.6779680726941459 5 KP{I|L} 3 -1 31.867 0.0 0.0 3.5585 0.0 0.0 0.0 554.2669161432249 554.2669161432249 16.382353118286233 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 KP{I|L} 3.5585 + + 25 + 1 3.513 85628.7 1.0 430 3259 3689 SUDHL4_400M_050219_1,3691 SUDHL4_400M_050219_1,3691,KPLFHVGV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3692 16.939 332.0 187220.0 25 0 13205.0 + 9 AAAARKET 8 115 409.23001358600703 816.4454742388141 2 409.2300292849541 MULTI CID FTMS 0 0 0 3689 99474.1171875 0.966531808392599 -1 0.0040664672851562 3 Unmodified _AAAARKET_ REV__ENST00000393389.7_1_11:82905482-82905638:+|nuORF 21.74664581756881 0.5868176546531598 5 AAAAA{[NV]|[RG]}Y 8 -1 55.648 0.0 0.0 6.8159 0.0 0.0 0.0 82.06691156558827 82.06691156558827 45.733516851421726 0.0 0.0 0.0 0 1.174742501084005 2.0 0.0 0.0 AAAAA{[NV]|[RG]}Y 6.8159 - 114 + 1 3.513 52632.7 1.0 431 3259 3689 SUDHL4_400M_050219_1,3692 SUDHL4_400M_050219_1,3692,AAAARKET False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3694 16.956 800.0 98050.0 25 0 5591.7 + 17893 KQPDNSPEY 9 110 539.2460399305318 1076.4775269278634 2 539.2463256716728 MULTI CID FTMS 0 0 0 3693 100873.359375 0.4993973639342446 5 -0.0743637084960937 1 Unmodified _KQPDNSPEY_ ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464093.1_1_1:28887839-28891347:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28887839-28904145:+|nuORF 69.10491478415734 0.0214449631113747 5 YYS[KQ]PEY 8 6 + 48.649 0.0 0.0 4.5193 4.5193 81.829 0.0 0.0 0.0 5.203048474957676 8.679093989569353 5.203048474957676 5.203048474957676 0 1.1989700043360187 0.958607314841775 0.6694451763165201 0.8494850021680094 YYS[KQ]PEY;[DP]NS[KQ]PEY;[KQ]YYSPEY;[PS]ND[KQ]PEY;YYS[EP][KQ]Y;[DP]NS[EP][KQ]Y;YY[DP]T[KQ]Y;[DP]N[DP]T[KQ]Y;[DP]YYT[KQ]Y;[PS]ND[EP][KQ]Y 4.5193;4.036;3.5961;2.82;2.5625;2.3629;1.7888;1.5893;1.1469;1.1469 -;-;-;-;-;-;-;-;-;- 294 1 3.513 65568.8 0.5400000214576721 432 3260 3693 SUDHL4_400M_050219_1,3694 SUDHL4_400M_050219_1,3694,KQPDNSPEY True True KQPDNSPEY 16.956355 539.246325671673 3063081.25 3693.0 ENST00000464093.1_1_1:28887839-28891347:+|nuORF;;ENST00000491577.5_1_1:28887839-28904145:+|nuORF;;ENSG00000180098|ENST00000373830|TRNAU1AP;;ENST00000484775.1_1_1:28887181-28904036:+|nuORF 6.282451788584392 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3695 16.961 250.0 457150.0 25 0 23369.0 + 30074 QVDHADGLEK 10 108 556.2727995665867 1110.5310461999734 2 556.2725097537041 MULTI CID FTMS 0 0 0 3693 363042.21875 0.166588778453169 -13 0.1405792236328125 2 Unmodified _QVDHADGLEK_ REV__ENSG00000163492|ENST00000443758|CCDC141;REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141 53.31671820480216 0.0606844387689228 5 [DV]QHVDAAEK 10 -1 + 124.72 0.0 0.0 11.23 11.23 94.817 0.0 0.0 0.0 9.46046420069429 9.46046420069429 9.46046420069429 9.164539485499247 0 3.524227503252014 1.6989700043360187 0.7614393726401688 0.8494850021680094 [DV]QHVDAAEK;[DV][AG]HVDAAEK;[DV]QHVADAEK;[DV]HQVDAAEK;[DV]HAGVDAAEK;[DV][AG]HVADAEK;[DV]QHAVDAEK;[DV][AG]HAVDAEK;{[NV]|[RG]}EHVDAAEK;[DV]HAAEAAAEK 11.23;10.405;10.244;9.9937;9.5497;9.419;8.924;8.0988;7.8367;7.4728 -;-;-;-;-;-;-;-;-;- 2489 + 1 3.513 92940.1 1.0 433 3260 3693 SUDHL4_400M_050219_1,3695 SUDHL4_400M_050219_1,3695,QVDHADGLEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3696 16.975 800.0 207990.0 25 0 31255.0 + -1 LTGWPLTMK 9 129 531.7844431244799 1061.5543333157598 2 531.7840453982353 MULTI CID FTMS 0 0 0 3693 155031.53125 0.3061400499634959 -20 0.2329578399658203 3 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 34.40172386719151 0.1061884637610825 5 [KT]T{[TV]|[{I|L}S]}HTTK 9 -1 52.444 0.0 0.0 4.9403 0.0 0.0 0.0 60.97550798416003 60.97550798416003 30.12288505487369 0.0 0.0 0.0 0 1.579689690656103 0.0 1.774227503252014 0.3252574989159953 [KT]T{[TV]|[{I|L}S]}HTTK 4.9403 - 1922 1 3.513 130129.6 0.6100000143051147 434 3260 3693 SUDHL4_400M_050219_1,3696 SUDHL4_400M_050219_1,3696,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3697 16.989 800.0 118950.0 25 0 26117.0 -1 LGWEWERVW 9 73 434.8821468786878 0 434.8824035525322 PEAK CID FTMS 0 0 0 3693 95023.59375 0.6460789346423949 -100 1.001276969909668 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LGWEWERVW_ ENST00000368378.7_1_1:155170954-155170984:-|nuORF 5.230669730166228 0.3444685223463734 5 M 1 -1 0.48455 0.0 0.0 0.05584 0.0 0.0 469.55596748608815 264.12397180728755 733.6799392933757 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.05584 - 1 + 1 3.513 80853.0 0.4199999868869781 435 3260 3693 SUDHL4_400M_050219_1,3697 SUDHL4_400M_050219_1,3697,LGWEWERVW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3700 17.005 551.0 61581.0 25 0 2430.4 -1 0 59 733.0684156631092 2928.244556786037 4 733.3191406130791 MULTI CID FTMS 0 0 0 3699 162898.484375 0.4593409671751616 4 -0.025125503540039 1 5 HW 2 -1 24.464 0.0 0.0 0.83545 0.0 0.0 2587.0721312852056 0.0 2587.0721312852056 0.0 20.96910013008056 0.0 0.0 0 0.5 0.0 0.0 0.0 HW 0.83545 - 7 1 3.513 33754.5 1.0 436 3262 3699 SUDHL4_400M_050219_1,3700 SUDHL4_400M_050219_1,3700, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3704 17.018 106.0 495790.0 25 0 43719.0 + -1 NTIDPSHPM 9 75 514.2294310812028 1026.4443092292056 2 514.2296020388603 MULTI CID FTMS 0 0 0 3703 574628.0625 1.0 0 0.0 1 Oxidation (M) _NTIDPSHPM(Oxidation (M))_ nc|ENSG00000090861|P49588-2|AARS1;ENSG00000090861|ENST00000261772|AARS1 39.957323273325 0.0756908302845263 5 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}DR{M(Oxidation (M))|F} 8 -1 + 62.687 0.0 0.0 6.1072 6.1072 83.941 0.0 0.0 0.0 47.81743128760553 7.166987712964499 7.166987712964499 2.795000083553205 0 0.3807196863200844 2.0 0.6307196863200843 0.0 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}DR{M(Oxidation (M))|F};{[QS]|[NT]}{I|L}DPSHP{M(Oxidation (M))|F};{[QS]|[NT]}{[{M(Oxidation (M))|F}D]|MM}{I|L}DR{M(Oxidation (M))|F};{[QS]|[NT]}[YE][TP]R{M(Oxidation (M))|F} 6.1072;5.8349;4.0926;1.961 -;+;-;- + 141 + 1 3.513 46077.1 1.0 437 3265 3703 SUDHL4_400M_050219_1,3704 SUDHL4_400M_050219_1,3704,NTIDPSHPM False False NTIDPSHPM 17.017828 514.22960203886 8224987.5 3703.0 nc|ENSG00000090861|P49588-2|AARS1;;ENSG00000090861|ENST00000261772|AARS1 8.53263028462728 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3708 17.041 746.0 127350.0 25 0 22493.0 + 39551 VAYHGHGVSA 10 117 499.24620224547726 996.4778515577544 2 499.2453491091728 MULTI CID FTMS 0 0 0 3707 83264.515625 0.6636347945033519 -7 0.037271499633789 1 Unmodified _VAYHGHGVSA_ ENST00000429772.6_1_12:48357436-48358078:+|nuORF;ENST00000550146.5_1_12:48357374-48358078:+|nuORF 25.399314129420983 0.3980215340001851 5 {[VA]|[{I|L}G]}YH 4 6 23.945 0.0 0.0 2.403 0.0 0.0 0.0 523.2282808893186 523.2282808893186 2.5185720258015465 0.0 0.0 0.0 0 0.3054621874040891 1.3979400086720375 0.0 0.0 + {[VA]|[{I|L}G]}YH 2.403 + + 237 + 1 3.513 73713.4 1.0 438 3268 3707 SUDHL4_400M_050219_1,3708 SUDHL4_400M_050219_1,3708,VAYHGHGVSA False True VAYHGHGVSA 17.041386 499.245349109173 463065.53125 3707.0 ENST00000550146.5_1_12:48357374-48358078:+|nuORF;;ENST00000429772.6_1_12:48357436-48358078:+|nuORF 7.0978743235270185 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3709 17.053 642.0 163900.0 25 0 43402.0 + 25258 MVPETTHEA 9 108 507.7320113595106 1013.4494697858212 2 507.7320739626884 MULTI CID FTMS 0 0 0 3707 87256.921875 0.9260800023879824 -2 0.0081024169921875 2 Unmodified _MVPETTHEA_ ENSG00000100023|ENST00000398831|PPIL2;nc|ENSG00000100023|Q13356-2|PPIL2 18.1463463914782 0.3454829746528889 5 {M(Oxidation (M))|F}EP[DP] 5 7 18.077 0.0 0.0 1.7837 0.0 0.0 410.1827564923844 0.0 410.1827564923844 0.0 4.124379954164592 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 {M(Oxidation (M))|F}EP[DP] 1.7837 - 347 1 3.513 89175.8 1.0 439 3268 3707 SUDHL4_400M_050219_1,3709 SUDHL4_400M_050219_1,3709,MVPETTHEA False True MVPETTHEA 17.052571 507.732073962688 1030073.1875 3707.0 nc|ENSG00000100023|Q13356-2|PPIL2;;ENSG00000100023|ENST00000398831|PPIL2 6.982329527537028 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3712 17.063 214.0 315880.0 25 0 52189.0 + -1 IQRLETMK 8 86 517.7863809953021 1033.5582090574042 2 517.7868530154228 MULTI CID FTMS 0 0 0 3711 244547.09375 0.8308325390062549 -1 0.0040512084960937 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 5 T{M(Oxidation (M))|F}K 3 -1 31.541 0.0 0.0 3.0517 0.0 0.0 639.3697762954886 0.0 639.3697762954886 0.0 17.829693599488294 0.0 0.0 0 1.0 0.0 0.0 0.25 T{M(Oxidation (M))|F}K 3.0517 + + 144 + 1 3.513 57251.8 1.0 440 3270 3711 SUDHL4_400M_050219_1,3712 SUDHL4_400M_050219_1,3712,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3713 17.071 460.0 161100.0 25 0 10735.0 + 2774 ATQVTKGL 8 124 409.2437807483862 816.4730085635724 2 409.2439147830009 MULTI CID FTMS 0 0 0 3711 64898.76953125 0.77405676349952 -3 0.0347652435302734 2 Unmodified _ATQVTKGL_ REV__ENSG00000111642|ENST00000544040|CHD4;REV__nc|ENSG00000111642|Q14839-2|CHD4 18.1463463914782 0.6428359029697936 5 [TA]QV{[VA]|[{I|L}G]}TK 8 -1 + 43.58 0.0 0.0 5.3376 5.3376 88.868 0.0 0.0 0.0 22.823189597066893 3.218421963928435 3.218421963928435 9.2621378583908 0 0.6861818737241735 2.0 0.0 0.5114393726401688 [TA]QV{[VA]|[{I|L}G]}TK;[TA][AG]V{[VA]|[{I|L}G]}TK 5.3376;4.2032 -;- 122 + 1 3.513 61844.9 1.0 441 3270 3711 SUDHL4_400M_050219_1,3713 SUDHL4_400M_050219_1,3713,ATQVTKGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3714 17.085 800.0 101770.0 25 0 9630.2 + -1 EKMSEIMEK 9 97 570.7683876146845 1139.5222222961688 2 570.7679321169853 MULTI CID FTMS 0 0 0 3711 85120.7578125 1.0 0 0.0 3 Oxidation (M) _EKM(Oxidation (M))SEIMEK_ REV__ENSG00000112992|ENST00000344920|NNT 10.073929032068715 0.563993802247229 5 [AG]{[QD]|[EN]|[WG]|[KD]|[RS]}HVDAAEK 11 -1 + 43.209 0.0 0.0 3.7919 3.7919 87.108 0.0 0.0 0.0 22.719710455794804 16.76577546912856 16.76577546912856 33.45030027244936 0 0.0 1.0457574905606752 0.4247425010840047 0.3054621874040891 [AG]{[QD]|[EN]|[WG]|[KD]|[RS]}HVDAAEK;[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}HVWWAA 3.7919;0.85642 -;- 243 + 1 3.513 66633.6 0.4699999988079071 442 3270 3711 SUDHL4_400M_050219_1,3714 SUDHL4_400M_050219_1,3714,EKMSEIMEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3718 17.102 322.0 335020.0 25 0 104000.0 + 26593 NVPHITTN 8 101 448.23611629314246 0 448.2361022830009 PEAK CID FTMS 0 0 0 3717 150378.59375 0.3621477224861795 -19 0.2536334991455078 1 Unmodified _NVPHITTN_ REV__ENSG00000214782|ENST00000529108|MS4A18 4.75600775471527 0.5825752635465162 5 P 1 -1 6.9897 0.0 0.0 0.78145 0.0 0.0 127.02849735356764 667.3527955919052 794.3812929454729 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.78145 + + 10 + 1 3.513 92481.8 1.0 443 3273 3717 SUDHL4_400M_050219_1,3718 SUDHL4_400M_050219_1,3718,NVPHITTN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3725 17.138 800.0 113710.0 25 0 17051.0 17451 KNRFALQFW 9 88 605.3284287293753 1208.6423045255506 2 605.3282348513603 MULTI CID FTMS 0 0 0 3724 62338.1796875 0.0849106234767397 55 -0.4458980560302734 1 Unmodified _KNRFALQFW_ ENST00000401470.3_1_9:138375345-138375855:+|nuORF 11.640296217721598 0.521594087909532 5 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]E 5 5 24.705 0.0 0.0 2.044 0.0 0.0 0.0 531.2790621393186 531.2790621393186 9.114911554500363 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]E 2.044 - 125 + 1 3.513 71576.9 0.4399999976158142 444 3279 3724 SUDHL4_400M_050219_1,3725 SUDHL4_400M_050219_1,3725,KNRFALQFW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3727 17.147 366.0 133680.0 25 0 8942.9 37779 TLSDPGDRP 9 83 479.2357898346779 956.457026736156 2 479.2344848513603 MULTI CID FTMS 0 0 0 3726 86291.390625 0.2957591451776467 20 -0.1458854675292968 1 Unmodified _TLSDPGDRP_ ENSG00000005884|ENST00000320031|ITGA3;ENST00000505306.5_1_17:48154319-48165696:+|nuORF;nc|ENSG00000005884|P26006-1|ITGA3 15.847184025352805 0.4077185912009129 5 [{I|L}T][DG]Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}K 8 6 + 38.394 0.0 0.0 4.0142 4.0142 87.073 0.0 0.0 0.0 23.79014239929509 8.231909543645205 8.231909543645205 23.443554337702807 0 0.2887254899964357 2.0 0.7614393726401688 0.4247425010840047 [{I|L}T][DG]Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}K;[{I|L}T][YT][MT]{NN|[MP]|[D{I|L}]|[EV]};[{I|L}T][YT][MD][{I|L}T];[{I|L}T][HK][C(Carbamidomethyl (C))C]PV;[{I|L}T][C(Carbamidomethyl (C))C][HK]PV;[{M(Oxidation (M))|F}V][MT]A{[CA]|SS}SK;[{M(Oxidation (M))|F}V]{[QC]|[C(Carbamidomethyl (C))A]}[HQ]PV 4.0142;1.5631;1.0643;1.0476;0.88109;0.43482;0.27964 -;-;-;-;-;-;- 93 + 1 3.513 43184.1 1.0 445 3280 3726 SUDHL4_400M_050219_1,3727 SUDHL4_400M_050219_1,3727,TLSDPGDRP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3729 17.153 134.0 524170.0 25 0 97336.0 + 28053 PPDAPPSKNK 10 76 525.7840733766714 1049.5535938201426 2 525.7842895388603 MULTI CID FTMS 0 0 0 3728 504212.875 0.6403560540208836 11 -0.1023426055908203 1 Unmodified _PPDAPPSKNK_ REV__ENSG00000156970|ENST00000287598|BUB1B;REV__nc|ENSG00000156970|O60566-2|BUB1B;REV__nc|ENSG00000156970|O60566-3|BUB1B 17.11289562659939 0.5604042439455784 5 T[{I|L}P][WP]K 6 -1 38.231 0.0 0.0 3.6426 0.0 0.0 309.137208856017 0.0 309.137208856017 0.0 30.90645438351972 0.0 0.0 0 1.805462187404089 0.0 0.4247425010840047 0.3252574989159953 T[{I|L}P][WP]K 3.6426 - 55 + 1 3.513 58099.0 1.0 446 3281 3728 SUDHL4_400M_050219_1,3729 SUDHL4_400M_050219_1,3729,PPDAPPSKNK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3732 17.162 117.0 509050.0 25 0 62340.0 18170 KTTANLAALK 10 78 515.8165506724823 1029.6185484117646 2 515.8165771365166 MULTI CID FTMS 0 0 0 3731 519865.6875 0.1304763724672416 -13 0.10009765625 1 Unmodified _KTTANLAALK_ ENSG00000047188|ENST00000161863|YTHDC2 33.4449034751529 0.2267874087365337 5 KT{I|L}QTQ{I|L}AK 9 6 + 87.846 0.0 0.0 8.5319 8.5319 94.703 0.0 0.0 0.0 65.65465986884661 17.14719041932895 17.14719041932895 9.208187539523747 0 2.274227503252014 0.0 0.4247425010840047 0.3054621874040891 KT{I|L}QTQ{I|L}AK;KT{I|L}[AG]TQ{I|L}AK;KT{I|L}QT[AG]{I|L}AK;KT{I|L}[AG]T[AG]{I|L}AK;[{I|L}T]QAG[KT]{I|L}AK;[{I|L}T]QQ[KT]{I|L}AK;[KT][PS]G[KT]{I|L}AK;[QT]{I|L}AG[KT]{I|L}AK;[QT]{I|L}Q[KT]{I|L}AK;[{I|L}T][AG]AG[KT]{I|L}AK 8.5319;7.6376;7.6376;6.7475;4.1917;3.8496;3.6683;3.6547;3.3127;3.3016 -;-;-;-;-;-;-;-;-;- 430 + 1 3.513 51330.6 1.0 447 3283 3731 SUDHL4_400M_050219_1,3732 SUDHL4_400M_050219_1,3732,KTTANLAALK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3735 17.176 426.0 172830.0 25 0 42205.0 + 36741 TDSQRRVKPA 10 72 579.323111778711 1156.631670624222 2 579.3231689333916 MULTI CID FTMS 0 0 0 3734 118236.4765625 0.0570627970990685 -20 0.1527767181396484 1 Unmodified _TDSQRRVKPA_ REV__ENSG00000100767|ENST00000644200|PAPLN;REV__nc|ENSG00000100767|O95428-3|PAPLN;REV__nc|ENSG00000100767|O95428-4|PAPLN;REV__nc|ENSG00000100767|O95428-5|PAPLN;REV__nc|ENSG00000100767|O95428-6|PAPLN 3.944395688203298 0.708391353636983 5 W 1 -1 14.604 0.0 0.0 1.2626 0.0 0.0 952.5411077353532 0.0 952.5411077353532 0.0 8.661968799114844 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.2626 - 30 + 1 3.513 59927.5 1.0 448 3285 3734 SUDHL4_400M_050219_1,3735 SUDHL4_400M_050219_1,3735,TDSQRRVKPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3736 17.187 664.0 237460.0 25 0 56506.0 -1 0 100 434.22021726642953 433.2129407998296 1 434.2210265994072 MULTI CID FTMS 0 0 0 3734 100665.4296875 0.708421552656421 47 -0.393402099609375 2 5 W 1 -1 13.979 0.0 0.0 3.2269 0.0 0.0 229.1229424861561 0.0 229.1229424861561 0.0 2.559416804894372 0.0 0.0 0 0.0 0.0 0.0 0.0 W 3.2269 - 16 + 1 3.513 127037.8 1.0 449 3285 3734 SUDHL4_400M_050219_1,3736 SUDHL4_400M_050219_1,3736, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3737 17.198 594.0 184260.0 25 0 16668.0 + 39360 AVAGARDTY 9 117 462.2327713756008 922.4509898180016 2 462.2328369021416 MULTI CID FTMS 0 0 0 3734 94791.890625 1.0 0 0.0 3 Unmodified _VAGPHDIGAS_ ENST00000477642.5_1_2:38525261-38527422:-|nuORF;nc|ENSG00000119787|Q8NHH9-2|ATL2;ENSG00000119787|ENST00000378954|ATL2;nc|ENSG00000119787|Q8NHH9-5|ATL2;nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2 15.847184025352805 0.5816416552707754 5 {[VA]|[{I|L}G]}AGY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W 8 7 + 53.739 0.0 0.0 5.8256 5.8256 86.528 0.0 0.0 0.0 40.3737673202476 9.13303128443836 9.13303128443836 6.409780573583319 0 0.9247425010840048 2.0 0.2887254899964357 0.0 {[VA]|[{I|L}G]}AGY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W;{[VA]|[{I|L}G]}QY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}W;{[VA]|[{I|L}G]}AG{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS]W;{[VA]|[{I|L}G]}A[YQ][VS]W;{[VA]|[{I|L}G]}AGWWHP;{[VA]|[{I|L}G]}Q{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS]W;{[VA]|[{I|L}G]}A[HT][YV]Y;{[VA]|[{I|L}G]}QWWHP;{[VA]|[{I|L}G]}AG{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P;{[VA]|[{I|L}G]}A[YQ]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P 5.8256;5.1308;3.7031;3.518;3.2151;3.0008;2.7154;2.5202;2.3294;2.1443 -;-;-;-;-;-;-;-;-;- 363 + 1 3.513 89840.6 1.0 450 3285 3734 SUDHL4_400M_050219_1,3737 SUDHL4_400M_050219_1,3737,VAGPHDIGAS False False AVAGARDTY 17.197864 462.232836902142 393394.5 3734.0 ENST00000477642.5_1_2:38525261-38527422:-|nuORF;;nc|ENSG00000119787|Q8NHH9-2|ATL2;;ENSG00000119787|ENST00000378954|ATL2;;nc|ENSG00000119787|Q8NHH9-5|ATL2;;nc|ENSG00000119787|Q8NHH9-3|ATL2;;nc|ENSG00000119787|Q8NHH9-4|ATL2 -0.4828763008117676 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3740 17.207 82.0 596330.0 25 0 38944.0 + 30075 QVDHADGLEK 10 76 556.2727995665867 1110.5310461999734 2 556.2726318240166 MULTI CID FTMS 0 0 0 3739 659174.4375 0.3024746397506415 14 -0.0862903594970703 1 Unmodified _QVDHADGLEK_ REV__ENSG00000163492|ENST00000443758|CCDC141;REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141 17.44264345198275 0.5548713957087773 5 [DV]HQVDAA 8 -1 72.644 0.0 0.0 6.5414 0.0 0.0 0.0 272.1270615280352 272.1270615280352 51.33207860292117 0.0 0.0 0.0 0 2.3807196863200843 1.3979400086720375 0.2742275032520141 0.0 [DV]HQVDAA 6.5414 - 481 1 3.513 42790.1 1.0 451 3287 3739 SUDHL4_400M_050219_1,3740 SUDHL4_400M_050219_1,3740,QVDHADGLEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3741 17.209 133.0 424310.0 25 0 42309.0 23152 LSPVAIEQTSL 11 78 386.551007259689 1156.631192379267 3 386.5509521365166 MULTI CID FTMS 0 0 0 3739 265309.8125 0.1596982954507833 -17 0.1452827453613281 2 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 28.49450938151212 0.4231428536161201 5 QTS{I|L} 4 7 34.412 0.0 0.0 2.9752 0.0 0.0 709.399466758541 0.0 709.399466758541 0.0 16.453650195120844 0.0 0.0 0 0.5 0.0 0.5 0.0 + QTS{I|L} 2.9752 + + 40 1 3.513 49621.8 1.0 452 3287 3739 SUDHL4_400M_050219_1,3741 SUDHL4_400M_050219_1,3741,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3742 17.223 800.0 97119.0 25 0 8615.5 + 36068 SVQHVDAAEK 10 109 542.2753661848154 1082.5361794364308 2 542.2756835818291 MULTI CID FTMS 0 0 0 3739 95283.5703125 0.8798626449256334 -5 0.0492515563964843 3 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 66.61675797227278 0.0192292371508206 5 [VS]QHVDAAEK 10 0 + 96.87 0.0 0.0 8.9484 8.9484 93.488 0.0 0.0 0.0 8.635667503057903 8.635667503057903 8.635667503057903 8.635667503057903 0 3.071333751784365 2.0 0.5 0.7614393726401688 + + [VS]QHVDAAEK;[VS]AGHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVD[DV]GK;[VS]Q{[QV]|[N{I|L}]|[RA]|[KV]}{[YC]|[HE]}EK;[VS]QHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]QHVDA{[TV]|[{I|L}S]}Q;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AEK;[VS]AG{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T]GK 8.9484;8.1507;8.1018;6.6478;5.9389;5.8277;5.7441;5.7282;5.7021;5.5321 +;-;-;-;-;-;-;-;-;- + 1315 + 1 3.513 66369.8 0.4799999892711639 453 3287 3739 SUDHL4_400M_050219_1,3742 SUDHL4_400M_050219_1,3742,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3743 17.23 383.0 136120.0 25 0 8548.3 + 40344 VHLTPEEK 8 89 476.7589704086994 951.5033878841988 2 476.7583190798759 MULTI CID FTMS 0 0 0 3739 94132.46875 1.0 0 0.0 4 Unmodified _VHLTPEEK_ ENSG00000223609|ENST00000650601|HBD;ENSG00000244734|ENST00000335295|HBB;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 47.74868867922204 0.1498366402366518 5 VH{I|L}T[EP]EK 8 0 + 70.672 0.0 0.0 7.4274 7.4274 96.876 0.0 0.0 0.0 53.44843468456581 10.462659351691528 10.462659351691528 39.35102988983475 0 1.4559771852360797 1.0969100130080565 0.805462187404089 0.1505149978319906 + + VH{I|L}T[EP]EK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}{[MS]|[{M(Oxidation (M))|F}A]};V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T[NS]EK 7.4274;3.2917;2.4211 +;-;- + 134 + 1 3.513 45893.3 1.0 454 3287 3739 SUDHL4_400M_050219_1,3743 SUDHL4_400M_050219_1,3743,VHLTPEEK False True VHLTPEEK 17.23011 476.758319079876 342267.25 3739.0 ENSG00000244734|ENST00000335295|HBB;;ENSG00000223609|ENST00000650601|HBD;;ENST00000485743.1_1_11:5247788-5248251:-|nuORF 8.38002316157023 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3745 17.235 118.0 506730.0 25 0 63352.0 + -1 LTGWPLTMK 9 76 531.7844431244799 1061.5543333157598 2 531.7844116091728 MULTI CID FTMS 0 0 0 3744 396606.6875 0.783177397192267 8 -0.0380382537841796 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 27.628801355627647 0.1796483985696185 5 HT{M(Oxidation (M))|F}K 4 -1 36.885 0.0 0.0 3.4747 0.0 0.0 530.3047738448598 0.0 530.3047738448598 0.0 20.98258770979733 0.0 0.0 0 1.0 0.0 0.2614393726401688 0.25 HT{M(Oxidation (M))|F}K 3.4747 - 195 + 1 3.513 50055.6 1.0 455 3288 3744 SUDHL4_400M_050219_1,3745 SUDHL4_400M_050219_1,3745,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3746 17.238 111.0 741700.0 25 0 230920.0 + 27318 PHPHGREALPV 11 73 403.887858637387 1208.6417465123611 3 403.8877136111259 MULTI CID FTMS 0 0 0 3744 312016.1875 0.0716985287283052 64 -0.5354480743408203 2 Unmodified _PHPHGREALPV_ ENST00000400451.6_1_22:20760237-20760540:+|nuORF 6.723162845929126 0.8434276150410019 5 PEH 3 9 17.435 0.0 0.0 1.4425 0.0 0.0 448.2436683054692 394.2208444450672 842.4645127505364 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PEH 1.4425 - 56 + 1 3.513 67507.4 1.0 456 3288 3744 SUDHL4_400M_050219_1,3746 SUDHL4_400M_050219_1,3746,PHPHGREALPV False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3753 17.264 206.0 263120.0 25 0 42000.0 + 31964 RVFDHKQGTY 10 72 417.547276452992 1249.619999959176 3 417.5471984744072 MULTI CID FTMS 0 0 0 3752 174528.3125 0.1210306585244855 -19 0.1520118713378906 1 Unmodified _RVFDHKQGTY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 19.361941925380144 0.5226674314761524 5 HA[HK]Y 5 7 23.927 0.0 0.0 1.9147 0.0 0.0 595.2946958593699 0.0 595.2946958593699 0.0 9.947274948966935 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3252574989159953 HA[HK]Y 1.9147 - 53 + 1 3.513 53247.0 1.0 457 3294 3752 SUDHL4_400M_050219_1,3753 SUDHL4_400M_050219_1,3753,RVFDHKQGTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3761 17.304 792.0 150790.0 25 0 25876.0 17574 KPRNGNRR 8 131 499.2932059690744 996.5718590049488 2 499.2928039431572 MULTI CID FTMS 0 0 0 3760 40811.4375 0.4205002763428467 1 -0.0162334442138671 1 Unmodified _KPRNGNRR_ ENST00000580482.5_1_17:63793289-63848140:-|nuORF 12.531546534597751 0.7257836412119636 5 KPT 3 6 35.445 0.0 0.0 3.5567 0.0 0.0 0.0 667.3540133111936 667.3540133111936 16.086812544029453 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 KPT 3.5567 - 554 + 1 3.513 95313.4 1.0 458 3301 3760 SUDHL4_400M_050219_1,3761 SUDHL4_400M_050219_1,3761,KPRNGNRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3764 17.317 330.0 320810.0 25 0 77424.0 + 15947 ITAKDSAKN 9 98 474.26170459794713 946.5088562626944 2 474.2614318728447 MULTI CID FTMS 0 0 0 3763 175066.75 0.0205170108479541 -20 0.1517372131347656 1 Unmodified _ITAKDSAKN_ REV__ENSG00000108469|ENST00000317905|RECQL5;REV__nc|ENSG00000108469|O94762-2|RECQL5;REV__nc|ENSG00000108469|O94762-3|RECQL5;REV__nc|ENSG00000108469|O94762-4|RECQL5 30.63653989081413 0.1413794767160703 5 [{I|L}T]AQSVSNK 9 -1 + 77.674 0.0 0.0 8.2063 8.2063 94.412 0.0 0.0 0.0 63.694116599473176 12.421525057367404 12.421525057367404 9.208187539523747 0 1.174742501084005 2.0 0.3807196863200844 0.6747425010840047 [{I|L}T]AQSVSNK;[{I|L}T]A[AG]SVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSGGK;{[CT]|[{M(Oxidation (M))|F}G]}[R{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VP 8.2063;7.2335;7.2335;6.2652;0.72537 -;-;-;-;- 514 + 1 3.513 90366.5 1.0 459 3303 3763 SUDHL4_400M_050219_1,3764 SUDHL4_400M_050219_1,3764,ITAKDSAKN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3765 17.331 800.0 130620.0 25 0 11389.0 + 31966 RVFDHKQGTY 10 92 625.8177746292597 1249.6209963253193 2 625.8171264529228 MULTI CID FTMS 0 0 0 3763 89078.9453125 0.2613423171429721 -10 0.0546855926513671 2 Unmodified _RVFDHKQGTY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 88.36371040165146 0.0102134265615327 5 DHKQGTY 7 3 79.593 0.0 0.0 6.3693 0.0 0.0 402.2379933087906 0.0 402.2379933087906 0.0 60.75908880230051 0.0 0.0 0 2.055462187404089 0.0 0.8494850021680094 0.7302046884880937 + DHKQGTY 6.3693 + + 274 1 3.513 80457.0 0.5099999904632568 460 3303 3763 SUDHL4_400M_050219_1,3765 SUDHL4_400M_050219_1,3765,RVFDHKQGTY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3768 17.34 59.0 1001200.0 25 0 276170.0 + 25915 NLLHAAEK 8 89 448.2532583053137 894.4919636774274 2 448.2534973025322 MULTI CID FTMS 0 0 0 3767 414828.0 0.7837922032771847 -3 0.0303955078125 1 Unmodified _NLLHAAEK_ REV__ENSG00000137171|ENST00000347162|KLC4;REV__ENSG00000174996|ENST00000394067|KLC2;REV__ENST00000467906.5_1_6:43030654-43039600:+|nuORF;REV__nc|ENSG00000137171|Q9NSK0-3|KLC4;REV__nc|ENSG00000137171|Q9NSK0-4|KLC4;REV__nc|ENSG00000137171|Q9NSK0-5|KLC4;REV__nc|ENSG00000174996|Q9H0B6-2|KLC2 11.640296217721598 0.738950129755968 5 {M(Oxidation (M))|F}TAEK 5 -1 22.932 0.0 0.0 2.5637 0.0 0.0 300.2137176830899 0.0 300.2137176830899 0.0 10.713337517843655 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.3054621874040891 {M(Oxidation (M))|F}TAEK 2.5637 - 78 + 1 3.513 55862.6 1.0 461 3305 3767 SUDHL4_400M_050219_1,3768 SUDHL4_400M_050219_1,3768,NLLHAAEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3769 17.349 502.0 161750.0 25 0 12161.0 + 2790 TATPTIMK 8 118 439.7361586593354 877.4577643854708 2 439.7359496951103 MULTI CID FTMS 0 0 0 3767 145016.140625 0.1676913309545496 -20 0.1690540313720703 2 Unmodified _ATTLPAAYA_ ENSG00000020577|ENST00000554335|SAMD4A;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 23.1484247019978 0.2366544122328345 5 [TA]TP{I|L}TQ{M(Oxidation (M))|F} 8 5 + 58.101 0.0 0.0 6.6216 6.6216 84.095 0.0 0.0 0.0 22.47425010840047 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.9247425010840048 1.6989700043360187 0.7742275032520141 0.0 [TA]TP{I|L}TQ{M(Oxidation (M))|F};[TA]TP{I|L}T{M(Oxidation (M))|F}K;[TA]TP{I|L}TAG{M(Oxidation (M))|F};[TA]TP[QT]{I|L}{M(Oxidation (M))|F};[TA]TP[DV]K{M(Oxidation (M))|F};[TP]{I|L}[KT]{M(Oxidation (M))|F}TA;[KT]T{I|L}P{M(Oxidation (M))|F}TA;[TP]{I|L}[KT]T{[MS]|[{M(Oxidation (M))|F}A]};[KT]T{I|L}PT{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}P]T[KT]{M(Oxidation (M))|F}TA 6.6216;6.4209;5.9876;4.5735;4.4159;2.0235;1.8271;1.4561;1.2598;1.2252 -;-;-;-;-;-;-;-;-;- 284 + 1 3.513 65681.7 1.0 462 3305 3767 SUDHL4_400M_050219_1,3769 SUDHL4_400M_050219_1,3769,ATTLPAAYA False False TATPTIMK 17.349045 439.73594969511 7780900.0 3767.0 ENSG00000020577|ENST00000554335|SAMD4A;;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 0.3491965532302856 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3771 17.365 800.0 167010.0 25 0 25266.0 + -1 PRRPKRWCMMW 11 92 521.5923889349899 1561.7553374051697 3 521.5928222537041 MULTI CID FTMS 0 0 0 3770 100037.03125 0.9943909156254797 1 -0.0301628112792968 1 Oxidation (M) _PRRPKRWCMM(Oxidation (M))W_ REV__ENST00000366974.8_1_1:212965321-212970536:+|nuORF;REV__ENST00000532433.5_1_1:212965321-212969949:+|nuORF 0.5059551277355931 0.8727608062196215 5 GSG 3 -1 17.524 0.0 0.0 1.122 0.0 0.0 755.3648507403528 602.2908564633533 1357.6557072037062 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.4247425010840047 0.0 GSG 1.122 - 130 + 1 3.513 106416.3 0.4900000095367431 463 3306 3770 SUDHL4_400M_050219_1,3771 SUDHL4_400M_050219_1,3771,PRRPKRWCMMW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3772 17.379 800.0 155760.0 25 0 19530.0 + 16620 KEFYQFPRYWW 11 116 550.6032194688659 1648.7878290067974 3 550.6029540896416 MULTI CID FTMS 0 0 0 3770 89727.4140625 0.3526841635657778 -12 0.0912208557128906 2 Unmodified _KEFYQFPRYWW_ REV__ENSG00000198964|ENST00000361781|SGMS1;REV__nc|ENSG00000198964|Q86VZ5-2|SGMS1 4.406150317652783 0.8543594311449257 5 GSGGS{I|L}K 7 -1 43.76 0.0 0.0 2.6541 0.0 0.0 842.398825785978 217.05452905826408 1059.453354844242 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.7302046884880937 0.0 GSGGS{I|L}K 2.6541 - 1216 + 1 3.513 99786.1 0.4799999892711639 464 3306 3770 SUDHL4_400M_050219_1,3772 SUDHL4_400M_050219_1,3772,KEFYQFPRYWW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3775 17.392 354.0 152800.0 25 0 13692.0 + 35519 STMSTNGIPR 10 81 540.260923694536 1078.507294455872 2 540.2612182497978 MULTI CID FTMS 0 0 0 3774 180720.53125 0.017415106543867 -43 0.3701972961425781 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 53.40400417844725 0.0601721406801337 5 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 70.61 0.0 0.0 6.547 6.547 86.061 0.0 0.0 0.0 7.269987279362624 3.521825181113627 3.521825181113627 3.521825181113627 0 0.7742275032520141 0.0 0.4247425010840047 0.3494850021680094 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}S[KT]S[QP]P;{[MG]|[TS]}{M(Oxidation (M))|F}[RP][C(Carbamidomethyl (C))R]R;AA[TP][KA]WT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};AA[TP]S[KT]S[WM] 6.547;6.2205;5.6973;5.3708;1.9085;1.0084;0.060473;0.055227 -;+;-;-;-;-;-;- + 244 + 1 3.513 45472.8 1.0 465 3308 3774 SUDHL4_400M_050219_1,3775 SUDHL4_400M_050219_1,3775,STMSTNGIPR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3781 17.413 78.0 745870.0 25 0 81164.0 + 18128 KTLQVKDKA 9 80 515.8165506724823 1029.6185484117646 2 515.8165161013603 MULTI CID FTMS 0 0 0 3780 851122.9375 0.2136156243407829 17 -0.1435432434082031 1 Unmodified _KTLQVKDKA_ ENST00000532980.3_1_11:59055317-59056556:-|nuORF 41.95555342248728 0.0647214845423414 5 KT{I|L}QTQ{I|L}AK 9 5 + 94.779 0.0 0.0 9.2053 9.2053 95.169 0.0 0.0 0.0 79.65350013324773 19.88946545184909 19.88946545184909 9.208187539523747 0 2.048455006504028 0.0 0.4247425010840047 0.872363747448347 KT{I|L}QTQ{I|L}AK;KT{I|L}[AG]TQ{I|L}AK;KT{I|L}QT[AG]{I|L}AK;KT{I|L}[AG]T[AG]{I|L}AK;[{I|L}T]QQ[KT]{I|L}AK;[QT]{I|L}Q[KT]{I|L}AK;[{I|L}T]Q[TA][KG]{I|L}AK;[QT]{I|L}[TA][KG]{I|L}AK;[{I|L}T][AG]Q[KT]{I|L}AK;[{I|L}T]Q[AG][KT]{I|L}AK 9.2053;8.311;8.311;7.4209;4.0748;3.8226;3.6623;3.4101;3.1805;3.1805 -;-;-;-;-;-;-;-;-;- 510 + 1 3.513 47717.0 1.0 466 3313 3780 SUDHL4_400M_050219_1,3781 SUDHL4_400M_050219_1,3781,KTLQVKDKA True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3784 17.421 43.0 1364500.0 25 0 420050.0 + -1 WLGVCLLPSL 10 61 579.323111778711 1156.631670624222 2 579.3230468630791 MULTI CID FTMS 0 0 0 3783 1119249.75 0.5401676643643276 10 -0.0856151580810546 1 Carbamidomethyl (C) _WLGVC(Carbamidomethyl (C))LLPSL_ REV__ENSG00000008710|ENST00000262304|PKD1;REV__nc|ENSG00000008710|P98161-2|PKD1;REV__nc|ENSG00000008710|P98161-3|PKD1 7.289230182591677 0.6929195370588109 5 S{I|L} 2 -1 15.177 0.0 0.0 1.3122 0.0 0.0 938.5044561240252 0.0 938.5044561240252 0.0 8.31063268291958 0.0 0.0 0 0.5 0.0 0.0 0.0 S{I|L} 1.3122 + + 10 + 1 3.513 50325.1 1.0 467 3315 3783 SUDHL4_400M_050219_1,3784 SUDHL4_400M_050219_1,3784,WLGVCLLPSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3785 17.435 800.0 114890.0 25 0 29666.0 17410 KMPSKGKDKK 10 105 573.8378969217127 1145.6612409102254 2 574.3398315310478 MULTI CID FTMS 0 0 0 3783 112794.4765625 0.8414322275978622 -7 0.0332660675048828 2 Unmodified _KMPSKGKDKK_ ENST00000464394.5_3_14:74486142-74495896:+|nuORF 19.361941925380144 0.5226674314761524 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG][{I|L}P]TMKK 10 6 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG][{I|L}P]T + + 26.911 13.701 1.8505 2.349 2.349 53.221 0.0 0.0 0.0 0.0 9.81045001851292 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.2742275032520141 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG][{I|L}P]TMKK 2.349 - 197 + 1 3.513 74945.9 0.6399999856948853 468 3315 3783 SUDHL4_400M_050219_1,3785 SUDHL4_400M_050219_1,3785,KMPSKGKDKK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3786 17.449 800.0 87604.0 25 0 4637.6 + 37970 TMSTNGIPR 9 104 496.74544456555054 991.4763361979012 2 496.7447997927666 MULTI CID FTMS 0 0 0 3783 104093.890625 0.9770032058332674 -8 0.0372505187988281 3 Oxidation (M) _TM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 47.74868867922204 0.0453060283459952 5 [{M(Oxidation (M))|F}T]STN{[VA]|[{I|L}G]}PR 9 0 + 55.142 0.0 0.0 5.5616 5.5616 81.305 0.0 0.0 0.0 7.147642715192504 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.8807196863200843 0.0 0.8494850021680094 0.6747425010840047 + + [{M(Oxidation (M))|F}T]STN{[VA]|[{I|L}G]}PR;[{M(Oxidation (M))|F}T]STN{[VA]|[{I|L}G]}RP;[{M(Oxidation (M))|F}T]STGG{[VA]|[{I|L}G]}PR;[{M(Oxidation (M))|F}T]STGG{[VA]|[{I|L}G]}RP;[{M(Oxidation (M))|F}T]STN{[QV]|[N{I|L}]|[RA]|[KV]}VP;[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}NTSDD;[{M(Oxidation (M))|F}T]STGG{[QV]|[N{I|L}]|[RA]|[KV]}VP;[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}GGTSDD;[PS][R{M(Oxidation (M))|F}][KQ]DD;[{M(Oxidation (M))|F}T][KQ]{[ES]|[DT]|[{I|L}C]}PR 5.5616;5.384;4.6329;4.4553;3.8755;3.554;2.9468;2.6253;1.5284;1.2995 +;-;-;-;-;-;-;-;-;- + 201 + 1 3.513 58981.2 0.6299999952316284 469 3315 3783 SUDHL4_400M_050219_1,3786 SUDHL4_400M_050219_1,3786,TMSTNGIPR True False TMSTNGIPR 17.449269 496.744799792767 672623.8125 3783.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 7.263599395751953 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3789 17.459 152.0 515590.0 25 0 150740.0 + -1 TGVMTSRK 8 99 448.23611629314246 0 448.2360107302666 PEAK CID FTMS 0 0 0 3788 244430.046875 0.58864618012144 25 -0.1922550201416015 1 Oxidation (M) _TGVM(Oxidation (M))TSRK_ REV__ENSG00000077264|ENST00000372007|PAK3;REV__ENSG00000149269|ENST00000356341|PAK1;REV__ENSG00000180370|ENST00000327134|PAK2;REV__nc|ENSG00000077264|O75914-3|PAK3;REV__nc|ENSG00000077264|O75914-4|PAK3;REV__nc|ENSG00000077264|O75914|PAK3;REV__nc|ENSG00000149269|Q13153-2|PAK1 9.347437153973935 0.5488964601725408 5 E 1 -1 8.9794 0.0 0.0 1.0039 0.0 0.0 637.3203333169506 125.07250391177968 762.3928372287303 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 E 1.0039 - 38 + 1 3.475 65696.2 1.0 470 3317 3788 SUDHL4_400M_050219_1,3789 SUDHL4_400M_050219_1,3789,TGVMTSRK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3792 17.467 70.0 615950.0 25 0 53973.0 23153 LSPVAIEQTSL 11 67 386.551007259689 1156.631192379267 3 386.5507690310478 MULTI CID FTMS 0 0 0 3791 524248.34375 0.315561516933232 15 -0.105325698852539 1 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 28.49450938151212 0.4231428536161201 5 QTS{I|L} 4 7 35.891 0.0 0.0 3.103 0.0 0.0 709.3986103389975 0.0 709.3986103389975 0.0 20.406075122407685 0.0 0.0 0 0.5 0.0 1.0 0.0 + QTS{I|L} 3.103 + + 48 1 3.475 39880.7 1.0 471 3319 3791 SUDHL4_400M_050219_1,3792 SUDHL4_400M_050219_1,3792,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3795 17.487 800.0 60601.0 25 0 3258.0 -1 0 73 714.9743684246264 2141.901275874079 3 714.9754516482353 MULTI CID FTMS 0 0 0 3794 55140.3515625 0.3249649456944878 -11 0.0749874114990234 1 5 {[MG]|[TS]}{[CT]|[{M(Oxidation (M))|F}G]}[WM]QSAPST[RD]Q[SG]NW 19 -1 {[MG]|[TS]}{[CT]|[{M(Oxidation (M))|F}G]}[WM]QSA + + 42.616 12.598 1.2656 1.9896 1.9896 52.913 0.0 0.0 0.0 0.0 15.193409159737854 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 1.7104093769761874 {[MG]|[TS]}{[CT]|[{M(Oxidation (M))|F}G]}[WM]QSAPST[RD]Q[SG]NW 1.9896 - 297 + 1 3.475 41350.9 0.5199999809265137 472 3321 3794 SUDHL4_400M_050219_1,3795 SUDHL4_400M_050219_1,3795, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3797 17.495 262.0 302870.0 25 0 43499.0 -1 VKVANGAEMK 10 96 531.7845666067251 1061.55458028025 2 531.7842285037041 MULTI CID FTMS 0 0 0 3796 287829.34375 0.7304137841395923 -11 0.0871658325195312 1 Oxidation (M) _VKVANGAEM(Oxidation (M))K_ ENSG00000244617|ENST00000320256|ASPRV1;nc|ENSG00000244617|Q53RT3|ASPRV1 17.11289562659939 0.5604042439455784 5 KTE[{I|L}P]A[DP]K 9 -1 35.473 0.0 0.0 3.3416 0.0 0.0 63.99702024293817 0.0 63.99702024293817 0.0 29.988278178820813 0.0 0.0 0 0.7302046884880937 0.0 1.305462187404089 0.3054621874040891 KTE[{I|L}P]A[DP]K 3.3416 - 136 + 1 3.475 64876.3 1.0 473 3322 3796 SUDHL4_400M_050219_1,3797 SUDHL4_400M_050219_1,3797,VKVANGAEMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3802 17.511 128.0 421230.0 25 0 126410.0 + 34634 SPMSRTSFG 9 66 485.2265953674252 968.4386378016504 2 485.2266418337822 MULTI CID FTMS 0 0 0 3801 239592.3125 0.0963065446034498 -25 0.2178421020507812 1 Unmodified _SPMSRTSFG_ REV__ENSG00000085511|ENST00000392142|MAP3K4 27.628801355627647 0.1796483985696185 5 SPA{M(Oxidation (M))|F}PHNS{I|L} 9 -1 + 61.218 0.0 0.0 6.3213 6.3213 93.647 0.0 0.0 0.0 47.74491714970311 6.859376408339927 6.859376408339927 22.715299873086607 0 2.211758134947864 2.0 0.3807196863200844 0.3494850021680094 SPA{M(Oxidation (M))|F}PHNS{I|L};SP[WE]HNS{I|L};S[WE]PHNS{I|L};[{M(Oxidation (M))|F}T][PG]PHNS{I|L} 6.3213;3.9757;3.0531;1.7859 -;-;-;- 246 + 1 3.444 48366.6 1.0 474 3326 3801 SUDHL4_400M_050219_1,3802 SUDHL4_400M_050219_1,3802,SPMSRTSFG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3803 17.525 800.0 77868.0 25 0 7499.9 -1 0 60 1071.9579789244003 2141.901404915601 2 1072.462084949017 MULTI CID FTMS 0 0 0 3801 80634.296875 0.661198781740769 -4 0.0188980102539062 2 5 ASQG 4 -1 43.047 0.0 0.0 2.0098 0.0 0.0 1146.5058321333058 649.2226953562448 1795.7285274895507 0.0 0.0 0.0 0.0 0 1.3807196863200843 0.0 0.5 0.3807196863200844 ASQG 2.0098 - 149 + 1 3.444 46752.1 0.5199999809265137 475 3326 3801 SUDHL4_400M_050219_1,3803 SUDHL4_400M_050219_1,3803, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3805 17.53 82.0 544410.0 25 0 55914.0 + 31965 RVFDHKQGTY 10 70 417.547276452992 1249.619999959176 3 417.5472900271416 MULTI CID FTMS 0 0 0 3804 610594.5 0.4234307509644258 14 -0.1145706176757812 1 Unmodified _RVFDHKQGTY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 23.80106514851385 0.4339316747945569 5 [RV]{M(Oxidation (M))|F}DHK{[QG]|[NA]}TY 10 0 + 51.401 0.0 0.0 4.1133 4.1133 88.182 0.0 0.0 0.0 8.922042885466084 37.42152505736741 8.922042885466084 51.40092514408778 0 1.274227503252014 0.0 0.0 0.3252574989159953 + + [RV]{M(Oxidation (M))|F}DHK{[QG]|[NA]}TY 4.1133 + + 62 1 3.444 43884.3 1.0 476 3327 3804 SUDHL4_400M_050219_1,3805 SUDHL4_400M_050219_1,3805,RVFDHKQGTY False True RVFDHKQGTY 17.529683 417.547290027142 15328484.125 3804.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 9.895736376444498 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3806 17.539 499.0 179110.0 25 0 7798.0 + 25487 NELHVQEEK 9 119 563.2807009557721 1124.546848978344 2 563.2812377810478 MULTI CID FTMS 0 0 0 3804 155126.65625 0.2885936720059802 -11 0.0758495330810546 2 Unmodified _NELHVQEEK_ REV__ENSG00000204186|ENST00000374423|ZDBF2 42.312485326615175 0.0627620958981271 5 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK 10 -1 + 93.451 0.0 0.0 8.3101 8.3101 93.902 0.0 0.0 0.0 71.01059828462922 20.026975159433533 20.026975159433533 9.164539485499262 0 2.943672679568534 0.0 0.9143943297944483 0.8494850021680094 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}QHVGEAEK;{[QV]|[N{I|L}]|[RA]|[KV]}HEVDAAEK;[HV]QEVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HVGEAEK;{NN|[MP]|[D{I|L}]|[EV]}QHVDATQV;[HV]DAAVDAAEK;[HV][AG]EVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}QHVDAA{[SA]|[TG]}V 8.3101;7.4951;6.9008;6.5385;6.1566;6.0859;5.9927;5.8255;5.3416;5.3249 -;-;-;-;-;-;-;-;-;- 1886 + 1 3.444 75678.9 1.0 477 3327 3804 SUDHL4_400M_050219_1,3806 SUDHL4_400M_050219_1,3806,NELHVQEEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3809 17.552 348.0 304680.0 25 0 44900.0 + 14810 ILEKKVEKV 9 146 362.5692719542752 1084.6859864630258 3 362.5691711306572 MULTI CID FTMS 0 0 0 3808 189685.125 0.8145027861174783 -8 0.0717735290527343 1 Unmodified _ILEKKVEKV_ ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000436135.1_1_1:158495166-158495214:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1 29.43715596616401 0.1566398223704148 5 {I|L}{I|L}EKKD{I|L}KV 9 2 + 63.483 0.0 0.0 5.8526 5.8526 85.912 0.0 0.0 0.0 44.98274143687247 4.269403919028818 4.269403919028818 5.351132016973494 0 0.5044321917401079 1.5228787452803376 0.5 0.3807196863200844 {I|L}{I|L}EKKD{I|L}KV;{I|L}{I|L}EKKD{I|L}VK;{I|L}{I|L}V{[SA]|[TG]}KD{I|L}KV;{I|L}{I|L}V{[SA]|[TG]}KD{I|L}VK 5.8526;5.3593;4.3999;3.9066 -;-;-;- 209 + 1 3.444 87993.2 1.0 478 3329 3808 SUDHL4_400M_050219_1,3809 SUDHL4_400M_050219_1,3809,ILEKKVEKV False True ILEKKVEKV 17.551595 362.569171130657 885287.5625 3808.0 ENST00000436135.1_1_1:158495166-158495214:+|nuORF;;nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1 4.191134770711263 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3813 17.564 9.6 4652700.0 25 0 1309300.0 + 15948 ITAKDSAKN 9 58 474.26170459794713 946.5088562626944 2 474.2616149783134 MULTI CID FTMS 0 0 0 3812 5539378.0 0.6491894007109774 9 -0.0802688598632812 1 Unmodified _ITAKDSAKN_ REV__ENSG00000108469|ENST00000317905|RECQL5;REV__nc|ENSG00000108469|O94762-2|RECQL5;REV__nc|ENSG00000108469|O94762-3|RECQL5;REV__nc|ENSG00000108469|O94762-4|RECQL5 18.1463463914782 0.3454829746528889 5 [{I|L}T]AQSVSNK 9 -1 + 67.885 0.0 0.0 7.1722 7.1722 92.784 0.0 0.0 0.0 56.91630954681237 7.351905544230348 7.351905544230348 9.208187539523747 0 0.805462187404089 2.0 0.0 0.4247425010840047 [{I|L}T]AQSVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSNK;[{I|L}T]A[AG]SVSGGK 7.1722;6.1993;6.1993;5.2311 -;-;-;- 96 + 1 3.444 44551.5 1.0 479 3332 3812 SUDHL4_400M_050219_1,3813 SUDHL4_400M_050219_1,3813,ITAKDSAKN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3817 17.588 800.0 136670.0 25 0 25415.0 -1 MVQLHMLTQW 10 98 434.8821468786878 0 434.8825256228447 PEAK CID FTMS 0 0 0 3816 78862.0859375 0.5361945434333459 -25 0.1756553649902343 1 Oxidation (M) _M(Oxidation (M))VQLHMLTQW_ ENST00000602628.1_1_18:11857634-11857688:+|nuORF 3.876331618118854 0.3961065659209837 5 P{I|L} 2 -1 5.5732 0.0 0.0 0.64226 0.0 0.0 132.31933983372227 522.2691744440061 654.5885142777283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{I|L} 0.64226 - 16 + 1 3.444 92343.8 0.5899999737739563 480 3335 3816 SUDHL4_400M_050219_1,3817 SUDHL4_400M_050219_1,3817,MVQLHMLTQW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3818 17.593 248.0 291270.0 25 0 91777.0 -1 0 90 400.2175537134493 399.2102772468493 1 400.2161132693291 MULTI CID FTMS 0 0 0 3816 168509.96875 0.1818143595040834 47 -0.7431869506835938 2 5 P 1 -1 10.0 0.0 0.0 2.5049 0.0 0.0 284.1462417627657 0.0 284.1462417627657 0.0 7.235790156711097 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.5049 - 6 + 1 3.444 61040.0 1.0 481 3335 3816 SUDHL4_400M_050219_1,3818 SUDHL4_400M_050219_1,3818, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3821 17.601 55.0 804950.0 25 0 78490.0 36650 TATVLYNP 8 74 439.7361586593354 877.4577643854708 2 439.7357360720634 MULTI CID FTMS 0 0 0 3820 732331.0 0.8468406313945531 12 -0.1022472381591796 1 Unmodified _TATVLYNP_ ENSG00000123191|ENST00000242839|ATP7B;nc|ENSG00000123191|P35670-2|ATP7B;nc|ENSG00000123191|P35670-3|ATP7B;nc|ENSG00000123191|P35670-4|ATP7B 18.13498045792455 0.6430038125133779 5 [VS][HA]{I|L}PTGP 9 7 [VS][HA]{I|L}P + + 31.198 6.6555 1.1013 3.5555 3.5555 55.183 0.0 0.0 0.0 0.0 5.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [VS][HA]{I|L}PTGP 3.5555 - 96 + 1 3.414 42276.1 1.0 482 3337 3820 SUDHL4_400M_050219_1,3821 SUDHL4_400M_050219_1,3821,TATVLYNP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3822 17.615 800.0 123400.0 25 0 9843.4 + 17715 KPVDRENVK 9 119 542.8086662717185 1083.602779610237 2 542.8087646365166 MULTI CID FTMS 0 0 0 3820 95390.0234375 0.6540532163765245 -11 0.0903816223144531 2 Unmodified _KPVDRENVK_ REV__ENSG00000136155|ENST00000349847|SCEL;REV__nc|ENSG00000136155|O95171-2|SCEL;REV__nc|ENSG00000136155|O95171-3|SCEL 17.11289562659939 0.3734572693229295 5 KPT{[ES]|[DT]|[{I|L}C]}NRRP 9 -1 + 41.719 0.0 0.0 3.85 3.85 80.412 0.0 0.0 0.0 28.620057202949063 5.075800817783112 5.075800817783112 6.020599913279611 0 0.4247425010840047 0.0 0.3807196863200844 0.2742275032520141 KPT{[ES]|[DT]|[{I|L}C]}NRRP;KPV{[MS]|[{M(Oxidation (M))|F}A]}NRRP;KPT{[ES]|[DT]|[{I|L}C]}GGRRP;KPV{[MS]|[{M(Oxidation (M))|F}A]}GGRRP;KP[QA][MT]RRP;KPN[WE]{[QV]|[N{I|L}]|[RA]|[KV]}A{I|L};KPV[W{I|L}]EEA{I|L};KPVHH[WP]A{I|L};[WR]{[TV]|[{I|L}S]}NRRP 3.85;3.2944;3.0003;2.4446;1.9819;1.2854;1.2596;0.8188;0.61597 -;-;-;-;-;-;-;-;- 305 + 1 3.414 81148.3 0.6399999856948853 483 3337 3820 SUDHL4_400M_050219_1,3822 SUDHL4_400M_050219_1,3822,KPVDRENVK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3825 17.636 800.0 151250.0 25 0 24057.0 + 14370 IEYGAILF 8 124 463.25503872789074 0 463.2549011111259 PEAK CID FTMS 0 0 0 3824 80051.6796875 0.7423494813030226 22 -0.2911396026611328 1 Unmodified _IEYGAILF_ REV__ENSG00000059377|ENST00000448866|TBXAS1;REV__ENST00000462275.5_1_7:139529186-139716213:+|nuORF;REV__nc|ENSG00000059377|P24557-2|TBXAS1;REV__nc|ENSG00000059377|P24557-3|TBXAS1;REV__nc|ENSG00000059377|P24557-4|TBXAS1 15.768221252438446 0.4767174489346095 5 T 1 -1 5.4846 0.0 0.0 0.59325 0.0 0.0 684.347649621994 136.0771883600219 820.4248379820159 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.59325 - 19 + 1 3.414 100144.3 0.6100000143051147 484 3339 3824 SUDHL4_400M_050219_1,3825 SUDHL4_400M_050219_1,3825,IEYGAILF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3828 17.644 8.8 4492500.0 25 0 441440.0 + 35520 STMSTNGIPR 10 77 540.260923694536 1078.507294455872 2 540.2613403201103 MULTI CID FTMS 0 0 0 3827 5944520.0 0.572842766873774 -10 0.0842189788818359 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 53.40400417844725 0.0601721406801337 5 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 71.107 0.0 0.0 6.5931 6.5931 84.033 0.0 0.0 0.0 7.269987279362624 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.9247425010840048 0.0 0.4247425010840047 0.4247425010840047 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR 6.5931;6.4298;5.7434;5.5801 -;+;-;- + 135 + 1 3.414 38141.9 1.0 485 3341 3827 SUDHL4_400M_050219_1,3828 SUDHL4_400M_050219_1,3828,STMSTNGIPR True False STMSTNGIPR 17.644255 540.26134032011 285692941.6875 3827.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 11.768380165100098 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3829 17.646 48.0 913540.0 25 0 193990.0 + 35815 SVKSFRGP 8 67 439.24833441746927 876.4821159017386 2 439.2478210330009 MULTI CID FTMS 0 0 0 3827 677783.75 0.1600315230464612 -13 0.1006736755371093 2 Unmodified _SVKSFRGP_ REV__ENSG00000117713|ENST00000324856|ARID1A;REV__nc|ENSG00000117713|O14497-2|ARID1A;REV__nc|ENSG00000117713|O14497-3|ARID1A 16.942295170755138 0.6606234159769251 5 {M(Oxidation (M))|F}TGP 4 -1 32.691 0.0 0.0 3.7298 0.0 0.0 456.2896243019323 0.0 456.2896243019323 0.0 24.987737688117235 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}TGP 3.7298 - 100 + 1 3.414 38089.9 1.0 486 3341 3827 SUDHL4_400M_050219_1,3829 SUDHL4_400M_050219_1,3829,SVKSFRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3835 17.677 800.0 253300.0 25 0 35185.0 -1 EKLQKNMK 8 135 517.786715851819 1033.558878770438 2 517.7865478396416 MULTI CID FTMS 0 0 0 3834 233650.6875 0.5023319655541353 6 -0.104461669921875 1 Oxidation (M) _EKLQKNM(Oxidation (M))K_ ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST 32.30548876998284 0.3644845974844379 5 KTT[{I|L}P][WP]K 8 -1 49.544 0.0 0.0 4.7936 0.0 0.0 63.99700312580973 0.0 63.99700312580973 0.0 26.589205760320844 0.0 0.0 0 1.6861818737241734 0.0 1.305462187404089 0.3252574989159953 KTT[{I|L}P][WP]K 4.7936 - 1063 + 1 3.414 155511.2 0.959999978542328 487 3346 3834 SUDHL4_400M_050219_1,3835 SUDHL4_400M_050219_1,3835,EKLQKNMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3837 17.695 800.0 111290.0 25 0 28914.0 + -1 IKKCYFVSL 9 94 579.323111778711 1156.631670624222 2 579.3225585818291 MULTI CID FTMS 0 0 0 3836 83320.8828125 0.0402119783020742 42 -0.6849327087402344 1 Carbamidomethyl (C) _IKKC(Carbamidomethyl (C))YFVSL_ REV__ENSG00000127366|ENST00000247883|TAS2R5 13.042465956692816 0.4836390050082244 5 S{I|L} 2 -1 23.513 0.0 0.0 2.0329 0.0 0.0 938.5069285213622 0.0 938.5069285213622 0.0 9.049471895720984 0.0 0.0 0 0.555462187404089 0.0 0.0 0.0 S{I|L} 2.0329 + + 99 1 3.387 70311.2 0.4799999892711639 488 3347 3836 SUDHL4_400M_050219_1,3837 SUDHL4_400M_050219_1,3837,IKKCYFVSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3840 17.715 800.0 121040.0 25 0 6705.5 + 43563 WYQVEQEK 8 116 555.2670429691481 1108.519533005096 2 555.2641479372978 MULTI CID FTMS 0 0 0 3839 74612.515625 0.7075793300105918 -3 0.0375785827636718 1 Unmodified _WYQVEQEK_ REV__ENST00000170447.11_1_3:12624266-12624749:+|nuORF 38.17557092003332 0.2648138137323925 5 HVDAAEK 7 -1 76.177 0.0 0.0 6.8719 0.0 0.0 340.1413817033138 0.0 340.1413817033138 0.0 62.98918221526151 0.0 0.0 0 2.75 0.0 0.4247425010840047 0.3494850021680094 HVDAAEK 6.8719 - 813 + 1 3.387 77554.2 0.699999988079071 489 3349 3839 SUDHL4_400M_050219_1,3840 SUDHL4_400M_050219_1,3840,WYQVEQEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3841 17.729 800.0 344080.0 25 0 44992.0 + 17683 KPTGARPSAL 10 136 499.29319879199744 996.5718446507948 2 499.2928039431572 MULTI CID FTMS 0 0 0 3839 139376.40625 0.0008667018603664 -15 0.1308975219726562 2 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 37.07464296494664 0.1884581770199685 5 KPTG 4 6 47.423 0.0 0.0 4.7586 0.0 0.0 0.0 610.3319796197874 610.3319796197874 8.114714643307586 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.0 + KPTG 4.7586 + + 899 + 1 3.387 212449.6 0.7599999904632568 490 3349 3839 SUDHL4_400M_050219_1,3841 SUDHL4_400M_050219_1,3841,KPTGARPSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3842 17.743 800.0 144630.0 25 0 6791.5 + -1 GTMLQHSFI 9 147 525.2557017887469 1048.4968506442938 2 525.2561523318291 MULTI CID FTMS 0 0 0 3839 96083.2265625 0.5654679976267973 -6 0.0492897033691406 3 Oxidation (M) _GTM(Oxidation (M))LQHSFI_ REV__ENSG00000118007|ENST00000383202|STAG1;REV__nc|ENSG00000118007|Q8WVM7-2|STAG1 29.081581746732265 0.1611639662936252 5 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR 8 -1 43.514 0.0 0.0 4.1502 0.0 0.0 158.06363009746616 0.0 158.06363009746616 0.0 21.26536957888778 0.0 0.0 0 0.2887254899964357 0.0 0.3807196863200844 0.7134679910804405 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR 4.1502 - 484 + 1 3.387 91490.8 0.6600000262260437 491 3349 3839 SUDHL4_400M_050219_1,3842 SUDHL4_400M_050219_1,3842,GTMLQHSFI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3845 17.752 149.0 356370.0 25 0 49859.0 + -1 LTGWPLTMK 9 76 531.7846527258381 1061.554752518476 2 531.7845947146416 MULTI CID FTMS 0 0 0 3844 329213.65625 0.619312830185263 -7 0.0931453704833984 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 20.453626601364224 0.2830276176381075 5 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}Q 9 -1 + 28.376 0.0 0.0 2.6731 2.6731 82.189 0.0 0.0 0.0 3.237862141609188 9.179987112256216 3.237862141609188 9.220449851406515 0 0.7742275032520141 0.0 0.5 0.25 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}Q;[KT]T{[TV]|[{I|L}S]}HGV[YG];[HT]R[PG][HV]MK;[KT]T{[CP]|[EA]}[{I|L}P][R{M(Oxidation (M))|F}] 2.6731;1.8045;0.75046;0.24331 -;-;-;- 174 1 3.387 44220.6 1.0 492 3351 3844 SUDHL4_400M_050219_1,3845 SUDHL4_400M_050219_1,3845,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3846 17.766 800.0 162150.0 25 0 18108.0 + -1 PMLGALSSMNI 11 64 575.2878803460943 0 575.2878906130791 PEAK CID FTMS 0 0 0 3844 49628.70703125 0.3177022609989189 -6 0.0893268585205078 2 Oxidation (M) _PM(Oxidation (M))LGALSSMNI_ REV__ENSG00000164120|ENST00000296522|HPGD;REV__ENST00000512410.1_1_4:175416602-175443578:-|nuORF;REV__nc|ENSG00000164120|P15428-2|HPGD;REV__nc|ENSG00000164120|P15428-3|HPGD 6.2057823575117 0.47618401536486 5 Q{I|L} 2 -1 9.464 0.0 0.0 0.82398 0.0 0.0 663.3313626435573 241.06499658756096 904.3963592311184 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L} 0.82398 - 45 + 1 3.387 103410.7 0.5899999737739563 493 3351 3844 SUDHL4_400M_050219_1,3846 SUDHL4_400M_050219_1,3846,PMLGALSSMNI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3848 17.77 24.0 1811100.0 25 0 137230.0 + -1 APMSNPHTV 9 79 485.2265953674252 968.4386378016504 2 485.2265807986259 MULTI CID FTMS 0 0 0 3847 2329840.5 0.9365028689398112 1 -0.0188560485839843 1 Oxidation (M) _APM(Oxidation (M))SNPHTV_ REV__ENSG00000068697|ENST00000175091|LAPTM4A 32.30548876998284 0.1201446275138228 5 SPA{M(Oxidation (M))|F}P[HN]S{I|L} 9 -1 + 59.491 0.0 0.0 6.143 6.143 93.831 0.0 0.0 0.0 34.42979712652914 8.438265792396251 8.438265792396251 31.650378042405904 0 1.6677353201839438 2.0 0.4247425010840047 0.3494850021680094 SPA{M(Oxidation (M))|F}P[HN]S{I|L};S[WE]P[HN]S{I|L};S[W{M(Oxidation (M))|F}]{I|L}{[C(Carbamidomethyl (C))G]|[NC]}S{I|L} 6.143;2.8748;0.911 -;-;- 207 + 1 3.358 38022.5 1.0 494 3352 3847 SUDHL4_400M_050219_1,3848 SUDHL4_400M_050219_1,3848,APMSNPHTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3849 17.785 800.0 115600.0 25 0 6217.7 -1 0 69 628.7849017052056 2511.110500954422 4 629.2830688357353 MULTI CID FTMS 0 0 0 3847 76675.09375 0.2132745142830122 -8 0.1122474670410156 2 5 DD 2 -1 25.217 0.0 0.0 1.0042 0.0 0.0 744.3295173090761 1533.7026337465034 2278.03215105558 0.0 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 DD 1.0042 - 37 + 1 3.358 76272.3 0.4300000071525574 495 3352 3847 SUDHL4_400M_050219_1,3849 SUDHL4_400M_050219_1,3849, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3851 17.801 800.0 94922.0 25 0 6608.4 + 14162 IDCYEIIEK 9 99 563.2807009557721 1124.546848978344 2 563.2805053591728 MULTI CID FTMS 0 0 0 3850 115732.09375 0.2153050333943032 15 -0.3202762603759765 1 Unmodified _IDCYEIIEK_ ENSG00000111799|ENST00000322507|COL12A1;nc|ENSG00000111799|Q99715-2|COL12A1 36.12702656103203 0.0967173616627612 5 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK 10 6 + 90.209 0.0 0.0 8.0218 8.0218 93.383 0.0 0.0 0.0 4.884381005764311 12.720340221751371 4.884381005764311 9.164539485499247 0 3.3243923658886185 0.0 0.3494850021680094 0.7887254899964358 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HVDAAEK;{[QV]|[N{I|L}]|[RA]|[KV]}EHVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}QHVWAEK;{[QN]|[E{I|L}]|[KN]}NHVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HVWAEK;{NN|[MP]|[D{I|L}]|[EV]}QHE[VG]AEK;{[QN]|[E{I|L}]|[KN]}GGHVDAAEK;{[QV]|[N{I|L}]|[RA]|[KV]}EHE[VG]AEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HE[VG]AEK 8.0218;7.2069;6.6117;5.8652;5.8398;5.0464;5.0424;5.0249;4.7634;4.2275 -;-;-;-;-;-;-;-;-;- 673 + 1 3.358 65195.0 0.6299999952316284 496 3353 3850 SUDHL4_400M_050219_1,3851 SUDHL4_400M_050219_1,3851,IDCYEIIEK True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3852 17.804 160.0 987270.0 25 0 130830.0 27460 PKAHSKAQ 8 95 433.74585996166974 865.4771669901395 2 433.7459594607353 MULTI CID FTMS 0 0 0 3850 335701.59375 0.0450098219693681 -11 0.1390323638916015 2 Unmodified _PKAHSKAQ_ ENSG00000205669|ENST00000645972|ACOT6;nc|ENSG00000205669|Q3I5F7-2|ACOT6 25.399314129420983 0.5099049743284904 5 [VG]PTQGTAA 9 8 45.442 0.0 0.0 5.2505 0.0 0.0 0.0 80.05137048892811 80.05137048892811 15.955612550363796 0.0 0.0 0.0 0 1.024227503252014 1.6989700043360187 0.3807196863200844 0.0 [VG]PTQGTAA 5.2505 - 667 + 1 3.358 126819.3 1.0 497 3353 3850 SUDHL4_400M_050219_1,3852 SUDHL4_400M_050219_1,3852,PKAHSKAQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3855 17.814 204.0 565980.0 25 0 146540.0 + 13721 HQRLEKVWN 9 96 403.887858637387 1208.6417465123611 3 403.8876830935478 MULTI CID FTMS 0 0 0 3854 165863.65625 0.0381139844631374 131 -1.951007843017578 1 Unmodified _HQRLEKVWN_ REV__ENSG00000124209|ENST00000244040|RAB22A;REV__RAB22A|p.G107D|1|0.42|ENSG00000124209|chr20:58353481-58353481|G/A|missense_variant 6.723162845929126 0.6799819581413107 5 [R{I|L}]QHEP 6 -1 19.486 0.0 0.0 1.6122 0.0 0.0 0.0 445.2192586782304 445.2192586782304 7.70319244238037 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3054621874040891 [R{I|L}]QHEP 1.6122 - 163 1 3.358 92647.0 1.0 498 3355 3854 SUDHL4_400M_050219_1,3855 SUDHL4_400M_050219_1,3855,HQRLEKVWN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3856 17.828 800.0 170040.0 25 0 24245.0 + 29948 QSNDDDDD 8 133 462.1465873877444 0 462.1471130251884 PEAK CID FTMS 0 0 0 3854 84972.2734375 0.7579502908085055 -4 0.0611248016357421 2 Unmodified _QSNDDDDD_ REV__CON__P31096 2.302733041254933 0.5920993303473642 5 N 1 -1 7.3464 0.0 0.0 0.79655 0.0 0.0 718.1881199885763 87.02794824771718 805.2160682362935 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 N 0.79655 + + 40 + 1 3.358 110927.5 0.6299999952316284 499 3355 3854 SUDHL4_400M_050219_1,3856 SUDHL4_400M_050219_1,3856,QSNDDDDD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3858 17.835 242.0 425050.0 25 0 154850.0 1843 ALTTNVSNK 9 90 474.26170459794713 946.5088562626944 2 474.2621032595634 MULTI CID FTMS 0 0 0 3857 241103.453125 0.0282562060656568 33 -0.5348663330078125 1 Unmodified _ALTTNVSNK_ ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-5|OTOF 21.53697664764585 0.2571576504437394 5 [{I|L}T]AQSVSNK 9 4 + 72.647 0.0 0.0 7.6753 7.6753 93.743 0.0 0.0 0.0 47.870696829342165 11.706962271689749 11.706962271689749 9.208187539523747 0 0.8494850021680094 2.0 0.0 0.6861818737241735 [{I|L}T]AQSVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSNK;[{I|L}T]A[AG]SVSGGK;[{I|L}T]AQS[SG][VG]K;{[CT]|[{M(Oxidation (M))|F}G]}[R{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VP 7.6753;6.7024;6.7024;5.7342;5.1566;0.47709 -;-;-;-;-;- 214 + 1 3.358 82451.6 1.0 500 3356 3857 SUDHL4_400M_050219_1,3858 SUDHL4_400M_050219_1,3858,ALTTNVSNK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3861 17.857 800.0 423690.0 25 0 72691.0 17571 KPRGSGPP 8 202 398.22788662463967 0 398.2282897830009 PEAK CID FTMS 0 0 0 3860 123561.53125 0.2137120198765627 -6 0.0723533630371093 1 Unmodified _KPRGSGPP_ ENSG00000196218|ENST00000359596|RYR1;nc|ENSG00000196218|P21817-2|RYR1;nc|ENSG00000196218|P21817-3|RYR1 23.1484247019978 0.3584660196589264 5 PSPSQS 6 6 34.901 0.0 0.0 4.3931 0.0 0.0 128.09468146782598 80.05139337711171 208.1460748449377 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8243923658886187 0.3252574989159953 PSPSQS 4.3931 - 368 + 1 3.336 260316.0 0.7799999713897705 501 3358 3860 SUDHL4_400M_050219_1,3861 SUDHL4_400M_050219_1,3861,KPRGSGPP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3863 17.875 800.0 88369.0 25 0 7032.0 + 31531 RQKELESNY 9 114 583.7935566154141 1165.572560297628 2 583.7955810427666 MULTI CID FTMS 0 0 0 3862 94202.46875 0.9434411021609552 -1 0.0183849334716796 1 Unmodified _RQKELESNY_ ENSG00000135506|ENST00000315970|OS9;nc|ENSG00000135506|Q13438-2|OS9;nc|ENSG00000135506|Q13438-3|OS9;nc|ENSG00000135506|Q13438-4|OS9;nc|ENSG00000135506|Q13438-5|OS9;nc|ENSG00000135506|Q13438-6|OS9;nc|ENSG00000135506|Q13438-7|OS9;nc|ENSG00000135506|Q13438-8|OS9 49.55428908609986 0.0413471690215031 5 {[QN]|[E{I|L}]|[KN]}[W{I|L}]{I|L}ESNY 9 3 + 55.13 0.0 0.0 4.7298 4.7298 82.59 0.0 0.0 0.0 5.440680443502757 10.457574905606748 5.440680443502757 5.440680443502757 0 0.3494850021680094 1.0969100130080565 0.6307196863200843 0.8494850021680094 {[QN]|[E{I|L}]|[KN]}[W{I|L}]{I|L}ESNY;{[{M(Oxidation (M))|F}H]|[RQ]}KE{I|L}ESNY;{[QN]|[E{I|L}]|[KN]}[W{I|L}]{I|L}ESGGY;{[{M(Oxidation (M))|F}H]|[RQ]}KE{I|L}ESGGY;{[{M(Oxidation (M))|F}H]|[RQ]}K[NG]{[TV]|[{I|L}S]}SNY;{[{M(Oxidation (M))|F}H]|[RQ]}[W{I|L}]{[TV]|[{I|L}S]}SNY;{[{M(Oxidation (M))|F}H]|[RQ]}AAR[NS]SNY;[NS][KP]R[C(Carbamidomethyl (C))K]NY;{[{M(Oxidation (M))|F}H]|[RQ]}[HA][YK]SNY;[VP]{[ET]|[MV]}R[NS]SNY 4.7298;4.2631;3.9398;3.473;2.5078;2.3567;2.2156;2.1219;2.0984;2.0471 -;+;-;-;-;-;-;-;-;- + 296 1 3.336 57679.7 0.5400000214576721 502 3359 3862 SUDHL4_400M_050219_1,3863 SUDHL4_400M_050219_1,3863,RQKELESNY True True RQKELESNY 17.875233 583.795581042767 467599.90625 3862.0 nc|ENSG00000135506|Q13438-4|OS9;;nc|ENSG00000135506|Q13438-3|OS9;;nc|ENSG00000135506|Q13438-5|OS9;;nc|ENSG00000135506|Q13438-7|OS9;;nc|ENSG00000135506|Q13438-6|OS9;;nc|ENSG00000135506|Q13438-2|OS9;;nc|ENSG00000135506|Q13438-8|OS9;;ENSG00000135506|ENST00000315970|OS9 6.783722877502441 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3864 17.889 800.0 94446.0 25 0 7674.6 -1 0 117 479.5769436923148 2871.418003354289 6 479.7447082400322 MULTI CID FTMS 0 0 0 3862 18258.140625 0.3096786965689622 -1 0.0183849334716796 2 5 W 1 -1 15.485 0.0 0.0 0.53926 0.0 0.0 2667.327333653897 0.0 2667.327333653897 0.0 5.730640178391191 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.53926 - 72 + 1 3.336 61962.8 0.5299999713897705 503 3359 3862 SUDHL4_400M_050219_1,3864 SUDHL4_400M_050219_1,3864, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3866 17.907 800.0 145260.0 25 0 29863.0 + 28658 PVLNYIPSLKQ 11 74 636.3695369930698 1270.7245210529395 2 636.3694946169853 MULTI CID FTMS 0 0 0 3865 134139.734375 0.6415056060938131 -4 0.0610027313232421 1 Unmodified _PVLNYIPSLKQ_ REV__ENSG00000113600|ENST00000263408|C9 4.406150317652783 0.8543594311449257 5 TPKQQ 5 -1 27.218 0.0 0.0 2.142 0.0 0.0 670.3787624085713 0.0 670.3787624085713 0.0 12.614393726401689 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 TPKQQ 2.142 - 80 1 3.336 90146.4 0.6399999856948853 504 3360 3865 SUDHL4_400M_050219_1,3866 SUDHL4_400M_050219_1,3866,PVLNYIPSLKQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3867 17.911 185.0 428750.0 25 0 154950.0 -1 0 75 490.28380082055145 489.27652435395146 1 490.2847778201103 MULTI CID FTMS 0 0 0 3865 346285.78125 0.8129165399978168 -27 0.324676513671875 2 5 E{[QD]|[EN]|[WG]|[KD]|[RS]} 3 -1 8.9524 0.0 0.0 1.8297 0.0 0.0 99.10566909004062 0.0 99.10566909004062 0.0 8.467874862246562 0.0 0.0 0 0.0 0.0 0.0 0.0 E{[QD]|[EN]|[WG]|[KD]|[RS]} 1.8297 - 4 1 3.336 66205.6 1.0 505 3360 3865 SUDHL4_400M_050219_1,3867 SUDHL4_400M_050219_1,3867, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3869 17.915 20.0 1784400.0 25 0 198900.0 + 35521 STMSTNGIPR 10 59 540.260923694536 1078.507294455872 2 540.2613403201103 MULTI CID FTMS 0 0 0 3868 3318919.5 0.3198271734995125 10 -0.2648239135742187 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 61.60191391372663 0.0323840705564037 5 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 74.105 0.0 0.0 6.8711 6.8711 83.056 0.0 0.0 0.0 7.269987279362624 0.5115252244738144 0.5115252244738144 0.5115252244738144 0 0.9247425010840048 0.0 0.8494850021680094 0.4247425010840047 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR 6.8711;6.8237;6.0213;5.9739 -;+;-;- + 129 + 1 3.336 34213.4 1.0 506 3361 3868 SUDHL4_400M_050219_1,3869 SUDHL4_400M_050219_1,3869,STMSTNGIPR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3870 17.916 26.0 1645100.0 25 0 542370.0 26836 PARTPAPAP 9 65 439.24833441746927 876.4821159017386 2 439.2480956912041 MULTI CID FTMS 0 0 0 3868 2249997.25 0.531246856785589 7 -0.19439697265625 2 Unmodified _PARTPAPAP_ ENSG00000169733|ENST00000310496|RFNG;ENST00000582478.5_1_17:80008786-80009642:-|nuORF 24.020572477871973 0.2255576514309169 5 AP 2 7 30.969 0.0 0.0 3.5333 0.0 0.0 690.3808718605261 0.0 690.3808718605261 0.0 26.365006360318688 0.0 0.0 0 1.0 0.0 0.0 0.0 + AP 3.5333 + + 41 + 1 3.336 37947.2 1.0 507 3361 3868 SUDHL4_400M_050219_1,3870 SUDHL4_400M_050219_1,3870,PARTPAPAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3872 17.932 800.0 467860.0 25 0 51543.0 + -1 MFKHLESK 8 147 518.2669063285065 1034.5192597238129 2 518.2675048708916 MULTI CID FTMS 0 0 0 3871 213154.25 0.9460594057648166 -2 0.027170181274414 1 Oxidation (M) _M(Oxidation (M))FKHLESK_ REV__ENSG00000158480|ENST00000289431|SPATA2 7.910154910731844 0.7763180056447161 5 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T[{I|L}P]WPK 8 -1 + 21.418 0.0 0.0 2.0704 2.0704 78.696 0.0 0.0 0.0 6.259556258252559 4.411225100727588 4.411225100727588 7.7557626122369 0 0.6677353201839438 0.0 0.3807196863200844 0.2059771852360797 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T[{I|L}P]WPK;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T[{I|L}P][KP]W;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EA[{I|L}P]SPK;[KT]T[{I|L}P]AE[{M(Oxidation (M))|F}E];[KT]T{M(Oxidation (M))|F}QWPK;[KA]{[ET]|[MV]}[{I|L}P]T[{M(Oxidation (M))|F}E] 2.0704;1.3207;1.0985;0.68925;0.2209;0.21091 -;-;-;-;-;- 330 + 1 3.336 283468.7 0.8600000143051147 508 3362 3871 SUDHL4_400M_050219_1,3872 SUDHL4_400M_050219_1,3872,MFKHLESK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3873 17.946 800.0 199000.0 25 0 20150.0 + 17709 KPTNKQPNK 9 116 527.8038459301142 1053.5931389270283 2 527.8043701052666 MULTI CID FTMS 0 0 0 3871 132717.046875 0.3879922663661843 -3 0.0593109130859375 2 Unmodified _KPTNKQPNK_ REV__ENSG00000109576|ENST00000337664|AADAT;REV__nc|ENSG00000109576|Q8N5Z0-2|AADAT 24.99096001346401 0.2132109383330889 5 KPTG[Q{I|L}]WPK 9 -1 + 55.826 0.0 0.0 5.2986 5.2986 86.448 0.0 0.0 0.0 36.84675103913189 5.036432085089217 5.036432085089217 8.720291597552816 0 1.7786596949921218 0.0 0.8494850021680094 0.1462566630072955 KPTG[Q{I|L}]WPK;KPTG[Q{I|L}]WKP;KPSA[Q{I|L}]WPK;KPTG[Q{I|L}]T{[NV]|[RG]}P;KPTG[WR]{[NV]|[RG]}P;KPTG[Q{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}SP;KPSA[Q{I|L}]WKP;K{I|L}S[QA]PWPK;[KP]T{[CP]|[EA]}V{[QG]|[NA]}PK;[TP]K{[CP]|[EA]}V{[QG]|[NA]}PK 5.2986;4.471;4.3659;4.2175;4.0503;3.7316;3.5382;3.448;3.4081;3.2858 -;-;-;-;-;-;-;-;-;- 646 + 1 3.336 128484.2 0.7400000095367432 509 3362 3871 SUDHL4_400M_050219_1,3873 SUDHL4_400M_050219_1,3873,KPTNKQPNK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3875 17.963 800.0 114300.0 25 0 55248.0 -1 MPRVECSGTIL 11 53 611.3029054060095 0 611.3024780154228 PEAK CID FTMS 0 0 0 3874 100849.328125 0.8813980871551255 2 -0.0746784210205078 1 Oxidation (M) _M(Oxidation (M))PRVECSGTIL_ nc|ENSG00000160345|Q5BN46-2|PIERCE1 2.9952420565917617 0.4761840153648598 5 KP 2 -1 10.969 0.0 0.0 0.89867 0.0 0.0 224.01711706261105 768.4049776666624 992.4220947292732 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KP 0.89867 - 15 + 1 3.307 71941.3 0.6700000166893005 510 3363 3874 SUDHL4_400M_050219_1,3875 SUDHL4_400M_050219_1,3875,MPRVECSGTIL False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 3876 17.967 226.0 717280.0 25 0 87041.0 + -1 IQRLETMK 8 120 517.786715851819 1033.558878770438 2 517.7864868044853 MULTI CID FTMS 0 0 0 3874 370365.75 0.7962593954337562 23 -0.4026775360107422 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 5 KTT[{I|L}P][WP]K 8 -1 38.919 0.0 0.0 3.7656 0.0 0.0 63.995203173182354 0.0 63.995203173182354 0.0 22.98963451112506 0.0 0.0 0 0.9247425010840048 0.0 1.174742501084005 0.3054621874040891 KTT[{I|L}P][WP]K 3.7656 - 320 + 1 3.307 130039.2 1.0 511 3363 3874 SUDHL4_400M_050219_1,3876 SUDHL4_400M_050219_1,3876,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3877 17.972 242.0 185290.0 25 0 20936.0 + 32576 SATQGRPL 8 79 415.2300574036653 828.4455618741307 2 415.2302734255791 MULTI CID FTMS 0 0 0 3874 151624.296875 0.8542604943184019 -4 0.0888576507568359 3 Unmodified _SATQGRPL_ REV__ENSG00000177943|ENST00000317446|MAMDC4;REV__ENST00000485732.5_1_9:139751390-139753468:+|nuORF;REV__nc|ENSG00000177943|Q6UXC1-3|MAMDC4;REV__nc|ENSG00000177943|Q6UXC1|MAMDC4 13.50788311687929 0.7113601687236069 5 {[SA]|[TG]}TVG 5 -1 16.144 0.0 0.0 1.9487 0.0 0.0 0.0 410.2185775814151 410.2185775814151 9.577118610328348 0.0 0.0 0.0 0 0.3935078169319297 1.6989700043360187 0.3054621874040891 0.0 {[SA]|[TG]}TVG 1.9487 - 46 1 3.307 42058.0 1.0 512 3363 3874 SUDHL4_400M_050219_1,3877 SUDHL4_400M_050219_1,3877,SATQGRPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3878 17.985 800.0 85109.0 25 0 6901.2 37515 TLGWKYEQA 9 92 548.2771656568596 1094.539778380519 2 548.7782470583916 MULTI CID FTMS 0 0 0 3874 85074.375 0.7606434530963011 -2 0.034860610961914 4 Unmodified _TLGWKYEQA_ ENSG00000090238|ENST00000398841|YPEL3;ENSG00000166793|ENST00000300022|YPEL4;ENST00000532314.5_1_11:57413456-57414597:-|nuORF;ENST00000565479.5_1_16:30104033-30107516:-|nuORF;nc|ENSG00000090238|P61236|YPEL3 7.910154910731844 0.6385446671287552 5 W 1 8 13.099 0.0 0.0 1.1968 0.0 0.0 890.4489866098144 0.0 890.4489866098144 0.0 1.8618187372417336 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 1.1968 + + 61 + 1 3.307 57696.7 0.7300000190734863 513 3363 3874 SUDHL4_400M_050219_1,3878 SUDHL4_400M_050219_1,3878,TLGWKYEQA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3880 17.99 0.42 140130000.0 25 0 19886000.0 + 17629 KPTAAFHLL 9 65 499.29319879199744 996.5718446507948 2 499.2934448122978 MULTI CID FTMS 0 0 0 3879 160812400.0 1.0 0 0.0 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 5 KPT 3 -1 43.94 0.0 0.0 4.4091 0.0 0.0 0.0 667.3550087112469 667.3550087112469 28.73835032203424 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 KPT 4.4091 + + 25 + 1 3.307 50979.4 1.0 514 3364 3879 SUDHL4_400M_050219_1,3880 SUDHL4_400M_050219_1,3880,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3881 17.994 240.0 317020.0 25 0 43342.0 + 37956 TMGRVPAPA 9 90 450.2419343527174 898.4693157722348 2 450.2409240603447 MULTI CID FTMS 0 0 0 3879 274080.5 0.3323482274422182 -2 0.0691947937011718 2 Unmodified _TMGRVPAPA_ REV__ENST00000406555.7_1_9:139557386-139563011:+|nuORF 21.74664581756881 0.2544899275067181 5 [MT]G 3 -1 34.749 0.0 0.0 3.8676 0.0 0.0 0.0 606.3395171925342 606.3395171925342 11.684531067637424 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.0 [MT]G 3.8676 + + 127 + 1 3.307 66292.2 1.0 515 3364 3879 SUDHL4_400M_050219_1,3881 SUDHL4_400M_050219_1,3881,TMGRVPAPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3882 18.007 706.0 264720.0 25 0 139800.0 + 24661 MLSRASTIP 9 101 488.2675046516153 0 488.2673217654228 PEAK CID FTMS 0 0 0 3879 271972.84375 0.658207109543209 5 -0.1427726745605468 3 Unmodified _MLSRASTIP_ ENST00000451332.2_1_X:41607478-41607661:+|nuORF 11.640296217721598 0.2934555500198502 5 EP 2 8 6.0835 0.0 0.0 0.62426 0.0 0.0 505.3088607663181 240.09913049869377 745.4079912650119 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 EP 0.62426 - 19 + 1 3.307 149875.2 1.0 516 3364 3879 SUDHL4_400M_050219_1,3882 SUDHL4_400M_050219_1,3882,MLSRASTIP False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3883 18.02 800.0 148210.0 25 0 29060.0 -1 SAVHRTPSCS 10 113 551.2585771906945 1100.502601448189 2 551.2581054568291 MULTI CID FTMS 0 0 0 3879 95262.4921875 0.4463657807096871 -1 0.0396480560302734 4 Carbamidomethyl (C) _SAVHRTPSC(Carbamidomethyl (C))S_ ENST00000316097.12_1_19:1924366-1924684:+|nuORF 16.149105407346934 0.5765757077271437 5 AWDD{[RE]|[WV]}AE 8 -1 33.097 0.0 0.0 3.0074 0.0 0.0 0.0 125.07282434635 125.07282434635 10.71425957786202 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 AWDD{[RE]|[WV]}AE 3.0074 - 217 + 1 3.307 94746.5 0.7699999809265137 517 3364 3879 SUDHL4_400M_050219_1,3883 SUDHL4_400M_050219_1,3883,SAVHRTPSCS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3885 18.035 664.0 224700.0 25 0 34703.0 + -1 LTGWPLTMK 9 102 531.7846527258381 1061.554752518476 2 531.7848388552666 MULTI CID FTMS 0 0 0 3884 309094.9375 0.5814657348044382 7 -0.1888542175292968 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 39.94969957227396 0.0757326808254658 5 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K 9 -1 + 54.874 0.0 0.0 5.1692 5.1692 90.62 0.0 0.0 0.0 0.9358152567282474 37.65031251017078 0.9358152567282474 24.579017741538923 0 1.805462187404089 0.0 0.8494850021680094 0.3252574989159953 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;[PS]{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]T{M(Oxidation (M))|F}K;[KT]T{[TV]|[{I|L}S]}HGV[YG];[PS]{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]TT{[CA]|SS};[HT]R[PG][HV]MK;[PS]{[QV]|[N{I|L}]|[RA]|[KV]}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}K;[KT]T{[CP]|[EA]}[{I|L}P]T{[DS]|[MA]|[CV]|TT};[PS]{[QV]|[N{I|L}]|[RA]|[KV]}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T{[CA]|SS};[HT]VG[{I|L}P]ENVP;[PS]{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]GV[YG] 5.1692;2.8538;2.747;2.175;1.8944;1.5867;1.2576;0.90788;0.8231;0.43159 -;-;-;-;-;-;-;-;-;- 751 1 3.249 121107.5 1.0 518 3365 3884 SUDHL4_400M_050219_1,3885 SUDHL4_400M_050219_1,3885,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3886 18.046 609.0 219920.0 25 0 38413.0 + 17559 KPPTASRAL 9 101 470.7826603026836 939.5507676721672 2 470.7823974490166 MULTI CID FTMS 0 0 0 3884 350972.3125 1.0 0 0.0 2 Unmodified _KPPTASRAL_ ENST00000598846.1_1_1:1635046-1639660:-|nuORF 26.88365393820708 0.1891292719743517 5 KPT 3 6 43.5 0.0 0.0 4.6299 0.0 0.0 0.0 610.3329964794892 610.3329964794892 24.829022044314467 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 KPT 4.6299 - 172 + 1 3.249 108495.1 1.0 519 3365 3884 SUDHL4_400M_050219_1,3886 SUDHL4_400M_050219_1,3886,KPPTASRAL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3887 18.06 800.0 123680.0 25 0 20258.0 -1 0 56 884.4136562790545 1766.812759624909 2 884.9151489138603 MULTI CID FTMS 0 0 0 3884 175401.84375 1.0 0 0.0 3 5 K 1 -1 13.852 0.0 0.0 0.78398 0.0 0.0 770.2388726115676 865.457461739186 1635.6963343507537 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 K 0.78398 - 26 + 1 3.249 72068.5 0.7799999713897705 520 3365 3884 SUDHL4_400M_050219_1,3887 SUDHL4_400M_050219_1,3887, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3889 18.064 13.0 6353900.0 25 0 1057700.0 + 17557 KPPPHPPP 8 84 433.74585996166974 865.4771669901395 2 433.7458679080009 MULTI CID FTMS 0 0 0 3888 4655283.5 0.6241658825962513 2 -0.0455474853515625 1 Unmodified _KPPPHPPP_ REV__ENST00000333751.4_1_17:7255914-7256001:+|nuORF 10.183394434864962 0.7604730176254005 5 [VG]PT 4 -1 36.995 0.0 0.0 4.2745 0.0 0.0 0.0 508.2658785455688 508.2658785455688 3.066884185923655 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 [VG]PT 4.2745 - 151 + 1 3.249 69297.5 1.0 521 3366 3888 SUDHL4_400M_050219_1,3889 SUDHL4_400M_050219_1,3889,KPPPHPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3890 18.078 800.0 217990.0 25 0 13687.0 -1 0 72 628.7849017052056 2511.110500954422 4 628.7843505740166 MULTI CID FTMS 0 0 0 3888 112297.59375 0.3635945024984504 3 -0.0684318542480468 2 5 DD 2 -1 20.969 0.0 0.0 0.83505 0.0 0.0 744.3286261486684 1533.7048768060472 2278.0335029547155 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 DD 0.83505 - 15 + 1 3.249 133045.9 0.9800000190734864 522 3366 3888 SUDHL4_400M_050219_1,3890 SUDHL4_400M_050219_1,3890, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3891 18.085 394.0 150950.0 25 0 37783.0 + 28334 PSAHCPASTV 10 72 485.2265953674252 968.4386378016504 2 485.2248412966728 MULTI CID FTMS 0 0 0 3888 159617.609375 0.0641599067030561 15 -0.2477550506591797 3 Unmodified _PSAHCPASTV_ REV__ENST00000295404.9_1_19:50194996-50204826:+|nuORF 18.1463463914782 0.5430639438673815 5 SP 2 -1 43.271 0.0 0.0 4.4681 0.0 0.0 0.0 781.3335665338499 781.3335665338499 14.089934634871284 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 SP 4.4681 - 85 + 1 3.249 51376.0 1.0 523 3366 3888 SUDHL4_400M_050219_1,3891 SUDHL4_400M_050219_1,3891,PSAHCPASTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3893 18.091 92.0 844700.0 25 0 129000.0 + 12790 GVRSGAGAY 9 75 419.2146656205924 836.4147783079849 2 419.2142516970634 MULTI CID FTMS 0 0 0 3892 523660.8125 0.4528428674613413 -4 0.1391105651855468 1 Unmodified _GVRSGAGAY_ REV__ENSG00000089692|ENST00000203629|LAG3;REV__ENST00000538079.1_1_12:6882155-6887174:+|nuORF;REV__nc|ENSG00000089692|P18627-2|LAG3 10.823927491677226 0.5436922275383211 5 VAY 3 -1 30.177 0.0 0.0 3.6079 0.0 0.0 485.2357350080094 0.0 485.2357350080094 0.0 23.187587626244124 0.0 0.0 0 1.0 0.0 0.0 0.0 VAY 3.6079 - 36 1 3.198 68648.3 1.0 524 3367 3892 SUDHL4_400M_050219_1,3893 SUDHL4_400M_050219_1,3893,GVRSGAGAY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3894 18.105 800.0 57242.0 25 0 6302.8 43911 YGFDQFALYK 10 77 626.3084823756448 0 626.3078491091728 PEAK CID FTMS 0 0 0 3892 97575.109375 1.0 0 0.0 2 Unmodified _YGFDQFALYK_ ENSG00000088053|ENST00000310373|GP6;nc|ENSG00000088053|Q9HCN6-2|GP6;nc|ENSG00000088053|Q9HCN6|GP6 13.042465956692816 0.351733747982019 5 NQEQ 4 9 44.597 0.0 0.0 3.566 0.0 0.0 368.1350178745332 380.2426509032613 748.3776687777945 0.0 0.0 0.0 0.0 0 1.6237125054200234 0.0 0.0 0.6421590589602533 NQEQ 3.566 - 95 + 1 3.198 42712.9 0.6100000143051147 525 3367 3892 SUDHL4_400M_050219_1,3894 SUDHL4_400M_050219_1,3894,YGFDQFALYK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3896 18.114 388.0 470620.0 25 0 94207.0 17572 KPRGSGPP 8 140 398.22788662463967 0 398.2277709841728 PEAK CID FTMS 0 0 0 3895 166123.859375 0.2873278210261846 4 -0.1039962768554687 1 Unmodified _KPRGSGPP_ ENSG00000196218|ENST00000359596|RYR1;nc|ENSG00000196218|P21817-2|RYR1;nc|ENSG00000196218|P21817-3|RYR1 16.942295170755138 0.4635191396245973 5 PTD 3 7 27.976 0.0 0.0 3.5215 0.0 0.0 128.09441110565734 350.19065271549067 478.285063821148 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7302046884880937 0.0 PTD 3.5215 - 414 + 1 3.198 144003.3 1.0 526 3368 3895 SUDHL4_400M_050219_1,3896 SUDHL4_400M_050219_1,3896,KPRGSGPP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3897 18.128 800.0 64819.0 25 0 8813.3 45368 YSTQYGLK 8 79 480.2449828982353 0 480.2449828982353 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _YSTQYGLK_ ENSG00000144283|ENST00000389759|PKP4;ENST00000480171.7_1_2:159519375-159537186:+|nuORF;nc|ENSG00000144283|Q99569-2|PKP4 12.531546534597751 0.5131024102181418 5 QT 2 7 6.1979 0.0 0.0 0.64664 0.0 0.0 479.28029675174565 247.07290064029533 726.353197392041 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 QT 0.64664 - 26 + 1 3.198 47422.4 0.5099999904632568 527 3368 3895 SUDHL4_400M_050219_1,3897 SUDHL4_400M_050219_1,3897,YSTQYGLK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3900 18.148 800.0 46695.0 25 0 8910.0 -1 0 30 1146.144593933259 3435.411952399978 3 1146.816943347454 MULTI CID FTMS 0 0 0 3899 69648.90625 0.1720989998673408 -5 0.1114730834960937 1 5 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.3193 0.0 0.0 1709.5887845306409 1518.70779538079 3228.296579911431 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.3193 - 6 + 1 3.198 38967.5 0.5799999833106995 528 3370 3899 SUDHL4_400M_050219_1,3900 SUDHL4_400M_050219_1,3900, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3901 18.162 800.0 118640.0 25 0 5151.5 -1 LVYAEMEK 8 117 512.7568443826032 1023.4991358320063 2 512.7568237185478 MULTI CID FTMS 0 0 0 3899 119684.0390625 0.193865417165391 -26 0.4779949188232422 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LVYAEMEK_ ENST00000418814.6_2_6:71247997-71248084:+|nuORF 34.10243960390752 0.3329570729325616 5 HVDAAEK 7 -1 73.182 0.0 0.0 7.1502 0.0 0.0 255.1215354419372 0.0 255.1215354419372 0.0 60.99833597274646 0.0 0.0 0 3.06295299324845 0.0 0.7396518287104438 0.3252574989159953 HVDAAEK 7.1502 - 611 + 1 3.198 72595.8 0.8399999737739563 529 3370 3899 SUDHL4_400M_050219_1,3901 SUDHL4_400M_050219_1,3901,LVYAEMEK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3902 18.175 800.0 30664.0 25 0 5442.3 -1 0 26 1174.114494881596 3519.321655244988 3 1175.112597644329 MULTI CID FTMS 0 0 0 3899 73883.4296875 1.0 0 0.0 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.198 28097.4 0.5299999713897705 530 3370 3899 SUDHL4_400M_050219_1,3902 SUDHL4_400M_050219_1,3902, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3904 18.186 364.0 146400.0 25 0 13103.0 + 35522 STMSTNGIPR 10 88 540.260923694536 1078.507294455872 2 540.2610351443291 MULTI CID FTMS 0 0 0 3903 245976.171875 0.0237034564408722 20 -0.207427978515625 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 82.5293158979368 0.0149949422200525 5 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 10 2 + 66.419 0.0 0.0 6.1585 6.1585 82.871 0.0 0.0 0.0 7.269987279362624 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.8494850021680094 0.0 0.805462187404089 1.048455006504028 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}H[DV]{[RE]|[WV]}[HV] 6.1585;5.9952;5.3087;5.1454;1.3181 -;+;-;-;- + 210 + 1 3.18 47745.2 1.0 531 3371 3903 SUDHL4_400M_050219_1,3904 SUDHL4_400M_050219_1,3904,STMSTNGIPR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3905 18.199 800.0 131820.0 25 0 11251.0 + 17899 KQQEIVVSR 9 105 543.8166662880512 1085.6187796429024 2 543.8170043826103 MULTI CID FTMS 0 0 0 3903 115339.6015625 0.5952526850635553 -1 0.0438117980957031 2 Unmodified _KQQEIVVSR_ ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3 60.899326713953855 0.0255841537240836 5 KQQE{I|L}VVSR 9 0 + 93.71 0.0 0.0 8.632 8.632 94.791 0.0 0.0 0.0 16.478174818886373 11.949766032160554 11.949766032160554 9.208187539523747 0 1.1505149978319906 0.0 0.8494850021680094 1.2898166913470483 + + KQQE{I|L}VVSR;K[AG]QE{I|L}VVSR;KQ[AG]E{I|L}VVSR;KQQE{I|L}VVRS;K[AG][AG]E{I|L}VVSR;K[AG]QE{I|L}VVRS;KQ[AG]E{I|L}VVRS;K[AG][AG]E{I|L}VVRS;[AG]KS{[CP]|[EA]}[R{I|L}][RV] 8.632;7.7838;7.7838;7.5312;6.9396;6.683;6.683;5.8389;0.52231 +;-;-;-;-;-;-;-;- + 247 + 1 3.18 83339.6 0.550000011920929 532 3371 3903 SUDHL4_400M_050219_1,3905 SUDHL4_400M_050219_1,3905,KQQEIVVSR True True KQQEIVVSR 18.199416 543.81700438261 797523.25 3903.0 nc|ENSG00000189091|Q15393-2|SF3B3;;ENSG00000189091|ENST00000302516|SF3B3 6.467033386230469 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3906 18.209 539.0 139730.0 25 0 12871.0 + 30415 RAYQQSEAY 9 92 558.2599839800951 1114.50541502699 2 558.2596923708916 MULTI CID FTMS 0 0 0 3903 82531.953125 0.5849815193043364 -9 0.2595100402832031 3 Unmodified _RAYQQSEAY_ ENSG00000064961|ENST00000333651|HMG20B;ENST00000483417.1_1_19:3575543-3576359:+|nuORF;ENST00000486028.1_1_19:3574329-3575756:+|nuORF;ENST00000488973.6_1_19:3574329-3578516:+|nuORF;nc|ENSG00000064961|Q9P0W2-2|HMG20B;nc|ENSG00000064961|Q9P0W2-3|HMG20B 34.40172386719151 0.1061884637610825 5 QQSEAY 6 3 54.87 0.0 0.0 4.9233 0.0 0.0 390.2020741193375 0.0 390.2020741193375 0.0 40.44531259372398 0.0 0.0 0 1.0 0.0 0.5 0.3494850021680094 + QQSEAY 4.9233 + + 320 1 3.18 64129.3 1.0 533 3371 3903 SUDHL4_400M_050219_1,3906 SUDHL4_400M_050219_1,3906,RAYQQSEAY True True RAYQQSEAY 18.208894 558.259692370892 785016.5 3903.0 ENST00000488973.6_1_19:3574329-3578516:+|nuORF;;nc|ENSG00000064961|Q9P0W2-2|HMG20B;;ENST00000483417.1_1_19:3575543-3576359:+|nuORF;;ENSG00000064961|ENST00000333651|HMG20B;;nc|ENSG00000064961|Q9P0W2-3|HMG20B;;ENST00000486028.1_1_19:3574329-3575756:+|nuORF 6.907877604166667 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3908 18.215 206.0 495900.0 25 0 202610.0 -1 0 71 490.28380082055145 489.27652435395146 1 490.2841064333916 MULTI CID FTMS 0 0 0 3907 321578.09375 0.7549144823870633 -15 0.3746261596679687 1 5 {I|L} 1 -1 11.42 0.0 0.0 2.3341 0.0 0.0 358.18142960473114 0.0 358.18142960473114 0.0 -0.1738105312960591 -0.1738105312960591 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.3341 - 22 + 1 3.18 85236.8 1.0 534 3372 3907 SUDHL4_400M_050219_1,3908 SUDHL4_400M_050219_1,3908, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3909 18.224 503.0 140140.0 25 0 20798.0 21436 LPHFPVAP 8 109 439.24833441746927 876.4821159017386 2 439.2480956912041 MULTI CID FTMS 0 0 0 3907 84126.1953125 0.0198630362028647 18 -0.1700019836425781 2 Unmodified _LPHFPVAP_ ENST00000451813.6_2_20:33590304-33590487:-|nuORF 17.086550045450526 0.6584923310065985 5 AP 2 6 27.959 0.0 0.0 3.1899 0.0 0.0 690.3809786720495 0.0 690.3809786720495 0.0 15.741560738425216 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + AP 3.1899 + + 137 + 1 3.18 58736.3 1.0 535 3372 3907 SUDHL4_400M_050219_1,3909 SUDHL4_400M_050219_1,3909,LPHFPVAP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3912 18.244 800.0 131510.0 25 0 11875.0 27074 PEVHLGQWYFI 11 99 463.5713456424933 1387.69220752768 3 463.5711547732353 MULTI CID FTMS 0 0 0 3911 83837.6171875 0.8015043421977793 -1 0.0038490295410156 1 Unmodified _PEVHLGQWYFI_ ENSG00000204444|ENST00000375916|APOM 4.11662792887243 0.8557254166428417 5 {[VA]|[{I|L}G]}[YE]{I|L}G{I|L}G[YT]{M(Oxidation (M))|F}R 12 8 {[VA]|[{I|L}G]}[YE]{I|L} + + 28.18 -0.48635 -0.084537 2.0307 2.0307 52.957 0.0 0.0 0.0 0.0 15.705707356182115 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {[VA]|[{I|L}G]}[YE]{I|L}G{I|L}G[YT]{M(Oxidation (M))|F}R 2.0307 - 259 + 1 3.18 86597.0 0.5400000214576721 536 3374 3911 SUDHL4_400M_050219_1,3912 SUDHL4_400M_050219_1,3912,PEVHLGQWYFI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3913 18.249 249.0 315780.0 25 0 27641.0 + + 43017 VVYALKRQGR 10 89 397.2438171244672 1188.7096219736015 3 397.5781738162041 MULTI CID FTMS 0 0 0 3911 93468.1171875 0.3586885115165455 -8 0.1686000823974609 2 Unmodified _VVYRDRIRL_ ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000158406|ENST00000377727|H4C8;ENSG00000275126|ENST00000618305|H4C13;ENSG00000273542|ENST00000611927|H4C12;ENSG00000197061|ENST00000377803|H4C3;ENSG00000276966|ENST00000615164|H4C5;ENSG00000278637|ENST00000617569|H4C1;ENSG00000270882|ENST00000578186|H4C14;ENSG00000197238|ENST00000355057|H4C11;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276180|ENST00000615353|H4C9;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16 13.614867670302877 0.4681447649821485 5 VV[VP]KPS 7 -1 71.286 0.0 0.0 5.9969 0.0 0.0 0.0 479.23777185611567 479.23777185611567 57.94124931625143 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.8494850021680094 0.4247425010840047 VV[VP]KPS 5.9969 - 245 + 1 3.18 66248.7 1.0 537 3374 3911 SUDHL4_400M_050219_1,3913 SUDHL4_400M_050219_1,3913,VVYRDRIRL False False VVYALKRQGR 18.248756 397.2442 1827561.375 3911.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 2.6889034509658813 3.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3915 18.254 4.6 10455000.0 25 0 1388200.0 + 17630 KPTAAFHLL 9 65 499.29319879199744 996.5718446507948 2 499.2934142947197 MULTI CID FTMS 0 0 0 3914 11994136.0 0.0745846464576114 11 -0.099130630493164 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 5 KPT 3 -1 43.94 0.0 0.0 4.4091 0.0 0.0 0.0 667.3536798210191 667.3536798210191 32.15742599783502 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 KPT 4.4091 + + 12 + 1 3.18 41791.2 1.0 538 3375 3914 SUDHL4_400M_050219_1,3915 SUDHL4_400M_050219_1,3915,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3916 18.263 540.0 157620.0 25 0 18599.0 + 26753 PAARLGEW 8 107 450.2419343527174 898.4693157722348 2 450.2414123415947 MULTI CID FTMS 0 0 0 3914 100293.328125 0.1216150358256954 9 -0.0787334442138671 2 Unmodified _PAARLGEW_ REV__ENST00000391835.1_1_19:50380666-50380804:-|nuORF 10.183394434864962 0.7604730176254005 5 [MT]G 3 -1 31.695 0.0 0.0 3.5276 0.0 0.0 0.0 606.3369234674436 606.3369234674436 16.2101498947667 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [MT]G 3.5276 - 78 + 1 3.18 70823.7 1.0 539 3375 3914 SUDHL4_400M_050219_1,3916 SUDHL4_400M_050219_1,3916,PAARLGEW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3920 18.278 229.0 285990.0 25 0 116020.0 -1 0 68 472.2730975735712 471.2658211069712 1 472.2726318240166 MULTI CID FTMS 0 0 0 3919 189889.484375 0.5658705071157724 10 -0.08746337890625 1 5 P 1 -1 10.278 0.0 0.0 2.1808 0.0 0.0 356.20204502230166 0.0 356.20204502230166 0.0 4.591224280839033 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.1808 - 11 + 1 3.18 58453.0 1.0 540 3378 3919 SUDHL4_400M_050219_1,3920 SUDHL4_400M_050219_1,3920, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3921 18.286 474.0 152910.0 25 0 23977.0 + -1 VSMMMMRM 8 85 532.7048878162899 1063.3952226993797 2 532.7046386599541 MULTI CID FTMS 0 0 0 3919 100451.78125 0.4573274165229363 -11 0.1865577697753906 2 3 Oxidation (M) _VSM(Oxidation (M))M(Oxidation (M))M(Oxidation (M))MRM_ REV__ENST00000529941.1_1_11:124767484-124767703:-|nuORF 5.230669730166228 0.792582437072536 5 [VS]S 3 -1 28.557 0.0 0.0 2.6854 0.0 0.0 0.0 787.2399241976797 787.2399241976797 13.863781092484686 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [VS]S 2.6854 - 65 1 3.18 64003.1 1.0 541 3378 3919 SUDHL4_400M_050219_1,3921 SUDHL4_400M_050219_1,3921,VSMMMMRM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3922 18.293 384.0 349000.0 25 0 106760.0 -1 LLCFVLRYDNY 11 82 492.582117577166 1474.724523331698 3 492.5819579958916 MULTI CID FTMS 0 0 0 3919 177524.65625 0.4372638872040488 -11 0.1865577697753906 3 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))FVLRYDNY_ ENSG00000157837|ENST00000353487|SPPL3;ENST00000392495.7_1_12:121202804-121206971:-|nuORF;ENST00000545209.1_1_12:121202804-121206399:-|nuORF;nc|ENSG00000157837|Q8TCT6-3|SPPL3 4.11662792887243 0.8557254166428417 5 {[VA]|[{I|L}G]}H[HN]GGG{I|L}GS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P 15 -1 {[VA]|[{I|L}G]}H[HN]GGG + + 42.242 24.2 3.3183 2.8644 2.8644 53.916 0.0 0.0 0.0 0.0 18.04135586183716 0.0 0.0 0 1.424742501084005 0.0 0.7059771852360797 0.0 {[VA]|[{I|L}G]}H[HN]GGG{I|L}GS{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}P 2.8644 - 286 + 1 3.18 104584.3 1.0 542 3378 3919 SUDHL4_400M_050219_1,3922 SUDHL4_400M_050219_1,3922,LLCFVLRYDNY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3923 18.299 336.0 263070.0 25 0 106440.0 -1 0 71 502.2848539629301 501.2775774963301 1 502.2830688357353 MULTI CID FTMS 0 0 0 3919 185486.625 0.5534520705411354 10 -0.08746337890625 4 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 3.18 72537.4 1.0 543 3378 3919 SUDHL4_400M_050219_1,3923 SUDHL4_400M_050219_1,3923, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3927 18.315 294.0 208180.0 25 0 31426.0 28080 PPHPPPPPP 9 86 466.7536115497235 931.492670166247 2 467.2588683962822 MULTI CID FTMS 0 0 0 3926 84850.265625 0.4192828266294411 -16 0.2870655059814453 1 Unmodified _PPHPPPPPP_ ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000066855|ENST00000262146|MTFR1;ENSG00000163064|ENST00000295206|EN1;ENSG00000175879|ENST00000313173|HOXD8;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000066855|Q15390-2|MTFR1;nc|ENSG00000175879|P13378-2|HOXD8;REV__nc|ENSG00000182095|O15417-2|TNRC18 28.17323086031832 0.1727213568982648 5 {[TV]|[{I|L}S]}MPPP 6 6 36.604 0.0 0.0 3.9296 0.0 0.0 0.0 306.1446024084419 306.1446024084419 26.225359135601032 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[TV]|[{I|L}S]}MPPP 3.9296 - 68 1 3.18 52326.8 1.0 544 3381 3926 SUDHL4_400M_050219_1,3927 SUDHL4_400M_050219_1,3927,PPHPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3929 18.321 168.0 493720.0 25 0 62666.0 + 27497 PKHATAKN 8 80 433.74585996166974 865.4771669901395 2 433.7456848025322 MULTI CID FTMS 0 0 0 3928 262522.5 0.0351981974704385 18 -0.1496753692626953 1 Unmodified _PKHATAKN_ REV__ENSG00000155966|ENST00000370460|AFF2;REV__nc|ENSG00000155966|P51816-2|AFF2;REV__nc|ENSG00000155966|P51816-3|AFF2;REV__nc|ENSG00000155966|P51816-5|AFF2;REV__nc|ENSG00000155966|P51816-6|AFF2;REV__nc|ENSG00000155966|P51816-7|AFF2 15.847184025352805 0.6768015514314958 5 [VG]PT 4 -1 35.234 0.0 0.0 4.071 0.0 0.0 0.0 508.26630579166255 508.26630579166255 19.035984316004217 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.0 [VG]PT 4.071 - 88 + 1 3.18 72381.7 1.0 545 3382 3928 SUDHL4_400M_050219_1,3929 SUDHL4_400M_050219_1,3929,PKHATAKN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3930 18.323 136.0 332490.0 25 0 43815.0 -1 NQCILISGE 9 79 517.2512240247074 1032.4878951162148 2 517.2510253787041 MULTI CID FTMS 0 0 0 3928 221967.46875 0.3445693605196231 -20 0.3992214202880859 2 Carbamidomethyl (C) _NQC(Carbamidomethyl (C))ILISGE_ ENSG00000145555|ENST00000513610|MYO10 11.640296217721598 0.521594087909532 5 Y 1 -1 16.99 0.0 0.0 1.6455 0.0 0.0 851.4137354255882 0.0 851.4137354255882 0.0 2.284700126913391 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.6455 - 67 + 1 3.18 40620.4 1.0 546 3382 3928 SUDHL4_400M_050219_1,3930 SUDHL4_400M_050219_1,3930,NQCILISGE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3934 18.348 800.0 128540.0 25 0 11998.0 17529 KPLNSLFHL 9 104 534.8116608209589 1067.6087687087177 2 534.8114501833916 MULTI CID FTMS 0 0 0 3933 96984.9375 0.1879695691539577 -20 0.3116168975830078 1 Unmodified _KPLNSLFHL_ ENST00000431189.1_1_7:130652197-130668861:-|nuORF 30.63653989081413 0.1413794767160703 5 KPT 3 7 43.5 0.0 0.0 4.0745 0.0 0.0 0.0 738.3901280803465 738.3901280803465 14.975118260279672 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 KPT 4.0745 - 170 + 1 3.18 83103.0 0.5299999713897705 547 3385 3933 SUDHL4_400M_050219_1,3934 SUDHL4_400M_050219_1,3934,KPLNSLFHL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3936 18.354 122.0 504620.0 25 0 46791.0 + 32557 SARGGGVAY 9 79 419.2146656205924 836.4147783079849 2 419.2147094607353 MULTI CID FTMS 0 0 0 3935 289177.25 0.2500699918128495 15 -0.1205062866210937 1 Unmodified _SARGGGVAY_ ENST00000171111.9_2_19:10610689-10614227:-|nuORF;ENST00000591039.1_1_19:10610689-10613347:-|nuORF;ENST00000591419.2_2_19:10610689-10613347:-|nuORF;ENST00000592055.2_2_19:10610689-10613773:-|nuORF 9.38312468134398 0.5871240394367778 5 VAY 3 6 30.802 0.0 0.0 3.6826 0.0 0.0 485.2357655255875 0.0 485.2357655255875 0.0 23.812281309285623 0.0 0.0 0 1.0 0.0 0.0 0.0 + VAY 3.6826 + + 41 1 3.178 54374.5 1.0 548 3386 3935 SUDHL4_400M_050219_1,3936 SUDHL4_400M_050219_1,3936,SARGGGVAY False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3940 18.379 800.0 125690.0 25 0 43287.0 + -1 CEQPMQSRRKR 11 52 738.3699126818073 1474.7252724304144 2 738.3694946169853 MULTI CID FTMS 0 0 0 3939 64528.4375 0.6708702663105539 -4 0.0308513641357421 1 Carbamidomethyl (C) _C(Carbamidomethyl (C))EQPMQSRRKR_ REV__ENSG00000160685|ENST00000535420|ZBTB7B;REV__nc|ENSG00000160685|O15156-2|ZBTB7B 2.282774691075616 0.8643776557276657 5 R 1 -1 20.485 0.0 0.0 1.389 0.0 0.0 1300.6132556841235 0.0 1300.6132556841235 0.0 17.385606273598313 0.0 0.0 0 0.5 0.0 0.0 0.0 R 1.389 + + 7 + 1 3.178 74813.5 0.4699999988079071 549 3389 3939 SUDHL4_400M_050219_1,3940 SUDHL4_400M_050219_1,3940,CEQPMQSRRKR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3944 18.403 800.0 92007.0 25 0 21255.0 -1 0 45 1146.144593933259 3435.411952399978 3 1146.478808581829 MULTI CID FTMS 0 0 0 3943 261960.84375 0.5781899453023943 12 -0.1469936370849609 1 5 E 1 -1 6.9897 0.0 0.0 0.20346 0.0 0.0 2779.1842356954567 524.1610608514122 3303.3452965468687 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20346 - 25 + 1 3.178 64947.9 0.6100000143051147 550 3392 3943 SUDHL4_400M_050219_1,3944 SUDHL4_400M_050219_1,3944, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3946 18.408 88.0 636390.0 25 0 36743.0 + 2608 ASPHELQDK 9 76 512.7568443826032 1023.4991358320063 2 512.7567016482353 MULTI CID FTMS 0 0 0 3945 589950.0625 0.9556070790156536 -3 0.0242805480957031 1 Unmodified _ASPHELQDK_ REV__ENSG00000164404|ENST00000687138|GDF9 27.628801355627647 0.1796483985696185 5 HVDAAEK 7 -1 73.409 0.0 0.0 7.1723 0.0 0.0 255.1220355052239 0.0 255.1220355052239 0.0 64.11699798914483 0.0 0.0 0 3.024227503252014 0.0 0.5 0.3252574989159953 HVDAAEK 7.1723 - 197 + 1 3.178 47738.3 1.0 551 3393 3945 SUDHL4_400M_050219_1,3946 SUDHL4_400M_050219_1,3946,ASPHELQDK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3949 18.428 800.0 110010.0 25 0 61573.0 + 11004 GASHPAPG 8 54 693.3321520930509 692.3248756264509 1 693.3324462771416 MULTI CID FTMS 0 0 0 3948 119205.328125 0.699676947634335 3 -0.0413970947265625 1 Unmodified _GASHPAPG_ REV__ENSG00000171462|ENST00000372488|DLK2;REV__nc|ENSG00000171462|Q6UY11-2|DLK2 2.889219685676258 0.8067950007271085 5 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}QR 5 -1 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F} + + 31.471 11.695 2.9975 4.5457 4.5457 57.841 0.0 0.0 0.0 0.0 15.791812460476253 0.0 0.0 0 0.5 0.0 0.0 0.7887254899964358 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}QR 4.5457 - 16 + 1 3.178 68066.5 0.5699999928474426 552 3395 3948 SUDHL4_400M_050219_1,3949 SUDHL4_400M_050219_1,3949,GASHPAPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3952 18.446 618.0 158870.0 25 0 14020.0 + 35523 STMSTNGIPR 10 115 540.2611721919177 1078.5077914506353 2 540.2624389529228 MULTI CID FTMS 0 0 0 3951 103377.84375 0.1855223111361358 -10 0.0779705047607421 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 79.59630418116434 0.0173986606250113 5 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 81.222 0.0 0.0 7.5309 7.5309 89.383 0.0 0.0 0.0 7.269987279362624 4.771212547196626 4.771212547196626 4.771212547196626 0 0.8494850021680094 0.0 1.2302046884880935 0.7059771852360797 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;AA[{I|L}V]SNTSE{[MG]|[TS]};{[MG]|[TS]}{M(Oxidation (M))|F}S[KT][{M(Oxidation (M))|F}V]Y;AA[{I|L}V]SGGTSE{[MG]|[TS]};[RP]{[CA]|SS}[KT]SE{[MG]|[TS]};AA[{I|L}V]S{[{M(Oxidation (M))|F}H]|[RQ]}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[HD]T{[QV]|[N{I|L}]|[RA]|[KV]}A[{M(Oxidation (M))|F}V]Y 7.5309;7.0885;6.6812;6.2388;3.4004;3.3742;2.2524;1.0521;0.36444;0.30699 -;+;-;-;-;-;-;-;-;- + 404 + 1 3.178 81430.0 1.0 553 3397 3951 SUDHL4_400M_050219_1,3952 SUDHL4_400M_050219_1,3952,STMSTNGIPR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 3953 18.453 428.0 220890.0 25 0 33145.0 + 31800 RSSPPGHYY 9 112 532.2517164995137 1062.4888800658273 2 532.2494384646416 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _RSSPPGHYY_ ENSG00000109180|ENST00000264312|OCIAD1;ENST00000512981.5_1_4:48833247-48854006:+|nuORF;nc|ENSG00000109180|Q9NX40-2|OCIAD1;nc|ENSG00000109180|Q9NX40-3|OCIAD1;nc|ENSG00000109180|Q9NX40-4|OCIAD1 13.90604991867851 0.4602628045680013 5 HYY 3 6 28.188 0.0 0.0 2.653 0.0 0.0 581.2923279604223 0.0 581.2923279604223 0.0 11.399611681413756 0.0 0.0 0 0.5 0.0 0.0 0.0 + HYY 2.653 + + 324 1 3.178 75616.9 1.0 554 3397 3951 SUDHL4_400M_050219_1,3953 SUDHL4_400M_050219_1,3953,RSSPPGHYY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3956 18.465 269.0 193160.0 25 0 36937.0 + 34635 SPMSRTSFG 9 96 485.2268373450517 968.4391217569034 2 485.2258178591728 MULTI CID FTMS 0 0 0 3955 111092.3359375 0.7881860493062655 -7 0.0704364776611328 1 Unmodified _SPMSRTSFG_ REV__ENSG00000085511|ENST00000392142|MAP3K4 10.073929032068715 0.563993802247229 5 [PS]A{M(Oxidation (M))|F} 4 -1 29.781 0.0 0.0 3.0752 0.0 0.0 0.0 563.2583758772067 563.2583758772067 15.177287669604311 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [PS]A{M(Oxidation (M))|F} 3.0752 - 152 1 3.178 45394.2 1.0 555 3399 3955 SUDHL4_400M_050219_1,3956 SUDHL4_400M_050219_1,3956,SPMSRTSFG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3959 18.479 440.0 185830.0 25 0 20982.0 -1 KFAMFITL 8 102 493.7731029845357 985.5316530358714 2 493.7730895876884 MULTI CID FTMS 0 0 0 3958 150134.65625 0.3545287918784183 -6 0.0565643310546875 1 Oxidation (M) _KFAM(Oxidation (M))FITL_ ENSG00000170522|ENST00000302274|ELOVL6 19.438996006549623 0.6237395211498085 5 [VP]{[WT]|[RM]}VGNT{I|L} 9 -1 + 36.288 0.0 0.0 3.6821 3.6821 76.615 0.0 0.0 0.0 2.498774732165998 9.137342758552698 2.498774732165998 2.498774732165998 0 0.4386218330464625 1.3010299956639813 0.0 0.6549471895720984 [VP]{[WT]|[RM]}VGNT{I|L};{[NV]|[RG]}RNVGNT{I|L};[VP]{[WT]|[RM]}VGGGT{I|L};[VP]{[WT]|[RM]}RNT{I|L};{[NV]|[RG]}RGGVGNT{I|L};{[NV]|[RG]}RNVGGGT{I|L};[KG]P[{I|L}P]{M(Oxidation (M))|F}NT{I|L};[KG]P[NS]RNT{I|L};[PG]K[{I|L}P]{M(Oxidation (M))|F}NT{I|L};[VP]{[WT]|[RM]}RGGT{I|L} 3.6821;3.4285;2.7477;2.6701;2.4942;2.4942;2.2323;1.9269;1.9269;1.7303 -;-;-;-;-;-;-;-;-;- 553 1 3.178 68560.1 1.0 556 3401 3958 SUDHL4_400M_050219_1,3959 SUDHL4_400M_050219_1,3959,KFAMFITL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3960 18.493 800.0 184760.0 25 0 14015.0 + 13360 HLGPEGRSV 9 142 476.2539238174823 950.4932947017646 2 476.2526428103447 MULTI CID FTMS 0 0 0 3958 129351.5859375 0.5803171881318795 -7 0.0605754852294921 2 Unmodified _HLGPEGRSV_ nc|ENSG00000291317|P0DTL5|TMEM276 26.268140514670165 0.1969607489560049 5 H{I|L}GW[RP]W 7 5 + 59.191 0.0 0.0 6.2274 6.2274 85.366 0.0 0.0 0.0 47.77147046989889 2.134023515719079 2.134023515719079 3.723859041996505 0 1.113982988912431 1.6989700043360187 0.0 0.3807196863200844 H{I|L}GW[RP]W;H{I|L}GW[WR]P;H{I|L}GW{[QD]|[EN]|[WG]|[KD]|[RS]}VP;H{I|L}G[EP]{[NV]|[RG]}[VS];H{I|L}G[PA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VP;H{I|L}G[VS]YY{I|L};H{I|L}G{[DA]|[EG]}{[QD]|[EN]|[WG]|[KD]|[RS]}VP;H{I|L}[WP]{[NV]|[RG]}[VS];H{I|L}V[SG]YY{I|L};V[HA]W[RP]W 6.2274;5.8357;5.0041;4.9188;4.4649;4.0876;4.0297;3.9335;3.4671;1.3714 -;-;-;+;-;-;-;-;-;- + 187 + 1 3.178 119258.8 0.5899999737739563 557 3401 3958 SUDHL4_400M_050219_1,3960 SUDHL4_400M_050219_1,3960,HLGPEGRSV False True HLGPEGRSV 18.492525 476.252642810345 1397855.125 3958.0 nc|ENSG00000291317|P0DTL5|TMEM276 5.737868309020996 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 3961 18.497 251.0 173510.0 25 0 35650.0 2717 ATFKSRAP 8 87 439.2480841302421 876.4816153272842 2 439.2475463747978 MULTI CID FTMS 0 0 0 3958 121491.7265625 0.62484328633055 -5 0.0401935577392578 3 Unmodified _ATFKSRAP_ ENSG00000079432|ENST00000681038|CIC 16.942295170755138 0.6606234159769251 5 SAP 3 5 31.22 0.0 0.0 3.5619 0.0 0.0 603.3460695282592 0.0 603.3460695282592 0.0 24.23012235029251 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 SAP 3.5619 - 46 + 1 3.178 38868.1 1.0 558 3401 3958 SUDHL4_400M_050219_1,3961 SUDHL4_400M_050219_1,3961,ATFKSRAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3964 18.506 9.7 5126000.0 25 0 777540.0 + 17631 KPTAAFHLL 9 54 499.2934228913112 996.5722928494224 2 499.2933532595634 MULTI CID FTMS 0 0 0 3963 5641584.5 0.6862844908597131 5 -0.111215591430664 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 5 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3536542851909 667.3536542851909 27.703037561203843 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 19 + 1 3.165 43647.5 1.0 559 3403 3963 SUDHL4_400M_050219_1,3964 SUDHL4_400M_050219_1,3964,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3965 18.52 800.0 68543.0 25 0 7958.0 + -1 FWYNCWCYLPN 11 83 811.8323736907721 1621.650194448344 2 811.8334228396416 MULTI CID FTMS 0 0 0 3963 124420.0 0.7451129008562892 -2 0.0328330993652343 2 2 Carbamidomethyl (C) _FWYNC(Carbamidomethyl (C))WC(Carbamidomethyl (C))YLPN_ REV__ENST00000272542.7_1_2:113404910-113405027:+|nuORF 1.3295316138638542 0.8688751186870782 5 Q{[QS]|[NT]}STQ 6 -1 40.089 0.0 0.0 2.4721 0.0 0.0 944.3547975751004 0.0 944.3547975751004 0.0 -3.851474683181912 -3.851474683181912 0.0 0 0.0 0.0 1.336696871556164 0.7302046884880937 Q{[QS]|[NT]}STQ 2.4721 - 765 + 1 3.165 41168.9 0.5699999928474426 560 3403 3963 SUDHL4_400M_050219_1,3965 SUDHL4_400M_050219_1,3965,FWYNCWCYLPN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3966 18.534 800.0 129570.0 25 0 11315.0 + -1 DNLDCHFQR 9 99 602.7623689772827 1203.5101850213653 2 602.7624389529228 MULTI CID FTMS 0 0 0 3963 113780.3203125 0.7606350592118808 -3 0.0366668701171875 3 Carbamidomethyl (C) _DNLDC(Carbamidomethyl (C))HFQR_ REV__ENSG00000152818|ENST00000367545|UTRN;REV__nc|ENSG00000152818|P46939-2|UTRN 14.838274106304384 0.4350285940865338 5 AEQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 9 -1 92.758 0.0 0.0 7.7072 0.0 0.0 63.99726978833707 0.0 63.99726978833707 0.0 81.52040331657425 0.0 0.0 0 2.1861818737241734 0.0 0.3494850021680094 1.031234684152075 AEQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 7.7072 - 314 + 1 3.165 76727.8 0.5899999737739563 561 3403 3963 SUDHL4_400M_050219_1,3966 SUDHL4_400M_050219_1,3966,DNLDCHFQR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3969 18.542 7.7 6167400.0 25 0 616620.0 + 34152 SLLYDSIVP 9 67 503.77461442276086 1005.5346759123216 2 503.7744628787041 MULTI CID FTMS 0 0 0 3968 6728297.5 0.6541434871461822 -2 0.0361690521240234 1 Unmodified _SLLYDSIVP_ REV__ENSG00000197386|ENST00000355072|HTT 28.486842064014134 0.1687311288560894 5 VT{I|L}DTTQ[KT] 9 -1 + 87.145 0.0 0.0 8.6665 8.6665 94.843 0.0 0.0 0.0 77.2681420562912 8.569233304795034 8.569233304795034 9.208187539523747 0 0.4247425010840047 2.0 0.805462187404089 0.5 VT{I|L}DTTQ[KT];VT{I|L}DTT[AG][KT];VT{I|L}[WM]Q[KT];VT{I|L}DT[YV][VP];VT{I|L}[WM][AG][KT] 8.6665;7.7508;6.4569;6.1587;5.5358 -;-;-;-;- 134 + 1 3.165 41983.9 1.0 562 3405 3968 SUDHL4_400M_050219_1,3969 SUDHL4_400M_050219_1,3969,SLLYDSIVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3970 18.556 800.0 217490.0 25 0 92438.0 -1 0 123 472.2730975735712 471.2658211069712 1 472.2725707888603 MULTI CID FTMS 0 0 0 3968 209157.1875 0.6232882465666219 37 -0.5749320983886719 2 5 M 1 -1 9.3323 0.0 0.0 1.9803 0.0 0.0 322.21500736361025 0.0 322.21500736361025 0.0 0.0629456365401015 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.9803 - 34 + 1 3.165 137733.3 0.800000011920929 563 3405 3968 SUDHL4_400M_050219_1,3970 SUDHL4_400M_050219_1,3970, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3972 18.562 172.0 424510.0 25 0 227140.0 -1 0 65 411.2256144398922 410.21833797329225 1 411.2252380251884 MULTI CID FTMS 0 0 0 3971 311246.40625 0.5242451440706505 10 -0.2236137390136718 1 5 [TP]{[HG]|PP} 4 -1 + 7.4473 0.0 0.0 1.8154 1.8154 78.37 0.0 0.0 0.0 7.447274948966936 5.206963425791123 5.206963425791123 7.447274948966936 0 0.0 0.0 0.0 0.0 [TP]{[HG]|PP} 1.8154 - 2 + 1 3.165 61610.7 1.0 564 3406 3971 SUDHL4_400M_050219_1,3972 SUDHL4_400M_050219_1,3972, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3973 18.576 800.0 67942.0 25 0 3756.5 -1 0 105 711.3105413948231 2841.213059712892 4 711.5623657107353 MULTI CID FTMS 0 0 0 3971 111233.75 0.8866273820071543 -2 0.022348403930664 2 5 [NS]DY 4 -1 14.724 0.0 0.0 0.51821 0.0 0.0 0.0 2359.023947734629 2359.023947734629 0.9112906329627162 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6307196863200843 [NS]DY 0.51821 - 477 1 3.165 46843.8 0.4799999892711639 565 3406 3971 SUDHL4_400M_050219_1,3973 SUDHL4_400M_050219_1,3973, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3974 18.584 448.0 134330.0 25 0 10714.0 12340 GTAAGEKLK 9 115 437.7535026422912 0 437.7532531619072 PEAK CID FTMS 0 0 0 3971 88972.9765625 0.9784511273647786 2 -0.0564765930175781 3 Unmodified _GTAAGEKLK_ ENSG00000131721|ENST00000371388|RHOXF2;ENSG00000203989|ENST00000371402|RHOXF2B 21.53697664764585 0.1871382778112851 5 AQV 3 8 24.737 0.0 0.0 2.832 0.0 0.0 158.06998028282607 414.23699325217547 572.3069735350016 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.5 AQV 2.832 - 48 + 1 3.165 54636.1 1.0 566 3406 3971 SUDHL4_400M_050219_1,3974 SUDHL4_400M_050219_1,3974,GTAAGEKLK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3976 18.589 76.0 640440.0 25 0 42487.0 + 26243 NQKPPSAEY 9 82 517.2512240247074 1032.4878951162148 2 517.2507202029228 MULTI CID FTMS 0 0 0 3975 424032.8125 0.6582438222378577 5 -0.0672168731689453 1 Unmodified _NQKPPSAEY_ ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1 14.838274106304384 0.4350285940865338 5 GGQ 3 9 18.261 0.0 0.0 1.7686 0.0 0.0 0.0 787.3627632404913 787.3627632404913 1.2713662742717773 0.0 0.0 0.0 0 0.5 1.154901959985743 0.0 0.3807196863200844 GGQ 1.7686 - 68 1 3.147 45117.6 1.0 567 3407 3975 SUDHL4_400M_050219_1,3976 SUDHL4_400M_050219_1,3976,NQKPPSAEY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3977 18.593 195.0 313080.0 25 0 47199.0 + 28081 PPHPPPPPP 9 78 466.7536115497235 931.492670166247 2 466.7531921267509 MULTI CID FTMS 0 0 0 3975 264990.84375 0.8055582207871982 5 -0.0672168731689453 2 Unmodified _PPHPPPPPP_ nc|ENSG00000066855|Q15390-2|MTFR1;nc|ENSG00000048991|Q15032|R3HDM1;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000175879|ENST00000313173|HOXD8;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000175879|P13378-2|HOXD8;nc|ENSG00000048991|Q15032-2|R3HDM1;ENSG00000066855|ENST00000262146|MTFR1;ENSG00000163064|ENST00000295206|EN1 56.04830969593885 0.0282699710924866 5 {[HG]|PP}HPPPPPP 9 0 + 45.908 0.0 0.0 4.9284 4.9284 88.745 0.0 0.0 0.0 2.922152515121219 34.313725836429896 2.922152515121219 13.821457414888052 0 1.548455006504028 0.0 0.0 0.0 + + {[HG]|PP}HPPPPPP;{[NV]|[RG]}{[QS]|[NT]}PPPPP;{[HG]|PP}H[YK]PPP;{[HG]|PP}HP[YK]PP;{[NV]|[RG]}{[QS]|[NT]}[YK]PP 4.9284;3.4446;2.0871;1.5504;0.066576 +;-;-;-;- + 81 1 3.147 53118.2 1.0 568 3407 3975 SUDHL4_400M_050219_1,3977 SUDHL4_400M_050219_1,3977,PPHPPPPPP False False PPHPPPPPP 18.592856 466.753192126751 3202273.75 3975.0 nc|ENSG00000066855|Q15390-2|MTFR1;;nc|ENSG00000048991|Q15032|R3HDM1;;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;;ENSG00000048991|ENST00000683871|R3HDM1;;ENSG00000175879|ENST00000313173|HOXD8;;nc|ENSG00000048991|Q15032-3|R3HDM1;;nc|ENSG00000048991|Q15032-4|R3HDM1;;nc|ENSG00000175879|P13378-2|HOXD8;;nc|ENSG00000048991|Q15032-2|R3HDM1;;ENSG00000066855|ENST00000262146|MTFR1;;ENSG00000163064|ENST00000295206|EN1 0.5993808805942535 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3978 18.599 322.0 233480.0 25 0 14233.0 28337 PSAHPVPTY 9 123 484.74407436944887 967.4735958056978 2 484.7444946169853 MULTI CID FTMS 0 0 0 3975 133560.171875 0.934540158977367 3 -0.0491657257080078 3 Unmodified _PSAHPVPTY_ ENSG00000187867|ENST00000669674|PALM3;nc|ENSG00000187867|A6NDB9|PALM3 42.09456458481378 0.0639583784996157 5 [PS]VTVMATY 9 5 + 64.447 0.0 0.0 6.6614 6.6614 90.197 0.0 0.0 0.0 8.750612633917001 16.478174818886373 8.750612633917001 8.750612633917001 0 1.0 1.3010299956639813 0.7614393726401688 0.0 [PS]VTVMATY;[VG]{NN|[MP]|[D{I|L}]|[EV]}VMATY;[PS]A{M(Oxidation (M))|F}V{I|L}ATY;[PS]VTVVG{M(Oxidation (M))|F}Y;[PG]T{M(Oxidation (M))|F}V{I|L}ATY;[PA]S{M(Oxidation (M))|F}V{I|L}ATY;[VG]G[WK]SATY;[VG][MD]V{I|L}ATY;[VG]{NN|[MP]|[D{I|L}]|[EV]}VVG{M(Oxidation (M))|F}Y;[PS]VTV[R{M(Oxidation (M))|F}]Y 6.6614;5.7569;5.5103;4.7174;4.1444;4.1338;3.9832;3.979;3.813;3.7657 -;-;-;-;-;-;-;-;-;- 863 1 3.147 62683.4 1.0 569 3407 3975 SUDHL4_400M_050219_1,3978 SUDHL4_400M_050219_1,3978,PSAHPVPTY True False GRISNSATY 18.598695 484.744494616985 634966.5625 3975.0 nc|ENSG00000163110|Q96HC4-6|PDLIM5;;ENSG00000163110|ENST00000317968|PDLIM5;;nc|ENSG00000163110|Q96HC4-7|PDLIM5;;nc|ENSG00000163110|Q96HC4-4|PDLIM5 1.7302661736806233 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3979 18.613 800.0 98988.0 25 0 13664.0 + 19210 LEGEESRMSGE 11 86 612.2642101363509 1222.5138673395018 2 612.2645751833916 MULTI CID FTMS 0 0 0 3975 94834.1484375 0.5361380846395992 -5 0.086313247680664 4 Unmodified _LEGEESRMSGE_ CON__ENSEMBL:ENSBTAP00000038253;CON__P04264;CON__Q7Z794;ENSG00000167768|ENST00000252244|KRT1;ENSG00000189182|ENST00000341809|KRT77 68.75988807550267 0.0359983986270074 5 {I|L}EGEESS{[TV]|[{I|L}S]}SGE 12 3 + 99.846 0.0 0.0 8.1673 8.1673 85.357 0.0 0.0 0.0 71.55246292209256 17.284992420975186 17.284992420975186 0.591214521186572 0 1.274227503252014 2.0 1.9124379954164592 0.0 {I|L}EGEESS{[TV]|[{I|L}S]}SGE;{I|L}EGEES{[WT]|[RM]}SGE;{I|L}EWESP[YN]GE;{I|L}EWES{[WT]|[RM]}SGE;{I|L}WEESP[YN]GE;{I|L}WEES{[WT]|[RM]}SGE;{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H]SP[YN]GE;{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))H]S{[WT]|[RM]}SGE;{[QD]|[EN]|[WG]|[KD]|[RS]}[{M(Oxidation (M))|F}T]SSEEG[HS];{[CT]|[{M(Oxidation (M))|F}G]}[HS]ESS{[TV]|[{I|L}S]}SGE 8.1673;8.1189;7.582;7.4798;5.3524;5.2502;3.6558;3.5536;2.835;2.219 -;+;-;-;-;-;-;-;-;- + 263 + 1 3.147 66382.7 0.4900000095367431 570 3407 3975 SUDHL4_400M_050219_1,3979 SUDHL4_400M_050219_1,3979,LEGEESRMSGE True True LEGEESRMSGE 18.612533 612.264575183392 611951.4375 3975.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253 8.135636647542318 2.0 True 11.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 3981 18.618 167.0 443000.0 25 0 44106.0 + -1 KPCLLLDPL 9 68 534.8116608209589 1067.6087687087177 2 534.8116943240166 MULTI CID FTMS 0 0 0 3980 461713.78125 0.8948620556053581 3 -0.0343704223632812 1 Carbamidomethyl (C) _KPC(Carbamidomethyl (C))LLLDPL_ REV__ENST00000478182.5_1_3:119246651-119248702:-|nuORF 23.1484247019978 0.2366544122328345 5 KPTG 4 -1 49.24 0.0 0.0 4.6122 0.0 0.0 0.0 681.3682955377561 681.3682955377561 37.0217596488785 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 KPTG 4.6122 - 40 + 1 3.147 66252.4 1.0 571 3408 3980 SUDHL4_400M_050219_1,3981 SUDHL4_400M_050219_1,3981,KPCLLLDPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3982 18.622 204.0 481470.0 25 0 49509.0 + 27498 PKHATAKN 8 98 433.745505139538 865.476457345876 2 433.7458679080009 MULTI CID FTMS 0 0 0 3980 211995.59375 0.5501558496431089 3 -0.0343704223632812 2 Unmodified _PKHATAKN_ REV__ENSG00000155966|ENST00000370460|AFF2;REV__nc|ENSG00000155966|P51816-2|AFF2;REV__nc|ENSG00000155966|P51816-3|AFF2;REV__nc|ENSG00000155966|P51816-5|AFF2;REV__nc|ENSG00000155966|P51816-6|AFF2;REV__nc|ENSG00000155966|P51816-7|AFF2 21.74664581756881 0.5868176546531598 5 [VG]PTP 5 -1 36.254 0.0 0.0 4.189 0.0 0.0 0.0 411.2042383298433 411.2042383298433 2.282249591245389 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.0 [VG]PTP 4.189 - 123 + 1 3.147 79098.0 1.0 572 3408 3980 SUDHL4_400M_050219_1,3982 SUDHL4_400M_050219_1,3982,PKHATAKN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3983 18.629 382.0 224610.0 25 0 18400.0 -1 0 58 628.7853593371653 2511.112331482261 4 628.7863036990166 MULTI CID FTMS 0 0 0 3980 124833.90625 0.3540844356317692 -7 0.1440486907958984 3 5 DT 2 -1 23.271 0.0 0.0 0.92673 0.0 0.0 1667.746822342165 624.2846163385374 2292.031438680702 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 DT 0.92673 - 11 + 1 3.147 70961.6 1.0 573 3408 3980 SUDHL4_400M_050219_1,3983 SUDHL4_400M_050219_1,3983, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3986 18.638 128.0 611500.0 25 0 60602.0 + -1 NQGLLSKMK 9 104 517.7870889479897 1033.5596249627793 2 517.7869140505791 MULTI CID FTMS 0 0 0 3985 278520.09375 0.7261720003976059 12 -0.2546634674072265 1 Oxidation (M) _NQGLLSKM(Oxidation (M))K_ REV__ENSG00000167632|ENST00000438773|TRAPPC9;REV__nc|ENSG00000167632|Q96Q05-2|TRAPPC9;REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9 14.838274106304384 0.4350285940865338 5 KTT[{I|L}P]WPK 8 -1 31.635 0.0 0.0 3.0608 0.0 0.0 63.99768120175526 0.0 63.99768120175526 0.0 14.645096999615744 0.0 0.0 0 1.048455006504028 0.0 0.9247425010840048 0.2059771852360797 KTT[{I|L}P]WPK 3.0608 - 277 + 1 3.147 63644.8 1.0 574 3410 3985 SUDHL4_400M_050219_1,3986 SUDHL4_400M_050219_1,3986,NQGLLSKMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3987 18.647 514.0 204930.0 25 0 18159.0 + 11035 GAYREHPYGRY 11 108 456.88631170597984 1367.6371057181395 3 457.2193481326103 MULTI CID FTMS 0 0 0 3985 74246.8515625 0.7968377514538881 -4 0.0767345428466796 2 Unmodified _GAYREHPYGRY_ ENSG00000121774|ENST00000327300|KHDRBS1;ENST00000307714.12_1_1:32503693-32508222:+|nuORF;nc|ENSG00000121774|Q07666-2|KHDRBS1;nc|ENSG00000121774|Q07666-3|KHDRBS1 10.52747425323666 0.8161629707409286 5 [AG][{M(Oxidation (M))|F}V]{[DS]|[MA]|[CV]|TT}HPTY{M(Oxidation (M))|F}Q 12 8 [AG][{M(Oxidation (M))|F}V]{[DS]|[MA]|[CV]|TT}H + + 24.187 -1.026 -0.14384 1.7685 1.7685 52.71 0.0 0.0 0.0 0.0 6.5177443155307095 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.1803115997617927 [AG][{M(Oxidation (M))|F}V]{[DS]|[MA]|[CV]|TT}HPTY{M(Oxidation (M))|F}Q 1.7685 - 495 + 1 3.147 90909.2 1.0 575 3410 3985 SUDHL4_400M_050219_1,3987 SUDHL4_400M_050219_1,3987,GAYREHPYGRY False True GAYREHPYGRY 18.646889 456.8853 624687.125 3985.0 nc|ENSG00000121774|Q07666-3|KHDRBS1;;ENST00000307714.12_1_1:32503693-32508222:+|nuORF;;ENSG00000121774|ENST00000327300|KHDRBS1;;nc|ENSG00000121774|Q07666-2|KHDRBS1 6.964047908782959 3.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3990 18.657 209.0 278200.0 25 0 61503.0 + 42 AAAPSVARS 9 82 415.23005096678605 828.4455490003721 2 415.2303954958916 MULTI CID FTMS 0 0 0 3989 102235.75 0.9527363645901064 1 -0.0203323364257812 1 Unmodified _AAAPSVARS_ REV__ENSG00000072195|ENST00000312358|SPEG;REV__nc|ENSG00000072195|Q15772-1|SPEG 20.453626601364224 0.2830276176381075 5 AAA 3 -1 26.963 0.0 0.0 3.2546 0.0 0.0 0.0 612.3115517682033 612.3115517682033 16.505149978319906 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 AAA 3.2546 + + 68 1 3.147 50390.5 1.0 576 3412 3989 SUDHL4_400M_050219_1,3990 SUDHL4_400M_050219_1,3990,AAAPSVARS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 3991 18.671 800.0 28140.0 25 0 7533.4 -1 0 30 1146.144133355469 3435.410570666607 3 1146.480395495892 MULTI CID FTMS 0 0 0 3989 73383.1484375 0.3509089482679717 -3 0.0218524932861328 2 5 {M(Oxidation (M))|F}G 2 -1 8.5835 0.0 0.0 0.24985 0.0 0.0 1709.5936283832073 1518.7085665338502 3228.302194917057 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.24985 - 7 + 1 3.147 28346.5 0.4199999868869781 577 3412 3989 SUDHL4_400M_050219_1,3991 SUDHL4_400M_050219_1,3991, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3994 18.691 800.0 110950.0 25 0 9747.6 -1 0 54 838.0458524200392 2511.1157278603173 3 838.3804199099541 MULTI CID FTMS 0 0 0 3993 49704.35546875 0.6161397004562149 -1 0.00396728515625 1 5 DD 2 -1 20.261 0.0 0.0 0.80685 0.0 0.0 1667.7490994268449 610.2885225885374 2278.037622015382 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 DD 0.80685 - 17 + 1 3.132 69498.9 0.4799999892711639 578 3414 3993 SUDHL4_400M_050219_1,3994 SUDHL4_400M_050219_1,3994, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3995 18.698 379.0 420280.0 25 0 67755.0 + 14773 ILDKKVEKV 9 146 357.89727894477073 1070.6700074345122 3 357.8969604372978 MULTI CID FTMS 0 0 0 3993 93455.640625 0.0172068481930217 -3 0.028238296508789 2 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 39.21299971606389 0.0797768173001226 5 {I|L}{I|L}DKKVEKV 9 0 + 88.999 0.0 0.0 8.3124 8.3124 89.33 0.0 0.0 0.0 36.47817481888636 3.67931555708239 3.67931555708239 3.67931555708239 0 0.3054621874040891 2.0 0.9559771852360796 0.899649864804614 + + {I|L}{I|L}DKKVEKV;{I|L}{I|L}DKKVEVK;{I|L}{I|L}V[SG]KVEKV;{I|L}{I|L}V[SG]KVEVK;{I|L}{I|L}DVKKEKV;{I|L}VEKKVEKV;{I|L}{I|L}DKKV[K{I|L}]D;{I|L}{I|L}VDKKEKV;{I|L}{I|L}DVKKEVK;{I|L}{I|L}DKKV{[VA]|[{I|L}G]}SV 8.3124;7.9688;7.2868;6.9431;6.1933;6.1102;6.0509;6.0277;5.8496;5.8414 +;-;-;-;-;-;-;-;-;- + 987 + 1 3.132 134058.7 1.0 579 3414 3993 SUDHL4_400M_050219_1,3995 SUDHL4_400M_050219_1,3995,ILDKKVEKV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3996 18.702 209.0 270420.0 25 0 23349.0 -1 0 87 438.2004530969988 437.1931766303988 1 438.1998474001884 MULTI CID FTMS 0 0 0 3993 174388.796875 0.4775879216444635 -2 0.0242996215820312 3 5 P 1 -1 13.495 0.0 0.0 3.0867 0.0 0.0 322.1292632166277 0.0 322.1292632166277 0.0 3.580016718173997 0.0 0.0 0 0.0 0.0 0.0 0.0 P 3.0867 - 6 + 1 3.132 49842.0 1.0 580 3414 3993 SUDHL4_400M_050219_1,3996 SUDHL4_400M_050219_1,3996, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 3997 18.716 800.0 141590.0 25 0 26629.0 + 30995 RIYNDDKNTY 10 103 434.8821468786878 0 434.8822204470634 PEAK CID FTMS 0 0 0 3993 106339.6796875 0.7230186130769604 54 -0.7490596771240234 4 Unmodified _RLDTFSYSTNV_ ENSG00000115524|ENST00000335508|SF3B1 5.296884461304476 0.47618401536486 5 D 1 10 3.9794 0.0 0.0 0.45859 0.0 0.0 91.40038887280691 658.2945650690061 749.6949539418131 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.45859 + + 13 + 1 3.132 94759.9 0.5600000023841858 581 3414 3993 SUDHL4_400M_050219_1,3997 SUDHL4_400M_050219_1,3997,RLDTFSYSTNV False False RIYNDDKNTY 18.715971 434.882220447063 170872.1875 3993.0 ENSG00000115524|ENST00000335508|SF3B1 1.911310195922852 3.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 3999 18.723 246.0 292590.0 25 0 73171.0 -1 STMSTNGIPR 10 80 540.2611721919177 1078.5077914506353 2 540.2612792849541 MULTI CID FTMS 0 0 0 3998 66748.625 0.1197873618365081 8 -0.1754703521728515 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 10.799506525563784 0.666336781075408 5 NTS[WM] 5 -1 12.932 0.0 0.0 1.199 0.0 0.0 441.2697621076188 0.0 441.2697621076188 0.0 1.3380312008851547 0.0 0.0 0 0.0 0.0 0.0 0.0 NTS[WM] 1.199 - 58 1 3.132 60571.1 1.0 582 3415 3998 SUDHL4_400M_050219_1,3999 SUDHL4_400M_050219_1,3999,STMSTNGIPR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4000 18.73 396.0 227440.0 25 0 40519.0 + 31801 RSSPPGHYY 9 85 532.2517164995137 1062.4888800658273 2 532.2521850466728 MULTI CID FTMS 0 0 0 3998 108229.9375 0.6310011448125471 3 -0.1281566619873047 2 Unmodified _RSSPPGHYY_ ENSG00000109180|ENST00000264312|OCIAD1;ENST00000512981.5_1_4:48833247-48854006:+|nuORF;nc|ENSG00000109180|Q9NX40-2|OCIAD1;nc|ENSG00000109180|Q9NX40-3|OCIAD1;nc|ENSG00000109180|Q9NX40-4|OCIAD1 12.240655878213236 0.5053430591993562 5 HYY 3 6 34.737 0.0 0.0 3.2694 0.0 0.0 581.291940401267 0.0 581.291940401267 0.0 23.47799965699611 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.0 + HYY 3.2694 + + 45 1 3.132 72765.9 1.0 583 3415 3998 SUDHL4_400M_050219_1,4000 SUDHL4_400M_050219_1,4000,RSSPPGHYY False True RSSPPGHYY 18.730115 532.252185046673 1762785.125 3998.0 nc|ENSG00000109180|Q9NX40-2|OCIAD1;;ENSG00000109180|ENST00000264312|OCIAD1;;ENST00000512981.5_1_4:48833247-48854006:+|nuORF;;nc|ENSG00000109180|Q9NX40-3|OCIAD1;;nc|ENSG00000109180|Q9NX40-4|OCIAD1 5.347096761067708 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4001 18.734 204.0 662390.0 25 0 63355.0 + 14775 ILDKKVEKV 9 103 536.3423337667467 1070.6701146002931 2 536.3425170779228 MULTI CID FTMS 0 0 0 3998 355723.34375 0.1735874815625727 -4 0.0691089630126953 3 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 70.32083430771065 0.02097493322155 5 {I|L}{I|L}DKKVEVK 9 2 + 101.75 0.0 0.0 9.5037 9.5037 86.783 0.0 0.0 0.0 29.41196822206416 0.9813624419633272 0.9813624419633272 0.9813624419633272 0 2.159379381312206 2.0 0.7742275032520141 0.2396518287104437 {I|L}{I|L}DKKVEVK;{I|L}{I|L}DKKVEKV;{I|L}{I|L}V[SG]KVEVK;{I|L}{I|L}V[SG]KVEKV;{I|L}{I|L}DKKD{I|L}KV;{I|L}{I|L}DKKDK{I|L}V;VE{I|L}KKVEVK;VE{I|L}KKVEKV;{I|L}{I|L}DKKV[SG]{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KDK{I|L}{I|L}V 9.5037;9.412;8.3422;8.2506;6.5177;6.0002;5.8646;5.773;5.379;4.7574 -;+;-;-;-;-;-;-;-;- + 1780 + 1 3.132 105826.9 1.0 584 3415 3998 SUDHL4_400M_050219_1,4001 SUDHL4_400M_050219_1,4001,ILDKKVEKV True True ILDKKVEKV 18.734017 536.342517077923 57668898.0 3998.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 5.305354754130046 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4002 18.737 167.0 301570.0 25 0 62828.0 + -1 TINGHNAEV 9 80 477.735624863424 953.456696793648 2 477.7356445193291 MULTI CID FTMS 0 0 0 3998 309862.96875 1.0 0 0.0 4 Carbamidomethyl (C) _TIGC(Carbamidomethyl (C))YLDI_ ENST00000495810.1_1_7:26235422-26236427:-|nuORF;ENSG00000122566|ENST00000618183|HNRNPA2B1;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF 16.942295170755138 0.6606234159769251 5 [{I|L}T][{M(Oxidation (M))|F}V]ANG 7 -1 45.647 0.0 0.0 4.7875 0.0 0.0 0.0 248.07915674381096 248.07915674381096 31.0425788214684 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.6861818737241735 [{I|L}T][{M(Oxidation (M))|F}V]ANG 4.7875 - 126 + 1 3.132 44481.4 1.0 585 3415 3998 SUDHL4_400M_050219_1,4002 SUDHL4_400M_050219_1,4002,TIGCYLDI False False TINGHNAEV 18.737276 477.735644519329 1128527.375 3998.0 ENST00000495810.1_1_7:26235422-26236427:-|nuORF;;ENSG00000122566|ENST00000618183|HNRNPA2B1;;nc|ENSG00000122566|P22626|HNRNPA2B1;;ENST00000463181.5_1_7:26232138-26237376:-|nuORF 3.771684169769287 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4003 18.74 152.0 417280.0 25 0 47042.0 + 12033 GQAPPGKAL 9 87 419.74262116032526 0 419.7430297732353 PEAK CID FTMS 0 0 0 3998 245450.09375 1.0 0 0.0 5 Unmodified _GQAPPGKAL_ ENSG00000013573|ENST00000542838|DDX11;ENST00000435753.6_1_12:31250908-31256767:+|nuORF;ENST00000536265.5_1_12:31242773-31256767:+|nuORF;nc|ENSG00000013573|Q96FC9-3|DDX11;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000256263|A8MPP1|DDX11L8 20.453626601364224 0.1969592619112565 5 A 1 8 11.99 0.0 0.0 1.4317 0.0 0.0 581.3528743013162 182.05750452213127 763.4103788234474 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + A 1.4317 + + 14 + 1 3.132 56318.3 1.0 586 3415 3998 SUDHL4_400M_050219_1,4003 SUDHL4_400M_050219_1,4003,GQAPPGKAL False True GQAPPGKAL 18.740305 419.743029773235 8683706.0 3998.0 nc|ENSG00000013573|Q96FC9-3|DDX11;;nc|ENSG00000013573|Q96FC9-4|DDX11;;ENSG00000013573|ENST00000542838|DDX11;;nc|ENSG00000256263|A8MPP1|DDX11L8;;ENST00000435753.6_1_12:31250908-31256767:+|nuORF;;ENST00000536265.5_1_12:31242773-31256767:+|nuORF 4.757319053014119 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4004 18.754 800.0 160730.0 25 0 21772.0 29662 QNSEVMPWDP 10 131 601.7631350943188 1201.5117172554376 2 601.7635375857353 MULTI CID FTMS 0 0 0 3998 130912.640625 0.7285004813102839 -1 0.0408706665039062 6 Unmodified _QNSEVMPWDP_ ENSG00000027001|ENST00000382172|MIPEP;ENST00000494139.1_1_13:24416692-24444322:-|nuORF 17.11289562659939 0.5604042439455784 5 YHDEAQQDP 9 7 62.829 0.0 0.0 5.2291 0.0 0.0 100.06424910713046 0.0 100.06424910713046 0.0 35.62205977262472 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 YHDEAQQDP 5.2291 - 2452 1 3.132 94641.8 0.5899999737739563 587 3415 3998 SUDHL4_400M_050219_1,4004 SUDHL4_400M_050219_1,4004,QNSEVMPWDP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4005 18.767 722.0 153680.0 25 0 12893.0 + 35927 SVPDTVHHV 9 116 495.7543680351749 989.49418313715 2 495.7545349001884 MULTI CID FTMS 0 0 0 3998 87855.703125 0.9894151208938788 -1 0.0408706665039062 7 Unmodified _SVPDTVHHV_ ENSG00000079785|ENST00000233084|DDX1;ENST00000459706.1_1_2:15757448-15761320:+|nuORF;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 44.40701690623563 0.0526327925666318 5 [VS]PDTVH[HV] 9 0 + 59.103 0.0 0.0 5.973 5.973 92.291 0.0 0.0 0.0 9.647642715192504 7.147642715192504 7.147642715192504 16.40559413001163 0 0.4247425010840047 2.0 0.7742275032520141 0.0 + + [VS]PDTVH[HV];[DP]TVHHV[VS];[VS]PEHHV[VS];[PS]EVHHV[VS];[VS]V[MN][KP]{[ES]|[DT]|[{I|L}C]};[VS]P{[QG]|[NA]}[PS][YR];[VS]P{[QG]|[NA]}H[TP][PA];[R{M(Oxidation (M))|F}]H{[SA]|[TG]}H[HV];[VS]P[KT]{[QD]|[EN]|[WG]|[KD]|[RS]}{[ES]|[DT]|[{I|L}C]};[VS]P{[QG]|[NA]}[W{I|L}]G{M(Oxidation (M))|F} 5.973;4.315;4.2932;2.776;2.4615;2.3396;2.0883;1.9254;1.8734;1.7137 +;-;-;-;-;-;-;-;-;- + 329 + 1 3.132 89141.6 1.0 588 3415 3998 SUDHL4_400M_050219_1,4005 SUDHL4_400M_050219_1,4005,SVPDTVHHV True True SVPDTVHHV 18.766646 495.754534900188 405332.375 3998.0 ENST00000459706.1_1_2:15757448-15761320:+|nuORF;;nc|ENSG00000079785|Q92499-2|DDX1;;nc|ENSG00000079785|Q92499-3|DDX1;;ENSG00000079785|ENST00000233084|DDX1 9.732274691263834 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4006 18.78 747.0 97434.0 25 0 15464.0 8561 ETKTPGVMDH 10 77 557.7653627658256 1113.516172598451 2 557.7645141482353 MULTI CID FTMS 0 0 0 3998 84060.078125 0.9955917885738856 -1 0.0408706665039062 8 Unmodified _ETKTPGVMDH_ ENSG00000006788|ENST00000252172|MYH13 17.11289562659939 0.5604042439455784 5 K{M(Oxidation (M))|F}T[{I|L}P]A[DP]K 9 7 18.963 0.0 0.0 1.7029 0.0 0.0 97.96881133042514 0.0 97.96881133042514 0.0 4.3585000496945305 0.0 0.0 0 0.0 0.0 0.0 0.1505149978319906 K{M(Oxidation (M))|F}T[{I|L}P]A[DP]K 1.7029 - 153 + 1 3.132 60259.1 1.0 589 3415 3998 SUDHL4_400M_050219_1,4006 SUDHL4_400M_050219_1,4006,ETKTPGVMDH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4008 18.785 88.0 587750.0 25 0 61021.0 + + 17632 KPTGARPSAL 10 62 499.2934228913112 996.5722928494224 2 499.2932617068291 MULTI CID FTMS 0 0 0 4007 495192.125 0.0602388700166352 18 -0.2307262420654297 1 Unmodified _KPTAAFHLL_ ENST00000473611.5_1_6:33247055-33247262:-|nuORF;ENSG00000227057|ENST00000374617|WDR46 16.942295170755138 0.3780752226737986 5 KPTGN 5 -1 46.938 0.0 0.0 4.71 0.0 0.0 0.0 496.2738436334594 496.2738436334594 36.559596690470535 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTGN 4.71 - 36 + 1 3.114 47638.5 1.0 590 3416 4007 SUDHL4_400M_050219_1,4008 SUDHL4_400M_050219_1,4008,KPTAAFHLL False False KPTGARPSAL 18.785373 499.293261706829 4337376000.0 4007.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 4.8358109792073565 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4009 18.79 242.0 164910.0 25 0 52027.0 + 17259 KLNPYAKTMR 10 52 407.8972923513004 1220.6700476541012 3 407.8969604372978 MULTI CID FTMS 0 0 0 4007 122883.7109375 0.8026434633692306 1 -0.0409984588623046 2 Unmodified _KLNPYAKTMR_ ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF 11.631370582801994 0.6523789101569337 5 {[QV]|[N{I|L}]|[RA]|[KV]}KPYAK[MT]R 10 2 {[QV]|[N{I|L}]|[RA]|[KV]}K + + 23.275 23.148 6.5166 1.9068 1.9068 52.825 0.0 0.0 0.0 0.0 13.058801728398564 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}KPYAK[MT]R 1.9068 - 38 + 1 3.114 41190.8 1.0 591 3416 4007 SUDHL4_400M_050219_1,4009 SUDHL4_400M_050219_1,4009,KLNPYAKTMR False True KLNPYAKTMR 18.789882 407.896960437298 574008.75 4007.0 ENSG00000174444|ENST00000307961|RPL4;;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;;ENST00000567229.5_1_15:66791747-66793486:-|nuORF 4.952548662821452 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4010 18.793 150.0 698510.0 25 0 153000.0 -1 0 64 464.2523527558655 463.2450762892655 1 466.2584106326103 MULTI CID FTMS 0 0 0 4007 210671.625 0.8847383342095642 -1 0.0636577606201171 3 5 P 1 -1 10.0 0.0 0.0 2.1587 0.0 0.0 348.1816282685608 0.0 348.1816282685608 0.0 7.525749891599531 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.1587 - 15 + 1 3.114 86191.5 1.0 592 3416 4007 SUDHL4_400M_050219_1,4010 SUDHL4_400M_050219_1,4010, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4011 18.807 800.0 32094.0 25 0 10495.0 -1 0 30 1024.4188226768863 0 1024.418627917767 PEAK CID FTMS 0 0 0 4007 82253.9375 1.0 0 0.0 4 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.114 31356.3 0.3899999856948852 593 3416 4007 SUDHL4_400M_050219_1,4011 SUDHL4_400M_050219_1,4011, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4012 18.821 800.0 30407.0 25 0 9237.6 -1 0 21 1193.1456054804275 3576.414987041483 3 1193.479785144329 MULTI CID FTMS 0 0 0 4007 78879.8671875 1.0 0 0.0 5 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.114 29100.5 0.3300000131130218 594 3416 4007 SUDHL4_400M_050219_1,4012 SUDHL4_400M_050219_1,4012, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4014 18.825 60.0 812450.0 25 0 57309.0 + 42513 VTLDSPVLY 9 72 503.77461442276086 1005.5346759123216 2 503.7744018435478 MULTI CID FTMS 0 0 0 4013 708128.8125 0.068846220125884 10 -0.0913505554199218 1 Unmodified _VTLDSPVLY_ REV__ENSG00000139112|ENST00000266458|GABARAPL1;REV__ENSG00000170296|ENST00000302386|GABARAP;REV__nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 34.10243960390752 0.1078313939113124 5 VT{I|L}DTTQ[KT] 9 -1 + 79.09 0.0 0.0 7.8655 7.8655 93.928 0.0 0.0 0.0 58.27758175942292 7.504311474114331 7.504311474114331 9.208187539523747 0 0.4247425010840047 2.0 1.1989700043360187 0.0 VT{I|L}DTTQ[KT];VT{I|L}DTT[AG][KT];VT{I|L}[WM]Q[KT];VT{I|L}DT[YV][VP];VT{I|L}[WM][AG][KT] 7.8655;6.9498;6.0035;5.9565;5.0823 -;-;-;-;- 151 + 1 3.114 42165.3 1.0 595 3417 4013 SUDHL4_400M_050219_1,4014 SUDHL4_400M_050219_1,4014,VTLDSPVLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4015 18.829 162.0 368590.0 25 0 80423.0 + + 16539 KAVNPGRSL 9 75 471.2802245794639 940.5458962257278 2 471.2798644900322 MULTI CID FTMS 0 0 0 4013 230361.671875 0.3695726776738716 2 -0.0275001525878906 2 Unmodified _KAVVQHIF_ nc|ENSG00000103429|Q9NZS9-2|BFAR;ENSG00000103429|ENST00000261658|BFAR 23.1484247019978 0.5573009939494978 5 KAVN{[ET]|[MV]}VN 8 -1 48.053 0.0 0.0 5.109 0.0 0.0 0.0 82.0669191949828 82.0669191949828 42.56797838928741 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.6549471895720985 KAVN{[ET]|[MV]}VN 5.109 - 220 + 1 3.114 51641.4 1.0 596 3417 4013 SUDHL4_400M_050219_1,4015 SUDHL4_400M_050219_1,4015,KAVVQHIF False False KAVNPGRSL 18.828506 471.279864490032 2747298.25 4013.0 nc|ENSG00000103429|Q9NZS9-2|BFAR;;ENSG00000103429|ENST00000261658|BFAR 4.432688236236572 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4016 18.837 488.0 173030.0 25 0 21893.0 + 28238 PQQPAAYAL 9 108 479.75136901912623 957.4881851050524 2 479.7524597048759 MULTI CID FTMS 0 0 0 4013 119408.796875 0.2584220038024624 -13 0.2869606018066406 3 Unmodified _PQQPAAYAL_ ENSG00000157303|ENST00000375472|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;nc|ENSG00000157303|Q96L08-3|SUSD3 34.10243960390752 0.1078313939113124 5 PQD 3 7 55.49 0.0 0.0 5.7953 0.0 0.0 0.0 614.3269254627455 614.3269254627455 31.90945934219002 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.3494850021680094 PQD 5.7953 - 170 + 1 3.114 68659.8 1.0 597 3417 4013 SUDHL4_400M_050219_1,4016 SUDHL4_400M_050219_1,4016,PQQPAAYAL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4017 18.844 386.0 118890.0 25 0 10620.0 + 18804 LAQTTRTAY 9 82 512.7752001605863 1023.5358473879728 2 512.7750732302666 MULTI CID FTMS 0 0 0 4013 93374.5234375 0.815976828652184 -2 0.1046562194824218 4 Unmodified _LAQTTRTAY_ ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;ENST00000540844.5_1_21:30439913-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8 38.17557092003332 0.0854718145212029 5 {I|L}AQTT 5 4 67.735 0.0 0.0 6.6178 0.0 0.0 0.0 506.2422274225219 506.2422274225219 49.776296993281406 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.5 0.3494850021680094 + {I|L}AQTT 6.6178 + + 70 + 1 3.114 40140.3 1.0 598 3417 4013 SUDHL4_400M_050219_1,4017 SUDHL4_400M_050219_1,4017,LAQTTRTAY True True LAQTTRTAY 18.844041 512.775073230267 501809.125 4013.0 ENST00000540844.5_1_21:30439913-30445917:-|nuORF;;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 5.443257172902425 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4020 18.858 428.0 285400.0 25 0 117110.0 -1 0 98 470.2571255440435 469.2498490774435 1 470.2574340701103 MULTI CID FTMS 0 0 0 4019 219648.53125 0.700624403977342 -56 0.9028682708740234 1 5 [KA]V 3 -1 5.5633 0.0 0.0 1.1856 0.0 0.0 0.0 168.02658792925914 168.02658792925914 0.9592235319727944 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 [KA]V 1.1856 - 33 1 3.104 98429.0 1.0 599 3419 4019 SUDHL4_400M_050219_1,4020 SUDHL4_400M_050219_1,4020, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4023 18.878 800.0 139400.0 25 0 11852.0 + 30335 RAFPNKQGY 9 117 540.7829401555903 1079.5513273779804 2 540.7833740115166 MULTI CID FTMS 0 0 0 4022 87493.71875 0.1273618795450416 -55 0.8028793334960938 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 46.020951573049366 0.0490941689151868 5 KQGY 4 5 47.467 0.0 0.0 4.3969 0.0 0.0 585.3038527582363 0.0 585.3038527582363 0.0 33.97222222092239 0.0 0.0 0 1.048455006504028 0.0 0.0 0.805462187404089 + KQGY 4.3969 + + 339 1 3.104 88269.3 0.5299999713897705 600 3421 4022 SUDHL4_400M_050219_1,4023 SUDHL4_400M_050219_1,4023,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4024 18.887 505.0 108470.0 25 0 19788.0 -1 LFWKRHFCRYK 11 58 547.6239538118047 1639.8500320356138 3 547.6255370974541 MULTI CID FTMS 0 0 0 4022 81152.96875 0.8644920500217256 -2 0.0139999389648437 2 Carbamidomethyl (C) _LFWKRHFC(Carbamidomethyl (C))RYK_ ENST00000489708.1_1_7:33545204-33545258:+|nuORF 7.477065608646677 0.839870652676021 5 NK 2 -1 23.36 0.0 0.0 1.4245 0.0 0.0 1379.7013780849766 0.0 1379.7013780849766 0.0 5.400990676322905 0.0 0.0 0 0.5 0.0 0.0 0.6421590589602533 NK 1.4245 - 26 + 1 3.104 47682.6 1.0 601 3421 4022 SUDHL4_400M_050219_1,4024 SUDHL4_400M_050219_1,4024,LFWKRHFCRYK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4028 18.901 182.0 348920.0 25 0 54941.0 + 42024 VQRNHETAF 9 90 367.85395261952647 1100.5400284587795 3 368.1879760622978 MULTI CID FTMS 0 0 0 4027 171989.15625 1.0 0 0.0 1 Unmodified _VQRNHETAF_ ENSG00000143384|ENST00000369026|MCL1;nc|ENSG00000143384|Q07820-2|MCL1 10.073929032068715 0.563993802247229 5 ET{[MS]|[{M(Oxidation (M))|F}A]} 4 5 16.682 0.0 0.0 1.5158 0.0 0.0 634.327928611525 0.0 634.327928611525 0.0 1.1978875828839364 0.0 0.0 0 0.0 0.0 0.5 0.0 + ET{[MS]|[{M(Oxidation (M))|F}A]} 1.5158 + + 11 1 3.104 54353.0 1.0 602 3424 4027 SUDHL4_400M_050219_1,4028 SUDHL4_400M_050219_1,4028,VQRNHETAF False True VQRNHETAF 18.901437 368.187976062298 738600.625 4027.0 ENSG00000143384|ENST00000369026|MCL1;;nc|ENSG00000143384|Q07820-2|MCL1 3.470043500264486 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4029 18.904 113.0 533610.0 25 0 173690.0 -1 0 73 427.2208487417562 426.2135722751562 1 427.2203552126884 MULTI CID FTMS 0 0 0 4027 481685.9375 0.8688702845849713 -5 0.0473403930664062 2 5 [DP][VP] 4 -1 + 0.45757 0.0 0.0 0.10736 0.10736 71.075 0.0 0.0 0.0 0.457574905606749 0.457574905606749 0.457574905606749 0.457574905606749 0 0.0 0.0 0.0 0.0 [DP][VP] 0.10736 - 3 + 1 3.104 53963.1 1.0 603 3424 4027 SUDHL4_400M_050219_1,4029 SUDHL4_400M_050219_1,4029, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4035 18.937 773.0 275660.0 25 0 30477.0 + 17016 KKGAKGGS 8 198 366.72177049817776 731.4289880631555 2 366.7219421267509 MULTI CID FTMS 0 0 0 4034 120774.1953125 0.5909789553328377 -4 0.0160541534423828 1 Unmodified _KKGAKGGS_ REV__ENST00000479896.1_1_10:129869671-129881167:+|nuORF 0.0 0.8243325171867699 5 {M(Oxidation (M))|F} 1 -1 15.485 0.0 0.0 2.117 0.0 0.0 566.3497319369822 0.0 566.3497319369822 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.117 - 96 + 1 3.104 168847.3 1.0 604 3429 4034 SUDHL4_400M_050219_1,4035 SUDHL4_400M_050219_1,4035,KKGAKGGS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4036 18.947 588.0 143650.0 25 0 29186.0 + 12556 GVHPDQETY 9 109 523.2322819741852 1044.4500110151705 2 523.2324706912041 MULTI CID FTMS 0 0 0 4034 83382.828125 0.9389504606733082 -1 0.0040531158447265 2 Unmodified _GVHPDQETY_ ENSG00000138095|ENST00000260665|LRPPRC 30.63653989081413 0.1413794767160703 5 {NN|[MP]|[D{I|L}]|[EV]}[Y{I|L}]EETY 8 5 + 40.204 0.0 0.0 3.8493 3.8493 79.048 0.0 0.0 0.0 4.145938159018847 23.213982080541378 4.145938159018847 4.230722815570225 0 0.3807196863200844 1.3010299956639813 0.6109243748081782 0.0 {NN|[MP]|[D{I|L}]|[EV]}[Y{I|L}]EETY;{[TV]|[{I|L}S]}[HM]YMTY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[QT]EETY;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}YGETY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RN]EETY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[NP]{M(Oxidation (M))|F}ETY;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}YWTY;{[DS]|[MA]|[CV]|TT}[NP]YGETY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YMTY;{[DS]|[MA]|[CV]|TT}[NP]YWTY 3.8493;3.4442;3.0937;3.0443;2.9251;2.5093;2.4241;1.9077;1.7417;1.2875 -;-;-;-;-;-;-;-;-;- 267 1 3.104 70903.6 1.0 605 3429 4034 SUDHL4_400M_050219_1,4036 SUDHL4_400M_050219_1,4036,GVHPDQETY False True GVHPDQETY 18.947404 523.232470691204 461949.5625 4034.0 ENSG00000138095|ENST00000260665|LRPPRC 6.229742527008057 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4038 18.952 34.0 1567600.0 25 0 301570.0 + 14774 ILDKKVEKV 9 86 357.89727894477073 1070.6700074345122 3 357.8971740603447 MULTI CID FTMS 0 0 0 4037 1248428.375 0.2298579024746354 13 -0.1689434051513672 1 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 34.221707139014875 0.1071766711162635 5 {I|L}{I|L}DKVKEKV 9 2 + 80.103 0.0 0.0 7.4816 7.4816 90.382 0.0 0.0 0.0 59.22486043411472 21.118738776874764 21.118738776874764 6.332946754800389 0 0.4916440611282626 2.0 1.1549471895720984 0.5 {I|L}{I|L}DKVKEKV;{I|L}{I|L}DVKKEKV;{I|L}VEKVKEKV;{I|L}VEVKKEKV 7.4816;6.8901;5.0883;4.4968 -;-;-;- 195 + 1 3.104 48188.3 1.0 606 3430 4037 SUDHL4_400M_050219_1,4038 SUDHL4_400M_050219_1,4038,ILDKKVEKV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4039 18.966 800.0 89489.0 25 0 9703.3 + 17057 KLAEQAERY 9 86 554.294016608284 1106.573480283368 2 554.2942382693291 MULTI CID FTMS 0 0 0 4037 95763.78125 1.0 0 0.0 2 Unmodified _KLAEQAERY_ ENSG00000108953|ENST00000264335|YWHAE;ENSG00000134308|ENST00000238081|YWHAQ;ENSG00000164924|ENST00000395958|YWHAZ;ENSG00000166913|ENST00000353703|YWHAB;ENSG00000175793|ENST00000339276|SFN;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENST00000486241.1_1_17:1265194-1303470:-|nuORF;ENST00000489287.1_1_17:1268113-1303470:-|nuORF;ENST00000498643.1_1_17:1302531-1303404:-|nuORF;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;ENST00000576854.1_1_17:1303083-1303470:-|nuORF;nc|ENSG00000166913|P31946-2|YWHAB;nc|ENSG00000175793|P31947-2|SFN 26.020703789607367 0.2001090068861241 5 K{I|L}AEQAERY 9 0 + 67.829 0.0 0.0 6.1296 6.1296 90.312 0.0 0.0 0.0 41.63093786472516 11.962724883926654 11.962724883926654 9.208187539523747 0 1.3494850021680094 0.0 0.0 0.0 + + K{I|L}AEQAERY;K{I|L}AE[AG]AERY 6.1296;5.2975 +;- + 103 + 1 3.104 57060.9 0.5 607 3430 4037 SUDHL4_400M_050219_1,4039 SUDHL4_400M_050219_1,4039,KLAEQAERY False True KLAEQAERY 18.96636 554.294238269329 385784.375 4037.0 ENSG00000108953|ENST00000264335|YWHAE;;ENSG00000166913|ENST00000353703|YWHAB;;ENST00000498643.1_1_17:1302531-1303404:-|nuORF;;nc|ENSG00000166913|P31946-2|YWHAB;;ENST00000517727.5_1_8:101936341-101962760:-|nuORF;;ENSG00000175793|ENST00000339276|SFN;;nc|ENSG00000175793|P31947-2|SFN;;ENST00000486241.1_1_17:1265194-1303470:-|nuORF;;ENSG00000134308|ENST00000238081|YWHAQ;;ENST00000576854.1_1_17:1303083-1303470:-|nuORF;;ENSG00000164924|ENST00000395958|YWHAZ;;ENST00000489287.1_1_17:1268113-1303470:-|nuORF;;ENST00000480304.5_1_8:101936173-101961117:-|nuORF 6.527089277903239 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4040 18.98 800.0 44460.0 25 0 13494.0 -1 0 32 1102.105276208826 3303.2939992266784 3 1102.440844714642 MULTI CID FTMS 0 0 0 4037 79920.3984375 0.5275964879888352 -10 0.0892066955566406 3 5 E 1 -1 5.4846 0.0 0.0 0.16603 0.0 0.0 2647.0663513768723 524.1596773736936 3171.226028750566 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16603 - 4 + 1 3.104 45838.4 0.3400000035762787 608 3430 4037 SUDHL4_400M_050219_1,4040 SUDHL4_400M_050219_1,4040, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4042 18.99 392.0 291830.0 25 0 22771.0 + 14776 ILDKKVEKV 9 104 536.3423337667467 1070.6701146002931 2 536.3425781130791 MULTI CID FTMS 0 0 0 4041 280724.03125 0.1369889788088456 12 -0.1361255645751953 1 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 55.46699784157472 0.0285918206075701 5 {I|L}{I|L}DKKVEKV 9 0 + 90.843 0.0 0.0 8.4846 8.4846 88.393 0.0 0.0 0.0 36.47817481888637 2.8207499751527365 2.8207499751527365 2.8207499751527365 0 2.0356668758921828 2.0 0.5994850021680094 0.6109243748081782 + + {I|L}{I|L}DKKVEKV;{I|L}{I|L}DKKVEVK;{I|L}{I|L}V[SG]KVEKV;{I|L}{I|L}V[SG]KVEVK;V{[QN]|[E{I|L}]|[KN]}KKVEKV;V{[QN]|[E{I|L}]|[KN]}KKVEVK;V{I|L}{I|L}[SG]KVEKV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KV{I|L}EKV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KDK{I|L}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KD{I|L}{I|L}KV 8.4846;8.2212;6.9718;6.7083;4.3745;4.111;2.8616;2.8018;2.7414;2.6514 +;-;-;-;-;-;-;-;-;- + 601 + 1 3.104 92240.2 1.0 609 3431 4041 SUDHL4_400M_050219_1,4042 SUDHL4_400M_050219_1,4042,ILDKKVEKV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4045 19.01 800.0 36721.0 25 0 9081.4 -1 0 23 1151.1193029055394 3450.3360793168185 3 1151.452929675579 MULTI CID FTMS 0 0 0 4044 36370.4375 0.4871043454823356 1 -0.0164012908935546 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.104 35764.5 0.3300000131130218 610 3433 4044 SUDHL4_400M_050219_1,4045 SUDHL4_400M_050219_1,4045, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4048 19.024 412.0 213490.0 25 0 23027.0 17700 KPTGVRTNVP 10 74 534.8117478442462 1067.6089427552922 2 534.8119384646416 MULTI CID FTMS 0 0 0 4047 211936.15625 0.263123452704404 -15 0.156137466430664 1 Unmodified _KPTGVRTNVP_ ENSG00000165458|ENST00000298229|INPPL1;nc|ENSG00000165458|O15357-2|INPPL1 14.40537977576856 0.6058337302021266 5 KPTGAAR 7 6 62.199 0.0 0.0 5.826 0.0 0.0 0.0 383.1945894830688 383.1945894830688 40.40298891612736 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 KPTGAAR 5.826 - 68 + 1 3.104 72286.3 1.0 611 3435 4047 SUDHL4_400M_050219_1,4048 SUDHL4_400M_050219_1,4048,KPTGVRTNVP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4049 19.03 334.0 244990.0 25 0 76366.0 + 40092 VGIGKIRSW 9 79 508.30446826342927 1014.5943835936586 2 508.3031799197197 MULTI CID FTMS 0 0 0 4047 124097.53125 0.413664814832562 -7 0.0985221862792968 2 Unmodified _VGIGKIRSW_ REV__ENSG00000136160|ENST00000646607|EDNRB;REV__nc|ENSG00000136160|P24530-2|EDNRB;REV__nc|ENSG00000136160|P24530-3|EDNRB 10.823927491677226 0.5436922275383211 5 VG 2 -1 33.06 0.0 0.0 3.2584 0.0 0.0 0.0 855.4694307916624 855.4694307916624 21.80064645515668 0.0 0.0 0.0 0 0.4476212463643422 1.0 0.0 0.0 VG 3.2584 + + 24 + 1 3.104 67530.6 1.0 612 3435 4047 SUDHL4_400M_050219_1,4049 SUDHL4_400M_050219_1,4049,VGIGKIRSW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4052 19.041 222.0 307360.0 25 0 36357.0 + 17633 KPTAAFHLL 9 68 499.2934228913112 996.5722928494224 2 499.2933837771416 MULTI CID FTMS 0 0 0 4051 238830.25 0.0290530960802143 39 -0.6508846282958984 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 5 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3538302057249 667.3538302057249 26.13621890751532 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 27 + 1 3.104 58410.0 1.0 613 3437 4051 SUDHL4_400M_050219_1,4052 SUDHL4_400M_050219_1,4052,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4053 19.055 800.0 127520.0 25 0 5912.3 + 16721 KEVRNESY 8 124 512.7566272606531 1023.4987015881062 2 512.7565185427666 MULTI CID FTMS 0 0 0 4051 119678.4140625 0.3726670173700342 -8 0.1144847869873046 2 Unmodified _KEVRNESY_ REV__ENSG00000116288|ENST00000338639|PARK7;REV__ENST00000547655.1_1_12:49989013-49989364:+|nuORF 26.88365393820708 0.4786498634179528 5 VY[KP]SY 6 -1 30.283 0.0 0.0 2.9588 0.0 0.0 268.10404866398216 0.0 268.10404866398216 0.0 7.756864713971758 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.3494850021680094 VY[KP]SY 2.9588 - 786 + 1 3.104 84562.7 0.8600000143051147 614 3437 4051 SUDHL4_400M_050219_1,4053 SUDHL4_400M_050219_1,4053,KEVRNESY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4054 19.059 246.0 337880.0 25 0 114640.0 + -1 AAFAGRATA 9 85 418.22576030165663 417.2184838350567 1 418.2251159548759 MULTI CID FTMS 0 0 0 4051 228492.078125 0.8261330233268644 -9 0.1185379028320312 3 ENSG00000213614|ENST00000268097|HEXA;ENST00000563908.1_1_15:72647792-72668286:-|nuORF 5 M 1 -1 11.259 0.0 0.0 2.6986 0.0 0.0 268.1678684559535 0.0 268.1678684559535 0.0 0.3684346775210265 0.0 0.0 0 0.0 0.0 0.0 0.0 M 2.6986 - 14 + 1 3.104 71152.1 1.0 615 3437 4051 SUDHL4_400M_050219_1,4054 SUDHL4_400M_050219_1,4054, False False AAFAGRATA 19.059478 418.225115954876 5261996.5 4051.0 ENSG00000213614|ENST00000268097|HEXA;;ENST00000563908.1_1_15:72647792-72668286:-|nuORF 0.9345140506823858 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4057 19.076 562.0 212190.0 25 0 19732.0 + 16475 KAISGVHTV 9 137 456.2684778204805 910.522402707761 2 456.2671386599541 MULTI CID FTMS 0 0 0 4056 151645.984375 0.5256818320921615 -9 0.11614990234375 1 Unmodified _KAISGVHTV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 89.40071534611396 0.0152361884002446 5 KA{I|L}S[VG]HTV 9 0 + 63.914 0.0 0.0 7.0195 7.0195 94.879 0.0 0.0 0.0 34.594655130819 13.35630480878477 13.35630480878477 16.343567942833488 0 2.0994850021680094 0.0 2.1791746928241125 0.0 + + KA{I|L}S[VG]HTV;RRSRHTV;[KA]{I|L}S[VG]HTV;{[TV]|[{I|L}S]}V[KQ]HTV;{[TV]|[{I|L}S]}H{[QV]|[N{I|L}]|[RA]|[KV]}KTV;{[TV]|[{I|L}S]}H[VG]AKTV;{[TV]|[{I|L}S]}[KA][VG]HTV;{[QD]|[EN]|[WG]|[KD]|[RS]}RRHTV;[HT]V{[QV]|[N{I|L}]|[RA]|[KV]}KTV;[HT]V[VG]AKTV 7.0195;5.2245;3.9798;3.8089;3.3057;3.2495;3.1252;2.9279;2.5718;2.5156 +;-;+;-;-;-;-;-;-;- + 722 + 1 3.104 96753.3 1.0 616 3439 4056 SUDHL4_400M_050219_1,4057 SUDHL4_400M_050219_1,4057,KAISGVHTV True True KAISGVHTV 19.075938 456.267138659954 1051821.25 4056.0 ENSG00000180574|ENST00000538173|EIF2S3B;;ENSG00000130741|ENST00000253039|EIF2S3;;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 4.647014776865642 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4059 19.086 412.0 261600.0 25 0 33508.0 + 42514 VTLDSPVLY 9 110 503.77461442276086 1005.5346759123216 2 503.7745239138603 MULTI CID FTMS 0 0 0 4058 157801.84375 0.0153419268914197 33 -0.5333003997802734 1 Unmodified _VTLDSPVLY_ REV__ENSG00000139112|ENST00000266458|GABARAPL1;REV__ENSG00000170296|ENST00000302386|GABARAP;REV__nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 42.09456458481378 0.0639583784996157 5 VT{I|L}DTTQTK 9 -1 + 87.004 0.0 0.0 8.6525 8.6525 94.826 0.0 0.0 0.0 36.47817481888637 9.330732935673296 9.330732935673296 9.208187539523747 0 0.4247425010840047 2.0 1.4204841662593095 0.3054621874040891 VT{I|L}DTTQTK;VT{I|L}DTT[AG]TK;VT{I|L}DTT[KT]Q;VT{I|L}[WM]QTK;VT{I|L}[WM][AG]TK;VT{I|L}[WM][KT]Q;VT{I|L}DT[YV][VP];VT{I|L}YVTD[VP] 8.6525;7.7368;7.7246;7.2168;6.2957;6.2888;5.612;5.3692 -;-;-;-;-;-;-;- 542 + 1 3.104 86536.0 1.0 617 3440 4058 SUDHL4_400M_050219_1,4059 SUDHL4_400M_050219_1,4059,VTLDSPVLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4060 19.1 800.0 152950.0 25 0 25362.0 28242 PQQPDEAAAEK 11 108 592.2834973925123 1182.5524418518246 2 592.2832519412041 MULTI CID FTMS 0 0 0 4058 110135.515625 0.7117160007318424 -8 0.0861377716064453 2 Unmodified _PQQPDEAAAEK_ ENST00000477392.1_1_7:150130835-150139740:+|nuORF 21.799462835604743 0.5803446114589816 5 QHVDAAEK 8 5 74.234 0.0 0.0 6.2775 0.0 0.0 286.1129568267772 0.0 286.1129568267772 0.0 68.1250948964163 0.0 0.0 0 2.717900182820548 0.0 0.8252574989159953 0.7134679910804405 QHVDAAEK 6.2775 - 414 + 1 3.104 97416.2 0.5099999904632568 618 3440 4058 SUDHL4_400M_050219_1,4060 SUDHL4_400M_050219_1,4060,PQQPDEAAAEK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4062 19.112 497.0 133130.0 25 0 20545.0 28239 PQQPAAYAL 9 90 479.75136901912623 957.4881851050524 2 479.7514831423759 MULTI CID FTMS 0 0 0 4061 148758.015625 0.3219389650138832 11 -0.0991668701171875 1 Unmodified _PQQPAAYAL_ ENSG00000157303|ENST00000375472|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;nc|ENSG00000157303|Q96L08-3|SUSD3 28.486842064014134 0.1687311288560894 5 PQDT[WK]A{I|L} 8 5 + 63.045 0.0 0.0 6.5845 6.5845 94.588 0.0 0.0 0.0 45.48245664532708 6.898962788844827 6.898962788844827 24.490925311194182 0 1.3494850021680094 1.5228787452803376 0.0 0.4247425010840047 PQDT[WK]A{I|L};P[AG]DT[WK]A{I|L} 6.5845;4.0266 -;- 101 + 1 3.104 55699.5 1.0 619 3441 4061 SUDHL4_400M_050219_1,4062 SUDHL4_400M_050219_1,4062,PQQPAAYAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4065 19.124 251.0 245550.0 25 0 14302.0 + 30336 RAFPNKQGY 9 82 540.7829401555903 1079.5513273779804 2 540.7834350466728 MULTI CID FTMS 0 0 0 4064 214545.375 0.312307015841589 -33 0.4836845397949219 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 52.268347100219714 0.0353964759249114 5 KQGY 4 5 52.977 0.0 0.0 4.9074 0.0 0.0 585.3025169878098 0.0 585.3025169878098 0.0 39.4825221775622 0.0 0.0 0 1.4802046884880935 0.0 0.0 0.9247425010840048 + KQGY 4.9074 + + 99 1 3.104 53391.8 1.0 620 3443 4064 SUDHL4_400M_050219_1,4065 SUDHL4_400M_050219_1,4065,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4066 19.13 381.0 178270.0 25 0 11223.0 + 30343 RAFPNKQGY 9 107 360.8578392336925 1079.5516883012776 3 360.8578063845634 MULTI CID FTMS 0 0 0 4064 84837.0546875 0.2723244965837381 -32 0.4695720672607422 2 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 25.399314129420983 0.2080152500878129 5 PN 2 7 18.271 0.0 0.0 1.6925 0.0 0.0 374.2091302781205 491.2245577447876 865.4336880229081 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + PN 1.6925 + + 60 + 1 3.104 61402.6 1.0 621 3443 4064 SUDHL4_400M_050219_1,4066 SUDHL4_400M_050219_1,4066,RAFPNKQGY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4071 19.151 317.0 192120.0 25 0 20384.0 + 41125 VNVQERQPMKF 11 74 459.2445892176365 1374.7119382531096 3 459.2437621951103 MULTI CID FTMS 0 0 0 4070 94511.7265625 0.9048027877870968 9 -0.0896549224853515 1 Unmodified _VNVQERQPMKF_ REV__ENSG00000183559|ENST00000329446|C10orf120 2.434785330301024 0.8636604596255422 5 Y 1 -1 13.099 0.0 0.0 0.95285 0.0 0.0 1193.6376564921704 0.0 1193.6376564921704 0.0 3.634993639681312 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.95285 - 56 + 1 3.104 55943.0 1.0 622 3447 4070 SUDHL4_400M_050219_1,4071 SUDHL4_400M_050219_1,4071,VNVQERQPMKF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4072 19.153 93.0 889050.0 25 0 76093.0 12492 GVAVYRKYI 9 120 356.877178056587 1067.6097047699611 3 357.2115966677666 MULTI CID FTMS 0 0 0 4070 442478.59375 1.0 0 0.0 2 Unmodified _GVAVYRKYI_ ENSG00000070159|ENST00000374541|PTPN3;nc|ENSG00000070159|P26045-2|PTPN3;nc|ENSG00000070159|P26045-3|PTPN3 12.531546534597751 0.4974689918368763 5 HTPR{I|L} 5 7 28.672 0.0 0.0 2.6856 0.0 0.0 445.2530995099625 0.0 445.2530995099625 0.0 15.177287669604311 0.0 0.0 0 0.0 0.0 0.0 0.0 HTPR{I|L} 2.6856 - 137 1 3.104 71488.4 1.0 623 3447 4070 SUDHL4_400M_050219_1,4072 SUDHL4_400M_050219_1,4072,GVAVYRKYI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4075 19.166 343.0 189590.0 25 0 25952.0 + 42497 VTKPVGGNY 9 105 467.753705570814 933.492858208428 2 467.7537719607353 MULTI CID FTMS 0 0 0 4074 120016.4375 0.0722010273551024 -14 0.1424884796142578 1 Unmodified _VTKPVGGNY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 26.88365393820708 0.1891292719743517 5 NY 2 7 22.708 0.0 0.0 2.4326 0.0 0.0 638.3755924386999 0.0 638.3755924386999 0.0 12.001770773727976 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.2887254899964357 + NY 2.4326 + + 88 + 1 3.104 56521.4 1.0 624 3449 4074 SUDHL4_400M_050219_1,4075 SUDHL4_400M_050219_1,4075,VTKPVGGNY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4076 19.179 800.0 101310.0 25 0 28921.0 + 32225 RVYPERSTSY 10 71 629.3151531481457 1256.6157533630912 2 629.3143188357353 MULTI CID FTMS 0 0 0 4074 106198.265625 0.7876228507990733 -6 0.040475845336914 2 Unmodified _RVYPERSTSY_ ENSG00000111786|ENST00000229390|SRSF9;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;ENST00000603963.1_1_12:120899824-120902572:-|nuORF 9.5439744041441 0.6824900257974675 5 [VG]VY{NN|[MP]|[D{I|L}]|[EV]}[WR]SY 10 5 + 32.152 0.0 0.0 2.5586 2.5586 83.914 0.0 0.0 0.0 17.203774648612793 3.4678748622465605 3.4678748622465605 18.750612633917 0 0.4247425010840047 1.3010299956639813 0.0 0.0 [VG]VY{NN|[MP]|[D{I|L}]|[EV]}[WR]SY;[VG]VY[YE][R{M(Oxidation (M))|F}][QP] 2.5586;1.0665 -;- 70 + 1 3.104 63573.8 0.5099999904632568 625 3449 4074 SUDHL4_400M_050219_1,4076 SUDHL4_400M_050219_1,4076,RVYPERSTSY False True RVYPERSTSY 19.179402 629.314318835735 891307.75 4074.0 ENST00000603963.1_1_12:120899824-120902572:-|nuORF;;ENST00000548326.1_1_12:120899824-120899986:-|nuORF;;ENST00000548792.1_1_12:120899824-120901956:-|nuORF;;ENSG00000111786|ENST00000229390|SRSF9 7.5454912185668945 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4079 19.199 738.0 185620.0 25 0 40417.0 + 32765 SEDPSHPSM 9 124 493.6981555027106 985.3817580722211 2 493.6978637576103 MULTI CID FTMS 0 0 0 4078 88868.25 0.2348202448261306 -12 0.1199150085449218 1 Unmodified _SEDPSHPSM_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 61.357469665136826 0.0253304979873734 5 {[ES]|[DT]|[{I|L}C]}DPSHPSM 9 0 + 44.835 0.0 0.0 4.55 4.55 80.896 0.0 0.0 0.0 7.147642715192504 4.023048140744862 4.023048140744862 4.023048140744862 0 0.7742275032520141 0.0 0.6694451763165201 0.0 + + {[ES]|[DT]|[{I|L}C]}DPSHPSM;{[ES]|[DT]|[{I|L}C]}DPSH[WE];{[ES]|[DT]|[{I|L}C]}D[W{M(Oxidation (M))|F}][TA]M;{[ES]|[DT]|[{I|L}C]}D[W{M(Oxidation (M))|F}][R{M(Oxidation (M))|F}];{[ES]|[DT]|[{I|L}C]}DP{[ET]|[MV]}[DP]P;{[ES]|[DT]|[{I|L}C]}[W{M(Oxidation (M))|F}]D[R{M(Oxidation (M))|F}];{[ES]|[DT]|[{I|L}C]}D[W{M(Oxidation (M))|F}][CS]{I|L};{[ES]|[DT]|[{I|L}C]}[W{M(Oxidation (M))|F}]D[TA]M;{[ES]|[DT]|[{I|L}C]}D[HV]D{[MG]|[TS]}P;{[ES]|[DT]|[{I|L}C]}[W{M(Oxidation (M))|F}]D[CS]{I|L} 4.55;4.1417;2.1356;1.8255;1.7617;1.52;1.451;1.4437;1.2185;0.75909 +;-;-;-;-;-;-;-;-;- + 287 + 1 3.104 110845.9 1.0 626 3451 4078 SUDHL4_400M_050219_1,4079 SUDHL4_400M_050219_1,4079,SEDPSHPSM True True SEDPSHPSM 19.198796 493.69786375761 2121130.0 4078.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 7.996459643046061 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4084 19.218 253.0 257850.0 25 0 18122.0 -1 ESATITCLV 9 94 497.2498129556803 992.4850729781606 2 497.2494384646416 MULTI CID FTMS 0 0 0 4083 265792.21875 0.2056609236480812 -18 0.1766471862792968 1 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 48.345845343767074 0.0439967357579942 5 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 44.129 0.0 0.0 4.4463 4.4463 88.78 0.0 0.0 0.0 25.597044660231383 10.171529360142948 10.171529360142948 29.53016278251048 0 1.1861818737241734 0.0 0.3807196863200844 0.0 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}A{I|L}{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}K;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG][{I|L}P]T{M(Oxidation (M))|F}K 4.4463;1.4709;1.2288 -;-;- 166 + 1 3.104 54399.5 1.0 627 3455 4083 SUDHL4_400M_050219_1,4084 SUDHL4_400M_050219_1,4084,ESATITCLV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 4085 19.232 800.0 57586.0 25 0 9376.7 -1 0 40 932.63400963213 3726.50693266212 4 932.8853637576104 MULTI CID FTMS 0 0 0 4083 67674.4296875 0.1372218518896361 -13 0.0987071990966796 2 5 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.25396 0.0 0.0 2000.7006104959075 1518.7069136760472 3519.4075241719547 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.25396 - 7 + 1 3.104 48057.3 0.3600000143051147 628 3455 4083 SUDHL4_400M_050219_1,4085 SUDHL4_400M_050219_1,4085, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4088 19.242 161.0 363470.0 25 0 32448.0 + 45191 YQTAPKAGY 9 81 499.7503545298003 997.4861561264006 2 499.7508117556572 MULTI CID FTMS 0 0 0 4087 167648.5 0.8777466539168003 -3 0.0290374755859375 1 Unmodified _YQTAPKAGY_ ENSG00000056097|ENST00000265069|ZFR;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 19.256988751693697 0.3154191944385105 5 [KP][DP]PAT{[WS]|[C(Carbamidomethyl (C)){I|L}]} 9 8 + 24.855 0.0 0.0 2.4918 2.4918 74.322 0.0 0.0 0.0 3.65742484373364 7.420299789533406 3.65742484373364 2.218487496163565 0 0.5 0.0 0.0 0.2742275032520141 [KP][DP]PAT{[WS]|[C(Carbamidomethyl (C)){I|L}]};[KP]QH{[ES]|[DT]|[{I|L}C]}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[KP]AGH{[ES]|[DT]|[{I|L}C]}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[H{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}AT{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]TAP[KA][YG] 2.4918;2.2694;2.2181;1.4703;1.3115 -;-;-;-;+ + 119 1 3.104 52505.3 1.0 629 3457 4087 SUDHL4_400M_050219_1,4088 SUDHL4_400M_050219_1,4088,YQTAPKAGY False True YQTAPKAGY 19.241683 499.750811755657 1156831.0 4087.0 ENSG00000056097|ENST00000265069|ZFR;;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 1.473997175693512 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4089 19.256 800.0 44994.0 25 0 14153.0 -1 0 33 1094.110811825307 3279.310606076121 3 1094.108813464642 MULTI CID FTMS 0 0 0 4087 59139.83984375 0.2709126592474025 -5 0.0371570587158203 2 5 G 1 -1 6.9897 0.0 0.0 0.21315 0.0 0.0 1856.6645869316087 1362.6064520691325 3219.271039000741 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21315 - 2 + 1 3.104 42847.5 0.3700000047683716 630 3457 4087 SUDHL4_400M_050219_1,4089 SUDHL4_400M_050219_1,4089, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4090 19.261 193.0 55492.0 25 0 16105.0 -1 0 16 1198.8035729439691 3593.388889432108 3 1199.806689441204 MULTI CID FTMS 0 0 0 4087 70264.8515625 0.2464223432836377 -11 0.0976104736328125 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.104 19101.9 1.0 631 3457 4087 SUDHL4_400M_050219_1,4090 SUDHL4_400M_050219_1,4090, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4094 19.274 68.0 540440.0 25 0 56750.0 17701 KPTGVRTNVP 10 44 534.8117478442462 1067.6089427552922 2 534.8118163943291 MULTI CID FTMS 0 0 0 4093 474560.0 0.5891767970355553 10 -0.2031097412109375 1 Unmodified _KPTGVRTNVP_ ENSG00000165458|ENST00000298229|INPPL1;nc|ENSG00000165458|O15357-2|INPPL1 7.608950283845883 0.6914406445242895 5 KPT 3 7 39.253 0.0 0.0 3.6767 0.0 0.0 0.0 738.3908250757634 738.3908250757634 21.97235328539264 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 + KPT 3.6767 + + 9 + 1 3.104 36994.3 1.0 632 3460 4093 SUDHL4_400M_050219_1,4094 SUDHL4_400M_050219_1,4094,KPTGVRTNVP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4095 19.287 792.0 151640.0 25 0 27969.0 + 18116 KTLEQTKAI 9 116 516.3094092517592 1030.6042655703184 2 516.3097411990166 MULTI CID FTMS 0 0 0 4093 86575.84375 0.7601510135133744 1 -0.0357913970947265 2 Unmodified _KTLEQTKAI_ ENSG00000120262|ENST00000239374|CCDC170 34.93206674587334 0.1032771302489716 5 KT{I|L}ETQ{I|L}AK 9 4 + 72.006 0.0 0.0 6.9868 6.9868 93.127 0.0 0.0 0.0 52.38455093053391 17.188166459799376 17.188166459799376 9.208187539523756 0 1.0629529932484498 0.0 0.4247425010840047 0.2215141619232908 KT{I|L}ETQ{I|L}AK;KT{I|L}ET[AG]{I|L}AK;KT{I|L}E[WR]AK;K[KS][TA]GQ{I|L}AK;KT{I|L}ETQK[{I|L}A];KT{I|L}ET[AG]K[{I|L}A];[{I|L}T]EQ[KT]{I|L}AK;{[ET]|[MV]}{I|L}Q[KT]{I|L}AK;[KT][KT]G{[QG]|[NA]}RR;K[KS][TA]GQK[{I|L}A] 6.9868;6.0933;5.2388;4.0668;3.822;2.9285;2.6767;1.1134;1.0996;0.90197 -;-;-;-;-;-;-;-;-;- 448 + 1 3.104 95051.6 1.0 633 3460 4093 SUDHL4_400M_050219_1,4095 SUDHL4_400M_050219_1,4095,KTLEQTKAI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4096 19.289 48.0 883220.0 25 0 67580.0 + 12133 GQKPGGSDF 9 85 446.7117943752351 891.4090358172701 2 446.7115966677666 MULTI CID FTMS 0 0 0 4093 620336.375 0.0811684396933444 -11 0.1121902465820312 3 Unmodified _GQKPGGSDF_ ENSG00000128989|ENST00000249822|ARPP19;ENSG00000143420|ENST00000369014|ENSA;nc|ENSG00000128989|P56211-2|ARPP19;nc|ENSG00000143420|O43768-2|ENSA;nc|ENSG00000143420|O43768-3|ENSA;nc|ENSG00000143420|O43768-4|ENSA;nc|ENSG00000143420|O43768-5|ENSA;nc|ENSG00000143420|O43768-6|ENSA;nc|ENSG00000143420|O43768-7|ENSA;nc|ENSG00000143420|O43768-8|ENSA;nc|ENSG00000143420|O43768-9|ENSA 20.453626601364224 0.2830276176381075 5 D{M(Oxidation (M))|F} 2 7 17.959 0.0 0.0 2.0147 0.0 0.0 611.3032446569171 0.0 611.3032446569171 0.0 3.7371250542002334 0.0 0.0 0 0.0 0.0 0.0 0.0 + D{M(Oxidation (M))|F} 2.0147 + + 26 + 1 3.104 38155.0 1.0 634 3460 4093 SUDHL4_400M_050219_1,4096 SUDHL4_400M_050219_1,4096,GQKPGGSDF False True GQKPGGSDF 19.28877 446.711596667767 149234544.0 4093.0 nc|ENSG00000143420|O43768-7|ENSA;;nc|ENSG00000143420|O43768-4|ENSA;;ENSG00000143420|ENST00000369014|ENSA;;nc|ENSG00000128989|P56211-2|ARPP19;;nc|ENSG00000143420|O43768-3|ENSA;;nc|ENSG00000143420|O43768-9|ENSA;;ENSG00000128989|ENST00000249822|ARPP19;;nc|ENSG00000143420|O43768-5|ENSA;;nc|ENSG00000143420|O43768-2|ENSA;;nc|ENSG00000143420|O43768-6|ENSA;;nc|ENSG00000143420|O43768-8|ENSA 5.300997098286946 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4097 19.291 104.0 373280.0 25 0 34236.0 + 15897 ISSNTLHAY 9 68 503.2539559246125 1004.493358916025 2 503.2532531619072 MULTI CID FTMS 0 0 0 4093 145772.609375 0.3797020419901278 -7 0.0661334991455078 4 Unmodified _ISSNTLHAY_ REV__ENSG00000120440|ENST00000239587|TTLL2 11.640296217721598 0.521594087909532 5 Y 1 -1 15.485 0.0 0.0 1.5415 0.0 0.0 823.4191229314532 0.0 823.4191229314532 0.0 4.515449934959719 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5415 + + 23 + 1 3.104 34225.5 1.0 635 3460 4093 SUDHL4_400M_050219_1,4097 SUDHL4_400M_050219_1,4097,ISSNTLHAY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4098 19.305 800.0 155160.0 25 0 63618.0 -1 0 115 508.2942671632178 507.2869906966178 1 508.2914001345634 MULTI CID FTMS 0 0 0 4093 106150.953125 0.6163764348093144 9 -0.1991100311279297 5 5 {I|L} 1 -1 13.495 0.0 0.0 2.6602 0.0 0.0 376.19201801771 0.0 376.19201801771 0.0 0.150020216108988 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.6602 - 33 + 1 3.104 100703.5 0.9900000095367432 636 3460 4093 SUDHL4_400M_050219_1,4098 SUDHL4_400M_050219_1,4098, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4100 19.31 80.0 452280.0 25 0 38309.0 + 17634 KPTAAFHLL 9 66 499.29336522974654 996.5721775262932 2 499.2930786013603 MULTI CID FTMS 0 0 0 4099 257789.4375 0.2067082191533676 -4 0.0688304901123046 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 14.838274106304384 0.4350285940865338 5 KPT 3 -1 34.45 0.0 0.0 3.4569 0.0 0.0 0.0 667.3540743463499 667.3540743463499 20.471062485323515 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 KPT 3.4569 + + 19 + 1 3.104 31610.0 1.0 637 3461 4099 SUDHL4_400M_050219_1,4100 SUDHL4_400M_050219_1,4100,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4101 19.323 782.0 113840.0 25 0 9831.9 + 33418 SHGTLSIFY 9 112 512.7566272606531 1023.4987015881062 2 512.7562744021416 MULTI CID FTMS 0 0 0 4099 68469.0234375 0.2132059231113032 16 -0.3923568725585937 2 Unmodified _SHGTLSIFY_ REV__ENST00000517342.1_1_8:57389817-57390279:-|nuORF 12.531546534597751 0.4974689918368763 5 [KP]T{[DS]|[MA]|[CV]|TT}QVSY 9 -1 [KP]T{[DS]|[MA]|[CV]|TT}QV + + 24.464 5.718 0.75695 2.3902 2.3902 53.256 0.0 0.0 0.0 0.0 13.38377498282561 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 [KP]T{[DS]|[MA]|[CV]|TT}QVSY 2.3902 - 290 + 1 3.104 72424.1 1.0 638 3461 4099 SUDHL4_400M_050219_1,4101 SUDHL4_400M_050219_1,4101,SHGTLSIFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4102 19.328 268.0 361620.0 25 0 55119.0 + 39297 VADPETRTV 9 105 494.25920832570415 986.5038637182084 2 494.2587158083916 MULTI CID FTMS 0 0 0 4099 99045.7890625 0.2529791727095256 -8 0.1019248962402343 3 Unmodified _VADPETRTV_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 19.361941925380144 0.3125782356748823 5 VADPE 5 4 56.855 0.0 0.0 5.7632 0.0 0.0 0.0 472.2510470026001 472.2510470026001 44.94341577071616 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.0 + VADPE 5.7632 + + 255 + 1 3.104 80854.2 1.0 639 3461 4099 SUDHL4_400M_050219_1,4102 SUDHL4_400M_050219_1,4102,VADPETRTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4103 19.33 92.0 462630.0 25 0 195640.0 -1 0 44 488.2681410969396 487.2608646303396 1 488.2687560915947 MULTI CID FTMS 0 0 0 4099 436022.46875 0.8781440319901859 -2 0.0399169921875 4 5 G 1 -1 0.27759 0.0 0.0 0.056969 0.0 0.0 359.16557151686146 68.05121790103749 427.21678941789895 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.056969 - 1 + 1 3.104 40860.4 1.0 640 3461 4099 SUDHL4_400M_050219_1,4103 SUDHL4_400M_050219_1,4103, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4106 19.351 756.0 172010.0 25 0 20486.0 + + 17475 KPEGTPQRI 9 125 513.2907660642704 1024.5669791953408 2 513.2909423708916 MULTI CID FTMS 0 0 0 4105 167700.375 0.6183962802274731 -6 0.0981082916259765 1 Unmodified _KPEQPKWL_ ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 25.399314129420983 0.5099049743284904 5 KPEG 4 -1 47.735 0.0 0.0 4.6591 0.0 0.0 0.0 610.3335665338499 610.3335665338499 29.151603310239903 0.0 0.0 0.0 0 0.805462187404089 0.0 0.7742275032520141 0.0 KPEG 4.6591 - 108 + 1 3.104 103007.2 1.0 641 3463 4105 SUDHL4_400M_050219_1,4106 SUDHL4_400M_050219_1,4106,KPEQPKWL False False KPEGTPQRI 19.351066 513.290942370892 1776173.75 4105.0 ENSG00000177853|ENST00000316045|ZNF518A;;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 4.724115530649821 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4107 19.365 800.0 96135.0 25 0 8935.0 + -1 LVLWGATM 8 120 453.73957604625735 905.4645991593148 2 453.7391845583916 MULTI CID FTMS 0 0 0 4105 100172.9375 1.0 0 0.0 2 Oxidation (M) _LVLWGATM(Oxidation (M))_ REV__ENSG00000165996|ENST00000361271|HACD1;REV__nc|ENSG00000165996|B0YJ81-2|HACD1 28.17323086031832 0.4514957916281387 5 T{M(Oxidation (M))|F} 2 -1 34.024 0.0 0.0 3.7576 0.0 0.0 639.3705877841179 0.0 639.3705877841179 0.0 21.549471895720984 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 T{M(Oxidation (M))|F} 3.7576 + + 93 + 1 3.104 62748.4 0.9200000166893004 642 3463 4105 SUDHL4_400M_050219_1,4107 SUDHL4_400M_050219_1,4107,LVLWGATM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4108 19.379 800.0 47074.0 25 0 1804.1 -1 0 71 977.417213676289 2929.2298116290667 3 977.7522460818292 MULTI CID FTMS 0 0 0 4105 85772.96875 0.1033909166472735 -8 0.1230850219726562 3 5 [KQ]EY 4 -1 17.039 0.0 0.0 0.58169 0.0 0.0 0.0 2377.951710392992 2377.951710392992 10.049406363485858 0.0 0.0 0.0 0 0.0 0.0 0.0 0.9247425010840048 [KQ]EY 0.58169 - 80 1 3.104 34348.1 0.6399999856948853 643 3463 4105 SUDHL4_400M_050219_1,4108 SUDHL4_400M_050219_1,4108, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4109 19.393 800.0 53711.0 25 0 4891.8 -1 0 47 874.6430276336283 4368.178755835142 5 875.0438720583916 MULTI CID FTMS 0 0 0 4105 71217.5078125 0.4698040497444378 -10 0.1312026977539062 4 5 PPG 3 -1 16.198 0.0 0.0 0.37082 0.0 0.0 2664.354208512816 1449.6725906077563 4114.026799120572 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPG 0.37082 - 39 + 1 3.104 44079.7 0.6399999856948853 644 3463 4105 SUDHL4_400M_050219_1,4109 SUDHL4_400M_050219_1,4109, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4111 19.399 215.0 388040.0 25 0 22764.0 + 30337 RAFPNKQGY 9 102 540.7829401555903 1079.5513273779804 2 540.7830688357353 MULTI CID FTMS 0 0 0 4110 349959.9375 0.5094257741269603 -12 0.1937370300292968 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 58.6788170122104 0.0268135626297836 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY 9 0 + 49.2 0.0 0.0 4.5575 4.5575 85.727 0.0 0.0 0.0 1.5779259536583154 35.48905380598878 1.5779259536583154 9.208187539523747 0 1.7971062485323517 0.0 0.0 0.3494850021680094 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]K[AG]GY;[HT]QGTN{[VA]|[{I|L}G]}RP;[HT]QGTN{[VA]|[{I|L}G]}PR;AA[{I|L}A]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KQGY;[HT]QGT{[VA]|[{I|L}G]}NRP;[HT]QGT{[VA]|[{I|L}G]}NPR;[HT][AG]GTN{[VA]|[{I|L}G]}RP;[HT]QGTGG{[VA]|[{I|L}G]}RP;[HT][AG]GTN{[VA]|[{I|L}G]}PR 4.5575;3.7045;3.1048;2.9119;2.5275;2.4573;2.2644;2.2559;2.2559;2.0629 +;-;-;-;-;-;-;-;-;- + 426 1 3.104 66803.1 1.0 645 3464 4110 SUDHL4_400M_050219_1,4111 SUDHL4_400M_050219_1,4111,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4112 19.401 62.0 882010.0 25 0 74896.0 + 42515 VTLDSPVLY 9 76 503.7747441625936 1005.5349353919872 2 503.7747070193291 MULTI CID FTMS 0 0 0 4110 651843.0625 0.7723849876845585 -2 0.0624637603759765 2 Unmodified _VTLDSPVLY_ REV__ENSG00000139112|ENST00000266458|GABARAPL1;REV__ENSG00000170296|ENST00000302386|GABARAP;REV__nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 34.10243960390752 0.1078313939113124 5 VT{I|L}DTTQTK 9 -1 + 85.143 0.0 0.0 8.4674 8.4674 91.777 0.0 0.0 0.0 67.86297847284061 11.439389643433628 11.439389643433628 6.478174818886373 0 0.4247425010840047 2.0 0.805462187404089 0.4247425010840047 VT{I|L}DTTQTK;VT{I|L}MWQTK;VT{I|L}DTT[AG]TK;VT{I|L}MW[AG]TK;VT{I|L}DT[YV][VP];VT{I|L}HH{[CT]|[{M(Oxidation (M))|F}G]}[VP];VT{I|L}[VS][YE][VP] 8.4674;7.8232;7.5517;6.9021;5.56;4.1189;3.6444 -;-;-;-;-;-;- 266 + 1 3.104 49744.9 1.0 646 3464 4110 SUDHL4_400M_050219_1,4112 SUDHL4_400M_050219_1,4112,VTLDSPVLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4113 19.406 266.0 325840.0 25 0 56656.0 + -1 IQRLETMK 8 89 517.7868598114537 0 517.7869750857353 PEAK CID FTMS 0 0 0 4110 242414.21875 1.0 0 0.0 3 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.3662555986329114 5 KTT 3 -1 33.729 0.0 0.0 3.2634 0.0 0.0 63.997848185931566 636.3470693787373 700.3449175646689 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 1.3494850021680094 0.0 KTT 3.2634 - 102 + 1 3.104 70356.7 1.0 647 3464 4110 SUDHL4_400M_050219_1,4113 SUDHL4_400M_050219_1,4113,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4116 19.414 66.0 661330.0 25 0 90134.0 + 42498 VTKPVGGNY 9 74 467.753705570814 933.492858208428 2 467.7534057497978 MULTI CID FTMS 0 0 0 4115 875693.125 0.5268106985161939 3 -0.0584640502929687 1 Unmodified _VTKPVGGNY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 37.97399986684836 0.0865783450051559 5 VTK[VP]NNY 8 2 + 63.225 0.0 0.0 6.7729 6.7729 92.863 0.0 0.0 0.0 47.81357210935475 14.904630595263413 14.904630595263413 9.262137858390815 0 0.3807196863200844 1.3010299956639813 0.0 0.7302046884880937 VTK[VP]NNY;VTK[VP]GGNY;VTK[VP]NGGY 6.7729;5.7807;5.4063 -;+;- + 72 + 1 3.104 42447.7 1.0 648 3466 4115 SUDHL4_400M_050219_1,4116 SUDHL4_400M_050219_1,4116,VTKPVGGNY True True VTKPVGGNY 19.414446 467.753405749798 7000481.5 4115.0 nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 7.063192685445149 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4117 19.42 307.0 223110.0 25 0 18994.0 + 30344 RAFPNKQGY 9 117 360.8578392336925 1079.5516883012776 3 360.8575317263603 MULTI CID FTMS 0 0 0 4115 141623.234375 0.4546064941527868 -9 0.173685073852539 2 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 32.30548876998284 0.1201446275138228 5 PN{I|L} 3 7 24.693 0.0 0.0 2.2873 0.0 0.0 374.2070973873686 378.1420382135376 752.3491356009062 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.4247425010840047 PN{I|L} 2.2873 - 85 + 1 3.104 63746.4 1.0 649 3466 4115 SUDHL4_400M_050219_1,4117 SUDHL4_400M_050219_1,4117,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4120 19.44 800.0 120930.0 25 0 19582.0 27256 PHAELVPTEC 10 98 548.258146015654 1094.501739098108 2 548.2584716677666 MULTI CID FTMS 0 0 0 4119 87380.8671875 0.6744411330332641 -1 0.0040283203125 1 Unmodified _PHAELVPTEC_ chr2:241112439-241115022|42|11.76|0.58|4.34|-|ENST00000358649|PASK,PASK;ENSG00000115687|ENST00000234040|PASK;ENST00000493544.1_1_2:242054361-242072488:-|nuORF;nc|ENSG00000115687|Q96RG2-2|PASK;nc|ENSG00000115687|Q96RG2-4|PASK 30.63653989081413 0.2803493085145199 5 STNG{I|L}RP 7 8 55.878 0.0 0.0 5.1053 0.0 0.0 351.1083990236304 0.0 351.1083990236304 0.0 38.67291066325485 0.0 0.0 0 0.7302046884880937 0.0 0.3494850021680094 0.7614393726401688 STNG{I|L}RP 5.1053 - 257 + 1 3.099 80403.3 0.5099999904632568 650 3468 4119 SUDHL4_400M_050219_1,4120 SUDHL4_400M_050219_1,4120,PHAELVPTEC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4121 19.454 800.0 81241.0 25 0 6518.1 + 2569 ASGPSTANY 9 81 867.3852745485987 866.3779980819986 1 867.3843871951103 MULTI CID FTMS 0 0 0 4119 132473.0 0.4468273535156353 7 -0.2267704010009765 2 Unmodified _ASGPSTANY_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 56.17704186161178 0.0281986971544335 5 {[SA]|[TG]}PGSQSAY 9 5 + 55.6 0.0 0.0 6.4175 6.4175 81.846 0.0 0.0 0.0 5.3731109251622655 12.689097685623524 5.3731109251622655 0.4968123769230459 0 0.8807196863200843 0.0 2.1549471895720984 0.2302046884880938 {[SA]|[TG]}PGSQSAY;{[SA]|[TG]}PGSAGSAY;{[SA]|[TG]}PSGQSAY;{[SA]|[TG]}PSGAGSAY;{[SA]|[TG]}PGTNSAY;{[SA]|[TG]}PGTGGSAY;{[SA]|[TG]}PGSATNY;{[SA]|[TG]}PSQGSAY;[QA]ANA{[ET]|[MV]}Y;{[SA]|[TG]}PSANSAY 6.4175;6.3602;5.4472;5.3899;5.2374;5.1801;5.1455;4.4983;4.3144;4.2672 -;-;-;-;-;-;-;-;-;- 945 1 3.099 51129.2 0.550000011920929 651 3468 4119 SUDHL4_400M_050219_1,4121 SUDHL4_400M_050219_1,4121,ASGPSTANY True False ASGPSTANY 19.454294 867.38438719511 1430079.0 4119.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C -0.2886432905991872 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4122 19.468 800.0 24872.0 25 0 2016.7 -1 0 45 757.9802441734919 2270.918903120676 3 758.3138305544853 MULTI CID FTMS 0 0 0 4119 76959.0234375 1.0 0 0.0 3 5 Y 1 -1 6.9897 0.0 0.0 0.30779 0.0 0.0 1139.4352127904006 965.3977755182248 2104.8329883086253 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.30779 - 22 + 1 3.099 22673.9 0.449999988079071 652 3468 4119 SUDHL4_400M_050219_1,4122 SUDHL4_400M_050219_1,4122, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4125 19.477 44.0 926010.0 25 0 76896.0 -1 ESATITCLV 9 65 497.2498129556803 992.4850729781606 2 497.2498962283134 MULTI CID FTMS 0 0 0 4124 1085770.25 0.8401318651643488 -3 0.0520782470703125 1 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 48.345845343767074 0.0439967357579942 5 {[ES]|[DT]|[{I|L}C]}ATP{I|L}T{M(Oxidation (M))|F}K 9 -1 + 49.886 0.0 0.0 5.0264 5.0264 90.76 0.0 0.0 0.0 33.687917343369406 11.891538264907055 11.891538264907055 40.85593167151287 0 1.086696871556164 0.0 0.3807196863200844 0.1803115997617927 {[ES]|[DT]|[{I|L}C]}ATP{I|L}T{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}A{[QV]|[N{I|L}]|[RA]|[KV]}{[QG]|[NA]}{M(Oxidation (M))|F}K 5.0264;0.90982 -;- 82 + 1 3.099 36359.4 1.0 653 3470 4124 SUDHL4_400M_050219_1,4125 SUDHL4_400M_050219_1,4125,ESATITCLV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 4126 19.49 770.0 155670.0 25 0 23472.0 -1 0 56 932.63400963213 3726.50693266212 4 933.135302722454 MULTI CID FTMS 0 0 0 4124 327097.84375 0.713624264584867 7 -0.2250385284423828 2 5 Y[DC]{M(Oxidation (M))|F}G 5 -1 8.6844 0.0 0.0 0.23304 0.0 0.0 1619.58256850372 1518.707162430754 3138.2897309344744 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 Y[DC]{M(Oxidation (M))|F}G 0.23304 - 35 + 1 3.099 107093.0 1.0 654 3470 4124 SUDHL4_400M_050219_1,4126 SUDHL4_400M_050219_1,4126, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4127 19.497 390.0 201190.0 25 0 27027.0 + 45187 YQSDPSGNY 9 91 515.7095036667213 1029.4044544002425 2 515.7095825076103 MULTI CID FTMS 0 0 0 4124 175544.984375 1.0 0 0.0 3 Unmodified _YQSDPSGNY_ ENSG00000041357|ENST00000044462|PSMA4;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4 36.506200033944 0.094635877243972 5 [YQ]SDPSGNY 9 0 + 42.022 0.0 0.0 4.0822 4.0822 85.155 0.0 0.0 0.0 9.2672140977094 10.330145895351851 9.2672140977094 9.2672140977094 0 0.6069758080123702 0.0 0.2614393726401688 0.3494850021680094 + + [YQ]SDPSGNY;[SG]{M(Oxidation (M))|F}SDPSGNY;[PS][DG]YASGNY;[MT]G{[ET]|[MV]}ASGNY;[VG]SD[MT]SGNY;{[YD]|[{M(Oxidation (M))|F}M]}{[QS]|[NT]}PSGNY;[SG][DP]YASGNY;AA{M(Oxidation (M))|F}{[ET]|[MV]}ASGNY;[PS]{[CA]|SS}[MT]SGNY;{[QD]|[EN]|[WG]|[KD]|[RS]}D[MT]SGNY 4.0822;3.1819;2.8756;2.837;2.1471;2.0425;1.6417;1.5142;1.3464;1.2754 +;-;-;-;-;-;-;-;-;- + 279 1 3.099 64797.0 1.0 655 3470 4124 SUDHL4_400M_050219_1,4127 SUDHL4_400M_050219_1,4127,YQSDPSGNY True True YQSDPSGNY 19.497265 515.70958250761 925271.625 4124.0 ENSG00000041357|ENST00000044462|PSMA4;;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;;nc|ENSG00000041357|P25789-2|PSMA4 7.747364362080892 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4128 19.506 521.0 149130.0 25 0 42337.0 + 23703 VTLDFMLPR 9 103 554.3174435614784 1106.6203341897567 2 554.3171874880791 MULTI CID FTMS 0 0 0 4124 83896.5859375 0.8190372122924342 1 -0.0343265533447265 4 Unmodified _LTTLRYANR_ ENST00000489585.5_1_1:235926109-235996891:-|nuORF;ENSG00000143669|ENST00000389793|LYST;nc|ENSG00000143669|Q99698-2|LYST 7.289230182591677 0.6602208344931196 5 PPR 3 8 16.911 0.0 0.0 1.5282 0.0 0.0 738.3952803340911 0.0 738.3952803340911 0.0 0.4009906763229054 0.0 0.0 0 0.0 0.0 0.0 0.0 PPR 1.5282 - 163 + 1 3.099 63195.2 1.0 656 3470 4124 SUDHL4_400M_050219_1,4128 SUDHL4_400M_050219_1,4128,LTTLRYANR False False VTLDFMLPR 19.506444 554.317187488079 263209.5625 4124.0 ENST00000489585.5_1_1:235926109-235996891:-|nuORF;;ENSG00000143669|ENST00000389793|LYST;;nc|ENSG00000143669|Q99698-2|LYST 4.630134105682373 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4130 19.523 800.0 53571.0 25 0 14336.0 -1 0 31 1094.110811825307 3279.310606076121 3 1094.780078113079 MULTI CID FTMS 0 0 0 4129 104781.0078125 0.3270536146774744 8 -0.1985588073730468 1 5 P 1 -1 6.9897 0.0 0.0 0.21315 0.0 0.0 1328.4895134020965 1850.758737432288 3179.248250834384 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.21315 - 5 + 1 3.099 47721.2 0.5099999904632568 657 3471 4129 SUDHL4_400M_050219_1,4130 SUDHL4_400M_050219_1,4130, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4131 19.537 800.0 148480.0 25 0 27153.0 + 32215 RVVEGNHTVY 10 99 587.3052394544056 1172.5959259756112 2 587.3044921755791 MULTI CID FTMS 0 0 0 4129 117408.015625 1.0 0 0.0 2 Unmodified _RVVEGNHTVY_ ENSG00000108669|ENST00000446868|CYTH1;nc|ENSG00000108669|Q15438-2|CYTH1;nc|ENSG00000108669|Q15438-3|CYTH1 41.95555342248728 0.1369168616057562 5 {[TV]|[{I|L}S]}{[WN]|[YH]}[YK]TVY 9 6 + 45.613 0.0 0.0 3.8899 3.8899 87.566 0.0 0.0 0.0 0.2191590513373853 35.15539695625556 0.2191590513373853 45.61297186186231 0 0.8494850021680094 1.6989700043360187 1.0 0.3807196863200844 {[TV]|[{I|L}S]}{[WN]|[YH]}[YK]TVY 3.8899 - 88 1 3.099 93633.2 0.5400000214576721 658 3471 4129 SUDHL4_400M_050219_1,4131 SUDHL4_400M_050219_1,4131,RVVEGNHTVY False True RVVEGNHTVY 19.53669 587.304492175579 594384.5 4129.0 ENSG00000108669|ENST00000446868|CYTH1;;nc|ENSG00000108669|Q15438-2|CYTH1;;nc|ENSG00000108669|Q15438-3|CYTH1 7.366189638773601 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4132 19.551 800.0 28878.0 25 0 2243.1 -1 0 58 733.0644217626256 2928.228581184102 4 733.3131591677666 MULTI CID FTMS 0 0 0 4129 66347.265625 1.0 0 0.0 3 5 [KQ]EET 5 -1 16.995 0.0 0.0 0.58038 0.0 0.0 0.0 2309.920389615996 2309.920389615996 14.776296993281404 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [KQ]EET 0.58038 - 99 1 3.099 25855.9 0.4000000059604645 659 3471 4129 SUDHL4_400M_050219_1,4132 SUDHL4_400M_050219_1,4132, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4134 19.555 7.9 5303600.0 25 0 557150.0 + 12134 GQKPGGSDF 9 61 446.7117943752351 891.4090358172701 2 446.7117797732353 MULTI CID FTMS 0 0 0 4133 7184638.5 0.940080124764134 1 -0.0588035583496093 1 Unmodified _GQKPGGSDF_ ENSG00000128989|ENST00000249822|ARPP19;ENSG00000143420|ENST00000369014|ENSA;nc|ENSG00000128989|P56211-2|ARPP19;nc|ENSG00000143420|O43768-2|ENSA;nc|ENSG00000143420|O43768-3|ENSA;nc|ENSG00000143420|O43768-4|ENSA;nc|ENSG00000143420|O43768-5|ENSA;nc|ENSG00000143420|O43768-6|ENSA;nc|ENSG00000143420|O43768-7|ENSA;nc|ENSG00000143420|O43768-8|ENSA;nc|ENSG00000143420|O43768-9|ENSA 24.020572477871973 0.2255576514309169 5 [NP]SDK{[QG]|[NA]}{M(Oxidation (M))|F} 8 7 + 34.703 0.0 0.0 3.893 3.893 80.737 0.0 0.0 0.0 3.098943791441968 15.890625187447966 3.098943791441968 6.211375162600703 0 0.5 0.0 0.7302046884880937 0.3807196863200844 [NP]SDK{[QG]|[NA]}{M(Oxidation (M))|F};{[QG]|[NA]}[Q{I|L}]D{[QG]|[NA]}{M(Oxidation (M))|F};[NP]SKD{[QG]|[NA]}{M(Oxidation (M))|F};[AG]G[Q{I|L}]D{[QG]|[NA]}{M(Oxidation (M))|F};[KP][NS]D{[QG]|[NA]}{M(Oxidation (M))|F} 3.893;3.1962;3.1633;2.6851;1.9327 -;-;-;-;- 87 1 3.099 40723.0 1.0 660 3472 4133 SUDHL4_400M_050219_1,4134 SUDHL4_400M_050219_1,4134,GQKPGGSDF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4135 19.571 800.0 96718.0 25 0 23857.0 -1 0 48 1198.8035729439691 3593.388889432108 3 1199.806079089642 MULTI CID FTMS 0 0 0 4133 145566.09375 0.5105075599941169 4 -0.1347980499267578 2 5 T 1 -1 9.2917 0.0 0.0 0.25858 0.0 0.0 2751.0071278127702 738.3109224908811 3489.3180503036515 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 T 0.25858 - 65 + 1 3.099 69454.8 0.800000011920929 661 3472 4133 SUDHL4_400M_050219_1,4135 SUDHL4_400M_050219_1,4135, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4136 19.582 678.0 201730.0 25 0 7733.9 + 30910 RITENTSQY 9 134 556.273201762224 1110.5318505912478 2 556.2734252810478 MULTI CID FTMS 0 0 0 4133 162803.40625 0.531997234276791 -1 0.0439872741699218 3 Unmodified _RITENTSQY_ ENSG00000132603|ENST00000254940|NIP7;ENST00000565034.1_1_16:69373956-69375289:+|nuORF 47.594388314883695 0.0456443387682827 5 [R{I|L}]TENTSQY 9 0 + 69.486 0.0 0.0 6.257 6.257 88.93 0.0 0.0 0.0 3.65279269351241 34.12794683835357 3.65279269351241 8.46279041616178 0 0.8807196863200843 0.0 0.9247425010840048 0.3807196863200844 + + [R{I|L}]TENTSQY;[AG]S[RK]NGMQY;[R{I|L}]TENTS[AG]Y;[R{I|L}]TEGGTSQY;[AG]S[RK]GGGMQY;[AG]S[RK]NGM[AG]Y;{[QD]|[EN]|[WG]|[KD]|[RS]}QKNTSQY;[R{I|L}]TEGGTS[AG]Y;{[QS]|[NT]}[RK]NGMQY;[AG]S[Q{I|L}]V[{M(Oxidation (M))|F}V]QY 6.257;5.495;5.4279;5.4279;4.6697;4.6697;4.6512;4.6026;4.4612;4.371 +;-;-;-;-;-;-;-;-;- + 1109 1 3.099 108570.7 1.0 662 3472 4133 SUDHL4_400M_050219_1,4136 SUDHL4_400M_050219_1,4136,RITENTSQY True True RITENTSQY 19.582335 556.273425281048 1250037.375 4133.0 ENST00000565034.1_1_16:69373956-69375289:+|nuORF;;ENSG00000132603|ENST00000254940|NIP7 7.497200012207031 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4137 19.596 780.0 184430.0 25 0 25835.0 -1 0 130 464.2523527558655 463.2450762892655 1 464.2518798708916 MULTI CID FTMS 0 0 0 4133 120745.1328125 0.0193954998718961 55 -0.7656879425048828 4 5 [VS]A{M(Oxidation (M))|F} 4 -1 20.671 0.0 0.0 4.4622 0.0 0.0 0.0 56.05014091541719 56.05014091541719 9.833298733127888 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.1462566630072955 0.0 [VS]A{M(Oxidation (M))|F} 4.4622 - 58 1 3.099 115543.2 1.0 663 3472 4133 SUDHL4_400M_050219_1,4137 SUDHL4_400M_050219_1,4137, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4138 19.61 800.0 84939.0 25 0 4651.1 -1 0 82 628.4922128683635 3137.4246820088174 5 629.0946533083916 MULTI CID FTMS 0 0 0 4133 68953.1640625 0.8565399300133711 -1 0.0439872741699218 5 5 VWDPST 6 -1 31.146 0.0 0.0 0.99274 0.0 0.0 1318.587648754923 1130.509367525308 2449.097016280231 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VWDPST 0.99274 - 207 + 1 3.099 58418.5 0.8700000047683716 664 3472 4133 SUDHL4_400M_050219_1,4138 SUDHL4_400M_050219_1,4138, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4140 19.615 56.0 682690.0 25 0 75222.0 + 17635 KPTAAFHLL 9 59 499.29336522974654 996.5721775262932 2 499.2932311892509 MULTI CID FTMS 0 0 0 4139 558983.9375 0.4482207470426804 8 -0.116128921508789 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 7.289230182591677 0.6602208344931196 5 KPT 3 -1 35.005 0.0 0.0 3.5125 0.0 0.0 0.0 667.3542620142664 667.3542620142664 18.093859345357185 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 KPT 3.5125 + + 15 + 1 3.082 36762.0 1.0 665 3473 4139 SUDHL4_400M_050219_1,4140 SUDHL4_400M_050219_1,4140,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4141 19.618 209.0 255770.0 25 0 36139.0 + 39298 VADPETRTV 9 69 494.25920832570415 986.5038637182084 2 494.2592346072197 MULTI CID FTMS 0 0 0 4139 139602.828125 0.3565684952510911 4 -0.087921142578125 2 Unmodified _VADPETRTV_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 24.99096001346401 0.2132109383330889 5 VADPE 5 4 69.068 0.0 0.0 7.0013 0.0 0.0 0.0 472.2508638971313 472.2508638971313 62.07834387816234 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + VADPE 7.0013 + + 101 + 1 3.082 45693.2 1.0 666 3473 4139 SUDHL4_400M_050219_1,4141 SUDHL4_400M_050219_1,4141,VADPETRTV False True VADPETRTV 19.61848 494.25923460722 4651684.5 4139.0 nc|ENSG00000039650|Q96T60-2|PNKP;;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;;ENSG00000039650|ENST00000322344|PNKP;;ENST00000595792.1_1_19:50369586-50370764:-|nuORF 5.357881704966228 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4143 19.624 182.0 79543.0 25 0 5818.5 -1 0 33 977.417213676289 2929.2298116290667 3 977.7514526247978 MULTI CID FTMS 0 0 0 4142 452170.6875 0.5450474962329301 3 -0.0790367126464843 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 3.082 19312.4 1.0 667 3474 4142 SUDHL4_400M_050219_1,4143 SUDHL4_400M_050219_1,4143, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4144 19.637 757.0 186420.0 25 0 7743.2 + 32169 RVSNVKSVY 9 136 526.298572278474 1050.582591623748 2 526.2979614138603 MULTI CID FTMS 0 0 0 4142 105611.140625 0.3403399697259088 -4 0.1460018157958984 2 Unmodified _RVSNVKSVY_ ENSG00000104738|ENST00000649973|MCM4 34.221707139014875 0.1071766711162635 5 [VS]GKRVGSVY 10 5 + 73.679 0.0 0.0 7.0132 7.0132 84.882 0.0 0.0 0.0 19.57036798907771 16.53212513775344 16.53212513775344 1.7609125905567993 0 0.9247425010840048 1.6989700043360187 0.5819755355160706 0.75 [VS]GKRVGSVY;[VS]KGRVGSVY;[VS][RN]VKSVY;[VS]G{[NV]|[RG]}VKSVY;[VS]V[RN]KSVY;[VS]GK[VG]RSVY;[VS]KG[VG]RSVY;{[QD]|[EN]|[WG]|[KD]|[RS]}KRVGSVY;[VP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VKSVY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]}VKSVY 7.0132;6.8455;6.5086;6.3897;6.341;5.8014;5.6338;5.1503;4.8838;4.5269 -;-;-;-;-;-;-;-;-;- 1005 1 3.082 111664.6 1.0 668 3474 4142 SUDHL4_400M_050219_1,4144 SUDHL4_400M_050219_1,4144,RVSNVKSVY True True RVSNVKSVY 19.63733 526.29796141386 1140672.25 4142.0 ENSG00000104738|ENST00000649973|MCM4 5.171452681223552 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4145 19.651 800.0 40148.0 25 0 11356.0 -1 0 27 1179.4622016187818 3535.364775456545 3 1179.795214831829 MULTI CID FTMS 0 0 0 4142 84914.2890625 0.5103616425440162 -7 0.1980800628662109 3 5 E 1 -1 5.4846 0.0 0.0 0.15513 0.0 0.0 2879.1373107122085 524.1599825494749 3403.2972932616835 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15513 - 4 + 1 3.082 37705.4 0.5699999928474426 669 3474 4142 SUDHL4_400M_050219_1,4145 SUDHL4_400M_050219_1,4145, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4147 19.656 56.0 688840.0 25 0 36534.0 + 30338 RAFPNKQGY 9 78 540.7829401555903 1079.5513273779804 2 540.7831909060478 MULTI CID FTMS 0 0 0 4146 644479.875 0.9381492681033572 -1 0.0327186584472656 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 32.30548876998284 0.1201446275138228 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY 9 0 + 33.292 0.0 0.0 3.0839 3.0839 82.77 0.0 0.0 0.0 4.762036441594198 16.302652907819642 4.762036441594198 9.208187539523756 0 1.0682503180159344 0.0 0.0 0.4247425010840047 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]K[AG]GY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC][RV]QGY 3.0839;2.2309;1.0233 +;-;- + 52 1 3.082 32203.7 1.0 670 3475 4146 SUDHL4_400M_050219_1,4147 SUDHL4_400M_050219_1,4147,RAFPNKQGY True True RAFPNKQGY 19.65563 540.783190906048 211262790.0 4146.0 nc|ENSG00000154473|O43684-2|BUB3;;ENSG00000154473|ENST00000368865|BUB3 7.468155066172282 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4148 19.669 800.0 85975.0 25 0 5501.5 -1 0 58 874.6430276336283 4368.178755835142 5 874.8426391482353 MULTI CID FTMS 0 0 0 4146 106276.3125 0.8059426874899134 1 -0.0343914031982421 2 5 WS[QP] 4 -1 21.198 0.0 0.0 0.48528 0.0 0.0 3851.938258695748 0.0 3851.938258695748 0.0 4.9999999999999964 0.0 0.0 0 0.5 0.0 0.0 0.0 WS[QP] 0.48528 - 57 1 3.082 60391.8 0.8100000023841858 671 3475 4146 SUDHL4_400M_050219_1,4148 SUDHL4_400M_050219_1,4148, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4149 19.672 107.0 394130.0 25 0 90722.0 + 31815 RTAGPHTQF 9 70 507.7603318648516 1013.5061107965032 2 507.7597534060478 MULTI CID FTMS 0 0 0 4146 252371.96875 0.8000177321562748 -3 0.1004066467285156 3 Unmodified _RTAGPHTQF_ ENSG00000008838|ENST00000394128|MED24;ENST00000491466.5_1_17:38175784-38176226:-|nuORF;nc|ENSG00000008838|O75448-2|MED24 15.248480904072842 0.4239247793462406 5 [QT]RPHTQ{M(Oxidation (M))|F} 8 3 + 44.078 0.0 0.0 4.3491 4.3491 85.784 0.0 0.0 0.0 4.6040937697618745 37.0885127703319 4.6040937697618745 9.262137858390808 0 0.0 0.0 0.8494850021680094 0.0 [QT]RPHTQ{M(Oxidation (M))|F};[QT]RPHT[AG]{M(Oxidation (M))|F};[RP][QT]HTQ{M(Oxidation (M))|F};[QT]RPHG[TA]{M(Oxidation (M))|F};[QT]RPQ[HT]{M(Oxidation (M))|F};[RP][QT]HT[AG]{M(Oxidation (M))|F};[QT]RP[AG][HT]{M(Oxidation (M))|F};[RP][QT]HG[TA]{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[KC][YR]Q{M(Oxidation (M))|F};[RP][QT]Q[HT]{M(Oxidation (M))|F} 4.3491;3.4352;2.6223;2.4221;1.9062;1.7084;0.99231;0.69529;0.41688;0.17938 -;-;-;-;-;-;-;-;-;- 150 1 3.082 39178.5 1.0 672 3475 4146 SUDHL4_400M_050219_1,4149 SUDHL4_400M_050219_1,4149,RTAGPHTQF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4150 19.686 800.0 81193.0 25 0 13407.0 + 44449 YMMKKSNYFR 10 78 684.3318182846965 1366.649083636193 2 684.3322021365166 MULTI CID FTMS 0 0 0 4146 108522.09375 1.0 0 0.0 4 Unmodified _YMMKKSNYFR_ REV__ENST00000406606.7_3_9:136627407-136627686:-|nuORF 5.731851221503515 0.7001233259664787 5 ENAWDP{[VA]|[{I|L}G]}AR 10 -1 65.711 0.0 0.0 4.8082 0.0 0.0 239.13219018091792 0.0 239.13219018091792 0.0 48.40366047130118 0.0 0.0 0 2.6549471895720984 0.0 0.0 0.4247425010840047 ENAWDP{[VA]|[{I|L}G]}AR 4.8082 - 324 + 1 3.082 51707.0 0.8999999761581421 673 3475 4146 SUDHL4_400M_050219_1,4150 SUDHL4_400M_050219_1,4150,YMMKKSNYFR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4152 19.692 150.0 339510.0 25 0 52565.0 + 42439 VTFRRQEA 8 80 503.7747441625936 1005.5349353919872 2 503.7744933962822 MULTI CID FTMS 0 0 0 4151 216129.3125 0.2560969748352343 10 -0.0733718872070312 1 Unmodified _VTFRRQEA_ REV__ENST00000456948.5_1_7:26242171-26246069:+|nuORF 24.020572477871973 0.5389365498350341 5 VT{I|L}DT 5 -1 56.999 0.0 0.0 5.6686 0.0 0.0 0.0 473.2374666803344 473.2374666803344 38.92729312648123 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VT{I|L}DT 5.6686 - 95 + 1 3.066 45597.2 1.0 674 3476 4151 SUDHL4_400M_050219_1,4152 SUDHL4_400M_050219_1,4152,VTFRRQEA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4153 19.697 276.0 349430.0 25 0 43275.0 + 30345 RAFPNKQGY 9 122 360.8578392336925 1079.5516883012776 3 360.8575012087822 MULTI CID FTMS 0 0 0 4151 288660.8125 0.9265928754490071 1 -0.0119266510009765 2 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 46.020951573049366 0.0490941689151868 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PNKQGY 9 0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F} + + 30.18 10.756 2.8742 2.7956 2.7956 53.828 0.0 0.0 0.0 0.0 8.979076268158543 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.7614393726401688 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PNKQGY 2.7956 + + 192 + 1 3.066 85578.5 1.0 675 3476 4151 SUDHL4_400M_050219_1,4153 SUDHL4_400M_050219_1,4153,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4157 19.721 800.0 124190.0 25 0 16412.0 -1 0 56 547.0411445426447 2184.1354723041786 4 547.2921020388603 MULTI CID FTMS 0 0 0 4156 47998.41796875 0.6478399719260093 1 -0.0163555145263671 1 5 APY 3 -1 28.188 0.0 0.0 1.2906 0.0 0.0 0.0 1849.9594979561057 1849.9594979561057 14.208187539523747 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 APY 1.2906 - 27 + 1 3.066 84074.8 0.5099999904632568 676 3479 4156 SUDHL4_400M_050219_1,4157 SUDHL4_400M_050219_1,4157, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4160 19.73 81.0 571080.0 25 0 37763.0 -1 ESATITCLV 9 91 497.2498129556803 992.4850729781606 2 497.2502014040947 MULTI CID FTMS 0 0 0 4159 564718.0625 0.4369595125120828 8 -0.0537910461425781 1 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 57.47134341890925 0.0274820932774257 5 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 43.32 0.0 0.0 4.3648 4.3648 83.721 0.0 0.0 0.0 5.642492736872597 8.944125865649006 5.642492736872597 8.944125865649006 0 1.1549471895720984 0.0 0.8807196863200843 0.0 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}ATVV[TA]{[ES]|[DT]|[{I|L}C]};[TA]DTVV[TA]{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG][{I|L}P]T{M(Oxidation (M))|F}K;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}[PS]K;{[ES]|[DT]|[{I|L}C]}[W{M(Oxidation (M))|F}]{I|L}[PS]K 4.3648;3.4636;2.9328;1.8426;0.50424;0.4356 -;-;-;-;-;- 115 + 1 3.066 43646.9 1.0 677 3481 4159 SUDHL4_400M_050219_1,4160 SUDHL4_400M_050219_1,4160,ESATITCLV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 4164 19.755 800.0 47412.0 25 0 10729.0 -1 0 42 674.3174321356265 3366.550778345132 5 674.7193481326103 MULTI CID FTMS 0 0 0 -1 0 1 5 AQ 2 -1 10.969 0.0 0.0 0.32583 0.0 0.0 175.11066911044446 2989.32019791867 3164.430867029115 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AQ 0.32583 - 7 + 1 3.066 35857.4 0.4600000083446502 678 3484 4163 SUDHL4_400M_050219_1,4164 SUDHL4_400M_050219_1,4164, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4167 19.771 575.0 155180.0 25 0 13216.0 17530 KPLNSLFHL 9 105 534.8118491736549 1067.6091454141097 2 534.8115112185478 MULTI CID FTMS 0 0 0 4166 116758.9453125 0.2186279345303973 -12 0.140481948852539 1 Unmodified _KPLNSLFHL_ ENST00000431189.1_1_7:130652197-130668861:-|nuORF 30.63653989081413 0.1413794767160703 5 K{I|L}PE[RV]{M(Oxidation (M))|F}D 8 7 48.397 0.0 0.0 4.5332 0.0 0.0 0.0 80.05121027164296 80.05121027164296 32.159809847166514 0.0 0.0 0.0 0 0.7742275032520141 0.0 1.1549471895720984 0.0 K{I|L}PE[RV]{M(Oxidation (M))|F}D 4.5332 - 163 + 1 3.07 74916.8 1.0 679 3486 4166 SUDHL4_400M_050219_1,4167 SUDHL4_400M_050219_1,4167,KPLNSLFHL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4171 19.796 800.0 33518.0 25 0 11005.0 -1 0 22 1196.4748799036834 3586.4028103112505 3 1197.142749011517 MULTI CID FTMS 0 0 0 4170 88632.15625 0.4841657631968475 -6 0.0449848175048828 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 3.07 35137.3 0.3400000035762787 680 3489 4170 SUDHL4_400M_050219_1,4171 SUDHL4_400M_050219_1,4171, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4174 19.816 800.0 19697.0 25 0 6518.6 -1 0 21 1096.691089757535 4382.735253163741 4 1097.446704089642 MULTI CID FTMS 0 0 0 4173 87016.8515625 0.9570853218624492 -11 0.0782470703125 1 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.15948 0.0 0.0 2860.009863614716 1372.6491631751242 4232.65902678984 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.15948 - 3 + 1 3.07 30752.2 0.3799999952316284 681 3491 4173 SUDHL4_400M_050219_1,4174 SUDHL4_400M_050219_1,4174, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4176 19.821 82.0 664920.0 25 0 51501.0 + 12135 GQKPGGSDF 9 83 446.7117943752351 891.4090358172701 2 446.7116577029228 MULTI CID FTMS 0 0 0 4175 640436.5625 0.0837984657931659 21 -0.389841079711914 1 Unmodified _GQKPGGSDF_ ENSG00000128989|ENST00000249822|ARPP19;ENSG00000143420|ENST00000369014|ENSA;nc|ENSG00000128989|P56211-2|ARPP19;nc|ENSG00000143420|O43768-2|ENSA;nc|ENSG00000143420|O43768-3|ENSA;nc|ENSG00000143420|O43768-4|ENSA;nc|ENSG00000143420|O43768-5|ENSA;nc|ENSG00000143420|O43768-6|ENSA;nc|ENSG00000143420|O43768-7|ENSA;nc|ENSG00000143420|O43768-8|ENSA;nc|ENSG00000143420|O43768-9|ENSA 18.1463463914782 0.3454829746528889 5 {[QG]|[NA]}K{M(Oxidation (M))|F}{[YC]|[HE]}{M(Oxidation (M))|F} 7 5 {[QG]|[NA]} + + 26.51 8.4814 4.5826 2.9739 2.9739 54.101 0.0 0.0 0.0 0.0 15.579919469776868 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 {[QG]|[NA]}K{M(Oxidation (M))|F}{[YC]|[HE]}{M(Oxidation (M))|F} 2.9739 - 31 + 1 3.07 46093.6 1.0 682 3492 4175 SUDHL4_400M_050219_1,4176 SUDHL4_400M_050219_1,4176,GQKPGGSDF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4179 19.841 800.0 60649.0 25 0 4517.1 -1 SETRDPTGFCQ 11 44 649.278970155423 0 649.2785522341728 PEAK CID FTMS 0 0 0 -1 0 1 Carbamidomethyl (C) _SETRDPTGFC(Carbamidomethyl (C))Q_ ENST00000518649.5_1_14:91626614-91647575:+|nuORF 4.189502756095605 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.07 46198.5 0.449999988079071 683 3494 4178 SUDHL4_400M_050219_1,4179 SUDHL4_400M_050219_1,4179,SETRDPTGFCQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4180 19.845 208.0 369770.0 25 0 131210.0 29509 QLLEMRLT 8 66 502.2831805718114 0 502.2831909060478 PEAK CID FTMS 0 0 0 4178 186398.515625 0.5504588193114319 -56 0.7653713226318359 2 Unmodified _QLLEMRLT_ ENSG00000197892|ENST00000524189|KIF13B 2.302733041254933 0.5920993303473642 5 A 1 8 3.9794 0.0 0.0 0.39693 0.0 0.0 722.5076320403042 205.97908960513908 928.4867216454433 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.39693 - 2 + 1 3.07 66299.3 1.0 684 3494 4178 SUDHL4_400M_050219_1,4180 SUDHL4_400M_050219_1,4180,QLLEMRLT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4183 19.854 89.0 746230.0 25 0 193130.0 + 12887 GVYGGSVHEA 10 72 488.2307423075439 974.4469316818878 2 488.2304870486259 MULTI CID FTMS 0 0 0 4182 517708.15625 0.6097447874900055 -2 0.02423095703125 1 Unmodified _GVYGGSVHEA_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000583938.5_1_18:72178083-72181050:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 24.020572477871973 0.4289996903560794 5 [VG]YG{M(Oxidation (M))|F} 5 6 36.198 0.0 0.0 3.7147 0.0 0.0 0.0 448.2161043756469 448.2161043756469 27.460762528683706 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [VG]YG{M(Oxidation (M))|F} 3.7147 - 53 + 1 3.07 59131.5 1.0 685 3496 4182 SUDHL4_400M_050219_1,4183 SUDHL4_400M_050219_1,4183,GVYGGSVHEA False True GVYGGSVHEA 19.853879 488.230487048626 3449564.25 4182.0 ENSG00000133313|ENST00000324262|CNDP2;;ENST00000583938.5_1_18:72178083-72181050:+|nuORF;;nc|ENSG00000133313|Q96KP4-2|CNDP2 6.179895877838135 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4184 19.863 520.0 164680.0 25 0 46096.0 + -1 RVVNGKVEY 9 92 532.2947564810337 531.2874800144336 1 532.2970458865166 MULTI CID FTMS 0 0 0 4182 102528.328125 0.6444022076069321 -3 0.0282917022705078 2 ENST00000325243.6_1_11:27828081-27828540:+|nuORF;ENSG00000122565|ENST00000396386|CBX3 5 EY 2 -1 17.474 0.0 0.0 3.289 0.0 0.0 221.17065679021732 0.0 221.17065679021732 0.0 7.095646538709879 0.0 0.0 0 0.0 0.0 0.5 0.0 EY 3.289 - 27 + 1 3.07 70579.4 1.0 686 3496 4182 SUDHL4_400M_050219_1,4184 SUDHL4_400M_050219_1,4184, False False RVVNGKVEY 19.863038 532.297045886517 1038658.5625 4182.0 ENST00000325243.6_1_11:27828081-27828540:+|nuORF;;ENSG00000122565|ENST00000396386|CBX3 5.319918711980184 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4185 19.877 800.0 247510.0 25 0 34840.0 + 29762 QPQGSFAAPAI 11 140 543.7805796919253 1085.5466064506504 2 543.7804443240166 MULTI CID FTMS 0 0 0 4182 155184.09375 0.0370291895443379 -13 0.1149158477783203 3 Unmodified _QPQGSFAAPAI_ REV__ENSG00000175727|ENST00000319080|MLXIP;REV__ENST00000541750.1_12:122618368-122620257:+|nuORF;REV__nc|ENSG00000175727|Q9HAP2-2|MLXIP;REV__nc|ENSG00000175727|Q9HAP2-4|MLXIP 66.45667989310934 0.0429411148994294 5 QPQDT[WK]A{I|L} 9 -1 + 72.932 0.0 0.0 6.7185 6.7185 91.869 0.0 0.0 0.0 36.06037787529949 16.478174818886373 16.478174818886373 9.208187539523747 0 1.1861818737241734 0.744727494896694 0.6505149978319906 0.3807196863200844 QPQDT[WK]A{I|L};QP[AG]DT[WK]A{I|L};QP{I|L}[WR][C(Carbamidomethyl (C))N]{I|L};QP{I|L}{[CT]|[{M(Oxidation (M))|F}G]}K{[QD]|[EN]|[WG]|[KD]|[RS]}GP;QP{I|L}{[CT]|[{M(Oxidation (M))|F}G]}G[KQ]DP;QPQ[{M(Oxidation (M))|F}V][KQ]DP;QP{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[KQ]DP;QP{I|L}{[WT]|[RM]}[C(Carbamidomethyl (C))K]GP 6.7185;5.8702;3.4275;3.0803;2.8655;2.8184;1.7115;1.3717 -;-;-;-;-;-;-;- 1227 + 1 3.07 151447.8 0.6399999856948853 687 3496 4182 SUDHL4_400M_050219_1,4185 SUDHL4_400M_050219_1,4185,QPQGSFAAPAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4186 19.891 800.0 121200.0 25 0 12435.0 + 31352 RMVQEAEKY 9 111 577.2874301544744 1152.5603073757486 2 577.2872192263603 MULTI CID FTMS 0 0 0 4182 91730.1015625 0.9265614910143732 -1 0.0038890838623046 4 Unmodified _RMVQEAEKY_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;nc|ENSG00000204389|P0DMV8-2|HSPA1A 41.95555342248728 0.0647214845423414 5 QEAEKY 6 3 55.355 0.0 0.0 4.8027 0.0 0.0 386.2089100568375 0.0 386.2089100568375 0.0 43.76078152608656 0.0 0.0 0 1.274227503252014 0.0 0.0 0.6861818737241735 + QEAEKY 4.8027 + + 173 1 3.07 78280.6 0.5 688 3496 4182 SUDHL4_400M_050219_1,4186 SUDHL4_400M_050219_1,4186,RMVQEAEKY True True RMVQEAEKY 19.890704 577.28721922636 407166.65625 4182.0 ENSG00000109971|ENST00000534624|HSPA8;;ENSG00000204389|ENST00000375651|HSPA1A;;nc|ENSG00000204389|P0DMV8-2|HSPA1A;;ENSG00000204388|ENST00000375650|HSPA1B 4.1848282019297285 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4188 19.898 281.0 233010.0 25 0 46386.0 + 17636 KPTAAFHLL 9 63 499.29336522974654 996.5721775262932 2 499.2932922244072 MULTI CID FTMS 0 0 0 4187 185392.828125 0.1486570656934892 32 -0.4332256317138672 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 5 KPT 3 -1 39.253 0.0 0.0 3.9388 0.0 0.0 0.0 667.3549820479059 667.3549820479059 26.77825934852436 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 KPT 3.9388 + + 40 + 1 3.07 56246.3 1.0 689 3497 4187 SUDHL4_400M_050219_1,4188 SUDHL4_400M_050219_1,4188,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4189 19.912 800.0 19936.0 25 0 6348.8 -1 0 18 1179.4622016187818 3535.364775456545 3 1179.793505847454 MULTI CID FTMS 0 0 0 4187 23875.9765625 0.2611851200308486 14 -0.2616539001464844 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.07 25662.7 0.3300000131130218 690 3497 4187 SUDHL4_400M_050219_1,4189 SUDHL4_400M_050219_1,4189, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4190 19.919 381.0 183750.0 25 0 13232.0 + 28845 QAGPATGQAY 10 111 482.2302978747441 962.4460428162882 2 482.2308837771416 MULTI CID FTMS 0 0 0 4187 115061.3671875 0.442219018511528 -3 0.0659046173095703 3 Unmodified _QAGPATGQAY_ ENSG00000167615|ENST00000326764|LENG8;nc|ENSG00000167615|Q96PV6-1|LENG8 56.17704186161178 0.0466144807663799 5 [QA][QP]TGQAY 9 2 + 37.659 0.0 0.0 3.9128 3.9128 80.333 0.0 0.0 0.0 5.590088361946435 11.082720884511804 5.590088361946435 5.590088361946435 0 0.8935078169319297 0.8538719643217619 1.274227503252014 0.6861818737241735 [QA][QP]TGQAY;[AG]A[QP]TGQAY;[QA][QP]TG[AG]AY;[AG]P[QA]TGQAY;[AG]PT[QA]GQAY;[NP]{[NV]|[RG]}TGQAY;[AG]A[QP]TG[AG]AY;[AG]PTQQQAY;[QP][QA]TGQAY;[TP]Q[QA]GQAY 3.9128;3.332;2.9561;2.9008;2.5765;2.4412;2.3798;2.3432;2.3228;2.0347 -;-;-;-;-;-;-;-;-;- 435 1 3.07 58472.4 1.0 691 3497 4187 SUDHL4_400M_050219_1,4190 SUDHL4_400M_050219_1,4190,QAGPATGQAY True True QAGPATGQAY 19.919168 482.230883777142 1488221.375 4187.0 ENSG00000167615|ENST00000326764|LENG8;;nc|ENSG00000167615|Q96PV6-1|LENG8 5.213699658711751 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4191 19.933 800.0 132120.0 25 0 36947.0 -1 0 44 1191.1426573097706 3570.406142529512 3 1191.809252917767 MULTI CID FTMS 0 0 0 4187 120343.6484375 0.0247166469267073 -13 0.1525650024414062 4 5 RYGYW 5 -1 13.02 0.0 0.0 0.36468 0.0 0.0 1828.5798008320496 1013.4668201070192 2842.046620939069 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 RYGYW 0.36468 - 45 + 1 3.07 95226.1 0.4000000059604645 692 3497 4187 SUDHL4_400M_050219_1,4191 SUDHL4_400M_050219_1,4191, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4193 19.939 116.0 590140.0 25 0 31693.0 + 30339 RAFPNKQGY 9 82 540.7829401555903 1079.5513273779804 2 540.7833129763603 MULTI CID FTMS 0 0 0 4192 455111.1875 0.6624911715959707 22 -0.3212051391601562 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 71.13359017698441 0.0206607516130725 5 KQGY 4 5 54.725 0.0 0.0 5.0692 0.0 0.0 585.3019438032895 0.0 585.3019438032895 0.0 41.96058736679344 0.0 0.0 0 1.4291746928241125 0.0 0.0 0.8494850021680094 + KQGY 5.0692 + + 115 1 3.073 56427.6 1.0 693 3498 4192 SUDHL4_400M_050219_1,4193 SUDHL4_400M_050219_1,4193,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4194 19.945 290.0 198750.0 25 0 21497.0 2571 ASHITNFE 8 99 459.7205611422663 917.4265693513324 2 459.7210265994072 MULTI CID FTMS 0 0 0 4192 128520.2890625 0.9461775641085368 -3 0.08782958984375 2 Unmodified _ASHITNFE_ ENSG00000076513|ENST00000261739|ANKRD13A 13.50788311687929 0.7113601687236069 5 ST 2 6 18.923 0.0 0.0 2.0626 0.0 0.0 711.3359606860967 0.0 711.3359606860967 0.0 4.843655823186106 0.0 0.0 0 0.0 0.0 0.5189301784845296 0.0 ST 2.0626 - 67 + 1 3.073 49990.3 1.0 694 3498 4192 SUDHL4_400M_050219_1,4194 SUDHL4_400M_050219_1,4194,ASHITNFE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4195 19.951 334.0 316020.0 25 0 45319.0 + -1 LTGWPLTMK 9 113 531.7840269505765 1061.553500967953 2 531.7844726443291 MULTI CID FTMS 0 0 0 4192 133157.265625 0.0600647800972013 -18 0.2116680145263672 3 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 39.94969957227396 0.0757326808254658 5 {NN|[MP]|[D{I|L}]|[EV]}[QT][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 48.768 0.0 0.0 4.594 4.594 79.189 0.0 0.0 0.0 2.481427974198453 1.0083376013968604 1.0083376013968604 2.481427974198453 0 1.305462187404089 1.5228787452803376 0.6382104921644451 0.0 {NN|[MP]|[D{I|L}]|[EV]}[QT][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;{NN|[MP]|[D{I|L}]|[EV]}[QT][{I|L}P]RGY;[KT]T{[TV]|[{I|L}S]}HGVGY;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}P]T{M(Oxidation (M))|F}K;[HT]VGH[RP]MK;{NN|[MP]|[D{I|L}]|[EV]}[RP][VS]T{M(Oxidation (M))|F}K;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}P]TT{[CA]|SS};{NN|[MP]|[D{I|L}]|[EV]}[QT][{I|L}P]G[YR];[{I|L}A]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}P]T{M(Oxidation (M))|F}K 4.594;4.3603;3.4388;3.0873;2.9936;2.9484;2.9468;2.5731;2.4996;2.3634 -;-;-;-;-;-;-;-;-;- 1118 1 3.073 87071.8 1.0 695 3498 4192 SUDHL4_400M_050219_1,4195 SUDHL4_400M_050219_1,4195,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4199 19.971 573.0 175700.0 25 0 31391.0 -1 0 109 467.2521943051282 466.2449178385282 1 467.2525817751884 MULTI CID FTMS 0 0 0 4198 95153.9609375 0.3448511577537769 -7 0.1339702606201172 1 5 Y 1 -1 11.783 0.0 0.0 2.5272 0.0 0.0 285.1713074643079 0.0 285.1713074643079 0.0 2.105026563703652 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5272 - 21 + 1 3.073 81859.5 1.0 696 3501 4198 SUDHL4_400M_050219_1,4199 SUDHL4_400M_050219_1,4199, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4200 19.985 800.0 85298.0 25 0 8436.1 + 12 AAAGAGPAM 9 75 716.3393685116217 715.3320920450217 1 716.3388549685478 MULTI CID FTMS 0 0 0 4198 85880.609375 0.559296573789407 3 -0.0524406433105468 2 Unmodified _AAAGAGPAM_ ENSG00000168807|ENST00000336278|SNTB2;nc|ENSG00000168807|Q13425-2|SNTB2 79.93452657146344 0.0175326119056068 5 AAAGAGPAM 9 0 + 65.908 0.0 0.0 9.2136 9.2136 92.296 0.0 0.0 0.0 0.0443219174010778 7.632192780232785 0.0443219174010778 6.478174818886373 0 1.7034021960761263 1.3010299956639813 0.0 0.0 + + AAAGAGPAM;AAQAGPAM;AAAQGPAM;AAAGQPAM;[PA]GAGAAAM;AAQQPAM;[PA]GAQAAM;[PA]GQAAAM;[PA]GAAGAAM;[PA]GAAQAM 9.2136;8.308;8.2403;7.881;7.0301;6.9849;6.9661;6.5453;6.5377;6.2991 +;-;-;-;-;-;-;-;-;- + 964 + 1 3.073 53823.3 0.4600000083446502 697 3501 4198 SUDHL4_400M_050219_1,4200 SUDHL4_400M_050219_1,4200,AAAGAGPAM True True AAAGAGPAM 19.985255 716.338854968548 725546.0 4198.0 nc|ENSG00000168807|Q13425-2|SNTB2;;ENSG00000168807|ENST00000336278|SNTB2 5.663799126942952 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4203 19.997 303.0 293140.0 25 0 47042.0 + 30346 RAFPNKQGY 9 109 360.8578392336925 1079.5516883012776 3 360.8575622439384 MULTI CID FTMS 0 0 0 4202 202988.453125 0.6515870749308578 28 -0.3502426147460937 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 42.09456458481378 0.0639583784996157 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PN[KQ]GY 9 0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F} + + 26.092 10.502 2.8064 2.417 2.417 53.291 0.0 0.0 0.0 0.0 13.618187372417346 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.7742275032520141 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PN[KQ]GY 2.417 + + 125 + 1 3.073 78806.1 1.0 698 3503 4202 SUDHL4_400M_050219_1,4203 SUDHL4_400M_050219_1,4203,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4204 20.011 800.0 30162.0 25 0 8542.9 -1 0 23 1198.4681871897817 3592.3827321695444 3 1199.138354480267 MULTI CID FTMS 0 0 0 4202 77891.953125 0.5818675423594682 -13 0.1937522888183593 2 5 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.15267 0.0 0.0 1472.5364930111448 1969.8208712213504 3442.357364232495 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.15267 - 2 + 1 3.073 32402.1 0.3199999928474426 699 3503 4202 SUDHL4_400M_050219_1,4204 SUDHL4_400M_050219_1,4204, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4207 20.02 59.0 1142800.0 25 0 369260.0 37040 TGARSPAL 8 72 386.7191417564586 0 386.7192260622978 PEAK CID FTMS 0 0 0 4206 839227.4375 0.6290480833708814 -4 0.0562877655029296 1 Unmodified _TGARSPAL_ ENST00000546571.5_1_12:109124172-109124316:-|nuORF 27.628801355627647 0.2737857431424863 5 G 1 7 10.797 0.0 0.0 1.3996 0.0 0.0 101.046912808036 610.3316701663271 711.3785829743631 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + G 1.3996 + + 12 + 1 3.073 58749.4 1.0 700 3505 4206 SUDHL4_400M_050219_1,4207 SUDHL4_400M_050219_1,4207,TGARSPAL False True TGARPSAL 20.019905 386.719226062298 6469659.0 4206.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 1.026201069355011 2.0 False 8.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4208 20.024 227.0 303090.0 25 0 24441.0 17726 KPVGFTVHAI 10 74 534.8118491736549 1067.6091454141097 2 534.8119994997978 MULTI CID FTMS 0 0 0 4206 258064.734375 0.4832191632130274 7 -0.1740550994873047 2 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 24.020572477871973 0.4289996903560794 5 KPT[KP][WQ]A{I|L} 9 6 + 40.0 0.0 0.0 3.7467 3.7467 87.108 0.0 0.0 0.0 20.491816125678284 1.5001537270751442 1.5001537270751442 40.00008819484002 0 1.2302046884880935 0.0 0.3807196863200844 0.0 KPT[KP][WQ]A{I|L} 3.7467 - 43 + 1 3.073 59196.6 1.0 701 3505 4206 SUDHL4_400M_050219_1,4208 SUDHL4_400M_050219_1,4208,KPVGFTVHAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4209 20.032 467.0 238490.0 25 0 55213.0 + 37209 TIIDKSKSV 9 105 495.7954430762717 989.5763332193436 2 495.7950622439384 MULTI CID FTMS 0 0 0 4206 168587.390625 0.1039299385998446 -6 0.0643939971923828 3 Unmodified _TIIDKSKSV_ ENSG00000112972|ENST00000325110|HMGCS1;ENST00000507004.1_1_5:43298575-43313480:-|nuORF;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 59.36838082759317 0.0264317782606298 5 T{I|L}{I|L}DKSKSV 9 0 + 97.182 0.0 0.0 9.8206 9.8206 98.143 0.0 0.0 0.0 36.938200260161125 12.587418566968154 12.587418566968154 19.739072098468213 0 0.7742275032520141 2.0 1.2887254899964358 0.0 + + T{I|L}{I|L}DKSKSV;T{I|L}{I|L}DKS[VS]K 9.8206;7.8259 +;- + 761 + 1 3.073 87842.7 1.0 702 3505 4206 SUDHL4_400M_050219_1,4209 SUDHL4_400M_050219_1,4209,TIIDKSKSV True True TIIDKSKSV 20.032451 495.795062243938 13899391.0 4206.0 ENST00000507004.1_1_5:43298575-43313480:-|nuORF;;ENSG00000112972|ENST00000325110|HMGCS1;;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 4.979145208994548 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4212 20.042 175.0 416770.0 25 0 175850.0 -1 0 74 490.28438617686106 489.2771097102611 1 490.2838928103447 MULTI CID FTMS 0 0 0 4211 296120.875 0.5257452887272892 -115 1.6497211456298828 1 5 Y 1 -1 13.979 0.0 0.0 2.8572 0.0 0.0 308.2021413038142 0.0 308.2021413038142 0.0 11.760912590556812 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.8572 - 4 + 1 3.073 65833.6 1.0 703 3507 4211 SUDHL4_400M_050219_1,4212 SUDHL4_400M_050219_1,4212, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4213 20.056 800.0 56088.0 25 0 16820.0 -1 0 39 1196.4748799036834 3586.4028103112505 3 1197.143847644329 MULTI CID FTMS 0 0 0 4211 70973.9921875 0.3877055297815575 12 -0.2141036987304687 2 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.19489 0.0 0.0 2219.7713129164645 1216.5498564670795 3436.321169383544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19489 - 7 + 1 3.073 48048.9 0.3700000047683716 704 3507 4211 SUDHL4_400M_050219_1,4213 SUDHL4_400M_050219_1,4213, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4214 20.064 452.0 162230.0 25 0 23978.0 + + 35030 SQQPGHQDF 9 99 522.2314826260236 1042.4484123188472 2 522.2317993044853 MULTI CID FTMS 0 0 0 4211 85499.546875 0.9522946908245432 -2 0.021188735961914 3 Unmodified _SQQPGQNMPG_ ENSG00000171206|ENST00000643721|TRIM8 27.628801355627647 0.3479284626772844 5 {[QS]|[NT]}Q 3 -1 27.176 0.0 0.0 2.607 0.0 0.0 0.0 696.2750779284753 696.2750779284753 15.186522119412883 0.0 0.0 0.0 0 0.5 0.8538719643217619 0.25 0.5451140161145328 {[QS]|[NT]}Q 2.607 + + 126 1 3.073 60754.0 1.0 705 3507 4211 SUDHL4_400M_050219_1,4214 SUDHL4_400M_050219_1,4214,SQQPGQNMPG False False SQQPGHQDF 20.064147 522.231799304485 817629.6875 4211.0 ENSG00000171206|ENST00000643721|TRIM8 6.230442047119141 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4215 20.078 800.0 112540.0 25 0 14666.0 + 2880 AVDYCFHYQ 9 110 573.2393347200332 1144.4641165068665 2 573.2382690310478 MULTI CID FTMS 0 0 0 4211 89945.0390625 0.7510349185656618 -3 0.0250358581542968 4 Unmodified _AVDYCFHYQ_ REV__ENSG00000060656|ENST00000373779|PTPRU;REV__ENST00000465525.6_1_1:29647190-29652170:+|nuORF;REV__nc|ENSG00000060656|Q92729-3|PTPRU;REV__nc|ENSG00000060656|Q92729-4|PTPRU;REV__nc|ENSG00000060656|Q92729|PTPRU 21.74664581756881 0.2544899275067181 5 {[VA]|[{I|L}G]}SC(Carbamidomethyl (C)){[C(Carbamidomethyl (C))E]|[WC]}S[{M(Oxidation (M))|F}V]S 10 -1 + 38.121 0.0 0.0 3.3309 3.3309 73.469 0.0 0.0 0.0 3.174100046527357 9.678024757013262 3.174100046527357 0.5237875363565792 0 0.9247425010840048 2.0 0.0 0.0 {[VA]|[{I|L}G]}SC(Carbamidomethyl (C)){[C(Carbamidomethyl (C))E]|[WC]}S[{M(Oxidation (M))|F}V]S;{[VA]|[{I|L}G]}SC(Carbamidomethyl (C)){[C(Carbamidomethyl (C))E]|[WC]}S{[VA]|[{I|L}G]}Y;{[VA]|[{I|L}G]}SC(Carbamidomethyl (C)){[C(Carbamidomethyl (C))E]|[WC]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;[QP]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))C]QY 3.3309;3.2852;2.7144;0.7583 -;-;-;- 130 1 3.073 74072.3 0.5299999713897705 706 3507 4211 SUDHL4_400M_050219_1,4215 SUDHL4_400M_050219_1,4215,AVDYCFHYQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4218 20.088 189.0 447730.0 25 0 58177.0 39468 VAPYRPDQ 8 80 473.2438184405926 944.4730839479852 2 473.2428466677666 MULTI CID FTMS 0 0 0 4217 235668.625 0.7199806233133351 -2 0.0457038879394531 1 Unmodified _VAPYRPDQ_ ENSG00000109111|ENST00000314616|SUPT6H 21.74664581756881 0.5868176546531598 5 {[VA]|[{I|L}G]}PYD 5 3 43.015 0.0 0.0 4.5544 0.0 0.0 0.0 396.2029512994751 396.2029512994751 22.936617166030207 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[VA]|[{I|L}G]}PYD 4.5544 - 64 + 1 3.073 70087.2 1.0 707 3509 4217 SUDHL4_400M_050219_1,4218 SUDHL4_400M_050219_1,4218,VAPYRPDQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4219 20.102 800.0 101910.0 25 0 26221.0 + 32395 RYSSAFTNR 9 97 551.2757689347574 1100.5369849363146 2 551.2755004763603 MULTI CID FTMS 0 0 0 4217 105445.9296875 1.0 0 0.0 2 Unmodified _RYTMSSMLL_ ENSG00000102158|ENST00000618282|MAGT1;ENST00000476168.1_1_X:77112151-77150907:-|nuORF;nc|ENSG00000102158|Q9H0U3-2|MAGT1 10.823927491677226 0.5436922275383211 5 [VG]Y{[ET]|[MV]}[RV]{[YD]|[{M(Oxidation (M))|F}M]} 9 7 + 27.736 0.0 0.0 2.5202 2.5202 75.233 0.0 0.0 0.0 3.4443065852002555 3.229459007977201 3.229459007977201 3.0102999566398125 0 0.25 1.154901959985743 0.805462187404089 0.0 [VG]Y{[ET]|[MV]}[RV]{[YD]|[{M(Oxidation (M))|F}M]};[VG]M[YV][RV]{[YD]|[{M(Oxidation (M))|F}M]} 2.5202;2.2467 -;- 72 + 1 3.073 67466.7 0.6200000047683716 708 3509 4217 SUDHL4_400M_050219_1,4219 SUDHL4_400M_050219_1,4219,RYTMSSMLL False False RYSSAFTNR 20.102013 551.27550047636 459457.34375 4217.0 ENSG00000102158|ENST00000618282|MAGT1;;ENST00000476168.1_1_X:77112151-77150907:-|nuORF;;nc|ENSG00000102158|Q9H0U3-2|MAGT1 -0.547623485326767 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4220 20.116 800.0 124820.0 25 0 42712.0 -1 0 55 568.9178895927164 0 568.9180786013603 PEAK CID FTMS 0 0 0 4217 150136.421875 0.7021138243937056 -45 0.6894569396972656 3 5 S 1 -1 7.034 0.0 0.0 0.61929 0.0 0.0 567.5330315274265 478.2326754205688 1045.765706947995 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 S 0.61929 - 4 + 1 3.073 80011.2 0.7400000095367432 709 3509 4217 SUDHL4_400M_050219_1,4220 SUDHL4_400M_050219_1,4220, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4221 20.13 800.0 40330.0 25 0 7853.3 -1 0 28 893.608867557355 3570.40636436302 4 893.8593017458916 MULTI CID FTMS 0 0 0 4217 83158.828125 1.0 0 0.0 4 5 G 1 -1 6.9897 0.0 0.0 0.19577 0.0 0.0 2147.7556256615203 1362.6033419244752 3510.358967585996 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19577 - 1 + 1 3.073 39646.7 0.4600000083446502 710 3509 4217 SUDHL4_400M_050219_1,4221 SUDHL4_400M_050219_1,4221, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4223 20.134 17.0 3004200.0 25 0 507420.0 + 29763 QPQGSFAAPAI 11 75 543.7805796919253 1085.5466064506504 2 543.7807494997978 MULTI CID FTMS 0 0 0 4222 3347077.5 0.7986615391571917 1 -0.0227317810058593 1 Unmodified _QPQGSFAAPAI_ REV__ENSG00000175727|ENST00000319080|MLXIP;REV__ENST00000541750.1_12:122618368-122620257:+|nuORF;REV__nc|ENSG00000175727|Q9HAP2-2|MLXIP;REV__nc|ENSG00000175727|Q9HAP2-4|MLXIP 24.99096001346401 0.505407273373304 5 [AG]PQDT[WK]A{I|L} 10 -1 + 64.913 0.0 0.0 5.9798 5.9798 89.229 0.0 0.0 0.0 51.20174676113472 16.53212513775344 16.53212513775344 9.164539485499256 0 0.5 1.2218487496163564 0.3252574989159953 0.3807196863200844 [AG]PQDT[WK]A{I|L};[AG]P[AG]DT[WK]A{I|L} 5.9798;5.1355 -;- 48 + 1 3.073 44184.2 1.0 711 3510 4222 SUDHL4_400M_050219_1,4223 SUDHL4_400M_050219_1,4223,QPQGSFAAPAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4224 20.139 195.0 428400.0 25 0 50975.0 + 7343 EFSRATAEK 9 106 519.764989828908 0 519.7644531130791 PEAK CID FTMS 0 0 0 4222 211366.078125 0.9368192356332103 -2 0.051675796508789 2 Unmodified _EFSRATAEK_ ENSG00000165475|ENST00000298248|CRYL1;nc|ENSG00000165475|Q9Y2S2-2|CRYL1 28.49450938151212 0.124065572374239 5 AADVHQ 6 8 38.427 0.0 0.0 3.7037 0.0 0.0 275.15088093297 138.05657373599846 413.20745466896847 0.0 0.0 0.0 0.0 0 2.3807196863200843 0.0 0.0 0.3807196863200844 AADVHQ 3.7037 - 283 + 1 3.073 71788.9 1.0 712 3510 4222 SUDHL4_400M_050219_1,4224 SUDHL4_400M_050219_1,4224,EFSRATAEK True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4225 20.152 800.0 65838.0 25 0 12930.0 -1 0 42 585.9445102313953 0 585.9443237185478 PEAK CID FTMS 0 0 0 4222 74668.5390625 0.5741950456733149 -30 0.4083232879638672 3 5 A 1 -1 0.48455 0.0 0.0 0.041419 0.0 0.0 970.7408290791984 125.0727022760375 1095.813531355236 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.041419 - 1 + 1 3.073 46451.3 0.4600000083446502 713 3510 4222 SUDHL4_400M_050219_1,4225 SUDHL4_400M_050219_1,4225, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4227 20.158 171.0 325110.0 25 0 45563.0 + 17637 KPTAAFHLL 9 71 499.29336522974654 996.5721775262932 2 499.2933837771416 MULTI CID FTMS 0 0 0 4226 197550.203125 0.1584054454572243 46 -0.4912586212158203 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 5 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3573702447874 667.3573702447874 26.197887582883936 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 29 + 1 3.073 50136.4 1.0 714 3511 4226 SUDHL4_400M_050219_1,4227 SUDHL4_400M_050219_1,4227,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4228 20.162 166.0 435160.0 25 0 214810.0 -1 0 63 488.268035256036 487.260758789436 1 488.2683593630791 MULTI CID FTMS 0 0 0 4226 332682.96875 0.5073001031197046 -61 0.9730186462402344 2 5 P 1 -1 10.181 0.0 0.0 2.0894 0.0 0.0 372.1969827047664 0.0 372.1969827047664 0.0 4.696510798231941 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.0894 - 12 + 1 3.073 65310.5 1.0 715 3511 4226 SUDHL4_400M_050219_1,4228 SUDHL4_400M_050219_1,4228, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4229 20.175 800.0 47593.0 25 0 3625.6 29959 QSQRDIFHSNA 11 74 651.8127182596121 1301.610883586024 2 651.8127929568291 MULTI CID FTMS 0 0 0 4226 84036.7265625 0.6232321950642948 -2 0.0704078674316406 3 Unmodified _QSQRDIFHSNA_ nc|ENSG808|P60509|ERVPABLB-1 17.44264345198275 0.6723198055858692 5 PSQSAN 6 8 61.375 0.0 0.0 4.7153 0.0 0.0 699.3438405983311 0.0 699.3438405983311 0.0 54.65350013324773 0.0 0.0 0 1.5 0.0 0.8494850021680094 0.0 PSQSAN 4.7153 - 49 1 3.073 33195.8 0.4600000083446502 716 3511 4226 SUDHL4_400M_050219_1,4229 SUDHL4_400M_050219_1,4229,QSQRDIFHSNA False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 4230 20.189 800.0 13562.0 25 0 1950.3 -1 0 21 903.095765721186 3608.353957018344 4 903.8463012576104 MULTI CID FTMS 0 0 0 4226 80097.0078125 1.0 0 0.0 4 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 3.073 22082.4 0.3899999856948852 717 3511 4226 SUDHL4_400M_050219_1,4230 SUDHL4_400M_050219_1,4230, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4232 20.198 377.0 146600.0 25 0 20376.0 + 1179 AHSSVSNVY 9 92 482.2302978747441 962.4460428162882 2 482.2311584353447 MULTI CID FTMS 0 0 0 4231 66044.8203125 0.2538321621780354 12 -0.1148853302001953 1 Unmodified _AHSSVSNVY_ REV__ENSG00000144355|ENST00000361725|DLX1;REV__ENST00000409492.1_1_2:172950333-172951818:+|nuORF;REV__nc|ENSG00000144355|P56177-2|DLX1 12.531546534597751 0.4974689918368763 5 AY 2 -1 19.464 0.0 0.0 2.0223 0.0 0.0 710.3344075397242 0.0 710.3344075397242 0.0 9.282889288488434 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 2.0223 - 83 + 1 3.073 46616.4 1.0 718 3512 4231 SUDHL4_400M_050219_1,4232 SUDHL4_400M_050219_1,4232,AHSSVSNVY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4233 20.205 334.0 164530.0 25 0 16274.0 + 26097 NPHWMKTL 8 78 513.7654128433254 1025.5162727534507 2 513.7665283083916 MULTI CID FTMS 0 0 0 4231 94274.1640625 0.2285033706969854 -24 0.4140758514404297 2 Unmodified _NPHWMKTL_ REV__ENSG00000099804|ENST00000215574|CDC34;REV__ENSG00000107341|ENST00000263228|UBE2R2;REV__ENST00000586788.1_1_19:531880-536341:+|nuORF 11.640296217721598 0.738950129755968 5 [DN]TKSPAPSG 10 -1 38.242 0.0 0.0 3.7291 0.0 0.0 0.0 68.05145441226796 68.05145441226796 11.559640787890544 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.0 [DN]TKSPAPSG 3.7291 - 287 + 1 3.073 46530.1 1.0 719 3512 4231 SUDHL4_400M_050219_1,4233 SUDHL4_400M_050219_1,4233,NPHWMKTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4234 20.206 52.0 1817700.0 25 0 561370.0 -1 0 38 1191.1426573097706 3570.406142529512 3 1191.476489245892 MULTI CID FTMS 0 0 0 4231 3902750.75 0.8140889881331078 2 -0.0242671966552734 3 5 YGYW 4 -1 14.412 0.0 0.0 0.40366 0.0 0.0 1984.7028477070496 1013.4678893520166 2998.170737059066 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YGYW 0.40366 - 20 + 1 3.073 85484.2 1.0 720 3512 4231 SUDHL4_400M_050219_1,4234 SUDHL4_400M_050219_1,4234, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4236 20.211 27.0 2134600.0 25 0 345330.0 + -1 LTGWPLTMK 9 61 531.7840269505765 1061.553500967953 2 531.7845336794853 MULTI CID FTMS 0 0 0 4235 2117075.5 0.9549736077848548 -3 0.0761661529541015 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 29.081581746732265 0.1611639662936252 5 T{M(Oxidation (M))|F}K 3 -1 40.049 0.0 0.0 3.7727 0.0 0.0 667.3657423390342 0.0 667.3657423390342 0.0 25.784634594678263 0.0 0.0 0 1.305462187404089 0.0 0.3807196863200844 0.0 T{M(Oxidation (M))|F}K 3.7727 + + 72 1 3.073 46790.7 1.0 721 3513 4235 SUDHL4_400M_050219_1,4236 SUDHL4_400M_050219_1,4236,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4237 20.213 138.0 519450.0 25 0 88899.0 + 30340 RAFPNKQGY 9 81 540.7829401555903 1079.5513273779804 2 540.7831298708916 MULTI CID FTMS 0 0 0 4235 348420.96875 0.5071855452812629 37 -0.402811050415039 2 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 46.020951573049366 0.0490941689151868 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY 9 0 + 48.918 0.0 0.0 4.5314 4.5314 85.621 0.0 0.0 0.0 2.2480965660138708 39.186296826175 2.2480965660138708 9.208187539523747 0 1.1549471895720984 0.0 0.0 0.8494850021680094 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]K[AG]GY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC][RV]QGY 4.5314;3.6784;2.9995 +;-;- + 63 1 3.073 60543.0 1.0 722 3513 4235 SUDHL4_400M_050219_1,4237 SUDHL4_400M_050219_1,4237,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4243 20.237 246.0 266150.0 25 0 31978.0 + 39564 VCGKGARY 8 108 427.2202670469191 0 427.2203552126884 PEAK CID FTMS 0 0 0 4242 142403.65625 0.8298644839576643 -17 0.2706165313720703 1 Unmodified _VCGKGARY_ REV__ENST00000305476.9_1_2:97525516-97525780:-|nuORF 6.354104778181461 0.5763711549229614 5 W 1 -1 6.9897 0.0 0.0 0.81998 0.0 0.0 425.18527178739447 238.14528833560783 663.3305601230023 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.81998 - 29 + 1 3.055 55073.2 1.0 723 3518 4242 SUDHL4_400M_050219_1,4243 SUDHL4_400M_050219_1,4243,VCGKGARY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4244 20.25 800.0 94895.0 25 0 7597.5 + 13806 HTDVSKTSLK 10 109 558.3074450467893 1114.6003371603786 2 558.3079101443291 MULTI CID FTMS 0 0 0 4242 84331.2578125 1.0 0 0.0 2 Unmodified _HTDVSKTSLK_ ENSG00000164128|ENST00000296533|NPY1R 24.99096001346401 0.4071966087057876 5 HTS 3 7 41.198 0.0 0.0 3.6962 0.0 0.0 0.0 786.4338472955686 786.4338472955686 13.64848121939808 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.0 HTS 3.6962 - 172 + 1 3.055 62939.4 0.5699999928474426 724 3518 4242 SUDHL4_400M_050219_1,4244 SUDHL4_400M_050219_1,4244,HTDVSKTSLK False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4247 20.271 800.0 30282.0 25 0 7651.5 -1 0 28 1198.4681871897817 3592.3827321695444 3 1199.132373034954 MULTI CID FTMS 0 0 0 4246 49775.7734375 0.3718343910652815 4 -0.0498218536376953 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 3.055 28796.4 0.3499999940395355 725 3520 4246 SUDHL4_400M_050219_1,4247 SUDHL4_400M_050219_1,4247, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4250 20.279 99.0 569850.0 25 0 129780.0 + 37210 TIIDKSKSV 9 77 495.7954430762717 989.5763332193436 2 495.7952758669853 MULTI CID FTMS 0 0 0 4249 563416.375 0.3473321998923788 11 -0.0910549163818359 1 Unmodified _TIIDKSKSV_ ENSG00000112972|ENST00000325110|HMGCS1;ENST00000507004.1_1_5:43298575-43313480:-|nuORF;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 21.59015148037692 0.2564810811560323 5 T{I|L}{I|L}DKSKSV 9 0 + 77.79 0.0 0.0 7.8609 7.8609 84.794 0.0 0.0 0.0 45.8783628755652 8.461149292312129 8.461149292312129 0.5237875363565792 0 0.4247425010840047 2.0 0.0 0.0 + + T{I|L}{I|L}DKSKSV;T{I|L}VEKSKSV 7.8609;7.808 +;- + 147 + 1 3.055 48535.1 1.0 726 3522 4249 SUDHL4_400M_050219_1,4250 SUDHL4_400M_050219_1,4250,TIIDKSKSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4251 20.286 378.0 117290.0 25 0 10641.0 + 12045 GQDPHSSQAF 10 81 537.2360737875359 1072.4575946418718 2 537.2361938357353 MULTI CID FTMS 0 0 0 4249 150120.5 0.7565330691162653 -7 0.0571956634521484 2 Unmodified _GQDPHSSQAF_ ENSG00000160949|ENST00000409379|TONSL;ENST00000497613.2_1_8:145658938-145666334:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL 42.312485326615175 0.1331477410672653 5 [AG]G[WY]{[CA]|SS}QA{M(Oxidation (M))|F} 10 4 + 40.251 0.0 0.0 3.7531 3.7531 81.301 0.0 0.0 0.0 4.052878778108209 17.714847577223054 4.052878778108209 7.596594672570582 0 1.0 1.3010299956639813 0.3807196863200844 0.0 [AG]G[WY]{[CA]|SS}QA{M(Oxidation (M))|F};{[QG]|[NA]}[WY]{[CA]|SS}QA{M(Oxidation (M))|F};[HS][Y{M(Oxidation (M))|F}]{[CA]|SS}QA{M(Oxidation (M))|F} 3.7531;3.0448;2.1575 -;-;- 60 1 3.055 39295.8 1.0 727 3522 4249 SUDHL4_400M_050219_1,4251 SUDHL4_400M_050219_1,4251,GQDPHSSQAF False True GQDPHSSQAF 20.286225 537.236193835735 962318.75 4249.0 ENSG00000160949|ENST00000409379|TONSL;;ENST00000497613.2_1_8:145658938-145666334:-|nuORF;;nc|ENSG00000160949|Q96HA7-2|TONSL 5.836442788441976 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4252 20.3 800.0 165600.0 25 0 27225.0 + -1 LDTSAKAT 8 145 424.7222203984176 847.4298878636351 2 424.7216369509697 MULTI CID FTMS 0 0 0 4249 105221.8671875 0.4079320812600378 -12 0.1449508666992187 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LDTSAKAT_ REV__ENSG00000145012|ENST00000617246|LPP 14.838274106304384 0.6917062315640577 5 DTTQTK 6 -1 43.93 0.0 0.0 5.1839 0.0 0.0 155.0960037202446 0.0 155.0960037202446 0.0 32.147293108810075 0.0 0.0 0 0.7302046884880937 0.0 1.263632853717045 0.43986268792935 DTTQTK 5.1839 - 188 + 1 3.055 104313.4 0.5099999904632568 728 3522 4249 SUDHL4_400M_050219_1,4252 SUDHL4_400M_050219_1,4252,LDTSAKAT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4261 20.34 511.0 193500.0 25 0 32655.0 + 42094 VREHIRFS 8 99 522.292812846684 1042.571072760168 2 522.2942993044853 MULTI CID FTMS 0 0 0 4260 77316.9296875 0.6714407284307444 -1 0.0040187835693359 1 Unmodified _VREHIRFS_ REV__ENSG00000242852|ENST00000397732|ZNF709 7.910154910731844 0.7763180056447161 5 P 1 -1 11.109 0.0 0.0 1.0656 0.0 0.0 927.5072661579204 0.0 927.5072661579204 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.0656 - 68 + 1 3.055 80721.5 1.0 729 3530 4260 SUDHL4_400M_050219_1,4261 SUDHL4_400M_050219_1,4261,VREHIRFS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4264 20.354 447.0 204790.0 25 0 23263.0 -1 0 111 467.2521943051282 466.2449178385282 1 467.2509643435478 MULTI CID FTMS 0 0 0 4263 75623.7890625 0.2740711049228941 24 -0.2960395812988281 1 5 [{I|L}A]TY 4 -1 + 25.489 0.0 0.0 5.4669 5.4669 86.844 0.0 0.0 0.0 1.658577076816119 5.311894545657196 1.658577076816119 8.322194502297009 0 0.7742275032520141 0.6989700043360187 0.0 0.0 [{I|L}A]TY;[YT]A{I|L};[TA]{I|L}Y;[TA]Y{I|L} 5.4669;3.682;2.0977;1.8694 -;-;-;- 58 1 3.055 77097.3 1.0 730 3532 4263 SUDHL4_400M_050219_1,4264 SUDHL4_400M_050219_1,4264, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4265 20.366 668.0 256100.0 25 0 64207.0 + 30347 RAFPNKQGY 9 144 360.8578392336925 1079.5516883012776 3 360.8575927615166 MULTI CID FTMS 0 0 0 4263 113759.1953125 0.3651637331041414 57 -0.7739791870117188 2 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 48.345845343767074 0.0439967357579942 5 PN 2 7 27.519 0.0 0.0 2.5491 0.0 0.0 374.2056593658005 491.2266024225219 865.4322617883224 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.805462187404089 + PN 2.5491 + + 134 + 1 3.055 144457.3 1.0 731 3532 4263 SUDHL4_400M_050219_1,4265 SUDHL4_400M_050219_1,4265,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4269 20.381 257.0 321670.0 25 0 170970.0 -1 0 66 508.2942836777695 507.2870072111695 1 508.2944213747978 MULTI CID FTMS 0 0 0 -1 0 1 5 A[W{M(Oxidation (M))|F}] 3 -1 2.6761 0.0 0.0 0.52752 0.0 0.0 85.08982283759921 0.0 85.08982283759921 0.0 0.2018122933698425 0.0 0.0 0 0.0 0.0 0.0 0.0 A[W{M(Oxidation (M))|F}] 0.52752 - 10 1 3.055 69813.5 1.0 732 3535 4268 SUDHL4_400M_050219_1,4269 SUDHL4_400M_050219_1,4269, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4270 20.395 800.0 81504.0 25 0 17261.0 + 19113 LDTNADKQLS 10 90 552.7804707120277 1103.5463884908554 2 552.7802612185478 MULTI CID FTMS 0 0 0 4268 81686.328125 0.4933303665144284 -3 0.0301723480224609 2 Unmodified _LDTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 31.44599026986405 0.2621622316416526 5 {NN|[MP]|[D{I|L}]|[EV]}TNADKQ{I|L}S 10 0 + 60.588 0.0 0.0 5.4903 5.4903 82.973 0.0 0.0 0.0 6.736636163433062 6.736636163433062 6.736636163433062 3.253800256993955 0 1.9731975075880328 1.6989700043360187 0.4247425010840047 0.4247425010840047 + + {NN|[MP]|[D{I|L}]|[EV]}TNADKQ{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TNWKQ{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TR[DG]D{I|L}{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TR[DG]{I|L}D{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TGGADKQ{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TGGWKQ{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TRT[NG]Q{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TR{[RE]|[WV]}D{I|L}S;{NN|[MP]|[D{I|L}]|[EV]}TRT[PS]D{I|L}S;{[TV]|[{I|L}S]}ER[DG]D{I|L}{I|L}S 5.4903;5.1954;4.8798;4.7666;4.6598;4.361;4.0176;3.858;3.7448;3.7141 +;-;-;-;-;-;-;-;-;- + 676 + 1 3.055 53053.7 0.5600000023841858 733 3535 4268 SUDHL4_400M_050219_1,4270 SUDHL4_400M_050219_1,4270,LDTNADKQLS False True LDTNADKQLS 20.394884 552.780261218548 661144.3125 4268.0 ENSG00000163220|ENST00000368738|S100A9 5.763350168863933 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4271 20.409 800.0 119020.0 25 0 4970.5 + 31553 RQLEQTNY 8 163 526.2634553624513 1050.5123577917025 2 526.2654296755791 MULTI CID FTMS 0 0 0 4268 92220.125 1.0 0 0.0 3 Unmodified _RQLEQTNY_ ENSG00000172936|ENST00000650905|MYD88;ENST00000416282.2_1_3:38180152-38182096:+|nuORF;ENST00000481122.5_1_3:38180729-38182774:+|nuORF;ENST00000484513.1_1_3:38181817-38182096:+|nuORF;nc|ENSG00000172936|Q99836-2|MYD88;nc|ENSG00000172936|Q99836-5|MYD88;nc|ENSG00000172936|Q99836-6|MYD88 29.081581746732265 0.4323690340403521 5 EQTNY 5 3 39.909 0.0 0.0 3.799 0.0 0.0 397.2438930922944 0.0 397.2438930922944 0.0 25.91129063296272 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 + EQTNY 3.799 + + 1024 1 3.055 77170.7 0.5099999904632568 734 3535 4268 SUDHL4_400M_050219_1,4271 SUDHL4_400M_050219_1,4271,RQLEQTNY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4273 20.417 232.0 252700.0 25 0 31353.0 + 29764 QPQGSFAAPAI 11 80 543.7805796919253 1085.5466064506504 2 543.7806274294853 MULTI CID FTMS 0 0 0 4272 265122.8125 0.0632621722971558 27 -0.2721214294433594 1 Unmodified _QPQGSFAAPAI_ REV__ENSG00000175727|ENST00000319080|MLXIP;REV__ENST00000541750.1_12:122618368-122620257:+|nuORF;REV__nc|ENSG00000175727|Q9HAP2-2|MLXIP;REV__nc|ENSG00000175727|Q9HAP2-4|MLXIP 32.78568957990786 0.3235288296534633 5 [QP]QD 4 -1 25.688 0.0 0.0 2.3663 0.0 0.0 0.0 614.3266695611936 614.3266695611936 4.217042969019289 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.3252574989159953 0.3494850021680094 [QP]QD 2.3663 - 77 + 1 3.055 49299.5 1.0 735 3536 4272 SUDHL4_400M_050219_1,4273 SUDHL4_400M_050219_1,4273,QPQGSFAAPAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4274 20.419 107.0 631310.0 25 0 60464.0 4 AAAAPLGAR 9 76 399.23510046073926 796.4556479882785 2 399.2351257205009 MULTI CID FTMS 0 0 0 4272 511325.53125 0.4229293789522289 -11 0.1007003784179687 2 Unmodified _AAAAPLGAR_ ENST00000426838.8_1_18:42260239-42281192:+|nuORF;REV__ENST00000345057.8_1_16:67188417-67189138:-|nuORF 36.04419817259434 0.0971720506436186 5 AAAAD 5 5 54.877 0.0 0.0 6.8902 0.0 0.0 0.0 394.26150060962544 394.26150060962544 40.95496798766607 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.3054621874040891 0.0 AAAAD 6.8902 - 56 1 3.055 55610.4 1.0 736 3536 4272 SUDHL4_400M_050219_1,4274 SUDHL4_400M_050219_1,4274,AAAAPLGAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4275 20.433 800.0 179560.0 25 0 53192.0 -1 0 81 568.9178895927164 0 568.9178344607353 PEAK CID FTMS 0 0 0 4272 174037.71875 0.8138883741485107 -18 0.1793289184570312 3 5 M 1 -1 5.4846 0.0 0.0 0.48287 0.0 0.0 821.7196254833583 180.04351221256096 1001.7631376959192 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.48287 - 34 + 1 3.055 112914.0 0.6800000071525574 737 3536 4272 SUDHL4_400M_050219_1,4275 SUDHL4_400M_050219_1,4275, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4277 20.442 329.0 202820.0 25 0 34887.0 + 3065 AVLQSNIRP 9 68 499.29336522974654 996.5721775262932 2 499.2933837771416 MULTI CID FTMS 0 0 0 4276 127448.40625 0.102194385252392 72 -0.9465179443359376 1 Unmodified _AVLQSNIRP_ REV__ENSG00000163602|ENST00000477973|RYBP;REV__nc|ENSG00000163602|Q8N488|RYBP 11.640296217721598 0.521594087909532 5 KPT 3 -1 35.445 0.0 0.0 3.5567 0.0 0.0 0.0 667.3511446588499 667.3511446588499 20.964467979859336 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 KPT 3.5567 - 83 + 1 3.055 56817.8 1.0 738 3537 4276 SUDHL4_400M_050219_1,4277 SUDHL4_400M_050219_1,4277,AVLQSNIRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4278 20.453 631.0 124890.0 25 0 22153.0 7654 EKHYLFYD 8 70 557.7653711562294 1113.5161893792588 2 557.7661620974541 MULTI CID FTMS 0 0 0 4276 83216.4453125 0.6411173832248664 -10 0.1170597076416015 2 Unmodified _EKHYLFYD_ ENSG00000122958|ENST00000263559|VPS26A;ENST00000467852.1_1_10:70884027-70917811:+|nuORF;nc|ENSG00000122958|O75436-2|VPS26A 7.910154910731844 0.7763180056447161 5 YT{M(Oxidation (M))|F}K 4 6 26.356 0.0 0.0 2.3669 0.0 0.0 556.2516762950776 0.0 556.2516762950776 0.0 11.139184843260132 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.1803115997617927 YT{M(Oxidation (M))|F}K 2.3669 - 40 + 1 3.055 64351.1 1.0 739 3537 4276 SUDHL4_400M_050219_1,4278 SUDHL4_400M_050219_1,4278,EKHYLFYD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4280 20.458 118.0 387750.0 25 0 36607.0 + 40055 VGGNAFTFTI 10 78 513.7654128433254 1025.5162727534507 2 513.7654907107353 MULTI CID FTMS 0 0 0 4279 319809.875 0.7751607786332002 2 -0.0481777191162109 1 Unmodified _VGGNAFTFTI_ REV__ENSG00000169299|ENST00000381967|PGM2 13.90604991867851 0.6142120002215601 5 EPW 3 -1 23.188 0.0 0.0 2.2611 0.0 0.0 0.0 610.3189180963499 610.3189180963499 1.4220428854660838 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EPW 2.2611 - 108 + 1 3.055 41685.1 1.0 740 3538 4279 SUDHL4_400M_050219_1,4280 SUDHL4_400M_050219_1,4280,VGGNAFTFTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4281 20.467 517.0 204040.0 25 0 19269.0 + 31888 RTLTPISGGQR 11 107 395.8944448450878 1184.6615051354634 3 395.8945495486259 MULTI CID FTMS 0 0 0 4279 120414.8125 0.652376301749905 -1 0.0195236206054687 2 Unmodified _RTLTPISGGQR_ ENSG00000085840|ENST00000371568|ORC1 22.48609341952514 0.5642223135719058 5 P{I|L}SG{[QG]|[NA]}R 7 4 25.41 0.0 0.0 2.145 0.0 0.0 471.2792552348759 0.0 471.2792552348759 0.0 12.936208967586662 0.0 0.0 0 0.9247425010840048 0.0 0.2887254899964357 0.3054621874040891 + P{I|L}SG{[QG]|[NA]}R 2.145 + + 67 + 1 3.055 93855.6 1.0 741 3538 4279 SUDHL4_400M_050219_1,4281 SUDHL4_400M_050219_1,4281,RTLTPISGGQR False True RTLTPISGGQR 20.466919 395.894549548626 762314.8125 4279.0 ENSG00000085840|ENST00000371568|ORC1 6.95048983891805 3.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4283 20.472 46.0 1260700.0 25 0 159300.0 + -1 LTGWPLTMK 9 79 531.7840269505765 1061.553500967953 2 531.7843505740166 MULTI CID FTMS 0 0 0 4282 1119533.5 0.5050008587464196 23 -0.2091865539550781 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 32.78568957990786 0.1150597335874693 5 K[HQ][{I|L}P]T{M(Oxidation (M))|F}K 8 -1 42.898 0.0 0.0 4.041 0.0 0.0 63.997704563081534 0.0 63.997704563081534 0.0 32.94917177197476 0.0 0.0 0 1.924742501084005 0.0 0.805462187404089 0.2742275032520141 K[HQ][{I|L}P]T{M(Oxidation (M))|F}K 4.041 - 181 + 1 3.055 52288.6 1.0 742 3539 4282 SUDHL4_400M_050219_1,4283 SUDHL4_400M_050219_1,4283,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4284 20.475 187.0 300710.0 25 0 14713.0 + 30341 RAFPNKQGY 9 88 540.7829401555903 1079.5513273779804 2 540.7829467654228 MULTI CID FTMS 0 0 0 4282 255047.796875 0.3712651290618733 63 -0.856353759765625 2 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 64.23631603340823 0.0237365939569086 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY 9 0 + 38.272 0.0 0.0 3.5452 3.5452 83.597 0.0 0.0 0.0 2.147642715192511 21.28273058364145 2.147642715192511 9.208187539523756 0 1.363364334130467 0.0 0.0 0.8494850021680094 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]K[AG]GY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]VRQGY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]V[VG]QGY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]VR[AG]GY 3.5452;2.6923;2.0298;1.1768;1.1768 +;-;-;-;- + 187 1 3.055 48247.8 1.0 743 3539 4282 SUDHL4_400M_050219_1,4284 SUDHL4_400M_050219_1,4284,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4285 20.489 800.0 187200.0 25 0 14813.0 16511 KANKHIDQ 8 116 477.2618239203188 952.5090949074377 2 477.2610046267509 MULTI CID FTMS 0 0 0 4282 131419.9375 0.9240671684015568 -6 0.1012248992919921 3 Unmodified _KANKHIDQ_ ENSG00000138472|ENST00000261047|GUCA1C;nc|ENSG00000138472|O95843-2|GUCA1C 36.12702656103203 0.299085846329477 5 HT{I|L}DGA 6 7 47.357 0.0 0.0 4.9718 0.0 0.0 340.22163588691564 0.0 340.22163588691564 0.0 34.5435462902331 0.0 0.0 0 1.0356668758921828 0.0 0.0 0.0 HT{I|L}DGA 4.9718 - 153 1 3.055 120046.2 0.5299999713897705 744 3539 4282 SUDHL4_400M_050219_1,4285 SUDHL4_400M_050219_1,4285,KANKHIDQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4286 20.501 673.0 240810.0 25 0 57846.0 -1 0 57 1191.1426573097706 3570.406142529512 3 1191.475634753704 MULTI CID FTMS 0 0 0 4282 593415.0 0.1237825953637977 29 -0.2562980651855469 4 5 {M(Oxidation (M))|F}C(Carbamidomethyl (C)) 2 -1 9.464 0.0 0.0 0.26507 0.0 0.0 1311.4512607929871 1948.7907198541627 3260.24198064715 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}C(Carbamidomethyl (C)) 0.26507 - 46 + 1 3.055 134230.9 1.0 745 3539 4282 SUDHL4_400M_050219_1,4286 SUDHL4_400M_050219_1,4286, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4288 20.507 192.0 275450.0 25 0 25176.0 + 1907 AMAASPHAV 9 75 427.7126530988659 853.4107532645319 2 427.7130004763603 MULTI CID FTMS 0 0 0 4287 162548.9375 0.7029222559470772 5 -0.025634765625 1 Unmodified _AMAASPHAV_ ENSG00000177733|ENST00000314940|HNRNPA0 19.438996006549623 0.310492472477042 5 {[DS]|[MA]|[CV]|TT}A 3 6 23.416 0.0 0.0 2.7439 0.0 0.0 0.0 577.2728497823631 577.2728497823631 16.84955642535897 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {[DS]|[MA]|[CV]|TT}A 2.7439 + + 22 1 3.055 51042.8 1.0 746 3540 4287 SUDHL4_400M_050219_1,4288 SUDHL4_400M_050219_1,4288,AMAASPHAV False True AMAASPHAV 20.507106 427.71300047636 2465271.0 4287.0 ENSG00000177733|ENST00000314940|HNRNPA0 1.2002971172332764 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4289 20.509 102.0 426820.0 25 0 59080.0 + 17549 KPPDARQLT 9 68 513.2907364689861 1024.566920004772 2 513.2903320193291 MULTI CID FTMS 0 0 0 4287 326459.3125 0.473557055279355 -12 0.1807403564453125 2 Unmodified _KPPDARQLT_ REV__ENSG00000204642|ENST00000259951|HLA-F;REV__ENST00000484704.5_1_6:29691969-29693843:+|nuORF;REV__nc|ENSG00000204642|P30511|HLA-F;REV__nc|ENSG00000206341|P01893|HLA-H 19.256988751693697 0.3154191944385105 5 KPTW 4 -1 48.488 0.0 0.0 4.7325 0.0 0.0 0.0 509.2835201078884 509.2835201078884 35.75257498915995 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.4247425010840047 0.0 KPTW 4.7325 - 146 + 1 3.055 41018.9 1.0 747 3540 4287 SUDHL4_400M_050219_1,4289 SUDHL4_400M_050219_1,4289,KPPDARQLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4292 20.519 133.0 625900.0 25 0 173480.0 + 33 AAAPPAKEI 9 80 434.25045496566753 866.4863569981351 2 434.2503539919853 MULTI CID FTMS 0 0 0 4291 309064.78125 0.5165449321832172 -13 0.1893672943115234 1 Unmodified _AAAPPAKEI_ ENSG00000166851|ENST00000300093|PLK1 13.90604991867851 0.4602628045680013 5 AAA 3 6 24.041 0.0 0.0 2.7745 0.0 0.0 0.0 650.3521156253413 650.3521156253413 -0.6516688424750328 0.0 -0.6516688424750328 0.0 0 0.5 1.3979400086720375 0.0 0.0 + AAA 2.7745 + + 38 1 3.055 70756.0 1.0 748 3542 4291 SUDHL4_400M_050219_1,4292 SUDHL4_400M_050219_1,4292,AAAPPAKEI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4297 20.547 800.0 95835.0 25 0 12939.0 + 37715 TLQDSRTNTAY 11 101 635.3071449753502 1268.5997370175005 2 635.3075439333916 MULTI CID FTMS 0 0 0 4296 85755.546875 0.4842281357522705 -7 0.0636482238769531 1 Unmodified _TLQDSRTNTAY_ ENSG00000115762|ENST00000693505|PLEKHB2;nc|ENSG00000115762|Q96CS7-2|PLEKHB2;nc|ENSG00000115762|Q96CS7-3|PLEKHB2;nc|ENSG00000115762|Q96CS7-5|PLEKHB2;nc|ENSG00000115762|Q96CS7-6|PLEKHB2 49.74193281347159 0.1190592179673825 5 [{I|L}T]Q[C(Carbamidomethyl (C))K]DG{I|L}TAY 11 5 + 56.653 0.0 0.0 4.4658 4.4658 75.695 0.0 0.0 0.0 0.1329657522032548 0.1329657522032548 0.1329657522032548 0.1329657522032548 0 1.424742501084005 2.0 0.805462187404089 0.3494850021680094 [{I|L}T]Q[C(Carbamidomethyl (C))K]DG{I|L}TAY;[{I|L}T]QAAQ[YT][NP]Y;[{I|L}T]QAC(Carbamidomethyl (C))[TA]G{I|L}TAY;[{I|L}T]QAC(Carbamidomethyl (C))[QT]{I|L}TAY;[{I|L}T]QAA[NP]D[TP]NQ;[{I|L}T][AG][C(Carbamidomethyl (C))K]DG{I|L}TAY;[{I|L}T]QAAQ[YT]K[MD];[{I|L}T]Q[C(Carbamidomethyl (C))K]DGA[{I|L}T]Y;[{I|L}T]QAAYY[TP]NQ;[{I|L}T]QAC(Carbamidomethyl (C))[WR]TAY 4.4658;4.4553;4.4369;4.2919;3.7774;3.7462;3.7444;3.7413;3.6323;3.4352 -;-;-;-;-;-;-;-;-;- 1447 1 3.055 61002.6 0.550000011920929 749 3546 4296 SUDHL4_400M_050219_1,4297 SUDHL4_400M_050219_1,4297,TLQDSRTNTAY True True TLQDSRTNTAY 20.546948 635.307543933392 783625.8125 4296.0 nc|ENSG00000115762|Q96CS7-5|PLEKHB2;;nc|ENSG00000115762|Q96CS7-2|PLEKHB2;;nc|ENSG00000115762|Q96CS7-3|PLEKHB2;;nc|ENSG00000115762|Q96CS7-6|PLEKHB2;;ENSG00000115762|ENST00000693505|PLEKHB2 6.897850672403972 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4298 20.553 336.0 314430.0 25 0 47746.0 + 18386 KVRDLEVK 8 113 493.8032712035297 985.5919894738596 2 493.8033019900322 MULTI CID FTMS 0 0 0 4296 168438.171875 0.2269396738649903 -20 0.2184734344482422 2 Unmodified _KVRDLEVK_ REV__ENSG00000155363|ENST00000369645|MOV10;REV__ENST00000468624.5_1_1:113217534-113241292:+|nuORF;REV__ENST00000496577.5_1_1:113231344-113241292:+|nuORF;REV__nc|ENSG00000155363|Q9HCE1-2|MOV10 24.020572477871973 0.5389365498350341 5 {[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}[{I|L}P]TVK 9 -1 + 50.625 0.0 0.0 5.1365 5.1365 89.036 0.0 0.0 0.0 0.2263369171353701 24.65104959757973 0.2263369171353701 12.218487496163554 0 1.8807196863200843 1.6989700043360187 0.4247425010840047 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}[{I|L}P]TVK;[KA]{[ET]|[MV]}[{I|L}P]TVK;[KA]W{I|L}{I|L}EVK;[KA]W{I|L}{I|L}TV[VG] 5.1365;3.8968;3.2054;0.79408 -;-;-;- 256 1 3.055 84423.5 1.0 750 3546 4296 SUDHL4_400M_050219_1,4298 SUDHL4_400M_050219_1,4298,KVRDLEVK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4300 20.57 779.0 136140.0 25 0 15861.0 -1 LGTGATVTS 9 135 424.7222203984176 847.4298878636351 2 424.7217285037041 MULTI CID FTMS 0 0 0 4299 56896.01953125 0.2205787854100332 13 -0.1027755737304687 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LGTGATVTS_ ENST00000539374.1_1_12:10464095-10467389:+|nuORF;ENST00000543420.5_1_12:10464095-10467389:+|nuORF 12.531546534597751 0.4974689918368763 5 DTA{[SA]|[TG]}TK 7 -1 25.0 0.0 0.0 2.9502 0.0 0.0 155.09445192789138 0.0 155.09445192789138 0.0 11.901533209122768 0.0 0.0 0 0.7059771852360797 0.0 0.4247425010840047 0.3072869970894639 DTA{[SA]|[TG]}TK 2.9502 - 90 + 1 3.059 85405.1 1.0 751 3547 4299 SUDHL4_400M_050219_1,4300 SUDHL4_400M_050219_1,4300,LGTGATVTS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4301 20.573 123.0 738950.0 25 0 93384.0 42689 VTWEVLEGEV 10 86 387.5315850327332 1159.5729256983998 3 387.5315124392509 MULTI CID FTMS 0 0 0 4299 268975.0625 0.275449908559945 -17 0.2250385284423828 2 Unmodified _VTWEVLEGEV_ ENSG00000138385|ENST00000260956|SSB;ENST00000438469.2_1_1:146553889-146554591:-|nuORF 22.736283301280096 0.4578556481593033 5 VTWVE 5 5 43.672 0.0 0.0 3.7662 0.0 0.0 0.0 542.2475069635374 542.2475069635374 28.187587626244124 0.0 0.0 0.0 0 0.242992819099939 1.0969100130080565 0.805462187404089 0.0 VTWVE 3.7662 - 83 + 1 3.059 80811.3 1.0 752 3547 4299 SUDHL4_400M_050219_1,4301 SUDHL4_400M_050219_1,4301,VTWEVLEGEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4302 20.587 800.0 176790.0 25 0 56569.0 + 38996 TVREEGAGRW 10 88 580.79416681661 1159.5737807000198 2 580.7939941287041 MULTI CID FTMS 0 0 0 4299 115394.421875 0.2765519728347648 -15 0.2094688415527343 3 Unmodified _TVREEGAGRW_ REV__ENST00000529313.5_1_11:17298611-17304373:+|nuORF 27.22323531849824 0.3570408936368626 5 {[TV]|[{I|L}S]}EREQRGW 9 -1 + 73.584 0.0 0.0 6.3458 6.3458 90.795 0.0 0.0 0.0 18.222032945537435 50.41808923764867 18.222032945537435 9.208187539523747 0 2.274227503252014 1.6989700043360187 0.2887254899964357 0.6861818737241735 {[TV]|[{I|L}S]}EREQRGW;{[TV]|[{I|L}S]}ERE[AG]RGW;{[TV]|[{I|L}S]}EA[WR]RG{[DA]|[EG]};[QP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}RG[VS] 6.3458;5.5517;3.675;1.2647 -;-;-;- 196 1 3.059 113027.3 0.5600000023841858 753 3547 4299 SUDHL4_400M_050219_1,4302 SUDHL4_400M_050219_1,4302,TVREEGAGRW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4303 20.601 800.0 73587.0 25 0 15866.0 -1 0 35 585.9445102313953 0 585.9446899294853 PEAK CID FTMS 0 0 0 4299 94340.1171875 0.7254678955478251 7 -0.0784587860107421 4 5 M 1 -1 5.4846 0.0 0.0 0.46882 0.0 0.0 855.7728250515155 180.04383264713127 1035.8166576986468 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.46882 - 2 + 1 3.059 52405.2 0.5099999904632568 754 3547 4299 SUDHL4_400M_050219_1,4303 SUDHL4_400M_050219_1,4303, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4308 20.624 478.0 170580.0 25 0 11674.0 + 31822 RTAQEVETY 9 104 548.7675488315891 1095.5205447299782 2 548.7670165896416 MULTI CID FTMS 0 0 0 4307 92238.1953125 0.6449725906196484 -14 0.1793498992919922 1 Unmodified _RTAQEVETY_ ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5 28.49450938151212 0.1686335738423394 5 ETH[HK]TY 7 6 42.255 0.0 0.0 3.8571 0.0 0.0 181.08433975126565 0.0 181.08433975126565 0.0 24.58514035582464 0.0 0.0 0 0.5 0.0 1.1549471895720984 0.0 ETH[HK]TY 3.8571 - 362 + 1 3.059 70579.1 1.0 755 3551 4307 SUDHL4_400M_050219_1,4308 SUDHL4_400M_050219_1,4308,RTAQEVETY False True RTAQEVETY 20.623549 548.767016589642 710946.5 4307.0 ENST00000581230.5_1_17:62498125-62502378:-|nuORF;;ENSG00000108654|ENST00000225792|DDX5;;nc|ENSG00000108654|P17844-2|DDX5 5.2803263664245605 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4319 20.676 800.0 33035.0 25 0 8399.6 -1 0 30 1058.419252071203 3172.235926813808 3 1058.754077136517 MULTI CID FTMS 0 0 0 4318 20371.8515625 0.2447128965233761 1 -0.0164051055908203 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 3.059 34635.4 0.3799999952316284 756 3561 4318 SUDHL4_400M_050219_1,4319 SUDHL4_400M_050219_1,4319, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4321 20.681 98.0 515350.0 25 0 49912.0 5 AAAAPLGAR 9 66 399.23510046073926 796.4556479882785 2 399.2351257205009 MULTI CID FTMS 0 0 0 4320 391536.6875 0.3238492075226058 15 -0.261383056640625 1 Unmodified _AAAAPLGAR_ ENST00000426838.8_1_18:42260239-42281192:+|nuORF;REV__ENST00000345057.8_1_16:67188417-67189138:-|nuORF 36.04419817259434 0.0971720506436186 5 AAAAD 5 5 52.703 0.0 0.0 6.6172 0.0 0.0 0.0 394.26137853931294 394.26137853931294 31.787887749990343 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.0 0.0 AAAAD 6.6172 - 56 1 3.059 46606.8 1.0 757 3562 4320 SUDHL4_400M_050219_1,4321 SUDHL4_400M_050219_1,4321,AAAAPLGAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4324 20.69 52.0 1084300.0 25 0 138060.0 + 17710 KPTPPKRSS 9 55 499.2933038868565 996.572054840513 2 499.2931701540947 MULTI CID FTMS 0 0 0 4323 1142910.625 0.5032383365505532 -5 0.0331554412841796 1 Unmodified _KPTPPKRSS_ ENSG00000188158|ENST00000676302|NHS;nc|ENSG00000188158|Q6T4R5-2|NHS;nc|ENSG00000188158|Q6T4R5-3|NHS;nc|ENSG00000188158|Q6T4R5-4|NHS 16.149105407346934 0.3995459350917656 5 KPT 3 6 44.693 0.0 0.0 4.4846 0.0 0.0 0.0 667.3534065360084 667.3534065360084 28.037275116073346 0.0 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 + KPT 4.4846 + + 46 + 1 3.059 47536.3 1.0 758 3564 4323 SUDHL4_400M_050219_1,4324 SUDHL4_400M_050219_1,4324,KPTPPKRSS False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4327 20.71 800.0 113200.0 25 0 17029.0 7655 EKHYLFYD 8 99 557.7653711562294 1113.5161893792588 2 557.7645751833916 MULTI CID FTMS 0 0 0 4326 80953.9765625 0.6236868376256043 19 -0.3781108856201172 1 Unmodified _EKHYLFYD_ ENSG00000122958|ENST00000263559|VPS26A;ENST00000467852.1_1_10:70884027-70917811:+|nuORF;nc|ENSG00000122958|O75436-2|VPS26A 7.910154910731844 0.7763180056447161 5 YT{M(Oxidation (M))|F}K 4 6 27.841 0.0 0.0 2.5003 0.0 0.0 556.2521035411713 0.0 556.2521035411713 0.0 11.913871528851168 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.2134679910804404 YT{M(Oxidation (M))|F}K 2.5003 - 170 + 1 3.059 75668.0 0.5600000023841858 759 3566 4326 SUDHL4_400M_050219_1,4327 SUDHL4_400M_050219_1,4327,EKHYLFYD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4328 20.719 513.0 143750.0 25 0 35249.0 + 25669 NGGGIGSSNRI 11 82 516.2628037133846 0 516.2636596560478 PEAK CID FTMS 0 0 0 4326 97087.65625 0.8768902340839866 -1 0.0040264129638671 2 Unmodified _NGGGIGSSNRI_ ENSG00000171365|ENST00000376091|CLCN5 10.898955630103616 0.4419610990971019 5 {I|L}G 2 9 17.078 0.0 0.0 1.6573 0.0 0.0 632.319295315638 225.06305872135 857.382354036988 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 + {I|L}G 1.6573 + + 26 + 1 3.059 61744.0 1.0 760 3566 4326 SUDHL4_400M_050219_1,4328 SUDHL4_400M_050219_1,4328,NGGGIGSSNRI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4331 20.74 800.0 183130.0 25 0 24769.0 + 17450 KNQTQSSRK 9 128 538.7920590499077 1075.5695651666151 2 538.7919799685478 MULTI CID FTMS 0 0 0 4330 156577.390625 0.3347950994935119 -9 0.0714282989501953 1 Unmodified _KNQTQSSRK_ REV__ENSG00000119335|ENST00000322030|SET;REV__ENSG00000230667|ENST00000596516|SETSIP;REV__ENST00000497538.1_1_3:155705188-155705881:+|nuORF;REV__nc|ENSG00000119335|Q01105-3|SET;REV__nc|ENSG00000119335|Q01105-4|SET;REV__nc|ENSG00000119335|Q01105|SET;REV__nc|ENSG00000230667|P0DME0-1|SETSIP 26.268140514670165 0.1969607489560049 5 KTT[{I|L}P]T[HS]K 9 -1 61.876 0.0 0.0 5.7528 0.0 0.0 63.997299067440345 0.0 63.997299067440345 0.0 44.10630432164661 0.0 0.0 0 2.1307196863200843 0.0 1.774227503252014 0.3494850021680094 KTT[{I|L}P]T[HS]K 5.7528 - 546 + 1 3.059 114109.1 0.800000011920929 761 3568 4330 SUDHL4_400M_050219_1,4331 SUDHL4_400M_050219_1,4331,KNQTQSSRK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4332 20.753 800.0 156540.0 25 0 21902.0 + + -1 GGGGGGGLGSGGSIR 15 115 573.2863166983202 1144.5580804634403 2 573.2859374880791 MULTI CID FTMS 0 0 0 4330 89416.140625 0.5870781586250883 -4 0.0382728576660156 2 Carbamidomethyl (C) _NNGLNC(Carbamidomethyl (C))IDLI_ ENSG00000171403|ENST00000246662|KRT9;P35527 16.149105407346934 0.5765757077271437 5 [NG]GGGG{I|L}GSN{[TV]|[{I|L}S]}R 13 -1 + 72.789 0.0 0.0 6.3596 6.3596 89.63 0.0 0.0 0.0 53.74769031242573 4.802691447578653 4.802691447578653 9.072459467631006 0 1.4604093769761874 0.6020599913279624 0.2887254899964357 0.2614393726401688 [NG]GGGG{I|L}GSN{[TV]|[{I|L}S]}R;[NG]GGGG{I|L}GSGG{[TV]|[{I|L}S]}R;[NG]GGN{I|L}GSN{[TV]|[{I|L}S]}R;[NG]NGG{I|L}GSN{[TV]|[{I|L}S]}R;[NG]GNG{I|L}GSN{[TV]|[{I|L}S]}R;[NG]GGGG{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KEP;[NG]GGGG{I|L}GG[SG]{[TV]|[{I|L}S]}R;[NG]GGGG{I|L}[YV][KS]H;[NG]GGGG{I|L}N[SG]{[TV]|[{I|L}S]}R;[NG]GGN{I|L}GSGG{[TV]|[{I|L}S]}R 6.3596;5.5669;5.5124;5.4466;5.4081;4.9598;4.92;4.7762;4.7543;4.7174 -;-;-;-;-;-;-;-;-;- 1251 + 1 3.059 95337.0 0.5799999833106995 762 3568 4330 SUDHL4_400M_050219_1,4332 SUDHL4_400M_050219_1,4332,NNGLNCIDLI False False GGGGGGGLGSGGSIR 20.75342 573.285937488079 863862.1875 4330.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 5.093618551890056 2.0 False 15.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4335 20.763 154.0 311400.0 25 0 42405.0 + + 34228 TVPPPPAAA 9 76 410.732019339409 819.4494857456181 2 410.7317993044853 MULTI CID FTMS 0 0 0 4334 340211.34375 0.7064442983116996 -2 0.0340843200683593 1 Unmodified _SLPPPAPAA_ ENSG00000150990|ENST00000308736|DHX37 34.18733598223924 0.1073653526364521 5 {[TV]|[{I|L}S]}PPP[PA]AA 9 -1 + 47.118 0.0 0.0 5.75 5.75 90.989 0.0 0.0 0.0 17.84826562528984 13.010299956639813 13.010299956639813 12.67606240177031 0 0.3807196863200844 2.0 0.0 0.0 {[TV]|[{I|L}S]}PPP[PA]AA;{[TV]|[{I|L}S]}[YK][PA]AA;{[TV]|[{I|L}S]}PPPN[VP];{[TV]|[{I|L}S]}PPPGG[VP];{[TV]|[{I|L}S]}[YK]N[VP];{[TV]|[{I|L}S]}[YK]GG[VP] 5.75;4.2031;4.1623;3.032;2.6237;1.4851 +;-;-;-;-;- + 182 + 1 3.059 44139.7 1.0 763 3570 4334 SUDHL4_400M_050219_1,4335 SUDHL4_400M_050219_1,4335,SLPPPAPAA False False TVPPPPAAA 20.76289 410.731799304485 5406374.0 4334.0 ENSG00000150990|ENST00000308736|DHX37 3.2911285559336343 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4336 20.777 800.0 168350.0 25 0 18933.0 + 17704 KPTKKYFN 8 132 513.2907364689861 1024.566920004772 2 513.2906371951103 MULTI CID FTMS 0 0 0 4334 191985.640625 0.278491533704665 18 -0.339324951171875 2 Unmodified _KPTKKYFN_ REV__ENSG00000278685|ENST00000615129|IQCA1L 21.74664581756881 0.5868176546531598 5 KPT 3 -1 43.5 0.0 0.0 4.2457 0.0 0.0 0.0 695.3490199741551 695.3490199741551 20.31234684152075 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 KPT 4.2457 + + 336 + 1 3.059 108102.7 0.800000011920929 764 3570 4334 SUDHL4_400M_050219_1,4336 SUDHL4_400M_050219_1,4336,KPTKKYFN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4337 20.791 800.0 120680.0 25 0 13602.0 43241 WDAINKDQRS 10 104 616.8027354038163 1231.5909178744323 2 616.8021728396416 MULTI CID FTMS 0 0 0 4334 118923.890625 0.5879315934530048 -1 0.0039234161376953 3 Unmodified _WDAINKDQRS_ ENST00000476051.5_1_19:35994325-36001271:-|nuORF;nc|ENSG00000161249|Q6E0U4-3|DMKN;nc|ENSG00000161249|Q6E0U4-5|DMKN;nc|ENSG00000161249|Q6E0U4-6|DMKN;nc|ENSG00000161249|Q6E0U4-7|DMKN 21.53697664764585 0.484802182336468 5 [SG]GGGGGG{I|L}GSGGS{I|L}R 16 15 + 110.02 0.0 0.0 8.9331 8.9331 86.145 0.0 0.0 0.0 78.20451852819602 10.61033795144553 10.61033795144553 0.6888128940781257 0 2.3481362441963327 1.0 0.2614393726401688 0.3494850021680094 [SG]GGGGGG{I|L}GSGGS{I|L}R;[SG]GGGGGG{I|L}GSNS{I|L}R;[SG]GGGGN{I|L}GSGGS{I|L}R;[SG]GGGGN{I|L}GSNS{I|L}R;[SG]GNGGG{I|L}GSGGS{I|L}R;[SG]GGGNG{I|L}GSGGS{I|L}R;[SG]NGGGG{I|L}GSGGS{I|L}R;[SG]GGNGG{I|L}GSGGS{I|L}R;[SG]GNGGG{I|L}GSNS{I|L}R;[SG]GGGNG{I|L}GSNS{I|L}R 8.9331;8.8772;8.3883;8.334;8.1242;8.1242;8.0792;8.0792;8.0699;8.0699 -;-;-;-;-;-;-;-;-;- 2418 + 1 3.059 74916.0 0.6700000166893005 765 3570 4334 SUDHL4_400M_050219_1,4337 SUDHL4_400M_050219_1,4337,WDAINKDQRS False False False False non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_1 4338 20.804 800.0 86403.0 25 0 6792.3 + 2599 ASNDYTQQATQ 11 88 634.7735625090106 1267.5325720848211 2 634.7732421755791 MULTI CID FTMS 0 0 0 4334 108464.5390625 0.6381812598915271 -2 0.0340843200683593 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNDYTQQATQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 43.9818466556824 0.1510575460884947 5 TQ 2 9 31.766 0.0 0.0 2.5061 0.0 0.0 1020.4151537272024 0.0 1020.4151537272024 0.0 5.883774982825614 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.7302046884880937 + TQ 2.5061 + + 642 + 1 3.059 55360.8 0.6299999952316284 766 3570 4334 SUDHL4_400M_050219_1,4338 SUDHL4_400M_050219_1,4338,ASNDYTQQATQ False False ASNDYTQQATQ 20.80439 634.773242175579 957079.75 4334.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 5.910720189412435 2.0 True 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4339 20.818 800.0 119830.0 25 0 6194.7 + 28217 GGGGGGLGSGGSIR 14 146 544.2729272016742 1086.5313014701485 2 544.7742187380791 MULTI CID FTMS 0 0 0 4334 98933.6875 0.5042919430841762 -2 0.0340843200683593 5 Unmodified _PQNAYDPVAI_ ENSG00000171403|ENST00000246662|KRT9;P35527 19.256988751693697 0.5244284437930726 5 EPQDT[WK]A{I|L} 9 7 + 42.393 0.0 0.0 3.9017 3.9017 76.298 0.0 0.0 0.0 21.22875177120213 10.63486257521106 10.63486257521106 1.7609125905568137 0 0.0 0.5528419686577808 0.5 0.2302046884880938 EPQDT[WK]A{I|L};EPDQT[WK]A{I|L};EP[AG]DT[WK]A{I|L};EPD[AG]T[WK]A{I|L};[QP]EDT[WK]A{I|L};EPD{I|L}GST{[NV]|[RG]}R;EPD{[DS]|[MA]|[CV]|TT}K{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}GQT[WK]A{I|L};EPD{I|L}G[Y{I|L}][PS]P;[QP]Q[HA][WH]A{I|L} 3.9017;3.7396;3.0542;2.8922;2.3931;2.1861;1.9052;1.7534;1.4358;1.4016 -;-;-;-;-;-;-;-;-;- 643 + 1 3.059 77519.5 0.6399999856948853 767 3570 4334 SUDHL4_400M_050219_1,4339 SUDHL4_400M_050219_1,4339,PQNAYDPVAI False False GGGGGGLGSGGSIR 20.818221 544.2732 1500048.625 4334.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 2.391857465108236 2.0 False 14.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4340 20.832 800.0 178470.0 25 0 8130.4 + 30342 RAFPNKQGY 9 144 540.7829401555903 1079.5513273779804 2 540.7829467654228 MULTI CID FTMS 0 0 0 4334 161457.0625 0.2350280138918116 94 -1.4231452941894531 6 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 56.17704186161178 0.0281986971544335 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PNKQGY 9 0 + 54.492 0.0 0.0 5.0477 5.0477 82.603 0.0 0.0 0.0 3.2568864632742844 42.01776709795472 3.2568864632742844 4.27440017027358 0 1.778659694992122 0.0 0.0 0.6307196863200843 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PNKQGY;[{I|L}A]{[WT]|[RM]}NKQGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PGGKQGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PNK[AG]GY;[{I|L}A]{[WT]|[RM]}GGKQGY;[{I|L}A]{[WT]|[RM]}NK[AG]GY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}P[KG]GQGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PGGK[AG]GY;[{I|L}A]{[WT]|[RM]}[KG]GQGY;[HT]QGV[TA]NRP 5.0477;4.6517;4.1947;4.1947;3.7987;3.7987;3.6618;3.3458;3.2659;3.1929 +;-;-;-;-;-;-;-;-;- + 1496 1 3.059 113527.5 0.7799999713897705 768 3570 4334 SUDHL4_400M_050219_1,4340 SUDHL4_400M_050219_1,4340,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4342 20.837 79.0 698030.0 25 0 164230.0 42690 VTWEVLEGEV 10 70 387.5315850327332 1159.5729256983998 3 387.5314819216728 MULTI CID FTMS 0 0 0 4341 332837.59375 0.3408497572660649 7 -0.1096706390380859 1 Unmodified _VTWEVLEGEV_ ENSG00000138385|ENST00000260956|SSB;ENST00000438469.2_1_1:146553889-146554591:-|nuORF 13.90604991867851 0.6142120002215601 5 VTER 4 7 44.144 0.0 0.0 3.807 0.0 0.0 0.0 671.2935274713499 671.2935274713499 40.16502535772155 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.4247425010840047 VTER 3.807 - 12 + 1 3.033 52459.2 1.0 769 3571 4341 SUDHL4_400M_050219_1,4342 SUDHL4_400M_050219_1,4342,VTWEVLEGEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4343 20.842 274.0 201070.0 25 0 29319.0 + 33975 SLIGAWIVK 9 86 493.8032712035297 985.5919894738596 2 493.8032409548759 MULTI CID FTMS 0 0 0 4341 150011.6875 0.2021133514940486 5 -0.0895423889160156 2 Unmodified _SLIGAWIVK_ REV__ENSG00000136010|ENST00000258494|ALDH1L2;REV__nc|ENSG00000136010|Q3SY69-3|ALDH1L2 26.88365393820708 0.1891292719743517 5 {M(Oxidation (M))|F}TVK 4 -1 53.8 0.0 0.0 5.4587 0.0 0.0 492.2954273908219 0.0 492.2954273908219 0.0 32.37334396171555 0.0 0.0 0 2.0 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}TVK 5.4587 - 155 1 3.033 48652.3 1.0 770 3571 4341 SUDHL4_400M_050219_1,4343 SUDHL4_400M_050219_1,4343,SLIGAWIVK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4344 20.846 167.0 510250.0 25 0 42959.0 + 34 AAAPPAKEI 9 82 434.25045496566753 866.4863569981351 2 434.2494079470634 MULTI CID FTMS 0 0 0 4341 415771.4375 0.6948854803790628 16 -0.260843276977539 3 Unmodified _AAAPPAKEI_ ENSG00000166851|ENST00000300093|PLK1 13.90604991867851 0.4602628045680013 5 [PA]KH 4 6 25.406 0.0 0.0 2.9321 0.0 0.0 0.0 430.21337985530766 430.21337985530766 1.4536501951208436 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [PA]KH 2.9321 - 102 1 3.033 70465.8 1.0 771 3571 4341 SUDHL4_400M_050219_1,4344 SUDHL4_400M_050219_1,4344,AAAPPAKEI False True AAAPPAKEI 20.845744 434.249407947063 10323515.0 4341.0 ENSG00000166851|ENST00000300093|PLK1 3.6550892194112143 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4345 20.848 105.0 462200.0 25 0 106040.0 + 1797 ALSPNNHEV 9 67 490.7433577554746 0 490.7436401247978 PEAK CID FTMS 0 0 0 4341 255915.9375 0.3224961811108429 -9 0.1556644439697265 4 Unmodified _ALSPNNHEV_ ENSG00000241685|ENST00000262942|ARPC1A 17.11289562659939 0.230679707888486 5 SP 2 7 20.217 0.0 0.0 2.064 0.0 0.0 184.1174395326305 608.2464693658811 792.3639088985117 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + SP 2.064 + + 17 + 1 3.033 42566.1 1.0 772 3571 4341 SUDHL4_400M_050219_1,4345 SUDHL4_400M_050219_1,4345,ALSPNNHEV False True ALSPNNHEV 20.847975 490.743640124798 3831380.75 4341.0 ENSG00000241685|ENST00000262942|ARPC1A 6.497017701466878 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4346 20.862 800.0 122990.0 25 0 39127.0 + 38997 TVREEGAGRW 10 83 580.79416681661 1159.5737807000198 2 580.7942993044853 MULTI CID FTMS 0 0 0 4341 134191.28125 0.3216001515836901 9 -0.1463489532470703 5 Unmodified _TVREEGAGRW_ REV__ENST00000529313.5_1_11:17298611-17304373:+|nuORF 15.248480904072842 0.5916873121453583 5 {[TV]|[{I|L}S]}EA[{I|L}T]QAET 10 -1 34.9 0.0 0.0 3.0097 0.0 0.0 0.0 113.07509840925732 113.07509840925732 15.920234257298276 0.0 0.0 0.0 0 1.079689690656103 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}EA[{I|L}T]QAET 3.0097 - 277 1 3.033 79968.7 0.6000000238418579 773 3571 4341 SUDHL4_400M_050219_1,4346 SUDHL4_400M_050219_1,4346,TVREEGAGRW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4347 20.876 800.0 132670.0 25 0 36910.0 -1 0 44 1163.4827123036562 3487.4263075111685 3 1163.816332995892 MULTI CID FTMS 0 0 0 4341 232497.6875 0.6258329065037556 -5 0.1380081176757812 6 5 E 1 -1 6.9897 0.0 0.0 0.20043 0.0 0.0 2831.19777160949 524.1626680963499 3355.36043970584 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20043 - 8 + 1 3.033 94755.6 0.6200000047683716 774 3571 4341 SUDHL4_400M_050219_1,4347 SUDHL4_400M_050219_1,4347, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4349 20.887 521.0 117390.0 25 0 16886.0 + -1 KMKEIAEAY 9 93 549.7787590849285 1097.542965236657 2 549.7795287966728 MULTI CID FTMS 0 0 0 4348 129098.0390625 1.0 0 0.0 1 Oxidation (M) _KM(Oxidation (M))KEIAEAY_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000204388|ENST00000375650|HSPA1B;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENSG00000204389|ENST00000375651|HSPA1A;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 20.41453444215458 0.284085796332423 5 {I|L}EAY 4 -1 35.918 0.0 0.0 3.2725 0.0 0.0 603.3067494123062 0.0 603.3067494123062 0.0 23.610469015915783 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}EAY 3.2725 - 250 1 3.033 51787.1 1.0 775 3572 4348 SUDHL4_400M_050219_1,4349 SUDHL4_400M_050219_1,4349,KMKEIAEAY False False KMKEIAEAY 20.887083 549.779528796673 668251.125 4348.0 ENSG00000109971|ENST00000534624|HSPA8;;ENSG00000126803|ENST00000247207|HSPA2;;nc|ENSG00000109971|P11142-2|HSPA8;;ENSG00000204388|ENST00000375650|HSPA1B;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENSG00000204389|ENST00000375651|HSPA1A;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 3.857155164082845 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4350 20.895 433.0 184690.0 25 0 44320.0 -1 0 93 532.2917853524713 531.2845088858712 1 532.2940551638603 MULTI CID FTMS 0 0 0 4348 115049.2265625 0.98212235062972 16 -0.2212715148925781 2 5 K 1 -1 15.357 0.0 0.0 2.8905 0.0 0.0 385.1789160897759 0.0 385.1789160897759 0.0 5.268024924119672 0.0 0.0 0 0.0 0.0 0.0 0.1861818737241735 K 2.8905 - 26 + 1 3.033 71363.5 1.0 776 3572 4348 SUDHL4_400M_050219_1,4350 SUDHL4_400M_050219_1,4350, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4351 20.909 800.0 36812.0 25 0 8596.6 -1 0 32 1191.1426573097706 3570.406142529512 3 1191.478686511517 MULTI CID FTMS 0 0 0 4348 85214.0078125 0.0177751001379846 62 -0.7850742340087891 3 5 G 1 -1 6.9897 0.0 0.0 0.19577 0.0 0.0 2147.7537510273623 1362.6028284010995 3510.356579428462 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19577 - 5 + 1 3.033 34393.4 0.3499999940395355 777 3572 4348 SUDHL4_400M_050219_1,4351 SUDHL4_400M_050219_1,4351, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4354 20.918 143.0 633950.0 25 0 74129.0 + 16750 KFKFPGRQK 9 91 379.2293283206942 1134.6661555622827 3 379.2292968630791 MULTI CID FTMS 0 0 0 4353 292902.9375 0.3076758794745139 -9 0.2225761413574218 1 Unmodified _KFKFPGRQK_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000491035.5_1_X:153628724-153629192:+|nuORF 32.30548876998284 0.1201446275138228 5 K[RH]EK[EP]{M(Oxidation (M))|F} 8 8 26.119 0.0 0.0 2.3019 0.0 0.0 0.0 80.0513170831664 80.0513170831664 13.16061246681059 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 K[RH]EK[EP]{M(Oxidation (M))|F} 2.3019 - 68 + 1 3.006 76233.7 1.0 778 3574 4353 SUDHL4_400M_050219_1,4354 SUDHL4_400M_050219_1,4354,KFKFPGRQK True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4357 20.938 800.0 145940.0 25 0 23904.0 + 40831 VLNEQVKEA 9 129 515.2831707200547 1028.5517885069094 2 515.2824584841728 MULTI CID FTMS 0 0 0 4356 87203.984375 0.7094023226754766 -1 0.0038185119628906 1 Unmodified _VLNEQVKEA_ ENSG00000132780|ENST00000350030|NASP;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;ENST00000529239.1_1_8:61850552-61850903:-|nuORF;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP;nc|ENSG00000132780|P49321-4|NASP 24.99096001346401 0.2132109383330889 5 [{I|L}V]NEQV{[QS]|[NT]}{I|L} 9 3 + 52.585 0.0 0.0 5.1125 5.1125 81.045 0.0 0.0 0.0 36.3869678002162 1.0912231267376526 1.0912231267376526 2.8082660957569416 0 0.805462187404089 2.0 0.6861818737241735 0.0 [{I|L}V]NEQV{[QS]|[NT]}{I|L};[{I|L}V]NEQV[QT]V;[{I|L}V]NE[AG]V{[QS]|[NT]}{I|L};[{I|L}V]GGEQV{[QS]|[NT]}{I|L};[{I|L}V]NE[AG]V[QT]V;[{I|L}V]GGEQV[QT]V 5.1125;4.8395;4.2172;4.2172;3.9442;3.9442 -;-;-;-;-;- 362 + 1 3.006 94523.4 0.6800000071525574 779 3576 4356 SUDHL4_400M_050219_1,4357 SUDHL4_400M_050219_1,4357,VLNEQVKEA False True VLNEQVKEA 20.937683 515.282458484173 368312.9375 4356.0 nc|ENSG00000132780|P49321-2|NASP;;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;;ENSG00000132780|ENST00000350030|NASP;;nc|ENSG00000132780|P49321-4|NASP;;nc|ENSG00000132780|P49321-3|NASP;;ENST00000529239.1_1_8:61850552-61850903:-|nuORF 5.071303208669026 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4360 20.946 47.0 1029600.0 25 0 138010.0 + 17684 KPTGARPSAL 10 57 499.2933038868565 996.572054840513 2 499.2931701540947 MULTI CID FTMS 0 0 0 4359 943513.1875 0.4154410647735558 9 -0.1511726379394531 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 18.373094154950223 0.5392593366289069 5 KPT 3 7 43.94 0.0 0.0 4.4091 0.0 0.0 0.0 667.3535860650999 667.3535860650999 29.758950235313858 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 + KPT 4.4091 + + 71 + 1 3.006 44593.6 1.0 780 3578 4359 SUDHL4_400M_050219_1,4360 SUDHL4_400M_050219_1,4360,KPTGARPSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4361 20.96 800.0 66769.0 25 0 7725.9 + -1 DKCCLGKYCK 10 89 666.2972680172056 1330.5799831012112 2 666.2966796755791 MULTI CID FTMS 0 0 0 4359 86886.046875 1.0 0 0.0 2 3 Carbamidomethyl (C) _DKC(Carbamidomethyl (C))C(Carbamidomethyl (C))LGKYC(Carbamidomethyl (C))K_ REV__ENSG00000197140|ENST00000379907|ADAM32 8.745405648335112 0.6861838735306406 5 [EP]AWYSA 7 -1 35.265 0.0 0.0 2.6504 0.0 0.0 0.0 523.2267475877924 523.2267475877924 23.482742590973853 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.7742275032520141 0.0 [EP]AWYSA 2.6504 - 195 1 3.006 42584.4 0.6299999952316284 781 3578 4359 SUDHL4_400M_050219_1,4361 SUDHL4_400M_050219_1,4361,DKCCLGKYCK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4362 20.974 800.0 21242.0 25 0 1980.5 -1 0 34 983.7487047759436 2948.22428492803 3 984.083544909954 MULTI CID FTMS 0 0 0 4359 94898.6953125 1.0 0 0.0 3 5 E 1 -1 7.2185 0.0 0.0 0.24484 0.0 0.0 1964.8076722344736 851.3278902643186 2816.1355624987923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 E 0.24484 - 1 + 1 3.006 18670.8 0.5799999833106995 782 3578 4359 SUDHL4_400M_050219_1,4362 SUDHL4_400M_050219_1,4362, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4365 20.984 145.0 403830.0 25 0 59211.0 + -1 EKLNGQLMK 9 75 538.7920590499077 1075.5695651666151 2 538.7920410037041 MULTI CID FTMS 0 0 0 4364 356811.3125 0.7629369629421748 3 -0.0657672882080078 1 Oxidation (M) _EKLNGQLM(Oxidation (M))K_ REV__ENSG00000129596|ENST00000250535|CDO1;REV__ENST00000502631.1_1_5:115145323-115152339:-|nuORF 15.847184025352805 0.4077185912009129 5 KTT 3 -1 38.94 0.0 0.0 3.6204 0.0 0.0 63.996723814500974 678.3584671623347 742.3551909768357 0.0 0.0 0.0 0.0 0 1.0 0.0 1.274227503252014 0.0 KTT 3.6204 - 100 + 1 2.989 49686.8 1.0 783 3580 4364 SUDHL4_400M_050219_1,4365 SUDHL4_400M_050219_1,4365,EKLNGQLMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4366 20.997 800.0 189490.0 25 0 14349.0 + 2476 AQYEDIAQK 9 147 533.2647881405283 1064.5150233478564 2 533.2636596560478 MULTI CID FTMS 0 0 0 4364 122393.640625 0.3656171430774506 -5 0.0606250762939453 2 Unmodified _AQYEDIAQK_ ENSG00000167768|ENST00000252244|KRT1 47.594388314883695 0.0456443387682827 5 [QA]YED{I|L}AQK 9 0 [QA] + + 48.904 18.015 9.0484 4.594 4.594 58.043 0.0 0.0 0.0 0.0 21.988349744983545 0.0 0.0 0 1.1307196863200843 0.0 0.3252574989159953 0.5451140161145328 + + [QA]YED{I|L}AQK 4.594 + + 525 + 1 2.989 117125.1 0.699999988079071 784 3580 4364 SUDHL4_400M_050219_1,4366 SUDHL4_400M_050219_1,4366,AQYEDIAQK True True AQYEDIAQK 20.997405 533.263659656048 1420459.0 4364.0 ENSG00000167768|ENST00000252244|KRT1 6.382296721140544 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4367 21.005 404.0 204660.0 25 0 47066.0 -1 0 95 458.2348414389701 457.22756497237015 1 458.2347289919853 MULTI CID FTMS 0 0 0 4364 116889.0703125 0.8832014062462922 -4 0.0568065643310546 3 5 [Y{I|L}]Y 3 -1 [Y{I|L}] + + 12.218 -0.16712 -0.060517 2.6723 2.6723 53.625 0.0 0.0 0.0 0.0 1.3810320596947443 0.0 0.0 0 0.0 0.0 0.0 0.0 [Y{I|L}]Y 2.6723 - 17 + 1 2.989 68034.0 1.0 785 3580 4364 SUDHL4_400M_050219_1,4367 SUDHL4_400M_050219_1,4367, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4370 21.016 278.0 222930.0 25 0 23486.0 + 34229 SLPPPAPAA 9 95 410.732019339409 819.4494857456181 2 410.7318298220634 MULTI CID FTMS 0 0 0 4369 144731.90625 0.3005338647062556 10 -0.1333904266357422 1 Unmodified _SLPPPAPAA_ REV__ENSG00000204371|ENST00000375537|EHMT2;REV__ENST00000480912.5_1_6:31847863-31860642:-|nuORF;REV__nc|ENSG00000204371|Q96KQ7-2|EHMT2 40.44857923139169 0.0729940656229577 5 {[TV]|[{I|L}S]}PPP[PA]AA 9 -1 + 49.693 0.0 0.0 6.0642 6.0642 92.507 0.0 0.0 0.0 31.10953604214357 11.003793646015652 11.003793646015652 16.197887582883936 0 0.6382104921644451 2.0 0.0 0.0 {[TV]|[{I|L}S]}PPP[PA]AA;{[TV]|[{I|L}S]}[YK][PA]AA;{[TV]|[{I|L}S]}PPP{[NV]|[RG]}P;{[TV]|[{I|L}S]}[YK]{[NV]|[RG]}P 6.0642;4.0875;3.8878;1.9194 +;-;-;- + 162 + 1 2.989 54544.8 1.0 786 3582 4369 SUDHL4_400M_050219_1,4370 SUDHL4_400M_050219_1,4370,SLPPPAPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4371 21.03 800.0 53378.0 25 0 14070.0 -1 0 31 1155.451507652794 3463.332693558583 3 1155.781787097454 MULTI CID FTMS 0 0 0 4369 40139.76171875 0.077607389457844 -10 0.1332416534423828 2 5 E 1 -1 6.9897 0.0 0.0 0.20182 0.0 0.0 2807.103971800344 524.1623018854124 3331.2662736857565 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20182 - 4 + 1 2.989 46357.8 0.4600000083446502 787 3582 4369 SUDHL4_400M_050219_1,4371 SUDHL4_400M_050219_1,4371, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4372 21.044 800.0 210830.0 25 0 21000.0 + 16752 KFKFPGRQK 9 120 568.3410772966286 1134.667601660057 2 568.3406860232353 MULTI CID FTMS 0 0 0 4369 100890.140625 0.7838358600740053 -2 0.0304775238037109 3 Unmodified _KFKFPGRQK_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000491035.5_1_X:153628724-153629192:+|nuORF 34.40172386719151 0.1061884637610825 5 K{M(Oxidation (M))|F}K{M(Oxidation (M))|F}K 5 4 61.682 0.0 0.0 5.4362 0.0 0.0 0.0 453.22268605440246 453.22268605440246 46.479400086720375 0.0 0.0 0.0 0 1.566901560044258 0.0 0.0 0.805462187404089 K{M(Oxidation (M))|F}K{M(Oxidation (M))|F}K 5.4362 - 358 + 1 2.989 128143.1 0.6399999856948853 788 3582 4369 SUDHL4_400M_050219_1,4372 SUDHL4_400M_050219_1,4372,KFKFPGRQK True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4375 21.058 341.0 216570.0 25 0 30949.0 8208 EPSTQYLHI 9 93 544.2729272016742 1086.5313014701485 2 544.2734252810478 MULTI CID FTMS 0 0 0 4374 178408.53125 0.4618538961800665 10 -0.1340293884277343 1 Unmodified _EPSTQYLHI_ ENSG00000066827|ENST00000377838|ZFAT;ENST00000523243.5_1_8:135490727-135577256:-|nuORF;nc|ENSG00000066827|Q9P243-2|ZFAT;nc|ENSG00000066827|Q9P243-4|ZFAT 15.847184025352805 0.4077185912009129 5 EPQDT[WK]A{I|L} 9 6 + 47.445 0.0 0.0 4.3666 4.3666 80.605 0.0 0.0 0.0 14.736607226101556 12.4299722884194 12.4299722884194 4.279032320494807 0 0.0 0.0 0.3807196863200844 0.3494850021680094 EPQDT[WK]A{I|L};EPQ{[MG]|[TS]}{I|L}{[WN]|[YH]}{I|L};EP[AG]DT[WK]A{I|L};EP[C(Carbamidomethyl (C))R]{I|L}{[WN]|[YH]}{I|L} 4.3666;3.9728;3.5191;3.0262 -;-;-;- 198 + 1 2.979 61189.1 1.0 789 3584 4374 SUDHL4_400M_050219_1,4375 SUDHL4_400M_050219_1,4375,EPSTQYLHI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4376 21.072 800.0 182990.0 25 0 11349.0 + 25293 NADPASHEI 9 141 477.2192431366869 952.423933340174 2 477.2188903689384 MULTI CID FTMS 0 0 0 4374 117379.5234375 0.5936167559730977 -7 0.1104660034179687 2 Unmodified _NADPASHEI_ ENSG00000136699|ENST00000680298|SMPD4;ENST00000415574.6_1_2:132258965-132266117:+|nuORF;ENST00000433118.5_1_2:130917171-130932539:-|nuORF;ENST00000473720.5_1_2:130913661-130934206:-|nuORF;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4 52.268347100219714 0.0353964759249114 5 {[QG]|[NA]}DPASD 7 3 48.65 0.0 0.0 5.108 0.0 0.0 0.0 279.1462496393188 279.1462496393188 37.229811400246106 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.4247425010840047 0.0 {[QG]|[NA]}DPASD 5.108 - 389 + 1 2.979 114130.6 0.6399999856948853 790 3584 4374 SUDHL4_400M_050219_1,4376 SUDHL4_400M_050219_1,4376,NADPASHEI True True NADPASHEI 21.07183 477.218890368938 1167185.125 4374.0 nc|ENSG00000136699|Q9NXE4-4|SMPD4;;nc|ENSG00000136699|Q9NXE4-3|SMPD4;;ENSG00000136699|ENST00000680298|SMPD4;;ENST00000433118.5_1_2:130917171-130932539:-|nuORF;;nc|ENSG00000136699|Q9NXE4-6|SMPD4;;nc|ENSG00000136699|Q9NXE4-2|SMPD4;;ENST00000415574.6_1_2:132258965-132266117:+|nuORF;;ENST00000473720.5_1_2:130913661-130934206:-|nuORF;;nc|ENSG00000136699|Q9NXE4|SMPD4 6.417111078898112 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4379 21.087 505.0 121660.0 25 0 14554.0 + 8955 FANDDRHVM 9 89 552.7481397730494 1103.481726612899 2 552.7483398318291 MULTI CID FTMS 0 0 0 4378 121797.5078125 0.3677808347123666 -8 0.1342582702636718 1 Unmodified _FANDDRHVM_ ENSG00000165209|ENST00000348403|STRBP 38.61474834105838 0.0830609365873449 5 {M(Oxidation (M))|F}ANDDRHVM 9 0 + 71.636 0.0 0.0 6.4918 6.4918 91.262 0.0 0.0 0.0 54.41753481464637 10.72559982972642 10.72559982972642 9.208187539523747 0 1.7302046884880935 0.0 0.0 0.0 + + {M(Oxidation (M))|F}ANDDRHVM;{M(Oxidation (M))|F}AGGDDRHVM;{M(Oxidation (M))|F}E[NG]DRHVM;{M(Oxidation (M))|F}A[{M(Oxidation (M))|F}T][HD]HVM;{M(Oxidation (M))|F}T{M(Oxidation (M))|F}A[HD]HVM;{M(Oxidation (M))|F}A[{M(Oxidation (M))|F}E][HS]HVM;[{M(Oxidation (M))|F}T]H[VG]DDN{[TV]|[{I|L}S]};{M(Oxidation (M))|F}TH[MT]THVM;{M(Oxidation (M))|F}{[WN]|[YH]}D[VG]HVM;{M(Oxidation (M))|F}TT[HM]THVM 6.4918;5.6574;4.6805;3.639;3.6303;3.3662;3.3258;3.2904;3.2541;3.1979 +;-;-;-;-;-;-;-;-;- + 397 + 1 2.979 54863.5 1.0 791 3586 4378 SUDHL4_400M_050219_1,4379 SUDHL4_400M_050219_1,4379,FANDDRHVM True True FANDDRHVM 21.087146 552.748339831829 1551410.25 4378.0 ENSG00000165209|ENST00000348403|STRBP 8.162816683451334 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4380 21.093 299.0 207980.0 25 0 26185.0 + 34655 SPPPPPPPP 9 97 441.740137657774 881.465722382348 2 441.7397949099541 MULTI CID FTMS 0 0 0 4378 90195.390625 0.1343806330403663 -16 0.3183975219726562 2 Unmodified _SPPPPPPPP_ ENSG00000103479|ENST00000262133|RBL2;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENSG00000099999|ENST00000382363|RNF215;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000136754|Q8IZP0-8|ABI1;ENSG00000100312|ENST00000216139|ACR;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;ENSG00000139800|ENST00000267294|ZIC5;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000164944|Q69YN4-4|VIRMA;ENSG00000109920|ENST00000263773|FNBP4;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000260428|ENST00000567180|SCX;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000109920|Q8N3X1-2|FNBP4;ENSG00000274209|ENST00000620264|ANTXRL;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000136754|ENST00000376140|ABI1;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;ENSG00000107816|ENST00000454422|LZTS2;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;ENSG00000184863|ENST00000401878|RBM33;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217;nc|ENSG00000136754|Q8IZP0-12|ABI1 70.71552829651908 0.0208223590022201 5 [PS]PPPP[YK] 8 3 + 57.687 0.0 0.0 6.5445 6.5445 94.043 0.0 0.0 0.0 17.659167939666318 41.3756275483518 17.659167939666318 19.42008053022313 0 1.2302046884880935 1.6989700043360187 0.9802046884880936 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[PS][YK]P[YK];[PS]P[YK][YK];[PS]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK];{[HG]|PP}S[YK][YK];{[NV]|[RG]}[YV]P[YK] 6.5445;4.3413;3.5527;3.4334;2.7887;1.2302;0.65205 -;-;-;-;-;-;- 154 1 2.979 55117.9 1.0 792 3586 4378 SUDHL4_400M_050219_1,4380 SUDHL4_400M_050219_1,4380,SPPPPPPPP False False SPPPPPPPP 21.092615 441.739794909954 26169368.0 4378.0 ENSG00000103479|ENST00000262133|RBL2;;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;;ENSG00000099999|ENST00000382363|RNF215;;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;;nc|ENSG00000136754|Q8IZP0-8|ABI1;;ENSG00000100312|ENST00000216139|ACR;;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;;nc|ENSG00000136754|Q8IZP0-7|ABI1;;nc|ENSG00000136754|Q8IZP0-10|ABI1;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000136754|Q8IZP0-11|ABI1;;nc|ENSG00000136754|Q8IZP0-3|ABI1;;ENSG00000139800|ENST00000267294|ZIC5;;nc|ENSG00000136754|Q8IZP0-5|ABI1;;nc|ENSG00000164944|Q69YN4-4|VIRMA;;ENSG00000109920|ENST00000263773|FNBP4;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000260428|ENST00000567180|SCX;;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;;nc|ENSG00000109920|Q8N3X1-2|FNBP4;;ENSG00000274209|ENST00000620264|ANTXRL;;nc|ENSG00000136754|Q8IZP0-4|ABI1;;nc|ENSG00000136754|Q8IZP0-6|ABI1;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA;;ENSG00000136754|ENST00000376140|ABI1;;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;;ENSG00000107816|ENST00000454422|LZTS2;;nc|ENSG00000136754|Q8IZP0-2|ABI1;;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;;ENSG00000184863|ENST00000401878|RBM33;;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;;ENSG00000126461|ENST00000360565|SCAF1;;ENSG00000127666|ENST00000248244|TICAM1;;nc|ENSG00000136754|Q8IZP0|ABI1;;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;;ENSG00000120549|ENST00000376454|KIAA1217;;nc|ENSG00000136754|Q8IZP0-12|ABI1 5.058576583862305 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4383 21.113 800.0 149990.0 25 0 9676.8 + 20980 LNNMRSQY 8 147 513.2453866797799 1024.4762204263598 2 513.2457153201103 MULTI CID FTMS 0 0 0 4382 61199.94921875 0.7320382014063638 1 -0.0209331512451171 1 Unmodified _LNNMRSQY_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 30.63653989081413 0.3996269429323407 5 {I|L}N{[{M(Oxidation (M))|F}H]|[RQ]}C[KT]Y 8 4 + 51.309 0.0 0.0 5.0083 5.0083 85.313 0.0 0.0 0.0 35.82416436005636 7.579992504528391 7.579992504528391 8.286375745755542 0 0.4247425010840047 0.8239087409443188 0.2887254899964357 0.6549471895720984 {I|L}N{[{M(Oxidation (M))|F}H]|[RQ]}C[KT]Y;{I|L}NNMM[KQ]{M(Oxidation (M))|F};{I|L}NN{[MG]|[TS]}SRAY;{I|L}NN{[MG]|[TS]}SGVAY;{I|L}NN{[WT]|[RM]}[KC]{M(Oxidation (M))|F};{I|L}NGGMM[KQ]{M(Oxidation (M))|F};{I|L}NN{[MG]|[TS]}SRS{M(Oxidation (M))|F};{I|L}NNM[VG][KC]{M(Oxidation (M))|F};{I|L}NN{[MG]|[TS]}SGVS{M(Oxidation (M))|F};{I|L}GGNMM[KQ]{M(Oxidation (M))|F} 5.0083;4.1994;3.8896;3.6457;3.5145;3.2954;3.2839;3.1708;3.04;2.4911 -;-;-;-;-;-;-;-;-;- 840 + 1 2.979 95085.3 0.5400000214576721 793 3588 4382 SUDHL4_400M_050219_1,4383 SUDHL4_400M_050219_1,4383,LNNMRSQY False True LNNMRSQY 21.112999 513.24571532011 341030.78125 4382.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 4.101229906082153 2.0 True 8.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 4384 21.118 244.0 184150.0 25 0 41013.0 + 2768 ATPDIKSHY 9 59 516.2624459546422 0 516.2622558474541 PEAK CID FTMS 0 0 0 4382 111531.1640625 0.6843383421991552 -7 0.0920562744140625 2 Unmodified _ATPDIKSHY_ ENSG00000185043|ENST00000328649|CIB1;nc|ENSG00000185043|Q99828-2|CIB1 29.081581746732265 0.1187435359889091 5 PDM 3 7 17.039 0.0 0.0 1.6535 0.0 0.0 172.08774036895244 512.2693240107997 684.357064379752 0.0 0.0 0.0 0.0 0 0.535666875892183 0.0 0.0 0.0 PDM 1.6535 - 9 + 1 2.979 43002.8 1.0 794 3588 4382 SUDHL4_400M_050219_1,4384 SUDHL4_400M_050219_1,4384,ATPDIKSHY True False ATPDIKSHY 21.117559 516.262255847454 3580392.25 4382.0 ENSG00000185043|ENST00000328649|CIB1;;nc|ENSG00000185043|Q99828-2|CIB1 3.664449771245321 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4387 21.138 800.0 131510.0 25 0 8242.9 + 31979 RVFKSGETTY 10 118 594.3069977413888 1186.5994425495776 2 594.3066284060478 MULTI CID FTMS 0 0 0 4386 61783.32421875 0.5075474938565903 -3 0.0289630889892578 1 Unmodified _RVFKSGETTY_ ENSG00000159459|ENST00000290650|UBR1;nc|ENSG00000159459|Q8IWV7-2|UBR1 24.95707706330732 0.4079579053029958 5 Y{M(Oxidation (M))|F}TT 4 7 35.993 0.0 0.0 3.0333 0.0 0.0 0.0 671.3649996393186 671.3649996393186 10.291681396005998 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3252574989159953 0.0 Y{M(Oxidation (M))|F}TT 3.0333 - 386 + 1 2.979 81882.9 0.5799999833106995 795 3590 4386 SUDHL4_400M_050219_1,4387 SUDHL4_400M_050219_1,4387,RVFKSGETTY False True RVFKSGETTY 21.137949 594.306628406048 538278.3125 4386.0 ENSG00000159459|ENST00000290650|UBR1;;nc|ENSG00000159459|Q8IWV7-2|UBR1 7.497645854949951 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4390 21.152 406.0 226630.0 25 0 12222.0 42210 VSFRRDHLL 9 125 381.5527288880035 1141.6363572642106 3 381.5524169802666 MULTI CID FTMS 0 0 0 4389 95298.0703125 0.9972312831404788 4 -0.0585231781005859 1 Unmodified _VSFRRDHLL_ ENSG00000118217|ENST00000367942|ATF6;ENSG00000213676|ENST00000375203|ATF6B;nc|ENSG00000213676|Q99941-2|ATF6B 15.248480904072842 0.4239247793462406 5 VPHH 4 7 39.871 0.0 0.0 3.4924 0.0 0.0 0.0 668.3732999145407 668.3732999145407 26.77178082331148 0.0 0.0 0.0 0 0.3730360320760422 0.4202164033831898 0.0 0.0 VPHH 3.4924 - 95 + 1 2.979 79177.3 1.0 796 3592 4389 SUDHL4_400M_050219_1,4390 SUDHL4_400M_050219_1,4390,VSFRRDHLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4391 21.156 227.0 244590.0 25 0 18602.0 -1 0 89 411.2236284108732 410.2163519442733 1 411.2223388552666 MULTI CID FTMS 0 0 0 4389 123596.40625 0.8707216399067699 -2 0.0204105377197265 2 5 A 1 -1 11.99 0.0 0.0 2.9228 0.0 0.0 321.1681245656584 0.0 321.1681245656584 0.0 3.16734227789793 0.0 0.0 0 0.0 0.0 0.0 0.0 A 2.9228 - 4 + 1 2.979 49938.1 1.0 797 3592 4389 SUDHL4_400M_050219_1,4391 SUDHL4_400M_050219_1,4391, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4392 21.17 800.0 30566.0 25 0 1207.6 -1 0 52 948.4066356468036 2842.198077540611 3 949.0743286013604 MULTI CID FTMS 0 0 0 4389 92917.1796875 0.2303833055983841 -11 0.1374168395996093 3 5 [KQ]E 3 -1 14.934 0.0 0.0 0.52543 0.0 0.0 0.0 2453.9785395369577 2453.9785395369577 4.449237304209889 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 [KQ]E 0.52543 - 10 1 2.979 27479.9 0.4799999892711639 798 3592 4389 SUDHL4_400M_050219_1,4392 SUDHL4_400M_050219_1,4392, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4393 21.178 454.0 148010.0 25 0 43536.0 + 45234 YRPLELGPD 9 81 530.2776463534649 0 530.2789184451103 PEAK CID FTMS 0 0 0 4389 85123.4453125 0.732801679233342 -25 0.4227733612060547 4 Unmodified _YRPLELGPD_ REV__ENST00000523094.5_2_5:157285974-157286100:-|nuORF 7.910154910731844 0.3362437653303669 5 V 1 -1 3.4949 0.0 0.0 0.33016 0.0 0.0 648.3518797657204 308.08857141666255 956.440451182383 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.33016 - 3 + 1 2.979 58245.3 1.0 799 3592 4389 SUDHL4_400M_050219_1,4393 SUDHL4_400M_050219_1,4393,YRPLELGPD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4396 21.187 110.0 551620.0 25 0 55195.0 + 31213 RLQEVTHSV 9 77 534.7932709225602 1067.5719889119202 2 534.7935058474541 MULTI CID FTMS 0 0 0 4395 480931.875 0.4898278841173981 -5 0.0644245147705078 1 Unmodified _RLQEVTHSV_ ENSG00000139626|ENST00000267082|ITGB7;ENST00000549462.1_1_12:53591166-53600997:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7 51.629811660486645 0.0367964933207742 5 THSV 4 5 60.412 0.0 0.0 5.6588 0.0 0.0 625.3546620099625 0.0 625.3546620099625 0.0 42.96427490346949 0.0 0.0 0 1.6171302707394362 0.0 1.2302046884880935 0.0 + THSV 5.6588 + + 240 1 2.979 53864.5 1.0 800 3594 4395 SUDHL4_400M_050219_1,4396 SUDHL4_400M_050219_1,4396,RLQEVTHSV True True RLQEVTHSV 21.186856 534.793505847454 7839863.5 4395.0 ENST00000549462.1_1_12:53591166-53600997:-|nuORF;;ENSG00000139626|ENST00000267082|ITGB7;;nc|ENSG00000139626|P26010-2|ITGB7 6.770401477813721 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4397 21.19 151.0 435220.0 25 0 47533.0 + 16751 KFKFPGRQK 9 79 379.2293283206942 1134.6661555622827 3 379.2294494509697 MULTI CID FTMS 0 0 0 4395 222397.75 0.2336146708136141 11 -0.1817607879638672 2 Unmodified _KFKFPGRQK_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000491035.5_1_X:153628724-153629192:+|nuORF 32.30548876998284 0.1201446275138228 5 K{M(Oxidation (M))|F}K{M(Oxidation (M))|F}K[EP]{M(Oxidation (M))|F} 8 5 56.292 0.0 0.0 4.9611 0.0 0.0 0.0 80.05118738345936 80.05118738345936 50.80706579873059 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.805462187404089 K{M(Oxidation (M))|F}K{M(Oxidation (M))|F}K[EP]{M(Oxidation (M))|F} 4.9611 - 77 + 1 2.979 59033.5 1.0 801 3594 4395 SUDHL4_400M_050219_1,4397 SUDHL4_400M_050219_1,4397,KFKFPGRQK True True KFKFPGRQK 21.189863 379.22944945097 10527297.8125 4395.0 ENST00000491035.5_1_X:153628724-153629192:+|nuORF;;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;;ENSG00000147403|ENST00000369817|RPL10;;ENSG00000165496|ENST00000298283|RPL10L 4.102521498998006 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4398 21.196 367.0 224590.0 25 0 19774.0 + 31970 RVFDKDGNGY 10 103 585.78122166488 1169.54789039656 2 585.7811157107353 MULTI CID FTMS 0 0 0 4395 204267.3125 0.7583986752816981 -4 0.0604076385498046 3 Unmodified _RVFDKDGNGY_ ENSG00000143933|ENST00000272298|CALM2;ENSG00000160014|ENST00000291295|CALM3;ENSG00000198668|ENST00000356978|CALM1;ENST00000482532.5_1_2:47387917-47389823:-|nuORF 57.24910588100465 0.0438022649904578 5 [RV]{M(Oxidation (M))|F}DKDGN 8 2 73.766 0.0 0.0 6.3072 0.0 0.0 0.0 235.07443323056933 235.07443323056933 55.80706579873059 0.0 0.0 0.0 0 1.305462187404089 1.2218487496163564 0.4247425010840047 0.7614393726401688 + [RV]{M(Oxidation (M))|F}DKDGN 6.3072 + + 230 1 2.979 65744.2 1.0 802 3594 4395 SUDHL4_400M_050219_1,4398 SUDHL4_400M_050219_1,4398,RVFDKDGNGY True True RVFDKDGNGY 21.196479 585.781115710735 1277065.25 4395.0 ENSG00000160014|ENST00000291295|CALM3;;ENSG00000198668|ENST00000356978|CALM1;;ENSG00000143933|ENST00000272298|CALM2;;ENST00000482532.5_1_2:47387917-47389823:-|nuORF 9.551124413808187 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4401 21.214 610.0 204820.0 25 0 38831.0 + 17685 KPTGARPSAL 10 108 499.2933038868565 996.572054840513 2 499.2929870486259 MULTI CID FTMS 0 0 0 4400 90612.2578125 0.0398977495660715 27 -0.3490619659423828 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 27.22323531849824 0.3570408936368626 5 KPTG 4 6 50.433 0.0 0.0 5.0607 0.0 0.0 0.0 610.3347872369749 610.3347872369749 38.21456278567766 0.0 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 + KPTG 5.0607 + + 114 + 1 2.979 98591.0 1.0 803 3596 4400 SUDHL4_400M_050219_1,4401 SUDHL4_400M_050219_1,4401,KPTGARPSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4402 21.228 800.0 150700.0 25 0 9724.0 + 38282 TQAYGQQSY 9 136 523.2329705381829 1044.4513881431658 2 523.2330810427666 MULTI CID FTMS 0 0 0 4400 118042.7109375 0.3769593847486482 -6 0.0789337158203125 2 Unmodified _TQAYGQQSY_ ENSG00000182944|ENST00000397938|EWSR1;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;nc|ENSG00000182944|Q01844-2|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1 38.61474834105838 0.0830609365873449 5 [AG]TAYGQQ{[{M(Oxidation (M))|F}C]|[YS]} 10 3 + 45.633 0.0 0.0 4.3691 4.3691 78.793 0.0 0.0 0.0 2.7832624926385634 5.764837301042711 2.7832624926385634 2.7832624926385634 0 0.6861818737241735 1.5228787452803376 0.6989700043360187 0.0 [AG]TAYGQQ{[{M(Oxidation (M))|F}C]|[YS]};[QT]AYGQQ{[{M(Oxidation (M))|F}C]|[YS]};[AG]TAYG[AG]Q{[{M(Oxidation (M))|F}C]|[YS]};[AG]TAYGQ[AG]{[{M(Oxidation (M))|F}C]|[YS]};[QT]AYG[AG]Q{[{M(Oxidation (M))|F}C]|[YS]};[QT]AYGQ[AG]{[{M(Oxidation (M))|F}C]|[YS]};AASAYGQQ{[{M(Oxidation (M))|F}C]|[YS]};[AG]SY[RN]Q{[{M(Oxidation (M))|F}C]|[YS]};[AG]GYATQQ{[{M(Oxidation (M))|F}C]|[YS]};[AG]QYTQQ{[{M(Oxidation (M))|F}C]|[YS]} 4.3691;4.1026;3.4916;3.4916;3.221;3.221;3.088;3.0724;2.9767;2.9383 -;+;-;-;-;-;-;-;-;- + 1237 1 2.979 94614.9 0.5699999928474426 804 3596 4400 SUDHL4_400M_050219_1,4402 SUDHL4_400M_050219_1,4402,TQAYGQQSY True True TQAYGQQSY 21.227533 523.233081042767 1340744.25 4400.0 nc|ENSG00000182944|Q01844-6|EWSR1;;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;;nc|ENSG00000182944|Q01844-5|EWSR1;;nc|ENSG00000182944|Q01844-4|EWSR1;;nc|ENSG00000182944|Q01844-3|EWSR1;;nc|ENSG00000182944|Q01844-2|EWSR1;;ENSG00000182944|ENST00000397938|EWSR1 6.424330870310466 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4404 21.245 800.0 111270.0 25 0 5487.1 + -1 GVASCAEAYM 10 126 537.7149202907902 1073.4152876483804 2 537.7145873904228 MULTI CID FTMS 0 0 0 4403 96683.75 0.964943421604078 2 -0.032928466796875 1 Carbamidomethyl (C),Oxidation (M) _GVASC(Carbamidomethyl (C))AEAYM(Oxidation (M))_ REV__ENSG00000205592|ENST00000454784|MUC19;REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19 20.453626601364224 0.5043500229302764 5 {[QV]|[N{I|L}]|[RA]|[KV]}S[PA]NS 7 -1 33.549 0.0 0.0 3.1254 0.0 0.0 0.0 387.0803011529906 387.0803011529906 14.084938383626522 0.0 0.0 0.0 0 0.8807196863200843 0.7958800173440752 0.3807196863200844 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}S[PA]NS 3.1254 - 244 + 1 2.987 77208.3 0.4799999892711639 805 3597 4403 SUDHL4_400M_050219_1,4404 SUDHL4_400M_050219_1,4404,GVASCAEAYM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4405 21.25 279.0 285770.0 25 0 34580.0 + 18527 KYQPPPPP 8 90 462.2528682231493 922.4911835130986 2 462.2532531619072 MULTI CID FTMS 0 0 0 4403 209558.796875 0.903166721987616 -4 0.0495738983154296 2 Unmodified _KYQPPPPP_ ENSG00000131149|ENST00000253458|GSE1;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1 34.18733598223924 0.3315367612694167 5 {[HG]|PP}[QP]PPPPP 9 3 {[HG]|PP}[QP]P + + 23.392 -5.9079 -1.1443 2.5357 2.5357 53.476 0.0 0.0 0.0 0.0 16.151428148349645 0.0 0.0 0 1.0 0.0 0.0 0.0 {[HG]|PP}[QP]PPPPP 2.5357 - 54 + 1 2.987 68477.9 1.0 806 3597 4403 SUDHL4_400M_050219_1,4405 SUDHL4_400M_050219_1,4405,KYQPPPPP False True KYQPPPPP 21.250375 462.253253161907 13829262.0 4403.0 ENSG00000131149|ENST00000253458|GSE1;;nc|ENSG00000131149|Q14687-3|GSE1;;nc|ENSG00000131149|Q14687-2|GSE1 0.6917877395947775 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4406 21.256 334.0 207880.0 25 0 25316.0 + 40312 VGWPGRVY 8 92 467.2521038566424 0 467.2531310915947 PEAK CID FTMS 0 0 0 4403 118766.78125 0.6977631039755127 -6 0.089569091796875 3 Unmodified _VGWPGRVY_ REV__ENST00000358157.2_1_9:91616444-91616663:+|nuORF 2.889219685676258 0.5898224805723975 5 C(Carbamidomethyl (C)) 1 -1 3.9794 0.0 0.0 0.42675 0.0 0.0 465.25575082676295 304.1912630670532 769.4470138938161 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.42675 - 4 + 1 2.987 59623.6 1.0 807 3597 4403 SUDHL4_400M_050219_1,4406 SUDHL4_400M_050219_1,4406,VGWPGRVY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4409 21.272 523.0 234860.0 25 0 41169.0 5097 DHNDGLGNAF 10 125 530.2281883276004 1058.441823722001 2 530.2275878787041 MULTI CID FTMS 0 0 0 4408 112852.3671875 0.1079341777319892 -16 0.2165794372558593 1 Unmodified _DHNDGLGNAF_ ENSG00000271447|ENST00000605424|MMP28 11.494710602746466 0.654671931888957 5 [HD]EAQQNA{M(Oxidation (M))|F} 9 5 + 70.473 0.0 0.0 6.6581 6.6581 91.693 0.0 0.0 0.0 14.137342758552691 47.53567058712731 14.137342758552691 9.208187539523747 0 0.7742275032520141 0.6989700043360187 0.2887254899964357 0.0 [HD]EAQQNA{M(Oxidation (M))|F};[HD]EA[AG]QNA{M(Oxidation (M))|F};[HD]EAQ[AG]NA{M(Oxidation (M))|F};[HD]EAQQGGA{M(Oxidation (M))|F};[HD]EA[AG][AG]NA{M(Oxidation (M))|F};[HD]EA[AG]QGGA{M(Oxidation (M))|F};[HD]EAQ[AG]GGA{M(Oxidation (M))|F};{[WT]|[RM]}{M(Oxidation (M))|F}HHNA{M(Oxidation (M))|F};{[ET]|[MV]}{[CT]|[{M(Oxidation (M))|F}G]}HHNA{M(Oxidation (M))|F};{[WT]|[RM]}{M(Oxidation (M))|F}HHGGA{M(Oxidation (M))|F} 6.6581;5.7882;5.7882;5.7882;4.9223;4.9223;4.9223;2.2943;1.4581;1.4192 -;-;-;-;-;-;-;-;-;- 271 1 2.987 97193.9 1.0 808 3599 4408 SUDHL4_400M_050219_1,4409 SUDHL4_400M_050219_1,4409,DHNDGLGNAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4410 21.284 694.0 143490.0 25 0 30623.0 + 50 AAAWCRPWWR 10 108 434.88235229470814 0 434.8820068240166 PEAK CID FTMS 0 0 0 4408 107195.7109375 0.8708485775695602 -24 0.3429718017578125 2 Unmodified _AAAWCRPWWR_ REV__ENST00000298743.8_1_9:89561621-89561816:-|nuORF 3.944395688203298 0.3961065659209837 5 P 1 -1 6.9897 0.0 0.0 0.8055 0.0 0.0 213.372397718027 554.3026217096311 767.6750194276581 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.8055 + + 17 + 1 2.987 84140.7 1.0 809 3599 4408 SUDHL4_400M_050219_1,4410 SUDHL4_400M_050219_1,4410,AAAWCRPWWR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4411 21.298 800.0 46423.0 25 0 13029.0 -1 0 27 1182.4784340733397 3544.41347282022 3 1182.811328113079 MULTI CID FTMS 0 0 0 4408 92316.875 0.8377387089467403 -1 0.004037857055664 3 5 E 1 -1 6.9897 0.0 0.0 0.1972 0.0 0.0 2888.1851828256854 524.1620577447874 3412.347240570473 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.1972 - 4 + 1 2.987 39787.8 0.3799999952316284 810 3599 4408 SUDHL4_400M_050219_1,4411 SUDHL4_400M_050219_1,4411, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4413 21.315 800.0 125250.0 25 0 31088.0 -1 0 49 1155.451507652794 3463.332693558583 3 1155.784594714642 MULTI CID FTMS 0 0 0 4412 239253.140625 0.4625790206129538 8 -0.0776958465576171 1 5 CT 2 -1 9.6927 0.0 0.0 0.27987 0.0 0.0 2367.849369439245 888.3849581354124 3256.234327574658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 CT 0.27987 - 83 + 1 2.987 93023.7 0.7400000095367432 811 3600 4412 SUDHL4_400M_050219_1,4413 SUDHL4_400M_050219_1,4413, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4414 21.319 252.0 291750.0 25 0 39450.0 -1 0 87 505.2317920144947 504.2245155478947 1 505.2310363650322 MULTI CID FTMS 0 0 0 4412 109886.9921875 0.6224132555307268 -30 0.5408401489257812 2 5 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 2.4739 0.0 0.0 339.1452594217213 0.0 339.1452594217213 0.0 9.006375246153908 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.4739 - 12 + 1 2.987 61279.3 1.0 812 3600 4412 SUDHL4_400M_050219_1,4414 SUDHL4_400M_050219_1,4414, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4418 21.333 145.0 465370.0 25 0 131670.0 -1 0 75 472.2730624742763 471.2657860076763 1 472.2727538943291 MULTI CID FTMS 0 0 0 4417 213531.609375 0.7381010171583083 -43 0.6713008880615234 1 5 [VG]D 3 -1 16.478 0.0 0.0 3.4966 0.0 0.0 0.0 197.1262650938669 197.1262650938669 12.983324797206285 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [VG]D 3.4966 - 16 1 2.987 57211.5 1.0 813 3603 4417 SUDHL4_400M_050219_1,4418 SUDHL4_400M_050219_1,4418, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4419 21.346 800.0 135070.0 25 0 28770.0 + 6368 DVTLTREYV 9 113 548.2886651018514 1094.5627772705027 2 548.2882568240166 MULTI CID FTMS 0 0 0 4417 80515.828125 0.8562023211116147 3 -0.0406513214111328 2 Unmodified _DVTLTREYV_ REV__ENSG00000088320|ENST00000201979|REM1 7.910154910731844 0.6385446671287552 5 Y 1 -1 12.474 0.0 0.0 1.1397 0.0 0.0 913.4888617205012 0.0 913.4888617205012 0.0 2.2931892451282465 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1397 + + 63 + 1 2.987 89728.8 0.5600000023841858 814 3603 4417 SUDHL4_400M_050219_1,4419 SUDHL4_400M_050219_1,4419,DVTLTREYV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4420 21.35 160.0 444860.0 25 0 105820.0 + 40000 VGDPGQRTL 9 78 471.7540616247854 941.4935703163708 2 471.7540161013603 MULTI CID FTMS 0 0 0 4417 234742.515625 0.6686620200058447 -10 0.1491622924804687 3 Unmodified _VGDPGQRTL_ ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A 19.361941925380144 0.3125782356748823 5 VGDPGQ 6 3 48.633 0.0 0.0 5.1655 0.0 0.0 0.0 385.2200106256469 385.2200106256469 39.16895006820745 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + VGDPGQ 5.1655 + + 117 + 1 2.987 61134.3 1.0 815 3603 4417 SUDHL4_400M_050219_1,4420 SUDHL4_400M_050219_1,4420,VGDPGQRTL False True VGDPGQRTL 21.349539 471.75401610136 1606179.0 4417.0 nc|ENSG00000117713|O14497-3|ARID1A;;ENSG00000117713|ENST00000324856|ARID1A;;nc|ENSG00000117713|O14497-2|ARID1A 4.870806296666463 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4421 21.355 322.0 142570.0 25 0 12307.0 + 32537 SAMSNPRAM 9 76 482.7204788727607 963.4264048123214 2 482.7207519412041 MULTI CID FTMS 0 0 0 4417 101680.8046875 0.7558260393873085 -10 0.1491622924804687 4 Unmodified _SAMSNPRAM_ ENSG00000135018|ENST00000376395|UBQLN1;ENSG00000188021|ENST00000338222|UBQLN2;nc|ENSG00000135018|Q9UMX0-2|UBQLN1;nc|ENSG00000135018|Q9UMX0-3|UBQLN1 13.042465956692816 0.4836390050082244 5 {[SA]|[TG]}MSN 5 4 41.07 0.0 0.0 4.2629 0.0 0.0 0.0 470.2190035455688 470.2190035455688 28.85151878060192 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + {[SA]|[TG]}MSN 4.2629 + + 43 + 1 2.987 42437.2 1.0 816 3603 4417 SUDHL4_400M_050219_1,4421 SUDHL4_400M_050219_1,4421,SAMSNPRAM False True SAMSNPRAM 21.355406 482.720751941204 653466.25 4417.0 nc|ENSG00000135018|Q9UMX0-2|UBQLN1;;nc|ENSG00000135018|Q9UMX0-3|UBQLN1;;ENSG00000188021|ENST00000338222|UBQLN2;;ENSG00000135018|ENST00000376395|UBQLN1 1.183855543533961 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4423 21.36 95.0 586410.0 25 0 110190.0 28168 PPSPPPPPP 9 76 441.740137657774 881.465722382348 2 441.7396423220634 MULTI CID FTMS 0 0 0 4422 536781.25 0.7997415796900558 2 -0.0123729705810546 1 Unmodified _PPSPPPPPP_ ENSG00000100312|ENST00000216139|ACR;ENSG00000163092|ENST00000409195|XIRP2;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000230859.7_2_5:6713434-6713641:+|nuORF;ENST00000395348.7_1_10:61444064-61469743:-|nuORF;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2;REV__ENSG00000110786|ENST00000358540|PTPN5;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENST00000430014.1_1:144520944-144521145:-|nuORF;REV__nc|ENSG00000110786|P54829-2|PTPN5;REV__nc|ENSG00000110786|P54829-3|PTPN5 98.80718514221952 0.0113971232682052 5 [PS]PPPP[YK] 8 3 + 71.304 0.0 0.0 8.0892 8.0892 97.188 0.0 0.0 0.0 20.66946789630613 58.11629054940951 20.66946789630613 22.21848749616356 0 1.305462187404089 2.0 1.4604093769761874 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[PS][YK]P[YK];[PS]P[YK][YK];{[NV]|[RG]}[YV]P[YK];{[HG]|PP}S[YK][YK] 8.0892;5.5686;5.0591;3.9196;1.4204;1.3989 -;-;-;-;-;- 120 1 2.987 49408.8 1.0 817 3604 4422 SUDHL4_400M_050219_1,4423 SUDHL4_400M_050219_1,4423,PPSPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4424 21.364 164.0 400140.0 25 0 48452.0 + 34153 SLLYDSIVP 9 88 503.77469910925134 0 503.7746154665947 PEAK CID FTMS 0 0 0 4422 225328.90625 0.8122186869689282 -1 0.0282783508300781 2 Unmodified _SLLYDSIVP_ REV__ENSG00000197386|ENST00000355072|HTT 28.486842064014134 0.1241350795510704 5 T{I|L}DT 4 -1 25.918 0.0 0.0 2.5775 0.0 0.0 99.0717189676371 473.2360018365844 572.3077208042215 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 T{I|L}DT 2.5775 - 90 + 1 2.987 55193.4 1.0 818 3604 4422 SUDHL4_400M_050219_1,4424 SUDHL4_400M_050219_1,4424,SLLYDSIVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4432 21.393 132.0 403950.0 25 0 85788.0 28468 PTGARSPAL 9 84 435.2458994789768 868.4772460247536 2 435.2457153201103 MULTI CID FTMS 0 0 0 4431 300762.71875 0.0992201506367058 -12 0.1272850036621093 1 Unmodified _PTGARSPAL_ ENST00000546571.5_1_12:109124172-109124316:-|nuORF 18.1463463914782 0.3454829746528889 5 PT 2 7 44.776 0.0 0.0 5.1557 0.0 0.0 0.0 667.3535280000012 667.3535280000012 22.980690886789503 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + PT 5.1557 + + 39 + 1 2.987 48511.1 1.0 819 3611 4431 SUDHL4_400M_050219_1,4432 SUDHL4_400M_050219_1,4432,PTGARSPAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4433 21.4 368.0 179910.0 25 0 13213.0 + 38355 TQMTITTQK 9 102 526.2762403156436 1050.537927698087 2 526.2761108279228 MULTI CID FTMS 0 0 0 4431 166468.625 0.8098025863384057 -6 0.0240058898925781 2 Unmodified _TQMTITTQK_ ENSG00000181143|ENST00000397910|MUC16 37.07464296494664 0.0915153923251136 5 [QT]MT{I|L}TTQK 9 0 [QT] + + 43.524 21.734 9.4864 4.143 4.143 56.582 0.0 0.0 0.0 0.0 22.554434879763026 0.0 0.0 0 0.7887254899964358 0.0 0.4247425010840047 0.4604093769761875 + + [QT]MT{I|L}TTQK 4.143 + + 214 + 1 2.987 55934.3 1.0 820 3611 4431 SUDHL4_400M_050219_1,4433 SUDHL4_400M_050219_1,4433,TQMTITTQK True True TQMTITTQK 21.399605 526.276110827923 792377.625 4431.0 ENSG00000181143|ENST00000397910|MUC16 6.7002943356831866 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4434 21.404 247.0 500400.0 25 0 101860.0 + 32382 RYRPGTVALR 10 106 396.9036392460048 1187.6890883382143 3 396.9035217165947 MULTI CID FTMS 0 0 0 4431 238004.546875 0.1193325411617327 -10 0.0685081481933593 3 Unmodified _RYRPGTVALR_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7 28.270515756011903 0.3335101494214266 5 R[YR]PGTVA{I|L}R 10 0 + 81.31 0.0 0.0 6.8461 6.8461 94.835 0.0 0.0 0.0 68.12235206668652 23.279550148593486 23.279550148593486 19.286414285514567 0 1.5189301784845295 0.0 0.4247425010840047 0.6747425010840047 + + R[YR]PGTVA{I|L}R;{[DS]|[MA]|[CV]|TT}{I|L}A[VS]GTVA{I|L}R 6.8461;5.2222 +;- + 316 + 1 2.987 104821.2 1.0 821 3611 4431 SUDHL4_400M_050219_1,4434 SUDHL4_400M_050219_1,4434,RYRPGTVALR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4437 21.417 352.0 91941.0 25 0 3173.1 -1 0 61 948.4066356468036 2842.198077540611 3 948.7401000857352 MULTI CID FTMS 0 0 0 4436 293282.03125 0.5479647411756601 12 -0.1518096923828125 1 5 [KQ]E 3 -1 10.942 0.0 0.0 0.38499 0.0 0.0 0.0 2453.9799433455514 2453.9799433455514 2.983324797206281 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 [KQ]E 0.38499 - 22 1 2.987 28077.8 1.0 822 3613 4436 SUDHL4_400M_050219_1,4437 SUDHL4_400M_050219_1,4437, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4438 21.431 800.0 232430.0 25 0 19812.0 -1 0 77 624.7868010535902 2495.1180983479608 4 625.0372192263603 MULTI CID FTMS 0 0 0 4436 125711.6328125 0.0349649688195297 -29 0.3602523803710937 2 5 DDRENVP 7 -1 46.458 0.0 0.0 1.862 0.0 0.0 1651.7526426811291 0.0 1651.7526426811291 0.0 37.60676356474015 0.0 0.0 0 1.424742501084005 0.0 0.3494850021680094 0.0 DDRENVP 1.862 - 186 + 1 2.987 143636.9 0.6499999761581421 823 3613 4436 SUDHL4_400M_050219_1,4438 SUDHL4_400M_050219_1,4438, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4441 21.451 800.0 156810.0 25 0 12805.0 + 31214 RLQEVTHSV 9 131 534.7932709225602 1067.5719889119202 2 534.7940551638603 MULTI CID FTMS 0 0 0 4440 85565.9453125 0.0871486963614688 16 -0.18646240234375 1 Unmodified _RLQEVTHSV_ ENSG00000139626|ENST00000267082|ITGB7;ENST00000549462.1_1_12:53591166-53600997:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7 29.84058131909904 0.1515068451768857 5 VTHSV 5 4 47.206 0.0 0.0 4.4218 0.0 0.0 526.2859974591812 0.0 526.2859974591812 0.0 33.57332496431269 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 + VTHSV 4.4218 + + 360 1 2.987 98147.0 0.6700000166893005 824 3615 4440 SUDHL4_400M_050219_1,4441 SUDHL4_400M_050219_1,4441,RLQEVTHSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4444 21.471 800.0 178930.0 25 0 30668.0 + -1 GVLRARMTIR 10 104 594.8520387706498 1187.6895246080994 2 595.3526489138603 MULTI CID FTMS 0 0 0 4443 75100.9375 0.4674979474758062 -5 0.050912857055664 1 Oxidation (M) _GVLRARM(Oxidation (M))TIR_ REV__ENST00000555562.1_1_14:89883856-89885534:+|nuORF 8.745405648335112 0.6861838735306406 5 R 1 -1 22.833 0.0 0.0 1.9225 0.0 0.0 1013.5774315678636 0.0 1013.5774315678636 0.0 12.236873425560209 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.1595680409956017 R 1.9225 + + 32 + 1 2.987 110970.3 0.6100000143051147 825 3617 4443 SUDHL4_400M_050219_1,4444 SUDHL4_400M_050219_1,4444,GVLRARMTIR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4445 21.477 317.0 158500.0 25 0 20554.0 -1 0 74 578.2850266791255 577.2777502125255 1 578.2852050662041 MULTI CID FTMS 0 0 0 4443 205889.328125 0.7654596876658497 -4 0.046915054321289 2 5 E{M(Oxidation (M))|F}[PS] 4 -1 18.94 0.0 0.0 3.2809 0.0 0.0 99.10537917304843 0.0 99.10537917304843 0.0 5.268024924119672 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 E{M(Oxidation (M))|F}[PS] 3.2809 - 36 1 2.987 43282.5 1.0 826 3617 4443 SUDHL4_400M_050219_1,4445 SUDHL4_400M_050219_1,4445, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4447 21.495 800.0 157060.0 25 0 12494.0 -1 0 62 832.7131794260767 2495.11770887843 3 833.0488159060478 MULTI CID FTMS 0 0 0 4446 96169.0859375 0.1408771685756477 -25 0.2992210388183594 1 5 DD 2 -1 12.959 0.0 0.0 0.51937 0.0 0.0 1651.7507343170707 610.2918795221311 2262.0426138392017 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 DD 0.51937 - 22 + 1 2.972 93329.1 0.4900000095367431 827 3618 4446 SUDHL4_400M_050219_1,4447 SUDHL4_400M_050219_1,4447, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4450 21.505 211.0 406180.0 25 0 86817.0 + 1066 AGHLSTAQY 9 102 474.2332763898808 946.4519998465616 2 474.2341491580009 MULTI CID FTMS 0 0 0 4449 225833.828125 0.3918747674378376 -6 0.067789077758789 1 Unmodified _AGHLSTAQY_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 38.15118350030904 0.0856056900103839 5 [AG]H{I|L}STAQY 9 0 + 41.308 0.0 0.0 4.3645 4.3645 83.36 0.0 0.0 0.0 8.28273546346768 11.082720884511795 8.28273546346768 8.28273546346768 0 0.3935078169319297 1.5228787452803376 0.9247425010840048 0.0 + + [AG]H{I|L}STAQY;[HQ]{I|L}STAQY;[DP][RP]TAQY 4.3645;3.4894;1.1902 +;-;- + 141 1 2.972 72779.6 1.0 828 3620 4449 SUDHL4_400M_050219_1,4450 SUDHL4_400M_050219_1,4450,AGHLSTAQY True True AGHLSTAQY 21.505288 474.2339 5223834.0 4449.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 6.250596841176351 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4451 21.519 800.0 254720.0 25 0 26325.0 28154 PPQPPPPPP 9 160 462.2528682231493 922.4911835130986 2 462.2527038455009 MULTI CID FTMS 0 0 0 4449 173934.46875 0.7496312554003584 19 -0.2089691162109375 2 Unmodified _PPQPPPPPP_ ENSG00000077044|ENST00000264057|DGKD;ENSG00000128652|ENST00000683222|HOXD3;ENSG00000131061|ENST00000375200|ZNF341;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000148143|ENST00000277225|ZNF462;ENSG00000165556|ENST00000381020|CDX2;ENSG00000181240|ENST00000321510|SLC25A41;ENSG00000183654|ENST00000332432|MARCHF11;ENSG00000196814|ENST00000361171|MVB12B;ENSG00000198914|ENST00000361360|POU3F3;ENSG00000204612|ENST00000376708|FOXB2;ENSG00000242265|ENST00000612748|PEG10;ENST00000372441.1_1_6:43477335-43478064:-|nuORF;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;ENST00000519758.5_1_X:47078159-47081683:+|nuORF;ENST00000522234.5_1_X:47078210-47085639:+|nuORF;nc|ENSG00000131061|Q9BYN7-2|ZNF341;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000148143|Q96JM2-3|ZNF462;nc|ENSG00000168066|Q15637-5|SF1;nc|ENSG00000181240|Q8N5S1-2|SLC25A41;nc|ENSG00000196814|Q9H7P6-2|MVB12B;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10;nc|ENSG00000288658|A0A7I2V3R4|RNF228;REV__ENSG00000100207|ENST00000677622|TCF20;REV__ENSG00000117523|ENST00000647382|PRRC2C;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000165556|ENST00000381020|CDX2;REV__ENSG00000187961|ENST00000338591|KLHL17;REV__nc|ENSG00000100207|Q9UGU0-2|TCF20;REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-3|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-4|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-5|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-6|PRRC2C;REV__nc|ENSG00000117523|Q9Y520|PRRC2C;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341 53.57557251787612 0.0325303259649373 5 [YK]QPPKY 7 6 + 34.131 0.0 0.0 3.6998 3.6998 78.907 0.0 0.0 0.0 5.158715643802765 5.124064104711223 5.124064104711223 4.387568628841265 0 0.9728361973694876 0.9208187539523752 0.0 0.5228787452803376 [YK]QPPKY;[YK]PQPKY;{[HG]|PP}QPPPKY;[YK][AG]PPKY;{[HG]|PP}PQPPKY;[YK]P[AG]PKY;{[HG]|PP}PPQPKY;{[MS]|[{M(Oxidation (M))|F}A]}{[VA]|[{I|L}G]}QPKY;{[HG]|PP}[AG]PPPKY;{[HG]|PP}P[AG]PPKY 3.6998;3.2242;3.1406;2.6884;2.4804;2.2128;2.0048;1.4683;1.2172;0.90954 -;-;-;-;-;-;-;-;-;- 201 1 2.972 157103.2 0.800000011920929 829 3620 4449 SUDHL4_400M_050219_1,4451 SUDHL4_400M_050219_1,4451,PPQPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4452 21.523 192.0 898300.0 25 0 90815.0 -1 0 62 500.0307171518899 2495.1172034264496 5 500.2311584353447 MULTI CID FTMS 0 0 0 4449 454370.75 0.1748598198008205 -20 0.2006034851074218 3 5 N 1 -1 12.742 0.0 0.0 0.51069 0.0 0.0 843.3640793397698 1534.6487122437256 2378.0127915834955 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 N 0.51069 - 24 + 1 2.972 136953.5 1.0 830 3620 4449 SUDHL4_400M_050219_1,4452 SUDHL4_400M_050219_1,4452, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4454 21.527 70.0 667620.0 25 0 38034.0 5098 DHNDGLGNAF 10 76 530.2281883276004 1058.441823722001 2 530.2285644412041 MULTI CID FTMS 0 0 0 4453 671334.9375 0.6420776654284026 6 -0.0685176849365234 1 Unmodified _DHNDGLGNAF_ ENSG00000271447|ENST00000605424|MMP28 16.149105407346934 0.5765757077271437 5 [HD]EAQQNA{M(Oxidation (M))|F} 9 5 + 63.338 0.0 0.0 5.9841 5.9841 89.995 0.0 0.0 0.0 7.147642715192504 44.82615565263082 7.147642715192504 9.208187539523747 0 0.9247425010840048 0.0 0.0 0.4247425010840047 [HD]EAQQNA{M(Oxidation (M))|F};[HD]EA[AG]QNA{M(Oxidation (M))|F};[HD]EAQ[AG]NA{M(Oxidation (M))|F};[HD]EAQQGGA{M(Oxidation (M))|F};[HD]EA[AG][AG]NA{M(Oxidation (M))|F};[HD]EA[AG]QGGA{M(Oxidation (M))|F};[HD]EAQ[AG]GGA{M(Oxidation (M))|F} 5.9841;5.1141;5.1141;5.1141;4.2482;4.2482;4.2482 -;-;-;-;-;-;- 161 1 2.972 38725.0 1.0 831 3621 4453 SUDHL4_400M_050219_1,4454 SUDHL4_400M_050219_1,4454,DHNDGLGNAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4455 21.533 305.0 256310.0 25 0 37666.0 + 39565 VCHKAFKT 8 96 467.2521038566424 0 467.2513000369072 PEAK CID FTMS 0 0 0 4453 144025.0625 0.8461572638625938 18 -0.1851024627685547 2 Unmodified _VCHKAFKT_ REV__ENSG00000022267|ENST00000370683|FHL1;REV__nc|ENSG00000022267|Q13642-1|FHL1;REV__nc|ENSG00000022267|Q13642-3|FHL1;REV__nc|ENSG00000022267|Q13642-4|FHL1;REV__nc|ENSG00000022267|Q13642|FHL1 5.760428011301431 0.5786759180849727 5 W 1 -1 4.6041 0.0 0.0 0.49374 0.0 0.0 465.252576998638 278.14072595767817 743.3933029563161 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.49374 - 3 + 1 2.972 65344.5 1.0 832 3621 4453 SUDHL4_400M_050219_1,4455 SUDHL4_400M_050219_1,4455,VCHKAFKT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4456 21.546 746.0 156010.0 25 0 16563.0 23135 LSPRRRRWRR 10 99 480.2959652548268 1437.8660663646804 3 480.6299011111259 MULTI CID FTMS 0 0 0 4453 77583.6640625 1.0 0 0.0 3 Unmodified _LSPRRRRWRR_ ENST00000375344.7_1_9:97136898-97137102:+|nuORF 1.4551175022131473 0.7199057217081983 5 N{I|L} 2 10 17.959 0.0 0.0 1.249 0.0 0.0 1192.7292848249415 0.0 1192.7292848249415 0.0 3.3547064036788754 0.0 0.0 0 0.0 0.0 0.0 0.0 N{I|L} 1.249 - 110 1 2.972 94667.4 1.0 833 3621 4453 SUDHL4_400M_050219_1,4456 SUDHL4_400M_050219_1,4456,LSPRRRRWRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4459 21.556 137.0 391960.0 25 0 42849.0 + 39230 VAAAESHPL 9 77 447.73770499947386 893.4608570657477 2 447.7375366091728 MULTI CID FTMS 0 0 0 4458 229689.21875 0.0770821634760552 -18 0.1858272552490234 1 Unmodified _VAAAESHPL_ ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 30.22481116460888 0.1466181017706357 5 {[VA]|[{I|L}G]}AA{[ES]|[DT]|[{I|L}C]}H[{I|L}P] 9 0 + 42.157 0.0 0.0 4.7184 4.7184 89.819 0.0 0.0 0.0 36.21523434085148 0.915149811213496 0.915149811213496 42.15735931149851 0 0.805462187404089 1.6989700043360187 0.0 0.0 + + {[VA]|[{I|L}G]}AA{[ES]|[DT]|[{I|L}C]}H[{I|L}P] 4.7184 + + 69 + 1 2.954 51926.9 1.0 834 3623 4458 SUDHL4_400M_050219_1,4459 SUDHL4_400M_050219_1,4459,VAAAESHPL False True VAAAESHPL 21.556206 447.737536609173 47668926.0 4458.0 ENST00000416120.1_1_6:64259201-64259360:-|nuORF;;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 5.653501510620117 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4462 21.565 137.0 570690.0 25 0 78058.0 28115 PPPAPPPPP 9 92 433.74224106244367 865.4699291916874 2 433.7424499392509 MULTI CID FTMS 0 0 0 4461 357753.6875 0.5326272713890355 -24 0.2407741546630859 1 Unmodified _PPPAPPPPP_ ENSG00000038219|ENST00000040738|BOD1L1;ENSG00000105429|ENST00000251268|MEGF8;ENSG00000115935|ENST00000679041|WIPF1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000158195|ENST00000618852|WASF2;ENSG00000162105|ENST00000601538|SHANK2;ENSG00000184937|ENST00000452863|WT1;ENSG00000271601|ENST00000604000|LIX1L;ENSG00000272333|ENST00000420124|KMT2B;ENST00000302913.8_1_7:100488489-100488690:-|nuORF;ENST00000480400.1_1_2:175446032-175450310:-|nuORF;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;nc|ENSG00000115935|O43516-2|WIPF1;nc|ENSG00000115935|O43516-3|WIPF1;nc|ENSG00000115935|O43516-4|WIPF1;nc|ENSG00000162105|Q9UPX8-1|SHANK2;nc|ENSG00000162105|Q9UPX8-4|SHANK2;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000272333|ENST00000420124|KMT2B;REV__ENSG00000274588|ENST00000611977|DGKK;REV__ENST00000356709.8_1_6:26383333-26385267:+|nuORF;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000467485.5_1_6:26383333-26388250:+|nuORF;REV__ENST00000469230.5_1_6:26383472-26385267:+|nuORF;REV__ENST00000471116.5_1_6:26383460-26385455:+|nuORF;REV__ENST00000472507.5_1_6:26383460-26388250:+|nuORF;REV__ENST00000482536.5_1_6:26384030-26390413:+|nuORF;REV__ENST00000493275.5_1_6:26383438-26385267:+|nuORF 56.04830969593885 0.0282699710924866 5 [PA]PPPP[YK] 8 4 + 48.822 0.0 0.0 5.6411 5.6411 91.244 0.0 0.0 0.0 15.617968113107068 6.989700043360188 6.989700043360188 15.617968113107068 0 1.1989700043360187 1.6989700043360187 0.0 0.0 [PA]PPPP[YK];[YK]APP[YK];{[HG]|PP}PAPP[YK];[PA][YK]P[YK];{[HG]|PP}APPP[YK];[YK]PAP[YK];{[HG]|PP}PPAP[YK];[PA]P[YK][YK];{[NV]|[RG]}[{M(Oxidation (M))|F}V]P[YK];{[HG]|PP}A[YK][YK] 5.6411;3.8366;3.7696;3.6936;3.5661;2.3024;2.2353;2.1873;1.2708;0.11223 -;-;-;-;-;-;-;-;-;- 100 1 2.954 65092.7 1.0 835 3625 4461 SUDHL4_400M_050219_1,4462 SUDHL4_400M_050219_1,4462,PPPAPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4463 21.573 455.0 205300.0 25 0 29047.0 16159 ITYNAPAA 8 125 410.7119860732873 819.4094192133746 2 410.7121459841728 MULTI CID FTMS 0 0 0 4461 89797.890625 0.333210359402763 -13 0.1558074951171875 2 Unmodified _ITYNAPAA_ ENSG00000164880|ENST00000404767|INTS1 18.13498045792455 0.6430038125133779 5 {I|L}TAP 4 4 46.983 0.0 0.0 5.7337 0.0 0.0 0.0 434.1664217584594 434.1664217584594 35.38872836444014 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {I|L}TAP 5.7337 - 143 + 1 2.954 75433.0 1.0 836 3625 4461 SUDHL4_400M_050219_1,4463 SUDHL4_400M_050219_1,4463,ITYNAPAA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4464 21.587 800.0 318360.0 25 0 45969.0 -1 STSWMEVNFA 10 140 594.2578331277907 1186.5011133223811 2 594.2574951052666 MULTI CID FTMS 0 0 0 4461 205996.625 0.4122120573126723 -11 0.1290607452392578 3 Oxidation (M) _STSWM(Oxidation (M))EVNFA_ ENSG00000164509|ENST00000652347|IL31RA;nc|ENSG00000164509|Q8NI17-10|IL31RA;nc|ENSG00000164509|Q8NI17-11|IL31RA;nc|ENSG00000164509|Q8NI17-12|IL31RA;nc|ENSG00000164509|Q8NI17-3|IL31RA;nc|ENSG00000164509|Q8NI17-4|IL31RA;nc|ENSG00000164509|Q8NI17-5|IL31RA;nc|ENSG00000164509|Q8NI17-6|IL31RA;nc|ENSG00000164509|Q8NI17-7|IL31RA;nc|ENSG00000164509|Q8NI17-8|IL31RA;nc|ENSG00000164509|Q8NI17-9|IL31RA;nc|ENSG00000164509|Q8NI17|IL31RA 36.12702656103203 0.1984647928738587 5 {[QG]|[NA]}G[HS]NQQN 9 -1 66.186 0.0 0.0 5.5783 0.0 0.0 0.0 233.0941881230964 233.0941881230964 26.699909436434403 0.0 0.0 0.0 0 0.5 1.3979400086720375 1.416386562212267 2.0356668758921828 {[QG]|[NA]}G[HS]NQQN 5.5783 - 3367 1 2.954 188807.1 0.9100000262260436 837 3625 4461 SUDHL4_400M_050219_1,4464 SUDHL4_400M_050219_1,4464,STSWMEVNFA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4467 21.608 800.0 130510.0 25 0 6055.9 -1 0 92 628.7856526664093 2511.113504799237 4 629.2865478396416 MULTI CID FTMS 0 0 0 4466 33850.23046875 0.2025018633895687 -14 0.18292236328125 1 5 {[QG]|[NA]}GA[HS]NQQNA 11 -1 30.883 0.0 0.0 1.2298 0.0 0.0 0.0 1415.634035826658 1415.634035826658 18.80442958011106 0.0 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 {[QG]|[NA]}GA[HS]NQQNA 1.2298 - 1285 1 2.954 81639.7 0.5600000023841858 838 3627 4466 SUDHL4_400M_050219_1,4467 SUDHL4_400M_050219_1,4467, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4470 21.618 193.0 414850.0 25 0 63240.0 34656 SPPPPPPPP 9 91 441.740137657774 881.465722382348 2 441.7395202517509 MULTI CID FTMS 0 0 0 4469 313177.1875 0.4665975546912989 27 -0.457406997680664 1 Unmodified _SPPPPPPPP_ ENSG00000099999|ENST00000382363|RNF215;ENSG00000100312|ENST00000216139|ACR;ENSG00000103479|ENST00000262133|RBL2;ENSG00000107816|ENST00000454422|LZTS2;ENSG00000109920|ENST00000263773|FNBP4;ENSG00000120549|ENST00000376454|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;ENSG00000136754|ENST00000376140|ABI1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000164944|ENST00000297591|VIRMA;ENSG00000184863|ENST00000401878|RBM33;ENSG00000260428|ENST00000567180|SCX;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;nc|ENSG00000109920|Q8N3X1-2|FNBP4;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000015285|ENST00000376701|WAS;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000100201|ENST00000403230|DDX17;REV__ENSG00000107816|ENST00000454422|LZTS2;REV__ENSG00000112541|ENST00000539869|PDE10A;REV__ENSG00000127666|ENST00000248244|TICAM1;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENSG00000141867|ENST00000679869|BRD4;REV__ENSG00000143006|ENST00000371445|DMRTB1;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000204334|ENST00000697325|ERICH2;REV__ENSG00000242265|ENST00000612748|PEG10;REV__ENST00000216019.11_1_22:38881942-38884127:-|nuORF;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF;REV__ENST00000361272.8_2_8:17102747-17104366:-|nuORF;REV__ENST00000431312.2_1_22:38881942-38884127:-|nuORF;REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF;REV__ENST00000482108.1_2_7:94293788-94294991:+|nuORF;REV__ENST00000508096.1_1_10:126605730-126631034:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100201|Q92841-1|DDX17;REV__nc|ENSG00000100201|Q92841-2|DDX17;REV__nc|ENSG00000100201|Q92841-3|DDX17;REV__nc|ENSG00000139218|Q99590-2|SCAF11;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000168066|Q15637-5|SF1;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 93.88341677533236 0.0134066622201488 5 [PS]PPPP[YK] 8 3 + 65.856 0.0 0.0 7.4712 7.4712 96.128 0.0 0.0 0.0 20.66946789630613 51.87637158299074 20.66946789630613 21.760912590556813 0 1.1989700043360187 2.0 1.2931576817365436 0.0 [PS]PPPP[YK];{[HG]|PP}SPPP[YK];[YK]SPP[YK];{[HG]|PP}PSPP[YK];[PS][YK]P[YK];[PS]P[YK][YK];[YK]PSP[YK];{[HG]|PP}PPSP[YK];{[NV]|[RG]}[YV]P[YK];{[HG]|PP}S[YK][YK] 7.4712;5.0024;4.9274;4.7717;4.7276;3.5267;2.9999;2.8443;1.4235;1.058 -;-;-;-;-;-;-;-;-;- 141 1 2.954 66319.6 1.0 839 3629 4469 SUDHL4_400M_050219_1,4470 SUDHL4_400M_050219_1,4470,SPPPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4473 21.638 800.0 46811.0 25 0 6509.2 -1 VCWWRYWWHYP 11 69 580.2641941227894 1737.770752968568 3 580.6003295779228 MULTI CID FTMS 0 0 0 4472 18938.3984375 0.2342180151293408 1 -0.0162563323974609 1 Carbamidomethyl (C) _VC(Carbamidomethyl (C))WWRYWWHYP_ ENST00000410111.7_1_2:86406577-86422494:-|nuORF 0.0 0.8751479354844584 5 N 1 -1 11.259 0.0 0.0 0.6479 0.0 0.0 1605.7168111734493 0.0 1605.7168111734493 0.0 0.4216044285001796 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.6479 - 80 + 1 2.954 37293.7 0.6100000143051147 840 3631 4472 SUDHL4_400M_050219_1,4473 SUDHL4_400M_050219_1,4473,VCWWRYWWHYP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4476 21.646 35.0 1161300.0 25 0 365410.0 + 28559 PTRASQPL 8 57 435.2458994789768 868.4772460247536 2 435.2457153201103 MULTI CID FTMS 0 0 0 4475 1410505.375 0.4653188279552457 10 -0.1718082427978515 1 Unmodified _PTRASQPL_ REV__ENSG00000110427|ENST00000658780|KIAA1549L 16.942295170755138 0.6606234159769251 5 PT 2 -1 45.217 0.0 0.0 5.2064 0.0 0.0 0.0 667.3549378288237 667.3549378288237 32.74227503252014 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 PT 5.2064 + + 16 + 1 2.941 38075.4 1.0 841 3633 4475 SUDHL4_400M_050219_1,4476 SUDHL4_400M_050219_1,4476,PTRASQPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4477 21.661 800.0 137200.0 25 0 39408.0 + 32159 RVQVVGTYR 9 111 539.3118980742723 1076.6092432153446 2 539.3118163943291 MULTI CID FTMS 0 0 0 4475 90145.46875 0.3788526850504646 -8 0.0816154479980468 2 Unmodified _RVQVVGTYR_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 10.799506525563784 0.5443532743200366 5 PR 2 8 24.653 0.0 0.0 2.2899 0.0 0.0 805.4432408733509 0.0 805.4432408733509 0.0 14.057319898009908 0.0 0.0 0 0.5 0.0 0.0 0.1694451763165201 PR 2.2899 - 63 + 1 2.941 88303.8 0.6399999856948853 842 3633 4475 SUDHL4_400M_050219_1,4477 SUDHL4_400M_050219_1,4477,RVQVVGTYR False True RVQVVGTYR 21.660591 539.311816394329 1129130.375 4475.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 -0.2413623929023742 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4479 21.665 93.0 730570.0 25 0 148130.0 + 32383 RYRPGTVALR 10 77 396.9036392460048 1187.6890883382143 3 396.9034911990166 MULTI CID FTMS 0 0 0 4478 557346.1875 0.2794464968608746 13 -0.2057323455810547 1 Unmodified _RYRPGTVALR_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7 26.120906184454547 0.3818084954799617 5 RYRPGTVA{I|L}R 10 0 + 63.849 0.0 0.0 5.3759 5.3759 92.335 0.0 0.0 0.0 52.255631547766654 20.026975159433533 20.026975159433533 63.84942536088872 0 0.6989700043360187 0.0 0.0 0.3494850021680094 + + RYRPGTVA{I|L}R 5.3759 + + 103 + 1 2.941 58888.7 1.0 843 3634 4478 SUDHL4_400M_050219_1,4479 SUDHL4_400M_050219_1,4479,RYRPGTVALR False True RYRPGTVALR 21.665216 396.903491199017 18424866.0 4478.0 ENSG00000275379|ENST00000616365|H3C11;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000163041|ENST00000366815|H3-3A;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000188375|ENST00000340398|H3-5 8.980189482371012 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4481 21.67 32.0 4930000.0 25 0 497460.0 -1 0 59 624.7868010535902 2495.1180983479608 4 625.0377685427666 MULTI CID FTMS 0 0 0 4480 2795649.25 0.7775715474349645 -7 0.0577220916748046 1 5 DD 2 -1 24.776 0.0 0.0 0.99299 0.0 0.0 728.3382888067432 1533.703497287807 2262.0417860945504 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 DD 0.99299 - 8 + 1 2.941 122417.7 1.0 844 3635 4480 SUDHL4_400M_050219_1,4481 SUDHL4_400M_050219_1,4481, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4484 21.69 800.0 122910.0 25 0 9004.6 + 2480 AQYEDIAQKS 10 118 576.7803995832918 1151.5462462333835 2 576.7799560427666 MULTI CID FTMS 0 0 0 4483 74696.0078125 0.6298102952110293 1 -0.0300674438476562 1 Unmodified _AQYEDIAQKS_ ENSG00000167768|ENST00000252244|KRT1 51.487983226225225 0.0714176344394665 5 [QA]YED{I|L}AQ[KS] 10 0 + 60.553 0.0 0.0 5.2584 5.2584 87.003 0.0 0.0 0.0 47.78883191235891 9.84179765751736 9.84179765751736 9.164539485499247 0 1.274227503252014 1.0 0.2742275032520141 0.7443929072036284 + + [QA]YED{I|L}AQ[KS];[QA]YED{I|L}A[AG][KS];[QA]YVVDDQ[KS];[QA]Y[DV][YV]P[TP];[QA]Y{[{M(Oxidation (M))|F}C]|[YS]}{I|L}{I|L}P[TP];[QA]Y[MT]{[NV]|[RG]}Q[TP];[QA]YVV{[YD]|[{M(Oxidation (M))|F}M]}P[TP];[QA]YVVAHH{NN|[MP]|[D{I|L}]|[EV]} 5.2584;4.4626;1.8634;1.0381;0.63446;0.48154;0.44181;0.34703 +;-;-;-;-;-;-;- + 248 + 1 2.941 80163.5 0.699999988079071 845 3637 4483 SUDHL4_400M_050219_1,4484 SUDHL4_400M_050219_1,4484,AQYEDIAQKS True True AQYEDIAQKS 21.689912 576.779956042767 523867.625 4483.0 ENSG00000167768|ENST00000252244|KRT1 5.832024733225505 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4485 21.704 800.0 118050.0 25 0 12607.0 + 7256 EESNYELEGK 10 120 599.2678691358212 1196.5211853384424 2 599.2681152224541 MULTI CID FTMS 0 0 0 4483 84488.9609375 0.3395429523952334 -3 0.0131111145019531 2 Unmodified _EESNYELEGK_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 74.19965305603844 0.0188013450058842 5 EESNYE{I|L}EGK 10 0 + 90.579 0.0 0.0 7.5702 7.5702 92.96 0.0 0.0 0.0 70.86912475804317 16.299184013512814 16.299184013512814 9.164539485499262 0 0.3494850021680094 1.5228787452803376 1.0228787452803376 1.3033121444636098 + + EESNYE{I|L}EGK;EESGGYE{I|L}EGK;EESNYE{[DA]|[EG]}{I|L}K;EESGGYE{[DA]|[EG]}{I|L}K;[NS]{I|L}{I|L}[Y{M(Oxidation (M))|F}]NS[HC];[KG]E{I|L}[Y{M(Oxidation (M))|F}]NS[HC];[VS]Q{I|L}[Y{M(Oxidation (M))|F}]NS[HC];EESN[Y{M(Oxidation (M))|F}]{[NV]|[RG]}[VP];{[DA]|[EG]}K{I|L}[Y{M(Oxidation (M))|F}]NS[HC];[NS]{I|L}{I|L}[Y{M(Oxidation (M))|F}]GGS[HC] 7.5702;6.8043;5.2196;4.4536;2.6247;2.5415;2.2472;1.9098;1.8667;1.8587 +;-;-;-;-;-;-;-;-;- + 701 + 1 2.941 76206.1 0.6299999952316284 846 3637 4483 SUDHL4_400M_050219_1,4485 SUDHL4_400M_050219_1,4485,EESNYELEGK True True EESNYELEGK 21.703743 599.268115222454 1129429.5 4483.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 8.621281305948893 2.0 True 10.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 4488 21.724 800.0 159410.0 25 0 13588.0 + 12195 GQRPTQPVY 9 140 523.2753711224635 1044.536189311727 2 523.2754394412041 MULTI CID FTMS 0 0 0 4487 100880.515625 0.4574801928850981 -3 0.0379714965820312 1 Unmodified _GQRPTQPVY_ ENSG00000105771|ENST00000270066|SMG9;ENST00000595700.5_1_19:44242246-44254893:-|nuORF;nc|ENSG00000105771|Q9H0W8-2|SMG9 39.94969957227396 0.0757326808254658 5 [VP]E[WR]PVY 8 6 + 70.252 0.0 0.0 6.7257 6.7257 94.395 0.0 0.0 0.0 17.579700210466598 14.554687406276017 14.554687406276017 17.579700210466598 0 1.4291746928241125 2.0 0.3252574989159953 0.7302046884880937 [VP]E[WR]PVY;[EP]V[WR]PVY;[AG]GR[TP]QPVY;{[QG]|[NA]}R[TP]QPVY;[AG]G[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PVY;[AG]T[RP]GQPVY;{[QG]|[NA]}[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PVY;[AG]P[KG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PVY;[AG]P[WK]QPVY;[QP][KG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PVY 6.7257;5.0427;3.7869;3.5616;3.5256;3.3302;3.3002;3.2171;3.2109;2.9685 -;-;-;+;-;-;-;-;-;- + 772 1 2.941 105419.5 0.6600000262260437 847 3639 4487 SUDHL4_400M_050219_1,4488 SUDHL4_400M_050219_1,4488,GQRPTQPVY True True GQRPTQPVY 21.724087 523.275439441204 992774.4375 4487.0 ENST00000595700.5_1_19:44242246-44254893:-|nuORF;;ENSG00000105771|ENST00000270066|SMG9;;nc|ENSG00000105771|Q9H0W8-2|SMG9 5.385536670684815 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4489 21.738 800.0 185580.0 25 0 22662.0 + 35571 STQMTITTQK 10 134 569.7922195648275 1137.569886196455 2 569.7925292849541 MULTI CID FTMS 0 0 0 4487 99185.828125 0.0450007556965054 -9 0.0902538299560546 2 Unmodified _STQMTITTQK_ ENSG00000181143|ENST00000397910|MUC16 91.08480475639789 0.0092558408645064 5 {[MG]|[TS]}QMT{I|L}TTQK 10 0 + 77.617 0.0 0.0 6.8231 6.8231 91.535 0.0 0.0 0.0 4.884381005764311 10.008200638363164 4.884381005764311 9.164539485499262 0 1.035666875892183 0.0 1.3494850021680094 1.341129063296272 + + {[MG]|[TS]}QMT{I|L}TTQK;{[MG]|[TS]}[AG]MT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}TT[AG]K;{[MG]|[TS]}QMT{I|L}TKSAA;{[MG]|[TS]}QMT{I|L}TK[QT];{[MG]|[TS]}[AG]MT{I|L}TT[AG]K;{[MG]|[TS]}[AG]MT{I|L}TKSAA;{[MG]|[TS]}[AG]MT{I|L}TK[QT];{[MG]|[TS]}QMT{I|L}[YV]VP;{[MG]|[TS]}[AG]MT{I|L}[YV]VP 6.8231;6.0175;6.0175;5.9433;5.6299;5.215;5.1408;4.8242;4.479;3.3 +;-;-;-;-;-;-;-;-;- + 1183 + 1 2.941 113428.1 0.6499999761581421 848 3639 4487 SUDHL4_400M_050219_1,4489 SUDHL4_400M_050219_1,4489,STQMTITTQK True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4491 21.743 68.0 1296700.0 25 0 108270.0 -1 0 43 832.7131794260767 2495.11770887843 3 833.0479614138603 MULTI CID FTMS 0 0 0 4490 667221.375 0.9774061717113371 -3 0.0642452239990234 1 5 D 1 -1 10.485 0.0 0.0 0.4202 0.0 0.0 1651.752283463184 725.3176171401963 2377.06990060338 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 D 0.4202 - 6 + 1 2.919 68620.9 1.0 849 3640 4490 SUDHL4_400M_050219_1,4491 SUDHL4_400M_050219_1,4491, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4492 21.757 800.0 53106.0 25 0 16901.0 -1 0 34 1057.7719932979894 3170.294150494168 3 1058.106494128704 MULTI CID FTMS 0 0 0 4490 168869.96875 0.3693237674443018 -9 0.1163749694824218 2 5 G 1 -1 6.9897 0.0 0.0 0.22047 0.0 0.0 1856.666884387541 1253.5932100885375 3110.260094476079 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.22047 - 2 + 1 2.919 51735.8 0.5199999809265137 850 3640 4490 SUDHL4_400M_050219_1,4492 SUDHL4_400M_050219_1,4492, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4493 21.762 290.0 230930.0 25 0 30962.0 + 35040 SQRPPTRETF 10 75 406.880206132845 1217.618788998735 3 407.2155334353447 MULTI CID FTMS 0 0 0 4490 92845.140625 0.6560117687322669 -2 0.0341777801513671 3 Unmodified _SQRPPTRETF_ ENSG00000155629|ENST00000339364|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1 19.62595529434964 0.5182375435722777 5 SQRPP[{M(Oxidation (M))|F}V][Q{I|L}]{M(Oxidation (M))|F} 10 4 + 55.45 0.0 0.0 4.554 4.554 78.705 0.0 0.0 0.0 36.15865011156764 11.25447181216778 11.25447181216778 2.156818820794939 0 0.805462187404089 0.0 0.0 0.5 SQRPP[{M(Oxidation (M))|F}V][Q{I|L}]{M(Oxidation (M))|F};SQRPP[MD][K{I|L}]{M(Oxidation (M))|F};SQRP[{M(Oxidation (M))|F}V]P[Q{I|L}]{M(Oxidation (M))|F};SQRPP[{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};SQRP[WR]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F};SQRPP[YT]{[QN]|[E{I|L}]|[KN]}Q;SQRPP[{M(Oxidation (M))|F}V][YK]P;SQRPP[{M(Oxidation (M))|F}V]{[HG]|PP}PP;SQRPP[YK]{[QS]|[NT]}Q;SQRPP[MN][Y{I|L}]{I|L} 4.554;4.3769;4.0595;3.5473;3.5231;3.51;3.4996;3.4656;3.3178;3.3 -;-;-;-;-;-;-;-;-;- 173 + 1 2.919 58145.0 1.0 851 3640 4490 SUDHL4_400M_050219_1,4493 SUDHL4_400M_050219_1,4493,SQRPPTRETF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4495 21.772 384.0 281630.0 25 0 85620.0 + 1067 AGHLSTAQY 9 111 474.2332763898808 946.4519998465616 2 474.2338744997978 MULTI CID FTMS 0 0 0 4494 57674.9609375 0.1000796120404921 15 -0.3064117431640625 1 Unmodified _AGHLSTAQY_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 46.92087301778293 0.0471210510596396 5 [HQ]{I|L}STAQY 8 2 + 29.913 0.0 0.0 3.1605 3.1605 85.419 0.0 0.0 0.0 5.484550065040281 12.923296849832589 5.484550065040281 25.03450193442011 0 0.3935078169319297 0.0 1.1643943297944483 0.0 [HQ]{I|L}STAQY;{[TV]|[{I|L}S]}[HQ]TAQY 3.1605;0.51545 -;- 129 1 2.919 89819.7 1.0 852 3641 4494 SUDHL4_400M_050219_1,4495 SUDHL4_400M_050219_1,4495,AGHLSTAQY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4496 21.774 99.0 536660.0 25 0 61207.0 + 14032 IAHDTGTSL 9 83 457.7328329582812 913.4511129833623 2 457.7325012087822 MULTI CID FTMS 0 0 0 4494 549391.0625 1.0 0 0.0 2 Unmodified _IAHDTGTSL_ ENSG00000186141|ENST00000334163|POLR3C 28.486842064014134 0.1687311288560894 5 [HV]{I|L}[WC(Carbamidomethyl (C))]S{I|L} 7 6 + 24.71 0.0 0.0 2.7051 2.7051 78.951 0.0 0.0 0.0 3.767507096020992 12.702585265340288 3.767507096020992 6.760460294693257 0 0.0 0.0 0.3494850021680094 0.0 [HV]{I|L}[WC(Carbamidomethyl (C))]S{I|L};[YR]HYY{I|L} 2.7051;1.965 -;- 144 + 1 2.919 46938.8 1.0 853 3641 4494 SUDHL4_400M_050219_1,4496 SUDHL4_400M_050219_1,4496,IAHDTGTSL False True IAHDTGTSL 21.773888 457.732501208782 2633257.0 4494.0 ENSG00000186141|ENST00000334163|POLR3C 5.787481625874837 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4497 21.779 269.0 252450.0 25 0 20662.0 -1 LTACSRTL 8 83 461.2433837255811 920.4722145179622 2 461.2427245974541 MULTI CID FTMS 0 0 0 4494 122034.40625 0.5508323277318214 -1 0.0245399475097656 3 Carbamidomethyl (C) _LTAC(Carbamidomethyl (C))SRTL_ ENST00000534358.5_2_11:118393671-118393731:+|nuORF 14.838274106304384 0.6917062315640577 5 [{I|L}T]AP 4 -1 44.693 0.0 0.0 4.8554 0.0 0.0 0.0 535.2284227984738 535.2284227984738 34.41515096531488 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 [{I|L}T]AP 4.8554 - 125 + 1 2.919 57737.2 1.0 854 3641 4494 SUDHL4_400M_050219_1,4497 SUDHL4_400M_050219_1,4497,LTACSRTL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4498 21.793 800.0 87516.0 25 0 4415.3 -1 0 56 637.0335142812445 2544.104951258578 4 637.0340453982353 MULTI CID FTMS 0 0 0 4494 80905.7890625 0.9440873050529744 -3 0.0587177276611328 4 5 DDD 3 -1 16.198 0.0 0.0 0.63668 0.0 0.0 694.2747033111153 1501.7003243106944 2195.9750276218097 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DDD 0.63668 - 12 + 1 2.919 57835.0 0.4799999892711639 855 3641 4494 SUDHL4_400M_050219_1,4498 SUDHL4_400M_050219_1,4498, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4500 21.797 34.0 3739400.0 25 0 495550.0 -1 0 50 500.0307171518899 2495.1172034264496 5 500.2315551638603 MULTI CID FTMS 0 0 0 4499 2175906.5 0.8373748056921229 2 -0.047525405883789 1 5 D 1 -1 10.485 0.0 0.0 0.4202 0.0 0.0 1651.750685641 725.3166450960916 2377.067330737092 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 D 0.4202 - 20 + 1 2.919 102544.3 1.0 856 3642 4499 SUDHL4_400M_050219_1,4500 SUDHL4_400M_050219_1,4500, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4501 21.8 101.0 722160.0 25 0 109550.0 + 12540 GVGPVPARA 9 93 412.2430446322115 822.471536331223 2 412.2426940798759 MULTI CID FTMS 0 0 0 4499 586657.125 0.2519929602617104 -7 0.1274089813232422 2 Unmodified _GVGPVPARA_ ENSG00000129636|ENST00000320640|ITFG1 28.486842064014134 0.1687311288560894 5 [VG]GPVA 6 3 50.916 0.0 0.0 6.1907 0.0 0.0 0.0 339.1800631158813 339.1800631158813 26.725490200071285 0.0 0.0 0.0 0 0.5994850021680094 2.0 0.0 0.0 [VG]GPVA 6.1907 - 199 + 1 2.919 62320.9 1.0 857 3642 4499 SUDHL4_400M_050219_1,4501 SUDHL4_400M_050219_1,4501,GVGPVPARA False True GVGPVPARA 21.799852 412.242694079876 23382040.0 4499.0 ENSG00000129636|ENST00000320640|ITFG1 3.927757024765015 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4502 21.814 800.0 201890.0 25 0 36874.0 17513 KPIILIGWN 9 125 527.324388855826 1052.634224778452 2 527.3247558474541 MULTI CID FTMS 0 0 0 4499 129392.5 0.5323045218552803 -4 0.0888843536376953 3 Unmodified _KPIILIGWN_ ENSG00000114982|ENST00000431828|KANSL3;ENST00000447759.5_3_2:97261350-97293793:-|nuORF;ENST00000487070.5_1_2:97267510-97285240:-|nuORF;ENST00000488907.5_1_2:97276365-97278231:-|nuORF;ENST00000597150.5_1_2:97261350-97297069:-|nuORF;nc|ENSG00000114982|Q9P2N6-2|KANSL3;nc|ENSG00000114982|Q9P2N6-4|KANSL3;nc|ENSG00000114982|Q9P2N6-5|KANSL3;nc|ENSG00000114982|Q9P2N6-6|KANSL3;nc|ENSG00000114982|Q9P2N6-8|KANSL3;nc|ENSG00000114982|Q9P2N6|KANSL3 4.3292370932331545 0.7635526921153418 5 KPT 3 7 24.693 0.0 0.0 2.3458 0.0 0.0 56.06189974900253 667.3536960964414 723.4155958454439 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 KPT 2.3458 - 112 + 1 2.919 127463.8 0.5600000023841858 858 3642 4499 SUDHL4_400M_050219_1,4502 SUDHL4_400M_050219_1,4502,KPIILIGWN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4504 21.818 21.0 2274200.0 25 0 368910.0 + 39231 VAAAESHPL 9 72 447.73770499947386 893.4608570657477 2 447.7376281619072 MULTI CID FTMS 0 0 0 4503 2564888.5 0.8607594023385315 2 -0.0303325653076171 1 Unmodified _VAAAESHPL_ ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 36.04419817259434 0.0971720506436186 5 {[VA]|[{I|L}G]}AAESH[{I|L}P] 9 0 + 59.67 0.0 0.0 6.6786 6.6786 95.794 0.0 0.0 0.0 36.41752731212998 7.147642715192504 7.147642715192504 59.67039459535172 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + + {[VA]|[{I|L}G]}AAESH[{I|L}P] 6.6786 + + 143 + 1 2.897 46478.9 1.0 859 3643 4503 SUDHL4_400M_050219_1,4504 SUDHL4_400M_050219_1,4504,VAAAESHPL True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4505 21.822 175.0 371490.0 25 0 49877.0 + 34878 SQGFSHSQM 9 97 504.71381996573245 1007.4130869982648 2 504.7135803103447 MULTI CID FTMS 0 0 0 4503 223951.765625 0.1885210886575617 -6 0.1399002075195312 2 Unmodified _SQGFSHSQM_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 34.93206674587334 0.1032771302489716 5 {[QS]|[NT]}G 3 6 21.325 0.0 0.0 2.1168 0.0 0.0 0.0 732.2776554399243 732.2776554399243 7.829693599488294 0.0 0.0 0.0 0 0.5 0.0 0.2614393726401688 0.3252574989159953 + {[QS]|[NT]}G 2.1168 + + 183 1 2.897 56142.1 1.0 860 3643 4503 SUDHL4_400M_050219_1,4505 SUDHL4_400M_050219_1,4505,SQGFSHSQM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4506 21.826 255.0 225380.0 25 0 25541.0 + 31386 RNVSTGDVNVE 11 79 595.2941072394656 1188.573661545731 2 595.2938720583916 MULTI CID FTMS 0 0 0 4503 338088.5 1.0 0 0.0 3 Unmodified _RNVSTGDVNVE_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 30.43146612281011 0.3776625119172622 5 {[NV]|[RG]}RSTGDVNVE 11 2 + 67.727 0.0 0.0 5.6982 5.6982 88.169 0.0 0.0 0.0 5.862435673934286 49.768445264106845 5.862435673934286 9.128498242811006 0 1.0 0.0 0.0 0.3807196863200844 {[NV]|[RG]}RSTGDVNVE;{[NV]|[RG]}RSTGDVGGVE;[KG][RD]TGDVNVE;[KG][VS]WGDVNVE;{M(Oxidation (M))|F}VNVD{[TV]|[{I|L}S]}[PA]VE;[KG][RD]TGDVGGVE;{[NV]|[RG]}D[KT]GDVNVE;{[NV]|[RG]}RSWWNVE;[KG][VS]WGDVGGVE;{[NV]|[RG]}D[KT]GDVGGVE 5.6982;4.9302;4.8375;4.2494;4.2494;4.0695;4.0643;4.0309;3.4814;3.2963 -;-;-;-;-;-;-;-;-;- 497 1 2.897 47213.7 1.0 861 3643 4503 SUDHL4_400M_050219_1,4506 SUDHL4_400M_050219_1,4506,RNVSTGDVNVE False True RNVSTGDVNVE 21.826373 595.293872058392 1227218.875 4503.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 8.494800885518393 2.0 True 11.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 4507 21.84 800.0 113620.0 25 0 29226.0 + 35041 SQRPPTRETF 10 74 609.8157466570494 1217.6169403808988 2 609.8148681521416 MULTI CID FTMS 0 0 0 4503 90445.921875 0.9523978678014524 -1 0.0209484100341796 4 Unmodified _SQRPPTRETF_ ENSG00000155629|ENST00000339364|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1 16.149105407346934 0.5765757077271437 5 {[QS]|[NT]}R 3 7 14.195 0.0 0.0 1.1658 0.0 0.0 0.0 843.4015527678706 843.4015527678706 2.2049999164467966 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3252574989159953 + {[QS]|[NT]}R 1.1658 + + 16 1 2.897 71013.6 0.5199999809265137 862 3643 4503 SUDHL4_400M_050219_1,4507 SUDHL4_400M_050219_1,4507,SQRPPTRETF False True SQRPPTRETF 21.840211 609.814868152142 1729100.5625 4503.0 nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1;;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;;ENSG00000155629|ENST00000339364|PIK3AP1 5.494770050048828 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4510 21.849 7.4 4429400.0 25 0 231840.0 + -1 EMETKQMQAF 10 66 629.7762056889572 1257.5378584447144 2 629.7762939333916 MULTI CID FTMS 0 0 0 4509 7115433.0 0.6781144286344912 -4 0.0814476013183593 1 Oxidation (M) _EM(Oxidation (M))ETKQMQAF_ REV__ENSG00000137877|ENST00000320955|SPTBN5 9.38312468134398 0.6832340498775793 5 [QA]HDEAGAQNA{M(Oxidation (M))|F} 12 -1 + 65.315 0.0 0.0 5.1939 5.1939 77.79 0.0 0.0 0.0 0.0539503188670664 6.784017657985721 0.0539503188670664 0.0539503188670664 0 0.8182503180159344 0.0 0.7302046884880937 0.4247425010840047 [QA]HDEAGAQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YC]|[HE]}EAGAQNA{M(Oxidation (M))|F};[QA]HDEAGANQA{M(Oxidation (M))|F};{[QG]|[NA]}{[YC]|[HE]}EAGANQA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YC]|[HE]}EAQQNA{M(Oxidation (M))|F};[QA]HDEAQNQA{M(Oxidation (M))|F};{[QG]|[NA]}{[YC]|[HE]}EAQNQA{M(Oxidation (M))|F};[HV]NQAGAH{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F};[QA]HDEAGAQGGA{M(Oxidation (M))|F} 5.1939;5.1896;4.9545;4.9502;4.9075;4.9032;4.6681;4.6638;4.6544;4.4704 -;-;-;-;-;-;-;-;-;- 994 1 2.897 31283.6 1.0 863 3645 4509 SUDHL4_400M_050219_1,4510 SUDHL4_400M_050219_1,4510,EMETKQMQAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4511 21.862 800.0 144260.0 25 0 20037.0 -1 0 150 548.2896915498671 547.2824150832671 1 548.2902709841728 MULTI CID FTMS 0 0 0 4509 59589.4296875 0.5933531230583643 2 -0.0223884582519531 2 5 [HD]E 3 -1 18.217 0.0 0.0 3.3287 0.0 0.0 0.0 163.13013782180147 163.13013782180147 -0.1991783829530611 0.0 -0.1991783829530611 0.0 0 0.0 0.744727494896694 0.3807196863200844 0.0 [HD]E 3.3287 - 160 1 2.897 88913.2 0.6700000166893005 864 3645 4509 SUDHL4_400M_050219_1,4511 SUDHL4_400M_050219_1,4511, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4514 21.883 800.0 177140.0 25 0 17785.0 -1 FADTWMMFSE 10 108 648.7500415876134 1295.4855302420267 2 648.7493774294853 MULTI CID FTMS 0 0 0 4513 179509.84375 0.7160361296704726 -3 0.0261440277099609 1 2 Oxidation (M) _FADTWM(Oxidation (M))M(Oxidation (M))FSE_ ENSG00000162733|ENST00000367921|DDR2 9.38312468134398 0.6832340498775793 5 [QA]HDE[MD][HN]AE 11 -1 + 55.31 0.0 0.0 4.2694 4.2694 75.062 0.0 0.0 0.0 9.357285695614372 32.60654199722712 9.357285695614372 0.141048209728325 0 1.7614393726401687 0.0 0.8494850021680094 0.5 [QA]HDE[MD][HN]AE;[QA]HDE[MD]DHQA;[QA]HDE[MD][HN]EA;[QA]HDE[MD]DH[AG]A;[HD][QA]E[MD]DHQA;[HD]E[QA][MD]DHQA;[HD]E[MD][QA]DHQA;[TP]RD[MD]Y{[{M(Oxidation (M))|F}D]|MM}H 4.2694;4.2585;3.9996;3.5539;2.5345;1.9777;0.7879;0.028674 -;-;-;-;-;-;-;- 264 1 2.897 106441.9 0.8899999856948853 865 3647 4513 SUDHL4_400M_050219_1,4514 SUDHL4_400M_050219_1,4514,FADTWMMFSE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4515 21.896 800.0 196600.0 25 0 16430.0 + -1 KTQINVLMK 9 118 545.8183116876223 1089.6220704420446 2 545.8181030154228 MULTI CID FTMS 0 0 0 4513 109032.8203125 0.2208853525935327 -7 0.1283760070800781 2 Oxidation (M) _KTQINVLM(Oxidation (M))K_ REV__ENSG00000280204|ENST00000641544|OR1S1;REV__nc|ENSG00000280204|Q8NH92|OR1S1 9.38312468134398 0.5871240394367778 5 T{M(Oxidation (M))|F}K 3 -1 28.061 0.0 0.0 2.5753 0.0 0.0 695.4330578461446 0.0 695.4330578461446 0.0 7.387344842752441 0.0 0.0 0 0.805462187404089 0.0 0.0 0.2215141619232908 T{M(Oxidation (M))|F}K 2.5753 - 154 + 1 2.897 123164.5 0.75 866 3647 4513 SUDHL4_400M_050219_1,4515 SUDHL4_400M_050219_1,4515,KTQINVLMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4517 21.91 571.0 137970.0 25 0 13291.0 + 30516 REIESSPQY 9 99 554.7668539843306 1107.5191550354612 2 554.7668334841728 MULTI CID FTMS 0 0 0 4516 113017.9375 0.5512452071875173 -3 0.0523548126220703 1 Unmodified _REIESSPQY_ ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ENST00000564284.1_1_16:28841101-28842119:+|nuORF;ENST00000570284.1_1_16:28840745-28842349:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 47.594388314883695 0.0456443387682827 5 [QP]S[KS]SSPQY 10 5 + 51.743 0.0 0.0 4.672 4.672 84.345 0.0 0.0 0.0 8.361431973613307 18.02674212288025 8.361431973613307 8.361431973613307 0 1.0924778212679485 1.154901959985743 0.805462187404089 0.0 [QP]S[KS]SSPQY;{[RE]|[WV]}{I|L}ESSPQY;[YE]P[KP]SPQY;[PS]Q[KS]SSPQY;{[RE]|[WV]}{I|L}{[MG]|[TS]}DPQY;{[RE]|[WV]}[HN]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}Y 4.672;3.917;3.3717;3.3272;1.8802;0.58069 -;+;-;-;-;- + 293 1 2.878 67693.2 1.0 867 3648 4516 SUDHL4_400M_050219_1,4517 SUDHL4_400M_050219_1,4517,REIESSPQY True True REIESSPQY 21.910008 554.766833484173 1234017.75 4516.0 ENST00000564284.1_1_16:28841101-28842119:+|nuORF;;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;;ENST00000570284.1_1_16:28840745-28842349:+|nuORF;;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;;ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;;ENSG00000168488|ENST00000336783|ATXN2L;;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;;nc|ENSG00000168488|Q8WWM7-5|ATXN2L 8.616576989491781 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4518 21.916 355.0 272680.0 25 0 29317.0 34657 SPPPPPPPP 9 112 441.740137657774 881.465722382348 2 441.7399474978447 MULTI CID FTMS 0 0 0 4516 92716.8359375 0.1381372930528404 46 -1.0217266082763672 2 Unmodified _SPPPPPPPP_ ENSG00000099999|ENST00000382363|RNF215;ENSG00000100312|ENST00000216139|ACR;ENSG00000103479|ENST00000262133|RBL2;ENSG00000107816|ENST00000454422|LZTS2;ENSG00000109920|ENST00000263773|FNBP4;ENSG00000120549|ENST00000376454|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;ENSG00000136754|ENST00000376140|ABI1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000164944|ENST00000297591|VIRMA;ENSG00000184863|ENST00000401878|RBM33;ENSG00000260428|ENST00000567180|SCX;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;nc|ENSG00000109920|Q8N3X1-2|FNBP4;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000015285|ENST00000376701|WAS;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000100201|ENST00000403230|DDX17;REV__ENSG00000107816|ENST00000454422|LZTS2;REV__ENSG00000112541|ENST00000539869|PDE10A;REV__ENSG00000127666|ENST00000248244|TICAM1;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENSG00000141867|ENST00000679869|BRD4;REV__ENSG00000143006|ENST00000371445|DMRTB1;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000204334|ENST00000697325|ERICH2;REV__ENSG00000242265|ENST00000612748|PEG10;REV__ENST00000216019.11_1_22:38881942-38884127:-|nuORF;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF;REV__ENST00000361272.8_2_8:17102747-17104366:-|nuORF;REV__ENST00000431312.2_1_22:38881942-38884127:-|nuORF;REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF;REV__ENST00000482108.1_2_7:94293788-94294991:+|nuORF;REV__ENST00000508096.1_1_10:126605730-126631034:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100201|Q92841-1|DDX17;REV__nc|ENSG00000100201|Q92841-2|DDX17;REV__nc|ENSG00000100201|Q92841-3|DDX17;REV__nc|ENSG00000139218|Q99590-2|SCAF11;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000168066|Q15637-5|SF1;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 70.71552829651908 0.0208223590022201 5 [PS]PPPPKY 8 3 + 56.393 0.0 0.0 6.3976 6.3976 93.383 0.0 0.0 0.0 20.37116003895957 8.424778212679485 8.424778212679485 16.44116631572505 0 1.3424778212679485 2.0 1.177825934852436 0.0 [PS]PPPPKY;[PS][YK]PKY;[YK]SPPKY;{[HG]|PP}PSPPKY;{[HG]|PP}SPPPKY;[PS]P[YK]KY;[YK]PSPKY;{[HG]|PP}PPSPKY;[VG][{I|L}T]AMKY;{[NV]|[RG]}[YV]PKY 6.3976;4.5324;4.0866;3.931;3.9289;3.3669;2.8249;2.6693;2.2845;0.97919 -;-;-;-;-;-;-;-;-;- 132 1 2.878 79298.5 1.0 868 3648 4516 SUDHL4_400M_050219_1,4518 SUDHL4_400M_050219_1,4518,SPPPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4519 21.93 800.0 162460.0 25 0 7148.0 + 45214 YQYGEASMNAF 11 124 640.7664815215635 1279.518410109927 2 640.7662231326103 MULTI CID FTMS 0 0 0 4516 114695.7578125 0.7867437541437725 -2 0.0339813232421875 3 Unmodified _YQYGEASMNAF_ REV__ENST00000517412.1_1_5:67522458-67569396:+|nuORF 22.65808497894818 0.560183898709508 5 [QA]HDE[WY]NA{M(Oxidation (M))|F} 10 -1 + 75.099 0.0 0.0 5.8693 5.8693 81.415 0.0 0.0 0.0 1.2560847351514326 3.979400086720375 1.2560847351514326 1.2560847351514326 0 3.0356668758921828 0.0 0.0 1.5356668758921828 [QA]HDE[WY]NA{M(Oxidation (M))|F};[AG]AHDE[WY]NA{M(Oxidation (M))|F};[QA]HDEA{[YD]|[{M(Oxidation (M))|F}M]}NA{M(Oxidation (M))|F};[AG]AHDEA{[YD]|[{M(Oxidation (M))|F}M]}NA{M(Oxidation (M))|F};[QA]HD[{M(Oxidation (M))|F}T]DDNA{M(Oxidation (M))|F};[QA]HDE[WY]N{M(Oxidation (M))|F}A;[AG]AHD[{M(Oxidation (M))|F}T]DDNA{M(Oxidation (M))|F};[AG]AHDE[WY]N{M(Oxidation (M))|F}A;[QA]HDEA{[YD]|[{M(Oxidation (M))|F}M]}N{M(Oxidation (M))|F}A;[AG]AHDEA{[YD]|[{M(Oxidation (M))|F}M]}N{M(Oxidation (M))|F}A 5.8693;5.7711;5.7271;5.6317;5.5628;5.5583;5.4674;5.4601;5.4161;5.3207 -;-;-;-;-;-;-;-;-;- 4180 1 2.878 99793.0 0.5600000023841858 869 3648 4516 SUDHL4_400M_050219_1,4519 SUDHL4_400M_050219_1,4519,YQYGEASMNAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4521 21.935 125.0 1119900.0 25 0 114100.0 -1 0 52 624.7868010535902 2495.1180983479608 4 625.0378295779228 MULTI CID FTMS 0 0 0 4520 686041.8125 0.1908131335684234 7 -0.1387214660644531 1 5 DN 2 -1 27.078 0.0 0.0 1.0853 0.0 0.0 728.3378618935964 1534.702749036387 2263.040610929984 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.8494850021680094 DN 1.0853 - 27 + 1 2.878 109738.7 1.0 870 3649 4520 SUDHL4_400M_050219_1,4521 SUDHL4_400M_050219_1,4521, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4522 21.937 72.0 750970.0 25 0 130530.0 + 18595 LADPSAKAV 9 86 436.2480470008995 870.481541068599 2 436.2477294802666 MULTI CID FTMS 0 0 0 4520 769015.25 0.9352436430878815 -2 0.0638542175292968 2 Unmodified _LADPSAKAV_ ENSG00000107854|ENST00000371627|TNKS2;ENSG00000173273|ENST00000310430|TNKS;nc|ENSG00000173273|O95271-2|TNKS 27.628801355627647 0.1796483985696185 5 [{I|L}A]DPSA 6 3 46.643 0.0 0.0 5.3583 0.0 0.0 0.0 313.1883638971313 313.1883638971313 21.00833760139686 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3494850021680094 0.0 + [{I|L}A]DPSA 5.3583 + + 158 + 1 2.878 47076.4 1.0 871 3649 4520 SUDHL4_400M_050219_1,4522 SUDHL4_400M_050219_1,4522,LADPSAKAV False True LADPSAKAV 21.93682 436.247729480267 5796281.0 4520.0 ENSG00000107854|ENST00000371627|TNKS2;;ENSG00000173273|ENST00000310430|TNKS;;nc|ENSG00000173273|O95271-2|TNKS 6.155124187469482 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4523 21.947 566.0 122710.0 25 0 7737.1 + 2419 AQQKNLEGY 9 105 525.7642404808244 1049.5139280284486 2 525.7648193240166 MULTI CID FTMS 0 0 0 4520 182088.71875 1.0 0 0.0 3 Unmodified _AQQKNLEGY_ ENSG00000122545|ENST00000350320|SEPTIN7;nc|ENSG00000122545|Q16181-2|SEPTIN7 47.74868867922204 0.0453060283459952 5 [QA]QQQ 5 6 32.135 0.0 0.0 3.0619 0.0 0.0 0.0 463.23252283267817 463.23252283267817 5.150224315330757 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.3494850021680094 [QA]QQQ 3.0619 - 492 + 1 2.878 57565.0 1.0 872 3649 4520 SUDHL4_400M_050219_1,4523 SUDHL4_400M_050219_1,4523,AQQKNLEGY True True AQQKNLEGY 21.946744 525.764819324017 598373.25 4520.0 ENSG00000122545|ENST00000350320|SEPTIN7;;nc|ENSG00000122545|Q16181-2|SEPTIN7 5.378809928894043 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4525 21.963 800.0 107370.0 25 0 5789.9 + 35561 STQMTITTQK 10 119 577.7898586178768 1153.5651643025535 2 577.7891113162041 MULTI CID FTMS 0 0 0 4524 96386.9453125 0.8427979117105086 -1 0.0165691375732421 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 69.33821966488729 0.0189579340102328 5 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 57.369 0.0 0.0 4.9732 4.9732 86.035 0.0 0.0 0.0 42.67663127451898 17.006346308822394 17.006346308822394 9.164539485499247 0 0.6139829889124311 0.0 0.7887254899964358 1.0189301784845295 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;[HD]PNT{I|L}TTQK;[HD]Q[PS]{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA;[HD]PNT{I|L}TT[AG]K;{[MG]|[TS]}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WY]{I|L}P 4.9732;4.1788;4.1788;3.3874;3.0318;2.6927;2.5347;2.2405;1.8983;1.7795 +;-;-;-;-;-;-;-;-;- + 387 + 1 2.878 72655.1 0.5299999713897705 873 3650 4524 SUDHL4_400M_050219_1,4525 SUDHL4_400M_050219_1,4525,STQMTITTQK True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4528 21.984 759.0 267480.0 25 0 19602.0 + 35014 SQPYGQQSY 9 156 529.2329402205081 1056.451327507816 2 529.2323486208916 MULTI CID FTMS 0 0 0 4527 268083.625 0.1749711518190997 -5 0.1004619598388671 1 Unmodified _SQPYGQQSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 114.20165948288296 0.0037743244297685 5 {[QS]|[NT]}AQ[{M(Oxidation (M))|F}V]QSY 9 4 + 71.722 0.0 0.0 6.789 6.789 83.923 0.0 0.0 0.0 1.2900983018750765 1.2900983018750765 1.2900983018750765 1.2900983018750765 0 1.3494850021680094 1.0 1.416386562212267 0.7742275032520141 {[QS]|[NT]}AQ[{M(Oxidation (M))|F}V]QSY;{[QS]|[NT]}YPGQQSY;[AG]SYPGQQSY;{[QS]|[NT]}{[ET]|[MV]}QSQSY;{[QS]|[NT]}A[AG][{M(Oxidation (M))|F}V]QSY;{[QS]|[NT]}YPGQ[AG]SY;{[QS]|[NT]}YPG[AG]QSY;{[QS]|[NT]}PYGQQSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQQSQSY;{[QS]|[NT]}YPGQYSQ 6.789;6.6669;6.1328;6.0613;5.9174;5.7952;5.7952;5.7636;5.7024;5.6186 -;-;-;-;-;-;-;+;-;- + 4201 + 1 2.868 155176.4 1.0 874 3652 4527 SUDHL4_400M_050219_1,4528 SUDHL4_400M_050219_1,4528,SQPYGQQSY True True SQPYGQQSY 21.983639 529.232348620892 20063165.25 4527.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 6.407299359639485 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4529 21.988 239.0 343040.0 25 0 77665.0 -1 0 80 497.2526822961981 496.2454058295981 1 497.2525817751884 MULTI CID FTMS 0 0 0 4527 329635.1875 0.0828645571181848 12 -0.2138233184814453 2 5 {I|L} 1 -1 16.99 0.0 0.0 3.4236 0.0 0.0 365.1503873743231 0.0 365.1503873743231 0.0 5.880456295278407 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.4236 - 18 + 1 2.868 66355.0 1.0 875 3652 4527 SUDHL4_400M_050219_1,4529 SUDHL4_400M_050219_1,4529, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4530 21.991 156.0 414180.0 25 0 149060.0 -1 0 73 472.2730624742763 471.2657860076763 1 472.2726318240166 MULTI CID FTMS 0 0 0 4527 218297.09375 0.7545735613157512 6 -0.1671218872070312 3 5 Y 1 -1 11.109 0.0 0.0 2.3573 0.0 0.0 290.1910464830653 0.0 290.1910464830653 0.0 11.10924374808178 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.3573 - 4 + 1 2.868 55090.9 1.0 876 3652 4527 SUDHL4_400M_050219_1,4530 SUDHL4_400M_050219_1,4530, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4531 22.005 800.0 246090.0 25 0 56662.0 -1 0 101 785.8602879467461 3139.412045920584 4 786.1122314333916 MULTI CID FTMS 0 0 0 4527 120507.3203125 0.2316881082307067 -10 0.1741313934326172 4 5 NV[WR]GE 6 -1 26.911 0.0 0.0 0.85721 0.0 0.0 864.3407802548207 1530.6758499467376 2395.016630201558 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 NV[WR]GE 0.85721 - 295 + 1 2.868 141332.8 0.6499999761581421 877 3652 4527 SUDHL4_400M_050219_1,4531 SUDHL4_400M_050219_1,4531, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4533 22.01 57.0 836080.0 25 0 51848.0 + 35572 STQMTITTQK 10 79 569.7922195648275 1137.569886196455 2 569.7925903201103 MULTI CID FTMS 0 0 0 4532 956437.8125 0.4339372383418572 5 -0.1288986206054687 1 Unmodified _STQMTITTQK_ ENSG00000181143|ENST00000397910|MUC16 64.9267550582149 0.0236624172317635 5 {[MG]|[TS]}QMT{I|L}TTQK 10 0 + 65.476 0.0 0.0 5.7558 5.7558 88.428 0.0 0.0 0.0 46.779802302340926 15.051817469181628 15.051817469181628 9.164539485499247 0 1.1307196863200843 0.0 0.5 0.932621763945521 + + {[MG]|[TS]}QMT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}TT[AG]K;{[MG]|[TS]}[AG]MT{I|L}TTQK;{[MG]|[TS]}QMT{I|L}T[KS]AA;{[MG]|[TS]}[AG]MT{I|L}TT[AG]K;{[MG]|[TS]}[AG]MT{I|L}T[KS]AA 5.7558;4.9502;4.9502;4.1539;4.1477;3.3515 +;-;-;-;-;- + 148 + 1 2.868 39355.3 1.0 878 3653 4532 SUDHL4_400M_050219_1,4533 SUDHL4_400M_050219_1,4533,STQMTITTQK True True STQMTITTQK 22.009633 569.79259032011 21728318.0 4532.0 ENSG00000181143|ENST00000397910|MUC16 9.99688688913981 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4534 22.024 800.0 238500.0 25 0 61678.0 -1 0 95 1057.7719932979894 3170.294150494168 3 1058.105761706829 MULTI CID FTMS 0 0 0 4532 164725.65625 0.3602600297217441 4 -0.1027240753173828 2 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WQ]SQSY 8 -1 54.085 0.0 0.0 1.706 0.0 0.0 0.0 2127.824765078406 2127.824765078406 20.27261297692088 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.0501648626366045 1.5501648626366045 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WQ]SQSY 1.706 - 4979 1 2.868 142751.9 0.6899999976158142 879 3653 4532 SUDHL4_400M_050219_1,4534 SUDHL4_400M_050219_1,4534, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4535 22.029 289.0 279320.0 25 0 89552.0 -1 0 68 502.2833892678319 501.27611280123193 1 502.2832824587822 MULTI CID FTMS 0 0 0 4532 175288.890625 0.6235374631968859 43 -0.9667434692382812 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.868 66429.4 1.0 880 3653 4532 SUDHL4_400M_050219_1,4535 SUDHL4_400M_050219_1,4535, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4536 22.043 800.0 123700.0 25 0 35549.0 2082 APPPPPPPP 9 37 866.4779787146489 865.4707022480488 1 866.4773437380791 MULTI CID FTMS 0 0 0 4532 83386.2421875 0.7357477569164028 8 -0.1556510925292968 4 Unmodified _APPPPPPPP_ ENSG00000005483|ENST00000311117|KMT2E;ENSG00000005483|ENST00000311117|KMT2E;ENSG00000010017|ENST00000011619|RANBP9;ENSG00000095539|ENST00000210633|SEMA4G;ENSG00000105323|ENST00000392006|HNRNPUL1;ENSG00000105879|ENST00000440859|CBLL1;ENSG00000106299|ENST00000223023|WASL;ENSG00000107758|ENST00000360663|PPP3CB;ENSG00000122574|ENST00000242140|WIPF3;ENSG00000126464|ENST00000418929|PRR12;ENSG00000127481|ENST00000375254|UBR4;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000137710|ENST00000645495|RDX;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000150275|ENST00000644397|PCDH15;ENSG00000158195|ENST00000618852|WASF2;ENSG00000158195|ENST00000618852|WASF2;ENSG00000165821|ENST00000537235|SALL2;ENSG00000168066|ENST00000377390|SF1;ENSG00000168066|ENST00000377390|SF1;ENSG00000171634|ENST00000306378|BPTF;ENSG00000171992|ENST00000307662|SYNPO;ENSG00000173273|ENST00000310430|TNKS;ENSG00000182601|ENST00000331351|HS3ST4;ENSG00000183307|ENST00000331437|TMEM121B;ENSG00000184863|ENST00000401878|RBM33;ENSG00000184937|ENST00000452863|WT1;ENSG00000185090|ENST00000373045|MANEAL;ENSG00000196367|ENST00000456197|TRRAP;ENSG00000204463|ENST00000676615|BAG6;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000215474|ENST00000425639|SKOR2;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000005483|Q8IZD2-7|KMT2E;nc|ENSG00000005483|Q8IZD2-7|KMT2E;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;nc|ENSG00000105879|Q75N03-2|CBLL1;nc|ENSG00000107758|P16298-2|PPP3CB;nc|ENSG00000107758|P16298-3|PPP3CB;nc|ENSG00000107758|P16298-4|PPP3CB;nc|ENSG00000126464|Q9ULL5-2|PRR12;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000127481|Q5T4S7-5|UBR4;nc|ENSG00000133816|O94851|MICAL2;nc|ENSG00000137710|P35241-2|RDX;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000137710|P35241-5|RDX;nc|ENSG00000150275|Q96QU1-2|PCDH15;nc|ENSG00000150275|Q96QU1-4|PCDH15;nc|ENSG00000150275|Q96QU1-6|PCDH15;nc|ENSG00000150275|Q96QU1|PCDH15;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000168066|Q15637-2|SF1;nc|ENSG00000168066|Q15637-7|SF1;nc|ENSG00000168066|Q15637-7|SF1;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;nc|ENSG00000173273|O95271-2|TNKS;nc|ENSG00000182095|O15417-2|TNRC18;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000185090|Q5VSG8-3|MANEAL;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379|BAG6;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000010017|ENST00000011619|RANBP9;REV__ENSG00000077420|ENST00000376236|APBB1IP;REV__ENSG00000095539|ENST00000210633|SEMA4G;REV__ENSG00000100312|ENST00000216139|ACR;REV__ENSG00000101901|ENST00000394780|ALG13;REV__ENSG00000103479|ENST00000262133|RBL2;REV__ENSG00000105323|ENST00000392006|HNRNPUL1;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000119283|ENST00000366653|TRIM67;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__ENSG00000126464|ENST00000418929|PRR12;REV__ENSG00000126705|ENST00000673934|AHDC1;REV__ENSG00000127528|ENST00000248071|KLF2;REV__ENSG00000133124|ENST00000372129|IRS4;REV__ENSG00000136848|ENST00000408936|DAB2IP;REV__ENSG00000136928|ENST00000259455|GABBR2;REV__ENSG00000139718|ENST00000604567|SETD1B;REV__ENSG00000139800|ENST00000267294|ZIC5;REV__ENSG00000139800|ENST00000267294|ZIC5;REV__ENSG00000141664|ENST00000269499|ZCCHC2;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000156603|ENST00000431606|MED19;REV__ENSG00000158195|ENST00000618852|WASF2;REV__ENSG00000166924|ENST00000300179|NYAP1;REV__ENSG00000168297|ENST00000356151|PXK;REV__ENSG00000168505|ENST00000306318|GBX2;REV__ENSG00000172216|ENST00000303004|CEBPB;REV__ENSG00000176058|ENST00000409012|TPRN;REV__ENSG00000176165|ENST00000313071|FOXG1;REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENSG00000182263|ENST00000333129|FIGN;REV__ENSG00000182484|ENST00000359512|WASH6P;REV__ENSG00000183153|ENST00000578689|GJD3;REV__ENSG00000196367|ENST00000456197|TRRAP;REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENSG00000247746|ENST00000500968|USP51;REV__ENSG00000260428|ENST00000567180|SCX;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000400706.3_1_12:88275-90926:+|nuORF;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;REV__ENST00000528205.1_1_11:57472131-57479651:-|nuORF;REV__ENST00000534677.1_1_11:57472348-57479651:-|nuORF;REV__ENST00000546084.5_1_9:123664731-123664899:-|nuORF;REV__ENST00000557932.5_1_15:102513813-102516466:+|nuORF;REV__ENST00000590137.1_1_17:74143442-74143655:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000095539|Q9NTN9|SEMA4G;REV__nc|ENSG00000101901|Q9NP73-3|ALG13;REV__nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;REV__nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;REV__nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__nc|ENSG00000133124|O14654|IRS4;REV__nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000139718|Q9UPS6-2|SETD1B;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000156603|A0JLT2-2|MED19;REV__nc|ENSG00000156603|A0JLT2|MED19;REV__nc|ENSG00000166924|Q6ZVC0-2|NYAP1;REV__nc|ENSG00000168297|Q7Z7A4-3|PXK;REV__nc|ENSG00000168297|Q7Z7A4-4|PXK;REV__nc|ENSG00000168297|Q7Z7A4-5|PXK;REV__nc|ENSG00000168297|Q7Z7A4-6|PXK;REV__nc|ENSG00000168297|Q7Z7A4-7|PXK;REV__nc|ENSG00000172216|P17676-2|CEBPB;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5|TRRAP;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6;REV__nc|ENSG00000234769|A8MWX3|WASH4P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P;REV__nc|ENSG00000292372|Q9NQA3|WASH6P 56.04830969593885 0.0282699710924866 5 APPPPPP{[HG]|PP} 9 0 + 69.007 0.0 0.0 7.9733 7.9733 97.334 0.0 0.0 0.0 16.478174818886373 6.478174818886373 6.478174818886373 25.105742396127923 0 1.1382104921644451 0.0 0.0 0.0 + + APPPPPP{[HG]|PP};A[YK]PPP{[HG]|PP};APPP[YK]{[HG]|PP};APP[YK]P{[HG]|PP};AP[YK]PP{[HG]|PP};A[YK]PP[YK];APP[YK][YK];AP[YK]P[YK];{[HG]|PP}APPP[YK];A[YK][YK]{[HG]|PP} 7.9733;5.0725;4.9153;4.9153;4.5817;4.3319;4.1747;3.8411;2.4402;2.0224 +;-;-;-;-;-;-;-;-;- + 80 + 1 2.868 71121.5 0.449999988079071 881 3653 4532 SUDHL4_400M_050219_1,4536 SUDHL4_400M_050219_1,4536,APPPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4537 22.057 800.0 42573.0 25 0 13436.0 -1 0 33 1129.7847480764829 3386.3324148296488 3 1130.452929675579 MULTI CID FTMS 0 0 0 4532 76800.46875 0.5627619683221627 -3 0.0582618713378906 5 5 E 1 -1 5.4846 0.0 0.0 0.16196 0.0 0.0 2730.1051942259364 524.1613863580686 3254.266580584005 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.16196 - 4 + 1 2.868 40905.8 0.3799999952316284 882 3653 4532 SUDHL4_400M_050219_1,4537 SUDHL4_400M_050219_1,4537, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4539 22.062 47.0 1072500.0 25 0 191930.0 + 12541 GVGPVPARA 9 71 412.2430446322115 822.471536331223 2 412.2428771853447 MULTI CID FTMS 0 0 0 4538 1042019.1875 0.4475893814596171 5 -0.0811920166015625 1 Unmodified _GVGPVPARA_ ENSG00000129636|ENST00000320640|ITFG1 28.486842064014134 0.1687311288560894 5 [VG]GPVA 6 3 52.268 0.0 0.0 6.355 0.0 0.0 0.0 339.1799410455688 339.1799410455688 28.07700898067321 0.0 0.0 0.0 0 0.6237125054200234 2.0 0.0 0.0 [VG]GPVA 6.355 - 175 + 1 2.862 43435.1 1.0 883 3654 4538 SUDHL4_400M_050219_1,4539 SUDHL4_400M_050219_1,4539,GVGPVPARA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4540 22.065 177.0 404540.0 25 0 37387.0 + 14 AAAGRAPAL 9 92 399.23505202166206 796.4555511101241 2 399.2352477908134 MULTI CID FTMS 0 0 0 4538 293721.75 0.2637549954107829 -14 0.3186225891113281 2 Unmodified _AAAGRAPAL_ REV__ENST00000442885.2_1_11:65655295-65655958:-|nuORF;REV__ENST00000528937.1_1_11:65654989-65655958:-|nuORF;REV__ENST00000532679.5_1_11:65653270-65655931:-|nuORF 24.67388899826682 0.2172451872415813 5 AAAAGR 6 -1 53.377 0.0 0.0 6.7018 0.0 0.0 0.0 296.16144739322505 296.16144739322505 44.34276059950351 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.2742275032520141 AAAAGR 6.7018 - 229 + 1 2.862 60120.9 1.0 884 3654 4538 SUDHL4_400M_050219_1,4540 SUDHL4_400M_050219_1,4540,AAAGRAPAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4543 22.074 93.0 631690.0 25 0 103950.0 26808 PAPPPPPPP 9 74 433.74224106244367 865.4699291916874 2 433.7422057986259 MULTI CID FTMS 0 0 0 4542 482341.6875 0.718115133027966 7 -0.0995388031005859 1 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;ENSG00000103495|ENST00000322945|MAZ;ENSG00000105429|ENST00000251268|MEGF8;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139687|ENST00000267163|RB1;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000158195|ENST00000618852|WASF2;ENSG00000165821|ENST00000537235|SALL2;ENSG00000167771|ENST00000301459|RCOR2;ENSG00000169862|ENST00000304623|CTNND2;ENSG00000171634|ENST00000306378|BPTF;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000182601|ENST00000331351|HS3ST4;ENSG00000184937|ENST00000452863|WT1;ENSG00000196367|ENST00000456197|TRRAP;ENSG00000197483|ENST00000598519|ZNF628;ENSG00000205177|ENST00000379011|C11orf91;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000272333|ENST00000420124|KMT2B;ENST00000263228.3_1_9:33817570-33817774:+|nuORF;ENST00000378204.6_1_8:119123785-119123992:-|nuORF;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;ENST00000592092.1_1_19:36224173-36224410:+|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000103495|P56270-2|MAZ;nc|ENSG00000103495|P56270-3|MAZ;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000169862|Q9UQB3-2|CTNND2;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;nc|nan|Q3C1V1-2|C11orf91;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000060749|ENST00000650167|QSER1;REV__ENSG00000077420|ENST00000376236|APBB1IP;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000108819|ENST00000612501|PPP1R9B;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000112320|ENST00000317357|SOBP;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__ENSG00000126464|ENST00000418929|PRR12;REV__ENSG00000136848|ENST00000408936|DAB2IP;REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000168874|ENST00000306279|ATOH8;REV__ENSG00000171450|ENST00000302625|CDK5R2;REV__ENSG00000176058|ENST00000409012|TPRN;REV__ENSG00000176165|ENST00000313071|FOXG1;REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENSG00000182484|ENST00000359512|WASH6P;REV__ENSG00000188620|ENST00000357878|HMX3;REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENSG00000247746|ENST00000500968|USP51;REV__ENSG00000274588|ENST00000611977|DGKK;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000400706.3_1_12:88275-90926:+|nuORF;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;REV__ENST00000557932.5_1_15:102513813-102516466:+|nuORF;REV__ENST00000602719.5_1_16:85784553-85784670:-|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000168874|Q96SQ7-2|ATOH8;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6;REV__nc|ENSG00000234769|A8MWX3|WASH4P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P;REV__nc|ENSG00000292372|Q9NQA3|WASH6P 56.04830969593885 0.0282699710924866 5 [PA][YK]P[YK] 7 6 + 35.488 0.0 0.0 4.1004 4.1004 85.216 0.0 0.0 0.0 6.815819256143101 12.187200862615695 6.815819256143101 9.273174902439578 0 0.8252574989159953 2.0 0.0 0.0 [PA][YK]P[YK];[PA]P[YK][YK];{[NV]|[RG]}[{M(Oxidation (M))|F}V]P[YK];{[HG]|PP}A[YK][YK] 4.1004;3.029;1.3297;0.60611 -;-;-;- 77 1 2.862 51326.9 1.0 885 3656 4542 SUDHL4_400M_050219_1,4543 SUDHL4_400M_050219_1,4543,PAPPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4544 22.076 104.0 428220.0 25 0 41587.0 + 34879 SQGFSHSQM 9 80 504.71381996573245 1007.4130869982648 2 504.7140075564384 MULTI CID FTMS 0 0 0 4542 418250.71875 0.3520806393756587 7 -0.0995388031005859 2 Unmodified _SQGFSHSQM_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 51.629811660486645 0.0367964933207742 5 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QM{[QS]|[NT]} 9 4 + 33.259 0.0 0.0 3.3014 3.3014 77.13 0.0 0.0 0.0 10.601533604438742 20.159999255842905 10.601533604438742 3.467874862246568 0 0.5 0.0 0.8818108876706969 0.6307196863200843 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QM{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}QM{[QS]|[NT]};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]M{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}[AG]M{[QS]|[NT]};{[QS]|[NT]}G[C(Carbamidomethyl (C))R]{[DA]|[EG]}{[QS]|[NT]};[HS][YQ]QM{[QS]|[NT]};{[QS]|[NT]}[RN]{[C(Carbamidomethyl (C))E]|[WC]}{[QS]|[NT]};[HS][YN]SW{[QS]|[NT]};[HS][YQ][AG]M{[QS]|[NT]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QQQM{[QS]|[NT]} 3.3014;2.9572;2.3874;2.0378;1.815;1.4265;0.83689;0.73012;0.5071;0.49025 -;-;-;-;-;-;-;-;-;- 152 1 2.862 43058.2 1.0 886 3656 4542 SUDHL4_400M_050219_1,4544 SUDHL4_400M_050219_1,4544,SQGFSHSQM True True SQGFSHSQM 22.075738 504.714007556438 10739736.0 4542.0 ENSG00000181143|ENST00000397910|MUC16 5.647371610005696 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4545 22.09 800.0 259070.0 25 0 19255.0 + 39232 VAAAESHPL 9 155 447.73770499947386 893.4608570657477 2 447.7374145388603 MULTI CID FTMS 0 0 0 4542 128885.84375 0.0432532259535443 15 -0.250772476196289 3 Unmodified _VAAAESHPL_ ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 42.09456458481378 0.0639583784996157 5 VAAAESH{I|L}P 9 2 + 67.661 0.0 0.0 7.5729 7.5729 89.801 0.0 0.0 0.0 33.46787486224656 5.038555079669074 5.038555079669074 5.038555079669074 0 0.872363747448347 1.6989700043360187 0.0 0.0 VAAAESH{I|L}P;VAAAESHP{I|L};VAAAE[HT]VP;VAAY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VP;VA[YG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}P;VA[KG][DN]KY;VA[KG][DN]PPP;VA[YG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L};VA[KG]YYPP;VA[YG][YK]PP 7.5729;7.0089;5.0624;4.557;4.0638;3.5813;3.5298;3.4999;3.4786;3.39 -;+;-;-;-;-;-;-;-;- + 471 + 1 2.862 164693.2 0.6399999856948853 887 3656 4542 SUDHL4_400M_050219_1,4545 SUDHL4_400M_050219_1,4545,VAAAESHPL True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4546 22.103 800.0 70089.0 25 0 3176.0 + 26304 NQYEMQELAF 10 97 636.7835968092669 1271.5526406853337 2 636.7842285037041 MULTI CID FTMS 0 0 0 4542 101821.25 1.0 0 0.0 4 Unmodified _NQYEMQELAF_ REV__ENSG00000071909|ENST00000408978|MYO3B;REV__ENST00000409940.6_1_2:171034716-171376051:+|nuORF;REV__ENST00000438642.6_1_2:171034716-171400468:+|nuORF;REV__ENST00000602629.1_1_2:171225816-171400468:+|nuORF;REV__nc|ENSG00000071909|Q8WXR4-2|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-3|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-4|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-5|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-6|MYO3B;REV__nc|ENSG00000071909|Q8WXR4-7|MYO3B 18.1463463914782 0.5430639438673815 5 {[QG]|[NA]}GA{M(Oxidation (M))|F}T[MT]QNA{M(Oxidation (M))|F} 12 -1 + 61.084 0.0 0.0 4.8039 4.8039 77.781 0.0 0.0 0.0 0.8715017571890016 16.61181443446619 0.8715017571890016 0.8715017571890016 0 0.7614393726401688 1.3010299956639813 0.0 0.6549471895720985 {[QG]|[NA]}GA{M(Oxidation (M))|F}T[MT]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}T[MT]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}]QNA{M(Oxidation (M))|F};{[NV]|[RG]}HDEAQQNA{M(Oxidation (M))|F};[AG]NA{M(Oxidation (M))|F}T[MT]QNA{M(Oxidation (M))|F};[AG]GGA{M(Oxidation (M))|F}T[MT]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}T{M(Oxidation (M))|F}{[NV]|[RG]}NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}T{M(Oxidation (M))|F}{[NV]|[RG]}NA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}T[MT]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}T[MT][AG]NA{M(Oxidation (M))|F} 4.8039;4.7354;4.6917;4.5254;4.4287;4.3948;4.3304;4.2619;4.1029;4.0884 -;-;-;-;-;-;-;-;-;- 1703 1 2.862 48058.2 0.6499999761581421 888 3656 4542 SUDHL4_400M_050219_1,4546 SUDHL4_400M_050219_1,4546,NQYEMQELAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4547 22.108 231.0 364840.0 25 0 200740.0 -1 0 65 470.25903194521305 469.25175547861306 1 470.2565185427666 MULTI CID FTMS 0 0 0 4542 216244.71875 0.1499963800567572 -24 0.431070327758789 5 5 D 1 -1 3.9794 0.0 0.0 0.84803 0.0 0.0 255.11962764833805 96.08233820133046 351.2019658496685 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.84803 - 4 + 1 2.862 70500.1 1.0 889 3656 4542 SUDHL4_400M_050219_1,4547 SUDHL4_400M_050219_1,4547, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4549 22.112 21.0 1560100.0 25 0 66529.0 + -1 EMETKQMQAF 10 75 629.7762056889572 1257.5378584447144 2 629.7763549685478 MULTI CID FTMS 0 0 0 4548 2218678.75 0.2114443453939819 8 -0.0768775939941406 1 Oxidation (M) _EM(Oxidation (M))ETKQMQAF_ REV__ENSG00000137877|ENST00000320955|SPTBN5 13.042465956692816 0.6287021003332052 5 [QA]HDEAQQNA{M(Oxidation (M))|F} 11 -1 + 50.794 0.0 0.0 4.0391 4.0391 78.12 0.0 0.0 0.0 5.439101988399067 31.207090317615123 5.439101988399067 3.0102999566398125 0 0.7742275032520141 0.0 0.0 0.7302046884880937 [QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEAQNQA{M(Oxidation (M))|F};[HD][QA]EAQQNA{M(Oxidation (M))|F};[HD]{[CP]|[EA]}QAQQNA{M(Oxidation (M))|F};[QA]HDEA[AG]QNA{M(Oxidation (M))|F};[QA]HDEAQ[AG]NA{M(Oxidation (M))|F};[QA]HDEAQQGGA{M(Oxidation (M))|F};[HV]NQQA[MD][C(Carbamidomethyl (C))R];[HD][QA]EAQNQA{M(Oxidation (M))|F};[HD]{[CP]|[EA]}QAQNQA{M(Oxidation (M))|F} 4.0391;3.7998;3.456;3.3566;3.3132;3.3132;3.3132;3.2389;3.2166;3.1172 -;-;-;-;-;-;-;-;-;- 407 1 2.862 31903.0 1.0 890 3657 4548 SUDHL4_400M_050219_1,4549 SUDHL4_400M_050219_1,4549,EMETKQMQAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4550 22.116 197.0 271380.0 25 0 76311.0 -1 0 75 540.2315358376865 539.2242593710864 1 540.2313110232353 MULTI CID FTMS 0 0 0 4548 181909.4375 0.6585016606485127 6 -0.0607051849365234 2 5 Y 1 -1 12.764 0.0 0.0 2.3671 0.0 0.0 358.149641916788 0.0 358.149641916788 0.0 11.654966095207122 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.3671 - 8 + 1 2.862 48945.3 1.0 891 3657 4548 SUDHL4_400M_050219_1,4550 SUDHL4_400M_050219_1,4550, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4551 22.12 201.0 348710.0 25 0 43930.0 + 30853 RILQETVK 8 87 493.80334825607065 985.5921435789412 2 493.8033325076103 MULTI CID FTMS 0 0 0 4548 325409.40625 1.0 0 0.0 3 Unmodified _RILQETVK_ ENSG00000156510|ENST00000354624|HKDC1 29.081581746732265 0.4323690340403521 5 {[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}[{I|L}P]TVK 9 5 + 54.427 0.0 0.0 5.5223 5.5223 92.661 0.0 0.0 0.0 3.2366368737751827 33.000671555173824 3.2366368737751827 54.427346590861134 0 1.424742501084005 1.3010299956639813 0.5 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}[{I|L}P]TVK 5.5223 - 200 1 2.862 62425.8 1.0 892 3657 4548 SUDHL4_400M_050219_1,4551 SUDHL4_400M_050219_1,4551,RILQETVK False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4552 22.134 800.0 73830.0 25 0 6666.7 -1 0 47 1047.4777674958982 3139.4114730878946 3 1047.812060534954 MULTI CID FTMS 0 0 0 4548 80814.84375 0.818221446667533 -4 0.1027240753173828 4 5 T 1 -1 6.9897 0.0 0.0 0.22264 0.0 0.0 1476.6761533384042 1558.6695262206752 3035.345679559079 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.22264 - 5 + 1 2.862 47794.1 0.4000000059604645 893 3657 4548 SUDHL4_400M_050219_1,4552 SUDHL4_400M_050219_1,4552, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4555 22.143 123.0 551670.0 25 0 60198.0 -1 KTGVCITALK 10 75 545.8183116876223 1089.6220704420446 2 545.8184081912041 MULTI CID FTMS 0 0 0 4554 364243.25 0.737906242133961 5 -0.0428466796875 1 Carbamidomethyl (C) _KTGVC(Carbamidomethyl (C))ITALK_ ENSG00000073331|ENST00000650871|ALPK1;ENST00000504745.1_1_4:113347516-113362363:+|nuORF;nc|ENSG00000073331|Q96QP1-2|ALPK1 5.296884461304476 0.7021353017287152 5 KTT[{I|L}P][WP]K 8 -1 31.119 0.0 0.0 2.856 0.0 0.0 120.06124458719484 0.0 120.06124458719484 0.0 20.15031251017077 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 KTT[{I|L}P][WP]K 2.856 - 57 + 1 2.862 59682.2 1.0 894 3659 4554 SUDHL4_400M_050219_1,4555 SUDHL4_400M_050219_1,4555,KTGVCITALK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4556 22.157 800.0 200580.0 25 0 21441.0 -1 SQNNADATDC 10 145 548.2055465063976 1094.396540079595 2 548.2072021365166 MULTI CID FTMS 0 0 0 4554 128108.1484375 0.9617453587336324 1 -0.0187969207763671 2 Carbamidomethyl (C) _SQNNADATDC(Carbamidomethyl (C))_ ENSG00000174792|ENST00000311623|ODAPH 8.155526934196011 0.6889124077178598 5 YSQ 3 -1 30.005 0.0 0.0 2.7417 0.0 0.0 0.0 713.2223094412007 713.2223094412007 13.940969761826707 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 YSQ 2.7417 - 114 + 1 2.862 124541.8 0.7300000190734863 895 3659 4554 SUDHL4_400M_050219_1,4556 SUDHL4_400M_050219_1,4556,SQNNADATDC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4561 22.174 158.0 492520.0 25 0 58465.0 + 17638 KPTAAFHLL 9 85 499.2934279320629 996.5723029309258 2 499.2925903201103 MULTI CID FTMS 0 0 0 4560 283940.375 0.9130968885880324 -1 0.0039825439453125 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 5 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3550396153714 667.3550396153714 27.703037561203843 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 52 + 1 2.862 65633.2 1.0 896 3663 4560 SUDHL4_400M_050219_1,4561 SUDHL4_400M_050219_1,4561,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4562 22.18 361.0 198650.0 25 0 38904.0 -1 SMLEDVQRA 9 80 532.7556437341012 1063.4967345350024 2 532.7559692263603 MULTI CID FTMS 0 0 0 4560 112535.296875 0.8593874048191381 1 -0.0121707916259765 2 Oxidation (M) _SM(Oxidation (M))LEDVQRA_ ENSG00000106344|ENST00000223073|RBM28 24.99096001346401 0.2132109383330889 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EDVQ{[QV]|[N{I|L}]|[RA]|[KV]} 9 -1 + 41.717 0.0 0.0 3.9226 3.9226 83.853 0.0 0.0 0.0 30.29669558616975 2.922152515121219 2.922152515121219 9.208187539523747 0 0.8807196863200843 0.0 0.4247425010840047 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EDVQ{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EDV[AG]{[QV]|[N{I|L}]|[RA]|[KV]} 3.9226;3.0568 +;- + 63 + 1 2.862 56827.4 1.0 897 3663 4560 SUDHL4_400M_050219_1,4562 SUDHL4_400M_050219_1,4562,SMLEDVQRA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4565 22.191 206.0 370820.0 25 0 38693.0 -1 0 41 624.786760960842 2495.117937976968 4 625.0374633669853 MULTI CID FTMS 0 0 0 4564 217833.5625 0.9907712258961704 1 -0.0203456878662109 1 5 DD 2 -1 20.969 0.0 0.0 0.84041 0.0 0.0 728.3414639106564 1533.701682626223 2262.0431465368792 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 DD 0.84041 - 16 + 1 2.862 63356.6 1.0 898 3665 4564 SUDHL4_400M_050219_1,4565 SUDHL4_400M_050219_1,4565, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4566 22.205 800.0 199370.0 25 0 48503.0 + 33038 SMLEDVQRA 9 126 532.2948505867541 0 532.2956420779228 PEAK CID FTMS 0 0 0 4564 99115.3828125 0.6374157658342948 9 -0.267190933227539 2 Unmodified _SEPLSVRLY_ ENSG00000106344|ENST00000223073|RBM28 7.289230182591677 0.3433663536648894 5 {I|L}EDVQ 5 7 26.827 0.0 0.0 2.5248 0.0 0.0 233.1458846434057 242.1267031305297 475.2725877739354 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7134679910804405 {I|L}EDVQ 2.5248 - 74 + 1 2.862 127466.6 0.6299999952316284 899 3665 4564 SUDHL4_400M_050219_1,4566 SUDHL4_400M_050219_1,4566,SEPLSVRLY False False SMLEDVQRA 22.204779 532.295642077923 1218224.125 4564.0 ENSG00000106344|ENST00000223073|RBM28 8.094236056009928 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4569 22.215 212.0 268190.0 25 0 41872.0 + 38734 TVADHIQKV 9 72 505.78474533224414 1009.5549377312884 2 505.7846862673759 MULTI CID FTMS 0 0 0 4568 192757.640625 0.7442032897476487 -2 0.0243549346923828 1 Unmodified _TVADHIQKV_ ENSG00000181789|ENST00000314797|COPG1 34.40172386719151 0.1061884637610825 5 {[TV]|[{I|L}S]}ADH{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 42.275 0.0 0.0 4.1875 4.1875 76.804 0.0 0.0 0.0 26.077476436625258 6.60126397298184 6.60126397298184 1.706962271689747 0 0.5796896906561032 2.0 0.0 0.2887254899964357 + + {[TV]|[{I|L}S]}ADH{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}WH{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}ADH{I|L}[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}WH{I|L}[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}V[KS]{[{M(Oxidation (M))|F}C]|[YS]}{[QV]|[N{I|L}]|[RA]|[KV]} 4.1875;4.0184;3.2754;3.101;2.5857 +;-;-;-;- + 67 + 1 2.862 49263.6 1.0 900 3667 4568 SUDHL4_400M_050219_1,4569 SUDHL4_400M_050219_1,4569,TVADHIQKV True True TVADHIQKV 22.21536 505.784686267376 894522.4375 4568.0 ENSG00000181789|ENST00000314797|COPG1 4.473725001017253 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4570 22.221 313.0 190320.0 25 0 34521.0 + 10803 FYRRKKWKGG 10 87 442.589526145496 1324.746749036688 3 442.5891601443291 MULTI CID FTMS 0 0 0 4568 56245.93359375 0.6166937446201358 8 -0.2468318939208984 2 Unmodified _FYRRKKWKGG_ REV__ENST00000423414.5_1_7:130668839-130792560:-|nuORF 8.97624648632007 0.6851160995914376 5 {I|L}KN 3 -1 26.995 0.0 0.0 2.0377 0.0 0.0 951.516405174025 0.0 951.516405174025 0.0 8.400378619456596 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}KN 2.0377 - 93 1 2.862 55639.9 1.0 901 3667 4568 SUDHL4_400M_050219_1,4570 SUDHL4_400M_050219_1,4570,FYRRKKWKGG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4571 22.235 800.0 128860.0 25 0 18511.0 + 1412 ALDESHNQNL 10 138 570.7673353201311 1139.520117707062 2 570.7678710818291 MULTI CID FTMS 0 0 0 4568 94578.1015625 0.7139274025408651 -3 0.0283565521240234 3 Unmodified _ALDESHNQNL_ ENSG00000072786|ENST00000176763|STK10;ENST00000517360.1_1_5:171471888-171480055:-|nuORF 27.22323531849824 0.3570408936368626 5 [{I|L}A]DEC(Carbamidomethyl (C))[R{I|L}]TY 9 6 + 54.664 0.0 0.0 4.7971 4.7971 81.349 0.0 0.0 0.0 32.41312192373542 13.46787486224656 13.46787486224656 3.807196863200844 0 0.805462187404089 2.0 0.3807196863200844 0.5 [{I|L}A]DEC(Carbamidomethyl (C))[R{I|L}]TY;[{I|L}A]DES[WR]TY;[{I|L}A]DE[CG][R{I|L}]TY;[{I|L}A]DES{[ET]|[MV]}{[NV]|[RG]}Y;[{I|L}A]DE[MN][{I|L}A]TY;[{I|L}A]DE{[QD]|[EN]|[WG]|[KD]|[RS]}[VS]TY;[{I|L}A]DE{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{[NV]|[RG]}Y;[{I|L}A]D[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]GT[QT]K;[{I|L}A]DES[PA][Y{M(Oxidation (M))|F}]K;[{I|L}A]DE[K{I|L}]{[C(Carbamidomethyl (C))E]|[WC]}Y 4.7971;4.463;3.989;3.3907;3.0817;3.0415;2.741;2.6706;2.491;2.3988 -;-;-;-;-;-;-;-;-;- 780 + 1 2.862 80426.6 0.5899999737739563 902 3667 4568 SUDHL4_400M_050219_1,4571 SUDHL4_400M_050219_1,4571,ALDESHNQNL False True ALDESHNQNL 22.234886 570.767871081829 785487.0625 4568.0 ENSG00000072786|ENST00000176763|STK10;;ENST00000517360.1_1_5:171471888-171480055:-|nuORF 4.348440885543823 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4573 22.24 55.0 662050.0 25 0 55017.0 + 35015 SQPYGQQSY 9 70 529.2329402205081 1056.451327507816 2 529.2332031130791 MULTI CID FTMS 0 0 0 4572 884904.1875 0.5775537574755623 11 -0.3347301483154297 1 Unmodified _SQPYGQQSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 34.40172386719151 0.1061884637610825 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQQSY{[QS]|[NT]} 9 4 + 45.34 0.0 0.0 4.2917 4.2917 77.2 0.0 0.0 0.0 1.748347070858415 7.147642715192504 1.748347070858415 1.748347070858415 0 0.0 1.5228787452803376 0.4247425010840047 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQQSY{[QS]|[NT]};{[QS]|[NT]}YP{[QG]|[NA]}Y{[QS]|[NT]};{[QS]|[NT]}{[ET]|[MV]}QSY{[QS]|[NT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[AG]QSY{[QS]|[NT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQ[AG]SY{[QS]|[NT]};{[QS]|[NT]}{[ET]|[MV]}[AG]SY{[QS]|[NT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G[AG][AG]SY{[QS]|[NT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{[SA]|[TG]}{[QG]|[NA]}Y{[QS]|[NT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QS]|[NT]}{[QG]|[NA]}Y{[QS]|[NT]};{[QG]|[NA]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QSY{[QS]|[NT]} 4.2917;4.1262;4.0345;3.4201;3.4201;3.1629;2.5526;2.0219;1.6885;1.4785 -;-;-;-;-;-;-;-;-;- 181 1 2.861 33456.6 1.0 903 3668 4572 SUDHL4_400M_050219_1,4573 SUDHL4_400M_050219_1,4573,SQPYGQQSY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4574 22.254 800.0 183950.0 25 0 18555.0 -1 0 67 644.7783143660586 2575.084151597834 4 645.0298950076103 MULTI CID FTMS 0 0 0 4572 91554.9609375 0.1494504184191128 -5 0.0666255950927734 2 5 DH 2 -1 16.722 0.0 0.0 0.64936 0.0 0.0 1731.718301884503 588.2487887018186 2319.967090586322 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 DH 0.64936 - 28 + 1 2.861 110071.3 0.5099999904632568 904 3668 4572 SUDHL4_400M_050219_1,4574 SUDHL4_400M_050219_1,4574, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4576 22.261 209.0 502820.0 25 0 106760.0 -1 0 73 785.8602879467461 3139.412045920584 4 786.3614990115166 MULTI CID FTMS 0 0 0 4575 323949.46875 0.6608276589314354 10 -0.3156032562255859 1 5 QQ[SG]HH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 -1 19.307 0.0 0.0 0.61499 0.0 0.0 2189.9879869379656 0.0 2189.9879869379656 0.0 8.337900136414905 0.0 0.0 0 0.0 0.0 1.048455006504028 0.5 QQ[SG]HH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 0.61499 - 178 + 1 2.861 78126.7 1.0 905 3669 4575 SUDHL4_400M_050219_1,4576 SUDHL4_400M_050219_1,4576, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4577 22.269 491.0 192310.0 25 0 11942.0 27045 PEQNDRTPL 9 135 535.2676210773852 1068.5206892215704 2 535.2668945193291 MULTI CID FTMS 0 0 0 4575 106160.3828125 0.0617355054056535 -5 0.0735816955566406 2 Unmodified _PEQNDRTPL_ ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;ENST00000544562.5_1_14:23067206-23078652:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4 21.74664581756881 0.2544899275067181 5 [EP]QDTRNP{I|L} 9 3 + 34.543 0.0 0.0 3.2327 3.2327 80.517 0.0 0.0 0.0 4.762036441594198 8.195439355418696 4.762036441594198 8.195439355418696 0 0.0 0.0 0.7614393726401688 0.3494850021680094 [EP]QDTRNP{I|L};[EP]QDTRN{I|L}P;[EP]QDTRGGP{I|L};[EP][AG]DTRNP{I|L};[EP][AG]DTRN{I|L}P;[EP]QDTRGG{I|L}P;[EP][AG]DTRGGP{I|L};[EP]Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QNP{I|L};[EP]Q{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[QP]P{I|L};[EP][AG]DTRGG{I|L}P 3.2327;2.4658;2.371;2.371;1.604;1.604;1.5133;1.4779;1.0314;0.7463 -;-;-;-;-;-;-;-;-;- 329 + 1 2.861 75751.1 1.0 906 3669 4575 SUDHL4_400M_050219_1,4577 SUDHL4_400M_050219_1,4577,PEQNDRTPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4578 22.283 800.0 116610.0 25 0 6562.8 + 19033 LDLNAQLEEQG 11 121 615.3049154864215 1228.5952780396428 2 615.3030883669853 MULTI CID FTMS 0 0 0 4575 99278.34375 0.5190164146809324 -4 0.069580078125 3 Unmodified _LDLNAQLEEQG_ REV__ENSG00000101079|ENST00000349004|NDRG3;REV__nc|ENSG00000101079|Q9UGV2-2|NDRG3;REV__nc|ENSG00000101079|Q9UGV2-3|NDRG3 75.76082778847304 0.0157096510099958 5 {NN|[MP]|[D{I|L}]|[EV]}{I|L}NA{[{M(Oxidation (M))|F}H]|[RQ]}QSAN 11 -1 + 86.786 0.0 0.0 7.0639 7.0639 87.592 0.0 0.0 0.0 13.061234795775306 9.128498242810991 9.128498242810991 3.8392564687191566 0 0.8807196863200843 1.154901959985743 2.5233623702246373 1.329689690656103 {NN|[MP]|[D{I|L}]|[EV]}{I|L}NA{[{M(Oxidation (M))|F}H]|[RQ]}QSAN;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[RE]|[WV]}SPQSAN;{NN|[MP]|[D{I|L}]|[EV]}{I|L}WWPQSAN;{NN|[MP]|[D{I|L}]|[EV]}{I|L}NA{[{M(Oxidation (M))|F}H]|[RQ]}[AG]SAN;{NN|[MP]|[D{I|L}]|[EV]}{I|L}GGA{[{M(Oxidation (M))|F}H]|[RQ]}QSAN;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[RE]|[WV]}PSQSAN;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{[RE]|[WV]}SP[AG]SAN;[VG]AA{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}H]|[RQ]}QSAN;{NN|[MP]|[D{I|L}]|[EV]}AAR{[{M(Oxidation (M))|F}H]|[RQ]}QSAN;{NN|[MP]|[D{I|L}]|[EV]}[PA]{[MS]|[{M(Oxidation (M))|F}A]}VPQSAN 7.0639;6.7514;6.6045;6.3209;6.3209;6.0205;6.0084;6.0008;5.9739;5.9268 -;-;-;-;-;-;-;-;-;- 3375 1 2.861 72238.4 0.5199999809265137 907 3669 4575 SUDHL4_400M_050219_1,4578 SUDHL4_400M_050219_1,4578,LDLNAQLEEQG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4580 22.299 800.0 124790.0 25 0 49892.0 -1 0 87 572.3255225527847 571.3182460861847 1 572.3262206912041 MULTI CID FTMS 0 0 0 4579 86661.453125 0.742523732959193 1 -0.03643798828125 1 5 Y 1 -1 16.99 0.0 0.0 2.9738 0.0 0.0 390.2436133730972 0.0 390.2436133730972 0.0 6.611096473669598 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.9738 - 27 + 1 2.861 81103.3 0.5600000023841858 908 3670 4579 SUDHL4_400M_050219_1,4580 SUDHL4_400M_050219_1,4580, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4581 22.306 342.0 224020.0 25 0 19904.0 + 1502 ALGTDAEGQKV 11 93 544.7826008997122 1087.5506488662245 2 544.7830688357353 MULTI CID FTMS 0 0 0 4579 103566.3046875 0.9496874012718868 2 -0.0827674865722656 2 Unmodified _ALGTDAEGQKV_ ENSG00000116266|ENST00000370008|STXBP3;ENST00000472099.1_1_1:109338858-109339065:+|nuORF 27.22323531849824 0.4529927607131788 5 [{I|L}A]GTD{[CP]|[EA]}{[QG]|[NA]}VK 11 2 + 50.319 0.0 0.0 4.6268 4.6268 81.815 0.0 0.0 0.0 38.72483344163861 2.8836146176765 2.8836146176765 4.771212547196626 0 0.7742275032520141 2.0 0.3494850021680094 0.0 [{I|L}A]GTD{[CP]|[EA]}{[QG]|[NA]}VK;[{I|L}A]GTD{[CP]|[EA]}{[QG]|[NA]}KV;[{I|L}A]GT[WE]{[QG]|[NA]}VK;[{I|L}A]GT{[DS]|[MA]|[CV]|TT}[H{I|L}]{M(Oxidation (M))|F}K;[{I|L}A]GT[WE]{[QG]|[NA]}KV;[{I|L}A]GTD{[RE]|[WV]}{NN|[MP]|[D{I|L}]|[EV]}V;[{I|L}A]GV{[CT]|[{M(Oxidation (M))|F}G]}[H{I|L}]{M(Oxidation (M))|F}K;[{I|L}A]GT{[DS]|[MA]|[CV]|TT}[WK][NP];[{I|L}A]GV{[CT]|[{M(Oxidation (M))|F}G]}[WK][NP];[{I|L}A]G{[{M(Oxidation (M))|F}H]|[RQ]}[YG]P{[QV]|[N{I|L}]|[RA]|[KV]} 4.6268;4.1881;4.0221;3.8602;3.5834;3.5834;3.4943;3.1604;2.7945;1.9236 -;+;-;-;-;-;-;-;-;- + 188 + 1 2.861 61944.6 1.0 909 3670 4579 SUDHL4_400M_050219_1,4581 SUDHL4_400M_050219_1,4581,ALGTDAEGQKV False True ALGTDAEGQKV 22.305662 544.783068835735 464397.78125 4579.0 ENST00000472099.1_1_1:109338858-109339065:+|nuORF;;ENSG00000116266|ENST00000370008|STXBP3 5.7863593101501465 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4582 22.32 800.0 57250.0 25 0 2837.8 -1 0 55 842.8906701399001 3367.5335746932 4 843.3934814333916 MULTI CID FTMS 0 0 0 4579 77522.578125 0.6659382404056315 -3 0.0742683410644531 3 5 P 1 -1 6.9897 0.0 0.0 0.20756 0.0 0.0 1708.802605630962 1558.6680798245286 3267.47068545549 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.20756 - 5 + 1 2.861 39421.3 0.4399999976158142 910 3670 4579 SUDHL4_400M_050219_1,4582 SUDHL4_400M_050219_1,4582, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4584 22.324 59.0 769670.0 25 0 105240.0 + 8 AAAARAGLP 9 66 399.23505202166206 796.4555511101241 2 399.2350341677666 MULTI CID FTMS 0 0 0 4583 865489.0625 0.7771881507166912 3 -0.1321296691894531 1 Unmodified _AAAARAGLP_ REV__ENST00000375664.8_2_10:28821439-28821706:+|nuORF 30.22481116460888 0.1466181017706357 5 AAAAG 5 -1 54.718 0.0 0.0 6.8702 0.0 0.0 0.0 452.2625758772674 452.2625758772674 49.65681882079494 0.0 0.0 0.0 0 1.25 2.0 0.0 0.0 AAAAG 6.8702 - 144 + 1 2.861 42289.2 1.0 911 3671 4583 SUDHL4_400M_050219_1,4584 SUDHL4_400M_050219_1,4584,AAAARAGLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4585 22.338 800.0 154450.0 25 0 8715.2 -1 0 67 884.815515668841 4419.041196011205 5 885.2172119021416 MULTI CID FTMS 0 0 0 4583 70211.734375 0.7058271270153975 -1 0.03643798828125 2 5 ASAA[EP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 8 -1 40.155 0.0 0.0 0.90868 0.0 0.0 3614.703934441368 0.0 3614.703934441368 0.0 33.16544871625359 0.0 0.0 0 1.4749073637206092 0.0 0.0 0.0 ASAA[EP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 0.90868 - 51 1 2.861 91167.5 0.4000000059604645 912 3671 4583 SUDHL4_400M_050219_1,4585 SUDHL4_400M_050219_1,4585, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4586 22.352 800.0 120150.0 25 0 4392.3 + 17249 KLMQQQQEV 9 135 566.2965144448798 1130.5784759565595 2 566.2967407107353 MULTI CID FTMS 0 0 0 4583 94330.1015625 0.6486177543705843 -1 0.03643798828125 3 Unmodified _KLMQQQQEV_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 64.23631603340823 0.0237365939569086 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KQQQQEV 9 2 + 60.317 0.0 0.0 5.3351 5.3351 88.094 0.0 0.0 0.0 11.398999383748446 9.335295873671754 9.335295873671754 9.208187539523747 0 0.4802046884880938 0.6777807052660807 0.9392404878284264 1.524227503252014 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KQQQQEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KQQQ[AG]EV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KQQ[AG]QEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KQ[AG]QQEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[AG]QQQEV;[K{I|L}]MQQQQEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KQQ[AG][AG]EV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KQ[AG]Q[AG]EV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KQ[AG][AG]QEV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K[AG]QQ[AG]EV 5.3351;4.5206;4.5206;4.5206;4.5206;4.3268;3.71;3.71;3.71;3.71 -;-;-;-;-;+;-;-;-;- + 1419 1 2.861 77925.0 0.5199999809265137 913 3671 4583 SUDHL4_400M_050219_1,4586 SUDHL4_400M_050219_1,4586,KLMQQQQEV True True KLMQQQQEV 22.351993 566.296740710735 594249.625 4583.0 nc|ENSG00000122779|O15164-2|TRIM24;;ENSG00000122779|ENST00000343526|TRIM24 4.886551698048909 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4587 22.366 800.0 177240.0 25 0 18577.0 -1 0 61 859.3685237761096 2575.0837419285285 3 859.3671142458916 MULTI CID FTMS 0 0 0 4583 70003.859375 0.5316040778904171 -4 0.1107063293457031 4 5 [RD]WRDD 6 -1 24.385 0.0 0.0 0.94698 0.0 0.0 0.0 1728.6944964084307 1728.6944964084307 8.812281309285623 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [RD]WRDD 0.94698 - 48 1 2.861 102220.3 0.4199999868869781 914 3671 4583 SUDHL4_400M_050219_1,4587 SUDHL4_400M_050219_1,4587, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4589 22.372 189.0 404500.0 25 0 49703.0 + 28116 APPPPPPPP 9 86 433.74224106244367 865.4699291916874 2 433.7422973513603 MULTI CID FTMS 0 0 0 4588 204110.328125 0.303881499842093 23 -0.5729312896728516 1 Unmodified _PPPAPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000150275|Q96QU1-2|PCDH15;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000204463|P46379-2|BAG6;ENSG00000005483|ENST00000311117|KMT2E;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000106299|ENST00000223023|WASL;ENSG00000142235|ENST00000600059|LMTK3;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;nc|ENSG00000127481|Q5T4S7-5|UBR4;nc|ENSG00000150275|Q96QU1-6|PCDH15;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000173273|O95271-2|TNKS;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000107758|ENST00000360663|PPP3CB;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000137710|P35241-5|RDX;ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1;nc|ENSG00000168066|Q15637-7|SF1;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;ENSG00000158195|ENST00000618852|WASF2;ENSG00000184937|ENST00000452863|WT1;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000150275|Q96QU1-4|PCDH15;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000204463|P46379|BAG6;nc|ENSG00000005483|Q8IZD2-7|KMT2E;nc|ENSG00000204463|P46379-5|BAG6;ENSG00000168066|ENST00000377390|SF1;ENSG00000165821|ENST00000537235|SALL2;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;nc|ENSG00000182095|O15417-2|TNRC18;nc|ENSG00000171634|Q12830|BPTF;ENSG00000105323|ENST00000392006|HNRNPUL1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;nc|ENSG00000133816|O94851|MICAL2;ENSG00000010017|ENST00000011619|RANBP9;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;nc|ENSG00000185090|Q5VSG8-3|MANEAL;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000150275|Q96QU1|PCDH15;ENSG00000185090|ENST00000373045|MANEAL;ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000107758|P16298-4|PPP3CB;ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000107758|P16298-3|PPP3CB;ENSG00000183307|ENST00000331437|TMEM121B;nc|ENSG00000126464|Q9ULL5-2|PRR12;nc|ENSG00000137710|P35241-2|RDX;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;ENSG00000171634|ENST00000306378|BPTF;ENSG00000204463|ENST00000676615|BAG6;ENSG00000122574|ENST00000242140|WIPF3;nc|ENSG00000107758|P16298-2|PPP3CB;ENSG00000182601|ENST00000331351|HS3ST4;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;ENSG00000184863|ENST00000401878|RBM33;ENSG00000173273|ENST00000310430|TNKS;ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000168066|Q15637-2|SF1;ENSG00000171992|ENST00000307662|SYNPO 56.04830969593885 0.0282699710924866 5 [PA]PPPP[YK] 8 4 + 46.749 0.0 0.0 5.4016 5.4016 90.866 0.0 0.0 0.0 16.400356271339106 21.82741751536844 16.400356271339106 17.378880703663885 0 1.2134679910804405 1.6989700043360187 0.0 0.0 [PA]PPPP[YK];[YK]APP[YK];{[HG]|PP}APPP[YK];{[HG]|PP}PAPP[YK];[PA][YK]P[YK];[PA]P[YK][YK];[YK]PAP[YK];{[HG]|PP}PPAP[YK];{[HG]|PP}A[YK][YK];{[NV]|[RG]}[{M(Oxidation (M))|F}V]P[YK] 5.4016;3.3935;3.347;3.235;3.0471;2.5692;1.8593;1.7008;0.51462;0.5004 -;-;-;-;-;-;-;-;-;- 156 1 2.861 65823.1 1.0 915 3672 4588 SUDHL4_400M_050219_1,4589 SUDHL4_400M_050219_1,4589,PPPAPPPPP False False APPPPPPPP 22.372009 433.74229735136 35509082.25 4588.0 ENSG00000095539|ENST00000210633|SEMA4G;;nc|ENSG00000150275|Q96QU1-2|PCDH15;;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;;nc|ENSG00000184937|P19544-4|WT1;;nc|ENSG00000204463|P46379-2|BAG6;;ENSG00000005483|ENST00000311117|KMT2E;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000106299|ENST00000223023|WASL;;ENSG00000142235|ENST00000600059|LMTK3;;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000150275|Q96QU1-6|PCDH15;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000173273|O95271-2|TNKS;;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;;ENSG00000215474|ENST00000425639|SKOR2;;ENSG00000107758|ENST00000360663|PPP3CB;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;nc|ENSG00000137710|P35241-5|RDX;;ENSG00000105879|ENST00000440859|CBLL1;;nc|ENSG00000105879|Q75N03-2|CBLL1;;nc|ENSG00000168066|Q15637-7|SF1;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;nc|ENSG00000171634|Q12830-4|BPTF;;nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000126464|ENST00000418929|PRR12;;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;;ENSG00000158195|ENST00000618852|WASF2;;ENSG00000184937|ENST00000452863|WT1;;nc|ENSG00000165821|Q9Y467|SALL2;;nc|ENSG00000150275|Q96QU1-4|PCDH15;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000184937|P19544-2|WT1;;nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000005483|Q8IZD2-7|KMT2E;;nc|ENSG00000204463|P46379-5|BAG6;;ENSG00000168066|ENST00000377390|SF1;;ENSG00000165821|ENST00000537235|SALL2;;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;;nc|ENSG00000182095|O15417-2|TNRC18;;nc|ENSG00000171634|Q12830|BPTF;;ENSG00000105323|ENST00000392006|HNRNPUL1;;nc|ENSG00000184937|P19544|WT1;;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;;nc|ENSG00000133816|O94851|MICAL2;;ENSG00000010017|ENST00000011619|RANBP9;;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;;nc|ENSG00000185090|Q5VSG8-3|MANEAL;;nc|ENSG00000184937|P19544-8|WT1;;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;;nc|ENSG00000150275|Q96QU1|PCDH15;;ENSG00000185090|ENST00000373045|MANEAL;;ENSG00000137710|ENST00000645495|RDX;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000107758|P16298-4|PPP3CB;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000005483|Q8IZD2-2|KMT2E;;nc|ENSG00000107758|P16298-3|PPP3CB;;ENSG00000183307|ENST00000331437|TMEM121B;;nc|ENSG00000126464|Q9ULL5-2|PRR12;;nc|ENSG00000137710|P35241-2|RDX;;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;nc|ENSG00000095539|Q9NTN9|SEMA4G;;ENSG00000171634|ENST00000306378|BPTF;;ENSG00000204463|ENST00000676615|BAG6;;ENSG00000122574|ENST00000242140|WIPF3;;nc|ENSG00000107758|P16298-2|PPP3CB;;ENSG00000182601|ENST00000331351|HS3ST4;;nc|ENSG00000184937|P19544-3|WT1;;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;;nc|ENSG00000137710|P35241-4|RDX;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;;ENSG00000184863|ENST00000401878|RBM33;;ENSG00000173273|ENST00000310430|TNKS;;ENSG00000150275|ENST00000644397|PCDH15;;nc|ENSG00000168066|Q15637-2|SF1;;ENSG00000171992|ENST00000307662|SYNPO 1.3160213629404705 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4590 22.378 315.0 150630.0 25 0 8979.3 29193 QGGEYPCEKTF 11 96 629.7762056889572 1257.5378584447144 2 629.7759887576103 MULTI CID FTMS 0 0 0 4588 123914.3984375 0.0118092801233645 23 -0.5729312896728516 2 Unmodified _QGGEYPCEKTF_ chr1:157767311-157768414|27|14.93|0.26|5.87|-|1|None,FCRL2|1 17.11289562659939 0.6791789249425932 5 [AG]AHDEAQQNA{M(Oxidation (M))|F} 12 10 + 62.507 0.0 0.0 4.9706 4.9706 59.064 0.0 0.0 0.0 0.1709779556855295 15.757659435244731 0.1709779556855295 0.0 0 0.8935078169319297 1.5228787452803376 0.805462187404089 0.4247425010840047 [AG]AHDEAQQNA{M(Oxidation (M))|F};[AG]AHDEQAQNA{M(Oxidation (M))|F};[QA]HDEAGAQNA{M(Oxidation (M))|F};[AG]AHDEAGAQNA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDEQAQNA{M(Oxidation (M))|F};{[QG]|[NA]}G[NS]HAGAE[PS]{M(Oxidation (M))|F};[AG]AHDEQA[AG]NA{M(Oxidation (M))|F};[AG]AHDEAQ[AG]NA{M(Oxidation (M))|F};[QA]HDEAGA[AG]NA{M(Oxidation (M))|F} 4.9706;4.9706;4.957;4.9216;4.6706;4.4718;4.3039;4.2471;4.2471;4.2335 -;-;-;-;-;-;-;-;-;- 2862 1 2.861 42596.2 1.0 916 3672 4588 SUDHL4_400M_050219_1,4590 SUDHL4_400M_050219_1,4590,QGGEYPCEKTF False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_1 4591 22.381 138.0 357080.0 25 0 95810.0 + + 8058 REVQTNDL 8 81 487.7487131695041 973.4828734058082 2 487.7487975955009 MULTI CID FTMS 0 0 0 4588 222627.828125 1.0 0 0.0 3 Unmodified _ENRSIQDL_ ENSG00000145425|ENST00000274065|RPS3A 26.88365393820708 0.4786498634179528 5 {[RE]|[WV]}VQTND{I|L} 8 -1 + 56.419 0.0 0.0 5.7956 5.7956 90.268 0.0 0.0 0.0 4.6040937697618745 40.34465464368084 4.6040937697618745 9.262137858390815 0 0.8807196863200843 0.0 0.0 0.4247425010840047 {[RE]|[WV]}VQTND{I|L};{[RE]|[WV]}V[AG]TND{I|L};{[RE]|[WV]}VQTGGD{I|L};{[TV]|[{I|L}S]}RQEND{I|L};{[RE]|[WV]}V[AG]TGGD{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}TND{I|L};{[RE]|[WV]}[KA]END{I|L};{[QS]|[NT]}[R{I|L}]END{I|L};{[TV]|[{I|L}S]}R[AG]END{I|L};{[TV]|[{I|L}S]}RQEGGD{I|L} 5.7956;4.8442;4.8442;4.0974;3.8983;3.8695;3.4607;3.2328;3.1459;3.1459 -;-;-;-;-;-;-;-;-;- 157 1 2.861 42846.6 1.0 917 3672 4588 SUDHL4_400M_050219_1,4591 SUDHL4_400M_050219_1,4591,ENRSIQDL False False REVQTNDL 22.380532 487.748797595501 978867.9375 4588.0 ENSG00000145425|ENST00000274065|RPS3A 4.3383528391520185 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4592 22.386 309.0 344350.0 25 0 41775.0 + 39399 VALALCLHLT 10 113 351.877080860485 1052.609413181655 3 351.8769714236259 MULTI CID FTMS 0 0 0 4588 186610.625 0.5825628398321442 -3 0.1118106842041015 4 Unmodified _VALALCLHLT_ REV__ENST00000471490.1_1_21:45542017-45544896:+|nuORF 14.838274106304384 0.5985701837916485 5 VAE{I|L} 4 -1 54.423 0.0 0.0 5.1703 0.0 0.0 0.0 637.355485063728 637.355485063728 41.65915253877881 0.0 0.0 0.0 0 0.4698565171985375 1.6989700043360187 0.3807196863200844 0.0 VAE{I|L} 5.1703 - 41 + 1 2.861 94841.9 1.0 918 3672 4588 SUDHL4_400M_050219_1,4592 SUDHL4_400M_050219_1,4592,VALALCLHLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4593 22.39 200.0 579490.0 25 0 144130.0 + -1 MQRRDDPAARMS 12 76 492.5664326487414 1474.6774685464245 3 492.5661498904228 MULTI CID FTMS 0 0 0 4588 158929.265625 0.9836706277288796 -1 0.0463294982910156 5 2 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))IC(Carbamidomethyl (C))YFTPRC(Carbamidomethyl (C))V_ nc|ENSG00000121774|Q07666-3|KHDRBS1;ENST00000307714.12_1_1:32479575-32503673:+|nuORF;ENSG00000121774|ENST00000327300|KHDRBS1;nc|ENSG00000121774|Q07666-2|KHDRBS1 2.6312355333042263 0.8627335947654684 5 SN 2 -1 15.041 0.0 0.0 1.0199 0.0 0.0 843.3658541906747 427.22751794986567 1270.5933721405404 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.3054621874040891 SN 1.0199 - 15 + 1 2.861 92443.6 1.0 919 3672 4588 SUDHL4_400M_050219_1,4593 SUDHL4_400M_050219_1,4593,LMICYFTPRCV False False MQRRDDPAARMS 22.389966 492.566149890423 1041630.3125 4588.0 nc|ENSG00000121774|Q07666-3|KHDRBS1;;ENST00000307714.12_1_1:32479575-32503673:+|nuORF;;ENSG00000121774|ENST00000327300|KHDRBS1;;nc|ENSG00000121774|Q07666-2|KHDRBS1 0.3091051578521728 3.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4594 22.4 552.0 205320.0 25 0 12851.0 -1 FRCQCPAGGAF 11 111 635.7763443136661 1269.538135694132 2 635.7756225466728 MULTI CID FTMS 0 0 0 4588 142196.640625 0.2954405800703532 -5 0.1570358276367187 6 2 Carbamidomethyl (C) _FRC(Carbamidomethyl (C))QC(Carbamidomethyl (C))PAGGAF_ ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3 24.020572477871973 0.5281922720044371 5 [NP]HDEAQQNA{M(Oxidation (M))|F} 11 -1 + 106.89 0.0 0.0 8.4195 8.4195 91.222 0.0 0.0 0.0 5.740312677277188 16.57577319177794 5.740312677277188 5.740312677277188 0 0.9247425010840048 1.0 1.2510912013506126 1.5189301784845295 [NP]HDEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};[NP]HDEAQQGGA{M(Oxidation (M))|F};[NP]HDEA[AG]QNA{M(Oxidation (M))|F};[NP]HDEAQ[AG]NA{M(Oxidation (M))|F};[HD][NP]EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F} 8.4195;7.9673;7.8849;7.7004;7.7004;7.7004;7.4403;7.2483;7.2483;7.2483 -;-;-;-;-;-;-;-;-;- 3937 1 2.861 89708.8 1.0 920 3672 4588 SUDHL4_400M_050219_1,4594 SUDHL4_400M_050219_1,4594,FRCQCPAGGAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4595 22.413 783.0 95987.0 25 0 8500.3 + 37590 TLKDQPSAY 9 128 511.7613801224678 0 511.7619506716728 PEAK CID FTMS 0 0 0 4588 96349.09375 0.9723027348794496 -1 0.0463294982910156 7 Unmodified _TLKDQPSAY_ ENSG00000123297|ENST00000652027|TSFM;nc|ENSG00000123297|P43897-2|TSFM;nc|ENSG00000123297|P43897-3|TSFM;nc|ENSG00000123297|P43897-4|TSFM 36.506200033944 0.0788933506710822 5 A 1 8 15.485 0.0 0.0 1.5159 0.0 0.0 769.3968314345857 178.0514315240844 947.44826295867 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + A 1.5159 + + 203 + 1 2.861 64017.9 1.0 921 3672 4588 SUDHL4_400M_050219_1,4595 SUDHL4_400M_050219_1,4595,TLKDQPSAY True True TLKDQPSAY 22.413216 511.761950671673 378947.125 4588.0 nc|ENSG00000123297|P43897-4|TSFM;;nc|ENSG00000123297|P43897-2|TSFM;;ENSG00000123297|ENST00000652027|TSFM;;nc|ENSG00000123297|P43897-3|TSFM 6.217155933380127 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4597 22.43 800.0 72315.0 25 0 16236.0 -1 0 42 1003.7538532833996 3008.239730450399 3 1004.087817370892 MULTI CID FTMS 0 0 0 4596 182249.484375 0.961049375946458 -1 0.0473880767822265 1 5 {M(Oxidation (M))|F}G 2 -1 8.5835 0.0 0.0 0.28533 0.0 0.0 1547.5512061357488 1253.5890543703842 2801.140260506133 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.28533 - 5 + 1 2.861 73980.1 0.5 922 3673 4596 SUDHL4_400M_050219_1,4597 SUDHL4_400M_050219_1,4597, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4598 22.444 800.0 53012.0 25 0 11494.0 -1 0 62 674.5136047850377 3367.5316415921884 5 674.7128784060478 MULTI CID FTMS 0 0 0 4596 62608.6328125 0.991660499135102 3 -0.0697288513183593 2 5 HCCGE 5 -1 12.703 0.0 0.0 0.37722 0.0 0.0 1304.6236670889718 1530.6730508059095 2835.2967178948816 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 HCCGE 0.37722 - 24 + 1 2.861 38422.8 0.449999988079071 923 3673 4596 SUDHL4_400M_050219_1,4598 SUDHL4_400M_050219_1,4598, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4599 22.452 410.0 125410.0 25 0 15830.0 + -1 AAGPISERNQD 11 83 600.2869766160244 1198.5594002988487 2 600.2870971560478 MULTI CID FTMS 0 0 0 4596 99454.078125 0.6968021303439914 -2 0.0937175750732421 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAGPISERNQD_ ENSG00000143368|ENST00000271628|SF3B4 32.89776655970281 0.3218023389984559 5 [PS]GP{I|L}SE 7 -1 58.989 0.0 0.0 4.9217 0.0 0.0 0.0 528.2193087213499 528.2193087213499 39.94804792093738 0.0 0.0 0.0 0 1.6549471895720984 0.9208187539523752 0.0 0.0 [PS]GP{I|L}SE 4.9217 - 426 + 1 2.861 44569.1 1.0 924 3673 4596 SUDHL4_400M_050219_1,4599 SUDHL4_400M_050219_1,4599,AAGPISERNQD False False AAGPISERNQD 22.451638 600.287097156048 742214.375 4596.0 ENSG00000143368|ENST00000271628|SF3B4 7.134452819824219 2.0 True 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4602 22.472 800.0 117480.0 25 0 19693.0 -1 0 81 603.2775709444666 3011.3514723893327 5 603.6786376833916 MULTI CID FTMS 0 0 0 4601 82446.2265625 0.3401920398717542 -5 0.1725635528564453 1 5 Q 1 -1 7.4743 0.0 0.0 0.2482 0.0 0.0 2318.0712590369617 562.2016935853832 2880.2729526223447 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 Q 0.2482 - 60 + 1 2.861 77198.2 0.6299999952316284 925 3675 4601 SUDHL4_400M_050219_1,4602 SUDHL4_400M_050219_1,4602, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4603 22.478 347.0 211180.0 25 0 32551.0 + 19966 LIHEGENSY 9 94 531.2491699754676 1060.483787017735 2 531.2487670779228 MULTI CID FTMS 0 0 0 4601 136829.25 0.6659268047745578 -3 0.0897960662841796 2 Unmodified _LIHEGENSY_ ENSG00000197714|ENST00000360338|ZNF460;nc|ENSG00000197714|Q14592-2|ZNF460 37.97399986684836 0.0865783450051559 5 {I|L}{I|L}HEWNSY 8 2 + 55.169 0.0 0.0 5.2023 5.2023 88.49 0.0 0.0 0.0 13.231235680268624 36.981848314185626 13.231235680268624 9.262137858390815 0 1.0 1.5228787452803376 0.0 0.0 {I|L}{I|L}HEWNSY;{I|L}{I|L}HEWGGSY;{I|L}{I|L}HE{[DA]|[EG]}NSY;{I|L}{I|L}HE{[DA]|[EG]}GGSY;{[YC]|[HE]}GE{I|L}{I|L}NSY;{[YC]|[HE]}{I|L}{I|L}WNSY;{[YC]|[HE]}GEN{I|L}{I|L}SY;{[YC]|[HE]}GE{I|L}{I|L}GGSY;{[{M(Oxidation (M))|F}C]|[YS]}{[DS]|[MA]|[CV]|TT}{I|L}{I|L}NSY;{[YC]|[HE]}{I|L}{I|L}{[DA]|[EG]}NSY 5.2023;4.3289;4.3289;3.4606;3.425;3.0158;2.6912;2.5567;2.3906;2.1424 -;-;+;-;-;-;-;-;-;- + 218 1 2.861 63445.1 1.0 926 3675 4601 SUDHL4_400M_050219_1,4603 SUDHL4_400M_050219_1,4603,LIHEGENSY True True LIHEGENSY 22.478267 531.248767077923 908855.4375 4601.0 nc|ENSG00000197714|Q14592-2|ZNF460;;ENSG00000197714|ENST00000360338|ZNF460 7.567299842834473 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4604 22.483 252.0 197790.0 25 0 34697.0 -1 0 71 549.2839152365607 548.2766387699606 1 550.2880737185478 MULTI CID FTMS 0 0 0 4601 212844.90625 0.9479529872987376 2 -0.0602798461914062 3 5 Y 1 -1 11.42 0.0 0.0 2.0829 0.0 0.0 367.20196028050594 0.0 367.20196028050594 0.0 7.925133260145909 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.0829 - 8 + 1 2.861 42856.1 1.0 927 3675 4601 SUDHL4_400M_050219_1,4604 SUDHL4_400M_050219_1,4604, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4606 22.49 166.0 454530.0 25 0 53812.0 + 14755 ILDESHERV 9 95 366.5244874903889 1096.5516330713667 3 366.5240356326103 MULTI CID FTMS 0 0 0 4605 152118.3125 0.2831389507902879 -2 0.0313167572021484 1 Unmodified _ILDESHERV_ ENSG00000128534|ENST00000249299|LSM8 28.49450938151212 0.1686335738423394 5 {I|L}{I|L}DESHERV 9 0 + 66.781 0.0 0.0 6.0901 6.0901 94.351 0.0 0.0 0.0 53.13608784304506 8.16061246681059 8.16061246681059 66.78125037489593 0 0.0 1.6989700043360187 0.5 0.0 + + {I|L}{I|L}DESHERV 6.0901 + + 75 + 1 2.858 65458.9 1.0 928 3676 4605 SUDHL4_400M_050219_1,4606 SUDHL4_400M_050219_1,4606,ILDESHERV False True ILDESHERV 22.490079 366.52403563261 2258991.5 4605.0 ENSG00000128534|ENST00000249299|LSM8 5.747764428456624 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4607 22.498 424.0 196310.0 25 0 39640.0 -1 0 91 753.8453066988028 3011.352120928811 4 753.8434936404228 MULTI CID FTMS 0 0 0 4605 51892.48046875 0.2424421136312785 -4 0.1171169281005859 2 5 SAA{[SA]|[TG]}QC(Carbamidomethyl (C))GT[QT] 11 -1 37.374 0.0 0.0 1.2411 0.0 0.0 1930.855735286036 0.0 1930.855735286036 0.0 15.679487700427778 0.0 0.0 0 0.0 0.0 1.8441876774005248 0.7742275032520141 SAA{[SA]|[TG]}QC(Carbamidomethyl (C))GT[QT] 1.2411 - 1107 + 1 2.858 64960.2 1.0 929 3676 4605 SUDHL4_400M_050219_1,4607 SUDHL4_400M_050219_1,4607, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4608 22.502 237.0 340340.0 25 0 54418.0 + 17639 KPTAAFHLL 9 89 499.2933640303591 996.5721751275182 2 499.2930786013603 MULTI CID FTMS 0 0 0 4605 265952.96875 1.0 0 0.0 3 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 5 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3534243462435 667.3534243462435 23.521825181113623 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 41 + 1 2.858 67539.4 1.0 930 3676 4605 SUDHL4_400M_050219_1,4608 SUDHL4_400M_050219_1,4608,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4609 22.516 800.0 74832.0 25 0 4703.3 -1 0 61 624.7866238398564 2495.1173894930253 4 625.2879516482353 MULTI CID FTMS 0 0 0 4605 76752.5625 1.0 0 0.0 4 5 DD 2 -1 20.969 0.0 0.0 0.84041 0.0 0.0 728.3368160821393 1533.701106592417 2262.0379226745563 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 DD 0.84041 - 21 + 1 2.858 49950.3 0.4600000083446502 931 3676 4605 SUDHL4_400M_050219_1,4609 SUDHL4_400M_050219_1,4609, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4611 22.521 40.0 1093200.0 25 0 62434.0 27046 PEQNDRTPL 9 77 535.2676210773852 1068.5206892215704 2 535.2674438357353 MULTI CID FTMS 0 0 0 4610 1444993.5 0.840307859363525 3 -0.0857982635498046 1 Unmodified _PEQNDRTPL_ ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;ENST00000544562.5_1_14:23067206-23078652:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4 15.847184025352805 0.4077185912009129 5 [EP]QDTR[NP]{I|L} 9 3 + 37.668 0.0 0.0 3.5252 3.5252 83.562 0.0 0.0 0.0 22.18310920309805 6.962724883926661 6.962724883926661 9.208187539523756 0 0.0 0.0 0.6747425010840047 0.3807196863200844 [EP]QDTR[NP]{I|L};[EP][AG]DTR[NP]{I|L};{[QN]|[E{I|L}]|[KN]}[KQ]TDQ[HA];{[QN]|[E{I|L}]|[KN]}[KQ]TD[AG][HA];{[QD]|[EN]|[WG]|[KD]|[RS]}RRTW[HA] 3.5252;2.6634;2.5415;1.6797;0.34932 -;-;-;-;- 104 + 1 2.858 39408.5 1.0 932 3677 4610 SUDHL4_400M_050219_1,4611 SUDHL4_400M_050219_1,4611,PEQNDRTPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4612 22.524 184.0 716170.0 25 0 92246.0 -1 0 50 644.7783143660586 2575.084151597834 4 645.0290405154228 MULTI CID FTMS 0 0 0 4610 457275.0 0.746436232213043 4 -0.0896263122558593 2 5 D[RD]M 4 -1 17.747 0.0 0.0 0.6892 0.0 0.0 1731.7185614682537 323.1525057428344 2054.871067211088 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.3807196863200844 D[RD]M 0.6892 - 13 + 1 2.858 106363.8 1.0 933 3677 4610 SUDHL4_400M_050219_1,4612 SUDHL4_400M_050219_1,4612, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4613 22.534 539.0 121810.0 25 0 11292.0 + + -1 VEGEGEEEGEEY 12 94 678.2600436574929 1354.5055343817858 2 678.2595092654228 MULTI CID FTMS 0 0 0 4610 108037.703125 0.2721001246611643 -4 0.1026878356933593 3 Oxidation (M) _GEEEEEM(Oxidation (M))RMAE_ ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000123416|ENST00000336023|TUBA1B;nc|ENSG00000123416|P68363-2|TUBA1B 17.11289562659939 0.6791789249425932 5 {[DA]|[EG]}EEGEVEGE[YE] 12 -1 + 79.631 0.0 0.0 5.879 5.879 84.517 0.0 0.0 0.0 10.433119539801185 7.447274948966935 7.447274948966935 3.762874945799752 0 0.3054621874040891 0.958607314841775 2.2198565171985374 0.0 {[DA]|[EG]}EEGEVEGE[YE];{[DA]|[EG]}EGEEVEGE[YE];{[DA]|[EG]}EEGVEEGE[YE];{[DA]|[EG]}EEGEEVGE[YE];{[DA]|[EG]}EGEVEEGE[YE];{[DA]|[EG]}EGEEEVGE[YE];EEGEGEVEGE[YE];EEGGEEVEGE[YE];{[DA]|[EG]}GEEEVEGE[YE];EEGEGVEEGE[YE] 5.879;5.6012;5.4533;5.4039;5.1755;5.1261;5.1087;4.8309;4.804;4.683 -;-;-;-;-;-;-;-;-;- 5390 1 2.858 53175.9 1.0 934 3677 4610 SUDHL4_400M_050219_1,4613 SUDHL4_400M_050219_1,4613,GEEEEEMRMAE False False VEGEGEEEGEEY 22.533761 678.259509265423 2099100.75 4610.0 ENSG00000167552|ENST00000301071|TUBA1A;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;ENSG00000123416|ENST00000336023|TUBA1B;;nc|ENSG00000123416|P68363-2|TUBA1B 2.2600257198015847 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4614 22.538 209.0 391870.0 25 0 174680.0 -1 0 68 502.2836746422412 501.2763981756412 1 502.2836486697197 MULTI CID FTMS 0 0 0 4610 271100.8125 0.7667477203217588 4 -0.0896263122558593 4 5 {I|L} 1 -1 11.783 0.0 0.0 2.3505 0.0 0.0 370.1814865318896 0.0 370.1814865318896 0.0 1.4041330478784708 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.3505 - 9 + 1 2.858 68625.4 1.0 935 3677 4610 SUDHL4_400M_050219_1,4614 SUDHL4_400M_050219_1,4614, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4615 22.544 375.0 313810.0 25 0 25822.0 + 12196 GQRQVGVGY 9 117 482.25477351628666 962.4949940993732 2 482.2545654177666 MULTI CID FTMS 0 0 0 4610 192953.296875 0.2959348806766892 -6 0.1964054107666015 5 Unmodified _GQRQVGVGY_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 54.773552608820026 0.0299037012502309 5 {[QG]|[NA]}RQVGVGY 9 0 + 52.951 0.0 0.0 5.5014 5.5014 86.145 0.0 0.0 0.0 2.921948415899457 36.75280175098663 2.921948415899457 6.7609125905568135 0 1.25 0.0 0.0 0.7931576817365437 + + {[QG]|[NA]}RQVGVGY;{[QG]|[NA]}RQVGGVY;{[QG]|[NA]}R[AG]VGVGY;{[QG]|[NA]}RQGVVGY;[VG]{NN|[MP]|[D{I|L}]|[EV]}{I|L}AGVGY;{[QG]|[NA]}R[AG]VGGVY;{[QG]|[NA]}RQGVGVY;{[QG]|[NA]}R[AG]GVVGY;{[QG]|[NA]}RQVNVY;[TP]RDRVGY 5.5014;4.799;4.5447;4.5054;4.0355;3.8423;3.8029;3.5487;3.5031;3.4802 +;-;-;-;-;-;-;-;-;- + 640 1 2.858 94183.0 1.0 936 3677 4610 SUDHL4_400M_050219_1,4615 SUDHL4_400M_050219_1,4615,GQRQVGVGY True True GQRQVGVGY 22.544459 482.254565417767 5922651.0 4610.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 3.746123870213826 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4617 22.561 800.0 115780.0 25 0 33011.0 -1 0 44 1165.467314331838 3493.380113595714 3 1165.800219714642 MULTI CID FTMS 0 0 0 4616 208952.5625 0.5211750082562793 -4 0.0928421020507812 1 5 G 1 -1 6.9897 0.0 0.0 0.20008 0.0 0.0 2147.7612214647665 1285.5811694373378 3433.3423909021044 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20008 - 4 + 1 2.858 83292.1 0.5 937 3678 4616 SUDHL4_400M_050219_1,4617 SUDHL4_400M_050219_1,4617, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4618 22.566 298.0 246890.0 25 0 25053.0 39570 VCPPVPRPS 9 80 476.2576629869603 950.5007730407208 2 476.2573425173759 MULTI CID FTMS 0 0 0 4616 113361.0625 0.8572745903576419 -2 0.0615253448486328 2 Unmodified _VCPPVPRPS_ ENSG00000187033|ENST00000335556|SAMD7 9.38312468134398 0.5871240394367778 5 {[DS]|[MA]|[CV]|TT}PPP 5 4 40.005 0.0 0.0 4.2088 0.0 0.0 0.0 454.23056970767817 454.23056970767817 38.01538440272459 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {[DS]|[MA]|[CV]|TT}PPP 4.2088 - 32 + 1 2.858 63259.7 1.0 938 3678 4616 SUDHL4_400M_050219_1,4618 SUDHL4_400M_050219_1,4618,VCPPVPRPS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4619 22.57 168.0 527720.0 25 0 227500.0 -1 0 71 492.2993490325915 491.29207256599153 1 492.2990600466728 MULTI CID FTMS 0 0 0 4616 300504.78125 0.7797876199169964 -4 0.0928421020507812 3 5 H 1 -1 0.9691 0.0 0.0 0.19726 0.0 0.0 145.1981222259509 206.00960718326408 351.2077294092149 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.19726 - 2 + 1 2.858 73010.6 1.0 939 3678 4616 SUDHL4_400M_050219_1,4619 SUDHL4_400M_050219_1,4619, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4621 22.579 402.0 157410.0 25 0 13345.0 + 45165 YQGPPPQQGY 10 97 567.7646704440348 1133.5147879548697 2 567.7659789919853 MULTI CID FTMS 0 0 0 4620 123823.5859375 0.9061474150640038 -4 0.1139965057373046 1 Unmodified _YQGPPPQQGY_ ENSG00000141380|ENST00000415083|SS18;ENST00000580958.5_1_18:23598320-23615185:-|nuORF;nc|ENSG00000141380|Q15532-2|SS18 69.10491478415734 0.0189654488676922 5 [YQ]KGDPP 7 6 43.682 0.0 0.0 3.8536 0.0 0.0 0.0 345.12224580082574 345.12224580082574 18.632199727462776 0.0 0.0 0.0 0 1.305462187404089 0.0 0.3807196863200844 0.5629529932484498 [YQ]KGDPP 3.8536 - 846 1 2.858 54238.3 1.0 940 3679 4620 SUDHL4_400M_050219_1,4621 SUDHL4_400M_050219_1,4621,YQGPPPQQGY True True YQGPPPQQGY 22.579367 567.765978991985 1569438.75 4620.0 ENSG00000141380|ENST00000415083|SS18;;ENST00000580958.5_1_18:23598320-23615185:-|nuORF;;nc|ENSG00000141380|Q15532-2|SS18 7.376321792602539 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4622 22.582 144.0 597230.0 25 0 63523.0 + 32139 RVPPPPQSV 9 81 488.7829437747218 975.5513346162436 2 488.7824279665947 MULTI CID FTMS 0 0 0 4620 386705.71875 0.4336654534138243 -5 0.1179924011230468 2 Unmodified _RVPPPPQSV_ ENSG00000160691|ENST00000448116|SHC1;nc|ENSG00000160691|P29353-2|SHC1;nc|ENSG00000160691|P29353-3|SHC1;nc|ENSG00000160691|P29353-5|SHC1;nc|ENSG00000160691|P29353-7|SHC1;nc|ENSG00000160691|P29353|SHC1 40.23920728925047 0.0741434193262949 5 [RV]PPP[QP]SV 9 0 + 62.628 0.0 0.0 6.4198 6.4198 94.21 0.0 0.0 0.0 16.31105604145162 49.5290257095165 16.31105604145162 24.94727494896693 0 1.873712505420024 1.154901959985743 0.0 0.0 + + [RV]PPP[QP]SV;[RV][YK][QP]SV;[RV]{[CA]|SS}S[RV]SV;[RV][MT]KKDV;[QP]P{[HG]|PP}[RV]SV;[QP][YK][RV]SV 6.4198;3.8625;3.4339;3.1957;0.5983;0.42332 +;-;-;-;-;- + 154 1 2.858 69789.1 1.0 941 3679 4620 SUDHL4_400M_050219_1,4622 SUDHL4_400M_050219_1,4622,RVPPPPQSV True True RVPPPPQSV 22.582254 488.782427966595 10428981.0 4620.0 nc|ENSG00000160691|P29353-5|SHC1;;nc|ENSG00000160691|P29353|SHC1;;nc|ENSG00000160691|P29353-2|SHC1;;nc|ENSG00000160691|P29353-7|SHC1;;nc|ENSG00000160691|P29353-3|SHC1;;ENSG00000160691|ENST00000448116|SHC1 9.40402348836263 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4623 22.588 308.0 351210.0 25 0 72490.0 -1 0 137 382.16784221076136 381.1605657441614 1 382.1679870486259 MULTI CID FTMS 0 0 0 4620 130223.421875 0.0721043552582693 11 -0.2506122589111328 3 5 HR 2 -1 14.871 0.0 0.0 3.9014 0.0 0.0 69.98888713263638 0.0 69.98888713263638 0.0 3.4507851136789025 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 HR 3.9014 - 30 + 1 2.858 86847.0 1.0 942 3679 4620 SUDHL4_400M_050219_1,4623 SUDHL4_400M_050219_1,4623, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4624 22.602 800.0 53070.0 25 0 2077.6 -1 0 62 871.6476196283882 3482.5613726471524 4 872.1501953005791 MULTI CID FTMS 0 0 0 4620 73015.046875 0.820375925804986 1 -0.0320816040039062 4 5 G 1 -1 4.6041 0.0 0.0 0.1322 0.0 0.0 2344.5261686450026 1077.9644259088502 3422.490594553853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.1322 - 7 + 1 2.858 39621.2 0.4300000071525574 943 3679 4620 SUDHL4_400M_050219_1,4624 SUDHL4_400M_050219_1,4624, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4627 22.613 237.0 478450.0 25 0 40767.0 -1 0 105 383.2398313213845 764.4651097095691 2 383.2398864626884 MULTI CID FTMS 0 0 0 4626 204231.609375 0.7325430623572906 -3 0.0610599517822265 1 5 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}HR 6 -1 + 52.725 0.0 0.0 6.897 6.897 96.181 0.0 0.0 0.0 41.48834371105593 17.74735947860492 17.74735947860492 52.72546876525617 0 0.3807196863200844 2.0 0.0 0.3054621874040891 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}HR 6.897 - 38 + 1 2.858 95632.5 1.0 944 3681 4626 SUDHL4_400M_050219_1,4627 SUDHL4_400M_050219_1,4627, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4630 22.627 436.0 161380.0 25 0 24286.0 + 39592 VDALLHHTSV 10 95 546.2975412397817 1090.580529546363 2 546.2981445193291 MULTI CID FTMS 0 0 0 4629 91057.171875 0.7349125714352731 1 -0.0518779754638671 1 Unmodified _VDALLHHTSV_ REV__ENSG00000129292|ENST00000395386|PHF20L1 30.63653989081413 0.2803493085145199 5 [VS]TQKE{I|L}T 8 -1 38.123 0.0 0.0 3.4956 0.0 0.0 0.0 201.08947665013207 201.08947665013207 26.229494892538693 0.0 0.0 0.0 0 1.0 0.958607314841775 0.4247425010840047 0.0 [VS]TQKE{I|L}T 3.4956 - 762 1 2.858 58468.3 1.0 945 3683 4629 SUDHL4_400M_050219_1,4630 SUDHL4_400M_050219_1,4630,VDALLHHTSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4631 22.641 800.0 108450.0 25 0 15918.0 -1 ISPSRMPQPPN 11 112 620.3133614553385 1238.612169977477 2 620.3141967654228 MULTI CID FTMS 0 0 0 4629 82588.6796875 0.2534537713848565 -81 1.293169021606445 2 Oxidation (M) _ISPSRM(Oxidation (M))PQPPN_ ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP 18.373094154950223 0.6529654022026722 5 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 64.81 19.965 5.0394 5.2325 5.2325 59.944 0.0 0.0 0.0 0.0 49.47025986567944 0.0 0.0 0 2.274227503252014 0.0 0.0 1.1535984316004222 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 5.2325 - 1625 + 1 2.858 72074.8 0.6000000238418579 946 3683 4629 SUDHL4_400M_050219_1,4631 SUDHL4_400M_050219_1,4631,ISPSRMPQPPN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4632 22.654 800.0 87730.0 25 0 7822.7 -1 0 49 859.3685237761096 2575.0837419285285 3 859.3680908083916 MULTI CID FTMS 0 0 0 4629 72796.078125 0.5528079784626786 8 -0.2399635314941406 3 5 NW 2 -1 12.959 0.0 0.0 0.50324 0.0 0.0 1699.6974637076285 572.2217501275999 2271.919213835228 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 NW 0.50324 - 14 + 1 2.858 55921.6 0.5 947 3683 4629 SUDHL4_400M_050219_1,4632 SUDHL4_400M_050219_1,4632, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4633 22.668 800.0 38056.0 25 0 10104.0 -1 0 32 1160.13514315851 3477.38360007573 3 1160.470019519329 MULTI CID FTMS 0 0 0 4629 63182.546875 0.8846056917594401 -1 0.0039310455322265 4 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 2.858 37138.8 0.3899999856948852 948 3683 4629 SUDHL4_400M_050219_1,4633 SUDHL4_400M_050219_1,4633, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4635 22.686 800.0 104120.0 25 0 6889.1 -1 FRCQCPAGGAF 11 109 635.7763443136661 1269.538135694132 2 635.7766601443291 MULTI CID FTMS 0 0 0 4634 135490.828125 0.2815079785255125 7 -0.1880855560302734 1 2 Carbamidomethyl (C) _FRC(Carbamidomethyl (C))QC(Carbamidomethyl (C))PAGGAF_ ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3 18.1463463914782 0.6576820063886638 5 [AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F} 12 -1 + 89.892 0.0 0.0 7.0807 7.0807 85.366 0.0 0.0 0.0 1.8406018872695569 16.611814434466183 1.8406018872695569 1.8406018872695569 0 0.8494850021680094 1.6989700043360187 0.6861818737241735 0.8494850021680094 [AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};[NP]HDEAQQNA{M(Oxidation (M))|F};[HD][NP]EAQQNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F} 7.0807;6.9357;6.7389;6.3685;6.3641;6.3641;6.3641;6.2167;6.2167;6.2167 -;-;-;-;-;-;-;-;-;- 2347 1 2.859 66932.9 0.75 949 3684 4634 SUDHL4_400M_050219_1,4635 SUDHL4_400M_050219_1,4635,FRCQCPAGGAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4636 22.7 800.0 144560.0 25 0 8118.6 25987 NLSAYFERAAD 11 134 628.799542230906 1255.584531528612 2 628.8005248904228 MULTI CID FTMS 0 0 0 4634 124458.7734375 0.9033937141168228 -1 0.0518779754638671 2 Unmodified _NLSAYFERAAD_ ENSG00000108861|ENST00000226004|DUSP3;nc|ENSG00000108861|P51452-2|DUSP3 24.99096001346401 0.505407273373304 5 [KQ]EYAC(Carbamidomethyl (C))[KC]VQ 10 10 + 46.365 0.0 0.0 3.6927 3.6927 79.62 0.0 0.0 0.0 3.177418734074564 22.05805019124324 3.177418734074564 5.2405533714025765 0 0.8935078169319297 0.0 0.2887254899964357 0.7887254899964358 [KQ]EYAC(Carbamidomethyl (C))[KC]VQ;E[KQ]Y{[CA]|SS}SKHY;E[KQ]Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}KHY;E[KQ]Y{[CA]|SS}SKWN;E[KQ]Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}KWN;E[KQ]Y{[CA]|SS}SKYH;E[KQ]Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}KYH;[Q{I|L}]T[YN]C(Carbamidomethyl (C))[KC]VQ;EV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SKHY;EV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SKWN 3.6927;3.2753;3.2346;3.1481;3.1074;3.0453;3.0046;2.5064;2.1928;2.0656 -;-;-;-;-;-;-;-;-;- 1453 1 2.859 88823.2 0.5899999737739563 950 3684 4634 SUDHL4_400M_050219_1,4636 SUDHL4_400M_050219_1,4636,NLSAYFERAAD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4637 22.714 800.0 114980.0 25 0 14728.0 + 2484 AQYEEIAQR 9 102 554.2756018177704 1106.5366507023407 2 554.2751342654228 MULTI CID FTMS 0 0 0 4634 103815.1640625 1.0 0 0.0 3 Unmodified _AQYEEIAQR_ CON__ENSEMBL:ENSBTAP00000038253;CON__P02538;CON__P04259;CON__P19013;CON__P35908;CON__P35908v2;CON__P48668;ENSG00000170465|ENST00000252250|KRT6C;ENSG00000170477|ENST00000551956|KRT4;ENSG00000172867|ENST00000309680|KRT2;ENSG00000185069|ENST00000332411|KRT76;ENSG00000185479|ENST00000252252|KRT6B;ENSG00000205420|ENST00000330722|KRT6A;ENST00000553087.1_1_12:52864282-52865086:-|nuORF 51.629811660486645 0.0367964933207742 5 [QA]YEE{I|L}AQR 9 0 [QA] + + 55.442 17.435 8.7571 5.0104 5.0104 59.24 0.0 0.0 0.0 0.0 31.2165320881506 0.0 0.0 0 0.8494850021680094 0.0 0.7134679910804405 0.3807196863200844 + + [QA]YEE{I|L}AQR 5.0104 + + 200 + 1 2.859 72808.1 0.5400000214576721 951 3684 4634 SUDHL4_400M_050219_1,4637 SUDHL4_400M_050219_1,4637,AQYEEIAQR True True AQYEEIAQR 22.713689 554.275134265423 448132.25 4634.0 ENSG00000185479|ENST00000252252|KRT6B;;P02538;;ENST00000553087.1_1_12:52864282-52865086:-|nuORF;;P48668;;ENSG00000170465|ENST00000252250|KRT6C;;P35908v2;;ENSG00000170477|ENST00000551956|KRT4;;ENSEMBL:ENSBTAP00000038253;;P04259;;ENSG00000205420|ENST00000330722|KRT6A;;ENSG00000172867|ENST00000309680|KRT2;;P35908;;P19013;;ENSG00000185069|ENST00000332411|KRT76 6.364055633544922 2.0 True 9.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 4638 22.718 230.0 283880.0 25 0 46232.0 + 45193 YQTDPSGTY 9 85 516.2200602108373 1030.4255674884746 2 516.2208740115166 MULTI CID FTMS 0 0 0 4634 104141.09375 0.7452909064742956 -1 0.0518779754638671 4 Unmodified _YQTDPSGTY_ ENSG00000101182|ENST00000370873|PSMA7;ENSG00000154611|ENST00000415576|PSMA8;ENST00000484488.5_1_20:60711915-60714832:-|nuORF;nc|ENSG00000101182|O14818-2|PSMA7;nc|ENSG00000154611|Q8TAA3-2|PSMA8;nc|ENSG00000154611|Q8TAA3|PSMA8 15.847184025352805 0.4077185912009129 5 TY 2 7 18.826 0.0 0.0 1.827 0.0 0.0 748.3043039160121 0.0 748.3043039160121 0.0 8.82576888900239 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + TY 1.827 + + 116 + 1 2.859 54177.1 1.0 952 3684 4634 SUDHL4_400M_050219_1,4638 SUDHL4_400M_050219_1,4638,YQTDPSGTY False True YQTDPSGTY 22.718026 516.220874011517 652072.75 4634.0 chr18:26158244-26178830|21|13.24|0.62|4.42|+|0|PSMA8,PSMA8|1;;nc|ENSG00000154611|Q8TAA3|PSMA8;;nc|ENSG00000101182|O14818-2|PSMA7;;ENSG00000101182|ENST00000370873|PSMA7;;ENSG00000154611|ENST00000415576|PSMA8;;ENST00000484488.5_1_20:60711915-60714832:-|nuORF;;nc|ENSG00000154611|Q8TAA3-2|PSMA8 2.634509801864624 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4640 22.734 800.0 103860.0 25 0 21251.0 -1 0 66 603.2775709444666 3011.3514723893327 5 603.4791137576103 MULTI CID FTMS 0 0 0 4639 110374.3984375 0.4476712034816132 5 -0.1022167205810546 1 5 YT[QA][DP] 6 -1 7.5969 0.0 0.0 0.25228 0.0 0.0 2318.067489090308 0.0 2318.067489090308 0.0 1.5661181611831951 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.5 YT[QA][DP] 0.25228 - 78 + 1 2.859 68733.7 0.5899999737739563 953 3685 4639 SUDHL4_400M_050219_1,4640 SUDHL4_400M_050219_1,4640, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4641 22.747 715.0 351740.0 25 0 97614.0 -1 0 76 1154.804379394752 3461.391308784456 3 1155.137499988079 MULTI CID FTMS 0 0 0 4639 518934.21875 0.2571748456817273 -7 0.1735458374023437 2 5 Q{M(Oxidation (M))|F}TAT 5 -1 15.877 0.0 0.0 0.45869 0.0 0.0 2240.8019051215542 669.3165987604124 2910.1185038819667 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8252574989159953 0.0 Q{M(Oxidation (M))|F}TAT 0.45869 - 255 + 1 2.859 205786.9 1.0 954 3685 4639 SUDHL4_400M_050219_1,4641 SUDHL4_400M_050219_1,4641, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4642 22.753 355.0 233950.0 25 0 34001.0 + 20130 LKLWYNHIAY 10 82 440.90664848214647 1319.6981160466394 3 440.9065734744072 MULTI CID FTMS 0 0 0 4639 153729.5625 1.0 0 0.0 3 Unmodified _LKLWYNHIAY_ ENSG00000136802|ENST00000372600|LRRC8A 5.783430956126388 0.6998847395148697 5 AY 2 8 29.024 0.0 0.0 2.1993 0.0 0.0 1067.5871979331612 0.0 1067.5871979331612 0.0 18.935078169319297 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + AY 2.1993 + + 40 + 1 2.859 72262.3 1.0 955 3685 4639 SUDHL4_400M_050219_1,4642 SUDHL4_400M_050219_1,4642,LKLWYNHIAY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4644 22.761 266.0 244450.0 25 0 57375.0 + 2399 AQPGQSQVSY 10 93 532.7548969809284 1063.495241028657 2 532.7549926638603 MULTI CID FTMS 0 0 0 4643 131240.4375 0.6132706544527351 4 -0.0670299530029296 1 Unmodified _AQPGQSQVSY_ ENSG00000049323|ENST00000404816|LTBP1;nc|ENSG00000049323|Q14766-2|LTBP1;nc|ENSG00000049323|Q14766-3|LTBP1;nc|ENSG00000049323|Q14766-4|LTBP1;nc|ENSG00000049323|Q14766-5|LTBP1 9.38312468134398 0.6832340498775793 5 [AG][PG]SQ[QA]VSY 11 3 [AG][PG]SQ[QA]V + + 20.969 -11.83 -1.4874 1.9717 1.9717 52.886 0.0 0.0 0.0 0.0 1.8444719792741893 0.0 0.0 0 0.0 0.0 0.0 0.0 [AG][PG]SQ[QA]VSY 1.9717 - 153 + 1 2.859 55113.5 1.0 956 3686 4643 SUDHL4_400M_050219_1,4644 SUDHL4_400M_050219_1,4644,AQPGQSQVSY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4645 22.765 203.0 251360.0 25 0 79709.0 -1 0 72 540.2319754236033 539.2246989570033 1 540.2314330935478 MULTI CID FTMS 0 0 0 4643 165641.4375 0.8444505231767911 -3 0.1367721557617187 2 5 Y 1 -1 12.764 0.0 0.0 2.3671 0.0 0.0 358.1499441736033 0.0 358.1499441736033 0.0 3.0984473981584024 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.3671 - 15 + 1 2.859 46863.4 1.0 957 3686 4643 SUDHL4_400M_050219_1,4645 SUDHL4_400M_050219_1,4645, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4646 22.771 358.0 249170.0 25 0 65233.0 41309 VPHVVHIT 8 107 451.2657820842874 900.5170112353749 2 451.2654296755791 MULTI CID FTMS 0 0 0 4643 154042.765625 0.8344255467139693 -1 0.035186767578125 3 Unmodified _VPHVVHIT_ ENSG00000176239|ENST00000380219|OR51B6 5.760428011301431 0.7893668129297577 5 {I|L} 1 7 12.474 0.0 0.0 1.3852 0.0 0.0 769.4220538152562 0.0 769.4220538152562 0.0 3.8907562519182193 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3852 + + 35 + 1 2.859 77562.6 1.0 958 3686 4643 SUDHL4_400M_050219_1,4646 SUDHL4_400M_050219_1,4646,VPHVVHIT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4649 22.791 800.0 177470.0 25 0 23254.0 -1 0 64 644.7783143660586 2575.084151597834 4 645.0287353396416 MULTI CID FTMS 0 0 0 4648 131188.6875 0.2141468254474317 15 -0.2599945068359375 1 5 PP 2 -1 17.959 0.0 0.0 0.69741 0.0 0.0 2363.0609889167827 0.0 2363.0609889167827 0.0 1.7216751192405155 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.69741 - 17 1 2.859 109924.0 0.6499999761581421 959 3688 4648 SUDHL4_400M_050219_1,4649 SUDHL4_400M_050219_1,4649, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4650 22.805 800.0 192900.0 25 0 20716.0 + 2395 AQPETRVSY 9 121 525.7643440933829 1049.5141352535657 2 525.7647582888603 MULTI CID FTMS 0 0 0 4648 120330.90625 0.390106013582528 -4 0.1067237854003906 2 Unmodified _AQPETRVSY_ ENSG00000158615|ENST00000367188|PPP1R15B 39.94969957227396 0.0757326808254658 5 [QA]PTQ[KQ]SY 9 4 + 48.303 0.0 0.0 4.6024 4.6024 76.091 0.0 0.0 0.0 30.22090909450005 9.58658700999257 9.58658700999257 0.0736827906096095 0 0.5 1.0969100130080565 0.7134679910804405 0.3807196863200844 [QA]PTQ[KQ]SY;[QA]YYKKSY;[QA]P[NG]V[KS]SY;[QA]PT[AG][KQ]SY;[QA]P[DN]KKSY;[QA]P{[WT]|[RM]}VWY;[QA]PT[TA]{I|L}WY;[QA]PT[VS]VWY;[TP]{[RE]|[WV]}VSY[QA];[YK][YK]SY[QA] 4.6024;4.5954;3.7599;3.725;3.595;2.9231;2.8154;2.604;1.6998;0.8917 -;-;-;-;-;-;-;-;-;- 368 + 1 2.859 121440.5 0.5799999833106995 960 3688 4648 SUDHL4_400M_050219_1,4650 SUDHL4_400M_050219_1,4650,AQPETRVSY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4652 22.813 211.0 249390.0 25 0 13202.0 + 45392 YTAQPTQGY 9 89 514.7383342686863 1027.4621156041726 2 514.7377807497978 MULTI CID FTMS 0 0 0 4651 118272.28125 0.808588609978847 2 -0.0511398315429687 1 Unmodified _YTAQPTQGY_ ENSG00000182944|ENST00000397938|EWSR1;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;nc|ENSG00000182944|Q01844-2|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1 32.30548876998284 0.1201446275138228 5 [YT]{M(Oxidation (M))|F} 3 7 30.502 0.0 0.0 2.9687 0.0 0.0 0.0 613.2677654014883 613.2677654014883 1.3574713785659045 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3054621874040891 0.0 [YT]{M(Oxidation (M))|F} 2.9687 - 142 1 2.859 46258.1 1.0 961 3689 4651 SUDHL4_400M_050219_1,4652 SUDHL4_400M_050219_1,4652,YTAQPTQGY True True YTAQPTQGY 22.812744 514.737780749798 773522.5 4651.0 nc|ENSG00000182944|Q01844-6|EWSR1;;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;;nc|ENSG00000182944|Q01844-5|EWSR1;;nc|ENSG00000182944|Q01844-4|EWSR1;;nc|ENSG00000182944|Q01844-3|EWSR1;;nc|ENSG00000182944|Q01844-2|EWSR1;;ENSG00000182944|ENST00000397938|EWSR1 6.210669994354248 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4653 22.82 421.0 189420.0 25 0 29583.0 + 12197 GQRQVGVGY 9 115 482.25477351628666 962.4949940993732 2 482.2554199099541 MULTI CID FTMS 0 0 0 4651 146675.203125 0.2249575904533299 6 -0.1335048675537109 2 Unmodified _GQRQVGVGY_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 32.30548876998284 0.1201446275138228 5 {[QG]|[NA]}RQRVGY 8 2 {[QG]|[NA]}RQRV + + 30.217 5.9497 0.82133 3.1394 3.1394 54.417 0.0 0.0 0.0 0.0 6.315408415317855 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {[QG]|[NA]}RQRVGY 3.1394 - 193 + 1 2.859 64333.3 1.0 962 3689 4651 SUDHL4_400M_050219_1,4653 SUDHL4_400M_050219_1,4653,GQRQVGVGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4655 22.829 368.0 183050.0 25 0 12791.0 + 33360 SGHPTMTQY 9 108 511.2246905741056 1020.4348282150112 2 511.2243835330009 MULTI CID FTMS 0 0 0 4654 148907.4375 0.5557261142307203 -2 0.0452003479003906 1 Unmodified _SGHPTMTQY_ ENSG00000145088|ENST00000273668|EAF2;nc|ENSG00000145088|Q96CJ1-2|EAF2 36.04419817259434 0.0971720506436186 5 MTQY 4 5 17.897 0.0 0.0 1.7539 0.0 0.0 479.2126332013688 0.0 479.2126332013688 0.0 -2.336244007532464 -2.336244007532464 0.0 0 0.3935078169319297 0.0 0.5 0.0 + MTQY 1.7539 + + 220 1 2.859 57851.1 1.0 963 3690 4654 SUDHL4_400M_050219_1,4655 SUDHL4_400M_050219_1,4655,SGHPTMTQY True True SGHPTMTQY 22.829421 511.224383533001 1245071.625 4654.0 ENSG00000145088|ENST00000273668|EAF2;;nc|ENSG00000145088|Q96CJ1-2|EAF2 7.896937847137451 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4656 22.833 194.0 469520.0 25 0 53763.0 36646 TATRPITKM 9 88 509.78949115232 1017.56442937144 2 509.7893554568291 MULTI CID FTMS 0 0 0 4654 263424.28125 0.074992142777686 -9 0.2147026062011718 2 Unmodified _TATRPITKM_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 24.99096001346401 0.2132109383330889 5 {[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]TMK 9 5 + 43.847 0.0 0.0 4.309 4.309 88.059 0.0 0.0 0.0 0.002633910416776 20.65938719897659 0.002633910416776 25.71333751784365 0 1.8494850021680087 0.0 0.6989700043360187 0.0 {[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]TMK;{[CT]|[{M(Oxidation (M))|F}G]}[KP][{I|L}P]G{M(Oxidation (M))|F}[VG];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[VA]|[{I|L}G]}[{I|L}P]G{M(Oxidation (M))|F}[VG] 4.309;1.7821;1.6856 -;-;- 165 1 2.859 73220.2 1.0 964 3690 4654 SUDHL4_400M_050219_1,4656 SUDHL4_400M_050219_1,4656,TATRPITKM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4657 22.847 800.0 39857.0 25 0 10548.0 -1 0 30 1165.467314331838 3493.380113595714 3 1165.801684558392 MULTI CID FTMS 0 0 0 4654 90909.765625 0.2267495420171542 8 -0.1894664764404297 3 5 Y 1 -1 3.4949 0.0 0.0 0.10004 0.0 0.0 2204.773814092823 1122.5086153619752 3327.282429454798 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.10004 - 1 + 1 2.859 35634.8 0.3799999952316284 965 3690 4654 SUDHL4_400M_050219_1,4657 SUDHL4_400M_050219_1,4657, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4658 22.856 534.0 256200.0 25 0 65684.0 39571 VCPPVPRPS 9 105 476.2576629869603 950.5007730407208 2 476.2569152712822 MULTI CID FTMS 0 0 0 4654 102192.3203125 0.7728127948129928 10 -0.1973438262939453 4 Unmodified _VCPPVPRPS_ ENSG00000187033|ENST00000335556|SAMD7 13.90604991867851 0.4602628045680013 5 {[DS]|[MA]|[CV]|TT}PP 4 5 40.177 0.0 0.0 4.227 0.0 0.0 0.0 551.2944195521289 551.2944195521289 29.69273760456403 0.0 0.0 0.0 0 0.6989700043360187 1.6989700043360187 0.0 0.0 + {[DS]|[MA]|[CV]|TT}PP 4.227 + + 53 + 1 2.859 108292.3 1.0 966 3690 4654 SUDHL4_400M_050219_1,4658 SUDHL4_400M_050219_1,4658,VCPPVPRPS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4660 22.862 184.0 419730.0 25 0 59189.0 + 32140 RVPPPPQSV 9 77 488.7829437747218 975.5513346162436 2 488.7823669314384 MULTI CID FTMS 0 0 0 4659 258161.75 0.289511706032551 7 -0.1533050537109375 1 Unmodified _RVPPPPQSV_ ENSG00000160691|ENST00000448116|SHC1;nc|ENSG00000160691|P29353-2|SHC1;nc|ENSG00000160691|P29353-3|SHC1;nc|ENSG00000160691|P29353-5|SHC1;nc|ENSG00000160691|P29353-7|SHC1;nc|ENSG00000160691|P29353|SHC1 45.69961567697781 0.0497987121815769 5 [RV]PPPPQSV 9 0 + 54.446 0.0 0.0 5.581 5.581 88.868 0.0 0.0 0.0 16.980523937757752 41.34697482522071 16.980523937757752 9.208187539523747 0 1.2104093769761874 1.2218487496163564 0.0 0.0 + + [RV]PPPPQSV;[RV]PPPP[AG]SV;[RV][YK]PQSV;[RV]P[YK]QSV;[RV][YK]P[AG]SV;[RV]P[YK][AG]SV;[RV][MT]KKDV;[RV]{[CA]|SS}S[RV]SV 5.581;4.6371;3.6866;3.3735;2.7372;2.424;1.4514;1.1608 +;-;-;-;-;-;-;- + 115 1 2.859 64466.4 1.0 967 3691 4659 SUDHL4_400M_050219_1,4660 SUDHL4_400M_050219_1,4660,RVPPPPQSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4661 22.865 144.0 503280.0 25 0 51463.0 + 36524 TAGKVGPS 8 102 358.70037153881384 0 358.7002746462822 PEAK CID FTMS 0 0 0 4659 207778.90625 0.1540405935946747 -6 0.1383781433105468 2 Unmodified _TAGKVGPS_ REV__ENSG00000084636|ENST00000373672|COL16A1;REV__nc|ENSG00000084636|Q07092-2|COL16A1 7.910154910731844 0.5650536163073903 5 {I|L}E 2 -1 13.583 0.0 0.0 1.8988 0.0 0.0 200.0793710569381 270.15728908210923 470.2366601390473 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 {I|L}E 1.8988 - 25 + 1 2.859 64783.1 1.0 968 3691 4659 SUDHL4_400M_050219_1,4661 SUDHL4_400M_050219_1,4661,TAGKVGPS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4662 22.872 393.0 273830.0 25 0 104820.0 -1 0 101 502.283574456704 501.276297990104 1 502.2838317751884 MULTI CID FTMS 0 0 0 -1 0 3 5 N 1 -1 8.6292 0.0 0.0 1.7214 0.0 0.0 369.2224172301415 0.0 369.2224172301415 0.0 8.629210753681601 0.0 0.0 0 0.0 0.0 0.0 0.0 N 1.7214 - 5 + 1 2.859 85735.3 1.0 969 3691 4659 SUDHL4_400M_050219_1,4662 SUDHL4_400M_050219_1,4662, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4663 22.885 719.0 152970.0 25 0 20799.0 30748 RHGIALKAVC 10 131 534.3114321722237 0 534.3110839724541 PEAK CID FTMS 0 0 0 4659 102854.53125 0.3393498816163197 -84 1.4845905303955078 4 Unmodified _RHGIALKAVC_ ENSG00000164296|ENST00000296736|TIGD6 3.944395688203298 0.3961065659209837 5 D 1 10 6.9897 0.0 0.0 0.65532 0.0 0.0 352.2438837762848 596.3157442682249 948.5596280445096 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.65532 - 10 + 1 2.859 87622.7 1.0 970 3691 4659 SUDHL4_400M_050219_1,4663 SUDHL4_400M_050219_1,4663,RHGIALKAVC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4665 22.903 800.0 151850.0 25 0 15923.0 + 10665 FVQLCPYKGQG 11 109 620.3133614553385 1238.612169977477 2 620.3124877810478 MULTI CID FTMS 0 0 0 4664 114253.5703125 0.3506291467481937 -72 1.3861579895019531 1 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 5 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 74.154 20.373 5.1422 5.9868 5.9868 62.188 0.0 0.0 0.0 0.0 56.753264960604014 0.0 0.0 0 2.6549471895720984 0.0 0.0 1.8912939259328765 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 5.9868 - 3406 + 1 2.859 92255.5 0.5699999928474426 971 3692 4664 SUDHL4_400M_050219_1,4665 SUDHL4_400M_050219_1,4665,FVQLCPYKGQG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4666 22.908 318.0 133220.0 25 0 9717.5 + 19250 LEKDYEEVG 9 76 541.2561527560598 1080.4977525789195 2 541.2565795779228 MULTI CID FTMS 0 0 0 4664 144972.859375 1.0 0 0.0 2 Unmodified _LEKDYEEVG_ ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000530835.1_1_11:90016856-90017168:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C 18.1463463914782 0.3454829746528889 5 K{I|L}ER 4 7 36.96 0.0 0.0 3.4207 0.0 0.0 536.1764393537125 0.0 536.1764393537125 0.0 29.9704350275697 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 K{I|L}ER 3.4207 - 105 1 2.859 41774.9 1.0 972 3692 4664 SUDHL4_400M_050219_1,4666 SUDHL4_400M_050219_1,4666,LEKDYEEVG False True LEKDYEEVG 22.908411 541.256579577923 633453.625 4664.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000127824|ENST00000248437|TUBA4A;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000167553|ENST00000301072|TUBA1C;;ENST00000530835.1_1_11:90016856-90017168:+|nuORF;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;ENSG00000167552|ENST00000301071|TUBA1A;;ENSG00000075886|ENST00000321253|TUBA3D;;ENSG00000198033|ENST00000400113|TUBA3C;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000198033|P0DPH7-2|TUBA3C;;nc|ENSG00000123416|P68363-2|TUBA1B;;nc|ENSG00000127824|P68366-2|TUBA4A 2.947530031204224 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4667 22.914 292.0 228370.0 25 0 69393.0 + -1 STMSTNGIPRG 11 68 560.2938422520995 559.2865657854994 1 560.2923461794853 MULTI CID FTMS 0 0 0 4664 181612.6875 0.3728694331493518 -13 0.3152713775634765 3 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 5 {[ET]|[MV]}{I|L}TP 5 -1 + 35.757 0.0 0.0 6.3934 6.3934 93.726 0.0 0.0 0.0 18.010299956639813 11.477926622244592 11.477926622244592 21.020599913279625 0 0.8494850021680094 0.0 0.3494850021680094 0.0 {[ET]|[MV]}{I|L}TP;[C(Carbamidomethyl (C))K]RP 6.3934;2.6349 -;- 45 + 1 2.859 59159.5 1.0 973 3692 4664 SUDHL4_400M_050219_1,4667 SUDHL4_400M_050219_1,4667, False False STMSTNGIPRG 22.913779 560.292346179485 431109.59375 4664.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 0.9831162293752036 2.0 False 11.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4670 22.925 243.0 304760.0 25 0 48216.0 31319 RMGDAIGIS 9 88 460.23855000096745 918.4625470687348 2 460.2385742068291 MULTI CID FTMS 0 0 0 4669 226623.109375 0.4865495306119833 -10 0.2495346069335937 1 Unmodified _RMGDAIGIS_ ENSG00000180423|ENST00000326737|HARBI1 11.640296217721598 0.521594087909532 5 Y 1 9 12.218 0.0 0.0 1.3303 0.0 0.0 737.3881584962725 0.0 737.3881584962725 0.0 2.7545373444029053 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3303 - 5 + 1 2.859 65159.4 1.0 974 3694 4669 SUDHL4_400M_050219_1,4670 SUDHL4_400M_050219_1,4670,RMGDAIGIS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4671 22.939 800.0 123470.0 25 0 37669.0 20817 LLWLSCYGSAL 11 76 613.318586472342 1224.6226200114838 2 613.3194457888603 MULTI CID FTMS 0 0 0 4669 99037.7109375 0.8841989119678239 -1 0.0040664672851562 2 Unmodified _LLWLSCYGSAL_ ENSG00000179397|ENST00000366534|CATSPERE;ENST00000478554.5_1_1:244624707-244662379:+|nuORF;nc|ENSG00000179397|Q5SY80-2|CATSPERE 8.745405648335112 0.8338865417133445 5 {I|L} 1 10 13.979 0.0 0.0 1.1415 0.0 0.0 1093.5279677671465 0.0 1093.5279677671465 0.0 1.7609125905568137 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1415 + + 37 + 1 2.859 78606.0 0.5 975 3694 4669 SUDHL4_400M_050219_1,4671 SUDHL4_400M_050219_1,4671,LLWLSCYGSAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4673 22.955 800.0 98423.0 25 0 5617.0 -1 PYQCKHCGKAF 11 98 669.8077104296278 1337.6008679260556 2 669.8073608279228 MULTI CID FTMS 0 0 0 4672 94129.34375 0.8321402948104966 -3 0.0538673400878906 1 Carbamidomethyl (C) _PYQC(Carbamidomethyl (C))KHCGKAF_ ENSG00000186300|ENST00000334241|ZNF555;nc|ENSG00000186300|Q8NEP9-2|ZNF555;nc|ENSG00000186300|Q8NEP9-4|ZNF555 13.90604991867851 0.7458848613461305 5 {[QG]|[NA]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F} 12 -1 + 89.012 0.0 0.0 6.6546 6.6546 90.562 0.0 0.0 0.0 15.645899619259822 54.98651242028323 15.645899619259822 9.098233696509126 0 0.8494850021680094 1.5228787452803376 0.3252574989159953 1.5994850021680094 {[QG]|[NA]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F};QQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F};[QA]G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F};QQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F};QQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F};QQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F};[QA]G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F} 6.6546;5.9744;5.9744;5.9744;5.3785;5.1252;4.696;4.696;4.696;4.445 -;-;-;-;-;-;-;-;-;- 1037 1 2.859 65270.1 0.5199999809265137 976 3695 4672 SUDHL4_400M_050219_1,4673 SUDHL4_400M_050219_1,4673,PYQCKHCGKAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4674 22.969 800.0 107470.0 25 0 3368.2 -1 0 94 725.659288315322 2173.956035546166 3 725.9926025271416 MULTI CID FTMS 0 0 0 4672 84981.609375 0.9501276791996236 -3 0.0538673400878906 2 5 TVDN 4 -1 44.285 0.0 0.0 2.037 0.0 0.0 1726.7579933398654 0.0 1726.7579933398654 0.0 14.346149542971744 0.0 0.0 0 0.805462187404089 0.0 0.7302046884880937 0.0 TVDN 2.037 - 218 1 2.859 69744.9 0.4699999988079071 977 3695 4672 SUDHL4_400M_050219_1,4674 SUDHL4_400M_050219_1,4674, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4675 22.972 127.0 537920.0 25 0 236660.0 42091 VRECKEVL 8 60 488.2685643156195 0 488.2680236697197 PEAK CID FTMS 0 0 0 4672 349735.59375 0.3925504038714528 -31 0.7583236694335938 3 Unmodified _VRECKEVL_ ENSG00000085511|ENST00000392142|MAP3K4;nc|ENSG00000085511|Q9Y6R4-2|MAP3K4 8.593279151180031 0.5573742999696857 5 PPP 3 8 7.703 0.0 0.0 0.79044 0.0 0.0 428.1950857543961 252.14695154361564 680.3420372980117 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPP 0.79044 - 21 + 1 2.859 57487.8 1.0 978 3695 4672 SUDHL4_400M_050219_1,4675 SUDHL4_400M_050219_1,4675,VRECKEVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4677 22.988 800.0 114370.0 25 0 5271.6 -1 0 58 666.9883886343786 3329.9055608388926 5 667.3895751833916 MULTI CID FTMS 0 0 0 4676 58315.6171875 0.4307243664899121 16 -0.1256999969482422 1 5 W 1 -1 3.0989 0.0 0.0 0.093064 0.0 0.0 2771.7471878914303 369.0492159415919 3140.796403833022 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.093064 - 1 + 1 2.859 71541.5 0.5199999809265137 979 3696 4676 SUDHL4_400M_050219_1,4677 SUDHL4_400M_050219_1,4677, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4678 22.993 248.0 252580.0 25 0 20284.0 40029 VGFPGAGK 8 115 366.7058769475432 731.3972009618864 2 366.7053710818291 MULTI CID FTMS 0 0 0 4676 91079.3046875 0.8916549959375843 1 -0.0210018157958984 2 Unmodified _VGFPGAGK_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50364507-50367546:-|nuORF;ENST00000601816.3_1_19:50365027-50365457:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 0.7936320650641473 0.8195151834710337 5 [EP]V 3 7 27.157 0.0 0.0 3.713 0.0 0.0 0.0 403.21086608323327 403.21086608323327 15.167052091098247 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.2302046884880938 0.0 [EP]V 3.713 - 31 1 2.859 53717.9 1.0 980 3696 4676 SUDHL4_400M_050219_1,4678 SUDHL4_400M_050219_1,4678,VGFPGAGK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4680 23.001 337.0 456260.0 25 0 127270.0 -1 0 60 1154.804379394752 3461.391308784456 3 1155.137622058392 MULTI CID FTMS 0 0 0 4679 986062.0625 0.4886753457247191 5 -0.0361843109130859 1 5 YC(Carbamidomethyl (C))YH 4 -1 9.897 0.0 0.0 0.28593 0.0 0.0 1822.6615247041807 1012.4832857721312 2835.144810476312 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YC(Carbamidomethyl (C))YH 0.28593 - 161 + 1 2.859 134349.1 1.0 981 3697 4679 SUDHL4_400M_050219_1,4680 SUDHL4_400M_050219_1,4680, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4681 23.01 475.0 133810.0 25 0 17380.0 + 2386 AQNPANMSKY 10 100 562.2656390984739 1122.5167252637475 2 562.2657348513603 MULTI CID FTMS 0 0 0 4679 90086.390625 0.6607408672273376 -2 0.0538215637207031 2 Unmodified _AQNPANMSKY_ ENSG00000100380|ENST00000216218|ST13;nc|ENSG00000212789|Q8NFI4|ST13P5 22.65808497894818 0.4596126414678359 5 [QA]N 3 7 24.265 0.0 0.0 2.1616 0.0 0.0 0.0 806.355384281579 806.355384281579 11.200845189037103 0.0 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 + [QA]N 2.1616 + + 80 1 2.859 54353.1 1.0 982 3697 4679 SUDHL4_400M_050219_1,4681 SUDHL4_400M_050219_1,4681,AQNPANMSKY False True AQNPANMSKY 23.0097 562.2662 668988.3125 4679.0 ENSG00000100380|ENST00000216218|ST13;;nc|ENSG00000212789|Q8NFI4|ST13P5 5.9680741628011065 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4685 23.025 258.0 222210.0 25 0 49246.0 + + 10835 KIMDQVQQA 9 76 530.2765441640921 1058.538535394984 2 530.2774536013603 MULTI CID FTMS 0 0 0 4684 56184.43359375 0.5491638844255434 -6 0.0997333526611328 1 Unmodified _GAAGSWARGAR_ ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-3|APC;nc|ENSG00000134982|P25054-2|APC 9.38312468134398 0.8308777417566128 5 [QA]E 3 -1 13.952 0.0 0.0 1.3181 0.0 0.0 0.0 727.3776216589091 727.3776216589091 8.467874862246562 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 [QA]E 1.3181 - 44 1 2.859 50301.3 1.0 983 3700 4684 SUDHL4_400M_050219_1,4685 SUDHL4_400M_050219_1,4685,GAAGSWARGAR False False KIMDQVQQA 23.02492 530.27745360136 485358.375 4684.0 ENSG00000134982|ENST00000257430|APC;;nc|ENSG00000134982|P25054-3|APC;;nc|ENSG00000134982|P25054-2|APC 3.5445515314737954 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4688 23.035 194.0 394630.0 25 0 41868.0 + 35811 SVKPASSSF 9 107 455.2376746886468 908.4607964440936 2 455.2375366091728 MULTI CID FTMS 0 0 0 4687 301927.4375 0.3314454970108877 -14 0.253732681274414 1 Unmodified _SVKPASSSF_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-3|LAS1L 30.63653989081413 0.1413794767160703 5 [VS]K 3 6 28.869 0.0 0.0 3.1778 0.0 0.0 0.0 591.2382296197874 591.2382296197874 3.1947654920421087 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + [VS]K 3.1778 + + 217 + 1 2.859 67674.0 1.0 984 3702 4687 SUDHL4_400M_050219_1,4688 SUDHL4_400M_050219_1,4688,SVKPASSSF False True SVKPASSSF 23.035037 455.237536609173 4283239.5 4687.0 ENSG00000001497|ENST00000374811|LAS1L;;nc|ENSG00000001497|Q9Y4W2-3|LAS1L;;nc|ENSG00000001497|Q9Y4W2-2|LAS1L 5.8182477951049805 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4691 23.055 800.0 144170.0 25 0 14296.0 + + 28945 AQPETRVSY 9 115 525.7643440933829 1049.5141352535657 2 525.7645751833916 MULTI CID FTMS 0 0 0 4690 138519.9375 0.4490738273636656 12 -0.1272354125976562 1 Unmodified _QAYEREIAA_ ENSG00000158615|ENST00000367188|PPP1R15B 29.081581746732265 0.1611639662936252 5 [EP]TRVSYQA 9 -1 + 35.075 0.0 0.0 3.342 3.342 83.188 0.0 0.0 0.0 0.5889687919203226 1.9741883018902016 0.5889687919203226 9.208187539523752 0 0.0 1.3979400086720375 0.2396518287104437 0.2614393726401688 [EP]TRVSYQA;[EP]TRVSY[AG]A;[EP]T[TP]V[HA]QA;[TP]ERVSYQA;[EP][{I|L}V]SG[HN][TP];[EP]TVVG[HN][TP];[YK][YK]SYQA;[TP]ERVSY[AG]A;[TP]E[TP]V[HA]QA;[YK][YK]SY[AG]A 3.342;2.4646;2.3304;1.9591;1.8472;1.3926;1.1668;1.0817;0.94748;0.28427 -;-;-;-;-;-;-;-;-;- 452 1 2.859 95261.5 0.7099999785423279 985 3704 4690 SUDHL4_400M_050219_1,4691 SUDHL4_400M_050219_1,4691,QAYEREIAA False False AQPETRVSY 23.055264 525.764575183392 3869299.25 4690.0 ENSG00000158615|ENST00000367188|PPP1R15B 6.536708354949951 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4694 23.073 630.0 118820.0 25 0 13784.0 + -1 KLHCMVFK 8 109 539.7816439199134 1077.5487349066268 2 539.7814208865166 MULTI CID FTMS 0 0 0 4693 73132.4765625 0.6646448429365522 -13 0.145517349243164 1 Carbamidomethyl (C),Oxidation (M) _KLHC(Carbamidomethyl (C))M(Oxidation (M))VFK_ REV__nc|ENSG00000274150|A8MWK0|FADS2B 16.942295170755138 0.6606234159769251 5 [W{I|L}]AS[{I|L}P]TQY 9 -1 + 38.177 0.0 0.0 3.543 3.543 83.505 0.0 0.0 0.0 15.192735296361278 9.978785721651311 9.978785721651311 9.208187539523752 0 1.5 1.3010299956639813 0.0 0.0 [W{I|L}]AS[{I|L}P]TQY;[W{I|L}]AS[{I|L}P]T[AG]Y 3.543;2.6884 -;- 234 + 1 2.864 60094.9 1.0 986 3706 4693 SUDHL4_400M_050219_1,4694 SUDHL4_400M_050219_1,4694,KLHCMVFK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4697 23.081 17.0 3226100.0 25 0 509310.0 + 15700 IQRLETMK 8 71 509.78949115232 1017.56442937144 2 509.7895385622978 MULTI CID FTMS 0 0 0 4696 2817504.25 0.802092654443704 9 -0.093475341796875 1 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 5 MTMK 4 -1 47.805 0.0 0.0 4.698 0.0 0.0 508.3200578888212 0.0 508.3200578888212 0.0 26.37849394003545 0.0 0.0 0 1.5 0.0 0.0 0.3252574989159953 MTMK 4.698 - 80 + 1 2.864 50900.2 1.0 987 3708 4696 SUDHL4_400M_050219_1,4697 SUDHL4_400M_050219_1,4697,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4700 23.093 289.0 301290.0 25 0 42560.0 + 17640 KPTAAFHLL 9 89 499.2934061834136 996.5722594336272 2 499.2942993044853 MULTI CID FTMS 0 0 0 4699 184950.09375 0.6013168124372866 -1 0.0040493011474609 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 5 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3539653363333 667.3539653363333 20.02697515943353 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 63 + 1 2.864 68924.4 1.0 988 3710 4699 SUDHL4_400M_050219_1,4700 SUDHL4_400M_050219_1,4700,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4703 23.102 126.0 384050.0 25 0 54449.0 + -1 IQRLETMK 8 69 517.7869377546529 1033.5593225761056 2 517.7874633669853 MULTI CID FTMS 0 0 0 4702 227273.28125 0.7831855695826033 1 -0.0281620025634765 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 5 KTT[{I|L}P][WP]K 8 -1 37.011 0.0 0.0 3.5809 0.0 0.0 63.99833119696661 0.0 63.99833119696661 0.0 18.75312151379113 0.0 0.0 0 0.8494850021680094 0.0 0.8494850021680094 0.2396518287104437 KTT[{I|L}P][WP]K 3.5809 - 83 + 1 2.864 43908.1 1.0 989 3712 4702 SUDHL4_400M_050219_1,4703 SUDHL4_400M_050219_1,4703,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4704 23.116 800.0 27897.0 25 0 7207.7 -1 0 26 1165.4684196032772 3493.383429410032 3 1165.802172839642 MULTI CID FTMS 0 0 0 4702 32057.322265625 0.4451647505795996 1 -0.0281620025634765 2 5 MC 2 -1 5.5732 0.0 0.0 0.15954 0.0 0.0 2196.9181716969447 1059.4414766901002 3256.359648387045 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MC 0.15954 - 4 + 1 2.864 30182.7 0.3400000035762787 990 3712 4702 SUDHL4_400M_050219_1,4704 SUDHL4_400M_050219_1,4704, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4705 23.125 520.0 210750.0 25 0 10786.0 + 27047 PEQNDRTPL 9 141 535.2673260703511 1068.5200992075022 2 535.2674438357353 MULTI CID FTMS 0 0 0 4702 119556.15625 0.1321285238761589 -14 0.0875797271728515 3 Unmodified _PEQNDRTPL_ ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;ENST00000544562.5_1_14:23067206-23078652:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4 32.30548876998284 0.1201446275138228 5 [EP]QDT[RN]P{I|L} 9 3 + 33.024 0.0 0.0 3.0906 3.0906 82.797 0.0 0.0 0.0 9.130580748770363 1.3017851517951478 1.3017851517951478 9.208187539523756 0 0.3807196863200844 0.4559319556497244 0.6747425010840047 0.3807196863200844 [EP]QDT[RN]P{I|L};[EP][AG]DT[RN]P{I|L};[EP]Q[TP][WQ]A{I|L};[EP]QDT[RN]{I|L}P;[EP]QDT[R{I|L}]NP;[EP][AG]DT[RN]{I|L}P;[EP]QDT[R{I|L}]GGP;[EP][AG]DT[R{I|L}]NP;{[QD]|[EN]|[WG]|[KD]|[RS]}[KP]D[WP]A{I|L} 3.0906;2.2288;1.9261;1.5828;1.3219;0.721;0.52458;0.46012;0.21597 -;-;-;-;-;-;-;-;- 745 + 1 2.864 87433.6 1.0 991 3712 4702 SUDHL4_400M_050219_1,4705 SUDHL4_400M_050219_1,4705,PEQNDRTPL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4707 23.13 85.0 698740.0 25 0 88905.0 + 36525 TAGKVGPS 8 77 358.70037153881384 0 358.7003661990166 PEAK CID FTMS 0 0 0 4706 481126.5 0.3566917017310475 16 -0.1937770843505859 1 Unmodified _TAGKVGPS_ REV__ENSG00000084636|ENST00000373672|COL16A1;REV__nc|ENSG00000084636|Q07092-2|COL16A1 12.531546534597751 0.5131024102181418 5 {I|L}ER 3 -1 14.97 0.0 0.0 2.0926 0.0 0.0 200.08015113020025 114.0563753717406 314.13652650194086 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.2742275032520141 {I|L}ER 2.0926 - 22 + 1 2.864 56974.5 1.0 992 3713 4706 SUDHL4_400M_050219_1,4707 SUDHL4_400M_050219_1,4707,TAGKVGPS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4708 23.138 404.0 242280.0 25 0 30878.0 + 17059 KLAPIMPAL 9 96 477.2981914371845 952.5818299411692 2 477.2972900271416 MULTI CID FTMS 0 0 0 4706 92692.234375 0.4572692813908539 -5 0.048746109008789 2 Unmodified _KLAPIMPAL_ REV__ENST00000468220.1_1_3:190040432-190088720:+|nuORF 32.116972079565 0.1225432171549407 5 K{I|L}A 3 -1 49.037 0.0 0.0 5.1478 0.0 0.0 0.0 637.3422587391553 637.3422587391553 33.4633418206192 0.0 0.0 0.0 0 1.325257498915995 0.958607314841775 0.0 0.0 K{I|L}A 5.1478 + + 37 + 1 2.864 81542.1 1.0 993 3713 4706 SUDHL4_400M_050219_1,4708 SUDHL4_400M_050219_1,4708,KLAPIMPAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4711 23.152 440.0 204720.0 25 0 19696.0 + + 10666 MPPAPPPPPPQN 12 104 620.3133614553385 1238.612169977477 2 620.3146850466728 MULTI CID FTMS 0 0 0 4710 155380.96875 0.4768437112705239 -49 0.937082290649414 1 Unmodified _FVQLCPYKGQG_ ENST00000413725.5_1_11:64533292-64535069:-|nuORF;ENSG00000168066|ENST00000377390|SF1;nc|ENSG00000168066|Q15637-7|SF1 21.53697664764585 0.586507868110548 5 {[HG]|PP}AMPPPPPPQN 12 -1 {[HG]|PP}AM + + 76.32 10.177 2.5688 6.1617 6.1617 62.566 0.0 0.0 0.0 0.0 64.91795817317842 0.0 0.0 0 2.6237125054200234 0.0 0.0 1.9551120522087029 {[HG]|PP}AMPPPPPPQN 6.1617 - 1633 + 1 2.864 72654.5 1.0 994 3715 4710 SUDHL4_400M_050219_1,4711 SUDHL4_400M_050219_1,4711,FVQLCPYKGQG False False MPPAPPPPPPQN 23.152265 620.314685046673 35590200.0 4710.0 ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;ENSG00000168066|ENST00000377390|SF1;;nc|ENSG00000168066|Q15637-7|SF1 5.813011407852173 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4712 23.166 800.0 39892.0 25 0 10999.0 -1 0 29 1188.843020428894 3563.5072318868824 3 1189.180224597454 MULTI CID FTMS 0 0 0 4710 80556.5234375 0.5244052679990084 -7 0.0651702880859375 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.864 37434.2 0.3499999940395355 995 3715 4710 SUDHL4_400M_050219_1,4712 SUDHL4_400M_050219_1,4712, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4715 23.176 161.0 369740.0 25 0 66480.0 + 35579 STSSPLNLT 9 71 460.23855000096745 918.4625470687348 2 460.2385436892509 MULTI CID FTMS 0 0 0 4714 275557.125 0.5916086413044681 13 -0.1599273681640625 1 Unmodified _STSSPLNLT_ REV__ENST00000604751.1_1_9:115618996-115637523:+|nuORF 10.823927491677226 0.5436922275383211 5 P 1 -1 9.9148 0.0 0.0 1.0795 0.0 0.0 803.3987709840654 0.0 803.3987709840654 0.0 5.310739533744222 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.0795 + + 14 + 1 2.864 49649.3 1.0 996 3717 4714 SUDHL4_400M_050219_1,4715 SUDHL4_400M_050219_1,4715,STSSPLNLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4716 23.19 800.0 47580.0 25 0 14270.0 -1 0 33 1079.466769953527 3235.378480460782 3 1079.799975574017 MULTI CID FTMS 0 0 0 4714 35478.078125 0.197447166334631 -5 0.0728912353515625 2 5 G 1 -1 6.9897 0.0 0.0 0.21604 0.0 0.0 1856.6710352476944 1318.6675477659655 3175.3385830136604 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21604 - 1 + 1 2.864 44919.3 0.449999988079071 997 3717 4714 SUDHL4_400M_050219_1,4716 SUDHL4_400M_050219_1,4716, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4719 23.199 160.0 311250.0 25 0 64586.0 + + 1182 ALPGHAESY 9 69 472.7275683732796 943.4405838133592 2 472.7272521853447 MULTI CID FTMS 0 0 0 4718 119481.21875 0.8913319149199056 14 -0.1599559783935547 1 Unmodified _AIAHPDASY_ nc|ENSG00000261236|Q14137-2|BOP1;ENSG00000261236|ENST00000569669|BOP1 16.942295170755138 0.3780752226737986 5 [{I|L}A][HM]EA 6 -1 25.947 0.0 0.0 2.7503 0.0 0.0 0.0 288.1105135553344 288.1105135553344 5.769921747127498 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}A][HM]EA 2.7503 - 80 + 1 2.864 44130.5 1.0 998 3719 4718 SUDHL4_400M_050219_1,4719 SUDHL4_400M_050219_1,4719,AIAHPDASY False False ALPGHAESY 23.199338 472.727252185345 1124131.375 4718.0 nc|ENSG00000261236|Q14137-2|BOP1;;ENSG00000261236|ENST00000569669|BOP1 3.4573225180308023 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4720 23.208 504.0 141210.0 25 0 13859.0 -1 0 99 680.3249267037819 679.3176502371819 1 680.3244506716728 MULTI CID FTMS 0 0 0 4718 147906.578125 0.908358046195844 -2 0.023468017578125 2 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENA 6 -1 + 65.864 0.0 0.0 9.6956 9.6956 93.259 0.0 0.0 0.0 21.706962271689747 50.47051108086609 21.706962271689747 7.710667722865381 0 1.1989700043360187 1.5228787452803376 0.0 0.5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}ENA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EGGA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}NA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}GGA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EG{I|L}GA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AD{I|L}GA;[{M(Oxidation (M))|F}V]TENA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[TP]SA;{[CP]|[EA]}Y{I|L}NA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AQ{NN|[MP]|[D{I|L}]|[EV]} 9.6956;8.5605;7.8517;6.7166;5.0624;4.9198;3.6878;3.3724;3.2534;3.1444 -;-;-;-;-;-;-;-;-;- 446 1 2.864 58386.4 1.0 999 3719 4718 SUDHL4_400M_050219_1,4720 SUDHL4_400M_050219_1,4720, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4721 23.222 800.0 118960.0 25 0 7358.6 -1 0 76 870.6112301982574 4348.019768658287 5 871.0121948122978 MULTI CID FTMS 0 0 0 4718 59181.83203125 0.4126928104489706 -8 0.1002483367919921 3 5 ASYDA 5 -1 30.304 0.0 0.0 0.69696 0.0 0.0 3543.6909061098286 294.10932336978755 3837.800229479616 0.0 0.0 0.0 0.0 0 1.5 0.0 0.2396518287104437 0.0 ASYDA 0.69696 - 56 + 1 2.864 69923.2 0.4000000059604645 1000 3719 4718 SUDHL4_400M_050219_1,4721 SUDHL4_400M_050219_1,4721, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4726 23.247 593.0 138100.0 25 0 22838.0 19036 LDLPPYKSY 9 113 548.2902790045293 0 548.2906371951103 PEAK CID FTMS 0 0 0 4725 73009.2265625 0.6957087105808062 3 -0.0472393035888671 1 Unmodified _LDLPPYKSY_ ENSG00000078747|ENST00000374864|ITCH;ENSG00000123124|ENST00000517970|WWP1;ENSG00000198373|ENST00000359154|WWP2;ENST00000466609.1_1_3:98378565-98379411:+|nuORF;nc|ENSG00000123124|Q9H0M0-3|WWP1;nc|ENSG00000123124|Q9H0M0-6|WWP1;nc|ENSG00000198373|O00308-2|WWP2;nc|ENSG00000198373|O00308-3|WWP2;nc|ENSG00000289720|Q96J02-3|ITCH;nc|ENSG00000289720|Q96J02|ITCH 7.910154910731844 0.3362437653303669 5 E{I|L}K 3 7 10.177 0.0 0.0 0.9298 0.0 0.0 267.1200603217563 454.2170199029906 721.337080224747 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}K 0.9298 - 38 + 1 2.864 67504.7 1.0 1001 3723 4725 SUDHL4_400M_050219_1,4726 SUDHL4_400M_050219_1,4726,LDLPPYKSY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4728 23.264 800.0 93890.0 25 0 22599.0 -1 0 46 1154.804379394752 3461.391308784456 3 1155.137133777142 MULTI CID FTMS 0 0 0 4727 180437.734375 0.0894218280783803 32 -0.5575981140136719 1 5 G 1 -1 6.9897 0.0 0.0 0.20193 0.0 0.0 2147.7578061026534 1253.5820076862376 3401.3398137888908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20193 - 8 + 1 2.864 71982.0 0.5 1002 3724 4727 SUDHL4_400M_050219_1,4728 SUDHL4_400M_050219_1,4728, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4729 23.277 800.0 50231.0 25 0 3364.2 -1 0 54 1088.012150442191 4348.019495902363 4 1088.262255847454 MULTI CID FTMS 0 0 0 4727 15061.2470703125 0.3311117900116319 -1 0.0129261016845703 2 5 A 1 -1 3.0989 0.0 0.0 0.071273 0.0 0.0 3979.849770415838 294.10984216861567 4273.959612584454 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.071273 - 6 + 1 2.864 36710.5 0.4000000059604645 1003 3724 4727 SUDHL4_400M_050219_1,4729 SUDHL4_400M_050219_1,4729, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4733 23.299 599.0 129430.0 25 0 25787.0 -1 0 71 560.2938422520995 559.2865657854994 1 560.2921630740166 MULTI CID FTMS 0 0 0 4732 68568.890625 0.1407789495930655 22 -0.3540573120117187 1 5 {[ET]|[MV]}{I|L}[TP] 5 -1 + 26.835 0.0 0.0 4.798 4.798 89.132 0.0 0.0 0.0 14.215613601963517 6.010927414393628 6.010927414393628 20.31234684152075 0 0.7614393726401688 0.0 0.2742275032520141 0.0 {[ET]|[MV]}{I|L}[TP];[QA][WR] 4.798;1.1662 -;- 28 + 1 2.864 62298.1 1.0 1004 3727 4732 SUDHL4_400M_050219_1,4733 SUDHL4_400M_050219_1,4733, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4734 23.301 141.0 414170.0 25 0 71005.0 33906 SLFRLDEQ 8 70 504.2630406179261 0 504.2627136111259 PEAK CID FTMS 0 0 0 4732 194555.734375 0.8881209056181093 -3 0.0383529663085937 2 Unmodified _SLFRLDEQ_ ENST00000504256.5_1_4:25419211-25420001:+|nuORF 8.593279151180031 0.5573742999696857 5 QK 2 8 5.5732 0.0 0.0 0.55371 0.0 0.0 375.1943418786272 372.1236055963501 747.3179474749772 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QK 0.55371 - 10 + 1 2.864 52205.3 1.0 1005 3727 4732 SUDHL4_400M_050219_1,4734 SUDHL4_400M_050219_1,4734,SLFRLDEQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4735 23.315 800.0 135220.0 25 0 59154.0 -1 0 88 572.3246162068292 571.3173397402292 1 572.3262817263603 MULTI CID FTMS 0 0 0 4732 78778.4609375 0.7968844067339591 3 -0.0446052551269531 3 5 {M(Oxidation (M))|F} 1 -1 10.713 0.0 0.0 1.8752 0.0 0.0 406.2377936970635 0.0 406.2377936970635 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.8752 - 35 + 1 2.864 88306.9 0.5400000214576721 1006 3727 4732 SUDHL4_400M_050219_1,4735 SUDHL4_400M_050219_1,4735, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4738 23.33 470.0 197640.0 25 0 26594.0 + 35096 SQVPQQSHF 9 98 529.2565197385682 1056.4984865439362 2 529.2562744021416 MULTI CID FTMS 0 0 0 4737 89785.234375 0.5656095703270724 -8 0.093109130859375 1 Unmodified _SQVPQQSHF_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 41.95555342248728 0.0647214845423414 5 {[QS]|[NT]}VPQQS{M(Oxidation (M))|F}H 9 2 + 57.558 0.0 0.0 5.448 5.448 88.516 0.0 0.0 0.0 40.33014589535185 8.384767769392738 8.384767769392738 9.208187539523747 0 1.274227503252014 1.3010299956639813 0.8494850021680094 0.0 {[QS]|[NT]}VPQQS{M(Oxidation (M))|F}H;{[QS]|[NT]}VPQ[AG]S{M(Oxidation (M))|F}H;{[QS]|[NT]}VP[AG]QS{M(Oxidation (M))|F}H;{[QS]|[NT]}VPQQ[HA]Y;{[QS]|[NT]}VP[AG][AG]S{M(Oxidation (M))|F}H;{[QS]|[NT]}[WK]WWH;{[QS]|[NT]}[QP]H{M(Oxidation (M))|F}V{[QS]|[NT]};{[QS]|[NT]}VP[AG]Q[HA]Y;{[QS]|[NT]}VPQ[AG][HA]Y;[WK]{M(Oxidation (M))|F}[QA]{[QS]|[NT]}Y 5.448;4.5765;4.5765;3.8145;3.709;3.2944;3.2103;2.943;2.943;1.4345 -;-;-;-;-;-;-;-;-;- 266 + 1 2.871 74031.2 1.0 1007 3729 4737 SUDHL4_400M_050219_1,4738 SUDHL4_400M_050219_1,4738,SQVPQQSHF True True SQVPQQSHF 23.330104 529.256274402142 2549430.75 4737.0 ENSG00000116830|ENST00000369466|TTF2;;nc|ENSG00000116830|Q9UNY4-2|TTF2 7.462100187937419 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4741 23.34 193.0 470420.0 25 0 155390.0 12238 GQWYLPNATIQ 11 42 430.8882392269401 0 430.8881713747978 PEAK CID FTMS 0 0 0 4740 252022.96875 0.6669783745521318 107 -2.53042221069336 1 Unmodified _GQWYLPNATIQ_ nc|ENSG00000197558|A2VEC9|SSPOP 2.498486711656943 0.4761840153648598 5 A 1 10 0.088644 0.0 0.0 0.01031 0.0 0.0 428.52957796384266 357.17109094791255 785.7006689117552 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.01031 + + 2 + 1 2.871 76122.3 1.0 1008 3731 4740 SUDHL4_400M_050219_1,4741 SUDHL4_400M_050219_1,4741,GQWYLPNATIQ False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 4742 23.35 533.0 150420.0 25 0 35192.0 + -1 AQYEDIAQKSKAEAE 15 80 561.2690624967792 560.2617860301791 1 561.2720825076103 MULTI CID FTMS 0 0 0 4740 99243.046875 0.7976446986096438 -4 0.0486297607421875 2 ENSG00000167768|ENST00000252244|KRT1 5 {I|L}V{M(Oxidation (M))|F} 3 -1 13.136 0.0 0.0 2.3446 0.0 0.0 183.06669493880025 0.0 183.06669493880025 0.0 1.3533512254760025 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}V{M(Oxidation (M))|F} 2.3446 - 29 + 1 2.871 65583.0 1.0 1009 3731 4740 SUDHL4_400M_050219_1,4742 SUDHL4_400M_050219_1,4742, False False AQYEDIAQKSKAEAE 23.349754 561.27208250761 475968.5 4740.0 ENSG00000167768|ENST00000252244|KRT1 6.455726782480876 3.0 False 15.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4745 23.362 314.0 403700.0 25 0 235690.0 -1 0 76 470.25903194521305 469.25175547861306 1 470.2567626833916 MULTI CID FTMS 0 0 0 4744 237222.734375 0.1645476089732974 53 -1.2977848052978516 1 5 {I|L} 1 -1 10.713 0.0 0.0 2.2831 0.0 0.0 338.156965905174 0.0 338.156965905174 0.0 9.119543704721591 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.2831 - 11 + 1 2.871 105020.8 1.0 1010 3733 4744 SUDHL4_400M_050219_1,4745 SUDHL4_400M_050219_1,4745, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4746 23.367 258.0 330330.0 25 0 26727.0 + 12119 GQINPNSGY 9 116 475.2230448145692 948.4315366959383 2 475.2224304080009 MULTI CID FTMS 0 0 0 4744 148479.0625 1.0 0 0.0 2 Unmodified _GQINPNSGY_ ENSG00000143379|ENST00000692827|SETDB1;nc|ENSG00000143379|Q15047-3|SETDB1;nc|ENSG00000143379|Q15047|SETDB1 26.88365393820708 0.1891292719743517 5 Y 1 8 14.604 0.0 0.0 1.5398 0.0 0.0 767.357422781679 0.0 767.357422781679 0.0 -0.6054159215610362 -0.6054159215610362 0.0 0 0.0 0.0 0.0 0.0 + Y 1.5398 + + 204 + 1 2.871 70025.6 1.0 1011 3733 4744 SUDHL4_400M_050219_1,4746 SUDHL4_400M_050219_1,4746,GQINPNSGY False True GQINPNSGY 23.366655 475.222430408001 586298.25 4744.0 nc|ENSG00000143379|Q15047-3|SETDB1;;ENSG00000143379|ENST00000692827|SETDB1;;nc|ENSG00000143379|Q15047|SETDB1 5.4238448937733965 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4747 23.371 203.0 346530.0 25 0 110970.0 -1 0 86 474.2903619699933 473.2830855033933 1 474.2883178591728 MULTI CID FTMS 0 0 0 4744 136795.140625 0.2845512672003752 29 -0.5627269744873047 3 5 [{I|L}T][Q{I|L}] 4 -1 + 15.272 0.0 0.0 3.2269 3.2269 83.8 0.0 0.0 0.0 0.6683417370659939 2.48075411082187 0.6683417370659939 11.10471070645442 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}T][Q{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}{NN|[MP]|[D{I|L}]|[EV]};[Q{I|L}][{I|L}T] 3.2269;0.8806;0.0092224 -;-;- 59 1 2.871 61241.7 1.0 1012 3733 4744 SUDHL4_400M_050219_1,4747 SUDHL4_400M_050219_1,4747, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4748 23.384 800.0 162460.0 25 0 39396.0 + 40246 VGSSGATR 8 73 734.3784063062002 733.3711298396001 1 734.3773681521416 MULTI CID FTMS 0 0 0 4744 101236.2109375 0.3290062525795978 -11 0.1234302520751953 4 Unmodified _VGSSGATR_ REV__ENSG00000113083|ENST00000231004|LOX 2.577480529830294 0.808687252328423 5 EP{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 6 -1 + 60.423 0.0 0.0 8.2391 8.2391 97.976 0.0 0.0 0.0 39.97277664392469 6.478174818886373 6.478174818886373 34.01191198810224 0 1.305462187404089 1.3010299956639813 0.5941876774005248 0.0 EP{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[EP][PA]{I|L}[HA];[EP]{I|L}[PA][HA];EVT{I|L}{I|L}C(Carbamidomethyl (C));[KT]TQQE;[TP]{I|L}{M(Oxidation (M))|F}KE;[KT][DN]KE;[KT]{M(Oxidation (M))|F}[{I|L}P]E;[{M(Oxidation (M))|F}T][{I|L}P]KE;[{M(Oxidation (M))|F}T]K[{I|L}P]E 8.2391;3.6014;2.8998;1.5142;1.3636;1.2509;0.86185;0.86185;0.53422;0.53422 -;-;-;-;-;-;-;-;-;- 159 + 1 2.871 95963.0 0.5899999737739563 1013 3733 4744 SUDHL4_400M_050219_1,4748 SUDHL4_400M_050219_1,4748,VGSSGATR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4750 23.39 142.0 303010.0 25 0 18254.0 27048 PEQNDRTPL 9 84 535.2673260703511 1068.5200992075022 2 535.2675048708916 MULTI CID FTMS 0 0 0 4749 297441.125 0.3287196412047086 8 -0.099161148071289 1 Unmodified _PEQNDRTPL_ ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;ENST00000544562.5_1_14:23067206-23078652:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4 19.256988751693697 0.3154191944385105 5 A{I|L} 2 8 22.831 0.0 0.0 2.1367 0.0 0.0 866.3877272366022 0.0 866.3877272366022 0.0 5.351584312837048 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 A{I|L} 2.1367 - 40 + 1 2.871 39007.0 1.0 1014 3734 4749 SUDHL4_400M_050219_1,4750 SUDHL4_400M_050219_1,4750,PEQNDRTPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4751 23.397 379.0 335090.0 25 0 33204.0 + 26361 NSRLAAWVR 9 168 358.20608795121603 0 358.2061950564384 PEAK CID FTMS 0 0 0 4749 72868.453125 0.2208274842411891 22 -0.420389175415039 2 Unmodified _NSRLAAWVR_ REV__ENSG00000196943|ENST00000267425|NOP9;REV__nc|ENSG00000196943|Q86U38-2|NOP9 3.944395688203298 0.3444685223463734 5 Q 1 -1 2.4743 0.0 0.0 0.34634 0.0 0.0 357.2020468476256 226.11994348697505 583.3219903346006 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.34634 - 5 + 1 2.871 102014.2 1.0 1015 3734 4749 SUDHL4_400M_050219_1,4751 SUDHL4_400M_050219_1,4751,NSRLAAWVR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4752 23.399 113.0 626610.0 25 0 52041.0 18643 LAGPPIPY 8 95 414.23763068564347 826.460708438087 2 414.2375060915947 MULTI CID FTMS 0 0 0 4749 335230.6875 0.2370701375545681 -11 0.1501350402832031 3 Unmodified _LAGPPIPY_ ENSG00000187550|ENST00000413299|SBK2 24.20995872069341 0.5349487244130675 5 [{I|L}A]GP[RN]S{I|L} 8 4 + 57.323 0.0 0.0 6.936 6.936 95.732 0.0 0.0 0.0 40.13039018599259 11.297443431192214 11.297443431192214 29.23516269895728 0 0.3494850021680094 2.0 0.6203715150305281 0.0 [{I|L}A]GP[RN]S{I|L};[{I|L}A][HT][VS]S{I|L};[{I|L}A]GPG[QT][{I|L}A];[{I|L}A][NP][QT][{I|L}A];[PG][Q{I|L}][QT][{I|L}A] 6.936;3.3986;3.1176;1.9811;0.070289 -;-;-;-;- 116 + 1 2.871 63404.7 1.0 1016 3734 4749 SUDHL4_400M_050219_1,4752 SUDHL4_400M_050219_1,4752,LAGPPIPY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4753 23.404 278.0 405730.0 25 0 37257.0 + + 30969 RIAPPDRRF 9 115 376.5523759322736 1126.6352983970207 3 376.5524169802666 MULTI CID FTMS 0 0 0 4749 155311.453125 0.1638630779905147 -12 0.154184341430664 4 Unmodified _RLAQRRQAE_ nc|ENSG00000196313|Q96HA1-3|POM121;nc|ENSG00000196313|Q96HA1-2|POM121;ENSG00000272391|ENST00000615331|POM121C;ENSG00000196313|ENST00000434423|POM121;nc|ENSG00000272391|A8CG34|POM121C;nc|ENSG00000146707|Q6PJE2-5|POMZP3;ENSG00000146707|ENST00000310842|POMZP3 10.150570793230772 0.5619192000662246 5 RE 2 -1 25.217 0.0 0.0 2.2382 0.0 0.0 823.4642102466217 0.0 823.4642102466217 0.0 11.571362609069736 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 RE 2.2382 - 36 1 2.871 95850.0 1.0 1017 3734 4749 SUDHL4_400M_050219_1,4753 SUDHL4_400M_050219_1,4753,RLAQRRQAE False False RIAPPDRRF 23.404049 376.552416980267 18352899.0 4749.0 nc|ENSG00000196313|Q96HA1-3|POM121;;nc|ENSG00000196313|Q96HA1-2|POM121;;ENSG00000272391|ENST00000615331|POM121C;;ENSG00000196313|ENST00000434423|POM121;;nc|ENSG00000272391|A8CG34|POM121C;;nc|ENSG00000146707|Q6PJE2-5|POMZP3;;ENSG00000146707|ENST00000310842|POMZP3 6.803927103678386 3.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4755 23.413 367.0 234220.0 25 0 16353.0 + 10667 FVQLCPYKGQG 11 99 620.3133614553385 1238.612169977477 2 620.3134033083916 MULTI CID FTMS 0 0 0 4754 172680.21875 0.5299328291886191 -29 0.3447475433349609 1 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 5 {[HG]|PP}AMPPPPPPQN 12 -1 {[HG]|PP}AM + + 70.977 11.427 2.8842 5.7304 5.7304 61.413 0.0 0.0 0.0 0.0 55.69410143938468 0.0 0.0 0 2.274227503252014 0.0 0.0 1.5941876774005248 {[HG]|PP}AMPPPPPPQN 5.7304 - 1437 + 1 2.871 66820.6 1.0 1018 3735 4754 SUDHL4_400M_050219_1,4755 SUDHL4_400M_050219_1,4755,FVQLCPYKGQG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4756 23.419 310.0 198690.0 25 0 27724.0 + 40846 VLNQSPAI 8 97 421.24276092511496 840.47096891703 2 421.2428466677666 MULTI CID FTMS 0 0 0 4754 102107.1875 0.656166966993743 -5 0.073944091796875 2 Unmodified _VLNQSPAI_ REV__ENSG00000198646|ENST00000359003|NCOA6 21.74664581756881 0.5868176546531598 5 [KP]TQ[PS]A{I|L} 8 -1 + 30.111 0.0 0.0 3.5826 3.5826 83.822 0.0 0.0 0.0 1.3996998762537771 18.121374995494293 1.3996998762537771 9.262137858390812 0 0.9247425010840048 0.0 0.5 0.0 [KP]TQ[PS]A{I|L};[KP]T[AG][PS]A{I|L};[PS]AAK[PS]A{I|L};[KP]A{[SA]|[TG]}[PS]A{I|L};[KP]G[TA][PS]A{I|L} 3.5826;2.4806;1.9527;1.649;1.3453 -;-;-;-;- 50 1 2.871 51518.7 1.0 1019 3735 4754 SUDHL4_400M_050219_1,4756 SUDHL4_400M_050219_1,4756,VLNQSPAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4760 23.432 102.0 702330.0 25 0 222760.0 + -1 LAMRVQEL 8 70 488.2685643156195 0 488.2684814333916 PEAK CID FTMS 0 0 0 4759 502086.65625 0.5635523613026728 12 -0.2404060363769531 1 Oxidation (M) _LAM(Oxidation (M))RVQEL_ REV__ENSG00000109689|ENST00000467087|STIM2;REV__nc|ENSG00000109689|Q9P246-2|STIM2;REV__nc|ENSG00000109689|Q9P246-3|STIM2 8.593279151180031 0.5573742999696857 5 P 1 -1 3.0989 0.0 0.0 0.318 0.0 0.0 622.299597037686 252.1465853326781 874.4461823703641 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.318 - 9 + 1 2.871 59855.6 1.0 1020 3738 4759 SUDHL4_400M_050219_1,4760 SUDHL4_400M_050219_1,4760,LAMRVQEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4763 23.452 800.0 157490.0 25 0 34105.0 -1 EVVTICDLI 9 140 531.281488268952 1060.548423604704 2 531.7837402224541 MULTI CID FTMS 0 0 0 4762 103032.234375 1.0 0 0.0 1 Carbamidomethyl (C) _EVVTIC(Carbamidomethyl (C))DLI_ ENSG00000153551|ENST00000334983|CMTM7;nc|ENSG00000153551|Q96FZ5-2|CMTM7 11.640296217721598 0.521594087909532 5 T{M(Oxidation (M))|F}[VG] 4 -1 14.693 0.0 0.0 1.3854 0.0 0.0 638.3661553935696 0.0 638.3661553935696 0.0 -1.145483207957767 -1.145483207957767 0.0 0 0.0 0.0 0.0 0.0 T{M(Oxidation (M))|F}[VG] 1.3854 - 776 + 1 2.871 98850.4 0.6100000143051147 1021 3740 4762 SUDHL4_400M_050219_1,4763 SUDHL4_400M_050219_1,4763,EVVTICDLI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4764 23.466 800.0 139440.0 25 0 8913.6 -1 0 104 683.3616467561013 682.3543702895013 1 683.3624145388603 MULTI CID FTMS 0 0 0 4762 107913.0078125 0.6579840159720238 -1 0.0040321350097656 2 5 {I|L}VTSTY 6 -1 + 78.96 0.0 0.0 11.572 11.572 97.95 0.0 0.0 0.0 50.348994499840266 13.187587626244124 13.187587626244124 15.468924968190294 0 1.4947026752325154 1.6989700043360187 1.2689301784845295 0.0 {I|L}VTSTY;[{I|L}V]TSTY;{[TV]|[{I|L}S]}{I|L}STY;[YT]STV{I|L};{[MG]|[TS]}T{I|L}VY;{[MG]|[TS]}[{I|L}V]TY;{[MG]|[TS]}TYV{I|L};{[MG]|[TS]}YTV{I|L} 11.572;9.3047;5.1165;4.1143;3.8194;3.5192;3.3498;3.1375 -;-;-;-;-;-;-;- 231 + 1 2.871 84983.5 0.6499999761581421 1022 3740 4762 SUDHL4_400M_050219_1,4764 SUDHL4_400M_050219_1,4764, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4765 23.48 800.0 94511.0 25 0 11305.0 + 14960 ILNQDAKNY 9 127 539.7805774352 0 539.7803222537041 PEAK CID FTMS 0 0 0 4762 88526.640625 1.0 0 0.0 3 Unmodified _ILNQDAKNY_ ENSG00000168522|ENST00000302279|FNTA;ENST00000526755.5_1_8:42911676-42932640:+|nuORF;ENST00000530657.1_1_11:85906626-85907241:+|nuORF;nc|ENSG00000168522|P49354-2|FNTA 43.85829265575387 0.0484669621479465 5 NKAD 4 7 14.227 0.0 0.0 1.3203 0.0 0.0 407.24345359911246 239.07850061588127 646.3219542149938 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.3807196863200844 NKAD 1.3203 - 87 + 1 2.871 61747.5 0.6200000047683716 1023 3740 4762 SUDHL4_400M_050219_1,4765 SUDHL4_400M_050219_1,4765,ILNQDAKNY True True ILNQDAKNY 23.479599 539.780322253704 2537845.0 4762.0 ENST00000526755.5_1_8:42911676-42932640:+|nuORF;;ENST00000530657.1_1_11:85906626-85907241:+|nuORF;;ENSG00000168522|ENST00000302279|FNTA;;nc|ENSG00000168522|P49354-2|FNTA 5.328169822692871 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4768 23.49 222.0 304210.0 25 0 49416.0 + 5075 DGYEQAARV 9 82 504.7412046585456 1007.4678563838912 2 504.7408019900322 MULTI CID FTMS 0 0 0 4767 151050.53125 0.6995062185950692 -2 0.0479640960693359 1 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 36.12702656103203 0.0967173616627612 5 [YG]DEQAA[RV] 9 2 [YG]D + + 30.028 -0.95893 -0.28615 2.9805 2.9805 54.136 0.0 0.0 0.0 0.0 6.075090722850263 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.6421590589602533 [YG]DEQAA[RV] 2.9805 - 87 + 1 2.862 54334.7 1.0 1024 3742 4767 SUDHL4_400M_050219_1,4768 SUDHL4_400M_050219_1,4768,DGYEQAARV True True DGYEQAARV 23.490248 504.740801990032 1014695.1875 4767.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 5.825512409210205 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4769 23.504 800.0 320890.0 25 0 20804.0 + 1225 ALDTTRHEL 9 281 352.5209536604723 1054.5410315816168 3 352.5209228396416 MULTI CID FTMS 0 0 0 4767 146109.515625 1.0 0 0.0 2 Unmodified _AIIDAPMDIP_ ENSG00000131351|ENST00000253669|HAUS8;nc|ENSG00000131351|Q9BT25-3|HAUS8;nc|ENSG00000131351|Q9BT25-2|HAUS8 32.30548876998284 0.2428506522065767 5 A{I|L}{I|L}{M(Oxidation (M))|F}H[KC]E 8 7 65.329 0.0 0.0 6.195 0.0 0.0 0.0 110.06170068912344 110.06170068912344 32.523656471886326 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.9049471895720984 0.3807196863200844 A{I|L}{I|L}{M(Oxidation (M))|F}H[KC]E 6.195 - 891 + 1 2.862 199674.2 0.4699999988079071 1025 3742 4767 SUDHL4_400M_050219_1,4769 SUDHL4_400M_050219_1,4769,AIIDAPMDIP False False ALDTTRHEL 23.504065 352.520922839642 1281061.8125 4767.0 ENSG00000131351|ENST00000253669|HAUS8;;nc|ENSG00000131351|Q9BT25-3|HAUS8;;nc|ENSG00000131351|Q9BT25-2|HAUS8 5.878787358601888 3.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4770 23.518 800.0 122450.0 25 0 11295.0 + 11257 GESSGKNVTL 10 156 496.25675476908464 990.4989566049692 2 496.2566100955009 MULTI CID FTMS 0 0 0 4767 103071.9296875 1.0 0 0.0 3 Unmodified _GESSGKNVTL_ ENSG00000174444|ENST00000307961|RPL4;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF 53.40400417844725 0.0601721406801337 5 {[DA]|[EG]}S 3 7 35.234 0.0 0.0 3.5572 0.0 0.0 0.0 714.3802791970193 714.3802791970193 10.783409326844264 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.3494850021680094 0.0 + {[DA]|[EG]}S 3.5572 + + 599 1 2.862 78804.2 0.6200000047683716 1026 3742 4767 SUDHL4_400M_050219_1,4770 SUDHL4_400M_050219_1,4770,GESSGKNVTL True True GESSGKNVTL 23.51788 496.256610095501 503715.65625 4767.0 ENST00000566622.5_1_15:66794044-66797161:-|nuORF;;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;;ENSG00000174444|ENST00000307961|RPL4;;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;;ENST00000567229.5_1_15:66795359-66797161:-|nuORF 4.305995543797811 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4772 23.534 800.0 35921.0 25 0 7645.6 -1 0 37 1154.804379394752 3461.391308784456 3 1155.480029284954 MULTI CID FTMS 0 0 0 4771 91475.203125 0.0519713433149149 51 -1.361652374267578 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.862 31713.2 0.3799999952316284 1027 3743 4771 SUDHL4_400M_050219_1,4772 SUDHL4_400M_050219_1,4772, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4773 23.539 289.0 243430.0 25 0 16755.0 + 1434 ALDTTRHEL 9 109 528.2786695953448 1054.5427862574895 2 528.2796508669853 MULTI CID FTMS 0 0 0 4771 133035.953125 1.0 0 0.0 2 Unmodified _ALDTTRHEL_ ENSG00000131351|ENST00000253669|HAUS8;nc|ENSG00000131351|Q9BT25-2|HAUS8;nc|ENSG00000131351|Q9BT25-3|HAUS8 31.635753872319068 0.1286659907112723 5 [{I|L}A]D{NN|[MP]|[D{I|L}]|[EV]}{[QS]|[NT]}V 8 6 37.98 0.0 0.0 3.6016 0.0 0.0 0.0 210.11112056828952 210.11112056828952 9.039843494254995 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.6747425010840047 0.0 [{I|L}A]D{NN|[MP]|[D{I|L}]|[EV]}{[QS]|[NT]}V 3.6016 - 242 1 2.862 57147.0 1.0 1028 3743 4771 SUDHL4_400M_050219_1,4773 SUDHL4_400M_050219_1,4773,ALDTTRHEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4774 23.553 800.0 156790.0 25 0 22037.0 + 30775 RIAPPDRRF 9 119 564.3250353337046 1126.635517734209 2 564.3254882693291 MULTI CID FTMS 0 0 0 4771 125266.125 0.8551985184440847 -2 0.0382099151611328 3 Unmodified _RIAPPDRRF_ ENSG00000146707|ENST00000310842|POMZP3;ENSG00000196313|ENST00000434423|POM121;ENSG00000272391|ENST00000615331|POM121C;nc|ENSG00000146707|Q6PJE2-5|POMZP3;nc|ENSG00000196313|Q96HA1-2|POM121;nc|ENSG00000196313|Q96HA1-3|POM121;nc|ENSG00000272391|A8CG34|POM121C 21.59015148037692 0.2564810811560323 5 [{I|L}V][HQ]SA{I|L}GR{M(Oxidation (M))|F} 10 7 + 53.835 0.0 0.0 4.7784 4.7784 76.936 0.0 0.0 0.0 15.91051766099227 42.240918700215886 15.91051766099227 0.4279658357564386 0 1.0924778212679485 2.0 0.8807196863200843 0.0 [{I|L}V][HQ]SA{I|L}GR{M(Oxidation (M))|F};[{I|L}V][HQ]S[Q{I|L}]R{M(Oxidation (M))|F};[{I|L}V][HQ][TA]RR{M(Oxidation (M))|F} 4.7784;4.7404;4.6068 -;-;- 241 1 2.862 97581.2 0.5799999833106995 1029 3743 4771 SUDHL4_400M_050219_1,4774 SUDHL4_400M_050219_1,4774,RIAPPDRRF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4775 23.567 800.0 53690.0 25 0 14877.0 -1 0 40 1166.8264641363 3497.4575630091003 3 1167.158007800579 MULTI CID FTMS 0 0 0 4771 73462.078125 0.7848394050537264 -1 0.0342559814453125 4 5 G 1 -1 6.9897 0.0 0.0 0.19985 0.0 0.0 2147.7556669869923 1289.6609733220257 3437.4166403090176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19985 - 4 + 1 2.862 43602.8 0.3499999940395355 1030 3743 4771 SUDHL4_400M_050219_1,4775 SUDHL4_400M_050219_1,4775, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4777 23.58 504.0 286510.0 25 0 74663.0 -1 0 147 510.3275839506685 509.3203074840685 1 510.3275024294853 MULTI CID FTMS 0 0 0 4776 184499.578125 0.5004513311662883 10 -0.2298545837402343 1 5 GY 2 -1 16.454 0.0 0.0 3.2305 0.0 0.0 271.22473971238725 0.0 271.22473971238725 0.0 3.6894403518319407 0.0 0.0 0 0.0 0.0 0.0 0.0 GY 3.2305 - 58 + 1 2.853 113220.1 1.0 1031 3744 4776 SUDHL4_400M_050219_1,4777 SUDHL4_400M_050219_1,4777, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4778 23.582 97.0 739630.0 25 0 132510.0 -1 0 77 432.2417931977939 431.23451673119393 1 432.2427245974541 MULTI CID FTMS 0 0 0 4776 328406.8125 0.9692467363722566 -5 0.1355743408203125 2 5 V[DN] 3 -1 1.4267 0.0 0.0 0.33084 0.0 0.0 85.08979232002109 0.0 85.08979232002109 0.0 1.426675035687312 0.0 0.0 0 0.0 0.0 0.0 0.0 V[DN] 0.33084 - 5 1 2.853 64850.4 1.0 1032 3744 4776 SUDHL4_400M_050219_1,4778 SUDHL4_400M_050219_1,4778, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4779 23.596 800.0 42828.0 25 0 9216.2 -1 0 38 1164.135207876427 3489.3837942294813 3 1164.802661120892 MULTI CID FTMS 0 0 0 4776 122271.484375 1.0 0 0.0 3 5 G 1 -1 6.9897 0.0 0.0 0.20031 0.0 0.0 2175.750837508469 1253.5871065729127 3429.3379440813824 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20031 - 2 + 1 2.853 37449.4 0.4199999868869781 1033 3744 4776 SUDHL4_400M_050219_1,4779 SUDHL4_400M_050219_1,4779, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4782 23.609 389.0 240420.0 25 0 20378.0 + 43280 RVFDHKQGTYGGY 13 122 509.91628210089095 1526.727016902873 3 509.9157897830009 MULTI CID FTMS 0 0 0 4781 123437.1484375 0.3959360953312586 -5 0.1199760437011718 1 Unmodified _WHSYINFELRY_ ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENSG00000184110|ENST00000331666|EIF3C 4.715918219556657 0.8528979259967293 5 GGY 3 10 34.737 0.0 0.0 2.2753 0.0 0.0 1231.6098426858791 0.0 1231.6098426858791 0.0 14.023722004121453 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 GGY 2.2753 - 432 + 1 2.853 86513.8 1.0 1034 3746 4781 SUDHL4_400M_050219_1,4782 SUDHL4_400M_050219_1,4782,WHSYINFELRY False False RVFDHKQGTYGGY 23.60905 509.915789783001 2034890.625 4781.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 5.9956901868184405 3.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4783 23.623 800.0 148350.0 25 0 16743.0 + 35097 SQVPQQSHF 9 128 529.2565197385682 1056.4984865439362 2 529.2577392458916 MULTI CID FTMS 0 0 0 4781 90414.0546875 0.5695708763173265 9 -0.2013320922851562 2 Unmodified _SQVPQQSHF_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 24.99096001346401 0.2132109383330889 5 {[QS]|[NT]}V 3 6 35.062 0.0 0.0 3.3187 0.0 0.0 0.0 739.3159663625487 739.3159663625487 17.102868501927873 0.0 0.0 0.0 0 0.9247425010840048 1.0 0.1861818737241735 0.3494850021680094 + {[QS]|[NT]}V 3.3187 + + 644 1 2.853 93130.8 0.6600000262260437 1035 3746 4781 SUDHL4_400M_050219_1,4783 SUDHL4_400M_050219_1,4783,SQVPQQSHF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4785 23.636 585.0 275360.0 25 0 88891.0 -1 0 122 470.25903194521305 469.25175547861306 1 470.2573425173759 MULTI CID FTMS 0 0 0 4784 143182.390625 0.0993172938778306 67 -1.6790313720703125 1 5 [PA]T 3 -1 19.922 0.0 0.0 4.2454 0.0 0.0 0.0 197.0909027776943 197.0909027776943 6.733937431123284 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [PA]T 4.2454 - 52 1 2.853 129054.8 1.0 1036 3747 4784 SUDHL4_400M_050219_1,4785 SUDHL4_400M_050219_1,4785, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4788 23.656 800.0 189930.0 25 0 20321.0 + 17223 KLLGKVETA 9 162 479.80011624547 957.58567955774 2 479.8005859255791 MULTI CID FTMS 0 0 0 4787 130127.8515625 0.4588102585698347 -2 0.0167522430419921 1 Unmodified _KLLGKVETA_ ENSG00000129696|ENST00000431156|TTI2 49.55428908609986 0.0413471690215031 5 [K{I|L}]GVE{I|L}K[TA] 9 4 + 43.781 0.0 0.0 4.572 4.572 78.867 0.0 0.0 0.0 2.4819684649020246 10.12690423492623 2.4819684649020246 2.218487496163561 0 1.0 0.8239087409443188 0.0 0.2742275032520141 [K{I|L}]GVE{I|L}K[TA];[K{I|L}]GV{I|L}EK[TA];[K{I|L}]{I|L}GD{I|L}K[TA];[K{I|L}]G{I|L}D{I|L}K[TA];[K{I|L}]{I|L}GVEK[TA];[K{I|L}]G{I|L}VEK[TA];[K{I|L}]GD{I|L}{I|L}K[TA];{[VA]|[{I|L}G]}KVE{I|L}K[TA];{[VA]|[{I|L}G]}KV{I|L}EK[TA];[K{I|L}]{I|L}GK{NN|[MP]|[D{I|L}]|[EV]}[TA] 4.572;4.3403;4.2815;4.0737;4.0498;3.8421;3.5277;3.087;2.8553;2.8217 -;-;-;-;-;-;-;-;-;+ + 1515 1 2.853 117997.8 0.6800000071525574 1037 3749 4787 SUDHL4_400M_050219_1,4788 SUDHL4_400M_050219_1,4788,KLLGKVETA True True KLLGKVETA 23.655916 479.800585925579 1239788.625 4787.0 ENSG00000129696|ENST00000431156|TTI2 3.987172285715739 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4789 23.659 179.0 339080.0 25 0 42070.0 + 38899 GQRKGAGSVF 10 82 503.7752922054669 1005.5360314777338 2 503.7754089236259 MULTI CID FTMS 0 0 0 4787 175823.890625 0.7585770038918034 -2 0.0167522430419921 2 Unmodified _TVLEDIAVF_ ENST00000531767.1_1_8:146017155-146017514:-|nuORF;ENSG00000161016|ENST00000528957|RPL8;ENST00000525232.5_1_8:146017155-146017514:-|nuORF 21.74664581756881 0.2544899275067181 5 SV{M(Oxidation (M))|F} 3 7 29.526 0.0 0.0 2.9363 0.0 0.0 654.3527088849625 0.0 654.3527088849625 0.0 18.812281309285623 0.0 0.0 0 0.7614393726401688 0.0 0.5 0.0 SV{M(Oxidation (M))|F} 2.9363 - 88 1 2.853 52625.7 1.0 1038 3749 4787 SUDHL4_400M_050219_1,4789 SUDHL4_400M_050219_1,4789,TVLEDIAVF False False GQRKGAGSVF 23.659387 503.775408923626 1445795.75 4787.0 ENST00000531767.1_1_8:146017155-146017514:-|nuORF;;ENSG00000161016|ENST00000528957|RPL8;;ENST00000525232.5_1_8:146017155-146017514:-|nuORF 2.7168311278025308 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4790 23.667 438.0 275590.0 25 0 74793.0 + + 3516 KTKGGSKYLIYR 12 117 472.2728216643431 0 472.2728149294853 PEAK CID FTMS 0 0 0 4787 142352.734375 0.3341606864481709 -19 0.3094520568847656 3 Unmodified _CRVLVGPSL_ nc|ENSG00000100365|Q15080-3|NCF4;ENSG00000100365|ENST00000248899|NCF4 10.823927491677226 0.3028200641087142 5 V 1 -1 6.9897 0.0 0.0 0.74159 0.0 0.0 601.3609681804456 239.0791720026 840.4401401830456 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.74159 + + 33 + 1 2.853 96271.0 1.0 1039 3749 4787 SUDHL4_400M_050219_1,4790 SUDHL4_400M_050219_1,4790,CRVLVGPSL False False KTKGGSKYLIYR 23.667164 472.272814929485 215778.375 4787.0 nc|ENSG00000100365|Q15080-3|NCF4;;ENSG00000100365|ENST00000248899|NCF4 1.1786990364392598 3.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4792 23.672 62.0 1162800.0 25 0 141480.0 + 30776 RIAPPDRRF 9 78 376.5523759322736 1126.6352983970207 3 376.5522949099541 MULTI CID FTMS 0 0 0 4791 715054.875 0.7544266079032783 4 -0.1297874450683593 1 Unmodified _RIAPPDRRF_ ENSG00000146707|ENST00000310842|POMZP3;ENSG00000196313|ENST00000434423|POM121;ENSG00000272391|ENST00000615331|POM121C;nc|ENSG00000146707|Q6PJE2-5|POMZP3;nc|ENSG00000196313|Q96HA1-2|POM121;nc|ENSG00000196313|Q96HA1-3|POM121;nc|ENSG00000272391|A8CG34|POM121C 11.517880264261096 0.5249077435482886 5 R{I|L}[KG]PDH 7 5 30.491 0.0 0.0 2.7064 0.0 0.0 0.0 320.17218958072505 320.17218958072505 19.52182065433508 0.0 0.0 0.0 0 0.5269763493273799 0.0 0.0 0.0 R{I|L}[KG]PDH 2.7064 - 68 + 1 2.853 67424.7 1.0 1040 3750 4791 SUDHL4_400M_050219_1,4792 SUDHL4_400M_050219_1,4792,RIAPPDRRF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4793 23.686 800.0 196470.0 25 0 15366.0 + 10668 FVQLCPYKGQG 11 125 620.3133614553385 1238.612169977477 2 620.3130370974541 MULTI CID FTMS 0 0 0 4791 154809.1875 0.4750889899846527 -14 0.2482814788818359 2 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 5 [QP]NGPPPPPPQN 12 -1 [QP]NG + + 78.591 13.945 3.5198 6.3451 6.3451 62.962 0.0 0.0 0.0 0.0 53.40940131247129 0.0 0.0 0 2.6989700043360187 0.0 0.0 1.6298545532927076 [QP]NGPPPPPPQN 6.3451 - 3634 + 1 2.853 118615.8 0.6499999761581421 1041 3750 4791 SUDHL4_400M_050219_1,4793 SUDHL4_400M_050219_1,4793,FVQLCPYKGQG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4794 23.7 800.0 118880.0 25 0 23581.0 + -1 YQKQPKIGY 9 139 562.8223458166564 2247.2602774002253 4 563.0723144412041 MULTI CID FTMS 0 0 0 4791 116386.7421875 1.0 0 0.0 3 nc|ENSG00000143624|Q68E01|INTS3;nc|ENSG00000143624|Q68E01-3|INTS3;ENSG00000143624|ENST00000318967|INTS3;nc|ENSG00000143624|Q68E01-4|INTS3 5 SY 2 -1 17.959 0.0 0.0 0.79914 0.0 0.0 1979.154206583073 0.0 1979.154206583073 0.0 4.084850188786502 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 0.79914 - 367 + 1 2.853 78334.1 0.550000011920929 1042 3750 4791 SUDHL4_400M_050219_1,4794 SUDHL4_400M_050219_1,4794, False False YQKQPKIGY 23.699633 563.072314441204 355579.375 4791.0 nc|ENSG00000143624|Q68E01|INTS3;;nc|ENSG00000143624|Q68E01-3|INTS3;;ENSG00000143624|ENST00000318967|INTS3;;nc|ENSG00000143624|Q68E01-4|INTS3 1.3157924711704254 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4795 23.713 800.0 34584.0 25 0 6350.8 -1 0 45 1100.794467733839 3299.361573801717 3 1101.129077136517 MULTI CID FTMS 0 0 0 4791 84208.8203125 0.5466189608471219 -2 0.031625747680664 4 5 G 1 -1 5.4846 0.0 0.0 0.16623 0.0 0.0 1694.6006617917544 1544.7050978844825 3239.305759676237 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.16623 - 4 + 1 2.853 38033.0 0.3899999856948852 1043 3750 4791 SUDHL4_400M_050219_1,4795 SUDHL4_400M_050219_1,4795, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4796 23.72 356.0 180110.0 25 0 18623.0 + + 40960 VILRDSHGV 9 100 498.2875712286015 994.560589524003 2 498.2863952517509 MULTI CID FTMS 0 0 0 4791 84045.65625 1.0 0 0.0 5 Unmodified _VLVQHLMGV_ ENSG00000110700|ENST00000525634|RPS13;ENST00000531908.5_1_11:17095982-17097186:-|nuORF;ENST00000526895.5_1_11:17095982-17099246:-|nuORF 21.74664581756881 0.2544899275067181 5 V{I|L}{[RE]|[WV]}WHS 7 -1 53.182 0.0 0.0 5.3473 0.0 0.0 0.0 84.04621301822499 84.04621301822499 39.905464572690434 0.0 0.0 0.0 0 1.0269763493273798 2.0 0.7742275032520141 0.0 V{I|L}{[RE]|[WV]}WHS 5.3473 - 148 + 1 2.853 54473.6 1.0 1044 3750 4791 SUDHL4_400M_050219_1,4796 SUDHL4_400M_050219_1,4796,VLVQHLMGV False False VILRDSHGV 23.719905 498.286395251751 542482.75 4791.0 ENSG00000110700|ENST00000525634|RPS13;;ENST00000531908.5_1_11:17095982-17097186:-|nuORF;;ENST00000526895.5_1_11:17095982-17099246:-|nuORF 1.9738237857818604 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4798 23.73 326.0 285200.0 25 0 19635.0 + 29119 QERPSVTSY 9 128 533.7616432546691 1065.5087335761382 2 533.7615234255791 MULTI CID FTMS 0 0 0 4797 148072.8125 0.4612603797043603 7 -0.1279811859130859 1 Unmodified _QERPSVTSY_ ENSG00000196510|ENST00000455511|ANAPC7;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 41.8396318013385 0.0653578398400075 5 YTSY 4 6 48.998 0.0 0.0 4.5986 0.0 0.0 533.3016224591812 0.0 533.3016224591812 0.0 40.07219135276041 0.0 0.0 0 1.0 0.0 0.7059771852360797 0.0 YTSY 4.5986 - 383 1 2.855 76760.7 1.0 1045 3751 4797 SUDHL4_400M_050219_1,4798 SUDHL4_400M_050219_1,4798,QERPSVTSY True True QERPSVTSY 23.729735 533.761523425579 2088106.875 4797.0 nc|ENSG00000196510|Q9UJX3-2|ANAPC7;;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;;ENSG00000196510|ENST00000455511|ANAPC7 2.2173011104265847 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4799 23.744 800.0 111500.0 25 0 9083.0 -1 VFRCGGCQDAF 11 114 630.2679656617255 1258.521378390251 2 630.2681762576103 MULTI CID FTMS 0 0 0 4797 85175.7890625 0.6258806819225583 -8 0.2021389007568359 2 Carbamidomethyl (C) _VFRC(Carbamidomethyl (C))GGCQDAF_ ENST00000361972.8_1_10:7203714-7204119:-|nuORF 26.268140514670165 0.4754186812857754 5 [AG]AHDEAQENA{M(Oxidation (M))|F} 12 -1 + 98.578 0.0 0.0 7.8328 7.8328 90.1 0.0 0.0 0.0 6.622819763437562 16.611814434466197 6.622819763437562 5.000452295863553 0 1.2302046884880935 1.6989700043360187 1.055462187404089 0.7742275032520141 [AG]AHDEAQENA{M(Oxidation (M))|F};[AG]AHDEQAENA{M(Oxidation (M))|F};[AG]AHDEAGAENA{M(Oxidation (M))|F};[AG]D[HA]EAQENA{M(Oxidation (M))|F};[QA]HDEAGAENA{M(Oxidation (M))|F};[AG]AHDEAQQDA{M(Oxidation (M))|F};[QA]HDEAQENA{M(Oxidation (M))|F};[AG]AHDEAQEGGA{M(Oxidation (M))|F};[AG]D[HA]EQAENA{M(Oxidation (M))|F};[AG]D[HA]EAGAENA{M(Oxidation (M))|F} 7.8328;7.4355;7.4114;7.3789;7.3066;7.2708;7.1751;7.1099;6.9815;6.9574 -;-;-;-;-;-;-;-;-;- 6370 1 2.855 69552.5 0.5 1046 3751 4797 SUDHL4_400M_050219_1,4799 SUDHL4_400M_050219_1,4799,VFRCGGCQDAF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4800 23.751 442.0 180920.0 25 0 18058.0 + 12058 GQERPSVTSY 10 96 562.2715714745533 1122.5285900159065 2 562.2723876833916 MULTI CID FTMS 0 0 0 4797 153314.859375 0.4305667403281946 -8 0.2021389007568359 3 Unmodified _GQERPSVTSY_ ENSG00000196510|ENST00000455511|ANAPC7;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 33.4449034751529 0.2267874087365337 5 EVTSY 5 5 51.498 0.0 0.0 4.5877 0.0 0.0 525.276170799025 0.0 525.276170799025 0.0 37.30204688488094 0.0 0.0 0 1.0 0.0 0.805462187404089 0.0 EVTSY 4.5877 - 125 1 2.855 65782.6 1.0 1047 3751 4797 SUDHL4_400M_050219_1,4800 SUDHL4_400M_050219_1,4800,GQERPSVTSY False True GQERPSVTSY 23.751447 562.272387683392 2413279.0 4797.0 nc|ENSG00000196510|Q9UJX3-2|ANAPC7;;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;;ENSG00000196510|ENST00000455511|ANAPC7 3.269329071044922 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4801 23.758 344.0 162290.0 25 0 36922.0 -1 0 86 454.2665350252299 453.25925855862994 1 454.2648803591728 MULTI CID FTMS 0 0 0 4797 110891.515625 0.2096172892203882 9 -0.1502189636230468 4 5 {M(Oxidation (M))|F} 1 -1 11.594 0.0 0.0 2.5579 0.0 0.0 288.1793157869487 0.0 288.1793157869487 0.0 0.3347339481530653 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.5579 - 11 + 1 2.855 46623.9 1.0 1048 3751 4797 SUDHL4_400M_050219_1,4801 SUDHL4_400M_050219_1,4801, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4804 23.768 213.0 350980.0 25 0 51938.0 + 38739 TVADKIHSV 9 86 485.2709714590622 968.5273899849244 2 485.2721740603447 MULTI CID FTMS 0 0 0 4803 180239.21875 0.2562124348469399 -7 0.1621208190917968 1 Unmodified _TVADKIHSV_ ENSG00000276023|ENST00000617516|DUSP14 43.77239144664712 0.0547478964384323 5 TVADK{I|L}H[VS] 9 0 + 75.1 0.0 0.0 7.754 7.754 97.976 0.0 0.0 0.0 56.37645886452839 11.405979739538672 11.405979739538672 75.10009633901186 0 0.5669015600442578 2.0 1.089136830878453 0.0 + + TVADK{I|L}H[VS] 7.754 + + 158 + 1 2.855 64148.1 1.0 1049 3753 4803 SUDHL4_400M_050219_1,4804 SUDHL4_400M_050219_1,4804,TVADKIHSV True True TVADKIHSV 23.76823 485.272174060345 3185409.5 4803.0 ENSG00000276023|ENST00000617516|DUSP14 7.8229169845581055 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4805 23.782 800.0 132020.0 25 0 9699.1 + -1 ALAPSPAAA 9 106 768.6721554904234 2302.99463707147 3 768.6710693240166 MULTI CID FTMS 0 0 0 4803 96552.671875 0.9080204366538744 -5 0.1261234283447265 2 ENSG00000146278|ENST00000336032|PNRC1 5 TVGGDE 6 -1 47.752 0.0 0.0 2.0735 0.0 0.0 1726.7583947698097 0.0 1726.7583947698097 0.0 13.17532531436136 0.0 0.0 0 1.4291746928241125 0.0 0.805462187404089 0.0 TVGGDE 2.0735 - 870 1 2.855 82605.5 0.5299999713897705 1050 3753 4803 SUDHL4_400M_050219_1,4805 SUDHL4_400M_050219_1,4805, False False ALAPSPAAA 23.782063 768.671069324017 1252892.125 4803.0 ENSG00000146278|ENST00000336032|PNRC1 2.354274034500122 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4806 23.783 41.0 1493900.0 25 0 171100.0 + 37496 TLGANPYYLP 10 94 554.788519983195 1107.56248703319 2 554.7891723513603 MULTI CID FTMS 0 0 0 4803 1113770.125 0.594738614098508 -8 0.1660060882568359 3 Unmodified _TLGANPYYLP_ REV__ENSG00000198670|ENST00000316300|LPA 21.53697664764585 0.484802182336468 5 TP{M(Oxidation (M))|F}K 4 -1 31.331 0.0 0.0 2.8288 0.0 0.0 0.0 631.3136080377561 631.3136080377561 7.390690719683093 0.0 0.0 0.0 0 0.5924778212679485 1.5228787452803376 0.0 0.0 TP{M(Oxidation (M))|F}K 2.8288 - 147 + 1 2.855 51699.7 1.0 1051 3753 4803 SUDHL4_400M_050219_1,4806 SUDHL4_400M_050219_1,4806,TLGANPYYLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4807 23.797 800.0 50056.0 25 0 14408.0 -1 0 33 1079.4643918106844 3235.3713460322533 3 1079.798388659954 MULTI CID FTMS 0 0 0 4803 68434.78125 0.418806257214057 -5 0.1261234283447265 4 5 G 1 -1 6.9897 0.0 0.0 0.21604 0.0 0.0 1856.6571368962543 1318.6791475885375 3175.336284484792 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21604 - 4 + 1 2.855 47219.0 0.4099999964237213 1052 3753 4803 SUDHL4_400M_050219_1,4807 SUDHL4_400M_050219_1,4807, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4811 23.814 352.0 266780.0 25 0 44346.0 + 35489 STMSTNGIPR 10 95 532.2620151742042 1062.5094774152085 2 532.2627441287041 MULTI CID FTMS 0 0 0 4810 197584.4375 0.436213362611531 -9 0.1819400787353515 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 61.60191391372663 0.0323840705564037 5 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP 10 2 + 56.572 0.0 0.0 5.3244 5.3244 81.499 0.0 0.0 0.0 7.269987279362624 2.552725051033065 2.552725051033065 2.552725051033065 0 1.2302046884880935 0.0 0.3807196863200844 0.3807196863200844 {[MG]|[TS]}MSTN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}MSTGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}MS{[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}RP;{[MG]|[TS]}MSTN{[QV]|[N{I|L}]|[RA]|[KV]}VP;{[MG]|[TS]}MS{[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}PR;{[MG]|[TS]}MST{I|L}{NN|[MP]|[D{I|L}]|[EV]}VP;{[MG]|[TS]}M[WK]{[SA]|[TG]}RP;{[MG]|[TS]}MS{[QV]|[N{I|L}]|[RA]|[KV]}[WK]P 5.3244;5.0841;4.4618;4.2216;4.0087;3.8591;3.7684;3.1268;3.0356;3.0356 -;+;-;-;-;-;-;-;-;- + 335 + 1 2.855 78606.1 1.0 1053 3756 4810 SUDHL4_400M_050219_1,4811 SUDHL4_400M_050219_1,4811,STMSTNGIPR True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4812 23.819 313.0 273020.0 25 0 59263.0 + 40576 VKLTLYKY 8 82 514.3144964145342 1026.6144398958684 2 514.3073608279228 MULTI CID FTMS 0 0 0 4810 243188.734375 0.2759903025827128 -9 0.1819400787353515 2 Unmodified _VKLTLYKY_ REV__ENSG00000197646|ENST00000397747|PDCD1LG2;REV__nc|ENSG00000197646|Q9BQ51-2|PDCD1LG2;REV__nc|ENSG00000197646|Q9BQ51-3|PDCD1LG2 11.640296217721598 0.738950129755968 5 KV{I|L} 3 -1 29.693 0.0 0.0 2.8923 0.0 0.0 0.0 683.3483980768186 683.3483980768186 18.098943791441968 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 KV{I|L} 2.8923 - 60 + 1 2.855 76790.9 1.0 1054 3756 4810 SUDHL4_400M_050219_1,4812 SUDHL4_400M_050219_1,4812,VKLTLYKY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4813 23.833 800.0 144800.0 25 0 14693.0 + 7686 EKQKLCYVS 9 129 549.2882648964375 0 549.2881957888603 PEAK CID FTMS 0 0 0 4810 96543.9765625 0.5915790186214637 -2 0.0077953338623046 3 Unmodified _EKQKLCYVS_ ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14 20.453626601364224 0.1969592619112565 5 VSSGD 5 9 27.172 0.0 0.0 2.4779 0.0 0.0 566.2854470233938 82.06684290103749 648.3522899244313 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4749073637206092 0.0 VSSGD 2.4779 - 145 + 1 2.855 91913.6 0.6100000143051147 1055 3756 4810 SUDHL4_400M_050219_1,4813 SUDHL4_400M_050219_1,4813,EKQKLCYVS False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4815 23.848 752.0 193590.0 25 0 53958.0 45245 YSALNSSK 8 104 435.22137623490494 0 435.2210876345634 PEAK CID FTMS 0 0 0 4814 82218.8984375 0.6994443667580825 -5 0.0751514434814453 1 Unmodified _YSALNSSK_ ENSG00000117676|ENST00000374168|RPS6KA1;nc|ENSG00000117676|Q15418-2|RPS6KA1;nc|ENSG00000117676|Q15418-3|RPS6KA1;nc|ENSG00000117676|Q15418-4|RPS6KA1 4.75600775471527 0.5825752635465162 5 K 1 7 2.7642 0.0 0.0 0.3183 0.0 0.0 530.3854576926631 206.9202669733032 737.3057246659662 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.3183 + + 9 + 1 2.855 119332.0 1.0 1056 3757 4814 SUDHL4_400M_050219_1,4815 SUDHL4_400M_050219_1,4815,YSALNSSK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4818 23.871 800.0 70485.0 25 0 8054.4 + 8574 ETPCLIVVYYD 11 87 657.8204517866487 1313.6263506400974 2 657.8202392458916 MULTI CID FTMS 0 0 0 4817 106487.5703125 1.0 0 0.0 1 Unmodified _ETPCLIVVYYD_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__ENSG00000162687|ENST00000294725|KCNT2;REV__ENST00000498426.5_1_1:196286396-196434478:-|nuORF;REV__ENST00000610076.1_1_1:196227273-196577439:-|nuORF;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1;REV__nc|ENSG00000162687|Q6UVM3-2|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-3|KCNT2;REV__nc|ENSG00000162687|Q6UVM3-4|KCNT2 5.731851221503515 0.8481046878870278 5 VTTT 4 -1 18.462 0.0 0.0 1.4054 0.0 0.0 442.1782300685181 466.2128389947876 908.3910690633056 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 VTTT 1.4054 - 126 + 1 2.855 48836.0 0.8700000047683716 1057 3759 4817 SUDHL4_400M_050219_1,4818 SUDHL4_400M_050219_1,4818,ETPCLIVVYYD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4820 23.885 543.0 189920.0 25 0 12107.0 + 40922 VLSPSHTSM 9 126 479.7373891353324 957.4602253374647 2 479.7359191775322 MULTI CID FTMS 0 0 0 4819 83818.1015625 0.4613113041234897 -1 0.0183677673339843 1 Unmodified _VLSPSHTSM_ ENST00000409470.5_2_2:85843553-85850780:+|nuORF;ENST00000455732.5_1_2:85843288-85850811:+|nuORF 25.399314129420983 0.2080152500878129 5 [{I|L}V]SP 4 5 44.565 0.0 0.0 4.6545 0.0 0.0 0.0 558.2001436822874 558.2001436822874 33.30579643347658 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3807196863200844 0.0 + [{I|L}V]SP 4.6545 + + 426 + 1 2.855 87074.2 1.0 1058 3760 4819 SUDHL4_400M_050219_1,4820 SUDHL4_400M_050219_1,4820,VLSPSHTSM False True VLSPSHTSM 23.884815 479.735919177532 857804.5 4819.0 ENST00000409470.5_2_2:85843553-85850780:+|nuORF;;ENST00000455732.5_1_2:85843288-85850811:+|nuORF 4.596389611562093 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4822 23.903 800.0 178180.0 25 0 20625.0 + 18096 KTKEIEQVY 9 134 569.3098299173492 1136.6051069014984 2 569.3112060427666 MULTI CID FTMS 0 0 0 4821 176838.046875 0.2438001925131496 -3 0.036325454711914 1 Unmodified _KTKEIEQVY_ ENSG00000134283|ENST00000358314|PPHLN1;nc|ENSG00000134283|Q8NEY8-2|PPHLN1;nc|ENSG00000134283|Q8NEY8-3|PPHLN1;nc|ENSG00000134283|Q8NEY8-6|PPHLN1;nc|ENSG00000134283|Q8NEY8-9|PPHLN1;nc|ENSG00000134283|Q8NEY8|PPHLN1 63.960520009940105 0.0238892913700936 5 [KT]KE{I|L}EQVY 9 0 + 49.724 0.0 0.0 4.3748 4.3748 85.172 0.0 0.0 0.0 3.1234684152074976 31.1745234050594 3.1234684152074976 9.208187539523747 0 1.0 0.0 1.3441876774005248 0.7742275032520141 + + [KT]KE{I|L}EQVY;[KT]KE{I|L}E[AG]VY;[KP]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}EQVY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[{I|L}V][C(Carbamidomethyl (C))K]VY;{[QN]|[E{I|L}]|[KN]}N[{I|L}V][C(Carbamidomethyl (C))K]VY;{[QV]|[N{I|L}]|[RA]|[KV]}E[{I|L}V][C(Carbamidomethyl (C))K]VY;[KP]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}E[AG]VY;[KT]KE{I|L}VEQY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VV[C(Carbamidomethyl (C))K]VY;{[QN]|[E{I|L}]|[KN]}QVV[C(Carbamidomethyl (C))K]VY 4.3748;3.5646;3.3751;2.7859;2.737;2.7037;2.5649;2.2678;2.2058;2.1568 +;-;-;-;-;-;-;-;-;- + 1595 1 2.855 110979.6 0.800000011920929 1059 3761 4821 SUDHL4_400M_050219_1,4822 SUDHL4_400M_050219_1,4822,KTKEIEQVY True True KTKEIEQVY 23.903138 569.311206042767 4428241.375 4821.0 nc|ENSG00000134283|Q8NEY8-9|PPHLN1;;ENSG00000134283|ENST00000358314|PPHLN1;;nc|ENSG00000134283|Q8NEY8-3|PPHLN1;;nc|ENSG00000134283|Q8NEY8-2|PPHLN1;;nc|ENSG00000134283|Q8NEY8|PPHLN1;;nc|ENSG00000134283|Q8NEY8-6|PPHLN1 5.0054043134053545 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4823 23.917 800.0 92666.0 25 0 34764.0 + 20345 LLFSFTELPL 10 79 590.3362578843956 0 590.3352538943291 PEAK CID FTMS 0 0 0 4821 78190.2421875 0.9218144038580744 -1 0.0140876770019531 2 Unmodified _LLFSFTELPL_ REV__ENSG00000174948|ENST00000389740|GPR149 3.944395688203298 0.3961065659209837 5 W 1 -1 6.9897 0.0 0.0 0.59302 0.0 0.0 589.3281916633425 400.2258700006469 989.5540616639894 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.59302 - 2 + 1 2.855 61517.1 0.5799999833106995 1060 3761 4821 SUDHL4_400M_050219_1,4823 SUDHL4_400M_050219_1,4823,LLFSFTELPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4825 23.93 499.0 195290.0 25 0 11664.0 -1 VGCIPLTI 8 130 436.75045331597255 871.4863536987451 2 436.7503539919853 MULTI CID FTMS 0 0 0 4824 169303.671875 0.4262762162134091 -3 0.0645656585693359 1 Carbamidomethyl (C) _VGC(Carbamidomethyl (C))IPLTI_ ENSG00000172209|ENST00000304402|GPR22 28.17323086031832 0.4514957916281387 5 [RV]NVGNT{I|L} 8 -1 + 47.682 0.0 0.0 5.4713 5.4713 86.422 0.0 0.0 0.0 4.494332193581414 36.755403037991925 4.494332193581414 7.589130598545672 0 0.9247425010840048 0.0 0.4247425010840047 0.3252574989159953 [RV]NVGNT{I|L};{[NV]|[RG]}RVGNT{I|L};[RV]GGVGNT{I|L};[RV]NVGGGT{I|L};{[NV]|[RG]}RVGGGT{I|L};[RV]GGVGGGT{I|L};[RV]N{[QN]|[E{I|L}]|[KN]}E{I|L};[KG][H{I|L}]{[CT]|[{M(Oxidation (M))|F}G]}T{I|L};{[NV]|[RG]}R{[QN]|[E{I|L}]|[KN]}E{I|L};[RV]GG{[QN]|[E{I|L}]|[KN]}E{I|L} 5.4713;4.6005;4.4085;4.4085;3.5377;3.3519;2.558;2.2647;1.6872;1.4874 -;-;-;-;-;-;-;-;-;- 350 1 2.855 79448.6 1.0 1061 3762 4824 SUDHL4_400M_050219_1,4825 SUDHL4_400M_050219_1,4825,VGCIPLTI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4826 23.944 800.0 56068.0 25 0 5181.8 -1 0 62 694.3143383114868 2079.9211855346603 3 694.9817993044853 MULTI CID FTMS 0 0 0 4824 100008.8671875 0.3702045268066201 -5 0.0835247039794921 2 5 GE 2 -1 11.198 0.0 0.0 0.53838 0.0 0.0 359.15881118510816 1531.6775847286217 1890.8363959137296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 GE 0.53838 - 24 + 1 2.855 40984.2 0.6499999761581421 1062 3762 4824 SUDHL4_400M_050219_1,4826 SUDHL4_400M_050219_1,4826, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4828 23.953 401.0 236930.0 25 0 19538.0 + 27620 PLFLIIKGLI 10 115 376.25861071203553 0 376.5515930056572 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _PLFLIIKGLI_ REV__ENSG00000157214|ENST00000394621|STEAP2 0.776531954647913 0.3961065659209837 5 QM 2 -1 5.0886 0.0 0.0 0.67803 0.0 0.0 115.19909290668984 373.1784456842407 488.3775385909305 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QM 0.67803 - 24 + 1 2.855 80441.2 1.0 1063 3763 4827 SUDHL4_400M_050219_1,4828 SUDHL4_400M_050219_1,4828,PLFLIIKGLI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4829 23.956 138.0 557690.0 25 0 92539.0 + 14577 IIAPPERKY 9 77 362.8812679661222 1085.6219744985667 3 362.8811523318291 MULTI CID FTMS 0 0 0 4827 384823.15625 0.0879458489680354 -5 0.0954570770263671 2 Unmodified _IIAPPERKY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2 21.53697664764585 0.2571576504437394 5 {I|L}{I|L}APPEC 7 3 48.738 0.0 0.0 4.4894 0.0 0.0 0.0 359.2359713190063 359.2359713190063 41.7482420802305 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}APPEC 4.4894 - 55 + 1 2.855 69468.6 1.0 1064 3763 4827 SUDHL4_400M_050219_1,4829 SUDHL4_400M_050219_1,4829,IIAPPERKY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4831 23.971 593.0 167280.0 25 0 14506.0 + -1 SNVGPCKKMFL 11 104 620.3133614553385 1238.612169977477 2 620.3123657107353 MULTI CID FTMS 0 0 0 4830 325853.03125 1.0 0 0.0 1 Oxidation (M) _SNVGPCKKM(Oxidation (M))FL_ REV__ENSG00000111199|ENST00000261740|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-2|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-3|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-4|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-5|TRPV4;REV__nc|ENSG00000111199|Q9HBA0-6|TRPV4 15.248480904072842 0.7179608125786238 5 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP[QP]N 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 67.063 11.605 2.9291 5.4143 5.4143 60.621 0.0 0.0 0.0 0.0 40.58989609511226 0.0 0.0 0 2.6549471895720984 0.0 0.0 1.3169015600442575 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP[QP]N 5.4143 - 1972 + 1 2.855 75812.2 1.0 1065 3764 4830 SUDHL4_400M_050219_1,4831 SUDHL4_400M_050219_1,4831,SNVGPCKKMFL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4832 23.984 800.0 133470.0 25 0 8070.7 -1 0 92 694.3143383114868 2079.9211855346603 3 694.3145629763603 MULTI CID FTMS 0 0 0 4830 126933.296875 0.2124152454978191 -4 0.085000991821289 2 5 {[CT]|[{M(Oxidation (M))|F}G]}RGTWGH{[CA]|SS}[WQ]W{M(Oxidation (M))|F}PS{[SA]|[TG]} 18 -1 + 69.056 0.0 0.0 3.3201 3.3201 79.532 0.0 0.0 0.0 43.05761290041247 2.9440873258899813 2.9440873258899813 6.255410871774849 0 0.4247425010840047 0.0 1.6549471895720984 0.0 {[CT]|[{M(Oxidation (M))|F}G]}RGTWGH{[CA]|SS}[WQ]W{M(Oxidation (M))|F}PS{[SA]|[TG]};{[CT]|[{M(Oxidation (M))|F}G]}RGTWGH{[CA]|SS}{[ES]|[DT]|[{I|L}C]}QR{M(Oxidation (M))|F}PS{[SA]|[TG]} 3.3201;3.0194 -;- 1008 + 1 2.855 83522.3 0.8999999761581421 1066 3764 4830 SUDHL4_400M_050219_1,4832 SUDHL4_400M_050219_1,4832, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4834 24.003 800.0 210740.0 25 0 9997.3 + 29873 QQYPGQQGY 9 178 534.7397578725339 1067.4649628118675 2 534.7402221560478 MULTI CID FTMS 0 0 0 4833 149481.28125 1.0 0 0.0 1 Unmodified _QQYPGQQGY_ ENSG00000141380|ENST00000415083|SS18;ENST00000580958.5_1_18:23598320-23615185:-|nuORF;nc|ENSG00000141380|Q15532-2|SS18 42.09456458481378 0.0639583784996157 5 [AG]QYH 5 7 23.893 0.0 0.0 2.2383 0.0 0.0 0.0 508.2127404820428 508.2127404820428 8.354605691132058 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.6989700043360187 [AG]QYH 2.2383 - 1275 1 2.83 128256.6 0.9900000095367432 1067 3765 4833 SUDHL4_400M_050219_1,4834 SUDHL4_400M_050219_1,4834,QQYPGQQGY True True QQYPGQQGY 24.00271 534.740222156048 914917.875 4833.0 ENSG00000141380|ENST00000415083|SS18;;ENST00000580958.5_1_18:23598320-23615185:-|nuORF;;nc|ENSG00000141380|Q15532-2|SS18 7.037494818369548 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4836 24.016 507.0 494610.0 25 0 40065.0 + 14579 IIAPPERKY 9 102 543.8180369052303 1085.6215208772603 2 543.8187744021416 MULTI CID FTMS 0 0 0 4835 404485.375 0.3679433983439447 -2 0.0468864440917968 1 Unmodified _IIAPPERKY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2 45.69961567697781 0.0497987121815769 5 {I|L}{I|L}APPE[RK]Y 9 0 + 84.123 0.0 0.0 7.7488 7.7488 97.985 0.0 0.0 0.0 71.41949716988933 6.655914784354238 6.655914784354238 84.12253473109317 0 0.9247425010840048 2.0 0.4247425010840047 0.805462187404089 + + {I|L}{I|L}APPE[RK]Y 7.7488 + + 242 + 1 2.83 189151.1 1.0 1068 3766 4835 SUDHL4_400M_050219_1,4836 SUDHL4_400M_050219_1,4836,IIAPPERKY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4837 24.03 800.0 227990.0 25 0 21324.0 + 30427 RCVKELQVY 9 195 379.8747868781037 1136.6025312345112 3 379.8755981326103 MULTI CID FTMS 0 0 0 4835 181650.40625 0.8456411564227515 1 -0.0271530151367187 2 Unmodified _RCVKELQVY_ REV__ENSG00000141934|ENST00000434325|PLPP2;REV__nc|ENSG00000141934|O43688-2|PLPP2;REV__nc|ENSG00000141934|O43688-3|PLPP2 24.99096001346401 0.2132109383330889 5 W[KS]{I|L}EQ[YV] 8 -1 26.763 0.0 0.0 2.3546 0.0 0.0 85.08989913154453 0.0 85.08989913154453 0.0 2.325703356767264 0.0 0.0 0 0.3807196863200844 0.0 1.5356668758921828 0.75 W[KS]{I|L}EQ[YV] 2.3546 - 478 1 2.83 146273.1 0.8999999761581421 1069 3766 4835 SUDHL4_400M_050219_1,4837 SUDHL4_400M_050219_1,4837,RCVKELQVY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4839 24.036 48.0 907950.0 25 0 70335.0 + 40194 VGPTTGRPQL 10 67 513.2897834805876 1024.5650140279752 2 513.2898437380791 MULTI CID FTMS 0 0 0 4838 747234.125 0.5591079335996121 -1 0.0271530151367187 1 Unmodified _VGPTTGRPQL_ REV__ENST00000576886.5_1_16:2834849-2835800:-|nuORF 12.240655878213236 0.6421556946785427 5 [VG]PTG 5 -1 51.07 0.0 0.0 4.9846 0.0 0.0 0.0 610.3309420221311 610.3309420221311 39.65002299493948 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.3494850021680094 0.0 [VG]PTG 4.9846 - 60 + 1 2.83 39735.0 1.0 1070 3767 4838 SUDHL4_400M_050219_1,4839 SUDHL4_400M_050219_1,4839,VGPTTGRPQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4840 24.048 736.0 164880.0 25 0 19874.0 + 16850 KIDEKTAEL 9 145 523.7891269897823 1045.5637010463645 2 523.7894775271416 MULTI CID FTMS 0 0 0 4838 177598.890625 0.8109063388909654 2 -0.0783271789550781 2 Unmodified _KIDEKTAEL_ ENSG00000143228|ENST00000271452|NUF2 46.0223103267499 0.0490911897871712 5 {I|L}K{M(Oxidation (M))|F}ATEVE 8 7 65.805 0.0 0.0 6.2938 0.0 0.0 0.0 125.07242761783438 125.07242761783438 39.25281266474045 0.0 0.0 0.0 0 1.41944517631652 0.6575773191777937 0.9731975075880328 0.0 {I|L}K{M(Oxidation (M))|F}ATEVE 6.2938 - 5018 + 1 2.83 95954.2 1.0 1071 3767 4838 SUDHL4_400M_050219_1,4840 SUDHL4_400M_050219_1,4840,KIDEKTAEL True True KIDEKTAEL 24.04832 523.789477527142 866547.6875 4838.0 ENSG00000143228|ENST00000271452|NUF2 3.934131940205892 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4841 24.062 800.0 300970.0 25 0 18710.0 14155 IDAHAGGL 8 222 377.1967928331389 752.3790327330778 2 377.1973754763603 MULTI CID FTMS 0 0 0 4838 112750.578125 0.392025803597166 -1 0.0271530151367187 3 Unmodified _IDAHAGGL_ ENSG00000172456|ENST00000303721|FGGY;ENST00000495718.5_1_1:59787394-60091722:+|nuORF;nc|ENSG00000172456|Q96C11-2|FGGY;nc|ENSG00000172456|Q96C11-3|FGGY;nc|ENSG00000172456|Q96C11-4|FGGY;nc|ENSG00000172456|Q96C11-5|FGGY 20.871210003555333 0.6025813472596342 5 [AG]HE{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 7 5 + 32.718 0.0 0.0 4.3487 4.3487 76.382 0.0 0.0 0.0 0.8928177157550437 6.777807052660808 0.8928177157550437 0.8928177157550437 0 0.4417509724019616 1.3010299956639813 0.75 0.0 [AG]HE{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[YC]|[HE]}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[HQ]E{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}[RH]NV;{[YC]|[HE]}[AG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}[Y{I|L}]MV;{NN|[MP]|[D{I|L}]|[EV]}[RH]GGV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[{I|L}V]{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[Y{I|L}]VM;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{I|L} 4.3487;4.23;3.246;3.2182;2.9779;1.9819;1.9661;1.8906;1.4928;1.3054 -;-;-;-;-;-;-;-;-;- 214 1 2.83 185866.3 0.7900000214576721 1072 3767 4838 SUDHL4_400M_050219_1,4841 SUDHL4_400M_050219_1,4841,IDAHAGGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4843 24.07 230.0 257290.0 25 0 40783.0 + 35490 STMSTNGIPR 10 74 532.2620151742042 1062.5094774152085 2 532.2620727419853 MULTI CID FTMS 0 0 0 4842 373568.4375 0.8247387615606646 3 -0.171304702758789 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 41.95555342248728 0.1369168616057562 5 {[MG]|[TS]}MSTNG{I|L}RP 10 2 + 57.374 0.0 0.0 5.3998 5.3998 87.645 0.0 0.0 0.0 53.87903443073903 11.760912590556812 11.760912590556812 9.164539485499256 0 0.5 0.0 0.3807196863200844 0.3494850021680094 {[MG]|[TS]}MSTNG{I|L}RP;{[MG]|[TS]}MSTGGG{I|L}RP;{[MG]|[TS]}M{[{M(Oxidation (M))|F}H]|[RQ]}[K{I|L}]CP;{[MG]|[TS]}M{[{M(Oxidation (M))|F}H]|[RQ]}[W{I|L}]AA 5.3998;4.5373;0.95437;0.59978 -;-;-;- 133 + 1 2.786 51765.1 1.0 1073 3768 4842 SUDHL4_400M_050219_1,4843 SUDHL4_400M_050219_1,4843,STMSTNGIPR False True STMSTNGIPR 24.069682 532.262072741985 399689040.0 4842.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 9.209195295969645 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4844 24.072 107.0 508310.0 25 0 84742.0 -1 MVIGIPVY 8 75 454.2532230952268 906.4918932572537 2 454.2533447146416 MULTI CID FTMS 0 0 0 4842 240340.90625 0.2569682968670814 -2 0.0594482421875 2 Oxidation (M) _M(Oxidation (M))VIGIPVY_ ENSG00000116514|ENST00000235150|RNF19B;nc|ENSG00000116514|Q6ZMZ0-2|RNF19B;nc|ENSG00000116514|Q6ZMZ0-3|RNF19B;nc|ENSG00000116514|Q6ZMZ0|RNF19B 11.114462752807354 0.7467182956244686 5 AVY 3 -1 33.188 0.0 0.0 3.6611 0.0 0.0 555.3130970685562 0.0 555.3130970685562 0.0 26.197887582883936 0.0 0.0 0 1.0 0.0 0.0 0.0 AVY 3.6611 - 10 1 2.786 48249.0 1.0 1074 3768 4842 SUDHL4_400M_050219_1,4844 SUDHL4_400M_050219_1,4844,MVIGIPVY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4845 24.083 604.0 222670.0 25 0 12420.0 + 12174 GQPREPQVY 9 129 537.2720577065379 1072.5295624798755 2 537.2712280154228 MULTI CID FTMS 0 0 0 4842 306326.3125 0.1209870209811311 -4 0.1063346862792968 3 Unmodified _GQPREPQVY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 41.95555342248728 0.0647214845423414 5 [AG]G[RP]EPQVY 10 2 + 56.319 0.0 0.0 5.2511 5.2511 79.549 0.0 0.0 0.0 1.1988266424910137 15.026975159433531 1.1988266424910137 1.1988266424910137 0 1.589136830878453 1.0457574905606752 0.0 0.3807196863200844 [AG]G[RP]EPQVY;{[QG]|[NA]}[RP]EPQVY;[AG]GV[WP]PQVY;{[QG]|[NA]}V[WP]PQVY;[AG]G[RP]EP[AG]VY;[AG]G{[HG]|PP}{[RE]|[WV]}QVY;{[QG]|[NA]}[RP]EP[AG]VY;{[QG]|[NA]}{[HG]|PP}{[RE]|[WV]}QVY;[AG]P{[NV]|[RG]}EPQVY;[RP]E[QP]GQVY 5.2511;5.1393;4.7438;4.632;4.3966;4.348;4.2808;4.2362;4.1332;3.9175 -;+;-;-;-;-;-;-;-;- + 475 1 2.786 111814.1 1.0 1075 3768 4842 SUDHL4_400M_050219_1,4845 SUDHL4_400M_050219_1,4845,GQPREPQVY True True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 4846 24.094 687.0 277960.0 25 0 47292.0 + 31094 RLLEGVKQA 9 138 507.3078748514347 1012.6011967696694 2 507.3071472048759 MULTI CID FTMS 0 0 0 4842 238042.421875 1.0 0 0.0 4 Unmodified _RLLEGVKQA_ ENSG00000116221|ENST00000360840|MRPL37 36.506200033944 0.094635877243972 5 [{I|L}V]{[RE]|[WV]}AVKQA 9 3 + 52.848 0.0 0.0 5.219 5.219 86.686 0.0 0.0 0.0 4.858508655245622 39.74919937492872 4.858508655245622 9.128498242810998 0 1.0994850021680094 0.958607314841775 0.4247425010840047 0.9559771852360796 [{I|L}V]{[RE]|[WV]}AVKQA;[{I|L}V][W{I|L}]GVKQA;[{I|L}V]{[RE]|[WV]}AVK[AG]A;[{I|L}V]{[SA]|[TG]}[TP]VKQA;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}[TP]VKQA;[{I|L}V][W{I|L}]GVK[AG]A;[{I|L}V][W{I|L}]K[VG]QA 5.219;4.3176;4.3097;3.9354;3.7709;3.4082;1.7252 -;-;-;-;-;-;- 235 1 2.786 149487.9 1.0 1076 3768 4842 SUDHL4_400M_050219_1,4846 SUDHL4_400M_050219_1,4846,RLLEGVKQA True True RLLEGVKQA 24.094437 507.307147204876 1452312.25 4842.0 ENSG00000116221|ENST00000360840|MRPL37 2.3425981998443604 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4847 24.108 785.0 184450.0 25 0 15444.0 + 28863 QAKINDAY 8 144 461.7338133796821 0 461.7334777712822 PEAK CID FTMS 0 0 0 4842 190072.71875 1.0 0 0.0 5 Unmodified _QAKINDAY_ REV__ENSG00000169228|ENST00000303251|RAB24 14.581692164780916 0.4900557725783909 5 A 1 -1 5.4846 0.0 0.0 0.59521 0.0 0.0 669.3417858298648 178.0513857477172 847.3931715775819 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.59521 + + 20 + 1 2.786 111795.9 1.0 1077 3768 4842 SUDHL4_400M_050219_1,4847 SUDHL4_400M_050219_1,4847,QAKINDAY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4849 24.124 800.0 125280.0 25 0 13315.0 + 33792 SLDAPHSTY 9 133 495.7289339773368 0 495.7289001345634 PEAK CID FTMS 0 0 0 4848 61382.37890625 0.3960422562984622 2 -0.1252727508544922 1 Unmodified _SLDAPHSTY_ ENSG00000076944|ENST00000221283|STXBP2;nc|ENSG00000076944|Q15833-2|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2 32.30548876998284 0.0995446103270859 5 DAP 3 6 19.425 0.0 0.0 1.9632 0.0 0.0 200.11174698279177 503.1871854258745 703.2989324086662 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + DAP 1.9632 + + 227 + 1 2.786 81076.3 0.8700000047683716 1078 3769 4848 SUDHL4_400M_050219_1,4849 SUDHL4_400M_050219_1,4849,SLDAPHSTY True True SLDAPHSTY 24.123857 495.728900134563 458517.375 4848.0 nc|ENSG00000076944|Q15833-2|STXBP2;;ENSG00000076944|ENST00000221283|STXBP2;;nc|ENSG00000076944|Q15833-3|STXBP2 6.316559791564941 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4850 24.126 115.0 758910.0 25 0 189690.0 + 13242 HIASAKAI 8 79 405.7444317574299 809.4743105816598 2 405.7443725466728 MULTI CID FTMS 0 0 0 4848 359565.65625 0.6221554051182404 1 -0.0795097351074218 2 Unmodified _HIASAKAI_ REV__ENSG00000122375|ENST00000241891|OPN4;REV__nc|ENSG00000122375|Q9UHM6-2|OPN4 18.13498045792455 0.6430038125133779 5 QA{I|L} 3 -1 29.425 0.0 0.0 3.635 0.0 0.0 479.2891432006035 0.0 479.2891432006035 0.0 17.830918867322296 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 QA{I|L} 3.635 - 46 + 1 2.786 72802.4 1.0 1079 3769 4848 SUDHL4_400M_050219_1,4850 SUDHL4_400M_050219_1,4850,HIASAKAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4851 24.14 767.0 222850.0 25 0 36723.0 + 17686 KPTGARPSAL 10 126 499.2924988470468 0 499.2920715212822 PEAK CID FTMS 0 0 0 4848 232099.359375 1.0 0 0.0 3 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 27.22323531849824 0.2400927426089275 5 PTG 3 7 36.995 0.0 0.0 3.7122 0.0 0.0 128.0939759223599 610.3300264947874 738.4240024171472 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.805462187404089 0.0 + PTG 3.7122 + + 95 + 1 2.786 130563.0 1.0 1080 3769 4848 SUDHL4_400M_050219_1,4851 SUDHL4_400M_050219_1,4851,KPTGARPSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4852 24.153 800.0 326750.0 25 0 96527.0 + 40972 VLYDRQGIGR 10 111 588.8276200878288 0 588.8270751833916 PEAK CID FTMS 0 0 0 4848 139635.828125 0.32543713021086 -1 0.0460319519042968 4 Unmodified _VLYDRQGIGR_ ENSG00000168090|ENST00000303904|COPS6 81.9152076656658 0.0002202600180334 5 {I|L}{[YD]|[{M(Oxidation (M))|F}M]}RQVAG 8 4 43.216 0.0 0.0 3.676 0.0 0.0 99.06669369944969 171.08887659244377 270.15557029189347 0.0 0.0 0.0 0.0 0 2.004432191740108 0.0 0.0 1.75 {I|L}{[YD]|[{M(Oxidation (M))|F}M]}RQVAG 3.676 - 807 + 1 2.786 198259.4 0.8399999737739563 1081 3769 4848 SUDHL4_400M_050219_1,4852 SUDHL4_400M_050219_1,4852,VLYDRQGIGR True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4853 24.167 800.0 158720.0 25 0 17561.0 + 3436 CCERGPPL 8 151 437.6980150019477 0 437.6970703005791 PEAK CID FTMS 0 0 0 4848 116064.109375 0.9876621723652684 1 -0.0795097351074218 5 Unmodified _CCERGPPL_ REV__ENST00000262304.8_1_16:2143686-2144130:-|nuORF 15.847184025352805 0.4758297917908462 5 PPS 3 -1 21.788 0.0 0.0 2.4947 0.0 0.0 131.0928283625986 458.1283663385376 589.2211947011361 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 PPS 2.4947 - 34 + 1 2.786 101707.5 0.7099999785423279 1082 3769 4848 SUDHL4_400M_050219_1,4853 SUDHL4_400M_050219_1,4853,CCERGPPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4854 24.174 353.0 352690.0 25 0 16460.0 -1 0 184 358.2099065383737 357.2026300717737 1 358.2060119509697 MULTI CID FTMS 0 0 0 4848 229691.65625 1.0 0 0.0 6 5 Y 1 -1 10.837 0.0 0.0 3.034 0.0 0.0 176.1284703811471 0.0 176.1284703811471 0.0 0.5598687972196625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.034 - 15 + 1 2.786 100125.4 1.0 1083 3769 4848 SUDHL4_400M_050219_1,4854 SUDHL4_400M_050219_1,4854, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4855 24.187 800.0 146610.0 25 0 13990.0 39739 VEKLRDMK 8 136 509.7883591597653 0 509.7881652712822 PEAK CID FTMS 0 0 0 4848 156981.046875 1.0 0 0.0 7 Unmodified _VEKLRDMK_ ENSG00000111249|ENST00000261726|CUX2 20.453626601364224 0.4093984001168845 5 MT 2 7 20.322 0.0 0.0 1.9972 0.0 0.0 146.10655122793065 636.3482149713499 782.4547661992806 0.0 0.0 0.0 0.0 0 0.9436726795685344 0.0 0.3807196863200844 0.0 MT 1.9972 - 84 + 1 2.786 91883.8 0.8700000047683716 1084 3769 4848 SUDHL4_400M_050219_1,4855 SUDHL4_400M_050219_1,4855,VEKLRDMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4857 24.205 800.0 111810.0 25 0 24747.0 + 29027 QEEKIKTVY 9 118 569.3098299173492 1136.6051069014984 2 569.3109619021416 MULTI CID FTMS 0 0 0 4856 31282.2109375 0.043127648057493 6 -0.1764354705810547 1 Unmodified _QEEKIKTVY_ REV__ENSG00000138778|ENST00000265148|CENPE;REV__nc|ENSG00000138778|Q02224-3|CENPE 25.399314129420983 0.2080152500878129 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[{I|L}V][C(Carbamidomethyl (C))K]VY 9 -1 + 37.13 0.0 0.0 3.2668 3.2668 83.448 0.0 0.0 0.0 7.666434000304328 22.503859178250785 7.666434000304328 9.476212463643424 0 1.0 0.0 0.8494850021680094 0.805462187404089 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[{I|L}V][C(Carbamidomethyl (C))K]VY;{[QN]|[E{I|L}]|[KN]}N[{I|L}V][C(Carbamidomethyl (C))K]VY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[{I|L}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KY;{[CP]|[EA]}GV[{I|L}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KY;{[QN]|[E{I|L}]|[KN]}N[{I|L}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[{I|L}V][WR][HA];{[CP]|[EA]}GV[{I|L}V][WR][HA];{[QN]|[E{I|L}]|[KN]}N[{I|L}V][WR][HA] 3.2668;2.4331;2.0334;1.3546;1.1997;0.99821;0.31941;0.16448 -;-;-;-;-;-;-;- 173 1 2.764 72299.6 0.8600000143051147 1085 3770 4856 SUDHL4_400M_050219_1,4857 SUDHL4_400M_050219_1,4857,QEEKIKTVY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4858 24.206 33.0 2141600.0 25 0 412130.0 + 40971 VLYDRQGIGR 10 68 392.8872161692542 1175.6398191079627 3 392.8868896365166 MULTI CID FTMS 0 0 0 4856 1276758.5 1.0 0 0.0 2 Unmodified _VLYDRQGIGR_ ENSG00000168090|ENST00000303904|COPS6 38.17557092003332 0.1768326257063233 5 V{I|L}{[YD]|[{M(Oxidation (M))|F}M]}RQ{[QV]|[N{I|L}]|[RA]|[KV]}R 9 2 + 60.64 0.0 0.0 5.158 5.158 78.141 0.0 0.0 0.0 43.91827190205533 0.6741000465273572 0.6741000465273572 0.4575749056067479 0 0.3807196863200844 2.0 0.0 0.6989700043360187 V{I|L}{[YD]|[{M(Oxidation (M))|F}M]}RQ{[QV]|[N{I|L}]|[RA]|[KV]}R;V{I|L}{[YD]|[{M(Oxidation (M))|F}M]}RQ{[VA]|[{I|L}G]}GR;V{I|L}{[WT]|[RM]}{M(Oxidation (M))|F}Q{[QV]|[N{I|L}]|[RA]|[KV]}R;V{I|L}{[WT]|[RM]}{M(Oxidation (M))|F}Q{[VA]|[{I|L}G]}GR 5.158;5.1191;4.3909;4.352 -;+;-;- + 87 + 1 2.764 61747.2 1.0 1086 3770 4856 SUDHL4_400M_050219_1,4858 SUDHL4_400M_050219_1,4858,VLYDRQGIGR False True VLYDRQGIGR 24.205888 392.886889636517 6704680.625 4856.0 ENSG00000168090|ENST00000303904|COPS6 8.350918610890707 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4859 24.208 77.0 838670.0 25 0 94482.0 + + 2955 AVIAPKSSY 9 87 468.26333803355385 934.5121231339076 2 468.2628967165947 MULTI CID FTMS 0 0 0 4856 720690.5 0.8380746994652363 -1 0.0795097351074218 3 Unmodified _AVIALQYTG_ ENSG00000198887|ENST00000361138|SMC5 22.736283301280096 0.2418982879461534 5 {[VA]|[{I|L}G]}{I|L}AQA 6 -1 51.387 0.0 0.0 5.4989 0.0 0.0 0.0 378.1774080865844 378.1774080865844 16.786662482156345 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}AQA 5.4989 - 588 + 1 2.764 55084.4 1.0 1087 3770 4856 SUDHL4_400M_050219_1,4859 SUDHL4_400M_050219_1,4859,AVIALQYTG False False AVIAPKSSY 24.207656 468.262896716595 4111649.5 4856.0 ENSG00000198887|ENST00000361138|SMC5 4.437791665395101 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4860 24.21 126.0 492910.0 25 0 92533.0 + 38537 TSSAVTTALK 10 81 489.7764746593751 0 489.7761413455009 PEAK CID FTMS 0 0 0 4856 470169.71875 1.0 0 0.0 4 Unmodified _TSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 28.23362336080872 0.231954783421961 5 SSAVTTA 7 3 35.438 0.0 0.0 3.6252 0.0 0.0 101.04219384824394 256.1668795221313 357.2090733703752 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + SSAVTTA 3.6252 + + 75 + 1 2.764 54426.5 1.0 1088 3770 4856 SUDHL4_400M_050219_1,4860 SUDHL4_400M_050219_1,4860,TSSAVTTALK False True TSSAVTTALK 24.210236 489.776141345501 1789847.125 4856.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 9.54021374384562 2.0 True 10.0 False splicing PXD020620_cell_line SUDHL4_400M_050219_1 4861 24.224 800.0 250190.0 25 0 65324.0 -1 0 58 1176.4980537134957 3526.472331740687 3 1177.162524402142 MULTI CID FTMS 0 0 0 4856 253125.6875 0.1316242143436984 -6 0.2318763732910156 5 5 {M(Oxidation (M))|F}G 2 -1 8.5835 0.0 0.0 0.2434 0.0 0.0 2000.7006775432249 1318.6742337952126 3319.3749113384374 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.2434 - 45 + 1 2.764 164740.3 0.6800000071525574 1089 3770 4856 SUDHL4_400M_050219_1,4861 SUDHL4_400M_050219_1,4861, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4862 24.233 508.0 284550.0 25 0 23263.0 -1 0 153 462.2553392284892 461.2480627618892 1 462.2530395388603 MULTI CID FTMS 0 0 0 4856 141684.671875 1.0 0 0.0 6 5 Y 1 -1 15.485 0.0 0.0 3.3571 0.0 0.0 280.1737047070048 0.0 280.1737047070048 0.0 6.1522446068913705 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.3571 - 35 + 1 2.764 113533.5 1.0 1090 3770 4856 SUDHL4_400M_050219_1,4862 SUDHL4_400M_050219_1,4862, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4864 24.238 39.0 1538700.0 25 0 255750.0 + 14578 IIAPPERKY 9 60 362.8812679661222 1085.6219744985667 3 362.8812438845634 MULTI CID FTMS 0 0 0 4863 993218.25 0.2269858785474176 3 -0.1097526550292968 1 Unmodified _IIAPPERKY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2 16.149105407346934 0.3995459350917656 5 {I|L}{I|L}APPEC 7 3 51.748 0.0 0.0 4.7667 0.0 0.0 0.0 359.2330721490844 359.2330721490844 44.75854203687032 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}APPEC 4.7667 - 36 + 1 2.764 57448.9 1.0 1091 3771 4863 SUDHL4_400M_050219_1,4864 SUDHL4_400M_050219_1,4864,IIAPPERKY False True IIAPPERKY 24.237561 362.881243884563 43120785.0 4863.0 ENSG00000143632|ENST00000366684|ACTA1;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000163017|ENST00000345517|ACTG2;;ENSG00000107796|ENST00000224784|ACTA2;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;ENSG00000159251|ENST00000290378|ACTC1;;ENSG00000169067|ENST00000423391|ACTBL2;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENSG00000075624|ENST00000646664|ACTB 6.040836175282796 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4865 24.245 415.0 90115.0 25 0 6568.0 -1 0 52 694.3143383114868 2079.9211855346603 3 694.3143188357353 MULTI CID FTMS 0 0 0 4863 147643.421875 0.2470723953116907 3 -0.1097526550292968 2 5 WTGPS{[SA]|[TG]} 7 -1 38.645 0.0 0.0 1.858 0.0 0.0 1375.61132197356 0.0 1375.61132197356 0.0 31.65501019262713 0.0 0.0 0 1.3182503180159344 0.0 1.424742501084005 0.0 WTGPS{[SA]|[TG]} 1.858 - 35 1 2.764 39866.5 1.0 1092 3771 4863 SUDHL4_400M_050219_1,4865 SUDHL4_400M_050219_1,4865, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4866 24.259 800.0 177960.0 25 0 17236.0 + 10669 FVQLCPYKGQG 11 121 620.3133614553385 1238.612169977477 2 620.3127319216728 MULTI CID FTMS 0 0 0 4863 140799.15625 0.4320940508359933 7 -0.1462821960449218 3 Unmodified _FVQLCPYKGQG_ REV__ENSG00000171121|ENST00000392685|KCNMB3;REV__KCNMB3|p.I210Sfs*10|1|0.15|ENSG00000171121|chr3:179243116-179243116|T/-|frameshift_variant;REV__nc|ENSG00000171121|Q9NPA1-2|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-4|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1-5|KCNMB3;REV__nc|ENSG00000171121|Q9NPA1|KCNMB3 21.53697664764585 0.586507868110548 5 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PA + + 78.642 13.065 3.2976 6.3492 6.3492 62.98 0.0 0.0 0.0 0.0 59.94714991842429 0.0 0.0 0 2.6237125054200234 0.0 0.0 1.8862430794108045 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPPPQN 6.3492 - 3274 + 1 2.764 106978.5 0.6600000262260437 1093 3771 4863 SUDHL4_400M_050219_1,4866 SUDHL4_400M_050219_1,4866,FVQLCPYKGQG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4868 24.27 480.0 245770.0 25 0 19052.0 + 14580 IIAPPERKY 9 97 543.8180369052303 1085.6215208772603 2 543.8188354372978 MULTI CID FTMS 0 0 0 4867 129151.515625 0.1174837225210765 4 -0.104888916015625 1 Unmodified _IIAPPERKY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2 13.90604991867851 0.4602628045680013 5 {I|L}{I|L}AP 4 5 45.445 0.0 0.0 4.1861 0.0 0.0 0.0 688.3421770908787 688.3421770908787 35.91242101953516 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {I|L}{I|L}AP 4.1861 + + 133 + 1 2.764 95587.0 1.0 1094 3772 4867 SUDHL4_400M_050219_1,4868 SUDHL4_400M_050219_1,4868,IIAPPERKY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4869 24.272 104.0 779420.0 25 0 77384.0 42284 VSQVITVN 8 92 430.2478761550677 858.4811993769355 2 430.2472106814384 MULTI CID FTMS 0 0 0 4867 326029.71875 0.1363910102462773 -7 0.2748317718505859 2 Unmodified _VSQVITVN_ ENST00000429644.6_1_3:81640267-81643094:-|nuORF 30.63653989081413 0.3996269429323407 5 [VS]QV 4 4 31.872 0.0 0.0 3.7126 0.0 0.0 0.0 442.2292211877355 442.2292211877355 21.27580739417347 0.0 0.0 0.0 0 0.9247425010840048 1.3979400086720375 0.5941876774005249 0.0 + [VS]QV 3.7126 + + 219 1 2.764 66258.4 1.0 1095 3772 4867 SUDHL4_400M_050219_1,4869 SUDHL4_400M_050219_1,4869,VSQVITVN False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4870 24.274 114.0 585940.0 25 0 81523.0 + 13335 HLDPAVKEV 9 97 504.2796547205213 1006.5447565078426 2 504.2793151736259 MULTI CID FTMS 0 0 0 4867 167380.203125 1.0 0 0.0 3 Unmodified _HLDPAVKEV_ ENSG00000168438|ENST00000307731|CDC40;ENST00000606893.5_1_6:110501354-110532119:+|nuORF 30.63653989081413 0.1413794767160703 5 [H{I|L}]D 3 6 28.512 0.0 0.0 2.8327 0.0 0.0 0.0 638.3514331037989 638.3514331037989 9.532796692927263 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.3807196863200844 0.0 + [H{I|L}]D 2.8327 + + 177 1 2.764 56842.5 1.0 1096 3772 4867 SUDHL4_400M_050219_1,4870 SUDHL4_400M_050219_1,4870,HLDPAVKEV False True HLDPAVKEV 24.274202 504.279315173626 2427032.25 4867.0 ENSG00000168438|ENST00000307731|CDC40;;ENST00000606893.5_1_6:110501354-110532119:+|nuORF 5.661849021911621 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4871 24.288 800.0 74694.0 25 0 15652.0 -1 0 48 939.1345007320132 3752.508897061653 4 939.3829833865166 MULTI CID FTMS 0 0 0 4867 169062.65625 0.7437094916695335 -2 0.0715465545654296 4 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.18627 0.0 0.0 2203.7663750602087 1398.663563594401 3602.42993865461 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.18627 - 13 + 1 2.764 59974.7 0.6000000238418579 1097 3772 4867 SUDHL4_400M_050219_1,4871 SUDHL4_400M_050219_1,4871, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4872 24.302 800.0 103520.0 25 0 6645.3 -1 0 64 1115.1631723244975 5570.779479289487 5 1115.564135730267 MULTI CID FTMS 0 0 0 4867 127053.8984375 1.0 0 0.0 5 5 GP 2 -1 10.969 0.0 0.0 0.1969 0.0 0.0 1821.879927134354 3591.803794698219 5413.683721832573 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GP 0.1969 - 7 + 1 2.764 57726.8 0.4600000083446502 1098 3772 4867 SUDHL4_400M_050219_1,4872 SUDHL4_400M_050219_1,4872, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4874 24.31 237.0 273190.0 25 0 20103.0 + 40195 VGPTTGRPQL 10 102 513.2897834805876 1024.5650140279752 2 513.2897216677666 MULTI CID FTMS 0 0 0 4873 111416.0390625 0.08336556011824 5 -0.0772571563720703 1 Unmodified _VGPTTGRPQL_ REV__ENST00000576886.5_1_16:2834849-2835800:-|nuORF 26.268140514670165 0.3785003716575977 5 [VG]PTG 5 -1 48.359 0.0 0.0 4.7199 0.0 0.0 0.0 610.3342379205686 610.3342379205686 30.700523801503465 0.0 0.0 0.0 0 1.0044321917401078 1.5228787452803376 0.3252574989159953 0.0 [VG]PTG 4.7199 - 280 + 1 2.757 55503.3 1.0 1099 3773 4873 SUDHL4_400M_050219_1,4874 SUDHL4_400M_050219_1,4874,VGPTTGRPQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4875 24.324 800.0 37995.0 25 0 9621.0 -1 0 31 1183.817836712691 3548.431680738273 3 1184.821215808392 MULTI CID FTMS 0 0 0 4873 56056.91015625 0.5617173307781101 -5 0.2403297424316406 2 5 E 1 -1 4.6041 0.0 0.0 0.12975 0.0 0.0 2892.2056198025293 524.1611422174436 3416.366762019973 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.12975 - 1 + 1 2.757 35116.1 0.3400000035762787 1100 3773 4873 SUDHL4_400M_050219_1,4875 SUDHL4_400M_050219_1,4875, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4876 24.326 77.0 628510.0 25 0 73876.0 + 17070 KLDETGNSL 9 86 488.7507666103254 975.4869802874508 2 488.7498351931572 MULTI CID FTMS 0 0 0 4873 386917.59375 0.2640622853930341 -6 0.2726249694824219 3 Unmodified _KLDETGNSL_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 29.84058131909904 0.1515068451768857 5 [MT][RP]TGNS{I|L} 9 4 + 34.504 0.0 0.0 3.5371 3.5371 73.328 0.0 0.0 0.0 0.2287874528033811 8.802652907819642 0.2287874528033811 0.2287874528033811 0 1.3182503180159344 1.6989700043360187 0.5 0.0 [MT][RP]TGNS{I|L};[VG]{[TV]|[{I|L}S]}ETGNS{I|L};{[TV]|[{I|L}S]}[VG]ETGNS{I|L};[K{I|L}]DETGNS{I|L};[MT][RP]TGGGS{I|L};[VG]{[TV]|[{I|L}S]}ETGGGS{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[WP]VGNS{I|L};[VG]Q[KG]{[CA]|SS}NS{I|L};{[TV]|[{I|L}S]}[VG]ETGGGS{I|L};[K{I|L}]DETGGGS{I|L} 3.5371;3.5136;2.9272;2.8153;2.5931;2.5741;2.1393;2.0047;1.9877;1.8713 -;-;-;+;-;-;-;-;-;- + 293 1 2.757 42840.8 1.0 1101 3773 4873 SUDHL4_400M_050219_1,4876 SUDHL4_400M_050219_1,4876,KLDETGNSL False True KLDETGNSL 24.325756 488.749835193157 7520267.0 4873.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 2.855748097101847 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4877 24.329 155.0 535970.0 25 0 53237.0 + 13268 HINDSAPEV 9 77 491.2354387184543 980.4563245037084 2 491.2349426150322 MULTI CID FTMS 0 0 0 4873 356392.90625 0.4366278601439896 -6 0.2726249694824219 4 Unmodified _HINDSAPEV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 62.57269311338072 0.0246576765497938 5 [H{I|L}]NDSAPEV 9 0 + 53.043 0.0 0.0 5.41 5.41 88.428 0.0 0.0 0.0 18.15938719897659 22.50121435408015 18.15938719897659 9.208187539523747 0 1.048455006504028 1.3979400086720375 0.9247425010840048 0.0 + + [H{I|L}]NDSAPEV;[H{I|L}]GGDSAPEV;[H{I|L}][HC]{M(Oxidation (M))|F}PEV;{NN|[MP]|[D{I|L}]|[EV]}[HN]SAPEV;{NN|[MP]|[D{I|L}]|[EV]}[YV]{M(Oxidation (M))|F}PEV;{NN|[MP]|[D{I|L}]|[EV]}P{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V;{NN|[MP]|[D{I|L}]|[EV]}[YV]E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V;[TP]HH{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NT{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V 5.41;4.4708;3.5798;2.6858;2.5436;1.5718;1.1223;0.67933;0.24612 +;-;-;-;-;-;-;-;- + 168 1 2.757 66876.3 1.0 1102 3773 4873 SUDHL4_400M_050219_1,4877 SUDHL4_400M_050219_1,4877,HINDSAPEV True True HINDSAPEV 24.328818 491.234942615032 8468972.0 4873.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 6.7863359451293945 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4878 24.343 800.0 142520.0 25 0 18400.0 + -1 GIMHSCYESV 10 120 591.7496041853157 1181.4846554374312 2 591.7493774294853 MULTI CID FTMS 0 0 0 4873 134305.46875 0.8536157125949072 -2 0.0690250396728515 5 Carbamidomethyl (C) _GIMHSC(Carbamidomethyl (C))YESV_ REV__ENSG00000184371|ENST00000329608|CSF1;REV__nc|ENSG00000184371|P09603-2|CSF1;REV__nc|ENSG00000184371|P09603-3|CSF1 21.74664581756881 0.480091245866545 5 {[VA]|[{I|L}G]}YEGHCEV 9 -1 62.101 0.0 0.0 5.2562 0.0 0.0 0.0 191.05767236881096 191.05767236881096 42.74227503252014 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.8494850021680094 0.0 {[VA]|[{I|L}G]}YEGHCEV 5.2562 - 1487 + 1 2.757 89694.9 0.6000000238418579 1103 3773 4873 SUDHL4_400M_050219_1,4878 SUDHL4_400M_050219_1,4878,GIMHSCYESV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4880 24.347 23.0 2139800.0 25 0 153900.0 + 12175 GQPREPQVY 9 73 537.2720577065379 1072.5295624798755 2 537.2722656130791 MULTI CID FTMS 0 0 0 4879 2506999.75 0.9901677360900576 2 -0.0209197998046875 1 Unmodified _GQPREPQVY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 36.506200033944 0.094635877243972 5 {[QG]|[NA]}[RP]EPQVY 9 0 + 52.379 0.0 0.0 4.8837 4.8837 81.125 0.0 0.0 0.0 3.429311254306846 14.09256854528806 3.429311254306846 3.429311254306846 0 1.3494850021680094 0.7958800173440752 0.0 0.7614393726401688 + + {[QG]|[NA]}[RP]EPQVY;[AG]G[RP]EPQVY;{[QG]|[NA]}[RP]EP[AG]VY;[AG]G[RP]EP[AG]VY;[AG]P{[NV]|[RG]}EPQVY;{[QG]|[NA]}{[HG]|PP}{[RE]|[WV]}QVY;[AG]G{[HG]|PP}{[RE]|[WV]}QVY;[QP]{[NV]|[RG]}EPQVY;[AG]P{[NV]|[RG]}EP[AG]VY;[QP]{[NV]|[RG]}EP[AG]VY 4.8837;4.5639;4.0251;3.7095;3.6529;3.3537;3.0339;2.8756;2.7984;2.0171 +;-;-;-;-;-;-;-;-;- + 238 1 2.757 46276.8 1.0 1104 3774 4879 SUDHL4_400M_050219_1,4880 SUDHL4_400M_050219_1,4880,GQPREPQVY True True GQPREPQVY 24.347314 537.272265613079 100720264.0 4879.0 nc|ENSG00000211896|P01857|IGHG1;;nc|ENSG00000211892|P01861-1|IGHG4;;nc|ENSG00000211893|P01859|IGHG2;;nc|ENSG00000211897|P01860-1|IGHG3;;nc|ENSG00000211893|P01859-1|IGHG2;;nc|ENSG00000211892|P01861|IGHG4;;nc|ENSG00000211897|P01860|IGHG3;;nc|ENSG00000211896|P01857-1|IGHG1 6.7790207862854 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 4881 24.35 147.0 339200.0 25 0 36399.0 + 16592 KDRGVAVY 8 91 454.2532230952268 906.4918932572537 2 454.2535888552666 MULTI CID FTMS 0 0 0 4879 144069.421875 0.1540365081728312 4 -0.036529541015625 2 Unmodified _KDRGVAVY_ REV__ENSG00000146038|ENST00000378454|DCDC2 12.240655878213236 0.7300809844188293 5 AVY 3 -1 31.44 0.0 0.0 3.4683 0.0 0.0 555.3151998725735 0.0 555.3151998725735 0.0 12.183473304121575 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 AVY 3.4683 + + 63 1 2.757 42379.9 1.0 1105 3774 4879 SUDHL4_400M_050219_1,4881 SUDHL4_400M_050219_1,4881,KDRGVAVY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4883 24.355 140.0 341310.0 25 0 23390.0 -1 EATPMLKT 8 94 453.7336376105637 905.4527222879274 2 453.7334472537041 MULTI CID FTMS 0 0 0 4882 204503.859375 0.967704220517057 -2 0.0483036041259765 1 Oxidation (M) _EATPM(Oxidation (M))LKT_ ENSG00000153310|ENST00000694912|CYRIB;ENSG00000197872|ENST00000381323|CYRIA;ENST00000469507.1_1_2:16742256-16742729:-|nuORF;ENST00000517801.5_1_8:130863079-130874553:-|nuORF;ENST00000523288.5_1_8:130864395-130891707:-|nuORF;nc|ENSG00000153310|Q9NUQ9-2|CYRIB 15.847184025352805 0.6768015514314958 5 {[CP]|[EA]}TP{I|L}NVY 8 -1 {[CP]|[EA]}T + + 28.201 4.7493 1.5772 3.1146 3.1146 54.356 0.0 0.0 0.0 0.0 16.60728139283883 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {[CP]|[EA]}TP{I|L}NVY 3.1146 - 93 + 1 2.757 42294.2 1.0 1106 3775 4882 SUDHL4_400M_050219_1,4883 SUDHL4_400M_050219_1,4883,EATPMLKT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4884 24.361 304.0 196890.0 25 0 22485.0 + 29850 QQPASGVAY 9 97 460.7267136306355 919.438874328071 2 460.7271911501884 MULTI CID FTMS 0 0 0 4882 139526.34375 0.6764670723187667 4 -0.0521697998046875 2 Unmodified _QQPASGVAY_ ENSG00000056097|ENST00000265069|ZFR;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 20.453626601364224 0.2830276176381075 5 [PA]SGQQVAY 9 4 [PA]SGQQV + + 25.217 0.55085 0.082546 2.7426 2.7426 53.749 0.0 0.0 0.0 0.0 13.02501280419058 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [PA]SGQQVAY 2.7426 - 94 + 1 2.757 51219.9 1.0 1107 3775 4882 SUDHL4_400M_050219_1,4884 SUDHL4_400M_050219_1,4884,QQPASGVAY False True QQPASGVAY 24.361018 460.727191150188 1804497.875 4882.0 ENSG00000056097|ENST00000265069|ZFR;;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 3.4922205607096357 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4885 24.364 125.0 508280.0 25 0 64142.0 + 19827 LHDRHCKV 8 93 504.2627266532981 0 504.2630798220634 PEAK CID FTMS 0 0 0 4882 122533.5078125 0.7818958161467983 13 -0.3464717864990234 3 Unmodified _LHDRHCKV_ REV__ENSG00000067900|ENST00000399799|ROCK1 14.581692164780916 0.4900557725783909 5 DG 2 -1 9.464 0.0 0.0 0.94027 0.0 0.0 763.3887517911681 68.05137048892811 831.4401222800963 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DG 0.94027 - 42 + 1 2.757 51677.5 1.0 1108 3775 4882 SUDHL4_400M_050219_1,4885 SUDHL4_400M_050219_1,4885,LHDRHCKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4888 24.376 326.0 218630.0 25 0 31821.0 + 6366 DVSYLCETW 9 103 558.240673175753 1114.466793418306 2 558.2405273318291 MULTI CID FTMS 0 0 0 4887 63823.9140625 0.1457072386139313 -5 0.1087303161621093 1 Unmodified _DVSYLCETW_ REV__ENSG00000141447|ENST00000319481|OSBPL1A;REV__nc|ENSG00000141447|Q9BXW6-2|OSBPL1A;REV__nc|ENSG00000141447|Q9BXW6-4|OSBPL1A 28.486842064014134 0.1687311288560894 5 {[YC]|[HE]}AGAEGTGTW 11 -1 + 79.29 0.0 0.0 7.1146 7.1146 87.654 0.0 0.0 0.0 3.807748267658255 9.128498242810991 3.807748267658255 3.807748267658255 0 0.7614393726401688 0.0 1.5994850021680094 0.0 {[YC]|[HE]}AGAEGTGTW;[HQ]EAEGTGTW;{[YC]|[HE]}AQEGTGTW;{[YC]|[HE]}AGAWTGT{[DA]|[EG]};{[YC]|[HE]}QAEGTGTW;[HQ]EAWTGT{[DA]|[EG]};[DV][HN]EGTGTW;{[YC]|[HE]}AQWTGT{[DA]|[EG]};{[YC]|[HE]}QAWTGT{[DA]|[EG]};{[YC]|[HE]}AGAE{[QS]|[NT]}TW 7.1146;6.773;6.5246;6.2425;6.2327;5.9008;5.7177;5.6525;5.3606;5.0012 -;-;-;-;-;-;-;-;-;- 761 1 2.757 60658.1 1.0 1109 3777 4887 SUDHL4_400M_050219_1,4888 SUDHL4_400M_050219_1,4888,DVSYLCETW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4889 24.379 176.0 485670.0 25 0 65224.0 + 35029 SQQPASGVAY 10 108 504.2425474917189 1006.470542050238 2 504.2434265017509 MULTI CID FTMS 0 0 0 4887 129964.5390625 1.0 0 0.0 2 Unmodified _SQQPASGVAY_ ENSG00000056097|ENST00000265069|ZFR;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 8.155526934196011 0.6889124077178598 5 [H{I|L}]D 3 10 21.669 0.0 0.0 2.153 0.0 0.0 0.0 638.2773631615918 638.2773631615918 3.0854562117252016 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3252574989159953 0.0 [H{I|L}]D 2.153 - 214 1 2.757 72601.9 1.0 1110 3777 4887 SUDHL4_400M_050219_1,4889 SUDHL4_400M_050219_1,4889,SQQPASGVAY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4891 24.394 702.0 106670.0 25 0 6777.1 + 31994 RVGPESSSVY 10 120 540.7699433671222 1079.5253338010443 2 540.7706786990166 MULTI CID FTMS 0 0 0 4890 57037.55859375 0.4694820879919186 -3 0.0289535522460937 1 Unmodified _RVGPESSSVY_ ENSG00000167895|ENST00000318430|TMC8 23.78978130925829 0.4341852049148378 5 SSSVY 5 5 44.17 0.0 0.0 4.0916 0.0 0.0 538.2870350568375 0.0 538.2870350568375 0.0 30.45880017344075 0.0 0.0 0 0.8252574989159953 0.0 1.0 0.0 + SSSVY 4.0916 + + 273 1 2.757 62975.2 1.0 1111 3778 4890 SUDHL4_400M_050219_1,4891 SUDHL4_400M_050219_1,4891,RVGPESSSVY False True RVGPESSSVY 24.393804 540.770678699017 779369.1875 4890.0 ENSG00000167895|ENST00000318430|TMC8 6.538222471872966 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4892 24.402 486.0 208400.0 25 0 33186.0 + 44451 YMPPTSEAA 9 122 483.7158336377678 965.4171143423356 2 483.7154418826103 MULTI CID FTMS 0 0 0 4890 105805.3203125 0.7964803459960973 -3 0.0289535522460937 2 Unmodified _YMPPTSEAA_ ENSG00000231925|ENST00000434618|TAPBP;ENST00000480730.5_1_6:33272736-33281818:-|nuORF;nc|ENSG00000231925|O15533-2|TAPBP;nc|ENSG00000231925|O15533-3|TAPBP;nc|ENSG00000231925|O15533-4|TAPBP 18.13498045792455 0.3457906370836843 5 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[MG]|[TS]}[WH]AA 8 4 + 33.958 0.0 0.0 3.5174 3.5174 86.308 0.0 0.0 0.0 16.80082392524968 12.914930551903224 12.914930551903224 31.264100213633764 0 0.7302046884880937 2.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[MG]|[TS]}[WH]AA;{[MS]|[{M(Oxidation (M))|F}A]}[HQ]{[MG]|[TS]}[{M(Oxidation (M))|F}E] 3.5174;0.27899 -;- 175 + 1 2.757 83893.3 1.0 1112 3778 4890 SUDHL4_400M_050219_1,4892 SUDHL4_400M_050219_1,4892,YMPPTSEAA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4895 24.423 800.0 274950.0 25 0 40243.0 + 12449 GTYQPLSTR 9 169 511.7670160954108 1021.5194792576216 2 511.7670165896416 MULTI CID FTMS 0 0 0 4894 153424.046875 0.3058253754662688 -2 0.0273246765136718 1 Unmodified _GTYQPLSTR_ ENSG00000227057|ENST00000374617|WDR46;ENST00000489905.1_1_6:33248421-33255161:-|nuORF 79.59630418116434 0.0176145593575188 5 {[SA]|[TG]}YQP{I|L}STR 9 0 + 74.481 0.0 0.0 7.2912 7.2912 92.995 0.0 0.0 0.0 61.38219311648447 18.191198607853124 18.191198607853124 9.208187539523747 0 0.5554621874040891 1.0457574905606752 0.6861818737241735 1.41944517631652 + + {[SA]|[TG]}YQP{I|L}STR;{[SA]|[TG]}Y[AG]P{I|L}STR;{[SA]|[TG]}[{M(Oxidation (M))|F}E][KP]STR;[{I|L}P]{[HG]|PP}APQ[R{M(Oxidation (M))|F}];{[SA]|[TG]}Y[KT][W{I|L}]GP;[{I|L}P]{[HG]|PP}AP[AG][R{M(Oxidation (M))|F}];[PG][H{I|L}]APQ[R{M(Oxidation (M))|F}] 7.2912;6.3898;2.4351;2.1233;1.3515;0.80606;0.48084 +;-;-;-;-;-;- + 440 + 1 2.757 170645.6 0.7699999809265137 1113 3780 4894 SUDHL4_400M_050219_1,4895 SUDHL4_400M_050219_1,4895,GTYQPLSTR True True GTYQPLSTR 24.422753 511.767016589642 5424218.0 4894.0 ENST00000489905.1_1_6:33248421-33255161:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 8.030678908030191 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4896 24.437 800.0 410770.0 25 0 42579.0 19744 LGPRNEGALL 10 162 520.2967607017744 1038.5789684703486 2 520.2967407107353 MULTI CID FTMS 0 0 0 4894 236108.875 0.4245401409439167 -2 0.0273246765136718 2 Unmodified _LGPRNEGALL_ nc|ENSG00000112078|Q7Z5Y7-2|KCTD20 37.97399986684836 0.1789611706409123 5 {[VA]|[{I|L}G]}PTGA 6 5 54.64 0.0 0.0 5.261 0.0 0.0 0.0 539.2951754205686 539.2951754205686 41.541068762089 0.0 0.0 0.0 0 0.9802046884880938 1.3010299956639813 0.7302046884880937 0.0 {[VA]|[{I|L}G]}PTGA 5.261 - 593 + 1 2.757 257279.0 0.9900000095367432 1114 3780 4894 SUDHL4_400M_050219_1,4896 SUDHL4_400M_050219_1,4896,LGPRNEGALL False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 4897 24.45 800.0 216410.0 25 0 22921.0 + 30492 REESAGPAL 9 179 465.2376585344417 928.4607641356836 2 465.2365905642509 MULTI CID FTMS 0 0 0 4894 101238.5078125 0.7172258120792323 -1 0.0041084289550781 3 Unmodified _REESAGPAL_ ENST00000354336.7_1_22:21271986-21272097:+|nuORF 26.268140514670165 0.1969607489560049 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}{M(Oxidation (M))|F}W{I|L} 7 7 + 37.368 0.0 0.0 4.0247 4.0247 78.564 0.0 0.0 0.0 3.4266239960055884 11.241479775390085 3.4266239960055884 3.4266239960055884 0 0.7614393726401688 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}{M(Oxidation (M))|F}W{I|L};{[TV]|[{I|L}S]}[WD]AGPA{I|L};[PS]VMSAGPA{I|L};{[TV]|[{I|L}S]}T[Y{M(Oxidation (M))|F}]W{I|L};[VS]PMSAGPA{I|L};{[TV]|[{I|L}S]}[WD]QPA{I|L};[VS]NNSAGPA{I|L};[VG]SGNSAGPA{I|L};[W{I|L}]DSAGPA{I|L};{[TV]|[{I|L}S]}VG[HD]SKS 4.0247;3.6556;3.2742;3.2616;3.0906;2.9664;2.9416;2.8842;2.8726;2.8139 -;-;-;-;-;-;-;-;-;- 2525 1 2.757 133369.3 0.6200000047683716 1115 3780 4894 SUDHL4_400M_050219_1,4897 SUDHL4_400M_050219_1,4897,REESAGPAL False True REESAGPAL 24.450399 465.236590564251 695558.0625 4894.0 ENST00000354336.7_1_22:21271986-21272097:+|nuORF 1.9214414954185488 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4898 24.464 800.0 122870.0 25 0 9366.3 + 35058 SQTPNNTVTY 10 133 562.7642146491528 0 562.7639648318291 PEAK CID FTMS 0 0 0 4894 87259.328125 0.5655020668895963 -2 0.0273246765136718 4 Unmodified _SQTPNNTVTY_ ENSG00000131263|ENST00000332687|RLIM;nc|ENSG00000131263|Q9NVW2-2|RLIM 57.72198328787511 0.0272708386103146 5 TNTTN 5 6 20.684 0.0 0.0 1.841 0.0 0.0 381.188999511393 208.0726717584594 589.2616712698524 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.2887254899964357 TNTTN 1.841 - 275 + 1 2.757 80763.2 0.6800000071525574 1116 3780 4894 SUDHL4_400M_050219_1,4898 SUDHL4_400M_050219_1,4898,SQTPNNTVTY True True SQTPNNTVTY 24.46423 562.763964831829 800947.5625 4894.0 ENSG00000131263|ENST00000332687|RLIM;;nc|ENSG00000131263|Q9NVW2-2|RLIM 6.938700517018636 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4900 24.478 535.0 309270.0 25 0 16770.0 + 27475 PKGIWLPL 8 161 462.2898706752943 0 462.2901489138603 PEAK CID FTMS 0 0 0 4899 110814.09375 0.5198142621583811 -8 0.1624488830566406 1 Unmodified _PKGIWLPL_ REV__ENSG00000176476|ENST00000317058|SGF29;REV__ENST00000566470.1_1_16:30216115-30216589:-|nuORF;REV__ENST00000567447.1_1_16:28601466-28601547:+|nuORF 2.302733041254933 0.5920993303473642 5 C 1 -1 2.2185 0.0 0.0 0.24047 0.0 0.0 461.3567763329343 355.1874178522094 816.5441941851437 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.24047 - 10 + 1 2.753 129950.1 1.0 1117 3781 4899 SUDHL4_400M_050219_1,4900 SUDHL4_400M_050219_1,4900,PKGIWLPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4901 24.483 310.0 222200.0 25 0 21110.0 + 43579 YADRVKEL 8 97 497.2717410925401 992.5289292518802 2 497.2719909548759 MULTI CID FTMS 0 0 0 4899 163895.5 1.0 0 0.0 2 Unmodified _YADRVKEL_ ENSG00000142945|ENST00000372224|KIF2C;ENSG00000186638|ENST00000402558|KIF24;nc|ENSG00000142945|Q99661-2|KIF2C;nc|ENSG00000186638|Q5T7B8-2|KIF24;nc|ENSG00000186638|Q5T7B8-4|KIF24 39.94969957227396 0.2351327405675156 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD]VKE{I|L} 8 0 + 49.77 0.0 0.0 5.0145 5.0145 89.097 0.0 0.0 0.0 14.280768228398491 20.65720558442336 14.280768228398491 14.033350405587427 0 0.805462187404089 1.6989700043360187 0.4247425010840047 0.2396518287104437 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD]VKE{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RD]V{I|L}[SG]{I|L} 5.0145;3.6006 +;- + 92 1 2.753 56446.2 1.0 1118 3781 4899 SUDHL4_400M_050219_1,4901 SUDHL4_400M_050219_1,4901,YADRVKEL False True YADRVKEL 24.483168 497.271990954876 824787.875 4899.0 ENSG00000142945|ENST00000372224|KIF2C;;nc|ENSG00000186638|Q5T7B8-4|KIF24;;nc|ENSG00000142945|Q99661-2|KIF2C;;nc|ENSG00000186638|Q5T7B8-2|KIF24;;ENSG00000186638|ENST00000402558|KIF24 3.686698436737061 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4902 24.497 800.0 151060.0 25 0 15840.0 + 23839 LVGTQQLEQA 10 135 543.7935542589023 1085.5725555846043 2 543.7938110232353 MULTI CID FTMS 0 0 0 4899 98065.96875 1.0 0 0.0 3 Unmodified _LVGTQQLEQA_ REV__ENSG00000172037|ENST00000305544|LAMB2;REV__ENST00000477225.1_1_3:49160862-49161360:-|nuORF 27.628801355627647 0.3479284626772844 5 V{I|L}GE[SG]C{I|L}K 9 -1 67.406 0.0 0.0 6.2093 0.0 0.0 0.0 196.0729616754516 196.0729616754516 48.22473167784722 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 1.0356668758921828 V{I|L}GE[SG]C{I|L}K 6.2093 - 2970 + 1 2.753 98871.7 0.5099999904632568 1119 3781 4899 SUDHL4_400M_050219_1,4902 SUDHL4_400M_050219_1,4902,LVGTQQLEQA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4903 24.511 800.0 78170.0 25 0 8137.5 13755 HRWQDNIKEED 11 78 735.3415545920193 1468.6685562508385 2 735.3412353396416 MULTI CID FTMS 0 0 0 4899 80174.515625 0.7796850045649806 -2 0.0619754791259765 4 Unmodified _HRWQDNIKEED_ ENSG00000007402|ENST00000424201|CACNA2D2;nc|ENSG00000007402|Q9NY47-3|CACNA2D2;nc|ENSG00000007402|Q9NY47-4|CACNA2D2;nc|ENSG00000007402|Q9NY47-5|CACNA2D2;nc|ENSG00000007402|Q9NY47|CACNA2D2 13.614867670302877 0.751941774060705 5 DEED 4 7 43.175 0.0 0.0 2.9398 0.0 0.0 962.5140425183632 0.0 962.5140425183632 0.0 27.417665879116623 0.0 0.0 0 0.6989700043360187 0.0 0.4247425010840047 0.0 DEED 2.9398 - 268 1 2.753 51974.4 0.4699999988079071 1120 3781 4899 SUDHL4_400M_050219_1,4903 SUDHL4_400M_050219_1,4903,HRWQDNIKEED False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4905 24.527 800.0 133880.0 25 0 15570.0 5411 DLLAWWPNPQ 10 119 620.3133614553385 1238.612169977477 2 620.3134033083916 MULTI CID FTMS 0 0 0 4904 114890.0234375 0.3525823374935997 18 -0.5700912475585938 1 Unmodified _DLLAWWPNPQ_ ENSG00000160161|ENST00000291495|CILP2 18.1463463914782 0.5430639438673815 5 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP 9 5 62.679 0.0 0.0 5.0604 0.0 0.0 0.0 354.1438831945269 354.1438831945269 40.80661350286704 0.0 0.0 0.0 0 2.6861818737241734 0.8538719643217619 0.2742275032520141 0.0 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP 5.0604 - 1804 1 2.753 85181.4 0.5400000214576721 1121 3782 4904 SUDHL4_400M_050219_1,4905 SUDHL4_400M_050219_1,4905,DLLAWWPNPQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4906 24.541 800.0 168190.0 25 0 45688.0 -1 0 53 1176.4980537134957 3526.472331740687 3 1176.831347644329 MULTI CID FTMS 0 0 0 4904 384306.375 0.1917889204061111 6 -0.1857109069824218 2 5 E 1 -1 6.9897 0.0 0.0 0.19821 0.0 0.0 2870.2439339886887 524.1625343884231 3394.406468377112 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19821 - 7 + 1 2.753 114295.5 0.8700000047683716 1122 3782 4904 SUDHL4_400M_050219_1,4906 SUDHL4_400M_050219_1,4906, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4907 24.555 800.0 181410.0 25 0 48134.0 + 10455 FTGEDYRSLKS 11 104 434.8820598697517 0 434.8818542361259 PEAK CID FTMS 0 0 0 4904 94847.8359375 0.6845078527259661 16 -0.4776630401611328 3 Unmodified _FTGEDYRSLKS_ REV__ENSG00000081803|ENST00000449022|CADPS2;REV__nc|ENSG00000081803|Q86UW7-2|CADPS2;REV__nc|ENSG00000081803|Q86UW7-3|CADPS2 8.155526934196011 0.4672964927559179 5 TG 2 -1 8.5835 0.0 0.0 0.98917 0.0 0.0 96.32584899074772 610.3311861627561 706.6570351535039 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TG 0.98917 + + 12 + 1 2.753 117191.7 0.4300000071525574 1123 3782 4904 SUDHL4_400M_050219_1,4907 SUDHL4_400M_050219_1,4907,FTGEDYRSLKS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4908 24.569 800.0 74271.0 25 0 18531.0 -1 0 42 1164.7950730422058 3491.3633897268173 3 1165.464160144329 MULTI CID FTMS 0 0 0 4904 93350.7265625 0.7354175047304959 -1 0.0466156005859375 4 5 W 1 -1 6.9897 0.0 0.0 0.2002 0.0 0.0 2164.748840021543 1137.5075365993578 3302.2563766209005 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.2002 - 9 + 1 2.753 57677.9 0.3799999952316284 1124 3782 4904 SUDHL4_400M_050219_1,4908 SUDHL4_400M_050219_1,4908, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4910 24.574 80.0 745770.0 25 0 82098.0 + 42281 VSQVGKEL 8 89 430.2478761550677 858.4811993769355 2 430.2476989626884 MULTI CID FTMS 0 0 0 4909 447008.625 0.1870012285576323 4 -0.1018199920654296 1 Unmodified _VSQVGKEL_ ENSG00000168209|ENST00000307365|DDIT4 21.53697664764585 0.591232569029014 5 [VS]QD 4 5 30.916 0.0 0.0 3.6013 0.0 0.0 0.0 426.2771951805727 426.2771951805727 19.282074429355127 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.75 0.0 [VS]QD 3.6013 - 143 1 2.753 53610.7 1.0 1125 3783 4909 SUDHL4_400M_050219_1,4910 SUDHL4_400M_050219_1,4910,VSQVGKEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4911 24.587 800.0 30119.0 25 0 7709.8 -1 0 31 1183.817836712691 3548.431680738273 3 1184.154345691204 MULTI CID FTMS 0 0 0 4909 60182.0546875 0.485564617643147 5 -0.1277904510498047 2 5 G{M(Oxidation (M))|F} 2 -1 4.6927 0.0 0.0 0.13225 0.0 0.0 2146.759880056436 1194.558706281892 3341.318586338328 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 0.13225 - 3 + 1 2.753 29246.7 0.4000000059604645 1126 3783 4909 SUDHL4_400M_050219_1,4911 SUDHL4_400M_050219_1,4911, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4912 24.59 99.0 685710.0 25 0 61299.0 + 35491 STMSTNGIPR 10 72 532.2633045499663 1062.5120561667325 2 532.2637817263603 MULTI CID FTMS 0 0 0 4909 404430.375 0.013516888123331 -9 0.22625732421875 3 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 63.960520009940105 0.0261970246776379 5 {[MG]|[TS]}MSTNG{I|L}RP 10 2 + 75.482 0.0 0.0 7.1042 7.1042 85.947 0.0 0.0 0.0 7.269987279362624 2.430380486862944 2.430380486862944 2.430380486862944 0 0.5 0.0 0.3494850021680094 1.1861818737241734 {[MG]|[TS]}MSTNG{I|L}RP;{[MG]|[TS]}MSTNG{I|L}PR;{[MG]|[TS]}MSTGGG{I|L}RP;{[MG]|[TS]}MSTGGG{I|L}PR;[MT][W{I|L}][{I|L}V]DW;{[MG]|[TS]}M[{I|L}V][YN][HV] 7.1042;6.8754;6.2416;6.0129;1.2326;0.90996 -;+;-;-;-;- + 165 + 1 2.753 58686.4 1.0 1127 3783 4909 SUDHL4_400M_050219_1,4912 SUDHL4_400M_050219_1,4912,STMSTNGIPR True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4913 24.596 382.0 203460.0 25 0 32241.0 + 27447 PIVDTGAF 8 124 410.2167843836159 818.4190158340317 2 410.2163879275322 MULTI CID FTMS 0 0 0 4909 109572.6640625 1.0 0 0.0 4 Unmodified _PIVDTGAF_ REV__ENSG00000066933|ENST00000356056|MYO9A;REV__nc|ENSG00000066933|B2RTY4-2|MYO9A;REV__nc|ENSG00000066933|B2RTY4-4|MYO9A;REV__nc|ENSG00000066933|B2RTY4-5|MYO9A 10.183394434864962 0.7604730176254005 5 [DV]P{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 7 -1 + 15.679 0.0 0.0 1.9157 1.9157 82.964 0.0 0.0 0.0 6.28160185277784 2.4911445705044635 2.4911445705044635 15.678732196748587 0 0.3494850021680094 0.0 0.0 0.0 [DV]P{I|L}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 1.9157 - 64 + 1 2.753 62716.6 1.0 1128 3783 4909 SUDHL4_400M_050219_1,4913 SUDHL4_400M_050219_1,4913,PIVDTGAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4915 24.601 101.0 394530.0 25 0 79861.0 + 43738 YDPLTPASI 9 70 488.7507666103254 975.4869802874508 2 488.7507812380791 MULTI CID FTMS 0 0 0 4914 324915.25 0.2217471235735168 5 -0.125589370727539 1 Unmodified _YDPLTPASI_ REV__ENSG00000152894|ENST00000368226|PTPRK;REV__ENST00000524481.5_1_6:128321419-128841710:-|nuORF;REV__ENST00000524534.5_1_6:128384662-128841530:-|nuORF;REV__ENST00000531050.5_1_6:128321419-128718758:-|nuORF;REV__nc|ENSG00000152894|Q15262-3|PTPRK;REV__nc|ENSG00000152894|Q15262-4|PTPRK;REV__nc|ENSG00000152894|Q15262|PTPRK 12.531546534597751 0.4974689918368763 5 S{I|L} 2 -1 20.445 0.0 0.0 2.0959 0.0 0.0 757.3599794103009 0.0 757.3599794103009 0.0 7.971062485323515 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 S{I|L} 2.0959 + + 24 + 1 2.753 36403.6 1.0 1129 3784 4914 SUDHL4_400M_050219_1,4915 SUDHL4_400M_050219_1,4915,YDPLTPASI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4916 24.606 230.0 267830.0 25 0 48459.0 + 13269 HINDSAPEV 9 75 491.2354387184543 980.4563245037084 2 491.2354614138603 MULTI CID FTMS 0 0 0 4914 108747.453125 0.133229834043807 5 -0.125589370727539 2 Unmodified _HINDSAPEV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 26.88365393820708 0.1891292719743517 5 [EP][YT]{M(Oxidation (M))|F} 5 9 29.361 0.0 0.0 2.9946 0.0 0.0 0.0 340.1504078407572 340.1504078407572 15.38174478714478 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.75 0.0 [EP][YT]{M(Oxidation (M))|F} 2.9946 - 99 1 2.753 51930.4 1.0 1130 3784 4914 SUDHL4_400M_050219_1,4916 SUDHL4_400M_050219_1,4916,HINDSAPEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4917 24.62 800.0 172290.0 25 0 15016.0 + -1 EEQLQQIR 8 171 521.9926319116802 3646.897488115561 7 522.2770263552666 MULTI CID FTMS 0 0 0 4914 99907.1015625 0.9837071242388892 -1 0.0276412963867187 3 ENSG00000186395|ENST00000269576|KRT10;ENSG00000186393|ENST00000335552|KRT26;Q7Z3Y9;P13645;P02535-1 5 SQ{I|L}QQ{I|L}R 7 -1 47.036 0.0 0.0 1.2898 0.0 0.0 2775.415257035561 0.0 2775.415257035561 0.0 31.22391248143311 0.0 0.0 0 0.0 0.0 0.0 1.1610892374447828 SQ{I|L}QQ{I|L}R 1.2898 - 376 + 1 2.753 106446.1 0.4900000095367431 1131 3784 4914 SUDHL4_400M_050219_1,4917 SUDHL4_400M_050219_1,4917, False False EEQLQQIR 24.619717 522.2794 577001.875 4914.0 ENSG00000186395|ENST00000269576|KRT10;;ENSG00000186393|ENST00000335552|KRT26;;Q7Z3Y9;;P13645;;P02535-1 5.794882297515869 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4919 24.625 64.0 688330.0 25 0 44009.0 + 12176 GQPREPQVY 9 71 537.2720577065379 1072.5295624798755 2 537.2724487185478 MULTI CID FTMS 0 0 0 4918 775686.0 0.3063659063136134 13 -0.3688068389892578 1 Unmodified _GQPREPQVY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 27.628801355627647 0.1796483985696185 5 VY 2 7 25.005 0.0 0.0 2.3314 0.0 0.0 792.3879436828039 0.0 792.3879436828039 0.0 11.138661236417114 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + VY 2.3314 + + 60 + 1 2.753 39938.5 1.0 1132 3785 4918 SUDHL4_400M_050219_1,4919 SUDHL4_400M_050219_1,4919,GQPREPQVY False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 4920 24.63 286.0 208810.0 25 0 34384.0 -1 EATPMLKT 8 94 453.7336376105637 905.4527222879274 2 453.7332336306572 MULTI CID FTMS 0 0 0 4918 108114.6484375 0.5115942648340868 8 -0.2196121215820312 2 Oxidation (M) _EATPM(Oxidation (M))LKT_ ENSG00000153310|ENST00000694912|CYRIB;ENSG00000197872|ENST00000381323|CYRIA;ENST00000469507.1_1_2:16742256-16742729:-|nuORF;ENST00000517801.5_1_8:130863079-130874553:-|nuORF;ENST00000523288.5_1_8:130864395-130891707:-|nuORF;nc|ENSG00000153310|Q9NUQ9-2|CYRIB 21.74664581756881 0.5868176546531598 5 T{I|L}P[WP] 5 -1 21.198 0.0 0.0 2.3411 0.0 0.0 293.14073378730626 0.0 293.14073378730626 0.0 7.1445565089121725 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 T{I|L}P[WP] 2.3411 - 122 1 2.753 50379.4 1.0 1133 3785 4918 SUDHL4_400M_050219_1,4920 SUDHL4_400M_050219_1,4920,EATPMLKT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4921 24.633 175.0 271350.0 25 0 20524.0 + 19977 LIKETTTGY 9 75 513.2793877552425 1024.544222577285 2 513.2795287966728 MULTI CID FTMS 0 0 0 4918 272064.0625 0.9131025264770418 2 -0.0508842468261718 3 Unmodified _LIKETTTGY_ nc|ENSG00000120802|P42166|TMPO 16.942295170755138 0.3780752226737986 5 {I|L}{I|L}[R{M(Oxidation (M))|F}][VG]TGY 9 4 + 34.147 0.0 0.0 3.3329 3.3329 86.158 0.0 0.0 0.0 15.474921663574296 7.140012553530973 7.140012553530973 34.147059354858705 0 0.3054621874040891 2.0 0.0 0.0 {I|L}{I|L}[R{M(Oxidation (M))|F}][VG]TGY 3.3329 - 58 + 1 2.753 44118.4 1.0 1134 3785 4918 SUDHL4_400M_050219_1,4921 SUDHL4_400M_050219_1,4921,LIKETTTGY False True LIKETTTGY 24.633329 513.279528796673 1391471.375 4918.0 nc|ENSG00000120802|P42166|TMPO 1.9181054830551147 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 4922 24.638 225.0 308530.0 25 0 60371.0 8025 ENEIRIAY 8 94 504.2627266532981 0 504.2625305056572 PEAK CID FTMS 0 0 0 4918 123567.96875 0.7884967916141474 23 -0.5936527252197266 4 Unmodified _ENEIRIAY_ ENSG00000203970|ENST00000371148|DEFB110 9.347437153973935 0.5488964601725408 5 D 1 8 4.525 0.0 0.0 0.44957 0.0 0.0 763.38872127359 125.07225977115468 888.4609810447447 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 D 0.44957 - 15 + 1 2.753 56892.7 1.0 1135 3785 4918 SUDHL4_400M_050219_1,4922 SUDHL4_400M_050219_1,4922,ENEIRIAY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4923 24.651 800.0 153450.0 25 0 37588.0 + 12188 GQQSSYPGY 9 121 493.7148354506471 985.4151179680944 2 493.7139770388603 MULTI CID FTMS 0 0 0 4918 95099.2265625 1.0 0 0.0 5 Unmodified _GQQSSYPGY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 32.116972079565 0.1225432171549407 5 YPGY 4 5 24.412 0.0 0.0 2.4774 0.0 0.0 487.2027594249286 0.0 487.2027594249286 0.0 12.629713750992533 0.0 0.0 0 0.0 0.0 0.0 0.0 + YPGY 2.4774 + + 198 + 1 2.753 97773.7 0.9800000190734864 1136 3785 4918 SUDHL4_400M_050219_1,4923 SUDHL4_400M_050219_1,4923,GQQSSYPGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4925 24.657 140.0 283950.0 25 0 27554.0 -1 PWATCGHTW 9 78 558.240673175753 1114.466793418306 2 558.2401611208916 MULTI CID FTMS 0 0 0 4924 146279.65625 0.3339501359429432 4 -0.0895862579345703 1 Carbamidomethyl (C) _PWATC(Carbamidomethyl (C))GHTW_ ENSG00000130821|ENST00000253122|SLC6A8;nc|ENSG00000130821|P48029-4|SLC6A8 7.910154910731844 0.6385446671287552 5 TW 2 -1 19.949 0.0 0.0 1.79 0.0 0.0 809.3295081173279 0.0 809.3295081173279 0.0 3.80456295278406 0.0 0.0 0 0.5 0.0 0.0 0.0 TW 1.79 + + 68 + 1 2.753 36201.1 1.0 1137 3786 4924 SUDHL4_400M_050219_1,4925 SUDHL4_400M_050219_1,4925,PWATCGHTW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4926 24.671 800.0 178580.0 25 0 11739.0 + 32431 SAASASAAL 9 85 748.3843399833611 747.377063516761 1 748.3838989138603 MULTI CID FTMS 0 0 0 4924 150982.5 0.39122891374265 -5 0.1871414184570312 2 Unmodified _SAASASAAL_ ENSG00000124766|ENST00000244745|SOX4 71.13359017698441 0.0206607516130725 5 {[SA]|[TG]}ASAASA{I|L} 9 2 + 76.224 0.0 0.0 10.199 10.199 87.408 0.0 0.0 0.0 13.467874862246552 14.97302484056646 13.467874862246552 1.32068444291761 0 0.5891368308784531 1.0 2.7302046884880937 0.0 {[SA]|[TG]}ASAASA{I|L};{[SA]|[TG]}ASASAA{I|L};{[SA]|[TG]}AASASA{I|L};{[SA]|[TG]}AASSAA{I|L};{[SA]|[TG]}SAAASA{I|L};{[SA]|[TG]}SAASAA{I|L};[QT]SAASA{I|L};[QT]SASAA{I|L};[QT]ASASA{I|L};[QT]ASSAA{I|L} 10.199;10.022;9.7979;9.6212;8.8214;8.6447;8.3969;8.2201;7.9959;7.8192 -;+;-;-;-;-;-;-;-;- + 1022 1 2.753 103176.6 0.4900000095367431 1138 3786 4924 SUDHL4_400M_050219_1,4926 SUDHL4_400M_050219_1,4926,SAASASAAL True True SAASASAAL 24.670606 748.38389891386 1783256.875 4924.0 ENSG00000124766|ENST00000244745|SOX4 5.153251489003499 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4928 24.678 238.0 227040.0 25 0 30212.0 + 12450 GTYQPLSTR 9 87 511.7670160954108 1021.5194792576216 2 511.7668945193291 MULTI CID FTMS 0 0 0 4927 148999.125 0.2970050280605371 5 -0.1217994689941406 1 Unmodified _GTYQPLSTR_ ENSG00000227057|ENST00000374617|WDR46;ENST00000489905.1_1_6:33248421-33255161:-|nuORF 14.40537977576856 0.4467465336100671 5 {[SA]|[TG]}YQP{I|L}{[MG]|[TS]}R 9 0 + 33.409 0.0 0.0 3.2705 3.2705 83.131 0.0 0.0 0.0 21.19012901194968 3.925449767853316 3.925449767853316 9.208187539523756 0 0.0 0.8860566476931632 0.0 0.4247425010840047 + + {[SA]|[TG]}YQP{I|L}{[MG]|[TS]}R;{[SA]|[TG]}Y[AG]P{I|L}{[MG]|[TS]}R 3.2705;2.3691 +;- + 33 + 1 2.753 47774.6 1.0 1139 3787 4927 SUDHL4_400M_050219_1,4928 SUDHL4_400M_050219_1,4928,GTYQPLSTR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4929 24.682 211.0 210620.0 25 0 16241.0 + 1039 AGEYTCYYF 9 84 558.7197792483292 1115.4250055634584 2 558.7203246951103 MULTI CID FTMS 0 0 0 4927 173397.203125 0.8768316707454082 -4 0.1018199920654296 2 Unmodified _AGEYTCYYF_ REV__ENSG00000160796|ENST00000450053|NBEAL2;REV__nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;REV__nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 4.75600775471527 0.7486543447549536 5 [{I|L}A]Q 3 -1 21.427 0.0 0.0 1.9209 0.0 0.0 0.0 800.2226489562896 800.2226489562896 2.385606273598309 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]Q 1.9209 - 62 1 2.753 41267.6 1.0 1140 3787 4927 SUDHL4_400M_050219_1,4929 SUDHL4_400M_050219_1,4929,AGEYTCYYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4930 24.686 258.0 203180.0 25 0 14617.0 + 35524 STMSTNGIPR 10 90 540.263227076485 0 540.2621337771416 PEAK CID FTMS 0 0 0 4927 160420.28125 0.2842853410311639 -6 0.2063560485839843 3 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 61.60191391372663 0.0217332099032232 5 {M(Oxidation (M))|F}STNG{I|L}R 7 3 50.042 0.0 0.0 4.6399 0.0 0.0 188.0854008309012 112.0409411066039 300.12634193750506 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.8494850021680094 0.7614393726401688 {M(Oxidation (M))|F}STNG{I|L}R 4.6399 - 167 + 1 2.753 44874.3 1.0 1141 3787 4927 SUDHL4_400M_050219_1,4930 SUDHL4_400M_050219_1,4930,STMSTNGIPR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4931 24.697 585.0 162470.0 25 0 22746.0 + 28276 PRIASNAGSIA 11 118 528.7937094347208 1055.5728659362414 2 528.7937499880791 MULTI CID FTMS 0 0 0 4927 121533.484375 0.7078574555276572 -4 0.1018199920654296 4 Unmodified _PRIASNAGSIA_ ENSG00000125691|ENST00000479035|RPL23;ENST00000584583.1_1_17:37006387-37006753:-|nuORF 23.80106514851385 0.5333463718001408 5 TKAGS[{I|L}A] 7 6 39.737 0.0 0.0 3.7645 0.0 0.0 409.2028370587906 0.0 409.2028370587906 0.0 16.51818526217312 0.0 0.0 0 1.0 0.0 0.5 0.0 TKAGS[{I|L}A] 3.7645 - 414 1 2.753 75633.9 1.0 1142 3787 4927 SUDHL4_400M_050219_1,4931 SUDHL4_400M_050219_1,4931,PRIASNAGSIA False True PRIASNAGSIA 24.696673 528.793749988079 707849.75 4927.0 ENST00000584583.1_1_17:37006387-37006753:-|nuORF;;ENSG00000125691|ENST00000479035|RPL23 3.930889129638672 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4933 24.704 180.0 262560.0 25 0 34340.0 -1 0 74 442.2286208043128 441.2213443377128 1 442.2283813357353 MULTI CID FTMS 0 0 0 4932 243889.5625 0.6944616255002045 -6 0.1857109069824218 1 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y 3 -1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} + + 10.379 0.45757 0.17589 2.3522 2.3522 53.229 0.0 0.0 0.0 0.0 8.18709123296056 0.0 0.0 0 0.0 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Y 2.3522 - 11 + 1 2.745 44355.5 1.0 1143 3788 4932 SUDHL4_400M_050219_1,4933 SUDHL4_400M_050219_1,4933, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4934 24.709 270.0 201240.0 25 0 17659.0 + 11668 KVIDQQNGL 9 91 507.78289563273705 1013.551238332274 2 507.7824890017509 MULTI CID FTMS 0 0 0 4932 130733.8046875 0.5612198102402034 -2 0.0451850891113281 2 Unmodified _GLDQDVRVL_ ENSG00000132383|ENST00000254719|RPA1 15.847184025352805 0.4077185912009129 5 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DQQNG{I|L} 9 6 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DQQN + + 13.188 8.9963 1.0899 1.3011 1.3011 52.605 0.0 0.0 0.0 0.0 -4.805906063131719 -4.805906063131719 0.0 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DQQNG{I|L} 1.3011 - 60 + 1 2.745 45888.4 1.0 1144 3788 4932 SUDHL4_400M_050219_1,4934 SUDHL4_400M_050219_1,4934,GLDQDVRVL False False KVIDQQNGL 24.70891 507.782489001751 1030438.6875 4932.0 ENSG00000132383|ENST00000254719|RPA1 -0.1937633162985245 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4935 24.712 152.0 396690.0 25 0 36906.0 + -1 MAAARQAGEI 10 94 517.2590044145264 1032.5034558958528 2 517.2591430544853 MULTI CID FTMS 0 0 0 4932 202913.3125 0.7227016011852205 -4 0.1001491546630859 3 Oxidation (M) _M(Oxidation (M))AAARQAGEI_ REV__ENSG00000104369|ENST00000342232|JPH1 13.042465956692816 0.6287021003332052 5 {[SA]|[TG]}MSTN{[VA]|[{I|L}G]}PR 10 -1 + 43.421 0.0 0.0 4.2055 4.2055 83.694 0.0 0.0 0.0 32.49762037205986 9.731975075880328 9.731975075880328 9.164539485499247 0 0.3054621874040891 0.8239087409443188 0.0 0.2742275032520141 {[SA]|[TG]}MSTN{[VA]|[{I|L}G]}PR;{[SA]|[TG]}MSTGG{[VA]|[{I|L}G]}PR;{[SA]|[TG]}M{[QV]|[N{I|L}]|[RA]|[KV]}[MN]PR;{[SA]|[TG]}M{I|L}{I|L}[MD]PR;{[SA]|[TG]}M{I|L}{I|L}[W{I|L}]{[CP]|[EA]} 4.2055;3.3179;2.6195;2.1574;0.75275 -;-;-;-;- 116 + 1 2.745 55773.2 1.0 1145 3788 4932 SUDHL4_400M_050219_1,4935 SUDHL4_400M_050219_1,4935,MAAARQAGEI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4936 24.722 585.0 256530.0 25 0 32083.0 + 16121 ITSSAVTTALK 11 143 546.3182579124627 1090.6219628917254 2 546.3181640505791 MULTI CID FTMS 0 0 0 4932 125685.6796875 0.7186745515924938 -2 0.0451850891113281 4 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 35.61225514009592 0.279986979807413 5 {I|L}TSSA 5 6 57.467 0.0 0.0 5.2692 0.0 0.0 0.0 628.3665521412638 628.3665521412638 24.8940094072303 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7302046884880937 0.0 + {I|L}TSSA 5.2692 + + 1726 + 1 2.745 117800.4 1.0 1146 3788 4932 SUDHL4_400M_050219_1,4936 SUDHL4_400M_050219_1,4936,ITSSAVTTALK False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_1 4938 24.727 127.0 466840.0 25 0 42534.0 + 17120 KLGPAPKTL 9 92 462.7974420212957 923.5803311093912 2 462.7972289919853 MULTI CID FTMS 0 0 0 4937 465965.5625 0.9581769695760828 -4 0.102294921875 1 Unmodified _KLGPAPKTL_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 43.9818466556824 0.0535980856389242 5 K{I|L}G[PA]PKT{I|L} 9 0 + 55.384 0.0 0.0 5.9967 5.9967 91.376 0.0 0.0 0.0 47.936909460092 11.478174818886371 11.478174818886371 10.72559982972642 0 2.778659694992122 0.0 0.3494850021680094 0.0 + + K{I|L}G[PA]PKT{I|L};K{I|L}[QP]PKT{I|L};[K{I|L}]G[PA]PKT{I|L};[K{I|L}][QP]PKT{I|L};[KP][Q{I|L}]PKT{I|L} 5.9967;4.8354;4.2268;3.3099;3.2852 +;-;+;-;- + 116 + 1 2.745 50709.0 1.0 1147 3789 4937 SUDHL4_400M_050219_1,4938 SUDHL4_400M_050219_1,4938,KLGPAPKTL True True KLGPAPKTL 24.727153 462.797228991985 17640027.0 4937.0 ENSG00000071794|ENST00000310053|HLTF;;nc|ENSG00000071794|Q14527-2|HLTF 5.073858737945557 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4939 24.736 523.0 126740.0 25 0 10959.0 6876 EEEKEQDEDEY 11 93 721.7755195411145 1441.5364861490289 2 721.7753173708916 MULTI CID FTMS 0 0 0 4937 180008.796875 0.6580418841468778 -3 0.0706253051757812 2 Unmodified _EEEKEQDEDEY_ ENSG00000152133|ENST00000674370|GPATCH11;ENST00000473067.1_1_2:37315561-37321362:+|nuORF;nc|ENSG00000152133|Q8N954-2|GPATCH11;nc|ENSG00000152133|Q8N954|GPATCH11 13.90604991867851 0.7458848613461305 5 {[DA]|[EG]}EEGEWE 8 6 52.698 0.0 0.0 3.6557 0.0 0.0 0.0 493.1823351082664 493.1823351082664 7.478726659965524 0.0 0.0 0.0 0 0.0 0.8860566476931632 2.27697634932738 0.0 {[DA]|[EG]}EEGEWE 3.6557 - 2896 1 2.745 50978.9 1.0 1148 3789 4937 SUDHL4_400M_050219_1,4939 SUDHL4_400M_050219_1,4939,EEEKEQDEDEY False True SVEGEGEEEGEEY 24.73637 721.775317370892 1332863.125 4937.0 ENSG00000167552|ENST00000301071|TUBA1A;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;ENSG00000123416|ENST00000336023|TUBA1B;;nc|ENSG00000123416|P68363-2|TUBA1B 4.824078957239787 2.0 False 13.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4940 24.741 262.0 334320.0 25 0 51621.0 + 39548 VAYAVHLP 8 89 435.2459534005896 868.4773538679791 2 435.2455322146416 MULTI CID FTMS 0 0 0 4937 100579.328125 1.0 0 0.0 3 Unmodified _VAYAVHLP_ REV__ENSG00000204316|ENST00000309352|MRPL38;REV__ENST00000477736.5_1_17:73897061-73900795:-|nuORF;REV__ENST00000493104.5_1_17:73897660-73900929:-|nuORF;REV__ENST00000494179.5_1_17:73897660-73900929:-|nuORF 6.354104778181461 0.7857632046190106 5 {M(Oxidation (M))|F} 1 -1 10.837 0.0 0.0 1.2479 0.0 0.0 703.3975789429776 0.0 703.3975789429776 0.0 0.7981738677325083 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2479 - 56 + 1 2.745 70581.5 1.0 1149 3789 4937 SUDHL4_400M_050219_1,4940 SUDHL4_400M_050219_1,4940,VAYAVHLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4943 24.761 800.0 167230.0 25 0 10490.0 4725 DEEEPETPR 9 118 551.237969824335 1100.46138671547 2 551.2374755740166 MULTI CID FTMS 0 0 0 4942 133969.046875 0.8737521620834184 1 -0.0475749969482421 1 Unmodified _DEEEPETPR_ ENST00000326786.4_1_1:157106146-157108174:-|nuORF 4.75600775471527 0.7486543447549536 5 {M(Oxidation (M))|F} 1 9 10.969 0.0 0.0 0.99677 0.0 0.0 935.382008518984 0.0 935.382008518984 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.99677 - 28 + 1 2.745 104718.4 0.8799999952316284 1150 3791 4942 SUDHL4_400M_050219_1,4943 SUDHL4_400M_050219_1,4943,DEEEPETPR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4944 24.765 201.0 368270.0 25 0 57130.0 + 42345 SLIDKTTAA 9 96 460.2582199070504 918.5018868809008 2 460.2581970095634 MULTI CID FTMS 0 0 0 4942 219921.84375 0.9261119184205496 -1 0.0038528442382812 2 Unmodified _VTASTAVAVT_ ENSG00000124562|ENST00000244520|SNRPC;ENST00000474635.1_2_6:34730443-34740721:+|nuORF 24.020572477871973 0.4289996903560794 5 {[TV]|[{I|L}S]}{I|L}D 4 8 35.93 0.0 0.0 3.9118 0.0 0.0 0.0 487.2517794244751 487.2517794244751 10.081820819563248 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}D 3.9118 - 386 + 1 2.745 62274.1 1.0 1151 3791 4942 SUDHL4_400M_050219_1,4944 SUDHL4_400M_050219_1,4944,VTASTAVAVT False False SLIDKTTAA 24.765045 460.258197009563 1148494.25 4942.0 ENSG00000124562|ENST00000244520|SNRPC;;ENST00000474635.1_2_6:34730443-34740721:+|nuORF 4.6525600751241045 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4945 24.779 800.0 193490.0 25 0 61609.0 -1 0 135 476.3041264188096 475.2968499522096 1 476.3041564822197 MULTI CID FTMS 0 0 0 4942 101830.375 0.4662930251703234 -7 0.1484031677246093 3 5 Y 1 -1 15.485 0.0 0.0 3.2579 0.0 0.0 294.2225224149033 0.0 294.2225224149033 0.0 5.206963425791127 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.2579 - 32 + 1 2.745 122880.3 0.7200000286102295 1152 3791 4942 SUDHL4_400M_050219_1,4945 SUDHL4_400M_050219_1,4945, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4946 24.793 800.0 57902.0 25 0 8959.7 6275 DTVPWYLRL 9 71 581.8157865725354 1161.6170202118708 2 581.8159057497978 MULTI CID FTMS 0 0 0 4942 88459.9296875 0.9212269942843084 -1 0.0038528442382812 4 Unmodified _DTVPWYLRL_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT 4.3292370932331545 0.7635526921153418 5 YM[R{I|L}] 4 6 19.693 0.0 0.0 1.6953 0.0 0.0 580.3187123029312 0.0 580.3187123029312 0.0 10.295607260593282 0.0 0.0 0 0.5 0.0 0.0 0.0 YM[R{I|L}] 1.6953 - 15 1 2.745 38986.4 0.7099999785423279 1153 3791 4942 SUDHL4_400M_050219_1,4946 SUDHL4_400M_050219_1,4946,DTVPWYLRL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4948 24.809 800.0 123810.0 25 0 30550.0 -1 0 48 1176.498654228457 3526.474133285572 3 1177.167773425579 MULTI CID FTMS 0 0 0 4947 236101.0 0.8963487279119999 -1 0.0475749969482421 1 5 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.31105 0.0 0.0 2000.6839244006096 1318.6736827438033 3319.357607144413 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.31105 - 14 + 1 2.745 86394.2 0.5 1154 3792 4947 SUDHL4_400M_050219_1,4948 SUDHL4_400M_050219_1,4948, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4949 24.817 433.0 203810.0 25 0 23792.0 + 1189 AICPNNHEV 9 119 498.7316180386829 995.4486831441658 2 498.7314025759697 MULTI CID FTMS 0 0 0 4947 89280.4453125 0.9686874962915244 2 -0.0870246887207031 2 Unmodified _AICPNNHEV_ ENSG00000130429|ENST00000646101|ARPC1B;ENST00000484375.5_1_7:98972330-98988614:+|nuORF;ENST00000484600.6_1_7:98983337-98987636:+|nuORF 30.63653989081413 0.1413794767160703 5 [{I|L}A]CP 4 5 45.445 0.0 0.0 4.5653 0.0 0.0 0.0 608.2430683958557 608.2430683958557 32.346368802282015 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + [{I|L}A]CP 4.5653 + + 279 + 1 2.745 71774.4 1.0 1155 3792 4947 SUDHL4_400M_050219_1,4949 SUDHL4_400M_050219_1,4949,AICPNNHEV False True AICPNNHEV 24.816511 498.73140257597 569334.125 4947.0 ENST00000484600.6_1_7:98983337-98987636:+|nuORF;;ENSG00000130429|ENST00000646101|ARPC1B;;ENST00000484375.5_1_7:98972330-98988614:+|nuORF 7.223664283752441 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4950 24.826 519.0 173840.0 25 0 46091.0 + -1 LGKAGKRTFQ 10 93 574.3315195904521 0 574.3265258669853 PEAK CID FTMS 0 0 0 4947 109342.1953125 1.0 0 0.0 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LGKAGKRTFQ_ REV__chr6:137145773-137147722|26|21.62|0.5|5.45|-|2|IL22RA2,IL22RA2|2 12.240655878213236 0.3578162629684178 5 KTT{I|L}[{I|L}V]P 7 -1 42.083 0.0 0.0 3.6701 0.0 0.0 64.00120929096495 327.13083826236567 391.1320475533306 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.3494850021680094 0.0 KTT{I|L}[{I|L}V]P 3.6701 - 97 + 1 2.745 73584.4 1.0 1156 3792 4947 SUDHL4_400M_050219_1,4950 SUDHL4_400M_050219_1,4950,LGKAGKRTFQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4951 24.84 800.0 32887.0 25 0 5898.5 -1 0 31 1153.7624466937682 3458.265510681505 3 1154.764941394329 MULTI CID FTMS 0 0 0 4947 80546.296875 1.0 0 0.0 4 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.745 31301.9 0.3600000143051147 1157 3792 4947 SUDHL4_400M_050219_1,4951 SUDHL4_400M_050219_1,4951, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4953 24.856 800.0 38208.0 25 0 7049.5 -1 0 34 1164.7950730422058 3491.3633897268173 3 1165.126391589642 MULTI CID FTMS 0 0 0 4952 27392.943359375 0.1527331895979815 10 -0.2968101501464844 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.745 33869.5 0.3499999940395355 1158 3793 4952 SUDHL4_400M_050219_1,4953 SUDHL4_400M_050219_1,4953, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4954 24.866 567.0 199990.0 25 0 16515.0 + 8852 EYVSSQLGRP 10 125 568.2926544118675 1134.5707558905349 2 568.2925903201103 MULTI CID FTMS 0 0 0 4952 118683.453125 0.0912874239521947 -7 0.1879425048828125 2 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 29.081581746732265 0.3152867722954398 5 {M(Oxidation (M))|F}STNG{I|L}RP 8 -1 68.269 0.0 0.0 6.0172 0.0 0.0 244.141395942496 0.0 244.141395942496 0.0 47.779419084123234 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.7302046884880937 {M(Oxidation (M))|F}STNG{I|L}RP 6.0172 - 567 + 1 2.745 86100.5 1.0 1159 3793 4952 SUDHL4_400M_050219_1,4954 SUDHL4_400M_050219_1,4954,EYVSSQLGRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4955 24.88 800.0 76573.0 25 0 18662.0 -1 0 37 1183.474431804252 3547.401466012956 3 1184.143237292767 MULTI CID FTMS 0 0 0 4952 86119.046875 0.1798263850688366 -5 0.1427574157714843 3 5 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.26679 0.0 0.0 2000.702443651431 1339.5919893854127 3340.294433036844 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.26679 - 19 + 1 2.745 56197.9 0.3600000143051147 1160 3793 4952 SUDHL4_400M_050219_1,4955 SUDHL4_400M_050219_1,4955, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4957 24.884 3.1 14851000.0 25 0 1467100.0 + 35492 STMSTNGIPR 10 62 532.2633045499663 1062.5120561667325 2 532.2642700076103 MULTI CID FTMS 0 0 0 4956 17212872.0 0.5752892944928232 2 -0.0280666351318359 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 47.594388314883695 0.0942698883389255 5 {[MG]|[TS]}MSTNG{I|L}RP 10 2 + 70.75 0.0 0.0 6.6588 6.6588 85.67 0.0 0.0 0.0 7.269987279362624 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.5 0.0 0.3807196863200844 0.3807196863200844 {[MG]|[TS]}MSTNG{I|L}RP;{[MG]|[TS]}MSTNG{I|L}PR;{[MG]|[TS]}MSTGGG{I|L}RP;{[MG]|[TS]}MSTGGG{I|L}PR 6.6588;6.3755;5.7963;5.5129 -;+;-;- + 111 + 1 2.735 44295.2 1.0 1161 3794 4956 SUDHL4_400M_050219_1,4957 SUDHL4_400M_050219_1,4957,STMSTNGIPR True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4958 24.891 394.0 175850.0 25 0 8005.6 + 12177 GQPREPQVY 9 104 537.2720577065379 1072.5295624798755 2 537.2719604372978 MULTI CID FTMS 0 0 0 4956 176046.25 0.0695314456292404 22 -0.4514408111572265 2 Unmodified _GQPREPQVY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 36.506200033944 0.094635877243972 5 VAKQVY 6 6 40.648 0.0 0.0 3.79 0.0 0.0 366.1520733214757 0.0 366.1520733214757 0.0 18.22341821517319 0.0 0.0 0 1.524227503252014 0.0 0.0 0.0 VAKQVY 3.79 - 295 + 1 2.735 62003.0 1.0 1162 3794 4956 SUDHL4_400M_050219_1,4958 SUDHL4_400M_050219_1,4958,GQPREPQVY True True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 4959 24.898 381.0 153590.0 25 0 46646.0 + 37961 TMKDFNHSY 9 79 571.7508831640725 1141.487213394945 2 571.7501708865166 MULTI CID FTMS 0 0 0 4956 86204.890625 0.959833604413648 -2 0.0870246887207031 3 Unmodified _TMKDFNHSY_ ENSG00000183726|ENST00000374358|TMEM50A;ENST00000480937.5_1_1:25666968-25687193:+|nuORF 24.020572477871973 0.2255576514309169 5 [MT]K 3 6 27.324 0.0 0.0 2.3937 0.0 0.0 0.0 778.2807711236936 778.2807711236936 11.8396798272512 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 + [MT]K 2.3937 + + 62 + 1 2.735 51326.5 1.0 1163 3794 4956 SUDHL4_400M_050219_1,4959 SUDHL4_400M_050219_1,4959,TMKDFNHSY False True TMKDFNHSY 24.898121 571.750170886517 460847.96875 4956.0 ENST00000480937.5_1_1:25666968-25687193:+|nuORF;;ENSG00000183726|ENST00000374358|TMEM50A 4.463428179423015 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4960 24.903 293.0 237360.0 25 0 14051.0 + 12138 GQKPWSQHY 9 113 377.5174160877146 1129.5304188633438 3 377.5170471072197 MULTI CID FTMS 0 0 0 4956 82907.328125 0.5135738136124909 -4 0.1384525299072265 4 Unmodified _GQKPWSQHY_ ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU 5.296884461304476 0.7297726132274777 5 [KA]NPW{[QS]|[NT]}HY 9 3 [KA]N + + 21.427 7.1745 2.2909 1.897 1.897 52.807 0.0 0.0 0.0 0.0 11.593793813122062 0.0 0.0 0 0.0 0.0 0.0 0.0 [KA]NPW{[QS]|[NT]}HY 1.897 - 83 + 1 2.735 63532.9 1.0 1164 3794 4956 SUDHL4_400M_050219_1,4960 SUDHL4_400M_050219_1,4960,GQKPWSQHY False True GQKPWSQHY 24.90349 377.51704710722 1085220.75 4956.0 ENSG00000153187|ENST00000640218|HNRNPU;;nc|ENSG00000153187|Q00839-2|HNRNPU 6.549219449361165 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4963 24.919 485.0 292090.0 25 0 50255.0 + 12901 GWGPPPSL 8 126 405.7098896705394 809.4052264078788 2 405.7109557986259 MULTI CID FTMS 0 0 0 4962 131654.8125 0.7861666743797556 -1 0.0040225982666015 1 Unmodified _GWGPPPSL_ REV__nc|ENSG00000180068|P47883|OR3A4P 14.581692164780916 0.6954967302934248 5 YHKYS{I|L} 6 -1 + 44.497 0.0 0.0 5.4975 5.4975 90.892 0.0 0.0 0.0 13.870530719924382 6.080918290271605 6.080918290271605 15.358112372763712 0 0.6331596456423735 1.2218487496163564 0.2302046884880938 0.0 YHKYS{I|L};Y{I|L}EWS{I|L};{I|L}YEWS{I|L};{I|L}[YQ]HH{I|L};YRR[C(Carbamidomethyl (C))R] 5.4975;3.6001;3.2282;1.4683;0.92009 -;-;-;-;- 127 + 1 2.735 116024.1 1.0 1165 3796 4962 SUDHL4_400M_050219_1,4963 SUDHL4_400M_050219_1,4963,GWGPPPSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4964 24.932 800.0 159820.0 25 0 16772.0 -1 0 166 548.2913430001016 547.2840665335016 1 548.2910644412041 MULTI CID FTMS 0 0 0 4962 107686.4296875 0.7357986355774774 4 -0.1734600067138672 2 5 Y 1 -1 13.979 0.0 0.0 2.5543 0.0 0.0 366.20992210166406 0.0 366.20992210166406 0.0 2.402908934145847 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5543 - 94 + 1 2.735 103160.0 0.6800000071525574 1166 3796 4962 SUDHL4_400M_050219_1,4964 SUDHL4_400M_050219_1,4964, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4965 24.946 800.0 109890.0 25 0 17923.0 -1 ISPSRMPQPPN 11 103 620.3133614553385 1238.612169977477 2 620.3134643435478 MULTI CID FTMS 0 0 0 4962 88878.3359375 0.2727558973337002 32 -0.7360382080078125 3 Oxidation (M) _ISPSRM(Oxidation (M))PQPPN_ ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP 14.40537977576856 0.7354982482299568 5 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP[QP]N 12 -1 {NN|[MP]|[D{I|L}]|[EV]}PAPP + + 44.486 25.891 4.3861 3.5916 3.5916 55.253 0.0 0.0 0.0 0.0 19.454902455430947 0.0 0.0 0 1.424742501084005 0.0 0.0 1.2614393726401687 {NN|[MP]|[D{I|L}]|[EV]}PAPPPPP[QP]N 3.5916 - 840 + 1 2.735 70269.2 0.6200000047683716 1167 3796 4962 SUDHL4_400M_050219_1,4965 SUDHL4_400M_050219_1,4965,ISPSRMPQPPN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4967 24.952 94.0 459940.0 25 0 35270.0 + 35525 STMSTNGIPR 10 85 540.263227076485 0 540.2609741091728 PEAK CID FTMS 0 0 0 4966 342893.4375 0.6076512087964911 4 -0.1627941131591797 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 55.50274090549119 0.030438250997227 5 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}R 7 3 38.544 0.0 0.0 3.5738 0.0 0.0 188.0845553164757 112.04093347720936 300.12548879368507 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 0.3807196863200844 0.6747425010840047 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}R 3.5738 - 78 + 1 2.733 39278.9 1.0 1168 3797 4966 SUDHL4_400M_050219_1,4967 SUDHL4_400M_050219_1,4967,STMSTNGIPR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4968 24.963 636.0 155640.0 25 0 21535.0 + 11634 VAAPPPKNSF 10 121 514.2824489172942 1026.5503449013884 2 514.2834960818291 MULTI CID FTMS 0 0 0 4966 48588.890625 0.2679676952025366 16 -0.3330307006835937 2 Unmodified _GLAPGHLSLY_ ENSG00000165458|ENST00000298229|INPPL1;nc|ENSG00000165458|O15357-2|INPPL1 13.614867670302877 0.6190977555336379 5 {[VA]|[{I|L}G]}A 3 7 25.29 0.0 0.0 2.4636 0.0 0.0 0.0 782.384456800079 782.384456800079 7.29745883207972 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.0 + {[VA]|[{I|L}G]}A 2.4636 + + 194 1 2.733 80951.4 1.0 1169 3797 4966 SUDHL4_400M_050219_1,4968 SUDHL4_400M_050219_1,4968,GLAPGHLSLY False False VAAPPPKNSF 24.96331 514.283496081829 3763810.75 4966.0 ENSG00000165458|ENST00000298229|INPPL1;;nc|ENSG00000165458|O15357-2|INPPL1 6.4211273193359375 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4969 24.965 93.0 790230.0 25 0 146340.0 + 8959 FANGRSTGL 9 98 461.7406406663399 921.4667283994798 2 461.7407104372978 MULTI CID FTMS 0 0 0 4966 475032.21875 0.4391528288017569 -2 0.0427932739257812 3 Unmodified _FANGRSTGL_ ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A 19.256988751693697 0.3154191944385105 5 A[RD]QNAE 7 7 41.484 0.0 0.0 4.502 0.0 0.0 119.07394606757968 0.0 119.07394606757968 0.0 27.971062485323515 0.0 0.0 0 0.6747425010840047 0.0 0.0 0.0 A[RD]QNAE 4.502 - 101 1 2.733 64032.1 1.0 1170 3797 4966 SUDHL4_400M_050219_1,4969 SUDHL4_400M_050219_1,4969,FANGRSTGL False True FANGRSTGL 24.965341 461.740710437298 5018270.0 4966.0 ENSG00000136518|ENST00000429709|ACTL6A;;nc|ENSG00000136518|O96019-2|ACTL6A;;ENSG00000077080|ENST00000160382|ACTL6B 0.793480713541309 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4970 24.974 505.0 209360.0 25 0 31095.0 + -1 VRTEESQMT 9 130 548.7491209834806 1095.483689033761 2 548.7497436404228 MULTI CID FTMS 0 0 0 4966 133172.796875 0.3404870269068779 -4 0.10693359375 4 Oxidation (M) _VRTEESQM(Oxidation (M))T_ REV__ENSG00000145349|ENST00000511664|CAMK2D;REV__nc|ENSG00000145349|Q13557-10|CAMK2D;REV__nc|ENSG00000145349|Q13557-11|CAMK2D;REV__nc|ENSG00000145349|Q13557-12|CAMK2D;REV__nc|ENSG00000145349|Q13557-3|CAMK2D;REV__nc|ENSG00000145349|Q13557-4|CAMK2D;REV__nc|ENSG00000145349|Q13557-5|CAMK2D;REV__nc|ENSG00000145349|Q13557-6|CAMK2D;REV__nc|ENSG00000145349|Q13557-8|CAMK2D;REV__nc|ENSG00000145349|Q13557-9|CAMK2D;REV__nc|ENSG00000145349|Q13557|CAMK2D 15.847184025352805 0.4077185912009129 5 EQDWY 5 -1 39.016 0.0 0.0 3.5615 0.0 0.0 356.20583091290854 0.0 356.20583091290854 0.0 19.32690365379361 0.0 0.0 0 0.0 0.0 0.9749073637206092 0.7742275032520141 EQDWY 3.5615 - 625 + 1 2.733 88849.8 1.0 1171 3797 4966 SUDHL4_400M_050219_1,4970 SUDHL4_400M_050219_1,4970,VRTEESQMT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4971 24.985 593.0 289800.0 25 0 84135.0 + 12159 GQNAQTMAY 9 131 492.21627936434805 982.418005795496 2 492.2165405154228 MULTI CID FTMS 0 0 0 4966 103945.1875 0.1660407901000284 -9 0.2496910095214843 5 Unmodified _GQNAQTMAY_ ENSG00000009307|ENST00000358528|CSDE1;ENST00000483030.1_1_1:115263111-115268953:-|nuORF;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 67.34385681178166 0.0221257235307089 5 {[QG]|[NA]}QGQT 6 5 31.251 0.0 0.0 3.181 0.0 0.0 0.0 380.12757328268657 380.12757328268657 7.517953935007629 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 1.666386562212267 {[QG]|[NA]}QGQT 3.181 - 655 1 2.733 136792.1 1.0 1172 3797 4966 SUDHL4_400M_050219_1,4971 SUDHL4_400M_050219_1,4971,GQNAQTMAY True True GQNAQTMAY 24.98461 492.216540515423 6825974.0 4966.0 nc|ENSG00000009307|O75534-2|CSDE1;;nc|ENSG00000009307|O75534-4|CSDE1;;ENSG00000009307|ENST00000358528|CSDE1;;nc|ENSG00000009307|O75534-3|CSDE1;;ENST00000483030.1_1_1:115263111-115268953:-|nuORF 6.332653999328613 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4972 24.989 207.0 305070.0 25 0 124400.0 42092 VRECKEVL 8 60 488.2675455961685 0 488.2679321169853 PEAK CID FTMS 0 0 0 4966 210359.96875 0.4184611626057223 35 -0.7983798980712891 6 Unmodified _VRECKEVL_ ENSG00000085511|ENST00000392142|MAP3K4;nc|ENSG00000085511|Q9Y6R4-2|MAP3K4 16.942295170755138 0.4635191396245973 5 {I|L} 1 7 6.9897 0.0 0.0 0.71725 0.0 0.0 776.3466928995653 82.06688104801015 858.4135739475754 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.71725 + + 5 + 1 2.733 57068.5 1.0 1173 3797 4966 SUDHL4_400M_050219_1,4972 SUDHL4_400M_050219_1,4972,VRECKEVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4974 24.995 199.0 526510.0 25 0 50764.0 + 17121 KLGPAPKTL 9 118 462.7974420212957 923.5803311093912 2 462.7974731326103 MULTI CID FTMS 0 0 0 4973 423626.03125 0.8711131026054483 5 -0.1476154327392578 1 Unmodified _KLGPAPKTL_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 67.83816525789305 0.0219346420158844 5 K{I|L}GPAPKT{I|L} 9 0 + 54.119 0.0 0.0 5.8597 5.8597 85.63 0.0 0.0 0.0 42.903951852060594 8.939680468906637 8.939680468906637 4.889465451849091 0 2.716190326687972 0.0 0.9386218330464624 0.0 + + K{I|L}GPAPKT{I|L};K{I|L}[QP]PKT{I|L};[K{I|L}]GPAPKT{I|L};[K{I|L}]GPAPTK{I|L};[QP]{I|L}KPKT{I|L};[K{I|L}][QP]PKT{I|L};[KP][Q{I|L}]PKT{I|L};K{I|L}GPA[KT]P{I|L};[QP]{I|L}KPTK{I|L};[K{I|L}][QP]PTK{I|L} 5.8597;5.3303;4.7992;4.3393;4.3313;4.1268;4.0357;3.8781;3.8714;3.6669 +;-;+;-;-;-;-;-;-;- + 805 + 1 2.733 83300.6 1.0 1174 3798 4973 SUDHL4_400M_050219_1,4974 SUDHL4_400M_050219_1,4974,KLGPAPKTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4975 25.009 800.0 102870.0 25 0 15380.0 -1 0 68 1123.368414396331 2244.722275859462 2 1123.367480456829 MULTI CID FTMS 0 0 0 4973 145533.5 0.5129619753125583 -18 0.5821456909179688 2 5 N 1 -1 6.5938 0.0 0.0 0.29375 0.0 0.0 1705.5367514260731 422.1315590809963 2127.668310507069 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 N 0.29375 - 16 + 1 2.733 68845.1 0.4300000071525574 1175 3798 4973 SUDHL4_400M_050219_1,4975 SUDHL4_400M_050219_1,4975, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4976 25.01 7.4 7087700.0 25 0 1404100.0 + 9771 FNDPNAKEM 9 72 533.2369622656316 1064.4593715980632 2 533.2375366091728 MULTI CID FTMS 0 0 0 4973 6521345.5 0.9844424518126532 -1 0.0422611236572265 3 Unmodified _FNDPNAKEM_ ENSG00000056097|ENST00000265069|ZFR 53.40400417844725 0.0329064971918313 5 ANPDSR 6 7 39.157 0.0 0.0 3.6786 0.0 0.0 406.1891346662125 0.0 406.1891346662125 0.0 12.48702572160336 0.0 0.0 0 1.4402794777712158 0.0 0.0 0.3494850021680094 ANPDSR 3.6786 - 209 1 2.733 46043.4 1.0 1176 3798 4973 SUDHL4_400M_050219_1,4976 SUDHL4_400M_050219_1,4976,FNDPNAKEM True True FNDPNAKEM 25.009908 533.237536609173 62841184.0 4973.0 ENSG00000056097|ENST00000265069|ZFR 10.272228399912516 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4977 25.014 201.0 554880.0 25 0 107560.0 + 14742 ILDAGGHNV 9 110 448.23537367739385 894.4561944215877 2 448.2353698611259 MULTI CID FTMS 0 0 0 4973 253029.171875 0.0824542905992904 -7 0.2436981201171875 4 Unmodified _ILDAGGHNV_ ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1 39.94969957227396 0.0757326808254658 5 {I|L}{I|L}DANH{[NV]|[RG]} 8 2 + 70.882 0.0 0.0 7.9246 7.9246 89.097 0.0 0.0 0.0 50.77102198441887 5.4047248240310495 5.4047248240310495 3.935752032695888 0 0.8494850021680094 2.0 0.3807196863200844 0.850576203518622 {I|L}{I|L}DANH{[NV]|[RG]};{I|L}{I|L}DAGGH{[NV]|[RG]};{I|L}{I|L}DQGH{[NV]|[RG]} 7.9246;7.4846;7.4334 -;+;- + 474 + 1 2.733 90834.7 1.0 1177 3798 4973 SUDHL4_400M_050219_1,4977 SUDHL4_400M_050219_1,4977,ILDAGGHNV True True ILDAGGHNV 25.013745 448.235369861126 25571338.0 4973.0 ENSG00000173692|ENST00000308696|PSMD1;;nc|ENSG00000173692|Q99460-2|PSMD1 6.068663438161214 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4978 25.017 179.0 365920.0 25 0 42347.0 + 10516 FVDEGKATV 9 83 483.25034026026094 964.486127587322 2 483.2505981326103 MULTI CID FTMS 0 0 0 4973 182222.34375 0.4927817058970127 -2 0.0810317993164062 5 Unmodified _FVDEGKATV_ ENSG00000165501|ENST00000298288|LRR1;ENST00000540712.1_1_14:50068361-50081211:+|nuORF;nc|ENSG00000165501|Q96L50-2|LRR1 12.240655878213236 0.5053430591993562 5 Y 1 9 14.604 0.0 0.0 1.5142 0.0 0.0 783.4118916027501 0.0 783.4118916027501 0.0 3.393943874995172 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5142 - 68 + 1 2.733 53521.1 1.0 1178 3798 4973 SUDHL4_400M_050219_1,4978 SUDHL4_400M_050219_1,4978,FVDEGKATV False True FVDEGKATV 25.017214 483.25059813261 1515157.875 4973.0 nc|ENSG00000165501|Q96L50-2|LRR1;;ENST00000540712.1_1_14:50068361-50081211:+|nuORF;;ENSG00000165501|ENST00000298288|LRR1 3.963879108428955 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4979 25.024 360.0 260870.0 25 0 30782.0 + -1 RMLPHAPGV 9 88 497.2686842163741 992.5228154995484 2 497.2690612673759 MULTI CID FTMS 0 0 0 4973 111720.34375 0.1507214119498494 -12 0.337137222290039 6 Oxidation (M) _RM(Oxidation (M))LPHAPGV_ ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;ENSG00000116478|ENST00000373548|HDAC1 16.942295170755138 0.3780752226737986 5 [TA]VA 4 -1 26.669 0.0 0.0 2.687 0.0 0.0 0.0 647.309106353317 647.309106353317 11.095756168365014 0.0 0.0 0.0 0 1.0 0.0 0.8252574989159953 0.0 [TA]VA 2.687 - 216 1 2.733 76878.9 1.0 1179 3798 4973 SUDHL4_400M_050219_1,4979 SUDHL4_400M_050219_1,4979,RMLPHAPGV False False RMLPHAPGV 25.023691 497.269061267376 11091243.0 4973.0 ENSG00000196591|ENST00000519065|HDAC2;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 6.0027618408203125 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4980 25.038 800.0 123980.0 25 0 8373.4 + 29977 KMWDPHNDPNA 11 137 662.7976308218134 1323.5807087104267 2 662.7923461794853 MULTI CID FTMS 0 0 0 4973 88061.1875 0.3660543565047159 -17 0.5242786407470703 7 Unmodified _QTAEERMEMIS_ nc|ENSG00000104852|P08621-2|SNRNP70;nc|ENSG00000104852|P08621-3|SNRNP70;ENSG00000104852|ENST00000598441|SNRNP70 22.65808497894818 0.560183898709508 5 [NP]HDPDAV 8 11 39.803 0.0 0.0 3.0072 0.0 0.0 0.0 475.191239500647 475.191239500647 9.44635519715133 0.0 0.0 0.0 0 0.5 0.6020599913279624 0.2742275032520141 0.2887254899964357 [NP]HDPDAV 3.0072 - 2632 1 2.733 78242.8 0.5199999809265137 1180 3798 4973 SUDHL4_400M_050219_1,4980 SUDHL4_400M_050219_1,4980,QTAEERMEMIS False False KMWDPHNDPNA 25.037531 662.792346179485 920281.875 4973.0 nc|ENSG00000104852|P08621-2|SNRNP70;;nc|ENSG00000104852|P08621-3|SNRNP70;;ENSG00000104852|ENST00000598441|SNRNP70 9.325501441955566 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4981 25.051 800.0 60683.0 25 0 9661.6 + 12139 GQKPWSQHY 9 82 565.7730744863594 1129.5315960395187 2 565.7724487185478 MULTI CID FTMS 0 0 0 4973 88347.890625 1.0 0 0.0 8 Unmodified _GQKPWSQHY_ ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU 18.1463463914782 0.3454829746528889 5 {[QG]|[NA]}K[HD]R 6 5 12.637 0.0 0.0 1.1188 0.0 0.0 0.0 405.1572359674438 405.1572359674438 5.647124887093826 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 {[QG]|[NA]}K[HD]R 1.1188 - 40 + 1 2.733 43027.9 0.5099999904632568 1181 3798 4973 SUDHL4_400M_050219_1,4981 SUDHL4_400M_050219_1,4981,GQKPWSQHY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4983 25.068 800.0 65826.0 25 0 18985.0 -1 0 46 1099.7872544958316 3296.339934087695 3 1100.121142566204 MULTI CID FTMS 0 0 0 4982 139102.5 1.0 0 0.0 1 5 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.33277 0.0 0.0 1709.6102720777324 1379.6314006943812 3089.241672772114 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.33277 - 10 + 1 2.733 52156.4 0.4000000059604645 1182 3799 4982 SUDHL4_400M_050219_1,4983 SUDHL4_400M_050219_1,4983, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4984 25.071 152.0 434610.0 25 0 75253.0 + 7529 EIDEENKP 8 96 487.2274198047775 972.440286676355 2 487.2278320193291 MULTI CID FTMS 0 0 0 4982 145254.4375 0.1991644944774247 -20 0.6490383148193359 2 Unmodified _EIDEENKP_ REV__chr11:60462485-60466998|47|73.77|0.78|6.57|+|ENST00000528313|MS4A1,MS4A1;REV__ENSG00000156738|ENST00000345732|MS4A1;REV__nc|ENSG00000156738|P11836-2|MS4A1 8.593279151180031 0.7721714526254883 5 {I|L}{I|L}PPH 5 -1 42.971 0.0 0.0 4.4189 0.0 0.0 0.0 412.0990694635376 412.0990694635376 29.47621246364342 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}PPH 4.4189 - 63 + 1 2.733 54426.8 1.0 1183 3799 4982 SUDHL4_400M_050219_1,4984 SUDHL4_400M_050219_1,4984,EIDEENKP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4985 25.081 581.0 231730.0 25 0 20339.0 + 43792 YENEVALRQ 9 153 561.2833857968557 1120.5522186605112 2 561.2835571169853 MULTI CID FTMS 0 0 0 4982 100571.65625 0.294388225396695 -8 0.3064823150634765 3 Unmodified _YENEVALRQ_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 59.36838082759317 0.0264317782606298 5 YENEVA{I|L}RQ 9 0 + 104.81 0.0 0.0 9.3533 9.3533 95.222 0.0 0.0 0.0 36.47817481888637 10.31743128760553 10.31743128760553 9.208187539523747 0 1.1382104921644451 2.0 0.4247425010840047 1.2346368802282015 + + YENEVA{I|L}RQ;YEGGEVA{I|L}RQ;YEQDVA{I|L}RQ;YE[AG]DVA{I|L}RQ 9.3533;8.5315;8.4813;7.6595 +;-;-;- + 412 + 1 2.733 101749.7 1.0 1184 3799 4982 SUDHL4_400M_050219_1,4985 SUDHL4_400M_050219_1,4985,YENEVALRQ True True YENEVALRQ 25.08092 561.283557116985 1575770.75 4982.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 6.805039882659912 2.0 True 9.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 4987 25.087 177.0 487900.0 25 0 228110.0 24157 LYRHMQAKGI 10 71 406.2250198090782 0 406.2248412966728 PEAK CID FTMS 0 0 0 4986 342156.59375 1.0 0 0.0 1 Unmodified _LYRHMQAKGI_ ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000080503|P51531-2|SMARCA2 3.876331618118854 0.3961065659209837 5 S 1 10 4.8464 0.0 0.0 0.598 0.0 0.0 423.2279105644968 297.14667688541255 720.3745874499093 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 S 0.598 - 1 + 1 2.733 73078.6 1.0 1185 3800 4986 SUDHL4_400M_050219_1,4987 SUDHL4_400M_050219_1,4987,LYRHMQAKGI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4988 25.091 229.0 398650.0 25 0 62696.0 11421 GGRAPAGF 8 108 366.6931421137632 731.3717312943264 2 366.6925842165947 MULTI CID FTMS 0 0 0 4986 211333.421875 0.3087976940639269 -8 0.2885513305664062 2 Unmodified _GGRAPAGF_ ENST00000555122.1_1_14:105421221-105423995:-|nuORF 0.7936320650641473 0.8195151834710337 5 S{I|L} 2 8 44.776 0.0 0.0 6.1222 0.0 0.0 0.0 528.2314585225242 528.2314585225242 25.268477219983225 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 S{I|L} 6.1222 - 54 + 1 2.733 77625.5 1.0 1186 3800 4986 SUDHL4_400M_050219_1,4988 SUDHL4_400M_050219_1,4988,GGRAPAGF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 4989 25.096 250.0 284320.0 25 0 16055.0 -1 HYGCEYRKDP 10 99 442.1964992239711 1323.5676682721132 3 442.1956359744072 MULTI CID FTMS 0 0 0 4986 163775.078125 1.0 0 0.0 3 Carbamidomethyl (C) _HYGC(Carbamidomethyl (C))EYRKDP_ ENSG00000173681|ENST00000379682|BCLAF3;nc|ENSG00000173681|A2AJT9-2|BCLAF3;nc|ENSG00000173681|A2AJT9-3|BCLAF3 3.5870582119611467 0.710044248540513 5 {[WN]|[YH]}YPN 5 -1 20.942 0.0 0.0 1.5822 0.0 0.0 0.0 646.2657633251007 646.2657633251007 8.177915127358126 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[WN]|[YH]}YPN 1.5822 - 189 1 2.733 61880.5 1.0 1187 3800 4986 SUDHL4_400M_050219_1,4989 SUDHL4_400M_050219_1,4989,HYGCEYRKDP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4990 25.103 422.0 207840.0 25 0 56891.0 + 12173 GQPLRPQANY 10 93 572.2989096273612 1142.5832663215224 2 572.2989379763603 MULTI CID FTMS 0 0 0 4986 96604.921875 1.0 0 0.0 4 Unmodified _GQPLRPQANY_ ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN;nc|ENSG00000112851|Q96RT1-9|ERBIN 27.628801355627647 0.3479284626772844 5 {[QG]|[NA]}P{I|L}[DP]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 9 5 25.785 0.0 0.0 2.2567 0.0 0.0 0.0 125.03592859439688 125.03592859439688 5.775254389854066 0.0 0.0 0.0 0 0.5 0.494850021680094 0.0 0.0 {[QG]|[NA]}P{I|L}[DP]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 2.2567 - 145 + 1 2.733 72978.4 1.0 1188 3800 4986 SUDHL4_400M_050219_1,4990 SUDHL4_400M_050219_1,4990,GQPLRPQANY False True GQPLRPQANY 25.103435 572.29893797636 714608.0625 4986.0 nc|ENSG00000112851|Q96RT1-9|ERBIN;;nc|ENSG00000112851|Q96RT1-2|ERBIN;;ENSG00000112851|ENST00000284037|ERBIN;;nc|ENSG00000112851|Q96RT1-4|ERBIN;;nc|ENSG00000112851|Q96RT1-8|ERBIN;;nc|ENSG00000112851|Q96RT1-6|ERBIN 3.22053329149882 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4991 25.109 308.0 219920.0 25 0 37955.0 + -1 VTVRPGLAM 9 92 480.2701564344692 958.5257599357384 2 480.2712585330009 MULTI CID FTMS 0 0 0 4986 114328.6796875 1.0 0 0.0 5 Oxidation (M) _VTVRPGLAM(Oxidation (M))_ ENSG00000099977|ENST00000398344|DDT;ENSG00000099974|ENST00000215770|DDTL;nc|ENSG00000099977|P30046-2|DDT;ENST00000444947.2_1_22:24315904-24316657:-|nuORF 29.081581746732265 0.1611639662936252 5 A{M(Oxidation (M))|F} 2 -1 24.068 0.0 0.0 2.5109 0.0 0.0 722.4427357404312 0.0 722.4427357404312 0.0 11.088942403590565 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 A{M(Oxidation (M))|F} 2.5109 + + 54 1 2.733 56933.2 1.0 1189 3800 4986 SUDHL4_400M_050219_1,4991 SUDHL4_400M_050219_1,4991,VTVRPGLAM False False VTVRPGLAM 25.109039 480.271258533001 484739.0 4986.0 ENSG00000099977|ENST00000398344|DDT;;ENSG00000099974|ENST00000215770|DDTL;;nc|ENSG00000099977|P30046-2|DDT;;ENST00000444947.2_1_22:24315904-24316657:-|nuORF 4.408188978830974 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 4993 25.114 45.0 971180.0 25 0 95088.0 + 8853 EYVSSQLGRP 10 70 568.2926544118675 1134.5707558905349 2 568.2925292849541 MULTI CID FTMS 0 0 0 4992 1221687.5 0.9396820012654724 1 -0.0051174163818359 1 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 17.11289562659939 0.5604042439455784 5 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 8 -1 49.073 0.0 0.0 4.3253 0.0 0.0 244.1427814884724 0.0 244.1427814884724 0.0 36.30891852431841 0.0 0.0 0 0.0 0.0 0.805462187404089 0.6861818737241735 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 4.3253 - 185 + 1 2.734 38785.9 1.0 1190 3801 4992 SUDHL4_400M_050219_1,4993 SUDHL4_400M_050219_1,4993,EYVSSQLGRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 4995 25.131 800.0 120590.0 25 0 34157.0 -1 0 48 1183.474431804252 3547.401466012956 3 1183.808154284954 MULTI CID FTMS 0 0 0 4994 179447.234375 0.3436436289312132 4 -0.0498847961425781 1 5 E 1 -1 6.9897 0.0 0.0 0.19704 0.0 0.0 2891.173210094772 524.1619356744749 3415.335145769247 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19704 - 14 + 1 2.734 85103.5 0.6299999952316284 1191 3802 4994 SUDHL4_400M_050219_1,4995 SUDHL4_400M_050219_1,4995, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4996 25.136 304.0 263160.0 25 0 93733.0 -1 0 87 454.26217358531215 453.25489711871217 1 454.2630187869072 MULTI CID FTMS 0 0 0 4994 106087.96875 0.3739949096463886 9 -0.1334571838378906 2 5 Y 1 -1 13.979 0.0 0.0 3.0842 0.0 0.0 272.1802949232028 0.0 272.1802949232028 0.0 3.600796517029785 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.0842 - 9 + 1 2.734 65502.9 1.0 1192 3802 4994 SUDHL4_400M_050219_1,4996 SUDHL4_400M_050219_1,4996, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 4999 25.145 117.0 716410.0 25 0 93685.0 + 1773 ALSDGVHKI 9 81 470.2660312999657 938.5175096667316 2 470.2653991580009 MULTI CID FTMS 0 0 0 4998 448420.40625 0.3015465451367451 -5 0.0886783599853515 1 Unmodified _ALSDGVHKI_ ENSG00000158234|ENST00000360570|FAIM;ENST00000470889.5_1_3:138329799-138348004:+|nuORF;ENST00000491175.1_1_3:138340270-138348004:+|nuORF;nc|ENSG00000158234|Q9NVQ4-2|FAIM;nc|ENSG00000158234|Q9NVQ4|FAIM 29.081581746732265 0.1611639662936252 5 [{I|L}A]SDRH[K{I|L}] 8 2 + 57.484 0.0 0.0 6.125 6.125 91.165 0.0 0.0 0.0 43.55896923271672 5.484550065040281 5.484550065040281 9.262137858390815 0 0.7302046884880937 2.0 0.3807196863200844 0.0 [{I|L}A]SDRH[K{I|L}];[{I|L}A]SD[VG]H[K{I|L}];{[TV]|[{I|L}S]}ADRH[K{I|L}];{[TV]|[{I|L}S]}AD[VG]H[K{I|L}];{[TV]|[{I|L}S]}[KT]HT[RP];[HK]DDK{I|L}[{I|L}A];[HK]W{[RE]|[WV]}[{I|L}A] 6.125;5.1381;4.946;3.9592;1.8038;1.0787;0.58331 -;+;-;-;-;-;- + 188 + 1 2.734 74810.1 1.0 1193 3804 4998 SUDHL4_400M_050219_1,4999 SUDHL4_400M_050219_1,4999,ALSDGVHKI False True ALSDGVHKI 25.144957 470.265399158001 5608504.5 4998.0 ENST00000491175.1_1_3:138340270-138348004:+|nuORF;;nc|ENSG00000158234|Q9NVQ4|FAIM;;nc|ENSG00000158234|Q9NVQ4-2|FAIM;;ENSG00000158234|ENST00000360570|FAIM;;ENST00000470889.5_1_3:138329799-138348004:+|nuORF 4.876697858174642 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5000 25.152 398.0 165460.0 25 0 19672.0 + 39868 VFKEDGQEY 9 101 557.7567465567978 1113.4989401803955 2 557.7569457888603 MULTI CID FTMS 0 0 0 4998 109895.46875 0.7105731616636762 -4 0.0590343475341796 2 Unmodified _VFKEDGQEY_ ENSG00000173674|ENST00000379607|EIF1AX;ENSG00000198692|ENST00000361365|EIF1AY;ENST00000465253.1_1_Y:22737757-22750047:+|nuORF 34.93206674587334 0.1032771302489716 5 EM[DV]{M(Oxidation (M))|F}VEY 8 6 44.373 0.0 0.0 3.985 0.0 0.0 83.07417494941562 0.0 83.07417494941562 0.0 20.15153777800478 0.0 0.0 0 0.7742275032520141 0.0 0.5 0.0 EM[DV]{M(Oxidation (M))|F}VEY 3.985 - 221 1 2.734 53574.8 1.0 1194 3804 4998 SUDHL4_400M_050219_1,5000 SUDHL4_400M_050219_1,5000,VFKEDGQEY True True VFKEDGQEY 25.152088 557.75694578886 815373.1875 4998.0 ENST00000465253.1_1_Y:22737757-22750047:+|nuORF;;ENSG00000173674|ENST00000379607|EIF1AX;;ENSG00000198692|ENST00000361365|EIF1AY 6.66480016708374 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5002 25.159 242.0 367240.0 25 0 86233.0 + 2178 AQAPAQSQF 9 104 474.2330340047701 946.45151507634 2 474.2326843142509 MULTI CID FTMS 0 0 0 5001 148232.4375 0.5530293076136464 -4 0.0430355072021484 1 Unmodified _AQAPAQSQF_ ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP 32.30548876998284 0.1201446275138228 5 [QA]PAA 5 5 24.763 0.0 0.0 2.6164 0.0 0.0 0.0 505.2049690160464 505.2049690160464 7.773109370204452 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7059771852360797 [QA]PAA 2.6164 - 96 1 2.734 73284.9 1.0 1195 3805 5001 SUDHL4_400M_050219_1,5002 SUDHL4_400M_050219_1,5002,AQAPAQSQF True True AQAPAQSQF 25.159149 474.232684314251 1445683.625 5001.0 ENSG00000005339|ENST00000262367|CREBBP;;nc|ENSG00000005339|Q92793-2|CREBBP 3.996684074401856 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5003 25.164 266.0 276640.0 25 0 93715.0 + 16009 ITEGTLRIT 9 85 502.2919539289913 1002.5693549247826 2 502.2826415896416 MULTI CID FTMS 0 0 0 5001 123009.9296875 0.2179628140936136 -11 0.2726669311523437 2 Unmodified _ITEGTLRIT_ REV__ENSG00000183580|ENST00000504595|FBXL7;REV__nc|ENSG00000183580|Q9UJT9-2|FBXL7 7.910154910731844 0.6385446671287552 5 P{[VA]|[{I|L}G]}DVV 6 -1 15.591 0.0 0.0 1.5551 0.0 0.0 404.22758681465 0.0 404.22758681465 0.0 0.9864468880481088 0.0 0.0 0 0.0924778212679485 0.0 0.5 0.0 P{[VA]|[{I|L}G]}DVV 1.5551 - 62 1 2.734 64557.6 1.0 1196 3805 5001 SUDHL4_400M_050219_1,5003 SUDHL4_400M_050219_1,5003,ITEGTLRIT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5005 25.169 109.0 768190.0 25 0 91422.0 + 11707 GLGPPGRSV 9 78 420.2405198103304 838.4664866874607 2 420.2399474978447 MULTI CID FTMS 0 0 0 5004 561253.0625 0.4018470274266707 -10 0.2565670013427734 1 Unmodified _GLGPPGRSV_ ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1 24.99096001346401 0.2132109383330889 5 {[VA]|[{I|L}G]}G 3 6 33.468 0.0 0.0 3.9916 0.0 0.0 0.0 608.3160709982607 608.3160709982607 14.28666248215634 0.0 0.0 0.0 0 1.0 2.0 0.0 0.0 + {[VA]|[{I|L}G]}G 3.9916 + + 81 1 2.734 70375.3 1.0 1197 3806 5004 SUDHL4_400M_050219_1,5005 SUDHL4_400M_050219_1,5005,GLGPPGRSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5006 25.172 172.0 308930.0 25 0 27642.0 + 34764 SQAPAARAF 9 88 459.7432708214137 917.4719887096276 2 459.7436096072197 MULTI CID FTMS 0 0 0 5004 162430.984375 0.9824970337719968 -2 0.0240726470947265 2 Unmodified _SQAPAARAF_ chr19:17537543-17539158|12|29.92|0.06|8.88|+|0|NIBAN3,None|2;chr19:17543433-17546686|45|45.27|0.54|6.38|+|ENST00000599124|NIBAN3,NIBAN3;chr19:17546797-17549455|45|19.44|0.22|6.49|+|ENST00000600519|NIBAN3,NIBAN3;chr19:17546797-17551786|45|44.04|0.49|6.48|+|ENST00000600871|NIBAN3,NIBAN3;chr19:17549527-17553313|46|34.41|0.39|6.48|+|ENST00000601861|NIBAN3,NIBAN3;ENSG00000167483|ENST00000599164|NIBAN3;nc|ENSG00000167483|Q86XR2-2|NIBAN3;nc|ENSG00000167483|Q86XR2-3|NIBAN3;nc|ENSG00000167483|Q86XR2-4|NIBAN3;nc|ENSG00000167483|Q86XR2-5|NIBAN3;nc|ENSG00000167483|Q86XR2-7|NIBAN3;nc|ENSG00000167483|Q86XR2|NIBAN3 29.081581746732265 0.1611639662936252 5 {[QS]|[NT]}A 3 6 35.858 0.0 0.0 3.9084 0.0 0.0 0.0 628.3213899149587 628.3213899149587 17.62665603828445 0.0 0.0 0.0 0 1.0 0.8538719643217619 0.0 0.6861818737241735 + {[QS]|[NT]}A 3.9084 + + 51 1 2.734 46580.0 1.0 1198 3806 5004 SUDHL4_400M_050219_1,5006 SUDHL4_400M_050219_1,5006,SQAPAARAF False True SQAPAARAF 25.172257 459.74360960722 859621.125 5004.0 chr19:17546797-17549455|45|19.44|0.22|6.49|+|ENST00000600519|NIBAN3,NIBAN3;;chr19:17549527-17553313|46|34.41|0.39|6.48|+|ENST00000601861|NIBAN3,NIBAN3;;nc|ENSG00000167483|Q86XR2-3|NIBAN3;;nc|ENSG00000167483|Q86XR2-5|NIBAN3;;nc|ENSG00000167483|Q86XR2-4|NIBAN3;;ENSG00000167483|ENST00000599164|NIBAN3;;chr19:17546797-17551786|45|44.04|0.49|6.48|+|ENST00000600871|NIBAN3,NIBAN3;;nc|ENSG00000167483|Q86XR2|NIBAN3;;nc|ENSG00000167483|Q86XR2-2|NIBAN3;;chr19:17537543-17539158|12|29.92|0.06|8.88|+|0|NIBAN3,None|2;;nc|ENSG00000167483|Q86XR2-7|NIBAN3;;chr19:17543433-17546686|45|45.27|0.54|6.38|+|ENST00000599124|NIBAN3,NIBAN3 2.169447402159373 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5007 25.186 800.0 105110.0 25 0 7806.4 31447 RPQSNWKESAN 11 113 658.8210046549852 1315.6274563767704 2 658.8199951052666 MULTI CID FTMS 0 0 0 5004 81942.4765625 0.4449401356849248 -5 0.055002212524414 3 Unmodified _RPQSNWKESAN_ ENSG00000197077|ENST00000358431|KIAA1671 33.4449034751529 0.3133739643825231 5 [DP][{M(Oxidation (M))|F}V][RV]PSQSAN 12 8 + 87.665 0.0 0.0 6.6634 6.6634 83.149 0.0 0.0 0.0 0.9632670493039086 9.098233696509126 0.9632670493039086 0.9632670493039086 0 1.424742501084005 1.0969100130080565 2.1237125054200234 0.6139829889124311 [DP][{M(Oxidation (M))|F}V][RV]PSQSAN;{[SA]|[TG]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[RV]PSQSAN;{[SA]|[TG]}{[WN]|[YH]}[RV]PSQSAN;{[TV]|[{I|L}S]}EE[RV]PSQSAN;{[QS]|[NT]}{[QD]|[EN]|[WG]|[KD]|[RS]}[RV]PSQSAN;[DP][{M(Oxidation (M))|F}V][RV]PSQASN;{[SA]|[TG]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[RV]PSQASN;{[SA]|[TG]}GPS[K{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QSAN;{[SA]|[TG]}{[WN]|[YH]}[RV]PSQASN;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QQPSQSAN 6.6634;6.5902;6.3345;6.0719;5.9431;5.8829;5.8097;5.6638;5.554;5.4804 -;-;-;-;-;-;-;-;-;- 2316 1 2.734 68035.8 0.5199999809265137 1199 3806 5004 SUDHL4_400M_050219_1,5007 SUDHL4_400M_050219_1,5007,RPQSNWKESAN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5009 25.202 800.0 24358.0 25 0 1481.1 -1 0 43 930.59945305064 3718.36870633616 4 930.8520385622978 MULTI CID FTMS 0 0 0 -1 0 1 5 C 1 -1 6.9897 0.0 0.0 0.18798 0.0 0.0 2486.396734755885 1125.909651149882 3612.306385905768 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.18798 - 7 + 1 2.734 25763.3 0.4000000059604645 1200 3807 5008 SUDHL4_400M_050219_1,5009 SUDHL4_400M_050219_1,5009, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5010 25.208 287.0 260460.0 25 0 31904.0 -1 TVSCSKMSSI 10 97 529.7475747220768 1057.4805965109535 2 529.7473632693291 MULTI CID FTMS 0 0 0 5008 135238.359375 0.2103089766994724 -9 0.197549819946289 2 Oxidation (M) _TVSCSKM(Oxidation (M))SSI_ ENSG00000134852|ENST00000513440|CLOCK 24.020572477871973 0.4289996903560794 5 {[TV]|[{I|L}S]}S{[QN]|[E{I|L}]|[KN]}{[HG]|PP}S[DN] 10 -1 + 28.284 0.0 0.0 2.6746 2.6746 71.999 0.0 0.0 0.0 2.119967063253636 2.65601691149298 2.119967063253636 0.3246091534035145 0 0.0 1.3979400086720375 1.5941876774005248 0.0 {[TV]|[{I|L}S]}S{[QN]|[E{I|L}]|[KN]}{[HG]|PP}S[DN];{[TV]|[{I|L}S]}SG[HK]NS[DN];{[TV]|[{I|L}S]}SG[KG]{[HG]|PP}S[DN];[DN]S{[NV]|[RG]}[Y{M(Oxidation (M))|F}]S{I|L};[C(Carbamidomethyl (C))S]S{[ET]|[MV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L};{[TV]|[{I|L}S]}SG[HK]GGS[DN];{[TV]|[{I|L}S]}S{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))N][HV];{[CA]|SS}{I|L}{[QN]|[E{I|L}]|[KN]}{[HG]|PP}S[DN];{[CA]|SS}{I|L}G[HK]NS[DN];{[CA]|SS}{I|L}G[KG]{[HG]|PP}S[DN] 2.6746;2.6439;2.6355;2.0016;1.7923;1.7773;1.1929;1.1174;1.0867;1.0783 -;-;-;-;-;-;-;-;-;- 373 1 2.734 62061.7 1.0 1201 3807 5008 SUDHL4_400M_050219_1,5010 SUDHL4_400M_050219_1,5010,TVSCSKMSSI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5011 25.213 309.0 283070.0 25 0 20291.0 + 17125 KLGPDDPNV 9 105 477.748044243779 953.481535554358 2 477.7482787966728 MULTI CID FTMS 0 0 0 5008 132101.140625 0.7290896892271685 -4 0.0499343872070312 3 Unmodified _KLGPDDPNV_ ENSG00000126214|ENST00000334553|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866|KLC1 27.628801355627647 0.1796483985696185 5 [DP]DG[K{I|L}]PNV 9 6 + 28.417 0.0 0.0 2.9803 2.9803 77.534 0.0 0.0 0.0 8.09439983606077 11.249927856786584 8.09439983606077 4.393326938302625 0 0.809894379144197 1.0457574905606752 0.6549471895720985 0.0 [DP]DG[K{I|L}]PNV;[DP]GD[K{I|L}]PNV;[DP]V[KA]DPNV;[DP]G[K{I|L}]DPNV;[PS]{M(Oxidation (M))|F}Y{I|L}[QT]V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PY{I|L}[QT]V;[DP]V[KA]YYV 2.9803;2.5196;2.0076;1.5469;1.0213;0.71587;0.39988 -;-;-;-;-;-;- 215 1 2.734 70997.7 1.0 1202 3807 5008 SUDHL4_400M_050219_1,5011 SUDHL4_400M_050219_1,5011,KLGPDDPNV False True KLGPDDPNV 25.213371 477.748278796673 883620.625 5008.0 nc|ENSG00000126214|Q07866-10|KLC1;;nc|ENSG00000126214|Q07866-2|KLC1;;nc|ENSG00000126214|Q07866-6|KLC1;;nc|ENSG00000126214|Q07866-5|KLC1;;nc|ENSG00000126214|Q07866-8|KLC1;;ENSG00000126214|ENST00000334553|KLC1;;nc|ENSG00000126214|Q07866-3|KLC1;;nc|ENSG00000126214|Q07866-7|KLC1;;nc|ENSG00000126214|Q07866|KLC1;;nc|ENSG00000126214|Q07866-4|KLC1 4.933661778767903 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5013 25.219 127.0 366650.0 25 0 27060.0 + 38345 TQMPDPKTF 9 91 540.7567583634516 1079.498963793703 2 540.7556640505791 MULTI CID FTMS 0 0 0 5012 319101.0 0.7431360633678123 -4 0.0733833312988281 1 Oxidation (M) _TQM(Oxidation (M))PDPKTF_ ENSG00000120963|ENST00000311212|ZNF706 41.95555342248728 0.0647214845423414 5 [KP]T[DV]Y{M(Oxidation (M))|F}NP 9 8 [KP]T[DV]Y + + 30.201 0.29046 0.041296 2.7976 2.7976 53.837 0.0 0.0 0.0 0.0 18.94153536733304 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.75 [KP]T[DV]Y{M(Oxidation (M))|F}NP 2.7976 - 178 + 1 2.734 41292.3 1.0 1203 3808 5012 SUDHL4_400M_050219_1,5013 SUDHL4_400M_050219_1,5013,TQMPDPKTF True False TQMPDPKTF 25.218529 540.755664050579 8286618.5 5012.0 ENSG00000120963|ENST00000311212|ZNF706 8.042577107747396 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5014 25.222 169.0 584040.0 25 0 173260.0 + 33573 SIMKWNRER 9 75 407.2167449072899 1218.6284053220695 3 407.2157470583916 MULTI CID FTMS 0 0 0 5012 194672.65625 0.6901668868795586 -2 0.0493106842041015 2 Unmodified _SIMKWNRER_ chr19:19526260-19526432|23|184.0|0.0|24.13|+|1|NDUFA13,None|1;ENSG00000186010|ENST00000507754|NDUFA13;ENST00000511584.2_1_19:19627047-19637070:+|nuORF;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;nc|ENSG00000186010|Q9P0J0-2|NDUFA13 26.268140514670165 0.1969607489560049 5 {[TV]|[{I|L}S]}MKPA 6 5 52.937 0.0 0.0 4.344 0.0 0.0 0.0 588.2536132432601 588.2536132432601 36.73902187720806 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.8494850021680094 {[TV]|[{I|L}S]}MKPA 4.344 - 114 + 1 2.734 82630.2 1.0 1204 3808 5012 SUDHL4_400M_050219_1,5014 SUDHL4_400M_050219_1,5014,SIMKWNRER False True SIMKWNRER 25.221827 407.215747058392 1442652.0 5012.0 ENST00000511584.2_1_19:19627047-19637070:+|nuORF;;ENSG00000186010|ENST00000507754|NDUFA13;;chr19:19526260-19526432|23|184.0|0.0|24.13|+|1|NDUFA13,None|1;;ENST00000586674.1_1_19:19627047-19643527:+|nuORF;;nc|ENSG00000186010|Q9P0J0-2|NDUFA13 4.645219643910726 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5015 25.227 290.0 211840.0 25 0 20292.0 + + 25584 FNDGSSREL 9 92 512.237210374292 0 512.2371703982353 PEAK CID FTMS 0 0 0 5012 120519.390625 0.148154080500336 -10 0.2248458862304687 3 Unmodified _NFFQGWPQ_ ENSG00000074319|ENST00000251968|TSG101;ENST00000545247.6_1_11:18505612-18548363:-|nuORF 14.581692164780916 0.4900557725783909 5 NDGP 4 -1 23.8 0.0 0.0 2.3277 0.0 0.0 146.0696223093277 490.22806864048937 636.297690949817 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 NDGP 2.3277 - 33 + 1 2.734 50800.6 1.0 1205 3808 5012 SUDHL4_400M_050219_1,5015 SUDHL4_400M_050219_1,5015,NFFQGWPQ False False FNDGSSREL 25.22715 512.237170398235 1010777.4375 5012.0 ENSG00000074319|ENST00000251968|TSG101;;ENST00000545247.6_1_11:18505612-18548363:-|nuORF 0.9791072954734168 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5016 25.233 344.0 260240.0 25 0 44107.0 + -1 LSDGVHKI 8 83 434.8820598697517 0 434.8820983767509 PEAK CID FTMS 0 0 0 5012 105506.984375 0.7614339178989062 42 -0.911346435546875 4 2 Oxidation (M) _M(Oxidation (M))PM(Oxidation (M))RSPSKLSH_ ENST00000491175.1_1_3:138340270-138348004:+|nuORF;nc|ENSG00000158234|Q9NVQ4|FAIM;nc|ENSG00000158234|Q9NVQ4-2|FAIM;ENSG00000158234|ENST00000360570|FAIM;ENST00000470889.5_1_3:138329799-138348004:+|nuORF 6.623454094837244 0.4761840153648597 5 SDRH 4 -1 23.22 0.0 0.0 2.6758 0.0 0.0 113.3526577541208 256.16657434635005 369.5192321004709 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 SDRH 2.6758 - 69 + 1 2.734 79330.2 1.0 1206 3808 5012 SUDHL4_400M_050219_1,5016 SUDHL4_400M_050219_1,5016,MPMRSPSKLSH False False LSDGVHKI 25.233367 434.882098376751 236943.0 5012.0 ENST00000491175.1_1_3:138340270-138348004:+|nuORF;;nc|ENSG00000158234|Q9NVQ4|FAIM;;nc|ENSG00000158234|Q9NVQ4-2|FAIM;;ENSG00000158234|ENST00000360570|FAIM;;ENST00000470889.5_1_3:138329799-138348004:+|nuORF 3.936785618464152 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5018 25.24 213.0 366400.0 25 0 101330.0 + 12160 GQNAQTMAY 9 98 492.21627936434805 982.418005795496 2 492.2162658572197 MULTI CID FTMS 0 0 0 5017 265530.3125 0.4241549218717553 3 -0.0275611877441406 1 Unmodified _GQNAQTMAY_ ENSG00000009307|ENST00000358528|CSDE1;ENST00000483030.1_1_1:115263111-115268953:-|nuORF;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 34.10243960390752 0.1078313939113124 5 {[QG]|[NA]}NA[QT]MAY 9 0 {[QG]|[NA]}NA[QT]M + + 20.969 16.247 2.2247 2.1344 2.1344 53.036 0.0 0.0 0.0 0.0 -0.9202342572982792 -0.9202342572982792 0.0 0 0.0 0.0 0.0 0.0 + + {[QG]|[NA]}NA[QT]MAY 2.1344 + + 209 + 1 2.734 68023.9 1.0 1207 3809 5017 SUDHL4_400M_050219_1,5018 SUDHL4_400M_050219_1,5018,GQNAQTMAY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5019 25.244 211.0 246000.0 25 0 36185.0 + 29107 QEQYEFGVP 9 101 548.7491209834806 1095.483689033761 2 548.7491943240166 MULTI CID FTMS 0 0 0 5017 200258.859375 0.5120080469914386 8 -0.1260643005371093 2 Unmodified _QEQYEFGVP_ REV__ENSG00000215182|ENST00000621226|MUC5AC 19.256988751693697 0.3154191944385105 5 EQNE 4 -1 29.285 0.0 0.0 2.6732 0.0 0.0 356.2066637425485 236.06801782779533 592.2746815703439 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.7742275032520141 EQNE 2.6732 - 360 + 1 2.734 44325.1 1.0 1208 3809 5017 SUDHL4_400M_050219_1,5019 SUDHL4_400M_050219_1,5019,QEQYEFGVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5022 25.254 228.0 595990.0 25 0 27263.0 + 12559 GVHTGTAL 8 131 378.2054602154909 754.3963674977819 2 378.2046386599541 MULTI CID FTMS 0 0 0 5021 233664.765625 0.9139064182688575 -2 0.0143280029296875 1 Unmodified _GVHTGTAL_ REV__ENSG00000140395|ENST00000267973|SKIC8 10.183394434864962 0.7604730176254005 5 SDGVHK{I|L} 7 -1 + 63.272 0.0 0.0 8.3871 8.3871 86.827 0.0 0.0 0.0 33.309932190414244 1.655669311369934 1.655669311369934 1.655669311369934 0 1.0994850021680094 1.6989700043360187 0.0 0.2134679910804404 SDGVHK{I|L};SDGVH{I|L}K;{I|L}[YT][{M(Oxidation (M))|F}V]{I|L};S[{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K;{I|L}[YG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K 8.3871;8.1677;1.6715;0.69471;0.42576 -;-;-;-;- 128 + 1 2.734 108541.2 1.0 1209 3811 5021 SUDHL4_400M_050219_1,5022 SUDHL4_400M_050219_1,5022,GVHTGTAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5023 25.261 363.0 191300.0 25 0 29136.0 -1 0 55 1123.368414396331 2244.722275859462 2 1123.367236316204 MULTI CID FTMS 0 0 0 5021 227926.4375 0.803372389215915 -5 0.0835723876953125 2 5 N 1 -1 6.5938 0.0 0.0 0.29375 0.0 0.0 1705.5355825994995 422.12998377017817 2127.665566369678 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 N 0.29375 - 23 + 1 2.734 59171.1 1.0 1210 3811 5021 SUDHL4_400M_050219_1,5023 SUDHL4_400M_050219_1,5023, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5025 25.266 92.0 502280.0 25 0 71136.0 + 9772 FNDPNAKEM 9 84 533.2369622656316 1064.4593715980632 2 533.2372314333916 MULTI CID FTMS 0 0 0 5024 383320.65625 0.05786491862288 13 -0.3020286560058594 1 Unmodified _FNDPNAKEM_ ENSG00000056097|ENST00000265069|ZFR 31.26834338654808 0.1333407332142048 5 RD{[QD]|[EN]|[WG]|[KD]|[RS]} 4 6 29.922 0.0 0.0 2.811 0.0 0.0 532.2074317560695 0.0 532.2074317560695 0.0 15.94212497064703 0.0 0.0 0 1.0 0.0 0.0 0.7614393726401688 RD{[QD]|[EN]|[WG]|[KD]|[RS]} 2.811 - 195 + 1 2.734 40969.7 1.0 1211 3812 5024 SUDHL4_400M_050219_1,5025 SUDHL4_400M_050219_1,5025,FNDPNAKEM False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5026 25.279 800.0 179090.0 25 0 11811.0 + 17122 KLGPAPKTL 9 173 462.7974420212957 923.5803311093912 2 462.7970764040947 MULTI CID FTMS 0 0 0 5024 121647.96875 0.2501478466060697 19 -0.4485397338867187 2 Unmodified _KLGPAPKTL_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 53.40400417844725 0.0329064971918313 5 GP[Q{I|L}]PKT{I|L} 8 4 41.252 0.0 0.0 4.4665 0.0 0.0 71.07426650215 0.0 71.07426650215 0.0 28.86098718026615 0.0 0.0 0 1.4124379954164592 0.0 0.3807196863200844 0.0 GP[Q{I|L}]PKT{I|L} 4.4665 - 243 1 2.734 112996.5 0.5 1212 3812 5024 SUDHL4_400M_050219_1,5026 SUDHL4_400M_050219_1,5026,KLGPAPKTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5028 25.284 55.0 956050.0 25 0 193490.0 + 14743 ILDAGGHNV 9 88 448.23537367739385 894.4561944215877 2 448.2351867556572 MULTI CID FTMS 0 0 0 5027 884796.8125 0.2883275985870984 8 -0.2354717254638672 1 Unmodified _ILDAGGHNV_ ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1 27.628801355627647 0.1796483985696185 5 {I|L}{I|L}DANH{[NV]|[RG]} 8 2 + 64.43 0.0 0.0 7.2032 7.2032 93.691 0.0 0.0 0.0 42.82583442123752 3.098943791441968 3.098943791441968 9.262137858390815 0 0.805462187404089 2.0 0.0 0.0 {I|L}{I|L}DANH{[NV]|[RG]};{I|L}{I|L}DAGGH{[NV]|[RG]} 7.2032;6.1677 -;+ + 169 + 1 2.734 45297.9 1.0 1213 3813 5027 SUDHL4_400M_050219_1,5028 SUDHL4_400M_050219_1,5028,ILDAGGHNV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5029 25.286 73.0 817820.0 25 0 121080.0 -1 RMLPHAPGV 9 73 497.2686842163741 992.5228154995484 2 497.2686950564384 MULTI CID FTMS 0 0 0 5027 700005.125 0.9443737574619736 3 -0.0515727996826171 2 Oxidation (M) _RM(Oxidation (M))LPHAPGV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 16.942295170755138 0.3780752226737986 5 [TA]VA 4 -1 22.747 0.0 0.0 2.2918 0.0 0.0 0.0 647.3090758357389 647.3090758357389 10.528419686577806 0.0 0.0 0.0 0 1.0 0.0 0.5 0.0 [TA]VA 2.2918 - 63 1 2.734 50966.1 1.0 1214 3813 5027 SUDHL4_400M_050219_1,5029 SUDHL4_400M_050219_1,5029,RMLPHAPGV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5030 25.288 115.0 507160.0 25 0 77715.0 + 36667 TAYPGQTQY 9 88 514.7381044117641 1027.461655890328 2 514.7377197146416 MULTI CID FTMS 0 0 0 5027 405810.25 0.3167408594656967 -6 0.0932197570800781 3 Unmodified _TAYPGQTQY_ ENSG00000158161|ENST00000373871|EYA3;ENST00000471498.5_1_1:28324859-28384546:-|nuORF;nc|ENSG00000158161|Q99504-3|EYA3;nc|ENSG00000158161|Q99504-4|EYA3;nc|ENSG00000158161|Q99504-5|EYA3 15.847184025352805 0.4077185912009129 5 [TA]GQPGY 7 4 24.69 0.0 0.0 2.403 0.0 0.0 0.0 350.13710690034685 350.13710690034685 10.085645823361844 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2742275032520141 0.0 [TA]GQPGY 2.403 - 347 1 2.734 49597.9 1.0 1215 3813 5027 SUDHL4_400M_050219_1,5030 SUDHL4_400M_050219_1,5030,TAYPGQTQY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5031 25.302 800.0 198590.0 25 0 8280.7 -1 RPCPWNYGQF 10 121 662.7976308218134 1323.5807087104267 2 662.7991210818291 MULTI CID FTMS 0 0 0 5027 193670.734375 0.805054054550836 -2 0.0316619873046875 4 Carbamidomethyl (C) _RPC(Carbamidomethyl (C))PWNYGQF_ ENSG00000104055|ENST00000220420|TGM5;nc|ENSG00000104055|O43548-2|TGM5 32.30548876998284 0.2428506522065767 5 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F} 13 -1 + 122.25 0.0 0.0 9.2362 9.2362 85.744 0.0 0.0 0.0 4.924843744914611 16.642078980768062 4.924843744914611 0.3388697050907296 0 0.6549471895720984 1.3010299956639813 0.6139829889124311 2.7034021960761265 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GQ{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AGG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F} 9.2362;9.2106;8.8641;8.8427;8.8385;8.615;8.5894;8.5507;8.5507;8.5507 -;-;-;-;-;-;-;-;-;- 11083 1 2.734 115590.7 0.7799999713897705 1216 3813 5027 SUDHL4_400M_050219_1,5031 SUDHL4_400M_050219_1,5031,RPCPWNYGQF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5034 25.31 95.0 665380.0 25 0 114650.0 + 16179 IVDRTTTVV 9 81 502.2919539289913 1002.5693549247826 2 502.2939636111259 MULTI CID FTMS 0 0 0 5033 456526.0625 0.808924170124849 -1 0.0038509368896484 1 Unmodified _IVDRTTTVV_ ENSG00000115902|ENST00000234256|SLC1A4;nc|ENSG00000115902|P43007-2|SLC1A4 36.12702656103203 0.0967173616627612 5 [{I|L}V]{[C(Carbamidomethyl (C))E]|[WC]}[TA]{I|L}VV 9 4 + 63.891 0.0 0.0 6.3728 6.3728 86.22 0.0 0.0 0.0 20.258396522653683 42.43764654750095 20.258396522653683 4.190840781556204 0 1.2302046884880935 2.0 1.6237125054200234 0.0 [{I|L}V]{[C(Carbamidomethyl (C))E]|[WC]}[TA]{I|L}VV;[{I|L}V][DG]V[R{M(Oxidation (M))|F}]VV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TA]{I|L}VV 6.3728;5.9547;3.6979 -;-;- 96 1 2.734 57716.2 1.0 1217 3815 5033 SUDHL4_400M_050219_1,5034 SUDHL4_400M_050219_1,5034,IVDRTTTVV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5035 25.317 379.0 348730.0 25 0 46168.0 + 45246 YSAPGRDL 8 112 439.7222203058305 877.429887678461 2 439.7218505740166 MULTI CID FTMS 0 0 0 5033 240244.453125 0.1974076779390902 -4 0.0580558776855468 2 Unmodified _YSAPGRDL_ ENSG00000008018|ENST00000262193|PSMB1 24.020572477871973 0.5389365498350341 5 YSAP 4 4 49.24 0.0 0.0 5.6119 0.0 0.0 0.0 456.22151686785065 456.22151686785065 38.644315106446015 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + YSAP 5.6119 + + 139 + 1 2.734 105789.9 1.0 1218 3815 5033 SUDHL4_400M_050219_1,5035 SUDHL4_400M_050219_1,5035,YSAPGRDL False True YSAPGRDL 25.317281 439.721850574017 11893966.0 5033.0 ENSG00000008018|ENST00000262193|PSMB1 6.1025973955790205 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5036 25.331 800.0 171830.0 25 0 16736.0 -1 VLFVEDGKME 10 133 591.7903171271319 1181.5660813210636 2 591.7894775271416 MULTI CID FTMS 0 0 0 5033 111511.3203125 0.1365800090436795 -18 0.3594245910644531 3 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 28.49450938151212 0.328477364964909 5 EGK[{M(Oxidation (M))|F}E] 5 -1 36.95 0.0 0.0 3.1272 0.0 0.0 573.3372669904312 0.0 573.3372669904312 0.0 11.285990926982516 0.0 0.0 0 1.274227503252014 0.0 0.3494850021680094 0.0 EGK[{M(Oxidation (M))|F}E] 3.1272 - 139 1 2.734 109072.7 0.7799999713897705 1219 3815 5033 SUDHL4_400M_050219_1,5036 SUDHL4_400M_050219_1,5036,VLFVEDGKME False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5038 25.336 74.0 797230.0 25 0 81819.0 + -1 LLPCCPAAE 9 78 487.2274198047775 972.440286676355 2 487.2279540896416 MULTI CID FTMS 0 0 0 5037 608995.0 0.8350187670808973 -3 0.0515727996826171 1 Carbamidomethyl (C) _LLPC(Carbamidomethyl (C))CPAAE_ REV__ENSG00000128159|ENST00000248846|TUBGCP6;REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF;REV__nc|ENSG00000128159|Q96RT7-2|TUBGCP6;REV__nc|ENSG00000128159|Q96RT7-3|TUBGCP6 7.910154910731844 0.6385446671287552 5 {I|L}{I|L}PP 4 -1 40.445 0.0 0.0 4.1592 0.0 0.0 0.0 549.145417514362 549.145417514362 26.95046257204389 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}PP 4.1592 - 42 + 1 2.734 48759.3 1.0 1220 3816 5037 SUDHL4_400M_050219_1,5038 SUDHL4_400M_050219_1,5038,LLPCCPAAE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5039 25.339 172.0 384060.0 25 0 43391.0 10385 FSSLSSGAL 9 92 434.72298167855297 867.431410423906 2 434.7240173220634 MULTI CID FTMS 0 0 0 5037 139559.78125 0.4669555099627829 -3 0.0515727996826171 2 Unmodified _FSSLSSGAL_ ENSG00000144824|ENST00000431670|PHLDB2;nc|ENSG00000144824|Q86SQ0-2|PHLDB2;nc|ENSG00000144824|Q86SQ0-3|PHLDB2 26.88365393820708 0.1891292719743517 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[TV]|[{I|L}S]}[KA]SE 8 5 + 29.001 0.0 0.0 3.3434 3.3434 80.786 0.0 0.0 0.0 8.239087409443187 8.239087409443187 8.239087409443187 8.239087409443187 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[TV]|[{I|L}S]}[KA]SE;{M(Oxidation (M))|F}S[KA]{[TV]|[{I|L}S]}C{I|L};{M(Oxidation (M))|F}{[WT]|[RM]}{[CA]|SS}K{I|L};[KG][{M(Oxidation (M))|F}T]{[TV]|[{I|L}S]}SE;[HK][PA]{[WT]|[RM]}E;[KG][{M(Oxidation (M))|F}T]{[WT]|[RM]}E;[TA][YV][KA]SE 3.3434;2.3935;1.4928;1.2214;0.88998;0.82945;0.69067 -;-;-;-;-;-;- 89 1 2.734 55601.9 1.0 1221 3816 5037 SUDHL4_400M_050219_1,5039 SUDHL4_400M_050219_1,5039,FSSLSSGAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5040 25.346 342.0 137490.0 25 0 7121.3 -1 CVLKEKCMD 9 95 542.7452528545858 1083.4759527759716 2 542.7455932497978 MULTI CID FTMS 0 0 0 5037 106717.8671875 0.8179752812531869 -1 0.0251789093017578 3 Oxidation (M) _CVLKEKCM(Oxidation (M))D_ ENSG00000134352|ENST00000381298|IL6ST;nc|ENSG00000134352|P40189-2|IL6ST;nc|ENSG00000134352|P40189-3|IL6ST 13.90604991867851 0.4602628045680013 5 {[DS]|[MA]|[CV]|TT}{I|L} 3 -1 34.265 0.0 0.0 3.1625 0.0 0.0 0.0 765.2932833307249 765.2932833307249 19.1219860336234 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}{I|L} 3.1625 + + 91 + 1 2.734 41613.2 1.0 1222 3816 5037 SUDHL4_400M_050219_1,5040 SUDHL4_400M_050219_1,5040,CVLKEKCMD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5041 25.355 527.0 149130.0 25 0 9941.0 43252 WEELRRAGT 9 124 559.2895825399653 1116.5646121467305 2 559.2906371951103 MULTI CID FTMS 0 0 0 5037 86355.1328125 0.93209740736184 -2 0.0290298461914062 4 Unmodified _WEELRRAGT_ ENST00000436639.6_1_6:109415651-109416020:-|nuORF 10.823927491677226 0.5436922275383211 5 QSPRV[MD]PP 9 9 31.231 0.0 0.0 2.7971 0.0 0.0 91.05912179279046 0.0 91.05912179279046 0.0 23.44463385052117 0.0 0.0 0 0.5138793319624578 0.0 0.7742275032520141 0.4247425010840047 QSPRV[MD]PP 2.7971 - 161 + 1 2.734 64920.3 1.0 1223 3816 5037 SUDHL4_400M_050219_1,5041 SUDHL4_400M_050219_1,5041,WEELRRAGT False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5042 25.36 259.0 292140.0 25 0 32129.0 -1 0 94 507.2443311064037 506.23705463980366 1 507.2444030642509 MULTI CID FTMS 0 0 0 5037 144279.1875 0.4550106584592095 -4 0.0700016021728515 5 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EV 4 -1 + 51.075 0.0 0.0 10.089 10.089 87.575 0.0 0.0 0.0 1.5227008355092266 1.5227008355092266 1.5227008355092266 1.5227008355092266 0 0.4392404878284264 2.0 0.3494850021680094 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EV;PYEV;[YE]PV;VEPY;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V 10.089;9.7883;7.7349;5.1673;1.6173 -;-;-;-;- 39 1 2.734 64390.9 1.0 1224 3816 5037 SUDHL4_400M_050219_1,5042 SUDHL4_400M_050219_1,5042, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5044 25.373 561.0 183830.0 25 0 54612.0 -1 0 104 571.3208387624824 570.3135622958823 1 572.3236572146416 MULTI CID FTMS 0 0 0 5043 100555.703125 0.4100872609468074 -16 0.2503108978271484 1 5 Y 1 -1 10.485 0.0 0.0 1.8384 0.0 0.0 389.2394941579901 0.0 389.2394941579901 0.0 1.2763625255165325 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.8384 - 38 + 1 2.723 84259.4 1.0 1225 3817 5043 SUDHL4_400M_050219_1,5044 SUDHL4_400M_050219_1,5044, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5045 25.378 267.0 192320.0 25 0 24739.0 + 2557 ASFFRARQTLY 11 100 453.908640015033 1358.7040906452992 3 453.9073974490166 MULTI CID FTMS 0 0 0 5043 125379.1328125 1.0 0 0.0 2 Unmodified _ASFFRARQTLY_ REV__ENSG00000179292|ENST00000327259|TMEM151A 4.406150317652783 0.8543594311449257 5 {[SA]|[TG]}TA 4 -1 32.263 0.0 0.0 2.3745 0.0 0.0 0.0 1025.5292835815164 1025.5292835815164 14.51544993495972 0.0 0.0 0.0 0 0.3054621874040891 1.3010299956639813 0.0 0.0 {[SA]|[TG]}TA 2.3745 - 126 + 1 2.723 45953.0 1.0 1226 3817 5043 SUDHL4_400M_050219_1,5045 SUDHL4_400M_050219_1,5045,ASFFRARQTLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5046 25.38 102.0 557190.0 25 0 75701.0 + 31582 RQPPSTTTF 9 92 517.7672135746557 1033.5198742161112 2 517.7668334841728 MULTI CID FTMS 0 0 0 5043 419754.71875 0.7290236284148853 -4 0.0800743103027343 3 Unmodified _RQPPSTTTF_ nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1 47.74868867922204 0.0453060283459952 5 TTT{M(Oxidation (M))|F} 4 5 44.201 0.0 0.0 4.2767 0.0 0.0 565.3000355451187 0.0 565.3000355451187 0.0 22.90648332085123 0.0 0.0 0 1.0 0.0 1.305462187404089 0.0 + TTT{M(Oxidation (M))|F} 4.2767 + + 257 1 2.723 48295.0 1.0 1227 3817 5043 SUDHL4_400M_050219_1,5046 SUDHL4_400M_050219_1,5046,RQPPSTTTF True True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 5047 25.385 230.0 404430.0 25 0 35932.0 28267 PRGGAFGA 8 126 366.6931421137632 731.3717312943264 2 367.1963989138603 MULTI CID FTMS 0 0 0 5043 200866.5 0.6653297403178937 10 -0.2363739013671875 4 Unmodified _PRGGAFGA_ ENST00000417584.6_1_1:182357843-182360450:-|nuORF 2.577480529830294 0.808687252328423 5 S{I|L}G[KC]PQ 7 7 + 49.338 0.0 0.0 6.746 6.746 88.974 0.0 0.0 0.0 34.56206238622704 4.016091842459915 4.016091842459915 6.320232147054057 0 0.2134679910804404 1.6989700043360187 0.0 0.6549471895720985 S{I|L}G[KC]PQ;S{I|L}[C(Carbamidomethyl (C))K]PQ;S{I|L}G[WR]N;SG{I|L}[KC]PQ;SGC[K{I|L}]PQ;SG{I|L}[WR]N;SC(Carbamidomethyl (C))[K{I|L}]PQ;[EP][KQ][KC] 6.746;5.8818;5.5328;3.7195;2.6556;2.5063;2.203;1.3599 -;-;-;-;-;-;-;- 124 + 1 2.723 77686.6 1.0 1228 3817 5043 SUDHL4_400M_050219_1,5047 SUDHL4_400M_050219_1,5047,PRGGAFGA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5049 25.391 208.0 356550.0 25 0 52445.0 + 35493 STMSTNGIPR 10 101 532.2633045499663 1062.5120561667325 2 532.2639037966728 MULTI CID FTMS 0 0 0 5048 175975.734375 0.0058814680128017 26 -0.6068305969238281 1 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 28.49450938151212 0.328477364964909 5 {[MG]|[TS]}MSTNG{I|L}RP 10 2 + 46.781 0.0 0.0 4.4028 4.4028 84.53 0.0 0.0 0.0 34.73239577921485 11.136218907515314 11.136218907515314 9.164539485499256 0 0.5 0.0 0.0 0.2887254899964357 {[MG]|[TS]}MSTNG{I|L}RP;{[MG]|[TS]}MSTGGG{I|L}RP;{[MG]|[TS]}MSTNGR{I|L}P;{[MG]|[TS]}MSTGGGR{I|L}P;{[MG]|[TS]}[VS][C(Carbamidomethyl (C))S]G{I|L}RP;{[MG]|[TS]}MS[{M(Oxidation (M))|F}V]R[HV];{[MG]|[TS]}M[{I|L}V][RN]GW;{[MG]|[TS]}[VS][C(Carbamidomethyl (C))S]GR{I|L}P;{[MG]|[TS]}MS[{M(Oxidation (M))|F}V][H{I|L}]AA;{[MG]|[TS]}MS[{M(Oxidation (M))|F}V][VG][HV] 4.4028;3.5403;3.233;2.3705;1.952;1.6693;0.95436;0.7822;0.61129;0.47376 -;-;-;-;-;-;-;-;-;- 227 + 1 2.723 63578.8 1.0 1229 3818 5048 SUDHL4_400M_050219_1,5049 SUDHL4_400M_050219_1,5049,STMSTNGIPR False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5050 25.4 498.0 183120.0 25 0 14974.0 + 12733 GVMPSHFSR 9 119 509.2502913936645 1016.4860298541288 2 509.2505981326103 MULTI CID FTMS 0 0 0 5048 103657.2890625 0.5315335912401835 -6 0.1234779357910156 2 Unmodified _GVMPSHFSR_ ENSG00000105372|ENST00000598742|RPS19 28.49450938151212 0.1686335738423394 5 [VG]MPSH{M(Oxidation (M))|F}SR 9 0 + 53.95 0.0 0.0 5.3075 5.3075 81.45 0.0 0.0 0.0 17.646684060270523 2.552725051033057 2.552725051033057 2.552725051033057 0 0.4247425010840047 1.5228787452803376 0.3807196863200844 0.4247425010840047 + + [VG]MPSH{M(Oxidation (M))|F}SR;[VG]MPSH{M(Oxidation (M))|F}RS;[VG]MPSH{[QV]|[N{I|L}]|[RA]|[KV]}Y;[VG]MP[Q{I|L}]{[C(Carbamidomethyl (C))G]|[NC]}R;R{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[SA]|[TG]}{M(Oxidation (M))|F}SR;R[WE]H{[QV]|[N{I|L}]|[RA]|[KV]}Y;R{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[SA]|[TG]}{M(Oxidation (M))|F}RS 5.3075;5.0563;4.6397;3.4527;0.53613;0.36724;0.285 +;-;-;-;-;-;- + 246 + 1 2.723 74681.6 1.0 1230 3818 5048 SUDHL4_400M_050219_1,5050 SUDHL4_400M_050219_1,5050,GVMPSHFSR False True GVMPSHFSR 25.399629 509.25059813261 1183912.625 5048.0 ENSG00000105372|ENST00000598742|RPS19 8.60247532526652 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5051 25.411 654.0 202530.0 25 0 27613.0 13529 HNYLFLAG 8 128 467.74142270996856 933.4682924867373 2 467.7411071658134 MULTI CID FTMS 0 0 0 5048 121413.9609375 0.721030741239337 -2 0.053476333618164 3 Unmodified _HNYLFLAG_ ENSG00000130487|ENST00000648057|KLHDC7B;nc|ENSG00000130487|Q96G42|KLHDC7B 26.34127834903884 0.4900704351052977 5 {[VA]|[{I|L}G]}{[WN]|[YH]}G{M(Oxidation (M))|F}{I|L}Q 8 6 + 36.098 0.0 0.0 3.867 3.867 79.131 0.0 0.0 0.0 4.259687322722812 4.459406196379455 4.259687322722812 4.259687322722812 0 0.8807196863200843 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}{[WN]|[YH]}G{M(Oxidation (M))|F}{I|L}Q;[HS]V{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}Q;[QA]RDG{M(Oxidation (M))|F}{I|L}Q;[PG]K[MN]{M(Oxidation (M))|F}{I|L}Q;[HS]{[QN]|[E{I|L}]|[KN]}[HA]{I|L}Q;[HN]{[ES]|[DT]|[{I|L}C]}VHV{I|L};[HN]{[ES]|[DT]|[{I|L}C]}VH{I|L}V 3.867;3.4107;3.1013;2.2323;1.0318;0.80351;0.63348 -;-;-;-;-;-;- 286 1 2.723 106041.5 1.0 1231 3818 5048 SUDHL4_400M_050219_1,5051 SUDHL4_400M_050219_1,5051,HNYLFLAG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5052 25.423 680.0 113980.0 25 0 10953.0 + -1 LVVCNSTKNT 10 130 568.2926544118675 1134.5707558905349 2 568.2942993044853 MULTI CID FTMS 0 0 0 5048 94122.5078125 0.072395949459559 18 -0.4429302215576172 4 Carbamidomethyl (C) _LVVC(Carbamidomethyl (C))NSTKNT_ REV__ENSG00000130921|ENST00000253233|MTRFR;REV__ENST00000538888.5_1_12:123738221-123738578:+|nuORF;REV__nc|ENSG00000130921|Q9H3J6-2|MTRFR 19.256988751693697 0.5244284437930726 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG{I|L}W 9 -1 39.804 0.0 0.0 3.5083 0.0 0.0 0.0 82.06691156558827 82.06691156558827 24.31926257837824 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}STNG{I|L}W 3.5083 - 945 + 1 2.723 63990.7 1.0 1232 3818 5048 SUDHL4_400M_050219_1,5052 SUDHL4_400M_050219_1,5052,LVVCNSTKNT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5054 25.428 111.0 486230.0 25 0 35613.0 -1 VMPMNTQL 8 98 475.2275059873583 0 475.2281066775322 PEAK CID FTMS 0 0 0 5053 89161.65625 0.7213816059982038 1 -0.0538311004638671 1 Oxidation (M) _VM(Oxidation (M))PMNTQL_ ENSG00000075429|ENST00000533854|CACNG5 9.347437153973935 0.5488964601725408 5 AE 2 -1 10.969 0.0 0.0 1.1565 0.0 0.0 148.02439566436652 597.3124771802851 745.3368728446517 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AE 1.1565 - 24 + 1 2.723 47236.6 1.0 1233 3819 5053 SUDHL4_400M_050219_1,5054 SUDHL4_400M_050219_1,5054,VMPMNTQL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5055 25.441 800.0 135470.0 25 0 35817.0 + 29121 QESFEKSEPL 10 119 597.289333191092 0 597.2910034060478 PEAK CID FTMS 0 0 0 5053 98648.5 0.6399790454764452 -1 0.0383052825927734 2 Unmodified _QESFEKSEPL_ ENSG00000253159|ENST00000252085|PCDHGA12;nc|ENSG00000253159|O60330-2|PCDHGA12 10.823927491677226 0.3685635357628707 5 Q[DG]TR 5 9 11.427 0.0 0.0 0.95816 0.0 0.0 296.1274201890215 336.1556795709594 632.2830997599809 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.75 Q[DG]TR 0.95816 - 73 + 1 2.723 84889.5 0.5400000214576721 1234 3819 5053 SUDHL4_400M_050219_1,5055 SUDHL4_400M_050219_1,5055,QESFEKSEPL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5056 25.444 106.0 589430.0 25 0 71159.0 + 8879 FAEGQGRAL 9 83 474.7484261373076 947.4822993414152 2 474.7487365603447 MULTI CID FTMS 0 0 0 5053 310999.4375 0.5978235267651159 -2 0.0632801055908203 3 Unmodified _FAEGQGRAL_ ENSG00000103335|ENST00000301015|PIEZO1 22.736283301280096 0.2418982879461534 5 A[KP]QGEAE 8 5 42.384 0.0 0.0 4.4733 0.0 0.0 119.07398421455234 0.0 119.07398421455234 0.0 26.898962788844827 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 A[KP]QGEAE 4.4733 - 87 1 2.723 51846.8 1.0 1235 3819 5053 SUDHL4_400M_050219_1,5056 SUDHL4_400M_050219_1,5056,FAEGQGRAL False True FAEGQGRAL 25.443605 474.748736560345 5087978.5 5053.0 ENSG00000103335|ENST00000301015|PIEZO1 5.667278448740642 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5057 25.449 290.0 245200.0 25 0 12679.0 + + 34196 RVQPKVTVY 9 91 545.324812235724 1088.635071538248 2 545.3248779177666 MULTI CID FTMS 0 0 0 5053 136544.578125 0.4529024805107172 -4 0.1169605255126953 4 Unmodified _SLNRKIPVY_ ENSG00000196126|ENST00000360004|HLA-DRB1 42.09456458481378 0.0639583784996157 5 PKVTVY 6 -1 46.688 0.0 0.0 4.2886 0.0 0.0 383.2283050742365 0.0 383.2283050742365 0.0 32.496140821749215 0.0 0.0 0 0.8807196863200843 0.0 0.8494850021680094 0.0 PKVTVY 4.2886 - 96 1 2.723 64215.5 1.0 1236 3819 5053 SUDHL4_400M_050219_1,5057 SUDHL4_400M_050219_1,5057,SLNRKIPVY False False RVQPKVTVY 25.448928 545.324877917767 2963208.25 5053.0 ENSG00000196126|ENST00000360004|HLA-DRB1 4.552172819773356 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5058 25.463 800.0 144210.0 25 0 9307.4 + 17783 KQIKPDMETY 10 145 626.8163390583976 1251.618125183595 2 626.8174926638603 MULTI CID FTMS 0 0 0 5053 110180.046875 0.5003755554122165 -1 0.0383052825927734 5 Unmodified _KQIKPDMETY_ ENSG00000117614|ENST00000236273|SYF2;nc|ENSG00000117614|O95926-2|SYF2 100.7086487251713 0.0085662259466921 5 KQ{I|L}KQ[PG][CS]TY 11 4 + 73.836 0.0 0.0 5.8992 5.8992 85.102 0.0 0.0 0.0 4.259908890235835 4.259908890235835 4.259908890235835 4.259908890235835 0 2.1989700043360187 0.0 1.3098943791441968 0.4247425010840047 KQ{I|L}KQ[PG][CS]TY;[AG]K{I|L}K[DP]METY;[KQ]{I|L}K[DP]METY;[AG]{I|L}KK[DP]METY;[DP]MEK{I|L}QKTY;KQ[PG]Q{I|L}K[CS]TY;[Q{I|L}]KK[DP]METY;[K{I|L}]QK[DP]METY;[DP]MEK{I|L}QTKY;[DP]MEK{I|L}[AG]KTY 5.8992;5.5589;5.1298;4.8049;4.7018;4.6758;4.3758;4.1051;4.0811;3.9696 -;-;+;-;-;-;-;-;-;- + 2356 + 1 2.723 87904.6 0.5899999737739563 1237 3819 5053 SUDHL4_400M_050219_1,5058 SUDHL4_400M_050219_1,5058,KQIKPDMETY True True KQIKPDMETY 25.462768 626.81749266386 924517.6875 5053.0 ENSG00000117614|ENST00000236273|SYF2;;nc|ENSG00000117614|O95926-2|SYF2 7.579554080963135 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5059 25.477 800.0 196210.0 25 0 18543.0 + -1 SQDHGQELMYQ 11 123 676.2814894942686 1350.5484260553371 2 676.2795898318291 MULTI CID FTMS 0 0 0 5053 110468.3515625 0.4270068943441011 -1 0.0383052825927734 6 Oxidation (M) _SQDHGQELM(Oxidation (M))YQ_ REV__ENSG00000169594|ENST00000345382|BNC1 29.84058131909904 0.3915366693542702 5 [HD]EAQQDA{M(Oxidation (M))|F}YQ 11 -1 + 118.68 0.0 0.0 8.7874 8.7874 91.482 0.0 0.0 0.0 5.726825097560436 9.128498242811006 5.726825097560436 5.726825097560436 0 1.3807196863200843 0.0 2.528659694992122 1.1861818737241734 [HD]EAQQDA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}EHQQDA{M(Oxidation (M))|F}YQ;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQDA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QDA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]DA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}EHQ[AG]DA{M(Oxidation (M))|F}YQ;{[DA]|[EG]}EH[AG]QDA{M(Oxidation (M))|F}YQ;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HA[AG]QDA{M(Oxidation (M))|F}YQ;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQ[AG]DA{M(Oxidation (M))|F}YQ;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQW{M(Oxidation (M))|F}YQ 8.7874;8.3633;8.3416;8.1115;8.1115;7.6874;7.6874;7.6657;7.6657;7.5402 -;-;-;-;-;-;-;-;-;- 9184 1 2.723 116823.5 0.5600000023841858 1238 3819 5053 SUDHL4_400M_050219_1,5059 SUDHL4_400M_050219_1,5059,SQDHGQELMYQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5061 25.483 97.0 583910.0 25 0 50976.0 + 19646 GLGPPGRSV 9 75 420.2405198103304 838.4664866874607 2 420.2401000857353 MULTI CID FTMS 0 0 0 5060 507531.4375 0.3633833169239234 4 -0.0721588134765625 1 Unmodified _LGGPFHVL_ ENSG00000179119|ENST00000336349|SPTY2D1;nc|ENSG00000179119|Q68D10-2|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF 24.20995872069341 0.5349487244130675 5 {[VA]|[{I|L}G]}GPP 5 4 47.218 0.0 0.0 5.6315 0.0 0.0 0.0 414.2107332818969 414.2107332818969 37.754537344402905 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[VA]|[{I|L}G]}GPP 5.6315 - 75 + 1 2.718 49740.0 1.0 1239 3820 5060 SUDHL4_400M_050219_1,5061 SUDHL4_400M_050219_1,5061,LGGPFHVL False False GLGPPGRSV 25.482522 420.240100085735 17238394.0 5060.0 ENSG00000179119|ENST00000336349|SPTY2D1;;nc|ENSG00000179119|Q68D10-2|SPTY2D1;;ENST00000536336.5_1_11:18633859-18655855:-|nuORF 3.0649529298146567 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5062 25.484 30.0 2121100.0 25 0 355810.0 + 36220 SVYLKEQY 8 87 515.2676932191429 1028.5208335050856 2 515.2680541872978 MULTI CID FTMS 0 0 0 5060 1520702.75 1.0 0 0.0 2 Unmodified _SVYLKEQY_ REV__ENST00000548132.1_1_12:120592933-120593466:-|nuORF 15.847184025352805 0.6768015514314958 5 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K 9 -1 + 75.497 0.0 0.0 7.3404 7.3404 96.19 0.0 0.0 0.0 60.595172808031215 16.596759748866887 16.596759748866887 24.24742501084005 0 0.805462187404089 2.0 0.0 0.6050541008457975 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}ATT{I|L}K;[VS]Y{M(Oxidation (M))|F}[RV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[{M(Oxidation (M))|F}C]|[YS]}Y[PG]TT{I|L}K 7.3404;4.9829;2.9016;2.6694 -;-;-;- 120 + 1 2.718 54733.2 1.0 1240 3820 5060 SUDHL4_400M_050219_1,5062 SUDHL4_400M_050219_1,5062,SVYLKEQY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5063 25.487 165.0 382580.0 25 0 14074.0 33820 SLDSGLLCL 9 111 460.7419308686169 919.469308804034 2 460.7416869997978 MULTI CID FTMS 0 0 0 5060 269366.0625 0.9344227054472906 2 -0.0603694915771484 3 Unmodified _SLDSGLLCL_ ENSG00000106331|ENST00000639438|PAX4;nc|ENSG00000106331|O43316-4|PAX4 20.453626601364224 0.2830276176381075 5 {[TV]|[{I|L}S]}DP{I|L}T{M(Oxidation (M))|F}K 8 5 + 48.26 0.0 0.0 5.2487 5.2487 90.62 0.0 0.0 0.0 35.32813419726702 3.760542571608042 3.760542571608042 21.841687309218912 0 0.6747425010840047 1.6989700043360187 0.3807196863200844 0.0968040358200661 {[TV]|[{I|L}S]}DP{I|L}T{M(Oxidation (M))|F}K;{[TV]|[{I|L}S]}D[QP][{M(Oxidation (M))|F}T]{I|L};{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[KS]P;{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[PS]K;{[TV]|[{I|L}S]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[QA]{I|L} 5.2487;2.8732;2.0182;1.854;1.6233 -;-;-;-;- 215 + 1 2.718 55755.6 1.0 1241 3820 5060 SUDHL4_400M_050219_1,5063 SUDHL4_400M_050219_1,5063,SLDSGLLCL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5064 25.496 486.0 226540.0 25 0 35004.0 15822 ISGSSPHWST 10 119 529.7475747220768 1057.4805965109535 2 529.7482177615166 MULTI CID FTMS 0 0 0 5060 159905.25 0.248668422567318 4 -0.0721588134765625 4 Unmodified _ISGSSPHWST_ ENST00000370251.3_2_X:152617491-152617668:+|nuORF 19.256988751693697 0.5244284437930726 5 {I|L}SNV[YE]S{I|L} 8 7 33.058 0.0 0.0 3.1261 0.0 0.0 133.99807428716184 0.0 133.99807428716184 0.0 12.43501263708417 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.0 {I|L}SNV[YE]S{I|L} 3.1261 - 608 + 1 2.718 85983.5 1.0 1242 3820 5060 SUDHL4_400M_050219_1,5064 SUDHL4_400M_050219_1,5064,ISGSSPHWST False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5065 25.501 295.0 240540.0 25 0 30548.0 + 42395 VTDSTQVNV 9 119 481.7430612765265 961.471569619853 2 481.7435180544853 MULTI CID FTMS 0 0 0 5060 146207.0 0.6142625798226425 -1 0.0538311004638671 5 Unmodified _VTDSTQVNV_ ENSG00000274523|ENST00000610322|RCC1L;ENST00000420642.1_7:74765936-74789271:+|nuORF;nc|ENSG00000274523|Q96I51-2|RCC1L;nc|ENSG00000274523|Q96I51-3|RCC1L 39.957323273325 0.0756908302845263 5 {[TV]|[{I|L}S]}DS 4 5 26.075 0.0 0.0 2.712 0.0 0.0 0.0 556.2744620361217 556.2744620361217 9.26452357216581 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.6382104921644451 0.0 + {[TV]|[{I|L}S]}DS 2.712 + + 345 1 2.718 59369.5 1.0 1243 3820 5060 SUDHL4_400M_050219_1,5065 SUDHL4_400M_050219_1,5065,VTDSTQVNV True True VTDSTQVNV 25.50093 481.743518054485 1020616.1875 5060.0 ENST00000420642.1_7:74765936-74789271:+|nuORF;;ENSG00000274523|ENST00000610322|RCC1L;;nc|ENSG00000274523|Q96I51-3|RCC1L;;nc|ENSG00000274523|Q96I51-2|RCC1L 4.605419874191284 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5066 25.515 800.0 162170.0 25 0 53396.0 6268 DTTLRGWDTRS 11 82 654.3211564687157 1306.6277600042313 2 654.3219482302666 MULTI CID FTMS 0 0 0 5060 95662.21875 0.5360191217837029 -7 0.1971855163574218 6 Unmodified _DTTLRGWDTRS_ ENSG00000032389|ENST00000382125|EIPR1 8.155526934196011 0.8366696279279818 5 YGC{[NV]|[RG]} 5 9 19.208 0.0 0.0 1.4701 0.0 0.0 752.3921986310562 0.0 752.3921986310562 0.0 1.9968779091581723 0.0 0.0 0 0.0 0.0 0.0 0.0 YGC{[NV]|[RG]} 1.4701 - 86 1 2.718 97595.3 0.5600000023841858 1244 3820 5060 SUDHL4_400M_050219_1,5066 SUDHL4_400M_050219_1,5066,DTTLRGWDTRS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5068 25.531 800.0 46470.0 25 0 12497.0 -1 0 40 1075.440408528677 3223.299396186231 3 1075.772753894329 MULTI CID FTMS 0 0 0 5067 46186.5546875 0.5750455659013567 -4 0.1553974151611328 1 5 G 1 -1 6.9897 0.0 0.0 0.21685 0.0 0.0 1856.6626033416485 1306.596822513643 3163.259425855292 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21685 - 5 + 1 2.718 41463.1 0.3799999952316284 1245 3821 5067 SUDHL4_400M_050219_1,5068 SUDHL4_400M_050219_1,5068, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5069 25.537 312.0 293540.0 25 0 53051.0 -1 0 100 500.2679685875115 499.26069212091153 1 500.2692443728447 MULTI CID FTMS 0 0 0 5067 147826.71875 0.6088710544156088 -6 0.2090778350830078 2 5 S 1 -1 13.539 0.0 0.0 2.7118 0.0 0.0 326.19162886583183 83.01453577213124 409.2061646379631 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 S 2.7118 - 14 + 1 2.718 74063.6 1.0 1246 3821 5067 SUDHL4_400M_050219_1,5069 SUDHL4_400M_050219_1,5069, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5072 25.546 116.0 491540.0 25 0 22411.0 + 32429 SAASAGAEL 9 80 776.3789888898657 775.3717124232656 1 776.3786498904228 MULTI CID FTMS 0 0 0 5071 400418.75 0.922270757947868 3 -0.0262165069580078 1 Unmodified _SAASAGAEL_ ENST00000313478.11_1_15:50941001-50979001:-|nuORF 92.4914307365334 0.0139747738690111 5 {[SA]|[TG]}ASAGAE{I|L} 9 0 + 60.548 0.0 0.0 7.8089 7.8089 84.108 0.0 0.0 0.0 1.5220444404238975 14.973024840566469 1.5220444404238975 0.0963731050575518 0 1.3226825097560422 0.0 2.7134679910804405 0.0 + + {[SA]|[TG]}ASAGAE{I|L};{[SA]|[TG]}AGTGAE{I|L};[QT]SAGAE{I|L};[QT]GTGAE{I|L};{[SA]|[TG]}AGASAE{I|L};[QT]GASAE{I|L};{[SA]|[TG]}ASQAE{I|L};{[SA]|[TG]}AQSAE{I|L};[QT]SQAE{I|L};{[SA]|[TG]}QTGAE{I|L} 7.8089;7.7964;7.6126;7.6002;7.2995;7.1032;6.9439;6.821;6.7564;6.7532 +;-;-;-;-;-;-;-;-;- + 1103 1 2.718 44495.7 1.0 1247 3823 5071 SUDHL4_400M_050219_1,5072 SUDHL4_400M_050219_1,5072,SAASAGAEL False False SAASAGAEL 25.545675 776.378649890423 2182631.5 5071.0 ENST00000313478.11_1_15:50941001-50979001:-|nuORF 6.319222291310628 1.0 True 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5073 25.549 148.0 395060.0 25 0 57300.0 -1 0 93 455.24912163804686 454.24184517144687 1 455.2487365603447 MULTI CID FTMS 0 0 0 5071 405687.59375 0.7557120806328653 -10 0.2613964080810547 2 5 {I|L}Y 2 -1 13.188 0.0 0.0 2.9032 0.0 0.0 160.08399102281248 0.0 160.08399102281248 0.0 4.208187539523749 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Y 2.9032 - 9 + 1 2.718 49955.0 1.0 1248 3823 5071 SUDHL4_400M_050219_1,5073 SUDHL4_400M_050219_1,5073, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5075 25.554 136.0 591740.0 25 0 90410.0 + 6387 DWAKLIKRL 9 84 381.5740135422 1141.7002112268 3 381.5739623904228 MULTI CID FTMS 0 0 0 5074 351913.625 0.0237794900885462 -10 0.2468013763427734 1 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 2.282774691075616 0.8349936567342158 5 K{I|L}K[QP]E 6 -1 24.922 0.0 0.0 2.1828 0.0 0.0 400.2807294156306 0.0 400.2807294156306 0.0 15.088643834802156 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.1828 - 39 1 2.718 72251.1 1.0 1249 3824 5074 SUDHL4_400M_050219_1,5075 SUDHL4_400M_050219_1,5075,DWAKLIKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5076 25.559 254.0 139530.0 25 0 7090.6 -1 SLELPMAMR 9 70 540.263227076485 0 540.2671996951103 PEAK CID FTMS 0 0 0 5074 114414.078125 0.2027564405515705 31 -0.7331562042236328 2 2 Oxidation (M) _SLELPM(Oxidation (M))AM(Oxidation (M))R_ ENSG00000272333|ENST00000420124|KMT2B 7.910154910731844 0.3362437653303669 5 P 1 -1 0.71334 0.0 0.0 0.066141 0.0 0.0 853.3638126961356 125.07225977115468 978.4360724672904 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.066141 + + 5 + 1 2.718 32028.6 1.0 1250 3824 5074 SUDHL4_400M_050219_1,5076 SUDHL4_400M_050219_1,5076,SLELPMAMR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5077 25.563 224.0 318140.0 25 0 30084.0 39696 VEGDLSLLG 9 89 451.7454161185301 0 451.7451660037041 PEAK CID FTMS 0 0 0 5074 161344.875 0.9072067346847332 2 -0.0182685852050781 3 Unmodified _VEGDLSLLG_ ENSG00000159363|ENST00000326735|ATP13A2;nc|ENSG00000159363|Q9NQ11-2|ATP13A2;nc|ENSG00000159363|Q9NQ11-3|ATP13A2 16.942295170755138 0.2326366549411506 5 D 1 8 16.237 0.0 0.0 1.8012 0.0 0.0 188.1178224689268 595.3067721002561 783.424594569183 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 + D 1.8012 + + 36 + 1 2.718 63047.9 1.0 1251 3824 5074 SUDHL4_400M_050219_1,5077 SUDHL4_400M_050219_1,5077,VEGDLSLLG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5080 25.572 95.0 589790.0 25 0 93920.0 + 36240 SYALRDPG 8 70 439.7222203058305 877.429887678461 2 439.7219726443291 MULTI CID FTMS 0 0 0 5079 570958.1875 0.4691535164645091 7 -0.1960678100585937 1 Unmodified _SYALRDPG_ REV__ENSG00000137177|ENST00000259711|KIF13A;REV__ENST00000503342.1_1_6:17812822-17817384:-|nuORF;REV__nc|ENSG00000137177|Q9H1H9-2|KIF13A;REV__nc|ENSG00000137177|Q9H1H9-3|KIF13A;REV__nc|ENSG00000137177|Q9H1H9-4|KIF13A 20.453626601364224 0.6087503291685402 5 YSAP 4 -1 51.23 0.0 0.0 5.8386 0.0 0.0 0.0 456.2202852838501 456.2202852838501 40.7723722827955 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 YSAP 5.8386 - 32 + 1 2.718 50596.5 1.0 1252 3826 5079 SUDHL4_400M_050219_1,5080 SUDHL4_400M_050219_1,5080,SYALRDPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5081 25.574 101.0 583590.0 25 0 82006.0 -1 VLFVEDGKME 10 61 591.7903171271319 1181.5660813210636 2 591.7899047732353 MULTI CID FTMS 0 0 0 5079 568828.1875 0.6967055790867629 -7 0.1442584991455078 2 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 22.65808497894818 0.4596126414678359 5 PGK[{M(Oxidation (M))|F}E] 5 -1 31.466 0.0 0.0 2.6631 0.0 0.0 605.3112660138687 0.0 605.3112660138687 0.0 20.04592922517761 0.0 0.0 0 1.274227503252014 0.0 0.0 0.0 PGK[{M(Oxidation (M))|F}E] 2.6631 - 103 1 2.718 55710.2 1.0 1253 3826 5079 SUDHL4_400M_050219_1,5081 SUDHL4_400M_050219_1,5081,VLFVEDGKME False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5082 25.582 452.0 245760.0 25 0 22409.0 + 26851 PATAVSGTPA 10 132 436.2302150208359 870.4458771084718 2 436.2307617068291 MULTI CID FTMS 0 0 0 5079 111280.3984375 0.2070981982144404 -3 0.0262165069580078 3 Unmodified _PATAVSGTPA_ ENSG00000006047|ENST00000007699|YBX2 20.453626601364224 0.5043500229302764 5 [TP]AAVD 6 7 26.31 0.0 0.0 3.0226 0.0 0.0 0.0 313.1518456966156 313.1518456966156 13.122865368006646 0.0 0.0 0.0 0 0.0 0.619788758288394 0.7716790245598953 0.0 [TP]AAVD 3.0226 - 236 1 2.718 89847.6 1.0 1254 3826 5079 SUDHL4_400M_050219_1,5082 SUDHL4_400M_050219_1,5082,PATAVSGTPA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5083 25.596 800.0 200070.0 25 0 17354.0 1271 AINGDHTESE 10 161 536.7314818944801 1071.44841085576 2 536.7316772341728 MULTI CID FTMS 0 0 0 5079 100243.3984375 0.545479453685396 -2 0.0182685852050781 4 Unmodified _AINGDHTESE_ ENSG00000107521|ENST00000361490|HPS1;ENST00000467246.5_1_10:100191016-100205113:-|nuORF;ENST00000474873.5_1_10:100195027-100205113:-|nuORF;nc|ENSG00000289758|Q92902-2|HPS1;nc|ENSG00000289758|Q92902-3|HPS1;nc|ENSG00000289758|Q92902-4|HPS1 25.399314129420983 0.3980215340001851 5 [{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}EV 9 5 + 19.782 0.0 0.0 1.8463 1.8463 71.075 0.0 0.0 0.0 1.5971092636114683 0.2743824834693953 0.2743824834693953 0.2743824834693953 0 0.3807196863200844 2.0 1.2302046884880935 0.0 [{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}EV;[{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}D{I|L};[{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))Q]R;[{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}[{I|L}T]DD;[{I|L}A]{[{M(Oxidation (M))|F}C]|[YS]}T[C(Carbamidomethyl (C))N]M{I|L};[{I|L}A]{[{M(Oxidation (M))|F}C]|[YS]}C(Carbamidomethyl (C)){[QS]|[NT]}M{I|L};[{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}PC{M(Oxidation (M))|F}P;[{I|L}A]G{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[C(Carbamidomethyl (C))N]M{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{[MS]|[{M(Oxidation (M))|F}A]}M{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{[YD]|[{M(Oxidation (M))|F}M]}A{I|L} 1.8463;1.8207;1.8061;1.7381;1.6973;1.5271;1.5262;1.0659;0.97819;0.41628 -;-;-;-;-;-;-;-;-;- 511 + 1 2.718 126599.0 0.6100000143051147 1255 3826 5079 SUDHL4_400M_050219_1,5083 SUDHL4_400M_050219_1,5083,AINGDHTESE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5085 25.601 63.0 931680.0 25 0 129410.0 -1 LLHSPMME 8 77 487.2274198047775 972.440286676355 2 487.2277099490166 MULTI CID FTMS 0 0 0 5084 644070.25 0.8831119238556725 8 -0.2194118499755859 1 Oxidation (M) _LLHSPM(Oxidation (M))ME_ ENST00000462279.5_1_5:60187964-60188273:-|nuORF 9.347437153973935 0.7675937258251505 5 {I|L}{I|L}PP 4 -1 40.445 0.0 0.0 4.1592 0.0 0.0 0.0 549.1434035526305 549.1434035526305 26.95046257204389 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}PP 4.1592 - 22 + 1 2.718 50493.6 1.0 1256 3827 5084 SUDHL4_400M_050219_1,5085 SUDHL4_400M_050219_1,5085,LLHSPMME False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5086 25.614 800.0 127710.0 25 0 5194.8 + 29536 QLNDIHQQY 9 154 579.7805346094766 1157.5465162857531 2 579.7806274294853 MULTI CID FTMS 0 0 0 5084 90365.359375 0.7221843061374171 -1 0.0288352966308593 2 Unmodified _QLNDIHQQY_ ENSG00000100147|ENST00000255784|CCDC134 128.3654064809346 0.0055442937744054 5 [Q{I|L}][DN]{I|L}HQQY 9 0 + 55.922 0.0 0.0 4.8311 4.8311 86.519 0.0 0.0 0.0 10.026975159433531 9.542425094393252 9.542425094393252 9.208187539523747 0 0.91944517631652 1.6989700043360187 0.0 1.7376954943324543 + + [Q{I|L}][DN]{I|L}HQQY;[Q{I|L}][DN]{I|L}H[AG]QY;[Q{I|L}][DN]{I|L}HQYQ;[Q{I|L}]HDN{I|L}QQY;[Q{I|L}]HDQVQQY;[TP]QEKHQQY;[TP]EQKHQQY;[Q{I|L}][DN]{I|L}HQS{[CT]|[{M(Oxidation (M))|F}G]};[Q{I|L}][DN]{I|L}HQ[AG]Y;[Q{I|L}]HQDVQQY 4.8311;4.0356;4.0067;3.9649;3.8965;3.8802;3.8593;3.8074;3.7337;3.6971 +;-;-;-;-;-;-;-;-;- + 4208 + 1 2.718 79830.9 0.5400000214576721 1257 3827 5084 SUDHL4_400M_050219_1,5086 SUDHL4_400M_050219_1,5086,QLNDIHQQY True True QLNDIHQQY 25.614365 579.780627429485 607859.0 5084.0 ENSG00000100147|ENST00000255784|CCDC134 6.928582986195882 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5087 25.617 148.0 431820.0 25 0 28101.0 -1 ECKECRKCFYQ 11 91 775.8298434705015 1549.6451340078029 2 775.8295776247978 MULTI CID FTMS 0 0 0 5084 367739.25 0.9801163330817172 2 -0.0781326293945312 3 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 24.99096001346401 0.505407273373304 5 [NP]SAGAE[SG]HDA{M(Oxidation (M))|F}[YQ] 15 -1 + 87.788 0.0 0.0 5.6651 5.6651 81.56 0.0 0.0 0.0 11.249387366083 50.31234684152074 11.249387366083 1.7609125905568137 0 1.3494850021680094 0.0 1.329689690656103 1.416386562212267 [NP]SAGAE[SG]HDA{M(Oxidation (M))|F}[YQ];[NP]ASGAE[SG]HDA{M(Oxidation (M))|F}[YQ];[NP]SQAE[SG]HDA{M(Oxidation (M))|F}[YQ];[NP]SAGEA[SG]HDA{M(Oxidation (M))|F}[YQ];[NP]SAGE[HS]QDA{M(Oxidation (M))|F}[YQ];[NP]ASGEA[SG]HDA{M(Oxidation (M))|F}[YQ];[NP]AGSAE[SG]HDA{M(Oxidation (M))|F}[YQ];[NP]ASGE[HS]QDA{M(Oxidation (M))|F}[YQ];[NP]QSAE[SG]HDA{M(Oxidation (M))|F}[YQ];[NP]SAQE[SG]HDA{M(Oxidation (M))|F}[YQ] 5.6651;5.5514;5.2333;5.0609;4.9646;4.9473;4.9356;4.851;4.8118;4.8107 -;-;-;-;-;-;-;-;-;- 10191 1 2.718 47982.4 1.0 1258 3827 5084 SUDHL4_400M_050219_1,5087 SUDHL4_400M_050219_1,5087,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5088 25.621 215.0 594570.0 25 0 80892.0 + -1 MPKLGKARLI 10 91 571.8576929030158 1141.7008328728316 2 571.8574706912041 MULTI CID FTMS 0 0 0 5084 255624.515625 0.1082833777128347 -7 0.1192626953125 4 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 19.256988751693697 0.5244284437930726 5 K{I|L}KQPE 6 -1 49.373 0.0 0.0 4.3245 0.0 0.0 400.279588767775 0.0 400.279588767775 0.0 42.38351285388511 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.5 K{I|L}KQPE 4.3245 - 60 1 2.718 100576.0 1.0 1259 3827 5084 SUDHL4_400M_050219_1,5088 SUDHL4_400M_050219_1,5088,MPKLGKARLI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5089 25.635 800.0 79444.0 25 0 6291.3 + 25517 NENRQFEQIS 10 89 632.799688561243 1263.584824189286 2 632.8001586794853 MULTI CID FTMS 0 0 0 5084 92253.03125 1.0 0 0.0 5 Unmodified _NENRQFEQIS_ REV__ENSG00000061987|ENST00000393630|MON2;REV__ENST00000547095.5_1_12:62864501-62986526:+|nuORF;REV__ENST00000551307.5_1_12:62954224-62986526:+|nuORF;REV__nc|ENSG00000061987|Q7Z3U7-2|MON2;REV__nc|ENSG00000061987|Q7Z3U7-3|MON2;REV__nc|ENSG00000061987|Q7Z3U7-5|MON2;REV__nc|ENSG00000061987|Q7Z3U7-6|MON2 21.53697664764585 0.484802182336468 5 PDG{M(Oxidation (M))|F}{I|L}QS 7 -1 31.119 0.0 0.0 2.4627 0.0 0.0 501.2424183576188 0.0 501.2424183576188 0.0 8.815381650824936 0.0 0.0 0 0.4876954943324546 0.0 0.0 0.0 PDG{M(Oxidation (M))|F}{I|L}QS 2.4627 - 173 1 2.718 56003.9 0.550000011920929 1260 3827 5084 SUDHL4_400M_050219_1,5089 SUDHL4_400M_050219_1,5089,NENRQFEQIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5090 25.644 467.0 277560.0 25 0 80418.0 + 2095 APRHGLQSL 9 123 489.77926180551566 977.5439706778312 2 490.2832519412041 MULTI CID FTMS 0 0 0 5084 137426.671875 0.3722232459120987 -7 0.1192626953125 6 Unmodified _APRHGLQSL_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A;nc|ENSG00000204469|P48634-4|PRRC2A 15.847184025352805 0.4077185912009129 5 [{M(Oxidation (M))|F}V]Q{I|L}[{I|L}P]VY 8 8 + 38.874 0.0 0.0 3.9767 3.9767 84.781 0.0 0.0 0.0 21.399699876253777 12.21848749616356 12.21848749616356 9.262137858390812 0 0.0 1.5228787452803376 0.0 0.0 [{M(Oxidation (M))|F}V]Q{I|L}[{I|L}P]VY;[{M(Oxidation (M))|F}V][AG]{I|L}[{I|L}P]VY 3.9767;3.0292 -;- 121 + 1 2.718 101174.6 1.0 1261 3827 5084 SUDHL4_400M_050219_1,5090 SUDHL4_400M_050219_1,5090,APRHGLQSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5092 25.649 83.0 521320.0 25 0 52336.0 + 31583 RQPPSTTTF 9 78 517.7672135746557 1033.5198742161112 2 517.7671996951103 MULTI CID FTMS 0 0 0 5091 429955.8125 0.7467407333031205 7 -0.1716232299804687 1 Unmodified _RQPPSTTTF_ nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1 39.94969957227396 0.0757326808254658 5 TTT[W{I|L}]T{M(Oxidation (M))|F} 7 7 43.192 0.0 0.0 4.1791 0.0 0.0 165.0850730459925 0.0 165.0850730459925 0.0 24.25205716106127 0.0 0.0 0 0.0 0.0 1.774227503252014 0.0 TTT[W{I|L}]T{M(Oxidation (M))|F} 4.1791 - 157 + 1 2.733 40470.1 1.0 1262 3828 5091 SUDHL4_400M_050219_1,5092 SUDHL4_400M_050219_1,5092,RQPPSTTTF True True RQPPSTTTF 25.649277 517.76719969511 11785131.0 5091.0 nc|ENSG00000139697|A3KN83-4|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1 8.152425130208334 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 5093 25.653 223.0 337980.0 25 0 41445.0 45120 YQANANQLQ 9 81 525.2540387944683 1048.4935246557366 2 525.2536498904228 MULTI CID FTMS 0 0 0 5091 190003.859375 0.3030389957411924 -5 0.1028404235839843 2 Unmodified _YQANANQLQ_ ENSG00000089177|ENST00000354981|KIF16B;nc|ENSG00000089177|Q96L93-2|KIF16B;nc|ENSG00000089177|Q96L93-4|KIF16B;nc|ENSG00000089177|Q96L93-5|KIF16B;nc|ENSG00000089177|Q96L93-6|KIF16B 20.453626601364224 0.2830276176381075 5 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q 8 6 + 44.13 0.0 0.0 4.2089 4.2089 77.93 0.0 0.0 0.0 2.508855429495533 2.508855429495533 2.508855429495533 2.508855429495533 0 0.9247425010840048 0.0 0.0 0.4247425010840047 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;[{I|L}V][{M(Oxidation (M))|F}E]DW{I|L}Q;{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{[DA]|[EG]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}{[DA]|[EG]}[C(Carbamidomethyl (C))R]{I|L}Q;[{I|L}V][{M(Oxidation (M))|F}E]D{I|L}WQ;[YQ][SG][PA]W{I|L}Q;{[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]Q{I|L};[YQ][SG][PA]{I|L}WQ;{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]Q{I|L} 4.2089;3.9696;3.9218;3.3255;3.0384;3.0377;2.9179;2.0039;1.986;1.7168 -;-;-;-;-;-;-;-;-;- 214 + 1 2.733 60687.3 1.0 1263 3828 5091 SUDHL4_400M_050219_1,5093 SUDHL4_400M_050219_1,5093,YQANANQLQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5094 25.656 137.0 422040.0 25 0 42713.0 45592 YVGGAEAR 8 82 411.70884974762606 821.4031465620521 2 411.7087280154228 MULTI CID FTMS 0 0 0 5091 201775.515625 0.7675991095264407 -2 0.0766239166259765 3 Unmodified _YVGGAEAR_ CON__Streptavidin 5.760428011301431 0.7893668129297577 5 [YV]{[QG]|[NA]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 7 4 + 20.246 0.0 0.0 2.4648 2.4648 82.436 0.0 0.0 0.0 6.26628182818699 0.0683942453030539 0.0683942453030539 10.3342375548695 0 0.0 2.0 0.0 0.0 [YV]{[QG]|[NA]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[AG][YR]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 2.4648;1.2066 -;- 39 1 2.733 53013.8 1.0 1264 3828 5091 SUDHL4_400M_050219_1,5094 SUDHL4_400M_050219_1,5094,YVGGAEAR False False False False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 5095 25.66 200.0 209760.0 25 0 8876.9 + -1 PMSSCPWQ 8 93 496.7033495891295 991.392146245059 2 496.7032653689384 MULTI CID FTMS 0 0 0 5091 168297.1875 1.0 0 0.0 4 Carbamidomethyl (C) _PMSSC(Carbamidomethyl (C))PWQ_ REV__ENSG00000180347|ENST00000615280|ITPRID1;REV__nc|ENSG00000180347|Q6ZRS4-3|ITPRID1;REV__nc|ENSG00000180347|Q6ZRS4-4|ITPRID1 12.531546534597751 0.7257836412119636 5 WQ 2 -1 17.747 0.0 0.0 1.7901 0.0 0.0 659.2459803288466 0.0 659.2459803288466 0.0 5.528871982441359 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 WQ 1.7901 + + 109 + 1 2.733 38121.7 1.0 1265 3828 5091 SUDHL4_400M_050219_1,5095 SUDHL4_400M_050219_1,5095,PMSSCPWQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5096 25.674 800.0 144310.0 25 0 8873.4 + 35395 STFINWLNHTN 11 132 673.8257451082081 1345.6369372832162 2 673.8259765505791 MULTI CID FTMS 0 0 0 5091 108117.5703125 0.4894952893098271 -3 0.080636978149414 5 Unmodified _STFINWLNHTN_ ENSG00000187554|ENST00000642603|TLR5 49.55428908609986 0.1200983873401432 5 TSQSP[HQ]KSTN 11 9 94.915 0.0 0.0 7.0535 0.0 0.0 132.05302722637867 0.0 132.05302722637867 0.0 64.2119585229345 0.0 0.0 0 0.0 0.0 2.360924374808178 1.8098943791441968 TSQSP[HQ]KSTN 7.0535 - 2707 + 1 2.733 88726.9 0.5600000023841858 1266 3828 5091 SUDHL4_400M_050219_1,5096 SUDHL4_400M_050219_1,5096,STFINWLNHTN True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5099 25.687 362.0 255820.0 25 0 28427.0 + 36668 TAYPGQTQY 9 107 514.7381044117641 1027.461655890328 2 514.7377807497978 MULTI CID FTMS 0 0 0 5098 130528.875 0.1018797037595538 11 -0.2482566833496093 1 Unmodified _TAYPGQTQY_ ENSG00000158161|ENST00000373871|EYA3;ENST00000471498.5_1_1:28324859-28384546:-|nuORF;nc|ENSG00000158161|Q99504-3|EYA3;nc|ENSG00000158161|Q99504-4|EYA3;nc|ENSG00000158161|Q99504-5|EYA3 13.90604991867851 0.4602628045680013 5 [TA]G[PG]M 6 5 18.393 0.0 0.0 1.7902 0.0 0.0 0.0 510.22872066987816 510.22872066987816 3.104459326986838 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.7059771852360797 0.0 [TA]G[PG]M 1.7902 - 301 1 2.733 77774.2 1.0 1267 3830 5098 SUDHL4_400M_050219_1,5099 SUDHL4_400M_050219_1,5099,TAYPGQTQY False True TAYPGQTQY 25.686973 514.737780749798 6745549.0 5098.0 ENSG00000158161|ENST00000373871|EYA3;;nc|ENSG00000158161|Q99504-5|EYA3;;ENST00000471498.5_1_1:28324859-28384546:-|nuORF;;nc|ENSG00000158161|Q99504-3|EYA3;;nc|ENSG00000158161|Q99504-4|EYA3 0.0197946429252624 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5100 25.696 487.0 215010.0 25 0 35441.0 + 33519 SILDNFIY 8 120 492.75320826728847 0 492.7533752322197 PEAK CID FTMS 0 0 0 5098 105058.25 0.7423328455274679 -4 0.1109943389892578 2 Unmodified _SILDNFIY_ REV__ENST00000534131.1_1_11:88068041-88070840:-|nuORF 24.67388899826682 0.3296343502680589 5 E 1 -1 11.722 0.0 0.0 1.1918 0.0 0.0 783.3752844771567 68.05130945377186 851.4265939309286 0.0 0.0 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 E 1.1918 - 64 + 1 2.733 84288.7 1.0 1268 3830 5098 SUDHL4_400M_050219_1,5100 SUDHL4_400M_050219_1,5100,SILDNFIY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5101 25.709 800.0 115890.0 25 0 14701.0 + 12140 GQKQYNVDY 9 123 557.7617427377467 0 557.7619506716728 PEAK CID FTMS 0 0 0 5098 83939.2109375 1.0 0 0.0 3 Unmodified _GQKQYNVDY_ ENSG00000138663|ENST00000264389|COPS4;nc|ENSG00000138663|Q9BT78-2|COPS4 30.63653989081413 0.1077493867305487 5 D 1 8 13.411 0.0 0.0 1.2044 0.0 0.0 817.4081293477113 178.05127893619377 995.4594082839052 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 + D 1.2044 + + 76 + 1 2.733 76238.3 0.6399999856948853 1269 3830 5098 SUDHL4_400M_050219_1,5101 SUDHL4_400M_050219_1,5101,GQKQYNVDY True True GQKQYNVDY 25.7094 557.761950671673 385506.8125 5098.0 ENSG00000138663|ENST00000264389|COPS4;;nc|ENSG00000138663|Q9BT78-2|COPS4 5.914060433705648 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5103 25.727 800.0 113740.0 25 0 9035.8 34317 SLRTSERKL 9 126 545.324812235724 1088.635071538248 2 545.3242065310478 MULTI CID FTMS 0 0 0 5102 53572.53515625 0.1776938666674959 8 -0.1592063903808593 1 Unmodified _SLRTSERKL_ ENSG00000133422|ENST00000397641|MORC2;nc|ENSG00000133422|Q9Y6X9-2|MORC2 14.838274106304384 0.4350285940865338 5 Y 1 9 13.495 0.0 0.0 1.2396 0.0 0.0 907.5608202948872 0.0 907.5608202948872 0.0 3.313789158407872 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2396 - 80 + 1 2.727 75374.6 0.5299999713897705 1270 3831 5102 SUDHL4_400M_050219_1,5103 SUDHL4_400M_050219_1,5103,SLRTSERKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5104 25.732 239.0 342300.0 25 0 18497.0 + 2677 ATDPTIHTV 9 106 477.7482372105651 953.4819214879302 2 477.7479431033134 MULTI CID FTMS 0 0 0 5102 226322.890625 0.3315116971749927 -4 0.1136627197265625 2 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 64.23631603340823 0.0237365939569086 5 [TA]DP[{I|L}T]HTV 9 0 + 56.475 0.0 0.0 5.923 5.923 92.643 0.0 0.0 0.0 35.23264663105415 9.265224064671145 9.265224064671145 22.204999916446795 0 0.7614393726401688 2.0 1.174742501084005 0.0 + + [TA]DP[{I|L}T]HTV;[TA]DP[Y{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[DP]TKKPD[PG];{[ES]|[DT]|[{I|L}C]}PKKPD[PG];[TA]{[ET]|[MV]}[VP]HTV;[PS]EKKPD[PG];[TA]{[ET]|[MV]}T{I|L}[YR];[TA]{[ET]|[MV]}KK[YN];[HT]V{I|L}T{[ET]|[MV]}[PG] 5.923;3.5942;3.4326;3.2253;2.6689;2.5512;2.4618;1.3594;0.72795 +;-;-;-;-;-;-;-;- + 384 + 1 2.727 66707.6 1.0 1271 3831 5102 SUDHL4_400M_050219_1,5104 SUDHL4_400M_050219_1,5104,ATDPTIHTV True True ATDPTIHTV 25.731578 477.747943103313 8357254.5 5102.0 nc|ENSG00000086848|Q9H6U8|ALG9;;ENSG00000086848|ENST00000616540|ALG9;;nc|ENSG00000086848|Q9H6U8-2|ALG9;;nc|ENSG00000086848|Q9H6U8-4|ALG9 7.427981376647949 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5105 25.741 560.0 261720.0 25 0 11045.0 + 40269 VGTQSRIYAK 10 156 374.88019862384135 1121.618766471724 3 374.8804504275322 MULTI CID FTMS 0 0 0 5102 124867.5390625 0.8137411643425664 -2 0.0355300903320312 3 Unmodified _VGTQSRIYAK_ REV__ENSG00000117174|ENST00000370574|ZNHIT6;REV__nc|ENSG00000117174|Q9NWK9-2|ZNHIT6 6.723162845929126 0.6955379296933136 5 AAEQ 4 -1 22.193 0.0 0.0 1.9786 0.0 0.0 704.3977953414179 0.0 704.3977953414179 0.0 3.781446971601312 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.0 AAEQ 1.9786 - 83 1 2.727 117427.5 1.0 1272 3831 5102 SUDHL4_400M_050219_1,5105 SUDHL4_400M_050219_1,5105,VGTQSRIYAK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5106 25.745 172.0 540500.0 25 0 88112.0 + 13045 HAVGPSTSL 9 106 434.7301332671909 867.4457136011819 2 434.7297546267509 MULTI CID FTMS 0 0 0 5102 340514.0 0.2151902423926781 -10 0.1946392059326172 4 Unmodified _HAVGPSTSL_ ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12 56.541270873467816 0.0279970378729908 5 [HA]VG[PS]TS{I|L} 9 0 + 42.91 0.0 0.0 4.9467 4.9467 87.817 0.0 0.0 0.0 7.87803469694191 15.742946587693964 7.87803469694191 9.488474775526186 0 0.7742275032520141 1.0 0.805462187404089 0.0 + + [HA]VG[PS]TS{I|L};[HA][KP]DTS{I|L};[HV]TPNTS{I|L};[YR]D[KS]S{I|L};{[VA]|[{I|L}G]}HG[PS]TS{I|L};{[TV]|[{I|L}S]}HP{[QS]|[NT]}S{I|L} 4.9467;3.8529;3.8503;3.671;2.4726;1.8911 +;-;-;-;-;- + 114 1 2.727 78655.3 1.0 1273 3831 5102 SUDHL4_400M_050219_1,5106 SUDHL4_400M_050219_1,5106,HAVGPSTSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5108 25.752 262.0 287540.0 25 0 57542.0 + -1 HAIPPTLAM 9 97 483.7574725666307 965.5003922000616 2 483.7571594119072 MULTI CID FTMS 0 0 0 5107 121558.671875 0.7675495672087763 1 -0.0183315277099609 1 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ nc|ENSG00000125107|A5YKK6-3|CNOT1;ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1 30.22481116460888 0.1466181017706357 5 A{M(Oxidation (M))|F} 2 -1 25.969 0.0 0.0 2.6897 0.0 0.0 729.416970424474 0.0 729.416970424474 0.0 10.730143785107629 0.0 0.0 0 0.5 0.0 0.0 0.0 A{M(Oxidation (M))|F} 2.6897 + + 82 + 1 2.727 65482.3 1.0 1274 3832 5107 SUDHL4_400M_050219_1,5108 SUDHL4_400M_050219_1,5108,HAIPPTLAM False False HAIPPTLAM 25.752039 483.757159411907 2993802.75 5107.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 5.439728736877441 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5109 25.756 183.0 271790.0 25 0 39918.0 + 8445 ESPNGYRLQ 9 78 532.2622900662618 1062.5100271993235 2 532.2631103396416 MULTI CID FTMS 0 0 0 5107 147774.78125 0.8516348133079482 -3 0.0707683563232421 2 Unmodified _ESPNGYRLQ_ REV__ENSG00000126016|ENST00000371959|AMOT 24.020572477871973 0.2255576514309169 5 {I|L}Q 2 -1 29.776 0.0 0.0 2.8024 0.0 0.0 803.3571168983455 0.0 803.3571168983455 0.0 7.898070557679198 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.3494850021680094 {I|L}Q 2.8024 + + 88 + 1 2.727 42741.1 1.0 1275 3832 5107 SUDHL4_400M_050219_1,5109 SUDHL4_400M_050219_1,5109,ESPNGYRLQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5110 25.76 213.0 428080.0 25 0 37569.0 + 39806 VTDHNLHEL 9 126 359.848303341318 1076.523080624154 3 359.8486816287041 MULTI CID FTMS 0 0 0 5107 243746.203125 0.8363623525566709 -2 0.066741943359375 3 Unmodified _VESTDVSDLL_ ENSG00000177971|ENST00000403490|IMP3 24.020572477871973 0.4289996903560794 5 {I|L}CM{I|L}ASEV{I|L} 9 8 39.713 0.0 0.0 3.689 0.0 0.0 99.0668390814296 0.0 99.0668390814296 0.0 24.730331831454222 0.0 0.0 0 1.3658603893571173 0.0 1.524227503252014 0.0 {I|L}CM{I|L}ASEV{I|L} 3.689 - 539 + 1 2.727 83731.9 1.0 1276 3832 5107 SUDHL4_400M_050219_1,5110 SUDHL4_400M_050219_1,5110,VESTDVSDLL False False VTDHNLHEL 25.759607 359.8491 1529289.125 5107.0 ENSG00000177971|ENST00000403490|IMP3 4.8309853076934814 3.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5111 25.763 181.0 301980.0 25 0 62969.0 + 42179 VSDSGAHVL 9 94 442.7272520217815 883.439951110363 2 442.7270690798759 MULTI CID FTMS 0 0 0 5107 174528.0 0.2770340406521914 -6 0.1777362823486328 4 Unmodified _VSDSGAHVL_ ENSG00000064102|ENST00000261191|INTS13 42.09456458481378 0.0639583784996157 5 VSDSQHV{I|L} 8 2 + 61.532 0.0 0.0 6.9651 6.9651 93.303 0.0 0.0 0.0 49.45139042519087 3.0638420770633346 3.0638420770633346 9.262137858390815 0 1.0297966019298022 2.0 0.0 0.0 VSDSQHV{I|L};VSDS[AG]HV{I|L};VSQQ[Y{M(Oxidation (M))|F}]{I|L};V{[C(Carbamidomethyl (C))E]|[WC]}QHV{I|L};V{[C(Carbamidomethyl (C))E]|[WC]}[AG]HV{I|L};[PA][KA]QSD[PA];[EP][R{I|L}]SD[PA];[EP][KS]QQ[PA] 6.9651;5.9166;3.9431;2.2532;1.1971;1.0287;0.49474;0.070197 -;+;-;-;-;-;-;- + 224 + 1 2.727 47718.1 1.0 1277 3832 5107 SUDHL4_400M_050219_1,5111 SUDHL4_400M_050219_1,5111,VSDSGAHVL True True VSDSGAHVL 25.763099 442.727069079876 6773028.5 5107.0 ENSG00000064102|ENST00000261191|INTS13 5.554377873738607 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5113 25.774 458.0 242960.0 25 0 18185.0 31448 RPQSNWKESAN 11 120 658.8204954674283 1315.6264380016564 2 658.8203002810478 MULTI CID FTMS 0 0 0 5112 327860.875 0.4740422664028085 -7 0.1960678100585937 1 Unmodified _RPQSNWKESAN_ ENSG00000197077|ENST00000358431|KIAA1671 33.4449034751529 0.3133739643825231 5 DPS[WK]PSQSAN 11 6 92.138 0.0 0.0 7.0034 0.0 0.0 100.06432540107578 0.0 100.06432540107578 0.0 45.2269972409058 0.0 0.0 0 2.113982988912431 0.0 3.4604093769761874 0.0 DPS[WK]PSQSAN 7.0034 - 2887 1 2.727 84981.4 1.0 1278 3833 5112 SUDHL4_400M_050219_1,5113 SUDHL4_400M_050219_1,5113,RPQSNWKESAN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5114 25.78 364.0 308080.0 25 0 48889.0 + 18199 KVAPAPAVV 9 135 426.2712931935252 850.5280334538504 2 426.2714416384697 MULTI CID FTMS 0 0 0 5112 162358.59375 0.0760553348810606 -13 0.2864952087402344 2 Unmodified _KVAPAPAVV_ ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF 32.30548876998284 0.1201446275138228 5 [PA]VKAPAVV 9 4 + 54.185 0.0 0.0 6.3707 6.3707 92.318 0.0 0.0 0.0 9.513362779563138 39.58088887298699 9.513362779563138 11.116332698287636 0 0.6747425010840047 0.5376020021010439 0.0 0.0 [PA]VKAPAVV;[VP]AKAPAVV;[PA][PA]VKAVV;[PA]V[PA]KAVV;[PA][PA]VAKVV;[PA]V[PA]AKVV;[VP]A[PA]KAVV;[VP]A[PA]AKVV;[{I|L}V][TA][H{I|L}]VV 6.3707;5.0638;4.4332;4.4332;4.0793;4.0793;3.1262;2.7723;1.5461 -;-;-;-;-;-;-;-;- 179 1 2.727 90900.2 1.0 1279 3833 5112 SUDHL4_400M_050219_1,5114 SUDHL4_400M_050219_1,5114,KVAPAPAVV True True KVAPAPAVV 25.780203 426.27144163847 23882736.0 5112.0 ENST00000463740.5_1_9:136215098-136217195:+|nuORF;;ENSG00000148303|ENST00000323345|RPL7A;;ENST00000424041.1_1_20:36073469-36073910:-|nuORF 5.443853855133057 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5115 25.785 249.0 143100.0 25 0 5784.2 + 42366 VTDHNLHEL 9 79 539.2696051384062 1076.5246573436125 2 539.2695190310478 MULTI CID FTMS 0 0 0 5112 151347.265625 1.0 0 0.0 3 Unmodified _VTDHNLHEL_ ENSG00000177971|ENST00000403490|IMP3 18.373094154950223 0.3393451798331396 5 VTD 3 6 34.693 0.0 0.0 3.2227 0.0 0.0 0.0 758.3607271783811 758.3607271783811 22.01667520279372 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + VTD 3.2227 + + 59 + 1 2.727 34963.1 1.0 1280 3833 5112 SUDHL4_400M_050219_1,5115 SUDHL4_400M_050219_1,5115,VTDHNLHEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5117 25.792 231.0 258290.0 25 0 69528.0 -1 0 88 500.2679685875115 499.26069212091153 1 500.2684509158134 MULTI CID FTMS 0 0 0 5116 124357.1875 0.5122043735905122 7 -0.1414546966552734 1 5 V 1 -1 9.8329 0.0 0.0 1.9695 0.0 0.0 382.18147414171074 0.0 382.18147414171074 0.0 4.348331157524967 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.9695 - 8 + 1 2.727 53346.4 1.0 1281 3834 5116 SUDHL4_400M_050219_1,5117 SUDHL4_400M_050219_1,5117, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5118 25.799 393.0 111410.0 25 0 12261.0 -1 TVRPCNNY 8 71 512.237210374292 0 512.2361328005791 PEAK CID FTMS 0 0 0 5116 97711.3984375 0.1201162926134715 16 -0.3400135040283203 2 Carbamidomethyl (C) _TVRPC(Carbamidomethyl (C))NNY_ ENSG00000183098|ENST00000377047|GPC6 2.889219685676258 0.5898224805723975 5 P 1 -1 5.4846 0.0 0.0 0.53641 0.0 0.0 511.1593484084207 411.2240709777589 922.3834193861796 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.53641 + + 1 + 1 2.727 41629.8 1.0 1282 3834 5116 SUDHL4_400M_050219_1,5118 SUDHL4_400M_050219_1,5118,TVRPCNNY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5119 25.801 137.0 465410.0 25 0 135860.0 -1 0 89 416.2156048932298 415.2083284266298 1 416.2125427126884 MULTI CID FTMS 0 0 0 5116 301090.8125 0.955165378560467 1 -0.0304508209228515 3 5 Y 1 -1 10.596 0.0 0.0 2.552 0.0 0.0 234.13468753483136 0.0 234.13468753483136 0.0 7.496988247154075 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.552 - 17 + 1 2.727 55294.0 1.0 1283 3834 5116 SUDHL4_400M_050219_1,5119 SUDHL4_400M_050219_1,5119, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5120 25.815 800.0 133590.0 25 0 7486.6 + 1755 ALREENEQL 9 159 551.2811783365694 1100.547803739939 2 551.2806884646416 MULTI CID FTMS 0 0 0 5116 160540.921875 1.0 0 0.0 4 Unmodified _ALREENEQL_ ENSG00000186532|ENST00000305513|SMYD4 47.74868867922204 0.0453060283459952 5 [{I|L}A]REENEQ{I|L} 9 0 + 71.282 0.0 0.0 6.4769 6.4769 91.253 0.0 0.0 0.0 15.522562268522575 16.478174818886373 15.522562268522575 9.208187539523747 0 0.2887254899964357 1.5228787452803376 0.0 0.7302046884880937 + + [{I|L}A]REENEQ{I|L};[{I|L}A]REEGGEQ{I|L};[{I|L}A]REENE[AG]{I|L};{[QN]|[E{I|L}]|[KN]}N{I|L}ENEQ{I|L};[{I|L}A]REEGGE[AG]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}ENEQ{I|L};{[QN]|[E{I|L}]|[KN]}GG{I|L}ENEQ{I|L};{[QN]|[E{I|L}]|[KN]}N{I|L}ENE[AG]{I|L};{[QN]|[E{I|L}]|[KN]}N{I|L}EGGEQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}ENEQ{I|L} 6.4769;5.6402;5.6402;5.0665;4.8075;4.6602;4.2298;4.2298;4.2298;4.2106 +;-;-;-;-;-;-;-;-;- + 1366 1 2.727 83726.6 0.6800000071525574 1284 3834 5116 SUDHL4_400M_050219_1,5120 SUDHL4_400M_050219_1,5120,ALREENEQL True True ALREENEQL 25.815224 551.280688464642 756602.875 5116.0 ENSG00000186532|ENST00000305513|SMYD4 6.309907913208008 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5122 25.82 3.7 17756000.0 25 0 2306600.0 + 6388 DWAKLIKRL 9 82 381.5740135422 1141.7002112268 3 381.5742980837822 MULTI CID FTMS 0 0 0 5121 13975596.0 0.9443582826994183 1 -0.0121192932128906 1 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 7.608950283845883 0.6490595679007971 5 {M(Oxidation (M))|F}PQK{I|L}K[R{I|L}]{I|L} 9 -1 + 48.822 0.0 0.0 4.2763 4.2763 84.794 0.0 0.0 0.0 37.22865638833312 2.6760624017703094 2.6760624017703094 9.208187539523747 0 0.0 0.0 0.0 0.5 {M(Oxidation (M))|F}PQK{I|L}K[R{I|L}]{I|L};{M(Oxidation (M))|F}P[AG]K{I|L}K[R{I|L}]{I|L};[PG]A{M(Oxidation (M))|F}K{I|L}K[R{I|L}]{I|L} 4.2763;3.4698;1.8436 -;-;- 57 + 1 2.727 57125.5 1.0 1285 3835 5121 SUDHL4_400M_050219_1,5122 SUDHL4_400M_050219_1,5122,DWAKLIKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5123 25.824 181.0 574940.0 25 0 90895.0 + 26454 NTIDPSHPM 9 99 506.23177559675577 1010.4489982603116 2 506.2321349978447 MULTI CID FTMS 0 0 0 5121 263472.84375 0.0280940007794622 -17 0.4308109283447265 2 Unmodified _NTIDPSHPM_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 26.88365393820708 0.1891292719743517 5 {[TV]|[{I|L}S]}S 3 7 27.192 0.0 0.0 2.691 0.0 0.0 0.0 720.2779832058771 720.2779832058771 10.358762178635024 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5 0.0 {[TV]|[{I|L}S]}S 2.691 - 338 1 2.727 81419.2 1.0 1286 3835 5121 SUDHL4_400M_050219_1,5123 SUDHL4_400M_050219_1,5123,NTIDPSHPM False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5124 25.827 187.0 360730.0 25 0 41140.0 + 32223 RVYNWDVKR 9 99 412.55964164039176 1234.6570955213754 3 412.5592529177666 MULTI CID FTMS 0 0 0 5121 165555.515625 0.949285703150604 -2 0.0521793365478515 3 Unmodified _RVYNWDVKR_ ENSG00000155959|ENST00000286428|VBP1;nc|ENSG00000155959|P61758-2|VBP1 36.506200033944 0.094635877243972 5 [YV]RNG{I|L} 6 7 37.011 0.0 0.0 2.9977 0.0 0.0 0.0 529.2532618634253 529.2532618634253 12.793125009847897 0.0 0.0 0.0 0 0.0 2.0 0.0 0.2396518287104437 [YV]RNG{I|L} 2.9977 - 178 1 2.727 56934.1 1.0 1287 3835 5121 SUDHL4_400M_050219_1,5124 SUDHL4_400M_050219_1,5124,RVYNWDVKR True True RVYNWDVKR 25.827382 412.559252917767 1088382.25 5121.0 ENSG00000155959|ENST00000286428|VBP1;;nc|ENSG00000155959|P61758-2|VBP1 6.259305000305176 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5126 25.832 94.0 744220.0 25 0 108310.0 -1 VLFVEDGKME 10 64 591.7903171271319 1181.5660813210636 2 591.7899658083916 MULTI CID FTMS 0 0 0 5125 663754.6875 0.8129723598239246 3 -0.0413379669189453 1 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 28.49450938151212 0.328477364964909 5 G[K{I|L}]GK[{M(Oxidation (M))|F}E] 7 -1 34.551 0.0 0.0 2.9242 0.0 0.0 404.16731459785314 0.0 404.16731459785314 0.0 23.13093314103925 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.3252574989159953 G[K{I|L}]GK[{M(Oxidation (M))|F}E] 2.9242 - 72 1 2.727 56640.3 1.0 1288 3836 5125 SUDHL4_400M_050219_1,5126 SUDHL4_400M_050219_1,5126,VLFVEDGKME False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5127 25.837 296.0 267430.0 25 0 15358.0 + 34811 SQFGGGSQY 9 101 465.70158601148273 929.3886190897656 2 465.7010681033134 MULTI CID FTMS 0 0 0 5125 155157.515625 0.0853478557699355 -10 0.2603664398193359 2 Unmodified _SQFGGGSQY_ ENSG00000100353|ENST00000216190|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 37.97399986684836 0.0865783450051559 5 [AG]S{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 5 7 19.492 0.0 0.0 2.0973 0.0 0.0 0.0 404.18650662322176 404.18650662322176 -2.9824934810296995 0.0 -2.9824934810296995 0.0 0 0.0 1.154901959985743 0.5010912013506126 0.0 [AG]S{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 2.0973 - 300 1 2.727 65383.2 1.0 1289 3836 5125 SUDHL4_400M_050219_1,5127 SUDHL4_400M_050219_1,5127,SQFGGGSQY True True SQFGGGSQY 25.837478 465.701068103313 7507665.5 5125.0 ENSG00000100353|ENST00000216190|EIF3D;;nc|ENSG00000100353|O15371-3|EIF3D 3.951407909393311 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5128 25.851 800.0 132860.0 25 0 6766.6 + + 27541 RLSTPSASTY 10 124 541.7805462466641 1081.5465395601282 2 541.7774536013603 MULTI CID FTMS 0 0 0 5125 114676.625 0.0833937900958778 -15 0.3125076293945312 3 Unmodified _PKVMSVASTY_ ENSG00000104765|ENST00000380629|BNIP3L;nc|ENSG00000104765|O60238-2|BNIP3L 31.26834338654808 0.266153677697784 5 VTASTY 6 -1 51.503 0.0 0.0 4.762 0.0 0.0 441.2281666486344 0.0 441.2281666486344 0.0 24.7074504521148 0.0 0.0 0 1.0 0.0 1.274227503252014 0.0 VTASTY 4.762 - 692 1 2.727 89510.1 0.5799999833106995 1290 3836 5125 SUDHL4_400M_050219_1,5128 SUDHL4_400M_050219_1,5128,PKVMSVASTY False False RLSTPSASTY 25.851311 541.77745360136 2919427.75 5125.0 ENSG00000104765|ENST00000380629|BNIP3L;;nc|ENSG00000104765|O60238-2|BNIP3L 6.685724417368571 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5130 25.856 80.0 883930.0 25 0 130860.0 + -1 LLPCCPAAE 9 90 487.2274198047775 972.440286676355 2 487.2251464724541 MULTI CID FTMS 0 0 0 5129 333270.59375 0.4569613876919245 18 -0.4305286407470703 1 Carbamidomethyl (C) _LLPC(Carbamidomethyl (C))CPAAE_ REV__ENSG00000128159|ENST00000248846|TUBGCP6;REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF;REV__nc|ENSG00000128159|Q96RT7-2|TUBGCP6;REV__nc|ENSG00000128159|Q96RT7-3|TUBGCP6 7.910154910731844 0.6385446671287552 5 {I|L}{I|L}PP 4 -1 40.445 0.0 0.0 4.1592 0.0 0.0 0.0 549.1458223932249 549.1458223932249 28.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}PP 4.1592 - 26 + 1 2.727 61538.1 1.0 1291 3837 5129 SUDHL4_400M_050219_1,5130 SUDHL4_400M_050219_1,5130,LLPCCPAAE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5131 25.861 247.0 208670.0 25 0 15013.0 19164 LEDLMEMLQ 9 88 561.2655703240549 1120.5165877149095 2 561.2664672732353 MULTI CID FTMS 0 0 0 5129 83110.78125 0.4951466396784198 -6 0.1418609619140625 2 Unmodified _LEDLMEMLQ_ ENST00000499137.6_1_12:93960704-93965378:-|nuORF 21.74664581756881 0.2544899275067181 5 {I|L}Q 2 7 28.954 0.0 0.0 2.584 0.0 0.0 861.3627008514317 0.0 861.3627008514317 0.0 13.223418215173195 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3252574989159953 + {I|L}Q 2.584 + + 25 + 1 2.727 43526.0 1.0 1292 3837 5129 SUDHL4_400M_050219_1,5131 SUDHL4_400M_050219_1,5131,LEDLMEMLQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5132 25.865 190.0 213080.0 25 0 17799.0 + 26607 NVPWTRTI 8 83 493.772686058966 985.530819184732 2 493.7724487185478 MULTI CID FTMS 0 0 0 5129 147745.15625 0.0059979667646941 -12 0.2883720397949219 3 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 21.74664581756881 0.5868176546531598 5 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L} 9 -1 + 25.028 0.0 0.0 2.5395 2.5395 80.042 0.0 0.0 0.0 2.152274865413734 11.048115563416731 2.152274865413734 9.030899869919438 0 1.0924778212679485 0.0 0.0 0.0 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L};{[NV]|[RG]}R[NG]VNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GGGT{I|L};{[NV]|[RG]}R[NG]VGGT{I|L};{[NV]|[RG]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}N[VP] 2.5395;1.6231;1.6052;0.68881;0.31523 -;-;-;-;- 126 1 2.727 38510.0 1.0 1293 3837 5129 SUDHL4_400M_050219_1,5132 SUDHL4_400M_050219_1,5132,NVPWTRTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5135 25.873 30.0 2048300.0 25 0 176000.0 + -1 MPKLGKARLI 10 79 571.8576929030158 1141.7008328728316 2 571.8577148318291 MULTI CID FTMS 0 0 0 5134 1551232.625 0.6571071942871171 5 -0.1225624084472656 1 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 13.90604991867851 0.6142120002215601 5 K{I|L}KQPE 6 -1 48.136 0.0 0.0 4.2162 0.0 0.0 400.28035170722814 0.0 400.28035170722814 0.0 40.23123798847138 0.0 0.0 0 0.5 0.0 0.0 0.5 K{I|L}KQPE 4.2162 - 30 1 2.721 50332.0 1.0 1294 3839 5134 SUDHL4_400M_050219_1,5135 SUDHL4_400M_050219_1,5135,MPKLGKARLI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5136 25.88 390.0 287580.0 25 0 38637.0 36977 TFGRGDTGL 9 121 462.2323760933744 922.4501992535488 2 462.2325317263603 MULTI CID FTMS 0 0 0 5134 98878.265625 0.9131630530961958 -2 0.0173454284667968 2 Unmodified _TFGRGDTGL_ ENSG00000142973|ENST00000371923|CYP4B1;nc|ENSG00000142973|P13584|CYP4B1 15.847184025352805 0.4077185912009129 5 [KG]WYEQ{I|L} 7 7 + 21.084 0.0 0.0 2.2856 2.2856 71.999 0.0 0.0 0.0 0.6214790674884441 2.527167426267699 0.6214790674884441 0.6214790674884441 0 0.2742275032520141 0.0 0.0 0.3494850021680094 [KG]WYEQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}QYEQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]YEQ{I|L};[W{M(Oxidation (M))|F}]K{[DS]|[MA]|[CV]|TT}Q{I|L} 2.2856;2.2182;1.2068;0.76089 -;-;-;- 126 1 2.721 87713.3 1.0 1295 3839 5134 SUDHL4_400M_050219_1,5136 SUDHL4_400M_050219_1,5136,TFGRGDTGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5137 25.888 428.0 217340.0 25 0 17728.0 16540 KAVVYVSDIQ 10 113 561.3111417169316 0 561.3109008669853 PEAK CID FTMS 0 0 0 5134 95602.46875 0.2147125686215706 -36 0.7324714660644531 3 Unmodified _KAVVYVSDIQ_ ENSG00000132182|ENST00000254508|NUP210 13.042465956692816 0.351733747982019 5 {I|L}{M(Oxidation (M))|F}GD 4 9 23.933 0.0 0.0 2.1357 0.0 0.0 146.16196755234495 539.2160128229124 685.3779803752573 0.0 0.0 0.0 0.0 0 0.0 0.0 1.579689690656103 0.0 {I|L}{M(Oxidation (M))|F}GD 2.1357 - 107 + 1 2.721 76109.6 1.0 1296 3839 5134 SUDHL4_400M_050219_1,5137 SUDHL4_400M_050219_1,5137,KAVVYVSDIQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5138 25.902 800.0 109130.0 25 0 5854.2 + 44384 YLTHDSPSV 9 152 509.7462231842571 1017.4778934353142 2 509.7458068728447 MULTI CID FTMS 0 0 0 5134 86445.53125 0.6348827148239145 -7 0.1239681243896484 4 Unmodified _YLTHDSPSV_ ENSG00000124562|ENST00000244520|SNRPC 74.42276476219924 0.019389277360085 5 [Y{I|L}][YN]YPSV 8 4 + 57.965 0.0 0.0 5.6969 5.6969 85.762 0.0 0.0 0.0 5.75122469078331 5.75122469078331 5.75122469078331 5.75122469078331 0 1.564909327626439 2.0 0.5994850021680094 0.0 [Y{I|L}][YN]YPSV;[Y{I|L}][HT]DSPSV;[Y{I|L}]{[MG]|[TS]}[HD]PSV;[Y{I|L}]{[MG]|[TS]}C(Carbamidomethyl (C))[Y{I|L}]V;[HD]TS{I|L}YPSV;[HT]DS{I|L}YPSV;[PS]VKCDSPSV;[HD]T[Y{I|L}]SPSV;[HT]D[Y{I|L}]SPSV;[VS]PKCDSPSV 5.6969;5.1317;4.3707;4.1677;4.0807;4.0807;3.5435;3.4788;3.4788;3.4076 -;+;-;-;-;-;-;-;-;- + 629 + 1 2.721 78456.2 0.6399999856948853 1297 3839 5134 SUDHL4_400M_050219_1,5138 SUDHL4_400M_050219_1,5138,YLTHDSPSV True True YLTHDSPSV 25.901838 509.745806872845 664763.3125 5134.0 ENSG00000124562|ENST00000244520|SNRPC 7.708970705668132 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5140 25.907 133.0 495910.0 25 0 109900.0 + 8655 APRHGLQSL 9 79 489.77926180551566 977.5439706778312 2 489.7776061892509 MULTI CID FTMS 0 0 0 5139 257182.953125 0.5128325050079945 6 -0.1176872253417968 1 Unmodified _EVFIASISL_ nc|ENSG00000204469|P48634-3|PRRC2A;ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-4|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A 42.09456458481378 0.0639583784996157 5 {I|L}QS{I|L} 4 6 34.914 0.0 0.0 3.5716 0.0 0.0 518.2723191089613 0.0 518.2723191089613 0.0 18.002873894200047 0.0 0.0 0 0.7887254899964358 0.0 0.5 0.0 {I|L}QS{I|L} 3.5716 - 61 1 2.721 59955.3 1.0 1298 3840 5139 SUDHL4_400M_050219_1,5140 SUDHL4_400M_050219_1,5140,EVFIASISL True False APRHGLQSL 25.907042 489.777606189251 5584104.0 5139.0 nc|ENSG00000204469|P48634-3|PRRC2A;;ENSG00000204469|ENST00000376033|PRRC2A;;nc|ENSG00000204469|P48634-4|PRRC2A;;nc|ENSG00000204469|P48634-2|PRRC2A 7.280532360076904 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5141 25.912 291.0 211710.0 25 0 17392.0 + 30314 RAAPGAEF 8 103 409.7121818785282 817.4098108238564 2 409.7109557986259 MULTI CID FTMS 0 0 0 5139 104050.40625 0.6854603447525154 -6 0.1170902252197265 2 Unmodified _RAAPGAEF_ ENSG00000147140|ENST00000276079|NONO;nc|ENSG00000147140|Q15233-2|NONO 11.640296217721598 0.738950129755968 5 AE{M(Oxidation (M))|F} 3 5 28.188 0.0 0.0 3.4484 0.0 0.0 452.25047499824376 0.0 452.25047499824376 0.0 17.078343878162343 0.0 0.0 0 0.5 0.0 0.0 0.0 + AE{M(Oxidation (M))|F} 3.4484 + + 72 1 2.721 55323.5 1.0 1299 3840 5139 SUDHL4_400M_050219_1,5141 SUDHL4_400M_050219_1,5141,RAAPGAEF False True RAAPGAEF 25.912367 409.710955798626 970081.3125 5139.0 nc|ENSG00000147140|Q15233-2|NONO;;ENSG00000147140|ENST00000276079|NONO 2.0501792828241983 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5142 25.926 800.0 73897.0 25 0 13391.0 -1 0 54 1196.8190498308518 3587.435320092756 3 1197.489306628704 MULTI CID FTMS 0 0 0 5139 89969.203125 0.1598131555484306 -7 0.1388187408447265 3 5 SS 2 -1 12.206 0.0 0.0 0.34025 0.0 0.0 2408.974456910918 1001.3868351370554 3410.3612920479736 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 SS 0.34025 - 13 + 1 2.721 49476.9 0.3600000143051147 1300 3840 5139 SUDHL4_400M_050219_1,5142 SUDHL4_400M_050219_1,5142, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5144 25.932 146.0 279530.0 25 0 36034.0 + 24505 MIMEVADLQ 9 59 525.2540387944683 1048.4935246557366 2 525.2540771365166 MULTI CID FTMS 0 0 0 5143 201587.515625 0.3215138812964542 8 -0.1920738220214843 1 Unmodified _MIMEVADLQ_ REV__ENST00000297591.9_1_8:95508671-95511612:-|nuORF 14.838274106304384 0.4350285940865338 5 {I|L}Q 2 -1 34.024 0.0 0.0 3.245 0.0 0.0 789.3399429680397 0.0 789.3399429680397 0.0 22.59704696843414 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3807196863200844 {I|L}Q 3.245 + + 93 + 1 2.721 39747.6 1.0 1301 3841 5143 SUDHL4_400M_050219_1,5144 SUDHL4_400M_050219_1,5144,MIMEVADLQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5145 25.945 800.0 52581.0 25 0 10038.0 -1 0 45 1081.4504057513857 3241.3293878543573 3 1081.454150378704 MULTI CID FTMS 0 0 0 5143 68038.640625 1.0 0 0.0 2 5 G 1 -1 6.9897 0.0 0.0 0.21564 0.0 0.0 1856.655604265946 1324.6320284479127 3181.287632713859 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21564 - 8 + 1 2.721 40851.6 0.3700000047683716 1302 3841 5143 SUDHL4_400M_050219_1,5145 SUDHL4_400M_050219_1,5145, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5148 25.956 226.0 244110.0 25 0 54228.0 29945 QSLPSRSPPG 10 82 513.2737651068971 1024.5329772805942 2 513.2729980349541 MULTI CID FTMS 0 0 0 5147 120636.2109375 0.4656869471574655 -3 0.0475959777832031 1 Unmodified _QSLPSRSPPG_ ENSG00000088179|ENST00000263708|PTPN4;ENST00000488896.1_1_2:120689943-120692535:+|nuORF 12.240655878213236 0.6421556946785427 5 VVN 3 10 30.942 0.0 0.0 3.0201 0.0 0.0 0.0 709.3302544624879 709.3302544624879 17.447274948966935 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 VVN 3.0201 - 140 1 2.721 46848.0 1.0 1303 3843 5147 SUDHL4_400M_050219_1,5148 SUDHL4_400M_050219_1,5148,QSLPSRSPPG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5149 25.97 800.0 139870.0 25 0 12696.0 + -1 RAVAPTMSL 9 154 481.2584709635781 960.5023889939562 2 481.2605468630791 MULTI CID FTMS 0 0 0 5147 46463.5 0.3259506772352094 -8 0.1342353820800781 2 Oxidation (M) _RAVAPTM(Oxidation (M))SL_ nc|ENSG00000144560|Q14135-4|VGLL4;nc|ENSG00000144560|Q14135-5|VGLL4;nc|ENSG00000144560|Q14135|VGLL4;nc|ENSG00000144560|Q14135-2|VGLL4;nc|ENSG00000144560|Q14135-6|VGLL4;ENSG00000144560|ENST00000430365|VGLL4 30.63653989081413 0.1413794767160703 5 [Q{I|L}]RTP{M(Oxidation (M))|F}S{I|L} 8 -1 [Q{I|L}]RTP{M(Oxidation (M))|F} + + 22.251 8.9605 1.207 2.3166 2.3166 53.203 0.0 0.0 0.0 0.0 8.08496193901809 0.0 0.0 0 0.4247425010840047 0.0 0.3054621874040891 0.0 [Q{I|L}]RTP{M(Oxidation (M))|F}S{I|L} 2.3166 - 344 + 1 2.721 86734.7 0.5899999737739563 1304 3843 5147 SUDHL4_400M_050219_1,5149 SUDHL4_400M_050219_1,5149,RAVAPTMSL False False RAVAPTMSL 25.970011 481.260546863079 1197483.125 5147.0 nc|ENSG00000144560|Q14135-4|VGLL4;;nc|ENSG00000144560|Q14135-5|VGLL4;;nc|ENSG00000144560|Q14135|VGLL4;;nc|ENSG00000144560|Q14135-2|VGLL4;;nc|ENSG00000144560|Q14135-6|VGLL4;;ENSG00000144560|ENST00000430365|VGLL4 4.071320374806722 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5150 25.977 411.0 198800.0 25 0 21532.0 + 39771 VEPATPVSVP 10 108 498.27384081959104 994.533128705982 2 498.2741271853447 MULTI CID FTMS 0 0 0 5147 112439.84375 1.0 0 0.0 3 Unmodified _VEPATPVSVP_ REV__ENSG00000187323|ENST00000442544|DCC;REV__ENST00000579702.1_1_18:51025702-51053171:+|nuORF 25.399314129420983 0.3980215340001851 5 [{I|L}T]SPV[PG][DP]{I|L} 10 -1 + 44.715 0.0 0.0 4.4961 4.4961 76.989 0.0 0.0 0.0 29.23061874357608 0.4626593516915278 0.4626593516915278 0.9948500216800936 0 0.805462187404089 2.0 0.3807196863200844 0.0 [{I|L}T]SPV[PG][DP]{I|L};[{I|L}T]E[PG]VPSPV;[{I|L}T]SPV[PG]EPV;[{I|L}T][KA]{M(Oxidation (M))|F}[RP]Y;[{I|L}T]N[TA][{I|L}T]VY;[{I|L}T][KA]{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]{I|L};[{I|L}T][Q{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VY;[{I|L}T]N[{I|L}A][HM]PV;[{I|L}T][HM][{I|L}A]NPV;[{I|L}T][HM][{I|L}A]VPN 4.4961;4.3961;4.3364;2.516;2.1765;2.0362;1.7207;1.2492;1.1895;1.1068 -;-;-;-;-;-;-;-;-;- 961 + 1 2.721 68884.4 1.0 1305 3843 5147 SUDHL4_400M_050219_1,5150 SUDHL4_400M_050219_1,5150,VEPATPVSVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5151 25.991 800.0 75702.0 25 0 15217.0 + 2819 AVAAGPEPA 9 60 782.404878790353 781.397602323753 1 782.4053832888603 MULTI CID FTMS 0 0 0 5147 79631.3828125 1.0 0 0.0 4 Unmodified _AVAAGPEPA_ ENSG00000130699|ENST00000252996|TAF4 48.345845343767074 0.0439967357579942 5 [EP][VS]GAA 7 7 43.02 0.0 0.0 5.5055 0.0 0.0 0.0 167.0823306775217 167.0823306775217 26.71217512704725 0.0 0.0 0.0 0 0.7302046884880937 1.3979400086720375 0.2742275032520141 0.0 [EP][VS]GAA 5.5055 - 177 1 2.721 52471.9 0.5699999928474426 1306 3843 5147 SUDHL4_400M_050219_1,5151 SUDHL4_400M_050219_1,5151,AVAAGPEPA True False AVAAGPEPA 25.991187 782.40538328886 400103.15625 5147.0 ENSG00000130699|ENST00000252996|TAF4 -0.1615064938863118 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5153 25.998 210.0 338720.0 25 0 23088.0 + 2678 ATDPTIHTV 9 121 477.7482372105651 953.4819214879302 2 477.7480346560478 MULTI CID FTMS 0 0 0 5152 282951.03125 0.4144590780369805 9 -0.2558231353759765 1 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 42.09456458481378 0.0639583784996157 5 [TA]DV 4 5 31.242 0.0 0.0 3.2766 0.0 0.0 0.0 564.2763155572874 564.2763155572874 7.231975075880328 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 [TA]DV 3.2766 - 268 + 1 2.721 58775.1 1.0 1307 3844 5152 SUDHL4_400M_050219_1,5153 SUDHL4_400M_050219_1,5153,ATDPTIHTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5154 25.999 45.0 923320.0 25 0 145010.0 + -1 YDESGMNH 8 51 484.6753042146454 967.3360554960908 2 484.6750671267509 MULTI CID FTMS 0 0 0 5152 964934.1875 1.0 0 0.0 2 Oxidation (M) _YDESGM(Oxidation (M))NH_ REV__ENSG00000133863|ENST00000643185|TEX15;REV__nc|ENSG00000133863|Q9BXT5|TEX15 2.302733041254933 0.8103549651115762 5 {M(Oxidation (M))|F} 1 -1 12.764 0.0 0.0 1.3195 0.0 0.0 802.2896362839799 0.0 802.2896362839799 0.0 8.160116073527028 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3195 + + 7 + 1 2.721 41253.0 1.0 1308 3844 5152 SUDHL4_400M_050219_1,5154 SUDHL4_400M_050219_1,5154,YDESGMNH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5155 26.001 88.0 574470.0 25 0 41583.0 + -1 DVKCPDME 8 101 476.69250770319536 951.3704624731909 2 476.6923400759697 MULTI CID FTMS 0 0 0 5152 393015.21875 1.0 0 0.0 3 Oxidation (M) _DVKCPDM(Oxidation (M))E_ REV__ENSG00000067646|ENST00000155093|ZFY;REV__nc|ENSG00000067646|P08048-2|ZFY;REV__nc|ENSG00000067646|P08048-3|ZFY 5.230669730166228 0.792582437072536 5 {[QS]|[NT]}Y 3 -1 17.029 0.0 0.0 1.7899 0.0 0.0 0.0 570.194473053522 570.194473053522 2.899269015205343 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.2302046884880938 {[QS]|[NT]}Y 1.7899 - 194 1 2.721 45623.1 1.0 1309 3844 5152 SUDHL4_400M_050219_1,5155 SUDHL4_400M_050219_1,5155,DVKCPDME False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5157 26.006 44.0 1036200.0 25 0 82738.0 + 13046 HAVGPSTSL 9 73 434.7301332671909 867.4457136011819 2 434.7297851443291 MULTI CID FTMS 0 0 0 5156 1320729.375 0.8346443151863954 4 -0.1174850463867187 1 Unmodified _HAVGPSTSL_ ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12 40.44857923139169 0.0729940656229577 5 [HV]TPNTS{I|L} 8 3 + 36.705 0.0 0.0 4.2313 4.2313 81.318 0.0 0.0 0.0 5.674304145749133 16.0697580801237 5.674304145749133 5.841671119825666 0 0.3182503180159344 0.0 0.2887254899964357 0.0 [HV]TPNTS{I|L};[YR]D[KS]S{I|L} 4.2313;3.5579 -;- 83 + 1 2.721 43159.4 1.0 1310 3845 5156 SUDHL4_400M_050219_1,5157 SUDHL4_400M_050219_1,5157,HAVGPSTSL True True HAVGPSTSL 26.005535 434.729785144329 20845930.0 5156.0 nc|ENSG00000140262|Q99081-4|TCF12;;nc|ENSG00000140262|Q99081|TCF12;;nc|ENSG00000140262|Q99081-2|TCF12;;ENSG00000140262|ENST00000333725|TCF12 7.232324282328288 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5158 26.02 800.0 180080.0 25 0 11549.0 26046 NMLVTNFWMST 11 134 672.3096308444025 1342.6047087556049 2 672.3112060427666 MULTI CID FTMS 0 0 0 5156 84408.3046875 0.1571575247937452 -5 0.0989532470703125 2 Unmodified _NMLVTNFWMST_ ENSG00000066405|ENST00000183605|CLDN18;nc|ENSG00000066405|P56856-2|CLDN18 11.494710602746466 0.7960433852372589 5 [MN]PN{I|L}NADQ 9 8 91.128 0.0 0.0 6.7874 0.0 0.0 0.0 342.1529635065063 342.1529635065063 55.64877582166263 0.0 0.0 0.0 0 0.9947026752325154 1.5228787452803376 0.0 2.071333751784365 [MN]PN{I|L}NADQ 6.7874 - 3965 + 1 2.721 105542.8 0.5099999904632568 1311 3845 5156 SUDHL4_400M_050219_1,5158 SUDHL4_400M_050219_1,5158,NMLVTNFWMST False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5160 26.025 158.0 257040.0 25 0 61173.0 + 42180 VSDSGAHVL 9 70 442.7272520217815 883.439951110363 2 442.7272521853447 MULTI CID FTMS 0 0 0 5159 242137.953125 0.384353545273364 8 -0.2583160400390625 1 Unmodified _VSDSGAHVL_ ENSG00000064102|ENST00000261191|INTS13 26.88365393820708 0.1891292719743517 5 VSD{[QS]|[NT]}HV{I|L} 8 2 + 58.37 0.0 0.0 6.6071 6.6071 94.483 0.0 0.0 0.0 46.94283241038235 5.617063521379961 5.617063521379961 22.37888070366388 0 1.1237125054200234 2.0 0.0 0.0 VSD{[QS]|[NT]}HV{I|L};VSQQ[Y{M(Oxidation (M))|F}]{I|L};VS[YK][YG][PA];V[W{M(Oxidation (M))|F}][HQ][PA];[PA][KA]{[QS]|[NT]}D[PA] 6.6071;4.0739;3.0114;0.90915;0.13887 -;-;-;-;- 137 + 1 2.721 40142.8 1.0 1312 3846 5159 SUDHL4_400M_050219_1,5160 SUDHL4_400M_050219_1,5160,VSDSGAHVL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5161 26.039 800.0 143870.0 25 0 9882.0 31449 RPQSNWKESAN 11 138 658.8204954674283 1315.6264380016564 2 658.8199951052666 MULTI CID FTMS 0 0 0 5159 216193.1875 0.3125859667865137 6 -0.1919612884521484 2 Unmodified _RPQSNWKESAN_ ENSG00000197077|ENST00000358431|KIAA1671 33.4449034751529 0.3133739643825231 5 DPS[WK]PSQSAN 11 6 93.912 0.0 0.0 7.1382 0.0 0.0 100.06433303047032 0.0 100.06433303047032 0.0 62.03965781130346 0.0 0.0 0 1.6861818737241734 0.0 3.2416440611282624 0.6989700043360187 DPS[WK]PSQSAN 7.1382 - 3963 1 2.721 85416.2 0.8999999761581421 1313 3846 5159 SUDHL4_400M_050219_1,5161 SUDHL4_400M_050219_1,5161,RPQSNWKESAN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5162 26.045 352.0 181000.0 25 0 17866.0 + 35313 SSSERGNWIQ 10 93 582.275708085892 1162.536863238584 2 582.2744628787041 MULTI CID FTMS 0 0 0 5159 151423.6875 0.3842922587945604 -4 0.0740718841552734 3 Unmodified _SSSERGNWIQ_ ENST00000355327.7_2_15:71389306-71507474:+|nuORF 32.78568957990786 0.2337485590374503 5 D{[QG]|[NA]}G{M(Oxidation (M))|F}{I|L}Q 7 7 40.934 0.0 0.0 3.5211 0.0 0.0 399.18712050605626 0.0 399.18712050605626 0.0 27.122213499699868 0.0 0.0 0 1.0 0.0 0.0 0.6989700043360187 D{[QG]|[NA]}G{M(Oxidation (M))|F}{I|L}Q 3.5211 - 124 1 2.721 52085.7 1.0 1314 3846 5159 SUDHL4_400M_050219_1,5162 SUDHL4_400M_050219_1,5162,SSSERGNWIQ False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5163 26.057 688.0 228630.0 25 0 21627.0 + 37410 TLAQRVKEV 9 159 522.3134769291684 1042.6124009251366 2 522.3134033083916 MULTI CID FTMS 0 0 0 5159 92268.3984375 0.4824483538425591 -4 0.0740718841552734 4 Unmodified _TLAQRVKEV_ ENSG00000115307|ENST00000377526|AUP1;ENST00000462297.1_1_2:74754523-74754670:-|nuORF;ENST00000463900.5_1_2:74753929-74756164:-|nuORF;ENST00000466894.5_1_2:74754206-74756164:-|nuORF;ENST00000486234.1_1_2:74754275-74754965:-|nuORF;nc|ENSG00000115307|Q9Y679-3|AUP1 59.05245873256422 0.0266066919017776 5 T{I|L}AQRVKEV 9 0 + 73.952 0.0 0.0 7.0929 7.0929 89.3 0.0 0.0 0.0 23.85303634249773 5.821867561873503 5.821867561873503 5.821867561873503 0 2.011922997584469 2.0 1.079689690656103 0.3807196863200844 + + T{I|L}AQRVKEV;T{I|L}AQRVKD{I|L};T{I|L}A[AG]RVKEV;T{I|L}A[AG]RVKD{I|L};T{I|L}V{M(Oxidation (M))|F}{I|L}{I|L}{I|L}PQ;[{I|L}T]A{I|L}{I|L}A{M(Oxidation (M))|F}VPV;[{I|L}T]AA{I|L}{I|L}{M(Oxidation (M))|F}VPV;T{I|L}V{M(Oxidation (M))|F}{I|L}{I|L}{I|L}QP;T{I|L}V{I|L}{I|L}{M(Oxidation (M))|F}{I|L}PQ;[{I|L}T]AAGRVKEV 7.0929;6.5345;6.2098;5.6514;5.0959;4.8051;4.7122;4.6043;4.5185;4.4538 +;-;-;-;-;-;-;-;-;- + 1123 + 1 2.721 122809.4 1.0 1315 3846 5159 SUDHL4_400M_050219_1,5163 SUDHL4_400M_050219_1,5163,TLAQRVKEV True True TLAQRVKEV 26.057318 522.313403308392 858769.4375 5159.0 ENST00000466894.5_1_2:74754206-74756164:-|nuORF;;ENST00000486234.1_1_2:74754275-74754965:-|nuORF;;ENST00000463900.5_1_2:74753929-74756164:-|nuORF;;nc|ENSG00000115307|Q9Y679-3|AUP1;;ENST00000462297.1_1_2:74754523-74754670:-|nuORF;;ENSG00000115307|ENST00000377526|AUP1 6.1123379071553545 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5165 26.062 37.0 1302000.0 25 0 337110.0 + 18200 KVAPAPAVV 9 61 426.2712931935252 850.5280334538504 2 426.2710143923759 MULTI CID FTMS 0 0 0 5164 1680845.25 0.7873759276877825 1 -0.0258350372314453 1 Unmodified _KVAPAPAVV_ ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF 21.74664581756881 0.2544899275067181 5 [PA]V[KA]PAVV 9 4 + 45.366 0.0 0.0 5.3338 5.3338 86.149 0.0 0.0 0.0 4.762036441594191 29.881062318217104 4.762036441594191 8.023787536356572 0 0.8252574989159953 0.0 0.0 0.0 [PA]V[KA]PAVV;[PA][PA]VKAVV;[PA]V[PA]KAVV;[PA][PA]VAKVV;[PA][PA]AVKVV;[PA]V[PA]AKVV 5.3338;4.3904;4.3904;4.0365;4.0365;4.0365 -;-;-;-;-;- 110 1 2.721 45733.4 1.0 1316 3847 5164 SUDHL4_400M_050219_1,5165 SUDHL4_400M_050219_1,5165,KVAPAPAVV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5166 26.076 800.0 177390.0 25 0 11570.0 40023 VGEWKNDKRS 10 143 609.8148725833958 1217.6151922335914 2 609.8140746951103 MULTI CID FTMS 0 0 0 5164 161600.53125 0.7430239359764679 -3 0.0658226013183593 2 Unmodified _VGEWKNDKRS_ ENSG00000154118|ENST00000284262|JPH3 14.838274106304384 0.5985701837916485 5 [VG]Q[WK]DPSQS 10 5 73.822 0.0 0.0 6.0628 0.0 0.0 0.0 102.05882063294273 102.05882063294273 60.72305411414966 0.0 0.0 0.0 0 0.8807196863200843 1.154901959985743 1.610924374808178 1.274227503252014 [VG]Q[WK]DPSQS 6.0628 - 1547 1 2.721 108354.4 0.5400000214576721 1317 3847 5164 SUDHL4_400M_050219_1,5166 SUDHL4_400M_050219_1,5166,VGEWKNDKRS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5167 26.083 419.0 143800.0 25 0 11980.0 -1 0 94 604.9580644322507 1811.852363896952 3 604.9568359255791 MULTI CID FTMS 0 0 0 5164 88456.078125 0.2644215885616002 -4 0.1076068878173828 3 5 GSGGS 5 -1 31.855 0.0 0.0 1.7581 0.0 0.0 842.3987911538719 621.2999971979124 1463.6987883517843 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 GSGGS 1.7581 - 74 + 1 2.721 53405.8 1.0 1318 3847 5164 SUDHL4_400M_050219_1,5167 SUDHL4_400M_050219_1,5167, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5169 26.088 13.0 4749800.0 25 0 377200.0 + 26455 NTIDPSHPM 9 77 506.23177559675577 1010.4489982603116 2 506.2319213747978 MULTI CID FTMS 0 0 0 5168 5248262.0 0.5596200148001869 -4 0.0916576385498046 1 Unmodified _NTIDPSHPM_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 52.268347100219714 0.0353964759249114 5 {[QS]|[NT]}{I|L}DPSH{NN|[MP]|[D{I|L}]|[EV]} 9 0 + 67.585 0.0 0.0 6.6886 6.6886 94.166 0.0 0.0 0.0 38.50501891384965 9.137342758552691 9.137342758552691 16.22486274231747 0 0.6989700043360187 2.0 0.7742275032520141 0.0 + + {[QS]|[NT]}{I|L}DPSH{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}{I|L}D[YT]G{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}[{M(Oxidation (M))|F}V]{I|L}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}[YT]DG{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}[YT]{I|L}DG{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}[{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}V]G{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}[{M(Oxidation (M))|F}V][R{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}[YT]{[RE]|[WV]}{NN|[MP]|[D{I|L}]|[EV]} 6.6886;5.0829;4.6796;4.4871;2.959;2.8213;2.4781;1.6539 +;-;-;-;-;-;-;- + 260 + 1 2.721 51949.7 1.0 1319 3848 5168 SUDHL4_400M_050219_1,5169 SUDHL4_400M_050219_1,5169,NTIDPSHPM True True NTIDPSHPM 26.08762 506.231921374798 335773000.0 5168.0 nc|ENSG00000090861|P49588-2|AARS1;;ENSG00000090861|ENST00000261772|AARS1 7.351792971293132 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5170 26.089 77.0 935780.0 25 0 110870.0 + 6389 DWAKLIKRL 9 83 381.5740135422 1141.7002112268 3 381.5740539431572 MULTI CID FTMS 0 0 0 5168 696677.5625 0.047075861846444 14 -0.4940605163574219 2 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 11.494710602746466 0.5255349189887087 5 K{I|L}K[QP]E 6 -1 25.406 0.0 0.0 2.2253 0.0 0.0 400.2806568830094 0.0 400.2806568830094 0.0 13.812281309285623 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.2253 - 43 1 2.721 60771.1 1.0 1320 3848 5168 SUDHL4_400M_050219_1,5170 SUDHL4_400M_050219_1,5170,DWAKLIKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5171 26.094 222.0 256670.0 25 0 25195.0 -1 VLFVEDGKME 10 74 591.7903171271319 1181.5660813210636 2 591.7899658083916 MULTI CID FTMS 0 0 0 5168 194476.671875 0.238196673925443 15 -0.525543212890625 3 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 19.361941925380144 0.5226674314761524 5 GK[{M(Oxidation (M))|F}E] 4 -1 32.92 0.0 0.0 2.7861 0.0 0.0 702.3666011958668 0.0 702.3666011958668 0.0 25.929862658764264 0.0 0.0 0 1.5 0.0 0.9247425010840048 0.0 GK[{M(Oxidation (M))|F}E] 2.7861 + + 99 + 1 2.721 48715.0 1.0 1321 3848 5168 SUDHL4_400M_050219_1,5171 SUDHL4_400M_050219_1,5171,VLFVEDGKME False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5172 26.105 637.0 142210.0 25 0 8178.4 + -1 MDVFEDFV 8 138 509.21741867405416 1016.4202844149085 2 509.2176086306572 MULTI CID FTMS 0 0 0 5168 86148.1328125 0.2581729457208836 -7 0.1566734313964843 4 Oxidation (M) _M(Oxidation (M))DVFEDFV_ REV__ENSG00000204394|ENST00000375663|VARS1;REV__ENST00000461328.1_1_6:31750434-31752201:-|nuORF;REV__nc|ENSG00000204394|P26640-2|VARS1 14.581692164780916 0.6954967302934248 5 [AG]SS 4 -1 24.673 0.0 0.0 2.4275 0.0 0.0 0.0 711.2741411866458 711.2741411866458 4.724959626282626 0.0 0.0 0.0 0 0.0 2.0 0.5891368308784531 0.0 [AG]SS 2.4275 - 414 1 2.721 70930.6 1.0 1322 3848 5168 SUDHL4_400M_050219_1,5172 SUDHL4_400M_050219_1,5172,MDVFEDFV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5173 26.119 800.0 57885.0 25 0 12012.0 -1 0 39 1172.4720826176294 3514.3944184530883 3 1173.134204089642 MULTI CID FTMS 0 0 0 5168 80953.1171875 0.1939788705658732 -5 0.1334419250488281 5 5 {M(Oxidation (M))|F}GH 3 -1 11.682 0.0 0.0 0.33242 0.0 0.0 2000.7038189431264 1169.5134981744752 3170.2173171176014 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}GH 0.33242 - 11 + 1 2.721 45147.0 0.4000000059604645 1323 3848 5168 SUDHL4_400M_050219_1,5173 SUDHL4_400M_050219_1,5173, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5175 26.123 2.5 16515000.0 25 0 835970.0 + 26608 NVPWTRTI 8 79 493.772686058966 985.530819184732 2 493.7729369997978 MULTI CID FTMS 0 0 0 5174 24632540.0 1.0 0 0.0 1 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 25.399314129420983 0.5099049743284904 5 {[NV]|[RG]}RNVGNT{I|L} 9 -1 + 60.851 0.0 0.0 6.1745 6.1745 90.426 0.0 0.0 0.0 4.137342758552691 40.4633332150681 4.137342758552691 9.208187539523747 0 0.9247425010840048 0.0 0.0 0.0 {[NV]|[RG]}RNVGNT{I|L};{[NV]|[RG]}RGGVGNT{I|L};{[NV]|[RG]}RNVGGGT{I|L};{[NV]|[RG]}RGGVGGGT{I|L};{[NV]|[RG]}R[PA]{[ES]|[DT]|[{I|L}C]}T{I|L};{[NV]|[RG]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}{I|L}N[VP] 6.1745;5.2401;5.2401;4.3102;2.3693;0.36439 -;-;-;-;-;- 201 1 2.7 41169.5 1.0 1324 3849 5174 SUDHL4_400M_050219_1,5175 SUDHL4_400M_050219_1,5175,NVPWTRTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5176 26.125 93.0 526070.0 25 0 44863.0 + 34812 SQFGGGSQY 9 89 465.70158601148273 929.3886190897656 2 465.7013427615166 MULTI CID FTMS 0 0 0 5174 550380.1875 0.3027489108224118 3 -0.093210220336914 2 Unmodified _SQFGGGSQY_ ENSG00000100353|ENST00000216190|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 19.256988751693697 0.3154191944385105 5 HY 2 8 17.474 0.0 0.0 1.8802 0.0 0.0 611.2543550290218 0.0 611.2543550290218 0.0 0.945443658194236 0.0 0.0 0 0.0 0.0 0.0 0.0 HY 1.8802 - 191 + 1 2.7 45309.3 1.0 1325 3849 5174 SUDHL4_400M_050219_1,5176 SUDHL4_400M_050219_1,5176,SQFGGGSQY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5178 26.13 68.0 818610.0 25 0 99159.0 12501 GVDNAFLIAY 10 96 541.7805462466641 1081.5465395601282 2 541.7805663943291 MULTI CID FTMS 0 0 0 5177 1016503.1875 0.7392095246103186 -1 0.0064849853515625 1 Unmodified _GVDNAFLIAY_ ENSG00000134955|ENST00000403796|SLC37A2;ENST00000526405.5_1_11:124933263-124955028:+|nuORF;nc|ENSG00000134955|Q8TED4-2|SLC37A2;nc|ENSG00000134955|Q8TED4-3|SLC37A2 34.40172386719151 0.2166836008404837 5 AEAY 4 7 48.175 0.0 0.0 4.4543 0.0 0.0 629.3582803240296 0.0 629.3582803240296 0.0 34.987737688117235 0.0 0.0 0 1.0 0.0 0.7742275032520141 0.0 AEAY 4.4543 - 181 1 2.7 47534.3 1.0 1326 3850 5177 SUDHL4_400M_050219_1,5178 SUDHL4_400M_050219_1,5178,GVDNAFLIAY False True KMKEIAEAY 26.129505 541.780566394329 8262577.375 5177.0 ENSG00000109971|ENST00000534624|HSPA8;;ENSG00000126803|ENST00000247207|HSPA2;;nc|ENSG00000109971|P11142-2|HSPA8;;ENSG00000204388|ENST00000375650|HSPA1B;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENSG00000204389|ENST00000375651|HSPA1A;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 3.210902531941732 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5179 26.132 141.0 346100.0 25 0 22158.0 + -1 RLMNDMTAV 9 91 533.7537575819979 1065.4929622307957 2 533.7546874880791 MULTI CID FTMS 0 0 0 5177 301562.4375 0.8634868986192797 -1 0.0064849853515625 2 Oxidation (M) _RLMNDM(Oxidation (M))TAV_ nc|ENSG00000120694|Q92598-4|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1 18.1463463914782 0.3454829746528889 5 {[TV]|[{I|L}S]}{[TV]|[{I|L}S]}ND{M(Oxidation (M))|F}TAV 10 -1 + 47.853 0.0 0.0 4.4912 4.4912 84.6 0.0 0.0 0.0 15.56637088460353 33.249256301612746 15.56637088460353 9.164539485499247 0 0.6989700043360187 2.0 0.5 0.0 {[TV]|[{I|L}S]}{[TV]|[{I|L}S]}ND{M(Oxidation (M))|F}TAV;{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}GGD{M(Oxidation (M))|F}TAV;{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}ND{M(Oxidation (M))|F}G[{I|L}T];{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}GGD{M(Oxidation (M))|F}G[{I|L}T];[TA]{[ES]|[DT]|[{I|L}C]}[Q{I|L}]{M(Oxidation (M))|F}TAV;[DN]{I|L}{[WT]|[RM]}{M(Oxidation (M))|F}TAV;{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}ND[YG]TP;{[SA]|[TG]}{[ET]|[MV]}[Q{I|L}]{M(Oxidation (M))|F}TAV;{[VA]|[{I|L}G]}[DG]{[WT]|[RM]}{M(Oxidation (M))|F}TAV;[TA]{[ES]|[DT]|[{I|L}C]}[Q{I|L}]{M(Oxidation (M))|F}G[{I|L}T] 4.4912;3.6311;3.0834;2.2233;2.1926;2.1663;1.7461;0.87167;0.79149;0.78484 -;-;-;-;-;-;-;-;-;- 156 1 2.7 42697.6 1.0 1327 3850 5177 SUDHL4_400M_050219_1,5179 SUDHL4_400M_050219_1,5179,RLMNDMTAV False False RLMNDMTAV 26.132351 533.754687488079 1782767.625 5177.0 nc|ENSG00000120694|Q92598-4|HSPH1;;nc|ENSG00000120694|Q92598-2|HSPH1;;ENSG00000120694|ENST00000320027|HSPH1;;nc|ENSG00000120694|Q92598-3|HSPH1 7.047342459360759 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5180 26.134 91.0 679980.0 25 0 135470.0 + -1 LLPCCPAAE 9 73 487.2274198047775 972.440286676355 2 487.2263061404228 MULTI CID FTMS 0 0 0 5177 320229.875 0.4390807074031311 31 -0.8876571655273438 3 Carbamidomethyl (C) _LLPC(Carbamidomethyl (C))CPAAE_ REV__ENSG00000128159|ENST00000248846|TUBGCP6;REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF;REV__nc|ENSG00000128159|Q96RT7-2|TUBGCP6;REV__nc|ENSG00000128159|Q96RT7-3|TUBGCP6 7.910154910731844 0.6385446671287552 5 {I|L}{I|L}PP 4 -1 40.445 0.0 0.0 4.1592 0.0 0.0 0.0 549.1449679010374 549.1449679010374 27.971062485323515 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}PP 4.1592 - 20 + 1 2.7 56159.5 1.0 1328 3850 5177 SUDHL4_400M_050219_1,5180 SUDHL4_400M_050219_1,5180,LLPCCPAAE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5181 26.137 112.0 454700.0 25 0 53487.0 -1 NTIDPSHPM 9 86 514.2287488988064 1026.4429448644128 2 514.2286865115166 MULTI CID FTMS 0 0 0 5177 208420.578125 0.7321565440459203 -3 0.0677204132080078 4 Oxidation (M) _NTIDPSHPM(Oxidation (M))_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 26.88365393820708 0.1891292719743517 5 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}] 8 -1 + 55.239 0.0 0.0 5.3816 5.3816 89.59 0.0 0.0 0.0 36.71729172591576 3.055074169904444 3.055074169904444 10.4972646727866 0 0.3807196863200844 2.0 0.3807196863200844 0.0 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}D[C(Carbamidomethyl (C))K]NY;{[QS]|[NT]}{I|L}D[C(Carbamidomethyl (C))K]GGY;{[QS]|[NT]}{[{M(Oxidation (M))|F}D]|MM}{I|L}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}[YE][TP][R{M(Oxidation (M))|F}] 5.3816;4.3589;3.4566;2.6539;1.3572 -;-;-;-;- 106 + 1 2.7 45548.2 1.0 1329 3850 5177 SUDHL4_400M_050219_1,5181 SUDHL4_400M_050219_1,5181,NTIDPSHPM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5182 26.144 410.0 188760.0 25 0 13076.0 + 12262 GQYSTGKTTF 10 114 545.2652213406967 1088.515889748193 2 545.2637206912041 MULTI CID FTMS 0 0 0 5177 123830.109375 0.376914456960816 -2 0.0418853759765625 5 Unmodified _GQYSTGKTTF_ EHD1|p.T93Pfs*111|1|0.12|ENSG00000110047|chr11:64878189-64878189|G/-|frameshift_variant;ENSG00000013016|ENST00000322054|EHD3;ENSG00000103966|ENST00000220325|EHD4;ENSG00000110047|ENST00000320631|EHD1;ENST00000569223.1_1_15:42235208-42264692:-|nuORF;nc|ENSG00000013016|Q9NZN3-2|EHD3 28.49450938151212 0.328477364964909 5 {[QG]|[NA]}YST 5 5 37.329 0.0 0.0 3.4293 0.0 0.0 0.0 549.2689303033811 549.2689303033811 11.19693889373682 0.0 0.0 0.0 0 1.0 0.5528419686577808 0.3807196863200844 0.0 + {[QG]|[NA]}YST 3.4293 + + 508 + 1 2.7 67612.3 1.0 1330 3850 5177 SUDHL4_400M_050219_1,5182 SUDHL4_400M_050219_1,5182,GQYSTGKTTF False True GQYSTGKTTF 26.144053 545.263720691204 1477155.0 5177.0 ENST00000569223.1_1_15:42235208-42264692:-|nuORF;;nc|ENSG00000013016|Q9NZN3-2|EHD3;;ENSG00000103966|ENST00000220325|EHD4;;ENSG00000013016|ENST00000322054|EHD3;;EHD1|p.T93Pfs*111|1|0.12|ENSG00000110047|chr11:64878189-64878189|G/-|frameshift_variant;;ENSG00000110047|ENST00000320631|EHD1 6.278603871663411 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5183 26.158 800.0 124410.0 25 0 7207.3 26051 NMPKFDSLWDY 11 105 708.3198121707378 1414.6250714082755 2 708.8203002810478 MULTI CID FTMS 0 0 0 5177 96941.375 0.5409448544285256 -1 0.0064849853515625 6 Unmodified _NMPKFDSLWDY_ ENSG00000197928|ENST00000598513|ZNF677 11.494710602746466 0.7960433852372589 5 [MN]PN{I|L}NEEQMVP 12 9 + 86.007 0.0 0.0 6.0798 6.0798 88.354 0.0 0.0 0.0 60.05932705901364 7.1400125535309655 7.1400125535309655 8.239087409443187 0 0.6694451763165201 1.5228787452803376 0.0 1.2302046884880935 [MN]PN{I|L}NEEQMVP;[MN]PN{I|L}NEEQP{[ET]|[MV]};[MN]PN{I|L}NEE[AG]MVP;[MN]PN{I|L}GGEEQMVP;[MN]PGG{I|L}NEEQMVP;[MN]PN{I|L}[DG]AEQMVP;[MN]PN{I|L}NEE{[NV]|[RG]}{[QN]|[E{I|L}]|[KN]};[MN]PGG{I|L}NEEQP{[ET]|[MV]};[MN]PN{I|L}GGEEQP{[ET]|[MV]};[MN]PN{I|L}NEE[AG]P{[ET]|[MV]} 6.0798;5.4974;5.4367;5.4367;5.4367;5.0111;4.8986;4.8542;4.8542;4.8542 -;-;-;-;-;-;-;-;-;- 1260 + 1 2.7 74781.3 0.5699999928474426 1331 3850 5177 SUDHL4_400M_050219_1,5183 SUDHL4_400M_050219_1,5183,NMPKFDSLWDY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5184 26.172 800.0 158050.0 25 0 45724.0 + -1 MPKLGKARLI 10 130 571.8576929030158 1141.7008328728316 2 571.8572875857353 MULTI CID FTMS 0 0 0 5177 93923.640625 0.0397863601974753 16 -0.4996814727783203 7 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 6.2057823575117 0.6979311171683138 5 K{I|L}KQPE 6 -1 35.182 0.0 0.0 3.0815 0.0 0.0 400.2812061994157 0.0 400.2812061994157 0.0 22.06054482433124 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 K{I|L}KQPE 3.0815 - 132 1 2.7 100071.0 0.5400000214576721 1332 3850 5177 SUDHL4_400M_050219_1,5184 SUDHL4_400M_050219_1,5184,MPKLGKARLI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5186 26.188 800.0 116150.0 25 0 28130.0 -1 0 41 1196.8190498308518 3587.435320092756 3 1197.486132800579 MULTI CID FTMS 0 0 0 5185 239600.96875 0.425605491194556 4 -0.110391616821289 1 5 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.30576 0.0 0.0 2000.6923524187305 1379.633652074613 3380.326004493343 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.30576 - 20 + 1 2.7 83453.4 0.9100000262260436 1333 3851 5185 SUDHL4_400M_050219_1,5186 SUDHL4_400M_050219_1,5186, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5187 26.19 82.0 535890.0 25 0 34125.0 34953 SQKSLWNY 8 92 513.2569592372746 1024.499365541349 2 513.2568847537041 MULTI CID FTMS 0 0 0 5185 427169.40625 1.0 0 0.0 2 Unmodified _SQKSLWNY_ ENSG00000122728|ENST00000242310|TAF1L;ENSG00000147133|ENST00000423759|TAF1;ENST00000483365.1_1_X:70596867-70597689:+|nuORF;nc|ENSG00000147133|P21675-1|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-23|TAF1;nc|ENSG00000147133|P21675-24|TAF1;nc|ENSG00000147133|P21675-25|TAF1;nc|ENSG00000147133|P21675|TAF1 16.942295170755138 0.6606234159769251 5 {I|L}D[C(Carbamidomethyl (C))K]NY 6 5 33.901 0.0 0.0 3.309 0.0 0.0 213.1454359532616 0.0 213.1454359532616 0.0 25.507561974228885 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 {I|L}D[C(Carbamidomethyl (C))K]NY 3.309 - 112 + 1 2.7 39913.4 1.0 1334 3851 5185 SUDHL4_400M_050219_1,5187 SUDHL4_400M_050219_1,5187,SQKSLWNY False True KVMSVGQNY 26.189682 513.256884753704 1642574.125 5185.0 chr4:67606389-67607194|48|46.31|0.9|5.69|+|ENST00000396225|STAP1,STAP1;;ENSG00000035720|ENST00000265404|STAP1 -0.4978855450948079 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5188 26.193 177.0 535560.0 25 0 62578.0 + -1 LMVLDEIHP 9 113 361.5237079430757 1081.5492944294272 3 361.5230590701103 MULTI CID FTMS 0 0 0 5185 288284.90625 0.8688801590694538 -1 0.0466861724853515 3 Oxidation (M) _LM(Oxidation (M))VLDEIHP_ REV__ENSG00000152332|ENST00000489294|UHMK1;REV__nc|ENSG00000152332|Q8TAS1-2|UHMK1;REV__nc|ENSG00000152332|Q8TAS1-3|UHMK1 11.494710602746466 0.5255349189887087 5 CRAE{I|L}AY 7 -1 28.677 0.0 0.0 2.6515 0.0 0.0 257.16307265449376 0.0 257.16307265449376 0.0 14.072676071743755 0.0 0.0 0 0.2742275032520141 0.0 0.3494850021680094 0.0 CRAE{I|L}AY 2.6515 - 134 1 2.7 78095.8 1.0 1335 3851 5185 SUDHL4_400M_050219_1,5188 SUDHL4_400M_050219_1,5188,LMVLDEIHP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5189 26.197 217.0 358090.0 25 0 37522.0 + 9497 FLDNERHEV 9 99 579.7807854642343 1157.5470179952686 2 579.7804443240166 MULTI CID FTMS 0 0 0 5185 220880.625 0.561518826846399 -4 0.1144065856933593 4 Unmodified _FLDNERHEV_ ENSG00000123143|ENST00000242783|PKN1;ENST00000585839.5_1_19:14544333-14578454:+|nuORF;nc|ENSG00000123143|Q16512-2|PKN1;nc|ENSG00000123143|Q16512-3|PKN1 47.7319792270244 0.0453426645642791 5 PREND{I|L}E 7 7 65.636 0.0 0.0 5.6702 0.0 0.0 286.12861830879064 0.0 286.12861830879064 0.0 26.7077352436602 0.0 0.0 0 1.2302046884880935 0.0 0.3252574989159953 0.3494850021680094 PREND{I|L}E 5.6702 - 780 1 2.7 63747.2 1.0 1336 3851 5185 SUDHL4_400M_050219_1,5189 SUDHL4_400M_050219_1,5189,FLDNERHEV True True FLDNERHEV 26.197228 579.780444324017 1766551.375 5185.0 nc|ENSG00000123143|Q16512-3|PKN1;;ENSG00000123143|ENST00000242783|PKN1;;nc|ENSG00000123143|Q16512-2|PKN1;;ENST00000585839.5_1_19:14544333-14578454:+|nuORF 6.818373998006185 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5190 26.206 505.0 234900.0 25 0 34966.0 -1 0 152 455.2489693017111 454.2416928351111 1 458.2594177126884 MULTI CID FTMS 0 0 0 5185 136924.265625 0.8829091302575021 -3 0.088571548461914 5 5 {[SA]|[TG]}V 3 -1 22.051 0.0 0.0 4.8545 0.0 0.0 0.0 194.07971098380173 194.07971098380173 6.895228641136683 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[SA]|[TG]}V 4.8545 - 87 1 2.7 95149.1 1.0 1337 3851 5185 SUDHL4_400M_050219_1,5190 SUDHL4_400M_050219_1,5190, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5191 26.212 306.0 261590.0 25 0 20283.0 + 43786 YENEVALR 8 116 497.25281760720696 992.491082281214 2 497.2528564333916 MULTI CID FTMS 0 0 0 5185 108096.1953125 1.0 0 0.0 6 Unmodified _YENEVALR_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 19.256988751693697 0.6264283240490721 5 [YE]NEV[{I|L}A]R 8 0 + 30.811 0.0 0.0 3.1045 3.1045 79.558 0.0 0.0 0.0 12.270221229218285 1.6824376479242176 1.6824376479242176 6.720978579357169 0 0.2887254899964357 1.6989700043360187 0.0 0.0 + + [YE]NEV[{I|L}A]R;[YE]NEV{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[YE]GGEV[{I|L}A]R;[YE]GGEV{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 3.1045;2.4273;2.1712;1.4941 +;-;-;- + 173 + 1 2.7 68101.8 1.0 1338 3851 5185 SUDHL4_400M_050219_1,5191 SUDHL4_400M_050219_1,5191,YENEVALR False True False False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 5193 26.22 255.0 226250.0 25 0 19374.0 29333 QIREICSL 8 97 481.2584709635781 960.5023889939562 2 481.2591430544853 MULTI CID FTMS 0 0 0 5192 109517.9921875 0.7682904585955858 1 -0.0355548858642578 1 Unmodified _QIREICSL_ ENSG00000114374|ENST00000338981|USP9Y;ENSG00000124486|ENST00000378308|USP9X;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;nc|ENSG00000114374|O00507-2|USP9Y;nc|ENSG00000124486|Q93008-3|USP9X 26.88365393820708 0.4786498634179528 5 [Q{I|L}]R[TP]{M(Oxidation (M))|F}S{I|L} 8 3 + 26.379 0.0 0.0 2.7464 2.7464 78.036 0.0 0.0 0.0 6.721675119240512 12.884184409058932 6.721675119240512 5.471062485323515 0 1.2544321917401078 0.0 1.0 0.2742275032520141 [Q{I|L}]R[TP]{M(Oxidation (M))|F}S{I|L};[Q{I|L}]R[TP]E{[MS]|[{M(Oxidation (M))|F}A]};[Q{I|L}]RW{I|L}[{M(Oxidation (M))|F}V];[Q{I|L}]K[EP]{M(Oxidation (M))|F}S{I|L};[Q{I|L}]K[EP]{M(Oxidation (M))|F}TV;[Q{I|L}]R[TP]T[{M(Oxidation (M))|F}V];[Q{I|L}]WR{I|L}[{M(Oxidation (M))|F}V];[HV]{M(Oxidation (M))|F}[{I|L}V]{[TV]|[{I|L}S]}{M(Oxidation (M))|F};[Q{I|L}]KEP{[TV]|[{I|L}S]}{M(Oxidation (M))|F};[Q{I|L}]R{[DA]|[EG]}{I|L}[{M(Oxidation (M))|F}V] 2.7464;2.1768;1.8661;1.7923;1.7099;1.55;1.2997;1.0063;0.92669;0.8947 -;-;-;-;-;-;-;-;-;- 118 1 2.68 47719.6 1.0 1339 3852 5192 SUDHL4_400M_050219_1,5193 SUDHL4_400M_050219_1,5193,QIREICSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5194 26.234 800.0 184310.0 25 0 35971.0 + 26301 NQWDGTQHGV 10 136 571.2546735234033 1140.4947941136063 2 571.2545043826103 MULTI CID FTMS 0 0 0 5192 85970.640625 0.7207091926387633 1 -0.0355548858642578 2 Unmodified _NQWDGTQHGV_ ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN;nc|ENSG00000152818|P46939-4|UTRN 53.832793166522166 0.0576554960245129 5 {[QN]|[E{I|L}]|[KN]}W{[{M(Oxidation (M))|F}H]|[RQ]}W[HS] 8 6 + 32.993 0.0 0.0 2.8929 2.8929 72.131 0.0 0.0 0.0 0.2016207118548649 2.009489130229536 0.2016207118548649 0.2016207118548649 0 0.0 0.0 0.9604093769761876 0.8494850021680094 {[QN]|[E{I|L}]|[KN]}W{[{M(Oxidation (M))|F}H]|[RQ]}W[HS];GGQW{[{M(Oxidation (M))|F}H]|[RQ]}W[HS];WW[QP]DW[HS];GGQW{[{M(Oxidation (M))|F}H]|[RQ]}{[DA]|[EG]}[HS];{[QN]|[E{I|L}]|[KN]}WD[QP]QEP;[DP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C(Carbamidomethyl (C))W[HS];{[QN]|[E{I|L}]|[KN]}WDY{I|L}[R{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}W{[{M(Oxidation (M))|F}H]|[RQ]}{[DA]|[EG]}[HS];{[QN]|[E{I|L}]|[KN]}WD{[SA]|[TG]}QH[VG];{[QN]|[E{I|L}]|[KN]}WD[R{M(Oxidation (M))|F}][{M(Oxidation (M))|F}E] 2.8929;2.8752;2.563;2.3743;2.26;2.1909;2.1246;2.0808;2.0305;1.9138 -;-;-;-;-;-;-;-;+;- + 581 1 2.68 114089.7 0.6100000143051147 1340 3852 5192 SUDHL4_400M_050219_1,5194 SUDHL4_400M_050219_1,5194,NQWDGTQHGV True True NQWDGTQHGV 26.233884 571.25450438261 1299079.625 5192.0 nc|ENSG00000152818|P46939-2|UTRN;;nc|ENSG00000152818|P46939-4|UTRN;;ENSG00000152818|ENST00000367545|UTRN 6.167454242706299 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5195 26.235 48.0 1789300.0 25 0 250320.0 + 6813 EEAPSRPAL 9 93 485.2535327406071 968.4925125480142 2 485.2537719607353 MULTI CID FTMS 0 0 0 5192 1095724.75 0.0903220542811991 -6 0.1919612884521484 3 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 29.081581746732265 0.1611639662936252 5 EEAPSR[PA]{I|L} 9 0 + 50.569 0.0 0.0 5.2214 5.2214 90.998 0.0 0.0 0.0 28.4293378834356 8.952424927286842 8.952424927286842 26.84517247177952 0 0.4247425010840047 1.5228787452803376 0.0 0.0 + + EEAPSR[PA]{I|L};[PS]R[VS]{I|L}A[HC];[PS]R[SG]{I|L}{I|L}[HC] 5.2214;2.4495;0.827 +;-;- + 130 + 1 2.68 71534.5 1.0 1341 3852 5192 SUDHL4_400M_050219_1,5195 SUDHL4_400M_050219_1,5195,EEAPSRPAL False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 5196 26.238 116.0 496750.0 25 0 61669.0 + 30062 QVAPVANSY 9 98 474.7432069266106 947.4718609200212 2 474.7429077029228 MULTI CID FTMS 0 0 0 5192 266473.0625 0.3885274932404053 -2 0.0867252349853515 4 Unmodified _QVAPVANSY_ ENSG00000157557|ENST00000360938|ETS2 34.10243960390752 0.1078313939113124 5 A{I|L}{I|L}SY 5 6 25.145 0.0 0.0 2.6539 0.0 0.0 382.1455192225588 0.0 382.1455192225588 0.0 9.025815423834654 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 A{I|L}{I|L}SY 2.6539 - 200 + 1 2.68 49367.9 1.0 1342 3852 5192 SUDHL4_400M_050219_1,5196 SUDHL4_400M_050219_1,5196,QVAPVANSY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5197 26.247 548.0 247030.0 25 0 33923.0 3548 CYCRFFNAF 9 122 585.7443916948449 1169.4742304564895 2 585.7440063357353 MULTI CID FTMS 0 0 0 5192 118473.046875 0.4860100585434354 -2 0.0867252349853515 5 Unmodified _CYCRFFNAF_ ENSG00000159723|ENST00000290953|AGRP 23.1484247019978 0.2366544122328345 5 DEAQQNA{M(Oxidation (M))|F} 8 6 74.347 0.0 0.0 6.3573 0.0 0.0 248.09158522773595 0.0 248.09158522773595 0.0 46.10142131958607 0.0 0.0 0 0.7742275032520141 0.0 0.5994850021680094 0.8494850021680094 DEAQQNA{M(Oxidation (M))|F} 6.3573 - 708 1 2.68 105386.3 1.0 1343 3852 5192 SUDHL4_400M_050219_1,5197 SUDHL4_400M_050219_1,5197,CYCRFFNAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5199 26.255 268.0 226370.0 25 0 18190.0 -1 KMGKTIHKY 9 101 561.3111417169316 0 561.3112670779228 PEAK CID FTMS 0 0 0 5198 183743.265625 0.4126670476724409 -22 0.5375919342041016 1 Oxidation (M) _KM(Oxidation (M))GKTIHKY_ ENSG00000144028|ENST00000323853|SNRNP200 4.3292370932331545 0.3444685223463734 5 P 1 -1 6.9897 0.0 0.0 0.62374 0.0 0.0 462.2557540375756 558.2743013971311 1020.5300554347068 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.62374 - 10 + 1 2.68 54429.2 1.0 1344 3853 5198 SUDHL4_400M_050219_1,5199 SUDHL4_400M_050219_1,5199,KMGKTIHKY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5200 26.268 800.0 95913.0 25 0 23272.0 -1 0 89 630.3248519514609 629.3175754848609 1 630.3261596560478 MULTI CID FTMS 0 0 0 5198 47021.609375 0.2039185874123097 11 -0.3652763366699219 2 5 {M(Oxidation (M))|F}PQ 3 -1 31.229 0.0 0.0 4.9623 0.0 0.0 239.12659187547945 0.0 239.12659187547945 0.0 19.01023442440469 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.25 {M(Oxidation (M))|F}PQ 4.9623 - 71 + 1 2.68 63822.4 0.5299999713897705 1345 3853 5198 SUDHL4_400M_050219_1,5200 SUDHL4_400M_050219_1,5200, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5201 26.278 552.0 224380.0 25 0 27539.0 + 42001 VQPSKFNSY 9 130 535.2693167994994 1068.5240806657987 2 535.2707397341728 MULTI CID FTMS 0 0 0 5198 123449.5078125 0.596297286115006 -2 0.0755939483642578 3 Unmodified _VQPSKFNSY_ ENSG00000126012|ENST00000375401|KDM5C;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C 36.12702656103203 0.0967173616627612 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[RN]YQV 8 7 + 48.369 0.0 0.0 4.5267 4.5267 82.154 0.0 0.0 0.0 5.65675328855982 16.40978057358332 5.65675328855982 5.65675328855982 0 0.8807196863200843 1.0969100130080565 0.0 0.75 {[QV]|[N{I|L}]|[RA]|[KV]}Y[RN]YQV;[VG][R{M(Oxidation (M))|F}]NSYQV;[VG]AY[RN]YQV;[VG][R{M(Oxidation (M))|F}]GGSYQV;{[QV]|[N{I|L}]|[RA]|[KV]}Y[RN]Y[AG]V;[KA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NSYQV;[KA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGSYQV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VVNSYQV;[VG][R{M(Oxidation (M))|F}]NSY[AG]V;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VVGGSYQV 4.5267;3.9973;3.9906;3.9545;3.6599;3.2679;3.2251;3.1772;3.1355;3.1344 -;-;-;-;-;-;-;-;-;- 641 1 2.68 105154.4 1.0 1346 3853 5198 SUDHL4_400M_050219_1,5201 SUDHL4_400M_050219_1,5201,VQPSKFNSY True True VQPSKFNSY 26.278042 535.270739734173 0.0 5198.0 nc|ENSG00000126012|P41229-2|KDM5C;;nc|ENSG00000126012|P41229-3|KDM5C;;nc|ENSG00000126012|P41229-4|KDM5C;;ENSG00000126012|ENST00000375401|KDM5C;;nc|ENSG00000126012|P41229-5|KDM5C 4.449567794799805 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5204 26.287 77.0 701210.0 25 0 109300.0 + 31343 RMSDKVDQ 8 66 489.7354038232026 977.4562547132052 2 489.7357665896416 MULTI CID FTMS 0 0 0 5203 613485.5 0.2615694731190509 -3 0.070352554321289 1 Unmodified _RMSDKVDQ_ REV__ENSG00000141748|ENST00000269586|ARL5C 21.53697664764585 0.591232569029014 5 {[CA]|SS}{I|L}SD[QT]{I|L}Q 9 -1 + 52.101 0.0 0.0 5.3302 5.3302 82.044 0.0 0.0 0.0 27.68832471365308 11.70233012146852 11.70233012146852 3.0102999566398125 0 0.9247425010840048 0.0 0.2742275032520141 0.4247425010840047 {[CA]|SS}{I|L}SD[QT]{I|L}Q;{[CA]|SS}S{I|L}D[QT]{I|L}Q;{[CA]|SS}{I|L}DS[QT]{I|L}Q;{[CA]|SS}D{I|L}S[QT]{I|L}Q;{[CA]|SS}{I|L}SWRDQ;{[CA]|SS}{I|L}D[C(Carbamidomethyl (C))R]{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}RG{M(Oxidation (M))|F}D{I|L}Q;{[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[{M(Oxidation (M))|F}H]|[RQ]}DG{M(Oxidation (M))|F}D{I|L}Q;{[CA]|SS}S{I|L}W[RD]Q 5.3302;5.0223;5.0223;4.8421;4.5585;4.3869;4.3555;4.2068;4.0475;4.002 -;-;-;-;-;-;-;-;-;- 337 + 1 2.661 48323.9 1.0 1347 3855 5203 SUDHL4_400M_050219_1,5204 SUDHL4_400M_050219_1,5204,RMSDKVDQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5205 26.3 800.0 165700.0 25 0 17702.0 + 8041 ENKSCNDKLQ 10 120 618.2867628050144 1234.5589726768287 2 618.2870971560478 MULTI CID FTMS 0 0 0 5203 156228.09375 0.5743018783912973 -2 0.0347976684570312 2 Carbamidomethyl (C) _ENKSC(Carbamidomethyl (C))NDKLQ_ ENSG00000138193|ENST00000371380|PLCE1;nc|ENSG00000138193|Q9P212-2|PLCE1 51.629811660486645 0.0705852162080619 5 SA{I|L}Q 4 7 51.542 0.0 0.0 4.175 0.0 0.0 817.327540647335 0.0 817.327540647335 0.0 26.56295947543775 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.6861818737241735 SA{I|L}Q 4.175 - 1162 + 1 2.661 103473.1 0.8500000238418579 1348 3855 5203 SUDHL4_400M_050219_1,5205 SUDHL4_400M_050219_1,5205,ENKSCNDKLQ True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5206 26.308 437.0 302900.0 25 0 101250.0 + -1 GVDCLARY 8 123 477.2291156169867 952.4436783007734 2 477.2296630740166 MULTI CID FTMS 0 0 0 5203 104022.5078125 0.0226150217589875 -14 0.3556365966796875 3 Carbamidomethyl (C) _GVDC(Carbamidomethyl (C))LARY_ REV__ENSG00000167397|ENST00000394975|VKORC1;REV__nc|ENSG00000167397|Q9BQB6-2|VKORC1;REV__nc|ENSG00000167397|Q9BQB6-3|VKORC1 10.183394434864962 0.7604730176254005 5 [PS]A 3 -1 24.371 0.0 0.0 2.5587 0.0 0.0 0.0 694.2984811174327 694.2984811174327 8.88596409989523 0.0 0.0 0.0 0 0.0 2.0 0.1694451763165201 0.0 [PS]A 2.5587 - 124 1 2.661 105421.7 1.0 1349 3855 5203 SUDHL4_400M_050219_1,5206 SUDHL4_400M_050219_1,5206,GVDCLARY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5207 26.322 800.0 95821.0 25 0 50685.0 + -1 DFPPKEMV 8 24 978.4635989875176 977.4563225209174 1 978.4640380740166 MULTI CID FTMS 0 0 0 5203 92004.0859375 0.3358200957957282 -3 0.070352554321289 4 Oxidation (M) _DFPPKEM(Oxidation (M))V_ REV__ENSG00000146376|ENST00000368149|ARHGAP18;REV__nc|ENSG00000146376|Q8N392-2|ARHGAP18 9.347437153973935 0.7675937258251505 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.661 61623.3 0.6200000047683716 1350 3855 5203 SUDHL4_400M_050219_1,5207 SUDHL4_400M_050219_1,5207,DFPPKEMV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5208 26.336 800.0 206780.0 25 0 52355.0 -1 0 125 571.3208387624824 570.3135622958823 1 572.3268920779228 MULTI CID FTMS 0 0 0 5203 79310.0 0.3234428247720663 22 -0.6170654296875 5 5 [QP]{M(Oxidation (M))|F} 3 -1 13.557 0.0 0.0 2.377 0.0 0.0 0.0 195.14361535668232 195.14361535668232 0.7923088537598151 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [QP]{M(Oxidation (M))|F} 2.377 - 38 1 2.661 127705.4 0.7799999713897705 1351 3855 5203 SUDHL4_400M_050219_1,5208 SUDHL4_400M_050219_1,5208, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5210 26.352 800.0 116760.0 25 0 10704.0 + 29212 QGLCRDKESQ 10 144 582.275708085892 1162.536863238584 2 582.2749511599541 MULTI CID FTMS 0 0 0 5209 80738.234375 0.2049024097306663 6 -0.2411441802978515 1 Unmodified _QGLCRDKESQ_ REV__ENST00000475582.5_1_2:27591237-27591477:-|nuORF 26.268140514670165 0.3785003716575977 5 {[QG]|[NA]}{[QV]|[N{I|L}]|[RA]|[KV]}[DG]DG{M(Oxidation (M))|F}{I|L}Q 11 -1 + 41.258 0.0 0.0 3.5489 3.5489 84.345 0.0 0.0 0.0 2.1009905771207684 29.6638845203234 2.1009905771207684 10.903102994236832 0 1.3494850021680094 1.2218487496163564 0.0 0.1344005005252609 {[QG]|[NA]}{[QV]|[N{I|L}]|[RA]|[KV]}[DG]DG{M(Oxidation (M))|F}{I|L}Q;{[{M(Oxidation (M))|F}H]|[RQ]}Q[DG]DG{M(Oxidation (M))|F}{I|L}Q;{[{M(Oxidation (M))|F}H]|[RQ]}[AG][DG]DG{M(Oxidation (M))|F}{I|L}Q;{[QS]|[NT]}M[EP][{I|L}A]{M(Oxidation (M))|F}{I|L}Q;[VS]C(Carbamidomethyl (C))[EP][{I|L}A]{M(Oxidation (M))|F}{I|L}Q 3.5489;2.6111;1.8227;0.70361;0.34308 -;-;-;-;- 417 1 2.661 73942.9 0.6600000262260437 1352 3856 5209 SUDHL4_400M_050219_1,5210 SUDHL4_400M_050219_1,5210,QGLCRDKESQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5211 26.354 94.0 451820.0 25 0 44096.0 + 35494 STMSTNGIPR 10 78 532.2625793443151 0 532.2635375857353 PEAK CID FTMS 0 0 0 5209 367993.5625 1.0 0 0.0 2 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 28.49450938151212 0.2298535315266205 5 MSTNGA{I|L}D 8 5 40.699 0.0 0.0 3.8305 0.0 0.0 188.07698752625305 82.06694971256093 270.143937238814 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3807196863200844 MSTNGA{I|L}D 3.8305 - 185 + 1 2.661 41239.8 1.0 1353 3856 5209 SUDHL4_400M_050219_1,5211 SUDHL4_400M_050219_1,5211,STMSTNGIPR False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5212 26.36 296.0 247520.0 25 0 20850.0 + 14983 ILQLQQSTR 9 98 362.8812799488589 0 362.8812438845634 PEAK CID FTMS 0 0 0 5209 187562.359375 1.0 0 0.0 3 Unmodified _ILQLQQSTR_ REV__ENSG00000162236|ENST00000294179|STX5;REV__nc|ENSG00000162236|Q13190-2|STX5;REV__nc|ENSG00000162236|Q13190-3|STX5;REV__nc|ENSG00000162236|Q13190-4|STX5 8.155526934196011 0.3334291183486324 5 {I|L} 1 -1 6.9897 0.0 0.0 0.96576 0.0 0.0 525.5744362631491 82.0669420831664 607.6413783463155 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.96576 + + 11 + 1 2.661 68994.2 1.0 1354 3856 5209 SUDHL4_400M_050219_1,5212 SUDHL4_400M_050219_1,5212,ILQLQQSTR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5213 26.366 382.0 190850.0 25 0 11566.0 + 37408 TLAQQPTAV 9 111 464.7585647197808 927.5025765063616 2 464.7588989138603 MULTI CID FTMS 0 0 0 5209 86973.796875 0.585033819845264 -2 0.0579509735107421 4 Unmodified _TLAQQPTAV_ ENSG00000066136|ENST00000447388|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 46.020951573049366 0.0490941689151868 5 [{I|L}T]AQQ 5 4 43.15 0.0 0.0 4.6523 0.0 0.0 0.0 383.1936525163804 383.1936525163804 25.79832260590335 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8567820994498799 0.2887254899964357 + [{I|L}T]AQQ 4.6523 + + 389 1 2.661 61140.4 1.0 1355 3856 5209 SUDHL4_400M_050219_1,5213 SUDHL4_400M_050219_1,5213,TLAQQPTAV True True TLAQQPTAV 26.366454 464.75889891386 814223.1875 5209.0 ENSG00000066136|ENST00000447388|NFYC;;nc|ENSG00000066136|Q13952|NFYC;;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC;;nc|ENSG00000066136|Q13952-5|NFYC;;ENST00000424419.6_1_1:41157373-41232429:+|nuORF 5.886615912119548 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5215 26.371 15.0 3286900.0 25 0 224200.0 + 26456 NTIDPSHPM 9 78 506.23177559675577 1010.4489982603116 2 506.2319213747978 MULTI CID FTMS 0 0 0 5214 4348628.5 0.4636924653400524 5 -0.2106761932373047 1 Unmodified _NTIDPSHPM_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 32.30548876998284 0.1201446275138228 5 {[QS]|[NT]}{I|L}DPSH{NN|[MP]|[D{I|L}]|[EV]} 9 0 + 57.074 0.0 0.0 5.6484 5.6484 87.557 0.0 0.0 0.0 27.147642715192504 8.913187455970544 8.913187455970544 8.913187455970544 0 0.4247425010840047 2.0 0.3494850021680094 0.0 + + {[QS]|[NT]}{I|L}DPSH{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}{I|L}[{M(Oxidation (M))|F}V]D[R{M(Oxidation (M))|F}];{[QS]|[NT]}[{M(Oxidation (M))|F}V]{I|L}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}[YT][DG]{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}[{M(Oxidation (M))|F}V][R{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]} 5.6484;4.7663;4.4683;2.8334;2.1923 +;-;-;-;- + 205 + 1 2.642 42884.9 1.0 1356 3857 5214 SUDHL4_400M_050219_1,5215 SUDHL4_400M_050219_1,5215,NTIDPSHPM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5216 26.374 131.0 462960.0 25 0 55026.0 + -1 PQMLLKLRK 9 90 381.5740135422 1141.7002112268 3 381.5740234255791 MULTI CID FTMS 0 0 0 5214 263792.28125 0.0178249590007189 23 -0.6034755706787109 2 Oxidation (M) _PQM(Oxidation (M))LLKLRK_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 2.498486711656943 0.8274632594916526 5 K{I|L}K[QP]E 6 -1 23.645 0.0 0.0 2.071 0.0 0.0 400.2807179181656 0.0 400.2807179181656 0.0 6.655462488490684 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.071 - 29 1 2.642 53470.6 1.0 1357 3857 5214 SUDHL4_400M_050219_1,5216 SUDHL4_400M_050219_1,5216,PQMLLKLRK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5217 26.379 270.0 367920.0 25 0 77073.0 5932 DQARLGMCRQ 10 92 589.2831395066323 1176.5517260800646 2 589.2834350466728 MULTI CID FTMS 0 0 0 5214 251829.53125 1.0 0 0.0 3 Unmodified _DQARLGMCRQ_ ENSG00000174371|ENST00000366548|EXO1;nc|ENSG00000174371|Q9UQ84-4|EXO1 24.99096001346401 0.4071966087057876 5 G{M(Oxidation (M))|F}{I|L}Q 4 7 37.735 0.0 0.0 3.2073 0.0 0.0 713.31157118965 0.0 713.31157118965 0.0 20.79812217439503 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}Q 3.2073 - 115 1 2.642 78398.4 1.0 1358 3857 5214 SUDHL4_400M_050219_1,5217 SUDHL4_400M_050219_1,5217,DQARLGMCRQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5218 26.384 288.0 218490.0 25 0 24485.0 + -1 LISPTMHHA 9 83 511.759506499513 0 511.7596313357353 PEAK CID FTMS 0 0 0 5214 138533.34375 0.7779625306055977 -1 0.0304679870605468 4 Oxidation (M) _LISPTM(Oxidation (M))HHA_ REV__ENST00000304523.9_1_4:16900005-16900254:-|nuORF 26.88365393820708 0.1386685954232994 5 {I|L}SAAV 5 -1 32.563 0.0 0.0 3.1877 0.0 0.0 113.08534493086354 464.1405428522094 577.225887783073 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L}SAAV 3.1877 - 85 + 1 2.642 51725.2 1.0 1359 3857 5214 SUDHL4_400M_050219_1,5218 SUDHL4_400M_050219_1,5218,LISPTMHHA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5219 26.392 445.0 219220.0 25 0 16572.0 + 38300 TQFVSGSKY 9 121 508.7556475220106 1015.4967421108212 2 508.7552673220634 MULTI CID FTMS 0 0 0 5214 120641.2890625 0.5141817758759173 -1 0.0304679870605468 5 Unmodified _TQFVSGSKY_ ENSG00000171681|ENST00000261168|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 45.739877483867886 0.0497104363764649 5 [QT]{M(Oxidation (M))|F}VSGSKY 9 0 + 68.783 0.0 0.0 6.7734 6.7734 93.251 0.0 0.0 0.0 16.355830254716253 10.280287236002437 10.280287236002437 10.280287236002437 0 1.0 0.9208187539523752 0.2742275032520141 0.0 + + [QT]{M(Oxidation (M))|F}VSGSKY;[QT]{M(Oxidation (M))|F}VSGSYK;[DP][{I|L}A]GSV{M(Oxidation (M))|F}[NP];[DP][Q{I|L}]SV{M(Oxidation (M))|F}[NP];[NP]{[QN]|[E{I|L}]|[KN]}SV{M(Oxidation (M))|F}[NP];[QT]{M(Oxidation (M))|F}[PA]{[QN]|[E{I|L}]|[KN]}[NP];[KS]G[HM]V{M(Oxidation (M))|F}[NP];[AG]T{M(Oxidation (M))|F}[PA]{[QN]|[E{I|L}]|[KN]}[NP];AAS{M(Oxidation (M))|F}[PA]{[QN]|[E{I|L}]|[KN]}[NP];[QT]M[{I|L}A]{[QN]|[E{I|L}]|[KN]}[NP] 6.7734;5.761;3.7501;3.4033;3.1848;2.4165;2.3438;1.903;0.76122;0.59845 +;-;-;-;-;-;-;-;-;- + 437 + 1 2.642 77344.4 1.0 1360 3857 5214 SUDHL4_400M_050219_1,5219 SUDHL4_400M_050219_1,5219,TQFVSGSKY True True TQFVSGSKY 26.391895 508.755267322063 925707.0 5214.0 nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;;ENSG00000171681|ENST00000261168|ATF7IP 8.21200942993164 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5220 26.4 467.0 214710.0 25 0 15979.0 + 18593 LADPENRQL 9 106 528.2783501626463 1054.5421473920926 2 528.2788574099541 MULTI CID FTMS 0 0 0 5214 102666.8359375 0.9266835483384176 2 -0.1351165771484375 6 Unmodified _LADPENRQL_ ENSG00000172164|ENST00000517992|SNTB1;ENST00000519177.5_1_8:121583594-121823792:-|nuORF;nc|ENSG00000172164|Q13884-2|SNTB1 11.517880264261096 0.5249077435482886 5 {I|L}ADPM 5 5 69.949 0.0 0.0 6.6331 0.0 0.0 0.0 524.2694005757517 524.2694005757517 59.11104478033212 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.0 0.0 {I|L}ADPM 6.6331 - 211 + 1 2.642 83135.8 1.0 1361 3857 5214 SUDHL4_400M_050219_1,5220 SUDHL4_400M_050219_1,5220,LADPENRQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5221 26.414 800.0 77625.0 25 0 16377.0 -1 0 41 1172.4720826176294 3514.3944184530883 3 1173.139941394329 MULTI CID FTMS 0 0 0 5214 206619.53125 0.49509919693264 4 -0.2048988342285156 7 5 GH 2 -1 9.464 0.0 0.0 0.26929 0.0 0.0 2147.7644038457265 1169.5568331354127 3317.321236981139 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GH 0.26929 - 7 + 1 2.642 56004.0 0.5899999737739563 1362 3857 5214 SUDHL4_400M_050219_1,5221 SUDHL4_400M_050219_1,5221, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5222 26.428 800.0 263980.0 25 0 20141.0 -1 0 77 877.004736845673 4379.987301895365 5 877.6055786013603 MULTI CID FTMS 0 0 0 5214 136969.5625 0.9498730909462874 -1 0.0304679870605468 8 5 AASA 4 -1 21.938 0.0 0.0 0.50087 0.0 0.0 584.1296987320574 3492.6798135801414 4076.809512312199 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AASA 0.50087 - 95 + 1 2.642 146858.6 0.5799999833106995 1363 3857 5214 SUDHL4_400M_050219_1,5222 SUDHL4_400M_050219_1,5222, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5224 26.432 84.0 547040.0 25 0 22610.0 + 26609 NVPWTRTI 8 98 493.772686058966 985.530819184732 2 493.7722961306572 MULTI CID FTMS 0 0 0 5223 694122.1875 0.0281790748132348 9 -0.2580699920654297 1 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 21.74664581756881 0.5868176546531598 5 {[NV]|[RG]}RNVGNT{I|L} 9 -1 + 38.07 0.0 0.0 3.8629 3.8629 84.345 0.0 0.0 0.0 2.632192780232792 23.465781442533363 2.632192780232792 9.208187539523756 0 1.1237125054200234 0.0 0.0 0.0 {[NV]|[RG]}RNVGNT{I|L};{[NV]|[RG]}RGGVGNT{I|L};{[NV]|[RG]}RNVGGGT{I|L};{[NV]|[RG]}RGGVGGGT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HQ]{M(Oxidation (M))|F}NT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}HNT{I|L} 3.8629;2.9285;2.9285;1.9986;1.7811;1.6775 -;-;-;-;-;- 174 1 2.642 40375.7 1.0 1364 3858 5223 SUDHL4_400M_050219_1,5224 SUDHL4_400M_050219_1,5224,NVPWTRTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5225 26.436 169.0 300400.0 25 0 33726.0 -1 NTIDPSHPM 9 97 514.2287488988064 1026.4429448644128 2 514.2289306521416 MULTI CID FTMS 0 0 0 5223 130283.7890625 0.4576713566546138 5 -0.1808910369873047 2 Oxidation (M) _NTIDPSHPM(Oxidation (M))_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 20.453626601364224 0.2830276176381075 5 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}] 8 -1 + 51.872 0.0 0.0 5.0536 5.0536 90.109 0.0 0.0 0.0 27.575830118461973 4.6040937697618745 4.6040937697618745 22.973513020991515 0 0.4247425010840047 2.0 0.0 0.0 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}{[QG]|[NA]}[HN]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QS]|[NT]}{[{M(Oxidation (M))|F}D]|MM}{I|L}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}[YE][TP][R{M(Oxidation (M))|F}] 5.0536;2.8154;2.5904;1.5218 -;-;-;- 93 + 1 2.642 44441.7 1.0 1365 3858 5223 SUDHL4_400M_050219_1,5225 SUDHL4_400M_050219_1,5225,NTIDPSHPM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5226 26.439 179.0 357740.0 25 0 29030.0 + 1752 ALRDNSTMGY 10 85 564.2608753730003 1126.5071978128003 2 564.2603637576103 MULTI CID FTMS 0 0 0 5223 396219.8125 0.5026033507328738 -1 0.0612678527832031 3 Unmodified _ALRDNSTMGY_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P 45.739877483867886 0.1051543674217965 5 DNSTMGY 7 3 58.805 0.0 0.0 5.2201 0.0 0.0 340.2225514142594 0.0 340.2225514142594 0.0 49.85222622033724 0.0 0.0 0 1.3494850021680094 0.0 0.7302046884880937 0.3807196863200844 + DNSTMGY 5.2201 + + 140 1 2.642 51009.3 1.0 1366 3858 5223 SUDHL4_400M_050219_1,5226 SUDHL4_400M_050219_1,5226,ALRDNSTMGY True True ALRDNSTMGY 26.439064 564.26036375761 3228220.25 5223.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1;;nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF 6.7058132489522295 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5227 26.442 152.0 286390.0 25 0 30270.0 + 31195 RLQEDPPAGV 10 73 541.285142280499 0 541.2851440310478 PEAK CID FTMS 0 0 0 5223 245749.671875 1.0 0 0.0 4 Unmodified _RLQEDPPAGV_ ENSG00000077721|ENST00000371558|UBE2A;nc|ENSG00000077721|P49459-2|UBE2A 36.506200033944 0.1478449698601293 5 G[PA]PT 5 8 34.961 0.0 0.0 3.2354 0.0 0.0 117.07948758658549 537.2320650690061 654.3115526555916 0.0 0.0 0.0 0.0 0 2.1989700043360187 0.0 0.4247425010840047 0.0 G[PA]PT 3.2354 - 65 + 1 2.642 41273.9 1.0 1367 3858 5223 SUDHL4_400M_050219_1,5227 SUDHL4_400M_050219_1,5227,RLQEDPPAGV False True RLQEDPPAGV 26.442089 541.285144031048 2168691.75 5223.0 nc|ENSG00000077721|P49459-2|UBE2A;;ENSG00000077721|ENST00000371558|UBE2A 9.809830029805502 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5228 26.447 238.0 365770.0 25 0 86207.0 + 32414 RYYTPTISR 9 109 578.8091268288421 1155.603700724484 2 578.8081542849541 MULTI CID FTMS 0 0 0 5223 238797.34375 0.8584010126225086 -1 0.0612678527832031 5 Unmodified _RYYTPTISR_ ENSG00000126067|ENST00000373237|PSMB2 20.580933911654288 0.2795815587326093 5 {I|L}SR 3 6 26.682 0.0 0.0 2.309 0.0 0.0 781.37700087715 0.0 781.37700087715 0.0 5.47473008205932 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + {I|L}SR 2.309 + + 23 1 2.642 71605.2 1.0 1368 3858 5223 SUDHL4_400M_050219_1,5228 SUDHL4_400M_050219_1,5228,RYYTPTISR False True RYYTPTISR 26.446547 578.808154284954 1599228.875 5223.0 ENSG00000126067|ENST00000373237|PSMB2 5.589068412780762 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5229 26.451 244.0 361400.0 25 0 45564.0 -1 LSCNSNGY 8 123 457.6871687637519 913.3597845943038 2 457.6872436404228 MULTI CID FTMS 0 0 0 5223 120621.9453125 0.3823927125991385 -1 0.0612678527832031 6 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))NSNGY_ ENSG00000058335|ENST00000558480|RASGRF1;ENST00000560334.5_1_15:79271198-79356973:-|nuORF;nc|ENSG00000058335|Q13972|RASGRF1 5.230669730166228 0.792582437072536 5 Y 1 -1 12.218 0.0 0.0 1.3378 0.0 0.0 732.2852739515289 0.0 732.2852739515289 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3378 + + 62 + 1 2.642 77444.0 1.0 1369 3858 5223 SUDHL4_400M_050219_1,5229 SUDHL4_400M_050219_1,5229,LSCNSNGY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5230 26.465 800.0 98846.0 25 0 9791.7 + 41040 VMINKATPY 9 134 526.7737627230703 1051.5329725129404 2 526.7753784060478 MULTI CID FTMS 0 0 0 5223 108646.5078125 0.5052207189294639 -10 0.3446521759033203 7 Oxidation (M) _VM(Oxidation (M))INKATPY_ ENSG00000170906|ENST00000485876|NDUFA3 49.93300154707207 0.0405168250806675 5 {M(Oxidation (M))|F}TPY 4 5 35.539 0.0 0.0 3.3797 0.0 0.0 525.297939409228 0.0 525.297939409228 0.0 18.54909263460896 0.0 0.0 0 1.1382104921644451 0.0 0.0 0.0 {M(Oxidation (M))|F}TPY 3.3797 - 527 + 1 2.642 67477.4 0.5299999713897705 1370 3858 5223 SUDHL4_400M_050219_1,5230 SUDHL4_400M_050219_1,5230,VMINKATPY True False VMINKATPY 26.464933 526.775378406048 933992.0625 5223.0 ENSG00000170906|ENST00000485876|NDUFA3 4.7605031331380205 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5231 26.468 170.0 266750.0 25 0 21658.0 + 10482 FTQAARTSL 9 73 497.76942074028034 0 497.7695190310478 PEAK CID FTMS 0 0 0 5223 192082.90625 1.0 0 0.0 8 Unmodified _FTQAARTSL_ ENSG00000128886|ENST00000319359|ELL3;ENST00000497700.1_1_15:44068610-44069126:-|nuORF 21.53697664764585 0.1871382778112851 5 TQA 3 6 17.435 0.0 0.0 1.7549 0.0 0.0 147.0711157952107 543.2904146783811 690.3615304735918 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + TQA 1.7549 + + 31 + 1 2.642 43511.9 1.0 1371 3858 5223 SUDHL4_400M_050219_1,5231 SUDHL4_400M_050219_1,5231,FTQAARTSL False True FTQAARTSL 26.468253 497.769519031048 869565.8125 5223.0 ENSG00000128886|ENST00000319359|ELL3;;ENST00000497700.1_1_15:44068610-44069126:-|nuORF 3.1322842041651406 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5232 26.482 800.0 104500.0 25 0 24147.0 -1 0 50 1168.479049674747 3502.415319624441 3 1168.812060534954 MULTI CID FTMS 0 0 0 5223 158799.265625 0.7859189235879926 -2 0.09173583984375 9 5 G 1 -1 6.9897 0.0 0.0 0.19957 0.0 0.0 2147.7546357356623 1294.6178893439387 3442.372525079601 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19957 - 5 + 1 2.642 73371.6 0.5199999809265137 1372 3858 5223 SUDHL4_400M_050219_1,5232 SUDHL4_400M_050219_1,5232, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5233 26.496 800.0 119860.0 25 0 8223.3 + 31590 RQQPPSTTTF 10 134 581.7965153927422 1161.5784778522843 2 581.7965576052666 MULTI CID FTMS 0 0 0 5223 106094.5859375 0.90487427543996 -1 0.0612678527832031 10 Unmodified _RQQPPSTTTF_ ENSG00000139697|ENST00000602398|SBNO1 61.60191391372663 0.0323840705564037 5 {[QG]|[NA]}VQP[PS]TTT{M(Oxidation (M))|F} 11 2 + 59.232 0.0 0.0 5.0993 5.0993 79.25 0.0 0.0 0.0 1.3784540602303608 10.267985044314578 1.3784540602303608 1.3784540602303608 0 1.8182503180159344 0.8538719643217619 1.774227503252014 0.1079495689832512 {[QG]|[NA]}VQP[PS]TTT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}QP[PS]TTT{M(Oxidation (M))|F};{[QG]|[NA]}VQPADVTT{M(Oxidation (M))|F};[AG]RQP[PS]TTT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}QPADVTT{M(Oxidation (M))|F};[AG]RQPADVTT{M(Oxidation (M))|F};{[QG]|[NA]}VQPA[VS]ET{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}[AG]P[PS]TTT{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}QPA[VS]ET{M(Oxidation (M))|F};[AG]GVQP[PS]TTT{M(Oxidation (M))|F} 5.0993;4.9806;4.8806;4.8256;4.762;4.607;4.3046;4.1916;4.186;4.1194 -;+;-;-;-;-;-;-;-;- + 1525 1 2.642 78204.1 0.5400000214576721 1373 3858 5223 SUDHL4_400M_050219_1,5233 SUDHL4_400M_050219_1,5233,RQQPPSTTTF True True RQQPPSTTTF 26.495951 581.796557605267 1880907.625 5223.0 ENSG00000139697|ENST00000602398|SBNO1 8.422481218973795 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5234 26.502 251.0 209140.0 25 0 29119.0 38415 TRHLLCTRPS 10 102 395.2168485452484 0 395.2166015505791 PEAK CID FTMS 0 0 0 5223 93347.921875 1.0 0 0.0 11 Unmodified _TRHLLCTRPS_ ENST00000503794.5_1_5:141382760-141382808:-|nuORF 5.731851221503515 0.3961065659209837 5 E 1 10 6.8667 0.0 0.0 0.87094 0.0 0.0 394.242284457901 262.1084078424438 656.3506923003448 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 E 0.87094 - 5 + 1 2.642 44903.0 1.0 1374 3858 5223 SUDHL4_400M_050219_1,5234 SUDHL4_400M_050219_1,5234,TRHLLCTRPS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5236 26.506 8.9 4711700.0 25 0 663420.0 + 6814 EEAPSRPAL 9 57 485.2535327406071 968.4925125480142 2 485.2534362673759 MULTI CID FTMS 0 0 0 5235 5642558.0 0.4651235905375092 1 -0.00714111328125 1 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 29.081581746732265 0.1611639662936252 5 EEAPSR[PA]{I|L} 9 0 + 41.026 0.0 0.0 4.2361 4.2361 88.349 0.0 0.0 0.0 28.80773735390442 1.5398434942550026 1.5398434942550026 41.02622485006798 0 0.4247425010840047 1.5228787452803376 0.0 0.0 + + EEAPSR[PA]{I|L} 4.2361 + + 44 + 1 2.626 37891.3 1.0 1375 3859 5235 SUDHL4_400M_050219_1,5236 SUDHL4_400M_050219_1,5236,EEAPSRPAL False True EEAPSRPAL 26.506122 485.253436267376 118714424.0 5235.0 nc|ENSG00000173349|Q587I9|SFT2D3 6.842874844868978 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 5237 26.509 141.0 329210.0 25 0 63836.0 + + -1 RSPMPGAAY 9 85 474.7432069266106 947.4718609200212 2 474.7425414919853 MULTI CID FTMS 0 0 0 5235 99673.4140625 0.145327491436085 5 -0.110940933227539 2 Carbamidomethyl (C) _NLSC(Carbamidomethyl (C))QLLT_ nc|ENSG00000066117|Q96GM5-2|SMARCD1;ENSG00000066117|ENST00000394963|SMARCD1;ENST00000547247.5_1_12:50479152-50482438:+|nuORF 8.593279151180031 0.7721714526254883 5 AY 2 -1 19.464 0.0 0.0 2.0543 0.0 0.0 695.360408748926 0.0 695.360408748926 0.0 9.282889288488434 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 2.0543 - 82 + 1 2.626 41159.9 1.0 1376 3859 5235 SUDHL4_400M_050219_1,5237 SUDHL4_400M_050219_1,5237,NLSCQLLT False False RSPMPGAAY 26.508949 474.742541491985 455059.375 5235.0 nc|ENSG00000066117|Q96GM5-2|SMARCD1;;ENSG00000066117|ENST00000394963|SMARCD1;;ENST00000547247.5_1_12:50479152-50482438:+|nuORF 1.4642108927170436 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5239 26.513 56.0 765370.0 25 0 101810.0 + 38982 SLDQPTQTV 9 68 494.75113786294327 987.4877227926866 2 494.7504760622978 MULTI CID FTMS 0 0 0 5238 986831.0 0.0258731494121673 -8 0.2970314025878906 1 Unmodified _TVQDLQGEV_ ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENSG00000184110|ENST00000331666|EIF3C 24.020572477871973 0.2255576514309169 5 {[TV]|[{I|L}S]}QD 4 5 33.5 0.0 0.0 3.3924 0.0 0.0 0.0 541.2629968007521 541.2629968007521 12.525749891599531 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3054621874040891 + {[TV]|[{I|L}S]}QD 3.3924 + + 146 1 2.626 36619.4 1.0 1377 3860 5238 SUDHL4_400M_050219_1,5239 SUDHL4_400M_050219_1,5239,TVQDLQGEV False False SLDQPTQTV 26.513263 494.750476062298 774469824.0 5238.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 6.098163763682048 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5240 26.515 72.0 666830.0 25 0 53512.0 + 13196 HGIDPTGTY 9 92 480.7249464247716 959.4353399163432 2 480.7244140505791 MULTI CID FTMS 0 0 0 5238 778799.0625 0.1918985741632948 -7 0.2614765167236328 2 Unmodified _HGIDPTGTY_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF 67.34385681178166 0.0221257235307089 5 {[HG]|PP}{I|L}DPTGTY 9 0 + 63.369 0.0 0.0 6.6048 6.6048 89.005 0.0 0.0 0.0 4.762036441594191 50.60452463081031 4.762036441594191 6.7609125905568135 0 0.9247425010840048 0.0 1.2059771852360797 0.0 + + {[HG]|PP}{I|L}DPTGTY;{[HG]|PP}{I|L}DPGTTY;{[VA]|[{I|L}G]}HDPTGTY;{[SA]|[TG]}Y[W{I|L}]GTY;{[VA]|[{I|L}G]}HDPGTTY;[YT]G[W{I|L}]GTY;{[VA]|[{I|L}G]}[WY]TGTY;{[VA]|[{I|L}G]}[WY]GTTY;{[WT]|[RM]}[MT]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y;{[VA]|[{I|L}G]}[WY]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y 6.6048;5.9001;5.7937;5.1758;5.0891;4.6308;3.6362;2.9316;0.96151;0.28068 +;-;-;-;-;-;-;-;-;- + 227 1 2.626 42208.9 1.0 1378 3860 5238 SUDHL4_400M_050219_1,5240 SUDHL4_400M_050219_1,5240,HGIDPTGTY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5241 26.528 783.0 353490.0 25 0 51019.0 + -1 RMIDIQTRM 9 146 590.3024792817981 1178.5904056303962 2 590.3027221560478 MULTI CID FTMS 0 0 0 5238 270408.71875 1.0 0 0.0 3 Oxidation (M) _RMIDIQTRM(Oxidation (M))_ nc|ENSG00000071462|O43709-2|BUD23;ENSG00000071462|ENST00000265758|BUD23;nc|ENSG00000071462|O43709-3|BUD23;ENST00000463307.5_1_7:73097949-73107126:+|nuORF 24.99096001346401 0.2132109383330889 5 {[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}QAW{M(Oxidation (M))|F} 9 -1 + 49.053 0.0 0.0 4.162 4.162 84.433 0.0 0.0 0.0 14.547057244614471 5.752574989159953 5.752574989159953 9.208187539523747 0 1.1643943297944483 1.3979400086720375 0.2887254899964357 0.6139829889124311 {[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}QAW{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}[AG]AW{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}QA{[DA]|[EG]}{M(Oxidation (M))|F};[Q{I|L}]HH{I|L}QAW{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}RRW{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}[KA]W{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}QAM{[DS]|[MA]|[CV]|TT};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}Q[{M(Oxidation (M))|F}T]R;[KS]{[WN]|[YH]}{I|L}QAW{M(Oxidation (M))|F};{[WT]|[RM]}{NN|[MP]|[D{I|L}]|[EV]}{I|L}QAW{M(Oxidation (M))|F} 4.162;3.3807;3.3807;2.9277;2.8699;2.8265;2.677;2.4842;2.2779;2.2391 -;-;-;-;-;-;-;-;-;- 1183 1 2.626 210526.1 1.0 1379 3860 5238 SUDHL4_400M_050219_1,5241 SUDHL4_400M_050219_1,5241,RMIDIQTRM False False RMIDIQTRM 26.528482 590.302722156048 1347396.25 5238.0 nc|ENSG00000071462|O43709-2|BUD23;;ENSG00000071462|ENST00000265758|BUD23;;nc|ENSG00000071462|O43709-3|BUD23;;ENST00000463307.5_1_7:73097949-73107126:+|nuORF -0.0270083347956339 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5242 26.533 270.0 473000.0 25 0 63840.0 -1 VAVDMMCS 8 124 464.6821604978061 927.3497680624122 2 464.6819030642509 MULTI CID FTMS 0 0 0 5238 249476.28125 0.288617838856687 -3 0.1422576904296875 4 Carbamidomethyl (C),Oxidation (M) _VAVDM(Oxidation (M))MC(Carbamidomethyl (C))S_ ENSG00000108557|ENST00000353383|RAI1 34.18733598223924 0.3315367612694167 5 VAD 3 -1 54.182 0.0 0.0 5.8427 0.0 0.0 0.0 639.1964522389917 639.1964522389917 25.052725051033065 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.75 0.0 VAD 5.8427 - 211 + 1 2.626 102138.1 1.0 1380 3860 5238 SUDHL4_400M_050219_1,5242 SUDHL4_400M_050219_1,5242,VAVDMMCS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5243 26.547 800.0 122120.0 25 0 8838.2 + 16178 IVDPQNQTM 9 152 523.2521932856873 1044.4898336381746 2 523.7523681521416 MULTI CID FTMS 0 0 0 5238 112528.46875 0.9217410124030472 -6 0.2306766510009765 5 Unmodified _IVDPQNQTM_ ENSG00000169230|ENST00000303204|PRELID1;ENST00000511309.5_1_5:176730986-176733129:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1 15.847184025352805 0.4077185912009129 5 [{I|L}V][Y{M(Oxidation (M))|F}]{I|L}A{I|L}V 8 7 37.867 0.0 0.0 3.6254 0.0 0.0 0.0 122.9403090622558 122.9403090622558 12.487737688117235 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 [{I|L}V][Y{M(Oxidation (M))|F}]{I|L}A{I|L}V 3.6254 - 1041 1 2.626 79511.6 0.6299999952316284 1381 3860 5238 SUDHL4_400M_050219_1,5243 SUDHL4_400M_050219_1,5243,IVDPQNQTM False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5244 26.554 366.0 314940.0 25 0 39781.0 + 34294 SLREDQQSF 9 119 555.2649689038376 1108.515384874475 2 555.2635375857353 MULTI CID FTMS 0 0 0 5238 97543.640625 0.4718204347421906 -2 0.0809898376464843 6 Unmodified _SLREDQQSF_ chr7:74220734-74223724|44|16.84|0.83|4.35|+|ENST00000488266|LAT2,LAT2;ENSG00000086730|ENST00000460943|LAT2;nc|ENSG00000086730|Q9GZY6-2|LAT2 37.07464296494664 0.0915153923251136 5 {[TV]|[{I|L}S]}REDQQS{M(Oxidation (M))|F} 9 0 + 54.862 0.0 0.0 4.9492 4.9492 86.29 0.0 0.0 0.0 10.684052334584171 14.97302484056646 10.684052334584171 9.208187539523742 0 1.274227503252014 1.2218487496163564 0.5 0.0 + + {[TV]|[{I|L}S]}REDQQS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}RED[AG]QS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}REDQ[AG]S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HT]KQQS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QT[HK]QS{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][VP]KQQS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}RED[AG][AG]S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HT]K[AG]QS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HT]KQ[AG]S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]T[HK]QS{M(Oxidation (M))|F} 4.9492;4.1185;4.1185;3.9853;3.6868;3.3278;3.2917;3.1547;3.1547;2.8561 +;-;-;-;-;-;-;-;-;- + 456 1 2.626 88809.3 1.0 1382 3860 5238 SUDHL4_400M_050219_1,5244 SUDHL4_400M_050219_1,5244,SLREDQQSF True True SLREDQQSF 26.553897 555.2656 850262.5625 5238.0 nc|ENSG00000086730|Q9GZY6-2|LAT2;;chr7:74220734-74223724|44|16.84|0.83|4.35|+|ENST00000488266|LAT2,LAT2;;ENSG00000086730|ENST00000460943|LAT2 6.446033000946045 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5245 26.568 800.0 123850.0 25 0 5653.5 + 44464 YNDNVCELNAF 11 143 651.279549234228 1300.544545535256 2 651.2785522341728 MULTI CID FTMS 0 0 0 5238 233619.90625 1.0 0 0.0 7 Unmodified _YNDNVCELNAF_ REV__ENSG00000183765|ENST00000404276|CHEK2;REV__nc|ENSG00000183765|O96017-10|CHEK2;REV__nc|ENSG00000183765|O96017-12|CHEK2;REV__nc|ENSG00000183765|O96017-2|CHEK2;REV__nc|ENSG00000183765|O96017-5|CHEK2;REV__nc|ENSG00000183765|O96017-6|CHEK2;REV__nc|ENSG00000183765|O96017-7|CHEK2;REV__nc|ENSG00000183765|O96017-8|CHEK2 15.248480904072842 0.7179608125786238 5 {[QG]|[NA]}GHDEAQAGNA{M(Oxidation (M))|F} 13 -1 + 112.62 0.0 0.0 8.6594 8.6594 88.349 0.0 0.0 0.0 2.632414347745808 16.642078980768062 2.632414347745808 2.632414347745808 0 0.8494850021680094 1.2218487496163564 0.2302046884880938 1.7658715643802767 {[QG]|[NA]}GHDEAQAGNA{M(Oxidation (M))|F};[AG]NHDEAQAGNA{M(Oxidation (M))|F};[AG]GGHDEAQAGNA{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQAGAN{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQQNA{M(Oxidation (M))|F};[AG]NHDEAQAGAN{M(Oxidation (M))|F};{[QG]|[NA]}GHDEA[AG]AGNA{M(Oxidation (M))|F};{[QG]|[NA]}GHDEAQAGGGA{M(Oxidation (M))|F};[AG]NHDEAQQNA{M(Oxidation (M))|F};[AG]GGHDEAQAGAN{M(Oxidation (M))|F} 8.6594;8.457;8.2925;8.2583;8.1487;8.0559;7.9618;7.9618;7.9463;7.8914 -;-;-;-;-;-;-;-;-;- 30382 1 2.626 76222.7 0.949999988079071 1383 3860 5238 SUDHL4_400M_050219_1,5245 SUDHL4_400M_050219_1,5245,YNDNVCELNAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5246 26.572 198.0 501330.0 25 0 40523.0 + 39315 VAEENTRVL 9 114 515.7799167764455 1029.5452806196909 2 515.7808715701103 MULTI CID FTMS 0 0 0 5238 188057.28125 0.3682962545165433 -3 0.1422576904296875 8 Unmodified _VAEESRQVL_ ENSG00000156256|ENST00000399976|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF 56.17704186161178 0.0281986971544335 5 VAEENTRV{I|L} 9 3 + 86.208 0.0 0.0 8.3734 8.3734 94.562 0.0 0.0 0.0 74.94854431422095 6.901552601841601 6.901552601841601 9.208187539523747 0 0.805462187404089 2.0 0.8494850021680094 0.3494850021680094 VAEENTRV{I|L};VAEEGGTRV{I|L};VA{M(Oxidation (M))|F}[{I|L}T]P[NG]V{I|L};VA{M(Oxidation (M))|F}[{I|L}T]P[KT][PG];{[VA]|[{I|L}G]}E[TP][KS][W{I|L}];{[VA]|[{I|L}G]}EVV{[QS]|[NT]}[W{I|L}];[W{I|L}]{[QS]|[NT]}{[TV]|[{I|L}S]}SP{I|L};[W{I|L}]{[QS]|[NT]}{[WT]|[RM]}P{I|L};{[CP]|[EA]}V[TP][KS][W{I|L}];{[CP]|[EA]}VVV{[QS]|[NT]}[W{I|L}] 8.3734;7.479;4.1666;3.7801;2.5838;2.0554;1.9964;1.7066;1.0499;0.52149 -;-;-;-;-;-;-;-;-;- 244 + 1 2.626 80016.7 1.0 1384 3860 5238 SUDHL4_400M_050219_1,5246 SUDHL4_400M_050219_1,5246,VAEESRQVL True True VAEENTRVL 26.571538 515.78087157011 3309726.0 5238.0 ENSG00000156256|ENST00000399976|USP16;;nc|ENSG00000156256|Q9Y5T5-4|USP16;;nc|ENSG00000156256|Q9Y5T5-2|USP16;;nc|ENSG00000156256|Q9Y5T5-3|USP16;;ENST00000485067.1_1_21:30426080-30426505:+|nuORF 5.326949596405029 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5248 26.576 59.0 752720.0 25 0 111520.0 + 11110 GEFRNDLQ 8 62 489.7354038232026 977.4562547132052 2 489.7351867556572 MULTI CID FTMS 0 0 0 5247 704276.5 0.3002796855592011 3 -0.0411586761474609 1 Unmodified _GEFRNDLQ_ REV__ENST00000327906.7_1_3:52445065-52445107:+|nuORF 22.736283301280096 0.5659792798204337 5 {[CA]|SS}{I|L}SD[QT]{I|L}Q 9 -1 + 50.485 0.0 0.0 5.1649 5.1649 81.463 0.0 0.0 0.0 6.478174818886373 13.455612550363796 6.478174818886373 3.0102999566398125 0 0.9247425010840048 0.0 0.0 0.7134679910804405 {[CA]|SS}{I|L}SD[QT]{I|L}Q;{[CA]|SS}D{I|L}S[QT]{I|L}Q;{[CA]|SS}{I|L}DS[QT]{I|L}Q;{[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}DS[WR]{I|L}Q;{[CA]|SS}{I|L}D[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}SW[RD]Q;{[CA]|SS}D{[CP]|[EA]}[KT]{I|L}Q;{[CA]|SS}{I|L}SW{[RE]|[WV]}N 5.1649;4.8569;4.6768;4.2068;4.079;4.0266;3.8988;3.1606;1.7455 -;-;-;-;-;-;-;-;- 173 + 1 2.626 39371.1 1.0 1385 3861 5247 SUDHL4_400M_050219_1,5248 SUDHL4_400M_050219_1,5248,GEFRNDLQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5249 26.577 54.0 1129900.0 25 0 134350.0 + 2070 APMSNPHTV 9 88 477.2291156169867 952.4436783007734 2 477.2290222048759 MULTI CID FTMS 0 0 0 5247 1155471.75 0.2512054296484223 -8 0.3241176605224609 2 Unmodified _APMSNPHTV_ REV__ENSG00000068697|ENST00000175091|LAPTM4A 28.486842064014134 0.1687311288560894 5 SPAM[KA][WY] 8 -1 + 58.958 0.0 0.0 6.1901 6.1901 83.756 0.0 0.0 0.0 15.853481135844874 2.496593117612776 2.496593117612776 2.496593117612776 0 1.1237125054200234 2.0 0.0 0.805462187404089 SPAM[KA][WY];SPAMP[HN]{[TV]|[{I|L}S]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))R]P{[WT]|[RM]} 6.1901;5.928;0.25872 -;-;- 260 + 1 2.626 55815.7 1.0 1386 3861 5247 SUDHL4_400M_050219_1,5249 SUDHL4_400M_050219_1,5249,APMSNPHTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5251 26.582 81.0 838270.0 25 0 101020.0 + 28400 RDGFDMFAQ 9 83 368.1924545092308 734.3703560852616 2 368.1926757693291 MULTI CID FTMS 0 0 0 5250 717208.25 0.9679291950123946 -2 0.0684185028076171 1 Unmodified _PSPHGLAG_ nc|ENSG00000175662|Q6ZVM7-2|TOM1L2;nc|ENSG00000175662|Q6ZVM7-5|TOM1L2;nc|ENSG00000175662|Q6ZVM7-3|TOM1L2;nc|ENSG00000175662|Q6ZVM7-4|TOM1L2;ENSG00000175662|ENST00000379504|TOM1L2 9.347437153973935 0.7675937258251505 5 [RD]G{M(Oxidation (M))|F}{I|L}Q 6 7 + 35.182 0.0 0.0 4.7908 4.7908 83.817 0.0 0.0 0.0 3.104028237526748 22.96388461952553 3.104028237526748 6.792972196075127 0 0.8807196863200843 0.0 0.0 0.0 [RD]G{M(Oxidation (M))|F}{I|L}Q;{[WT]|[RM]}{[MG]|[TS]}{I|L}Q;{[CA]|SS}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}R 4.7908;3.8658;1.3162 -;-;- 44 1 2.626 61393.8 1.0 1387 3862 5250 SUDHL4_400M_050219_1,5251 SUDHL4_400M_050219_1,5251,PSPHGLAG False False RDGFDMFAQ 26.581682 368.192675769329 102661.2734375 5250.0 nc|ENSG00000175662|Q6ZVM7-2|TOM1L2;;nc|ENSG00000175662|Q6ZVM7-5|TOM1L2;;nc|ENSG00000175662|Q6ZVM7-3|TOM1L2;;nc|ENSG00000175662|Q6ZVM7-4|TOM1L2;;ENSG00000175662|ENST00000379504|TOM1L2 -0.2719765305519104 3.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5252 26.596 800.0 130430.0 25 0 27659.0 -1 0 41 806.3932497553063 2416.157919866119 3 806.7287475466728 MULTI CID FTMS 0 0 0 5250 69576.6015625 0.7357075193747027 -1 0.005777359008789 2 5 {I|L} 1 -1 5.4846 0.0 0.0 0.22699 0.0 0.0 1439.9515732858438 860.0955294244749 2300.0471027103185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.22699 - 3 + 1 2.626 83453.5 0.5099999904632568 1388 3862 5250 SUDHL4_400M_050219_1,5252 SUDHL4_400M_050219_1,5252, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5253 26.607 639.0 254740.0 25 0 47117.0 + 17128 KLHDVELHQV 10 159 406.5595110383391 1216.6567037152174 3 406.5589477419853 MULTI CID FTMS 0 0 0 5250 112894.3828125 0.7976228759237076 -2 0.0684185028076171 3 Unmodified _KLHDVELHQV_ ENSG00000069966|ENST00000261837|GNB5;ENST00000560075.1_1_15:52439654-52476873:-|nuORF;nc|ENSG00000069966|O14775-2|GNB5;nc|ENSG00000069966|O14775-3|GNB5 32.89776655970281 0.2325650513667944 5 [H{I|L}][EP]VMK 7 7 16.317 0.0 0.0 1.3412 0.0 0.0 0.0 379.1779799205487 379.1779799205487 4.72367105084221 0.0 0.0 0.0 0 0.2302046884880938 0.6575773191777937 0.0 0.5 [H{I|L}][EP]VMK 1.3412 - 559 1 2.626 129913.9 1.0 1389 3862 5250 SUDHL4_400M_050219_1,5253 SUDHL4_400M_050219_1,5253,KLHDVELHQV False True KLHDVELHQV 26.606663 406.558947741985 632571.875 5250.0 ENST00000560075.1_1_15:52439654-52476873:-|nuORF;;nc|ENSG00000069966|O14775-2|GNB5;;ENSG00000069966|ENST00000261837|GNB5;;nc|ENSG00000069966|O14775-3|GNB5 8.144247690836588 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5254 26.609 94.0 717480.0 25 0 221900.0 + -1 RMAPALSGA 9 78 437.2345020204507 436.2272255538507 1 437.2291442751884 MULTI CID FTMS 0 0 0 5250 168137.484375 0.305031575794038 -1 0.005777359008789 4 ENST00000574593.1_1_16:2817540-2819884:+|nuORF;ENSG00000167978|ENST00000301740|SRRM2 5 [{I|L}A]AY 4 -1 + 21.427 0.0 0.0 4.9118 4.9118 83.474 0.0 0.0 0.0 1.9627248839266545 3.4678748622465605 1.9627248839266545 6.020599913279625 0 0.0 0.0 0.0 0.0 [{I|L}A]AY;[{I|L}A]YA 4.9118;3.5317 -;- 21 + 1 2.626 61782.8 1.0 1390 3862 5250 SUDHL4_400M_050219_1,5254 SUDHL4_400M_050219_1,5254, False False RMAPALSGA 26.608704 437.229144275188 15390350.0 5250.0 ENST00000574593.1_1_16:2817540-2819884:+|nuORF;;ENSG00000167978|ENST00000301740|SRRM2 3.1171383261680603 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5257 26.617 81.0 489300.0 25 0 43282.0 34976 SQLNFDSIS 9 82 505.7423934295204 1009.4702339258408 2 505.7419006228447 MULTI CID FTMS 0 0 0 5256 317660.0625 0.5053367192392827 -4 0.103799819946289 1 Unmodified _SQLNFDSIS_ ENSG00000012124|ENST00000085219|CD22;ENST00000600655.1_1_19:35832097-35832514:+|nuORF;ENST00000602123.1_1_19:35832028-35832514:+|nuORF;nc|ENSG00000012124|P20273-2|CD22;nc|ENSG00000012124|P20273-3|CD22;nc|ENSG00000012124|P20273-4|CD22;nc|ENSG00000012124|P20273-5|CD22 19.256988751693697 0.3154191944385105 5 {[TV]|[{I|L}S]}DQ 4 6 42.307 0.0 0.0 4.191 0.0 0.0 0.0 563.2450045221311 563.2450045221311 7.900129509512432 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}DQ 4.191 - 130 + 1 2.601 37150.4 1.0 1391 3864 5256 SUDHL4_400M_050219_1,5257 SUDHL4_400M_050219_1,5257,SQLNFDSIS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5258 26.621 199.0 308680.0 25 0 15169.0 + 12166 GQNKKVMIY 9 100 540.7977095352296 1079.5808661372591 2 540.7968017458916 MULTI CID FTMS 0 0 0 5256 254963.6875 0.5988309829661901 -3 0.0411586761474609 2 Unmodified _GQNKKVMIY_ ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5;nc|ENSG00000111642|Q14839-2|CHD4 48.345845343767074 0.0439967357579942 5 PSKM{I|L}Y 6 5 26.406 0.0 0.0 2.446 0.0 0.0 342.1899586408219 0.0 342.1899586408219 0.0 9.416309546812371 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.6747425010840047 PSKM{I|L}Y 2.446 - 384 1 2.601 55798.5 1.0 1392 3864 5256 SUDHL4_400M_050219_1,5258 SUDHL4_400M_050219_1,5258,GQNKKVMIY True True GQNKKVMIY 26.620879 540.796801745892 4537225.5 5256.0 ENSG00000111642|ENST00000544040|CHD4;;ENSG00000116254|ENST00000262450|CHD5;;nc|ENSG00000111642|Q14839-2|CHD4 4.73227326075236 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5261 26.631 202.0 434950.0 25 0 32517.0 + 26457 NTIDPSHPM 9 129 506.23177559675577 1010.4489982603116 2 506.2291442751884 MULTI CID FTMS 0 0 0 5260 291672.09375 0.0311008751890009 14 -0.3452930450439453 1 Unmodified _NTIDPSHPM_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 26.88365393820708 0.1891292719743517 5 {[QS]|[NT]}{I|L}[{M(Oxidation (M))|F}V]DCTV 9 6 + 48.13 0.0 0.0 4.7633 4.7633 84.143 0.0 0.0 0.0 16.29084289180043 9.384249941294064 9.384249941294064 7.781512503836431 0 0.3807196863200844 1.6989700043360187 1.055462187404089 0.0 {[QS]|[NT]}{I|L}[{M(Oxidation (M))|F}V]DCTV;{[QS]|[NT]}[{M(Oxidation (M))|F}V]{I|L}DCTV;{[QS]|[NT]}{I|L}[{M(Oxidation (M))|F}V]D[R{M(Oxidation (M))|F}];{[QS]|[NT]}[{M(Oxidation (M))|F}V]{I|L}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}D[PS][HN]N;{[QS]|[NT]}{I|L}[{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}D]|MM}GV;{[QS]|[NT]}[{M(Oxidation (M))|F}V]{I|L}{[{M(Oxidation (M))|F}D]|MM}GV;{[QS]|[NT]}T[C(Carbamidomethyl (C))K][QP]Y;{[QS]|[NT]}{I|L}[{M(Oxidation (M))|F}E][MT]GV;{[QS]|[NT]}HH{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GV 4.7633;3.9932;3.8345;3.0644;2.6331;1.8795;1.1094;0.92401;0.68348;0.38556 -;-;-;-;-;-;-;-;-;- 529 + 1 2.601 71194.1 1.0 1393 3866 5260 SUDHL4_400M_050219_1,5261 SUDHL4_400M_050219_1,5261,NTIDPSHPM False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5262 26.645 800.0 282730.0 25 0 87619.0 -1 0 162 470.2577160456374 469.2504395790374 1 470.2585021853447 MULTI CID FTMS 0 0 0 5260 184678.34375 0.5217297531892864 -17 0.5061664581298828 2 5 {[VA]|[{I|L}G]}{I|L}S 4 -1 11.928 0.0 0.0 2.542 0.0 0.0 0.0 96.005938196478 96.005938196478 -0.0615804805286011 0.0 -0.0615804805286011 0.0 0 0.0 1.154901959985743 0.0 0.0 {[VA]|[{I|L}G]}{I|L}S 2.542 - 63 1 2.601 175287.1 0.9700000286102296 1394 3866 5260 SUDHL4_400M_050219_1,5262 SUDHL4_400M_050219_1,5262, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5263 26.658 798.0 147410.0 25 0 54488.0 -1 0 103 567.1604644561602 566.1531879895601 1 567.1603271365166 MULTI CID FTMS 0 0 0 5260 145862.5 0.1410817508838918 -8 0.1969146728515625 3 5 Y 1 -1 15.485 0.0 0.0 2.735 0.0 0.0 385.0787536407304 0.0 385.0787536407304 0.0 5.105946495349691 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.735 - 36 + 1 2.601 95355.1 1.0 1395 3866 5260 SUDHL4_400M_050219_1,5263 SUDHL4_400M_050219_1,5263, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5264 26.672 800.0 108640.0 25 0 45080.0 + 24176 ALGAPPPPA 9 40 790.4462750055362 0 790.4470092654228 PEAK CID FTMS 0 0 0 5260 96634.5234375 0.6989084586824094 -5 0.05328369140625 4 Unmodified _LYWKWLLLWMK_ ENSG00000108604|ENST00000448276|SMARCD2;nc|ENSG00000108604|Q92925-2|SMARCD2 0.0 0.4761840153648598 5 APPP 4 11 13.532 0.0 0.0 0.85706 0.0 0.0 1030.5791212007225 183.07830225162343 1213.6574234523457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 APPP 0.85706 - 53 + 1 2.601 70877.4 0.7599999904632568 1396 3866 5260 SUDHL4_400M_050219_1,5264 SUDHL4_400M_050219_1,5264,LYWKWLLLWMK False False ALGAPPPPA 26.672239 790.447009265423 2257588.25 5260.0 ENSG00000108604|ENST00000448276|SMARCD2;;nc|ENSG00000108604|Q92925-2|SMARCD2 5.0824869473775225 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5265 26.686 800.0 361770.0 25 0 28266.0 -1 RAWDMRYYMNQ 11 150 775.3372783899891 1548.6600038467782 2 775.3356811404228 MULTI CID FTMS 0 0 0 5260 93432.625 0.0168759788578446 -5 0.05328369140625 5 Oxidation (M) _RAWDMRYYM(Oxidation (M))NQ_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF;ENST00000591149.5_1_19:2807001-2808381:+|nuORF 8.155526934196011 0.8366696279279818 5 [QA]HDEAGAQGGA{M(Oxidation (M))|F}YQ 15 -1 + 143.43 0.0 0.0 9.2617 9.2617 88.024 0.0 0.0 0.0 9.771212547196626 0.0 0.0 1.918855262389144 0 1.5114393726401687 0.0 2.1373453591370684 2.8173851849885576 [QA]HDEAGAQGGA{M(Oxidation (M))|F}YQ;[QA]HDEAGAQNA{M(Oxidation (M))|F}YK;[QA]HDEAQQGGA{M(Oxidation (M))|F}YQ;[QA]HDEAQQNA{M(Oxidation (M))|F}YK;[QA]HDEAGANGAA{M(Oxidation (M))|F}YQ;[QA]HDEAGA[AG]GGA{M(Oxidation (M))|F}YQ;[HD]QAEAGAQGGA{M(Oxidation (M))|F}YK;[QA]HDEAGANAGA{M(Oxidation (M))|F}YQ;[QA]HDEAGA[AG]NA{M(Oxidation (M))|F}YQ;[HD]QAEAGAQNA{M(Oxidation (M))|F}YQ 9.2617;9.1378;9.0241;8.9016;8.738;8.6786;8.6308;8.6243;8.5534;8.5069 -;-;-;-;-;-;-;-;-;- 159951 1 2.601 196881.3 0.7599999904632568 1397 3866 5260 SUDHL4_400M_050219_1,5265 SUDHL4_400M_050219_1,5265,RAWDMRYYMNQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5267 26.703 800.0 64256.0 25 0 8872.0 + 30063 QVAPVANSY 9 68 948.4794103663378 947.4721338997376 1 948.4800903201104 MULTI CID FTMS 0 0 0 5266 81220.765625 0.0458294652273197 13 -0.2841377258300781 1 Unmodified _QVAPVANSY_ ENSG00000157557|ENST00000360938|ETS2 86.33184430468982 0.0159826143231117 5 [VP]AN{I|L}ANSY 9 3 + 65.478 0.0 0.0 6.9108 6.9108 82.902 0.0 0.0 0.0 6.416506143517751 14.09256854528806 6.416506143517751 0.3959062302381255 0 0.2887254899964357 1.5228787452803376 0.0 1.6549471895720984 [VP]AN{I|L}ANSY;[VP]AQVANSY;{[QV]|[N{I|L}]|[RA]|[KV]}APVANSY;[VP]AAGVANSY;[VP]ANA{I|L}NSY;[VP]AN{I|L}AGGSY;[VP]AQG{I|L}NSY;[VP]AQVAGGSY;[VP]AAGG{I|L}NSY;[VP]AAN{I|L}NSY 6.9108;6.869;6.2336;5.9934;5.976;5.9389;5.9343;5.8971;5.5864;5.3406 -;-;+;-;-;-;-;-;-;- + 544 1 2.583 38666.4 0.5099999904632568 1398 3867 5266 SUDHL4_400M_050219_1,5267 SUDHL4_400M_050219_1,5267,QVAPVANSY True True QVAPVANSY 26.703279 948.48009032011 12351713.75 5266.0 ENSG00000157557|ENST00000360938|ETS2 7.778877258300781 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5268 26.707 202.0 276820.0 25 0 31389.0 + 29738 QPPFNNVEAL 10 67 564.7856359743882 1127.5567190155764 2 564.7859374880791 MULTI CID FTMS 0 0 0 5266 279924.5 0.9525185012289846 -1 0.0611553192138671 2 Unmodified _QPPFNNVEAL_ REV__ENSG00000166747|ENST00000299980|AP1G1;REV__ENST00000570052.1_1_16:71766963-71768485:-|nuORF;REV__nc|ENSG00000166747|O43747-2|AP1G1 10.073929032068715 0.6785112666868882 5 PQDT[WK]A{I|L} 8 -1 32.713 0.0 0.0 2.9012 0.0 0.0 170.06569453555772 0.0 170.06569453555772 0.0 9.244879295263289 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.805462187404089 PQDT[WK]A{I|L} 2.9012 - 55 + 1 2.583 48864.8 1.0 1399 3867 5266 SUDHL4_400M_050219_1,5268 SUDHL4_400M_050219_1,5268,QPPFNNVEAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5269 26.712 248.0 245110.0 25 0 18290.0 + 42009 VQQPGQTNF 9 110 509.75162741157465 1017.4887018899492 2 509.7515136599541 MULTI CID FTMS 0 0 0 5266 261776.171875 0.3560411931117847 -5 0.1086616516113281 3 Unmodified _VQQPGQTNF_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 48.345845343767074 0.0439967357579942 5 [AG]GPTD{M(Oxidation (M))|F} 7 6 31.397 0.0 0.0 3.0857 0.0 0.0 0.0 369.1863696968431 369.1863696968431 -0.6147729875137209 0.0 -0.6147729875137209 0.0 0 0.0 1.3979400086720375 0.9749073637206092 0.0 [AG]GPTD{M(Oxidation (M))|F} 3.0857 - 681 1 2.583 53171.9 1.0 1400 3867 5266 SUDHL4_400M_050219_1,5269 SUDHL4_400M_050219_1,5269,VQQPGQTNF True True VQQPGQTNF 26.71176 509.751513659954 3961316.25 5266.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 6.607445557912191 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5270 26.718 358.0 252320.0 25 0 25177.0 33226 SFMDVSNPFYQ 11 94 675.7894848764444 1349.5644168196886 2 675.7891113162041 MULTI CID FTMS 0 0 0 5266 252651.84375 0.7764318430767866 -1 0.0611553192138671 4 Oxidation (M) _SFM(Oxidation (M))DVSNPFYQ_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 45.739877483867886 0.1412225664835785 5 [HD]EAQQNA{M(Oxidation (M))|F}YQ 11 7 + 79.844 0.0 0.0 5.9162 5.9162 88.675 0.0 0.0 0.0 3.4768294003359586 68.58454165422322 3.4768294003359586 9.128498242810991 0 1.3807196863200843 0.0 0.3252574989159953 0.7614393726401688 [HD]EAQQNA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QNA{M(Oxidation (M))|F}YQ;[HD]EAQQGGA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]NA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QGGA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}YQ;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QNA{M(Oxidation (M))|F}YQ;{[ES]|[DT]|[{I|L}C]}[HA]{[{M(Oxidation (M))|F}H]|[RQ]}NA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QGGA{M(Oxidation (M))|F}YQ 5.9162;5.2398;5.2398;5.2398;4.5657;4.5657;4.5657;4.3752;3.7887;3.6961 -;-;-;-;-;-;-;-;-;- 654 1 2.583 72516.4 1.0 1401 3867 5266 SUDHL4_400M_050219_1,5270 SUDHL4_400M_050219_1,5270,SFMDVSNPFYQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5271 26.721 114.0 825810.0 25 0 131500.0 33954 SLHPGSSAL 9 100 434.7296441964654 0 434.7298156619072 PEAK CID FTMS 0 0 0 5266 145544.25 1.0 0 0.0 5 Unmodified _SLHPGSSAL_ ENSG00000060982|ENST00000261192|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;nc|ENSG00000060982|P54687-5|BCAT1 7.910154910731844 0.3362437653303669 5 M 1 9 0.3786 0.0 0.0 0.043646 0.0 0.0 452.2218788696902 281.15070520572505 733.3725840754153 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.043646 - 2 + 1 2.583 81346.3 1.0 1402 3867 5266 SUDHL4_400M_050219_1,5271 SUDHL4_400M_050219_1,5271,SLHPGSSAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5272 26.734 800.0 263610.0 25 0 10546.0 + 15774 ISEAAASTSTI 11 213 525.7697813308283 1049.5250097284566 2 525.7694579958916 MULTI CID FTMS 0 0 0 5266 146124.703125 0.2117814735038464 -4 0.077178955078125 6 Unmodified _ISEAAASTSTI_ REV__ENSG00000124214|ENST00000371856|STAU1 60.07390631473393 0.0688452368411198 5 {[QN]|[E{I|L}]|[KN]}SG{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GNT{I|L} 10 -1 + 73.532 0.0 0.0 7.0063 7.0063 90.98 0.0 0.0 0.0 8.85654121476712 16.532125137753447 8.85654121476712 8.76287494579978 0 1.274227503252014 1.3979400086720375 0.8033121444636098 0.9604093769761876 {[QN]|[E{I|L}]|[KN]}SG{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GNT{I|L};{[QN]|[E{I|L}]|[KN]}SG{[MS]|[{M(Oxidation (M))|F}A]}VNT{I|L};{[NV]|[RG]}RNYGNT{I|L};{[QN]|[E{I|L}]|[KN]}SG{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGGT{I|L};{[QN]|[E{I|L}]|[KN]}SG{[MS]|[{M(Oxidation (M))|F}A]}VGGT{I|L};{[NV]|[RG]}RGGYGNT{I|L};{[NV]|[RG]}RNYGGGT{I|L};AAARNYGNT{I|L};{[QS]|[NT]}Q[R{M(Oxidation (M))|F}]GNT{I|L};{[TV]|[{I|L}S]}[WP]YGNT{I|L} 7.0063;6.1713;6.1624;6.1331;5.2981;5.285;5.285;5.2284;5.0839;5.0098 -;-;-;-;-;-;-;-;-;- 5756 1 2.583 160910.6 0.6800000071525574 1403 3867 5266 SUDHL4_400M_050219_1,5272 SUDHL4_400M_050219_1,5272,ISEAAASTSTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5273 26.748 800.0 202900.0 25 0 53330.0 + 8865 FACCHSPY 8 139 464.1760291744735 0 464.1757690310478 PEAK CID FTMS 0 0 0 5266 105694.1328125 0.7951792520611766 -1 0.0611553192138671 7 Unmodified _FACCHSPY_ REV__ENSG00000138039|ENST00000294954|LHCGR;REV__ENSG00000165409|ENST00000298171|TSHR;REV__ENSG00000170820|ENST00000406846|FSHR;REV__nc|ENSG00000165409|P16473|TSHR;REV__nc|ENSG00000170820|P23945-3|FSHR;REV__nc|ENSG00000170820|P23945-4|FSHR 6.354104778181461 0.5763711549229614 5 A 1 -1 3.9794 0.0 0.0 0.42958 0.0 0.0 784.2262516089095 68.05151544742421 852.2777670563337 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.42958 + + 26 + 1 2.583 130899.7 0.5400000214576721 1404 3867 5266 SUDHL4_400M_050219_1,5273 SUDHL4_400M_050219_1,5273,FACCHSPY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5274 26.756 414.0 262930.0 25 0 42928.0 + 19612 LGAVSGIAV 9 142 393.7395675930938 0 393.7393981814384 PEAK CID FTMS 0 0 0 5266 95437.4921875 1.0 0 0.0 8 Unmodified _LGAVSGIAV_ REV__ENSG00000013293|ENST00000231706|SLC7A14 28.486842064014134 0.1241350795510704 5 A 1 -1 11.154 0.0 0.0 1.42 0.0 0.0 544.320583084822 167.08320032291252 711.4037834077345 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 A 1.42 + + 70 + 1 2.583 88621.0 1.0 1405 3867 5266 SUDHL4_400M_050219_1,5274 SUDHL4_400M_050219_1,5274,LGAVSGIAV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5276 26.766 377.0 155770.0 25 0 23294.0 + -1 NEGVRCRCIAG 11 79 617.794349736781 0 617.7936889529228 PEAK CID FTMS 0 0 0 5275 46867.4921875 0.5953887692682542 1 -0.0399608612060546 1 Carbamidomethyl (C) _NEGVRC(Carbamidomethyl (C))RCIAG_ REV__ENSG00000081148|ENST00000193391|IMPG2 19.361941925380144 0.3610768343261827 5 {I|L} 1 -1 13.411 0.0 0.0 1.0872 0.0 0.0 974.4196188077432 143.04693018131096 1117.4665489890542 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {I|L} 1.0872 + + 7 + 1 2.539 48454.9 1.0 1406 3868 5275 SUDHL4_400M_050219_1,5276 SUDHL4_400M_050219_1,5276,NEGVRCRCIAG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5277 26.768 107.0 579310.0 25 0 27911.0 + 2619 ASSPEHPEL 9 98 483.730502657321 965.446452381442 2 483.7301513552666 MULTI CID FTMS 0 0 0 5275 570868.75 0.3343888871845062 -9 0.2536544799804687 2 Unmodified _ASSPEHPEL_ ENSG00000068308|ENST00000376488|OTUD5;nc|ENSG00000068308|Q96G74-2|OTUD5;nc|ENSG00000068308|Q96G74-3|OTUD5;nc|ENSG00000068308|Q96G74-4|OTUD5;nc|ENSG00000068308|Q96G74|OTUD5 39.957323273325 0.0756908302845263 5 {[SA]|[TG]}SPEH[EP]{I|L} 9 0 + 45.288 0.0 0.0 4.6909 4.6909 81.243 0.0 0.0 0.0 31.09747782948257 6.33389544394749 6.33389544394749 3.99166239860314 0 0.0 1.6989700043360187 0.6237125054200234 0.0 + + {[SA]|[TG]}SPEH[EP]{I|L};{[SA]|[TG]}SP{M(Oxidation (M))|F}{I|L}[EC]{I|L};{[SA]|[TG]}SP{[SA]|[TG]}[KT]A{M(Oxidation (M))|F};{[SA]|[TG]}SP{[NV]|[RG]}YTQ;[MN][RN]{[RE]|[WV]}{M(Oxidation (M))|F} 4.6909;4.2775;2.71;2.4324;0.53928 +;-;-;-;- + 250 + 1 2.539 53901.1 1.0 1407 3868 5275 SUDHL4_400M_050219_1,5277 SUDHL4_400M_050219_1,5277,ASSPEHPEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5278 26.782 800.0 112170.0 25 0 28476.0 -1 0 52 1178.4824506850557 3532.425522655368 3 1178.816943347454 MULTI CID FTMS 0 0 0 5275 172160.296875 0.2083843943161911 -8 0.2465133666992187 3 5 YG 2 -1 10.969 0.0 0.0 0.31053 0.0 0.0 1984.7007434579048 1324.630576135664 3309.331319593569 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.31053 - 26 + 1 2.539 79799.1 0.5899999737739563 1408 3868 5275 SUDHL4_400M_050219_1,5278 SUDHL4_400M_050219_1,5278, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5279 26.796 800.0 141550.0 25 0 11052.0 + 3487 CKECRKCFYQ 10 116 739.8184534220052 1477.6223539108105 2 739.8173095583916 MULTI CID FTMS 0 0 0 5275 110940.53125 0.5637352361974192 -3 0.134490966796875 4 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKC(Carbamidomethyl (C))FYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 45.69961567697781 0.105390671673896 5 {[QG]|[NA]}G[HS]NQQNA{M(Oxidation (M))|F}YQ 13 10 + 104.56 0.0 0.0 7.0763 7.0763 86.585 0.0 0.0 0.0 5.695410054739824 38.3953206452756 5.695410054739824 3.0102999566398125 0 1.064909327626439 0.619788758288394 1.8169015600442573 2.6861818737241734 {[QG]|[NA]}G[HS]NQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[NS]HQQNA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QQNA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[NS]HQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HS]NQQGGA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HS]NQ[AG]NA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HS]N[AG]QNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HS]GGQQNA{M(Oxidation (M))|F}YQ;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[MT]NQQNA{M(Oxidation (M))|F}YQ 7.0763;6.8726;6.6804;6.5558;6.4766;6.4623;6.4623;6.4623;6.4623;6.2985 -;-;-;-;-;-;-;-;-;- 6185 1 2.539 87432.3 0.699999988079071 1409 3868 5275 SUDHL4_400M_050219_1,5279 SUDHL4_400M_050219_1,5279,CKECRKCFYQ True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5281 26.8 2.1 14327000.0 25 0 1988800.0 + 33812 SLDQPTQTV 9 55 494.75113786294327 987.4877227926866 2 494.7512695193291 MULTI CID FTMS 0 0 0 5280 33912192.0 0.8891240855932825 1 -0.0191059112548828 1 Unmodified _SLDQPTQTV_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 20.453626601364224 0.2830276176381075 5 {[TV]|[{I|L}S]}D[KT]Y 6 5 31.655 0.0 0.0 3.2057 0.0 0.0 0.0 277.09615720114283 277.09615720114283 9.220449851406514 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 {[TV]|[{I|L}S]}D[KT]Y 3.2057 - 52 1 2.539 31063.1 1.0 1410 3869 5280 SUDHL4_400M_050219_1,5281 SUDHL4_400M_050219_1,5281,SLDQPTQTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5282 26.801 26.0 1556400.0 25 0 157920.0 + 13197 HGIDPTGTY 9 63 480.7249464247716 959.4353399163432 2 480.7249633669853 MULTI CID FTMS 0 0 0 5280 2659522.5 0.655314830589182 2 -0.0227203369140625 2 Unmodified _HGIDPTGTY_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF 67.34385681178166 0.0221257235307089 5 {[HG]|PP}{I|L}DPTGTY 9 0 + 62.457 0.0 0.0 6.5098 6.5098 88.732 0.0 0.0 0.0 4.762036441594191 46.25955625825256 4.762036441594191 6.7609125905568135 0 0.8807196863200843 0.0 1.3807196863200843 0.0 + + {[HG]|PP}{I|L}DPTGTY;{[HG]|PP}{I|L}DPGTTY;[YT]G[W{I|L}]GTY;{[WT]|[RM]}[MT]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y;[QA][PS]G[TP]G[{M(Oxidation (M))|F}V] 6.5098;5.8051;4.6913;1.4827;0.53936 +;-;-;-;- + 169 1 2.539 36418.0 1.0 1411 3869 5280 SUDHL4_400M_050219_1,5282 SUDHL4_400M_050219_1,5282,HGIDPTGTY True True HGIDPTGTY 26.800916 480.724963366985 71875008.0 5280.0 ENSG00000196230|ENST00000327892|TUBB;;ENSG00000104833|ENST00000264071|TUBB4A;;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;;ENSG00000188229|ENST00000340384|TUBB4B;;ENST00000518096.1_1_8:30209523-30210210:+|nuORF 8.883152643839518 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5283 26.815 800.0 146040.0 25 0 6641.3 + -1 LVMFSFSLTQ 10 128 594.804512571957 1187.594472210714 2 595.3036987185478 MULTI CID FTMS 0 0 0 5280 146032.0 0.4201675050792083 -12 0.4287319183349609 3 Oxidation (M) _LVM(Oxidation (M))FSFSLTQ_ REV__ENSG00000126838|ENST00000261336|PZP;REV__nc|ENSG00000126838|P20742-2|PZP 6.723162845929126 0.6955379296933136 5 [{I|L}V]N[HM][HM]N 8 -1 28.166 0.0 0.0 2.3717 0.0 0.0 0.0 208.1207532988577 208.1207532988577 16.17599686953519 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.805462187404089 [{I|L}V]N[HM][HM]N 2.3717 - 63 1 2.539 91223.3 0.9900000095367432 1412 3869 5280 SUDHL4_400M_050219_1,5283 SUDHL4_400M_050219_1,5283,LVMFSFSLTQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5286 26.83 402.0 686820.0 25 0 79524.0 + -1 VQTEVNREL 9 121 544.2920017210974 543.2847252544974 1 544.2918578982353 MULTI CID FTMS 0 0 0 5285 173703.375 0.6572431017951454 -4 0.1321144104003906 1 ENSG00000117475|ENST00000367808|BLZF1 5 [AG]TPT 5 -1 40.471 0.0 0.0 7.4493 0.0 0.0 0.0 113.05371264146928 113.05371264146928 9.817627884310903 0.0 0.0 0.0 0 0.2742275032520141 2.0 1.25 0.0 [AG]TPT 7.4493 - 344 1 2.539 214324.3 1.0 1413 3871 5285 SUDHL4_400M_050219_1,5286 SUDHL4_400M_050219_1,5286, False False VQTEVNREL 26.829955 544.291857898235 2972806.5 5285.0 ENSG00000117475|ENST00000367808|BLZF1 1.6128151019414263 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5287 26.837 413.0 199580.0 25 0 14641.0 + -1 LMYCGNSPLK 10 102 591.7833548679441 1181.5521568026882 2 591.7845947146416 MULTI CID FTMS 0 0 0 5285 164279.03125 0.447502223708336 -9 0.2407760620117187 2 Carbamidomethyl (C) _LMYC(Carbamidomethyl (C))GNSPLK_ REV__ENSG00000176641|ENST00000312828|RNF152 8.155526934196011 0.6889124077178598 5 S[EP]{I|L}K 5 -1 14.394 0.0 0.0 1.2183 0.0 0.0 609.232467937257 0.0 609.232467937257 0.0 4.861500069891349 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.2215141619232908 S[EP]{I|L}K 1.2183 - 164 + 1 2.539 63864.4 1.0 1414 3871 5285 SUDHL4_400M_050219_1,5287 SUDHL4_400M_050219_1,5287,LMYCGNSPLK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5289 26.841 14.0 2902400.0 25 0 214810.0 + 2071 APMSNPHTV 9 77 477.2291156169867 952.4436783007734 2 477.2291442751884 MULTI CID FTMS 0 0 0 5288 4570994.0 0.9937573217955008 3 -0.0235595703125 1 Unmodified _APMSNPHTV_ REV__ENSG00000068697|ENST00000175091|LAPTM4A 26.88365393820708 0.1891292719743517 5 SPAMP[HN]{[TV]|[{I|L}S]} 9 -1 + 57.069 0.0 0.0 5.9918 5.9918 94.025 0.0 0.0 0.0 37.860527937172606 1.1607435312808434 1.1607435312808434 57.068715476696354 0 1.3182503180159344 2.0 0.4247425010840047 0.3494850021680094 SPAMP[HN]{[TV]|[{I|L}S]} 5.9918 - 198 + 1 2.495 38646.5 1.0 1415 3872 5288 SUDHL4_400M_050219_1,5289 SUDHL4_400M_050219_1,5289,APMSNPHTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5291 26.857 653.0 111500.0 25 0 8388.1 + 44456 YMSGYHTGY 9 91 539.7188598513603 0 539.7188598513603 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _YMSGYHTGY_ ENSG00000172062|ENST00000380707|SMN1;ENSG00000205571|ENST00000380743|SMN2;ENST00000509805.5_1_5:69363243-69366626:+|nuORF;ENST00000518504.5_1_5:70238322-70242051:+|nuORF;nc|ENSG00000205571|Q16637-2|SMN1;nc|ENSG00000205571|Q16637-3|SMN1;nc|ENSG00000205571|Q16637-4|SMN1 28.486842064014134 0.1241350795510704 5 MYGPSM 6 7 12.568 0.0 0.0 1.1665 0.0 0.0 181.0768665759643 227.06833826236564 408.14520483833 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.2614393726401688 0.0 MYGPSM 1.1665 - 57 + 1 2.495 62725.4 1.0 1416 3873 5290 SUDHL4_400M_050219_1,5291 SUDHL4_400M_050219_1,5291,YMSGYHTGY True True YMSGYHTGY 26.857184 539.71885985136 1079502.0 5290.0 ENSG00000205571|ENST00000380743|SMN2;;nc|ENSG00000205571|Q16637-2|SMN1;;nc|ENSG00000205571|Q16637-4|SMN1;;nc|ENSG00000205571|Q16637-3|SMN1;;ENSG00000172062|ENST00000380707|SMN1;;ENST00000518504.5_1_5:70238322-70242051:+|nuORF;;ENST00000509805.5_1_5:69363243-69366626:+|nuORF 3.2961172262827554 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5294 26.873 422.0 224080.0 25 0 29724.0 39616 VDNKMPGCSPK 11 96 588.2812999179747 0 588.2829467654228 PEAK CID FTMS 0 0 0 5293 193571.359375 1.0 0 0.0 1 Unmodified _VDNKMPGCSPK_ ENST00000577273.1_1_17:66253064-66253124:+|nuORF 10.799506525563784 0.4428795054024277 5 MN 2 10 11.81 0.0 0.0 1.0055 0.0 0.0 587.2755382130994 339.1677645318969 926.4433027449963 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6861818737241735 MN 1.0055 - 86 + 1 2.495 73549.0 1.0 1417 3875 5293 SUDHL4_400M_050219_1,5294 SUDHL4_400M_050219_1,5294,VDNKMPGCSPK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5296 26.886 633.0 296880.0 25 0 32925.0 22919 LSDQYKQE 8 171 505.7423934295204 1009.4702339258408 2 505.7417175173759 MULTI CID FTMS 0 0 0 5295 191591.171875 0.304785100993053 8 -0.2247810363769531 1 Unmodified _LSDQYKQE_ ENSG00000117724|ENST00000366955|CENPF 39.957323273325 0.2350051964751539 5 {[TV]|[{I|L}S]}DQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NTV 9 4 {[TV]|[{I|L}S]} + + 48.408 25.273 12.629 4.7954 4.7954 58.562 0.0 0.0 0.0 0.0 36.98808777218338 0.0 0.0 0 1.9731975075880328 0.0 1.416386562212267 0.9731975075880328 {[TV]|[{I|L}S]}DQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NTV 4.7954 - 2201 + 1 2.495 146408.4 1.0 1418 3876 5295 SUDHL4_400M_050219_1,5296 SUDHL4_400M_050219_1,5296,LSDQYKQE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5297 26.9 800.0 109820.0 25 0 9162.0 -1 0 108 870.3867675662041 0 870.3867675662041 PEAK CID FTMS 0 0 0 -1 0 2 5 QD{I|L}STQ 6 -1 32.898 0.0 0.0 1.8921 0.0 0.0 868.3523792712768 195.07810388736564 1063.4304831586426 0.0 0.0 0.0 0.0 0 0.0 0.0 1.9049471895720984 0.6549471895720984 QD{I|L}STQ 1.8921 - 1982 + 1 2.495 63115.1 0.8899999856948853 1419 3876 5295 SUDHL4_400M_050219_1,5297 SUDHL4_400M_050219_1,5297, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5299 26.915 646.0 197820.0 25 0 17963.0 + 41990 VQNPSSSENVL 11 134 587.2911597021631 1172.567766471126 2 587.2919799685478 MULTI CID FTMS 0 0 0 5298 207414.9375 1.0 0 0.0 1 Unmodified _VQNPSSSENVL_ REV__chr14:75517605-75525084|23|24.52|0.01|11.03|+|1|TE_info:MLT1F1,MLT1F1_dup2493,ERVL-MaLR,LTR,donor,+,75517356,75517605|None,BATF|3 24.99096001346401 0.505407273373304 5 {NN|[MP]|[D{I|L}]|[EV]}N{I|L}NTSANV{I|L} 11 -1 + 75.826 0.0 0.0 6.4667 6.4667 88.112 0.0 0.0 0.0 1.3469857389745528 40.37554399253901 1.3469857389745528 6.105935974288414 0 0.6382104921644451 0.0 1.3494850021680094 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}N{I|L}NTSANV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P[WC(Carbamidomethyl (C))]SANV{I|L};{NN|[MP]|[D{I|L}]|[EV]}N{I|L}NTSAGGV{I|L};{NN|[MP]|[D{I|L}]|[EV]}GG{I|L}NTSANV{I|L};{NN|[MP]|[D{I|L}]|[EV]}N{I|L}GGTSANV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DE[QA]SANV{I|L};[NP]{I|L}[WC(Carbamidomethyl (C))]SANV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}P[WC(Carbamidomethyl (C))]SAGGV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PD{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}NV{I|L};[NP]T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TSANV{I|L} 6.4667;5.9459;5.6882;5.6882;5.6882;5.4846;5.3108;5.1643;5.0998;4.9893 -;-;-;-;-;-;-;-;-;- 2079 1 2.495 100927.5 1.0 1420 3877 5298 SUDHL4_400M_050219_1,5299 SUDHL4_400M_050219_1,5299,VQNPSSSENVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5300 26.92 241.0 408780.0 25 0 153150.0 -1 0 106 374.23576147386825 373.22848500726826 1 377.2368041872978 MULTI CID FTMS 0 0 0 5298 142704.34375 0.7269545322597347 -2 0.0386695861816406 2 5 D 1 -1 13.495 0.0 0.0 3.6157 0.0 0.0 240.190046141837 0.0 240.190046141837 0.0 1.2763625255165325 0.0 0.0 0 0.0 0.0 0.0 0.0 D 3.6157 - 12 + 1 2.495 79778.4 1.0 1421 3877 5298 SUDHL4_400M_050219_1,5300 SUDHL4_400M_050219_1,5300, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5302 26.924 15.0 2241500.0 25 0 242100.0 -1 RAWDMRYYMNQ 11 45 775.3372783899891 1548.6600038467782 2 775.3369018435478 MULTI CID FTMS 0 0 0 5301 3777098.75 0.6822267773060134 7 -0.2427825927734375 1 Oxidation (M) _RAWDM(Oxidation (M))RYYMNQ_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF;ENST00000591149.5_1_19:2807001-2808381:+|nuORF 1.3295316138638542 0.8688751186870782 5 AQQNA{M(Oxidation (M))|F}YQ 8 -1 54.329 0.0 0.0 3.5081 0.0 0.0 580.22368056465 0.0 580.22368056465 0.0 33.53199407328319 0.0 0.0 0 1.3182503180159344 0.0 0.0 0.0 AQQNA{M(Oxidation (M))|F}YQ 3.5081 - 195 1 2.456 31046.3 1.0 1422 3878 5301 SUDHL4_400M_050219_1,5302 SUDHL4_400M_050219_1,5302,RAWDMRYYMNQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5303 26.938 800.0 171660.0 25 0 12229.0 + 10943 GALDGGAL 8 141 673.3518260677911 672.344549601191 1 673.3519164919853 MULTI CID FTMS 0 0 0 5301 155253.0 0.4738702971094088 4 -0.1243972778320312 2 Unmodified _GALDGGAL_ REV__chr10:102401710-102402048|10|16.7|0.25|6.03|+|0|None,NFKB2|1;REV__ENSG00000077150|ENST00000661543|NFKB2;REV__nc|ENSG00000077150|Q00653-4|NFKB2 38.15118350030904 0.2652218139009398 5 [Q{I|L}]DNA{I|L} 6 -1 + 55.682 0.0 0.0 8.2818 8.2818 87.232 0.0 0.0 0.0 7.347494961522152 14.69273760456403 7.347494961522152 1.8571865870205075 0 0.6643943297944485 0.7958800173440752 1.2614393726401687 0.8243923658886186 [Q{I|L}]DNA{I|L};[Q{I|L}]DGGA{I|L};[Q{I|L}]DGQ{I|L};[AG]{I|L}DNA{I|L};[AG]EVNA{I|L};[AG]{I|L}DGQ{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VNA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VGGA{I|L};[AG]EVGQ{I|L};[AG]{I|L}DGGA{I|L} 8.2818;8.0055;7.7961;7.1889;6.6757;6.3145;6.177;5.9007;5.8013;5.7189 -;-;-;-;-;-;-;-;-;+ + 510 1 2.456 101296.3 1.0 1423 3878 5301 SUDHL4_400M_050219_1,5303 SUDHL4_400M_050219_1,5303,GALDGGAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5305 26.956 800.0 120570.0 25 0 4530.2 + 40722 VLHQDIQQV 9 147 540.2961323044811 1078.5777116757622 2 540.7972289919853 MULTI CID FTMS 0 0 0 5304 111926.34375 0.4245063673412787 -2 0.0385951995849609 1 Unmodified _VLHQDIQQV_ ENSG00000177182|ENST00000325897|CLVS1;nc|ENSG00000177182|Q8IUQ0-2|CLVS1 34.40172386719151 0.1061884637610825 5 {NN|[MP]|[D{I|L}]|[EV]}QHV{I|L}QQV 9 4 + 46.782 0.0 0.0 4.3374 4.3374 79.444 0.0 0.0 0.0 3.428389194288485 5.0662709749559625 3.428389194288485 3.428389194288485 0 1.013879331962458 0.7958800173440752 0.430884548956689 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}QHV{I|L}QQV;[AG]VEHV{I|L}QQV;{NN|[MP]|[D{I|L}]|[EV]}QHV{I|L}[AG]QV;{NN|[MP]|[D{I|L}]|[EV]}[AG]HV{I|L}QQV;[AG]D{I|L}HV{I|L}QQV;{[QV]|[N{I|L}]|[RA]|[KV]}EHV{I|L}QQV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}V[{M(Oxidation (M))|F}T]QV;[AG]DH{I|L}V{I|L}QQV;[AG]VEHV{I|L}[AG]QV;[AG]V{I|L}HD{I|L}QQV 4.3374;4.0195;3.4836;3.4836;3.3715;3.3204;3.2434;3.2332;3.1698;3.1041 -;-;-;-;-;-;-;-;-;- 788 1 2.456 78590.4 0.9399999976158142 1424 3879 5304 SUDHL4_400M_050219_1,5305 SUDHL4_400M_050219_1,5305,VLHQDIQQV True True VLHQDIQQV 26.956427 540.797228991985 5396771.5 5304.0 ENSG00000177182|ENST00000325897|CLVS1;;nc|ENSG00000177182|Q8IUQ0-2|CLVS1 5.763619422912598 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5306 26.97 800.0 176500.0 25 0 17683.0 20854 LMEVLMMSTQ 10 190 394.8579007311714 0 394.8577758669853 PEAK CID FTMS 0 0 0 5304 114724.96875 1.0 0 0.0 2 Unmodified _LMEVLMMSTQ_ ENSG00000130939|ENST00000343090|UBE4B;nc|ENSG00000130939|O95155-2|UBE4B;nc|ENSG00000130939|O95155-3|UBE4B;nc|ENSG00000130939|O95155-4|UBE4B 5.731851221503515 0.3961065659209837 5 SE 2 9 7.7866 0.0 0.0 0.98852 0.0 0.0 306.44778280824283 262.1453951471313 568.5931779553741 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 SE 0.98852 - 47 + 1 2.456 113615.9 0.7300000190734863 1425 3879 5304 SUDHL4_400M_050219_1,5306 SUDHL4_400M_050219_1,5306,LMEVLMMSTQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5308 26.976 169.0 231750.0 25 0 14135.0 12460 GVAAGPHEPPS 11 83 509.75162741157465 1017.4887018899492 2 509.7504150271416 MULTI CID FTMS 0 0 0 5307 151360.140625 0.2058645929142305 8 -0.3564605712890625 1 Unmodified _GVAAGPHEPPS_ ENST00000348261.10_1_16:1271144-1271678:+|nuORF 18.1463463914782 0.6576820063886638 5 [AG]VQ 4 9 24.047 0.0 0.0 2.3633 0.0 0.0 0.0 659.2805164253587 659.2805164253587 5.534324950063972 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.4247425010840047 [AG]VQ 2.3633 - 113 1 2.456 36691.5 1.0 1426 3880 5307 SUDHL4_400M_050219_1,5308 SUDHL4_400M_050219_1,5308,GVAAGPHEPPS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5309 26.985 548.0 361040.0 25 0 21784.0 + -1 SFARGCQPCAF 11 149 650.7815569793606 1299.5485610255212 2 650.7809326052666 MULTI CID FTMS 0 0 0 5307 388941.46875 0.238974178763611 -4 0.0975761413574218 2 2 Carbamidomethyl (C) _SFARGC(Carbamidomethyl (C))QPC(Carbamidomethyl (C))AF_ REV__ENSG00000083812|ENST00000196482|ZNF324 17.11289562659939 0.6791789249425932 5 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F} 11 -1 + 100.53 0.0 0.0 7.7359 7.7359 91.068 0.0 0.0 0.0 6.64822462871868 7.501705764563553 6.64822462871868 6.64822462871868 0 0.9247425010840048 0.721246399047171 1.066901560044258 1.841129063296272 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F};[AG]NA{M(Oxidation (M))|F}H[HS]QNA{M(Oxidation (M))|F};[HS]GPDEAQQNA{M(Oxidation (M))|F};[PS]GHDEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}H[HS]QNA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EA[AG]QNA{M(Oxidation (M))|F} 7.7359;7.2244;7.0335;7.0335;7.0335;6.7668;6.7214;6.6252;6.5961;6.5243 -;-;-;-;-;-;-;-;-;- 7147 1 2.456 146450.3 1.0 1427 3880 5307 SUDHL4_400M_050219_1,5309 SUDHL4_400M_050219_1,5309,SFARGCQPCAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5310 26.999 800.0 182880.0 25 0 12199.0 + + 27268 YGKNTIAY 8 169 465.2399480992383 928.4653432652766 2 465.2416564822197 MULTI CID FTMS 0 0 0 5307 132534.09375 0.8597829687561451 2 -0.0738372802734375 3 Unmodified _PHETVLAY_ ENSG00000163950|ENST00000489418|SLBP;nc|ENSG00000163950|Q14493-2|SLBP 28.17323086031832 0.4514957916281387 5 [{I|L}T]T[{M(Oxidation (M))|F}T]{I|L}AY 8 -1 + 26.552 0.0 0.0 2.8597 2.8597 76.179 0.0 0.0 0.0 1.004980810712368 15.301943369327628 1.004980810712368 3.3994806169435066 0 0.8935078169319297 1.0457574905606752 0.9076960356474644 0.0 [{I|L}T]T[{M(Oxidation (M))|F}T]{I|L}AY;[{I|L}T][WY]{I|L}AY;[{I|L}T]T[{M(Oxidation (M))|F}T]A{I|L}Y;[{I|L}T]{[{M(Oxidation (M))|F}C]|[YS]}V{I|L}AY;[{I|L}T]H[DP]{I|L}AY;[{I|L}V]{M(Oxidation (M))|F}CT{I|L}AY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VCT{I|L}AY;[{I|L}T][WY]A{I|L}Y;[KG]YNT{I|L}AY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[CT]|[{M(Oxidation (M))|F}G]}V{I|L}AY 2.8597;2.4936;2.2141;2.1562;2.0623;2.0595;2.0217;1.8479;1.8329;1.6233 -;-;-;-;-;-;-;-;-;- 738 1 2.456 112997.7 0.7900000214576721 1428 3880 5307 SUDHL4_400M_050219_1,5310 SUDHL4_400M_050219_1,5310,PHETVLAY False False YGKNTIAY 26.99899 465.24165648222 774320.125 5307.0 ENSG00000163950|ENST00000489418|SLBP;;nc|ENSG00000163950|Q14493-2|SLBP 4.624767939249675 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5311 27.013 800.0 107100.0 25 0 8669.3 -1 AAKVCHCIGL 10 117 564.7856359743882 1127.5567190155764 2 564.7839843630791 MULTI CID FTMS 0 0 0 5307 118804.84375 0.4042654776823525 11 -0.3993549346923828 4 2 Carbamidomethyl (C) _AAKVC(Carbamidomethyl (C))HC(Carbamidomethyl (C))IGL_ ENST00000502953.1_1_5:54623411-54635894:+|nuORF 7.910154910731844 0.6900473968920092 5 PQDA 4 -1 33.8 0.0 0.0 2.9976 0.0 0.0 170.06609319278226 543.2865084283811 713.3526016211633 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.805462187404089 PQDA 2.9976 - 96 + 1 2.456 69312.4 0.8799999952316284 1429 3880 5307 SUDHL4_400M_050219_1,5311 SUDHL4_400M_050219_1,5311,AAKVCHCIGL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5313 27.03 800.0 165720.0 25 0 9150.8 -1 NMPTQSLLMYM 11 129 672.8012910810319 1343.5880292288637 2 672.8007079958916 MULTI CID FTMS 0 0 0 5312 140631.4375 1.0 0 0.0 1 Oxidation (M) _NMPTQSLLM(Oxidation (M))YM_ ENSG00000171940|ENST00000371471|ZNF217 18.373094154950223 0.6529654022026722 5 NMPN{I|L}NADQ 9 -1 85.606 0.0 0.0 6.3715 0.0 0.0 0.0 343.1374605768188 343.1374605768188 58.06154967875359 0.0 0.0 0.0 0 0.6747425010840047 1.6989700043360187 0.0 1.274227503252014 NMPN{I|L}NADQ 6.3715 - 1608 + 1 2.442 95972.3 0.7200000286102295 1430 3881 5312 SUDHL4_400M_050219_1,5313 SUDHL4_400M_050219_1,5313,NMPTQSLLMYM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5314 27.044 800.0 255100.0 25 0 21535.0 -1 0 188 422.1231344780699 842.2317160229398 2 422.1229431033134 MULTI CID FTMS 0 0 0 5312 273513.03125 1.0 0 0.0 2 5 P 1 -1 12.474 0.0 0.0 1.4811 0.0 0.0 727.167733944618 0.0 727.167733944618 0.0 2.4742501084004687 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.4811 - 22 + 1 2.442 159115.4 1.0 1431 3881 5312 SUDHL4_400M_050219_1,5314 SUDHL4_400M_050219_1,5314, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5316 27.048 72.0 654060.0 25 0 30792.0 + 2620 ASSPEHPEL 9 83 483.730502657321 965.446452381442 2 483.7297851443291 MULTI CID FTMS 0 0 0 5315 721450.375 0.4225927379193461 5 -0.233346939086914 1 Unmodified _ASSPEHPEL_ ENSG00000068308|ENST00000376488|OTUD5;nc|ENSG00000068308|Q96G74-2|OTUD5;nc|ENSG00000068308|Q96G74-3|OTUD5;nc|ENSG00000068308|Q96G74-4|OTUD5;nc|ENSG00000068308|Q96G74|OTUD5 32.30548876998284 0.1201446275138228 5 {[SA]|[TG]}SPEH[EP]{I|L} 9 0 + 48.266 0.0 0.0 4.9993 4.9993 89.009 0.0 0.0 0.0 31.22659206100714 8.071516336144882 8.071516336144882 13.93417357759219 0 0.5 1.5228787452803376 0.3054621874040891 0.0 + + {[SA]|[TG]}SPEH[EP]{I|L};{[SA]|[TG]}SP{[SA]|[TG]}[KT]A{M(Oxidation (M))|F};{[SA]|[TG]}S{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[TP]{M(Oxidation (M))|F};{[SA]|[TG]}S{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[EC]{I|L};[MN]NR{[RE]|[WV]}{M(Oxidation (M))|F} 4.9993;3.556;3.2163;3.147;0.54564 +;-;-;-;- + 127 + 1 2.442 41653.0 1.0 1432 3882 5315 SUDHL4_400M_050219_1,5316 SUDHL4_400M_050219_1,5316,ASSPEHPEL True True ASSPEHPEL 27.048318 483.729785144329 19745368.0 5315.0 ENSG00000068308|ENST00000376488|OTUD5;;nc|ENSG00000068308|Q96G74-3|OTUD5;;nc|ENSG00000068308|Q96G74|OTUD5;;nc|ENSG00000068308|Q96G74-2|OTUD5;;nc|ENSG00000068308|Q96G74-4|OTUD5 7.995604197184245 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5317 27.062 800.0 68094.0 25 0 16362.0 -1 0 37 1178.4824506850557 3532.425522655368 3 1179.151171863079 MULTI CID FTMS 0 0 0 5315 63629.12109375 0.0754646082050511 7 -0.2949867248535156 2 5 {M(Oxidation (M))|F}{I|L} 2 -1 10.969 0.0 0.0 0.31053 0.0 0.0 2203.781798145405 1065.4986055963502 3269.2804037417554 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L} 0.31053 - 6 + 1 2.442 53612.9 0.7699999809265137 1433 3882 5315 SUDHL4_400M_050219_1,5317 SUDHL4_400M_050219_1,5317, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5318 27.063 36.0 1494000.0 25 0 132050.0 + -1 GVVTDMFTAI 10 88 535.2671910889866 1068.519829244773 2 535.2673217654228 MULTI CID FTMS 0 0 0 5315 1622851.875 0.0778619580111578 -4 0.1243972778320312 3 Oxidation (M) _GVVTDM(Oxidation (M))FTAI_ REV__ENSG00000164659|ENST00000450689|ELAPOR2 39.957323273325 0.1580177220464651 5 QDT[WK]A{I|L} 7 -1 64.53 0.0 0.0 6.0392 0.0 0.0 208.0902770980918 0.0 208.0902770980918 0.0 38.5878778100617 0.0 0.0 0 2.2302046884880937 0.0 0.8494850021680094 0.2887254899964357 QDT[WK]A{I|L} 6.0392 - 223 + 1 2.442 45430.2 1.0 1434 3882 5315 SUDHL4_400M_050219_1,5318 SUDHL4_400M_050219_1,5318,GVVTDMFTAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5319 27.065 77.0 646740.0 25 0 223280.0 51 AAAYATGK 8 70 376.701906141053 751.389259348906 2 376.7006408572197 MULTI CID FTMS 0 0 0 5315 153295.625 0.8791807914591429 1 -0.0350875854492187 4 Unmodified _AAAYATGK_ ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000126464|Q9ULL5-2|PRR12 0.7936320650641473 0.8195151834710337 5 D 1 8 15.485 0.0 0.0 2.0608 0.0 0.0 618.3512935059357 0.0 618.3512935059357 0.0 -2.4742501084004687 -2.4742501084004687 0.0 0 0.0 0.0 0.0 0.0 D 2.0608 - 2 + 1 2.442 43433.5 1.0 1435 3882 5315 SUDHL4_400M_050219_1,5319 SUDHL4_400M_050219_1,5319,AAAYATGK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5320 27.079 800.0 153720.0 25 0 8728.4 + 36830 TELEKKSPS 9 169 509.77505000873 0 509.7767516970634 PEAK CID FTMS 0 0 0 5315 96691.0 1.0 0 0.0 5 Unmodified _TELEKKSPS_ REV__ENSG00000048342|ENST00000424120|CC2D2A;REV__ENST00000513811.5_1_4:15471657-15545375:+|nuORF;REV__ENST00000514450.2_1_4:15471657-15513157:+|nuORF;REV__nc|ENSG00000048342|Q9P2K1-2|CC2D2A 41.8396318013385 0.053988301646488 5 {I|L}E 2 -1 26.013 0.0 0.0 2.5565 0.0 0.0 230.08965432466303 542.2952213210882 772.3848756457512 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.805462187404089 0.0 {I|L}E 2.5565 + + 177 + 1 2.442 94339.7 0.6100000143051147 1436 3882 5315 SUDHL4_400M_050219_1,5320 SUDHL4_400M_050219_1,5320,TELEKKSPS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5322 27.083 49.0 952070.0 25 0 138280.0 + 38983 TVQDLQGEV 9 83 494.75113786294327 987.4877227926866 2 494.7509338259697 MULTI CID FTMS 0 0 0 5321 1251594.25 0.032814823443588 15 -0.4162750244140625 1 Unmodified _TVQDLQGEV_ ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A 30.63653989081413 0.1413794767160703 5 {[TV]|[{I|L}S]}QD 4 5 34.737 0.0 0.0 3.5177 0.0 0.0 0.0 541.2626611073928 541.2626611073928 0.4874446898056419 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3054621874040891 0.2742275032520141 + {[TV]|[{I|L}S]}QD 3.5177 + + 206 1 2.442 43929.4 1.0 1437 3883 5321 SUDHL4_400M_050219_1,5322 SUDHL4_400M_050219_1,5322,TVQDLQGEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5323 27.097 800.0 155620.0 25 0 6440.7 + 13198 HGIDPTGTY 9 161 480.7249464247716 959.4353399163432 2 480.7251769900322 MULTI CID FTMS 0 0 0 5321 87292.109375 0.0215090543008568 16 -0.4479179382324219 2 Unmodified _HGIDPTGTY_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF 67.34385681178166 0.0221257235307089 5 [YT]G[W{I|L}]GTY 8 5 + 41.461 0.0 0.0 4.3214 4.3214 77.2 0.0 0.0 0.0 1.6833438113885606 11.002606389766797 1.6833438113885606 1.6833438113885606 0 0.4247425010840047 0.721246399047171 1.5387254899964358 0.0 [YT]G[W{I|L}]GTY;{[HG]|PP}{I|L}DPTGTY;{[VA]|[{I|L}G]}HDPTGTY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}PTGTY;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}GPTGTY;{[HG]|PP}{I|L}DPGTTY;[TP][HS]PTGTY;{[SA]|[TG]}Y[W{I|L}]GTY;{[CT]|[{M(Oxidation (M))|F}G]}A{M(Oxidation (M))|F}PTGTY;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}NPTTY 4.3214;4.146;3.7789;3.7312;3.5477;3.4946;3.4363;3.4005;3.321;3.318 -;+;-;-;-;-;-;-;-;- + 845 1 2.442 96971.7 0.5400000214576721 1438 3883 5321 SUDHL4_400M_050219_1,5323 SUDHL4_400M_050219_1,5323,HGIDPTGTY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5325 27.103 120.0 482120.0 25 0 35619.0 + 2072 APMSNPHTV 9 85 477.2291156169867 952.4436783007734 2 477.2291442751884 MULTI CID FTMS 0 0 0 5324 387321.3125 0.0842056213997039 15 -0.4296379089355469 1 Unmodified _APMSNPHTV_ REV__ENSG00000068697|ENST00000175091|LAPTM4A 25.399314129420983 0.2080152500878129 5 SPAMP[HN]S{I|L} 9 -1 + 49.993 0.0 0.0 5.2489 5.2489 90.083 0.0 0.0 0.0 39.81160126912803 3.143265708843046 3.143265708843046 15.67339955402202 0 1.5317183090963749 2.0 0.4247425010840047 0.3807196863200844 SPAMP[HN]S{I|L};SP[YG]A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{I|L};SP[YQ]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}S{I|L} 5.2489;3.6033;3.2392 -;-;- 262 + 1 2.422 51750.4 1.0 1439 3884 5324 SUDHL4_400M_050219_1,5325 SUDHL4_400M_050219_1,5325,APMSNPHTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5326 27.107 200.0 624310.0 25 0 44981.0 + 41301 VPHTRPVSL 9 106 503.29580998825855 1004.5770670433172 2 503.2965270876884 MULTI CID FTMS 0 0 0 5324 293731.625 0.0439714874781953 -5 0.1594409942626953 2 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 60.07390631473393 0.0260411565414776 5 VPHTRPVS{I|L} 9 0 + 77.996 0.0 0.0 7.764 7.764 97.677 0.0 0.0 0.0 64.80806210561325 4.878133914613855 4.878133914613855 50.65382488495656 0 0.9802046884880936 2.0 1.3913577739914502 0.0 + + VPHTRPVS{I|L};[VP][RN][NP]{I|L}PV 7.764;2.7217 +;- + 191 + 1 2.422 98047.9 1.0 1440 3884 5324 SUDHL4_400M_050219_1,5326 SUDHL4_400M_050219_1,5326,VPHTRPVSL True True VPHTRPVSL 27.107089 503.296527087688 131008812.0 5324.0 ENST00000412609.5_1_19:40170059-40174276:+|nuORF 7.679142951965332 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5327 27.112 253.0 514290.0 25 0 72787.0 + + -1 RLAHYIDRV 9 116 381.5523953274063 1141.6353565824188 3 381.5524780154228 MULTI CID FTMS 0 0 0 5324 174469.90625 0.5993497479430566 -2 0.0533676147460937 3 Carbamidomethyl (C) _PKRVVC(Carbamidomethyl (C))RDI_ ENSG00000176619|ENST00000325327|LMNB2 7.608950283845883 0.6490595679007971 5 [R{I|L}]AHVYEVR 9 -1 [R{I|L}]AH + + 14.763 -0.23664 -0.049581 1.2932 1.2932 52.596 0.0 0.0 0.0 0.0 4.674716983219902 0.0 0.0 0 0.5 0.0 0.0 0.0 [R{I|L}]AHVYEVR 1.2932 - 73 + 1 2.422 103981.9 1.0 1441 3884 5324 SUDHL4_400M_050219_1,5327 SUDHL4_400M_050219_1,5327,PKRVVCRDI False False RLAHYIDRV 27.111789 381.552478015423 1520582.25 5324.0 ENSG00000176619|ENST00000325327|LMNB2 5.638045787811279 3.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5328 27.116 212.0 237600.0 25 0 40764.0 + 41907 VQFGANKSQY 10 81 571.2854847032821 1140.5564164733642 2 571.2850219607353 MULTI CID FTMS 0 0 0 5324 167522.25 0.9225257051049508 -1 0.018280029296875 4 Unmodified _VQFGANKSQY_ ENSG00000160714|ENST00000292211|UBE2Q1;nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1 19.361941925380144 0.5226674314761524 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}QC 5 6 25.713 0.0 0.0 2.2545 0.0 0.0 0.0 532.2783297174436 532.2783297174436 12.21848749616356 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}QC 2.2545 - 84 + 1 2.422 43437.5 1.0 1442 3884 5324 SUDHL4_400M_050219_1,5328 SUDHL4_400M_050219_1,5328,VQFGANKSQY False True VQFGANKSQY 27.115814 571.285021960735 1476046.0 5324.0 ENSG00000160714|ENST00000292211|UBE2Q1;;nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1 5.333518664042155 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5329 27.123 398.0 181810.0 25 0 10513.0 + 34360 SLTAALHYAV 10 122 523.2877939179499 1044.5610349026997 2 523.2878906130791 MULTI CID FTMS 0 0 0 5324 152144.4375 1.0 0 0.0 5 Unmodified _SLTAALHYAV_ REV__ENSG00000101276|ENST00000645534|SLC52A3;REV__nc|ENSG00000101276|Q9NQ40-2|SLC52A3 24.020572477871973 0.4289996903560794 5 [H{I|L}]E[KS]VYAV 9 -1 + 55.214 0.0 0.0 5.2858 5.2858 82.093 0.0 0.0 0.0 20.152405929883983 14.973024840566469 14.973024840566469 3.0546218740408904 0 0.9076960356474644 1.6989700043360187 0.805462187404089 0.0 [H{I|L}]E[KS]VYAV;[H{I|L}]E[KS]VAYV;[H{I|L}]MRRYAV;[H{I|L}]MRRAYV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}RRYAV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}RRAYV;[H{I|L}]TH{I|L}[Q{I|L}][PS];[H{I|L}]TRR{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[DS]|[MA]|[CV]|TT}[Q{I|L}]{I|L}HYAV;[H{I|L}]TV[KS]{M(Oxidation (M))|F}[{I|L}T] 5.2858;4.9934;4.3951;4.1027;3.3566;3.0641;2.8262;2.6884;2.4442;2.3555 -;-;-;-;-;-;-;-;-;- 774 1 2.422 62484.4 1.0 1443 3884 5324 SUDHL4_400M_050219_1,5329 SUDHL4_400M_050219_1,5329,SLTAALHYAV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5330 27.126 154.0 394480.0 25 0 55140.0 -1 0 92 518.2827553485176 517.2754788819176 1 518.2800170779228 MULTI CID FTMS 0 0 0 5324 225673.21875 0.755528328403396 12 -0.3566570281982422 6 5 Y 1 -1 13.979 0.0 0.0 2.7025 0.0 0.0 336.2009682391426 0.0 336.2009682391426 0.0 3.802112417116064 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.7025 - 13 + 1 2.422 51979.7 1.0 1444 3884 5324 SUDHL4_400M_050219_1,5330 SUDHL4_400M_050219_1,5330, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5331 27.131 260.0 233250.0 25 0 39818.0 + 36400 SYSFGQGA 8 83 408.6803691030445 815.346185272889 2 408.6799804568291 MULTI CID FTMS 0 0 0 5324 154873.703125 1.0 0 0.0 7 Unmodified _SYSFGQGA_ REV__ENSG00000177791|ENST00000359322|MYOZ1 2.577480529830294 0.808687252328423 5 {[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}SER 6 -1 + 55.327 0.0 0.0 6.7857 6.7857 94.826 0.0 0.0 0.0 44.61401446528966 16.387189367729235 16.387189367729235 20.95658962155602 0 0.4247425010840047 2.0 0.0 0.1694451763165201 {[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}SER;{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P;{[YD]|[{M(Oxidation (M))|F}M]}[YN]{[QN]|[E{I|L}]|[KN]} 6.7857;4.2155;2.7169 -;-;- 44 + 1 2.422 50283.0 1.0 1445 3884 5324 SUDHL4_400M_050219_1,5331 SUDHL4_400M_050219_1,5331,SYSFGQGA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5332 27.145 800.0 256390.0 25 0 27744.0 + 45069 YPYGTSTTLY 10 126 583.2727314774834 0 583.2725097537041 PEAK CID FTMS 0 0 0 5324 131041.28125 0.8364975041647126 -2 0.0533676147460937 8 Unmodified _YPYGTSTTLY_ REV__ENSG00000152430|ENST00000392296|BOLL;REV__nc|ENSG00000152430|Q8N9W6-2|BOLL;REV__nc|ENSG00000152430|Q8N9W6-3|BOLL;REV__nc|ENSG00000152430|Q8N9W6-4|BOLL;REV__nc|ENSG00000152430|Q8N9W6-5|BOLL 3.944395688203298 0.3961065659209837 5 TNG 3 -1 16.198 0.0 0.0 1.3909 0.0 0.0 310.06992476961665 579.3156832330686 889.3856080026853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 TNG 1.3909 - 13 + 1 2.422 156303.9 0.6600000262260437 1446 3884 5324 SUDHL4_400M_050219_1,5332 SUDHL4_400M_050219_1,5332,YPYGTSTTLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5333 27.148 194.0 249390.0 25 0 17026.0 + 1695 ALPKEDPTAV 10 105 520.7849028981092 1039.5552528630185 2 520.7848388552666 MULTI CID FTMS 0 0 0 5324 130867.4140625 0.7403435955594488 2 -0.1307086944580078 9 Unmodified _ALPKEDPTAV_ ENSG00000181789|ENST00000314797|COPG1 13.90604991867851 0.6142120002215601 5 V 1 9 13.099 0.0 0.0 1.2601 0.0 0.0 922.475897554716 0.0 922.475897554716 0.0 -3.0153844027245924 -3.0153844027245924 0.0 0 0.0 0.0 0.0 0.0 + V 1.2601 + + 74 + 1 2.422 43483.6 1.0 1447 3884 5324 SUDHL4_400M_050219_1,5333 SUDHL4_400M_050219_1,5333,ALPKEDPTAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5334 27.162 800.0 197530.0 25 0 12542.0 -1 MNPVFTCDVFK 11 125 679.3170965938341 1356.619640254468 2 679.8181640505791 MULTI CID FTMS 0 0 0 5324 123597.5859375 0.443748888558534 -2 0.0533676147460937 10 Carbamidomethyl (C) _MNPVFTC(Carbamidomethyl (C))DVFK_ ENST00000510241.5_2_5:139943603-139943852:-|nuORF 15.248480904072842 0.7179608125786238 5 NMPN{I|L}NEAQ 9 -1 111.51 0.0 0.0 8.2196 0.0 0.0 0.0 342.15327774933496 342.15327774933496 61.35676378874315 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.3252574989159953 2.2104093769761874 NMPN{I|L}NEAQ 8.2196 - 3203 + 1 2.422 116616.6 0.6399999856948853 1448 3884 5324 SUDHL4_400M_050219_1,5334 SUDHL4_400M_050219_1,5334,MNPVFTCDVFK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5336 27.178 800.0 128880.0 25 0 31345.0 -1 0 58 1091.7860280257842 3272.3362546775525 3 1092.119189441204 MULTI CID FTMS 0 0 0 5335 170397.4375 1.0 0 0.0 1 5 C(Carbamidomethyl (C)){M(Oxidation (M))|F}Y[DC]{M(Oxidation (M))|F}G 7 -1 18.716 0.0 0.0 0.57195 0.0 0.0 1021.3606634326272 1355.6359755566298 2376.996638989257 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){M(Oxidation (M))|F}Y[DC]{M(Oxidation (M))|F}G 0.57195 - 61 + 1 2.422 85843.9 0.4399999976158142 1449 3885 5335 SUDHL4_400M_050219_1,5336 SUDHL4_400M_050219_1,5336, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5337 27.181 158.0 437750.0 25 0 56837.0 + 42806 VVKPPGSSL 9 86 442.2659579004773 882.5173628677545 2 442.2659789919853 MULTI CID FTMS 0 0 0 5335 329445.5 0.2686991951148196 -3 0.1183853149414062 2 Unmodified _VVKPPGSSL_ ENSG00000163930|ENST00000460680|BAP1 26.88365393820708 0.1891292719743517 5 VVKD 4 6 40.005 0.0 0.0 4.5331 0.0 0.0 0.0 438.2323328529323 438.2323328529323 26.025684359364405 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 VVKD 4.5331 - 62 + 1 2.422 61968.0 1.0 1450 3885 5335 SUDHL4_400M_050219_1,5337 SUDHL4_400M_050219_1,5337,VVKPPGSSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5338 27.185 198.0 387630.0 25 0 61503.0 + + 8887 FAEAGRSTL 9 89 476.24830045801616 950.4820479828325 2 476.2485229372978 MULTI CID FTMS 0 0 0 5335 229819.53125 0.8845278985804447 -1 0.0650177001953125 3 Unmodified _FAELEVLM_ nc|ENSG00000140451|Q9H611-2|PIF1;nc|ENSG00000140451|Q9H611-3|PIF1;ENST00000560444.1_1_15:65114569-65116540:-|nuORF;ENST00000560504.1_1_15:65115949-65116540:-|nuORF;nc|ENSG00000140451|Q9H611-4|PIF1;ENSG00000140451|ENST00000559239|PIF1 24.67388899826682 0.525179942228231 5 ANNGKEAE 8 -1 51.631 0.0 0.0 5.4321 0.0 0.0 119.07407576728671 0.0 119.07407576728671 0.0 25.68881289407813 0.0 0.0 0 1.6237125054200234 0.0 0.4247425010840047 0.0 ANNGKEAE 5.4321 - 223 1 2.422 63311.6 1.0 1451 3885 5335 SUDHL4_400M_050219_1,5338 SUDHL4_400M_050219_1,5338,FAELEVLM False False FAEAGRSTL 27.185226 476.248522937298 1366941.625 5335.0 nc|ENSG00000140451|Q9H611-2|PIF1;;nc|ENSG00000140451|Q9H611-3|PIF1;;ENST00000560444.1_1_15:65114569-65116540:-|nuORF;;ENST00000560504.1_1_15:65115949-65116540:-|nuORF;;nc|ENSG00000140451|Q9H611-4|PIF1;;ENSG00000140451|ENST00000559239|PIF1 3.368910074234009 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5339 27.193 461.0 382140.0 25 0 86816.0 + -1 STWLRMSMNM 10 102 644.7749257378397 1287.5352985424793 2 644.7750121951103 MULTI CID FTMS 0 0 0 5335 236890.0625 1.0 0 0.0 4 2 Oxidation (M) _STWLRM(Oxidation (M))SM(Oxidation (M))NM_ REV__ENST00000278193.6_1_11:27523061-27523109:-|nuORF 4.897010918128616 0.7039849508293987 5 [MN]{[WT]|[RM]}AN{I|L}DP 9 -1 21.653 0.0 0.0 1.6817 0.0 0.0 0.0 242.0280800997072 242.0280800997072 5.789266744899495 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 [MN]{[WT]|[RM]}AN{I|L}DP 1.6817 - 382 1 2.422 131910.4 1.0 1452 3885 5335 SUDHL4_400M_050219_1,5339 SUDHL4_400M_050219_1,5339,STWLRMSMNM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5340 27.201 436.0 223950.0 25 0 24325.0 + + 36945 AVRDHNVEF 9 111 543.7693927647933 1085.5242325963866 2 543.7682372927666 MULTI CID FTMS 0 0 0 5335 124310.3828125 1.0 0 0.0 5 Unmodified _TEVVDTYLF_ nc|ENSG00000082515|Q9NWU5-3|MRPL22;ENSG00000082515|ENST00000523037|MRPL22;nc|ENSG00000082515|Q9NWU5-2|MRPL22 16.942295170755138 0.3780752226737986 5 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}HNVE{M(Oxidation (M))|F} 9 -1 + 40.111 0.0 0.0 3.6951 3.6951 74.525 0.0 0.0 0.0 0.7770996129254826 4.018637558036666 0.7770996129254826 0.7770996129254826 0 0.4247425010840047 1.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}HNVE{M(Oxidation (M))|F};{M(Oxidation (M))|F}{M(Oxidation (M))|F}VNH[Y{I|L}]{M(Oxidation (M))|F};[EP][KS]HNVE{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}HNV{M(Oxidation (M))|F}E;{[QN]|[E{I|L}]|[KN]}[QA]HNVE{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[RD]HNVE{M(Oxidation (M))|F};[EP][KS]HNV{M(Oxidation (M))|F}E;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}HGGVE{M(Oxidation (M))|F};{M(Oxidation (M))|F}{M(Oxidation (M))|F}VN[Q{I|L}][TA]{M(Oxidation (M))|F};{[CP]|[EA]}[Q{I|L}]HNVE{M(Oxidation (M))|F} 3.6951;3.6235;3.3695;3.3249;3.1405;3.1248;2.9993;2.8468;2.7913;2.7739 -;-;-;-;-;-;-;-;-;- 540 1 2.422 79473.4 1.0 1453 3885 5335 SUDHL4_400M_050219_1,5340 SUDHL4_400M_050219_1,5340,TEVVDTYLF False False AVRDHNVEF 27.20118 543.768237292767 655605.625 5335.0 nc|ENSG00000082515|Q9NWU5-3|MRPL22;;ENSG00000082515|ENST00000523037|MRPL22;;nc|ENSG00000082515|Q9NWU5-2|MRPL22 4.030466079711914 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5341 27.211 572.0 161120.0 25 0 15796.0 + 12030 GQAGMHATYY 10 130 549.739726116049 1097.464899298898 2 549.7386962771416 MULTI CID FTMS 0 0 0 5335 82077.6640625 0.8206695688921836 -1 0.0650177001953125 6 Unmodified _GQAGMHATYY_ ENSG00000130204|ENST00000426677|TOMM40;nc|ENSG00000130204|O96008-2|TOMM40 29.081581746732265 0.3152867722954398 5 {[YC]|[HE]}CKYAT 7 8 42.273 0.0 0.0 3.8518 0.0 0.0 0.0 262.0685729651668 262.0685729651668 8.595977735878037 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.079689690656103 0.3807196863200844 {[YC]|[HE]}CKYAT 3.8518 - 815 1 2.422 75198.6 1.0 1454 3885 5335 SUDHL4_400M_050219_1,5341 SUDHL4_400M_050219_1,5341,GQAGMHATYY False True GQAGMHATYY 27.211211 549.738696277142 591973.3125 5335.0 ENSG00000130204|ENST00000426677|TOMM40;;nc|ENSG00000130204|O96008-2|TOMM40 3.6042677561442056 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5342 27.214 142.0 691920.0 25 0 133540.0 19628 LGEIDESSEL 10 101 546.2573871237864 1090.5002213143728 2 546.2556640505791 MULTI CID FTMS 0 0 0 5335 170604.90625 0.4206071385592246 -1 0.0650177001953125 7 Unmodified _LGEIDESSEL_ ENSG00000065243|ENST00000370521|PKN2;ENST00000316005.11_1_1:89271592-89271736:+|nuORF;nc|ENSG00000065243|Q16513-2|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;nc|ENSG00000065243|Q16513-4|PKN2;nc|ENSG00000065243|Q16513-5|PKN2 14.838274106304384 0.5985701837916485 5 {[QC]|[C(Carbamidomethyl (C))A]}PPHHYP{I|L} 9 9 + 19.631 0.0 0.0 1.8002 1.8002 81.591 0.0 0.0 0.0 6.86694728074653 4.9384195194714025 4.9384195194714025 9.507819773298184 0 0.0 0.0 0.0 0.0 {[QC]|[C(Carbamidomethyl (C))A]}PPHHYP{I|L};[TP]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RN][Y{M(Oxidation (M))|F}];{[QC]|[C(Carbamidomethyl (C))A]}P{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}P{I|L};{[QC]|[C(Carbamidomethyl (C))A]}[WQ][PG]YP{I|L} 1.8002;0.92832;0.70545;0.35679 -;-;-;- 182 + 1 2.422 78089.9 1.0 1455 3885 5335 SUDHL4_400M_050219_1,5342 SUDHL4_400M_050219_1,5342,LGEIDESSEL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5343 27.228 800.0 164770.0 25 0 67976.0 -1 0 39 1189.1481289046462 3564.422557314139 3 1189.476489245892 MULTI CID FTMS 0 0 0 5335 99604.171875 0.8759755785863282 -1 0.0650177001953125 8 5 W 1 -1 6.9897 0.0 0.0 0.1961 0.0 0.0 2741.3137449135515 634.0009859674436 3375.314730880996 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.1961 - 1 + 1 2.422 92176.2 0.4099999964237213 1456 3885 5335 SUDHL4_400M_050219_1,5343 SUDHL4_400M_050219_1,5343, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5345 27.245 800.0 129640.0 25 0 8714.2 -1 RAWDMRYYMNQ 11 105 775.3372783899891 1548.6600038467782 2 775.3375121951103 MULTI CID FTMS 0 0 0 5344 127363.3125 0.0230046043233298 15 -0.3334693908691406 1 Oxidation (M) _RAWDMRYYM(Oxidation (M))NQ_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF;ENST00000591149.5_1_19:2807001-2808381:+|nuORF 4.897010918128616 0.8520435188433833 5 {[QD]|[EN]|[WG]|[KD]|[RS]}GT{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F}YQ 13 -1 + 90.584 0.0 0.0 5.8492 5.8492 81.094 0.0 0.0 0.0 5.277072620449374 54.32831027470793 5.277072620449374 1.1136592941902563 0 1.3494850021680094 0.0 1.4674165578762486 1.274227503252014 {[QD]|[EN]|[WG]|[KD]|[RS]}GT{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}GT{[{M(Oxidation (M))|F}C]|[YS]}GAQNA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AS{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}GT{[{M(Oxidation (M))|F}C]|[YS]}QNQA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}TG{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AS{[{M(Oxidation (M))|F}C]|[YS]}GAQNA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}GT{[{M(Oxidation (M))|F}C]|[YS]}GANQA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}TG{[{M(Oxidation (M))|F}C]|[YS]}GAQNA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}GT{[{M(Oxidation (M))|F}C]|[YS]}Q[AG]NA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}GT{[{M(Oxidation (M))|F}C]|[YS]}QQGGA{M(Oxidation (M))|F}YQ 5.8492;5.7773;5.4464;5.4448;5.3759;5.3745;5.3729;5.304;5.2634;5.2634 -;-;-;-;-;-;-;-;-;- 12443 1 2.402 75735.5 0.75 1457 3886 5344 SUDHL4_400M_050219_1,5345 SUDHL4_400M_050219_1,5345,RAWDMRYYMNQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5346 27.248 105.0 627370.0 25 0 40347.0 38149 TPPAPCLPSPI 11 85 364.8633980329992 1091.5683646991977 3 364.8633300662041 MULTI CID FTMS 0 0 0 5344 562047.75 0.2315767885829981 -6 0.257913589477539 2 Unmodified _TPPAPCLPSPI_ ENSG00000215182|ENST00000621226|MUC5AC 27.628801355627647 0.4434699450731472 5 TP 2 9 29.297 0.0 0.0 2.6839 0.0 0.0 0.0 890.4488619440061 890.4488619440061 1.1766816466656105 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 + TP 2.6839 + + 182 + 1 2.402 67164.0 1.0 1458 3886 5344 SUDHL4_400M_050219_1,5346 SUDHL4_400M_050219_1,5346,TPPAPCLPSPI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5347 27.25 88.0 775350.0 25 0 64771.0 38099 TPLAGFGYGLP 11 100 546.7915683327644 1091.5685837323288 2 546.7915527224541 MULTI CID FTMS 0 0 0 5344 439067.3125 0.2170271553757763 -5 0.2152309417724609 3 Unmodified _TPLAGFGYGLP_ ENSG00000005882|ENST00000503176|PDK2;ENST00000512204.5_1_17:48185497-48187458:+|nuORF;nc|ENSG00000005882|Q15119-2|PDK2 19.256988751693697 0.6345794173041263 5 TPMK{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}P 9 5 + 51.213 0.0 0.0 4.6917 4.6917 79.646 0.0 0.0 0.0 30.46368052030376 2.6884531229258 2.6884531229258 2.6884531229258 0 1.1861818737241734 1.6989700043360187 0.0 0.0 TPMK{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}P;TPMK{[QD]|[EN]|[WG]|[KD]|[RS]}YP{I|L};TP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}P;TP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QV]|[N{I|L}]|[RA]|[KV]}YP{I|L};{NN|[MP]|[D{I|L}]|[EV]}KT[HA]PT{I|L}P;[PG][EP]{[RE]|[WV]}PT{I|L}P 4.6917;4.4454;3.6557;3.4094;1.4307;1.2746 -;-;-;-;-;- 509 + 1 2.402 58023.4 1.0 1459 3886 5344 SUDHL4_400M_050219_1,5347 SUDHL4_400M_050219_1,5347,TPLAGFGYGLP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5348 27.263 800.0 247390.0 25 0 25866.0 + -1 EGIYPCCTY 9 175 581.7307219838027 1161.446891034405 2 581.7307617068291 MULTI CID FTMS 0 0 0 5344 273721.5625 0.5919615568881781 -3 0.1489887237548828 4 2 Carbamidomethyl (C) _EGIYPC(Carbamidomethyl (C))C(Carbamidomethyl (C))TY_ REV__ENSG00000140326|ENST00000356231|CDAN1;REV__nc|ENSG00000140326|Q8IWY9-1|CDAN1 28.486842064014134 0.1687311288560894 5 QT{I|L}VKMTY 8 -1 46.604 0.0 0.0 4.0126 0.0 0.0 178.92932619241157 0.0 178.92932619241157 0.0 18.91805208745864 0.0 0.0 0 0.6747425010840047 0.0 0.6861818737241735 0.0 QT{I|L}VKMTY 4.0126 - 1312 + 1 2.402 146421.2 0.9399999976158142 1460 3886 5344 SUDHL4_400M_050219_1,5348 SUDHL4_400M_050219_1,5348,EGIYPCCTY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5349 27.277 800.0 153610.0 25 0 11882.0 + -1 IHCYARQCYYQ 11 92 781.3374308657778 1560.6603087983556 2 781.3383666872978 MULTI CID FTMS 0 0 0 5344 154418.765625 0.8897715357767746 -3 0.1489887237548828 5 2 Carbamidomethyl (C) _IHC(Carbamidomethyl (C))YARQC(Carbamidomethyl (C))YYQ_ REV__ENSG00000165416|ENST00000310528|SUGT1;REV__ENST00000607588.1_1_13:52743381-52745380:-|nuORF;REV__nc|ENSG00000165416|Q9Y2Z0|SUGT1 17.11289562659939 0.6791789249425932 5 [NP]HDEAQQNA{M(Oxidation (M))|F}YQ 13 -1 + 112.13 0.0 0.0 7.1851 7.1851 90.386 0.0 0.0 0.0 4.503280781317258 97.09731227001984 4.503280781317258 6.989700043360188 0 1.424742501084005 0.0 1.0189301784845295 1.274227503252014 [NP]HDEAQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}YK;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQNA{M(Oxidation (M))|F}YK;[NP]HDEAQQGGA{M(Oxidation (M))|F}YQ;[NP]HDEAQ[AG]NA{M(Oxidation (M))|F}YQ;[NP]HDEA[AG]QNA{M(Oxidation (M))|F}YK;[YE][NG]EAQQNA{M(Oxidation (M))|F}YK;{[NV]|[RG]}{[{M(Oxidation (M))|F}C]|[YS]}EAQQNA{M(Oxidation (M))|F}YQ;[HD][NP]EAQQNA{M(Oxidation (M))|F}YK;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}YK 7.1851;6.7372;6.7044;6.6037;6.6037;6.6037;6.4494;6.3073;6.2566;6.1559 -;-;-;-;-;-;-;-;-;- 2786 1 2.402 87524.4 0.6800000071525574 1461 3886 5344 SUDHL4_400M_050219_1,5349 SUDHL4_400M_050219_1,5349,IHCYARQCYYQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5351 27.282 125.0 373640.0 25 0 26829.0 + 36961 TFDDLTEDPTF 11 81 650.7815569793606 1299.5485610255212 2 650.7814819216728 MULTI CID FTMS 0 0 0 5350 292892.78125 0.1799597561297806 3 -0.0834636688232421 1 Unmodified _TFDDLTEDPTF_ REV__ENSG00000188130|ENST00000215659|MAPK12;REV__ENST00000482969.5_1_22:50695071-50699655:-|nuORF;REV__ENST00000488504.5_1_22:50695267-50699938:-|nuORF;REV__ENST00000492218.1_1_22:50696079-50699281:-|nuORF;REV__ENST00000497036.5_1_22:50691832-50699551:-|nuORF;REV__nc|ENSG00000188130|P53778-2|MAPK12 8.745405648335112 0.8338865417133445 5 DEAQQNA{M(Oxidation (M))|F} 8 -1 78.124 0.0 0.0 6.0116 0.0 0.0 378.1661854474625 0.0 378.1661854474625 0.0 48.36941925122965 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.4247425010840047 DEAQQNA{M(Oxidation (M))|F} 6.0116 - 1014 1 2.402 42870.1 1.0 1462 3887 5350 SUDHL4_400M_050219_1,5351 SUDHL4_400M_050219_1,5351,TFDDLTEDPTF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5352 27.29 461.0 271190.0 25 0 32352.0 -1 HAIPPTLAM 9 142 483.75681452216304 965.499076111126 2 483.7572204470634 MULTI CID FTMS 0 0 0 5350 61005.33203125 0.5469196121552625 10 -0.1806545257568359 2 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 24.67388899826682 0.2172451872415813 5 {[HG]|PP}T{I|L}AH{I|L}A{M(Oxidation (M))|F} 9 -1 {[HG]|PP}T{I|L}AH{I|L} + + 24.464 -1.681 -0.23046 2.5338 2.5338 53.467 0.0 0.0 0.0 0.0 11.699740308471752 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {[HG]|PP}T{I|L}AH{I|L}A{M(Oxidation (M))|F} 2.5338 - 218 + 1 2.402 101035.9 1.0 1463 3887 5350 SUDHL4_400M_050219_1,5352 SUDHL4_400M_050219_1,5352,HAIPPTLAM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5353 27.293 165.0 366350.0 25 0 56761.0 + 30985 RLDDVSNDV 9 87 516.7515810699666 1031.4886092067331 2 516.7513915896416 MULTI CID FTMS 0 0 0 5350 168286.484375 0.3182409381864719 -3 0.1799793243408203 3 Unmodified _RLDDVSNDV_ ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5 27.22323531849824 0.1848086127304535 5 [R{I|L}]DDVSNDV 9 0 + 54.659 0.0 0.0 5.299 5.299 87.997 0.0 0.0 0.0 3.4678748622465605 26.72675956532529 3.4678748622465605 9.208187539523747 0 0.8807196863200843 0.0 0.4247425010840047 0.0 + + [R{I|L}]DDVSNDV;[R{I|L}]DDVSGGDV;[R{I|L}]DM{[{M(Oxidation (M))|F}H]|[RQ]}DV;[R{I|L}]{[ET]|[MV]}{[DA]|[EG]}NDV;[NS][WK]{[{M(Oxidation (M))|F}H]|[RQ]}DV;[R{I|L}]D[WP][C(Carbamidomethyl (C))S]V 5.299;4.4063;2.8283;2.4449;1.886;0.72249 +;-;-;-;-;- + 147 1 2.402 51880.0 1.0 1464 3887 5350 SUDHL4_400M_050219_1,5353 SUDHL4_400M_050219_1,5353,RLDDVSNDV False True RLDDVSNDV 27.293421 516.751391589642 2113374.75 5350.0 nc|ENSG00000164818|Q86Y56-3|DNAAF5;;nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENSG00000164818|ENST00000297440|DNAAF5 6.1863203048706055 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5354 27.297 182.0 312880.0 25 0 27228.0 + 14171 IDEWRDLD 8 85 531.2472099792116 1060.479867025223 2 531.2484619021416 MULTI CID FTMS 0 0 0 5350 120288.1171875 0.4584553746744604 -2 0.1149616241455078 4 Unmodified _IDEWRDLD_ REV__ENSG00000185915|ENST00000379499|KLHL34 20.453626601364224 0.6087503291685402 5 {NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}C[PA]D{I|L}D 10 -1 + 27.598 0.0 0.0 2.6024 2.6024 74.666 0.0 0.0 0.0 7.860527937172606 7.134928107446186 7.134928107446186 2.430380486862944 0 0.6237125054200234 2.0 0.0 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}C[PA]D{I|L}D;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}G[DV]D{I|L}D;{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}C[PA]D{I|L}D;{[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}G[DV]D{I|L}D;[{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}H]|[RQ]}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}D;[KQ]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[DA]|[EG]}D{I|L}D 2.6024;2.3732;1.4502;1.221;0.86624;0.43902 -;-;-;-;-;- 306 1 2.402 46697.5 1.0 1465 3887 5350 SUDHL4_400M_050219_1,5354 SUDHL4_400M_050219_1,5354,IDEWRDLD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5355 27.303 357.0 215020.0 25 0 21568.0 14183 IDGYYGNP 8 119 449.6990508707187 897.3835488082374 2 449.6993591189384 MULTI CID FTMS 0 0 0 5350 97894.1875 0.4443067407637912 -6 0.2645015716552734 5 Unmodified _IDGYYGNP_ ENSG00000091128|ENST00000388781|LAMB4;ENST00000475469.1_1_7:107703197-107763609:-|nuORF;nc|ENSG00000091128|A4D0S4-3|LAMB4 16.942295170755138 0.6606234159769251 5 {[TV]|[{I|L}S]}P 3 6 15.406 0.0 0.0 1.7168 0.0 0.0 0.0 597.1908071761703 597.1908071761703 -1.1092437480817772 0.0 -1.1092437480817772 0.0 0 0.0 0.494850021680094 0.0 0.0 {[TV]|[{I|L}S]}P 1.7168 - 151 1 2.402 62195.7 1.0 1466 3887 5350 SUDHL4_400M_050219_1,5355 SUDHL4_400M_050219_1,5355,IDGYYGNP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5356 27.313 523.0 205570.0 25 0 14369.0 + -1 LGSTSYDCGY 10 133 561.7239626515812 1121.4333723699624 2 561.7234985232353 MULTI CID FTMS 0 0 0 5350 131737.375 1.0 0 0.0 6 Carbamidomethyl (C) _LGSTSYDC(Carbamidomethyl (C))GY_ REV__ENSG00000146802|ENST00000312814|TMEM168;REV__nc|ENSG00000146802|Q9H0V1-2|TMEM168 3.944395688203298 0.708391353636983 5 Y 1 -1 11.109 0.0 0.0 0.99063 0.0 0.0 940.359014315078 0.0 940.359014315078 0.0 2.6995604228955905 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.99063 + + 44 + 1 2.402 84673.4 1.0 1467 3887 5350 SUDHL4_400M_050219_1,5356 SUDHL4_400M_050219_1,5356,LGSTSYDCGY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5357 27.326 800.0 97131.0 25 0 6735.4 + -1 AGNAYWCERM 10 102 629.2602683339285 1256.5059837346569 2 629.2595092654228 MULTI CID FTMS 0 0 0 5350 101777.1484375 1.0 0 0.0 7 Carbamidomethyl (C) _AGNAYWC(Carbamidomethyl (C))ERM_ REV__ENSG00000106799|ENST00000374994|TGFBR1;REV__ENSG00000123612|ENST00000243349|ACVR1C;REV__ENSG00000135503|ENST00000257963|ACVR1B;REV__nc|ENSG00000106799|P36897-2|TGFBR1;REV__nc|ENSG00000106799|P36897-3|TGFBR1;REV__nc|ENSG00000123612|Q8NER5-2|ACVR1C;REV__nc|ENSG00000123612|Q8NER5-3|ACVR1C;REV__nc|ENSG00000123612|Q8NER5-4|ACVR1C;REV__nc|ENSG00000135503|P36896-4|ACVR1B;REV__nc|ENSG00000135503|P36896-5|ACVR1B 10.823927491677226 0.6659270209832991 5 NEAQQNA{M(Oxidation (M))|F} 8 -1 63.569 0.0 0.0 5.0592 0.0 0.0 336.1066151349625 0.0 336.1066151349625 0.0 42.48178509015325 0.0 0.0 0 0.8494850021680094 0.0 0.2742275032520141 0.6861818737241735 NEAQQNA{M(Oxidation (M))|F} 5.0592 - 433 1 2.402 64820.9 0.6000000238418579 1468 3887 5350 SUDHL4_400M_050219_1,5357 SUDHL4_400M_050219_1,5357,AGNAYWCERM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5359 27.331 3.9 9050800.0 25 0 777060.0 1164 AHDEVAPFAL 10 60 535.2671910889866 1068.519829244773 2 535.2678100466728 MULTI CID FTMS 0 0 0 5358 14312301.0 0.686682374819361 2 -0.0341873168945312 1 Unmodified _AHDEVAPFAL_ ENST00000443339.5_1_3:9471730-9475758:+|nuORF 20.453626601364224 0.5043500229302764 5 QDT[WK]A{I|L} 7 7 58.443 0.0 0.0 5.4695 0.0 0.0 208.08569946137305 0.0 208.08569946137305 0.0 50.99541889442877 0.0 0.0 0 2.0 0.0 0.805462187404089 0.2887254899964357 QDT[WK]A{I|L} 5.4695 - 82 + 1 2.387 33847.9 1.0 1469 3888 5358 SUDHL4_400M_050219_1,5359 SUDHL4_400M_050219_1,5359,AHDEVAPFAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5360 27.336 288.0 246490.0 25 0 28302.0 + 44349 YLQKETSTL 9 93 541.7903741983921 1081.566195463584 2 541.7900878787041 MULTI CID FTMS 0 0 0 5358 293367.5 0.7707986928273082 -4 0.2292556762695312 2 Unmodified _YLQKETSTL_ ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-5|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4 63.960520009940105 0.0238892913700936 5 [Y{I|L}]QH[{M(Oxidation (M))|F}V]Y{I|L} 8 5 + 64.319 0.0 0.0 5.9468 5.9468 91.42 0.0 0.0 0.0 20.43128452330365 3.2834093268442643 3.2834093268442643 12.149392758355177 0 1.3807196863200843 2.0 0.0 0.2887254899964357 [Y{I|L}]QH[{M(Oxidation (M))|F}V]Y{I|L};[Y{I|L}][AG]H[{M(Oxidation (M))|F}V]Y{I|L};[Y{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}PT{I|L};[Y{I|L}]{[{M(Oxidation (M))|F}D]|MM}T{I|L}PT{I|L};[KQ]ETST{I|L}Y{I|L};[Y{I|L}][HK][{M(Oxidation (M))|F}V]Y{I|L};[Y{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}RH{I|L};{[MG]|[TS]}{I|L}{[QG]|[NA]}ST{I|L}Y{I|L};[KQ]ET[Y{I|L}]ST{I|L};[KQ]ER[{M(Oxidation (M))|F}V]Y{I|L} 5.9468;4.8235;4.6095;4.428;4.0578;3.7509;3.6773;3.1068;3.0103;3.0048 -;-;-;-;-;-;-;-;-;- 749 1 2.387 56689.7 1.0 1470 3888 5358 SUDHL4_400M_050219_1,5360 SUDHL4_400M_050219_1,5360,YLQKETSTL True True YLQKETSTL 27.336237 541.790087878704 1777369.0 5358.0 nc|ENSG00000161813|Q71RC2-4|LARP4;;nc|ENSG00000161813|Q71RC2-3|LARP4;;nc|ENSG00000161813|Q71RC2-2|LARP4;;nc|ENSG00000161813|Q71RC2-5|LARP4;;nc|ENSG00000161813|Q71RC2-7|LARP4;;ENSG00000161813|ENST00000398473|LARP4 4.38282044728597 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5361 27.339 122.0 431660.0 25 0 70015.0 10869 GAEVELSAPV 10 85 486.255198508216 970.495844083232 2 486.2534057497978 MULTI CID FTMS 0 0 0 5358 315693.84375 0.2872185644432495 -20 0.5711650848388672 3 Unmodified _GAEVELSAPV_ ENSG00000169169|ENST00000598293|CPT1C;ENST00000295404.9_1_19:50194996-50204826:+|nuORF;ENST00000599023.5_1_19:50195509-50213852:+|nuORF;ENST00000600944.5_1_19:50195509-50200723:+|nuORF;nc|ENSG00000169169|Q8TCG5-2|CPT1C;nc|ENSG00000169169|Q8TCG5-3|CPT1C 20.453626601364224 0.5043500229302764 5 [{I|L}T][RD]D 5 9 34.093 0.0 0.0 3.5129 0.0 0.0 0.0 367.1970614068969 367.1970614068969 20.597718523607966 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.0 [{I|L}T][RD]D 3.5129 - 154 + 1 2.387 48685.9 1.0 1471 3888 5358 SUDHL4_400M_050219_1,5361 SUDHL4_400M_050219_1,5361,GAEVELSAPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5363 27.344 120.0 302140.0 25 0 28040.0 + 38984 TVQDLQGEV 9 76 494.75113786294327 987.4877227926866 2 494.7510558962822 MULTI CID FTMS 0 0 0 5362 245663.828125 0.0064409173711031 21 -0.47711181640625 1 Unmodified _TVQDLQGEV_ ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A 24.020572477871973 0.2255576514309169 5 {[TV]|[{I|L}S]}DQ 4 5 36.682 0.0 0.0 3.7147 0.0 0.0 0.0 541.2626305898146 541.2626305898146 12.939396831462616 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[TV]|[{I|L}S]}DQ 3.7147 - 165 1 2.387 38860.0 1.0 1472 3889 5362 SUDHL4_400M_050219_1,5363 SUDHL4_400M_050219_1,5363,TVQDLQGEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5364 27.346 111.0 398670.0 25 0 21940.0 + 26610 NVPWTRTI 8 89 493.7723442399525 985.5301355467052 2 493.7725707888603 MULTI CID FTMS 0 0 0 5362 331981.21875 0.6665080399884785 -2 0.0616397857666015 2 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 21.74664581756881 0.5868176546531598 5 {[TV]|[{I|L}S]}QGV 5 -1 29.693 0.0 0.0 3.0129 0.0 0.0 0.0 498.2511187832864 498.2511187832864 1.413872233100971 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}QGV 3.0129 - 547 1 2.387 37449.9 1.0 1473 3889 5362 SUDHL4_400M_050219_1,5364 SUDHL4_400M_050219_1,5364,NVPWTRTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5365 27.356 559.0 140410.0 25 0 9167.0 + 17058 KLAGDHIEY 9 130 523.268590433844 1044.522627934488 2 523.2684203982353 MULTI CID FTMS 0 0 0 5362 116122.3515625 1.0 0 0.0 3 Unmodified _KLAGDHIEY_ ENSG00000155463|ENST00000612549|OXA1L;ENST00000481218.1_1_14:23236498-23239613:+|nuORF;ENST00000495424.5_1_14:23235916-23239613:+|nuORF;nc|ENSG00000155463|Q15070-2|OXA1L;nc|ENSG00000155463|Q15070-3|OXA1L 51.629811660486645 0.0367964933207742 5 {[QN]|[E{I|L}]|[KN]}[HN]K{I|L}EY 8 5 + 56.718 0.0 0.0 5.43 5.43 89.986 0.0 0.0 0.0 10.985994592184554 28.61412409494479 10.985994592184554 11.518637558036673 0 0.6989700043360187 1.154901959985743 0.3494850021680094 0.7059771852360797 {[QN]|[E{I|L}]|[KN]}[HN]K{I|L}EY;{[QN]|[E{I|L}]|[KN]}[HN]{I|L}KEY;[{I|L}T][HN]R{I|L}EY;{[{M(Oxidation (M))|F}C]|[YS]}[KS]R{I|L}EY;[{I|L}T][RN]H{I|L}EY;{[DS]|[MA]|[CV]|TT}[YQ]K{I|L}EY;[{I|L}T][HN]GV{I|L}EY;{[{M(Oxidation (M))|F}C]|[YS]}[KS]GV{I|L}EY;{[QN]|[E{I|L}]|[KN]}[QA][RH]EY;{[QN]|[E{I|L}]|[KN]}[HN]E[K{I|L}]Y 5.43;4.3273;3.9761;3.8035;3.705;3.6552;3.3941;3.2214;3.1575;2.7264 -;-;-;-;-;-;-;-;-;- 295 1 2.387 65413.2 1.0 1474 3889 5362 SUDHL4_400M_050219_1,5365 SUDHL4_400M_050219_1,5365,KLAGDHIEY True True KLAGDHIEY 27.355785 523.268420398235 439118.59375 5362.0 nc|ENSG00000155463|Q15070-2|OXA1L;;nc|ENSG00000155463|Q15070-3|OXA1L;;ENST00000495424.5_1_14:23235916-23239613:+|nuORF;;ENST00000481218.1_1_14:23236498-23239613:+|nuORF;;ENSG00000155463|ENST00000612549|OXA1L 4.237911542256673 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5366 27.361 257.0 501890.0 25 0 118750.0 -1 0 105 418.2255560429704 417.2182795763704 1 418.2252990603447 MULTI CID FTMS 0 0 0 5362 280061.5625 0.5064992858573533 -7 0.2949867248535156 4 5 P 1 -1 10.278 0.0 0.0 2.4634 0.0 0.0 302.1544119389665 0.0 302.1544119389665 0.0 10.277586639249154 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.4634 - 9 + 1 2.387 109865.5 1.0 1475 3889 5362 SUDHL4_400M_050219_1,5366 SUDHL4_400M_050219_1,5366, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5368 27.365 9.2 6828200.0 25 0 677460.0 + 41302 VPHTRPVSL 9 62 503.29580998825855 1004.5770670433172 2 503.2958251833916 MULTI CID FTMS 0 0 0 5367 6422965.5 0.9615149443173868 1 -0.008707046508789 1 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 60.07390631473393 0.0260411565414776 5 VPHTR[VP]S{I|L} 9 0 + 80.333 0.0 0.0 7.9967 7.9967 98.275 0.0 0.0 0.0 66.09243748081781 5.546218740408904 5.546218740408904 62.23828478979911 0 1.2302046884880935 1.6989700043360187 1.1989700043360187 0.0 + + VPHTR[VP]S{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}]SS{I|L}PV 7.9967;1.8012 +;- + 177 + 1 2.387 54787.7 1.0 1476 3890 5367 SUDHL4_400M_050219_1,5368 SUDHL4_400M_050219_1,5368,VPHTRPVSL True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5369 27.369 217.0 297990.0 25 0 32892.0 + + 2506 IIHDPGRGAPL 11 109 382.2187471715365 1143.6344121148095 3 382.5526000857353 MULTI CID FTMS 0 0 0 5367 137208.5625 0.9820025885998278 2 -0.0225276947021484 2 Unmodified _ARLHQQRVH_ ENST00000528296.5_1_8:146015816-146017457:-|nuORF;ENSG00000161016|ENST00000528957|RPL8;ENST00000525232.5_1_8:146017155-146017514:-|nuORF 3.944395688203298 0.7769873103969335 5 {I|L}{I|L}HD[DP]{I|L}{I|L} 8 -1 22.853 0.0 0.0 1.9983 0.0 0.0 0.0 224.1235485293913 224.1235485293913 10.63486257521106 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}HD[DP]{I|L}{I|L} 1.9983 - 82 1 2.387 61782.1 1.0 1477 3890 5367 SUDHL4_400M_050219_1,5369 SUDHL4_400M_050219_1,5369,ARLHQQRVH False False IIHDPGRGAPL 27.369229 382.552600085735 1219622.5 5367.0 ENST00000528296.5_1_8:146015816-146017457:-|nuORF;;ENSG00000161016|ENST00000528957|RPL8;;ENST00000525232.5_1_8:146017155-146017514:-|nuORF 4.537411530812581 3.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5371 27.374 145.0 427970.0 25 0 56739.0 -1 ILMEHIHKL 9 96 383.8863275968384 1148.6371533907154 3 383.8864013552666 MULTI CID FTMS 0 0 0 5370 173186.84375 0.1715228894789837 -8 0.2904300689697265 1 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 20.580933911654288 0.2795815587326093 5 {I|L}{I|L}{M(Oxidation (M))|F}{[YC]|[HE]}{I|L}H{I|L}K 9 -1 + 55.572 0.0 0.0 4.838 4.838 90.514 0.0 0.0 0.0 42.45023878595506 9.87765543582988 9.87765543582988 55.57161378144936 0 0.3962566630072954 1.6989700043360187 0.3807196863200844 0.0 {I|L}{I|L}{M(Oxidation (M))|F}{[YC]|[HE]}{I|L}H{I|L}K 4.838 - 139 + 1 2.387 56491.4 1.0 1478 3891 5370 SUDHL4_400M_050219_1,5371 SUDHL4_400M_050219_1,5371,ILMEHIHKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5372 27.378 188.0 550780.0 25 0 29475.0 + 41282 VPHTPARP 8 103 437.7481665652928 873.4817801973855 2 437.7480651736259 MULTI CID FTMS 0 0 0 5370 182930.046875 0.7891421665719968 -1 0.008707046508789 2 Unmodified _VPHTPARP_ REV__ENST00000549319.2_1_1:221052998-221053868:+|nuORF 42.09456458481378 0.1992492688217789 5 VPHT 4 -1 66.785 0.0 0.0 7.6458 0.0 0.0 0.0 436.2320650690063 436.2320650690063 45.09256969938944 0.0 0.0 0.0 0 0.7059771852360797 2.0 1.2302046884880935 0.0 VPHT 7.6458 + + 276 + 1 2.387 85112.3 1.0 1479 3891 5370 SUDHL4_400M_050219_1,5372 SUDHL4_400M_050219_1,5372,VPHTPARP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5373 27.383 268.0 350680.0 25 0 30653.0 45474 YTIQSFRP 8 113 506.2657607112967 1010.5169684893934 2 506.2666503787041 MULTI CID FTMS 0 0 0 5370 125456.0859375 1.0 0 0.0 3 Unmodified _YTIQSFRP_ ENSG00000215029|ENST00000642911|TCP11X2;ENSG00000268235|ENST00000622971|TCP11X1;nc|ENSG00000268235|B4DZS4-2|TCP11X1 16.942295170755138 0.6606234159769251 5 {I|L}MP 3 6 10.069 0.0 0.0 0.9964 0.0 0.0 651.3311907567747 0.0 651.3311907567747 0.0 0.1918026822499285 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}MP 0.9964 - 92 + 1 2.387 77932.4 1.0 1480 3891 5370 SUDHL4_400M_050219_1,5373 SUDHL4_400M_050219_1,5373,YTIQSFRP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5376 27.403 800.0 141430.0 25 0 6405.3 + -1 SRPDSILGMQF 11 117 633.8110147896538 1265.6074766461074 2 633.8113281130791 MULTI CID FTMS 0 0 0 5375 96883.734375 0.0190170283731056 -10 0.3082828521728515 1 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 29.84058131909904 0.3915366693542702 5 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 86.204 0.0 0.0 6.8112 6.8112 85.612 0.0 0.0 0.0 0.7918124604762511 71.99147671565161 0.7918124604762511 2.6233482644911 0 1.416386562212267 0.0 0.3807196863200844 2.147940008672037 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QEQA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[KQ]{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QE[AG]A{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F} 6.8112;6.604;6.0871;6.0871;6.0871;5.8798;5.8798;5.8798;5.3658;5.3658 -;-;-;-;-;-;-;-;-;- 1422 1 2.387 88247.2 0.7900000214576721 1481 3893 5375 SUDHL4_400M_050219_1,5376 SUDHL4_400M_050219_1,5376,SRPDSILGMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5377 27.417 800.0 218930.0 25 0 17669.0 + + 10048 TIMQNPRQY 9 175 575.2876467660903 1148.5607405989806 2 575.7882568240166 MULTI CID FTMS 0 0 0 5375 90774.6875 0.7614548587805434 -1 0.0040321350097656 2 Unmodified _FPPSFSALHF_ ENST00000496813.5_1_6:33239896-33244045:+|nuORF;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENSG00000231500|ENST00000439602|RPS18 10.823927491677226 0.6659270209832991 5 [{I|L}T][HN]PNQM 8 -1 39.848 0.0 0.0 3.4694 0.0 0.0 0.0 210.10920602826263 210.10920602826263 17.39678014709565 0.0 0.0 0.0 0 0.0 2.0 0.2302046884880938 0.5941876774005248 [{I|L}T][HN]PNQM 3.4694 - 2502 1 2.387 133250.0 0.7300000190734863 1482 3893 5375 SUDHL4_400M_050219_1,5377 SUDHL4_400M_050219_1,5377,FPPSFSALHF False False TIMQNPRQY 27.417118 575.788256824017 828493.0 5375.0 ENST00000496813.5_1_6:33239896-33244045:+|nuORF;;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;;ENSG00000231500|ENST00000439602|RPS18 7.242965539296468 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5378 27.42 142.0 331890.0 25 0 58401.0 39095 TWFYTFDQ 8 74 554.2423059808414 1106.4700590284826 2 554.2417480349541 MULTI CID FTMS 0 0 0 5375 240988.1875 1.0 0 0.0 3 Unmodified _TWFYTFDQ_ ENSG00000117091|ENST00000368046|CD48;nc|ENSG00000117091|P09326-2|CD48 2.302733041254933 0.8103549651115762 5 T 1 7 3.0989 0.0 0.0 0.28007 0.0 0.0 553.2400918427389 449.14658533267817 1002.3866771754172 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + T 0.28007 + + 31 + 1 2.387 46573.7 1.0 1483 3893 5375 SUDHL4_400M_050219_1,5378 SUDHL4_400M_050219_1,5378,TWFYTFDQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5379 27.423 175.0 343120.0 25 0 31755.0 + -1 NHGCDLMM 8 91 468.6732043087442 935.3318556842884 2 468.6731445193291 MULTI CID FTMS 0 0 0 5375 186033.625 1.0 0 0.0 4 Oxidation (M) _NHGCDLMM(Oxidation (M))_ REV__ENSG00000204713|ENST00000377199|TRIM27;REV__ENST00000481474.5_1_6:28876558-28891553:-|nuORF;REV__nc|ENSG00000204713|P14373-2|TRIM27 2.577480529830294 0.808687252328423 5 Y 1 -1 14.604 0.0 0.0 1.5614 0.0 0.0 754.2576502172947 0.0 754.2576502172947 0.0 2.909393809954892 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5614 - 35 + 1 2.387 52093.3 1.0 1484 3893 5375 SUDHL4_400M_050219_1,5379 SUDHL4_400M_050219_1,5379,NHGCDLMM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5382 27.432 105.0 575570.0 25 0 86556.0 + 42807 VVKPPGSSL 9 88 442.2659579004773 882.5173628677545 2 442.2659179568291 MULTI CID FTMS 0 0 0 5381 568951.25 0.4640425895468917 7 -0.1380577087402343 1 Unmodified _VVKPPGSSL_ ENSG00000163930|ENST00000460680|BAP1 42.09456458481378 0.0639583784996157 5 VVKD 4 6 44.693 0.0 0.0 5.0642 0.0 0.0 0.0 438.2322069281764 438.2322069281764 28.50711233356286 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 VVKD 5.0642 - 67 + 1 2.384 51811.0 1.0 1485 3895 5381 SUDHL4_400M_050219_1,5382 SUDHL4_400M_050219_1,5382,VVKPPGSSL True True VVKPPGSSL 27.432028 442.265917956829 12918788.0 5381.0 ENSG00000163930|ENST00000460680|BAP1 5.889573415120442 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5383 27.44 412.0 327020.0 25 0 30202.0 + 14930 ILMEHIHKL 9 140 575.324622191135 1148.6346914490698 2 575.3259155154228 MULTI CID FTMS 0 0 0 5381 144177.546875 0.6599460477602769 -1 0.0039844512939453 2 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 53.40400417844725 0.0329064971918313 5 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L} 9 0 + 78.392 0.0 0.0 6.8248 6.8248 95.829 0.0 0.0 0.0 39.702071512843546 10.620992307467802 10.620992307467802 39.794282231834686 0 1.7104093769761874 1.6989700043360187 0.7302046884880937 0.1923877696554315 + + {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L};{I|L}{I|L}[{M(Oxidation (M))|F}V]NQ[YG][VP];[{I|L}T][YG]QN{[NV]|[RG]}K{I|L};[{I|L}T][KC][KC]D{I|L}{I|L}{I|L};[{I|L}T][YG]Q[QT]{I|L}{I|L}{I|L};[{I|L}T][YG]Q[WR]{I|L}{I|L};[{I|L}T][YG][DN]K{I|L}{I|L}{I|L};[H{I|L}]E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}HK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RR{M(Oxidation (M))|F}WK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KG][WH]HK{I|L} 6.8248;3.3603;3.0514;2.4986;2.3215;2.0149;1.8318;1.2132;0.96718;0.83721 +;-;-;-;-;-;-;-;-;- + 614 + 1 2.384 102491.2 1.0 1486 3895 5381 SUDHL4_400M_050219_1,5383 SUDHL4_400M_050219_1,5383,ILMEHIHKL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5384 27.454 800.0 123760.0 25 0 4103.9 -1 NTTVSYMCIFA 11 138 661.7904391213848 1321.5663253095695 2 662.2898437380791 MULTI CID FTMS 0 0 0 5381 93814.3125 0.4760748844030208 -6 0.088724136352539 3 Carbamidomethyl (C),Oxidation (M) _NTTVSYM(Oxidation (M))C(Carbamidomethyl (C))IFA_ ENST00000508965.5_1_4:81105136-81117516:+|nuORF;ENST00000515013.5_1_4:81112705-81118128:+|nuORF 15.248480904072842 0.7179608125786238 5 {NN|[MP]|[D{I|L}]|[EV]}D[WD]AQQNA{M(Oxidation (M))|F} 11 -1 + 62.941 0.0 0.0 4.7626 4.7626 78.933 0.0 0.0 0.0 4.862557135977006 16.575773191777934 4.862557135977006 1.804560644581308 0 0.5796896906561032 1.0457574905606752 0.0 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}D[WD]AQQNA{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}DWWQQNA{M(Oxidation (M))|F};[AG]NC{I|L}{[DA]|[EG]}AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}C{I|L}{[DA]|[EG]}AQQNA{M(Oxidation (M))|F};[AG]GC(Carbamidomethyl (C)){I|L}{[DA]|[EG]}AQQNA{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}D[WD]AQ[AG]NA{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}D[WD]AQQGGA{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}D[WD]A[AG]QNA{M(Oxidation (M))|F};[AG]NC[PA]MAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}C[PA]MAQQNA{M(Oxidation (M))|F} 4.7626;4.6261;4.3947;4.3314;4.3214;4.0719;4.0719;4.0719;4.0337;3.9703 -;-;-;-;-;-;-;-;-;- 6294 1 2.384 78859.9 0.699999988079071 1487 3895 5381 SUDHL4_400M_050219_1,5384 SUDHL4_400M_050219_1,5384,NTTVSYMCIFA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5387 27.474 800.0 188160.0 25 0 11842.0 + 12208 GQTGTKSVF 9 167 462.7430695795208 923.4715862258416 2 462.7428771853447 MULTI CID FTMS 0 0 0 5386 139328.15625 0.3310577956909405 -4 0.0706310272216796 1 Unmodified _GQTGTKSVF_ ENSG00000004897|ENST00000066544|CDC27;ENST00000525495.6_2_17:45219385-45266538:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 41.95555342248728 0.0647214845423414 5 {[QG]|[NA]}TGT[KS]V{M(Oxidation (M))|F} 9 0 + 31.717 0.0 0.0 3.4346 3.4346 85.489 0.0 0.0 0.0 11.14403637261074 1.1922841545991003 1.1922841545991003 20.4636914340576 0 1.25 0.6989700043360187 0.0 0.0 + + {[QG]|[NA]}TGT[KS]V{M(Oxidation (M))|F};[KT]GTS{[QG]|[NA]}V{M(Oxidation (M))|F};[KT]GST{[QG]|[NA]}V{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}D[KP]HS{I|L};{NN|[MP]|[D{I|L}]|[EV]}DT[HV]KP;{NN|[MP]|[D{I|L}]|[EV]}{[SA]|[TG]}[YR]S{I|L} 3.4346;1.2186;1.1212;0.60405;0.10035;0.027274 +;-;-;-;-;- + 585 + 1 2.384 116406.6 0.7300000190734863 1488 3897 5386 SUDHL4_400M_050219_1,5387 SUDHL4_400M_050219_1,5387,GQTGTKSVF True True GQTGTKSVF 27.473889 462.742877185345 2407917.5 5386.0 ENST00000525495.6_2_17:45219385-45266538:-|nuORF;;ENSG00000004897|ENST00000066544|CDC27;;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;;nc|ENSG00000004897|P30260-2|CDC27 4.608525673548381 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5388 27.488 800.0 241270.0 25 0 13896.0 + 7200 EEQLQQIRAE 10 160 622.3181762152481 1242.621799497296 2 622.3184081912041 MULTI CID FTMS 0 0 0 5386 129722.1640625 0.4737174474753499 -2 0.0302906036376953 2 Unmodified _EEQLQQIRAE_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 108.26204199777034 0.0037791241451545 5 EEQ{I|L}QQ{I|L}RAE 10 0 + 92.182 0.0 0.0 7.4183 7.4183 92.353 0.0 0.0 0.0 65.9484657500754 21.247424555940555 21.247424555940555 9.164539485499247 0 1.7302046884880935 1.6989700043360187 1.301203852579394 1.066901560044258 + + EEQ{I|L}QQ{I|L}RAE;EEQ{I|L}Q[AG]{I|L}RAE;EE[AG]{I|L}QQ{I|L}RAE;EEQ{I|L}[AG]Q{I|L}RAE;EEQ{I|L}[AG][AG]{I|L}RAE;EE[AG]{I|L}[AG]Q{I|L}RAE;EE[AG]{I|L}Q[AG]{I|L}RAE;[AG]{I|L}R{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}Q[HC];[Q{I|L}]R{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}Q[HC];[AG]{I|L}Q{M(Oxidation (M))|F}VQ{I|L}Q[HC] 7.4183;6.6808;6.6808;6.6808;5.9462;5.9462;5.9462;4.4529;4.3578;4.3108 +;-;-;-;-;-;-;-;-;- + 1117 + 1 2.384 144634.0 0.8100000023841858 1489 3897 5386 SUDHL4_400M_050219_1,5388 SUDHL4_400M_050219_1,5388,EEQLQQIRAE True True EEQLQQIRAE 27.487726 622.318408191204 1242625.625 5386.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 6.257315953572591 2.0 True 10.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 5389 27.495 405.0 293410.0 25 0 25992.0 + 11137 GEIGTKTTL 9 151 460.25825558224193 918.501958231284 2 460.2575866580009 MULTI CID FTMS 0 0 0 5386 105144.4921875 0.7879564657476951 -2 0.0302906036376953 3 Unmodified _GEIGTKTTL_ ENSG00000175792|ENST00000322623|RUVBL1 31.26834338654808 0.1333407332142048 5 {[DA]|[EG]}{I|L}GT 5 4 40.744 0.0 0.0 4.4359 0.0 0.0 0.0 458.2636202447876 458.2636202447876 24.12819503499536 0.0 0.0 0.0 0 0.8252574989159953 1.5228787452803376 0.3054621874040891 0.0 + {[DA]|[EG]}{I|L}GT 4.4359 + + 442 + 1 2.384 97389.8 1.0 1490 3897 5386 SUDHL4_400M_050219_1,5389 SUDHL4_400M_050219_1,5389,GEIGTKTTL False True GEIGTKTTL 27.494958 460.257586658001 618395.875 5386.0 ENSG00000175792|ENST00000322623|RUVBL1 2.03598682085673 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5391 27.503 281.0 155350.0 25 0 9034.7 + 26239 NQKPPSAEF 9 88 509.2537406081808 1016.4929282831616 2 509.2538329958916 MULTI CID FTMS 0 0 0 5390 91090.1796875 0.2522433010120415 -8 0.134552001953125 1 Unmodified _NQKPPSAEF_ ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST 19.256988751693697 0.3154191944385105 5 HK[HS] 4 7 20.445 0.0 0.0 2.0114 0.0 0.0 509.2408619611344 0.0 509.2408619611344 0.0 3.455612550363796 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 HK[HS] 2.0114 - 83 1 2.384 42207.6 1.0 1491 3898 5390 SUDHL4_400M_050219_1,5391 SUDHL4_400M_050219_1,5391,NQKPPSAEF False True NQKPPSAEF 27.502595 509.253832995892 5973441.0 5390.0 nc|ENSG00000151914|Q03001-14|DST;;nc|ENSG00000151914|Q03001-8|DST;;nc|ENSG00000151914|Q03001|DST;;ENSG00000151914|ENST00000680361|DST 6.239020983378093 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5392 27.506 193.0 308470.0 25 0 72466.0 -1 0 96 455.21591654567663 454.20864007907664 1 455.2161132693291 MULTI CID FTMS 0 0 0 5390 15159.1630859375 0.0682344903444595 9 -0.2412242889404297 2 5 V 1 -1 11.259 0.0 0.0 2.4788 0.0 0.0 337.1291474416727 0.0 337.1291474416727 0.0 5.57269750655887 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.4788 - 11 + 1 2.384 52552.1 1.0 1492 3898 5390 SUDHL4_400M_050219_1,5392 SUDHL4_400M_050219_1,5392, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5393 27.509 122.0 571780.0 25 0 62578.0 + 19746 LGPSHAQHH 9 106 492.2434953195039 982.4724377058078 2 492.2435180544853 MULTI CID FTMS 0 0 0 5390 338497.90625 0.3426904237302184 -6 0.1120243072509765 3 Unmodified _LGPSHAQHH_ REV__ENST00000302351.8_1_5:73936805-73937162:-|nuORF 36.04419817259434 0.0971720506436186 5 {[VA]|[{I|L}G]}QE 4 -1 46.599 0.0 0.0 4.743 0.0 0.0 0.0 552.2419110965176 552.2419110965176 39.69273760456403 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.5 0.3807196863200844 {[VA]|[{I|L}G]}QE 4.743 - 94 + 1 2.384 59829.5 1.0 1493 3898 5390 SUDHL4_400M_050219_1,5393 SUDHL4_400M_050219_1,5393,LGPSHAQHH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5394 27.515 316.0 314110.0 25 0 63649.0 + 1382 ALAFFIEPR 9 114 532.3004014094097 1062.5862498856193 2 532.3045532107353 MULTI CID FTMS 0 0 0 5390 121656.0859375 0.7332706514477171 2 -0.0557537078857421 4 Unmodified _ALAFFIEPR_ REV__ENSG00000125571|ENST00000263326|IL37;REV__nc|ENSG00000125571|Q9NZH6-2|IL37;REV__nc|ENSG00000125571|Q9NZH6-4|IL37 11.640296217721598 0.521594087909532 5 PR 2 -1 21.337 0.0 0.0 2.008 0.0 0.0 791.4225058444068 0.0 791.4225058444068 0.0 4.346980859148324 0.0 0.0 0 0.5 0.0 0.0 0.1643943297944484 PR 2.008 + + 215 + 1 2.384 79680.9 1.0 1494 3898 5390 SUDHL4_400M_050219_1,5394 SUDHL4_400M_050219_1,5394,ALAFFIEPR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5395 27.519 263.0 348550.0 25 0 45830.0 -1 0 124 518.2795609163122 517.2722844497122 1 518.2800781130791 MULTI CID FTMS 0 0 0 5390 155614.1875 1.0 0 0.0 5 5 Y 1 -1 16.99 0.0 0.0 3.2845 0.0 0.0 336.19818579424185 0.0 336.19818579424185 0.0 7.7815125038364386 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.2845 - 67 + 1 2.384 71487.9 1.0 1495 3898 5390 SUDHL4_400M_050219_1,5395 SUDHL4_400M_050219_1,5395, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5396 27.527 400.0 281480.0 25 0 31497.0 -1 0 133 506.3166186169963 505.30934215039633 1 506.3163940310478 MULTI CID FTMS 0 0 0 5390 98062.09375 0.5128956692662423 15 -0.4723339080810547 6 5 Y 1 -1 10.596 0.0 0.0 2.0969 0.0 0.0 324.23502987187914 0.0 324.23502987187914 0.0 0.2124922194624545 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.0969 - 58 + 1 2.384 90391.6 1.0 1496 3898 5390 SUDHL4_400M_050219_1,5396 SUDHL4_400M_050219_1,5396, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5398 27.531 102.0 450250.0 25 0 28776.0 + -1 FLAKMEQPL 9 87 364.8633980329992 1091.5683646991977 3 364.8632690310478 MULTI CID FTMS 0 0 0 5397 507673.34375 0.2091732643620004 7 -0.1652088165283203 1 Oxidation (M) _FLAKM(Oxidation (M))EQPL_ REV__ENSG00000187742|ENST00000375807|SECISBP2;REV__nc|ENSG00000187742|Q96T21-2|SECISBP2;REV__nc|ENSG00000187742|Q96T21-3|SECISBP2 10.799506525563784 0.5443532743200366 5 PPMK 4 -1 17.167 0.0 0.0 1.5727 0.0 0.0 232.1431523645394 403.1621798151001 635.3053321796394 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPMK 1.5727 - 164 + 1 2.384 48285.5 1.0 1497 3899 5397 SUDHL4_400M_050219_1,5398 SUDHL4_400M_050219_1,5398,FLAKMEQPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5399 27.534 134.0 362300.0 25 0 40252.0 38100 TPLAGFGYGLP 11 91 546.7915683327644 1091.5685837323288 2 546.7914306521416 MULTI CID FTMS 0 0 0 5397 384727.6875 0.190167551159768 8 -0.2095813751220703 2 Unmodified _TPLAGFGYGLP_ ENSG00000005882|ENST00000503176|PDK2;ENST00000512204.5_1_17:48185497-48187458:+|nuORF;nc|ENSG00000005882|Q15119-2|PDK2 19.256988751693697 0.6345794173041263 5 TPMK{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}P 9 5 + 70.055 0.0 0.0 6.4178 6.4178 93.541 0.0 0.0 0.0 51.28762827624736 10.908458057352178 10.908458057352178 17.299284565191428 0 1.4361818737241734 2.0 0.0 0.0 TPMK{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}P;TPMK{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}P]Y;TP[YV]PK[QP]Y;TP[YV]PK[YQ]P;TPW[H{I|L}][WR]P;[TP][{M(Oxidation (M))|F}V]QQY{I|L}P;{[VA]|[{I|L}G]}WT{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}P;TP[YV]PK{[ES]|[DT]|[{I|L}C]}[TA];{NN|[MP]|[D{I|L}]|[EV]}KT[HA]PT{I|L}P;[{M(Oxidation (M))|F}V][NP]{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L}P 6.4178;4.833;3.3548;3.1085;3.0409;2.571;1.9872;1.8758;1.8518;1.565 -;-;-;-;-;-;-;-;-;- 422 + 1 2.384 42967.5 1.0 1498 3899 5397 SUDHL4_400M_050219_1,5399 SUDHL4_400M_050219_1,5399,TPLAGFGYGLP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5400 27.548 800.0 126670.0 25 0 7186.8 + -1 LLPEFFMCS 9 137 580.2597392748239 1158.5049256164475 2 580.2601806521416 MULTI CID FTMS 0 0 0 5397 110189.3359375 0.5720808664852673 -15 0.4296379089355469 3 Carbamidomethyl (C),Oxidation (M) _LLPEFFM(Oxidation (M))C(Carbamidomethyl (C))S_ REV__ENSG00000171150|ENST00000394861|SOCS5 16.942295170755138 0.3780752226737986 5 {I|L}{I|L}EPP 5 -1 47.888 0.0 0.0 4.1336 0.0 0.0 0.0 606.1646059333832 606.1646059333832 34.699915470362015 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 {I|L}{I|L}EPP 4.1336 - 233 + 1 2.384 79665.4 0.5899999737739563 1499 3899 5397 SUDHL4_400M_050219_1,5400 SUDHL4_400M_050219_1,5400,LLPEFFMCS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5401 27.551 139.0 262000.0 25 0 28054.0 1669 ALNYRKHY 8 69 532.7843985981588 1063.5542442631174 2 532.7851440310478 MULTI CID FTMS 0 0 0 5397 99548.1015625 0.7820918397253198 -2 0.0690040588378906 4 Unmodified _ALNYRKHY_ ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-1|NEB;nc|ENSG00000183091|P20929-3|NEB;nc|ENSG00000183091|P20929-4|NEB 10.183394434864962 0.7604730176254005 5 Y 1 7 16.99 0.0 0.0 1.5974 0.0 0.0 882.4800845724909 0.0 882.4800845724909 0.0 5.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.5974 + + 35 + 1 2.384 31400.8 1.0 1500 3899 5397 SUDHL4_400M_050219_1,5401 SUDHL4_400M_050219_1,5401,ALNYRKHY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5403 27.558 277.0 343660.0 25 0 106260.0 18739 LALGTPENP 9 95 456.24419458524704 910.473836237294 2 456.2451660037041 MULTI CID FTMS 0 0 0 5402 80007.203125 0.7101293747554817 1 -0.0104293823242187 1 Unmodified _LALGTPENP_ CON__Q6T181;ENSG00000129214|ENST00000380450|SHBG;nc|ENSG00000129214|P04278-2|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG 10.823927491677226 0.5436922275383211 5 V 1 9 11.783 0.0 0.0 1.2941 0.0 0.0 793.394656405066 0.0 793.394656405066 0.0 2.0288267309199703 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2941 - 55 + 1 2.384 77444.9 1.0 1501 3900 5402 SUDHL4_400M_050219_1,5403 SUDHL4_400M_050219_1,5403,LALGTPENP False False False False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 5404 27.561 144.0 489770.0 25 0 39762.0 -1 0 86 429.2340591675244 428.2267827009244 1 429.2339660525322 MULTI CID FTMS 0 0 0 5402 310378.15625 0.4354244718515321 14 -0.4789009094238281 2 5 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 2.913 0.0 0.0 263.1474197632275 0.0 263.1474197632275 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.913 - 6 + 1 2.384 60653.2 1.0 1502 3900 5402 SUDHL4_400M_050219_1,5404 SUDHL4_400M_050219_1,5404, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5407 27.576 380.0 307440.0 25 0 30225.0 + 11717 GLHSVAEGV 9 124 434.73004514645976 867.4455373597195 2 434.7289306521416 MULTI CID FTMS 0 0 0 5406 87357.2109375 0.2681875064218372 -4 0.0704059600830078 1 Unmodified _GLHSVAEGV_ ENSG00000117174|ENST00000370574|ZNHIT6;nc|ENSG00000117174|Q9NWK9-2|ZNHIT6 23.1484247019978 0.2366544122328345 5 SVAER 5 5 17.541 0.0 0.0 2.0221 0.0 0.0 307.16475112129064 0.0 307.16475112129064 0.0 2.84801742864806 0.0 0.0 0 0.3182503180159344 0.0 0.5941876774005248 0.0 SVAER 2.0221 - 81 1 2.384 94686.9 1.0 1503 3902 5406 SUDHL4_400M_050219_1,5407 SUDHL4_400M_050219_1,5407,GLHSVAEGV False True GLHSVAEGV 27.575986 434.728930652142 1621065.375 5406.0 nc|ENSG00000117174|Q9NWK9-2|ZNHIT6;;ENSG00000117174|ENST00000370574|ZNHIT6 8.089075406392416 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5408 27.59 800.0 353930.0 25 0 54839.0 4729 DEEMKEAAGSL 11 146 590.266171126569 1178.517789319938 2 590.2662231326103 MULTI CID FTMS 0 0 0 5406 161463.34375 0.0422047579089316 -7 0.1380577087402343 2 Unmodified _DEEMKEAAGSL_ ENSG00000053254|ENST00000557258|FOXN3;nc|ENSG00000053254|O00409|FOXN3 34.93206674587334 0.2904649469012649 5 QHVDAAEK 8 9 79.383 0.0 0.0 6.7359 0.0 0.0 282.0830371833967 0.0 282.0830371833967 0.0 45.43350257770477 0.0 0.0 0 2.885151878060192 0.0 0.0 1.372363747448347 QHVDAAEK 6.7359 - 1427 1 2.384 211541.3 0.8399999737739563 1504 3902 5406 SUDHL4_400M_050219_1,5408 SUDHL4_400M_050219_1,5408,DEEMKEAAGSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5409 27.599 503.0 227240.0 25 0 21107.0 + 42804 VVKPPGQDL 9 136 476.7773818582479 0 476.7773010134697 PEAK CID FTMS 0 0 0 5406 88608.2265625 0.997219583529257 -3 0.0387630462646484 3 Unmodified _VVKPPGQDL_ ENSG00000163006|ENST00000295124|CCDC138;nc|ENSG00000163006|Q96M89-2|CCDC138 27.628801355627647 0.1319135480000405 5 VKQ 3 6 20.087 0.0 0.0 2.111 0.0 0.0 99.07092474989584 494.2362764947876 593.3072012446834 0.0 0.0 0.0 0.0 0 0.5843105420796064 0.0 0.0 0.3252574989159953 VKQ 2.111 - 67 + 1 2.384 91379.5 1.0 1505 3902 5406 SUDHL4_400M_050219_1,5409 SUDHL4_400M_050219_1,5409,VVKPPGQDL False True VVKPPGQDL 27.59868 476.77730101347 563528.375 5406.0 ENSG00000163006|ENST00000295124|CCDC138;;nc|ENSG00000163006|Q96M89-2|CCDC138 6.110035260518392 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5410 27.607 442.0 175060.0 25 0 19995.0 + 15859 ISNPPGSNL 9 110 449.734528634532 897.454504335864 2 449.7347595095634 MULTI CID FTMS 0 0 0 5406 89013.6171875 0.4687145519939741 -9 0.1783981323242187 4 Unmodified _ISNPPGSNL_ ENSG00000060237|ENST00000315939|WNK1;ENST00000540885.1_1_12:1016996-1017955:+|nuORF;nc|ENSG00000060237|Q9H4A3-2|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1;nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1 16.149105407346934 0.3995459350917656 5 {[TV]|[{I|L}S]}P 3 6 20.29 0.0 0.0 2.2609 0.0 0.0 0.0 597.2624016349453 597.2624016349453 6.795606106491903 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[TV]|[{I|L}S]}P 2.2609 - 172 1 2.384 61992.3 1.0 1506 3902 5406 SUDHL4_400M_050219_1,5410 SUDHL4_400M_050219_1,5410,ISNPPGSNL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5412 27.611 72.0 543340.0 25 0 38371.0 5442 DLPSMPEPAL 10 78 535.2671910889866 1068.519829244773 2 535.2672607302666 MULTI CID FTMS 0 0 0 5411 661104.4375 0.031718782685336 17 -0.6426830291748047 1 Unmodified _DLPSMPEPAL_ CIITA|p.L1020Sfs*30|1|0.33|ENSG00000179583|chr16:10916453-10916453|C/-|frameshift_variant;CIITA|p.V448Lfs*34|1|0.52|ENSG00000179583|chr16:10906833-10906834|TG/-|frameshift_variant;CIITA|p.Y641Cfs*107|1|0.19|ENSG00000179583|chr16:10907413-10907414|TA/-|frameshift_variant;ENSG00000179583|ENST00000324288|CIITA;ENST00000570546.5_1_16:10971115-11002148:+|nuORF;ENST00000573309.5_1_16:10971115-11002148:+|nuORF;nc|ENSG00000179583|P33076-2|CIITA;nc|ENSG00000179583|P33076-3|CIITA;nc|ENSG00000179583|P33076-4|CIITA;nc|ENSG00000179583|P33076|CIITA 14.838274106304384 0.5985701837916485 5 QDT[WK]A{I|L} 7 8 56.815 0.0 0.0 5.3172 0.0 0.0 208.0820983871543 0.0 208.0820983871543 0.0 51.128588745853776 0.0 0.0 0 2.548455006504028 0.0 0.3494850021680094 0.0 QDT[WK]A{I|L} 5.3172 - 149 + 1 2.384 37824.8 1.0 1507 3903 5411 SUDHL4_400M_050219_1,5412 SUDHL4_400M_050219_1,5412,DLPSMPEPAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5413 27.613 62.0 749340.0 25 0 77684.0 10870 GAEVELSAPV 10 78 486.255198508216 970.495844083232 2 486.2551452517509 MULTI CID FTMS 0 0 0 5411 821174.0625 0.7471049564592002 -5 0.1116161346435546 2 Unmodified _GAEVELSAPV_ ENSG00000169169|ENST00000598293|CPT1C;ENST00000295404.9_1_19:50194996-50204826:+|nuORF;ENST00000599023.5_1_19:50195509-50213852:+|nuORF;ENST00000600944.5_1_19:50195509-50200723:+|nuORF;nc|ENSG00000169169|Q8TCG5-2|CPT1C;nc|ENSG00000169169|Q8TCG5-3|CPT1C 26.88365393820708 0.3646707531412818 5 [{I|L}T]{NN|[MP]|[D{I|L}]|[EV]}[QA]DPV 9 6 + 31.654 0.0 0.0 3.2617 3.2617 84.759 0.0 0.0 0.0 2.497549464332 2.7018122933698443 2.497549464332 15.740312677277188 0 0.0 2.0 0.0 0.25 [{I|L}T]{NN|[MP]|[D{I|L}]|[EV]}[QA]DPV;[{I|L}T]D[QA]{NN|[MP]|[D{I|L}]|[EV]}[VP];{NN|[MP]|[D{I|L}]|[EV]}T[VG][RD][VP] 3.2617;1.6398;0.9876 -;-;- 158 + 1 2.384 46054.9 1.0 1508 3903 5411 SUDHL4_400M_050219_1,5413 SUDHL4_400M_050219_1,5413,GAEVELSAPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5414 27.616 174.0 234350.0 25 0 20026.0 + 17316 KLTEENTTL 9 76 524.7796836233967 1047.5448143135934 2 524.7798339724541 MULTI CID FTMS 0 0 0 5411 308008.09375 0.3873505923565192 5 -0.1627349853515625 3 Unmodified _KLTEENTTL_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 40.23920728925047 0.0741434193262949 5 [K{I|L}]TEENTT{I|L} 9 0 + 50.288 0.0 0.0 4.8006 4.8006 82.308 0.0 0.0 0.0 3.748162098248997 29.27494066097715 3.748162098248997 4.771212547196626 0 0.5 0.0 0.5 0.4247425010840047 + + [K{I|L}]TEENTT{I|L};[{I|L}T]KEENTT{I|L};[K{I|L}]TEEGGTT{I|L};[{I|L}T]KEEGGTT{I|L};{[DS]|[MA]|[CV]|TT}[R{I|L}]E[C(Carbamidomethyl (C))R]{I|L} 4.8006;4.3451;3.9216;3.4661;0.34294 +;-;-;-;- + 354 1 2.384 37310.0 1.0 1509 3903 5411 SUDHL4_400M_050219_1,5414 SUDHL4_400M_050219_1,5414,KLTEENTTL True True KLTEENTTL 27.616229 524.779833972454 3598168.75 5411.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 6.761109352111816 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5415 27.622 292.0 210010.0 25 0 18976.0 + 16227 IVNENLVER 9 88 543.3017118458557 1084.5888707585111 2 543.3030883669853 MULTI CID FTMS 0 0 0 5411 114188.609375 0.7382481243194531 -2 0.0454330444335937 4 Unmodified _IVNENLVER_ ENSG00000048392|ENST00000251810|RRM2B;ENSG00000171848|ENST00000304567|RRM2;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;nc|ENSG00000048392|Q7LG56-2|RRM2B;nc|ENSG00000048392|Q7LG56-6|RRM2B;nc|ENSG00000171848|P31350-2|RRM2 43.9818466556824 0.0535980856389242 5 {I|L}VNEN{I|L}VER 9 0 + 89.602 0.0 0.0 8.2614 8.2614 94.447 0.0 0.0 0.0 71.81031895404267 10.228787452803374 10.228787452803374 9.208187539523747 0 0.7742275032520141 2.0 0.0 0.8494850021680094 + + {I|L}VNEN{I|L}VER;{I|L}VNEGG{I|L}VER;{I|L}VGGEN{I|L}VER;{I|L}VGGEGG{I|L}VER 8.2614;7.4124;7.4124;6.5674 +;-;-;- + 218 + 1 2.384 54164.3 1.0 1510 3903 5411 SUDHL4_400M_050219_1,5415 SUDHL4_400M_050219_1,5415,IVNENLVER True True IVNENLVER 27.621586 543.303088366985 709916.6875 5411.0 nc|ENSG00000048392|Q7LG56-6|RRM2B;;ENST00000491447.1_1_2:10262886-10264978:+|nuORF;;nc|ENSG00000171848|P31350-2|RRM2;;ENSG00000171848|ENST00000304567|RRM2;;nc|ENSG00000048392|Q7LG56-2|RRM2B;;ENSG00000048392|ENST00000251810|RRM2B 6.186674276987712 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5416 27.628 339.0 224200.0 25 0 22865.0 + 30994 RLDSTGVNV 9 117 480.758541145288 959.502529357376 2 480.7585021853447 MULTI CID FTMS 0 0 0 5411 105098.4765625 0.0934567242854397 -5 0.1116161346435546 5 Unmodified _RLDSTGVNV_ ENSG00000196550|ENST00000367128|FAM72A;ENSG00000215784|ENST00000400889|FAM72D;ENSG00000263513|ENST00000584486|FAM72C;nc|ENSG00000196550|Q5TYM5-2|FAM72A 19.361941925380144 0.3125782356748823 5 GVNV 4 5 40.745 0.0 0.0 4.2465 0.0 0.0 572.2921009748062 0.0 572.2921009748062 0.0 28.75569708000178 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + GVNV 4.2465 + + 196 1 2.384 62045.2 1.0 1511 3903 5411 SUDHL4_400M_050219_1,5416 SUDHL4_400M_050219_1,5416,RLDSTGVNV False True RLDSTGVNV 27.627721 480.758502185345 4762029.0 5411.0 ENSG00000196550|ENST00000367128|FAM72A;;ENSG00000215784|ENST00000400889|FAM72D;;ENSG00000263513|ENST00000584486|FAM72C;;nc|ENSG00000196550|Q5TYM5-2|FAM72A 3.3691748778025308 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5417 27.633 303.0 386250.0 25 0 20683.0 + 2384 AQNAVRLHY 9 144 357.8611881588199 1070.5617350766595 3 357.8611328005791 MULTI CID FTMS 0 0 0 5411 151909.578125 1.0 0 0.0 6 Unmodified _AQNAVRLHY_ ENSG00000168036|ENST00000349496|CTNNB1 7.101721422024254 0.6667666702315642 5 Y 1 8 13.099 0.0 0.0 1.2236 0.0 0.0 889.4874075393535 0.0 889.4874075393535 0.0 -2.078343878162343 -2.078343878162343 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2236 + + 166 + 1 2.384 97647.1 1.0 1512 3903 5411 SUDHL4_400M_050219_1,5417 SUDHL4_400M_050219_1,5417,AQNAVRLHY False True AQNAVRLHY 27.633257 357.861132800579 670655.0 5411.0 ENSG00000168036|ENST00000349496|CTNNB1 2.038343826929728 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5419 27.638 65.0 871930.0 25 0 82875.0 + 41303 VPHTRPVSL 9 70 503.29580998825855 1004.5770670433172 2 503.2957946658134 MULTI CID FTMS 0 0 0 5418 687077.125 0.1028551256559178 15 -0.5805988311767578 1 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 38.17557092003332 0.0854718145212029 5 VPH 3 6 50.005 0.0 0.0 4.9777 0.0 0.0 0.0 668.3734659987165 668.3734659987165 38.74602458111578 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + VPH 4.9777 + + 31 + 1 2.384 49331.7 1.0 1513 3904 5418 SUDHL4_400M_050219_1,5419 SUDHL4_400M_050219_1,5419,VPHTRPVSL True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5420 27.64 70.0 932490.0 25 0 156020.0 -1 ILMEHIHKL 9 86 383.8863275968384 1148.6371533907154 3 383.8863708376884 MULTI CID FTMS 0 0 0 5418 591213.875 0.5855335771720058 5 -0.1568584442138672 2 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 19.62595529434964 0.305431704817896 5 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}H[K{I|L}] 9 -1 + 55.296 0.0 0.0 4.814 4.814 90.426 0.0 0.0 0.0 39.09765299137284 5.386277828772137 5.386277828772137 55.295540574256776 0 0.3935078169319297 1.5228787452803376 0.4247425010840047 0.0 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}H[K{I|L}] 4.814 + + 138 + 1 2.384 57319.0 1.0 1514 3904 5418 SUDHL4_400M_050219_1,5420 SUDHL4_400M_050219_1,5420,ILMEHIHKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5422 27.644 12.0 2737300.0 25 0 170250.0 + -1 SRPDSILGMQF 11 66 633.8110147896538 1265.6074766461074 2 633.8111450076103 MULTI CID FTMS 0 0 0 5421 4350055.0 0.8538597308746672 2 -0.096536636352539 1 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 20.41453444215458 0.6105011870913812 5 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 54.931 0.0 0.0 4.3403 4.3403 76.628 0.0 0.0 0.0 1.1531133696193052 6.750583696585494 1.1531133696193052 1.1531133696193052 0 0.9124379954164592 0.0 0.0 1.1861818737241734 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[RH]{M(Oxidation (M))|F}A[KG][Y{I|L}]Q{M(Oxidation (M))|F};[NP][R{I|L}]HHA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 4.3403;4.2492;3.6162;3.6162;3.5251;3.5251;2.8949;2.8038;2.0088;1.6407 -;-;-;-;-;-;-;-;-;- 230 1 2.384 32205.0 1.0 1515 3905 5421 SUDHL4_400M_050219_1,5422 SUDHL4_400M_050219_1,5422,SRPDSILGMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5423 27.648 187.0 264770.0 25 0 46621.0 + 35909 SVNGERLGTY 10 74 548.2740376556778 1094.5335223781556 2 548.2741577029228 MULTI CID FTMS 0 0 0 5421 183585.515625 0.9370788339568576 1 -0.052164077758789 2 Unmodified _SVNGERLGTY_ ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF 26.268140514670165 0.3785003716575977 5 [VS]NW 4 7 44.693 0.0 0.0 4.0833 0.0 0.0 0.0 605.3053682916624 605.3053682916624 26.73393743112328 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [VS]NW 4.0833 - 14 + 1 2.384 44084.7 1.0 1516 3905 5421 SUDHL4_400M_050219_1,5423 SUDHL4_400M_050219_1,5423,SVNGERLGTY False True SVNGERLGTY 27.64799 548.274157702923 1055948.25 5421.0 ENSG00000084623|ENST00000677711|EIF3I;;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;;ENST00000489353.5_1_1:32688042-32691823:+|nuORF 1.9530317435661952 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5424 27.662 800.0 171600.0 25 0 6132.8 + 16547 KAWENSPNV 9 156 522.7591129775733 1043.5036730219465 2 522.7588989138603 MULTI CID FTMS 0 0 0 5421 192869.15625 0.3734127284960963 -4 0.0785045623779296 3 Unmodified _KAWENSPNV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 88.95385435242217 0.0153473310052057 5 {[QV]|[N{I|L}]|[RA]|[KV]}T{[WN]|[YH]}SPNV 9 3 + 63.642 0.0 0.0 6.0989 6.0989 83.527 0.0 0.0 0.0 5.2853716820872165 15.233098926917704 5.2853716820872165 2.385606273598313 0 1.4731975075880328 1.3979400086720375 0.7059771852360797 1.8539171939081167 {[QV]|[N{I|L}]|[RA]|[KV]}T{[WN]|[YH]}SPNV;{[QV]|[N{I|L}]|[RA]|[KV]}TS{[WN]|[YH]}PNV;{[QV]|[N{I|L}]|[RA]|[KV]}H[YT]SPNV;[VG]AT{[WN]|[YH]}SPNV;[VG]ATS{[WN]|[YH]}PNV;[{I|L}T]N{[WN]|[YH]}SPNV;[{I|L}T]NS{[WN]|[YH]}PNV;[VG]AH[YT]SPNV;{[QV]|[N{I|L}]|[RA]|[KV]}EC(Carbamidomethyl (C))AKPNV;[QT]V{[WN]|[YH]}SPNV 6.0989;5.8702;5.7559;5.5924;5.1132;5.0397;4.8111;4.7281;4.698;4.6817 -;-;-;-;-;-;-;-;-;- 2030 1 2.384 120674.1 0.7400000095367432 1517 3905 5421 SUDHL4_400M_050219_1,5424 SUDHL4_400M_050219_1,5424,KAWENSPNV True True KAWENSPNV 27.661821 522.75889891386 2421308.5 5421.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 7.754056612650554 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5425 27.672 570.0 375610.0 25 0 35982.0 + 12245 GQYPTQPTY 9 159 527.7454617026201 1053.47637047204 2 527.7445556521416 MULTI CID FTMS 0 0 0 5421 162547.15625 0.002848006284506 -7 0.1446876525878906 4 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 85.64151623876279 0.0161498729896241 5 [TP]QYGQ 6 6 48.324 0.0 0.0 4.5871 0.0 0.0 0.0 376.1499780386748 376.1499780386748 7.640595913864772 0.0 0.0 0.0 0 0.5 1.2218487496163564 1.4489700043360187 0.5356668758921829 [TP]QYGQ 4.5871 - 2367 1 2.384 167996.0 1.0 1518 3905 5421 SUDHL4_400M_050219_1,5425 SUDHL4_400M_050219_1,5425,GQYPTQPTY True True GQYPTQPTY 27.671821 527.744555652142 1419814560.0 5421.0 nc|ENSG00000183283|Q15038-2|DAZAP2;;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;;nc|ENSG00000183283|Q15038-3|DAZAP2;;nc|ENSG00000183283|Q15038-6|DAZAP2;;ENSG00000183283|ENST00000412716|DAZAP2;;nc|ENSG00000183283|Q15038-4|DAZAP2;;nc|ENSG00000183283|Q15038-5|DAZAP2;;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;;ENST00000552173.5_1_12:51632691-51634513:+|nuORF 8.754142125447592 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5426 27.678 340.0 389600.0 25 0 26806.0 + 37429 TLDEKIEKV 9 145 358.8726290291526 0 358.8725463747978 PEAK CID FTMS 0 0 0 5421 158831.671875 0.7891955524680269 -2 0.0330715179443359 5 Unmodified _TLDEKIEKV_ ENSG00000124228|ENST00000618172|DDX27;ENST00000484427.5_1_20:47835892-47850293:+|nuORF;nc|ENSG00000124228|Q96GQ7|DDX27 31.635753872319068 0.1028371168583011 5 T 1 8 8.3718 0.0 0.0 1.1697 0.0 0.0 529.5935418944397 82.06691156558827 611.660453460028 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 + T 1.1697 + + 111 + 1 2.384 110936.8 1.0 1519 3905 5421 SUDHL4_400M_050219_1,5426 SUDHL4_400M_050219_1,5426,TLDEKIEKV True True TLDEKIEKV 27.677975 358.872546374798 2273275.375 5421.0 ENST00000484427.5_1_20:47835892-47850293:+|nuORF;;ENSG00000124228|ENST00000618172|DDX27;;nc|ENSG00000124228|Q96GQ7|DDX27 5.301632404327393 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5427 27.692 800.0 256910.0 25 0 44772.0 + 37428 TLDEKIEKV 9 156 537.8056954944077 1073.5968380556153 2 537.8054687380791 MULTI CID FTMS 0 0 0 5421 152137.015625 0.5199971054214069 -1 0.0064048767089843 6 Unmodified _TLDEKIEKV_ ENSG00000124228|ENST00000618172|DDX27;ENST00000484427.5_1_20:47835892-47850293:+|nuORF;nc|ENSG00000124228|Q96GQ7|DDX27 90.96430476242004 0.01459804021723 5 T{I|L}DEK{I|L}EKV 9 0 + 98.181 0.0 0.0 9.1451 9.1451 91.587 0.0 0.0 0.0 21.494405228332937 5.528419686577806 5.528419686577806 5.528419686577806 0 2.385151878060192 2.0 0.9947026752325154 0.2302046884880938 + + T{I|L}DEK{I|L}EKV;T{I|L}DEK{I|L}EVK;T{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RDPV;VTEEK{I|L}EKV;TVEEK{I|L}EKV;T{I|L}WW{I|L}EKV;VTEEK{I|L}EVK;TVEEK{I|L}EVK;VT{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RDPV;T{I|L}WW{I|L}EVK 9.1451;8.6302;7.264;7.088;6.6789;6.5762;6.573;6.1639;6.0682;6.0612 +;-;-;-;-;-;-;-;-;- + 6389 + 1 2.384 165189.1 0.6800000071525574 1520 3905 5421 SUDHL4_400M_050219_1,5427 SUDHL4_400M_050219_1,5427,TLDEKIEKV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5429 27.697 150.0 454360.0 25 0 56679.0 + 2134 APVPAPERK 9 69 482.78254716373465 963.5505413942692 2 482.7820617556572 MULTI CID FTMS 0 0 0 5428 406087.0 0.1500333161472383 -7 0.1652088165283203 1 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 32.30548876998284 0.1201446275138228 5 APAPV 5 -1 68.003 0.0 0.0 7.0576 0.0 0.0 0.0 525.279550479727 525.279550479727 39.40945934219002 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.0 0.0 APAPV 7.0576 - 94 + 1 2.384 56953.1 1.0 1521 3906 5428 SUDHL4_400M_050219_1,5429 SUDHL4_400M_050219_1,5429,APVPAPERK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5430 27.711 800.0 156210.0 25 0 14360.0 + 12731 GVMMLEELQ 9 142 525.2544763524819 1048.4943997717637 2 525.2546874880791 MULTI CID FTMS 0 0 0 5428 140558.109375 1.0 0 0.0 2 Unmodified _GVMMLEELQ_ REV__ENSG00000073614|ENST00000399788|KDM5A;REV__nc|ENSG00000073614|P29375-2|KDM5A 28.486842064014134 0.1687311288560894 5 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q 8 -1 + 45.495 0.0 0.0 4.3391 4.3391 78.947 0.0 0.0 0.0 31.999868935529747 12.526357068639612 12.526357068639612 3.0102999566398125 0 0.9247425010840048 0.0 0.0 0.6861818737241735 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{[DA]|[EG]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[QN]|[E{I|L}]|[KN]}[YT]PW{I|L}Q;{[CA]|SS}{I|L}{[DA]|[EG]}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]Q{I|L};[PG][NP][HT]DA{I|L}Q;{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]Q{I|L};{[CA]|SS}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[DN]{I|L}Q;{[QN]|[E{I|L}]|[KN]}[YT]P{I|L}WQ 4.3391;4.0519;3.4557;3.2891;3.1686;2.8287;2.6109;2.5416;2.5019;2.429 -;-;-;-;-;-;-;-;-;- 1314 + 1 2.384 100896.0 0.6200000047683716 1522 3906 5428 SUDHL4_400M_050219_1,5430 SUDHL4_400M_050219_1,5430,GVMMLEELQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5431 27.717 335.0 447110.0 25 0 109240.0 + 30983 RLDDNIRTV 9 129 551.3040918930617 1100.5936308529233 2 551.3045532107353 MULTI CID FTMS 0 0 0 5428 328417.625 1.0 0 0.0 3 Unmodified _RLDDNIRTV_ ENSG00000141252|ENST00000437048|VPS53;ENST00000575207.5_1_17:560762-617949:-|nuORF;nc|ENSG00000141252|Q5VIR6-1|VPS53;nc|ENSG00000141252|Q5VIR6-2|VPS53;nc|ENSG00000141252|Q5VIR6-3|VPS53 44.391923383255 0.0526658857881241 5 VG{I|L}DDV 6 6 68.933 0.0 0.0 6.2633 0.0 0.0 0.0 499.2650240533813 499.2650240533813 39.215946110458006 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.3807196863200844 0.0 VG{I|L}DDV 6.2633 - 411 + 1 2.384 117279.2 1.0 1523 3906 5428 SUDHL4_400M_050219_1,5431 SUDHL4_400M_050219_1,5431,RLDDNIRTV True True RLDDNIRTV 27.717164 551.304553210735 1615840.875 5428.0 nc|ENSG00000141252|Q5VIR6-2|VPS53;;ENSG00000141252|ENST00000437048|VPS53;;nc|ENSG00000141252|Q5VIR6-3|VPS53;;ENST00000575207.5_1_17:560762-617949:-|nuORF;;nc|ENSG00000141252|Q5VIR6-1|VPS53 7.457984447479248 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5432 27.722 282.0 250790.0 25 0 18568.0 + 13781 HSHVGYTL 8 96 457.2306572013281 912.4467614694562 2 457.2304565310478 MULTI CID FTMS 0 0 0 5428 118574.0546875 0.9564765541765076 -3 0.085235595703125 4 Unmodified _HSHVGYTL_ ENSG00000196684|ENST00000613986|HSH2D 30.22481116460888 0.4082965392918993 5 [HS]HRYT{I|L} 7 2 [HS]HRY + + 18.443 12.224 1.7968 2.0213 2.0213 52.939 0.0 0.0 0.0 0.0 0.9471212218917912 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 [HS]HRYT{I|L} 2.0213 - 93 + 1 2.384 60419.9 1.0 1524 3906 5428 SUDHL4_400M_050219_1,5432 SUDHL4_400M_050219_1,5432,HSHVGYTL False True HSHVGYTL 27.722344 457.230456531048 778868.5 5428.0 ENSG00000196684|ENST00000613986|HSH2D 5.001910448074341 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5433 27.736 800.0 127060.0 25 0 11540.0 -1 ECKECRKCFYQ 11 107 775.830047597972 1549.645542262744 2 775.8307983279228 MULTI CID FTMS 0 0 0 5428 139184.5625 0.6537418557589576 -5 0.1306686401367187 5 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 28.49450938151212 0.4231428536161201 5 [QA]HDEAGAQDA{M(Oxidation (M))|F}YQ 14 -1 + 105.15 0.0 0.0 6.7854 6.7854 83.113 0.0 0.0 0.0 3.427540532368994 91.65414204074791 3.427540532368994 0.6472532963665572 0 0.9247425010840048 0.0 1.1549471895720984 1.4489700043360187 [QA]HDEAGAQDA{M(Oxidation (M))|F}YQ;[QA]HDEAQQDA{M(Oxidation (M))|F}YQ;[QA]DHEAGAQDA{M(Oxidation (M))|F}YQ;[QA]HDEAGAENA{M(Oxidation (M))|F}YQ;[QA]DHEAQQDA{M(Oxidation (M))|F}YQ;[QA]HDEAGAEGGA{M(Oxidation (M))|F}YQ;[QA]HDEAQENA{M(Oxidation (M))|F}YQ;[QA]HDEAQEGGA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQDA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}YQ 6.7854;6.7436;6.6206;6.5911;6.5789;6.5718;6.5493;6.5286;6.4775;6.4357 -;-;-;-;-;-;-;-;-;- 14482 1 2.384 75774.0 0.6200000047683716 1525 3906 5428 SUDHL4_400M_050219_1,5433 SUDHL4_400M_050219_1,5433,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5435 27.745 301.0 222990.0 25 0 12251.0 12209 GQTGTKSVF 9 108 462.7430695795208 923.4715862258416 2 462.7425414919853 MULTI CID FTMS 0 0 0 5434 190336.296875 0.4522582985333515 6 -0.231109619140625 1 Unmodified _GQTGTKSVF_ ENSG00000004897|ENST00000066544|CDC27;ENST00000525495.6_2_17:45219385-45266538:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 18.1463463914782 0.3454829746528889 5 {[QG]|[NA]}T 3 6 21.228 0.0 0.0 2.2987 0.0 0.0 0.0 634.320773808126 634.320773808126 1.764319472944038 0.0 0.0 0.0 0 0.5 0.5528419686577808 0.0 0.3252574989159953 + {[QG]|[NA]}T 2.2987 + + 105 1 2.384 55047.4 1.0 1526 3907 5434 SUDHL4_400M_050219_1,5435 SUDHL4_400M_050219_1,5435,GQTGTKSVF False True KFKESFAEMNR 27.745093 462.742541491985 220622.65625 5434.0 ENST00000568339.5_1_16:85839106-85839475:+|nuORF;;ENSG00000131143|ENST00000253452|COX4I1;;ENST00000564648.1_1_16:85839106-85840477:+|nuORF 0.6552331248919169 3.0 False 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5436 27.755 551.0 308500.0 25 0 39333.0 -1 LLCCCNFY 8 125 546.7192714049193 1091.4239898766384 2 546.7197143435478 MULTI CID FTMS 0 0 0 5434 192160.75 0.0749140914236058 -4 0.129608154296875 2 2 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))C(Carbamidomethyl (C))CNFY_ ENST00000417811.2_3_7:32674948-32715621:-|nuORF 10.183394434864962 0.7604730176254005 5 YT 2 -1 25.217 0.0 0.0 2.3104 0.0 0.0 0.0 824.2907037370705 824.2907037370705 7.742275032520141 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YT 2.3104 - 103 + 1 2.384 134258.9 1.0 1527 3907 5434 SUDHL4_400M_050219_1,5436 SUDHL4_400M_050219_1,5436,LLCCCNFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5437 27.76 273.0 299950.0 25 0 24948.0 + -1 PEMKIIIRK 9 103 381.9013469324728 1142.6822113976184 3 381.9018737673759 MULTI CID FTMS 0 0 0 5434 188527.984375 0.611869924322763 2 -0.0539169311523437 3 Oxidation (M) _PEM(Oxidation (M))KIIIRK_ REV__ENSG00000126804|ENST00000683701|ZBTB1;REV__nc|ENSG00000126804|Q9Y2K1-2|ZBTB1 10.799506525563784 0.5443532743200366 5 K{I|L}K[EP]E 6 -1 24.922 0.0 0.0 2.181 0.0 0.0 400.2796803205094 0.0 400.2796803205094 0.0 12.931825014007217 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[EP]E 2.181 - 43 1 2.384 69480.1 1.0 1528 3907 5434 SUDHL4_400M_050219_1,5437 SUDHL4_400M_050219_1,5437,PEMKIIIRK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5438 27.769 550.0 317720.0 25 0 85866.0 25945 NLPCTYDPLQ 10 114 582.2754262025935 1162.536299471987 2 582.2755615115166 MULTI CID FTMS 0 0 0 5434 93961.171875 0.6382405259169478 -1 0.04437255859375 4 Unmodified _NLPCTYDPLQ_ ENSG00000155659|ENST00000374737|VSIG4;nc|ENSG00000155659|Q9Y279-2|VSIG4;nc|ENSG00000155659|Q9Y279-3|VSIG4 31.26834338654808 0.266153677697784 5 {M(Oxidation (M))|F}{I|L}Q 3 8 35.005 0.0 0.0 3.0111 0.0 0.0 756.3178578107437 0.0 756.3178578107437 0.0 17.838096733120278 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}Q 3.0111 - 243 1 2.384 134227.1 1.0 1529 3907 5434 SUDHL4_400M_050219_1,5438 SUDHL4_400M_050219_1,5438,NLPCTYDPLQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5440 27.774 99.0 600960.0 25 0 70167.0 11839 GLQEGTHEL 9 93 492.2434953195039 982.4724377058078 2 492.2436096072197 MULTI CID FTMS 0 0 0 5439 293916.90625 0.2975572589506597 4 -0.1602191925048828 1 Unmodified _GLQEGTHEL_ ENSG00000174780|ENST00000642900|SRP72;nc|ENSG00000174780|O76094-2|SRP72 16.942295170755138 0.3780752226737986 5 [{I|L}A]N 3 8 27.715 0.0 0.0 2.821 0.0 0.0 0.0 681.2847600537172 681.2847600537172 15.36384662471981 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]N 2.821 - 206 1 2.384 48632.1 1.0 1530 3908 5439 SUDHL4_400M_050219_1,5440 SUDHL4_400M_050219_1,5440,GLQEGTHEL False True ALPDQGIAKA 27.774033 492.24360960722 2311019.0 5439.0 ENSG00000089289|ENST00000356413|IGBP1 3.753084739049276 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5441 27.777 129.0 609890.0 25 0 122190.0 + 26240 NQKPPSAEF 9 92 509.2537406081808 1016.4929282831616 2 509.2539855837822 MULTI CID FTMS 0 0 0 5439 307262.0 0.850857704106578 2 -0.0463848114013671 2 Unmodified _NQKPPSAEF_ ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST 18.1463463914782 0.3454829746528889 5 HK[HS] 4 7 16.95 0.0 0.0 1.6675 0.0 0.0 509.2462025373063 0.0 509.2462025373063 0.0 1.4659125070036083 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 HK[HS] 1.6675 - 66 1 2.384 68464.2 1.0 1531 3908 5439 SUDHL4_400M_050219_1,5441 SUDHL4_400M_050219_1,5441,NQKPPSAEF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5442 27.782 261.0 403280.0 25 0 66190.0 + 31996 RVIAIRPIR 9 118 365.2486598874564 1092.7241502625693 3 365.2486450076103 MULTI CID FTMS 0 0 0 5439 235720.59375 0.9054628766125318 -2 0.0774993896484375 3 Unmodified _RVIAIRPIR_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 33.4449034751529 0.1114409586740657 5 RV 2 7 23.098 0.0 0.0 2.1138 0.0 0.0 0.0 834.5331308972064 834.5331308972064 5.16601667569989 0.0 0.0 0.0 0 0.5138793319624578 0.0 0.0 0.0 + RV 2.1138 + + 32 + 1 2.384 90266.1 1.0 1532 3908 5439 SUDHL4_400M_050219_1,5442 SUDHL4_400M_050219_1,5442,RVIAIRPIR True True RVIAIRPIR 27.781501 365.24864500761 1054508.5 5439.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 0.7988126675287882 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5443 27.787 313.0 452280.0 25 0 75342.0 -1 0 105 380.18142871665896 379.17415225005897 1 380.1806518435478 MULTI CID FTMS 0 0 0 5439 153277.828125 0.1679466449845732 -4 0.1360683441162109 4 5 PTY 3 -1 + 56.911 0.0 0.0 15.009 15.009 97.351 0.0 0.0 0.0 12.16190326687972 12.16190326687972 12.16190326687972 12.16190326687972 0 0.5 1.6989700043360187 0.3494850021680094 0.0 PTY;[TP]Y;YTP;[YT]P;[DV]{M(Oxidation (M))|F} 15.009;11.802;8.7757;7.406;2.0848 -;-;-;-;- 26 + 1 2.384 123577.1 1.0 1533 3908 5439 SUDHL4_400M_050219_1,5443 SUDHL4_400M_050219_1,5443, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5444 27.79 159.0 474400.0 25 0 45347.0 -1 0 98 539.2371889060739 538.2299124394739 1 539.2380859255791 MULTI CID FTMS 0 0 0 5439 148110.984375 0.1245835780992677 -3 0.1296634674072265 5 5 Y 1 -1 14.292 0.0 0.0 2.6553 0.0 0.0 357.1552644675973 0.0 357.1552644675973 0.0 2.9875002310496512 0.0 0.0 0 0.2302046884880938 0.0 0.0 0.0 Y 2.6553 - 49 + 1 2.384 60826.4 1.0 1534 3908 5439 SUDHL4_400M_050219_1,5444 SUDHL4_400M_050219_1,5444, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5446 27.8 431.0 185060.0 25 0 36915.0 + 31326 RMKVTNEDF 9 106 570.279297125472 1138.544041317744 2 570.2795287966728 MULTI CID FTMS 0 0 0 5445 120787.0078125 0.856802867814144 -1 0.0207901000976562 1 Unmodified _RMKVTNEDF_ ENSG00000100764|ENST00000261303|PSMC1;ENST00000555787.1_1_14:90736495-90738748:+|nuORF;nc|ENSG00000100764|P62191-2|PSMC1 45.69961567697781 0.0497987121815769 5 TNED{M(Oxidation (M))|F} 5 4 48.787 0.0 0.0 4.285 0.0 0.0 514.3068104474625 0.0 514.3068104474625 0.0 35.291681396006 0.0 0.0 0 0.9247425010840048 0.0 0.3252574989159953 0.7614393726401688 + TNED{M(Oxidation (M))|F} 4.285 + + 173 1 2.384 61289.3 1.0 1535 3909 5445 SUDHL4_400M_050219_1,5446 SUDHL4_400M_050219_1,5446,RMKVTNEDF True True RMKVTNEDF 27.800258 570.279528796673 929621.4375 5445.0 ENSG00000100764|ENST00000261303|PSMC1;;nc|ENSG00000100764|P62191-2|PSMC1;;ENST00000555787.1_1_14:90736495-90738748:+|nuORF 6.662761052449544 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5447 27.803 129.0 701550.0 25 0 114240.0 27826 PLPWQQRSL 9 93 375.5436194035469 1123.6090288108408 3 375.5435363650322 MULTI CID FTMS 0 0 0 5445 311230.53125 0.0945384224005528 -4 0.1504535675048828 2 Unmodified _PLPWQQRSL_ ENST00000448404.5_1_11:64532928-64535069:-|nuORF;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-5|SF1 22.65808497894818 0.2428932432760099 5 [{M(Oxidation (M))|F}V]K[Y{I|L}]W[VG]{I|L} 9 8 + 42.61 0.0 0.0 3.7922 3.7922 80.957 0.0 0.0 0.0 27.1252997059802 1.86445264765851 1.86445264765851 6.706962271689747 0 0.4247425010840047 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]K[Y{I|L}]W[VG]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}GV[Y{I|L}]W[VG]{I|L} 3.7922;3.1953 -;- 109 + 1 2.384 77277.3 1.0 1536 3909 5445 SUDHL4_400M_050219_1,5447 SUDHL4_400M_050219_1,5447,PLPWQQRSL False False False False non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_1 5448 27.806 140.0 593850.0 25 0 53859.0 + 12239 GQYCLCRFS 9 108 538.7364000871084 0 538.7364990115166 PEAK CID FTMS 0 0 0 5445 352173.96875 0.2250079624332876 -2 0.0539169311523437 3 Unmodified _GQYCLCRFS_ REV__ENSG00000049323|ENST00000404816|LTBP1;REV__nc|ENSG00000049323|Q14766-2|LTBP1;REV__nc|ENSG00000049323|Q14766-3|LTBP1;REV__nc|ENSG00000049323|Q14766-4|LTBP1;REV__nc|ENSG00000049323|Q14766-5|LTBP1 24.020572477871973 0.1646235280836931 5 YPTQ 4 -1 19.997 0.0 0.0 1.8594 0.0 0.0 185.0778863773424 398.13437830142817 583.2122646787706 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.6694451763165201 0.0 YPTQ 1.8594 - 177 + 1 2.384 66872.7 1.0 1537 3909 5445 SUDHL4_400M_050219_1,5448 SUDHL4_400M_050219_1,5448,GQYCLCRFS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5449 27.816 588.0 271270.0 25 0 77974.0 + 31460 RPRGPEGVGSL 11 106 562.8121250347717 1123.6096971363434 2 562.8119384646416 MULTI CID FTMS 0 0 0 5445 195976.328125 0.1168956130293809 -5 0.1568584442138672 4 Unmodified _RPRGPEGVGSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 59.49591170135616 0.071190994960647 5 [VG]PRG[EP]RGS{I|L} 11 4 + 56.805 0.0 0.0 5.0556 5.0556 83.553 0.0 0.0 0.0 25.457221718337056 11.021720190485716 11.021720190485716 5.356216463058274 0 2.555462187404089 0.8538719643217619 0.3494850021680094 0.0 [VG]PRG[EP]RGS{I|L};RPRG[EP]GVGS{I|L};RP[VG]G[EP]RGS{I|L};RPRG{I|L}YYS{I|L};[RP]RG[EP]G{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[RP]RG[EP]K[DG]{I|L};[RP]R[WP]G{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[RP]R[WP]{[WN]|[YH]}{I|L} 5.0556;4.5789;4.2957;4.1014;3.5686;3.3727;3.2705;2.5839 -;+;-;-;-;-;-;- + 470 + 1 2.384 127481.1 1.0 1538 3909 5445 SUDHL4_400M_050219_1,5449 SUDHL4_400M_050219_1,5449,RPRGPEGVGSL True True RPRGPEGVGSL 27.816014 562.811938464642 47030668.0 5445.0 ENST00000523767.5_1_5:149877380-149900454:+|nuORF 8.031301021575928 2.0 True 11.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5451 27.833 800.0 111930.0 25 0 9951.4 + 8943 FAMNDESVFY 10 105 611.7599341182291 1221.5053153032582 2 612.2610961794853 MULTI CID FTMS 0 0 0 5450 48011.32421875 0.2223651297638108 -2 0.0463848114013671 1 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 10.823927491677226 0.6659270209832991 5 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 51.274 0.0 0.0 4.1976 4.1976 83.817 0.0 0.0 0.0 7.269987279362624 35.78904517738646 7.269987279362624 9.164539485499256 0 0.8182503180159344 0.0 0.3054621874040891 0.805462187404089 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD][DV]NQNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD][DV]GGQNA{M(Oxidation (M))|F}Y;[HD][DV]N[AG]NA{M(Oxidation (M))|F}Y 4.1976;3.4473;3.4473;3.4473;2.8196;2.7;2.7;2.7;2.0693;2.0693 -;-;-;-;-;-;-;-;-;- 645 1 2.361 70661.8 0.5699999928474426 1539 3910 5450 SUDHL4_400M_050219_1,5451 SUDHL4_400M_050219_1,5451,FAMNDESVFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5452 27.836 100.0 856410.0 25 0 114430.0 + 29235 QGTYAHVS 8 97 431.7061674294811 861.3977819257623 2 431.7063171267509 MULTI CID FTMS 0 0 0 5450 533746.0 1.0 0 0.0 2 Unmodified _QGTYAHVS_ REV__ENSG00000099812|ENST00000215582|MISP 23.1484247019978 0.5573009939494978 5 {[QG]|[NA]}T 3 -1 25.083 0.0 0.0 2.9119 0.0 0.0 0.0 572.2462370861716 572.2462370861716 9.598849321875331 0.0 0.0 0.0 0 0.5 0.6777807052660807 0.2614393726401688 0.5629529932484498 {[QG]|[NA]}T 2.9119 + + 250 1 2.361 73360.8 1.0 1540 3910 5450 SUDHL4_400M_050219_1,5452 SUDHL4_400M_050219_1,5452,QGTYAHVS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5453 27.849 800.0 250910.0 25 0 17379.0 29188 QGDYDDTMY 9 187 554.2025088642085 1106.390464795217 2 554.2017089724541 MULTI CID FTMS 0 0 0 5450 191081.21875 0.4891362239726866 -2 0.0463848114013671 3 Unmodified _QGDYDDTMY_ ENST00000560385.2_1_15:79528799-79529129:+|nuORF 10.823927491677226 0.5436922275383211 5 {I|L}QY 3 8 21.427 0.0 0.0 1.9366 0.0 0.0 684.1964027975667 0.0 684.1964027975667 0.0 5.823872065994557 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}QY 1.9366 - 412 1 2.361 151367.2 0.7799999713897705 1541 3910 5450 SUDHL4_400M_050219_1,5453 SUDHL4_400M_050219_1,5453,QGDYDDTMY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5454 27.863 800.0 106300.0 25 0 16766.0 -1 EMYKQWCMAM 10 101 684.7576790983509 1367.5008052635017 2 684.7573119997978 MULTI CID FTMS 0 0 0 5450 122229.6640625 1.0 0 0.0 4 3 Oxidation (M) _EM(Oxidation (M))YKQWCM(Oxidation (M))AM(Oxidation (M))_ ENSG00000111269|ENST00000228865|CREBL2 3.5964929083625545 0.7100006075494749 5 DQ{[DS]|[MA]|[CV]|TT}[MN]YEE 9 -1 18.663 0.0 0.0 1.3647 0.0 0.0 238.1421833722672 0.0 238.1421833722672 0.0 13.17795922477814 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.7742275032520141 DQ{[DS]|[MA]|[CV]|TT}[MN]YEE 1.3647 - 125 1 2.361 66762.2 0.6399999856948853 1542 3910 5450 SUDHL4_400M_050219_1,5454 SUDHL4_400M_050219_1,5454,EMYKQWCMAM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5455 27.872 525.0 307100.0 25 0 43918.0 + 31346 RMSDVVKGV 9 122 495.7720710107025 989.5295890882052 2 495.7738525271416 MULTI CID FTMS 0 0 0 5450 103277.46875 0.4111607162296239 -2 0.0463848114013671 5 Unmodified _RMSDVVKGV_ ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-5|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4 29.84058131909904 0.1515068451768857 5 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))E]|[WC]}VVKGV 9 4 + 57.048 0.0 0.0 5.7652 5.7652 83.606 0.0 0.0 0.0 3.232393644498657 10.72559982972642 3.232393644498657 3.232393644498657 0 1.25 1.2218487496163564 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))E]|[WC]}VVKGV;[VG]G[{M(Oxidation (M))|F}E]VVKGV;[VG][R{M(Oxidation (M))|F}]EVKGV;[VG]G[{M(Oxidation (M))|F}V]EVKGV;{[QS]|[NT]}HHVVKGV;[VG]{NN|[MP]|[D{I|L}]|[EV]}{[CT]|[{M(Oxidation (M))|F}G]}VKGV;V[KC]EEVKGV;{[TV]|[{I|L}S]}[PS]{[CT]|[{M(Oxidation (M))|F}G]}VKGV;{[NV]|[RG]}[{M(Oxidation (M))|F}E]VVKGV;[KG]{[YC]|[HE]}HVKGV 5.7652;5.4385;5.0826;4.6903;4.6104;4.4181;4.3583;4.3524;4.2644;3.6978 -;-;-;-;-;-;-;-;-;- 551 1 2.361 125318.1 1.0 1543 3910 5450 SUDHL4_400M_050219_1,5455 SUDHL4_400M_050219_1,5455,RMSDVVKGV False True RMSDVVKGV 27.872422 495.773852527142 2614390.25 5450.0 nc|ENSG00000161813|Q71RC2-4|LARP4;;nc|ENSG00000161813|Q71RC2-3|LARP4;;nc|ENSG00000161813|Q71RC2-2|LARP4;;nc|ENSG00000161813|Q71RC2-5|LARP4;;nc|ENSG00000161813|Q71RC2-6|LARP4;;ENSG00000161813|ENST00000398473|LARP4 6.31432310740153 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5457 27.877 24.0 1983700.0 25 0 112250.0 -1 ETEGPDMKEK 10 72 590.266171126569 1178.517789319938 2 590.2664672732353 MULTI CID FTMS 0 0 0 5456 2148724.5 0.5616531605830205 2 -0.0953216552734375 1 Oxidation (M) _ETEGPDM(Oxidation (M))KEK_ ENSG00000278685|ENST00000615129|IQCA1L 17.11289562659939 0.5604042439455784 5 HVDAAEK 7 -1 64.501 0.0 0.0 5.473 0.0 0.0 410.140063018796 0.0 410.140063018796 0.0 59.139136899135366 0.0 0.0 0 2.3494850021680094 0.0 0.3494850021680094 0.3054621874040891 HVDAAEK 5.473 - 137 + 1 2.361 43575.9 1.0 1544 3911 5456 SUDHL4_400M_050219_1,5457 SUDHL4_400M_050219_1,5457,ETEGPDMKEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5458 27.878 56.0 869740.0 25 0 100330.0 10871 GAEVELSAPV 10 85 486.255198508216 970.495844083232 2 486.2549011111259 MULTI CID FTMS 0 0 0 5456 1064955.75 0.9688977715790004 3 -0.1576423645019531 2 Unmodified _GAEVELSAPV_ ENSG00000169169|ENST00000598293|CPT1C;ENST00000295404.9_1_19:50194996-50204826:+|nuORF;ENST00000599023.5_1_19:50195509-50213852:+|nuORF;ENST00000600944.5_1_19:50195509-50200723:+|nuORF;nc|ENSG00000169169|Q8TCG5-2|CPT1C;nc|ENSG00000169169|Q8TCG5-3|CPT1C 26.88365393820708 0.3646707531412818 5 [{I|L}T][C(Carbamidomethyl (C))H]Q 5 9 27.517 0.0 0.0 2.8353 0.0 0.0 0.0 328.1835021245009 328.1835021245009 8.770825783568192 0.0 0.0 0.0 0 0.5 2.0 0.75 0.0 [{I|L}T][C(Carbamidomethyl (C))H]Q 2.8353 - 125 1 2.361 44184.4 1.0 1545 3911 5456 SUDHL4_400M_050219_1,5458 SUDHL4_400M_050219_1,5458,GAEVELSAPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5459 27.892 800.0 130270.0 25 0 6280.7 -1 LINNCSEFY 9 124 580.2597392748239 1158.5049256164475 2 580.2596313357353 MULTI CID FTMS 0 0 0 5456 136631.03125 0.7093608295326391 -3 0.1026611328125 3 Carbamidomethyl (C) _LINNC(Carbamidomethyl (C))SEFY_ CON__Q32PI4 12.531546534597751 0.4974689918368763 5 {I|L}{I|L}EPPSG 7 -1 43.933 0.0 0.0 3.7922 0.0 0.0 0.0 462.1122225397094 462.1122225397094 30.437682432062445 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}EPPSG 3.7922 - 168 + 1 2.361 84165.9 0.6899999976158142 1546 3911 5456 SUDHL4_400M_050219_1,5459 SUDHL4_400M_050219_1,5459,LINNCSEFY False False False False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 5460 27.893 63.0 1379900.0 25 0 297310.0 16191 IVICRDCTTSA 11 80 394.52679486390207 1180.5585551919062 3 394.5264465212822 MULTI CID FTMS 0 0 0 5456 499309.46875 0.8557870149680618 -1 0.0562763214111328 4 Unmodified _IVICRDCTTSA_ ENST00000420757.1_1_1:240799967-240800270:-|nuORF 9.38312468134398 0.8308777417566128 5 SYSYK[R{M(Oxidation (M))|F}] 7 11 42.479 0.0 0.0 3.5982 0.0 0.0 231.08986333706667 0.0 231.08986333706667 0.0 35.48918221526151 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3494850021680094 SYSYK[R{M(Oxidation (M))|F}] 3.5982 - 124 + 1 2.361 73737.0 1.0 1547 3911 5456 SUDHL4_400M_050219_1,5460 SUDHL4_400M_050219_1,5460,IVICRDCTTSA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5461 27.907 800.0 265730.0 25 0 54995.0 -1 0 63 1188.8175987090676 3563.430966727403 3 1189.485278308392 MULTI CID FTMS 0 0 0 5456 391259.84375 0.4798421910790842 -3 0.1026611328125 5 5 E 1 -1 6.9897 0.0 0.0 0.19615 0.0 0.0 2907.200897073292 524.1634506122126 3431.3643476855045 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19615 - 32 + 1 2.361 165964.8 0.9399999976158142 1548 3911 5456 SUDHL4_400M_050219_1,5461 SUDHL4_400M_050219_1,5461, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5462 27.912 229.0 164990.0 25 0 8934.3 1165 AHDEVAPFAL 10 76 535.2671910889866 1068.519829244773 2 535.2668945193291 MULTI CID FTMS 0 0 0 5456 231600.140625 0.0111118215423832 25 -0.6326313018798828 6 Unmodified _AHDEVAPFAL_ ENST00000443339.5_1_3:9471730-9475758:+|nuORF 20.453626601364224 0.5043500229302764 5 QDT[WK]A{I|L} 7 7 41.876 0.0 0.0 3.9191 0.0 0.0 208.08679809418555 0.0 208.08679809418555 0.0 28.77742779154877 0.0 0.0 0 1.805462187404089 0.0 0.0 0.2887254899964357 QDT[WK]A{I|L} 3.9191 - 48 + 1 2.361 35405.7 1.0 1549 3911 5456 SUDHL4_400M_050219_1,5462 SUDHL4_400M_050219_1,5462,AHDEVAPFAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5463 27.916 242.0 207680.0 25 0 26468.0 + 15860 ISNPPGSNL 9 90 449.734528634532 897.454504335864 2 449.7344238162041 MULTI CID FTMS 0 0 0 5456 189910.078125 1.0 0 0.0 7 Unmodified _ISNPPGSNL_ ENSG00000060237|ENST00000315939|WNK1;ENST00000540885.1_1_12:1016996-1017955:+|nuORF;nc|ENSG00000060237|Q9H4A3-2|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1;nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1 36.12702656103203 0.0967173616627612 5 {[TV]|[{I|L}S]}N 3 6 27.11 0.0 0.0 3.0207 0.0 0.0 0.0 580.2711601798671 580.2711601798671 10.044835218721207 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.5709991640913001 0.0 + {[TV]|[{I|L}S]}N 3.0207 + + 66 1 2.361 42313.3 1.0 1550 3911 5456 SUDHL4_400M_050219_1,5463 SUDHL4_400M_050219_1,5463,ISNPPGSNL True True ISNPPGSNL 27.916182 449.734423816204 1950820.25 5456.0 nc|ENSG00000060237|Q9H4A3-6|WNK1;;nc|ENSG00000060237|Q9H4A3-4|WNK1;;nc|ENSG00000060237|Q9H4A3-5|WNK1;;nc|ENSG00000060237|Q9H4A3-7|WNK1;;ENSG00000060237|ENST00000315939|WNK1;;nc|ENSG00000060237|Q9H4A3-2|WNK1;;ENST00000540885.1_1_12:1016996-1017955:+|nuORF 5.449817975362142 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5464 27.93 800.0 99685.0 25 0 17879.0 + 38059 TPGAYMMPSPF 11 107 599.7665735342872 1197.5185941353743 2 599.7652465701103 MULTI CID FTMS 0 0 0 5456 90755.1640625 1.0 0 0.0 8 Unmodified _TPGAYMMPSPF_ REV__ENSG00000138801|ENST00000265174|PAPSS1 13.042465956692816 0.7638483625850725 5 [TP]QY{M(Oxidation (M))|F} 5 -1 41.184 0.0 0.0 3.4391 0.0 0.0 0.0 558.2411032508618 558.2411032508618 20.28151250383644 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.024227503252014 0.0 [TP]QY{M(Oxidation (M))|F} 3.4391 - 378 1 2.361 63360.8 0.6200000047683716 1551 3911 5456 SUDHL4_400M_050219_1,5464 SUDHL4_400M_050219_1,5464,TPGAYMMPSPF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5466 27.934 1.1 39936000.0 25 0 4928800.0 + 12246 GQYPTQPTY 9 73 527.7454617026201 1053.47637047204 2 527.7461425662041 MULTI CID FTMS 0 0 0 5465 57074016.0 1.0 0 0.0 1 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 32.30548876998284 0.1201446275138228 5 [TP]QY 4 5 36.867 0.0 0.0 3.4995 0.0 0.0 0.0 561.2284702484899 561.2284702484899 13.60924374808178 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.066901560044258 0.0 [TP]QY 3.4995 - 170 1 2.344 42040.3 1.0 1552 3912 5465 SUDHL4_400M_050219_1,5466 SUDHL4_400M_050219_1,5466,GQYPTQPTY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5467 27.935 24.0 1514500.0 25 0 222710.0 + 31144 RLPDDDPTAV 10 61 549.7749447285977 1097.5353365239953 2 549.7748901247978 MULTI CID FTMS 0 0 0 5465 2481508.5 0.8969354569227123 -1 0.0575580596923828 2 Unmodified _RLPDDDPTAV_ ENSG00000158623|ENST00000425248|COPG2 39.92294525591503 0.1583807461695373 5 [R{I|L}][DP]DDPTAV 10 0 + 57.638 0.0 0.0 5.2516 5.2516 91.209 0.0 0.0 0.0 2.7545373444029053 41.18440000316717 2.7545373444029053 29.192066049390203 0 1.0 0.0 0.8252574989159953 0.0 + + [R{I|L}][DP]DDPTAV;{[ES]|[DT]|[{I|L}C]}{[RE]|[WV]}D[RH]AV;[R{I|L}][DP]DDPG[{I|L}T];[R{I|L}][DP]DD{[VA]|[{I|L}G]}[TP] 5.2516;2.5918;2.4507;1.2752 +;-;-;- + 59 1 2.344 36250.5 1.0 1553 3912 5465 SUDHL4_400M_050219_1,5467 SUDHL4_400M_050219_1,5467,RLPDDDPTAV False True RLPDDDPTAV 27.93543 549.774890124798 78172788.0 5465.0 ENSG00000158623|ENST00000425248|COPG2 8.460996309916178 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5468 27.94 248.0 231150.0 25 0 24188.0 8636 EVEEDEYKAFY 11 84 711.3077748010962 1420.6009966689924 2 711.3085204958916 MULTI CID FTMS 0 0 0 5465 376937.71875 0.5256043509661537 -2 0.1138343811035156 3 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 5 [QA]HDEAQQGGA{M(Oxidation (M))|F}Y 13 9 + 81.676 0.0 0.0 5.7494 5.7494 83.641 0.0 0.0 0.0 7.003280781317244 49.90574492211593 7.003280781317244 3.322646798160548 0 0.8935078169319297 0.0 0.3494850021680094 1.4802046884880935 [QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQNAGA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QGGA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]GGA{M(Oxidation (M))|F}Y;[QA]HDEAQQGQ{M(Oxidation (M))|F}Y;[QA]HDEAQGGAGA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]NAGA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QNA{M(Oxidation (M))|F}Y 5.7494;5.5155;5.4937;5.2598;5.1108;5.1108;4.9828;4.8769;4.8769;4.8533 -;-;-;-;-;-;-;-;-;- 1310 1 2.344 46209.9 1.0 1554 3912 5465 SUDHL4_400M_050219_1,5468 SUDHL4_400M_050219_1,5468,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5469 27.954 800.0 120410.0 25 0 6184.4 + -1 SRPDSILGMQF 11 119 633.8110147896538 1265.6074766461074 2 633.8105956912041 MULTI CID FTMS 0 0 0 5465 182044.40625 0.0357329706699946 9 -0.3482379913330078 4 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 26.268140514670165 0.4754186812857754 5 [AG]{I|L}KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 11 -1 + 63.0 0.0 0.0 4.9778 4.9778 78.837 0.0 0.0 0.0 6.3977424008370605 3.2653887055001363 3.2653887055001363 1.3387050642617382 0 1.048455006504028 1.3979400086720375 0.3807196863200844 1.1989700043360187 [AG]{I|L}KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 4.9778;4.8721;4.4723;4.2566;4.2566;4.1772;4.1508;4.1508;3.7482;3.7482 -;-;-;-;-;-;-;-;-;- 1387 1 2.344 76473.2 0.9200000166893004 1555 3912 5465 SUDHL4_400M_050219_1,5469 SUDHL4_400M_050219_1,5469,SRPDSILGMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5470 27.968 800.0 141190.0 25 0 12998.0 + 23963 LVSEYQQYQD 10 145 636.790632180094 1271.566711426988 2 636.7893554568291 MULTI CID FTMS 0 0 0 5465 153724.15625 0.866573588297951 -1 0.0575580596923828 5 Unmodified _LVSEYQQYQD_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000290377.9_1_9:141071128-141071713:+|nuORF;ENST00000402141.1_1_6:143757385-143757844:+|nuORF;ENST00000415481.1_1_1:809210-809726:+|nuORF;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000427668.1_1_1:53461605-53461695:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3 106.94017166704064 0.0046191154308253 5 [AG]YQDT{I|L}VY{[QD]|[EN]|[WG]|[KD]|[RS]} 11 8 + 62.419 0.0 0.0 4.9088 4.9088 82.128 0.0 0.0 0.0 4.272705138284763 5.862435673934272 4.272705138284763 4.272705138284763 0 1.0994850021680094 1.6989700043360187 0.5941876774005248 1.7302046884880935 [AG]YQDT{I|L}VY{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}V]SEYQQY{[QD]|[EN]|[WG]|[KD]|[RS]};[AG]QYDT{I|L}VY{[QD]|[EN]|[WG]|[KD]|[RS]};[AG]Y{[ES]|[DT]|[{I|L}C]}Q{I|L}VY{[QD]|[EN]|[WG]|[KD]|[RS]};[AG]YQ[KA]TQY{[QD]|[EN]|[WG]|[KD]|[RS]};[YQ]QDT{I|L}VY{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}V]SEHA[NP]Y{[QD]|[EN]|[WG]|[KD]|[RS]};{[ES]|[DT]|[{I|L}C]}YQQ{I|L}VY{[QD]|[EN]|[WG]|[KD]|[RS]};[AG]Y{[ES]|[DT]|[{I|L}C]}[{I|L}V]QY{[QD]|[EN]|[WG]|[KD]|[RS]};[AG]D[YT]Q{I|L}VY{[QD]|[EN]|[WG]|[KD]|[RS]} 4.9088;4.5728;4.3952;4.2618;4.1063;4.0977;4.0767;3.9396;3.9003;3.8866 -;+;-;-;-;-;-;-;-;- + 2351 1 2.344 86084.2 0.8700000047683716 1556 3912 5465 SUDHL4_400M_050219_1,5470 SUDHL4_400M_050219_1,5470,LVSEYQQYQD True True LVSEYQQYQD 27.967725 636.789355456829 1122923.5 5465.0 ENSG00000261456|ENST00000568584|TUBB8;;ENSG00000137267|ENST00000333628|TUBB2A;;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;;ENSG00000104833|ENST00000264071|TUBB4A;;ENSG00000196230|ENST00000327892|TUBB;;ENST00000427668.1_1_1:53461605-53461695:+|nuORF;;nc|ENSG00000258947|Q13509-2|TUBB3;;ENST00000415481.1_1_1:809210-809726:+|nuORF;;ENSG00000176014|ENST00000317702|TUBB6;;ENSG00000258947|ENST00000315491|TUBB3;;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;;ENSG00000137285|ENST00000259818|TUBB2B;;ENSG00000188229|ENST00000340384|TUBB4B;;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;;ENST00000402141.1_1_6:143757385-143757844:+|nuORF;;ENSG00000173213|ENST00000308911|TUBB8B;;ENST00000290377.9_1_9:141071128-141071713:+|nuORF 7.25041135152181 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5472 27.972 24.0 2349000.0 25 0 297980.0 + 2135 APVPAPERK 9 52 482.78254716373465 963.5505413942692 2 482.7822448611259 MULTI CID FTMS 0 0 0 5471 2706645.5 1.0 0 0.0 1 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 32.30548876998284 0.1201446275138228 5 APAPV 5 -1 73.003 0.0 0.0 7.5765 0.0 0.0 0.0 525.2805252781266 525.2805252781266 43.96205332875283 0.0 0.0 0.0 0 1.805462187404089 1.6989700043360187 0.0 0.0 APAPV 7.5765 - 66 + 1 2.344 47966.5 1.0 1557 3913 5471 SUDHL4_400M_050219_1,5472 SUDHL4_400M_050219_1,5472,APVPAPERK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5473 27.986 800.0 93079.0 25 0 9877.5 -1 0 72 1114.957934558392 0 1114.957934558392 PEAK CID FTMS 0 0 0 -1 0 2 5 GN 2 -1 7.9588 0.0 0.0 0.35723 0.0 0.0 1321.5741810290904 732.2348726861936 2053.809053715284 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GN 0.35723 - 62 + 1 2.344 55635.7 0.5199999809265137 1558 3913 5471 SUDHL4_400M_050219_1,5473 SUDHL4_400M_050219_1,5473, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5474 27.988 121.0 599430.0 25 0 42812.0 + 31131 RLMNETTAV 9 102 517.7683418168942 1033.5221307005884 2 517.7682983279228 MULTI CID FTMS 0 0 0 5471 559597.375 0.729476611763387 -1 0.0377635955810546 3 Unmodified _RLMNETTAV_ ENSG00000164070|ENST00000296464|HSPA4L;ENSG00000170606|ENST00000304858|HSPA4 38.17557092003332 0.0854718145212029 5 [R{I|L}]MNETTAV 9 0 + 60.301 0.0 0.0 5.8345 5.8345 83.452 0.0 0.0 0.0 4.762036441594191 41.87262348120272 4.762036441594191 3.0102999566398125 0 1.0 0.0 1.0 0.0 + + [R{I|L}]MNETTAV;[R{I|L}]MNTETAV;[TA][WR]ETTAV;[R{I|L}]MNTTEAV;[R{I|L}]MGGETTAV;[TA][WR]TETAV;[R{I|L}]MGGTETAV;[TP]YR[QA]EAV;[TA][WR]TTEAV;[R{I|L}]MGGTTEAV 5.8345;5.5432;5.1063;5.0594;4.9435;4.815;4.6523;4.5204;4.3313;4.1685 +;-;-;-;-;-;-;-;-;- + 679 1 2.344 61900.2 1.0 1559 3913 5471 SUDHL4_400M_050219_1,5474 SUDHL4_400M_050219_1,5474,RLMNETTAV True True RLMNETTAV 27.988396 517.768298327923 3798820.5 5471.0 ENSG00000164070|ENST00000296464|HSPA4L;;ENSG00000170606|ENST00000304858|HSPA4 6.194668451944987 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5475 28.002 800.0 308730.0 25 0 50642.0 + 14849 ILGPKPQGV 9 182 454.7818686388114 907.5491843444228 2 454.7816650271416 MULTI CID FTMS 0 0 0 5471 250660.9375 0.8485177187835735 1 -0.0623207092285156 4 Unmodified _ILGPKPQGV_ ENSG00000164073|ENST00000641686|MFSD8 50.855029805455786 0.0384952370514206 5 {I|L}{I|L}GPKSS 7 4 65.028 0.0 0.0 7.1653 0.0 0.0 0.0 222.1256502740844 222.1256502740844 53.43449480898549 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.3252574989159953 {I|L}{I|L}GPKSS 7.1653 - 501 + 1 2.344 191318.0 0.9800000190734864 1560 3913 5471 SUDHL4_400M_050219_1,5475 SUDHL4_400M_050219_1,5475,ILGPKPQGV True True ILGPKPQGV 28.002211 454.781665027142 1471292.75 5471.0 ENSG00000164073|ENST00000641686|MFSD8 5.386783440907796 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5476 28.016 800.0 228960.0 25 0 41607.0 + 10245 FQQSVQEY 8 184 514.7379551298284 1027.461357326457 2 514.7383911013603 MULTI CID FTMS 0 0 0 5471 129179.6328125 1.0 0 0.0 5 Unmodified _FQQSVQEY_ ENSG00000006744|ENST00000338034|ELAC2;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;nc|ENSG00000006744|Q9BQ52-2|ELAC2;nc|ENSG00000006744|Q9BQ52-3|ELAC2;nc|ENSG00000006744|Q9BQ52-4|ELAC2 28.486842064014134 0.4448922141344407 5 [AG]{M(Oxidation (M))|F}QSV 6 6 25.034 0.0 0.0 2.4365 0.0 0.0 0.0 435.1482219106942 435.1482219106942 6.160575871906982 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.8252574989159953 0.3494850021680094 [AG]{M(Oxidation (M))|F}QSV 2.4365 - 608 1 2.344 139498.0 0.7699999809265137 1561 3913 5471 SUDHL4_400M_050219_1,5476 SUDHL4_400M_050219_1,5476,FQQSVQEY False True FQQSVQEY 28.016052 514.73839110136 559546.0625 5471.0 ENST00000484122.5_1_17:12899737-12920449:-|nuORF;;nc|ENSG00000006744|Q9BQ52-4|ELAC2;;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;;nc|ENSG00000006744|Q9BQ52-3|ELAC2;;ENSG00000006744|ENST00000338034|ELAC2;;nc|ENSG00000006744|Q9BQ52-2|ELAC2 2.006999254226685 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5477 28.03 800.0 146470.0 25 0 18753.0 + 42441 VTFSIIYNY 9 154 560.2913618497519 1118.5681707663036 2 560.2893554568291 MULTI CID FTMS 0 0 0 5471 98026.5234375 1.0 0 0.0 6 Unmodified _VTFSIIYNY_ REV__ENSG00000123384|ENST00000243077|LRP1 7.289230182591677 0.6602208344931196 5 {I|L}NY 3 -1 21.198 0.0 0.0 1.8951 0.0 0.0 710.3685685707943 0.0 710.3685685707943 0.0 10.740312677277188 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}NY 1.8951 - 114 + 1 2.344 96588.2 0.75 1562 3913 5471 SUDHL4_400M_050219_1,5477 SUDHL4_400M_050219_1,5477,VTFSIIYNY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5479 28.036 97.0 851690.0 25 0 128520.0 + 29184 QGDFFNDSY 9 87 546.7192714049193 1091.4239898766384 2 546.7192260622978 MULTI CID FTMS 0 0 0 5478 751352.25 0.2929155467379886 3 -0.1303424835205078 1 Unmodified _QGDFFNDSY_ REV__ENSG00000151748|ENST00000324679|SAV1 6.2057823575117 0.6980434486082533 5 YT 2 -1 25.217 0.0 0.0 2.3104 0.0 0.0 0.0 824.2912070888124 824.2912070888124 11.527040691668656 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YT 2.3104 - 14 + 1 2.321 68994.8 1.0 1563 3914 5478 SUDHL4_400M_050219_1,5479 SUDHL4_400M_050219_1,5479,QGDFFNDSY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5480 28.049 800.0 26823.0 25 0 2459.1 -1 YKRMRRACCFD 11 47 753.3503906130791 0 753.3503906130791 PEAK CID FTMS 0 0 0 -1 0 2 Carbamidomethyl (C) _YKRMRRAC(Carbamidomethyl (C))CFD_ ENSG00000156113|ENST00000286628|KCNMA1;nc|ENSG00000156113|Q12791-3|KCNMA1 1.1933415558491238 0.4761840153648598 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.46453 0.0 0.0 1059.5478748767457 295.03659998111567 1354.584474857861 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.46453 + + 1 + 1 2.321 26813.6 0.6499999761581421 1564 3914 5478 SUDHL4_400M_050219_1,5480 SUDHL4_400M_050219_1,5480,YKRMRRACCFD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5481 28.052 139.0 445600.0 25 0 38731.0 + 38682 TTLKLTRFCI 10 91 399.23259163567207 1194.6759455072165 3 399.2328979372978 MULTI CID FTMS 0 0 0 5478 252876.765625 0.8497503849420075 -1 0.0623207092285156 3 Unmodified _TTLKLTRFCI_ REV__ENSG00000101162|ENST00000217133|TUBB1;REV__ENSG00000104833|ENST00000264071|TUBB4A;REV__ENSG00000137267|ENST00000333628|TUBB2A;REV__ENSG00000137285|ENST00000259818|TUBB2B;REV__ENSG00000176014|ENST00000317702|TUBB6;REV__ENSG00000188229|ENST00000340384|TUBB4B;REV__ENSG00000196230|ENST00000327892|TUBB;REV__ENST00000404155.1_1_6:3177457-3179994:-|nuORF;REV__ENST00000417736.2_1_18:12308439-12326126:+|nuORF;REV__ENST00000450755.1_1_X:122696050-122696458:+|nuORF;REV__ENST00000604929.1_1_9:140136931-140138005:+|nuORF 14.218169984304629 0.6089749286722269 5 [VG]RY{I|L}YK{I|L}[PS] 10 -1 + 55.648 0.0 0.0 4.658 4.658 81.362 0.0 0.0 0.0 4.203555389302522 7.269987279362624 4.203555389302522 4.203555389302522 0 0.3252574989159953 2.0 0.0 0.0 [VG]RY{I|L}YK{I|L}[PS];[PS]KY{I|L}YK{I|L}[PS];[VG][VG]Y{I|L}YK{I|L}[PS];{[DS]|[MA]|[CV]|TT}{I|L}KY[WQ]KK;[K{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}YK{I|L}[PS];{[DS]|[MA]|[CV]|TT}{I|L}K{[{M(Oxidation (M))|F}D]|MM}[KS]KK 4.658;4.3062;3.8909;2.9493;2.7116;2.1347 -;-;-;-;-;- 116 1 2.321 51448.1 1.0 1565 3914 5478 SUDHL4_400M_050219_1,5481 SUDHL4_400M_050219_1,5481,TTLKLTRFCI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5482 28.066 800.0 83693.0 25 0 3647.4 8835 EYSNLCEPEQF 11 110 679.783762297419 1357.552971661638 2 680.2846557497978 MULTI CID FTMS 0 0 0 5478 86129.140625 0.965017182852511 -2 0.1000843048095703 4 Unmodified _EYSNLCEPEQF_ ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-7|DIAPH3 8.745405648335112 0.8338865417133445 5 [YE]VC(Carbamidomethyl (C))EAQQDA 10 7 51.903 0.0 0.0 3.8233 0.0 0.0 0.0 161.05092974500204 161.05092974500204 32.65081981720819 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.8494850021680094 0.0 [YE]VC(Carbamidomethyl (C))EAQQDA 3.8233 - 1648 1 2.321 54058.9 0.6700000166893005 1566 3914 5478 SUDHL4_400M_050219_1,5482 SUDHL4_400M_050219_1,5482,EYSNLCEPEQF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5483 28.08 800.0 288260.0 25 0 20270.0 + 9493 FLDKNDHSL 9 262 363.51692898182574 1087.5289575456773 3 363.5173828005791 MULTI CID FTMS 0 0 0 5478 81266.734375 1.0 0 0.0 5 Unmodified _FLDKNDHSL_ ENSG00000122966|ENST00000392521|CIT;ENST00000537607.5_1_12:120126039-120222037:-|nuORF;ENST00000545913.5_1_12:120126039-120222037:-|nuORF;nc|ENSG00000122966|O14578-3|CIT;nc|ENSG00000122966|O14578|CIT 20.580933911654288 0.2795815587326093 5 KD{I|L}E 4 7 30.165 0.0 0.0 2.7737 0.0 0.0 584.2558460919937 0.0 584.2558460919937 0.0 17.946537861557985 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 KD{I|L}E 2.7737 - 357 1 2.321 179556.8 0.4399999976158142 1567 3914 5478 SUDHL4_400M_050219_1,5483 SUDHL4_400M_050219_1,5483,FLDKNDHSL False True FLDKNDHSL 28.079835 363.517382800579 303311.0625 5478.0 nc|ENSG00000122966|O14578|CIT;;ENSG00000122966|ENST00000392521|CIT;;ENST00000545913.5_1_12:120126039-120222037:-|nuORF;;nc|ENSG00000122966|O14578-3|CIT;;ENST00000537607.5_1_12:120126039-120222037:-|nuORF 5.982812881469727 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5484 28.086 362.0 308020.0 25 0 41237.0 -1 0 121 499.2751277147534 498.2678512481534 1 499.2753784060478 MULTI CID FTMS 0 0 0 5478 198897.796875 0.3831961324504938 -10 0.396371841430664 6 5 Y 1 -1 10.837 0.0 0.0 2.175 0.0 0.0 317.1936000047925 0.0 317.1936000047925 0.0 0.1241179186251617 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.175 - 34 + 1 2.321 88514.4 1.0 1568 3914 5478 SUDHL4_400M_050219_1,5484 SUDHL4_400M_050219_1,5484, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5485 28.093 374.0 223080.0 25 0 28761.0 -1 0 107 493.26218903925474 492.2549125726548 1 493.2638122439384 MULTI CID FTMS 0 0 0 5478 113731.8046875 0.3535570959769646 -7 0.2934303283691406 7 5 Y 1 -1 11.259 0.0 0.0 2.2872 0.0 0.0 311.1805087414032 0.0 311.1805087414032 0.0 0.6631278263729534 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.2872 - 35 + 1 2.321 68900.1 1.0 1569 3914 5478 SUDHL4_400M_050219_1,5485 SUDHL4_400M_050219_1,5485, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5487 28.098 17.0 4024500.0 25 0 1515100.0 27827 PLPWQQRSL 9 59 375.5436194035469 1123.6090288108408 3 375.5435363650322 MULTI CID FTMS 0 0 0 5486 1837660.75 0.5582021388282957 2 -0.0670642852783203 1 Unmodified _PLPWQQRSL_ ENST00000448404.5_1_11:64532928-64535069:-|nuORF;nc|ENSG00000168066|Q15637-4|SF1;nc|ENSG00000168066|Q15637-5|SF1 22.65808497894818 0.2428932432760099 5 RS{I|L} 3 6 41.682 0.0 0.0 3.7097 0.0 0.0 749.3781825371576 0.0 749.3781825371576 0.0 29.916440611282624 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 + RS{I|L} 3.7097 + + 28 + 1 2.321 58126.4 1.0 1570 3915 5486 SUDHL4_400M_050219_1,5487 SUDHL4_400M_050219_1,5487,PLPWQQRSL False False False False non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_1 5488 28.099 55.0 1170200.0 25 0 373160.0 16026 ITHFPGPRSL 10 54 562.8121250347717 1123.6096971363434 2 562.8120605349541 MULTI CID FTMS 0 0 0 5486 919551.625 0.5484925243010822 1 -0.0365524291992187 2 Unmodified _ITHFPGPRSL_ ENST00000507324.1_1_15:64821605-64821743:-|nuORF 8.97624648632007 0.6851160995914376 5 {I|L} 1 9 13.099 0.0 0.0 1.1658 0.0 0.0 992.5149838568497 0.0 992.5149838568497 0.0 7.257724967479859 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1658 + + 14 + 1 2.321 56307.7 1.0 1571 3915 5486 SUDHL4_400M_050219_1,5488 SUDHL4_400M_050219_1,5488,ITHFPGPRSL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5489 28.102 145.0 409930.0 25 0 58627.0 + 44144 YLDPAQRGV 9 58 509.769635505208 1017.524718077216 2 509.7698242068291 MULTI CID FTMS 0 0 0 5486 259158.875 0.0436950416467012 -10 0.4532451629638672 3 Unmodified _YLDPAQRGV_ ENSG00000130731|ENST00000301686|METTL26;ENST00000448973.6_1_16:685849-686290:-|nuORF;nc|ENSG00000130731|Q96S19-2|METTL26;nc|ENSG00000130731|Q96S19-3|METTL26;nc|ENSG00000130731|Q96S19-4|METTL26;nc|ENSG00000130731|Q96S19-5|METTL26;nc|ENSG00000130731|Q96S19-6|METTL26 30.63653989081413 0.1413794767160703 5 [Y{I|L}]DPAQ 6 3 52.625 0.0 0.0 5.1718 0.0 0.0 0.0 327.1776217096313 327.1776217096313 41.65546248849069 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.4247425010840047 + [Y{I|L}]DPAQ 5.1718 + + 40 + 1 2.321 53484.6 1.0 1572 3915 5486 SUDHL4_400M_050219_1,5489 SUDHL4_400M_050219_1,5489,YLDPAQRGV False True YLDPAQRGV 28.101926 509.769824206829 114765048.0 5486.0 nc|ENSG00000130731|Q96S19-2|METTL26;;nc|ENSG00000130731|Q96S19-4|METTL26;;ENSG00000130731|ENST00000301686|METTL26;;ENST00000448973.6_1_16:685849-686290:-|nuORF;;nc|ENSG00000130731|Q96S19-3|METTL26;;nc|ENSG00000130731|Q96S19-5|METTL26;;nc|ENSG00000130731|Q96S19-6|METTL26 8.892939249674479 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5490 28.107 263.0 246750.0 25 0 41922.0 + 33806 SLDPKTNTL 9 104 494.768728794276 0 494.7693664431572 PEAK CID FTMS 0 0 0 5486 129518.6640625 0.2214233423075932 -7 0.3235816955566406 4 Unmodified _SLDPKTNTL_ ENSG00000127837|ENST00000248450|AAMP;ENST00000461911.1_1_2:219132163-219134845:-|nuORF;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF 38.17557092003332 0.0706864996250298 5 DKWWS 5 7 23.232 0.0 0.0 2.3525 0.0 0.0 200.11791185234367 82.0669191949828 282.1848310473265 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.6549471895720985 0.4247425010840047 DKWWS 2.3525 - 326 + 1 2.321 53850.4 1.0 1573 3915 5486 SUDHL4_400M_050219_1,5490 SUDHL4_400M_050219_1,5490,SLDPKTNTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5491 28.121 800.0 85371.0 25 0 3091.1 + -1 YCLNLASSYSF 11 86 662.7996617897201 1323.58477064624 2 663.3020507693291 MULTI CID FTMS 0 0 0 5486 92272.296875 0.2342543099874769 -4 0.2209205627441406 5 Carbamidomethyl (C) _YC(Carbamidomethyl (C))LNLASSYSF_ REV__ENSG00000116032|ENST00000234389|GRIN3B 9.38312468134398 0.8308777417566128 5 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAEQNA 11 -1 50.939 0.0 0.0 3.8486 0.0 0.0 0.0 161.0547530424307 161.0547530424307 36.234357771110446 0.0 0.0 0.0 0 0.0 0.744727494896694 0.4247425010840047 0.805462187404089 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAEQNA 3.8486 - 1385 1 2.321 55973.4 0.6100000143051147 1574 3915 5486 SUDHL4_400M_050219_1,5491 SUDHL4_400M_050219_1,5491,YCLNLASSYSF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5492 28.123 112.0 476790.0 25 0 74177.0 -1 0 74 539.2371889060739 538.2299124394739 1 539.2371703982353 MULTI CID FTMS 0 0 0 5486 589841.6875 0.4961454293950648 4 -0.1209487915039062 6 5 [{I|L}V]W 3 -1 14.181 0.0 0.0 2.6348 0.0 0.0 0.0 136.96655119363325 136.96655119363325 0.3883963391121021 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [{I|L}V]W 2.6348 - 18 1 2.321 45078.5 1.0 1575 3915 5486 SUDHL4_400M_050219_1,5492 SUDHL4_400M_050219_1,5492, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5493 28.13 366.0 290460.0 25 0 29046.0 + -1 KSMFLCNECC 10 106 674.7627224116789 1347.5108918901576 2 674.7628051638603 MULTI CID FTMS 0 0 0 5486 221447.640625 0.3805515231137678 -4 0.2209205627441406 7 3 Carbamidomethyl (C) _KSMFLC(Carbamidomethyl (C))NEC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ REV__ENSG00000104755|ENST00000265708|ADAM2;REV__nc|ENSG00000104755|Q99965-2|ADAM2 5.731851221503515 0.7001233259664787 5 [TP]QGQY 6 -1 34.121 0.0 0.0 2.5321 0.0 0.0 0.0 670.1898219040826 670.1898219040826 5.8520517687891065 0.0 0.0 0.0 0 0.0 1.0 1.2104093769761877 0.6109243748081782 [TP]QGQY 2.5321 - 859 1 2.321 79163.1 1.0 1576 3915 5486 SUDHL4_400M_050219_1,5493 SUDHL4_400M_050219_1,5493,KSMFLCNECC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5495 28.139 318.0 219940.0 25 0 22728.0 + 11918 GLYTGEVRTA 10 106 533.7802903473056 0 533.7798339724541 PEAK CID FTMS 0 0 0 5494 125854.09375 0.952529743708487 -2 0.0998306274414062 1 Unmodified _GLYTGEVRTA_ ENSG00000253537|ENST00000518325|PCDHGA7;nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7 30.7034409873982 0.2099104859468384 5 YTWV{M(Oxidation (M))|F}GG 7 7 43.396 0.0 0.0 4.0727 0.0 0.0 170.10619664068332 82.06688104801015 252.17307768869347 0.0 0.0 0.0 0.0 0 1.142159058960253 0.0 0.805462187404089 0.0 YTWV{M(Oxidation (M))|F}GG 4.0727 - 230 + 1 2.309 59371.3 1.0 1577 3916 5494 SUDHL4_400M_050219_1,5495 SUDHL4_400M_050219_1,5495,GLYTGEVRTA False True GLYTGEVRTA 28.139045 533.779833972454 1555791.5 5494.0 ENSG00000253537|ENST00000518325|PCDHGA7;;nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7 7.185187975565593 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5496 28.153 800.0 180130.0 25 0 36291.0 + 36911 TESLSGCPEEK 11 136 590.266171126569 1178.517789319938 2 590.2658569216728 MULTI CID FTMS 0 0 0 5494 145074.796875 0.03792097041095 7 -0.2122154235839843 2 Unmodified _TESLSGCPEEK_ REV__ENSG00000188895|ENST00000398532|MSL1;REV__nc|ENSG00000188895|Q68DK7-2|MSL1;REV__nc|ENSG00000188895|Q68DK7-3|MSL1 31.26834338654808 0.3580123756476716 5 HVDAAEK 7 -1 54.448 0.0 0.0 4.62 0.0 0.0 410.13953422392393 0.0 410.13953422392393 0.0 33.19701192848834 0.0 0.0 0 2.579689690656103 0.0 0.3494850021680094 0.3252574989159953 HVDAAEK 4.62 - 653 + 1 2.309 112127.2 0.6600000262260437 1578 3916 5494 SUDHL4_400M_050219_1,5496 SUDHL4_400M_050219_1,5496,TESLSGCPEEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5497 28.16 403.0 117480.0 25 0 20346.0 -1 0 55 584.2946199331469 583.2873434665469 1 584.2957641482353 MULTI CID FTMS 0 0 0 5494 137389.453125 0.945083241230014 1 -0.0305118560791015 3 5 Y 1 -1 12.474 0.0 0.0 2.1386 0.0 0.0 402.2131379995531 0.0 402.2131379995531 0.0 1.054266826574466 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.1386 - 8 + 1 2.309 45210.5 1.0 1579 3916 5494 SUDHL4_400M_050219_1,5497 SUDHL4_400M_050219_1,5497, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5499 28.165 98.0 525250.0 25 0 53034.0 10872 GAEVELSAPV 10 78 486.255198508216 970.495844083232 2 486.2547790408134 MULTI CID FTMS 0 0 0 5498 418722.09375 0.3809537659618893 9 -0.2011356353759765 1 Unmodified _GAEVELSAPV_ ENSG00000169169|ENST00000598293|CPT1C;ENST00000295404.9_1_19:50194996-50204826:+|nuORF;ENST00000599023.5_1_19:50195509-50213852:+|nuORF;ENST00000600944.5_1_19:50195509-50200723:+|nuORF;nc|ENSG00000169169|Q8TCG5-2|CPT1C;nc|ENSG00000169169|Q8TCG5-3|CPT1C 26.88365393820708 0.3646707531412818 5 [{I|L}T][C(Carbamidomethyl (C))H]Q 5 9 25.77 0.0 0.0 2.6553 0.0 0.0 0.0 328.1886495378157 328.1886495378157 11.165827977365623 0.0 0.0 0.0 0 0.5 2.0 0.7302046884880937 0.0 [{I|L}T][C(Carbamidomethyl (C))H]Q 2.6553 - 104 1 2.309 43550.2 1.0 1580 3917 5498 SUDHL4_400M_050219_1,5499 SUDHL4_400M_050219_1,5499,GAEVELSAPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5500 28.179 800.0 122080.0 25 0 30431.0 -1 0 54 1188.8175987090676 3563.430966727403 3 1189.150683581829 MULTI CID FTMS 0 0 0 5498 289301.40625 0.3386740005679171 5 -0.1473884582519531 2 5 E 1 -1 6.9897 0.0 0.0 0.19615 0.0 0.0 2907.202959055021 524.1632442080725 3431.3662032630937 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19615 - 9 + 1 2.309 88129.7 0.7699999809265137 1581 3917 5498 SUDHL4_400M_050219_1,5500 SUDHL4_400M_050219_1,5500, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5502 28.195 800.0 202990.0 25 0 17465.0 + -1 CNWREFRFQFQ 11 104 809.3690594901095 1616.723566047019 2 809.3691284060478 MULTI CID FTMS 0 0 0 5501 121434.6875 0.6859590498029102 -1 0.0184154510498046 1 Carbamidomethyl (C) _C(Carbamidomethyl (C))NWREFRFQFQ_ REV__ENSG00000143816|ENST00000272164|WNT9A 1.3295316138638542 0.8688751186870782 5 {M(Oxidation (M))|F}ANQQA[Q{I|L}]{M(Oxidation (M))|F}NQ 11 -1 65.654 0.0 0.0 4.0609 0.0 0.0 309.14063255268144 0.0 309.14063255268144 0.0 58.66428596210983 0.0 0.0 0 0.3494850021680094 0.0 0.0 1.4604093769761874 {M(Oxidation (M))|F}ANQQA[Q{I|L}]{M(Oxidation (M))|F}NQ 4.0609 - 2611 + 1 2.309 116499.4 0.6700000166893005 1582 3918 5501 SUDHL4_400M_050219_1,5502 SUDHL4_400M_050219_1,5502,CNWREFRFQFQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5503 28.2 292.0 355700.0 25 0 29362.0 + 31320 RMGPPLHTV 9 101 504.2767544501282 1006.5389559670564 2 504.2766296267509 MULTI CID FTMS 0 0 0 5501 80806.6328125 0.9780420982001355 -3 0.085479736328125 2 Unmodified _RMGPPLHTV_ nc|ENSG00000012660|Q9NYP7-3|ELOVL5 30.63653989081413 0.1413794767160703 5 {[TV]|[{I|L}S]}H[WK]HTV 8 6 + 41.555 0.0 0.0 4.1285 4.1285 81.987 0.0 0.0 0.0 7.0774392864352365 16.40978057358332 7.0774392864352365 7.0774392864352365 0 0.8274509799928715 0.8538719643217619 0.0 0.3807196863200844 {[TV]|[{I|L}S]}H[WK]HTV;[HT]V[WK]HTV;{[QD]|[EN]|[WG]|[KD]|[RS]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[RE]|[WV]}TV;[HT][HK]{[RE]|[WV]}TV;{[QD]|[EN]|[WG]|[KD]|[RS]}{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]TV;{[QS]|[NT]}[RN][R{M(Oxidation (M))|F}]TV 4.1285;3.4253;3.2342;2.5397;1.7946;0.72243 -;-;-;-;-;- 84 1 2.309 82841.1 1.0 1583 3918 5501 SUDHL4_400M_050219_1,5503 SUDHL4_400M_050219_1,5503,RMGPPLHTV False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 5504 28.208 437.0 309290.0 25 0 32616.0 + 12243 GQYEQVKQL 9 128 546.7885677175375 1091.5625825018749 2 546.7881347537041 MULTI CID FTMS 0 0 0 5501 143296.9375 1.0 0 0.0 3 Unmodified _GQYEQVKQL_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 43.77239144664712 0.0547478964384323 5 {[QG]|[NA]}YEQVK{I|L}Q 9 2 + 47.523 0.0 0.0 4.3536 4.3536 75.651 0.0 0.0 0.0 8.318555138642907 0.4068182437442473 0.4068182437442473 0.4068182437442473 0 0.8252574989159953 0.5686362358410126 0.0 0.7031198197908842 {[QG]|[NA]}YEQVK{I|L}Q;{[QG]|[NA]}YEQVKQ{I|L};{[QG]|[NA]}YE[AG]VK{I|L}Q;{[QG]|[NA]}YE[AG]VKQ{I|L};{[QG]|[NA]}YEQVK[AG]{I|L};{[QG]|[NA]}YE[AG]VK[AG]{I|L};[AG]EYV[KQ]GQ{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YV[KQ]GQ{I|L};[AG]YEV[KQ]GQ{I|L};[YE]QV[KQ]GQ{I|L} 4.3536;4.3164;3.5101;3.4728;3.2083;2.3687;1.7009;1.2166;1.0472;0.94319 -;+;-;-;-;-;-;-;-;- + 410 + 1 2.309 107202.3 1.0 1584 3918 5501 SUDHL4_400M_050219_1,5504 SUDHL4_400M_050219_1,5504,GQYEQVKQL True True GQYEQVKQL 28.207828 546.788134753704 800479.125 5501.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 5.747406959533691 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5505 28.214 340.0 300830.0 25 0 19046.0 39416 VALGAAEK 8 145 379.72417934654425 757.4338057598885 2 379.7234374880791 MULTI CID FTMS 0 0 0 5501 142698.875 0.4981136241215256 -3 0.085479736328125 4 Unmodified _VALGAAEK_ ENSG00000145901|ENST00000521591|TNIP1;nc|ENSG00000145901|Q15025-2|TNIP1;nc|ENSG00000145901|Q15025-3|TNIP1;nc|ENSG00000145901|Q15025-4|TNIP1;nc|ENSG00000145901|Q15025-5|TNIP1;nc|ENSG00000145901|Q15025-6|TNIP1;nc|ENSG00000145901|Q15025-7|TNIP1;nc|ENSG00000145901|Q15025-8|TNIP1 32.116972079565 0.368454113111938 5 E[RK]EK 5 6 26.708 0.0 0.0 3.5261 0.0 0.0 69.05864913154453 0.0 69.05864913154453 0.0 7.244237387763093 0.0 0.0 0 0.3494850021680094 0.0 0.25 0.0 E[RK]EK 3.5261 - 231 1 2.309 85804.8 1.0 1585 3918 5501 SUDHL4_400M_050219_1,5505 SUDHL4_400M_050219_1,5505,VALGAAEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5507 28.219 17.0 2783200.0 25 0 861610.0 + 12247 GQYPTQPTY 9 63 527.7454617026201 1053.47637047204 2 527.7457153201103 MULTI CID FTMS 0 0 0 5506 2584479.75 0.0452829488991978 7 -0.1472511291503906 1 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 21.74664581756881 0.2544899275067181 5 [TP]QY 4 5 31.484 0.0 0.0 2.9886 0.0 0.0 0.0 561.2305263160432 561.2305263160432 10.069619513137056 0.0 0.0 0.0 0 0.0 1.154901959985743 0.6747425010840047 0.0 [TP]QY 2.9886 - 48 1 2.303 42699.0 1.0 1586 3919 5506 SUDHL4_400M_050219_1,5507 SUDHL4_400M_050219_1,5507,GQYPTQPTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5508 28.22 33.0 1147200.0 25 0 174590.0 + 31145 RLPDDDPTAV 10 63 549.7749447285977 1097.5353365239953 2 549.7749511599541 MULTI CID FTMS 0 0 0 5506 1551329.875 0.5607245634141407 6 -0.1368064880371093 2 Unmodified _RLPDDDPTAV_ ENSG00000158623|ENST00000425248|COPG2 28.181266145913348 0.3355154477840527 5 [R{I|L}][DP]DDPTAV 10 0 + 50.623 0.0 0.0 4.6124 4.6124 87.997 0.0 0.0 0.0 1.249387366082999 45.13805019828801 1.249387366082999 14.376432476198636 0 0.9247425010840048 0.0 0.5 0.0 + + [R{I|L}][DP]DDPTAV;[TP][WP]{[ET]|[MV]}PTAV;{[ES]|[DT]|[{I|L}C]}{[RE]|[WV]}D[RH]AV;[R{I|L}][DP]DDPG[{I|L}T];[TP][WP]{[ET]|[MV]}PG[{I|L}T];[R{I|L}][DP]DD{[VA]|[{I|L}G]}[TP] 4.6124;3.3025;1.8985;1.8801;0.57023;0.55979 +;-;-;-;-;- + 99 1 2.303 40393.6 1.0 1587 3919 5506 SUDHL4_400M_050219_1,5508 SUDHL4_400M_050219_1,5508,RLPDDDPTAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5509 28.222 117.0 819350.0 25 0 75624.0 + 11535 GIPPAPRGV 9 98 432.25862846706417 862.5027040009284 2 432.2584411501884 MULTI CID FTMS 0 0 0 5506 294495.375 0.2915289765606898 -8 0.3418693542480469 3 Unmodified _GIPPAPRGV_ ENSG00000044574|ENST00000324460|HSPA5;ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000432228.1_1_2:222827655-222828180:+|nuORF;ENST00000509378.1_1_4:165110937-165111516:+|nuORF;ENST00000532091.1_1_11:122929265-122929517:-|nuORF;nc|ENSG00000204389|P0DMV8-2|HSPA1A 10.823927491677226 0.5436922275383211 5 {[VA]|[{I|L}G]}PPA 5 4 29.297 0.0 0.0 3.3967 0.0 0.0 0.0 424.2325533502563 424.2325533502563 29.296831374325905 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + {[VA]|[{I|L}G]}PPA 3.3967 + + 19 + 1 2.303 78521.1 1.0 1588 3919 5506 SUDHL4_400M_050219_1,5509 SUDHL4_400M_050219_1,5509,GIPPAPRGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5510 28.226 214.0 290320.0 25 0 68123.0 + 30906 RISGVDRYY 9 72 564.7937790087734 1127.5730050843467 2 564.7939330935478 MULTI CID FTMS 0 0 0 5506 179377.40625 0.3288154656222314 -4 0.1209487915039062 4 Unmodified _RISGVDRYY_ ENSG00000125356|ENST00000371437|NDUFA1 24.99096001346401 0.2132109383330889 5 GMMD 4 8 18.276 0.0 0.0 1.6208 0.0 0.0 181.153340632978 509.284494268225 690.4378349012029 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 GMMD 1.6208 - 31 + 1 2.303 54343.1 1.0 1589 3919 5506 SUDHL4_400M_050219_1,5510 SUDHL4_400M_050219_1,5510,RISGVDRYY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5511 28.23 200.0 281740.0 25 0 53438.0 + 8964 FANSRDTSF 9 82 522.7396872608986 1043.464821588597 2 522.7408935427666 MULTI CID FTMS 0 0 0 5506 158530.625 0.4837909370236755 -2 0.0538845062255859 5 Unmodified _FANSRDTSF_ ENSG00000169710|ENST00000306749|FASN 34.40172386719151 0.1061884637610825 5 NAE 3 8 38.06 0.0 0.0 3.6474 0.0 0.0 711.317974884091 0.0 711.317974884091 0.0 18.36696871556164 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.7614393726401688 NAE 3.6474 - 31 1 2.303 50326.0 1.0 1590 3919 5506 SUDHL4_400M_050219_1,5511 SUDHL4_400M_050219_1,5511,FANSRDTSF True True FANSRDTSF 28.230065 522.740893542767 1462417.0 5506.0 ENSG00000169710|ENST00000306749|FASN 4.460334221522014 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5512 28.244 800.0 93009.0 25 0 8252.7 8637 EVEEDEYKAFY 11 102 711.3077748010962 1420.6009966689924 2 711.3074218630791 MULTI CID FTMS 0 0 0 5506 145950.078125 0.2035137166446016 5 -0.1328105926513672 6 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 16.149105407346934 0.6992268271266642 5 [AG]AHDEAQNQA{M(Oxidation (M))|F}Y 13 8 + 82.235 0.0 0.0 5.7888 5.7888 82.964 0.0 0.0 0.0 7.611179110848624 11.448658907276368 7.611179110848624 2.6979531151190628 0 0.8935078169319297 1.3979400086720375 0.2887254899964357 1.1989700043360187 [AG]AHDEAQNQA{M(Oxidation (M))|F}Y;[AG]AHDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[AG]AHDEAQGGQA{M(Oxidation (M))|F}Y;[AG]AHDEA[AG]NQA{M(Oxidation (M))|F}Y;[AG]AHDEAQN[AG]A{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[AG]N[HN]SAQNQA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]SAQNQA{M(Oxidation (M))|F}Y;[AG]AHDEAQQGGA{M(Oxidation (M))|F}Y 5.7888;5.5989;5.253;5.1501;5.1501;5.1501;5.0631;5.0296;5.011;4.9602 -;-;-;-;-;-;-;-;-;- 2061 1 2.303 59153.3 0.6700000166893005 1591 3919 5506 SUDHL4_400M_050219_1,5512 SUDHL4_400M_050219_1,5512,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5513 28.249 298.0 295660.0 25 0 14543.0 + 15757 ISDDLVTDLP 10 116 544.2792376472692 1086.5439223613382 2 544.2798950076103 MULTI CID FTMS 0 0 0 5506 98936.125 1.0 0 0.0 7 Unmodified _ISDDLVTDLP_ REV__ENSG00000138381|ENST00000260952|ASNSD1 9.38312468134398 0.6832340498775793 5 [TP]QVT 5 -1 23.249 0.0 0.0 2.1397 0.0 0.0 0.0 557.2484835260374 557.2484835260374 8.82393644412831 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 [TP]QVT 2.1397 - 216 + 1 2.303 70211.7 1.0 1592 3919 5506 SUDHL4_400M_050219_1,5513 SUDHL4_400M_050219_1,5513,ISDDLVTDLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5515 28.254 48.0 1191700.0 25 0 146290.0 + 2136 APVPAPERK 9 74 482.78254716373465 963.5505413942692 2 482.7823364138603 MULTI CID FTMS 0 0 0 5514 1113425.625 0.4113673641413329 7 -0.1179428100585937 1 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 21.74664581756881 0.2544899275067181 5 [PA]APV 5 -1 52.461 0.0 0.0 5.4445 0.0 0.0 0.0 525.2794766088151 525.2794766088151 22.768024924119672 0.0 0.0 0.0 0 1.325257498915995 1.6989700043360187 0.0 0.0 [PA]APV 5.4445 - 53 + 1 2.303 49749.0 1.0 1593 3920 5514 SUDHL4_400M_050219_1,5515 SUDHL4_400M_050219_1,5515,APVPAPERK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5516 28.258 192.0 401880.0 25 0 27300.0 -1 0 110 455.2498587643572 454.2425822977572 1 455.2486144900322 MULTI CID FTMS 0 0 0 5514 216783.34375 0.4821726767609402 -13 0.5130748748779297 2 5 {[QN]|[E{I|L}]|[KN]}PP 4 -1 + 17.211 0.0 0.0 3.7889 3.7889 86.017 0.0 0.0 0.0 7.878330308840086 6.4972982491453415 6.4972982491453415 17.210635766988997 0 0.0 0.958607314841775 0.0 0.0 {[QN]|[E{I|L}]|[KN]}PP 3.7889 - 27 + 1 2.303 64229.7 1.0 1594 3920 5514 SUDHL4_400M_050219_1,5516 SUDHL4_400M_050219_1,5516, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5517 28.272 800.0 149320.0 25 0 11275.0 + 32027 RVIGEDGQSVY 11 125 611.8069934212069 1221.5994339092138 2 611.8065673708916 MULTI CID FTMS 0 0 0 5514 155541.1875 0.696769126854415 -4 0.1198139190673828 3 Unmodified _RVIGEDGQSVY_ ENSG00000183735|ENST00000331710|TBK1 34.221707139014875 0.3014076866608453 5 [RV]{I|L}{[DA]|[EG]}DGQSVY 11 0 + 64.214 0.0 0.0 5.2565 5.2565 86.875 0.0 0.0 0.0 5.862435673934286 42.31486060122113 5.862435673934286 9.128498242811006 0 1.0 0.0 0.8252574989159953 0.0 + + [RV]{I|L}{[DA]|[EG]}DGQSVY;[RV]{I|L}{[DA]|[EG]}DG[AG]SVY;[AG]G{I|L}E{[QN]|[E{I|L}]|[KN]}GQSVY;[AG][W{I|L}]{[QN]|[E{I|L}]|[KN]}GQSVY;[RV][DG]{[QN]|[E{I|L}]|[KN]}GQSVY;{[QG]|[NA]}{I|L}E{[QN]|[E{I|L}]|[KN]}GQSVY;[AG]G{I|L}E[W{I|L}]QSVY;[RV]{I|L}[WD]GQWY;[RV]{I|L}{[DA]|[EG]}[NG]ESVY;[QA][PA]QG{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}VY 5.2565;4.5093;4.2145;4.043;3.968;3.9262;3.6733;3.6113;3.5775;3.541 +;-;-;-;-;-;-;-;-;- + 507 1 2.303 89924.1 0.699999988079071 1595 3920 5514 SUDHL4_400M_050219_1,5517 SUDHL4_400M_050219_1,5517,RVIGEDGQSVY False True RVIGEDGQSVY 28.271503 611.806567370892 1260781.75 5514.0 ENSG00000183735|ENST00000331710|TBK1 7.768338680267334 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5518 28.278 352.0 264970.0 25 0 17502.0 + + -1 RISDFHETY 9 95 584.2747449000035 1166.534936866807 2 584.2727538943291 MULTI CID FTMS 0 0 0 5514 129040.578125 0.4869927265363781 -5 0.1563663482666015 4 Oxidation (M) _TEM(Oxidation (M))HTLRTY_ ENSG00000183337|ENST00000378444|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR 25.399314129420983 0.2080152500878129 5 {M(Oxidation (M))|F}HETY 5 -1 49.196 0.0 0.0 4.2173 0.0 0.0 471.2451096027352 0.0 471.2451096027352 0.0 35.55076269579011 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}HETY 4.2173 - 334 1 2.303 71883.3 1.0 1596 3920 5514 SUDHL4_400M_050219_1,5518 SUDHL4_400M_050219_1,5518,TEMHTLRTY False False RISDFHETY 28.277874 584.272753894329 1176318.75 5514.0 ENSG00000183337|ENST00000378444|BCOR;;nc|ENSG00000183337|Q6W2J9-3|BCOR;;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;;nc|ENSG00000183337|Q6W2J9-2|BCOR;;nc|ENSG00000183337|Q6W2J9-4|BCOR 7.182615756988525 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5520 28.294 800.0 92069.0 25 0 23019.0 -1 0 43 1155.451440635416 3463.332492506448 3 1155.785571277142 MULTI CID FTMS 0 0 0 5519 150917.4375 0.7140627327619825 -3 0.099395751953125 1 5 VT 2 -1 13.443 0.0 0.0 0.38816 0.0 0.0 2736.016147205939 524.1695650690061 3260.185712274945 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 VT 0.38816 - 36 + 1 2.303 67282.9 0.4600000083446502 1597 3921 5519 SUDHL4_400M_050219_1,5520 SUDHL4_400M_050219_1,5520, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5521 28.302 469.0 154420.0 25 0 17665.0 + 1436 ALEEPDDQNRI 11 88 650.3122387867202 1298.6099246402405 2 650.3112670779228 MULTI CID FTMS 0 0 0 5519 176108.375 1.0 0 0.0 2 Unmodified _ALEEPDDQNRI_ ENSG00000072694|ENST00000358671|FCGR2B;ENST00000480308.5_1_1:161647083-161647340:+|nuORF;nc|ENSG00000072694|P31994-2|FCGR2B;nc|ENSG00000072694|P31994-3|FCGR2B;nc|ENSG00000072694|P31994-4|FCGR2B;nc|ENSG00000072694|P31994-5|FCGR2B 47.7319792270244 0.130190323903946 5 [{I|L}A]EEPDDQ 8 3 77.74 0.0 0.0 5.9864 0.0 0.0 0.0 398.21494470767817 398.21494470767817 45.61488190682673 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.3807196863200844 0.8494850021680094 + [{I|L}A]EEPDDQ 5.9864 + + 338 + 1 2.303 58483.5 1.0 1598 3921 5519 SUDHL4_400M_050219_1,5521 SUDHL4_400M_050219_1,5521,ALEEPDDQNRI False True ALEEPDDQNRI 28.302417 650.311267077923 814194.875 5519.0 ENST00000480308.5_1_1:161647083-161647340:+|nuORF;;nc|ENSG00000072694|P31994-3|FCGR2B;;nc|ENSG00000072694|P31994-5|FCGR2B;;nc|ENSG00000072694|P31994-2|FCGR2B;;nc|ENSG00000072694|P31994-4|FCGR2B;;ENSG00000072694|ENST00000358671|FCGR2B 5.985531012217204 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5522 28.307 269.0 171240.0 25 0 13868.0 176 AAMYGGYAGY 10 85 512.2146478011932 1022.4147426691864 2 512.2140380740166 MULTI CID FTMS 0 0 0 5519 81861.4921875 1.0 0 0.0 3 Unmodified _AAMYGGYAGY_ ENSG00000163694|ENST00000295971|RBM47;ENST00000510871.5_1_4:40427923-40438677:-|nuORF;nc|ENSG00000163694|A0AV96-2|RBM47 7.910154910731844 0.6900473968920092 5 Y 1 9 12.764 0.0 0.0 1.2484 0.0 0.0 841.3402930615676 0.0 841.3402930615676 0.0 0.7918124604762511 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2484 + + 32 + 1 2.303 40115.0 1.0 1599 3921 5519 SUDHL4_400M_050219_1,5522 SUDHL4_400M_050219_1,5522,AAMYGGYAGY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5524 28.315 279.0 237410.0 25 0 31027.0 + 13121 HEVMEQQTL 9 101 557.7631290380327 1113.5117051428654 2 558.2646972537041 MULTI CID FTMS 0 0 0 5523 100101.9765625 0.7732343032667551 1 -0.0343151092529296 1 Unmodified _HEVMEQQTL_ ENSG00000104738|ENST00000649973|MCM4 21.53697664764585 0.2571576504437394 5 {[YC]|[HE]}VMEQQT{I|L} 9 0 + 31.106 0.0 0.0 2.7935 2.7935 82.211 0.0 0.0 0.0 5.511000449145151 19.84686519556558 5.511000449145151 9.208187539523752 0 0.5242275032520141 0.0 0.0 0.0 + + {[YC]|[HE]}VMEQQT{I|L};{[YC]|[HE]}VME[AG]QT{I|L};{[YC]|[HE]}VMEQ[AG]T{I|L};{[YC]|[HE]}VME[AG][AG]T{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AA[HC]QE{[NV]|[RG]};[AG]T[VG][HC]Q[WR];[QT][VG][HC]Q[WR];[{I|L}T][NG][HC]Q[WR] 2.7935;1.9665;1.9665;1.1435;0.49164;0.23722;0.12328;0.077341 +;-;-;-;-;-;-;- + 224 1 2.303 53947.6 1.0 1600 3922 5523 SUDHL4_400M_050219_1,5524 SUDHL4_400M_050219_1,5524,HEVMEQQTL False True HEVMEQQTL 28.314969 558.264697253704 868609.5 5523.0 ENSG00000104738|ENST00000649973|MCM4 4.97036870320638 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5525 28.329 800.0 121650.0 25 0 4066.0 -1 LINNCSEFY 9 143 580.2597392748239 1158.5049256164475 2 580.2613403201103 MULTI CID FTMS 0 0 0 5523 81848.21875 0.4249394871508657 8 -0.1104602813720703 2 Carbamidomethyl (C) _LINNC(Carbamidomethyl (C))SEFY_ CON__Q32PI4 12.531546534597751 0.4974689918368763 5 {I|L}{I|L}[C(Carbamidomethyl (C))M]EAQQ 8 -1 48.421 0.0 0.0 4.1797 0.0 0.0 0.0 182.05503384883312 182.05503384883312 34.4420594384119 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.0 0.0 {I|L}{I|L}[C(Carbamidomethyl (C))M]EAQQ 4.1797 - 636 1 2.303 75911.6 0.5 1601 3922 5523 SUDHL4_400M_050219_1,5525 SUDHL4_400M_050219_1,5525,LINNCSEFY False False False False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 5526 28.331 118.0 616300.0 25 0 68954.0 -1 0 82 418.2275285271927 417.2202520605927 1 419.2318908572197 MULTI CID FTMS 0 0 0 5523 375361.5625 0.6436983045455773 8 -0.1104602813720703 3 5 [QA]S{I|L} 4 -1 + 22.263 0.0 0.0 5.336 5.336 89.264 0.0 0.0 0.0 5.228787452803374 11.003749548595644 5.228787452803374 10.00067386337658 0 0.0 0.0 0.3054621874040891 0.0 [QA]S{I|L};{[TV]|[{I|L}S]}[QA] 5.336;2.939 -;- 10 + 1 2.303 62050.0 1.0 1602 3922 5523 SUDHL4_400M_050219_1,5526 SUDHL4_400M_050219_1,5526, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5527 28.334 107.0 540070.0 25 0 42928.0 + 26267 NQMPTQPQV 9 79 521.7532026909945 1041.491852448789 2 521.7531616091728 MULTI CID FTMS 0 0 0 5523 339150.6875 0.2475986212913211 -10 0.3778152465820312 4 Unmodified _NQMPTQPQV_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 48.345845343767074 0.0439967357579942 5 CSN[TP] 5 7 22.747 0.0 0.0 2.1841 0.0 0.0 521.26176650215 0.0 521.26176650215 0.0 0.3650718925538143 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 CSN[TP] 2.1841 - 124 1 2.303 50963.5 1.0 1603 3922 5523 SUDHL4_400M_050219_1,5527 SUDHL4_400M_050219_1,5527,NQMPTQPQV True True NQMPTQPQV 28.333531 521.753161609173 15794040.0 5523.0 EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;;ENSG00000100393|ENST00000263253|EP300 5.959354718526204 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5528 28.342 453.0 289440.0 25 0 21900.0 + 30840 RILDESHSI 9 131 535.2859114925941 1068.557270051988 2 535.2861816287041 MULTI CID FTMS 0 0 0 5523 149345.21875 0.4756397037308337 -8 0.2777309417724609 5 Unmodified _RILDESHSI_ ENSG00000100888|ENST00000646647|CHD8;ENST00000554384.1_1_14:21876861-21881122:-|nuORF;nc|ENSG00000100888|Q9HCK8-2|CHD8 63.960520009940105 0.0238892913700936 5 ESHS{I|L} 5 4 68.505 0.0 0.0 6.411 0.0 0.0 497.29655414616826 0.0 497.29655414616826 0.0 57.53567058712731 0.0 0.0 0 2.018930178484529 0.0 1.1861818737241734 0.0 + ESHS{I|L} 6.411 + + 257 1 2.303 102146.5 1.0 1604 3922 5523 SUDHL4_400M_050219_1,5528 SUDHL4_400M_050219_1,5528,RILDESHSI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5530 28.347 117.0 453070.0 25 0 53160.0 -1 0 79 499.2751277147534 498.2678512481534 1 499.2748901247978 MULTI CID FTMS 0 0 0 5529 442044.78125 0.8516426687791816 -1 0.0343151092529296 1 5 V 1 -1 9.5329 0.0 0.0 1.9132 0.0 0.0 381.1883433519605 0.0 381.1883433519605 0.0 6.038041552508728 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.9132 - 2 + 1 2.303 47990.2 1.0 1605 3923 5529 SUDHL4_400M_050219_1,5530 SUDHL4_400M_050219_1,5530, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5533 28.355 9.1 7022300.0 25 0 1306200.0 + 44145 YLDPAQRGV 9 60 509.769635505208 1017.524718077216 2 509.7697936892509 MULTI CID FTMS 0 0 0 5532 5931082.0 1.0 0 0.0 1 Unmodified _YLDPAQRGV_ ENSG00000130731|ENST00000301686|METTL26;ENST00000448973.6_1_16:685849-686290:-|nuORF;nc|ENSG00000130731|Q96S19-2|METTL26;nc|ENSG00000130731|Q96S19-3|METTL26;nc|ENSG00000130731|Q96S19-4|METTL26;nc|ENSG00000130731|Q96S19-5|METTL26;nc|ENSG00000130731|Q96S19-6|METTL26 58.6788170122104 0.0268135626297836 5 Y{I|L}DPAQ 6 3 86.503 0.0 0.0 8.5013 0.0 0.0 0.0 327.1783541315063 327.1783541315063 74.72031994103764 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 1.1861818737241734 + Y{I|L}DPAQ 8.5013 + + 51 + 1 2.303 54523.9 1.0 1606 3925 5532 SUDHL4_400M_050219_1,5533 SUDHL4_400M_050219_1,5533,YLDPAQRGV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5534 28.357 76.0 578050.0 25 0 101110.0 + 33807 SLDPKTNTL 9 84 494.768728794276 0 494.7687255740166 PEAK CID FTMS 0 0 0 5532 507458.125 0.8675434921442904 3 -0.0205535888671875 2 Unmodified _SLDPKTNTL_ ENSG00000127837|ENST00000248450|AAMP;ENST00000461911.1_1_2:219132163-219134845:-|nuORF;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF 41.8396318013385 0.053988301646488 5 DD 2 8 12.959 0.0 0.0 1.3123 0.0 0.0 672.3796989442176 82.0669191949828 754.4466181392004 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 DD 1.3123 - 63 + 1 2.303 41339.9 1.0 1607 3925 5532 SUDHL4_400M_050219_1,5534 SUDHL4_400M_050219_1,5534,SLDPKTNTL True True SLDPKTNTL 28.357123 494.768725574017 8157019.0 5532.0 ENST00000489767.5_1_2:219130391-219134818:-|nuORF;;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;;ENSG00000127837|ENST00000248450|AAMP;;ENST00000461911.1_1_2:219132163-219134845:-|nuORF 5.693157990773519 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5535 28.361 205.0 312910.0 25 0 24451.0 -1 0 102 460.2388708546803 459.2315943880803 1 460.2387573122978 MULTI CID FTMS 0 0 0 5532 107312.5703125 0.5912271605516418 6 -0.0814533233642578 3 5 Y 1 -1 11.783 0.0 0.0 2.5658 0.0 0.0 278.1573584035084 0.0 278.1573584035084 0.0 1.0693990997254057 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5658 - 19 + 1 2.303 56038.5 1.0 1608 3925 5532 SUDHL4_400M_050219_1,5535 SUDHL4_400M_050219_1,5535, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5537 28.367 183.0 350270.0 25 0 17802.0 6727 EDKRQDMANAF 11 67 662.7996617897201 1323.58477064624 2 662.7996703982353 MULTI CID FTMS 0 0 0 5536 357162.15625 0.5178473835796024 5 -0.0710086822509765 1 Unmodified _EDKRQDMANAF_ ENSG00000062598|ENST00000290246|ELMO2;ENST00000480042.5_1_20:45008831-45014791:-|nuORF;nc|ENSG00000062598|Q96JJ3-3|ELMO2 20.41453444215458 0.6105011870913812 5 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F} 13 9 + 118.17 0.0 0.0 8.9278 8.9278 93.836 0.0 0.0 0.0 16.910103904887734 16.642078980768062 16.642078980768062 9.072459467631006 0 0.6694451763165201 1.3010299956639813 0.0 1.924742501084005 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG][AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQ[AG]GGA{M(Oxidation (M))|F} 8.9278;8.2424;8.2424;8.2424;8.1803;8.154;7.6502;7.5586;7.5586;7.5586 -;-;-;-;-;-;-;-;-;- 1980 1 2.303 51237.3 1.0 1609 3926 5536 SUDHL4_400M_050219_1,5537 SUDHL4_400M_050219_1,5537,EDKRQDMANAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5540 28.379 261.0 277520.0 25 0 35822.0 -1 PFDTVCRCMM 10 96 674.7627224116789 1347.5108918901576 2 674.7629882693291 MULTI CID FTMS 0 0 0 5539 332524.3125 0.5714336501264473 9 -0.1582489013671875 1 2 Carbamidomethyl (C),2 Oxidation (M) _PFDTVC(Carbamidomethyl (C))RC(Carbamidomethyl (C))M(Oxidation (M))M(Oxidation (M))_ ENST00000422717.1_1_9:32333457-32333676:-|nuORF 3.944395688203298 0.708391353636983 5 PP[TP]TY 6 -1 22.814 0.0 0.0 1.693 0.0 0.0 673.1694745091014 0.0 673.1694745091014 0.0 6.810070757400887 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.0 PP[TP]TY 1.693 - 146 + 1 2.303 56626.9 1.0 1610 3928 5539 SUDHL4_400M_050219_1,5540 SUDHL4_400M_050219_1,5540,PFDTVCRCMM False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5541 28.386 422.0 216810.0 25 0 16115.0 + 30908 RISGVDRYY 9 128 376.8644534257585 0 376.8644897341728 PEAK CID FTMS 0 0 0 5539 95704.59375 0.831539927219312 2 -0.0466041564941406 2 Unmodified _RISGVDRYY_ ENSG00000125356|ENST00000371437|NDUFA1 23.78978130925829 0.1667157386347964 5 D 1 8 6.9897 0.0 0.0 0.92983 0.0 0.0 136.44851307531331 497.2158830533817 633.664396128695 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.92983 + + 28 + 1 2.303 80166.6 1.0 1611 3928 5539 SUDHL4_400M_050219_1,5541 SUDHL4_400M_050219_1,5541,RISGVDRYY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5542 28.4 800.0 216130.0 25 0 42934.0 + 10437 FTEAERKAE 9 155 540.769241983988 1079.5239310347758 2 540.7681762576103 MULTI CID FTMS 0 0 0 5539 102187.2890625 0.8003229321934786 -1 0.0039997100830078 3 Unmodified _FTEAERKAE_ REV__ENSG00000168259|ENST00000457167|DNAJC7 38.17557092003332 0.0854718145212029 5 YQDETE 6 -1 48.083 0.0 0.0 4.4541 0.0 0.0 296.2110768048844 0.0 296.2110768048844 0.0 30.38032523080815 0.0 0.0 0 0.3054621874040891 0.0 0.805462187404089 0.5994850021680094 YQDETE 4.4541 - 854 1 2.303 135856.7 0.6499999761581421 1612 3928 5539 SUDHL4_400M_050219_1,5542 SUDHL4_400M_050219_1,5542,FTEAERKAE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5543 28.414 800.0 141310.0 25 0 52710.0 28457 PTEILCLKNL 10 94 572.3254116226223 0 572.3254882693291 PEAK CID FTMS 0 0 0 5539 83206.234375 0.6060939473110637 11 -0.1988525390625 4 Unmodified _PTEILCLKNL_ ENSG00000173988|ENST00000595396|LRRC63 6.723162845929126 0.3961065659209837 5 M 1 10 4.6041 0.0 0.0 0.40294 0.0 0.0 769.4933392591132 239.07923303775627 1008.5725722968696 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.40294 - 22 + 1 2.303 91096.2 0.6399999856948853 1613 3928 5539 SUDHL4_400M_050219_1,5543 SUDHL4_400M_050219_1,5543,PTEILCLKNL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5546 28.423 147.0 412370.0 25 0 27541.0 + 1292 AIRQQIESY 9 82 554.2937237540136 1106.5728945748272 2 554.2936279177666 MULTI CID FTMS 0 0 0 5545 281081.4375 0.5399873495143322 -7 0.0761451721191406 1 Unmodified _AIRQQIESY_ ENSG00000099956|ENST00000644036|SMARCB1;nc|ENSG00000099956|Q12824-2|SMARCB1 45.69961567697781 0.0497987121815769 5 [{I|L}A]RQQ{I|L}ESY 9 0 + 60.64 0.0 0.0 5.48 5.48 86.638 0.0 0.0 0.0 15.998709199930872 40.71842196392844 15.998709199930872 8.010299956639813 0 1.3807196863200843 1.3010299956639813 0.0 0.0 + + [{I|L}A]RQQ{I|L}ESY;[{I|L}A]RQQ{I|L}TDY;[{I|L}A]R[AG]Q{I|L}ESY;[{I|L}A]RQ[AG]{I|L}ESY;[{I|L}A]R[AG]Q{I|L}TDY;[{I|L}A]RQ[AG]{I|L}TDY;[{I|L}A]R[AG][AG]{I|L}ESY;{[QN]|[E{I|L}]|[KN]}{I|L}[TP]RESY;[QA][R{I|L}]Q{I|L}ESY;[{I|L}A]R[AG][AG]{I|L}TDY 5.48;4.7561;4.6478;4.6478;3.924;3.924;3.8197;3.5568;3.138;3.0958 +;-;-;-;-;-;-;-;-;- + 245 1 2.303 52081.6 1.0 1614 3930 5545 SUDHL4_400M_050219_1,5546 SUDHL4_400M_050219_1,5546,AIRQQIESY True True AIRQQIESY 28.423222 554.293627917767 2611675.0 5545.0 nc|ENSG00000099956|Q12824-2|SMARCB1;;ENSG00000099956|ENST00000644036|SMARCB1 6.44507360458374 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5547 28.429 297.0 324250.0 25 0 42410.0 + 17360 KLYRPGSVAY 10 114 577.32306995887 1152.6315869845398 2 577.3231689333916 MULTI CID FTMS 0 0 0 5545 296087.6875 0.9722229946579484 -2 0.0466041564941406 2 Unmodified _KLYRPGSVAY_ ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY 49.52724829834842 0.0829255630816734 5 {[QV]|[N{I|L}]|[RA]|[KV]}VH{I|L}[QP]VAY 10 6 + 40.57 0.0 0.0 3.5198 3.5198 85.498 0.0 0.0 0.0 5.39974850045234 10.35335007137462 5.39974850045234 18.971577658224664 0 1.0 0.6989700043360187 0.0 0.6747425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}VH{I|L}[QP]VAY;[K{I|L}][WM][TA]{I|L}KY;{[TV]|[{I|L}S]}[NP][YR]{I|L}KY;{[QV]|[N{I|L}]|[RA]|[KV]}[PS][YR]{I|L}KY;{[QD]|[EN]|[WG]|[KD]|[RS]}[PA][YR]{I|L}KY;[KA][DP][YR]{I|L}KY 3.5198;1.8738;1.8498;1.3275;0.78974;0.52857 -;-;-;-;-;- 142 1 2.303 75873.7 1.0 1615 3930 5545 SUDHL4_400M_050219_1,5547 SUDHL4_400M_050219_1,5547,KLYRPGSVAY True True KLYRPGSVAY 28.428672 577.323168933392 1807334.25 5545.0 ENSG00000131473|ENST00000352035|ACLY;;nc|ENSG00000131473|P53396-2|ACLY;;nc|ENSG00000131473|P53396-3|ACLY 7.479232311248779 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5548 28.432 173.0 361740.0 25 0 41698.0 20278 LLDRGEGSI 9 97 480.261817892003 958.509082850806 2 480.2621032595634 MULTI CID FTMS 0 0 0 5545 212340.953125 0.8573558695772315 1 -0.0142955780029296 3 Unmodified _LLDRGEGSI_ ENSG00000177673|ENST00000313965|TEX44 15.847184025352805 0.4077185912009129 5 {I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}KY 6 6 20.947 0.0 0.0 2.1853 0.0 0.0 0.0 221.1154420639498 221.1154420639498 1.2147820449879276 0.0 0.0 0.0 0 0.0 2.0 0.0 0.4247425010840047 {I|L}{I|L}{[C(Carbamidomethyl (C))G]|[NC]}KY 2.1853 - 155 1 2.303 52215.2 1.0 1616 3930 5545 SUDHL4_400M_050219_1,5548 SUDHL4_400M_050219_1,5548,LLDRGEGSI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5551 28.441 101.0 462550.0 25 0 43343.0 40878 VLQQRQTI 8 90 493.292889614005 984.57122629481 2 493.2921020388603 MULTI CID FTMS 0 0 0 5550 241156.109375 0.8554378476430717 1 -0.0424861907958984 1 Unmodified _VLQQRQTI_ ENSG00000125046|ENST00000544814|SSUH2;ENST00000413305.5_1_3:8661556-8676112:-|nuORF;ENST00000420394.5_1_3:8661556-8693727:-|nuORF;nc|ENSG00000125046|Q9Y2M2-1|SSUH2;nc|ENSG00000125046|Q9Y2M2-3|SSUH2 32.116972079565 0.368454113111938 5 [{I|L}T][RP]DG{I|L}T{I|L} 9 6 [{I|L}T][RP]DG{I|L} + + 20.802 4.3126 0.57316 2.1128 2.1128 53.01 0.0 0.0 0.0 0.0 0.9691001300805624 0.0 0.0 0 0.4247425010840047 0.0 0.2742275032520141 0.0 [{I|L}T][RP]DG{I|L}T{I|L} 2.1128 - 149 + 1 2.303 39992.3 1.0 1617 3932 5550 SUDHL4_400M_050219_1,5551 SUDHL4_400M_050219_1,5551,VLQQRQTI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5552 28.455 800.0 127120.0 25 0 14491.0 + 14855 ILGPSHPDTSY 11 112 593.7911712788963 1185.5677896245925 2 593.7904540896416 MULTI CID FTMS 0 0 0 5550 71653.03125 0.7625301841495012 1 -0.0424861907958984 2 Unmodified _ILGPSHPDTSY_ ENSG00000141965|ENST00000269856|FEM1A;ENSG00000145780|ENST00000274457|FEM1C 38.17557092003332 0.2405003631267018 5 {I|L}{I|L}G 3 8 48.94 0.0 0.0 4.128 0.0 0.0 0.0 899.3505343072874 899.3505343072874 15.184465535402296 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}{I|L}G 4.128 + + 109 + 1 2.303 80125.6 0.5799999833106995 1618 3932 5550 SUDHL4_400M_050219_1,5552 SUDHL4_400M_050219_1,5552,ILGPSHPDTSY False True ILGPSHPDTSY 28.45451 593.790454089642 603683.1875 5550.0 ENSG00000145780|ENST00000274457|FEM1C;;ENSG00000141965|ENST00000269856|FEM1A 6.99897305170695 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5553 28.468 800.0 50126.0 25 0 13493.0 -1 0 31 1196.8284211707455 3587.4634341124374 3 1197.495776355267 MULTI CID FTMS 0 0 0 5550 90141.90625 0.743158233323249 -5 0.0687541961669921 3 5 E 1 -1 6.9897 0.0 0.0 0.19484 0.0 0.0 2931.236278327836 524.1626070611936 3455.3988853890296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19484 - 1 + 1 2.303 42013.4 0.3899999856948852 1619 3932 5550 SUDHL4_400M_050219_1,5553 SUDHL4_400M_050219_1,5553, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5554 28.478 570.0 155950.0 25 0 18350.0 -1 LVMQYVPRP 9 117 559.8034761205818 1117.5923993079634 2 559.8040649294853 MULTI CID FTMS 0 0 0 5550 82020.21875 0.9106403729721324 -5 0.0687541961669921 4 Oxidation (M) _LVM(Oxidation (M))QYVPRP_ ENSG00000220948|ENST00000534741|TRIM51G 12.531546534597751 0.4974689918368763 5 TY 2 -1 19.464 0.0 0.0 1.7416 0.0 0.0 835.4703727960479 0.0 835.4703727960479 0.0 -2.393324630099869 -2.393324630099869 0.0 0 0.0 0.0 0.0 0.0 TY 1.7416 - 287 + 1 2.303 72175.3 1.0 1620 3932 5550 SUDHL4_400M_050219_1,5554 SUDHL4_400M_050219_1,5554,LVMQYVPRP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5556 28.483 66.0 1276400.0 25 0 149990.0 + 11536 GIPPAPRGV 9 82 432.25862846706417 862.5027040009284 2 432.2586852908134 MULTI CID FTMS 0 0 0 5555 534292.375 0.5289105449208847 6 -0.0916118621826171 1 Unmodified _GIPPAPRGV_ ENSG00000044574|ENST00000324460|HSPA5;ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000432228.1_1_2:222827655-222828180:+|nuORF;ENST00000509378.1_1_4:165110937-165111516:+|nuORF;ENST00000532091.1_1_11:122929265-122929517:-|nuORF;nc|ENSG00000204389|P0DMV8-2|HSPA1A 15.847184025352805 0.4077185912009129 5 {[VA]|[{I|L}G]}PPA 5 4 35.1 0.0 0.0 4.0695 0.0 0.0 0.0 424.2313326471313 424.2313326471313 35.09955584830828 0.0 0.0 0.0 0 0.2396518287104437 1.3979400086720375 0.0 0.0 + {[VA]|[{I|L}G]}PPA 4.0695 + + 16 + 1 2.303 70896.4 1.0 1621 3933 5555 SUDHL4_400M_050219_1,5556 SUDHL4_400M_050219_1,5556,GIPPAPRGV False True GIPPAPRGV 28.483164 432.258685290813 6618058.0 5555.0 ENSG00000109971|ENST00000534624|HSPA8;;ENSG00000126803|ENST00000247207|HSPA2;;ENST00000509378.1_1_4:165110937-165111516:+|nuORF;;ENSG00000044574|ENST00000324460|HSPA5;;ENST00000532091.1_1_11:122929265-122929517:-|nuORF;;ENSG00000173110|ENST00000309758|HSPA6;;ENSG00000204388|ENST00000375650|HSPA1B;;nc|ENSG00000204389|P0DMV8-2|HSPA1A;;ENST00000432228.1_1_2:222827655-222828180:+|nuORF;;ENSG00000204390|ENST00000375654|HSPA1L;;ENSG00000204389|ENST00000375651|HSPA1A;;ENSG00000113013|ENST00000297185|HSPA9;;ENST00000425843.1_1_X:120337248-120337797:-|nuORF 3.762971123059591 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5557 28.485 90.0 584010.0 25 0 96507.0 + 12248 GQYPTQPTY 9 80 527.7454617026201 1053.47637047204 2 527.7458984255791 MULTI CID FTMS 0 0 0 5555 568549.3125 0.0099616139242768 21 -0.3892173767089844 2 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 32.30548876998284 0.1201446275138228 5 [TP]QY 4 5 30.01 0.0 0.0 2.8487 0.0 0.0 0.0 561.2312282203401 561.2312282203401 6.6503780424059045 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.6989700043360187 0.0 [TP]QY 2.8487 - 155 1 2.303 46811.5 1.0 1622 3933 5555 SUDHL4_400M_050219_1,5557 SUDHL4_400M_050219_1,5557,GQYPTQPTY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5559 28.499 618.0 183680.0 25 0 40417.0 + 30907 RISGVDRYY 9 108 564.7937790087734 1127.5730050843467 2 564.7935668826103 MULTI CID FTMS 0 0 0 5558 123673.359375 0.2267047678863189 11 -0.2084064483642578 1 Unmodified _RISGVDRYY_ ENSG00000125356|ENST00000371437|NDUFA1 31.26834338654808 0.1333407332142048 5 RDD[K{I|L}]RYY 8 5 + 32.145 0.0 0.0 2.8508 2.8508 79.532 0.0 0.0 0.0 7.491596866368013 7.730012720637376 7.491596866368013 7.491596866368013 0 1.2302046884880935 0.0 0.0 0.0 RDD[K{I|L}]RYY;YY[HT]{I|L}{I|L}RY;RDD[K{I|L}]YRY;[TP]{[MG]|[TS]}[K{I|L}]RYY;[TP]{[MG]|[TS]}[K{I|L}]YRY;YK[EP]H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP];[VG]{I|L}[{M(Oxidation (M))|F}T]H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP];Y[TP]RH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP] 2.8508;2.1864;2.0545;1.7144;0.91809;0.66086;0.55616;0.46172 -;-;-;-;-;-;-;- 185 + 1 2.303 90932.7 1.0 1623 3934 5558 SUDHL4_400M_050219_1,5559 SUDHL4_400M_050219_1,5559,RISGVDRYY False True RISGVDRYY 28.498501 564.79356688261 6399387.65625 5558.0 ENSG00000125356|ENST00000371437|NDUFA1 6.008685111999512 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5560 28.5 89.0 865810.0 25 0 234780.0 -1 0 89 472.2739702277095 471.2666937611096 1 472.2742492556572 MULTI CID FTMS 0 0 0 5558 627634.9375 0.978344651860662 2 -0.0193691253662109 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.303 64271.3 1.0 1624 3934 5558 SUDHL4_400M_050219_1,5560 SUDHL4_400M_050219_1,5560, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5563 28.513 340.0 251250.0 25 0 27006.0 + 38567 TSYDWSSL 8 117 479.70938100293904 957.404209072678 2 479.7097350955009 MULTI CID FTMS 0 0 0 5562 147514.890625 0.8551081303698133 1 -0.0248470306396484 1 Unmodified _TSYDWSSL_ REV__nc|ENSG00000138653|Q9H3R1-2|NDST4 32.116972079565 0.368454113111938 5 [H{I|L}]PM 4 -1 16.699 0.0 0.0 1.7442 0.0 0.0 0.0 476.1397186764469 476.1397186764469 3.204482088348115 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [H{I|L}]PM 1.7442 - 112 1 2.303 71472.0 1.0 1625 3936 5562 SUDHL4_400M_050219_1,5563 SUDHL4_400M_050219_1,5563,TSYDWSSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5564 28.527 800.0 227320.0 25 0 20380.0 + 44316 YLNEQGDRVY 10 134 628.7993204370235 1255.584087940847 2 628.7984496951103 MULTI CID FTMS 0 0 0 5562 127234.4296875 0.2413742747955567 -8 0.133401870727539 2 Unmodified _YLNEQGDRVY_ ENSG00000182117|ENST00000328848|NOP10 75.5705956163825 0.0187571863157879 5 Y{I|L}NEQGDRVY 10 0 + 104.14 0.0 0.0 8.2938 8.2938 92.441 0.0 0.0 0.0 36.53212513775344 7.922329985214233 7.922329985214233 7.922329985214233 0 1.3737125054200234 2.0 0.7742275032520141 1.2302046884880935 + + Y{I|L}NEQGDRVY;Y{I|L}NEQGH{I|L}{[DA]|[EG]}P;Y{I|L}GGEQGDRVY;Y{I|L}NE[AG]GDRVY;Y{I|L}GGEQGH{I|L}{[DA]|[EG]}P;Y{I|L}NEQAHV{[DA]|[EG]}P;Y{I|L}NEQAH{I|L}[DG]P;Y{I|L}NE[AG]GH{I|L}{[DA]|[EG]}P;Y{I|L}NEYHVVGY;Y{I|L}N{M(Oxidation (M))|F}AQE{M(Oxidation (M))|F}QP 8.2938;7.6629;7.5639;7.5639;6.9358;6.8618;6.6988;6.5975;6.0594;5.3523 +;-;-;-;-;-;-;-;-;- + 2959 + 1 2.303 135525.9 0.6299999952316284 1626 3936 5562 SUDHL4_400M_050219_1,5564 SUDHL4_400M_050219_1,5564,YLNEQGDRVY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5565 28.529 110.0 647310.0 25 0 343030.0 -1 0 56 488.2679245418325 487.2606480752325 1 488.2676879763603 MULTI CID FTMS 0 0 0 5562 519187.09375 0.8544518291732732 7 -0.128173828125 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.303 62139.9 1.0 1627 3936 5562 SUDHL4_400M_050219_1,5565 SUDHL4_400M_050219_1,5565, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5567 28.537 289.0 262880.0 25 0 55770.0 -1 0 77 548.2913953210117 547.2841188544116 1 548.2914916872978 MULTI CID FTMS 0 0 0 5566 277038.75 0.8917419387805807 3 -0.0446701049804687 1 5 Q 1 -1 14.108 0.0 0.0 2.5779 0.0 0.0 401.2148419762851 0.0 401.2148419762851 0.0 2.998971100459734 0.0 0.0 0 0.0 0.0 0.0 0.1344005005252609 Q 2.5779 - 11 + 1 2.303 59976.3 1.0 1628 3937 5566 SUDHL4_400M_050219_1,5567 SUDHL4_400M_050219_1,5567, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5568 28.541 169.0 385080.0 25 0 38169.0 + 45151 YQEKGVRVL 9 92 364.545125449143 1090.613546947629 3 364.5450622439384 MULTI CID FTMS 0 0 0 5566 155803.96875 0.7493267750875333 -3 0.0442161560058593 2 Unmodified _YQEKGVRVL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 6.2057823575117 0.6980434486082533 5 Y 1 8 10.969 0.0 0.0 1.0058 0.0 0.0 909.5386090587602 0.0 909.5386090587602 0.0 0.7880392668083402 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.0058 + + 42 + 1 2.303 55277.5 1.0 1629 3937 5566 SUDHL4_400M_050219_1,5568 SUDHL4_400M_050219_1,5568,YQEKGVRVL False True YQEKGVRVL 28.540522 364.545062243938 1947452.5625 5566.0 ENSG00000138071|ENST00000260641|ACTR2;;nc|ENSG00000138071|P61160-2|ACTR2 0.9969465335210164 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5569 28.545 219.0 285610.0 25 0 15801.0 -1 HLCSCLPAI 9 110 535.7592475886139 1069.5039422440277 2 535.7597534060478 MULTI CID FTMS 0 0 0 5566 142170.421875 0.1862216852753812 -7 0.1116447448730468 3 2 Carbamidomethyl (C) _HLC(Carbamidomethyl (C))SC(Carbamidomethyl (C))LPAI_ ENST00000467926.5_1_22:21322139-21327873:+|nuORF 18.13498045792455 0.3457906370836843 5 EDT[WK]A{I|L} 7 -1 33.096 0.0 0.0 3.0946 0.0 0.0 208.08793990203395 0.0 208.08793990203395 0.0 5.833588662300571 0.0 0.0 0 1.7302046884880935 0.0 0.0 0.0 EDT[WK]A{I|L} 3.0946 - 165 + 1 2.303 52643.2 1.0 1630 3937 5566 SUDHL4_400M_050219_1,5569 SUDHL4_400M_050219_1,5569,HLCSCLPAI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5570 28.549 223.0 165290.0 25 0 15997.0 + 31146 RLPDDDPTAV 10 77 549.7749447285977 1097.5353365239953 2 549.7745239138603 MULTI CID FTMS 0 0 0 5566 155224.765625 0.0561056293305383 24 -0.4605236053466797 4 Unmodified _RLPDDDPTAV_ ENSG00000158623|ENST00000425248|COPG2 16.274544907608252 0.5744709547479872 5 DPTAV 5 5 30.362 0.0 0.0 2.7664 0.0 0.0 596.2906971662125 0.0 596.2906971662125 0.0 15.757659435244731 0.0 0.0 0 0.7742275032520141 0.0 0.8807196863200843 0.0 + DPTAV 2.7664 + + 31 1 2.303 32061.3 1.0 1631 3937 5566 SUDHL4_400M_050219_1,5570 SUDHL4_400M_050219_1,5570,RLPDDDPTAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5572 28.566 800.0 64483.0 25 0 15350.0 -1 0 33 1155.451440635416 3463.332492506448 3 1155.787524402142 MULTI CID FTMS 0 0 0 5571 101594.546875 0.4806924963543582 14 -0.2911491394042969 1 5 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.1149 0.0 0.0 2515.92259368008 797.3040865533811 3313.226680233461 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.1149 - 2 + 1 2.303 53442.5 0.4600000083446502 1632 3938 5571 SUDHL4_400M_050219_1,5572 SUDHL4_400M_050219_1,5572, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5573 28.57 201.0 282900.0 25 0 27235.0 + 17354 KLYDPGQQY 9 93 556.2748234559115 1110.5350939786229 2 556.2757446169853 MULTI CID FTMS 0 0 0 5571 203169.96875 1.0 0 0.0 2 Unmodified _KLYDPGQQY_ ENSG00000180448|ENST00000313093|ARHGAP45;ENST00000587602.5_1_19:1073185-1086002:+|nuORF;nc|ENSG00000180448|Q92619-2|ARHGAP45 34.40172386719151 0.1061884637610825 5 [{M(Oxidation (M))|F}V]{I|L}[WK]QQY 8 6 [{M(Oxidation (M))|F}V]{I|L}[WK]Q + + 26.722 7.4524 0.92991 2.4062 2.4062 53.282 0.0 0.0 0.0 0.0 11.40716615312624 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 [{M(Oxidation (M))|F}V]{I|L}[WK]QQY 2.4062 - 465 + 1 2.303 50304.9 1.0 1633 3938 5571 SUDHL4_400M_050219_1,5573 SUDHL4_400M_050219_1,5573,KLYDPGQQY True True KLYDPGQQY 28.569976 556.2734 1098074.875 5571.0 nc|ENSG00000180448|Q92619-2|ARHGAP45;;ENST00000587602.5_1_19:1073185-1086002:+|nuORF;;ENSG00000180448|ENST00000313093|ARHGAP45 6.5166754722595215 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5577 28.595 800.0 93401.0 25 0 7812.2 8638 EVEEDEYKAFY 11 123 711.3092682279964 1420.6039835227928 2 711.3072997927666 MULTI CID FTMS 0 0 0 5576 90200.8359375 0.8348027589246664 -3 0.0292510986328125 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 17.11289562659939 0.6791789249425932 5 EAQNQA[Y{M(Oxidation (M))|F}] 8 7 58.136 0.0 0.0 4.0924 0.0 0.0 451.180955955275 0.0 451.180955955275 0.0 42.65153777800478 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.8494850021680094 EAQNQA[Y{M(Oxidation (M))|F}] 4.0924 - 1066 1 2.303 56057.2 0.550000011920929 1634 3941 5576 SUDHL4_400M_050219_1,5577 SUDHL4_400M_050219_1,5577,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5578 28.599 225.0 242160.0 25 0 53831.0 37804 TLSNPRGWM 9 72 531.2642927933406 0 531.2639037966728 PEAK CID FTMS 0 0 0 5576 192331.546875 0.7670323293794701 4 -0.1154441833496093 2 Unmodified _TLSNPRGWM_ ENSG00000170927|ENST00000371117|PKHD1;nc|ENSG00000170927|P08F94-2|PKHD1 4.3292370932331545 0.3444685223463734 5 C(Carbamidomethyl (C)) 1 9 3.9794 0.0 0.0 0.37523 0.0 0.0 812.4244463271124 85.03004633121327 897.4544926583256 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.37523 - 2 + 1 2.303 47299.5 1.0 1635 3941 5576 SUDHL4_400M_050219_1,5578 SUDHL4_400M_050219_1,5578,TLSNPRGWM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5579 28.603 214.0 255990.0 25 0 38933.0 + -1 SLNPICRF 8 91 503.7627791655031 1005.511005397806 2 504.2642394900322 MULTI CID FTMS 0 0 0 5576 100970.6484375 0.9539866577243786 3 -0.0790176391601562 3 Carbamidomethyl (C) _SLNPIC(Carbamidomethyl (C))RF_ REV__ENST00000480000.5_1_22:39473321-39476968:+|nuORF 14.581692164780916 0.6954967302934248 5 {M(Oxidation (M))|F} 1 -1 16.99 0.0 0.0 1.6897 0.0 0.0 840.4319323771015 0.0 840.4319323771015 0.0 4.225490200071285 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.6897 + + 59 + 1 2.303 45667.2 1.0 1636 3941 5576 SUDHL4_400M_050219_1,5579 SUDHL4_400M_050219_1,5579,SLNPICRF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5581 28.608 94.0 461550.0 25 0 40500.0 + 26268 NQMPTQPQV 9 73 521.7532026909945 1041.491852448789 2 521.7533447146416 MULTI CID FTMS 0 0 0 5580 477652.96875 0.3487128903968578 10 -0.2372207641601562 1 Unmodified _NQMPTQPQV_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 39.957323273325 0.0756908302845263 5 PQV 3 6 17.744 0.0 0.0 1.7038 0.0 0.0 699.3018476230571 0.0 699.3018476230571 0.0 1.4899930416717844 0.0 0.0 0 0.5 0.0 0.0 0.7302046884880937 + PQV 1.7038 + + 36 + 1 2.303 44818.4 1.0 1637 3942 5580 SUDHL4_400M_050219_1,5581 SUDHL4_400M_050219_1,5581,NQMPTQPQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5582 28.61 99.0 594740.0 25 0 63868.0 + -1 AQAPDLQRV 9 85 499.2753721626221 498.2680956960221 1 499.2749511599541 MULTI CID FTMS 0 0 0 5580 564786.5625 0.1248862746099588 -19 0.2612133026123047 2 ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-4|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2 5 [QA]A 3 -1 12.007 0.0 0.0 2.4098 0.0 0.0 0.0 225.11224787791585 225.11224787791585 12.007046801327734 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 [QA]A 2.4098 - 6 1 2.303 51923.4 1.0 1638 3942 5580 SUDHL4_400M_050219_1,5582 SUDHL4_400M_050219_1,5582, False False AQAPDLQRV 28.609736 499.274951159954 45302608.0 5580.0 ENSG00000111641|ENST00000322166|NOP2;;nc|ENSG00000111641|P46087-4|NOP2;;nc|ENSG00000111641|P46087-2|NOP2;;nc|ENSG00000111641|P46087-3|NOP2 4.277849197387695 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5583 28.613 187.0 305380.0 25 0 20257.0 + 1665 ALNPESEQY 9 98 525.7408711833446 1049.467189433489 2 525.7404662966728 MULTI CID FTMS 0 0 0 5580 279224.9375 0.7484740598126 -1 0.0246772766113281 3 Unmodified _ALNPESEQY_ ENSG00000084774|ENST00000264705|CAD 27.22323531849824 0.1848086127304535 5 [EP]SEQ 5 4 24.96 0.0 0.0 2.3784 0.0 0.0 0.0 476.21570132044377 476.21570132044377 -0.7680057975073069 0.0 -0.7680057975073069 0.0 0 0.0 0.958607314841775 0.6421590589602533 0.0 + [EP]SEQ 2.3784 + + 296 1 2.303 49420.0 1.0 1639 3942 5580 SUDHL4_400M_050219_1,5583 SUDHL4_400M_050219_1,5583,ALNPESEQY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5584 28.623 541.0 355690.0 25 0 64323.0 + 3124 AVPPALRGP 9 136 439.2665232806816 876.5184936281631 2 439.2667114138603 MULTI CID FTMS 0 0 0 5580 152770.1875 0.0232204697834071 -8 0.1176395416259765 4 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 5 {[VA]|[{I|L}G]}PPA 5 -1 43.085 0.0 0.0 4.9155 0.0 0.0 0.0 438.24683787247216 438.24683787247216 29.924843744914607 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.9155 + + 56 + 1 2.303 149092.0 1.0 1640 3942 5580 SUDHL4_400M_050219_1,5584 SUDHL4_400M_050219_1,5584,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5585 28.633 561.0 195540.0 25 0 15746.0 + + 39393 KIGQPTVSY 9 132 496.7751498835692 0 496.7745544314384 PEAK CID FTMS 0 0 0 5580 96840.53125 0.4920410235174529 -2 0.0287532806396484 5 Unmodified _VAKQLSPSY_ nc|ENSG00000174547|Q9Y3B7-2|MRPL11;nc|ENSG00000174547|Q9Y3B7-3|MRPL11;ENST00000524576.5_1_11:66203480-66233392:-|nuORF;ENSG00000174547|ENST00000310999|MRPL11 54.773552608820026 0.0223190572393154 5 SVKSP 5 -1 27.536 0.0 0.0 2.7771 0.0 0.0 181.076430287232 309.1563814752563 490.23281176248827 0.0 0.0 0.0 0.0 0 1.3935078169319297 0.0 1.305462187404089 0.0 SVKSP 2.7771 - 216 + 1 2.303 86062.5 1.0 1641 3942 5580 SUDHL4_400M_050219_1,5585 SUDHL4_400M_050219_1,5585,VAKQLSPSY False False KIGQPTVSY 28.632682 496.774554431438 1106729.625 5580.0 nc|ENSG00000174547|Q9Y3B7-2|MRPL11;;nc|ENSG00000174547|Q9Y3B7-3|MRPL11;;ENST00000524576.5_1_11:66203480-66233392:-|nuORF;;ENSG00000174547|ENST00000310999|MRPL11 5.066586971282959 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5587 28.639 95.0 552540.0 25 0 95271.0 + 44146 YLDPAQRGV 9 56 509.769635505208 1017.524718077216 2 509.7697021365166 MULTI CID FTMS 0 0 0 5586 500314.875 0.0843547391521479 18 -0.3571968078613281 1 Unmodified _YLDPAQRGV_ ENSG00000130731|ENST00000301686|METTL26;ENST00000448973.6_1_16:685849-686290:-|nuORF;nc|ENSG00000130731|Q96S19-2|METTL26;nc|ENSG00000130731|Q96S19-3|METTL26;nc|ENSG00000130731|Q96S19-4|METTL26;nc|ENSG00000130731|Q96S19-5|METTL26;nc|ENSG00000130731|Q96S19-6|METTL26 30.63653989081413 0.1413794767160703 5 [Y{I|L}]DPAQ 6 3 61.911 0.0 0.0 6.0845 0.0 0.0 0.0 327.1786287897094 327.1786287897094 47.93182501400722 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.4247425010840047 + [Y{I|L}]DPAQ 6.0845 + + 27 + 1 2.316 47544.3 1.0 1642 3943 5586 SUDHL4_400M_050219_1,5587 SUDHL4_400M_050219_1,5587,YLDPAQRGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5588 28.652 800.0 92398.0 25 0 14072.0 + -1 QFQLDMCMWM 10 98 674.7627224116789 1347.5108918901576 2 674.7635375857353 MULTI CID FTMS 0 0 0 5586 76668.296875 0.1317523052762024 24 -0.5124092102050781 2 Oxidation (M) _QFQLDM(Oxidation (M))CMWM_ REV__ENST00000549838.5_2_14:32068516-32068552:+|nuORF 3.5964929083625545 0.7100006075494749 5 TY 2 -1 18.594 0.0 0.0 1.3799 0.0 0.0 1065.389353659492 0.0 1065.389353659492 0.0 6.715240374779091 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 TY 1.3799 - 246 + 1 2.316 59299.2 0.5299999713897705 1643 3943 5586 SUDHL4_400M_050219_1,5588 SUDHL4_400M_050219_1,5588,QFQLDMCMWM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5589 28.654 88.0 621830.0 25 0 91549.0 + 33625 SIREAGGAF 9 74 454.2353065517221 906.4560601702442 2 454.2351257205009 MULTI CID FTMS 0 0 0 5586 425712.4375 0.615001584138999 -4 0.062723159790039 3 Unmodified _SIREAGGAF_ ENSG00000130770|ENST00000335514|ATP5IF1;nc|ENSG00000130770|Q9UII2-2|ATP5IF1;nc|ENSG00000130770|Q9UII2-3|ATP5IF1 23.78978130925829 0.2284941198415988 5 VV{[WT]|[RM]}QGA{M(Oxidation (M))|F} 8 5 VV{[WT]|[RM]}QG + + 29.464 -9.8328 -1.4668 3.2505 3.2505 54.611 0.0 0.0 0.0 0.0 21.989700043360187 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 VV{[WT]|[RM]}QGA{M(Oxidation (M))|F} 3.2505 - 60 + 1 2.316 47848.9 1.0 1644 3943 5586 SUDHL4_400M_050219_1,5589 SUDHL4_400M_050219_1,5589,SIREAGGAF False True SIREAGGAF 28.65444 454.2357 3372360.5 5586.0 ENSG00000130770|ENST00000335514|ATP5IF1;;nc|ENSG00000130770|Q9UII2-3|ATP5IF1;;nc|ENSG00000130770|Q9UII2-2|ATP5IF1 3.79867434501648 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5590 28.657 134.0 414600.0 25 0 56563.0 16079 ITPSSSPSPV 10 84 486.255198508216 970.495844083232 2 486.2537719607353 MULTI CID FTMS 0 0 0 5586 262103.78125 0.2384622737381856 35 -0.6985301971435547 4 Unmodified _ITPSSSPSPV_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 17.11289562659939 0.5604042439455784 5 [{I|L}T]P 3 7 31.879 0.0 0.0 3.2848 0.0 0.0 0.0 656.2875460260374 656.2875460260374 10.465978039238736 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + [{I|L}T]P 3.2848 + + 115 + 1 2.316 50680.8 1.0 1645 3943 5586 SUDHL4_400M_050219_1,5590 SUDHL4_400M_050219_1,5590,ITPSSSPSPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5592 28.666 337.0 225090.0 25 0 38422.0 + + 33676 GIREEEVSY 9 92 541.2622693434294 1080.5099857536586 2 541.2622558474541 MULTI CID FTMS 0 0 0 5591 99156.1640625 0.5787605721252944 4 -0.0993061065673828 1 Unmodified _SIWLEPSSY_ nc|ENSG00000090989|Q9NV70-2|EXOC1;ENST00000506936.1_1_4:56768485-56770658:+|nuORF;ENSG00000090989|ENST00000381295|EXOC1 28.486842064014134 0.1687311288560894 5 {[QN]|[E{I|L}]|[KN]}[WR]EVSY 8 -1 + 46.731 0.0 0.0 4.3249 4.3249 86.017 0.0 0.0 0.0 4.770804348753082 36.809414362315565 4.770804348753082 9.771212547196626 0 1.0 1.3979400086720375 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[WR]EVSY;{[QN]|[E{I|L}]|[KN]}[WR]ESVY;{[QN]|[E{I|L}]|[KN]}[WR]TVDY;{[QN]|[E{I|L}]|[KN]}[WR]EWY;{[QN]|[E{I|L}]|[KN]}[WR]TDVY;[HM]VR[YN]VY;{[TV]|[{I|L}S]}[WH][YN]VY;[MT][WR][{I|L}P]DY;[MT][WR][EP]VY 4.3249;3.4206;3.305;3.2689;3.142;1.948;1.5223;0.75162;0.58865 -;-;-;-;-;-;-;-;- 125 1 2.316 66091.9 1.0 1646 3944 5591 SUDHL4_400M_050219_1,5592 SUDHL4_400M_050219_1,5592,SIWLEPSSY False False GIREEEVSY 28.6658 541.262255847454 780894.5625 5591.0 nc|ENSG00000090989|Q9NV70-2|EXOC1;;ENST00000506936.1_1_4:56768485-56770658:+|nuORF;;ENSG00000090989|ENST00000381295|EXOC1 -0.0286746819814046 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5593 28.674 467.0 248940.0 25 0 24461.0 14126 IAVIYGRY 8 112 477.77217115231184 953.5297893714236 2 477.7717468142509 MULTI CID FTMS 0 0 0 5591 110615.296875 0.1432288218824928 -7 0.1277637481689453 2 Unmodified _IAVIYGRY_ ENSG00000135776|ENST00000344517|ABCB10 26.34127834903884 0.4900704351052977 5 {I|L}AVDP 5 5 61.938 0.0 0.0 6.4957 0.0 0.0 0.0 455.23574505218966 455.23574505218966 43.52182518111363 0.0 0.0 0.0 0 1.1989700043360187 1.6989700043360187 0.0 0.0 {I|L}AVDP 6.4957 - 118 + 1 2.316 93191.3 1.0 1647 3944 5591 SUDHL4_400M_050219_1,5593 SUDHL4_400M_050219_1,5593,IAVIYGRY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5594 28.688 800.0 75792.0 25 0 6096.6 + 8944 FAMNDESVFY 10 102 611.7600588805655 1221.5055648279308 2 611.7610961794853 MULTI CID FTMS 0 0 0 5591 80537.921875 1.0 0 0.0 3 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 15.847184025352805 0.5816416552707754 5 QQNA{M(Oxidation (M))|F}Y 6 -1 38.148 0.0 0.0 3.1231 0.0 0.0 452.1653004376969 0.0 452.1653004376969 0.0 21.15865011156764 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.3807196863200844 QQNA{M(Oxidation (M))|F}Y 3.1231 - 149 1 2.316 52116.2 0.5299999713897705 1648 3944 5591 SUDHL4_400M_050219_1,5594 SUDHL4_400M_050219_1,5594,FAMNDESVFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5595 28.694 310.0 239740.0 25 0 18056.0 + -1 QYMLVVIIP 9 104 546.3128344625542 1090.6111159919085 2 546.3135253787041 MULTI CID FTMS 0 0 0 5591 166213.4375 0.9431379907823446 4 -0.0993061065673828 4 Oxidation (M) _QYM(Oxidation (M))LVVIIP_ REV__ENSG00000196367|ENST00000456197|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5|TRRAP 7.910154910731844 0.6385446671287552 5 KE{[WS]|[C(Carbamidomethyl (C)){I|L}]} 4 -1 19.693 0.0 0.0 1.8057 0.0 0.0 542.3555775373062 0.0 542.3555775373062 0.0 7.474250108400469 0.0 0.0 0 0.5 0.0 0.0 0.0 KE{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.8057 - 72 1 2.316 62877.9 1.0 1649 3944 5591 SUDHL4_400M_050219_1,5595 SUDHL4_400M_050219_1,5595,QYMLVVIIP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5598 28.703 40.0 1739300.0 25 0 316230.0 + 37174 TIDPNTRTL 9 82 515.7803383567924 1029.5461237803847 2 515.7802001833916 MULTI CID FTMS 0 0 0 5597 981418.75 0.2862662496527112 -3 0.0648994445800781 1 Unmodified _TIDPNTRTL_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 15.248480904072842 0.4239247793462406 5 [{I|L}T]DPN 5 4 46.95 0.0 0.0 4.5603 0.0 0.0 0.0 486.2682283990844 486.2682283990844 42.346368802282015 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + [{I|L}T]DPN 4.5603 + + 98 + 1 2.327 61813.0 1.0 1650 3946 5597 SUDHL4_400M_050219_1,5598 SUDHL4_400M_050219_1,5598,TIDPNTRTL False True TIDPNTRTL 28.702642 515.780200183392 14532454.0 5597.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 3.5753819147745767 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5599 28.704 69.0 471200.0 25 0 72121.0 + 33813 SLDQPTQTV 9 56 494.75054870454414 0 494.7507202029228 PEAK CID FTMS 0 0 0 5597 456040.15625 1.0 0 0.0 2 Unmodified _SLDQPTQTV_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 24.020572477871973 0.1646235280836931 5 QDE 3 8 13.984 0.0 0.0 1.4162 0.0 0.0 544.284500874129 68.0512941949828 612.3357950691118 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 QDE 1.4162 - 53 + 1 2.327 36164.3 1.0 1651 3946 5597 SUDHL4_400M_050219_1,5599 SUDHL4_400M_050219_1,5599,SLDQPTQTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5600 28.707 126.0 466600.0 25 0 34183.0 + 26458 NTIDPSHPM 9 100 506.2317880446003 1010.4490231560006 2 506.2317077517509 MULTI CID FTMS 0 0 0 5597 331890.78125 1.0 0 0.0 3 Unmodified _NTIDPSHPM_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 32.30548876998284 0.1201446275138228 5 {[QS]|[NT]}{I|L}DPSH{NN|[MP]|[D{I|L}]|[EV]} 9 0 + 60.493 0.0 0.0 5.9867 5.9867 92.661 0.0 0.0 0.0 41.30674456733729 10.400217704352457 10.400217704352457 19.35653019193517 0 0.3807196863200844 2.0 0.3252574989159953 0.0 + + {[QS]|[NT]}{I|L}DPSH{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}[{M(Oxidation (M))|F}V]{I|L}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}[YT][DG]{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}{I|L}DP{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[MS]|[{M(Oxidation (M))|F}A]};{[QS]|[NT]}[{M(Oxidation (M))|F}V][R{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}{I|L}[WM]E{[MS]|[{M(Oxidation (M))|F}A]};{[QS]|[NT]}[YT]{I|L}[DG]{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}[YT]S[TP]{NN|[MP]|[D{I|L}]|[EV]};{[QS]|[NT]}[YT]{[RE]|[WV]}{NN|[MP]|[D{I|L}]|[EV]};{[NV]|[RG]}{[ET]|[MV]}PSH{NN|[MP]|[D{I|L}]|[EV]} 5.9867;4.0711;2.9135;2.8195;2.4345;2.323;2.0772;2.0772;1.9082;1.775 +;-;-;-;-;-;-;-;-;- + 378 + 1 2.327 48714.0 1.0 1652 3946 5597 SUDHL4_400M_050219_1,5600 SUDHL4_400M_050219_1,5600,NTIDPSHPM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5601 28.721 800.0 256380.0 25 0 20148.0 + 2137 APVPAPERK 9 174 482.78254716373465 963.5505413942692 2 482.7826721072197 MULTI CID FTMS 0 0 0 5597 208979.84375 0.0772099056747549 33 -0.6937484741210938 4 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 32.30548876998284 0.1201446275138228 5 APAPV 5 -1 71.498 0.0 0.0 7.4203 0.0 0.0 0.0 525.2790628328842 525.2790628328842 49.35795955899096 0.0 0.0 0.0 0 1.6549471895720984 1.6989700043360187 0.0 0.0 APAPV 7.4203 - 309 + 1 2.327 160488.7 0.7900000214576721 1653 3946 5597 SUDHL4_400M_050219_1,5601 SUDHL4_400M_050219_1,5601,APVPAPERK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5602 28.724 179.0 351470.0 25 0 29983.0 + 41304 VPHTRPVSL 9 89 503.2953953477962 1004.5762377623925 2 503.2957946658134 MULTI CID FTMS 0 0 0 5597 175175.03125 1.0 0 0.0 5 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 24.020572477871973 0.2255576514309169 5 VPH 3 6 44.314 0.0 0.0 4.4112 0.0 0.0 0.0 668.3733196765952 668.3733196765952 32.09544243948811 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 + VPH 4.4112 + + 56 + 1 2.327 53998.7 1.0 1654 3946 5597 SUDHL4_400M_050219_1,5602 SUDHL4_400M_050219_1,5602,VPHTRPVSL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5603 28.738 800.0 68642.0 25 0 5094.7 + -1 SRPDSILGMQF 11 98 633.8113347714492 1265.6081166096983 2 633.8115112185478 MULTI CID FTMS 0 0 0 5597 117503.6953125 0.9081630299423528 1 -0.0403671264648437 6 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 20.41453444215458 0.6105011870913812 5 [KQ]{I|L}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 [KQ]{I|L}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A + + 25.277 4.4293 0.53661 1.9972 1.9972 52.93 0.0 0.0 0.0 0.0 11.781993496232497 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.6643943297944485 [KQ]{I|L}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 1.9972 - 180 + 1 2.327 46736.7 0.6600000262260437 1655 3946 5597 SUDHL4_400M_050219_1,5603 SUDHL4_400M_050219_1,5603,SRPDSILGMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5605 28.743 69.0 600510.0 25 0 56599.0 + 12249 GQYPTQPTY 9 75 527.7455456158206 1053.476538298441 2 527.7458373904228 MULTI CID FTMS 0 0 0 5604 569413.4375 0.363588520924364 1 -0.0184764862060546 1 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 26.88365393820708 0.1891292719743517 5 [TP]QY 4 5 33.9 0.0 0.0 3.218 0.0 0.0 0.0 561.2307856951785 561.2307856951785 9.475760167779868 0.0 0.0 0.0 0 0.0 1.154901959985743 1.066901560044258 0.0 [TP]QY 3.218 - 120 1 2.327 42158.1 1.0 1656 3947 5604 SUDHL4_400M_050219_1,5605 SUDHL4_400M_050219_1,5605,GQYPTQPTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5606 28.745 109.0 467550.0 25 0 41074.0 + 7066 EELKSHQV 8 82 485.2537926691107 968.4930324050214 2 485.2536804080009 MULTI CID FTMS 0 0 0 5604 168720.234375 0.3215209229135506 1 -0.0184764862060546 2 Unmodified _EELKSHQV_ REV__ENSG00000109943|ENST00000227348|CRTAM;REV__nc|ENSG00000109943|O95727-2|CRTAM 24.67388899826682 0.525179942228231 5 EEAP 4 -1 35.177 0.0 0.0 3.6322 0.0 0.0 0.0 539.294108170512 539.294108170512 23.187587626244124 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 EEAP 3.6322 - 69 + 1 2.327 46699.6 1.0 1657 3947 5604 SUDHL4_400M_050219_1,5606 SUDHL4_400M_050219_1,5606,EELKSHQV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5607 28.747 74.0 747640.0 25 0 94738.0 + 45538 YTYTSKAL 8 84 473.7481305906808 945.4817082481616 2 473.7476989626884 MULTI CID FTMS 0 0 0 5604 444278.59375 0.8018304086680546 -2 0.044403076171875 3 Unmodified _YTYTSKAL_ ENSG00000172578|ENST00000341319|KLHL6;ENST00000487643.1_1_3:183240843-183262455:-|nuORF;ENST00000489245.5_1_3:183211997-183273441:-|nuORF 25.399314129420983 0.5099049743284904 5 [YT]YTSKA{I|L} 8 0 + 44.997 0.0 0.0 4.7592 4.7592 84.882 0.0 0.0 0.0 6.723576822074577 5.762136704289439 5.762136704289439 8.997706447588882 0 0.3807196863200844 2.0 0.0 0.0 + + [YT]YTSKA{I|L};[YT][KS]ATY{I|L};[KS]TAYTY{I|L};[YT][HA][WR]{I|L};[KS]TYATY{I|L};[KS]ATYTY{I|L} 4.7592;3.8075;2.718;2.6761;2.4479;2.0812 +;-;-;-;-;- + 179 + 1 2.327 48585.3 1.0 1658 3947 5604 SUDHL4_400M_050219_1,5607 SUDHL4_400M_050219_1,5607,YTYTSKAL False True YTYTSKAL 28.746785 473.747698962688 2448951.5 5604.0 ENST00000487643.1_1_3:183240843-183262455:-|nuORF;;ENST00000489245.5_1_3:183211997-183273441:-|nuORF;;ENSG00000172578|ENST00000341319|KLHL6 3.8985550006230674 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5608 28.751 220.0 415420.0 25 0 44566.0 + 17149 KLIDRTESL 9 89 537.8113063677761 1073.608059802352 2 537.8115112185478 MULTI CID FTMS 0 0 0 5604 271150.84375 0.3824379763325366 -3 0.0808296203613281 4 Unmodified _KLIDRTESL_ ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1 46.0223103267499 0.0490911897871712 5 K{I|L}{I|L}D{M(Oxidation (M))|F} 5 5 56.568 0.0 0.0 5.269 0.0 0.0 0.0 454.2364901178344 454.2364901178344 41.7478773067036 0.0 0.0 0.0 0 1.25 0.0 0.8494850021680094 0.0 K{I|L}{I|L}D{M(Oxidation (M))|F} 5.269 - 50 + 1 2.327 76362.6 1.0 1659 3947 5604 SUDHL4_400M_050219_1,5608 SUDHL4_400M_050219_1,5608,KLIDRTESL True True KLIDRTESL 28.750945 537.812 2867314.25 5604.0 ENSG00000130592|ENST00000311604|LSP1;;nc|ENSG00000130592|P33241-3|LSP1;;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;;nc|ENSG00000130592|P33241-2|LSP1 4.345018307367961 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5609 28.756 300.0 225770.0 25 0 19603.0 + -1 LADMHTPSCC 10 111 547.2088147529953 1092.4030765727905 2 547.2086669802666 MULTI CID FTMS 0 0 0 5604 156450.890625 0.8254410789632681 -2 0.044403076171875 5 Oxidation (M) _LADM(Oxidation (M))HTPSCC_ REV__ENSG00000176160|ENST00000323777|HSF5;REV__nc|ENSG00000176160|Q4G112-2|HSF5 6.723162845929126 0.6955379296933136 5 [{I|L}A]D 3 -1 29.309 0.0 0.0 2.683 0.0 0.0 0.0 790.2333468072874 790.2333468072874 12.882418650521355 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]D 2.683 + + 161 + 1 2.327 56307.0 1.0 1660 3947 5604 SUDHL4_400M_050219_1,5609 SUDHL4_400M_050219_1,5609,LADMHTPSCC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5611 28.773 800.0 151610.0 25 0 13861.0 + -1 GSGSGWSSSRGPY 13 119 642.7865179400674 1283.5584829469346 2 642.7839233279228 MULTI CID FTMS 0 0 0 5610 95360.8671875 0.908811100694039 1 -0.02911376953125 1 Carbamidomethyl (C) _KC(Carbamidomethyl (C))NECEKVFQ_ ENSG00000197915|ENST00000368801|HRNR;Q86YZ3 11.494710602746466 0.654671931888957 5 [SG]GSGW[R{M(Oxidation (M))|F}]NGPY 12 -1 + 47.622 0.0 0.0 3.7101 3.7101 77.578 0.0 0.0 0.0 3.104542099101579 3.104542099101579 3.104542099101579 3.104542099101579 0 2.432233306928365 0.8538719643217619 1.5743923658886183 0.0 [SG]GSGW[R{M(Oxidation (M))|F}]NGPY;[NS]SGWS{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}YQ;[NS]SGWE[WK]YQ;[NS]SGWS{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}QY;[NS]SGWE[WK]QY;[NS]SGWE[NS]{I|L}YQ;[NS]SGWS{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GAY;[NS]SGWS{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GS{M(Oxidation (M))|F};[NS]SGWE[WK]GAY;[NS]SGWE[WK]GS{M(Oxidation (M))|F} 3.7101;3.4683;3.425;3.2337;3.1905;3.1582;3.1426;3.1426;3.0965;3.0965 -;-;-;-;-;-;-;-;-;- 1275 1 2.327 90009.4 0.5899999737739563 1661 3948 5610 SUDHL4_400M_050219_1,5611 SUDHL4_400M_050219_1,5611,KCNECEKVFQ False False GSGSGWSSSRGPY 28.772833 642.783923327923 600325.0 5610.0 ENSG00000197915|ENST00000368801|HRNR;;Q86YZ3 7.152311484018962 2.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5612 28.776 173.0 346960.0 25 0 58233.0 -1 NQKDGMVSF 9 99 521.236563920534 1040.4585749078678 2 521.2370483279228 MULTI CID FTMS 0 0 0 5610 98007.4296875 0.6389012363309233 -1 0.0184764862060546 2 Oxidation (M) _NQKDGM(Oxidation (M))VSF_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 10.823927491677226 0.5436922275383211 5 QS{M(Oxidation (M))|F} 3 -1 19.041 0.0 0.0 1.8301 0.0 0.0 660.282288142046 0.0 660.282288142046 0.0 6.81749681984066 0.0 0.0 0 0.0 0.0 0.0 0.0 QS{M(Oxidation (M))|F} 1.8301 - 59 + 1 2.327 55564.9 1.0 1662 3948 5610 SUDHL4_400M_050219_1,5612 SUDHL4_400M_050219_1,5612,NQKDGMVSF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5613 28.78 227.0 277660.0 25 0 23619.0 + -1 AMRPGLEGY 9 105 505.2422674442379 1008.4699819552758 2 505.2416564822197 MULTI CID FTMS 0 0 0 5610 95972.359375 0.6213921635298604 -4 0.0993061065673828 3 Oxidation (M) _AM(Oxidation (M))RPGLEGY_ ENSG00000100297|ENST00000216122|MCM5 18.1463463914782 0.3454829746528889 5 QHGY 4 -1 40.433 0.0 0.0 4.0093 0.0 0.0 505.2700672834 0.0 505.2700672834 0.0 26.620768972555595 0.0 0.0 0 1.0 0.0 0.0 0.0 QHGY 4.0093 - 159 1 2.327 52480.1 1.0 1663 3948 5610 SUDHL4_400M_050219_1,5613 SUDHL4_400M_050219_1,5613,AMRPGLEGY False False AMRPGLEGY 28.780479 505.24165648222 1194581.0 5610.0 ENSG00000100297|ENST00000216122|MCM5 2.805372754732768 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5614 28.786 276.0 193310.0 25 0 68621.0 -1 0 66 512.2676040489148 511.2603275823148 1 512.2675048708916 MULTI CID FTMS 0 0 0 5610 106404.734375 0.7420256979908033 4 -0.0835742950439453 4 5 Y 1 -1 14.604 0.0 0.0 2.8565 0.0 0.0 330.1858932334851 0.0 330.1858932334851 0.0 0.2460901133509097 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.8565 - 9 + 1 2.327 47165.7 1.0 1664 3948 5610 SUDHL4_400M_050219_1,5614 SUDHL4_400M_050219_1,5614, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5616 28.798 496.0 150890.0 25 0 17995.0 + 44317 YLNEQGDRVY 10 93 628.7993204370235 1255.584087940847 2 628.7997314333916 MULTI CID FTMS 0 0 0 5615 116376.75 0.220776355136785 5 -0.0820255279541015 1 Unmodified _YLNEQGDRVY_ ENSG00000182117|ENST00000328848|NOP10 67.83816525789305 0.0190062514522628 5 Y{I|L}NEQGD[RV]Y 10 0 + 90.998 0.0 0.0 7.2475 7.2475 89.124 0.0 0.0 0.0 76.61481637459161 3.1437180047066 3.1437180047066 5.077055386295967 0 0.7302046884880937 2.0 0.7059771852360797 1.2302046884880935 + + Y{I|L}NEQGD[RV]Y;Y{I|L}NEQGH{[CP]|[EA]}[VP];Y{I|L}GGEQGD[RV]Y;Y{I|L}NE[AG]GD[RV]Y;Y{I|L}GGEQGH{[CP]|[EA]}[VP];Y{I|L}NE[AG]GH{[CP]|[EA]}[VP];Y{I|L}N[WQ]H{[CP]|[EA]}[VP];[Y{I|L}]N[{I|L}P][C(Carbamidomethyl (C))S]D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QN]|[E{I|L}]|[KN]}[PG][WH]QD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[RH]DQ[WH][KS]Y 7.2475;6.8431;6.5175;6.5175;6.1161;5.7778;4.4684;1.4625;0.28602;0.12345 +;-;-;-;-;-;-;-;-;- + 456 + 1 2.333 61042.8 1.0 1665 3949 5615 SUDHL4_400M_050219_1,5616 SUDHL4_400M_050219_1,5616,YLNEQGDRVY True True YLNEQGDRVY 28.798218 628.799731433392 4658249.0 5615.0 ENSG00000182117|ENST00000328848|NOP10 7.864956537882487 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5617 28.8 63.0 1176700.0 25 0 150310.0 + 31333 RMLPHAPGV 9 70 489.2711233229616 976.5276937127232 2 489.2710754275322 MULTI CID FTMS 0 0 0 5615 718725.625 0.0685677217343055 -12 0.2561836242675781 2 Unmodified _RMLPHAPGV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 39.957323273325 0.0756908302845263 5 {[WT]|[RM]}{I|L}PHAPGV 9 0 + 46.929 0.0 0.0 4.8057 4.8057 87.438 0.0 0.0 0.0 6.7074145675533 30.528871982441352 6.7074145675533 9.488474775526186 0 1.1989700043360187 0.0 0.0 0.3054621874040891 + + {[WT]|[RM]}{I|L}PHAPGV;{[WT]|[RM]}{I|L}AYAPR;[TA]VA{M(Oxidation (M))|F}Q{[QN]|[E{I|L}]|[KN]}V;{[WT]|[RM]}{I|L}PH[QP]V;[TA]V{[TV]|[{I|L}S]}YAPGV;[TA]V{[TV]|[{I|L}S]}Y[QP]V;[TA]VA{M(Oxidation (M))|F}[AG]{[QN]|[E{I|L}]|[KN]}V;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]SEPR 4.8057;3.834;3.4806;3.4265;3.2066;2.8459;2.5376;1.5703 +;-;-;-;-;-;-;- + 192 1 2.333 62032.0 1.0 1666 3949 5615 SUDHL4_400M_050219_1,5617 SUDHL4_400M_050219_1,5617,RMLPHAPGV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5618 28.814 800.0 33636.0 25 0 3852.6 -1 0 51 1123.368302119317 3367.0830769581507 3 1123.702807605267 MULTI CID FTMS 0 0 0 5615 92003.375 0.856896354634969 -3 0.0879573822021484 3 5 DN{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4 -1 10.802 0.0 0.0 0.32081 0.0 0.0 2844.923849518501 0.0 2844.923849518501 0.0 7.703037561203843 0.0 0.0 0 0.0 0.0 0.0 0.0 DN{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 0.32081 - 28 + 1 2.333 34749.3 0.4300000071525574 1667 3949 5615 SUDHL4_400M_050219_1,5618 SUDHL4_400M_050219_1,5618, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5621 28.822 61.0 2189900.0 25 0 529900.0 -1 0 97 354.21329360151697 706.412034269834 2 354.2134582400322 MULTI CID FTMS 0 0 0 5620 462232.28125 0.9788355751283117 1 -0.0224342346191406 1 5 PPA 3 -1 43.945 0.0 0.0 6.2209 0.0 0.0 0.0 438.2473323362061 438.2473323362061 18.883578386120234 0.0 0.0 0.0 0 0.8539171939081174 0.9208187539523752 0.0 0.0 PPA 6.2209 - 63 + 1 2.333 107353.8 1.0 1668 3951 5620 SUDHL4_400M_050219_1,5621 SUDHL4_400M_050219_1,5621, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5622 28.836 800.0 88927.0 25 0 5489.7 + 29874 QQYYPDGNSQY 11 111 681.7837096924916 1361.552866451783 2 681.7842285037041 MULTI CID FTMS 0 0 0 5620 73258.6640625 0.699341320165355 -3 0.0611400604248046 2 Unmodified _QQYYPDGNSQY_ nc|ENSG00000141380|Q15532-2|SS18 43.77239144664712 0.1542841003880809 5 YQ{[WS]|[C(Carbamidomethyl (C)){I|L}]} 4 9 27.92 0.0 0.0 2.0506 0.0 0.0 779.3074056336462 0.0 779.3074056336462 0.0 4.212731494904958 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.5 YQ{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.0506 - 398 + 1 2.333 58183.9 0.6600000262260437 1669 3951 5620 SUDHL4_400M_050219_1,5622 SUDHL4_400M_050219_1,5622,QQYYPDGNSQY False True QQYYPDGNSQY 28.836224 681.784228503704 699918.4375 5620.0 nc|ENSG00000141380|Q15532-2|SS18 6.56163231531779 2.0 True 11.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 5623 28.84 199.0 253600.0 25 0 24795.0 + 13662 HPWRGERLQEA 11 86 460.2389870343002 0 460.2392455935478 PEAK CID FTMS 0 0 0 5620 179500.765625 1.0 0 0.0 3 Unmodified _HPWRGERLQEA_ REV__ENST00000540326.5_1_9:127113222-127113528:+|nuORF 9.38312468134398 0.4559597037863106 5 W 1 -1 4.6041 0.0 0.0 0.50128 0.0 0.0 600.3046819770005 129.05600916080314 729.3606911378037 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.50128 + + 3 + 1 2.333 42228.7 1.0 1670 3951 5620 SUDHL4_400M_050219_1,5623 SUDHL4_400M_050219_1,5623,HPWRGERLQEA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5626 28.854 406.0 325640.0 25 0 90933.0 + -1 NQKDGMVSF 9 127 521.2565841998339 520.2493077332339 1 521.2570678591728 MULTI CID FTMS 0 0 0 5625 116245.484375 0.2860835114823539 -6 0.1060371398925781 1 nc|ENSG00000141030|Q9UNS2-2|COPS3;ENSG00000141030|ENST00000268717|COPS3 5 S{M(Oxidation (M))|F} 2 -1 15.573 0.0 0.0 2.9934 0.0 0.0 268.1386185015917 0.0 268.1386185015917 0.0 4.463950151760656 0.0 0.0 0 0.0 0.0 0.0 0.0 S{M(Oxidation (M))|F} 2.9934 - 37 + 1 2.333 106660.6 1.0 1671 3953 5625 SUDHL4_400M_050219_1,5626 SUDHL4_400M_050219_1,5626, False False NQKDGMVSF 28.853826 521.257067859173 1687824.25 5625.0 nc|ENSG00000141030|Q9UNS2-2|COPS3;;ENSG00000141030|ENST00000268717|COPS3 4.893899917602539 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5627 28.868 800.0 185980.0 25 0 11319.0 + 29220 NAITPGSRL 9 175 464.7650435033525 927.515534073505 2 464.7642089724541 MULTI CID FTMS 0 0 0 5625 98904.578125 0.6419174082729645 -5 0.0875606536865234 2 Unmodified _QGLTIFHL_ ENSG00000184261|ENST00000327876|KCNK12 44.40701690623563 0.1655546087385432 5 {[QG]|[NA]}{I|L}T[WK]PV 8 4 + 58.452 0.0 0.0 6.302 6.302 83.527 0.0 0.0 0.0 45.97804375441612 5.362205500870161 5.362205500870161 1.972805581256196 0 1.2614393726401687 1.6989700043360187 0.3252574989159953 0.2742275032520141 {[QG]|[NA]}{I|L}T[WK]PV;{[QG]|[NA]}{I|L}T{I|L}[NS]PV;{[QG]|[NA]}{I|L}T[WK]VP;{[QG]|[NA]}{I|L}T{I|L}[NS]VP;{[QG]|[NA]}{I|L}T{I|L}[NP]SV;{[QG]|[NA]}{I|L}T{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L};{[QG]|[NA]}{I|L}T[WP]KV;{[QG]|[NA]}{I|L}{I|L}T[NS]PV;{[QG]|[NA]}{I|L}T{I|L}[SG]RP;{[QG]|[NA]}{I|L}T[WP]VK 6.302;6.0893;5.5484;5.3357;5.3231;5.1071;5.0834;4.8627;4.6866;4.27 -;-;-;-;-;+;-;-;-;- + 759 + 1 2.333 115973.7 0.5600000023841858 1672 3953 5625 SUDHL4_400M_050219_1,5627 SUDHL4_400M_050219_1,5627,QGLTIFHL False False NAITPGSRL 28.867641 464.764208972454 665063.125 5625.0 ENSG00000184261|ENST00000327876|KCNK12 3.6462812423706055 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5629 28.872 10.0 6248200.0 25 0 1458600.0 + 3125 AVPPALRGP 9 48 439.2665232806816 876.5184936281631 2 439.2664367556572 MULTI CID FTMS 0 0 0 5628 5521907.0 0.839308223276771 4 -0.0668163299560546 1 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 5 {[VA]|[{I|L}G]}PPA 5 -1 45.471 0.0 0.0 5.1877 0.0 0.0 0.0 438.2468429012629 438.2468429012629 31.28985010523329 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 5.1877 + + 24 + 1 2.333 53381.8 1.0 1673 3954 5628 SUDHL4_400M_050219_1,5629 SUDHL4_400M_050219_1,5629,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5630 28.876 137.0 340610.0 25 0 38078.0 -1 RLMNDMTAV 9 86 533.7550855487959 0 533.7551757693291 PEAK CID FTMS 0 0 0 5628 180609.359375 0.6062718802591166 -4 0.0540218353271484 2 Oxidation (M) _RLM(Oxidation (M))NDMTAV_ ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1 13.90604991867851 0.2674652324371145 5 TM 2 -1 16.454 0.0 0.0 1.5442 0.0 0.0 188.11959384974176 642.2672614853641 830.3868553351058 0.0 0.0 0.0 0.0 0 0.5 0.0 0.5 0.0 TM 1.5442 - 67 + 1 2.333 42004.6 1.0 1674 3954 5628 SUDHL4_400M_050219_1,5630 SUDHL4_400M_050219_1,5630,RLMNDMTAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5631 28.882 371.0 171250.0 25 0 13810.0 224 AATQRLAL 8 117 422.255897511138 842.497242089076 2 422.2553893923759 MULTI CID FTMS 0 0 0 5628 93852.5 0.6571285786428398 -2 0.0275650024414062 3 Unmodified _AATQRLAL_ ENSG00000283567|ENST00000635964|C19orf85 23.1484247019978 0.5573009939494978 5 AATP[KT]A 7 4 31.215 0.0 0.0 3.705 0.0 0.0 0.0 199.1097048178448 199.1097048178448 16.26628182818699 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 AATP[KT]A 3.705 - 92 1 2.333 55962.2 1.0 1675 3954 5628 SUDHL4_400M_050219_1,5631 SUDHL4_400M_050219_1,5631,AATQRLAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5632 28.896 800.0 132500.0 25 0 16826.0 + -1 NEPETCLYSYF 11 124 711.8000347131986 1421.585516493197 2 711.7997924685478 MULTI CID FTMS 0 0 0 5628 89093.5234375 0.0377048093155423 -12 0.2647857666015625 4 Carbamidomethyl (C) _NEPETC(Carbamidomethyl (C))LYSYF_ REV__ENSG00000167703|ENST00000301335|SLC43A2;REV__ENST00000572135.5_1_17:1488956-1531469:-|nuORF;REV__ENST00000575944.1_1_17:1519839-1531078:-|nuORF;REV__nc|ENSG00000167703|Q8N370-2|SLC43A2;REV__nc|ENSG00000167703|Q8N370-3|SLC43A2 15.248480904072842 0.7179608125786238 5 {[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y 12 -1 + 97.837 0.0 0.0 6.8822 6.8822 83.879 0.0 0.0 0.0 1.610496008391891 11.382353118286233 1.610496008391891 1.1394335230683763 0 1.242992819099939 1.0 1.948104871308642 1.055462187404089 {[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y;[AG]AHDEAQQDA{M(Oxidation (M))|F}Y;[AG]AHDEAGAQDA{M(Oxidation (M))|F}Y;[AG]ADHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y;[AG]DAHEAQQDA{M(Oxidation (M))|F}Y;[AG]ADHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAGAQDA{M(Oxidation (M))|F}Y;[AG]DAHEAGAQDA{M(Oxidation (M))|F}Y 6.8822;6.8021;6.769;6.6906;6.6262;6.626;6.626;6.5479;6.5477;6.5477 -;-;-;-;-;-;-;-;-;- 7025 1 2.333 75064.9 0.5600000023841858 1676 3954 5628 SUDHL4_400M_050219_1,5632 SUDHL4_400M_050219_1,5632,NEPETCLYSYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5634 28.906 392.0 194020.0 25 0 10275.0 + 44353 YLQVHVPY 8 117 509.769635505208 1017.524718077216 2 510.2689086794853 MULTI CID FTMS 0 0 0 5633 141441.5 0.042779439380243 29 -0.6989173889160156 1 Unmodified _YLQVHVPY_ REV__ENSG00000070614|ENST00000261797|NDST1;REV__ENSG00000164100|ENST00000296499|NDST3;REV__nc|ENSG00000070614|P52848-2|NDST1;REV__nc|ENSG00000070614|P52848-3|NDST1;REV__nc|ENSG00000164100|O95803-3|NDST3 14.581692164780916 0.6954967302934248 5 [Y{I|L}]D 3 -1 31.483 0.0 0.0 3.0941 0.0 0.0 0.0 623.3270468056689 623.3270468056689 6.002480183341632 0.0 0.0 0.0 0 0.5796896906561032 2.0 0.0 0.0 [Y{I|L}]D 3.0941 - 203 + 1 2.333 63801.8 1.0 1677 3955 5633 SUDHL4_400M_050219_1,5634 SUDHL4_400M_050219_1,5634,YLQVHVPY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5635 28.91 210.0 258850.0 25 0 32505.0 + + -1 SLANETHQL 9 98 506.7563198184055 1011.498086703611 2 506.7563354372978 MULTI CID FTMS 0 0 0 5633 142968.359375 0.8047877702884912 -4 0.0783920288085937 2 Oxidation (M) _ISELLQM(Oxidation (M))Y_ ENST00000507686.1_1_4:2747118-2749660:-|nuORF;ENST00000511352.1_1_4:2749267-2757702:-|nuORF;nc|ENSG00000168884|Q8NFZ5-2|TNIP2;ENSG00000168884|ENST00000315423|TNIP2 18.13498045792455 0.6430038125133779 5 {[TV]|[{I|L}S]}A 3 -1 34.705 0.0 0.0 3.431 0.0 0.0 0.0 737.3252047174436 737.3252047174436 23.4459400514778 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}A 3.431 - 129 + 1 2.333 48035.5 1.0 1678 3955 5633 SUDHL4_400M_050219_1,5635 SUDHL4_400M_050219_1,5635,ISELLQMY False False SLANETHQL 28.909517 506.756335437298 686625.9375 5633.0 ENST00000507686.1_1_4:2747118-2749660:-|nuORF;;ENST00000511352.1_1_4:2749267-2757702:-|nuORF;;nc|ENSG00000168884|Q8NFZ5-2|TNIP2;;ENSG00000168884|ENST00000315423|TNIP2 3.4206257735689483 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5636 28.912 124.0 677610.0 25 0 272530.0 2108 APTAPLPY 8 75 415.22652526076536 828.4384975883307 2 415.2265502810478 MULTI CID FTMS 0 0 0 5633 321595.125 0.5036801136429822 -8 0.1580085754394531 3 Unmodified _APTAPLPY_ ENSG00000139722|ENST00000267202|VPS37B 2.889219685676258 0.8067950007271085 5 Y 1 7 11.783 0.0 0.0 1.4223 0.0 0.0 647.3641090158683 0.0 647.3641090158683 0.0 -9.186363512511502 -9.186363512511502 0.0 0 0.0 0.0 0.0 0.0 + Y 1.4223 + + 21 + 1 2.333 69047.7 1.0 1679 3955 5633 SUDHL4_400M_050219_1,5636 SUDHL4_400M_050219_1,5636,APTAPLPY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5637 28.917 256.0 233410.0 25 0 19140.0 27223 PGLEEHWAL 9 100 526.2625082355762 1050.5104635379523 2 526.2628661990166 MULTI CID FTMS 0 0 0 5633 131911.78125 0.7901164525913975 -4 0.0783920288085937 4 Unmodified _PGLEEHWAL_ ENST00000376499.7_2_9:84303922-84304000:-|nuORF 30.22481116460888 0.1466181017706357 5 [AG]GPQ[HT]{[CP]|[EA]}A{I|L} 11 7 + 40.767 0.0 0.0 3.8807 3.8807 82.577 0.0 0.0 0.0 6.82145510668532 18.838378506120826 6.82145510668532 9.093892921715948 0 0.7302046884880937 1.154901959985743 0.4247425010840047 0.0 [AG]GPQ[HT]{[CP]|[EA]}A{I|L};{[QG]|[NA]}PQ[HT]{[CP]|[EA]}A{I|L};[NP]AQ[HT]{[CP]|[EA]}A{I|L};[NP][WQ]P[EP]A{I|L};[PG]QQ[HT]{[CP]|[EA]}A{I|L};[PG]GAQ[HT]{[CP]|[EA]}A{I|L};[PG]G[WQ]P[EP]A{I|L};[{I|L}A][WH]D[EP]A{I|L};[NP][WQ][WH]A{I|L};[NP][C(Carbamidomethyl (C))H]P{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L} 3.8807;3.015;3.015;2.7004;2.6271;2.3447;2.0259;1.9715;1.8482;1.4019 -;-;-;-;-;-;-;-;-;- 413 1 2.333 53246.2 1.0 1680 3955 5633 SUDHL4_400M_050219_1,5637 SUDHL4_400M_050219_1,5637,PGLEEHWAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5639 28.922 139.0 597920.0 25 0 84337.0 + 18890 LAVDPNRAV 9 89 477.77217115231184 953.5297893714236 2 477.7721130251884 MULTI CID FTMS 0 0 0 5638 444175.34375 0.5751348411283084 5 -0.0731029510498046 1 Unmodified _LAVDPNRAV_ ENSG00000048162|ENST00000614830|NOP16;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;ENST00000510608.1_1_5:175813700-175815552:-|nuORF;nc|ENSG00000048162|Q9Y3C1-2|NOP16;nc|ENSG00000048162|Q9Y3C1-3|NOP16 49.93300154707207 0.0405168250806675 5 {I|L}AVDP 5 4 67.03 0.0 0.0 7.0297 0.0 0.0 0.0 455.2390641757768 455.2390641757768 45.60353184424318 0.0 0.0 0.0 0 1.25 1.6989700043360187 0.3807196863200844 0.0 + {I|L}AVDP 7.0297 + + 92 + 1 2.333 68949.2 1.0 1681 3956 5638 SUDHL4_400M_050219_1,5639 SUDHL4_400M_050219_1,5639,LAVDPNRAV True True LAVDPNRAV 28.922144 477.772113025188 7009618.5 5638.0 ENST00000510608.1_1_5:175813700-175815552:-|nuORF;;ENSG00000048162|ENST00000614830|NOP16;;nc|ENSG00000048162|Q9Y3C1-2|NOP16;;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;;nc|ENSG00000048162|Q9Y3C1-3|NOP16 7.556429227193196 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5640 28.925 159.0 359420.0 25 0 34400.0 + 23090 LSMEPLAF 8 89 454.2353065517221 906.4560601702442 2 454.2368957400322 MULTI CID FTMS 0 0 0 5638 100875.328125 0.1457286213241451 9 -0.1844234466552734 2 Unmodified _LSMEPLAF_ REV__ENSG00000133958|ENST00000695012|UNC79;REV__nc|ENSG00000133958|Q9P2D8-2|UNC79;REV__nc|ENSG00000133958|Q9P2D8-3|UNC79;REV__nc|ENSG00000133958|Q9P2D8|UNC79 14.581692164780916 0.6954967302934248 5 A{M(Oxidation (M))|F} 2 -1 25.238 0.0 0.0 2.7843 0.0 0.0 670.3390843175083 0.0 670.3390843175083 0.0 12.464799177027498 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 A{M(Oxidation (M))|F} 2.7843 + + 123 + 1 2.333 49327.1 1.0 1682 3956 5638 SUDHL4_400M_050219_1,5640 SUDHL4_400M_050219_1,5640,LSMEPLAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5641 28.93 283.0 287820.0 25 0 23153.0 27795 PLPPPPPPP 9 120 454.7652914609602 907.5160299887204 2 454.7659789919853 MULTI CID FTMS 0 0 0 5638 86160.984375 0.9275701545722332 3 -0.0389823913574218 3 Unmodified _PLPPPPPPP_ ENSG00000009694|ENST00000371130|TENM1;ENSG00000100312|ENST00000216139|ACR;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000117560|ENST00000367721|FASLG;ENSG00000124496|ENST00000695948|TRERF1;ENSG00000126460|ENST00000246794|PRRG2;ENSG00000132510|ENST00000448097|KDM6B;ENSG00000138771|ENST00000296043|SHROOM3;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000141456|ENST00000572293|PELP1;ENSG00000146083|ENST00000274811|RNF44;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000152217|ENST00000649279|SETBP1;ENSG00000160685|ENST00000535420|ZBTB7B;ENSG00000170234|ENST00000307063|PWWP2A;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000175073|ENST00000310421|VCPIP1;ENSG00000175785|ENST00000393140|PRIMA1;ENSG00000176182|ENST00000322217|MYPOP;ENSG00000188779|ENST00000380035|SKOR1;ENSG00000204334|ENST00000697325|ERICH2;ENSG00000248905|ENST00000616417|FMN1;ENSG00000259956|ENST00000563281|RBM15B;ENST00000361272.8_2_8:17102747-17104366:-|nuORF;ENST00000379565.7_1_X:20227482-20284914:-|nuORF;ENST00000508096.1_1_10:126605730-126631034:+|nuORF;ENST00000508478.1_1_5:175957081-175957609:-|nuORF;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;ENST00000596700.5_1_19:50084718-50093643:+|nuORF;ENST00000597121.5_1_19:50086773-50093643:+|nuORF;nc|ENSG00000009694|Q9UKZ4-2|TENM1;nc|ENSG00000110076|P58401|NRXN2;nc|ENSG00000117560|P48023-2|FASLG;nc|ENSG00000124496|Q96PN7|TRERF1;nc|ENSG00000132510|O15054-1|KDM6B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000146083|Q7L0R7-2|RNF44;nc|ENSG00000160685|O15156-2|ZBTB7B;nc|ENSG00000170004|Q12873-3|CHD3;nc|ENSG00000170234|Q96N64-2|PWWP2A;nc|ENSG00000170234|Q96N64-3|PWWP2A;nc|ENSG00000175785|Q86XR5-2|PRIMA1;nc|ENSG00000188779|P84550-3|SKOR1;nc|ENSG00000248905|Q68DA7-5|FMN1;REV__ENSG00000048991|ENST00000683871|R3HDM1;REV__ENSG00000066855|ENST00000262146|MTFR1;REV__ENSG00000068489|ENST00000262293|PRR11;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000100592|ENST00000360909|DAAM1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000112290|ENST00000392589|WASF1;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000117560|ENST00000367721|FASLG;REV__ENSG00000119596|ENST00000325680|YLPM1;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000122574|ENST00000242140|WIPF3;REV__ENSG00000125740|ENST00000353609|FOSB;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000131504|ENST00000389054|DIAPH1;REV__ENSG00000132510|ENST00000448097|KDM6B;REV__ENSG00000135250|ENST00000393651|SRPK2;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138081|ENST00000403359|FBXO11;REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__ENSG00000141431|ENST00000269197|ASXL3;REV__ENSG00000145414|ENST00000274054|NAF1;REV__ENSG00000146122|ENST00000274867|DAAM2;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000152409|ENST00000396137|JMY;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000157827|ENST00000288670|FMNL2;REV__ENSG00000162775|ENST00000369784|RBM15;REV__ENSG00000164916|ENST00000328914|FOXK1;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000173166|ENST00000319170|RAPH1;REV__ENSG00000173917|ENST00000330070|HOXB2;REV__ENSG00000175073|ENST00000310421|VCPIP1;REV__ENSG00000176624|ENST00000406189|MEX3C;REV__ENSG00000186472|ENST00000333891|PCLO;REV__ENSG00000187017|ENST00000645284|ESPN;REV__ENSG00000187164|ENST00000355371|SHTN1;REV__ENSG00000203485|ENST00000392634|INF2;REV__ENSG00000215045|ENST00000457091|GRID2IP;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000248905|ENST00000616417|FMN1;REV__ENSG00000274209|ENST00000620264|ANTXRL;REV__ENST00000324225.8_1_11:117049861-117050083:+|nuORF;REV__ENST00000358635.7_1_4:140005384-140005639:-|nuORF;REV__ENST00000368219.1_1_1:156698226-156698472:-|nuORF;REV__ENST00000379565.7_1_X:20227482-20284914:-|nuORF;REV__ENST00000424808.6_1_8:66582187-66620357:+|nuORF;REV__ENST00000471339.1_1_5:173036657-173043649:-|nuORF;REV__ENST00000519935.1_1_7:27209203-27211037:+|nuORF;REV__ENST00000587358.1_1_19:45974364-45976267:+|nuORF;REV__nc|ENSG00000048991|Q15032-2|R3HDM1;REV__nc|ENSG00000048991|Q15032-3|R3HDM1;REV__nc|ENSG00000048991|Q15032-4|R3HDM1;REV__nc|ENSG00000048991|Q15032|R3HDM1;REV__nc|ENSG00000066855|Q15390-2|MTFR1;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100592|Q9Y4D1-3|DAAM1;REV__nc|ENSG00000100592|Q9Y4D1|DAAM1;REV__nc|ENSG00000104885|Q8TEK3-1|DOT1L;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000117560|P48023-2|FASLG;REV__nc|ENSG00000119596|P49750-1|YLPM1;REV__nc|ENSG00000119596|P49750-3|YLPM1;REV__nc|ENSG00000125740|P53539-10|FOSB;REV__nc|ENSG00000125740|P53539-2|FOSB;REV__nc|ENSG00000125740|P53539-3|FOSB;REV__nc|ENSG00000125740|P53539-5|FOSB;REV__nc|ENSG00000125740|P53539-8|FOSB;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341;REV__nc|ENSG00000131504|O60610-2|DIAPH1;REV__nc|ENSG00000131504|O60610-3|DIAPH1;REV__nc|ENSG00000132510|O15054-1|KDM6B;REV__nc|ENSG00000135250|P78362|SRPK2;REV__nc|ENSG00000138081|Q86XK2-4|FBXO11;REV__nc|ENSG00000138081|Q86XK2-5|FBXO11;REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-2|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-7|DIAPH3;REV__nc|ENSG00000140836|Q15911-2|ZFHX3;REV__nc|ENSG00000146122|Q86T65-4|DAAM2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000157827|Q96PY5|FMNL2;REV__nc|ENSG00000162775|Q96T37-2|RBM15;REV__nc|ENSG00000162775|Q96T37-3|RBM15;REV__nc|ENSG00000162775|Q96T37-4|RBM15;REV__nc|ENSG00000170004|Q12873-3|CHD3;REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO;REV__nc|ENSG00000187017|B1AK53-2|ESPN;REV__nc|ENSG00000187164|A0MZ66-2|SHTN1;REV__nc|ENSG00000187164|A0MZ66-3|SHTN1;REV__nc|ENSG00000187164|A0MZ66-4|SHTN1;REV__nc|ENSG00000187164|A0MZ66-5|SHTN1;REV__nc|ENSG00000187164|A0MZ66-6|SHTN1;REV__nc|ENSG00000187164|A0MZ66-8|SHTN1;REV__nc|ENSG00000203485|Q27J81-2|INF2;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__nc|ENSG00000248905|Q68DA7-5|FMN1;REV__PCLO|p.V3720Sfs*2|1|0.13|ENSG00000186472|chr7:82916828-82916829|-/T|frameshift_variant 56.04830969593885 0.0282699710924866 5 [YK]{I|L}PPKY 7 7 + 23.875 0.0 0.0 2.6308 2.6308 76.223 0.0 0.0 0.0 2.04119982655925 6.7966441831406925 2.04119982655925 3.679067360440605 0 1.08992934257583 0.0 0.0 0.0 [YK]{I|L}PPKY;[{I|L}P][YK]PKY;[YK]P{I|L}PKY;[Q{I|L}]{M(Oxidation (M))|F}{I|L}PKY 2.6308;2.2254;2.0449;1.8199 -;-;-;- 219 1 2.333 68667.3 1.0 1683 3956 5638 SUDHL4_400M_050219_1,5641 SUDHL4_400M_050219_1,5641,PLPPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5644 28.944 386.0 229730.0 25 0 16709.0 37536 TLHPVWSQQ 9 120 548.2829799657695 1094.551406998339 2 548.2847167849541 MULTI CID FTMS 0 0 0 5643 100104.90625 0.0665364293190602 -13 0.2408351898193359 1 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 15.738622578938676 0.4106572216562794 5 HEPPHVP 7 8 33.409 0.0 0.0 3.0523 0.0 0.0 283.1521383028767 0.0 283.1521383028767 0.0 18.91080174219555 0.0 0.0 0 2.017220322351953 0.0 0.3807196863200844 0.0 HEPPHVP 3.0523 - 577 + 1 2.333 71965.9 1.0 1684 3958 5643 SUDHL4_400M_050219_1,5644 SUDHL4_400M_050219_1,5644,TLHPVWSQQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5645 28.948 198.0 355680.0 25 0 44863.0 + 43582 YADVGGKQF 9 98 492.7430826870586 983.4716124409172 2 492.7419921755791 MULTI CID FTMS 0 0 0 5643 119106.4375 0.0546226192606785 -8 0.1208381652832031 2 Unmodified _YADVGGKQF_ ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF 39.94969957227396 0.0757326808254658 5 YADVNKQ{M(Oxidation (M))|F} 8 2 + 72.927 0.0 0.0 7.4152 7.4152 85.071 0.0 0.0 0.0 51.5121042549364 10.815573004356716 10.815573004356716 1.3033376849500655 0 0.9247425010840048 2.0 0.0 0.3494850021680094 YADVNKQ{M(Oxidation (M))|F};YADVGGKQ{M(Oxidation (M))|F};YADVNK[AG]{M(Oxidation (M))|F};YADVGGK[AG]{M(Oxidation (M))|F};YA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};YWVS[YV][PA] 7.4152;7.2827;6.1181;5.991;3.6336;1.9523 -;+;-;-;-;- + 641 + 1 2.333 58679.2 1.0 1685 3958 5643 SUDHL4_400M_050219_1,5645 SUDHL4_400M_050219_1,5645,YADVGGKQF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5646 28.956 457.0 197360.0 25 0 11757.0 + 23462 LATPTKSEL 9 145 479.2722573954424 956.5299618576848 2 480.2754089236259 MULTI CID FTMS 0 0 0 5643 101496.359375 0.9994129622941166 -1 0.0039920806884765 3 Unmodified _LTGRAPETL_ ENST00000522306.1_1_8:31077684-31078419:-|nuORF;ENSG00000104756|ENST00000221200|KCTD9 18.13498045792455 0.3457906370836843 5 [{I|L}A]SQ 4 7 23.984 0.0 0.0 2.5074 0.0 0.0 0.0 554.2938222915316 554.2938222915316 6.73773826516792 0.0 0.0 0.0 0 0.0 1.154901959985743 0.4247425010840047 0.0 [{I|L}A]SQ 2.5074 - 824 1 2.333 72902.5 1.0 1686 3958 5643 SUDHL4_400M_050219_1,5646 SUDHL4_400M_050219_1,5646,LTGRAPETL False False LATPTKSEL 28.955784 480.275408923626 717556.25 5643.0 ENST00000522306.1_1_8:31077684-31078419:-|nuORF;;ENSG00000104756|ENST00000221200|KCTD9 1.2954107522964478 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5649 28.976 800.0 159970.0 25 0 23877.0 + -1 DNCFMARFY 9 115 612.2521389358108 1222.4897249384214 2 612.2516967654228 MULTI CID FTMS 0 0 0 5648 98281.7578125 0.152007804895873 -8 0.1197528839111328 1 Carbamidomethyl (C) _DNC(Carbamidomethyl (C))FMARFY_ REV__ENSG00000114796|ENST00000242810|KLHL24;REV__ENSG00000172578|ENST00000341319|KLHL6;REV__ENST00000489245.5_1_3:183211997-183273441:-|nuORF;REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24 21.74664581756881 0.2544899275067181 5 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 -1 + 106.24 0.0 0.0 8.6901 8.6901 93.603 0.0 0.0 0.0 7.269987279362624 76.57689935101807 7.269987279362624 9.030899869919438 0 1.0 0.0 1.552887198244136 1.6549471895720984 [HD]EAQQDA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQDA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HA[AG]QDA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQ[AG]DA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQWGA{M(Oxidation (M))|F}Y;[HD]EAQ{[DA]|[EG]}GA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQW{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQDA{M(Oxidation (M))|F}Y 8.6901;7.9513;7.9404;7.9404;7.2017;7.2017;6.9637;6.9528;6.8197;6.5626 -;-;-;-;-;-;-;-;-;- 3534 1 2.343 95685.5 0.7099999785423279 1687 3960 5648 SUDHL4_400M_050219_1,5649 SUDHL4_400M_050219_1,5649,DNCFMARFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5650 28.99 800.0 98218.0 25 0 13561.0 8259 EQHQGQEEGYF 11 116 676.2815548733374 1350.5485568134748 2 676.2822753787041 MULTI CID FTMS 0 0 0 5648 86788.9140625 0.505489040665796 -3 0.0293636322021484 2 Unmodified _EQHQGQEEGYF_ ENSG00000197808|ENST00000588268|ZNF461;nc|ENSG00000197808|Q8TAF7-2|ZNF461 20.41453444215458 0.6105011870913812 5 WQQ[HD]{M(Oxidation (M))|F}Y 7 8 58.192 0.0 0.0 4.3088 0.0 0.0 328.1432733602388 0.0 328.1432733602388 0.0 11.8740810491245 0.0 0.0 0 0.0 0.0 1.416386562212267 1.2302046884880935 WQQ[HD]{M(Oxidation (M))|F}Y 4.3088 - 3006 + 1 2.343 63109.7 0.6399999856948853 1688 3960 5648 SUDHL4_400M_050219_1,5650 SUDHL4_400M_050219_1,5650,EQHQGQEEGYF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5652 29.006 800.0 97368.0 25 0 17085.0 -1 KLEQAQEMMK 10 113 634.3037664901366 1266.592980047073 2 634.3026611208916 MULTI CID FTMS 0 0 0 5651 68491.4453125 0.4957544030841946 6 -0.15521240234375 1 2 Oxidation (M) _KLEQAQEM(Oxidation (M))M(Oxidation (M))K_ ENSG00000164440|ENST00000358430|TXLNB 23.78978130925829 0.4341852049148378 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}R[WR]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 9 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}R[WR]A + + 25.635 3.1354 0.37939 2.0239 2.0239 52.948 0.0 0.0 0.0 0.0 14.214879293385057 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.4247425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}R[WR]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 2.0239 - 191 + 1 2.343 62247.7 0.5799999833106995 1689 3961 5651 SUDHL4_400M_050219_1,5652 SUDHL4_400M_050219_1,5652,KLEQAQEMMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5653 29.011 225.0 233010.0 25 0 13666.0 + 2809 ATVQPGQNF 9 101 481.2409451245242 960.4673373158485 2 481.2405273318291 MULTI CID FTMS 0 0 0 5651 117512.2890625 0.8812233405089283 -2 0.0341205596923828 2 Unmodified _ATVQPGQNF_ ENSG00000143106|ENST00000271308|PSMA5;nc|ENSG00000143106|P28066-2|PSMA5 6.723162845929126 0.6799819581413107 5 {M(Oxidation (M))|F} 1 8 13.099 0.0 0.0 1.3638 0.0 0.0 795.3883558478782 0.0 795.3883558478782 0.0 -6.756368635175608 -6.756368635175608 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.3638 + + 103 + 1 2.343 43595.7 1.0 1690 3961 5651 SUDHL4_400M_050219_1,5653 SUDHL4_400M_050219_1,5653,ATVQPGQNF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5654 29.024 800.0 136670.0 25 0 18139.0 + 41060 VMMDPNSTQRY 11 108 671.297806562061 1340.581060190922 2 671.2992431521416 MULTI CID FTMS 0 0 0 5651 109637.328125 0.8887383196805664 -4 0.0594902038574218 3 Unmodified _VMMDPNSTQRY_ ENSG00000124571|ENST00000265351|XPO5 57.10758569107544 0.0808838796364293 5 VMMDPNSTQRY 11 0 + 102.53 0.0 0.0 7.6485 7.6485 89.414 0.0 0.0 0.0 86.54838217632876 8.169567004900003 8.169567004900003 4.527619088602194 0 1.1307196863200843 2.0 0.3054621874040891 0.805462187404089 + + VMMDPNSTQRY;VMMDPNSTQVGY;VMMDPNST[AG]RY;VMMDPGGSTQRY;VMMDPNS[HS]VQP;VMMDPGGSTQVGY;VMMDPNST[AG]VGY;VMMDPGGST[AG]RY;VMMDPN[C(Carbamidomethyl (C))R]RY;VMMDPGGS[HS]VQP 7.6485;7.3108;6.9676;6.9676;6.8362;6.6321;6.6321;6.2889;6.2051;6.1575 +;-;-;-;-;-;-;-;-;- + 818 + 1 2.343 82724.9 0.6200000047683716 1691 3961 5651 SUDHL4_400M_050219_1,5654 SUDHL4_400M_050219_1,5654,VMMDPNSTQRY True True VMMDPNSTQRY 29.024379 671.299243152142 736606.1875 5651.0 ENSG00000124571|ENST00000265351|XPO5 8.640799045562744 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5655 29.038 800.0 167310.0 25 0 18805.0 + 25271 MVVMDYAMWT 10 145 623.7668038605312 1245.5190547878624 2 623.7673828005791 MULTI CID FTMS 0 0 0 5651 125442.25 1.0 0 0.0 4 Unmodified _MVVMDYAMWT_ REV__ENSG00000217442|ENST00000406915|SYCE3 20.453626601364224 0.5043500229302764 5 MVVEE{M(Oxidation (M))|F}{[QC]|[C(Carbamidomethyl (C))A]}VY 10 -1 + 71.291 0.0 0.0 5.7238 5.7238 90.558 0.0 0.0 0.0 38.66855842475279 4.084938383626522 4.084938383626522 10.7670980741876 0 1.6861818737241734 2.0 0.3494850021680094 0.0 MVVEE{M(Oxidation (M))|F}{[QC]|[C(Carbamidomethyl (C))A]}VY;MVVEE{M(Oxidation (M))|F}[HM]QP;MVVEE{M(Oxidation (M))|F}[HM][AG]P;MVVEE{M(Oxidation (M))|F}[HC][VG]P;{[QD]|[EN]|[WG]|[KD]|[RS]}[HM]{M(Oxidation (M))|F}EEV[DP];{[TV]|[{I|L}S]}A[HC]{M(Oxidation (M))|F}EEV[DP];[QA][YC(Carbamidomethyl (C))][HQ]EV[DP];{[VA]|[{I|L}G]}T[HC]{M(Oxidation (M))|F}EEV[DP];[TP][WY][HC]EV[DP];{[QD]|[EN]|[WG]|[KD]|[RS]}[HM][YC(Carbamidomethyl (C))]MVY 5.7238;4.8593;4.1235;3.7405;2.0516;1.219;1.0478;0.74885;0.60709;0.5034 -;-;-;-;-;-;-;-;-;- 423 + 1 2.343 99696.6 0.6600000262260437 1692 3961 5651 SUDHL4_400M_050219_1,5655 SUDHL4_400M_050219_1,5655,MVVMDYAMWT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5657 29.051 490.0 172150.0 25 0 13476.0 + 12250 GQYPTQPTY 9 123 527.7455456158206 1053.476538298441 2 527.7449828982353 MULTI CID FTMS 0 0 0 5656 114263.3359375 0.072960760272538 16 -0.2930335998535156 1 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 25.399314129420983 0.2080152500878129 5 [TP]QY 4 5 29.628 0.0 0.0 2.8124 0.0 0.0 0.0 561.2313350115847 561.2313350115847 2.715299873086608 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.9361818737241734 0.0 [TP]QY 2.8124 - 234 1 2.344 71876.0 1.0 1693 3962 5656 SUDHL4_400M_050219_1,5657 SUDHL4_400M_050219_1,5657,GQYPTQPTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5658 29.054 195.0 350300.0 25 0 36096.0 + 30847 RILESSPGV 9 102 479.2722573954424 956.5299618576848 2 479.2715942263603 MULTI CID FTMS 0 0 0 5656 224956.65625 0.8487073877117682 -5 0.1077899932861328 2 Unmodified _RILESSPGV_ ENSG00000134779|ENST00000334295|TPGS2;ENST00000587511.1_1_18:34387792-34408730:-|nuORF;ENST00000591648.1_1_18:34398841-34408940:-|nuORF;nc|ENSG00000134779|Q68CL5-1|TPGS2;nc|ENSG00000134779|Q68CL5-3|TPGS2;nc|ENSG00000134779|Q68CL5-4|TPGS2;nc|ENSG00000134779|Q68CL5-5|TPGS2 29.081581746732265 0.1611639662936252 5 SSPGV 5 4 30.632 0.0 0.0 3.2024 0.0 0.0 511.3131228627612 0.0 511.3131228627612 0.0 10.109822581637031 0.0 0.0 0 0.8139919831912392 0.0 0.805462187404089 0.0 + SSPGV 3.2024 + + 121 1 2.344 57763.0 1.0 1694 3962 5656 SUDHL4_400M_050219_1,5658 SUDHL4_400M_050219_1,5658,RILESSPGV False True RILESSPGV 29.054475 479.27159422636 1496827.375 5656.0 ENST00000591648.1_1_18:34398841-34408940:-|nuORF;;nc|ENSG00000134779|Q68CL5-3|TPGS2;;nc|ENSG00000134779|Q68CL5-1|TPGS2;;ENSG00000134779|ENST00000334295|TPGS2;;nc|ENSG00000134779|Q68CL5-5|TPGS2;;ENST00000587511.1_1_18:34387792-34408730:-|nuORF;;nc|ENSG00000134779|Q68CL5-4|TPGS2 3.690006891886393 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5659 29.061 339.0 214860.0 25 0 23259.0 + 15669 IQNPDITSSRY 11 79 647.3255592547463 1292.6365655762925 2 647.3250610232353 MULTI CID FTMS 0 0 0 5656 150106.421875 0.4402452168732672 -4 0.1037979125976562 3 Unmodified _IQNPDITSSRY_ ENSG00000015285|ENST00000376701|WAS 36.39500950444726 0.267929034476522 5 [Q{I|L}]NPD{I|L}TSSRY 11 0 + 66.784 0.0 0.0 5.1665 5.1665 86.475 0.0 0.0 0.0 55.00170998595492 8.8032152260309 8.8032152260309 9.128498242810998 0 1.0 0.0 0.0 0.4247425010840047 + + [Q{I|L}]NPD{I|L}TSSRY;[Q{I|L}]GGPD{I|L}TSSRY;[Q{I|L}]NPD{I|L}TP[TA][HS];[Q{I|L}]YY{I|L}TSSRY;[Q{I|L}]GGPD{I|L}TP[TA][HS];[Q{I|L}]NP{[HG]|PP}QY{I|L}[HS];[Q{I|L}]NPC(Carbamidomethyl (C))V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RY;[Q{I|L}]NPDP[{I|L}T][TA][HS];[Q{I|L}]YY{I|L}TP[TA][HS] 5.1665;4.4603;3.9526;3.0533;2.9201;2.7423;2.294;2.1942;1.508 +;-;-;-;-;-;-;-;- + 723 + 1 2.344 64591.0 1.0 1695 3962 5656 SUDHL4_400M_050219_1,5659 SUDHL4_400M_050219_1,5659,IQNPDITSSRY False True IQNPDITSSRY 29.060631 647.325061023235 2193285.75 5656.0 ENSG00000015285|ENST00000376701|WAS 6.357064565022786 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5660 29.065 257.0 243620.0 25 0 27609.0 + 13708 HQITEVGTM 9 109 508.2474281577259 1014.4803033822518 2 508.2473327517509 MULTI CID FTMS 0 0 0 5656 137130.140625 0.7706286464313399 -5 0.1077899932861328 4 Unmodified _HQLTEVGTM_ nc|ENSG00000060982|P54687-2|BCAT1;nc|ENSG00000060982|P54687-4|BCAT1;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;nc|ENSG00000060982|P54687-5|BCAT1;nc|ENSG00000060982|P54687-3|BCAT1;ENSG00000060982|ENST00000261192|BCAT1 53.832793166522166 0.0319663582346103 5 {[{M(Oxidation (M))|F}C]|[YS]}RTEKTM 8 5 + 63.423 0.0 0.0 6.2517 6.2517 83.949 0.0 0.0 0.0 0.6694678963061307 2.5147128475507685 0.6694678963061307 2.5147128475507685 0 0.0 0.0 1.829689690656103 0.0 {[{M(Oxidation (M))|F}C]|[YS]}RTEKTM;[HQ]{I|L}ETVGTM;{[{M(Oxidation (M))|F}C]|[YS]}RETKTM;{[{M(Oxidation (M))|F}C]|[YS]}KETRTM;{[{M(Oxidation (M))|F}C]|[YS]}GVTE{[NV]|[RG]}{M(Oxidation (M))|F};[MT]K{M(Oxidation (M))|F}TVGTM;[HQ]{I|L}TEVGTM;{[{M(Oxidation (M))|F}C]|[YS]}RTE{[NV]|[RG]}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}GVT{M(Oxidation (M))|F}[WR];{[{M(Oxidation (M))|F}C]|[YS]}KTERTM 6.2517;6.0039;5.151;5.0881;4.9439;4.9396;4.9031;4.3054;4.2576;3.9874 -;-;-;-;-;-;+;-;-;- + 524 + 1 2.344 54967.9 1.0 1696 3962 5656 SUDHL4_400M_050219_1,5660 SUDHL4_400M_050219_1,5660,HQLTEVGTM True True HQITEVGTM 29.065387 508.247332751751 973868.5625 5656.0 nc|ENSG00000060982|P54687-2|BCAT1;;nc|ENSG00000060982|P54687-4|BCAT1;;ENST00000544418.1_1_12:24987681-25055019:-|nuORF;;nc|ENSG00000060982|P54687-5|BCAT1;;nc|ENSG00000060982|P54687-3|BCAT1;;ENSG00000060982|ENST00000261192|BCAT1 6.884668509165446 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5662 29.07 7.5 7559100.0 25 0 1200400.0 + 31334 RMLPHAPGV 9 68 489.2711233229616 976.5276937127232 2 489.2714721560478 MULTI CID FTMS 0 0 0 5661 6816458.0 0.6503023951004686 2 -0.0358905792236328 1 Unmodified _RMLPHAPGV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 26.88365393820708 0.1891292719743517 5 PHAPGV 6 3 39.748 0.0 0.0 4.0703 0.0 0.0 400.2265186994157 0.0 400.2265186994157 0.0 26.614334228094165 0.0 0.0 0 1.1331596456423734 0.0 0.0 0.0 + PHAPGV 4.0703 + + 84 1 2.344 49304.2 1.0 1697 3963 5661 SUDHL4_400M_050219_1,5662 SUDHL4_400M_050219_1,5662,RMLPHAPGV False True RMLPHAPGV 29.070125 489.271472156048 110390024.0 5661.0 ENSG00000196591|ENST00000519065|HDAC2;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 7.076736609141032 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5663 29.079 487.0 147070.0 25 0 12211.0 + 31805 RSTDWSSQY 9 112 565.2490222650986 1128.483491596997 2 565.2479736208916 MULTI CID FTMS 0 0 0 5661 122824.3359375 0.9437430850617764 -2 0.0754299163818359 2 Unmodified _RSTDWSSQY_ ENSG00000167615|ENST00000326764|LENG8;nc|ENSG00000167615|Q96PV6-1|LENG8;nc|ENSG00000167615|Q96PV6-3|LENG8 38.17557092003332 0.0854718145212029 5 {[QS]|[NT]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WSSQY 9 2 + 60.41 0.0 0.0 5.3532 5.3532 81.657 0.0 0.0 0.0 2.614393726401687 16.478174818886373 2.614393726401687 2.614393726401687 0 0.8252574989159953 0.0 1.066901560044258 0.2614393726401688 {[QS]|[NT]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WSSQY;[YQ][PA]WSSQY;[{M(Oxidation (M))|F}V]{[NV]|[RG]}WSSQY;{[QS]|[NT]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WSS[AG]Y;{[QS]|[NT]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[DA]|[EG]}SSQY;[YQ][PA]WSS[AG]Y;{[CA]|SS}{[RE]|[WV]}WSSQY;{[QS]|[NT]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[SG]ESQY;[{M(Oxidation (M))|F}V]{[NV]|[RG]}{[DA]|[EG]}SSQY;[{M(Oxidation (M))|F}V]{[NV]|[RG]}WSS[AG]Y 5.3532;5.1215;4.7689;4.5372;4.5372;4.3055;4.2166;4.02;3.9529;3.9529 -;-;-;-;-;-;-;-;-;- 559 1 2.344 59464.2 1.0 1698 3963 5661 SUDHL4_400M_050219_1,5663 SUDHL4_400M_050219_1,5663,RSTDWSSQY True True RSTDWSSQY 29.078737 565.247973620892 695494.8125 5661.0 nc|ENSG00000167615|Q96PV6-3|LENG8;;ENSG00000167615|ENST00000326764|LENG8;;nc|ENSG00000167615|Q96PV6-1|LENG8 7.230573654174805 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5664 29.08 57.0 746790.0 25 0 59230.0 + 8981 FASHVSPEV 9 82 486.7423837730248 971.4702146128496 2 486.7426330447197 MULTI CID FTMS 0 0 0 5661 553029.375 1.0 0 0.0 3 Unmodified _FASHVSPEV_ ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3 48.345845343767074 0.0439967357579942 5 [{M(Oxidation (M))|F}V]PSVH{[MG]|[TS]}V 9 6 + 45.155 0.0 0.0 4.6482 4.6482 83.1 0.0 0.0 0.0 23.87394998465425 2.3519055442303483 2.3519055442303483 6.478174818886373 0 0.805462187404089 0.0 0.4247425010840047 0.0 [{M(Oxidation (M))|F}V]PSVH{[MG]|[TS]}V;[{M(Oxidation (M))|F}V]PSVH{[WT]|[RM]};M[W{I|L}]VH{[MG]|[TS]}V;M[W{I|L}]VH{[WT]|[RM]};[{M(Oxidation (M))|F}V][WP]H{[MG]|[TS]}V;[{M(Oxidation (M))|F}V][WP]H{[WT]|[RM]};M[YK]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WT]|[RM]} 4.6482;3.9813;2.715;2.0552;1.4092;0.74935;0.33516 -;-;-;-;-;-;- 375 + 1 2.344 38432.5 1.0 1699 3963 5661 SUDHL4_400M_050219_1,5664 SUDHL4_400M_050219_1,5664,FASHVSPEV True True FASHVSPEV 29.080168 486.74263304472 5379196.5 5661.0 nc|ENSG00000242247|Q9NP61-2|ARFGAP3;;ENSG00000242247|ENST00000263245|ARFGAP3 5.290571371714274 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5665 29.094 800.0 111940.0 25 0 14389.0 + -1 ASTDYSTYSQA 11 137 618.2572610592836 1234.499969185367 2 618.2588989138603 MULTI CID FTMS 0 0 0 5661 82351.984375 1.0 0 0.0 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASTDYSTYSQA_ nc|ENSG00000182944|Q01844-6|EWSR1;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-2|EWSR1;ENSG00000182944|ENST00000397938|EWSR1 20.41453444215458 0.6105011870913812 5 {[CP]|[EA]}SEY 5 -1 21.242 0.0 0.0 1.7207 0.0 0.0 0.0 652.2589162891358 652.2589162891358 6.465912507003608 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {[CP]|[EA]}SEY 1.7207 - 268 1 2.344 72198.1 0.550000011920929 1700 3963 5661 SUDHL4_400M_050219_1,5665 SUDHL4_400M_050219_1,5665,ASTDYSTYSQA False False ASTDYSTYSQA 29.094004 618.25889891386 503167.1875 5661.0 nc|ENSG00000182944|Q01844-6|EWSR1;;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;;nc|ENSG00000182944|Q01844-5|EWSR1;;nc|ENSG00000182944|Q01844-4|EWSR1;;nc|ENSG00000182944|Q01844-3|EWSR1;;nc|ENSG00000182944|Q01844-2|EWSR1;;ENSG00000182944|ENST00000397938|EWSR1 6.504512310028076 2.0 True 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5666 29.097 163.0 439370.0 25 0 34998.0 + 31207 RLQESVMEA 9 82 531.7659500760777 1061.5173472189554 2 531.7676879763603 MULTI CID FTMS 0 0 0 5661 187578.125 0.1370285749037341 -11 0.2253093719482422 5 Unmodified _RLQESVMEA_ ENSG00000164754|ENST00000297338|RAD21 41.95555342248728 0.0647214845423414 5 ESVMEA 6 3 53.519 0.0 0.0 5.0417 0.0 0.0 397.24608046699376 0.0 397.24608046699376 0.0 39.7062251842808 0.0 0.0 0 1.0994850021680094 0.0 0.7742275032520141 0.0 + ESVMEA 5.0417 + + 144 1 2.344 60738.9 1.0 1701 3963 5661 SUDHL4_400M_050219_1,5666 SUDHL4_400M_050219_1,5666,RLQESVMEA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5669 29.108 214.0 469200.0 25 0 98006.0 + + -1 ASNDYTQQATQSYG 14 99 788.3319785696535 1574.649404206107 2 788.3323242068291 MULTI CID FTMS 0 0 0 5668 384262.96875 0.4803095736029267 -8 0.1708106994628906 1 Oxidation (M) _YSYM(Oxidation (M))RDYYDRQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 1.3295316138638542 0.8688751186870782 5 [DN]{[CP]|[EA]}YTQQA 9 -1 39.209 0.0 0.0 2.49 0.0 0.0 0.0 551.2121910817741 551.2121910817741 18.88646049317881 0.0 0.0 0.0 0 0.242992819099939 1.2218487496163564 1.25 1.2728787452803376 [DN]{[CP]|[EA]}YTQQA 2.49 - 1097 1 2.344 71168.1 1.0 1702 3965 5668 SUDHL4_400M_050219_1,5669 SUDHL4_400M_050219_1,5669,YSYMRDYYDRQ False False ASNDYTQQATQSYG 29.107847 788.332324206829 10225256.0 5668.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 5.415413061777751 2.0 False 14.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5670 29.122 800.0 157670.0 25 0 9290.3 + 31124 RLMAEDEEGY 10 133 606.7639857461976 1211.513418559195 2 606.7643920779228 MULTI CID FTMS 0 0 0 5668 113614.1953125 0.7742505788531334 -9 0.1844234466552734 2 Unmodified _RLMAEDEEGY_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 27.22323531849824 0.3570408936368626 5 {[WT]|[RM]}{I|L}AEDEEGY 10 2 + 63.18 0.0 0.0 5.215 5.215 88.948 0.0 0.0 0.0 3.0444970792913395 52.21085733450202 3.0444970792913395 10.413926851582254 0 1.0 0.0 0.3494850021680094 0.0 {[WT]|[RM]}{I|L}AEDEEGY;{[ET]|[MV]}{I|L}KEDEEGY;{[WT]|[RM]}{I|L}AEDEWY;{[WT]|[RM]}{I|L}[WE]EEGY;{[ET]|[MV]}{I|L}WWEEGY;[MN]{I|L}{I|L}EDEWY;{[WT]|[RM]}{I|L}AEDET[{M(Oxidation (M))|F}T];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A[YK][HT]EGY;{[WT]|[RM]}{I|L}AEDTE[{M(Oxidation (M))|F}T];{[QD]|[EN]|[WG]|[KD]|[RS]}C{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HT]EGY 5.215;4.3554;4.2631;3.8735;3.0139;2.7706;2.5534;2.4781;2.3049;2.0189 -;-;-;-;-;-;-;-;-;- 597 1 2.344 95110.0 0.6899999976158142 1703 3965 5668 SUDHL4_400M_050219_1,5670 SUDHL4_400M_050219_1,5670,RLMAEDEEGY False True RLMAEDEEGY 29.121679 606.764392077923 734804.0625 5668.0 ENSG00000080503|ENST00000349721|SMARCA2;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4;;nc|ENSG00000080503|P51531-2|SMARCA2 7.958412170410156 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5671 29.126 237.0 309570.0 25 0 45582.0 + + 27891 IQHPSNVL 8 110 454.2527213367734 906.4908897403468 2 454.2523986697197 MULTI CID FTMS 0 0 0 5668 122912.59375 0.8598955301622906 -2 0.0358905792236328 3 Unmodified _PLSLYCVI_ ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;nc|ENSG00000104824|P14866-2|HNRNPL;ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781237-34781759:-|nuORF;ENST00000595164.5_1_19:39327364-39331218:-|nuORF 23.1484247019978 0.5573009939494978 5 {I|L} 1 -1 13.979 0.0 0.0 1.5421 0.0 0.0 775.3958712850718 0.0 775.3958712850718 0.0 -4.615005783267996 -4.615005783267996 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5421 + + 69 + 1 2.344 64178.4 1.0 1704 3965 5668 SUDHL4_400M_050219_1,5671 SUDHL4_400M_050219_1,5671,PLSLYCVI False False IQHPSNVL 29.126104 454.25239866972 569685.125 5668.0 ENST00000595443.5_1_19:39327988-39329682:-|nuORF;;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;;nc|ENSG00000104824|P14866-2|HNRNPL;;ENSG00000104824|ENST00000221419|HNRNPL;;ENST00000568980.1_1_15:34781237-34781759:-|nuORF;;ENST00000595164.5_1_19:39327364-39331218:-|nuORF 0.4949209888776143 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5673 29.131 52.0 1341700.0 25 0 303420.0 + 3126 AVPPALRGP 9 60 439.2665232806816 876.5184936281631 2 439.2664062380791 MULTI CID FTMS 0 0 0 5672 1195188.25 0.1816639299772294 16 -0.4097957611083984 1 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 5 {[VA]|[{I|L}G]}PPA 5 -1 45.273 0.0 0.0 5.1651 0.0 0.0 0.0 438.24701880608194 438.24701880608194 29.330984399557423 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 5.1651 + + 22 + 1 2.344 61654.7 1.0 1705 3966 5672 SUDHL4_400M_050219_1,5673 SUDHL4_400M_050219_1,5673,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5674 29.145 800.0 108760.0 25 0 8084.3 + -1 PEGWDCNLSI 10 120 595.7583805491278 1189.5022081650554 2 595.7588378787041 MULTI CID FTMS 0 0 0 5672 94656.234375 0.5917761081444153 -9 0.1956996917724609 2 Carbamidomethyl (C) _PEGWDC(Carbamidomethyl (C))NLSI_ REV__ENSG00000188501|ENST00000695545|LCTL;REV__nc|ENSG00000188501|Q6UWM7-2|LCTL 3.944395688203298 0.708391353636983 5 DSS[HC]K{M(Oxidation (M))|F}{I|L}R 9 -1 39.917 0.0 0.0 3.3558 0.0 0.0 97.97785799030255 0.0 97.97785799030255 0.0 28.497329845488235 0.0 0.0 0 0.0 0.0 0.5 0.5610312860818771 DSS[HC]K{M(Oxidation (M))|F}{I|L}R 3.3558 - 181 + 1 2.344 68804.6 0.550000011920929 1706 3966 5672 SUDHL4_400M_050219_1,5674 SUDHL4_400M_050219_1,5674,PEGWDCNLSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5676 29.15 25.0 1622900.0 25 0 254540.0 -1 ECKECRKCFY 10 60 711.8000347131986 1421.585516493197 2 711.8000366091728 MULTI CID FTMS 0 0 0 5675 1959787.0 0.8293913214232209 1 -0.0159111022949218 1 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFY_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 6.723162845929126 0.6955379296933136 5 {[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y 12 -1 + 78.542 0.0 0.0 5.5249 5.5249 82.722 0.0 0.0 0.0 13.309932190414244 11.382353118286233 11.382353118286233 3.0102999566398125 0 1.3182503180159344 1.0969100130080565 0.0 0.4247425010840047 {[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQDQA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQ[AG]DA{M(Oxidation (M))|F}Y;{[DA]|[EG]}[AG]HEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEA[AG]QDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEA[AG]DQA{M(Oxidation (M))|F}Y;{[DA]|[EG]}[AG]HEAQDQA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQD[AG]A{M(Oxidation (M))|F}Y;[HD]EAQAQQDA{M(Oxidation (M))|F}Y;[HD]EAQAQDQA{M(Oxidation (M))|F}Y 5.5249;5.3132;4.8849;4.8849;4.8849;4.6732;4.6732;4.6732;4.5887;4.3769 -;-;-;-;-;-;-;-;-;- 871 1 2.344 34252.8 1.0 1707 3967 5675 SUDHL4_400M_050219_1,5676 SUDHL4_400M_050219_1,5676,ECKECRKCFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5677 29.157 372.0 442700.0 25 0 51167.0 + + 30006 TQFGGKRPF 9 143 518.778570884306 1035.5425888354118 2 519.2800781130791 MULTI CID FTMS 0 0 0 5675 228489.453125 0.2935353915160823 -11 0.2283153533935547 2 Unmodified _QTIIFCALAG_ ENSG00000041357|ENST00000044462|PSMA4;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4 15.847184025352805 0.5816416552707754 5 [QT]{M(Oxidation (M))|F} 3 -1 27.835 0.0 0.0 2.6879 0.0 0.0 0.0 656.343894337618 656.343894337618 11.636890462689143 0.0 0.0 0.0 0 0.4247425010840047 0.9208187539523752 0.535666875892183 0.2059771852360797 [QT]{M(Oxidation (M))|F} 2.6879 - 292 1 2.344 127492.3 1.0 1708 3967 5675 SUDHL4_400M_050219_1,5677 SUDHL4_400M_050219_1,5677,QTIIFCALAG False False TQFGGKRPF 29.156931 519.280078113079 4604944.0 5675.0 ENSG00000041357|ENST00000044462|PSMA4;;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;;nc|ENSG00000041357|P25789-2|PSMA4 4.904557387034099 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5678 29.161 218.0 283780.0 25 0 41240.0 -1 0 96 499.2753721626221 498.2680956960221 1 501.2825500369072 MULTI CID FTMS 0 0 0 5675 144327.359375 0.6204721564917404 4 -0.0475177764892578 3 5 H 1 -1 11.99 0.0 0.0 2.4063 0.0 0.0 343.20153488234865 0.0 343.20153488234865 0.0 1.2763625255165325 0.0 0.0 0 0.0 0.0 0.0 0.0 H 2.4063 - 11 + 1 2.344 50898.4 1.0 1709 3967 5675 SUDHL4_400M_050219_1,5678 SUDHL4_400M_050219_1,5678, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5681 29.17 122.0 312880.0 25 0 53720.0 + 31252 RLTTSTSTF 9 70 507.2670572709581 1012.519561608716 2 507.2672607302666 MULTI CID FTMS 0 0 0 5680 186710.265625 0.7387779933074182 -3 0.0389251708984375 1 Unmodified _RLTTSTSTF_ ENSG00000176171|ENST00000368636|BNIP3;ENST00000550043.1_1_14:28734103-28734340:+|nuORF 27.628801355627647 0.1796483985696185 5 TST{M(Oxidation (M))|F} 4 5 44.412 0.0 0.0 4.3863 0.0 0.0 558.3127308576187 0.0 558.3127308576187 0.0 29.69518814023204 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.0 + TST{M(Oxidation (M))|F} 4.3863 + + 61 1 2.344 35157.8 1.0 1710 3969 5680 SUDHL4_400M_050219_1,5681 SUDHL4_400M_050219_1,5681,RLTTSTSTF False True RLTTSTSTF 29.170091 507.267260730267 988136.875 5680.0 ENSG00000176171|ENST00000368636|BNIP3;;ENST00000550043.1_1_14:28734103-28734340:+|nuORF 1.6641459067662556 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5682 29.184 800.0 173220.0 25 0 43664.0 + 32327 RYLEVEPVSR 10 131 624.3414705158483 1246.6683880984965 2 624.3407470583916 MULTI CID FTMS 0 0 0 5680 105641.8203125 0.7846033005419051 -6 0.0997047424316406 2 Unmodified _RYLEVEPVSR_ ENSG00000133935|ENST00000256319|ERG28 36.39500950444726 0.1956349533321693 5 RY{I|L}E[{M(Oxidation (M))|F}V][HK]R 9 4 + 48.968 0.0 0.0 3.9279 3.9279 87.698 0.0 0.0 0.0 27.72030252683478 7.555152138570591 7.555152138570591 46.984309665802286 0 1.174742501084005 0.0 0.4247425010840047 0.5402877273156862 RY{I|L}E[{M(Oxidation (M))|F}V][HK]R;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[{I|L}V][QT]E{I|L}CVV 3.9279;0.15915 -;- 144 + 1 2.344 104335.1 0.7400000095367432 1711 3969 5680 SUDHL4_400M_050219_1,5682 SUDHL4_400M_050219_1,5682,RYLEVEPVSR False True RYLEVEPVSR 29.183928 624.340747058392 815493.0 5680.0 ENSG00000133935|ENST00000256319|ERG28 5.381688276926677 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5683 29.189 258.0 271650.0 25 0 37130.0 + 28630 PVGTKPNPR 9 99 483.2806474654024 0 483.2809326052666 PEAK CID FTMS 0 0 0 5680 120766.7265625 0.0733951934553925 -10 0.2092552185058593 3 Unmodified _PVGTKPNPR_ REV__ENSG00000102786|ENST00000311234|INTS6;REV__ENST00000504674.1_1_5:39720798-39721572:-|nuORF;REV__nc|ENSG00000102786|Q9UL03-3|INTS6 4.75600775471527 0.3444685223463735 5 D 1 -1 7.034 0.0 0.0 0.72926 0.0 0.0 481.3193077708453 365.1868685358032 846.5061763066485 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 D 0.72926 - 24 + 1 2.344 56031.5 1.0 1712 3969 5680 SUDHL4_400M_050219_1,5683 SUDHL4_400M_050219_1,5683,PVGTKPNPR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5686 29.197 33.0 1669000.0 25 0 278260.0 + 43583 YADVGGKQF 9 66 492.7430826870586 983.4716124409172 2 492.7429687380791 MULTI CID FTMS 0 0 0 5685 1683846.75 0.7722178737700973 5 -0.0548057556152343 1 Unmodified _YADVGGKQF_ ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF 71.92227651296345 0.0203558744033348 5 YADVGGKQ{M(Oxidation (M))|F} 9 0 + 96.371 0.0 0.0 9.7991 9.7991 86.114 0.0 0.0 0.0 59.12901210438582 12.252684618815096 12.252684618815096 0.4575749056067479 0 1.1861818737241734 2.0 0.0 1.0387254899964358 + + YADVGGKQ{M(Oxidation (M))|F};YADVNKQ{M(Oxidation (M))|F};YADVGGK[AG]{M(Oxidation (M))|F};YADVNK[AG]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VS][{I|L}T]D{[ES]|[DT]|[{I|L}C]} 9.7991;9.7526;8.5321;8.48;2.9877 +;-;-;-;- + 534 + 1 2.344 52245.8 1.0 1713 3971 5685 SUDHL4_400M_050219_1,5686 SUDHL4_400M_050219_1,5686,YADVGGKQF True True YADVGGKQF 29.197424 492.742968738079 21937258.0 5685.0 ENST00000485612.5_1_X:153061851-153063885:+|nuORF;;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;;ENSG00000180879|ENST00000370086|SSR4 8.112415472666422 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5687 29.199 34.0 1672300.0 25 0 246090.0 -1 ELMTLAHKH 9 79 548.2829799657695 1094.551406998339 2 548.2828857302666 MULTI CID FTMS 0 0 0 5685 1504512.75 1.0 0 0.0 2 Oxidation (M) _ELM(Oxidation (M))TLAHKH_ ENSG00000023734|ENST00000419869|STRAP;nc|ENSG00000023734|Q9Y3F4-2|STRAP 10.823927491677226 0.5436922275383211 5 SHPPEH[HK] 8 -1 49.976 0.0 0.0 4.5659 0.0 0.0 127.09993178535312 0.0 127.09993178535312 0.0 37.21180602364914 0.0 0.0 0 2.2302046884880937 0.0 0.7742275032520141 0.0 SHPPEH[HK] 4.5659 - 330 1 2.344 50386.6 1.0 1714 3971 5685 SUDHL4_400M_050219_1,5687 SUDHL4_400M_050219_1,5687,ELMTLAHKH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5688 29.201 97.0 527310.0 25 0 53316.0 + 26949 PEAKTTEPV 9 83 486.255198508216 970.495844083232 2 486.2543517947197 MULTI CID FTMS 0 0 0 5685 311355.4375 0.2832714782400628 63 -1.5398330688476562 3 Unmodified _PEAKTTEPV_ REV__ENSG00000126767|ENST00000376983|ELK1 15.847184025352805 0.4077185912009129 5 [{I|L}T]QS[TP]EPV 9 -1 + 58.35 0.0 0.0 6.0124 6.0124 88.816 0.0 0.0 0.0 12.730012720637376 10.413926851582254 10.413926851582254 9.030899869919438 0 0.0 2.0 0.4247425010840047 0.0 [{I|L}T]QS[TP]EPV;[{I|L}T]QD{[VA]|[{I|L}G]}EPV;[{I|L}T][AG]S[TP]EPV;[{I|L}T]QS[TP]EVP;[{I|L}T]E[TP]SQ[VP];[{I|L}T][AG]D{[VA]|[{I|L}G]}EPV;[{I|L}T]QD{[VA]|[{I|L}G]}EVP;[{I|L}T][AG]S[TP]EVP;[{I|L}T]E{[VA]|[{I|L}G]}DQ[VP];[{I|L}T]E[TP]S[AG][VP] 6.0124;5.0819;5.0636;4.9394;4.7007;4.133;4.0088;3.9905;3.7702;3.7519 -;-;-;-;-;-;-;-;-;- 158 + 1 2.344 47807.6 1.0 1715 3971 5685 SUDHL4_400M_050219_1,5688 SUDHL4_400M_050219_1,5688,PEAKTTEPV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5691 29.221 800.0 88166.0 25 0 5195.7 -1 LDMWQHHNFA 10 107 657.790126448052 1313.565699962904 2 657.7890502810478 MULTI CID FTMS 0 0 0 5690 74859.921875 0.8621466232387396 1 -0.0230274200439453 1 Oxidation (M) _LDM(Oxidation (M))WQHHNFA_ ENST00000379426.1_1_6:11576889-11576937:+|nuORF 9.38312468134398 0.6832340498775793 5 {[QG]|[NA]}G[HQ]EAQQ 9 -1 40.103 0.0 0.0 3.053 0.0 0.0 0.0 347.1348999054789 347.1348999054789 24.4408341705779 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.25 0.7302046884880937 {[QG]|[NA]}G[HQ]EAQQ 3.053 - 401 1 2.341 57276.4 0.699999988079071 1716 3973 5690 SUDHL4_400M_050219_1,5691 SUDHL4_400M_050219_1,5691,LDMWQHHNFA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5692 29.228 385.0 244530.0 25 0 21562.0 26761 PACPLVSLQ 9 133 464.2502755528564 0 464.2510558962822 PEAK CID FTMS 0 0 0 5690 123126.015625 0.7043352100255749 -3 0.0159034729003906 2 Unmodified _PACPLVSLQ_ ENST00000397406.5_1_11:844123-847263:+|nuORF;ENST00000525334.5_1_11:843618-847263:+|nuORF;ENST00000530404.5_3_11:843688-847263:+|nuORF 21.74664581756881 0.185237546287679 5 {I|L} 1 8 6.9897 0.0 0.0 0.75443 0.0 0.0 667.3321604701788 143.04659448795158 810.3787549581303 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.75443 + + 22 + 1 2.341 77248.6 1.0 1717 3973 5690 SUDHL4_400M_050219_1,5692 SUDHL4_400M_050219_1,5692,PACPLVSLQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5694 29.233 152.0 373090.0 25 0 66128.0 + -1 DNCFMARFY 9 77 612.2521389358108 1222.4897249384214 2 612.2517578005791 MULTI CID FTMS 0 0 0 5693 413775.15625 0.639966710221068 6 -0.2535324096679687 1 Carbamidomethyl (C) _DNC(Carbamidomethyl (C))FMARFY_ REV__ENSG00000114796|ENST00000242810|KLHL24;REV__ENSG00000172578|ENST00000341319|KLHL6;REV__ENST00000489245.5_1_3:183211997-183273441:-|nuORF;REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24 15.847184025352805 0.4077185912009129 5 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 -1 + 88.959 0.0 0.0 7.2768 7.2768 92.098 0.0 0.0 0.0 6.361529222010432 81.96903459784544 6.361529222010432 9.164539485499247 0 1.0 0.0 0.7059771852360797 0.7742275032520141 [HD]EAQQDA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]DA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQDA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[AG]QDA{M(Oxidation (M))|F}Y;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[AG]DA{M(Oxidation (M))|F}Y;[AG][PG][HC]WDA{M(Oxidation (M))|F}Y 7.2768;6.5272;6.5272;5.1472;5.0204;4.2707;4.2707;3.4211 -;-;-;-;-;-;-;- 348 1 2.341 49274.2 1.0 1718 3974 5693 SUDHL4_400M_050219_1,5694 SUDHL4_400M_050219_1,5694,DNCFMARFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5695 29.238 240.0 232990.0 25 0 33616.0 + + 43993 YLVSHPNEV 9 89 529.2684900872874 1056.5224272413748 2 529.2702514529228 MULTI CID FTMS 0 0 0 5693 134521.796875 1.0 0 0.0 2 Unmodified _YIDHVPVSQ_ ENSG00000143815|ENST00000272163|LBR;ENST00000424022.2_1_1:225594357-225599062:-|nuORF 19.256988751693697 0.3154191944385105 5 Y{I|L} 2 -1 40.969 0.0 0.0 3.8777 0.0 0.0 0.0 777.3589571588499 777.3589571588499 30.0 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 Y{I|L} 3.8777 + + 39 + 1 2.341 51152.0 1.0 1719 3974 5693 SUDHL4_400M_050219_1,5695 SUDHL4_400M_050219_1,5695,YIDHVPVSQ False False YLVSHPNEV 29.237619 529.270251452923 775496.1875 5693.0 ENSG00000143815|ENST00000272163|LBR;;ENST00000424022.2_1_1:225594357-225599062:-|nuORF 1.6071402231852214 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5696 29.244 357.0 189200.0 25 0 13227.0 + 52 AAAYPHTSL 9 108 465.7378913272959 929.461229721392 2 465.7373535037041 MULTI CID FTMS 0 0 0 5693 92641.296875 0.6983025212083267 -5 0.0625152587890625 3 Unmodified _AAAYPHTSL_ ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE 24.67388899826682 0.2172451872415813 5 AAA 3 6 25.942 0.0 0.0 2.7911 0.0 0.0 0.0 713.3260880800434 713.3260880800434 5.764837301042718 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + AAA 2.7911 + + 85 1 2.341 57253.7 1.0 1720 3974 5693 SUDHL4_400M_050219_1,5696 SUDHL4_400M_050219_1,5696,AAAYPHTSL False True AAAYPHTSL 29.244053 465.737353503704 987200.5625 5693.0 ENSG00000142599|ENST00000400908|RERE;;nc|ENSG00000142599|Q9P2R6-2|RERE 5.632545471191406 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5699 29.252 86.0 580680.0 25 0 33051.0 + 30406 RAVPVGSGL 9 86 428.2561733567344 854.4977937802687 2 428.2561218142509 MULTI CID FTMS 0 0 0 5698 486324.0625 0.7774018132683479 -2 0.0198860168457031 1 Unmodified _RAVPVGSGL_ ENSG00000043514|ENST00000316891|TRIT1;nc|ENSG00000043514|Q9H3H1-4|TRIT1;nc|ENSG00000043514|Q9H3H1-5|TRIT1 39.94969957227396 0.0757326808254658 5 {[VA]|[{I|L}G]}RPVGSG{I|L} 9 2 + 61.966 0.0 0.0 7.2517 7.2517 95.609 0.0 0.0 0.0 12.67606240177031 50.577053078093215 12.67606240177031 19.869116261926926 0 1.416386562212267 1.3010299956639813 0.0 0.0 {[VA]|[{I|L}G]}RPVGSG{I|L};[VP]{[NV]|[RG]}{I|L}GSG{I|L};[VP]QVRSG{I|L};{[VA]|[{I|L}G]}[PG]VRSG{I|L};{[VA]|[{I|L}G]}RPV[NS]{I|L};[VP][AG]VRSG{I|L};[VP]QVVG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}[PG]VVG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[VP]{[NV]|[RG]}{I|L}[NS]{I|L};{[VA]|[{I|L}G]}[DP][RK]G{I|L} 7.2517;4.9265;4.9215;4.1147;4.0978;3.8376;2.707;1.9002;1.7725;1.6685 -;-;-;-;-;-;-;-;-;- 185 1 2.341 45904.9 1.0 1721 3976 5698 SUDHL4_400M_050219_1,5699 SUDHL4_400M_050219_1,5699,RAVPVGSGL True True RAVPVGSGL 29.25223 428.256121814251 3115521.5 5698.0 nc|ENSG00000043514|Q9H3H1-4|TRIT1;;ENSG00000043514|ENST00000316891|TRIT1;;nc|ENSG00000043514|Q9H3H1-5|TRIT1 4.025418758392334 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5700 29.266 800.0 190850.0 25 0 16079.0 + 43960 YGYGHESEL 9 181 527.7270899120736 1053.439626890947 2 527.7272216677666 MULTI CID FTMS 0 0 0 5698 78236.4609375 0.3148454044643221 -3 0.0429134368896484 2 Unmodified _YGYGHESEL_ ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000239306|Q96PK6-5|RBM14 54.773552608820026 0.0299037012502309 5 YGYGS{M(Oxidation (M))|F}PTY 9 5 + 60.615 0.0 0.0 5.754 5.754 80.773 0.0 0.0 0.0 26.06424796730412 1.0071123335628585 1.0071123335628585 1.0071123335628585 0 0.5752574989159953 0.958607314841775 0.6505149978319906 0.0 YGYGS{M(Oxidation (M))|F}PTY;YGYGS{M(Oxidation (M))|F}T{M(Oxidation (M))|F}{I|L};YGYGS{M(Oxidation (M))|F}TPY;YGY[YQ]PTY;YGY[YQ]T{M(Oxidation (M))|F}{I|L};YGYGS{M(Oxidation (M))|F}TYP;YGY[YQ]TPY;YGYGS{M(Oxidation (M))|F}[DV]{M(Oxidation (M))|F};Y[YN]S{M(Oxidation (M))|F}PTY;Y[YN]S{M(Oxidation (M))|F}T{M(Oxidation (M))|F}{I|L} 5.754;5.6584;5.4682;4.5021;4.4065;4.2461;4.2164;3.9795;3.522;3.4264 -;-;-;-;-;-;-;-;-;- 2111 + 1 2.341 122527.1 0.800000011920929 1722 3976 5698 SUDHL4_400M_050219_1,5700 SUDHL4_400M_050219_1,5700,YGYGHESEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5701 29.28 800.0 175060.0 25 0 15424.0 + 15936 ISYPSPYFGNQ 11 115 636.7969586110352 1271.5793642888702 2 636.7961913943291 MULTI CID FTMS 0 0 0 5698 91230.1015625 0.1701107773415699 -3 0.0429134368896484 3 Unmodified _ISYPSPYFGNQ_ REV__ENSG00000153250|ENST00000348849|RBMS1;REV__nc|ENSG00000153250|P29558-2|RBMS1 28.49450938151212 0.4231428536161201 5 {[TV]|[{I|L}S]}YPGNSD 8 -1 71.918 0.0 0.0 5.6558 0.0 0.0 0.0 435.2009841036031 435.2009841036031 61.20419729680272 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.3807196863200844 0.75 {[TV]|[{I|L}S]}YPGNSD 5.6558 - 455 + 1 2.341 107539.7 0.8100000023841858 1723 3976 5698 SUDHL4_400M_050219_1,5701 SUDHL4_400M_050219_1,5701,ISYPSPYFGNQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5702 29.294 800.0 118380.0 25 0 4305.7 + -1 LNDLQDKMQF 10 137 634.3034584979658 1266.5923640627316 2 634.3029052615166 MULTI CID FTMS 0 0 0 5698 124459.453125 0.3847696822509867 -5 0.0548057556152343 4 Oxidation (M) _LNDLQDKM(Oxidation (M))QF_ REV__ENSG00000136634|ENST00000423557|IL10 45.69961567697781 0.105390671673896 5 [AG]K{I|L}EEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 11 -1 + 92.253 0.0 0.0 7.2835 7.2835 89.968 0.0 0.0 0.0 8.513973451939066 16.57577319177794 8.513973451939066 6.264100213633768 0 1.1237125054200234 1.3979400086720375 1.7070683865866922 1.2346368802282015 [AG]K{I|L}EEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KEEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}EEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}EEQA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[AG]K{I|L}EE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KA]G{I|L}EEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KEEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KEEQA{M(Oxidation (M))|F}[AG]{M(Oxidation (M))|F};[AG]{I|L}KEE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}EE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 7.2835;6.789;6.6113;6.5628;6.5628;6.251;6.1168;6.0683;6.0683;5.8878 -;-;-;-;-;-;-;-;-;- 2461 1 2.341 75540.3 0.8799999952316284 1724 3976 5698 SUDHL4_400M_050219_1,5702 SUDHL4_400M_050219_1,5702,LNDLQDKMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5704 29.31 800.0 91633.0 25 0 7055.4 + + -1 NDMRQEYEQL 10 116 671.297806562061 1340.581060190922 2 671.2916747927666 MULTI CID FTMS 0 0 0 5703 79979.828125 0.6483297182790864 12 -0.4554176330566406 1 2 Carbamidomethyl (C) _HICAC(Carbamidomethyl (C))TC(Carbamidomethyl (C))VHQL_ ENSG00000171403|ENST00000246662|KRT9;P35527 9.38312468134398 0.8308777417566128 5 [AG]{I|L}[C(Carbamidomethyl (C))M]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE[Q{I|L}] 11 -1 + 20.211 0.0 0.0 1.5077 1.5077 78.485 0.0 0.0 0.0 4.013419739278895 7.050694855352237 4.013419739278895 8.002448227465258 0 0.0 1.0969100130080565 0.0 0.3054621874040891 [AG]{I|L}[C(Carbamidomethyl (C))M]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE[Q{I|L}];[Q{I|L}][C(Carbamidomethyl (C))M]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE[K{I|L}];[YT][HM]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE[K{I|L}];{[WT]|[RM]}TY{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HM][{M(Oxidation (M))|F}V] 1.5077;0.91071;0.59296;0.14386 -;-;-;- 240 1 2.341 57038.3 0.5899999737739563 1725 3977 5703 SUDHL4_400M_050219_1,5704 SUDHL4_400M_050219_1,5704,HICACTCVHQL False False NDMRQEYEQL 29.309575 671.291674792767 507205.40625 5703.0 ENSG00000171403|ENST00000246662|KRT9;;P35527 2.9819866021474204 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5705 29.318 477.0 206370.0 25 0 25706.0 + 15618 IQEESLRTY 9 84 569.790084421447 1137.565615909694 2 569.7906982302666 MULTI CID FTMS 0 0 0 5703 144443.671875 0.7483412572033066 -2 0.0494728088378906 2 Unmodified _IQEESLRTY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 63.22749603027936 0.0242951379232427 5 {I|L}QEES{I|L}RTY 9 0 + 84.969 0.0 0.0 7.4693 7.4693 93.321 0.0 0.0 0.0 71.25721464189758 13.46787486224656 13.46787486224656 9.208187539523747 0 1.3807196863200843 0.0 1.6382104921644451 0.4247425010840047 + + {I|L}QEES{I|L}RTY;{I|L}[AG]EES{I|L}RTY;{I|L}QE[TP]MRTY;{I|L}[AG]E[TP]MRTY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}RR[YQ]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 7.4693;6.6599;5.4124;4.603;0.055701 +;-;-;-;- + 134 + 1 2.341 75528.2 1.0 1726 3977 5703 SUDHL4_400M_050219_1,5705 SUDHL4_400M_050219_1,5705,IQEESLRTY True True IQEESLRTY 29.318015 569.790698230267 1177724.0 5703.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 6.100450197855632 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5706 29.332 800.0 154200.0 25 0 8147.2 + + 8770 RQFAAQTVGNTY 12 132 678.3383205433931 1354.6620881535862 2 678.3367797732353 MULTI CID FTMS 0 0 0 5703 137668.609375 0.4788116342629234 -2 0.0494728088378906 3 Unmodified _EVSWVVHHVTY_ ENSG00000144224|ENST00000272638|UBXN4 18.1463463914782 0.6576820063886638 5 {[QS]|[NT]}GVT[KT]TVGNTY 13 -1 + 90.048 0.0 0.0 6.6473 6.6473 89.203 0.0 0.0 0.0 6.938652556024664 16.642078980768062 6.938652556024664 6.938652556024664 0 0.7302046884880938 1.0 1.95205343810445 0.781234684152075 {[QS]|[NT]}GVT[KT]TVGNTY;{[TV]|[{I|L}S]}[KC]AAQTVGNTY;{[QS]|[NT]}GVT[KT]TVGGGTY;[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAQTVGNTY;[NP][YK]AQTVGNTY;{[TV]|[{I|L}S]}[KC]AA[AG]TVGNTY;{[TV]|[{I|L}S]}[KC]AAQTVGGGTY;{[TV]|[{I|L}S]}[KC]AAQTRNTY;[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAQTVGGGTY;[VG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AA[AG]TVGNTY 6.6473;6.1351;5.9775;5.8823;5.6144;5.4653;5.4653;5.3637;5.2126;5.2126 -;-;-;-;-;-;-;-;-;- 3256 1 2.341 90496.9 0.699999988079071 1727 3977 5703 SUDHL4_400M_050219_1,5706 SUDHL4_400M_050219_1,5706,EVSWVVHHVTY False False RQFAAQTVGNTY 29.331854 678.336779773235 1373664.375 5703.0 ENSG00000144224|ENST00000272638|UBXN4 8.228057384490967 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5708 29.337 142.0 793100.0 25 0 121410.0 + 1321 AIVVGGKG 8 108 350.721217116671 0 350.7213928103447 PEAK CID FTMS 0 0 0 5707 707402.5625 0.1847634108393097 -3 0.0875167846679687 1 Unmodified _AIVVGGKG_ REV__ENSG00000188011|ENST00000343216|RTP5;REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF 19.438996006549623 0.4285751805470146 5 {I|L}{I|L}E 3 -1 15.93 0.0 0.0 2.2776 0.0 0.0 71.03507231752333 270.15818201236567 341.193254329889 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}{I|L}E 2.2776 - 30 + 1 2.341 95598.4 1.0 1728 3978 5707 SUDHL4_400M_050219_1,5708 SUDHL4_400M_050219_1,5708,AIVVGGKG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5709 29.35 800.0 37120.0 25 0 10606.0 -1 0 28 1186.1423365962069 3555.405180388821 3 1186.473193347454 MULTI CID FTMS 0 0 0 -1 0 2 5 G 1 -1 6.9897 0.0 0.0 0.19659 0.0 0.0 2147.7532771679207 1347.6123014844604 3495.3655786523814 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19659 - 1 + 1 2.341 34415.2 0.5199999809265137 1729 3978 5707 SUDHL4_400M_050219_1,5709 SUDHL4_400M_050219_1,5709, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5710 29.364 800.0 55653.0 25 0 2771.7 14464 IFYQFLYNNNT 11 79 718.8446533083916 0 718.8446533083916 PEAK CID FTMS 0 0 0 -1 0 3 Unmodified _IFYQFLYNNNT_ ENSG00000178691|ENST00000322652|SUZ12 8.155526934196011 0.4672964927559179 5 {I|L}{M(Oxidation (M))|F}GD 4 9 21.938 0.0 0.0 1.5281 0.0 0.0 234.0976341851136 766.3499239557249 1000.4475581408384 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}GD 1.5281 - 51 + 1 2.341 39254.3 0.7400000095367432 1730 3978 5707 SUDHL4_400M_050219_1,5710 SUDHL4_400M_050219_1,5710,IFYQFLYNNNT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5711 29.378 800.0 85049.0 25 0 21258.0 40158 VGNLTVFFSAL 11 86 584.324583488913 0 584.3234741091728 PEAK CID FTMS 0 0 0 5707 84045.046875 1.0 0 0.0 4 Unmodified _VGNLTVFFSAL_ ENSG00000023839|ENST00000647814|ABCC2 5.731851221503515 0.47618401536486 5 MY 2 11 7.9588 0.0 0.0 0.6822 0.0 0.0 601.375137878759 268.13105188541255 869.5061897641715 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MY 0.6822 - 16 + 1 2.341 55257.5 0.75 1731 3978 5707 SUDHL4_400M_050219_1,5711 SUDHL4_400M_050219_1,5711,VGNLTVFFSAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5712 29.392 800.0 99924.0 25 0 12617.0 -1 EQMKVYKCEHC 11 82 756.3232299685478 0 756.3232299685478 PEAK CID FTMS 0 0 0 -1 0 5 2 Carbamidomethyl (C) _EQMKVYKC(Carbamidomethyl (C))EHC(Carbamidomethyl (C))_ ENSG00000185811|ENST00000331340|IKZF1;nc|ENSG00000185811|Q13422-2|IKZF1;nc|ENSG00000185811|Q13422-3|IKZF1;nc|ENSG00000185811|Q13422-4|IKZF1;nc|ENSG00000185811|Q13422-5|IKZF1;nc|ENSG00000185811|Q13422-6|IKZF1;nc|ENSG00000185811|Q13422-7|IKZF1 4.897010918128616 0.4761840153648597 5 EQM 3 -1 20.807 0.0 0.0 1.3774 0.0 0.0 936.3886663070494 183.0781954401 1119.4668617471496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.5629529932484498 EQM 1.3774 + + 135 + 1 2.341 65214.9 0.6800000071525574 1732 3978 5707 SUDHL4_400M_050219_1,5712 SUDHL4_400M_050219_1,5712,EQMKVYKCEHC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5714 29.396 67.0 936600.0 25 0 212210.0 + 3127 AVPPALRGP 9 59 439.2665232806816 876.5184936281631 2 439.2663452029228 MULTI CID FTMS 0 0 0 5713 1013169.0 0.1539977173228565 29 -0.6443004608154297 1 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 5 {[VA]|[{I|L}G]}PPA 5 -1 45.273 0.0 0.0 5.1651 0.0 0.0 0.0 438.2480043921528 438.2480043921528 35.652121138338586 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 5.1651 + + 24 + 1 2.323 56080.3 1.0 1733 3979 5713 SUDHL4_400M_050219_1,5714 SUDHL4_400M_050219_1,5714,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5715 29.404 433.0 371890.0 25 0 121180.0 + 31208 RLQESVMEA 9 129 531.7659500760777 1061.5173472189554 2 531.7657958865166 MULTI CID FTMS 0 0 0 5713 218997.25 0.1599807071071682 5 -0.2035446166992187 2 Unmodified _RLQESVMEA_ ENSG00000164754|ENST00000297338|RAD21 34.93206674587334 0.1032771302489716 5 {[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}ESVMEA 10 2 + 52.33 0.0 0.0 4.9297 4.9297 77.974 0.0 0.0 0.0 2.420299789533402 38.35016244829767 2.420299789533402 0.7918124604762511 0 1.0 1.0457574905606752 0.4247425010840047 0.0 {[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}ESVMEA;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}DTVMEA;AA[RV]ESVMEA;AA[RV]DTVMEA;[VS][RD][VG]VMEA;[PG][R{M(Oxidation (M))|F}]RVMEA;[VP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VG]VMEA;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}ESP{[{M(Oxidation (M))|F}D]|MM}A;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}E[WM]EA;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}DTP{[{M(Oxidation (M))|F}D]|MM}A 4.9297;4.8551;3.5307;3.4561;3.3774;2.741;2.4973;2.0819;2.0313;2.0073 -;-;-;-;-;-;-;-;-;- 501 1 2.323 121921.8 1.0 1734 3979 5713 SUDHL4_400M_050219_1,5715 SUDHL4_400M_050219_1,5715,RLQESVMEA True True RLQESVMEA 29.404052 531.765795886517 12245310.0 5713.0 ENSG00000164754|ENST00000297338|RAD21 5.494574069976807 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5716 29.411 390.0 289750.0 25 0 20360.0 + 1948 AMNGHVPAV 9 144 448.2262775242853 894.4380021153706 2 448.2264892458916 MULTI CID FTMS 0 0 0 5713 89479.6015625 0.8410474955766282 3 -0.1445541381835937 3 Unmodified _AMNGHVPAV_ ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1 24.67388899826682 0.2172451872415813 5 V 1 8 13.979 0.0 0.0 1.5629 0.0 0.0 777.3582729667363 0.0 777.3582729667363 0.0 -13.460696996448576 -13.460696996448576 0.0 0 0.0 0.0 0.0 0.0 + V 1.5629 + + 180 + 1 2.323 91338.8 1.0 1735 3979 5713 SUDHL4_400M_050219_1,5716 SUDHL4_400M_050219_1,5716,AMNGHVPAV False True AMNGHVPAV 29.411031 448.226489245892 955246.0625 5713.0 nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;;ENSG00000131503|ENST00000360839|ANKHD1 5.880645275115967 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5717 29.425 800.0 125270.0 25 0 18525.0 + -1 YSYMRDYYDRQ 11 107 788.3319785696535 1574.649404206107 2 788.3300659060478 MULTI CID FTMS 0 0 0 5713 182716.65625 0.2283867205291039 6 -0.2334060668945312 4 Oxidation (M) _YSYM(Oxidation (M))RDYYDRQ_ REV__ENSG00000092199|ENST00000553300|HNRNPC;REV__ENST00000556181.1_1_14:58988169-58988316:+|nuORF;REV__nc|ENSG00000092199|P07910-3|HNRNPC;REV__nc|ENSG00000092199|P07910-4|HNRNPC;REV__nc|ENSG00000092199|P07910|HNRNPC 1.3295316138638542 0.8688751186870782 5 [QA]DDYTQQA 9 -1 23.967 0.0 0.0 1.522 0.0 0.0 0.0 551.2118791419069 551.2118791419069 3.949474761277475 0.0 0.0 0.0 0 0.0 0.638272163982407 1.024227503252014 1.0228787452803376 [QA]DDYTQQA 1.522 - 1060 1 2.323 72028.7 0.9700000286102296 1736 3979 5713 SUDHL4_400M_050219_1,5717 SUDHL4_400M_050219_1,5717,YSYMRDYYDRQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5718 29.439 798.0 201690.0 25 0 16703.0 + 35342 STDGPLRCTP 10 170 523.7506142169802 0 523.7515746951103 PEAK CID FTMS 0 0 0 5713 158354.0 0.9786525789988224 -2 0.0981616973876953 5 Unmodified _STDGPLRCTP_ REV__ENST00000355485.6_1_1:116234212-116234524:+|nuORF 36.12702656103203 0.1519005573994188 5 MSAQ{I|L}Q 6 -1 31.129 0.0 0.0 2.9774 0.0 0.0 188.0781297922768 196.0734804742797 384.1516102665565 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.805462187404089 0.0 MSAQ{I|L}Q 2.9774 - 329 + 1 2.323 125179.9 1.0 1737 3979 5713 SUDHL4_400M_050219_1,5718 SUDHL4_400M_050219_1,5718,STDGPLRCTP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5719 29.453 800.0 144360.0 25 0 34233.0 -1 0 58 1163.4641565415436 3487.370640224831 3 1163.798632800579 MULTI CID FTMS 0 0 0 5713 152950.046875 0.3450586424670726 -3 0.1439151763916015 6 5 V[YG]VTV 6 -1 17.797 0.0 0.0 0.51032 0.0 0.0 2368.8419059492435 497.1462191217407 2865.988125070984 0.0 0.0 0.0 0.0 0 0.0 0.0 1.079689690656103 0.0 V[YG]VTV 0.51032 - 149 + 1 2.323 99487.7 0.7099999785423279 1738 3979 5713 SUDHL4_400M_050219_1,5719 SUDHL4_400M_050219_1,5719, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5720 29.466 800.0 376880.0 25 0 76485.0 + 37919 TLYEHNNEL 9 188 566.7673089625091 1131.520064991818 2 567.2679321169853 MULTI CID FTMS 0 0 0 5713 127002.7734375 0.0427296638788132 -4 0.1476345062255859 7 Unmodified _TLYEHNNEL_ ENSG00000094914|ENST00000209873|AAAS;ENST00000548880.1_1_12:53709415-53715282:-|nuORF;nc|ENSG00000094914|Q9NRG9-2|AAAS 114.18643581695662 0.0037801735748066 5 [HN]NEYE{I|L}T{I|L} 9 7 + 60.459 0.0 0.0 5.3432 5.3432 78.414 0.0 0.0 0.0 0.1365326363922179 8.925449767853308 0.1365326363922179 0.1365326363922179 0 0.0 0.0 0.5554621874040891 1.7614393726401687 [HN]NEYE{I|L}T{I|L};{[YC]|[HE]}NNYE{I|L}T{I|L};{[YC]|[HE]}YNNE{I|L}T{I|L};[HN]ENYE{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEYE{I|L}T{I|L};[HN]NEYT{I|L}E{I|L};{[YC]|[HE]}NNYT{I|L}E{I|L};[HN]NEEY{I|L}T{I|L};{[YC]|[HE]}NNEY{I|L}T{I|L};{[YC]|[HE]}YNNT{I|L}E{I|L} 5.3432;5.3311;5.2168;5.1425;5.0504;5.0456;5.0335;5.0208;5.0087;4.9192 -;-;-;-;-;-;-;-;-;- 8455 1 2.323 223581.7 0.9800000190734864 1739 3979 5713 SUDHL4_400M_050219_1,5720 SUDHL4_400M_050219_1,5720,TLYEHNNEL True True TLYEHNNEL 29.466368 567.267932116985 82998498.0 5713.0 nc|ENSG00000094914|Q9NRG9-2|AAAS;;ENSG00000094914|ENST00000209873|AAAS;;ENST00000548880.1_1_12:53709415-53715282:-|nuORF 5.394272963205974 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5721 29.482 800.0 105690.0 25 0 12190.0 + 36112 SVSDAVATY 9 83 912.4312512511772 911.423974784577 1 912.770068347454 MULTI CID FTMS 0 0 0 5713 97004.5 0.6066714542758728 1 -0.089731216430664 8 Unmodified _SVSDAVATY_ ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133235217-133253139:-|nuORF;ENST00000539215.5_1_12:133249167-133250211:-|nuORF 64.23631603340823 0.0237365939569086 5 WWSVATY 7 4 + 60.256 0.0 0.0 6.6112 6.6112 88.305 0.0 0.0 0.0 10.579919469776868 39.00900915657069 10.579919469776868 5.981362441963334 0 0.6861818737241735 1.0 1.774227503252014 0.0 WWSVATY;WWSAVTY;WWSATVY;WWASVTY;WWASTVY;WWATSVY;WWA{I|L}{[CA]|SS}Y;[MD]SPKATY;[{I|L}V][DG]{[CA]|SS}ATY;[QP][VS]{M(Oxidation (M))|F}ATY 6.6112;5.9549;4.8345;4.7892;3.6688;3.4925;2.6005;2.5509;2.5015;2.4708 -;-;-;-;-;-;-;-;-;- 772 1 2.323 63709.8 0.8199999928474426 1740 3979 5713 SUDHL4_400M_050219_1,5721 SUDHL4_400M_050219_1,5721,SVSDAVATY True True SVSDAVATY 29.481676 912.770068347454 630826.5625 5713.0 ENSG00000177084|ENST00000320574|POLE;;ENST00000537064.5_1_12:133235217-133253139:-|nuORF;;ENST00000539215.5_1_12:133249167-133250211:-|nuORF 2.489691178003947 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5723 29.487 103.0 633970.0 25 0 75331.0 + -1 EHNCVKLVP 9 75 548.2829799657695 1094.551406998339 2 548.2831909060478 MULTI CID FTMS 0 0 0 5722 590318.125 0.3923649866044671 9 -0.2675247192382812 1 Carbamidomethyl (C) _EHNC(Carbamidomethyl (C))VKLVP_ REV__ENSG00000139734|ENST00000400324|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-4|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-5|DIAPH3;REV__nc|ENSG00000139734|Q9NSV4-6|DIAPH3 11.640296217721598 0.521594087909532 5 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 -1 36.756 0.0 0.0 3.3581 0.0 0.0 0.0 280.1320894830688 280.1320894830688 20.814243664528576 0.0 0.0 0.0 0 1.274227503252014 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 3.3581 - 331 + 1 2.294 58379.4 1.0 1741 3980 5722 SUDHL4_400M_050219_1,5723 SUDHL4_400M_050219_1,5723,EHNCVKLVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5724 29.492 266.0 426100.0 25 0 31976.0 + 1689 ALPEVQKQV 9 136 506.29604465263554 1010.5775363720712 2 506.2962524294853 MULTI CID FTMS 0 0 0 5722 269404.53125 0.5784769633046927 1 -0.019439697265625 2 Unmodified _ALPEVQKQV_ ENST00000405489.7_2_2:27435269-27435350:+|nuORF 36.12702656103203 0.0967173616627612 5 [{I|L}A]PEVQKQV 9 0 + 52.424 0.0 0.0 5.1875 5.1875 82.137 0.0 0.0 0.0 20.57959879366997 7.458320199781895 7.458320199781895 3.4678748622465605 0 0.3252574989159953 2.0 0.0 0.6861818737241735 + + [{I|L}A]PEVQKQV;[{I|L}A]PEVGAKQV;[{I|L}A]V[EP]QKQV;[{I|L}A]V[EP]GAKQV;[{I|L}A]PEVQK[AG]V;[{I|L}A]PEVGAK[AG]V;[{I|L}A]V[EP]QK[AG]V;[{I|L}A]V[EP]GAK[AG]V 5.1875;4.8444;4.4718;4.1286;4.0177;3.6788;3.3019;2.9631 +;-;-;-;-;-;-;- + 580 + 1 2.294 91440.9 1.0 1742 3980 5722 SUDHL4_400M_050219_1,5724 SUDHL4_400M_050219_1,5724,ALPEVQKQV True True ALPEVQKQV 29.492087 506.2957 3011107.75 5722.0 ENST00000405489.7_2_2:27435269-27435350:+|nuORF 7.750214735666911 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5725 29.501 510.0 301730.0 25 0 41430.0 + -1 PNEKQCHPCFY 11 151 711.8000347131986 1421.585516493197 2 711.8004638552666 MULTI CID FTMS 0 0 0 5722 472792.34375 0.2000880027990767 14 -0.434600830078125 3 Carbamidomethyl (C) _PNEKQC(Carbamidomethyl (C))HPCFY_ REV__ENSG00000109674|ENST00000264596|NEIL3 16.149105407346934 0.6992268271266642 5 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y 13 -1 + 133.18 0.0 0.0 9.3685 9.3685 86.805 0.0 0.0 0.0 5.055618632100163 16.642078980768076 5.055618632100163 1.1136592941902563 0 1.1989700043360187 1.154901959985743 2.2416440611282624 2.1989700043360187 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGAAGDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGAGADA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAGAQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAAGDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQAGDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAGADA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQGADA{M(Oxidation (M))|F}Y 9.3685;9.2901;9.243;9.0128;9.0081;9.0072;8.9345;8.9279;8.8874;8.8808 -;-;-;-;-;-;-;-;-;- 46054 1 2.294 110746.2 1.0 1743 3980 5722 SUDHL4_400M_050219_1,5725 SUDHL4_400M_050219_1,5725,PNEKQCHPCFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5727 29.507 188.0 272630.0 25 0 13637.0 + 2200 AQAPPTAQL 9 99 448.7457530056865 895.476953078173 2 448.7456237673759 MULTI CID FTMS 0 0 0 5726 249651.140625 0.5619173259137252 -2 0.109170913696289 1 Unmodified _AQAPPTAQL_ ENSG00000118513|ENST00000341911|MYB;nc|ENSG00000118513|P10242-10|MYB;nc|ENSG00000118513|P10242-11|MYB;nc|ENSG00000118513|P10242-12|MYB;nc|ENSG00000118513|P10242-2|MYB;nc|ENSG00000118513|P10242-3|MYB;nc|ENSG00000118513|P10242-5|MYB;nc|ENSG00000118513|P10242-6|MYB;nc|ENSG00000118513|P10242-7|MYB;nc|ENSG00000118513|P10242-8|MYB;nc|ENSG00000118513|P10242-9|MYB;nc|ENSG00000118513|P10242|MYB 53.832793166522166 0.0319663582346103 5 [PA][TP]AQAQ{I|L} 9 4 + 28.038 0.0 0.0 3.1311 3.1311 73.812 0.0 0.0 0.0 8.023306858447938 8.601132908511602 8.023306858447938 1.1263423094075478 0 0.535666875892183 0.494850021680094 1.66944517631652 0.0 [PA][TP]AQAQ{I|L};[PA][TP]QAAQ{I|L};[PA][TP]AGAAQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A[KS][KG]{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[KT][{M(Oxidation (M))|F}E]{I|L} 3.1311;3.0053;2.9916;0.68;0.59268 -;-;-;-;- 171 1 2.294 44388.8 1.0 1744 3981 5726 SUDHL4_400M_050219_1,5727 SUDHL4_400M_050219_1,5727,AQAPPTAQL True True AQAPPTAQL 29.506695 448.745623767376 8486074.0 5726.0 nc|ENSG00000118513|P10242-10|MYB;;nc|ENSG00000118513|P10242-3|MYB;;nc|ENSG00000118513|P10242-9|MYB;;nc|ENSG00000118513|P10242-12|MYB;;nc|ENSG00000118513|P10242|MYB;;nc|ENSG00000118513|P10242-6|MYB;;ENSG00000118513|ENST00000341911|MYB;;nc|ENSG00000118513|P10242-8|MYB;;nc|ENSG00000118513|P10242-5|MYB;;nc|ENSG00000118513|P10242-7|MYB;;nc|ENSG00000118513|P10242-11|MYB;;nc|ENSG00000118513|P10242-2|MYB 7.204296271006267 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5728 29.509 97.0 673120.0 25 0 88410.0 + 12213 GQTKPVVVY 9 104 495.7846302768809 989.554707620562 2 495.7848693728447 MULTI CID FTMS 0 0 0 5726 587178.0 0.9314883451522064 1 -0.0353832244873046 2 Unmodified _GQTKPVVVY_ chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS 41.8396318013385 0.0653578398400075 5 [VP]VKT{[QG]|[NA]}VY 9 6 + 46.721 0.0 0.0 4.7214 4.7214 88.789 0.0 0.0 0.0 8.423597042265492 24.44717835237665 8.423597042265492 19.29174692824112 0 1.0 0.6777807052660807 0.3807196863200844 0.3494850021680094 [VP]VKT{[QG]|[NA]}VY;[VP]VKTV{[QG]|[NA]}Y;[VP]VVKT{[QG]|[NA]}Y;[VP][W{I|L}][{I|L}T]VY;[VP]VKVT{[QG]|[NA]}Y 4.7214;2.7719;2.5477;2.4272;2.3698 -;-;-;-;- 198 1 2.294 56594.1 1.0 1745 3981 5726 SUDHL4_400M_050219_1,5728 SUDHL4_400M_050219_1,5728,GQTKPVVVY True True GQTKPVVVY 29.508799 495.784869372845 3325355.75 5726.0 chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;;nc|ENSG00000119969|Q9NRZ9-5|HELLS;;nc|ENSG00000119969|Q9NRZ9-2|HELLS;;nc|ENSG00000119969|Q9NRZ9-3|HELLS;;nc|ENSG00000119969|Q9NRZ9-6|HELLS;;ENSG00000119969|ENST00000348459|HELLS;;nc|ENSG00000119969|Q9NRZ9-4|HELLS 5.431615829467773 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5729 29.523 800.0 748820.0 25 0 245810.0 + + 37504 TGKLISSY 8 172 434.74265548271865 867.4707580322373 2 434.7420837283134 MULTI CID FTMS 0 0 0 5726 213594.703125 0.9731862402473576 1 -0.0353832244873046 3 Unmodified _TLGKLSSY_ nc|ENSG00000146842|Q96SK2-4|TMEM209;ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-3|TMEM209;nc|ENSG00000146842|Q96SK2-2|TMEM209 25.399314129420983 0.5099049743284904 5 {[SA]|[TG]}K{I|L}SS{I|L}Y 8 -1 + 41.76 0.0 0.0 4.814 4.814 82.489 0.0 0.0 0.0 5.908848304060911 16.409780573583305 5.908848304060911 4.801594589017384 0 0.5 0.8239087409443188 0.8921590589602533 0.0 {[SA]|[TG]}K{I|L}SS{I|L}Y;{[SA]|[TG]}KS{I|L}S{I|L}Y;[{I|L}T][KG]SS{I|L}Y;[KG]T{I|L}SS{I|L}Y;{I|L}{I|L}{M(Oxidation (M))|F}{I|L}S{I|L}Y;[KG]TS{I|L}S{I|L}Y;{[SA]|[TG]}K{I|L}{I|L}SSY;{[VA]|[{I|L}G]}[KT]SS{I|L}Y;{[SA]|[TG]}K{[WT]|[RM]}{I|L}Y;[{I|L}P]Y{I|L}S{I|L}Y 4.814;4.2605;4.1328;3.8945;3.8931;3.341;3.3105;3.1628;2.9055;2.739 -;-;-;-;-;-;-;-;-;- 191 1 2.294 465553.2 0.9300000071525574 1746 3981 5726 SUDHL4_400M_050219_1,5729 SUDHL4_400M_050219_1,5729,TLGKLSSY False False TGKLISSY 29.522614 434.742083728313 1124387.25 5726.0 nc|ENSG00000146842|Q96SK2-4|TMEM209;;ENSG00000146842|ENST00000397622|TMEM209;;nc|ENSG00000146842|Q96SK2-3|TMEM209;;nc|ENSG00000146842|Q96SK2-2|TMEM209 5.360226313273112 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5730 29.536 800.0 74420.0 25 0 7415.3 -1 RRCFFWRFMFY 11 87 837.8980576259667 1673.7815623187332 2 837.8999511599541 MULTI CID FTMS 0 0 0 5726 81191.4375 0.6583077711959343 -8 0.295999526977539 4 Oxidation (M) _RRCFFWRFM(Oxidation (M))FY_ ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR;nc|ENSG00000001626|P13569-3|CFTR 2.9952420565917617 0.861016188266951 5 {[VA]|[{I|L}G]}{I|L}N[PS]QQ 8 -1 47.452 0.0 0.0 2.835 0.0 0.0 0.0 833.3245670396894 833.3245670396894 26.49166239860314 0.0 0.0 0.0 0 1.0 1.5228787452803376 0.3494850021680094 0.7302046884880937 {[VA]|[{I|L}G]}{I|L}N[PS]QQ 2.835 - 1523 1 2.294 47143.0 0.7099999785423279 1747 3981 5726 SUDHL4_400M_050219_1,5730 SUDHL4_400M_050219_1,5730,RRCFFWRFMFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5732 29.551 642.0 241310.0 25 0 20248.0 + 15937 ISYPSPYFGNQ 11 131 636.7969586110352 1271.5793642888702 2 636.7972900271416 MULTI CID FTMS 0 0 0 5731 194746.40625 0.3631308305512407 3 -0.0888519287109375 1 Unmodified _ISYPSPYFGNQ_ REV__ENSG00000153250|ENST00000348849|RBMS1;REV__nc|ENSG00000153250|P29558-2|RBMS1 22.65808497894818 0.560183898709508 5 {[TV]|[{I|L}S]}YPGNSD 8 -1 67.912 0.0 0.0 5.3408 0.0 0.0 0.0 435.2006306281413 435.2006306281413 45.693897340162906 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.3807196863200844 0.4247425010840047 {[TV]|[{I|L}S]}YPGNSD 5.3408 - 712 + 1 2.269 117277.8 1.0 1748 3982 5731 SUDHL4_400M_050219_1,5732 SUDHL4_400M_050219_1,5732,ISYPSPYFGNQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5733 29.555 233.0 493010.0 25 0 76471.0 + 1391 ALAPNVRL 8 103 427.2663148012602 852.5180766693204 2 427.2663146853447 MULTI CID FTMS 0 0 0 5731 181335.5 0.3141043774707141 -5 0.242715835571289 2 Unmodified _ALAPNVRL_ REV__ENSG00000023191|ENST00000354420|RNH1;REV__ENST00000525522.5_1_11:499827-504867:-|nuORF;REV__ENST00000528713.5_1_11:500482-502162:-|nuORF;REV__ENST00000531223.1_1_11:499763-502162:-|nuORF 26.34127834903884 0.4900704351052977 5 [{I|L}A]APG 5 -1 43.244 0.0 0.0 5.0725 0.0 0.0 0.0 440.2661837213501 440.2661837213501 31.461435237958906 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 [{I|L}A]APG 5.0725 - 96 + 1 2.269 92855.0 1.0 1749 3982 5731 SUDHL4_400M_050219_1,5733 SUDHL4_400M_050219_1,5733,ALAPNVRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5734 29.558 114.0 546130.0 25 0 44866.0 + -1 ISIDGSRSY 9 106 499.2753721626221 498.2680956960221 1 499.2753784060478 MULTI CID FTMS 0 0 0 5731 249398.375 0.0551472644987503 21 -0.4295501708984375 3 nc|ENSG00000163029|Q96SB8-2|SMC6;ENSG00000163029|ENST00000448223|SMC6 5 Y 1 -1 12.218 0.0 0.0 2.4522 0.0 0.0 317.1935850532471 0.0 317.1935850532471 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.4522 - 18 + 1 2.269 54310.4 1.0 1750 3982 5731 SUDHL4_400M_050219_1,5734 SUDHL4_400M_050219_1,5734, False False ISIDGSRSY 29.557724 499.275378406048 1009137.875 5731.0 nc|ENSG00000163029|Q96SB8-2|SMC6;;ENSG00000163029|ENST00000448223|SMC6 4.166367530822754 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5736 29.566 331.0 194100.0 25 0 11512.0 + -1 SEVMGEPHL 9 103 507.7325550307095 1013.450557128219 2 507.7317382693291 MULTI CID FTMS 0 0 0 5735 95844.921875 0.6111118583042799 1 -0.0376853942871093 1 Oxidation (M) _SEVM(Oxidation (M))GEPHL_ ENSG00000132963|ENST00000380842|POMP 34.10243960390752 0.1078313939113124 5 {[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}{[DA]|[EG]}PH{I|L} 9 -1 + 29.926 0.0 0.0 2.9529 2.9529 83.03 0.0 0.0 0.0 14.441385575035325 5.272435506827872 5.272435506827872 10.0 0 0.9247425010840048 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}{[DA]|[EG]}PH{I|L};{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}P{[DA]|[EG]}H{I|L};{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}{[DA]|[EG]}[H{I|L}]P;{[ES]|[DT]|[{I|L}C]}V[{M(Oxidation (M))|F}E]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}V[HV][MT][DP];{[ES]|[DT]|[{I|L}C]}YQQ{[NV]|[RG]}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}Y[YG][WP]{I|L};{[ES]|[DT]|[{I|L}C]}Y[YG][W{I|L}]P;{[ES]|[DT]|[{I|L}C]}YQ[Y{I|L}][DP];{[ES]|[DT]|[{I|L}C]}Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[RE]|[WV]}P 2.9529;1.9661;1.6595;1.425;1.3001;0.92472;0.8122;0.60116;0.46017;0.4274 +;-;-;-;-;-;-;-;-;- + 174 + 1 2.269 57468.1 1.0 1751 3983 5735 SUDHL4_400M_050219_1,5736 SUDHL4_400M_050219_1,5736,SEVMGEPHL False False SEVMGEPHL 29.565757 507.731738269329 1475946.625 5735.0 ENSG00000132963|ENST00000380842|POMP 5.049670219421387 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5737 29.58 800.0 122560.0 25 0 6359.8 -1 ELELQGRMEF 10 144 634.3034584979658 1266.5923640627316 2 634.3027831912041 MULTI CID FTMS 0 0 0 5735 140292.34375 0.4337174812484434 2 -0.0675468444824218 2 Oxidation (M) _ELELQGRM(Oxidation (M))EF_ ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40 38.17557092003332 0.1768326257063233 5 [Q{I|L}]KQEQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F} 10 -1 + 72.929 0.0 0.0 5.7579 5.7579 88.578 0.0 0.0 0.0 3.0444970792913466 50.533504132662586 3.0444970792913466 9.164539485499256 0 0.805462187404089 0.0 0.7614393726401688 1.5356668758921828 [Q{I|L}]KQEQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Q{I|L}]KQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[Q{I|L}]K[AG]E[AG]A{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[RV]EQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[DP]K{[SA]|[TG]}KQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}QQKQA{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Q{I|L}]K[AG]A{M(Oxidation (M))|F}E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[RV]E[AG]A{M(Oxidation (M))|F}E{M(Oxidation (M))|F} 5.7579;5.0344;5.0344;4.3399;4.3136;4.1385;3.8814;3.7222;3.6163;3.4149 -;-;-;-;-;-;-;-;-;- 996 1 2.269 79447.1 0.8700000047683716 1752 3983 5735 SUDHL4_400M_050219_1,5737 SUDHL4_400M_050219_1,5737,ELELQGRMEF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5738 29.593 800.0 294010.0 25 0 45990.0 + 43570 YAARARLL 8 174 467.2856754961242 932.5567980590484 2 467.2862426638603 MULTI CID FTMS 0 0 0 5735 133090.578125 0.8082915916407486 -4 0.1658592224121093 3 Unmodified _YAARARLL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 15.768221252438446 0.6779680726941459 5 {I|L}{I|L} 2 6 24.737 0.0 0.0 2.6526 0.0 0.0 0.0 703.3659248632885 703.3659248632885 3.309932190414248 0.0 0.0 0.0 0 0.0 0.3767507096020995 0.0 0.0 + {I|L}{I|L} 2.6526 + + 235 + 1 2.269 181225.8 0.7200000286102295 1753 3983 5735 SUDHL4_400M_050219_1,5738 SUDHL4_400M_050219_1,5738,YAARARLL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5739 29.595 89.0 750880.0 25 0 290340.0 42093 VRECLKLD 8 84 488.2681166470294 0 488.2678405642509 PEAK CID FTMS 0 0 0 5735 602931.75 1.0 0 0.0 4 Unmodified _VRECLKLD_ ENSG00000102580|ENST00000602402|DNAJC3 7.910154910731844 0.5650536163073903 5 E 1 7 4.6041 0.0 0.0 0.47245 0.0 0.0 297.1413835852713 545.3245943658811 842.4659779511524 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.47245 + + 31 + 1 2.269 56282.2 1.0 1754 3983 5735 SUDHL4_400M_050219_1,5739 SUDHL4_400M_050219_1,5739,VRECLKLD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5741 29.6 37.0 1440300.0 25 0 262350.0 + 1322 AIVVGGKG 8 66 350.721217116671 0 350.7212402224541 PEAK CID FTMS 0 0 0 5740 1370012.25 0.3578275646996077 3 -0.0982036590576171 1 Unmodified _AIVVGGKG_ REV__ENSG00000188011|ENST00000343216|RTP5;REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF 9.347437153973935 0.5488964601725408 5 V{I|L}{M(Oxidation (M))|F}A 4 -1 17.735 0.0 0.0 2.5356 0.0 0.0 184.12014328191088 82.06701837711171 266.1871616590226 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{I|L}{M(Oxidation (M))|F}A 2.5356 - 38 + 1 2.269 47930.3 1.0 1755 3984 5740 SUDHL4_400M_050219_1,5741 SUDHL4_400M_050219_1,5741,AIVVGGKG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5742 29.614 800.0 175320.0 25 0 18954.0 -1 0 60 996.30378727587 4976.482554046351 5 996.703173816204 MULTI CID FTMS 0 0 0 5740 109701.75 0.3814785055548443 -2 0.058990478515625 2 5 AECT 4 -1 18.928 0.0 0.0 0.38035 0.0 0.0 4161.13308002467 408.179240662711 4569.312320687381 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AECT 0.38035 - 27 + 1 2.269 97184.8 0.6499999761581421 1756 3984 5740 SUDHL4_400M_050219_1,5742 SUDHL4_400M_050219_1,5742, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5743 29.619 314.0 447010.0 25 0 40563.0 + 12251 GQYPTQPTY 9 134 527.7456635920757 0 527.7463256716728 PEAK CID FTMS 0 0 0 5740 238140.921875 0.4116648677790598 -1 0.0376853942871093 3 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 69.10491478415734 0.015593057067598 5 QPT 3 6 20.267 0.0 0.0 1.9238 0.0 0.0 546.2385634303042 178.0515535943969 724.2901170247011 0.0 0.0 0.0 0.0 0 0.6203715150305281 0.0 1.0356668758921828 0.0 + QPT 1.9238 + + 406 + 1 2.269 110106.7 1.0 1757 3984 5740 SUDHL4_400M_050219_1,5743 SUDHL4_400M_050219_1,5743,GQYPTQPTY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5744 29.625 320.0 187410.0 25 0 9775.5 + + 32939 SIRPDNMSEY 10 107 606.2718230349933 1210.5290931367863 2 606.2697021365166 MULTI CID FTMS 0 0 0 5740 182256.734375 0.9215374316901253 2 -0.0554084777832031 4 Unmodified _SELIDDLDEY_ ENST00000481281.5_1_1:32757770-32793222:+|nuORF;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2;ENSG00000196591|ENST00000519065|HDAC2;ENST00000521233.1_1_6:114279792-114292096:-|nuORF;ENSG00000116478|ENST00000373548|HDAC1 19.256988751693697 0.5244284437930726 5 NMSEY 5 -1 43.756 0.0 0.0 3.6146 0.0 0.0 568.296837167339 0.0 568.296837167339 0.0 32.78659694992122 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 NMSEY 3.6146 - 93 1 2.269 47533.5 1.0 1758 3984 5740 SUDHL4_400M_050219_1,5744 SUDHL4_400M_050219_1,5744,SELIDDLDEY False False SIRPDNMSEY 29.625119 606.269702136517 1171741.75 5740.0 ENST00000481281.5_1_1:32757770-32793222:+|nuORF;;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENSG00000196591|ENST00000519065|HDAC2;;ENST00000521233.1_1_6:114279792-114292096:-|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 7.368979930877685 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5746 29.642 800.0 89029.0 25 0 11694.0 + -1 TICSKYFCCFY 11 98 717.8000194818194 1433.5854860304387 2 717.7996093630791 MULTI CID FTMS 0 0 0 5745 45227.21875 0.3623894873643461 2 -0.0683422088623046 1 Carbamidomethyl (C) _TIC(Carbamidomethyl (C))SKYFCCFY_ REV__ENST00000393085.3_1_7:135613509-135613572:-|nuORF 8.745405648335112 0.8338865417133445 5 DEAQQDA{M(Oxidation (M))|F}Y 9 -1 61.164 0.0 0.0 4.2665 0.0 0.0 348.15486342597814 0.0 348.15486342597814 0.0 45.67918449261214 0.0 0.0 0 0.8182503180159344 0.0 0.3494850021680094 0.4247425010840047 DEAQQDA{M(Oxidation (M))|F}Y 4.2665 - 534 1 2.255 53934.3 0.6399999856948853 1759 3985 5745 SUDHL4_400M_050219_1,5746 SUDHL4_400M_050219_1,5746,TICSKYFCCFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5747 29.649 353.0 229960.0 25 0 25211.0 + 26459 NTIDPSHPM 9 132 506.23203645867136 1010.4495199841429 2 506.2322265505791 MULTI CID FTMS 0 0 0 5745 147071.625 1.0 0 0.0 2 Unmodified _NTIDPSHPM_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 15.847184025352805 0.4077185912009129 5 {[QS]|[NT]}[KG]M 5 6 17.434 0.0 0.0 1.7253 0.0 0.0 0.0 476.180757126974 476.180757126974 4.669577525961266 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 {[QS]|[NT]}[KG]M 1.7253 - 316 1 2.255 64899.8 1.0 1760 3985 5745 SUDHL4_400M_050219_1,5747 SUDHL4_400M_050219_1,5747,NTIDPSHPM False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5748 29.651 83.0 544980.0 25 0 76798.0 37984 TNKGRYKV 8 86 483.2806474654024 0 483.2808715701103 PEAK CID FTMS 0 0 0 5745 440733.71875 0.2678530541542003 6 -0.1998634338378906 3 Unmodified _TNKGRYKV_ ENSG00000145833|ENST00000452510|DDX46;ENST00000506332.1_1_5:134162605-134164393:+|nuORF;nc|ENSG00000145833|Q7L014|DDX46 5.230669730166228 0.5807325378471833 5 S 1 8 6.9897 0.0 0.0 0.72466 0.0 0.0 330.2000145579547 544.2871798150999 874.4871943730545 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.72466 - 9 + 1 2.255 42847.0 1.0 1761 3985 5745 SUDHL4_400M_050219_1,5748 SUDHL4_400M_050219_1,5748,TNKGRYKV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5750 29.655 71.0 925120.0 25 0 215840.0 + 3128 AVPPALRGP 9 53 439.2665232806816 876.5184936281631 2 439.2663757205009 MULTI CID FTMS 0 0 0 5749 789331.0625 0.1199752280587197 36 -0.5982341766357422 1 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 5 {[VA]|[{I|L}G]}PPA 5 -1 43.601 0.0 0.0 4.9743 0.0 0.0 0.0 438.2482699029906 438.2482699029906 31.761116689778586 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.9743 + + 24 + 1 2.255 57556.2 1.0 1762 3986 5749 SUDHL4_400M_050219_1,5750 SUDHL4_400M_050219_1,5750,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5751 29.658 142.0 324980.0 25 0 21992.0 + 27593 PLDPAEFTV 9 88 494.7512123663481 0 494.7519409060478 PEAK CID FTMS 0 0 0 5749 68905.4609375 0.2366280799294808 1 -0.042795181274414 2 Unmodified _PLDPAEFTV_ REV__ENSG00000177169|ENST00000321867|ULK1;REV__ENST00000540647.5_1_12:132402872-132405903:+|nuORF 16.942295170755138 0.2326366549411506 5 PV 2 -1 8.4434 0.0 0.0 0.85503 0.0 0.0 297.11178644969 491.2158602350219 788.3276466847119 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 PV 0.85503 - 91 + 1 2.255 41066.4 1.0 1763 3986 5749 SUDHL4_400M_050219_1,5751 SUDHL4_400M_050219_1,5751,PLDPAEFTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5752 29.663 270.0 400310.0 25 0 17011.0 27882 PLSKNLLAQI 10 141 366.22748840467983 0 366.2278320193291 PEAK CID FTMS 0 0 0 5749 218021.0625 0.8503241364760273 -2 0.0554084777832031 3 Unmodified _PLSKNLLAQI_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 3.5870582119611467 0.3961065659209837 5 P 1 9 8.0989 0.0 0.0 1.1088 0.0 0.0 126.1140821786972 504.2504366510376 630.3645188297347 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + P 1.1088 + + 37 + 1 2.255 88648.6 1.0 1764 3986 5749 SUDHL4_400M_050219_1,5752 SUDHL4_400M_050219_1,5752,PLSKNLLAQI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5753 29.672 539.0 235510.0 25 0 37624.0 + -1 MLERVVSLK 9 128 545.8176938463371 1089.620834759474 2 545.8185302615166 MULTI CID FTMS 0 0 0 5749 156109.359375 1.0 0 0.0 4 Oxidation (M) _M(Oxidation (M))LERVVSLK_ REV__ENSG00000111300|ENST00000261745|NAA25;REV__ENST00000549711.5_1_12:112487373-112518932:-|nuORF;REV__ENST00000552527.5_1_12:112478245-112546577:-|nuORF;REV__nc|ENSG00000111300|Q14CX7-2|NAA25 14.838274106304384 0.4350285940865338 5 T{M(Oxidation (M))|F}K 3 -1 20.698 0.0 0.0 1.8996 0.0 0.0 695.4307235307616 0.0 695.4307235307616 0.0 8.708799596390058 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.1643943297944484 T{M(Oxidation (M))|F}K 1.8996 - 269 + 1 2.255 100576.9 1.0 1765 3986 5749 SUDHL4_400M_050219_1,5753 SUDHL4_400M_050219_1,5753,MLERVVSLK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5754 29.686 800.0 189120.0 25 0 13284.0 + 1533 ALKDLAKQY 9 173 525.3028823568244 1048.5912117804487 2 525.3035766482353 MULTI CID FTMS 0 0 0 5749 129838.7265625 1.0 0 0.0 5 Unmodified _ALKDLAKQY_ ENSG00000013374|ENST00000568733|NUB1;nc|ENSG00000013374|Q9Y5A7-2|NUB1 100.7086487251713 0.0106210784076588 5 A{I|L}KD{I|L}AKQY 9 0 + 96.462 0.0 0.0 9.1992 9.1992 97.202 0.0 0.0 0.0 68.9565530266524 13.46787486224656 13.46787486224656 14.208187539523747 0 2.5471062485323515 1.6989700043360187 0.0 1.25 + + A{I|L}KD{I|L}AKQY;A{I|L}KD{I|L}AK[AG]Y;A{I|L}KD{I|L}AK[SG]{M(Oxidation (M))|F};[{I|L}A]KD{I|L}AKQY;[{I|L}A]DK{I|L}AKQY;A{I|L}K[KT][TP]QY;[{I|L}A]KD{I|L}AK[AG]Y;[{I|L}A][TA]A{I|L}AKQY;[{I|L}A]DK{I|L}AK[AG]Y;[VG]S{I|L}A{I|L}AKQY 9.1992;7.8442;7.0059;6.7132;6.5723;6.2085;5.8351;5.6941;5.6941;5.6386 +;-;-;+;-;-;-;-;-;- + 3233 + 1 2.255 117042.6 0.6200000047683716 1766 3986 5749 SUDHL4_400M_050219_1,5754 SUDHL4_400M_050219_1,5754,ALKDLAKQY True True ALKDLAKQY 29.686242 525.303576648235 788310.4375 5749.0 nc|ENSG00000013374|Q9Y5A7-2|NUB1;;ENSG00000013374|ENST00000568733|NUB1 6.164640267690023 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5755 29.693 403.0 137720.0 25 0 22733.0 + 30588 REVEIQSHL 9 85 555.7978314881387 1109.5811100430774 2 555.7985107302666 MULTI CID FTMS 0 0 0 5749 102640.1796875 1.0 0 0.0 6 Unmodified _REVEIQSHL_ chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;ENSG00000087586|ENST00000395915|AURKA 19.361941925380144 0.3125782356748823 5 SAS{I|L}QSH{I|L} 8 4 52.639 0.0 0.0 4.7441 0.0 0.0 268.1540699689469 0.0 268.1540699689469 0.0 39.54033167468005 0.0 0.0 0 0.1505149978319906 0.0 0.4247425010840047 0.0 SAS{I|L}QSH{I|L} 4.7441 - 137 1 2.255 48645.4 1.0 1767 3986 5749 SUDHL4_400M_050219_1,5755 SUDHL4_400M_050219_1,5755,REVEIQSHL False True REVEIQSHL 29.69345 555.798510730267 361050.46875 5749.0 chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;;ENSG00000087586|ENST00000395915|AURKA 5.146667003631592 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5757 29.71 800.0 79244.0 25 0 18255.0 -1 0 39 1163.4641565415436 3487.370640224831 3 1163.797534167767 MULTI CID FTMS 0 0 0 5756 74818.640625 0.1687924854733345 5 -0.1747970581054687 1 5 E 1 -1 6.9897 0.0 0.0 0.20043 0.0 0.0 2831.141873835364 524.1629732721311 3355.304847107496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20043 - 2 + 1 2.255 58883.4 0.6600000262260437 1768 3987 5756 SUDHL4_400M_050219_1,5757 SUDHL4_400M_050219_1,5757, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5758 29.711 57.0 939420.0 25 0 77347.0 26446 NTEKIYGV 8 77 462.2464685933747 922.4783842535494 2 462.2470580935478 MULTI CID FTMS 0 0 0 5756 639372.875 0.3530670028142605 -4 0.1358890533447265 2 Unmodified _NTEKIYGV_ ENSG00000101974|ENST00000682941|ATP11C;nc|ENSG00000101974|Q8NB49-2|ATP11C;nc|ENSG00000101974|Q8NB49-3|ATP11C;nc|ENSG00000101974|Q8NB49-4|ATP11C;nc|ENSG00000101974|Q8NB49|ATP11C 28.486842064014134 0.4448922141344407 5 TYR 3 6 34.715 0.0 0.0 3.7632 0.0 0.0 484.2641773908219 0.0 484.2641773908219 0.0 20.735272328612417 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 TYR 3.7632 - 48 1 2.255 47667.5 1.0 1769 3987 5756 SUDHL4_400M_050219_1,5758 SUDHL4_400M_050219_1,5758,NTEKIYGV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5759 29.725 800.0 162520.0 25 0 8222.4 + -1 MHCSSECFPL 10 150 585.2247203742871 1168.4348878153742 2 585.2248412966728 MULTI CID FTMS 0 0 0 5756 182294.578125 1.0 0 0.0 3 Oxidation (M) _M(Oxidation (M))HCSSECFPL_ REV__ENSG00000178394|ENST00000323865|HTR1A 10.073929032068715 0.6785112666868882 5 [KQ]MGSYSCYC 10 -1 + 44.11 0.0 0.0 3.7752 3.7752 75.422 0.0 0.0 0.0 1.348143703204613 7.199915470362015 1.348143703204613 1.348143703204613 0 1.0682503180159344 0.0 1.1307196863200843 0.3807196863200844 [KQ]MGSYSCYC;[AG]KMGSYSCYC;[MT][W{I|L}]YSCYC;[KQ]Q{M(Oxidation (M))|F}YSCYC;[AG]KQ{M(Oxidation (M))|F}YSCYC;[TP][{M(Oxidation (M))|F}V]SYSCYC;[{I|L}T][WM]YSCYC;{[YC]|[HE]}[TA]KQSCYC;[KQ][AG]{M(Oxidation (M))|F}YSCYC;{[VA]|[{I|L}G]}HHSYSCYC 3.7752;3.6598;3.1139;3.0834;2.9643;2.5949;2.5299;2.3631;2.2953;2.1939 -;-;-;-;-;-;-;-;-;- 847 1 2.255 100115.6 0.8199999928474426 1770 3987 5756 SUDHL4_400M_050219_1,5759 SUDHL4_400M_050219_1,5759,MHCSSECFPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5761 29.729 23.0 1686900.0 25 0 441310.0 + 37920 TLYEHNNEL 9 58 566.7673089625091 1131.520064991818 2 566.7672607302666 MULTI CID FTMS 0 0 0 5760 2265853.0 0.4880000939019614 5 -0.1682338714599609 1 Unmodified _TLYEHNNEL_ ENSG00000094914|ENST00000209873|AAAS;ENST00000548880.1_1_12:53709415-53715282:-|nuORF;nc|ENSG00000094914|Q9NRG9-2|AAAS 24.020572477871973 0.2255576514309169 5 {[YC]|[HE]}YNNE{I|L}T{I|L} 9 6 + 30.555 0.0 0.0 2.7004 2.7004 82.079 0.0 0.0 0.0 1.63016489275471 9.920299789533406 1.63016489275471 9.208187539523752 0 0.218765315847925 0.0 0.0 0.3807196863200844 {[YC]|[HE]}YNNE{I|L}T{I|L};{[YC]|[HE]}YGGNE{I|L}T{I|L};{[YC]|[HE]}YNGGE{I|L}T{I|L};{[YC]|[HE]}YNNT{I|L}{[QN]|[E{I|L}]|[KN]};{[YC]|[HE]}Y[VP][YE][VP];[HN][YE]NE{I|L}T{I|L};{[YC]|[HE]}YGGNT{I|L}{[QN]|[E{I|L}]|[KN]};{[YC]|[HE]}YNGGT{I|L}{[QN]|[E{I|L}]|[KN]};{[YC]|[HE]}YGGGGE{I|L}T{I|L};[HN][YE]GGE{I|L}T{I|L} 2.7004;1.8866;1.8866;1.7941;1.2096;1.1989;0.98031;0.98031;0.74018;0.38508 -;-;-;-;-;-;-;-;-;- 138 1 2.246 35156.3 1.0 1771 3988 5760 SUDHL4_400M_050219_1,5761 SUDHL4_400M_050219_1,5761,TLYEHNNEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5762 29.732 115.0 429180.0 25 0 54582.0 33415 SHFKHTEL 8 87 499.75628915473175 997.4980253762636 2 499.7559997439384 MULTI CID FTMS 0 0 0 5760 289637.4375 0.315395727735202 -6 0.188568115234375 2 Unmodified _SHFKHTEL_ ENSG00000130856|ENST00000320610|ZNF236;nc|ENSG00000130856|Q9UL36-2|ZNF236;nc|ENSG00000130856|Q9UL36|ZNF236 21.74664581756881 0.5868176546531598 5 QPAAQ{I|L} 6 7 43.51 0.0 0.0 4.3619 0.0 0.0 371.16023451972814 0.0 371.16023451972814 0.0 31.29136766712909 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 QPAAQ{I|L} 4.3619 - 180 1 2.246 43078.4 1.0 1772 3988 5760 SUDHL4_400M_050219_1,5762 SUDHL4_400M_050219_1,5762,SHFKHTEL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5763 29.735 172.0 391600.0 25 0 19486.0 23972 LVSSANGVFRE 11 126 589.8129367283087 1177.6113205234174 2 589.8126098513603 MULTI CID FTMS 0 0 0 5760 175041.859375 0.3509554262245994 -3 0.0997161865234375 3 Unmodified _LVSSANGVFRE_ ENST00000531423.1_1_8:145696018-145698106:+|nuORF 15.248480904072842 0.7179608125786238 5 {I|L}{M(Oxidation (M))|F}YNK[PG]K[DP] 10 9 + 46.688 0.0 0.0 3.9646 3.9646 74.098 0.0 0.0 0.0 25.79689690656103 5.791812460476251 5.791812460476251 0.0443219174010778 0 0.0 0.0 0.3054621874040891 0.4247425010840047 {I|L}{M(Oxidation (M))|F}YNK[PG]K[DP];{I|L}{M(Oxidation (M))|F}YN{I|L}{I|L}A{I|L}[DP];{I|L}{M(Oxidation (M))|F}YGGK[PG]K[DP];{I|L}{M(Oxidation (M))|F}YN{I|L}{I|L}DPA{I|L};{I|L}{M(Oxidation (M))|F}YGG{I|L}{I|L}A{I|L}[DP];{I|L}{M(Oxidation (M))|F}YNK[PG][DP]K;{I|L}{M(Oxidation (M))|F}YN{I|L}{I|L}A[DP]{I|L};{I|L}{M(Oxidation (M))|F}YN{I|L}{I|L}D{I|L}[PA];{I|L}{M(Oxidation (M))|F}YNK[PG][TA][PA];{I|L}{M(Oxidation (M))|F}YNK[PG][VG][PS] 3.9646;3.9608;3.1864;2.942;2.8219;2.7775;2.6713;2.4509;2.3372;2.302 -;-;-;-;-;-;-;-;-;- 632 + 1 2.246 55948.6 1.0 1773 3988 5760 SUDHL4_400M_050219_1,5763 SUDHL4_400M_050219_1,5763,LVSSANGVFRE False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5764 29.749 800.0 176920.0 25 0 8922.1 9010 FCFWLLSNVL 10 135 621.3220996759923 1240.6296464187844 2 621.3228637576103 MULTI CID FTMS 0 0 0 5760 153669.65625 1.0 0 0.0 4 Unmodified _FCFWLLSNVL_ ENSG00000140274|ENST00000323030|DUOXA2 18.1463463914782 0.5430639438673815 5 DPSQSANV{I|L} 9 7 72.529 0.0 0.0 5.8461 0.0 0.0 311.1849842755875 0.0 311.1849842755875 0.0 46.49828979850449 0.0 0.0 0 0.3885989491816006 0.0 1.6237125054200234 0.8494850021680094 DPSQSANV{I|L} 5.8461 - 782 1 2.246 107859.2 0.7300000190734863 1774 3988 5760 SUDHL4_400M_050219_1,5764 SUDHL4_400M_050219_1,5764,FCFWLLSNVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5766 29.754 121.0 384570.0 25 0 46040.0 37537 TLHPVWSQQ 9 74 548.2829799657695 1094.551406998339 2 548.2829467654228 MULTI CID FTMS 0 0 0 5765 298111.96875 0.1981451926877987 18 -0.2830333709716797 1 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 16.565877749689598 0.3882643987948875 5 EHPPEH[HK] 8 7 29.614 0.0 0.0 2.7056 0.0 0.0 85.08977706123203 0.0 85.08977706123203 0.0 16.439710319540524 0.0 0.0 0 1.742992819099939 0.0 0.3494850021680094 0.0 EHPPEH[HK] 2.7056 - 224 1 2.246 40506.2 1.0 1775 3989 5765 SUDHL4_400M_050219_1,5766 SUDHL4_400M_050219_1,5766,TLHPVWSQQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5767 29.759 266.0 253410.0 25 0 23510.0 + 35906 SVNELIYKR 9 93 561.3198908941145 1120.6252288550288 2 561.3204833865166 MULTI CID FTMS 0 0 0 5765 170615.765625 0.7545749098140888 -1 0.0241336822509765 2 Unmodified _SVNELIYKR_ ENSG00000147604|ENST00000352983|RPL7;ENST00000444633.1_1_10:100807788-100807923:+|nuORF;ENST00000461513.1_1_17:49579856-49580498:-|nuORF 45.739877483867886 0.0497104363764649 5 [VS]NE{I|L}{I|L}[YK]R 9 0 + 77.405 0.0 0.0 6.9073 6.9073 88.525 0.0 0.0 0.0 20.188324713653067 5.051499783199063 5.051499783199063 5.051499783199063 0 1.5451140161145327 2.0 0.0 0.7059771852360797 + + [VS]NE{I|L}{I|L}[YK]R;[VS]NE{I|L}{I|L}[RK]Y;[VS]GGE{I|L}{I|L}[YK]R;[VS]GGE{I|L}{I|L}[RK]Y 6.9073;6.4566;6.0856;5.6349 +;-;-;- + 147 + 1 2.246 58351.9 1.0 1776 3989 5765 SUDHL4_400M_050219_1,5767 SUDHL4_400M_050219_1,5767,SVNELIYKR True True SVNELIYKR 29.758612 561.320483386517 1007826.8125 5765.0 ENSG00000147604|ENST00000352983|RPL7;;ENST00000444633.1_1_10:100807788-100807923:+|nuORF;;ENST00000461513.1_1_17:49579856-49580498:-|nuORF 5.618866602579753 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5768 29.768 556.0 270100.0 25 0 14261.0 + 2251 AQFETKKLY 9 162 564.308259567448 1126.601966201696 2 564.3066284060478 MULTI CID FTMS 0 0 0 5765 144585.0 0.1853167389714046 -4 0.123849868774414 3 Unmodified _AQFETKKLY_ ENSG00000183291|ENST00000331835|SELENOF;ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF 62.86856922530385 0.024493861581232 5 AQ{M(Oxidation (M))|F}ETKK{I|L}Y 9 0 + 86.136 0.0 0.0 7.6456 7.6456 96.137 0.0 0.0 0.0 53.34603606661185 13.46787486224656 13.46787486224656 17.1669877129645 0 1.7302046884880935 0.7958800173440752 0.6307196863200843 0.8807196863200843 + + AQ{M(Oxidation (M))|F}ETKK{I|L}Y;A[AG]{M(Oxidation (M))|F}ETKK{I|L}Y;[KT]EK{M(Oxidation (M))|F}[QA]{I|L}Y;[KT]KE{M(Oxidation (M))|F}[QA]{I|L}Y;[KT]EK{M(Oxidation (M))|F}{I|L}[QA]Y;[KT]KE{M(Oxidation (M))|F}{I|L}[QA]Y;[K{I|L}]KTE{M(Oxidation (M))|F}[QA]Y;KKTE{M(Oxidation (M))|F}[QA]{I|L}Y;KKTE{M(Oxidation (M))|F}{I|L}[QA]Y;[KT]K{I|L}E{M(Oxidation (M))|F}[QA]Y 7.6456;6.1219;3.2752;3.2006;3.1694;3.0947;2.898;2.8939;2.788;2.7578 +;-;-;-;-;-;-;-;-;- + 1417 + 1 2.246 115356.1 1.0 1777 3989 5765 SUDHL4_400M_050219_1,5768 SUDHL4_400M_050219_1,5768,AQFETKKLY True True AQFETKKLY 29.768379 564.306628406048 7455212.0 5765.0 ENST00000331835.9_2_1:87346375-87379803:-|nuORF;;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;;nc|ENSG00000183291|O60613-2|SELENOF;;ENSG00000183291|ENST00000331835|SELENOF 4.903367042541504 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5769 29.774 299.0 230820.0 25 0 33226.0 + 30864 RIMESGSEL 9 96 511.2520649609248 1020.4895769886496 2 511.2517272830009 MULTI CID FTMS 0 0 0 5765 91979.21875 0.5330696481361982 -2 0.0555076599121093 4 Unmodified _RIMESGSEL_ ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9;nc|ENSG00000144580|Q92600-3|CNOT9 29.84058131909904 0.1515068451768857 5 [R{I|L}]MESGSE{I|L} 9 0 + 51.092 0.0 0.0 5.0067 5.0067 82.172 0.0 0.0 0.0 3.65279269351241 35.607887415777526 3.65279269351241 3.979400086720375 0 0.1505149978319906 0.0 0.8494850021680094 0.0 + + [R{I|L}]MESGSE{I|L};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}SGSE{I|L};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}{[QC]|[C(Carbamidomethyl (C))A]}E{I|L};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}S{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};{[ES]|[DT]|[{I|L}C]}[VP]V{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}{I|L} 5.0067;4.6167;2.4395;2.0233;1.7624 +;-;-;-;- + 127 1 2.246 58493.5 1.0 1778 3989 5765 SUDHL4_400M_050219_1,5769 SUDHL4_400M_050219_1,5769,RIMESGSEL False True RIMESGSEL 29.773862 511.251727283001 936138.0625 5765.0 ENSG00000144580|ENST00000273064|CNOT9;;nc|ENSG00000144580|Q92600-2|CNOT9;;nc|ENSG00000144580|Q92600-3|CNOT9 4.754402955373128 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5770 29.776 122.0 519200.0 25 0 67585.0 + 31137 RLNEKNYEL 9 93 393.5436078067581 1177.6089940204745 3 393.5433227419853 MULTI CID FTMS 0 0 0 5765 241912.671875 0.9143503483498489 -2 0.0555076599121093 5 Unmodified _RLNEKNYEL_ ENSG00000047249|ENST00000359530|ATP6V1H;ENST00000521707.1_1_8:54669113-54684583:-|nuORF;nc|ENSG00000047249|Q9UI12-2|ATP6V1H 8.745405648335112 0.6093864874670651 5 {I|L} 1 8 15.485 0.0 0.0 1.3149 0.0 0.0 1046.513884012465 0.0 1046.513884012465 0.0 -6.73393743112328 -6.73393743112328 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3149 + + 39 + 1 2.246 55011.0 1.0 1779 3989 5765 SUDHL4_400M_050219_1,5770 SUDHL4_400M_050219_1,5770,RLNEKNYEL False True RLNEKNYEL 29.776376 393.543322741985 1463717.375 5765.0 ENSG00000047249|ENST00000359530|ATP6V1H;;ENST00000521707.1_1_8:54669113-54684583:-|nuORF;;nc|ENSG00000047249|Q9UI12-2|ATP6V1H 4.01021941502889 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5772 29.782 192.0 225980.0 25 0 13950.0 + 2201 AQAPPTAQL 9 86 448.7457530056865 895.476953078173 2 448.7458373904228 MULTI CID FTMS 0 0 0 5771 147909.328125 0.3329158197700333 7 -0.1611309051513672 1 Unmodified _AQAPPTAQL_ ENSG00000118513|ENST00000341911|MYB;nc|ENSG00000118513|P10242-10|MYB;nc|ENSG00000118513|P10242-11|MYB;nc|ENSG00000118513|P10242-12|MYB;nc|ENSG00000118513|P10242-2|MYB;nc|ENSG00000118513|P10242-3|MYB;nc|ENSG00000118513|P10242-5|MYB;nc|ENSG00000118513|P10242-6|MYB;nc|ENSG00000118513|P10242-7|MYB;nc|ENSG00000118513|P10242-8|MYB;nc|ENSG00000118513|P10242-9|MYB;nc|ENSG00000118513|P10242|MYB 30.63653989081413 0.1413794767160703 5 [AG]AA 4 6 18.895 0.0 0.0 2.11 0.0 0.0 0.0 622.320922154598 622.320922154598 0.9361014649551792 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 [AG]AA 2.11 - 78 1 2.246 40522.0 1.0 1780 3990 5771 SUDHL4_400M_050219_1,5772 SUDHL4_400M_050219_1,5772,AQAPPTAQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5773 29.791 459.0 98527.0 25 0 5024.7 + -1 ASGPGLSSY 9 84 837.8980576259667 1673.7815623187332 2 837.9001953005791 MULTI CID FTMS 0 0 0 5771 51235.0 0.4154181733415386 1 -0.0484809875488281 2 Oxidation (M) _RRCFFWRFM(Oxidation (M))FY_ ENST00000481470.5_1_3:58118395-58154450:+|nuORF;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-2|FLNB;ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-9|FLNB;nc|ENSG00000136068|O75369-8|FLNB 1.3295316138638542 0.8688751186870782 5 {[QV]|[N{I|L}]|[RA]|[KV]}PSASSY 8 -1 43.925 0.0 0.0 2.6243 0.0 0.0 0.0 851.3813907701582 851.3813907701582 14.283895199066556 0.0 0.0 0.0 0 0.0 0.958607314841775 2.2302046884880937 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}PSASSY 2.6243 - 1746 1 2.246 37677.2 1.0 1781 3990 5771 SUDHL4_400M_050219_1,5773 SUDHL4_400M_050219_1,5773,RRCFFWRFMFY False False ASGPGLSSY 29.790539 837.900195300579 1254255.375 5771.0 ENST00000481470.5_1_3:58118395-58154450:+|nuORF;;nc|ENSG00000136068|O75369-5|FLNB;;nc|ENSG00000136068|O75369-3|FLNB;;nc|ENSG00000136068|O75369-4|FLNB;;nc|ENSG00000136068|O75369-7|FLNB;;nc|ENSG00000136068|O75369-2|FLNB;;ENSG00000136068|ENST00000295956|FLNB;;nc|ENSG00000136068|O75369-6|FLNB;;nc|ENSG00000136068|O75369-9|FLNB;;nc|ENSG00000136068|O75369-8|FLNB 2.805724223454793 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5774 29.792 77.0 1093400.0 25 0 357580.0 + 2252 AQFETKKLY 9 88 376.54107261021466 1126.601388430844 3 376.5410644412041 MULTI CID FTMS 0 0 0 5771 238529.8125 0.2775070071577825 -3 0.0830402374267578 3 Unmodified _AQFETKKLY_ ENSG00000183291|ENST00000331835|SELENOF;ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF 8.97624648632007 0.6013279508813512 5 Y 1 8 16.99 0.0 0.0 1.508 0.0 0.0 945.527060893538 0.0 945.527060893538 0.0 3.1651564221917976 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.508 + + 87 + 1 2.246 70984.8 1.0 1782 3990 5771 SUDHL4_400M_050219_1,5774 SUDHL4_400M_050219_1,5774,AQFETKKLY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5775 29.796 183.0 407640.0 25 0 78609.0 28359 PSFAVVGP 8 92 387.2122624026648 772.4099718721295 2 387.2120239138603 MULTI CID FTMS 0 0 0 5771 176629.5 1.0 0 0.0 4 Unmodified _PSFAVVGP_ ENSG00000099204|ENST00000533213|ABLIM1;nc|ENSG00000099204|O14639-2|ABLIM1;nc|ENSG00000099204|O14639-3|ABLIM1;nc|ENSG00000099204|O14639-4|ABLIM1;nc|ENSG00000099204|O14639-5|ABLIM1;nc|ENSG00000099204|O14639-6|ABLIM1 5.760428011301431 0.7893668129297577 5 G 1 7 3.0989 0.0 0.0 0.4012 0.0 0.0 630.2988553943936 82.06697260074452 712.3658279951381 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 0.4012 + + 19 + 1 2.246 64658.7 1.0 1783 3990 5771 SUDHL4_400M_050219_1,5775 SUDHL4_400M_050219_1,5775,PSFAVVGP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5776 29.805 507.0 171410.0 25 0 52357.0 + -1 LLLLCLGGPQ 10 93 542.3166823737284 0 542.3168212771416 PEAK CID FTMS 0 0 0 5771 150008.9375 0.4768685826502101 3 -0.1165676116943359 5 Carbamidomethyl (C) _LLLLC(Carbamidomethyl (C))LGGPQ_ REV__ENSG00000134363|ENST00000256759|FST;REV__nc|ENSG00000134363|P19883-2|FST 3.944395688203298 0.3961065659209837 5 {I|L} 1 -1 3.4949 0.0 0.0 0.32281 0.0 0.0 630.2816741045925 336.2304781549438 966.5121522595364 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.32281 + + 18 + 1 2.246 68785.3 1.0 1784 3990 5771 SUDHL4_400M_050219_1,5776 SUDHL4_400M_050219_1,5776,LLLLCLGGPQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5777 29.812 428.0 188280.0 25 0 61826.0 + 19320 LELSSVHFQ 9 90 530.2778651535402 1058.5411773738804 2 530.2778198122978 MULTI CID FTMS 0 0 0 5771 123790.75 0.2232513954818422 -41 0.9905796051025392 6 Unmodified _LELSSVHFQ_ REV__ENST00000555784.5_1_10:84711227-84745358:+|nuORF 7.289230182591677 0.6602208344931196 5 Y 1 -1 10.969 0.0 0.0 1.0362 0.0 0.0 877.4666667311054 0.0 877.4666667311054 0.0 0.1722032235195314 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0362 - 39 + 1 2.246 66707.0 1.0 1785 3990 5771 SUDHL4_400M_050219_1,5777 SUDHL4_400M_050219_1,5777,LELSSVHFQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5778 29.821 514.0 228460.0 25 0 28797.0 -1 0 135 516.3016161029425 515.2943396363424 1 516.2999145388603 MULTI CID FTMS 0 0 0 5771 118062.0859375 0.0304976506716771 28 -0.3621425628662109 7 5 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 2.6189 0.0 0.0 350.21509876895806 0.0 350.21509876895806 0.0 1.3158481934746111 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.6189 - 40 + 1 2.246 92442.7 1.0 1786 3990 5771 SUDHL4_400M_050219_1,5778 SUDHL4_400M_050219_1,5778, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5779 29.825 168.0 362650.0 25 0 25419.0 + 34331 SLSHKNPF 8 95 465.2448200034711 928.4750870737422 2 465.2438232302666 MULTI CID FTMS 0 0 0 5771 116191.3515625 0.7871396171723698 -1 0.0275325775146484 8 Unmodified _SLSHKNPF_ REV__ENSG00000188738|ENST00000424728|FSIP2;REV__nc|ENSG00000188738|Q5CZC0-2|FSIP2 14.581692164780916 0.6954967302934248 5 {NN|[MP]|[D{I|L}]|[EV]}[HV][{M(Oxidation (M))|F}V]S{I|L} 8 -1 + 27.698 0.0 0.0 2.9832 2.9832 80.456 0.0 0.0 0.0 8.669687155616405 8.750612633916997 8.669687155616405 8.750612633916997 0 0.0 1.0457574905606752 0.535666875892183 0.0 {NN|[MP]|[D{I|L}]|[EV]}[HV][{M(Oxidation (M))|F}V]S{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HV][{M(Oxidation (M))|F}V]TV;{NN|[MP]|[D{I|L}]|[EV]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HA]T{I|L};{[TV]|[{I|L}S]}[DP]VG[WR];{NN|[MP]|[D{I|L}]|[EV]}[HV][KC][KS];{[TV]|[{I|L}S]}[DP]R[WR];[HQ]{M(Oxidation (M))|F}VG[WR];[HQ]{M(Oxidation (M))|F}R[WR] 2.9832;2.0408;1.5511;0.68082;0.6447;0.6389;0.28449;0.25222 -;-;-;-;-;-;-;- 121 + 1 2.246 53231.3 1.0 1787 3990 5771 SUDHL4_400M_050219_1,5779 SUDHL4_400M_050219_1,5779,SLSHKNPF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5781 29.842 800.0 105850.0 25 0 6819.0 33461 SIFLLEHLHY 10 118 636.3442594414104 0 636.3447753787041 PEAK CID FTMS 0 0 0 5780 87683.2109375 0.7086163349358375 2 -0.0680866241455078 1 Unmodified _SIFLLEHLHY_ ENSG00000187747|ENST00000345043|OR52B6 3.5964929083625545 0.3961065659209837 5 GV 2 10 6.4537 0.0 0.0 0.50789 0.0 0.0 872.4738449552832 239.0931185358032 1111.5669634910864 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GV 0.50789 - 37 + 1 2.243 69398.0 0.5799999833106995 1788 3991 5780 SUDHL4_400M_050219_1,5781 SUDHL4_400M_050219_1,5781,SIFLLEHLHY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5782 29.854 679.0 181150.0 25 0 14749.0 + 20648 LLQEPPRTV 9 125 526.8085451723466 1051.6025374114931 2 526.8083373904228 MULTI CID FTMS 0 0 0 5780 104570.671875 0.7626567828358656 -13 0.493387222290039 2 Unmodified _LLQEPPRTV_ ENSG00000177425|ENST00000328827|PAWR 38.17557092003332 0.0854718145212029 5 {I|L}{I|L}QEP 5 4 60.942 0.0 0.0 5.7952 0.0 0.0 0.0 468.25812708072505 468.25812708072505 32.143783536941726 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.805462187404089 0.3807196863200844 + {I|L}{I|L}QEP 5.7952 + + 653 + 1 2.243 99037.8 1.0 1789 3991 5780 SUDHL4_400M_050219_1,5782 SUDHL4_400M_050219_1,5782,LLQEPPRTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5783 29.868 800.0 50691.0 25 0 10322.0 -1 0 39 1040.1001264761314 3117.2785500285945 3 1040.432788074017 MULTI CID FTMS 0 0 0 5780 121687.09375 0.782673748273072 -3 0.1001472473144531 3 5 G 1 -1 6.9897 0.0 0.0 0.22422 0.0 0.0 1694.6182802543433 1362.6306856744752 3057.2489659288185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.22422 - 4 + 1 2.243 55502.7 0.5099999904632568 1790 3991 5780 SUDHL4_400M_050219_1,5783 SUDHL4_400M_050219_1,5783, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5785 29.884 800.0 83990.0 25 0 9038.2 -1 0 51 996.30378727587 4976.482554046351 5 996.9029418826104 MULTI CID FTMS 0 0 0 5784 93470.3515625 0.2963786195275185 5 -0.0693740844726562 1 5 QT 2 -1 5.5732 0.0 0.0 0.11199 0.0 0.0 4336.148399848888 408.1793612115844 4744.327761060473 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QT 0.11199 - 7 + 1 2.243 50453.7 0.4799999892711639 1791 3992 5784 SUDHL4_400M_050219_1,5785 SUDHL4_400M_050219_1,5785, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5786 29.887 131.0 442630.0 25 0 83702.0 + 35617 SVADIRNAY 9 67 504.7595172143353 1007.5044814954706 2 504.7589904665947 MULTI CID FTMS 0 0 0 5784 255237.484375 0.6990164335969865 -5 0.1747970581054687 2 Unmodified _SVADIRNAY_ ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4 29.081581746732265 0.1611639662936252 5 [VS]A[HQ]{I|L}DA[PA] 10 5 + 48.618 0.0 0.0 4.8256 4.8256 89.141 0.0 0.0 0.0 0.7306842758111998 35.85397752912844 0.7306842758111998 19.274400170273577 0 0.0 2.0 0.4247425010840047 0.4247425010840047 [VS]A[HQ]{I|L}DA[PA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ]{I|L}DA[PA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ]{I|L}W[PA];[VS]A[{M(Oxidation (M))|F}V][WD][KG] 4.8256;2.9125;2.7658;2.7631 -;-;-;- 75 1 2.243 50518.3 1.0 1792 3992 5784 SUDHL4_400M_050219_1,5786 SUDHL4_400M_050219_1,5786,SVADIRNAY False True SVADIRNAY 29.886963 504.758990466595 1557504.875 5784.0 nc|ENSG00000128815|Q6ZS81-5|WDFY4;;ENSG00000128815|ENST00000325239|WDFY4;;nc|ENSG00000128815|Q6ZS81-4|WDFY4 5.624078114827474 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5787 29.893 318.0 228710.0 25 0 23648.0 + -1 KMDPIISRV 9 97 537.8012470073822 1073.5879410815644 2 537.8012573122978 MULTI CID FTMS 0 0 0 5784 155016.828125 0.7230850075635081 -7 0.2431392669677734 3 Oxidation (M) _KM(Oxidation (M))DPIISRV_ ENSG00000159388|ENST00000290551|BTG2 20.580933911654288 0.2795815587326093 5 K{M(Oxidation (M))|F}DP{I|L}{I|L} 6 -1 39.157 0.0 0.0 3.6473 0.0 0.0 0.0 357.1898592584594 357.1898592584594 22.078343878162343 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 K{M(Oxidation (M))|F}DP{I|L}{I|L} 3.6473 + + 117 + 1 2.243 61658.0 1.0 1793 3992 5784 SUDHL4_400M_050219_1,5787 SUDHL4_400M_050219_1,5787,KMDPIISRV False False KMDPIISRV 29.892763 537.801257312298 1512151.0 5784.0 ENSG00000159388|ENST00000290551|BTG2 5.737113793690999 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5789 29.902 371.0 220700.0 25 0 45774.0 + 14115 IATSPFRF 8 96 469.75648074098746 0 469.7564269900322 PEAK CID FTMS 0 0 0 5788 143014.65625 1.0 0 0.0 1 Unmodified _IATSPFRF_ REV__ENSG00000164916|ENST00000328914|FOXK1;REV__nc|ENSG00000164916|P85037-2|FOXK1 14.581692164780916 0.4900557725783909 5 A{I|L} 2 -1 7.9588 0.0 0.0 0.84894 0.0 0.0 301.1990443903749 449.1678866022094 750.3669309925843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L} 0.84894 - 31 + 1 2.243 67191.3 1.0 1794 3993 5788 SUDHL4_400M_050219_1,5789 SUDHL4_400M_050219_1,5789,IATSPFRF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5790 29.905 144.0 333990.0 25 0 49813.0 + 13072 HDRLVEMPCT 10 44 600.7783346143823 1199.5421162955645 2 600.7789794802666 MULTI CID FTMS 0 0 0 5788 218546.734375 0.9846640950070874 1 -0.0229759216308593 2 Unmodified _HDRLVEMPCT_ REV__ENSG00000119125|ENST00000358399|GDA;REV__ENST00000376986.5_1_9:74764457-74810425:+|nuORF;REV__nc|ENSG00000119125|Q9Y2T3-3|GDA 9.38312468134398 0.6832340498775793 5 [R{I|L}]{I|L}DHD 6 -1 25.992 0.0 0.0 2.1668 0.0 0.0 0.0 447.13695623059954 447.13695623059954 22.012131247412512 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.7302046884880937 [R{I|L}]{I|L}DHD 2.1668 - 26 1 2.243 37337.9 1.0 1795 3993 5788 SUDHL4_400M_050219_1,5790 SUDHL4_400M_050219_1,5790,HDRLVEMPCT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5791 29.916 626.0 179760.0 25 0 8893.0 + -1 GVVTDMFTAI 10 148 535.2670975953314 1068.5196422574627 2 535.2683593630791 MULTI CID FTMS 0 0 0 5788 112435.3046875 0.2781531591602889 -15 0.5614738464355469 3 Oxidation (M) _GVVTDM(Oxidation (M))FTAI_ REV__ENSG00000164659|ENST00000450689|ELAPOR2 32.30548876998284 0.2428506522065767 5 QDT[WK]A{I|L} 7 -1 47.228 0.0 0.0 4.4199 0.0 0.0 208.08900025454312 0.0 208.08900025454312 0.0 35.00926430044245 0.0 0.0 0 2.1549471895720984 0.0 0.805462187404089 0.0 QDT[WK]A{I|L} 4.4199 - 514 + 1 2.243 90592.7 1.0 1796 3993 5788 SUDHL4_400M_050219_1,5791 SUDHL4_400M_050219_1,5791,GVVTDMFTAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5793 29.92 98.0 655370.0 25 0 136250.0 + + 3129 PAPPALGPR 9 76 439.2665232806816 876.5184936281631 2 439.2665893435478 MULTI CID FTMS 0 0 0 5792 461555.0 0.0701545511350535 44 -0.9685554504394532 1 Unmodified _AVPPALRGP_ nc|ENSG00000100368|P32927-2|CSF2RB;ENSG00000100368|ENST00000403662|CSF2RB 15.847184025352805 0.4077185912009129 5 {[VA]|[{I|L}G]}PPA 5 -1 42.447 0.0 0.0 4.8427 0.0 0.0 0.0 438.2469881647094 438.2469881647094 38.46787486224656 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.8427 + + 27 + 1 2.243 53473.6 1.0 1797 3994 5792 SUDHL4_400M_050219_1,5793 SUDHL4_400M_050219_1,5793,AVPPALRGP False False PAPPALGPR 29.920476 439.266589343548 209642.984375 5792.0 nc|ENSG00000100368|P32927-2|CSF2RB;;ENSG00000100368|ENST00000403662|CSF2RB 1.2659474164247513 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5794 29.924 156.0 292710.0 25 0 13514.0 + 1956 AMPPPPPQGV 10 92 495.7575038734756 0 495.7582580447197 PEAK CID FTMS 0 0 0 5792 151773.96875 0.534252955444994 31 -0.404632568359375 2 Unmodified _AMPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 15.847184025352805 0.3304572136216667 5 GQPH 4 9 13.633 0.0 0.0 1.3778 0.0 0.0 319.1557415342574 248.12262903385 567.2783705681074 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 GQPH 1.3778 - 92 + 1 2.243 40930.0 1.0 1798 3994 5792 SUDHL4_400M_050219_1,5794 SUDHL4_400M_050219_1,5794,AMPPPPPQGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5797 29.933 163.0 303320.0 25 0 48472.0 + 35190 SSDFQSNIA 9 89 484.7192315879157 967.4239102426316 2 484.7198974490166 MULTI CID FTMS 0 0 0 5796 166893.828125 0.9497489228946006 1 -0.0097103118896484 1 Unmodified _SSDFQSNIA_ chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 16.942295170755138 0.3780752226737986 5 A 1 8 13.495 0.0 0.0 1.3949 0.0 0.0 878.3754997585479 0.0 878.3754997585479 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 1.3949 + + 87 + 1 2.243 43133.0 1.0 1799 3996 5796 SUDHL4_400M_050219_1,5797 SUDHL4_400M_050219_1,5797,SSDFQSNIA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5798 29.937 209.0 308240.0 25 0 66548.0 + 27187 PGGHAGPA 8 76 663.3196083600001 662.3123318934 1 663.3190795779228 MULTI CID FTMS 0 0 0 5796 307360.46875 0.2667633254797709 7 -0.0378952026367187 2 Unmodified _PGGHAGPA_ REV__ENSG00000179776|ENST00000341529|CDH5;REV__nc|ENSG00000179776|P33151-2|CDH5 2.889219685676258 0.8067950007271085 5 {[ES]|[DT]|[{I|L}C]}VSE{I|L} 6 -1 + 63.549 0.0 0.0 9.5951 9.5951 96.771 0.0 0.0 0.0 4.348331157524967 43.54425638516595 4.348331157524967 11.020599913279623 0 1.4604093769761874 0.0 1.6549471895720984 0.0 {[ES]|[DT]|[{I|L}C]}VSE{I|L};[VS]ESE{I|L};{[ES]|[DT]|[{I|L}C]}SVE{I|L};{[ES]|[DT]|[{I|L}C]}SEV{I|L};{[MG]|[TS]}DVE{I|L};{[MG]|[TS]}DEV{I|L};{[QN]|[E{I|L}]|[KN]}D{[CA]|SS}{I|L} 9.5951;7.9311;7.4101;5.9474;5.8531;4.3903;2.3884 -;-;-;-;-;-;- 223 1 2.243 51582.8 1.0 1800 3996 5796 SUDHL4_400M_050219_1,5798 SUDHL4_400M_050219_1,5798,PGGHAGPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5802 29.953 281.0 316960.0 25 0 17910.0 + 29841 QQLYWSHPR 9 107 405.54029112768 1213.59904398324 3 405.5402404665947 MULTI CID FTMS 0 0 0 5801 123571.1875 0.1110032970770513 -14 0.3203582763671875 1 Unmodified _QQLYWSHPR_ ENSG00000213741|ENST00000245458|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50053001-50053064:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 27.628801355627647 0.1796483985696185 5 YWSHPR 6 3 40.807 0.0 0.0 3.3625 0.0 0.0 369.20008569443775 0.0 369.20008569443775 0.0 22.804369374623565 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.7134679910804405 + YWSHPR 3.3625 + + 164 + 1 2.243 74402.1 1.0 1801 3999 5801 SUDHL4_400M_050219_1,5802 SUDHL4_400M_050219_1,5802,QQLYWSHPR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5805 29.961 84.0 523880.0 25 0 44138.0 + 25681 NGVLTTYGV 9 70 462.2464685933747 922.4783842535494 2 462.2485229372978 MULTI CID FTMS 0 0 0 5804 360708.96875 0.199186483293939 10 -0.1288795471191406 1 Unmodified _NGVLTTYGV_ REV__ENSG00000171621|ENST00000328089|SPSB1 10.823927491677226 0.5436922275383211 5 GV 2 -1 16.198 0.0 0.0 1.7559 0.0 0.0 748.3776284935869 0.0 748.3776284935869 0.0 -10.31234684152075 -10.31234684152075 0.0 0 0.0 0.0 0.0 0.0 GV 1.7559 + + 26 + 1 2.243 42417.4 1.0 1802 4001 5804 SUDHL4_400M_050219_1,5805 SUDHL4_400M_050219_1,5805,NGVLTTYGV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5808 29.971 143.0 371560.0 25 0 48224.0 5365 DLKEFNFG 8 96 485.2364511428901 968.4583493525804 2 485.2363769412041 MULTI CID FTMS 0 0 0 5807 141265.421875 0.4906708898832211 -16 0.2723560333251953 1 Unmodified _DLKEFNFG_ ENST00000508274.5_1_4:13369878-13370058:-|nuORF 11.640296217721598 0.738950129755968 5 [{I|L}T]AAQ 5 7 23.97 0.0 0.0 2.475 0.0 0.0 0.0 481.1645315637709 481.1645315637709 11.9800716418942 0.0 0.0 0.0 0 0.0 2.0 0.4604093769761876 0.3054621874040891 [{I|L}T]AAQ 2.475 - 173 1 2.243 49050.2 1.0 1803 4003 5807 SUDHL4_400M_050219_1,5808 SUDHL4_400M_050219_1,5808,DLKEFNFG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5809 29.975 200.0 247340.0 25 0 37104.0 + 22921 LSDREVRL 8 88 494.2827555612866 986.5509581893732 2 494.2833129763603 MULTI CID FTMS 0 0 0 5807 145519.015625 0.921529344875484 -5 0.0243511199951171 2 Unmodified _LSDREVRL_ REV__ENSG00000226321|ENST00000690015|CROCC2 12.531546534597751 0.7257836412119636 5 {[TV]|[{I|L}S]}D 3 -1 22.051 0.0 0.0 2.2352 0.0 0.0 0.0 668.3849175001732 668.3849175001732 10.061668675368622 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[TV]|[{I|L}S]}D 2.2352 + + 33 1 2.243 41871.5 1.0 1804 4003 5807 SUDHL4_400M_050219_1,5809 SUDHL4_400M_050219_1,5809,LSDREVRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5810 29.989 800.0 116330.0 25 0 4722.4 + 29843 QQLYWSHPR 9 115 607.8072450262426 1213.5999371192852 2 608.3080932497978 MULTI CID FTMS 0 0 0 5807 86384.7421875 0.337499436852174 -13 0.1893157958984375 3 Unmodified _QQLYWSHPR_ ENSG00000213741|ENST00000245458|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50053001-50053064:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 34.93206674587334 0.1032771302489716 5 QQ{I|L}YWSHPR 9 0 + 48.247 0.0 0.0 3.9755 3.9755 80.311 0.0 0.0 0.0 5.642492736872597 5.2827377716704405 5.2827377716704405 5.2827377716704405 0 0.6382104921644451 0.0 0.0 0.2302046884880938 + + QQ{I|L}YWSHPR;QQ{I|L}YWSHRP;QQ{I|L}AA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HPR;QQ{I|L}AA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}HRP;[HT]{I|L}[SG]W{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RN];[HT][PS]W[HV]{I|L}[HT];[AG]Q{I|L}[W{M(Oxidation (M))|F}][RV][HT];QQ{I|L}[W{M(Oxidation (M))|F}][RV][HT];[AG]Q{I|L}[W{M(Oxidation (M))|F}]AA{I|L}[HT];QQ{I|L}[W{M(Oxidation (M))|F}]AA{I|L}[HT] 3.9755;3.5402;1.6717;1.2364;1.2229;0.8595;0.32283;0.28068;0.26663;0.22089 +;-;-;-;-;-;-;-;-;- + 450 + 1 2.243 71563.2 0.6399999856948853 1805 4003 5807 SUDHL4_400M_050219_1,5810 SUDHL4_400M_050219_1,5810,QQLYWSHPR True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5812 29.993 64.0 648960.0 25 0 39229.0 + 33416 FSHPQAAQL 9 78 499.75628915473175 997.4980253762636 2 499.7563659548759 MULTI CID FTMS 0 0 0 5811 617333.875 0.6722351517877148 10 -0.1214580535888671 1 Unmodified _SHFKHTEL_ ENSG00000269404|ENST00000595883|SPIB;nc|ENSG00000269404|Q01892-2|SPIB;ENST00000594188.1_1_19:50922219-50926375:+|nuORF 21.74664581756881 0.5868176546531598 5 QPAAQ{I|L} 6 7 43.633 0.0 0.0 4.3742 0.0 0.0 371.1591358869157 0.0 371.1591358869157 0.0 36.64320017660792 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 QPAAQ{I|L} 4.3742 - 342 1 2.243 37783.8 1.0 1806 4004 5811 SUDHL4_400M_050219_1,5812 SUDHL4_400M_050219_1,5812,SHFKHTEL False False FSHPQAAQL 29.993307 499.756365954876 11376354.0 5811.0 ENSG00000269404|ENST00000595883|SPIB;;nc|ENSG00000269404|Q01892-2|SPIB;;ENST00000594188.1_1_19:50922219-50926375:+|nuORF 7.1897322336832685 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5813 30.003 580.0 142550.0 25 0 30376.0 + 37921 TLYEHNNEL 9 99 566.7673089625091 1131.520064991818 2 566.7673828005791 MULTI CID FTMS 0 0 0 5811 154564.421875 0.0332887669186405 21 -0.3318042755126953 2 Unmodified _TLYEHNNEL_ ENSG00000094914|ENST00000209873|AAAS;ENST00000548880.1_1_12:53709415-53715282:-|nuORF;nc|ENSG00000094914|Q9NRG9-2|AAAS 41.8396318013385 0.0653578398400075 5 [{I|L}T][Y{M(Oxidation (M))|F}]{I|L}EN 7 5 36.942 0.0 0.0 3.2648 0.0 0.0 0.0 248.0793093317016 248.0793093317016 19.29496154379418 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3252574989159953 0.4247425010840047 [{I|L}T][Y{M(Oxidation (M))|F}]{I|L}EN 3.2648 - 622 + 1 2.243 70476.0 1.0 1807 4004 5811 SUDHL4_400M_050219_1,5813 SUDHL4_400M_050219_1,5813,TLYEHNNEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5814 30.007 199.0 315940.0 25 0 29219.0 + 29306 QIKPDMETY 9 99 562.768188440775 1123.52182394835 2 562.7686645388603 MULTI CID FTMS 0 0 0 5811 329239.40625 0.438371643265844 -8 0.0609512329101562 3 Unmodified _QIKPDMETY_ ENSG00000117614|ENST00000236273|SYF2;nc|ENSG00000117614|O95926-2|SYF2 43.85829265575387 0.0542763391141878 5 [DP]MEK[Q{I|L}]TY 9 6 + 48.795 0.0 0.0 4.3431 4.3431 75.871 0.0 0.0 0.0 1.7878877499903396 11.25447181216778 1.7878877499903396 0.5237875363565792 0 1.0 0.0 0.9247425010840048 0.9247425010840048 [DP]MEK[Q{I|L}]TY;[DP]MKE[Q{I|L}]TY;[Q{I|L}][DP]{M(Oxidation (M))|F}[Q{I|L}]TY;[Q{I|L}][DP][Q{I|L}]{M(Oxidation (M))|F}TY;[DP]MEKT[Q{I|L}]Y;[DP]MKET[Q{I|L}]Y;[Q{I|L}][DP]{M(Oxidation (M))|F}T[Q{I|L}]Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DP]K[Q{I|L}]TY;[DP][Q{I|L}]{M(Oxidation (M))|F}[Q{I|L}]TY;[DP]METK[Q{I|L}]Y 4.3431;4.2965;4.1839;3.916;3.2317;3.1851;3.0726;2.9937;2.9421;2.807 -;-;-;-;-;-;-;-;-;- 564 1 2.243 54465.3 1.0 1808 4004 5811 SUDHL4_400M_050219_1,5814 SUDHL4_400M_050219_1,5814,QIKPDMETY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5815 30.016 463.0 169800.0 25 0 20017.0 + + 40976 VLKGNWADLY 10 108 589.3172680145167 0 589.3172485232353 PEAK CID FTMS 0 0 0 5811 142963.9375 0.6321955779090854 11 -0.1254844665527343 4 Unmodified _VLYNFVFIY_ ENST00000608279.1_1_2:133104147-133104555:-|nuORF 19.438996006549623 0.2061572778002301 5 QNK 3 -1 18.302 0.0 0.0 1.5555 0.0 0.0 294.1638155431009 509.247906659809 803.4117222029099 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.4247425010840047 QNK 1.5555 - 84 + 1 2.243 62063.3 1.0 1809 4004 5811 SUDHL4_400M_050219_1,5815 SUDHL4_400M_050219_1,5815,VLYNFVFIY False False VLKGNWADLY 30.015502 589.317248523235 2628843.25 5811.0 ENST00000608279.1_1_2:133104147-133104555:-|nuORF -0.3124761879444122 2.0 False 10.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5817 30.025 293.0 314880.0 25 0 32830.0 37538 TLHPVWSQQ 9 107 548.2829799657695 1094.551406998339 2 548.2829467654228 MULTI CID FTMS 0 0 0 5816 267698.0625 0.177930072377253 34 -0.8989219665527344 1 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 19.62595529434964 0.305431704817896 5 [VP]SHEPPH[VP] 10 9 + 56.682 0.0 0.0 5.1786 5.1786 83.747 0.0 0.0 0.0 3.5331104218041745 45.713177516041895 3.5331104218041745 5.0 0 2.474907363720609 0.5686362358410126 0.2302046884880938 0.0 [VP]SHEPPH[VP];[VP]HSEPPH[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSEPPH[VP];[{I|L}T]AYPEH[HK];[{I|L}T]H[WH]H[HK];{[TV]|[{I|L}S]}[WY]PPH[VP];{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EC[VS]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PESVPH[VP];{[HG]|PP}HESVPH[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VS[HV]SH[VP] 5.1786;4.7218;4.68;4.0885;3.3018;3.2756;3.1242;2.64;2.4373;2.315 -;-;-;-;-;-;-;-;-;- 782 1 2.245 74964.5 1.0 1810 4005 5816 SUDHL4_400M_050219_1,5817 SUDHL4_400M_050219_1,5817,TLHPVWSQQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5818 30.028 144.0 352950.0 25 0 36029.0 + 1468 ALFMEDVV 8 76 462.2324676126202 0 462.2329589724541 PEAK CID FTMS 0 0 0 5816 103048.765625 1.0 0 0.0 2 Unmodified _ALFMEDVV_ REV__ENSG00000042753|ENST00000263270|AP2S1;REV__nc|ENSG00000042753|P53680-2|AP2S1 11.114462752807354 0.5290325060821968 5 G 1 -1 5.4846 0.0 0.0 0.59456 0.0 0.0 794.3550586609842 68.0513170831664 862.4063757441506 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.59456 - 7 + 1 2.245 50968.7 1.0 1811 4005 5816 SUDHL4_400M_050219_1,5818 SUDHL4_400M_050219_1,5818,ALFMEDVV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5822 30.042 222.0 277580.0 25 0 75837.0 -1 0 73 499.2753721626221 498.2680956960221 1 502.2842285037041 MULTI CID FTMS 0 0 0 5821 127259.828125 0.5172008058666769 29 -0.8379802703857422 1 5 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 2.5035 0.0 0.0 333.188915863794 0.0 333.188915863794 0.0 10.880456295278409 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.5035 - 5 + 1 2.245 52046.7 1.0 1812 4008 5821 SUDHL4_400M_050219_1,5822 SUDHL4_400M_050219_1,5822, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5823 30.056 800.0 57171.0 25 0 14127.0 -1 0 38 1191.1494576476168 3570.4265435430507 3 1191.483325183392 MULTI CID FTMS 0 0 0 5821 60383.1328125 0.0425081969052392 -14 0.1199684143066406 2 5 G 1 -1 6.9897 0.0 0.0 0.19577 0.0 0.0 2147.759747744026 1362.6300753229127 3510.3898230669383 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19577 - 5 + 1 2.245 47788.9 0.4300000071525574 1813 4008 5821 SUDHL4_400M_050219_1,5823 SUDHL4_400M_050219_1,5823, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5826 30.065 82.0 552390.0 25 0 51377.0 + -1 VMDSKIVQV 9 91 517.7801214711195 1033.545690009039 2 517.7815429568291 MULTI CID FTMS 0 0 0 5825 476920.125 0.852856497168069 3 -0.0456600189208984 1 Oxidation (M) _VM(Oxidation (M))DSKIVQV_ ENSG00000114030|ENST00000344337|KPNA1;ENSG00000025800|ENST00000373625|KPNA6;ENSG00000196911|ENST00000368564|KPNA5 29.84058131909904 0.1515068451768857 5 V{M(Oxidation (M))|F}D 3 -1 28.104 0.0 0.0 2.7192 0.0 0.0 0.0 669.3906954400999 669.3906954400999 1.6149115545003667 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 V{M(Oxidation (M))|F}D 2.7192 + + 91 + 1 2.245 39680.4 1.0 1814 4010 5825 SUDHL4_400M_050219_1,5826 SUDHL4_400M_050219_1,5826,VMDSKIVQV False False VMDSKIVQV 30.065077 517.781542956829 3008887.5 5825.0 ENSG00000114030|ENST00000344337|KPNA1;;ENSG00000025800|ENST00000373625|KPNA6;;ENSG00000196911|ENST00000368564|KPNA5 5.011542240778605 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5827 30.079 800.0 164690.0 25 0 16233.0 -1 EERCCFLY 8 142 588.7430449069341 1175.471536880668 2 588.7437011599541 MULTI CID FTMS 0 0 0 5825 52712.75 0.4998995345396696 -4 0.032623291015625 2 2 Carbamidomethyl (C) _EERC(Carbamidomethyl (C))C(Carbamidomethyl (C))FLY_ ENSG00000197442|ENST00000359015|MAP3K5 6.354104778181461 0.7857632046190106 5 Y 1 -1 14.604 0.0 0.0 1.2424 0.0 0.0 994.3971330494164 0.0 994.3971330494164 0.0 2.296962438796156 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2424 + + 322 + 1 2.245 102118.1 0.6499999761581421 1815 4010 5825 SUDHL4_400M_050219_1,5827 SUDHL4_400M_050219_1,5827,EERCCFLY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5828 30.081 107.0 552850.0 25 0 62831.0 + 5329 DLFPLLPM 8 75 473.2595430573034 944.5045331814068 2 473.2591430544853 MULTI CID FTMS 0 0 0 5825 438386.375 0.7739368574830161 19 -0.4149990081787109 3 Unmodified _DLFPLLPM_ REV__ENST00000324771.12_1_6:30867215-30867293:+|nuORF 5.760428011301431 0.7893668129297577 5 V 1 -1 10.969 0.0 0.0 1.1614 0.0 0.0 827.4252312788662 0.0 827.4252312788662 0.0 6.365006360318688 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1614 - 10 + 1 2.245 53211.5 1.0 1816 4010 5825 SUDHL4_400M_050219_1,5828 SUDHL4_400M_050219_1,5828,DLFPLLPM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5829 30.086 232.0 402860.0 25 0 66086.0 -1 0 101 465.2627453360792 464.2554688694792 1 465.2629272341728 MULTI CID FTMS 0 0 0 5825 179612.125 0.2064952216713372 -12 0.1191787719726562 4 5 {I|L} 1 -1 13.099 0.0 0.0 2.8215 0.0 0.0 333.1604504142042 0.0 333.1604504142042 0.0 12.385606273598311 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.8215 - 9 + 1 2.245 75603.7 1.0 1817 4010 5825 SUDHL4_400M_050219_1,5829 SUDHL4_400M_050219_1,5829, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5832 30.106 800.0 208260.0 25 0 29554.0 + -1 VTRMREMQI 9 125 590.3025509940181 1178.5905490548362 2 590.3019897341728 MULTI CID FTMS 0 0 0 5831 108416.5546875 0.7987852779607562 -3 0.033304214477539 1 Oxidation (M) _VTRMREM(Oxidation (M))QI_ REV__ENSG00000154258|ENST00000340001|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-3|ABCA9;REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9 6.723162845929126 0.6799819581413107 5 RWQ{I|L} 4 -1 21.019 0.0 0.0 1.7834 0.0 0.0 63.99877708142191 528.224411522374 592.223188603796 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 RWQ{I|L} 1.7834 - 158 + 1 2.245 127409.3 0.6100000143051147 1818 4012 5831 SUDHL4_400M_050219_1,5832 SUDHL4_400M_050219_1,5832,VTRMREMQI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5837 30.134 800.0 123320.0 25 0 9348.7 + 20649 LLQEPPRTV 9 136 526.8085451723466 1051.6025374114931 2 526.8088256716728 MULTI CID FTMS 0 0 0 5836 49651.5546875 0.3621196486719789 12 -0.3202095031738281 1 Unmodified _LLQEPPRTV_ ENSG00000177425|ENST00000328827|PAWR 38.17557092003332 0.0854718145212029 5 {I|L}{I|L}QEP 5 4 58.812 0.0 0.0 5.5926 0.0 0.0 0.0 468.2564791315063 468.2564791315063 39.48424707573757 0.0 0.0 0.0 0 0.805462187404089 2.0 0.9247425010840048 0.3807196863200844 + {I|L}{I|L}QEP 5.5926 + + 397 + 1 2.245 81837.6 0.5400000214576721 1819 4016 5836 SUDHL4_400M_050219_1,5837 SUDHL4_400M_050219_1,5837,LLQEPPRTV True True LLQEPPRTV 30.134406 526.808825671673 2640016.0 5836.0 ENSG00000177425|ENST00000328827|PAWR 5.954683780670166 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5840 30.146 309.0 205420.0 25 0 30120.0 + -1 SISPQLSMF 9 82 513.253770716709 0 513.2550536990166 PEAK CID FTMS 0 0 0 5839 107847.984375 0.465149273898279 -7 0.0527515411376953 1 Oxidation (M) _SISPQLSM(Oxidation (M))F_ REV__ENSG00000152207|ENST00000682523|CYSLTR2 7.289230182591677 0.3433663536648894 5 M 1 -1 4.6041 0.0 0.0 0.4494 0.0 0.0 511.29640754494295 379.1255587213501 890.421966266293 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.4494 + + 7 + 1 2.245 55387.6 1.0 1820 4018 5839 SUDHL4_400M_050219_1,5840 SUDHL4_400M_050219_1,5840,SISPQLSMF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5841 30.16 800.0 133090.0 25 0 6692.3 + 23985 LVVDNGSGM 9 105 891.4240646409846 890.4167881743846 1 891.4238159060478 MULTI CID FTMS 0 0 0 5839 125067.4296875 0.6220913866277696 -4 0.0283126831054687 2 Unmodified _LVVDNGSGM_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000418351.1_1_15:44282253-44282364:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENST00000493945.5_1_7:5567882-5569288:-|nuORF 163.03601447609117 0.0007003375663136 5 [{I|L}V]VDNGSGM 9 0 + 76.295 0.0 0.0 8.5685 8.5685 95.847 0.0 0.0 0.0 2.630456872329105 2.630456872329105 2.630456872329105 9.819393642848482 0 2.360924374808178 1.5228787452803376 0.6109243748081782 1.548455006504028 + + [{I|L}V]VDNGSGM;[{I|L}V]VDNG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{I|L}V][DN]VGSGM;[{I|L}V]VDGGGSGM;[{I|L}V]VDGGG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[{I|L}V][DN]GVSGM;[{I|L}V]VDN[NS]M;[{I|L}V][DN]GSVGM;[{I|L}V]VD[WE]M;[DN]V{I|L}VGSGM 8.5685;7.4657;6.603;6.5306;6.4255;6.0248;5.7489;5.3185;4.7483;4.614 +;-;-;-;-;-;-;-;-;- + 759 1 2.245 74358.1 0.5899999737739563 1821 4018 5839 SUDHL4_400M_050219_1,5841 SUDHL4_400M_050219_1,5841,LVVDNGSGM True True LVVDNGSGM 30.160335 891.423815906048 1067654.0 5839.0 ENST00000418351.1_1_15:44282253-44282364:-|nuORF;;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;;ENSG00000169067|ENST00000423391|ACTBL2;;ENSG00000075624|ENST00000646664|ACTB 6.002284367879232 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5843 30.168 196.0 244860.0 25 0 18554.0 + -1 FGAGMIHHAL 10 92 535.2670975953314 1068.5196422574627 2 535.2667114138603 MULTI CID FTMS 0 0 0 5842 126869.9453125 0.3138629471343287 11 -0.3246345520019531 1 Oxidation (M) _FGAGM(Oxidation (M))IHHAL_ REV__ENSG00000187554|ENST00000642603|TLR5 12.531546534597751 0.6372748319968624 5 DTT{[NV]|[RG]}A{I|L} 7 -1 42.963 0.0 0.0 4.0208 0.0 0.0 336.14383569190005 0.0 336.14383569190005 0.0 37.478882258621695 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 DTT{[NV]|[RG]}A{I|L} 4.0208 - 151 + 1 2.245 41542.1 1.0 1822 4019 5842 SUDHL4_400M_050219_1,5843 SUDHL4_400M_050219_1,5843,FGAGMIHHAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5844 30.177 525.0 190470.0 25 0 12291.0 + 33281 SFPQLSRLK 9 136 538.3176760411102 1074.6207991490205 2 538.3191406130791 MULTI CID FTMS 0 0 0 5842 95891.515625 0.6595694557157015 -6 0.05438232421875 2 Unmodified _SFPQLSRLK_ ENSG00000130182|ENST00000576985|ZSCAN10;nc|ENSG00000130182|Q96SZ4-3|ZSCAN10;nc|ENSG00000130182|Q96SZ4|ZSCAN10 34.93206674587334 0.1032771302489716 5 QPSE 4 7 33.162 0.0 0.0 3.0859 0.0 0.0 615.404588767775 0.0 615.404588767775 0.0 8.940162615404077 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3252574989159953 QPSE 3.0859 - 107 1 2.245 81375.7 1.0 1823 4019 5842 SUDHL4_400M_050219_1,5844 SUDHL4_400M_050219_1,5844,SFPQLSRLK True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5845 30.191 800.0 89425.0 25 0 15019.0 -1 0 47 1123.45695319359 3367.3490301809697 3 1123.793994128704 MULTI CID FTMS 0 0 0 5842 76818.359375 0.9534164748893018 -3 0.0423011779785156 3 5 E 1 -1 6.9897 0.0 0.0 0.20757 0.0 0.0 2711.120894049914 524.1646822565061 3235.2855763064204 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20757 - 30 + 1 2.245 61345.7 0.3899999856948852 1824 4019 5842 SUDHL4_400M_050219_1,5845 SUDHL4_400M_050219_1,5845, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5847 30.196 117.0 597060.0 25 0 90120.0 + 3130 AVPPALRGP 9 77 439.2665232806816 876.5184936281631 2 439.2663757205009 MULTI CID FTMS 0 0 0 5846 390845.78125 0.0594070269992158 70 -2.7921714782714844 1 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 5 {[VA]|[{I|L}G]}PPA 5 -1 42.447 0.0 0.0 4.8427 0.0 0.0 0.0 438.24725033808 438.24725033808 27.84318117920506 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.8427 + + 26 + 1 2.245 56047.1 1.0 1825 4020 5846 SUDHL4_400M_050219_1,5847 SUDHL4_400M_050219_1,5847,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5848 30.201 296.0 232860.0 25 0 14862.0 + 1957 AMPPPPPQGV 10 105 495.7575038734756 0 495.7575561404228 PEAK CID FTMS 0 0 0 5846 115121.7734375 0.4052351546289349 57 -2.405868530273437 2 Unmodified _AMPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 26.88365393820708 0.2428278298207118 5 GPQH 4 8 16.402 0.0 0.0 1.6576 0.0 0.0 319.1563746196801 248.1221865289672 567.2785611486473 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 GPQH 1.6576 - 221 + 1 2.245 55133.9 1.0 1826 4020 5846 SUDHL4_400M_050219_1,5848 SUDHL4_400M_050219_1,5848,AMPPPPPQGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5849 30.207 324.0 213340.0 25 0 35119.0 + + -1 ASNDYTQQATQSY 13 82 759.8211864476729 1517.6278199621456 2 759.8207275271416 MULTI CID FTMS 0 0 0 5846 203504.109375 0.6243920163044333 8 -0.247568130493164 3 Oxidation (M) _WWM(Oxidation (M))WTKEEGSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 3.2813086475875832 0.8596665074481906 5 [DN]{[CP]|[EA]}YT 6 -1 20.159 0.0 0.0 1.3283 0.0 0.0 0.0 821.3470331791956 821.3470331791956 1.2053577427437112 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.6139829889124311 0.2302046884880938 [DN]{[CP]|[EA]}YT 1.3283 - 397 1 2.245 52299.7 1.0 1827 4020 5846 SUDHL4_400M_050219_1,5849 SUDHL4_400M_050219_1,5849,WWMWTKEEGSY False False ASNDYTQQATQSY 30.206987 759.820727527142 1759170.75 5846.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 7.49034309387207 2.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5850 30.221 800.0 95493.0 25 0 6486.7 + + 29096 QENSSDFQSNIA 12 121 670.2922780041239 1338.5700030750477 2 670.2926513552666 MULTI CID FTMS 0 0 0 5846 84429.40625 0.5638349124276474 -4 0.072641372680664 4 Unmodified _QENSFDSDRLE_ chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 26.268140514670165 0.4754186812857754 5 [NS]QESD{M(Oxidation (M))|F}Q[NS][{I|L}A] 12 -1 + 73.673 0.0 0.0 5.5039 5.5039 86.457 0.0 0.0 0.0 7.360399075549893 8.384315473529185 7.360399075549893 7.360399075549893 0 0.4247425010840047 0.6989700043360187 2.899649864804614 1.4802046884880935 [NS]QESD{M(Oxidation (M))|F}Q[NS][{I|L}A];[AG]SNESD{M(Oxidation (M))|F}Q[NS][{I|L}A];[NS]QESD{M(Oxidation (M))|F}[AG][NS][{I|L}A];[NS][AG]ESD{M(Oxidation (M))|F}Q[NS][{I|L}A];[AG]SNESD{M(Oxidation (M))|F}[AG][NS][{I|L}A];[NS]QESDEE{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}A];{[QS]|[NT]}NESD{M(Oxidation (M))|F}Q[NS][{I|L}A];[AG]E[NS]SD{M(Oxidation (M))|F}Q[NS][{I|L}A];[NS]QE[WY]Q[NS][{I|L}A];[AG]SNESDEE{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}A] 5.5039;4.954;4.8242;4.8242;4.2762;4.2146;4.1439;3.7064;3.6873;3.6647 -;-;-;-;-;-;-;-;-;- 1858 1 2.245 62545.0 0.5799999833106995 1828 4020 5846 SUDHL4_400M_050219_1,5850 SUDHL4_400M_050219_1,5850,QENSFDSDRLE False False QENSSDFQSNIA 30.220818 670.292651355267 885906.4375 5846.0 chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;;ENSG00000169045|ENST00000393432|HNRNPH1;;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 7.585583527882894 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5852 30.226 73.0 786190.0 25 0 44457.0 + 29842 QQLYWSHPR 9 75 405.54029112768 1213.59904398324 3 405.5402404665947 MULTI CID FTMS 0 0 0 5851 473400.4375 0.4252529288044477 8 -0.2544727325439453 1 Unmodified _QQLYWSHPR_ ENSG00000213741|ENST00000245458|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50053001-50053064:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 21.53697664764585 0.2571576504437394 5 YWSHPR 6 3 39.524 0.0 0.0 3.2568 0.0 0.0 369.2008152675938 0.0 369.2008152675938 0.0 26.223512443940823 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.6643943297944485 + YWSHPR 3.2568 + + 189 + 1 2.245 52124.3 1.0 1829 4021 5851 SUDHL4_400M_050219_1,5852 SUDHL4_400M_050219_1,5852,QQLYWSHPR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5853 30.234 437.0 140800.0 25 0 12915.0 8639 EVEEDEYKAFY 11 106 711.3075970249783 1420.6006411167566 2 711.3083373904228 MULTI CID FTMS 0 0 0 5851 136076.765625 0.0050551110707632 -9 0.1312446594238281 2 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 5 [AG]NS[HN]AQQNA{M(Oxidation (M))|F}Y 13 10 + 68.709 0.0 0.0 4.8366 4.8366 79.483 0.0 0.0 0.0 4.607682420208064 10.696083918116408 4.607682420208064 2.04119982655925 0 0.8182503180159344 1.3979400086720375 0.2614393726401688 0.805462187404089 [AG]NS[HN]AQQNA{M(Oxidation (M))|F}Y;[AG]AHDEAQQNA{M(Oxidation (M))|F}Y;[AG]NS[HN]AQNQA{M(Oxidation (M))|F}Y;[AG]GGS[HN]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}S[HN]AQQNA{M(Oxidation (M))|F}Y;[AG]AHDEAQNQA{M(Oxidation (M))|F}Y;[AG]GGS[HN]AQNQA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}S[HN]AQNQA{M(Oxidation (M))|F}Y;[HD]E[QA]AQQNA{M(Oxidation (M))|F}Y;[HD][QA]EAQQNA{M(Oxidation (M))|F}Y 4.8366;4.6929;4.6247;4.5463;4.5123;4.481;4.3344;4.3004;4.2995;4.2116 -;-;-;-;-;-;-;-;-;- 2050 1 2.245 51343.8 1.0 1830 4021 5851 SUDHL4_400M_050219_1,5853 SUDHL4_400M_050219_1,5853,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5854 30.24 372.0 226420.0 25 0 19503.0 + 33905 SLFQYNMQ 8 115 515.7352271459395 1029.4559013586788 2 515.7344848513603 MULTI CID FTMS 0 0 0 5851 105907.4296875 0.759616585053808 -1 0.0301437377929687 3 Unmodified _SLFQYNMQ_ REV__ENST00000511818.1_1_4:16403833-16428014:+|nuORF 12.531546534597751 0.7257836412119636 5 [NP]{I|L}NEA 6 -1 27.017 0.0 0.0 2.6244 0.0 0.0 0.0 388.1300706304164 388.1300706304164 1.970907010300305 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7887254899964358 [NP]{I|L}NEA 2.6244 - 138 1 2.245 68744.8 1.0 1831 4021 5851 SUDHL4_400M_050219_1,5854 SUDHL4_400M_050219_1,5854,SLFQYNMQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5855 30.249 453.0 130280.0 25 0 6355.8 33083 SERPPYTWLQS 11 87 682.3338110010369 1362.6530690688735 2 682.3336059451103 MULTI CID FTMS 0 0 0 5851 105976.578125 0.642142431099287 -3 0.0825271606445312 4 Unmodified _SERPPYTWLQS_ nc|ENSG00000235098|E5RJM6-2|ANKRD65 23.78978130925829 0.5336113198261219 5 {[QV]|[N{I|L}]|[RA]|[KV]}[PG]{[WN]|[YH]}MG{M(Oxidation (M))|F}{I|L}SQ 12 9 + 41.642 0.0 0.0 3.056 3.056 73.698 0.0 0.0 0.0 6.231559930206792 25.900670913518383 6.231559930206792 1.1394335230683694 0 0.8371804965004639 0.0 0.0 1.2689301784845295 {[QV]|[N{I|L}]|[RA]|[KV]}[PG]{[WN]|[YH]}MG{M(Oxidation (M))|F}{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}[PG]{[QD]|[EN]|[WG]|[KD]|[RS]}GMG{M(Oxidation (M))|F}{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}[PG]{[WN]|[YH]}M{M(Oxidation (M))|F}G{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}[PG]{[QD]|[EN]|[WG]|[KD]|[RS]}GM{M(Oxidation (M))|F}G{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}[PG][C(Carbamidomethyl (C))R]DG{M(Oxidation (M))|F}{I|L}SQ;{[QS]|[NT]}N[C(Carbamidomethyl (C))R][WK]G{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}[PG]{[WN]|[YH]}MG{M(Oxidation (M))|F}Q{[TV]|[{I|L}S]};{[QV]|[N{I|L}]|[RA]|[KV]}[PG]{[QD]|[EN]|[WG]|[KD]|[RS]}GMG{M(Oxidation (M))|F}Q{[TV]|[{I|L}S]};{[QV]|[N{I|L}]|[RA]|[KV]}[PG][C(Carbamidomethyl (C))R]D{M(Oxidation (M))|F}G{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}[PG]{[WN]|[YH]}M{M(Oxidation (M))|F}GQ{[TV]|[{I|L}S]} 3.056;2.9723;2.6141;2.5305;2.1813;2.1193;2.0779;1.9943;1.7395;1.6361 -;-;-;-;-;-;-;-;-;- 206 1 2.245 50590.1 1.0 1832 4021 5851 SUDHL4_400M_050219_1,5855 SUDHL4_400M_050219_1,5855,SERPPYTWLQS False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 5857 30.255 128.0 373700.0 25 0 38926.0 + 2606 ASPDNPQAGI 10 80 485.2364511428901 968.4583493525804 2 485.2361328005791 MULTI CID FTMS 0 0 0 5856 243675.875 0.8463830486070429 3 -0.07177734375 1 Unmodified _ASPDNPQAGI_ REV__ENSG00000129159|ENST00000265969|KCNC1;REV__nc|ENSG00000129159|P48547|KCNC1 10.823927491677226 0.6659270209832991 5 [{I|L}T][RN]P 5 -1 14.792 0.0 0.0 1.5274 0.0 0.0 0.0 384.1223867883803 384.1223867883803 2.0282086401260493 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.3252574989159953 [{I|L}T][RN]P 1.5274 - 48 1 2.245 41995.1 1.0 1833 4022 5856 SUDHL4_400M_050219_1,5857 SUDHL4_400M_050219_1,5857,ASPDNPQAGI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5858 30.269 800.0 128250.0 25 0 7661.3 + 29844 QQLYWSHPR 9 114 607.8072450262426 1213.5999371192852 2 607.8081542849541 MULTI CID FTMS 0 0 0 5856 87943.7109375 0.2297204962657138 8 -0.2364215850830078 2 Unmodified _QQLYWSHPR_ ENSG00000213741|ENST00000245458|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50053001-50053064:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 49.55428908609986 0.0413471690215031 5 QQ{I|L}YWSHPR 9 0 + 61.599 0.0 0.0 5.0757 5.0757 90.268 0.0 0.0 0.0 41.12277542521856 14.070429635297522 14.070429635297522 23.85635503004492 0 0.6382104921644451 0.0 0.0 0.7134679910804405 + + QQ{I|L}YWSHPR;[HT][PS]MKY{I|L}[HT];QQ{I|L}YW[WK]Y;QQ{I|L}YW[WY]K;QQ{I|L}YKWWY;QQ{I|L}YKY{[ES]|[DT]|[{I|L}C]}R;[AG][VP][DN]KY{I|L}[HT];QQ{I|L}YW[WP]{[HG]|PP};[NP]{I|L}[DN]KY{I|L}[HT];[VP]Q[DN]KY{I|L}[HT] 5.0757;3.11;2.8754;2.521;2.1313;2.0525;1.9864;1.9838;1.6869;1.6071 +;-;-;-;-;-;-;-;-;- + 589 + 1 2.245 77879.5 0.75 1834 4022 5856 SUDHL4_400M_050219_1,5858 SUDHL4_400M_050219_1,5858,QQLYWSHPR True True QQLYWSHPR 30.26887 607.808154284954 15688036.0 5856.0 ENST00000557367.2_1_14:50053001-50053064:-|nuORF;;ENSG00000213741|ENST00000245458|RPS29;;nc|ENSG00000213741|P62273-2|RPS29;;ENST00000554075.1_1_14:50052568-50053064:-|nuORF 7.71771224339803 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5860 30.276 220.0 195040.0 25 0 17161.0 + 29307 QIKPDMETY 9 76 562.768188440775 1123.52182394835 2 562.7684203982353 MULTI CID FTMS 0 0 0 5859 254639.3125 0.339044026145366 11 -0.4636039733886719 1 Unmodified _QIKPDMETY_ ENSG00000117614|ENST00000236273|SYF2;nc|ENSG00000117614|O95926-2|SYF2 32.30548876998284 0.1201446275138228 5 TK[CS]TY 6 6 31.515 0.0 0.0 2.805 0.0 0.0 422.2154407469812 0.0 422.2154407469812 0.0 9.855224231777555 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 TK[CS]TY 2.805 - 91 + 1 2.245 40571.6 1.0 1835 4023 5859 SUDHL4_400M_050219_1,5860 SUDHL4_400M_050219_1,5860,QIKPDMETY True True QIKPDMETY 30.275571 562.768420398235 8637812.0 5859.0 ENSG00000117614|ENST00000236273|SYF2;;nc|ENSG00000117614|O95926-2|SYF2 8.225951353708902 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5861 30.28 212.0 302730.0 25 0 24335.0 + 39738 RLTPKLMEV 9 93 551.8180499409436 1101.6215469486872 2 551.8184081912041 MULTI CID FTMS 0 0 0 5859 256258.515625 0.7305889848304475 -2 0.0480499267578125 2 Unmodified _VEKLKVHSY_ ENSG00000147677|ENST00000521861|EIF3H 20.453626601364224 0.2830276176381075 5 {NN|[MP]|[D{I|L}]|[EV]}T 3 7 24.481 0.0 0.0 2.2223 0.0 0.0 0.0 769.438630038784 769.438630038784 1.5224967362874509 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.0 {NN|[MP]|[D{I|L}]|[EV]}T 2.2223 - 54 1 2.245 53377.2 1.0 1836 4023 5859 SUDHL4_400M_050219_1,5861 SUDHL4_400M_050219_1,5861,VEKLKVHSY False False RLTPKLMEV 30.279603 551.818408191204 3062608.0 5859.0 ENSG00000147677|ENST00000521861|EIF3H 3.895506650830309 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5862 30.293 800.0 225900.0 25 0 15362.0 + + 40863 RLADKSVLV 9 123 500.81113054275545 999.6077081523108 2 500.8110839724541 MULTI CID FTMS 0 0 0 5859 180403.5625 0.8577777890043226 -1 0.0203208923339843 3 Oxidation (M) _VLPTLM(Oxidation (M))VIV_ ENST00000536090.1_1_12:6626539-6627126:+|nuORF;ENSG00000010292|ENST00000315579|NCAPD2 53.57557251787612 0.0325303259649373 5 [VS][WK]{[VA]|[{I|L}G]}V{I|L}V 9 -1 + 50.995 0.0 0.0 5.1015 5.1015 88.279 0.0 0.0 0.0 6.5398434942549954 26.03122110131273 6.5398434942549954 9.291746928241125 0 0.7614393726401688 1.6989700043360187 1.7059771852360797 0.0 [VS][WK]{[VA]|[{I|L}G]}V{I|L}V;[VS][WK]{[VA]|[{I|L}G]}{I|L}VV;[VS]{I|L}[NS][R{I|L}]{I|L}V;[{I|L}V]S[NS][R{I|L}]{I|L}V;[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TP]V{I|L}V;[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TP]{I|L}VV;[VS]{I|L}{[CP]|[EA]}[RK]VV;[{I|L}V]S{[CP]|[EA]}[RK]VV 5.1015;4.172;3.999;3.8242;3.8229;2.8933;2.2457;2.0709 -;-;-;-;-;-;-;- 501 1 2.245 139546.5 0.6899999976158142 1837 4023 5859 SUDHL4_400M_050219_1,5862 SUDHL4_400M_050219_1,5862,VLPTLMVIV False False RLADKSVLV 30.293417 500.811083972454 1163083.875 5859.0 ENST00000536090.1_1_12:6626539-6627126:+|nuORF;;ENSG00000010292|ENST00000315579|NCAPD2 4.972675959269206 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5863 30.298 252.0 407520.0 25 0 19990.0 -1 0 147 358.2181731852838 357.2108967186838 1 359.2151672244072 MULTI CID FTMS 0 0 0 5859 131224.109375 0.8934550969914516 -1 0.0203208923339843 4 5 K 1 -1 16.594 0.0 0.0 4.6454 0.0 0.0 211.1050292643853 0.0 211.1050292643853 0.0 6.593793813122062 0.0 0.0 0 0.0 0.0 0.0 0.2614393726401688 K 4.6454 - 14 + 1 2.245 86126.8 1.0 1838 4023 5859 SUDHL4_400M_050219_1,5863 SUDHL4_400M_050219_1,5863, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5864 30.3 101.0 499370.0 25 0 159720.0 -1 TPLCRLAL 8 65 472.2729051166529 0 472.2731506228447 PEAK CID FTMS 0 0 0 5859 231269.359375 0.8251916040437695 38 -1.7004528045654297 5 Carbamidomethyl (C) _TPLC(Carbamidomethyl (C))RLAL_ nc|ENSG00000015532|Q9H1B5-2|XYLT2 14.581692164780916 0.4900557725783909 5 A 1 -1 3.9794 0.0 0.0 0.4222 0.0 0.0 786.4046989278386 82.06688867740468 868.4715876052433 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.4222 + + 19 + 1 2.245 45047.7 1.0 1839 4023 5859 SUDHL4_400M_050219_1,5864 SUDHL4_400M_050219_1,5864,TPLCRLAL False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 5865 30.303 135.0 319020.0 25 0 11208.0 -1 NPQQCLPVL 9 93 534.7807687686596 1067.5469846041192 2 534.7819702029228 MULTI CID FTMS 0 0 0 5859 199806.09375 0.4127735495215346 -5 0.1305770874023437 6 Carbamidomethyl (C) _NPQQC(Carbamidomethyl (C))LPVL_ ENSG00000151376|ENST00000524826|ME3;ENST00000525957.1_1_11:86200203-86209163:-|nuORF;nc|ENSG00000151376|Q16798-2|ME3 8.593279151180031 0.6146971463335029 5 {I|L} 1 -1 13.979 0.0 0.0 1.3095 0.0 0.0 936.4520424427895 0.0 936.4520424427895 0.0 -0.0050844460847798 -0.0050844460847798 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3095 + + 35 + 1 2.245 40150.9 1.0 1840 4023 5859 SUDHL4_400M_050219_1,5865 SUDHL4_400M_050219_1,5865,NPQQCLPVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5866 30.31 389.0 166720.0 25 0 21525.0 -1 0 69 600.2901467386498 599.2828702720498 1 600.2897216677666 MULTI CID FTMS 0 0 0 5859 170519.6875 0.2326697864810412 -6 0.1344451904296875 7 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.245 50510.9 1.0 1841 4023 5859 SUDHL4_400M_050219_1,5866 SUDHL4_400M_050219_1,5866, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5868 30.316 189.0 278120.0 25 0 25340.0 + 37913 TLYARHSFT 9 93 548.2829799657695 1094.551406998339 2 548.2831909060478 MULTI CID FTMS 0 0 0 5867 203212.5 0.1350686459785734 53 -2.2865467071533203 1 Unmodified _TLYARHSFT_ REV__ENSG00000187815|ENST00000372706|ZFP69 12.174745833636583 0.5071271664557081 5 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EW 6 -1 27.927 0.0 0.0 2.5514 0.0 0.0 0.0 231.113580571936 231.113580571936 12.469209759735696 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EW 2.5514 - 220 + 1 2.245 47373.8 1.0 1842 4024 5867 SUDHL4_400M_050219_1,5868 SUDHL4_400M_050219_1,5868,TLYARHSFT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5869 30.32 216.0 692540.0 25 0 199080.0 -1 0 60 1191.1494576476168 3570.4265435430507 3 1191.483447253704 MULTI CID FTMS 0 0 0 5867 1280370.0 0.9013480675234918 2 -0.050201416015625 2 5 E 1 -1 11.237 0.0 0.0 0.31473 0.0 0.0 2914.199359587422 524.1624196632199 3438.361779250642 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E 0.31473 - 129 + 1 2.245 130515.0 1.0 1843 4024 5867 SUDHL4_400M_050219_1,5869 SUDHL4_400M_050219_1,5869, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5871 30.331 448.0 263950.0 25 0 31975.0 + 8945 FAMNDESVFY 10 109 611.7601677875299 1221.5057826418597 2 611.7596313357353 MULTI CID FTMS 0 0 0 5870 187856.609375 0.0655677464022339 -5 0.1296501159667968 1 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 32.30548876998284 0.2428506522065767 5 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 96.642 0.0 0.0 7.9117 7.9117 93.145 0.0 0.0 0.0 7.269987279362624 74.18108734954758 7.269987279362624 9.164539485499247 0 1.0 0.0 0.8945990182825422 1.6549471895720984 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}S[HN]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}S[HN][AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}S[HN]QGGA{M(Oxidation (M))|F}Y 7.9117;7.1614;7.1614;7.1614;6.4141;6.4141;6.0664;5.9909;5.2406;5.2406 -;-;-;-;-;-;-;-;-;- 571 1 2.245 93630.7 1.0 1844 4025 5870 SUDHL4_400M_050219_1,5871 SUDHL4_400M_050219_1,5871,FAMNDESVFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5872 30.335 249.0 271680.0 25 0 29534.0 + 44314 YLNEKAVSY 9 100 543.7769968155703 1085.5394406979406 2 543.7773315310478 MULTI CID FTMS 0 0 0 5870 182439.75 0.4506992932492285 -3 0.07177734375 2 Unmodified _YLNEKAVSY_ ENSG00000073921|ENST00000393346|PICALM;ENST00000531771.5_1_11:85718509-85733504:-|nuORF;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-5|PICALM 38.61474834105838 0.0830609365873449 5 Y{I|L}N[PG]VAK 8 5 50.002 0.0 0.0 4.6062 0.0 0.0 0.0 240.0631502740844 240.0631502740844 24.322829462567217 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.3252574989159953 Y{I|L}N[PG]VAK 4.6062 - 260 + 1 2.245 56024.8 1.0 1845 4025 5870 SUDHL4_400M_050219_1,5872 SUDHL4_400M_050219_1,5872,YLNEKAVSY True True YLNEKAVSY 30.335496 543.777331531048 2122494.75 5870.0 nc|ENSG00000073921|Q13492-5|PICALM;;ENSG00000073921|ENST00000393346|PICALM;;ENST00000531771.5_1_11:85718509-85733504:-|nuORF;;nc|ENSG00000073921|Q13492-3|PICALM;;nc|ENSG00000073921|Q13492-4|PICALM;;nc|ENSG00000073921|Q13492-2|PICALM 6.668951988220215 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5873 30.343 396.0 206340.0 25 0 14711.0 + + 25498 RLQDLQQQV 9 120 564.3122722445522 1126.6099915559043 2 564.3125488162041 MULTI CID FTMS 0 0 0 5870 142810.625 1.0 0 0.0 3 Unmodified _NELRIQQIN_ ENSG00000186532|ENST00000305513|SMYD4 31.26834338654808 0.1333407332142048 5 [AG]VER{I|L}QQQV 10 -1 + 71.055 0.0 0.0 6.3069 6.3069 82.383 0.0 0.0 0.0 1.192030850147901 16.53212513775344 1.192030850147901 1.192030850147901 0 0.3054621874040891 2.0 0.2887254899964357 0.2887254899964357 [AG]VER{I|L}QQQV;{NN|[MP]|[D{I|L}]|[EV]}QR{I|L}QQQV;[AG][R{I|L}]D{I|L}QQQV;[AG]Q[KQ]{I|L}QQQV;[AG]VER{I|L}QQ[AG]V;[AG]VER{I|L}[AG]QQV;[AG]VER{I|L}Q[AG]QV;{NN|[MP]|[D{I|L}]|[EV]}QR{I|L}[AG]QQV;{NN|[MP]|[D{I|L}]|[EV]}QR{I|L}QQ[AG]V;{NN|[MP]|[D{I|L}]|[EV]}[AG]R{I|L}QQQV 6.3069;6.2011;5.6114;5.5208;5.4935;5.4935;5.4935;5.3838;5.3838;5.3838 -;-;-;-;-;-;-;-;-;- 414 1 2.245 66875.3 1.0 1846 4025 5870 SUDHL4_400M_050219_1,5873 SUDHL4_400M_050219_1,5873,NELRIQQIN False False RLQDLQQQV 30.34259 564.312548816204 1610224.75 5870.0 ENSG00000186532|ENST00000305513|SMYD4 6.002106189727783 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5874 30.346 197.0 376440.0 25 0 49593.0 + 202 AAIKPGTPL 9 87 434.26959994877967 866.5246469643594 2 434.2699157595634 MULTI CID FTMS 0 0 0 5870 103177.5 0.542195414539701 -3 0.07177734375 4 Unmodified _AAPVKTALP_ ENSG00000114686|ENST00000264995|MRPL3 12.531546534597751 0.4974689918368763 5 H[{I|L}P] 3 7 10.686 0.0 0.0 1.2332 0.0 0.0 501.317476409475 0.0 501.317476409475 0.0 1.1534707842213034 0.0 0.0 0 0.5 0.0 0.0 0.0 H[{I|L}P] 1.2332 - 20 + 1 2.245 62712.1 1.0 1847 4025 5870 SUDHL4_400M_050219_1,5874 SUDHL4_400M_050219_1,5874,AAPVKTALP False False AAIKPGTPL 30.346346 434.269915759563 1249226.75 5870.0 ENSG00000114686|ENST00000264995|MRPL3 2.694275220235189 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5875 30.36 800.0 174510.0 25 0 9393.2 + 18425 KVYENYPTY 9 155 588.7835712327834 1175.5525895323667 2 588.7821533083916 MULTI CID FTMS 0 0 0 5870 112939.5703125 1.0 0 0.0 5 Unmodified _KVYENYPTY_ ENSG00000124795|ENST00000652689|DEK;nc|ENSG00000124795|P35659-2|DEK 46.020951573049366 0.0490941689151868 5 PTY 3 6 29.979 0.0 0.0 2.5502 0.0 0.0 796.3791714188886 0.0 796.3791714188886 0.0 2.905534631704107 0.0 0.0 0 0.5 0.0 0.6307196863200843 0.0 + PTY 2.5502 + + 408 + 1 2.245 106438.1 0.5799999833106995 1848 4025 5870 SUDHL4_400M_050219_1,5875 SUDHL4_400M_050219_1,5875,KVYENYPTY True True KVYENYPTY 30.360177 588.782153308392 571007.75 5870.0 ENSG00000124795|ENST00000652689|DEK;;nc|ENSG00000124795|P35659-2|DEK 2.621034582455953 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5877 30.365 115.0 437660.0 25 0 73072.0 + 13998 IAAPEFPTV 9 82 472.7561469628122 0 472.7559692263603 PEAK CID FTMS 0 0 0 5876 154760.71875 0.6715007211827736 1 -0.0417194366455078 1 Unmodified _IAAPEFPTV_ REV__ENST00000280527.6_1_2:36623834-36623918:+|nuORF 24.67388899826682 0.1587009629985955 5 PT 2 -1 10.177 0.0 0.0 1.0787 0.0 0.0 628.3182498808995 114.0565661066039 742.3748159875034 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 PT 1.0787 + + 35 + 1 2.245 42923.9 1.0 1849 4026 5876 SUDHL4_400M_050219_1,5877 SUDHL4_400M_050219_1,5877,IAAPEFPTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5878 30.369 219.0 282000.0 25 0 27904.0 + -1 ELKGLKADMK 10 89 574.8193605932336 0 574.8187133669853 PEAK CID FTMS 0 0 0 5876 67744.125 0.7371520645703277 1 -0.0417194366455078 2 Oxidation (M) _ELKGLKADM(Oxidation (M))K_ REV__ENSG00000168916|ENST00000513986|ZNF608;REV__nc|ENSG00000168916|Q9ULD9-2|ZNF608 8.745405648335112 0.3843311602926832 5 {M(Oxidation (M))|F}T 2 -1 13.271 0.0 0.0 1.1564 0.0 0.0 145.13046815736703 751.390460722181 896.5209288795481 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}T 1.1564 - 284 + 1 2.245 50738.0 1.0 1850 4026 5876 SUDHL4_400M_050219_1,5878 SUDHL4_400M_050219_1,5878,ELKGLKADMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5879 30.371 64.0 1469300.0 25 0 431390.0 + 11764 GLKNGVPAV 9 92 427.7584199537727 853.5022869743455 2 427.7583801150322 MULTI CID FTMS 0 0 0 5876 959767.375 0.8045905260604334 -4 0.1116504669189453 3 Unmodified _GLKNGVPAV_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 44.40701690623563 0.0526327925666318 5 [PA][KG][KS]PAV 9 5 + 34.503 0.0 0.0 4.0426 4.0426 80.201 0.0 0.0 0.0 1.4950692809903714 19.899182048155104 1.4950692809903714 4.827796776480472 0 0.805462187404089 1.3979400086720375 0.0 0.3807196863200844 [PA][KG][KS]PAV;[PA][VG]NKVAV;[PA]{[NV]|[RG]}GKVAV;[PA][VG]GGKVAV;[NG]VK{[VA]|[{I|L}G]}PAV;[PA][KG]{I|L}[QA]AV;{[VA]|[{I|L}G]}[PG]NKVAV;{[VA]|[{I|L}G]}[NP]GKVAV;[PA][KG]{[NV]|[RG]}VAV;{[VA]|[{I|L}G]}[PG]GGKVAV 4.0426;3.4769;3.4769;3.4233;3.3419;2.5444;2.4516;2.4516;2.4516;2.398 -;-;-;-;-;-;-;-;-;- 417 1 2.245 80079.1 1.0 1851 4026 5876 SUDHL4_400M_050219_1,5879 SUDHL4_400M_050219_1,5879,GLKNGVPAV True True GLKNGVPAV 30.370823 427.758380115032 9258965.0 5876.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 0.8195118010044098 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5880 30.373 110.0 538090.0 25 0 62251.0 + -1 ICFNTDEAAFY 11 93 675.7892150325297 1349.5638771318593 2 675.7899047732353 MULTI CID FTMS 0 0 0 5876 418242.40625 0.3219807477806646 -4 0.1116504669189453 4 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FNTDEAAFY_ REV__ENSG00000163746|ENST00000696113|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7-3|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7|PLSCR2 17.11289562659939 0.6791789249425932 5 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y 11 -1 + 73.549 0.0 0.0 5.4498 5.4498 80.746 0.0 0.0 0.0 4.967940394481673 34.93765746125478 4.967940394481673 1.6334835803019132 0 0.8182503180159344 0.0 1.1549471895720984 2.5356668758921828 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]SQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]GGQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]N[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]S[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]SQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]SQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HC][WP]NA{M(Oxidation (M))|F}Y 5.4498;5.3288;4.7734;4.7734;4.7734;4.7734;4.6524;4.6524;4.6524;2.5983 -;-;-;-;-;-;-;-;-;- 1746 1 2.245 50582.0 1.0 1852 4026 5876 SUDHL4_400M_050219_1,5880 SUDHL4_400M_050219_1,5880,ICFNTDEAAFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5881 30.377 208.0 337120.0 25 0 39670.0 -1 TKNERQVMK 9 92 575.3079603778868 0 575.3059570193291 PEAK CID FTMS 0 0 0 5876 184218.375 0.2121966337878202 -4 0.1116504669189453 5 Oxidation (M) _TKNERQVM(Oxidation (M))K_ ENSG00000138640|ENST00000264344|FAM13A;ENST00000508360.5_1_4:89653076-89671014:-|nuORF;ENST00000511573.5_1_4:89649686-89680064:-|nuORF;nc|ENSG00000138640|O94988-1|FAM13A;nc|ENSG00000138640|O94988-3|FAM13A;nc|ENSG00000138640|O94988-5|FAM13A;nc|ENSG00000138640|O94988-6|FAM13A 25.399314129420983 0.152124705672316 5 KTT[{I|L}P][DV]TT 9 -1 44.944 0.0 0.0 3.9129 0.0 0.0 63.99788224270157 125.07248865299064 189.0703708956922 0.0 0.0 0.0 0.0 0 1.274227503252014 0.0 1.8098943791441968 0.0 KTT[{I|L}P][DV]TT 3.9129 - 148 + 1 2.245 57878.4 1.0 1853 4026 5876 SUDHL4_400M_050219_1,5881 SUDHL4_400M_050219_1,5881,TKNERQVMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5882 30.388 628.0 183160.0 25 0 9213.3 29008 QEALKKQEA 9 181 522.7881881512241 1043.561823369248 2 522.7883178591728 MULTI CID FTMS 0 0 0 5876 97016.484375 1.0 0 0.0 6 Unmodified _QEALKKQEA_ ENSG00000100629|ENST00000555265|CEP128;nc|ENSG00000100629|Q6ZU80-1|CEP128;nc|ENSG00000100629|Q6ZU80-3|CEP128 21.53697664764585 0.2571576504437394 5 [VP]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}QEA 9 5 + 34.517 0.0 0.0 3.3076 3.3076 75.854 0.0 0.0 0.0 2.46387711700914 1.8880819301613911 1.8880819301613911 2.46387711700914 0 0.2844671551717407 0.8538719643217619 0.0 0.0 [VP]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}QEA;[Q{I|L}][{I|L}T]E{I|L}QEA;[{I|L}V]RSE{I|L}QEA;[VP]{I|L}V[KC]WEA;{[CP]|[EA]}QKK{I|L}QEA;[VP]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[AG]EA;{[CP]|[EA]}GAKK{I|L}QEA;[Q{I|L}][{I|L}T]E{I|L}[AG]EA;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AKK{I|L}QEA;[AG]{I|L}[{I|L}T]E{I|L}QEA 3.3076;3.0715;2.9623;2.5619;2.5611;2.4252;2.341;2.1891;2.1803;2.1274 -;-;-;-;-;-;-;-;-;- 979 1 2.245 91511.2 1.0 1854 4026 5876 SUDHL4_400M_050219_1,5882 SUDHL4_400M_050219_1,5882,QEALKKQEA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5883 30.402 800.0 194590.0 25 0 10461.0 + 7452 EGPARPSAL 9 217 449.2433105441379 896.4720681550758 2 449.2426330447197 MULTI CID FTMS 0 0 0 5876 93000.140625 0.6511407965129012 -3 0.0913295745849609 7 Unmodified _EGPARPSAL_ REV__ENST00000261402.6_1_12:106532584-106533082:-|nuORF 51.629811660486645 0.0367964933207742 5 [EP]GAR[PS]A{I|L} 9 -1 + 56.154 0.0 0.0 6.2638 6.2638 92.696 0.0 0.0 0.0 5.433714334498646 5.433714334498646 5.433714334498646 14.369244799681496 0 2.291447825603967 1.5228787452803376 2.110924374808178 0.0 [EP]GAR[PS]A{I|L};[EP]GAR{[SA]|[TG]}P{I|L};[EP]QR[PS]A{I|L};[EP]GA[WK]P{I|L};[EP]GAR[PS]{I|L}A;[EP]QR{[SA]|[TG]}P{I|L};[EP]Q[WK]P{I|L};[EP]GAR{[SA]|[TG]}{I|L}P;[EP]GA[WK]{I|L}P;[EP]QR[PS]{I|L}A 6.2638;4.661;4.5723;4.4719;3.8195;3.5755;3.3941;2.9578;2.7688;2.7341 -;-;-;-;-;-;-;-;-;- 489 1 2.245 119130.3 0.959999978542328 1855 4026 5876 SUDHL4_400M_050219_1,5883 SUDHL4_400M_050219_1,5883,EGPARPSAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5885 30.408 207.0 262910.0 25 0 28849.0 45665 YVSLTCKL 8 81 463.7544733911096 925.4943938490192 2 463.7546264529228 MULTI CID FTMS 0 0 0 5884 177411.09375 0.7970410186234633 -3 0.0919208526611328 1 Unmodified _YVSLTCKL_ ENST00000260197.11_1_11:121501710-121501857:+|nuORF 21.74664581756881 0.5868176546531598 5 VYMATTK{I|L} 8 5 + 63.072 0.0 0.0 6.815 6.815 85.062 0.0 0.0 0.0 36.40978057358332 2.04119982655925 2.04119982655925 2.04119982655925 0 0.4247425010840047 2.0 0.0 0.0 VYMATTK{I|L};VYMATT{I|L}K;VY{[TV]|[{I|L}S]}CTK{I|L};VY{[TV]|[{I|L}S]}CT{I|L}K 6.815;6.5944;6.402;6.1814 -;-;-;- 81 + 1 2.245 46287.2 1.0 1856 4027 5884 SUDHL4_400M_050219_1,5885 SUDHL4_400M_050219_1,5885,YVSLTCKL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5886 30.422 800.0 191990.0 25 0 20212.0 + -1 SMANGMNAV 9 127 893.8825926797507 1785.7506324263013 2 894.3818237185478 MULTI CID FTMS 0 0 0 5884 229095.546875 1.0 0 0.0 2 nc|ENSG00000197562|Q96S21-2|RAB40C;ENST00000561781.1_1_16:675886-677619:+|nuORF;ENSG00000197562|ENST00000248139|RAB40C 5 {M(Oxidation (M))|F}AGGQQA[HD]{M(Oxidation (M))|F}Y 11 -1 72.782 0.0 0.0 4.0757 0.0 0.0 546.2288477578885 0.0 546.2288477578885 0.0 9.17247285497642 0.0 0.0 0 0.0 0.0 0.6382104921644451 1.4698565171985374 {M(Oxidation (M))|F}AGGQQA[HD]{M(Oxidation (M))|F}Y 4.0757 - 24830 + 1 2.245 107754.4 0.5299999713897705 1857 4027 5884 SUDHL4_400M_050219_1,5886 SUDHL4_400M_050219_1,5886, False False SMANGMNAV 30.422229 894.381823718548 1024125.8125 5884.0 nc|ENSG00000197562|Q96S21-2|RAB40C;;ENST00000561781.1_1_16:675886-677619:+|nuORF;;ENSG00000197562|ENST00000248139|RAB40C 4.738165060679118 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5887 30.426 180.0 435010.0 25 0 34598.0 30452 RDSKIPGTV 9 96 486.7772390997949 971.5399252663898 2 486.7770873904228 MULTI CID FTMS 0 0 0 5884 238748.6875 0.2181239252198552 -4 0.1330490112304687 3 Unmodified _RDSKIPGTV_ ENSG00000054793|ENST00000338821|ATP9A;nc|ENSG00000054793|O75110-2|ATP9A 36.12702656103203 0.0967173616627612 5 {[TV]|[{I|L}S]}V{[{M(Oxidation (M))|F}H]|[RQ]}AVTV 9 7 + 61.294 0.0 0.0 6.309 6.309 93.919 0.0 0.0 0.0 3.9152808756837487 47.314601490825495 3.9152808756837487 26.406629545409984 0 0.8807196863200843 1.3010299956639813 0.7134679910804405 0.0 {[TV]|[{I|L}S]}V{[{M(Oxidation (M))|F}H]|[RQ]}AVTV;{NN|[MP]|[D{I|L}]|[EV]}V[W{I|L}]VEV 6.309;3.5909 -;- 362 1 2.245 64809.5 1.0 1858 4027 5884 SUDHL4_400M_050219_1,5887 SUDHL4_400M_050219_1,5887,RDSKIPGTV True False RLNEAAVTV 30.425706 486.777087390423 5610014.0 5884.0 nc|ENSG00000166946|O95273-2|CCNDBP1;;ENST00000566833.1_1_15:43477651-43481519:+|nuORF;;ENSG00000166946|ENST00000300213|CCNDBP1 4.456643581390381 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5888 30.432 374.0 271410.0 25 0 34847.0 + 31337 RMQKEITAL 9 133 363.8747694880103 1088.602479064231 3 363.8742858767509 MULTI CID FTMS 0 0 0 5884 131587.65625 0.2199066228330152 -4 0.1330490112304687 4 Unmodified _RMQKEITAL_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 31.26834338654808 0.1333407332142048 5 [TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KEAT{I|L}{I|L} 10 5 + 43.311 0.0 0.0 3.9786 3.9786 81.723 0.0 0.0 0.0 10.457574905606748 25.29788219061176 10.457574905606748 7.275071725447404 0 0.3182503180159344 1.6989700043360187 0.7742275032520141 0.3054621874040891 [TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KEAT{I|L}{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KT{I|L}AE{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KAET{I|L}{I|L};[{I|L}T][NS]KEAT{I|L}{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KAT{I|L}E{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KTA{I|L}E{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KATE{I|L}{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KTAE{I|L}{I|L};[{I|L}T][NS]KT{I|L}AE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}T[TP][DV]{I|L} 3.9786;3.3103;2.8695;2.7979;2.7102;2.5955;2.593;2.4782;2.1296;1.9634 -;-;-;-;-;-;-;-;-;- 791 1 2.245 83610.7 1.0 1859 4027 5884 SUDHL4_400M_050219_1,5888 SUDHL4_400M_050219_1,5888,RMQKEITAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5889 30.435 139.0 690880.0 25 0 171440.0 + 7850 REDLESSGL 9 101 502.804533587996 1003.594514242792 2 503.3062316775322 MULTI CID FTMS 0 0 0 5884 360831.5625 0.7385379320508082 -2 0.0815925598144531 5 Unmodified _ELLFVTIGL_ nc|ENSG00000189159|Q9UK76-3|JPT1;nc|ENSG00000189159|Q9UK76-2|JPT1;ENSG00000189159|ENST00000409753|JPT1 13.50788311687929 0.4710407108020397 5 Y 1 9 13.979 0.0 0.0 1.3929 0.0 0.0 822.5200188588061 0.0 822.5200188588061 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3929 - 54 + 1 2.245 76588.5 1.0 1860 4027 5884 SUDHL4_400M_050219_1,5889 SUDHL4_400M_050219_1,5889,ELLFVTIGL False False REDLESSGL 30.435214 503.306231677532 875032.9375 5884.0 nc|ENSG00000189159|Q9UK76-3|JPT1;;nc|ENSG00000189159|Q9UK76-2|JPT1;;ENSG00000189159|ENST00000409753|JPT1 -0.2875798642635345 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5890 30.438 160.0 463990.0 25 0 31034.0 9073 FFFAQLSLS 9 120 530.2778651535402 1058.5411773738804 2 530.2797119021416 MULTI CID FTMS 0 0 0 5884 295234.875 0.5324436425068695 -4 0.1330490112304687 6 Unmodified _FFFAQLSLS_ ENST00000574285.2_1_16:9203969-9204164:+|nuORF 20.453626601364224 0.2830276176381075 5 {[QN]|[E{I|L}]|[KN]}[PA]TE{I|L}S{[TV]|[{I|L}S]} 10 5 + 31.117 0.0 0.0 2.9396 2.9396 75.625 0.0 0.0 0.0 5.487192182223257 16.126266687487487 5.487192182223257 2.929191103590437 0 0.0 0.7695510786217261 0.5 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}[PA]TE{I|L}S{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}[HS]S{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}[VP]D{[TV]|[{I|L}S]};[TP][WQ]Q{I|L}S{[TV]|[{I|L}S]};[TP]A{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}S{[TV]|[{I|L}S]};{[CA]|SS}VV[HM]{I|L}S{[TV]|[{I|L}S]};[TP]A{[QN]|[E{I|L}]|[KN]}E{I|L}S{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[TA][HM]{I|L}S{[TV]|[{I|L}S]};[KQ]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[VP]D{[TV]|[{I|L}S]};[WE][VP]E{I|L}S{[TV]|[{I|L}S]} 2.9396;2.6629;2.3785;1.6249;1.5817;1.5202;1.4636;1.3245;1.2008;1.1875 -;-;-;-;-;-;-;-;-;- 314 1 2.245 59329.0 1.0 1861 4027 5884 SUDHL4_400M_050219_1,5890 SUDHL4_400M_050219_1,5890,FFFAQLSLS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5892 30.446 186.0 441760.0 25 0 146540.0 -1 0 90 492.2622794919801 491.2550030253801 1 492.2625305056572 MULTI CID FTMS 0 0 0 5891 162861.234375 0.3194195817444002 -4 0.1282463073730468 1 5 {M(Oxidation (M))|F} 1 -1 13.979 0.0 0.0 2.8457 0.0 0.0 326.17571638162855 0.0 326.17571638162855 0.0 2.870156338638594 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.8457 - 27 + 1 2.238 69501.4 1.0 1862 4028 5891 SUDHL4_400M_050219_1,5892 SUDHL4_400M_050219_1,5892, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5893 30.46 800.0 126090.0 25 0 9007.8 33282 SFPQLSRLK 9 138 538.3176760411102 1074.6207991490205 2 538.3180419802666 MULTI CID FTMS 0 0 0 5891 72098.4609375 0.4959139745423816 3 -0.1320037841796875 2 Unmodified _SFPQLSRLK_ ENSG00000130182|ENST00000576985|ZSCAN10;nc|ENSG00000130182|Q96SZ4-3|ZSCAN10;nc|ENSG00000130182|Q96SZ4|ZSCAN10 16.149105407346934 0.3995459350917656 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}R 4 6 29.513 0.0 0.0 2.7464 0.0 0.0 0.0 534.3637550418515 534.3637550418515 5.2473594786049205 0.0 0.0 0.0 0 0.5 2.0 0.2742275032520141 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}R 2.7464 - 212 1 2.238 82571.4 0.5299999713897705 1863 4028 5891 SUDHL4_400M_050219_1,5893 SUDHL4_400M_050219_1,5893,SFPQLSRLK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5894 30.472 707.0 273600.0 25 0 16815.0 -1 0 242 380.2338188759181 379.2265424093181 1 380.2341491580009 MULTI CID FTMS 0 0 0 5891 110915.984375 1.0 0 0.0 3 5 {M(Oxidation (M))|F} 1 -1 13.099 0.0 0.0 3.4541 0.0 0.0 214.14696584857435 0.0 214.14696584857435 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 3.4541 - 44 + 1 2.238 152184.5 1.0 1864 4028 5891 SUDHL4_400M_050219_1,5894 SUDHL4_400M_050219_1,5894, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5895 30.476 196.0 397790.0 25 0 154910.0 33657 SITPAHWK 8 86 470.25743306817833 938.5003132031568 2 470.2570678591728 MULTI CID FTMS 0 0 0 5891 204089.28125 0.702578490472059 -1 0.036325454711914 4 Unmodified _SITPAHWK_ chr19:58306216-58312169|16|11.12|0.0|20.09|+|2|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,acceptor,+,58312169,58313278|ZNF8-ERVK3-1,None|9;chr19:58306216-58312266|18|11.0|0.0|20.07|+|1|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,acceptor,+,58312266,58313278|ZNF8-ERVK3-1,None|7 7.910154910731844 0.7763180056447161 5 {I|L} 1 7 13.979 0.0 0.0 1.4895 0.0 0.0 807.405371041827 0.0 807.405371041827 0.0 4.515449934959719 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4895 + + 30 + 1 2.238 65802.3 1.0 1865 4028 5891 SUDHL4_400M_050219_1,5895 SUDHL4_400M_050219_1,5895,SITPAHWK False False False False TE_chimeric_transcript PXD020620_cell_line SUDHL4_400M_050219_1 5897 30.481 153.0 539000.0 25 0 82974.0 + 3131 AVPPALRGP 9 87 439.2665232806816 876.5184936281631 2 439.2664062380791 MULTI CID FTMS 0 0 0 5896 344482.5625 0.0523599994497741 79 -2.908044815063477 1 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 5 {[VA]|[{I|L}G]}PPA 5 -1 42.095 0.0 0.0 4.8026 0.0 0.0 0.0 438.2467093764174 438.2467093764174 31.38210492164445 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.8026 + + 37 + 1 2.238 72208.0 1.0 1866 4029 5896 SUDHL4_400M_050219_1,5897 SUDHL4_400M_050219_1,5897,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5898 30.485 234.0 308520.0 25 0 22143.0 + 29207 GQIIGEGRY 9 115 496.2575338787988 990.5005148243976 2 496.7604858279228 MULTI CID FTMS 0 0 0 5896 256354.46875 1.0 0 0.0 2 Unmodified _QGIVPETFT_ nc|ENSG00000144029|P82675-2|MRPS5;ENST00000475895.5_1_2:95770271-95787536:-|nuORF;ENSG00000144029|ENST00000272418|MRPS5 11.640296217721598 0.521594087909532 5 [PS]{I|L}{I|L}GE{[NV]|[RG]}Y 9 7 + 27.959 0.0 0.0 2.8227 2.8227 83.501 0.0 0.0 0.0 13.254092551055749 8.90855530574932 8.90855530574932 13.046341199328063 0 0.0 0.0 0.0 0.2887254899964357 [PS]{I|L}{I|L}GE{[NV]|[RG]}Y;[PS]{I|L}{I|L}Y{[QD]|[EN]|[WG]|[KD]|[RS]}GV;[PS]{I|L}[KS]{[CP]|[EA]}PY;[PS]{I|L}Y{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}GV;[PS]{I|L}YAA[RD]V 2.8227;1.5056;0.54035;0.30233;0.098752 -;-;-;-;- 173 + 1 2.238 61200.1 1.0 1867 4029 5896 SUDHL4_400M_050219_1,5898 SUDHL4_400M_050219_1,5898,QGIVPETFT False False GQIIGEGRY 30.485256 496.760485827923 1710789.75 5896.0 nc|ENSG00000144029|P82675-2|MRPS5;;ENST00000475895.5_1_2:95770271-95787536:-|nuORF;;ENSG00000144029|ENST00000272418|MRPS5 4.965346813201904 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5900 30.49 2.2 20730000.0 25 0 2331900.0 8640 EVEEDEYKAFY 11 62 711.3075970249783 1420.6006411167566 2 711.3091918826103 MULTI CID FTMS 0 0 0 5899 26918650.0 1.0 0 0.0 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 5 [QA]HDEAQQNA{M(Oxidation (M))|F}Y 12 8 + 67.756 0.0 0.0 4.7695 4.7695 83.8 0.0 0.0 0.0 5.618303036000093 50.7660257331741 5.618303036000093 6.817496819840663 0 0.8935078169319297 0.0 0.0 1.4698565171985374 [QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QNA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;[QA]HDAEQQNA{M(Oxidation (M))|F}Y;[QA]E[HD]AQQNA{M(Oxidation (M))|F}Y;[HD][QA]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{[YC]|[HE]}EAQQNA{M(Oxidation (M))|F}Y;[QA]H[NS]NQQNA{M(Oxidation (M))|F}Y 4.7695;4.2896;4.1291;4.1291;4.1291;4.0364;3.9453;3.8758;3.8076;3.6615 -;-;-;-;-;-;-;-;-;- 865 1 2.238 40696.3 1.0 1868 4030 5899 SUDHL4_400M_050219_1,5900 SUDHL4_400M_050219_1,5900,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5901 30.492 112.0 617150.0 25 0 41650.0 + 30966 RLAQHITYV 9 78 550.8143089260869 1099.6140649189738 2 550.8143188357353 MULTI CID FTMS 0 0 0 5899 481600.84375 0.4594043767347767 -1 0.0096778869628906 2 Unmodified _RLAQHITYV_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7 19.256988751693697 0.3154191944385105 5 H{I|L}T[YV] 5 4 32.263 0.0 0.0 2.934 0.0 0.0 468.2828108373808 0.0 468.2828108373808 0.0 25.27310937020445 0.0 0.0 0 0.805462187404089 0.0 0.5 0.0 + H{I|L}T[YV] 2.934 + + 70 1 2.238 57975.6 1.0 1869 4030 5899 SUDHL4_400M_050219_1,5901 SUDHL4_400M_050219_1,5901,RLAQHITYV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5902 30.494 97.0 450240.0 25 0 44921.0 + 40629 VLDDSTAKL 9 67 481.2647417511772 960.5149305691544 2 481.2642089724541 MULTI CID FTMS 0 0 0 5899 210388.046875 0.5133417105830512 -1 0.0096778869628906 3 Unmodified _VLDDSTAKL_ ENSG00000015133|ENST00000389857|CCDC88C 17.11289562659939 0.3734572693229295 5 V{I|L} 2 7 45.217 0.0 0.0 4.7075 0.0 0.0 0.0 745.3373667342319 745.3373667342319 34.73197507588033 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + V{I|L} 4.7075 + + 91 + 1 2.238 41826.0 1.0 1870 4030 5899 SUDHL4_400M_050219_1,5902 SUDHL4_400M_050219_1,5902,VLDDSTAKL False True VLDDSTAKL 30.494228 481.264208972454 1873192.0 5899.0 ENSG00000015133|ENST00000389857|CCDC88C 3.356841325759888 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5903 30.5 315.0 302320.0 25 0 67838.0 + 31858 RTIAPIIGR 9 106 498.81905021501166 995.6235474968232 2 498.8189575076103 MULTI CID FTMS 0 0 0 5899 164507.28125 0.7601180094510946 1 -0.0852775573730468 4 Unmodified _RTIAPIIGR_ ENSG00000096401|ENST00000371477|CDC5L 14.40537977576856 0.4467465336100671 5 RT 2 7 27.831 0.0 0.0 2.7953 0.0 0.0 0.0 735.4532564752561 735.4532564752561 6.549471895720984 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.4247425010840047 0.0 + RT 2.7953 + + 61 + 1 2.238 78546.5 1.0 1871 4030 5899 SUDHL4_400M_050219_1,5903 SUDHL4_400M_050219_1,5903,RTIAPIIGR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5904 30.508 438.0 154090.0 25 0 12212.0 + 39114 TYDYTGNIV 9 125 523.2439788396315 1044.473404746063 2 523.2437621951103 MULTI CID FTMS 0 0 0 5899 108871.734375 0.8728044732821502 -1 0.0096778869628906 5 Unmodified _TYDYTGNIV_ REV__ENSG00000214160|ENST00000397676|ALG3;REV__ENST00000461415.5_1_3:183962900-183966669:-|nuORF;REV__ENST00000482048.1_1_3:183962900-183966716:-|nuORF;REV__nc|ENSG00000214160|Q92685-2|ALG3 15.847184025352805 0.4077185912009129 5 [PS]QSDDAN[{I|L}V] 10 -1 + 19.702 0.0 0.0 1.8863 1.8863 73.121 0.0 0.0 0.0 2.267064957871362 4.50789546324723 2.267064957871362 1.7609125905568137 0 0.2614393726401688 0.0 1.4124379954164592 0.0 [PS]QSDDAN[{I|L}V];[PS]QS[WD]N[{I|L}V];[PS]QDDSAN[{I|L}V];DD[YK][WR]Y;DD[YK][RV]SY;[PS]QSDDAGG[{I|L}V];[PS][AG]SDDAN[{I|L}V];{[CP]|[EA]}[QA]DDAN[{I|L}V];[PS]QS{[QG]|[NA]}DD[{I|L}V];[PS]QS[WD]GG[{I|L}V] 1.8863;1.7177;1.3587;1.1006;1.0791;1.0089;1.0089;0.90684;0.89955;0.83611 -;-;-;-;-;-;-;-;-;- 463 1 2.238 59863.5 1.0 1872 4030 5899 SUDHL4_400M_050219_1,5904 SUDHL4_400M_050219_1,5904,TYDYTGNIV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5905 30.522 800.0 65788.0 25 0 8286.6 -1 0 49 1024.3836717042057 2046.7527904752112 2 1024.889208972454 MULTI CID FTMS 0 0 0 5899 80250.1875 0.9063066247312608 1 -0.0852775573730468 6 5 {M(Oxidation (M))|F}ANQQAE 7 -1 40.566 0.0 0.0 1.9819 0.0 0.0 807.225889173489 448.16083704166255 1255.3867262151516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 {M(Oxidation (M))|F}ANQQAE 1.9819 - 426 + 1 2.238 45190.6 0.4900000095367431 1873 4030 5899 SUDHL4_400M_050219_1,5905 SUDHL4_400M_050219_1,5905, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5906 30.53 482.0 278060.0 25 0 16516.0 + -1 AQCSRVHCHWC 11 142 722.2960487696768 1442.5775446061534 2 722.2957031130791 MULTI CID FTMS 0 0 0 5899 136463.59375 0.8586122634204771 1 -0.0852775573730468 7 2 Carbamidomethyl (C) _AQC(Carbamidomethyl (C))SRVHC(Carbamidomethyl (C))HWC_ REV__ENSG00000179292|ENST00000327259|TMEM151A 13.042465956692816 0.7638483625850725 5 [QA]HDED[YG]QA{M(Oxidation (M))|F}Y 12 -1 + 78.419 0.0 0.0 5.4361 5.4361 85.806 0.0 0.0 0.0 10.94212497064703 53.8566032266867 10.94212497064703 6.665090889956673 0 2.8807196863200843 0.0 0.5 1.1861818737241734 [QA]HDED[YG]QA{M(Oxidation (M))|F}Y;[QA]HDE[NP][HD]A{M(Oxidation (M))|F}Y;[QA]HD[DP]QA[HD]{M(Oxidation (M))|F}Y;[QA]HD[DP]Q[HD]A{M(Oxidation (M))|F}Y;[QA]HD[DP][HD]QA{M(Oxidation (M))|F}Y;[QA]HDED[YG][AG]A{M(Oxidation (M))|F}Y;[QA]HD{[{M(Oxidation (M))|F}D]|MM}{[DS]|[MA]|[CV]|TT}QA{M(Oxidation (M))|F}Y;[QA]HDE[NP]A[HD]{M(Oxidation (M))|F}Y;[QA]HDE[NP][WH]{M(Oxidation (M))|F}Y;[QA]HDE[NP][YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}Y 5.4361;4.974;4.8666;4.8361;4.833;4.8054;4.6058;4.3635;4.2518;4.2518 -;-;-;-;-;-;-;-;-;- 3444 1 2.238 95233.0 1.0 1874 4030 5899 SUDHL4_400M_050219_1,5906 SUDHL4_400M_050219_1,5906,AQCSRVHCHWC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5907 30.544 800.0 60917.0 25 0 14916.0 -1 0 39 1185.8274621939456 3554.460557182037 3 1186.156054675579 MULTI CID FTMS 0 0 0 5899 129589.5078125 0.789454028122579 -2 0.0467262268066406 8 5 G{M(Oxidation (M))|F} 2 -1 5.5732 0.0 0.0 0.15679 0.0 0.0 2146.745421539262 1200.6040007529032 3347.3494222921654 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 0.15679 - 14 + 1 2.238 48807.1 0.4799999892711639 1875 4030 5899 SUDHL4_400M_050219_1,5907 SUDHL4_400M_050219_1,5907, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5908 30.557 730.0 328130.0 25 0 23930.0 + 31033 RLGVISKV 8 230 436.2901397763635 870.565726619527 2 436.2895995974541 MULTI CID FTMS 0 0 0 5899 110177.703125 0.4831228378467632 -1 0.0096778869628906 9 Unmodified _RLGVISKV_ ENSG00000092148|ENST00000399332|HECTD1 24.020572477871973 0.5389365498350341 5 {I|L}SKV 4 4 37.295 0.0 0.0 4.284 0.0 0.0 425.2760792462906 0.0 425.2760792462906 0.0 24.336068845642203 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 + {I|L}SKV 4.284 + + 182 1 2.238 184181.3 1.0 1876 4030 5899 SUDHL4_400M_050219_1,5908 SUDHL4_400M_050219_1,5908,RLGVISKV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5909 30.571 800.0 77834.0 25 0 3123.9 -1 WAHCMWNFMC 10 117 737.7648794226964 0 737.7652465701103 PEAK CID FTMS 0 0 0 5899 93582.734375 0.7714870921070801 -1 0.0096778869628906 10 2 Carbamidomethyl (C),2 Oxidation (M) _WAHC(Carbamidomethyl (C))M(Oxidation (M))WNFM(Oxidation (M))C(Carbamidomethyl (C))_ ENST00000521508.1_1_13:52586574-52593168:+|nuORF 0.4583401331227399 0.3961065659209837 5 EDH 3 -1 13.104 0.0 0.0 0.8893 0.0 0.0 893.2889008358239 196.0732363336547 1089.3621371694787 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 EDH 0.8893 - 82 + 1 2.238 51431.6 0.5799999833106995 1877 4030 5899 SUDHL4_400M_050219_1,5909 SUDHL4_400M_050219_1,5909,WAHCMWNFMC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5911 30.576 192.0 277760.0 25 0 16442.0 + 29539 QLNEQVHSL 9 92 534.2773372831996 0 534.2775756716728 PEAK CID FTMS 0 0 0 5910 219995.984375 0.3020120072556277 2 -0.1384601593017578 1 Unmodified _QLNEQVHSL_ ENSG00000166974|ENST00000300249|MAPRE2;nc|ENSG00000166974|Q15555-3|MAPRE2;nc|ENSG00000166974|Q15555-4|MAPRE2;nc|ENSG00000166974|Q15555-5|MAPRE2 66.45667989310934 0.0141522131504411 5 NEQVN 5 5 27.51 0.0 0.0 2.5794 0.0 0.0 241.1440703453997 238.1205996149047 479.2646699603045 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 1.0114393726401687 NEQVN 2.5794 - 164 + 1 2.238 47052.1 1.0 1878 4031 5910 SUDHL4_400M_050219_1,5911 SUDHL4_400M_050219_1,5911,QLNEQVHSL True True QLNEQVHSL 30.576493 534.277575671673 3927735.25 5910.0 ENSG00000166974|ENST00000300249|MAPRE2;;nc|ENSG00000166974|Q15555-4|MAPRE2;;nc|ENSG00000166974|Q15555-3|MAPRE2;;nc|ENSG00000166974|Q15555-5|MAPRE2 7.885785102844238 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5912 30.584 441.0 156390.0 25 0 19345.0 + 33788 SLCNSMRSI 9 112 505.74339076719855 1009.4722286011972 2 505.7444640994072 MULTI CID FTMS 0 0 0 5910 10752.666015625 0.1187138345730936 1 -0.0812263488769531 2 Unmodified _SLCNSMRSI_ REV__MER57-int_dup428|chr6:33132600-33134898:-|2.586491035679624|0.0776769780525371|5.06|48.0|75|3|sense 15.847184025352805 0.4077185912009129 5 Y 1 -1 14.604 0.0 0.0 1.4467 0.0 0.0 828.3975348529534 0.0 828.3975348529534 0.0 -1.593793813122062 -1.593793813122062 0.0 0 0.0 0.0 0.0 0.0 Y 1.4467 - 109 + 1 2.238 59588.5 1.0 1879 4031 5910 SUDHL4_400M_050219_1,5912 SUDHL4_400M_050219_1,5912,SLCNSMRSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5913 30.586 44.0 1863400.0 25 0 221540.0 + 35262 SSFIGKVKS 9 88 476.7768264047742 951.5390998763484 2 476.7768432497978 MULTI CID FTMS 0 0 0 5910 1283952.25 0.3032187966749075 -1 0.0852775573730468 3 Unmodified _SSFIGKVKS_ REV__ENST00000335500.8_1_17:42474164-42474308:-|nuORF 34.40172386719151 0.1061884637610825 5 {[CA]|SS}{M(Oxidation (M))|F}{I|L}SKVGK 9 -1 + 54.166 0.0 0.0 5.6924 5.6924 92.203 0.0 0.0 0.0 32.27752226111541 11.92393970847391 11.92393970847391 24.560997120194795 0 1.1307196863200843 0.0 0.7614393726401688 0.1421590589602531 {[CA]|SS}{M(Oxidation (M))|F}{I|L}SKVGK;{[CA]|SS}{M(Oxidation (M))|F}K{[TV]|[{I|L}S]}VGK 5.6924;3.1112 -;- 178 + 1 2.238 70125.3 1.0 1880 4031 5910 SUDHL4_400M_050219_1,5913 SUDHL4_400M_050219_1,5913,SSFIGKVKS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5914 30.588 119.0 871880.0 25 0 165970.0 + 30967 RLAQHITYV 9 88 367.5452519971769 1099.613926591731 3 367.5452148318291 MULTI CID FTMS 0 0 0 5910 440794.75 1.0 0 0.0 4 Unmodified _RLAQHITYV_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7 29.081581746732265 0.1611639662936252 5 TH{I|L}TYV 6 4 45.31 0.0 0.0 4.1206 0.0 0.0 367.2374745099625 0.0 367.2374745099625 0.0 31.33085333508717 0.0 0.0 0 0.3054621874040891 0.0 0.5 0.0 TH{I|L}TYV 4.1206 - 65 1 2.238 94397.6 1.0 1881 4031 5910 SUDHL4_400M_050219_1,5914 SUDHL4_400M_050219_1,5914,RLAQHITYV False True RLAQHITYV 30.587997 367.545214831829 7958879.0 5910.0 nc|ENSG00000166508|P33993-3|MCM7;;ENSG00000166508|ENST00000303887|MCM7 4.975306590398152 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5915 30.594 303.0 203840.0 25 0 12738.0 -1 RPMEVFMC 8 110 514.7226642235509 1027.4307755139016 2 514.7230102419853 MULTI CID FTMS 0 0 0 5910 226969.375 1.0 0 0.0 5 Oxidation (M) _RPMEVFM(Oxidation (M))C_ ENSG00000079332|ENST00000373241|SAR1A;nc|ENSG00000079332|Q9NR31-2|SAR1A 7.910154910731844 0.7763180056447161 5 G[MD]{I|L}[DP]G{I|L} 8 -1 27.184 0.0 0.0 2.6459 0.0 0.0 211.0513403832972 0.0 211.0513403832972 0.0 16.90674783168289 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.0 G[MD]{I|L}[DP]G{I|L} 2.6459 - 147 + 1 2.238 53541.7 1.0 1882 4031 5910 SUDHL4_400M_050219_1,5915 SUDHL4_400M_050219_1,5915,RPMEVFMC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5916 30.607 800.0 263450.0 25 0 25770.0 -1 DMTKMPECYFY 11 139 730.28105514561 1458.54755735802 2 730.2812377810478 MULTI CID FTMS 0 0 0 5910 207823.484375 0.8784120707780431 1 -0.0812263488769531 6 2 Oxidation (M) _DM(Oxidation (M))TKM(Oxidation (M))PECYFY_ ENSG00000160917|ENST00000292476|CPSF4;ENST00000471455.1_1_7:99042440-99051625:+|nuORF;ENST00000484112.5_1_7:99037182-99048419:+|nuORF;nc|ENSG00000160917|O95639-2|CPSF4;nc|ENSG00000160917|O95639-3|CPSF4 7.608950283845883 0.8392484121837455 5 [QA]HDEA 6 -1 45.323 0.0 0.0 3.1074 0.0 0.0 0.0 804.2632915711637 804.2632915711637 23.25134972132595 0.0 0.0 0.0 0 1.805462187404089 0.0 0.0 0.4247425010840047 [QA]HDEA 3.1074 - 465 1 2.238 146871.1 0.8399999737739563 1883 4031 5910 SUDHL4_400M_050219_1,5916 SUDHL4_400M_050219_1,5916,DMTKMPECYFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5917 30.621 800.0 162250.0 25 0 11249.0 1155 AGWFWCERLYC 11 131 717.308285075601 1432.602017218002 2 718.8164550662041 MULTI CID FTMS 0 0 0 5910 188886.296875 1.0 0 0.0 7 Unmodified _AGWFWCERLYC_ ENST00000448841.5_1_10:104573746-104573887:+|nuORF 8.155526934196011 0.8366696279279818 5 YYANQQAEH{M(Oxidation (M))|F}Y 11 10 + 69.756 0.0 0.0 4.8692 4.8692 85.56 0.0 0.0 0.0 40.37208209897792 16.333498159257786 16.333498159257786 9.128498242810991 0 0.0 0.0 0.0 0.805462187404089 YYANQQAEH{M(Oxidation (M))|F}Y;YYANQ[AG]AEH{M(Oxidation (M))|F}Y;YYAN[AG]QAEH{M(Oxidation (M))|F}Y;YYAGGQQAEH{M(Oxidation (M))|F}Y;YY[PS]EQAEH{M(Oxidation (M))|F}Y;YYAN[AG][AG]AEH{M(Oxidation (M))|F}Y;YYAGGQ[AG]AEH{M(Oxidation (M))|F}Y;YYAGG[AG]QAEH{M(Oxidation (M))|F}Y;YYANQ{[NV]|[RG]}DH{M(Oxidation (M))|F}Y;YYAN{[NV]|[RG]}NEH{M(Oxidation (M))|F}Y 4.8692;4.232;4.232;4.232;3.6841;3.5969;3.5969;3.5969;3.5603;3.1044 -;-;-;-;-;-;-;-;-;- 5673 + 1 2.238 93282.4 0.800000011920929 1884 4031 5910 SUDHL4_400M_050219_1,5917 SUDHL4_400M_050219_1,5917,AGWFWCERLYC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5918 30.629 455.0 221490.0 25 0 16404.0 + + -1 SQMKSYQSF 9 146 551.748703188209 1101.482853443218 2 553.2532836794853 MULTI CID FTMS 0 0 0 5910 186800.109375 1.0 0 0.0 8 Oxidation (M) _SQMKM(Oxidation (M))VESF_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 20.453626601364224 0.2830276176381075 5 {[QS]|[NT]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S 6 -1 29.822 0.0 0.0 2.7074 0.0 0.0 0.0 374.1398718360492 374.1398718360492 6.238408666240378 0.0 0.0 0.0 0 0.0 0.744727494896694 0.7396518287104438 0.5796896906561032 {[QS]|[NT]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S 2.7074 - 1264 1 2.238 76899.5 1.0 1885 4031 5910 SUDHL4_400M_050219_1,5918 SUDHL4_400M_050219_1,5918,SQMKMVESF False False SQMKSYQSF 30.62929 553.253283679485 1231950.0 5910.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 7.184332211812337 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5919 30.632 161.0 729600.0 25 0 115330.0 + 11919 GLYVPSLAPH 10 94 527.2901059190239 1052.5656589048476 2 527.2903320193291 MULTI CID FTMS 0 0 0 5910 188944.21875 0.1998514356068253 -2 0.0949554443359375 9 Unmodified _GLYVPSLAPH_ REV__ENSG00000183161|ENST00000327470|FANCF 20.453626601364224 0.5043500229302764 5 {[VA]|[{I|L}G]}YPV 5 -1 42.377 0.0 0.0 4.0261 0.0 0.0 0.0 520.2522677057249 520.2522677057249 27.77310937020445 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}YPV 4.0261 - 92 + 1 2.238 95719.0 1.0 1886 4031 5910 SUDHL4_400M_050219_1,5919 SUDHL4_400M_050219_1,5919,GLYVPSLAPH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5920 30.647 800.0 139210.0 25 0 19050.0 + 20921 LNDLQDKMQF 10 124 634.3025182095557 1266.5904834859114 2 634.3026000857353 MULTI CID FTMS 0 0 0 5910 148123.234375 1.0 0 0.0 10 Oxidation (M) _LNDLQDKM(Oxidation (M))QF_ REV__ENSG00000136634|ENST00000423557|IL10 43.85829265575387 0.1168243637355526 5 QP{I|L}AEEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 75.477 0.0 0.0 5.9591 0.0 0.0 88.05322463203281 0.0 88.05322463203281 0.0 55.87278203619686 0.0 0.0 0 0.8737125054200234 0.0 1.1549471895720984 1.4802046884880935 QP{I|L}AEEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 5.9591 - 878 1 2.238 86202.6 0.7300000190734863 1887 4031 5910 SUDHL4_400M_050219_1,5920 SUDHL4_400M_050219_1,5920,LNDLQDKMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5921 30.652 223.0 291660.0 25 0 34045.0 43682 YAVLRDAD 8 78 461.7347051512244 921.4548573692488 2 461.7351562380791 MULTI CID FTMS 0 0 0 5910 144714.203125 0.7293171229071044 -1 0.0852775573730468 11 Unmodified _YAVLRDAD_ ENSG00000100151|ENST00000356976|PICK1 19.256988751693697 0.6264283240490721 5 YAVE{I|L} 5 5 62.519 0.0 0.0 6.7848 0.0 0.0 0.0 343.1373385065063 343.1373385065063 48.53984580245776 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 YAVE{I|L} 6.7848 - 104 + 1 2.238 54891.1 1.0 1888 4031 5910 SUDHL4_400M_050219_1,5921 SUDHL4_400M_050219_1,5921,YAVLRDAD False True YAVEGRDL 30.651675 461.735156238079 980148.5625 5910.0 ENSG00000163479|ENST00000295702|SSR2;;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;;ENST00000532074.5_1_1:155984857-155990687:-|nuORF;;ENST00000472898.5_1_1:155981561-155990687:-|nuORF 1.1740103363990784 2.0 False 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5923 30.656 32.0 1637400.0 25 0 116890.0 + + -1 RMQKEITAL 9 77 545.3079163559306 1088.6012797786611 2 545.3082153201103 MULTI CID FTMS 0 0 0 5922 1634033.0 0.5645624988123351 1 -0.0572338104248046 1 Oxidation (M) _LM(Oxidation (M))ALPMLTLA_ ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000107796|ENST00000224784|ACTA2;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000159251|ENST00000290378|ACTC1;nc|ENSG00000204434|Q9BYX7|POTEKP;ENSG00000143632|ENST00000366684|ACTA1;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB 30.63653989081413 0.2803493085145199 5 [TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KETA{I|L}{I|L} 10 -1 + 60.988 0.0 0.0 5.6024 5.6024 82.621 0.0 0.0 0.0 13.00695407970916 15.026975159433531 13.00695407970916 2.838096733120281 0 0.3494850021680094 1.3010299956639813 0.9076960356474644 0.0 [TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KETA{I|L}{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KEAT{I|L}{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KTEA{I|L}{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KE{I|L}TA{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}KT{I|L}AE{I|L};{[WT]|[RM]}QKETA{I|L}{I|L};{[WT]|[RM]}QKEAT{I|L}{I|L};{[WT]|[RM]}QKTEA{I|L}{I|L};{[WT]|[RM]}QKE{I|L}TA{I|L};[TA]{[QD]|[EN]|[WG]|[KD]|[RS]}K[WD]{I|L}{I|L} 5.6024;5.3417;5.3259;5.1273;4.6956;4.4076;4.1469;4.1311;3.9325;3.8488 -;-;-;-;-;-;-;-;-;- 720 1 2.238 45639.4 1.0 1889 4032 5922 SUDHL4_400M_050219_1,5923 SUDHL4_400M_050219_1,5923,LMALPMLTLA False False RMQKEITAL 30.656259 545.30821532011 15248543.0 5922.0 ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000163017|ENST00000345517|ACTG2;;ENSG00000107796|ENST00000224784|ACTA2;;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;ENSG00000159251|ENST00000290378|ACTC1;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENSG00000075624|ENST00000646664|ACTB 5.418546835581462 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5924 30.657 38.0 1171900.0 25 0 173240.0 + 8946 FAMNDESVFY 10 63 611.7601677875299 1221.5057826418597 2 611.7601196169853 MULTI CID FTMS 0 0 0 5922 1161618.5 0.4054406575182198 2 -0.0809993743896484 2 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 19.256988751693697 0.5244284437930726 5 [HD]{[CP]|[EA]}QQNA{M(Oxidation (M))|F}Y 10 -1 + 65.635 0.0 0.0 5.3733 5.3733 87.522 0.0 0.0 0.0 2.98332479720628 58.64516253185087 2.98332479720628 9.164539485499256 0 1.0 0.0 0.3494850021680094 0.8494850021680094 [HD]{[CP]|[EA]}QQNA{M(Oxidation (M))|F}Y;[HD]{[CP]|[EA]}[AG]QNA{M(Oxidation (M))|F}Y;[HD]{[CP]|[EA]}Q[AG]NA{M(Oxidation (M))|F}Y;[HD]{[CP]|[EA]}QQGGA{M(Oxidation (M))|F}Y;[{M(Oxidation (M))|F}E][MD][VS]NA{M(Oxidation (M))|F}Y 5.3733;4.623;4.623;4.623;3.9031 -;-;-;-;- 145 1 2.238 38284.1 1.0 1890 4032 5922 SUDHL4_400M_050219_1,5924 SUDHL4_400M_050219_1,5924,FAMNDESVFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5925 30.664 366.0 240750.0 25 0 24547.0 + -1 ICFNTDEAAFY 11 119 675.7892150325297 1349.5638771318593 2 675.7899658083916 MULTI CID FTMS 0 0 0 5922 355367.625 0.273577073784681 2 -0.0809993743896484 3 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FNTDEAAFY_ REV__ENSG00000163746|ENST00000696113|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7-3|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7|PLSCR2 22.736283301280096 0.5583477779825423 5 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y 11 -1 + 75.794 0.0 0.0 5.6162 5.6162 87.848 0.0 0.0 0.0 1.8387136698128188 47.04651500099455 1.8387136698128188 9.128498242810991 0 0.8935078169319297 0.0 1.4604093769761874 2.504432191740108 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]N[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]GGQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQQGGA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQQNY{[MS]|[{M(Oxidation (M))|F}A]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]AQQGGA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]AQ[AG]NA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]A[AG]QNA{M(Oxidation (M))|F}Y 5.6162;4.9398;4.9398;4.9398;4.9398;4.7773;4.3247;4.1009;4.1009;4.1009 -;-;-;-;-;-;-;-;-;- 2784 1 2.238 69413.7 1.0 1891 4032 5922 SUDHL4_400M_050219_1,5925 SUDHL4_400M_050219_1,5925,ICFNTDEAAFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5926 30.668 229.0 302060.0 25 0 28829.0 + 11281 GEVDVEQHTL 10 109 563.7726679382074 1125.5307829432147 2 563.7725707888603 MULTI CID FTMS 0 0 0 5922 275948.6875 0.2996507835567276 -3 0.1761817932128906 4 Unmodified _GEVDVEQHTL_ ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1 93.16586880292088 0.0091067182461363 5 {[DA]|[EG]}VDVEQH[{I|L}T] 10 0 + 95.2 0.0 0.0 8.4582 8.4582 96.348 0.0 0.0 0.0 55.79612393459058 2.653631197717985 2.653631197717985 12.65938950717934 0 1.3807196863200843 1.6989700043360187 2.504432191740108 0.3494850021680094 + + {[DA]|[EG]}VDVEQH[{I|L}T];{[DA]|[EG]}VDVE[AG]H[{I|L}T];{[DA]|[EG]}VDV{M(Oxidation (M))|F}[RH][PA];{[DA]|[EG]}VDYT{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[PA];{[DA]|[EG]}VD[{I|L}A][DG]H[{I|L}T];WVDYT[QT][{I|L}T];{[DA]|[EG]}V[MT]E[RH][PA];{[DA]|[EG]}V[{M(Oxidation (M))|F}V]D[RH][PA];{[DA]|[EG]}V[HA]TD{I|L}V{[DA]|[EG]};{[DA]|[EG]}V[HA]SE{I|L}V{[DA]|[EG]} 8.4582;7.3335;6.3941;5.1122;4.5592;4.194;4.0442;3.7259;3.6596;3.5298 +;-;-;-;-;-;-;-;-;- + 1819 + 1 2.238 60345.2 1.0 1892 4032 5922 SUDHL4_400M_050219_1,5926 SUDHL4_400M_050219_1,5926,GEVDVEQHTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5927 30.671 149.0 372960.0 25 0 43101.0 + 10176 FQAPTAKEM 9 85 511.7522806954409 1021.4900084576818 2 511.7531616091728 MULTI CID FTMS 0 0 0 5922 255532.390625 0.573153938423341 -2 0.16650390625 5 Unmodified _FQAPTAKEM_ ENSG00000125637|ENST00000245796|PSD4;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;ENST00000418251.6_1_2:113943320-113958989:+|nuORF;nc|ENSG00000125637|Q8NDX1-2|PSD4 23.78978130925829 0.2284941198415988 5 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}APTA[QP]Y 9 3 + 29.899 0.0 0.0 2.927 2.927 77.966 0.0 0.0 0.0 17.134972204866198 1.082268588648251 1.082268588648251 4.973246408079497 0 1.0 0.0 0.4247425010840047 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}APTA[QP]Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}APTAH[PG]P;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}APTHA[PG]P;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[R{M(Oxidation (M))|F}]PA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}APTH[QP]P;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}APTA[YQ]P;[KA][TP]{M(Oxidation (M))|F}MA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[QA]VV{M(Oxidation (M))|F}MA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[QA]VVA{M(Oxidation (M))|F}M{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[QA]VVE[YG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.927;2.4402;2.4402;2.3634;2.2678;2.2678;2.259;2.2546;1.3468;1.0352 -;-;-;-;-;-;-;-;-;- 269 + 1 2.238 47711.9 1.0 1893 4032 5922 SUDHL4_400M_050219_1,5927 SUDHL4_400M_050219_1,5927,FQAPTAKEM False True FQAPTAKEM 30.67134 511.753161609173 2606389.0 5922.0 nc|ENSG00000125637|Q8NDX1-2|PSD4;;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;;ENSG00000125637|ENST00000245796|PSD4;;ENST00000418251.6_1_2:113943320-113958989:+|nuORF 7.301071325937907 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5928 30.675 213.0 382920.0 25 0 81947.0 + 12624 GVKNPIGAV 9 85 427.7584199537727 853.5022869743455 2 427.7583495974541 MULTI CID FTMS 0 0 0 5922 175885.3125 0.1474478710121592 2 -0.0809993743896484 6 Unmodified _GVKNPIGAV_ REV__ENSG00000189079|ENST00000334344|ARID2;REV__nc|ENSG00000189079|Q68CP9-3|ARID2 13.50788311687929 0.4710407108020397 5 PAV 3 -1 14.385 0.0 0.0 1.6855 0.0 0.0 568.3326720113645 0.0 568.3326720113645 0.0 3.6721376912844086 0.0 0.0 0 0.5 0.0 0.0 0.0 PAV 1.6855 - 44 + 1 2.238 72113.7 1.0 1894 4032 5922 SUDHL4_400M_050219_1,5928 SUDHL4_400M_050219_1,5928,GVKNPIGAV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5929 30.689 800.0 223560.0 25 0 16617.0 + -1 YEKFCCLCQRQ 11 123 796.3425118870481 1590.670470840896 2 796.3426391482353 MULTI CID FTMS 0 0 0 5922 127525.828125 0.2787360500541342 -4 0.2132301330566406 7 3 Carbamidomethyl (C) _YEKFC(Carbamidomethyl (C))C(Carbamidomethyl (C))LC(Carbamidomethyl (C))QRQ_ REV__ENSG00000115464|ENST00000398571|USP34 8.155526934196011 0.8366696279279818 5 HDEAQQNA{M(Oxidation (M))|F}YQ 11 -1 115.92 0.0 0.0 7.2877 0.0 0.0 241.1058827130875 0.0 241.1058827130875 0.0 84.57040395414776 0.0 0.0 0 0.9247425010840048 0.0 1.8169015600442573 1.6549471895720984 HDEAQQNA{M(Oxidation (M))|F}YQ 7.2877 - 8084 1 2.238 125400.0 0.6399999856948853 1895 4032 5922 SUDHL4_400M_050219_1,5929 SUDHL4_400M_050219_1,5929,YEKFCCLCQRQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5930 30.694 250.0 226320.0 25 0 21035.0 + 30054 QVADIDGQYA 10 99 540.252856201581 1078.491159469962 2 540.2534057497978 MULTI CID FTMS 0 0 0 5922 123851.8671875 0.8279593664259307 -2 0.16650390625 8 Unmodified _QVADIDGQYA_ ENSG00000168036|ENST00000349496|CTNNB1 15.738622578938676 0.5834632108994704 5 {[QG]|[NA]}D{I|L}{I|L} 5 7 13.968 0.0 0.0 1.2952 0.0 0.0 0.0 549.192062140137 549.192062140137 1.2042115435888476 0.0 0.0 0.0 0 0.0 0.0 0.6203715150305281 0.5 {[QG]|[NA]}D{I|L}{I|L} 1.2952 - 86 1 2.238 50826.8 1.0 1896 4032 5922 SUDHL4_400M_050219_1,5930 SUDHL4_400M_050219_1,5930,QVADIDGQYA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5931 30.708 800.0 142960.0 25 0 8360.9 + -1 CKGWQKDVCFY 11 105 745.8310178470974 1489.6474827609948 2 745.8300659060478 MULTI CID FTMS 0 0 0 5922 86979.9765625 0.6061145537129361 -4 0.2132301330566406 9 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))KGWQKDVC(Carbamidomethyl (C))FY_ REV__ENST00000375640.7_1_6:31802385-31802835:+|nuORF 10.799506525563784 0.8105043987015127 5 {[DA]|[EG]}{M(Oxidation (M))|F}[VS]EAQQDA{M(Oxidation (M))|F}Y 13 -1 + 77.268 0.0 0.0 5.187 5.187 82.427 0.0 0.0 0.0 0.5227545353567393 54.31814138253837 0.5227545353567393 3.732623817562782 0 1.524227503252014 1.154901959985743 0.0 1.274227503252014 {[DA]|[EG]}{M(Oxidation (M))|F}[VS]EAQQDA{M(Oxidation (M))|F}Y;[PG]{I|L}HDEAQQDA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}[VS]DEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{M(Oxidation (M))|F}[VS]EAQ[AG]DA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{M(Oxidation (M))|F}[VS]EA[AG]QDA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}D[VS]EAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{M(Oxidation (M))|F}[VS]EAQQW{M(Oxidation (M))|F}Y;[KP]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQDA{M(Oxidation (M))|F}Y;[PG]{I|L}HDEAQ[AG]DA{M(Oxidation (M))|F}Y;[PG]{I|L}HDEA[AG]QDA{M(Oxidation (M))|F}Y 5.187;4.9364;4.7971;4.578;4.578;4.5299;4.456;4.4338;4.3274;4.3274 -;-;-;-;-;-;-;-;-;- 1479 1 2.238 84828.5 0.5699999928474426 1897 4032 5922 SUDHL4_400M_050219_1,5931 SUDHL4_400M_050219_1,5931,CKGWQKDVCFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5932 30.709 18.0 4710200.0 25 0 896660.0 -1 0 82 473.2592027471975 472.2519262805975 1 473.2590209841728 MULTI CID FTMS 0 0 0 5922 3051888.5 0.322018706889384 -3 0.1761817932128906 10 5 V 1 -1 13.495 0.0 0.0 2.8576 0.0 0.0 355.17244890198265 0.0 355.17244890198265 0.0 1.8124123737558744 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.8576 - 5 + 1 2.238 68561.0 1.0 1898 4032 5922 SUDHL4_400M_050219_1,5932 SUDHL4_400M_050219_1,5932, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5934 30.715 204.0 307650.0 25 0 22927.0 + 33582 SINRSPVTV 9 82 486.7772390997949 971.5399252663898 2 486.7774841189384 MULTI CID FTMS 0 0 0 5933 166765.453125 0.1523591003058091 2 -0.0617084503173828 1 Unmodified _SINRSPVTV_ REV__ENSG00000085465|ENST00000369732|OVGP1 22.736283301280096 0.2418982879461534 5 PAVTV 5 -1 50.261 0.0 0.0 5.1733 0.0 0.0 486.2485523908219 0.0 486.2485523908219 0.0 33.605384569831 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.0 PAVTV 5.1733 - 172 1 2.238 52201.5 1.0 1899 4033 5933 SUDHL4_400M_050219_1,5934 SUDHL4_400M_050219_1,5934,SINRSPVTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5935 30.721 318.0 257930.0 25 0 28121.0 + 31338 RMQKEITAL 9 124 363.8747694880103 1088.602479064231 3 363.8741943240166 MULTI CID FTMS 0 0 0 5933 92076.78125 0.1538768497217746 2 -0.0617084503173828 2 Unmodified _RMQKEITAL_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 10.799506525563784 0.5443532743200366 5 YKEAT{I|L}{I|L} 7 5 27.673 0.0 0.0 2.5421 0.0 0.0 252.1477833478532 0.0 252.1477833478532 0.0 7.54968294217274 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.0 YKEAT{I|L}{I|L} 2.5421 - 237 1 2.238 68856.9 1.0 1900 4033 5933 SUDHL4_400M_050219_1,5935 SUDHL4_400M_050219_1,5935,RMQKEITAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5936 30.723 77.0 703830.0 25 0 50089.0 + -1 TAADFCIFGT 10 88 551.748703188209 1101.482853443218 2 551.7493163943291 MULTI CID FTMS 0 0 0 5933 605561.0625 0.7997293509374908 -1 0.0572338104248046 3 Carbamidomethyl (C) _TAADFC(Carbamidomethyl (C))IFGT_ REV__ENSG00000147481|ENST00000642720|SNTG1;REV__ENST00000524004.5_3_8:51571197-51621559:+|nuORF;REV__nc|ENSG00000147481|Q9NSN8-2|SNTG1 24.020572477871973 0.4289996903560794 5 [TA]ADY{I|L} 6 -1 51.387 0.0 0.0 4.6653 0.0 0.0 0.0 464.1653984493581 464.1653984493581 33.8076491590644 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 [TA]ADY{I|L} 4.6653 - 186 + 1 2.238 48321.8 1.0 1901 4033 5933 SUDHL4_400M_050219_1,5936 SUDHL4_400M_050219_1,5936,TAADFCIFGT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5937 30.728 274.0 201930.0 25 0 19110.0 37539 TLHPVWSQQ 9 80 548.2829799657695 1094.551406998339 2 548.2828857302666 MULTI CID FTMS 0 0 0 5933 139668.015625 0.0928327231690127 62 -2.4174728393554688 4 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 11.517880264261096 0.5249077435482886 5 EHPPEH[HK] 8 7 41.833 0.0 0.0 3.8219 0.0 0.0 85.08984572578281 0.0 85.08984572578281 0.0 29.843050114734808 0.0 0.0 0 2.017220322351953 0.0 0.7302046884880937 0.0 EHPPEH[HK] 3.8219 - 262 1 2.238 46921.4 1.0 1902 4033 5933 SUDHL4_400M_050219_1,5937 SUDHL4_400M_050219_1,5937,TLHPVWSQQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5938 30.733 265.0 266170.0 25 0 25491.0 + -1 RQPDSGISSI 10 104 530.2778651535402 1058.5411773738804 2 530.2762328982353 MULTI CID FTMS 0 0 0 5933 226608.28125 0.4086784757084377 2 -0.0617084503173828 5 Carbamidomethyl (C) _AANLC(Carbamidomethyl (C))IPTSI_ ENSG00000163902|ENST00000296255|RPN1 34.40172386719151 0.2166836008404837 5 H{I|L}EE{I|L}SS{I|L} 8 -1 57.332 0.0 0.0 5.4161 0.0 0.0 132.0789967267594 0.0 132.0789967267594 0.0 42.72791930092417 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 H{I|L}EE{I|L}SS{I|L} 5.4161 - 223 1 2.238 61463.7 1.0 1903 4033 5933 SUDHL4_400M_050219_1,5938 SUDHL4_400M_050219_1,5938,AANLCIPTSI False False RQPDSGISSI 30.732683 530.276232898235 3291469.25 5933.0 ENSG00000163902|ENST00000296255|RPN1 5.268618106842041 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5940 30.738 128.0 590930.0 25 0 84520.0 + 19732 LGPPRLAPG 9 81 439.2665232806816 876.5184936281631 2 439.2679321169853 MULTI CID FTMS 0 0 0 5939 235311.75 0.0357664637974974 84 -2.8543052673339844 1 Unmodified _LGPPRLAPG_ REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF 16.942295170755138 0.3780752226737986 5 {[VA]|[{I|L}G]}PP[R{I|L}][QP] 8 -1 + 39.052 0.0 0.0 4.4554 4.4554 88.362 0.0 0.0 0.0 35.12653100774181 0.9421249706470292 0.9421249706470292 22.73001272063737 0 0.2396518287104437 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}PP[R{I|L}][QP];{[VA]|[{I|L}G]}[HK]VV[QP];{[VA]|[{I|L}G]}[HK][KT]{[HG]|PP};[R{I|L}][PA][VP][QP] 4.4554;1.8621;1.0647;0.10441 -;-;-;- 61 + 1 2.238 64141.6 1.0 1904 4034 5939 SUDHL4_400M_050219_1,5940 SUDHL4_400M_050219_1,5940,LGPPRLAPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5941 30.751 800.0 159380.0 25 0 14926.0 + -1 LDQCMELFY 9 134 617.760326049239 1233.506099165278 2 617.7603027224541 MULTI CID FTMS 0 0 0 5939 96924.65625 0.5416012094220016 -2 0.0809993743896484 2 Carbamidomethyl (C),Oxidation (M) _LDQC(Carbamidomethyl (C))M(Oxidation (M))ELFY_ REV__ENSG00000133477|ENST00000333407|FAM83F;REV__nc|ENSG00000133477|Q8NEG4-2|FAM83F 15.847184025352805 0.4077185912009129 5 EAQQNA{M(Oxidation (M))|F}Y 8 -1 58.525 0.0 0.0 4.7446 0.0 0.0 264.0856190412125 0.0 264.0856190412125 0.0 39.57097374553019 0.0 0.0 0 0.5 0.0 0.0 0.805462187404089 EAQQNA{M(Oxidation (M))|F}Y 4.7446 - 719 1 2.238 96541.5 0.6000000238418579 1905 4034 5939 SUDHL4_400M_050219_1,5941 SUDHL4_400M_050219_1,5941,LDQCMELFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5942 30.757 291.0 264450.0 25 0 11681.0 + 41909 VQFIGRESKY 10 102 409.55577620315154 1225.6454992096546 3 409.5558654665947 MULTI CID FTMS 0 0 0 5939 133188.109375 0.7047661702541587 -1 0.0237655639648437 3 Unmodified _VQFIGRESKY_ ENSG00000109919|ENST00000302503|MTCH2 17.86316937532769 0.5478153791579383 5 [{I|L}V]P{[YC]|[HE]}Y{I|L}{M(Oxidation (M))|F} 8 7 26.609 0.0 0.0 2.171 0.0 0.0 0.0 224.10302538565463 224.10302538565463 11.124497086336127 0.0 0.0 0.0 0 0.3807196863200844 0.744727494896694 0.5 0.0 [{I|L}V]P{[YC]|[HE]}Y{I|L}{M(Oxidation (M))|F} 2.171 - 253 1 2.238 64994.5 1.0 1906 4034 5939 SUDHL4_400M_050219_1,5942 SUDHL4_400M_050219_1,5942,VQFIGRESKY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5943 30.771 800.0 106510.0 25 0 4573.6 + -1 ASTDYSTYSQAAA 13 135 689.2943463795451 1376.57413982589 2 689.2938720583916 MULTI CID FTMS 0 0 0 5939 126736.5078125 0.9228123310500248 1 -0.037942886352539 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))RMCHLQFPGE_ nc|ENSG00000182944|Q01844-6|EWSR1;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-2|EWSR1;ENSG00000182944|ENST00000397938|EWSR1 4.897010918128616 0.8520435188433833 5 {[CP]|[EA]}TDY 5 -1 19.654 0.0 0.0 1.4277 0.0 0.0 0.0 794.3315480065625 794.3315480065625 1.8145863307369936 0.0 0.0 0.0 0 0.0 0.0 1.424742501084005 0.0 {[CP]|[EA]}TDY 1.4277 - 1730 1 2.238 63204.6 0.6700000166893005 1907 4034 5939 SUDHL4_400M_050219_1,5943 SUDHL4_400M_050219_1,5943,CRMCHLQFPGE False False ASTDYSTYSQAAA 30.770635 689.293872058392 917306.4375 5939.0 nc|ENSG00000182944|Q01844-6|EWSR1;;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;;nc|ENSG00000182944|Q01844-5|EWSR1;;nc|ENSG00000182944|Q01844-4|EWSR1;;nc|ENSG00000182944|Q01844-3|EWSR1;;nc|ENSG00000182944|Q01844-2|EWSR1;;ENSG00000182944|ENST00000397938|EWSR1 6.319203058878581 2.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5945 30.775 20.0 1863900.0 25 0 227210.0 8641 EVEEDEYKAFY 11 59 711.3075970249783 1420.6006411167566 2 711.3082153201103 MULTI CID FTMS 0 0 0 5944 2510400.5 0.0932587815510807 5 -0.16583251953125 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 8.155526934196011 0.8366696279279818 5 [QA]HDEAQQNA{M(Oxidation (M))|F}Y 12 8 + 60.315 0.0 0.0 4.2457 4.2457 80.601 0.0 0.0 0.0 3.221784748895651 43.32518552866858 3.221784748895651 4.771212547196626 0 0.8935078169319297 0.0 0.0 0.4247425010840047 [QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QNA{M(Oxidation (M))|F}Y;[QA]HDEAQN[AG]A{M(Oxidation (M))|F}Y;[QA]HDEAQGGQA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]NQA{M(Oxidation (M))|F}Y;[QA]E[HD]AQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]GGA{M(Oxidation (M))|F}Y 4.2457;3.9099;3.6053;3.6053;3.6053;3.2694;3.2694;3.2694;3.2096;2.9666 -;-;-;-;-;-;-;-;-;- 497 1 2.232 33943.2 1.0 1908 4035 5944 SUDHL4_400M_050219_1,5945 SUDHL4_400M_050219_1,5945,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5946 30.776 43.0 1499700.0 25 0 190550.0 + 25839 NLDPAVHEV 9 81 497.2535599548003 992.4925669764008 2 497.2536804080009 MULTI CID FTMS 0 0 0 5944 1395090.875 0.981153756382908 -1 0.037942886352539 2 Unmodified _NLDPAVHEV_ ENSG00000198522|ENST00000610189|GPN1;ENST00000461249.1_1_2:27852141-27855513:+|nuORF;ENST00000478484.5_1_2:27851925-27854072:+|nuORF;ENST00000503738.5_1_2:27851561-27855513:+|nuORF;nc|ENSG00000198522|Q9HCN4-4|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1 52.268347100219714 0.0353964759249114 5 {[QV]|[N{I|L}]|[RA]|[KV]}DPAV 6 3 47.88 0.0 0.0 4.8243 0.0 0.0 0.0 380.1580708795664 380.1580708795664 30.747942838938723 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}DPAV 4.8243 + + 254 + 1 2.232 56087.3 1.0 1909 4035 5944 SUDHL4_400M_050219_1,5946 SUDHL4_400M_050219_1,5946,NLDPAVHEV True True NLDPAVHEV 30.776406 497.253680408001 7817478.0 5944.0 ENSG00000198522|ENST00000610189|GPN1;;ENST00000503738.5_1_2:27851561-27855513:+|nuORF;;ENST00000478484.5_1_2:27851925-27854072:+|nuORF;;nc|ENSG00000198522|Q9HCN4-4|GPN1;;ENST00000461249.1_1_2:27852141-27855513:+|nuORF;;nc|ENSG00000198522|Q9HCN4-5|GPN1 7.623216152191162 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5948 30.781 120.0 843260.0 25 0 292070.0 + 32036 RVITALVER 9 81 528.8296659506076 1055.644778968015 2 528.8298828005791 MULTI CID FTMS 0 0 0 5947 599288.4375 0.992144063984842 1 -0.0974311828613281 1 Unmodified _RVITALVER_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 15.738622578938676 0.4106572216562794 5 {I|L}VER 4 5 34.553 0.0 0.0 3.2731 0.0 0.0 540.3405018537125 0.0 540.3405018537125 0.0 15.612431371158737 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}VER 3.2731 + + 59 1 2.232 81905.9 1.0 1910 4036 5947 SUDHL4_400M_050219_1,5948 SUDHL4_400M_050219_1,5948,RVITALVER False True RVITALVER 30.781243 528.8307 2981132.25 5947.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 6.056552092234294 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5949 30.784 143.0 504560.0 25 0 44419.0 + 25766 NIVERVKEV 9 108 543.3199803357836 1084.6254077383671 2 543.3202392458916 MULTI CID FTMS 0 0 0 5947 241389.28125 1.0 0 0.0 2 Unmodified _NIVERVKEV_ ENSG00000132274|ENST00000379965|TRIM22;ENST00000460454.1_1_11:5717462-5717939:+|nuORF;nc|ENSG00000132274|Q8IYM9-2|TRIM22 24.99096001346401 0.2132109383330889 5 EV 2 7 21.326 0.0 0.0 1.9662 0.0 0.0 838.4983111591202 0.0 838.4983111591202 0.0 3.36696871556164 0.0 0.0 0 0.1861818737241735 0.0 0.0 0.0 + EV 1.9662 + + 28 1 2.232 64243.2 1.0 1911 4036 5947 SUDHL4_400M_050219_1,5949 SUDHL4_400M_050219_1,5949,NIVERVKEV False True NIVERVKEV 30.784127 543.320239245892 1068262.25 5947.0 ENST00000460454.1_1_11:5717462-5717939:+|nuORF;;nc|ENSG00000132274|Q8IYM9-2|TRIM22;;ENSG00000132274|ENST00000379965|TRIM22 3.6564573446909594 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5950 30.787 166.0 301690.0 25 0 19974.0 + 34011 SLITETASI 9 80 467.7591031667558 933.5036534003116 2 467.7592651247978 MULTI CID FTMS 0 0 0 5947 265485.6875 0.4749759815581304 -6 0.2912406921386719 3 Unmodified _SLITETASI_ REV__ENSG00000188738|ENST00000424728|FSIP2;REV__nc|ENSG00000188738|Q5CZC0-2|FSIP2 32.30548876998284 0.1201446275138228 5 S[VP]RT{M(Oxidation (M))|F}P 7 -1 39.218 0.0 0.0 4.2012 0.0 0.0 131.09497267890782 0.0 131.09497267890782 0.0 28.839300566139165 0.0 0.0 0 1.805462187404089 0.0 0.2614393726401688 0.0 S[VP]RT{M(Oxidation (M))|F}P 4.2012 - 116 1 2.232 42150.0 1.0 1912 4036 5947 SUDHL4_400M_050219_1,5950 SUDHL4_400M_050219_1,5950,SLITETASI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5951 30.792 227.0 273820.0 25 0 48438.0 + 8026 RLGSVNENL 9 90 501.2722033670838 1000.5298538009675 2 501.2720519900322 MULTI CID FTMS 0 0 0 5947 193234.921875 0.5830178923333482 -2 0.0437374114990234 4 Unmodified _ENEKRVLN_ nc|ENSG00000132199|Q7L5Y1-4|ENOSF1;nc|ENSG00000132199|Q7L5Y1-7|ENOSF1;nc|ENSG00000132199|Q7L5Y1-2|ENOSF1;nc|ENSG00000132199|Q7L5Y1-6|ENOSF1;ENSG00000132199|ENST00000647584|ENOSF1;nc|ENSG00000132199|Q7L5Y1-5|ENOSF1;ENST00000583973.5_1_18:674307-686832:-|nuORF 25.399314129420983 0.5099049743284904 5 VNEN{I|L} 5 5 32.449 0.0 0.0 3.2431 0.0 0.0 413.2383258461601 0.0 413.2383258461601 0.0 19.97425010840047 0.0 0.0 0 0.75 0.0 0.0 0.0 VNEN{I|L} 3.2431 - 205 1 2.232 54761.1 1.0 1913 4036 5947 SUDHL4_400M_050219_1,5951 SUDHL4_400M_050219_1,5951,ENEKRVLN False False RLGSVNENL 30.791648 501.272051990032 1443298.75 5947.0 nc|ENSG00000132199|Q7L5Y1-4|ENOSF1;;nc|ENSG00000132199|Q7L5Y1-7|ENOSF1;;nc|ENSG00000132199|Q7L5Y1-2|ENOSF1;;nc|ENSG00000132199|Q7L5Y1-6|ENOSF1;;ENSG00000132199|ENST00000647584|ENOSF1;;nc|ENSG00000132199|Q7L5Y1-5|ENOSF1;;ENST00000583973.5_1_18:674307-686832:-|nuORF 0.9418970346450806 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5952 30.798 365.0 322020.0 25 0 43738.0 + 42717 VVAPPGVVVSR 11 117 540.332432874376 1078.6503128155518 2 540.3325683474541 MULTI CID FTMS 0 0 0 5947 175515.25 0.6475723967655094 -2 0.0437374114990234 5 Unmodified _VVAPPGVVVSR_ ENSG00000145191|ENST00000648915|EIF2B5;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;ENST00000491144.5_1_3:183853173-183855624:+|nuORF 19.62595529434964 0.626904505265593 5 VVAPPR 6 5 59.798 0.0 0.0 5.5438 0.0 0.0 0.0 456.2571200006469 456.2571200006469 44.39240487828427 0.0 0.0 0.0 0 1.1382104921644451 2.0 0.0 0.0 VVAPPR 5.5438 - 147 + 1 2.232 94037.4 1.0 1914 4036 5947 SUDHL4_400M_050219_1,5952 SUDHL4_400M_050219_1,5952,VVAPPGVVVSR False True VVAPPGVVVSR 30.798233 540.332568347454 3267038.5 5947.0 ENST00000491144.5_1_3:183853173-183855624:+|nuORF;;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;;ENSG00000145191|ENST00000648915|EIF2B5 5.551843802134196 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5953 30.802 179.0 313550.0 25 0 24119.0 -1 CSYTCAKK 8 100 480.71701435598106 959.419475778762 2 480.7175781130791 MULTI CID FTMS 0 0 0 5947 171983.890625 0.4065314763800742 -4 0.1247367858886718 6 Carbamidomethyl (C) _CSYTC(Carbamidomethyl (C))AKK_ ENSG00000010327|ENST00000321725|STAB1 11.640296217721598 0.738950129755968 5 [HT]GP{I|L}T 6 -1 40.835 0.0 0.0 4.2562 0.0 0.0 0.0 350.0808276676872 350.0808276676872 25.26201571102888 0.0 0.0 0.0 0 0.7887254899964358 0.7695510786217261 0.8252574989159953 0.0 [HT]GP{I|L}T 4.2562 - 206 1 2.232 49099.4 1.0 1915 4036 5947 SUDHL4_400M_050219_1,5953 SUDHL4_400M_050219_1,5953,CSYTCAKK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5954 30.816 800.0 150140.0 25 0 11269.0 + 41910 VQFIGRESKY 10 114 613.8311440607363 1225.6477351882725 2 613.8330566287041 MULTI CID FTMS 0 0 0 5947 117531.828125 1.0 0 0.0 7 Unmodified _VQFIGRESKY_ ENSG00000109919|ENST00000302503|MTCH2 47.05281240577143 0.0974485010253181 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}[WR]SKY 9 2 + 73.126 0.0 0.0 5.9664 5.9664 88.34 0.0 0.0 0.0 43.21719669609443 13.46787486224656 13.46787486224656 8.653014261025447 0 2.055462187404089 1.2218487496163564 0.3252574989159953 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}[WR]SKY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}[PS]{[SA]|[TG]}SKY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[KQ]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}AV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}QQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}AV;{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))H][{I|L}T]{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}[{I|L}T]SQH[PG];{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))H]AKKE{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}KKASQH[PG];{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}[RN]{M(Oxidation (M))|F}QVY 5.9664;5.2604;2.5138;2.5138;2.3359;2.0434;1.7011;1.4086;1.256 -;-;-;-;-;-;-;-;- 451 + 1 2.232 92262.0 0.6299999952316284 1916 4036 5947 SUDHL4_400M_050219_1,5954 SUDHL4_400M_050219_1,5954,VQFIGRESKY True True VQFIGRESKY 30.815531 613.8323 1595827.3125 5947.0 ENSG00000109919|ENST00000302503|MTCH2 5.037913004557292 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5955 30.829 761.0 213350.0 25 0 28056.0 -1 0 187 465.2627453360792 464.2554688694792 1 465.2608520388603 MULTI CID FTMS 0 0 0 5947 96355.9921875 0.1107778885535675 14 -0.4917659759521484 8 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T 3 -1 24.272 0.0 0.0 5.2281 0.0 0.0 0.0 116.0538752017636 116.0538752017636 10.776892790046231 0.0 0.0 0.0 0 0.1595680409956017 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T 5.2281 - 102 1 2.232 125808.6 1.0 1917 4036 5947 SUDHL4_400M_050219_1,5955 SUDHL4_400M_050219_1,5955, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5956 30.836 384.0 238070.0 25 0 16082.0 + 17382 KMFQVHQV 8 141 508.7706724241893 1015.5267919151788 2 508.7712890505791 MULTI CID FTMS 0 0 0 5947 95796.046875 0.6509073393383089 -2 0.0437374114990234 9 Unmodified _KMFQVHQV_ ENSG00000134882|ENST00000403766|UBAC2;ENST00000480738.1_1_13:99967048-100037586:+|nuORF;nc|ENSG00000134882|Q8NBM4-2|UBAC2;nc|ENSG00000134882|Q8NBM4-3|UBAC2;nc|ENSG00000134882|Q8NBM4-4|UBAC2 53.57557251787612 0.1224291679108181 5 K{M(Oxidation (M))|F}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQV 8 2 + 49.263 0.0 0.0 4.8509 4.8509 82.761 0.0 0.0 0.0 22.3418650613335 12.425588334839958 12.425588334839958 4.9953678497787735 0 1.2614393726401687 0.0 0.0 0.805462187404089 K{M(Oxidation (M))|F}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQV;KEEEVRQV;K[PS]P[HS]HQV;K{M(Oxidation (M))|F}T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H[AG]V;KEEEKS[PA]V;KEEEVR[AG]V;KEEEKSVAP;KEMK[DV][PA]V;KMEK[DV][PA]V;KEMK[DV]VAP 4.8509;4.359;3.6017;3.564;3.1996;3.0721;2.8158;2.6733;2.6582;2.2895 -;-;-;-;-;-;-;-;-;- 708 + 1 2.232 75482.2 1.0 1918 4036 5947 SUDHL4_400M_050219_1,5956 SUDHL4_400M_050219_1,5956,KMFQVHQV True True KMFQVHQV 30.835572 508.771289050579 717232.875 5947.0 nc|ENSG00000134882|Q8NBM4-4|UBAC2;;ENST00000480738.1_1_13:99967048-100037586:+|nuORF;;ENSG00000134882|ENST00000403766|UBAC2;;nc|ENSG00000134882|Q8NBM4-3|UBAC2;;nc|ENSG00000134882|Q8NBM4-2|UBAC2 4.970391432444255 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5957 30.84 218.0 361640.0 25 0 57700.0 + 42642 VTVNDIDPV 9 99 486.255198508216 970.495844083232 2 486.2554809451103 MULTI CID FTMS 0 0 0 5947 168004.53125 0.1528506850573834 128 -4.014856338500977 10 Unmodified _VTVNDIDPV_ REV__ENSG00000123384|ENST00000243077|LRP1 23.1484247019978 0.2366544122328345 5 TV 2 -1 16.058 0.0 0.0 1.6546 0.0 0.0 752.3688584648712 0.0 752.3688584648712 0.0 5.335711019345284 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 TV 1.6546 + + 71 + 1 2.232 65363.6 1.0 1919 4036 5947 SUDHL4_400M_050219_1,5957 SUDHL4_400M_050219_1,5957,VTVNDIDPV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5958 30.855 800.0 28093.0 25 0 5842.8 -1 0 30 1185.8274621939456 3554.460557182037 3 1186.497363269329 MULTI CID FTMS 0 0 0 5947 71610.9453125 0.4362509757843659 4 -0.1600379943847656 11 5 R 1 -1 6.9897 0.0 0.0 0.19665 0.0 0.0 3125.278411041216 270.06242349020494 3395.34083453142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.19665 - 2 + 1 2.232 30973.4 0.449999988079071 1920 4036 5947 SUDHL4_400M_050219_1,5958 SUDHL4_400M_050219_1,5958, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5959 30.86 273.0 197290.0 25 0 38728.0 13915 HVVVPAEEAL 10 75 532.2941564474582 0 532.2932617068291 PEAK CID FTMS 0 0 0 5947 115669.78125 0.9099439138424972 1 -0.0974311828613281 12 Unmodified _HVVVPAEEAL_ ENSG00000265203|ENST00000584701|RBP3 11.640296217721598 0.3623705791714445 5 C 1 10 4.6041 0.0 0.0 0.4333 0.0 0.0 751.4626587427696 205.0837343805297 956.5463931232993 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.4333 - 6 + 1 2.232 48397.5 1.0 1921 4036 5947 SUDHL4_400M_050219_1,5959 SUDHL4_400M_050219_1,5959,HVVVPAEEAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5960 30.874 800.0 195260.0 25 0 21521.0 34511 SNIFYFSY 8 145 520.7416259972697 1039.4686990613393 2 520.7428466677666 MULTI CID FTMS 0 0 0 5947 109266.6171875 1.0 0 0.0 13 Unmodified _SNIFYFSY_ ENST00000512375.1_1_4:84377137-84378237:+|nuORF 13.50788311687929 0.7113601687236069 5 Y 1 7 12.218 0.0 0.0 1.1755 0.0 0.0 858.3939747955175 0.0 858.3939747955175 0.0 1.2368327601384426 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1755 + + 175 + 1 2.232 123767.2 0.5299999713897705 1922 4036 5947 SUDHL4_400M_050219_1,5960 SUDHL4_400M_050219_1,5960,SNIFYFSY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5962 30.878 67.0 624620.0 25 0 56628.0 + 35263 SSFIGKVKS 9 79 476.7768264047742 951.5390998763484 2 476.7766906619072 MULTI CID FTMS 0 0 0 5961 345588.65625 0.0816143875230743 5 -0.1218490600585937 1 Unmodified _SSFIGKVKS_ REV__ENST00000335500.8_1_17:42474164-42474308:-|nuORF 22.736283301280096 0.2418982879461534 5 {[CA]|SS}{M(Oxidation (M))|F}{I|L}SKV[KG] 9 -1 + 34.97 0.0 0.0 3.6751 3.6751 86.836 0.0 0.0 0.0 20.3656123832574 4.762036441594198 4.762036441594198 34.96970615301927 0 0.7059771852360797 0.0 0.3807196863200844 0.0 {[CA]|SS}{M(Oxidation (M))|F}{I|L}SKV[KG] 3.6751 - 73 + 1 2.232 37773.5 1.0 1923 4037 5961 SUDHL4_400M_050219_1,5962 SUDHL4_400M_050219_1,5962,SSFIGKVKS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5963 30.884 325.0 300180.0 25 0 28402.0 + + -1 AAVGAGCGL 9 108 717.308285075601 1432.602017218002 2 718.3141967654228 MULTI CID FTMS 0 0 0 5961 183721.4375 0.5350135735298922 -4 0.1649341583251953 2 2 Carbamidomethyl (C) _ELNEYYGC(Carbamidomethyl (C))LC(Carbamidomethyl (C))I_ ENST00000272342.5_1_2:67624474-67624507:+|nuORF 16.149105407346934 0.6992268271266642 5 {[QG]|[NA]}{M(Oxidation (M))|F}MEAEQNA 10 -1 55.398 0.0 0.0 3.867 0.0 0.0 0.0 324.1170018505158 324.1170018505158 24.52108578550192 0.0 0.0 0.0 0 0.0 0.744727494896694 0.4247425010840047 0.7742275032520141 {[QG]|[NA]}{M(Oxidation (M))|F}MEAEQNA 3.867 - 3565 1 2.232 72948.2 1.0 1924 4037 5961 SUDHL4_400M_050219_1,5963 SUDHL4_400M_050219_1,5963,ELNEYYGCLCI False False AAVGAGCGL 30.884339 718.314196765423 624399.8125 5961.0 ENST00000272342.5_1_2:67624474-67624507:+|nuORF 0.3827349742253621 1.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 5965 30.889 57.0 1107900.0 25 0 106130.0 + -1 TAVTAHFMKK 10 94 575.3078867524722 1148.6012205717443 2 575.3081542849541 MULTI CID FTMS 0 0 0 5964 622099.3125 0.9871538744265416 1 -0.0302028656005859 1 Oxidation (M) _TAVTAHFM(Oxidation (M))KK_ REV__ENSG00000163565|ENST00000295809|IFI16;REV__ENST00000493884.5_1_1:158984458-159022017:+|nuORF;REV__nc|ENSG00000163565|Q16666-2|IFI16;REV__nc|ENSG00000163565|Q16666-3|IFI16;REV__nc|ENSG00000163565|Q16666-6|IFI16;REV__nc|ENSG00000163565|Q16666-8|IFI16 22.736283301280096 0.4578556481593033 5 [TA][KP]{M(Oxidation (M))|F}[{I|L}P]T{M(Oxidation (M))|F}K 10 -1 + 54.345 0.0 0.0 4.7314 4.7314 83.237 0.0 0.0 0.0 5.695990759876111 32.672203223519524 5.695990759876111 6.404243831634986 0 0.9361818737241734 1.0 1.0044321917401078 0.3054621874040891 [TA][KP]{M(Oxidation (M))|F}[{I|L}P]T{M(Oxidation (M))|F}K;[TA]{[TV]|[{I|L}S]}AT[{I|L}P]GV[YG];[KT][PA]{M(Oxidation (M))|F}[{I|L}P]T{M(Oxidation (M))|F}K;{[QD]|[EN]|[WG]|[KD]|[RS]}{[TV]|[{I|L}S]}T[{I|L}P]T{M(Oxidation (M))|F}K;{[TV]|[{I|L}S]}[TA]AT[{I|L}P]GV[YG];[TA]A{[TV]|[{I|L}S]}T[{I|L}P]GV[YG];[TA][KP]C{I|L}{I|L}E{M(Oxidation (M))|F}K;[TA][KP]{M(Oxidation (M))|F}[{I|L}P]R[YG];[TA]A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}E{M(Oxidation (M))|F}K;[KT][DV]T[{I|L}P]GV[YG] 4.7314;4.1738;3.8501;3.5798;3.5362;3.0683;2.9768;2.7253;2.6759;2.3471 -;-;-;-;-;-;-;-;-;- 875 1 2.232 52443.6 1.0 1925 4038 5964 SUDHL4_400M_050219_1,5965 SUDHL4_400M_050219_1,5965,TAVTAHFMKK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5966 30.891 82.0 873050.0 25 0 89782.0 39728 VEKHLNAQL 9 97 351.20130370431536 1050.5820817131462 3 351.2014343142509 MULTI CID FTMS 0 0 0 5964 402833.65625 0.747789698470366 -1 0.0106067657470703 2 Unmodified _VEKHLNAQL_ ENSG00000163635|ENST00000674280|ATXN7;ENST00000474112.5_1_3:63898274-63982174:+|nuORF;ENST00000484668.1_1_3:63973932-63976536:+|nuORF;nc|ENSG00000163635|O15265-2|ATXN7;nc|ENSG00000163635|O15265-3|ATXN7 21.59015148037692 0.2564810811560323 5 [HD][K{I|L}]{I|L}NAQ{I|L} 9 3 + 32.598 0.0 0.0 3.1028 3.1028 80.57 0.0 0.0 0.0 1.712046717774534 18.618187372417346 1.712046717774534 8.578409410397473 0 0.242992819099939 0.0 0.0 1.305462187404089 [HD][K{I|L}]{I|L}NAQ{I|L};{[HG]|PP}[W{I|L}]{I|L}NAQ{I|L};[HD][K{I|L}]{I|L}GGAQ{I|L};{[HG]|PP}[VG][KQ]NAQ{I|L};{[HG]|PP}[W{I|L}]{I|L}GGAQ{I|L} 3.1028;2.2863;2.2263;1.1233;0.52957 -;-;-;-;- 76 1 2.232 62968.4 1.0 1926 4038 5964 SUDHL4_400M_050219_1,5966 SUDHL4_400M_050219_1,5966,VEKHLNAQL False True KLHDINAQL 30.890882 351.201434314251 4894382.0 5964.0 nc|ENSG00000100280|Q10567-2|AP1B1;;nc|ENSG00000100280|Q10567-3|AP1B1;;nc|ENSG00000100280|Q10567-4|AP1B1;;ENSG00000100280|ENST00000357586|AP1B1 4.655137936274211 3.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5967 30.893 91.0 589180.0 25 0 28331.0 + 39729 VEKHLNAQL 9 90 526.2984878384905 1050.5824227437809 2 526.2986938357353 MULTI CID FTMS 0 0 0 5964 521706.40625 1.0 0 0.0 3 Unmodified _VEKHLNAQL_ ENSG00000163635|ENST00000674280|ATXN7;ENST00000474112.5_1_3:63898274-63982174:+|nuORF;ENST00000484668.1_1_3:63973932-63976536:+|nuORF;nc|ENSG00000163635|O15265-2|ATXN7;nc|ENSG00000163635|O15265-3|ATXN7 18.373094154950223 0.3393451798331396 5 {[QN]|[E{I|L}]|[KN]}A[RH]{I|L}Y 7 7 20.863 0.0 0.0 1.9858 0.0 0.0 0.0 165.10095236708085 165.10095236708085 3.481887217291991 0.0 0.0 0.0 0 0.6382104921644451 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}A[RH]{I|L}Y 1.9858 - 427 1 2.232 47380.8 1.0 1927 4038 5964 SUDHL4_400M_050219_1,5967 SUDHL4_400M_050219_1,5967,VEKHLNAQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5968 30.895 88.0 654280.0 25 0 75993.0 33993 SLINSRDQP 9 86 515.2719636024215 1028.5293742716428 2 515.2715331912041 MULTI CID FTMS 0 0 0 5964 406610.34375 0.6442060606864775 -5 0.1755409240722656 4 Unmodified _SLINSRDQP_ ENSG00000091009|ENST00000265271|RBM27 16.149105407346934 0.3995459350917656 5 {[TV]|[{I|L}S]}{I|L} 3 6 34.705 0.0 0.0 3.3742 0.0 0.0 0.0 712.3061532219153 712.3061532219153 23.735899786366232 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[TV]|[{I|L}S]}{I|L} 3.3742 + + 69 + 1 2.232 52382.3 1.0 1928 4038 5964 SUDHL4_400M_050219_1,5968 SUDHL4_400M_050219_1,5968,SLINSRDQP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5969 30.898 147.0 456200.0 25 0 42913.0 + 17061 KLAPPSSTL 9 100 457.2706842995314 912.5268156658628 2 457.2704955935478 MULTI CID FTMS 0 0 0 5964 346863.28125 0.9387515789108676 -1 0.0106067657470703 5 Unmodified _KLAPPSSTL_ ENSG00000120071|ENST00000432791|KANSL1 56.17704186161178 0.0281986971544335 5 [{I|L}A]KP[PS]ST{I|L} 9 2 + 37.755 0.0 0.0 4.1375 4.1375 79.708 0.0 0.0 0.0 4.163661522900902 4.163661522900902 4.163661522900902 4.163661522900902 0 1.6237125054200234 1.3010299956639813 0.8807196863200843 0.25 [{I|L}A]KP[PS]ST{I|L};RRP[RD]T{I|L};[K{I|L}]AP[PS]ST{I|L};[PA]PV[KT]ST{I|L};[PA]PS[K{I|L}]ST{I|L};[PA][K{I|L}][PS]ST{I|L} 4.1375;3.6812;2.8718;0.75356;0.48722;0.27968 -;-;+;-;-;- + 128 1 2.232 59705.1 1.0 1929 4038 5964 SUDHL4_400M_050219_1,5969 SUDHL4_400M_050219_1,5969,KLAPPSSTL True True KLAPPSSTL 30.897774 457.270495593548 1672883.25 5964.0 ENSG00000120071|ENST00000432791|KANSL1 6.929998874664307 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5970 30.905 427.0 274620.0 25 0 28678.0 + -1 LFDEKMYEN 9 109 602.7649014643664 1203.5152499955327 2 602.7656127810478 MULTI CID FTMS 0 0 0 5964 217650.296875 0.9800390900654526 1 -0.0302028656005859 6 Oxidation (M) _LFDEKM(Oxidation (M))YEN_ REV__ENSG00000174238|ENST00000313486|PITPNA 11.640296217721598 0.521594087909532 5 [EC]KK{I|L}{M(Oxidation (M))|F}D{I|L}{M(Oxidation (M))|F} 9 -1 33.849 0.0 0.0 2.8125 0.0 0.0 0.0 76.93306362686909 76.93306362686909 -1.3775283428517753 0.0 -1.3775283428517753 0.0 0 0.0 0.0 1.4517188504113845 0.0 [EC]KK{I|L}{M(Oxidation (M))|F}D{I|L}{M(Oxidation (M))|F} 2.8125 - 1240 1 2.232 86647.0 1.0 1930 4038 5964 SUDHL4_400M_050219_1,5970 SUDHL4_400M_050219_1,5970,LFDEKMYEN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5971 30.914 514.0 244840.0 25 0 29626.0 + 3502 CMSEGFSYF 9 144 535.7006685705403 1069.3867842078805 2 535.7015869021416 MULTI CID FTMS 0 0 0 5964 207509.59375 0.8693427176111985 -1 0.0106067657470703 7 Unmodified _CMSEGFSYF_ REV__ENSG00000185220|ENST00000329291|PGBD2;REV__nc|ENSG00000185220|Q6P3X8-2|PGBD2 11.640296217721598 0.521594087909532 5 [{I|L}A]D[DN]V 6 -1 28.918 0.0 0.0 2.7041 0.0 0.0 0.0 439.0801795538368 439.0801795538368 16.69933211002821 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.6109243748081782 [{I|L}A]D[DN]V 2.7041 - 271 1 2.232 102234.2 1.0 1931 4038 5964 SUDHL4_400M_050219_1,5971 SUDHL4_400M_050219_1,5971,CMSEGFSYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5973 30.922 216.0 321030.0 25 0 47033.0 -1 KTGVCITALK 10 84 545.817652291296 1089.620751649392 2 545.8170654177666 MULTI CID FTMS 0 0 0 5972 166609.75 0.7668801167628627 -2 0.0408096313476562 1 Carbamidomethyl (C) _KTGVC(Carbamidomethyl (C))ITALK_ ENSG00000073331|ENST00000650871|ALPK1;ENST00000504745.1_1_4:113347516-113362363:+|nuORF;nc|ENSG00000073331|Q96QP1-2|ALPK1 8.745405648335112 0.6861838735306406 5 KTT 3 -1 23.729 0.0 0.0 2.1777 0.0 0.0 120.05929478072854 636.3483823520121 756.4076771327407 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 KTT 2.1777 - 70 + 1 2.238 59159.8 1.0 1932 4039 5972 SUDHL4_400M_050219_1,5973 SUDHL4_400M_050219_1,5973,KTGVCITALK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5974 30.936 800.0 109800.0 25 0 10839.0 + 8947 FAMNDESVFY 10 103 611.7601677875299 1221.5057826418597 2 611.7602416872978 MULTI CID FTMS 0 0 0 5972 72316.1953125 0.0252405809452208 9 -0.2993412017822265 2 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 15.847184025352805 0.5816416552707754 5 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 44.759 0.0 0.0 3.6643 3.6643 82.357 0.0 0.0 0.0 4.884381005764311 27.769790682657245 4.884381005764311 9.164539485499247 0 0.8935078169319297 0.0 0.3494850021680094 0.4247425010840047 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YQ]{[C(Carbamidomethyl (C))E]|[WC]}A{M(Oxidation (M))|F}Y 3.6643;2.914;2.914;2.914;2.1667;2.1667;2.1667;1.0474 -;-;-;-;-;-;-;- 251 1 2.238 69574.3 0.5600000023841858 1933 4039 5972 SUDHL4_400M_050219_1,5974 SUDHL4_400M_050219_1,5974,FAMNDESVFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5976 30.953 800.0 189560.0 25 0 11694.0 + + -1 AEAPAGPAL 9 115 796.3425118870481 1590.670470840896 2 796.3420898318291 MULTI CID FTMS 0 0 0 5975 157835.03125 0.3449835520979553 4 -0.1487636566162109 1 Acetyl (Protein N-term),2 Carbamidomethyl (C),2 Oxidation (M) _(Acetyl (Protein N-term))C(Carbamidomethyl (C))RNIM(Oxidation (M))C(Carbamidomethyl (C))LEKM(Oxidation (M))Y_ ENSG00000074356|ENST00000389005|NCBP3 5.296884461304476 0.8501568894076437 5 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}YQ 13 -1 + 109.18 0.0 0.0 6.8635 6.8635 85.454 0.0 0.0 0.0 1.0913162849779496 85.27497920073617 1.0913162849779496 2.3630466602732554 0 1.3494850021680094 0.0 1.372363747448347 1.9731975075880328 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}YQ;[YE][NS]EAQQNA{M(Oxidation (M))|F}YQ;{[QD]|[EN]|[WG]|[KD]|[RS]}{[{M(Oxidation (M))|F}C]|[YS]}EAQQNA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F}YQ;{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F}YQ;[YQ]{[DS]|[MA]|[CV]|TT}EAQQNA{M(Oxidation (M))|F}YQ;{[VA]|[{I|L}G]}[YC(Carbamidomethyl (C))]EAQQNA{M(Oxidation (M))|F}YQ;{[QG]|[NA]}G[HN]EA[AG]QNA{M(Oxidation (M))|F}YQ 6.8635;6.715;6.6911;6.552;6.2932;6.2932;6.2932;6.2517;6.1801;6.146 -;-;-;-;-;-;-;-;-;- 4125 1 2.238 107137.3 0.8100000023841858 1934 4040 5975 SUDHL4_400M_050219_1,5976 SUDHL4_400M_050219_1,5976,CRNIMCLEKMY False False AEAPAGPAL 30.952636 796.342089831829 276505.96875 5975.0 ENSG00000074356|ENST00000389005|NCBP3 3.579094966252645 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5977 30.958 279.0 184570.0 25 0 19621.0 + 11282 GEVDVEQHTL 10 101 563.7726679382074 1125.5307829432147 2 563.7724487185478 MULTI CID FTMS 0 0 0 5975 158010.0625 0.171582041092232 5 -0.1930294036865234 2 Unmodified _GEVDVEQHTL_ ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1 37.07464296494664 0.1884581770199685 5 {[DA]|[EG]}VDVEQ 7 3 55.438 0.0 0.0 4.9255 0.0 0.0 0.0 366.1780835302511 366.1780835302511 29.27440017027358 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.4247425010840047 0.0 + {[DA]|[EG]}VDVEQ 4.9255 + + 208 + 1 2.238 47663.8 1.0 1935 4040 5975 SUDHL4_400M_050219_1,5977 SUDHL4_400M_050219_1,5977,GEVDVEQHTL False True GEVDVEQHTL 30.95778 563.772448718548 8830732.0 5975.0 ENSG00000134057|ENST00000256442|CCNB1;;ENSG00000157456|ENST00000288207|CCNB2;;nc|ENSG00000134057|P14635-2|CCNB1 8.476561705271402 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5978 30.965 386.0 231430.0 25 0 27883.0 + + 43553 AVPYPQRDMPIQA 13 91 751.3798745530864 1500.7451961729728 2 751.3815185427666 MULTI CID FTMS 0 0 0 5975 109243.875 0.7303280612431963 2 -0.0592422485351562 3 Unmodified _WYLFFPHHRAQ_ P02666 5.731851221503515 0.8481046878870278 5 {[VA]|[{I|L}G]}PY 4 -1 36.981 0.0 0.0 2.4642 0.0 0.0 0.0 1067.4949487451363 1067.4949487451363 8.066884185923655 0.0 0.0 0.0 0 0.555462187404089 2.0 0.0 0.0 {[VA]|[{I|L}G]}PY 2.4642 - 459 + 1 2.238 69797.0 1.0 1936 4040 5975 SUDHL4_400M_050219_1,5978 SUDHL4_400M_050219_1,5978,WYLFFPHHRAQ False False AVPYPQRDMPIQA 30.964728 751.381518542767 907803.9375 5975.0 P02666 4.434352000554402 2.0 False 13.0 True unknown PXD020620_cell_line SUDHL4_400M_050219_1 5979 30.968 140.0 380060.0 25 0 77514.0 + + 19816 VTIHPSSSL 9 74 470.25723838938814 0 470.2572204470634 PEAK CID FTMS 0 0 0 5975 125552.1875 0.4827064152422324 -40 0.9834136962890624 4 Unmodified _LGWVHQSL_ nc|ENSG00000162419|Q9Y692|GMEB1;ENSG00000162419|ENST00000373816|GMEB1 15.768221252438446 0.4767174489346095 5 T 1 -1 6.9897 0.0 0.0 0.74477 0.0 0.0 766.3785076852232 68.05130182437733 834.4298095096005 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.74477 - 23 + 1 2.238 49735.5 1.0 1937 4040 5975 SUDHL4_400M_050219_1,5979 SUDHL4_400M_050219_1,5979,LGWVHQSL False False VTIHPSSSL 30.967542 470.257220447063 606445.5625 5975.0 nc|ENSG00000162419|Q9Y692|GMEB1;;ENSG00000162419|ENST00000373816|GMEB1 2.134960698584716 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5980 30.972 213.0 350060.0 25 0 40834.0 -1 0 119 504.3006181124992 503.2933416458992 1 504.3006469607353 MULTI CID FTMS 0 0 0 5975 108673.34375 0.3889498139049888 5 -0.1930294036865234 5 5 {[TV]|[{I|L}S]}A[{I|L}T] 5 -1 + 25.686 0.0 0.0 5.1037 5.1037 90.514 0.0 0.0 0.0 11.082268588648247 2.7545373444029053 2.7545373444029053 25.68636235841012 0 0.0 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}A[{I|L}T] 5.1037 - 35 1 2.238 62164.8 1.0 1938 4040 5975 SUDHL4_400M_050219_1,5980 SUDHL4_400M_050219_1,5980, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5981 30.977 288.0 215800.0 25 0 29965.0 + -1 KCYCEYGPR 9 107 588.2525453157562 0 588.2515746951103 PEAK CID FTMS 0 0 0 5975 106170.96875 0.8608786117222514 2 -0.0592422485351562 6 Carbamidomethyl (C) _KC(Carbamidomethyl (C))YCEYGPR_ REV__ENSG00000049323|ENST00000404816|LTBP1;REV__nc|ENSG00000049323|Q14766-2|LTBP1;REV__nc|ENSG00000049323|Q14766-3|LTBP1;REV__nc|ENSG00000049323|Q14766-4|LTBP1;REV__nc|ENSG00000049323|Q14766-5|LTBP1 7.910154910731844 0.3362437653303669 5 STNG{I|L}W 6 -1 16.357 0.0 0.0 1.3927 0.0 0.0 431.0955156794212 82.06688867740468 513.1624043568258 0.0 0.0 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.3252574989159953 STNG{I|L}W 1.3927 - 69 + 1 2.238 51036.7 1.0 1939 4040 5975 SUDHL4_400M_050219_1,5981 SUDHL4_400M_050219_1,5981,KCYCEYGPR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5983 30.982 34.0 1489400.0 25 0 252880.0 -1 0 65 473.2592027471975 472.2519262805975 1 473.2591735720634 MULTI CID FTMS 0 0 0 5982 1526338.25 0.1610509261858044 6 -0.1984443664550781 1 5 V 1 -1 11.594 0.0 0.0 2.455 0.0 0.0 355.17259386047874 0.0 355.17259386047874 0.0 8.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.455 - 4 + 1 2.238 44152.3 1.0 1940 4041 5982 SUDHL4_400M_050219_1,5983 SUDHL4_400M_050219_1,5983, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5984 30.995 800.0 68627.0 25 0 3546.1 + -1 NEMREERINHT 11 105 722.8336402632287 1443.6527275932574 2 722.8336669802666 MULTI CID FTMS 0 0 0 5982 54838.75390625 0.5154614332528616 1 -0.0186176300048828 2 Oxidation (M) _NEM(Oxidation (M))REERINHT_ REV__ENSG00000181433|ENST00000370709|SAGE1 8.155526934196011 0.8366696279279818 5 [YQ]DTAGYK 8 -1 30.628 0.0 0.0 2.1215 0.0 0.0 0.0 514.2289354392136 514.2289354392136 12.694634427571856 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6549471895720984 [YQ]DTAGYK 2.1215 - 1366 1 2.238 44293.9 0.6200000047683716 1941 4041 5982 SUDHL4_400M_050219_1,5984 SUDHL4_400M_050219_1,5984,NEMREERINHT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5986 31.0 78.0 1140200.0 25 0 104220.0 + 11636 GLAPKPVQV 9 96 454.78189381058206 907.549234687964 2 454.7818176150322 MULTI CID FTMS 0 0 0 5985 909340.1875 0.8603861513566473 -1 0.0186176300048828 1 Unmodified _GLAPKPVQV_ ENSG00000160796|ENST00000450053|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 57.47134341890925 0.0274820932774257 5 {[VA]|[{I|L}G]}APK[VP]QV 9 0 + 58.048 0.0 0.0 6.3961 6.3961 89.37 0.0 0.0 0.0 27.85377573810942 13.46787486224656 13.46787486224656 8.518258296924643 0 1.305462187404089 2.0 0.0 0.5941876774005248 + + {[VA]|[{I|L}G]}APK[VP]QV;{[VA]|[{I|L}G]}GP[KP]{I|L}QV;{[VA]|[{I|L}G]}APK[VP][AG]V;[VP]Q[KP]{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}P[KP]{I|L}QV;[VP][KP]AG{I|L}QV;[VP][KP]Q{I|L}QV;[VP][AG][KP]{I|L}QV;[KP]A[VP]G{I|L}QV;[KP][VP]AG{I|L}QV 6.3961;5.4575;4.7268;2.7358;2.3207;2.1538;1.9657;1.7153;1.6514;1.5446 +;-;-;-;-;-;-;-;-;- + 328 + 1 2.238 75799.0 1.0 1942 4042 5985 SUDHL4_400M_050219_1,5986 SUDHL4_400M_050219_1,5986,GLAPKPVQV True True GLAPKPVQV 31.000275 454.781817615032 4856164.0 5985.0 nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;;ENSG00000160796|ENST00000450053|NBEAL2;;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 7.372560342152913 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5987 31.004 219.0 391910.0 25 0 54966.0 + 19733 LGPPRLAPG 9 78 439.2665232806816 876.5184936281631 2 439.2667114138603 MULTI CID FTMS 0 0 0 5985 235556.78125 0.0358037075872035 92 -3.2182445526123047 2 Unmodified _LGPPRLAPG_ REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF 16.942295170755138 0.3780752226737986 5 {[VA]|[{I|L}G]}PP[R{I|L}][QP] 8 -1 + 39.27 0.0 0.0 4.4802 4.4802 88.398 0.0 0.0 0.0 28.89125264520178 0.9421249706470292 0.9421249706470292 22.73001272063737 0 0.2614393726401688 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}PP[R{I|L}][QP];{[VA]|[{I|L}G]}[HK]VV[QP];{[VA]|[{I|L}G]}[HK][KT]{[HG]|PP} 4.4802;1.887;1.2001 -;-;- 89 + 1 2.238 71450.5 1.0 1943 4042 5985 SUDHL4_400M_050219_1,5987 SUDHL4_400M_050219_1,5987,LGPPRLAPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5988 31.018 800.0 153850.0 25 0 7233.2 + 44222 YLHDQNPDAAL 11 131 628.7990194894064 1255.5834860456127 2 628.7986938357353 MULTI CID FTMS 0 0 0 5985 136883.8125 0.374461841931025 -2 0.0592422485351562 3 Unmodified _YLHDQNPDAAL_ ENSG00000105669|ENST00000262812|COPE;ENST00000597026.5_1_19:19017767-19023834:-|nuORF;nc|ENSG00000105669|O14579-3|COPE 67.83816525789305 0.0386695545555003 5 [DP]AA[KQ]C(Carbamidomethyl (C))ADPA{I|L} 12 8 + 82.581 0.0 0.0 6.5771 6.5771 87.848 0.0 0.0 0.0 13.350972255970746 16.611814434466197 13.350972255970746 5.344406447039063 0 1.3352587893338912 1.0969100130080565 0.5484550065040282 0.8494850021680094 [DP]AA[KQ]C(Carbamidomethyl (C))ADPA{I|L};[DP]AA[KQ]C(Carbamidomethyl (C))[DP]AA{I|L};[DP]AA[KQ][CG]ADPA{I|L};AA[RD]DQNADPA{I|L};AA[RD]DQN[DP]AA{I|L};[DP]AA[HA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YAA{I|L};AASP{[DS]|[MA]|[CV]|TT}QNADPA{I|L};[QT]P{[DS]|[MA]|[CV]|TT}QNADPA{I|L};AA[RD]DQGGADPA{I|L};AA[RD]D[AG]NADPA{I|L} 6.5771;6.1515;5.8525;5.5138;5.0881;4.935;4.9005;4.7963;4.7892;4.7892 -;-;-;-;-;-;-;-;-;- 3777 1 2.238 96057.1 0.6800000071525574 1944 4042 5985 SUDHL4_400M_050219_1,5988 SUDHL4_400M_050219_1,5988,YLHDQNPDAAL True True YLHDQNPDAAL 31.01825 628.798693835735 1991694.25 5985.0 ENST00000597026.5_1_19:19017767-19023834:-|nuORF;;nc|ENSG00000105669|O14579-3|COPE;;ENSG00000105669|ENST00000262812|COPE 8.646398067474365 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5989 31.02 52.0 987080.0 25 0 132420.0 -1 0 76 490.2859729380156 489.2786964714156 1 490.2856323122978 MULTI CID FTMS 0 0 0 5985 1132011.625 0.1571791499000215 7 -0.2521820068359375 4 5 V 1 -1 10.278 0.0 0.0 2.1006 0.0 0.0 372.1995929331328 0.0 372.1995929331328 0.0 4.793036574208873 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.1006 - 8 + 1 2.238 46074.7 1.0 1945 4042 5985 SUDHL4_400M_050219_1,5989 SUDHL4_400M_050219_1,5989, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5990 31.033 800.0 36340.0 25 0 11180.0 -1 0 25 1190.47423565833 3568.400877575191 3 1191.144824206829 MULTI CID FTMS 0 0 0 5985 90728.296875 1.0 0 0.0 5 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.238 36201.8 0.3899999856948852 1946 4042 5985 SUDHL4_400M_050219_1,5990 SUDHL4_400M_050219_1,5990, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5992 31.038 36.0 959280.0 25 0 167660.0 + -1 AQQHCCSWVFV 11 53 711.3075970249783 1420.6006411167566 2 711.8016235232353 MULTI CID FTMS 0 0 0 5991 1211896.0 0.0601805651340691 13 -0.5046043395996094 1 2 Carbamidomethyl (C) _AQQHC(Carbamidomethyl (C))C(Carbamidomethyl (C))SWVFV_ REV__ENSG00000132718|ENST00000368324|SYT11 2.9952420565917617 0.861016188266951 5 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA 10 -1 60.182 0.0 0.0 4.2364 0.0 0.0 0.0 324.1359670522406 324.1359670522406 39.21327198560853 0.0 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.3807196863200844 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA 4.2364 - 373 1 2.238 30662.0 1.0 1947 4043 5991 SUDHL4_400M_050219_1,5992 SUDHL4_400M_050219_1,5992,AQQHCCSWVFV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5993 31.052 800.0 60467.0 25 0 17434.0 -1 0 38 1077.7666032824031 3230.2779804474094 3 1078.434985339642 MULTI CID FTMS 0 0 0 5991 102961.0390625 0.4145920203367897 -2 0.0565872192382812 2 5 G 1 -1 5.4846 0.0 0.0 0.16979 0.0 0.0 2662.065957597604 508.1664522760376 3170.232409873641 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.16979 - 4 + 1 2.238 51542.3 0.4399999976158142 1948 4043 5991 SUDHL4_400M_050219_1,5993 SUDHL4_400M_050219_1,5993, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 5994 31.057 282.0 259650.0 25 0 11745.0 + 17102 KLFHEVVQA 9 112 535.8032368677617 1069.591920802323 2 535.8035156130791 MULTI CID FTMS 0 0 0 5991 156373.609375 0.7221807657334591 -1 0.0379695892333984 3 Unmodified _KLFHEVVQA_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000487214.1_1_1:889839-894659:-|nuORF 32.037481411007896 0.1235546156350648 5 [{I|L}A]D{I|L}{I|L}EVVQA 10 4 + 31.743 0.0 0.0 2.9678 2.9678 74.182 0.0 0.0 0.0 1.6662797179427675 4.10515153327772 1.6662797179427675 1.6662797179427675 0 0.8979400086720375 1.3979400086720375 0.0 0.0 [{I|L}A]D{I|L}{I|L}EVVQA;{[{M(Oxidation (M))|F}H]|[RQ]}EV{I|L}KVQA;{[CP]|[EA]}V{I|L}{I|L}EVVQA;{[{M(Oxidation (M))|F}H]|[RQ]}[K{I|L}]EVVQA;{[{M(Oxidation (M))|F}H]|[RQ]}E[K{I|L}]VVQA;[{I|L}A][PS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KVQA;[YG]VV[HV]VVQA;{[{M(Oxidation (M))|F}H]|[RQ]}EVV[K{I|L}]QA;[QA][HK]{M(Oxidation (M))|F}[K{I|L}]QA 2.9678;2.812;2.4509;2.4036;2.3493;2.0595;1.0032;0.82232;0.13244 -;-;-;-;-;-;-;-;- 202 1 2.238 63195.8 1.0 1949 4043 5991 SUDHL4_400M_050219_1,5994 SUDHL4_400M_050219_1,5994,KLFHEVVQA True True KLFHEVVQA 31.057311 535.803515613079 1098200.75 5991.0 ENSG00000188976|ENST00000327044|NOC2L;;ENST00000487214.1_1_1:889839-894659:-|nuORF 5.759613513946533 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5995 31.071 800.0 86069.0 25 0 7624.2 + -1 NMFCTRLSRCF 11 77 754.3330211637714 1506.651489394343 2 754.3338500857353 MULTI CID FTMS 0 0 0 5991 78958.296875 0.6710349022853662 -7 0.2572498321533203 4 2 Carbamidomethyl (C),Oxidation (M) _NM(Oxidation (M))FC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 5.296884461304476 0.8501568894076437 5 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NW[RH]{M(Oxidation (M))|F}Y 11 -1 + 64.539 0.0 0.0 4.2836 4.2836 83.773 0.0 0.0 0.0 49.90019666222991 2.450471177594977 2.450471177594977 9.128498242810998 0 1.6237125054200234 0.0 0.0 0.8494850021680094 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NW[RH]{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGW[RH]{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NW[RH]{M(Oxidation (M))|F}Y;{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NAD[RH]{M(Oxidation (M))|F}Y;{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NW[RH]{M(Oxidation (M))|F}Y 4.2836;3.6777;3.6777;2.6643;2.4253 -;-;-;-;- 256 + 1 2.238 55662.8 0.5400000214576721 1950 4043 5991 SUDHL4_400M_050219_1,5995 SUDHL4_400M_050219_1,5995,NMFCTRLSRCF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5996 31.085 800.0 185720.0 25 0 13137.0 -1 LEEICDRMKEY 11 127 751.3400045574701 1500.6654561817402 2 751.3433105349541 MULTI CID FTMS 0 0 0 5991 82022.703125 0.2319348136057153 -5 0.1492118835449218 5 Carbamidomethyl (C),Oxidation (M) _LEEIC(Carbamidomethyl (C))DRM(Oxidation (M))KEY_ ENSG00000257727|ENST00000273308|CNPY2 12.240655878213236 0.7805268987462184 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 77.546 0.0 0.0 5.1674 5.1674 83.228 0.0 0.0 0.0 7.329270240956248 10.62977812912628 7.329270240956248 4.551176451894634 0 1.0924778212679485 1.6989700043360187 0.3494850021680094 0.805462187404089 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEAQQNA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EAAEAQQNA{M(Oxidation (M))|F}Y;[EP]T[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;[EP]YAAEAQQNA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[RD]AQQNA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEAQ[AG]NA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEAQQGGA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEA[AG]QNA{M(Oxidation (M))|F}Y;[TP]{M(Oxidation (M))|F}WEAQQNA{M(Oxidation (M))|F}Y;[EP]Y[RD]AQQNA{M(Oxidation (M))|F}Y 5.1674;4.8642;4.679;4.6313;4.6222;4.5612;4.5612;4.5612;4.4313;4.3893 -;-;-;-;-;-;-;-;-;- 6598 1 2.238 107802.7 0.5400000214576721 1951 4043 5991 SUDHL4_400M_050219_1,5996 SUDHL4_400M_050219_1,5996,LEEICDRMKEY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 5998 31.09 91.0 645970.0 25 0 40374.0 + 34012 SLITETASI 9 84 467.7591031667558 933.5036534003116 2 467.7589294314384 MULTI CID FTMS 0 0 0 5997 482118.625 0.8625503291465805 2 -0.0794792175292968 1 Unmodified _SLITETASI_ REV__ENSG00000188738|ENST00000424728|FSIP2;REV__nc|ENSG00000188738|Q5CZC0-2|FSIP2 32.30548876998284 0.1201446275138228 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ER[VP]S{I|L} 8 -1 + 47.783 0.0 0.0 5.1187 5.1187 88.895 0.0 0.0 0.0 3.4948500216800937 26.81417813229345 3.4948500216800937 11.658781176037891 0 1.610924374808178 0.0 0.3807196863200844 0.3252574989159953 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ER[VP]S{I|L};{I|L}{[{M(Oxidation (M))|F}C]|[YS]}R[VP]S{I|L};[VP][WH][VP]S{I|L};{I|L}{[{M(Oxidation (M))|F}C]|[YS]}R[VS]P{I|L};{[{M(Oxidation (M))|F}D]|MM}[RK]QQ{I|L} 5.1187;3.8698;3.6197;3.0056;0.99423 -;-;-;-;- 170 1 2.238 53875.5 1.0 1952 4044 5997 SUDHL4_400M_050219_1,5998 SUDHL4_400M_050219_1,5998,SLITETASI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 5999 31.096 297.0 174690.0 25 0 11154.0 + 32644 SAYSQEYL 8 110 480.71701435598106 959.419475778762 2 480.7174865603447 MULTI CID FTMS 0 0 0 5997 66406.3359375 0.1569697353139121 4 -0.1287803649902343 2 Unmodified _SAYSQEYL_ REV__ENST00000456760.1_1_9:125449379-125449940:+|nuORF 10.183394434864962 0.7604730176254005 5 {[SA]|[TG]}H 3 -1 18.161 0.0 0.0 1.8929 0.0 0.0 0.0 661.2690600895621 661.2690600895621 0.2018122933698443 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[SA]|[TG]}H 1.8929 - 116 1 2.238 43999.8 1.0 1953 4044 5997 SUDHL4_400M_050219_1,5999 SUDHL4_400M_050219_1,5999,SAYSQEYL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6000 31.099 138.0 445720.0 25 0 74163.0 + + 22876 SLTGHISTV 9 93 457.7513235403087 913.4880941474174 2 457.7504150271416 MULTI CID FTMS 0 0 0 5997 288564.46875 0.6316896289365235 -3 0.1081390380859375 3 Unmodified _LSASHTSVI_ ENSG00000171566|ENST00000499023|PLRG1;nc|ENSG00000171566|O43660-2|PLRG1 28.486842064014134 0.1687311288560894 5 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HT]TV 8 -1 + 32.826 0.0 0.0 3.5935 3.5935 79.62 0.0 0.0 0.0 0.6420404410090441 5.6427143043856205 0.6420404410090441 5.6427143043856205 0 0.9247425010840048 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HT]TV;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HT]S{I|L};{[TV]|[{I|L}S]}[KQ]YY{I|L} 3.5935;2.9758;2.4962 -;-;- 229 + 1 2.238 52560.4 1.0 1954 4044 5997 SUDHL4_400M_050219_1,6000 SUDHL4_400M_050219_1,6000,LSASHTSVI False False SLTGHISTV 31.0986 457.750415027142 1967459.375 5997.0 ENSG00000171566|ENST00000499023|PLRG1;;nc|ENSG00000171566|O43660-2|PLRG1 3.404239018758138 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6001 31.102 179.0 332930.0 25 0 30048.0 + 11907 GLWRTTPEAHA 11 86 413.54735022494987 0 413.5473205447197 PEAK CID FTMS 0 0 0 5997 174505.453125 0.299314390997865 -4 0.1487636566162109 4 Unmodified _GLWRTTPEAHA_ ENSG00000104635|ENST00000381237|SLC39A14;nc|ENSG00000104635|Q15043-2|SLC39A14;nc|ENSG00000104635|Q15043-3|SLC39A14 21.53697664764585 0.3337597044351383 5 EA 2 9 6.3701 0.0 0.0 0.77206 0.0 0.0 398.8952242762685 223.08382593326408 621.9790502095326 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 + EA 0.77206 + + 27 + 1 2.238 51126.5 1.0 1955 4044 5997 SUDHL4_400M_050219_1,6001 SUDHL4_400M_050219_1,6001,GLWRTTPEAHA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6002 31.11 439.0 281550.0 25 0 30772.0 + 34445 SLYEENNKL 9 138 555.277265999599 1108.5399790659978 2 555.2773315310478 MULTI CID FTMS 0 0 0 5997 135413.4375 0.7931833418373767 -1 0.0515518188476562 5 Unmodified _SLYEENNKL_ ENSG00000135968|ENST00000309863|GCC2 56.17704186161178 0.0281986971544335 5 {[TV]|[{I|L}S]}YEENNK{I|L} 9 0 + 64.534 0.0 0.0 5.8215 5.8215 86.677 0.0 0.0 0.0 27.147642715192504 6.575773191777934 6.575773191777934 6.575773191777934 0 0.4247425010840047 2.0 0.5941876774005248 1.3945990182825423 + + {[TV]|[{I|L}S]}YEENNK{I|L};{[TV]|[{I|L}S]}YEEN[KQ]V;{[TV]|[{I|L}S]}YEEN[KA]GV;{[TV]|[{I|L}S]}YEENGGK{I|L};{[TV]|[{I|L}S]}YEEGGNK{I|L};{[TV]|[{I|L}S]}YEEGG[KQ]V;{[TV]|[{I|L}S]}YEEGG[KA]GV;{[TV]|[{I|L}S]}YEEGGGGK{I|L};{[TV]|[{I|L}S]}Y{M(Oxidation (M))|F}M[HA]K{I|L};{[TV]|[{I|L}S]}Y{M(Oxidation (M))|F}M[RP]PV 5.8215;5.2283;5.187;4.9908;4.9908;4.3976;4.3603;4.1641;3.2178;3.071 +;-;-;-;-;-;-;-;-;- + 1582 + 1 2.238 97829.0 1.0 1956 4044 5997 SUDHL4_400M_050219_1,6002 SUDHL4_400M_050219_1,6002,SLYEENNKL True True SLYEENNKL 31.109873 555.277331531048 832956.75 5997.0 ENSG00000135968|ENST00000309863|GCC2 5.2187527020772295 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6003 31.124 800.0 130440.0 25 0 28515.0 -1 DHMKKMAPTVL 11 110 643.8331160523853 1285.6516791715703 2 643.8329955935478 MULTI CID FTMS 0 0 0 5997 121233.890625 1.0 0 0.0 6 Oxidation (M) _DHM(Oxidation (M))KKMAPTVL_ ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR 26.268140514670165 0.4754186812857754 5 SV{[{M(Oxidation (M))|F}H]|[RQ]}QSANV{I|L} 10 -1 64.205 0.0 0.0 4.9939 0.0 0.0 185.080370017775 0.0 185.080370017775 0.0 58.72007059029448 0.0 0.0 0 0.7134679910804405 0.0 0.6307196863200843 1.1861818737241734 SV{[{M(Oxidation (M))|F}H]|[RQ]}QSANV{I|L} 4.9939 - 448 1 2.238 81800.3 0.6299999952316284 1957 4044 5997 SUDHL4_400M_050219_1,6003 SUDHL4_400M_050219_1,6003,DHMKKMAPTVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6004 31.129 305.0 231010.0 25 0 9964.4 + 1958 AMPPPPPQGV 10 119 495.7575038734756 0 495.7559692263603 PEAK CID FTMS 0 0 0 5997 108984.1171875 0.383630257438237 81 -2.701133728027344 7 Unmodified _AMPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 26.88365393820708 0.2428278298207118 5 GPQH 4 8 11.191 0.0 0.0 1.1309 0.0 0.0 319.1571952193547 248.1221102350219 567.2793054543766 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 GPQH 1.1309 - 313 + 1 2.238 57869.6 1.0 1958 4044 5997 SUDHL4_400M_050219_1,6004 SUDHL4_400M_050219_1,6004,AMPPPPPQGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6006 31.134 18.0 3022300.0 25 0 467500.0 + 18581 LADDSVRSL 9 59 488.25904920164334 974.5035454700868 2 488.2588073611259 MULTI CID FTMS 0 0 0 6005 2137072.5 0.980460615047266 -2 0.0958175659179687 1 Unmodified _LADDSVRSL_ ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL 27.22323531849824 0.1848086127304535 5 {I|L}ADDSVRTV 9 2 + 78.075 0.0 0.0 8.0118 8.0118 90.131 0.0 0.0 0.0 66.48116584525795 9.710536658395128 9.710536658395128 4.771212547196626 0 0.805462187404089 2.0 0.0 0.0 {I|L}ADDSVRTV;{I|L}ADDVSRTV 8.0118;7.5222 -;- 92 + 1 2.238 50640.6 1.0 1959 4045 6005 SUDHL4_400M_050219_1,6006 SUDHL4_400M_050219_1,6006,LADDSVRSL False True LADDSVRSL 31.134062 488.258807361126 9923744.0 6005.0 ENSG00000138078|ENST00000409411|PREPL;;nc|ENSG00000138078|Q4J6C6|PREPL;;nc|ENSG00000138078|Q4J6C6-2|PREPL 4.985843499501546 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6007 31.139 276.0 228410.0 25 0 15630.0 + 17145 KLIDPQTQV 9 113 521.3010694349153 1040.5875859366306 2 521.3001586794853 MULTI CID FTMS 0 0 0 6005 130626.609375 0.5060448920451873 -4 0.15240478515625 2 Unmodified _KLIDPQTQV_ ENSG00000157500|ENST00000288266|APPL1;ENST00000482800.5_1_3:57261911-57301862:+|nuORF 27.628801355627647 0.1796483985696185 5 [K{I|L}]{I|L}D[QP]TQV 9 0 + 27.183 0.0 0.0 2.6123 2.6123 78.005 0.0 0.0 0.0 3.990437130769141 14.418899359809142 3.990437130769141 5.740312677277188 0 0.3539171939081173 0.0 0.4247425010840047 0.3252574989159953 + + [K{I|L}]{I|L}D[QP]TQV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}][QP]TQV 2.6123;2.0606 +;- + 96 1 2.238 53326.4 1.0 1960 4045 6005 SUDHL4_400M_050219_1,6007 SUDHL4_400M_050219_1,6007,KLIDPQTQV False True KLIDPQTQV 31.139156 521.301 1758212.625 6005.0 ENST00000482800.5_1_3:57261911-57301862:+|nuORF;;ENSG00000157500|ENST00000288266|APPL1 5.792957305908203 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6008 31.141 80.0 611160.0 25 0 47930.0 + 18586 LADHTVHVL 9 69 502.7802356936301 1003.5459184540604 2 502.7799865603447 MULTI CID FTMS 0 0 0 6005 429250.4375 0.669409768908638 -3 0.1337871551513672 3 Unmodified _LADHTVHVL_ ENSG00000198826|ENST00000361627|ARHGAP11A;ENST00000564902.5_1_15:30917016-30927830:+|nuORF;ENST00000566362.1_1_15:30922935-30927517:+|nuORF;ENST00000568574.1_1_15:30926543-30927454:+|nuORF;nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A;nc|ENSG00000285077|Q3KRB8|ARHGAP11B 36.04419817259434 0.0971720506436186 5 HVE{[QV]|[N{I|L}]|[RA]|[KV]}Y 6 7 22.184 0.0 0.0 2.2105 0.0 0.0 230.16460232127605 0.0 230.16460232127605 0.0 4.235162698957282 0.0 0.0 0 0.8494850021680094 0.0 0.5 0.3494850021680094 HVE{[QV]|[N{I|L}]|[RA]|[KV]}Y 2.2105 - 94 + 1 2.238 43687.5 1.0 1961 4045 6005 SUDHL4_400M_050219_1,6008 SUDHL4_400M_050219_1,6008,LADHTVHVL True True LADHTVHVL 31.14097 502.779986560345 3063840.25 6005.0 ENST00000566362.1_1_15:30922935-30927517:+|nuORF;;nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A;;ENSG00000198826|ENST00000361627|ARHGAP11A;;ENST00000564902.5_1_15:30917016-30927830:+|nuORF;;nc|ENSG00000285077|Q3KRB8|ARHGAP11B;;ENST00000568574.1_1_15:30926543-30927454:+|nuORF 1.617963433265686 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6009 31.149 424.0 237590.0 25 0 25664.0 + 20934 LNEISEETTIQ 11 104 638.8181303158553 1275.6217076985106 2 638.8184692263603 MULTI CID FTMS 0 0 0 6005 213872.390625 0.4087270195744648 -4 0.15240478515625 4 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 53.40400417844725 0.0987786977674846 5 {I|L}NAD{[CA]|SS}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q 11 6 + 71.072 0.0 0.0 5.5715 5.5715 81.521 0.0 0.0 0.0 9.792943258743612 16.2631781536154 9.792943258743612 1.8045606445813007 0 1.8494850021680087 1.3979400086720375 0.0 1.0629529932484498 {I|L}NAD{[CA]|SS}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}NAD{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}NW{[CA]|SS}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}NW{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}ADE[R{M(Oxidation (M))|F}]GN{I|L}Q;{I|L}NA{[C(Carbamidomethyl (C))E]|[WC]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}A[YN]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{I|L}Q;{[QG]|[NA]}D{[RE]|[WV]}{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QG]|[NA]}{I|L}DE[R{M(Oxidation (M))|F}]GN{I|L}Q;{[CA]|SS}{I|L}{[WN]|[YH]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q 5.5715;5.4301;5.0971;4.9591;4.8038;4.7821;4.5733;3.0384;2.8249;2.8031 -;-;-;-;-;-;-;-;-;- 831 + 1 2.238 84617.2 1.0 1962 4045 6005 SUDHL4_400M_050219_1,6009 SUDHL4_400M_050219_1,6009,LNEISEETTIQ True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6010 31.157 490.0 199380.0 25 0 20985.0 + 11906 GLWRTTPEAHA 11 108 619.8175346853691 1237.620516437538 2 619.8151122927666 MULTI CID FTMS 0 0 0 6005 95694.203125 0.5707707558818401 -4 0.15240478515625 5 Unmodified _GLWRTTPEAHA_ ENSG00000104635|ENST00000381237|SLC39A14;nc|ENSG00000104635|Q15043-2|SLC39A14;nc|ENSG00000104635|Q15043-3|SLC39A14 26.020703789607367 0.4812285719068541 5 {[{M(Oxidation (M))|F}H]|[RQ]}[VS]M{I|L}[EP]AHA 11 6 + 40.45 0.0 0.0 3.2683 3.2683 80.016 0.0 0.0 0.0 1.504928410806876 28.85592936331012 1.504928410806876 6.940293679874323 0 1.5 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}[VS]M{I|L}[EP]AHA;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}[NP]{I|L}[EP]AHA;{[{M(Oxidation (M))|F}H]|[RQ]}W[KS][RV]AHA 3.2683;2.7076;1.8934 -;-;- 172 1 2.238 76797.9 1.0 1963 4045 6005 SUDHL4_400M_050219_1,6010 SUDHL4_400M_050219_1,6010,GLWRTTPEAHA False True GLWRTTPEAHA 31.157201 619.815112292767 4079119.5 6005.0 ENSG00000104635|ENST00000381237|SLC39A14;;nc|ENSG00000104635|Q15043-3|SLC39A14;;nc|ENSG00000104635|Q15043-2|SLC39A14 7.083999315897624 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6011 31.164 408.0 340940.0 25 0 15643.0 29886 QRQLEVAQV 9 189 357.5374166278367 1069.5904204837102 3 357.5377075076103 MULTI CID FTMS 0 0 0 6005 95308.03125 0.8629734152819244 2 -0.0460395812988281 6 Unmodified _QRQLEVAQV_ ENSG00000263155|ENST00000267853|MYZAP;nc|ENSG00000263155|P0CAP1-10|MYZAP;nc|ENSG00000263155|P0CAP1-11|MYZAP;nc|ENSG00000263155|P0CAP1-2|MYZAP;nc|ENSG00000263155|P0CAP1-3|MYZAP;nc|ENSG00000263155|P0CAP1-4|MYZAP;nc|ENSG00000263155|P0CAP1-5|MYZAP;nc|ENSG00000263155|P0CAP1-6|MYZAP;nc|ENSG00000263155|P0CAP1-7|MYZAP;nc|ENSG00000263155|P0CAP1-8|MYZAP;nc|ENSG00000263155|P0CAP1-9|MYZAP 5.731851221503515 0.7145881442174411 5 A 1 8 12.764 0.0 0.0 1.1934 0.0 0.0 980.5421931050954 0.0 980.5421931050954 0.0 -8.503749548595643 -8.503749548595643 0.0 0 0.0 0.0 0.0 0.0 + A 1.1934 + + 55 + 1 2.238 114750.0 1.0 1964 4045 6005 SUDHL4_400M_050219_1,6011 SUDHL4_400M_050219_1,6011,QRQLEVAQV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6013 31.17 71.0 745120.0 25 0 71530.0 + 38854 TVIPNSHVY 9 90 515.2719636024215 1028.5293742716428 2 515.2718383669853 MULTI CID FTMS 0 0 0 6012 482847.0 0.7649902875454914 3 -0.0831813812255859 1 Unmodified _TVIPNSHVY_ ENSG00000117133|ENST00000370654|RPF1 27.628801355627647 0.1796483985696185 5 {[TV]|[{I|L}S]}{I|L}PCT 6 5 45.667 0.0 0.0 4.44 0.0 0.0 0.0 411.18503748111567 411.18503748111567 32.47933455448525 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.3054621874040891 0.0 {[TV]|[{I|L}S]}{I|L}PCT 4.44 - 293 + 1 2.249 44492.0 1.0 1965 4046 6012 SUDHL4_400M_050219_1,6013 SUDHL4_400M_050219_1,6013,TVIPNSHVY False True TVIPNSHVY 31.170035 515.271838366985 12471411.0 6012.0 ENSG00000117133|ENST00000370654|RPF1 6.613167921702067 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6014 31.175 287.0 216670.0 25 0 25544.0 -1 CPNARCQFAFY 11 74 717.308285075601 1432.602017218002 2 717.3079711794853 MULTI CID FTMS 0 0 0 6012 245711.578125 0.2130049363973564 4 -0.103485107421875 2 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PNARC(Carbamidomethyl (C))QFAFY_ ENSG00000129353|ENST00000335757|SLC44A2;ENST00000589561.5_1_19:10746968-10754058:+|nuORF;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;nc|ENSG00000129353|Q8IWA5-3|SLC44A2 18.1463463914782 0.6576820063886638 5 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 91.373 0.0 0.0 6.3781 6.3781 89.762 0.0 0.0 0.0 10.221157291141836 67.27819116109171 10.221157291141836 9.098233696509112 0 1.0 0.8538719643217619 0.3807196863200844 0.8494850021680094 {[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y;{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQNA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}[YG]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG][AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG]QGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]GGA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}[WY]AQQNA{M(Oxidation (M))|F}Y 6.3781;5.743;5.743;5.743;5.6591;5.3475;5.1097;5.1097;5.1097;5.0961 -;-;-;-;-;-;-;-;-;- 1217 1 2.249 49658.9 1.0 1966 4046 6012 SUDHL4_400M_050219_1,6014 SUDHL4_400M_050219_1,6014,CPNARCQFAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6016 31.192 800.0 252760.0 25 0 17680.0 6408 DYRWPMRYDQW 11 120 808.3604520733659 1614.7063512135317 2 808.3585693240166 MULTI CID FTMS 0 0 0 6015 146546.28125 0.5906629779522925 -3 0.0903053283691406 1 Unmodified _DYRWPMRYDQW_ ENSG00000126107|ENST00000372172|HECTD3;nc|ENSG00000126107|Q5T447-2|HECTD3 0.3070304955306653 0.8736993455979228 5 Y{M(Oxidation (M))|F}ANQQAE[HA]YQ 12 12 84.097 0.0 0.0 5.2082 0.0 0.0 146.08044896919415 0.0 146.08044896919415 0.0 50.69262797490889 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 1.9049471895720984 Y{M(Oxidation (M))|F}ANQQAE[HA]YQ 5.2082 - 4293 + 1 2.249 142217.2 0.6499999761581421 1967 4047 6015 SUDHL4_400M_050219_1,6016 SUDHL4_400M_050219_1,6016,DYRWPMRYDQW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6017 31.195 167.0 431140.0 25 0 29476.0 + -1 SLGLPIMYTV 10 105 555.3007814651523 1108.5870099971046 2 555.3023559451103 MULTI CID FTMS 0 0 0 6015 156532.359375 0.4451147381963677 -4 0.1418571472167968 2 Oxidation (M) _SLGLPIM(Oxidation (M))YTV_ REV__ENSG00000180638|ENST00000433844|SLC47A2;REV__nc|ENSG00000180638|Q86VL8-2|SLC47A2;REV__nc|ENSG00000180638|Q86VL8|SLC47A2 29.081581746732265 0.3152867722954398 5 H{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}P[VP]GV 10 -1 + 48.771 0.0 0.0 4.3994 4.3994 83.267 0.0 0.0 0.0 37.34427538256881 11.067912857052278 11.067912857052278 8.010299956639805 0 2.0 1.0969100130080565 0.0 0.0 H{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}P[VP]GV;H{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}P[VG]PV;H{I|L}{I|L}E[WH]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.3994;3.6768;2.1489 -;-;- 170 + 1 2.249 59802.2 1.0 1968 4047 6015 SUDHL4_400M_050219_1,6017 SUDHL4_400M_050219_1,6017,SLGLPIMYTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6018 31.2 268.0 179670.0 25 0 18780.0 37540 TLHPVWSQQ 9 83 548.2829799657695 1094.551406998339 2 548.2838012576103 MULTI CID FTMS 0 0 0 6015 118704.2265625 0.0788987840498526 76 -2.5482139587402344 3 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 8.97624648632007 0.6013279508813512 5 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 8 26.132 0.0 0.0 2.3874 0.0 0.0 0.0 280.12946497135005 280.12946497135005 13.059706320125668 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 2.3874 - 153 + 1 2.249 42887.8 1.0 1969 4047 6015 SUDHL4_400M_050219_1,6018 SUDHL4_400M_050219_1,6018,TLHPVWSQQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6019 31.214 800.0 175180.0 25 0 13648.0 44201 YLFYCKNCRFY 11 110 760.3442646169954 1518.6739763007906 2 760.3431884646416 MULTI CID FTMS 0 0 0 6015 119518.7109375 0.4884595237537244 -4 0.1418571472167968 4 Unmodified _YLFYCKNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 5 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F}Y 14 12 + 83.253 0.0 0.0 5.4819 5.4819 86.149 0.0 0.0 0.0 6.890617156757699 10.7521226932964 6.890617156757699 6.890617156757699 0 0.8182503180159344 0.721246399047171 0.0 1.8684151806525389 {[QG]|[NA]}GA[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[HV]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q[HV]EA[AG]QNA{M(Oxidation (M))|F}Y 5.4819;5.0282;4.886;4.886;4.886;4.8528;4.4308;4.4308;4.4308;4.2554 -;-;-;-;-;-;-;-;-;- 2570 1 2.249 101701.8 0.6200000047683716 1970 4047 6015 SUDHL4_400M_050219_1,6019 SUDHL4_400M_050219_1,6019,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6021 31.22 189.0 272810.0 25 0 22013.0 -1 0 81 543.3012789566384 542.2940024900383 1 545.3068725466728 MULTI CID FTMS 0 0 0 6020 217272.375 0.6482868788014865 -5 0.1803321838378906 1 5 H 1 -1 11.99 0.0 0.0 2.2109 0.0 0.0 387.22738064120864 0.0 387.22738064120864 0.0 2.4568084691713654 0.0 0.0 0 0.0 0.0 0.0 0.0 H 2.2109 - 5 + 1 2.249 45998.5 1.0 1971 4048 6020 SUDHL4_400M_050219_1,6021 SUDHL4_400M_050219_1,6021, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6022 31.234 800.0 56987.0 25 0 3678.8 -1 0 46 1191.476763051468 3571.4084597546043 3 1191.808764636517 MULTI CID FTMS 0 0 0 6020 102871.046875 0.887584827836776 1 -0.0338802337646484 2 5 D 1 -1 5.4846 0.0 0.0 0.15357 0.0 0.0 97.97905668440248 3355.410448667298 3453.389505351701 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.15357 - 10 + 1 2.249 37286.8 0.4399999976158142 1972 4048 6020 SUDHL4_400M_050219_1,6022 SUDHL4_400M_050219_1,6022, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6023 31.236 84.0 640040.0 25 0 73588.0 + 32554 SAQGNHIPL 9 83 468.7484883388564 935.4824237445127 2 468.7483398318291 MULTI CID FTMS 0 0 0 6020 418815.09375 0.3401094687899598 -5 0.1803321838378906 3 Unmodified _SAQGNHIPL_ ENST00000337198.9_1_8:103876093-103876378:-|nuORF 16.942295170755138 0.3780752226737986 5 {[SA]|[TG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L} 5 5 15.686 0.0 0.0 1.6768 0.0 0.0 0.0 400.2200206568188 400.2200206568188 3.696662315049936 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[SA]|[TG]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L} 1.6768 - 94 1 2.249 46927.2 1.0 1973 4048 6020 SUDHL4_400M_050219_1,6023 SUDHL4_400M_050219_1,6023,SAQGNHIPL False True SAQGNHIPL 31.235728 468.748339831829 16056555.0 6020.0 ENST00000337198.9_1_8:103876093-103876378:-|nuORF 1.6009888698657353 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6024 31.238 118.0 396900.0 25 0 45998.0 + 33805 SLDPHAQVAV 10 79 518.7749482182828 1035.5353435033655 2 518.7747070193291 MULTI CID FTMS 0 0 0 6020 204912.328125 0.7848340260521979 -1 0.0384750366210937 4 Unmodified _SLDPHAQVAV_ ENSG00000162688|ENST00000361915|AGL;nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL 17.11289562659939 0.5604042439455784 5 {I|L}{I|L}[YN]V[MN]AV 9 7 + 20.14 0.0 0.0 1.9449 1.9449 82.093 0.0 0.0 0.0 -0.4059869275676639 3.6878068855543935 -0.4059869275676639 10.985994592184555 0 0.5 1.154901959985743 0.0 0.0 {I|L}{I|L}[YN]V[MN]AV;{[TV]|[{I|L}S]}[WM][KC][R{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QA]V{[ES]|[DT]|[{I|L}C]}VAV 1.9449;0.88401;0.54143 -;-;- 88 + 1 2.249 43094.0 1.0 1974 4048 6020 SUDHL4_400M_050219_1,6024 SUDHL4_400M_050219_1,6024,SLDPHAQVAV False True SLDPHAQVAV 31.238188 518.774707019329 1363363.75 6020.0 nc|ENSG00000162688|P35573-2|AGL;;ENSG00000162688|ENST00000361915|AGL;;nc|ENSG00000162688|P35573-3|AGL 4.581817309061687 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6025 31.248 539.0 162880.0 25 0 11681.0 + 15882 ISRDEITAY 9 128 534.2719860839989 1066.5294192347976 2 534.2722045779228 MULTI CID FTMS 0 0 0 6020 95211.28125 0.9006779781518941 -2 0.0493011474609375 5 Unmodified _ISRDEITAY_ ENSG00000172575|ENST00000310803|RASGRP1;nc|ENSG00000172575|O95267-2|RASGRP1;nc|ENSG00000172575|O95267-3|RASGRP1;nc|ENSG00000172575|O95267-5|RASGRP1 23.80106514851385 0.2283505500606397 5 {[TV]|[{I|L}S]}EEAA{I|L}TAY 10 4 + 47.641 0.0 0.0 4.467 4.467 77.935 0.0 0.0 0.0 8.484769324350552 32.65639351740748 8.484769324350552 1.7609125905568137 0 1.0 1.3010299956639813 0.5 0.0 {[TV]|[{I|L}S]}EEAA{I|L}TAY;{[TV]|[{I|L}S]}E[RD]{I|L}TAY;{[TV]|[{I|L}S]}EE[RV]TAY;[{I|L}T]DEAA{I|L}TAY;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{I|L}EAY;[{I|L}T]D[RD]{I|L}TAY;{[TV]|[{I|L}S]}R{[ES]|[DT]|[{I|L}C]}{I|L}EAY;[TA][R{M(Oxidation (M))|F}]P{I|L}EAY;{[TV]|[{I|L}S]}EW[W{I|L}]AY;[{I|L}T]DE[RV]TAY 4.467;4.3019;3.8545;3.5859;3.467;3.4208;3.3923;3.1621;3.0391;2.9734 -;-;-;-;-;-;-;-;-;- 600 1 2.249 73255.9 1.0 1975 4048 6020 SUDHL4_400M_050219_1,6025 SUDHL4_400M_050219_1,6025,ISRDEITAY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6027 31.257 282.0 189080.0 25 0 13063.0 + 13424 HLPDGSVTV 9 92 462.7425267527118 923.4705005722236 2 462.7428771853447 MULTI CID FTMS 0 0 0 6026 95698.7578125 0.6300183119964252 -4 0.1183948516845703 1 Unmodified _HLPDGSVTV_ ENSG00000127054|ENST00000435064|INTS11;ENST00000470030.6_1_1:1247241-1248711:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 44.40701690623563 0.0526327925666318 5 [DP]GS[H{I|L}]VTV 9 4 [DP]GS[H{I|L}]V + + 23.756 1.9024 0.26971 2.5724 2.5724 53.529 0.0 0.0 0.0 0.0 11.765997036641592 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 [DP]GS[H{I|L}]VTV 2.5724 - 77 + 1 2.259 49909.0 1.0 1976 4049 6026 SUDHL4_400M_050219_1,6027 SUDHL4_400M_050219_1,6027,HLPDGSVTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6028 31.26 145.0 518510.0 25 0 45119.0 -1 0 91 416.2490997163575 415.2418232497575 1 416.2486450076103 MULTI CID FTMS 0 0 0 6026 243631.328125 0.0658979368226618 11 -0.6519603729248047 2 5 K 1 -1 13.452 0.0 0.0 3.2396 0.0 0.0 269.1359863130372 0.0 269.1359863130372 0.0 2.738929155589487 0.0 0.0 0 0.0 0.0 0.0 0.1462566630072955 K 3.2396 - 10 + 1 2.259 64605.8 1.0 1977 4049 6026 SUDHL4_400M_050219_1,6028 SUDHL4_400M_050219_1,6028, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6029 31.261 49.0 1021500.0 25 0 117650.0 + 44226 YLHNQGIGV 9 76 500.764362498665 999.51417206413 2 500.7643005251884 MULTI CID FTMS 0 0 0 6026 1020089.1875 0.627797899061078 -3 0.0831813812255859 3 Unmodified _YLHNQGIGV_ ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 32.78568957990786 0.1150597335874693 5 [VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NQG{I|L}R 9 6 + 44.336 0.0 0.0 4.4357 4.4357 81.397 0.0 0.0 0.0 4.83960679249968 6.465912507003608 4.83960679249968 4.83960679249968 0 0.5 1.5228787452803376 0.2887254899964357 0.3807196863200844 [VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NQG{I|L}R;{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]}NQG{I|L}R;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GGQG{I|L}R;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N[AG]G{I|L}R;[VG]QQHY{I|L}GV;[H{I|L}]YNQG{I|L}GV;{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]}N[AG]G{I|L}R;{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]}GGQG{I|L}R;[VG]QQ{[QD]|[EN]|[WG]|[KD]|[RS]}G{I|L}R;[HN]{[QG]|[NA]}{I|L}Y{I|L}GV 4.4357;3.9515;3.5145;3.5145;3.1476;3.1408;3.0303;3.0303;2.5721;2.3903 -;-;-;-;-;-;-;-;-;- 218 1 2.259 46539.3 1.0 1978 4049 6026 SUDHL4_400M_050219_1,6029 SUDHL4_400M_050219_1,6029,YLHNQGIGV True True YLHNQGIGV 31.260926 500.764300525188 8540957.0 6026.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B 8.810173829396566 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6030 31.264 180.0 318800.0 25 0 24568.0 9555 FLHSLVQF 8 99 495.773481213226 989.532409493252 2 495.7747375369072 MULTI CID FTMS 0 0 0 6026 79870.65625 0.7094577724062822 -3 0.0831813812255859 4 Unmodified _FLHSLVQF_ ENSG00000181958|ENST00000641526|OR4A15;nc|ENSG00000181958|Q8NGL6|OR4A15 13.50788311687929 0.7113601687236069 5 EQ{M(Oxidation (M))|F} 3 6 30.445 0.0 0.0 3.0767 0.0 0.0 567.3484974591812 0.0 567.3484974591812 0.0 17.346368802282015 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 EQ{M(Oxidation (M))|F} 3.0767 - 166 1 2.259 49024.2 1.0 1979 4049 6026 SUDHL4_400M_050219_1,6030 SUDHL4_400M_050219_1,6030,FLHSLVQF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6031 31.268 185.0 407220.0 25 0 151480.0 -1 0 80 450.23672690477736 449.22945043817737 1 450.2359496951103 MULTI CID FTMS 0 0 0 6026 218829.859375 0.3329843108451548 -4 0.1183948516845703 5 5 {I|L}GN{M(Oxidation (M))|F} 4 -1 + 20.177 0.0 0.0 4.4915 4.4915 86.541 0.0 0.0 0.0 8.187587626244124 7.474250108400469 7.474250108400469 9.719712763997563 0 0.0 0.0 0.0 0.0 {I|L}GN{M(Oxidation (M))|F};{I|L}GGG{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F} 4.4915;2.3279;1.0914 -;-;- 21 + 1 2.259 64413.9 1.0 1980 4049 6026 SUDHL4_400M_050219_1,6031 SUDHL4_400M_050219_1,6031, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6033 31.273 27.0 2026700.0 25 0 122200.0 + 28108 PPLRTPPLS 9 80 489.2925721410247 976.5705913488492 2 489.2925903201103 MULTI CID FTMS 0 0 0 6032 1804585.375 0.8586828680173608 2 -0.0515308380126953 1 Unmodified _PPLRTPPLS_ REV__ENST00000266085.6_1_22:33256171-33256252:+|nuORF 25.399314129420983 0.2080152500878129 5 [R{I|L}]PPP[TP]TV 9 -1 + 40.942 0.0 0.0 4.1925 4.1925 86.413 0.0 0.0 0.0 14.366130211356069 22.044837997551696 14.366130211356069 13.266062568876713 0 0.9124379954164592 1.0457574905606752 0.4247425010840047 0.0 [R{I|L}]PPP[TP]TV;[R{I|L}]PPP{[VA]|[{I|L}G]}EV;[R{I|L}][YK][TP]TV;[YV]{I|L}{I|L}[RN]TV;[R{I|L}][YK]{[VA]|[{I|L}G]}EV;[R{I|L}][YG][K{I|L}]EV 4.1925;2.834;2.2382;1.031;0.87973;0.57148 -;-;-;-;-;- 77 1 2.259 46582.9 1.0 1981 4050 6032 SUDHL4_400M_050219_1,6033 SUDHL4_400M_050219_1,6033,PPLRTPPLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6034 31.278 262.0 354370.0 25 0 54403.0 + 19734 LGPPRLAPG 9 91 439.2665232806816 876.5184936281631 2 439.2668334841728 MULTI CID FTMS 0 0 0 6032 204047.59375 0.0310144345738189 100 -3.3198204040527344 2 Unmodified _LGPPRLAPG_ REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF 16.942295170755138 0.3780752226737986 5 {[VA]|[{I|L}G]}PPA 5 -1 41.823 0.0 0.0 4.7714 0.0 0.0 0.0 438.2465097395779 438.2465097395779 32.42545092195469 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.7714 - 83 + 1 2.259 75018.9 1.0 1982 4050 6032 SUDHL4_400M_050219_1,6034 SUDHL4_400M_050219_1,6034,LGPPRLAPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6035 31.283 271.0 285560.0 25 0 17599.0 + 17073 KLDQDLNEV 9 124 537.2785017947318 1072.5424506562636 2 537.2784301638603 MULTI CID FTMS 0 0 0 6032 187804.625 0.2369276115189336 -3 0.0926589965820312 3 Unmodified _KLDQDLNEV_ ENSG00000108055|ENST00000361804|SMC3 43.77239144664712 0.0547478964384323 5 [{M(Oxidation (M))|F}V]N{I|L}DQK 7 8 50.76 0.0 0.0 4.7327 0.0 0.0 0.0 225.08846460513908 225.08846460513908 34.319686641160075 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.2614393726401688 1.048455006504028 [{M(Oxidation (M))|F}V]N{I|L}DQK 4.7327 - 816 + 1 2.259 66795.3 1.0 1983 4050 6032 SUDHL4_400M_050219_1,6035 SUDHL4_400M_050219_1,6035,KLDQDLNEV True True KLDQDLNEV 31.282617 537.27843016386 7492348.5 6032.0 ENSG00000108055|ENST00000361804|SMC3 4.785686492919922 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6037 31.292 380.0 216690.0 25 0 24091.0 + 17310 KLSLSQNLI 9 118 508.31277365897336 1014.6109943847468 2 508.8150817751884 MULTI CID FTMS 0 0 0 6036 152753.90625 0.834692648258533 -1 0.0146446228027343 1 Unmodified _KLSLSQNLI_ REV__ENSG00000163104|ENST00000354268|SMARCAD1;REV__nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;REV__nc|ENSG00000163104|Q9H4L7-3|SMARCAD1 20.41453444215458 0.284085796332423 5 [KT]VV{M(Oxidation (M))|F}V[{I|L}P]{I|L} 9 -1 + 52.099 0.0 0.0 5.1348 5.1348 84.904 0.0 0.0 0.0 2.582334120883374 21.030743714822428 2.582334120883374 6.817496819840656 0 0.0 0.0 0.9417509724019616 0.3807196863200844 [KT]VV{M(Oxidation (M))|F}V[{I|L}P]{I|L};[KT]V{M(Oxidation (M))|F}VV[{I|L}P]{I|L};[KT]VVTQ{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[NV]|[RG]}KVV{M(Oxidation (M))|F}GPR;[KT]V{I|L}SQ{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[Q{I|L}][VS]{M(Oxidation (M))|F}V[{I|L}P]{I|L};[{I|L}T]KVSQ{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[KT]VVT[AG]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[NV]|[RG]}KVV{M(Oxidation (M))|F}R[PG];[TA]R{M(Oxidation (M))|F}VV[{I|L}P]{I|L} 5.1348;4.4629;4.1397;3.6074;3.4916;3.3854;3.2805;3.2321;3.0676;3.0676 -;-;-;-;-;-;-;-;-;- 1112 1 2.259 68636.8 1.0 1984 4051 6036 SUDHL4_400M_050219_1,6037 SUDHL4_400M_050219_1,6037,KLSLSQNLI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6038 31.3 444.0 454960.0 25 0 50296.0 + 1637 ALMDQVHHM 9 194 361.1681568836717 1080.4826412512152 3 361.1675292849541 MULTI CID FTMS 0 0 0 6036 137173.609375 0.4555424425379832 -2 0.0349483489990234 2 Unmodified _ALMDQVHHM_ ENSG00000116497|ENST00000373475|S100PBP 31.26834338654808 0.1333407332142048 5 [{I|L}A]MDQVHHM 9 0 + 69.16 0.0 0.0 6.4009 6.4009 93.567 0.0 0.0 0.0 55.88106347231847 7.447274948966935 7.447274948966935 18.4556125503638 0 0.25 2.0 0.0 0.9247425010840048 + + [{I|L}A]MDQVHHM;[{I|L}A]MD[AG]VHHM 6.4009;4.6928 +;- + 174 + 1 2.259 160054.1 1.0 1985 4051 6036 SUDHL4_400M_050219_1,6038 SUDHL4_400M_050219_1,6038,ALMDQVHHM False True ALMDQVHHM 31.299859 361.167529284954 1492956.75 6036.0 ENSG00000116497|ENST00000373475|S100PBP 9.516836166381836 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6039 31.31 581.0 140560.0 25 0 13483.0 + 1910 AMAQEGLREV 10 120 552.2800650438561 1102.545577154512 2 552.2804443240166 MULTI CID FTMS 0 0 0 6036 88878.65625 1.0 0 0.0 3 Unmodified _AMAQEGLREV_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 29.84058131909904 0.2982332456971691 5 {[DS]|[MA]|[CV]|TT}AQE 5 5 58.768 0.0 0.0 5.3302 0.0 0.0 0.0 569.3055227482305 569.3055227482305 46.54947189572098 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.3807196863200844 + {[DS]|[MA]|[CV]|TT}AQE 5.3302 + + 186 + 1 2.259 64817.2 1.0 1986 4051 6036 SUDHL4_400M_050219_1,6039 SUDHL4_400M_050219_1,6039,AMAQEGLREV False True AMAQEGLREV 31.310065 552.280444324017 415054.96875 6036.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 7.938162008921306 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6040 31.32 536.0 154770.0 25 0 28461.0 5205 DITKQPVVY 9 117 531.7943674092703 1061.5741818853403 2 532.2955810427666 MULTI CID FTMS 0 0 0 6036 91771.703125 0.7962479723152356 -2 0.0349483489990234 4 Unmodified _DITKQPVVY_ ENSG00000188342|ENST00000340473|GTF2F2 16.942295170755138 0.3780752226737986 5 VY 2 7 16.788 0.0 0.0 1.5814 0.0 0.0 781.431647560925 0.0 781.431647560925 0.0 5.528871982441359 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 + VY 1.5814 + + 251 + 1 2.259 71699.4 1.0 1987 4051 6036 SUDHL4_400M_050219_1,6040 SUDHL4_400M_050219_1,6040,DITKQPVVY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6042 31.337 800.0 163550.0 25 0 19612.0 28994 QDVYHHEHIED 11 142 711.3075970249783 1420.6006411167566 2 711.8034545779228 MULTI CID FTMS 0 0 0 6041 187536.296875 0.0093127135736796 22 -1.1903820037841797 1 Unmodified _QDVYHHEHIED_ ENSG00000243710|ENST00000372492|CFAP57 8.155526934196011 0.8366696279279818 5 [AG]DAHEAQQDA{M(Oxidation (M))|F} 12 10 96.594 0.0 0.0 6.7995 0.0 0.0 0.0 177.0720515994316 177.0720515994316 60.59775653519311 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.8441876774005248 1.5356668758921828 [AG]DAHEAQQDA{M(Oxidation (M))|F} 6.7995 - 26108 1 2.265 94379.5 0.8600000143051147 1988 4052 6041 SUDHL4_400M_050219_1,6042 SUDHL4_400M_050219_1,6042,QDVYHHEHIED False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6043 31.346 495.0 157270.0 25 0 27075.0 + 39365 VAGRAMTL 8 118 409.7309738968299 817.4473948604598 2 409.7314025759697 MULTI CID FTMS 0 0 0 6041 153060.53125 0.8318727534221355 -1 0.0368862152099609 2 Unmodified _VAGRAMTL_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 39.957323273325 0.2350051964751539 5 VA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}T{I|L} 8 2 + 53.51 0.0 0.0 6.546 6.546 92.705 0.0 0.0 0.0 31.57190309977331 5.450397039808763 5.450397039808763 10.529324278304912 0 0.9291746928241126 2.0 0.2614393726401688 0.0 VA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[SA]|[TG]}T{I|L};VA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}C(Carbamidomethyl (C))V{I|L};{[VA]|[{I|L}G]}{[NV]|[RG]}AMT{I|L} 6.546;5.2579;3.1489 -;-;+ + 75 + 1 2.265 63347.7 1.0 1989 4052 6041 SUDHL4_400M_050219_1,6043 SUDHL4_400M_050219_1,6043,VAGRAMTL False True VAGRAMTL 31.345949 409.73140257597 675862.0625 6041.0 ENSG00000013810|ENST00000313288|TACC3;;chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENST00000484651.5_1_4:1725148-1739714:+|nuORF 4.852581977844238 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6044 31.36 800.0 132510.0 25 0 10651.0 + -1 NMFCTRLSRCF 11 112 754.3330211637714 1506.651489394343 2 754.3329345583916 MULTI CID FTMS 0 0 0 6041 113770.546875 0.966890255068186 2 -0.1044731140136718 3 2 Carbamidomethyl (C),Oxidation (M) _NM(Oxidation (M))FC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 5.296884461304476 0.8501568894076437 5 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 71.234 0.0 0.0 4.728 0.0 0.0 493.2290516584 0.0 493.2290516584 0.0 52.77310937020445 0.0 0.0 0 1.2302046884880935 0.0 0.0 1.1307196863200843 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.728 - 1231 1 2.265 76476.8 0.6100000143051147 1990 4052 6041 SUDHL4_400M_050219_1,6044 SUDHL4_400M_050219_1,6044,NMFCTRLSRCF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6045 31.364 236.0 276250.0 25 0 22586.0 + 45338 YSMPSTHAM 9 100 512.7143598825719 1023.4141668319438 2 512.7140380740166 MULTI CID FTMS 0 0 0 6041 101843.75 0.2629007087993488 -4 0.1057147979736328 4 Unmodified _YSMPSTHAM_ ENSG00000126821|ENST00000247225|SGPP1 34.10243960390752 0.1078313939113124 5 {[{M(Oxidation (M))|F}C]|[YS]}MPSTHAM 9 0 + 32.388 0.0 0.0 3.1647 3.1647 78.027 0.0 0.0 0.0 4.600879154208826 4.600879154208826 4.600879154208826 4.600879154208826 0 0.5 0.0 0.4247425010840047 0.0 + + {[{M(Oxidation (M))|F}C]|[YS]}MPSTHAM;[YG]HTSPM[MT];{[{M(Oxidation (M))|F}C]|[YS]}M[YG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}MPS[HA]TM;{[{M(Oxidation (M))|F}C]|[YS]}M{[RE]|[WV]}HAM;{[{M(Oxidation (M))|F}C]|[YS]}M[YG]{[CT]|[{M(Oxidation (M))|F}G]}S{I|L};{[{M(Oxidation (M))|F}C]|[YS]}MP[WH]G{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}MPS[HC]S{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[HA]SPM[MT];{[{M(Oxidation (M))|F}C]|[YS]}[WY]AMG{M(Oxidation (M))|F} 3.1647;2.7151;2.5547;2.4425;2.3423;2.2106;2.1833;2.0821;1.993;1.6224 +;-;-;-;-;-;-;-;-;- + 376 + 1 2.265 56704.0 1.0 1991 4052 6041 SUDHL4_400M_050219_1,6045 SUDHL4_400M_050219_1,6045,YSMPSTHAM True True YSMPSTHAM 31.364223 512.714038074017 3338302.375 6041.0 ENSG00000126821|ENST00000247225|SGPP1 10.108514785766602 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6046 31.373 496.0 189000.0 25 0 17907.0 + 31290 RLYGNPNTL 9 145 524.2829381251082 1046.5513233170163 2 524.2833129763603 MULTI CID FTMS 0 0 0 6041 98096.984375 0.6873748576683892 -1 0.0368862152099609 5 Unmodified _RLYGNPNTL_ ENSG00000124659|ENST00000372876|TBCC 62.57269311338072 0.0246576765497938 5 [NP]T{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NT{I|L} 9 6 + 65.018 0.0 0.0 6.2126 6.2126 83.166 0.0 0.0 0.0 1.798573210722381 9.660677999045715 1.798573210722381 1.798573210722381 0 0.8252574989159953 0.8538719643217619 0.2887254899964357 0.9476212463643424 [NP]T{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NT{I|L};[{I|L}T]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PNT{I|L};[R{I|L}]YGNPNT{I|L};[{I|L}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NPNT{I|L};[{I|L}T]NP{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NT{I|L};[NP]T{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GGT{I|L};[{I|L}T]N{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PGGT{I|L};[{I|L}T]GG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PNT{I|L};[R{I|L}]YGGGPNT{I|L};[R{I|L}]YGNPGGT{I|L} 6.2126;6.0408;5.6151;5.5143;5.3894;5.3328;5.1609;4.922;4.7352;4.7352 -;-;+;-;-;-;-;-;-;- + 831 1 2.265 75842.0 1.0 1992 4052 6041 SUDHL4_400M_050219_1,6046 SUDHL4_400M_050219_1,6046,RLYGNPNTL True True RLYGNPNTL 31.372988 524.28331297636 652658.75 6041.0 ENSG00000124659|ENST00000372876|TBCC 6.401114304860433 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6047 31.379 335.0 428360.0 25 0 61353.0 + 44152 YLDPNQRDL 9 112 567.2831180925488 1132.5516832518974 2 567.2822753787041 MULTI CID FTMS 0 0 0 6041 126740.9765625 0.1637737536297488 -3 0.0718345642089843 6 Unmodified _YLDPNQRDL_ ENSG00000189144|ENST00000536220|ZNF573 66.45667989310934 0.0225072657982126 5 Y{I|L}DPNQ{[ES]|[DT]|[{I|L}C]}T 9 2 88.126 0.0 0.0 7.7812 0.0 0.0 0.0 82.0669191949828 82.0669191949828 61.332946754800375 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.7059771852360797 1.524227503252014 Y{I|L}DPNQ{[ES]|[DT]|[{I|L}C]}T 7.7812 - 673 + 1 2.265 107891.0 1.0 1993 4052 6041 SUDHL4_400M_050219_1,6047 SUDHL4_400M_050219_1,6047,YLDPNQRDL True True YLDPNQRDL 31.379063 567.282275378704 4258040.5 6041.0 ENSG00000189144|ENST00000536220|ZNF573 3.3898719946543374 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6049 31.395 800.0 134700.0 25 0 9849.3 + -1 NEKCRELDQFY 11 95 751.3400045574701 1500.6654561817402 2 751.3394653201103 MULTI CID FTMS 0 0 0 6048 105562.1875 0.2984971885687786 5 -0.3242092132568359 1 Carbamidomethyl (C) _NEKC(Carbamidomethyl (C))RELDQFY_ REV__ENSG00000105810|ENST00000424848|CDK6 12.240655878213236 0.7805268987462184 5 {[QG]|[NA]}G{[WT]|[RM]}MAQQNA{M(Oxidation (M))|F}Y 13 -1 + 74.883 0.0 0.0 4.99 4.99 77.508 0.0 0.0 0.0 0.3128982459781753 3.841994451130091 0.3128982459781753 0.3128982459781753 0 0.8182503180159344 0.958607314841775 0.2614393726401688 1.579689690656103 {[QG]|[NA]}G{[WT]|[RM]}MAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[ES]|[DT]|[{I|L}C]}MAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[QA]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}MAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[WT]|[RM]}MAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[WT]|[RM]}MA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[WT]|[RM]}MAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[ES]|[DT]|[{I|L}C]}MAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[ES]|[DT]|[{I|L}C]}MAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[ES]|[DT]|[{I|L}C]}MA[AG]QNA{M(Oxidation (M))|F}Y 4.99;4.9692;4.5859;4.5104;4.3855;4.3855;4.3855;4.3646;4.3646;4.3646 -;-;-;-;-;-;-;-;-;- 1566 1 2.265 79338.1 0.7599999904632568 1994 4053 6048 SUDHL4_400M_050219_1,6049 SUDHL4_400M_050219_1,6049,NEKCRELDQFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6050 31.398 117.0 386570.0 25 0 35729.0 + 32151 RVQEAIAEV 9 62 507.7829494382548 1013.5513459433096 2 507.7831909060478 MULTI CID FTMS 0 0 0 6048 179904.3125 0.3143846764298622 -2 0.0964469909667968 2 Unmodified _RVQEAIAEV_ ENSG00000119927|ENST00000348367|GPAM 23.78978130925829 0.2284941198415988 5 EA{I|L}AEV 6 3 44.399 0.0 0.0 4.3805 0.0 0.0 383.2273121564469 0.0 383.2273121564469 0.0 28.914412723804546 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + EA{I|L}AEV 4.3805 + + 98 1 2.265 43189.3 1.0 1995 4053 6048 SUDHL4_400M_050219_1,6050 SUDHL4_400M_050219_1,6050,RVQEAIAEV False True RVQEAIAEV 31.397879 507.783190906048 2606425.0 6048.0 ENSG00000119927|ENST00000348367|GPAM 5.282117366790772 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6051 31.407 494.0 301910.0 25 0 51723.0 -1 NSDERDCEMR 10 115 635.7415307049818 1269.4685084767634 2 635.7414428591728 MULTI CID FTMS 0 0 0 6048 170985.03125 0.352307808505746 -3 0.1110916137695312 3 Oxidation (M) _NSDERDCEM(Oxidation (M))R_ ENSG00000081479|ENST00000649046|LRP2 3.2813086475875832 0.7114585191678878 5 EEK{M(Oxidation (M))|F}{I|L}R 6 -1 43.633 0.0 0.0 3.4371 0.0 0.0 449.0248345181036 0.0 449.0248345181036 0.0 16.94537812595911 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 EEK{M(Oxidation (M))|F}{I|L}R 3.4371 - 483 + 1 2.265 111264.3 1.0 1996 4053 6048 SUDHL4_400M_050219_1,6051 SUDHL4_400M_050219_1,6051,NSDERDCEMR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6052 31.41 180.0 267700.0 25 0 20850.0 + -1 YLPCPSQLF 9 80 562.7741733299896 1123.533793726779 2 562.7736083865166 MULTI CID FTMS 0 0 0 6048 129135.3203125 1.0 0 0.0 4 Carbamidomethyl (C) _YLPC(Carbamidomethyl (C))PSQLF_ REV__ENSG00000115760|ENST00000421745|BIRC6;REV__ENST00000461788.1_1_2:32740825-32744123:+|nuORF 12.531546534597751 0.4974689918368763 5 D{I|L}K{M(Oxidation (M))|F} 4 -1 16.414 0.0 0.0 1.461 0.0 0.0 602.249803611525 0.0 602.249803611525 0.0 3.315468932362577 0.0 0.0 0 0.1989700043360188 0.0 0.4247425010840047 0.0 D{I|L}K{M(Oxidation (M))|F} 1.461 - 21 1 2.265 40689.5 1.0 1997 4053 6048 SUDHL4_400M_050219_1,6052 SUDHL4_400M_050219_1,6052,YLPCPSQLF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6053 31.424 800.0 60064.0 25 0 17644.0 -1 0 27 1193.781266620083 3578.321970460449 3 1194.115649402142 MULTI CID FTMS 0 0 0 6048 100583.8515625 0.9866191741132734 -1 0.0595607757568359 5 5 E 1 -1 6.9897 0.0 0.0 0.19533 0.0 0.0 2553.9142078645496 892.3430269830686 3446.2572348476183 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19533 - 7 + 1 2.265 49754.3 0.4099999964237213 1998 4053 6048 SUDHL4_400M_050219_1,6053 SUDHL4_400M_050219_1,6053, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6055 31.44 800.0 99599.0 25 0 9161.8 20935 LNEISEETTIQ 11 110 638.8181303158553 1275.6217076985106 2 638.8181640505791 MULTI CID FTMS 0 0 0 6054 69947.140625 0.1336745067087231 5 -0.4219684600830078 1 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 38.61474834105838 0.2337350513322792 5 {[QV]|[N{I|L}]|[RA]|[KV]}[YV][HA]DG{M(Oxidation (M))|F}{I|L}Q 11 7 + 55.768 0.0 0.0 4.3719 4.3719 76.078 0.0 0.0 0.0 2.221806183710747 2.221806183710747 2.221806183710747 0.5551732784983088 0 1.3494850021680094 1.3979400086720375 0.0 1.0114393726401687 {[QV]|[N{I|L}]|[RA]|[KV]}[YV][HA]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}[YV][WH]G{M(Oxidation (M))|F}{I|L}Q;{I|L}NACW[KA]{[ET]|[MV]}{I|L}Q;{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GE{I|L}N{[ET]|[MV]}{I|L}Q;{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}W{I|L}N{[ET]|[MV]}{I|L}Q;{I|L}[WM]E{I|L}N{[ET]|[MV]}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}[YV]N{I|L}E{[{M(Oxidation (M))|F}H]|[RQ]}Q;{[CA]|SS}{I|L}NW[KA]{[ET]|[MV]}{I|L}Q;[KA][WQ][PS]DG{M(Oxidation (M))|F}{I|L}Q;{[CA]|SS}[KA]W{I|L}N{[ET]|[MV]}{I|L}Q 4.3719;4.3283;4.1977;2.812;2.7685;2.7685;2.481;2.4789;2.4465;2.4241 -;-;-;-;-;-;-;-;-;- 613 1 2.265 67208.3 0.75 1999 4054 6054 SUDHL4_400M_050219_1,6055 SUDHL4_400M_050219_1,6055,LNEISEETTIQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6056 31.443 135.0 395890.0 25 0 21821.0 + 2493 AQYEHDLEVA 10 90 587.7725308899859 1173.5305088467717 2 587.7725097537041 MULTI CID FTMS 0 0 0 6054 324615.0 1.0 0 0.0 2 Unmodified _AQYEHDLEVA_ ENSG00000132341|ENST00000543796|RAN;ENST00000413691.2_1_4:174554896-174555010:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 19.361941925380144 0.5226674314761524 5 D{I|L}EVA 5 5 25.379 0.0 0.0 2.1627 0.0 0.0 628.2582874982437 0.0 628.2582874982437 0.0 14.542034810449293 0.0 0.0 0 0.5858955865873612 0.0 0.3807196863200844 0.0 + D{I|L}EVA 2.1627 + + 45 1 2.265 45165.0 1.0 2000 4054 6054 SUDHL4_400M_050219_1,6056 SUDHL4_400M_050219_1,6056,AQYEHDLEVA False True AQYEHDLEVA 31.44312 587.772509753704 1539368.875 6054.0 ENST00000413691.2_1_4:174554896-174555010:-|nuORF;;ENST00000455094.1_1_6:30454046-30454364:+|nuORF;;ENSG00000132341|ENST00000543796|RAN 6.354464689890544 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6057 31.446 140.0 342030.0 25 0 30979.0 + 39511 VATEKAVEL 9 100 480.2737824539565 958.5330119747132 2 480.2731201052666 MULTI CID FTMS 0 0 0 6054 168849.53125 0.1837497527642117 -3 0.1413593292236328 3 Unmodified _VATEKAVEL_ ENSG00000163931|ENST00000462138|TKT;ENST00000460243.1_1_3:53262881-53263452:-|nuORF;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT 22.736283301280096 0.2418982879461534 5 AV[NP]S{I|L} 6 7 23.408 0.0 0.0 2.4421 0.0 0.0 359.2042899061568 0.0 359.2042899061568 0.0 12.439385116655082 0.0 0.0 0 0.4247425010840047 0.0 0.9829535345634596 0.0 AV[NP]S{I|L} 2.4421 - 270 + 1 2.265 42404.8 1.0 2001 4054 6054 SUDHL4_400M_050219_1,6057 SUDHL4_400M_050219_1,6057,VATEKAVEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6058 31.46 800.0 111890.0 25 0 11964.0 -1 TLDECFQFY 9 106 611.7592598250692 1221.5039667169383 2 611.7597534060478 MULTI CID FTMS 0 0 0 6054 106020.734375 1.0 0 0.0 4 Carbamidomethyl (C) _TLDEC(Carbamidomethyl (C))FQFY_ ENSG00000154914|ENST00000285199|USP43;ENST00000573955.1_1_17:9604436-9604679:+|nuORF;nc|ENSG00000154914|Q70EL4-3|USP43;nc|ENSG00000154914|Q70EL4-4|USP43 20.453626601364224 0.2830276176381075 5 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 67.732 0.0 0.0 5.5449 5.5449 88.059 0.0 0.0 0.0 8.55697099291227 47.58146596900417 8.55697099291227 9.164539485499256 0 1.25 0.0 0.6549471895720984 0.6109243748081782 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;[HD]Q{[CP]|[EA]}QNA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}C]|[YS]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A{M(Oxidation (M))|F}Y;[HD]Q{[NV]|[RG]}DNA{M(Oxidation (M))|F}Y 5.5449;4.7947;4.7947;4.6062;4.0474;3.904;3.8589;3.8589;3.5395;3.2226 -;-;-;-;-;-;-;-;-;- 375 1 2.265 68906.6 0.6000000238418579 2002 4054 6054 SUDHL4_400M_050219_1,6058 SUDHL4_400M_050219_1,6058,TLDECFQFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6059 31.474 800.0 120600.0 25 0 12694.0 -1 0 110 604.3539421854161 603.3466657188161 1 604.3536254763603 MULTI CID FTMS 0 0 0 6054 103627.0625 0.2574276410610962 6 -0.4756526947021484 5 5 Y 1 -1 10.713 0.0 0.0 1.7757 0.0 0.0 422.2723076639317 0.0 422.2723076639317 0.0 1.839883926472972 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.7757 - 17 + 1 2.265 70712.3 0.6000000238418579 2003 4054 6054 SUDHL4_400M_050219_1,6059 SUDHL4_400M_050219_1,6059, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6060 31.487 800.0 87778.0 25 0 29027.0 -1 0 49 1024.0862125931635 3069.2368083796905 3 1024.422167956829 MULTI CID FTMS 0 0 0 6054 97658.8359375 1.0 0 0.0 6 5 MA[TP]{M(Oxidation (M))|F}T 6 -1 17.0 0.0 0.0 0.55388 0.0 0.0 2063.828974606952 354.1239412897094 2417.952915896661 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 MA[TP]{M(Oxidation (M))|F}T 0.55388 - 131 + 1 2.265 56563.9 0.4699999988079071 2004 4054 6054 SUDHL4_400M_050219_1,6060 SUDHL4_400M_050219_1,6060, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6062 31.496 257.0 236470.0 25 0 20467.0 + 31198 RLQEDPPVGV 10 96 555.3007814651523 1108.5870099971046 2 555.3000976443291 MULTI CID FTMS 0 0 0 6061 106862.2265625 0.3038729639632899 4 -0.3584804534912109 1 Unmodified _RLQEDPPVGV_ ENSG00000119048|ENST00000265339|UBE2B;ENST00000511807.1_1_5:133707262-133710155:+|nuORF 34.93206674587334 0.2110832994570416 5 [HS]T[KT]SP[VP]GV 11 6 + 41.633 0.0 0.0 3.7555 3.7555 74.507 0.0 0.0 0.0 0.642565216337708 0.642565216337708 0.642565216337708 0.642565216337708 0 2.138210492164445 0.0 0.3252574989159953 0.0 [HS]T[KT]SP[VP]GV;[PS]D{I|L}[QT]P[VP]GV;[HS]T[KT]SPRPV;[PS]D{I|L}[QT]P[RP]V;[HS]T[KT]SP[VG]PV;[HS]T[KT]SPRVP;[PS]D{I|L}[QT][RH]R;[HS]T[KT]SP[VG]VP;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}EDP[VP]GV;{[VA]|[{I|L}G]}{[QV]|[N{I|L}]|[RA]|[KV]}EDP[RP]V 3.7555;3.6976;3.6099;2.9928;2.7832;2.7607;2.4433;1.934;1.9136;1.2088 -;-;-;-;-;-;-;-;-;- 189 + 1 2.273 55684.9 1.0 2005 4055 6061 SUDHL4_400M_050219_1,6062 SUDHL4_400M_050219_1,6062,RLQEDPPVGV False True RLQEDPPVGV 31.496122 555.300097644329 4353709.5 6061.0 ENST00000511807.1_1_5:133707262-133710155:+|nuORF;;ENSG00000119048|ENST00000265339|UBE2B 7.950240770975749 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6063 31.497 34.0 1836500.0 25 0 275870.0 + 16122 ITSSAVTTALK 11 75 546.3189286769515 1090.6233044207029 2 546.3212158083916 MULTI CID FTMS 0 0 0 6061 1722725.25 0.1235790447387317 -2 0.1084003448486328 2 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 48.07275321834293 0.1283031204265279 5 {I|L}TSSAVTTA{I|L}K 11 0 + 106.62 0.0 0.0 9.7758 9.7758 99.666 0.0 0.0 0.0 89.58330329370449 15.209416533082615 15.209416533082615 106.61665139108918 0 0.4247425010840047 2.0 0.805462187404089 0.1643943297944484 + + {I|L}TSSAVTTA{I|L}K 9.7758 + + 126 + 1 2.273 53597.5 1.0 2006 4055 6061 SUDHL4_400M_050219_1,6063 SUDHL4_400M_050219_1,6063,ITSSAVTTALK False True ITSSAVTTALK 31.497302 546.321215808392 216772416.0 6061.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 9.014666557312012 2.0 True 11.0 False splicing PXD020620_cell_line SUDHL4_400M_050219_1 6064 31.5 128.0 596600.0 25 0 61413.0 + 25151 MQYPGRSL 8 86 476.2392331890442 950.4639134448884 2 476.2394286990166 MULTI CID FTMS 0 0 0 6061 335042.6875 0.7938239774487942 -1 0.0634880065917968 3 Unmodified _MQYPGRSL_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 39.957323273325 0.2350051964751539 5 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YPP 5 4 36.492 0.0 0.0 3.8394 0.0 0.0 0.0 331.1677645318969 331.1677645318969 31.00711233356286 0.0 0.0 0.0 0 0.8252574989159953 1.3010299956639813 0.0 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YPP 3.8394 - 92 + 1 2.273 66623.6 1.0 2007 4055 6061 SUDHL4_400M_050219_1,6064 SUDHL4_400M_050219_1,6064,MQYPGRSL False True MQYPGRSL 31.499916 476.239428699017 2447704.75 6061.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 3.761448343594869 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6065 31.514 800.0 202490.0 25 0 50776.0 -1 0 60 1174.7981290967668 3521.3725578905005 3 1175.134082019329 MULTI CID FTMS 0 0 0 6061 228854.390625 0.1514550361390527 -3 0.1679611206054687 4 5 {I|L}Q{M(Oxidation (M))|F}N{I|L}T 6 -1 24.097 0.0 0.0 0.6843 0.0 0.0 2346.836621466476 455.1910799615844 2802.02770142806 0.0 0.0 0.0 0.0 0 0.0 0.0 1.329689690656103 0.4247425010840047 {I|L}Q{M(Oxidation (M))|F}N{I|L}T 0.6843 - 415 + 1 2.273 134980.0 0.6399999856948853 2008 4055 6061 SUDHL4_400M_050219_1,6065 SUDHL4_400M_050219_1,6065, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6066 31.518 224.0 286770.0 25 0 25078.0 41704 VPSGASTGI 9 102 394.7119100429017 787.4092671526034 2 394.7107116580009 MULTI CID FTMS 0 0 0 6061 170284.71875 0.9259561951265516 -1 0.0634880065917968 5 Unmodified _VPSGASTGI_ ENSG00000074800|ENST00000234590|ENO1;ENSG00000108515|ENST00000519602|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENST00000486051.5_1_1:8930279-8934967:-|nuORF;ENST00000492343.1_1_1:8931941-8934967:-|nuORF;ENST00000519834.5_1_17:4855124-4857242:+|nuORF;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;ENST00000537838.5_1_12:7024996-7025840:+|nuORF;ENST00000539713.5_1_12:7024996-7026336:+|nuORF;nc|ENSG00000108515|P13929-2|ENO3;nc|ENSG00000108515|P13929-3|ENO3;nc|ENSG00000111674|P09104-2|ENO2 11.640296217721598 0.521594087909532 5 {[QN]|[E{I|L}]|[KN]}REE{I|L} 6 8 + 37.893 0.0 0.0 4.8123 4.8123 80.434 0.0 0.0 0.0 3.0102999566398125 16.197887582883936 3.0102999566398125 3.0102999566398125 0 0.4247425010840047 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}REE{I|L};{[RE]|[WV]}{I|L}EE{I|L};[VP]S{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L} 4.8123;4.43;2.5427 -;-;- 87 1 2.273 56468.4 1.0 2009 4055 6061 SUDHL4_400M_050219_1,6066 SUDHL4_400M_050219_1,6066,VPSGASTGI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6067 31.532 800.0 188430.0 25 0 12557.0 6775 EEADWIYRNAF 11 154 707.3234526172524 1412.6323523013048 2 707.3220703005791 MULTI CID FTMS 0 0 0 6061 138043.46875 0.3124883322431047 -2 0.1084003448486328 6 Unmodified _EEADWIYRNAF_ ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 24.99096001346401 0.505407273373304 5 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F} 12 7 + 104.4 0.0 0.0 7.3907 7.3907 86.959 0.0 0.0 0.0 3.4110424363209404 62.39791268290109 3.4110424363209404 2.90034611362519 0 1.4991348669726232 0.0 0.5629529932484498 2.99607625286837 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}G{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}G[HV]QEAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}G{[MS]|[{M(Oxidation (M))|F}A]}AQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}G{[MS]|[{M(Oxidation (M))|F}A]}AQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}G{[MS]|[{M(Oxidation (M))|F}A]}A[AG]QNA{M(Oxidation (M))|F} 7.3907;7.1854;7.0721;6.9991;6.7467;6.7467;6.7467;6.5432;6.5432;6.5432 -;-;-;-;-;-;-;-;-;- 13727 1 2.273 111931.1 0.699999988079071 2010 4055 6061 SUDHL4_400M_050219_1,6067 SUDHL4_400M_050219_1,6067,EEADWIYRNAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6068 31.538 359.0 178620.0 25 0 14401.0 + 1959 AMPPPPPQGV 10 106 495.7575038734756 0 495.7574340701103 PEAK CID FTMS 0 0 0 6061 86412.8125 0.3041779881402694 91 -3.085897445678711 7 Unmodified _AMPPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 48.345845343767074 0.0580028052695927 5 PP 2 8 11.964 0.0 0.0 1.2091 0.0 0.0 202.0809124326949 590.2957371657207 792.3766495984155 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 + PP 1.2091 + + 173 + 1 2.273 53419.7 1.0 2011 4055 6061 SUDHL4_400M_050219_1,6068 SUDHL4_400M_050219_1,6068,AMPPPPPQGV True True AMPPPPPQGV 31.538293 495.75743407011 16974940.0 6061.0 ENSG00000164754|ENST00000297338|RAD21;;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 7.249810377756755 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6070 31.543 92.0 552750.0 25 0 74716.0 -1 ASYLCLLP 8 77 468.7484883388564 935.4824237445127 2 468.7486450076103 MULTI CID FTMS 0 0 0 6069 467679.03125 0.3797906743484947 3 -0.3078842163085937 1 Carbamidomethyl (C) _ASYLC(Carbamidomethyl (C))LLP_ ENSG00000021776|ENST00000156471|AQR 19.438996006549623 0.6237395211498085 5 {[SA]|[TG]}P 3 -1 23.222 0.0 0.0 2.4823 0.0 0.0 0.0 677.3361584459378 677.3361584459378 7.318897249564918 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[SA]|[TG]}P 2.4823 - 98 1 2.273 46355.0 1.0 2012 4056 6069 SUDHL4_400M_050219_1,6070 SUDHL4_400M_050219_1,6070,ASYLCLLP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6071 31.546 163.0 378060.0 25 0 71808.0 + 17074 KLDQDLNEV 9 97 537.2785017947318 1072.5424506562636 2 537.2781249880791 MULTI CID FTMS 0 0 0 6069 242526.546875 0.305962834946309 3 -0.3078842163085937 2 Unmodified _KLDQDLNEV_ ENSG00000108055|ENST00000361804|SMC3 24.99096001346401 0.2132109383330889 5 {[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}K{I|L}NE 8 4 41.605 0.0 0.0 3.8791 0.0 0.0 0.0 114.06203825139212 114.06203825139212 22.00109420336375 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.6747425010840047 {[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}K{I|L}NE 3.8791 - 163 1 2.273 52684.2 1.0 2013 4056 6069 SUDHL4_400M_050219_1,6071 SUDHL4_400M_050219_1,6071,KLDQDLNEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6072 31.549 134.0 390210.0 25 0 34746.0 + 42460 VTGLCIVK 8 91 416.75152081437096 0 416.7515136599541 PEAK CID FTMS 0 0 0 6069 273639.03125 0.9347692414772868 1 -0.0613479614257812 3 Unmodified _VTGLCIVK_ REV__ENSG00000222011|ENST00000413034|FAM185A;REV__nc|ENSG00000222011|Q8N0U4-3|FAM185A 13.50788311687929 0.5021269579892848 5 KT 2 -1 9.464 0.0 0.0 1.1382 0.0 0.0 82.0080969440648 517.3146456354124 599.3227425794772 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KT 1.1382 - 94 + 1 2.273 47109.0 1.0 2014 4056 6069 SUDHL4_400M_050219_1,6072 SUDHL4_400M_050219_1,6072,VTGLCIVK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6073 31.552 184.0 342760.0 25 0 64483.0 + 37766 TLRRPGSL 8 89 450.2734311504478 0 450.2745239138603 PEAK CID FTMS 0 0 0 6069 224949.1875 1.0 0 0.0 4 Unmodified _TLRRPGSL_ REV__ENSG00000162572|ENST00000379116|SCNN1D 9.347437153973935 0.5488964601725408 5 TT 2 -1 9.5083 0.0 0.0 1.0582 0.0 0.0 565.3350570257019 128.07221399478752 693.4072710204894 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 TT 1.0582 - 12 + 1 2.273 56993.9 1.0 2015 4056 6069 SUDHL4_400M_050219_1,6073 SUDHL4_400M_050219_1,6073,TLRRPGSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6074 31.554 78.0 647560.0 25 0 52622.0 + -1 LQDLCQSL 8 94 488.7406478528214 975.4667427724428 2 488.7404968142509 MULTI CID FTMS 0 0 0 6069 192329.890625 0.886209868755172 -1 0.0505962371826171 5 Carbamidomethyl (C) _LQDLC(Carbamidomethyl (C))QSL_ REV__ENSG00000135913|ENST00000258399|USP37;REV__nc|ENSG00000135913|Q86T82-2|USP37 18.13498045792455 0.6430038125133779 5 [{I|L}A]G 3 -1 24.181 0.0 0.0 2.4789 0.0 0.0 0.0 731.3002290607818 731.3002290607818 9.64719041932895 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]G 2.4789 - 241 1 2.273 43756.4 1.0 2016 4056 6069 SUDHL4_400M_050219_1,6074 SUDHL4_400M_050219_1,6074,LQDLCQSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6075 31.56 351.0 310990.0 25 0 46124.0 + 19735 LGPPRLAPG 9 105 439.2665232806816 876.5184936281631 2 439.2667724490166 MULTI CID FTMS 0 0 0 6069 180541.6875 0.0274416289450392 106 -3.2173614501953125 6 Unmodified _LGPPRLAPG_ REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF 16.942295170755138 0.3780752226737986 5 {[VA]|[{I|L}G]}PPA 5 -1 41.12 0.0 0.0 4.6913 0.0 0.0 0.0 438.24738489322505 438.24738489322505 29.33741914401884 0.0 0.0 0.0 0 0.2396518287104437 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.6913 - 163 + 1 2.273 89076.6 1.0 2017 4056 6069 SUDHL4_400M_050219_1,6075 SUDHL4_400M_050219_1,6075,LGPPRLAPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6076 31.567 387.0 167230.0 25 0 10986.0 + 13425 HLPDGSVTV 9 103 462.7425267527118 923.4705005722236 2 462.7435485720634 MULTI CID FTMS 0 0 0 6069 122245.0390625 0.8047817434682892 3 -0.3078842163085937 7 Unmodified _HLPDGSVTV_ ENSG00000127054|ENST00000435064|INTS11;ENST00000470030.6_1_1:1247241-1248711:-|nuORF;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11 44.40701690623563 0.0526327925666318 5 TV 2 7 22.945 0.0 0.0 2.4847 0.0 0.0 705.3433623659721 0.0 705.3433623659721 0.0 0.2692501919536738 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 + TV 2.4847 + + 117 + 1 2.273 58533.6 1.0 2018 4056 6069 SUDHL4_400M_050219_1,6076 SUDHL4_400M_050219_1,6076,HLPDGSVTV True True HLPDGSVTV 31.56737 462.743548572063 3727810.25 6069.0 nc|ENSG00000127054|Q5TA45-4|INTS11;;ENSG00000127054|ENST00000435064|INTS11;;nc|ENSG00000127054|Q5TA45-2|INTS11;;nc|ENSG00000127054|Q5TA45-3|INTS11;;nc|ENSG00000127054|Q5TA45-5|INTS11;;ENST00000470030.6_1_1:1247241-1248711:-|nuORF 5.026803016662598 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6077 31.581 800.0 215070.0 25 0 24783.0 + 17564 KPQNERILL 9 135 555.8349341041535 0 555.8347045779228 PEAK CID FTMS 0 0 0 6069 110698.8203125 0.5198896147405775 -2 0.114084243774414 8 Unmodified _KPQNERILL_ REV__ENSG00000115616|ENST00000233969|SLC9A2 41.8396318013385 0.053988301646488 5 PTQ 3 -1 29.935 0.0 0.0 2.6977 0.0 0.0 128.09363544560784 652.3800753229124 780.4737107685203 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.75 0.0 PTQ 2.6977 - 357 + 1 2.273 131710.2 0.5799999833106995 2019 4056 6069 SUDHL4_400M_050219_1,6077 SUDHL4_400M_050219_1,6077,KPQNERILL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6078 31.595 800.0 60739.0 25 0 3818.2 20982 LNNWHQEFTRF 11 81 746.3623639795983 1490.7101750259965 2 746.8627197146416 MULTI CID FTMS 0 0 0 6069 101328.4453125 1.0 0 0.0 9 Unmodified _LNNWHQEFTRF_ ENSG00000128908|ENST00000648947|INO80;ENST00000561172.1_1_15:41361731-41364163:-|nuORF 13.614867670302877 0.751941774060705 5 {[QV]|[N{I|L}]|[RA]|[KV]}NE 4 7 43.716 0.0 0.0 2.9326 0.0 0.0 0.0 1017.4706480086714 1017.4706480086714 29.23516269895728 0.0 0.0 0.0 0 1.305462187404089 2.0 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}NE 2.9326 - 204 1 2.273 41535.0 0.6100000143051147 2020 4056 6069 SUDHL4_400M_050219_1,6078 SUDHL4_400M_050219_1,6078,LNNWHQEFTRF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6079 31.6 258.0 205910.0 25 0 21921.0 + 3522 CTILVTPDTP 10 82 530.2739828182475 1058.533412703295 2 530.2737304568291 MULTI CID FTMS 0 0 0 6069 105111.9609375 0.975637508024664 2 -0.1652126312255859 10 Unmodified _CTILVTPDTP_ REV__ENSG00000125746|ENST00000245925|EML2;REV__ENST00000588000.5_1_19:46124203-46142634:-|nuORF;REV__nc|ENSG00000125746|O95834-2|EML2;REV__nc|ENSG00000125746|O95834-3|EML2 9.38312468134398 0.6832340498775793 5 DTP 3 -1 15.393 0.0 0.0 1.4541 0.0 0.0 727.40177315427 0.0 727.40177315427 0.0 2.689549981487078 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 DTP 1.4541 + + 82 + 1 2.273 46209.1 1.0 2021 4056 6069 SUDHL4_400M_050219_1,6079 SUDHL4_400M_050219_1,6079,CTILVTPDTP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6081 31.616 800.0 179060.0 25 0 21174.0 -1 ENLQTEIQEME 11 152 711.3075970249783 1420.6006411167566 2 711.8023559451103 MULTI CID FTMS 0 0 0 6080 264427.0625 0.0131309700320752 27 -1.1757316589355469 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))ENLQTEIQEM(Oxidation (M))E_ ENSG00000165487|ENST00000382374|MICU2;ENST00000460488.5_1_13:22069439-22077232:-|nuORF;ENST00000480341.5_1_13:22077016-22089705:-|nuORF 12.240655878213236 0.7805268987462184 5 {M(Oxidation (M))|F}AGGEQA[HD]{M(Oxidation (M))|F}Y 11 -1 84.589 0.0 0.0 5.9545 0.0 0.0 180.0820386771066 0.0 180.0820386771066 0.0 55.51679131622802 0.0 0.0 0 0.3054621874040891 0.0 1.8098943791441968 1.1989700043360187 {M(Oxidation (M))|F}AGGEQA[HD]{M(Oxidation (M))|F}Y 5.9545 - 42722 + 1 2.273 104149.7 0.6700000166893005 2022 4057 6080 SUDHL4_400M_050219_1,6081 SUDHL4_400M_050219_1,6081,ENLQTEIQEME False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6082 31.619 161.0 579590.0 25 0 66517.0 + 17289 KLQEKIQEL 9 115 564.8346435942785 1127.654734255357 2 564.8345825076103 MULTI CID FTMS 0 0 0 6080 264527.125 0.5813196856251032 -1 0.0613479614257812 2 Unmodified _KLQEKIQEL_ ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE 91.08480475639789 0.0145488605211996 5 K{I|L}QE{I|L}KQE{I|L} 9 2 + 64.348 0.0 0.0 5.7063 5.7063 89.894 0.0 0.0 0.0 52.12923242075317 3.5350802795635445 3.5350802795635445 9.208187539523763 0 2.24084277615946 0.6575773191777937 1.6307196863200843 0.3807196863200844 K{I|L}QE{I|L}KQE{I|L};K{I|L}QE{I|L}K[AG]E{I|L};K{I|L}[AG]E{I|L}KQE{I|L} 5.7063;4.8898;4.8898 -;-;- 978 + 1 2.273 76002.1 1.0 2023 4057 6080 SUDHL4_400M_050219_1,6082 SUDHL4_400M_050219_1,6082,KLQEKIQEL True True SMYGVDLHHA 31.618963 564.83458250761 1152258.75 6080.0 nc|ENSG00000079819|O43491-3|EPB41L2;;ENSG00000088367|ENST00000338074|EPB41L1;;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;;ENST00000578432.2_1_18:5429333-5433551:-|nuORF;;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;;ENSG00000079819|ENST00000337057|EPB41L2;;ENST00000581757.1_1_18:5431369-5434107:-|nuORF;;nc|ENSG00000079819|O43491-4|EPB41L2;;nc|ENSG00000079819|O43491-2|EPB41L2;;ENSG00000082397|ENST00000341928|EPB41L3;;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;;nc|ENSG00000082397|Q9Y2J2-3|EPB41L3;;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3 4.569793224334717 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6083 31.622 171.0 323110.0 25 0 17484.0 + 30876 RINPQTTEF 9 91 553.2844455694909 1104.5543382057815 2 553.2842285037041 MULTI CID FTMS 0 0 0 6080 228918.0625 0.6019423203847499 -1 0.0613479614257812 3 Unmodified _RINPQTTEF_ ENSG00000138231|ENST00000260803|DBR1;nc|ENSG00000138231|Q9UK59-2|DBR1 34.40172386719151 0.1061884637610825 5 TTE{M(Oxidation (M))|F} 4 5 37.735 0.0 0.0 3.4163 0.0 0.0 608.3403769566729 0.0 608.3403769566729 0.0 14.776296993281406 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 + TTE{M(Oxidation (M))|F} 3.4163 + + 126 1 2.273 48769.3 1.0 2024 4057 6080 SUDHL4_400M_050219_1,6083 SUDHL4_400M_050219_1,6083,RINPQTTEF True True RINPQTTEF 31.622303 553.284228503704 2076475.625 6080.0 nc|ENSG00000138231|Q9UK59-2|DBR1;;ENSG00000138231|ENST00000260803|DBR1 7.232287565867106 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6084 31.636 800.0 61887.0 25 0 4517.4 + -1 NMFCTRLSRCF 11 75 754.3330211637714 1506.651489394343 2 754.8347045779228 MULTI CID FTMS 0 0 0 6080 90919.9765625 0.7667846187621183 3 -0.3002204895019531 4 2 Carbamidomethyl (C),Oxidation (M) _NM(Oxidation (M))FC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 1.3295316138638542 0.8688751186870782 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NADQ 9 -1 43.466 0.0 0.0 2.8849 0.0 0.0 0.0 490.2076510065063 490.2076510065063 32.49668131245279 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NADQ 2.8849 - 156 + 1 2.273 39113.4 0.5799999833106995 2025 4057 6080 SUDHL4_400M_050219_1,6084 SUDHL4_400M_050219_1,6084,NMFCTRLSRCF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6085 31.639 115.0 517930.0 25 0 42318.0 + 31373 RNSMKAASL 9 115 489.26161348457697 976.508674035954 2 489.2619201540947 MULTI CID FTMS 0 0 0 6080 250293.15625 1.0 0 0.0 5 Unmodified _RNSMKAASL_ REV__ENST00000504975.1_1_4:76911880-76912009:-|nuORF 14.838274106304384 0.4350285940865338 5 [Q{I|L}]V{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L} 8 -1 [Q{I|L}] + + 18.123 15.322 6.354 1.8559 1.8559 52.781 0.0 0.0 0.0 0.0 3.725711404236968 0.0 0.0 0 1.0 0.0 0.2887254899964357 0.0 [Q{I|L}]V{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L} 1.8559 - 290 + 1 2.273 49200.4 1.0 2026 4057 6080 SUDHL4_400M_050219_1,6085 SUDHL4_400M_050219_1,6085,RNSMKAASL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6086 31.642 167.0 433180.0 25 0 67893.0 + 11827 GLPGHLTE 8 92 412.2198580069468 822.4251630806936 2 412.2192565798759 MULTI CID FTMS 0 0 0 6080 164039.015625 0.6749571630150757 2 -0.2465362548828125 6 Unmodified _GLPGHLTE_ REV__ENSG00000163646|ENST00000327047|CLRN1;REV__nc|ENSG00000163646|P58418-1|CLRN1;REV__nc|ENSG00000163646|P58418-4|CLRN1 28.17323086031832 0.4514957916281387 5 [H{I|L}][NP]{I|L}TE 7 -1 + 35.474 0.0 0.0 4.3134 4.3134 82.009 0.0 0.0 0.0 6.478174818886373 9.399626841502258 6.478174818886373 6.478174818886373 0 0.6989700043360187 1.5228787452803376 0.0 0.0 [H{I|L}][NP]{I|L}TE;[NP]{I|L}H{I|L}TE 4.3134;3.5257 -;- 57 1 2.273 63146.6 1.0 2027 4057 6080 SUDHL4_400M_050219_1,6086 SUDHL4_400M_050219_1,6086,GLPGHLTE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6087 31.646 203.0 387490.0 25 0 29095.0 13228 HHKVRPYQV 9 117 388.5519052797816 0 388.5519897341728 PEAK CID FTMS 0 0 0 6080 182055.234375 0.7112585328333814 -1 0.0613479614257812 7 Unmodified _HHKVRPYQV_ ENSG00000134014|ENST00000256398|ELP3;nc|ENSG00000134014|Q9H9T3-2|ELP3;nc|ENSG00000134014|Q9H9T3-4|ELP3;nc|ENSG00000134014|Q9H9T3-5|ELP3 8.155526934196011 0.3334291183486324 5 Y 1 8 6.9897 0.0 0.0 0.90179 0.0 0.0 528.9517587023383 80.05140100650624 609.0031597088446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.90179 + + 38 + 1 2.273 66975.7 1.0 2028 4057 6080 SUDHL4_400M_050219_1,6087 SUDHL4_400M_050219_1,6087,HHKVRPYQV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6088 31.655 488.0 334370.0 25 0 24572.0 + 18134 KTLVVKNWT 9 195 363.553370507309 1087.6382821221273 3 363.5537292361259 MULTI CID FTMS 0 0 0 6080 150391.328125 1.0 0 0.0 8 Unmodified _KTLVVKNWT_ REV__ENSG00000153207|ENST00000648844|AHCTF1;REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF;REV__nc|ENSG00000153207|Q8WYP5-2|AHCTF1;REV__nc|ENSG00000153207|Q8WYP5-3|AHCTF1 9.243775137331635 0.591988661348691 5 VV{M(Oxidation (M))|F}PER 6 -1 43.109 0.0 0.0 3.9636 0.0 0.0 342.22602994123025 0.0 342.22602994123025 0.0 31.496840720407874 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 VV{M(Oxidation (M))|F}PER 3.9636 - 173 + 1 2.273 130321.3 1.0 2029 4057 6080 SUDHL4_400M_050219_1,6088 SUDHL4_400M_050219_1,6088,KTLVVKNWT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6089 31.669 800.0 123030.0 25 0 7286.8 + -1 DEKYMRTGYFY 11 124 744.8269804945646 1487.6394080559292 2 745.3259155154228 MULTI CID FTMS 0 0 0 6080 138285.53125 1.0 0 0.0 9 Oxidation (M) _DEKYM(Oxidation (M))RTGYFY_ REV__ENSG00000099954|ENST00000262608|CECR2;REV__nc|ENSG00000099954|Q9BXF3-2|CECR2;REV__nc|ENSG00000099954|Q9BXF3|CECR2 9.38312468134398 0.8308777417566128 5 {[QV]|[N{I|L}]|[RA]|[KV]}{[MG]|[TS]}{[QC]|[C(Carbamidomethyl (C))A]}AQENA[Y{M(Oxidation (M))|F}] 13 -1 + 58.103 0.0 0.0 3.9057 3.9057 81.565 0.0 0.0 0.0 5.122216154897394 37.69737240998278 5.122216154897394 7.375778083851152 0 0.8494850021680094 2.0 0.3807196863200844 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}{[MG]|[TS]}{[QC]|[C(Carbamidomethyl (C))A]}AQENA[Y{M(Oxidation (M))|F}];{[DA]|[EG]}{M(Oxidation (M))|F}[PS]EAQENA[Y{M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}{[MG]|[TS]}{[QC]|[C(Carbamidomethyl (C))A]}AQQW[Y{M(Oxidation (M))|F}];[Q{I|L}][{M(Oxidation (M))|F}E]EAQENA[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQENA[Y{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}D[PS]EAQENA[Y{M(Oxidation (M))|F}];{[CT]|[{M(Oxidation (M))|F}G]}E[PS]EAQENA[Y{M(Oxidation (M))|F}];{[DA]|[EG]}{M(Oxidation (M))|F}[PS]EAQEGGA[Y{M(Oxidation (M))|F}];{[DA]|[EG]}{M(Oxidation (M))|F}[PS]EA[AG]ENA[Y{M(Oxidation (M))|F}];{[DA]|[EG]}{M(Oxidation (M))|F}[PS]EAQQW[Y{M(Oxidation (M))|F}] 3.9057;3.4099;3.2569;3.1099;3.0058;2.9943;2.8602;2.8001;2.8001;2.7611 -;-;-;-;-;-;-;-;-;- 3262 1 2.273 72525.9 0.6899999976158142 2030 4057 6080 SUDHL4_400M_050219_1,6089 SUDHL4_400M_050219_1,6089,DEKYMRTGYFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6090 31.675 310.0 303000.0 25 0 76852.0 -1 0 82 492.262759316013 491.255482849413 1 492.2630493044853 MULTI CID FTMS 0 0 0 6080 126947.03125 0.6999010873840671 1 -0.1038646697998046 10 5 Y 1 -1 13.979 0.0 0.0 2.8456 0.0 0.0 310.1805297017552 0.0 310.1805297017552 0.0 2.095150145426313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.8456 - 37 + 1 2.273 77855.8 1.0 2031 4057 6080 SUDHL4_400M_050219_1,6090 SUDHL4_400M_050219_1,6090, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6091 31.689 800.0 30598.0 25 0 7335.9 -1 0 34 1182.456103503704 0 1182.456103503704 PEAK CID FTMS 0 0 0 -1 0 11 5 Q 1 -1 4.6041 0.0 0.0 0.19485 0.0 0.0 1417.4956287829957 814.3039034479124 2231.799532230908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.19485 - 6 + 1 2.273 29620.4 0.4300000071525574 2032 4057 6080 SUDHL4_400M_050219_1,6091 SUDHL4_400M_050219_1,6091, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6092 31.704 800.0 86678.0 25 0 23023.0 + -1 LMGWCPRQQIV 11 99 702.3499892088747 0 702.3522216677666 PEAK CID FTMS 0 0 0 6080 92773.234375 1.0 0 0.0 12 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))GWC(Carbamidomethyl (C))PRQQIV_ REV__ENST00000403558.1_1_11:57367676-57367742:+|nuORF 6.2057823575117 0.47618401536486 5 PYD 3 -1 14.693 0.0 0.0 1.0475 0.0 0.0 899.4463525052817 125.0726259820922 1024.518978487374 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PYD 1.0475 - 198 + 1 2.273 54261.2 0.6100000143051147 2033 4057 6080 SUDHL4_400M_050219_1,6092 SUDHL4_400M_050219_1,6092,LMGWCPRQQIV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6094 31.709 139.0 292950.0 25 0 38786.0 + 39512 VATEKAVEL 9 74 480.2737824539565 958.5330119747132 2 480.2739745974541 MULTI CID FTMS 0 0 0 6093 360579.53125 0.3923990740662649 1 -0.1426715850830078 1 Unmodified _VATEKAVEL_ ENSG00000163931|ENST00000462138|TKT;ENST00000460243.1_1_3:53262881-53263452:-|nuORF;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT 24.99096001346401 0.2132109383330889 5 {[VA]|[{I|L}G]}TSAVAV{[QN]|[E{I|L}]|[KN]} 10 3 + 62.612 0.0 0.0 6.5321 6.5321 94.104 0.0 0.0 0.0 22.78151250383643 48.00820653692661 22.78151250383643 20.49926291259105 0 0.5 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}TSAVAV{[QN]|[E{I|L}]|[KN]};{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VAV{[QN]|[E{I|L}]|[KN]};{[VA]|[{I|L}G]}TS[Q{I|L}]V{[QN]|[E{I|L}]|[KN]};{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[R{I|L}]{[QN]|[E{I|L}]|[KN]};[KA]{[ET]|[MV]}VAV{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[R{I|L}]AS[PG]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[H{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}{I|L};[KA]{[ET]|[MV]}[R{I|L}]{[QN]|[E{I|L}]|[KN]} 6.5321;4.3935;4.0794;2.3896;2.0447;0.78853;0.38029;0.040829 -;-;-;-;-;-;-;- 387 1 2.259 39353.8 1.0 2034 4058 6093 SUDHL4_400M_050219_1,6094 SUDHL4_400M_050219_1,6094,VATEKAVEL False True VATEKAVEL 31.70945 480.273974597454 4575118.5 6093.0 ENST00000461139.5_1_3:53259774-53265639:-|nuORF;;nc|ENSG00000163931|P29401-2|TKT;;ENST00000460243.1_1_3:53262881-53263452:-|nuORF;;ENSG00000163931|ENST00000462138|TKT;;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;;ENST00000460343.5_1_3:53261754-53265639:-|nuORF 2.348677118619283 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6095 31.715 277.0 205280.0 25 0 10716.0 + 44166 YLDRFYEK 8 96 567.2831180925488 1132.5516832518974 2 567.2830688357353 MULTI CID FTMS 0 0 0 6093 63418.1171875 0.0819484225356776 3 -0.2660446166992187 2 Unmodified _YLDRFYEK_ REV__ENSG00000187555|ENST00000344836|USP7;REV__ENST00000565455.5_1_16:8987857-9023250:-|nuORF;REV__ENST00000569448.1_1_16:8993400-8995074:-|nuORF;REV__nc|ENSG00000187555|Q93009-3|USP7 11.640296217721598 0.738950129755968 5 [Y{I|L}]D 3 -1 33.952 0.0 0.0 2.9979 0.0 0.0 0.0 738.3569377816154 738.3569377816154 19.973024840566467 0.0 0.0 0.0 0 0.6505149978319906 2.0 0.0 0.0 [Y{I|L}]D 2.9979 + + 81 + 1 2.259 47539.5 1.0 2035 4058 6093 SUDHL4_400M_050219_1,6095 SUDHL4_400M_050219_1,6095,YLDRFYEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6096 31.716 66.0 653320.0 25 0 73177.0 + 16871 KIFDGCPPPL 10 78 543.7858925178579 0 543.7866088747978 PEAK CID FTMS 0 0 0 6093 381389.84375 1.0 0 0.0 3 Unmodified _KIFDGCPPPL_ REV__ENST00000331594.6_19:52196686-52197501:+|nuORF 5.731851221503515 0.3961065659209837 5 {I|L} 1 -1 11.99 0.0 0.0 1.1045 0.0 0.0 844.3777867673579 125.07259546451408 969.450382231872 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 1.1045 + + 13 + 1 2.259 39896.3 1.0 2036 4058 6093 SUDHL4_400M_050219_1,6096 SUDHL4_400M_050219_1,6096,KIFDGCPPPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6097 31.719 114.0 760970.0 25 0 88800.0 + 24830 MPKLGKARLI 10 82 376.2423210585141 1125.7051337757423 3 376.2420532107353 MULTI CID FTMS 0 0 0 6093 360973.71875 0.5675697999043041 -1 0.1038646697998046 4 Unmodified _MPKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 6.2057823575117 0.6979311171683138 5 MPQK{I|L}K 6 -1 40.495 0.0 0.0 3.5973 0.0 0.0 0.0 397.2572546937471 397.2572546937471 29.07473567538384 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 MPQK{I|L}K 3.5973 - 50 + 1 2.259 76188.6 1.0 2037 4058 6093 SUDHL4_400M_050219_1,6097 SUDHL4_400M_050219_1,6097,MPKLGKARLI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6098 31.731 713.0 228670.0 25 0 23736.0 + 17359 KLYQRDLEV 9 145 582.3247590698072 1162.6349652064143 2 582.3245117068291 MULTI CID FTMS 0 0 0 6093 220998.09375 1.0 0 0.0 5 Unmodified _KLYQRDLEV_ ENSG00000111247|ENST00000352618|RAD51AP1;nc|ENSG00000111247|Q96B01-3|RAD51AP1;nc|ENSG00000111247|Q96B01|RAD51AP1 57.10758569107544 0.0276834916274374 5 K{I|L}YQW[{M(Oxidation (M))|F}T]{I|L} 8 5 40.839 0.0 0.0 3.5126 0.0 0.0 0.0 80.05147730045155 80.05147730045155 1.3566032266867012 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3494850021680094 0.0 K{I|L}YQW[{M(Oxidation (M))|F}T]{I|L} 3.5126 - 421 + 1 2.259 123223.5 1.0 2038 4058 6093 SUDHL4_400M_050219_1,6098 SUDHL4_400M_050219_1,6098,KLYQRDLEV True True KLYQRDLEV 31.730957 582.3254 1189950.875 6093.0 nc|ENSG00000111247|Q96B01|RAD51AP1;;nc|ENSG00000111247|Q96B01-3|RAD51AP1;;ENSG00000111247|ENST00000352618|RAD51AP1 5.850027561187744 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6099 31.744 735.0 187040.0 25 0 11905.0 + 31325 RMKQVEELY 9 152 598.3097655583622 1194.6049781835245 2 598.3105956912041 MULTI CID FTMS 0 0 0 6093 220694.640625 1.0 0 0.0 6 Unmodified _RMKQVEELY_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 74.92900055777586 0.0191935851694334 5 {[QN]|[E{I|L}]|[KN]}{[TV]|[{I|L}S]}TEVE{I|L}Y 10 5 + 76.065 0.0 0.0 6.3674 6.3674 85.604 0.0 0.0 0.0 4.998774732165998 15.026975159433531 4.998774732165998 3.5906717222802342 0 0.5 1.5228787452803376 1.661954370472159 1.256142047872684 {[QN]|[E{I|L}]|[KN]}{[TV]|[{I|L}S]}TEVE{I|L}Y;{[QN]|[E{I|L}]|[KN]}{[TV]|[{I|L}S]}T{I|L}DE{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T]TEVE{I|L}Y;{[WT]|[RM]}KQEVE{I|L}Y;{[QN]|[E{I|L}]|[KN]}{[TV]|[{I|L}S]}TVEE{I|L}Y;{[QN]|[E{I|L}]|[KN]}{[TV]|[{I|L}S]}TE{I|L}D{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T]T{I|L}DE{I|L}Y;{[WT]|[RM]}KQ{I|L}DE{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}[{I|L}T]TVEE{I|L}Y;{[WT]|[RM]}KQVEE{I|L}Y 6.3674;6.0668;5.9489;5.8827;5.8575;5.6586;5.6484;5.5821;5.4391;5.3728 -;-;-;-;-;-;-;-;-;+ + 4744 1 2.259 102647.0 1.0 2039 4058 6093 SUDHL4_400M_050219_1,6099 SUDHL4_400M_050219_1,6099,RMKQVEELY True True RMKQVEELY 31.743711 598.310595691204 1193981.625 6093.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1 6.230698426564534 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6100 31.758 800.0 150310.0 25 0 13387.0 + 17101 KLFEKSTGL 9 148 511.7979981531713 1021.5814433731426 2 511.7983276247978 MULTI CID FTMS 0 0 0 6093 176040.953125 1.0 0 0.0 7 Unmodified _KLFEKSTGL_ ENSG00000142856|ENST00000271002|ITGB3BP;ENST00000460394.5_1_1:63917661-63988804:-|nuORF;ENST00000461681.5_1_1:63906715-63922830:-|nuORF;ENST00000462285.5_1_1:63919583-63920635:-|nuORF;nc|ENSG00000142856|Q13352-2|ITGB3BP;nc|ENSG00000142856|Q13352-5|ITGB3BP 19.361941925380144 0.3125782356748823 5 K{I|L}{M(Oxidation (M))|F}E 4 5 36.344 0.0 0.0 3.5577 0.0 0.0 0.0 501.26923547916255 501.26923547916255 23.58013107151504 0.0 0.0 0.0 0 1.1307196863200843 0.0 0.0 0.0 + K{I|L}{M(Oxidation (M))|F}E 3.5577 + + 543 + 1 2.259 94758.0 0.9399999976158142 2040 4058 6093 SUDHL4_400M_050219_1,6100 SUDHL4_400M_050219_1,6100,KLFEKSTGL False True KLFEKSTGL 31.757542 511.798327624798 2606103.25 6093.0 ENST00000462285.5_1_1:63919583-63920635:-|nuORF;;nc|ENSG00000142856|Q13352-2|ITGB3BP;;ENST00000460394.5_1_1:63917661-63988804:-|nuORF;;nc|ENSG00000142856|Q13352-5|ITGB3BP;;ENST00000461681.5_1_1:63906715-63922830:-|nuORF;;ENSG00000142856|ENST00000271002|ITGB3BP 2.027233997980753 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6101 31.771 800.0 137900.0 25 0 7372.5 + 31335 RMNPNSPSITY 11 109 640.3080417445527 1278.6015305559054 2 640.3082153201103 MULTI CID FTMS 0 0 0 6093 149184.5625 1.0 0 0.0 8 Unmodified _RMNPNSPSITY_ ENSG00000100632|ENST00000557016|ERH;ENST00000216520.6_1_14:69847257-69864987:-|nuORF 65.47368725323818 0.0469305343733202 5 [{I|L}T]SP[WD]R{I|L}EY 10 8 + 55.773 0.0 0.0 4.362 4.362 76.417 0.0 0.0 0.0 11.431759481772096 25.807739662107178 11.431759481772096 0.8541549992214428 0 0.3807196863200844 1.0969100130080565 1.066901560044258 0.3494850021680094 [{I|L}T]SP[WD]R{I|L}EY;[{I|L}T]SP[WD][PS]{I|L}TY;{[WT]|[RM]}N[NP]SR{I|L}EY;{[WT]|[RM]}N[NP]S[PS]{I|L}TY;[{I|L}T]SP[WD][VG]{I|L}EY;[{I|L}T]SP{[WS]|[C(Carbamidomethyl (C)){I|L}]}[DP]{I|L}TY;{[TV]|[{I|L}S]}SN[NP]SR{I|L}EY;[{I|L}T]C[WH]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}TY;{[TV]|[{I|L}S]}SN[NP]S[PS]{I|L}TY;[PS][{I|L}T][WD]R{I|L}EY 4.362;4.2952;3.4638;3.397;3.3719;3.2119;3.1069;3.0442;3.0429;3.0203 -;-;-;+;-;-;-;-;-;- + 717 1 2.259 86284.8 0.949999988079071 2041 4058 6093 SUDHL4_400M_050219_1,6101 SUDHL4_400M_050219_1,6101,RMNPNSPSITY True True RMNPNSPSITY 31.771381 640.30821532011 1030798.4375 6093.0 ENSG00000100632|ENST00000557016|ERH;;ENST00000216520.6_1_14:69847257-69864987:-|nuORF 7.703552881876628 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6102 31.785 800.0 116640.0 25 0 12005.0 + -1 GCWSGDHPPDT 11 110 635.7415307049818 1269.4685084767634 2 635.7405273318291 MULTI CID FTMS 0 0 0 6093 144328.40625 0.2973829003587969 2 -0.1963558197021484 9 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))GC(Carbamidomethyl (C))WSGDHPPDT_ REV__ENST00000424435.1_1_1:154376216-154376312:-|nuORF 2.9952420565917617 0.861016188266951 5 DP[TP] 4 -1 18.614 0.0 0.0 1.4663 0.0 0.0 841.274490998051 0.0 841.274490998051 0.0 6.140078085766092 0.0 0.0 0 0.0 0.0 0.6307196863200843 0.0 DP[TP] 1.4663 - 436 + 1 2.259 72555.8 0.9399999976158142 2042 4058 6093 SUDHL4_400M_050219_1,6102 SUDHL4_400M_050219_1,6102,GCWSGDHPPDT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6103 31.8 775.0 158640.0 25 0 6882.3 + 17891 KQPAIMPGQSY 11 130 610.3107140659321 1218.606875198664 2 610.3104736208916 MULTI CID FTMS 0 0 0 6093 186088.984375 1.0 0 0.0 10 Unmodified _KQPAIMPGQSY_ ENSG00000104824|ENST00000221419|HNRNPL;ENST00000568980.1_1_15:34781237-34781759:-|nuORF;ENST00000595164.5_1_19:39327364-39331218:-|nuORF;ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;nc|ENSG00000104824|P14866-2|HNRNPL 72.58957779350692 0.0248999445157541 5 [PA]{I|L}QKM[PG]QSY 11 4 + 49.351 0.0 0.0 4.0498 4.0498 80.236 0.0 0.0 0.0 4.842162701078166 11.302663821573477 4.842162701078166 4.842162701078166 0 1.742992819099939 0.5376020021010439 0.0 1.1307196863200843 [PA]{I|L}QKM[PG]QSY;[AG]K[PA]{I|L}M[PG]QSY;[PA]{I|L}MQK[PG]QSY;[PA]{I|L}QKM[PG][AG]SY;[PA]{I|L}[AG]KM[PG]QSY;[PA]A{[VA]|[{I|L}G]}KM[PG]QSY;[PA][KQ]{I|L}M[PG]QSY;[PA]A[KG]{I|L}M[PG]QSY;[KQ][PA]{I|L}M[PG]QSY;[PA]{I|L}QMK[PG]QSY 4.0498;3.6524;3.4538;3.3007;3.3007;3.1186;3.0471;3.0161;2.9278;2.8152 -;-;-;-;-;-;-;-;+;- + 1277 1 2.259 94961.8 1.0 2043 4058 6093 SUDHL4_400M_050219_1,6103 SUDHL4_400M_050219_1,6103,KQPAIMPGQSY True True KQPAIMPGQSY 31.800085 610.310473620892 1464810.625 6093.0 ENST00000595443.5_1_19:39327988-39329682:-|nuORF;;ENST00000597731.1_1_19:39327364-39331218:-|nuORF;;nc|ENSG00000104824|P14866-2|HNRNPL;;ENSG00000104824|ENST00000221419|HNRNPL;;ENST00000568980.1_1_15:34781237-34781759:-|nuORF;;ENST00000595164.5_1_19:39327364-39331218:-|nuORF 7.246764818827311 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6104 31.804 177.0 384740.0 25 0 73537.0 + 38432 TRRAGVLG 8 82 415.2545380661255 0 415.2547180056572 PEAK CID FTMS 0 0 0 6093 156431.265625 0.7064638087283794 -3 0.2158088684082031 11 Unmodified _TRRAGVLG_ REV__ENSG00000160460|ENST00000598249|SPTBN4;REV__nc|ENSG00000160460|Q9H254-2|SPTBN4;REV__nc|ENSG00000160460|Q9H254-4|SPTBN4 0.7936320650641473 0.5979579398327216 5 P 1 -1 0.9691 0.0 0.0 0.11697 0.0 0.0 432.2955618726822 296.1139010065063 728.4094628791885 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.11697 - 1 + 1 2.259 56422.3 1.0 2044 4058 6093 SUDHL4_400M_050219_1,6104 SUDHL4_400M_050219_1,6104,TRRAGVLG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6105 31.817 800.0 262070.0 25 0 10875.0 13172 HFVNHLRY 8 239 362.5253497884838 0 362.5253478884697 PEAK CID FTMS 0 0 0 6093 105395.9375 1.0 0 0.0 12 Unmodified _HFVNHLRY_ ENSG00000133328|ENST00000255695|PLAAT2 8.593279151180031 0.5573742999696857 5 E 1 8 10.242 0.0 0.0 1.4166 0.0 0.0 60.73216929877192 530.2383516900999 590.9705209888718 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 E 1.4166 - 54 + 1 2.259 164713.8 0.5799999833106995 2045 4058 6093 SUDHL4_400M_050219_1,6105 SUDHL4_400M_050219_1,6105,HFVNHLRY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6106 31.832 800.0 56275.0 25 0 4143.9 -1 0 77 625.3516837767245 624.3444073101244 1 625.8047363162041 MULTI CID FTMS 0 0 0 -1 0 13 5 H 1 -1 11.783 0.0 0.0 1.8872 0.0 0.0 469.27415386949787 0.0 469.27415386949787 0.0 1.8612115602016548 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.8872 - 11 + 1 2.259 41611.2 0.8399999737739563 2046 4058 6093 SUDHL4_400M_050219_1,6106 SUDHL4_400M_050219_1,6106, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6107 31.846 800.0 167830.0 25 0 33375.0 -1 0 116 674.3342391793224 673.3269627127223 1 674.3333007693291 MULTI CID FTMS 0 0 0 6093 78812.25 0.5176633685192964 -1 0.1038646697998046 14 5 {NN|[MP]|[D{I|L}]|[EV]}E{I|L}NA 6 -1 + 45.04 0.0 0.0 6.6892 6.6892 82.057 0.0 0.0 0.0 0.0877392430750489 6.601292355026942 0.0877392430750489 0.0877392430750489 0 0.805462187404089 0.8538719643217619 0.3252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}E{I|L}NA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}NA;EEV{I|L}GQ;{NN|[MP]|[D{I|L}]|[EV]}EN{I|L}A;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}N{I|L}A;{[QN]|[E{I|L}]|[KN]}D{I|L}NA;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}GGA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{I|L}GGA;{NN|[MP]|[D{I|L}]|[EV]}EARA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}ARA 6.6892;6.6762;5.7088;5.5393;5.5263;5.389;5.2902;5.2771;4.7825;4.7695 -;-;-;-;-;-;-;-;-;- 577 1 2.259 103500.9 0.6200000047683716 2047 4058 6093 SUDHL4_400M_050219_1,6107 SUDHL4_400M_050219_1,6107, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6109 31.851 20.0 1069100.0 25 0 159710.0 + 16123 ITSSAVTTALK 11 41 546.3189286769515 1090.6233044207029 2 546.3190795779228 MULTI CID FTMS 0 0 0 6108 1317591.25 0.0945169103611336 2 -0.1233730316162109 1 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 21.799462835604743 0.5803446114589816 5 {I|L}TSSAVT 7 4 71.714 0.0 0.0 6.5755 0.0 0.0 0.0 428.25214563541255 428.25214563541255 62.50920329498588 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}TSSAVT 6.5755 + + 33 + 1 2.252 21688.2 1.0 2048 4059 6108 SUDHL4_400M_050219_1,6109 SUDHL4_400M_050219_1,6109,ITSSAVTTALK False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_1 6110 31.852 54.0 769880.0 25 0 69881.0 15652 IQLGSAAFF 9 85 477.2564805366951 952.4984081401902 2 477.2561218142509 MULTI CID FTMS 0 0 0 6108 572384.25 0.2349809857834439 1 -0.0536842346191406 2 Unmodified _IQLGSAAFF_ ENSG00000183303|ENST00000329434|OR5P2 42.09456458481378 0.0639583784996157 5 [Q{I|L}]{I|L}G 4 5 42.703 0.0 0.0 4.4833 0.0 0.0 0.0 538.2273043268186 538.2273043268186 30.49681237692305 0.0 0.0 0.0 0 0.6505149978319906 2.0 0.0 0.0 + [Q{I|L}]{I|L}G 4.4833 + + 61 + 1 2.252 37475.0 1.0 2049 4059 6108 SUDHL4_400M_050219_1,6110 SUDHL4_400M_050219_1,6110,IQLGSAAFF True False QLLGSAHEV 31.852122 477.256121814251 11623010.0 6108.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 3.8019593556722007 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6111 31.853 52.0 1306900.0 25 0 282790.0 + 9469 FLDEKTHEL 9 104 377.860480316295 1130.559611549085 3 377.8605834841728 MULTI CID FTMS 0 0 0 6108 877916.25 1.0 0 0.0 3 Unmodified _FLDEKTHEL_ ENSG00000129317|ENST00000344862|PUS7L 43.77239144664712 0.0547478964384323 5 [HT]EK{M(Oxidation (M))|F}{I|L}D{I|L}E 9 7 + 61.378 0.0 0.0 5.429 5.429 82.691 0.0 0.0 0.0 3.182016416415827 6.437998287963005 3.182016416415827 3.182016416415827 0 0.3054621874040891 0.721246399047171 1.9049471895720984 0.0 [HT]EK{M(Oxidation (M))|F}{I|L}D{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}[RN]KED{I|L}E;{[QN]|[E{I|L}]|[KN]}QQKED{I|L}E;{[QD]|[EN]|[WG]|[KD]|[RS]}[PG]TKED{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}[RN][SG]{I|L}D{I|L}E;{[QN]|[E{I|L}]|[KN]}A{[QG]|[NA]}KED{I|L}E;{M(Oxidation (M))|F}{I|L}DEK[VS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[HT]EKE[{M(Oxidation (M))|F}V]{I|L}E;[HT]E{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}[PS]{[ET]|[MV]}{I|L}D{I|L}E 5.429;5.1475;4.2365;4.148;4.1097;4.0668;4.0403;3.7074;3.6882;3.2894 -;-;-;-;-;-;-;-;-;- 684 1 2.252 60126.4 1.0 2050 4059 6108 SUDHL4_400M_050219_1,6111 SUDHL4_400M_050219_1,6111,FLDEKTHEL True True FLDEKTHEL 31.853472 377.860583484173 8899069.5 6108.0 ENSG00000129317|ENST00000344862|PUS7L 5.466456254323323 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6112 31.855 61.0 915520.0 25 0 117070.0 + 9470 FLDEKTHEL 9 83 566.2869159367567 1130.559278940313 2 566.2866699099541 MULTI CID FTMS 0 0 0 6108 739979.6875 1.0 0 0.0 4 Unmodified _FLDEKTHEL_ ENSG00000129317|ENST00000344862|PUS7L 34.93206674587334 0.1032771302489716 5 TKED{I|L}E 6 7 49.474 0.0 0.0 4.3761 0.0 0.0 397.1968556134781 0.0 397.1968556134781 0.0 27.74781177446848 0.0 0.0 0 0.805462187404089 0.0 0.805462187404089 0.0 TKED{I|L}E 4.3761 - 188 1 2.252 47913.6 1.0 2051 4059 6108 SUDHL4_400M_050219_1,6112 SUDHL4_400M_050219_1,6112,FLDEKTHEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6113 31.866 648.0 299210.0 25 0 72377.0 -1 0 64 1174.7981290967668 3521.3725578905005 3 1175.131884753704 MULTI CID FTMS 0 0 0 6108 578196.75 0.3826485890333039 1 -0.0536842346191406 5 5 G{[YC]|[HE]}TYN{I|L}T 8 -1 23.383 0.0 0.0 0.66403 0.0 0.0 2147.7580928954185 455.1890047662719 2602.9470976616903 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5994850021680094 0.8494850021680094 G{[YC]|[HE]}TYN{I|L}T 0.66403 - 520 + 1 2.252 160015.0 1.0 2052 4059 6108 SUDHL4_400M_050219_1,6113 SUDHL4_400M_050219_1,6113, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6114 31.869 133.0 758070.0 25 0 170770.0 + -1 KEAACSSGVLLEVK 14 95 358.7133964051758 715.4122398771516 2 358.7129699587822 MULTI CID FTMS 0 0 0 6108 552569.8125 1.0 0 0.0 6 nc|ENSG00000134363|P19883-2|FST;ENSG00000134363|ENST00000256759|FST 5 {NN|[MP]|[D{I|L}]|[EV]}{I|L}EVK 6 -1 + 59.378 0.0 0.0 8.2999 8.2999 91.517 0.0 0.0 0.0 26.478174818886373 6.307051727774919 6.307051727774919 6.307051727774919 0 0.3494850021680094 2.0 0.8494850021680094 0.2396518287104437 {NN|[MP]|[D{I|L}]|[EV]}{I|L}EVK;{NN|[MP]|[D{I|L}]|[EV]}{I|L}EKV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}V{[QN]|[E{I|L}]|[KN]}K;{[TV]|[{I|L}S]}GV{I|L}EV;{[TV]|[{I|L}S]}G{I|L}VEV;{[QN]|[E{I|L}]|[KN]}KVEV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}EV;{[TV]|[{I|L}S]}[R{I|L}]EV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VEV 8.2999;7.4183;4.9468;4.6789;2.9551;1.9781;1.6909;1.6447;0.9414;0.6677 -;-;-;-;-;-;-;-;-;- 143 + 1 2.252 84730.6 1.0 2053 4059 6108 SUDHL4_400M_050219_1,6114 SUDHL4_400M_050219_1,6114, False False KEAACSSGVLLEVK 31.869008 358.712969958782 794115.625 6108.0 nc|ENSG00000134363|P19883-2|FST;;ENSG00000134363|ENST00000256759|FST 0.4871387351304292 4.0 False 14.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6115 31.872 135.0 468410.0 25 0 81136.0 + 1784 ALSDSIHTV 9 83 471.7485233506911 941.4824937681822 2 471.7479736208916 MULTI CID FTMS 0 0 0 6108 330409.6875 1.0 0 0.0 7 Unmodified _ALSDSIHTV_ ENSG00000110851|ENST00000228437|PRDM4 50.855029805455786 0.0384952370514206 5 [{I|L}A]{[WT]|[RM]}DH{[TV]|[{I|L}S]} 8 4 + 44.684 0.0 0.0 4.7462 4.7462 86.981 0.0 0.0 0.0 8.710602190630254 9.291746928241125 8.710602190630254 9.262137858390808 0 0.9247425010840048 2.0 1.4802046884880935 0.0 [{I|L}A]{[WT]|[RM]}DH{[TV]|[{I|L}S]};[{I|L}A]SD{[TV]|[{I|L}S]}H{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}HDSTV[{I|L}A];[HT]VDSTV[{I|L}A];[{I|L}A]{[WT]|[RM]}[HM][{I|L}A];[{I|L}A][{M(Oxidation (M))|F}V]{[CA]|SS}[YR];[{I|L}A][YG]{[TV]|[{I|L}S]}[YR];[{I|L}A]{[WT]|[RM]}{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[TV]|[{I|L}S]}H{[CA]|SS}EV[{I|L}A];[{I|L}A][YG][YR]{[TV]|[{I|L}S]} 4.7462;3.7624;3.7097;3.1983;3.0953;2.3814;2.3814;2.3473;2.0378;1.9634 -;+;-;-;-;-;-;-;-;- + 236 + 1 2.252 53214.5 1.0 2054 4059 6108 SUDHL4_400M_050219_1,6115 SUDHL4_400M_050219_1,6115,ALSDSIHTV True True ALSDSIHTV 31.871747 471.747973620892 1573667.625 6108.0 ENSG00000110851|ENST00000228437|PRDM4 5.9220817883809405 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6116 31.874 116.0 536210.0 25 0 33259.0 + -1 AIQEQITRV 9 75 528.3072783433159 527.3000018767159 1 529.3051635622978 MULTI CID FTMS 0 0 0 6108 296999.53125 1.0 0 0.0 8 ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1 5 [{I|L}A]GA 4 -1 26.655 0.0 0.0 5.0551 0.0 0.0 0.0 212.0970959531409 212.0970959531409 17.359856381998778 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]GA 5.0551 - 26 1 2.252 54167.0 1.0 2055 4059 6108 SUDHL4_400M_050219_1,6116 SUDHL4_400M_050219_1,6116, False False AIQEQITRV 31.874172 529.305163562298 478497.6875 6108.0 ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 3.747642199198405 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6117 31.877 112.0 518270.0 25 0 78122.0 + 17408 KMPEINAKV 9 96 515.2923031026941 1028.570053272188 2 515.2910644412041 MULTI CID FTMS 0 0 0 6108 251398.453125 0.5254284562720567 -2 0.2465362548828125 9 Unmodified _KMPEINAKV_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;ENST00000569569.5_1_16:56966069-56970730:+|nuORF;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1 15.738622578938676 0.4106572216562794 5 GM{[HG]|PP}AKM{[QV]|[N{I|L}]|[RA]|[KV]} 9 5 21.576 0.0 0.0 2.0976 0.0 0.0 71.07435042548984 0.0 71.07435042548984 0.0 11.961499616092654 0.0 0.0 0 0.75 0.0 0.0 0.0 GM{[HG]|PP}AKM{[QV]|[N{I|L}]|[RA]|[KV]} 2.0976 - 320 1 2.252 51524.0 1.0 2056 4059 6108 SUDHL4_400M_050219_1,6117 SUDHL4_400M_050219_1,6117,KMPEINAKV False True KMPEINAKV 31.876535 515.291064441204 3434998.5 6108.0 nc|ENSG00000051108|Q15011-2|HERPUD1;;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;;nc|ENSG00000051108|Q15011-3|HERPUD1;;ENSG00000051108|ENST00000439977|HERPUD1;;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;;ENST00000569569.5_1_16:56966069-56970730:+|nuORF 0.8915812174479166 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6118 31.88 190.0 333000.0 25 0 29754.0 + 39471 VAQEPVNTL 9 105 485.7643916556903 969.5142303781806 2 485.7639953494072 MULTI CID FTMS 0 0 0 6108 193597.765625 1.0 0 0.0 10 Unmodified _VAQEPVNTL_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 32.30548876998284 0.1201446275138228 5 [{I|L}T]NR 4 8 37.624 0.0 0.0 3.8807 0.0 0.0 0.0 482.2228234780432 482.2228234780432 21.975964267001643 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.2887254899964357 [{I|L}T]NR 3.8807 - 399 1 2.252 56194.6 1.0 2057 4059 6108 SUDHL4_400M_050219_1,6118 SUDHL4_400M_050219_1,6118,VAQEPVNTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6119 31.885 238.0 372320.0 25 0 28789.0 + 31577 RQPDSPTALY 10 92 574.2903252672164 1146.5660976012327 2 574.2877685427666 MULTI CID FTMS 0 0 0 6108 169433.84375 0.2239948623013304 -3 0.3078842163085937 11 Unmodified _RQPDSPTALY_ ENSG00000132382|ENST00000254718|MYBBP1A;ENST00000574547.5_1_17:4442712-4447986:-|nuORF;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 28.49450938151212 0.328477364964909 5 S[TP]A{I|L}Y 6 4 39.882 0.0 0.0 3.4784 0.0 0.0 496.23902205090974 0.0 496.23902205090974 0.0 27.910298401682 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.0 + S[TP]A{I|L}Y 3.4784 + + 179 1 2.252 70349.0 1.0 2058 4059 6108 SUDHL4_400M_050219_1,6119 SUDHL4_400M_050219_1,6119,RQPDSPTALY False True RQPDSPTALY 31.884657 574.287768542767 8964140.0 6108.0 ENST00000574547.5_1_17:4442712-4447986:-|nuORF;;ENSG00000132382|ENST00000254718|MYBBP1A;;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 7.854966163635254 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6120 31.891 334.0 242520.0 25 0 30264.0 + 3132 AVPPALRGP 9 99 439.2665232806816 876.5184936281631 2 439.2668945193291 MULTI CID FTMS 0 0 0 6108 131312.078125 0.0199589212541743 109 -3.193561553955078 12 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 5 {[VA]|[{I|L}G]}PPA 5 -1 37.928 0.0 0.0 4.3272 0.0 0.0 0.0 438.2469402362513 438.2469402362513 27.928479137076565 0.0 0.0 0.0 0 0.2215141619232908 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.3272 + + 58 + 1 2.252 64120.3 1.0 2059 4059 6108 SUDHL4_400M_050219_1,6120 SUDHL4_400M_050219_1,6120,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6121 31.895 210.0 311540.0 25 0 27428.0 + 20170 LKRLKTGRSH 10 90 399.2506069320606 0 399.2520934939384 PEAK CID FTMS 0 0 0 6108 119469.9375 0.9795434893577551 -1 0.1426715850830078 13 Unmodified _LKRLKTGRSH_ REV__ENSG00000143393|ENST00000368873|PI4KB;REV__nc|ENSG00000143393|Q9UBF8-2|PI4KB 1.7422754331352035 0.3961065659209837 5 V 1 -1 2.2185 0.0 0.0 0.27853 0.0 0.0 612.3280743604118 82.06695734195546 694.3950317023673 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.27853 - 1 + 1 2.252 55144.5 1.0 2060 4059 6108 SUDHL4_400M_050219_1,6121 SUDHL4_400M_050219_1,6121,LKRLKTGRSH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6122 31.9 268.0 220240.0 25 0 20319.0 + 9736 FMDDTSRSI 9 102 536.2429375831489 1070.4713222330977 2 536.2419311404228 MULTI CID FTMS 0 0 0 6108 91923.6796875 1.0 0 0.0 14 Unmodified _FMDDTSRSI_ ENSG00000233927|ENST00000600659|RPS28;ENST00000442562.1_1_17:18476116-18476272:+|nuORF 12.240655878213236 0.5053430591993562 5 DDME 4 7 34.68 0.0 0.0 3.2397 0.0 0.0 562.30571181465 0.0 562.30571181465 0.0 21.581531501239297 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DDME 3.2397 - 36 1 2.252 50173.7 1.0 2061 4059 6108 SUDHL4_400M_050219_1,6122 SUDHL4_400M_050219_1,6122,FMDDTSRSI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6124 31.916 800.0 89915.0 25 0 9878.2 + -1 NQRRQEDMEEA 11 118 711.3075970249783 1420.6006411167566 2 711.8008911013603 MULTI CID FTMS 0 0 0 6123 83812.8984375 0.0041619970636862 30 -1.0832138061523438 1 Oxidation (M) _NQRRQEDM(Oxidation (M))EEA_ REV__ENSG00000183856|ENST00000361170|IQGAP3 5.296884461304476 0.8501568894076437 5 ANEQA[HD]{M(Oxidation (M))|F}Y 9 -1 54.843 0.0 0.0 3.8606 0.0 0.0 327.15374891560174 0.0 327.15374891560174 0.0 44.84305011473481 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.8494850021680094 ANEQA[HD]{M(Oxidation (M))|F}Y 3.8606 - 1041 + 1 2.252 56642.9 0.6899999976158142 2062 4060 6123 SUDHL4_400M_050219_1,6124 SUDHL4_400M_050219_1,6124,NQRRQEDMEEA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6125 31.92 215.0 300430.0 25 0 43655.0 + 31192 RLQDAIAKV 9 77 507.3085170836043 1012.6024812340086 2 507.3080932497978 MULTI CID FTMS 0 0 0 6123 215206.921875 0.7944447757857181 -2 0.1963558197021484 2 Unmodified _RLQDAIAKV_ ENSG00000100014|ENST00000314328|SPECC1L;nc|ENSG00000100014|Q69YQ0-2|SPECC1L 19.361941925380144 0.3125782356748823 5 A{I|L}AD 4 6 28.175 0.0 0.0 2.7825 0.0 0.0 245.17268509748925 394.2211397760376 639.3938248735268 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 A{I|L}AD 2.7825 - 86 + 1 2.252 53663.4 1.0 2063 4060 6123 SUDHL4_400M_050219_1,6125 SUDHL4_400M_050219_1,6125,RLQDAIAKV False True RLQDAIAKV 31.920078 507.308093249798 1210112.75 6123.0 nc|ENSG00000100014|Q69YQ0-2|SPECC1L;;ENSG00000100014|ENST00000314328|SPECC1L 4.810375054677327 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6126 31.934 800.0 161810.0 25 0 12271.0 + 25531 NEQRQRELEEF 11 131 739.3555251874893 1476.6964974417783 2 739.3563720583916 MULTI CID FTMS 0 0 0 6123 207782.84375 0.675887254047389 -1 0.0536842346191406 3 Unmodified _NEQRQRELEEF_ REV__ENSG00000162614|ENST00000334785|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-2|NEXN;REV__nc|ENSG00000162614|Q0ZGT2-4|NEXN 18.373094154950223 0.6529654022026722 5 {[QV]|[N{I|L}]|[RA]|[KV]}NWQRDG{M(Oxidation (M))|F}{I|L}QS 12 -1 + 87.229 0.0 0.0 5.907 5.907 85.806 0.0 0.0 0.0 4.920503888755178 4.920503888755178 4.920503888755178 4.920503888755178 0 2.631203311264384 2.0 0.0 1.5387254899964358 {[QV]|[N{I|L}]|[RA]|[KV]}NWQRDG{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NWQ[VG]DG{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}GGWQRDG{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}N{I|L}{[{M(Oxidation (M))|F}D]|MM}QDGN{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAYY{[MG]|[TS]}G{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAYY[MN]{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NADQT{[YC]|[HE]}{I|L}[HV]S;{[QV]|[N{I|L}]|[RA]|[KV]}NWQ[{M(Oxidation (M))|F}T]{I|L}N{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NA[{M(Oxidation (M))|F}E]{[QS]|[NT]}{I|L}N{I|L}QS 5.907;5.5738;5.2909;5.2909;5.2293;5.1052;4.8593;4.6817;4.6456;4.6212 -;-;-;-;-;-;-;-;-;- 1860 1 2.252 93817.3 0.8100000023841858 2064 4060 6123 SUDHL4_400M_050219_1,6126 SUDHL4_400M_050219_1,6126,NEQRQRELEEF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6127 31.948 800.0 142490.0 25 0 13098.0 + 17375 KMDPVAYRV 9 144 539.7887350554722 1077.5629171777443 2 539.7892944216728 MULTI CID FTMS 0 0 0 6123 173467.875 0.812859915824424 1 -0.0696887969970703 4 Unmodified _KMDPVAYRV_ ENSG00000172053|ENST00000306125|QARS1;ENST00000478561.5_1_3:49137386-49138086:-|nuORF;nc|ENSG00000172053|P47897-2|QARS1 32.78568957990786 0.1150597335874693 5 KMDVP 5 5 51.476 0.0 0.0 4.777 0.0 0.0 0.0 504.2581881158813 504.2581881158813 23.772255150623963 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 KMDVP 4.777 - 429 + 1 2.252 91010.9 0.6899999976158142 2065 4060 6123 SUDHL4_400M_050219_1,6127 SUDHL4_400M_050219_1,6127,KMDPVAYRV True True KMDPVAYRV 31.947764 539.789294421673 1487586.875 6123.0 nc|ENSG00000172053|P47897-2|QARS1;;ENSG00000172053|ENST00000306125|QARS1;;ENST00000478561.5_1_3:49137386-49138086:-|nuORF 5.346515576044719 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6128 31.951 163.0 340390.0 25 0 43000.0 + 8953 FANDANKVL 9 94 496.26252976796593 0 496.2611266970634 PEAK CID FTMS 0 0 0 6123 178806.203125 0.3144974755769434 -3 0.3002204895019531 5 Unmodified _FANDANKVL_ ENSG00000123104|ENST00000381340|ITPR2 22.736283301280096 0.1762661025464585 5 {M(Oxidation (M))|F}AVKN 5 6 17.167 0.0 0.0 1.7331 0.0 0.0 131.09017076464437 297.0846346490844 428.1748054137288 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}AVKN 1.7331 - 86 + 1 2.252 47359.1 1.0 2066 4060 6123 SUDHL4_400M_050219_1,6128 SUDHL4_400M_050219_1,6128,FANDANKVL False True FANDANKVL 31.950961 496.261126697063 2605726.0 6123.0 ENSG00000123104|ENST00000381340|ITPR2 1.4362411499023438 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6129 31.955 242.0 412120.0 25 0 96813.0 + 1805 ALSTPPFSR 9 116 488.2671303077398 0 488.2681152224541 PEAK CID FTMS 0 0 0 6123 140348.5 0.8096933473620143 7 -0.2709770202636719 6 Unmodified _ALSTPPFSR_ REV__ENST00000345990.8_2_5:122847977-122881201:+|nuORF 15.847184025352805 0.2451986057151378 5 {I|L}E 2 -1 12.959 0.0 0.0 1.3298 0.0 0.0 487.2224479005826 242.1516512506469 729.3740991512295 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}E 1.3298 - 149 + 1 2.252 82768.2 1.0 2067 4060 6123 SUDHL4_400M_050219_1,6129 SUDHL4_400M_050219_1,6129,ALSTPPFSR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6130 31.969 800.0 120030.0 25 0 6778.0 -1 CKNRRCGPLNV 11 150 687.3495297838189 1372.6845066344376 2 687.3508788943291 MULTI CID FTMS 0 0 0 6123 102790.015625 1.0 0 0.0 7 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))KNRRC(Carbamidomethyl (C))GPLNV_ ENSG00000122863|ENST00000373115|CHST3 12.240655878213236 0.7805268987462184 5 {[TV]|[{I|L}S]}[Q{I|L}][WD]QSANV{I|L} 12 -1 + 62.999 0.0 0.0 4.5894 4.5894 83.149 0.0 0.0 0.0 6.636245899991415 16.61181443446619 6.636245899991415 6.636245899991415 0 0.6861818737241735 1.6989700043360187 0.0 0.805462187404089 {[TV]|[{I|L}S]}[Q{I|L}][WD]QSANV{I|L};[QT]E{[TV]|[{I|L}S]}[PS]QSANV{I|L};{[{M(Oxidation (M))|F}D]|MM}AYA[R{M(Oxidation (M))|F}]SANV{I|L};[QT][{I|L}T]D[PS]QSANV{I|L};{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))R]PSANV{I|L};[QT]E{[TV]|[{I|L}S]}{[QS]|[NT]}PSANV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{[TV]|[{I|L}S]}[PS]QSANV{I|L};{[SA]|[TG]}AE{[TV]|[{I|L}S]}[PS]QSANV{I|L};[QT][{I|L}T]D{[QS]|[NT]}PSANV{I|L};[QT]E{[NV]|[RG]}D[{I|L}A]SANV{I|L} 4.5894;4.106;3.9493;3.9444;3.9315;3.7584;3.6725;3.6285;3.5968;3.5558 -;-;-;-;-;-;-;-;-;- 5373 1 2.252 72008.0 0.6000000238418579 2068 4060 6123 SUDHL4_400M_050219_1,6130 SUDHL4_400M_050219_1,6130,CKNRRCGPLNV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6132 31.974 40.0 1432000.0 25 0 131750.0 -1 FTNFLYDMLFY 11 59 745.3390765818416 1488.663600230483 2 745.3394042849541 MULTI CID FTMS 0 0 0 6131 1064747.375 0.9122495778773684 1 -0.0357799530029296 1 Oxidation (M) _FTNFLYDM(Oxidation (M))LFY_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 5.731851221503515 0.8481046878870278 5 HDEAQQNA{M(Oxidation (M))|F}Y 10 -1 66.803 0.0 0.0 4.4875 0.0 0.0 267.1584645001969 0.0 267.1584645001969 0.0 49.8134410448845 0.0 0.0 0 0.8935078169319297 0.0 0.0 1.274227503252014 HDEAQQNA{M(Oxidation (M))|F}Y 4.4875 - 311 1 2.252 49421.1 1.0 2069 4061 6131 SUDHL4_400M_050219_1,6132 SUDHL4_400M_050219_1,6132,FTNFLYDMLFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6133 31.98 335.0 194530.0 25 0 36278.0 + 41176 VPDISKLSY 9 82 511.2804802620444 1020.5464075908887 2 511.2804748415947 MULTI CID FTMS 0 0 0 6131 109851.5703125 1.0 0 0.0 2 Unmodified _VPDISKLSY_ REV__ENSG00000112237|ENST00000520429|CCNC;REV__ENST00000523639.5_1_6:99998829-100016472:-|nuORF 8.593279151180031 0.6146971463335029 5 Y 1 -1 13.495 0.0 0.0 1.3223 0.0 0.0 839.4719427244811 0.0 839.4719427244811 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3223 + + 120 + 1 2.252 57064.6 1.0 2070 4061 6131 SUDHL4_400M_050219_1,6133 SUDHL4_400M_050219_1,6133,VPDISKLSY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6134 31.982 52.0 1323100.0 25 0 95930.0 + 44216 YLGRLAHEV 9 84 529.2929390619128 1056.5713251906254 2 529.2927123904228 MULTI CID FTMS 0 0 0 6131 857845.625 0.8526668463254864 -1 0.0696887969970703 3 Unmodified _YLGRLAHEV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000425147.1_1_21:26734448-26734742:+|nuORF 43.77239144664712 0.0547478964384323 5 [Y{I|L}]VN{I|L}AHEV 9 2 + 64.275 0.0 0.0 6.0834 6.0834 92.186 0.0 0.0 0.0 13.73844550194299 16.293709283484077 13.73844550194299 13.73844550194299 0 1.5400990676322903 2.0 0.0 0.0 [Y{I|L}]VN{I|L}AHEV;V{M(Oxidation (M))|F}HAD{I|L}KEV;V{M(Oxidation (M))|F}HW{I|L}KEV;[{I|L}A]QAAD{I|L}KEV;[{I|L}A][AG]AAD{I|L}KEV;[{I|L}A]QEQ{I|L}KEV;[PS]QAW{I|L}KEV;[{I|L}A]QE[AG]{I|L}KEV;[{I|L}A][AG]EQ{I|L}KEV;[PS][AG]AW{I|L}KEV 6.0834;4.7831;4.4548;4.4064;3.539;2.9383;2.75;2.0668;2.0668;1.8785 -;-;-;-;-;-;-;-;-;- 260 1 2.252 59962.0 1.0 2071 4061 6131 SUDHL4_400M_050219_1,6134 SUDHL4_400M_050219_1,6134,YLGRLAHEV True True YLGRLAHEV 31.981563 529.292712390423 10175954.5 6131.0 ENST00000425147.1_1_21:26734448-26734742:+|nuORF;;ENSG00000142541|ENST00000391857|RPL13A 5.88702917098999 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6135 31.983 73.0 542180.0 25 0 36398.0 + 28991 RLQEEINEV 9 71 565.2962398740214 1128.5779268148426 2 565.2963744997978 MULTI CID FTMS 0 0 0 6131 446333.5625 1.0 0 0.0 4 Unmodified _QDVLWLQEV_ nc|ENSG00000166130|Q70UQ0-2|IKBIP;nc|ENSG00000166130|Q70UQ0|IKBIP 25.399314129420983 0.2080152500878129 5 EE{I|L}NEV 6 6 54.641 0.0 0.0 4.8416 0.0 0.0 397.2436085431656 0.0 397.2436085431656 0.0 41.45365019512085 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.7742275032520141 EE{I|L}NEV 4.8416 - 55 1 2.252 36272.3 1.0 2072 4061 6131 SUDHL4_400M_050219_1,6135 SUDHL4_400M_050219_1,6135,QDVLWLQEV False False RLQEEINEV 31.983275 565.296374499798 2425984.75 6131.0 nc|ENSG00000166130|Q70UQ0-2|IKBIP;;nc|ENSG00000166130|Q70UQ0|IKBIP 5.489136854807536 2.0 False 9.0 True nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 6136 31.986 145.0 515410.0 25 0 33046.0 + 29826 QQIGKVVQV 9 115 499.8035498397391 997.592546746278 2 499.8040038943291 MULTI CID FTMS 0 0 0 6131 285768.25 0.3426635231369666 -3 0.2660446166992187 5 Unmodified _QQLGKVVQV_ ENSG00000161970|ENST00000648839|RPL26;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;ENSG00000037241|ENST00000265100|RPL26L1 32.30548876998284 0.1201446275138228 5 EV 2 8 20.718 0.0 0.0 2.0768 0.0 0.0 751.4693782921637 0.0 751.4693782921637 0.0 2.0910318567799067 0.0 0.0 0 0.2134679910804404 0.0 0.0 0.0 EV 2.0768 - 490 1 2.252 60930.0 1.0 2073 4061 6131 SUDHL4_400M_050219_1,6136 SUDHL4_400M_050219_1,6136,QQLGKVVQV True True QQIGKVVQV 31.986178 499.804003894329 3472800.0 6131.0 ENSG00000161970|ENST00000648839|RPL26;;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;;ENSG00000037241|ENST00000265100|RPL26L1 5.743531068166097 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6137 31.991 275.0 224780.0 25 0 29886.0 + 31927 RVAMYVHAY 9 69 555.2812549584087 1108.5479569836173 2 555.2811767458916 MULTI CID FTMS 0 0 0 6131 115803.2734375 0.973061753249848 -1 0.0696887969970703 6 Unmodified _RVAMYVHAY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000553665.5_1_14:58711638-58724717:+|nuORF;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;ENST00000555931.5_1_14:58714534-58727692:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 21.74664581756881 0.2544899275067181 5 VHAY 4 5 44.24 0.0 0.0 3.9908 0.0 0.0 620.3116077997769 0.0 620.3116077997769 0.0 34.05918628176984 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 + VHAY 3.9908 + + 29 1 2.252 53400.7 1.0 2074 4061 6131 SUDHL4_400M_050219_1,6137 SUDHL4_400M_050219_1,6137,RVAMYVHAY False True RVAMYVHAY 31.991259 555.281176745892 601539.5625 6131.0 ENST00000553665.5_1_14:58711638-58724717:+|nuORF;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3;;ENST00000555931.5_1_14:58714534-58727692:+|nuORF;;ENSG00000100567|ENST00000216455|PSMA3;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF 6.0311001141866045 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6138 32.005 800.0 168290.0 25 0 24416.0 + 45215 YQYLEQSKY 9 133 611.2926566990106 1220.5707604648212 2 611.2909423708916 MULTI CID FTMS 0 0 0 6131 103542.1171875 0.5582373530094857 -4 0.3699092864990234 7 Unmodified _YQYLEQSKY_ ENSG00000137692|ENST00000260247|DCUN1D5;ENST00000529281.5_1_11:102933090-102962462:-|nuORF;ENST00000531571.5_1_11:102933090-102962381:-|nuORF 103.41943736471065 0.0091853052135676 5 YQY{I|L}EQSKY 9 0 + 102.46 0.0 0.0 8.3944 8.3944 94.597 0.0 0.0 0.0 52.32931433837626 12.587418566968154 12.587418566968154 9.208187539523747 0 1.5 0.9208187539523752 2.06295299324845 1.1861818737241734 + + YQY{I|L}EQSKY;YQY{I|L}E[AG]SKY;Y[AG]Y{I|L}EQSKY;YQYR[DV]SKY;YQYRR{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y;YQYRRY{[WS]|[C(Carbamidomethyl (C)){I|L}]};YQYR[WD]KY;Y[AG]Y{I|L}E[AG]SKY;YQYR{[MG]|[TS]}{I|L}QY;YQY[VG][DV]SKY 8.3944;7.64;6.8856;6.4655;6.4614;6.2796;6.1814;6.1348;5.9952;5.7111 +;-;-;-;-;-;-;-;-;- + 2705 + 1 2.252 104413.5 0.6200000047683716 2075 4061 6131 SUDHL4_400M_050219_1,6138 SUDHL4_400M_050219_1,6138,YQYLEQSKY True True YQYLEQSKY 32.005103 611.290942370892 793274.9375 6131.0 ENST00000531571.5_1_11:102933090-102962381:-|nuORF;;ENST00000529281.5_1_11:102933090-102962462:-|nuORF;;ENSG00000137692|ENST00000260247|DCUN1D5 8.111807346343994 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6140 32.012 233.0 250530.0 25 0 23596.0 -1 0 96 543.3012789566384 542.2940024900383 1 543.3019897341728 MULTI CID FTMS 0 0 0 6139 153550.953125 0.0260895045615996 9 -0.4325828552246094 1 5 R 1 -1 10.278 0.0 0.0 1.8952 0.0 0.0 368.1821993667946 0.0 368.1821993667946 0.0 1.2981865525287797 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.8952 - 13 + 1 2.252 50949.3 1.0 2076 4062 6139 SUDHL4_400M_050219_1,6140 SUDHL4_400M_050219_1,6140, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6141 32.026 800.0 136780.0 25 0 11342.0 -1 RWWYWPMS 8 123 614.2758060843212 1226.5370592354425 2 614.2756225466728 MULTI CID FTMS 0 0 0 6139 84571.5859375 0.8544953990555778 1 -0.03466796875 2 Oxidation (M) _RWWYWPM(Oxidation (M))S_ ENST00000584716.1_1_17:30815096-30816294:+|nuORF 13.50788311687929 0.7113601687236069 5 {I|L}PS{M(Oxidation (M))|F} 4 -1 44.993 0.0 0.0 3.6683 0.0 0.0 764.3207334071204 0.0 764.3207334071204 0.0 24.535247228595267 0.0 0.0 0 0.8807196863200843 0.0 0.7742275032520141 0.0 {I|L}PS{M(Oxidation (M))|F} 3.6683 - 357 + 1 2.252 86621.0 0.5899999737739563 2077 4062 6139 SUDHL4_400M_050219_1,6141 SUDHL4_400M_050219_1,6141,RWWYWPMS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6142 32.027 40.0 1960100.0 25 0 324670.0 + 44217 YLGRLAHEV 9 86 353.19756374087643 1056.570861822829 3 353.1974975466728 MULTI CID FTMS 0 0 0 6139 1401514.625 1.0 0 0.0 3 Unmodified _YLGRLAHEV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000425147.1_1_21:26734448-26734742:+|nuORF 24.020572477871973 0.2255576514309169 5 Y{I|L}V{M(Oxidation (M))|F}H 5 6 42.941 0.0 0.0 4.0642 0.0 0.0 0.0 394.2225130670532 394.2225130670532 18.784809756568528 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 Y{I|L}V{M(Oxidation (M))|F}H 4.0642 - 101 + 1 2.252 69823.0 1.0 2078 4062 6139 SUDHL4_400M_050219_1,6142 SUDHL4_400M_050219_1,6142,YLGRLAHEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6143 32.032 255.0 287780.0 25 0 80848.0 18819 LARMKIDP 8 91 472.2729051166529 0 472.2728149294853 PEAK CID FTMS 0 0 0 6139 139953.65625 0.4993682795024511 77 -2.413074493408203 4 Unmodified _LARMKIDP_ ENSG00000089154|ENST00000300648|GCN1 8.593279151180031 0.5573742999696857 5 P 1 7 6.9897 0.0 0.0 0.74159 0.0 0.0 620.8410240010808 221.61477075748283 842.4557947585636 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.74159 + + 11 + 1 2.252 62305.3 1.0 2079 4062 6139 SUDHL4_400M_050219_1,6143 SUDHL4_400M_050219_1,6143,LARMKIDP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6144 32.04 450.0 204940.0 25 0 13720.0 -1 0 135 560.3278436687971 559.320567202197 1 560.3288452029228 MULTI CID FTMS 0 0 0 6139 145983.75 0.0277153059246542 9 -0.4325828552246094 5 5 Y 1 -1 13.099 0.0 0.0 2.3419 0.0 0.0 378.2461175945783 0.0 378.2461175945783 0.0 2.903420005587435 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.3419 - 34 + 1 2.252 76538.2 1.0 2080 4062 6139 SUDHL4_400M_050219_1,6144 SUDHL4_400M_050219_1,6144, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6146 32.052 467.0 209080.0 25 0 42209.0 + -1 SFKDYIQER 9 109 593.2925996419165 592.2853231753164 1 593.2954589724541 MULTI CID FTMS 0 0 0 6145 96111.328125 0.2288103457819106 5 -0.2029266357421875 1 ENSG00000157557|ENST00000360938|ETS2 5 R 1 -1 13.099 0.0 0.0 2.2116 0.0 0.0 418.1736421223852 0.0 418.1736421223852 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 R 2.2116 - 26 + 1 2.269 79261.1 1.0 2081 4063 6145 SUDHL4_400M_050219_1,6146 SUDHL4_400M_050219_1,6146, False False SFKDYIQER 32.051913 593.295458972454 240678.953125 6145.0 ENSG00000157557|ENST00000360938|ETS2 5.893893559773763 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6147 32.057 262.0 221390.0 25 0 17438.0 + 22866 SLAPDGRTF 9 81 482.2490178777353 962.4834828222706 2 482.2471801638603 MULTI CID FTMS 0 0 0 6145 99093.0 0.7940073152640423 -1 0.03466796875 2 Unmodified _LSAPWYLN_ ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000172354|P62879-2|GNB2 16.942295170755138 0.6606234159769251 5 {[TV]|[{I|L}S]}APD 5 4 48.456 0.0 0.0 5.0344 0.0 0.0 0.0 476.2259092203562 476.2259092203562 34.47621246364342 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[TV]|[{I|L}S]}APD 5.0344 - 77 + 1 2.269 51524.0 1.0 2082 4063 6145 SUDHL4_400M_050219_1,6147 SUDHL4_400M_050219_1,6147,LSAPWYLN False False SLAPDGRTF 32.056769 482.24718016386 469649.46875 6145.0 ENSG00000172354|ENST00000303210|GNB2;;nc|ENSG00000172354|P62879-2|GNB2 0.4748089015483856 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6148 32.071 800.0 77770.0 25 0 4458.3 -1 0 80 788.8311131551409 3151.295346754164 4 789.3357421755791 MULTI CID FTMS 0 0 0 6145 97570.140625 0.9791313492632512 -3 0.14013671875 3 5 EC(Carbamidomethyl (C))NSTQ{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 15.544 0.0 0.0 0.49326 0.0 0.0 2170.906077810608 0.0 2170.906077810608 0.0 0.8019813526458179 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 EC(Carbamidomethyl (C))NSTQ{[QD]|[EN]|[WG]|[KD]|[RS]} 0.49326 - 392 + 1 2.269 49464.4 0.5899999737739563 2083 4063 6145 SUDHL4_400M_050219_1,6148 SUDHL4_400M_050219_1,6148, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6151 32.079 115.0 483690.0 25 0 82122.0 + 37436 TLDEYTTRV 9 77 549.2780374953327 1096.5415220574653 2 549.2782470583916 MULTI CID FTMS 0 0 0 6150 315067.75 0.888162537554898 1 -0.0322990417480468 1 Unmodified _TLDEYTTRV_ ENSG00000106459|ENST00000393232|NRF1;nc|ENSG00000106459|Q16656-2|NRF1;nc|ENSG00000106459|Q16656-4|NRF1 29.84058131909904 0.1515068451768857 5 [{I|L}T]DEYT 6 3 62.58 0.0 0.0 5.7071 0.0 0.0 0.0 371.20429407291255 371.20429407291255 51.32118083620117 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.805462187404089 0.0 + [{I|L}T]DEYT 5.7071 + + 47 + 1 2.269 48963.3 1.0 2084 4065 6150 SUDHL4_400M_050219_1,6151 SUDHL4_400M_050219_1,6151,TLDEYTTRV False True TLDEYTTRV 32.079444 549.278247058392 1325657.625 6150.0 nc|ENSG00000106459|Q16656-4|NRF1;;nc|ENSG00000106459|Q16656-2|NRF1;;ENSG00000106459|ENST00000393232|NRF1 4.7588802973429365 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6152 32.082 120.0 379520.0 25 0 32002.0 + 1656 ALNENINQV 9 93 507.7642808704967 1013.5140088077934 2 507.7645751833916 MULTI CID FTMS 0 0 0 6150 296616.65625 0.3741847592767671 -2 0.0347137451171875 2 Unmodified _ALNENINQV_ ENSG00000125779|ENST00000610179|PANK2;nc|ENSG00000125779|Q9BZ23-2|PANK2;nc|ENSG00000125779|Q9BZ23-3|PANK2;nc|ENSG00000125779|Q9BZ23|PANK2 58.6788170122104 0.0268135626297836 5 [{I|L}A]NEN{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 9 2 + 65.41 0.0 0.0 6.4538 6.4538 81.556 0.0 0.0 0.0 0.2102154270018275 7.147642715192504 0.2102154270018275 0.2102154270018275 0 0.3252574989159953 2.0 0.0 0.805462187404089 [{I|L}A]NEN{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}DQA{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[{I|L}A]N[DG]A{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}ENA{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}AEN{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}DQ{I|L}A{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}A[DG]A{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[{I|L}A][DG]NA{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[{I|L}A]GGEN{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[{I|L}A]NEGG{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 6.4538;6.433;6.1632;6.0574;6.0335;5.7604;5.7429;5.5691;5.5452;5.5452 -;-;-;-;-;-;-;-;-;- 745 1 2.269 40635.5 1.0 2085 4065 6150 SUDHL4_400M_050219_1,6152 SUDHL4_400M_050219_1,6152,ALNENINQV True True ALNENINQV 32.081921 507.764575183392 6658416.5 6150.0 ENSG00000125779|ENST00000610179|PANK2;;nc|ENSG00000125779|Q9BZ23-2|PANK2;;nc|ENSG00000125779|Q9BZ23-3|PANK2;;nc|ENSG00000125779|Q9BZ23|PANK2 7.1661787033081055 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6153 32.085 143.0 562050.0 25 0 54306.0 + 32121 RVNIPKVLR 9 88 365.57682232083766 1093.708637562713 3 365.5764953494072 MULTI CID FTMS 0 0 0 6150 262216.71875 0.7908165982106917 -1 0.0038795471191406 3 Unmodified _RVNIPKVLR_ ENSG00000070371|ENST00000427926|CLTCL1;ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC 32.037481411007896 0.1235546156350648 5 [RV]N{I|L}PKV{I|L}R 9 0 [RV]N{I|L} + + 46.94 6.9112 1.433 4.2918 4.2918 57.031 0.0 0.0 0.0 0.0 34.465688720914784 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.9204841662593096 + + [RV]N{I|L}PKV{I|L}R 4.2918 + + 77 + 1 2.269 71010.0 1.0 2086 4065 6150 SUDHL4_400M_050219_1,6153 SUDHL4_400M_050219_1,6153,RVNIPKVLR True True RVNIPKVLR 32.08479 365.576495349407 1864380.375 6150.0 ENSG00000070371|ENST00000427926|CLTCL1;;nc|ENSG00000070371|P53675-2|CLTCL1;;nc|ENSG00000141367|Q00610-2|CLTC;;ENSG00000141367|ENST00000269122|CLTC 6.620838642120361 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6154 32.093 458.0 125220.0 25 0 13099.0 + 43472 WVEAEQQFLQ 10 82 639.309863195158 1276.6051734571158 2 639.3094360232353 MULTI CID FTMS 0 0 0 6150 133407.5 0.8260541500608408 -2 0.0347137451171875 4 Unmodified _WVEAEQQFLQ_ REV__ENSG00000236761|ENST00000314099|CTAGE9;REV__ENSG00000271079|ENST00000420911|CTAGE15;REV__ENSG00000271321|ENST00000470691|CTAGE6;REV__nc|ENSG00000288784|Q8IX94|CTAGE4;REV__nc|ENSG00000289604|P0CG41|CTAGE8 36.506200033944 0.1944608063770638 5 {I|L}DADQ[KP]C{M(Oxidation (M))|F}{I|L}Q 11 -1 + 82.159 0.0 0.0 6.4358 6.4358 87.997 0.0 0.0 0.0 28.08092317009784 16.11819828617118 16.11819828617118 6.051985655421348 0 2.048455006504028 1.3010299956639813 0.0 1.048455006504028 {I|L}DADQ[KP]C{M(Oxidation (M))|F}{I|L}Q;{I|L}DWQ[KP]C{M(Oxidation (M))|F}{I|L}Q;{I|L}DAD{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}DW{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{I|L}WDQ[KP]C{M(Oxidation (M))|F}{I|L}Q;{I|L}WD{[WT]|[RM]}[C(Carbamidomethyl (C))R]{I|L}Q;{[QN]|[E{I|L}]|[KN]}[KT][MN]EGD{I|L}Q;{[QN]|[E{I|L}]|[KN]}[KT][MN]WD{I|L}Q;{[CA]|SS}{I|L}SG[RN][C(Carbamidomethyl (C))R]{I|L}Q 6.4358;5.9617;5.6299;5.1593;4.8046;4.0022;2.7508;2.7073;2.6201 -;-;-;-;-;-;-;-;- 334 + 1 2.269 50935.5 1.0 2087 4065 6150 SUDHL4_400M_050219_1,6154 SUDHL4_400M_050219_1,6154,WVEAEQQFLQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6155 32.107 800.0 197080.0 25 0 40588.0 19076 LDRKEELRL 9 120 586.3431606321769 1170.6717683311538 2 586.3436767458916 MULTI CID FTMS 0 0 0 6150 99668.09375 0.280767155924601 -3 0.0693817138671875 5 Unmodified _LDRKEELRL_ ENSG00000158428|ENST00000289388|CATIP 12.240655878213236 0.5053430591993562 5 R 1 8 11.109 0.0 0.0 0.94896 0.0 0.0 996.5599957254882 0.0 996.5599957254882 0.0 -9.736811325323329 -9.736811325323329 0.0 0 0.0 0.0 0.0 0.0 + R 0.94896 + + 48 + 1 2.269 121341.1 0.6200000047683716 2088 4065 6150 SUDHL4_400M_050219_1,6155 SUDHL4_400M_050219_1,6155,LDRKEELRL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6157 32.125 800.0 41935.0 25 0 10144.0 -1 0 38 1184.1304509528914 3549.369523458874 3 1184.466967761517 MULTI CID FTMS 0 0 0 6156 32628.6171875 0.3586843343776623 -1 0.0322990417480468 1 5 R 1 -1 4.6041 0.0 0.0 0.12972 0.0 0.0 2364.8017266832867 1025.4673555963502 3390.2690822796367 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.12972 - 1 + 1 2.292 37015.6 0.3899999856948852 2089 4066 6156 SUDHL4_400M_050219_1,6157 SUDHL4_400M_050219_1,6157, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6158 32.13 293.0 279410.0 25 0 28901.0 + 16124 ITSSAVTTALK 11 113 546.3189286769515 1090.6233044207029 2 546.3192626833916 MULTI CID FTMS 0 0 0 6156 204902.84375 0.0146986280574192 9 -0.4239616394042969 2 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 29.28111348798908 0.4046731465847057 5 {I|L}TSSAVTTA{I|L}K 11 0 + 90.541 0.0 0.0 8.3017 8.3017 98.724 0.0 0.0 0.0 76.68929876630041 11.959417110133288 11.959417110133288 90.54081754690232 0 0.4247425010840047 2.0 0.0 0.1861818737241735 + + {I|L}TSSAVTTA{I|L}K 8.3017 + + 133 + 1 2.292 67051.2 1.0 2090 4066 6156 SUDHL4_400M_050219_1,6158 SUDHL4_400M_050219_1,6158,ITSSAVTTALK False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_1 6159 32.135 288.0 265320.0 25 0 15597.0 + 33559 SILRHVAEV 9 102 512.3027306697601 1022.5909084063202 2 512.3011962771416 MULTI CID FTMS 0 0 0 6156 102460.625 0.5233894958780009 -1 0.0322990417480468 3 Unmodified _SILRHVAEV_ ENSG00000134001|ENST00000256383|EIF2S1 42.312485326615175 0.0627620958981271 5 {[TV]|[{I|L}S]}{I|L}RHVAEV 9 0 + 63.705 0.0 0.0 6.2298 6.2298 91.614 0.0 0.0 0.0 9.731975075880328 16.478174818886373 9.731975075880328 9.731975075880328 0 1.2568721510623968 2.0 0.3054621874040891 0.0 + + {[TV]|[{I|L}S]}{I|L}RHVAEV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]HVAEV;{NN|[MP]|[D{I|L}]|[EV]}A[{I|L}V]HKEV;{[TV]|[{I|L}S]}{I|L}RH[W{I|L}]V;[{I|L}T]VRHVAEV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}HVAEV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]H[W{I|L}]V;[TA]A{I|L}{I|L}HVAEV;{[CP]|[EA]}V[{I|L}V]HKEV;[{I|L}T]VRH[W{I|L}]V 6.2298;5.2781;3.9279;3.4809;3.0851;2.7335;2.5292;2.3944;2.0943;0.33626 +;-;-;-;-;-;-;-;-;- + 192 1 2.292 63560.2 1.0 2091 4066 6156 SUDHL4_400M_050219_1,6159 SUDHL4_400M_050219_1,6159,SILRHVAEV True True SILRHVAEV 32.135191 512.301196277142 828501.125 6156.0 ENSG00000134001|ENST00000256383|EIF2S1 5.079569657643636 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6160 32.145 568.0 223050.0 25 0 43760.0 + 33301 SFRYNGLIHR 10 127 421.5628385870245 1261.6666863612736 3 421.5631286501884 MULTI CID FTMS 0 0 0 6156 95440.5234375 1.0 0 0.0 4 Unmodified _SFRYNGLIHR_ ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28;nc|ENSG00000108107|P46779-4|RPL28;nc|ENSG00000108107|P46779-5|RPL28 33.82136114134338 0.222812100547209 5 G{I|L}{I|L}HR 5 5 38.984 0.0 0.0 3.0899 0.0 0.0 667.3061649763112 0.0 667.3061649763112 0.0 18.015384402724592 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + G{I|L}{I|L}HR 3.0899 + + 120 + 1 2.292 106824.9 1.0 2092 4066 6156 SUDHL4_400M_050219_1,6160 SUDHL4_400M_050219_1,6160,SFRYNGLIHR False True SFRYNGLIHR 32.145131 421.563128650188 376489.6875 6156.0 nc|ENSG00000108107|P46779-3|RPL28;;ENSG00000108107|ENST00000344063|RPL28;;nc|ENSG00000108107|P46779-4|RPL28;;nc|ENSG00000108107|P46779-2|RPL28;;nc|ENSG00000108107|P46779-5|RPL28 3.79920240243276 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6161 32.159 800.0 173800.0 25 0 16373.0 190 AAPGGPLK 8 145 710.4171462491447 709.4098697825447 1 710.4162475466728 MULTI CID FTMS 0 0 0 6156 149876.78125 0.6958909837918528 -14 0.7872753143310547 5 Unmodified _AAPGGPLK_ ENSG00000099617|ENST00000215368|EFNA2 2.889219685676258 0.8067950007271085 5 [{I|L}A]PAS 5 6 18.973 0.0 0.0 2.6745 0.0 0.0 0.0 267.1350191705688 267.1350191705688 7.515500066307336 0.0 0.0 0.0 0 0.5 0.0 0.5010912013506126 0.0 [{I|L}A]PAS 2.6745 - 198 + 1 2.292 104442.6 0.699999988079071 2093 4066 6156 SUDHL4_400M_050219_1,6161 SUDHL4_400M_050219_1,6161,AAPGGPLK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6162 32.163 192.0 385130.0 25 0 33123.0 + -1 KALPLCPQL 9 88 492.2830922628595 491.2758157962595 1 492.2815429568291 MULTI CID FTMS 0 0 0 6156 150907.15625 0.1945470979621142 7 -0.3726654052734375 6 nc|ENSG00000140853|Q86WI3-6|NLRC5;ENSG00000140853|ENST00000688547|NLRC5;ENST00000539881.5_1_16:57062253-57068433:+|nuORF;nc|ENSG00000140853|Q86WI3-4|NLRC5;nc|ENSG00000140853|Q86WI3-5|NLRC5;nc|ENSG00000140853|Q86WI3-2|NLRC5 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V 4 -1 + 23.188 0.0 0.0 4.7199 4.7199 80.35 0.0 0.0 0.0 3.182503180159344 6.134993639681312 3.182503180159344 3.182503180159344 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}V]QV;[{M(Oxidation (M))|F}V][AG]V 4.7199;4.0721;2.0936 -;-;- 38 1 2.292 65437.4 1.0 2094 4066 6156 SUDHL4_400M_050219_1,6162 SUDHL4_400M_050219_1,6162, False False KALPLCPQL 32.162645 492.281542956829 5899908.0 6156.0 nc|ENSG00000140853|Q86WI3-6|NLRC5;;ENSG00000140853|ENST00000688547|NLRC5;;ENST00000539881.5_1_16:57062253-57068433:+|nuORF;;nc|ENSG00000140853|Q86WI3-4|NLRC5;;nc|ENSG00000140853|Q86WI3-5|NLRC5;;nc|ENSG00000140853|Q86WI3-2|NLRC5 2.6880354086558023 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6163 32.171 448.0 135000.0 25 0 8398.5 + 24539 MKTKEMYFNVL 11 106 702.3549592707863 1402.6953656083724 2 702.3553954958916 MULTI CID FTMS 0 0 0 6156 128386.2265625 0.5929193964238888 -1 0.0322990417480468 7 Unmodified _MKTKEMYFNVL_ REV__ENST00000296509.10_1_4:120981100-120981202:-|nuORF 10.799506525563784 0.8105043987015127 5 {[TV]|[{I|L}S]}NWNGAQSTNV{I|L} 13 -1 + 93.631 0.0 0.0 6.6751 6.6751 83.729 0.0 0.0 0.0 12.997585348893494 16.642078980768062 12.997585348893494 1.4497910168700514 0 1.3601230898393752 1.6989700043360187 1.0994850021680094 0.7302046884880937 {[TV]|[{I|L}S]}NWNGAQSTNV{I|L};{[TV]|[{I|L}S]}KDD[PS]QSTNV{I|L};{[TV]|[{I|L}S]}N[EP]MAQSTNV{I|L};{[TV]|[{I|L}S]}NWNGAQSNTV{I|L};{[TV]|[{I|L}S]}N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PS]QSTNV{I|L};{[TV]|[{I|L}S]}KDD[PS]QSNTV{I|L};{[TV]|[{I|L}S]}GGWNGAQSTNV{I|L};{[TV]|[{I|L}S]}NWNGA[AG]STNV{I|L};{[TV]|[{I|L}S]}NWNGAQSTGGV{I|L};{[TV]|[{I|L}S]}KDD[PS]QSTGGV{I|L} 6.6751;6.5717;6.2182;6.1423;6.0408;6.0389;6.0283;6.0283;6.0283;5.925 -;-;-;-;-;-;-;-;-;- 9766 1 2.292 47710.0 1.0 2095 4066 6156 SUDHL4_400M_050219_1,6163 SUDHL4_400M_050219_1,6163,MKTKEMYFNVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6165 32.176 158.0 362970.0 25 0 28706.0 + 31578 RQPDSPTALY 10 91 574.2903252672164 1146.5660976012327 2 574.2902099490166 MULTI CID FTMS 0 0 0 6164 178448.9375 0.2359129929325658 5 -0.2734642028808594 1 Unmodified _RQPDSPTALY_ ENSG00000132382|ENST00000254718|MYBBP1A;ENST00000574547.5_1_17:4442712-4447986:-|nuORF;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 28.49450938151212 0.328477364964909 5 DM{I|L}Y 4 7 41.67 0.0 0.0 3.6343 0.0 0.0 606.3588734357437 0.0 606.3588734357437 0.0 31.670175336041453 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 DM{I|L}Y 3.6343 - 177 1 2.292 49532.7 1.0 2096 4067 6164 SUDHL4_400M_050219_1,6165 SUDHL4_400M_050219_1,6165,RQPDSPTALY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6166 32.182 332.0 321730.0 25 0 33341.0 + 3133 AVPPALRGP 9 118 439.2665232806816 876.5184936281631 2 439.2670165896416 MULTI CID FTMS 0 0 0 6164 109589.234375 0.0166571341374534 117 -3.543140411376953 2 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 5 {[VA]|[{I|L}G]}PPA 5 -1 37.408 0.0 0.0 4.2678 0.0 0.0 0.0 438.2464995246769 438.2464995246769 25.987805999182857 0.0 0.0 0.0 0 0.1694451763165201 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.2678 + + 92 + 1 2.292 89129.8 1.0 2097 4067 6164 SUDHL4_400M_050219_1,6166 SUDHL4_400M_050219_1,6166,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6167 32.185 155.0 543190.0 25 0 40423.0 + 22711 LQFPVGRVHR 10 110 403.57187042483815 1207.6937818747144 3 403.5717040896416 MULTI CID FTMS 0 0 0 6164 252093.171875 0.3222581588187084 -3 0.100006103515625 3 Unmodified _LQFPVGRVHR_ ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 26.020703789607367 0.3840598856887971 5 {I|L}Q{M(Oxidation (M))|F} 3 7 33.188 0.0 0.0 2.748 0.0 0.0 0.0 816.4594231010547 816.4594231010547 9.215365405321734 0.0 0.0 0.0 0 0.5 0.0 0.0 0.5 + {I|L}Q{M(Oxidation (M))|F} 2.748 + + 74 + 1 2.292 71042.6 1.0 2098 4067 6164 SUDHL4_400M_050219_1,6167 SUDHL4_400M_050219_1,6167,LQFPVGRVHR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6168 32.188 139.0 299440.0 25 0 34167.0 + 8871 FADHVSSSL 9 76 481.73289076027504 961.45122858735 2 481.7329284548759 MULTI CID FTMS 0 0 0 6164 234560.453125 0.7868014219992687 -1 0.0638275146484375 4 Unmodified _FADHVSSSL_ ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA 36.04419817259434 0.0971720506436186 5 S{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}S{I|L} 6 7 28.689 0.0 0.0 2.984 0.0 0.0 305.15949382348134 0.0 305.15949382348134 0.0 16.470996953088388 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 S{M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}S{I|L} 2.984 - 257 + 1 2.292 37324.2 1.0 2099 4067 6164 SUDHL4_400M_050219_1,6168 SUDHL4_400M_050219_1,6168,FADHVSSSL True True FADHVSSSL 32.188154 481.732928454876 1266939.375 6164.0 nc|ENSG00000164944|Q69YN4-4|VIRMA;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA 6.0003180503845215 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6169 32.19 110.0 489740.0 25 0 40128.0 + 25875 NLHNSYYSV 9 89 548.7562616428654 1095.4979703525307 2 548.7569457888603 MULTI CID FTMS 0 0 0 6164 166347.6875 1.0 0 0.0 5 Unmodified _NLHNSYYSV_ ENSG00000138764|ENST00000316355|CCNG2;ENST00000497512.5_1_4:78078410-78106259:+|nuORF;nc|ENSG00000138764|Q16589-2|CCNG2 27.628801355627647 0.1796483985696185 5 [{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}DDYW 8 6 + 35.608 0.0 0.0 3.2504 3.2504 78.106 0.0 0.0 0.0 1.1607435312808434 8.16061246681059 1.1607435312808434 4.498103176992171 0 0.4247425010840047 2.0 0.4247425010840047 0.0 [{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}DDYW;[HN]{I|L}NSYYSV;[HN]VQSYYSV;[HN]{I|L}GGSYYSV;{[NV]|[RG]}[PG]YSHHSV;{[NV]|[RG]}DE[RN]NHV;[HA][VG]NSYYSV;[VS]Y{[ES]|[DT]|[{I|L}C]}YYSV;{[CT]|[{M(Oxidation (M))|F}G]}YDD{[{M(Oxidation (M))|F}H]|[RQ]}PV;[HN]V[AG]SYYSV 3.2504;2.8398;2.2902;1.9992;1.9427;1.8531;1.5381;1.5082;1.4665;1.4497 -;-;-;-;-;-;-;-;-;- 339 1 2.292 46988.0 1.0 2100 4067 6164 SUDHL4_400M_050219_1,6169 SUDHL4_400M_050219_1,6169,NLHNSYYSV False True NLHNSYYSV 32.190485 548.75694578886 919003.8125 6164.0 ENSG00000138764|ENST00000316355|CCNG2;;nc|ENSG00000138764|Q16589-2|CCNG2;;ENST00000497512.5_1_4:78078410-78106259:+|nuORF 2.6893242994944253 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6170 32.204 800.0 222870.0 25 0 15512.0 25361 NAVLRKLL 8 162 463.81094256157934 925.6073321899588 2 463.8109619021416 MULTI CID FTMS 0 0 0 6164 130005.0703125 0.8586442391759318 -1 0.0638275146484375 6 Unmodified _NAVLRKLL_ ENSG00000198691|ENST00000370225|ABCA4 42.09456458481378 0.1992492688217789 5 {I|L}NG{I|L}KR{I|L}{I|L} 8 5 + 47.075 0.0 0.0 5.0858 5.0858 84.354 0.0 0.0 0.0 19.370015047994475 6.476888483188759 6.476888483188759 6.476888483188759 0 1.7511807292361734 0.7958800173440752 0.0 0.0 {I|L}NG{I|L}KR{I|L}{I|L};{[QG]|[NA]}V{I|L}KR{I|L}{I|L};{I|L}{I|L}[NG]KR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}KR{I|L}{I|L};[AG]GV{I|L}KR{I|L}{I|L};{I|L}A{[NV]|[RG]}KR{I|L}{I|L};{I|L}{I|L}[W{I|L}]R{I|L}{I|L};{[VA]|[{I|L}G]}N{I|L}KR{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}K[VG]{I|L}{I|L};[AG]VG{I|L}KR{I|L}{I|L} 5.0858;4.3861;3.9488;3.5442;3.4726;3.0195;2.9738;2.6504;2.5435;2.497 -;-;-;-;-;-;-;-;-;- 290 + 1 2.292 139900.4 0.5400000214576721 2101 4067 6164 SUDHL4_400M_050219_1,6170 SUDHL4_400M_050219_1,6170,NAVLRKLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6171 32.207 141.0 506440.0 25 0 69126.0 -1 0 77 517.2851187741504 516.2778423075504 1 517.2854492068291 MULTI CID FTMS 0 0 0 6164 376241.0 1.0 0 0.0 7 5 G 1 -1 5.4846 0.0 0.0 1.0623 0.0 0.0 91.11467810032224 365.1188753717407 456.2335534720629 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 1.0623 - 9 + 1 2.292 59194.7 1.0 2102 4067 6164 SUDHL4_400M_050219_1,6171 SUDHL4_400M_050219_1,6171, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6172 32.21 144.0 561560.0 25 0 75197.0 -1 LQKRCIHL 8 90 534.3092306892844 1066.6039084453687 2 534.3129760622978 MULTI CID FTMS 0 0 0 6164 362054.65625 1.0 0 0.0 8 Carbamidomethyl (C) _LQKRC(Carbamidomethyl (C))IHL_ ENSG00000163161|ENST00000285398|ERCC3;ENST00000426778.5_1_2:128015174-128051559:-|nuORF 5.760428011301431 0.7893668129297577 5 Y 1 -1 13.495 0.0 0.0 1.2652 0.0 0.0 885.5297945311094 0.0 885.5297945311094 0.0 11.90105620855803 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.2652 - 32 + 1 2.292 66134.7 1.0 2103 4067 6164 SUDHL4_400M_050219_1,6172 SUDHL4_400M_050219_1,6172,LQKRCIHL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6173 32.215 268.0 203280.0 25 0 16492.0 + 41947 VQIEEVRQV 9 90 550.3086152545735 1098.602677575947 2 550.3089477419853 MULTI CID FTMS 0 0 0 6164 169850.609375 1.0 0 0.0 9 Unmodified _VQIEEVRQV_ ENSG00000143621|ENST00000361891|ILF2 29.84058131909904 0.1515068451768857 5 {I|L}AREEV 6 6 48.664 0.0 0.0 4.4296 0.0 0.0 0.0 398.2150057428344 398.2150057428344 31.784569062443136 0.0 0.0 0.0 0 0.7059771852360797 1.0 0.0 0.0 {I|L}AREEV 4.4296 - 154 + 1 2.292 52164.9 1.0 2104 4067 6164 SUDHL4_400M_050219_1,6173 SUDHL4_400M_050219_1,6173,VQIEEVRQV False True VQIEEVRQV 32.21501 550.308947741985 841217.3125 6164.0 ENSG00000143621|ENST00000361891|ILF2 6.4389112790425616 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6174 32.229 800.0 85267.0 25 0 8749.8 + 2748 ATLEVAEYAME 11 107 613.7823144203757 0 613.7823974490166 PEAK CID FTMS 0 0 0 6164 103153.1328125 1.0 0 0.0 10 Unmodified _ATLEVAEYAME_ REV__ENSG00000147081|ENST00000358526|AKAP4;REV__nc|ENSG00000147081|Q5JQC9-2|AKAP4 8.745405648335112 0.4618489994582195 5 VGR 3 -1 17.664 0.0 0.0 1.4413 0.0 0.0 440.1410940152895 470.2072542779906 910.3483482932802 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 VGR 1.4413 - 170 + 1 2.292 56752.3 0.6200000047683716 2105 4067 6164 SUDHL4_400M_050219_1,6174 SUDHL4_400M_050219_1,6174,ATLEVAEYAME False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6175 32.243 800.0 108940.0 25 0 38032.0 38412 TRGGNSNG 8 76 762.3487713797186 761.3414949131186 1 762.3480102419853 MULTI CID FTMS 0 0 0 6164 94687.484375 1.0 0 0.0 11 Unmodified _TRGGNSNG_ ENSG00000115414|ENST00000354785|FN1;nc|ENSG00000115414|P02751-1|FN1;nc|ENSG00000115414|P02751-10|FN1;nc|ENSG00000115414|P02751-11|FN1;nc|ENSG00000115414|P02751-12|FN1;nc|ENSG00000115414|P02751-13|FN1;nc|ENSG00000115414|P02751-14|FN1;nc|ENSG00000115414|P02751-16|FN1;nc|ENSG00000115414|P02751-17|FN1;nc|ENSG00000115414|P02751-2|FN1;nc|ENSG00000115414|P02751-3|FN1;nc|ENSG00000115414|P02751-4|FN1;nc|ENSG00000115414|P02751-5|FN1;nc|ENSG00000115414|P02751-6|FN1;nc|ENSG00000115414|P02751-7|FN1;nc|ENSG00000115414|P02751-8|FN1;nc|ENSG00000115414|P02751-9|FN1 0.0 0.8243325171867699 5 C(Carbamidomethyl (C))NP{M(Oxidation (M))|F}PK 6 8 + 39.602 0.0 0.0 5.2016 5.2016 88.596 0.0 0.0 0.0 19.65595066891573 8.327731244245342 8.327731244245342 9.420080530223132 0 0.9247425010840048 0.0 0.0 0.0 C(Carbamidomethyl (C))NP{M(Oxidation (M))|F}PK;C(Carbamidomethyl (C))GGP{M(Oxidation (M))|F}PK;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[C(Carbamidomethyl (C))N]PK;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[MD][RP] 5.2016;3.9643;2.5125;1.4938 -;-;-;- 66 + 1 2.292 69989.7 0.5899999737739563 2106 4067 6164 SUDHL4_400M_050219_1,6175 SUDHL4_400M_050219_1,6175,TRGGNSNG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6177 32.251 260.0 219370.0 25 0 30744.0 19255 LEKERVKP 8 107 499.8035498397391 997.592546746278 2 499.8036682009697 MULTI CID FTMS 0 0 0 6176 68697.9296875 0.0823754025121208 4 -0.2013778686523437 1 Unmodified _LEKERVKP_ ENST00000391835.1_1_19:50380463-50380886:-|nuORF 7.910154910731844 0.7763180056447161 5 {M(Oxidation (M))|F} 1 8 11.99 0.0 0.0 1.2019 0.0 0.0 832.5132295849485 0.0 832.5132295849485 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2019 - 87 + 1 2.306 48626.3 1.0 2107 4068 6176 SUDHL4_400M_050219_1,6177 SUDHL4_400M_050219_1,6177,LEKERVKP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6178 32.254 123.0 352190.0 25 0 41088.0 + 8854 EYVSSQLGRP 10 71 568.2925024595065 1134.570451985813 2 568.2926513552666 MULTI CID FTMS 0 0 0 6176 390952.90625 1.0 0 0.0 2 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 12.240655878213236 0.6421556946785427 5 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 8 -1 29.628 0.0 0.0 2.6114 0.0 0.0 244.1424363918444 0.0 244.1424363918444 0.0 18.03395642852614 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 {M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 2.6114 - 87 + 1 2.306 37629.3 1.0 2108 4068 6176 SUDHL4_400M_050219_1,6178 SUDHL4_400M_050219_1,6178,EYVSSQLGRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6179 32.255 41.0 1687900.0 25 0 194560.0 + 16986 KIWDPVHRV 9 83 383.8889903080898 0 383.8889037966728 PEAK CID FTMS 0 0 0 6176 1018416.875 0.8495811967371667 -1 0.0720863342285156 3 Unmodified _KIWDPVHRV_ ENSG00000134900|ENST00000376052|TPP2;nc|ENSG00000134900|P29144|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 34.221707139014875 0.0901242239663321 5 PVVS 4 7 14.17 0.0 0.0 1.8505 0.0 0.0 159.40348021462654 221.1183718317016 380.52185204632815 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 PVVS 1.8505 - 84 + 1 2.306 63636.8 1.0 2109 4068 6176 SUDHL4_400M_050219_1,6179 SUDHL4_400M_050219_1,6179,KIWDPVHRV True True KIWDPVHRV 32.255099 383.888903796673 10493388.75 6176.0 nc|ENSG00000134900|P29144|TPP2;;ENSG00000134900|ENST00000376052|TPP2;;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 5.4331380526224775 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6180 32.257 74.0 989530.0 25 0 97983.0 + 15855 ISNEFKVEV 9 104 532.7845593645503 1063.5545657959003 2 532.7849609255791 MULTI CID FTMS 0 0 0 6176 775556.8125 0.0277583203899438 -3 0.168212890625 4 Unmodified _ISNEFKVEV_ ENSG00000171603|ENST00000377298|CLSTN1;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;nc|ENSG00000171603|O94985-2|CLSTN1 58.6788170122104 0.0268135626297836 5 [AG]GEY[K{I|L}]VEV 10 5 + 70.866 0.0 0.0 6.6631 6.6631 82.717 0.0 0.0 0.0 0.6092167556056722 16.532125137753432 0.6092167556056722 0.6092167556056722 0 1.1989700043360187 0.7958800173440752 1.066901560044258 0.7742275032520141 [AG]GEY[K{I|L}]VEV;{[QG]|[NA]}EY[K{I|L}]VEV;[YE]GQ[K{I|L}]VEV;[AG]GEYV[K{I|L}]EV;[AG]GEVY[K{I|L}]EV;{[QG]|[NA]}EYV[K{I|L}]EV;{[QG]|[NA]}EVY[K{I|L}]EV;[AG]GEV[K{I|L}]YEV;{[QG]|[NA]}EV[K{I|L}]YEV;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}Y[K{I|L}]EV 6.6631;6.6058;5.2116;5.0578;5.0578;5.0005;5.0005;4.9403;4.883;4.8638 -;-;-;-;-;-;-;-;-;- 454 1 2.306 63641.5 1.0 2110 4068 6176 SUDHL4_400M_050219_1,6180 SUDHL4_400M_050219_1,6180,ISNEFKVEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6181 32.259 106.0 587000.0 25 0 75936.0 + 16985 KIWDPVHRV 9 96 575.3303110784013 1148.6460692236026 2 575.3295165896416 MULTI CID FTMS 0 0 0 6176 339280.9375 0.6408562182235192 -1 0.0720863342285156 5 Unmodified _KIWDPVHRV_ ENSG00000134900|ENST00000376052|TPP2;nc|ENSG00000134900|P29144|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 32.89776655970281 0.1144444835665315 5 K{I|L}WDVPH[RV] 9 2 + 59.479 0.0 0.0 5.1782 5.1782 84.468 0.0 0.0 0.0 43.37758990359475 5.696487153159673 5.696487153159673 6.154470257209965 0 1.6861818737241734 0.0 0.0 0.3054621874040891 K{I|L}WDVPH[RV];K{I|L}WDVH{I|L}A[PA];K{I|L}{[DA]|[EG]}DVPH[RV];K{I|L}WDVH[PA][{I|L}A];K{I|L}W{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PG][RV];K{I|L}V{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S[PG][RV];K{I|L}V[WD]PH[RV];K{I|L}{[DA]|[EG]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[PG][RV];K{I|L}V[WD]H{I|L}A[PA];K{I|L}V[WD]H[PA][{I|L}A] 5.1782;4.6424;4.3765;4.1611;3.6036;2.9752;2.8407;2.8019;2.5708;2.0895 -;-;-;-;-;-;-;-;-;- 425 + 1 2.306 52943.8 1.0 2111 4068 6176 SUDHL4_400M_050219_1,6181 SUDHL4_400M_050219_1,6181,KIWDPVHRV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6182 32.261 105.0 632100.0 25 0 34907.0 + 30872 RIMSGESTF 9 101 514.2475003871168 1026.4804478410335 2 514.2476684451103 MULTI CID FTMS 0 0 0 6176 301913.71875 0.3344886715322179 -2 0.1359138488769531 6 Unmodified _RIMSGESTF_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 34.93206674587334 0.1032771302489716 5 [{I|L}V]{[MG]|[TS]}SWST{M(Oxidation (M))|F} 9 4 + 51.085 0.0 0.0 4.9767 4.9767 77.596 0.0 0.0 0.0 6.989700043360188 14.09256854528806 6.989700043360188 0.4575749056067479 0 1.0 1.6989700043360187 0.805462187404089 0.0 [{I|L}V]{[MG]|[TS]}SWST{M(Oxidation (M))|F};[{I|L}V]{[MG]|[TS]}SGEST{M(Oxidation (M))|F};[{I|L}V]{[MG]|[TS]}SGTDT{M(Oxidation (M))|F};{I|L}{I|L}{[CA]|SS}SWST{M(Oxidation (M))|F};{I|L}{I|L}{[CA]|SS}SGEST{M(Oxidation (M))|F};{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}WST{M(Oxidation (M))|F};[R{I|L}]MSGEST{M(Oxidation (M))|F};{I|L}{I|L}{[CA]|SS}SGTDT{M(Oxidation (M))|F};{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}C(Carbamidomethyl (C))DT{M(Oxidation (M))|F};[VS]M{[QV]|[N{I|L}]|[RA]|[KV]}EST{M(Oxidation (M))|F} 4.9767;4.9322;4.4673;4.2958;4.2512;3.958;3.8808;3.7864;3.4433;3.426 -;-;-;-;-;-;+;-;-;- + 960 1 2.306 58671.0 1.0 2112 4068 6176 SUDHL4_400M_050219_1,6182 SUDHL4_400M_050219_1,6182,RIMSGESTF True True RIMSGESTF 32.261341 514.24766844511 10810141.0 6176.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 4.655856768290202 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6183 32.275 800.0 147110.0 25 0 9763.0 + -1 QELWPQNRMCQ 11 116 745.3390765818416 1488.663600230483 2 745.3398315310478 MULTI CID FTMS 0 0 0 6176 168904.25 0.1447130412171182 8 -0.318328857421875 7 Carbamidomethyl (C) _QELWPQNRMC(Carbamidomethyl (C))Q_ REV__ENSG00000126464|ENST00000418929|PRR12;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12 7.101721422024254 0.8416415510090076 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VYEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 79.446 0.0 0.0 5.3367 5.3367 86.972 0.0 0.0 0.0 12.1458401209523 31.44534562012769 12.1458401209523 9.098233696509112 0 0.8935078169319297 0.0 0.2396518287104437 1.4291746928241125 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VYEAQQNA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VYEAQQGGA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VYEAQ[AG]NA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VYEA[AG]QNA{M(Oxidation (M))|F}Y;{[QV]|[N{I|L}]|[RA]|[KV]}EYEAQQNA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}AQQNA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[WY]QQNA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VYEAQ[AG]GGA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VYEA[AG]QGGA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VYEA[AG][AG]NA{M(Oxidation (M))|F}Y 5.3367;4.7256;4.7256;4.7256;4.4145;4.3977;4.1557;4.1161;4.1161;4.1161 -;-;-;-;-;-;-;-;-;- 5989 1 2.306 85021.0 0.75 2113 4068 6176 SUDHL4_400M_050219_1,6183 SUDHL4_400M_050219_1,6183,QELWPQNRMCQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6184 32.28 231.0 385860.0 25 0 14714.0 + 26228 NQIRPGLQY 9 117 544.7953204202524 1087.5760879073048 2 544.7958251833916 MULTI CID FTMS 0 0 0 6176 149369.75 0.144716201554246 -3 0.168212890625 8 Unmodified _NQIRPGLQY_ ENSG00000165209|ENST00000348403|STRBP;nc|ENSG00000165209|Q96SI9-2|STRBP 107.99703571036002 0.0067560930197464 5 [AG]N{I|L}R[PG]{I|L}QY 10 3 + 68.024 0.0 0.0 6.2547 6.2547 83.712 0.0 0.0 0.0 2.253092817258633 16.53212513775344 2.253092817258633 2.253092817258633 0 1.6861818737241734 1.5228787452803376 0.0 1.4049471895720984 [AG]N{I|L}R[PG]{I|L}QY;GGQ{I|L}R[PG]{I|L}QY;{[QN]|[E{I|L}]|[KN]}{I|L}R[PG]{I|L}QY;[AG]N{I|L}[VG][PG]{I|L}QY;[AG]N{I|L}R[PG]{I|L}[AG]Y;[AG]N{I|L}[VP]{I|L}NQY;GGQ{I|L}R[PG]{I|L}[AG]Y;GGQ{I|L}[VG][PG]{I|L}QY;[AG]GG{I|L}R[PG]{I|L}QY;GGQ{I|L}[VP]{I|L}NQY 6.2547;6.0475;5.7796;5.412;5.412;5.2226;5.2048;5.2048;5.062;5.0155 -;-;+;-;-;-;-;-;-;- + 1167 1 2.306 69787.6 1.0 2114 4068 6176 SUDHL4_400M_050219_1,6184 SUDHL4_400M_050219_1,6184,NQIRPGLQY True True NQIRPGLQY 32.27953 544.795825183392 13152292.0 6176.0 ENSG00000165209|ENST00000348403|STRBP;;nc|ENSG00000165209|Q96SI9-2|STRBP 7.033892472585042 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6185 32.293 800.0 175960.0 25 0 33610.0 + 22713 LQFPVGRVHR 10 131 604.8544981305961 1207.694443327992 2 604.8540527224541 MULTI CID FTMS 0 0 0 6176 98310.8359375 0.6718723237309066 -1 0.0720863342285156 9 Unmodified _LQFPVGRVHR_ ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 37.77132515983256 0.1811013699114492 5 {I|L}Q{M(Oxidation (M))|F}R 4 6 45.918 0.0 0.0 3.8021 0.0 0.0 0.0 660.3636568658811 660.3636568658811 11.308422131034844 0.0 0.0 0.0 0 1.0 0.0 0.0 1.0 {I|L}Q{M(Oxidation (M))|F}R 3.8021 - 174 + 1 2.306 103277.6 0.5899999737739563 2115 4068 6176 SUDHL4_400M_050219_1,6185 SUDHL4_400M_050219_1,6185,LQFPVGRVHR False True LQFPVGRVHR 32.293361 604.854052722454 12195266.75 6176.0 nc|ENSG00000246705|Q9BTM1-2|H2AJ;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000274997|ENST00000377459|H2AC12;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000196747|ENST00000358739|H2AC13;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000184270|ENST00000331128|H2AC21;;ENSG00000276903|ENST00000613174|H2AC16;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000180573|ENST00000377791|H2AC6;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000246705|ENST00000544848|H2AJ 5.482487837473552 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6186 32.297 168.0 506180.0 25 0 79014.0 -1 0 88 474.24456339414473 473.2372869275448 1 474.2446472048759 MULTI CID FTMS 0 0 0 6176 163516.421875 0.7525018677630921 -1 0.0720863342285156 10 5 {M(Oxidation (M))|F} 1 -1 9.7539 0.0 0.0 2.0611 0.0 0.0 308.1583207183635 0.0 308.1583207183635 0.0 0.2210183124602682 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.0611 - 21 + 1 2.306 71057.3 1.0 2116 4068 6176 SUDHL4_400M_050219_1,6186 SUDHL4_400M_050219_1,6186, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6187 32.31 800.0 186440.0 25 0 11689.0 + 31347 RMSDVVKGVY 10 141 577.3052083273615 1152.5958637215228 2 577.3052245974541 MULTI CID FTMS 0 0 0 6176 135640.484375 1.0 0 0.0 11 Unmodified _RMSDVVKGVY_ ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-5|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4 38.61474834105838 0.1721950110283317 5 [VG]G[{M(Oxidation (M))|F}E]VVKGVY 11 5 + 70.213 0.0 0.0 6.0918 6.0918 91.376 0.0 0.0 0.0 9.885705382192183 15.070623213458036 9.885705382192183 9.885705382192183 0 1.274227503252014 2.0 0.4247425010840047 0.3494850021680094 [VG]G[{M(Oxidation (M))|F}E]VVKGVY;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))E]|[WC]}VVKGVY;[VG][TP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VKGVY;{[NV]|[RG]}[{M(Oxidation (M))|F}E]VVKGVY;[VG]GV{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}KGVY;[VG]G[{M(Oxidation (M))|F}E]VVKRY;[VG][R{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]}KGVY;[VG][TP][W{M(Oxidation (M))|F}]KGVY;{[TV]|[{I|L}S]}V{[C(Carbamidomethyl (C))E]|[WC]}VKGVY;[VG]G[H{I|L}][HS]KGVY 6.0918;5.2341;4.937;4.688;4.5306;4.481;4.4168;4.3665;4.3305;4.3122 -;-;-;-;-;-;-;-;-;- 550 1 2.306 114194.2 0.6399999856948853 2117 4068 6176 SUDHL4_400M_050219_1,6187 SUDHL4_400M_050219_1,6187,RMSDVVKGVY False True RMSDVVKGVY 32.310472 577.305224597454 665559.0625 6176.0 nc|ENSG00000161813|Q71RC2-4|LARP4;;nc|ENSG00000161813|Q71RC2-3|LARP4;;nc|ENSG00000161813|Q71RC2-2|LARP4;;nc|ENSG00000161813|Q71RC2-5|LARP4;;nc|ENSG00000161813|Q71RC2-6|LARP4;;ENSG00000161813|ENST00000398473|LARP4 6.6860785484313965 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6188 32.315 244.0 351980.0 25 0 123430.0 + 8558 AATEIVERV 9 96 494.2575336729945 0 494.2568542361259 PEAK CID FTMS 0 0 0 6176 120173.828125 0.9598840869255704 -1 0.0720863342285156 12 Unmodified _ETKQPNSAI_ nc|ENSG00000149823|Q9UID3-2|VPS51;ENSG00000149823|ENST00000279281|VPS51 13.50788311687929 0.2720325786695375 5 TE{I|L}VE 5 8 16.682 0.0 0.0 1.6911 0.0 0.0 142.0364774028265 270.15647302799067 412.1929504308172 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TE{I|L}VE 1.6911 - 54 + 1 2.306 71462.2 1.0 2118 4068 6176 SUDHL4_400M_050219_1,6188 SUDHL4_400M_050219_1,6188,ETKQPNSAI False False AATEIVERV 32.315021 494.256854236126 1243274.375 6176.0 nc|ENSG00000149823|Q9UID3-2|VPS51;;ENSG00000149823|ENST00000279281|VPS51 6.358841101328532 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6190 32.331 800.0 42346.0 25 0 9900.9 -1 0 31 1120.1486992402845 3357.424268321053 3 1120.818164050579 MULTI CID FTMS 0 0 0 6189 118178.375 1.0 0 0.0 1 5 W 1 -1 6.9897 0.0 0.0 0.20819 0.0 0.0 2237.9143328735904 930.4274386041624 3168.341771477753 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.20819 - 7 + 1 2.306 39418.0 0.4099999964237213 2119 4069 6189 SUDHL4_400M_050219_1,6190 SUDHL4_400M_050219_1,6190, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6191 32.333 55.0 1512300.0 25 0 140280.0 + 40528 VIWGKVTRA 9 75 515.3138164538171 1028.6130799744342 2 515.3140746951103 MULTI CID FTMS 0 0 0 6189 974947.0 0.7632804563256049 -1 0.07232666015625 2 Unmodified _VIWGKVTRA_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 23.78978130925829 0.2284941198415988 5 V{I|L}WGKV 6 3 72.652 0.0 0.0 7.0631 0.0 0.0 0.0 343.17429529361567 343.17429529361567 59.55259398656281 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + V{I|L}WGKV 7.0631 + + 93 + 1 2.306 70549.6 1.0 2120 4069 6189 SUDHL4_400M_050219_1,6191 SUDHL4_400M_050219_1,6191,VIWGKVTRA False True VIWGKVTRA 32.332842 515.31407469511 6711766.0 6189.0 ENSG00000182899|ENST00000647248|RPL35A;;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 5.529641787211101 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6192 32.347 800.0 159830.0 25 0 11999.0 + 41982 VQMHKMKQCLQ 11 134 731.8511142646759 1461.6876755961516 2 731.8520385622978 MULTI CID FTMS 0 0 0 6189 154438.453125 0.9343378379911292 -1 0.07232666015625 3 Carbamidomethyl (C),2 Oxidation (M) _VQM(Oxidation (M))HKM(Oxidation (M))KQC(Carbamidomethyl (C))LQ_ REV__ENSG00000106546|ENST00000242057|AHR 56.17704186161178 0.0846604386095034 5 {[QV]|[N{I|L}]|[RA]|[KV]}NEM[EP][NG]G{M(Oxidation (M))|F}{I|L}Q 13 -1 + 85.697 0.0 0.0 5.8629 5.8629 80.94 0.0 0.0 0.0 13.19437197809104 40.69942923479236 13.19437197809104 0.9017663034908736 0 2.5 2.0 0.0 2.028659694992122 {[QV]|[N{I|L}]|[RA]|[KV]}NEM[EP][NG]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]G{[VA]|[{I|L}G]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEM[EP]{M(Oxidation (M))|F}NN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]G{M(Oxidation (M))|F}{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}N[HN][YK]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEM[EP]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}D{[SA]|[TG]}V{[{M(Oxidation (M))|F}H]|[RQ]}DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[WD]G{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}Q 5.8629;5.8012;5.7232;5.7139;5.6597;5.6338;5.6144;5.5548;5.5405;5.4748 -;-;-;-;-;-;-;-;-;- 14542 1 2.306 96721.8 0.7099999785423279 2121 4069 6189 SUDHL4_400M_050219_1,6192 SUDHL4_400M_050219_1,6192,VQMHKMKQCLQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6193 32.355 456.0 128080.0 25 0 16956.0 + 22806 LQYMFSYFF 9 96 623.2836496386847 1244.5527463441692 2 623.2836791872978 MULTI CID FTMS 0 0 0 6189 135469.640625 1.0 0 0.0 4 Unmodified _LQYMFSYFF_ REV__ENSG00000104047|ENST00000403028|DTWD1;REV__nc|ENSG00000104047|Q8N5C7-2|DTWD1 4.3292370932331545 0.7635526921153418 5 [Q{I|L}]V 3 -1 12.319 0.0 0.0 0.98987 0.0 0.0 0.0 901.3179495514536 901.3179495514536 1.481938206379667 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 [Q{I|L}]V 0.98987 - 56 1 2.306 48761.4 1.0 2122 4069 6189 SUDHL4_400M_050219_1,6193 SUDHL4_400M_050219_1,6193,LQYMFSYFF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6194 32.369 800.0 97209.0 25 0 28053.0 -1 0 40 1188.816722280062 3563.4283374403867 3 1189.480273425579 MULTI CID FTMS 0 0 0 6189 145113.984375 0.4031810219643543 -17 0.9955158233642578 5 5 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.30782 0.0 0.0 1999.693670547612 1356.615726336805 3356.309396884417 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.30782 - 13 + 1 2.306 72249.0 0.4900000095367431 2123 4069 6189 SUDHL4_400M_050219_1,6194 SUDHL4_400M_050219_1,6194, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6195 32.379 609.0 177100.0 25 0 11291.0 + + 8551 KLPETTVTY 9 141 526.2863180470451 1050.5580831608902 2 526.2874633669853 MULTI CID FTMS 0 0 0 6189 115698.125 1.0 0 0.0 6 Unmodified _ETILVGVGTY_ ENST00000441774.1_1_7:150922068-150924001:-|nuORF 37.97399986684836 0.1789611706409123 5 {[ET]|[MV]}PTV[K{I|L}]TY 9 -1 + 47.003 0.0 0.0 4.4741 4.4741 57.621 0.0 0.0 0.0 1.869548007497137 3.80652299982426 1.869548007497137 0.0 0 1.0 0.0 2.2856668758921828 0.0 {[ET]|[MV]}PTV[K{I|L}]TY;{[ET]|[MV]}PT[K{I|L}]VTY;[EP]TTV[K{I|L}]TY;[EP]TT[K{I|L}]VTY;[KS][KP]TVQTY;{[ET]|[MV]}PTVT[K{I|L}]Y;[QA][K{I|L}]TVQTY;[QA]TV[K{I|L}]QTY;[QA]T[K{I|L}]VQTY;[EP]TTVT[K{I|L}]Y 4.4741;4.4741;4.2961;4.2961;4.1118;3.9982;3.8252;3.8252;3.8252;3.8202 -;-;-;-;-;-;-;-;-;- 858 1 2.306 89459.0 1.0 2124 4069 6189 SUDHL4_400M_050219_1,6195 SUDHL4_400M_050219_1,6195,ETILVGVGTY False False KLPETTVTY 32.379286 526.287463366985 1012974.625 6189.0 ENST00000441774.1_1_7:150922068-150924001:-|nuORF 2.3017826875050864 2.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6197 32.393 563.0 102410.0 25 0 8501.9 + 1657 ALNENINQV 9 103 507.7642808704967 1013.5140088077934 2 507.7643615603447 MULTI CID FTMS 0 0 0 6196 49931.22265625 0.0629887167033411 3 -0.1002655029296875 1 Unmodified _ALNENINQV_ ENSG00000125779|ENST00000610179|PANK2;nc|ENSG00000125779|Q9BZ23-2|PANK2;nc|ENSG00000125779|Q9BZ23-3|PANK2;nc|ENSG00000125779|Q9BZ23|PANK2 25.399314129420983 0.2080152500878129 5 [{I|L}A]N 3 6 22.676 0.0 0.0 2.2374 0.0 0.0 0.0 712.3271551303121 712.3271551303121 2.367282444438548 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [{I|L}A]N 2.2374 + + 305 1 2.304 48590.1 1.0 2125 4070 6196 SUDHL4_400M_050219_1,6197 SUDHL4_400M_050219_1,6197,ALNENINQV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6198 32.4 381.0 174980.0 25 0 8221.1 -1 LDCRNVDRNVL 11 96 687.3493039599375 1372.684054986675 2 687.3488647341728 MULTI CID FTMS 0 0 0 6196 218725.671875 0.3639607525548726 -3 0.2085723876953125 2 Carbamidomethyl (C) _LDC(Carbamidomethyl (C))RNVDRNVL_ ENST00000289968.10_1_16:24930781-24931099:-|nuORF;ENST00000537417.1_16:24930737-24931099:-|nuORF 20.41453444215458 0.6105011870913812 5 DPSQSANV{I|L} 9 -1 78.044 0.0 0.0 5.6855 0.0 0.0 443.23848159004064 0.0 443.23848159004064 0.0 59.16992713939968 0.0 0.0 0 0.75 0.0 1.5941876774005248 0.4247425010840047 DPSQSANV{I|L} 5.6855 - 3077 1 2.304 52639.3 1.0 2126 4070 6196 SUDHL4_400M_050219_1,6198 SUDHL4_400M_050219_1,6198,LDCRNVDRNVL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6199 32.404 249.0 169690.0 25 0 21788.0 + 33665 SIVDPQNQTM 10 79 566.7682701797771 1131.521987426354 2 566.7692748904228 MULTI CID FTMS 0 0 0 6196 178431.203125 0.8114455809189015 -2 0.1364860534667968 3 Unmodified _SIVDPQNQTM_ ENSG00000169230|ENST00000303204|PRELID1;ENST00000511309.5_1_5:176730986-176733129:+|nuORF;nc|ENSG00000169230|Q9Y255-2|PRELID1 24.020572477871973 0.4289996903560794 5 {[QN]|[E{I|L}]|[KN]}PQ[EP]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 7 + 32.425 0.0 0.0 2.8656 2.8656 80.13 0.0 0.0 0.0 8.538719643217622 5.6424927368726046 5.6424927368726046 8.538719643217622 0 0.0 0.8538719643217619 0.0 0.7742275032520141 {[QN]|[E{I|L}]|[KN]}PQ[EP]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[QP]NQ[EP]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}P[AG][EP]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}C]|[YS]}{[QD]|[EN]|[WG]|[KD]|[RS]}Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}P{I|L}{I|L}[C(Carbamidomethyl (C))M]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[PA]GNQ[EP]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T][MN]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}PD[{M(Oxidation (M))|F}V]R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[QP]GGQ[EP]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[QP]N[AG][EP]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.8656;2.111;2.0518;1.8888;1.6504;1.5019;1.408;1.3404;1.2972;1.2972 -;-;-;-;-;-;-;-;-;- 306 1 2.304 37888.4 1.0 2127 4070 6196 SUDHL4_400M_050219_1,6199 SUDHL4_400M_050219_1,6199,SIVDPQNQTM False True SIVDPQNQTM 32.404434 566.769274890423 1918054.875 6196.0 ENST00000511309.5_1_5:176730986-176733129:+|nuORF;;ENSG00000169230|ENST00000303204|PRELID1;;nc|ENSG00000169230|Q9Y255-2|PRELID1 4.219605207443237 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6200 32.418 800.0 74177.0 25 0 3358.9 + -1 KECYEPADHQQ 11 112 702.7941803130408 1403.5738076928817 2 702.7944213747978 MULTI CID FTMS 0 0 0 6196 92431.21875 1.0 0 0.0 4 Carbamidomethyl (C) _KEC(Carbamidomethyl (C))YEPADHQQ_ REV__chr13:46344831-46349286|46|25.39|0.99|4.68|-|ENST00000417405|RUBCNL,RUBCNL;REV__nc|ENSG00000102445|Q9H714-4|RUBCNL 6.630372943996041 0.8438654038452725 5 [AG]S{M(Oxidation (M))|F}{M(Oxidation (M))|F}AATEN 10 -1 23.395 0.0 0.0 1.6668 0.0 0.0 0.0 405.1356112419628 405.1356112419628 7.910707272628915 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3252574989159953 0.0 [AG]S{M(Oxidation (M))|F}{M(Oxidation (M))|F}AATEN 1.6668 - 723 1 2.304 48563.6 0.5899999737739563 2128 4070 6196 SUDHL4_400M_050219_1,6200 SUDHL4_400M_050219_1,6200,KECYEPADHQQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6201 32.424 319.0 230740.0 25 0 10003.0 + 2951 AVHPGNMMY 9 121 510.2255982433779 1018.4366435535558 2 510.2256042361259 MULTI CID FTMS 0 0 0 6196 93811.34375 0.982617166962282 -2 0.1364860534667968 5 Unmodified _AVHPGNMMY_ ENSG00000186153|ENST00000566780|WWOX;ENST00000569332.5_1_16:78133625-79245690:+|nuORF;nc|ENSG00000186153|Q9NZC7-2|WWOX 11.640296217721598 0.521594087909532 5 MMY 3 6 31.198 0.0 0.0 3.0633 0.0 0.0 575.2837883721094 0.0 575.2837883721094 0.0 10.28273777167044 0.0 0.0 0 0.5 0.0 0.0 0.0 + MMY 3.0633 + + 125 1 2.304 63671.4 1.0 2129 4070 6196 SUDHL4_400M_050219_1,6201 SUDHL4_400M_050219_1,6201,AVHPGNMMY False True AVHPGNMMY 32.424063 510.225604236126 658592.0625 6196.0 ENSG00000186153|ENST00000566780|WWOX;;ENST00000569332.5_1_16:78133625-79245690:+|nuORF;;nc|ENSG00000186153|Q9NZC7-2|WWOX -0.110192060470581 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6202 32.438 800.0 98126.0 25 0 8326.4 20936 LNEISEETTIQ 11 104 638.8179682687637 1275.621383604327 2 638.8181030154228 MULTI CID FTMS 0 0 0 6196 84562.8671875 0.8454497403635434 1 -0.058502197265625 6 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 45.739877483867886 0.1412225664835785 5 {I|L}NADQ[TA][YR]PQ 11 8 + 65.424 0.0 0.0 5.1288 5.1288 81.547 0.0 0.0 0.0 4.960669370443398 6.970553262775923 4.960669370443398 3.059043370502934 0 1.3807196863200843 1.2218487496163564 0.4247425010840047 0.805462187404089 {I|L}NADQ[TA][YR]PQ;{[QV]|[N{I|L}]|[RA]|[KV]}A[YT][PG]EGN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}A[YT][PG]WN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}A[YT][WP]GN{I|L}Q;{I|L}NWQ[TA][YR]PQ;[{I|L}P]E[YT]{I|L}EGN{I|L}Q;{I|L}NW{[WN]|[YH]}[YR]PQ;{I|L}NWQP[KT][C(Carbamidomethyl (C))M]V;{I|L}NWQN[{I|L}V][C(Carbamidomethyl (C))M]V;{[QN]|[E{I|L}]|[KN]}[KT][MN]EGN{I|L}Q 5.1288;4.889;4.7447;4.6067;4.5508;3.7608;3.7058;3.3153;3.2943;3.0999 -;-;-;-;-;-;-;-;-;- 570 + 1 2.304 67560.3 0.550000011920929 2130 4070 6196 SUDHL4_400M_050219_1,6202 SUDHL4_400M_050219_1,6202,LNEISEETTIQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6204 32.442 40.0 1216900.0 25 0 63042.0 + 16837 KIAPNTPQL 9 82 491.2899655761149 980.56537821903 2 491.2900573611259 MULTI CID FTMS 0 0 0 6203 1373283.625 0.7743754539282557 1 -0.0063896179199218 1 Unmodified _KIAPNTPQL_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 60.07390631473393 0.0260411565414776 5 [QP]{I|L}GKTP[Q{I|L}] 9 5 + 51.913 0.0 0.0 5.2942 5.2942 83.703 0.0 0.0 0.0 16.659525765963238 22.237307718606893 16.659525765963238 4.596667707322112 0 0.8494850021680094 1.3979400086720375 0.4247425010840047 0.6139829889124311 [QP]{I|L}GKTP[Q{I|L}];[QP]SA[K{I|L}]P[Q{I|L}];[QP]SK[{I|L}A]P[Q{I|L}];[Q{I|L}]PGKTP[Q{I|L}];[NP]TA[K{I|L}]P[Q{I|L}];[NP][{I|L}A]KTP[Q{I|L}];[NP]TK[{I|L}A]P[Q{I|L}];[QP]{I|L}[{I|L}A][QA][Q{I|L}];[Q{I|L}][QA][{I|L}A]P[Q{I|L}] 5.2942;4.8254;4.3195;3.0067;2.7857;2.5703;2.2798;0.64465;0.32793 -;-;-;-;-;-;-;-;- 352 1 2.304 42507.3 1.0 2131 4071 6203 SUDHL4_400M_050219_1,6204 SUDHL4_400M_050219_1,6204,KIAPNTPQL True True KIAPNTPQL 32.442469 491.290057361126 11838980.0 6203.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 5.178436438242595 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6205 32.444 78.0 738760.0 25 0 74470.0 + 22712 LQFPVGRVHR 10 73 403.57187042483815 1207.6937818747144 3 403.5718261599541 MULTI CID FTMS 0 0 0 6203 554080.75 0.7082978130816899 1 -0.0063896179199218 2 Unmodified _LQFPVGRVHR_ ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 26.020703789607367 0.3840598856887971 5 {I|L}Q{M(Oxidation (M))|F} 3 7 33.188 0.0 0.0 2.748 0.0 0.0 0.0 816.4604181643202 816.4604181643202 7.442190502882156 0.0 0.0 0.0 0 0.5 0.0 0.0 0.5 + {I|L}Q{M(Oxidation (M))|F} 2.748 + + 55 + 1 2.304 49391.2 1.0 2132 4071 6203 SUDHL4_400M_050219_1,6205 SUDHL4_400M_050219_1,6205,LQFPVGRVHR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6207 32.449 111.0 553040.0 25 0 86484.0 + 2354 AQLPEKVEY 9 86 538.7843407448795 1075.554128556559 2 538.7843505740166 MULTI CID FTMS 0 0 0 6206 374102.0625 0.7347580526367475 -1 0.0063896179199218 1 Unmodified _AQLPEKVEY_ ENSG00000127616|ENST00000344626|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 26.268140514670165 0.1969607489560049 5 [QA]{I|L}PE 5 4 41.158 0.0 0.0 3.8267 0.0 0.0 0.0 534.2555025690061 534.2555025690061 10.29332251985565 0.0 0.0 0.0 0 1.2614393726401687 0.8538719643217619 0.3807196863200844 0.0 + [QA]{I|L}PE 3.8267 + + 339 + 1 2.304 50837.9 1.0 2133 4072 6206 SUDHL4_400M_050219_1,6207 SUDHL4_400M_050219_1,6207,AQLPEKVEY False True AQLPEKVEY 32.44896 538.784350574017 2614878.0 6206.0 ENST00000591595.5_1_19:11130023-11172489:+|nuORF;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;;ENSG00000127616|ENST00000344626|SMARCA4;;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 6.065090656280518 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6208 32.457 428.0 239580.0 25 0 30745.0 + 12579 GVIEPNKEL 9 123 499.7811179124597 997.5476828917194 2 499.7788268923759 MULTI CID FTMS 0 0 0 6206 97741.1484375 0.4928886338775166 -5 0.2734642028808594 2 Unmodified _GVIEPNKEL_ ENSG00000117475|ENST00000367808|BLZF1;nc|ENSG00000117475|Q9H2G9-2|BLZF1 42.09456458481378 0.0639583784996157 5 {[QN]|[E{I|L}]|[KN]}KQT{I|L}SS 8 8 48.184 0.0 0.0 4.8303 0.0 0.0 0.0 108.04491124548818 108.04491124548818 17.48773768811723 0.0 0.0 0.0 0 1.079689690656103 2.0 0.3494850021680094 0.7059771852360797 {[QN]|[E{I|L}]|[KN]}KQT{I|L}SS 4.8303 - 989 1 2.304 83702.1 1.0 2134 4072 6206 SUDHL4_400M_050219_1,6208 SUDHL4_400M_050219_1,6208,GVIEPNKEL True True GVIEPNKEL 32.456579 499.778826892376 1230661.0 6206.0 ENSG00000117475|ENST00000367808|BLZF1;;nc|ENSG00000117475|Q9H2G9-2|BLZF1 3.500166575113932 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6209 32.461 264.0 283760.0 25 0 44259.0 -1 VGIEFMDLY 9 71 551.7593042016281 1101.504055470056 2 551.7587768435478 MULTI CID FTMS 0 0 0 6206 157903.40625 1.0 0 0.0 3 Oxidation (M) _VGIEFM(Oxidation (M))DLY_ ENSG00000174231|ENST00000304992|PRPF8 8.593279151180031 0.6146971463335029 5 VE 2 -1 23.711 0.0 0.0 2.1526 0.0 0.0 0.0 870.3682882230936 870.3682882230936 9.107281392838829 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 VE 2.1526 - 17 + 1 2.304 64647.9 1.0 2135 4072 6206 SUDHL4_400M_050219_1,6209 SUDHL4_400M_050219_1,6209,VGIEFMDLY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6210 32.466 232.0 305620.0 25 0 27451.0 16080 ITPSSSPSPV 10 111 486.2551716596986 970.4957903861972 2 486.2552368044853 MULTI CID FTMS 0 0 0 6206 109858.328125 0.3203461812922426 -8 0.3734703063964844 4 Unmodified _ITPSSSPSPV_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 17.11289562659939 0.5604042439455784 5 {[TV]|[{I|L}S]}PTS 5 7 34.977 0.0 0.0 3.6041 0.0 0.0 0.0 482.2283344236381 482.2283344236381 13.550541008457976 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5055690986777881 0.0 {[TV]|[{I|L}S]}PTS 3.6041 - 341 1 2.304 58807.1 1.0 2136 4072 6206 SUDHL4_400M_050219_1,6210 SUDHL4_400M_050219_1,6210,ITPSSSPSPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6211 32.471 272.0 183520.0 25 0 22000.0 + 14031 IAGTQKELY 9 84 511.78034238581193 1021.546131838424 2 511.7800781130791 MULTI CID FTMS 0 0 0 6206 101764.4140625 1.0 0 0.0 5 Unmodified _IAGTQKELY_ REV__ENSG00000137992|ENST00000370132|DBT 28.486842064014134 0.1687311288560894 5 [{I|L}A]G[RN]{[ES]|[DT]|[{I|L}C]}{I|L}Y 9 -1 + 28.042 0.0 0.0 2.7451 2.7451 78.309 0.0 0.0 0.0 3.578045309373937 14.349148226915426 3.578045309373937 5.985994592184557 0 0.7614393726401688 1.0969100130080565 0.5 0.4247425010840047 [{I|L}A]G[RN]{[ES]|[DT]|[{I|L}C]}{I|L}Y;[Q{I|L}][RN]{[ES]|[DT]|[{I|L}C]}{I|L}Y 2.7451;2.1591 -;- 123 1 2.304 47262.8 1.0 2137 4072 6206 SUDHL4_400M_050219_1,6211 SUDHL4_400M_050219_1,6211,IAGTQKELY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6212 32.48 499.0 188630.0 25 0 11396.0 + 59 AADPQIRQF 9 131 523.2758834276697 1044.5372139221392 2 523.2766601443291 MULTI CID FTMS 0 0 0 6206 107626.2109375 0.630263113589191 -3 0.1290512084960937 6 Unmodified _AADPQIRQF_ ENSG00000196497|ENST00000354464|IPO4;ENST00000558193.5_1_14:24657452-24657993:-|nuORF;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000560315.5_1_14:24657420-24657993:-|nuORF;ENST00000561199.5_1_14:24652794-24657993:-|nuORF;nc|ENSG00000196497|Q8TEX9-2|IPO4 37.97399986684836 0.0865783450051559 5 AADPQ{I|L} 6 3 55.45 0.0 0.0 5.3086 0.0 0.0 0.0 446.2169477681312 446.2169477681312 28.918680100498868 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.805462187404089 + AADPQ{I|L} 5.3086 + + 319 + 1 2.304 80539.0 1.0 2138 4072 6206 SUDHL4_400M_050219_1,6212 SUDHL4_400M_050219_1,6212,AADPQIRQF True True AADPQIRQF 32.479671 523.276660144329 921918.375 6206.0 ENST00000561199.5_1_14:24652794-24657993:-|nuORF;;ENST00000558193.5_1_14:24657452-24657993:-|nuORF;;nc|ENSG00000196497|Q8TEX9-2|IPO4;;ENSG00000196497|ENST00000354464|IPO4;;ENST00000560315.5_1_14:24657420-24657993:-|nuORF;;ENST00000559588.5_1_14:24652221-24657802:-|nuORF 6.95803181330363 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6214 32.496 800.0 92020.0 25 0 6640.0 + 19589 LFYQMMCSFYF 11 104 740.3104277383163 1478.6063025434323 2 740.3099243044853 MULTI CID FTMS 0 0 0 6213 51763.2734375 0.5248574795905451 1 -0.0304412841796875 1 Unmodified _LFYQMMCSFYF_ REV__ENSG00000186113|ENST00000335605|OR5D14 5.731851221503515 0.8481046878870278 5 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 53.153 0.0 0.0 3.5948 0.0 0.0 394.1608448712906 0.0 394.1608448712906 0.0 39.17403451429223 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.3494850021680094 DEAQQNA{M(Oxidation (M))|F}Y 3.5948 - 1283 1 2.304 57021.1 0.5799999833106995 2139 4073 6213 SUDHL4_400M_050219_1,6214 SUDHL4_400M_050219_1,6214,LFYQMMCSFYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6215 32.497 39.0 1417400.0 25 0 134970.0 + 13365 HLGTPGPVSL 10 86 489.274286426868 976.534019920536 2 489.2744323611259 MULTI CID FTMS 0 0 0 6213 1301051.5 0.785875815546059 -2 0.0417633056640625 2 Unmodified _HLGTPGPVSL_ REV__ENSG00000122515|ENST00000309315|ZMIZ2;REV__nc|ENSG00000122515|Q8NF64-2|ZMIZ2;REV__nc|ENSG00000122515|Q8NF64-3|ZMIZ2 43.85829265575387 0.1168243637355526 5 [VP]HTQPVS{I|L} 9 -1 + 73.414 0.0 0.0 7.5178 7.5178 94.474 0.0 0.0 0.0 9.604093769761874 16.368413242705913 9.604093769761874 9.604093769761874 0 1.1022338482433751 1.6989700043360187 1.1549471895720984 0.3252574989159953 [VP]HTQPVS{I|L};[HT]QPVPVS{I|L};[VP]HT[AG]PVS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VTQPVS{I|L};[HT][AG]PVPVS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]VPVS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VT[AG]PVS{I|L};[HT][VP]QPVS{I|L};[VP]HVGAAVD{I|L};[VP]H{[QG]|[NA]}{I|L}VD{I|L} 7.5178;6.5344;6.2418;5.8637;5.2583;5.0721;4.5877;4.5862;4.045;3.9039 -;-;-;-;-;-;-;-;-;- 503 1 2.304 49652.1 1.0 2140 4073 6213 SUDHL4_400M_050219_1,6215 SUDHL4_400M_050219_1,6215,HLGTPGPVSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6216 32.505 455.0 200780.0 25 0 71717.0 14305 IELEEPPL 8 102 470.25723838938814 0 470.2575866580009 PEAK CID FTMS 0 0 0 6213 141560.296875 0.5442522731446431 -7 0.3726654052734375 3 Unmodified _IELEEPPL_ ENSG00000240065|ENST00000374859|PSMB9;ENST00000464863.1_1_6:32825734-32826344:+|nuORF;ENST00000467593.1_1_6:32823908-32826344:+|nuORF;nc|ENSG00000240065|P28065-2|PSMB9 10.183394434864962 0.5394990767616434 5 {I|L} 1 7 6.9897 0.0 0.0 0.74477 0.0 0.0 740.3261090035826 82.06698785953358 822.3930968631162 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.74477 + + 26 + 1 2.304 75406.1 1.0 2141 4073 6213 SUDHL4_400M_050219_1,6216 SUDHL4_400M_050219_1,6216,IELEEPPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6217 32.51 266.0 157990.0 25 0 13148.0 + 31133 RLMPENPTY 9 82 560.7773183636501 1119.5400837941002 2 560.7780029177666 MULTI CID FTMS 0 0 0 6213 102628.5703125 0.8458408818485874 -1 0.0353736877441406 4 Unmodified _RLMPENPTY_ ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1 24.020572477871973 0.2255576514309169 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[EP]N 6 5 29.939 0.0 0.0 2.6742 0.0 0.0 0.0 376.15214135887567 376.15214135887567 11.522496736287447 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.0 0.3807196863200844 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[EP]N 2.6742 - 69 1 2.304 39606.2 1.0 2142 4073 6213 SUDHL4_400M_050219_1,6217 SUDHL4_400M_050219_1,6217,RLMPENPTY False True RLMPENPTY 32.510014 560.778002917767 725509.125 6213.0 nc|ENSG00000198862|O94822-3|LTN1;;ENSG00000198862|ENST00000361371|LTN1 6.68889045715332 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6219 32.515 2.6 16849000.0 25 0 1767700.0 + 17003 KIYEGQVEV 9 76 532.7845593645503 1063.5545657959003 2 532.7855102419853 MULTI CID FTMS 0 0 0 6218 20881004.0 0.7473618821389671 3 -0.0866546630859375 1 Unmodified _KIYEGQVEV_ ENSG00000122406|ENST00000370321|RPL5;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 36.506200033944 0.094635877243972 5 {[QG]|[NA]}EY[K{I|L}]VEV 9 6 + 50.978 0.0 0.0 4.7932 4.7932 77.895 0.0 0.0 0.0 1.0871532464518552 16.478174818886373 1.0871532464518552 1.0871532464518552 0 0.3252574989159953 0.0 0.805462187404089 0.3807196863200844 {[QG]|[NA]}EY[K{I|L}]VEV;[AG]GEY[K{I|L}]VEV;{[QG]|[NA]}EYV[K{I|L}]EV;{[QG]|[NA]}EVY[K{I|L}]EV;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}Y[K{I|L}]EV;[AG]GEYV[K{I|L}]EV;[AG]GEVY[K{I|L}]EV 4.7932;4.691;4.1108;4.1108;4.0622;4.0086;4.0086 -;-;-;-;-;-;- 110 1 2.304 44694.7 1.0 2143 4074 6218 SUDHL4_400M_050219_1,6219 SUDHL4_400M_050219_1,6219,KIYEGQVEV True True KIYEGQVEV 32.51467 532.785510241985 413068944.0 6218.0 ENSG00000122406|ENST00000370321|RPL5;;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 3.963125149408976 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6220 32.518 183.0 349940.0 25 0 26127.0 -1 0 92 575.3396729257217 574.3323964591217 1 575.3407470583916 MULTI CID FTMS 0 0 0 6218 281826.46875 0.5089130994668697 3 -0.0866546630859375 2 5 [VS]SVA{I|L} 6 -1 + 60.868 0.0 0.0 10.598 10.598 86.492 0.0 0.0 0.0 19.488474775526186 29.74862134134254 19.488474775526186 0.554169578177337 0 1.0673851849885578 1.3010299956639813 1.5 0.0 [VS]SVA{I|L};[VS]SAV{I|L};[VS]ASV{I|L};[VS]SA{I|L}V;[VS]AS{I|L}V;[VS]A{I|L}SV;{[VA]|[{I|L}G]}SSV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SV{I|L};{[VA]|[{I|L}G]}SS{I|L}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}V 10.598;10.502;9.3496;9.1728;8.0209;6.4063;5.6352;5.6044;4.3065;4.2756 -;-;-;-;-;-;-;-;-;- 158 1 2.304 54822.3 1.0 2144 4074 6218 SUDHL4_400M_050219_1,6220 SUDHL4_400M_050219_1,6220, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6221 32.521 147.0 513390.0 25 0 56430.0 + 15956 ITAPPSRVL 9 75 477.2927396543278 952.5709263754557 2 477.2924682497978 MULTI CID FTMS 0 0 0 6218 298656.1875 0.0881708904809738 -9 0.4354057312011719 3 Unmodified _ITAPPSRVL_ ENSG00000099194|ENST00000370355|SCD 29.84058131909904 0.1515068451768857 5 {I|L}TAPP 5 4 58.488 0.0 0.0 6.14 0.0 0.0 0.0 470.2714327447876 470.2714327447876 34.050697163554986 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + {I|L}TAPP 6.14 + + 63 + 1 2.304 62078.3 1.0 2145 4074 6218 SUDHL4_400M_050219_1,6221 SUDHL4_400M_050219_1,6221,ITAPPSRVL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6222 32.531 549.0 263580.0 25 0 13587.0 + 31933 RVASVMQEY 9 140 541.7684142677309 1081.5222756022615 2 541.7687866091728 MULTI CID FTMS 0 0 0 6218 127957.796875 0.1486322664531309 -5 0.1948661804199218 4 Unmodified _RVASVMQEY_ ENSG00000106588|ENST00000223321|PSMA2;ENST00000411875.1_1_7:42961455-42966220:-|nuORF;ENST00000429685.1_1_2:203044345-203044546:+|nuORF;ENST00000433579.1_1_7:42952135-42964395:-|nuORF 55.50274090549119 0.0285720310785888 5 SVMQEY 6 3 58.07 0.0 0.0 5.3692 0.0 0.0 326.20738417793126 0.0 326.20738417793126 0.0 39.88203938940933 0.0 0.0 0 1.110924374808178 0.0 0.2887254899964357 0.3807196863200844 + SVMQEY 5.3692 + + 528 1 2.304 112115.2 1.0 2146 4074 6218 SUDHL4_400M_050219_1,6222 SUDHL4_400M_050219_1,6222,RVASVMQEY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6224 32.536 83.0 592290.0 25 0 32625.0 + 26229 NQIRPGLQY 9 88 544.7953204202524 1087.5760879073048 2 544.7959472537041 MULTI CID FTMS 0 0 0 6223 573406.4375 0.5555422137464393 4 -0.1371421813964843 1 Unmodified _NQIRPGLQY_ ENSG00000165209|ENST00000348403|STRBP;nc|ENSG00000165209|Q96SI9-2|STRBP 100.37149154755038 0.0107586824602606 5 GGQ{I|L}[VP]{I|L}NQY 10 5 + 65.126 0.0 0.0 5.9882 5.9882 85.78 0.0 0.0 0.0 4.685210829577443 16.53212513775344 4.685210829577443 4.685210829577443 0 1.7302046884880935 1.0457574905606752 0.0 1.079689690656103 GGQ{I|L}[VP]{I|L}NQY;{[QN]|[E{I|L}]|[KN]}{I|L}[VP]{I|L}NQY;GGQ{I|L}[VP]{I|L}N[AG]Y;GGQ{I|L}[VP]{I|L}GGQY;GG[AG]{I|L}[VP]{I|L}NQY;{[QN]|[E{I|L}]|[KN]}{I|L}[VP]{I|L}GGQY;{[QN]|[E{I|L}]|[KN]}{I|L}[VP]{I|L}N[AG]Y;[Q{I|L}][PG]R{I|L}NQY;[Q{I|L}]N[VP]{I|L}NQY;[Q{I|L}][PG][VG]{I|L}NQY 5.9882;5.5574;5.1455;5.1455;4.7955;4.7107;4.7107;3.8382;3.79;2.9915 -;-;-;-;-;-;-;-;-;- 288 1 2.304 43034.9 1.0 2147 4075 6223 SUDHL4_400M_050219_1,6224 SUDHL4_400M_050219_1,6224,NQIRPGLQY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6225 32.538 123.0 480180.0 25 0 26938.0 14454 IFTFHDTF 8 89 514.2475003871168 1026.4804478410335 2 514.2474853396416 MULTI CID FTMS 0 0 0 6223 253978.78125 0.2813817983807146 5 -0.1593475341796875 2 Unmodified _IFTFHDTF_ ENSG00000165810|ENST00000327705|BTNL9 40.44857923139169 0.2267865117615937 5 {I|L}C(Carbamidomethyl (C))ST{M(Oxidation (M))|F} 5 5 43.659 0.0 0.0 4.2532 0.0 0.0 400.1961231916032 0.0 400.1961231916032 0.0 31.18440000316717 0.0 0.0 0 1.0 0.0 0.8252574989159953 0.0 {I|L}C(Carbamidomethyl (C))ST{M(Oxidation (M))|F} 4.2532 - 214 1 2.304 51151.1 1.0 2148 4075 6223 SUDHL4_400M_050219_1,6225 SUDHL4_400M_050219_1,6225,IFTFHDTF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6226 32.547 492.0 231530.0 25 0 29210.0 26748 PAALRKLL 8 124 441.2999596871614 880.5853664411228 2 441.2997009158134 MULTI CID FTMS 0 0 0 6223 97624.1015625 0.8121216379115596 -1 0.0208549499511718 3 Unmodified _PAALRKLL_ ENSG00000130589|ENST00000467148|HELZ2;nc|ENSG00000130589|Q9BYK8-2|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2 13.50788311687929 0.7113601687236069 5 {I|L}K[R{I|L}]{I|L} 5 5 16.7 0.0 0.0 1.8964 0.0 0.0 239.1260077145436 0.0 239.1260077145436 0.0 7.491596866368013 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 {I|L}K[R{I|L}]{I|L} 1.8964 - 34 + 1 2.304 94065.0 1.0 2149 4075 6223 SUDHL4_400M_050219_1,6226 SUDHL4_400M_050219_1,6226,PAALRKLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6227 32.555 469.0 397280.0 25 0 114490.0 -1 0 107 564.3592075705616 563.3519311039615 1 564.3591186404228 MULTI CID FTMS 0 0 0 6223 252981.4375 0.7866381035966458 -1 0.0208549499511718 4 5 Y 1 -1 11.594 0.0 0.0 2.058 0.0 0.0 382.2776340842334 0.0 382.2776340842334 0.0 2.261488354973152 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.058 - 5 + 1 2.304 143330.3 1.0 2150 4075 6223 SUDHL4_400M_050219_1,6227 SUDHL4_400M_050219_1,6227, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6228 32.561 328.0 371300.0 25 0 43789.0 -1 0 156 376.2255477486193 375.21827128201926 1 377.2293273806572 MULTI CID FTMS 0 0 0 6223 104260.578125 0.9977693773149672 -1 0.0208549499511718 5 5 {I|L}{I|L}M 3 -1 + 40.662 0.0 0.0 10.837 10.837 98.328 0.0 0.0 0.0 6.735162698957282 6.735162698957282 6.735162698957282 20.026975159433533 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}{I|L}M;{I|L}M{I|L};{I|L}{M(Oxidation (M))|F}P 10.837;5.4994;3.6112 -;-;- 27 + 1 2.304 98103.4 1.0 2151 4075 6223 SUDHL4_400M_050219_1,6228 SUDHL4_400M_050219_1,6228, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6230 32.579 800.0 140960.0 25 0 9908.6 + 42018 VQQWRNWMLQ 10 116 702.8477173639604 1403.6808817947208 2 702.8476440310478 MULTI CID FTMS 0 0 0 6229 132094.1875 0.4485319514025145 -4 0.1169509887695312 1 Oxidation (M) _VQQWRNWM(Oxidation (M))LQ_ ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1 61.357469665136826 0.0330252915653943 5 {[QV]|[N{I|L}]|[RA]|[KV]}NEEN{I|L}NG{M(Oxidation (M))|F}{I|L}Q 12 6 + 109.38 0.0 0.0 7.7926 7.7926 92.608 0.0 0.0 0.0 27.803943707888763 90.57110048012925 27.803943707888763 9.03335040558744 0 2.5 2.0 0.0 1.385151878060192 {[QV]|[N{I|L}]|[RA]|[KV]}NEEN{I|L}NG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEE[{M(Oxidation (M))|F}V]ANN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}GGEEN{I|L}NG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEN{I|L}GGG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEGG{I|L}NG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEN{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}ENEN{I|L}NG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEN{[CT]|[{M(Oxidation (M))|F}G]}{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEEN{I|L}{[CT]|[{M(Oxidation (M))|F}G]}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NEE[{M(Oxidation (M))|F}V]AGGN{I|L}Q 7.7926;7.1491;7.1444;7.1444;7.1444;6.9126;6.6672;6.6148;6.5458;6.5009 -;-;-;-;-;-;-;-;-;- 5551 1 2.313 87399.0 0.5799999833106995 2152 4076 6229 SUDHL4_400M_050219_1,6230 SUDHL4_400M_050219_1,6230,VQQWRNWMLQ True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6231 32.583 211.0 405890.0 25 0 65696.0 + 41365 RLGDVVRV 8 92 457.2837645489432 912.5529761646864 2 457.2833740115166 MULTI CID FTMS 0 0 0 6229 130692.4140625 0.5059666003220425 -2 0.0511360168457031 2 Unmodified _VPKFRGPL_ nc|ENSG00000167925|Q8N2G8-2|GHDC;ENSG00000167925|ENST00000587427|GHDC;nc|ENSG00000167925|Q8N2G8-3|GHDC;ENST00000585735.1_1_17:40342468-40343067:-|nuORF 15.768221252438446 0.6779680726941459 5 V{[VA]|[{I|L}G]}W[KT]P{I|L} 8 5 + 30.002 0.0 0.0 3.2876 3.2876 85.762 0.0 0.0 0.0 4.9398488865271695 12.123118091426974 4.9398488865271695 26.56846958825732 0 0.1139829889124311 0.0 0.0 0.4247425010840047 V{[VA]|[{I|L}G]}W[KT]P{I|L};[R{I|L}][DG]V[RV]V;[R{I|L}][RD][RV]V 3.2876;0.3762;0.33651 -;-;- 187 + 1 2.313 71132.2 1.0 2153 4076 6229 SUDHL4_400M_050219_1,6231 SUDHL4_400M_050219_1,6231,VPKFRGPL False False RLGDVVRV 32.582716 457.283374011517 1056865.875 6229.0 nc|ENSG00000167925|Q8N2G8-2|GHDC;;ENSG00000167925|ENST00000587427|GHDC;;nc|ENSG00000167925|Q8N2G8-3|GHDC;;ENST00000585735.1_1_17:40342468-40343067:-|nuORF 0.8588191469510397 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6232 32.597 800.0 91175.0 25 0 6212.1 + -1 QNQYELFMEVM 11 121 732.3125939955664 1462.6106350579328 2 732.8168823122978 MULTI CID FTMS 0 0 0 6229 85632.3984375 1.0 0 0.0 3 2 Oxidation (M) _QNQYELFM(Oxidation (M))EVM(Oxidation (M))_ REV__ENSG00000152253|ENST00000282074|SPC25;REV__ENST00000479309.6_1_2:169690730-169745796:-|nuORF 2.9952420565917617 0.861016188266951 5 ANGAEA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}Y 10 -1 58.404 0.0 0.0 3.9931 0.0 0.0 327.140294601378 0.0 327.140294601378 0.0 35.44276759889934 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 ANGAEA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}Y 3.9931 - 2880 + 1 2.313 56869.8 0.5600000023841858 2154 4076 6229 SUDHL4_400M_050219_1,6232 SUDHL4_400M_050219_1,6232,QNQYELFMEVM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6234 32.603 203.0 300250.0 25 0 41885.0 + 2385 AQNGAFFS 8 88 421.1963594140405 840.3781658948809 2 421.1959716677666 MULTI CID FTMS 0 0 0 6233 163741.203125 0.9648665659640502 2 -0.0713424682617187 1 Unmodified _AQNGAFFS_ REV__ENSG00000163888|ENST00000296238|CAMK2N2 13.50788311687929 0.7113601687236069 5 {[QN]|[E{I|L}]|[KN]}AQA{M(Oxidation (M))|F}Y 7 -1 + 31.159 0.0 0.0 3.7078 3.7078 76.241 0.0 0.0 0.0 1.9728665867127688 8.20068391555391 1.9728665867127688 1.9728665867127688 0 0.7429928190999391 0.0 0.2215141619232908 0.6989700043360187 {[QN]|[E{I|L}]|[KN]}AQA{M(Oxidation (M))|F}Y;QQGQA{M(Oxidation (M))|F}Y;[QA]GGQA{M(Oxidation (M))|F}Y;[QA]NQA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[AG]A{M(Oxidation (M))|F}Y;QQG[AG]A{M(Oxidation (M))|F}Y;[QA]GG[AG]A{M(Oxidation (M))|F}Y;[QA]N[AG]A{M(Oxidation (M))|F}Y;QQANA{M(Oxidation (M))|F}Y;[QA]GANA{M(Oxidation (M))|F}Y 3.7078;3.473;3.3098;3.2347;2.5975;2.3628;2.2077;2.1244;1.962;1.7988 -;-;-;-;-;-;-;-;-;- 135 1 2.313 55397.4 1.0 2155 4077 6233 SUDHL4_400M_050219_1,6234 SUDHL4_400M_050219_1,6234,AQNGAFFS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6235 32.617 800.0 223120.0 25 0 16040.0 -1 MDNITRQNQFY 11 126 744.3312453833815 1486.647937833563 2 744.3323852419853 MULTI CID FTMS 0 0 0 6233 159494.21875 0.2608605274786967 -7 0.2173614501953125 2 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 5 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y 14 -1 + 99.343 0.0 0.0 6.6824 6.6824 89.414 0.0 0.0 0.0 7.051293028779767 11.504697682456351 7.051293028779767 7.051293028779767 0 1.1549471895720984 0.8538719643217619 0.0 2.115356566548286 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQ{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{M(Oxidation (M))|F}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}AGG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGAE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y 6.6824;6.2081;6.2013;6.0736;6.0736;6.0736;6.0494;6.0097;5.8942;5.7933 -;-;-;-;-;-;-;-;-;- 16770 1 2.313 128848.6 0.6299999952316284 2156 4077 6233 SUDHL4_400M_050219_1,6235 SUDHL4_400M_050219_1,6235,MDNITRQNQFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6236 32.62 149.0 563720.0 25 0 185310.0 -1 0 60 428.20471508613815 427.19743861953816 1 431.2201415896416 MULTI CID FTMS 0 0 0 6233 220951.734375 1.0 0 0.0 3 5 P 1 -1 10.596 0.0 0.0 2.4803 0.0 0.0 312.13323528877487 0.0 312.13323528877487 0.0 10.595932038596043 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.4803 - 3 + 1 2.313 74058.0 1.0 2157 4077 6233 SUDHL4_400M_050219_1,6236 SUDHL4_400M_050219_1,6236, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6237 32.627 410.0 225830.0 25 0 25191.0 + 15781 ISEENFRVM 9 114 570.7711567749167 1139.5277606166333 2 570.7709228396416 MULTI CID FTMS 0 0 0 6233 139150.53125 0.4678897588351052 -6 0.1588592529296875 4 Oxidation (M) _ISEENFRVM(Oxidation (M))_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 60.07390631473393 0.0260411565414776 5 {I|L}SEEN{M(Oxidation (M))|F}RV{M(Oxidation (M))|F} 9 0 + 90.461 0.0 0.0 7.9384 7.9384 94.051 0.0 0.0 0.0 74.79364375124895 6.082268588648248 6.082268588648248 9.208187539523747 0 0.8807196863200843 2.0 0.6861818737241735 0.0 + + {I|L}SEEN{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};{I|L}SEEGG{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};{[TV]|[{I|L}S]}V[HM]YYD{I|L};[YT]R{M(Oxidation (M))|F}YYD{I|L};{[TV]|[{I|L}S]}V[HM]N{[HG]|PP}V{M(Oxidation (M))|F};{[TV]|[{I|L}S]}V[HM]N[DP]D{I|L};{[TV]|[{I|L}S]}V[HM]N[HC]S{I|L};[YT]R{M(Oxidation (M))|F}N[DP]D{I|L};HH[PS]N{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};[YT]R{M(Oxidation (M))|F}N[PS]QQ 7.9384;7.1304;3.6663;3.3598;3.0173;2.9703;2.8157;2.6591;2.2203;1.9606 +;-;-;-;-;-;-;-;-;- + 834 + 1 2.313 73528.4 1.0 2158 4077 6233 SUDHL4_400M_050219_1,6237 SUDHL4_400M_050219_1,6237,ISEENFRVM True False ISEENFRVM 32.627093 570.770922839642 4134479.25 6233.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 8.235101064046225 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6238 32.633 296.0 230360.0 25 0 19161.0 + + -1 TVHGVTQAF 9 98 480.2532356762762 958.4919184193524 2 480.2529479861259 MULTI CID FTMS 0 0 0 6233 89314.5078125 1.0 0 0.0 5 Oxidation (M) _SLHQM(Oxidation (M))TVK_ ENST00000600997.5_1_19:18699887-18701744:+|nuORF;nc|ENSG00000006015|Q96EN9-3|REX1BD;nc|ENSG00000006015|Q96EN9-2|REX1BD;ENST00000597371.1_1_19:18699887-18702987:+|nuORF;ENSG00000006015|ENST00000358607|REX1BD;ENST00000598375.5_1_19:18699887-18701110:+|nuORF 11.640296217721598 0.738950129755968 5 A{M(Oxidation (M))|F} 2 -1 19.464 0.0 0.0 2.0307 0.0 0.0 722.3757512824368 0.0 722.3757512824368 0.0 0.0100806973295384 0.0 0.0 0 0.0 0.0 0.0 0.0 A{M(Oxidation (M))|F} 2.0307 - 201 + 1 2.313 55984.2 1.0 2159 4077 6233 SUDHL4_400M_050219_1,6238 SUDHL4_400M_050219_1,6238,SLHQMTVK False False TVHGVTQAF 32.632507 480.252947986126 555188.375 6233.0 ENST00000600997.5_1_19:18699887-18701744:+|nuORF;;nc|ENSG00000006015|Q96EN9-3|REX1BD;;nc|ENSG00000006015|Q96EN9-2|REX1BD;;ENST00000597371.1_1_19:18699887-18702987:+|nuORF;;ENSG00000006015|ENST00000358607|REX1BD;;ENST00000598375.5_1_19:18699887-18701110:+|nuORF 1.3695432543754578 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6240 32.639 139.0 616000.0 25 0 131560.0 -1 0 96 376.2255477486193 375.21827128201926 1 376.2258483767509 MULTI CID FTMS 0 0 0 6239 385300.46875 0.7886686460970174 1 -0.0353584289550781 1 5 {I|L}{I|L}M 3 -1 + 54.425 0.0 0.0 14.505 14.505 98.777 0.0 0.0 0.0 12.730012720637376 12.730012720637376 12.730012720637376 23.837838934050986 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}M;{I|L}M{I|L} 14.505;8.1518 -;- 15 + 1 2.325 73421.1 1.0 2160 4078 6239 SUDHL4_400M_050219_1,6240 SUDHL4_400M_050219_1,6240, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6241 32.653 800.0 72942.0 25 0 19908.0 -1 0 35 1188.816722280062 3563.4283374403867 3 1189.477465808392 MULTI CID FTMS 0 0 0 6239 157112.1875 0.4365165259029175 -8 0.2533454895019531 2 5 G 1 -1 6.9897 0.0 0.0 0.19615 0.0 0.0 2146.771735972556 1356.621251447256 3503.392987419812 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19615 - 2 + 1 2.325 56408.6 0.449999988079071 2161 4078 6239 SUDHL4_400M_050219_1,6241 SUDHL4_400M_050219_1,6241, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6242 32.659 303.0 302980.0 25 0 23181.0 + 6390 DWAKLIKRL 9 105 381.5740243685373 1141.700243705812 3 381.5741454958916 MULTI CID FTMS 0 0 0 6239 131853.203125 0.3729661037100262 -2 0.071502685546875 3 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 11.494710602746466 0.5255349189887087 5 K{I|L}K[QP]E 6 -1 20.635 0.0 0.0 1.8074 0.0 0.0 400.2807789533219 0.0 400.2807789533219 0.0 8.852125957641999 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 1.8074 - 45 1 2.325 75591.5 1.0 2162 4078 6239 SUDHL4_400M_050219_1,6242 SUDHL4_400M_050219_1,6242,DWAKLIKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6243 32.668 528.0 179610.0 25 0 14378.0 + 40848 VLNSNVLI 8 141 436.26608263575406 870.5176123383081 2 436.2662231326103 MULTI CID FTMS 0 0 0 6239 104921.328125 1.0 0 0.0 4 Unmodified _VLNSNVLI_ REV__ENSG00000080224|ENST00000389672|EPHA6;REV__ENSG00000116106|ENST00000281821|EPHA4;REV__ENSG00000133216|ENST00000374630|EPHB2;REV__ENSG00000135333|ENST00000369303|EPHA7;REV__ENSG00000142627|ENST00000358432|EPHA2;REV__ENSG00000154928|ENST00000398015|EPHB1;REV__ENSG00000182580|ENST00000330394|EPHB3;REV__ENSG00000196411|ENST00000358173|EPHB4;REV__ENST00000487222.5_1_7:100401085-100421908:-|nuORF;REV__ENST00000492403.1_1_7:100403981-100405169:-|nuORF;REV__nc|ENSG00000080224|Q9UF33-2|EPHA6;REV__nc|ENSG00000080224|Q9UF33-3|EPHA6;REV__nc|ENSG00000080224|Q9UF33|EPHA6;REV__nc|ENSG00000116106|P54764-2|EPHA4;REV__nc|ENSG00000133216|P29323-3|EPHB2;REV__nc|ENSG00000133216|P29323|EPHB2;REV__nc|ENSG00000135333|Q15375-2|EPHA7;REV__nc|ENSG00000135333|Q15375-4|EPHA7;REV__nc|ENSG00000154928|P54762-5|EPHB1 28.486842064014134 0.4448922141344407 5 V{I|L} 2 -1 46.579 0.0 0.0 5.3508 0.0 0.0 0.0 655.3404635065061 655.3404635065061 22.30955677600696 0.0 0.0 0.0 0 0.5610312860818771 2.0 0.0 0.0 V{I|L} 5.3508 + + 115 + 1 2.325 78433.2 1.0 2163 4078 6239 SUDHL4_400M_050219_1,6243 SUDHL4_400M_050219_1,6243,VLNSNVLI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6245 32.684 800.0 81279.0 25 0 6564.5 -1 LDCRNVDRNVL 11 113 687.3493039599375 1372.684054986675 2 687.3494140505791 MULTI CID FTMS 0 0 0 6244 79631.6171875 0.1325074604653059 6 -0.1154708862304687 1 Carbamidomethyl (C) _LDC(Carbamidomethyl (C))RNVDRNVL_ ENST00000289968.10_1_16:24930781-24931099:-|nuORF;ENST00000537417.1_16:24930737-24931099:-|nuORF 10.799506525563784 0.8105043987015127 5 {[TV]|[{I|L}S]}KDD[PS]Q{[SA]|[TG]}NV{I|L} 13 -1 + 55.94 0.0 0.0 4.0752 4.0752 76.712 0.0 0.0 0.0 12.460211124226277 16.642078980768062 12.460211124226277 1.7609125905568137 0 0.6171302707394362 1.6989700043360187 0.805462187404089 0.0 {[TV]|[{I|L}S]}KDD[PS]Q{[SA]|[TG]}NV{I|L};{[TV]|[{I|L}S]}KDDQ[PS]{[SA]|[TG]}NV{I|L};{[TV]|[{I|L}S]}KDD[PS]Q[NG]TV{I|L};{[TV]|[{I|L}S]}KDD[PS]{[CP]|[EA]}VTV{I|L};{[TV]|[{I|L}S]}KDDQ[PS][NG]TV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}ST[PS]Q{[SA]|[TG]}NV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}STQ[PS]{[SA]|[TG]}NV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}SNAWNVTV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}WWQ{[SA]|[TG]}NV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}SREQ{[SA]|[TG]}NV{I|L} 4.0752;3.9469;3.4182;3.4182;3.2899;3.1675;3.0392;2.9873;2.9606;2.8834 -;-;-;-;-;-;-;-;-;- 4285 1 2.325 54677.6 0.6800000071525574 2164 4079 6244 SUDHL4_400M_050219_1,6245 SUDHL4_400M_050219_1,6245,LDCRNVDRNVL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6246 32.686 71.0 720170.0 25 0 43467.0 + 29239 QGVVTTLENV 10 90 530.2876191313649 1058.5606853295296 2 530.2883178591728 MULTI CID FTMS 0 0 0 6244 616333.3125 0.4240318116748299 -5 0.1579971313476562 2 Unmodified _QGVVTTLENV_ ENSG00000115414|ENST00000354785|FN1;ENST00000492816.6_1_2:216226280-216244056:-|nuORF;nc|ENSG00000115414|P02751-1|FN1;nc|ENSG00000115414|P02751-10|FN1;nc|ENSG00000115414|P02751-11|FN1;nc|ENSG00000115414|P02751-12|FN1;nc|ENSG00000115414|P02751-13|FN1;nc|ENSG00000115414|P02751-14|FN1;nc|ENSG00000115414|P02751-17|FN1;nc|ENSG00000115414|P02751-3|FN1;nc|ENSG00000115414|P02751-4|FN1;nc|ENSG00000115414|P02751-5|FN1;nc|ENSG00000115414|P02751-6|FN1;nc|ENSG00000115414|P02751-7|FN1;nc|ENSG00000115414|P02751-8|FN1;nc|ENSG00000115414|P02751-9|FN1 31.26834338654808 0.266153677697784 5 DE{I|L}KQDPV 8 9 57.201 0.0 0.0 5.4037 0.0 0.0 116.09677038987964 0.0 116.09677038987964 0.0 22.301602795783573 0.0 0.0 0 0.4247425010840047 0.0 2.4604093769761874 0.0 DE{I|L}KQDPV 5.4037 - 561 + 1 2.325 48975.0 1.0 2165 4079 6244 SUDHL4_400M_050219_1,6246 SUDHL4_400M_050219_1,6246,QGVVTTLENV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6247 32.69 236.0 762960.0 25 0 133180.0 + 42167 VSDFGGRSL 9 156 469.2406234740638 936.4666940149276 2 469.2412292361259 MULTI CID FTMS 0 0 0 6244 177846.46875 0.0901731069023154 -9 0.2887039184570312 3 Unmodified _VSDFGGRSL_ ENSG00000132383|ENST00000254719|RPA1 26.268140514670165 0.1969607489560049 5 VSD{M(Oxidation (M))|F} 4 5 53.774 0.0 0.0 5.7423 0.0 0.0 0.0 485.2479149790901 485.2479149790901 39.095019080956064 0.0 0.0 0.0 0 0.8737125054200235 1.6989700043360187 0.0 0.0 + VSD{M(Oxidation (M))|F} 5.7423 + + 315 + 1 2.325 142541.6 1.0 2166 4079 6244 SUDHL4_400M_050219_1,6247 SUDHL4_400M_050219_1,6247,VSDFGGRSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6250 32.699 106.0 300150.0 25 0 18636.0 + 12252 GQYPTQPTY 9 72 527.746145281277 0 527.7459594607353 PEAK CID FTMS 0 0 0 6249 342869.9375 0.4810971035088773 1 -0.0248985290527343 1 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 21.74664581756881 0.185237546287679 5 {M(Oxidation (M))|F}PT 3 7 13.02 0.0 0.0 1.236 0.0 0.0 527.2395306975164 178.05120264224846 705.2907333397649 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 {M(Oxidation (M))|F}PT 1.236 - 26 + 1 2.325 32363.9 1.0 2167 4081 6249 SUDHL4_400M_050219_1,6250 SUDHL4_400M_050219_1,6250,GQYPTQPTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6251 32.706 369.0 134120.0 25 0 11271.0 8642 EVEEDEYKAFY 11 97 711.3075065171407 1420.6004601010814 2 711.3078491091728 MULTI CID FTMS 0 0 0 6249 253130.6875 0.367061776377758 1 -0.0248985290527343 2 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 8.155526934196011 0.8366696279279818 5 QAQQGGA{M(Oxidation (M))|F}Y 9 8 50.539 0.0 0.0 3.5576 0.0 0.0 452.1647511212906 0.0 452.1647511212906 0.0 33.99674684468792 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.4247425010840047 QAQQGGA{M(Oxidation (M))|F}Y 3.5576 - 1182 1 2.325 42387.8 1.0 2168 4081 6249 SUDHL4_400M_050219_1,6251 SUDHL4_400M_050219_1,6251,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6252 32.709 186.0 223630.0 25 0 33320.0 + 37570 TLIKELFDI 9 69 546.3188853969896 1090.623217860779 2 546.3188354372978 MULTI CID FTMS 0 0 0 6249 221072.859375 0.3703497992540581 1 -0.0248985290527343 3 Unmodified _TLIKELFDI_ REV__ENSG00000141639|ENST00000400384|MAPK4 10.823927491677226 0.5436922275383211 5 Y 1 -1 12.474 0.0 0.0 1.1438 0.0 0.0 909.5488750646838 0.0 909.5488750646838 0.0 2.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1438 - 21 + 1 2.325 36715.5 1.0 2169 4081 6249 SUDHL4_400M_050219_1,6252 SUDHL4_400M_050219_1,6252,TLIKELFDI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6253 32.713 200.0 217190.0 25 0 20124.0 -1 0 77 439.09998041397336 2628.55622368424 6 439.2674133181572 MULTI CID FTMS 0 0 0 6249 134090.109375 0.3567498598444641 1 -0.0248985290527343 4 5 C(Carbamidomethyl (C)) 1 -1 10.969 0.0 0.0 0.41731 0.0 0.0 2450.514824613731 0.0 2450.514824613731 0.0 1.2763625255165305 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.41731 - 28 + 1 2.325 39087.1 1.0 2170 4081 6249 SUDHL4_400M_050219_1,6253 SUDHL4_400M_050219_1,6253, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6254 32.715 83.0 198090.0 25 0 12517.0 + -1 VGRLQQQC 8 52 494.7522373093249 987.48992168545 2 494.7514221072197 MULTI CID FTMS 0 0 0 6249 152342.46875 0.4391287648064205 1 -0.0248985290527343 5 Carbamidomethyl (C) _VGRLQQQC(Carbamidomethyl (C))_ REV__ENST00000402697.5_2_22:22899308-22901596:-|nuORF 2.889219685676258 0.8067950007271085 5 C(Carbamidomethyl (C)) 1 -1 11.42 0.0 0.0 1.1565 0.0 0.0 809.4487362379874 0.0 809.4487362379874 0.0 11.419983281826005 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 1.1565 + + 9 + 1 2.325 20883.2 1.0 2171 4081 6249 SUDHL4_400M_050219_1,6254 SUDHL4_400M_050219_1,6254,VGRLQQQC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6255 32.719 221.0 210900.0 25 0 36143.0 -1 SKKEMLPP 8 75 473.2587402773858 0 473.2586547732353 PEAK CID FTMS 0 0 0 6249 146378.25 0.4322035821905813 1 -0.0248985290527343 6 Oxidation (M) _SKKEM(Oxidation (M))LPP_ ENSG00000172493|ENST00000395146|AFF1;nc|ENSG00000172493|P51825-3|AFF1;nc|ENSG00000172493|P51825|AFF1 9.347437153973935 0.5488964601725408 5 G 1 -1 2.4743 0.0 0.0 0.26196 0.0 0.0 816.4076192493045 68.05124078922108 884.4588600385256 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.26196 - 9 + 1 2.325 43287.9 1.0 2172 4081 6249 SUDHL4_400M_050219_1,6255 SUDHL4_400M_050219_1,6255,SKKEMLPP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6257 32.726 135.0 341800.0 25 0 27550.0 + 38674 TTLEQPPSV 9 86 486.2551716596986 970.4957903861972 2 486.2556945681572 MULTI CID FTMS 0 0 0 6256 272762.28125 0.7953730653863268 2 -0.0559196472167968 1 Unmodified _TTLEQPPSV_ chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1;ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1 46.020951573049366 0.0490941689151868 5 [{I|L}T]SPSS 6 5 52.184 0.0 0.0 5.3771 0.0 0.0 0.0 395.1926037009035 395.1926037009035 34.35795955899095 0.0 0.0 0.0 0 0.0 2.0 1.1549471895720984 0.0 [{I|L}T]SPSS 5.3771 - 212 1 2.338 40584.5 1.0 2173 4082 6256 SUDHL4_400M_050219_1,6257 SUDHL4_400M_050219_1,6257,TTLEQPPSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6258 32.73 200.0 286160.0 25 0 20632.0 + 1963 AMRPGLEGY 9 87 497.2450971643455 992.475641395491 2 497.2447692751884 MULTI CID FTMS 0 0 0 6256 183648.03125 0.1328456351892437 -8 0.2093353271484375 2 Unmodified _AMRPGLEGY_ ENSG00000100297|ENST00000216122|MCM5 32.78568957990786 0.1150597335874693 5 [PG]{I|L}ETKEGY 9 6 + 62.305 0.0 0.0 6.2777 6.2777 91.869 0.0 0.0 0.0 10.279226817289064 16.478174818886373 10.279226817289064 10.279226817289064 0 1.0 1.0969100130080565 0.2742275032520141 0.0 [PG]{I|L}ETKEGY;{[QN]|[E{I|L}]|[KN]}[PG]TKEGY;{[QN]|[E{I|L}]|[KN]}[PG]TKWY;{[DS]|[MA]|[CV]|TT}[VG]HT[KS]Y;[PG]{I|L}[MN]{I|L}WY;[{I|L}T][SG][PG]{I|L}EGY;{[DS]|[MA]|[CV]|TT}R{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VP]Y;{[QN]|[E{I|L}]|[KN]}[PG]T[WQ]Y;{[QN]|[E{I|L}]|[KN]}[PG]THR[PS];[HT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[Q{I|L}]GY 6.2777;5.242;4.0855;3.707;2.858;2.8569;2.6005;2.4995;2.1908;1.5753 -;-;-;-;-;-;-;-;-;- 175 1 2.338 50013.4 1.0 2174 4082 6256 SUDHL4_400M_050219_1,6258 SUDHL4_400M_050219_1,6258,AMRPGLEGY True True AMRPGLEGY 32.72964 497.244769275188 35780628.0 6256.0 ENSG00000100297|ENST00000216122|MCM5 7.510164101918538 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6259 32.734 246.0 250600.0 25 0 17304.0 + 10711 RLMGEGTSSL 10 101 525.7657818470998 1049.5170107609997 2 525.7661010622978 MULTI CID FTMS 0 0 0 6256 197764.09375 0.2532511926328684 -6 0.1581993103027343 3 Unmodified _FWGVPASSSL_ ENST00000567449.5_1_15:30918407-30918461:+|nuORF 61.357469665136826 0.0330252915653943 5 {[TV]|[{I|L}S]}S{I|L}GEGTSS{I|L} 11 8 + 88.511 0.0 0.0 8.4335 8.4335 95.917 0.0 0.0 0.0 10.45834787757721 15.070623213458036 10.45834787757721 10.45834787757721 0 1.3494850021680094 1.3979400086720375 1.924742501084005 0.0 {[TV]|[{I|L}S]}S{I|L}GEGTSS{I|L};{[CA]|SS}{I|L}{I|L}GEGTSS{I|L};{[WT]|[RM]}{I|L}GEGTSS{I|L};{[TV]|[{I|L}S]}S{I|L}{[WN]|[YH]}MS{I|L};{[TV]|[{I|L}S]}S{I|L}[C(Carbamidomethyl (C))R]DS{I|L};{[TV]|[{I|L}S]}S{I|L}G{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DS{I|L};{[CA]|SS}{I|L}{I|L}{[WN]|[YH]}MS{I|L};{[WT]|[RM]}{I|L}{[WN]|[YH]}MS{I|L};{[CA]|SS}{I|L}{I|L}[C(Carbamidomethyl (C))R]DS{I|L};{[WT]|[RM]}{I|L}[C(Carbamidomethyl (C))R]DS{I|L} 8.4335;7.437;7.2802;5.4399;5.226;5.0432;4.4435;4.2959;4.2295;4.082 -;-;-;-;-;-;-;-;-;- 695 1 2.338 52905.7 1.0 2175 4082 6256 SUDHL4_400M_050219_1,6259 SUDHL4_400M_050219_1,6259,FWGVPASSSL True False RLMGEGTSSL 32.734236 525.766101062298 8268805.5 6256.0 ENST00000567449.5_1_15:30918407-30918461:+|nuORF 7.705005486806233 2.0 False 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6260 32.748 800.0 153960.0 25 0 10940.0 + 18455 KYFDEHYEY 9 144 647.2750113932912 1292.5354698533822 2 647.2756225466728 MULTI CID FTMS 0 0 0 6256 104865.734375 0.5885567168612282 -4 0.0866966247558593 4 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 65.47368725323818 0.0230515101691092 5 [YE]HAYRYEY 9 5 + 64.567 0.0 0.0 4.9953 4.9953 83.14 0.0 0.0 0.0 7.684713732044074 7.684713732044074 7.684713732044074 4.948500216800937 0 0.5994850021680094 1.5228787452803376 0.3054621874040891 0.4247425010840047 [YE]HAYRYEY;[YE]H{[{M(Oxidation (M))|F}D]|MM}KYEY;KY{M(Oxidation (M))|F}DEHYEY;[YE]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NRYEY;[YE]H{[{M(Oxidation (M))|F}D]|MM}YEKY;[YE]H[Y{M(Oxidation (M))|F}]DEKY;[YE]HAY[VG]YEY;[YE]H{[{M(Oxidation (M))|F}D]|MM}EYKY;{[YC]|[HE]}D{M(Oxidation (M))|F}YKYEY;[YE]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GGRYEY 4.9953;4.6125;4.4008;4.3796;3.9904;3.9809;3.9543;3.7575;3.7469;3.6672 -;-;+;-;-;-;-;-;-;- + 2727 1 2.338 98881.3 0.6200000047683716 2176 4082 6256 SUDHL4_400M_050219_1,6260 SUDHL4_400M_050219_1,6260,KYFDEHYEY True True KYFDEHYEY 32.748071 647.275622546673 948390.75 6256.0 ENSG00000123975|ENST00000314355|CKS2 7.1638515790303545 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6261 32.762 800.0 72040.0 25 0 5938.4 -1 AVYRCWEEKPS 11 118 712.836658565991 1423.658764198782 2 712.8379394412041 MULTI CID FTMS 0 0 0 6256 79480.8671875 0.8835256958050217 -1 0.0248985290527343 5 Carbamidomethyl (C) _AVYRC(Carbamidomethyl (C))WEEKPS_ ENSG00000156886|ENST00000389202|ITGAD 11.494710602746466 0.7960433852372589 5 {[VA]|[{I|L}G]}NE[W{I|L}]TNY[WE] 11 -1 + 43.024 0.0 0.0 3.0221 3.0221 74.762 0.0 0.0 0.0 1.829306835859868 7.367585652254178 1.829306835859868 1.829306835859868 0 0.3494850021680094 1.154901959985743 0.4247425010840047 0.8494850021680094 {[VA]|[{I|L}G]}NE[W{I|L}]TNY[WE];[DV]{I|L}T{[{M(Oxidation (M))|F}H]|[RQ]}TNY[WE];[DV][KS][WP]TNY[WE];{[VA]|[{I|L}G]}NE[W{I|L}]TGGY[WE];{[VA]|[{I|L}G]}GGE[W{I|L}]TNY[WE];[DV]{I|L}T[WQ]ANY[WE];{[VA]|[{I|L}G]}NEV{[ET]|[MV]}ANY[WE];[DV]{I|L}T{[{M(Oxidation (M))|F}H]|[RQ]}TGGY[WE];{[ES]|[DT]|[{I|L}C]}[{I|L}V]{[{M(Oxidation (M))|F}H]|[RQ]}TNY[WE];[VS]{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}H]|[RQ]}TNY[WE] 3.0221;2.8936;2.5053;2.3809;2.3809;2.3188;2.3181;2.2524;2.2454;2.2335 -;-;-;-;-;-;-;-;-;- 945 1 2.338 46425.5 0.5699999928474426 2177 4082 6256 SUDHL4_400M_050219_1,6261 SUDHL4_400M_050219_1,6261,AVYRCWEEKPS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6263 32.767 107.0 420190.0 25 0 30708.0 + 13366 HLGTPGPVSL 10 78 489.274286426868 976.534019920536 2 489.2744018435478 MULTI CID FTMS 0 0 0 6262 258892.75 0.1563793216834322 8 -0.2500228881835937 1 Unmodified _HLGTPGPVSL_ REV__ENSG00000122515|ENST00000309315|ZMIZ2;REV__nc|ENSG00000122515|Q8NF64-2|ZMIZ2;REV__nc|ENSG00000122515|Q8NF64-3|ZMIZ2 20.453626601364224 0.5043500229302764 5 S{I|L} 2 -1 28.104 0.0 0.0 2.8779 0.0 0.0 758.4072174076438 0.0 758.4072174076438 0.0 13.209230142951094 0.0 0.0 0 0.4247425010840047 0.0 0.2887254899964357 0.0 S{I|L} 2.8779 + + 121 + 1 2.338 39814.6 1.0 2178 4083 6262 SUDHL4_400M_050219_1,6263 SUDHL4_400M_050219_1,6263,HLGTPGPVSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6264 32.771 206.0 384190.0 25 0 81098.0 + 35904 SVMYKLATT 9 101 507.2705057552719 1012.5264585773438 2 507.2705566287041 MULTI CID FTMS 0 0 0 6262 316151.0 0.092835263369858 -7 0.2008857727050781 2 Unmodified _SVMYKLATT_ REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8;REV__nc|ENSG00000189195|Q5XKL5|BTBD8 14.838274106304384 0.4350285940865338 5 [VS]YMATT{I|L}K 9 -1 + 76.582 0.0 0.0 7.5634 7.5634 95.767 0.0 0.0 0.0 50.61726762060174 12.196800882036584 12.196800882036584 15.42796583575644 0 0.8494850021680094 2.0 0.6549471895720985 0.1694451763165201 [VS]YMATT{I|L}K;[VS]Y[VG]{M(Oxidation (M))|F}T{I|L}K;[VS]YMS[K{I|L}][VS];[VS]{[{M(Oxidation (M))|F}D]|MM}{I|L}[HK][PA];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ATT[K{I|L}][VS];[VS][HK]{[DS]|[MA]|[CV]|TT}M[{I|L}P] 7.5634;6.0397;3.0037;1.8852;1.8844;1.4404 -;-;-;-;-;- 229 + 1 2.338 62951.5 1.0 2179 4083 6262 SUDHL4_400M_050219_1,6264 SUDHL4_400M_050219_1,6264,SVMYKLATT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6265 32.775 216.0 257010.0 25 0 14489.0 + 24660 MLSQDAPTV 9 116 481.23623457261175 960.4579162120236 2 481.2369262576103 MULTI CID FTMS 0 0 0 6262 129080.203125 0.7096246523122817 -3 0.0718193054199218 3 Unmodified _MLSQDAPTV_ ENSG00000104320|ENST00000265433|NBN 28.486842064014134 0.1687311288560894 5 PTV 3 6 21.291 0.0 0.0 2.2168 0.0 0.0 645.2778452665142 0.0 645.2778452665142 0.0 1.52469907531367 0.0 0.0 0 0.0 0.0 0.7134679910804405 0.0 + PTV 2.2168 + + 127 + 1 2.338 48200.5 1.0 2180 4083 6262 SUDHL4_400M_050219_1,6265 SUDHL4_400M_050219_1,6265,MLSQDAPTV False True MLSQDAPTV 32.775135 481.23692625761 787269.9375 6262.0 ENSG00000104320|ENST00000265433|NBN 4.079948504765828 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6267 32.78 18.0 3665300.0 25 0 491620.0 + 15957 ITAPPSRVL 9 56 477.2927396543278 952.5709263754557 2 477.2926818728447 MULTI CID FTMS 0 0 0 6266 3383102.5 0.9987777668708396 1 -0.0082130432128906 1 Unmodified _ITAPPSRVL_ ENSG00000099194|ENST00000370355|SCD 16.149105407346934 0.3995459350917656 5 {I|L}TAP 4 5 52.735 0.0 0.0 5.5361 0.0 0.0 0.0 567.3259689382307 567.3259689382307 32.27752226111541 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}TAP 5.5361 + + 30 + 1 2.338 56120.1 1.0 2181 4084 6266 SUDHL4_400M_050219_1,6267 SUDHL4_400M_050219_1,6267,ITAPPSRVL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6268 32.781 52.0 806390.0 25 0 81513.0 + 17004 KIYEGQVEV 9 70 532.7845593645503 1063.5545657959003 2 532.7850219607353 MULTI CID FTMS 0 0 0 6266 1048312.5 0.0375206481005322 13 -0.3836135864257812 2 Unmodified _KIYEGQVEV_ ENSG00000122406|ENST00000370321|RPL5;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 32.78568957990786 0.1150597335874693 5 {[QG]|[NA]}EY[K{I|L}]VEV 9 6 + 45.965 0.0 0.0 4.3218 4.3218 86.149 0.0 0.0 0.0 4.762036441594191 28.97485613133917 4.762036441594191 10.268024924119665 0 0.3807196863200844 0.0 0.3807196863200844 0.4247425010840047 {[QG]|[NA]}EY[K{I|L}]VEV;{[QG]|[NA]}EYV[K{I|L}]EV;[YE]{[QG]|[NA]}[K{I|L}]VEV;[YE][K{I|L}]{[QG]|[NA]}VEV;[YE]{[QG]|[NA]}V[K{I|L}]EV 4.3218;3.3563;3.2904;3.0074;2.325 -;-;-;-;- 77 1 2.338 41735.6 1.0 2182 4084 6266 SUDHL4_400M_050219_1,6268 SUDHL4_400M_050219_1,6268,KIYEGQVEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6269 32.783 94.0 540000.0 25 0 39189.0 + -1 RVASVMQEY 9 69 541.7684142677309 1081.5222756022615 2 541.7687866091728 MULTI CID FTMS 0 0 0 6266 477129.90625 0.5542210095081974 5 -0.1361579895019531 3 Oxidation (M) _YIQHVM(Oxidation (M))LY_ ENST00000433579.1_1_7:42952135-42964395:-|nuORF;ENST00000429685.1_1_2:203044345-203044546:+|nuORF;ENSG00000106588|ENST00000223321|PSMA2;ENST00000411875.1_1_7:42961455-42966220:-|nuORF 14.581692164780916 0.6954967302934248 5 SVMQEY 6 -1 47.652 0.0 0.0 4.406 0.0 0.0 326.20637709785314 0.0 326.20637709785314 0.0 27.2062251842808 0.0 0.0 0 0.5 0.0 0.0 0.0 SVMQEY 4.406 - 107 1 2.338 47023.7 1.0 2183 4084 6266 SUDHL4_400M_050219_1,6269 SUDHL4_400M_050219_1,6269,YIQHVMLY False False RVASVMQEY 32.783354 541.768786609173 9584240.0 6266.0 ENST00000433579.1_1_7:42952135-42964395:-|nuORF;;ENST00000429685.1_1_2:203044345-203044546:+|nuORF;;ENSG00000106588|ENST00000223321|PSMA2;;ENST00000411875.1_1_7:42961455-42966220:-|nuORF 7.256640116373698 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6271 32.788 74.0 718060.0 25 0 73797.0 + -1 ILIAAQTMK 9 71 502.7944181876215 0 502.7942993044853 PEAK CID FTMS 0 0 0 6270 404266.0625 0.8974503875893703 -4 0.0890312194824218 1 Oxidation (M) _ILIAAQTM(Oxidation (M))K_ REV__ENSG00000108509|ENST00000348066|CAMTA2;REV__ENSG00000171735|ENST00000303635|CAMTA1;REV__ENST00000574442.1_1_17:4872053-4872704:-|nuORF;REV__ENST00000574951.5_1_17:4872053-4885503:-|nuORF;REV__nc|ENSG00000108509|O94983-2|CAMTA2;REV__nc|ENSG00000108509|O94983-3|CAMTA2;REV__nc|ENSG00000108509|O94983-4|CAMTA2;REV__nc|ENSG00000108509|O94983-5|CAMTA2;REV__nc|ENSG00000108509|O94983-6|CAMTA2;REV__nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1 16.149105407346934 0.2417352846137613 5 T 1 -1 18.979 0.0 0.0 1.8912 0.0 0.0 293.1442891254134 606.3600557916624 899.5043449170757 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 T 1.8912 + + 29 + 1 2.338 47856.2 1.0 2184 4085 6270 SUDHL4_400M_050219_1,6271 SUDHL4_400M_050219_1,6271,ILIAAQTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6272 32.802 800.0 116770.0 25 0 10898.0 -1 0 71 849.6123624287021 4243.02542981051 5 850.0120117068291 MULTI CID FTMS 0 0 0 6270 47149.53125 0.6180759307357268 -3 0.0641326904296875 2 5 SN 2 -1 10.969 0.0 0.0 0.25852 0.0 0.0 1435.679513742359 2603.249441987004 4038.9289557293614 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SN 0.25852 - 37 + 1 2.338 67510.5 0.4699999988079071 2185 4085 6270 SUDHL4_400M_050219_1,6272 SUDHL4_400M_050219_1,6272, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6273 32.81 449.0 155080.0 25 0 9760.7 + 40175 VGPHGTAG 8 116 695.3471615383551 694.339885071755 1 695.3475219607353 MULTI CID FTMS 0 0 0 6270 112024.0859375 0.8835676108011649 -1 0.0082130432128906 3 Unmodified _VGPHGTAG_ REV__ENSG00000119782|ENST00000380986|FKBP1B 2.889219685676258 0.8067950007271085 5 TM{I|L}Q 4 -1 33.005 0.0 0.0 4.7534 0.0 0.0 203.1155026028081 0.0 203.1155026028081 0.0 19.49266388034832 0.0 0.0 0 0.0 0.0 0.0 0.6462566630072955 TM{I|L}Q 4.7534 - 68 + 1 2.338 55095.3 1.0 2186 4085 6270 SUDHL4_400M_050219_1,6273 SUDHL4_400M_050219_1,6273,VGPHGTAG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6276 32.83 800.0 75221.0 25 0 4302.9 -1 VQQWRNWMLQ 10 94 702.8477173639604 1403.6808817947208 2 703.3477050662041 MULTI CID FTMS 0 0 0 6275 68373.4296875 0.2669220804467704 8 -0.3121795654296875 1 Oxidation (M) _VQQWRNWM(Oxidation (M))LQ_ ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1 29.081581746732265 0.3152867722954398 5 {[QV]|[N{I|L}]|[RA]|[KV]}N 3 -1 38.301 0.0 0.0 2.7286 0.0 0.0 0.0 1059.489236857474 1059.489236857474 3.836805933051153 0.0 0.0 0.0 0 1.0 2.0 0.0 0.2614393726401688 {[QV]|[N{I|L}]|[RA]|[KV]}N 2.7286 - 59 1 2.352 48134.0 0.6100000143051147 2187 4087 6275 SUDHL4_400M_050219_1,6276 SUDHL4_400M_050219_1,6276,VQQWRNWMLQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6277 32.843 741.0 154340.0 25 0 14781.0 + 40432 VIIKGTQVY 9 148 510.80643563963577 1019.5983183460716 2 510.8078491091728 MULTI CID FTMS 0 0 0 6275 85930.7109375 0.3958541083185596 -2 0.0306434631347656 2 Unmodified _VIIKGTQVY_ ENSG00000144028|ENST00000323853|SNRNP200 48.345845343767074 0.0439967357579942 5 [{I|L}V][QA]V[KT]VY 9 4 + 50.11 0.0 0.0 4.9147 4.9147 81.899 0.0 0.0 0.0 4.000065532235126 4.000065532235126 4.000065532235126 4.000065532235126 0 0.8494850021680094 1.6989700043360187 0.0 0.3252574989159953 [{I|L}V][QA]V[KT]VY;[{I|L}V]{I|L}{[DS]|[MA]|[CV]|TT}V{I|L}VY;[{I|L}V]CV{I|L}V{I|L}VY;[{I|L}V]CVV{I|L}{I|L}VY;{[TV]|[{I|L}S]}NAK{I|L}{I|L}VY;[{I|L}A]NSK{I|L}{I|L}VY;{[VA]|[{I|L}G]}QSK{I|L}{I|L}VY;[VS]QAK{I|L}{I|L}VY;{[TV]|[{I|L}S]}GGAK{I|L}{I|L}VY;{[VA]|[{I|L}G]}[SG]AK{I|L}{I|L}VY 4.9147;4.5223;4.2495;4.0319;4.0142;3.9965;3.5447;3.3559;3.1111;2.9356 -;-;-;-;-;-;-;-;-;- 567 + 1 2.352 91616.8 1.0 2188 4087 6275 SUDHL4_400M_050219_1,6277 SUDHL4_400M_050219_1,6277,VIIKGTQVY True True VIIKGTQVY 32.843212 510.807849109173 972157.0625 6275.0 ENSG00000144028|ENST00000323853|SNRNP200 4.640295743942261 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6278 32.852 486.0 197420.0 25 0 33681.0 + -1 VIMVPKSK 8 129 459.2800148656777 0 459.2798644900322 PEAK CID FTMS 0 0 0 6275 163613.65625 0.0995959843523784 7 -0.2902793884277344 3 Oxidation (M) _VIM(Oxidation (M))VPKSK_ REV__ENSG00000044524|ENST00000336596|EPHA3;REV__ENSG00000145242|ENST00000613740|EPHA5;REV__nc|ENSG00000145242|P54756-2|EPHA5;REV__nc|ENSG00000145242|P54756-3|EPHA5;REV__nc|ENSG00000145242|P54756|EPHA5 9.347437153973935 0.5488964601725408 5 S 1 -1 6.9897 0.0 0.0 0.76261 0.0 0.0 255.1715164119874 571.3225191705686 826.4940355825561 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.76261 + + 11 + 1 2.352 79401.0 1.0 2189 4087 6275 SUDHL4_400M_050219_1,6278 SUDHL4_400M_050219_1,6278,VIMVPKSK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6279 32.86 462.0 225560.0 25 0 12045.0 + 23763 LVALIHAY 8 146 450.2706067083789 0 450.2711364626884 PEAK CID FTMS 0 0 0 6275 96853.7265625 1.0 0 0.0 4 Unmodified _LVALIHAY_ REV__ENSG00000186810|ENST00000373693|CXCR3;REV__nc|ENSG00000186810|P49682-2|CXCR3 17.086550045450526 0.4618975036900928 5 AP 2 -1 7.0783 0.0 0.0 0.78777 0.0 0.0 213.14990374703285 514.2626436822874 727.4125474293203 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AP 0.78777 - 36 + 1 2.352 83890.6 1.0 2190 4087 6275 SUDHL4_400M_050219_1,6279 SUDHL4_400M_050219_1,6279,LVALIHAY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6281 32.865 126.0 519870.0 25 0 46385.0 + 5624 DPCIYKFYEFY 11 57 744.3312453833815 1486.647937833563 2 744.3317138552666 MULTI CID FTMS 0 0 0 6280 403432.71875 0.6598337710299591 4 -0.1834068298339843 1 Unmodified _DPCIYKFYEFY_ REV__ENSG00000163840|ENST00000296161|DTX3L 5.731851221503515 0.8481046878870278 5 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 74.751 0.0 0.0 5.0281 5.0281 81.076 0.0 0.0 0.0 8.4023177079483 11.448658907276368 8.4023177079483 3.0102999566398125 0 0.8935078169319297 0.958607314841775 0.0 0.8494850021680094 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}W{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQ[AG]NA{M(Oxidation (M))|F}Y 5.0281;4.8256;4.4629;4.4179;4.4179;4.4179;4.2605;4.2154;4.2154;4.2154 -;-;-;-;-;-;-;-;-;- 768 1 2.352 53413.8 1.0 2191 4088 6280 SUDHL4_400M_050219_1,6281 SUDHL4_400M_050219_1,6281,DPCIYKFYEFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6282 32.879 800.0 135770.0 25 0 8583.4 -1 MLQDPRSQLRQ 11 156 694.3560857551724 1386.6976185771448 2 694.3553954958916 MULTI CID FTMS 0 0 0 6280 73987.796875 0.7580027016303988 4 -0.1834068298339843 2 Oxidation (M) _M(Oxidation (M))LQDPRSQLRQ_ ENSG00000188177|ENST00000409871|ZC3H6 11.494710602746466 0.7960433852372589 5 {[QV]|[N{I|L}]|[RA]|[KV]}N[KC][PS]QSANV{I|L} 13 -1 + 63.105 0.0 0.0 4.5507 4.5507 81.578 0.0 0.0 0.0 15.682503180159344 16.642078980768076 15.682503180159344 4.771212547196626 0 0.3331367617775115 2.0 1.1861818737241734 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}N[KC][PS]QSANV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}N[VS][QT]QSANV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}N[KC][PS]NTANV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[SG][{M(Oxidation (M))|F}T]HQSANV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}N[VS][QT]NTANV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[SG][{M(Oxidation (M))|F}T]HNTANV{I|L};[KA]M{[QN]|[E{I|L}]|[KN]}[PS]QSANV{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SASQ[PS]D[TP]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NA[RD][C(Carbamidomethyl (C))K]ANV{I|L};[KP]NYQ[PS]D[TP]{I|L}Q 4.5507;4.2067;4.1584;3.8626;3.8143;3.4703;3.4198;3.1936;3.1303;3.1259 -;-;-;-;-;-;-;-;-;- 5835 1 2.352 81967.1 0.5899999737739563 2192 4088 6280 SUDHL4_400M_050219_1,6282 SUDHL4_400M_050219_1,6282,MLQDPRSQLRQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6283 32.884 249.0 314510.0 25 0 34359.0 + -1 SVMYKLATT 9 98 515.2677609430972 1028.5209689529945 2 515.2676269412041 MULTI CID FTMS 0 0 0 6280 96841.21875 0.5434697742936813 -2 0.0500221252441406 3 Oxidation (M) _SVM(Oxidation (M))YKLATT_ REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8;REV__nc|ENSG00000189195|Q5XKL5|BTBD8 19.256988751693697 0.3154191944385105 5 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K 9 -1 + 49.313 0.0 0.0 4.7945 4.7945 81.415 0.0 0.0 0.0 19.875947803046387 3.904961589532192 3.904961589532192 3.904961589532192 0 0.6747425010840047 1.6989700043360187 0.2887254899964357 0.4886692553033356 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K;[VS]Y{M(Oxidation (M))|F}ATTK{I|L};{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}ATTK{I|L};{[{M(Oxidation (M))|F}C]|[YS]}YT[PG]T{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}Y[PG]TT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}YT[PG]TK{I|L};{[{M(Oxidation (M))|F}C]|[YS]}Y[PG]TTK{I|L} 4.7945;4.4149;2.7297;2.3501;1.2584;0.89076;0.87871;0.51109 -;-;-;-;-;-;-;- 135 + 1 2.352 65469.0 1.0 2193 4088 6280 SUDHL4_400M_050219_1,6283 SUDHL4_400M_050219_1,6283,SVMYKLATT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6284 32.897 800.0 103980.0 25 0 6700.1 + 12085 GQGASGTVF 9 113 823.395374174746 822.388097708146 1 823.3962890505791 MULTI CID FTMS 0 0 0 6280 109579.625 0.1966549873579465 8 -0.2764778137207031 4 Unmodified _GQGASGTVF_ ENSG00000180370|ENST00000327134|PAK2 66.45667989310934 0.0225072657982126 5 {[QG]|[NA]}GASGTV{M(Oxidation (M))|F} 9 0 + 46.426 0.0 0.0 5.6453 5.6453 79.673 0.0 0.0 0.0 2.230749808046326 11.505149978319906 2.230749808046326 0.4575749056067479 0 0.8391368308784531 0.0 1.5941876774005248 0.2742275032520141 + + {[QG]|[NA]}GASGTV{M(Oxidation (M))|F};{[QG]|[NA]}QSGTV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}ASGTV{M(Oxidation (M))|F};{[QS]|[NT]}GQGTV{M(Oxidation (M))|F};{[QG]|[NA]}SQGTV{M(Oxidation (M))|F};{[QS]|[NT]}G[AG]GTV{M(Oxidation (M))|F};{[QG]|[NA]}S[AG]GTV{M(Oxidation (M))|F};{[QG]|[NA]}G{[QS]|[NT]}TV{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}KQ{[QG]|[NA]}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}TV{M(Oxidation (M))|F} 5.6453;5.5897;5.3741;4.7644;4.614;3.6382;3.4878;3.1555;3.0357;2.8925 +;-;-;-;-;-;-;-;-;- + 1008 1 2.352 61406.5 0.6200000047683716 2194 4088 6280 SUDHL4_400M_050219_1,6284 SUDHL4_400M_050219_1,6284,GQGASGTVF True True GQGASGTVF 32.89747 823.396289050579 3148009.25 6280.0 ENSG00000180370|ENST00000327134|PAK2 4.93551508585612 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6285 32.911 800.0 211460.0 25 0 10259.0 -1 0 83 851.4206016180812 4252.066625757406 5 851.8192626833916 MULTI CID FTMS 0 0 0 6280 77225.328125 0.9715393872392822 -1 0.0459785461425781 5 5 DQGYAE[EC] 8 -1 67.256 0.0 0.0 1.5817 0.0 0.0 3338.709747540533 0.0 3338.709747540533 0.0 59.80835659879972 0.0 0.0 0 1.3807196863200843 0.0 0.805462187404089 0.4247425010840047 DQGYAE[EC] 1.5817 - 132 1 2.352 123617.0 0.5400000214576721 2195 4088 6280 SUDHL4_400M_050219_1,6285 SUDHL4_400M_050219_1,6285, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6287 32.929 800.0 75229.0 25 0 21402.0 -1 0 35 1188.816722280062 3563.4283374403867 3 1189.486376941204 MULTI CID FTMS 0 0 0 6286 144973.109375 0.4027896184293066 3 -0.1320838928222656 1 5 {M(Oxidation (M))|F}G 2 -1 7.9588 0.0 0.0 0.22335 0.0 0.0 2000.699651992924 1355.629924534673 3356.329576527597 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.22335 - 4 + 1 2.367 60116.8 0.6600000262260437 2196 4089 6286 SUDHL4_400M_050219_1,6287 SUDHL4_400M_050219_1,6287, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6288 32.934 271.0 268690.0 25 0 22449.0 + 2271 AQGGQEAYF 9 102 485.7166639109568 969.4187748887136 2 485.7169677615166 MULTI CID FTMS 0 0 0 6286 126695.09375 1.0 0 0.0 2 Unmodified _AQGGQEAYF_ REV__ENSG00000124608|ENST00000244571|AARS2 19.256988751693697 0.3154191944385105 5 [AG]QN{[CP]|[EA]}A{M(Oxidation (M))|F}Y 9 -1 + 28.178 0.0 0.0 2.9067 2.9067 73.178 0.0 0.0 0.0 0.9151498112134996 2.96172637791933 0.9151498112134996 0.9151498112134996 0 0.8935078169319297 1.0 0.9247425010840048 0.9749073637206094 [AG]QN{[CP]|[EA]}A{M(Oxidation (M))|F}Y;QQN{[CP]|[EA]}A{M(Oxidation (M))|F}Y;[AG]QGG{[CP]|[EA]}A{M(Oxidation (M))|F}Y;QQGG{[CP]|[EA]}A{M(Oxidation (M))|F}Y;[AG][AG]N{[CP]|[EA]}A{M(Oxidation (M))|F}Y;[AG][AG]GG{[CP]|[EA]}A{M(Oxidation (M))|F}Y 2.9067;2.8123;2.5962;2.4962;1.7366;0.64516 -;-;-;-;-;- 300 1 2.367 59507.7 1.0 2197 4089 6286 SUDHL4_400M_050219_1,6288 SUDHL4_400M_050219_1,6288,AQGGQEAYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6289 32.94 315.0 193310.0 25 0 19353.0 + 44170 YLDTINRSV 9 93 540.7873688846757 1079.5601848361514 2 540.7874633669853 MULTI CID FTMS 0 0 0 6286 117179.46875 1.0 0 0.0 3 Unmodified _YLDTINRSV_ ENSG00000168883|ENST00000323701|USP39;ENST00000459775.5_1_2:85830068-85850777:+|nuORF;ENST00000465282.5_1_2:85839448-85850777:+|nuORF;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;nc|ENSG00000168883|Q53GS9-3|USP39 20.41453444215458 0.284085796332423 5 Y{I|L}DT{I|L} 5 4 58.928 0.0 0.0 5.4585 0.0 0.0 0.0 471.23126517732 471.23126517732 37.95880017344075 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + Y{I|L}DT{I|L} 5.4585 + + 112 + 1 2.367 52181.4 1.0 2198 4089 6286 SUDHL4_400M_050219_1,6289 SUDHL4_400M_050219_1,6289,YLDTINRSV False True YLDTINRSV 32.939866 540.787463366985 1165304.875 6286.0 ENST00000465282.5_1_2:85839448-85850777:+|nuORF;;ENSG00000168883|ENST00000323701|USP39;;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;;ENST00000459775.5_1_2:85830068-85850777:+|nuORF;;nc|ENSG00000168883|Q53GS9-3|USP39 3.467168092727661 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6290 32.949 488.0 132250.0 25 0 8168.2 + -1 SVLYCRGEF 9 101 565.7705859112147 1129.5266188892292 2 566.2693359255791 MULTI CID FTMS 0 0 0 6286 112812.140625 1.0 0 0.0 4 Carbamidomethyl (C) _SVLYC(Carbamidomethyl (C))RGEF_ REV__ENSG00000137261|ENST00000378214|KIAA0319;REV__nc|ENSG00000137261|Q5VV43-2|KIAA0319;REV__nc|ENSG00000137261|Q5VV43-3|KIAA0319;REV__nc|ENSG00000137261|Q5VV43-4|KIAA0319 15.847184025352805 0.4077185912009129 5 NY 2 -1 21.454 0.0 0.0 1.8993 0.0 0.0 834.4099634710636 0.0 834.4099634710636 0.0 -2.727562184969372 -2.727562184969372 0.0 0 0.0 0.0 0.0 0.5 NY 1.8993 - 255 + 1 2.367 55238.2 1.0 2199 4089 6286 SUDHL4_400M_050219_1,6290 SUDHL4_400M_050219_1,6290,SVLYCRGEF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6291 32.952 177.0 289120.0 25 0 18756.0 37620 TLLHMKWKK 9 100 395.5720704817471 1183.6943820454412 3 395.5724670290947 MULTI CID FTMS 0 0 0 6286 107191.625 0.7128234285861536 -1 0.0513229370117187 5 Unmodified _TLLHMKWKK_ ENSG00000167723|ENST00000576742|TRPV3;ENST00000575865.1_1_17:3431270-3433380:-|nuORF;nc|ENSG00000167723|Q8NET8-2|TRPV3;nc|ENSG00000167723|Q8NET8-3|TRPV3 10.150570793230772 0.5619192000662246 5 TT{I|L}KY{I|L}Q 7 6 66.362 0.0 0.0 5.6064 0.0 0.0 0.0 333.1820467584594 333.1820467584594 50.69505235207588 0.0 0.0 0.0 0 0.2614393726401688 1.3979400086720375 0.0 0.3807196863200844 TT{I|L}KY{I|L}Q 5.6064 - 95 + 1 2.367 45565.8 1.0 2200 4089 6286 SUDHL4_400M_050219_1,6291 SUDHL4_400M_050219_1,6291,TLLHMKWKK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6292 32.966 800.0 95117.0 25 0 9718.3 + 3550 CYEWRKQQLEQ 11 113 755.8609154208258 1509.7072779084515 2 755.8604614138603 MULTI CID FTMS 0 0 0 6286 98463.296875 1.0 0 0.0 6 Unmodified _CYEWRKQQLEQ_ REV__ENSG00000167202|ENST00000300584|TBC1D2B;REV__nc|ENSG00000167202|Q9UPU7-2|TBC1D2B 8.745405648335112 0.8338865417133445 5 [NP]ANS[NP]EG{I|L}{I|L} 11 -1 50.448 0.0 0.0 3.3416 0.0 0.0 0.0 400.149269445814 400.149269445814 12.700638799651893 0.0 0.0 0.0 0 0.0 0.638272163982407 0.6549471895720984 1.836696871556164 [NP]ANS[NP]EG{I|L}{I|L} 3.3416 - 3924 1 2.367 56590.5 0.5799999833106995 2201 4089 6286 SUDHL4_400M_050219_1,6292 SUDHL4_400M_050219_1,6292,CYEWRKQQLEQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6293 32.977 626.0 123100.0 25 0 12591.0 -1 ISEENFRVM 9 102 570.7711567749167 1139.5277606166333 2 570.7716552615166 MULTI CID FTMS 0 0 0 6286 94863.1875 0.318974807519496 6 -0.2148780822753906 7 Oxidation (M) _ISEENFRVM(Oxidation (M))_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 34.93206674587334 0.1032771302489716 5 {I|L}SEEN{M(Oxidation (M))|F}RV{M(Oxidation (M))|F} 9 -1 + 70.184 0.0 0.0 6.1591 6.1591 89.836 0.0 0.0 0.0 54.699790304455206 5.376502752895817 5.376502752895817 9.208187539523742 0 1.305462187404089 1.2218487496163564 0.3807196863200844 0.0 {I|L}SEEN{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};{I|L}SEEGG{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};[YT]{[HG]|PP}N{M(Oxidation (M))|F}[VG]V{M(Oxidation (M))|F};[YT][VG]{M(Oxidation (M))|F}N{[HG]|PP}[{M(Oxidation (M))|F}V] 6.1591;5.351;0.036438;0.020357 +;-;-;- + 186 + 1 2.367 65738.4 1.0 2202 4089 6286 SUDHL4_400M_050219_1,6293 SUDHL4_400M_050219_1,6293,ISEENFRVM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6294 32.983 267.0 334000.0 25 0 116030.0 + 16586 KDLLDCRL 8 104 488.2673366223747 0 488.2674743533134 PEAK CID FTMS 0 0 0 6286 120372.6015625 0.4514010821888607 -6 0.1493911743164062 8 Unmodified _KDLLDCRL_ REV__nc|ENSG00000151150|Q12955-7|ANK3 7.910154910731844 0.5650536163073903 5 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.47245 0.0 0.0 742.3628917732667 82.06681238345936 824.4297041567261 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.47245 - 34 + 1 2.367 73745.9 1.0 2203 4089 6286 SUDHL4_400M_050219_1,6294 SUDHL4_400M_050219_1,6294,KDLLDCRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6296 32.988 52.0 822390.0 25 0 160330.0 + + -1 VSDFGGRSL 9 69 469.2406234740638 936.4666940149276 2 469.2406799197197 MULTI CID FTMS 0 0 0 6295 709047.625 0.3595068698149671 2 -0.0605392456054687 1 Oxidation (M) _SVDLLIM(Oxidation (M))M_ ENSG00000132383|ENST00000254719|RPA1 26.34127834903884 0.4900704351052977 5 VSD{M(Oxidation (M))|F}G 5 -1 64.068 0.0 0.0 6.8415 0.0 0.0 0.0 428.2264498346313 428.2264498346313 54.3753063169585 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 VSD{M(Oxidation (M))|F}G 6.8415 - 79 + 1 2.376 40085.4 1.0 2204 4090 6295 SUDHL4_400M_050219_1,6296 SUDHL4_400M_050219_1,6296,SVDLLIMM False False VSDFGGRSL 32.988061 469.24067991972 18504248.0 6295.0 ENSG00000132383|ENST00000254719|RPA1 4.572681427001953 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6297 32.989 36.0 1537000.0 25 0 171790.0 + 1964 AMRPGLEGY 9 71 497.2450971643455 992.475641395491 2 497.2451660037041 MULTI CID FTMS 0 0 0 6295 1382416.75 1.0 0 0.0 2 Unmodified _AMRPGLEGY_ ENSG00000100297|ENST00000216122|MCM5 32.78568957990786 0.1150597335874693 5 [PG]{I|L}ETKEGY 9 6 + 60.02 0.0 0.0 6.0475 6.0475 92.652 0.0 0.0 0.0 15.150312510170778 34.51889325719485 15.150312510170778 17.95880017344075 0 1.0 1.3979400086720375 0.0 0.0 [PG]{I|L}ETKEGY;[PG]{I|L}ER{[DS]|[MA]|[CV]|TT}GY;[PG]{I|L}[MN]{I|L}WY;{[DA]|[EG]}[{I|L}P]TKEGY;[PG]{I|L}E[VG]{[DS]|[MA]|[CV]|TT}GY;[PG]{I|L}ER{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y;{[DS]|[MA]|[CV]|TT}[VG]HT[KS]Y;[PG]{I|L}E[VG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y;{[DA]|[EG]}[{I|L}P]R{[DS]|[MA]|[CV]|TT}GY;{[DA]|[EG]}[{I|L}P]R{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y 6.0475;4.238;4.0891;3.6366;3.3102;3.0815;3.0015;2.1483;1.8271;0.67059 -;-;-;-;-;-;-;-;-;- 204 1 2.376 49655.4 1.0 2205 4090 6295 SUDHL4_400M_050219_1,6297 SUDHL4_400M_050219_1,6297,AMRPGLEGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6298 32.991 59.0 1044300.0 25 0 228080.0 + 14792 ILDQKINEV 9 80 536.3057712066559 1070.5969894801117 2 536.3054687380791 MULTI CID FTMS 0 0 0 6295 767812.0 0.0392040527309245 -7 0.2209358215332031 3 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 45.69961567697781 0.0497987121815769 5 {I|L}{I|L}DQ 4 5 65.477 0.0 0.0 6.116 0.0 0.0 0.0 598.3218477838499 598.3218477838499 32.51393987558032 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.7302046884880937 + {I|L}{I|L}DQ 6.116 + + 704 + 1 2.376 51981.2 1.0 2206 4090 6295 SUDHL4_400M_050219_1,6298 SUDHL4_400M_050219_1,6298,ILDQKINEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6299 32.993 109.0 431480.0 25 0 59467.0 + 16763 KFSPNTSQF 9 85 528.2610316504386 1054.507510367677 2 528.2611572146416 MULTI CID FTMS 0 0 0 6295 349725.25 1.0 0 0.0 4 Unmodified _KFSPNTSQF_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 32.78568957990786 0.1150597335874693 5 DRR{M(Oxidation (M))|F}SQ{M(Oxidation (M))|F} 7 6 35.433 0.0 0.0 3.3602 0.0 0.0 100.06426436591951 0.0 100.06426436591951 0.0 19.23522370441385 0.0 0.0 0 0.9489700043360187 0.0 0.9957416651753048 0.0 DRR{M(Oxidation (M))|F}SQ{M(Oxidation (M))|F} 3.3602 - 199 1 2.376 44260.7 1.0 2207 4090 6295 SUDHL4_400M_050219_1,6299 SUDHL4_400M_050219_1,6299,KFSPNTSQF True True KFSPNTSQF 32.993038 528.261157214642 1669211.125 6295.0 nc|ENSG00000154473|O43684-2|BUB3;;ENSG00000154473|ENST00000368865|BUB3 6.546819527943929 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6300 32.995 111.0 318640.0 25 0 18927.0 10712 FWGVPASSSL 10 88 525.7657818470998 1049.5170107609997 2 525.7664062380791 MULTI CID FTMS 0 0 0 6295 315064.5 0.403462827191189 2 -0.0605392456054687 5 Unmodified _FWGVPASSSL_ ENST00000439943.5_1_20:42839629-42843553:+|nuORF 37.97399986684836 0.1789611706409123 5 GTSS{I|L} 5 6 49.196 0.0 0.0 4.6875 0.0 0.0 586.2887440412125 0.0 586.2887440412125 0.0 30.75257498915996 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 GTSS{I|L} 4.6875 - 227 1 2.376 31250.5 1.0 2208 4090 6295 SUDHL4_400M_050219_1,6300 SUDHL4_400M_050219_1,6300,FWGVPASSSL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6301 33.003 442.0 346160.0 25 0 18193.0 + 38202 TPRHIIVRF 9 173 380.23233742673193 1137.6751828803958 3 380.2322265505791 MULTI CID FTMS 0 0 0 6295 146813.28125 0.8233402937756471 -3 0.1688461303710937 6 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 16.565877749689598 0.3882643987948875 5 T[YK]V{I|L}{I|L}{M(Oxidation (M))|F}VR 9 5 + 45.666 0.0 0.0 4.014 4.014 85.208 0.0 0.0 0.0 27.70738267894401 7.205938151799742 7.205938151799742 9.999999999999991 0 0.8494850021680094 0.0 0.0 0.0 T[YK]V{I|L}{I|L}{M(Oxidation (M))|F}VR;T[YK]V{I|L}{M(Oxidation (M))|F}{I|L}VR;T[YK]V{I|L}{I|L}[RV]{M(Oxidation (M))|F};T[YK]V{M(Oxidation (M))|F}{I|L}{I|L}VR;T[YK]V{I|L}{M(Oxidation (M))|F}[RV]{I|L};T[YK]V{M(Oxidation (M))|F}{I|L}[RV]{I|L} 4.014;3.135;2.9505;2.1473;1.4164;0.42867 -;-;-;-;-;- 142 + 1 2.376 121388.8 1.0 2209 4090 6295 SUDHL4_400M_050219_1,6301 SUDHL4_400M_050219_1,6301,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 6302 33.008 258.0 352340.0 25 0 24961.0 + 31611 RQYAKDIGF 9 104 549.290813066323 1096.567073199446 2 549.2925292849541 MULTI CID FTMS 0 0 0 6295 140478.5625 0.0746646156896156 -6 0.20770263671875 7 Unmodified _RQYAKDIGF_ ENSG00000213741|ENST00000245458|RPS29;ENST00000401543.2_1_9:90140306-90140387:+|nuORF;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50050387-50052826:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 56.17704186161178 0.0281986971544335 5 {[{M(Oxidation (M))|F}H]|[RQ]}YAKD{I|L}G{M(Oxidation (M))|F} 9 0 + 65.503 0.0 0.0 5.9735 5.9735 85.335 0.0 0.0 0.0 4.762036441594191 47.54461421146287 4.762036441594191 4.247425010840047 0 1.25 0.0 0.4247425010840047 0.6694451763165201 + + {[{M(Oxidation (M))|F}H]|[RQ]}YAKD{I|L}G{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YAKDG{I|L}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YT{[NV]|[RG]}{I|L}G{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YT[VG]G{I|L}G{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YAKGD{I|L}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YT{[NV]|[RG]}G{I|L}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YA[VS]G{I|L}G{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YT[VG]GG{I|L}{M(Oxidation (M))|F};{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]GKA[QP]G{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YA[VS]GG{I|L}{M(Oxidation (M))|F} 5.9735;5.5862;4.4654;4.3515;4.205;4.0781;4.077;3.9641;3.7615;3.6896 +;-;-;-;-;-;-;-;-;- + 804 1 2.376 71243.7 1.0 2210 4090 6295 SUDHL4_400M_050219_1,6302 SUDHL4_400M_050219_1,6302,RQYAKDIGF True True RQYAKDIGF 33.008022 549.292529284954 20784068.75 6295.0 ENSG00000213741|ENST00000245458|RPS29;;ENST00000401543.2_1_9:90140306-90140387:+|nuORF;;nc|ENSG00000213741|P62273-2|RPS29;;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;;ENST00000557367.2_1_14:50050387-50052826:-|nuORF 6.770139853159587 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6303 33.012 203.0 218040.0 25 0 13942.0 + + 31935 RFNPNASSSF 10 79 564.2600172250221 1126.5054815168442 2 564.2591430544853 MULTI CID FTMS 0 0 0 6295 136191.171875 0.9564450654756562 -2 0.1228675842285156 8 Unmodified _RVDCNLSSSF_ ENST00000534096.5_1_19:50838046-50848012:-|nuORF;chr19:50337135-50361969|12|40.75|0.1|8.63|-|2|NAPSB,None|1;chr19:50337135-50337313|10|14.4|0.0|12.96|-|2|NAPSB,None|1 21.53697664764585 0.484802182336468 5 ASSS{M(Oxidation (M))|F} 5 -1 36.95 0.0 0.0 3.2801 0.0 0.0 629.2909391512403 0.0 629.2909391512403 0.0 19.960762528683706 0.0 0.0 0 0.8935078169319297 0.0 0.8807196863200843 0.0 ASSS{M(Oxidation (M))|F} 3.2801 - 65 1 2.376 38894.3 1.0 2211 4090 6295 SUDHL4_400M_050219_1,6303 SUDHL4_400M_050219_1,6303,RVDCNLSSSF False False RFNPNASSSF 33.011926 564.259143054485 0.0 6295.0 ENST00000534096.5_1_19:50838046-50848012:-|nuORF;;chr19:50337135-50361969|12|40.75|0.1|8.63|-|2|NAPSB,None|1;;chr19:50337135-50337313|10|14.4|0.0|12.96|-|2|NAPSB,None|1 6.113751252492269 2.0 False 10.0 True non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_1 6305 33.018 203.0 266200.0 25 0 26621.0 -1 0 85 494.2528011663688 493.2455246997688 1 494.2528869509697 MULTI CID FTMS 0 0 0 6304 142307.375 0.4666370183341463 3 -0.09234619140625 1 5 C(Carbamidomethyl (C)) 1 -1 13.495 0.0 0.0 2.7359 0.0 0.0 315.20394252379066 0.0 315.20394252379066 0.0 1.901056208558032 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 2.7359 - 23 + 1 2.376 48459.4 1.0 2212 4091 6304 SUDHL4_400M_050219_1,6305 SUDHL4_400M_050219_1,6305, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6306 33.032 800.0 291270.0 25 0 32427.0 -1 0 90 852.4156141002715 4257.041688168357 5 852.8169433474541 MULTI CID FTMS 0 0 0 6304 70165.3984375 0.4374783237782599 -1 0.0290870666503906 2 5 V[PS]GGY[PS]PQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 12 -1 41.08 0.0 0.0 0.96499 0.0 0.0 2975.441976230799 0.0 2975.441976230799 0.0 8.873949984654246 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 V[PS]GGY[PS]PQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 0.96499 - 580 + 1 2.376 164362.2 0.5699999928474426 2213 4091 6304 SUDHL4_400M_050219_1,6306 SUDHL4_400M_050219_1,6306, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6307 33.035 143.0 586660.0 25 0 47084.0 + 14860 ILHDDEVTV 9 114 520.76669882364 1039.51884471408 2 520.7670165896416 MULTI CID FTMS 0 0 0 6304 277967.375 0.0668665541749412 -7 0.2367897033691406 3 Unmodified _ILHDDEVTV_ ENSG00000137818|ENST00000260379|RPLP1;ENST00000487304.6_1_15:69745218-69746066:+|nuORF;nc|ENSG00000137818|P05386-2|RPLP1 60.38955033654506 0.025866396858536 5 {I|L}{I|L}HDDEVTV 9 0 + 51.186 0.0 0.0 4.924 4.924 84.662 0.0 0.0 0.0 6.071808871005679 35.931087926598266 6.071808871005679 7.825834421237516 0 0.7742275032520141 1.2218487496163564 0.9163865622122672 0.0 + + {I|L}{I|L}HDDEVTV;{I|L}{I|L}HDDD{I|L}TV;{I|L}{I|L}HDDVETV;[H{I|L}]{I|L}DDEVTV;{I|L}{I|L}HDDETVV;[HD]{I|L}{I|L}DEVTV;{I|L}{I|L}HDDTVEV;{I|L}{I|L}HDDVTEV;[H{I|L}]D{I|L}DEVTV;[H{I|L}]{I|L}DDD{I|L}TV 4.924;4.1712;4.0477;3.918;3.7202;3.2864;3.2804;3.2772;3.2306;3.1652 +;-;-;-;-;-;-;-;-;- + 715 1 2.376 69253.8 1.0 2214 4091 6304 SUDHL4_400M_050219_1,6307 SUDHL4_400M_050219_1,6307,ILHDDEVTV True True ILHDDEVTV 33.035059 520.767016589642 41459716.0 6304.0 ENST00000487304.6_1_15:69745218-69746066:+|nuORF;;nc|ENSG00000137818|P05386-2|RPLP1;;ENSG00000137818|ENST00000260379|RPLP1 6.520710468292236 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6308 33.043 468.0 189230.0 25 0 17806.0 + 17364 KLYTGLREV 9 103 539.816473183877 1077.6183934345538 2 539.8176147341728 MULTI CID FTMS 0 0 0 6304 101446.640625 0.8806336247219275 -2 0.1006317138671875 4 Unmodified _KLYTGLREV_ ENSG00000036257|ENST00000264414|CUL3;nc|ENSG00000036257|Q13618-2|CUL3 15.248480904072842 0.4239247793462406 5 K{I|L}YT 4 5 41.855 0.0 0.0 3.884 0.0 0.0 0.0 569.3027457680882 569.3027457680882 26.38017150373301 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 + K{I|L}YT 3.884 + + 223 + 1 2.376 74120.6 1.0 2215 4091 6304 SUDHL4_400M_050219_1,6308 SUDHL4_400M_050219_1,6308,KLYTGLREV False True KLYTGLREV 33.043348 539.817614734173 456677.15625 6304.0 nc|ENSG00000036257|Q13618-2|CUL3;;ENSG00000036257|ENST00000264414|CUL3 4.648083051045735 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6310 33.048 26.0 2087900.0 25 0 512610.0 + 36228 SVYPPPPEK 9 66 507.2705057552719 1012.5264585773438 2 507.2708312869072 MULTI CID FTMS 0 0 0 6309 1773856.125 0.5208789488080404 2 -0.0608940124511718 1 Unmodified _SVYPPPPEK_ REV__ENSG00000104341|ENST00000521545|LAPTM4B;REV__nc|ENSG00000104341|Q86VI4|LAPTM4B 18.1463463914782 0.3454829746528889 5 [VS]YMATT{I|L}K 9 -1 + 80.06 0.0 0.0 7.9069 7.9069 98.187 0.0 0.0 0.0 52.61230030668848 11.471449248951942 11.471449248951942 80.05957525565542 0 0.8494850021680094 2.0 0.7742275032520141 0.0 [VS]YMATT{I|L}K 7.9069 - 59 + 1 2.376 46923.5 1.0 2216 4092 6309 SUDHL4_400M_050219_1,6310 SUDHL4_400M_050219_1,6310,SVYPPPPEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6311 33.049 47.0 1478000.0 25 0 222450.0 + 23322 LTALKTLHG 9 54 477.2927396543278 952.5709263754557 2 477.2926818728447 MULTI CID FTMS 0 0 0 6309 1388856.125 0.4100255960416179 9 -0.2058677673339843 2 Unmodified _LTALKTLHG_ REV__ENSG00000153107|ENST00000341068|ANAPC1;REV__ENST00000485325.1_1_2:112560984-112579093:-|nuORF 21.53697664764585 0.2571576504437394 5 {I|L}TAP 4 -1 52.735 0.0 0.0 5.5361 0.0 0.0 0.0 567.3266957201464 567.3266957201464 32.27752226111541 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}TAP 5.5361 - 44 + 1 2.376 59431.2 1.0 2217 4092 6309 SUDHL4_400M_050219_1,6311 SUDHL4_400M_050219_1,6311,LTALKTLHG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6312 33.053 180.0 454050.0 25 0 52621.0 + 31613 RQYAKDIGF 9 109 366.5294146139882 1096.5664144421646 3 366.5294372439384 MULTI CID FTMS 0 0 0 6309 191881.46875 0.3340316026763842 -4 0.1834068298339843 3 Unmodified _RQYAKDIGF_ ENSG00000213741|ENST00000245458|RPS29;ENST00000401543.2_1_9:90140306-90140387:+|nuORF;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50050387-50052826:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 25.399314129420983 0.2080152500878129 5 {[{M(Oxidation (M))|F}H]|[RQ]}YAKDG{I|L}{M(Oxidation (M))|F} 9 2 + 40.283 0.0 0.0 3.6736 3.6736 80.922 0.0 0.0 0.0 5.642492736872597 24.71008436253157 5.642492736872597 7.257724967479852 0 0.3182503180159344 0.0 0.4247425010840047 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}YAKDG{I|L}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YAKGD{I|L}{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KDG{I|L}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}Y[KQ]D{I|L}{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}KGD{I|L}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YAK{[TV]|[{I|L}S]}[MT];[QP]KH[VG]DG{I|L}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}[KT][{M(Oxidation (M))|F}T]G{I|L}{M(Oxidation (M))|F};[QP]KH[VG]GD{I|L}{M(Oxidation (M))|F} 3.6736;3.0117;1.8508;1.5346;1.189;1.1255;0.8651;0.71437;0.20324 -;-;-;-;-;-;-;-;- 203 1 2.376 68623.9 1.0 2218 4092 6309 SUDHL4_400M_050219_1,6312 SUDHL4_400M_050219_1,6312,RQYAKDIGF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6313 33.062 502.0 196030.0 25 0 11275.0 + 31117 RLLQQNTQL 9 136 557.3223315888857 1112.6301102445714 2 557.3221313357353 MULTI CID FTMS 0 0 0 6309 129638.2421875 0.7581552994128826 -1 0.0314521789550781 4 Unmodified _RLLQQNTQL_ ENSG00000090447|ENST00000204517|TFAP4;ENST00000575300.1_1_16:4312060-4322792:-|nuORF 56.17704186161178 0.0281986971544335 5 [R{I|L}]{I|L}QQNTQ{I|L} 9 0 + 64.324 0.0 0.0 5.7813 5.7813 89.361 0.0 0.0 0.0 4.137342758552691 40.47467346693252 4.137342758552691 9.208187539523747 0 0.5189301784845296 0.0 0.4247425010840047 0.805462187404089 + + [R{I|L}]{I|L}QQNTQ{I|L};[R{I|L}]{I|L}[AG]QNTQ{I|L};[R{I|L}]{I|L}QQNT[AG]{I|L};[R{I|L}]{I|L}QQGGTQ{I|L};[R{I|L}]{I|L}Q[AG]NTQ{I|L};[Q{I|L}][R{I|L}]QNTQ{I|L};RRN[{I|L}V]NTQ{I|L};[R{I|L}]{I|L}QQGGT[AG]{I|L};[R{I|L}]{I|L}[AG]QNT[AG]{I|L};[R{I|L}]{I|L}[AG][AG]NTQ{I|L} 5.7813;4.9537;4.9537;4.9537;4.9537;4.9077;4.2543;4.13;4.13;4.13 +;-;-;-;-;-;-;-;-;- + 563 1 2.376 81756.9 1.0 2219 4092 6309 SUDHL4_400M_050219_1,6313 SUDHL4_400M_050219_1,6313,RLLQQNTQL True True RLLQQNTQL 33.061765 557.322131335735 607315.75 6309.0 ENST00000575300.1_1_16:4312060-4322792:-|nuORF;;ENSG00000090447|ENST00000204517|TFAP4 6.331750392913818 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6314 33.067 265.0 284670.0 25 0 33984.0 + 7737 ELDTVGQGV 9 100 459.2311410120831 916.4477290909664 2 459.2298766970634 MULTI CID FTMS 0 0 0 6309 127084.09375 0.5418819857386398 -4 0.1834068298339843 5 Unmodified _ELDTVGQGV_ ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14 23.1484247019978 0.2366544122328345 5 RQGV 4 6 24.467 0.0 0.0 2.6698 0.0 0.0 458.1970099520975 0.0 458.1970099520975 0.0 10.541782235751931 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.5451140161145328 RQGV 2.6698 - 107 + 1 2.376 61866.8 1.0 2220 4092 6309 SUDHL4_400M_050219_1,6314 SUDHL4_400M_050219_1,6314,ELDTVGQGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6316 33.075 224.0 347580.0 25 0 48432.0 + 2380 AQMPTVHY 8 92 473.7269087564361 945.4392645796722 2 473.7265197634697 MULTI CID FTMS 0 0 0 6315 135186.453125 0.3877729647901931 -9 0.2914848327636719 1 Unmodified _AQMPTVHY_ ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A 32.116972079565 0.368454113111938 5 [QA]MPTV{[WN]|[YH]} 8 0 + 24.168 0.0 0.0 2.5562 2.5562 76.848 0.0 0.0 0.0 11.403348869447925 1.726307269461742 1.726307269461742 4.336555609385716 0 0.0 0.721246399047171 0.0 0.0 + + [QA]MPTV{[WN]|[YH]};[QA]MPW{[QS]|[NT]}V;[QA]MPW[NS]{I|L};[QA]MPT{[WN]|[YH]}V;[QA]M[H{I|L}][{M(Oxidation (M))|F}T]V 2.5562;2.0975;2.0516;1.2037;0.43268 +;-;-;-;- + 81 + 1 2.379 64527.5 1.0 2221 4093 6315 SUDHL4_400M_050219_1,6316 SUDHL4_400M_050219_1,6316,AQMPTVHY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6317 33.089 800.0 110360.0 25 0 13761.0 + + -1 YERSMMSAY 9 125 569.2386869181968 1136.4628209031937 2 569.2397949099541 MULTI CID FTMS 0 0 0 6315 55892.47265625 0.5363058191455747 2 -0.0595512390136718 2 Carbamidomethyl (C) _VEYC(Carbamidomethyl (C))FWAY_ nc|ENSG00000159140|P18583-2|SON;nc|ENSG00000159140|P18583-10|SON;nc|ENSG00000159140|P18583-5|SON;nc|ENSG00000159140|P18583-7|SON;nc|ENSG00000159140|P18583-6|SON;nc|ENSG00000159140|P18583-3|SON;nc|ENSG00000159140|P18583-4|SON;ENSG00000159140|ENST00000356577|SON;SON|p.M1049L|1|0.36|ENSG00000159140|chr21:33552376-33552376|A/C|missense_variant;nc|ENSG00000159140|P18583-9|SON 26.34127834903884 0.4900704351052977 5 MDAY 4 -1 33.576 0.0 0.0 2.9545 0.0 0.0 638.2825794904312 0.0 638.2825794904312 0.0 23.743434768119016 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 MDAY 2.9545 - 104 1 2.379 72674.5 0.5199999809265137 2222 4093 6315 SUDHL4_400M_050219_1,6317 SUDHL4_400M_050219_1,6317,VEYCFWAY False False YERSMMSAY 33.088554 569.239794909954 621314.9375 6315.0 nc|ENSG00000159140|P18583-2|SON;;nc|ENSG00000159140|P18583-10|SON;;nc|ENSG00000159140|P18583-5|SON;;nc|ENSG00000159140|P18583-7|SON;;nc|ENSG00000159140|P18583-6|SON;;nc|ENSG00000159140|P18583-3|SON;;nc|ENSG00000159140|P18583-4|SON;;ENSG00000159140|ENST00000356577|SON;;SON|p.M1049L|1|0.36|ENSG00000159140|chr21:33552376-33552376|A/C|missense_variant;;nc|ENSG00000159140|P18583-9|SON 2.8326163291931152 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6318 33.094 315.0 205620.0 25 0 17817.0 + 43183 VYVTNIAYY 9 108 553.2834315837798 1104.5523102343595 2 553.2838012576103 MULTI CID FTMS 0 0 0 6315 115868.515625 0.4013602522432725 -9 0.2914848327636719 3 Unmodified _VYVTNIAYY_ REV__ENSG00000126858|ENST00000545287|RHOT1;REV__nc|ENSG00000126858|Q8IXI2-2|RHOT1;REV__nc|ENSG00000126858|Q8IXI2-3|RHOT1;REV__nc|ENSG00000126858|Q8IXI2-4|RHOT1;REV__nc|ENSG00000126858|Q8IXI2-5|RHOT1;REV__nc|ENSG00000126858|Q8IXI2|RHOT1 10.823927491677226 0.5436922275383211 5 VY{M(Oxidation (M))|F}AT[{I|L}T]KY 9 -1 + 72.132 0.0 0.0 6.5304 6.5304 85.318 0.0 0.0 0.0 33.28340932684426 7.113037394097432 7.113037394097432 3.0102999566398125 0 0.7059771852360797 2.0 0.0 0.0 VY{M(Oxidation (M))|F}AT[{I|L}T]KY;YV{M(Oxidation (M))|F}AT[{I|L}T]KY;Y{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}TAAKY;YY{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}KY;YY[PG]T[{I|L}T]KY 6.5304;6.2579;2.9407;2.4121;2.383 -;-;-;-;- 226 + 1 2.379 55728.5 1.0 2223 4093 6315 SUDHL4_400M_050219_1,6318 SUDHL4_400M_050219_1,6318,VYVTNIAYY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6319 33.1 307.0 258360.0 25 0 33527.0 + + 39999 VMIDKNPGI 9 101 493.7982723475735 985.5819917619468 2 493.7979919314384 MULTI CID FTMS 0 0 0 6315 85016.3046875 0.820255134845037 -4 0.1553268432617187 4 Unmodified _VGDKLVAVSV_ ENSG00000126814|ENST00000261249|TRMT5 10.073929032068715 0.6785112666868882 5 NA[TA]{I|L}{I|L}V 7 -1 15.08 0.0 0.0 1.53 0.0 0.0 285.1683827130875 0.0 285.1683827130875 0.0 1.1003883185862406 0.0 0.0 0 0.1237125054200235 0.0 0.0 0.3252574989159953 NA[TA]{I|L}{I|L}V 1.53 - 180 1 2.379 67441.4 1.0 2224 4093 6315 SUDHL4_400M_050219_1,6319 SUDHL4_400M_050219_1,6319,VGDKLVAVSV False False VMIDKNPGI 33.099898 493.797991931438 382581.5625 6315.0 ENSG00000126814|ENST00000261249|TRMT5 1.7356373071670532 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6320 33.104 243.0 239890.0 25 0 48935.0 20498 LLLFMMTV 8 98 484.2734730930344 0 484.2746765017509 PEAK CID FTMS 0 0 0 6315 107532.3203125 1.0 0 0.0 5 Unmodified _LLLFMMTV_ ENSG00000114646|ENST00000264723|CSPG5;nc|ENSG00000114646|O95196-3|CSPG5;nc|ENSG00000114646|O95196|CSPG5 6.354104778181461 0.5763711549229614 5 {I|L} 1 7 6.9897 0.0 0.0 0.72317 0.0 0.0 626.2958647878282 224.1295107477172 850.4253755355454 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.72317 + + 6 + 1 2.379 51237.3 1.0 2225 4093 6315 SUDHL4_400M_050219_1,6320 SUDHL4_400M_050219_1,6320,LLLFMMTV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6322 33.111 223.0 374280.0 25 0 51999.0 + -1 PVLCALLL 8 122 449.7764147700653 897.5382766069306 2 449.7769348025322 MULTI CID FTMS 0 0 0 6321 171414.0625 0.5714543783495233 -3 0.09234619140625 1 Carbamidomethyl (C) _PVLC(Carbamidomethyl (C))ALLL_ REV__ENST00000355243.7_1_10:102587940-102588264:+|nuORF 11.114462752807354 0.7467182956244686 5 [VS]GY 4 -1 17.465 0.0 0.0 1.9459 0.0 0.0 0.0 488.3283211228088 488.3283211228088 1.7077352436601956 0.0 0.0 0.0 0 0.0 0.4559319556497244 0.5994850021680094 0.0 [VS]GY 1.9459 - 183 1 2.379 71215.2 1.0 2226 4094 6321 SUDHL4_400M_050219_1,6322 SUDHL4_400M_050219_1,6322,PVLCALLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6323 33.117 347.0 419610.0 25 0 80933.0 -1 0 118 399.7811745862333 797.5477962392666 2 399.7816345095634 MULTI CID FTMS 0 0 0 6321 189872.546875 0.7843739105553035 -6 0.2443008422851562 2 5 [VG]{I|L}KR{I|L}{I|L} 7 -1 + 39.46 0.0 0.0 4.9477 4.9477 88.675 0.0 0.0 0.0 24.10351040942807 9.793191455385395 9.793191455385395 13.226825097560422 0 0.6307196863200843 1.6989700043360187 0.0 0.0 [VG]{I|L}KR{I|L}{I|L};{I|L}[VG]KR{I|L}{I|L} 4.9477;3.2893 -;- 40 + 1 2.379 118632.7 1.0 2227 4094 6321 SUDHL4_400M_050219_1,6323 SUDHL4_400M_050219_1,6323, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6324 33.126 516.0 151720.0 25 0 11391.0 + 42012 VQQPGQTNFY 10 110 591.2831527684482 1180.5517526036963 2 591.2836791872978 MULTI CID FTMS 0 0 0 6321 158115.28125 0.9967999965326564 -2 0.0608940124511718 3 Unmodified _VQQPGQTNFY_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 34.40172386719151 0.2166836008404837 5 {M(Oxidation (M))|F}NTY 4 8 26.498 0.0 0.0 2.2445 0.0 0.0 536.2596169974236 116.0510729425414 652.310689939965 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.4247425010840047 {M(Oxidation (M))|F}NTY 2.2445 - 497 + 1 2.379 65382.8 1.0 2228 4094 6321 SUDHL4_400M_050219_1,6324 SUDHL4_400M_050219_1,6324,VQQPGQTNFY False True VQQPGQTNFY 33.126379 591.283679187298 886674.375 6321.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 6.92927900950114 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6326 33.131 134.0 376280.0 25 0 32637.0 -1 LNWVDEMQVQL 11 84 695.8396900343929 1389.6648271355857 2 695.8392822146416 MULTI CID FTMS 0 0 0 6325 357845.25 0.6625673413472921 3 -0.0601234436035156 1 Oxidation (M) _LNWVDEM(Oxidation (M))QVQL_ ENSG00000151914|ENST00000680361|DST;ENST00000521104.1_1_6:56504020-56557947:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;nc|ENSG00000151914|Q03001-13|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-3|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001-9|DST;nc|ENSG00000151914|Q03001|DST 23.78978130925829 0.5336113198261219 5 {[QV]|[N{I|L}]|[RA]|[KV]}NA 4 -1 50.908 0.0 0.0 3.6634 0.0 0.0 0.0 974.4357981651356 974.4357981651356 16.44441207759882 0.0 0.0 0.0 0 1.5 2.0 0.0 0.5731074559755159 {[QV]|[N{I|L}]|[RA]|[KV]}NA 3.6634 - 91 1 2.379 43688.5 1.0 2229 4095 6325 SUDHL4_400M_050219_1,6326 SUDHL4_400M_050219_1,6326,LNWVDEMQVQL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6327 33.137 281.0 253540.0 25 0 22996.0 + -1 LLLRMMLY 8 109 542.7990544808678 1083.5835560285354 2 543.3009521365166 MULTI CID FTMS 0 0 0 6325 226126.34375 0.3465254706679617 -15 0.4360885620117187 2 2 Oxidation (M) _LLLRM(Oxidation (M))M(Oxidation (M))LY_ REV__ENST00000247833.11_2_12:70132798-70149222:+|nuORF 10.183394434864962 0.7604730176254005 5 {I|L}{I|L}{M(Oxidation (M))|F} 3 -1 34.705 0.0 0.0 3.2028 0.0 0.0 0.0 707.321970213388 707.321970213388 15.981362441963327 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F} 3.2028 - 32 + 1 2.379 60437.5 1.0 2230 4095 6325 SUDHL4_400M_050219_1,6327 SUDHL4_400M_050219_1,6327,LLLRMMLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6329 33.147 479.0 258690.0 25 0 52306.0 + 12244 GQYGNPLNKY 10 138 577.28541436534 1152.55627579748 2 577.2861205935478 MULTI CID FTMS 0 0 0 6328 96043.8515625 0.5270657240865129 3 -0.0980949401855468 1 Unmodified _GQYGNPLNKY_ ENSG00000137845|ENST00000260408|ADAM10;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF 39.94969957227396 0.1580982266129622 5 NAYGN[{I|L}P]NKY 10 2 + 54.957 0.0 0.0 4.7683 4.7683 85.542 0.0 0.0 0.0 40.34826562528984 9.908037477650636 9.908037477650636 9.164539485499256 0 0.7614393726401688 0.0 0.0 0.75 NAYGN[{I|L}P]NKY;NAYGN[{I|L}P]GGKY;NAYGGG[{I|L}P]NKY;NAYG{[VA]|[{I|L}G]}[PG]NKY;NAY{[QV]|[N{I|L}]|[RA]|[KV]}[PG]NKY;NAY{[QV]|[N{I|L}]|[RA]|[KV]}[HM]KY;N[YQ]N[{I|L}P]NKY;{[QN]|[E{I|L}]|[KN]}P{I|L}{[YC]|[HE]}[MT][PS];{[DS]|[MA]|[CV]|TT}[WM][{I|L}P]NKY;[{I|L}P]NK{[YC]|[HE]}[MT][PS] 4.7683;3.9732;3.9732;3.5592;3.4026;2.8149;1.8067;0.8363;0.59379;0.40628 -;-;-;-;-;-;-;-;-;- 299 + 1 2.379 97273.9 1.0 2231 4096 6328 SUDHL4_400M_050219_1,6329 SUDHL4_400M_050219_1,6329,GQYGNPLNKY False True GQYGNPLNKY 33.147479 577.286120593548 1152837.375 6328.0 ENSG00000137845|ENST00000260408|ADAM10;;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;;ENST00000561149.1_1_15:58974496-59041769:-|nuORF 6.99393383661906 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6330 33.152 241.0 243990.0 25 0 19181.0 + 18231 KVFSGALQEA 10 111 525.2849007094067 1048.5552484856132 2 525.2855102419853 MULTI CID FTMS 0 0 0 6328 114151.4765625 0.2619551340225821 -5 0.1245231628417968 2 Unmodified _KVFSGALQEA_ BTG2|p.L46V|1|0.63|ENSG00000159388|chr1:203305742-203305742|C/G|missense_variant;ENSG00000159388|ENST00000290551|BTG2 20.41453444215458 0.5050059513928961 5 Q{I|L}{[QS]|[NT]}RTV 7 9 15.275 0.0 0.0 1.4568 0.0 0.0 218.093958057682 0.0 218.093958057682 0.0 0.0587740506032652 0.0 0.0 0 0.3494850021680094 0.0 0.3494850021680094 0.0 Q{I|L}{[QS]|[NT]}RTV 1.4568 - 349 + 1 2.379 56084.9 1.0 2232 4096 6328 SUDHL4_400M_050219_1,6330 SUDHL4_400M_050219_1,6330,KVFSGALQEA False True KVFSGALQEA 33.151985 525.285510241985 1991731.5 6328.0 BTG2|p.L46V|1|0.63|ENSG00000159388|chr1:203305742-203305742|C/G|missense_variant;;ENSG00000159388|ENST00000290551|BTG2;;BTG2|p.R34S|1|0.26|ENSG00000159388|chr1:203305708-203305708|G/T|missense_variant 2.968808650970459 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6331 33.159 389.0 199740.0 25 0 25466.0 + 7950 ELSGRSLL 8 116 437.7532270729964 873.4919012127929 2 437.7529174685478 MULTI CID FTMS 0 0 0 6328 95755.59375 0.6219935983465356 -1 0.0102767944335937 3 Unmodified _ELSGRSLL_ REV__ENSG00000155158|ENST00000512701|TTC39B;REV__ENST00000505732.5_1_9:15186859-15307321:-|nuORF;REV__nc|ENSG00000155158|Q5VTQ0-2|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-3|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-4|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-5|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0-6|TTC39B;REV__nc|ENSG00000155158|Q5VTQ0|TTC39B 11.640296217721598 0.738950129755968 5 {[TV]|[{I|L}S]}[WK]VE{I|L} 7 -1 + 32.452 0.0 0.0 3.7152 3.7152 75.884 0.0 0.0 0.0 5.016894462103991 19.3529633077462 5.016894462103991 1.7609125905568137 0 0.4247425010840047 0.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}[WK]VE{I|L};{[TV]|[{I|L}S]}[WK]D{I|L}{I|L};AA[KS][KQ]E{I|L} 3.7152;3.5136;1.8085 -;-;- 99 1 2.379 66329.4 1.0 2233 4096 6328 SUDHL4_400M_050219_1,6331 SUDHL4_400M_050219_1,6331,ELSGRSLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6333 33.175 800.0 132380.0 25 0 8006.3 -1 MDNITRQNQFY 11 104 744.3312453833815 1486.647937833563 2 744.3324462771416 MULTI CID FTMS 0 0 0 6332 119834.59375 0.1959952879848213 13 -0.24444580078125 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 5 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 71.495 0.0 0.0 4.8091 4.8091 83.325 0.0 0.0 0.0 6.073030467403328 10.6960839181164 6.073030467403328 6.073030467403328 0 0.7429928190999391 0.721246399047171 0.0 1.5138793319624575 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAAANNA{M(Oxidation (M))|F}Y 4.8091;4.4006;4.3615;4.2739;4.1989;4.1989;4.1989;4.0061;3.953;3.8779 -;-;-;-;-;-;-;-;-;- 2404 1 2.379 79002.2 0.5799999833106995 2234 4097 6332 SUDHL4_400M_050219_1,6333 SUDHL4_400M_050219_1,6333,MDNITRQNQFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6334 33.177 98.0 1077100.0 25 0 167790.0 + 14820 ILFGHENRV 9 97 362.2010927274353 1083.581448782506 3 362.2004882693291 MULTI CID FTMS 0 0 0 6332 378834.125 0.3337973518015547 -5 0.1153717041015625 2 Unmodified _ILFGHENRV_ ENSG00000069966|ENST00000261837|GNB5;nc|ENSG00000069966|O14775-2|GNB5;nc|ENSG00000069966|O14775-3|GNB5 18.721224879955976 0.3299216912490967 5 {I|L}{I|L}{M(Oxidation (M))|F}GHVE[RN] 9 2 + 70.754 0.0 0.0 6.5296 6.5296 83.831 0.0 0.0 0.0 53.08567777923823 6.06446953481715 6.06446953481715 1.7609125905568137 0 0.2059771852360797 1.5228787452803376 0.3807196863200844 0.3494850021680094 {I|L}{I|L}{M(Oxidation (M))|F}GHVE[RN];{I|L}{I|L}{M(Oxidation (M))|F}GHEV[RN];{I|L}{I|L}{M(Oxidation (M))|F}GVHE[RN];{I|L}{I|L}{M(Oxidation (M))|F}VGHE[RN];{I|L}{I|L}{M(Oxidation (M))|F}GHQQ{[QN]|[E{I|L}]|[KN]};{I|L}{I|L}V{M(Oxidation (M))|F}GHE[RN];{I|L}{I|L}{M(Oxidation (M))|F}GV{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QN]|[E{I|L}]|[KN]};{I|L}{I|L}{M(Oxidation (M))|F}GV{[NV]|[RG]}[WH];{I|L}{I|L}{M(Oxidation (M))|F}VG{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QN]|[E{I|L}]|[KN]};{I|L}{I|L}{M(Oxidation (M))|F}VG{[NV]|[RG]}[WH] 6.5296;6.3671;5.9005;5.6227;5.3548;5.0223;4.7257;4.6721;4.4479;4.3943 -;-;-;-;-;-;-;-;-;- 432 + 1 2.379 90494.6 1.0 2235 4097 6332 SUDHL4_400M_050219_1,6334 SUDHL4_400M_050219_1,6334,ILFGHENRV False True ILFGHENRV 33.177254 362.200488269329 5277409.0 6332.0 nc|ENSG00000069966|O14775-2|GNB5;;ENSG00000069966|ENST00000261837|GNB5;;nc|ENSG00000069966|O14775-3|GNB5 5.360535939534505 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6335 33.186 524.0 243640.0 25 0 36313.0 + 31350 RMVGQVLGA 9 136 465.7630768458254 929.5116007584508 2 465.7635986208916 MULTI CID FTMS 0 0 0 6332 137408.6875 0.4590723436944864 -4 0.0921287536621093 3 Unmodified _RMVGQVLGA_ ENSG00000130741|ENST00000253039|EIF2S3 30.63653989081413 0.1413794767160703 5 GQV{I|L}Q 5 5 41.938 0.0 0.0 4.5119 0.0 0.0 386.2131520001969 0.0 386.2131520001969 0.0 24.82516286606369 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.0 GQV{I|L}Q 4.5119 - 772 1 2.379 100568.5 1.0 2236 4097 6332 SUDHL4_400M_050219_1,6335 SUDHL4_400M_050219_1,6335,RMVGQVLGA False True RMVGQVLGA 33.186471 465.763598620892 1446381.75 6332.0 ENSG00000130741|ENST00000253039|EIF2S3 3.5880869229634604 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6337 33.193 232.0 346370.0 25 0 23924.0 + 12109 GQIEVVKY 8 113 468.263484394127 934.512415855054 2 468.2623779177666 MULTI CID FTMS 0 0 0 6336 199138.09375 0.4045527218411855 -6 0.1429176330566406 1 Unmodified _GQIEVVKY_ ENSG00000139645|ENST00000267116|ANKRD52 23.1484247019978 0.5573009939494978 5 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D 6 7 17.791 0.0 0.0 1.9037 0.0 0.0 0.0 181.12103336897897 181.12103336897897 1.504023819079773 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}D 1.9037 - 183 1 2.379 68050.9 1.0 2237 4098 6336 SUDHL4_400M_050219_1,6337 SUDHL4_400M_050219_1,6337,GQIEVVKY False True GQIEVVKY 33.193185 468.262377917767 2147035.5 6336.0 ENSG00000139645|ENST00000267116|ANKRD52 3.501418113708496 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6338 33.207 800.0 166210.0 25 0 6736.3 -1 AQRIVKQMANL 11 123 644.3630809649121 0 644.3614990115166 PEAK CID FTMS 0 0 0 6336 110299.0234375 0.8487965035892487 4 -0.0667648315429687 2 Oxidation (M) _AQRIVKQM(Oxidation (M))ANL_ ENST00000472821.5_1_3:149814257-149842756:+|nuORF 18.1463463914782 0.3750318954284983 5 {I|L}EAQ 4 -1 14.658 0.0 0.0 1.1392 0.0 0.0 661.3681774554117 181.09868799381096 842.4668654492226 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.2614393726401688 {I|L}EAQ 1.1392 - 257 + 1 2.379 103051.4 0.6299999952316284 2238 4098 6336 SUDHL4_400M_050219_1,6338 SUDHL4_400M_050219_1,6338,AQRIVKQMANL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6339 33.221 800.0 173460.0 25 0 22855.0 + 14883 ILLDNDHYAM 10 131 610.7845524924986 1219.5545520517971 2 610.7847778201103 MULTI CID FTMS 0 0 0 6336 115853.609375 0.3461379308091161 -5 0.1196746826171875 3 Oxidation (M) _ILLDNDHYAM(Oxidation (M))_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 75.76082778847304 0.0187510588500744 5 {I|L}{I|L}{I|L}DNDHYA{M(Oxidation (M))|F} 10 0 + 89.563 0.0 0.0 7.3439 7.3439 94.94 0.0 0.0 0.0 49.75772496747986 15.026975159433531 15.026975159433531 12.971736348700093 0 0.805462187404089 2.0 1.0356668758921828 0.3807196863200844 + + {I|L}{I|L}{I|L}DNDHYA{M(Oxidation (M))|F};{I|L}{I|L}{I|L}DGGDHYA{M(Oxidation (M))|F};{I|L}{I|L}{I|L}D{[{M(Oxidation (M))|F}H]|[RQ]}D[NS]{M(Oxidation (M))|F};{I|L}{I|L}[WY]YD[NS]{M(Oxidation (M))|F};{I|L}{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}C(Carbamidomethyl (C))SYA{M(Oxidation (M))|F};{I|L}{I|L}{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[CG]SYA{M(Oxidation (M))|F};{I|L}{I|L}[YE]T{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F};[HD]ND{I|L}YA{I|L}{I|L}{M(Oxidation (M))|F};[HD]NDY{I|L}A{I|L}{I|L}{M(Oxidation (M))|F};{I|L}[WY]Y{I|L}D[NS]{M(Oxidation (M))|F} 7.3439;6.2802;6.1557;5.3696;5.3498;4.5984;4.5496;3.4516;3.3072;3.1775 +;-;-;-;-;-;-;-;-;- + 2175 + 1 2.379 104657.9 0.6299999952316284 2239 4098 6336 SUDHL4_400M_050219_1,6339 SUDHL4_400M_050219_1,6339,ILLDNDHYAM True False ILLDNDHYAM 33.220858 610.78477782011 1646840.125 6336.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 6.785589059193929 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6340 33.235 800.0 53061.0 25 0 2603.9 -1 0 87 723.3982605152835 722.3909840486834 1 724.3963500857353 MULTI CID FTMS 0 0 0 6336 66783.4296875 0.5749116811676702 -26 0.7422294616699219 4 5 VH 2 -1 10.969 0.0 0.0 1.5184 0.0 0.0 332.2017406528344 151.04036890201408 483.2421095548484 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VH 1.5184 - 52 + 1 2.379 41405.7 0.5099999904632568 2240 4098 6336 SUDHL4_400M_050219_1,6340 SUDHL4_400M_050219_1,6340, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6343 33.243 3.9 11126000.0 25 0 2727700.0 + 14793 ILDQKINEV 9 56 536.3057712066559 1070.5969894801117 2 536.3064453005791 MULTI CID FTMS 0 0 0 6342 12700254.0 0.6484678899419842 3 -0.03863525390625 1 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 49.55428908609986 0.0413471690215031 5 {I|L}{I|L}DQ 4 5 65.037 0.0 0.0 6.0748 0.0 0.0 0.0 598.3206881158811 598.3206881158811 32.07371172794112 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.805462187404089 + {I|L}{I|L}DQ 6.0748 + + 507 + 1 2.376 38145.5 1.0 2241 4100 6342 SUDHL4_400M_050219_1,6343 SUDHL4_400M_050219_1,6343,ILDQKINEV True True ILDQKINEV 33.243328 536.306445300579 368129376.0 6342.0 ENST00000446285.5_1_2:10584646-10585158:-|nuORF;;ENSG00000115758|ENST00000234111|ODC1 4.977676232655843 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6344 33.245 96.0 502150.0 25 0 46736.0 + 1965 AMRPGLEGY 9 76 497.2450971643455 992.475641395491 2 497.2445861697197 MULTI CID FTMS 0 0 0 6342 364102.375 0.2633810498896226 10 -0.1646614074707031 2 Unmodified _AMRPGLEGY_ ENSG00000100297|ENST00000216122|MCM5 32.78568957990786 0.1150597335874693 5 [PG]{I|L}TEKEGY 9 6 + 63.453 0.0 0.0 6.3934 6.3934 92.74 0.0 0.0 0.0 11.637441867146556 38.5313202099066 11.637441867146556 12.859662492281052 0 1.0 1.0969100130080565 0.3054621874040891 0.0 [PG]{I|L}TEKEGY;{[VA]|[{I|L}G]}PTEKEGY;[PG]{I|L}T[SG]{I|L}EGY;{[VA]|[{I|L}G]}PT[SG]{I|L}EGY;[PG]{I|L}[MN]{I|L}WY;{[VA]|[{I|L}G]}{[MG]|[TS]}[PG]{I|L}EGY;[PG]{I|L}TQ{[ET]|[MV]}[{M(Oxidation (M))|F}T];{[VA]|[{I|L}G]}P[MN]{I|L}WY;{[VA]|[{I|L}G]}{[MG]|[TS]}[PG]{I|L}WY;[PG]{I|L}T[AG]{[ET]|[MV]}[{M(Oxidation (M))|F}T] 6.3934;5.0977;4.2479;2.9522;2.7365;2.5339;1.5584;1.4408;1.3719;0.32286 -;-;-;-;-;-;-;-;-;- 192 1 2.376 44994.9 1.0 2242 4100 6342 SUDHL4_400M_050219_1,6344 SUDHL4_400M_050219_1,6344,AMRPGLEGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6345 33.249 208.0 276160.0 25 0 16956.0 + + -1 AMAPTSPQI 9 92 458.2356922348805 914.4568315365608 2 458.2359496951103 MULTI CID FTMS 0 0 0 6342 130427.875 0.244983858281582 -8 0.1951560974121093 3 Carbamidomethyl (C) _SPTC(Carbamidomethyl (C))IPQI_ ENSG00000143436|ENST00000368830|MRPL9 24.67388899826682 0.525179942228231 5 {[TV]|[{I|L}S]}[PG]CTPQ{I|L} 9 -1 {[TV]|[{I|L}S]}[PG]C + + 33.008 2.14 0.46806 3.6096 3.6096 55.297 0.0 0.0 0.0 0.0 22.523656471886326 0.0 0.0 0 0.7614393726401688 0.0 0.0 1.1237125054200234 {[TV]|[{I|L}S]}[PG]CTPQ{I|L} 3.6096 - 119 + 1 2.376 50251.1 1.0 2243 4100 6342 SUDHL4_400M_050219_1,6345 SUDHL4_400M_050219_1,6345,SPTCIPQI False False AMAPTSPQI 33.249357 458.23594969511 2496997.25 6342.0 ENSG00000143436|ENST00000368830|MRPL9 1.841543088356654 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6348 33.258 62.0 1002200.0 25 0 69716.0 + 31612 RQYAKDIGF 9 77 549.290813066323 1096.567073199446 2 549.2910644412041 MULTI CID FTMS 0 0 0 6347 893106.8125 0.4746879220456868 6 -0.1302680969238281 1 Unmodified _RQYAKDIGF_ ENSG00000213741|ENST00000245458|RPS29;ENST00000401543.2_1_9:90140306-90140387:+|nuORF;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50050387-50052826:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 37.97399986684836 0.0865783450051559 5 {NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]P[EP]{I|L}G{M(Oxidation (M))|F} 10 7 + 44.855 0.0 0.0 4.0905 4.0905 81.947 0.0 0.0 0.0 0.9324524717610316 20.797349202424584 0.9324524717610316 7.257724967479859 0 1.1989700043360187 2.0 0.4247425010840047 0.8494850021680094 {NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]P[EP]{I|L}G{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]P[EP]G{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P][WH]{I|L}G{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P][WH]G{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]P[WP]{I|L}{M(Oxidation (M))|F};[KQ][YE]{[NV]|[RG]}{I|L}G{M(Oxidation (M))|F};[KQ][YE]{[NV]|[RG]}G{I|L}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]S[YV][YK] 4.0905;3.4287;3.3134;2.6515;1.671;1.5617;0.89986;0.36922 -;-;-;-;-;-;-;- 124 1 2.376 54388.4 1.0 2244 4102 6347 SUDHL4_400M_050219_1,6348 SUDHL4_400M_050219_1,6348,RQYAKDIGF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6349 33.261 138.0 289850.0 25 0 20876.0 11888 GLVGVAFPSL 10 80 480.2796429158698 958.5447328985396 2 480.2797729372978 MULTI CID FTMS 0 0 0 6347 97196.921875 0.6936266903978477 1 -0.02410888671875 2 Unmodified _GLVGVAFPSL_ ENST00000554628.5_1_14:89016776-89017810:-|nuORF 39.957323273325 0.1580177220464651 5 {[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]GAPS{I|L} 10 3 + 62.374 0.0 0.0 6.5071 6.5071 83.056 0.0 0.0 0.0 26.69006780958576 1.249387366082999 1.249387366082999 1.249387366082999 0 0.3807196863200844 2.0 1.0941876774005248 0.0 {[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]GAPS{I|L};{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]GAPTV;{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]QPS{I|L};{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}V]QPTV;[R{I|L}][R{M(Oxidation (M))|F}]APS{I|L};[R{I|L}][R{M(Oxidation (M))|F}]APTV;{NN|[MP]|[D{I|L}]|[EV]}[KS]{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}] 6.5071;6.3768;5.8257;5.6953;3.3953;3.265;0.38742 -;-;-;-;-;-;- 236 + 1 2.376 34228.7 1.0 2245 4102 6347 SUDHL4_400M_050219_1,6349 SUDHL4_400M_050219_1,6349,GLVGVAFPSL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6350 33.263 138.0 259410.0 25 0 21535.0 + 17414 KMSQVAPSL 9 67 480.7628515204204 959.5111501076408 2 480.7627441287041 MULTI CID FTMS 0 0 0 6347 134554.765625 0.5931661567546133 -2 0.0145263671875 3 Unmodified _KMSQVAPSL_ ENSG00000101361|ENST00000329276|NOP56;ENST00000480992.5_1_20:2635438-2636687:+|nuORF;ENST00000484998.5_1_20:2635830-2636687:+|nuORF 21.53697664764585 0.2571576504437394 5 {NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}V]VAPS{I|L} 9 3 {NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}V]V + + 29.641 -2.5527 -0.44527 3.0892 3.0892 54.312 0.0 0.0 0.0 0.0 18.38217795639597 0.0 0.0 0 1.0 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}V]VAPS{I|L} 3.0892 - 74 + 1 2.376 33223.3 1.0 2246 4102 6347 SUDHL4_400M_050219_1,6350 SUDHL4_400M_050219_1,6350,KMSQVAPSL False True KMSQVAPSL 33.263405 480.762744128704 1818562.125 6347.0 ENST00000480992.5_1_20:2635438-2636687:+|nuORF;;ENST00000484998.5_1_20:2635830-2636687:+|nuORF;;ENSG00000101361|ENST00000329276|NOP56 3.812518994013468 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6351 33.277 800.0 85995.0 25 0 3098.9 -1 QKHIMAERNVL 11 105 677.8654036742415 1353.716254415283 2 677.8646118044853 MULTI CID FTMS 0 0 0 6347 111350.640625 0.91481319665386 -6 0.1166114807128906 4 Oxidation (M) _QKHIM(Oxidation (M))AERNVL_ ENSG00000104205|ENST00000521198|SGK3;nc|ENSG00000288602|Q96BR1-2|SGK3 15.248480904072842 0.7179608125786238 5 [AG]GS[KS][HV]QSANV{I|L} 14 -1 + 60.834 0.0 0.0 4.4939 4.4939 80.781 0.0 0.0 0.0 3.534175687836409 36.15365386032288 3.534175687836409 4.115128158613111 0 0.3494850021680094 1.0457574905606752 1.8494850021680087 0.3807196863200844 [AG]GS[KS][HV]QSANV{I|L};{[QG]|[NA]}S[KS][HV]QSANV{I|L};[AG]P[WK][PS]QSANV{I|L};[QP][WK][PS]QSANV{I|L};{[SA]|[TG]}N[KS][HV]QSANV{I|L};[AG]V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HV]QSANV{I|L};{[NV]|[RG]}HH[HV]QSANV{I|L};[AG]P[YV][HV]QSANV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HV]QSANV{I|L};[QP][YV][HV]QSANV{I|L} 4.4939;4.1899;4.1314;3.8293;3.7658;3.7411;3.6078;3.4652;3.4391;3.1631 -;-;-;-;-;-;-;-;-;- 480 1 2.376 55619.1 0.7699999809265137 2247 4102 6347 SUDHL4_400M_050219_1,6351 SUDHL4_400M_050219_1,6351,QKHIMAERNVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6353 33.282 112.0 689810.0 25 0 57247.0 + 45388 YTAPPGPRL 9 98 486.2702580571223 970.5259631810446 2 486.2694885134697 MULTI CID FTMS 0 0 0 6352 262265.28125 0.8705856297425844 -2 0.027923583984375 1 Unmodified _YTAPPGPRL_ ENSG00000140398|ENST00000355059|NEIL1;ENST00000561643.5_1_15:75639698-75645080:+|nuORF;ENST00000564738.5_1_15:75641306-75646619:+|nuORF;ENST00000564951.1_1_15:75639698-75641681:+|nuORF 28.486842064014134 0.1687311288560894 5 [YT]AP 4 5 36.682 0.0 0.0 3.7796 0.0 0.0 0.0 535.3004786203278 535.3004786203278 27.47425010840047 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + [YT]AP 3.7796 + + 56 + 1 2.376 63169.5 1.0 2248 4103 6352 SUDHL4_400M_050219_1,6353 SUDHL4_400M_050219_1,6353,YTAPPGPRL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6354 33.286 227.0 217340.0 25 0 35765.0 -1 0 75 500.268419597484 499.261143130884 1 500.2687255740166 MULTI CID FTMS 0 0 0 6352 133490.28125 0.7574153023214909 6 -0.1221694946289062 2 5 GSY 3 -1 20.177 0.0 0.0 4.0414 0.0 0.0 174.1408561209215 0.0 174.1408561209215 0.0 10.262454366098217 0.0 0.0 0 0.0 0.0 0.0 0.0 GSY 4.0414 - 18 + 1 2.376 45844.7 1.0 2249 4103 6352 SUDHL4_400M_050219_1,6354 SUDHL4_400M_050219_1,6354, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6355 33.294 445.0 153320.0 25 0 6148.3 + + 21007 GAVHDVKDVLDS 12 102 627.8202122828897 1253.6258716325792 2 627.8198730349541 MULTI CID FTMS 0 0 0 6352 102661.1640625 0.8987336395903175 -1 0.02410888671875 3 Unmodified _LNTYSVTRVDS_ ENSG00000161634|ENST00000293371|DCD 12.174745833636583 0.7818979005474666 5 [AG]VHDV{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DS 12 -1 + 55.184 0.0 0.0 4.402 4.402 80.007 0.0 0.0 0.0 6.789102104070508 16.611814434466183 6.789102104070508 3.6015144778263632 0 1.25 0.9208187539523752 0.4247425010840047 0.0 [AG]VHDV{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DS;[AG]VHD[WR]V{I|L}DS;{[QV]|[N{I|L}]|[RA]|[KV]}HDV{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DS;[HV]QDV{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DS;{[QV]|[N{I|L}]|[RA]|[KV]}HD[WR]V{I|L}DS;[AG]VHDV[WR]{I|L}DS;[DV][HQ]V{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}DS;[HV]QD[WR]V{I|L}DS;[DV][HQ][WR]V{I|L}DS;{[QV]|[N{I|L}]|[RA]|[KV]}HDV[WR]{I|L}DS 4.402;4.1147;3.8604;3.602;3.576;3.5357;3.5054;3.3176;3.221;2.9971 -;-;-;-;-;-;-;-;-;- 353 1 2.376 56209.1 1.0 2250 4103 6352 SUDHL4_400M_050219_1,6355 SUDHL4_400M_050219_1,6355,LNTYSVTRVDS False False GAVHDVKDVLDS 33.294257 627.819873034954 581732.375 6352.0 ENSG00000161634|ENST00000293371|DCD 5.852486928304036 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6356 33.308 800.0 113810.0 25 0 6083.4 -1 KMYQEEIQEWY 11 125 781.847130394998 1561.679707856796 2 782.3489257693291 MULTI CID FTMS 0 0 0 6352 93300.0859375 0.6207591193403942 -1 0.02410888671875 4 Oxidation (M) _KM(Oxidation (M))YQEEIQEWY_ ENSG00000186815|ENST00000335509|TPCN1;ENST00000551127.5_1_12:113730719-113733878:+|nuORF;ENST00000552077.5_1_12:113726380-113733878:+|nuORF;nc|ENSG00000186815|Q9ULQ1-3|TPCN1 5.296884461304476 0.8501568894076437 5 QQNA{M(Oxidation (M))|F}Y 6 -1 51.203 0.0 0.0 3.2787 0.0 0.0 792.338611468169 0.0 792.338611468169 0.0 30.28151250383644 0.0 0.0 0 0.6989700043360187 0.0 0.0 1.579689690656103 QQNA{M(Oxidation (M))|F}Y 3.2787 - 1674 1 2.376 65090.0 0.5600000023841858 2251 4103 6352 SUDHL4_400M_050219_1,6356 SUDHL4_400M_050219_1,6356,KMYQEEIQEWY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6358 33.313 31.0 1540600.0 25 0 155260.0 + 14861 ILHDDEVTV 9 75 520.76669882364 1039.51884471408 2 520.7669555544853 MULTI CID FTMS 0 0 0 6357 1585459.75 0.3813909105900066 6 -0.095123291015625 1 Unmodified _ILHDDEVTV_ ENSG00000137818|ENST00000260379|RPLP1;ENST00000487304.6_1_15:69745218-69746066:+|nuORF;nc|ENSG00000137818|P05386-2|RPLP1 34.10243960390752 0.1078313939113124 5 [{M(Oxidation (M))|F}V]VTDD{I|L} 7 8 39.719 0.0 0.0 3.8209 0.0 0.0 0.0 247.12014185123283 247.12014185123283 -4.326848642619758 0.0 -4.326848642619758 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]VTDD{I|L} 3.8209 - 233 + 1 2.376 42129.2 1.0 2252 4104 6357 SUDHL4_400M_050219_1,6358 SUDHL4_400M_050219_1,6358,ILHDDEVTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6359 33.315 81.0 863410.0 25 0 103700.0 + 15958 ITAPPSRVL 9 72 477.2927396543278 952.5709263754557 2 477.2927429080009 MULTI CID FTMS 0 0 0 6357 693596.5 0.2047672996545124 21 -0.4780654907226562 2 Unmodified _ITAPPSRVL_ ENSG00000099194|ENST00000370355|SCD 27.628801355627647 0.1796483985696185 5 {I|L}TAP 4 5 56.983 0.0 0.0 5.982 0.0 0.0 0.0 567.3266068295226 567.3266068295226 35.55584714187489 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + {I|L}TAP 5.982 + + 51 + 1 2.376 57875.3 1.0 2253 4104 6357 SUDHL4_400M_050219_1,6359 SUDHL4_400M_050219_1,6359,ITAPPSRVL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6360 33.319 209.0 221520.0 25 0 16599.0 + 8916 FAHTNVESL 9 100 509.2541447640584 1016.4937365949168 2 509.2538024783134 MULTI CID FTMS 0 0 0 6357 129584.2734375 0.755271257286205 -3 0.0588264465332031 3 Unmodified _FAHTNVESL_ ENSG00000167004|ENST00000300289|PDIA3;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;ENST00000471856.1_1_1:146649692-146651075:+|nuORF 32.30548876998284 0.1201446275138228 5 C(Carbamidomethyl (C))[YK]S{I|L} 5 7 24.45 0.0 0.0 2.4054 0.0 0.0 347.17119596838853 0.0 347.17119596838853 0.0 3.481362441963327 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 C(Carbamidomethyl (C))[YK]S{I|L} 2.4054 - 104 + 1 2.376 42431.4 1.0 2254 4104 6357 SUDHL4_400M_050219_1,6360 SUDHL4_400M_050219_1,6360,FAHTNVESL True True FAHTNVESL 33.318672 509.253802478313 754287.3125 6357.0 ENST00000471856.1_1_1:146649692-146651075:+|nuORF;;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;;ENSG00000167004|ENST00000300289|PDIA3 4.704819679260254 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6362 33.326 257.0 241910.0 25 0 25390.0 8734 EVLYDSEGL 9 98 512.7475560348713 1023.4805591365426 2 512.7477294802666 MULTI CID FTMS 0 0 0 6361 134983.546875 0.6630082416443872 -1 0.0105972290039062 1 Unmodified _EVLYDSEGL_ ENSG00000126461|ENST00000360565|SCAF1 16.942295170755138 0.3780752226737986 5 TG{I|L} 3 7 26.031 0.0 0.0 2.5434 0.0 0.0 734.3164794019708 0.0 734.3164794019708 0.0 9.041068762088996 0.0 0.0 0 1.0 0.0 0.0 0.0 TG{I|L} 2.5434 - 63 + 1 2.376 54781.1 1.0 2255 4105 6361 SUDHL4_400M_050219_1,6362 SUDHL4_400M_050219_1,6362,EVLYDSEGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6363 33.333 382.0 228650.0 25 0 13617.0 + 32553 SAQGKPLAL 9 134 442.7637126661596 883.5128723991191 2 442.7634460330009 MULTI CID FTMS 0 0 0 6361 95335.1796875 0.4347408937215192 -6 0.0841255187988281 2 Unmodified _SAQGKPLAL_ ENSG00000100401|ENST00000356244|RANGAP1 18.13498045792455 0.3457906370836843 5 [{I|L}P]A 3 6 14.023 0.0 0.0 1.5872 0.0 0.0 0.0 599.3157037802316 599.3157037802316 0.0436480540245014 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 + [{I|L}P]A 1.5872 + + 146 1 2.376 72606.5 1.0 2256 4105 6361 SUDHL4_400M_050219_1,6363 SUDHL4_400M_050219_1,6363,SAQGKPLAL False True SAQGKPLAL 33.332845 442.763446033001 1135543.375 6361.0 ENSG00000100401|ENST00000356244|RANGAP1 4.410139958063762 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6364 33.347 800.0 139430.0 25 0 5534.6 43534 WWWWIWWQWW 10 112 874.9045501847553 1747.7945474363105 2 874.9066650271416 MULTI CID FTMS 0 0 0 6361 84671.1796875 0.593583624887997 -8 0.1599197387695312 3 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 5 [NP]{I|L}NT[WH]DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 15 13 + 58.846 0.0 0.0 3.3669 3.3669 80.016 0.0 0.0 0.0 4.122758320274649 41.97896954015934 4.122758320274649 6.690067809585756 0 1.2302046884880935 0.0 0.3054621874040891 0.9386218330464624 [NP]{I|L}NT[WH]DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NT[WH]WN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NT[WH]DAN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}NT[WH]WN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.3669;2.9841;2.6655;2.2828 -;-;-;- 455 1 2.376 79234.9 0.5400000214576721 2257 4105 6361 SUDHL4_400M_050219_1,6364 SUDHL4_400M_050219_1,6364,WWWWIWWQWW False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_1 6365 33.352 283.0 332930.0 25 0 30832.0 -1 VPLHVKGGE 9 119 489.274286426868 976.534019920536 2 489.2728149294853 MULTI CID FTMS 0 0 0 6361 95787.265625 0.0578585055948775 30 -0.90093994140625 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VPLHVKGGE_ ENST00000483588.2_1_17:16366606-16367262:+|nuORF 10.823927491677226 0.5436922275383211 5 [{I|L}P]YD 4 -1 27.167 0.0 0.0 2.782 0.0 0.0 0.0 485.2924947248479 485.2924947248479 5.563025007672877 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}P]YD 2.782 - 198 1 2.376 74970.6 1.0 2258 4105 6361 SUDHL4_400M_050219_1,6365 SUDHL4_400M_050219_1,6365,VPLHVKGGE False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6367 33.357 98.0 580550.0 25 0 59759.0 + 2381 AQMPTVHY 8 69 473.7269087564361 945.4392645796722 2 473.7265502810478 MULTI CID FTMS 0 0 0 6366 233073.921875 0.6685563798110529 4 -0.0512962341308593 1 Unmodified _AQMPTVHY_ ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A 26.34127834903884 0.4900704351052977 5 [QA]M[TP]V{[WN]|[YH]} 8 0 + 27.853 0.0 0.0 2.9461 2.9461 85.19 0.0 0.0 0.0 15.379099962974152 1.706962271689747 1.706962271689747 27.85335007137462 0 0.5 0.7958800173440752 0.0 0.0 + + [QA]M[TP]V{[WN]|[YH]} 2.9461 + + 37 + 1 2.376 55741.7 1.0 2259 4106 6366 SUDHL4_400M_050219_1,6367 SUDHL4_400M_050219_1,6367,AQMPTVHY False True AQMPTVHY 33.356692 473.726550281048 2704106.5 6366.0 ENSG00000136518|ENST00000429709|ACTL6A;;nc|ENSG00000136518|O96019-2|ACTL6A;;ENSG00000077080|ENST00000160382|ACTL6B 4.327938874562581 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6368 33.36 198.0 294840.0 25 0 24806.0 + -1 VDALSPLMFP 10 90 553.2834315837798 1104.5523102343595 2 553.2839843630791 MULTI CID FTMS 0 0 0 6366 177009.765625 0.6131491699669607 4 -0.0512962341308593 2 Oxidation (M) _VDALSPLM(Oxidation (M))FP_ REV__ENSG00000130348|ENST00000369046|QRSL1;REV__nc|ENSG00000130348|Q9H0R6-2|QRSL1 10.823927491677226 0.6659270209832991 5 [YV]{M(Oxidation (M))|F}ATT{I|L}KY 9 -1 + 70.583 0.0 0.0 6.3902 6.3902 94.764 0.0 0.0 0.0 57.48441900057003 9.436974992327125 9.436974992327125 47.730012720637376 0 0.8494850021680094 2.0 0.3494850021680094 0.0 [YV]{M(Oxidation (M))|F}ATT{I|L}KY;YY[PG]TT{I|L}KY;YYT[PG]T{I|L}KY 6.3902;2.069;1.5239 -;-;- 179 + 1 2.376 52571.1 1.0 2260 4106 6366 SUDHL4_400M_050219_1,6368 SUDHL4_400M_050219_1,6368,VDALSPLMFP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6369 33.37 563.0 119310.0 25 0 20043.0 -1 0 79 954.4318364201062 1906.849119907012 2 954.4339477419852 MULTI CID FTMS 0 0 0 6366 146371.734375 0.8568452099473094 -11 0.2257270812988281 3 5 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 73.588 0.0 0.0 3.8592 3.8592 82.339 0.0 0.0 0.0 12.004284481638225 54.66045440986423 12.004284481638225 9.01390202114048 0 0.5 0.8860566476931632 0.0 1.1237125054200234 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[KA]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[TV]|[{I|L}S]}QN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]EEQN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEED[WH]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM]WWEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.8592;3.3864;3.3864;3.3864;3.3864;3.3494;3.2571;3.2571;3.1019;3.0765 -;-;-;-;-;-;-;-;-;- 648 1 2.376 51261.3 1.0 2261 4106 6366 SUDHL4_400M_050219_1,6369 SUDHL4_400M_050219_1,6369, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6370 33.379 505.0 215470.0 25 0 9556.7 + 29863 QQVESRWGY 9 131 576.7758299141929 1151.5371068951856 2 576.7753173708916 MULTI CID FTMS 0 0 0 6366 113561.8515625 0.7463474667787221 -5 0.1026535034179687 4 Unmodified _QQVESRWGY_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;ENST00000559652.5_1_15:83697473-83710507:-|nuORF;ENST00000560015.1_1_15:83698515-83710507:-|nuORF;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;ENST00000592895.5_1_19:1987398-1987842:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1;nc|ENSG00000133243|Q9BX70-2|BTBD2 32.78568957990786 0.1150597335874693 5 QQVESRWGY 9 0 + 43.507 0.0 0.0 3.7782 3.7782 77.781 0.0 0.0 0.0 7.84263996774937 7.84263996774937 7.84263996774937 3.187587626244124 0 0.805462187404089 0.5376020021010439 0.4247425010840047 0.0 + + QQVESRWGY;QQVES{[QD]|[EN]|[WG]|[KD]|[RS]}RY;[HT][WR]SEV[HT];[HT]{[DA]|[EG]}RSEV[HT];[HT]V{[QD]|[EN]|[WG]|[KD]|[RS]}SEV[HT];QQVESRM{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[HT][WR]S[R{M(Oxidation (M))|F}]Y;[H{I|L}]S{[QD]|[EN]|[WG]|[KD]|[RS]}SEV[HT];[HT]{[DA]|[EG]}RS[R{M(Oxidation (M))|F}]Y;[HT]V{[QD]|[EN]|[WG]|[KD]|[RS]}S[R{M(Oxidation (M))|F}]Y 3.7782;3.5014;3.0971;2.9886;2.9305;2.7802;2.2693;2.1706;2.1561;2.098 +;-;-;-;-;-;-;-;-;- + 258 + 1 2.376 88853.0 1.0 2262 4106 6366 SUDHL4_400M_050219_1,6370 SUDHL4_400M_050219_1,6370,QQVESRWGY True True QQVESRWGY 33.379307 576.775317370892 778480.4375 6366.0 ENST00000559652.5_1_15:83697473-83710507:-|nuORF;;nc|ENSG00000133243|Q9BX70-2|BTBD2;;nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1;;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;;ENST00000560015.1_1_15:83698515-83710507:-|nuORF;;ENST00000592895.5_1_19:1987398-1987842:-|nuORF;;ENSG00000133243|ENST00000255608|BTBD2 5.622560183207194 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6373 33.389 168.0 336720.0 25 0 57973.0 + 10307 FSDENVRAI 9 88 525.765473159698 1049.516393386196 2 525.7642700076103 MULTI CID FTMS 0 0 0 6372 163183.34375 0.7156658054337166 -4 0.07525634765625 1 Unmodified _FSDENVRAI_ ENSG00000105851|ENST00000496166|PIK3CG 38.17557092003332 0.0854718145212029 5 VNEDSE 6 8 53.549 0.0 0.0 5.1023 0.0 0.0 358.229784080275 0.0 358.229784080275 0.0 42.58024070117017 0.0 0.0 0 0.7614393726401688 0.0 0.805462187404089 0.0 VNEDSE 5.1023 - 105 1 2.376 48504.3 1.0 2263 4108 6372 SUDHL4_400M_050219_1,6373 SUDHL4_400M_050219_1,6373,FSDENVRAI True True FSDENVRAI 33.389177 525.76427000761 1130722.75 6372.0 ENSG00000105851|ENST00000496166|PIK3CG 6.307440121968587 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6374 33.391 91.0 582410.0 25 0 113230.0 -1 0 69 517.2857590353916 516.2784825687916 1 517.2856323122978 MULTI CID FTMS 0 0 0 6372 659278.875 0.1051906751772846 14 -0.30560302734375 2 5 V 1 -1 10.969 0.0 0.0 2.1246 0.0 0.0 399.1992569601962 0.0 399.1992569601962 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.1246 - 5 + 1 2.376 46979.0 1.0 2264 4108 6372 SUDHL4_400M_050219_1,6374 SUDHL4_400M_050219_1,6374, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6375 33.398 369.0 281280.0 25 0 23404.0 + 45159 YQFTGIKKY 9 113 574.3103384364985 1146.6061239397968 2 574.3098022341728 MULTI CID FTMS 0 0 0 6372 94282.1171875 0.2814715302608966 -7 0.1340827941894531 3 Unmodified _YQFTGIKKY_ ENSG00000173915|ENST00000369815|ATP5MK 32.037481411007896 0.1235546156350648 5 [YQ]{M(Oxidation (M))|F}T{[VA]|[{I|L}G]}KKY 9 0 + 31.198 0.0 0.0 2.7209 2.7209 84.979 0.0 0.0 0.0 14.286954776218137 10.123337350737248 10.123337350737248 31.19817987694573 0 0.7887254899964358 0.0 0.0 0.0 + + [YQ]{M(Oxidation (M))|F}T{[VA]|[{I|L}G]}KKY 2.7209 + + 78 + 1 2.376 82728.3 1.0 2265 4108 6372 SUDHL4_400M_050219_1,6375 SUDHL4_400M_050219_1,6375,YQFTGIKKY True True YQFTGIKKY 33.397832 574.309802234173 3248279.75 6372.0 ENSG00000173915|ENST00000369815|ATP5MK 5.886138757069905 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6376 33.399 61.0 892120.0 25 0 122240.0 20343 LLFLWMYV 8 73 542.7990544808678 1083.5835560285354 2 543.3011962771416 MULTI CID FTMS 0 0 0 6372 601442.75 0.9216760354733468 -2 0.0314292907714843 4 Unmodified _LLFLWMYV_ nc|ENSG00000262085|Q8NH06|OR1P1 7.910154910731844 0.7763180056447161 5 {I|L}{I|L}[WK]N 5 5 16.254 0.0 0.0 1.5 0.0 0.0 0.0 426.1872347467407 426.1872347467407 14.471282898735163 0.0 0.0 0.0 0 0.4247425010840047 1.154901959985743 0.0 0.0 {I|L}{I|L}[WK]N 1.5 - 11 + 1 2.376 48344.0 1.0 2266 4108 6372 SUDHL4_400M_050219_1,6376 SUDHL4_400M_050219_1,6376,LLFLWMYV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 6379 33.413 389.0 265820.0 25 0 29842.0 + 37425 TLDDKKVYL 9 144 547.8082987387686 1093.602044544337 2 547.8080932497978 MULTI CID FTMS 0 0 0 6378 145843.703125 0.5534843732229227 -5 0.0845260620117187 1 Unmodified _TLDDKKVYL_ ENSG00000125633|ENST00000376300|CCDC93;ENST00000466171.1_1_2:118694276-118701638:-|nuORF 55.50274090549119 0.0285720310785888 5 T{I|L}DN 4 6 57.509 0.0 0.0 5.2587 0.0 0.0 0.0 647.3643892877561 647.3643892877561 36.35062553809596 0.0 0.0 0.0 0 0.9545391030138068 2.0 0.3807196863200844 0.0 T{I|L}DN 5.2587 - 1126 + 1 2.376 83917.4 1.0 2267 4110 6378 SUDHL4_400M_050219_1,6379 SUDHL4_400M_050219_1,6379,TLDDKKVYL True True TLDDKKVYL 33.412729 547.808093249798 1363406.0 6378.0 ENST00000466171.1_1_2:118694276-118701638:-|nuORF;;ENSG00000125633|ENST00000376300|CCDC93 4.375587463378906 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6380 33.417 199.0 320120.0 25 0 46071.0 + 33221 SFLRKPSY 8 97 499.2764085750776 0 499.2766296267509 PEAK CID FTMS 0 0 0 6378 110806.6484375 0.4327761056893596 -11 0.1686515808105468 2 Unmodified _SFLRKPSY_ REV__ENSG00000149380|ENST00000331597|P4HA3;REV__ENST00000525968.1_1_11:73984627-74015361:-|nuORF;REV__nc|ENSG00000149380|Q7Z4N8-2|P4HA3;REV__nc|ENSG00000149380|Q7Z4N8-3|P4HA3 5.760428011301431 0.5786759180849727 5 K 1 -1 5.4846 0.0 0.0 0.55036 0.0 0.0 780.3906944921489 85.0300768487914 865.4207713409403 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.55036 + + 13 + 1 2.376 53698.2 1.0 2268 4110 6378 SUDHL4_400M_050219_1,6380 SUDHL4_400M_050219_1,6380,SFLRKPSY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6381 33.42 183.0 316980.0 25 0 23782.0 + 37672 TLMRPNSQL 9 112 530.2850667965685 1058.5555806599368 2 530.2814208865166 MULTI CID FTMS 0 0 0 6378 148519.046875 0.7210464240031544 -4 0.0512962341308593 3 Unmodified _TLMRPNSQL_ REV__ENSG00000168488|ENST00000336783|ATXN2L;REV__ENST00000563314.5_1_16:28834580-28846939:+|nuORF;REV__nc|ENSG00000168488|Q8WWM7-2|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-3|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-4|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-5|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-6|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-8|ATXN2L;REV__nc|ENSG00000168488|Q8WWM7-9|ATXN2L 20.453626601364224 0.2830276176381075 5 [{I|L}T]QEG 5 -1 49.01 0.0 0.0 4.6299 0.0 0.0 0.0 527.2921236627561 527.2921236627561 26.066147098514705 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3252574989159953 0.4247425010840047 [{I|L}T]QEG 4.6299 - 345 + 1 2.376 51637.7 1.0 2269 4110 6378 SUDHL4_400M_050219_1,6381 SUDHL4_400M_050219_1,6381,TLMRPNSQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6384 33.43 159.0 322700.0 25 0 34099.0 + 9672 FLQEHNTTL 9 88 551.7799948399602 1101.5454367467205 2 551.7803832888603 MULTI CID FTMS 0 0 0 6383 241415.3125 0.2947132000768476 -5 0.0446128845214843 1 Unmodified _FLQEHNTTL_ ENSG00000015133|ENST00000389857|CCDC88C 49.93300154707207 0.0405168250806675 5 T{I|L} 2 7 20.049 0.0 0.0 1.8201 0.0 0.0 869.4025972465234 0.0 869.4025972465234 0.0 8.98780322035236 0.0 0.0 0 0.3494850021680094 0.0 0.2742275032520141 0.0 + T{I|L} 1.8201 + + 90 + 1 2.376 44608.4 1.0 2270 4112 6383 SUDHL4_400M_050219_1,6384 SUDHL4_400M_050219_1,6384,FLQEHNTTL True True FLQEHNTTL 33.429617 551.78038328886 4269267.0 6383.0 ENSG00000015133|ENST00000389857|CCDC88C 5.000536521275838 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6385 33.436 365.0 293230.0 25 0 117380.0 -1 0 95 492.2615384224086 491.2542619558086 1 492.2622253298759 MULTI CID FTMS 0 0 0 6383 164179.625 0.9396508298217698 4 -0.0954513549804687 2 5 [RP]GY 4 -1 + 23.188 0.0 0.0 4.7201 4.7201 89.106 0.0 0.0 0.0 3.723637474483468 12.59165558764808 3.723637474483468 23.187587626244124 0 0.0 0.0 0.0 0.0 [RP]GY 4.7201 - 14 + 1 2.376 90420.9 1.0 2271 4112 6383 SUDHL4_400M_050219_1,6385 SUDHL4_400M_050219_1,6385, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6386 33.45 800.0 263580.0 25 0 161670.0 + -1 RTFDETVSTY 10 110 609.3092251471857 608.3019486805856 1 609.3099853396416 MULTI CID FTMS 0 0 0 6383 125957.3046875 0.1156169310349891 -1 0.0038337707519531 3 ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 5 TY 2 -1 15.573 0.0 0.0 2.5601 0.0 0.0 326.18013579171685 0.0 326.18013579171685 0.0 4.124304553198922 0.0 0.0 0 0.0 0.0 0.0 0.0 TY 2.5601 - 34 + 1 2.376 155789.9 0.7799999713897705 2272 4112 6383 SUDHL4_400M_050219_1,6386 SUDHL4_400M_050219_1,6386, False False RTFDETVSTY 33.45001 609.309985339642 333070.5625 6383.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 2.8835674126942954 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6387 33.453 140.0 298210.0 25 0 20886.0 + 11181 GELTGEVRM 9 82 496.24752004369657 990.4804871541932 2 496.2482482790947 MULTI CID FTMS 0 0 0 6383 104561.7734375 0.1112827138031501 -7 0.105255126953125 4 Unmodified _GELTGEVRM_ ENSG00000128591|ENST00000325888|FLNC;nc|ENSG00000128591|Q14315-2|FLNC 14.40537977576856 0.4467465336100671 5 {[DA]|[EG]}{I|L}TGEP 7 3 42.98 0.0 0.0 4.3393 0.0 0.0 0.0 304.13996301822505 304.13996301822505 22.011226655685405 0.0 0.0 0.0 0 0.7742275032520141 1.0457574905606752 0.0 0.0 {[DA]|[EG]}{I|L}TGEP 4.3393 - 90 + 1 2.376 39061.1 1.0 2273 4112 6383 SUDHL4_400M_050219_1,6387 SUDHL4_400M_050219_1,6387,GELTGEVRM False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6389 33.467 690.0 190060.0 25 0 15387.0 + 17141 KLIDDVHRL 9 119 554.8276470541691 1107.640741175138 2 554.8281127810478 MULTI CID FTMS 0 0 0 6388 88830.9765625 0.6980447026492556 -2 0.0327301025390625 1 Unmodified _KLIDDVHRL_ ENSG00000182934|ENST00000332118|SRPRA;ENST00000528744.5_1_11:126137442-126138699:-|nuORF;nc|ENSG00000182934|P08240-2|SRPRA 57.24910588100465 0.0276051374632116 5 K{I|L}{I|L}DDVHR{I|L} 9 0 + 87.971 0.0 0.0 7.9422 7.9422 85.216 0.0 0.0 0.0 8.010299956639813 0.7572071393811655 0.7572071393811655 0.7572071393811655 0 1.9916440611282624 0.721246399047171 0.3252574989159953 0.6989700043360187 + + K{I|L}{I|L}DDVHR{I|L};K{I|L}{I|L}DDVH{I|L}R;{I|L}K{I|L}DDVHR{I|L};{I|L}K{I|L}DDVH{I|L}R;K{I|L}{I|L}{[CP]|[EA]}EHR{I|L};K{I|L}{I|L}{[CP]|[EA]}EH{I|L}R;{I|L}K{I|L}{[CP]|[EA]}EHR{I|L};{I|L}K{I|L}{[CP]|[EA]}EH{I|L}R;K{I|L}{I|L}DVV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F};K{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[{M(Oxidation (M))|F}T]R{I|L} 7.9422;7.8739;7.219;7.1507;6.4159;6.3476;5.6927;5.6244;4.8856;4.3177 +;-;-;-;-;-;-;-;-;- + 373 + 1 2.376 103478.9 1.0 2274 4113 6388 SUDHL4_400M_050219_1,6389 SUDHL4_400M_050219_1,6389,KLIDDVHRL True True KLIDDVHRL 33.467362 554.828112781048 605105.75 6388.0 nc|ENSG00000182934|P08240-2|SRPRA;;ENSG00000182934|ENST00000332118|SRPRA;;ENST00000528744.5_1_11:126137442-126138699:-|nuORF 6.631874402364095 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6390 33.481 800.0 156480.0 25 0 15030.0 -1 0 132 618.3698613146378 617.3625848480377 1 618.3710204958916 MULTI CID FTMS 0 0 0 6388 103058.890625 0.6729321812417972 -2 0.0327301025390625 2 5 {[CP]|[EA]}{I|L}M 4 -1 17.133 0.0 0.0 2.7752 0.0 0.0 0.0 170.13862179555647 170.13862179555647 6.952064649933767 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2396518287104437 0.0 {[CP]|[EA]}{I|L}M 2.7752 - 104 1 2.376 95443.8 0.5899999737739563 2275 4113 6388 SUDHL4_400M_050219_1,6390 SUDHL4_400M_050219_1,6390, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6391 33.495 800.0 151060.0 25 0 19214.0 3556 CYGRYWSYGFY 11 127 732.8048168598534 1463.5950807865067 2 732.8076049685478 MULTI CID FTMS 0 0 0 6388 78972.3984375 0.2974272437359561 -6 0.0735092163085937 3 Unmodified _CYGRYWSYGFY_ ENSG00000244624|ENST00000334664|KRTAP20-1 12.240655878213236 0.7805268987462184 5 DEAQQDA{M(Oxidation (M))|F}Y 9 9 75.143 0.0 0.0 5.1341 0.0 0.0 378.1645680158219 0.0 378.1645680158219 0.0 57.42579243406173 0.0 0.0 0 1.1989700043360187 0.0 0.6237125054200234 1.2302046884880935 DEAQQDA{M(Oxidation (M))|F}Y 5.1341 - 1865 1 2.376 88039.0 0.5099999904632568 2276 4113 6388 SUDHL4_400M_050219_1,6391 SUDHL4_400M_050219_1,6391,CYGRYWSYGFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6394 33.504 57.0 1431800.0 25 0 235180.0 + 25677 NGKTSKPA 8 66 401.7237949963452 801.4330370594904 2 401.7233154177666 MULTI CID FTMS 0 0 0 6393 838651.0625 0.401988231080268 -4 0.0789375305175781 1 Unmodified _NGKTSKPA_ REV__ENSG00000163629|ENST00000411767|PTPN13;REV__nc|ENSG00000163629|Q12923-2|PTPN13;REV__nc|ENSG00000163629|Q12923-3|PTPN13;REV__nc|ENSG00000163629|Q12923-4|PTPN13 2.059750862983233 0.8118298629782807 5 T 1 -1 5.4846 0.0 0.0 0.68434 0.0 0.0 401.22394389718414 296.1320894830688 697.3560333802529 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.68434 + + 5 + 1 2.387 68539.3 1.0 2277 4115 6393 SUDHL4_400M_050219_1,6394 SUDHL4_400M_050219_1,6394,NGKTSKPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6395 33.506 80.0 603700.0 25 0 118960.0 + 14794 ILDQKINEV 9 88 536.3057712066559 1070.5969894801117 2 536.3058959841728 MULTI CID FTMS 0 0 0 6393 554489.9375 0.0283119471283556 18 -0.6439208984375 2 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 49.55428908609986 0.0413471690215031 5 {I|L}{I|L}DQ 4 5 62.652 0.0 0.0 5.852 0.0 0.0 0.0 598.3208712213499 598.3208712213499 24.23696529319748 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.805462187404089 + {I|L}{I|L}DQ 5.852 + + 582 + 1 2.387 44335.8 1.0 2278 4115 6393 SUDHL4_400M_050219_1,6395 SUDHL4_400M_050219_1,6395,ILDQKINEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6396 33.509 160.0 449550.0 25 0 57361.0 + 11663 GLDPARVNV 9 87 470.7648668702091 939.5151808072184 2 470.7645141482353 MULTI CID FTMS 0 0 0 6393 275613.8125 0.326213840298602 -5 0.0958328247070312 3 Unmodified _GLDPARVNV_ ENSG00000146701|ENST00000315758|MDH2;ENST00000424167.2_1_7:75689738-75694307:+|nuORF;nc|ENSG00000146701|P40926-2|MDH2 30.63653989081413 0.1413794767160703 5 {[VA]|[{I|L}G]}DPA{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q 9 3 + 48.407 0.0 0.0 5.1523 5.1523 82.48 0.0 0.0 0.0 34.427346590861134 0.8315904224961201 0.8315904224961201 3.881801713828814 0 0.9247425010840048 2.0 0.0 0.3807196863200844 {[VA]|[{I|L}G]}DPA{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Q;{[VA]|[{I|L}G]}DPA[RV]NV;{[VA]|[{I|L}G]}DPA{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}GA;{[VA]|[{I|L}G]}DPRV{[{M(Oxidation (M))|F}H]|[RQ]};{[VA]|[{I|L}G]}D[{I|L}A][PA]{[{M(Oxidation (M))|F}H]|[RQ]};{[VA]|[{I|L}G]}DPA{[QV]|[N{I|L}]|[RA]|[KV]}AAV;{[VA]|[{I|L}G]}DPA[RV]GGV;{[VA]|[{I|L}G]}DPA[RV]AAA;{[VA]|[{I|L}G]}PDRV{[{M(Oxidation (M))|F}H]|[RQ]};{NN|[MP]|[D{I|L}]|[EV]}G[{I|L}A][PA]{[{M(Oxidation (M))|F}H]|[RQ]} 5.1523;4.7391;4.6989;4.1329;3.8775;3.8518;3.759;3.6748;2.7725;2.3555 -;+;-;-;-;-;-;-;-;- + 282 + 1 2.387 59168.1 1.0 2279 4115 6393 SUDHL4_400M_050219_1,6396 SUDHL4_400M_050219_1,6396,GLDPARVNV False True GLDPARVNV 33.508791 470.764514148235 9372008.0 6393.0 nc|ENSG00000146701|P40926-2|MDH2;;ENSG00000146701|ENST00000315758|MDH2;;ENST00000424167.2_1_7:75689738-75694307:+|nuORF 6.199184417724609 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6397 33.514 302.0 282990.0 25 0 32439.0 + 43591 YAEMGTRTF 9 99 538.2476082017206 1074.480663470241 2 538.2480346560478 MULTI CID FTMS 0 0 0 6393 203320.890625 0.9481495379674064 -3 0.075103759765625 4 Unmodified _YAEMGTRTF_ ENSG00000102595|ENST00000376747|UGGT2;ENST00000467305.1_1_13:96637506-96665674:-|nuORF;nc|ENSG00000102595|Q9NYU1-2|UGGT2 49.55428908609986 0.0413471690215031 5 YAEMGT 6 3 77.211 0.0 0.0 7.1859 0.0 0.0 0.0 419.20469080142817 419.20469080142817 61.57644705515452 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.079689690656103 0.0 + YAEMGT 7.1859 + + 426 + 1 2.387 70172.7 1.0 2280 4115 6393 SUDHL4_400M_050219_1,6397 SUDHL4_400M_050219_1,6397,YAEMGTRTF True True YAEMGTRTF 33.514329 538.2483 1205163.125 6393.0 nc|ENSG00000102595|Q9NYU1-2|UGGT2;;ENSG00000102595|ENST00000376747|UGGT2;;ENST00000467305.1_1_13:96637506-96665674:-|nuORF 5.08488114674886 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6398 33.519 273.0 341360.0 25 0 20272.0 + 17308 KLSEPSSLQY 10 124 576.3008820514243 1150.5872111696483 2 576.3013793826103 MULTI CID FTMS 0 0 0 6393 197297.5625 0.811177468784359 -1 0.0040016174316406 5 Unmodified _KLSEPSSLQY_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 37.07464296494664 0.1884581770199685 5 {[TV]|[{I|L}S]}KE[PS]S{I|L}QY 10 2 + 58.294 0.0 0.0 5.0665 5.0665 78.12 0.0 0.0 0.0 0.5551732784983088 16.53212513775344 0.5551732784983088 0.5551732784983088 0 0.8252574989159953 0.958607314841775 1.1861818737241734 0.0 {[TV]|[{I|L}S]}KE[PS]S{I|L}QY;{NN|[MP]|[D{I|L}]|[EV]}KT[PS]S{I|L}QY;{NN|[MP]|[D{I|L}]|[EV]}KT[RD]{I|L}QY;{[TV]|[{I|L}S]}KE[PS]S{I|L}[AG]Y;{NN|[MP]|[D{I|L}]|[EV]}KT[PS]S{I|L}[AG]Y;{[TV]|[{I|L}S]}[VG]T[PS]S{I|L}QY;{NN|[MP]|[D{I|L}]|[EV]}K{[RE]|[WV]}S{I|L}QY;[K{I|L}]SE[PS]S{I|L}QY;{NN|[MP]|[D{I|L}]|[EV]}KT[RD]{I|L}[AG]Y;[K{I|L}]DT[PS]S{I|L}QY 5.0665;5.0182;4.7121;4.27;4.2217;4.1857;4.1196;3.9717;3.9118;3.8875 -;-;-;-;-;-;-;+;-;- + 710 1 2.387 76344.1 1.0 2281 4115 6393 SUDHL4_400M_050219_1,6398 SUDHL4_400M_050219_1,6398,KLSEPSSLQY False True KLSEPSSLQY 33.519377 576.3021 1289478.875 6393.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 4.695246299107869 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6400 33.531 491.0 214790.0 25 0 11404.0 + 1495 ALGQTQPKVT 10 141 521.798275369951 1041.581997806702 2 521.7987548708916 MULTI CID FTMS 0 0 0 6399 76065.6328125 0.3289603833946989 6 -0.1695556640625 1 Unmodified _ALGQTQPKVT_ REV__ENSG00000176105|ENST00000314574|YES1 24.020572477871973 0.4289996903560794 5 [Q{I|L}][QT]A[Q{I|L}]Q{I|L} 9 -1 + 25.357 0.0 0.0 2.4345 2.4345 74.956 0.0 0.0 0.0 3.0069540797091534 1.901348502619825 1.901348502619825 3.0069540797091534 0 0.7491348669726234 1.3010299956639813 0.3054621874040891 0.8209991640913001 [Q{I|L}][QT]A[Q{I|L}]Q{I|L};[{I|L}A]G[QT]A[Q{I|L}]Q{I|L};{[VA]|[{I|L}G]}A[QT]A[Q{I|L}]Q{I|L};[Q{I|L}]D[KG][Q{I|L}]Q{I|L};[{I|L}A]GD[KG][Q{I|L}]Q{I|L};{[VA]|[{I|L}G]}AD[KG][Q{I|L}]Q{I|L};[AG]{I|L}[QT]A[Q{I|L}]Q{I|L};[Q{I|L}][YV]{[QV]|[N{I|L}]|[RA]|[KV]}[RH];[{I|L}A]G[YV]{[QV]|[N{I|L}]|[RA]|[KV]}[RH];{[VA]|[{I|L}G]}A[YV]{[QV]|[N{I|L}]|[RA]|[KV]}[RH] 2.4345;2.1458;2.0376;1.6355;1.3468;1.2386;1.1706;0.999;0.70513;0.59692 -;-;-;-;-;-;-;-;-;- 835 1 2.387 89353.8 1.0 2282 4116 6399 SUDHL4_400M_050219_1,6400 SUDHL4_400M_050219_1,6400,ALGQTQPKVT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6401 33.533 112.0 679010.0 25 0 103570.0 + 45160 YQFTGIKKY 9 95 383.20880462813295 1146.604584484599 3 383.2089721560478 MULTI CID FTMS 0 0 0 6399 374809.875 1.0 0 0.0 2 Unmodified _YQFTGIKKY_ ENSG00000173915|ENST00000369815|ATP5MK 18.373094154950223 0.3393451798331396 5 T{[VA]|[{I|L}G]}KKY 6 3 20.635 0.0 0.0 1.7996 0.0 0.0 438.1863201796762 0.0 438.1863201796762 0.0 10.150312510170778 0.0 0.0 0 0.0 0.0 0.0 0.0 + T{[VA]|[{I|L}G]}KKY 1.7996 + + 46 + 1 2.387 65756.0 1.0 2283 4116 6399 SUDHL4_400M_050219_1,6401 SUDHL4_400M_050219_1,6401,YQFTGIKKY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6402 33.547 800.0 108950.0 25 0 7513.8 + 12117 GQIKTVYPASY 11 107 613.8253470451754 1225.6361411571506 2 613.8259765505791 MULTI CID FTMS 0 0 0 6399 113783.1640625 0.9814976914907588 -1 0.0203475952148437 3 Unmodified _GQIKTVYPASY_ ENSG00000167513|ENST00000301019|CDT1 75.5705956163825 0.0162609445057862 5 [AG]G{I|L}V[KT]Y[PA]SY 12 4 + 52.27 0.0 0.0 4.2647 4.2647 56.917 0.0 0.0 0.0 0.305262133963069 8.167814940068872 0.305262133963069 0.0 0 2.2134679910804405 0.744727494896694 1.079689690656103 0.0 [AG]G{I|L}V[KT]Y[PA]SY;[AG]G{I|L}K{[TV]|[{I|L}S]}Y[PA]SY;{[QG]|[NA]}{I|L}K{[TV]|[{I|L}S]}Y[PA]SY;{[QG]|[NA]}{I|L}V[KT]Y[PA]SY;[PA]S[K{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WSY;{[{M(Oxidation (M))|F}C]|[YS]}{I|L}K{I|L}{[QG]|[NA]}[PA]SY;[AG]G{I|L}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WSY;{[QG]|[NA]}{I|L}VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WSY;{[TV]|[{I|L}S]}YK{I|L}{[QG]|[NA]}[PA]SY;[PA][KT]V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}WSY 4.2647;4.2647;4.2398;4.2398;3.2777;3.1789;2.9939;2.9719;2.9333;2.5373 -;-;+;-;-;-;-;-;-;- + 448 1 2.387 70229.3 0.6000000238418579 2284 4116 6399 SUDHL4_400M_050219_1,6402 SUDHL4_400M_050219_1,6402,GQIKTVYPASY True True GQIKTVYPASY 33.546777 613.825976550579 616759.625 6399.0 ENSG00000167513|ENST00000301019|CDT1 5.639724095662435 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6404 33.554 153.0 472390.0 25 0 43212.0 + 45389 YTAPPGPRL 9 100 486.2702580571223 970.5259631810446 2 486.2691833376884 MULTI CID FTMS 0 0 0 6403 79362.953125 0.2634441211404505 12 -0.3931808471679687 1 Unmodified _YTAPPGPRL_ ENSG00000140398|ENST00000355059|NEIL1;ENST00000561643.5_1_15:75639698-75645080:+|nuORF;ENST00000564738.5_1_15:75641306-75646619:+|nuORF;ENST00000564951.1_1_15:75639698-75641681:+|nuORF 15.847184025352805 0.4077185912009129 5 [YT]AP 4 5 31.471 0.0 0.0 3.2427 0.0 0.0 0.0 535.2991452032531 535.2991452032531 11.25951216083255 0.0 0.0 0.0 0 0.3054621874040891 1.2218487496163564 0.0 0.0 + [YT]AP 3.2427 + + 105 + 1 2.399 58721.4 1.0 2285 4117 6403 SUDHL4_400M_050219_1,6404 SUDHL4_400M_050219_1,6404,YTAPPGPRL False True YTAPPGPRL 33.553683 486.269183337688 2654787.25 6403.0 ENST00000564951.1_1_15:75639698-75641681:+|nuORF;;ENST00000561643.5_1_15:75639698-75645080:+|nuORF;;ENSG00000140398|ENST00000355059|NEIL1;;ENST00000564738.5_1_15:75641306-75646619:+|nuORF 0.438234806060791 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6405 33.568 800.0 114940.0 25 0 14711.0 15060 IMDYEDFAYC 10 127 635.2415569014921 1268.468560869784 2 635.2420532107353 MULTI CID FTMS 0 0 0 6403 136077.5625 1.0 0 0.0 2 Unmodified _IMDYEDFAYC_ ENSG00000243811|ENST00000216099|APOBEC3D 7.910154910731844 0.6900473968920092 5 [VS]E{M(Oxidation (M))|F} 4 8 44.253 0.0 0.0 3.4887 0.0 0.0 0.0 803.2385958307249 803.2385958307249 19.5597718523608 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 [VS]E{M(Oxidation (M))|F} 3.4887 - 376 + 1 2.399 72845.7 0.6600000262260437 2286 4117 6403 SUDHL4_400M_050219_1,6405 SUDHL4_400M_050219_1,6405,IMDYEDFAYC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6406 33.573 297.0 212330.0 25 0 15511.0 + 29570 QLQSHHYM 8 107 522.2391002474412 1042.4636475616824 2 522.2392455935478 MULTI CID FTMS 0 0 0 6403 86272.078125 0.7246858480332866 -1 0.0273933410644531 3 Unmodified _QLQSHHYM_ REV__ENSG00000053371|ENST00000235835|AKR7A2;REV__ENSG00000162482|ENST00000361640|AKR7A3;REV__nc|ENSG00000211454|Q8NHP1|AKR7L 10.183394434864962 0.7604730176254005 5 EES 3 -1 18.293 0.0 0.0 1.7548 0.0 0.0 183.02373800022 511.3022554986937 694.3259934989137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.0 EES 1.7548 - 129 + 1 2.399 53725.7 1.0 2287 4117 6403 SUDHL4_400M_050219_1,6406 SUDHL4_400M_050219_1,6406,QLQSHHYM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6407 33.587 800.0 91690.0 25 0 5875.3 -1 0 100 918.4205074480134 1834.826461962827 2 918.4271118044852 MULTI CID FTMS 0 0 0 6403 95313.859375 0.0894752629361783 -13 0.2386970520019531 4 5 [NP]{I|L}NW{M(Oxidation (M))|F}Q[HV]N{I|L}D 12 -1 49.543 0.0 0.0 2.7001 0.0 0.0 0.0 354.1065882658142 354.1065882658142 27.415314452042487 0.0 0.0 0.0 0 1.3182503180159344 0.958607314841775 0.0 1.174742501084005 [NP]{I|L}NW{M(Oxidation (M))|F}Q[HV]N{I|L}D 2.7001 - 811 1 2.399 53962.7 0.5099999904632568 2288 4117 6403 SUDHL4_400M_050219_1,6407 SUDHL4_400M_050219_1,6407, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6409 33.592 150.0 527650.0 25 0 68772.0 + 15959 ITAPPSRVL 9 84 477.2927396543278 952.5709263754557 2 477.2927123904228 MULTI CID FTMS 0 0 0 6408 408126.5625 0.1204893250188021 35 -1.0351333618164062 1 Unmodified _ITAPPSRVL_ ENSG00000099194|ENST00000370355|SCD 29.84058131909904 0.1515068451768857 5 {I|L}TAPP 5 4 57.796 0.0 0.0 6.0674 0.0 0.0 0.0 470.2721956842407 470.2721956842407 39.09949635000076 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + {I|L}TAPP 6.0674 + + 82 + 1 2.399 67872.3 1.0 2289 4118 6408 SUDHL4_400M_050219_1,6409 SUDHL4_400M_050219_1,6409,ITAPPSRVL False True ITAPPSRVL 33.592291 477.292712390423 105151596.0 6408.0 ENSG00000099194|ENST00000370355|SCD 4.512036005655925 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6410 33.606 800.0 61596.0 25 0 2851.0 43535 WWWWIWWQWW 10 86 874.9045501847553 1747.7945474363105 2 875.4066039919853 MULTI CID FTMS 0 0 0 6408 58753.5625 0.366394644882318 7 -0.1993675231933593 2 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 5 [NP]{I|L}N[QA][QP]WD{I|L} 11 9 23.867 0.0 0.0 1.3655 0.0 0.0 0.0 468.1504794033605 468.1504794033605 6.520472574534232 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 [NP]{I|L}N[QA][QP]WD{I|L} 1.3655 - 363 1 2.399 40701.4 0.5400000214576721 2290 4118 6408 SUDHL4_400M_050219_1,6410 SUDHL4_400M_050219_1,6410,WWWWIWWQWW False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_1 6411 33.608 80.0 867020.0 25 0 194280.0 16518 KAPPGPAR 8 88 397.2370909723495 792.459629011499 2 397.2375060915947 MULTI CID FTMS 0 0 0 6408 629145.6875 0.7431681680517741 -2 0.0673942565917968 3 Unmodified _KAPPGPAR_ ENSG00000179588|ENST00000319555|ZFPM1 4.75600775471527 0.7954636275367004 5 {I|L}{I|L}HR 4 7 45.79 0.0 0.0 5.7782 0.0 0.0 255.12049616459583 0.0 255.12049616459583 0.0 24.820618910682484 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.5356668758921829 {I|L}{I|L}HR 5.7782 - 37 + 1 2.399 59246.4 1.0 2291 4118 6408 SUDHL4_400M_050219_1,6411 SUDHL4_400M_050219_1,6411,KAPPGPAR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6412 33.61 76.0 885220.0 25 0 75913.0 + 30793 RIFGTDSQY 9 102 543.7647150278675 1085.514877122535 2 543.7647582888603 MULTI CID FTMS 0 0 0 6408 474059.21875 0.3435801480417155 -3 0.0877418518066406 4 Unmodified _RIFGTDSQY_ ENSG00000052802|ENST00000261507|MSMO1;nc|ENSG00000052802|Q15800-2|MSMO1 60.07390631473393 0.0260411565414776 5 [R{I|L}]{M(Oxidation (M))|F}GTDSQY 9 0 + 86.635 0.0 0.0 7.981 7.981 94.192 0.0 0.0 0.0 17.86098023303616 68.43494710484904 17.86098023303616 9.208187539523747 0 0.805462187404089 1.2218487496163564 1.174742501084005 0.0 + + [R{I|L}]{M(Oxidation (M))|F}GTDSQY;[R{I|L}]{M(Oxidation (M))|F}GTDS[AG]Y;[R{I|L}]{M(Oxidation (M))|F}GT[NS]EY 7.981;7.1327;5.2144 +;-;- + 139 1 2.399 58035.2 1.0 2292 4118 6408 SUDHL4_400M_050219_1,6412 SUDHL4_400M_050219_1,6412,RIFGTDSQY True True RIFGTDSQY 33.609716 543.76475828886 13001662.0 6408.0 ENSG00000052802|ENST00000261507|MSMO1;;nc|ENSG00000052802|Q15800-2|MSMO1 8.160251140594482 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6413 33.617 394.0 417630.0 25 0 53046.0 -1 0 121 406.7893888369887 811.5642247407774 2 406.7894164919853 MULTI CID FTMS 0 0 0 6408 191637.234375 0.1976794551822364 -6 0.1628456115722656 5 5 {I|L}G{I|L}K[R{I|L}]{I|L} 7 -1 + 42.906 0.0 0.0 5.2868 5.2868 91.675 0.0 0.0 0.0 26.66904917680132 4.374180157718364 4.374180157718364 42.90617423100155 0 0.8539171939081173 0.0 0.0 0.3054621874040891 {I|L}G{I|L}K[R{I|L}]{I|L} 5.2868 - 41 + 1 2.399 131274.1 1.0 2293 4118 6408 SUDHL4_400M_050219_1,6413 SUDHL4_400M_050219_1,6413, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6415 33.622 124.0 425390.0 25 0 61480.0 1966 AMTKDNNLL 9 102 510.2634175845958 1018.5122822359916 2 510.2636291384697 MULTI CID FTMS 0 0 0 6414 278873.28125 0.6931088601589889 -3 0.0973396301269531 1 Unmodified _AMTKDNNLL_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;nc|ENSG00000109971|P11142-2|HSPA8;nc|ENSG00000204389|P0DMV8-2|HSPA1A 37.97399986684836 0.0865783450051559 5 {[DS]|[MA]|[CV]|TT}T 3 6 20.673 0.0 0.0 2.0297 0.0 0.0 0.0 712.3651014100728 712.3651014100728 -0.0269751594335332 0.0 -0.0269751594335332 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 + {[DS]|[MA]|[CV]|TT}T 2.0297 + + 270 1 2.399 44222.6 1.0 2294 4119 6414 SUDHL4_400M_050219_1,6415 SUDHL4_400M_050219_1,6415,AMTKDNNLL True True YCAEIAHNV 33.621811 510.26362913847 444552.625 6414.0 ENSG00000144713|ENST00000429711|RPL32;;ENST00000458542.1_1_3:25791186-25791384:+|nuORF 3.315972328186035 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6416 33.636 800.0 119430.0 25 0 10380.0 -1 0 88 954.4318364201062 1906.849119907012 2 954.4302856326104 MULTI CID FTMS 0 0 0 6414 136761.484375 0.8005877862441811 2 -0.0616264343261718 2 5 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 74.612 0.0 0.0 3.9128 3.9128 82.471 0.0 0.0 0.0 3.4336777395950264 47.57328440288521 3.4336777395950264 8.992435370573588 0 0.8494850021680094 0.0 0.4247425010840047 1.1549471895720984 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQ[HV]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}[YG];[NP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQ[HV]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YG];[NP]{I|L}N{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}[H{I|L}]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.9128;3.4412;3.4401;3.4401;3.4401;3.4401;3.1767;3.1001;3.0188;2.9041 -;-;-;-;-;-;-;-;-;- 1238 1 2.399 70631.3 0.6299999952316284 2295 4119 6414 SUDHL4_400M_050219_1,6416 SUDHL4_400M_050219_1,6416, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6417 33.638 123.0 676600.0 25 0 48220.0 + 30972 RLASLQSEV 9 103 501.782418190652 1001.550283448104 2 501.7807189822197 MULTI CID FTMS 0 0 0 6414 243287.65625 0.0292742013696761 -6 0.1638946533203125 3 Unmodified _RLASLQSEV_ ENST00000397281.6_1_7:150065961-150066789:+|nuORF;ENST00000487455.1_1_7:150065323-150066789:+|nuORF 36.506200033944 0.094635877243972 5 S{I|L}QSEV 6 3 52.626 0.0 0.0 5.2544 0.0 0.0 340.22349745918126 0.0 340.22349745918126 0.0 25.9176003468815 0.0 0.0 0 0.6747425010840047 0.0 0.9247425010840048 0.0 + S{I|L}QSEV 5.2544 + + 312 1 2.399 70999.4 1.0 2296 4119 6414 SUDHL4_400M_050219_1,6417 SUDHL4_400M_050219_1,6417,RLASLQSEV True True RLASLQSEV 33.638199 501.78071898222 68504688.0 6414.0 ENST00000487455.1_1_7:150065323-150066789:+|nuORF;;ENST00000397281.6_1_7:150065961-150066789:+|nuORF 4.981733163197835 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6418 33.642 192.0 343030.0 25 0 55906.0 + 32683 HLPSDFTPA 9 83 492.7430266964337 983.4715004596674 2 492.7431518435478 MULTI CID FTMS 0 0 0 6414 170133.28125 0.5199694757245575 -5 0.1216888427734375 4 Unmodified _SDPFTHLAP_ P01966 26.88365393820708 0.1891292719743517 5 [VS]{I|L}HEMTAP 9 6 + 28.973 0.0 0.0 2.946 2.946 72.351 0.0 0.0 0.0 0.2857287980420189 0.2857287980420189 0.2857287980420189 0.2857287980420189 0 0.5 0.0 0.3494850021680094 0.0 [VS]{I|L}HEMTAP;[H{I|L}]{[QN]|[E{I|L}]|[KN]}{[CT]|[{M(Oxidation (M))|F}G]}T[PA];[VS]TMEH{I|L}[PA];[H{I|L}][C(Carbamidomethyl (C))H]H{I|L}[PA];[VS]{I|L}HD[WD]{I|L};{[CP]|[EA]}V[NP][VS]TAP 2.946;2.9169;2.7489;2.4508;2.1474;0.9696 -;-;-;-;-;- 98 + 1 2.399 55802.6 1.0 2297 4119 6414 SUDHL4_400M_050219_1,6418 SUDHL4_400M_050219_1,6418,SDPFTHLAP False False HLPSDFTPA 33.641876 492.743151843548 3502585.75 6414.0 P01966 3.347192962964376 2.0 False 9.0 True unknown PXD020620_cell_line SUDHL4_400M_050219_1 6419 33.656 800.0 216720.0 25 0 44823.0 -1 0 67 993.1047932815652 4960.487584074826 5 993.507373034954 MULTI CID FTMS 0 0 0 6414 75717.0234375 0.1233390086860537 -7 0.1927909851074218 5 5 AWK 3 -1 15.177 0.0 0.0 0.30596 0.0 0.0 4085.069628607833 487.1805513971313 4572.250180004964 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 AWK 0.30596 - 36 + 1 2.399 117702.8 0.4900000095367431 2298 4119 6414 SUDHL4_400M_050219_1,6419 SUDHL4_400M_050219_1,6419, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6421 33.661 72.0 695160.0 25 0 55033.0 + 44233 YLHSQVVSV 9 75 516.279871246128 1030.545189559056 2 516.2802001833916 MULTI CID FTMS 0 0 0 6420 412996.5625 0.3696077125152965 4 -0.0915184020996093 1 Unmodified _YLHSQVVSV_ ENSG00000204267|ENST00000374897|TAP2;nc|ENSG00000204267|Q03519-2|TAP2 30.63653989081413 0.1413794767160703 5 [VS]Q[WQ]VVSV 9 4 + 48.139 0.0 0.0 4.6712 4.6712 86.035 0.0 0.0 0.0 11.139305113795643 32.65417168842156 11.139305113795643 9.208187539523747 0 0.7742275032520141 1.6989700043360187 0.805462187404089 0.0 [VS]Q[WQ]VVSV;[VS][AG][WQ]VVSV;[VS]QH[Y{I|L}]VSV;{[QV]|[N{I|L}]|[RA]|[KV]}W{[QS]|[NT]}VVSV;{[QV]|[N{I|L}]|[RA]|[KV]}S[WQ]VVSV;[VS][AG]H[Y{I|L}]VSV;[VS]Q{[WT]|[RM]}[KP]SV;{[QV]|[N{I|L}]|[RA]|[KV]}W[WK]VW;{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))Q]{I|L}VVSV;{[QG]|[NA]}RR{[ET]|[MV]}VW 4.6712;3.7777;3.5467;3.0994;2.9285;2.6531;2.4823;2.3285;2.147;1.9181 -;-;-;-;-;-;-;-;-;- 237 1 2.394 43372.9 1.0 2299 4120 6420 SUDHL4_400M_050219_1,6421 SUDHL4_400M_050219_1,6421,YLHSQVVSV False True YLHSQVVSV 33.66107 516.280200183392 5338519.0 6420.0 nc|ENSG00000204267|Q03519-2|TAP2;;ENSG00000204267|ENST00000374897|TAP2 4.206419150034587 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6422 33.665 194.0 625790.0 25 0 66915.0 + 44205 YLGDVSERV 9 110 519.2665871480285 1036.518621362857 2 519.2670165896416 MULTI CID FTMS 0 0 0 6420 261306.03125 0.3747702559329187 -4 0.1361274719238281 2 Unmodified _YLGDVSERV_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 36.506200033944 0.094635877243972 5 Y{I|L}GDV 5 4 68.46 0.0 0.0 6.6048 0.0 0.0 0.0 486.2317742746641 486.2317742746641 55.98619869140633 0.0 0.0 0.0 0 0.6694451763165201 2.0 0.3807196863200844 0.0 + Y{I|L}GDV 6.6048 + + 200 + 1 2.394 95693.2 1.0 2300 4120 6420 SUDHL4_400M_050219_1,6422 SUDHL4_400M_050219_1,6422,YLGDVSERV True True YLGDVSERV 33.664811 519.267016589642 3278833.25 6420.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 4.525667667388916 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6423 33.679 800.0 176900.0 25 0 15167.0 + -1 NETKKERCEFY 11 115 752.3456939322062 1502.6768349312124 2 752.3461181521416 MULTI CID FTMS 0 0 0 6420 166065.5625 0.7478075423175766 -6 0.1604766845703125 3 Carbamidomethyl (C) _NETKKERC(Carbamidomethyl (C))EFY_ REV__ENSG00000105835|ENST00000222553|NAMPT;REV__ENST00000393618.5_1_7:105910735-105925330:-|nuORF;REV__ENST00000486949.5_1_7:105912936-105925330:-|nuORF;REV__ENST00000489358.5_1_7:105912543-105925330:-|nuORF;REV__ENST00000489732.1_1_7:105917445-105925330:-|nuORF 9.38312468134398 0.8308777417566128 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 79.391 0.0 0.0 5.2833 5.2833 82.911 0.0 0.0 0.0 3.828338941857723 10.62977812912628 3.828338941857723 3.828338941857723 0 0.8182503180159344 0.0 0.6861818737241735 1.274227503252014 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[YK]EAQQNA{M(Oxidation (M))|F}Y;[AG]E{I|L}YEAQQNA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEAQQGGA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEA[AG]QNA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[YK]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[YK]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[YK]EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YK]EAQQNA{M(Oxidation (M))|F}Y 5.2833;5.0285;4.8595;4.6778;4.6778;4.6778;4.4248;4.4248;4.4248;4.3975 -;-;-;-;-;-;-;-;-;- 1675 1 2.394 105209.5 0.7300000190734863 2301 4120 6420 SUDHL4_400M_050219_1,6423 SUDHL4_400M_050219_1,6423,NETKKERCEFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6425 33.685 224.0 327650.0 25 0 71632.0 + 22879 LSAVESHVR 9 88 499.2764085750776 0 499.2768127322197 PEAK CID FTMS 0 0 0 6424 256036.890625 1.0 0 0.0 1 Unmodified _LSAVESHVR_ REV__ENSG00000123130|ENST00000379303|ACOT9;REV__ENST00000379297.5_1_X:23722013-23724857:-|nuORF;REV__nc|ENSG00000123130|Q9Y305-2|ACOT9;REV__nc|ENSG00000123130|Q9Y305-3|ACOT9;REV__nc|ENSG00000123130|Q9Y305|ACOT9 7.910154910731844 0.3362437653303669 5 K 1 -1 4.6041 0.0 0.0 0.46201 0.0 0.0 780.3904961278911 85.03032861881093 865.420824746702 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.46201 - 8 + 1 2.394 65278.5 1.0 2302 4121 6424 SUDHL4_400M_050219_1,6425 SUDHL4_400M_050219_1,6425,LSAVESHVR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6426 33.689 221.0 324690.0 25 0 14651.0 + 13678 HQFLQNEY 8 101 539.751387754011 1077.488222574822 2 539.7515746951103 MULTI CID FTMS 0 0 0 6424 236609.875 0.1201843732168416 -5 0.158966064453125 2 Unmodified _HQFLQNEY_ ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1 34.10243960390752 0.3329570729325616 5 [AG]H{M(Oxidation (M))|F}{I|L}QNEY 9 3 + 64.28 0.0 0.0 5.9658 5.9658 82.92 0.0 0.0 0.0 2.1921290549096426 16.478174818886373 2.1921290549096426 2.1921290549096426 0 0.4247425010840047 1.2218487496163564 0.0 0.3807196863200844 [AG]H{M(Oxidation (M))|F}{I|L}QNEY;[HQ]{M(Oxidation (M))|F}{I|L}QNEY;[AG]H{M(Oxidation (M))|F}{I|L}[AG]NEY;[AG]H{M(Oxidation (M))|F}{I|L}QGGEY;[HQ]{M(Oxidation (M))|F}{I|L}[AG]NEY;[HQ]{M(Oxidation (M))|F}{I|L}QGGEY;[HQ]{M(Oxidation (M))|F}{I|L}[AG]GGEY;[AG]H{M(Oxidation (M))|F}{I|L}[AG]GGEY;[AG]H[NP][YK]EY;[HQ][NP][YK]EY 5.9658;5.7623;5.1112;5.1112;4.9027;4.9027;4.0481;3.9073;2.2598;2.0563 -;+;-;-;-;-;-;-;-;- + 289 1 2.394 57907.9 1.0 2303 4121 6424 SUDHL4_400M_050219_1,6426 SUDHL4_400M_050219_1,6426,HQFLQNEY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6428 33.695 197.0 532900.0 25 0 73737.0 + 15829 ISKALVAY 8 99 432.7632354724004 863.5119180116009 2 432.7631713747978 MULTI CID FTMS 0 0 0 6427 289700.5 0.1807179377293036 -5 0.1421623229980468 1 Unmodified _ISKALVAY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000339471.8_1_19:39923915-39924228:-|nuORF 24.020572477871973 0.5389365498350341 5 [{I|L}A]VKSA{I|L}Y 8 5 + 37.293 0.0 0.0 4.3187 4.3187 76.738 0.0 0.0 0.0 2.3127964821867764 10.526778562728154 2.3127964821867764 1.2763625255165325 0 0.5 0.7958800173440752 0.0 0.0 [{I|L}A]VKSA{I|L}Y;[{I|L}A]VKS{I|L}AY;{[TV]|[{I|L}S]}[KA]VA{I|L}Y;[{I|L}A]VKTG{I|L}Y;[{I|L}A][KS]VA{I|L}Y;{[TV]|[{I|L}S]}[KA]V{I|L}AY;[{I|L}A]VKTVAY;[{I|L}A][KS]V{I|L}AY;{[TV]|[{I|L}S]}[KA]{I|L}G{I|L}Y;[{I|L}A]VKTAVY 4.3187;4.1709;4.0509;3.9701;3.9465;3.9031;3.8223;3.7987;3.7023;3.6215 -;-;-;-;-;-;-;-;-;- 238 1 2.394 86624.8 1.0 2304 4122 6427 SUDHL4_400M_050219_1,6428 SUDHL4_400M_050219_1,6428,ISKALVAY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6429 33.699 210.0 318930.0 25 0 21191.0 43762 YEHDLEVAQ 9 111 552.2534233914255 1102.4922938496509 2 552.2538329958916 MULTI CID FTMS 0 0 0 6427 155921.609375 0.3841890405798873 -4 0.1021614074707031 2 Unmodified _YEHDLEVAQ_ ENSG00000132341|ENST00000543796|RAN;ENST00000413691.2_1_4:174554896-174555010:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 20.453626601364224 0.2830276176381075 5 {[YC]|[HE]}YD{I|L}EV[QA] 9 2 + 29.86 0.0 0.0 2.7084 2.7084 79.136 0.0 0.0 0.0 4.551368718728813 15.256303102940482 4.551368718728813 7.038914140011872 0 0.0 0.0 0.9559771852360796 0.0 {[YC]|[HE]}YD{I|L}EV[QA];[QA][{M(Oxidation (M))|F}V]{I|L}D[YT]{M(Oxidation (M))|F};{[YC]|[HE]}YD{I|L}[QA]EV;[HD][YE]{I|L}EV[QA];{[YC]|[HE]}YD[QA]{I|L}EV;[QA][{M(Oxidation (M))|F}V]Y{[{M(Oxidation (M))|F}D]|MM}T{I|L};[{M(Oxidation (M))|F}V][QA]{I|L}D[YT]{M(Oxidation (M))|F};[HD]{[QN]|[E{I|L}]|[KN]}YEV[QA];{[YC]|[HE]}{NN|[MP]|[D{I|L}]|[EV]}YEV[QA];{[YC]|[HE]}YD{I|L}{[NV]|[RG]}[DV] 2.7084;2.07;1.89;1.7598;1.5949;1.3542;1.2232;1.2137;1.1674;1.0072 -;-;-;-;-;-;-;-;-;- 192 1 2.394 58649.0 1.0 2305 4122 6427 SUDHL4_400M_050219_1,6429 SUDHL4_400M_050219_1,6429,YEHDLEVAQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6430 33.703 207.0 385000.0 25 0 27606.0 -1 LVSVDGYMNMQ 11 101 636.784096483505 1271.55364003381 2 636.7856933474541 MULTI CID FTMS 0 0 0 6427 214777.3125 0.7302631683802258 -3 0.0722160339355468 3 Oxidation (M) _LVSVDGYMNM(Oxidation (M))Q_ ENSG00000139343|ENST00000266735|SNRPF;ENST00000551316.1_1_12:96252749-96255077:+|nuORF 9.38312468134398 0.8308777417566128 5 [{I|L}V]DE{I|L}KNM 8 -1 35.047 0.0 0.0 2.7563 0.0 0.0 0.0 326.04635178601615 326.04635178601615 -0.3587621786350325 0.0 -0.3587621786350325 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]DE{I|L}KNM 2.7563 - 1791 1 2.394 66337.4 1.0 2306 4122 6427 SUDHL4_400M_050219_1,6430 SUDHL4_400M_050219_1,6430,LVSVDGYMNMQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6431 33.71 388.0 206670.0 25 0 44333.0 + -1 SNTQAERSIIG 11 101 609.3092251471857 608.3019486805856 1 609.3082153201103 MULTI CID FTMS 0 0 0 6427 198805.71875 0.1824849073351223 9 -0.385986328125 4 ENSG00000184330|ENST00000368729|S100A7A;ENSG00000143556|ENST00000368723|S100A7 5 VAAA 4 -1 33.981 0.0 0.0 5.5863 0.0 0.0 278.1097938556945 0.0 278.1097938556945 0.0 21.21709808927121 0.0 0.0 0 0.8063707585678626 0.0 0.0 0.0 VAAA 5.5863 - 143 1 2.394 62177.4 1.0 2307 4122 6427 SUDHL4_400M_050219_1,6431 SUDHL4_400M_050219_1,6431, False False SNTQAERSIIG 33.710157 609.30821532011 3304801.75 6427.0 ENSG00000184330|ENST00000368729|S100A7A;;ENSG00000143556|ENST00000368723|S100A7 0.3908207217852275 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6432 33.724 800.0 126680.0 25 0 18211.0 -1 0 100 650.6504060686418 1948.9293888061247 3 650.9832031130791 MULTI CID FTMS 0 0 0 6427 136794.78125 1.0 0 0.0 5 5 AEY 3 -1 35.445 0.0 0.0 1.8187 0.0 0.0 1567.7766279432487 0.0 1567.7766279432487 0.0 2.341284356197235 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 AEY 1.8187 - 270 1 2.394 82147.3 0.6899999976158142 2308 4122 6427 SUDHL4_400M_050219_1,6432 SUDHL4_400M_050219_1,6432, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6434 33.728 105.0 521520.0 25 0 64099.0 + 11182 GELTGEVRM 9 85 496.24752004369657 990.4804871541932 2 496.2473937869072 MULTI CID FTMS 0 0 0 6433 335112.875 0.3566529997950601 4 -0.1280670166015625 1 Unmodified _GELTGEVRM_ ENSG00000128591|ENST00000325888|FLNC;nc|ENSG00000128591|Q14315-2|FLNC 34.93206674587334 0.1032771302489716 5 {[DA]|[EG]}{I|L}TGEV{[WT]|[RM]} 9 0 + 69.587 0.0 0.0 7.0256 7.0256 90.452 0.0 0.0 0.0 56.823077659209 5.642492736872597 5.642492736872597 7.7815125038364386 0 1.424742501084005 1.6989700043360187 0.4247425010840047 0.0 + + {[DA]|[EG]}{I|L}TGEV{[WT]|[RM]};{[DA]|[EG]}{I|L}TGEV{[CA]|SS}{I|L};{[DA]|[EG]}{I|L}TGE{[WT]|[RM]}V;{[DA]|[EG]}{I|L}[VP][WQ]Y;W{I|L}[YQ]{[DA]|[EG]}PV;W{I|L}[YQ][DP]AV;W{I|L}[YQ][DP]G{I|L};W{I|L}[YQ][EP]GV;{[DA]|[EG]}{I|L}{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GV;{[CT]|[{M(Oxidation (M))|F}G]}[VP]GEV{[WT]|[RM]} 7.0256;6.24;6.0873;3.9995;3.6678;3.0599;2.8571;2.6164;2.3424;1.9788 +;-;-;-;-;-;-;-;-;- + 150 + 1 2.394 48145.8 1.0 2309 4123 6433 SUDHL4_400M_050219_1,6434 SUDHL4_400M_050219_1,6434,GELTGEVRM True True GELTGEVRM 33.728317 496.247393786907 8779300.0 6433.0 ENSG00000128591|ENST00000325888|FLNC;;nc|ENSG00000128591|Q14315-2|FLNC 4.365258117516835 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6435 33.742 800.0 127200.0 25 0 11882.0 + -1 QNRRHRFWCQ 10 134 744.364165324891 0 744.3660766482353 PEAK CID FTMS 0 0 0 6433 125326.4453125 1.0 0 0.0 2 Carbamidomethyl (C) _QNRRHRFWC(Carbamidomethyl (C))Q_ REV__ENSG00000139624|ENST00000317551|CERS5;REV__nc|ENSG00000139624|Q8N5B7-2|CERS5 13.90604991867851 0.345182617568752 5 N{I|L}NAD 5 -1 26.776 0.0 0.0 1.801 0.0 0.0 97.0563852236099 859.4103467491973 956.4667319728072 0.0 0.0 0.0 0.0 0 1.4124379954164592 0.0 0.0 0.0 N{I|L}NAD 1.801 - 390 + 1 2.394 75159.8 0.6299999952316284 2310 4123 6433 SUDHL4_400M_050219_1,6435 SUDHL4_400M_050219_1,6435,QNRRHRFWCQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6436 33.744 110.0 1277400.0 25 0 94826.0 + 14519 IGQIKRIL 8 127 470.8188041709331 939.6230554086662 2 470.8186218142509 MULTI CID FTMS 0 0 0 6433 549604.625 0.129047129042521 -5 0.1367530822753906 3 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 57.47134341890925 0.1146309765603773 5 {I|L}GQ{I|L}KR{I|L}{I|L} 8 -1 + 58.479 0.0 0.0 6.2237 6.2237 92.731 0.0 0.0 0.0 37.05259398656281 4.731975075880328 4.731975075880328 15.365071892553814 0 1.6039171939081172 1.6989700043360187 0.0 0.3054621874040891 {I|L}GQ{I|L}KR{I|L}{I|L};{[VA]|[{I|L}G]}Q{I|L}KR{I|L}{I|L};{[VA]|[{I|L}G]}[AG]{I|L}KR{I|L}{I|L};AA[VG]{I|L}KR{I|L}{I|L};[AG]{[VA]|[{I|L}G]}{I|L}KR{I|L}{I|L};{[NV]|[RG]}VVKR{I|L}{I|L} 6.2237;4.5885;2.9525;1.0413;0.29739;0.28117 +;+;-;-;-;- + 605 + 1 2.394 110973.0 1.0 2311 4123 6433 SUDHL4_400M_050219_1,6436 SUDHL4_400M_050219_1,6436,IGQIKRIL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6437 33.748 154.0 579770.0 25 0 67508.0 + 43754 YEDISRGL 8 87 476.740401652241 951.466250371282 2 476.7405273318291 MULTI CID FTMS 0 0 0 6433 291419.75 0.8990689740512273 -2 0.0451812744140625 4 Unmodified _YEDISRGL_ ENSG00000105369|ENST00000221972|CD79A;nc|ENSG00000105369|P11912-2|CD79A 21.53697664764585 0.591232569029014 5 YED{I|L}S 5 3 55.037 0.0 0.0 5.7845 0.0 0.0 0.0 341.1947420709594 341.1947420709594 27.85789402675583 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + YED{I|L}S 5.7845 + + 109 + 1 2.394 75073.6 1.0 2312 4123 6433 SUDHL4_400M_050219_1,6437 SUDHL4_400M_050219_1,6437,YEDISRGL False True YEDISRGL 33.747513 476.740527331829 1441683.625 6433.0 nc|ENSG00000105369|P11912-2|CD79A;;ENSG00000105369|ENST00000221972|CD79A 3.006773312886556 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6439 33.763 800.0 130690.0 25 0 16027.0 -1 ELCCRACVSFY 11 108 732.8048168598534 1463.5950807865067 2 732.8041259646416 MULTI CID FTMS 0 0 0 6438 95635.6875 0.3601848177174178 5 -0.1929283142089843 1 3 Carbamidomethyl (C) _ELC(Carbamidomethyl (C))C(Carbamidomethyl (C))RAC(Carbamidomethyl (C))VSFY_ ENSG00000161091|ENST00000355415|MFSD12;nc|ENSG00000161091|Q6NUT3-2|MFSD12;nc|ENSG00000161091|Q6NUT3-3|MFSD12;nc|ENSG00000161091|Q6NUT3-4|MFSD12 18.1463463914782 0.6576820063886638 5 DEAQQDA[Y{M(Oxidation (M))|F}] 9 -1 72.73 0.0 0.0 4.9693 0.0 0.0 378.1661549298844 0.0 378.1661549298844 0.0 55.74060497133898 0.0 0.0 0 0.8807196863200843 0.0 0.6382104921644451 1.2302046884880935 DEAQQDA[Y{M(Oxidation (M))|F}] 4.9693 - 812 1 2.394 76331.1 0.7200000286102295 2313 4124 6438 SUDHL4_400M_050219_1,6439 SUDHL4_400M_050219_1,6439,ELCCRACVSFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6440 33.765 83.0 649520.0 25 0 65295.0 + 9868 FPFHKVEI 8 74 508.7800175004863 1015.5454820677726 2 508.7803527712822 MULTI CID FTMS 0 0 0 6438 588222.3125 0.5310239924456984 -25 0.5124778747558594 2 Unmodified _FPFHKVEI_ REV__ENSG00000160716|ENST00000368476|CHRNB2 19.256988751693697 0.6264283240490721 5 RAGTPE 6 -1 47.384 0.0 0.0 4.6658 0.0 0.0 386.21602065254064 0.0 386.21602065254064 0.0 33.888662832205014 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 RAGTPE 4.6658 - 45 1 2.394 54419.6 1.0 2314 4124 6438 SUDHL4_400M_050219_1,6440 SUDHL4_400M_050219_1,6440,FPFHKVEI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6441 33.769 182.0 459060.0 25 0 33377.0 + 11456 GIFERTQTI 9 101 532.7896430035707 1063.5647330739414 2 532.7900268435478 MULTI CID FTMS 0 0 0 6438 317430.625 0.5526177118084635 -2 0.0580902099609375 3 Unmodified _GIFERTQTI_ REV__ENST00000528435.5_1_11:118175667-118182938:+|nuORF 25.399314129420983 0.2080152500878129 5 VA{M(Oxidation (M))|F}EDTKRV 9 -1 + 72.477 0.0 0.0 6.8145 6.8145 95.547 0.0 0.0 0.0 60.486867228035294 6.241535636908452 6.241535636908452 31.18607756686474 0 0.3494850021680094 1.6989700043360187 0.7614393726401688 0.0 VA{M(Oxidation (M))|F}EDTKRV;VA{M(Oxidation (M))|F}V[SG]{[ET]|[MV]}RV;VA{M(Oxidation (M))|F}GW{[ET]|[MV]}RV;VA{M(Oxidation (M))|F}V[SG][VS][W{I|L}];VA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DV]RV;VAV{M(Oxidation (M))|F}[SG][VS][W{I|L}];VAV[YQ]SV[W{I|L}];VAV{M(Oxidation (M))|F}[SG]{[ET]|[MV]}RV;VA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AV[W{I|L}];VAV[YQ]{[ET]|[MV]}RV 6.8145;3.8823;3.809;3.384;3.3666;3.2131;3.1812;2.9127;2.8096;2.5815 -;-;-;-;-;-;-;-;-;- 297 + 1 2.394 71530.2 1.0 2315 4124 6438 SUDHL4_400M_050219_1,6441 SUDHL4_400M_050219_1,6441,GIFERTQTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6442 33.773 215.0 254720.0 25 0 20824.0 8565 ETLQEVHR 8 99 506.2631408572197 0 506.2631408572197 PEAK CID FTMS 0 0 0 -1 0 4 Unmodified _ETLQEVHR_ ENSG00000205436|ENST00000688303|EXOC3L4;ENST00000560925.5_1_14:103571257-103576557:+|nuORF 8.593279151180031 0.5573742999696857 5 QK 2 7 7.0783 0.0 0.0 0.70047 0.0 0.0 377.1868312482438 374.1379793756469 751.3248106238907 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QK 0.70047 - 64 + 1 2.394 47846.0 1.0 2316 4124 6438 SUDHL4_400M_050219_1,6442 SUDHL4_400M_050219_1,6442,ETLQEVHR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6443 33.787 800.0 155160.0 25 0 11680.0 + -1 KCKETFEEHYF 11 112 759.3370857974699 1516.6596186617396 2 759.3401367068291 MULTI CID FTMS 0 0 0 6438 105725.578125 0.6575070238223528 -2 0.0580902099609375 5 Carbamidomethyl (C) _KC(Carbamidomethyl (C))KETFEEHYF_ REV__ENST00000551270.1_1_12:104283206-104309165:-|nuORF;REV__nc|ENSG00000214198|Q6P2S7-2|TTC41P;REV__nc|ENSG00000214198|Q6P2S7|TTC41P 5.296884461304476 0.8501568894076437 5 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 55.271 0.0 0.0 3.6443 0.0 0.0 432.2128163068375 0.0 432.2128163068375 0.0 39.786465885450966 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.8494850021680094 DEAQQNA{M(Oxidation (M))|F}Y 3.6443 - 1493 1 2.394 91211.9 0.699999988079071 2317 4124 6438 SUDHL4_400M_050219_1,6443 SUDHL4_400M_050219_1,6443,KCKETFEEHYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6445 33.791 81.0 890560.0 25 0 104980.0 38438 TRSGTALP 8 78 401.7237949963452 801.4330370594904 2 401.7233154177666 MULTI CID FTMS 0 0 0 6444 423135.25 0.2028202172047054 6 -0.2887802124023437 1 Unmodified _TRSGTALP_ ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF 2.577480529830294 0.808687252328423 5 Q 1 8 11.594 0.0 0.0 1.4466 0.0 0.0 655.3631803473795 0.0 655.3631803473795 0.0 7.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 1.4466 - 19 + 1 2.394 61511.9 1.0 2318 4125 6444 SUDHL4_400M_050219_1,6445 SUDHL4_400M_050219_1,6445,TRSGTALP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6446 33.797 362.0 258370.0 25 0 29397.0 + 14795 ILDQKINEV 9 131 536.3057712066559 1070.5969894801117 2 536.3066284060478 MULTI CID FTMS 0 0 0 6444 146301.25 0.0074700602746507 28 -0.8357658386230469 2 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 32.78568957990786 0.1150597335874693 5 {I|L}{I|L}DQ 4 5 57.722 0.0 0.0 5.3915 0.0 0.0 0.0 598.3229464166624 598.3229464166624 33.0769648832532 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3252574989159953 0.3494850021680094 + {I|L}{I|L}DQ 5.3915 + + 466 + 1 2.394 76343.7 1.0 2319 4125 6444 SUDHL4_400M_050219_1,6446 SUDHL4_400M_050219_1,6446,ILDQKINEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6448 33.804 143.0 476760.0 25 0 31879.0 + 12072 GQFPGHNEF 9 100 516.7305607301898 1031.4465685271796 2 516.7302734255791 MULTI CID FTMS 0 0 0 6447 199605.890625 0.2334915742340703 -14 0.3729743957519531 1 Unmodified _GQFPGHNEF_ ENSG00000163171|ENST00000295324|CDC42EP3 23.78978130925829 0.2284941198415988 5 {[QG]|[NA]}{M(Oxidation (M))|F}PS 5 5 27.483 0.0 0.0 2.6645 0.0 0.0 0.0 512.1900728815061 512.1900728815061 14.998952202259012 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.4247425010840047 0.0 {[QG]|[NA]}{M(Oxidation (M))|F}PS 2.6645 - 464 + 1 2.381 56617.7 1.0 2320 4126 6447 SUDHL4_400M_050219_1,6448 SUDHL4_400M_050219_1,6448,GQFPGHNEF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6449 33.809 272.0 366920.0 25 0 15928.0 + + 44111 NVIRDAVTY 9 140 525.7799601375198 1049.5453673418394 2 525.7805053591728 MULTI CID FTMS 0 0 0 6447 282246.59375 0.3975578858222157 -3 0.0733757019042968 2 Unmodified _YKVTYLTY_ ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000158406|ENST00000377727|H4C8;ENSG00000275126|ENST00000618305|H4C13;ENSG00000273542|ENST00000611927|H4C12;ENSG00000197061|ENST00000377803|H4C3;ENSG00000276966|ENST00000615164|H4C5;ENSG00000278637|ENST00000617569|H4C1;ENSG00000270882|ENST00000578186|H4C14;ENSG00000197238|ENST00000355057|H4C11;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276180|ENST00000615353|H4C9;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16 32.30548876998284 0.3644845974844379 5 [QA]AEV{I|L}RTY 9 -1 + 44.984 0.0 0.0 4.286 4.286 79.866 0.0 0.0 0.0 7.318536896552317 11.27279564132754 7.318536896552317 3.89461543016899 0 1.5682503180159344 0.638272163982407 0.6139829889124311 0.0 [QA]AEV{I|L}RTY;[QA][W{I|L}]{I|L}RTY;[QA]AEV{I|L}GVTY;{[NV]|[RG]}WV{I|L}RTY;[QA][W{I|L}]{I|L}GVTY;[QA][RN]{[VA]|[{I|L}G]}QTY;[QA]{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]VTY;{[NV]|[RG]}WV{I|L}GVTY;{[QN]|[E{I|L}]|[KN]}GQ[Q{I|L}]VTY;[QA][RN]AARTY 4.286;3.915;3.7836;3.5887;3.4074;3.3449;3.212;3.0812;3.0448;3.0325 -;-;-;-;-;-;-;-;-;- 1373 + 1 2.381 79549.7 1.0 2321 4126 6447 SUDHL4_400M_050219_1,6449 SUDHL4_400M_050219_1,6449,YKVTYLTY False False NVIRDAVTY 33.808683 525.780505359173 3682086.5 6447.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 6.022297223409017 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6450 33.812 155.0 426720.0 25 0 56884.0 + 9512 FLDTSNQHL 9 90 537.7645329107286 1073.514512888257 2 537.7655517458916 MULTI CID FTMS 0 0 0 6447 291080.4375 0.4245047855703882 -1 0.0107612609863281 3 Unmodified _FLDTSNQHL_ ENSG00000134061|ENST00000256447|CD180 39.94969957227396 0.0757326808254658 5 STD{I|L}E 5 8 46.81 0.0 0.0 4.3605 0.0 0.0 510.2563038556656 0.0 510.2563038556656 0.0 33.7113751626007 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 STD{I|L}E 4.3605 - 167 1 2.381 57800.4 1.0 2322 4126 6447 SUDHL4_400M_050219_1,6450 SUDHL4_400M_050219_1,6450,FLDTSNQHL True True FLDTSNQHL 33.811766 537.765551745892 6564948.5 6447.0 ENSG00000134061|ENST00000256447|CD180 5.890792687733968 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6451 33.826 800.0 277550.0 25 0 43099.0 + 10280 FQYSKSPSL 9 163 528.7714359753185 1055.5283190174368 2 528.7729369997978 MULTI CID FTMS 0 0 0 6447 132400.75 0.4916636514221007 -3 0.0733757019042968 4 Unmodified _FQYSKSPSL_ ENSG00000258890|ENST00000556440|CEP95;ENST00000553956.6_1_17:62527116-62533894:+|nuORF;nc|ENSG00000258890|Q96GE4-2|CEP95 75.76082778847304 0.0188720312721366 5 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YSKSPS{I|L} 9 0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} + + 48.395 19.934 7.2454 4.5849 4.5849 58.008 0.0 0.0 0.0 0.0 5.852614647255052 0.0 0.0 0 1.1421590589602533 0.0 1.615356566548286 0.0 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YSKSPS{I|L} 4.5849 + + 850 + 1 2.381 170939.0 0.8199999928474426 2323 4126 6447 SUDHL4_400M_050219_1,6451 SUDHL4_400M_050219_1,6451,FQYSKSPSL True True FQYSKSPSL 33.825598 528.772936999798 1432249.75 6447.0 nc|ENSG00000258890|Q96GE4-2|CEP95;;ENST00000553956.6_1_17:62527116-62533894:+|nuORF;;ENSG00000258890|ENST00000556440|CEP95 6.237953503926595 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6452 33.838 732.0 349700.0 25 0 119830.0 -1 0 131 574.2533772719173 573.2461008053173 1 574.2533447146416 MULTI CID FTMS 0 0 0 6447 243911.796875 0.5378820581373537 2 -0.0636062622070312 5 5 Y 1 -1 12.218 0.0 0.0 2.1315 0.0 0.0 392.171284986761 0.0 392.171284986761 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.1315 - 84 + 1 2.381 190132.7 1.0 2324 4126 6447 SUDHL4_400M_050219_1,6452 SUDHL4_400M_050219_1,6452, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6453 33.852 800.0 159450.0 25 0 10905.0 41640 VPPPTPPPVAA 11 176 521.7981609445465 1041.5817689558928 2 521.7978393435478 MULTI CID FTMS 0 0 0 6447 144778.84375 1.0 0 0.0 6 Unmodified _VPPPTPPPVAA_ ENSG00000150768|ENST00000280346|DLAT;ENST00000533297.1_1_11:111896132-111933256:+|nuORF 24.020572477871973 0.5281922720044371 5 PVAA 4 7 24.45 0.0 0.0 2.3474 0.0 0.0 685.3775909404902 0.0 685.3775909404902 0.0 6.034087492996388 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 + PVAA 2.3474 + + 754 1 2.381 106537.8 0.8299999833106995 2325 4126 6447 SUDHL4_400M_050219_1,6453 SUDHL4_400M_050219_1,6453,VPPPTPPPVAA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6455 33.856 103.0 556250.0 25 0 44091.0 -1 0 71 918.4205074480134 1834.826461962827 2 918.4211303591728 MULTI CID FTMS 0 0 0 6454 665615.4375 0.624842144418642 -3 0.1045684814453125 1 5 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 77.674 0.0 0.0 4.2333 4.2333 83.32 0.0 0.0 0.0 4.164317917986224 61.27451730244511 4.164317917986224 9.013902021140495 0 0.8807196863200843 0.0 0.0 0.805462187404089 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}[HV]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[HV]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QWN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.2333;3.742;3.742;3.742;3.742;3.4383;3.1394;2.7074;2.3417 -;-;-;-;-;-;-;-;- 627 1 2.381 48783.5 1.0 2326 4127 6454 SUDHL4_400M_050219_1,6455 SUDHL4_400M_050219_1,6455, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6456 33.861 248.0 465410.0 25 0 38387.0 + 15960 ITAPPSRVL 9 118 477.2927396543278 952.5709263754557 2 477.2921020388603 MULTI CID FTMS 0 0 0 6454 212725.296875 0.0628019094809421 44 -1.32904052734375 2 Unmodified _ITAPPSRVL_ ENSG00000099194|ENST00000370355|SCD 21.53697664764585 0.2571576504437394 5 {I|L}TAP 4 5 56.23 0.0 0.0 5.903 0.0 0.0 0.0 567.3271665331615 567.3271665331615 39.92210576250368 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.0 + {I|L}TAP 5.903 + + 273 + 1 2.381 94353.9 1.0 2327 4127 6454 SUDHL4_400M_050219_1,6456 SUDHL4_400M_050219_1,6456,ITAPPSRVL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6458 33.865 89.0 549220.0 25 0 63503.0 + 35286 SSLVQVTTETI 11 90 589.3193540293499 1176.6241551254998 2 589.3187133669853 MULTI CID FTMS 0 0 0 6457 556486.5625 0.1221224008724556 -2 0.0636062622070312 1 Unmodified _SSLVQVTTETI_ REV__ENSG00000120549|ENST00000376454|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-3|KIAA1217 27.628801355627647 0.4434699450731472 5 [{I|L}T]Q[TA]VQ 7 -1 34.319 0.0 0.0 2.9167 0.0 0.0 0.0 432.1977994948936 432.1977994948936 22.53607366494561 0.0 0.0 0.0 0 0.0 0.7958800173440752 1.1549471895720984 1.075257498915995 [{I|L}T]Q[TA]VQ 2.9167 - 223 1 2.381 40446.5 1.0 2328 4128 6457 SUDHL4_400M_050219_1,6458 SUDHL4_400M_050219_1,6458,SSLVQVTTETI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6459 33.874 493.0 289460.0 25 0 36520.0 -1 0 128 406.7893888369887 811.5642247407774 2 406.7897827029228 MULTI CID FTMS 0 0 0 6457 238359.390625 0.245874736347514 4 -0.2751007080078125 2 5 {I|L}G{I|L}K[R{I|L}]{I|L} 7 -1 + 36.431 0.0 0.0 4.489 4.489 89.071 0.0 0.0 0.0 20.924822310099493 0.6415881451454908 0.6415881451454908 36.43130718590854 0 0.7742275032520141 0.0 0.0 0.3494850021680094 {I|L}G{I|L}K[R{I|L}]{I|L} 4.489 - 55 + 1 2.381 115034.7 1.0 2329 4128 6457 SUDHL4_400M_050219_1,6459 SUDHL4_400M_050219_1,6459, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6460 33.876 114.0 473140.0 25 0 34979.0 + 30794 RIFGTDSQY 9 92 543.7647150278675 1085.514877122535 2 543.7641479372978 MULTI CID FTMS 0 0 0 6457 222406.84375 0.1611920479103976 7 -0.3591041564941406 3 Unmodified _RIFGTDSQY_ ENSG00000052802|ENST00000261507|MSMO1;nc|ENSG00000052802|Q15800-2|MSMO1 20.41453444215458 0.284085796332423 5 [R{I|L}]{M(Oxidation (M))|F}{[SA]|[TG]}DSQY 9 0 + 32.06 0.0 0.0 2.9535 2.9535 82.559 0.0 0.0 0.0 2.7892308603380016 19.586062234663903 2.7892308603380016 9.208187539523756 0 0.4247425010840047 0.0 0.3252574989159953 0.0 + + [R{I|L}]{M(Oxidation (M))|F}{[SA]|[TG]}DSQY;[R{I|L}]{M(Oxidation (M))|F}{[SA]|[TG]}DS[AG]Y 2.9535;2.1052 +;- + 76 1 2.381 46072.7 1.0 2330 4128 6457 SUDHL4_400M_050219_1,6460 SUDHL4_400M_050219_1,6460,RIFGTDSQY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6461 33.88 196.0 319680.0 25 0 41215.0 + 37693 TLNSSVQSI 9 93 474.7537680967752 0 474.7541992068291 PEAK CID FTMS 0 0 0 6457 168961.6875 0.7100295704811285 -2 0.0636062622070312 4 Unmodified _TLNSSVQSI_ ENSG00000120690|ENST00000239882|ELF1;nc|ENSG00000120690|P32519-2|ELF1 21.74664581756881 0.185237546287679 5 NE 2 8 7.4743 0.0 0.0 0.78884 0.0 0.0 619.3184970316379 82.06707178287343 701.3855688145113 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 NE 0.78884 - 75 + 1 2.381 53024.0 1.0 2331 4128 6457 SUDHL4_400M_050219_1,6461 SUDHL4_400M_050219_1,6461,TLNSSVQSI False True TLNSSVQSI 33.880139 474.754199206829 1375099.625 6457.0 nc|ENSG00000120690|P32519-2|ELF1;;ENSG00000120690|ENST00000239882|ELF1 2.322080353895823 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6462 33.894 800.0 134860.0 25 0 38045.0 -1 0 54 877.4275090438847 0 877.4261962771416 PEAK CID FTMS 0 0 0 6457 84298.3046875 1.0 0 0.0 5 5 YS 2 -1 9.464 0.0 0.0 0.53992 0.0 0.0 147.06214003982387 1352.6250704401002 1499.687210479924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YS 0.53992 - 12 + 1 2.381 79057.4 0.6700000166893005 2332 4128 6457 SUDHL4_400M_050219_1,6462 SUDHL4_400M_050219_1,6462, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6463 33.897 160.0 502140.0 25 0 45829.0 -1 0 110 547.33253794176 546.32526147516 1 550.3408691287041 MULTI CID FTMS 0 0 0 6457 480679.46875 0.7840105557250598 2 -0.1411514282226562 6 5 {I|L}{I|L}{I|L} 3 -1 27.447 0.0 0.0 5.024 0.0 0.0 0.0 204.04951009260063 204.04951009260063 17.35863111416478 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}{I|L} 5.024 - 13 1 2.381 67502.1 1.0 2333 4128 6457 SUDHL4_400M_050219_1,6463 SUDHL4_400M_050219_1,6463, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6464 33.911 800.0 211170.0 25 0 26092.0 + -1 WLNQYCSHAFY 11 120 744.8230166787735 1487.6314804243468 2 744.8223144412041 MULTI CID FTMS 0 0 0 6457 117185.7890625 0.6003727889148112 -2 0.0636062622070312 7 Carbamidomethyl (C) _WLNQYC(Carbamidomethyl (C))SHAFY_ REV__ENSG00000091128|ENST00000388781|LAMB4;REV__ENST00000475469.1_1_7:107703197-107763609:-|nuORF;REV__nc|ENSG00000091128|A4D0S4-3|LAMB4 12.240655878213236 0.7805268987462184 5 {[DA]|[EG]}{[ET]|[MV]}TEAQQDA[Y{M(Oxidation (M))|F}] 13 -1 + 74.778 0.0 0.0 5.0267 5.0267 79.329 0.0 0.0 0.0 0.6561725834235261 44.44577449201505 0.6561725834235261 1.6452935963211246 0 1.0941876774005248 1.2218487496163564 0.4916440611282626 1.6237125054200234 {[DA]|[EG]}{[ET]|[MV]}TEAQQDA[Y{M(Oxidation (M))|F}];{[DA]|[EG]}{M(Oxidation (M))|F}[PS]EAQQDA[Y{M(Oxidation (M))|F}];{[DA]|[EG]}QQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQDA[Y{M(Oxidation (M))|F}];{[DA]|[EG]}{[ET]|[MV]}TEAQ[AG]DA[Y{M(Oxidation (M))|F}];{[DA]|[EG]}{M(Oxidation (M))|F}[PS]EAQ[AG]DA[Y{M(Oxidation (M))|F}];{[DA]|[EG]}GAQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QQDA[Y{M(Oxidation (M))|F}];{[DA]|[EG]}{[ET]|[MV]}TEAQQW[Y{M(Oxidation (M))|F}];[WH]{[HG]|PP}EAQQDA[Y{M(Oxidation (M))|F}];{[DA]|[EG]}{M(Oxidation (M))|F}[PS]EAQQW[Y{M(Oxidation (M))|F}];{[DA]|[EG]}{[ET]|[MV]}TEA[AG]QDA[Y{M(Oxidation (M))|F}] 5.0267;4.9161;4.7281;4.4168;4.3062;4.2982;4.2947;4.2209;4.1841;4.1819 -;-;-;-;-;-;-;-;-;- 5080 1 2.381 122329.4 0.7900000214576721 2334 4128 6457 SUDHL4_400M_050219_1,6464 SUDHL4_400M_050219_1,6464,WLNQYCSHAFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6465 33.917 346.0 259660.0 25 0 45463.0 + 28828 QADPTGRLL 9 115 485.77018333787817 0 485.7722350955009 PEAK CID FTMS 0 0 0 6457 103751.3125 0.7996851881569808 1 -0.0794448852539062 8 Unmodified _QADPTGRLL_ ENSG00000172936|ENST00000650905|MYD88;ENST00000416282.2_1_3:38180152-38182096:+|nuORF;ENST00000460295.1_1_3:38180152-38181542:+|nuORF;nc|ENSG00000172936|Q99836-2|MYD88;nc|ENSG00000172936|Q99836-3|MYD88;nc|ENSG00000172936|Q99836-4|MYD88;nc|ENSG00000172936|Q99836-5|MYD88;nc|ENSG00000172936|Q99836-6|MYD88 32.78568957990786 0.0971838787772021 5 DPT 3 6 18.843 0.0 0.0 1.9435 0.0 0.0 199.0972991935313 454.2789431341596 653.376242327691 0.0 0.0 0.0 0.0 0 0.6139829889124311 0.0 0.0 0.0 + DPT 1.9435 + + 75 + 1 2.381 74362.7 1.0 2335 4128 6457 SUDHL4_400M_050219_1,6465 SUDHL4_400M_050219_1,6465,QADPTGRLL True True QADPTGRLL 33.917251 485.772235095501 3900174.25 6457.0 ENST00000460295.1_1_3:38180152-38181542:+|nuORF;;nc|ENSG00000172936|Q99836-2|MYD88;;nc|ENSG00000172936|Q99836-6|MYD88;;ENSG00000172936|ENST00000650905|MYD88;;ENST00000416282.2_1_3:38180152-38182096:+|nuORF;;nc|ENSG00000172936|Q99836-5|MYD88;;nc|ENSG00000172936|Q99836-4|MYD88;;nc|ENSG00000172936|Q99836-3|MYD88 3.24578857421875 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6466 33.931 800.0 70672.0 25 0 4001.0 -1 0 91 733.7072631716728 0 733.7072631716728 PEAK CID FTMS 0 0 0 -1 0 9 5 WQEA 4 -1 9.6412 0.0 0.0 0.65793 0.0 0.0 328.94606381516024 619.2161348932249 948.1621987083852 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WQEA 0.65793 - 48 + 1 2.381 46287.4 0.75 2336 4128 6457 SUDHL4_400M_050219_1,6466 SUDHL4_400M_050219_1,6466, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6467 33.94 526.0 159810.0 25 0 9270.2 + 42385 VTDQLPKV 8 139 450.2652906889762 0 450.2650939822197 PEAK CID FTMS 0 0 0 6457 96579.90625 1.0 0 0.0 10 Unmodified _VTDQLPKV_ REV__ENSG00000180336|ENST00000409122|MEIOC;REV__nc|ENSG00000180336|A2RUB1-2|MEIOC 5.760428011301431 0.5786759180849727 5 D 1 -1 4.0013 0.0 0.0 0.44533 0.0 0.0 698.3994798381103 82.06704889468983 780.4665287328002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 D 0.44533 + + 13 + 1 2.381 70030.7 1.0 2337 4128 6457 SUDHL4_400M_050219_1,6467 SUDHL4_400M_050219_1,6467,VTDQLPKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6469 33.945 28.0 1267100.0 25 0 81692.0 + 33131 SEVAKDRVV 9 54 501.782418190652 1001.550283448104 2 501.7826415896416 MULTI CID FTMS 0 0 0 6468 1289528.75 0.1551658020031043 4 -0.2029991149902343 1 Unmodified _SEVAKDRVV_ REV__ENSG00000105568|ENST00000322088|PPP2R1A;REV__ENSG00000137713|ENST00000527614|PPP2R1B;REV__ENST00000468280.5_1_19:52693376-52714746:+|nuORF;REV__nc|ENSG00000137713|P30154-2|PPP2R1B;REV__nc|ENSG00000137713|P30154-3|PPP2R1B;REV__nc|ENSG00000137713|P30154-4|PPP2R1B 15.847184025352805 0.4077185912009129 5 {I|L}QSEV 5 -1 43.756 0.0 0.0 4.3688 0.0 0.0 427.2545643537125 0.0 427.2545643537125 0.0 29.534021960761265 0.0 0.0 0 0.3807196863200844 0.0 0.5 0.0 {I|L}QSEV 4.3688 - 54 1 2.368 31444.4 1.0 2338 4129 6468 SUDHL4_400M_050219_1,6469 SUDHL4_400M_050219_1,6469,SEVAKDRVV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6470 33.959 800.0 104520.0 25 0 16342.0 -1 0 56 993.1047932815652 4960.487584074826 5 993.7062866091728 MULTI CID FTMS 0 0 0 6468 132214.390625 0.2425809132351602 5 -0.2737770080566406 2 5 {I|L} 1 -1 6.9897 0.0 0.0 0.14091 0.0 0.0 2868.803210150801 1975.5521270856784 4844.35533723648 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.14091 - 3 + 1 2.368 62579.5 0.9700000286102296 2339 4129 6468 SUDHL4_400M_050219_1,6470 SUDHL4_400M_050219_1,6470, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6471 33.96 55.0 1829500.0 25 0 212910.0 + 38648 TTIKAFFPKK 10 103 394.2411026759341 1179.7014786280024 3 394.2414733767509 MULTI CID FTMS 0 0 0 6468 783913.75 0.0611486294374588 -3 0.1430511474609375 3 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 39.94969957227396 0.1580982266129622 5 TT{I|L}KY{I|L}WKK 9 4 + 91.38 0.0 0.0 7.746 7.746 98.002 0.0 0.0 0.0 65.5166096705586 17.230749808046326 17.230749808046326 91.04207477061271 0 0.7302046884880937 1.3979400086720375 0.0 0.8494850021680094 TT{I|L}KY{I|L}WKK;[K{I|L}]Y{[DS]|[MA]|[CV]|TT}{I|L}K[WK] 7.746;0.028667 -;- 454 + 1 2.368 86655.2 1.0 2340 4129 6468 SUDHL4_400M_050219_1,6471 SUDHL4_400M_050219_1,6471,TTIKAFFPKK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6472 33.962 63.0 2161600.0 25 0 415280.0 + 14944 ILMEHIHKL 9 130 378.5546115961645 1132.6420053886936 3 378.5547363162041 MULTI CID FTMS 0 0 0 6468 762587.875 0.0639108421196075 -2 0.0883598327636718 4 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 42.312485326615175 0.0627620958981271 5 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 77.392 0.0 0.0 6.8329 6.8329 85.617 0.0 0.0 0.0 36.47817481888637 2.552725051033065 2.552725051033065 2.552725051033065 0 0.5994850021680094 2.0 0.3054621874040891 0.2302046884880938 + + {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}MEH{I|L}H{I|L}K;{I|L}{I|L}ME{I|L}HHK{I|L};{I|L}{I|L}ME{I|L}HH{I|L}K;{I|L}{I|L}[YV]EQQK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQK{I|L};{I|L}{I|L}[YV]EQQ{I|L}K;{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQ{I|L}K;{I|L}{I|L}ME{I|L}[R{M(Oxidation (M))|F}]V{I|L};{I|L}VY{I|L}EQQK{I|L} 6.8329;6.6075;6.1995;5.9741;4.4495;4.3655;4.2241;4.1401;4.0443;1.8463 +;-;-;-;-;-;-;-;-;- + 670 + 1 2.368 110664.3 1.0 2341 4129 6468 SUDHL4_400M_050219_1,6472 SUDHL4_400M_050219_1,6472,ILMEHIHKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6473 33.963 46.0 829210.0 25 0 123760.0 + 14978 ILQDRLNQV 9 63 549.8163015299976 1097.6180501267952 2 549.8165161013603 MULTI CID FTMS 0 0 0 6468 377894.8125 0.8791458163410041 1 -0.06170654296875 5 Unmodified _ILQDRLNQV_ ENSG00000094804|ENST00000209728|CDC6 31.26834338654808 0.1333407332142048 5 {I|L}{I|L}QD 4 5 57.423 0.0 0.0 5.2316 0.0 0.0 0.0 625.3402193658811 625.3402193658811 50.43305028184122 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + {I|L}{I|L}QD 5.2316 + + 14 + 1 2.368 35068.4 1.0 2342 4129 6468 SUDHL4_400M_050219_1,6473 SUDHL4_400M_050219_1,6473,ILQDRLNQV False True ILQDRLNQV 33.962813 549.81651610136 4897758.5 6468.0 ENSG00000094804|ENST00000209728|CDC6 6.176533540089925 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6474 33.977 800.0 182290.0 25 0 15005.0 + + -1 GLPENPAGV 9 120 852.8848174146918 1703.7550818961836 2 853.3878661990166 MULTI CID FTMS 0 0 0 6468 161115.953125 1.0 0 0.0 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SWHKMWREWWM_ ENST00000380814.4_1_13:29292859-29293099:-|nuORF 1.1933415558491238 0.8695176722560516 5 {[HG]|PP}D{M(Oxidation (M))|F}ANQ[HD][EP]NVPQ 15 -1 {[HG]|PP}D + + 79.938 1.8397 0.59512 4.6919 4.6919 58.263 0.0 0.0 0.0 0.0 35.842513349756075 0.0 0.0 0 1.086696871556164 0.0 0.3252574989159953 2.613364334130467 {[HG]|PP}D{M(Oxidation (M))|F}ANQ[HD][EP]NVPQ 4.6919 - 10398 + 1 2.368 98735.6 0.8199999928474426 2343 4129 6468 SUDHL4_400M_050219_1,6474 SUDHL4_400M_050219_1,6474,SWHKMWREWWM False False GLPENPAGV 33.976664 852.8869 1126959.5 6468.0 ENST00000380814.4_1_13:29292859-29293099:-|nuORF 7.182318369547526 1.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6475 33.984 436.0 254790.0 25 0 22366.0 + 2283 AQHPSALRF 9 123 513.7780012157584 1025.5414494983168 2 513.7768432497978 MULTI CID FTMS 0 0 0 6468 132930.484375 1.0 0 0.0 7 Unmodified _AQHPSALRF_ ENSG00000106009|ENST00000340611|BRAT1;ENST00000469750.5_1_7:2583168-2595320:-|nuORF;nc|ENSG00000106009|Q6PJG6-2|BRAT1 27.628801355627647 0.1796483985696185 5 [QA]HPS 5 4 30.005 0.0 0.0 2.9258 0.0 0.0 0.0 502.2790316217407 502.2790316217407 9.714628317912783 0.0 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.0 + [QA]HPS 2.9258 + + 154 + 1 2.368 88181.7 1.0 2344 4129 6468 SUDHL4_400M_050219_1,6475 SUDHL4_400M_050219_1,6475,AQHPSALRF False True AQHPSALRF 33.984432 513.776843249798 1080278.375 6468.0 ENSG00000106009|ENST00000340611|BRAT1;;ENST00000469750.5_1_7:2583168-2595320:-|nuORF;;nc|ENSG00000106009|Q6PJG6-2|BRAT1 1.979305386543274 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6476 33.998 800.0 206290.0 25 0 15559.0 + 18203 KVASLLHQV 9 201 497.805749578632 993.596946224064 2 497.8054687380791 MULTI CID FTMS 0 0 0 6468 107109.5078125 1.0 0 0.0 8 Unmodified _KVASLLHQV_ ENSG00000168884|ENST00000315423|TNIP2;ENST00000502256.1_1_4:2743986-2746461:-|nuORF;ENST00000505186.1_1_4:2743986-2747794:-|nuORF;nc|ENSG00000168884|Q8NFZ5-2|TNIP2 43.9818466556824 0.0535980856389242 5 KVV[TA]{I|L}HQV 9 3 + 61.833 0.0 0.0 6.2232 6.2232 83.404 0.0 0.0 0.0 21.75083189322727 6.755828144472034 6.755828144472034 1.989700043360188 0 2.0709991640913 0.6777807052660807 0.5 0.9916440611282626 KVV[TA]{I|L}HQV;KVA{[TV]|[{I|L}S]}{I|L}HQV;KVV[TA]{I|L}HVQ;KVV[TA]{I|L}HN{I|L};KVA{[TV]|[{I|L}S]}{I|L}HVQ;KVA{[TV]|[{I|L}S]}{I|L}HN{I|L};KVV[TA]{I|L}H[AG]V;KVV{[VA]|[{I|L}G]}[KT]SY;KVA{[TV]|[{I|L}S]}{I|L}H[AG]V;KVAVV[KT]SY 6.2232;6.0229;5.5432;5.5331;5.343;5.3329;4.2984;4.2963;4.0981;4.096 -;+;-;-;-;-;-;-;-;- + 661 + 1 2.368 124960.7 0.6299999952316284 2345 4129 6468 SUDHL4_400M_050219_1,6476 SUDHL4_400M_050219_1,6476,KVASLLHQV True True KVASLLHQV 33.998249 497.805468738079 688174.4375 6468.0 ENST00000505186.1_1_4:2743986-2747794:-|nuORF;;nc|ENSG00000168884|Q8NFZ5-2|TNIP2;;ENST00000502256.1_1_4:2743986-2746461:-|nuORF;;ENSG00000168884|ENST00000315423|TNIP2 5.104117552439372 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6477 34.002 194.0 447240.0 25 0 34067.0 4712 DEAQRLIIQ 9 114 543.3012447310674 0 543.3016845583916 PEAK CID FTMS 0 0 0 6468 230683.90625 0.7123885645088897 -1 0.0794448852539062 9 Unmodified _DEAQRLIIQ_ ENSG00000115290|ENST00000263915|GRB14;nc|ENSG00000115290|Q14449-2|GRB14 10.823927491677226 0.3028200641087142 5 ANQD{M(Oxidation (M))|F} 5 8 15.477 0.0 0.0 1.427 0.0 0.0 328.286436140066 178.05156885318596 506.338004993252 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 ANQD{M(Oxidation (M))|F} 1.427 - 155 + 1 2.368 71554.5 1.0 2346 4129 6468 SUDHL4_400M_050219_1,6477 SUDHL4_400M_050219_1,6477,DEAQRLIIQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6479 34.006 63.0 1083600.0 25 0 88343.0 + 14520 IGQIKRIL 8 85 470.8188041709331 939.6230554086662 2 470.8189269900322 MULTI CID FTMS 0 0 0 6478 739633.6875 0.1736659401565411 2 -0.1339492797851562 1 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 28.486842064014134 0.4448922141344407 5 {I|L}GQ{I|L}K 5 -1 34.935 0.0 0.0 3.7179 0.0 0.0 0.0 397.2557467096313 397.2557467096313 21.83561654977865 0.0 0.0 0.0 0 0.4177353201839437 0.8538719643217619 0.0 0.0 {I|L}GQ{I|L}K 3.7179 + + 30 + 1 2.368 59284.6 1.0 2347 4130 6478 SUDHL4_400M_050219_1,6479 SUDHL4_400M_050219_1,6479,IGQIKRIL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6480 34.009 129.0 308900.0 25 0 15160.0 + 13679 HQFLQNEY 8 69 539.751387754011 1077.488222574822 2 539.7516357302666 MULTI CID FTMS 0 0 0 6478 283483.625 0.1439935750266686 4 -0.2120704650878906 2 Unmodified _HQFLQNEY_ ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1 26.88365393820708 0.4786498634179528 5 [HQ]{M(Oxidation (M))|F}{I|L}QNEY 8 0 + 58.136 0.0 0.0 5.3955 5.3955 89.22 0.0 0.0 0.0 6.989700043360188 52.65153777800478 6.989700043360188 9.262137858390815 0 0.5 0.0 0.0 0.5 + + [HQ]{M(Oxidation (M))|F}{I|L}QNEY;[HQ]{M(Oxidation (M))|F}{I|L}[AG]NEY;[HQ]{M(Oxidation (M))|F}{I|L}QGGEY;[HQ]{M(Oxidation (M))|F}{I|L}[AG]GGEY;[QP][WK]NNEY;[QP][WK]GGNEY;[QP][WK]NGGEY;[{M(Oxidation (M))|F}V][RH]{NN|[MP]|[D{I|L}]|[EV]}EY 5.3955;4.5359;4.5359;3.6813;2.6888;1.8292;1.8292;1.2664 +;-;-;-;-;-;-;- + 122 1 2.368 35853.4 1.0 2348 4130 6478 SUDHL4_400M_050219_1,6480 SUDHL4_400M_050219_1,6480,HQFLQNEY False True HQFLQNEY 34.009097 539.751635730267 19806382.0 6478.0 ENSG00000167986|ENST00000301764|DDB1;;nc|ENSG00000167986|Q16531-2|DDB1 7.289411544799805 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6481 34.01 46.0 1728000.0 25 0 196660.0 + 14947 ILMEHIHKL 9 90 567.328649860913 1132.6427467886258 2 567.3288452029228 MULTI CID FTMS 0 0 0 6478 1261219.25 0.4578168022046163 -1 0.06170654296875 3 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 49.74193281347159 0.0409357517904489 5 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 90.974 0.0 0.0 8.0321 8.0321 97.734 0.0 0.0 0.0 59.82808907054226 11.2720226693571 11.2720226693571 31.414412723804546 0 2.004432191740108 2.0 0.8494850021680094 0.2134679910804404 + + {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQK{I|L};{I|L}{I|L}[YV]EQQK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{I|L}{I|L}HK{I|L};{[YC]|[HE]}M{I|L}{I|L}{I|L}HK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{I|L}H{I|L}K{I|L};{[YC]|[HE]}M{I|L}{I|L}H{I|L}K{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}{I|L}HK{I|L}{I|L};{[YC]|[HE]}M{I|L}{I|L}HK{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{I|L}HK{I|L}{I|L}{I|L} 8.0321;5.2585;4.9691;4.0097;3.803;3.4827;3.276;3.2632;3.0565;3.0126 +;-;-;-;-;-;-;-;-;- + 613 + 1 2.368 64272.2 1.0 2349 4130 6478 SUDHL4_400M_050219_1,6481 SUDHL4_400M_050219_1,6481,ILMEHIHKL True True ILMEHIHKL 34.010367 567.328845202923 208488120.0 6478.0 ENSG00000108298|ENST00000225430|RPL19;;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;;ENST00000432746.1_1_7:102781798-102782185:-|nuORF 6.565346399943034 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6482 34.014 190.0 414810.0 25 0 64099.0 + 2998 AVIKSLAY 8 103 432.7632354724004 863.5119180116009 2 432.7632629275322 MULTI CID FTMS 0 0 0 6478 237370.4375 0.1480739451361062 3 -0.1412925720214843 4 Unmodified _AVIKSLAY_ REV__ENSG00000073614|ENST00000399788|KDM5A;REV__nc|ENSG00000073614|P29375-2|KDM5A 13.50788311687929 0.7113601687236069 5 {[TV]|[{I|L}S]}[KA]V{I|L}AY 8 -1 {[TV]|[{I|L}S]}[KA]V{I|L} + + 18.583 2.6862 0.43936 2.1521 2.1521 53.045 0.0 0.0 0.0 0.0 5.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 {[TV]|[{I|L}S]}[KA]V{I|L}AY 2.1521 - 77 + 1 2.368 64785.2 1.0 2350 4130 6478 SUDHL4_400M_050219_1,6482 SUDHL4_400M_050219_1,6482,AVIKSLAY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6483 34.021 379.0 335470.0 25 0 27516.0 + 17202 KLLDVVHPA 9 149 496.30055300415177 990.5865530751036 2 496.3005248904228 MULTI CID FTMS 0 0 0 6478 212048.484375 0.6982573181401048 -2 0.1411514282226562 5 Unmodified _KLLDVVHPA_ ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;nc|ENSG00000135624|Q99832-3|CCT7 75.76082778847304 0.0188720312721366 5 K{I|L}{I|L}DVVHD 8 2 68.973 0.0 0.0 6.9629 0.0 0.0 0.0 68.0514162652953 68.0514162652953 50.72931973064844 0.0 0.0 0.0 0 2.635151878060192 0.0 0.7742275032520141 0.0 K{I|L}{I|L}DVVHD 6.9629 - 942 + 1 2.368 98812.0 1.0 2351 4130 6478 SUDHL4_400M_050219_1,6483 SUDHL4_400M_050219_1,6483,KLLDVVHPA True True KLLDVVHPA 34.020803 496.300524890423 1708151.875 6478.0 nc|ENSG00000135624|Q99832-3|CCT7;;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;;ENSG00000135624|ENST00000258091|CCT7;;ENST00000461290.5_1_2:73461506-73471178:+|nuORF 8.043639500935873 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6484 34.024 158.0 486760.0 25 0 69923.0 + + 19359 VQIPPSTTY 9 100 503.266560510456 0 503.2677795290947 PEAK CID FTMS 0 0 0 6478 160437.796875 1.0 0 0.0 6 Unmodified _LEPYQSLGV_ ENSG00000129351|ENST00000588657|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-2|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-6|ILF3 20.453626601364224 0.1969592619112565 5 {I|L} 1 -1 8.4949 0.0 0.0 0.84566 0.0 0.0 664.3090781968903 224.1046541803344 888.4137323772246 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 0.84566 + + 10 + 1 2.368 62677.8 1.0 2352 4130 6478 SUDHL4_400M_050219_1,6484 SUDHL4_400M_050219_1,6484,LEPYQSLGV False False VQIPPSTTY 34.023919 501.7825 1879962.375 6478.0 ENSG00000129351|ENST00000588657|ILF3;;nc|ENSG00000129351|Q12906-4|ILF3;;nc|ENSG00000129351|Q12906-2|ILF3;;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;;nc|ENSG00000129351|Q12906|ILF3;;nc|ENSG00000129351|Q12906-5|ILF3;;nc|ENSG00000129351|Q12906-3|ILF3;;nc|ENSG00000129351|Q12906-6|ILF3 3.645824829737345 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6485 34.03 306.0 157750.0 25 0 12817.0 -1 HLLWFEQWCLQ 11 82 780.3784463329372 1558.7423397326745 2 780.3802368044853 MULTI CID FTMS 0 0 0 6478 136785.96875 0.7224760878898071 -1 0.06170654296875 7 Carbamidomethyl (C) _HLLWFEQWC(Carbamidomethyl (C))LQ_ ENSG00000142207|ENST00000382751|URB1 10.799506525563784 0.8105043987015127 5 [NP]{I|L}NE{[NV]|[RG]}[NS]NG{M(Oxidation (M))|F}{I|L}Q 14 -1 + 84.535 0.0 0.0 5.4233 5.4233 80.962 0.0 0.0 0.0 13.459223531972796 45.81907991397158 13.459223531972796 1.7609125905568137 0 2.8494850021680094 1.3010299956639813 0.2887254899964357 0.0 [NP]{I|L}NE{[NV]|[RG]}[NS]NG{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NE{[NV]|[RG]}{[TV]|[{I|L}S]}DG{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NE{[NV]|[RG]}[WE]G{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NE{[NV]|[RG]}WW{M(Oxidation (M))|F}{I|L}Q;[YE]Q[WR][W{M(Oxidation (M))|F}]G{M(Oxidation (M))|F}{I|L}Q 5.4233;5.3103;5.1886;4.9556;1.6838 -;-;-;-;- 314 1 2.368 38563.5 1.0 2353 4130 6478 SUDHL4_400M_050219_1,6485 SUDHL4_400M_050219_1,6485,HLLWFEQWCLQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6486 34.043 800.0 100210.0 25 0 6148.5 -1 0 96 925.4288525731793 1848.8431522131584 2 925.9310790896416 MULTI CID FTMS 0 0 0 6478 114635.8828125 0.3461883263128639 -6 0.2546348571777344 8 5 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QAED[WH]{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 47.615 0.0 0.0 2.5754 2.5754 74.155 0.0 0.0 0.0 3.726852090036523 28.40674667758151 3.726852090036523 1.8689966030397187 0 0.8807196863200843 0.0 0.0 0.4247425010840047 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QAED[WH]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]Q[YE]{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.5754;2.4743;1.8448;1.8113 -;-;-;- 465 1 2.368 60266.3 0.6399999856948853 2354 4130 6478 SUDHL4_400M_050219_1,6486 SUDHL4_400M_050219_1,6486, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6487 34.057 800.0 93837.0 25 0 13367.0 + 9774 FNDVDKWQYF 10 116 681.3098111986465 0 681.3099243044853 PEAK CID FTMS 0 0 0 6478 103041.078125 0.9736451397536208 1 -0.0732612609863281 9 Unmodified _FNDVDKWQYF_ REV__ENSG00000102996|ENST00000219271|MMP15 10.073929032068715 0.3742530088597855 5 N{M(Oxidation (M))|F} 2 -1 17.206 0.0 0.0 1.2646 0.0 0.0 328.14459436452154 768.3275240533811 1096.4721184179027 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 N{M(Oxidation (M))|F} 1.2646 - 133 + 1 2.368 58454.2 0.6600000262260437 2355 4130 6478 SUDHL4_400M_050219_1,6487 SUDHL4_400M_050219_1,6487,FNDVDKWQYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6488 34.071 800.0 198900.0 25 0 20416.0 -1 IVYFCTIVQG 10 148 600.3105521068692 1198.6065512805385 2 600.3096191287041 MULTI CID FTMS 0 0 0 6478 117794.5859375 1.0 0 0.0 10 Carbamidomethyl (C) _IVYFC(Carbamidomethyl (C))TIVQG_ ENSG00000187955|ENST00000297848|COL14A1;ENST00000432943.6_1_8:121160081-121289735:+|nuORF;nc|ENSG00000187955|Q05707-2|COL14A1;nc|ENSG00000187955|Q05707-3|COL14A1 13.90604991867851 0.6142120002215601 5 DD{I|L}[PA][{I|L}A]V{I|L}{[QG]|[NA]} 11 -1 30.89 0.0 0.0 2.5772 0.0 0.0 88.05320937324375 0.0 88.05320937324375 0.0 8.684951407624592 0.0 0.0 0 0.3252574989159953 0.0 1.1307196863200843 0.0 DD{I|L}[PA][{I|L}A]V{I|L}{[QG]|[NA]} 2.5772 - 164 1 2.368 118135.3 0.6700000166893005 2356 4130 6478 SUDHL4_400M_050219_1,6488 SUDHL4_400M_050219_1,6488,IVYFCTIVQG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6489 34.075 227.0 277670.0 25 0 32025.0 -1 VLMLIMVY 8 101 499.2764085750776 0 499.2752868533134 PEAK CID FTMS 0 0 0 6478 112579.3671875 0.4396997905758331 9 -0.4165115356445312 11 Oxidation (M) _VLM(Oxidation (M))LIMVY_ ENSG00000112195|ENST00000483722|TREML2 11.114462752807354 0.5290325060821968 5 V 1 -1 8.9794 0.0 0.0 0.90106 0.0 0.0 716.3953331640239 178.05147730045158 894.4468104644754 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V 0.90106 + + 26 + 1 2.368 56029.7 1.0 2357 4130 6478 SUDHL4_400M_050219_1,6489 SUDHL4_400M_050219_1,6489,VLMLIMVY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6491 34.08 64.0 750780.0 25 0 77368.0 10070 FPRQQLDL 8 65 508.7800175004863 1015.5454820677726 2 508.7799255251884 MULTI CID FTMS 0 0 0 6490 827839.9375 0.7473413697091734 -18 0.6220970153808594 1 Unmodified _FPRQQLDL_ ENSG00000242419|ENST00000306593|PCDHGC4;nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4 18.13498045792455 0.6430038125133779 5 RAGTPE 6 7 45.878 0.0 0.0 4.5176 0.0 0.0 386.216112205275 0.0 386.216112205275 0.0 30.526238072024583 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 RAGTPE 4.5176 - 41 1 2.357 47049.1 1.0 2358 4131 6490 SUDHL4_400M_050219_1,6491 SUDHL4_400M_050219_1,6491,FPRQQLDL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6492 34.082 89.0 594310.0 25 0 67803.0 + 12073 GQFPGHNEF 9 89 516.7305607301898 1031.4465685271796 2 516.7304565310478 MULTI CID FTMS 0 0 0 6490 446395.09375 0.5221764390003352 -9 0.385986328125 2 Unmodified _GQFPGHNEF_ ENSG00000163171|ENST00000295324|CDC42EP3 39.94969957227396 0.0757326808254658 5 [WE]{[WT]|[RM]}P{M(Oxidation (M))|F} 6 8 40.195 0.0 0.0 3.8969 0.0 0.0 0.0 182.05701709579208 182.05701709579208 25.56810945375765 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.4247425010840047 0.3807196863200844 [WE]{[WT]|[RM]}P{M(Oxidation (M))|F} 3.8969 - 404 1 2.357 48879.1 1.0 2359 4131 6490 SUDHL4_400M_050219_1,6492 SUDHL4_400M_050219_1,6492,GQFPGHNEF True True GQFPGHNEF 34.082342 516.730456531048 80677998.0 6490.0 ENSG00000163171|ENST00000295324|CDC42EP3 8.524433135986328 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6493 34.084 19.0 3381500.0 25 0 353130.0 38651 TTIKAFFPKK 10 78 590.8581749647277 1179.701796996255 2 590.8581420779228 MULTI CID FTMS 0 0 0 6490 3127680.0 1.0 0 0.0 3 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 40.23920728925047 0.1550410903091231 5 TT{I|L}KY{I|L}WKK 9 4 + 104.29 0.0 0.0 8.8408 8.8408 98.979 0.0 0.0 0.0 83.09685037172876 18.46787486224656 18.46787486224656 61.44138788323808 0 2.1237125054200234 1.2218487496163564 0.0 0.3494850021680094 TT{I|L}KY{I|L}WKK;TT{I|L}K[RH][K{I|L}][PS] 8.8408;3.6326 -;- 170 + 1 2.357 53578.5 1.0 2360 4131 6490 SUDHL4_400M_050219_1,6493 SUDHL4_400M_050219_1,6493,TTIKAFFPKK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6494 34.086 106.0 429430.0 25 0 72829.0 + 20234 LLDEPTNHL 9 85 526.2750465530922 1050.5355401729844 2 526.2734252810478 MULTI CID FTMS 0 0 0 6490 292061.84375 0.7220401752214507 1 -0.0606880187988281 4 Unmodified _LLDEPTNHL_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 39.94969957227396 0.0757326808254658 5 {I|L}{I|L}[W{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}TY 8 6 + 61.688 0.0 0.0 5.872 5.872 92.529 0.0 0.0 0.0 40.74539712336197 14.904630595263413 14.904630595263413 22.501225267834 0 0.8807196863200843 2.0 0.0 0.3494850021680094 {I|L}{I|L}[W{I|L}]{[QD]|[EN]|[WG]|[KD]|[RS]}TY;{I|L}{I|L}[W{I|L}]{[{M(Oxidation (M))|F}C]|[YS]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[C(Carbamidomethyl (C))K]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{I|L}{I|L}{[QN]|[E{I|L}]|[KN]}{[WN]|[YH]}[YT];{I|L}[{M(Oxidation (M))|F}V][HA]TN[H{I|L}];{I|L}[{M(Oxidation (M))|F}V]Q[C(Carbamidomethyl (C))K]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5.872;3.7301;3.0648;1.8451;1.629;0.46591 -;-;-;-;-;- 134 + 1 2.357 39815.2 1.0 2361 4131 6490 SUDHL4_400M_050219_1,6494 SUDHL4_400M_050219_1,6494,LLDEPTNHL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6495 34.09 242.0 533470.0 25 0 75073.0 + -1 ILMEHIHKL 9 138 383.886233364229 1148.636870692887 3 383.8863403201103 MULTI CID FTMS 0 0 0 6490 210024.265625 0.6105118077691369 -1 0.0732612609863281 5 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF 32.89776655970281 0.1144444835665315 5 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L} 9 -1 + 86.175 0.0 0.0 7.5023 7.5023 86.299 0.0 0.0 0.0 30.457574905606748 1.9978990777703984 1.9978990777703984 1.9978990777703984 0 0.9361818737241734 1.3979400086720375 1.110924374808178 0.1861818737241735 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}H{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}E[{I|L}V][C(Carbamidomethyl (C))K]K;{I|L}{I|L}{M(Oxidation (M))|F}E[{I|L}V]{[DS]|[MA]|[CV]|TT}T{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C))R]K;{I|L}{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQK{I|L};{I|L}{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQ{I|L}K;[VP][HT][{I|L}V]EE{I|L}{I|L};[{I|L}T][YG][{I|L}V]EE{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QQK{M(Oxidation (M))|F}{I|L}{I|L}{I|L} 7.5023;7.3284;4.7543;4.6433;4.3389;3.0748;2.9009;2.2435;1.599;1.3734 +;-;-;-;-;-;-;-;-;- + 917 + 1 2.357 103746.2 1.0 2362 4131 6490 SUDHL4_400M_050219_1,6495 SUDHL4_400M_050219_1,6495,ILMEHIHKL False False ILMEHIHKL 34.090292 383.88634032011 14381877.25 6490.0 ENSG00000108298|ENST00000225430|RPL19;;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;;ENST00000432746.1_1_7:102781798-102782185:-|nuORF 5.889373620351155 3.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6496 34.094 183.0 260930.0 25 0 15937.0 + 31928 RVAQLEQVY 9 91 553.3038319245126 1104.593110915825 2 553.3038207888603 MULTI CID FTMS 0 0 0 6490 203018.984375 0.5454256991202391 -3 0.2144126892089843 6 Unmodified _RVAQLEQVY_ ENSG00000100028|ENST00000215829|SNRPD3;nc|ENSG00000286070|P62318-2|SNRPD3 17.11289562659939 0.3734572693229295 5 {I|L}EQVY 5 4 41.938 0.0 0.0 3.7967 0.0 0.0 454.2653980939469 0.0 454.2653980939469 0.0 29.772437815030624 0.0 0.0 0 1.0 0.0 0.0 0.0 + {I|L}EQVY 3.7967 + + 216 1 2.357 44211.3 1.0 2363 4131 6490 SUDHL4_400M_050219_1,6496 SUDHL4_400M_050219_1,6496,RVAQLEQVY False True RVAQLEQVY 34.093846 553.30382078886 4533935.0 6490.0 ENSG00000100028|ENST00000215829|SNRPD3;;nc|ENSG00000286070|P62318-2|SNRPD3 4.283239205678304 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6497 34.097 164.0 450720.0 25 0 28481.0 + 70 AAFGKSPEI 9 99 460.2481052388301 918.4816575444604 2 460.2484313845634 MULTI CID FTMS 0 0 0 6490 178318.828125 0.7451657520340664 -2 0.1349678039550781 7 Unmodified _AAFGKSPEI_ ENSG00000155561|ENST00000285968|NUP205 22.736283301280096 0.2418982879461534 5 AA{M(Oxidation (M))|F}[KG]S[EP]{I|L} 9 0 + 29.842 0.0 0.0 3.249 3.249 80.526 0.0 0.0 0.0 15.24235880684586 3.121374995494296 3.121374995494296 8.104480533390305 0 0.75 1.3010299956639813 0.0 0.0 + + AA{M(Oxidation (M))|F}[KG]S[EP]{I|L};AA[C(Carbamidomethyl (C))R]WKK;AA[C(Carbamidomethyl (C))R]K[WK];[PS]HHWKK;[PS]HHK[WK] 3.249;2.3667;2.2306;1.2277;1.0917 +;-;-;-;- + 175 + 1 2.357 59293.6 1.0 2364 4131 6490 SUDHL4_400M_050219_1,6497 SUDHL4_400M_050219_1,6497,AAFGKSPEI False True AAFGKSPEI 34.097056 460.248431384563 941379.5 6490.0 ENSG00000155561|ENST00000285968|NUP205 2.7399264574050903 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6498 34.1 168.0 289270.0 25 0 36772.0 + 20223 LLDATQHTL 9 79 506.27807319495497 1010.54159345671 2 506.2782165408134 MULTI CID FTMS 0 0 0 6490 168312.640625 1.0 0 0.0 8 Unmodified _LLDATQHTL_ ENSG00000072818|ENST00000158762|ACAP1;ENST00000576628.1_1_17:7240053-7245794:+|nuORF 25.399314129420983 0.2080152500878129 5 {I|L}{I|L}DYH 5 5 48.06 0.0 0.0 4.7558 0.0 0.0 0.0 366.1792086236938 366.1792086236938 34.9607625286837 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.4247425010840047 0.0 {I|L}{I|L}DYH 4.7558 - 56 + 1 2.357 42594.3 1.0 2365 4131 6490 SUDHL4_400M_050219_1,6498 SUDHL4_400M_050219_1,6498,LLDATQHTL False True LLDATQHTL 34.100329 506.278216540813 1049267.0 6490.0 ENST00000576628.1_1_17:7240053-7245794:+|nuORF;;ENSG00000072818|ENST00000158762|ACAP1 2.3285239537556968 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6499 34.105 277.0 272220.0 25 0 18317.0 + 26023 NLYPGNEGY 9 103 513.7296186590257 1025.4446843848514 2 513.7308837771416 MULTI CID FTMS 0 0 0 6490 111379.28125 0.8963132549739041 1 -0.0606880187988281 9 Unmodified _NLYPGNEGY_ ENSG00000102710|ENST00000350612|SUPT20H;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;nc|ENSG00000102710|Q8NEM7-3|SUPT20H 26.88365393820708 0.1891292719743517 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y 3 6 27.676 0.0 0.0 2.6989 0.0 0.0 0.0 632.2312436723927 632.2312436723927 11.222412206649466 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}Y 2.6989 + + 190 1 2.357 67509.9 1.0 2366 4131 6490 SUDHL4_400M_050219_1,6499 SUDHL4_400M_050219_1,6499,NLYPGNEGY False True NLYPGNEGY 34.10545 513.730883777142 1002887.5625 6490.0 nc|ENSG00000102710|Q8NEM7-3|SUPT20H;;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;;ENSG00000102710|ENST00000350612|SUPT20H 3.318273146947225 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6500 34.108 119.0 645010.0 25 0 62561.0 + + 7600 IEPADAHVL 9 105 482.75876836233147 0 482.7590209841728 PEAK CID FTMS 0 0 0 6490 280435.75 0.6027615436541387 -2 0.1349678039550781 10 Unmodified _EIPAFLFGA_ ENSG00000121579|ENST00000240922|NAA50;nc|ENSG00000121579|Q9GZZ1-2|NAA50 26.34127834903884 0.1435854383732919 5 SPVPSPD 7 -1 16.226 0.0 0.0 1.6841 0.0 0.0 199.09318262752907 82.06698023013905 281.1601628576681 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 SPVPSPD 1.6841 - 232 + 1 2.357 61933.1 1.0 2367 4131 6490 SUDHL4_400M_050219_1,6500 SUDHL4_400M_050219_1,6500,EIPAFLFGA False False IEPADAHVL 34.107927 482.759020984173 2140310.75 6490.0 ENSG00000121579|ENST00000240922|NAA50;;nc|ENSG00000121579|Q9GZZ1-2|NAA50 4.578479607899983 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6501 34.113 295.0 281900.0 25 0 26450.0 + 40871 VLQGKLAEV 9 126 478.7928860798895 955.571219226579 2 478.7925292849541 MULTI CID FTMS 0 0 0 6490 232032.890625 1.0 0 0.0 11 Unmodified _VLQGKLAEV_ ENSG00000127603|ENST00000564288|MACF1;ENST00000476350.1_1_1:39768622-39838291:+|nuORF;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1 36.12702656103203 0.0967173616627612 5 [{I|L}V]QGTQV{I|L}V 9 4 + 54.019 0.0 0.0 5.6531 5.6531 89.036 0.0 0.0 0.0 10.602802969692746 15.74107675716224 10.602802969692746 9.208187539523747 0 1.4419628234359578 2.0 0.6989700043360187 0.4247425010840047 [{I|L}V]QGTQV{I|L}V;[{I|L}V][AG]GTQV{I|L}V;[{I|L}V]QGT[AG]V{I|L}V;[{I|L}V]{[RE]|[WV]}EV{I|L}V;{[VA]|[{I|L}G]}AKGAEV{I|L}V;[{I|L}A]GKGAEV{I|L}V;{[VA]|[{I|L}G]}KAGAEV{I|L}V;{[VA]|[{I|L}G]}KQAEV{I|L}V;[Q{I|L}]KGAEV{I|L}V;{[VA]|[{I|L}G]}AVGTQV{I|L}V 5.6531;4.6894;4.6894;4.4339;4.3394;4.2401;4.0244;3.8401;3.7923;3.5246 -;-;-;-;-;-;-;-;-;- 991 1 2.357 65413.1 1.0 2368 4131 6490 SUDHL4_400M_050219_1,6501 SUDHL4_400M_050219_1,6501,VLQGKLAEV True True VLQGKLAEV 34.113317 478.792529284954 958169.5 6490.0 ENSG00000127603|ENST00000564288|MACF1;;nc|ENSG00000127603|Q9UPN3-2|MACF1;;nc|ENSG00000127603|Q9UPN3|MACF1;;nc|ENSG00000127603|Q9UPN3-3|MACF1;;ENST00000476350.1_1_1:39768622-39838291:+|nuORF;;nc|ENSG00000127603|Q9UPN3-5|MACF1;;nc|ENSG00000127603|Q9UPN3-4|MACF1 4.059945742289226 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6502 34.122 496.0 137380.0 25 0 11149.0 9392 FISEPYRY 8 119 537.7645329107286 1073.514512888257 2 537.7640258669853 MULTI CID FTMS 0 0 0 6490 124129.140625 0.1810269857934104 4 -0.1446914672851562 12 Unmodified _FISEPYRY_ ENSG00000137491|ENST00000289575|SLCO2B1;nc|ENSG00000137491|O94956-2|SLCO2B1;nc|ENSG00000137491|O94956-3|SLCO2B1 30.22481116460888 0.4082965392918993 5 {M(Oxidation (M))|F}{I|L}D[YR]{M(Oxidation (M))|F}{I|L} 7 5 46.961 0.0 0.0 4.3745 0.0 0.0 0.0 116.0510729425414 116.0510729425414 34.970847646527545 0.0 0.0 0.0 0 0.3807196863200844 0.638272163982407 0.3807196863200844 0.4247425010840047 {M(Oxidation (M))|F}{I|L}D[YR]{M(Oxidation (M))|F}{I|L} 4.3745 - 125 + 1 2.357 56363.2 1.0 2369 4131 6490 SUDHL4_400M_050219_1,6502 SUDHL4_400M_050219_1,6502,FISEPYRY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6503 34.136 800.0 75968.0 25 0 4074.9 -1 ISLKMNYVEC 10 110 608.2934448122978 0 608.2934448122978 PEAK CID FTMS 0 0 0 -1 0 13 Oxidation (M) _ISLKM(Oxidation (M))NYVEC_ L1MD_dup374|chr1:159061049-159061398:-|1.2573971330827678|0.0691446629960464|4.18|48.0|22|2|anti-sense 8.155526934196011 0.3888059682493408 5 {I|L}EP 3 -1 11.427 0.0 0.0 0.9408 0.0 0.0 285.05300182987054 587.3230684869749 872.3760703168455 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}EP 0.9408 - 26 + 1 2.357 49611.9 0.6499999761581421 2370 4131 6490 SUDHL4_400M_050219_1,6503 SUDHL4_400M_050219_1,6503,ISLKMNYVEC False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 6505 34.14 25.0 1183800.0 25 0 188890.0 + 35287 SSLVQVTTETI 11 46 589.3193540293499 1176.6241551254998 2 589.3195678591728 MULTI CID FTMS 0 0 0 6504 2073738.0 0.4550871133396762 2 -0.0781211853027343 1 Unmodified _SSLVQVTTETI_ REV__ENSG00000120549|ENST00000376454|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-3|KIAA1217 16.149105407346934 0.6992268271266642 5 V{I|L}V 3 -1 16.198 0.0 0.0 1.3766 0.0 0.0 563.2800800851185 299.1000155084594 862.3800955935778 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}V 1.3766 - 26 + 1 2.357 27776.6 1.0 2371 4132 6504 SUDHL4_400M_050219_1,6505 SUDHL4_400M_050219_1,6505,SSLVQVTTETI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6506 34.143 141.0 525680.0 25 0 39520.0 -1 0 80 918.4205074480134 1834.826461962827 2 918.9217407107352 MULTI CID FTMS 0 0 0 6504 743778.5 0.7996915862296236 2 -0.0781211853027343 2 5 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 56.988 0.0 0.0 3.1059 0.0 0.0 949.463871101079 0.0 949.463871101079 0.0 33.17532531436136 0.0 0.0 0 1.805462187404089 0.0 0.0 0.3807196863200844 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.1059 - 220 1 2.357 54263.0 1.0 2372 4132 6504 SUDHL4_400M_050219_1,6506 SUDHL4_400M_050219_1,6506, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6508 34.159 800.0 103550.0 25 0 7898.5 -1 DYQHFNVVEMY 11 119 730.8131199402623 1459.6116869473244 2 730.8129760622978 MULTI CID FTMS 0 0 0 6507 58879.33984375 0.6983386768921512 1 -0.0707778930664062 1 Oxidation (M) _DYQHFNVVEM(Oxidation (M))Y_ ENSG00000137843|ENST00000560346|PAK6;nc|ENSG00000137843|Q9NQU5-2|PAK6 4.897010918128616 0.8520435188433833 5 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 48.766 0.0 0.0 3.341 0.0 0.0 375.1651478498063 0.0 375.1651478498063 0.0 33.28131590713106 0.0 0.0 0 0.8182503180159344 0.0 0.3494850021680094 0.0 DEAQQNA{M(Oxidation (M))|F}Y 3.341 - 882 1 2.357 62027.4 0.5799999833106995 2373 4133 6507 SUDHL4_400M_050219_1,6508 SUDHL4_400M_050219_1,6508,DYQHFNVVEMY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6509 34.173 800.0 252090.0 25 0 14916.0 + 31110 RLLPKVQEV 9 182 541.3400184005703 1080.6654838679406 2 541.3396484255791 MULTI CID FTMS 0 0 0 6507 155900.9375 0.7357615372969997 -3 0.1412925720214843 2 Unmodified _RLLPKVQEV_ ENSG00000186193|ENST00000409687|SAPCD2 49.55428908609986 0.0413471690215031 5 {I|L}{I|L}RPKVQEV 9 2 + 77.501 0.0 0.0 7.1716 7.1716 92.775 0.0 0.0 0.0 24.43995199036464 38.90295939308448 24.43995199036464 9.208187539523747 0 1.3589755805267565 2.0 0.0 0.6109243748081782 {I|L}{I|L}RPKVQEV;{I|L}{I|L}RPKV[AG]EV;{I|L}{I|L}RG{I|L}K[PG]EV;[R{I|L}]{I|L}PKVQEV;{I|L}{I|L}A[RV]K[PG]EV;[R{I|L}]{I|L}PKV[AG]EV;[{I|L}P][R{I|L}]KVQEV;[{I|L}P][R{I|L}]KV[AG]EV;[R{I|L}]{I|L}G{I|L}K[PG]EV;[{I|L}A]{I|L}[RV]K[PG]EV 7.1716;6.3195;5.0217;4.393;4.181;3.5409;3.4594;2.6074;2.2432;1.6757 -;-;-;+;-;-;-;-;-;- + 1396 1 2.357 152922.7 0.6899999976158142 2374 4133 6507 SUDHL4_400M_050219_1,6509 SUDHL4_400M_050219_1,6509,RLLPKVQEV True True RLLPKVQEV 34.173173 541.339648425579 3096379.5 6507.0 ENSG00000186193|ENST00000409687|SAPCD2 4.979305108388265 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6510 34.179 335.0 231830.0 25 0 16012.0 -1 0 86 874.9054764860379 1747.7964000388756 2 875.4041625857353 MULTI CID FTMS 0 0 0 6507 142715.625 0.055989417314803 -34 0.908405303955078 3 5 WN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 7 -1 28.728 0.0 0.0 1.6437 0.0 0.0 862.4315113781493 0.0 862.4315113781493 0.0 1.7933880520907763 0.0 0.0 0 1.1237125054200234 0.0 0.0 0.0 WN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 1.6437 - 565 1 2.357 57632.8 1.0 2375 4133 6507 SUDHL4_400M_050219_1,6510 SUDHL4_400M_050219_1,6510, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6511 34.183 201.0 301700.0 25 0 21453.0 + 1045 AGFQVKAY 8 110 442.2381654447137 882.4617779562274 2 442.2371093630791 MULTI CID FTMS 0 0 0 6507 145338.46875 0.6495813532789477 1 -0.0707778930664062 4 Unmodified _AGFQVKAY_ chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-13|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-6|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 34.18733598223924 0.3315367612694167 5 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QVKAY 7 2 + 29.39 0.0 0.0 3.3305 3.3305 83.545 0.0 0.0 0.0 4.392200779062492 12.04119982655925 4.392200779062492 9.33053210369387 0 0.5 0.0 0.0 0.4247425010840047 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QVKAY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[AG]VKAY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QVKS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[AG]VKS{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[VP][PS]AW 3.3305;2.2731;1.966;0.90864;0.1299 -;-;-;-;- 131 + 1 2.357 53223.3 1.0 2376 4133 6507 SUDHL4_400M_050219_1,6511 SUDHL4_400M_050219_1,6511,AGFQVKAY False True AGFQVKAY 34.183112 442.237109363079 830918.5625 6507.0 nc|ENSG00000132185|Q7L513-3|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;nc|ENSG00000132185|Q7L513-6|FCRLA;;nc|ENSG00000132185|Q7L513-13|FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-8|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA 4.813650846481323 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6512 34.188 239.0 384660.0 25 0 64706.0 + 30409 RAYDGTTYL 9 106 530.2594939156643 1058.5044348981285 2 530.2601806521416 MULTI CID FTMS 0 0 0 6507 80487.640625 0.535819555860953 -2 0.0680313110351562 5 Unmodified _RAYDGTTYL_ ENSG00000168883|ENST00000323701|USP39;ENST00000459775.5_1_2:85848673-85875928:+|nuORF;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;nc|ENSG00000168883|Q53GS9-2|USP39;nc|ENSG00000168883|Q53GS9-3|USP39 22.736283301280096 0.2418982879461534 5 P{[YD]|[{M(Oxidation (M))|F}M]}TY{I|L} 6 4 34.117 0.0 0.0 3.2232 0.0 0.0 288.14009291816564 0.0 288.14009291816564 0.0 23.632900219968107 0.0 0.0 0 0.8494850021680094 0.0 0.9247425010840048 0.0 P{[YD]|[{M(Oxidation (M))|F}M]}TY{I|L} 3.2232 - 194 1 2.357 76443.2 1.0 2377 4133 6507 SUDHL4_400M_050219_1,6512 SUDHL4_400M_050219_1,6512,RAYDGTTYL False True RAYDGTTYL 34.187587 530.260180652142 1088529.75 6507.0 ENST00000459775.5_1_2:85848673-85875928:+|nuORF;;ENSG00000168883|ENST00000323701|USP39;;ENST00000493829.5_1_2:85843459-85872221:+|nuORF;;nc|ENSG00000168883|Q53GS9-2|USP39;;nc|ENSG00000168883|Q53GS9-3|USP39 4.244968096415202 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6513 34.201 800.0 100280.0 25 0 5619.7 + -1 KLSEELSGGRL 11 119 595.163036822331 0 594.8342773318291 PEAK CID FTMS 0 0 0 -1 0 6 3 Carbamidomethyl (C) _ASPC(Carbamidomethyl (C))C(Carbamidomethyl (C))GC(Carbamidomethyl (C))CCGD_ ENSG00000115091|ENST00000263238|ACTR3 0.3070304955306653 0.4761840153648598 5 {I|L}SEE{I|L} 5 -1 23.188 0.0 0.0 1.9513 0.0 0.0 128.7566723271455 485.2479342096313 614.0046065367768 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}SEE{I|L} 1.9513 - 46 + 1 2.357 64095.4 0.550000011920929 2378 4133 6507 SUDHL4_400M_050219_1,6513 SUDHL4_400M_050219_1,6513,ASPCCGCCCGD False False KLSEELSGGRL 34.201418 594.834277331829 365401.84375 6507.0 ENSG00000115091|ENST00000263238|ACTR3 1.069541613260905 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6514 34.206 179.0 309750.0 25 0 23285.0 + 1219 AIHPIPGEY 9 94 498.761063306077 995.507573678954 2 498.7610046267509 MULTI CID FTMS 0 0 0 6507 159829.109375 0.8651575403356392 -2 0.0680313110351562 7 Unmodified _AIHPIPGEY_ ENSG00000143603|ENST00000271915|KCNN3;nc|ENSG00000143603|Q9UGI6-2|KCNN3;nc|ENSG00000143603|Q9UGI6-3|KCNN3 18.13498045792455 0.3457906370836843 5 P{I|L}[WP]Y 5 5 23.244 0.0 0.0 2.3349 0.0 0.0 321.18049819160314 0.0 321.18049819160314 0.0 11.025684359364403 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 P{I|L}[WP]Y 2.3349 - 143 1 2.357 49686.6 1.0 2379 4133 6507 SUDHL4_400M_050219_1,6514 SUDHL4_400M_050219_1,6514,AIHPIPGEY False True AIHPIPGEY 34.206051 498.761004626751 906952.125 6507.0 nc|ENSG00000143603|Q9UGI6-3|KCNN3;;ENSG00000143603|ENST00000271915|KCNN3;;nc|ENSG00000143603|Q9UGI6-2|KCNN3 4.645637353261312 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6515 34.21 178.0 260620.0 25 0 24725.0 + 7979 ELVRIEKY 8 91 525.30327885625 1048.5920047793 2 525.3038818240166 MULTI CID FTMS 0 0 0 6507 160987.1875 1.0 0 0.0 8 Unmodified _ELVRIEKY_ REV__ENSG00000081148|ENST00000193391|IMPG2 15.847184025352805 0.6768015514314958 5 {I|L}{I|L}D[RK]{I|L}EY 8 -1 + 31.552 0.0 0.0 3.009 3.009 73.464 0.0 0.0 0.0 0.9691001300805624 7.607668156467255 0.9691001300805624 0.9691001300805624 0 0.5 1.6989700043360187 0.0 0.0 {I|L}{I|L}D[RK]{I|L}EY;{[QN]|[E{I|L}]|[KN]}V[RK]{I|L}EY;{[QN]|[E{I|L}]|[KN]}V[KG]V{I|L}EY;{I|L}{I|L}D[RK]E{I|L}Y;{[QN]|[E{I|L}]|[KN]}V[RK]E{I|L}Y;{[QN]|[E{I|L}]|[KN]}V[KG]VE{I|L}Y;{I|L}{I|L}D[RK]NKY;{[QN]|[E{I|L}]|[KN]}[RK]V{I|L}EY;{I|L}{I|L}D[KG]VNKY;{[QN]|[E{I|L}]|[KN]}V[RK]NKY 3.009;2.9166;2.8678;2.722;2.6295;2.5807;2.554;2.5371;2.5052;2.4616 -;-;-;-;-;-;-;-;-;- 267 1 2.357 42387.4 1.0 2380 4133 6507 SUDHL4_400M_050219_1,6515 SUDHL4_400M_050219_1,6515,ELVRIEKY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6516 34.214 228.0 329720.0 25 0 95133.0 -1 0 96 472.273134774577 471.265858307977 1 472.2729675173759 MULTI CID FTMS 0 0 0 6507 150830.71875 0.4511619194293725 -9 0.3959274291992187 9 5 Y 1 -1 10.596 0.0 0.0 2.2484 0.0 0.0 290.1925988859051 0.0 290.1925988859051 0.0 0.2173284689054533 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.2484 - 24 + 1 2.357 63285.0 1.0 2381 4133 6507 SUDHL4_400M_050219_1,6516 SUDHL4_400M_050219_1,6516, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6518 34.219 6.9 7291000.0 25 0 914960.0 38649 TTIKAFFPKK 10 72 394.2411026759341 1179.7014786280024 3 394.2414428591728 MULTI CID FTMS 0 0 0 6517 6243677.0 0.4870335431674528 2 -0.0457801818847656 1 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 32.78568957990786 0.2337485590374503 5 TT{I|L}KY{I|L}WKK 9 4 + 89.351 0.0 0.0 7.5741 7.5741 96.753 0.0 0.0 0.0 67.13283468773298 16.8348435778082 16.8348435778082 25.29612127939305 0 0.7302046884880937 1.5228787452803376 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK;TT{I|L}KY{I|L}[{I|L}V]{[ET]|[MV]} 7.5741;5.4298 -;- 152 + 1 2.357 50056.0 1.0 2382 4134 6517 SUDHL4_400M_050219_1,6518 SUDHL4_400M_050219_1,6518,TTIKAFFPKK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6519 34.22 9.2 6913800.0 25 0 1465200.0 + 14945 ILMEHIHKL 9 93 378.5546115961645 1132.6420053886936 3 378.5550414919853 MULTI CID FTMS 0 0 0 6517 4699325.5 0.3938403165656754 3 -0.0894012451171875 2 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 49.52724829834842 0.0414064571532091 5 {I|L}{I|L}MEH{I|L}H{I|L}K 9 2 + 81.836 0.0 0.0 7.2253 7.2253 96.181 0.0 0.0 0.0 46.259332119116046 11.075543018713802 11.075543018713802 27.26403468139864 0 0.6203715150305281 2.0 0.4247425010840047 0.2614393726401688 {I|L}{I|L}MEH{I|L}H{I|L}K;{I|L}{I|L}[YV]EQQ{I|L}K 7.2253;4.8182 -;- 390 + 1 2.357 57506.1 1.0 2383 4134 6517 SUDHL4_400M_050219_1,6519 SUDHL4_400M_050219_1,6519,ILMEHIHKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6521 34.225 132.0 376220.0 25 0 39506.0 + 25141 MQKEITAL 8 92 467.2572661654172 932.4999793976344 2 467.2574340701103 MULTI CID FTMS 0 0 0 6520 338753.4375 0.1223578755456947 -3 0.0840034484863281 1 Unmodified _MQKEITAL_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 20.453626601364224 0.6087503291685402 5 A{I|L} 2 6 21.198 0.0 0.0 2.2732 0.0 0.0 730.3679278613047 0.0 730.3679278613047 0.0 10.36043214641512 0.0 0.0 0 0.5 0.0 0.0 0.0 + A{I|L} 2.2732 + + 204 + 1 2.357 42693.0 1.0 2384 4135 6520 SUDHL4_400M_050219_1,6521 SUDHL4_400M_050219_1,6521,MQKEITAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6522 34.239 800.0 228000.0 25 0 26260.0 + 39613 VDNAYQCRSYD 11 138 667.275964046033 1332.537375158866 2 667.2756225466728 MULTI CID FTMS 0 0 0 6520 157499.3125 0.2398804971069048 -3 0.0840034484863281 2 Unmodified _VDNAYQCRSYD_ REV__ENSG00000152990|ENST00000334304|ADGRA3;REV__ENST00000591780.1_1_18:12075195-12075588:-|nuORF;REV__nc|ENSG00000152990|Q8IWK6-2|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-3|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-4|ADGRA3 15.248480904072842 0.7179608125786238 5 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 80.275 0.0 0.0 6.0242 0.0 0.0 248.0913868634781 0.0 248.0913868634781 0.0 54.96021112422629 0.0 0.0 0 1.1822333069283657 0.0 1.329689690656103 1.2302046884880935 DEAQQNA{M(Oxidation (M))|F}Y 6.0242 - 3913 1 2.357 135167.3 0.7699999809265137 2385 4135 6520 SUDHL4_400M_050219_1,6522 SUDHL4_400M_050219_1,6522,VDNAYQCRSYD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6523 34.253 800.0 221560.0 25 0 19715.0 + -1 QNQYELFMEVM 11 146 732.31307621608 1462.61159949896 2 732.8106567263603 MULTI CID FTMS 0 0 0 6520 144544.0 0.0505522419040048 -22 0.7667884826660156 3 2 Oxidation (M) _QNQYELFM(Oxidation (M))EVM(Oxidation (M))_ REV__ENSG00000152253|ENST00000282074|SPC25;REV__ENST00000479309.6_1_2:169690730-169745796:-|nuORF 13.042465956692816 0.7638483625850725 5 [AG]NHDEAQAGAN 12 -1 102.4 0.0 0.0 7.0013 0.0 0.0 0.0 324.1231132414188 324.1231132414188 73.68612166428473 0.0 0.0 0.0 0 0.6139829889124311 1.3979400086720375 0.8851518780601924 2.0858317385287872 [AG]NHDEAQAGAN 7.0013 - 28671 1 2.357 125469.2 0.7099999785423279 2386 4135 6520 SUDHL4_400M_050219_1,6523 SUDHL4_400M_050219_1,6523,QNQYELFMEVM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6524 34.26 396.0 342890.0 25 0 26409.0 37827 TLTKHKIIHTD 11 151 436.255515541943 1305.744717226029 3 436.2555724978447 MULTI CID FTMS 0 0 0 6520 135515.46875 0.5374722649614281 -1 0.0058822631835937 4 Unmodified _TLTKHKIIHTD_ ENSG00000196268|ENST00000392288|ZNF493;nc|ENSG00000196268|Q6ZR52|ZNF493 15.538449434065043 0.7119291465483839 5 TT{I|L}KY{I|L} 6 7 68.99 0.0 0.0 5.2835 0.0 0.0 0.0 583.298815427867 583.298815427867 53.14835015492783 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.4247425010840047 0.4247425010840047 TT{I|L}KY{I|L} 5.2835 - 567 + 1 2.357 113983.5 1.0 2387 4135 6520 SUDHL4_400M_050219_1,6524 SUDHL4_400M_050219_1,6524,TLTKHKIIHTD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6526 34.267 266.0 245570.0 25 0 21094.0 -1 ALMCEDALV 9 110 511.23638146904335 1020.4582100048868 2 511.2380554080009 MULTI CID FTMS 0 0 0 6525 112531.328125 0.8529129942897976 1 -0.0436210632324218 1 Carbamidomethyl (C) _ALMC(Carbamidomethyl (C))EDALV_ ENSG00000129673|ENST00000392492|AANAT;nc|ENSG00000129673|Q16613-2|AANAT 18.13498045792455 0.3457906370836843 5 [{I|L}A]A{M(Oxidation (M))|F}AVE 7 -1 50.762 0.0 0.0 4.9745 0.0 0.0 0.0 316.0438021295532 316.0438021295532 35.54576644454535 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}A]A{M(Oxidation (M))|F}AVE 4.9745 - 159 + 1 2.357 52969.2 1.0 2388 4136 6525 SUDHL4_400M_050219_1,6526 SUDHL4_400M_050219_1,6526,ALMCEDALV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6527 34.272 280.0 316420.0 25 0 97573.0 + 22983 LSGLVHWQ 8 101 470.2574518223457 0 470.2566100955009 PEAK CID FTMS 0 0 0 6525 106328.8984375 0.3025968131562535 -5 0.1845893859863281 2 Unmodified _LSGLVHWQ_ REV__chr2:223951621-223959534|12|13.0|0.07|7.49|+|1|TE_info:AluSz,AluSz_dup15457,Alu,SINE,donor,-,223951479,223951621|None,MRPL44|1 9.347437153973935 0.5488964601725408 5 {I|L} 1 -1 6.9897 0.0 0.0 0.74477 0.0 0.0 297.0421120413727 525.3526095025999 822.3947215439725 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.74477 + + 12 + 1 2.357 74104.4 1.0 2389 4136 6525 SUDHL4_400M_050219_1,6527 SUDHL4_400M_050219_1,6527,LSGLVHWQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6528 34.275 169.0 584710.0 25 0 55820.0 + 34477 SMLEDVQRA 9 98 524.7581010568491 1047.501649180498 2 524.7585327029228 MULTI CID FTMS 0 0 0 6525 298211.15625 0.095595167447569 -3 0.1165580749511718 3 Unmodified _SMLEDVQRA_ ENSG00000106344|ENST00000223073|RBM28 38.17557092003332 0.0854718145212029 5 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}EDVQ 7 2 67.721 0.0 0.0 6.465 0.0 0.0 0.0 242.12709985904533 242.12709985904533 39.81630743656815 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.3252574989159953 + {[MS]|[{M(Oxidation (M))|F}A]}{I|L}EDVQ 6.465 + + 282 + 1 2.357 80725.6 1.0 2390 4136 6525 SUDHL4_400M_050219_1,6528 SUDHL4_400M_050219_1,6528,SMLEDVQRA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6529 34.289 800.0 200410.0 25 0 12399.0 + 18423 KVYDPVSEY 9 164 550.268625720318 1098.522698507436 2 550.2687255740166 MULTI CID FTMS 0 0 0 6525 117298.59375 0.1789937944640584 -3 0.1165580749511718 4 Unmodified _KVYDPVSEY_ ENSG00000063601|ENST00000445323|MTMR1;nc|ENSG00000063601|Q13613-2|MTMR1;nc|ENSG00000063601|Q13613|MTMR1 61.60191391372663 0.0251951588191061 5 {M(Oxidation (M))|F}DPVSEY 7 3 64.686 0.0 0.0 5.8885 0.0 0.0 243.19449050117345 0.0 243.19449050117345 0.0 49.56039241844695 0.0 0.0 0 1.4634679910804405 0.0 1.174742501084005 0.0 {M(Oxidation (M))|F}DPVSEY 5.8885 - 1008 1 2.357 125577.6 0.6000000238418579 2391 4136 6525 SUDHL4_400M_050219_1,6529 SUDHL4_400M_050219_1,6529,KVYDPVSEY True True KVYDPVSEY 34.289285 550.268725574017 7283765.0 6525.0 ENSG00000063601|ENST00000445323|MTMR1;;nc|ENSG00000063601|Q13613-2|MTMR1;;nc|ENSG00000063601|Q13613|MTMR1 7.172942161560059 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6530 34.303 800.0 344200.0 25 0 12232.0 -1 0 160 910.9156306721646 1819.8167084111287 2 910.9167968630792 MULTI CID FTMS 0 0 0 6525 190398.46875 0.207676887232193 -8 0.3990020751953125 5 5 [NP]{I|L}NHQC(Carbamidomethyl (C))KEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 95.968 0.0 0.0 5.2735 5.2735 79.897 0.0 0.0 0.0 1.4612803567823818 0.9497551323085672 0.9497551323085672 1.4612803567823818 0 1.6791746928241125 0.8538719643217619 1.1307196863200843 1.425833702434617 [NP]{I|L}NHQC(Carbamidomethyl (C))KEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]QNHQC(Carbamidomethyl (C))KEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]GANHQC(Carbamidomethyl (C))KEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]VQHQC(Carbamidomethyl (C))KEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]V{M(Oxidation (M))|F}YTA[QA]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]NQHQC(Carbamidomethyl (C))KEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]N{M(Oxidation (M))|F}YTA[QA]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGHQC(Carbamidomethyl (C))KEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NHQC(Carbamidomethyl (C))KEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NHQC(Carbamidomethyl (C))KEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 5.2735;5.1932;5.0124;4.8894;4.8624;4.8091;4.7821;4.7772;4.7772;4.7772 -;-;-;-;-;-;-;-;-;- 24229 1 2.357 179524.9 0.7699999809265137 2392 4136 6525 SUDHL4_400M_050219_1,6530 SUDHL4_400M_050219_1,6530, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6532 34.308 128.0 437850.0 25 0 45917.0 + 14948 ILMEHIHKL 9 82 567.328649860913 1132.6427467886258 2 567.3291503787041 MULTI CID FTMS 0 0 0 6531 298669.53125 0.1084156697678272 6 -0.2224464416503906 1 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 42.83518252547288 0.0598927335801051 5 {I|L}{I|L}MEH{I|L}H{I|L}K 9 2 + 90.065 0.0 0.0 7.9517 7.9517 98.319 0.0 0.0 0.0 72.64190937653879 10.590992953673537 10.590992953673537 86.74239447289442 0 1.579689690656103 2.0 0.4247425010840047 0.0 {I|L}{I|L}MEH{I|L}H{I|L}K;[MT][{I|L}V]{I|L}[C(Carbamidomethyl (C))R]K{I|L} 7.9517;0.29332 -;- 265 + 1 2.357 51522.6 1.0 2393 4137 6531 SUDHL4_400M_050219_1,6532 SUDHL4_400M_050219_1,6532,ILMEHIHKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6533 34.314 310.0 306010.0 25 0 22954.0 -1 0 92 925.4288525731793 1848.8431522131584 2 925.429736316204 MULTI CID FTMS 0 0 0 6531 237070.84375 0.5192445688628492 -4 0.1601791381835937 2 5 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 55.121 0.0 0.0 2.9814 2.9814 83.905 0.0 0.0 0.0 3.768411687748099 33.6688190037372 3.768411687748099 13.57840941039747 0 0.9247425010840048 0.0 0.0 0.7614393726401688 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEPQQN[DV] 2.9814;2.247;1.9858 -;-;- 482 1 2.357 66562.3 1.0 2394 4137 6531 SUDHL4_400M_050219_1,6533 SUDHL4_400M_050219_1,6533, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6534 34.317 140.0 295640.0 25 0 15604.0 + 38360 TQPDLPATTY 10 84 553.7722525798828 1105.5299522265657 2 553.7721435427666 MULTI CID FTMS 0 0 0 6531 162844.828125 0.6244949231511414 -5 0.1675224304199218 3 Unmodified _TQPDLPATTY_ ENSG00000168411|ENST00000361070|RFWD3 17.11289562659939 0.5604042439455784 5 TY 2 8 22.717 0.0 0.0 2.0548 0.0 0.0 823.4085971013686 0.0 823.4085971013686 0.0 13.50833760139686 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + TY 2.0548 + + 63 + 1 2.357 40056.5 1.0 2395 4137 6531 SUDHL4_400M_050219_1,6534 SUDHL4_400M_050219_1,6534,TQPDLPATTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6535 34.331 800.0 246070.0 25 0 17691.0 + 17930 KQVMEGRVTF 10 151 597.8188316118378 0 597.8190795779228 PEAK CID FTMS 0 0 0 6531 157978.125 0.5004865470170544 -2 0.0835189819335937 4 Unmodified _KQVMEGRVTF_ ENSG00000103365|ENST00000309859|GGA2 55.46699784157472 0.0304892652642101 5 QVME 4 6 49.769 0.0 0.0 4.1696 0.0 0.0 128.09572639197592 575.2952851980613 703.3910115900371 0.0 0.0 0.0 0.0 0 1.4291746928241125 0.0 1.274227503252014 0.3807196863200844 + QVME 4.1696 + + 277 + 1 2.357 145818.7 0.7200000286102295 2396 4137 6531 SUDHL4_400M_050219_1,6535 SUDHL4_400M_050219_1,6535,KQVMEGRVTF True True KQVMEGRVTF 34.330659 597.819079577923 1867084.0 6531.0 ENSG00000103365|ENST00000309859|GGA2 5.005871136983235 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6536 34.337 375.0 246020.0 25 0 18229.0 + 44346 YLQDYTDRV 9 100 586.7831924653091 1171.551831997418 2 586.7831298708916 MULTI CID FTMS 0 0 0 6531 102429.2734375 0.8302969626625136 -1 0.0436210632324218 5 Unmodified _YLQDYTDRV_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 40.23920728925047 0.0741434193262949 5 Y{I|L}QDYTD[RV] 9 0 + 85.64 0.0 0.0 7.31 7.31 93.057 0.0 0.0 0.0 74.4028219670956 4.762036441594191 4.762036441594191 9.208187539523747 0 0.7742275032520141 2.0 0.4247425010840047 0.3807196863200844 + + Y{I|L}QDYTD[RV];Y{I|L}[AG]DYTD[RV];Y{I|L}V[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]TD[RV];Y{I|L}QDY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VP];Y{I|L}QDC[Y{I|L}][RV];Y{I|L}[AG]DY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[VP];Y{I|L}[AG]DC[Y{I|L}][RV];Y{I|L}V[DN]YM[RV];Y{I|L}Q{[CP]|[EA]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[RV];Y{I|L}Q{[MS]|[{M(Oxidation (M))|F}A]}[{M(Oxidation (M))|F}E][RV] 7.31;6.524;5.7361;5.6523;5.502;4.8663;4.716;4.5782;4.4726;4.2832 +;-;-;-;-;-;-;-;-;- + 286 + 1 2.357 71625.6 1.0 2397 4137 6531 SUDHL4_400M_050219_1,6536 SUDHL4_400M_050219_1,6536,YLQDYTDRV True True YLQDYTDRV 34.337407 586.783129870892 662937.5 6531.0 ENST00000470585.5_1_1:38445118-38455637:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 8.172527949015299 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6537 34.349 654.0 259450.0 25 0 17558.0 + 37405 TLAPVPSIR 9 155 477.2927396543278 952.5709263754557 2 477.2926208376884 MULTI CID FTMS 0 0 0 6531 93854.7421875 0.027708303195741 54 -1.6802406311035156 6 Unmodified _TLAPVPSIR_ REV__ENST00000492278.5_1_9:140356016-140356520:-|nuORF 27.628801355627647 0.1796483985696185 5 {I|L}TAP 4 -1 45.948 0.0 0.0 4.8236 0.0 0.0 0.0 567.3268949625577 567.3268949625577 17.49277727510455 0.0 0.0 0.0 0 0.6307196863200843 1.5228787452803376 0.0 0.0 {I|L}TAP 4.8236 - 288 + 1 2.357 134283.1 1.0 2398 4137 6531 SUDHL4_400M_050219_1,6537 SUDHL4_400M_050219_1,6537,TLAPVPSIR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6538 34.363 800.0 210670.0 25 0 14338.0 + -1 LCEKYMRCFY 10 147 743.3224187638687 1484.6302845945372 2 743.3249999880791 MULTI CID FTMS 0 0 0 6531 82403.8671875 0.1684430297319168 -6 0.22821044921875 7 2 Carbamidomethyl (C),Oxidation (M) _LC(Carbamidomethyl (C))EKYM(Oxidation (M))RC(Carbamidomethyl (C))FY_ REV__ENSG00000169519|ENST00000407364|METTL15;REV__nc|ENSG00000169519|A6NJ78-2|METTL15;REV__nc|ENSG00000169519|A6NJ78-3|METTL15;REV__nc|ENSG00000169519|A6NJ78-4|METTL15;REV__nc|ENSG00000174912|P0C7V9|METTL15P1 10.073929032068715 0.6785112666868882 5 {[QG]|[NA]}GAMAEAQQNA[Y{M(Oxidation (M))|F}] 14 -1 + 77.872 0.0 0.0 5.2452 5.2452 83.474 0.0 0.0 0.0 2.223212804625092 52.50086613021075 2.223212804625092 4.511034388851243 0 0.7742275032520141 0.8860566476931632 0.0 1.7658715643802767 {[QG]|[NA]}GAMAEAQQNA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}QMAEAQQNA[Y{M(Oxidation (M))|F}];{[QN]|[E{I|L}]|[KN]}AMAEAQQNA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}AGMAEAQQNA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}G{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQNA[Y{M(Oxidation (M))|F}];[NP]{I|L}NCCAQQNA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}GAMCPAQQNA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}GAMAEAQQGGA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}GAMAEA[AG]QNA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}GAMAEAQ[AG]NA[Y{M(Oxidation (M))|F}] 5.2452;4.9414;4.9213;4.8278;4.748;4.6959;4.676;4.6356;4.6356;4.6356 -;-;-;-;-;-;-;-;-;- 4069 1 2.357 118738.8 0.5699999928474426 2399 4137 6531 SUDHL4_400M_050219_1,6538 SUDHL4_400M_050219_1,6538,LCEKYMRCFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6540 34.367 81.0 514740.0 25 0 40322.0 + 23211 LSSPVTKSF 9 74 483.2691095674673 964.5236662017346 2 483.2693969607353 MULTI CID FTMS 0 0 0 6539 370846.96875 0.4130440669329542 3 -0.1322593688964843 1 Unmodified _LSSPVTKSF_ nc|ENSG00000211592|P01834|IGKC 32.78568957990786 0.1150597335874693 5 {[WT]|[RM]}PVT[KS]{M(Oxidation (M))|F} 8 3 + 37.396 0.0 0.0 3.8771 3.8771 82.761 0.0 0.0 0.0 6.989700043360188 9.161231711705891 6.989700043360188 9.161231711705891 0 0.5 0.0 0.0 0.0 {[WT]|[RM]}PVT[KS]{M(Oxidation (M))|F};{[TV]|[{I|L}S]}Q[{I|L}A]S{M(Oxidation (M))|F}S{I|L};{[TV]|[{I|L}S]}[KP]SS{M(Oxidation (M))|F}S{I|L};[DV]{[VA]|[{I|L}G]}VT[KS]{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[AG][{I|L}A]S{M(Oxidation (M))|F}S{I|L};[DV][R{I|L}]T[KS]{M(Oxidation (M))|F};[KT][VP]SS{M(Oxidation (M))|F}S{I|L};[PS][K{I|L}]SS{M(Oxidation (M))|F}S{I|L};[VP][KT]SS{M(Oxidation (M))|F}S{I|L};{[QS]|[NT]}{I|L}[{I|L}A]S{M(Oxidation (M))|F}S{I|L} 3.8771;2.9273;2.6152;2.6047;1.9726;1.9331;1.4443;1.3193;1.2928;1.2617 -;-;-;-;-;-;-;-;-;- 139 + 1 2.357 42534.6 1.0 2400 4138 6539 SUDHL4_400M_050219_1,6540 SUDHL4_400M_050219_1,6540,LSSPVTKSF True False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 6541 34.369 79.0 634500.0 25 0 58018.0 10053 FPRDVAQAL 9 70 508.7800175004863 1015.5454820677726 2 508.7802307009697 MULTI CID FTMS 0 0 0 6539 630348.0625 0.569053464423216 -11 0.5108375549316406 2 Unmodified _FPRDVAQAL_ ENSG00000154027|ENST00000354567|AK5;ENST00000317704.8_1_1:77747869-77779575:+|nuORF;ENST00000466114.1_1_1:77759479-77763674:+|nuORF;ENST00000524494.1_1_1:77763548-77806259:+|nuORF;nc|ENSG00000154027|Q9Y6K8-3|AK5 15.847184025352805 0.4077185912009129 5 {M(Oxidation (M))|F}PTGAR[PS]A{I|L} 10 6 + 39.953 0.0 0.0 3.9342 3.9342 81.085 0.0 0.0 0.0 20.9568378181978 0.0438696215375244 0.0438696215375244 6.532125137753432 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}PTGAR[PS]A{I|L};{M(Oxidation (M))|F}PTQR[PS]A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[{M(Oxidation (M))|F}V]R[PS]A{I|L} 3.9342;3.2909;0.87547 -;-;- 72 + 1 2.357 55219.6 1.0 2401 4138 6539 SUDHL4_400M_050219_1,6541 SUDHL4_400M_050219_1,6541,FPRDVAQAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6542 34.371 76.0 683450.0 25 0 76698.0 + 12074 GQFPGHNEF 9 78 516.7305607301898 1031.4465685271796 2 516.7307617068291 MULTI CID FTMS 0 0 0 6539 478783.40625 0.5600630867777674 -2 0.1029205322265625 3 Unmodified _GQFPGHNEF_ ENSG00000163171|ENST00000295324|CDC42EP3 26.268140514670165 0.1969607489560049 5 {[{M(Oxidation (M))|F}D]|MM}[WP]GP{M(Oxidation (M))|F} 7 6 28.706 0.0 0.0 2.7831 0.0 0.0 0.0 182.05705638730595 182.05705638730595 12.600453850821363 0.0 0.0 0.0 0 0.8807196863200843 1.2218487496163564 0.4247425010840047 0.0 {[{M(Oxidation (M))|F}D]|MM}[WP]GP{M(Oxidation (M))|F} 2.7831 - 199 1 2.357 47870.9 1.0 2402 4138 6539 SUDHL4_400M_050219_1,6542 SUDHL4_400M_050219_1,6542,GQFPGHNEF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6543 34.373 108.0 612930.0 25 0 166950.0 + 20711 LLSAEPVPA 9 92 448.7581444757428 895.5017360182856 2 448.7579528689384 MULTI CID FTMS 0 0 0 6539 466893.1875 0.0144947269810504 -7 0.2875099182128906 4 Unmodified _LLSAEPVPA_ ENSG00000007312|ENST00000006750|CD79B;ENST00000558969.1_1_17:62008689-62009627:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B 44.40701690623563 0.0526327925666318 5 {I|L}{I|L}SAEP 6 3 25.938 0.0 0.0 2.8964 0.0 0.0 0.0 282.1453877118981 282.1453877118981 4.166572012004561 0.0 0.0 0.0 0 0.25 1.6989700043360187 0.6694451763165201 0.0 + {I|L}{I|L}SAEP 2.8964 + + 236 1 2.357 54636.4 1.0 2403 4138 6539 SUDHL4_400M_050219_1,6543 SUDHL4_400M_050219_1,6543,LLSAEPVPA True True LLSAEPVPA 34.373063 448.757952868938 164159456.0 6539.0 ENSG00000007312|ENST00000006750|CD79B;;nc|ENSG00000007312|P40259-2|CD79B;;ENST00000558969.1_1_17:62008689-62009627:-|nuORF 3.859525283177694 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6544 34.377 211.0 372500.0 25 0 27691.0 + + 24094 KLHGVNINV 9 124 497.2957418003654 992.5769306675307 2 497.2962219119072 MULTI CID FTMS 0 0 0 6539 284416.0 0.1582066141969237 -4 0.1487007141113281 5 Unmodified _LYIMKLNV_ ENSG00000173914|ENST00000310046|RBM4B;nc|ENSG00000173933|Q9BWF3-4|RBM4;ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4 32.116972079565 0.368454113111938 5 [VG]NH{I|L}K{I|L}NV 9 -1 + 42.767 0.0 0.0 4.3087 4.3087 80.289 0.0 0.0 0.0 5.740400872117206 24.64921584851684 5.740400872117206 4.2596873227228045 0 0.7742275032520141 1.3979400086720375 0.0 0.4247425010840047 [VG]NH{I|L}K{I|L}NV;[VG]GGH{I|L}K{I|L}NV;[VG]NH{I|L}K{I|L}GGV;{[NV]|[RG]}GH{I|L}K{I|L}NV;[VG]GGH{I|L}K{I|L}GGV;[K{I|L}]H[VG]N{I|L}NV;[K{I|L}]M[Y{I|L}]{I|L}NV;{[NV]|[RG]}GH{I|L}K{I|L}GGV;[VG]N{I|L}{I|L}[HK]NV;[K{I|L}]H[VG]N{I|L}GGV 4.3087;3.8796;3.381;3.2209;2.9562;2.8621;2.5127;2.2932;2.0413;1.9344 -;-;-;-;-;-;-;-;-;- 320 1 2.357 63901.5 1.0 2404 4138 6539 SUDHL4_400M_050219_1,6544 SUDHL4_400M_050219_1,6544,LYIMKLNV False False KLHGVNINV 34.377053 497.296221911907 15918393.0 6539.0 ENSG00000173914|ENST00000310046|RBM4B;;nc|ENSG00000173933|Q9BWF3-4|RBM4;;ENSG00000173933|ENST00000310092|RBM4;;nc|ENSG00000173933|Q9BWF3-3|RBM4;;nc|ENSG00000173933|Q9BWF3-2|RBM4 5.756968021392822 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6545 34.381 220.0 321370.0 25 0 26739.0 + 2996 AVIKIQSSY 9 118 504.7899094154334 1007.5652658976668 2 504.7900268435478 MULTI CID FTMS 0 0 0 6539 274919.71875 0.9165285221537542 -1 0.0592994689941406 6 Unmodified _AVIKIQSSY_ ENSG00000066279|ENST00000367409|ASPM 69.10491478415734 0.0214449631113747 5 {[VA]|[{I|L}G]}{I|L}K{I|L}QSSY 9 0 + 89.234 0.0 0.0 8.8564 8.8564 94.412 0.0 0.0 0.0 75.2934897833748 14.973024840566453 14.973024840566453 9.208187539523736 0 1.5138793319624575 2.0 1.0941876774005248 0.0 + + {[VA]|[{I|L}G]}{I|L}K{I|L}QSSY;{[VA]|[{I|L}G]}{I|L}K{I|L}[AG]SSY;{[VA]|[{I|L}G]}{I|L}K{I|L}Q[HC]P;{[VA]|[{I|L}G]}{I|L}K{I|L}[AG][HC]P 8.8564;7.9425;4.9063;3.9924 +;-;-;- + 387 + 1 2.357 57455.0 1.0 2405 4138 6539 SUDHL4_400M_050219_1,6545 SUDHL4_400M_050219_1,6545,AVIKIQSSY True True AVIKIQSSY 34.381201 504.790026843548 1578853.375 6539.0 ENSG00000066279|ENST00000367409|ASPM 6.47357447942098 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6546 34.389 450.0 228270.0 25 0 20115.0 + 2365 AQLRNLEAY 9 133 539.2883203473962 1076.5620877615922 2 539.2885009646416 MULTI CID FTMS 0 0 0 6539 220063.40625 1.0 0 0.0 7 Unmodified _AQLRNLEAY_ ENSG00000130810|ENST00000253107|PPAN;nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN 43.77239144664712 0.0547478964384323 5 [QA]{I|L}RN{I|L}EAY 9 0 + 49.975 0.0 0.0 4.6421 4.6421 85.956 0.0 0.0 0.0 4.809765241382493 29.060844849321068 4.809765241382493 9.208187539523747 0 1.742992819099939 0.0 0.4247425010840047 0.6747425010840047 + + [QA]{I|L}RN{I|L}EAY;[QA]{I|L}RGG{I|L}EAY;{[QV]|[N{I|L}]|[RA]|[KV]}[Q{I|L}]N{I|L}EAY;[{I|L}P]P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}EAY;{NN|[MP]|[D{I|L}]|[EV]}VV[VG]{I|L}EAY;{[QV]|[N{I|L}]|[RA]|[KV]}[Q{I|L}]GG{I|L}EAY;{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]{[VA]|[{I|L}G]}{I|L}EAY;[QA]{I|L}[KP]{[WT]|[RM]}AY;{[QN]|[E{I|L}]|[KN]}[{I|L}A][VG]{I|L}EAY;{[CP]|[EA]}{I|L}{I|L}[VG]{I|L}EAY 4.6421;3.7867;3.7605;3.5853;3.0142;2.9052;2.7346;2.7086;2.6461;2.5154 +;-;-;-;-;-;-;-;-;- + 448 1 2.357 83273.3 1.0 2406 4138 6539 SUDHL4_400M_050219_1,6546 SUDHL4_400M_050219_1,6546,AQLRNLEAY True True AQLRNLEAY 34.389205 539.288500964642 1174945.375 6539.0 nc|ENSG00000130810|Q9NQ55-2|PPAN;;nc|ENSG00000130810|Q9NQ55-3|PPAN;;ENSG00000130810|ENST00000253107|PPAN 5.924388249715169 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6547 34.396 376.0 304290.0 25 0 101400.0 + 17225 KLLGKVTIA 9 116 471.8212011388574 941.6278493445147 2 471.8211852908134 MULTI CID FTMS 0 0 0 6539 183121.5 1.0 0 0.0 8 Unmodified _KLLGKVTIA_ ENSG00000184260|ENST00000331380|H2AC20;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 24.99096001346401 0.2132109383330889 5 G{I|L}{I|L}RTK[{I|L}A] 8 5 28.709 0.0 0.0 3.0489 0.0 0.0 71.07432753730625 0.0 71.07432753730625 0.0 15.945071899598595 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.0 G{I|L}{I|L}RTK[{I|L}A] 3.0489 - 465 1 2.357 91937.7 1.0 2407 4138 6539 SUDHL4_400M_050219_1,6547 SUDHL4_400M_050219_1,6547,KLLGKVTIA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6548 34.401 266.0 421150.0 25 0 30715.0 + 12203 GQPQPGFGY 9 122 475.2158537108714 948.4171544885428 2 475.7217590212822 MULTI CID FTMS 0 0 0 6539 156482.34375 0.0548199796880443 -10 0.501922607421875 9 Unmodified _GQSSNPVSSS_ ENSG00000141367|ENST00000269122|CLTC 9.38312468134398 0.6832340498775793 5 {[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}[HT]PW 7 9 + 18.459 0.0 0.0 1.9463 1.9463 72.386 0.0 0.0 0.0 1.1605394320590712 1.1817372752379889 1.1605394320590712 1.1817372752379889 0 0.0 0.0 0.2887254899964357 0.0 {[{M(Oxidation (M))|F}D]|MM}{M(Oxidation (M))|F}[HT]PW;[QP][WQ]{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[PG]{M(Oxidation (M))|F}[HT]{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QG]|[NA]}[HS][PG]{M(Oxidation (M))|F}GY;{[QG]|[NA]}[YN]QGPW;[PG]A[WQ]{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QG]|[NA]}[HS][HT]PW;[AG]P[WQ]{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QG]|[NA]}[YN]QPGW;{[QG]|[NA]}[YN][AG]GPW 1.9463;1.8217;1.6024;1.3013;1.1799;0.98053;0.96253;0.79824;0.35939;0.20328 -;-;-;-;-;-;-;-;-;- 553 + 1 2.357 93632.4 1.0 2408 4138 6539 SUDHL4_400M_050219_1,6548 SUDHL4_400M_050219_1,6548,GQSSNPVSSS False False GQPQPGFGY 34.400857 475.721759021282 3143594.0 6539.0 ENSG00000141367|ENST00000269122|CLTC 5.123616377512614 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6549 34.409 440.0 217490.0 25 0 17949.0 38652 TTIKAFFPKK 10 110 590.8581749647277 1179.701796996255 2 590.8582031130791 MULTI CID FTMS 0 0 0 6539 141555.09375 0.0452588160393646 7 -0.1912040710449218 10 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 36.506200033944 0.1944608063770638 5 {[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK 9 4 + 69.689 0.0 0.0 5.9074 5.9074 93.726 0.0 0.0 0.0 52.14964095499696 16.52249673628745 16.52249673628745 60.73715399153174 0 1.9802046884880933 0.0 0.0 0.3054621874040891 {[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK;[Y{I|L}]WK{I|L}{[DS]|[MA]|[CV]|TT}KK;[Y{I|L}]WK{I|L}K{[DS]|[MA]|[CV]|TT}K;[Y{I|L}][H{I|L}][{I|L}P]K{I|L}[PS];[Y{I|L}]WKK{I|L}{[DS]|[MA]|[CV]|TT}K 5.9074;0.75886;0.48429;0.41966;0.37838 -;-;-;-;- 294 + 1 2.357 74223.7 1.0 2409 4138 6539 SUDHL4_400M_050219_1,6549 SUDHL4_400M_050219_1,6549,TTIKAFFPKK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6550 34.416 380.0 277060.0 25 0 20744.0 + 10223 FQKVITEY 8 137 514.2776306807158 1026.5407084282317 2 514.2776367068291 MULTI CID FTMS 0 0 0 6539 145073.0625 0.9409151547654228 -2 0.1029205322265625 11 Unmodified _FQKVITEY_ ENSG00000197157|ENST00000354725|SND1;ENST00000489417.5_1_7:127726971-127732107:+|nuORF 26.88365393820708 0.4786498634179528 5 {[QN]|[E{I|L}]|[KN]}TG{I|L}[KG][Y{M(Oxidation (M))|F}] 9 6 + 28.019 0.0 0.0 2.7294 2.7294 72.73 0.0 0.0 0.0 0.7608815858215543 0.915149811213496 0.7608815858215543 0.7608815858215543 0 0.0 0.8239087409443188 0.7059771852360797 0.0 {[QN]|[E{I|L}]|[KN]}TG{I|L}[KG][Y{M(Oxidation (M))|F}];{I|L}{I|L}SKEQ[Y{M(Oxidation (M))|F}];{[SA]|[TG]}E{I|L}{I|L}[KG][Y{M(Oxidation (M))|F}];[{I|L}T]EG{I|L}[KG][Y{M(Oxidation (M))|F}];{[ET]|[MV]}G{I|L}{I|L}[KG][Y{M(Oxidation (M))|F}];{[ET]|[MV]}{I|L}G{I|L}[KG][Y{M(Oxidation (M))|F}];[{I|L}V]TKEQ[Y{M(Oxidation (M))|F}];{I|L}{I|L}S{[TV]|[{I|L}S]}GQ[Y{M(Oxidation (M))|F}];{I|L}{I|L}SK{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EY;{I|L}{I|L}{[WT]|[RM]}GQ[Y{M(Oxidation (M))|F}] 2.7294;2.6553;2.5459;2.3744;2.3391;2.3299;2.0167;1.9953;1.9055;1.8787 -;-;-;-;-;-;-;-;-;- 673 1 2.357 83232.7 1.0 2410 4138 6539 SUDHL4_400M_050219_1,6550 SUDHL4_400M_050219_1,6550,FQKVITEY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6551 34.419 166.0 371600.0 25 0 42174.0 20069 LITVAFNQP 9 95 501.782418190652 1001.550283448104 2 501.7776672244072 MULTI CID FTMS 0 0 0 6539 208167.0625 0.02504822727174 13 -0.2341690063476562 12 Unmodified _LITVAFNQP_ ENSG00000091164|ENST00000217515|TXNL1;ENST00000587807.5_1_18:54270260-54293401:-|nuORF 21.74664581756881 0.2544899275067181 5 [AG]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}A]QG{I|L} 10 8 + 40.88 0.0 0.0 4.0817 4.0817 87.408 0.0 0.0 0.0 12.195703540308855 13.527348363583664 12.195703540308855 25.728050365394427 0 0.9303115997617928 1.0457574905606752 0.0 0.3494850021680094 [AG]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}A]QG{I|L};[AG]{I|L}[YG]{[NV]|[RG]}{I|L}VP;[AG]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[AG][W{M(Oxidation (M))|F}]{[NV]|[RG]}{I|L}VP 4.0817;1.5129;1.5062;0.5359 -;-;-;- 445 + 1 2.357 49904.8 1.0 2411 4138 6539 SUDHL4_400M_050219_1,6551 SUDHL4_400M_050219_1,6551,LITVAFNQP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6553 34.436 800.0 106720.0 25 0 6631.8 14680 IIRQKPVDL 9 140 541.3400184005703 1080.6654838679406 2 541.3401367068291 MULTI CID FTMS 0 0 0 6552 71696.8125 0.3383671569280636 3 -0.0918807983398437 1 Unmodified _IIRQKPVDL_ ENSG00000197943|ENST00000564138|PLCG2 10.823927491677226 0.5436922275383211 5 {I|L}{I|L}R[KP]VQ 7 3 26.594 0.0 0.0 2.4609 0.0 0.0 0.0 243.09819806155303 243.09819806155303 13.495042288514265 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {I|L}{I|L}R[KP]VQ 2.4609 - 153 1 2.34 73752.0 0.550000011920929 2412 4139 6552 SUDHL4_400M_050219_1,6553 SUDHL4_400M_050219_1,6553,IIRQKPVDL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6554 34.437 46.0 1490500.0 25 0 304570.0 20809 LLWAFCAP 8 81 460.7369345934219 919.4593162536438 2 460.7368652224541 MULTI CID FTMS 0 0 0 6552 1091215.625 0.1635201562829907 -11 0.5576629638671875 2 Unmodified _LLWAFCAP_ ENSG00000180398|ENST00000319466|MCFD2;ENST00000477791.5_1_2:47134810-47142912:-|nuORF;ENST00000487121.1_1_2:47136034-47168791:-|nuORF 11.114462752807354 0.7467182956244686 5 [DV][{I|L}T]S 5 8 19.365 0.0 0.0 2.1062 0.0 0.0 0.0 401.1804903619751 401.1804903619751 -0.0985204329099254 0.0 -0.0985204329099254 0.0 0 0.0 2.0 0.2887254899964357 0.0 [DV][{I|L}T]S 2.1062 - 30 + 1 2.34 61236.8 1.0 2413 4139 6552 SUDHL4_400M_050219_1,6554 SUDHL4_400M_050219_1,6554,LLWAFCAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6555 34.439 90.0 806440.0 25 0 104650.0 + 11646 GLATDVQTV 9 94 452.2428052144919 902.4710574957836 2 452.2425414919853 MULTI CID FTMS 0 0 0 6552 825826.0 0.0927801184914683 -10 0.4782180786132812 3 Unmodified _GLATDVQTV_ ENSG00000277791|ENST00000619426|PSMB3 70.71552829651908 0.0208223590022201 5 {[VA]|[{I|L}G]}ASE 5 6 35.813 0.0 0.0 3.9683 0.0 0.0 0.0 442.2278073339275 442.2278073339275 7.906818243744247 0.0 0.0 0.0 0 0.0 2.0 0.5891368308784531 0.0 {[VA]|[{I|L}G]}ASE 3.9683 - 646 1 2.34 60788.5 1.0 2414 4139 6552 SUDHL4_400M_050219_1,6555 SUDHL4_400M_050219_1,6555,GLATDVQTV True True GLATDVQTV 34.439104 452.242541491985 38761880.0 6552.0 ENSG00000277791|ENST00000619426|PSMB3 4.11216386159261 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6556 34.442 161.0 353140.0 25 0 22896.0 + -1 LIINMMGTV 9 94 512.2659535043399 1022.5173540754798 2 512.2655517458916 MULTI CID FTMS 0 0 0 6552 293453.5625 0.359781592726848 -7 0.282562255859375 4 2 Oxidation (M) _LIINM(Oxidation (M))M(Oxidation (M))GTV_ REV__ENST00000545220.1_1_12:7343495-7354840:+|nuORF 12.531546534597751 0.4974689918368763 5 QS{[SA]|[TG]}{I|L}P[HK]T 9 -1 28.927 0.0 0.0 2.829 0.0 0.0 0.0 70.03075586490468 70.03075586490468 15.827775341665356 0.0 0.0 0.0 0 0.0 0.0 0.9049471895720984 0.0 QS{[SA]|[TG]}{I|L}P[HK]T 2.829 - 297 + 1 2.34 51762.0 1.0 2415 4139 6552 SUDHL4_400M_050219_1,6556 SUDHL4_400M_050219_1,6556,LIINMMGTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6557 34.447 231.0 227040.0 25 0 16206.0 + 29200 QGIGKLASV 9 99 436.7636761122844 871.5127992913689 2 436.7635681033134 MULTI CID FTMS 0 0 0 6552 262675.0 0.9011073878241584 1 -0.0599403381347656 5 Unmodified _QGIGKLASV_ ENSG00000177600|ENST00000321153|RPLP2;ENST00000525722.1_1_11:811587-812833:+|nuORF;ENST00000526222.5_1_11:810419-812833:+|nuORF;ENST00000532004.5_1_11:810000-812833:+|nuORF 27.628801355627647 0.1796483985696185 5 SV 2 7 21.281 0.0 0.0 2.4419 0.0 0.0 667.400965650547 0.0 667.400965650547 0.0 11.677353201839438 0.0 0.0 0 0.5 0.0 0.2302046884880938 0.0 + SV 2.4419 + + 68 + 1 2.34 49671.2 1.0 2416 4139 6552 SUDHL4_400M_050219_1,6557 SUDHL4_400M_050219_1,6557,QGIGKLASV False True QGIGKLASV 34.44661 436.763568103313 2066256.375 6552.0 ENST00000525722.1_1_11:811587-812833:+|nuORF;;ENSG00000177600|ENST00000321153|RPLP2;;ENST00000526222.5_1_11:810419-812833:+|nuORF;;ENST00000532004.5_1_11:810000-812833:+|nuORF 3.8804381688435874 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6558 34.46 800.0 230650.0 25 0 23025.0 + -1 KIIIDKEYY 9 151 593.1576105830095 0 592.8322631716728 PEAK CID FTMS 0 0 0 6552 54152.1875 0.1842198395519369 -3 0.158660888671875 6 2 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))DC(Carbamidomethyl (C))DDNHM(Oxidation (M))C_ ENSG00000168090|ENST00000303904|COPS6;ENST00000496358.1_1_7:99686670-99688376:+|nuORF;ENST00000465027.1_1_7:99686972-99687407:+|nuORF 0.0 0.3444685223463735 5 YK{I|L}{I|L}{I|L}ED 7 -1 32.958 0.0 0.0 2.7829 0.0 0.0 181.72206630876616 125.07274805240468 306.79481436117084 0.0 0.0 0.0 0.0 0 0.0 0.0 1.8324385367314688 0.0 YK{I|L}{I|L}{I|L}ED 2.7829 - 621 + 1 2.34 136461.0 0.8500000238418579 2417 4139 6552 SUDHL4_400M_050219_1,6558 SUDHL4_400M_050219_1,6558,CDCDDNHMC False False KIIIDKEYY 34.460442 592.832263171673 1971720.125 6552.0 ENSG00000168090|ENST00000303904|COPS6;;ENST00000496358.1_1_7:99686670-99688376:+|nuORF;;ENST00000465027.1_1_7:99686972-99687407:+|nuORF 5.292726834615071 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6559 34.465 245.0 242730.0 25 0 26637.0 + 17344 KLWPEASKV 9 105 529.3054484770337 1056.5963440208673 2 529.3052856326103 MULTI CID FTMS 0 0 0 6552 207655.90625 1.0 0 0.0 7 Unmodified _KLWPEASKV_ ENSG00000151835|ENST00000382292|SACS 31.26834338654808 0.1333407332142048 5 [K{I|L}]W 3 6 20.744 0.0 0.0 1.9633 0.0 0.0 0.0 626.3142144644797 626.3142144644797 -2.9453125937239832 0.0 -2.9453125937239832 0.0 0 1.0 0.0 0.0 0.6307196863200843 + [K{I|L}]W 1.9633 + + 164 1 2.34 50026.7 1.0 2418 4139 6552 SUDHL4_400M_050219_1,6559 SUDHL4_400M_050219_1,6559,KLWPEASKV False True KLWPEASKV 34.465027 529.30528563261 976489.125 6552.0 ENSG00000151835|ENST00000382292|SACS 3.046477794647217 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6560 34.479 800.0 83942.0 25 0 16507.0 -1 SIQCWHVHCEE 11 97 714.2968017458916 0 714.2968017458916 PEAK CID FTMS 0 0 0 -1 0 8 Carbamidomethyl (C) _SIQC(Carbamidomethyl (C))WHVHCEE_ ENSG00000187147|ENST00000361799|RNF220;ENST00000474064.5_1_1:45098020-45115698:+|nuORF;ENST00000475378.5_1_1:45097966-45116444:+|nuORF;ENST00000480686.5_1_1:45110332-45115698:+|nuORF;nc|ENSG00000187147|Q5VTB9-3|RNF220 2.498486711656943 0.4761840153648598 5 {M(Oxidation (M))|F} 1 -1 11.99 0.0 0.0 0.84104 0.0 0.0 1097.4334181466074 178.05153833560783 1275.4849564822152 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.84104 - 24 + 1 2.34 51790.8 0.5899999737739563 2419 4139 6552 SUDHL4_400M_050219_1,6560 SUDHL4_400M_050219_1,6560,SIQCWHVHCEE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6562 34.483 5.0 8446200.0 25 0 1707600.0 + 42269 VSPVFSGQL 9 54 467.2572661654172 932.4999793976344 2 467.2574645876884 MULTI CID FTMS 0 0 0 6561 1022955.4375 0.3694919084338938 2 -0.0319404602050781 1 Unmodified _VSPVFSGQL_ ENST00000563939.2_1_16:67063920-67070621:+|nuORF 4.3292370932331545 0.7635526921153418 5 {I|L} 1 8 11.99 0.0 0.0 1.2858 0.0 0.0 801.404640507789 0.0 801.404640507789 0.0 1.2763625255165325 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2858 + + 19 + 1 2.298 38253.2 1.0 2420 4140 6561 SUDHL4_400M_050219_1,6562 SUDHL4_400M_050219_1,6562,VSPVFSGQL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6563 34.487 210.0 493110.0 25 0 57286.0 + 14946 ILMEHIHKL 9 137 378.5546115961645 1132.6420053886936 3 378.5549804568291 MULTI CID FTMS 0 0 0 6561 315547.375 0.0264453437118726 9 -0.1056861877441406 2 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 42.312485326615175 0.0627620958981271 5 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 67.935 0.0 0.0 5.9979 5.9979 92.494 0.0 0.0 0.0 47.50213428007541 5.590909179347818 5.590909179347818 17.193962872398032 0 0.3494850021680094 1.3979400086720375 0.8494850021680094 0.0 + + {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}ME[R{I|L}][{M(Oxidation (M))|F}V]{I|L};{I|L}{I|L}[YV]EQQK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQK{I|L};{I|L}[YV]{I|L}EQQK{I|L} 5.9979;4.4799;3.222;3.0665;1.347 +;-;-;-;- + 455 + 1 2.298 85580.0 1.0 2421 4140 6561 SUDHL4_400M_050219_1,6563 SUDHL4_400M_050219_1,6563,ILMEHIHKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6564 34.488 3.9 6302400.0 25 0 894450.0 -1 LHCLHSPA 8 47 467.7316873233548 933.4488217135096 2 467.7319518923759 MULTI CID FTMS 0 0 0 6561 14459968.0 1.0 0 0.0 3 Carbamidomethyl (C) _LHC(Carbamidomethyl (C))LHSPA_ ENST00000222005.6_1_19:10501827-10502160:-|nuORF 5.230669730166228 0.792582437072536 5 {I|L} 1 -1 5.4846 0.0 0.0 0.58756 0.0 0.0 735.2744117787425 82.06724725894765 817.3416590376902 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.58756 + + 5 + 1 2.298 27093.1 1.0 2422 4140 6561 SUDHL4_400M_050219_1,6564 SUDHL4_400M_050219_1,6564,LHCLHSPA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6565 34.489 8.9 4897300.0 25 0 803630.0 + 20760 LLSYPASAP 9 59 459.7492212910741 917.483889648948 2 459.7493774294853 MULTI CID FTMS 0 0 0 6561 6894200.0 0.713297564646795 -14 0.6812095642089844 4 Unmodified _LLSYPASAP_ REV__ENSG00000168875|ENST00000306087|SOX14 16.942295170755138 0.3780752226737986 5 {I|L}{I|L}ATD 5 -1 35.234 0.0 0.0 3.8403 0.0 0.0 0.0 401.1831453912719 401.1831453912719 29.74932183384788 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}{I|L}ATD 3.8403 - 28 + 1 2.298 39949.3 1.0 2423 4140 6561 SUDHL4_400M_050219_1,6565 SUDHL4_400M_050219_1,6565,LLSYPASAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6566 34.49 45.0 689700.0 25 0 102650.0 + 42257 VSPFETDF 8 55 471.2164467857843 940.4183406383686 2 471.2161743044853 MULTI CID FTMS 0 0 0 6561 990899.3125 0.7612647517235352 -12 0.6176033020019531 5 Unmodified _VSPFETDF_ REV__ENSG00000204116|ENST00000373502|CHIC1;REV__nc|ENSG00000204116|Q5VXU3-2|CHIC1 9.347437153973935 0.7675937258251505 5 D 1 -1 7.6587 0.0 0.0 0.81439 0.0 0.0 754.3170965971561 68.05157648258046 822.3686730797366 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 D 0.81439 + + 5 + 1 2.298 34460.7 1.0 2424 4140 6561 SUDHL4_400M_050219_1,6566 SUDHL4_400M_050219_1,6566,VSPFETDF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6567 34.495 268.0 360700.0 25 0 26613.0 -1 WRRECPRWWRC 11 83 874.41264463118 0 874.4130126833916 PEAK CID FTMS 0 0 0 6561 453742.34375 0.4773975724910197 -14 0.6812095642089844 6 2 Carbamidomethyl (C) _WRREC(Carbamidomethyl (C))PRWWRC(Carbamidomethyl (C))_ ENST00000599470.5_2_19:39616427-39616532:+|nuORF 1.1933415558491238 0.4761840153648598 5 PN{I|L}NADQ 7 -1 56.635 0.0 0.0 3.2422 0.0 0.0 261.07671693165804 730.3635347955686 991.4402517272268 0.0 0.0 0.0 0.0 0 1.2134679910804405 0.0 0.3494850021680094 0.805462187404089 PN{I|L}NADQ 3.2422 - 383 + 1 2.298 71944.8 1.0 2425 4140 6561 SUDHL4_400M_050219_1,6567 SUDHL4_400M_050219_1,6567,WRRECPRWWRC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6569 34.501 217.0 656540.0 25 0 64268.0 + 38650 TTIKAFFPKK 10 145 394.2411026759341 1179.7014786280024 3 394.2423889040947 MULTI CID FTMS 0 0 0 6568 303984.875 0.0237121219980734 9 -0.0931015014648437 1 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 26.268140514670165 0.3785003716575977 5 TT{I|L}KY{I|L}WKK 9 4 + 76.034 0.0 0.0 6.4452 6.4452 92.652 0.0 0.0 0.0 59.77499079232478 14.43697499232713 14.43697499232713 11.395289293545588 0 0.2396518287104437 1.5228787452803376 0.0 0.3494850021680094 TT{I|L}KY{I|L}WKK;TT{I|L}KY{I|L}{[NV]|[RG]}TK;[W{I|L}][VP][Q{I|L}]K{I|L}[PS] 6.4452;5.4792;0.20601 -;-;- 255 + 1 2.298 119957.5 1.0 2426 4141 6568 SUDHL4_400M_050219_1,6569 SUDHL4_400M_050219_1,6569,TTIKAFFPKK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6570 34.511 540.0 221580.0 25 0 36423.0 -1 0 98 915.4805786013604 0 915.4805786013604 PEAK CID FTMS 0 0 0 -1 0 2 5 WVP{I|L}DV 6 -1 17.176 0.0 0.0 0.93911 0.0 0.0 933.4422888051251 183.07854639224848 1116.5208351973738 0.0 0.0 0.0 0.0 0 0.5 0.0 0.9258337024346172 0.0 WVP{I|L}DV 0.93911 - 870 + 1 2.298 84977.4 1.0 2427 4141 6568 SUDHL4_400M_050219_1,6570 SUDHL4_400M_050219_1,6570, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6572 34.52 420.0 528830.0 25 0 43323.0 -1 SQRAFCTMHFY 11 131 732.31307621608 1462.61159949896 2 732.3132202029228 MULTI CID FTMS 0 0 0 6571 486333.25 0.1169806221846772 -17 0.7239112854003906 1 Carbamidomethyl (C),Oxidation (M) _SQRAFC(Carbamidomethyl (C))TM(Oxidation (M))HFY_ ENST00000277415.15_1_9:137989658-137989826:+|nuORF 5.731851221503515 0.8481046878870278 5 [AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 93.747 0.0 0.0 6.4096 6.4096 84.812 0.0 0.0 0.0 3.2123338175226763 11.448658907276354 3.2123338175226763 2.8475967253135366 0 0.8935078169319297 1.5228787452803376 1.0044321917401078 1.548455006504028 [AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]N[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQQGGA{M(Oxidation (M))|F}Y;[AG]NAQ[HD]QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQQGGA{M(Oxidation (M))|F}Y 6.4096;6.2149;6.19;5.7893;5.7893;5.7893;5.6913;5.6435;5.5961;5.5961 -;-;-;-;-;-;-;-;-;- 10250 1 2.298 157073.1 1.0 2428 4142 6571 SUDHL4_400M_050219_1,6572 SUDHL4_400M_050219_1,6572,SQRAFCTMHFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6573 34.526 347.0 198640.0 25 0 35971.0 + -1 KEILGMMEQHK 11 90 688.3413910519737 0 688.3406249880791 PEAK CID FTMS 0 0 0 6571 483019.15625 0.7596630308546803 -1 0.0153617858886718 2 2 Oxidation (M) _KEILGM(Oxidation (M))M(Oxidation (M))EQHK_ REV__ENSG00000162592|ENST00000294600|CCDC27 4.897010918128616 0.4761840153648597 5 ANQQAE 6 -1 18.849 0.0 0.0 1.3712 0.0 0.0 327.2660636945855 403.1022127740844 730.3682764686699 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ANQQAE 1.3712 - 94 + 1 2.298 60819.7 1.0 2429 4142 6571 SUDHL4_400M_050219_1,6573 SUDHL4_400M_050219_1,6573,KEILGMMEQHK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6575 34.53 70.0 961380.0 25 0 101050.0 + 34478 SMLEDVQRA 9 66 524.7581010568491 1047.501649180498 2 524.7582885622978 MULTI CID FTMS 0 0 0 6574 1512545.375 0.4848645845897026 4 -0.0513114929199218 1 Unmodified _SMLEDVQRA_ ENSG00000106344|ENST00000223073|RBM28 45.69961567697781 0.0497987121815769 5 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}EDVQ{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 75.596 0.0 0.0 7.2168 7.2168 92.855 0.0 0.0 0.0 51.15865011156764 4.137342758552691 4.137342758552691 9.208187539523747 0 0.8494850021680094 2.0 0.4247425010840047 0.6989700043360187 + + {[MS]|[{M(Oxidation (M))|F}A]}{I|L}EDVQ{[QV]|[N{I|L}]|[RA]|[KV]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EDV[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EA[RD]{[QV]|[N{I|L}]|[RA]|[KV]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[KG]AE{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[KQ]E{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[KG]{[QN]|[E{I|L}]|[KN]}A{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}A{[QN]|[E{I|L}]|[KN]}[RD]{[QV]|[N{I|L}]|[RA]|[KV]};[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][HM]VQ{[QV]|[N{I|L}]|[RA]|[KV]};[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][HM]V[AG]{[QV]|[N{I|L}]|[RA]|[KV]} 7.2168;6.3377;4.8057;4.6183;4.5695;2.9001;2.2047;1.0615;0.17731 +;-;-;-;-;-;-;-;- + 120 + 1 2.298 58045.1 1.0 2430 4143 6574 SUDHL4_400M_050219_1,6575 SUDHL4_400M_050219_1,6575,SMLEDVQRA True True SMLEDVQRA 34.530368 524.758288562298 28947628.0 6574.0 ENSG00000106344|ENST00000223073|RBM28 8.160407702128092 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6576 34.537 358.0 34977.0 25 0 2479.0 -1 0 22 1159.460253894329 0 1159.460253894329 PEAK CID FTMS 0 0 0 -1 0 2 5 W 1 -1 5.4846 0.0 0.0 0.23672 0.0 0.0 1421.4042787462406 706.3825535226653 2127.786832268906 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.23672 - 2 + 1 2.298 19637.9 1.0 2431 4143 6574 SUDHL4_400M_050219_1,6576 SUDHL4_400M_050219_1,6576, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6577 34.543 295.0 417650.0 25 0 44347.0 + 38354 TQMPDPKTF 9 130 532.7570767718705 0 532.7576171755791 PEAK CID FTMS 0 0 0 6574 468229.53125 0.8809097731170142 -3 0.0474662780761718 3 Unmodified _TQMPDPKTF_ ENSG00000120963|ENST00000311212|ZNF706 34.93206674587334 0.0866320009191956 5 S{I|L}EN{M(Oxidation (M))|F}TP 7 8 39.06 0.0 0.0 3.6728 0.0 0.0 147.03693841442208 125.07280908756094 272.109747501983 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.3494850021680094 0.3252574989159953 S{I|L}EN{M(Oxidation (M))|F}TP 3.6728 - 448 + 1 2.298 102296.5 1.0 2432 4143 6574 SUDHL4_400M_050219_1,6577 SUDHL4_400M_050219_1,6577,TQMPDPKTF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6579 34.55 287.0 571490.0 25 0 42604.0 -1 0 124 910.9156306721646 1819.8167084111287 2 910.9172851443292 MULTI CID FTMS 0 0 0 6578 916801.4375 1.0 0 0.0 1 5 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEEQR[DG]{M(Oxidation (M))|F}{I|L}Q 16 -1 + 75.189 0.0 0.0 4.1317 4.1317 77.2 0.0 0.0 0.0 40.869959741933215 6.77198607445348 6.77198607445348 1.9382002601611248 0 0.8494850021680094 0.0 0.4247425010840047 1.4802046884880935 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEEQR[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQR[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEE{[NV]|[RG]}A[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEE[AG]R[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEEQ[VG][DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}GGEEQR[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEE[AG]R[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEEQR[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEE{[NV]|[RG]}A[DG]{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQ[VG][DG]{M(Oxidation (M))|F}{I|L}Q 4.1317;4.0252;3.6364;3.6364;3.6364;3.6364;3.5289;3.5289;3.5289;3.5289 -;-;-;-;-;-;-;-;-;- 4592 + 1 2.298 109700.0 1.0 2433 4144 6578 SUDHL4_400M_050219_1,6579 SUDHL4_400M_050219_1,6579, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6580 34.554 251.0 262050.0 25 0 95164.0 -1 0 60 564.3591351716472 563.3518587050471 1 564.3593627810478 MULTI CID FTMS 0 0 0 6578 601491.25 0.0151109045993891 19 -0.2308731079101562 2 5 C(Carbamidomethyl (C)) 1 -1 2.4743 0.0 0.0 0.4392 0.0 0.0 77.13763858961586 323.1717318170532 400.309370406669 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.4392 - 9 + 1 2.298 55877.8 1.0 2434 4144 6578 SUDHL4_400M_050219_1,6580 SUDHL4_400M_050219_1,6580, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6582 34.564 297.0 400210.0 25 0 96021.0 -1 0 62 955.5598675507804 0 955.559619128704 PEAK CID FTMS 0 0 0 6581 455500.8125 0.8802820376101279 -1 0.0117111206054687 1 5 WVVE 4 -1 22.562 0.0 0.0 1.1818 0.0 0.0 1013.599974107082 379.2005817817927 1392.800555888875 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6643943297944485 0.0 WVVE 1.1818 - 198 + 1 2.289 89636.1 1.0 2435 4145 6581 SUDHL4_400M_050219_1,6582 SUDHL4_400M_050219_1,6582, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6583 34.569 263.0 449760.0 25 0 87805.0 + 11811 GLNCRYTV 8 129 463.2337603826013 0 463.2341186404228 PEAK CID FTMS 0 0 0 6581 436167.40625 0.5150853749609 -6 0.1354637145996093 2 Unmodified _GLNCRYTV_ REV__ENSG00000203710|ENST00000367049|CR1;REV__nc|ENSG00000203710|P17927|CR1 38.15118350030904 0.1572189310998713 5 ATDV 4 -1 26.983 0.0 0.0 2.9188 0.0 0.0 170.1036896044788 365.1455782526001 535.2492678570788 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3494850021680094 0.0 ATDV 2.9188 - 431 + 1 2.289 93742.1 1.0 2436 4145 6581 SUDHL4_400M_050219_1,6583 SUDHL4_400M_050219_1,6583,GLNCRYTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6584 34.574 273.0 197130.0 25 0 12383.0 + 36700 TDEALLFQY 9 93 550.268625720318 1098.522698507436 2 550.7712890505791 MULTI CID FTMS 0 0 0 6581 380706.40625 0.9431250012096204 -1 0.0117111206054687 3 Unmodified _TDEALLFQY_ REV__ENSG00000136824|ENST00000374793|SMC2;REV__nc|ENSG00000136824|O95347-2|SMC2 8.593279151180031 0.6146971463335029 5 [VS][YR]P[PA]{M(Oxidation (M))|F}Y 9 -1 [VS][YR]P[PA]{M(Oxidation (M))|F} + + 15.485 -0.50136 -0.054647 1.4096 1.4096 52.631 0.0 0.0 0.0 0.0 -2.8778746951401537 -2.8778746951401537 0.0 0 0.0 0.0 0.0 0.0 [VS][YR]P[PA]{M(Oxidation (M))|F}Y 1.4096 - 135 + 1 2.289 45971.1 1.0 2437 4145 6581 SUDHL4_400M_050219_1,6584 SUDHL4_400M_050219_1,6584,TDEALLFQY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6589 34.589 100.0 973180.0 25 0 95504.0 + 30964 RLAPEIVSA 9 108 478.28192953111886 954.5493061290376 2 478.2814514040947 MULTI CID FTMS 0 0 0 6588 1021008.75 0.7777059660619186 3 -0.0283966064453125 1 Unmodified _RLAPEIVSA_ ENSG00000275342|ENST00000615670|PRAG1 26.268140514670165 0.1969607489560049 5 [R{I|L}]EPA{I|L}VSA 9 2 + 38.104 0.0 0.0 3.9919 3.9919 80.297 0.0 0.0 0.0 8.55172654502573 9.999999999999991 8.55172654502573 5.1059905927697 0 1.3182503180159344 0.0 0.6382104921644451 0.0 [R{I|L}]EPA{I|L}VSA;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[YK]VSA;[R{I|L}]EPA{I|L}{[SA]|[TG]}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[YK]{[SA]|[TG]}V;VVA{I|L}{I|L}[WP]SA 3.9919;3.457;1.2555;0.72057;0.67176 -;-;-;-;- 150 + 1 2.289 77984.2 1.0 2438 4149 6588 SUDHL4_400M_050219_1,6589 SUDHL4_400M_050219_1,6589,RLAPEIVSA False True RLAPEIVSA 34.588587 478.281451404095 7638824.0 6588.0 ENSG00000275342|ENST00000615670|PRAG1 3.211066166559855 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6591 34.597 241.0 307280.0 25 0 60052.0 + 17269 KLPEKWESV 9 84 558.3085001953657 1114.6024474575313 2 558.3088867068291 MULTI CID FTMS 0 0 0 6590 358113.9375 0.2517541611898559 -13 0.2846603393554687 1 Unmodified _KLPEKWESV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 32.78568957990786 0.1150597335874693 5 K{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WK 7 6 42.056 0.0 0.0 3.7732 0.0 0.0 0.0 223.0733126276 223.0733126276 30.263702536251493 0.0 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.0 K{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}WK 3.7732 - 166 + 1 2.289 65647.4 1.0 2439 4150 6590 SUDHL4_400M_050219_1,6591 SUDHL4_400M_050219_1,6591,KLPEKWESV True True KLPEKWESV 34.597378 558.308886706829 23611096.0 6590.0 ENSG00000171490|ENST00000571133|RSL1D1;;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;;nc|ENSG00000171490|O76021-2|RSL1D1;;ENST00000574823.5_1_16:11935494-11935832:-|nuORF 4.620184580485026 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6593 34.604 281.0 343710.0 25 0 26904.0 + -1 LCEKYMRCFY 10 102 743.3223234360755 0 743.3235961794853 PEAK CID FTMS 0 0 0 6592 281179.84375 0.5152386052607076 2 -0.0253067016601562 1 2 Carbamidomethyl (C),Oxidation (M) _LC(Carbamidomethyl (C))EKYM(Oxidation (M))RC(Carbamidomethyl (C))FY_ REV__ENSG00000169519|ENST00000407364|METTL15;REV__nc|ENSG00000169519|A6NJ78-2|METTL15;REV__nc|ENSG00000169519|A6NJ78-3|METTL15;REV__nc|ENSG00000169519|A6NJ78-4|METTL15;REV__nc|ENSG00000174912|P0C7V9|METTL15P1 6.723162845929126 0.3961065659209837 5 {I|L}AANQQAEDHQ 11 -1 67.314 0.0 0.0 4.5341 0.0 0.0 143.98343974148844 132.04621301822502 276.0296527597135 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.1861818737241734 {I|L}AANQQAEDHQ 4.5341 - 970 + 1 2.289 75005.2 1.0 2440 4151 6592 SUDHL4_400M_050219_1,6593 SUDHL4_400M_050219_1,6593,LCEKYMRCFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6594 34.608 205.0 313550.0 25 0 23692.0 + 62 AAEEGLREL 9 100 494.25861327937264 986.5026736255452 2 494.2588683962822 MULTI CID FTMS 0 0 0 6592 753028.125 0.6868974193963282 -8 0.0710220336914062 2 Unmodified _AAEEGLREL_ ENSG00000167657|ENST00000545797|DAPK3;ENST00000595279.1_1_19:3959101-3961233:-|nuORF 45.69961567697781 0.0497987121815769 5 AAEEG{I|L}{[RE]|[WV]}{I|L} 9 0 + 65.881 0.0 0.0 6.6782 6.6782 93.321 0.0 0.0 0.0 40.24613421077092 9.493559221610964 9.493559221610964 11.707701600034357 0 0.4247425010840047 2.0 1.2302046884880935 0.0 + + AAEEG{I|L}{[RE]|[WV]}{I|L};AAEEG{I|L}[W{I|L}]V;AA[KQ]{[DA]|[EG]}{I|L}EAA;{[QN]|[E{I|L}]|[KN]}R{[DA]|[EG]}{I|L}EAA 6.6782;5.4914;2.7541;0.6697 +;-;-;- + 133 + 1 2.289 55334.5 1.0 2441 4151 6592 SUDHL4_400M_050219_1,6594 SUDHL4_400M_050219_1,6594,AAEEGLREL True True AAEEGLREL 34.608237 494.258868396282 6440897.0 6592.0 ENST00000595279.1_1_19:3959101-3961233:-|nuORF;;ENSG00000167657|ENST00000545797|DAPK3 4.322804768880208 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6595 34.613 254.0 230160.0 25 0 16910.0 -1 LKCCFMLFQLQ 11 89 744.3648111334495 1486.715069333699 2 744.8658935427666 MULTI CID FTMS 0 0 0 6592 549639.5625 1.0 0 0.0 3 2 Carbamidomethyl (C) _LKC(Carbamidomethyl (C))C(Carbamidomethyl (C))FMLFQLQ_ ENST00000372577.2_1_9:131744947-131745186:+|nuORF 5.296884461304476 0.8501568894076437 5 PN{I|L}NADQ[KA]N{M(Oxidation (M))|F}KQ 13 -1 + 97.415 0.0 0.0 6.5524 6.5524 87.452 0.0 0.0 0.0 30.05336961373078 12.5673094893111 12.5673094893111 4.824582160927406 0 2.1237125054200234 1.5228787452803376 0.0 0.3494850021680094 PN{I|L}NADQ[KA]N{M(Oxidation (M))|F}KQ;PN{I|L}NWQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 6.5524;6.2279 -;- 373 + 1 2.289 45993.4 1.0 2442 4151 6592 SUDHL4_400M_050219_1,6595 SUDHL4_400M_050219_1,6595,LKCCFMLFQLQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6597 34.623 295.0 356860.0 25 0 42822.0 + 20009 LILYFQLYF 9 94 407.2310889688428 1218.6714375067284 3 407.5658141970634 MULTI CID FTMS 0 0 0 6596 372260.125 0.6903974882084453 -5 0.0353050231933593 1 Unmodified _LILYFQLYF_ REV__ENST00000264414.8_1_2:225337627-225337783:-|nuORF 23.1484247019978 0.2366544122328345 5 {I|L}{I|L}QE{[RE]|[WV]}{I|L}RY 9 -1 + 64.663 0.0 0.0 5.306 5.306 88.024 0.0 0.0 0.0 53.24323344772773 9.921525057367404 9.921525057367404 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.805462187404089 {I|L}{I|L}QE{[RE]|[WV]}{I|L}RY;{I|L}{I|L}QE{[TV]|[{I|L}S]}[TP]RY;{I|L}{I|L}[AG]E{[RE]|[WV]}{I|L}RY;{I|L}{I|L}QE{[RE]|[WV]}[YR]{I|L};{I|L}{I|L}QE{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 5.306;4.5504;4.5504;4.1344;4.0318 -;-;-;-;- 161 + 1 2.289 87589.5 1.0 2443 4152 6596 SUDHL4_400M_050219_1,6597 SUDHL4_400M_050219_1,6597,LILYFQLYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6599 34.627 2.5 13208000.0 25 0 4049100.0 28714 PVSVLEVGP 9 50 448.7581444757428 895.5017360182856 2 448.7581970095634 MULTI CID FTMS 0 0 0 6598 24469694.0 0.7596631163950079 8 -0.1282577514648437 1 Unmodified _PVSVLEVGP_ ENST00000377080.7_1_X:47092827-47092914:+|nuORF 18.13498045792455 0.3457906370836843 5 {[SA]|[TG]}E{I|L}{I|L} 5 7 18.015 0.0 0.0 2.0118 0.0 0.0 0.0 379.1970844892418 379.1970844892418 -4.2469727149764935 0.0 -4.2469727149764935 0.0 0 0.0 0.0 0.7302046884880937 0.0 {[SA]|[TG]}E{I|L}{I|L} 2.0118 - 51 1 2.289 31431.3 1.0 2444 4153 6598 SUDHL4_400M_050219_1,6599 SUDHL4_400M_050219_1,6599,PVSVLEVGP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6600 34.631 213.0 586090.0 25 0 62437.0 + 12075 GQFPGHNEF 9 126 516.7305607301898 1031.4465685271796 2 516.7308837771416 MULTI CID FTMS 0 0 0 6598 432683.25 0.506136832289259 13 -0.2587661743164062 2 Unmodified _GQFPGHNEF_ ENSG00000163171|ENST00000295324|CDC42EP3 60.07390631473393 0.0260411565414776 5 [WE]{[WT]|[RM]}P{M(Oxidation (M))|F} 6 8 42.981 0.0 0.0 4.1671 0.0 0.0 0.0 182.05513508268737 182.05513508268737 14.048055046372006 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.7302046884880937 0.6549471895720984 [WE]{[WT]|[RM]}P{M(Oxidation (M))|F} 4.1671 - 765 1 2.289 97776.0 1.0 2445 4153 6598 SUDHL4_400M_050219_1,6600 SUDHL4_400M_050219_1,6600,GQFPGHNEF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6601 34.635 245.0 398970.0 25 0 36211.0 + 10098 FPTSQRLPA 9 98 508.7800175004863 1015.5454820677726 2 508.7794982790947 MULTI CID FTMS 0 0 0 6598 561164.25 0.5065970367331076 4 -0.0423164367675781 3 Unmodified _FPTSQRLPA_ ENST00000399831.7_1_8:38965091-38975631:+|nuORF 24.020572477871973 0.2255576514309169 5 {M(Oxidation (M))|F}PTGAR[PS]A{I|L} 10 4 + 55.499 0.0 0.0 5.465 5.465 85.34 0.0 0.0 0.0 38.431087926598266 4.436974992327123 4.436974992327123 6.020599913279625 0 1.1549471895720984 0.0 0.3807196863200844 0.0 {M(Oxidation (M))|F}PTGAR[PS]A{I|L};{M(Oxidation (M))|F}PTGAR{[TV]|[{I|L}S]}AP;{M(Oxidation (M))|F}PTQR[PS]A{I|L};{M(Oxidation (M))|F}PTQR{[TV]|[{I|L}S]}AP;{M(Oxidation (M))|F}PTG{I|L}[WK]AP;[YV][NP]R[PS]A{I|L} 5.465;4.8721;4.8218;4.2289;3.6543;0.08405 -;-;-;-;-;- 319 + 1 2.289 86485.6 1.0 2446 4153 6598 SUDHL4_400M_050219_1,6601 SUDHL4_400M_050219_1,6601,FPTSQRLPA False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6603 34.643 252.0 497230.0 25 0 24595.0 + 24095 LYIMKLNV 8 129 497.2957418003654 992.5769306675307 2 497.2957031130791 MULTI CID FTMS 0 0 0 6602 354515.21875 0.19719935741913 12 -0.24615478515625 1 Unmodified _LYIMKLNV_ REV__ENST00000287912.7_1_7:155437535-155471332:+|nuORF 34.18733598223924 0.3315367612694167 5 D{I|L}K{I|L}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 7 -1 32.835 0.0 0.0 3.3081 0.0 0.0 116.09161526331964 0.0 116.09161526331964 0.0 20.616611225516408 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.805462187404089 D{I|L}K{I|L}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 3.3081 - 359 + 1 2.2 99554.6 1.0 2447 4154 6602 SUDHL4_400M_050219_1,6603 SUDHL4_400M_050219_1,6603,LYIMKLNV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6605 34.654 347.0 44718.0 25 0 3886.8 + -1 QTIWKKRRKKK 11 43 771.4919921755791 0 771.4919921755791 PEAK CID FTMS 0 0 0 -1 0 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))QTIWKKRRKKK_ REV__ENST00000439685.6_1_3:112358751-112359896:-|nuORF 0.0 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.2 18458.3 1.0 2448 4155 6604 SUDHL4_400M_050219_1,6605 SUDHL4_400M_050219_1,6605,QTIWKKRRKKK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6607 34.658 29.0 1426700.0 25 0 241880.0 26774 PAGDEALGGY 10 77 475.2158537108714 948.4171544885428 2 475.2143127322197 MULTI CID FTMS 0 0 0 6606 1810793.125 0.6304826441653933 9 -0.1697463989257812 1 Unmodified _PAGDEALGGY_ ENSG00000171450|ENST00000302625|CDK5R2 7.910154910731844 0.6900473968920092 5 Y 1 9 13.495 0.0 0.0 1.4229 0.0 0.0 767.3423844463538 0.0 767.3423844463538 0.0 3.7409401350310034 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.4229 + + 62 + 1 2.2 39473.7 1.0 2449 4156 6606 SUDHL4_400M_050219_1,6607 SUDHL4_400M_050219_1,6607,PAGDEALGGY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6608 34.665 388.0 259190.0 25 0 21349.0 -1 0 57 1046.1081607927554 6270.605305956933 6 1046.776171863079 MULTI CID FTMS 0 0 0 6606 298198.5 0.7693384078878223 -1 0.0105972290039062 2 5 {I|L} 1 -1 3.9794 0.0 0.0 0.063461 0.0 0.0 5330.151125837203 824.3478487604124 6154.498974597615 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.063461 - 2 + 1 2.2 70624.7 1.0 2450 4156 6606 SUDHL4_400M_050219_1,6608 SUDHL4_400M_050219_1,6608, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6610 34.675 302.0 289520.0 25 0 27082.0 + 38874 TVKGVSLSSY 10 107 520.784662055941 1039.554771178682 2 520.7847778201103 MULTI CID FTMS 0 0 0 6609 455014.40625 0.3657682366871611 -6 0.0676231384277343 1 Unmodified _TVKGVSLSSY_ ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 83.42873516780209 0.014257832770272 5 {[TV]|[{I|L}S]}[KG]VSS{I|L}SY 10 2 + 66.793 0.0 0.0 6.4252 6.4252 81.758 0.0 0.0 0.0 17.258425459985197 39.83816976787181 17.258425459985197 0.435391898196201 0 1.3935078169319297 1.3979400086720375 1.8243923658886183 0.0 {[TV]|[{I|L}S]}[KG]VSS{I|L}SY;{[TV]|[{I|L}S]}[KG]VS{I|L}SSY;{[TV]|[{I|L}S]}KKDS{I|L}SY;{[TV]|[{I|L}S]}KKD{I|L}SSY;{[TV]|[{I|L}S]}[KS][VG]S{I|L}SY;{[TV]|[{I|L}S]}[KS][VG]{I|L}SSY;[VS][KA]VSS{I|L}SY;[VS][KA]VS{I|L}SSY;[VS][KG]{I|L}SS{I|L}SY;[VS][KG]{I|L}S{I|L}SSY 6.4252;6.3833;5.295;5.2531;4.4092;4.3674;4.0113;3.9694;3.9224;3.8805 -;+;-;-;-;-;-;-;-;- + 524 1 2.2 68949.3 1.0 2451 4157 6609 SUDHL4_400M_050219_1,6610 SUDHL4_400M_050219_1,6610,TVKGVSLSSY True True TVKGVSLSSY 34.674914 520.78477782011 4990650.0 6609.0 ENSG00000101166|ENST00000355937|PRELID3B;;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 5.60741647084554 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6611 34.682 404.0 197850.0 25 0 16513.0 5986 DRFEEVYFRIQ 11 92 751.3733631835893 1500.7321734339785 2 751.3714477419853 MULTI CID FTMS 0 0 0 6609 182443.296875 0.4017287065950844 1 -0.0171699523925781 2 Unmodified _DRFEEVYFRIQ_ ENSG00000177663|ENST00000319363|IL17RA;nc|ENSG00000177663|Q96F46-2|IL17RA 23.78978130925829 0.5336113198261219 5 PN{I|L}NEAQ 7 9 87.414 0.0 0.0 5.8247 0.0 0.0 0.0 731.3516590778713 731.3516590778713 11.676256343278157 0.0 0.0 0.0 0 1.5 1.5228787452803376 0.0 1.5114393726401687 PN{I|L}NEAQ 5.8247 - 351 + 1 2.2 57319.8 1.0 2452 4157 6609 SUDHL4_400M_050219_1,6611 SUDHL4_400M_050219_1,6611,DRFEEVYFRIQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6613 34.694 413.0 240030.0 25 0 20017.0 + 40769 VLLAAGPSAA 10 141 435.2582346652212 868.5019163972423 2 435.2575256228447 MULTI CID FTMS 0 0 0 6612 202314.109375 0.3078788637087133 -8 0.0936012268066406 1 Unmodified _VLLAAGPSAA_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 36.04419817259434 0.1993394420055842 5 [{I|L}V]{I|L} 3 7 27.447 0.0 0.0 3.1603 0.0 0.0 0.0 540.2423911791459 540.2423911791459 12.121507214065922 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [{I|L}V]{I|L} 3.1603 + + 226 1 2.2 80573.0 1.0 2453 4158 6612 SUDHL4_400M_050219_1,6613 SUDHL4_400M_050219_1,6613,VLLAAGPSAA False True VLLAAGPSAA 34.69389 435.257525622845 7961111.0 6612.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENSG00000132182|ENST00000254508|NUP210 4.397591590881348 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6615 34.698 11.0 3088700.0 25 0 441450.0 + 11647 GLATDVQTV 9 72 452.2428052144919 902.4710574957836 2 452.2426330447197 MULTI CID FTMS 0 0 0 6614 4747693.5 0.5333951286241584 10 -0.3965110778808594 1 Unmodified _GLATDVQTV_ ENSG00000277791|ENST00000619426|PSMB3 36.04419817259434 0.0971720506436186 5 {[VA]|[{I|L}G]}ASE 5 6 33.543 0.0 0.0 3.7168 0.0 0.0 0.0 442.2271359472088 442.2271359472088 9.998774732165998 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.0 {[VA]|[{I|L}G]}ASE 3.7168 - 109 1 2.2 32252.1 1.0 2454 4159 6614 SUDHL4_400M_050219_1,6615 SUDHL4_400M_050219_1,6615,GLATDVQTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6616 34.707 469.0 309450.0 25 0 22064.0 -1 0 63 1046.1081607927554 6270.605305956933 6 1046.607592761517 MULTI CID FTMS 0 0 0 6614 277089.1875 1.0 0 0.0 2 5 T 1 -1 3.9794 0.0 0.0 0.063461 0.0 0.0 5960.203677394236 206.33246790103752 6166.536145295273 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.063461 - 7 + 1 2.2 99036.0 1.0 2455 4159 6614 SUDHL4_400M_050219_1,6616 SUDHL4_400M_050219_1,6616, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6617 34.715 459.0 203950.0 25 0 27450.0 + 31712 RRQTALTKD 9 141 363.54388157913286 0 363.5438110232353 PEAK CID FTMS 0 0 0 6614 224013.875 1.0 0 0.0 3 Unmodified _RRQTALTKD_ REV__ENSG00000076108|ENST00000549884|BAZ2A;REV__ENST00000548578.1_1_12:56999598-57000129:-|nuORF;REV__nc|ENSG00000076108|Q9UIF9-2|BAZ2A;REV__nc|ENSG00000076108|Q9UIF9-3|BAZ2A;REV__nc|ENSG00000076108|Q9UIF9|BAZ2A 3.5964929083625545 0.3444685223463734 5 S 1 -1 4.6041 0.0 0.0 0.63498 0.0 0.0 362.8900875217439 272.13007532291255 635.0201628446564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.63498 - 8 + 1 2.2 79860.6 1.0 2456 4159 6614 SUDHL4_400M_050219_1,6617 SUDHL4_400M_050219_1,6617,RRQTALTKD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6618 34.722 415.0 145120.0 25 0 21892.0 + + 27062 KLPEFTKSEY 10 88 621.8263405507082 0 621.8252441287041 PEAK CID FTMS 0 0 0 6614 213743.390625 1.0 0 0.0 4 Unmodified _PERQKDPPLY_ nc|ENSG00000114796|Q6TFL4-2|KLHL24;ENSG00000114796|ENST00000242810|KLHL24 6.723162845929126 0.3961065659209837 5 PQ 2 -1 9.6927 0.0 0.0 0.78064 0.0 0.0 242.180464515802 771.3405855768186 1013.5210500926204 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 PQ 0.78064 - 136 + 1 2.2 51060.8 1.0 2457 4159 6614 SUDHL4_400M_050219_1,6618 SUDHL4_400M_050219_1,6618,PERQKDPPLY False False KLPEFTKSEY 34.722174 621.825244128704 2087188.375 6614.0 nc|ENSG00000114796|Q6TFL4-2|KLHL24;;ENSG00000114796|ENST00000242810|KLHL24 6.144673983256022 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6620 34.734 411.0 217160.0 25 0 19190.0 + 43674 YASYDDDF 8 139 498.18371096629 994.35286899938 2 498.1841003298759 MULTI CID FTMS 0 0 0 6619 273583.9375 0.5060658400531808 13 -0.6092109680175781 1 Unmodified _YASYDDDF_ REV__ENSG00000122012|ENST00000502798|SV2C 6.354104778181461 0.7857632046190106 5 S{M(Oxidation (M))|F} 2 -1 21.454 0.0 0.0 2.1575 0.0 0.0 742.2404515365754 0.0 742.2404515365754 0.0 11.27258933184862 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 S{M(Oxidation (M))|F} 2.1575 - 98 + 1 2.121 73700.6 1.0 2458 4160 6619 SUDHL4_400M_050219_1,6620 SUDHL4_400M_050219_1,6620,YASYDDDF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6621 34.742 443.0 211910.0 25 0 19951.0 20553 LLMEIVTY 8 118 491.26828635949744 0 491.2670776247978 PEAK CID FTMS 0 0 0 6619 215668.1875 0.7487932737543443 1 -0.0287399291992187 2 Unmodified _LLMEIVTY_ ENSG00000101336|ENST00000375852|HCK;nc|ENSG00000101336|P08631-2|HCK;nc|ENSG00000101336|P08631-3|HCK;nc|ENSG00000101336|P08631-4|HCK 26.34127834903884 0.298120260672589 5 SQ{I|L}QD 5 7 17.344 0.0 0.0 1.7689 0.0 0.0 184.1118157836449 222.1256960504516 406.2375118340965 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.2887254899964357 SQ{I|L}QD 1.7689 - 371 + 1 2.121 75523.2 1.0 2459 4160 6619 SUDHL4_400M_050219_1,6621 SUDHL4_400M_050219_1,6621,LLMEIVTY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6622 34.751 517.0 126260.0 25 0 58097.0 -1 0 53 790.277374024233 0 790.2792846560478 PEAK CID FTMS 0 0 0 6619 113822.8125 0.4797086290933782 -4 0.0686073303222656 3 5 N 1 -1 3.4949 0.0 0.0 0.2214 0.0 0.0 1166.4226272535527 295.0463045709594 1461.468931824512 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.2214 - 3 + 1 2.121 53271.4 1.0 2460 4160 6619 SUDHL4_400M_050219_1,6622 SUDHL4_400M_050219_1,6622, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6624 34.755 17.0 2343200.0 25 0 416600.0 -1 VIMFPCPA 8 54 467.7316873233548 933.4488217135096 2 467.7317382693291 MULTI CID FTMS 0 0 0 6623 2908289.0 0.2011269319544829 21 -0.9195480346679688 1 Carbamidomethyl (C) _VIMFPC(Carbamidomethyl (C))PA_ ENSG00000163462|ENST00000334634|TRIM46;ENST00000468878.1_1_1:155147264-155152278:+|nuORF;nc|ENSG00000163462|Q7Z4K8-2|TRIM46;nc|ENSG00000163462|Q7Z4K8-3|TRIM46;nc|ENSG00000163462|Q7Z4K8-4|TRIM46;nc|ENSG00000163462|Q7Z4K8-5|TRIM46 6.354104778181461 0.7857632046190106 5 P 1 -1 10.969 0.0 0.0 1.1751 0.0 0.0 818.38464127093 0.0 818.38464127093 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.1751 + + 18 + 1 2.121 38381.3 1.0 2461 4161 6623 SUDHL4_400M_050219_1,6624 SUDHL4_400M_050219_1,6624,VIMFPCPA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6625 34.756 13.0 2621100.0 25 0 413640.0 14665 IIPGGIYDA 9 46 459.7492212910741 917.483889648948 2 459.7491638064384 MULTI CID FTMS 0 0 0 6623 3520352.0 0.3642276853441261 7 -0.2893409729003906 2 Unmodified _IIPGGIYDA_ ENSG00000101441|ENST00000217423|CST4 16.942295170755138 0.3780752226737986 5 {I|L}{I|L} 2 7 41.766 0.0 0.0 4.5522 0.0 0.0 0.0 688.294411560781 688.294411560781 36.28144697160131 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}{I|L} 4.5522 + + 15 + 1 2.121 32907.4 1.0 2462 4161 6623 SUDHL4_400M_050219_1,6625 SUDHL4_400M_050219_1,6625,IIPGGIYDA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6627 34.76 34.0 1590500.0 25 0 114530.0 -1 0 62 874.9054764860379 1747.7964000388756 2 874.9087402224541 MULTI CID FTMS 0 0 0 6626 1982132.625 0.6988717167876124 -5 0.0911979675292968 1 5 D{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 12 -1 45.288 0.0 0.0 2.5912 0.0 0.0 357.1535300211006 0.0 357.1535300211006 0.0 21.83992802389298 0.0 0.0 0 0.5 0.0 0.0 0.2742275032520141 D{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 2.5912 - 206 + 1 2.121 42312.6 1.0 2463 4162 6626 SUDHL4_400M_050219_1,6627 SUDHL4_400M_050219_1,6627, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6628 34.767 349.0 427600.0 25 0 27813.0 + 40490 VIRDVEQQF 9 138 567.3010735807321 1132.5875942282642 2 567.3008911013603 MULTI CID FTMS 0 0 0 6626 614926.0 0.338316351751603 -4 0.0740280151367187 2 Unmodified _VIRDVEQQF_ ENSG00000076003|ENST00000264156|MCM6 82.5293158979368 0.0169039238599547 5 [{I|L}V]RDVEQQ{M(Oxidation (M))|F} 9 0 + 90.116 0.0 0.0 7.9566 7.9566 92.467 0.0 0.0 0.0 19.2478773067036 16.478174818886373 16.478174818886373 8.45098040014257 0 1.2614393726401687 1.6989700043360187 0.6139829889124311 0.6747425010840047 + + [{I|L}V]RDVEQQ{M(Oxidation (M))|F};[{I|L}V]RDEVQQ{M(Oxidation (M))|F};[{I|L}V]RDVE[AG]Q{M(Oxidation (M))|F};[{I|L}V]RDVEQ[AG]{M(Oxidation (M))|F};[{I|L}V]RDEQVQ{M(Oxidation (M))|F};[{I|L}V]RDEV[AG]Q{M(Oxidation (M))|F};[{I|L}V]RDEVQ[AG]{M(Oxidation (M))|F};[{I|L}V]RDVE[AG][AG]{M(Oxidation (M))|F};[AG]N[K{I|L}]VEQQ{M(Oxidation (M))|F};[AG]GG[K{I|L}]VEQQ{M(Oxidation (M))|F} 7.9566;7.2105;7.1436;7.1436;6.5343;6.3975;6.3975;6.3344;6.2572;5.8849 +;-;-;-;-;-;-;-;-;- + 2047 1 2.121 115428.4 1.0 2464 4162 6626 SUDHL4_400M_050219_1,6628 SUDHL4_400M_050219_1,6628,VIRDVEQQF True True VIRDVEQQF 34.766544 567.30089110136 18290784.0 6626.0 ENSG00000076003|ENST00000264156|MCM6 5.226390600204468 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6629 34.77 163.0 275900.0 25 0 17934.0 + 39749 VELENFCSVQ 10 78 584.2688440019413 1166.5231350706824 2 584.2689697146416 MULTI CID FTMS 0 0 0 6626 274362.53125 0.4890879954970663 -4 0.0740280151367187 3 Unmodified _VELENFCSVQ_ REV__ENSG00000213619|ENST00000263774|NDUFS3;REV__ENST00000533507.5_1_11:47602194-47606030:+|nuORF;REV__nc|ENSG00000213619|O75489-2|NDUFS3 9.38312468134398 0.6832340498775793 5 V 1 -1 16.594 0.0 0.0 1.4225 0.0 0.0 1049.4432228165792 0.0 1049.4432228165792 0.0 0.2178754392972521 0.0 0.0 0 0.5 0.0 0.0 0.0 V 1.4225 + + 27 + 1 2.121 38936.0 1.0 2465 4162 6626 SUDHL4_400M_050219_1,6629 SUDHL4_400M_050219_1,6629,VELENFCSVQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6630 34.773 194.0 186170.0 25 0 21741.0 + -1 LIWVGCSPL 9 76 522.7822878039254 1043.5500226746508 2 523.2855712771416 MULTI CID FTMS 0 0 0 6626 162725.8125 0.740470517519786 -2 0.03399658203125 4 Carbamidomethyl (C) _LIWVGC(Carbamidomethyl (C))SPL_ REV__ENST00000224950.7_1_10:105677279-105677345:-|nuORF 13.50788311687929 0.4710407108020397 5 {I|L}D[RH][QT]Y 7 -1 15.986 0.0 0.0 1.5319 0.0 0.0 112.09215021546954 0.0 112.09215021546954 0.0 3.996294548824366 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D[RH][QT]Y 1.5319 - 67 + 1 2.121 37018.9 1.0 2466 4162 6626 SUDHL4_400M_050219_1,6630 SUDHL4_400M_050219_1,6630,LIWVGCSPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6632 34.778 16.0 2663800.0 25 0 283950.0 -1 KKCMMLLSCCT 11 54 732.31307621608 1462.61159949896 2 732.3132202029228 MULTI CID FTMS 0 0 0 6631 2777488.75 0.6680858487178112 4 -0.2045249938964843 1 3 Carbamidomethyl (C),2 Oxidation (M) _KKC(Carbamidomethyl (C))M(Oxidation (M))M(Oxidation (M))LLSC(Carbamidomethyl (C))C(Carbamidomethyl (C))T_ ENST00000579456.5_1_17:57759990-57760286:+|nuORF 2.9952420565917617 0.861016188266951 5 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 60.807 0.0 0.0 4.1574 0.0 0.0 378.1667042462906 0.0 378.1667042462906 0.0 43.8173657553704 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.4247425010840047 DEAQQNA{M(Oxidation (M))|F}Y 4.1574 - 189 1 2.121 36546.2 1.0 2467 4163 6631 SUDHL4_400M_050219_1,6632 SUDHL4_400M_050219_1,6632,KKCMMLLSCCT False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6633 34.789 652.0 162160.0 25 0 12894.0 + + 11178 KYEELQIT 8 150 512.2659535043399 1022.5173540754798 2 512.2670776247978 MULTI CID FTMS 0 0 0 6631 202180.375 0.2478783243110617 17 -0.844940185546875 2 Unmodified _GELRFGMLT_ P04264;ENSG00000185479|ENST00000252252|KRT6B;ENSEMBL:ENSBTAP00000038253;ENSG00000167768|ENST00000252244|KRT1 20.453626601364224 0.2830276176381075 5 Q{I|L}E{[MG]|[TS]}{I|L}T 7 -1 27.656 0.0 0.0 2.7047 0.0 0.0 232.1308429180227 0.0 232.1308429180227 0.0 15.18191981982554 0.0 0.0 0 0.0 0.0 1.1153565665482863 0.3807196863200844 Q{I|L}E{[MG]|[TS]}{I|L}T 2.7047 - 780 + 1 2.121 85900.9 1.0 2468 4163 6631 SUDHL4_400M_050219_1,6633 SUDHL4_400M_050219_1,6633,GELRFGMLT False False KYEELQIT 34.788965 512.267077624798 361478.0 6631.0 P04264;;ENSG00000185479|ENST00000252252|KRT6B;;ENSEMBL:ENSBTAP00000038253;;ENSG00000167768|ENST00000252244|KRT1 0.6829402142514786 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6634 34.792 137.0 313600.0 25 0 34410.0 + 42678 VTVTASCSSS 10 67 471.2164467857843 940.4183406383686 2 471.2159301638603 MULTI CID FTMS 0 0 0 6631 352910.09375 0.2711254428277982 11 -0.6449851989746094 3 Unmodified _VTVTASCSSS_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 6.2057823575117 0.6979311171683138 5 VT 2 -1 20.969 0.0 0.0 2.2298 0.0 0.0 0.0 737.2803963564282 737.2803963564282 10.590496560389973 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VT 2.2298 + + 23 + 1 2.121 38046.8 1.0 2469 4163 6631 SUDHL4_400M_050219_1,6634 SUDHL4_400M_050219_1,6634,VTVTASCSSS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6636 34.796 19.0 2903400.0 25 0 494880.0 + 38352 TQMPDPKTF 9 73 532.7564879003567 1063.4984228675132 2 532.7563354372978 MULTI CID FTMS 0 0 0 6635 2340922.75 0.5122568778390055 -3 0.0408973693847656 1 Unmodified _TQMPDPKTF_ ENSG00000120963|ENST00000311212|ZNF706 53.832793166522166 0.0319663582346103 5 [QT]M{[ET]|[MV]}{M(Oxidation (M))|F}TP 8 5 41.464 0.0 0.0 3.8988 0.0 0.0 0.0 125.07268701724844 125.07268701724844 8.381681563112402 0.0 0.0 0.0 0 0.9247425010840048 1.0969100130080565 0.4247425010840047 0.0 [QT]M{[ET]|[MV]}{M(Oxidation (M))|F}TP 3.8988 - 197 + 1 2.121 44773.7 1.0 2470 4164 6635 SUDHL4_400M_050219_1,6636 SUDHL4_400M_050219_1,6636,TQMPDPKTF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6637 34.798 74.0 538520.0 25 0 39778.0 + 5625 DPCIYKFYEFY 11 52 744.330121338148 1486.645689743096 2 744.3298828005791 MULTI CID FTMS 0 0 0 6635 334568.375 0.2246346676921432 -3 0.0408973693847656 2 Unmodified _DPCIYKFYEFY_ REV__ENSG00000163840|ENST00000296161|DTX3L 5.731851221503515 0.8481046878870278 5 DEAQQNA[Y{M(Oxidation (M))|F}] 9 -1 58.109 0.0 0.0 3.9087 0.0 0.0 402.2002125470719 0.0 402.2002125470719 0.0 37.81865655543953 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 DEAQQNA[Y{M(Oxidation (M))|F}] 3.9087 - 234 1 2.121 32662.2 1.0 2471 4164 6635 SUDHL4_400M_050219_1,6637 SUDHL4_400M_050219_1,6637,DPCIYKFYEFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6638 34.81 706.0 347160.0 25 0 66264.0 19613 LGAYFNRV 8 160 470.25744904352695 0 470.2571899294853 PEAK CID FTMS 0 0 0 6635 176585.34375 0.6944020432686769 5 -0.2985725402832031 3 Unmodified _LGAYFNRV_ ENSG00000108556|ENST00000649488|CHRNE;ENST00000572438.1_1_17:4802033-4804946:-|nuORF 11.114462752807354 0.5290325060821968 5 D 1 8 9.2388 0.0 0.0 0.98442 0.0 0.0 752.3992079241649 68.05151544742421 820.4507233715891 0.0 0.0 0.0 0.0 0 0.5 0.0 0.1139829889124311 0.0 D 0.98442 - 89 + 1 2.121 191601.2 1.0 2472 4164 6635 SUDHL4_400M_050219_1,6638 SUDHL4_400M_050219_1,6638,LGAYFNRV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6639 34.823 749.0 270590.0 25 0 23232.0 + 41955 VQIPPSTTY 9 175 503.26630454779126 1004.5180561623824 2 503.2647582888603 MULTI CID FTMS 0 0 0 6635 130595.1875 0.8669586785363392 -1 0.0182647705078125 4 Unmodified _VQIPPSTTY_ ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906|ILF3 14.838274106304384 0.4350285940865338 5 {NN|[MP]|[D{I|L}]|[EV]}[PG]RREY 8 6 {NN|[MP]|[D{I|L}]|[EV]}[PG]RRE + + 13.979 -8.201 -0.99594 1.3917 1.3917 52.622 0.0 0.0 0.0 0.0 -5.484550065040281 -5.484550065040281 0.0 0 0.0 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[PG]RREY 1.3917 - 260 + 1 2.121 153095.6 1.0 2473 4164 6635 SUDHL4_400M_050219_1,6639 SUDHL4_400M_050219_1,6639,VQIPPSTTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6641 34.84 761.0 265000.0 25 0 14351.0 -1 0 124 910.9156306721646 1819.8167084111287 2 910.9162475466728 MULTI CID FTMS 0 0 0 6640 218838.625 0.2386979514307317 21 -0.9238014221191406 1 5 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQRGD{M(Oxidation (M))|F}{I|L}Q 15 -1 + 74.915 0.0 0.0 4.1166 4.1166 81.934 0.0 0.0 0.0 7.61760834195475 12.525749891599531 7.61760834195475 7.04119982655925 0 1.7179001828205482 0.0 0.6505149978319906 1.4731975075880328 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQRGD{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PM{I|L}PEEQRGD{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PM{I|L}PEE[{I|L}V]ED{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PM{I|L}PEE[AG]RGD{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}N{M(Oxidation (M))|F}N{M(Oxidation (M))|F}QDQ{I|L}MP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PM{I|L}PE[QP][MN]D{M(Oxidation (M))|F}{I|L}Q;[VP]QN{M(Oxidation (M))|F}N{M(Oxidation (M))|F}QDQ{I|L}MP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EEQRGD{M(Oxidation (M))|F}{I|L}Q;{[YD]|[{M(Oxidation (M))|F}M]}E{I|L}{M(Oxidation (M))|F}GD[{M(Oxidation (M))|F}V]RGD{M(Oxidation (M))|F}{I|L}Q;[Y{I|L}]A[HT]NEEQRGD{M(Oxidation (M))|F}{I|L}Q 4.1166;3.7297;3.4641;3.2334;3.2162;2.9581;2.9296;2.8715;2.8553;2.8514 -;-;-;-;-;-;-;-;-;- 2433 + 1 2.107 132768.1 1.0 2474 4165 6640 SUDHL4_400M_050219_1,6641 SUDHL4_400M_050219_1,6641, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6642 34.853 800.0 196570.0 25 0 9294.5 + 28643 PVKAGSVP 8 225 377.7252125578565 753.435872182513 2 377.7248718142509 MULTI CID FTMS 0 0 0 6640 92686.9140625 0.5972825586248318 4 -0.2670707702636719 2 Unmodified _PVKAGSVP_ REV__ENST00000360943.9_1_17:47004563-47004818:+|nuORF 5.230669730166228 0.792582437072536 5 P 1 -1 8.3683 0.0 0.0 1.1107 0.0 0.0 638.3718366984294 0.0 638.3718366984294 0.0 -1.8089669742480687 -1.8089669742480687 0.0 0 0.0 0.0 0.0 0.0 P 1.1107 + + 67 + 1 2.107 123239.0 0.7099999785423279 2475 4165 6640 SUDHL4_400M_050219_1,6642 SUDHL4_400M_050219_1,6642,PVKAGSVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6643 34.867 800.0 149460.0 25 0 6783.7 -1 NQVMLQMTESH 11 140 675.2972824826767 1348.5800120321533 2 675.2970458865166 MULTI CID FTMS 0 0 0 6640 75504.9921875 0.2845825969931408 -4 0.0723991394042968 3 2 Oxidation (M) _NQVM(Oxidation (M))LQM(Oxidation (M))TESH_ ENST00000471947.1_1_2:55633152-55646215:-|nuORF 8.155526934196011 0.8366696279279818 5 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQNA{[CA]|SS} 14 -1 + 62.578 0.0 0.0 4.6403 4.6403 80.385 0.0 0.0 0.0 8.250735009262115 7.569619513137056 7.569619513137056 3.38952832888669 0 0.5 1.0 0.0 1.1237125054200234 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQNA{[CA]|SS};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQQNA{[CA]|SS};{[QN]|[E{I|L}]|[KN]}A{[DS]|[MA]|[CV]|TT}EAQQNA{[CA]|SS};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EA[AG]QNA{[CA]|SS};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQ[AG]NA{[CA]|SS};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQGGA{[CA]|SS};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQNA{[CA]|SS};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EA[AG]QNA{[CA]|SS};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQ[AG]NA{[CA]|SS};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQQGGA{[CA]|SS} 4.6403;4.3889;4.0285;3.9692;3.9692;3.9692;3.8897;3.7162;3.7162;3.7162 -;-;-;-;-;-;-;-;-;- 2135 1 2.107 91883.0 0.8700000047683716 2476 4165 6640 SUDHL4_400M_050219_1,6643 SUDHL4_400M_050219_1,6643,NQVMLQMTESH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6644 34.881 800.0 120970.0 25 0 7344.6 -1 0 98 849.8653672887993 1697.7161816443986 2 849.8662597537041 MULTI CID FTMS 0 0 0 6640 136950.296875 1.0 0 0.0 4 5 {[QG]|[NA]}GAG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NEAQQNA{M(Oxidation (M))|F}Y 16 -1 + 74.405 0.0 0.0 4.3827 4.3827 76.725 0.0 0.0 0.0 10.476919903378745 4.296583177684127 4.296583177684127 1.0551018476997456 0 0.6822333069283655 0.8538719643217619 0.4247425010840047 1.079689690656103 {[QG]|[NA]}GAG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{[CP]|[EA]}TGEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQ{[CP]|[EA]}TGEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QG{[CP]|[EA]}TGEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GGEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GWWNEAQQNA{M(Oxidation (M))|F}Y 4.3827;4.3205;4.3205;4.0886;4.0254;4.0254;3.9875;3.9243;3.9243;3.9004 -;-;-;-;-;-;-;-;-;- 3645 1 2.107 70254.3 0.9300000071525574 2477 4165 6640 SUDHL4_400M_050219_1,6644 SUDHL4_400M_050219_1,6644, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6646 34.886 49.0 1167500.0 25 0 270710.0 27002 PEKWESVKL 9 68 558.3085001953657 1114.6024474575313 2 558.3083984255791 MULTI CID FTMS 0 0 0 6645 1022575.5 0.7188707567568423 3 -0.2089614868164062 1 Unmodified _PEKWESVKL_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 24.99096001346401 0.2132109383330889 5 [EP]K{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{I|L} 8 4 49.359 0.0 0.0 4.4284 0.0 0.0 0.0 125.07385794020628 125.07385794020628 21.123956595632546 0.0 0.0 0.0 0 1.424742501084005 1.0 0.9247425010840048 0.0 [EP]K{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V{I|L} 4.4284 - 169 1 2.098 49450.1 1.0 2478 4166 6645 SUDHL4_400M_050219_1,6646 SUDHL4_400M_050219_1,6646,PEKWESVKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6647 34.9 800.0 166510.0 25 0 11031.0 + 19974 LIIGYLFFFS 10 147 407.2310889688428 1218.6714375067284 3 407.2302734255791 MULTI CID FTMS 0 0 0 6645 64260.8984375 0.0906352368823557 6 -0.3836135864257812 2 Unmodified _LIIGYLFFFS_ REV__ENSG00000046653|ENST00000316715|GPM6B;REV__nc|ENSG00000046653|Q13491-2|GPM6B;REV__nc|ENSG00000046653|Q13491-3|GPM6B;REV__nc|ENSG00000046653|Q13491|GPM6B 14.838274106304384 0.5985701837916485 5 {I|L}{I|L}{I|L} 3 -1 49.693 0.0 0.0 4.0776 0.0 0.0 0.0 876.3980760111609 876.3980760111609 40.54404618153882 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {I|L}{I|L}{I|L} 4.0776 + + 95 + 1 2.098 107015.3 0.9200000166893004 2479 4166 6645 SUDHL4_400M_050219_1,6647 SUDHL4_400M_050219_1,6647,LIIGYLFFFS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6648 34.905 272.0 278910.0 25 0 25832.0 + 41924 VQHGVEGLTY 10 111 551.7792819268429 1101.5440109204858 2 551.7794067263603 MULTI CID FTMS 0 0 0 6645 309250.34375 1.0 0 0.0 3 Unmodified _VQHGVEGLTY_ ENSG00000114744|ENST00000473414|COMMD2;ENST00000463077.5_1_3:149459310-149470177:-|nuORF;ENST00000469896.1_1_3:149468461-149470237:-|nuORF;nc|ENSG00000114744|Q86X83-2|COMMD2 45.739877483867886 0.1051543674217965 5 {[QV]|[N{I|L}]|[RA]|[KV]}HGEVG{I|L}TY 10 2 + 65.622 0.0 0.0 5.9573 5.9573 81.358 0.0 0.0 0.0 2.749758240156872 15.026975159433531 2.749758240156872 1.020599913279625 0 1.0 0.0 0.5 0.4916440611282626 {[QV]|[N{I|L}]|[RA]|[KV]}HGEVG{I|L}TY;{[QV]|[N{I|L}]|[RA]|[KV]}HGVEG{I|L}TY;{[VA]|[{I|L}G]}GHGEVG{I|L}TY;{[VA]|[{I|L}G]}GHGVEG{I|L}TY;{[HG]|PP}VAGEVG{I|L}TY;{[QV]|[N{I|L}]|[RA]|[KV]}HGEVAVTY;{[HG]|PP}VAGVEG{I|L}TY;{[QV]|[N{I|L}]|[RA]|[KV]}HDAVG{I|L}TY;{[VA]|[{I|L}G]}GHDAVG{I|L}TY;{[QV]|[N{I|L}]|[RA]|[KV]}HGVEAVTY 5.9573;5.8646;5.7077;5.615;5.5757;5.5241;5.4831;5.4467;5.4344;5.4315 -;+;-;-;-;-;-;-;-;- + 2997 1 2.098 63061.7 1.0 2480 4166 6645 SUDHL4_400M_050219_1,6648 SUDHL4_400M_050219_1,6648,VQHGVEGLTY True True VQHGVEGLTY 34.904716 551.77940672636 1716761.625 6645.0 nc|ENSG00000114744|Q86X83-2|COMMD2;;ENSG00000114744|ENST00000473414|COMMD2;;ENST00000469896.1_1_3:149468461-149470237:-|nuORF;;ENST00000463077.5_1_3:149459310-149470177:-|nuORF 7.390262603759766 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6649 34.917 708.0 370650.0 25 0 27004.0 + 1741 ALQEVLKTA 9 179 486.78991859428464 971.5652842553692 2 486.7901489138603 MULTI CID FTMS 0 0 0 6645 253046.234375 0.4512140656331874 -2 0.0896110534667968 4 Unmodified _ALQEVLKTA_ ENSG00000112306|ENST00000230050|RPS12;ENST00000484616.2_1_6:133135907-133136327:+|nuORF 80.6760300276096 0.0173529540220427 5 [{I|L}A]QEV{I|L}KTA 9 0 + 91.523 0.0 0.0 9.4202 9.4202 95.248 0.0 0.0 0.0 46.84128648322088 17.10721798762735 17.10721798762735 9.208187539523747 0 1.6791746928241125 2.0 1.863982988912431 0.3807196863200844 + + [{I|L}A]QEV{I|L}KTA;[{I|L}A][AG]EV{I|L}KTA;[{I|L}A]GD{I|L}KTAA{I|L};[{I|L}A]GAEV[KT]A{I|L};[{I|L}A]QEV[KT]A{I|L};[{I|L}A]GD{I|L}A[KT]A{I|L};AADV{I|L}KTAA{I|L};[AG]EV{I|L}KTAA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}KTAA{I|L};AAVD{I|L}KTAA{I|L} 9.4202;8.4724;5.8867;5.1156;4.9344;4.8666;4.5165;4.2946;4.1627;4.0886 +;-;-;-;-;-;-;-;-;- + 3016 + 1 2.098 199317.4 1.0 2481 4166 6645 SUDHL4_400M_050219_1,6649 SUDHL4_400M_050219_1,6649,ALQEVLKTA True True ALQEVLKTA 34.917006 486.79014891386 3190882.25 6645.0 ENSG00000112306|ENST00000230050|RPS12;;ENST00000484616.2_1_6:133135907-133136327:+|nuORF 5.693919817606608 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6650 34.924 405.0 245060.0 25 0 21074.0 + 34348 LGRSIYEY 8 139 500.8109920194543 0 500.8108093142509 PEAK CID FTMS 0 0 0 6645 152145.296875 1.0 0 0.0 5 Unmodified _SLSRGALIAI_ nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A;ENSG00000100644|ENST00000337138|HIF1A 14.838274106304384 0.3381107837965078 5 A{I|L} 2 8 17.831 0.0 0.0 1.7838 0.0 0.0 245.17096021882315 567.290834631072 812.4617948498951 0.0 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.0 0.0 + A{I|L} 1.7838 + + 191 + 1 2.098 80277.3 1.0 2482 4166 6645 SUDHL4_400M_050219_1,6650 SUDHL4_400M_050219_1,6650,SLSRGALIAI False False LGRSIYEY 34.924241 500.810809314251 668040.25 6645.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 0.0183132588863372 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6651 34.934 533.0 303420.0 25 0 26514.0 + + 38762 ILDEMSHKL 9 212 362.1931631302021 1083.5576599908063 3 362.5265075564384 MULTI CID FTMS 0 0 0 6645 131498.703125 1.0 0 0.0 6 Unmodified _TVCRNLGKHG_ ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT 5.783430956126388 0.6998847395148697 5 {NN|[MP]|[D{I|L}]|[EV]}[RV]MED{I|L} 8 -1 23.141 0.0 0.0 2.1356 0.0 0.0 0.0 109.0567729463426 109.0567729463426 9.46858230198188 0.0 0.0 0.0 0 0.0 1.154901959985743 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}[RV]MED{I|L} 2.1356 - 146 1 2.098 128191.8 1.0 2483 4166 6645 SUDHL4_400M_050219_1,6651 SUDHL4_400M_050219_1,6651,TVCRNLGKHG False False ILDEMSHKL 34.933616 362.526507556438 611038.4375 6645.0 ENSG00000116906|ENST00000366647|GNPAT;;nc|ENSG00000116906|O15228-2|GNPAT 5.030810991923015 3.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6652 34.947 800.0 222930.0 25 0 11752.0 + 38346 TQMPDPKTF 9 187 540.7549114599173 1079.4952699866344 2 540.7555419802666 MULTI CID FTMS 0 0 0 6645 113811.2421875 0.7245686908458826 -4 0.1252517700195312 7 Oxidation (M) _TQM(Oxidation (M))PDPKTF_ ENSG00000120963|ENST00000311212|ZNF706 74.19965305603844 0.0194755241623067 5 [QT]{M(Oxidation (M))|F}PDPKT 8 1 53.565 0.0 0.0 4.962 0.0 0.0 0.0 162.05654321842033 162.05654321842033 37.49020551089738 0.0 0.0 0.0 0 1.2887254899964358 0.721246399047171 1.3076556684809653 0.0 + [QT]{M(Oxidation (M))|F}PDPKT 4.962 + + 2612 + 1 2.098 138573.5 0.8700000047683716 2484 4166 6645 SUDHL4_400M_050219_1,6652 SUDHL4_400M_050219_1,6652,TQMPDPKTF True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6653 34.95 108.0 233550.0 25 0 19574.0 + + 30749 AVHDITVAY 9 56 494.25861327937264 986.5026736255452 2 494.7589294314384 MULTI CID FTMS 0 0 0 6645 540623.1875 0.703332130482289 5 -0.2999610900878906 8 Unmodified _RHGTRPTY_ nc|ENSG00000172954|Q6UWP7|LCLAT1;ENSG00000172954|ENST00000379509|LCLAT1 7.910154910731844 0.7763180056447161 5 AY 2 -1 20.969 0.0 0.0 2.1256 0.0 0.0 734.3906873968328 0.0 734.3906873968328 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 2.1256 - 16 + 1 2.098 27221.7 1.0 2485 4166 6645 SUDHL4_400M_050219_1,6653 SUDHL4_400M_050219_1,6653,RHGTRPTY False False AVHDITVAY 34.94972 494.758929431438 4698470.5 6645.0 nc|ENSG00000172954|Q6UWP7|LCLAT1;;ENSG00000172954|ENST00000379509|LCLAT1 4.826221386591594 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6654 34.965 800.0 47841.0 25 0 11866.0 -1 0 32 1197.1576284122457 3588.451055836937 3 1198.490893542767 MULTI CID FTMS 0 0 0 6645 99252.546875 0.4740748817585936 -4 0.1252517700195312 9 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.19478 0.0 0.0 2202.774006131662 1235.6012107497884 3438.375216881451 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19478 - 1 + 1 2.098 39288.6 0.5799999833106995 2486 4166 6645 SUDHL4_400M_050219_1,6654 SUDHL4_400M_050219_1,6654, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6655 34.972 431.0 190610.0 25 0 11869.0 + 20366 LLGNAVKEHRT 11 136 413.2389218098328 0 413.2396118044853 PEAK CID FTMS 0 0 0 6645 93729.5546875 0.3817633064146343 -7 0.1875495910644531 10 Unmodified _LLGNAVKEHRT_ REV__ENSG00000125991|ENST00000348547|ERGIC3;REV__ENST00000488384.1_1_20:34144716-34145272:+|nuORF;REV__nc|ENSG00000125991|Q9Y282-3|ERGIC3 5.731851221503515 0.47618401536486 5 {I|L} 1 -1 1.9897 0.0 0.0 0.24133 0.0 0.0 527.3075422507219 181.0469149225219 708.3544571732438 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.24133 + + 7 + 1 2.098 69139.3 1.0 2487 4166 6645 SUDHL4_400M_050219_1,6655 SUDHL4_400M_050219_1,6655,LLGNAVKEHRT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6656 34.978 274.0 216020.0 25 0 15070.0 19007 LDKDAGRTPL 10 116 543.2990476351079 1084.5835423370156 2 543.2860595583916 MULTI CID FTMS 0 0 0 -1 0 11 Unmodified _LDKDAGRTPL_ ENST00000538502.5_2_1:109869643-109869715:-|nuORF 10.073929032068715 0.6785112666868882 5 {I|L}{I|L} 2 8 37.959 0.0 0.0 3.4999 0.0 0.0 0.0 855.3676851861936 855.3676851861936 23.73371817181301 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L} 3.4999 - 91 + 1 2.098 50512.5 1.0 2488 4166 6645 SUDHL4_400M_050219_1,6656 SUDHL4_400M_050219_1,6656,LDKDAGRTPL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6658 34.983 54.0 755970.0 25 0 251060.0 652 AELSLVPAP 9 56 448.7581444757428 895.5017360182856 2 448.7581054568291 MULTI CID FTMS 0 0 0 6657 775049.125 0.024061446524698 22 -0.89300537109375 1 Unmodified _AELSLVPAP_ ENSG00000135436|ENST00000257894|FAM186B;ENST00000533372.1_1_12:49976813-49999059:-|nuORF;nc|ENSG00000135436|Q8IYM0-2|FAM186B 21.74664581756881 0.2544899275067181 5 [VP]{I|L}GET 6 8 24.895 0.0 0.0 2.78 0.0 0.0 0.0 296.1659565595544 296.1659565595544 8.723637474483468 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [VP]{I|L}GET 2.78 - 145 1 2.092 40055.8 1.0 2489 4167 6657 SUDHL4_400M_050219_1,6658 SUDHL4_400M_050219_1,6658,AELSLVPAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6659 34.986 184.0 405270.0 25 0 127920.0 + 40770 VLLAAGPSAA 10 73 435.2582346652212 868.5019163972423 2 435.2584106326103 MULTI CID FTMS 0 0 0 6657 180338.34375 0.2744364420671604 1 -0.0621833801269531 2 Unmodified _VLLAAGPSAA_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 23.1484247019978 0.4485954791219598 5 [{I|L}V]{I|L} 3 7 23.952 0.0 0.0 2.7579 0.0 0.0 0.0 540.2424003662454 540.2424003662454 10.853481135844874 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [{I|L}V]{I|L} 2.7579 + + 84 1 2.092 65524.6 1.0 2490 4167 6657 SUDHL4_400M_050219_1,6659 SUDHL4_400M_050219_1,6659,VLLAAGPSAA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6660 34.989 117.0 565330.0 25 0 88950.0 + -1 SHVAVENALG 10 87 519.7640714951971 1037.513590057194 2 519.7644531130791 MULTI CID FTMS 0 0 0 6657 445562.84375 0.639532372926119 -1 0.096649169921875 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SHVAVENALG_ ENST00000480592.5_1_X:41193505-41196960:+|nuORF;nc|ENSG00000215301|O00571-2|DDX3X;ENSG00000215301|ENST00000644876|DDX3X 24.99096001346401 0.4071966087057876 5 {[YC]|[HE]}VAVENA{[VA]|[{I|L}G]} 10 -1 + 56.031 0.0 0.0 5.4005 5.4005 87.654 0.0 0.0 0.0 9.884381005764311 40.5462187404089 9.884381005764311 9.164539485499256 0 0.5 0.0 0.2614393726401688 0.0 {[YC]|[HE]}VAVENA{[VA]|[{I|L}G]};{[YC]|[HE]}VAVEGGA{[VA]|[{I|L}G]};[{I|L}A][HD]VENA{[VA]|[{I|L}G]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NEV[{M(Oxidation (M))|F}T]{[VA]|[{I|L}G]};[{I|L}A][HD]VEGGA{[VA]|[{I|L}G]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GGEV[{M(Oxidation (M))|F}T]{[VA]|[{I|L}G]};{[WT]|[RM]}{[QS]|[NT]}V[{M(Oxidation (M))|F}T]{[VA]|[{I|L}G]};{[YC]|[HE]}[R{I|L}][WQ]{[VA]|[{I|L}G]};{[WT]|[RM]}[WK][{M(Oxidation (M))|F}T]{[VA]|[{I|L}G]};{[WT]|[RM]}{[QS]|[NT]}[TP]RY 5.4005;4.5172;3.3853;3.0018;2.502;2.1143;1.1945;1.1123;0.57013;0.39544 -;-;-;-;-;-;-;-;-;- 134 1 2.092 56563.4 1.0 2491 4167 6657 SUDHL4_400M_050219_1,6660 SUDHL4_400M_050219_1,6660,SHVAVENALG False False SHVAVENALG 34.98857 519.764453113079 3683627.75 6657.0 ENST00000480592.5_1_X:41193505-41196960:+|nuORF;;nc|ENSG00000215301|O00571-2|DDX3X;;ENSG00000215301|ENST00000644876|DDX3X 7.232187271118164 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6661 34.991 109.0 494250.0 25 0 53623.0 + 12076 GQFPGHNEF 9 95 516.7305607301898 1031.4465685271796 2 516.7307006716728 MULTI CID FTMS 0 0 0 6657 316802.0625 0.3705833132584953 27 -1.0935897827148438 4 Unmodified _GQFPGHNEF_ ENSG00000163171|ENST00000295324|CDC42EP3 29.081581746732265 0.1611639662936252 5 {[QG]|[NA]}{M(Oxidation (M))|F}P 4 5 32.435 0.0 0.0 3.1446 0.0 0.0 0.0 599.2175387018186 599.2175387018186 12.324185794871472 0.0 0.0 0.0 0 0.9247425010840048 0.6989700043360187 0.0 0.0 + {[QG]|[NA]}{M(Oxidation (M))|F}P 3.1446 + + 195 + 1 2.092 46565.4 1.0 2492 4167 6657 SUDHL4_400M_050219_1,6661 SUDHL4_400M_050219_1,6661,GQFPGHNEF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6662 34.994 142.0 353970.0 25 0 53604.0 + 15104 IMRAGMSSL 9 85 483.2487709424613 964.4829889517224 2 483.2489501833916 MULTI CID FTMS 0 0 0 6657 310961.96875 0.6885483491397525 -2 0.1547584533691406 5 Unmodified _IMRAGMSSL_ ENSG00000132141|ENST00000314144|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENST00000466479.1_1_7:56130338-56130775:+|nuORF;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A 57.72198328787511 0.0273433238377839 5 {[TV]|[{I|L}S]}{[TV]|[{I|L}S]}QMSS{I|L} 9 4 + 61.735 0.0 0.0 6.4009 6.4009 91.024 0.0 0.0 0.0 11.755916339312051 50.315267611971294 11.755916339312051 9.208187539523747 0 1.305462187404089 1.3979400086720375 0.9049471895720984 0.0 {[TV]|[{I|L}S]}{[TV]|[{I|L}S]}QMSS{I|L};{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}[AG]MSS{I|L};{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}[KC]DS{I|L};{[CA]|SS}{I|L}{I|L}QMSS{I|L};[VS][{I|L}T]QMSS{I|L};[VS][WR]MSS{I|L};{[CA]|SS}{I|L}{I|L}[AG]MSS{I|L};{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}[KC]SD{I|L};[VS][{I|L}T][AG]MSS{I|L};{[CA]|SS}{I|L}{I|L}[KC]DS{I|L} 6.4009;5.4461;4.8688;4.8643;4.6526;3.981;3.9095;3.7011;3.6979;3.3322 -;-;-;-;-;-;-;-;-;- 279 1 2.092 43949.2 1.0 2493 4167 6657 SUDHL4_400M_050219_1,6662 SUDHL4_400M_050219_1,6662,IMRAGMSSL True True IMRAGMSSL 34.993747 483.248950183392 2462343.75 6657.0 nc|ENSG00000132141|Q92526-3|CCT6B;;ENSG00000146731|ENST00000275603|CCT6A;;ENSG00000132141|ENST00000314144|CCT6B;;nc|ENSG00000132141|Q92526-2|CCT6B;;nc|ENSG00000146731|P40227-2|CCT6A;;ENST00000466479.1_1_7:56130338-56130775:+|nuORF 5.034837961196899 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6663 34.998 245.0 274950.0 25 0 21571.0 -1 0 67 881.9137274822971 1761.812902031394 2 881.9136840701103 MULTI CID FTMS 0 0 0 6657 270678.125 0.2361078612520877 -6 0.2271575927734375 6 5 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ{[{M(Oxidation (M))|F}C]|[YS]}[KP]{I|L}Q 15 -1 + 70.288 0.0 0.0 3.9895 3.9895 88.164 0.0 0.0 0.0 48.83471251333795 2.9048498545736834 2.9048498545736834 70.28836270845879 0 1.3494850021680094 0.0 0.0 0.7742275032520141 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ{[{M(Oxidation (M))|F}C]|[YS]}[KP]{I|L}Q 3.9895 - 201 + 1 2.092 50335.5 1.0 2494 4167 6657 SUDHL4_400M_050219_1,6663 SUDHL4_400M_050219_1,6663, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6664 35.002 206.0 286680.0 25 0 24633.0 + 10099 FPTSQRLPA 9 88 508.7800175004863 1015.5454820677726 2 508.7805358767509 MULTI CID FTMS 0 0 0 6657 243233.9375 0.2195820421034053 18 -0.7547264099121094 7 Unmodified _FPTSQRLPA_ ENST00000399831.7_1_8:38965091-38975631:+|nuORF 25.399314129420983 0.2080152500878129 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GRRGTP 8 6 44.117 0.0 0.0 4.3442 0.0 0.0 0.0 144.0452842298263 144.0452842298263 20.21987101785126 0.0 0.0 0.0 0 0.0 2.0 0.7742275032520141 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GRRGTP 4.3442 - 110 1 2.092 54139.1 1.0 2495 4167 6657 SUDHL4_400M_050219_1,6664 SUDHL4_400M_050219_1,6664,FPTSQRLPA False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6665 35.007 264.0 274340.0 25 0 42909.0 + 11648 GLATDVQTV 9 98 452.2428052144919 902.4710574957836 2 452.2429687380791 MULTI CID FTMS 0 0 0 6657 167288.328125 0.0187945534600232 18 -0.7547264099121094 8 Unmodified _GLATDVQTV_ ENSG00000277791|ENST00000619426|PSMB3 30.22481116460888 0.1466181017706357 5 {[VA]|[{I|L}G]}A 3 6 22.676 0.0 0.0 2.5127 0.0 0.0 0.0 658.3044674901774 658.3044674901774 4.210888136277028 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {[VA]|[{I|L}G]}A 2.5127 + + 139 1 2.092 58860.1 1.0 2496 4167 6657 SUDHL4_400M_050219_1,6665 SUDHL4_400M_050219_1,6665,GLATDVQTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6666 35.021 800.0 175010.0 25 0 8661.2 + 17879 KQMEDGHTLF 10 168 603.284163812361 1204.553774691522 2 603.2853271365166 MULTI CID FTMS 0 0 0 6657 155327.859375 0.9054580331188168 -1 0.096649169921875 9 Unmodified _KQMEDGHTLF_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1;UHRF1-KDM4B|1|fusion;UHRF1-KDM4B|2|fusion 45.739877483867886 0.1051543674217965 5 K[RH]{I|L}E[C(Carbamidomethyl (C))C]{I|L}{M(Oxidation (M))|F} 9 7 + 29.56 0.0 0.0 2.454 2.454 78.969 0.0 0.0 0.0 4.00035782629692 1.922262144776358 1.922262144776358 7.558748556724915 0 0.9247425010840048 0.0 1.0189301784845295 0.0 K[RH]{I|L}E[C(Carbamidomethyl (C))C]{I|L}{M(Oxidation (M))|F};K[RH]{I|L}E[C(Carbamidomethyl (C))C]{M(Oxidation (M))|F}{I|L};{[HG]|PP}T[MD]E{I|L}{M(Oxidation (M))|F}QK;[HT]G[MD]E{I|L}{M(Oxidation (M))|F}QK;{[HG]|PP}T[MD]EQK{I|L}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[HC]DD{I|L}{M(Oxidation (M))|F}QK;[HT]G[MD]EQK{I|L}{M(Oxidation (M))|F};KQM{[{M(Oxidation (M))|F}D]|MM}[YN]{I|L}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[HC]DDQK{I|L}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[HC][{M(Oxidation (M))|F}T]HT{I|L}{M(Oxidation (M))|F} 2.454;1.8265;1.7506;1.6137;1.6021;1.4929;1.4653;1.3707;1.3444;1.1033 -;-;-;-;-;-;-;-;-;- 314 + 1 2.092 102700.2 0.699999988079071 2497 4167 6657 SUDHL4_400M_050219_1,6666 SUDHL4_400M_050219_1,6666,KQMEDGHTLF True True KQMEDGHTLF 35.020968 603.285327136517 840153.1875 6657.0 chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;;UHRF1-KDM4B|2|fusion;;UHRF1-KDM4B|1|fusion;;nc|ENSG00000276043|Q96T88-2|UHRF1;;ENSG00000276043|ENST00000650932|UHRF1 6.9748562177022295 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6667 35.025 221.0 256750.0 25 0 22500.0 + 24018 LVYEGQLSQA 10 92 554.2881627517327 1106.5617725702652 2 554.2885619997978 MULTI CID FTMS 0 0 0 6657 157328.828125 0.5548189410559994 -1 0.096649169921875 10 Unmodified _LVYEGQLSQA_ nc|ENSG00000288701|Q5JSZ5-2|PRRC2B;nc|ENSG00000288701|Q5JSZ5-3|PRRC2B;nc|ENSG00000288701|Q5JSZ5-4|PRRC2B;nc|ENSG00000288701|Q5JSZ5-5|PRRC2B;nc|ENSG00000288701|Q5JSZ5|PRRC2B 22.736283301280096 0.4578556481593033 5 [YE]GQ{I|L}V 6 5 23.377 0.0 0.0 2.1126 0.0 0.0 0.0 414.2023358155095 414.2023358155095 -1.3594696183703547 0.0 -1.3594696183703547 0.0 0 0.0 0.0 0.0 0.2742275032520141 [YE]GQ{I|L}V 2.1126 - 238 1 2.092 49649.1 1.0 2498 4167 6657 SUDHL4_400M_050219_1,6667 SUDHL4_400M_050219_1,6667,LVYEGQLSQA False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 6668 35.028 161.0 309230.0 25 0 16458.0 + -1 GPCCQLKS 8 94 475.2158537108714 948.4171544885428 2 475.7212097048759 MULTI CID FTMS 0 0 0 6657 152118.53125 0.0532912186350106 19 -0.76904296875 11 2 Carbamidomethyl (C) _GPC(Carbamidomethyl (C))C(Carbamidomethyl (C))QLKS_ REV__ENSG00000095203|ENST00000374566|EPB41L4B 5.230669730166228 0.792582437072536 5 Y 1 -1 13.979 0.0 0.0 1.474 0.0 0.0 767.3425828106116 0.0 767.3425828106116 0.0 -11.372024224314911 -11.372024224314911 0.0 0 0.0 0.0 0.0 0.0 Y 1.474 - 123 + 1 2.092 46926.6 1.0 2499 4167 6657 SUDHL4_400M_050219_1,6668 SUDHL4_400M_050219_1,6668,GPCCQLKS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6669 35.033 232.0 333870.0 25 0 21126.0 + 13683 HQGPVPLSY 9 111 499.2589779278586 996.5034029225172 2 499.2580749392509 MULTI CID FTMS 0 0 0 6657 131833.578125 0.3170555926488532 -3 0.1862602233886718 12 Unmodified _HQGPVPLSY_ ENSG00000146083|ENST00000274811|RNF44;nc|ENSG00000146083|Q7L0R7-2|RNF44 23.78978130925829 0.2284941198415988 5 [HM]{I|L}P[H{I|L}]SY 8 4 + 34.5 0.0 0.0 3.4621 3.4621 75.968 0.0 0.0 0.0 2.3119234829887034 2.39909385331508 2.3119234829887034 2.3119234829887034 0 0.2614393726401688 0.0 0.25 0.0 [HM]{I|L}P[H{I|L}]SY;[QA][YR]P{I|L}SY;[HM]{I|L}H[{I|L}P]SY;[{I|L}P]HMH{I|L}SY;[HQ][RP]P{I|L}SY;{[DS]|[MA]|[CV]|TT}{I|L}YH{I|L}SY;[HQ]{[NV]|[RG]}H{I|L}SY;[HM]{I|L}HY[PS]{I|L};[HM]{I|L}H[KQ]{[CT]|[{M(Oxidation (M))|F}G]};[QA][YR]Y{I|L}[PS] 3.4621;3.2301;3.0336;3.0318;2.747;2.0768;1.7978;1.4283;0.8569;0.631 -;-;-;-;-;-;-;-;-;- 190 + 1 2.092 62939.1 1.0 2500 4167 6657 SUDHL4_400M_050219_1,6669 SUDHL4_400M_050219_1,6669,HQGPVPLSY False True HQGPVPLSY 35.032655 499.258074939251 2620302.75 6657.0 ENSG00000146083|ENST00000274811|RNF44;;nc|ENSG00000146083|Q7L0R7-2|RNF44 4.04063606262207 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6670 35.04 313.0 234100.0 25 0 15066.0 11517 GIMTYANSV 9 108 478.2298117124173 0 478.2303039431572 PEAK CID FTMS 0 0 0 6657 86472.828125 0.6848820106910312 1 -0.0621833801269531 13 Unmodified _GIMTYANSV_ ENSG00000111254|ENST00000228850|AKAP3 12.531546534597751 0.2832320739326029 5 VVT{M(Oxidation (M))|F}{M(Oxidation (M))|F}T 6 8 22.396 0.0 0.0 2.3465 0.0 0.0 189.0791169777657 68.05140100650624 257.130517984272 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VVT{M(Oxidation (M))|F}{M(Oxidation (M))|F}T 2.3465 - 146 + 1 2.092 63505.2 1.0 2501 4167 6657 SUDHL4_400M_050219_1,6670 SUDHL4_400M_050219_1,6670,GIMTYANSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6672 35.044 18.0 2753100.0 25 0 219380.0 -1 0 53 874.9054764860379 1747.7964000388756 2 874.9062377810478 MULTI CID FTMS 0 0 0 6671 2432586.0 0.8576951575344314 1 -0.0501289367675781 1 5 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 43.461 0.0 0.0 2.4866 0.0 0.0 862.428594795558 0.0 862.428594795558 0.0 19.60476763313845 0.0 0.0 0 1.0 0.0 0.0 0.805462187404089 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.4866 - 227 1 2.092 42084.3 1.0 2502 4168 6671 SUDHL4_400M_050219_1,6672 SUDHL4_400M_050219_1,6672, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6673 35.046 98.0 441370.0 25 0 27490.0 + 40491 VIRDVEQQF 9 87 567.3010735807321 1132.5875942282642 2 567.3011962771416 MULTI CID FTMS 0 0 0 6671 390376.59375 0.214775086769331 2 -0.1061248779296875 2 Unmodified _VIRDVEQQF_ ENSG00000076003|ENST00000264156|MCM6 26.268140514670165 0.1969607489560049 5 [{I|L}V][RD]VEQQ{M(Oxidation (M))|F} 9 0 + 61.176 0.0 0.0 5.4014 5.4014 88.393 0.0 0.0 0.0 15.47446936771074 50.06630082558985 15.47446936771074 9.208187539523747 0 0.3494850021680094 2.0 0.0 0.4247425010840047 + + [{I|L}V][RD]VEQQ{M(Oxidation (M))|F};[{I|L}V][RD]VE[AG]Q{M(Oxidation (M))|F};[{I|L}V][RD]VEQ[AG]{M(Oxidation (M))|F};[{I|L}V][RD]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VQ{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[RV]VEQQ{M(Oxidation (M))|F};[{I|L}V][RD]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QV{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[RV]VE[AG]Q{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[RV]VEQ[AG]{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[RV]VT{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[RV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VQ{M(Oxidation (M))|F} 5.4014;4.5884;4.5884;3.5904;3.4988;3.1691;2.6857;2.6857;1.8432;1.6877 +;-;-;-;-;-;-;-;-;- + 103 1 2.092 39303.1 1.0 2503 4168 6671 SUDHL4_400M_050219_1,6673 SUDHL4_400M_050219_1,6673,VIRDVEQQF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6674 35.049 101.0 534650.0 25 0 108050.0 + 14647 IILDEAHNV 9 76 512.2773391683041 1022.5401254034084 2 512.2776367068291 MULTI CID FTMS 0 0 0 6671 426770.4375 0.5793994661091303 -2 0.1588325500488281 3 Unmodified _IILDEAHNV_ ENSG00000116830|ENST00000369466|TTF2 32.78568957990786 0.1150597335874693 5 {I|L}{I|L}{I|L}DEA 6 3 62.384 0.0 0.0 6.1008 0.0 0.0 0.0 365.1590365045532 365.1590365045532 49.19592522764098 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}{I|L}{I|L}DEA 6.1008 + + 115 + 1 2.092 44883.4 1.0 2504 4168 6671 SUDHL4_400M_050219_1,6674 SUDHL4_400M_050219_1,6674,IILDEAHNV True True IILDEAHNV 35.048619 512.277636706829 3186775.75 6671.0 ENSG00000116830|ENST00000369466|TTF2 5.303383986155192 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6675 35.062 800.0 226550.0 25 0 20039.0 -1 SQRAFCTMHFY 11 157 732.31307621608 1462.61159949896 2 732.3140746951103 MULTI CID FTMS 0 0 0 6671 190601.96875 0.0458466224425317 9 -0.5204811096191406 4 Carbamidomethyl (C),Oxidation (M) _SQRAFC(Carbamidomethyl (C))TM(Oxidation (M))HFY_ ENST00000277415.15_1_9:137989658-137989826:+|nuORF 9.38312468134398 0.8308777417566128 5 [AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 97.837 0.0 0.0 6.6892 6.6892 83.492 0.0 0.0 0.0 2.900346113625176 11.448658907276354 2.900346113625176 1.1579812115913342 0 0.8935078169319297 1.6989700043360187 1.4049471895720984 1.5356668758921828 [AG]N[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]N[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQQGGA{M(Oxidation (M))|F}Y;[AG]GG[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]GG[HN]EAQQGGA{M(Oxidation (M))|F}Y 6.6892;6.61;6.4909;6.3433;6.0689;6.0689;6.0689;5.9912;5.9912;5.9912 -;-;-;-;-;-;-;-;-;- 7495 1 2.092 129222.5 0.7900000214576721 2505 4168 6671 SUDHL4_400M_050219_1,6675 SUDHL4_400M_050219_1,6675,SQRAFCTMHFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6676 35.07 433.0 357790.0 25 0 25596.0 -1 EVSEDCIQMYF 11 135 710.7917209348368 1419.5688889364735 2 710.7921630740166 MULTI CID FTMS 0 0 0 6671 176226.71875 0.6586445849868294 -3 0.2169418334960937 5 Carbamidomethyl (C) _EVSEDC(Carbamidomethyl (C))IQMYF_ ENSG00000171811|ENST00000368586|CFAP46;ENST00000475340.1_1_10:134750974-134755988:-|nuORF;nc|ENSG00000171811|Q8IYW2-2|CFAP46;nc|ENSG00000171811|Q8IYW2-3|CFAP46 8.155526934196011 0.8366696279279818 5 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 72.387 0.0 0.0 5.0993 0.0 0.0 335.1237965314469 0.0 335.1237965314469 0.0 27.677739965467865 0.0 0.0 0 0.9604093769761876 0.0 1.075257498915995 1.1307196863200843 DEAQQNA{M(Oxidation (M))|F}Y 5.0993 - 1822 1 2.092 115054.6 1.0 2506 4168 6671 SUDHL4_400M_050219_1,6676 SUDHL4_400M_050219_1,6676,EVSEDCIQMYF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6677 35.076 303.0 260230.0 25 0 26453.0 + 20761 LLSYPASAP 9 108 459.7492212910741 917.483889648948 2 459.7492248415947 MULTI CID FTMS 0 0 0 6671 152882.328125 0.0158177297335578 14 -0.6302070617675781 6 Unmodified _LLSYPASAP_ REV__ENSG00000168875|ENST00000306087|SOX14 26.88365393820708 0.1891292719743517 5 {I|L}{I|L}SY 4 -1 47.735 0.0 0.0 5.2028 0.0 0.0 0.0 438.19159876041255 438.19159876041255 27.999715208454603 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}{I|L}SY 5.2028 + + 159 + 1 2.092 66361.2 1.0 2507 4168 6671 SUDHL4_400M_050219_1,6677 SUDHL4_400M_050219_1,6677,LLSYPASAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6678 35.082 371.0 184620.0 25 0 26019.0 + 694 AENKDEIAL 9 101 501.75916002807054 1001.5037671229412 2 501.7592346072197 MULTI CID FTMS 0 0 0 6671 103120.5546875 1.0 0 0.0 7 Unmodified _AENKDEIAL_ ENSG00000079246|ENST00000392132|XRCC5;ENST00000429133.5_1_2:216974075-216982480:+|nuORF;ENST00000476360.1_1_2:216974075-216981630:+|nuORF 21.53697664764585 0.2571576504437394 5 DE{I|L}A{I|L} 5 4 26.176 0.0 0.0 2.6136 0.0 0.0 442.2205372541032 0.0 442.2205372541032 0.0 10.69095041121134 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 + DE{I|L}A{I|L} 2.6136 + + 188 1 2.092 57438.6 1.0 2508 4168 6671 SUDHL4_400M_050219_1,6678 SUDHL4_400M_050219_1,6678,AENKDEIAL False True AENKDEIAL 35.082351 501.75923460722 524635.125 6671.0 ENST00000429133.5_1_2:216974075-216982480:+|nuORF;;ENST00000476360.1_1_2:216974075-216981630:+|nuORF;;ENSG00000079246|ENST00000392132|XRCC5 3.433186133702596 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6679 35.087 240.0 249360.0 25 0 31169.0 + -1 LIQPSNCTI 9 106 523.2693585924261 1044.524164251652 2 523.2689086794853 MULTI CID FTMS 0 0 0 6671 100975.140625 0.8293254374023403 -1 0.0621833801269531 8 Carbamidomethyl (C) _LIQPSNC(Carbamidomethyl (C))TI_ REV__ENST00000263255.10_1_22:41166277-41166475:-|nuORF 23.1484247019978 0.2366544122328345 5 {I|L}{I|L}Y[DG][HN]T{I|L} 9 -1 + 35.044 0.0 0.0 3.355 3.355 78.533 0.0 0.0 0.0 20.74680576594476 0.3386372238238664 0.3386372238238664 4.771212547196626 0 0.4247425010840047 2.0 0.6747425010840047 0.0 {I|L}{I|L}Y[DG][HN]T{I|L};{I|L}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}M[HN]T{I|L};{I|L}{I|L}[C(Carbamidomethyl (C))H][YN]{I|L}{I|L} 3.355;2.8982;1.9047 -;-;- 122 + 1 2.092 51849.6 1.0 2509 4168 6671 SUDHL4_400M_050219_1,6679 SUDHL4_400M_050219_1,6679,LIQPSNCTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6680 35.09 139.0 391980.0 25 0 27886.0 126 AALDKATVL 9 92 451.2709882468513 900.5274235605026 2 451.2712890505791 MULTI CID FTMS 0 0 0 6671 205781.125 1.0 0 0.0 9 Unmodified _AALDKATVL_ ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4 37.97399986684836 0.0865783450051559 5 AAT{I|L}ASRV{I|L} 9 5 + 31.683 0.0 0.0 3.5183 3.5183 78.432 0.0 0.0 0.0 10.457574905606757 4.392653074926052 4.392653074926052 4.392653074926052 0 0.535666875892183 1.3979400086720375 0.3807196863200844 0.0 AAT{I|L}ASRV{I|L};AAT{I|L}AS{I|L}[RV];AAT{I|L}ADKV{I|L};AAT{I|L}AS[VG]V{I|L};AAT{I|L}ATV[RV];{[MG]|[TS]}ARVRV{I|L};AAT{I|L}ASVVG{I|L};AAEV[TA]KV{I|L};AAT{I|L}[{I|L}T]G[RV];AASVVSRV{I|L} 3.5183;3.0305;2.6542;2.4957;2.3619;2.357;2.3125;2.2703;2.1467;2.1466 -;-;-;-;-;-;-;-;-;- 858 1 2.092 48454.2 1.0 2510 4168 6671 SUDHL4_400M_050219_1,6680 SUDHL4_400M_050219_1,6680,AALDKATVL True True GMAAEVPKV 35.089636 451.271289050579 2208016.75 6671.0 ENSG00000182183|ENST00000517870|SHISAL2A 3.5913769404093423 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6682 35.094 16.0 3936900.0 25 0 729730.0 + 38353 TQMPDPKTF 9 71 532.7564879003567 1063.4984228675132 2 532.7581664919853 MULTI CID FTMS 0 0 0 6681 3225319.0 0.7057865711180873 2 -0.0909996032714843 1 Unmodified _TQMPDPKTF_ ENSG00000120963|ENST00000311212|ZNF706 53.40400417844725 0.0329064971918313 5 [QT]MPDPKT{M(Oxidation (M))|F} 9 0 + 61.995 0.0 0.0 5.8294 5.8294 92.938 0.0 0.0 0.0 43.33281569033012 14.582655352276674 14.582655352276674 31.414412723804546 0 1.0 1.0457574905606752 0.4247425010840047 0.0 + + [QT]MPDPKT{M(Oxidation (M))|F};[QT]MP[TP]AAT{M(Oxidation (M))|F};[QT]MP[TP]{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F};[KP]T{M(Oxidation (M))|F}{[ET]|[MV]}M[NP];[DP][VP][TP]PM[NP] 5.8294;2.8755;2.8274;2.5494;1.6674 +;-;-;-;- + 102 + 1 2.092 52722.5 1.0 2511 4169 6681 SUDHL4_400M_050219_1,6682 SUDHL4_400M_050219_1,6682,TQMPDPKTF True True TQMPDPKTF 35.094425 532.758166491985 132785544.0 6681.0 ENSG00000120963|ENST00000311212|ZNF706 9.446655909220375 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6683 35.097 100.0 665830.0 25 0 64265.0 + 5626 DPCIYKFYEFY 11 65 744.330121338148 1486.645689743096 2 744.3318359255791 MULTI CID FTMS 0 0 0 6681 509207.96875 0.341890541347034 2 -0.0909996032714843 2 Unmodified _DPCIYKFYEFY_ REV__ENSG00000163840|ENST00000296161|DTX3L 5.731851221503515 0.8481046878870278 5 {[QG]|[NA]}GA[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y 13 -1 + 67.881 0.0 0.0 4.566 4.566 76.162 0.0 0.0 0.0 8.860566476931623 9.943508928956454 8.860566476931623 0.2422750325201264 0 0.7429928190999391 0.8239087409443188 0.0 1.174742501084005 {[QG]|[NA]}GA[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[W{M(Oxidation (M))|F}]AQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[W{M(Oxidation (M))|F}]AQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[W{M(Oxidation (M))|F}]A[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F}Y 4.566;4.5498;4.3473;4.3218;3.97;3.9558;3.9558;3.9558;3.9537;3.9395 -;-;-;-;-;-;-;-;-;- 845 1 2.092 53398.6 1.0 2512 4169 6681 SUDHL4_400M_050219_1,6683 SUDHL4_400M_050219_1,6683,DPCIYKFYEFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6684 35.1 188.0 279530.0 25 0 23667.0 + + 2944 SLDDHVVAV 9 83 477.748104347235 953.48165576127 2 477.7479736208916 MULTI CID FTMS 0 0 0 6681 144124.046875 0.8522669072938324 -1 0.0501289367675781 3 Unmodified _AVHEETVAV_ ENST00000546953.1_1_6:170070523-170070838:-|nuORF;nc|ENSG00000184465|A2RRH5|WDR27;ENST00000496752.1_1_6:170065563-170070787:-|nuORF;ENSG00000184465|ENST00000448612|WDR27;ENST00000464249.1_1_6:170068797-170070787:-|nuORF 23.1484247019978 0.2366544122328345 5 VTVVAV 6 -1 31.075 0.0 0.0 3.2591 0.0 0.0 367.1135121076188 0.0 367.1135121076188 0.0 13.199849938126889 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.0 VTVVAV 3.2591 - 246 1 2.092 46645.6 1.0 2513 4169 6681 SUDHL4_400M_050219_1,6684 SUDHL4_400M_050219_1,6684,AVHEETVAV False False SLDDHVVAV 35.100209 477.747973620892 1809589.0 6681.0 ENST00000546953.1_1_6:170070523-170070838:-|nuORF;;nc|ENSG00000184465|A2RRH5|WDR27;;ENST00000496752.1_1_6:170065563-170070787:-|nuORF;;ENSG00000184465|ENST00000448612|WDR27;;ENST00000464249.1_1_6:170068797-170070787:-|nuORF 6.8351114590962725 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6685 35.107 388.0 141430.0 25 0 35475.0 + 43536 WWWWIWWQWW 10 61 583.6053685924185 1747.7942763774554 3 583.6056396365166 MULTI CID FTMS 0 0 0 6681 109990.5 1.0 0 0.0 4 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 5 {I|L}Q 2 8 21.454 0.0 0.0 1.2275 0.0 0.0 1488.6411829710082 0.0 1488.6411829710082 0.0 -2.191512336730028 -2.191512336730028 0.0 0 0.0 0.0 0.0 0.5 {I|L}Q 1.2275 - 38 + 1 2.092 50169.3 1.0 2514 4169 6681 SUDHL4_400M_050219_1,6685 SUDHL4_400M_050219_1,6685,WWWWIWWQWW False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_1 6686 35.121 800.0 195420.0 25 0 15392.0 + 41034 VMHDSSFSV 9 172 504.7262564224419 1007.4379599116838 2 504.7256957888603 MULTI CID FTMS 0 0 0 6681 88513.2109375 0.8642229112123662 -1 0.0501289367675781 5 Unmodified _VMHDSSFSV_ ENSG00000101544|ENST00000262198|ADNP2 67.34385681178166 0.0221257235307089 5 {[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}SSDYSV 9 5 + 53.035 0.0 0.0 5.2644 5.2644 81.133 0.0 0.0 0.0 39.54062396874184 0.609980835490731 0.609980835490731 2.363467363607782 0 0.4247425010840047 0.0 1.3996498648046138 0.0 {[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}SSDYSV;[HD]MVSS{M(Oxidation (M))|F}SV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{M(Oxidation (M))|F}T]SS{M(Oxidation (M))|F}SV;[HD]S{[ET]|[MV]}S{M(Oxidation (M))|F}SV;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}YSV;[MT][RH]DYSV;{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}SSD[VS]Y;[MT][RD]HYSV;{[HG]|PP}[C(Carbamidomethyl (C))Q]SS{M(Oxidation (M))|F}SV;[HD]SS{[ET]|[MV]}{M(Oxidation (M))|F}SV 5.2644;5.0298;4.385;3.9199;3.3971;3.262;3.1913;3.1658;3.1374;3.0506 -;-;-;-;-;-;-;-;-;- 765 + 1 2.092 121348.8 0.4699999988079071 2515 4169 6681 SUDHL4_400M_050219_1,6686 SUDHL4_400M_050219_1,6686,VMHDSSFSV True True VMHDSSFSV 35.120986 504.72569578886 498393.21875 6681.0 ENSG00000101544|ENST00000262198|ADNP2 6.99129597345988 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6687 35.126 273.0 335870.0 25 0 54382.0 + 20235 LLDEPTNHL 9 112 526.274086396471 1050.533619859742 2 526.2754394412041 MULTI CID FTMS 0 0 0 6681 94468.53125 0.0907769831078147 -3 0.2089614868164062 6 Unmodified _LLDEPTNHL_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 74.92900055777586 0.0191935851694334 5 {I|L}{I|L}DE[TP]NH{I|L} 9 0 + 83.955 0.0 0.0 7.9916 7.9916 96.595 0.0 0.0 0.0 60.07515625508538 10.457574905606748 10.457574905606748 16.46082806091883 0 0.8807196863200843 2.0 1.066901560044258 1.0356668758921828 + + {I|L}{I|L}DE[TP]NH{I|L};{I|L}{I|L}D[TP]ENH{I|L};{I|L}{I|L}DE[TP]GGH{I|L};{I|L}{I|L}[TP]DENH{I|L};{I|L}{I|L}D[TP]EGGH{I|L};{I|L}{I|L}[TP]DEGGH{I|L};{I|L}{I|L}D{M(Oxidation (M))|F}[{I|L}T]{[C(Carbamidomethyl (C))G]|[NC]}{I|L} 7.9916;6.4247;6.1293;6.0624;4.8531;4.4908;4.3758 +;-;-;-;-;-;- + 578 + 1 2.092 73317.8 1.0 2516 4169 6681 SUDHL4_400M_050219_1,6687 SUDHL4_400M_050219_1,6687,LLDEPTNHL True True LLDEPTNHL 35.126035 526.275439441204 14571137.0 6681.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2 5.232263406117757 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6688 35.132 324.0 258650.0 25 0 12386.0 -1 MVVESAQAV 9 127 475.23540080938034 948.4562486855608 2 475.2357360720634 MULTI CID FTMS 0 0 0 6681 111451.2109375 0.7738195523355855 -1 0.0501289367675781 7 Oxidation (M) _M(Oxidation (M))VVESAQAV_ ENST00000435550.5_1_19:9730249-9731897:-|nuORF;ENST00000444802.5_1_19:9730249-9731897:-|nuORF;ENST00000457965.5_1_19:9730249-9731897:-|nuORF 16.942295170755138 0.3780752226737986 5 Y 1 -1 13.979 0.0 0.0 1.4739 0.0 0.0 767.3821347713014 0.0 767.3821347713014 0.0 -10.260266353185408 -10.260266353185408 0.0 0 0.0 0.0 0.0 0.0 Y 1.4739 - 279 + 1 2.092 68828.8 1.0 2517 4169 6681 SUDHL4_400M_050219_1,6688 SUDHL4_400M_050219_1,6688,MVVESAQAV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6689 35.146 800.0 141360.0 25 0 8668.6 -1 FYRNHKTFMVL 11 144 736.3822509646416 0 736.3822509646416 PEAK CID FTMS 0 0 0 -1 0 8 Oxidation (M) _FYRNHKTFM(Oxidation (M))VL_ ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-2|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A 11.494710602746466 0.4364593389169961 5 VNTSQSP{M(Oxidation (M))|F} 8 -1 52.912 0.0 0.0 3.5976 0.0 0.0 131.0866879007488 476.2230318658813 607.3097197666301 0.0 0.0 0.0 0.0 0 0.0 0.0 2.079689690656103 0.0 VNTSQSP{M(Oxidation (M))|F} 3.5976 - 445 + 1 2.092 84486.2 0.6200000047683716 2518 4169 6681 SUDHL4_400M_050219_1,6689 SUDHL4_400M_050219_1,6689,FYRNHKTFMVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6691 35.156 383.0 288520.0 25 0 16439.0 + 1977 ANGQYWVHYPD 11 115 675.2972824826767 1348.5800120321533 2 675.2971069216728 MULTI CID FTMS 0 0 0 6690 157583.40625 0.5939407937727645 1 -0.035003662109375 1 Unmodified _ANGQYWVHYPD_ REV__ENSG00000101000|ENST00000216968|PROCR 8.745405648335112 0.8338865417133445 5 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS} 14 -1 + 57.79 0.0 0.0 4.2853 4.2853 80.605 0.0 0.0 0.0 4.771212547196619 0.9275405323689938 0.9275405323689938 4.771212547196619 0 0.5 1.0457574905606752 0.3252574989159953 1.5189301784845295 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS};[AG]NA{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS};{[QN]|[E{I|L}]|[KN]}A{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS};{[QG]|[NA]}{[ET]|[MV]}{[WN]|[YH]}QQNA{[CA]|SS};[AG]GQ{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS};[AG]GGA{[DS]|[MA]|[CV]|TT}{[CP]|[EA]}QQNA{[CA]|SS};[AG]{[WT]|[RM]}{[WN]|[YH]}QQNA{[CA]|SS};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[CP]|[EA]}QQNA{[CA]|SS};[AG][HT][WY]QQNA{[CA]|SS} 4.2853;3.9315;3.9305;3.7749;3.5852;3.5529;3.4128;3.2314;3.1126;3.0251 -;-;-;-;-;-;-;-;-;- 1228 1 2.093 89987.4 1.0 2519 4170 6690 SUDHL4_400M_050219_1,6691 SUDHL4_400M_050219_1,6691,ANGQYWVHYPD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6692 35.158 40.0 1387000.0 25 0 489390.0 41806 VPVSLQEPV 9 70 484.2765573463242 966.5385617594484 2 484.2767211794853 MULTI CID FTMS 0 0 0 6690 1632734.875 0.3471977411257753 -2 0.1061248779296875 2 Unmodified _VPVSLQEPV_ ENST00000569150.1_1_16:25251139-25264321:-|nuORF 21.74664581756881 0.2544899275067181 5 [VP]VS{I|L}{I|L}E[NP] 9 2 [VP]VS + + 23.232 11.726 3.0679 2.4036 2.4036 53.273 0.0 0.0 0.0 0.0 8.495302317543647 0.0 0.0 0 0.0 0.0 1.305462187404089 0.0 [VP]VS{I|L}{I|L}E[NP] 2.4036 - 206 + 1 2.093 51021.6 1.0 2520 4170 6690 SUDHL4_400M_050219_1,6692 SUDHL4_400M_050219_1,6692,VPVSLQEPV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6693 35.162 243.0 313430.0 25 0 50763.0 + + 18650 ALGDIREV 8 82 436.7451345472298 871.4757161612597 2 436.7453796267509 MULTI CID FTMS 0 0 0 6690 231364.40625 0.8354162524562069 -1 0.0559959411621093 3 Unmodified _LAGRGRGW_ ENST00000507114.1_1_17:48777854-48785015:-|nuORF;ENSG00000154945|ENST00000285243|ANKRD40 13.50788311687929 0.7113601687236069 5 [{I|L}A]GD 4 -1 40.445 0.0 0.0 4.641 0.0 0.0 0.0 512.2845894258178 512.2845894258178 30.16772595447483 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]GD 4.641 - 53 + 1 2.093 63973.5 1.0 2521 4170 6690 SUDHL4_400M_050219_1,6693 SUDHL4_400M_050219_1,6693,LAGRGRGW False False ALGDIREV 35.162112 436.745379626751 1087629.375 6690.0 ENST00000507114.1_1_17:48777854-48785015:-|nuORF;;ENSG00000154945|ENST00000285243|ANKRD40 3.490341186523437 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6694 35.168 297.0 291130.0 25 0 29248.0 42240 VSLLWPISP 9 96 506.2954853892952 1010.5764178453904 2 506.2952148318291 MULTI CID FTMS 0 0 0 6690 122414.3203125 0.1357106661274166 -3 0.1683082580566406 4 Unmodified _VSLLWPISP_ ENST00000542452.1_1_11:73727738-73744892:-|nuORF 32.30548876998284 0.1201446275138228 5 [VS]{I|L}{I|L}W{I|L}NN 8 3 49.479 0.0 0.0 4.8961 0.0 0.0 0.0 68.05142389468983 68.05142389468983 34.87510972025312 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.3807196863200844 [VS]{I|L}{I|L}W{I|L}NN 4.8961 - 155 + 1 2.093 73533.2 1.0 2522 4170 6690 SUDHL4_400M_050219_1,6694 SUDHL4_400M_050219_1,6694,VSLLWPISP True False SVIPPRTEL 35.167546 506.295214831829 8362490.5 6690.0 ENST00000489982.1_1_10:98363615-98369622:-|nuORF;;nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1;;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;;ENSG00000155629|ENST00000339364|PIK3AP1 4.479142189025879 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6695 35.172 209.0 372580.0 25 0 29095.0 + -1 ADCRSQRL 8 105 503.2499423519125 1004.4853317706252 2 503.2481567263603 MULTI CID FTMS 0 0 0 6690 96611.9765625 0.0792712109073838 -2 0.1061248779296875 5 Carbamidomethyl (C) _ADC(Carbamidomethyl (C))RSQRL_ REV__ENST00000397682.7_1_21:47737957-47742843:-|nuORF;REV__ENST00000445935.5_2_21:47737957-47742843:-|nuORF 11.640296217721598 0.738950129755968 5 [DV][C(Carbamidomethyl (C))K]S 5 -1 23.697 0.0 0.0 2.3591 0.0 0.0 0.0 412.2253512018188 412.2253512018188 4.7564996996458575 0.0 0.0 0.0 0 0.0 2.0 0.2614393726401688 0.0 [DV][C(Carbamidomethyl (C))K]S 2.3591 - 55 + 1 2.093 61952.9 1.0 2523 4170 6690 SUDHL4_400M_050219_1,6695 SUDHL4_400M_050219_1,6695,ADCRSQRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6696 35.176 231.0 241860.0 25 0 31491.0 + 27305 PHNFVKSY 8 86 496.255356493577 0 496.2559081912041 PEAK CID FTMS 0 0 0 6690 89765.0859375 0.3521799148105692 -3 0.1683082580566406 6 Unmodified _PHNFVKSY_ REV__ENSG00000188629|ENST00000683217|ZNF177 13.50788311687929 0.5021269579892848 5 {I|L} 1 -1 5.4846 0.0 0.0 0.55372 0.0 0.0 792.32251305864 82.06695734195546 874.3894704005954 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.55372 - 23 + 1 2.093 47624.2 1.0 2524 4170 6690 SUDHL4_400M_050219_1,6696 SUDHL4_400M_050219_1,6696,PHNFVKSY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6697 35.181 271.0 200970.0 25 0 28091.0 27003 PEKWESVKL 9 78 558.3085001953657 1114.6024474575313 2 558.3091918826103 MULTI CID FTMS 0 0 0 6690 218619.09375 0.1536892614438323 7 -0.4143562316894531 7 Unmodified _PEKWESVKL_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 14.40537977576856 0.4467465336100671 5 [EP]KWESV[K{I|L}] 9 0 + 29.319 0.0 0.0 2.6305 2.6305 83.747 0.0 0.0 0.0 5.642492736872601 17.329562535018045 5.642492736872601 15.969100130080562 0 0.0 0.0 0.4247425010840047 0.0 + + [EP]KWESV[K{I|L}];[K{I|L}]PEE[Q{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[K{I|L}]PEE[WK][VS] 2.6305;1.1978;0.70962 +;-;- + 78 1 2.093 47292.8 1.0 2525 4170 6690 SUDHL4_400M_050219_1,6697 SUDHL4_400M_050219_1,6697,PEKWESVKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6699 35.188 270.0 191810.0 25 0 10419.0 -1 TQMPDPKTF 9 103 540.7549114599173 1079.4952699866344 2 540.7549926638603 MULTI CID FTMS 0 0 0 6698 112176.75 0.7141628483145833 1 -0.0836524963378906 1 Oxidation (M) _TQM(Oxidation (M))PDPKTF_ ENSG00000120963|ENST00000311212|ZNF706 38.17557092003332 0.0854718145212029 5 [QT]{M(Oxidation (M))|F} 3 -1 31.756 0.0 0.0 2.9418 0.0 0.0 0.0 700.3311519048563 700.3311519048563 18.65717664709185 0.0 0.0 0.0 0 1.0 0.0 0.5189301784845296 0.6109243748081782 [QT]{M(Oxidation (M))|F} 2.9418 + + 157 1 2.093 45301.5 1.0 2526 4171 6698 SUDHL4_400M_050219_1,6699 SUDHL4_400M_050219_1,6699,TQMPDPKTF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6700 35.192 204.0 334700.0 25 0 38392.0 + + 19795 KLVSEVIGA 9 98 458.278595734771 914.542638536342 2 458.2788574099541 MULTI CID FTMS 0 0 0 6698 206545.625 0.736274625023463 -1 0.035003662109375 2 Unmodified _LGSLSVVLGA_ ENSG00000198836|ENST00000361510|OPA1;nc|ENSG00000198836|O60313-11|OPA1 28.486842064014134 0.328649637529545 5 [{I|L}V]K{[ES]|[DT]|[{I|L}C]}V{I|L}Q 8 -1 [{I|L}V]K{[ES]|[DT]|[{I|L}C]}V + + 27.432 3.9305 0.59973 2.9995 2.9995 54.171 0.0 0.0 0.0 0.0 11.74021995565861 0.0 0.0 0 0.5 0.0 0.0 0.1462566630072955 [{I|L}V]K{[ES]|[DT]|[{I|L}C]}V{I|L}Q 2.9995 - 217 + 1 2.093 56756.9 1.0 2527 4171 6698 SUDHL4_400M_050219_1,6700 SUDHL4_400M_050219_1,6700,LGSLSVVLGA False False KLVSEVIGA 35.192056 458.278857409954 1321202.0 6698.0 ENSG00000198836|ENST00000361510|OPA1;;nc|ENSG00000198836|O60313-11|OPA1 0.1244128004958232 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6701 35.195 145.0 305020.0 25 0 30923.0 + 1290 AIQPGSINY 9 87 481.7514780091098 961.4884030850196 2 481.7507507205009 MULTI CID FTMS 0 0 0 6698 248804.890625 0.880367578526999 1 -0.0836524963378906 3 Unmodified _AIQPGSINY_ ENSG00000136167|ENST00000323076|LCP1;nc|ENSG00000136167|P13796-2|LCP1 21.74664581756881 0.2544899275067181 5 [{I|L}A]Q 3 6 26.427 0.0 0.0 2.7485 0.0 0.0 0.0 646.2854361262883 646.2854361262883 8.723637474483468 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + [{I|L}A]Q 2.7485 + + 65 1 2.093 39827.4 1.0 2528 4171 6698 SUDHL4_400M_050219_1,6701 SUDHL4_400M_050219_1,6701,AIQPGSINY False True AIQPGSINY 35.194958 481.750750720501 1129769.125 6698.0 ENSG00000136167|ENST00000323076|LCP1;;nc|ENSG00000136167|P13796-2|LCP1 4.691757361094157 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6702 35.205 558.0 220790.0 25 0 15507.0 + 31068 RLISKFDTV 9 152 539.815598601316 1077.6166442694318 2 539.8173095583916 MULTI CID FTMS 0 0 0 6698 107043.1484375 1.0 0 0.0 4 Unmodified _RLISKFDTV_ ENSG00000151247|ENST00000450253|EIF4E;ENST00000507665.5_1_4:99808220-99850263:-|nuORF;ENST00000528228.1_1_8:14166702-14167074:+|nuORF;nc|ENSG00000151247|P06730-2|EIF4E;nc|ENSG00000151247|P06730-3|EIF4E 55.50274090549119 0.0285720310785888 5 [R{I|L}]{I|L}SK{M(Oxidation (M))|F}DTV 9 0 + 59.523 0.0 0.0 5.5235 5.5235 86.8 0.0 0.0 0.0 1.940679289401373 40.935498509306456 1.940679289401373 8.0215152678741 0 0.841129063296272 0.0 0.9247425010840048 0.6694451763165201 + + [R{I|L}]{I|L}SK{M(Oxidation (M))|F}DTV;{[TV]|[{I|L}S]}[R{I|L}]K{M(Oxidation (M))|F}DTV;[{I|L}T][RV]K{M(Oxidation (M))|F}DTV;V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}K[RV]PV;[R{I|L}]{I|L}SKT{[{M(Oxidation (M))|F}D]|MM}V;{[TV]|[{I|L}S]}[R{I|L}]KT{[{M(Oxidation (M))|F}D]|MM}V;[{I|L}T][RV]KT{[{M(Oxidation (M))|F}D]|MM}V;{[TV]|[{I|L}S]}[YV]WRRV 5.5235;4.7792;4.1013;2.5288;2.4034;1.6591;0.98119;0.34311 +;-;-;-;-;-;-;- + 604 1 2.093 95889.8 1.0 2529 4171 6698 SUDHL4_400M_050219_1,6702 SUDHL4_400M_050219_1,6702,RLISKFDTV True True RLISKFDTV 35.204748 539.817309558392 720065.5 6698.0 ENSG00000151247|ENST00000450253|EIF4E;;nc|ENSG00000151247|P06730-2|EIF4E;;ENST00000507665.5_1_4:99808220-99850263:-|nuORF;;ENST00000528228.1_1_8:14166702-14167074:+|nuORF;;nc|ENSG00000151247|P06730-3|EIF4E 4.306739807128906 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6703 35.219 800.0 222510.0 25 0 7535.2 + 29828 QQIGKVVQVY 10 191 581.3347662690476 1160.654979604895 2 581.3335449099541 MULTI CID FTMS 0 0 0 6698 103282.71875 0.1817988845573147 -2 0.0909996032714843 5 Unmodified _QQLGKVVQVY_ ENSG00000161970|ENST00000648839|RPL26;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;ENSG00000037241|ENST00000265100|RPL26L1 58.6788170122104 0.0400518768368984 5 {[QV]|[N{I|L}]|[RA]|[KV]}V[KG]{I|L}QQVY 10 4 + 33.997 0.0 0.0 2.9291 2.9291 76.522 0.0 0.0 0.0 3.5470236682557257 3.863390808540729 3.5470236682557257 3.5470236682557257 0 0.8182503180159344 1.0 0.0 1.778659694992122 {[QV]|[N{I|L}]|[RA]|[KV]}V[KG]{I|L}QQVY;[AG]VV[KG]{I|L}QQVY;[TP]K[KG]{I|L}QQVY;{[QV]|[N{I|L}]|[RA]|[KV]}V[KG]{I|L}[AG]QVY;{[QV]|[N{I|L}]|[RA]|[KV]}V[KG]{I|L}Q[AG]VY;[TP]VV[RN][{I|L}T]VY;{[QV]|[N{I|L}]|[RA]|[KV]}V[KG]AAVQVY;[AG]VV[KG]{I|L}Q[AG]VY;[AG]VV[KG]{I|L}[AG]QVY;VVQ[KG]{I|L}QQVY 2.9291;2.6235;2.2532;2.1395;2.1395;1.9842;1.923;1.837;1.837;1.7225 -;-;-;-;-;-;-;-;-;- 4247 1 2.093 131173.5 0.5799999833106995 2530 4171 6698 SUDHL4_400M_050219_1,6703 SUDHL4_400M_050219_1,6703,QQLGKVVQVY True True QQIGKVVQVY 35.218581 581.333544909954 3290851.75 6698.0 ENSG00000161970|ENST00000648839|RPL26;;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;;ENSG00000037241|ENST00000265100|RPL26L1 6.715729395548503 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6704 35.232 800.0 128530.0 25 0 5249.8 -1 0 81 910.9155462434372 1819.8165395536744 2 910.9146606326104 MULTI CID FTMS 0 0 0 6698 95305.125 0.5691250229300487 -4 0.2033119201660156 6 5 [VP]QN[HM]REEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 41.18 0.0 0.0 2.2629 2.2629 77.913 0.0 0.0 0.0 6.197887582883929 9.665762445130492 6.197887582883929 6.197887582883929 0 0.5 0.6989700043360187 0.3807196863200844 0.4247425010840047 [VP]QN[HM]REEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[HM]REEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[VP]QN[HM]REEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N[HM]REEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.2629;1.9223;1.3801;1.0395 -;-;-;- 443 1 2.093 71388.6 0.5699999928474426 2531 4171 6698 SUDHL4_400M_050219_1,6704 SUDHL4_400M_050219_1,6704, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6705 35.246 800.0 170120.0 25 0 15341.0 + 29363 RVIELVQKY 9 130 574.3441517657227 1146.6737505982453 2 574.3441650271416 MULTI CID FTMS 0 0 0 6698 93391.203125 0.7237070717802908 -1 0.035003662109375 7 Unmodified _QKITKPAAKY_ nc|ENSG00000118513|P10242-10|MYB;ENSG00000185697|ENST00000522677|MYBL1;nc|ENSG00000118513|P10242-3|MYB;nc|ENSG00000118513|P10242-9|MYB;nc|ENSG00000185697|P10243-2|MYBL1;nc|ENSG00000118513|P10242-12|MYB;nc|ENSG00000118513|P10242|MYB;nc|ENSG00000118513|P10242-6|MYB;ENSG00000118513|ENST00000341911|MYB;nc|ENSG00000118513|P10242-8|MYB;nc|ENSG00000118513|P10242-5|MYB;nc|ENSG00000118513|P10242-7|MYB;nc|ENSG00000118513|P10242-11|MYB;nc|ENSG00000118513|P10242-2|MYB 10.898955630103616 0.6646681216928481 5 [KQ][Q{I|L}]{I|L}VQKY 9 5 + 41.577 0.0 0.0 3.6259 3.6259 78.379 0.0 0.0 0.0 0.7378621416091846 30.60788741577753 0.7378621416091846 4.030899869919431 0 0.8494850021680094 0.0 0.0 0.5 [KQ][Q{I|L}]{I|L}VQKY;{[QN]|[E{I|L}]|[KN]}[RV]{I|L}VQKY;[KQ][Q{I|L}]{I|L}V[AG]KY;{[QN]|[E{I|L}]|[KN]}[RV]{I|L}V[AG]KY;[KQ][Q{I|L}]{I|L}[KA]RY;[KQ][Q{I|L}]RRRY;{[QN]|[E{I|L}]|[KN]}[RV]{I|L}[KA]RY;{[QN]|[E{I|L}]|[KN]}[RV]RRRY 3.6259;3.2743;2.8228;2.4713;1.5546;1.4058;1.2031;1.0542 -;-;-;-;-;-;-;- 217 1 2.093 106080.0 0.5600000023841858 2532 4171 6698 SUDHL4_400M_050219_1,6705 SUDHL4_400M_050219_1,6705,QKITKPAAKY False False RVIELVQKY 35.24626 574.344165027142 860370.8125 6698.0 nc|ENSG00000118513|P10242-10|MYB;;ENSG00000185697|ENST00000522677|MYBL1;;nc|ENSG00000118513|P10242-3|MYB;;nc|ENSG00000118513|P10242-9|MYB;;nc|ENSG00000185697|P10243-2|MYBL1;;nc|ENSG00000118513|P10242-12|MYB;;nc|ENSG00000118513|P10242|MYB;;nc|ENSG00000118513|P10242-6|MYB;;ENSG00000118513|ENST00000341911|MYB;;nc|ENSG00000118513|P10242-8|MYB;;nc|ENSG00000118513|P10242-5|MYB;;nc|ENSG00000118513|P10242-7|MYB;;nc|ENSG00000118513|P10242-11|MYB;;nc|ENSG00000118513|P10242-2|MYB 4.128921111424764 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6706 35.25 169.0 266680.0 25 0 32819.0 30493 REEVEAVTI 9 89 523.2802308411502 1044.5459087491004 2 523.2809326052666 MULTI CID FTMS 0 0 0 6698 233880.453125 1.0 0 0.0 8 Unmodified _REEVEAVTI_ ENSG00000140986|ENST00000268661|RPL3L 36.12702656103203 0.0967173616627612 5 {NN|[MP]|[D{I|L}]|[EV]}WV{I|L}WT{I|L} 8 5 + 53.082 0.0 0.0 5.0818 5.0818 88.103 0.0 0.0 0.0 17.10531903759587 9.731975075880328 9.731975075880328 9.262137858390815 0 1.1989700043360187 1.0457574905606752 0.6747425010840047 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}WV{I|L}WT{I|L};{NN|[MP]|[D{I|L}]|[EV]}WV{I|L}{[DA]|[EG]}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}WVT[TP]T{I|L};{[SA]|[TG]}QQV{I|L}WT{I|L};{[SA]|[TG]}QQV{I|L}{[DA]|[EG]}T{I|L};{[SA]|[TG]}QQVT[TP]T{I|L} 5.0818;4.1951;4.0265;3.4443;2.5627;2.3941 -;-;-;-;-;- 107 1 2.093 42205.5 1.0 2533 4171 6698 SUDHL4_400M_050219_1,6706 SUDHL4_400M_050219_1,6706,REEVEAVTI True False GEIDGNKVTL 35.249579 523.280932605267 1187419.625 6698.0 ENST00000461347.5_1_2:232319904-232323320:-|nuORF;;ENSG00000115053|ENST00000322723|NCL 2.9696969588597617 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6707 35.265 800.0 233330.0 25 0 5967.1 + + -1 IAVSTGASL 9 137 817.8822092052927 1633.7498654773854 2 818.3835327029228 MULTI CID FTMS 0 0 0 6698 95778.46875 1.0 0 0.0 9 Carbamidomethyl (C) _YRC(Carbamidomethyl (C))RELYNWFQ_ nc|ENSG00000123473|Q15468|STIL;ENSG00000123473|ENST00000371877|STIL 1.3295316138638542 0.8688751186870782 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}DADQTVSTS{I|L}Q 15 -1 + 81.465 0.0 0.0 4.9864 4.9864 80.421 0.0 0.0 0.0 5.2320020683564366 12.525749891599531 5.2320020683564366 2.5649873629158293 0 0.0 0.0 1.999134866972624 0.3494850021680094 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}DADQTVSTS{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}DAD{[SA]|[TG]}AVSTS{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}DWQTVSTS{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}DW{[SA]|[TG]}AVSTS{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}WDQTVSTS{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}DAD[AG]TVSTS{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}WD{[SA]|[TG]}AVSTS{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP]DADQTVSTS{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{I|L}DW[AG]TVSTS{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[EP]DAD{[SA]|[TG]}AVSTS{I|L}Q 4.9864;4.8294;4.7612;4.603;4.5769;4.4336;4.4187;4.315;4.2072;4.158 -;-;-;-;-;-;-;-;-;- 53141 + 1 2.093 127628.2 0.5799999833106995 2534 4171 6698 SUDHL4_400M_050219_1,6707 SUDHL4_400M_050219_1,6707,YRCRELYNWFQ False False IAVSTGASL 35.264599 818.383532702923 1195964.125 6698.0 nc|ENSG00000123473|Q15468|STIL;;ENSG00000123473|ENST00000371877|STIL 5.456514358520508 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6709 35.271 217.0 289770.0 25 0 70617.0 + 20712 LLSAEPVPA 9 90 448.7581444757428 895.5017360182856 2 448.7579528689384 MULTI CID FTMS 0 0 0 6708 242059.421875 0.0075147492557257 27 -0.9244728088378906 1 Unmodified _LLSAEPVPA_ ENSG00000007312|ENST00000006750|CD79B;ENST00000558969.1_1_17:62008689-62009627:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B 23.1484247019978 0.2366544122328345 5 [VP]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P 6 8 18.094 0.0 0.0 2.0205 0.0 0.0 0.0 282.1458759931481 282.1458759931481 6.691854273472391 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5629529932484498 0.0 [VP]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P 2.0205 - 148 1 2.093 53325.9 1.0 2535 4172 6708 SUDHL4_400M_050219_1,6709 SUDHL4_400M_050219_1,6709,LLSAEPVPA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6710 35.285 800.0 108450.0 25 0 27723.0 -1 0 43 1197.1576284122457 3588.451055836937 3 1197.826708972454 MULTI CID FTMS 0 0 0 6708 190762.1875 0.4286671522336879 2 -0.1534957885742187 2 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.19478 0.0 0.0 2203.768352245961 1234.5971504240065 3438.365502669967 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.19478 - 17 + 1 2.093 78790.5 0.8500000238418579 2536 4172 6708 SUDHL4_400M_050219_1,6710 SUDHL4_400M_050219_1,6710, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6711 35.287 101.0 873720.0 25 0 102370.0 + 20580 LLNVEPAGA 9 99 442.2477748072325 882.480996681265 2 442.2478210330009 MULTI CID FTMS 0 0 0 6708 726354.5625 0.2546341119049157 -3 0.174652099609375 3 Unmodified _LLNVEPAGA_ ENST00000534096.5_1_19:50838046-50848012:-|nuORF;ENST00000534789.5_1_19:50838228-50848012:-|nuORF 60.38955033654506 0.025866396858536 5 {I|L}{I|L}NVE 5 4 41.649 0.0 0.0 4.7195 0.0 0.0 0.0 311.1354956431907 311.1354956431907 16.700527527228324 0.0 0.0 0.0 0 0.7396518287104438 1.6989700043360187 0.3807196863200844 0.4247425010840047 + {I|L}{I|L}NVE 4.7195 + + 343 1 2.093 76602.8 1.0 2537 4172 6708 SUDHL4_400M_050219_1,6711 SUDHL4_400M_050219_1,6711,LLNVEPAGA True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6712 35.292 282.0 464670.0 25 0 42292.0 + 22706 LQFPVGRIHR 10 114 408.2436168632602 1221.7090211899806 3 408.2436401247978 MULTI CID FTMS 0 0 0 6708 226299.15625 0.8514275891738396 -3 0.174652099609375 4 Unmodified _LQFPVGRIHR_ ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENSG00000164508|ENST00000297012|H2AC1;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-2|H2AZ2;nc|ENSG00000105968|Q71UI9-5|H2AZ2 29.43715596616401 0.3072975788498757 5 {I|L}Q{M(Oxidation (M))|F}P[RV]{[VA]|[{I|L}G]}HR 10 2 + 64.307 0.0 0.0 5.2637 5.2637 91.957 0.0 0.0 0.0 45.11144356039232 15.026975159433531 15.026975159433531 64.3073687880333 0 0.5 0.638272163982407 0.0 1.6549471895720984 {I|L}Q{M(Oxidation (M))|F}P[RV]{[VA]|[{I|L}G]}HR 5.2637 - 104 + 1 2.093 107486.8 1.0 2538 4172 6708 SUDHL4_400M_050219_1,6712 SUDHL4_400M_050219_1,6712,LQFPVGRIHR False True LQFPVGRIHR 35.292168 408.243640124798 1992984.625 6708.0 nc|ENSG00000105968|Q71UI9-5|H2AZ2;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000105968|ENST00000308153|H2AZ2;;ENSG00000164032|ENST00000296417|H2AZ1;;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;;nc|ENSG00000105968|Q71UI9-2|H2AZ2 6.333575248718262 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6713 35.295 168.0 349260.0 25 0 28515.0 + 12077 GQFPGHNEF 9 101 516.7305607301898 1031.4465685271796 2 516.7308227419853 MULTI CID FTMS 0 0 0 6708 212863.375 0.2489996881850652 32 -1.2844467163085938 5 Unmodified _GQFPGHNEF_ ENSG00000163171|ENST00000295324|CDC42EP3 32.78568957990786 0.1150597335874693 5 {[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}SNW 8 5 + 37.935 0.0 0.0 3.6779 3.6779 78.225 0.0 0.0 0.0 25.17103025987173 0.8612743854491356 0.8612743854491356 3.807196863200844 0 0.9247425010840048 0.0 0.75 0.3807196863200844 {[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}SNW;{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}SHY;{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}SGGW;{[QG]|[NA]}[YG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QW;{[WT]|[RM]}EEGPQW;[VG]M[WE]PQW;{[QG]|[NA]}{M(Oxidation (M))|F}[YG]{M(Oxidation (M))|F}QW;[AG]G[YG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}QW;{[WT]|[RM]}[WE]PQW;{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[YG]QW 3.6779;3.3088;2.4108;2.3633;2.0424;1.9736;1.9515;1.9428;1.8835;1.8322 -;-;-;-;-;-;-;-;-;- 362 + 1 2.093 52750.3 1.0 2539 4172 6708 SUDHL4_400M_050219_1,6713 SUDHL4_400M_050219_1,6713,GQFPGHNEF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6714 35.302 350.0 239850.0 25 0 23842.0 21252 LPDSLIAP 8 131 413.2389218098328 0 413.2388183474541 PEAK CID FTMS 0 0 0 6708 181731.96875 0.7401997961321105 -1 0.0836524963378906 6 Unmodified _LPDSLIAP_ ENSG00000175727|ENST00000319080|MLXIP;nc|ENSG00000175727|Q9HAP2-3|MLXIP 8.593279151180031 0.5573742999696857 5 P 1 7 6.9897 0.0 0.0 0.84779 0.0 0.0 113.07081697586018 611.3116549127561 724.3824718886164 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.84779 + + 1 + 1 2.093 68791.2 1.0 2540 4172 6708 SUDHL4_400M_050219_1,6714 SUDHL4_400M_050219_1,6714,LPDSLIAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6715 35.309 398.0 237490.0 25 0 24222.0 + 19928 LIAYMCHA 8 123 461.2213648514921 920.4281767697844 2 461.2216979861259 MULTI CID FTMS 0 0 0 6708 152286.390625 0.6092552665264289 -3 0.174652099609375 7 Unmodified _LIAYMCHA_ REV__ENSG00000112541|ENST00000539869|PDE10A;REV__nc|ENSG00000112541|Q9Y233-1|PDE10A;REV__nc|ENSG00000112541|Q9Y233-2|PDE10A 17.086550045450526 0.6584923310065985 5 AC 2 -1 20.969 0.0 0.0 2.2782 0.0 0.0 0.0 743.342614161125 743.342614161125 6.989700043360188 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AC 2.2782 - 142 + 1 2.093 78809.7 1.0 2541 4172 6708 SUDHL4_400M_050219_1,6715 SUDHL4_400M_050219_1,6715,LIAYMCHA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6716 35.312 185.0 202510.0 25 0 13143.0 + 10100 FPTSQRLPA 9 69 508.7800175004863 1015.5454820677726 2 508.7797729372978 MULTI CID FTMS 0 0 0 6708 151501.109375 0.1367692490588155 23 -0.8422737121582031 8 Unmodified _FPTSQRLPA_ ENST00000399831.7_1_8:38965091-38975631:+|nuORF 19.256988751693697 0.3154191944385105 5 TPE 3 7 34.253 0.0 0.0 3.3728 0.0 0.0 670.377418890533 0.0 670.377418890533 0.0 21.09189699011424 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 TPE 3.3728 - 34 1 2.093 38260.0 1.0 2542 4172 6708 SUDHL4_400M_050219_1,6716 SUDHL4_400M_050219_1,6716,FPTSQRLPA False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6717 35.316 170.0 298980.0 25 0 33505.0 20067 LITDYREY 8 86 536.7687346842366 0 536.7696411013603 PEAK CID FTMS 0 0 0 6708 120677.1171875 1.0 0 0.0 9 Unmodified _LITDYREY_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 12.531546534597751 0.5131024102181418 5 EY{I|L} 3 7 18.188 0.0 0.0 1.6974 0.0 0.0 181.07480960109189 482.22501829238 663.299827893472 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 EY{I|L} 1.6974 - 93 + 1 2.093 43684.5 1.0 2543 4172 6708 SUDHL4_400M_050219_1,6717 SUDHL4_400M_050219_1,6717,LITDYREY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6718 35.325 481.0 242330.0 25 0 21362.0 7840 ELKTACRKH 9 126 543.2990476351079 1084.5835423370156 2 543.7982055544853 MULTI CID FTMS 0 0 0 6708 112964.1171875 1.0 0 0.0 10 Unmodified _ELKTACRKH_ ENSG00000153162|ENST00000283147|BMP6 8.745405648335112 0.6093864874670651 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q]Y 5 7 15.062 0.0 0.0 1.3887 0.0 0.0 0.0 396.3206388548469 396.3206388548469 2.0859740398238795 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q]Y 1.3887 - 136 1 2.093 94947.2 1.0 2544 4172 6708 SUDHL4_400M_050219_1,6718 SUDHL4_400M_050219_1,6718,ELKTACRKH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6719 35.331 302.0 445070.0 25 0 41676.0 39979 VGATAVAF 8 191 368.2047248484518 734.3948967637036 2 368.2043945193291 MULTI CID FTMS 0 0 0 6708 182091.359375 0.6103574738976314 -2 0.1186561584472656 11 Unmodified _VGATAVAF_ ENSG00000119333|ENST00000372715|DYNC2I2 2.889219685676258 0.8067950007271085 5 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F} 3 6 19.922 0.0 0.0 2.7126 0.0 0.0 0.0 382.2271587797878 382.2271587797878 7.447274948966939 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F} 2.7126 - 24 1 2.093 105073.2 1.0 2545 4172 6708 SUDHL4_400M_050219_1,6719 SUDHL4_400M_050219_1,6719,VGATAVAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6721 35.335 43.0 1036600.0 25 0 83603.0 -1 0 53 874.9054764860379 1747.7964000388756 2 874.9057494997978 MULTI CID FTMS 0 0 0 6720 1094290.25 0.3858311477424199 6 -0.2806663513183594 1 5 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 47.369 0.0 0.0 2.7102 0.0 0.0 734.3705921857437 0.0 734.3705921857437 0.0 29.78880750180595 0.0 0.0 0 1.0 0.0 0.0 0.8494850021680094 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.7102 - 218 1 2.093 37039.3 1.0 2546 4173 6720 SUDHL4_400M_050219_1,6721 SUDHL4_400M_050219_1,6721, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6722 35.349 800.0 202430.0 25 0 17940.0 -1 NWNCKMNQFY 10 132 710.7917209348368 1419.5688889364735 2 710.7920410037041 MULTI CID FTMS 0 0 0 6720 188128.984375 0.7031291152475458 2 -0.1012458801269531 2 Carbamidomethyl (C),Oxidation (M) _NWNC(Carbamidomethyl (C))KM(Oxidation (M))NQFY_ ENST00000244230.6_1_2:71360149-71360302:+|nuORF 7.289230182591677 0.6929195370588109 5 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 75.085 0.0 0.0 5.2893 0.0 0.0 335.1238308689529 0.0 335.1238308689529 0.0 39.9438680665797 0.0 0.0 0 0.8935078169319297 0.0 0.9802046884880936 1.110924374808178 DEAQQNA{M(Oxidation (M))|F}Y 5.2893 - 945 1 2.093 114899.5 0.800000011920929 2547 4173 6720 SUDHL4_400M_050219_1,6722 SUDHL4_400M_050219_1,6722,NWNCKMNQFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6723 35.352 154.0 797820.0 25 0 194480.0 + 42417 VTEKAVLP 8 103 428.7604219423855 855.5062909515709 2 428.7604553103447 MULTI CID FTMS 0 0 0 6720 447885.59375 1.0 0 0.0 3 Unmodified _VTEKAVLP_ REV__ENSG00000168803|ENST00000562188|ADAL;REV__nc|ENSG00000168803|Q6DHV7-2|ADAL;REV__nc|ENSG00000168803|Q6DHV7-3|ADAL 34.10243960390752 0.3329570729325616 5 {[VA]|[{I|L}G]}KETV[{I|L}P] 8 -1 + 36.367 0.0 0.0 4.2509 4.2509 75.154 0.0 0.0 0.0 9.999999999999991 6.98970004336018 6.98970004336018 0.2422750325201406 0 0.5 1.3010299956639813 0.7302046884880937 0.3252574989159953 {[VA]|[{I|L}G]}KETV[{I|L}P];{[VA]|[{I|L}G]}KES{I|L}[{I|L}P];{[VA]|[{I|L}G]}S{[TV]|[{I|L}S]}G{I|L}[{I|L}P];{[VA]|[{I|L}G]}S{[VA]|[{I|L}G]}S{I|L}[{I|L}P];{[VA]|[{I|L}G]}S{[TV]|[{I|L}S]}AV[{I|L}P];{[VA]|[{I|L}G]}S{[VA]|[{I|L}G]}TV[{I|L}P];[KA]VETV[{I|L}P];[KA]VES{I|L}[{I|L}P];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[TV]|[{I|L}S]}AV[{I|L}P];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[TV]|[{I|L}S]}G{I|L}[{I|L}P] 4.2509;4.2226;3.6178;3.4485;3.2659;3.0966;3.082;3.0537;2.6296;2.6013 -;-;-;-;-;-;-;-;-;- 298 1 2.093 102455.8 1.0 2548 4173 6720 SUDHL4_400M_050219_1,6723 SUDHL4_400M_050219_1,6723,VTEKAVLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6724 35.355 102.0 947830.0 25 0 198480.0 + 39223 TYYGSFVTR 9 85 547.26924479431 1092.52393665542 2 547.2688476443291 MULTI CID FTMS 0 0 0 6720 427479.09375 0.090143899632353 -3 0.1850051879882812 4 Unmodified _TYYGSFVTR_ ENSG00000147677|ENST00000521861|EIF3H;ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 51.41523569358685 0.0372669606867193 5 TYYGS{M(Oxidation (M))|F}VTR 9 0 + 99.518 0.0 0.0 9.109 9.109 97.998 0.0 0.0 0.0 85.53904087461092 20.98689918391166 20.98689918391166 22.21848749616356 0 0.4247425010840047 2.0 0.7302046884880937 0.7614393726401688 + + TYYGS{M(Oxidation (M))|F}VTR;TYY[YQ]VTR;TYYGS{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Y;TYYG[WK]{I|L}Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{M(Oxidation (M))|F}SGY[{M(Oxidation (M))|F}V];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[YQ]Y[{M(Oxidation (M))|F}V];HH[NG]{[WS]|[C(Carbamidomethyl (C)){I|L}]}VTR 9.109;7.0754;6.6645;5.4031;4.948;2.246;0.83836 +;-;-;-;-;-;- + 165 + 1 2.093 75561.6 1.0 2549 4173 6720 SUDHL4_400M_050219_1,6724 SUDHL4_400M_050219_1,6724,TYYGSFVTR True True TYYGSFVTR 35.354526 547.268847644329 77692944.0 6720.0 ENST00000517974.1_1_8:117671049-117768052:-|nuORF;;ENSG00000147677|ENST00000521861|EIF3H;;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 8.806736946105957 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6725 35.361 342.0 533090.0 25 0 65509.0 + 9722 FLYDDNQRV 9 105 585.282934337562 1168.551315741924 2 585.2825805544853 MULTI CID FTMS 0 0 0 6720 341521.28125 0.2157245885045382 -3 0.1850051879882812 5 Unmodified _FLYDDNQRV_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 62.57269311338072 0.0246576765497938 5 {M(Oxidation (M))|F}{I|L}YDDNQRV 9 0 + 74.644 0.0 0.0 6.3877 6.3877 89.097 0.0 0.0 0.0 54.648078574929045 4.37321916156192 4.37321916156192 8.248437132793924 0 0.4247425010840047 0.0 0.3807196863200844 1.5629529932484498 + + {M(Oxidation (M))|F}{I|L}YDDNQRV;{M(Oxidation (M))|F}{I|L}YDDN[RN]{I|L};{M(Oxidation (M))|F}{I|L}YDDGGQRV;{M(Oxidation (M))|F}{I|L}YDDN[AG]RV;{M(Oxidation (M))|F}{I|L}YDDGG[RN]{I|L};{M(Oxidation (M))|F}{I|L}YDDGG[AG]RV;{[YD]|[{M(Oxidation (M))|F}M]}[RP]VDY{I|L}E;{[YD]|[{M(Oxidation (M))|F}M]}[RP]DVY{I|L}E;{[YD]|[{M(Oxidation (M))|F}M]}D[RP]VY{I|L}E;{[YD]|[{M(Oxidation (M))|F}M]}[RP]DYV{I|L}E 6.3877;5.6818;5.5997;5.5997;4.8938;4.8154;4.7008;4.6571;4.6571;4.6195 +;-;-;-;-;-;-;-;-;- + 690 + 1 2.093 137707.5 1.0 2550 4173 6720 SUDHL4_400M_050219_1,6725 SUDHL4_400M_050219_1,6725,FLYDDNQRV True True FLYDDNQRV 35.360724 585.282580554485 19411850.0 6720.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;nc|ENSG00000131747|P11388-2|TOP2A;;ENSG00000077097|ENST00000264331|TOP2B 7.020417054494222 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6726 35.363 124.0 553840.0 25 0 33151.0 + 28583 PTVLPRKQG 9 102 498.30374864073326 994.5929443482664 2 498.3037292361259 MULTI CID FTMS 0 0 0 6720 275224.9375 1.0 0 0.0 6 Unmodified _PTVLPRKQG_ REV__ENSG00000178764|ENST00000314393|ZHX2 4.3292370932331545 0.7635526921153418 5 SY 2 -1 14.949 0.0 0.0 1.503 0.0 0.0 726.4868785297103 0.0 726.4868785297103 0.0 0.3342375548694996 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 1.503 - 173 + 1 2.093 56389.5 1.0 2551 4173 6720 SUDHL4_400M_050219_1,6726 SUDHL4_400M_050219_1,6726,PTVLPRKQG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6727 35.369 308.0 278220.0 25 0 13647.0 -1 MLIFYDQRQVL 11 107 721.3805289321467 1440.746504931093 2 721.3800536990166 MULTI CID FTMS 0 0 0 6720 254883.828125 0.6746193755785161 -1 0.0663490295410156 7 Oxidation (M) _M(Oxidation (M))LIFYDQRQVL_ ENSG00000007541|ENST00000321878|PIGQ;nc|ENSG00000007541|Q9BRB3-3|PIGQ;nc|ENSG00000007541|Q9BRB3|PIGQ 15.248480904072842 0.7179608125786238 5 [AG]GV[WR]PSQSANV{I|L} 14 -1 + 87.602 0.0 0.0 6.0803 6.0803 87.1 0.0 0.0 0.0 6.124276586420237 16.667853209646168 6.124276586420237 6.124276586420237 0 0.3807196863200844 1.3010299956639813 1.774227503252014 0.8494850021680094 [AG]GV[WR]PSQSANV{I|L};{[NV]|[RG]}A[WR]PSQSANV{I|L};{[QG]|[NA]}V[WR]PSQSANV{I|L};[AG]GV[WR]PSQSAGGV{I|L};[AG]GV[WR]PS[AG]SANV{I|L};{[NV]|[RG]}A[WR]PS[AG]SANV{I|L};{[NV]|[RG]}A[WR]PSQSAGGV{I|L};{[QG]|[NA]}V[WR]PS[AG]SANV{I|L};{[QG]|[NA]}V[WR]PSQSAGGV{I|L};[AG]GSV[QP][WR]SANV{I|L} 6.0803;5.6553;5.5685;5.4522;5.4522;5.0256;5.0256;4.9388;4.9388;4.8347 -;-;-;-;-;-;-;-;-;- 1668 1 2.093 64750.7 1.0 2552 4173 6720 SUDHL4_400M_050219_1,6727 SUDHL4_400M_050219_1,6727,MLIFYDQRQVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6728 35.383 800.0 209150.0 25 0 19047.0 -1 FPWPCQHHCFY 11 109 761.3154476762827 1520.6163424193653 2 761.3151122927666 MULTI CID FTMS 0 0 0 6720 126611.6171875 0.4676183625394868 -2 0.1500015258789062 8 Carbamidomethyl (C) _FPWPC(Carbamidomethyl (C))QHHCFY_ ENST00000501122.2_1_11:65211061-65211343:+|nuORF 9.38312468134398 0.8308777417566128 5 [HD][PS]DEAQQNA{M(Oxidation (M))|F}Y 13 -1 + 96.86 0.0 0.0 6.3698 6.3698 89.674 0.0 0.0 0.0 3.120253799654435 51.27222676857886 3.120253799654435 9.072459467631006 0 0.8807196863200843 0.9208187539523752 1.086696871556164 1.274227503252014 [HD][PS]DEAQQNA{M(Oxidation (M))|F}Y;[HD][PS]DEAQQGGA{M(Oxidation (M))|F}Y;[HD][PS]DEA[AG]QNA{M(Oxidation (M))|F}Y;[HD][PS]DEAQ[AG]NA{M(Oxidation (M))|F}Y;[HS][DP]DEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M]QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGAAEDHNNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGC(Carbamidomethyl (C))G[YE]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQAEDHNNA{M(Oxidation (M))|F}Y;[HS][HS]CEAQQNA{M(Oxidation (M))|F}Y 6.3698;5.7732;5.7732;5.7732;5.7122;5.6259;5.5025;5.4676;5.3771;5.2525 -;-;-;-;-;-;-;-;-;- 11761 1 2.093 119169.8 0.6600000262260437 2553 4173 6720 SUDHL4_400M_050219_1,6728 SUDHL4_400M_050219_1,6728,FPWPCQHHCFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6729 35.388 285.0 204900.0 25 0 13896.0 + -1 GLACRWEE 8 101 510.7310676617694 1019.4475823903388 2 510.7324401736259 MULTI CID FTMS 0 0 0 6720 130906.484375 0.8727748993805268 -2 0.1500015258789062 9 Carbamidomethyl (C) _GLAC(Carbamidomethyl (C))RWEE_ REV__ENSG00000011198|ENST00000644371|ABHD5 6.354104778181461 0.7857632046190106 5 {I|L} 1 -1 11.259 0.0 0.0 1.1044 0.0 0.0 888.3523960883841 0.0 888.3523960883841 0.0 1.2590598649689966 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1044 + + 106 + 1 2.093 52162.2 1.0 2554 4173 6720 SUDHL4_400M_050219_1,6729 SUDHL4_400M_050219_1,6729,GLACRWEE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6730 35.397 492.0 401330.0 25 0 40196.0 + 44407 YLYGQTTTY 9 170 555.2608970434701 1108.50724115374 2 555.2598144412041 MULTI CID FTMS 0 0 0 6720 121467.53125 0.2350614159293534 -3 0.1850051879882812 10 Unmodified _YLYGQTTTY_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 18.13498045792455 0.3457906370836843 5 [PS]TKWTGAT 9 8 43.977 0.0 0.0 3.9673 0.0 0.0 0.0 176.02070485907134 176.02070485907134 18.878520122955884 0.0 0.0 0.0 0 0.0 0.5528419686577808 1.6087743318676988 0.0 [PS]TKWTGAT 3.9673 - 4281 1 2.093 149246.2 1.0 2555 4173 6720 SUDHL4_400M_050219_1,6730 SUDHL4_400M_050219_1,6730,YLYGQTTTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6731 35.405 403.0 403300.0 25 0 25029.0 + 11279 GEVDPKVAL 9 160 464.261338777292 926.508124621384 2 464.2610656619072 MULTI CID FTMS 0 0 0 6720 117055.78125 0.2709867638590267 -2 0.1500015258789062 11 Unmodified _GEVDPKVAL_ ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF 36.506200033944 0.094635877243972 5 {[DA]|[EG]}V[KP]VDA{I|L} 9 2 + 51.929 0.0 0.0 5.6048 5.6048 83.765 0.0 0.0 0.0 3.740443741747441 5.593859345357188 3.740443741747441 3.740443741747441 0 1.305462187404089 1.6989700043360187 0.0 0.0 {[DA]|[EG]}V[KP]VDA{I|L};[DV]KVPADA{I|L};[KP]VADVDA{I|L};[{I|L}A]ASVPADA{I|L};[DV]KPVADA{I|L};[KP]VDVADA{I|L};[{I|L}A]ASPVADA{I|L};[DV]KPAVDA{I|L};[KP]VDAVDA{I|L};[KP]DVVADA{I|L} 5.6048;5.201;4.8201;4.7965;4.784;4.5998;4.3795;4.3545;4.1703;4.0848 -;-;-;-;-;-;-;-;-;- 1357 1 2.093 125588.5 1.0 2556 4173 6720 SUDHL4_400M_050219_1,6731 SUDHL4_400M_050219_1,6731,GEVDPKVAL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6732 35.416 634.0 193590.0 25 0 26802.0 + 15000 ILSDNLRQV 9 134 529.3042012236784 0 529.3046752810478 PEAK CID FTMS 0 0 0 6720 102158.234375 0.6480516504379368 -2 0.1500015258789062 12 Unmodified _ILSDNLRQV_ ENSG00000204713|ENST00000377199|TRIM27;nc|ENSG00000204713|P14373-2|TRIM27 34.40172386719151 0.0892392376003579 5 {I|L}SDVQ 5 5 33.984 0.0 0.0 3.2164 0.0 0.0 113.08348843542996 398.2170199029906 511.3005083384206 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.805462187404089 {I|L}SDVQ 3.2164 - 217 + 1 2.093 97365.9 1.0 2557 4173 6720 SUDHL4_400M_050219_1,6732 SUDHL4_400M_050219_1,6732,ILSDNLRQV True True ILSDNLRQV 35.416117 529.304675281048 19621628.0 6720.0 nc|ENSG00000204713|P14373-2|TRIM27;;ENSG00000204713|ENST00000377199|TRIM27 5.727622985839844 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6733 35.418 91.0 1117100.0 25 0 355430.0 -1 0 66 522.2925226416522 521.2852461750522 1 522.2921020388603 MULTI CID FTMS 0 0 0 6720 479699.1875 0.4343570365200762 -2 0.1500015258789062 13 5 YQV{I|L} 4 -1 + 56.043 0.0 0.0 10.751 10.751 85.788 0.0 0.0 0.0 0.0683686732313617 0.0683686732313617 0.0683686732313617 0.0683686732313617 0 1.1923877696554317 1.3979400086720375 0.0 0.3252574989159953 YQV{I|L};[YQ]V{I|L};Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}Y 10.751;10.738;5.5806;4.8052;2.4892 -;-;-;-;- 37 + 1 2.093 84566.1 1.0 2558 4173 6720 SUDHL4_400M_050219_1,6733 SUDHL4_400M_050219_1,6733, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6735 35.423 26.0 1467900.0 25 0 508670.0 + 41483 VPLSVEPNL 9 60 484.2765573463242 966.5385617594484 2 484.2766906619072 MULTI CID FTMS 0 0 0 6734 1833562.25 0.3899032728222297 2 -0.0866241455078125 1 Unmodified _VPLSVEPNL_ REV__ENSG00000140836|ENST00000268489|ZFHX3;REV__nc|ENSG00000140836|Q15911-2|ZFHX3 16.942295170755138 0.3780752226737986 5 [VP]{I|L} 3 -1 11.884 0.0 0.0 1.2296 0.0 0.0 0.0 654.309929517514 654.309929517514 -2.641368885835213 0.0 -2.641368885835213 0.0 0 0.0 1.0457574905606752 0.0 0.0 [VP]{I|L} 1.2296 + + 118 1 2.082 36116.6 1.0 2559 4174 6734 SUDHL4_400M_050219_1,6735 SUDHL4_400M_050219_1,6735,VPLSVEPNL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6736 35.424 63.0 779690.0 25 0 120760.0 + 20236 LLDEPTNHL 9 72 526.274086396471 1050.533619859742 2 526.2745849490166 MULTI CID FTMS 0 0 0 6734 557102.625 0.535332717782084 2 -0.0866241455078125 2 Unmodified _LLDEPTNHL_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 61.357469665136826 0.0253304979873734 5 {I|L}{I|L}DE[TP]NH{I|L} 9 0 + 66.647 0.0 0.0 6.3441 6.3441 92.674 0.0 0.0 0.0 54.65735931149851 11.382805414149786 11.382805414149786 13.455612550363796 0 0.9247425010840048 2.0 1.2059771852360797 0.4247425010840047 + + {I|L}{I|L}DE[TP]NH{I|L};{I|L}{I|L}DE[TP]GGH{I|L};{I|L}{I|L}D[PS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}H{I|L} 6.3441;5.0633;4.5362 +;-;- + 119 + 1 2.082 40708.3 1.0 2560 4174 6734 SUDHL4_400M_050219_1,6736 SUDHL4_400M_050219_1,6736,LLDEPTNHL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6737 35.425 39.0 1421900.0 25 0 129180.0 + 31509 RQGFVPAAY 9 62 504.76689387237167 1007.5192348115434 2 504.7667114138603 MULTI CID FTMS 0 0 0 6734 1337214.125 0.7834264894748316 -2 0.1534957885742187 3 Unmodified _RQGFVPAAY_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 21.74664581756881 0.2544899275067181 5 V[HV]AY 5 6 37.218 0.0 0.0 3.6941 0.0 0.0 420.2002692253181 0.0 420.2002692253181 0.0 19.313637641589875 0.0 0.0 0 1.5 0.0 0.0 0.0 V[HV]AY 3.6941 - 28 + 1 2.082 47742.6 1.0 2561 4174 6734 SUDHL4_400M_050219_1,6737 SUDHL4_400M_050219_1,6737,RQGFVPAAY False True RQGFVPAAY 35.42529 504.76671141386 10133889.0 6734.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 7.218307813008626 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6738 35.427 58.0 1601200.0 25 0 193420.0 + 20152 LKPGILPVPK 10 92 531.357428828523 1060.700304723846 2 531.3578979372978 MULTI CID FTMS 0 0 0 6734 1219209.125 0.1615980706193658 -4 0.2721519470214844 4 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 40.72490554402381 0.149912226101682 5 K{I|L}AP{I|L}VKD{I|L} 9 -1 92.847 0.0 0.0 8.7534 0.0 0.0 0.0 80.0513170831664 80.0513170831664 71.12527005830657 0.0 0.0 0.0 0 2.325257498915996 1.154901959985743 1.1237125054200234 0.0 K{I|L}AP{I|L}VKD{I|L} 8.7534 - 383 + 1 2.082 73541.1 1.0 2562 4174 6734 SUDHL4_400M_050219_1,6738 SUDHL4_400M_050219_1,6738,LKPGILPVPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6739 35.429 133.0 412760.0 25 0 38810.0 + 1282 AIQDEIRSV 9 79 515.7798524081978 1029.5451518831956 2 515.7804443240166 MULTI CID FTMS 0 0 0 6734 301198.34375 0.7449923138235544 -2 0.1534957885742187 5 Unmodified _AIQDEIRSV_ ENSG00000164109|ENST00000296509|MAD2L1;ENST00000504707.1_1_4:120981275-120987923:-|nuORF 38.17557092003332 0.0854718145212029 5 [{I|L}A]QDE{I|L}RSV 9 0 + 65.255 0.0 0.0 6.3383 6.3383 90.76 0.0 0.0 0.0 53.83528431580359 6.226913443286918 6.226913443286918 9.208187539523747 0 0.3494850021680094 2.0 0.8252574989159953 0.3807196863200844 + + [{I|L}A]QDE{I|L}RSV;[{I|L}A][AG]DE{I|L}RSV 6.3383;5.4439 +;- + 50 + 1 2.082 46397.1 1.0 2563 4174 6734 SUDHL4_400M_050219_1,6739 SUDHL4_400M_050219_1,6739,AIQDEIRSV True True AIQDEIRSV 35.429467 515.780444324017 1871627.5 6734.0 ENST00000504707.1_1_4:120981275-120987923:-|nuORF;;ENSG00000164109|ENST00000296509|MAD2L1 4.957112471262614 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6740 35.432 135.0 555580.0 25 0 65034.0 + 20360 LLGGVCRSC 9 119 454.2266295497984 906.4387061663969 2 454.2268554568291 MULTI CID FTMS 0 0 0 6734 205997.546875 0.9482550396248594 -1 0.0871467590332031 6 Unmodified _LLGGVCRSC_ REV__ENST00000167106.8_2_14:77228891-77229116:+|nuORF 15.847184025352805 0.4077185912009129 5 {I|L}{I|L}{[NV]|[RG]}T 5 -1 19.493 0.0 0.0 2.1505 0.0 0.0 0.0 363.0898531549438 363.0898531549438 4.008556860707131 0.0 0.0 0.0 0 0.0 2.0 0.2742275032520141 0.5 {I|L}{I|L}{[NV]|[RG]}T 2.1505 - 48 + 1 2.082 60827.4 1.0 2564 4174 6734 SUDHL4_400M_050219_1,6740 SUDHL4_400M_050219_1,6740,LLGGVCRSC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6742 35.443 497.0 236310.0 25 0 26012.0 + 45340 YSMPVHAAV 9 140 487.74171660717207 0 487.7424194216728 PEAK CID FTMS 0 0 0 6741 70482.21875 0.8363748724238991 1 -0.0725250244140625 1 Unmodified _YSMPVHAAV_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 40.44857923139169 0.0595120860820594 5 SM 2 7 13.711 0.0 0.0 1.4085 0.0 0.0 163.06319288055664 589.3142183893186 752.3774112698752 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + SM 1.4085 + + 169 + 1 2.082 92514.9 1.0 2565 4175 6741 SUDHL4_400M_050219_1,6742 SUDHL4_400M_050219_1,6742,YSMPVHAAV True True YSMPVHAAV 35.443194 487.742419421673 438232.0625 6741.0 ENSG00000071794|ENST00000310053|HLTF;;nc|ENSG00000071794|Q14527-2|HLTF 7.806362946828206 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6743 35.446 142.0 540000.0 25 0 63398.0 + 18435 KYAKEMGLI 9 102 351.5314691745449 1051.5725781238348 3 351.5318786501884 MULTI CID FTMS 0 0 0 6741 348738.40625 0.4184975229448144 -2 0.1012458801269531 2 Unmodified _KYAKEMGLI_ REV__ENSG00000080200|ENST00000389622|CRYBG3 20.453626601364224 0.2830276176381075 5 ME 2 -1 15.177 0.0 0.0 1.4433 0.0 0.0 301.19435654355976 487.26719080142817 788.4615473449879 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.7302046884880937 0.0 ME 1.4433 - 85 + 1 2.082 66496.9 1.0 2566 4175 6741 SUDHL4_400M_050219_1,6743 SUDHL4_400M_050219_1,6743,KYAKEMGLI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6744 35.452 318.0 417660.0 25 0 48289.0 + 17967 KRGPVPPG 8 164 404.2454262156392 806.4762994980783 2 404.2455322146416 MULTI CID FTMS 0 0 0 6741 221317.703125 0.7441633880430822 -1 0.01409912109375 3 Unmodified _KRGPVPPG_ REV__ENST00000324849.8_1_8:17104467-17104572:+|nuORF 5.760428011301431 0.7893668129297577 5 {I|L}{I|L}{I|L}HR 5 -1 39.795 0.0 0.0 4.9344 0.0 0.0 156.05188316566472 0.0 156.05188316566472 0.0 29.416265449392363 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.2614393726401688 {I|L}{I|L}{I|L}HR 4.9344 - 69 + 1 2.082 103466.3 1.0 2567 4175 6741 SUDHL4_400M_050219_1,6744 SUDHL4_400M_050219_1,6744,KRGPVPPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6745 35.46 478.0 323270.0 25 0 35770.0 + 43016 VVYPKPEQL 9 161 536.8058428461842 1071.5971327591683 2 536.8056518435478 MULTI CID FTMS 0 0 0 6741 153738.5 1.0 0 0.0 4 Unmodified _VVYPKPEQL_ ENSG00000142188|ENST00000542230|TMEM50B;ENST00000474272.1_1_21:34837628-34839441:-|nuORF 34.40172386719151 0.1061884637610825 5 VVYPK[EP]Q{I|L} 9 0 + 46.44 0.0 0.0 4.3337 4.3337 87.1 0.0 0.0 0.0 25.05333802120175 3.423873620952378 3.423873620952378 14.762809413564645 0 0.3807196863200844 1.6989700043360187 0.0 0.8441876774005249 + + VVYPK[EP]Q{I|L};VVYPK[EP][AG]{I|L};{I|L}{I|L}{[RE]|[WV]}VQSD{I|L};VVYPKG[DV]PV;VVYPK[EP]AAV;VV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[EP]Q{I|L};{I|L}{I|L}[MT]K[EP]Q{I|L};{I|L}{I|L}{[RE]|[WV]}V[AG]SD{I|L};{I|L}{I|L}N[{M(Oxidation (M))|F}V][EP]Q{I|L};{I|L}{I|L}{[RE]|[WV]}SD{I|L}N{I|L} 4.3337;2.956;2.8636;2.6774;2.38;2.1074;2.0758;2.0043;1.7376;1.6609 +;-;-;-;-;-;-;-;-;- + 2188 + 1 2.082 121485.1 1.0 2568 4175 6741 SUDHL4_400M_050219_1,6745 SUDHL4_400M_050219_1,6745,VVYPKPEQL True True VVYPKPEQL 35.460288 536.805651843548 3388113.5 6741.0 ENST00000474272.1_1_21:34837628-34839441:-|nuORF;;ENSG00000142188|ENST00000542230|TMEM50B 5.5030837059021 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6746 35.474 800.0 76927.0 25 0 20420.0 -1 0 37 1194.8147725365975 3581.4224882099934 3 1195.482958972454 MULTI CID FTMS 0 0 0 6741 132386.3125 0.7093333154731457 -1 0.01409912109375 5 5 G 1 -1 6.9897 0.0 0.0 0.19517 0.0 0.0 2147.7533494078566 1373.629538140947 3521.3828875488034 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19517 - 8 + 1 2.082 56550.7 0.5099999904632568 2569 4175 6741 SUDHL4_400M_050219_1,6746 SUDHL4_400M_050219_1,6746, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6747 35.488 800.0 150480.0 25 0 16141.0 10117 FPWPCQHHCFY 11 115 732.8055541022319 1463.5965552712637 2 732.8040649294853 MULTI CID FTMS 0 0 0 6741 126106.125 1.0 0 0.0 6 Unmodified _FPWPCQHHCFY_ ENST00000501122.2_1_11:65211061-65211343:+|nuORF 13.90604991867851 0.7458848613461305 5 [AG]DQ[HN]AQQDA{M(Oxidation (M))|F}Y 13 10 + 92.472 0.0 0.0 6.3181 6.3181 83.325 0.0 0.0 0.0 5.49681237692306 16.642078980768076 5.49681237692306 1.7731749024395924 0 0.5 1.3010299956639813 0.9476212463643424 1.2302046884880935 [AG]DQ[HN]AQQDA{M(Oxidation (M))|F}Y;[AG]DQA[HN]QQDA{M(Oxidation (M))|F}Y;[AG]DAG[HN]AQQDA{M(Oxidation (M))|F}Y;[AG]DAQ[HN]QQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AG[HN]AQQDA{M(Oxidation (M))|F}Y;[AG]N[HN]EAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AGA[HN]QQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}Q[HN]AQQDA{M(Oxidation (M))|F}Y;[AG]DAGA[HN]QQDA{M(Oxidation (M))|F}Y;[AG]NE[HN]AQQDA{M(Oxidation (M))|F}Y 6.3181;6.197;6.1575;5.9921;5.9425;5.8618;5.8214;5.8147;5.7461;5.7407 -;-;-;-;-;-;-;-;-;- 2597 1 2.082 99549.2 0.7200000286102295 2570 4175 6741 SUDHL4_400M_050219_1,6747 SUDHL4_400M_050219_1,6747,FPWPCQHHCFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6748 35.491 142.0 315520.0 25 0 29525.0 + -1 LIIVCCTAP 9 75 495.2637201130357 988.5128872928714 2 495.2643005251884 MULTI CID FTMS 0 0 0 6741 138447.671875 0.1773197664994326 3 -0.1418914794921875 7 Carbamidomethyl (C) _LIIVC(Carbamidomethyl (C))CTAP_ REV__ENSG00000107331|ENST00000341511|ABCA2;REV__ENST00000459850.5_1_9:139905575-139923366:-|nuORF;REV__ENST00000487109.5_1_9:139906084-139911410:-|nuORF;REV__nc|ENSG00000107331|Q9BZC7-2|ABCA2;REV__nc|ENSG00000107331|Q9BZC7-4|ABCA2;REV__nc|ENSG00000107331|Q9BZC7|ABCA2 12.531546534597751 0.4974689918368763 5 {I|L}{I|L}[WC(Carbamidomethyl (C))][W{I|L}]V 7 -1 + 24.805 0.0 0.0 2.5093 2.5093 84.354 0.0 0.0 0.0 11.70605767996264 9.33053210369387 9.33053210369387 24.80500147140461 0 0.0 2.0 0.0 0.0 {I|L}{I|L}[WC(Carbamidomethyl (C))][W{I|L}]V 2.5093 - 71 + 1 2.082 40098.8 1.0 2571 4175 6741 SUDHL4_400M_050219_1,6748 SUDHL4_400M_050219_1,6748,LIIVCCTAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6749 35.505 800.0 71316.0 25 0 6166.0 -1 0 84 994.4324141805176 2980.2754131417523 3 995.1024658083916 MULTI CID FTMS 0 0 0 6741 113773.0859375 1.0 0 0.0 8 5 {[QS]|[NT]}VDT{I|L} 6 -1 27.005 0.0 0.0 0.90611 0.0 0.0 0.0 2333.932858780677 2333.932858780677 10.248336549797138 0.0 0.0 0.0 0 0.0 0.0 1.2134679910804405 0.0 {[QS]|[NT]}VDT{I|L} 0.90611 - 1137 1 2.082 43227.1 0.6000000238418579 2572 4175 6741 SUDHL4_400M_050219_1,6749 SUDHL4_400M_050219_1,6749, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6751 35.515 357.0 127410.0 25 0 7201.3 + 29829 QQLGKVVQVY 10 91 581.3347662690476 1160.654979604895 2 581.3353149294853 MULTI CID FTMS 0 0 0 6750 155842.53125 0.2743149937446671 3 -0.1068954467773437 1 Unmodified _QQLGKVVQVY_ ENST00000495104.1_1_4:165841962-165842070:-|nuORF 20.453626601364224 0.5043500229302764 5 VY 2 8 22.391 0.0 0.0 1.9291 0.0 0.0 880.5121706222764 0.0 880.5121706222764 0.0 11.42159058960253 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + VY 1.9291 + + 292 + 1 2.072 38900.5 1.0 2573 4176 6750 SUDHL4_400M_050219_1,6751 SUDHL4_400M_050219_1,6751,QQLGKVVQVY False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6752 35.516 67.0 908830.0 25 0 89701.0 + 11807 GLMKKAYEL 9 92 526.7941610074148 1051.5737690816295 2 526.7947265505791 MULTI CID FTMS 0 0 0 6750 750212.25 0.869933662408604 -1 0.0725250244140625 2 Unmodified _GLMKKAYEL_ chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;ENSG00000068305|ENST00000557942|MEF2A;ENSG00000081189|ENST00000504921|MEF2C;ENSG00000116604|ENST00000348159|MEF2D;ENSG00000213999|ENST00000424583|MEF2B;ENST00000558983.5_1_15:100173318-100211695:+|nuORF;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000068305|Q02078-4|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;nc|ENSG00000068305|Q02078|MEF2A;nc|ENSG00000081189|Q06413-2|MEF2C;nc|ENSG00000081189|Q06413-3|MEF2C;nc|ENSG00000081189|Q06413-4|MEF2C;nc|ENSG00000081189|Q06413-5|MEF2C;nc|ENSG00000081189|Q06413-6|MEF2C;nc|ENSG00000116604|Q14814-2|MEF2D;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-4|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D;nc|ENSG00000116604|Q14814-6|MEF2D;nc|ENSG00000213999|Q02080|MEF2B 31.26834338654808 0.1333407332142048 5 {I|L}GMK 4 7 52.735 0.0 0.0 5.0149 0.0 0.0 0.0 619.3130210849135 619.3130210849135 35.38872836444014 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}GMK 5.0149 - 117 + 1 2.072 51404.1 1.0 2574 4176 6750 SUDHL4_400M_050219_1,6752 SUDHL4_400M_050219_1,6752,GLMKKAYEL False True GLMKKAYEL 35.516352 526.794726550579 4347897.5 6750.0 ENST00000558983.5_1_15:100173318-100211695:+|nuORF;;nc|ENSG00000116604|Q14814-4|MEF2D;;ENSG00000116604|ENST00000348159|MEF2D;;nc|ENSG00000068305|Q02078|MEF2A;;nc|ENSG00000068305|Q02078-6|MEF2A;;chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;;nc|ENSG00000081189|Q06413-2|MEF2C;;nc|ENSG00000081189|Q06413-3|MEF2C;;nc|ENSG00000068305|Q02078-4|MEF2A;;ENSG00000213999|ENST00000424583|MEF2B;;ENSG00000068305|ENST00000557942|MEF2A;;nc|ENSG00000068305|Q02078-5|MEF2A;;nc|ENSG00000081189|Q06413-5|MEF2C;;nc|ENSG00000213999|Q02080|MEF2B;;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;;nc|ENSG00000068305|Q02078-3|MEF2A;;nc|ENSG00000116604|Q14814-6|MEF2D;;nc|ENSG00000116604|Q14814-2|MEF2D;;ENSG00000081189|ENST00000504921|MEF2C;;nc|ENSG00000081189|Q06413-6|MEF2C;;nc|ENSG00000081189|Q06413-4|MEF2C;;nc|ENSG00000116604|Q14814-3|MEF2D;;nc|ENSG00000116604|Q14814-5|MEF2D 6.062409400939941 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6753 35.518 74.0 1142700.0 25 0 157600.0 + 23510 LTKKKTSKK 9 94 354.57403916522395 1060.700288095872 3 354.5740844607353 MULTI CID FTMS 0 0 0 6750 602844.75 0.7616590977305984 -2 0.0866241455078125 3 Unmodified _LTKKKTSKK_ REV__ENSG00000084093|ENST00000309042|REST;REV__nc|ENSG00000084093|Q13127-4|REST 4.189502756095605 0.7684307469601125 5 [{I|L}P][KA]{I|L}VPPVK 10 -1 [{I|L}P][KA]{I|L} + + 26.682 5.6864 1.0886 2.5155 2.5155 53.432 0.0 0.0 0.0 0.0 18.2711470149615 0.0 0.0 0 1.0 0.0 0.0 0.0 [{I|L}P][KA]{I|L}VPPVK 2.5155 - 76 + 1 2.072 81013.2 1.0 2575 4176 6750 SUDHL4_400M_050219_1,6753 SUDHL4_400M_050219_1,6753,LTKKKTSKK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6754 35.522 223.0 501350.0 25 0 54812.0 + 1248 AILDHNPSI 9 108 490.2641889880349 978.5138250428698 2 490.2646057009697 MULTI CID FTMS 0 0 0 6750 291966.03125 0.440313018673348 -2 0.0866241455078125 4 Unmodified _AILDHNPSI_ ENSG00000131242|ENST00000621161|RAB11FIP4;ENST00000578148.1_1_17:29858134-29858747:+|nuORF;nc|ENSG00000131242|Q86YS3-2|RAB11FIP4 53.40400417844725 0.0329064971918313 5 [{I|L}A]MAYNSP{I|L} 9 5 [{I|L}A] + + 42.968 23.724 12.885 4.3912 4.3912 57.392 0.0 0.0 0.0 0.0 18.11874108507752 0.0 0.0 0 1.2614393726401687 0.0 0.2614393726401688 0.3494850021680094 [{I|L}A]MAYNSP{I|L} 4.3912 - 824 + 1 2.072 89286.8 1.0 2576 4176 6750 SUDHL4_400M_050219_1,6754 SUDHL4_400M_050219_1,6754,AILDHNPSI True True AILDHNPSI 35.52225 490.26460570097 3201388.0 6750.0 nc|ENSG00000131242|Q86YS3-2|RAB11FIP4;;ENSG00000131242|ENST00000621161|RAB11FIP4;;ENST00000578148.1_1_17:29858134-29858747:+|nuORF 6.237290064493815 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6755 35.525 117.0 439700.0 25 0 30353.0 + 29620 QMAEIAVNA 9 97 473.7359261553861 945.457299377572 2 473.7369262576103 MULTI CID FTMS 0 0 0 6750 262604.46875 1.0 0 0.0 5 Unmodified _QMAEIAVNA_ ENSG00000150753|ENST00000280326|CCT5;ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5 43.85829265575387 0.0542763391141878 5 {[CP]|[EA]}MQ{I|L}A{[{M(Oxidation (M))|F}H]|[RQ]} 8 7 + 26.626 0.0 0.0 2.8162 2.8162 75.361 0.0 0.0 0.0 2.7960653495854544 5.484550065040281 2.7960653495854544 2.7960653495854544 0 0.0 0.0 1.1382104921644451 0.6861818737241735 {[CP]|[EA]}MQ{I|L}A{[{M(Oxidation (M))|F}H]|[RQ]};{[DA]|[EG]}V{[WT]|[RM]}A{[{M(Oxidation (M))|F}H]|[RQ]};{[DA]|[EG]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}A{[{M(Oxidation (M))|F}H]|[RQ]};{[DA]|[EG]}V{[CA]|SS}{I|L}A{[{M(Oxidation (M))|F}H]|[RQ]};{[NV]|[RG]}[MD]{I|L}A{[{M(Oxidation (M))|F}H]|[RQ]};{[CP]|[EA]}{I|L}C(Carbamidomethyl (C))VA{[{M(Oxidation (M))|F}H]|[RQ]};{[CP]|[EA]}M[AG]{I|L}A{[{M(Oxidation (M))|F}H]|[RQ]};[QT]{I|L}[WD]{[{M(Oxidation (M))|F}H]|[RQ]};{[NV]|[RG]}K{[QC]|[C(Carbamidomethyl (C))A]}A{[{M(Oxidation (M))|F}H]|[RQ]};{[DA]|[EG]}V{[VA]|[{I|L}G]}{[MG]|[TS]}{[{M(Oxidation (M))|F}H]|[RQ]} 2.8162;2.5204;2.1531;2.099;1.9427;1.4195;1.1108;0.83251;0.32355;0.28264 -;-;-;-;-;-;-;-;-;- 127 1 2.072 45883.9 1.0 2577 4176 6750 SUDHL4_400M_050219_1,6755 SUDHL4_400M_050219_1,6755,QMAEIAVNA True True QMAEIAVNA 35.524677 473.73692625761 1607843.0 6750.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5;;ENST00000423695.6_1_5:10250480-10261980:+|nuORF 3.9177280267079673 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6756 35.532 413.0 310270.0 25 0 39407.0 + + -1 RLYGYFHDA 9 112 571.2781070710178 0 571.2756835818291 PEAK CID FTMS 0 0 0 6750 185085.90625 0.7474191147636043 -2 0.0866241455078125 6 Carbamidomethyl (C) _QC(Carbamidomethyl (C))NKIRHGE_ chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;ENSG00000087586|ENST00000395915|AURKA 15.847184025352805 0.2451986057151378 5 DH{M(Oxidation (M))|F}Y 4 -1 30.191 0.0 0.0 2.6471 0.0 0.0 89.05198155036744 486.2483004205688 575.3002819709362 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 DH{M(Oxidation (M))|F}Y 2.6471 - 83 + 1 2.072 98234.8 1.0 2578 4176 6750 SUDHL4_400M_050219_1,6756 SUDHL4_400M_050219_1,6756,QCNKIRHGE False False RLYGYFHDA 35.532067 571.275683581829 1287849.625 6750.0 chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;;ENSG00000087586|ENST00000395915|AURKA 7.396053155263265 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6757 35.546 800.0 180200.0 25 0 10545.0 + 43408 WQTVVGKTY 9 170 541.2873111913101 1080.56006944942 2 541.2877075076103 MULTI CID FTMS 0 0 0 6750 149444.171875 1.0 0 0.0 7 Unmodified _WQTVVGKTY_ ENSG00000023734|ENST00000419869|STRAP;nc|ENSG00000023734|Q9Y3F4-2|STRAP 72.96794272382148 0.0199516581995792 5 [WQ]TVVGKTY 9 0 [WQ] + + 45.271 21.734 6.9187 4.1896 4.1896 56.688 0.0 0.0 0.0 0.0 8.033782831925919 0.0 0.0 0 0.7742275032520141 0.0 1.055462187404089 0.0 + + [WQ]TVVGKTY 4.1896 + + 885 + 1 2.072 111970.2 0.6899999976158142 2579 4176 6750 SUDHL4_400M_050219_1,6757 SUDHL4_400M_050219_1,6757,WQTVVGKTY True True WQTVVGKTY 35.545898 541.28770750761 821020.625 6750.0 nc|ENSG00000023734|Q9Y3F4-2|STRAP;;ENSG00000023734|ENST00000419869|STRAP 7.111058870951335 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6758 35.554 469.0 158530.0 25 0 8899.8 -1 0 71 910.9155462434372 1819.8165395536744 2 910.916552722454 MULTI CID FTMS 0 0 0 6750 129561.859375 0.7736928752536302 1 -0.0555801391601562 8 5 EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 7 -1 53.588 0.0 0.0 2.9447 0.0 0.0 991.4744996383076 0.0 991.4744996383076 0.0 34.33561654977865 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.805462187404089 EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 2.9447 - 86 1 2.072 54013.7 1.0 2580 4176 6750 SUDHL4_400M_050219_1,6758 SUDHL4_400M_050219_1,6758, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6759 35.56 335.0 287690.0 25 0 60451.0 42135 VRSGARPG 8 135 400.23179394037976 0 400.2317382693291 PEAK CID FTMS 0 0 0 6750 104493.453125 0.4087259535300568 -4 0.2401199340820312 9 Unmodified _VRSGARPG_ ENSG00000175455|ENST00000409697|CCDC14;ENST00000438440.2_1_3:123674869-123680035:-|nuORF;ENST00000463996.1_1_3:123616454-123680035:-|nuORF;ENST00000477268.5_1_3:123667910-123680164:-|nuORF;ENST00000483247.1_1_3:123634127-123680035:-|nuORF;ENST00000495381.5_1_3:123675585-123680164:-|nuORF;nc|ENSG00000175455|Q49A88-5|CCDC14;nc|ENSG00000175455|Q49A88-6|CCDC14;nc|ENSG00000175455|Q49A88|CCDC14 2.059750862983233 0.5930426321653702 5 V 1 7 1.1092 0.0 0.0 0.13892 0.0 0.0 417.21134681455015 279.1444185846313 696.3557653991815 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.13892 + + 2 + 1 2.072 79289.7 1.0 2581 4176 6750 SUDHL4_400M_050219_1,6759 SUDHL4_400M_050219_1,6759,VRSGARPG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6761 35.565 58.0 750950.0 25 0 71806.0 + 20581 LLNVEPAGA 9 85 442.2477748072325 882.480996681265 2 442.2478820681572 MULTI CID FTMS 0 0 0 6760 666930.5 0.2338021461382386 2 -0.0513153076171875 1 Unmodified _LLNVEPAGA_ ENST00000534096.5_1_19:50838046-50848012:-|nuORF;ENST00000534789.5_1_19:50838228-50848012:-|nuORF 36.04419817259434 0.0971720506436186 5 {I|L}{I|L}NVE 5 4 33.416 0.0 0.0 3.7866 0.0 0.0 0.0 311.1353905623775 311.1353905623775 7.464577609514471 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {I|L}{I|L}NVE 3.7866 + + 185 1 2.065 40773.1 1.0 2582 4177 6760 SUDHL4_400M_050219_1,6761 SUDHL4_400M_050219_1,6761,LLNVEPAGA True True LLNVEPAGA 35.56531 442.247882068157 29822426.0 6760.0 ENST00000534096.5_1_19:50838046-50848012:-|nuORF;;ENST00000534789.5_1_19:50838228-50848012:-|nuORF 6.346695899963379 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6762 35.569 215.0 254470.0 25 0 28696.0 + 29880 QRKNKDAPALP 11 97 413.2389218098328 0 413.2396118044853 PEAK CID FTMS 0 0 0 6760 227800.234375 0.927837233058215 4 -0.0829200744628906 2 Unmodified _QRKNKDAPALP_ REV__ENSG00000171385|ENST00000302127|KCND3;REV__nc|ENSG00000171385|Q9UK17-2|KCND3 3.2813086475875832 0.4761840153648598 5 E 1 -1 0.71334 0.0 0.0 0.086521 0.0 0.0 596.3156599265031 96.08264337711172 692.3983033036149 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.086521 - 5 + 1 2.065 47565.7 1.0 2583 4177 6760 SUDHL4_400M_050219_1,6762 SUDHL4_400M_050219_1,6762,QRKNKDAPALP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6763 35.571 67.0 842180.0 25 0 74774.0 + 22722 LQHPNIVGY 9 76 520.7800185950292 1039.5454842568583 2 520.7801391482353 MULTI CID FTMS 0 0 0 6760 692011.0 0.7990337272461768 -4 0.2293510437011718 3 Unmodified _LQHPNIVGY_ ENSG00000086232|ENST00000199389|EIF2AK1;nc|ENSG00000086232|Q9BQI3-2|EIF2AK1 34.10243960390752 0.1078313939113124 5 [NP]{I|L}HQ{I|L}VGY 9 5 + 62.367 0.0 0.0 5.9994 5.9994 90.065 0.0 0.0 0.0 2.922152515121219 53.4145724848073 2.922152515121219 9.208187539523747 0 1.2396518287104437 0.0 0.0 0.3807196863200844 [NP]{I|L}HQ{I|L}VGY;[NP]{I|L}H[AG]{I|L}VGY;[NP]{I|L}HQ{I|L}GVY;[VG][PA]HQ{I|L}VGY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VGY;[NP]{I|L}H[AG]{I|L}GVY;[VG][PA]HQ{I|L}GVY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{I|L}VGY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}GVY;[VG][PA]H[AG]{I|L}VGY 5.9994;5.1137;5.0595;4.9646;4.7191;4.1737;4.0247;3.8333;3.7791;3.7168 -;-;-;-;-;-;-;-;-;- 118 1 2.065 50371.6 1.0 2584 4177 6760 SUDHL4_400M_050219_1,6763 SUDHL4_400M_050219_1,6763,LQHPNIVGY True True LQHPNIVGY 35.570991 520.780139148235 4688531.5 6760.0 ENSG00000086232|ENST00000199389|EIF2AK1;;nc|ENSG00000086232|Q9BQI3-2|EIF2AK1 5.245827515920003 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6764 35.574 158.0 497890.0 25 0 60040.0 + 1300 AIVDKVPSV 9 108 464.27911546026814 926.5436779873364 2 464.2792846560478 MULTI CID FTMS 0 0 0 6760 218828.953125 0.0469973217701858 -19 0.8785934448242188 4 Unmodified _AIVDKVPSV_ ENSG00000181789|ENST00000314797|COPG1 27.628801355627647 0.1796483985696185 5 [{I|L}A]VDKVPSV 9 0 + 49.773 0.0 0.0 5.372 5.372 89.713 0.0 0.0 0.0 17.823702898387015 8.570971873949162 8.570971873949162 11.276096590549583 0 0.4247425010840047 2.0 0.2215141619232908 0.0 + + [{I|L}A]VDKVPSV;[{I|L}A]VDKV[VS]P;[{I|L}A]VDK[TP]A{I|L};[{I|L}A]VDK[{I|L}T]AP;[{I|L}A][KT]{I|L}[DV][PA];[{I|L}A]V[TP][Q{I|L}]SV 5.372;4.1549;3.6564;3.4111;2.7913;2.4038 +;-;-;-;-;- + 424 + 1 2.065 62437.0 1.0 2585 4177 6760 SUDHL4_400M_050219_1,6764 SUDHL4_400M_050219_1,6764,AIVDKVPSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6766 35.579 157.0 380060.0 25 0 57558.0 + 14881 ILLDNDHYA 9 97 537.2651067059345 1072.515660478669 2 537.2671996951103 MULTI CID FTMS 0 0 0 6765 307678.78125 0.9984745602343348 2 -0.0439643859863281 1 Unmodified _ILLDNDHYA_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 17.11289562659939 0.3734572693229295 5 {I|L}{I|L}{I|L}D[DN]A{[WN]|[YH]} 9 2 + 48.874 0.0 0.0 4.5569 4.5569 78.639 0.0 0.0 0.0 35.50907468880581 1.4511996594528398 1.4511996594528398 2.04119982655925 0 0.0 2.0 0.0 0.0 {I|L}{I|L}{I|L}D[DN]A{[WN]|[YH]};{I|L}{I|L}{I|L}D[DN][HS]{M(Oxidation (M))|F};{I|L}{I|L}{I|L}D{[WN]|[YH]}{[WN]|[YH]};{I|L}{I|L}{I|L}[{M(Oxidation (M))|F}E][YE]{M(Oxidation (M))|F};{I|L}[HD]{I|L}G[WE]G{M(Oxidation (M))|F};{I|L}[HD]{I|L}GWW{M(Oxidation (M))|F};{I|L}[HD]{I|L}H[YE]{M(Oxidation (M))|F};{I|L}[HD]{I|L}[{M(Oxidation (M))|F}E]{[WN]|[YH]} 4.5569;4.3666;3.9529;3.4819;1.4332;1.3906;1.1099;0.39394 -;-;-;-;-;-;-;- 219 + 1 2.065 49652.5 1.0 2586 4178 6765 SUDHL4_400M_050219_1,6766 SUDHL4_400M_050219_1,6766,ILLDNDHYA False True ILLDNDHYA 35.579426 537.26719969511 1872671.25 6765.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 4.492314338684082 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6767 35.593 800.0 133970.0 25 0 19233.0 -1 0 94 674.6917060466122 2021.0532887400368 3 675.0256225466728 MULTI CID FTMS 0 0 0 6765 106568.484375 0.6420488643292317 -13 0.7512092590332031 2 5 KPTGAR 6 -1 51.177 0.0 0.0 2.5322 0.0 0.0 1024.4794069066347 383.1948336236938 1407.6742405303285 0.0 0.0 0.0 0.0 0 1.0 0.0 0.7302046884880937 0.5994850021680094 KPTGAR 2.5322 - 397 + 1 2.065 84876.1 0.6299999952316284 2587 4178 6765 SUDHL4_400M_050219_1,6767 SUDHL4_400M_050219_1,6767, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6768 35.607 800.0 90910.0 25 0 11883.0 + -1 WLNQYCSHAFY 11 85 744.8235017283808 1487.6324505235616 2 745.3248168826103 MULTI CID FTMS 0 0 0 6765 100949.34375 1.0 0 0.0 3 Carbamidomethyl (C) _WLNQYC(Carbamidomethyl (C))SHAFY_ REV__ENSG00000091128|ENST00000388781|LAMB4;REV__ENST00000475469.1_1_7:107703197-107763609:-|nuORF;REV__nc|ENSG00000091128|A4D0S4-3|LAMB4 12.240655878213236 0.7805268987462184 5 [WH]{[HG]|PP}EAQENA[Y{M(Oxidation (M))|F}] 12 -1 + 56.59 0.0 0.0 3.8041 3.8041 77.574 0.0 0.0 0.0 1.4904371307691378 39.38929028995882 1.4904371307691378 3.0102999566398125 0 0.8252574989159953 0.0 0.0 0.8494850021680094 [WH]{[HG]|PP}EAQENA[Y{M(Oxidation (M))|F}];[WH]{[HG]|PP}EAEQNA[Y{M(Oxidation (M))|F}];[WH]{[HG]|PP}EAQQDA[Y{M(Oxidation (M))|F}];[WH]{[HG]|PP}PCQENA[Y{M(Oxidation (M))|F}];[WH][WH]AQENA[Y{M(Oxidation (M))|F}];[WH]{[HG]|PP}PCQQDA[Y{M(Oxidation (M))|F}];[WH]{[HG]|PP}PCEQNA[Y{M(Oxidation (M))|F}];[WH]{[HG]|PP}EA[AG]ENA[Y{M(Oxidation (M))|F}];[WH]{[HG]|PP}EAQEGGA[Y{M(Oxidation (M))|F}];[WH][WH]AEQNA[Y{M(Oxidation (M))|F}] 3.8041;3.6017;3.6017;3.3994;3.3596;3.197;3.197;3.1925;3.1925;3.1573 -;-;-;-;-;-;-;-;-;- 1295 1 2.065 59900.9 0.6299999952316284 2588 4178 6765 SUDHL4_400M_050219_1,6768 SUDHL4_400M_050219_1,6768,WLNQYCSHAFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6769 35.612 239.0 306960.0 25 0 46237.0 -1 0 95 481.2311585775498 480.2238821109498 1 481.2306091189384 MULTI CID FTMS 0 0 0 6765 98927.59375 0.3668290949862674 4 -0.0959396362304687 4 5 {M(Oxidation (M))|F}DS{I|L} 4 -1 + 15.583 0.0 0.0 3.245 3.245 77.71 0.0 0.0 0.0 3.3648752958484387 0.89062518744797 0.89062518744797 4.121804477866474 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}DS{I|L};{M(Oxidation (M))|F}DTV;{[DA]|[EG]}Y{I|L} 3.245;2.3867;0.3529 -;-;- 23 + 1 2.065 60566.3 1.0 2589 4178 6765 SUDHL4_400M_050219_1,6769 SUDHL4_400M_050219_1,6769, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6771 35.616 22.0 3145000.0 25 0 707810.0 + 39224 TYYGSFVTR 9 59 547.26924479431 1092.52393665542 2 547.2696411013603 MULTI CID FTMS 0 0 0 6770 2413507.75 0.5089441882861816 3 -0.05841064453125 1 Unmodified _TYYGSFVTR_ ENSG00000147677|ENST00000521861|EIF3H;ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 33.4449034751529 0.1114409586740657 5 [YT]YGS{M(Oxidation (M))|F}VTR 9 0 + 73.61 0.0 0.0 6.7376 6.7376 94.562 0.0 0.0 0.0 58.71141926002072 17.324229892291484 17.324229892291484 19.20818753952375 0 0.4247425010840047 2.0 0.3807196863200844 0.6382104921644451 + + [YT]YGS{M(Oxidation (M))|F}VTR;[YT]Y[YQ]VTR;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{M(Oxidation (M))|F}SGY[{M(Oxidation (M))|F}V];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[YQ]Y[{M(Oxidation (M))|F}V] 6.7376;4.9795;4.0444;1.9378 +;-;-;- + 49 + 1 2.065 56885.5 1.0 2590 4179 6770 SUDHL4_400M_050219_1,6771 SUDHL4_400M_050219_1,6771,TYYGSFVTR True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6772 35.618 83.0 765060.0 25 0 99342.0 + 9723 FLYDDNQRV 9 66 585.282934337562 1168.551315741924 2 585.2833129763603 MULTI CID FTMS 0 0 0 6770 642739.5 0.4059914323512238 3 -0.05841064453125 2 Unmodified _FLYDDNQRV_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 27.628801355627647 0.1796483985696185 5 {I|L}[WP]DDY{I|L}E 8 7 49.201 0.0 0.0 4.2104 0.0 0.0 119.07400710273592 0.0 119.07400710273592 0.0 36.37009080640347 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {I|L}[WP]DDY{I|L}E 4.2104 - 87 1 2.065 51424.5 1.0 2591 4179 6770 SUDHL4_400M_050219_1,6772 SUDHL4_400M_050219_1,6772,FLYDDNQRV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6774 35.623 71.0 837650.0 25 0 66766.0 -1 0 59 874.9054764860379 1747.7964000388756 2 874.9052612185478 MULTI CID FTMS 0 0 0 6773 818634.875 0.2886389908008615 13 -0.4129371643066406 1 5 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 71.362 0.0 0.0 4.083 0.0 0.0 734.3680897443375 0.0 734.3680897443375 0.0 52.109178215846654 0.0 0.0 0 1.25 0.0 0.0 1.274227503252014 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.083 - 169 1 2.065 46711.9 1.0 2592 4180 6773 SUDHL4_400M_050219_1,6774 SUDHL4_400M_050219_1,6774, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6775 35.626 189.0 403940.0 25 0 57224.0 + 17880 KQMEQISQF 9 99 569.7813563191193 1137.5481597050384 2 569.7816039919853 MULTI CID FTMS 0 0 0 6773 279515.0 0.4042329012196205 -4 0.1133308410644531 2 Unmodified _KQMEQISQF_ ENSG00000144834|ENST00000478951|TAGLN3;ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 78.7280429016045 0.0178249292250809 5 [AG]EMKQ{I|L}SQ{M(Oxidation (M))|F} 10 4 + 65.129 0.0 0.0 5.7254 5.7254 87.83 0.0 0.0 0.0 8.973376581028532 8.947340481202069 8.947340481202069 8.973376581028532 0 1.048455006504028 1.5228787452803376 1.555462187404089 0.805462187404089 [AG]EMKQ{I|L}SQ{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MKQ{I|L}SQ{M(Oxidation (M))|F};[AG]EMK[AG]{I|L}SQ{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MK[AG]{I|L}SQ{M(Oxidation (M))|F};[AG]{I|L}D[C(Carbamidomethyl (C))K]{I|L}SQ{M(Oxidation (M))|F};[Q{I|L}]D[C(Carbamidomethyl (C))K]{I|L}SQ{M(Oxidation (M))|F};[AG]EM{I|L}[KQ]SQ{M(Oxidation (M))|F};[AG]ERR{[MG]|[TS]}SQ{M(Oxidation (M))|F};{[ET]|[MV]}D[W{I|L}]{I|L}SQ{M(Oxidation (M))|F};[AG]{M(Oxidation (M))|F}[EP][KQ]SQ{M(Oxidation (M))|F} 5.7254;4.9365;4.9197;4.127;3.8243;3.6695;3.083;2.6906;2.6794;2.4932 -;-;-;-;-;-;-;-;-;- 429 1 2.065 60905.3 1.0 2593 4180 6773 SUDHL4_400M_050219_1,6775 SUDHL4_400M_050219_1,6775,KQMEQISQF True True KQMEQISQF 35.626182 569.781603991985 3414182.5 6773.0 ENSG00000158710|ENST00000368097|TAGLN2;;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;;nc|ENSG00000158710|P37802-2|TAGLN2;;ENSG00000144834|ENST00000478951|TAGLN3 6.0626505215962725 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6776 35.629 166.0 440950.0 25 0 70654.0 + 12607 GVIQPGRGF 9 87 465.7614136374463 929.5082743416926 2 465.7616454958916 MULTI CID FTMS 0 0 0 6773 335087.46875 0.6032329006454595 -7 0.2871017456054687 3 Unmodified _GVIQPGRGF_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 44.40701690623563 0.0526327925666318 5 [VG]{I|L}Q{M(Oxidation (M))|F} 5 4 46.242 0.0 0.0 4.9749 0.0 0.0 0.0 382.18418298892817 382.18418298892817 29.586747011794326 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.0 0.3807196863200844 [VG]{I|L}Q{M(Oxidation (M))|F} 4.9749 - 177 + 1 2.065 61167.2 1.0 2594 4180 6773 SUDHL4_400M_050219_1,6776 SUDHL4_400M_050219_1,6776,GVIQPGRGF True True GVIQPGRGF 35.629434 465.761645495892 3710964.5 6773.0 ENST00000526368.1_1_11:62530297-62533976:+|nuORF;;ENSG00000168002|ENST00000301788|POLR2G;;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 5.906163215637207 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6777 35.643 800.0 184280.0 25 0 16914.0 + 17333 KLVKEVIAV 9 163 499.83414129461465 997.6537296560292 2 499.8346435427666 MULTI CID FTMS 0 0 0 6773 141955.3125 0.2866455278970108 4 -0.09600830078125 4 Unmodified _KLVKEVIAV_ ENSG00000105379|ENST00000309244|ETFB;nc|ENSG00000105379|P38117-2|ETFB 41.95555342248728 0.0647214845423414 5 [{I|L}V]KEKV{I|L}AV 9 2 + 50.817 0.0 0.0 5.0937 5.0937 81.908 0.0 0.0 0.0 4.543967659604057 14.09256854528806 4.543967659604057 3.4948500216800937 0 1.113982988912431 1.154901959985743 0.6237125054200234 0.0 [{I|L}V]KEKV{I|L}AV;[{I|L}V]KEVK{I|L}AV;[K{I|L}]VEKV{I|L}AV;[{I|L}V]KKEV{I|L}AV;[{I|L}V]KEKVA{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}KV{I|L}AV;[K{I|L}]VEVK{I|L}AV;[K{I|L}]VKEV{I|L}AV;[K{I|L}]D{I|L}KV{I|L}AV;[{I|L}V]KEVKA{I|L}V 5.0937;4.7434;4.6382;4.6154;4.4673;4.3283;4.2879;4.16;4.16;4.117 -;-;-;-;-;-;-;+;-;- + 3201 1 2.065 113816.9 0.6100000143051147 2595 4180 6773 SUDHL4_400M_050219_1,6777 SUDHL4_400M_050219_1,6777,KLVKEVIAV True True KLVKEVIAV 35.643249 499.834643542767 2625073.5 6773.0 nc|ENSG00000105379|P38117-2|ETFB;;ENSG00000105379|ENST00000309244|ETFB 3.6128532886505127 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6779 35.65 170.0 244930.0 25 0 28115.0 + 38367 KVADWTGATY 10 70 556.2744684079825 1110.5343838827648 2 556.2753173708916 MULTI CID FTMS 0 0 0 6778 319335.53125 0.2880691534862029 5 -0.1034584045410156 1 Unmodified _TQRLNESTY_ nc|ENSG00000100353|O15371-2|EIF3D;ENSG00000100353|ENST00000216190|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 24.020572477871973 0.2255576514309169 5 ATY 3 7 40.445 0.0 0.0 3.642 0.0 0.0 757.3756581037125 0.0 757.3756581037125 0.0 23.01029995663981 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 ATY 3.642 - 100 1 2.052 37579.6 1.0 2596 4181 6778 SUDHL4_400M_050219_1,6779 SUDHL4_400M_050219_1,6779,TQRLNESTY False False KVADWTGATY 35.65012 556.275317370892 5481416.5 6778.0 nc|ENSG00000100353|O15371-2|EIF3D;;ENSG00000100353|ENST00000216190|EIF3D;;nc|ENSG00000100353|O15371-3|EIF3D 3.493095556894938 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6780 35.664 800.0 186630.0 25 0 21417.0 + 16478 KAISRWSSL 9 151 524.3009099030137 1046.5872668728273 2 524.3016845583916 MULTI CID FTMS 0 0 0 6778 105278.3671875 0.3324597186242047 -6 0.2110252380371093 2 Unmodified _KAISRWSSL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 24.99096001346401 0.2132109383330889 5 KA{I|L}MRRC(Carbamidomethyl (C)){I|L} 8 4 + 45.94 0.0 0.0 4.3895 4.3895 81.855 0.0 0.0 0.0 24.970931420853265 3.645162531850872 3.645162531850872 5.826314394896372 0 1.0356668758921828 0.0 0.0 0.0 KA{I|L}MRRC(Carbamidomethyl (C)){I|L};KA{I|L}MRRGC{I|L};K{I|L}AMRRC(Carbamidomethyl (C)){I|L};K{I|L}AMRRGC{I|L};KA{I|L}S[{I|L}T]AAC(Carbamidomethyl (C)){I|L};KA{I|L}S[TP][KC]S{I|L};{I|L}KAMRRC(Carbamidomethyl (C)){I|L};KA{I|L}{[RE]|[WV]}[KC]S{I|L};KA{I|L}S[{I|L}T]AAGC{I|L};K{I|L}AS[{I|L}T]AAC(Carbamidomethyl (C)){I|L} 4.3895;3.8328;3.81;3.2533;3.1732;3.122;3.1165;2.7854;2.6258;2.5937 -;-;-;-;-;-;-;-;-;- 780 + 1 2.052 117199.7 0.5400000214576721 2597 4181 6778 SUDHL4_400M_050219_1,6780 SUDHL4_400M_050219_1,6780,KAISRWSSL False True KAISRWSSL 35.663953 524.301684558392 1628821.125 6778.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 1.7984519004821775 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6781 35.67 338.0 236250.0 25 0 18473.0 -1 VMDSKIVQV 9 116 517.7808094139025 1033.5470658946049 2 517.7817870974541 MULTI CID FTMS 0 0 0 6778 172070.890625 1.0 0 0.0 3 Oxidation (M) _VM(Oxidation (M))DSKIVQV_ ENSG00000025800|ENST00000373625|KPNA6;ENSG00000114030|ENST00000344337|KPNA1;ENSG00000196911|ENST00000368564|KPNA5 27.628801355627647 0.1796483985696185 5 {M(Oxidation (M))|F} 1 -1 15.485 0.0 0.0 1.4982 0.0 0.0 868.4674893338612 0.0 868.4674893338612 0.0 -4.867574738500341 -4.867574738500341 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.4982 + + 353 + 1 2.052 65308.3 1.0 2598 4181 6778 SUDHL4_400M_050219_1,6781 SUDHL4_400M_050219_1,6781,VMDSKIVQV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6784 35.678 10.0 4174100.0 25 0 531710.0 + 41019 VMDSKIVQV 9 64 509.783520471578 1017.552488009956 2 509.7839233279228 MULTI CID FTMS 0 0 0 6783 4839781.5 0.8392788257820407 2 -0.0584259033203125 1 Unmodified _VMDSKIVQV_ ENSG00000025800|ENST00000373625|KPNA6;ENSG00000114030|ENST00000344337|KPNA1;ENSG00000196911|ENST00000368564|KPNA5 49.55428908609986 0.0413471690215031 5 [KS]D{I|L}VMV{[QV]|[N{I|L}]|[RA]|[KV]} 9 5 + 44.257 0.0 0.0 4.3494 4.3494 78.999 0.0 0.0 0.0 1.249387366082992 27.249873238305288 1.249387366082992 3.0102999566398125 0 0.3807196863200844 0.0 1.1989700043360187 0.0 [KS]D{I|L}VMV{[QV]|[N{I|L}]|[RA]|[KV]};[KS]D{I|L}MVV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}[KS]VMV{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}[KS]MVV{[QV]|[N{I|L}]|[RA]|[KV]};{[ET]|[MV]}D[KT]VV{[QV]|[N{I|L}]|[RA]|[KV]};{[ET]|[MV]}RRMV{[QV]|[N{I|L}]|[RA]|[KV]};{[ET]|[MV]}D[KS]{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};[KS]D{[ET]|[MV]}{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};{[ET]|[MV]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[R{I|L}]QV;{[QV]|[N{I|L}]|[RA]|[KV]}[W{M(Oxidation (M))|F}]{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]} 4.3494;4.0535;2.8168;2.521;2.5002;2.3769;2.1091;1.6981;1.2927;1.0282 -;-;-;-;-;-;+;-;-;- + 187 1 2.052 40370.1 1.0 2599 4183 6783 SUDHL4_400M_050219_1,6784 SUDHL4_400M_050219_1,6784,VMDSKIVQV True True VMDSKIVQV 35.678413 509.783923327923 29784558.0 6783.0 ENSG00000114030|ENST00000344337|KPNA1;;ENSG00000025800|ENST00000373625|KPNA6;;ENSG00000196911|ENST00000368564|KPNA5 4.811078389485677 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6785 35.69 644.0 319600.0 25 0 38163.0 18583 LADGNKLLAP 10 161 506.2954853892952 1010.5764178453904 2 506.2953063845634 MULTI CID FTMS 0 0 0 6783 364009.53125 0.4035473614243629 10 -0.3570518493652344 2 Unmodified _LADGNKLLAP_ ENSG00000149256|ENST00000278550|TENM4 36.12702656103203 0.1984647928738587 5 [VS]{I|L}PP 5 8 46.198 0.0 0.0 4.5714 0.0 0.0 0.0 514.2623385065061 514.2623385065061 32.91006767333147 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 [VS]{I|L}PP 4.5714 - 334 + 1 2.052 158166.8 1.0 2600 4183 6783 SUDHL4_400M_050219_1,6785 SUDHL4_400M_050219_1,6785,LADGNKLLAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6786 35.702 738.0 342730.0 25 0 15292.0 + 36250 SYEDIKNVV 9 210 533.7740002889498 1065.5334476446994 2 533.7755615115166 MULTI CID FTMS 0 0 0 6783 196993.921875 0.1452329655643488 -6 0.1136360168457031 3 Unmodified _SYEDIKNVV_ ENSG00000156017|ENST00000376834|CARNMT1 37.97399986684836 0.0865783450051559 5 [K{I|L}]DDTYVNV 9 7 + 68.978 0.0 0.0 6.4736 6.4736 89.036 0.0 0.0 0.0 7.44982887130989 14.09256854528806 7.44982887130989 7.44982887130989 0 0.8807196863200843 0.8538719643217619 1.360924374808178 0.3494850021680094 [K{I|L}]DDTYVNV;{NN|[MP]|[D{I|L}]|[EV]}KDTYVNV;[K{I|L}]DDYTVNV;[K{I|L}]DDTYVGGV;[K{I|L}]DDTVYNV;[DV]V{[SA]|[TG]}TYVNV;[TA][{I|L}A]DTYVNV;{NN|[MP]|[D{I|L}]|[EV]}KDYTVNV;[YT]DD{I|L}KVNV;{NN|[MP]|[D{I|L}]|[EV]}KDTYVGGV 6.4736;5.7744;5.6685;5.6094;5.3447;5.2395;5.1859;4.9693;4.9611;4.9102 -;-;-;-;-;-;-;-;-;- 3031 1 2.052 203627.7 1.0 2601 4183 6783 SUDHL4_400M_050219_1,6786 SUDHL4_400M_050219_1,6786,SYEDIKNVV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6787 35.707 225.0 287770.0 25 0 16905.0 + 43207 WAEEGQRVL 9 101 544.2771020923515 0 544.2795898318291 PEAK CID FTMS 0 0 0 6783 110919.21875 0.8152130973740759 -1 0.0039100646972656 4 Unmodified _WAEVPPFLE_ nc|ENSG00000196155|Q58EX7-2|PLEKHG4;ENSG00000196155|ENST00000379344|PLEKHG4;ENST00000563969.5_1_16:67314567-67322708:+|nuORF 36.04419817259434 0.0811646137502998 5 AEEGQ 5 7 31.67 0.0 0.0 2.9148 0.0 0.0 186.0705218510788 383.2421358697876 569.3126577208664 0.0 0.0 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 AEEGQ 2.9148 - 68 + 1 2.052 58468.5 1.0 2602 4183 6783 SUDHL4_400M_050219_1,6787 SUDHL4_400M_050219_1,6787,WAEVPPFLE True False WAEEGQRVL 35.706699 544.279589831829 847809.3125 6783.0 nc|ENSG00000196155|Q58EX7-2|PLEKHG4;;ENSG00000196155|ENST00000379344|PLEKHG4;;ENST00000563969.5_1_16:67314567-67322708:+|nuORF 6.24665101369222 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6788 35.711 201.0 498890.0 25 0 74289.0 -1 0 87 481.2082875144705 480.2010110478705 1 481.2082397341728 MULTI CID FTMS 0 0 0 6783 357086.75 0.6817924087278537 -4 0.0623207092285156 5 5 {M(Oxidation (M))|F}WE 3 -1 + 20.233 0.0 0.0 4.2135 4.2135 76.162 0.0 0.0 0.0 1.0916928908924604 1.0916928908924604 1.0916928908924604 1.0916928908924604 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}WE;[W{M(Oxidation (M))|F}]E;[C(Carbamidomethyl (C))K]{[CA]|SS} 4.2135;3.9862;0.41787 -;-;- 20 + 1 2.052 82752.2 1.0 2603 4183 6783 SUDHL4_400M_050219_1,6788 SUDHL4_400M_050219_1,6788, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6789 35.714 184.0 491980.0 25 0 109220.0 + 2052 APLPPHLPGA 10 98 485.2792959137977 968.5440388943954 2 485.2792541384697 MULTI CID FTMS 0 0 0 6783 250349.796875 0.8725938622984075 -8 0.2417411804199218 6 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 24.67388899826682 0.4143206957119831 5 [PA]{I|L} 3 7 27.676 0.0 0.0 2.8575 0.0 0.0 0.0 684.3468092403516 684.3468092403516 -0.7403126772771884 0.0 -0.7403126772771884 0.0 0 0.5 1.5228787452803376 0.0 0.0 + [PA]{I|L} 2.8575 + + 149 1 2.052 73159.6 1.0 2604 4183 6783 SUDHL4_400M_050219_1,6789 SUDHL4_400M_050219_1,6789,APLPPHLPGA False True False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 6791 35.719 16.0 3767700.0 25 0 555530.0 + 20153 LKPGILPVPK 10 72 531.357428828523 1060.700304723846 2 531.3579589724541 MULTI CID FTMS 0 0 0 6790 3261075.25 0.4322338618853152 6 -0.1985588073730468 1 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 14.95716135407024 0.5965753712453801 5 K{I|L}AP{I|L}VKD{I|L} 9 -1 73.938 0.0 0.0 6.9706 0.0 0.0 0.0 80.05135523013905 80.05135523013905 57.2159417805868 0.0 0.0 0.0 0 1.924742501084005 0.0 0.7302046884880937 0.0 K{I|L}AP{I|L}VKD{I|L} 6.9706 - 131 + 1 2.042 52860.2 1.0 2605 4184 6790 SUDHL4_400M_050219_1,6791 SUDHL4_400M_050219_1,6791,LKPGILPVPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6792 35.732 800.0 198590.0 25 0 14485.0 + 2037 APGTGLGAM 9 97 774.3800683427127 773.3727918761126 1 774.3799316287041 MULTI CID FTMS 0 0 0 6790 192272.0 0.9157468633640098 1 -0.0183029174804687 2 Unmodified _APGTGLGAM_ REV__ENSG00000019144|ENST00000600882|PHLDB1;REV__ENST00000392852.7_1_11:118512280-118516420:+|nuORF;REV__ENST00000524713.5_1_11:118512334-118527530:+|nuORF;REV__ENST00000531987.2_1_11:118512806-118514897:+|nuORF;REV__ENST00000532517.5_1_11:118498004-118527530:+|nuORF 63.562846038646086 0.0241094678104353 5 [QP]SA{I|L}GAM 8 -1 + 58.363 0.0 0.0 7.5466 7.5466 87.276 0.0 0.0 0.0 4.896518287104435 16.40978057358332 4.896518287104435 2.8553184605451847 0 0.805462187404089 0.0 1.798455006504028 0.5649093276264391 [QP]SA{I|L}GAM;[QP]SA{I|L}QM;[PA]GSA{I|L}QM;[NP]TA{I|L}GAM;[QP]S{I|L}AGAM;[Q{I|L}]PSAGAM;[PA]GSA{I|L}GAM;[NP]TA{I|L}QM;[QP]S{I|L}AQM;[Q{I|L}]PSAQM 7.5466;7.1774;6.9134;6.8431;6.7293;6.5693;6.561;6.4739;6.3601;6.2001 -;-;-;-;-;-;-;-;-;- 869 1 2.042 115009.0 0.8700000047683716 2606 4184 6790 SUDHL4_400M_050219_1,6792 SUDHL4_400M_050219_1,6792,APGTGLGAM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6794 35.737 129.0 428340.0 25 0 31622.0 + 33739 SLAESLDQA 9 96 467.2296353255488 932.4447177178976 2 467.2297851443291 MULTI CID FTMS 0 0 0 6793 274962.5 0.732329333798204 -2 0.0584259033203125 1 Unmodified _SLAESLDQA_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 54.773552608820026 0.0299037012502309 5 {[TV]|[{I|L}S]}AES 5 4 33.08 0.0 0.0 3.5477 0.0 0.0 0.0 442.191824001354 442.191824001354 19.26800952323217 0.0 0.0 0.0 0 0.0 2.0 1.0138793319624575 0.0 + {[TV]|[{I|L}S]}AES 3.5477 + + 172 1 2.042 48917.0 1.0 2607 4185 6793 SUDHL4_400M_050219_1,6794 SUDHL4_400M_050219_1,6794,SLAESLDQA True True SLAESLDQA 35.737228 467.229785144329 1577658.625 6793.0 nc|ENSG00000083520|Q9Y2L1-2|DIS3;;ENSG00000083520|ENST00000377767|DIS3 2.687878946463267 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6795 35.747 538.0 215230.0 25 0 19746.0 + -1 TDCPHFPSI 9 154 537.2382841323303 1072.4620153314604 2 537.2390624880791 MULTI CID FTMS 0 0 0 6793 112063.796875 1.0 0 0.0 2 Carbamidomethyl (C) _TDC(Carbamidomethyl (C))PHFPSI_ REV__ENST00000468403.1_1_1:153751119-153751515:+|nuORF 12.531546534597751 0.4974689918368763 5 {I|L}{I|L}C(Carbamidomethyl (C))[PS]GSE 8 -1 25.116 0.0 0.0 2.3419 0.0 0.0 0.0 226.04886401476145 226.04886401476145 9.631157124035424 0.0 0.0 0.0 0 0.0 2.0 1.0 0.0 {I|L}{I|L}C(Carbamidomethyl (C))[PS]GSE 2.3419 - 2342 1 2.042 93394.4 1.0 2608 4185 6793 SUDHL4_400M_050219_1,6795 SUDHL4_400M_050219_1,6795,TDCPHFPSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6797 35.754 295.0 255720.0 25 0 31732.0 + 37678 TLNDREYQL 9 103 576.2886113040271 1150.562669674854 2 576.2875854372978 MULTI CID FTMS 0 0 0 6796 141061.6875 0.2763264096049018 -3 0.0727424621582031 1 Unmodified _TLNDREYQL_ ENSG00000084774|ENST00000264705|CAD 55.50274090549119 0.0285720310785888 5 {[QN]|[E{I|L}]|[KN]}Y[WH]YQ{I|L} 8 5 + 36.335 0.0 0.0 3.158 3.158 76.558 0.0 0.0 0.0 9.419628234359578 18.86046240493748 9.419628234359578 3.2397993759570625 0 0.5242275032520141 1.5228787452803376 0.0 0.0 {[QN]|[E{I|L}]|[KN]}Y[WH]YQ{I|L};{[QN]|[E{I|L}]|[KN]}[WE]HKNVP;{[QN]|[E{I|L}]|[KN]}[HV]P[C(Carbamidomethyl (C))S]NVP;{[QN]|[E{I|L}]|[KN]}Y[WH]Y[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[HV][QT]DNVP;{[QN]|[E{I|L}]|[KN]}[WE]HKGGVP;{[QN]|[E{I|L}]|[KN]}[WE][{M(Oxidation (M))|F}T]{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{[QN]|[E{I|L}]|[KN]}{I|L};{[QN]|[E{I|L}]|[KN]}Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[WT]|[RM]}VP;{[QN]|[E{I|L}]|[KN]}Y[WH][HA]VP 3.158;2.8764;2.6836;2.353;2.2689;2.0761;1.9429;1.9429;1.923;1.923 -;-;-;-;-;-;-;-;-;- 223 1 2.042 62179.5 1.0 2609 4186 6796 SUDHL4_400M_050219_1,6797 SUDHL4_400M_050219_1,6797,TLNDREYQL True True TLNDREYQL 35.754328 576.287585437298 2513504.5 6796.0 ENSG00000084774|ENST00000264705|CAD 5.468010584513347 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6798 35.758 220.0 264350.0 25 0 25095.0 + 29700 QPGPFGPSGPL 11 98 527.2723906822087 0 527.2706176638603 PEAK CID FTMS 0 0 0 6796 123090.6875 0.5255405871124208 13 -0.4423942565917969 2 Unmodified _QPGPFGPSGPL_ REV__ENSG00000187498|ENST00000375820|COL4A1 12.240655878213236 0.4295705806160874 5 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.52108 0.0 0.0 820.3722216946923 82.06696497134999 902.4391866660422 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.52108 + + 11 + 1 2.042 52579.0 1.0 2610 4186 6796 SUDHL4_400M_050219_1,6798 SUDHL4_400M_050219_1,6798,QPGPFGPSGPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6800 35.766 261.0 262040.0 25 0 21021.0 + 40734 VLIDYQRNV 9 84 560.3134241577159 1118.6122953822317 2 560.3112670779228 MULTI CID FTMS 0 0 0 6799 141258.90625 0.0430226873641729 -3 0.04443359375 1 Unmodified _VLIDYQRNV_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF 21.53697664764585 0.2571576504437394 5 V{I|L}{I|L}DYQ 6 3 65.394 0.0 0.0 5.846 0.0 0.0 0.0 384.2019747369751 384.2019747369751 53.61107619295586 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + V{I|L}{I|L}DYQ 5.846 + + 90 + 1 2.042 56315.1 1.0 2611 4187 6799 SUDHL4_400M_050219_1,6800 SUDHL4_400M_050219_1,6800,VLIDYQRNV False True VLIDYQRNV 35.765563 560.311267077923 36056464.0 6799.0 ENST00000492182.5_1_2:61710065-61713073:-|nuORF;;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;;ENSG00000082898|ENST00000401558|XPO1;;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 6.091224034627278 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6801 35.779 800.0 17926.0 25 0 3897.0 -1 0 21 1194.8147725365975 3581.4224882099934 3 1195.816455066204 MULTI CID FTMS 0 0 0 6799 35283.0234375 0.3063752702187678 9 -0.35662841796875 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.042 20753.0 0.4199999868869781 2612 4187 6799 SUDHL4_400M_050219_1,6801 SUDHL4_400M_050219_1,6801, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6802 35.793 800.0 165560.0 25 0 7146.4 + 11878 GLVDEKALAQA 11 177 557.8089282776937 1113.6033036221872 2 557.8085204958916 MULTI CID FTMS 0 0 0 6799 131557.4375 1.0 0 0.0 3 Unmodified _GLVDEKALAQA_ ENSG00000159692|ENST00000382952|CTBP1;ENSG00000175029|ENST00000309035|CTBP2;ENST00000511907.1_1_4:1208072-1210006:-|nuORF;ENST00000513884.1_1_5:97912076-97912961:+|nuORF;nc|ENSG00000159692|Q13363|CTBP1;nc|ENSG00000175029|P56545-3|CTBP2;nc|ENSG00000175029|P56545|CTBP2 46.0223103267499 0.1396584557920269 5 {[VA]|[{I|L}G]}V[TA]DVG{I|L}AQA 12 5 + 50.962 0.0 0.0 4.5763 4.5763 79.774 0.0 0.0 0.0 17.34280191809303 8.244171855527966 8.244171855527966 3.0102999566398125 0 1.2179001828205482 2.0 0.2742275032520141 0.0 {[VA]|[{I|L}G]}V[TA]DVG{I|L}AQA;{[VA]|[{I|L}G]}V[TA]DAVVAQA;{[VA]|[{I|L}G]}V[TA]DR{I|L}AQA;{[VA]|[{I|L}G]}VEEKG{I|L}AQA;{[VA]|[{I|L}G]}VG{[ET]|[MV]}VG{I|L}AQA;{[VA]|[{I|L}G]}V[TA]DVGA{I|L}QA;{[VA]|[{I|L}G]}G{[ES]|[DT]|[{I|L}C]}{I|L}VG{I|L}AQA;{[VA]|[{I|L}G]}V[TA]DVAVAQA;{[VA]|[{I|L}G]}VG{[ET]|[MV]}AVVAQA;{[VA]|[{I|L}G]}KEEVG{I|L}AQA 4.5763;4.306;4.2529;4.2518;4.2179;4.1479;4.0432;4.0357;3.9476;3.9225 -;-;-;-;-;-;-;-;-;- 10972 1 2.042 103649.1 0.6899999976158142 2613 4187 6799 SUDHL4_400M_050219_1,6802 SUDHL4_400M_050219_1,6802,GLVDEKALAQA False True GLVDEKALAQA 35.793259 557.808520495892 561115.375 6799.0 ENST00000511907.1_1_4:1208072-1210006:-|nuORF;;ENST00000513884.1_1_5:97912076-97912961:+|nuORF;;ENSG00000175029|ENST00000309035|CTBP2;;nc|ENSG00000159692|Q13363|CTBP1;;nc|ENSG00000175029|P56545-3|CTBP2;;nc|ENSG00000175029|P56545|CTBP2;;ENSG00000159692|ENST00000382952|CTBP1 5.550456682840983 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6803 35.807 800.0 181320.0 25 0 15546.0 + 45182 YQQELEREL 9 148 604.301150768095 1206.58774860299 2 604.3018676638603 MULTI CID FTMS 0 0 0 6799 112233.40625 0.993555458453794 -2 0.0261306762695312 4 Unmodified _YQQELEREL_ ENSG00000154723|ENST00000284971|ATP5PF;ENST00000486002.1_1_21:27097498-27107174:-|nuORF;nc|ENSG00000154723|P18859-2|ATP5PF 60.07390631473393 0.0260411565414776 5 E{I|L}EQSW 6 6 53.287 0.0 0.0 4.4164 0.0 0.0 416.2399769513688 0.0 416.2399769513688 0.0 27.86758077242795 0.0 0.0 0 0.8321296499783922 0.0 1.2302046884880935 0.4247425010840047 E{I|L}EQSW 4.4164 - 840 1 2.042 105320.8 0.6499999761581421 2614 4187 6799 SUDHL4_400M_050219_1,6803 SUDHL4_400M_050219_1,6803,YQQELEREL True True YQQELEREL 35.80709 604.30186766386 751575.0 6799.0 ENST00000486002.1_1_21:27097498-27107174:-|nuORF;;ENSG00000154723|ENST00000284971|ATP5PF;;nc|ENSG00000154723|P18859-2|ATP5PF 5.714240550994873 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6804 35.815 425.0 384270.0 25 0 23951.0 + 40819 VLMEKPDVV 9 161 515.2870862752346 1028.5596196172692 2 515.2896606326103 MULTI CID FTMS 0 0 0 6799 110934.34375 0.4200799926063818 -3 0.04443359375 5 Unmodified _VLMEKPDVV_ ENSG00000136271|ENST00000258772|DDX56;nc|ENSG00000136271|Q9NY93-2|DDX56 49.55428908609986 0.0413471690215031 5 V{I|L}MEK{I|L}PEA 9 4 + 73.094 0.0 0.0 7.1064 7.1064 83.844 0.0 0.0 0.0 55.10930928031691 13.823193322791752 13.823193322791752 0.7572071393811797 0 1.0682503180159344 2.0 0.9258337024346172 0.0 V{I|L}MEK{I|L}PEA;V{I|L}MS{[VA]|[{I|L}G]}{I|L}PEA;V{I|L}M{[VA]|[{I|L}G]}S{I|L}PEA;V{I|L}MEKPDVV;V{I|L}MS{[VA]|[{I|L}G]}PDVV;V{I|L}M{[VA]|[{I|L}G]}SPDVV;V{I|L}MEK[DV]PV;V{I|L}MS{[VA]|[{I|L}G]}[DV]PV;V{I|L}M{[VA]|[{I|L}G]}S[DV]PV;V{I|L}MS[{I|L}P]AEAV 7.1064;7.0328;7.0067;5.6701;5.5965;5.5704;5.0984;5.0248;4.9987;4.3728 -;-;-;+;-;-;-;-;-;- + 4712 + 1 2.042 127827.8 1.0 2615 4187 6799 SUDHL4_400M_050219_1,6804 SUDHL4_400M_050219_1,6804,VLMEKPDVV True True VLMEKPDVV 35.814671 515.28966063261 1555365.125 6799.0 nc|ENSG00000136271|Q9NY93-2|DDX56;;ENSG00000136271|ENST00000258772|DDX56 4.3275705973307295 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6805 35.828 800.0 201380.0 25 0 13952.0 28839 QAFFKQNN 8 175 498.7486235552238 0 498.7486450076103 PEAK CID FTMS 0 0 0 6799 82303.4375 0.6404597616456473 13 -0.4947319030761719 6 Unmodified _QAFFKQNN_ ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23 23.1484247019978 0.3584660196589264 5 {M(Oxidation (M))|F}TNAM{I|L} 6 7 20.979 0.0 0.0 2.1074 0.0 0.0 199.09512518725893 116.0511721246703 315.14629731192923 0.0 0.0 0.0 0.0 0 1.079689690656103 0.0 0.0 0.3807196863200844 {M(Oxidation (M))|F}TNAM{I|L} 2.1074 - 261 + 1 2.042 124262.4 0.5199999809265137 2616 4187 6799 SUDHL4_400M_050219_1,6805 SUDHL4_400M_050219_1,6805,QAFFKQNN False True AQFPSSGRF 35.828486 498.74864500761 1814220.125 6799.0 nc|ENSG00000176102|Q12996-2|CSTF3;;ENSG00000176102|ENST00000323959|CSTF3;;ENST00000526480.1_1_11:33157665-33182871:-|nuORF 3.111212412516276 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6806 35.843 800.0 161880.0 25 0 22972.0 + 45255 YSDDTLKQL 9 158 541.7731304889396 1081.5317080446791 2 541.7721435427666 MULTI CID FTMS 0 0 0 6799 103384.078125 0.8143176620895678 -1 0.0118141174316406 7 Unmodified _YSDDTLKQL_ ENSG00000132199|ENST00000647584|ENOSF1;ENST00000578651.5_1_18:683014-712587:-|nuORF;ENST00000585004.5_1_18:688572-706535:-|nuORF;nc|ENSG00000132199|Q7L5Y1-2|ENOSF1;nc|ENSG00000132199|Q7L5Y1-4|ENOSF1;nc|ENSG00000132199|Q7L5Y1-5|ENOSF1;nc|ENSG00000132199|Q7L5Y1-6|ENOSF1 140.63315402491853 0.0246263635878117 5 YSDDT{I|L}KQ{I|L} 9 0 + 106.71 0.0 0.0 9.8666 9.8666 97.184 0.0 0.0 0.0 63.78189926746487 19.15083033826945 19.15083033826945 12.703037561203844 0 2.079689690656103 2.0 0.3807196863200844 1.7034021960761263 + + YSDDT{I|L}KQ{I|L};YSDDT{I|L}K[AG]{I|L};YSDDT[RK]VV;YS[W{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}Q{I|L};YSD[{M(Oxidation (M))|F}V]{[QN]|[E{I|L}]|[KN]}P{I|L};YSD[{M(Oxidation (M))|F}V][KG]GP{I|L};{[{M(Oxidation (M))|F}C]|[YS]}DDT{I|L}KQ{I|L};YS[{M(Oxidation (M))|F}V]D{[QN]|[E{I|L}]|[KN]}P{I|L};YSD[{M(Oxidation (M))|F}V][KQ][VP];{[ES]|[DT]|[{I|L}C]}DS{I|L}YKQ{I|L} 9.8666;8.692;5.3554;5.291;4.9381;4.6174;4.0311;3.9793;3.9088;3.846 +;-;-;-;-;-;+;-;-;- + 1075 + 1 2.042 99302.3 0.6000000238418579 2617 4187 6799 SUDHL4_400M_050219_1,6806 SUDHL4_400M_050219_1,6806,YSDDTLKQL True True YSDDTLKQL 35.843492 541.772143542767 725800.3125 6799.0 nc|ENSG00000132199|Q7L5Y1-4|ENOSF1;;ENST00000578651.5_1_18:683014-712587:-|nuORF;;nc|ENSG00000132199|Q7L5Y1-2|ENOSF1;;ENST00000585004.5_1_18:688572-706535:-|nuORF;;nc|ENSG00000132199|Q7L5Y1-6|ENOSF1;;ENSG00000132199|ENST00000647584|ENOSF1;;nc|ENSG00000132199|Q7L5Y1-5|ENOSF1 8.719071388244629 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6808 35.848 35.0 2153800.0 25 0 418660.0 + 1301 AIVDKVPSV 9 81 464.27911546026814 926.5436779873364 2 464.2791625857353 MULTI CID FTMS 0 0 0 6807 1706839.75 0.3665735077344715 -8 0.2256317138671875 1 Unmodified _AIVDKVPSV_ ENSG00000181789|ENST00000314797|COPG1 31.26834338654808 0.1333407332142048 5 [{I|L}A]VDKVPSV 9 0 + 62.404 0.0 0.0 6.7352 6.7352 95.415 0.0 0.0 0.0 30.58168522831444 11.725534297491294 11.725534297491294 31.55532931377621 0 0.8494850021680094 2.0 0.2059771852360797 0.0 + + [{I|L}A]VDKVPSV;[{I|L}A]VDK[{I|L}T][PA] 6.7352;3.3295 +;- + 163 + 1 2.046 63184.1 1.0 2618 4188 6807 SUDHL4_400M_050219_1,6808 SUDHL4_400M_050219_1,6808,AIVDKVPSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6809 35.855 378.0 200790.0 25 0 32200.0 + 8316 ERGFEKLT 8 104 490.2641889880349 978.5138250428698 2 490.2654601931572 MULTI CID FTMS 0 0 0 6807 39575.24609375 0.0596832994498557 10 -0.3185195922851562 2 Unmodified _ERGFEKLT_ REV__nc|ENSG00000152214|Q99578-2|RIT2 10.823927491677226 0.7510103885582552 5 {NN|[MP]|[D{I|L}]|[EV]}G 3 -1 16.898 0.0 0.0 1.7269 0.0 0.0 0.0 690.3508358738322 690.3508358738322 -1.518637558036669 0.0 -1.518637558036669 0.0 0 0.0 1.0969100130080565 0.3252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}G 1.7269 - 123 1 2.046 61820.9 1.0 2619 4188 6807 SUDHL4_400M_050219_1,6809 SUDHL4_400M_050219_1,6809,ERGFEKLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6810 35.856 19.0 3411300.0 25 0 553290.0 + 17374 KMDPIISRV 9 68 529.8047854127882 1057.5950178923763 2 529.8054687380791 MULTI CID FTMS 0 0 0 6807 2608785.25 0.8141583619994867 -2 0.0970039367675781 3 Unmodified _KMDPIISRV_ ENSG00000159388|ENST00000290551|BTG2 34.93206674587334 0.1032771302489716 5 KMDV 4 5 43.928 0.0 0.0 4.1536 0.0 0.0 0.0 581.3424166315061 581.3424166315061 17.730012720637376 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 KMDV 4.1536 - 46 + 1 2.046 54456.5 1.0 2620 4188 6807 SUDHL4_400M_050219_1,6810 SUDHL4_400M_050219_1,6810,KMDPIISRV True True KMDPIISRV 35.856279 529.805468738079 21951843.0 6807.0 ENSG00000159388|ENST00000290551|BTG2 6.72670332590739 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6811 35.858 94.0 753380.0 25 0 96520.0 + 39109 TWSPILRVS 9 97 353.5391529283679 1057.5956293853037 3 353.5390807986259 MULTI CID FTMS 0 0 0 6807 417140.8125 0.911016175861771 -2 0.0970039367675781 4 Unmodified _TWSPILRVS_ REV__ENSG00000004660|ENST00000348335|CAMKK1;REV__nc|ENSG00000004660|Q8N5S9-2|CAMKK1 13.042465956692816 0.4836390050082244 5 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DP{I|L}{I|L}VSR 9 -1 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DP{I|L} + + 27.782 7.7469 1.3258 2.6269 2.6269 53.59 0.0 0.0 0.0 0.0 17.69329305476227 0.0 0.0 0 0.5 0.0 0.5467716608392861 0.0 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DP{I|L}{I|L}VSR 2.6269 - 76 + 1 2.046 66999.1 1.0 2621 4188 6807 SUDHL4_400M_050219_1,6811 SUDHL4_400M_050219_1,6811,TWSPILRVS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6812 35.862 214.0 404290.0 25 0 31985.0 + 1787 ALSEKLARL 9 91 500.8110865541057 999.6076201750114 2 500.8106872439384 MULTI CID FTMS 0 0 0 6807 281337.96875 0.6227436061462454 -2 0.0970039367675781 5 Unmodified _ALSEKLARL_ ENSG00000152240|ENST00000282058|HAUS1;nc|ENSG00000152240|Q96CS2-2|HAUS1 49.55428908609986 0.0413471690215031 5 {I|L}ASEK{I|L}AR{I|L} 9 2 + 94.792 0.0 0.0 9.4829 9.4829 92.973 0.0 0.0 0.0 77.57306283537218 14.582655352276674 14.582655352276674 7.257724967479859 0 1.274227503252014 2.0 0.4247425010840047 0.0 {I|L}ASEK{I|L}AR{I|L};A{I|L}SEK{I|L}AR{I|L};{I|L}ASE{I|L}KAR{I|L};A{I|L}SE{I|L}KAR{I|L} 9.4829;8.7568;8.5283;7.8022 -;+;-;- + 183 + 1 2.046 69371.0 1.0 2622 4188 6807 SUDHL4_400M_050219_1,6812 SUDHL4_400M_050219_1,6812,ALSEKLARL True True ALSEKLARL 35.862383 500.810687243938 2129994.25 6807.0 nc|ENSG00000152240|Q96CS2-2|HAUS1;;ENSG00000152240|ENST00000282058|HAUS1 5.401253541310628 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6813 35.864 95.0 532810.0 25 0 29910.0 + 11904 GLWRTTPEA 9 80 515.7698082123181 1029.5250634914362 2 515.7698242068291 MULTI CID FTMS 0 0 0 6807 217225.890625 0.220921563187179 -4 0.1296234130859375 6 Unmodified _GLWRTTPEA_ ENSG00000104635|ENST00000381237|SLC39A14;nc|ENSG00000104635|Q15043-2|SLC39A14;nc|ENSG00000104635|Q15043-3|SLC39A14 35.61225514009592 0.0995432151795903 5 GWWVT[EP]A 8 3 32.172 0.0 0.0 3.1249 0.0 0.0 85.08986098457187 0.0 85.08986098457187 0.0 10.745397123361968 0.0 0.0 0 1.274227503252014 0.0 0.3054621874040891 0.0 GWWVT[EP]A 3.1249 - 292 1 2.046 44948.0 1.0 2623 4188 6807 SUDHL4_400M_050219_1,6813 SUDHL4_400M_050219_1,6813,GLWRTTPEA True True GLWRTTPEA 35.864456 515.769824206829 5653568.0 6807.0 ENSG00000104635|ENST00000381237|SLC39A14;;nc|ENSG00000104635|Q15043-3|SLC39A14;;nc|ENSG00000104635|Q15043-2|SLC39A14 5.412230650583903 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6814 35.87 331.0 169050.0 25 0 12934.0 + 11801 GLMDTVKKV 9 111 495.7864760622246 989.5583991912492 2 495.7867614626884 MULTI CID FTMS 0 0 0 6807 95676.453125 1.0 0 0.0 7 Unmodified _GLMDTVKKV_ ENSG00000162419|ENST00000373816|GMEB1;nc|ENSG00000162419|Q9Y692|GMEB1 17.11289562659939 0.3734572693229295 5 {[VA]|[{I|L}G]}MD{[TV]|[{I|L}S]}KKV 9 0 + 52.91 0.0 0.0 5.3468 5.3468 91.42 0.0 0.0 0.0 41.127197683089406 10.597718523607966 10.597718523607966 26.989700043360187 0 0.3494850021680094 2.0 0.0 0.2302046884880938 + + {[VA]|[{I|L}G]}MD{[TV]|[{I|L}S]}KKV;{[VA]|[{I|L}G]}[WR][MT]KV;{[VA]|[{I|L}G]}[WR][R{M(Oxidation (M))|F}]GV;{[VA]|[{I|L}G]}[WR][YK][PA] 5.3468;2.6194;1.2962;0.69235 +;-;-;- + 196 + 1 2.046 46160.2 1.0 2624 4188 6807 SUDHL4_400M_050219_1,6814 SUDHL4_400M_050219_1,6814,GLMDTVKKV False True GLMDTVKKV 35.870454 495.786761462688 460042.21875 6807.0 nc|ENSG00000162419|Q9Y692|GMEB1;;ENSG00000162419|ENST00000373816|GMEB1 6.313051859537761 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6816 35.876 177.0 395680.0 25 0 51360.0 + 39225 TYYGSFVTR 9 80 547.26924479431 1092.52393665542 2 547.2695800662041 MULTI CID FTMS 0 0 0 6815 192218.859375 0.0405338128116245 13 -0.5474929809570312 1 Unmodified _TYYGSFVTR_ ENSG00000147677|ENST00000521861|EIF3H;ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 13.614867670302877 0.4681447649821485 5 [YT]YGS{M(Oxidation (M))|F}{[TV]|[{I|L}S]}R 9 0 + 45.639 0.0 0.0 4.1774 4.1774 86.814 0.0 0.0 0.0 34.38043486046329 0.5014445271442725 0.5014445271442725 16.197887582883936 0 0.4247425010840047 2.0 0.0 0.0 + + [YT]YGS{M(Oxidation (M))|F}{[TV]|[{I|L}S]}R;[YT]Y[YQ]{[TV]|[{I|L}S]}R 4.1774;2.6948 +;- + 39 + 1 2.046 56592.7 1.0 2625 4189 6815 SUDHL4_400M_050219_1,6816 SUDHL4_400M_050219_1,6816,TYYGSFVTR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6817 35.89 800.0 228150.0 25 0 32828.0 -1 0 103 674.6917060466122 2021.0532887400368 3 674.6920043826103 MULTI CID FTMS 0 0 0 6815 142701.703125 0.7921831998934146 -4 0.1382789611816406 2 5 KPTGAR[PS][{I|L}A] 10 -1 47.056 0.0 0.0 2.3283 0.0 0.0 1024.4813949918887 0.0 1024.4813949918887 0.0 26.84496837255775 0.0 0.0 0 1.0 0.0 1.110924374808178 0.3807196863200844 KPTGAR[PS][{I|L}A] 2.3283 - 920 + 1 2.046 140331.7 0.75 2626 4189 6815 SUDHL4_400M_050219_1,6817 SUDHL4_400M_050219_1,6817, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6818 35.893 111.0 843090.0 25 0 89199.0 + 30327 RAFDQGADAIY 11 72 613.7936597841332 1225.5727666350665 2 613.7939330935478 MULTI CID FTMS 0 0 0 6815 438142.65625 0.1753759498564076 -4 0.1382789611816406 3 Unmodified _RAFDQGADAIY_ ENSG00000184076|ENST00000330029|UQCR10;nc|ENSG00000184076|Q9UDW1-2|UQCR10 39.21299971606389 0.2245192836502623 5 DQGADA{I|L}Y 8 3 64.916 0.0 0.0 5.2968 0.0 0.0 374.2064991681656 0.0 374.2064991681656 0.0 47.925872416043234 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.75 + DQGADA{I|L}Y 5.2968 + + 755 1 2.046 76756.0 1.0 2627 4189 6815 SUDHL4_400M_050219_1,6818 SUDHL4_400M_050219_1,6818,RAFDQGADAIY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6819 35.894 65.0 565360.0 25 0 32321.0 + 12167 GQPDISRPF 9 71 508.7616100309671 1015.508667128734 2 508.7617980837822 MULTI CID FTMS 0 0 0 6815 420787.5625 1.0 0 0.0 4 Unmodified _GQPDISRPF_ ENSG00000102786|ENST00000311234|INTS6;ENST00000504674.1_1_5:39720798-39721572:-|nuORF;nc|ENSG00000102786|Q9UL03-3|INTS6 11.494710602746466 0.5255349189887087 5 {[QG]|[NA]}PD{I|L}A 6 4 33.416 0.0 0.0 3.2906 0.0 0.0 0.0 431.2167452447876 431.2167452447876 15.925230508543034 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[QG]|[NA]}PD{I|L}A 3.2906 - 36 + 1 2.046 36431.6 1.0 2628 4189 6815 SUDHL4_400M_050219_1,6819 SUDHL4_400M_050219_1,6819,GQPDISRPF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6820 35.896 113.0 537710.0 25 0 36413.0 + 26072 NMYGKVVTV 9 90 505.7704348995048 1009.5263168658096 2 505.7706786990166 MULTI CID FTMS 0 0 0 6815 310242.21875 0.7437997402329632 -1 0.0269584655761718 5 Unmodified _NMYGKVVTV_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 29.081581746732265 0.1611639662936252 5 [MN]Y 3 6 32.364 0.0 0.0 3.2058 0.0 0.0 0.0 598.3568819635374 598.3568819635374 13.903470859664534 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.0 + [MN]Y 3.2058 + + 202 + 1 2.046 50617.4 1.0 2629 4189 6815 SUDHL4_400M_050219_1,6820 SUDHL4_400M_050219_1,6820,NMYGKVVTV False True NMYGKVVTV 35.896441 505.770678699017 2253464.75 6815.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 2.9994171460469565 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6821 35.91 800.0 53141.0 25 0 7298.6 29956 QSPVTKQWQEK 11 89 679.8570542874494 1357.699555641699 2 679.8565551638603 MULTI CID FTMS 0 0 0 6815 90757.296875 1.0 0 0.0 6 Unmodified _QSPVTKQWQEK_ ENSG00000164161|ENST00000296575|HHIP;ENST00000512791.1_1_4:145636196-145636656:+|nuORF 4.189502756095605 0.855381588458882 5 S{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 4 10 11.414 0.0 0.0 0.84072 0.0 0.0 845.4381553504862 0.0 845.4381553504862 0.0 0.9298626587642644 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 S{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 0.84072 - 100 + 1 2.046 43651.7 0.6000000238418579 2630 4189 6815 SUDHL4_400M_050219_1,6821 SUDHL4_400M_050219_1,6821,QSPVTKQWQEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6822 35.912 93.0 619640.0 25 0 106250.0 -1 0 84 459.28031058944345 458.27303412284346 1 459.2801391482353 MULTI CID FTMS 0 0 0 6815 256851.234375 0.2233868266546994 7 -0.2444801330566406 7 5 SV 2 -1 13.857 0.0 0.0 3.0237 0.0 0.0 254.1615361753809 0.0 254.1615361753809 0.0 9.419628234359578 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 SV 3.0237 - 22 + 1 2.046 50114.7 1.0 2631 4189 6815 SUDHL4_400M_050219_1,6822 SUDHL4_400M_050219_1,6822, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6824 35.917 87.0 514100.0 25 0 40113.0 -1 0 56 874.9054764860379 1747.7964000388756 2 875.4034301638603 MULTI CID FTMS 0 0 0 6823 444065.34375 0.1742132989731166 23 -1.039703369140625 1 5 DAN{I|L}[DP]{[QN]|[E{I|L}]|[KN]} 8 -1 41.203 0.0 0.0 2.3574 0.0 0.0 862.4292847210525 0.0 862.4292847210525 0.0 23.970996953088388 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.805462187404089 DAN{I|L}[DP]{[QN]|[E{I|L}]|[KN]} 2.3574 - 90 1 2.046 37064.6 1.0 2632 4190 6823 SUDHL4_400M_050219_1,6824 SUDHL4_400M_050219_1,6824, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6825 35.922 253.0 239550.0 25 0 17252.0 + -1 SLLEAGLMEY 10 116 571.2781070710178 0 571.2815429568291 PEAK CID FTMS 0 0 0 6823 59419.4609375 0.2399493391660491 12 -0.5055160522460938 2 Oxidation (M) _SLLEAGLM(Oxidation (M))EY_ REV__ENSG00000117408|ENST00000372343|IPO13 10.073929032068715 0.3742530088597855 5 W 1 -1 4.6041 0.0 0.0 0.40368 0.0 0.0 588.2426472781094 363.1976107233032 951.4402580014124 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.40368 - 135 + 1 2.046 51915.8 1.0 2633 4190 6823 SUDHL4_400M_050219_1,6825 SUDHL4_400M_050219_1,6825,SLLEAGLMEY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6826 35.925 146.0 552200.0 25 0 102530.0 + 1808 ALTAAATLSV 10 97 459.26771329829694 916.520873663394 2 459.2679931521416 MULTI CID FTMS 0 0 0 6823 159663.625 1.0 0 0.0 3 Unmodified _ALTAAATLSV_ ENSG00000100084|ENST00000263208|HIRA;ENST00000509549.5_1_22:19341546-19435194:-|nuORF 32.30548876998284 0.2428506522065767 5 [VS]Q{I|L}T 5 9 15.828 0.0 0.0 1.7269 0.0 0.0 0.0 385.2068837554439 385.2068837554439 2.7288865613972426 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.0 [VS]Q{I|L}T 1.7269 - 193 1 2.046 64252.6 1.0 2634 4190 6823 SUDHL4_400M_050219_1,6826 SUDHL4_400M_050219_1,6826,ALTAAATLSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6827 35.936 661.0 200550.0 25 0 15416.0 + 42936 VVSEGVPRI 9 143 478.2819229905009 954.5492930478018 2 478.2817260622978 MULTI CID FTMS 0 0 0 6823 118493.9375 0.6935669290661665 -6 0.1985588073730468 4 Unmodified _VVSEGVPRI_ ENSG00000186222|ENST00000320776|BLOC1S4 19.256988751693697 0.3154191944385105 5 VVSER 5 4 41.95 0.0 0.0 4.3948 0.0 0.0 0.0 381.2262362115844 381.2262362115844 27.34636880228201 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VVSER 4.3948 - 292 + 1 2.046 105085.8 1.0 2635 4190 6823 SUDHL4_400M_050219_1,6827 SUDHL4_400M_050219_1,6827,VVSEGVPRI False True VVSEGVPRI 35.936229 478.281726062298 1451863.125 6823.0 ENSG00000186222|ENST00000320776|BLOC1S4 3.3611936569213867 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6828 35.95 800.0 186940.0 25 0 5665.4 -1 0 115 845.7130937313958 2534.117451794388 3 846.0484496951103 MULTI CID FTMS 0 0 0 6823 139939.765625 0.7415572433428389 -2 0.0689353942871093 5 5 D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NEDAPQEESPW{I|L}SGK[EP]GR 22 -1 + 122.06 0.0 0.0 4.8165 4.8165 58.677 0.0 0.0 0.0 66.36391664092645 13.778460166621088 13.778460166621088 0.0 0 0.0 0.0 0.8494850021680094 0.8494850021680094 D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NEDAPQEESPW{I|L}SGK[EP]GR;D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NEDAPKEESPW{I|L}SGK[EP]GR;D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NEWPQEESPW{I|L}SGK[EP]GR;D{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}NEWPKEESPW{I|L}SGK[EP]GR;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[KT]GS{I|L}WPSEEQPADEN[YN]N;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[KT]GS{I|L}WPSEEQPWEN[YN]N;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[KT]GS{I|L}WPSEEKPADEP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}N;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[KT]GS{I|L}WPSEEQPADEP{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}N;{[QV]|[N{I|L}]|[RA]|[KV]}E[KT]GS{I|L}WPSEEQPADEN[YN]N;{[QS]|[NT]}T[R{I|L}]GS{I|L}WPSEEQPADEN[YN]N 4.8165;4.8165;4.5487;4.5487;4.0917;3.8238;3.8053;3.8053;3.775;3.6091 -;-;-;-;-;-;-;-;-;- 5084 + 1 2.046 106294.5 0.6800000071525574 2636 4190 6823 SUDHL4_400M_050219_1,6828 SUDHL4_400M_050219_1,6828, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6829 35.956 312.0 252570.0 25 0 29122.0 + 30715 RGGAGRKP 8 128 399.7380305880737 0 399.7379943728447 PEAK CID FTMS 0 0 0 6823 124748.859375 0.7159228930364294 -7 0.2386817932128906 6 Unmodified _RGGAGRKP_ REV__ENST00000556552.1_1_14:94594803-94595124:-|nuORF 2.577480529830294 0.5910327097116076 5 R 1 -1 4.732 0.0 0.0 0.59338 0.0 0.0 399.2356304126724 239.0929354303344 638.3285658430068 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 R 0.59338 + + 2 + 1 2.046 65099.0 1.0 2637 4190 6823 SUDHL4_400M_050219_1,6829 SUDHL4_400M_050219_1,6829,RGGAGRKP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6830 35.97 800.0 163300.0 25 0 9590.6 -1 TIGLMCSQ 8 128 909.4154616425292 908.4081851759292 1 909.4174072146416 MULTI CID FTMS 0 0 0 6823 113181.1640625 0.4717444489424622 -4 0.1659393310546875 7 Carbamidomethyl (C) _TIGLMC(Carbamidomethyl (C))SQ_ ENST00000374875.5_1_10:33468482-33468866:-|nuORF 13.50788311687929 0.7113601687236069 5 [NP]{I|L}NAT{I|L}P 8 -1 38.235 0.0 0.0 4.209 0.0 0.0 0.0 84.95173921329175 84.95173921329175 30.787377424408064 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.7302046884880937 0.7134679910804405 [NP]{I|L}NAT{I|L}P 4.209 - 370 1 2.046 89125.6 0.6200000047683716 2638 4190 6823 SUDHL4_400M_050219_1,6830 SUDHL4_400M_050219_1,6830,TIGLMCSQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6831 35.983 800.0 99886.0 25 0 5351.6 + 30160 QVQGRDWEQVQ 11 110 686.8338769503976 1371.653200967595 2 686.8342773318291 MULTI CID FTMS 0 0 0 6823 111872.359375 1.0 0 0.0 8 Unmodified _QVQGRDWEQVQ_ REV__ENSG00000153531|ENST00000612156|ADPRHL1 32.037481411007896 0.3399527776090619 5 {[QV]|[N{I|L}]|[RA]|[KV]}NA 4 -1 46.657 0.0 0.0 3.4015 0.0 0.0 0.0 956.421028686598 956.421028686598 12.276296993281406 0.0 0.0 0.0 0 1.5 2.0 0.0 0.75 {[QV]|[N{I|L}]|[RA]|[KV]}NA 3.4015 - 626 1 2.046 60919.0 0.6499999761581421 2639 4190 6823 SUDHL4_400M_050219_1,6831 SUDHL4_400M_050219_1,6831,QVQGRDWEQVQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6833 35.988 112.0 358370.0 25 0 13708.0 + -1 KLNDTYVNV 9 91 533.7740002889498 1065.5334476446994 2 533.7747070193291 MULTI CID FTMS 0 0 0 6832 265348.4375 0.1956270534602821 2 -0.04730224609375 1 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FLMAVNV_ ENSG00000166881|ENST00000300128|NEMP1 19.438996006549623 0.310492472477042 5 DTYVNV 6 -1 34.64 0.0 0.0 3.251 0.0 0.0 356.20564467597814 0.0 356.20564467597814 0.0 18.44212497064703 0.0 0.0 0 0.718765315847925 0.0 0.7302046884880937 0.0 DTYVNV 3.251 - 70 1 2.046 35839.0 1.0 2640 4191 6832 SUDHL4_400M_050219_1,6833 SUDHL4_400M_050219_1,6833,ICFLMAVNV False False KLNDTYVNV 35.988276 533.774707019329 0.0 6832.0 ENSG00000166881|ENST00000300128|NEMP1 4.414353688557942 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6834 35.992 210.0 300650.0 25 0 18743.0 -1 0 101 481.2082875144705 480.2010110478705 1 481.2081481814384 MULTI CID FTMS 0 0 0 6832 96291.8984375 0.183851922191683 4 -0.1231880187988281 2 5 [W{M(Oxidation (M))|F}]E 3 -1 + 17.447 0.0 0.0 3.6333 3.6333 73.896 0.0 0.0 0.0 0.4845500650402812 0.4845500650402812 0.4845500650402812 0.4845500650402812 0 0.0 0.0 0.0 0.0 [W{M(Oxidation (M))|F}]E;{M(Oxidation (M))|F}WE 3.6333;3.5324 -;- 23 1 2.046 56396.0 1.0 2641 4191 6832 SUDHL4_400M_050219_1,6834 SUDHL4_400M_050219_1,6834, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6836 35.998 187.0 512880.0 25 0 67026.0 + 43594 YAEVGRVL 8 90 453.7558250951512 0 453.7559997439384 PEAK CID FTMS 0 0 0 6835 299296.78125 0.7337050773556364 -2 0.0799522399902343 1 Unmodified _YAEVGRVL_ ENSG00000131503|ENST00000360839|ANKHD1;ENSG00000132466|ENST00000358602|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17 42.09456458481378 0.1274309217205264 5 AEV 3 5 30.93 0.0 0.0 3.4158 0.0 0.0 163.06227277478803 440.2631377239349 603.3254104987229 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.0 + AEV 3.4158 + + 27 + 1 2.046 77847.4 1.0 2642 4192 6835 SUDHL4_400M_050219_1,6836 SUDHL4_400M_050219_1,6836,YAEVGRVL True True YAEVGRVL 35.998391 453.755999743938 2017434.875 6835.0 nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;;nc|ENSG00000132466|O75179-7|ANKRD17;;nc|ENSG00000132466|O75179-6|ANKRD17;;ENSG00000131503|ENST00000360839|ANKHD1;;nc|ENSG00000132466|O75179-2|ANKRD17;;ENSG00000132466|ENST00000358602|ANKRD17 0.5833472882707914 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6837 36.002 165.0 355160.0 25 0 30556.0 + 37381 TLAAELSGAI 10 79 473.2662852075477 944.5180174818952 2 473.2655517458916 MULTI CID FTMS 0 0 0 6835 238027.625 0.9569216628905982 -1 0.0088844299316406 2 Unmodified _TLAAELSGAI_ REV__ENSG00000135775|ENST00000366669|COG2;REV__nc|ENSG00000135775|Q14746-2|COG2 25.399314129420983 0.3980215340001851 5 [{I|L}T]AA{[SA]|[TG]}EVA{I|L} 10 -1 + 24.709 0.0 0.0 2.6161 2.6161 71.982 0.0 0.0 0.0 1.7287862987019975 9.224860434114714 1.7287862987019975 0.3778856088939974 0 0.8182503180159344 1.6989700043360187 0.3807196863200844 0.0 [{I|L}T]AA{[SA]|[TG]}EVA{I|L};[{I|L}T]AAE{[SA]|[TG]}VA{I|L};[W{I|L}][KS]EVA{I|L};[{I|L}A]{[QG]|[NA]}HHVA{I|L};[{I|L}A][TA]{[SA]|[TG]}EVA{I|L};[{I|L}A][TA]E{[SA]|[TG]}VA{I|L};[W{I|L}][VS]{[SA]|[TG]}VA{I|L};[KS][PG]HHVA{I|L};[{I|L}A][RN][C(Carbamidomethyl (C))K]A{I|L} 2.6161;2.5761;2.2489;1.8001;1.7922;1.7522;1.2283;1.0419;0.51684 -;-;-;-;-;-;-;-;- 195 1 2.046 50455.7 1.0 2643 4192 6835 SUDHL4_400M_050219_1,6837 SUDHL4_400M_050219_1,6837,TLAAELSGAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6838 36.003 65.0 1359100.0 25 0 146880.0 + 20154 LKPGILPVPK 10 102 531.357428828523 1060.700304723846 2 531.3578369021416 MULTI CID FTMS 0 0 0 6835 938280.1875 0.1243628060939724 14 -0.6998710632324219 3 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 23.80106514851385 0.4339316747945569 5 K{I|L}AP{I|L}VKD{I|L} 9 -1 65.416 0.0 0.0 6.1673 0.0 0.0 0.0 80.05121790103749 80.05121790103749 45.4588273628242 0.0 0.0 0.0 0 1.5 0.0 1.110924374808178 0.0 K{I|L}AP{I|L}VKD{I|L} 6.1673 - 275 + 1 2.046 70840.3 1.0 2644 4192 6835 SUDHL4_400M_050219_1,6838 SUDHL4_400M_050219_1,6838,LKPGILPVPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6839 36.007 218.0 288390.0 25 0 29327.0 + 2942 AVHEDIVAV 9 80 476.7585826451809 951.502612357162 2 476.7588073611259 MULTI CID FTMS 0 0 0 6835 227549.984375 1.0 0 0.0 4 Unmodified _AVHEDIVAV_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 36.04419817259434 0.0971720506436186 5 {[VA]|[{I|L}G]}HED{I|L}VAV 9 0 + 42.073 0.0 0.0 4.4218 4.4218 87.988 0.0 0.0 0.0 15.47446936771074 26.5887975618773 15.47446936771074 19.43820026016112 0 0.8182503180159344 1.3010299956639813 0.0 0.0 + + {[VA]|[{I|L}G]}HED{I|L}VAV;{[VA]|[{I|L}G]}H[PA][C(Carbamidomethyl (C))K]AV;[YV]{[NV]|[RG]}[C(Carbamidomethyl (C))K]AV 4.4218;2.3789;1.2189 +;-;- + 225 1 2.046 53829.5 1.0 2645 4192 6835 SUDHL4_400M_050219_1,6839 SUDHL4_400M_050219_1,6839,AVHEDIVAV True True AVHEDIVAV 36.007328 476.758807361126 1142468.125 6835.0 nc|ENSG00000083520|Q9Y2L1-2|DIS3;;ENSG00000083520|ENST00000377767|DIS3 7.379727840423584 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6840 36.012 229.0 366020.0 25 0 43334.0 + + 16087 AQQVVLSSY 9 110 497.2839655384513 992.5533781437026 2 497.2843200564384 MULTI CID FTMS 0 0 0 6835 153933.015625 0.282284493063943 -3 0.1219291687011718 5 Unmodified _ITQTASFLL_ ENSG00000116455|ENST00000235090|WDR77 20.453626601364224 0.2830276176381075 5 [{I|L}T][QT]{I|L}A 6 -1 23.913 0.0 0.0 2.4093 0.0 0.0 0.0 362.17005229825264 362.17005229825264 0.7846345946782662 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 [{I|L}T][QT]{I|L}A 2.4093 - 517 1 2.046 69212.9 1.0 2646 4192 6835 SUDHL4_400M_050219_1,6840 SUDHL4_400M_050219_1,6840,ITQTASFLL False False AQQVVLSSY 36.011634 497.284320056438 1858851.25 6835.0 ENSG00000116455|ENST00000235090|WDR77 0.9956060449282328 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6841 36.021 544.0 234050.0 25 0 17037.0 + 6251 DTNADKQLSF 10 164 569.7722219972757 1137.5298910613512 2 569.7724487185478 MULTI CID FTMS 0 0 0 6835 148436.65625 0.7018406577717585 -4 0.1488876342773437 6 Unmodified _DTNADKQLSF_ ENSG00000163220|ENST00000368738|S100A9 83.27773906761396 0.014381580010361 5 {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S{M(Oxidation (M))|F} 10 0 + 85.131 0.0 0.0 7.4838 7.4838 91.046 0.0 0.0 0.0 7.257724967479859 16.53212513775344 7.257724967479859 7.257724967479859 0 1.6989700043360187 0.0 1.1237125054200234 0.6549471895720984 + + {[ES]|[DT]|[{I|L}C]}NADKQ{I|L}S{M(Oxidation (M))|F};{[QS]|[NT]}DADKQ{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NADK{I|L}QS{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NADK[AG]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGADKQ{I|L}S{M(Oxidation (M))|F};[AG]SDADKQ{I|L}S{M(Oxidation (M))|F};{[QS]|[NT]}DADK{I|L}QS{M(Oxidation (M))|F};{[QS]|[NT]}DADK[AG]{I|L}S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}NADK{I|L}[AG]S{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}GGADK{I|L}QS{M(Oxidation (M))|F} 7.4838;6.8458;6.691;6.6782;6.371;6.3277;6.053;6.0402;5.8854;5.5781 +;-;-;-;-;-;-;-;-;- + 7024 1 2.046 97668.4 1.0 2647 4192 6835 SUDHL4_400M_050219_1,6841 SUDHL4_400M_050219_1,6841,DTNADKQLSF True True DTNADKQLSF 36.021207 569.772448718548 1245942.75 6835.0 ENSG00000163220|ENST00000368738|S100A9 4.276553948720296 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6842 36.026 241.0 290870.0 25 0 31710.0 17901 KQRPGQKEAPV 11 121 413.2389218098328 0 413.2387878298759 PEAK CID FTMS 0 0 0 6835 183517.0 0.7474702823125418 19 -0.8997917175292969 7 Unmodified _KQRPGQKEAPV_ ENST00000601658.5_1_2:149634897-149646240:-|nuORF 5.296884461304476 0.47618401536486 5 Q 1 10 1.5938 0.0 0.0 0.19331 0.0 0.0 411.23784010228434 282.1460054986938 693.3838456009781 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Q 0.19331 + + 1 + 1 2.046 60282.4 1.0 2648 4192 6835 SUDHL4_400M_050219_1,6842 SUDHL4_400M_050219_1,6842,KQRPGQKEAPV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6843 36.031 268.0 349950.0 25 0 42957.0 + 17065 KLDEDVKMI 9 122 545.793536157893 1089.5725193825858 2 545.7944824099541 MULTI CID FTMS 0 0 0 6835 178751.09375 0.6573187397208389 -2 0.0799522399902343 8 Unmodified _KLDEDVKMI_ ENSG00000066136|ENST00000447388|NFYC;ENST00000437925.1_1_9:89699796-89699949:-|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 83.42873516780209 0.0166860047644719 5 [K{I|L}]DEDVKM{I|L} 9 0 + 81.236 0.0 0.0 7.4558 7.4558 88.644 0.0 0.0 0.0 5.597526256773804 16.478174818886387 5.597526256773804 4.203103093438969 0 1.7689301784845295 0.6020599913279624 1.6886218330464624 0.3807196863200844 + + [K{I|L}]DEDVKM{I|L};[K{I|L}]DEDVMK{I|L};{NN|[MP]|[D{I|L}]|[EV]}KEDVKM{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EEDVKM{I|L};[{I|L}T]AAEDVKM{I|L};{NN|[MP]|[D{I|L}]|[EV]}KEDVMK{I|L};[{I|L}T][RD]DVKM{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EEDVMK{I|L};[{I|L}T]AAEDVMK{I|L};[{I|L}T][RD]DVMK{I|L} 7.4558;7.07;6.942;6.9044;6.6769;6.5563;6.5205;6.5187;6.2911;6.1347 +;-;-;-;-;-;-;-;-;- + 1156 1 2.046 75924.6 1.0 2649 4192 6835 SUDHL4_400M_050219_1,6843 SUDHL4_400M_050219_1,6843,KLDEDVKMI True True KLDEDVKMI 36.030678 545.794482409954 1383532.125 6835.0 ENSG00000066136|ENST00000447388|NFYC;;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;;nc|ENSG00000066136|Q13952|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC;;nc|ENSG00000066136|Q13952-5|NFYC;;ENST00000437925.1_1_9:89699796-89699949:-|nuORF 3.915405750274658 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6845 36.035 17.0 3339700.0 25 0 318400.0 + 40735 VLIDYQRNV 9 63 560.3134241577159 1118.6122953822317 2 560.3156005740166 MULTI CID FTMS 0 0 0 6844 1629153.25 0.4961850038611379 3 -0.0841331481933593 1 Unmodified _VLIDYQRNV_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF 22.736283301280096 0.2418982879461534 5 V{I|L}{I|L}DY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RP 9 4 + 76.336 0.0 0.0 6.8242 6.8242 85.502 0.0 0.0 0.0 63.57172793788305 10.0 10.0 2.498774732165998 0 0.4247425010840047 2.0 0.0 0.3494850021680094 V{I|L}{I|L}DY{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RP;V{I|L}YSTN{[VA]|[{I|L}G]}RP;V{I|L}YSTGG{[VA]|[{I|L}G]}RP;V{I|L}Y{NN|[MP]|[D{I|L}]|[EV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RP;[{I|L}V][QT]NTSM{I|L}{I|L};[{I|L}V][QT]GGTSM{I|L}{I|L};{[TV]|[{I|L}S]}[Q{I|L}]NTSM{I|L}{I|L};{[TV]|[{I|L}S]}[Q{I|L}]GGTSM{I|L}{I|L} 6.8242;6.6008;5.7815;5.1479;4.1229;3.3036;1.2261;0.40687 -;-;-;-;-;-;-;- 225 + 1 2.052 52361.6 1.0 2650 4193 6844 SUDHL4_400M_050219_1,6845 SUDHL4_400M_050219_1,6845,VLIDYQRNV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6846 36.043 432.0 190710.0 25 0 15895.0 37679 TLNDREYQL 9 123 576.2886113040271 1150.562669674854 2 576.2902099490166 MULTI CID FTMS 0 0 0 6844 62128.09765625 0.1217030255712365 4 -0.1125946044921875 2 Unmodified _TLNDREYQL_ ENSG00000084774|ENST00000264705|CAD 27.628801355627647 0.1796483985696185 5 Q{I|L} 2 7 20.507 0.0 0.0 1.7824 0.0 0.0 891.4098391850845 0.0 891.4098391850845 0.0 4.309483970152627 0.0 0.0 0 0.1923877696554315 0.0 0.0 0.0 + Q{I|L} 1.7824 + + 256 1 2.052 67542.7 1.0 2651 4193 6844 SUDHL4_400M_050219_1,6846 SUDHL4_400M_050219_1,6846,TLNDREYQL False True SSKPWPDATY 36.043167 576.290209949017 736361.8125 6844.0 ENSG00000054118|ENST00000354618|THRAP3 -0.1503680050373077 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6847 36.047 202.0 411450.0 25 0 60899.0 + 9276 FIAPSGHGL 9 102 449.7431527856417 897.4717526380834 2 449.7428161501884 MULTI CID FTMS 0 0 0 6844 274564.5 0.4001825540625111 -2 0.04730224609375 3 Unmodified _FIAPSGHGL_ ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000398921.6_1_7:45788229-45798731:-|nuORF;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7 46.92087301778293 0.0471210510596396 5 GSPA{[QN]|[E{I|L}]|[KN]} 6 7 36.63 0.0 0.0 4.0814 0.0 0.0 325.175584861525 0.0 325.175584861525 0.0 -1.0993671499740216 -1.0993671499740216 0.0 0 0.75 0.0 0.8494850021680094 0.0 GSPA{[QN]|[E{I|L}]|[KN]} 4.0814 - 168 1 2.052 67987.9 1.0 2652 4193 6844 SUDHL4_400M_050219_1,6847 SUDHL4_400M_050219_1,6847,FIAPSGHGL True True FIAPSGHGL 36.047022 449.742816150188 3183780.0 6844.0 nc|ENSG00000122545|Q16181-2|SEPTIN7;;ENST00000398921.6_1_7:45788229-45798731:-|nuORF;;ENSG00000122545|ENST00000350320|SEPTIN7;;ENST00000425198.1_1_7:35872473-35938044:+|nuORF 4.910946051279704 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6848 36.051 215.0 635350.0 25 0 60265.0 20547 LLLTLVEVII 10 116 375.9198606801807 1124.737752640742 3 375.9203369021416 MULTI CID FTMS 0 0 0 6844 206779.9375 0.0756827780543667 -6 0.2724952697753906 4 Unmodified _LLLTLVEVII_ ENSG00000170412|ENST00000392627|GPRC5C;nc|ENSG00000170412|Q9NQ84-2|GPRC5C 27.22323531849824 0.3570408936368626 5 WV{I|L}{I|L} 4 7 34.725 0.0 0.0 3.0874 0.0 0.0 595.4191761701187 0.0 595.4191761701187 0.0 12.048734808312034 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 WV{I|L}{I|L} 3.0874 - 66 1 2.052 110045.1 1.0 2653 4193 6844 SUDHL4_400M_050219_1,6848 SUDHL4_400M_050219_1,6848,LLLTLVEVII False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6849 36.057 313.0 203380.0 25 0 20400.0 8567 ETLRPLAY 8 98 481.76864281233856 961.5227326914772 2 481.7687255740166 MULTI CID FTMS 0 0 0 6844 137331.5 0.9846060641908392 2 -0.0758857727050781 5 Unmodified _ETLRPLAY_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 18.13498045792455 0.6430038125133779 5 P[KT]AY 5 5 31.753 0.0 0.0 3.3023 0.0 0.0 383.20572937292087 0.0 383.20572937292087 0.0 18.988299613635924 0.0 0.0 0 0.75 0.0 0.3807196863200844 0.4247425010840047 P[KT]AY 3.3023 - 137 + 1 2.052 53418.1 1.0 2654 4193 6844 SUDHL4_400M_050219_1,6849 SUDHL4_400M_050219_1,6849,ETLRPLAY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6850 36.066 514.0 485790.0 25 0 119040.0 + 31321 RMIDIQTRM 9 146 582.304369369439 1162.594185805678 2 582.3042480349541 MULTI CID FTMS 0 0 0 6844 143047.03125 0.0701655792431635 -6 0.2724952697753906 6 Unmodified _RMIDIQTRM_ ENSG00000071462|ENST00000265758|BUD23;ENST00000463307.5_1_7:73097949-73107126:+|nuORF;nc|ENSG00000071462|O43709-2|BUD23;nc|ENSG00000071462|O43709-3|BUD23 35.995811192298525 0.0974376724572558 5 MR{I|L}D{I|L}QTRM 9 2 + 62.314 0.0 0.0 5.3599 5.3599 81.406 0.0 0.0 0.0 4.018637558036673 2.319490765206808 2.319490765206808 2.319490765206808 0 2.004432191740108 0.0 0.3807196863200844 1.305462187404089 MR{I|L}D{I|L}QTRM;MR{I|L}D{I|L}QTMR;RM{I|L}D{I|L}QTRM;RM{I|L}D{I|L}QTMR;MR{I|L}D[WR]RM;MR{I|L}D[WR]MR;RM{I|L}D[WR]RM;RM{I|L}D[WR]MR;[VG]M{I|L}D{I|L}QT{[CA]|SS}{I|L};MR{I|L}D{I|L}QT{[CA]|SS}{I|L} 5.3599;5.1604;5.0142;4.8147;4.5362;4.3367;4.1905;3.991;3.706;3.6375 -;-;+;-;-;-;-;-;-;- + 990 + 1 2.052 188313.9 1.0 2655 4193 6844 SUDHL4_400M_050219_1,6850 SUDHL4_400M_050219_1,6850,RMIDIQTRM True True RMIDIQTRM 36.065863 582.304248034954 19890213.0 6844.0 nc|ENSG00000071462|O43709-2|BUD23;;ENSG00000071462|ENST00000265758|BUD23;;nc|ENSG00000071462|O43709-3|BUD23;;ENST00000463307.5_1_7:73097949-73107126:+|nuORF 6.695151170094808 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6851 36.071 274.0 259270.0 25 0 13945.0 33422 SHLPPVSL 8 123 425.2446066336797 848.4746603341595 2 425.2453185915947 MULTI CID FTMS 0 0 0 6844 116272.125 1.0 0 0.0 7 Unmodified _SHLPPVSL_ ENST00000430246.6_1_14:21730764-21730995:-|nuORF 32.116972079565 0.368454113111938 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TVPV{[TV]|[{I|L}S]} 8 3 + 33.291 0.0 0.0 3.9236 3.9236 80.966 0.0 0.0 0.0 6.446123420134256 6.989700043360173 6.446123420134256 6.446123420134256 0 0.5 0.7695510786217261 0.7742275032520141 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TVPV{[TV]|[{I|L}S]};[HT]PVPV{[TV]|[{I|L}S]};[VP][HT]PV{[TV]|[{I|L}S]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R[{I|L}T]{[TV]|[{I|L}S]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VG][{I|L}T]{[TV]|[{I|L}S]} 3.9236;3.1639;2.1429;1.8623;0.76258 -;-;-;-;- 117 1 2.052 63146.2 1.0 2656 4193 6844 SUDHL4_400M_050219_1,6851 SUDHL4_400M_050219_1,6851,SHLPPVSL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6853 36.087 800.0 152820.0 25 0 13072.0 + 1183 AIANEDLMMEA 11 154 604.2704668577112 1206.5263807822223 2 604.2720214724541 MULTI CID FTMS 0 0 0 6852 105552.0625 1.0 0 0.0 1 Unmodified _AIANEDLMMEA_ REV__ENSG00000165533|ENST00000380656|TTC8;REV__ENST00000556567.5_1_14:89291033-89307657:+|nuORF;REV__nc|ENSG00000165533|Q8TAM2-3|TTC8;REV__nc|ENSG00000165533|Q8TAM2-6|TTC8;REV__nc|ENSG00000165533|Q8TAM2|TTC8 17.11289562659939 0.6791789249425932 5 [{I|L}A]A{M(Oxidation (M))|F}EAVE 8 -1 63.136 0.0 0.0 5.2329 0.0 0.0 0.0 373.0645846002563 373.0645846002563 48.91441272380455 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3494850021680094 0.0 [{I|L}A]A{M(Oxidation (M))|F}EAVE 5.2329 - 623 + 1 2.052 90108.5 0.5600000023841858 2657 4194 6852 SUDHL4_400M_050219_1,6853 SUDHL4_400M_050219_1,6853,AIANEDLMMEA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6854 36.09 144.0 360900.0 25 0 21910.0 + 2053 APLPPHLPGA 10 75 485.2792959137977 968.5440388943954 2 485.2790405154228 MULTI CID FTMS 0 0 0 6852 281561.40625 0.9813818825526396 3 -0.072357177734375 2 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 24.67388899826682 0.4143206957119831 5 [PA]{I|L}Y{I|L}PA 7 4 46.788 0.0 0.0 4.8308 0.0 0.0 0.0 240.10211929894533 240.10211929894533 32.095238340266334 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 [PA]{I|L}Y{I|L}PA 4.8308 - 204 1 2.052 45362.1 1.0 2658 4194 6852 SUDHL4_400M_050219_1,6854 SUDHL4_400M_050219_1,6854,APLPPHLPGA False True False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 6855 36.093 150.0 306320.0 25 0 22345.0 + -1 FQHTGIYSV 9 80 526.2641983234932 525.2569218568932 1 526.2644531130791 MULTI CID FTMS 0 0 0 6852 177431.328125 1.0 0 0.0 3 ENST00000583241.1_1_17:16331654-16335285:+|nuORF;ENSG00000187688|ENST00000338560|TRPV2 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSV 5 -1 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S + + 18.94 4.437 1.3816 3.6059 3.6059 55.28 0.0 0.0 0.0 0.0 4.960762528683702 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SSV 3.6059 - 36 + 1 2.052 42617.5 1.0 2659 4194 6852 SUDHL4_400M_050219_1,6855 SUDHL4_400M_050219_1,6855, False False FQHTGIYSV 36.093165 526.264453113079 908314.625 6852.0 ENST00000583241.1_1_17:16331654-16335285:+|nuORF;;ENSG00000187688|ENST00000338560|TRPV2 -0.2502723137537638 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6856 36.098 244.0 340860.0 25 0 24985.0 + 31261 RLVPSVNGV 9 103 470.7822244730448 939.5498960128896 2 470.7825500369072 MULTI CID FTMS 0 0 0 6852 160365.859375 0.2650805437250278 -5 0.2005844116210937 4 Unmodified _RLVPSVNGV_ ENSG00000100714|ENST00000652337|MTHFD1;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 49.55428908609986 0.0413471690215031 5 [R{I|L}]V[PS]VNGV 9 0 + 49.575 0.0 0.0 5.2765 5.2765 79.162 0.0 0.0 0.0 0.8156289341643372 12.447274948966935 0.8156289341643372 0.8156289341643372 0 1.548455006504028 0.0 0.4247425010840047 0.0 + + [R{I|L}]V[PS]VNGV;[PS]V[R{I|L}]VNGV;[R{I|L}]V[PS]VGGGV;[PS]V[R{I|L}]VGGGV;[R{I|L}][HK][KC]GV;[R{I|L}]V[VG]VN[PS];[R{I|L}]V[PS][KG][PS];[PS]V[R{I|L}][KG][PS];[R{I|L}][HK][C(Carbamidomethyl (C))K]V;[PA]P[R{I|L}][KC]R 5.2765;5.1897;4.2964;4.2096;1.7157;1.129;0.64975;0.56294;0.50126;0.41232 +;-;-;-;-;-;-;-;-;- + 243 1 2.052 67442.2 1.0 2660 4194 6852 SUDHL4_400M_050219_1,6856 SUDHL4_400M_050219_1,6856,RLVPSVNGV True True RLVPSVNGV 36.097719 470.782550036907 3111157.0 6852.0 ENSG00000100714|ENST00000652337|MTHFD1;;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 6.593131383260091 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6857 36.107 500.0 307710.0 25 0 35704.0 + + 36206 RLTDEQVAL 9 166 522.7878945103387 1043.5612360874773 2 522.7875244021416 MULTI CID FTMS 0 0 0 6852 103290.109375 0.5686870761074618 -1 0.0402374267578125 5 Unmodified _SVWLEQVAL_ nc|ENSG00000261236|Q14137-2|BOP1;ENSG00000261236|ENST00000569669|BOP1 27.628801355627647 0.1796483985696185 5 [{I|L}T]RDEQVA{I|L} 9 -1 + 62.173 0.0 0.0 5.9578 5.9578 89.863 0.0 0.0 0.0 11.926568222097906 17.503958636721734 11.926568222097906 9.208187539523747 0 0.9247425010840048 1.6989700043360187 0.4666152729074456 0.0 [{I|L}T]RDEQVA{I|L};[{I|L}T]RDE[AG]VA{I|L};[{I|L}T]RDEN{I|L}A{I|L};[{I|L}T]RDEGG{I|L}A{I|L};[AG]T[KQ]EQVA{I|L};[VS][W{I|L}]EQVA{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}EQVA{I|L};[{M(Oxidation (M))|F}V]KD{I|L}A[PA]A{I|L};[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EQVA{I|L};{[ES]|[DT]|[{I|L}C]}[R{I|L}]EQVA{I|L} 5.9578;5.0754;4.8131;3.9307;3.4873;2.9976;2.9851;2.9073;2.8289;2.7454 -;-;-;-;-;+;-;-;-;- + 3954 1 2.052 122630.9 1.0 2661 4194 6852 SUDHL4_400M_050219_1,6857 SUDHL4_400M_050219_1,6857,SVWLEQVAL False False RLTDEQVAL 36.106555 522.787524402142 821109.5625 6852.0 nc|ENSG00000261236|Q14137-2|BOP1;;ENSG00000261236|ENST00000569669|BOP1 2.153633991877238 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6859 36.111 13.0 4877100.0 25 0 1093000.0 + 1302 AIVDKVPSV 9 58 464.27911546026814 926.5436779873364 2 464.2793456912041 MULTI CID FTMS 0 0 0 6858 4585113.0 0.9847327236015716 -1 0.0356483459472656 1 Unmodified _AIVDKVPSV_ ENSG00000181789|ENST00000314797|COPG1 41.8396318013385 0.0653578398400075 5 [{I|L}A]VDKVPSV 9 0 + 60.505 0.0 0.0 6.5302 6.5302 94.615 0.0 0.0 0.0 23.202300473794885 13.817818051233957 13.817818051233957 26.92593794827836 0 0.4247425010840047 2.0 0.6237125054200234 0.0 + + [{I|L}A]VDKVPSV;[{I|L}A]VDK[{I|L}T][PA] 6.5302;3.6241 +;- + 173 + 1 2.052 58075.4 1.0 2662 4195 6858 SUDHL4_400M_050219_1,6859 SUDHL4_400M_050219_1,6859,AIVDKVPSV True True AIVDKVPSV 36.11135 464.279345691204 175671088.0 6858.0 ENSG00000181789|ENST00000314797|COPG1 5.703745206197103 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6860 36.115 178.0 596620.0 25 0 101310.0 + -1 MAIIKFIM 8 85 491.7789429305327 981.5433329278652 2 491.7790099978447 MULTI CID FTMS 0 0 0 6858 206142.40625 0.812544274442356 -1 0.0356483459472656 2 Oxidation (M) _MAIIKFIM(Oxidation (M))_ REV__ENSG00000136546|ENST00000643258|SCN7A 26.34127834903884 0.4900704351052977 5 {[DS]|[MA]|[CV]|TT}{I|L}PEKQ 7 -1 48.721 0.0 0.0 4.9637 0.0 0.0 0.0 181.0985506647094 181.0985506647094 31.48570980063916 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.0 0.3807196863200844 {[DS]|[MA]|[CV]|TT}{I|L}PEKQ 4.9637 - 125 + 1 2.052 86903.3 1.0 2663 4195 6858 SUDHL4_400M_050219_1,6860 SUDHL4_400M_050219_1,6860,MAIIKFIM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6862 36.12 51.0 780020.0 25 0 61258.0 3081 AVMSLSFYL 9 62 515.7698082123181 1029.5250634914362 2 516.2721435427666 MULTI CID FTMS 0 0 0 6861 775440.0625 0.8372929888163347 5 -0.2244148254394531 1 Unmodified _AVMSLSFYL_ ENSG00000134538|ENST00000256958|SLCO1B1 12.531546534597751 0.4974689918368763 5 {[SA]|[TG]}TES 5 7 24.166 0.0 0.0 2.3473 0.0 0.0 0.0 551.2938936822874 551.2938936822874 8.681054126236518 0.0 0.0 0.0 0 0.2215141619232908 0.0 0.4247425010840047 0.0 {[SA]|[TG]}TES 2.3473 - 94 + 1 2.052 36063.9 1.0 2664 4196 6861 SUDHL4_400M_050219_1,6862 SUDHL4_400M_050219_1,6862,AVMSLSFYL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6863 36.128 465.0 443410.0 25 0 152160.0 31084 RLLDRKVLL 9 101 563.3769286679653 1124.7393044027306 2 563.3773071169853 MULTI CID FTMS 0 0 0 6861 281247.4375 0.5412457365233846 -3 0.0841331481933593 2 Unmodified _RLLDRKVLL_ ENSG00000143457|ENST00000271732|GOLPH3L 26.020703789607367 0.2001090068861241 5 {I|L}{I|L} 2 7 20.573 0.0 0.0 1.8292 0.0 0.0 880.563197075859 0.0 880.563197075859 0.0 11.27636252551653 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 1.8292 + + 22 1 2.052 159371.5 1.0 2665 4196 6861 SUDHL4_400M_050219_1,6863 SUDHL4_400M_050219_1,6863,RLLDRKVLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6864 36.13 107.0 813840.0 25 0 219330.0 -1 0 104 391.22729085778286 390.2200143911829 1 391.2246887087822 MULTI CID FTMS 0 0 0 6861 533343.5625 1.0 0 0.0 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.052 73183.5 1.0 2666 4196 6861 SUDHL4_400M_050219_1,6864 SUDHL4_400M_050219_1,6864, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6865 36.133 171.0 512320.0 25 0 50628.0 + 31322 RMIDIQTRM 9 113 388.5381115637164 1162.5925052913492 3 388.5385314822197 MULTI CID FTMS 0 0 0 6861 178488.5 0.4971937904572684 -3 0.0841331481933593 4 Unmodified _RMIDIQTRM_ ENSG00000071462|ENST00000265758|BUD23;ENST00000463307.5_1_7:73097949-73107126:+|nuORF;nc|ENSG00000071462|O43709-2|BUD23;nc|ENSG00000071462|O43709-3|BUD23 32.89776655970281 0.1144444835665315 5 {[WT]|[RM]}{I|L}D{I|L} 5 4 26.184 0.0 0.0 2.2522 0.0 0.0 0.0 531.2335890099101 531.2335890099101 10.699849938126889 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.3252574989159953 + {[WT]|[RM]}{I|L}D{I|L} 2.2522 + + 222 1 2.052 73189.9 1.0 2667 4196 6861 SUDHL4_400M_050219_1,6865 SUDHL4_400M_050219_1,6865,RMIDIQTRM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6866 36.138 219.0 194650.0 25 0 18541.0 + -1 LTQEQMQAL 9 91 539.2656292257576 1076.5167055183151 2 539.2668945193291 MULTI CID FTMS 0 0 0 6861 143798.4375 0.6669112150304777 -2 0.0438957214355468 5 Oxidation (M) _LTQEQM(Oxidation (M))QAL_ REV__ENSG00000160072|ENST00000673477|ATAD3B;REV__ENSG00000197785|ENST00000378756|ATAD3A;REV__ENSG00000215915|ENST00000378785|ATAD3C;REV__nc|ENSG00000197785|Q9NVI7|ATAD3A 28.486842064014134 0.1687311288560894 5 [{I|L}T]Q 3 -1 32.082 0.0 0.0 2.9802 0.0 0.0 0.0 731.3030879248182 731.3030879248182 14.607704751370877 0.0 0.0 0.0 0 0.0 2.0 0.2887254899964357 0.3252574989159953 [{I|L}T]Q 2.9802 + + 178 1 2.052 42249.4 1.0 2668 4196 6861 SUDHL4_400M_050219_1,6866 SUDHL4_400M_050219_1,6866,LTQEQMQAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6867 36.143 311.0 333230.0 25 0 26302.0 + 44094 YIYHGTVKL 9 130 365.2063493631595 1092.5972186896786 3 365.2063171267509 MULTI CID FTMS 0 0 0 6861 115053.5 0.7831987535061362 1 -0.0284614562988281 6 Unmodified _YIYHGTVKL_ ENSG00000123444|ENST00000430070|KBTBD4;nc|ENSG00000123444|Q9NVX7-1|KBTBD4;nc|ENSG00000123444|Q9NVX7-3|KBTBD4 13.042465956692816 0.4836390050082244 5 [Y{I|L}]YH 4 5 36.198 0.0 0.0 3.313 0.0 0.0 0.0 513.3035372369749 513.3035372369749 23.93575203269588 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [Y{I|L}]YH 3.313 + + 87 + 1 2.052 86803.1 1.0 2669 4196 6861 SUDHL4_400M_050219_1,6867 SUDHL4_400M_050219_1,6867,YIYHGTVKL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6869 36.148 48.0 987030.0 25 0 122590.0 + 30328 RAFDQGADAIY 11 57 613.7936597841332 1225.5727666350665 2 613.7938720583916 MULTI CID FTMS 0 0 0 6868 883194.3125 0.3535173744281248 4 -0.195953369140625 1 Unmodified _RAFDQGADAIY_ ENSG00000184076|ENST00000330029|UQCR10;nc|ENSG00000184076|Q9UDW1-2|UQCR10 27.088373467376528 0.4561593585727911 5 DQGADA{I|L}Y 8 3 65.738 0.0 0.0 5.3639 0.0 0.0 374.2060108869157 0.0 374.2060108869157 0.0 58.7485192142038 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 + DQGADA{I|L}Y 5.3639 + + 252 1 2.052 44929.2 1.0 2670 4197 6868 SUDHL4_400M_050219_1,6869 SUDHL4_400M_050219_1,6869,RAFDQGADAIY False True RAFDQGADAIY 36.148058 613.793872058392 40495884.0 6868.0 ENSG00000184076|ENST00000330029|UQCR10;;nc|ENSG00000184076|Q9UDW1-2|UQCR10 9.391183217366535 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6870 36.162 800.0 118330.0 25 0 18466.0 -1 0 77 674.6917060466122 2021.0532887400368 3 675.0256225466728 MULTI CID FTMS 0 0 0 6868 95137.9609375 0.5731827766225627 6 -0.3302001953125 2 5 KPTGAR 6 -1 42.172 0.0 0.0 2.0866 0.0 0.0 1024.480959207982 383.1934298151001 1407.674389023082 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3494850021680094 0.3807196863200844 KPTGAR 2.0866 - 257 + 1 2.052 79418.4 0.6499999761581421 2671 4197 6868 SUDHL4_400M_050219_1,6870 SUDHL4_400M_050219_1,6870, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6872 36.167 50.0 983980.0 25 0 81071.0 + 30812 RIIDTVAQV 9 75 507.8007075719276 1013.5868622106552 2 507.8008605837822 MULTI CID FTMS 0 0 0 6871 872414.25 0.6330357410103263 4 -0.2559318542480469 1 Unmodified _RIIDTVAQV_ ENSG00000102699|ENST00000381989|PARP4 43.77239144664712 0.0547478964384323 5 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]TVAQV 9 2 + 60.621 0.0 0.0 5.9809 5.9809 89.968 0.0 0.0 0.0 0.7378621416091846 45.72682509756042 0.7378621416091846 9.208187539523747 0 1.0994850021680094 0.0 0.7742275032520141 0.0 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]TVAQV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]TVA[AG]V;{NN|[MP]|[D{I|L}]|[EV]}AVVR{[QD]|[EN]|[WG]|[KD]|[RS]}V;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]R{[QD]|[EN]|[WG]|[KD]|[RS]}V 5.9809;5.0724;2.7504;1.7904 -;-;-;- 98 1 2.052 43197.3 1.0 2672 4198 6871 SUDHL4_400M_050219_1,6872 SUDHL4_400M_050219_1,6872,RIIDTVAQV True True RIIDTVAQV 36.166679 507.800860583782 6565566.0 6871.0 ENSG00000102699|ENST00000381989|PARP4 4.872813940048218 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6873 36.168 50.0 846980.0 25 0 58779.0 + 13037 HAVFPTSSM 9 77 488.7311514256544 975.4477499181088 2 488.7314330935478 MULTI CID FTMS 0 0 0 6871 461426.40625 0.8125547962136656 -1 0.0186195373535156 2 Unmodified _HAVFPTSSM_ ENSG00000075340|ENST00000264436|ADD2;nc|ENSG00000075340|P35612-2|ADD2;nc|ENSG00000075340|P35612-3|ADD2;nc|ENSG00000075340|P35612-4|ADD2;nc|ENSG00000075340|P35612-5|ADD2;nc|ENSG00000075340|P35612-6|ADD2;nc|ENSG00000075340|P35612-8|ADD2;nc|ENSG00000075340|P35612-9|ADD2 13.50788311687929 0.4710407108020397 5 SM 2 7 17.959 0.0 0.0 1.8411 0.0 0.0 739.364740129826 0.0 739.364740129826 0.0 4.771212547196626 0.0 0.0 0 0.0 0.0 0.0 0.0 + SM 1.8411 + + 15 + 1 2.052 37541.2 1.0 2673 4198 6871 SUDHL4_400M_050219_1,6873 SUDHL4_400M_050219_1,6873,HAVFPTSSM False True HAVFPTSSM 36.167987 488.731433093548 5687879.0 6871.0 nc|ENSG00000075340|P35612-6|ADD2;;nc|ENSG00000075340|P35612-3|ADD2;;nc|ENSG00000075340|P35612-2|ADD2;;nc|ENSG00000075340|P35612-4|ADD2;;nc|ENSG00000075340|P35612-9|ADD2;;nc|ENSG00000075340|P35612-5|ADD2;;nc|ENSG00000075340|P35612-8|ADD2;;ENSG00000075340|ENST00000264436|ADD2 7.240020751953125 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6874 36.171 125.0 473750.0 25 0 57117.0 + 34829 SQFPQPQHF 9 79 558.2675108553113 1114.5204687774226 2 558.2675048708916 MULTI CID FTMS 0 0 0 6871 358033.09375 1.0 0 0.0 3 Unmodified _SQFPQPQHF_ ENSG00000143157|ENST00000367876|POGK 41.8396318013385 0.0653578398400075 5 {[QS]|[NT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}QP 6 4 50.979 0.0 0.0 4.5741 0.0 0.0 0.0 377.1447723265039 377.1447723265039 40.26593150440647 0.0 0.0 0.0 0 1.0 1.0969100130080565 0.2302046884880938 1.3807196863200843 {[QS]|[NT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}QP 4.5741 - 231 1 2.052 51195.6 1.0 2674 4198 6871 SUDHL4_400M_050219_1,6874 SUDHL4_400M_050219_1,6874,SQFPQPQHF True True SQFPQPQHF 36.170569 558.267504870892 3082485.0 6871.0 ENSG00000143157|ENST00000367876|POGK 5.9102834065755205 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6875 36.175 232.0 212240.0 25 0 11580.0 + 40975 VLYHVETEV 9 101 544.7832167626067 1087.5518805920133 2 544.7838622927666 MULTI CID FTMS 0 0 0 6871 149965.6875 1.0 0 0.0 4 Unmodified _VLYHVETEV_ ENSG00000129691|ENST00000343823|ASH2L;ENST00000520079.1_1_8:37996261-37996586:+|nuORF;nc|ENSG00000129691|Q9UBL3-2|ASH2L;nc|ENSG00000129691|Q9UBL3-3|ASH2L 46.92087301778293 0.0471210510596396 5 [{I|L}V]{[WN]|[YH]}VETEV 9 0 + 59.899 0.0 0.0 5.5077 5.5077 83.457 0.0 0.0 0.0 3.590219426416681 16.478174818886373 3.590219426416681 3.590219426416681 0 0.5 2.0 0.9247425010840048 0.0 + + [{I|L}V]{[WN]|[YH]}VETEV;{[WN]|[YH]}V{I|L}VETEV;[YV]H{I|L}VETEV;{[WN]|[YH]}{I|L}VVETEV;[HV]Y{I|L}VETEV;[{I|L}V]{[WN]|[YH]}V[DP]{M(Oxidation (M))|F}V;{[WN]|[YH]}V{I|L}V[DP]{M(Oxidation (M))|F}V;{[ET]|[MV]}P[KG]VETEV;[YV]H{I|L}V[DP]{M(Oxidation (M))|F}V;{[WN]|[YH]}{I|L}VV[DP]{M(Oxidation (M))|F}V 5.5077;5.1776;5.0157;4.9736;4.577;4.3162;3.986;3.9561;3.8241;3.782 +;-;-;-;-;-;-;-;-;- + 564 1 2.052 44853.2 1.0 2675 4198 6871 SUDHL4_400M_050219_1,6875 SUDHL4_400M_050219_1,6875,VLYHVETEV True True VLYHVETEV 36.174927 544.783862292767 699084.25 6871.0 ENSG00000129691|ENST00000343823|ASH2L;;ENST00000520079.1_1_8:37996261-37996586:+|nuORF;;nc|ENSG00000129691|Q9UBL3-3|ASH2L;;nc|ENSG00000129691|Q9UBL3-2|ASH2L 6.66910473505656 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6876 36.189 800.0 136830.0 25 0 13959.0 + 31194 RLQDQHMFY 9 90 619.2929046738002 1236.5712564144003 2 619.2926513552666 MULTI CID FTMS 0 0 0 6871 89677.8984375 1.0 0 0.0 5 Unmodified _RLQDQHMFY_ ENSG00000164933|ENST00000297578|SLC25A32;ENST00000523701.1_1_8:104413742-104414267:-|nuORF 20.41453444215458 0.284085796332423 5 QHM{M(Oxidation (M))|F}Y 5 4 51.37 0.0 0.0 4.1542 0.0 0.0 512.2708125096509 0.0 512.2708125096509 0.0 40.400990676322905 0.0 0.0 0 1.2614393726401687 0.0 0.0 0.3807196863200844 + QHM{M(Oxidation (M))|F}Y 4.1542 + + 105 1 2.052 87548.3 0.5799999833106995 2676 4198 6871 SUDHL4_400M_050219_1,6876 SUDHL4_400M_050219_1,6876,RLQDQHMFY False True RLQDQHMFY 36.188762 619.292651355267 543201.8125 6871.0 ENST00000523701.1_1_8:104413742-104414267:-|nuORF;;ENSG00000164933|ENST00000297578|SLC25A32 7.428467432657878 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6878 36.199 390.0 211340.0 25 0 16107.0 -1 0 80 874.9054764860379 1747.7964000388756 2 875.3983032107353 MULTI CID FTMS 0 0 0 6877 150698.984375 0.059121405417864 32 -1.5078010559082031 1 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NADQ[NP][YT]{I|L}Q 15 -1 + 71.56 0.0 0.0 4.0943 4.0943 81.609 0.0 0.0 0.0 53.46098929051037 8.78530614985209 8.78530614985209 6.690067809585756 0 0.8494850021680094 0.0 0.6109243748081782 1.4436726795685342 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NADQ[NP][YT]{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NWQ[NP][YT]{I|L}Q;[NP]{I|L}N{M(Oxidation (M))|F}[MT]G[C(Carbamidomethyl (C))K]{I|L}DP{[QN]|[E{I|L}]|[KN]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{M(Oxidation (M))|F}[MT]G[C(Carbamidomethyl (C))K]{I|L}DP{[QN]|[E{I|L}]|[KN]} 4.0943;3.7115;1.9907;1.7892 -;-;-;- 632 + 1 2.052 60318.7 1.0 2677 4199 6877 SUDHL4_400M_050219_1,6878 SUDHL4_400M_050219_1,6878, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6879 36.203 215.0 345750.0 25 0 29592.0 + 36223 SVYPNGHFV 9 100 510.2508883826373 1018.4872238320746 2 510.2508727908134 MULTI CID FTMS 0 0 0 6877 193697.3125 0.804004512729913 6 -0.425048828125 2 Unmodified _SVYPNGHFV_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 21.74664581756881 0.2544899275067181 5 [VS]YP 4 5 34.297 0.0 0.0 3.3674 0.0 0.0 0.0 569.2480562799436 569.2480562799436 23.58349385648225 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + [VS]YP 3.3674 + + 201 + 1 2.052 65196.8 1.0 2678 4199 6877 SUDHL4_400M_050219_1,6879 SUDHL4_400M_050219_1,6879,SVYPNGHFV False True SVYPNGHFV 36.203227 510.250872790813 2580206.75 6877.0 ENST00000564909.5_1_15:66585934-66618751:+|nuORF;;nc|ENSG00000166938|Q8TF46-2|DIS3L;;nc|ENSG00000166938|Q8TF46-3|DIS3L;;nc|ENSG00000166938|Q8TF46-4|DIS3L;;ENSG00000166938|ENST00000319212|DIS3L 6.892329374949138 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6880 36.217 800.0 292170.0 25 0 39892.0 + 43242 WDFIQEDNAKD 11 113 690.8050068414809 1379.5954607497615 2 690.8059570193291 MULTI CID FTMS 0 0 0 6877 180723.515625 0.7004784881982238 -2 0.0454902648925781 3 Unmodified _WDFIQEDNAKD_ REV__ENSG00000075151|ENST00000602326|EIF4G3;REV__nc|ENSG00000075151|O43432-3|EIF4G3;REV__nc|ENSG00000075151|O43432-4|EIF4G3;REV__nc|ENSG00000075151|O43432|EIF4G3 11.494710602746466 0.7960433852372589 5 [K{I|L}]WDE[NS]W{I|L}K 10 -1 41.832 0.0 0.0 3.0322 0.0 0.0 0.0 76.933438464013 76.933438464013 24.92035480070725 0.0 0.0 0.0 0 0.0 0.0 0.0 1.3829131673969606 [K{I|L}]WDE[NS]W{I|L}K 3.0322 - 1158 1 2.052 174889.4 0.7799999713897705 2679 4199 6877 SUDHL4_400M_050219_1,6880 SUDHL4_400M_050219_1,6880,WDFIQEDNAKD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6881 36.222 239.0 293220.0 25 0 36343.0 + + 41023 RLSETDFKV 9 88 547.7962816084596 1093.578010283719 2 547.7944213747978 MULTI CID FTMS 0 0 0 6877 117324.2265625 0.7779403735356798 -1 0.0268707275390625 4 Unmodified _VMERWFVK_ ENSG00000146457|ENST00000621533|WTAP;nc|ENSG00000146457|Q15007-2|WTAP 19.256988751693697 0.6264283240490721 5 V[RH][DG]H{M(Oxidation (M))|F}KV 9 -1 + 26.841 0.0 0.0 2.4544 2.4544 82.937 0.0 0.0 0.0 3.50588706572886 11.043675680029676 3.50588706572886 12.884740776916637 0 0.5 0.0 0.0 0.5866968715561641 V[RH][DG]H{M(Oxidation (M))|F}KV;V[RH][DG]HV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 2.4544;1.2762 -;- 92 + 1 2.052 59401.3 1.0 2680 4199 6877 SUDHL4_400M_050219_1,6881 SUDHL4_400M_050219_1,6881,VMERWFVK False False RLSETDFKV 36.221544 547.794421374798 556269.0 6877.0 ENSG00000146457|ENST00000621533|WTAP;;nc|ENSG00000146457|Q15007-2|WTAP 3.963972647984823 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6882 36.225 190.0 468500.0 25 0 100010.0 -1 0 85 458.2368169408937 457.2295404742937 1 458.2391845583916 MULTI CID FTMS 0 0 0 6877 101697.7109375 1.0 0 0.0 5 5 [VP]WG 4 -1 + 18.842 0.0 0.0 4.1209 4.1209 86.932 0.0 0.0 0.0 1.903698325741008 4.237804816140258 1.903698325741008 18.841898585902133 0 0.0 0.7958800173440752 0.0 0.0 [VP]WG 4.1209 - 30 1 2.052 72910.9 1.0 2681 4199 6877 SUDHL4_400M_050219_1,6882 SUDHL4_400M_050219_1,6882, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6883 36.239 800.0 167830.0 25 0 14460.0 + 8012 EMMEKKDEQFY 11 129 739.3208707009252 1476.6271884686505 2 739.3209716677666 MULTI CID FTMS 0 0 0 6877 88534.5703125 0.5660037964584435 -1 0.0268707275390625 6 Unmodified _EMMEKKDEQFY_ REV__ENSG00000102174|ENST00000379374|PHEX 5.731851221503515 0.8481046878870278 5 {[QG]|[NA]}G[HQ]EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 88.907 0.0 0.0 6.021 6.021 86.167 0.0 0.0 0.0 4.869520796508112 11.448658907276382 4.869520796508112 4.869520796508112 0 0.8935078169319297 0.638272163982407 1.0994850021680094 1.610924374808178 {[QG]|[NA]}G[HQ]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HQ]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}A[HN]EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HQ]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HQ]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HQ]EAQQGGA{M(Oxidation (M))|F}Y;[AG]N[HQ]EAQQNA{M(Oxidation (M))|F}Y;[HA]SPDEAQQNA{M(Oxidation (M))|F}Y;[HS]APDEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HQ]EAQQGGA{M(Oxidation (M))|F}Y 6.021;5.6912;5.5264;5.4065;5.4065;5.4065;5.2202;5.2182;5.1473;5.075 -;-;-;-;-;-;-;-;-;- 8653 1 2.052 97867.1 0.5699999928474426 2682 4199 6877 SUDHL4_400M_050219_1,6883 SUDHL4_400M_050219_1,6883,EMMEKKDEQFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6884 36.253 800.0 94902.0 25 0 20134.0 -1 0 52 1142.1085174692894 3423.303723008068 3 1142.441821277142 MULTI CID FTMS 0 0 0 6877 122708.2578125 1.0 0 0.0 7 5 YAT 3 -1 8.4607 0.0 0.0 0.24715 0.0 0.0 2571.91774996295 513.2132889697373 3085.131038932688 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 YAT 0.24715 - 52 + 1 2.052 68462.2 0.5 2683 4199 6877 SUDHL4_400M_050219_1,6884 SUDHL4_400M_050219_1,6884, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6886 36.269 800.0 128780.0 25 0 9099.6 -1 NMGLMLSQ 8 99 909.4154616425292 908.4081851759292 1 909.4162475466728 MULTI CID FTMS 0 0 0 6885 160324.234375 0.6682389973970544 6 -0.4392166137695312 1 Oxidation (M) _NM(Oxidation (M))GLMLSQ_ ENST00000265394.9_1_7:29135721-29135769:-|nuORF 16.942295170755138 0.6606234159769251 5 [NP]{I|L}N{M(Oxidation (M))|F}S{[MS]|[{M(Oxidation (M))|F}A]} 8 -1 + 25.525 0.0 0.0 2.8099 2.8099 79.329 0.0 0.0 0.0 3.4948500216800937 13.275983264404497 3.4948500216800937 7.255835646988427 0 0.0 0.0 0.0 0.6139829889124311 [NP]{I|L}N{M(Oxidation (M))|F}S{[MS]|[{M(Oxidation (M))|F}A]};[NP]{I|L}NW{[YC]|[HE]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}S{[MS]|[{M(Oxidation (M))|F}A]};[NP]{I|L}GG{M(Oxidation (M))|F}S{[MS]|[{M(Oxidation (M))|F}A]};[NP]{I|L}GGW{[YC]|[HE]};[NP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}S{[MS]|[{M(Oxidation (M))|F}A]};{[{M(Oxidation (M))|F}H]|[RQ]}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{[QS]|[NT]};[HV]S{M(Oxidation (M))|F}{[TV]|[{I|L}S]}[YG] 2.8099;2.0112;1.9125;1.7903;0.98402;0.80683;0.4873;0.069887 -;-;-;-;-;-;-;- 110 1 2.052 73487.5 0.6800000071525574 2684 4200 6885 SUDHL4_400M_050219_1,6886 SUDHL4_400M_050219_1,6886,NMGLMLSQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6887 36.271 79.0 780180.0 25 0 46900.0 + 15980 ITDKPLMP 8 100 457.7564351594002 0 457.7564269900322 PEAK CID FTMS 0 0 0 6885 537287.3125 0.1519632622330415 -2 0.0910224914550781 2 Unmodified _ITDKPLMP_ REV__ENSG00000085224|ENST00000373344|ATRX;REV__nc|ENSG00000085224|P46100-2|ATRX;REV__nc|ENSG00000085224|P46100-3|ATRX;REV__nc|ENSG00000085224|P46100-4|ATRX;REV__nc|ENSG00000085224|P46100-5|ATRX 23.1484247019978 0.3584660196589264 5 TNGVNR 6 -1 38.008 0.0 0.0 4.1607 0.0 0.0 131.09545133280056 138.05623804263908 269.1516893754397 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 TNGVNR 4.1607 - 610 + 1 2.052 50854.9 1.0 2685 4200 6885 SUDHL4_400M_050219_1,6887 SUDHL4_400M_050219_1,6887,ITDKPLMP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6888 36.274 141.0 626600.0 25 0 107190.0 + 16258 IVSAQNLLK 9 103 493.3058709667648 984.5971890003296 2 493.3065673708916 MULTI CID FTMS 0 0 0 6885 253518.453125 0.090983019937289 -2 0.0910224914550781 3 Unmodified _IVSAQNLLK_ L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;nc|ENSG999|O00370|L1_ORF2 56.17704186161178 0.0281986971544335 5 {I|L}VSAQVQ{I|L}K 9 2 + 80.773 0.0 0.0 8.2037 8.2037 88.807 0.0 0.0 0.0 36.47817481888637 3.357921019231938 3.357921019231938 3.357921019231938 0 1.242992819099939 2.0 0.0 1.2302046884880935 {I|L}VSAQVQ{I|L}K;{I|L}VSAQVQK{I|L};{I|L}VSA[AG]VQ{I|L}K;{I|L}VSA[AG]VQK{I|L};{I|L}VQGTVQ{I|L}K;{I|L}VQGTVQK{I|L};{I|L}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KT]{I|L}[PA] 8.2037;7.8626;7.2684;6.9274;4.8477;4.5067;4.1412 -;-;-;-;-;-;- 408 + 1 2.052 72691.6 1.0 2686 4200 6885 SUDHL4_400M_050219_1,6888 SUDHL4_400M_050219_1,6888,IVSAQNLLK True True IVSAQNLLK 36.273931 493.306567370892 25796506.0 6885.0 nc|ENSG999|O00370|L1_ORF2;;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;;L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense 5.144876162211101 2.0 True 9.0 False ERV PXD020620_cell_line SUDHL4_400M_050219_1 6889 36.278 214.0 408490.0 25 0 32069.0 + 17252 KLNAKLAEL 9 132 500.3131722971392 998.6117916610784 2 500.3139221072197 MULTI CID FTMS 0 0 0 6885 207137.34375 0.6468717300913862 -1 0.0641517639160156 4 Unmodified _KLNAKLAEL_ ENSG00000168906|ENST00000306434|MAT2A;ENST00000490878.1_1_2:85768733-85769182:+|nuORF;nc|ENSG00000168906|P31153-2|MAT2A 34.93206674587334 0.1032771302489716 5 K{I|L}{M(Oxidation (M))|F}{I|L}AKNT 8 6 50.246 0.0 0.0 5.0316 0.0 0.0 0.0 80.05118738345936 80.05118738345936 35.64239755696384 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.6747425010840047 0.0 K{I|L}{M(Oxidation (M))|F}{I|L}AKNT 5.0316 - 1079 + 1 2.052 70108.5 1.0 2687 4200 6885 SUDHL4_400M_050219_1,6889 SUDHL4_400M_050219_1,6889,KLNAKLAEL True True KLNAKLAEL 36.277976 500.31392210722 1491215.625 6885.0 nc|ENSG00000168906|P31153-2|MAT2A;;ENST00000490878.1_1_2:85768733-85769182:+|nuORF;;ENSG00000168906|ENST00000306434|MAT2A 4.25314458211263 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6890 36.292 800.0 323010.0 25 0 35431.0 + 17934 KQYADVEGF 9 200 528.7533521311829 1055.4921513291656 2 528.7538940310478 MULTI CID FTMS 0 0 0 6885 204588.46875 0.3375031975219501 -1 0.0641517639160156 5 Unmodified _KQYADVEGF_ ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK 99.79894945604345 0.0109923542231827 5 [KQ]YADVEG{M(Oxidation (M))|F} 9 0 + 88.22 0.0 0.0 8.3582 8.3582 86.589 0.0 0.0 0.0 0.1215715921996718 64.30146297459208 0.1215715921996718 1.5167677275049556 0 1.2887254899964358 0.0 1.3996498648046138 1.547307497191409 + + [KQ]YADVEG{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GKADVEG{M(Oxidation (M))|F};[YQ]KADVEG{M(Oxidation (M))|F};[KQ]YEGVEG{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}SKADVEG{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}GKEGVEG{M(Oxidation (M))|F};[YQ]KEGVEG{M(Oxidation (M))|F};{[DA]|[EG]}YQKVEG{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}SKEGVEG{M(Oxidation (M))|F};[KA]GYADVEG{M(Oxidation (M))|F} 8.3582;8.2145;8.0893;8.0507;8.0297;7.907;7.7818;7.7776;7.7222;7.5511 +;-;-;-;-;-;-;-;-;- + 7689 1 2.052 196073.2 0.7799999713897705 2688 4200 6885 SUDHL4_400M_050219_1,6890 SUDHL4_400M_050219_1,6890,KQYADVEGF True True KQYADVEGF 36.291808 528.753894031048 6413637.0 6885.0 nc|ENSG00000165119|P61978-3|HNRNPK;;ENSG00000165119|ENST00000376263|HNRNPK 8.427620569864908 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6891 36.295 189.0 293070.0 25 0 39160.0 20207 LLARPSSTI 9 104 479.28924900986624 956.5639450865324 2 479.2901794314384 MULTI CID FTMS 0 0 0 6885 154927.15625 1.0 0 0.0 6 Unmodified _LLARPSSTI_ ENSG00000159596|ENST00000372025|TMEM69 43.85829265575387 0.0542763391141878 5 [{I|L}A]R{I|L}[PS]ST{I|L} 9 2 + 46.353 0.0 0.0 4.8458 4.8458 79.087 0.0 0.0 0.0 4.279032320494807 16.478174818886373 4.279032320494807 1.7609125905568137 0 0.4247425010840047 1.0969100130080565 0.8494850021680094 0.0 [{I|L}A]R{I|L}[PS]ST{I|L};[{I|L}A]R[PS]{I|L}ST{I|L};[{I|L}V][Q{I|L}][PS]ST{I|L};[{I|L}A]R{I|L}[RD]T{I|L};{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}[PS]ST{I|L};[{I|L}V][Q{I|L}][RD]T{I|L};{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}[RD]T{I|L};[{I|L}A]R{I|L}WW{I|L};[{I|L}V][Q{I|L}]WW{I|L};{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}WW{I|L} 4.8458;4.6617;4.3984;4.1685;3.7983;3.7212;3.1211;2.6651;2.2178;1.6177 -;-;-;-;+;-;-;-;-;- + 100 1 2.052 48155.7 1.0 2689 4200 6885 SUDHL4_400M_050219_1,6891 SUDHL4_400M_050219_1,6891,LLARPSSTI True False IARLPSSTL 36.295435 479.290179431438 1028676.4375 6885.0 ENSG00000186185|ENST00000593135|KIF18B;;nc|ENSG00000186185|Q86Y91-6|KIF18B 1.1240721940994265 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6892 36.309 800.0 204870.0 25 0 15139.0 + 40759 VLKEIVERV 9 162 542.8395985436895 1083.6646441541789 2 542.8401977419853 MULTI CID FTMS 0 0 0 6885 88380.640625 0.9872530999357174 -1 0.0641517639160156 7 Unmodified _VLKEIVERV_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 45.739877483867886 0.0497104363764649 5 V{I|L}KE{I|L}VERV 9 0 + 82.254 0.0 0.0 7.5903 7.5903 92.181 0.0 0.0 0.0 57.05935599634515 7.422750325201406 7.422750325201406 8.927900303521312 0 0.7742275032520141 1.6989700043360187 0.3494850021680094 0.3494850021680094 + + V{I|L}KE{I|L}VERV;V{I|L}KE{I|L}V[RD]{I|L};V{I|L}V{[SA]|[TG]}{I|L}VERV;V{I|L}KE{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L};V{I|L}KV{[QN]|[E{I|L}]|[KN]}ERV;V{I|L}V{[SA]|[TG]}{I|L}V[RD]{I|L};V{I|L}KP{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))K]{I|L};V{I|L}VK{[QN]|[E{I|L}]|[KN]}ERV;V{I|L}KV{[QN]|[E{I|L}]|[KN]}[RD]{I|L};V{I|L}KHH[VP]RV 7.5903;6.7665;5.9778;5.9088;5.3056;5.1539;4.5995;4.5428;4.4817;4.4322 +;-;-;-;-;-;-;-;-;- + 1517 + 1 2.052 126414.0 0.550000011920929 2690 4200 6885 SUDHL4_400M_050219_1,6892 SUDHL4_400M_050219_1,6892,VLKEIVERV True True VLKEIVERV 36.309268 542.840197741985 478032.53125 6885.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 5.322732289632161 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6893 36.323 800.0 98957.0 25 0 7172.3 + 1890 ALWHDAENQTV 11 101 642.3047259274595 0 642.3046142458916 PEAK CID FTMS 0 0 0 6885 85087.6796875 1.0 0 0.0 8 Unmodified _ALWHDAENQTV_ ENSG00000030066|ENST00000378460|NUP160;ENST00000527126.1_1_11:47843172-47843701:-|nuORF;nc|ENSG00000030066|Q12769-3|NUP160;nc|ENSG00000030066|Q12769|NUP160 29.84058131909904 0.2294714165048734 5 QNEA 4 10 22.167 0.0 0.0 1.7283 0.0 0.0 218.1295992652641 619.2633150690061 837.3929143342702 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 QNEA 1.7283 - 107 + 1 2.052 64961.6 0.5799999833106995 2691 4200 6885 SUDHL4_400M_050219_1,6893 SUDHL4_400M_050219_1,6893,ALWHDAENQTV False True ALWHDAENQTV 36.323103 642.304614245892 457290.71875 6885.0 ENST00000527126.1_1_11:47843172-47843701:-|nuORF;;nc|ENSG00000030066|Q12769-3|NUP160;;nc|ENSG00000030066|Q12769|NUP160;;ENSG00000030066|ENST00000378460|NUP160 6.842072486877441 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6894 36.325 37.0 1149200.0 25 0 109850.0 -1 0 86 487.2751958257884 486.2679193591884 1 487.2747680544853 MULTI CID FTMS 0 0 0 6885 1445448.625 0.4965907771346432 5 -0.3608970642089844 9 5 A 1 -1 11.42 0.0 0.0 2.3485 0.0 0.0 397.2195851690501 0.0 397.2195851690501 0.0 0.1609234168570061 0.0 0.0 0 0.0 0.0 0.0 0.0 A 2.3485 - 27 + 1 2.052 38669.9 1.0 2692 4200 6885 SUDHL4_400M_050219_1,6894 SUDHL4_400M_050219_1,6894, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6895 36.329 212.0 204570.0 25 0 32374.0 -1 0 57 605.3377606222169 604.3304841556169 1 605.3381225466728 MULTI CID FTMS 0 0 0 6885 202252.109375 0.804094665256534 -1 0.0641517639160156 10 5 Y 1 -1 12.218 0.0 0.0 2.0218 0.0 0.0 423.256248171045 0.0 423.256248171045 0.0 12.21848749616356 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.0218 - 6 + 1 2.052 38641.7 1.0 2693 4200 6885 SUDHL4_400M_050219_1,6895 SUDHL4_400M_050219_1,6895, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6896 36.335 278.0 259600.0 25 0 26504.0 + 30724 RGKGRGPA 8 130 399.7380305880737 0 399.7382995486259 PEAK CID FTMS 0 0 0 6885 143822.828125 0.8253867467149428 3 -0.2205581665039062 11 Unmodified _RGKGRGPA_ REV__ENST00000574268.1_1_17:4710512-4711565:+|nuORF 2.577480529830294 0.5910327097116076 5 V 1 -1 0.71334 0.0 0.0 0.089451 0.0 0.0 416.22592582282863 279.1446932428344 695.370619065663 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.089451 - 1 + 1 2.052 63839.4 1.0 2694 4200 6885 SUDHL4_400M_050219_1,6896 SUDHL4_400M_050219_1,6896,RGKGRGPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6897 36.339 253.0 316620.0 25 0 106040.0 -1 0 101 454.2607722332281 453.2534957666281 1 454.2612792849541 MULTI CID FTMS 0 0 0 6885 143517.96875 0.6007805899431691 6 -0.4392166137695312 12 5 {M(Oxidation (M))|F} 1 -1 11.109 0.0 0.0 2.451 0.0 0.0 288.1744837810797 0.0 288.1744837810797 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.451 - 23 + 1 2.052 70322.5 1.0 2695 4200 6885 SUDHL4_400M_050219_1,6897 SUDHL4_400M_050219_1,6897, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6899 36.344 45.0 1772200.0 25 0 411590.0 + 20531 LLLRRTQLL 9 82 375.9198606801807 1124.737752640742 3 375.9203063845634 MULTI CID FTMS 0 0 0 6898 837888.875 0.3066726807616337 2 -0.134246826171875 1 Unmodified _LLLRRTQLL_ ENSG00000255181|ENST00000542437|CCDC166 13.614867670302877 0.4681447649821485 5 {I|L}WV{I|L}{I|L} 5 6 35.918 0.0 0.0 3.1934 0.0 0.0 482.3315907209 0.0 482.3315907209 0.0 23.927900303521312 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 {I|L}WV{I|L}{I|L} 3.1934 - 24 1 2.075 69940.1 1.0 2696 4201 6898 SUDHL4_400M_050219_1,6899 SUDHL4_400M_050219_1,6899,LLLRRTQLL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6900 36.346 89.0 571870.0 25 0 142670.0 -1 RMLDNLVRM 9 49 582.304369369439 1162.594185805678 2 582.3049804568291 MULTI CID FTMS 0 0 0 6898 412982.75 0.202570955985391 2 -0.134246826171875 2 Oxidation (M) _RMLDNLVRM(Oxidation (M))_ ENST00000508684.5_1_4:2900928-2901297:+|nuORF;ENST00000509039.5_1_4:2877642-2901297:+|nuORF 8.155526934196011 0.6299788542272896 5 [VG]HE[KP]D 7 -1 33.447 0.0 0.0 2.8769 0.0 0.0 0.0 397.2025850885376 397.2025850885376 4.506594505464179 0.0 0.0 0.0 0 0.8252574989159953 2.0 0.0 0.0 [VG]HE[KP]D 2.8769 - 33 + 1 2.075 43705.4 1.0 2697 4201 6898 SUDHL4_400M_050219_1,6900 SUDHL4_400M_050219_1,6900,RMLDNLVRM False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6901 36.348 73.0 708140.0 25 0 72649.0 + 31128 RLMNDMTAV 9 66 525.7568132116102 1049.4990734900202 2 525.7573730349541 MULTI CID FTMS 0 0 0 6898 654921.875 0.1666687661801712 -2 0.1504631042480468 3 Unmodified _RLMNDMTAV_ ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1 38.17557092003332 0.0854718145212029 5 [TA][WR]DMTAV 9 4 + 60.3 0.0 0.0 5.7456 5.7456 80.333 0.0 0.0 0.0 0.6808256164617887 13.46787486224656 0.6808256164617887 0.6808256164617887 0 1.0 1.154901959985743 0.6861818737241735 0.3807196863200844 [TA][WR]DMTAV;[R{I|L}]MNDMTAV;[R{I|L}]MGGDMTAV;[TA][WR]DMG[{I|L}T];[R{I|L}]MNDMG[{I|L}T];[R{I|L}]MGGDMG[{I|L}T];Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D[WR][PG] 5.7456;5.6807;4.8034;3.1034;3.0385;2.1611;1.3274 -;+;-;-;-;-;- + 110 1 2.075 47435.1 1.0 2698 4201 6898 SUDHL4_400M_050219_1,6901 SUDHL4_400M_050219_1,6901,RLMNDMTAV True True RLMNDMTAV 36.348026 525.757373034954 38345188.0 6898.0 nc|ENSG00000120694|Q92598-4|HSPH1;;nc|ENSG00000120694|Q92598-2|HSPH1;;ENSG00000120694|ENST00000320027|HSPH1;;nc|ENSG00000120694|Q92598-3|HSPH1 6.667411963144938 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6902 36.349 58.0 967070.0 25 0 105300.0 + 9278 FIAPTGHSL 9 80 471.7557328444134 941.4969127556268 2 472.2571899294853 MULTI CID FTMS 0 0 0 6898 350231.03125 0.6922099251405571 -1 0.0863113403320312 4 Unmodified _FIAPTGHSL_ ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11 57.47134341890925 0.0274820932774257 5 [{I|L}A]GNGTPA{[QN]|[E{I|L}]|[KN]} 10 7 + 42.641 0.0 0.0 4.5291 4.5291 78.379 0.0 0.0 0.0 1.865033352794789 1.865033352794789 1.865033352794789 1.865033352794789 0 0.8494850021680094 1.3010299956639813 0.8494850021680094 0.0 [{I|L}A]GNGTPA{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APTGHTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APTGHS{I|L};[{I|L}A]GGGGTPA{[QN]|[E{I|L}]|[KN]};[Q{I|L}]NGTPA{[QN]|[E{I|L}]|[KN]};[Q{I|L}]GGGTPA{[QN]|[E{I|L}]|[KN]} 4.5291;4.331;3.9771;3.5557;3.467;2.4889 -;-;+;-;-;- + 209 1 2.075 46954.1 1.0 2699 4201 6898 SUDHL4_400M_050219_1,6902 SUDHL4_400M_050219_1,6902,FIAPTGHSL True True FIAPTGHSL 36.349472 471.7559 11266986.0 6898.0 nc|ENSG00000125354|Q14141-4|SEPTIN6;;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;;nc|ENSG00000125354|Q14141|SEPTIN6;;ENSG00000125354|ENST00000394610|SEPTIN6;;nc|ENSG00000125354|Q14141-3|SEPTIN6;;ENSG00000138758|ENST00000264893|SEPTIN11 5.985707759857178 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6903 36.353 184.0 538730.0 25 0 47431.0 + 20155 LKPGILPVPK 10 130 531.357428828523 1060.700304723846 2 531.3578369021416 MULTI CID FTMS 0 0 0 6898 321963.0625 0.0426740652147778 23 -1.0913200378417969 5 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 18.721224879955976 0.5334180411911432 5 K{I|L}AP{I|L}VKD{I|L} 9 -1 68.664 0.0 0.0 6.4734 0.0 0.0 0.0 80.05117975406483 80.05117975406483 47.71652514092061 0.0 0.0 0.0 0 2.079689690656103 0.0 1.174742501084005 0.0 K{I|L}AP{I|L}VKD{I|L} 6.4734 - 356 + 1 2.075 77942.2 1.0 2700 4201 6898 SUDHL4_400M_050219_1,6903 SUDHL4_400M_050219_1,6903,LKPGILPVPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6904 36.367 800.0 117280.0 25 0 31720.0 -1 0 45 1094.1222123739014 3279.3448077219045 3 1094.456835925579 MULTI CID FTMS 0 0 0 6898 206588.78125 0.8149022343416147 -1 0.0863113403320312 6 5 C 1 -1 6.9897 0.0 0.0 0.21314 0.0 0.0 2262.817728522616 910.4718721979124 3173.2896007205286 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.21314 - 21 + 1 2.075 89676.4 0.6700000166893005 2701 4201 6898 SUDHL4_400M_050219_1,6904 SUDHL4_400M_050219_1,6904, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6905 36.37 180.0 277380.0 25 0 33159.0 + 42774 VVIGSHAAF 9 76 450.75091243264126 899.4872719320825 2 450.7504150271416 MULTI CID FTMS 0 0 0 6898 191282.90625 1.0 0 0.0 7 Unmodified _VVIGSHAAF_ ENSG00000105404|ENST00000222008|RABAC1;ENST00000595226.1_1_19:42461000-42461518:-|nuORF 32.116972079565 0.1225432171549407 5 VV[HV]{I|L}A 6 5 36.923 0.0 0.0 4.1049 0.0 0.0 0.0 278.0889986627563 278.0889986627563 23.428637390930263 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 VV[HV]{I|L}A 4.1049 - 128 + 1 2.075 44887.2 1.0 2702 4201 6898 SUDHL4_400M_050219_1,6905 SUDHL4_400M_050219_1,6905,VVIGSHAAF True True VVIGSHAAF 36.37038 450.750415027142 1019481.875 6898.0 ENST00000595226.1_1_19:42461000-42461518:-|nuORF;;ENSG00000105404|ENST00000222008|RABAC1 4.463699499766032 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6906 36.378 398.0 186850.0 25 0 25370.0 -1 LIHEMCHAA 9 117 541.2489327954519 1080.4833126577037 2 541.2483398318291 MULTI CID FTMS 0 0 0 6898 163516.671875 1.0 0 0.0 8 Carbamidomethyl (C) _LIHEMC(Carbamidomethyl (C))HAA_ ENSG00000147174|ENST00000373696|GCNA;ENST00000471950.1_1_X:70828916-70832410:+|nuORF 13.50788311687929 0.4710407108020397 5 {I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AAE 7 -1 33.077 0.0 0.0 3.0613 0.0 0.0 0.0 320.0373934381469 320.0373934381469 17.39023842381954 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AAE 3.0613 - 210 + 1 2.075 60836.8 1.0 2703 4201 6898 SUDHL4_400M_050219_1,6906 SUDHL4_400M_050219_1,6906,LIHEMCHAA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6907 36.382 267.0 256740.0 25 0 22926.0 30361 RAGKVAHS 8 119 413.2390174549228 824.4634819766457 2 413.2389099001884 MULTI CID FTMS 0 0 0 -1 0 9 Unmodified _RAGKVAHS_ ENST00000560141.2_1_15:45021411-45021504:+|nuORF 8.593279151180031 0.7721714526254883 5 Y 1 8 10.969 0.0 0.0 1.3305 0.0 0.0 643.3895511678551 0.0 643.3895511678551 0.0 1.2705349580951868 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3305 - 14 + 1 2.075 59464.0 1.0 2704 4201 6898 SUDHL4_400M_050219_1,6907 SUDHL4_400M_050219_1,6907,RAGKVAHS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6908 36.391 510.0 176660.0 25 0 11730.0 + 17322 KLVDEEPQL 9 128 535.7897602661576 1069.564967599115 2 535.7904540896416 MULTI CID FTMS 0 0 0 6898 123389.6875 0.9175431824873288 -1 0.0863113403320312 10 Unmodified _KLVDEEPQL_ ENSG00000033050|ENST00000287844|ABCF2;ENST00000465687.1_1_3:88367908-88368169:+|nuORF;nc|ENSG00000285292|Q9UG63-2|ABCF2 55.50274090549119 0.0285720310785888 5 {I|L}{I|L}[QT]EEPQ{I|L} 9 3 + 60.076 0.0 0.0 5.6169 5.6169 79.567 0.0 0.0 0.0 0.4343228841530333 7.382703442066756 0.4343228841530333 0.4343228841530333 0 1.1549471895720984 1.6989700043360187 0.7134679910804405 0.0 {I|L}{I|L}[QT]EEPQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}KVEEPQ{I|L};[K{I|L}]DVEEPQ{I|L};[K{I|L}]VDEEPQ{I|L};[{I|L}A]G[{I|L}T]EEPQ{I|L};[{I|L}A][TA]VEEPQ{I|L};{I|L}{I|L}[QT]EEP[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}KVEEP[AG]{I|L};[K{I|L}]DVEEP[AG]{I|L};[Q{I|L}][{I|L}T]EEPQ{I|L} 5.6169;5.5763;5.5704;5.2186;5.0613;4.8288;4.756;4.7153;4.7095;4.6539 -;-;-;+;-;-;-;-;-;- + 852 1 2.075 72553.0 1.0 2705 4201 6898 SUDHL4_400M_050219_1,6908 SUDHL4_400M_050219_1,6908,KLVDEEPQL True True KLVDEEPQL 36.391451 535.790454089642 8149397.5 6898.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2;;ENST00000465687.1_1_3:88367908-88368169:+|nuORF 5.209818045298259 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6909 36.405 800.0 93061.0 25 0 6039.4 + 42025 VQRVASVMQEY 11 105 655.331623652837 1308.648694372474 2 655.3315307497978 MULTI CID FTMS 0 0 0 6898 111570.890625 1.0 0 0.0 11 Unmodified _VQRVASVMQEY_ ENSG00000106588|ENST00000223321|PSMA2;ENST00000411875.1_1_7:42961455-42966220:-|nuORF;ENST00000433579.1_1_7:42952135-42964395:-|nuORF 18.721224879955976 0.6457238982085786 5 [VG]{[QV]|[N{I|L}]|[RA]|[KV]}VASVMAGEY 13 4 + 47.821 0.0 0.0 3.6542 3.6542 76.012 0.0 0.0 0.0 1.189961658517987 36.56134326499058 1.189961658517987 1.870866433571436 0 0.5 1.5228787452803376 0.0 0.0 [VG]{[QV]|[N{I|L}]|[RA]|[KV]}VASVMAGEY;[VG]{[QV]|[N{I|L}]|[RA]|[KV]}VASVMQEY;[AG][RV]VASVMAGEY;[AG][RV]VASVMQEY;[VG]CEV[RK]VAGEY;[VG]{[QV]|[N{I|L}]|[RA]|[KV]}VASMVAGEY;[VG]CEV[RK]VQEY;[AG]MEV[RK]VAGEY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MV[RK]VAGEY;[VG]{[QV]|[N{I|L}]|[RA]|[KV]}VASMVQEY 3.6542;3.5113;3.5023;3.3593;3.3297;3.2896;3.1891;3.1778;3.1693;3.1467 -;-;-;-;-;-;-;-;-;- 580 1 2.075 60258.2 0.6399999856948853 2706 4201 6898 SUDHL4_400M_050219_1,6909 SUDHL4_400M_050219_1,6909,VQRVASVMQEY False True VQRVASVMQEY 36.405288 655.331530749798 475776.59375 6898.0 ENST00000433579.1_1_7:42952135-42964395:-|nuORF;;ENSG00000106588|ENST00000223321|PSMA2;;ENST00000411875.1_1_7:42961455-42966220:-|nuORF 5.84575096766154 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6910 36.408 133.0 304490.0 25 0 12890.0 + 12168 GQPDISRPF 9 85 508.7616100309671 1015.508667128734 2 508.7611572146416 MULTI CID FTMS 0 0 0 6898 139675.3125 0.3319378350209673 12 -0.6127853393554688 12 Unmodified _GQPDISRPF_ ENSG00000102786|ENST00000311234|INTS6;ENST00000504674.1_1_5:39720798-39721572:-|nuORF;nc|ENSG00000102786|Q9UL03-3|INTS6 16.149105407346934 0.3995459350917656 5 {[QG]|[NA]}PD{I|L}A 6 4 28.148 0.0 0.0 2.7718 0.0 0.0 0.0 431.2146395318969 431.2146395318969 13.835528910225037 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {[QG]|[NA]}PD{I|L}A 2.7718 - 75 + 1 2.075 38917.5 1.0 2707 4201 6898 SUDHL4_400M_050219_1,6910 SUDHL4_400M_050219_1,6910,GQPDISRPF False True GQPDISRPF 36.407978 508.761157214642 11743223.0 6898.0 ENSG00000102786|ENST00000311234|INTS6;;nc|ENSG00000102786|Q9UL03-3|INTS6;;ENST00000504674.1_1_5:39720798-39721572:-|nuORF 5.322946548461914 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6911 36.414 248.0 242530.0 25 0 21347.0 + 34288 SLQVSYYGL 9 103 515.2669879267542 1028.5194229203082 2 515.2692138552666 MULTI CID FTMS 0 0 0 6898 140268.65625 0.7053533805355431 -7 0.268310546875 13 Unmodified _SLQVSYYGL_ REV__ENST00000552283.5_1_12:102470610-102471120:-|nuORF 18.13498045792455 0.3457906370836843 5 Y 1 -1 12.218 0.0 0.0 1.188 0.0 0.0 847.4449885714786 0.0 847.4449885714786 0.0 0.4357508785945008 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.188 + + 41 + 1 2.075 52210.6 1.0 2708 4201 6898 SUDHL4_400M_050219_1,6911 SUDHL4_400M_050219_1,6911,SLQVSYYGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6912 36.418 213.0 332880.0 25 0 25767.0 + 10681 FVTSAALS 8 117 398.21589861888566 794.4172443045713 2 398.2163574099541 MULTI CID FTMS 0 0 0 6898 138507.265625 0.7284287439470615 -4 0.195953369140625 14 Unmodified _FVTSAALS_ REV__ENST00000306910.8_1_19:58929128-58929233:+|nuORF 2.577480529830294 0.808687252328423 5 V 1 -1 8.4949 0.0 0.0 1.0693 0.0 0.0 677.3382018014448 0.0 677.3382018014448 0.0 7.235790156711097 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0693 + + 17 + 1 2.075 57112.6 1.0 2709 4201 6898 SUDHL4_400M_050219_1,6912 SUDHL4_400M_050219_1,6912,FVTSAALS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6914 36.424 162.0 502730.0 25 0 56992.0 + 1303 AIVDKVPSV 9 100 464.27911546026814 926.5436779873364 2 464.2791931033134 MULTI CID FTMS 0 0 0 6913 240429.796875 0.0516364784710194 6 -0.3762130737304687 1 Unmodified _AIVDKVPSV_ ENSG00000181789|ENST00000314797|COPG1 38.17557092003332 0.0854718145212029 5 [{I|L}A]V{[QD]|[EN]|[WG]|[KD]|[RS]}VPSV 9 0 + 44.949 0.0 0.0 4.8512 4.8512 87.786 0.0 0.0 0.0 23.71355677715393 6.175500476251614 6.175500476251614 10.164573061857986 0 1.403598431600422 2.0 0.4291746928241126 0.0 + + [{I|L}A]V{[QD]|[EN]|[WG]|[KD]|[RS]}VPSV;[{I|L}A]V{[DS]|[MA]|[CV]|TT}VV[QP];[{I|L}A]V{[DS]|[MA]|[CV]|TT}V[QP]V;[{I|L}A]V{[DS]|[MA]|[CV]|TT}VVG[PA];[{I|L}A][KP]HP[HK];[{I|L}A]V{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}T][PA];[KP]A{I|L}HP[HK];[KP]{I|L}AHP[HK];[PA]K{I|L}HP[HK] 4.8512;3.7542;3.4293;3.1596;3.0688;1.5962;1.0411;0.9859;0.16375 +;-;-;-;-;-;-;-;- + 363 + 1 2.075 67057.8 1.0 2710 4202 6913 SUDHL4_400M_050219_1,6914 SUDHL4_400M_050219_1,6914,AIVDKVPSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6915 36.437 800.0 123840.0 25 0 20870.0 + 7943 ELRRVVKLL 9 121 563.3769286679653 1124.7393044027306 2 563.3773071169853 MULTI CID FTMS 0 0 0 6913 59308.890625 0.1141368059174334 3 -0.1959877014160156 2 Unmodified _ELRRVVKLL_ REV__ENSG00000196090|ENST00000373187|PTPRT;REV__nc|ENSG00000196090|O14522-1|PTPRT 4.189502756095605 0.7684307469601125 5 Y 1 -1 11.99 0.0 0.0 1.066 0.0 0.0 943.66537359394 0.0 943.66537359394 0.0 2.525749891599532 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.066 - 110 + 1 2.075 80643.2 0.7400000095367432 2711 4202 6913 SUDHL4_400M_050219_1,6915 SUDHL4_400M_050219_1,6915,ELRRVVKLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6916 36.439 44.0 1214600.0 25 0 201540.0 + 9279 FIAPTGHSL 9 68 471.7557328444134 941.4969127556268 2 471.7559997439384 MULTI CID FTMS 0 0 0 6913 1126596.375 1.0 0 0.0 3 Unmodified _FIAPTGHSL_ ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11 70.71552829651908 0.0208223590022201 5 [{I|L}A][NG]GTPA{[QN]|[E{I|L}]|[KN]} 10 7 + 48.311 0.0 0.0 5.1313 5.1313 81.01 0.0 0.0 0.0 2.723703006718594 2.723703006718594 2.723703006718594 2.723703006718594 0 0.7742275032520141 1.0457574905606752 1.1237125054200234 0.0 [{I|L}A][NG]GTPA{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APTG[HT]V;[{I|L}A][NG]P{[SA]|[TG]}A{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{[SA]|[TG]}P[HT]V;[{I|L}A][NG]P[QT]{[QN]|[E{I|L}]|[KN]};[PA][HS]AS{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[PA][HS]S{I|L}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[VS]TG[YR];[PA][HS]SA{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}A][HN]D{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 5.1313;4.842;2.7942;1.915;1.2781;1.2567;0.88261;0.7542;0.56287;0.5387 -;-;-;-;-;-;-;-;-;- 167 1 2.075 47168.8 1.0 2712 4202 6913 SUDHL4_400M_050219_1,6916 SUDHL4_400M_050219_1,6916,FIAPTGHSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6917 36.44 58.0 1305000.0 25 0 166480.0 + 33148 SEVMGEPHL 9 93 499.7340657555159 997.453578577832 2 499.7344543337822 MULTI CID FTMS 0 0 0 6913 905392.0 0.6069354925072149 -1 0.0785980224609375 4 Unmodified _SEVMGEPHL_ ENSG00000132963|ENST00000380842|POMP 34.10243960390752 0.1078313939113124 5 {[ES]|[DT]|[{I|L}C]}VM{[DA]|[EG]}P{I|L}H 9 2 + 36.736 0.0 0.0 3.683 3.683 79.576 0.0 0.0 0.0 21.50306282292333 5.878369139881826 5.878369139881826 5.228787452803374 0 1.0 0.0 0.4247425010840047 0.0 {[ES]|[DT]|[{I|L}C]}VM{[DA]|[EG]}P{I|L}H;{[ES]|[DT]|[{I|L}C]}VM{[DA]|[EG]}{I|L}PH;[W{M(Oxidation (M))|F}]{I|L}M[HQ]H 3.683;3.1588;0.66076 -;-;- 148 + 1 2.075 61414.7 1.0 2713 4202 6913 SUDHL4_400M_050219_1,6917 SUDHL4_400M_050219_1,6917,SEVMGEPHL True True SEVMGEPHL 36.440048 499.734454333782 8397531.0 6913.0 ENSG00000132963|ENST00000380842|POMP 8.138922055562338 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6918 36.443 170.0 405530.0 25 0 37837.0 + 36153 SVVDISQQY 9 105 519.757835879771 1037.501118826342 2 519.7588378787041 MULTI CID FTMS 0 0 0 6913 345607.25 1.0 0 0.0 5 Unmodified _SVVDISQQY_ ENSG00000168303|ENST00000306984|MPLKIP 42.09456458481378 0.0639583784996157 5 [VS]VD{I|L} 5 4 32.107 0.0 0.0 3.0946 0.0 0.0 0.0 521.197382824642 521.197382824642 13.350905569634236 0.0 0.0 0.0 0 0.0 2.0 0.5451140161145328 0.0 + [VS]VD{I|L} 3.0946 + + 161 1 2.075 56876.5 1.0 2714 4202 6913 SUDHL4_400M_050219_1,6918 SUDHL4_400M_050219_1,6918,SVVDISQQY True True SVVDISQQY 36.443375 519.758837878704 1576698.0 6913.0 ENSG00000168303|ENST00000306984|MPLKIP 4.729700803756714 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6919 36.446 152.0 350510.0 25 0 23423.0 + 2054 APLPPHLPGA 10 80 485.2792959137977 968.5440388943954 2 485.2790710330009 MULTI CID FTMS 0 0 0 6913 259244.546875 0.9035965008208348 11 -0.5341873168945312 6 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 32.116972079565 0.2470863257317063 5 [PA]{I|L}Y{I|L}P 6 5 39.359 0.0 0.0 4.0637 0.0 0.0 0.0 311.13758072472666 311.13758072472666 24.42348741261036 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [PA]{I|L}Y{I|L}P 4.0637 - 267 1 2.075 44241.3 1.0 2715 4202 6913 SUDHL4_400M_050219_1,6919 SUDHL4_400M_050219_1,6919,APLPPHLPGA False True False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 6920 36.45 215.0 348380.0 25 0 38699.0 + 32424 SAAQPGVAF 9 118 424.219033696234 846.4235144592681 2 424.2191955447197 MULTI CID FTMS 0 0 0 6913 221410.4375 0.5179568629411907 -2 0.1649093627929687 7 Unmodified _SAAQPGVAF_ ENSG00000108061|ENST00000369452|SHOC2;nc|ENSG00000108061|Q9UQ13-2|SHOC2 32.30548876998284 0.1201446275138228 5 {[SA]|[TG]}AQ 4 5 23.331 0.0 0.0 2.7564 0.0 0.0 0.0 486.2367218169431 486.2367218169431 2.361597049909601 0.0 0.0 0.0 0 0.4247425010840047 1.3010299956639813 0.1803115997617927 0.0 + {[SA]|[TG]}AQ 2.7564 + + 218 1 2.075 61374.6 1.0 2716 4202 6913 SUDHL4_400M_050219_1,6920 SUDHL4_400M_050219_1,6920,SAAQPGVAF True True SAAQPGVAF 36.450446 424.21919554472 6778083.5 6913.0 ENSG00000108061|ENST00000369452|SHOC2;;nc|ENSG00000108061|Q9UQ13-2|SHOC2 6.600417455037435 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6921 36.464 800.0 137950.0 25 0 12769.0 + 16952 KIMDRFEEV 9 122 583.7970295190197 0 583.7969848513603 PEAK CID FTMS 0 0 0 6913 126524.625 1.0 0 0.0 8 Unmodified _KIMDRFEEV_ chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;ENSG00000013810|ENST00000313288|TACC3;ENST00000470808.1_1_4:1741140-1742845:+|nuORF 32.037481411007896 0.1008621704287274 5 {I|L}MD{I|L} 4 6 28.73 0.0 0.0 2.4649 0.0 0.0 128.09519735536952 562.2403048150999 690.3355021704695 0.0 0.0 0.0 0.0 0 1.1307196863200843 0.0 0.0 0.0 {I|L}MD{I|L} 2.4649 - 80 + 1 2.075 87207.5 0.6299999952316284 2717 4202 6913 SUDHL4_400M_050219_1,6921 SUDHL4_400M_050219_1,6921,KIMDRFEEV True True KIMDRFEEV 36.464278 583.79698485136 591839.9375 6913.0 chr4:1731301-1735279|47|17.0|0.61|4.79|+|ENST00000652770|TACC3,TACC3;;ENSG00000013810|ENST00000313288|TACC3;;chr4:1740002-1740832|13|33.23|0.17|7.63|+|2|TACC3,None|1;;ENST00000470808.1_1_4:1741140-1742845:+|nuORF;;chr4:1740002-1740828|13|35.77|0.33|6.76|+|2|TACC3,None|1 5.333645343780518 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6922 36.473 521.0 151040.0 25 0 28475.0 + -1 IVNDACFCL 9 123 556.2488534130712 1110.4831538929425 2 556.2490112185478 MULTI CID FTMS 0 0 0 6913 104444.34375 1.0 0 0.0 9 2 Carbamidomethyl (C) _IVNDAC(Carbamidomethyl (C))FC(Carbamidomethyl (C))L_ REV__ENSG00000127780|ENST00000248384|OR1E2;REV__ENSG00000180016|ENST00000322608|OR1E1 12.531546534597751 0.4974689918368763 5 [{I|L}V]N 3 -1 32.447 0.0 0.0 2.9219 0.0 0.0 0.0 781.2648976275703 781.2648976275703 17.66589350960075 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}V]N 2.9219 + + 155 1 2.075 66345.3 1.0 2718 4202 6913 SUDHL4_400M_050219_1,6922 SUDHL4_400M_050219_1,6922,IVNDACFCL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6924 36.491 800.0 251430.0 25 0 30355.0 -1 AWRNMMPENTV 11 139 690.8050068414809 1379.5954607497615 2 690.8064453005791 MULTI CID FTMS 0 0 0 6923 173518.3125 0.6725513544508159 2 -0.1403388977050781 1 2 Oxidation (M) _AWRNM(Oxidation (M))M(Oxidation (M))PENTV_ ENSG00000144647|ENST00000344697|POMGNT2 16.149105407346934 0.6992268271266642 5 {NN|[MP]|[D{I|L}]|[EV]}ESN[KA]DW{I|L}K 11 -1 68.721 0.0 0.0 4.9812 0.0 0.0 0.0 76.9331483429352 76.9331483429352 49.42403881706778 0.0 0.0 0.0 0 0.0 2.0 0.9476212463643424 0.805462187404089 {NN|[MP]|[D{I|L}]|[EV]}ESN[KA]DW{I|L}K 4.9812 - 3475 1 2.089 147206.5 0.800000011920929 2719 4203 6923 SUDHL4_400M_050219_1,6924 SUDHL4_400M_050219_1,6924,AWRNMMPENTV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6925 36.495 192.0 639670.0 25 0 65536.0 + 22708 LQFPVGRVH 9 102 351.53808891897256 1051.5924373571177 3 351.5380432009697 MULTI CID FTMS 0 0 0 6923 275672.625 0.3097752171932205 -2 0.134246826171875 2 Unmodified _LQFPVGRVH_ ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 20.453626601364224 0.2830276176381075 5 [VP][RD]VP{M(Oxidation (M))|F} 7 6 27.306 0.0 0.0 2.5966 0.0 0.0 0.0 238.11940971727896 238.11940971727896 13.326605085005204 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 [VP][RD]VP{M(Oxidation (M))|F} 2.5966 - 56 1 2.089 104604.1 1.0 2720 4203 6923 SUDHL4_400M_050219_1,6925 SUDHL4_400M_050219_1,6925,LQFPVGRVH False True LQFPVGRVH 36.494861 351.53804320097 9672150.0 6923.0 nc|ENSG00000246705|Q9BTM1-2|H2AJ;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000274997|ENST00000377459|H2AC12;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000196747|ENST00000358739|H2AC13;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000184270|ENST00000331128|H2AC21;;ENSG00000276903|ENST00000613174|H2AC16;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000180573|ENST00000377791|H2AC6;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000246705|ENST00000544848|H2AJ 2.6046295116345086 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6926 36.501 323.0 274450.0 25 0 27693.0 -1 0 135 377.7157925668521 0 377.7157470583916 PEAK CID FTMS 0 0 0 6923 176526.015625 0.7807026393894059 1 -0.0752639770507812 3 5 {I|L}RVG 4 -1 8.9893 0.0 0.0 1.1931 0.0 0.0 147.0687718984364 178.0511873834594 325.11995928189583 0.0 0.0 0.0 0.0 0 0.6069758080123702 0.0 0.0 0.4247425010840047 {I|L}RVG 1.1931 - 25 + 1 2.089 71135.0 1.0 2721 4203 6923 SUDHL4_400M_050219_1,6926 SUDHL4_400M_050219_1,6926, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6927 36.504 180.0 373070.0 25 0 23195.0 + 36732 TQSPSLVQY 9 99 511.7662424661521 1021.517931999104 2 511.7623168826103 MULTI CID FTMS 0 0 0 6923 177701.171875 0.1123961808794927 -3 0.2205581665039062 4 Unmodified _TDRQIVQY_ nc|ENSG00000143569|Q14157-1|UBAP2L;nc|ENSG00000143569|Q14157-4|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L;nc|ENSG00000143569|Q14157-3|UBAP2L;ENSG00000143569|ENST00000428931|UBAP2L 34.10243960390752 0.3329570729325616 5 {[TV]|[{I|L}S]}PSN{M(Oxidation (M))|F}ASTV 10 9 + 36.519 0.0 0.0 3.575 3.575 74.542 0.0 0.0 0.0 1.0473535052001282 7.314309196763695 1.0473535052001282 1.0473535052001282 0 0.5796896906561032 0.744727494896694 0.8494850021680094 0.0 {[TV]|[{I|L}S]}PSN{M(Oxidation (M))|F}ASTV;[PS]{I|L}SN{M(Oxidation (M))|F}ASTV;{[TV]|[{I|L}S]}PSGG{M(Oxidation (M))|F}ASTV;{[QV]|[N{I|L}]|[RA]|[KV]}[PS]S{M(Oxidation (M))|F}ASTV;[VG]A[PS]S{M(Oxidation (M))|F}ASTV;[PS]{I|L}SGG{M(Oxidation (M))|F}ASTV;[VG]{NN|[MP]|[D{I|L}]|[EV]}N{M(Oxidation (M))|F}ASTV;[PS][WK]{M(Oxidation (M))|F}ASTV;{[TV]|[{I|L}S]}PSNP[HA]TV;[PS]{I|L}SNP[HA]TV 3.575;3.4725;2.6779;2.6099;2.5841;2.5753;2.4823;2.4616;2.4543;2.3517 -;-;-;-;-;-;-;-;-;- 1227 1 2.089 55622.1 1.0 2722 4203 6923 SUDHL4_400M_050219_1,6927 SUDHL4_400M_050219_1,6927,TDRQIVQY False False TQSPSLVQY 36.504227 511.76231688261 893245.4375 6923.0 nc|ENSG00000143569|Q14157-1|UBAP2L;;nc|ENSG00000143569|Q14157-4|UBAP2L;;nc|ENSG00000143569|Q14157-5|UBAP2L;;nc|ENSG00000143569|Q14157-3|UBAP2L;;ENSG00000143569|ENST00000428931|UBAP2L 4.809115727742513 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6928 36.512 407.0 247940.0 25 0 23124.0 -1 HEISKIAMGM 10 126 574.7750381162201 1147.53552329924 2 574.7762939333916 MULTI CID FTMS 0 0 0 6923 109009.5859375 1.0 0 0.0 5 2 Oxidation (M) _HEISKIAM(Oxidation (M))GM(Oxidation (M))_ ENSG00000158301|ENST00000483720|GPRASP2;ENSG00000198932|ENST00000537097|GPRASP1 13.90604991867851 0.6142120002215601 5 [H{I|L}]{I|L}GSS{I|L} 7 -1 38.172 0.0 0.0 3.3264 0.0 0.0 0.0 437.11434271057993 437.11434271057993 2.8520664593344875 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 1.1307196863200843 0.0 [H{I|L}]{I|L}GSS{I|L} 3.3264 - 735 1 2.089 78262.1 1.0 2723 4203 6923 SUDHL4_400M_050219_1,6928 SUDHL4_400M_050219_1,6928,HEISKIAMGM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6929 36.525 800.0 55562.0 25 0 3450.5 -1 0 53 874.9054764860379 1747.7964000388756 2 875.8951904177666 MULTI CID FTMS 0 0 0 6923 79666.3515625 0.0530481539169419 35 -1.7646980285644531 6 5 ENAD{I|L}[NP]{[QN]|[E{I|L}]|[KN]} 9 -1 24.103 0.0 0.0 1.379 0.0 0.0 734.3725453107437 0.0 734.3725453107437 0.0 6.998643667695749 0.0 0.0 0 0.0 0.0 0.0 0.0 ENAD{I|L}[NP]{[QN]|[E{I|L}]|[KN]} 1.379 - 93 1 2.089 37656.7 0.5199999809265137 2724 4203 6923 SUDHL4_400M_050219_1,6929 SUDHL4_400M_050219_1,6929, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6930 36.531 287.0 341170.0 25 0 29831.0 + 31244 RLTEEFQNV 9 113 568.2914695799908 1134.5683862267815 2 568.2909423708916 MULTI CID FTMS 0 0 0 6923 232575.375 0.7085393881631729 -1 0.0556488037109375 7 Unmodified _RLTEEFQNV_ ENSG00000122687|ENST00000242257|MRM2;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;ENST00000486040.1_1_7:2274759-2277695:-|nuORF 36.506200033944 0.094635877243972 5 [R{I|L}]TEE{M(Oxidation (M))|F}QNV 9 0 + 54.931 0.0 0.0 4.8416 4.8416 86.58 0.0 0.0 0.0 10.016894462103991 29.74169167218633 10.016894462103991 9.208187539523747 0 0.6989700043360187 0.7958800173440752 0.6549471895720984 0.0 + + [R{I|L}]TEE{M(Oxidation (M))|F}QNV;[R{I|L}]TEE{M(Oxidation (M))|F}[AG]NV;[KG][KG]EE{M(Oxidation (M))|F}QNV;[AG]DKKE{M(Oxidation (M))|F}QNV;[AG]NV{[WT]|[RM]}{M(Oxidation (M))|F}QNV;[KG]E[KG]E{M(Oxidation (M))|F}QNV;{[QD]|[EN]|[WG]|[KD]|[RS]}KKE{M(Oxidation (M))|F}QNV;[VS]Q[KG]E{M(Oxidation (M))|F}QNV;[KG][KG]EE{M(Oxidation (M))|F}[AG]NV;[AG]DKKE{M(Oxidation (M))|F}[AG]NV 4.8416;4.03;3.5427;3.5391;3.0595;3.0121;2.9709;2.9267;2.735;2.7313 +;-;-;-;-;-;-;-;-;- + 882 1 2.089 82060.2 1.0 2725 4203 6923 SUDHL4_400M_050219_1,6930 SUDHL4_400M_050219_1,6930,RLTEEFQNV True True RLTEEFQNV 36.53065 568.290942370892 1722632.875 6923.0 ENST00000486040.1_1_7:2274759-2277695:-|nuORF;;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;;ENSG00000122687|ENST00000242257|MRM2 6.326309680938721 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6931 36.544 800.0 217200.0 25 0 64698.0 -1 0 114 613.3557519051701 612.3484754385701 1 613.3552734255791 MULTI CID FTMS 0 0 0 6923 201776.703125 1.0 0 0.0 8 5 [{I|L}A]{I|L}P 4 -1 39.966 0.0 0.0 6.5267 0.0 0.0 0.0 215.06756006412343 215.06756006412343 16.665090889956673 0.0 0.0 0.0 0 1.1549471895720984 1.5228787452803376 0.0 0.0 [{I|L}A]{I|L}P 6.5267 - 117 + 1 2.089 130996.4 0.8299999833106995 2726 4203 6923 SUDHL4_400M_050219_1,6931 SUDHL4_400M_050219_1,6931, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6932 36.549 155.0 400730.0 25 0 25887.0 + 18576 LAASVVLVGV 10 101 464.29729129956985 926.5800296659396 2 464.2975646853447 MULTI CID FTMS 0 0 0 6923 188338.53125 1.0 0 0.0 9 Unmodified _LAASVVLVGV_ REV__ENST00000321930.4_17:78977795-78978311:+|nuORF 13.614867670302877 0.6190977555336379 5 [{I|L}V][DG]V 5 -1 21.232 0.0 0.0 2.2914 0.0 0.0 0.0 440.2884701779116 440.2884701779116 -2.966226235880516 0.0 -2.966226235880516 0.0 0 0.5 1.6989700043360187 0.0 0.0 [{I|L}V][DG]V 2.2914 - 162 1 2.089 51012.6 1.0 2727 4203 6923 SUDHL4_400M_050219_1,6932 SUDHL4_400M_050219_1,6932,LAASVVLVGV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6934 36.554 39.0 1195100.0 25 0 178490.0 + -1 VMPIQPTI 8 77 457.7564351594002 0 457.7564269900322 PEAK CID FTMS 0 0 0 6933 1014699.9375 0.2869919112228495 2 -0.1433944702148437 1 Oxidation (M) _VM(Oxidation (M))PIQPTI_ REV__ENSG00000121406|ENST00000376233|ZNF549 14.581692164780916 0.4900557725783909 5 NGVNR 5 -1 26.102 0.0 0.0 2.8574 0.0 0.0 232.14435435688728 138.05622278385002 370.2005771407373 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 NGVNR 2.8574 - 249 + 1 2.089 43510.7 1.0 2728 4204 6933 SUDHL4_400M_050219_1,6934 SUDHL4_400M_050219_1,6934,VMPIQPTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6935 36.555 52.0 910350.0 25 0 160250.0 + 16259 IVSAQNLLK 9 75 493.3058709667648 984.5971890003296 2 493.3060180544853 MULTI CID FTMS 0 0 0 6933 687368.5 0.2466836680678587 2 -0.1433944702148437 2 Unmodified _IVSAQNLLK_ L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;nc|ENSG999|O00370|L1_ORF2 27.628801355627647 0.1796483985696185 5 {I|L}VSAQN{I|L}{I|L}K 9 0 + 53.856 0.0 0.0 5.4699 5.4699 92.494 0.0 0.0 0.0 39.82066300810249 4.783340249198403 4.783340249198403 53.856468616805714 0 0.8182503180159344 2.0 0.0 0.1271595765414318 + + {I|L}VSAQN{I|L}{I|L}K 5.4699 + + 104 + 1 2.089 42084.2 1.0 2729 4204 6933 SUDHL4_400M_050219_1,6935 SUDHL4_400M_050219_1,6935,IVSAQNLLK False True False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 6936 36.557 127.0 438890.0 25 0 48739.0 -1 AMNPTNTVF 9 89 505.73443426326816 1009.4543155933364 2 505.7345458865166 MULTI CID FTMS 0 0 0 6933 290848.96875 0.3049305270836158 -2 0.1309127807617187 3 Oxidation (M) _AM(Oxidation (M))NPTNTVF_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000443628.2_1_X:114011085-114011187:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 26.88365393820708 0.1891292719743517 5 T{[QC]|[C(Carbamidomethyl (C))A]}T{M(Oxidation (M))|F}{M(Oxidation (M))|F} 6 -1 29.161 0.0 0.0 2.8887 0.0 0.0 264.14778374200927 0.0 264.14778374200927 0.0 8.218421963928435 0.0 0.0 0 0.4247425010840047 0.0 0.7059771852360797 0.3494850021680094 T{[QC]|[C(Carbamidomethyl (C))A]}T{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.8887 - 173 + 1 2.089 46437.2 1.0 2730 4204 6933 SUDHL4_400M_050219_1,6936 SUDHL4_400M_050219_1,6936,AMNPTNTVF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6937 36.562 225.0 299060.0 25 0 56457.0 + 44075 YITTPKGV 8 87 439.7526960825221 877.4908392318441 2 439.7528259158134 MULTI CID FTMS 0 0 0 6933 201606.15625 1.0 0 0.0 4 Unmodified _YITTPKGV_ REV__ENSG00000150672|ENST00000376104|DLG2;REV__ENST00000529111.5_1_11:83344252-84634162:-|nuORF;REV__nc|ENSG00000150672|Q15700-3|DLG2;REV__nc|ENSG00000150672|Q15700-4|DLG2;REV__nc|ENSG00000150672|Q15700|DLG2 24.67388899826682 0.525179942228231 5 Y{I|L}V{[CT]|[{M(Oxidation (M))|F}G]}{I|L}GG 8 -1 54.039 0.0 0.0 6.1583 0.0 0.0 0.0 68.0514162652953 68.0514162652953 41.27451730244511 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.3807196863200844 0.0 Y{I|L}V{[CT]|[{M(Oxidation (M))|F}G]}{I|L}GG 6.1583 - 147 + 1 2.089 59241.7 1.0 2731 4204 6933 SUDHL4_400M_050219_1,6937 SUDHL4_400M_050219_1,6937,YITTPKGV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6938 36.569 426.0 219100.0 25 0 35118.0 + 10327 FSEEDYRTL 9 98 580.2671019502512 1158.5196509673024 2 580.2673828005791 MULTI CID FTMS 0 0 0 6933 162958.1875 0.5746964215968493 -1 0.0752639770507812 5 Unmodified _FSEEDYRTL_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 70.33199760932243 0.0209706178985989 5 {M(Oxidation (M))|F}SEEDYRT{I|L} 9 0 + 73.211 0.0 0.0 6.3193 6.3193 94.465 0.0 0.0 0.0 58.12192639995172 7.70281599369082 7.70281599369082 44.141985822527765 0 0.7059771852360797 0.0 1.274227503252014 0.0 + + {M(Oxidation (M))|F}SEEDYRT{I|L};{M(Oxidation (M))|F}S{M(Oxidation (M))|F}[KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{M(Oxidation (M))|F};{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{[QS]|[NT]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}H{M(Oxidation (M))|F};{M(Oxidation (M))|F}S{M(Oxidation (M))|F}[KS]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}S{M(Oxidation (M))|F}{[QS]|[NT]}{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L} 6.3193;2.5091;2.5091;2.1751;2.1751 +;-;-;-;- + 112 + 1 2.089 76025.2 1.0 2732 4204 6933 SUDHL4_400M_050219_1,6938 SUDHL4_400M_050219_1,6938,FSEEDYRTL True True FSEEDYRTL 36.569319 580.267382800579 1733106.5 6933.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 7.476919174194336 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6939 36.574 227.0 362640.0 25 0 35461.0 -1 0 124 398.22993408556624 794.4453152379325 2 398.7302123904228 MULTI CID FTMS 0 0 0 6933 151012.84375 0.4630395636146631 -7 0.4054641723632812 6 5 P 1 -1 9.3971 0.0 0.0 1.1829 0.0 0.0 679.3816383353919 0.0 679.3816383353919 0.0 1.1483704356415636 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.1829 - 42 + 1 2.089 68028.8 1.0 2733 4204 6933 SUDHL4_400M_050219_1,6939 SUDHL4_400M_050219_1,6939, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6940 36.581 394.0 421960.0 25 0 39714.0 -1 0 217 360.20684509146366 359.1995686248637 1 360.2063476443291 MULTI CID FTMS 0 0 0 6933 160842.890625 0.4599810340593333 -2 0.1309127807617187 7 5 {[{M(Oxidation (M))|F}H]|[RQ]}G 3 -1 {[{M(Oxidation (M))|F}H]|[RQ]} + + 9.464 -0.92346 -0.32497 2.6347 2.6347 53.617 0.0 0.0 0.0 0.0 1.0121009888901522 0.0 0.0 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}G 2.6347 - 26 + 1 2.089 129020.4 1.0 2734 4204 6933 SUDHL4_400M_050219_1,6940 SUDHL4_400M_050219_1,6940, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6941 36.594 800.0 139420.0 25 0 9128.7 + 17935 KQYADVEGF 9 173 528.7533521311829 1055.4921513291656 2 528.7535278201103 MULTI CID FTMS 0 0 0 6933 120013.0234375 0.1979817308468564 3 -0.2051582336425781 8 Unmodified _KQYADVEGF_ ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK 27.628801355627647 0.1796483985696185 5 [EP]E{I|L}HVEG{M(Oxidation (M))|F} 9 5 + 34.695 0.0 0.0 3.2871 3.2871 73.645 0.0 0.0 0.0 0.7141167541307212 8.726182469308114 0.7141167541307212 0.7141167541307212 0 1.211758134947864 0.5376020021010439 0.6109243748081782 0.0 [EP]E{I|L}HVEG{M(Oxidation (M))|F};[KA]GYADVEG{M(Oxidation (M))|F};[KQ]YADVEG{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}SKADVEG{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}KSADVEG{M(Oxidation (M))|F};[YQ]KADVEG{M(Oxidation (M))|F};[KA][YQ]DVEG{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}H{I|L}HVEG{M(Oxidation (M))|F};[KG]AYADVEG{M(Oxidation (M))|F};[KG]{M(Oxidation (M))|F}SADVEG{M(Oxidation (M))|F} 3.2871;3.2195;3.1076;2.903;2.8597;2.8428;2.4858;2.3711;2.2298;1.9216 -;-;+;-;-;-;-;-;-;- + 696 1 2.089 87365.6 0.6000000238418579 2735 4204 6933 SUDHL4_400M_050219_1,6941 SUDHL4_400M_050219_1,6941,KQYADVEGF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6942 36.598 199.0 296800.0 25 0 23388.0 39789 VEQQPEKV 8 102 478.7563111119025 0 478.7559692263603 PEAK CID FTMS 0 0 0 6933 105702.0859375 0.573785513558774 -2 0.1309127807617187 9 Unmodified _VEQQPEKV_ nc|ENSG00000138386|Q13506-2|NAB1 18.13498045792455 0.4501116112875982 5 T 1 8 8.8515 0.0 0.0 0.92638 0.0 0.0 629.3375774657678 222.08811365299064 851.4256911187584 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 T 0.92638 - 40 + 1 2.089 48114.2 1.0 2736 4204 6933 SUDHL4_400M_050219_1,6942 SUDHL4_400M_050219_1,6942,VEQQPEKV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 6943 36.612 800.0 221380.0 25 0 21358.0 -1 0 127 909.0604822703108 2724.1596174111323 3 909.3914062380792 MULTI CID FTMS 0 0 0 6933 80633.5859375 0.1395630729251912 -2 0.1309127807617187 10 5 [DN]{[CP]|[EA]}YTQQAT 10 -1 64.035 0.0 0.0 2.3507 0.0 0.0 0.0 1599.6647193000574 1599.6647193000574 7.083249385565338 0.0 0.0 0.0 0 0.0 1.6989700043360187 2.115356566548286 1.583839506110969 [DN]{[CP]|[EA]}YTQQAT 2.3507 - 69376 1 2.089 119484.3 0.5199999809265137 2737 4204 6933 SUDHL4_400M_050219_1,6943 SUDHL4_400M_050219_1,6943, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6944 36.614 72.0 2292400.0 25 0 641530.0 + 34367 SLTGRLDEV 9 112 495.26685550372326 988.5191580742464 2 495.2670776247978 MULTI CID FTMS 0 0 0 6933 618763.5 0.1285282974188965 -2 0.1309127807617187 11 Unmodified _SLTGRLDEV_ ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6 70.33199760932243 0.0209706178985989 5 {[TV]|[{I|L}S]}TGREVEV 9 2 + 70.842 0.0 0.0 7.1665 7.1665 94.192 0.0 0.0 0.0 11.17931555708239 14.973024840566469 11.17931555708239 11.17931555708239 0 1.9802046884880933 2.0 1.25 0.0 {[TV]|[{I|L}S]}TGREVEV;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}TTVEV;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}TEVTV;{[TV]|[{I|L}S]}[WK]EVEV;{[TV]|[{I|L}S]}T{[WT]|[RM]}VSPV;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}ETVTV;{NN|[MP]|[D{I|L}]|[EV]}[WK]TVEV;{NN|[MP]|[D{I|L}]|[EV]}[WK]EVTV;{[TV]|[{I|L}S]}{[QG]|[NA]}{[QG]|[NA]}TVTV;[WK]{I|L}DTVEV 7.1665;6.0355;5.8886;5.7279;5.6155;5.5841;5.3802;5.2333;5.1829;5.0627 -;-;-;-;-;-;-;-;-;- 1938 1 2.089 130210.6 1.0 2738 4204 6933 SUDHL4_400M_050219_1,6944 SUDHL4_400M_050219_1,6944,SLTGRLDEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6946 36.619 31.0 1461300.0 25 0 124000.0 + 31129 RLMNDMTAV 9 71 525.7568132116102 1049.4990734900202 2 525.7574951052666 MULTI CID FTMS 0 0 0 6945 1410057.875 0.3588406728190046 2 -0.1400833129882812 1 Unmodified _RLMNDMTAV_ ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1 38.17557092003332 0.0854718145212029 5 [TA][WR]DMTAV 9 4 + 54.833 0.0 0.0 5.2247 5.2247 84.82 0.0 0.0 0.0 0.4036245867396815 37.84372166990863 0.4036245867396815 6.438937347570075 0 0.8807196863200843 1.0457574905606752 0.5 0.4247425010840047 [TA][WR]DMTAV;Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D[QP]TAV;YWW[QP]TAV;[TA][WR]DMG[{I|L}T];Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D[WR][PG] 5.2247;4.6112;3.5892;2.8475;0.96342 -;-;-;-;- 114 1 2.107 41610.9 1.0 2739 4205 6945 SUDHL4_400M_050219_1,6946 SUDHL4_400M_050219_1,6946,RLMNDMTAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6947 36.633 800.0 289220.0 25 0 17433.0 + 20156 LKPGILPVPK 10 191 531.357428828523 1060.700304723846 2 531.3575317263603 MULTI CID FTMS 0 0 0 6945 122834.6328125 0.0162809146197443 27 -1.181438446044922 2 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 17.86316937532769 0.5478153791579383 5 K{I|L}AP{I|L}VKD{I|L} 9 -1 68.013 0.0 0.0 6.4121 0.0 0.0 0.0 80.05121027164296 80.05121027164296 41.10161358642024 0.0 0.0 0.0 0 1.8494850021680087 0.3010299956639812 1.309894379144197 0.0 K{I|L}AP{I|L}VKD{I|L} 6.4121 - 1440 + 1 2.107 177036.5 0.6800000071525574 2740 4205 6945 SUDHL4_400M_050219_1,6947 SUDHL4_400M_050219_1,6947,LKPGILPVPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6948 36.635 113.0 491590.0 25 0 37550.0 1670 ALPADAHLY 9 98 485.7535601640635 969.492567394927 2 485.7539245486259 MULTI CID FTMS 0 0 0 6945 219850.671875 0.2836102427038674 -8 0.4705390930175781 3 Unmodified _ALPADAHLY_ ENSG00000166448|ENST00000339375|TMEM130;nc|ENSG00000166448|Q8N3G9|TMEM130 18.13498045792455 0.3457906370836843 5 [{I|L}A]{[WN]|[YH]}E{I|L}[QP] 8 7 + 38.434 0.0 0.0 3.9643 3.9643 75.717 0.0 0.0 0.0 18.46832715811012 5.1849178312658495 5.1849178312658495 1.249387366082999 0 0.3807196863200844 2.0 0.2742275032520141 0.0 [{I|L}A]{[WN]|[YH]}E{I|L}[QP];[{I|L}A][WD]Q{I|L}[QP];[{I|L}A][WD][AG]{I|L}[QP];[{I|L}A]{M(Oxidation (M))|F}[NG]{[SA]|[TG]}KY 3.9643;3.8354;2.8801;2.3867 -;-;-;- 215 + 1 2.107 50114.7 1.0 2741 4205 6945 SUDHL4_400M_050219_1,6948 SUDHL4_400M_050219_1,6948,ALPADAHLY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6949 36.638 184.0 261490.0 25 0 19839.0 + 42726 VVDAVVTQV 9 101 465.2688766499553 928.5232003667106 2 465.2693664431572 MULTI CID FTMS 0 0 0 6945 142103.5625 1.0 0 0.0 4 Unmodified _VVDAVVTQV_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 32.30548876998284 0.1201446275138228 5 VVDAV[QT]VV 9 2 + 26.321 0.0 0.0 2.8347 2.8347 82.766 0.0 0.0 0.0 8.652588594290638 -4.771212547196623 -4.771212547196623 9.719712763997563 0 0.0 1.6989700043360187 0.0 0.0 VVDAV[QT]VV;{NN|[MP]|[D{I|L}]|[EV]}GVV[QT]VV 2.8347;1.7879 -;- 146 1 2.107 41517.4 1.0 2742 4205 6945 SUDHL4_400M_050219_1,6949 SUDHL4_400M_050219_1,6949,VVDAVVTQV True True VVDAVVTQV 36.638443 465.269366443157 692613.4375 6945.0 ENST00000526368.1_1_11:62530297-62533976:+|nuORF;;ENSG00000168002|ENST00000301788|POLR2G;;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 5.422380765279134 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6950 36.652 800.0 124880.0 25 0 6198.7 -1 KGFDFKTCNVL 11 133 664.8380959730682 1327.6616390129363 2 665.3407470583916 MULTI CID FTMS 0 0 0 6945 135716.734375 0.8724187632080096 -1 0.0650749206542968 5 Carbamidomethyl (C) _KGFDFKTC(Carbamidomethyl (C))NVL_ ENSG00000151224|ENST00000372213|MAT1A 11.494710602746466 0.7960433852372589 5 [PA]TM{I|L}PSESANV 12 -1 67.081 0.0 0.0 5.0526 0.0 0.0 0.0 127.06682717963704 127.06682717963704 47.57322283717394 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.6549471895720984 0.0 [PA]TM{I|L}PSESANV 5.0526 - 8502 1 2.107 77538.6 0.6800000071525574 2743 4205 6945 SUDHL4_400M_050219_1,6950 SUDHL4_400M_050219_1,6950,KGFDFKTCNVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6951 36.666 800.0 147630.0 25 0 7602.4 + 17943 KQYEVEIQTY 10 138 650.8252179946071 1299.635883056014 2 650.8264648318291 MULTI CID FTMS 0 0 0 6945 117282.34375 0.5644709532920059 -2 0.1403388977050781 6 Unmodified _KQYEVEIQTY_ ENSG00000117724|ENST00000366955|CENPF 93.16586880292088 0.0091067182461363 5 [YT]QRVE{I|L}QTY 10 4 + 86.248 0.0 0.0 6.6363 6.6363 91.007 0.0 0.0 0.0 9.938783620494943 11.20506544868192 9.938783620494943 9.164539485499262 0 1.1435078169319297 0.958607314841775 2.004432191740108 0.8807196863200843 [YT]QRVE{I|L}QTY;[YT]QRVE{I|L}[AG]TY;[YT]Q[VG]VE{I|L}QTY;[AG]TYRVE{I|L}QTY;[YE]QKVE{I|L}QTY;[QT]YRVE{I|L}QTY;[AG]YTRVE{I|L}QTY;[YT][AG]RVE{I|L}QTY;[YT]Q{I|L}AAE{I|L}QTY;[YE]VQKE{I|L}QTY 6.6363;5.9311;5.9311;5.8716;5.8367;5.7954;5.6759;5.5464;5.5027;5.455 -;-;-;-;-;-;-;-;-;- 3703 1 2.107 97333.5 0.6399999856948853 2744 4205 6945 SUDHL4_400M_050219_1,6951 SUDHL4_400M_050219_1,6951,KQYEVEIQTY True True KQYEVEIQTY 36.666112 650.826464831829 1224712.625 6945.0 ENSG00000117724|ENST00000366955|CENPF 6.8709031740824384 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6952 36.671 283.0 319350.0 25 0 27320.0 + 2960 AVIDQGLITR 10 129 543.3197359180734 1084.6249189029468 2 543.3201171755791 MULTI CID FTMS 0 0 0 6945 106706.4765625 1.0 0 0.0 7 Unmodified _AVIDQGLITR_ ENSG00000278615|ENST00000524958|C11orf98;ENST00000354588.7_1_11:62430524-62435168:-|nuORF;ENST00000532786.2_1_11:62430524-62432598:-|nuORF 21.59015148037692 0.4836074274810599 5 {[VA]|[{I|L}G]}{I|L}DQ 5 5 48.372 0.0 0.0 4.4598 0.0 0.0 0.0 555.3257431268811 555.3257431268811 6.711958522934509 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3054621874040891 0.3807196863200844 + {[VA]|[{I|L}G]}{I|L}DQ 4.4598 + + 717 + 1 2.107 75867.7 1.0 2745 4205 6945 SUDHL4_400M_050219_1,6952 SUDHL4_400M_050219_1,6952,AVIDQGLITR False True AVIDQGLITR 36.671332 543.320117175579 548347.75 6945.0 ENST00000354588.7_1_11:62430524-62435168:-|nuORF;;ENST00000532786.2_1_11:62430524-62432598:-|nuORF;;ENSG00000278615|ENST00000524958|C11orf98 5.193331718444824 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6953 36.674 158.0 443300.0 25 0 50676.0 + 42620 VTTDIQVKV 9 106 501.7955971592349 1001.5766413852698 2 501.7954284548759 MULTI CID FTMS 0 0 0 6945 295252.78125 0.8862452801411075 -1 0.0650749206542968 8 Unmodified _VTTDIQVKV_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 49.55428908609986 0.0413471690215031 5 VTTD{I|L}QVKV 9 0 + 73.402 0.0 0.0 7.3287 7.3287 93.083 0.0 0.0 0.0 49.41284673461753 9.367751845246003 9.367751845246003 9.208187539523747 0 0.75 2.0 0.0 0.4749073637206092 + + VTTD{I|L}QVKV;VTTD{I|L}[AG]VKV;V[WM]{I|L}QVKV;V[WM]{I|L}[AG]VKV 7.3287;6.4093;2.6894;1.7647 +;-;-;- + 529 + 1 2.107 58510.7 1.0 2746 4205 6945 SUDHL4_400M_050219_1,6953 SUDHL4_400M_050219_1,6953,VTTDIQVKV True True VTTDIQVKV 36.674438 501.795428454876 1578817.625 6945.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 4.487610658009847 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6954 36.678 131.0 372190.0 25 0 34181.0 + + 10381 FSAGEPRVL 9 86 488.2683587695914 974.5221646059828 2 488.2671081423759 MULTI CID FTMS 0 0 0 6945 204217.515625 0.7174817150848066 4 -0.2303695678710937 9 Unmodified _FSRPVQLE_ nc|ENSG00000183011|Q9BRA0-2|NAA38;ENSG00000183011|ENST00000575771|NAA38 18.1463463914782 0.6428359029697936 5 {M(Oxidation (M))|F}SAW 4 -1 33.36 0.0 0.0 3.4232 0.0 0.0 0.0 480.2942079514088 480.2942079514088 20.595581006474752 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F}SAW 3.4232 - 89 + 1 2.107 42445.0 1.0 2747 4205 6945 SUDHL4_400M_050219_1,6954 SUDHL4_400M_050219_1,6954,FSRPVQLE False False FSAGEPRVL 36.678282 488.267108142376 2188973.0 6945.0 nc|ENSG00000183011|Q9BRA0-2|NAA38;;ENSG00000183011|ENST00000575771|NAA38 3.940531253814697 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6955 36.692 800.0 130810.0 25 0 37352.0 + -1 FAYGSGNSL 9 102 916.4249010396296 1830.8352491460591 2 916.4249755740166 MULTI CID FTMS 0 0 0 6945 185021.609375 0.8027067989459739 1 -0.0783195495605468 10 ENSG00000126705|ENST00000673934|AHDC1 5 {[QS]|[NT]}[YR]YS{I|L}YY{I|L}QS{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 14 -1 + 55.076 0.0 0.0 3.0083 3.0083 54.189 0.0 0.0 0.0 7.861108642308885 6.06446953481715 6.06446953481715 0.0 0 0.7614393726401688 0.0 1.3979400086720375 0.6861818737241735 {[QS]|[NT]}[YR]YS{I|L}YY{I|L}QS{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[QS]|[NT]}[YR]YS{I|L}YY{I|L}KS{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[MS]|[{M(Oxidation (M))|F}A]}[C(Carbamidomethyl (C))R]YS{I|L}YY{I|L}KS{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[MS]|[{M(Oxidation (M))|F}A]}[C(Carbamidomethyl (C))R]YS{I|L}YY{I|L}QS{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[NP]A{[HG]|PP}GWRQQN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP][HQ]GWRQQN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[CP]|[EA]}[Y{I|L}]GWRQQN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[WC(Carbamidomethyl (C))]{I|L}YY{I|L}QS{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[NP]{I|L}N[WC(Carbamidomethyl (C))]{I|L}YY{I|L}KS{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NQQRW{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.0083;3.0083;2.5789;2.5789;1.7417;1.7041;1.5425;1.5083;1.5083;1.4908 -;-;-;-;-;-;-;-;-;- 1400 1 2.107 78129.8 0.6299999952316284 2748 4205 6945 SUDHL4_400M_050219_1,6955 SUDHL4_400M_050219_1,6955, False False FAYGSGNSL 36.69213 916.424975574017 1827494.875 6945.0 ENSG00000126705|ENST00000673934|AHDC1 0.7977636655171713 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6957 36.698 196.0 394510.0 25 0 73342.0 + 42670 VTVRPGLAM 9 114 472.2733061746492 0 472.2742797732353 PEAK CID FTMS 0 0 0 6956 259678.796875 0.3563559653114651 -3 0.218658447265625 1 Unmodified _VTVRPGLAM_ ENSG00000099974|ENST00000215770|DDTL;ENSG00000099977|ENST00000398344|DDT;ENST00000444947.2_1_22:24315904-24316657:-|nuORF;nc|ENSG00000099977|P30046-2|DDT 29.081581746732265 0.1187435359889091 5 A 1 8 15.242 0.0 0.0 1.6172 0.0 0.0 149.04830805066712 719.4244478815061 868.4727559321732 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 + A 1.6172 + + 37 + 1 2.107 65591.6 1.0 2749 4206 6956 SUDHL4_400M_050219_1,6957 SUDHL4_400M_050219_1,6957,VTVRPGLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6958 36.703 266.0 192520.0 25 0 39513.0 + 17262 KLPDLPQNSV 10 82 555.8111288212076 1109.607704709215 2 555.8116332888603 MULTI CID FTMS 0 0 0 6956 107875.078125 0.8776781463511995 1 -0.0617637634277343 2 Unmodified _KLPDLPQNSV_ ENSG00000100578|ENST00000652326|KIAA0586;ENST00000538571.6_1_14:58909433-59003756:+|nuORF;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-3|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586 12.240655878213236 0.6421556946785427 5 V 1 9 10.969 0.0 0.0 0.98856 0.0 0.0 992.5284409536472 0.0 992.5284409536472 0.0 -10.0 -10.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.98856 + + 84 + 1 2.107 45132.2 1.0 2750 4206 6956 SUDHL4_400M_050219_1,6958 SUDHL4_400M_050219_1,6958,KLPDLPQNSV False True KLPDLPQNSV 36.703357 555.81163328886 927443.8125 6956.0 ENSG00000100578|ENST00000652326|KIAA0586;;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;;nc|ENSG00000100578|Q9BVV6-3|KIAA0586;;nc|ENSG00000100578|Q9BVV6|KIAA0586;;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;;ENST00000538571.6_1_14:58909433-59003756:+|nuORF 1.899390558401744 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6959 36.706 99.0 616590.0 25 0 94281.0 + -1 NVIERLQEA 9 95 536.295965240538 1070.5773775478758 2 536.2935058474541 MULTI CID FTMS 0 0 0 6956 551264.375 0.588456597320444 -2 0.1433944702148437 3 Carbamidomethyl (C) _VNLEKPVIC(Carbamidomethyl (C))_ ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT 30.63653989081413 0.1413794767160703 5 {[NV]|[RG]}{I|L}E 4 -1 28.5 0.0 0.0 2.6621 0.0 0.0 0.0 612.3103121393186 612.3103121393186 13.438265792396251 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 {[NV]|[RG]}{I|L}E 2.6621 + + 97 + 1 2.107 52258.6 1.0 2751 4206 6956 SUDHL4_400M_050219_1,6959 SUDHL4_400M_050219_1,6959,VNLEKPVIC False False NVIERLQEA 36.705507 536.293505847454 4620716.0 6956.0 ENSG00000126756|ENST00000333119|UXT;;nc|ENSG00000126756|Q9UBK9-2|UXT 3.388882040977478 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6960 36.711 284.0 491510.0 25 0 32709.0 + 44139 YLDPAQQNL 9 155 531.2662032071577 1060.5178534811153 2 531.2667114138603 MULTI CID FTMS 0 0 0 6956 278134.84375 0.2225715749847606 -5 0.3529052734375 4 Unmodified _YLDPAQQNL_ ENST00000421406.1_1_1:247353282-247372753:-|nuORF 49.93300154707207 0.0405168250806675 5 [Y{I|L}]DPAQQN{I|L} 9 0 + 45.446 0.0 0.0 4.2853 4.2853 78.441 0.0 0.0 0.0 2.731363019014019 3.9203653217685286 2.731363019014019 2.731363019014019 0 0.8667053245199625 2.0 0.0 0.0 + + [Y{I|L}]DPAQQN{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPAQQN{I|L};[Y{I|L}]DPA[AG]QN{I|L};[Y{I|L}]DPAQ[AG]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPA[AG]QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPAQ[AG]N{I|L};{[TV]|[{I|L}S]}[HS]D{I|L}YN{I|L};[NS]E{[TV]|[{I|L}S]}ERN{I|L};[Y{I|L}]DMHRN{I|L};[Y{I|L}]DPA[AG][AG]N{I|L} 4.2853;4.0277;3.417;3.417;3.1594;3.1594;2.6993;2.6706;2.5637;2.5528 +;-;-;-;-;-;-;-;-;- + 1762 1 2.107 109504.3 1.0 2752 4206 6956 SUDHL4_400M_050219_1,6960 SUDHL4_400M_050219_1,6960,YLDPAQQNL True True YLDPAQQNL 36.710736 531.26671141386 24815170.5 6956.0 ENST00000421406.1_1_1:247353282-247372753:-|nuORF 5.701302528381348 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6961 36.714 171.0 393770.0 25 0 31591.0 + 20905 LMVDHVTEV 9 103 521.7655811830085 1041.516609432817 2 521.7658569216728 MULTI CID FTMS 0 0 0 6956 196487.34375 0.4206332986016454 -2 0.1433944702148437 5 Unmodified _LMVDHVTEV_ ENSG00000213523|ENST00000336283|SRA1;ENST00000602875.5_1_5:139930287-139937028:-|nuORF 34.10243960390752 0.1078313939113124 5 {I|L}M[{M(Oxidation (M))|F}V]TVD 7 5 44.261 0.0 0.0 4.2496 0.0 0.0 0.0 233.10418115787343 233.10418115787343 4.6193809240893415 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 1.110924374808178 0.0 {I|L}M[{M(Oxidation (M))|F}V]TVD 4.2496 - 640 + 1 2.107 58818.3 1.0 2753 4206 6956 SUDHL4_400M_050219_1,6961 SUDHL4_400M_050219_1,6961,LMVDHVTEV True True LMVDHVTEV 36.714088 521.765856921673 2116212.0 6956.0 ENSG00000213523|ENST00000336283|SRA1;;ENST00000602875.5_1_5:139930287-139937028:-|nuORF 4.165045261383057 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6962 36.719 279.0 270410.0 25 0 34021.0 + 35035 SQRAGLQF 8 89 453.74300223160736 905.4714515300147 2 453.7431213259697 MULTI CID FTMS 0 0 0 6956 138932.6875 0.569020435657443 -2 0.1433944702148437 6 Unmodified _SQRAGLQF_ ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-2|H2AZ2;nc|ENSG00000105968|Q71UI9-5|H2AZ2 38.17557092003332 0.2648138137323925 5 [AG]SRQ{I|L}Q{M(Oxidation (M))|F} 8 5 + 43.765 0.0 0.0 4.8334 4.8334 81.186 0.0 0.0 0.0 3.8390349012061264 12.439423219792369 3.8390349012061264 3.521825181113627 0 0.805462187404089 1.5228787452803376 0.0 0.2302046884880938 [AG]SRQ{I|L}Q{M(Oxidation (M))|F};[AG]SRAG{I|L}Q{M(Oxidation (M))|F};{[QS]|[NT]}RQ{I|L}Q{M(Oxidation (M))|F};{[QS]|[NT]}RAG{I|L}Q{M(Oxidation (M))|F};[AG]SRQ{I|L}[AG]{M(Oxidation (M))|F};[AG]SRAG{I|L}[AG]{M(Oxidation (M))|F};{[QS]|[NT]}RQ{I|L}[AG]{M(Oxidation (M))|F};[AG][WK]G{I|L}Q{M(Oxidation (M))|F};{[QS]|[NT]}RAG{I|L}[AG]{M(Oxidation (M))|F};[AG][WK]G{I|L}[AG]{M(Oxidation (M))|F} 4.8334;4.4445;4.4094;4.0129;3.8105;3.4275;3.379;3.0951;2.99;2.0722 -;-;-;+;-;-;-;-;-;- + 95 1 2.107 63836.1 1.0 2754 4206 6956 SUDHL4_400M_050219_1,6962 SUDHL4_400M_050219_1,6962,SQRAGLQF False True SQRAGLQF 36.71922 453.74312132597 1176660.25 6956.0 nc|ENSG00000105968|Q71UI9-5|H2AZ2;;ENSG00000105968|ENST00000308153|H2AZ2;;ENSG00000164032|ENST00000296417|H2AZ1;;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;;nc|ENSG00000105968|Q71UI9-2|H2AZ2 4.78209376335144 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6963 36.723 221.0 298210.0 25 0 21686.0 + 18393 KVTEGSFVY 9 107 515.2669879267542 1028.5194229203082 2 515.2665283083916 MULTI CID FTMS 0 0 0 6956 132881.328125 0.6682055457633393 -2 0.1433944702148437 7 Unmodified _KVTEGSFVY_ ENSG00000057608|ENST00000380191|GDI2 39.94969957227396 0.0757326808254658 5 S{M(Oxidation (M))|F}VY 4 5 49.17 0.0 0.0 4.7807 0.0 0.0 514.2780628888687 0.0 514.2780628888687 0.0 23.613787703462982 0.0 0.0 0 1.0994850021680094 0.0 0.9247425010840048 0.0 + S{M(Oxidation (M))|F}VY 4.7807 + + 115 1 2.107 56119.0 1.0 2755 4206 6956 SUDHL4_400M_050219_1,6963 SUDHL4_400M_050219_1,6963,KVTEGSFVY True True KVTEGSFVY 36.723403 515.266528308392 1092606.25 6956.0 ENSG00000057608|ENST00000380191|GDI2 3.963884115219116 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6964 36.737 800.0 96157.0 25 0 4430.1 -1 0 119 835.9220319195396 1669.829510905879 2 835.9218017458916 MULTI CID FTMS 0 0 0 6956 113083.7109375 1.0 0 0.0 8 5 [PS]QSANV{I|L}WAQ 11 -1 96.84 0.0 0.0 5.7994 0.0 0.0 0.0 485.229849622696 485.229849622696 71.98307358201963 0.0 0.0 0.0 0 3.7302046884880937 1.0969100130080565 1.2302046884880935 0.6861818737241735 [PS]QSANV{I|L}WAQ 5.7994 - 10940 1 2.107 53805.3 0.6299999952316284 2756 4206 6956 SUDHL4_400M_050219_1,6964 SUDHL4_400M_050219_1,6964, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6965 36.751 800.0 168840.0 25 0 7304.1 + 31045 RLIDLHTNV 9 146 540.8120651315025 1079.609577329805 2 540.8114501833916 MULTI CID FTMS 0 0 0 6956 99836.59375 1.0 0 0.0 9 Unmodified _RLIDLHTNV_ ENSG00000092108|ENST00000458591|SCFD1;ENST00000555259.5_1_14:31112578-31185169:+|nuORF;ENST00000555953.1_1_14:31142550-31144373:+|nuORF;nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1 45.739877483867886 0.0497104363764649 5 {I|L}{I|L}[RD]{I|L}HTD 8 4 53.747 0.0 0.0 4.9784 0.0 0.0 0.0 113.07108276665907 113.07108276665907 39.28334379460914 0.0 0.0 0.0 0 1.336696871556164 1.6989700043360187 0.8494850021680094 0.25 {I|L}{I|L}[RD]{I|L}HTD 4.9784 - 761 1 2.107 105436.1 0.5600000023841858 2757 4206 6956 SUDHL4_400M_050219_1,6965 SUDHL4_400M_050219_1,6965,RLIDLHTNV True True RLIDLHTNV 36.751084 540.811450183392 516926.9375 6956.0 ENST00000555259.5_1_14:31112578-31185169:+|nuORF;;nc|ENSG00000092108|Q8WVM8-2|SCFD1;;nc|ENSG00000092108|Q8WVM8-3|SCFD1;;ENST00000555953.1_1_14:31142550-31144373:+|nuORF;;ENSG00000092108|ENST00000458591|SCFD1 6.827639261881511 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6966 36.754 139.0 483740.0 25 0 147040.0 -1 0 66 457.26496053902815 456.25768407242816 1 457.2650329470634 MULTI CID FTMS 0 0 0 6956 195063.4375 0.5881484418475499 -2 0.1433944702148437 10 5 T{I|L} 2 -1 12.703 0.0 0.0 2.7842 0.0 0.0 224.1152870771141 0.0 224.1152870771141 0.0 7.016675202793719 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 T{I|L} 2.7842 - 10 + 1 2.107 56831.2 1.0 2758 4206 6956 SUDHL4_400M_050219_1,6966 SUDHL4_400M_050219_1,6966, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6968 36.759 45.0 1155900.0 25 0 50986.0 + 31134 RLNDFASTV 9 79 511.7662424661521 1021.517931999104 2 511.7668945193291 MULTI CID FTMS 0 0 0 6967 940813.1875 0.5950653452665201 1 -0.0401420593261718 1 Unmodified _RLNDFASTV_ ENSG00000178741|ENST00000322347|COX5A 29.84058131909904 0.1515068451768857 5 {M(Oxidation (M))|F}ASTV 5 4 49.129 0.0 0.0 4.8095 0.0 0.0 498.2556263019715 0.0 498.2556263019715 0.0 35.150064313529 0.0 0.0 0 1.16944517631652 0.0 0.4247425010840047 0.0 + {M(Oxidation (M))|F}ASTV 4.8095 + + 87 1 2.123 42288.7 1.0 2759 4207 6967 SUDHL4_400M_050219_1,6968 SUDHL4_400M_050219_1,6968,RLNDFASTV False True RLNDFASTV 36.759007 511.766894519329 16341693.0 6967.0 ENSG00000178741|ENST00000322347|COX5A 4.795265118281047 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6969 36.762 162.0 511600.0 25 0 32568.0 + 22709 LQFPVGRVH 9 106 351.53808891897256 1051.5924373571177 3 351.5381652712822 MULTI CID FTMS 0 0 0 6967 192715.75 0.2165560084640409 2 -0.0902862548828125 2 Unmodified _LQFPVGRVH_ ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 10.823927491677226 0.5436922275383211 5 PVRRH 5 5 16.198 0.0 0.0 1.5403 0.0 0.0 388.2102471909391 0.0 388.2102471909391 0.0 11.281446971601312 0.0 0.0 0 0.0 0.0 0.0 0.0 PVRRH 1.5403 - 48 + 1 2.123 72711.0 1.0 2760 4207 6967 SUDHL4_400M_050219_1,6969 SUDHL4_400M_050219_1,6969,LQFPVGRVH False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6970 36.765 153.0 375320.0 25 0 47286.0 + 34491 SMMDVDHQI 9 94 538.2304504228908 1074.4463479125816 2 538.2310058474541 MULTI CID FTMS 0 0 0 6967 222240.59375 0.5137985159899825 -2 0.1400833129882812 3 Unmodified _SMMDVDHQI_ ENSG00000150753|ENST00000280326|CCT5;ENST00000508451.1_1_5:10250422-10254994:+|nuORF 31.26834338654808 0.1333407332142048 5 {[MS]|[{M(Oxidation (M))|F}A]}MDVDHQ{I|L} 9 0 + 58.538 0.0 0.0 5.4482 5.4482 90.787 0.0 0.0 0.0 29.822488055895008 7.497557671098193 7.497557671098193 15.515384402724592 0 0.4247425010840047 1.6989700043360187 0.4247425010840047 0.6307196863200843 + + {[MS]|[{M(Oxidation (M))|F}A]}MDVDHQ{I|L};{[MS]|[{M(Oxidation (M))|F}A]}MDVDH[AG]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}MR{[MS]|[{M(Oxidation (M))|F}A]}[W{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}[YV]GAD[W{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}[YV]QD[W{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}MDV[RH]{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}[YV]DQ[W{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}MDV[YR]{[CA]|SS};{[MS]|[{M(Oxidation (M))|F}A]}M{[MG]|[TS]}[VS][W{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}[YV]GA[{M(Oxidation (M))|F}T]{[CP]|[EA]} 5.4482;4.0042;3.716;3.6844;3.6418;3.4796;3.1978;3.0883;3.06;2.4321 +;-;-;-;-;-;-;-;-;- + 592 + 1 2.123 49286.2 1.0 2761 4207 6967 SUDHL4_400M_050219_1,6970 SUDHL4_400M_050219_1,6970,SMMDVDHQI False True SMMDVDHQI 36.765225 538.2317 2144551.5 6967.0 ENSG00000150753|ENST00000280326|CCT5;;ENST00000508451.1_1_5:10250422-10254994:+|nuORF 7.577651818593343 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6971 36.77 240.0 236670.0 25 0 22542.0 + 32425 SAAQPGVAF 9 96 424.219033696234 846.4235144592681 2 424.2187072634697 MULTI CID FTMS 0 0 0 6967 183580.8125 0.4294600688763597 3 -0.0981712341308593 4 Unmodified _SAAQPGVAF_ ENSG00000108061|ENST00000369452|SHOC2;nc|ENSG00000108061|Q9UQ13-2|SHOC2 25.399314129420983 0.2080152500878129 5 {M(Oxidation (M))|F}QA{M(Oxidation (M))|F} 4 6 21.982 0.0 0.0 2.5971 0.0 0.0 335.1854906328993 0.0 335.1854906328993 0.0 1.575994759290964 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}QA{M(Oxidation (M))|F} 2.5971 - 126 + 1 2.123 52274.4 1.0 2762 4207 6967 SUDHL4_400M_050219_1,6971 SUDHL4_400M_050219_1,6971,SAAQPGVAF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6972 36.779 512.0 226100.0 25 0 9010.7 + 24577 MLHDFTQQV 9 151 559.7665405757722 1117.5185282183445 2 559.7689697146416 MULTI CID FTMS 0 0 0 6967 172932.59375 0.4851213258512306 -3 0.2051582336425781 5 Unmodified _MLHDFTQQV_ ENSG00000105851|ENST00000496166|PIK3CG 48.345845343767074 0.0439967357579942 5 {NN|[MP]|[D{I|L}]|[EV]}HM{M(Oxidation (M))|F}TQ{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 51.344 0.0 0.0 4.5944 4.5944 78.247 0.0 0.0 0.0 1.7512221771712433 7.147642715192504 1.7512221771712433 1.7512221771712433 0 0.3054621874040891 0.8538719643217619 1.0418727718234408 0.0 {NN|[MP]|[D{I|L}]|[EV]}HM{M(Oxidation (M))|F}TQ{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HD{M(Oxidation (M))|F}TQ{[QV]|[N{I|L}]|[RA]|[KV]};[H{I|L}]MD{M(Oxidation (M))|F}TQ{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}HM{M(Oxidation (M))|F}T[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EQ{[QV]|[N{I|L}]|[RA]|[KV]};[HD]{M(Oxidation (M))|F}P{M(Oxidation (M))|F}TQ{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HD{M(Oxidation (M))|F}T[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MQ{[QV]|[N{I|L}]|[RA]|[KV]};[H{I|L}]MD{M(Oxidation (M))|F}T[AG]{[QV]|[N{I|L}]|[RA]|[KV]};[H{I|L}]DM{M(Oxidation (M))|F}TQ{[QV]|[N{I|L}]|[RA]|[KV]} 4.5944;4.4377;4.2233;3.7704;3.7098;3.6137;3.6137;3.4467;3.3994;3.3694 -;+;-;-;-;-;-;-;-;- + 2233 1 2.123 89246.3 1.0 2763 4207 6967 SUDHL4_400M_050219_1,6972 SUDHL4_400M_050219_1,6972,MLHDFTQQV True True MLHDFTQQV 36.77874 559.768969714642 1843729.25 6967.0 ENSG00000105851|ENST00000496166|PIK3CG 8.304444948832193 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6973 36.789 576.0 226310.0 25 0 25368.0 24292 MAYDRFLAI 9 125 550.2837482554388 1098.5529435776775 2 550.2835571169853 MULTI CID FTMS 0 0 0 6967 83012.4453125 0.3023096878232755 -4 0.2804222106933594 6 Unmodified _MAYDRFLAI_ ENSG00000180090|ENST00000323404|OR3A1;ENSG00000198674|ENST00000307002|OR10G6 15.847184025352805 0.4077185912009129 5 {[DS]|[MA]|[CV]|TT}YP{I|L}{[CA]|SS}SY 9 6 48.751 0.0 0.0 4.4378 0.0 0.0 0.0 96.08240686588124 96.08240686588124 34.1470593548587 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.4247425010840047 0.0 {[DS]|[MA]|[CV]|TT}YP{I|L}{[CA]|SS}SY 4.4378 - 118 + 1 2.123 102222.5 1.0 2764 4207 6967 SUDHL4_400M_050219_1,6973 SUDHL4_400M_050219_1,6973,MAYDRFLAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6974 36.791 113.0 473140.0 25 0 37734.0 + 39898 VFPASPSVSL 10 78 502.2748655258086 1002.5351781184172 2 502.2755004763603 MULTI CID FTMS 0 0 0 6967 251451.875 0.8420021847273972 -3 0.2051582336425781 7 Unmodified _VFPASPSVSL_ ENSG00000183655|ENST00000337975|KLHL25 43.85829265575387 0.1168243637355526 5 TVS{I|L} 4 7 42.423 0.0 0.0 4.2315 0.0 0.0 584.2914906232437 0.0 584.2914906232437 0.0 25.43305028184122 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 TVS{I|L} 4.2315 - 36 1 2.123 47457.2 1.0 2765 4207 6967 SUDHL4_400M_050219_1,6974 SUDHL4_400M_050219_1,6974,VFPASPSVSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6975 36.794 141.0 495100.0 25 0 52524.0 + 40284 VGVARRPD 8 107 435.2509640550933 868.4873751769866 2 435.2503539919853 MULTI CID FTMS 0 0 0 6967 210352.984375 0.7205901385932356 -4 0.2804222106933594 8 Unmodified _VGVARRPD_ REV__ENSG00000107864|ENST00000265997|CPEB3;REV__nc|ENSG00000107864|Q8NE35-2|CPEB3 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.123 56805.3 1.0 2766 4207 6967 SUDHL4_400M_050219_1,6975 SUDHL4_400M_050219_1,6975,VGVARRPD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6977 36.8 170.0 497050.0 25 0 74779.0 26777 PAGTGHMTW 9 101 479.21419182662254 956.4138307200452 2 479.2160522341728 MULTI CID FTMS 0 0 0 6976 239946.5625 0.8119966654191423 -3 0.1802253723144531 1 Unmodified _PAGTGHMTW_ nc|ENSG00000108509|O94983-6|CAMTA2 4.75600775471527 0.7486543447549536 5 {I|L} 1 9 10.713 0.0 0.0 1.1202 0.0 0.0 825.319025887817 0.0 825.319025887817 0.0 0.117405479247612 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1202 - 48 + 1 2.123 69360.8 1.0 2767 4208 6976 SUDHL4_400M_050219_1,6977 SUDHL4_400M_050219_1,6977,PAGTGHMTW False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 6978 36.814 800.0 40393.0 25 0 10192.0 -1 0 26 1185.8063495490087 3554.3972192472265 3 1186.813037097454 MULTI CID FTMS 0 0 0 6976 59093.93359375 0.603019080105383 1 -0.0501441955566406 2 5 W 1 -1 5.4846 0.0 0.0 0.1543 0.0 0.0 2367.8576207138267 997.459307202096 3365.316927915923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.1543 - 1 + 1 2.123 39087.7 0.4600000083446502 2768 4208 6976 SUDHL4_400M_050219_1,6978 SUDHL4_400M_050219_1,6978, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6979 36.815 56.0 779650.0 25 0 106070.0 + 42198 VSEPLAPL 8 76 413.2390174549228 824.4634819766457 2 413.2385436892509 MULTI CID FTMS 0 0 0 6976 517120.53125 0.7715070402257587 -16 0.8017768859863281 3 Unmodified _VSEPLAPL_ REV__ENSG00000158828|ENST00000321556|PINK1;REV__ENST00000400490.2_1_1:20972014-20977181:+|nuORF;REV__ENST00000492302.1_1_1:20975445-20977181:+|nuORF;REV__nc|ENSG00000158828|Q9BXM7-2|PINK1 2.577480529830294 0.808687252328423 5 {I|L} 1 -1 12.218 0.0 0.0 1.482 0.0 0.0 693.3686924032066 0.0 693.3686924032066 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.482 + + 4 + 1 2.123 39355.0 1.0 2769 4208 6976 SUDHL4_400M_050219_1,6979 SUDHL4_400M_050219_1,6979,VSEPLAPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6980 36.819 216.0 417000.0 25 0 81586.0 + 17338 KLWEAESKL 9 103 552.308574824903 1102.6025967166058 2 552.3086425662041 MULTI CID FTMS 0 0 0 6976 252622.484375 0.2345021513843075 -4 0.24530029296875 4 Unmodified _KLWEAESKL_ ENSG00000159055|ENST00000290130|MIS18A 118.20947048124656 0.0022344674775625 5 {I|L}KWEAESK{I|L} 9 2 + 97.565 0.0 0.0 8.8486 8.8486 87.672 0.0 0.0 0.0 73.91949716988933 12.587418566968154 12.587418566968154 1.817496819840656 0 2.7416440611282624 0.0 1.5356668758921828 0.0 {I|L}KWEAESK{I|L};K{I|L}WEAESK{I|L};[K{I|L}]WEAESK{I|L};{I|L}KWEAE{I|L}[KS];K{I|L}WEAE{I|L}[KS];{I|L}KWEAE[KT]V;K{I|L}WEAE[KT]V;[K{I|L}]WEATDK{I|L};[WE]{I|L}KAESK{I|L};[K{I|L}]WTEADK{I|L} 8.8486;8.6837;7.2675;7.1783;7.0134;6.4175;6.2527;5.7874;5.6098;5.2722 -;+;+;-;-;-;-;-;-;- + 767 + 1 2.123 71510.0 1.0 2770 4208 6976 SUDHL4_400M_050219_1,6980 SUDHL4_400M_050219_1,6980,KLWEAESKL True True KLWEAESKL 36.819283 552.308642566204 6105507.5 6976.0 ENSG00000159055|ENST00000290130|MIS18A 6.723911285400391 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6981 36.825 297.0 189050.0 25 0 21895.0 + 21689 LPLPTSSK 8 107 421.7508639121425 841.487174891085 2 421.7512084841728 MULTI CID FTMS 0 0 0 6976 172368.328125 0.6048869099533519 -20 0.950664520263672 5 Unmodified _LPLPTSSK_ REV__ENSG00000151320|ENST00000280979|AKAP6 7.910154910731844 0.7763180056447161 5 AWSR 4 -1 14.778 0.0 0.0 1.7562 0.0 0.0 323.2271784084663 0.0 323.2271784084663 0.0 13.519106958844134 0.0 0.0 0 0.0 0.0 0.0 0.0 AWSR 1.7562 - 30 + 1 2.123 51131.7 1.0 2771 4208 6976 SUDHL4_400M_050219_1,6981 SUDHL4_400M_050219_1,6981,LPLPTSSK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6982 36.839 800.0 125140.0 25 0 8205.9 -1 0 104 881.9123726664106 1761.8101923996212 2 881.9131957888603 MULTI CID FTMS 0 0 0 6976 111408.265625 0.5045914514413115 -8 0.5411224365234375 6 5 [NP]{I|L}N[KT]{[YC]|[HE]}EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 72.157 0.0 0.0 4.0956 4.0956 76.619 0.0 0.0 0.0 2.498774732165998 43.77899643593331 2.498774732165998 1.7415675927848184 0 1.305462187404089 1.0 0.3494850021680094 0.8494850021680094 [NP]{I|L}N[KT]{[YC]|[HE]}EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NE[PA][TP]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}N[{M(Oxidation (M))|F}V][RD]QRDQ;[NP]{I|L}N{M(Oxidation (M))|F}[KC][{M(Oxidation (M))|F}V]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}RQ[RD][{M(Oxidation (M))|F}V]N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.0956;3.9968;3.6073;3.0056;3.0041 -;-;-;-;- 591 1 2.123 71234.9 0.6100000143051147 2772 4208 6976 SUDHL4_400M_050219_1,6982 SUDHL4_400M_050219_1,6982, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6983 36.844 308.0 184390.0 25 0 14658.0 11632 GLALPEWN 8 109 450.2339220298281 0 450.2344238162041 PEAK CID FTMS 0 0 0 6976 97865.7109375 1.0 0 0.0 7 Unmodified _GLALPEWN_ ENST00000377242.7_1_10:20105398-20106118:+|nuORF 10.183394434864962 0.5394990767616434 5 G 1 7 3.9794 0.0 0.0 0.44292 0.0 0.0 770.3580437893453 68.0512941949828 838.4093379843281 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 0.44292 + + 40 + 1 2.123 50330.4 1.0 2773 4208 6976 SUDHL4_400M_050219_1,6983 SUDHL4_400M_050219_1,6983,GLALPEWN False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 6985 36.85 101.0 443940.0 25 0 50083.0 + -1 AMNPTNTVF 9 84 505.73443426326816 1009.4543155933364 2 505.7344238162041 MULTI CID FTMS 0 0 0 6984 393307.46875 0.4123495925300929 3 -0.0959358215332031 1 Oxidation (M) _AM(Oxidation (M))NPTNTVF_ ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000443628.2_1_X:114011085-114011187:-|nuORF 26.88365393820708 0.1891292719743517 5 MV{M(Oxidation (M))|F} 3 -1 22.536 0.0 0.0 2.2325 0.0 0.0 614.2733901556395 0.0 614.2733901556395 0.0 11.566818653688529 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 MV{M(Oxidation (M))|F} 2.2325 - 83 + 1 2.135 40924.5 1.0 2774 4209 6984 SUDHL4_400M_050219_1,6985 SUDHL4_400M_050219_1,6985,AMNPTNTVF False False AMNPTNTVF 36.850217 505.734423816204 12505378.0 6984.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;;ENST00000443628.2_1_X:114011085-114011187:-|nuORF 6.877006848653157 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6986 36.852 82.0 600100.0 25 0 106800.0 -1 0 77 398.22993408556624 794.4453152379325 2 398.7303039431572 MULTI CID FTMS 0 0 0 6984 302705.1875 0.92816262804729 -2 0.0902862548828125 2 5 D 1 -1 4.2217 0.0 0.0 0.5314 0.0 0.0 397.25004653851687 279.1451815240844 676.3952280626013 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 D 0.5314 - 4 + 1 2.135 43657.8 1.0 2775 4209 6984 SUDHL4_400M_050219_1,6986 SUDHL4_400M_050219_1,6986, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6988 36.86 278.0 251040.0 25 0 25439.0 + 31065 RLIQESPTL 9 86 528.8060277516115 1055.597502570023 2 528.8067504763603 MULTI CID FTMS 0 0 0 6987 239993.03125 0.3249379426667585 -3 0.0981712341308593 1 Unmodified _RLIQESPTL_ ENSG00000111684|ENST00000261407|LPCAT3;ENST00000535479.5_1_12:7086310-7087113:-|nuORF;nc|ENSG00000111684|Q6P1A2-2|LPCAT3 60.07390631473393 0.0260411565414776 5 [R{I|L}]{I|L}QESPT{I|L} 9 0 + 57.954 0.0 0.0 5.4902 5.4902 83.509 0.0 0.0 0.0 3.2568864632742844 26.63836392716492 3.2568864632742844 3.7371250542002334 0 1.579689690656103 0.0 0.805462187404089 0.0 + + [R{I|L}]{I|L}QESPT{I|L};[TP]{I|L}[KA]E{[RE]|[WV]}{I|L};[R{I|L}]{I|L}QTDPT{I|L};[R{I|L}]{I|L}[AG]ESPT{I|L};[TP]{I|L}[KA]W{NN|[MP]|[D{I|L}]|[EV]}{I|L};[R{I|L}]{I|L}[AG]TDPT{I|L};[R{I|L}]{I|L}QEG{NN|[MP]|[D{I|L}]|[EV]}{I|L};[R{I|L}]{I|L}QTS[EP]{I|L};[{I|L}T]P[KA]E{[RE]|[WV]}{I|L};[R{I|L}]{I|L}[AG]EG{NN|[MP]|[D{I|L}]|[EV]}{I|L} 5.4902;5.1362;4.8443;4.6179;4.1133;3.972;3.6922;3.5647;3.1001;2.8199 +;-;-;-;-;-;-;-;-;- + 727 1 2.135 61498.5 1.0 2776 4210 6987 SUDHL4_400M_050219_1,6988 SUDHL4_400M_050219_1,6988,RLIQESPTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6989 36.864 249.0 221550.0 25 0 14106.0 33700 SKHAAAAR 8 123 406.2300399848761 810.4455270365522 2 406.2305786013603 MULTI CID FTMS 0 0 0 6987 39110.37890625 0.4145256543888744 1 -0.0399856567382812 2 Unmodified _SKHAAAAR_ ENSG00000145506|ENST00000296849|NKD2;nc|ENSG00000145506|Q969F2-2|NKD2 2.302733041254933 0.8103549651115762 5 P 1 8 0.9691 0.0 0.0 0.11958 0.0 0.0 625.3400868283476 85.03013788394765 710.3702247122952 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.11958 - 14 + 1 2.135 44587.2 1.0 2777 4210 6987 SUDHL4_400M_050219_1,6989 SUDHL4_400M_050219_1,6989,SKHAAAAR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6990 36.878 800.0 327000.0 25 0 23052.0 + 31061 RLIGIYKTY 9 158 563.8347636057887 1125.6549742783773 2 563.8347045779228 MULTI CID FTMS 0 0 0 6987 185341.46875 0.2840634923006878 -4 0.1599349975585937 3 Unmodified _RLIGIYKTY_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 75.76082778847304 0.0188720312721366 5 [R{I|L}]{I|L}G{I|L}YKTY 9 0 + 74.862 0.0 0.0 6.6505 6.6505 90.228 0.0 0.0 0.0 7.408037477650637 48.6215311505913 7.408037477650637 8.927900303521312 0 1.674742501084005 0.0 0.3807196863200844 1.048455006504028 + + [R{I|L}]{I|L}G{I|L}YKTY;[{I|L}A][RV]{I|L}YKTY;{[VA]|[{I|L}G]}[R{I|L}]{I|L}YKTY;[R{I|L}]{I|L}G{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}S[QP];[R{I|L}]{I|L}G{I|L}[SG]VS[QP];[{I|L}A][RV]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}S[QP];[{I|L}A][RV]{I|L}[SG]VS[QP];[QP]GR[KQ][{I|L}A][KT];{[VA]|[{I|L}G]}[R{I|L}]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}S[QP];{[VA]|[{I|L}G]}[R{I|L}]{I|L}[SG]VS[QP] 6.6505;5.8574;5.1412;1.7894;1.6822;0.99622;0.88911;0.44353;0.28003;0.17292 +;-;-;-;-;-;-;-;-;- + 328 1 2.135 196764.3 0.7699999809265137 2778 4210 6987 SUDHL4_400M_050219_1,6990 SUDHL4_400M_050219_1,6990,RLIGIYKTY True True RLIGIYKTY 36.878204 563.834704577923 6357695.5 6987.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 5.042624115943909 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6991 36.892 800.0 115240.0 25 0 13144.0 -1 0 112 909.0604822703108 2724.1596174111323 3 909.3942138552666 MULTI CID FTMS 0 0 0 6987 185408.640625 0.3209109371938931 4 -0.1260986328125 4 5 [YG]SA[QT]Q[TP]Y 10 -1 38.412 0.0 0.0 1.41 0.0 0.0 0.0 1624.6576817436369 1624.6576817436369 -2.1485197591570966 0.0 -2.1485197591570966 0.0 0 0.0 2.0 1.385151878060192 0.6989700043360187 [YG]SA[QT]Q[TP]Y 1.41 - 8344 1 2.135 66365.3 0.7400000095367432 2779 4210 6987 SUDHL4_400M_050219_1,6991 SUDHL4_400M_050219_1,6991, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6993 36.897 91.0 555990.0 25 0 124100.0 + 34368 SLTGRLDEV 9 69 495.26685550372326 988.5191580742464 2 495.2668334841728 MULTI CID FTMS 0 0 0 6992 545168.375 0.1132412675365895 5 -0.23870849609375 1 Unmodified _SLTGRLDEV_ ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6 36.506200033944 0.094635877243972 5 {[TV]|[{I|L}S]}T[PS]WVTV 9 5 + 54.051 0.0 0.0 5.4679 5.4679 83.782 0.0 0.0 0.0 14.77121254719662 13.26606256887672 13.26606256887672 4.018637558036673 0 1.0 2.0 0.5 0.0 {[TV]|[{I|L}S]}T[PS]WVTV;{[TV]|[{I|L}S]}VWGEVTV;{[TV]|[{I|L}S]}T{[NV]|[RG]}{NN|[MP]|[D{I|L}]|[EV]}EV;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}TEVTV;{[TV]|[{I|L}S]}VWG{[TV]|[{I|L}S]}EV;{[TV]|[{I|L}S]}T{[NV]|[RG]}QQTV;{NN|[MP]|[D{I|L}]|[EV]}[WK]EVTV;{[TV]|[{I|L}S]}[WK]{NN|[MP]|[D{I|L}]|[EV]}EV;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}T{[TV]|[{I|L}S]}EV;{NN|[MP]|[D{I|L}]|[EV]}[WK]{[TV]|[{I|L}S]}EV 5.4679;5.0614;4.1124;3.9736;3.9517;3.9343;3.9273;3.2558;2.864;2.8177 -;-;+;-;-;-;-;-;-;- + 395 1 2.135 44995.9 1.0 2780 4211 6992 SUDHL4_400M_050219_1,6993 SUDHL4_400M_050219_1,6993,SLTGRLDEV True True SLTGRLDEV 36.896837 495.266833484173 44198932.0 6992.0 nc|ENSG00000166888|P42226-3|STAT6;;nc|ENSG00000166888|P42226-2|STAT6;;ENSG00000166888|ENST00000300134|STAT6 0.4176977723836899 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6994 36.898 59.0 917840.0 25 0 136020.0 + 14562 IHPSSVSPF 9 87 485.7535601640635 969.492567394927 2 485.7537414431572 MULTI CID FTMS 0 0 0 6992 721275.625 0.9304549916451496 -2 0.0478706359863281 2 Unmodified _IHPSSVSPF_ REV__ENSG00000167595|ENST00000646935|PROSER3 23.1484247019978 0.2366544122328345 5 [HV]VS[TP]SP{M(Oxidation (M))|F} 9 -1 + 49.411 0.0 0.0 5.0966 5.0966 88.939 0.0 0.0 0.0 22.632192780232785 21.04850584736069 21.04850584736069 12.25772496747986 0 1.010638087671366 1.6989700043360187 1.3494850021680094 0.0 [HV]VS[TP]SP{M(Oxidation (M))|F};[HV]VS{[DA]|[EG]}VP{M(Oxidation (M))|F};[HV]WWVP{M(Oxidation (M))|F};[HV]{[DA]|[EG]}VVSP{M(Oxidation (M))|F};[HV]VWWP{M(Oxidation (M))|F};[YV]S[RP]S[YV];[{I|L}A][HT][TP]SP{M(Oxidation (M))|F};[HV][PA][TP]S[YV];[YV]S[R{M(Oxidation (M))|F}]V{[TV]|[{I|L}S]};[HV][PA][R{M(Oxidation (M))|F}]P{M(Oxidation (M))|F} 5.0966;3.8322;2.9397;2.7244;2.4293;2.1929;2.162;1.894;1.6827;1.6485 -;-;-;-;-;-;-;-;-;- 337 1 2.135 45570.8 1.0 2781 4211 6992 SUDHL4_400M_050219_1,6994 SUDHL4_400M_050219_1,6994,IHPSSVSPF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6995 36.903 267.0 300330.0 25 0 31635.0 + 17077 KLDVDAPRL 9 92 513.801016946102 1025.587480959004 2 513.8010742068291 MULTI CID FTMS 0 0 0 6992 183413.703125 1.0 0 0.0 3 Unmodified _KLDVDAPRL_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 45.739877483867886 0.0497104363764649 5 {I|L}KDVDVD{I|L}G 9 6 71.31 0.0 0.0 6.9531 0.0 0.0 0.0 68.05122553043202 68.05122553043202 60.71425585097637 0.0 0.0 0.0 0 0.5 0.9208187539523752 0.3252574989159953 0.0 {I|L}KDVDVD{I|L}G 6.9531 - 310 + 1 2.135 66257.8 1.0 2782 4211 6992 SUDHL4_400M_050219_1,6995 SUDHL4_400M_050219_1,6995,KLDVDAPRL True True KLDVDAPRL 36.903254 513.801074206829 1209441.375 6992.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 6.049912134806315 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6996 36.907 208.0 434080.0 25 0 24781.0 + 22698 LQEKQESLK 9 140 368.2067202768861 1101.5983314308585 3 368.5412170290947 MULTI CID FTMS 0 0 0 6992 132096.546875 1.0 0 0.0 4 Unmodified _LQEKQESLK_ REV__ENSG00000119326|ENST00000325551|CTNNAL1;REV__nc|ENSG00000119326|Q9UBT7-2|CTNNAL1 3.876331618118854 0.779363392565652 5 P 1 -1 8.0277 0.0 0.0 0.72874 0.0 0.0 986.5351275507788 0.0 986.5351275507788 0.0 0.3762038178641349 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.72874 - 43 + 1 2.135 78791.4 1.0 2783 4211 6992 SUDHL4_400M_050219_1,6996 SUDHL4_400M_050219_1,6996,LQEKQESLK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 6997 36.92 715.0 212770.0 25 0 21488.0 + 37446 TLDITPHTV 9 176 498.7717685859838 0 498.7713195681572 PEAK CID FTMS 0 0 0 6992 90336.109375 0.7968501221701296 -2 0.0478706359863281 5 Unmodified _TLDITPHTV_ ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2 71.13359017698441 0.0166968128596244 5 VETS 4 8 30.22 0.0 0.0 3.0356 0.0 0.0 214.13318812345105 362.1831453912719 576.3163335147229 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.589136830878453 0.0 VETS 3.0356 - 352 + 1 2.135 118049.7 1.0 2784 4211 6992 SUDHL4_400M_050219_1,6997 SUDHL4_400M_050219_1,6997,TLDITPHTV True True TLDITPHTV 36.919598 498.771319568157 694025.375 6992.0 nc|ENSG00000144554|Q9BXW9-1|FANCD2;;ENSG00000144554|ENST00000675286|FANCD2;;nc|ENSG00000144554|Q9BXW9-3|FANCD2 7.875922203063965 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 6998 36.933 800.0 82753.0 25 0 5086.7 -1 0 91 865.898928520826 1729.7833041084518 2 866.3982421755791 MULTI CID FTMS 0 0 0 6992 84663.5859375 0.1470040708297462 -10 0.552825927734375 6 5 WN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 7 -1 20.986 0.0 0.0 1.2132 0.0 0.0 844.4172186422782 0.0 844.4172186422782 0.0 -9.155462488490684 -9.155462488490684 0.0 0 0.5 0.0 0.0 0.0 WN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 1.2132 - 345 1 2.135 49640.7 0.5400000214576721 2785 4211 6992 SUDHL4_400M_050219_1,6998 SUDHL4_400M_050219_1,6998, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 6999 36.94 371.0 255780.0 25 0 20283.0 + -1 LGGTMKSLE 9 127 476.2444184413587 950.4742839495174 2 476.2431213259697 MULTI CID FTMS 0 0 0 6992 98957.5234375 0.6835376102199926 -1 0.0399856567382812 7 Oxidation (M) _LGGTM(Oxidation (M))KSLE_ REV__ENSG00000016490|ENST00000394711|CLCA1 16.942295170755138 0.3780752226737986 5 {[VA]|[{I|L}G]}A[PA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VY 9 -1 {[VA]|[{I|L}G]}A[PA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V + + 16.99 -2.4539 -0.31894 1.7875 1.7875 52.719 0.0 0.0 0.0 0.0 0.5360498482393439 0.0 0.0 0 0.0 0.0 0.0 0.0 {[VA]|[{I|L}G]}A[PA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VY 1.7875 - 337 + 1 2.135 74100.8 1.0 2786 4211 6992 SUDHL4_400M_050219_1,6999 SUDHL4_400M_050219_1,6999,LGGTMKSLE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7001 36.947 143.0 327140.0 25 0 31731.0 + 31234 RLSELGITQA 10 79 544.3089705186927 1086.6033881041851 2 544.3102905154228 MULTI CID FTMS 0 0 0 7000 195594.0 0.2233112531744837 4 -0.190643310546875 1 Unmodified _RLSELGITQA_ ENSG00000171241|ENST00000303383|SHCBP1 26.020703789607367 0.3840598856887971 5 [QT][KQ]{I|L}G{I|L}T[QA] 10 4 + 38.205 0.0 0.0 3.516 3.516 85.032 0.0 0.0 0.0 1.249387366082999 30.757659435244733 1.249387366082999 15.083559388717376 0 0.7302046884880937 0.0 0.4247425010840047 0.0 [QT][KQ]{I|L}G{I|L}T[QA];[QT][KQ]{I|L}G{I|L}G{[QD]|[EN]|[WG]|[KD]|[RS]};{I|L}{I|L}[WM][KP]G{[QD]|[EN]|[WG]|[KD]|[RS]};[QT][WK][KP]G{[QD]|[EN]|[WG]|[KD]|[RS]} 3.516;2.1279;1.3994;1.0231 -;-;-;- 113 1 2.152 40687.9 1.0 2787 4212 7000 SUDHL4_400M_050219_1,7001 SUDHL4_400M_050219_1,7001,RLSELGITQA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7002 36.952 280.0 381030.0 25 0 108390.0 25605 NFLNPYSRI 9 137 375.2013777848676 0 375.2012206912041 PEAK CID FTMS 0 0 0 7000 144798.4375 0.2695466162564378 -29 1.2664909362792969 2 Unmodified _NFLNPYSRI_ ENST00000305364.8_1_8:27144762-27145065:-|nuORF 3.944395688203298 0.3444685223463734 5 S 1 8 2.3907 0.0 0.0 0.31945 0.0 0.0 374.1946265221965 284.13129602603755 658.3259225482341 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 + S 0.31945 + + 8 + 1 2.152 85863.7 1.0 2788 4212 7000 SUDHL4_400M_050219_1,7002 SUDHL4_400M_050219_1,7002,NFLNPYSRI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7004 36.957 79.0 632870.0 25 0 61721.0 + 42671 VTVRPGLAM 9 83 472.2733061746492 0 472.2733337283134 PEAK CID FTMS 0 0 0 7003 569243.875 0.7811706347011085 4 -0.2498512268066406 1 Unmodified _VTVRPGLAM_ ENSG00000099974|ENST00000215770|DDTL;ENSG00000099977|ENST00000398344|DDT;ENST00000444947.2_1_22:24315904-24316657:-|nuORF;nc|ENSG00000099977|P30046-2|DDT 49.55428908609986 0.0328875595922215 5 A{I|L}R 3 8 18.104 0.0 0.0 1.9208 0.0 0.0 149.05288568738587 450.2306234624914 599.2835091498773 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 A{I|L}R 1.9208 - 138 + 1 2.152 45612.6 1.0 2789 4213 7003 SUDHL4_400M_050219_1,7004 SUDHL4_400M_050219_1,7004,VTVRPGLAM True True VTVRPGLAM 36.956797 472.273333728313 11515519.0 7003.0 ENSG00000099977|ENST00000398344|DDT;;ENSG00000099974|ENST00000215770|DDTL;;nc|ENSG00000099977|P30046-2|DDT;;ENST00000444947.2_1_22:24315904-24316657:-|nuORF 8.109116713205973 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7005 36.964 422.0 190690.0 25 0 23610.0 + 17094 KLFEDGKTGF 10 112 571.2981366615521 1140.581720389904 2 571.2984496951103 MULTI CID FTMS 0 0 0 7003 145143.890625 0.6456751097671646 -1 0.0118942260742187 2 Unmodified _KLFEDGKTGF_ ENSG00000278053|ENST00000617633|DDX52 57.10758569107544 0.0441734977746303 5 K{I|L}{M(Oxidation (M))|F}EDGKTG{M(Oxidation (M))|F} 10 0 + 80.346 0.0 0.0 7.0443 7.0443 92.564 0.0 0.0 0.0 16.53212513775344 9.208187539523747 9.208187539523747 9.208187539523747 0 1.6307196863200843 0.0 0.9247425010840048 0.0 + + K{I|L}{M(Oxidation (M))|F}EDGKTG{M(Oxidation (M))|F};K{I|L}{M(Oxidation (M))|F}EDGKAAY;K{I|L}{M(Oxidation (M))|F}E{[HG]|PP}T{M(Oxidation (M))|F}Y;K{I|L}{M(Oxidation (M))|F}E{[HG]|PP}TY{M(Oxidation (M))|F};K{I|L}{M(Oxidation (M))|F}[WH]T{M(Oxidation (M))|F}Y;K{I|L}{M(Oxidation (M))|F}[WH]TY{M(Oxidation (M))|F};K{I|L}{M(Oxidation (M))|F}E{[HG]|PP}E[PG]Q;K{I|L}[WH]{M(Oxidation (M))|F}T{M(Oxidation (M))|F}Y;K{I|L}{M(Oxidation (M))|F}E[WH][PG]Q;K{I|L}[WH]{M(Oxidation (M))|F}TY{M(Oxidation (M))|F} 7.0443;6.237;4.8525;4.6981;4.2845;4.1301;3.6268;3.3612;3.2968;3.2068 +;-;-;-;-;-;-;-;-;- + 1276 + 1 2.152 68200.6 1.0 2790 4213 7003 SUDHL4_400M_050219_1,7005 SUDHL4_400M_050219_1,7005,KLFEDGKTGF True True KLFEDGKTGF 36.964327 571.29844969511 830401.75 7003.0 ENSG00000278053|ENST00000617633|DDX52 7.032663186391194 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7006 36.978 800.0 231930.0 25 0 23271.0 + 38839 TVIDEVRTGTY 11 117 627.3214792233083 1252.6284055134165 2 627.3216430544853 MULTI CID FTMS 0 0 0 7003 176986.59375 1.0 0 0.0 3 Unmodified _TVIDEVRTGTY_ ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000167552|Q71U36-2|TUBA1A 46.0223103267499 0.1396584557920269 5 {[TV]|[{I|L}S]}{I|L}DEV[WK]TY 10 3 + 67.396 0.0 0.0 5.3803 5.3803 91.517 0.0 0.0 0.0 53.4163750790475 3.0102999566398125 3.0102999566398125 26.408787787016188 0 0.6989700043360187 2.0 1.1989700043360187 0.0 {[TV]|[{I|L}S]}{I|L}DEV[WK]TY;{[TV]|[{I|L}S]}{I|L}DEV[NP][VG][NP];{[TV]|[{I|L}S]}D{I|L}VV[MN]Y{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}D[HM]D[{I|L}V][NP];{[TV]|[{I|L}S]}{I|L}D[HM]Q[KA][NP];{NN|[MP]|[D{I|L}]|[EV]}S{I|L}VV[MN]Y{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}E[HN]VVD{I|L}{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}E[HN]DVV{I|L}{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WK]TY 5.3803;3.2721;2.5774;2.4266;1.9459;1.5332;1.1167;0.73583;0.0098463 -;-;-;-;-;-;-;-;- 343 + 1 2.152 139431.6 0.7799999713897705 2791 4213 7003 SUDHL4_400M_050219_1,7006 SUDHL4_400M_050219_1,7006,TVIDEVRTGTY False True TVIDEVRTGTY 36.978164 627.321643054485 1052952.5 7003.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;;ENSG00000167553|ENST00000301072|TUBA1C;;ENSG00000167552|ENST00000301071|TUBA1A;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000123416|P68363-2|TUBA1B 5.450980027516683 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7008 36.983 44.0 1027200.0 25 0 96352.0 + 44140 YLDPAQQNL 9 88 531.2662032071577 1060.5178534811153 2 531.2670776247978 MULTI CID FTMS 0 0 0 7007 826158.6875 0.6611161614454056 3 -0.2236976623535156 1 Unmodified _YLDPAQQNL_ ENST00000421406.1_1_1:247353282-247372753:-|nuORF 26.88365393820708 0.1891292719743517 5 [Y{I|L}]D{M(Oxidation (M))|F} 4 6 27.536 0.0 0.0 2.5965 0.0 0.0 0.0 519.2445129872277 519.2445129872277 4.443995405325097 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}]D{M(Oxidation (M))|F} 2.5965 - 376 1 2.152 40396.0 1.0 2792 4214 7007 SUDHL4_400M_050219_1,7008 SUDHL4_400M_050219_1,7008,YLDPAQQNL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7009 36.986 154.0 377510.0 25 0 46579.0 44069 YISGTPHALI 10 100 536.295965240538 1070.5773775478758 2 536.3006469607353 MULTI CID FTMS 0 0 0 7007 282757.15625 0.3018339685652281 6 -0.3524971008300781 2 Unmodified _YISGTPHALI_ ENSG00000164896|ENST00000297532|FASTK;ENST00000467237.5_1_7:150774601-150776190:-|nuORF;ENST00000482806.5_1_7:150774217-150777853:-|nuORF;nc|ENSG00000164896|Q14296-2|FASTK;nc|ENSG00000164896|Q14296-3|FASTK;nc|ENSG00000164896|Q14296-4|FASTK 21.74664581756881 0.480091245866545 5 {[NV]|[RG]}[MN][VP]TA{I|L}{I|L} 10 6 + 27.438 0.0 0.0 2.5629 2.5629 82.99 0.0 0.0 0.0 5.983996352380103 7.248096566013871 5.983996352380103 12.376558577268604 0 0.4247425010840047 1.0 0.8807196863200843 0.0 {[NV]|[RG]}[MN][VP]TA{I|L}{I|L};[{I|L}A][C(Carbamidomethyl (C))N][VP]TA{I|L}{I|L};HH[PS][VP]TA{I|L}{I|L};[{I|L}A][PS]{[SA]|[TG]}QTA{I|L}{I|L};[PA]{[TV]|[{I|L}S]}{[SA]|[TG]}QTA{I|L}{I|L} 2.5629;1.4068;1.0676;0.89631;0.82235 -;-;-;-;- 198 1 2.152 49422.8 1.0 2793 4214 7007 SUDHL4_400M_050219_1,7009 SUDHL4_400M_050219_1,7009,YISGTPHALI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7010 36.989 139.0 389580.0 25 0 40849.0 + 33771 SLAQYNPKL 9 95 517.2880986877664 1032.5616444423326 2 517.2881957888603 MULTI CID FTMS 0 0 0 7007 248553.140625 0.6656300918979039 3 -0.2236976623535156 3 Unmodified _SLAQYNPKL_ ENSG00000117461|ENST00000262741|PIK3R3;ENSG00000145675|ENST00000521381|PIK3R1;ENST00000520550.1_1_5:67588878-67591317:+|nuORF;nc|ENSG00000117461|Q92569-2|PIK3R3;nc|ENSG00000117461|Q92569-3|PIK3R3;nc|ENSG00000145675|P27986-2|PIK3R1;nc|ENSG00000145675|P27986-3|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1;nc|ENSG00000145675|P27986-5|PIK3R1 22.736283301280096 0.2418982879461534 5 {[TV]|[{I|L}S]}AQYNPK{I|L} 9 0 + 42.77 0.0 0.0 4.1421 4.1421 75.365 0.0 0.0 0.0 16.343149290595775 2.9804479517284577 2.9804479517284577 0.5799194697768684 0 0.7059771852360797 2.0 0.0 0.0 + + {[TV]|[{I|L}S]}AQYNPK{I|L};{[TV]|[{I|L}S]}AQYNKP{I|L};{[TV]|[{I|L}S]}A[AG]YNPK{I|L};{[TV]|[{I|L}S]}AQYGGPK{I|L};{[TV]|[{I|L}S]}A[AG]YNKP{I|L};{[TV]|[{I|L}S]}AQYGGKP{I|L};{[TV]|[{I|L}S]}A[AG]YGGPK{I|L};{[TV]|[{I|L}S]}A[AG]YGGKP{I|L};[Q{I|L}]{[SA]|[TG]}YNPK{I|L};[Q{I|L}]{[SA]|[TG]}YNKP{I|L} 4.1421;4.0859;3.2503;3.2503;3.1942;3.1942;2.3628;2.3066;0.87049;0.81433 +;-;-;-;-;-;-;-;-;- + 469 + 1 2.152 46518.9 1.0 2794 4214 7007 SUDHL4_400M_050219_1,7010 SUDHL4_400M_050219_1,7010,SLAQYNPKL False True SLAQYNPKL 36.988839 517.28819578886 2531286.0 7007.0 nc|ENSG00000145675|P27986-5|PIK3R1;;ENSG00000117461|ENST00000262741|PIK3R3;;ENST00000520550.1_1_5:67588878-67591317:+|nuORF;;ENSG00000145675|ENST00000521381|PIK3R1;;nc|ENSG00000145675|P27986-3|PIK3R1;;nc|ENSG00000145675|P27986-4|PIK3R1;;nc|ENSG00000117461|Q92569-3|PIK3R3;;nc|ENSG00000117461|Q92569-2|PIK3R3;;nc|ENSG00000145675|P27986-2|PIK3R1 6.370669682820638 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7011 37.003 800.0 198750.0 25 0 20645.0 + 38856 TVIPNSHVYY 10 136 596.8036336939875 1191.592714454775 2 596.8037597537041 MULTI CID FTMS 0 0 0 7007 160469.28125 0.7400657135824019 6 -0.3524971008300781 4 Unmodified _TVIPNSHVYY_ ENSG00000117133|ENST00000370654|RPF1 41.95555342248728 0.1369168616057562 5 {[TV]|[{I|L}S]}{I|L}PNSHVYY 10 0 + 53.994 0.0 0.0 4.5313 4.5313 84.882 0.0 0.0 0.0 19.58744750429966 5.796444610697478 5.796444610697478 9.164539485499256 0 1.0044321917401078 2.0 0.3807196863200844 0.0 + + {[TV]|[{I|L}S]}{I|L}PNSHVYY;{[TV]|[{I|L}S]}{I|L}PGGSHVYY;{[TV]|[{I|L}S]}[WM]YTPVVP;{[TV]|[{I|L}S]}{I|L}PNSHVNDP;{[TV]|[{I|L}S]}{I|L}[YT]CTP[TP]P;{[TV]|[{I|L}S]}{I|L}PT{[QS]|[NT]}{[{M(Oxidation (M))|F}H]|[RQ]}Y;{[TV]|[{I|L}S]}{I|L}P[C(Carbamidomethyl (C))R]{[{M(Oxidation (M))|F}H]|[RQ]}Y;{[TV]|[{I|L}S]}{I|L}PTY{[WT]|[RM]}DP;{[TV]|[{I|L}S]}{I|L}PNSHVGGDP;{[TV]|[{I|L}S]}{I|L}PGGSHVNDP 4.5313;3.7622;3.7334;3.6134;3.3329;3.2741;2.993;2.954;2.8473;2.8473 +;-;-;-;-;-;-;-;-;- + 793 + 1 2.152 117786.8 0.7099999785423279 2795 4214 7007 SUDHL4_400M_050219_1,7011 SUDHL4_400M_050219_1,7011,TVIPNSHVYY False True TVIPNSHVYY 37.002672 596.803759753704 2527937.75 7007.0 ENSG00000117133|ENST00000370654|RPF1 6.304694811503093 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7012 37.017 800.0 219670.0 25 0 12631.0 + 13109 HERPEFIAY 9 136 581.2881324750914 1160.5617120169827 2 581.2887451052666 MULTI CID FTMS 0 0 0 7007 154118.625 0.6909108127812019 -2 0.0380477905273437 5 Unmodified _HERPEFIAY_ ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF 24.95707706330732 0.2136420476055689 5 HE[WQ]{I|L}[KS]AY 9 5 + 51.57 0.0 0.0 4.4435 4.4435 76.795 0.0 0.0 0.0 29.801631028865287 5.723958705876768 5.723958705876768 0.9619222642825777 0 1.7302046884880935 1.0969100130080565 0.0 0.4247425010840047 HE[WQ]{I|L}[KS]AY;{[YC]|[HE]}R[EP]{M(Oxidation (M))|F}{I|L}AY;HD{I|L}[KS]E[RN]Y;HD{I|L}[WK][QT]AY;{[YC]|[HE]}[KG]E[KS]{I|L}AY;[{I|L}A]TV[C(Carbamidomethyl (C))N]H{I|L}AY;[{I|L}A][NS]{[WS]|[C(Carbamidomethyl (C)){I|L}]}H{I|L}AY;HE[WQ]{I|L}[KS]S{M(Oxidation (M))|F};{[YC]|[HE]}[WQ][KS]{I|L}AY;HD{I|L}{M(Oxidation (M))|F}[EP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F} 4.4435;4.3606;3.7611;3.521;3.1171;3.1055;2.9143;2.9109;2.8137;2.6786 -;+;-;-;-;-;-;-;-;- + 656 + 1 2.152 131733.7 0.699999988079071 2796 4214 7007 SUDHL4_400M_050219_1,7012 SUDHL4_400M_050219_1,7012,HERPEFIAY False True HERPEFIAY 37.016503 581.288745105267 1647391.25 7007.0 ENST00000550009.1_1_12:120875908-120876378:+|nuORF;;ENSG00000111775|ENST00000229379|COX6A1 6.9162917137146 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7013 37.021 240.0 264520.0 25 0 34776.0 + 12148 GQLPGLHEY 9 97 507.2564470719617 1012.4983412107232 2 507.2568237185478 MULTI CID FTMS 0 0 0 7007 159167.578125 0.9891958485863158 -1 0.026153564453125 6 Unmodified _GQLPGLHEY_ ENSG00000182446|ENST00000331134|NPLOC4;ENST00000571714.5_1_17:79526287-79532556:-|nuORF;ENST00000572346.5_1_17:79526287-79533945:-|nuORF;ENST00000572760.5_1_17:79526287-79533446:-|nuORF;ENST00000573519.5_1_17:79526287-79532556:-|nuORF 25.399314129420983 0.2080152500878129 5 {[QG]|[NA]}{I|L} 3 6 24.705 0.0 0.0 2.44 0.0 0.0 0.0 711.3109076992577 711.3109076992577 12.715299873086607 0.0 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 + {[QG]|[NA]}{I|L} 2.44 + + 143 1 2.152 52177.9 1.0 2797 4214 7007 SUDHL4_400M_050219_1,7013 SUDHL4_400M_050219_1,7013,GQLPGLHEY False True GQLPGLHEY 37.020984 507.256823718548 1105402.5 7007.0 ENST00000572346.5_1_17:79526287-79533945:-|nuORF;;ENST00000571714.5_1_17:79526287-79532556:-|nuORF;;ENSG00000182446|ENST00000331134|NPLOC4;;ENST00000573519.5_1_17:79526287-79532556:-|nuORF;;ENST00000572760.5_1_17:79526287-79533446:-|nuORF 6.405186176300049 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7014 37.027 328.0 172220.0 25 0 12073.0 + 18114 KTLEGIAAV 9 95 451.2708500417127 900.5271471502255 2 451.2699157595634 MULTI CID FTMS 0 0 0 7007 135710.96875 1.0 0 0.0 7 Unmodified _KTLEGIAAV_ ENSG00000169718|ENST00000306796|DUS1L;ENST00000578846.5_1_17:80018575-80018836:-|nuORF;ENST00000580731.1_1_17:80016678-80019221:-|nuORF 17.11289562659939 0.3734572693229295 5 {[MS]|[{M(Oxidation (M))|F}A]}[RP]G{I|L}AAV 9 4 {[MS]|[{M(Oxidation (M))|F}A]}[RP]G{I|L} + + 33.188 -1.1261 -0.17557 3.6854 3.6854 55.473 0.0 0.0 0.0 0.0 20.301434828014628 0.0 0.0 0 1.0 0.0 0.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}[RP]G{I|L}AAV 3.6854 - 114 + 1 2.152 48128.6 1.0 2798 4214 7007 SUDHL4_400M_050219_1,7014 SUDHL4_400M_050219_1,7014,KTLEGIAAV False True KTLEGIAAV 37.026932 451.269915759563 600895.5625 7007.0 ENST00000578846.5_1_17:80018575-80018836:-|nuORF;;ENST00000580731.1_1_17:80016678-80019221:-|nuORF;;ENSG00000169718|ENST00000306796|DUS1L 2.4902780850728354 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7015 37.037 563.0 453430.0 25 0 52171.0 11940 GMPGLGQV 8 202 379.6954331462691 0 379.6950561404228 PEAK CID FTMS 0 0 0 7007 111442.703125 0.1327359662462912 -2 0.0380477905273437 8 Unmodified _GMPGLGQV_ ENST00000478123.5_1_2:162173072-162175393:+|nuORF 5.760428011301431 0.5786759180849727 5 {I|L}H 2 7 8.0732 0.0 0.0 1.0659 0.0 0.0 262.09596154421274 242.11496912174064 504.21093066595336 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.0 {I|L}H 1.0659 - 70 + 1 2.152 196871.4 1.0 2799 4214 7007 SUDHL4_400M_050219_1,7015 SUDHL4_400M_050219_1,7015,GMPGLGQV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7016 37.042 234.0 238060.0 25 0 14654.0 + 33688 SIYPSPTGV 9 92 460.7393485701785 919.464144207157 2 460.7394897341728 MULTI CID FTMS 0 0 0 7007 106742.2265625 0.8395578653817415 2 -0.1525955200195312 9 Unmodified _SIYPSPTGV_ ENSG00000174231|ENST00000304992|PRPF8 28.486842064014134 0.1687311288560894 5 {[TV]|[{I|L}S]}[TA]S 5 6 23.732 0.0 0.0 2.5811 0.0 0.0 0.0 457.210945314832 457.210945314832 9.127990935773589 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}[TA]S 2.5811 - 96 1 2.152 51685.6 1.0 2800 4214 7007 SUDHL4_400M_050219_1,7016 SUDHL4_400M_050219_1,7016,SIYPSPTGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7018 37.05 203.0 344640.0 25 0 46449.0 + 40285 VGVARRPD 8 95 435.2509640550933 868.4873751769866 2 435.2509338259697 MULTI CID FTMS 0 0 0 7017 206376.65625 0.7069687352972505 4 -0.2606773376464844 1 Unmodified _VGVARRPD_ REV__ENSG00000107864|ENST00000265997|CPEB3;REV__nc|ENSG00000107864|Q8NE35-2|CPEB3 0.7936320650641473 0.8195151834710337 5 D 1 -1 5.9949 0.0 0.0 0.69026 0.0 0.0 434.27248948401535 316.15461145572505 750.4271009397404 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 D 0.69026 + + 8 + 1 2.161 58076.6 1.0 2801 4215 7017 SUDHL4_400M_050219_1,7018 SUDHL4_400M_050219_1,7018,VGVARRPD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7019 37.056 335.0 182510.0 25 0 11295.0 + 12091 GQHPGHWGF 9 108 511.73547776085513 1021.4564025885104 2 511.7349120974541 MULTI CID FTMS 0 0 0 7017 108986.53125 1.0 0 0.0 2 Unmodified _GQHPGHWGF_ ENSG00000117419|ENST00000372257|ERI3 11.640296217721598 0.521594087909532 5 [{I|L}A]A 3 9 22.676 0.0 0.0 2.22 0.0 0.0 0.0 763.2749505223571 763.2749505223571 9.57711861032834 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]A 2.22 - 192 1 2.161 54927.0 1.0 2802 4215 7017 SUDHL4_400M_050219_1,7019 SUDHL4_400M_050219_1,7019,GQHPGHWGF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7020 37.058 82.0 657570.0 25 0 48115.0 + 31586 RQPYAVSEL 9 82 531.7835433033287 1061.5525336734572 2 531.7852661013603 MULTI CID FTMS 0 0 0 7017 415749.6875 0.8836895848030784 -1 0.0641860961914062 3 Unmodified _RQPYAVSEL_ ENSG00000174444|ENST00000307961|RPL4;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF 39.94969957227396 0.0757326808254658 5 {[ES]|[DT]|[{I|L}C]}{I|L}[KS]AVSE{I|L} 10 5 + 57.362 0.0 0.0 5.4036 5.4036 85.274 0.0 0.0 0.0 3.802112417116064 41.16447767898898 3.802112417116064 6.064921830680703 0 1.1643943297944483 0.0 0.7302046884880937 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}[KS]AVSE{I|L};{[QN]|[E{I|L}]|[KN]}S[KS]AVSE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVSE{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}[KS]AWE{I|L};{NN|[MP]|[D{I|L}]|[EV]}T[KS]AVSE{I|L};[PA]Q[YR]VSE{I|L};{[QN]|[E{I|L}]|[KN]}S[KS]AWE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AWE{I|L};[PA][AG][YR]VSE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[R{M(Oxidation (M))|F}]VDE{I|L} 5.4036;4.8323;4.7095;4.3173;4.0665;4.0511;3.746;3.6283;3.1837;3.1788 -;-;+;-;-;-;-;-;-;- + 301 1 2.161 48046.4 1.0 2803 4215 7017 SUDHL4_400M_050219_1,7020 SUDHL4_400M_050219_1,7020,RQPYAVSEL True True RQPYAVSEL 37.058032 531.78526610136 3223103.75 7017.0 ENST00000566622.5_1_15:66794044-66797161:-|nuORF;;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;;ENSG00000174444|ENST00000307961|RPL4;;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;;ENST00000567229.5_1_15:66795359-66797161:-|nuORF 6.275057474772136 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7021 37.061 162.0 396040.0 25 0 32726.0 + 33645 SISKALVAY 9 98 476.2797387992696 950.5449246653392 2 476.2801086306572 MULTI CID FTMS 0 0 0 7017 154824.5 0.2946284722015735 -2 0.0903396606445312 4 Unmodified _SISKALVAY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000339471.8_1_19:39923915-39924228:-|nuORF 22.736283301280096 0.2418982879461534 5 SN{I|L}VTVAY 8 5 38.367 0.0 0.0 4.0363 0.0 0.0 85.08984572578281 0.0 85.08984572578281 0.0 21.377486799757293 0.0 0.0 0 0.8182503180159344 0.0 0.1079495689832512 0.0 SN{I|L}VTVAY 4.0363 - 501 1 2.161 56640.0 1.0 2804 4215 7017 SUDHL4_400M_050219_1,7021 SUDHL4_400M_050219_1,7021,SISKALVAY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7022 37.065 227.0 232620.0 25 0 14817.0 + 2197 AQAFIHNSL 9 94 500.7649526746605 999.5153524161208 2 500.7644225955009 MULTI CID FTMS 0 0 0 7017 124676.4453125 0.5142034887482558 -1 0.0641860961914062 5 Unmodified _AQAPIPAWF_ ENSG00000225921|ENST00000451315|NOL7 12.531546534597751 0.4974689918368763 5 [QA]A 3 6 23.2 0.0 0.0 2.3211 0.0 0.0 0.0 726.3599013265302 726.3599013265302 10.10090614668492 0.0 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 + [QA]A 2.3211 + + 126 1 2.161 47617.0 1.0 2805 4215 7017 SUDHL4_400M_050219_1,7022 SUDHL4_400M_050219_1,7022,AQAPIPAWF False False AQAFIHNSL 37.06548 500.764422595501 1384187.5 7017.0 ENSG00000225921|ENST00000451315|NOL7 6.423380374908447 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7023 37.079 800.0 192970.0 25 0 18917.0 + 9484 FLDESRSTQYM 11 116 688.8107800321675 1375.6070071311349 2 688.8100463747978 MULTI CID FTMS 0 0 0 7017 116676.7890625 0.5943272748516154 -1 0.0641860961914062 6 Unmodified _FLDESRSTQYM_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 64.69154705217129 0.0501048056983406 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[MT]QVTQYM 11 4 + 61.915 0.0 0.0 4.501 4.501 79.321 0.0 0.0 0.0 4.774149665429036 27.842259119186693 4.774149665429036 2.992953198672268 0 1.8807196863200843 0.0 0.2887254899964357 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[MT]QVTQYM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[PS]ED{I|L}{M(Oxidation (M))|F}YM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[MT]QQHD{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}[MT]QQHD{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[MT]QVT[AG]YM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[MT][AG]VTQYM;{M(Oxidation (M))|F}{I|L}DESNA[RD]{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[PS]K{M(Oxidation (M))|F}TQYM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DWWSTQYM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DHS{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{M(Oxidation (M))|F}YM 4.501;4.2834;4.0505;3.8512;3.8374;3.8374;3.7744;3.774;3.6761;3.6565 -;-;-;-;-;-;-;-;-;- 2036 1 2.161 112676.2 0.6299999952316284 2806 4215 7017 SUDHL4_400M_050219_1,7023 SUDHL4_400M_050219_1,7023,FLDESRSTQYM True True FLDESRSTQYM 37.079315 688.810046374798 1253050.125 7017.0 ENSG00000183207|ENST00000595090|RUVBL2;;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;;nc|ENSG00000183207|Q9Y230-2|RUVBL2 7.9138485590616865 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7024 37.088 515.0 360260.0 25 0 39713.0 + 14085 IAPPVPLKA 9 148 453.2945198219893 904.5744867107786 2 453.2942687869072 MULTI CID FTMS 0 0 0 7017 102346.1015625 0.1478924990286734 -5 0.1902847290039062 7 Unmodified _IAPPVPLKA_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 26.88365393820708 0.1891292719743517 5 [{I|L}A]PPV[{I|L}P]KA 9 0 + 44.771 0.0 0.0 4.9493 4.9493 90.611 0.0 0.0 0.0 25.7902268778706 7.335523339748221 7.335523339748221 44.77053597683239 0 0.4247425010840047 1.6989700043360187 0.0 0.5994850021680094 + + [{I|L}A]PPV[{I|L}P]KA 4.9493 + + 156 + 1 2.161 145454.8 1.0 2807 4215 7017 SUDHL4_400M_050219_1,7024 SUDHL4_400M_050219_1,7024,IAPPVPLKA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7025 37.102 800.0 139370.0 25 0 8243.9 -1 FLMDFMLRYMY 11 120 789.3467443582063 1576.6789357832124 2 789.3485595583916 MULTI CID FTMS 0 0 0 7017 107245.3359375 1.0 0 0.0 8 3 Oxidation (M) _FLM(Oxidation (M))DFM(Oxidation (M))LRYM(Oxidation (M))Y_ ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000198513|Q8WXF7-2|ATL1 5.731851221503515 0.8481046878870278 5 {[DA]|[EG]}{[ET]|[MV]}RYAQQDA{M(Oxidation (M))|F}Y 13 -1 + 65.668 0.0 0.0 4.1649 4.1649 76.716 0.0 0.0 0.0 4.525104808329516 16.324895889804317 4.525104808329516 1.6773532018394448 0 1.4419628234359578 1.0969100130080565 0.0 2.254432191740108 {[DA]|[EG]}{[ET]|[MV]}RYAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}Q[HA]H{M(Oxidation (M))|F}QQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}G[NS]KYAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GA[HA]H{M(Oxidation (M))|F}QQDA{M(Oxidation (M))|F}Y;[C(Carbamidomethyl (C))H]{M(Oxidation (M))|F}KYAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}A[HA]H{M(Oxidation (M))|F}QQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}{[ET]|[MV]}RYAQQW{M(Oxidation (M))|F}Y;{[QV]|[N{I|L}]|[RA]|[KV]}[YT]DEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}[NS]KYAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}Q[{M(Oxidation (M))|F}T]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QDA{M(Oxidation (M))|F}Y 4.1649;4.0585;3.9402;3.7788;3.7012;3.6945;3.4743;3.462;3.4558;3.4218 -;-;-;-;-;-;-;-;-;- 11577 1 2.161 79446.6 0.6000000238418579 2808 4215 7017 SUDHL4_400M_050219_1,7025 SUDHL4_400M_050219_1,7025,FLMDFMLRYMY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7026 37.114 666.0 172140.0 25 0 16476.0 + 40875 VLQQHLETL 9 149 540.8065606039585 1079.5985682747169 2 540.8071166872978 MULTI CID FTMS 0 0 0 7017 91805.5234375 0.6045851223508418 -1 0.0641860961914062 9 Unmodified _VLQQHLETL_ ENSG00000140382|ENST00000336216|HMG20A 110.6747026088012 0.0053351249510064 5 [H{I|L}]QQET{I|L}V{I|L} 9 5 + 67.616 0.0 0.0 6.2631 6.2631 84.856 0.0 0.0 0.0 3.2292658225092765 6.861465549972053 3.2292658225092765 3.2292658225092765 0 0.6989700043360187 0.8538719643217619 1.4559771852360797 1.95597718523608 [H{I|L}]QQET{I|L}V{I|L};[HQ]Q{I|L}ET{I|L}V{I|L};[H{I|L}]QQE{I|L}TV{I|L};{[QN]|[E{I|L}]|[KN]}HQQT{I|L}V{I|L};V{I|L}[H{I|L}]EQQT{I|L};[{I|L}V]QQH{I|L}ET{I|L};[HQ]Q{I|L}E{I|L}TV{I|L};[Q{I|L}]HQET{I|L}V{I|L};{[QN]|[E{I|L}]|[KN]}HQQ{I|L}TV{I|L};[HQ]{I|L}QET{I|L}V{I|L} 6.2631;5.9639;5.904;5.8565;5.6275;5.6107;5.6048;5.5619;5.4974;5.4808 -;-;-;-;-;+;-;-;-;- + 5247 1 2.161 98012.1 1.0 2809 4215 7017 SUDHL4_400M_050219_1,7026 SUDHL4_400M_050219_1,7026,VLQQHLETL True True VLQQHLETL 37.113824 540.807116687298 916885.4375 7017.0 ENSG00000140382|ENST00000336216|HMG20A 6.918013254801433 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7027 37.128 800.0 256240.0 25 0 29289.0 + 1420 ALDNDNYNL 9 202 526.2377921271046 1050.4610313210092 2 526.2390624880791 MULTI CID FTMS 0 0 0 7017 87348.453125 0.1185203294034758 -3 0.10223388671875 10 Unmodified _ALDNDNYNL_ ENSG00000162688|ENST00000361915|AGL;nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL 65.23502041540118 0.0231836506122253 5 [{I|L}A]DNDNYN{I|L} 9 0 + 57.651 0.0 0.0 5.4882 5.4882 79.03 0.0 0.0 0.0 0.2171842596633979 9.577570906191896 0.2171842596633979 0.2171842596633979 0 0.6237125054200234 1.6989700043360187 0.4698565171985375 1.1643943297944483 + + [{I|L}A]DNDNYN{I|L};[DN]D{I|L}ANYN{I|L};{NN|[MP]|[D{I|L}]|[EV]}ANDNYN{I|L};[DN]DNY{I|L}AN{I|L};[DN]DN[{I|L}A]YN{I|L};[DN]NDY{I|L}AN{I|L};[{I|L}A]DNDGGYN{I|L};[DN]D{I|L}AGGYN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[DN]ANYN{I|L};[{I|L}A]DGGDNYN{I|L} 5.4882;5.4675;5.2452;5.1705;4.7142;4.6558;4.6116;4.5909;4.4329;4.3835 +;-;-;-;-;-;-;-;-;- + 907 1 2.161 154292.0 0.5099999904632568 2810 4215 7017 SUDHL4_400M_050219_1,7027 SUDHL4_400M_050219_1,7027,ALDNDNYNL True True ALDNDNYNL 37.127655 526.239062488079 3877451.0 7017.0 nc|ENSG00000162688|P35573-2|AGL;;ENSG00000162688|ENST00000361915|AGL;;nc|ENSG00000162688|P35573-3|AGL 5.85231892267863 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7028 37.131 68.0 696640.0 25 0 57227.0 + 11616 GLADPSALTQA 11 86 522.2722312328118 1042.5299095324235 2 522.2720825076103 MULTI CID FTMS 0 0 0 7017 235755.046875 0.3132988138920298 -2 0.0903396606445312 11 Unmodified _GLADPSALTQA_ ENSG00000124535|ENST00000380773|WRNIP1;nc|ENSG00000124535|Q96S55-2|WRNIP1;nc|ENSG00000124535|Q96S55-3|WRNIP1;nc|ENSG00000124535|Q96S55-4|WRNIP1 36.506200033944 0.2662161991516171 5 {[VA]|[{I|L}G]}AD{I|L} 5 6 32.452 0.0 0.0 3.1128 0.0 0.0 0.0 570.2546769486922 570.2546769486922 18.102610702858577 0.0 0.0 0.0 0 0.5 2.0 0.3807196863200844 0.0 {[VA]|[{I|L}G]}AD{I|L} 3.1128 - 236 1 2.161 42026.1 1.0 2811 4215 7017 SUDHL4_400M_050219_1,7028 SUDHL4_400M_050219_1,7028,GLADPSALTQA False True GLADPSALTQA 37.130759 522.27208250761 9287390.0 7017.0 ENSG00000124535|ENST00000380773|WRNIP1;;nc|ENSG00000124535|Q96S55-3|WRNIP1;;nc|ENSG00000124535|Q96S55-2|WRNIP1;;nc|ENSG00000124535|Q96S55-4|WRNIP1 6.2757487297058105 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7030 37.136 76.0 1074500.0 25 0 429130.0 -1 0 76 398.22993408556624 794.4453152379325 2 398.2300598025322 MULTI CID FTMS 0 0 0 7029 731631.0 0.926035920026466 -2 0.1525955200195312 1 5 {I|L} 1 -1 9.0344 0.0 0.0 1.1372 0.0 0.0 663.3502052299232 0.0 663.3502052299232 0.0 3.5498269431874085 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1372 - 3 + 1 2.161 69932.7 1.0 2812 4216 7029 SUDHL4_400M_050219_1,7030 SUDHL4_400M_050219_1,7030, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7031 37.14 208.0 215700.0 25 0 17505.0 + 31066 RLIQESPTL 9 91 528.8060277516115 1055.597502570023 2 528.8064453005791 MULTI CID FTMS 0 0 0 7029 232831.09375 0.3152410559503534 3 -0.1722679138183593 2 Unmodified _RLIQESPTL_ ENSG00000111684|ENST00000261407|LPCAT3;ENST00000535479.5_1_12:7086310-7087113:-|nuORF;nc|ENSG00000111684|Q6P1A2-2|LPCAT3 51.629811660486645 0.0367964933207742 5 [TP]RSVVSPT{I|L} 10 6 + 61.387 0.0 0.0 5.8154 5.8154 90.461 0.0 0.0 0.0 9.542425094393252 16.235899786366232 9.542425094393252 9.542425094393252 0 1.6237125054200234 1.3010299956639813 0.4247425010840047 0.4247425010840047 [TP]RSVVSPT{I|L};[R{I|L}]{I|L}QESPT{I|L};[TP]{I|L}[KA]E{[RE]|[WV]}{I|L};[R{I|L}]{I|L}QTDPT{I|L};[R{I|L}]{I|L}[AG]ESPT{I|L};[TP]RSVVG{NN|[MP]|[D{I|L}]|[EV]}{I|L};[TP]{I|L}[KA]W{NN|[MP]|[D{I|L}]|[EV]}{I|L};[R{I|L}]{I|L}[AG]TDPT{I|L};[R{I|L}]{I|L}QEG{NN|[MP]|[D{I|L}]|[EV]}{I|L};[R{I|L}]{I|L}QTS[EP]{I|L} 5.8154;4.9114;4.4685;4.2239;4.0391;4.0174;3.404;3.3516;3.1135;2.9442 -;+;-;-;-;-;-;-;-;- + 470 1 2.161 46719.2 1.0 2813 4216 7029 SUDHL4_400M_050219_1,7031 SUDHL4_400M_050219_1,7031,RLIQESPTL True True RLIQESPTL 37.140336 528.806445300579 7750622.0 7029.0 nc|ENSG00000111684|Q6P1A2-2|LPCAT3;;ENSG00000111684|ENST00000261407|LPCAT3;;ENST00000535479.5_1_12:7086310-7087113:-|nuORF 6.524097124735515 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7032 37.142 23.0 3770700.0 25 0 300590.0 + 38203 TPRHIIVRF 9 105 380.23280476308383 1137.6765848894515 3 380.2328674197197 MULTI CID FTMS 0 0 0 7029 2214576.0 0.2429028088670028 -3 0.1787490844726562 3 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 34.221707139014875 0.1071766711162635 5 T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}[RV] 9 2 + 49.415 0.0 0.0 4.3435 4.3435 76.725 0.0 0.0 0.0 13.46787486224656 1.2050654486819212 1.2050654486819212 1.2050654486819212 0 1.2302046884880935 0.0 0.0 0.0 T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}[RV];T[RP]H{I|L}{I|L}V[R{M(Oxidation (M))|F}];T[RP]H{I|L}{M(Oxidation (M))|F}{I|L}[RV];T[RP]H{M(Oxidation (M))|F}{I|L}{I|L}[RV] 4.3435;4.2376;4.0789;3.2151 -;+;-;- + 198 + 1 2.161 73309.1 1.0 2814 4216 7029 SUDHL4_400M_050219_1,7032 SUDHL4_400M_050219_1,7032,TPRHIIVRF True True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 7033 37.144 95.0 589890.0 25 0 89276.0 + 42199 VSEPLAPL 8 89 413.2390174549228 824.4634819766457 2 413.2384826540947 MULTI CID FTMS 0 0 0 7029 492146.0625 0.734246909749121 -8 0.3367233276367187 4 Unmodified _VSEPLAPL_ REV__ENSG00000158828|ENST00000321556|PINK1;REV__ENST00000400490.2_1_1:20972014-20977181:+|nuORF;REV__ENST00000492302.1_1_1:20975445-20977181:+|nuORF;REV__nc|ENSG00000158828|Q9BXM7-2|PINK1 2.577480529830294 0.808687252328423 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.161 48382.8 1.0 2815 4216 7029 SUDHL4_400M_050219_1,7033 SUDHL4_400M_050219_1,7033,VSEPLAPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7034 37.146 120.0 914380.0 25 0 166400.0 + 38205 TPRHIIVRF 9 74 569.845917728665 1137.67728252413 2 569.8459960818291 MULTI CID FTMS 0 0 0 7029 481464.1875 0.2478117980314867 -3 0.1787490844726562 5 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 46.0223103267499 0.0490911897871712 5 TPRH{I|L} 5 4 41.599 0.0 0.0 3.6565 0.0 0.0 0.0 530.3119600885374 530.3119600885374 29.38039076304328 0.0 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.7302046884880937 + TPRH{I|L} 3.6565 + + 46 + 1 2.161 91237.8 1.0 2816 4216 7029 SUDHL4_400M_050219_1,7034 SUDHL4_400M_050219_1,7034,TPRHIIVRF True True TPRHIIVRF 37.146069 569.845996081829 141213826.0 7029.0 nc|ENSG1000|Q9UN81|L1_ORF1 6.205528577168782 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 7035 37.148 81.0 925580.0 25 0 166950.0 + 9389 FISEFEHRV 9 79 388.532926732982 1162.576950799146 3 388.5328246951103 MULTI CID FTMS 0 0 0 7029 427050.125 0.8678634799628611 -1 0.088409423828125 6 Unmodified _FISEFEHRV_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF 26.268140514670165 0.1969607489560049 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EH[RV] 9 0 + 41.717 0.0 0.0 3.5883 3.5883 74.837 0.0 0.0 0.0 7.147642715192504 1.249387366082999 1.249387366082999 1.249387366082999 0 0.0 0.0 0.5 0.2614393726401688 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EH[RV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EV[RH];[RH][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}ES{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}[YK]{[ET]|[MV]};{[MG]|[TS]}[KA]{[CP]|[EA]}VES{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SEV[QA]{[WS]|[C(Carbamidomethyl (C)){I|L}]}P 3.5883;3.4809;2.0095;2.0095;1.4205;1.1358 +;-;-;-;-;- + 121 + 1 2.161 63308.8 1.0 2817 4216 7029 SUDHL4_400M_050219_1,7035 SUDHL4_400M_050219_1,7035,FISEFEHRV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7036 37.156 451.0 223670.0 25 0 18595.0 -1 0 90 881.9123726664106 1761.8101923996212 2 881.9134399294853 MULTI CID FTMS 0 0 0 7029 220789.046875 1.0 0 0.0 7 5 [NP]{I|L}NR[HM]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 89.715 0.0 0.0 5.0922 5.0922 85.357 0.0 0.0 0.0 14.122758320274656 67.94917177197476 14.122758320274656 8.061799739838875 0 1.424742501084005 1.0 0.4247425010840047 1.5356668758921828 [NP]{I|L}NR[HM]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{[CA]|SS}[H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGR[HM]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NR[HM]AEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NR[HM]AEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[KT]{[YC]|[HE]}EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}[C(Carbamidomethyl (C))Q][H{I|L}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NR[HM]AEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[H{I|L}][RH][WD];[NP]{I|L}NR[HM][MT]{M(Oxidation (M))|F}{I|L}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 5.0922;4.6346;4.5796;4.5796;4.5796;4.2513;4.0127;3.599;3.2913;2.1397 -;-;-;-;-;-;-;-;-;- 473 1 2.161 72448.7 1.0 2818 4216 7029 SUDHL4_400M_050219_1,7036 SUDHL4_400M_050219_1,7036, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7037 37.159 139.0 509760.0 25 0 52419.0 + 9045 FEGSFEEL 8 92 479.21419182662254 956.4138307200452 2 479.2151367068291 MULTI CID FTMS 0 0 0 7029 185965.109375 0.629319491488052 5 -0.2175178527832031 8 Unmodified _FEGSFEEL_ ENSG00000151726|ENST00000281455|ACSL1;ENST00000513001.5_1_4:185678281-185679089:-|nuORF;nc|ENSG00000151726|P33121-2|ACSL1;nc|ENSG00000151726|P33121-3|ACSL1 6.723162845929126 0.7835230281555235 5 {I|L} 1 7 12.474 0.0 0.0 1.3043 0.0 0.0 825.318766488403 0.0 825.318766488403 0.0 6.532125137753438 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3043 + + 79 + 1 2.161 57824.8 1.0 2819 4216 7029 SUDHL4_400M_050219_1,7037 SUDHL4_400M_050219_1,7037,FEGSFEEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7038 37.165 318.0 195670.0 25 0 29584.0 41593 VPPKVTTT 8 111 421.7508639121425 841.487174891085 2 421.7515441775322 MULTI CID FTMS 0 0 0 7029 150045.5625 0.526550310257803 -12 0.5820236206054688 9 Unmodified _VPPKVTTT_ ENSG00000113249|ENST00000523175|HAVCR1 2.577480529830294 0.808687252328423 5 Y 1 8 11.42 0.0 0.0 1.3571 0.0 0.0 660.4132135647163 0.0 660.4132135647163 0.0 9.82618946870394 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3571 - 8 + 1 2.161 55005.5 1.0 2820 4216 7029 SUDHL4_400M_050219_1,7038 SUDHL4_400M_050219_1,7038,VPPKVTTT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7039 37.178 800.0 124480.0 25 0 7883.7 + 31062 RLIGIYKTY 9 107 563.8347636057887 1125.6549742783773 2 563.8345214724541 MULTI CID FTMS 0 0 0 7029 130522.265625 0.2000448731009396 2 -0.1060600280761718 10 Unmodified _RLIGIYKTY_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 41.8396318013385 0.0653578398400075 5 [{I|L}A][RV]{I|L}YKTY 9 3 + 55.978 0.0 0.0 4.9729 4.9729 90.857 0.0 0.0 0.0 0.915149811213496 45.140588317947305 0.915149811213496 55.97804375441612 0 1.2059771852360797 0.6989700043360187 0.0 0.805462187404089 [{I|L}A][RV]{I|L}YKTY 4.9729 - 108 1 2.161 80841.5 0.6299999952316284 2821 4216 7029 SUDHL4_400M_050219_1,7039 SUDHL4_400M_050219_1,7039,RLIGIYKTY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7040 37.182 203.0 375790.0 25 0 40039.0 -1 0 102 374.1803603704763 373.1730839038763 1 374.1855956912041 MULTI CID FTMS 0 0 0 7029 139564.96875 1.0 0 0.0 11 5 R 1 -1 11.42 0.0 0.0 3.0602 0.0 0.0 199.06100612242943 0.0 199.06100612242943 0.0 0.5825278453571858 0.0 0.0 0 0.0 0.0 0.0 0.0 R 3.0602 - 3 + 1 2.161 63220.5 1.0 2822 4216 7029 SUDHL4_400M_050219_1,7040 SUDHL4_400M_050219_1,7040, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7041 37.187 264.0 208030.0 25 0 15015.0 + -1 IIIECQLSK 9 99 552.308574824903 1102.6025967166058 2 552.3088256716728 MULTI CID FTMS 0 0 0 7029 99100.328125 0.0919919705710213 4 -0.1999015808105468 12 Carbamidomethyl (C) _IIIEC(Carbamidomethyl (C))QLSK_ REV__ENST00000445089.5_2_3:184535210-184542358:+|nuORF 14.838274106304384 0.4350285940865338 5 PM{I|L} 3 -1 13.893 0.0 0.0 1.2601 0.0 0.0 743.4180665911302 0.0 743.4180665911302 0.0 1.0578473515576725 0.0 0.0 0 0.0 0.0 0.0 0.0 PM{I|L} 1.2601 - 131 + 1 2.161 47637.4 1.0 2823 4216 7029 SUDHL4_400M_050219_1,7041 SUDHL4_400M_050219_1,7041,IIIECQLSK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7042 37.193 307.0 228240.0 25 0 19389.0 39790 VERCIVSVA 9 107 488.2683587695914 974.5221646059828 2 488.2695495486259 MULTI CID FTMS 0 0 0 7029 152807.171875 0.5368606675024711 15 -0.5658035278320312 13 Unmodified _VERCIVSVA_ ENST00000541442.5_1_16:31505185-31519098:-|nuORF 11.640296217721598 0.521594087909532 5 [K{I|L}]D{I|L}SV[WD] 8 7 + 18.799 0.0 0.0 1.9291 1.9291 72.334 0.0 0.0 0.0 1.1559637113987795 5.700401342584311 1.1559637113987795 1.1559637113987795 0 0.0 0.0 0.3807196863200844 0.0 [K{I|L}]D{I|L}SV[WD];{[TV]|[{I|L}S]}[VG]{I|L}SV[WD];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}SV[WD];[VS]G{I|L}{I|L}SV[WD] 1.9291;1.8105;1.7909;1.0211 -;-;-;- 192 1 2.161 58932.0 1.0 2824 4216 7029 SUDHL4_400M_050219_1,7042 SUDHL4_400M_050219_1,7042,VERCIVSVA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7043 37.198 222.0 282500.0 25 0 16814.0 + -1 TAAHGLEL 8 117 406.2164779539369 405.20920148733694 1 406.2179748415947 MULTI CID FTMS 0 0 0 7029 101966.7890625 1.0 0 0.0 14 nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS;ENSG00000070669|ENST00000394308|ASNS 5 HH{I|L} 3 -1 HH + + 13.979 -0.34093 -0.12437 3.4499 3.4499 54.954 0.0 0.0 0.0 0.0 4.661258704181995 0.0 0.0 0 0.0 0.0 0.0 0.0 HH{I|L} 3.4499 - 16 + 1 2.161 55714.9 1.0 2825 4216 7029 SUDHL4_400M_050219_1,7043 SUDHL4_400M_050219_1,7043, False False TAAHGLEL 37.19806 406.217974841595 514943.40625 7029.0 nc|ENSG00000070669|P08243-2|ASNS;;nc|ENSG00000070669|P08243-3|ASNS;;ENSG00000070669|ENST00000394308|ASNS 2.303960899511973 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7044 37.202 199.0 221140.0 25 0 18900.0 + 13342 HLDVQPAAL 9 88 482.2664228064571 962.5182926797142 2 482.2673522830009 MULTI CID FTMS 0 0 0 7029 101143.9140625 1.0 0 0.0 15 Unmodified _HLDVQPAAL_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000582620.5_1_18:72167208-72179735:+|nuORF 15.847184025352805 0.4077185912009129 5 {I|L} 1 8 13.099 0.0 0.0 1.3609 0.0 0.0 831.4233352595955 0.0 831.4233352595955 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3609 + + 122 + 1 2.161 40557.4 1.0 2826 4216 7029 SUDHL4_400M_050219_1,7044 SUDHL4_400M_050219_1,7044,HLDVQPAAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7046 37.207 55.0 1024800.0 25 0 154810.0 + 31328 RMLDSVEKL 9 63 545.7996862775457 1089.5848196218913 2 545.8002197146416 MULTI CID FTMS 0 0 0 7045 735744.0 0.3910681849484561 1 -0.0349578857421875 1 Unmodified _RMLDSVEKL_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 28.49450938151212 0.1686335738423394 5 {I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VS 5 7 32.461 0.0 0.0 2.9792 0.0 0.0 0.0 512.2303661769786 512.2303661769786 14.189615513722202 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.3494850021680094 0.0 {I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VS 2.9792 - 32 + 1 2.161 48979.2 1.0 2827 4217 7045 SUDHL4_400M_050219_1,7046 SUDHL4_400M_050219_1,7046,RMLDSVEKL False True RMLDSVEKL 37.20665 545.800219714642 10978359.0 7045.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 6.366813977559407 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7047 37.21 166.0 494920.0 25 0 31514.0 -1 0 78 865.898928520826 1729.7833041084518 2 865.8997070193291 MULTI CID FTMS 0 0 0 7045 312919.8125 0.5334966839713918 -3 0.2236976623535156 2 5 [NP]{I|L}NADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 79.071 0.0 0.0 4.5712 4.5712 80.905 0.0 0.0 0.0 3.979400086720375 4.648867983026506 3.979400086720375 3.979400086720375 0 1.305462187404089 0.0 0.0 0.8494850021680094 [NP]{I|L}NADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PGGADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{[WT]|[RM]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{[WT]|[RM]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.5712;4.3411;4.0501;4.0501;4.0501;3.82;3.82;3.82;3.6214;3.3913 -;-;-;-;-;-;-;-;-;- 410 1 2.161 61129.2 1.0 2828 4217 7045 SUDHL4_400M_050219_1,7047 SUDHL4_400M_050219_1,7047, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7048 37.214 198.0 256940.0 25 0 25675.0 + 15002 ILSEVQQAV 9 94 493.7794736965542 985.5443944599084 2 493.7799255251884 MULTI CID FTMS 0 0 0 7045 192002.0625 0.1530756209362148 -5 0.2617454528808594 3 Unmodified _ILSEVQQAV_ ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226555150-226558263:-|nuORF 32.30548876998284 0.1201446275138228 5 {I|L}{I|L}{[ES]|[DT]|[{I|L}C]}VQQAV 9 0 + 39.319 0.0 0.0 3.9896 3.9896 79.69 0.0 0.0 0.0 4.45931800153943 8.824995917031949 4.45931800153943 4.45931800153943 0 0.6989700043360187 2.0 0.4247425010840047 0.0 + + {I|L}{I|L}{[ES]|[DT]|[{I|L}C]}VQQAV;{[TV]|[{I|L}S]}D{I|L}{I|L}QQAV;{[ES]|[DT]|[{I|L}C]}V{I|L}{I|L}QQAV;{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}VQ[AG]AV;{I|L}{I|L}{[ES]|[DT]|[{I|L}C]}V[AG]QAV;{[TV]|[{I|L}S]}D{I|L}{I|L}Q[AG]AV;{[TV]|[{I|L}S]}D{I|L}{I|L}[AG]QAV;{[ES]|[DT]|[{I|L}C]}V{I|L}{I|L}Q[AG]AV;{[ES]|[DT]|[{I|L}C]}V{I|L}{I|L}[AG]QAV;{[TV]|[{I|L}S]}DQ{I|L}{I|L}QAV 3.9896;3.5371;3.3335;3.0553;3.0553;2.6028;2.6028;2.3992;2.3992;1.7613 +;-;-;-;-;-;-;-;-;- + 834 1 2.161 44599.9 1.0 2829 4217 7045 SUDHL4_400M_050219_1,7048 SUDHL4_400M_050219_1,7048,ILSEVQQAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7049 37.217 161.0 387110.0 25 0 26464.0 2055 APLPPHLPGA 10 94 485.2792959137977 968.5440388943954 2 485.2798644900322 MULTI CID FTMS 0 0 0 7045 186729.703125 0.6508461156732415 26 -1.220050811767578 4 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 12.531546534597751 0.6372748319968624 5 [PA]{I|L} 3 7 29.437 0.0 0.0 3.0393 0.0 0.0 0.0 684.3467482051954 684.3467482051954 18.723637474483468 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + [PA]{I|L} 3.0393 + + 180 1 2.161 53746.4 1.0 2830 4217 7045 SUDHL4_400M_050219_1,7049 SUDHL4_400M_050219_1,7049,APLPPHLPGA False True GMLPDPKNV 37.216879 485.279864490032 7932492.0 7045.0 ENSG00000151729|ENST00000281456|SLC25A4;;ENST00000491736.1_1_4:186066902-186068122:+|nuORF 1.0265030066172285 2.0 False 9.0 False ERV PXD020620_cell_line SUDHL4_400M_050219_1 7050 37.223 340.0 276460.0 25 0 62990.0 + 37500 TLGHLALTA 9 121 448.7625339122144 0 448.7636901736259 PEAK CID FTMS 0 0 0 7045 138544.234375 0.595266470572518 -2 0.1595115661621093 5 Unmodified _TLGHLALTA_ REV__ENSG00000130202|ENST00000252483|NECTIN2;REV__nc|ENSG00000130202|Q92692-2|NECTIN2 32.30548876998284 0.0995446103270859 5 {I|L}A{I|L}{I|L} 4 -1 24.24 0.0 0.0 2.7069 0.0 0.0 190.09463461954743 292.10578333072505 482.2004179502725 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}A{I|L}{I|L} 2.7069 - 91 + 1 2.161 78464.6 1.0 2831 4217 7045 SUDHL4_400M_050219_1,7050 SUDHL4_400M_050219_1,7050,TLGHLALTA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7051 37.237 800.0 149390.0 25 0 12764.0 -1 MLKEDDMFKDF 11 112 725.81534723831 1449.61614154342 2 725.8160278201103 MULTI CID FTMS 0 0 0 7045 92140.8515625 0.6095335379577628 -1 0.0711021423339843 6 2 Oxidation (M) _M(Oxidation (M))LKEDDM(Oxidation (M))FKDF_ ENSG00000110841|ENST00000228425|PPFIBP1;nc|ENSG00000110841|Q86W92-3|PPFIBP1;nc|ENSG00000110841|Q86W92-4|PPFIBP1;nc|ENSG00000110841|Q86W92|PPFIBP1 15.248480904072842 0.7179608125786238 5 [HD]EAQQDA{M(Oxidation (M))|F}YQV 12 -1 + 74.568 0.0 0.0 5.144 5.144 86.33 0.0 0.0 0.0 3.556518697048716 57.14430978085917 3.556518697048716 9.098233696509126 0 0.8226825097560422 0.0 1.0044321917401078 0.8494850021680094 [HD]EAQQDA{M(Oxidation (M))|F}YQV;[HD]EAQ[AG]DA{M(Oxidation (M))|F}YQV;[HD]EA[AG]QDA{M(Oxidation (M))|F}YQV;[HD]EAQQW{M(Oxidation (M))|F}YQV;[YQ]{[QC]|[C(Carbamidomethyl (C))A]}WDA{M(Oxidation (M))|F}YQV;{NN|[MP]|[D{I|L}]|[EV]}Y[WM]DA{M(Oxidation (M))|F}YQV;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQDA{M(Oxidation (M))|F}YQV;[{M(Oxidation (M))|F}V]CCQQDA{M(Oxidation (M))|F}YQV;[HD]EA[AG]QW{M(Oxidation (M))|F}YQV;[HD]EAQ[AG]W{M(Oxidation (M))|F}YQV 5.144;4.5163;4.5163;4.4987;4.4807;4.2642;3.8817;3.8817;3.869;3.869 -;-;-;-;-;-;-;-;-;- 1029 1 2.161 89954.9 0.5899999737739563 2832 4217 7045 SUDHL4_400M_050219_1,7051 SUDHL4_400M_050219_1,7051,MLKEDDMFKDF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7053 37.245 324.0 243280.0 25 0 21086.0 21428 LPGYLAPLPA 10 107 506.2954853892952 1010.5764178453904 2 506.2954894900322 MULTI CID FTMS 0 0 0 7052 108392.015625 0.1201652928007968 45 -2.0850791931152344 1 Unmodified _LPGYLAPLPA_ ENSG00000187634|ENST00000616016|SAMD11 12.531546534597751 0.6372748319968624 5 [VS]{I|L}P 4 8 38.188 0.0 0.0 3.7788 0.0 0.0 0.0 611.3184298150999 611.3184298150999 24.20818753952375 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [VS]{I|L}P 3.7788 - 142 + 1 2.161 67585.9 1.0 2833 4218 7052 SUDHL4_400M_050219_1,7053 SUDHL4_400M_050219_1,7053,LPGYLAPLPA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7054 37.25 269.0 291900.0 25 0 17488.0 + 34197 SLNSNVYDV 9 115 505.74327980125526 1009.4720066693104 2 505.7439758181572 MULTI CID FTMS 0 0 0 7052 157099.390625 0.4296195691652416 -2 0.1060600280761718 2 Unmodified _SLNSNVYDV_ ENSG00000175073|ENST00000310421|VCPIP1 41.8396318013385 0.0653578398400075 5 [VS]NNTV 6 5 37.75 0.0 0.0 3.7396 0.0 0.0 0.0 392.1553922496418 392.1553922496418 14.07264622110987 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.4896518287104437 0.2614393726401688 [VS]NNTV 3.7396 - 475 1 2.161 67369.1 1.0 2834 4218 7052 SUDHL4_400M_050219_1,7054 SUDHL4_400M_050219_1,7054,SLNSNVYDV True True SLNSNVYDV 37.25021 505.743975818157 2664222.5 7052.0 ENSG00000175073|ENST00000310421|VCPIP1 3.5478362242380777 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7055 37.264 800.0 108020.0 25 0 12602.0 + 17394 KMLEIDPQKV 10 116 600.8362398689629 1199.6579268047258 2 600.8368408083916 MULTI CID FTMS 0 0 0 7052 96117.546875 1.0 0 0.0 3 Unmodified _KMLEIDPQKV_ ENSG00000075239|ENST00000265838|ACAT1;ENST00000533597.1_1_11:108016907-108018114:+|nuORF 74.7717668357584 0.0187829169580365 5 KM{I|L}E{I|L}D[QP]VK 10 2 + 74.276 0.0 0.0 6.1914 6.1914 84.812 0.0 0.0 0.0 15.671681560617913 3.290587192642249 3.290587192642249 3.290587192642249 0 3.0356668758921828 0.0 0.0 0.5994850021680094 KM{I|L}E{I|L}D[QP]VK;KM{I|L}E{I|L}D[QP]KV;KM{I|L}E{I|L}DKN[{I|L}P];KM{I|L}E{I|L}DKQPV;KM{I|L}E{I|L}DK[VP]Q;KM{I|L}H[YG][QP]VK;KM{I|L}E{I|L}DKGG[{I|L}P];KM{I|L}H[YG][QP]KV;KVDKEV{[WT]|[RM]}PV;KM{I|L}E{I|L}DK[AG]PV 6.1914;5.9171;5.0692;4.8756;4.6714;4.544;4.3052;4.2697;4.1199;4.1117 -;+;-;-;-;-;-;-;-;- + 1551 + 1 2.161 66787.1 0.5699999928474426 2835 4218 7052 SUDHL4_400M_050219_1,7055 SUDHL4_400M_050219_1,7055,KMLEIDPQKV True True KMLEIDPQKV 37.264041 600.836840808392 637806.9375 7052.0 ENSG00000075239|ENST00000265838|ACAT1;;ENST00000533597.1_1_11:108016907-108018114:+|nuORF 8.148306051890055 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7056 37.275 649.0 219610.0 25 0 10476.0 + 29804 QQFRNAPPF 9 163 552.7824648959916 1103.550376858783 2 552.7837402224541 MULTI CID FTMS 0 0 0 7052 93907.8828125 1.0 0 0.0 4 Unmodified _QQFRNAPPF_ ENSG00000126768|ENST00000696123|TIMM17B;ENST00000466995.5_1_X:48751014-48751375:-|nuORF;ENST00000472645.1_1_X:48751014-48754386:-|nuORF;nc|ENSG00000126768|O60830-2|TIMM17B 36.04419817259434 0.0971720506436186 5 [YV]PA[WQ]PP{M(Oxidation (M))|F} 9 6 + 30.479 0.0 0.0 2.7619 2.7619 74.613 0.0 0.0 0.0 2.1542432545842978 5.969100130080562 2.1542432545842978 2.1542432545842978 0 0.2396518287104437 0.0 0.0 1.0 [YV]PA[WQ]PP{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VA[WQ]PP{M(Oxidation (M))|F};[YV]P[NP]{[VA]|[{I|L}G]}TP{M(Oxidation (M))|F};[YV]P[WQ]APP{M(Oxidation (M))|F};[{I|L}A][KS][C(Carbamidomethyl (C))N]APP{M(Oxidation (M))|F};[YV]PA[WQ]P{M(Oxidation (M))|F}P;[YV]PA[WQ]PM{I|L};[YV]T{[VA]|[{I|L}G]}[NP]PP{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[NP]{[VA]|[{I|L}G]}TP{M(Oxidation (M))|F};[YV]P[WQ]AV{[QN]|[E{I|L}]|[KN]} 2.7619;2.5667;2.5051;2.221;2.2047;2.0355;1.9778;1.9642;1.925;1.8455 -;-;-;-;-;-;-;-;-;- 825 + 1 2.161 113005.9 1.0 2836 4218 7052 SUDHL4_400M_050219_1,7056 SUDHL4_400M_050219_1,7056,QQFRNAPPF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7057 37.289 800.0 150770.0 25 0 27097.0 -1 0 127 648.3806349611368 647.3733584945368 1 648.3796874880791 MULTI CID FTMS 0 0 0 7052 175135.796875 0.4200167696571131 -4 0.2586555480957031 5 5 C(Carbamidomethyl (C)) 1 -1 0.9691 0.0 0.0 0.1497 0.0 0.0 61.05299166051595 423.27256189517817 484.3255535556941 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.1497 - 14 + 1 2.161 106506.0 0.75 2837 4218 7052 SUDHL4_400M_050219_1,7057 SUDHL4_400M_050219_1,7057, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7058 37.303 800.0 98866.0 25 0 11310.0 + -1 VGGPCGVL 8 80 758.3852297447056 757.3779532781056 1 758.3849975466728 MULTI CID FTMS 0 0 0 7052 146897.296875 0.7801083157047317 2 -0.093841552734375 6 Carbamidomethyl (C) _VGGPC(Carbamidomethyl (C))GVL_ REV__ENST00000527424.5_1_8:42742976-42751768:-|nuORF 11.114462752807354 0.7467182956244686 5 VE{M(Oxidation (M))|F}HQV 6 -1 + 49.589 0.0 0.0 6.5474 6.5474 88.12 0.0 0.0 0.0 5.969100130080562 13.641303353600094 5.969100130080562 5.969100130080562 0 1.298455006504028 0.0 0.5 0.6989700043360187 VE{M(Oxidation (M))|F}HQV;D{I|L}{M(Oxidation (M))|F}HQV;D{M(Oxidation (M))|F}{I|L}HQV;{[{M(Oxidation (M))|F}D]|MM}{I|L}HQV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}HQV;{[{M(Oxidation (M))|F}D]|MM}{I|L}H[AG]V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}H[AG]V;VE[PG]{I|L}{M(Oxidation (M))|F}P;[HQ]{I|L}{[{M(Oxidation (M))|F}D]|MM}V;[H{I|L}]Q{[{M(Oxidation (M))|F}D]|MM}V 6.5474;5.7593;4.8422;4.7463;4.2832;3.5025;3.0394;2.9029;2.668;2.464 -;-;-;-;-;-;-;-;-;- 227 + 1 2.161 63357.3 0.6800000071525574 2838 4218 7052 SUDHL4_400M_050219_1,7058 SUDHL4_400M_050219_1,7058,VGGPCGVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7060 37.311 214.0 243590.0 25 0 33236.0 + 4470 DAYALNHTL 9 92 509.2527102958541 1016.4908676585084 2 509.2538024783134 MULTI CID FTMS 0 0 0 7059 150271.234375 0.7360238745385195 1 -0.0276336669921875 1 Unmodified _DAYALNHTL_ ENSG00000110777|ENST00000393067|POU2AF1 41.8396318013385 0.0653578398400075 5 {[DA]|[EG]}Y 3 6 29.437 0.0 0.0 2.8959 0.0 0.0 0.0 664.340146793527 664.340146793527 5.268963983726742 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}Y 2.8959 + + 203 1 2.16 47092.1 1.0 2839 4219 7059 SUDHL4_400M_050219_1,7060 SUDHL4_400M_050219_1,7060,DAYALNHTL True True DAYALNHTL 37.310947 509.253802478313 1124179.0 7059.0 ENSG00000110777|ENST00000393067|POU2AF1 7.00651756922404 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7061 37.318 380.0 139160.0 25 0 11116.0 + 9390 FISEFEHRV 9 84 582.2951943816598 1162.5758358301196 2 582.2950927615166 MULTI CID FTMS 0 0 0 7059 66427.5234375 0.2281879019919952 3 -0.077362060546875 2 Unmodified _FISEFEHRV_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF 31.26834338654808 0.1333407332142048 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EH[RV] 9 0 + 43.835 0.0 0.0 3.7705 3.7705 85.507 0.0 0.0 0.0 28.350162448297667 8.384767769392738 8.384767769392738 13.979400086720371 0 0.8494850021680094 0.0 0.0 0.4247425010840047 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EH[RV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SMHHH[RV] 3.7705;2.568 +;- + 54 + 1 2.16 48368.0 1.0 2840 4219 7059 SUDHL4_400M_050219_1,7061 SUDHL4_400M_050219_1,7061,FISEFEHRV False True FISEFEHRV 37.317774 582.295092761517 4476430.0 7059.0 ENST00000527047.5_1_11:237024-247462:+|nuORF;;ENSG00000185627|ENST00000532097|PSMD13 7.655351479848226 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7062 37.326 436.0 187640.0 25 0 17387.0 + + 3542 RIFGTDSQYNAY 12 96 717.8358914991303 1433.6572300650605 2 717.8369628787041 MULTI CID FTMS 0 0 0 7059 142438.09375 0.6992111970275517 -1 0.0662078857421875 3 Unmodified _CWQVFYQRAAY_ ENSG00000052802|ENST00000261507|MSMO1;nc|ENSG00000052802|Q15800-2|MSMO1 9.38312468134398 0.8308777417566128 5 [R{I|L}]{M(Oxidation (M))|F}GTDSQYNAY 12 -1 + 102.53 0.0 0.0 7.1519 7.1519 90.707 0.0 0.0 0.0 7.95880017344075 16.611814434466183 7.95880017344075 7.95880017344075 0 1.1549471895720984 1.3010299956639813 0.7614393726401688 0.3807196863200844 [R{I|L}]{M(Oxidation (M))|F}GTDSQYNAY;{[QG]|[NA]}Y{I|L}{I|L}DSQYNAY;[R{I|L}]{M(Oxidation (M))|F}GTDSQYGGAY;[R{I|L}]{M(Oxidation (M))|F}GTDS[AG]YNAY;{[QG]|[NA]}Y{I|L}{I|L}DSQYGGAY;{[QG]|[NA]}Y{I|L}{I|L}DS[AG]YNAY;[YN]A{I|L}{I|L}DSQYNAY;[R{I|L}]{M(Oxidation (M))|F}GTDS[AG]YGGAY;[YQ]G{I|L}{I|L}DSQYNAY;[YN]A{I|L}{I|L}DS[AG]YNAY 7.1519;6.5968;6.5173;6.5173;5.9621;5.9621;5.8993;5.8845;5.2693;5.2646 -;-;-;-;-;-;-;-;-;- 874 1 2.16 64649.7 1.0 2841 4219 7059 SUDHL4_400M_050219_1,7062 SUDHL4_400M_050219_1,7062,CWQVFYQRAAY False False RIFGTDSQYNAY 37.325556 717.836962878704 1360810.125 7059.0 ENSG00000052802|ENST00000261507|MSMO1;;nc|ENSG00000052802|Q15800-2|MSMO1 9.15757687886556 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7063 37.331 277.0 220490.0 25 0 12348.0 + 30801 RIFSGGDQSF 10 109 557.269246944155 1112.52394095511 2 557.2687255740166 MULTI CID FTMS 0 0 0 7059 108303.53125 0.64550425675093 -2 0.101165771484375 4 Unmodified _RIFSGGDQSF_ ENSG00000148634|ENST00000373700|HERC4;ENST00000427635.6_1_10:69747892-69752485:-|nuORF;nc|ENSG00000148634|Q5GLZ8-3|HERC4;nc|ENSG00000148634|Q5GLZ8-6|HERC4;nc|ENSG00000148634|Q5GLZ8|HERC4 29.43715596616401 0.3072975788498757 5 [R{I|L}]{M(Oxidation (M))|F}SGGDQS{M(Oxidation (M))|F} 10 0 + 65.654 0.0 0.0 5.9014 5.9014 80.504 0.0 0.0 0.0 7.544873321858489 15.484550065040274 7.544873321858489 0.5115252244738144 0 1.0 0.744727494896694 0.3494850021680094 0.0 + + [R{I|L}]{M(Oxidation (M))|F}SGGDQS{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}SNDQS{M(Oxidation (M))|F};[Y{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}GGDQS{M(Oxidation (M))|F};[Y{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}NDQS{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}SGGD[AG]S{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}SND[AG]S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}]GGDQS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}]NDQS{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}SGGDQAY;[R{I|L}]{M(Oxidation (M))|F}SNDQAY 5.9014;5.8554;5.2232;5.1772;5.0776;5.0277;4.9154;4.8694;4.5095;4.4635 +;-;-;-;-;-;-;-;-;- + 485 1 2.16 55636.2 1.0 2842 4219 7059 SUDHL4_400M_050219_1,7063 SUDHL4_400M_050219_1,7063,RIFSGGDQSF False True RIFSGGDQSF 37.330664 557.268725574017 798598.4375 7059.0 ENSG00000148634|ENST00000373700|HERC4;;nc|ENSG00000148634|Q5GLZ8-3|HERC4;;nc|ENSG00000148634|Q5GLZ8|HERC4;;ENST00000427635.6_1_10:69747892-69752485:-|nuORF;;nc|ENSG00000148634|Q5GLZ8-6|HERC4 6.523786862691243 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7065 37.335 99.0 784570.0 25 0 94570.0 + 14086 IAPPVPLKA 9 71 453.2945198219893 904.5744867107786 2 453.2946960330009 MULTI CID FTMS 0 0 0 7064 692030.375 1.0 0 0.0 1 Unmodified _IAPPVPLKA_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 34.10243960390752 0.1078313939113124 5 [{I|L}A]PPV[{I|L}P]KA 9 0 + 51.011 0.0 0.0 5.6392 5.6392 92.819 0.0 0.0 0.0 23.54421828202865 10.565304067530576 10.565304067530576 51.01061666125456 0 0.4247425010840047 1.6989700043360187 0.0 0.6462566630072955 + + [{I|L}A]PPV[{I|L}P]KA 5.6392 + + 89 + 1 2.16 65407.4 1.0 2843 4220 7064 SUDHL4_400M_050219_1,7065 SUDHL4_400M_050219_1,7065,IAPPVPLKA True True IAPPVPLKA 37.335449 453.294696033001 18042028.5 7064.0 ENST00000465029.5_1_2:111419157-111435602:-|nuORF;;nc|ENSG00000169679|O43683-2|BUB1;;ENSG00000169679|ENST00000302759|BUB1;;nc|ENSG00000169679|O43683-3|BUB1 5.545140107472737 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7066 37.34 248.0 293600.0 25 0 37276.0 33781 SLAVVLMH 8 110 435.2509640550933 868.4873751769866 2 435.2510864138603 MULTI CID FTMS 0 0 0 7064 218366.046875 0.7480398742582053 9 -0.2639999389648437 2 Unmodified _SLAVVLMH_ ENSG00000178814|ENST00000618853|OPLAH 2.577480529830294 0.808687252328423 5 R 1 8 0.3786 0.0 0.0 0.043593 0.0 0.0 452.2587830302885 257.1035250299438 709.3623080602322 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.043593 - 4 + 1 2.16 64440.9 1.0 2844 4220 7064 SUDHL4_400M_050219_1,7066 SUDHL4_400M_050219_1,7066,SLAVVLMH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7067 37.345 250.0 358770.0 25 0 35580.0 + 1872 ALVQDLAKA 9 123 464.7764645688513 927.5383762045026 2 464.7767822146416 MULTI CID FTMS 0 0 0 7064 201013.359375 0.3132212508831892 -4 0.1999015808105468 3 Unmodified _ALVQDLAKA_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 71.92227651296345 0.0203558744033348 5 [{I|L}A]VQD{I|L}AKA 9 0 + 67.25 0.0 0.0 7.2503 7.2503 93.55 0.0 0.0 0.0 38.6416623339984 11.5402006102098 11.5402006102098 9.208187539523756 0 1.0387254899964358 2.0 0.6382104921644451 1.1989700043360187 + + [{I|L}A]VQD{I|L}AKA;[{I|L}A]V[AG]D{I|L}AKA;[{I|L}A]VQD[VG]KV;[{I|L}A]V[AG]D[VG]KV;[RN]V[RN]AKA 7.2503;6.2576;4.8114;3.8186;1.2166 +;-;-;-;- + 732 + 1 2.16 75579.9 1.0 2845 4220 7064 SUDHL4_400M_050219_1,7067 SUDHL4_400M_050219_1,7067,ALVQDLAKA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7068 37.348 186.0 478840.0 25 0 82741.0 23818 LVETYSRLL 9 84 547.314726706745 1092.61490048029 2 547.3138915896416 MULTI CID FTMS 0 0 0 7064 190755.828125 0.5336313878966413 -3 0.1287994384765625 4 Unmodified _LVETYSRLL_ ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23 15.847184025352805 0.4077185912009129 5 V{I|L}{M(Oxidation (M))|F}SKGV 7 7 74.724 0.0 0.0 6.839 0.0 0.0 0.0 359.1708162897094 359.1708162897094 55.26039476245813 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 V{I|L}{M(Oxidation (M))|F}SKGV 6.839 - 169 + 1 2.16 74983.9 1.0 2846 4220 7064 SUDHL4_400M_050219_1,7068 SUDHL4_400M_050219_1,7068,LVETYSRLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7070 37.358 400.0 250270.0 25 0 13965.0 + 33646 SISKALVAY 9 133 476.2797387992696 950.5449246653392 2 476.2809020876884 MULTI CID FTMS 0 0 0 7069 55640.08984375 0.1058821740992049 4 -0.1023292541503906 1 Unmodified _SISKALVAY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000339471.8_1_19:39923915-39924228:-|nuORF 18.1463463914782 0.3454829746528889 5 {[TV]|[{I|L}S]}[KA]VTVAY 9 3 + 32.074 0.0 0.0 3.3743 3.3743 81.301 0.0 0.0 0.0 3.759556258252566 10.875912339897203 3.759556258252566 8.97817481888638 0 1.274227503252014 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}[KA]VTVAY;{[TV]|[{I|L}S]}D[K{I|L}]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[TV]|[{I|L}S]}[KA]VTAVY;{[TV]|[{I|L}S]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[TV]|[{I|L}S]}[KA]VATVY;[KS]A{I|L}VTVAY;[K{I|L}]{[SA]|[TG]}VTVAY;[K{I|L}][KT]EVAY;{[VA]|[{I|L}G]}[KT]VTVAY;{[VA]|[{I|L}G]}{I|L}[KS]TVAY 3.3743;2.4297;2.2149;2.113;1.7129;1.6116;0.90714;0.85901;0.78327;0.72946 -;-;-;-;-;-;-;-;-;- 311 1 2.16 78756.9 1.0 2847 4221 7069 SUDHL4_400M_050219_1,7070 SUDHL4_400M_050219_1,7070,SISKALVAY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7071 37.37 682.0 157850.0 25 0 18584.0 + -1 DTLNPFMTK 9 135 541.760878144519 1081.507203355838 2 541.7618286013603 MULTI CID FTMS 0 0 0 7069 102727.8125 0.4831162673911841 -3 0.1114578247070312 2 Oxidation (M) _DTLNPFM(Oxidation (M))TK_ REV__ENSG00000166278|ENST00000299367|C2;REV__ENST00000486124.5_1_6:31905151-31913001:+|nuORF;REV__nc|ENSG00000166278|P06681-2|C2;REV__nc|ENSG00000166278|P06681-3|C2 25.399314129420983 0.2080152500878129 5 [Q{I|L}]VDPNYAY 9 -1 + 31.903 0.0 0.0 2.9498 2.9498 72.228 0.0 0.0 0.0 0.1882663694469393 5.173553521896178 0.1882663694469393 0.1882663694469393 0 0.6989700043360187 0.0 0.0 0.2059771852360797 [Q{I|L}]VDPNYAY;{[TV]|[{I|L}S]}D{I|L}[HT]YAY;{[TV]|[{I|L}S]}D{I|L}{I|L}[C(Carbamidomethyl (C))Q]AY;{[TV]|[{I|L}S]}EV[HT]YAY;{[TV]|[{I|L}S]}EV{I|L}[C(Carbamidomethyl (C))Q]AY;{I|L}{I|L}NDPNYAY;[Q{I|L}]VDPGGYAY;{[TV]|[{I|L}S]}{I|L}D[HT]YAY;{[TV]|[{I|L}S]}{I|L}D{I|L}[C(Carbamidomethyl (C))Q]AY;{[VA]|[{I|L}G]}AVDPNYAY 2.9498;2.9324;2.9077;2.5869;2.5621;2.3882;2.0984;2.0501;2.0253;2.0112 -;-;-;-;-;-;-;-;-;- 827 1 2.16 86606.3 1.0 2848 4221 7069 SUDHL4_400M_050219_1,7071 SUDHL4_400M_050219_1,7071,DTLNPFMTK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7072 37.374 246.0 226540.0 25 0 30868.0 + -1 FSYTGRVAV 9 92 499.2697013087716 498.2624248421716 1 500.2668640017509 MULTI CID FTMS 0 0 0 7069 104886.1875 0.8665408087570151 2 -0.0516319274902343 3 ENSG00000162413|ENST00000377658|KLHL21;nc|ENSG00000162413|Q9UJP4-2|KLHL21 5 V 1 -1 10.596 0.0 0.0 2.1266 0.0 0.0 381.1830695338692 0.0 381.1830695338692 0.0 0.3183453993468887 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.1266 - 21 + 1 2.16 44065.0 1.0 2849 4221 7069 SUDHL4_400M_050219_1,7072 SUDHL4_400M_050219_1,7072, False False FSYTGRVAV 37.374415 500.266864001751 1307641.25 7069.0 ENSG00000162413|ENST00000377658|KLHL21;;nc|ENSG00000162413|Q9UJP4-2|KLHL21 1.2234967922170956 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7073 37.376 88.0 444520.0 25 0 39674.0 + -1 VAAECGQDTV 10 89 525.2311360611208 0 525.2311279177666 PEAK CID FTMS 0 0 0 7069 412692.5625 0.980718199807854 -3 0.1114578247070312 4 Carbamidomethyl (C) _VAAEC(Carbamidomethyl (C))GQDTV_ REV__ENST00000332598.6_1_5:177022592-177022790:+|nuORF 14.838274106304384 0.3381107837965078 5 S 1 -1 8.8515 0.0 0.0 0.84425 0.0 0.0 523.2106108900165 435.17832361392817 958.3889345039448 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 S 0.84425 - 56 + 1 2.16 35505.6 1.0 2850 4221 7069 SUDHL4_400M_050219_1,7073 SUDHL4_400M_050219_1,7073,VAAECGQDTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7074 37.38 213.0 391300.0 25 0 29179.0 -1 0 115 531.313702198342 530.3064257317419 1 531.3136474490166 MULTI CID FTMS 0 0 0 7069 227654.390625 0.6337015501414683 -3 0.1114578247070312 5 5 {[TV]|[{I|L}S]}AGA{I|L} 6 -1 + 59.997 0.0 0.0 11.314 11.314 91.315 0.0 0.0 0.0 6.632357421061776 11.47025653873947 6.632357421061776 4.427357504614982 0 1.2302046884880935 1.0969100130080565 1.3494850021680094 0.0 {[TV]|[{I|L}S]}AGA{I|L};{[TV]|[{I|L}S]}GAA{I|L};{[TV]|[{I|L}S]}QA{I|L};[AG]{I|L}SA{I|L};{[SA]|[TG]}{I|L}GA{I|L};AS{I|L}GA{I|L};[AG]S{I|L}A{I|L};[Q{I|L}]SA{I|L};{[SA]|[TG]}VAA{I|L};{[VA]|[{I|L}G]}TGA{I|L} 11.314;10.479;10.448;10.063;9.424;9.1507;8.8313;8.7115;8.5892;8.5514 -;-;-;-;-;-;-;-;-;- 233 1 2.16 69065.5 1.0 2851 4221 7069 SUDHL4_400M_050219_1,7074 SUDHL4_400M_050219_1,7074, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7076 37.389 342.0 224470.0 25 0 32459.0 + 11617 GLADPSALTQA 11 115 522.2722312328118 1042.5299095324235 2 522.2720825076103 MULTI CID FTMS 0 0 0 7075 151145.9375 0.2008603572692822 5 -0.1345329284667968 1 Unmodified _GLADPSALTQA_ ENSG00000124535|ENST00000380773|WRNIP1;nc|ENSG00000124535|Q96S55-2|WRNIP1;nc|ENSG00000124535|Q96S55-3|WRNIP1;nc|ENSG00000124535|Q96S55-4|WRNIP1 31.26834338654808 0.3580123756476716 5 {[VA]|[{I|L}G]}[TP]WG{I|L} 7 7 34.358 0.0 0.0 3.2956 0.0 0.0 0.0 315.13401044478604 315.13401044478604 22.226217326673662 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {[VA]|[{I|L}G]}[TP]WG{I|L} 3.2956 - 437 1 2.16 68500.1 1.0 2852 4222 7075 SUDHL4_400M_050219_1,7076 SUDHL4_400M_050219_1,7076,GLADPSALTQA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7077 37.393 206.0 293080.0 25 0 51365.0 + 34253 SLQEKMTEI 9 93 539.7755905415386 1077.536628149877 2 539.7758056521416 MULTI CID FTMS 0 0 0 7075 257879.0 0.1742699738759592 -6 0.2496299743652343 2 Unmodified _SLQEKMTEI_ ENSG00000189233|ENST00000413272|NUGGC 53.40400417844725 0.0329064971918313 5 {[TV]|[{I|L}S]}QEAA{M(Oxidation (M))|F}{I|L}S{I|L} 10 4 + 56.058 0.0 0.0 5.2024 5.2024 79.602 0.0 0.0 0.0 0.5818893275362171 22.83588673652196 0.5818893275362171 1.4391414467918509 0 1.6549471895720984 2.0 0.4247425010840047 1.0189301784845295 {[TV]|[{I|L}S]}QEAA{M(Oxidation (M))|F}{I|L}S{I|L};{[TV]|[{I|L}S]}{[MG]|[TS]}QTE{I|L}S{I|L};{[TV]|[{I|L}S]}Q{[MG]|[TS]}TE{I|L}S{I|L};{[TV]|[{I|L}S]}{[MG]|[TS]}{[ET]|[MV]}Q{I|L}S{I|L};{[TV]|[{I|L}S]}{[MG]|[TS]}[NP]{M(Oxidation (M))|F}{I|L}S{I|L};{[TV]|[{I|L}S]}{[MG]|[TS]}QTVTE{I|L};{[TV]|[{I|L}S]}Q{[MG]|[TS]}TVTE{I|L};{[TV]|[{I|L}S]}{[MG]|[TS]}{[ET]|[MV]}{I|L}QS{I|L};{[TV]|[{I|L}S]}[AG]EAA{M(Oxidation (M))|F}{I|L}S{I|L};[Q{I|L}]{M(Oxidation (M))|F}QTE{I|L}S{I|L} 5.2024;5.0689;4.9742;4.3433;3.8151;3.6282;3.5335;3.5059;3.4063;3.2091 -;-;-;-;-;-;-;-;-;- 1094 1 2.16 49650.3 1.0 2853 4222 7075 SUDHL4_400M_050219_1,7077 SUDHL4_400M_050219_1,7077,SLQEKMTEI True True SLQEKMTEI 37.393067 539.775805652142 7231106.0 7075.0 ENSG00000189233|ENST00000413272|NUGGC 4.720694541931152 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7078 37.4 388.0 204420.0 25 0 14734.0 + 40410 VIFIVPGPV 9 122 470.7954566670766 939.5763604009531 2 470.7953369021416 MULTI CID FTMS 0 0 0 7075 100298.921875 1.0 0 0.0 3 Unmodified _VIFIVPGPV_ REV__ENST00000334793.5_1_1:47906026-47906182:+|nuORF 28.17323086031832 0.1727213568982648 5 V{I|L} 2 -1 45.217 0.0 0.0 4.8124 0.0 0.0 0.0 724.3995972676609 724.3995972676609 16.232492903979008 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 V{I|L} 4.8124 + + 294 + 1 2.16 63068.8 1.0 2854 4222 7075 SUDHL4_400M_050219_1,7078 SUDHL4_400M_050219_1,7078,VIFIVPGPV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7080 37.405 11.0 5284800.0 25 0 479290.0 + 38204 TPRHIIVRF 9 91 380.23280476308383 1137.6765848894515 3 380.2329894900322 MULTI CID FTMS 0 0 0 7079 4435329.0 0.4864831337236902 4 -0.1150131225585937 1 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 22.774965066869 0.2414061210083823 5 TPRH{I|L}{I|L}{M(Oxidation (M))|F}VR 9 2 + 69.232 0.0 0.0 6.0854 6.0854 84.2 0.0 0.0 0.0 48.26329528578694 9.463728584247631 9.463728584247631 3.0102999566398125 0 1.2302046884880935 0.0 0.0 0.0 TPRH{I|L}{I|L}{M(Oxidation (M))|F}VR;TPRH{I|L}{M(Oxidation (M))|F}{I|L}VR;TPRH{M(Oxidation (M))|F}{I|L}{I|L}VR 6.0854;5.8208;4.7046 -;-;- 154 + 1 2.16 52779.9 1.0 2855 4223 7079 SUDHL4_400M_050219_1,7080 SUDHL4_400M_050219_1,7080,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 7081 37.406 60.0 1279800.0 25 0 269020.0 + 38206 TPRHIIVRF 9 56 569.845917728665 1137.67728252413 2 569.8460571169853 MULTI CID FTMS 0 0 0 7079 950801.9375 0.4893820637567074 4 -0.1150131225585937 2 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 27.22323531849824 0.1848086127304535 5 HK 2 8 13.583 0.0 0.0 1.194 0.0 0.0 354.2004883018125 515.2925509088499 869.4930392106623 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 HK 1.194 - 22 + 1 2.16 61525.2 1.0 2856 4223 7079 SUDHL4_400M_050219_1,7081 SUDHL4_400M_050219_1,7081,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 7082 37.408 105.0 528540.0 25 0 98397.0 + 10936 GAKRHSGL 8 92 413.2390174549228 824.4634819766457 2 413.2383605837822 MULTI CID FTMS 0 0 0 7079 592092.1875 0.883359417222752 -1 0.0195198059082031 3 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 2.302733041254933 0.8103549651115762 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 2.16 49344.5 1.0 2857 4223 7079 SUDHL4_400M_050219_1,7082 SUDHL4_400M_050219_1,7082,GAKRHSGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7083 37.414 286.0 235090.0 25 0 40323.0 39831 VEWLLDALY 9 88 561.296924113338 1120.579295293476 2 561.2960082888603 MULTI CID FTMS 0 0 0 7079 149071.53125 0.7382187921630674 -1 0.0195198059082031 4 Unmodified _VEWLLDALY_ ENSG00000103490|ENST00000247470|PYCARD;ENST00000565022.1_1_16:31212908-31213633:-|nuORF;nc|ENSG00000103490|Q9ULZ3-2|PYCARD;nc|ENSG00000103490|Q9ULZ3-3|PYCARD 13.50788311687929 0.4710407108020397 5 AGA{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Y 8 5 38.621 0.0 0.0 3.4465 0.0 0.0 312.17116648663847 0.0 312.17116648663847 0.0 25.48700060070828 0.0 0.0 0 0.5 0.0 0.0 0.0 AGA{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Y 3.4465 - 79 + 1 2.16 55448.1 1.0 2858 4223 7079 SUDHL4_400M_050219_1,7083 SUDHL4_400M_050219_1,7083,VEWLLDALY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7084 37.423 554.0 214560.0 25 0 14697.0 + 1388 ALANHLIKV 9 141 489.8081364574478 977.6017199816956 2 489.8087646365166 MULTI CID FTMS 0 0 0 7079 113846.625 0.9075102736885212 -2 0.0516319274902343 5 Unmodified _ALANHLIKV_ ENSG00000013016|ENST00000322054|EHD3;ENSG00000110047|ENST00000320631|EHD1;ENST00000484846.1_1_11:64621807-64623066:-|nuORF 68.08070601005525 0.0218408846571049 5 A{I|L}ANH{I|L}{I|L}KV 9 0 + 71.174 0.0 0.0 7.2805 7.2805 86.057 0.0 0.0 0.0 18.19820881427724 2.218487496163561 2.218487496163561 2.218487496163561 0 1.9419628234359576 2.0 0.0 0.3494850021680094 + + A{I|L}ANH{I|L}{I|L}KV;A{I|L}ANH{I|L}{I|L}VK;A{I|L}AGGH{I|L}{I|L}KV;A{I|L}AGGH{I|L}{I|L}VK;V[VG]NH{I|L}{I|L}KV;A{I|L}{I|L}{I|L}[WH]{I|L}{I|L};V[VG]NH{I|L}{I|L}VK 7.2805;7.0535;6.3385;6.1116;2.8821;2.8028;2.6552 +;-;-;-;-;-;- + 1027 + 1 2.16 94067.2 1.0 2859 4223 7079 SUDHL4_400M_050219_1,7084 SUDHL4_400M_050219_1,7084,ALANHLIKV True True ALANHLIKV 37.423382 489.808764636517 648768.375 7079.0 ENSG00000110047|ENST00000320631|EHD1;;ENST00000484846.1_1_11:64621807-64623066:-|nuORF;;ENSG00000013016|ENST00000322054|EHD3 5.016101678212483 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7085 37.425 95.0 726910.0 25 0 248620.0 -1 0 76 398.22993408556624 794.4453152379325 2 398.2303039431572 MULTI CID FTMS 0 0 0 7079 486831.75 0.6161899748771505 5 -0.1455230712890625 6 5 D 1 -1 3.9794 0.0 0.0 0.5009 0.0 0.0 397.2518871971558 279.14621912174067 676.3981063188965 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.5009 - 3 + 1 2.16 56937.2 1.0 2860 4223 7079 SUDHL4_400M_050219_1,7085 SUDHL4_400M_050219_1,7085, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7086 37.431 283.0 238540.0 25 0 18052.0 + + 20670 TMADQIVTV 9 116 497.2757783742196 992.5370038152392 2 497.2769042849541 MULTI CID FTMS 0 0 0 7079 98025.4453125 0.749076285531739 -2 0.0516319274902343 7 Unmodified _LLQWAYTV_ ENSG00000116266|ENST00000370008|STXBP3 15.768221252438446 0.6779680726941459 5 C(Carbamidomethyl (C))TV 3 -1 14.055 0.0 0.0 1.416 0.0 0.0 614.3811943443392 0.0 614.3811943443392 0.0 0.559706320125672 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 C(Carbamidomethyl (C))TV 1.416 - 127 + 1 2.16 56958.9 1.0 2861 4223 7079 SUDHL4_400M_050219_1,7086 SUDHL4_400M_050219_1,7086,LLQWAYTV False False TMADQIVTV 37.430659 497.276904284954 836142.8125 7079.0 ENSG00000116266|ENST00000370008|STXBP3 2.387354691823324 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7088 37.438 293.0 220150.0 25 0 34737.0 + 42712 VVAGRMLP 8 111 421.7508639121425 841.487174891085 2 421.7510558962822 MULTI CID FTMS 0 0 0 7087 183568.140625 0.6441900699298705 -4 0.099884033203125 1 Unmodified _VVAGRMLP_ REV__ENSG00000113716|ENST00000502717|HMGXB3 2.889219685676258 0.8067950007271085 5 W 1 -1 0.088644 0.0 0.0 0.010534 0.0 0.0 277.3761041897163 374.9986055963501 652.3747097860663 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.010534 - 2 + 1 2.16 54663.1 1.0 2862 4224 7087 SUDHL4_400M_050219_1,7088 SUDHL4_400M_050219_1,7088,VVAGRMLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7089 37.441 128.0 521490.0 25 0 72362.0 + 31956 RVDPNGSRYLL 11 72 430.57014621814005 1288.68860925462 3 430.5699340701103 MULTI CID FTMS 0 0 0 7087 232196.703125 0.4547653974828662 -4 0.099884033203125 2 Unmodified _RVDPNGSRYLL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 24.881564428377168 0.5079759154518888 5 K{[CA]|SS}Y{I|L}{I|L} 6 7 15.251 0.0 0.0 1.1835 0.0 0.0 579.29399306465 0.0 579.29399306465 0.0 0.6471248870938258 0.0 0.0 0 0.2742275032520141 0.0 0.0 1.0 K{[CA]|SS}Y{I|L}{I|L} 1.1835 - 52 1 2.16 61908.8 1.0 2863 4224 7087 SUDHL4_400M_050219_1,7089 SUDHL4_400M_050219_1,7089,RVDPNGSRYLL False True RVDPNGSRYLL 37.441059 430.56993407011 2893740.5 7087.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;;ENST00000545930.5_1_11:61082914-61091715:-|nuORF;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 0.0963040888309478 3.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7090 37.446 250.0 301410.0 25 0 34548.0 + 8991 FAVGPGHGI 9 91 427.7286758901304 853.4427988470608 2 427.7291442751884 MULTI CID FTMS 0 0 0 7087 199420.421875 0.8656274946402326 -3 0.0822677612304687 3 Unmodified _FAVGPGHGI_ ENSG00000162139|ENST00000294064|NEU3;nc|ENSG00000162139|Q9UQ49|NEU3 20.871210003555333 0.2717241269066626 5 GV{[CP]|[EA]} 4 7 20.445 0.0 0.0 2.3956 0.0 0.0 479.2497795876559 0.0 479.2497795876559 0.0 -4.476212463643421 -4.476212463643421 0.0 0 0.4247425010840047 0.0 0.0 0.0 GV{[CP]|[EA]} 2.3956 - 163 1 2.16 66037.9 1.0 2864 4224 7087 SUDHL4_400M_050219_1,7090 SUDHL4_400M_050219_1,7090,FAVGPGHGI False True FAVGPGHGI 37.445711 427.729144275188 1465042.5 7087.0 ENSG00000162139|ENST00000294064|NEU3;;nc|ENSG00000162139|Q9UQ49|NEU3 0.5573882857958475 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7091 37.451 267.0 430680.0 25 0 77633.0 + 42089 VRDIRWKMW 9 72 645.3518627521163 1288.6891725710325 2 645.3513671755791 MULTI CID FTMS 0 0 0 7087 151320.234375 0.3173367085607916 -4 0.099884033203125 4 Unmodified _VRDIRWKMW_ REV__ENSG00000121377|ENST00000240687|TAS2R7 15.847184025352805 0.4077185912009129 5 {I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}K 5 -1 28.015 0.0 0.0 2.1739 0.0 0.0 0.0 674.3052462213499 674.3052462213499 16.59540112089859 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 {I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}K 2.1739 - 36 + 1 2.16 90437.5 1.0 2865 4224 7087 SUDHL4_400M_050219_1,7091 SUDHL4_400M_050219_1,7091,VRDIRWKMW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7093 37.467 800.0 97806.0 25 0 28290.0 -1 0 32 1191.1538488169492 3570.439717051048 3 1191.823657214642 MULTI CID FTMS 0 0 0 7092 192120.078125 0.2674421745885317 -5 0.1199455261230468 1 5 YG 2 -1 10.969 0.0 0.0 0.30722 0.0 0.0 1984.7112757442103 1362.6404511346882 3347.3517268788983 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.30722 - 4 + 1 2.16 74658.1 0.4399999976158142 2866 4225 7092 SUDHL4_400M_050219_1,7093 SUDHL4_400M_050219_1,7093, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7094 37.473 334.0 315580.0 25 0 30410.0 + 44011 YIFKERESF 9 102 406.8765153805167 0 406.8763915896416 PEAK CID FTMS 0 0 0 7092 136294.421875 0.7565351091774486 -1 0.0200614929199218 2 Unmodified _YIFKERESF_ ENSG00000138303|ENST00000672957|ASCC1;nc|ENSG00000138303|Q8N9N2|ASCC1 32.037481411007896 0.1008621704287274 5 EMT 3 8 15.688 0.0 0.0 1.9326 0.0 0.0 145.44057036657313 302.13788782291255 447.5784581894857 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 EMT 1.9326 - 35 + 1 2.16 89556.4 1.0 2867 4225 7092 SUDHL4_400M_050219_1,7094 SUDHL4_400M_050219_1,7094,YIFKERESF True True YIFKERESF 37.473057 406.876391589642 1203304.03125 7092.0 nc|ENSG00000138303|Q8N9N2|ASCC1;;ENSG00000138303|ENST00000672957|ASCC1 5.52226193745931 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7096 37.478 64.0 586290.0 25 0 48565.0 + 15003 ILSEVQQAV 9 75 493.7794736965542 985.5443944599084 2 493.7796813845634 MULTI CID FTMS 0 0 0 7095 651839.125 0.5196854529096214 4 -0.1584358215332031 1 Unmodified _ILSEVQQAV_ ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226555150-226558263:-|nuORF 50.855029805455786 0.0384952370514206 5 {I|L}{I|L}{[ES]|[DT]|[{I|L}C]}VQ 6 3 38.205 0.0 0.0 3.8765 0.0 0.0 0.0 313.15162970360785 313.15162970360785 17.07203416424356 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.7742275032520141 0.0 + {I|L}{I|L}{[ES]|[DT]|[{I|L}C]}VQ 3.8765 + + 253 1 2.16 35115.0 1.0 2868 4226 7095 SUDHL4_400M_050219_1,7096 SUDHL4_400M_050219_1,7096,ILSEVQQAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7097 37.48 122.0 353850.0 25 0 28748.0 -1 0 61 865.898928520826 1729.7833041084518 2 866.4008056521416 MULTI CID FTMS 0 0 0 7095 404383.28125 0.702143523227615 5 -0.2235565185546875 2 5 DAN{I|L}[DP]{[QN]|[E{I|L}]|[KN]} 8 -1 33.901 0.0 0.0 1.9598 0.0 0.0 844.4203424117583 0.0 844.4203424117583 0.0 16.242209500285014 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 DAN{I|L}[DP]{[QN]|[E{I|L}]|[KN]} 1.9598 - 80 1 2.16 35543.0 1.0 2869 4226 7095 SUDHL4_400M_050219_1,7097 SUDHL4_400M_050219_1,7097, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7098 37.487 377.0 297560.0 25 0 28239.0 + 2056 APLPPHLPGA 10 139 485.2792959137977 968.5440388943954 2 485.2783386111259 MULTI CID FTMS 0 0 0 7095 145985.71875 0.5088330158625041 35 -1.7010040283203125 3 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 40.44857923139169 0.1528301697436547 5 [PA]{I|L}Y[PA]{I|L} 7 5 35.167 0.0 0.0 3.6309 0.0 0.0 0.0 240.09723648644533 240.09723648644533 16.750831893227268 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.0 0.0 [PA]{I|L}Y[PA]{I|L} 3.6309 - 507 1 2.16 87027.4 1.0 2870 4226 7095 SUDHL4_400M_050219_1,7098 SUDHL4_400M_050219_1,7098,APLPPHLPGA False True APLPPHLPGA 37.487242 485.2802 11936354.0 7095.0 LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 6.198250770568848 2.0 True 10.0 False ERV PXD020620_cell_line SUDHL4_400M_050219_1 7099 37.501 800.0 95847.0 25 0 4468.3 -1 0 90 881.9123726664106 1761.8101923996212 2 882.4157592654228 MULTI CID FTMS 0 0 0 7095 99237.1328125 0.4624798103062629 10 -0.6009254455566406 4 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEAQ[YK]E[PA]Q 15 -1 + 55.473 0.0 0.0 3.1486 3.1486 80.377 0.0 0.0 0.0 37.81411260005832 5.386277828772137 5.386277828772137 8.106121657239953 0 0.2742275032520141 0.0 0.0 1.066901560044258 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NEAQ[YK]E[PA]Q;[NP]{I|L}NRS[HD]EN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}NR[HM]AEN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}NRS[HD]EN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NR[HM]AEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGR[HM]AEN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}GGRS[HD]EN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}NRS[HD]EGG{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}NR[HM]AEGG{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N{[CA]|SS}[H{I|L}]AEN{I|L}DP{[QN]|[E{I|L}]|[KN]} 3.1486;2.6885;2.6885;2.2045;2.2045;2.1759;2.1759;2.1759;2.1759;1.6343 -;-;-;-;-;-;-;-;-;- 1335 + 1 2.16 59534.3 0.5299999713897705 2871 4226 7095 SUDHL4_400M_050219_1,7099 SUDHL4_400M_050219_1,7099, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7100 37.515 800.0 126440.0 25 0 9498.3 + 44010 YIFKERESF 9 105 609.8113412747209 1217.6081296162415 2 609.8121215701103 MULTI CID FTMS 0 0 0 7095 88116.3515625 1.0 0 0.0 5 Unmodified _YIFKERESF_ ENSG00000138303|ENST00000672957|ASCC1;nc|ENSG00000138303|Q8N9N2|ASCC1 18.721224879955976 0.3299216912490967 5 Y{I|L}{M(Oxidation (M))|F}KE 5 4 70.261 0.0 0.0 5.7704 0.0 0.0 0.0 534.2356661432249 534.2356661432249 49.291746928241125 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.3807196863200844 + Y{I|L}{M(Oxidation (M))|F}KE 5.7704 + + 114 + 1 2.16 78432.6 0.5600000023841858 2872 4226 7095 SUDHL4_400M_050219_1,7100 SUDHL4_400M_050219_1,7100,YIFKERESF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7102 37.52 124.0 420780.0 25 0 30242.0 -1 GLAYCGLWA 9 87 505.74327980125526 1009.4720066693104 2 505.7436706423759 MULTI CID FTMS 0 0 0 7101 186951.28125 0.5112555089232379 7 -0.3532142639160156 1 Carbamidomethyl (C) _GLAYC(Carbamidomethyl (C))GLWA_ ENST00000531768.1_1_11:77402049-77404650:-|nuORF 20.871210003555333 0.2717241269066626 5 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}AG 5 -1 41.198 0.0 0.0 4.0811 0.0 0.0 0.0 561.2193087213499 561.2193087213499 24.286662482156345 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}AG 4.0811 - 108 + 1 2.16 45302.5 1.0 2873 4227 7101 SUDHL4_400M_050219_1,7102 SUDHL4_400M_050219_1,7102,GLAYCGLWA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7103 37.534 800.0 158810.0 25 0 15973.0 + 20831 LLYQGPHNTL 10 156 578.3118263486897 1154.6090997641793 2 578.3135253787041 MULTI CID FTMS 0 0 0 7101 88556.1796875 0.1498870926895154 -4 0.1150131225585937 2 Unmodified _LLYQGPHNTL_ ENSG00000115232|ENST00000397033|ITGA4;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;nc|ENSG00000115232|P13612-2|ITGA4 89.40071534611396 0.0093765175072318 5 {I|L}{I|L}YQGP[HN]T{I|L} 10 0 + 90.406 0.0 0.0 7.83 7.83 91.658 0.0 0.0 0.0 36.53212513775344 7.396681329232223 7.396681329232223 7.396681329232223 0 0.7742275032520141 2.0 1.7491348669726232 1.5387254899964358 + + {I|L}{I|L}YQGP[HN]T{I|L};{I|L}{I|L}YQGR{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{I|L}{I|L}Y[AG]GP[HN]T{I|L};{I|L}{I|L}Y[AG]GR{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{I|L}{I|L}YQ[TA][YR]Q;{I|L}{I|L}Y{I|L}W{[RE]|[WV]}Y;{I|L}{I|L}[TP]{I|L}YYC(Carbamidomethyl (C)){I|L};{I|L}{I|L}Y{I|L}W{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L};{I|L}{I|L}[TP]{I|L}YYGC{I|L};{I|L}{I|L}Y{I|L}W[WY]V 7.83;7.1894;7.0363;6.3919;5.9304;4.925;3.544;3.4251;3.0022;2.9736 +;-;-;-;-;-;-;-;-;- + 2138 + 1 2.16 98882.4 0.5400000214576721 2874 4227 7101 SUDHL4_400M_050219_1,7103 SUDHL4_400M_050219_1,7103,LLYQGPHNTL True True LLYQGPHNTL 37.533944 578.313525378704 6494025.5 7101.0 ENST00000484404.1_1_2:182322441-182339919:+|nuORF;;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;;nc|ENSG00000115232|P13612-2|ITGA4;;ENSG00000115232|ENST00000397033|ITGA4 7.776819070180257 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7104 37.537 153.0 485620.0 25 0 55321.0 + 20650 RLSPVSPAL 9 91 470.2846241624547 938.5546953917094 2 470.2850219607353 MULTI CID FTMS 0 0 0 7101 191037.703125 0.5074510523007226 -3 0.0843772888183593 3 Unmodified _LLQERPAL_ ENSG00000168806|ENST00000305641|LCMT2;ENST00000567039.1_1_15:43620629-43622752:-|nuORF 32.116972079565 0.368454113111938 5 SPA{I|L} 4 5 32.479 0.0 0.0 3.4606 0.0 0.0 552.3395206813424 0.0 552.3395206813424 0.0 10.42796583575644 0.0 0.0 0 1.4291746928241125 0.0 0.5 0.0 SPA{I|L} 3.4606 - 235 1 2.16 63050.2 1.0 2875 4227 7101 SUDHL4_400M_050219_1,7104 SUDHL4_400M_050219_1,7104,LLQERPAL False False RLSPVSPAL 37.536975 470.285021960735 2220176.0 7101.0 ENSG00000168806|ENST00000305641|LCMT2;;ENST00000567039.1_1_15:43620629-43622752:-|nuORF 3.407510757446289 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7105 37.545 476.0 322010.0 25 0 77209.0 + 8781 EVTTIRNF 8 134 490.2644419201981 0 490.2643310427666 PEAK CID FTMS 0 0 0 7101 100138.15625 0.8008388709705434 -1 0.0419158935546875 4 Unmodified _EVTTIRNF_ REV__ENSG00000108061|ENST00000369452|SHOC2;REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2 23.1484247019978 0.3584660196589264 5 EVT 3 -1 17.664 0.0 0.0 1.8052 0.0 0.0 165.07840378021518 481.2528170221313 646.3312208023465 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 EVT 1.8052 + + 302 + 1 2.16 121402.6 1.0 2876 4227 7101 SUDHL4_400M_050219_1,7105 SUDHL4_400M_050219_1,7105,EVTTIRNF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7107 37.562 800.0 62009.0 25 0 15185.0 -1 0 42 1178.1542460867893 3531.440908860568 3 1178.824145495892 MULTI CID FTMS 0 0 0 7106 113769.8046875 0.6399391091436214 -2 0.0724258422851562 1 5 {M(Oxidation (M))|F}G 2 -1 7.9588 0.0 0.0 0.22537 0.0 0.0 2000.688297631856 1323.6416548487832 3324.329952480639 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.22537 - 14 + 1 2.16 52648.0 0.4399999976158142 2877 4228 7106 SUDHL4_400M_050219_1,7107 SUDHL4_400M_050219_1,7107, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7108 37.569 412.0 185160.0 25 0 16065.0 + + 9067 KLHGLNINY 9 122 536.295965240538 1070.5773775478758 2 536.3016235232353 MULTI CID FTMS 0 0 0 7106 124703.265625 0.1331166363950781 20 -1.1091041564941406 2 Unmodified _FFALIALNY_ ENST00000446317.1_1_20:3470413-3470686:-|nuORF;ENSG00000183431|ENST00000373019|SF3A3 18.13498045792455 0.3457906370836843 5 {[YD]|[{M(Oxidation (M))|F}M]}KKK{I|L}NY 8 -1 {[YD]|[{M(Oxidation (M))|F}M]}KKK{I|L} + + 24.698 -4.7501 -0.61256 2.3069 2.3069 53.194 0.0 0.0 0.0 0.0 11.933364010718126 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.2887254899964357 {[YD]|[{M(Oxidation (M))|F}M]}KKK{I|L}NY 2.3069 - 124 + 1 2.16 60204.8 1.0 2878 4228 7106 SUDHL4_400M_050219_1,7108 SUDHL4_400M_050219_1,7108,FFALIALNY False False KLHGLNINY 37.569214 536.3032 851298.0 7106.0 ENST00000446317.1_1_20:3470413-3470686:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 1.4420062998930614 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7109 37.581 667.0 159080.0 25 0 14125.0 + 34972 SQLIQREF 8 134 510.7774515461317 1019.5403501590636 2 510.7776672244072 MULTI CID FTMS 0 0 0 7106 98777.734375 0.8904000625921973 -1 0.0305099487304687 3 Unmodified _SQLIQREF_ ENSG00000154518|ENST00000284727|ATP5MC3;ENST00000497075.5_1_2:176043783-176046391:-|nuORF 56.17704186161178 0.1143274477948619 5 {[QS]|[NT]}{I|L}H 4 5 42.817 0.0 0.0 4.1997 0.0 0.0 0.0 551.2940482393947 551.2940482393947 30.598943791441968 0.0 0.0 0.0 0 1.0 1.0 0.2059771852360797 0.805462187404089 {[QS]|[NT]}{I|L}H 4.1997 - 285 1 2.16 85583.1 1.0 2879 4228 7106 SUDHL4_400M_050219_1,7109 SUDHL4_400M_050219_1,7109,SQLIQREF True True SQLIQREF 37.580815 510.777667224407 656029.875 7106.0 ENST00000497075.5_1_2:176043783-176046391:-|nuORF;;ENSG00000154518|ENST00000284727|ATP5MC3 2.12886130809784 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7110 37.595 800.0 225810.0 25 0 13811.0 -1 YLFYCKNCRFY 11 142 788.855031529977 1575.695510126754 2 788.8545410037041 MULTI CID FTMS 0 0 0 7106 92854.15625 0.108003378371256 -4 0.1148872375488281 4 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 5 {[QN]|[E{I|L}]|[KN]}AGA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQNA{M(Oxidation (M))|F}Y 14 -1 + 94.284 0.0 0.0 5.9837 5.9837 83.237 0.0 0.0 0.0 12.801825680715254 52.74274479667496 12.801825680715254 2.3811907274898374 0 0.968765315847925 0.0 0.91944517631652 3.70205343810445 {[QN]|[E{I|L}]|[KN]}AGA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AG[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AMYQAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}QA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AQQWT[HA];{[QN]|[E{I|L}]|[KN]}AQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}A[AG]QNA{M(Oxidation (M))|F}Y 5.9837;5.8325;5.5692;5.4093;5.4093;5.4093;5.3812;5.3465;5.3057;5.2568 -;-;-;-;-;-;-;-;-;- 25787 1 2.16 124796.1 0.5600000023841858 2880 4228 7106 SUDHL4_400M_050219_1,7110 SUDHL4_400M_050219_1,7110,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7112 37.604 308.0 331920.0 25 0 29557.0 + 14087 IAPPVPLKA 9 97 453.2945198219893 904.5744867107786 2 453.2945129275322 MULTI CID FTMS 0 0 0 7111 183311.78125 0.2648897907841112 9 -0.6435089111328125 1 Unmodified _IAPPVPLKA_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 20.453626601364224 0.2830276176381075 5 [{I|L}A]PPV[{I|L}P]KA 9 0 + 35.371 0.0 0.0 3.9103 3.9103 85.982 0.0 0.0 0.0 18.715937404694724 0.946687212741054 0.946687212741054 14.980037618328495 0 0.4247425010840047 1.6989700043360187 0.0 0.2215141619232908 + + [{I|L}A]PPV[{I|L}P]KA;[{I|L}A][VS][K{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.9103;2.2542 +;- + 83 + 1 2.169 84214.1 1.0 2881 4229 7111 SUDHL4_400M_050219_1,7112 SUDHL4_400M_050219_1,7112,IAPPVPLKA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7113 37.606 109.0 549320.0 25 0 60296.0 11777 GLLAWLQTV 9 95 500.79355956722486 999.5725662012496 2 501.2969543337822 MULTI CID FTMS 0 0 0 7111 389790.78125 0.7069957253679258 -2 0.0797386169433593 2 Unmodified _GLLAWLQTV_ ENST00000555004.2_3_14:96554171-96554918:+|nuORF 47.74868867922204 0.0453060283459952 5 {[VA]|[{I|L}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QTV 9 0 + 43.768 0.0 0.0 4.3787 4.3787 80.271 0.0 0.0 0.0 15.530155594481492 3.979400086720368 3.979400086720368 3.979400086720368 0 0.5649093276264391 1.6989700043360187 0.2302046884880938 0.8807196863200843 + + {[VA]|[{I|L}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QTV;{[VA]|[{I|L}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QS{I|L};{[VA]|[{I|L}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[AG]TV;{[VA]|[{I|L}G]}{I|L}SK[WP]TV;[{I|L}V][WR]QVTV;{[VA]|[{I|L}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[AG]S{I|L};{[VA]|[{I|L}G]}{I|L}SK[WP]S{I|L};[{I|L}V][WR][AG]VTV 4.3787;3.9806;2.5764;2.3222;2.3048;2.1783;1.9241;1.3782 +;-;-;-;-;-;-;- + 415 + 1 2.169 51898.3 1.0 2882 4229 7111 SUDHL4_400M_050219_1,7113 SUDHL4_400M_050219_1,7113,GLLAWLQTV True False GLIDRQVTV 37.606439 501.296954333782 4579798.0 7111.0 ENSG00000127603|ENST00000564288|MACF1;;nc|ENSG00000127603|Q9UPN3-5|MACF1;;nc|ENSG00000127603|Q9UPN3|MACF1 2.1710551579793296 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7114 37.61 194.0 464180.0 25 0 41417.0 + 1746 ALQPEPIKV 9 111 497.8004090459922 993.5862651587844 2 497.8000671267509 MULTI CID FTMS 0 0 0 7111 261683.8125 0.1667363302755947 -3 0.1216545104980468 3 Unmodified _ALQPEPIKV_ ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF 30.63653989081413 0.1413794767160703 5 [{I|L}A]Q 3 6 30.942 0.0 0.0 3.1142 0.0 0.0 0.0 678.3822300848188 678.3822300848188 8.602742452648023 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + [{I|L}A]Q 3.1142 + + 251 1 2.169 75322.2 1.0 2883 4229 7111 SUDHL4_400M_050219_1,7114 SUDHL4_400M_050219_1,7114,ALQPEPIKV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7115 37.613 127.0 396920.0 25 0 50254.0 + 25818 NLAENISRV 9 75 508.280220986848 1014.545889040496 2 508.2802001833916 MULTI CID FTMS 0 0 0 7111 229592.828125 0.2663334820340724 -2 0.0797386169433593 4 Unmodified _NLAENISRV_ ENSG00000068976|ENST00000164139|PYGM;ENSG00000100504|ENST00000216392|PYGL;ENSG00000100994|ENST00000216962|PYGB;nc|ENSG00000068976|P11217-2|PYGM;nc|ENSG00000100504|P06737-2|PYGL 34.93206674587334 0.1032771302489716 5 {[QV]|[N{I|L}]|[RA]|[KV]}AEN{I|L}SRV 9 0 + 59.178 0.0 0.0 5.833 5.833 89.476 0.0 0.0 0.0 48.20911423856934 5.440272245059212 5.440272245059212 9.208187539523747 0 0.9247425010840048 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}AEN{I|L}SRV;{[QV]|[N{I|L}]|[RA]|[KV]}AEGG{I|L}SRV;{[QV]|[N{I|L}]|[RA]|[KV]}A[{I|L}A][DG]SRV;{[QV]|[N{I|L}]|[RA]|[KV]}V[VG][DG]SRV 5.833;4.9254;3.3739;2.5843 +;-;-;- + 123 + 1 2.169 47748.5 1.0 2884 4229 7111 SUDHL4_400M_050219_1,7115 SUDHL4_400M_050219_1,7115,NLAENISRV True True NLAENISRV 37.61276 508.280200183392 4095875.5 7111.0 nc|ENSG00000100504|P06737-2|PYGL;;ENSG00000100504|ENST00000216392|PYGL;;ENSG00000100994|ENST00000216962|PYGB;;ENSG00000068976|ENST00000164139|PYGM;;nc|ENSG00000068976|P11217-2|PYGM 5.840693473815918 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7116 37.618 262.0 271940.0 25 0 21005.0 + 14737 ILATAVYQA 9 104 475.272710968936 948.530869004672 2 475.2718994021416 MULTI CID FTMS 0 0 0 7111 124494.6484375 0.7551604851356457 -1 0.0492286682128906 5 Unmodified _ILATAVYQA_ ENSG00000136146|ENST00000258648|MED4;nc|ENSG00000136146|Q9NPJ6-2|MED4 23.1484247019978 0.2366544122328345 5 {I|L}{I|L}[QT]{I|L} 5 5 19.309 0.0 0.0 2.0357 0.0 0.0 0.0 377.1508390576594 377.1508390576594 6.210149894766701 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 {I|L}{I|L}[QT]{I|L} 2.0357 - 142 1 2.169 62154.3 1.0 2885 4229 7111 SUDHL4_400M_050219_1,7116 SUDHL4_400M_050219_1,7116,ILATAVYQA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7117 37.631 800.0 77159.0 25 0 6822.0 + 29805 QQGPVGVNVTY 11 122 581.2990105396792 1160.5834681461583 2 581.2991821169853 MULTI CID FTMS 0 0 0 7111 99549.703125 1.0 0 0.0 6 Unmodified _QQGPVGVNVTY_ ENSG00000196924|ENST00000369850|FLNA;nc|ENSG00000196924|P21333-2|FLNA 32.78568957990786 0.3235288296534633 5 NR{[QV]|[N{I|L}]|[RA]|[KV]}TY 6 8 33.02 0.0 0.0 2.8452 0.0 0.0 381.191104357185 0.0 381.191104357185 0.0 22.83940798553715 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.805462187404089 NR{[QV]|[N{I|L}]|[RA]|[KV]}TY 2.8452 - 354 + 1 2.169 52442.9 0.5699999928474426 2886 4229 7111 SUDHL4_400M_050219_1,7117 SUDHL4_400M_050219_1,7117,QQGPVGVNVTY False True QQGPVGVNVTY 37.631431 581.299182116985 470716.125 7111.0 ENSG00000196924|ENST00000369850|FLNA;;nc|ENSG00000196924|P21333-2|FLNA 5.135501543680827 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7119 37.645 620.0 208080.0 25 0 13167.0 + 1873 ALVQDLAKA 9 156 464.7764645688513 927.5383762045026 2 464.7765991091728 MULTI CID FTMS 0 0 0 7118 87006.65625 0.1355747388657294 6 -0.4424896240234375 1 Unmodified _ALVQDLAKA_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 62.57269311338072 0.0246576765497938 5 [{I|L}A]VQD{I|L}AKA 9 0 + 71.178 0.0 0.0 7.6738 7.6738 93.735 0.0 0.0 0.0 48.37803085023717 8.579154000322816 8.579154000322816 9.208187539523747 0 1.1237125054200234 2.0 0.3807196863200844 0.9634679910804403 + + [{I|L}A]VQD{I|L}AKA;[{I|L}A]V[AG]D{I|L}AKA;[{I|L}A]V[TP]{[SA]|[TG]}AKA;[{I|L}A]VQ[KS]SPV;[{I|L}A]VQ[KS]SVP;[{I|L}A]V[TP][QT]KA;[{I|L}A]V[AG][KS]SPV;[{I|L}A]V[AG][KS]SVP 7.6738;6.6811;4.5261;4.1575;4.0702;3.9856;3.1648;3.0774 +;-;-;-;-;-;-;- + 893 + 1 2.169 99648.0 1.0 2887 4230 7118 SUDHL4_400M_050219_1,7119 SUDHL4_400M_050219_1,7119,ALVQDLAKA True True ALVQDLAKA 37.644804 464.776599109173 6487482.5 7118.0 ENSG00000134057|ENST00000256442|CCNB1;;nc|ENSG00000134057|P14635-2|CCNB1 6.474947134653728 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7120 37.647 114.0 748500.0 25 0 31032.0 -1 FYEWECKQRMR 11 95 824.8716287557273 1647.7287045782546 2 824.8715698122978 MULTI CID FTMS 0 0 0 7118 463827.25 0.5861810841485514 -1 0.0367813110351562 2 Carbamidomethyl (C),Oxidation (M) _FYEWEC(Carbamidomethyl (C))KQRM(Oxidation (M))R_ ENSG00000120658|ENST00000690772|ENOX1;nc|ENSG00000120658|Q8TC92-2|ENOX1 1.4819007175156935 0.86815623132643 5 AQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 9 -1 60.169 0.0 0.0 3.6516 0.0 0.0 580.2233143537125 0.0 580.2233143537125 0.0 24.834558786262804 0.0 0.0 0 0.75 0.0 0.0 0.805462187404089 AQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 3.6516 - 462 1 2.169 65793.5 1.0 2888 4230 7118 SUDHL4_400M_050219_1,7120 SUDHL4_400M_050219_1,7120,FYEWECKQRMR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7121 37.651 226.0 261720.0 25 0 21089.0 + 26237 NQKDGMVSF 9 94 513.2397399205295 1024.4649269078589 2 513.2402831912041 MULTI CID FTMS 0 0 0 7118 151113.921875 0.1012345130824007 -4 0.1584358215332031 3 Unmodified _NQKDGMVSF_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 29.081581746732265 0.1611639662936252 5 {[CP]|[EA]}CV[RD]VS{M(Oxidation (M))|F} 9 6 + 32.029 0.0 0.0 3.1265 3.1265 84.143 0.0 0.0 0.0 4.070677831939314 11.56727094955209 4.070677831939314 13.735899786366236 0 0.8935078169319297 0.0 0.3494850021680094 0.4247425010840047 {[CP]|[EA]}CV[RD]VS{M(Oxidation (M))|F};[VS]W[WD]VS{M(Oxidation (M))|F} 3.1265;1.7857 -;- 171 1 2.169 48591.2 1.0 2889 4230 7118 SUDHL4_400M_050219_1,7121 SUDHL4_400M_050219_1,7121,NQKDGMVSF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7122 37.665 800.0 154300.0 25 0 7302.0 + 11665 GLDPGKQIKL 10 148 534.8240383273024 1067.6335237214048 2 534.8241454958916 MULTI CID FTMS 0 0 0 7118 101613.7265625 0.6377781615593641 3 -0.2296676635742187 4 Unmodified _GLDPGKQIKL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 23.78978130925829 0.4341852049148378 5 {[VA]|[{I|L}G]}DP 4 6 37.536 0.0 0.0 3.5158 0.0 0.0 0.0 682.4248140924436 682.4248140924436 18.6575848455354 0.0 0.0 0.0 0 0.8494850021680094 1.5228787452803376 0.0 0.0 + {[VA]|[{I|L}G]}DP 3.5158 + + 297 + 1 2.169 96814.6 0.5600000023841858 2890 4230 7118 SUDHL4_400M_050219_1,7122 SUDHL4_400M_050219_1,7122,GLDPGKQIKL False True GLDPGKQIKL 37.665312 534.824145495892 1026777.0625 7118.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 3.819522619247437 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7123 37.67 236.0 292140.0 25 0 34947.0 + 43574 YADPTKRLEL 10 91 402.5557049672751 0 402.5554687380791 PEAK CID FTMS 0 0 0 7118 98848.4296875 0.694038245774669 -1 0.0367813110351562 5 Unmodified _YADPTKRLEL_ ENSG00000148308|ENST00000372097|GTF3C5;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5 14.837902256254086 0.3381136046434444 5 KK 2 9 10.969 0.0 0.0 1.3659 0.0 0.0 145.67896256951275 398.19721252291816 543.8761750924309 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KK 1.3659 - 13 + 1 2.169 56791.8 1.0 2891 4230 7118 SUDHL4_400M_050219_1,7123 SUDHL4_400M_050219_1,7123,YADPTKRLEL False True YADPTKRLEL 37.66972 402.555468738079 942605.0 7118.0 ENSG00000148308|ENST00000372097|GTF3C5;;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5 6.133959611256917 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7124 37.684 800.0 149730.0 25 0 9001.6 38776 TVDIAISEEEE 11 138 617.787441101106 1233.5603292690118 2 617.7878906130791 MULTI CID FTMS 0 0 0 7118 95660.78125 1.0 0 0.0 6 Unmodified _TVDIAISEEEE_ ENSG00000136546|ENST00000643258|SCN7A;ENST00000424326.5_1_2:167262092-167297919:-|nuORF 8.745405648335112 0.8338865417133445 5 MT{I|L}TTQK 7 10 39.388 0.0 0.0 3.193 0.0 0.0 412.1287929167863 0.0 412.1287929167863 0.0 4.708124797421853 0.0 0.0 0 0.5 0.0 0.6421590589602533 0.384400500525261 MT{I|L}TTQK 3.193 - 349 + 1 2.169 94639.5 0.5699999928474426 2892 4230 7118 SUDHL4_400M_050219_1,7124 SUDHL4_400M_050219_1,7124,TVDIAISEEEE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7125 37.697 751.0 197390.0 25 0 34322.0 + 13656 HPSPSLALI 9 162 467.772292460066 933.530031986932 2 467.7718078494072 MULTI CID FTMS 0 0 0 7118 91806.609375 0.6592938684653513 -1 0.0367813110351562 7 Unmodified _HPVQLDLL_ ENST00000577286.5_1_17:79993838-79994415:-|nuORF;ENST00000580750.5_1_17:79994229-79994415:-|nuORF 44.40701690623563 0.1655546087385432 5 [{I|L}T]H[PG][PS]{I|L}{I|L} 9 6 + 36.724 0.0 0.0 3.9339 3.9339 76.003 0.0 0.0 0.0 0.7378621416091917 25.48697715257781 0.7378621416091917 1.546622955658762 0 1.25 0.0 1.790287727315686 0.0 [{I|L}T]H[PG][PS]{I|L}{I|L};[PS]H[{I|L}A][PS]{I|L}{I|L};[{I|L}T]H[PS][PG]{I|L}{I|L};[PS]H[{I|L}T][PG]{I|L}{I|L};[PG]{I|L}TH[PS]{I|L}{I|L};[{I|L}T][PG]H[PS]{I|L}{I|L};[{I|L}T]H[PG]{I|L}[PS]{I|L};[{I|L}A][PS]H[PS]{I|L}{I|L};[PS]H[VP][TA]{I|L}{I|L};[VP]ATH[PS]{I|L}{I|L} 3.9339;3.7682;3.6114;3.4458;3.2565;3.0484;3.0329;2.9991;2.9299;2.9163 -;-;-;-;-;-;-;-;-;- 1161 1 2.169 114960.3 1.0 2893 4230 7118 SUDHL4_400M_050219_1,7125 SUDHL4_400M_050219_1,7125,HPVQLDLL False False HPSPSLALI 37.696547 467.771807849407 932074.1875 7118.0 ENST00000577286.5_1_17:79993838-79994415:-|nuORF;;ENST00000580750.5_1_17:79994229-79994415:-|nuORF 2.5401477018992105 2.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7127 37.703 139.0 295800.0 25 0 43703.0 + 34254 SLQEKMTEI 9 82 539.7755905415386 1077.536628149877 2 539.7759887576103 MULTI CID FTMS 0 0 0 7126 293663.96875 0.1984528098929071 3 -0.1715736389160156 1 Unmodified _SLQEKMTEI_ ENSG00000189233|ENST00000413272|NUGGC 16.149105407346934 0.3995459350917656 5 {[TV]|[{I|L}S]}QE 4 5 38.94 0.0 0.0 3.6138 0.0 0.0 0.0 617.2950564548177 617.2950564548177 24.336068845642203 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[TV]|[{I|L}S]}QE 3.6138 + + 67 1 2.186 36940.8 1.0 2894 4231 7126 SUDHL4_400M_050219_1,7127 SUDHL4_400M_050219_1,7127,SLQEKMTEI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7128 37.705 69.0 964830.0 25 0 260820.0 16797 KGLGGTRH 8 74 413.2390174549228 824.4634819766457 2 413.2402831912041 MULTI CID FTMS 0 0 0 7126 349468.1875 0.521381671579464 7 -0.5416069030761719 2 Unmodified _KGLGGTRH_ ENST00000305850.9_1_16:81040200-81040455:+|nuORF 2.302733041254933 0.8103549651115762 5 Q 1 8 5.4846 0.0 0.0 0.66523 0.0 0.0 430.251367574105 263.14008508853755 693.3914526626426 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.66523 - 5 + 1 2.186 57582.6 1.0 2895 4231 7126 SUDHL4_400M_050219_1,7128 SUDHL4_400M_050219_1,7128,KGLGGTRH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7129 37.707 98.0 510540.0 25 0 52598.0 + 40390 VIDGHIYAV 9 80 493.76830327194574 985.5220536106916 2 493.7682678103447 MULTI CID FTMS 0 0 0 7126 385609.75 1.0 0 0.0 3 Unmodified _VIDGHIYAV_ ENSG00000079999|ENST00000171111|KEAP1 30.22481116460888 0.1466181017706357 5 [{I|L}V][HT]{I|L}{I|L} 6 5 28.178 0.0 0.0 2.8592 0.0 0.0 0.0 306.08457361392817 306.08457361392817 13.485221620214103 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 [{I|L}V][HT]{I|L}{I|L} 2.8592 - 109 + 1 2.186 40821.1 1.0 2896 4231 7126 SUDHL4_400M_050219_1,7129 SUDHL4_400M_050219_1,7129,VIDGHIYAV False True VIDGHIYAV 37.706988 493.768267810345 1726441.0 7126.0 ENSG00000079999|ENST00000171111|KEAP1 3.841888904571533 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7130 37.711 202.0 335400.0 25 0 71188.0 + -1 LQRMAGRL 8 72 480.7736339462892 959.5327149593784 2 480.7723876833916 MULTI CID FTMS 0 0 0 7126 238153.328125 0.9188982466564884 -4 0.181640625 4 Oxidation (M) _LQRM(Oxidation (M))AGRL_ REV__ENSG00000121851|ENST00000369314|POLR3GL 18.13498045792455 0.6430038125133779 5 {I|L} 1 -1 14.604 0.0 0.0 1.522 0.0 0.0 828.4377575392597 0.0 828.4377575392597 0.0 -7.088016377048341 -7.088016377048341 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.522 + + 43 + 1 2.186 58196.1 1.0 2897 4231 7126 SUDHL4_400M_050219_1,7130 SUDHL4_400M_050219_1,7130,LQRMAGRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7131 37.715 203.0 264730.0 25 0 25188.0 + 17301 KLSEGVTISY 10 76 548.797349333862 1095.580145734524 2 548.7973510622978 MULTI CID FTMS 0 0 0 7126 231687.359375 1.0 0 0.0 5 Unmodified _KLSEGVTISY_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 29.84058131909904 0.2982332456971691 5 WW[K{I|L}]T{I|L}SY 8 6 + 53.901 0.0 0.0 4.9199 4.9199 78.08 0.0 0.0 0.0 0.8591462870659328 16.40978057358332 0.8591462870659328 0.8591462870659328 0 1.0 0.0 0.8494850021680094 0.0 WW[K{I|L}]T{I|L}SY;{[TV]|[{I|L}S]}[DG][K{I|L}]T{I|L}SY;[K{I|L}]WWT{I|L}SY;WW[VP]K{I|L}[HM];{[TV]|[{I|L}S]}[DG][VP]K{I|L}[HM];WW[K{I|L}][VP][HM] 4.9199;4.8414;4.2096;0.80998;0.73156;0.083531 -;-;-;-;-;- 104 1 2.186 45013.9 1.0 2898 4231 7126 SUDHL4_400M_050219_1,7131 SUDHL4_400M_050219_1,7131,KLSEGVTISY False True KLSEGVTISY 37.714711 548.797351062298 1320342.875 7126.0 nc|ENSG00000150093|P05556-2|ITGB1;;nc|ENSG00000150093|P05556-4|ITGB1;;nc|ENSG00000150093|P05556-5|ITGB1;;ENSG00000150093|ENST00000302278|ITGB1;;nc|ENSG00000150093|P05556-3|ITGB1 4.916280428568522 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7132 37.72 288.0 231360.0 25 0 32611.0 41594 VPPKVTTT 8 113 421.7508639121425 841.487174891085 2 421.7513000369072 MULTI CID FTMS 0 0 0 7126 191702.625 0.6727361675290148 3 -0.1715736389160156 6 Unmodified _VPPKVTTT_ ENSG00000113249|ENST00000523175|HAVCR1 2.577480529830294 0.808687252328423 5 {I|L} 1 8 9.0344 0.0 0.0 1.0736 0.0 0.0 710.392385317646 0.0 710.392385317646 0.0 9.03437700822769 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0736 - 6 + 1 2.186 55604.0 1.0 2899 4231 7126 SUDHL4_400M_050219_1,7132 SUDHL4_400M_050219_1,7132,VPPKVTTT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7133 37.723 159.0 374680.0 25 0 52878.0 + 34183 SLNEYQPKL 9 85 546.2908457559014 1090.567138578603 2 546.2906371951103 MULTI CID FTMS 0 0 0 7126 162044.421875 0.5001676896523186 -1 0.0651206970214843 7 Unmodified _SLNEYQPKL_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1 34.40172386719151 0.1061884637610825 5 {[TV]|[{I|L}S]}NEYQP[K{I|L}] 9 0 + 64.147 0.0 0.0 5.882 5.882 89.634 0.0 0.0 0.0 35.24613421077092 4.762036441594191 4.762036441594191 9.208187539523747 0 0.3807196863200844 2.0 0.0 0.9247425010840048 + + {[TV]|[{I|L}S]}NEYQP[K{I|L}];{[TV]|[{I|L}S]}NEY[AG]P[K{I|L}];{[TV]|[{I|L}S]}GGEYQP[K{I|L}];{[TV]|[{I|L}S]}NEY[KA]A[VP];{[TV]|[{I|L}S]}GGEY[AG]P[K{I|L}];{[TV]|[{I|L}S]}GGEY[KA]A[VP];{[TV]|[{I|L}S]}N{[ET]|[MV]}[RV]{[WS]|[C(Carbamidomethyl (C)){I|L}]} 5.882;5.0376;5.0376;4.5582;4.1973;3.7178;2.2609 +;-;-;-;-;-;- + 204 + 1 2.186 52311.6 1.0 2900 4231 7126 SUDHL4_400M_050219_1,7133 SUDHL4_400M_050219_1,7133,SLNEYQPKL True True SLNEYQPKL 37.723149 546.29063719511 1851426.625 7126.0 nc|ENSG00000131018|Q8NF91-2|SYNE1;;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;;nc|ENSG00000131018|Q8NF91-4|SYNE1;;ENSG00000131018|ENST00000367255|SYNE1;;nc|ENSG00000131018|Q8NF91-8|SYNE1 7.005466143290202 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7134 37.737 800.0 168200.0 25 0 8420.1 -1 RWRCDCRWFRF 11 134 872.908385557504 1743.8022181818078 2 872.9081298708916 MULTI CID FTMS 0 0 0 7126 107996.84375 0.485700098969909 -2 0.1019020080566406 8 2 Carbamidomethyl (C) _RWRC(Carbamidomethyl (C))DC(Carbamidomethyl (C))RWFRF_ ENST00000602980.1_1_7:29725056-29725440:+|nuORF 0.3070304955306653 0.8736993455979228 5 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NE[MT][RH]M{I|L}Q 14 -1 + 70.32 0.0 0.0 4.0326 4.0326 75.07 0.0 0.0 0.0 2.2801289821487245 2.2801289821487245 2.2801289821487245 0.5676571578941036 0 1.1549471895720984 0.0 0.0 1.6409593382398109 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NE[MT][RH]M{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQNE[DV]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQQQ[NS]{I|L}Q;[NP]{I|L}[TP]{[HG]|PP}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAHHP[DV]{I|L}Q;[NP]{I|L}[{M(Oxidation (M))|F}V]HHAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[Y{I|L}]M[YK]Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEN{M(Oxidation (M))|F}{[HG]|PP}[NS]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEN[KC]P[DV]{I|L}Q;[NP]{I|L}[{M(Oxidation (M))|F}V][KC]NEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.0326;4;3.9316;3.9018;3.7418;3.6897;3.4593;3.2834;3.1946;3.1425 -;-;-;-;-;-;-;-;-;- 705 + 1 2.186 94087.0 0.6200000047683716 2901 4231 7126 SUDHL4_400M_050219_1,7134 SUDHL4_400M_050219_1,7134,RWRCDCRWFRF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7135 37.751 800.0 144050.0 25 0 9647.0 + 20838 LMAEMGVHSV 10 156 537.2598279950074 1072.5051030568147 2 537.2592651247978 MULTI CID FTMS 0 0 0 7126 98992.9609375 1.0 0 0.0 9 Unmodified _LMAEMGVHSV_ ENSG00000198276|ENST00000354216|UCKL1;ENST00000358711.7_1_20:62571331-62572425:-|nuORF;nc|ENSG00000198276|Q9NWZ5-4|UCKL1 52.268347100219714 0.0668375294751462 5 {I|L}MAEMR[HS]V 9 2 + 64.874 0.0 0.0 6.0488 6.0488 81.415 0.0 0.0 0.0 10.210501635228766 0.8297423506476491 0.8297423506476491 0.8297423506476491 0 0.6989700043360187 1.6989700043360187 1.110924374808178 0.0 {I|L}MAEMR[HS]V;{I|L}MAEMR[VS]H;{I|L}MAEM[VG][HS]V;{I|L}MAEM[VG][VS]H;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PRMEA[EP];{I|L}MAEM[WR]H;{I|L}MA[YG]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}Y;{I|L}MAEM[WP]PV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P[VG]MEA[EP];{I|L}M[YQ]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}Y 6.0488;5.9715;5.1903;5.1129;5.0968;5.0416;4.7814;4.4713;4.2383;4.1281 -;-;+;-;-;-;-;-;-;- + 691 + 1 2.186 90000.4 0.5400000214576721 2902 4231 7126 SUDHL4_400M_050219_1,7135 SUDHL4_400M_050219_1,7135,LMAEMGVHSV True True LMAEMGVHSV 37.750843 537.259265124798 523018.78125 7126.0 nc|ENSG00000198276|Q9NWZ5-4|UCKL1;;ENST00000358711.7_1_20:62571331-62572425:-|nuORF;;ENSG00000198276|ENST00000354216|UCKL1 6.664137522379558 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7136 37.765 800.0 186200.0 25 0 12963.0 + 34841 SQFTDGQQLY 10 168 593.7727135578405 1185.5308741824808 2 593.7731811404228 MULTI CID FTMS 0 0 0 7126 83984.984375 0.475936135235364 -1 0.0651206970214843 10 Unmodified _SQFTDGQQLY_ ENSG00000066136|ENST00000447388|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC 59.36838082759317 0.0382430275470746 5 {[QS]|[NT]}{M(Oxidation (M))|F}TDGQQ{I|L}Y 10 0 + 59.103 0.0 0.0 4.9854 4.9854 80.315 0.0 0.0 0.0 2.5106768722152566 11.075294822072031 2.5106768722152566 2.5106768722152566 0 0.8935078169319297 0.638272163982407 1.703119819790884 0.5941876774005249 + + {[QS]|[NT]}{M(Oxidation (M))|F}TDGQQ{I|L}Y;[AG]S{M(Oxidation (M))|F}TDGQQ{I|L}Y;{[QS]|[NT]}{M(Oxidation (M))|F}TE[NG]Q{I|L}Y;{[QS]|[NT]}{[DA]|[EG]}Q{M(Oxidation (M))|F}SQ{I|L}Y;[AG]S{M(Oxidation (M))|F}TE[NG]Q{I|L}Y;[AG]S{[DA]|[EG]}Q{M(Oxidation (M))|F}SQ{I|L}Y;[AG]GDTQ{M(Oxidation (M))|F}SQ{I|L}Y;{[QS]|[NT]}{M(Oxidation (M))|F}TDGQ[AG]{I|L}Y;{[QS]|[NT]}{M(Oxidation (M))|F}TDG[AG]Q{I|L}Y;{[QS]|[NT]}{M(Oxidation (M))|F}{[DA]|[EG]}QSQ{I|L}Y 4.9854;4.7736;4.7497;4.5453;4.3357;4.3336;4.3152;4.2123;4.2123;4.2093 +;-;-;-;-;-;-;-;-;- + 2818 1 2.186 112576.7 0.5600000023841858 2903 4231 7126 SUDHL4_400M_050219_1,7136 SUDHL4_400M_050219_1,7136,SQFTDGQQLY True True SQFTDGQQLY 37.764676 593.773181140423 980965.125 7126.0 nc|ENSG00000066136|Q13952-5|NFYC;;ENSG00000066136|ENST00000447388|NFYC;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC 6.664158662160237 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7137 37.775 578.0 176840.0 25 0 7146.9 + 45645 YVPETVYRV 9 127 563.3000391214504 1124.5855253097006 2 563.3024169802666 MULTI CID FTMS 0 0 0 7126 89336.7421875 1.0 0 0.0 11 Unmodified _YVPETVYRV_ ENSG00000082701|ENST00000264235|GSK3B;ENSG00000105723|ENST00000222330|GSK3A;nc|ENSG00000082701|P49841-2|GSK3B 29.081581746732265 0.1611639662936252 5 [YV]PETVRVY 9 2 + 55.467 0.0 0.0 4.9322 4.9322 82.568 0.0 0.0 0.0 31.039723343538583 3.4106167695861345 3.4106167695861345 4.771212547196619 0 0.6237125054200234 2.0 0.7302046884880937 0.0 [YV]PETVRVY;[YV]PEVTRVY;[YV]PET{I|L}{I|L}QY;[EP]T[{I|L}P]VEPP{M(Oxidation (M))|F};[EP][{I|L}P]VTEPP{M(Oxidation (M))|F};[YV]PETV[{I|L}T]G{M(Oxidation (M))|F};[YV]PET[YQ]{I|L}{I|L};[YV]PET{I|L}{I|L}SG{M(Oxidation (M))|F};[EP][{I|L}P]TVEPP{M(Oxidation (M))|F};[YV]PET{I|L}{I|L}[AG]Y 4.9322;4.508;4.4207;4.0988;4.0948;3.9938;3.8309;3.7262;3.6706;3.6019 -;-;-;-;-;-;-;-;-;- 547 + 1 2.186 84209.0 1.0 2904 4231 7126 SUDHL4_400M_050219_1,7137 SUDHL4_400M_050219_1,7137,YVPETVYRV False True YVPETVYRV 37.774803 563.302416980267 586846.375 7126.0 nc|ENSG00000082701|P49841-2|GSK3B;;ENSG00000082701|ENST00000264235|GSK3B;;ENSG00000105723|ENST00000222330|GSK3A 6.524345874786377 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7138 37.79 800.0 172070.0 25 0 11554.0 + 40740 VLIGSEHGL 9 153 462.7602990754156 923.5060452176313 2 462.7606384158134 MULTI CID FTMS 0 0 0 7126 90637.8203125 1.0 0 0.0 12 Unmodified _VLIGSEHGL_ ENSG00000070061|ENST00000374647|ELP1 38.15118350030904 0.0856056900103839 5 [{I|L}V]{I|L}G{[ES]|[DT]|[{I|L}C]}[HA]V 9 2 + 37.354 0.0 0.0 4.0448 4.0448 81.089 0.0 0.0 0.0 13.920817617632087 0.7995308169778141 0.7995308169778141 6.165055005395182 0 0.4247425010840047 2.0 1.3494850021680094 0.0 [{I|L}V]{I|L}G{[ES]|[DT]|[{I|L}C]}[HA]V;[{I|L}V]SY[KC]{I|L}V;{[TV]|[{I|L}S]}A[HD]G{I|L}{I|L}V;{[TV]|[{I|L}S]}VY[KC]{I|L}V;{[VA]|[{I|L}G]}T[HD]G{I|L}{I|L}V;{[YC]|[HE]}[SG]{I|L}G{I|L}{I|L}V;[{M(Oxidation (M))|F}V][YN]G{I|L}{I|L}V;[VS]{I|L}Y[KC]{I|L}V;{[TV]|[{I|L}S]}A[HS][TP]{I|L}V 4.0448;3.3772;2.504;1.7301;0.91132;0.61478;0.3442;0.3442;0.042747 -;-;-;-;-;-;-;-;- 176 + 1 2.186 106085.4 0.4000000059604645 2905 4231 7126 SUDHL4_400M_050219_1,7138 SUDHL4_400M_050219_1,7138,VLIGSEHGL True True VLIGSEHGL 37.790082 462.760638415813 513455.6875 7126.0 ENSG00000070061|ENST00000374647|ELP1 1.9056150515874224 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7139 37.795 281.0 226960.0 25 0 65422.0 + + 29699 ASSYIAHL 8 73 430.8882837599263 0 430.8883239626884 PEAK CID FTMS 0 0 0 7126 173148.734375 0.4160599894287191 80 -4.4568939208984375 13 Unmodified _QPFSLQYSHAL_ ENSG00000125878|ENST00000246080|TCF15;ENSG00000118526|ENST00000367882|TCF21;ENSG00000178860|ENST00000325509|MSC 3.5964929083625545 0.4761840153648598 5 S 1 -1 6.9897 0.0 0.0 0.81298 0.0 0.0 157.39282620950263 612.3184908502561 769.7113170597588 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.81298 + + 19 + 1 2.186 60404.3 1.0 2906 4231 7126 SUDHL4_400M_050219_1,7139 SUDHL4_400M_050219_1,7139,QPFSLQYSHAL False False ASSYIAHL 37.795252 430.888323962688 524979.6875 7126.0 ENSG00000125878|ENST00000246080|TCF15;;ENSG00000118526|ENST00000367882|TCF21;;ENSG00000178860|ENST00000325509|MSC 4.426790555318196 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7141 37.804 256.0 239530.0 25 0 27934.0 + 20832 LLYQGPHNTL 10 93 578.3118263486897 1154.6090997641793 2 578.3119384646416 MULTI CID FTMS 0 0 0 7140 172833.53125 0.2925319905368689 1 -0.0658607482910156 1 Unmodified _LLYQGPHNTL_ ENSG00000115232|ENST00000397033|ITGA4;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;nc|ENSG00000115232|P13612-2|ITGA4 38.17557092003332 0.1768326257063233 5 {I|L}{I|L}[YQ]G 5 5 51.382 0.0 0.0 4.4502 0.0 0.0 0.0 577.2748507135374 577.2748507135374 26.24598048369577 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.3494850021680094 + {I|L}{I|L}[YQ]G 4.4502 + + 308 + 1 2.204 47353.6 1.0 2907 4232 7140 SUDHL4_400M_050219_1,7141 SUDHL4_400M_050219_1,7141,LLYQGPHNTL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7142 37.808 242.0 222260.0 25 0 30995.0 20651 LLQERPAL 8 87 470.2846241624547 938.5546953917094 2 470.2852355837822 MULTI CID FTMS 0 0 0 7140 89951.7890625 0.2389378079270092 2 -0.0728874206542968 2 Unmodified _LLQERPAL_ ENST00000508906.6_3_6:26370772-26373254:+|nuORF;ENST00000604202.1_1_6:26373056-26373254:+|nuORF 20.871210003555333 0.6025813472596342 5 ST 2 8 20.573 0.0 0.0 2.192 0.0 0.0 299.1833902547052 448.28122888736567 747.4646191420709 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 ST 2.192 - 75 + 1 2.204 45712.1 1.0 2908 4232 7140 SUDHL4_400M_050219_1,7142 SUDHL4_400M_050219_1,7142,LLQERPAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7143 37.811 112.0 449030.0 25 0 49928.0 + + 19127 RLIEESVTV 9 60 523.2979114704563 1044.5812700077124 2 523.2977783083916 MULTI CID FTMS 0 0 0 7140 357228.78125 0.3344192560636984 -2 0.1638069152832031 3 Unmodified _LDWVITVTV_ nc|ENSG00000030066|Q12769|NUP160;nc|ENSG00000030066|Q12769-3|NUP160;ENSG00000030066|ENST00000378460|NUP160 28.486842064014134 0.1687311288560894 5 EESVTV 6 -1 53.933 0.0 0.0 5.1631 0.0 0.0 382.26988417793126 0.0 382.26988417793126 0.0 46.48570980063916 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 EESVTV 5.1631 - 41 1 2.204 44975.0 1.0 2909 4232 7140 SUDHL4_400M_050219_1,7143 SUDHL4_400M_050219_1,7143,LDWVITVTV False False RLIEESVTV 37.810879 523.297778308392 9265907.0 7140.0 nc|ENSG00000030066|Q12769|NUP160;;nc|ENSG00000030066|Q12769-3|NUP160;;ENSG00000030066|ENST00000378460|NUP160 4.38581641515096 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7144 37.815 198.0 308130.0 25 0 18401.0 + 2057 APLPPHLPGA 10 89 485.2792959137977 968.5440388943954 2 485.2791320681572 MULTI CID FTMS 0 0 0 7140 109487.3828125 0.3816181176652039 41 -2.203678131103516 4 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 32.116972079565 0.2470863257317063 5 [PA]{I|L}[Y{I|L}]PA 7 4 35.45 0.0 0.0 3.6601 0.0 0.0 0.0 240.09986099816413 240.09986099816413 23.856150930823148 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 [PA]{I|L}[Y{I|L}]PA 3.6601 - 101 1 2.204 51455.2 1.0 2910 4232 7140 SUDHL4_400M_050219_1,7144 SUDHL4_400M_050219_1,7144,APLPPHLPGA False True False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 7145 37.821 376.0 188760.0 25 0 13080.0 + -1 ALYDEVRTV 9 99 533.2794161894799 1064.5442794457597 2 533.2785522341728 MULTI CID FTMS 0 0 0 7140 131131.578125 1.0 0 0.0 5 Oxidation (M) _LAM(Oxidation (M))LSTEVSV_ ENSG00000101596|ENST00000320876|SMCHD1;ENST00000577300.1_1_18:2703698-2706469:+|nuORF;nc|ENSG00000101596|A6NHR9-2|SMCHD1 32.30548876998284 0.2428506522065767 5 [{I|L}A]YDE[R{I|L}]SV 9 -1 + 61.321 0.0 0.0 5.7603 5.7603 92.943 0.0 0.0 0.0 42.77696854845523 8.657424843733637 8.657424843733637 38.460696996448576 0 0.5 2.0 0.6989700043360187 0.0 [{I|L}A]YDE[R{I|L}]SV;[{I|L}A]YW[{M(Oxidation (M))|F}T][HK];[{I|L}A]Y[KG][R{M(Oxidation (M))|F}][NP];{[YD]|[{M(Oxidation (M))|F}M]}[RV][{M(Oxidation (M))|F}T][HK];{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))K]{[YC]|[HE]}[HK] 5.7603;2.1474;1.7727;0.74835;0.50276 -;-;-;-;- 101 + 1 2.204 60623.4 1.0 2911 4232 7140 SUDHL4_400M_050219_1,7145 SUDHL4_400M_050219_1,7145,LAMLSTEVSV False False ALYDEVRTV 37.821423 533.278552234173 749426.1875 7140.0 ENSG00000101596|ENST00000320876|SMCHD1;;ENST00000577300.1_1_18:2703698-2706469:+|nuORF;;nc|ENSG00000101596|A6NHR9-2|SMCHD1 6.074799060821533 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7146 37.835 800.0 146060.0 25 0 17147.0 -1 0 131 881.9123726664106 1761.8101923996212 2 882.4158203005791 MULTI CID FTMS 0 0 0 7140 100557.7890625 0.4686345311720278 16 -0.8592872619628906 6 5 {[QN]|[E{I|L}]|[KN]}VRPS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SN{[QV]|[N{I|L}]|[RA]|[KV]}P{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 38.991 0.0 0.0 2.2131 2.2131 74.89 0.0 0.0 0.0 3.256434167410731 18.66858505388154 3.256434167410731 3.0102999566398125 0 0.5 0.0 0.3054621874040891 0.2396518287104437 {[QN]|[E{I|L}]|[KN]}VRPS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SN{[QV]|[N{I|L}]|[RA]|[KV]}P{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}VRPS[Y{M(Oxidation (M))|F}]AN{[QV]|[N{I|L}]|[RA]|[KV]}P{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}VR[HN]QDAN{[QV]|[N{I|L}]|[RA]|[KV]}P{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}VRP[HM]EAN{[QV]|[N{I|L}]|[RA]|[KV]}P{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}VN[RH]QDAN{[QV]|[N{I|L}]|[RA]|[KV]}P{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAN{[QV]|[N{I|L}]|[RA]|[KV]}P{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}VRPS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}S[RH]E{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}VRA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAN{[QV]|[N{I|L}]|[RA]|[KV]}P{[QD]|[EN]|[WG]|[KD]|[RS]};{[QN]|[E{I|L}]|[KN]}VN{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAN{[QV]|[N{I|L}]|[RA]|[KV]}P{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAN{[QV]|[N{I|L}]|[RA]|[KV]}P{[QD]|[EN]|[WG]|[KD]|[RS]} 2.2131;2.0422;1.5981;1.5626;1.4758;1.4653;1.4496;1.4167;1.2944;1.2807 -;-;-;-;-;-;-;-;-;- 2199 1 2.204 80104.2 0.5899999737739563 2912 4232 7140 SUDHL4_400M_050219_1,7146 SUDHL4_400M_050219_1,7146, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7147 37.839 221.0 331110.0 25 0 46414.0 -1 0 102 473.2855856706065 472.27830920400646 1 473.2854492068291 MULTI CID FTMS 0 0 0 7140 175030.578125 1.0 0 0.0 7 5 [{I|L}A]{M(Oxidation (M))|F} 3 -1 25.686 0.0 0.0 5.4388 0.0 0.0 0.0 138.05718428629083 138.05718428629083 10.165893509600748 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]{M(Oxidation (M))|F} 5.4388 - 80 1 2.204 60901.3 1.0 2913 4232 7140 SUDHL4_400M_050219_1,7147 SUDHL4_400M_050219_1,7147, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7148 37.853 800.0 106660.0 25 0 16728.0 -1 0 66 1191.1538488169492 3570.439717051048 3 1191.485766589642 MULTI CID FTMS 0 0 0 7140 171220.875 0.2288502628633636 2 -0.0728874206542968 8 5 {I|L}TTTPE 6 -1 23.057 0.0 0.0 0.64577 0.0 0.0 2400.914959135036 524.1626680963499 2925.077627231386 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7887254899964358 0.0 {I|L}TTTPE 0.64577 - 378 + 1 2.204 74405.5 0.5600000023841858 2914 4232 7140 SUDHL4_400M_050219_1,7148 SUDHL4_400M_050219_1,7148, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7149 37.861 438.0 196570.0 25 0 16881.0 -1 0 130 588.3226714645674 587.3153949979674 1 588.3232299685478 MULTI CID FTMS 0 0 0 7140 144144.234375 0.6612998183746998 -2 0.1638069152832031 9 5 [RV]WQ 4 -1 + 12.054 0.0 0.0 2.0525 2.0525 74.19 0.0 0.0 0.0 1.5507929543124703 1.6757975501651536 1.5507929543124703 2.5222782903050582 0 0.0 0.0 0.0 0.1171302707394362 [RV]WQ;[C(Carbamidomethyl (C))K][{I|L}P]A 2.0525;1.623 -;- 39 + 1 2.204 75036.7 1.0 2915 4232 7140 SUDHL4_400M_050219_1,7149 SUDHL4_400M_050219_1,7149, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7151 37.867 87.0 618000.0 25 0 49932.0 -1 YLFYCKNCRFY 11 65 788.855031529977 1575.695510126754 2 788.8556396365166 MULTI CID FTMS 0 0 0 7150 542014.8125 0.6304449175075337 1 -0.0070266723632812 1 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 3.2813086475875832 0.8596665074481906 5 {[QG]|[NA]}{M(Oxidation (M))|F}[CS]{[NV]|[RG]}AQQNA[Y{M(Oxidation (M))|F}] 14 -1 + 54.235 0.0 0.0 3.442 3.442 77.543 0.0 0.0 0.0 4.454321750294668 26.03363519713283 4.454321750294668 3.6575532530063626 0 0.5 0.0 0.3807196863200844 1.579689690656103 {[QG]|[NA]}{M(Oxidation (M))|F}[CS]{[NV]|[RG]}AQQNA[Y{M(Oxidation (M))|F}];{[QG]|[NA]}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}[MT]QQNA[Y{M(Oxidation (M))|F}] 3.442;3.2099 -;- 474 1 2.226 47849.9 1.0 2916 4233 7150 SUDHL4_400M_050219_1,7151 SUDHL4_400M_050219_1,7151,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7152 37.868 36.0 1485400.0 25 0 223310.0 + 19649 LGGSVELVRA 10 70 500.79355956722486 999.5725662012496 2 500.7929870486259 MULTI CID FTMS 0 0 0 7150 104452.828125 0.1044452623713069 2 -0.1077842712402343 2 Unmodified _LGGSVELVRA_ REV__ENST00000424989.1_1_1:37921191-37921512:-|nuORF 24.020572477871973 0.4289996903560794 5 NEE{I|L}ARV 7 -1 46.089 0.0 0.0 4.6108 0.0 0.0 170.14536417992937 0.0 170.14536417992937 0.0 31.3836774947141 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.6989700043360187 NEE{I|L}ARV 4.6108 - 226 + 1 2.226 47243.1 1.0 2917 4233 7150 SUDHL4_400M_050219_1,7152 SUDHL4_400M_050219_1,7152,LGGSVELVRA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7154 37.873 33.0 1707700.0 25 0 247510.0 + 11813 GLNEEIARV 9 83 500.7748083907432 999.5350638482864 2 500.7748596072197 MULTI CID FTMS 0 0 0 7153 1513534.0 0.2898841514117002 -1 0.0070266723632812 1 Unmodified _GLNEEIARV_ ENSG00000080986|ENST00000261597|NDC80 56.17704186161178 0.0281986971544335 5 {[VA]|[{I|L}G]}NEE{I|L}ARV 9 0 + 85.116 0.0 0.0 8.5156 8.5156 94.685 0.0 0.0 0.0 68.86168767277148 11.706962271689749 11.706962271689749 9.208187539523747 0 0.805462187404089 2.0 0.7742275032520141 0.4247425010840047 + + {[VA]|[{I|L}G]}NEE{I|L}ARV;{[VA]|[{I|L}G]}GGEE{I|L}ARV;{[VA]|[{I|L}G]}NEV[DV]RV;{[VA]|[{I|L}G]}GGEV[DV]RV;{[VA]|[{I|L}G]}{[DA]|[EG]}[{I|L}V]ERQ;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[{I|L}V]ERQ 8.5156;7.5943;6.6396;5.7184;1.6119;0.66398 +;-;-;-;-;- + 152 + 1 2.226 49690.6 1.0 2918 4234 7153 SUDHL4_400M_050219_1,7154 SUDHL4_400M_050219_1,7154,GLNEEIARV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7155 37.874 59.0 1174400.0 25 0 112080.0 + 1747 ALQPEPIKV 9 92 497.8004090459922 993.5862651587844 2 497.8004333376884 MULTI CID FTMS 0 0 0 7153 953053.8125 0.6072545861101543 2 -0.2057952880859375 2 Unmodified _ALQPEPIKV_ ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF 30.63653989081413 0.1413794767160703 5 [{I|L}A]Q 3 6 30.942 0.0 0.0 3.1142 0.0 0.0 0.0 678.3837864813032 678.3837864813032 4.888924961145513 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + [{I|L}A]Q 3.1142 + + 143 1 2.226 56394.8 1.0 2919 4234 7153 SUDHL4_400M_050219_1,7155 SUDHL4_400M_050219_1,7155,ALQPEPIKV False True ALQPEPIKV 37.874385 497.800433337688 18321672.0 7153.0 ENST00000532451.1_1_11:121323091-121416136:+|nuORF;;ENSG00000137642|ENST00000260197|SORL1 7.5155355135599775 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7156 37.876 69.0 766080.0 25 0 109030.0 -1 0 84 412.2281995384317 411.22092307183175 1 412.2304565310478 MULTI CID FTMS 0 0 0 7153 407066.0 0.395745694411363 -5 0.2734756469726562 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.226 51505.4 1.0 2920 4234 7153 SUDHL4_400M_050219_1,7156 SUDHL4_400M_050219_1,7156, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7157 37.879 134.0 357080.0 25 0 59929.0 + 11795 GLLQSFCHQ 9 77 516.7498079052478 1031.4850628772956 2 516.7504760622978 MULTI CID FTMS 0 0 0 7153 262311.15625 1.0 0 0.0 4 Unmodified _GLLQSFCHQ_ REV__ENST00000344120.4_1_5:141691164-141691335:-|nuORF 19.256988751693697 0.3154191944385105 5 {[VA]|[{I|L}G]}{I|L} 3 -1 31.879 0.0 0.0 3.0906 0.0 0.0 0.0 745.2724093072874 745.2724093072874 21.041710058740463 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L} 3.0906 + + 44 + 1 2.226 42438.6 1.0 2921 4234 7153 SUDHL4_400M_050219_1,7157 SUDHL4_400M_050219_1,7157,GLLQSFCHQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7158 37.883 214.0 363350.0 25 0 46626.0 + 27721 PLLPTTAQ 8 121 420.7434663776574 0 420.7435180544853 PEAK CID FTMS 0 0 0 7153 230124.375 0.5175919538270737 -5 0.2734756469726562 5 Unmodified _PLLPTTAQ_ REV__ENSG00000122367|ENST00000361373|LDB3 2.302733041254933 0.5920993303473642 5 A 1 -1 1.9897 0.0 0.0 0.23702 0.0 0.0 530.2971001363711 235.11873804263908 765.4158381790102 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.23702 + + 4 + 1 2.226 64324.4 1.0 2922 4234 7153 SUDHL4_400M_050219_1,7158 SUDHL4_400M_050219_1,7158,PLLPTTAQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7159 37.89 405.0 291260.0 25 0 21154.0 + 31288 RLYEDSGYSSF 11 113 662.2966289886165 1322.5787050440329 2 662.2973510622978 MULTI CID FTMS 0 0 0 7153 200496.03125 1.0 0 0.0 6 Unmodified _RLYEDSGYSSF_ ENSG00000112029|ENST00000229758|FBXO5;nc|ENSG00000112029|Q9UKT4-2|FBXO5 73.1962812333195 0.0231417158388345 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]{NN|[MP]|[D{I|L}]|[EV]}SGYSS{M(Oxidation (M))|F} 12 4 + 89.364 0.0 0.0 6.7568 6.7568 89.247 0.0 0.0 0.0 1.1954370472159326 39.19414855534957 1.1954370472159326 6.611814434466183 0 1.424742501084005 1.3979400086720375 2.004432191740108 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]{NN|[MP]|[D{I|L}]|[EV]}SGYSS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T][WE]GYSS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[NS][Q{I|L}]GYSS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}VV{NN|[MP]|[D{I|L}]|[EV]}SGYSS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]WWYSS{M(Oxidation (M))|F};{[CA]|SS}{M(Oxidation (M))|F}[NS][Q{I|L}]GYSS{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[SG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SGYSS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}VV[WE]GYSS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}A[NS][Q{I|L}]GYSS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}G{[QS]|[NT]}[Q{I|L}]GYSS{M(Oxidation (M))|F} 6.7568;6.2569;6.2244;5.585;5.4385;5.3747;5.1501;5.085;5.0526;4.755 -;-;-;-;-;-;-;-;-;- 1146 1 2.226 90924.3 1.0 2923 4234 7153 SUDHL4_400M_050219_1,7159 SUDHL4_400M_050219_1,7159,RLYEDSGYSSF True True RLYEDSGYSSF 37.890073 662.297351062298 1279153.125 7153.0 ENSG00000112029|ENST00000229758|FBXO5;;nc|ENSG00000112029|Q9UKT4-2|FBXO5 8.483285427093506 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7160 37.897 388.0 284250.0 25 0 38459.0 41091 VNKDKGRP 8 121 457.2642548034081 912.513956673616 2 457.2649413943291 MULTI CID FTMS 0 0 0 7153 195383.28125 0.5218817966129538 -5 0.2734756469726562 7 Unmodified _VNKDKGRP_ ENSG00000165138|ENST00000353234|ANKS6;nc|ENSG00000165138|Q68DC2-4|ANKS6 7.910154910731844 0.7763180056447161 5 {I|L} 1 8 10.379 0.0 0.0 1.1374 0.0 0.0 781.418892441974 0.0 781.418892441974 0.0 1.170416030166841 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1374 - 32 + 1 2.226 89133.7 1.0 2924 4234 7153 SUDHL4_400M_050219_1,7160 SUDHL4_400M_050219_1,7160,VNKDKGRP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7161 37.902 253.0 236630.0 25 0 23640.0 27466 PKEVLSLS 8 117 436.7564890337417 871.4984251342834 2 436.7564575076103 MULTI CID FTMS 0 0 0 7153 178864.640625 0.5257733421885894 -8 0.3951301574707031 8 Unmodified _PKEVLSLS_ ENSG00000121753|ENST00000373658|ADGRB2;nc|ENSG00000121753|O60241-2|ADGRB2;nc|ENSG00000121753|O60241-3|ADGRB2;nc|ENSG00000121753|O60241-4|ADGRB2 4.75600775471527 0.7954636275367004 5 V 1 7 8.5387 0.0 0.0 0.97977 0.0 0.0 754.419298707817 0.0 754.419298707817 0.0 1.5000655322351255 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.97977 + + 27 + 1 2.226 51886.0 1.0 2925 4234 7153 SUDHL4_400M_050219_1,7161 SUDHL4_400M_050219_1,7161,PKEVLSLS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7162 37.906 207.0 189520.0 25 0 16895.0 + 19643 LGGAEAKWLA 10 77 508.280220986848 1014.545889040496 2 508.2802612185478 MULTI CID FTMS 0 0 0 7153 164709.171875 0.191066801287599 3 -0.2865638732910156 9 Unmodified _LGGAEAKWLA_ REV__AluJb_dup83104|chr12:47217123-47217390:+|2.087559342868773|0.1567787654372586|3.74|48.0|4|2|sense;REV__AluSz6_dup18929|chr7:74907452-74907724:+|1.3062487732717305|0.4815132511268067|1.44|48.0|6|2|sense;REV__nc|nan|Q9NRJ1|C8orf17 18.1463463914782 0.5430639438673815 5 {[QV]|[N{I|L}]|[RA]|[KV]}AE 4 -1 45.445 0.0 0.0 4.4794 0.0 0.0 0.0 584.3139313219566 584.3139313219566 34.47621246364342 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}AE 4.4794 - 42 + 1 2.226 36446.6 1.0 2926 4234 7153 SUDHL4_400M_050219_1,7162 SUDHL4_400M_050219_1,7162,LGGAEAKWLA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7163 37.912 343.0 308560.0 25 0 25727.0 -1 VVLMEPTF 8 142 476.2454710819629 0 476.2434570193291 PEAK CID FTMS 0 0 0 7153 138762.03125 0.880904586764108 1 -0.1007575988769531 10 Oxidation (M) _VVLM(Oxidation (M))EPTF_ ENSG00000131379|ENST00000253697|C3orf20 11.114462752807354 0.5290325060821968 5 V 1 -1 6.9897 0.0 0.0 0.73539 0.0 0.0 780.3344042227164 68.05121027164296 848.3856144943594 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.73539 + + 79 + 1 2.226 85038.1 1.0 2927 4234 7153 SUDHL4_400M_050219_1,7163 SUDHL4_400M_050219_1,7163,VVLMEPTF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7164 37.92 446.0 237520.0 25 0 24009.0 + -1 GMWHERYPL 9 121 602.7801625941473 1203.5457722550946 2 602.7806274294853 MULTI CID FTMS 0 0 0 7153 119345.9921875 0.6105173993790233 -1 0.0070266723632812 11 Oxidation (M) _GM(Oxidation (M))WHERYPL_ REV__ENST00000342988.7_1_18:48573606-48575086:+|nuORF 13.90604991867851 0.4602628045680013 5 DYP{I|L} 4 -1 39.602 0.0 0.0 3.2904 0.0 0.0 697.3083363263687 0.0 697.3083363263687 0.0 26.73951984600532 0.0 0.0 0 1.0189301784845295 0.0 0.3494850021680094 0.0 DYP{I|L} 3.2904 - 319 1 2.226 79486.7 1.0 2928 4234 7153 SUDHL4_400M_050219_1,7164 SUDHL4_400M_050219_1,7164,GMWHERYPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7165 37.925 258.0 209000.0 25 0 22068.0 + 1515 ALIEGGMKY 9 93 491.2576324919011 980.5007120506024 2 491.2578002810478 MULTI CID FTMS 0 0 0 7153 105980.421875 0.7295057750123713 1 -0.1007575988769531 12 Unmodified _ALIEGGMKY_ ENSG00000112245|ENST00000626021|PTP4A1 25.399314129420983 0.2080152500878129 5 [{I|L}A]{I|L}E[MN]KY 8 2 + 51.999 0.0 0.0 5.3034 5.3034 86.105 0.0 0.0 0.0 40.57943335784019 7.746907182741367 7.746907182741367 8.08114473761087 0 0.805462187404089 2.0 0.0 0.0 [{I|L}A]{I|L}E[MN]KY;[{I|L}A]{I|L}E[C(Carbamidomethyl (C))K]T{M(Oxidation (M))|F};[{I|L}A][WH]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VP;[{I|L}A][WH]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}PV 5.3034;4.4792;1.2453;1.1788 -;-;-;- 118 + 1 2.226 46901.3 1.0 2929 4234 7153 SUDHL4_400M_050219_1,7165 SUDHL4_400M_050219_1,7165,ALIEGGMKY False True ALIEGGMKY 37.924556 491.257800281048 499446.875 7153.0 ENSG00000112245|ENST00000626021|PTP4A1 5.540564854939778 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7166 37.931 338.0 238490.0 25 0 16172.0 + 37990 TGGSVARATPMEF 13 128 448.2308603097964 894.4471676863928 2 448.2312499880791 MULTI CID FTMS 0 0 0 7153 94813.1171875 0.8749812366196009 1 -0.1007575988769531 13 Unmodified _TNLTKGDF_ nc|ENSG00000106948|Q7Z591-6|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA;nc|ENSG00000106948|Q7Z591-2|AKNA;ENSG00000106948|ENST00000374088|AKNA;nc|ENSG00000106948|Q7Z591-3|AKNA 12.531546534597751 0.7257836412119636 5 {M(Oxidation (M))|F} 1 7 14.604 0.0 0.0 1.6328 0.0 0.0 729.3679878541648 0.0 729.3679878541648 0.0 -7.860075641309052 -7.860075641309052 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.6328 + + 105 + 1 2.226 64363.4 1.0 2930 4234 7153 SUDHL4_400M_050219_1,7166 SUDHL4_400M_050219_1,7166,TNLTKGDF False False TGGSVARATPMEF 37.930673 448.231249988079 560319.8125 7153.0 nc|ENSG00000106948|Q7Z591-6|AKNA;;nc|ENSG00000106948|Q7Z591-7|AKNA;;nc|ENSG00000106948|Q7Z591-2|AKNA;;ENSG00000106948|ENST00000374088|AKNA;;nc|ENSG00000106948|Q7Z591-3|AKNA 0.8903822799523672 3.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7167 37.941 530.0 207950.0 25 0 22252.0 + 17776 KQFPEVIKY 9 144 576.32566813439 0 576.3264037966728 PEAK CID FTMS 0 0 0 7153 85595.5390625 0.713029701140329 -7 0.3532142639160156 14 Unmodified _KQFPEVIKY_ ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A 32.78568957990786 0.0971838787772021 5 {I|L}YQKYK 6 8 30.838 0.0 0.0 2.6801 0.0 0.0 146.10579075921106 178.0513094537719 324.157100212983 0.0 0.0 0.0 0.0 0 0.5941876774005248 0.0 0.0 0.5994850021680094 {I|L}YQKYK 2.6801 - 941 + 1 2.226 86268.0 1.0 2931 4234 7153 SUDHL4_400M_050219_1,7167 SUDHL4_400M_050219_1,7167,KQFPEVIKY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7168 37.955 800.0 49469.0 25 0 10816.0 -1 0 39 1081.1302172679543 3240.3688224040634 3 1081.798266589642 MULTI CID FTMS 0 0 0 7153 115207.7734375 1.0 0 0.0 15 5 C 1 -1 6.9897 0.0 0.0 0.21571 0.0 0.0 2159.800415276913 974.525586921284 3134.326002198197 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.21571 - 5 + 1 2.226 42734.6 0.4799999892711639 2932 4234 7153 SUDHL4_400M_050219_1,7168 SUDHL4_400M_050219_1,7168, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7169 37.969 800.0 30669.0 25 0 3869.9 -1 0 47 807.0545665218101 2418.1418701656303 3 807.3927490115166 MULTI CID FTMS 0 0 0 7153 106587.390625 1.0 0 0.0 16 5 {I|L} 1 -1 6.9897 0.0 0.0 0.28905 0.0 0.0 1288.5988912953162 1013.4439581236136 2302.0428494189296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.28905 - 5 + 1 2.226 31251.2 0.550000011920929 2933 4234 7153 SUDHL4_400M_050219_1,7169 SUDHL4_400M_050219_1,7169, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7171 37.975 77.0 440450.0 25 0 45031.0 + 26238 NQKDGMVSF 9 61 513.2397399205295 1024.4649269078589 2 513.2399780154228 MULTI CID FTMS 0 0 0 7170 438749.03125 0.2939275481229963 1 -0.1050376892089843 1 Unmodified _NQKDGMVSF_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 22.736283301280096 0.2418982879461534 5 {[QN]|[E{I|L}]|[KN]}[RD]C(Carbamidomethyl (C))VS{M(Oxidation (M))|F} 8 3 {[QN]|[E{I|L}]|[KN]}[RD]C(Carbamidomethyl (C))V + + 29.024 13.473 1.7444 2.8331 2.8331 53.872 0.0 0.0 0.0 0.0 8.561062652429925 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 {[QN]|[E{I|L}]|[KN]}[RD]C(Carbamidomethyl (C))VS{M(Oxidation (M))|F} 2.8331 - 44 + 1 2.239 35342.6 1.0 2934 4235 7170 SUDHL4_400M_050219_1,7171 SUDHL4_400M_050219_1,7171,NQKDGMVSF False True NQKDGMVSF 37.974535 513.239978015423 17528142.0 7170.0 nc|ENSG00000141030|Q9UNS2-2|COPS3;;ENSG00000141030|ENST00000268717|COPS3 6.254721005757649 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7172 37.988 800.0 183970.0 25 0 10923.0 -1 FYEWECKQRMR 11 133 824.8716287557273 1647.7287045782546 2 824.8713867068291 MULTI CID FTMS 0 0 0 7170 93289.9140625 0.1178990302214487 4 -0.3215370178222656 2 Carbamidomethyl (C),Oxidation (M) _FYEWEC(Carbamidomethyl (C))KQRM(Oxidation (M))R_ ENSG00000120658|ENST00000690772|ENOX1;nc|ENSG00000120658|Q8TC92-2|ENOX1 0.3506318815782774 0.8734936314171269 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YVQ 14 -1 + 60.76 0.0 0.0 3.6875 3.6875 55.482 0.0 0.0 0.0 0.0 8.054169578177337 0.0 0.0 0 0.7346368802282017 0.0 0.0 1.2302046884880935 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YVQ;[YQ]V[CS]AQQNA{M(Oxidation (M))|F}YVQ;{NN|[MP]|[D{I|L}]|[EV]}YMEQQNA{M(Oxidation (M))|F}YVQ;{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};[YQ]V[CS]AQQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQGGA{M(Oxidation (M))|F}YVQ;[YQ]V[CS]AQQGGA{M(Oxidation (M))|F}YVQ;{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]NA{M(Oxidation (M))|F}YVQ;{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QNA{M(Oxidation (M))|F}YVQ;[YQ]V[CS]A[AG]QNA{M(Oxidation (M))|F}YVQ 3.6875;3.6875;3.6279;3.1832;3.1832;3.1383;3.1383;3.1383;3.1383;3.1383 -;-;-;-;-;-;-;-;-;- 1279 1 2.239 105755.7 0.949999988079071 2935 4235 7170 SUDHL4_400M_050219_1,7172 SUDHL4_400M_050219_1,7172,FYEWECKQRMR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7173 37.991 108.0 539660.0 25 0 65170.0 + 36930 TEVGEKIAL 9 87 480.2745606955318 0 480.2745239138603 PEAK CID FTMS 0 0 0 7170 499700.59375 0.984240379302392 -1 0.1007575988769531 3 Unmodified _TEVGEKIAL_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;ENST00000460032.1_1_X:24091216-24091381:+|nuORF 30.63653989081413 0.1077493867305487 5 AV{I|L}GEG 6 7 33.665 0.0 0.0 3.5121 0.0 0.0 361.1865196626688 68.05127130679921 429.237790969468 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0044321917401078 0.0 AV{I|L}GEG 3.5121 - 109 + 1 2.239 49260.2 1.0 2936 4235 7170 SUDHL4_400M_050219_1,7173 SUDHL4_400M_050219_1,7173,TEVGEKIAL True True TEVGEKIAL 37.99066 480.27452391386 3191784.25 7170.0 ENST00000460032.1_1_X:24091216-24091381:+|nuORF;;ENSG00000180574|ENST00000538173|EIF2S3B;;ENSG00000130741|ENST00000253039|EIF2S3 1.314920075237751 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7174 37.994 150.0 578990.0 25 0 69270.0 + 18616 LAEVGRVL 8 97 428.76635684919006 855.5181607651801 2 428.7662536501884 MULTI CID FTMS 0 0 0 7170 404181.59375 1.0 0 0.0 4 Unmodified _LAEVGRVL_ ENSG00000010165|ENST00000361735|METTL13;nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-2|METTL13;nc|ENSG00000010165|Q8N6R0-3|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13 26.88365393820708 0.4786498634179528 5 {I|L}AEV 4 4 59.553 0.0 0.0 6.961 0.0 0.0 0.0 440.262837808572 440.262837808572 49.17399041687222 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 + {I|L}AEV 6.961 + + 42 + 1 2.239 71757.7 1.0 2937 4235 7170 SUDHL4_400M_050219_1,7174 SUDHL4_400M_050219_1,7174,LAEVGRVL False True LAEVGRVL 37.993647 428.766253650188 1860934.75 7170.0 nc|ENSG00000010165|Q8N6R0-4|METTL13;;ENSG00000010165|ENST00000361735|METTL13;;nc|ENSG00000010165|Q8N6R0-3|METTL13;;nc|ENSG00000010165|Q8N6R0-2|METTL13;;nc|ENSG00000010165|Q8N6R0-1|METTL13 1.9368787209192917 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7175 37.996 116.0 721830.0 25 0 143900.0 + 38804 TVFDAKRLIGR 11 55 425.9227419999024 1274.7463965999073 3 425.9224731326103 MULTI CID FTMS 0 0 0 7170 350419.625 1.0 0 0.0 5 Unmodified _TVFDAKRLIGR_ ENSG00000044574|ENST00000324460|HSPA5;ENSG00000109971|ENST00000534624|HSPA8;ENSG00000173110|ENST00000309758|HSPA6;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000442006.2_1_1:39174637-39175513:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8;nc|ENSG00000204389|P0DMV8-2|HSPA1A;nc|ENSG00000225217|P48741|HSPA7 27.128809495255545 0.4552099081665574 5 TV{M(Oxidation (M))|F}D 4 7 56.186 0.0 0.0 4.4076 0.0 0.0 0.0 809.511276172879 809.511276172879 39.98773768811724 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + TV{M(Oxidation (M))|F}D 4.4076 + + 19 + 1 2.239 73833.2 1.0 2938 4235 7170 SUDHL4_400M_050219_1,7175 SUDHL4_400M_050219_1,7175,TVFDAKRLIGR False True TVFDAKRLIGR 37.99606 425.92247313261 2209315.25 7170.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000225217|P48741|HSPA7;;nc|ENSG00000109971|P11142-2|HSPA8;;ENSG00000044574|ENST00000324460|HSPA5;;ENSG00000173110|ENST00000309758|HSPA6;;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;;ENSG00000204388|ENST00000375650|HSPA1B;;nc|ENSG00000204389|P0DMV8-2|HSPA1A;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENSG00000204390|ENST00000375654|HSPA1L;;ENST00000442006.2_1_1:39174637-39175513:+|nuORF;;ENSG00000204389|ENST00000375651|HSPA1A;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 5.09016211827596 3.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7176 38.0 214.0 290990.0 25 0 50545.0 + + -1 ILDAGGHNVTI 11 87 555.3014423069139 1108.5883316806278 2 555.3013793826103 MULTI CID FTMS 0 0 0 7170 266796.09375 1.0 0 0.0 6 Carbamidomethyl (C) _LLDYSC(Carbamidomethyl (C))LLL_ ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1 57.47134341890925 0.0274820932774257 5 {I|L}{I|L}DAN 5 -1 58.672 0.0 0.0 5.2925 0.0 0.0 0.0 579.2916964166624 579.2916964166624 30.61452479087194 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.3494850021680094 {I|L}{I|L}DAN 5.2925 - 689 + 1 2.239 54821.6 1.0 2939 4235 7170 SUDHL4_400M_050219_1,7176 SUDHL4_400M_050219_1,7176,LLDYSCLLL False False ILDAGGHNVTI 38.000122 555.30137938261 1618435.25 7170.0 ENSG00000173692|ENST00000308696|PSMD1;;nc|ENSG00000173692|Q99460-2|PSMD1 4.446384112040202 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7177 38.004 214.0 366210.0 25 0 52031.0 38221 TPRPTRAA 8 111 435.2508431776387 868.4871334220775 2 435.2507507205009 MULTI CID FTMS 0 0 0 7170 219145.640625 0.2356079193627547 -15 0.6382331848144531 7 Unmodified _TPRPTRAA_ ENST00000469202.5_1_7:32997059-33014827:+|nuORF;ENST00000494374.5_1_7:32997059-33028356:+|nuORF 2.302733041254933 0.8103549651115762 5 {I|L} 1 8 9.2082 0.0 0.0 1.0603 0.0 0.0 737.3923591074275 0.0 737.3923591074275 0.0 0.0594961164985363 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0603 - 14 + 1 2.239 65096.6 1.0 2940 4235 7170 SUDHL4_400M_050219_1,7177 SUDHL4_400M_050219_1,7177,TPRPTRAA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7178 38.01 303.0 308990.0 25 0 15512.0 + 12483 GVAQPGVGF 9 129 416.2210971776979 830.4276414221958 2 416.2212707400322 MULTI CID FTMS 0 0 0 7170 207869.9375 1.0 0 0.0 8 Unmodified _GVAQPGVGF_ ENST00000512894.5_3_3:134205280-134214160:+|nuORF;ENST00000513612.6_1_3:134205280-134206907:+|nuORF 34.18733598223924 0.1073653526364521 5 [VG]PGS 5 5 29.666 0.0 0.0 3.5723 0.0 0.0 0.0 430.2120096685428 430.2120096685428 9.488474775526186 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VG]PGS 3.5723 - 127 1 2.239 76012.0 1.0 2941 4235 7170 SUDHL4_400M_050219_1,7178 SUDHL4_400M_050219_1,7178,GVAQPGVGF True True GVAQPGVGF 38.009706 416.221270740032 1282545.375 7170.0 ENST00000513612.6_1_3:134205280-134206907:+|nuORF;;ENST00000512894.5_3_3:134205280-134214160:+|nuORF 5.755984385808309 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7179 38.016 320.0 314460.0 25 0 34631.0 + 7222 EERADLIAY 9 111 540.2721048696922 1078.5296568061842 2 540.2728149294853 MULTI CID FTMS 0 0 0 7170 177773.1875 0.3343172701360214 -2 0.1077842712402343 9 Unmodified _EERADLIAY_ ENSG00000172115|ENST00000305786|CYCS 36.506200033944 0.094635877243972 5 AD{I|L}{I|L}AY 6 3 57.938 0.0 0.0 5.372 0.0 0.0 414.1872730939469 0.0 414.1872730939469 0.0 43.48175639362074 0.0 0.0 0 1.0 0.0 1.1307196863200843 0.0 + AD{I|L}{I|L}AY 5.372 + + 494 1 2.239 80183.3 1.0 2942 4235 7170 SUDHL4_400M_050219_1,7179 SUDHL4_400M_050219_1,7179,EERADLIAY True True EERADLIAY 38.015533 540.272814929485 3234271.0 7170.0 ENSG00000172115|ENST00000305786|CYCS 5.326319217681885 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7180 38.022 338.0 436360.0 25 0 55370.0 + 42987 VVVAVGRAL 9 130 442.29012287895466 882.5656928247093 2 442.2903930544853 MULTI CID FTMS 0 0 0 7170 132104.84375 0.2387091094633578 -1 0.1007575988769531 10 Unmodified _VVVAVGRAL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF 34.10243960390752 0.1078313939113124 5 VVVAVY 6 4 58.02 0.0 0.0 6.5741 0.0 0.0 0.0 249.16121851138908 249.16121851138908 39.32380653375944 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.0 0.0 VVVAVY 6.5741 - 160 + 1 2.239 116332.3 1.0 2943 4235 7170 SUDHL4_400M_050219_1,7180 SUDHL4_400M_050219_1,7180,VVVAVGRAL True True VVVAVGRAL 38.021655 442.290393054485 2629266.5 7170.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000414411.3_1_11:61081295-61081943:-|nuORF 3.5503973960876465 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7181 38.027 294.0 245380.0 25 0 52426.0 + 33666 SIVKQPMK 8 108 465.777621861154 929.540690789108 2 465.7782165408134 MULTI CID FTMS 0 0 0 7170 121529.203125 0.8611699375547167 -12 0.5689849853515625 11 Unmodified _SIVKQPMK_ REV__ENSG00000232125|ENST00000452335|DYTN 5.230669730166228 0.792582437072536 5 {M(Oxidation (M))|F} 1 -1 12.764 0.0 0.0 1.3732 0.0 0.0 764.4616788035596 0.0 764.4616788035596 0.0 1.3442265614629 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3732 + + 36 + 1 2.239 60444.1 1.0 2944 4235 7170 SUDHL4_400M_050219_1,7181 SUDHL4_400M_050219_1,7181,SIVKQPMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7182 38.037 490.0 439520.0 25 0 80325.0 + 14735 ILAQEIVKA 9 153 492.808255634293 983.601958335386 2 492.8086120486259 MULTI CID FTMS 0 0 0 7170 116569.484375 0.2152992462900044 -1 0.1007575988769531 12 Unmodified _ILAQEIVKA_ ENSG00000142230|ENST00000270225|SAE1 67.83816525789305 0.0219346420158844 5 {I|L}{I|L}AQE{I|L}VKA 9 0 + 90.523 0.0 0.0 9.2032 9.2032 87.284 0.0 0.0 0.0 36.47817481888636 1.5735204910150742 1.5735204910150742 1.5735204910150742 0 1.6906140654642814 2.0 0.3054621874040891 0.91944517631652 + + {I|L}{I|L}AQE{I|L}VKA;{I|L}{I|L}AQE{I|L}KG{I|L};{I|L}{I|L}AQE{I|L}KAV;{I|L}{I|L}A[AG]E{I|L}VKA;{I|L}{I|L}A[AG]E{I|L}KG{I|L};{I|L}{I|L}AQE{I|L}KVA;{I|L}{I|L}A[AG]E{I|L}KAV;{I|L}{I|L}A[AG]E{I|L}KVA;{I|L}{I|L}D{[NV]|[RG]}VRR;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L}{I|L}VRR 9.2032;9.0432;8.4695;8.267;8.107;7.9844;7.5333;7.0483;2.7105;2.3187 +;-;-;-;-;-;-;-;-;- + 2851 + 1 2.239 164514.6 1.0 2945 4235 7170 SUDHL4_400M_050219_1,7182 SUDHL4_400M_050219_1,7182,ILAQEIVKA True True ILAQEIVKA 38.036864 492.808612048626 2891601.5 7170.0 ENSG00000142230|ENST00000270225|SAE1 3.9437156518300376 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7183 38.04 173.0 353810.0 25 0 30445.0 + -1 FIFQLMNQ 8 94 528.7622908194234 0 528.7600585818291 PEAK CID FTMS 0 0 0 7170 74348.4609375 1.0 0 0.0 13 Oxidation (M) _FIFQLM(Oxidation (M))NQ_ REV__ENST00000413128.1_1_3:39686041-39686134:+|nuORF 20.871210003555333 0.4015059659087983 5 WE 2 -1 12.449 0.0 0.0 1.1794 0.0 0.0 527.2830522425592 210.0887240045532 737.3717762471123 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 WE 1.1794 - 101 + 1 2.239 54035.3 1.0 2946 4235 7170 SUDHL4_400M_050219_1,7183 SUDHL4_400M_050219_1,7183,FIFQLMNQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7184 38.046 332.0 206460.0 25 0 26492.0 + 14746 ILDDIGHGV 9 101 469.7508328068837 0 469.7507812380791 PEAK CID FTMS 0 0 0 7170 140293.921875 1.0 0 0.0 14 Unmodified _ILDDIGHGV_ ENSG00000138443|ENST00000261018|ABI2;ENST00000376135.5_1_2:204193204-204247972:+|nuORF;ENST00000441061.5_2_2:204231693-204292072:+|nuORF;nc|ENSG00000138443|Q9NYB9-2|ABI2;nc|ENSG00000138443|Q9NYB9-3|ABI2;nc|ENSG00000138443|Q9NYB9-4|ABI2;nc|ENSG00000138443|Q9NYB9|ABI2 32.116972079565 0.1004713836468113 5 DD{I|L}GK 5 5 24.508 0.0 0.0 2.6142 0.0 0.0 226.16641278330863 180.04331384830314 406.20972663161183 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 DD{I|L}GK 2.6142 - 49 + 1 2.239 59871.6 1.0 2947 4235 7170 SUDHL4_400M_050219_1,7184 SUDHL4_400M_050219_1,7184,ILDDIGHGV True True ILDDIGHGV 38.046266 469.750781238079 665380.6875 7170.0 nc|ENSG00000138443|Q9NYB9-2|ABI2;;ENSG00000138443|ENST00000261018|ABI2;;ENST00000441061.5_2_2:204231693-204292072:+|nuORF;;ENST00000376135.5_1_2:204193204-204247972:+|nuORF;;nc|ENSG00000138443|Q9NYB9-4|ABI2;;nc|ENSG00000138443|Q9NYB9|ABI2;;nc|ENSG00000138443|Q9NYB9-3|ABI2 3.825268824895223 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7185 38.06 800.0 171710.0 25 0 16622.0 -1 0 118 632.9782656396939 1895.9129675192808 3 632.9796020388603 MULTI CID FTMS 0 0 0 7170 119641.03125 0.1896860393332745 -4 0.2723312377929687 15 5 G{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 7 -1 39.028 0.0 0.0 2.0586 0.0 0.0 1095.4900183799916 0.0 1095.4900183799916 0.0 4.942963474852604 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 2.0586 - 345 1 2.239 109330.5 0.5400000214576721 2948 4235 7170 SUDHL4_400M_050219_1,7185 SUDHL4_400M_050219_1,7185, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7186 38.074 800.0 60165.0 25 0 4374.3 + 7975 ELVQEAIYFTK 11 81 670.8570528922814 1339.6995528513628 2 670.8561279177666 MULTI CID FTMS 0 0 0 7170 103203.3046875 1.0 0 0.0 16 Unmodified _ELVQEAIYFTK_ REV__ENST00000548535.1_1_12:76779917-76783618:-|nuORF 7.608950283845883 0.8392484121837455 5 TATTT 5 -1 23.29 0.0 0.0 1.7384 0.0 0.0 555.2704279507753 306.18222986392817 861.4526578147036 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8252574989159953 0.0 TATTT 1.7384 - 166 + 1 2.239 44414.5 0.5099999904632568 2949 4235 7170 SUDHL4_400M_050219_1,7186 SUDHL4_400M_050219_1,7186,ELVQEAIYFTK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7188 38.079 66.0 652000.0 25 0 35383.0 29423 QLETKQVSL 9 83 523.2979114704563 1044.5812700077124 2 523.2980224490166 MULTI CID FTMS 0 0 0 7187 555911.9375 0.5204162327714998 2 -0.1642379760742187 1 Unmodified _QLETKQVSL_ ENST00000495714.1_1_7:36447357-36456706:+|nuORF 21.59015148037692 0.2564810811560323 5 Q{I|L}[QP]S{I|L} 6 4 26.432 0.0 0.0 2.5304 0.0 0.0 360.20039627016064 0.0 360.20039627016064 0.0 12.452359395051715 0.0 0.0 0 0.4247425010840047 0.0 0.3054621874040891 0.0 Q{I|L}[QP]S{I|L} 2.5304 - 163 + 1 2.249 38677.0 1.0 2950 4236 7187 SUDHL4_400M_050219_1,7188 SUDHL4_400M_050219_1,7188,QLETKQVSL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7189 38.081 95.0 425470.0 25 0 42408.0 + 38991 TVQSGFAVEL 10 75 525.7776272462775 0 525.7770263552666 PEAK CID FTMS 0 0 0 7187 397614.84375 1.0 0 0.0 2 Unmodified _TVQSGFAVEL_ REV__ENSG00000130714|ENST00000402686|POMT1;REV__ENST00000462375.5_1_9:134385592-134386855:+|nuORF;REV__ENST00000485278.5_1_9:134386708-134386855:+|nuORF;REV__nc|ENSG00000130714|Q9Y6A1-3|POMT1;REV__nc|ENSG00000130714|Q9Y6A1-4|POMT1;REV__nc|ENSG00000130714|Q9Y6A1|POMT1 32.78568957990786 0.1876390401607402 5 EV 2 -1 16.599 0.0 0.0 1.5815 0.0 0.0 131.09802685407982 687.3094576471311 818.407484501211 0.0 0.0 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 EV 1.5815 - 35 + 1 2.249 38652.6 1.0 2951 4236 7187 SUDHL4_400M_050219_1,7189 SUDHL4_400M_050219_1,7189,TVQSGFAVEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7190 38.083 31.0 1452400.0 25 0 241140.0 + 39491 KINEAIVAV 9 62 478.7924524321911 955.5703519311822 2 478.7926208376884 MULTI CID FTMS 0 0 0 7187 1938038.625 1.0 0 0.0 3 Unmodified _VARRERAV_ ENSG00000087302|ENST00000261700|RTRAF 14.581692164780916 0.6954967302934248 5 {I|L}K{I|L}VAV 6 6 36.599 0.0 0.0 3.8301 0.0 0.0 314.12303359199376 0.0 314.12303359199376 0.0 21.11432819416656 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 {I|L}K{I|L}VAV 3.8301 - 27 1 2.249 43717.4 1.0 2952 4236 7187 SUDHL4_400M_050219_1,7190 SUDHL4_400M_050219_1,7190,VARRERAV False False KINEAIVAV 38.082657 478.792620837688 10935442.0 7187.0 ENSG00000087302|ENST00000261700|RTRAF 2.4326961239178977 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7191 38.084 69.0 990350.0 25 0 125510.0 + 45693 YWQNHPEL 8 93 543.7531316567009 1085.4917103802018 2 543.7541992068291 MULTI CID FTMS 0 0 0 7187 759493.6875 0.454849283134803 -1 0.1050376892089843 4 Unmodified _YWQNHPEL_ ENSG00000119203|ENST00000238112|CPSF3 64.23631603340823 0.116217441302575 5 YWQNH[EP]{I|L} 8 0 + 74.484 0.0 0.0 6.8618 6.8618 93.075 0.0 0.0 0.0 49.16279711903263 9.759611050913492 9.759611050913492 9.262137858390815 0 0.6549471895720984 2.0 1.16944517631652 0.7742275032520141 + + YWQNH[EP]{I|L};YW[AG]NH[EP]{I|L};YWQGGH[EP]{I|L};YWQ[KT][HS]H;YWQ{[WT]|[RM]}[R{M(Oxidation (M))|F}];YADQNH[EP]{I|L};YWQA{[ES]|[DT]|[{I|L}C]}[R{M(Oxidation (M))|F}];YADQ{[WT]|[RM]}[R{M(Oxidation (M))|F}];YW[AG]{[WT]|[RM]}[R{M(Oxidation (M))|F}];YADQA{[ES]|[DT]|[{I|L}C]}[R{M(Oxidation (M))|F}] 6.8618;6.0085;5.7559;5.1948;4.3609;4.2887;4.1729;3.624;3.5014;3.4423 +;-;-;-;-;-;-;-;-;- + 472 + 1 2.249 57675.5 1.0 2953 4236 7187 SUDHL4_400M_050219_1,7191 SUDHL4_400M_050219_1,7191,YWQNHPEL True True YWQNHPEL 38.084303 543.754199206829 9678796.0 7187.0 ENSG00000119203|ENST00000238112|CPSF3 7.571038881937663 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7192 38.087 127.0 434900.0 25 0 36520.0 + 35548 STPTSFNLRP 10 78 560.2951125195101 1118.57567210582 2 560.2953369021416 MULTI CID FTMS 0 0 0 7187 373822.875 0.805042730619464 -1 0.1050376892089843 5 Unmodified _STPTSFNLRP_ REV__ENSG00000178921|ENST00000314666|PFAS 15.847184025352805 0.5816416552707754 5 MSTN{[VA]|[{I|L}G]}RP 8 -1 39.615 0.0 0.0 3.5416 0.0 0.0 244.14306727894137 0.0 244.14306727894137 0.0 21.48185062238837 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3252574989159953 MSTN{[VA]|[{I|L}G]}RP 3.5416 - 144 + 1 2.249 51142.1 1.0 2954 4236 7187 SUDHL4_400M_050219_1,7192 SUDHL4_400M_050219_1,7192,STPTSFNLRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7193 38.089 93.0 506170.0 25 0 83832.0 + + 33443 VLNPETTVV 9 76 486.2734853745787 970.5324178159574 2 486.2729980349541 MULTI CID FTMS 0 0 0 7187 340106.375 1.0 0 0.0 6 Unmodified _SIATIELPQ_ ENSG00000138801|ENST00000265174|PAPSS1 15.847184025352805 0.4077185912009129 5 [{I|L}V]N 3 -1 24.181 0.0 0.0 2.4915 0.0 0.0 0.0 641.3134596462886 641.3134596462886 7.727562184969372 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}V]N 2.4915 - 64 1 2.249 46103.1 1.0 2955 4236 7187 SUDHL4_400M_050219_1,7193 SUDHL4_400M_050219_1,7193,SIATIELPQ False False VLNPETTVV 38.088938 486.272998034954 2425715.5 7187.0 ENSG00000138801|ENST00000265174|PAPSS1 2.961378335952759 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7194 38.092 164.0 450420.0 25 0 52217.0 + 15051 ILYNIKQEY 9 102 592.3215872071008 1182.6286214810016 2 592.3217651247978 MULTI CID FTMS 0 0 0 7187 283213.75 0.8474156452165333 -1 0.1050376892089843 7 Unmodified _ILYNIKQEY_ ENSG00000135334|ENST00000257787|AKIRIN2 62.57269311338072 0.0246576765497938 5 {I|L}{I|L}Y{M(Oxidation (M))|F}QK{I|L}S 8 5 65.108 0.0 0.0 5.5054 0.0 0.0 0.0 187.05515466861564 187.05515466861564 42.19844014144273 0.0 0.0 0.0 0 0.6421590589602533 2.0 0.8494850021680094 0.805462187404089 {I|L}{I|L}Y{M(Oxidation (M))|F}QK{I|L}S 5.5054 - 1009 + 1 2.249 59541.8 1.0 2956 4236 7187 SUDHL4_400M_050219_1,7194 SUDHL4_400M_050219_1,7194,ILYNIKQEY True True ILYNIKQEY 38.092163 592.321765124798 2004315.25 7187.0 ENSG00000135334|ENST00000257787|AKIRIN2 5.840814272562663 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7195 38.099 361.0 340980.0 25 0 41946.0 + 1362 ALAAALAY 8 166 382.22092792327993 762.4273029133599 2 382.2205688357353 MULTI CID FTMS 0 0 0 7187 218109.71875 0.4830141168343528 -1 0.1050376892089843 8 Unmodified _ALAAALAY_ REV__ENSG00000142661|ENST00000374434|MYOM3;REV__ENST00000475306.1_1_1:24410803-24434643:-|nuORF;REV__nc|ENSG00000142661|Q5VTT5-2|MYOM3 0.7936320650641473 0.8195151834710337 5 H 1 -1 8.1726 0.0 0.0 1.0719 0.0 0.0 607.3609557227334 0.0 607.3609557227334 0.0 -0.569649424739513 -0.569649424739513 0.0 0 0.0 0.0 0.0 0.0 H 1.0719 - 20 + 1 2.249 99535.9 1.0 2957 4236 7187 SUDHL4_400M_050219_1,7195 SUDHL4_400M_050219_1,7195,ALAAALAY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7196 38.103 248.0 320570.0 25 0 38309.0 + 38933 TVLSRGSAL 9 109 452.2659604455743 902.5173679579484 2 452.2652465701103 MULTI CID FTMS 0 0 0 7187 165222.671875 1.0 0 0.0 9 Unmodified _TVLSRGSAL_ ENST00000495425.6_1_17:19458825-19480863:+|nuORF 25.399314129420983 0.2080152500878129 5 {[TV]|[{I|L}S]}{I|L}HT 5 6 47.329 0.0 0.0 5.2441 0.0 0.0 0.0 348.1801851861938 348.1801851861938 34.56485629844558 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.6382104921644451 0.0 {[TV]|[{I|L}S]}{I|L}HT 5.2441 - 63 + 1 2.249 69488.6 1.0 2958 4236 7187 SUDHL4_400M_050219_1,7196 SUDHL4_400M_050219_1,7196,TVLSRGSAL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7197 38.11 400.0 235520.0 25 0 18022.0 + + 23441 ALMPVTPQA 9 145 464.25110512660746 926.4876573200148 2 464.2514221072197 MULTI CID FTMS 0 0 0 7187 130524.046875 1.0 0 0.0 10 Unmodified _LTFGPPPAQ_ nc|ENSG00000115825|O94806-2|PRKD3;ENSG00000115825|ENST00000234179|PRKD3;ENST00000494667.5_1_2:37496701-37543667:-|nuORF 21.74664581756881 0.2544899275067181 5 [QP]S 3 -1 12.949 0.0 0.0 1.3976 0.0 0.0 0.0 611.3202433397993 611.3202433397993 -0.3176353868273018 0.0 -0.3176353868273018 0.0 0 0.0 0.8538719643217619 0.2614393726401688 0.0 [QP]S 1.3976 - 288 1 2.249 73963.7 1.0 2959 4236 7187 SUDHL4_400M_050219_1,7197 SUDHL4_400M_050219_1,7197,LTFGPPPAQ False False ALMPVTPQA 38.110438 464.25142210722 1778487.625 7187.0 nc|ENSG00000115825|O94806-2|PRKD3;;ENSG00000115825|ENST00000234179|PRKD3;;ENST00000494667.5_1_2:37496701-37543667:-|nuORF 2.364504893620809 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7198 38.121 583.0 237480.0 25 0 7680.6 + 16088 RLLEQKVEL 9 163 564.3414838366614 1126.668414740123 2 564.3412963747978 MULTI CID FTMS 0 0 0 7187 118912.34375 1.0 0 0.0 11 Unmodified _ITQVARVVIE_ ENST00000557680.1_1_14:39648378-39651535:+|nuORF;ENSG00000100941|ENST00000216832|PNN 39.94969957227396 0.1580982266129622 5 {[QN]|[E{I|L}]|[KN]}[R{I|L}]QKVE{I|L} 9 7 + 66.881 0.0 0.0 5.9362 5.9362 89.238 0.0 0.0 0.0 8.63083996824406 51.043866101222 8.63083996824406 9.208187539523742 0 0.4423877696554315 1.0969100130080565 0.4247425010840047 0.5356668758921829 {[QN]|[E{I|L}]|[KN]}[R{I|L}]QKVE{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}][AG]KVE{I|L};{[QN]|[E{I|L}]|[KN]}[PA][KT]KVE{I|L};{[QN]|[E{I|L}]|[KN]}RR{[NV]|[RG]}VE{I|L};{I|L}{M(Oxidation (M))|F}VK[KT][KT]Y;{[QV]|[N{I|L}]|[RA]|[KV]}[RK]QKVE{I|L};{[QN]|[E{I|L}]|[KN]}RRRRE{I|L};[VP][DV][KT]KVE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RK][AG]KVE{I|L};[KP]{[QG]|[NA]}[KT]KVE{I|L} 5.9362;5.1189;4.2313;3.789;3.5465;3.4506;2.9429;2.85;2.6333;2.2139 -;-;-;-;-;-;-;-;-;- 615 1 2.249 109209.4 1.0 2960 4236 7187 SUDHL4_400M_050219_1,7198 SUDHL4_400M_050219_1,7198,ITQVARVVIE False False RLLEQKVEL 38.120655 564.341296374798 826772.1875 7187.0 ENST00000557680.1_1_14:39648378-39651535:+|nuORF;;ENSG00000100941|ENST00000216832|PNN 2.1292007764180503 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7199 38.126 298.0 186970.0 25 0 12454.0 + 40682 VLFGREVSPA 10 99 537.8003665338869 1073.5861801345736 2 537.8005248904228 MULTI CID FTMS 0 0 0 7187 103565.7265625 1.0 0 0.0 12 Unmodified _VLFGREVSPA_ ENSG00000105404|ENST00000222008|RABAC1 24.99096001346401 0.4071966087057876 5 [{I|L}V][{M(Oxidation (M))|F}T]K[W{I|L}][PA] 9 5 + 32.438 0.0 0.0 3.0214 3.0214 54.206 0.0 0.0 0.0 -2.8097129311039666 1.183174735333175 -2.8097129311039666 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 [{I|L}V][{M(Oxidation (M))|F}T]K[W{I|L}][PA];[{I|L}V]{M(Oxidation (M))|F}[QT][W{I|L}][PA];[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}KHH[PA];[{I|L}V][{M(Oxidation (M))|F}T]K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L};[{I|L}V]{M(Oxidation (M))|F}[QT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L};[{I|L}V]{[WS]|[C(Carbamidomethyl (C)){I|L}]}KQQ[VS];[DV][{M(Oxidation (M))|F}V]K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L};WHHK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L};[{I|L}V]{M(Oxidation (M))|F}[QT][RD][VP];[{I|L}V][{M(Oxidation (M))|F}T]K[RD][VP] 3.0214;3.0214;2.8033;2.1979;2.1979;1.7317;1.6792;1.6343;1.5582;1.5582 -;-;-;-;-;-;-;-;-;- 157 + 1 2.249 50836.3 1.0 2961 4236 7187 SUDHL4_400M_050219_1,7199 SUDHL4_400M_050219_1,7199,VLFGREVSPA False True VLFGREVSPA 38.126126 537.800524890423 534989.625 7187.0 ENSG00000105404|ENST00000222008|RABAC1 4.9934492111206055 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7200 38.13 195.0 443190.0 25 0 26629.0 + -1 FSYGSGLAA 9 101 872.4167595408504 0 872.4161254763603 PEAK CID FTMS 0 0 0 7187 257634.796875 1.0 0 0.0 13 ENSG00000112972|ENST00000325110|HMGCS1;ENST00000508319.1_1_5:43294149-43294911:-|nuORF;nc|ENSG00000134240|P54868-2|HMGCS2;nc|ENSG00000134240|P54868-3|HMGCS2;ENSG00000134240|ENST00000369406|HMGCS2 5 PN{I|L} 3 -1 16.198 0.0 0.0 0.92941 0.0 0.0 260.09676124156323 1155.5124338424223 1415.6091950839857 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PN{I|L} 0.92941 - 178 + 1 2.249 63156.9 1.0 2962 4236 7187 SUDHL4_400M_050219_1,7200 SUDHL4_400M_050219_1,7200, False False FSYGSGLAA 38.129892 872.41612547636 1259969.875 7187.0 ENSG00000112972|ENST00000325110|HMGCS1;;ENST00000508319.1_1_5:43294149-43294911:-|nuORF;;nc|ENSG00000134240|P54868-2|HMGCS2;;nc|ENSG00000134240|P54868-3|HMGCS2;;ENSG00000134240|ENST00000369406|HMGCS2 0.1173655986785888 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7201 38.133 140.0 425170.0 25 0 30229.0 + 18898 LAVLSICH 8 102 428.242954561548 854.471356189896 2 428.2474853396416 MULTI CID FTMS 0 0 0 7187 266249.90625 0.7227692761870345 -14 0.69354248046875 14 Unmodified _LAVLSICH_ REV__ENSG00000120088|ENST00000314537|CRHR1;REV__ENST00000582766.5_1_17:43884387-43907895:+|nuORF;REV__nc|ENSG00000263715|P34998-1|CRHR1;REV__nc|ENSG00000263715|P34998-3|CRHR1;REV__nc|ENSG00000263715|P34998-4|CRHR1 6.354104778181461 0.7857632046190106 5 AEV 3 -1 12.703 0.0 0.0 1.4867 0.0 0.0 112.03631087915228 440.2629793756469 552.2992902547992 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AEV 1.4867 - 27 + 1 2.249 53379.0 1.0 2963 4236 7187 SUDHL4_400M_050219_1,7201 SUDHL4_400M_050219_1,7201,LAVLSICH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7202 38.142 478.0 334760.0 25 0 76747.0 -1 0 140 531.3012167439468 530.2939402773468 1 531.3011962771416 MULTI CID FTMS 0 0 0 7187 137376.671875 0.0540406352603428 -4 0.2786827087402344 15 5 {M(Oxidation (M))|F} 1 -1 10.596 0.0 0.0 1.9981 0.0 0.0 365.2148825154312 0.0 365.2148825154312 0.0 0.1113819735557619 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.9981 - 47 + 1 2.249 155207.9 1.0 2964 4236 7187 SUDHL4_400M_050219_1,7202 SUDHL4_400M_050219_1,7202, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7203 38.151 485.0 174820.0 25 0 9813.5 + 9730 FLYQQQGRL 9 123 576.8121692157401 1151.6097854982802 2 576.8101684451103 MULTI CID FTMS 0 0 0 7187 124272.5703125 1.0 0 0.0 16 Unmodified _FLYQQQGRL_ ENSG00000019582|ENST00000009530|CD74;ENST00000517791.1_1_5:149786694-149792396:-|nuORF;ENST00000522153.1_1_5:149786338-149792312:-|nuORF;ENST00000523836.5_1_5:149785806-149792312:-|nuORF;nc|ENSG00000019582|P04233-2|CD74;nc|ENSG00000019582|P04233-3|CD74;nc|ENSG00000019582|P04233-4|CD74;nc|ENSG00000019582|P04233-5|CD74 48.345845343767074 0.0439967357579942 5 [{I|L}P]D{M(Oxidation (M))|F}KQY{I|L}E 9 7 + 68.03 0.0 0.0 5.9074 5.9074 82.885 0.0 0.0 0.0 2.2868817414666154 2.2868817414666154 2.2868817414666154 2.2868817414666154 0 0.4247425010840047 1.0 0.0 1.0629529932484498 [{I|L}P]D{M(Oxidation (M))|F}KQY{I|L}E;{M(Oxidation (M))|F}{I|L}YQKYKY;[{I|L}P]D{M(Oxidation (M))|F}K[AG]Y{I|L}E;[{I|L}P][YV]QQY{I|L}E;[{I|L}P]D{M(Oxidation (M))|F}KQ{I|L}YE;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{NN|[MP]|[D{I|L}]|[EV]}KQY{I|L}E;{M(Oxidation (M))|F}{I|L}Y[AG]KYKY;{M(Oxidation (M))|F}Y{I|L}QKYKY;{M(Oxidation (M))|F}{I|L}YQK{M(Oxidation (M))|F}{I|L}PP;[{I|L}P][YV]Q[AG]Y{I|L}E 5.9074;5.7088;5.1078;5.0634;4.9737;4.9289;4.9045;4.7751;4.3523;4.2638 -;-;-;-;-;-;-;-;-;- 1080 1 2.249 67303.0 1.0 2965 4236 7187 SUDHL4_400M_050219_1,7203 SUDHL4_400M_050219_1,7203,FLYQQQGRL True True FLYQQQGRL 38.150942 576.81016844511 1588559.25 7187.0 ENST00000522153.1_1_5:149786338-149792312:-|nuORF;;ENST00000523836.5_1_5:149785806-149792312:-|nuORF;;nc|ENSG00000019582|P04233-5|CD74;;nc|ENSG00000019582|P04233-2|CD74;;ENSG00000019582|ENST00000009530|CD74;;nc|ENSG00000019582|P04233-4|CD74;;ENST00000517791.1_1_5:149786694-149792396:-|nuORF;;nc|ENSG00000019582|P04233-3|CD74 5.9599307378133135 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7204 38.155 196.0 249450.0 25 0 16662.0 + 13412 HLLNESPML 9 94 535.2727927610815 0 535.2739135622978 PEAK CID FTMS 0 0 0 7187 121151.8046875 0.6753081086542159 -4 0.2786827087402344 17 Oxidation (M) _HLLNESPM(Oxidation (M))L_ ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 48.345845343767074 0.036192834052621 5 MSE 3 8 21.287 0.0 0.0 1.9921 0.0 0.0 244.14847751259416 474.24521814517817 718.3936956577724 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.5 0.0 MSE 1.9921 - 121 + 1 2.249 43500.0 1.0 2966 4236 7187 SUDHL4_400M_050219_1,7204 SUDHL4_400M_050219_1,7204,HLLNESPML True False HLLNESPML 38.154698 535.273913562298 1204055.875 7187.0 ENSG00000155561|ENST00000285968|NUP205;;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 6.668994744618733 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7206 38.159 43.0 812720.0 25 0 104610.0 + 11814 GLNEEIARV 9 64 500.7748083907432 999.5350638482864 2 500.7749511599541 MULTI CID FTMS 0 0 0 7205 794489.0625 0.1521669071779621 2 -0.1357307434082031 1 Unmodified _GLNEEIARV_ ENSG00000080986|ENST00000261597|NDC80 39.94969957227396 0.0757326808254658 5 {[VA]|[{I|L}G]}NEE{I|L}ARV 9 0 + 78.822 0.0 0.0 7.8859 7.8859 93.946 0.0 0.0 0.0 64.86957297830479 13.728721920568248 13.728721920568248 9.208187539523747 0 0.7614393726401688 2.0 0.0 0.805462187404089 + + {[VA]|[{I|L}G]}NEE{I|L}ARV;{[VA]|[{I|L}G]}GGEE{I|L}ARV 7.8859;6.9646 +;- + 46 + 1 2.249 34423.9 1.0 2967 4237 7205 SUDHL4_400M_050219_1,7206 SUDHL4_400M_050219_1,7206,GLNEEIARV True True GLNEEIARV 38.159488 500.774951159954 71457594.0 7205.0 ENSG00000080986|ENST00000261597|NDC80 7.079494794209798 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7207 38.161 62.0 810700.0 25 0 129730.0 -1 0 79 412.2281995384317 411.22092307183175 1 412.2304260134697 MULTI CID FTMS 0 0 0 7205 721823.5 0.7017499428838087 -2 0.1858062744140625 2 5 N 1 -1 0.088644 0.0 0.0 0.021556 0.0 0.0 85.02589851304113 209.12966333560783 294.155561848649 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.021556 - 5 + 1 2.249 46682.0 1.0 2968 4237 7205 SUDHL4_400M_050219_1,7207 SUDHL4_400M_050219_1,7207, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7208 38.164 137.0 430760.0 25 0 65841.0 + 40689 VLFPPPML 8 84 457.2642548034081 912.513956673616 2 457.2645446658134 MULTI CID FTMS 0 0 0 7205 327441.84375 0.8746190390970726 -2 0.1858062744140625 3 Unmodified _VLFPPPML_ REV__ENSG00000146247|ENST00000275034|PHIP;REV__ENSG00000165288|ENST00000373275|BRWD3;REV__ENSG00000185658|ENST00000342449|BRWD1;REV__nc|ENSG00000165288|Q6RI45-2|BRWD3;REV__nc|ENSG00000165288|Q6RI45-3|BRWD3;REV__nc|ENSG00000165288|Q6RI45-4|BRWD3;REV__nc|ENSG00000165288|Q6RI45-5|BRWD3;REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1;REV__nc|ENSG00000185658|Q9NSI6|BRWD1 2.889219685676258 0.8067950007271085 5 {I|L} 1 -1 10.969 0.0 0.0 1.2021 0.0 0.0 781.4192281353334 0.0 781.4192281353334 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2021 + + 9 + 1 2.249 49510.0 1.0 2969 4237 7205 SUDHL4_400M_050219_1,7208 SUDHL4_400M_050219_1,7208,VLFPPPML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7209 38.167 137.0 501940.0 25 0 71163.0 40667 VLEQALAP 8 95 420.7434663776574 0 420.7435180544853 PEAK CID FTMS 0 0 0 7205 325376.21875 0.7318308318780998 -2 0.1858062744140625 4 Unmodified _VLEQALAP_ ENST00000361028.5_1_6:28349926-28350043:-|nuORF;ENST00000396827.3_1_6:28348556-28350043:-|nuORF 0.7936320650641473 0.5979579398327216 5 C 1 8 5.7133 0.0 0.0 0.68059 0.0 0.0 317.20896537074606 416.2191561334594 733.4281215042055 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 C 0.68059 - 1 + 1 2.249 56909.4 1.0 2970 4237 7205 SUDHL4_400M_050219_1,7209 SUDHL4_400M_050219_1,7209,VLEQALAP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7210 38.18 800.0 206220.0 25 0 30397.0 16316 IYEEYFNDEE 10 157 675.7704024911816 1349.526252049163 2 675.7712890505791 MULTI CID FTMS 0 0 0 7205 211648.109375 0.5904829888498784 -1 0.0807685852050781 5 Unmodified _IYEEYFNDEE_ ENSG00000171595|ENST00000311014|DNAI2;nc|ENSG00000171595|Q9GZS0-2|DNAI2 19.256988751693697 0.5244284437930726 5 [Y{I|L}]EY[NS][C(Carbamidomethyl (C))C]EG{I|L} 11 6 + 62.91 0.0 0.0 4.6617 4.6617 83.153 0.0 0.0 0.0 35.915701215670914 8.238865841930156 8.238865841930156 6.505149978319906 0 0.7742275032520141 2.0 1.0994850021680094 0.6505149978319906 [Y{I|L}]EY[NS][C(Carbamidomethyl (C))C]EG{I|L};[Y{I|L}]YE[NS][C(Carbamidomethyl (C))C]EG{I|L};[Y{I|L}]{M(Oxidation (M))|F}[WC(Carbamidomethyl (C))][C(Carbamidomethyl (C))C]EG{I|L};[Y{I|L}]EY[NS]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[C(Carbamidomethyl (C))E]|[WC]};[Y{I|L}]YE[NS]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[C(Carbamidomethyl (C))E]|[WC]};[Y{I|L}]YP[C(Carbamidomethyl (C))M]{[QS]|[NT]}{[C(Carbamidomethyl (C))E]|[WC]};[Y{I|L}]YP[C(Carbamidomethyl (C))M][YE][DP];[Y{I|L}]{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))M]{[QS]|[NT]}{[C(Carbamidomethyl (C))E]|[WC]};[Y{I|L}]{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))M][YE][DP];[Y{I|L}]{M(Oxidation (M))|F}[WC(Carbamidomethyl (C))]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[C(Carbamidomethyl (C))E]|[WC]} 4.6617;4.1796;3.2103;2.6385;2.1565;1.785;1.7651;1.3209;1.301;1.1905 -;-;-;-;-;-;-;-;-;- 476 + 1 2.249 123019.0 0.8399999737739563 2971 4237 7205 SUDHL4_400M_050219_1,7210 SUDHL4_400M_050219_1,7210,IYEEYFNDEE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7211 38.184 187.0 231680.0 25 0 20491.0 12055 GQEMLKLSI 9 76 509.7837082481829 1017.5528635631656 2 509.7841674685478 MULTI CID FTMS 0 0 0 7205 200106.859375 1.0 0 0.0 6 Unmodified _GQEMLKLSI_ ENSG00000188869|ENST00000359440|TMC3;ENST00000559982.1_1_15:81630174-81666445:-|nuORF;nc|ENSG00000188869|Q7Z5M5-2|TMC3 24.99096001346401 0.2132109383330889 5 {[TV]|[{I|L}S]}{[WT]|[RM]}QA{I|L}{[TV]|[{I|L}S]} 9 5 + 38.072 0.0 0.0 3.7416 3.7416 79.136 0.0 0.0 0.0 4.54569748539577 7.147642715192511 4.54569748539577 4.54569748539577 0 0.5 1.3979400086720375 0.1923877696554315 0.4247425010840047 {[TV]|[{I|L}S]}{[WT]|[RM]}QA{I|L}{[TV]|[{I|L}S]};[QA]DM{I|L}K{I|L}{[TV]|[{I|L}S]};[QA]D{I|L}MK{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{[WT]|[RM]}[AG]A{I|L}{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}V][YV][YK]TV;[{I|L}T]{[WS]|[C(Carbamidomethyl (C)){I|L}]}QA{I|L}{[TV]|[{I|L}S]};{[ES]|[DT]|[{I|L}C]}[WR]K{I|L}{[TV]|[{I|L}S]};{[MG]|[TS]}[W{I|L}]QA{I|L}{[TV]|[{I|L}S]};[{M(Oxidation (M))|F}V][YV][YK]S{I|L};[{M(Oxidation (M))|F}V][RK]{[WS]|[C(Carbamidomethyl (C)){I|L}]}PV 3.7416;3.2948;2.999;2.8366;1.8392;1.6648;1.646;1.587;1.2695;1.1021 -;-;-;-;-;-;-;-;-;- 199 1 2.249 41130.7 1.0 2972 4237 7205 SUDHL4_400M_050219_1,7211 SUDHL4_400M_050219_1,7211,GQEMLKLSI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7212 38.191 387.0 327150.0 25 0 18488.0 -1 0 191 360.2066713747384 359.1993949081384 1 360.2056762576103 MULTI CID FTMS 0 0 0 7205 120853.8828125 0.0276017421112884 -12 0.7040939331054688 7 5 {[{M(Oxidation (M))|F}H]|[RQ]}G 3 -1 {[{M(Oxidation (M))|F}H]|[RQ]} + + 8.0989 -0.79181 -0.27864 2.2547 2.2547 53.133 0.0 0.0 0.0 0.0 0.4554023467366619 0.0 0.0 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}G 2.2547 - 16 + 1 2.249 100018.1 1.0 2973 4237 7205 SUDHL4_400M_050219_1,7212 SUDHL4_400M_050219_1,7212, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7213 38.205 800.0 132760.0 25 0 16634.0 -1 0 90 948.963742293888 1895.912931654576 2 948.9638549685478 MULTI CID FTMS 0 0 0 7205 96229.6953125 0.6125929838329854 -4 0.2935905456542969 8 5 H{I|L}PN[EP]{I|L}{M(Oxidation (M))|F} 8 -1 63.141 0.0 0.0 3.3304 0.0 0.0 0.0 945.4225557916624 945.4225557916624 54.21088627183353 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.3807196863200844 0.4247425010840047 H{I|L}PN[EP]{I|L}{M(Oxidation (M))|F} 3.3304 - 152 + 1 2.249 72675.8 0.5400000214576721 2974 4237 7205 SUDHL4_400M_050219_1,7213 SUDHL4_400M_050219_1,7213, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7214 38.211 315.0 349490.0 25 0 38158.0 + 9500 FLDPNNIPKA 10 115 564.806119932084 1127.597686930968 2 564.8059570193291 MULTI CID FTMS 0 0 0 7205 90574.1796875 0.1402188055324038 -4 0.2935905456542969 9 Unmodified _FLDPNNIPKA_ ENSG00000159063|ENST00000299626|ALG8;ENST00000532552.2_1_11:77817934-77820625:-|nuORF;nc|ENSG00000159063|Q9BVK2-2|ALG8 34.93206674587334 0.2110832994570416 5 TQ{I|L}NNPD{[QN]|[E{I|L}]|[KN]} 9 7 37.123 0.0 0.0 3.2922 0.0 0.0 85.0897694318375 0.0 85.0897694318375 0.0 8.916402071523606 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.3807196863200844 TQ{I|L}NNPD{[QN]|[E{I|L}]|[KN]} 3.2922 - 731 1 2.249 83811.7 1.0 2975 4237 7205 SUDHL4_400M_050219_1,7214 SUDHL4_400M_050219_1,7214,FLDPNNIPKA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7215 38.224 800.0 150180.0 25 0 16094.0 + -1 CIPYHWWYRWW 11 104 584.9321766950554 1751.774700685366 3 585.2655517458916 MULTI CID FTMS 0 0 0 7205 85930.09375 1.0 0 0.0 10 Carbamidomethyl (C) _C(Carbamidomethyl (C))IPYHWWYRWW_ REV__ENST00000410111.7_1_2:86406577-86422494:-|nuORF 0.0948413911109767 0.8747004676205551 5 SN 2 -1 16.964 0.0 0.0 0.96839 0.0 0.0 195.95298743685612 1351.72678663083 1547.679774067686 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3252574989159953 SN 0.96839 - 248 + 1 2.249 94589.3 0.5400000214576721 2976 4237 7205 SUDHL4_400M_050219_1,7215 SUDHL4_400M_050219_1,7215,CIPYHWWYRWW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7216 38.238 800.0 72958.0 25 0 3042.0 + -1 FLYWMIWSII 10 112 694.3568669331565 1386.699180933113 2 694.3583251833916 MULTI CID FTMS 0 0 0 7205 113580.921875 1.0 0 0.0 11 Oxidation (M) _FLYWM(Oxidation (M))IWSII_ REV__ENSG00000174358|ENST00000304460|SLC6A19 21.74664581756881 0.480091245866545 5 {[QV]|[N{I|L}]|[RA]|[KV]}ASW[W{I|L}]SAN{I|L}{I|L} 12 -1 + 46.175 0.0 0.0 3.3299 3.3299 77.279 0.0 0.0 0.0 3.556704881770905 16.61181443446619 3.556704881770905 3.556704881770905 0 0.6203715150305281 1.2218487496163564 0.0 0.1923877696554315 {[QV]|[N{I|L}]|[RA]|[KV]}ASW[W{I|L}]SAN{I|L}{I|L};{[TV]|[{I|L}S]}{[QG]|[NA]}W[W{I|L}]SAN{I|L}{I|L};[VG]AASW[W{I|L}]SAN{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}ASW[W{I|L}]{[QG]|[NA]}S{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[R{M(Oxidation (M))|F}][DP]QSAN{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}ASW[W{I|L}]SAGG{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AS{[DA]|[EG]}[W{I|L}]SAN{I|L}{I|L};[KA]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}D[PS]QSAN{I|L}{I|L};{[SA]|[TG]}N{I|L}W[W{I|L}]SAN{I|L}{I|L};[VG][QT]W[W{I|L}]SAN{I|L}{I|L} 3.3299;3.0734;2.8749;2.7559;2.7141;2.6738;2.6738;2.6141;2.5764;2.4314 -;-;-;-;-;-;-;-;-;- 665 1 2.249 46968.7 0.6100000143051147 2977 4237 7205 SUDHL4_400M_050219_1,7216 SUDHL4_400M_050219_1,7216,FLYWMIWSII False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7218 38.247 250.0 265680.0 25 0 20484.0 26864 PCLGVCKAL 9 102 452.24438895408025 0 452.2435180544853 PEAK CID FTMS 0 0 0 7217 134101.734375 0.7756763220056266 -2 0.1642379760742187 1 Unmodified _PCLGVCKAL_ ENSG00000167207|ENST00000647318|NOD2;nc|ENSG00000167207|Q9HC29|NOD2 11.640296217721598 0.2934555500198502 5 {I|L}G 2 7 9.464 0.0 0.0 1.0487 0.0 0.0 200.076105933748 529.2740572565061 729.3501631902541 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}G 1.0487 + + 29 + 1 2.261 56983.4 1.0 2978 4238 7217 SUDHL4_400M_050219_1,7218 SUDHL4_400M_050219_1,7218,PCLGVCKAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7219 38.261 800.0 75547.0 25 0 3979.2 + -1 AAVGALTGV 9 83 758.3640515671269 3029.4271004021075 4 758.8645507693291 MULTI CID FTMS 0 0 0 7217 36760.39453125 0.3978703466708201 2 -0.0783500671386718 2 nc|ENSG00000106459|Q16656-4|NRF1;nc|ENSG00000106459|Q16656-2|NRF1;nc|ENSG00000106459|Q16656-3|NRF1;ENSG00000106459|ENST00000393232|NRF1 5 VGT{I|L}V 5 -1 27.479 0.0 0.0 0.90708 0.0 0.0 2290.001612613632 267.1095064752563 2557.111119088888 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6421590589602533 0.0 VGT{I|L}V 0.90708 - 631 + 1 2.261 47859.1 0.5199999809265137 2979 4238 7217 SUDHL4_400M_050219_1,7219 SUDHL4_400M_050219_1,7219, False False AAVGALTGV 38.260527 758.864550769329 240680.859375 7217.0 nc|ENSG00000106459|Q16656-4|NRF1;;nc|ENSG00000106459|Q16656-2|NRF1;;nc|ENSG00000106459|Q16656-3|NRF1;;ENSG00000106459|ENST00000393232|NRF1 5.091056664784749 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7220 38.263 107.0 784870.0 25 0 59415.0 + 32031 RVIGTLEEV 9 89 508.29303039678337 1014.5715078603668 2 508.2930175662041 MULTI CID FTMS 0 0 0 7217 414676.03125 0.1432998295473198 -5 0.3770599365234375 3 Unmodified _RVIGTLEEV_ ENSG00000100401|ENST00000356244|RANGAP1 57.72198328787511 0.0273433238377839 5 [RV]{I|L}GT{I|L}EEV 9 0 + 74.078 0.0 0.0 7.3014 7.3014 95.869 0.0 0.0 0.0 12.632192780232783 52.76232052279747 12.632192780232783 21.938200260161125 0 1.1237125054200234 1.0 0.4247425010840047 0.0 + + [RV]{I|L}GT{I|L}EEV;{[QN]|[E{I|L}]|[KN]}[RK]{I|L}EEV;HHE{I|L}[RK]PV;[RV][RP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EV;{[QN]|[E{I|L}]|[KN]}KK{I|L}EQQ 7.3014;5.1391;2.6222;2.5003;0.77913 +;-;-;-;- + 168 1 2.261 69325.0 1.0 2980 4238 7217 SUDHL4_400M_050219_1,7220 SUDHL4_400M_050219_1,7220,RVIGTLEEV True True RVIGTLEEV 38.262798 508.293017566204 15796006.0 7217.0 ENSG00000100401|ENST00000356244|RANGAP1 5.414896329243978 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7221 38.265 95.0 510850.0 25 0 41944.0 + -1 QLADYCGLM 9 94 535.735455233702 1069.456357534204 2 535.7360717654228 MULTI CID FTMS 0 0 0 7217 279137.8125 0.3905644963260988 -3 0.2692756652832031 4 Carbamidomethyl (C) _QLADYC(Carbamidomethyl (C))GLM_ REV__ENSG00000143452|ENST00000361824|HORMAD1;REV__nc|ENSG00000143452|Q86X24-2|HORMAD1;REV__nc|ENSG00000143452|Q86X24-3|HORMAD1;REV__nc|ENSG00000143452|Q86X24-4|HORMAD1;REV__nc|ENSG00000143452|Q86X24-5|HORMAD1 7.910154910731844 0.6385446671287552 5 [Q{I|L}]A 3 -1 19.863 0.0 0.0 1.8573 0.0 0.0 0.0 754.2537873039884 754.2537873039884 5.883863177665635 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.3252574989159953 [Q{I|L}]A 1.8573 + + 67 1 2.261 45014.2 1.0 2981 4238 7217 SUDHL4_400M_050219_1,7221 SUDHL4_400M_050219_1,7221,QLADYCGLM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7222 38.277 672.0 202700.0 25 0 29175.0 -1 AIEPTCMSI 9 148 511.238955859137 1020.463358785074 2 511.2388793826103 MULTI CID FTMS 0 0 0 7217 93747.03125 0.8935355200180262 -1 0.0834693908691406 5 Carbamidomethyl (C) _AIEPTC(Carbamidomethyl (C))MSI_ ENST00000564440.5_1_15:72491378-72491480:-|nuORF 12.531546534597751 0.4974689918368763 5 M{[ES]|[DT]|[{I|L}C]}[RD]M[RP] 8 -1 + 17.452 0.0 0.0 1.7102 1.7102 82.981 0.0 0.0 0.0 4.977656990787697 0.6025547730509686 0.6025547730509686 17.451907099188166 0 0.5 0.0 0.4247425010840047 0.0 M{[ES]|[DT]|[{I|L}C]}[RD]M[RP] 1.7102 - 225 + 1 2.261 108063.4 1.0 2982 4238 7217 SUDHL4_400M_050219_1,7222 SUDHL4_400M_050219_1,7222,AIEPTCMSI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7223 38.29 800.0 229970.0 25 0 26028.0 + 18236 KVIDEIYRV 9 135 567.8304478718817 1133.6463428105633 2 567.8305541872978 MULTI CID FTMS 0 0 0 7217 85601.7421875 0.2492767417848732 -3 0.2692756652832031 6 Unmodified _KVIDEIYRV_ ENSG00000143756|ENST00000366862|FBXO28 73.1962812333195 0.0198633909068982 5 KV{I|L}DE{I|L}YRV 9 0 + 92.457 0.0 0.0 8.1557 8.1557 89.691 0.0 0.0 0.0 4.203103093438969 4.687200862615697 4.203103093438969 4.203103093438969 0 2.7104093769761874 1.0 0.7059771852360797 0.6109243748081782 + + KV{I|L}DE{I|L}YRV;VK{I|L}DE{I|L}YRV;KV{I|L}DE{I|L}[RV]Y;KVVEE{I|L}YRV;VK{I|L}DE{I|L}[RV]Y;VKVEE{I|L}YRV;KVVEE{I|L}[RV]Y;VKVEE{I|L}[RV]Y;KV{I|L}DEV[R{I|L}]Y;KV{I|L}VEEYRV 8.1557;7.785;7.7423;7.4491;7.3715;7.0784;7.0357;6.6649;6.5204;6.1872 +;-;-;-;-;-;-;-;-;- + 1123 + 1 2.261 141911.9 0.5400000214576721 2983 4238 7217 SUDHL4_400M_050219_1,7223 SUDHL4_400M_050219_1,7223,KVIDEIYRV True True KVIDEIYRV 38.290416 567.830554187298 4289189.75 7217.0 ENSG00000143756|ENST00000366862|FBXO28 5.909812927246094 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7225 38.295 62.0 849550.0 25 0 161540.0 + 20402 LLHALLSC 8 80 435.2508431776387 868.4871334220775 2 435.2509643435478 MULTI CID FTMS 0 0 0 7224 849979.1875 0.9138298498540792 -11 0.7449989318847656 1 Unmodified _LLHALLSC_ REV__ENSG00000170915|ENST00000442253|PAQR8 2.302733041254933 0.8103549651115762 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.261 48581.7 1.0 2984 4239 7224 SUDHL4_400M_050219_1,7225 SUDHL4_400M_050219_1,7225,LLHALLSC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7226 38.309 800.0 170360.0 25 0 12621.0 + 38955 TVNVGQDLAY 10 152 540.2721048696922 1078.5296568061842 2 540.2724487185478 MULTI CID FTMS 0 0 0 7224 139915.453125 0.2631226508136637 2 -0.0614013671875 2 Unmodified _TVNVGQDLAY_ REV__ENSG00000104889|ENST00000221486|RNASEH2A;REV__ENST00000590121.1_1_19:12917502-12918326:+|nuORF 38.17557092003332 0.1768326257063233 5 {NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}{I|L}AY 9 -1 + 60.217 0.0 0.0 5.5832 5.5832 79.937 0.0 0.0 0.0 0.6519170391168174 10.167118777434752 0.6519170391168174 0.6519170391168174 0 1.0 1.2218487496163564 0.9247425010840048 0.2887254899964357 {NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}{I|L}AY;{[TV]|[{I|L}S]}AQ[QA]D{I|L}AY;{[QN]|[E{I|L}]|[KN]}[DN]E{I|L}{I|L}AY;{[VA]|[{I|L}G]}[WD]E{I|L}{I|L}AY;{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}{I|L}S{M(Oxidation (M))|F};{[TV]|[{I|L}S]}AQ[QA]D{I|L}S{M(Oxidation (M))|F};{[TV]|[{I|L}S]}AQ[QA]VEAY;{[VA]|[{I|L}G]}TQ[QA]D{I|L}AY;{[QN]|[E{I|L}]|[KN]}[DN]E{I|L}{I|L}S{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}A{I|L}Y 5.5832;5.5228;5.3248;5.0571;4.6405;4.5801;4.4887;4.4082;4.3821;4.3757 -;-;-;-;-;-;-;-;-;- 486 1 2.261 105286.3 0.959999978542328 2985 4239 7224 SUDHL4_400M_050219_1,7226 SUDHL4_400M_050219_1,7226,TVNVGQDLAY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7227 38.313 182.0 406280.0 25 0 43669.0 + 30997 RLEDQVIGV 9 104 514.7905494920582 1027.5665460509165 2 514.7911865115166 MULTI CID FTMS 0 0 0 7224 271486.96875 0.6498822966871542 -2 0.1357307434082031 3 Unmodified _RLEDQVIGV_ ENSG00000060749|ENST00000650167|QSER1;nc|ENSG00000060749|Q2KHR3-2|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1 29.43715596616401 0.1566398223704148 5 {NN|[MP]|[D{I|L}]|[EV]}{[RE]|[WV]}QV{I|L}GV 9 2 + 69.173 0.0 0.0 6.7317 6.7317 91.913 0.0 0.0 0.0 12.961434083857526 43.9119038439304 12.961434083857526 9.208187539523747 0 1.6505149978319906 1.5228787452803376 0.0 0.5554621874040891 {NN|[MP]|[D{I|L}]|[EV]}{[RE]|[WV]}QV{I|L}GV;{NN|[MP]|[D{I|L}]|[EV]}{[RE]|[WV]}[AG]V{I|L}GV;{[TV]|[{I|L}S]}R{[SA]|[TG]}[EP]{I|L}GV;{[TV]|[{I|L}S]}D[QT]PV{I|L}R;{NN|[MP]|[D{I|L}]|[EV]}S[QT]PV{I|L}R;[VG][QP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GV;{[TV]|[{I|L}S]}[WK][EP]{I|L}GV;{NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C))R]PV{I|L}R;[NP]AV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GV;{[TV]|[{I|L}S]}D[KA][EP]{I|L}R 6.7317;5.8356;5.0466;5.0403;4.8244;4.7308;4.7039;4.4869;4.3889;4.0944 -;-;-;-;-;-;-;-;-;- 302 1 2.261 60694.5 1.0 2986 4239 7224 SUDHL4_400M_050219_1,7227 SUDHL4_400M_050219_1,7227,RLEDQVIGV False True RLEDQVIGV 38.312599 514.791186511517 2318446.5 7224.0 nc|ENSG00000060749|Q2KHR3-2|QSER1;;ENSG00000060749|ENST00000650167|QSER1;;nc|ENSG00000060749|Q2KHR3|QSER1 4.213773965835571 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7228 38.317 206.0 362200.0 25 0 43560.0 + 13014 HASDRIIAL 9 96 498.28547093473406 994.556388936268 2 498.2847473025322 MULTI CID FTMS 0 0 0 7224 200633.859375 0.2137723764345341 -5 0.4222946166992187 4 Unmodified _HASDRIIAL_ ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT 26.020703789607367 0.2001090068861241 5 HA 2 7 44.603 0.0 0.0 4.4847 0.0 0.0 0.0 783.4361852695397 783.4361852695397 17.251538419660218 0.0 0.0 0.0 0 0.6643943297944485 1.6989700043360187 0.0 0.0 + HA 4.4847 + + 42 + 1 2.261 64371.7 1.0 2987 4239 7224 SUDHL4_400M_050219_1,7228 SUDHL4_400M_050219_1,7228,HASDRIIAL False True HASDRIIAL 38.316518 498.284747302532 5041392.5 7224.0 ENST00000461139.5_1_3:53259774-53265639:-|nuORF;;nc|ENSG00000163931|P29401-2|TKT;;ENSG00000163931|ENST00000462138|TKT;;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;;ENST00000460343.5_1_3:53261754-53265639:-|nuORF 5.668056805928548 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7230 38.321 63.0 744600.0 25 0 93403.0 -1 0 65 632.9782656396939 1895.9129675192808 3 633.3127929568291 MULTI CID FTMS 0 0 0 7229 677254.5 1.0 0 0.0 1 5 KG{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 8 -1 44.399 0.0 0.0 2.3418 0.0 0.0 967.3923207013688 0.0 967.3923207013688 0.0 14.73320034371433 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 KG{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 2.3418 - 93 1 2.261 42285.9 1.0 2988 4240 7229 SUDHL4_400M_050219_1,7230 SUDHL4_400M_050219_1,7230, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7231 38.328 375.0 213790.0 25 0 18459.0 29321 QILPGATP 8 127 398.7306386681032 795.4467244030063 2 398.7304870486259 MULTI CID FTMS 0 0 0 7229 111016.84375 1.0 0 0.0 2 Unmodified _QILPGATP_ ENSG00000187391|ENST00000354212|MAGI2;nc|ENSG00000187391|Q86UL8-2|MAGI2 8.593279151180031 0.7721714526254883 5 V 1 8 8.0989 0.0 0.0 1.0182 0.0 0.0 678.3674606474384 0.0 678.3674606474384 0.0 6.109243748081781 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0182 - 26 + 1 2.261 66303.6 1.0 2989 4240 7229 SUDHL4_400M_050219_1,7231 SUDHL4_400M_050219_1,7231,QILPGATP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7232 38.335 396.0 313980.0 25 0 31758.0 + 35156 SRPDSILGMQF 11 119 625.8136389311055 1249.612724929011 2 625.8138915896416 MULTI CID FTMS 0 0 0 7229 266694.40625 0.1806509472096311 -4 0.2425880432128906 3 Unmodified _SRPDSILGMQF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 51.629811660486645 0.1086041609037681 5 [AG]K{I|L}QEQAMQ{M(Oxidation (M))|F} 11 -1 + 94.594 0.0 0.0 7.5699 7.5699 87.883 0.0 0.0 0.0 12.104192878355748 16.57577319177794 12.104192878355748 3.265140508858366 0 1.0044321917401078 1.6989700043360187 0.7614393726401688 2.31295299324845 [AG]K{I|L}QEQAMQ{M(Oxidation (M))|F};[AG]{I|L}KQEQAMQ{M(Oxidation (M))|F};[AG]EQ{I|L}KQAMQ{M(Oxidation (M))|F};[AG]K{I|L}AGEQAMQ{M(Oxidation (M))|F};[AG]EAG{I|L}KQAMQ{M(Oxidation (M))|F};[AG]EQA{I|L}[KG]AMQ{M(Oxidation (M))|F};[AG]EQ{I|L}A[KG]AMQ{M(Oxidation (M))|F};[AG]{I|L}KAGEQAMQ{M(Oxidation (M))|F};[AG]EAG{I|L}A[KG]AMQ{M(Oxidation (M))|F};[AG]EAQ{I|L}[KG]AMQ{M(Oxidation (M))|F} 7.5699;7.3086;7.2585;7.2354;7.1818;7.1408;7.0098;6.9741;6.9355;6.9168 -;-;-;-;-;-;-;-;-;- 4665 1 2.261 96577.3 1.0 2990 4240 7229 SUDHL4_400M_050219_1,7232 SUDHL4_400M_050219_1,7232,SRPDSILGMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7233 38.343 433.0 211430.0 25 0 19798.0 -1 QDGLCCPGPR 10 107 580.253871772118 1158.493190611036 2 580.2551757693291 MULTI CID FTMS 0 0 0 7229 201807.328125 1.0 0 0.0 4 2 Carbamidomethyl (C) _QDGLC(Carbamidomethyl (C))C(Carbamidomethyl (C))PGPR_ ENST00000546949.5_1_19:58514261-58515786:+|nuORF;ENST00000550135.5_1_19:58514063-58517364:+|nuORF 9.38312468134398 0.6832340498775793 5 MSTNG{I|L}PR 8 -1 74.175 0.0 0.0 6.4027 0.0 0.0 284.0631501831047 0.0 284.0631501831047 0.0 47.21253489819958 0.0 0.0 0 1.1307196863200843 0.0 0.3494850021680094 1.424742501084005 MSTNG{I|L}PR 6.4027 - 244 + 1 2.261 71508.9 1.0 2991 4240 7229 SUDHL4_400M_050219_1,7233 SUDHL4_400M_050219_1,7233,QDGLCCPGPR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7234 38.351 436.0 265640.0 25 0 24500.0 + 18238 KVIDEIYRV 9 140 378.88842154758896 1133.643435242967 3 378.8884460330009 MULTI CID FTMS 0 0 0 7229 134397.78125 0.9861166841462524 -3 0.1618194580078125 5 Unmodified _KVIDEIYRV_ ENSG00000143756|ENST00000366862|FBXO28 27.628801355627647 0.1796483985696185 5 [{I|L}T][Q{I|L}]E{I|L}YVR 9 5 [{I|L}T][Q{I|L}]E + + 26.133 14.053 2.4051 2.3052 2.3052 53.185 0.0 0.0 0.0 0.0 12.07956914599634 0.0 0.0 0 0.5 0.0 0.0 0.3252574989159953 [{I|L}T][Q{I|L}]E{I|L}YVR 2.3052 - 263 + 1 2.261 94802.0 1.0 2992 4240 7229 SUDHL4_400M_050219_1,7234 SUDHL4_400M_050219_1,7234,KVIDEIYRV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7235 38.352 43.0 1340500.0 25 0 178880.0 + 9473 FLDEPTNHL 9 88 543.2672221997284 1084.5198914662567 2 543.2671996951103 MULTI CID FTMS 0 0 0 7229 664174.25 0.4775280530298135 -3 0.1618194580078125 6 Unmodified _FLDEPTNHL_ ENSG00000033050|ENST00000287844|ABCF2;ENST00000465687.1_1_3:88367908-88368169:+|nuORF;nc|ENSG00000285292|Q9UG63-2|ABCF2 65.23502041540118 0.0231836506122253 5 {M(Oxidation (M))|F}{I|L}DE[TP]N[H{I|L}] 9 0 + 57.999 0.0 0.0 5.3479 5.3479 89.916 0.0 0.0 0.0 46.37009080640346 3.837258228914706 3.837258228914706 12.825834421237516 0 0.8807196863200843 0.0 1.2614393726401687 0.8494850021680094 + + {M(Oxidation (M))|F}{I|L}DE[TP]N[H{I|L}];[TP][HN]{I|L}{M(Oxidation (M))|F}D{I|L}E;[HN][TP]{I|L}{M(Oxidation (M))|F}D{I|L}E;{M(Oxidation (M))|F}{I|L}{I|L}{[{M(Oxidation (M))|F}D]|MM}Q[R{M(Oxidation (M))|F}];[WY][{I|L}T]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}E;{M(Oxidation (M))|F}{I|L}DE[TP]GG[H{I|L}];{M(Oxidation (M))|F}{I|L}D{[QS]|[NT]}EP[H{I|L}];{M(Oxidation (M))|F}{I|L}{I|L}{[{M(Oxidation (M))|F}D]|MM}[AG][R{M(Oxidation (M))|F}];[WY][{I|L}T]Q[{M(Oxidation (M))|F}V]E;{M(Oxidation (M))|F}{I|L}D{[QS]|[NT]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QN]|[E{I|L}]|[KN]} 5.3479;4.1652;4.1652;3.9302;3.7561;3.7155;3.3321;3.0762;2.6624;2.5252 +;-;-;-;-;-;-;-;-;- + 394 + 1 2.261 49383.3 1.0 2993 4240 7229 SUDHL4_400M_050219_1,7235 SUDHL4_400M_050219_1,7235,FLDEPTNHL True True FLDEPTNHL 38.35183 543.26719969511 17184988.0 7229.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2;;ENST00000465687.1_1_3:88367908-88368169:+|nuORF 6.271964867909749 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7237 38.36 250.0 318790.0 25 0 51225.0 39492 VARRERAV 8 104 478.7924524321911 955.5703519311822 2 478.7923156619072 MULTI CID FTMS 0 0 0 7236 120928.265625 0.0623972422763246 5 -0.1854629516601562 1 Unmodified _VARRERAV_ ENSG00000164403|ENST00000378679|SHROOM1;nc|ENSG00000164403|Q2M3G4-2|SHROOM1 14.581692164780916 0.6954967302934248 5 {[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}K{I|L}VAV 9 6 + 37.909 0.0 0.0 3.9671 3.9671 85.216 0.0 0.0 0.0 1.1709124234504102 23.929183915561453 1.1709124234504102 10.413926851582248 0 0.9826446478103829 0.0 0.0 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}K{I|L}VAV;{[QD]|[EN]|[WG]|[KD]|[RS]}AK{I|L}{I|L}VAV 3.9671;2.8773 -;- 125 1 2.277 64517.1 1.0 2994 4241 7236 SUDHL4_400M_050219_1,7237 SUDHL4_400M_050219_1,7237,VARRERAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7238 38.365 248.0 348770.0 25 0 24462.0 + 39980 VGAVAAYL 8 130 382.22092792327993 762.4273029133599 2 382.2202636599541 MULTI CID FTMS 0 0 0 7236 153822.109375 0.3406462157448582 4 -0.1401329040527343 2 Unmodified _VGAVAAYL_ REV__ENST00000393633.6_1_7:75039650-75039779:+|nuORF;REV__ENST00000473960.1_1_7:75039650-75040029:+|nuORF;REV__ENST00000485741.6_1_7:72424205-72425256:-|nuORF 2.889219685676258 0.8067950007271085 5 V 1 -1 7.6731 0.0 0.0 1.0064 0.0 0.0 645.348283298417 0.0 645.348283298417 0.0 5.198835634357439 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0064 + + 22 + 1 2.277 70401.8 1.0 2995 4241 7236 SUDHL4_400M_050219_1,7238 SUDHL4_400M_050219_1,7238,VGAVAAYL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7239 38.367 111.0 554760.0 25 0 63911.0 + 13351 HLFETISQA 9 79 523.2696439136151 1044.5247348940302 2 523.2693359255791 MULTI CID FTMS 0 0 0 7236 358915.5625 0.2368108930266867 -5 0.2779006958007812 3 Unmodified _HLFETISQA_ ENSG00000277791|ENST00000619426|PSMB3 57.47134341890925 0.0274820932774257 5 [H{I|L}]{M(Oxidation (M))|F}ET{I|L} 6 3 46.916 0.0 0.0 4.4916 0.0 0.0 0.0 301.1176053376427 301.1176053376427 30.71842196392843 0.0 0.0 0.0 0 0.3807196863200844 1.2218487496163564 0.8494850021680094 0.0 + [H{I|L}]{M(Oxidation (M))|F}ET{I|L} 4.4916 + + 102 1 2.277 53631.1 1.0 2996 4241 7236 SUDHL4_400M_050219_1,7239 SUDHL4_400M_050219_1,7239,HLFETISQA True True HLFETISQA 38.367316 523.269335925579 18132800.0 7236.0 ENSG00000277791|ENST00000619426|PSMB3;;chr17:38760582-38762411|14|73.21|0.86|6.41|+|0|None,PSMB3|1 7.017154852549235 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7240 38.381 800.0 134150.0 25 0 5669.8 + 31982 RVFPEKGYSF 10 113 615.3193683525769 1228.6241837719538 2 615.8207275271416 MULTI CID FTMS 0 0 0 7236 94117.3125 0.4931243485462286 -5 0.2779006958007812 4 Unmodified _RVFPEKGYSF_ ENSG00000151923|ENST00000436547|TIAL1;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000151923|Q01085-2|TIAL1 26.020703789607367 0.3840598856887971 5 C(Carbamidomethyl (C))GYS{M(Oxidation (M))|F} 5 6 39.993 0.0 0.0 3.2551 0.0 0.0 596.3878742020529 0.0 596.3878742020529 0.0 23.593122257948234 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 C(Carbamidomethyl (C))GYS{M(Oxidation (M))|F} 3.2551 - 387 1 2.277 81783.5 0.5699999928474426 2997 4241 7236 SUDHL4_400M_050219_1,7240 SUDHL4_400M_050219_1,7240,RVFPEKGYSF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7241 38.389 459.0 233420.0 25 0 25039.0 11702 GLGGRQSQF 9 136 475.2472358820932 948.4799188309864 2 475.2471801638603 MULTI CID FTMS 0 0 0 7236 85846.9296875 0.6992203803355815 -2 0.0614013671875 5 Unmodified _GLGGRQSQF_ ENSG00000249581|ENST00000511148|CLRN2 10.823927491677226 0.5436922275383211 5 {[VA]|[{I|L}G]}{I|L} 3 7 33.2 0.0 0.0 3.5003 0.0 0.0 0.0 662.2685219858296 662.2685219858296 4.325899953472643 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L} 3.5003 - 138 + 1 2.277 82463.0 1.0 2998 4241 7236 SUDHL4_400M_050219_1,7241 SUDHL4_400M_050219_1,7241,GLGGRQSQF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7243 38.395 131.0 316070.0 25 0 23681.0 + -1 LHLGLGVM 8 78 428.242954561548 854.471356189896 2 428.2430297732353 MULTI CID FTMS 0 0 0 7242 230903.84375 0.6268178883762202 -8 0.5211563110351562 1 Oxidation (M) _LHLGLGVM(Oxidation (M))_ REV__ENST00000609015.5_2_3:193767133-193776214:-|nuORF 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.277 38495.4 1.0 2999 4242 7242 SUDHL4_400M_050219_1,7243 SUDHL4_400M_050219_1,7243,LHLGLGVM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7244 38.397 141.0 536820.0 25 0 39379.0 + + 7657 RQNIGVATF 9 123 502.7768168961299 1003.5390808590598 2 503.2792541384697 MULTI CID FTMS 0 0 0 7242 274629.21875 0.733555806228718 -2 0.0727729797363281 2 Unmodified _EKIKMEQV_ ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4 13.042465956692816 0.7182358012947757 5 T{M(Oxidation (M))|F} 2 -1 19.196 0.0 0.0 1.9128 0.0 0.0 737.4118968764411 0.0 737.4118968764411 0.0 0.3169528088215507 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 T{M(Oxidation (M))|F} 1.9128 - 542 + 1 2.277 59560.2 1.0 3000 4242 7242 SUDHL4_400M_050219_1,7244 SUDHL4_400M_050219_1,7244,EKIKMEQV False False RQNIGVATF 38.397336 503.27925413847 1759440.5 7242.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 2.2425793210665383 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7245 38.399 30.0 2015700.0 25 0 206690.0 + 1775 ALSDHHIYL 9 88 534.7772920128829 1067.5400310925656 2 534.7776977419853 MULTI CID FTMS 0 0 0 7242 1290243.25 0.1945460257367531 -4 0.151123046875 3 Unmodified _ALSDHHIYL_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 56.541270873467816 0.0279970378729908 5 [{I|L}A]{[DS]|[MA]|[CV]|TT}HH{I|L}Y{I|L} 9 0 + 37.87 0.0 0.0 3.5474 3.5474 73.79 0.0 0.0 0.0 4.079853937541742 0.5115252244738144 0.5115252244738144 0.5115252244738144 0 1.274227503252014 2.0 0.4247425010840047 0.0 + + [{I|L}A]{[DS]|[MA]|[CV]|TT}HH{I|L}Y{I|L};[{I|L}A]{[DS]|[MA]|[CV]|TT}HH{I|L}{I|L}Y 3.5474;3.4995 +;- + 241 + 1 2.277 50290.7 1.0 3001 4242 7242 SUDHL4_400M_050219_1,7245 SUDHL4_400M_050219_1,7245,ALSDHHIYL True True ALSDHHIYL 38.398515 534.777697741985 113482504.0 7242.0 nc|ENSG00000149925|P04075|ALDOA;;ENSG00000149925|ENST00000642816|ALDOA 5.90573263168335 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7246 38.4 55.0 1629400.0 25 0 128870.0 + 31139 RLNKVISEL 9 111 536.3292369349047 1070.6439209366092 2 536.3296996951103 MULTI CID FTMS 0 0 0 7242 1050247.25 0.3693353125045606 -3 0.0988616943359375 4 Unmodified _RLNKVISEL_ ENSG00000177600|ENST00000321153|RPLP2;ENST00000524867.1_1_11:810234-811767:+|nuORF 53.832793166522166 0.0319663582346103 5 {[QN]|[E{I|L}]|[KN]}[R{I|L}]V{I|L}SE{I|L} 9 3 + 58.329 0.0 0.0 5.4481 5.4481 85.969 0.0 0.0 0.0 5.954387282529794 44.83439878446104 5.954387282529794 6.7609125905568135 0 1.3754223615525998 0.0 1.4731975075880328 0.0 {[QN]|[E{I|L}]|[KN]}[R{I|L}]V{I|L}SE{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]VTVE{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]VS{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]VTD{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]VSE{I|L}{I|L};[AG][RV]KV{I|L}SE{I|L};[{I|L}V]{[NV]|[RG]}[KG]{I|L}SE{I|L};[AG][RV]KVTVE{I|L};{[TV]|[{I|L}S]}[KP]T[RK]E{I|L};[AG][RV]KVS{I|L}E{I|L} 5.4481;4.8166;4.6999;4.2221;4.1054;3.3923;2.9278;2.7608;2.6572;2.6442 -;-;-;-;-;-;-;-;-;- 633 1 2.277 71543.7 1.0 3002 4242 7242 SUDHL4_400M_050219_1,7246 SUDHL4_400M_050219_1,7246,RLNKVISEL True True RLNKVISEL 38.399926 536.3306 29502438.0 7242.0 ENSG00000177600|ENST00000321153|RPLP2;;ENST00000524867.1_1_11:810234-811767:+|nuORF 5.131336688995361 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7247 38.402 108.0 873320.0 25 0 155610.0 + 1778 ALSDHHIYL 9 106 356.85413552731245 1067.5405771821374 3 356.8538696169853 MULTI CID FTMS 0 0 0 7242 370614.28125 0.1786032669982217 -4 0.151123046875 5 Unmodified _ALSDHHIYL_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 30.22481116460888 0.1466181017706357 5 H{I|L}A{I|L}Y{I|L} 6 5 26.872 0.0 0.0 2.5172 0.0 0.0 339.1183949201188 0.0 339.1183949201188 0.0 12.26789385964942 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 H{I|L}A{I|L}Y{I|L} 2.5172 - 141 1 2.277 79162.7 1.0 3003 4242 7242 SUDHL4_400M_050219_1,7247 SUDHL4_400M_050219_1,7247,ALSDHHIYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7248 38.407 277.0 282310.0 25 0 42618.0 + -1 KILEELQKV 9 110 548.3285621920764 547.3212857254764 1 550.3397094607353 MULTI CID FTMS 0 0 0 7242 160475.21875 0.5061150225441253 -2 0.0727729797363281 6 nc|ENSG00000132466|O75179-4|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-7|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17 5 [K{I|L}]DQ 4 -1 11.368 0.0 0.0 2.077 0.0 0.0 0.0 60.0436727706514 60.0436727706514 1.3680666446502483 0.0 0.0 0.0 0 0.0 0.6575773191777937 0.0 0.2396518287104437 [K{I|L}]DQ 2.077 - 85 1 2.277 68838.8 1.0 3004 4242 7242 SUDHL4_400M_050219_1,7248 SUDHL4_400M_050219_1,7248, False False KILEELQKV 38.407318 550.3402 1619493.125 7242.0 nc|ENSG00000132466|O75179-4|ANKRD17;;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;;nc|ENSG00000132466|O75179-7|ANKRD17;;nc|ENSG00000132466|O75179-2|ANKRD17;;ENSG00000132466|ENST00000358602|ANKRD17;;nc|ENSG00000132466|O75179-3|ANKRD17 1.5095129013061523 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7249 38.411 163.0 426170.0 25 0 44970.0 + 2058 APLPPHLPGA 10 107 485.2792959137977 968.5440388943954 2 485.2792541384697 MULTI CID FTMS 0 0 0 7242 134340.65625 0.4682441670181211 51 -2.411529541015625 7 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 18.13498045792455 0.5432546531930572 5 [PA]{I|L}Y{I|L} 5 6 28.768 0.0 0.0 2.9702 0.0 0.0 0.0 408.1878126583204 408.1878126583204 14.163413326259118 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [PA]{I|L}Y{I|L} 2.9702 - 125 1 2.277 60557.8 1.0 3005 4242 7242 SUDHL4_400M_050219_1,7249 SUDHL4_400M_050219_1,7249,APLPPHLPGA False True False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 7250 38.415 218.0 340090.0 25 0 31258.0 + 11471 GIHTGQFVY 9 96 511.2592391315202 1020.5039253298404 2 511.2591430544853 MULTI CID FTMS 0 0 0 7242 95264.3203125 0.1757617532805082 -4 0.151123046875 8 Unmodified _GIHTGQFVY_ ENSG00000161016|ENST00000528957|RPL8;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;ENST00000531767.1_1_8:146017155-146017514:-|nuORF 20.453626601364224 0.2830276176381075 5 [{I|L}A][HS]{[QG]|[NA]}{M(Oxidation (M))|F}VY 9 2 [{I|L}A][HS]{[QG]|[NA]}{M(Oxidation (M))|F} + + 24.464 0.53105 0.071729 2.3972 2.3972 53.265 0.0 0.0 0.0 0.0 10.194590330151849 0.0 0.0 0 0.5 0.0 0.0 0.0 [{I|L}A][HS]{[QG]|[NA]}{M(Oxidation (M))|F}VY 2.3972 - 141 + 1 2.277 61269.2 1.0 3006 4242 7242 SUDHL4_400M_050219_1,7250 SUDHL4_400M_050219_1,7250,GIHTGQFVY False True GIHTGQFVY 38.41464 511.259143054485 2629942.25 7242.0 ENST00000531767.1_1_8:146017155-146017514:-|nuORF;;ENSG00000161016|ENST00000528957|RPL8;;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;;chr8:144790470-144791773|11|189.18|0.81|7.86|-|2|RPL8,RPL8|1 5.753873984018962 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7251 38.417 104.0 817360.0 25 0 240880.0 + 7471 EGRLVGHDQL 10 92 375.2013777848676 0 375.2012206912041 PEAK CID FTMS 0 0 0 7242 483295.46875 0.8996689501820867 1 -0.0326194763183593 9 Unmodified _EGRLVGHDQL_ REV__ENST00000336517.8_2_7:76058935-76062799:+|nuORF 8.155526934196011 0.3888059682493408 5 T 1 -1 5.4846 0.0 0.0 0.73285 0.0 0.0 192.0907305679789 452.2269991510376 644.3177297190165 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.73285 - 6 + 1 2.277 72079.7 1.0 3007 4242 7242 SUDHL4_400M_050219_1,7251 SUDHL4_400M_050219_1,7251,EGRLVGHDQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7252 38.422 275.0 347640.0 25 0 103260.0 33658 SITPAHWK 8 97 470.2571219529725 0 470.2570678591728 PEAK CID FTMS 0 0 0 7242 142664.640625 0.6404835597960759 -2 0.0727729797363281 10 Unmodified _SITPAHWK_ chr19:58306216-58312169|16|11.12|0.0|20.09|+|2|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,acceptor,+,58312169,58313278|ZNF8-ERVK3-1,None|9;chr19:58306216-58312266|18|11.0|0.0|20.07|+|1|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,acceptor,+,58312266,58313278|ZNF8-ERVK3-1,None|7 8.593279151180031 0.5573742999696857 5 S 1 7 4.6041 0.0 0.0 0.49058 0.0 0.0 766.378274812392 82.06686578922108 848.445140601613 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + S 0.49058 + + 20 + 1 2.277 78262.3 1.0 3008 4242 7242 SUDHL4_400M_050219_1,7252 SUDHL4_400M_050219_1,7252,SITPAHWK False False False False TE_chimeric_transcript PXD020620_cell_line SUDHL4_400M_050219_1 7254 38.429 166.0 477140.0 25 0 61228.0 40668 VLEQALAP 8 112 420.7434663776574 0 420.7435485720634 PEAK CID FTMS 0 0 0 7253 422742.1875 0.950824765056966 4 -0.1339988708496093 1 Unmodified _VLEQALAP_ ENST00000361028.5_1_6:28349926-28350043:-|nuORF;ENST00000396827.3_1_6:28348556-28350043:-|nuORF 0.7936320650641473 0.5979579398327216 5 H 1 8 4.7763 0.0 0.0 0.56896 0.0 0.0 420.23481375941793 279.14530785757825 699.3801216169961 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 H 0.56896 - 1 + 1 2.281 65916.9 1.0 3009 4243 7253 SUDHL4_400M_050219_1,7254 SUDHL4_400M_050219_1,7254,VLEQALAP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7255 38.431 119.0 406440.0 25 0 52657.0 12859 GVVPCNILV 9 90 457.2642548034081 912.513956673616 2 457.2648498415947 MULTI CID FTMS 0 0 0 7253 308795.125 0.8248124076395181 4 -0.1339988708496093 2 Unmodified _GVVPCNILV_ ENSG00000111897|ENST00000339697|SERINC1 4.3292370932331545 0.7635526921153418 5 {I|L} 1 8 10.837 0.0 0.0 1.1876 0.0 0.0 781.4192739117005 0.0 781.4192739117005 0.0 -7.121344736971933 -7.121344736971933 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1876 + + 13 + 1 2.281 42108.0 1.0 3010 4243 7253 SUDHL4_400M_050219_1,7255 SUDHL4_400M_050219_1,7255,GVVPCNILV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7256 38.436 214.0 428800.0 25 0 30180.0 + 30402 RAVAPTMSL 9 117 473.26300013706367 944.5114473409274 2 473.2624999880791 MULTI CID FTMS 0 0 0 7253 187025.265625 0.1897942691142422 -3 0.1053924560546875 3 Unmodified _RAVAPTMSL_ ENSG00000144560|ENST00000430365|VGLL4;nc|ENSG00000144560|Q14135-2|VGLL4;nc|ENSG00000144560|Q14135-4|VGLL4;nc|ENSG00000144560|Q14135-5|VGLL4;nc|ENSG00000144560|Q14135-6|VGLL4;nc|ENSG00000144560|Q14135|VGLL4 24.020572477871973 0.2255576514309169 5 [{M(Oxidation (M))|F}V]M{I|L}GA 6 8 29.983 0.0 0.0 3.1745 0.0 0.0 0.0 323.18439661197505 323.18439661197505 7.235834254131106 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [{M(Oxidation (M))|F}V]M{I|L}GA 3.1745 - 279 + 1 2.281 76404.7 1.0 3011 4243 7253 SUDHL4_400M_050219_1,7256 SUDHL4_400M_050219_1,7256,RAVAPTMSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7257 38.439 152.0 556400.0 25 0 29473.0 + 2979 AVIEHLERL 9 116 360.5448900380992 1078.6128407144977 3 360.5449401736259 MULTI CID FTMS 0 0 0 7253 178838.015625 0.5739380927294264 -1 0.0326194763183593 4 Unmodified _AVIEHLERL_ ENSG00000257218|ENST00000551765|GATC 19.361941925380144 0.3125782356748823 5 {[VA]|[{I|L}G]}{I|L}EH{I|L}{I|L}{[RE]|[WV]} 9 2 + 66.009 0.0 0.0 6.1198 6.1198 81.582 0.0 0.0 0.0 27.147642715192504 0.8398012892939448 0.8398012892939448 0.8398012892939448 0 0.2887254899964357 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}{I|L}EH{I|L}{I|L}{[RE]|[WV]};{[VA]|[{I|L}G]}{I|L}EH{I|L}ER{I|L};{[VA]|[{I|L}G]}{I|L}E{I|L}H{I|L}{[RE]|[WV]};{[VA]|[{I|L}G]}{I|L}E{I|L}HER{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}EH{I|L}{[RE]|[WV]};{[VA]|[{I|L}G]}{I|L}{I|L}EHER{I|L} 6.1198;6.0419;5.8407;5.7628;5.5616;5.4837 -;+;-;-;-;- + 198 + 1 2.281 75171.6 1.0 3012 4243 7253 SUDHL4_400M_050219_1,7257 SUDHL4_400M_050219_1,7257,AVIEHLERL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7258 38.448 557.0 214130.0 25 0 16091.0 + 2980 AVIEHLERL 9 118 540.3138614977483 1078.6131700622966 2 540.3152343630791 MULTI CID FTMS 0 0 0 7253 127107.2890625 0.8298273614535345 -1 0.0326194763183593 5 Unmodified _AVIEHLERL_ ENSG00000257218|ENST00000551765|GATC 49.52724829834842 0.0414064571532091 5 {I|L}G{I|L}EH{I|L}ER{I|L} 9 2 + 98.821 0.0 0.0 9.1619 9.1619 92.639 0.0 0.0 0.0 75.35322504083197 11.29924602543241 11.29924602543241 6.817496819840656 0 1.8193415193665468 2.0 0.805462187404089 0.0 {I|L}G{I|L}EH{I|L}ER{I|L};AV{I|L}EH{I|L}ER{I|L};{I|L}G{I|L}E{I|L}HER{I|L};{I|L}G{I|L}{I|L}EHER{I|L};AV{I|L}E{I|L}HER{I|L};AV{I|L}{I|L}EHER{I|L};{I|L}G{I|L}[KQ][HD]R{I|L};AV{I|L}[KQ][HD]R{I|L};{I|L}G{I|L}{I|L}[R{M(Oxidation (M))|F}][{M(Oxidation (M))|F}T]{I|L};{I|L}G{I|L}KK{[WT]|[RM]}AY 9.1619;8.5298;8.2917;7.8493;7.6596;7.2172;6.9074;6.2753;5.697;5.3441 -;+;-;-;-;-;-;-;-;- + 642 + 1 2.281 93651.7 1.0 3013 4243 7253 SUDHL4_400M_050219_1,7258 SUDHL4_400M_050219_1,7258,AVIEHLERL True True AVIEHLERL 38.448338 540.315234363079 1826691.5 7253.0 ENSG00000257218|ENST00000551765|GATC 4.297893365224202 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7259 38.462 800.0 94698.0 25 0 4511.3 + 26037 NMLEQYEHLQW 11 102 745.8409228626323 1489.6672927920645 2 746.3421508669853 MULTI CID FTMS 0 0 0 7253 99897.609375 1.0 0 0.0 6 Unmodified _NMLEQYEHLQW_ REV__CON__REFSEQ:XP_092267 5.296884461304476 0.8501568894076437 5 {NN|[MP]|[D{I|L}]|[EV]}S{I|L}GC{M(Oxidation (M))|F}AN{I|L}DP[EP] 14 -1 + 67.385 0.0 0.0 4.5235 4.5235 76.461 0.0 0.0 0.0 4.557678432647592 7.569619513137056 4.557678432647592 0.5237875363565792 0 0.0 1.2218487496163564 0.8494850021680094 1.0501648626366045 {NN|[MP]|[D{I|L}]|[EV]}S{I|L}GC{M(Oxidation (M))|F}AN{I|L}DP[EP];{NN|[MP]|[D{I|L}]|[EV]}SVAC{M(Oxidation (M))|F}AN{I|L}DP[EP];{NN|[MP]|[D{I|L}]|[EV]}S{I|L}C(Carbamidomethyl (C)){M(Oxidation (M))|F}AN{I|L}DP[EP];[NP]{I|L}N[C(Carbamidomethyl (C))H]AN{I|L}DP[EP];{NN|[MP]|[D{I|L}]|[EV]}VTGC{M(Oxidation (M))|F}AN{I|L}DP[EP];{NN|[MP]|[D{I|L}]|[EV]}VSAC{M(Oxidation (M))|F}AN{I|L}DP[EP];{NN|[MP]|[D{I|L}]|[EV]}SAVC{M(Oxidation (M))|F}AN{I|L}DP[EP];{NN|[MP]|[D{I|L}]|[EV]}VTC(Carbamidomethyl (C)){M(Oxidation (M))|F}AN{I|L}DP[EP];{NN|[MP]|[D{I|L}]|[EV]}S{I|L}GC{M(Oxidation (M))|F}AN{I|L}DV[HS];{NN|[MP]|[D{I|L}]|[EV]}S{I|L}GC{M(Oxidation (M))|F}AGG{I|L}DP[EP] 4.5235;4.4883;4.3131;4.2176;4.2032;4.1681;4.0011;3.9929;3.9181;3.916 -;-;-;-;-;-;-;-;-;- 6279 1 2.281 60047.6 0.5899999737739563 3014 4243 7253 SUDHL4_400M_050219_1,7259 SUDHL4_400M_050219_1,7259,NMLEQYEHLQW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7260 38.472 535.0 140740.0 25 0 12930.0 + 44372 YLSQPRLTY 9 92 570.8065228402438 0 570.8061401247978 PEAK CID FTMS 0 0 0 7253 81956.984375 0.8381264880239042 -1 0.0326194763183593 7 Unmodified _YLSQPRLTY_ ENSG00000147416|ENST00000276390|ATP6V1B2;ENST00000523482.5_1_8:20054917-20070443:+|nuORF 27.628801355627647 0.1319135480000405 5 {I|L}SQP 4 5 27.295 0.0 0.0 2.3951 0.0 0.0 163.07067399904378 548.2716158502561 711.3422898493 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {I|L}SQP 2.3951 + + 57 + 1 2.281 61404.0 1.0 3015 4243 7253 SUDHL4_400M_050219_1,7260 SUDHL4_400M_050219_1,7260,YLSQPRLTY False True YLSQPRLTY 38.471601 570.806140124798 546363.6875 7253.0 ENSG00000147416|ENST00000276390|ATP6V1B2;;ENST00000523482.5_1_8:20054917-20070443:+|nuORF 5.151651382446289 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7261 38.473 50.0 971160.0 25 0 252100.0 -1 0 75 412.2281995384317 411.22092307183175 1 412.2304565310478 MULTI CID FTMS 0 0 0 7253 797574.625 0.7753944662917251 4 -0.1339988708496093 8 5 G 1 -1 0.9691 0.0 0.0 0.23566 0.0 0.0 202.1544690696817 149.0247744195922 351.179243489274 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.23566 - 1 + 1 2.281 43766.2 1.0 3016 4243 7253 SUDHL4_400M_050219_1,7261 SUDHL4_400M_050219_1,7261, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7263 38.478 129.0 467080.0 25 0 69898.0 + 9501 FLDPNNIPKA 10 62 564.806119932084 1127.597686930968 2 564.8058959841728 MULTI CID FTMS 0 0 0 7262 401446.53125 0.6214834436394057 3 -0.0829734802246093 1 Unmodified _FLDPNNIPKA_ ENSG00000159063|ENST00000299626|ALG8;ENST00000532552.2_1_11:77817934-77820625:-|nuORF;nc|ENSG00000159063|Q9BVK2-2|ALG8 26.268140514670165 0.3785003716575977 5 N{I|L}D[WK]{[QN]|[E{I|L}]|[KN]} 7 6 21.373 0.0 0.0 1.8955 0.0 0.0 211.0963307111344 0.0 211.0963307111344 0.0 8.898999383748443 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.6139829889124311 N{I|L}D[WK]{[QN]|[E{I|L}]|[KN]} 1.8955 - 130 1 2.281 51611.9 1.0 3017 4244 7262 SUDHL4_400M_050219_1,7263 SUDHL4_400M_050219_1,7263,FLDPNNIPKA False True FLDPNNIPKA 38.478121 564.805895984173 8627044.0 7262.0 ENSG00000159063|ENST00000299626|ALG8;;ENST00000532552.2_1_11:77817934-77820625:-|nuORF;;nc|ENSG00000159063|Q9BVK2-2|ALG8 6.597506046295166 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7264 38.492 800.0 174720.0 25 0 29439.0 + 17480 KPGAPGPL 8 131 736.4329300563052 735.4256535897051 1 736.4337036013603 MULTI CID FTMS 0 0 0 7262 204409.453125 0.1069749117098748 -5 0.1825065612792968 2 Unmodified _KPGAPGPL_ REV__ENSG00000204248|ENST00000341947|COL11A2;REV__nc|ENSG00000204248|P13942-2|COL11A2;REV__nc|ENSG00000204248|P13942-3|COL11A2;REV__nc|ENSG00000204248|P13942-4|COL11A2;REV__nc|ENSG00000204248|P13942-5|COL11A2;REV__nc|ENSG00000204248|P13942-6|COL11A2;REV__nc|ENSG00000204248|P13942-7|COL11A2;REV__nc|ENSG00000204248|P13942-8|COL11A2;REV__nc|ENSG00000204248|P13942|COL11A2 2.302733041254933 0.8103549651115762 5 H 1 -1 9.0344 0.0 0.0 1.2285 0.0 0.0 580.3592301051333 0.0 580.3592301051333 0.0 9.134421988102138 0.0 0.0 0 0.0 0.0 0.0 0.0 H 1.2285 - 18 + 1 2.281 111300.6 0.699999988079071 3018 4244 7262 SUDHL4_400M_050219_1,7264 SUDHL4_400M_050219_1,7264,KPGAPGPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7266 38.498 196.0 298830.0 25 0 48538.0 + 37453 TLDVQIQHV 9 105 526.7893966727524 1051.5642404123048 2 526.7908203005791 MULTI CID FTMS 0 0 0 7265 205519.421875 0.9871225402975032 -2 0.0700531005859375 1 Unmodified _TLDVQIQHV_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B 52.268347100219714 0.0353964759249114 5 [{I|L}T]DVQ{I|L}QHV 9 0 + 77.15 0.0 0.0 7.3367 7.3367 93.127 0.0 0.0 0.0 51.49842440838548 10.20181229336984 10.20181229336984 9.208187539523747 0 0.8807196863200843 2.0 0.0 1.2302046884880935 + + [{I|L}T]DVQ{I|L}QHV;[{I|L}T]DV[AG]{I|L}QHV;[{I|L}T]DVQ{I|L}HQV;[{I|L}T]DVQ{I|L}[AG]HV;[{I|L}T]DVQ{I|L}HN{I|L};[{I|L}T]DV[AG]{I|L}HQV;[DV]Q{I|L}APVDPV;[{I|L}T]DV[AG]{I|L}HN{I|L};[{I|L}T]DVQ{I|L}H[AG]V;[{I|L}T]DVQ{I|L}HGG{I|L} 7.3367;6.461;6.3464;6.1706;6.1494;5.4707;5.2883;5.2737;5.1802;4.9833 +;-;-;-;-;-;-;-;-;- + 296 + 1 2.281 51186.6 1.0 3019 4245 7265 SUDHL4_400M_050219_1,7266 SUDHL4_400M_050219_1,7266,TLDVQIQHV True True TLDVQIQHV 38.498275 526.790820300579 1107693.875 7265.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 7.688258330027263 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7267 38.51 652.0 163940.0 25 0 15718.0 + -1 VMKKGGVVP 9 165 465.777621861154 929.540690789108 2 465.7776977419853 MULTI CID FTMS 0 0 0 7265 105532.8359375 0.7478178363499332 -2 0.0700531005859375 2 Oxidation (M) _VM(Oxidation (M))KKGGVVP_ REV__ENSG00000131196|ENST00000427363|NFATC1;REV__ENST00000591089.1_1_18:77211089-77211992:+|nuORF;REV__nc|ENSG00000131196|O95644-10|NFATC1;REV__nc|ENSG00000131196|O95644-11|NFATC1;REV__nc|ENSG00000131196|O95644-17|NFATC1;REV__nc|ENSG00000131196|O95644-2|NFATC1;REV__nc|ENSG00000131196|O95644-3|NFATC1;REV__nc|ENSG00000131196|O95644-4|NFATC1;REV__nc|ENSG00000131196|O95644-5|NFATC1;REV__nc|ENSG00000131196|O95644-6|NFATC1;REV__nc|ENSG00000131196|O95644-8|NFATC1 4.75600775471527 0.7486543447549536 5 KAW 3 -1 26.337 0.0 0.0 2.8333 0.0 0.0 0.0 541.3109224908811 541.3109224908811 15.499225466039697 0.0 0.0 0.0 0 0.1643943297944484 0.0 0.0 0.0 KAW 2.8333 - 69 + 1 2.281 85630.7 1.0 3020 4245 7265 SUDHL4_400M_050219_1,7267 SUDHL4_400M_050219_1,7267,VMKKGGVVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7268 38.516 343.0 143630.0 25 0 7786.4 + 15750 ISAEDAPF 8 102 425.20220754280473 0 425.2019531130791 PEAK CID FTMS 0 0 0 7265 86847.6328125 1.0 0 0.0 3 Unmodified _ISAEDAPF_ REV__ENSG00000180423|ENST00000326737|HARBI1 6.354104778181461 0.5763711549229614 5 {M(Oxidation (M))|F} 1 -1 1.5938 0.0 0.0 0.18786 0.0 0.0 582.2804699178376 116.05072961978748 698.3311995376251 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.18786 + + 2 + 1 2.281 44681.6 1.0 3021 4245 7265 SUDHL4_400M_050219_1,7268 SUDHL4_400M_050219_1,7268,ISAEDAPF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7269 38.53 800.0 206810.0 25 0 10931.0 + 30551 RENDIKSYF 9 168 586.2902978342411 1170.566042735282 2 586.2908813357353 MULTI CID FTMS 0 0 0 7265 82764.453125 0.4331294507911123 -1 0.0190277099609375 4 Unmodified _RENDIKSYF_ ENSG00000168496|ENST00000305885|FEN1;ENST00000401028.2_1_1:91793937-91794252:+|nuORF 40.23920728925047 0.0741434193262949 5 [EP][C(Carbamidomethyl (C))K]{I|L}KSY{M(Oxidation (M))|F} 9 3 + 52.778 0.0 0.0 4.5088 4.5088 79.681 0.0 0.0 0.0 1.1162616120780058 32.14317123927641 1.1162616120780058 3.0406819984605704 0 1.0994850021680094 1.2218487496163564 0.5 0.6694451763165201 [EP][C(Carbamidomethyl (C))K]{I|L}KSY{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HT]{M(Oxidation (M))|F}KSY{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}[YT]{I|L}KSY{M(Oxidation (M))|F};[HM][{M(Oxidation (M))|F}V]{I|L}KSY{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[NG]D{I|L}KSY{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}[Y{M(Oxidation (M))|F}]{I|L}KSY{M(Oxidation (M))|F};[TP][RN]V{[MG]|[TS]}SY{M(Oxidation (M))|F};[TP][RN]{[WT]|[RM]}SY{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}[Y{I|L}]{M(Oxidation (M))|F}KSY{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[DP]Y{M(Oxidation (M))|F} 4.5088;4.249;4.0907;3.8335;3.6726;3.3962;2.9371;2.7867;2.5935;2.4392 -;-;-;-;-;-;-;-;-;- 829 1 2.281 124864.6 0.5600000023841858 3022 4245 7265 SUDHL4_400M_050219_1,7269 SUDHL4_400M_050219_1,7269,RENDIKSYF True True RENDIKSYF 38.529656 586.290881335735 729188.9375 7265.0 ENSG00000168496|ENST00000305885|FEN1;;ENST00000401028.2_1_1:91793937-91794252:+|nuORF 4.155590216318767 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7270 38.532 119.0 310260.0 25 0 31098.0 1978 ANHAPALPC 9 80 447.216747489932 0 447.2169372439384 PEAK CID FTMS 0 0 0 7265 324555.09375 1.0 0 0.0 5 Unmodified _ANHAPALPC_ ENSG00000182463|ENST00000371497|TSHZ2;nc|ENSG00000182463|Q9NRE2-2|TSHZ2 4.75600775471527 0.3444685223463735 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.281 34363.9 1.0 3023 4245 7265 SUDHL4_400M_050219_1,7270 SUDHL4_400M_050219_1,7270,ANHAPALPC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7271 38.537 282.0 170020.0 25 0 23702.0 11352 GFQAGKHY 8 84 454.22581779283104 0 454.2251769900322 PEAK CID FTMS 0 0 0 7265 165039.703125 1.0 0 0.0 6 Unmodified _GFQAGKHY_ ENSG00000168903|ENST00000342868|BTNL3;nc|ENSG00000168903|Q6UXE8-2|BTNL3 6.354104778181461 0.5763711549229614 5 S 1 8 6.2371 0.0 0.0 0.68809 0.0 0.0 684.33664732707 132.04567896060783 816.3823262876778 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 S 0.68809 - 7 + 1 2.281 42844.1 1.0 3024 4245 7265 SUDHL4_400M_050219_1,7271 SUDHL4_400M_050219_1,7271,GFQAGKHY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7273 38.542 41.0 1102000.0 25 0 85223.0 + 22861 LSALRVEEV 9 65 508.29303039678337 1014.5715078603668 2 508.2932922244072 MULTI CID FTMS 0 0 0 7272 999833.625 0.3455130686147631 3 -0.2247505187988281 1 Unmodified _LSALRVEEV_ ENSG00000012048|ENST00000357654|BRCA1;ENST00000493795.5_1_17:41276035-41277334:-|nuORF;nc|ENSG00000012048|P38398-2|BRCA1;nc|ENSG00000012048|P38398-3|BRCA1;nc|ENSG00000012048|P38398-5|BRCA1;nc|ENSG00000012048|P38398-6|BRCA1;nc|ENSG00000012048|P38398-7|BRCA1 32.78568957990786 0.1150597335874693 5 {NN|[MP]|[D{I|L}]|[EV]}[KA]V{I|L}EE 8 5 48.012 0.0 0.0 4.7322 0.0 0.0 0.0 114.05831427572336 114.05831427572336 32.52726745349533 0.0 0.0 0.0 0 0.7134679910804405 1.2218487496163564 0.3252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}[KA]V{I|L}EE 4.7322 - 78 1 2.281 40487.9 1.0 3025 4246 7272 SUDHL4_400M_050219_1,7273 SUDHL4_400M_050219_1,7273,LSALRVEEV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7274 38.556 800.0 156460.0 25 0 8786.0 + 18237 KVIDEIYRV 9 143 567.8304478718817 1133.6463428105633 2 567.8325073122978 MULTI CID FTMS 0 0 0 7272 50380.76171875 0.1467114080737011 5 -0.3563995361328125 2 Unmodified _KVIDEIYRV_ ENSG00000143756|ENST00000366862|FBXO28 23.78978130925829 0.2284941198415988 5 KV{I|L}DE{I|L}RVY 9 2 + 56.171 0.0 0.0 4.9549 4.9549 83.707 0.0 0.0 0.0 31.990000544188177 7.100775082214668 7.100775082214668 6.064921830680703 0 1.3684151806525389 0.4685210829577448 0.0 0.0 KV{I|L}DE{I|L}RVY;KVVEE{I|L}RVY;KV{I|L}DE{I|L}RYV;KV{I|L}{I|L}{I|L}[WE]AY;KVVEE{I|L}RYV;KV{I|L}{I|L}{I|L}[WE]S{M(Oxidation (M))|F} 4.9549;4.4199;3.7796;3.6234;3.2446;2.599 -;-;-;-;-;- 265 + 1 2.281 97373.1 0.5899999737739563 3026 4246 7272 SUDHL4_400M_050219_1,7274 SUDHL4_400M_050219_1,7274,KVIDEIYRV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7276 38.561 66.0 873340.0 25 0 136190.0 41682 VPRPASRS 8 96 435.2508431776387 868.4871334220775 2 435.2507812380791 MULTI CID FTMS 0 0 0 7275 771713.5625 0.8296848903135426 -3 0.0829734802246093 1 Unmodified _VPRPASRS_ ENSG00000101096|ENST00000371564|NFATC2;nc|ENSG00000101096|Q13469-3|NFATC2;nc|ENSG00000101096|Q13469-4|NFATC2;nc|ENSG00000101096|Q13469-5|NFATC2;nc|ENSG00000101096|Q13469|NFATC2 2.302733041254933 0.8103549651115762 5 {I|L} 1 8 9.2694 0.0 0.0 1.0673 0.0 0.0 737.392221778326 0.0 737.392221778326 0.0 3.829087576549595 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0673 - 12 + 1 2.281 49945.9 1.0 3027 4247 7275 SUDHL4_400M_050219_1,7276 SUDHL4_400M_050219_1,7276,VPRPASRS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7277 38.564 173.0 603670.0 25 0 114400.0 + 45251 YSDDIPHAL 9 108 515.7455539756543 1029.4765550181085 2 515.7460204958916 MULTI CID FTMS 0 0 0 7275 323921.625 0.1313843954840288 -2 0.0639457702636718 2 Unmodified _YSDDIPHAL_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 50.855029805455786 0.0384952370514206 5 YSDD{I|L}PHA{I|L} 9 0 + 77.248 0.0 0.0 7.5036 7.5036 94.351 0.0 0.0 0.0 46.31812398270706 6.453428627607806 6.453428627607806 9.318048224298067 0 0.6861818737241735 2.0 0.4247425010840047 0.0 + + YSDD{I|L}PHA{I|L};YSDD{I|L}[RV]Y;YSDD{I|L}[YR]V;YSDD[YR]V{I|L};YSDD{I|L}[H{I|L}][PA];YSD[{M(Oxidation (M))|F}V]{I|L}{[WT]|[RM]};YSV{M(Oxidation (M))|F}D{I|L}{[WT]|[RM]};YSDD[YR]{I|L}V;YSD[{M(Oxidation (M))|F}V]{[WT]|[RM]}{I|L};YSD[W{M(Oxidation (M))|F}]TV{I|L} 7.5036;6.5985;6.0779;5.3726;5.3229;5.2871;5.0819;4.9355;4.8604;4.6621 +;-;-;-;-;-;-;-;-;- + 656 + 1 2.281 86028.2 1.0 3028 4247 7275 SUDHL4_400M_050219_1,7277 SUDHL4_400M_050219_1,7277,YSDDIPHAL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7278 38.568 218.0 344130.0 25 0 54647.0 -1 PMAKAKPK 8 112 443.7640594178652 885.5135659025304 2 443.7648193240166 MULTI CID FTMS 0 0 0 7275 388816.625 1.0 0 0.0 3 Oxidation (M) _PM(Oxidation (M))AKAKPK_ ENSG00000187486|ENST00000339994|KCNJ11;nc|ENSG00000187486|Q14654-2|KCNJ11 2.577480529830294 0.808687252328423 5 {M(Oxidation (M))|F} 1 -1 10.485 0.0 0.0 1.184 0.0 0.0 720.4346912460836 0.0 720.4346912460836 0.0 1.1522446068913703 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.184 + + 17 + 1 2.281 63969.2 1.0 3029 4247 7275 SUDHL4_400M_050219_1,7278 SUDHL4_400M_050219_1,7278,PMAKAKPK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7279 38.575 399.0 267750.0 25 0 37996.0 37344 TIYYGEQRST 10 109 609.2943499927275 1216.5741470522548 2 609.2957641482353 MULTI CID FTMS 0 0 0 7275 212638.890625 0.5916201403414931 -1 0.01861572265625 4 Unmodified _TIYYGEQRST_ ENSG00000127083|ENST00000375550|OMD 13.042465956692816 0.6287021003332052 5 [{I|L}T][DC]{M(Oxidation (M))|F}R{M(Oxidation (M))|F}KST 10 6 + 55.781 0.0 0.0 4.5851 4.5851 81.213 0.0 0.0 0.0 39.46958600230285 18.820010579541027 18.820010579541027 4.216039268698303 0 0.4247425010840047 2.0 0.8609243748081781 0.3494850021680094 [{I|L}T][DC]{M(Oxidation (M))|F}R{M(Oxidation (M))|F}KST;[{I|L}T][DC]{M(Oxidation (M))|F}GV{M(Oxidation (M))|F}KST;[R{M(Oxidation (M))|F}][MD]SV{M(Oxidation (M))|F}KST;[{I|L}T]A[WH][QP]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]{[ES]|[DT]|[{I|L}C]}KS{[MG]|[TS]}A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]{[ES]|[DT]|[{I|L}C]}K{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]A[HQ][WP]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]AHHHHA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]AHH[HA]H{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};[{I|L}T]{[ES]|[DT]|[{I|L}C]}KS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 4.5851;4.2385;3.3054;2.8064;2.6789;2.582;2.4793;2.4142;2.2323;2.1384 -;-;-;-;-;-;-;-;-;- 826 + 1 2.281 81453.7 1.0 3030 4247 7275 SUDHL4_400M_050219_1,7279 SUDHL4_400M_050219_1,7279,TIYYGEQRST False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7280 38.582 345.0 231550.0 25 0 23836.0 -1 0 81 603.9679561883057 1808.882039165117 3 603.9684326052666 MULTI CID FTMS 0 0 0 7275 183153.625 0.0713875134932982 -17 0.924468994140625 5 5 H{I|L}N{[CA]|SS}E[Y{M(Oxidation (M))|F}]T{M(Oxidation (M))|F}{I|L}Q 12 -1 49.408 0.0 0.0 2.7314 0.0 0.0 324.1801014630875 0.0 324.1801014630875 0.0 28.69456889533673 0.0 0.0 0 1.305462187404089 0.0 0.8807196863200843 0.0 H{I|L}N{[CA]|SS}E[Y{M(Oxidation (M))|F}]T{M(Oxidation (M))|F}{I|L}Q 2.7314 - 222 1 2.281 67533.2 1.0 3031 4247 7275 SUDHL4_400M_050219_1,7280 SUDHL4_400M_050219_1,7280, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7281 38.59 472.0 176620.0 25 0 20259.0 + 16974 KITEYLERV 9 104 575.8276391502598 0 575.8276244997978 PEAK CID FTMS 0 0 0 7275 144582.625 1.0 0 0.0 6 Unmodified _KITEYLERV_ ENSG00000131375|ENST00000253693|CAPN7 20.871137199558856 0.1931743680438378 5 {I|L}TEY{I|L}E 6 3 38.889 0.0 0.0 3.3827 0.0 0.0 128.0981171874103 270.1570223443969 398.2551395318072 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {I|L}TEY{I|L}E 3.3827 + + 70 + 1 2.281 69899.2 1.0 3032 4247 7275 SUDHL4_400M_050219_1,7281 SUDHL4_400M_050219_1,7281,KITEYLERV False True KITEYLERV 38.589973 575.827624499798 560158.3125 7275.0 ENSG00000131375|ENST00000253693|CAPN7 6.339693387349446 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7282 38.604 800.0 173520.0 25 0 9477.2 + 29854 QQQIIRETF 9 144 581.8135316715477 1161.612510409895 2 581.8140136599541 MULTI CID FTMS 0 0 0 7275 141073.96875 0.8635453843339702 1 -0.0986251831054687 7 Unmodified _QQQIIRETF_ ENSG00000177879|ENST00000316788|AP3S1;ENST00000515066.6_1_5:115177734-115230799:+|nuORF 78.7280429016045 0.0178249292250809 5 [HT]E{I|L}A{I|L}{I|L}Q[HT] 10 7 + 81.833 0.0 0.0 7.0448 7.0448 94.456 0.0 0.0 0.0 17.98332479720628 51.449487809054425 17.98332479720628 13.411964496339294 0 0.3494850021680094 1.2218487496163564 1.646591250700361 0.4247425010840047 [HT]E{I|L}A{I|L}{I|L}Q[HT];[HT]E{I|L}A{I|L}{I|L}[AG][HT];[HT]E{I|L}A{I|L}{I|L}[HT]Q;[HT]Q[KG]{I|L}{I|L}Q[HT];[AG]S[HK]A{I|L}{I|L}Q[HT];[HT]Q[KG]{I|L}{I|L}[AG][HT];[HT]Q{I|L}[KG]{I|L}Q[HT];[HT][AG][KG]{I|L}{I|L}Q[HT];[AG][HT][KG]{I|L}{I|L}Q[HT];[HT]E{I|L}A{I|L}[DV][HK] 7.0448;5.8902;5.6398;5.279;4.786;4.49;4.3461;4.265;4.0557;4.0256 -;-;-;-;-;-;-;-;-;- 1210 1 2.281 106937.8 0.6700000166893005 3033 4247 7275 SUDHL4_400M_050219_1,7282 SUDHL4_400M_050219_1,7282,QQQIIRETF True True QQQIIRETF 38.603804 581.814013659954 838622.0625 7275.0 ENST00000515066.6_1_5:115177734-115230799:+|nuORF;;ENSG00000177879|ENST00000316788|AP3S1 4.692547003428142 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7283 38.615 616.0 299300.0 25 0 50492.0 + 9322 FIHQHFVEV 9 119 385.8690448894788 1154.5853052686364 3 385.8693725466728 MULTI CID FTMS 0 0 0 7275 130108.953125 0.9046333849150944 1 -0.0986251831054687 8 Unmodified _FIHQHFVEV_ ENSG00000114648|ENST00000232766|KLHL18;ENST00000461084.5_1_3:47324437-47378284:+|nuORF;nc|ENSG00000114648|O94889-2|KLHL18 7.608950283845883 0.6490595679007971 5 {I|L}{M(Oxidation (M))|F}V{NN|[MP]|[D{I|L}]|[EV]} 5 4 20.713 0.0 0.0 1.794 0.0 0.0 549.2445545880875 0.0 549.2445545880875 0.0 4.515449934959719 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}V{NN|[MP]|[D{I|L}]|[EV]} 1.794 - 45 1 2.281 150539.4 1.0 3034 4247 7275 SUDHL4_400M_050219_1,7283 SUDHL4_400M_050219_1,7283,FIHQHFVEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7284 38.628 800.0 76416.0 25 0 18581.0 -1 0 40 1164.1346296117194 3489.3820594353583 3 1164.805712878704 MULTI CID FTMS 0 0 0 7275 91372.046875 0.6280435670977446 -1 0.01861572265625 9 5 N 1 -1 10.797 0.0 0.0 0.30942 0.0 0.0 2439.880937322934 932.4451805211656 3372.3261178441 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 N 0.30942 - 6 + 1 2.281 59322.7 0.4699999988079071 3035 4247 7275 SUDHL4_400M_050219_1,7284 SUDHL4_400M_050219_1,7284, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7285 38.634 323.0 128470.0 25 0 35995.0 -1 0 63 619.3177695300769 618.3104930634769 1 619.3171874880791 MULTI CID FTMS 0 0 0 7275 170119.234375 0.8461605059539838 1 -0.0986251831054687 10 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5 -1 + 27.447 0.0 0.0 4.4391 4.4391 88.675 0.0 0.0 0.0 20.0 26.96272488392665 20.0 27.44727494896693 0 0.0 1.6989700043360187 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.4391 - 14 1 2.281 39660.6 1.0 3036 4247 7275 SUDHL4_400M_050219_1,7285 SUDHL4_400M_050219_1,7285, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7286 38.641 268.0 304890.0 25 0 20331.0 -1 0 118 486.3154652830804 485.3081888164804 1 486.3182556033134 MULTI CID FTMS 0 0 0 7275 127696.9609375 0.4617116470732463 3 -0.2814407348632812 11 5 {I|L} 1 -1 14.626 0.0 0.0 3.0138 0.0 0.0 354.2131398436273 0.0 354.2131398436273 0.0 3.516784832448856 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 3.0138 - 54 + 1 2.281 67359.9 1.0 3037 4247 7275 SUDHL4_400M_050219_1,7286 SUDHL4_400M_050219_1,7286, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7287 38.655 800.0 104160.0 25 0 9923.7 + 17323 KLVDPERDMSL 11 105 651.8400484945977 1301.6655440559953 2 651.8401977419853 MULTI CID FTMS 0 0 0 7275 83667.75 0.9005780129057258 1 -0.0986251831054687 12 Unmodified _KLVDPERDMSL_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 23.80106514851385 0.5333463718001408 5 K{I|L}VD 4 7 45.675 0.0 0.0 3.509 0.0 0.0 0.0 843.3678417629875 843.3678417629875 31.695925227640984 0.0 0.0 0.0 0 1.674742501084005 0.0 0.0 0.0 + K{I|L}VD 3.509 + + 294 + 1 2.281 74072.1 0.4699999988079071 3038 4247 7275 SUDHL4_400M_050219_1,7287 SUDHL4_400M_050219_1,7287,KLVDPERDMSL False True KLVDPERDMSL 38.654541 651.840197741985 517645.46875 7275.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 2.804056406021118 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7289 38.659 17.0 2858400.0 25 0 305760.0 + 1776 ALSDHHIYL 9 79 534.7772920128829 1067.5400310925656 2 534.7778808474541 MULTI CID FTMS 0 0 0 7288 2627712.5 0.396212902996228 2 -0.1828155517578125 1 Unmodified _ALSDHHIYL_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 30.22481116460888 0.1466181017706357 5 [H{I|L}]HDSA{I|L}Y{I|L} 9 4 + 43.622 0.0 0.0 4.0862 4.0862 86.237 0.0 0.0 0.0 13.389399919613965 19.57622060781525 13.389399919613965 13.979400086720368 0 0.6331596456423735 1.2218487496163564 0.0 0.0 [H{I|L}]HDSA{I|L}Y{I|L};HH{I|L}DSA{I|L}Y{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[YQ][HT]{I|L};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[YR][WH]{I|L} 4.0862;2.7767;0.88808;0.45261 -;-;-;- 145 1 2.286 45299.3 1.0 3039 4248 7288 SUDHL4_400M_050219_1,7289 SUDHL4_400M_050219_1,7289,ALSDHHIYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7290 38.661 58.0 760560.0 25 0 58030.0 + 31140 RLNKVISEL 9 75 536.3292369349047 1070.6439209366092 2 536.3295776247978 MULTI CID FTMS 0 0 0 7288 712603.25 0.2505976988090334 3 -0.2391586303710937 2 Unmodified _RLNKVISEL_ ENSG00000177600|ENST00000321153|RPLP2;ENST00000524867.1_1_11:810234-811767:+|nuORF 25.399314129420983 0.2080152500878129 5 V{I|L}SE{I|L} 5 4 24.442 0.0 0.0 2.2829 0.0 0.0 511.323045799025 0.0 511.323045799025 0.0 7.447026752325154 0.0 0.0 0 0.5629529932484498 0.0 0.5 0.0 + V{I|L}SE{I|L} 2.2829 + + 82 1 2.286 41306.7 1.0 3040 4248 7288 SUDHL4_400M_050219_1,7290 SUDHL4_400M_050219_1,7290,RLNKVISEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7291 38.662 40.0 1366800.0 25 0 223900.0 + 27482 PKGPGPLA 8 88 368.7199925701642 735.4254322071284 2 368.7199584841728 MULTI CID FTMS 0 0 0 7288 1495482.25 1.0 0 0.0 3 Unmodified _PKGPGPLA_ REV__ENST00000519574.1_1_2:219125758-219128073:+|nuORF;REV__ENST00000566665.1_1_16:10273773-10274277:-|nuORF 0.6903765706972694 0.8201419426409876 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.286 48815.5 1.0 3041 4248 7288 SUDHL4_400M_050219_1,7291 SUDHL4_400M_050219_1,7291,PKGPGPLA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7292 38.663 61.0 955950.0 25 0 172880.0 + 1779 ALSDHHIYL 9 83 356.85413552731245 1067.5405771821374 3 356.8539916872978 MULTI CID FTMS 0 0 0 7288 746727.625 0.3598565951991981 2 -0.1828155517578125 4 Unmodified _ALSDHHIYL_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 30.22481116460888 0.1466181017706357 5 W{I|L}A{I|L}Y{I|L} 6 5 28.065 0.0 0.0 2.6289 0.0 0.0 290.1040211408219 0.0 290.1040211408219 0.0 14.085390679490075 0.0 0.0 0 0.7429928190999391 0.0 0.0 0.0 W{I|L}A{I|L}Y{I|L} 2.6289 - 97 1 2.286 51907.9 1.0 3042 4248 7288 SUDHL4_400M_050219_1,7292 SUDHL4_400M_050219_1,7292,ALSDHHIYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7293 38.665 56.0 727580.0 25 0 65286.0 + 13352 HLFETISQA 9 64 523.2696439136151 1044.5247348940302 2 523.2698852419853 MULTI CID FTMS 0 0 0 7288 579310.0625 0.3822262046382308 2 -0.1828155517578125 5 Unmodified _HLFETISQA_ ENSG00000277791|ENST00000619426|PSMB3 60.38955033654506 0.025866396858536 5 [H{I|L}]{M(Oxidation (M))|F}ET{I|L}S[QA] 9 0 + 56.291 0.0 0.0 5.3891 5.3891 92.3 0.0 0.0 0.0 16.73371586361025 32.43458697034937 16.73371586361025 56.29094200039429 0 0.2614393726401688 0.958607314841775 1.424742501084005 0.0 + + [H{I|L}]{M(Oxidation (M))|F}ET{I|L}S[QA] 5.3891 + + 111 1 2.286 40619.4 1.0 3043 4248 7288 SUDHL4_400M_050219_1,7293 SUDHL4_400M_050219_1,7293,HLFETISQA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7294 38.668 135.0 702550.0 25 0 90248.0 + 33911 SLFVSNHAY 9 112 519.2551738497947 1036.4957947663893 2 519.2561523318291 MULTI CID FTMS 0 0 0 7288 392514.0625 0.481340632791566 -2 0.1172409057617187 6 Unmodified _SLFVSNHAY_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 36.12702656103203 0.0967173616627612 5 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[NS][HA]Y 9 0 + 43.758 0.0 0.0 4.2218 4.2218 87.399 0.0 0.0 0.0 29.7738464576134 0.2583965226536833 0.2583965226536833 21.30133944514561 0 0.7302046884880937 2.0 0.0 0.7302046884880937 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V[NS][HA]Y;{[TV]|[{I|L}S]}[WK]QQT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[YR]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[EP] 4.2218;2.1666;1.629 +;-;- + 137 + 1 2.286 77411.0 1.0 3044 4248 7288 SUDHL4_400M_050219_1,7294 SUDHL4_400M_050219_1,7294,SLFVSNHAY True True SLFVSNHAY 38.667633 519.256152331829 5046189.0 7288.0 nc|ENSG00000149925|P04075|ALDOA;;ENSG00000149925|ENST00000642816|ALDOA 5.660138448079427 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7295 38.67 99.0 540800.0 25 0 60473.0 + 38799 TVEPSLPI 8 88 428.242954561548 854.471356189896 2 428.2429077029228 MULTI CID FTMS 0 0 0 7288 326383.09375 0.8860084713339594 -2 0.1172409057617187 7 Unmodified _TVEPSLPI_ REV__ENSG00000154175|ENST00000471714|ABI3BP;REV__ENST00000470336.5_1_3:100469341-100565327:-|nuORF;REV__nc|ENSG00000154175|Q7Z7G0|ABI3BP 9.347437153973935 0.7675937258251505 5 {[TV]|[{I|L}S]}N{I|L} 4 -1 21.198 0.0 0.0 2.4808 0.0 0.0 0.0 424.2032860262996 424.2032860262996 14.208187539523747 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.5 0.0 {[TV]|[{I|L}S]}N{I|L} 2.4808 - 57 1 2.286 48868.4 1.0 3045 4248 7288 SUDHL4_400M_050219_1,7295 SUDHL4_400M_050219_1,7295,TVEPSLPI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7296 38.673 184.0 468050.0 25 0 38130.0 + 9474 FLDEPTNHL 9 116 543.2672221997284 1084.5198914662567 2 543.2664672732353 MULTI CID FTMS 0 0 0 7288 220836.65625 0.1587771559898275 5 -0.2796478271484375 8 Unmodified _FLDEPTNHL_ ENSG00000033050|ENST00000287844|ABCF2;ENST00000465687.1_1_3:88367908-88368169:+|nuORF;nc|ENSG00000285292|Q9UG63-2|ABCF2 39.957323273325 0.0756908302845263 5 {[QG]|[NA]}YT{I|L}{M(Oxidation (M))|F}D{[QN]|[E{I|L}]|[KN]} 9 8 {[QG]|[NA]}YT{I|L}{M(Oxidation (M))|F} + + 10.686 -4.1878 -0.59039 0.98535 0.98535 52.561 0.0 0.0 0.0 0.0 -6.910976904085812 -6.910976904085812 0.0 0 0.5 0.0 0.0 0.0 {[QG]|[NA]}YT{I|L}{M(Oxidation (M))|F}D{[QN]|[E{I|L}]|[KN]} 0.98535 - 174 + 1 2.286 70984.7 1.0 3046 4248 7288 SUDHL4_400M_050219_1,7296 SUDHL4_400M_050219_1,7296,FLDEPTNHL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7297 38.68 380.0 300670.0 25 0 19725.0 + 31983 RVFPEKGYSF 10 108 615.3193683525769 1228.6241837719538 2 615.3196899294853 MULTI CID FTMS 0 0 0 7288 214197.984375 0.8300833821178225 1 -0.1075096130371093 9 Unmodified _RVFPEKGYSF_ ENSG00000151923|ENST00000436547|TIAL1;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000151923|Q01085-2|TIAL1 59.05245873256422 0.0390717477387156 5 [RV]{M(Oxidation (M))|F}PEKGYS{M(Oxidation (M))|F} 10 0 + 78.968 0.0 0.0 6.4274 6.4274 84.504 0.0 0.0 0.0 14.448536811704557 52.05697794014226 14.448536811704557 2.5134875797167666 0 1.5114393726401687 0.8538719643217619 0.805462187404089 0.2134679910804404 + + [RV]{M(Oxidation (M))|F}PEKGYS{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PEKGSY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PEKSGY{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]RPEKGYS{M(Oxidation (M))|F};[{M(Oxidation (M))|F}V]RPEKGSY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PT[VG]GYS{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PT[VG]GSY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PEKS[HT]E;[{M(Oxidation (M))|F}V]RPEKSGY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PT[VG]SGY{M(Oxidation (M))|F} 6.4274;6.2228;5.6285;5.2209;5.0163;4.7429;4.5384;4.5089;4.422;3.944 +;-;-;-;-;-;-;-;-;- + 806 1 2.286 89984.6 1.0 3047 4248 7288 SUDHL4_400M_050219_1,7297 SUDHL4_400M_050219_1,7297,RVFPEKGYSF True True RVFPEKGYSF 38.68016 615.319689929485 12267289.5 7288.0 nc|ENSG00000151923|Q01085-2|TIAL1;;ENSG00000151923|ENST00000436547|TIAL1;;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;;ENST00000489822.5_1_10:121336540-121356247:-|nuORF 7.679115295410156 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7298 38.684 190.0 159880.0 25 0 9648.5 29385 QLADAKQCVQF 11 66 625.8136389311055 1249.612724929011 2 625.8138915896416 MULTI CID FTMS 0 0 0 7288 213409.4375 0.1445572765096177 4 -0.2672042846679687 10 Unmodified _QLADAKQCVQF_ ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43-13|PDE4DIP;nc|ENSG00000178104|Q5VU43-2|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;nc|ENSG00000178104|Q5VU43-6|PDE4DIP;nc|ENSG00000178104|Q5VU43-7|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP 16.565877749689598 0.6905575015977202 5 [Q{I|L}]KQQEAMQ{M(Oxidation (M))|F} 10 7 + 56.261 0.0 0.0 4.5023 4.5023 84.803 0.0 0.0 0.0 1.760691023043783 51.19966425517536 1.760691023043783 9.164539485499256 0 0.7302046884880937 0.0 0.0 0.4247425010840047 [Q{I|L}]KQQEAMQ{M(Oxidation (M))|F};[Q{I|L}]K[AG]QEAMQ{M(Oxidation (M))|F};[Q{I|L}]KQ[AG]EAMQ{M(Oxidation (M))|F};[Q{I|L}]KQQEAM[AG]{M(Oxidation (M))|F};[Q{I|L}]K[AG][AG]EAMQ{M(Oxidation (M))|F};[Q{I|L}]K[AG]QEAM[AG]{M(Oxidation (M))|F};[Q{I|L}]KQ[AG]EAM[AG]{M(Oxidation (M))|F};[Q{I|L}]K[NP]{[CA]|SS}AMQ{M(Oxidation (M))|F};[RH]M[R{M(Oxidation (M))|F}][KT]Q{M(Oxidation (M))|F} 4.5023;3.7689;3.7689;3.7689;3.0384;3.0384;3.0384;2.5093;1.9267 -;-;-;-;-;-;-;-;- 187 1 2.286 29717.9 1.0 3048 4248 7288 SUDHL4_400M_050219_1,7298 SUDHL4_400M_050219_1,7298,QLADAKQCVQF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7299 38.687 164.0 417400.0 25 0 31679.0 1592 ALLGRVAVSA 10 107 478.797354315629 955.580155698058 2 478.7982665896416 MULTI CID FTMS 0 0 0 7288 199846.578125 0.7241875794811515 1 -0.1075096130371093 11 Unmodified _ALLGRVAVSA_ ENSG00000141522|ENST00000269321|ARHGDIA;nc|ENSG00000141522|P52565-2|ARHGDIA 18.1463463914782 0.5430639438673815 5 VW 2 9 14.693 0.0 0.0 1.5376 0.0 0.0 652.4383412091812 0.0 652.4383412091812 0.0 -0.3675807724279512 -0.3675807724279512 0.0 0 0.0 0.0 0.0 0.0 VW 1.5376 - 91 1 2.286 59272.9 1.0 3049 4248 7288 SUDHL4_400M_050219_1,7299 SUDHL4_400M_050219_1,7299,ALLGRVAVSA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7300 38.689 111.0 437110.0 25 0 88308.0 + 14788 ILDPSNTEI 9 85 501.2612983066136 1000.5080436800272 2 501.2613708376884 MULTI CID FTMS 0 0 0 7288 173931.203125 1.0 0 0.0 12 Unmodified _ILDPSNTEI_ ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-2|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L 12.531546534597751 0.4974689918368763 5 {I|L}{I|L}DC(Carbamidomethyl (C))R 5 6 33.188 0.0 0.0 3.3171 0.0 0.0 0.0 340.149803283796 340.149803283796 17.703037561203843 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}DC(Carbamidomethyl (C))R 3.3171 - 126 1 2.286 42382.2 1.0 3050 4248 7288 SUDHL4_400M_050219_1,7300 SUDHL4_400M_050219_1,7300,ILDPSNTEI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7301 38.703 800.0 175020.0 25 0 11430.0 -1 VIIMSMSCPI 10 108 583.7841190583144 1165.5536851834288 2 583.7841674685478 MULTI CID FTMS 0 0 0 7288 152348.390625 1.0 0 0.0 13 Carbamidomethyl (C),Oxidation (M) _VIIMSM(Oxidation (M))SC(Carbamidomethyl (C))PI_ ENSG00000132874|ENST00000255226|SLC14A2;nc|ENSG00000132874|Q15849-2|SLC14A2 14.838274106304384 0.5985701837916485 5 [{I|L}V]{M(Oxidation (M))|F}PE 5 -1 42.351 0.0 0.0 3.6336 0.0 0.0 0.0 577.2163790338499 577.2163790338499 22.658715643802765 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.805462187404089 0.0 [{I|L}V]{M(Oxidation (M))|F}PE 3.6336 - 181 + 1 2.286 109708.5 0.699999988079071 3051 4248 7288 SUDHL4_400M_050219_1,7301 SUDHL4_400M_050219_1,7301,VIIMSMSCPI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7302 38.711 448.0 363840.0 25 0 27446.0 + 41919 VQGPVGTDF 9 168 460.22969416991646 918.4448354066328 2 460.2306091189384 MULTI CID FTMS 0 0 0 7288 144723.140625 0.1939611477996904 -2 0.1172409057617187 14 Unmodified _VQGPVGTDF_ ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207 37.97399986684836 0.0865783450051559 5 TD{M(Oxidation (M))|F} 3 6 27.1 0.0 0.0 2.9507 0.0 0.0 537.2882324787017 0.0 537.2882324787017 0.0 10.114691141088713 0.0 0.0 0 0.3054621874040891 0.0 0.3054621874040891 0.0 + TD{M(Oxidation (M))|F} 2.9507 + + 272 + 1 2.286 127647.1 1.0 3052 4248 7288 SUDHL4_400M_050219_1,7302 SUDHL4_400M_050219_1,7302,VQGPVGTDF True True VQGPVGTDF 38.711151 460.230609118938 8371406.5 7288.0 ENSG00000010244|ENST00000394670|ZNF207;;nc|ENSG00000010244|O43670-3|ZNF207;;nc|ENSG00000010244|O43670-2|ZNF207;;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;;nc|ENSG00000010244|O43670|ZNF207 5.153140226999919 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7303 38.718 387.0 291280.0 25 0 46976.0 + 11458 GIFGKGSAY 9 131 450.23472349797606 898.4548940627521 2 450.2348205447197 MULTI CID FTMS 0 0 0 7288 131296.875 0.3560230559565034 -1 0.0986251831054687 15 Unmodified _GIFGKGSAY_ ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF 19.256988751693697 0.3154191944385105 5 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}G 4 5 35.177 0.0 0.0 3.9153 0.0 0.0 0.0 521.2367091505093 521.2367091505093 19.69273760456403 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {[VA]|[{I|L}G]}{M(Oxidation (M))|F}G 3.9153 + + 223 + 1 2.286 91901.0 1.0 3053 4248 7288 SUDHL4_400M_050219_1,7303 SUDHL4_400M_050219_1,7303,GIFGKGSAY False True GIFGKGSAY 38.718082 450.23482054472 2376725.5 7288.0 ENST00000558825.5_1_15:91337395-91358506:+|nuORF;;ENSG00000197299|ENST00000355112|BLM 4.051543235778809 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7304 38.727 499.0 278470.0 25 0 64410.0 + 11924 GMDEKEFTV 9 155 528.2399984968836 1054.465444060567 2 528.2405883669853 MULTI CID FTMS 0 0 0 7288 86585.96875 1.0 0 0.0 16 Unmodified _GMDEKEFTV_ ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8 49.93300154707207 0.0405168250806675 5 {I|L}{I|L}TSWEV 7 7 34.742 0.0 0.0 3.2947 0.0 0.0 0.0 223.00885182859284 223.00885182859284 6.18033672569462 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.0 {I|L}{I|L}TSWEV 3.2947 - 852 1 2.286 114086.9 1.0 3054 4248 7288 SUDHL4_400M_050219_1,7304 SUDHL4_400M_050219_1,7304,GMDEKEFTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7305 38.742 800.0 119810.0 25 0 11307.0 -1 0 118 632.9782656396939 1895.9129675192808 3 633.3129760622978 MULTI CID FTMS 0 0 0 7288 89452.6796875 0.1320813367611437 8 -0.3621788024902344 17 5 [H{I|L}][NP]{I|L}NH{M(Oxidation (M))|F} 8 -1 34.87 0.0 0.0 1.8392 0.0 0.0 0.0 920.4285064199252 920.4285064199252 8.948565749036064 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}][NP]{I|L}NH{M(Oxidation (M))|F} 1.8392 - 564 1 2.286 76255.6 0.5799999833106995 3055 4248 7288 SUDHL4_400M_050219_1,7305 SUDHL4_400M_050219_1,7305, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7306 38.743 43.0 1242100.0 25 0 190460.0 + 12962 HAIPPTLAM 9 76 475.7597802154014 949.5050074976028 2 475.7600585818291 MULTI CID FTMS 0 0 0 7288 615242.625 0.4479113041264119 -3 0.1625709533691406 18 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 32.116972079565 0.1225432171549407 5 [HA]{I|L}P[TP]{I|L}AM 9 0 + 29.287 0.0 0.0 3.0845 3.0845 78.023 0.0 0.0 0.0 1.847105889690969 8.485221620214109 1.847105889690969 4.771212547196626 0 0.8935078169319297 0.0 0.5 0.0 + + [HA]{I|L}P[TP]{I|L}AM;[{I|L}A]HP[TP]{I|L}AM;[YG]{I|L}[TP]P[R{M(Oxidation (M))|F}];[YG]{I|L}[TP][R{I|L}]M;[{M(Oxidation (M))|F}T]{I|L}{I|L}[RV]AM;[{M(Oxidation (M))|F}T]{I|L}{I|L}GP[R{M(Oxidation (M))|F}];[{M(Oxidation (M))|F}T]{I|L}{I|L}G[R{I|L}]M 3.0845;2.582;2.3048;2.3048;2.2807;1.2516;1.2516 +;-;-;-;-;-;- + 169 1 2.286 46317.9 1.0 3056 4248 7288 SUDHL4_400M_050219_1,7306 SUDHL4_400M_050219_1,7306,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7307 38.757 800.0 231630.0 25 0 62871.0 -1 0 65 1178.1628306633663 3531.4666625903 3 1178.497485339642 MULTI CID FTMS 0 0 0 7288 267741.9375 0.6737031766910553 -1 0.0986251831054687 19 5 E 1 -1 6.9897 0.0 0.0 0.19793 0.0 0.0 2875.239060570221 524.1626288368865 3399.401689407108 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19793 - 28 + 1 2.286 154031.8 0.75 3057 4248 7288 SUDHL4_400M_050219_1,7307 SUDHL4_400M_050219_1,7307, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7308 38.762 210.0 290340.0 25 0 25839.0 + -1 YSIVGQKL 8 97 454.2628020166386 0 454.2657043337822 PEAK CID FTMS 0 0 0 7288 213967.78125 1.0 0 0.0 20 Oxidation (M) _VLTM(Oxidation (M))TTII_ ENST00000483205.1_1_3:47551637-47555080:-|nuORF;ENST00000485029.5_1_3:47545746-47555080:-|nuORF;ENSG00000163832|ENST00000296149|ELP6;nc|ENSG00000163832|Q0PNE2-2|ELP6 6.354104778181461 0.5763711549229614 5 S{I|L}V 3 -1 14.693 0.0 0.0 1.6208 0.0 0.0 163.0569017854272 441.247413423927 604.3043152093542 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S{I|L}V 1.6208 - 24 + 1 2.286 51418.9 1.0 3058 4248 7288 SUDHL4_400M_050219_1,7308 SUDHL4_400M_050219_1,7308,VLTMTTII False False YSIVGQKL 38.762124 454.265704333782 1103809.625 7288.0 ENST00000483205.1_1_3:47551637-47555080:-|nuORF;;ENST00000485029.5_1_3:47545746-47555080:-|nuORF;;ENSG00000163832|ENST00000296149|ELP6;;nc|ENSG00000163832|Q0PNE2-2|ELP6 5.931015173594157 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7310 38.767 14.0 3568400.0 25 0 709420.0 -1 0 83 360.2066713747384 359.1993949081384 1 360.2065307497978 MULTI CID FTMS 0 0 0 7309 4378487.5 1.0 0 0.0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.286 45287.4 1.0 3059 4249 7309 SUDHL4_400M_050219_1,7310 SUDHL4_400M_050219_1,7310, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7311 38.769 130.0 347020.0 25 0 22157.0 + -1 RAVAPTMSL 9 94 473.26300013706367 944.5114473409274 2 473.2631408572197 MULTI CID FTMS 0 0 0 7309 169533.109375 0.1720431326589274 3 -0.1596946716308593 2 Carbamidomethyl (C) _LLSPRC(Carbamidomethyl (C))SI_ nc|ENSG00000144560|Q14135-4|VGLL4;nc|ENSG00000144560|Q14135-5|VGLL4;nc|ENSG00000144560|Q14135|VGLL4;nc|ENSG00000144560|Q14135-2|VGLL4;nc|ENSG00000144560|Q14135-6|VGLL4;ENSG00000144560|ENST00000430365|VGLL4 19.438996006549623 0.6237395211498085 5 [{M(Oxidation (M))|F}V]{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}G{I|L} 8 -1 + 32.246 0.0 0.0 3.414 3.414 78.458 0.0 0.0 0.0 6.672561049816451 2.663800089887548 2.663800089887548 4.655593552960941 0 0.6382104921644451 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}G{I|L};[{M(Oxidation (M))|F}V]M{I|L}[HV]S{I|L};{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}{I|L}MD{I|L} 3.414;2.9211;1.9238 -;-;- 61 + 1 2.286 38226.9 1.0 3060 4249 7309 SUDHL4_400M_050219_1,7311 SUDHL4_400M_050219_1,7311,LLSPRCSI False False RAVAPTMSL 38.769484 473.26314085722 10628299.0 7309.0 nc|ENSG00000144560|Q14135-4|VGLL4;;nc|ENSG00000144560|Q14135-5|VGLL4;;nc|ENSG00000144560|Q14135|VGLL4;;nc|ENSG00000144560|Q14135-2|VGLL4;;nc|ENSG00000144560|Q14135-6|VGLL4;;ENSG00000144560|ENST00000430365|VGLL4 4.004323482513428 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7312 38.772 119.0 442450.0 25 0 58573.0 -1 0 98 412.2281995384317 411.22092307183175 1 412.2305480837822 MULTI CID FTMS 0 0 0 7309 361319.1875 0.3512710783050831 10 -0.3425521850585937 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.286 45211.9 1.0 3061 4249 7309 SUDHL4_400M_050219_1,7312 SUDHL4_400M_050219_1,7312, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7313 38.774 117.0 473200.0 25 0 53927.0 -1 MPQLKIPA 8 108 457.2642548034081 912.513956673616 2 457.2628356814384 MULTI CID FTMS 0 0 0 7309 243934.71875 0.6515659296080409 10 -0.3425521850585937 4 Oxidation (M) _M(Oxidation (M))PQLKIPA_ ENST00000440007.5_1_10:119250311-119301635:-|nuORF 5.760428011301431 0.7893668129297577 5 {[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}{I|L}HR 7 -1 {[{M(Oxidation (M))|F}D]|MM} + + 24.949 2.7201 1.0379 2.734 2.734 53.74 0.0 0.0 0.0 0.0 13.108820389549736 0.0 0.0 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}{I|L}HR 2.734 - 44 + 1 2.286 48555.6 1.0 3062 4249 7309 SUDHL4_400M_050219_1,7313 SUDHL4_400M_050219_1,7313,MPQLKIPA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7314 38.779 275.0 407150.0 25 0 27700.0 + 30512 REIAQDFKTDL 11 99 668.3484110627554 1334.6822691923107 2 668.3484374880791 MULTI CID FTMS 0 0 0 7309 235501.09375 1.0 0 0.0 5 Unmodified _REIAQDFKTDL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF 55.83852870615439 0.086034274912822 5 {[RE]|[WV]}{I|L}AQD{M(Oxidation (M))|F}KTD{I|L} 11 0 + 85.523 0.0 0.0 6.4077 6.4077 89.044 0.0 0.0 0.0 4.35728569561438 76.85062113113652 4.35728569561438 7.95880017344075 0 2.0709991640913 0.0 0.7614393726401688 0.4247425010840047 + + {[RE]|[WV]}{I|L}AQD{M(Oxidation (M))|F}KTD{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[HG]|PP}QD{M(Oxidation (M))|F}KTD{I|L};{[RE]|[WV]}{I|L}A[AG]D{M(Oxidation (M))|F}KTD{I|L};[{I|L}A]{[RE]|[WV]}QD{M(Oxidation (M))|F}KTD{I|L};[{M(Oxidation (M))|F}V]TK{M(Oxidation (M))|F}D{[SA]|[TG]}[NP]P{I|L};[TP][Q{I|L}]{[SA]|[TG]}D{M(Oxidation (M))|F}KTD{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[HG]|PP}[AG]D{M(Oxidation (M))|F}KTD{I|L};[{I|L}A]{[RE]|[WV]}[AG]D{M(Oxidation (M))|F}KTD{I|L};[{M(Oxidation (M))|F}V]TK{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[NP]P{I|L};[TP][Q{I|L}]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}KTD{I|L} 6.4077;5.8114;5.7238;5.5859;5.2092;5.1456;5.1275;4.9019;4.452;4.3884 +;-;-;-;-;-;-;-;-;- + 552 1 2.286 85914.5 1.0 3063 4249 7309 SUDHL4_400M_050219_1,7314 SUDHL4_400M_050219_1,7314,REIAQDFKTDL True True REIAQDFKTDL 38.779455 668.3498 1432197.25 7309.0 ENSG00000275379|ENST00000616365|H3C11;;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000163041|ENST00000366815|H3-3A;;ENSG00000197153|ENST00000359303|H3C12;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000168148|ENST00000366696|H3-4;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF 8.14436117808024 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7315 38.784 255.0 368150.0 25 0 35174.0 42117 VRPPGMAL 8 117 420.7434663776574 0 420.7436096072197 PEAK CID FTMS 0 0 0 7309 199247.3125 0.4481437734341202 10 -0.3425521850585937 6 Unmodified _VRPPGMAL_ ENST00000431601.5_1_3:39148536-39148707:-|nuORF 2.889219685676258 0.5898224805723975 5 H 1 8 5.4846 0.0 0.0 0.65333 0.0 0.0 420.2379233144328 279.1453390588936 699.3832623733264 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.65333 - 6 + 1 2.286 74877.4 1.0 3064 4249 7309 SUDHL4_400M_050219_1,7315 SUDHL4_400M_050219_1,7315,VRPPGMAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7316 38.789 258.0 291240.0 25 0 20401.0 + 18161 KTRIIDVVY 9 90 553.8317019051867 1105.6488508771731 2 553.8317138552666 MULTI CID FTMS 0 0 0 7309 187818.40625 0.71044035514754 -1 0.1075096130371093 7 Unmodified _KTRIIDVVY_ ENSG00000142937|ENST00000396651|RPS8 22.736283301280096 0.2418982879461534 5 [{I|L}V][SG]NKKVVY 10 7 + 56.137 0.0 0.0 5.0773 5.0773 82.357 0.0 0.0 0.0 3.979400086720375 15.026975159433531 3.979400086720375 3.979400086720375 0 1.0 1.5228787452803376 0.0 0.805462187404089 [{I|L}V][SG]NKKVVY;[DV][KQ]KKVVY;{[TV]|[{I|L}S]}[NG]VKKVVY;VV{[SA]|[TG]}NKKVVY;[{I|L}V][SG]NKVKVY;[{I|L}V][SG]GGKKVVY;{[TV]|[{I|L}S]}[VG]NKKVVY;[VS]{[QG]|[NA]}VKKVVY;[DV][KQ]KVKVY;[VS]{[VA]|[{I|L}G]}NKKVVY 5.0773;4.7174;4.4914;4.2715;4.2616;4.2484;4.2191;4.1314;3.9017;3.8592 -;-;-;-;-;-;-;-;-;- 431 1 2.286 64606.9 1.0 3065 4249 7309 SUDHL4_400M_050219_1,7316 SUDHL4_400M_050219_1,7316,KTRIIDVVY False True KTRIIDVVY 38.788988 553.831713855267 1542036.125 7309.0 ENSG00000142937|ENST00000396651|RPS8 4.829728364944458 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7317 38.793 195.0 278210.0 25 0 19191.0 + 45199 YQTEIGQTL 9 105 526.7662771813534 1051.5180014295067 2 526.7660400271416 MULTI CID FTMS 0 0 0 7309 167368.703125 0.3842636604198274 -2 0.2061347961425781 8 Unmodified _YQTEIGQTL_ ENSG00000160752|ENST00000368356|FDPS;ENST00000453932.1_1_7:76099481-76100288:-|nuORF;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS 32.30548876998284 0.1201446275138228 5 EC(Carbamidomethyl (C))T{I|L} 4 6 29.686 0.0 0.0 2.8231 0.0 0.0 530.3059785797005 0.0 530.3059785797005 0.0 10.398853159189688 0.0 0.0 0 0.0 0.0 1.0044321917401078 0.0 EC(Carbamidomethyl (C))T{I|L} 2.8231 - 227 + 1 2.286 45860.0 1.0 3066 4249 7309 SUDHL4_400M_050219_1,7317 SUDHL4_400M_050219_1,7317,YQTEIGQTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7318 38.797 245.0 468860.0 25 0 38967.0 42253 VSNIQARAV 9 138 479.277087279864 956.539621626528 2 479.2764160037041 MULTI CID FTMS 0 0 0 7309 142207.515625 0.1981570116241267 -15 0.8939094543457031 9 Unmodified _VSNIQARAV_ ENSG00000075420|ENST00000415807|FNDC3B;ENST00000469491.5_1_3:171830269-172055226:+|nuORF;nc|ENSG00000075420|Q53EP0-2|FNDC3B 4.75600775471527 0.7486543447549536 5 {I|L} 1 8 10.837 0.0 0.0 1.133 0.0 0.0 825.4449693821905 0.0 825.4449693821905 0.0 1.1054803605884889 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.133 + + 40 + 1 2.286 91571.7 1.0 3067 4249 7309 SUDHL4_400M_050219_1,7318 SUDHL4_400M_050219_1,7318,VSNIQARAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7319 38.802 239.0 283110.0 25 0 17242.0 + 2059 APLPPHLPGA 10 101 485.2792959137977 968.5440388943954 2 485.2792846560478 MULTI CID FTMS 0 0 0 7309 111785.859375 0.3896294544671893 58 -3.2311935424804688 10 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 24.67388899826682 0.4143206957119831 5 [PA]{I|L} 3 7 26.427 0.0 0.0 2.7285 0.0 0.0 0.0 684.3467176876172 684.3467176876172 11.8765315847925 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 + [PA]{I|L} 2.7285 + + 227 1 2.286 58687.2 1.0 3068 4249 7309 SUDHL4_400M_050219_1,7319 SUDHL4_400M_050219_1,7319,APLPPHLPGA False True False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 7320 38.816 800.0 207770.0 25 0 18285.0 + 18120 KTLERSYLL 9 154 561.8291494207756 1121.643745908351 2 561.8296386599541 MULTI CID FTMS 0 0 0 7309 126061.4921875 0.5692964496659378 -1 0.1075096130371093 11 Unmodified _KTLERSYLL_ ENSG00000167325|ENST00000300738|RRM1 67.83816525789305 0.0219346420158844 5 T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GSTK{I|L}{I|L} 9 6 56.318 0.0 0.0 5.021 0.0 0.0 128.0953541486344 0.0 128.0953541486344 0.0 16.23786964412558 0.0 0.0 0 2.16944517631652 0.0 0.6747425010840047 0.6861818737241735 T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GSTK{I|L}{I|L} 5.021 - 1661 1 2.286 125746.9 0.6399999856948853 3069 4249 7309 SUDHL4_400M_050219_1,7320 SUDHL4_400M_050219_1,7320,KTLERSYLL True True KTLERSYLL 38.815592 561.829638659954 1311880.875 7309.0 ENSG00000167325|ENST00000300738|RRM1 5.03816572825114 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7321 38.824 450.0 289040.0 25 0 17469.0 40941 VLTNVLVGGNT 11 159 543.8107206383868 1085.6068883435737 2 543.8121215701103 MULTI CID FTMS 0 0 0 7309 111592.3046875 0.7021656713619565 -2 0.2061347961425781 12 Unmodified _VLTNVLVGGNT_ ENSG00000174227|ENST00000453061|PIGG;ENST00000507493.1_1_4:514867-515974:+|nuORF;ENST00000513679.1_1_4:515547-515999:+|nuORF;nc|ENSG00000174227|Q5H8A4-2|PIGG;nc|ENSG00000174227|Q5H8A4-3|PIGG 46.0223103267499 0.1396584557920269 5 V{I|L}{I|L}ER{I|L}{M(Oxidation (M))|F} 7 8 57.74 0.0 0.0 5.3187 0.0 0.0 0.0 212.0677279108032 212.0677279108032 20.77959424601349 0.0 0.0 0.0 0 0.6677353201839438 2.0 0.3054621874040891 0.5796896906561032 V{I|L}{I|L}ER{I|L}{M(Oxidation (M))|F} 5.3187 - 710 + 1 2.286 106624.1 1.0 3070 4249 7309 SUDHL4_400M_050219_1,7321 SUDHL4_400M_050219_1,7321,VLTNVLVGGNT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7322 38.837 800.0 35129.0 25 0 7042.4 -1 0 31 1157.1423742015504 3468.405293204852 3 1157.810351550579 MULTI CID FTMS 0 0 0 7309 103992.8828125 0.7569876585278859 1 -0.0753059387207031 13 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.286 32640.3 0.5099999904632568 3071 4249 7309 SUDHL4_400M_050219_1,7322 SUDHL4_400M_050219_1,7322, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7324 38.842 43.0 1278900.0 25 0 322130.0 + 45252 YSDDIPHAL 9 70 515.7455539756543 1029.4765550181085 2 515.7459594607353 MULTI CID FTMS 0 0 0 7323 1100090.75 0.4462028682596349 1 -0.0563430786132812 1 Unmodified _YSDDIPHAL_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 42.09456458481378 0.0639583784996157 5 YSDD{I|L}P[HA]{I|L} 9 0 + 69.218 0.0 0.0 6.7236 6.7236 94.914 0.0 0.0 0.0 53.02046884880937 3.4678748622465605 3.4678748622465605 23.807196863200843 0 0.7614393726401688 2.0 0.0 0.0 + + YSDD{I|L}P[HA]{I|L};YSD[{M(Oxidation (M))|F}V]{I|L}{[WT]|[RM]};YSD[{M(Oxidation (M))|F}V]{[WT]|[RM]}{I|L} 6.7236;4.4111;3.9032 +;-;- + 122 + 1 2.286 47646.6 1.0 3072 4250 7323 SUDHL4_400M_050219_1,7324 SUDHL4_400M_050219_1,7324,YSDDIPHAL True True YSDDIPHAL 38.84214 515.745959460735 28658764.0 7323.0 ENST00000518442.5_1_8:109247181-109261015:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 9.639564037322998 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7325 38.844 54.0 833950.0 25 0 159540.0 + 20403 LLHALLSC 8 77 435.2508431776387 868.4871334220775 2 435.2511474490166 MULTI CID FTMS 0 0 0 7323 930128.5 1.0 0 0.0 2 Unmodified _LLHALLSC_ REV__ENSG00000170915|ENST00000442253|PAQR8 2.302733041254933 0.8103549651115762 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.286 42146.1 1.0 3073 4250 7323 SUDHL4_400M_050219_1,7325 SUDHL4_400M_050219_1,7325,LLHALLSC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7326 38.853 522.0 301690.0 25 0 27863.0 + 34463 SLYSQVHQI 9 150 537.7822700139064 1073.5499870946128 2 537.7814819216728 MULTI CID FTMS 0 0 0 7323 183833.609375 0.414365396052119 -5 0.3453865051269531 3 Unmodified _SLYSQVHQI_ ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12 41.8396318013385 0.0653578398400075 5 {[TV]|[{I|L}S]}YSQV[HQ]{I|L} 9 0 + 51.379 0.0 0.0 4.7859 4.7859 86.325 0.0 0.0 0.0 28.598637793493094 0.4575749056067479 0.4575749056067479 9.208187539523747 0 0.7742275032520141 2.0 0.3252574989159953 0.9291746928241126 + + {[TV]|[{I|L}S]}YSQV[HQ]{I|L};{[TV]|[{I|L}S]}YS[AG]V[HQ]{I|L};{[TV]|[{I|L}S]}Y{I|L}[NS][HQ]{I|L};{[TV]|[{I|L}S]}Y[HN]{I|L}QTV;{[TV]|[{I|L}S]}Y[HN]Q{I|L}TV;{[TV]|[{I|L}S]}{I|L}Y[NS][HQ]{I|L};{[TV]|[{I|L}S]}{I|L}{[CA]|SS}[EP]DKV;{[TV]|[{I|L}S]}Y[HN]{I|L}E[KA];{[TV]|[{I|L}S]}[HN]QY{I|L}TV;{[TV]|[{I|L}S]}[HN]Y{I|L}QTV 4.7859;3.9282;3.5444;2.8824;2.7671;2.753;2.6916;2.6811;2.6042;2.6031 +;-;-;-;-;-;-;-;-;- + 1368 + 1 2.286 122830.1 1.0 3074 4250 7323 SUDHL4_400M_050219_1,7326 SUDHL4_400M_050219_1,7326,SLYSQVHQI True True SLYSQVHQI 38.852715 537.781481921673 2755732.75 7323.0 ENSG00000184634|ENST00000374080|MED12;;nc|ENSG00000184634|Q93074-2|MED12;;nc|ENSG00000184634|Q93074-3|MED12 6.449489752451579 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7327 38.859 360.0 256000.0 25 0 20588.0 + 31980 RVFPDKGYSF 10 101 608.3112524167333 1214.6079519002665 2 608.3111450076103 MULTI CID FTMS 0 0 0 7323 172923.890625 0.8798486712905553 -3 0.2814407348632812 4 Unmodified _RVFPDKGYSF_ ENSG00000116001|ENST00000433529|TIA1;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1 53.31671820480216 0.0606844387689228 5 [RV]{M(Oxidation (M))|F}[DP]KGYS{M(Oxidation (M))|F} 10 0 + 53.783 0.0 0.0 4.428 4.428 79.118 0.0 0.0 0.0 4.701814601572586 13.521825181113629 4.701814601572586 2.95371572735597 0 1.4634679910804405 0.0 0.805462187404089 0.25 + + [RV]{M(Oxidation (M))|F}[DP]KGYS{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}[DP]KGSY{M(Oxidation (M))|F};[{I|L}T][VG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KGYS{M(Oxidation (M))|F};[{I|L}T][VG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KGSY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}[DP]KSGY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}[QT][PA]YS{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}[QT][PA]SY{M(Oxidation (M))|F};[{I|L}T][VG]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KSGY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}[QT][TP]GY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}[DP]KS[HT]E 4.428;4.1848;4.0409;3.7977;3.3394;3.276;3.0328;2.9523;2.1874;2.1073 +;-;-;-;-;-;-;-;-;- + 429 1 2.286 72813.4 1.0 3075 4250 7323 SUDHL4_400M_050219_1,7327 SUDHL4_400M_050219_1,7327,RVFPDKGYSF True True RVFPDKGYSF 38.859213 608.31114500761 2084057.0 7323.0 ENST00000477415.5_1_2:70443338-70451751:-|nuORF;;nc|ENSG00000116001|P31483-2|TIA1;;ENSG00000116001|ENST00000433529|TIA1;;ENST00000482876.5_1_2:70442329-70444102:-|nuORF 6.785165945688884 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7328 38.873 800.0 199020.0 25 0 18512.0 9712 FLVAGKAL 8 169 409.7593446993049 817.5041364654098 2 409.7587768435478 MULTI CID FTMS 0 0 0 7323 93930.015625 0.6643350831905079 1 -0.0563430786132812 5 Unmodified _FLVAGKAL_ ENST00000416928.6_1_2:177040485-177040746:-|nuORF 2.889219685676258 0.8067950007271085 5 {M(Oxidation (M))|F} 1 7 13.979 0.0 0.0 1.71 0.0 0.0 652.4248040452911 0.0 652.4248040452911 0.0 4.225490200071285 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.71 + + 53 + 1 2.286 121714.6 0.75 3076 4250 7323 SUDHL4_400M_050219_1,7328 SUDHL4_400M_050219_1,7328,FLVAGKAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7329 38.878 261.0 297220.0 25 0 47693.0 + 30143 QVNEAAFY 8 110 471.2203007302433 940.4260485272866 2 471.2203552126884 MULTI CID FTMS 0 0 0 7323 96583.6328125 0.94796511208845 -1 0.0753059387207031 6 Unmodified _QVNEAAFY_ REV__ENSG00000074706|ENST00000367220|IPCEF1;REV__nc|ENSG00000074706|Q8WWN9|IPCEF1;REV__nc|ENSG00000288520|G9CGD6-2|CNK3;REV__nc|ENSG00000288520|G9CGD6-3|CNK3;REV__nc|ENSG00000288520|G9CGD6|CNK3 16.942295170755138 0.6606234159769251 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}N[TA]D{M(Oxidation (M))|F} 8 -1 {[QV]|[N{I|L}]|[RA]|[KV]} + + 17.224 9.4762 4.1722 1.8315 1.8315 52.763 0.0 0.0 0.0 0.0 2.135479511903611 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}N[TA]D{M(Oxidation (M))|F} 1.8315 - 148 + 1 2.286 65500.9 1.0 3077 4250 7323 SUDHL4_400M_050219_1,7329 SUDHL4_400M_050219_1,7329,QVNEAAFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7330 38.892 800.0 156650.0 25 0 21319.0 -1 0 82 904.9561044016752 0 904.953662097454 PEAK CID FTMS 0 0 0 7323 85309.6796875 0.5929641607563779 -5 0.3453865051269531 7 5 {I|L}PN{I|L}N 5 -1 38.443 0.0 0.0 2.1264 0.0 0.0 137.06778469286297 1116.5050753229127 1253.5728600157756 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.4247425010840047 {I|L}PN{I|L}N 2.1264 - 142 + 1 2.286 88372.1 0.5600000023841858 3078 4250 7323 SUDHL4_400M_050219_1,7330 SUDHL4_400M_050219_1,7330, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7331 38.894 94.0 401620.0 25 0 42330.0 -1 PMVRILAP 8 73 456.77195458288855 0 456.7731506228447 PEAK CID FTMS 0 0 0 7323 246147.390625 1.0 0 0.0 8 Oxidation (M) _PM(Oxidation (M))VRILAP_ ENSG00000161649|ENST00000317310|CD300LG;nc|ENSG00000161649|Q6UXG3-2|CD300LG;nc|ENSG00000161649|Q6UXG3-3|CD300LG;nc|ENSG00000161649|Q6UXG3-4|CD300LG;nc|ENSG00000161649|Q6UXG3-5|CD300LG 14.581692164780916 0.4900557725783909 5 {I|L} 1 -1 15.797 0.0 0.0 1.733 0.0 0.0 537.3335382167553 258.0887174803891 795.4222556971445 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {I|L} 1.733 + + 30 + 1 2.286 37778.9 1.0 3079 4250 7323 SUDHL4_400M_050219_1,7331 SUDHL4_400M_050219_1,7331,PMVRILAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7333 38.909 762.0 141290.0 25 0 12721.0 + 38821 TVGIIDIIS 9 170 465.777621861154 929.540690789108 2 465.7775451540947 MULTI CID FTMS 0 0 0 7332 90595.890625 0.641972920632077 4 -0.0902786254882812 1 Unmodified _TVGIIDIIS_ REV__ENST00000434856.1_1_1:120144028-120151554:+|nuORF 10.073929032068715 0.563993802247229 5 {I|L} 1 -1 11.259 0.0 0.0 1.2112 0.0 0.0 798.445657075044 0.0 798.445657075044 0.0 0.1498161168872158 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2112 + + 98 + 1 2.286 85699.6 1.0 3080 4251 7332 SUDHL4_400M_050219_1,7333 SUDHL4_400M_050219_1,7333,TVGIIDIIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7334 38.912 96.0 1002600.0 25 0 110880.0 + 30977 RLAVYIDKV 9 76 538.8263590097329 1075.6381650862656 2 538.8262206912041 MULTI CID FTMS 0 0 0 7332 609988.5 0.294357761084724 -5 0.3563995361328125 2 Unmodified _RLAVYIDKV_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 32.78568957990786 0.1150597335874693 5 Y{I|L}DKV 5 4 45.815 0.0 0.0 4.2594 0.0 0.0 439.2913372632342 0.0 439.2913372632342 0.0 22.800084529637985 0.0 0.0 0 1.086696871556164 0.0 0.0 0.0 + Y{I|L}DKV 4.2594 + + 72 1 2.286 78801.2 1.0 3081 4251 7332 SUDHL4_400M_050219_1,7334 SUDHL4_400M_050219_1,7334,RLAVYIDKV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7335 38.914 94.0 789770.0 25 0 99847.0 + 10551 FVEVGRVAY 9 90 520.281753362943 1038.548953792686 2 520.2813598513603 MULTI CID FTMS 0 0 0 7332 508504.71875 1.0 0 0.0 3 Unmodified _FVEVGRVAY_ ENSG00000188846|ENST00000396203|RPL14 30.63653989081413 0.1413794767160703 5 VEVE 4 6 45.433 0.0 0.0 4.3747 0.0 0.0 564.3020325034962 0.0 564.3020325034962 0.0 29.80063824229816 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 VEVE 4.3747 - 68 1 2.286 63886.5 1.0 3082 4251 7332 SUDHL4_400M_050219_1,7335 SUDHL4_400M_050219_1,7335,FVEVGRVAY False True FVEVGRVAY 38.913589 520.28135985136 2723463.5 7332.0 ENSG00000188846|ENST00000396203|RPL14 4.278912941614787 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7336 38.916 90.0 760090.0 25 0 79499.0 + 20071 LIVEPSREL 9 69 528.3078016900398 1054.6010504468795 2 528.3078491091728 MULTI CID FTMS 0 0 0 7332 449542.15625 0.4910683038444612 -5 0.3563995361328125 4 Unmodified _LIVEPSREL_ ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 25.399314129420983 0.2080152500878129 5 {I|L}{I|L}VE{I|L} 5 4 51.778 0.0 0.0 4.9097 0.0 0.0 0.0 484.2114351861938 484.2114351861938 40.66901560044258 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 {I|L}{I|L}VE{I|L} 4.9097 - 67 + 1 2.286 60240.6 1.0 3083 4251 7332 SUDHL4_400M_050219_1,7336 SUDHL4_400M_050219_1,7336,LIVEPSREL False True LIVEPSREL 38.915583 528.307849109173 11095655.0 7332.0 nc|ENSG00000079785|Q92499-2|DDX1;;nc|ENSG00000079785|Q92499-3|DDX1;;ENSG00000079785|ENST00000233084|DDX1 1.9696680704752605 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7337 38.918 104.0 582990.0 25 0 59293.0 + 40394 VIDQKVYEI 9 86 553.8096585622565 1105.6047641913128 2 553.8077270388603 MULTI CID FTMS 0 0 0 7332 266513.96875 0.5129534096351636 -3 0.2391586303710937 5 Unmodified _VIDQKVYEI_ ENSG00000100129|ENST00000652021|EIF3L;ENST00000406934.5_1_22:38246060-38259001:+|nuORF;ENST00000476955.5_1_22:38245435-38266306:+|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L 24.99096001346401 0.2132109383330889 5 V{I|L}D 3 6 44.781 0.0 0.0 4.0504 0.0 0.0 0.0 775.3990572565061 775.3990572565061 12.653631197717983 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 + V{I|L}D 4.0504 + + 166 + 1 2.286 56306.8 1.0 3084 4251 7332 SUDHL4_400M_050219_1,7337 SUDHL4_400M_050219_1,7337,VIDQKVYEI False True VIDQKVYEI 38.917818 553.80772703886 2843741.5 7332.0 ENST00000476955.5_1_22:38245435-38266306:+|nuORF;;nc|ENSG00000100129|Q9Y262-2|EIF3L;;ENST00000406934.5_1_22:38246060-38259001:+|nuORF;;ENSG00000100129|ENST00000652021|EIF3L 0.9343285659948984 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7338 38.922 211.0 343340.0 25 0 32386.0 + -1 FCLAWCSA 8 101 479.2032326584469 956.3919123836936 2 479.2026550173759 MULTI CID FTMS 0 0 0 7332 263093.9375 1.0 0 0.0 6 Carbamidomethyl (C) _FCLAWC(Carbamidomethyl (C))SA_ REV__ENST00000589217.1_1_17:76103713-76105382:-|nuORF;REV__ENST00000592939.1_1_17:76105130-76105382:-|nuORF 8.593279151180031 0.7721714526254883 5 {I|L} 1 -1 12.218 0.0 0.0 1.2776 0.0 0.0 825.2967871168953 0.0 825.2967871168953 0.0 1.6225554575675185 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2776 + + 26 + 1 2.286 59194.1 1.0 3085 4251 7332 SUDHL4_400M_050219_1,7338 SUDHL4_400M_050219_1,7338,FCLAWCSA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7340 38.929 150.0 554220.0 25 0 63548.0 28091 PPKIPGGA 8 128 368.7199925701642 735.4254322071284 2 368.7192870974541 MULTI CID FTMS 0 0 0 7339 427765.28125 0.2860383540159035 4 -0.0949745178222656 1 Unmodified _PPKIPGGA_ ENSG00000173486|ENST00000309366|FKBP2;ENST00000541388.1_1_11:64010007-64011498:+|nuORF 0.7936320650641473 0.8195151834710337 5 W 1 8 16.99 0.0 0.0 2.3102 0.0 0.0 531.3362578680644 0.0 531.3362578680644 0.0 -0.9691001300805624 -0.9691001300805624 0.0 0 0.0 0.0 0.0 0.0 W 2.3102 - 10 + 1 2.28 71834.3 1.0 3086 4252 7339 SUDHL4_400M_050219_1,7340 SUDHL4_400M_050219_1,7340,PPKIPGGA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7341 38.934 307.0 267340.0 25 0 26293.0 + 1876 ALVSGLHGV 9 101 426.7506265869548 851.4867002407096 2 426.7500182986259 MULTI CID FTMS 0 0 0 7339 172931.671875 0.4969732018779646 2 -0.043243408203125 2 Unmodified _ALVSGLHGV_ ENST00000570360.1_1_17:3626633-3627135:-|nuORF;ENST00000572179.5_1_17:3623679-3627129:-|nuORF 24.67388899826682 0.2172451872415813 5 [{I|L}A]VS 4 5 42.747 0.0 0.0 5.0203 0.0 0.0 0.0 478.24286829166255 478.24286829166255 35.75765943524473 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + [{I|L}A]VS 5.0203 + + 71 + 1 2.28 69221.8 1.0 3087 4252 7339 SUDHL4_400M_050219_1,7341 SUDHL4_400M_050219_1,7341,ALVSGLHGV False True ALVSGLHGV 38.934192 426.750018298626 1928712.875 7339.0 ENST00000570360.1_1_17:3626633-3627135:-|nuORF;;ENST00000572179.5_1_17:3623679-3627129:-|nuORF 5.598636945088704 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7343 38.94 158.0 425860.0 25 0 48312.0 + 34249 SLQDEIQRV 9 91 544.290728685853 0 544.2905761599541 PEAK CID FTMS 0 0 0 7342 241820.359375 0.5034915332822918 -3 0.096832275390625 1 Unmodified _SLQDEIQRV_ ENSG00000065183|ENST00000349139|WDR3 39.94969957227396 0.061964645358372 5 QDE{I|L}Q 5 4 42.251 0.0 0.0 3.8884 0.0 0.0 200.115074029989 270.1570833795532 470.27215740954216 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.6549471895720985 + QDE{I|L}Q 3.8884 + + 86 + 1 2.28 57165.1 1.0 3088 4253 7342 SUDHL4_400M_050219_1,7343 SUDHL4_400M_050219_1,7343,SLQDEIQRV True True SLQDEIQRV 38.93985 544.290576159954 2104483.75 7342.0 ENSG00000065183|ENST00000349139|WDR3 5.8579362233479815 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7344 38.943 157.0 475500.0 25 0 90806.0 15746 ISAAHIIM 8 98 428.242954561548 854.471356189896 2 428.2408935427666 MULTI CID FTMS 0 0 0 7342 180919.09375 0.4911279191787573 3 -0.0825309753417968 2 Unmodified _ISAAHIIM_ ENSG00000085563|ENST00000622132|ABCB1;ENST00000488737.6_1_7:87133561-87160896:-|nuORF;nc|ENSG00000085563|P08183-2|ABCB1 5.760428011301431 0.7893668129297577 5 [YV]{M(Oxidation (M))|F} 3 7 18.785 0.0 0.0 2.1985 0.0 0.0 0.0 442.2420525612429 442.2420525612429 9.750929141624404 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YV]{M(Oxidation (M))|F} 2.1985 - 36 1 2.28 62594.5 1.0 3089 4253 7342 SUDHL4_400M_050219_1,7344 SUDHL4_400M_050219_1,7344,ISAAHIIM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7345 38.951 467.0 231160.0 25 0 21174.0 + 1777 ALSDHHIYL 9 151 534.7772920128829 1067.5400310925656 2 534.7771484255791 MULTI CID FTMS 0 0 0 7342 163927.90625 0.0247174497276266 7 -0.2022857666015625 3 Unmodified _ALSDHHIYL_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 63.562846038646086 0.0241094678104353 5 [{I|L}A][SG]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A{I|L}Y{I|L} 10 4 + 44.938 0.0 0.0 4.2095 4.2095 76.32 0.0 0.0 0.0 8.502480183341625 9.457640437841874 8.502480183341625 1.2057393120585047 0 1.218765315847925 2.0 0.535666875892183 0.0 [{I|L}A][SG]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A{I|L}Y{I|L};[{I|L}A][SG]S{[CA]|SS}A{I|L}Y{I|L};[{I|L}A]{[QC]|[C(Carbamidomethyl (C))A]}{[CA]|SS}A{I|L}Y{I|L};{[TV]|[{I|L}S]}Q{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}A{I|L}Y{I|L};[{I|L}A][SG]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AY{I|L};{[TV]|[{I|L}S]}QS{[CA]|SS}A{I|L}Y{I|L};[{I|L}A][SG]S{[CA]|SS}{I|L}AY{I|L};[{I|L}A][SG]S[MN]{I|L}Y{I|L};[{I|L}A]{[QC]|[C(Carbamidomethyl (C))A]}{[CA]|SS}{I|L}AY{I|L};{[TV]|[{I|L}S]}Q{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}AY{I|L} 4.2095;4.0965;3.9275;3.413;3.4006;3.296;3.2876;3.2237;3.1186;2.6041 -;-;-;-;-;-;-;-;-;- 1742 1 2.28 87162.8 1.0 3090 4253 7342 SUDHL4_400M_050219_1,7345 SUDHL4_400M_050219_1,7345,ALSDHHIYL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7346 38.965 800.0 198400.0 25 0 10128.0 + 31984 RVFPEKGYSF 10 138 615.3193683525769 1228.6241837719538 2 615.3189575076103 MULTI CID FTMS 0 0 0 7342 137928.0625 0.5345138654923834 6 -0.1704139709472656 4 Unmodified _RVFPEKGYSF_ ENSG00000151923|ENST00000436547|TIAL1;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000151923|Q01085-2|TIAL1 63.22749603027936 0.0281198777558511 5 [RV]{M(Oxidation (M))|F}PEKGYS{M(Oxidation (M))|F} 10 0 + 69.806 0.0 0.0 5.6816 5.6816 81.587 0.0 0.0 0.0 13.845760471140563 46.13345162442553 13.845760471140563 1.7609125905568137 0 1.2614393726401687 0.958607314841775 0.805462187404089 0.4247425010840047 + + [RV]{M(Oxidation (M))|F}PEKGYS{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PEKGSY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PEKSGY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PD[KA]YS{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PD[KA]SY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PD[KT]GY{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}PEKS[HT]E;[RV]{M(Oxidation (M))|F}{[NV]|[RG]}[TP]YS{M(Oxidation (M))|F};[{I|L}A][VS]{I|L}{I|L}C(Carbamidomethyl (C))GYS{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}{[NV]|[RG]}[TP]SY{M(Oxidation (M))|F} 5.6816;5.5383;4.5951;4.5448;4.4015;3.4582;3.3379;3.222;3.0921;3.0787 +;-;-;-;-;-;-;-;-;- + 1039 1 2.28 119534.2 0.6899999976158142 3091 4253 7342 SUDHL4_400M_050219_1,7346 SUDHL4_400M_050219_1,7346,RVFPEKGYSF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7348 38.97 133.0 450420.0 25 0 32286.0 + 41920 VQGPVGTDF 9 97 460.22969416991646 918.4448354066328 2 460.2296935915947 MULTI CID FTMS 0 0 0 7347 296446.28125 0.3973038501229654 4 -0.1284713745117187 1 Unmodified _VQGPVGTDF_ ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207 34.10243960390752 0.1078313939113124 5 {[QV]|[N{I|L}]|[RA]|[KV]}[KP]WD{M(Oxidation (M))|F} 7 4 {[QV]|[N{I|L}]|[RA]|[KV]}[KP]W + + 21.013 -4.6924 -0.7351 2.2879 2.2879 53.168 0.0 0.0 0.0 0.0 9.90417829939986 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[KP]WD{M(Oxidation (M))|F} 2.2879 - 102 + 1 2.28 57925.4 1.0 3092 4254 7347 SUDHL4_400M_050219_1,7348 SUDHL4_400M_050219_1,7348,VQGPVGTDF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7349 38.984 800.0 133560.0 25 0 10223.0 + 33865 SLFEKGLKNV 10 131 567.8298840427592 1133.6452151523183 2 567.8302490115166 MULTI CID FTMS 0 0 0 7347 80459.9375 0.7729918006609579 2 -0.0517311096191406 2 Unmodified _SLFEKGLKNV_ ENSG00000118564|ENST00000341285|FBXL5;nc|ENSG00000118564|Q9UKA1-2|FBXL5 63.22749603027936 0.0281198777558511 5 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}EKG{I|L}KNV 10 0 + 63.687 0.0 0.0 5.6179 5.6179 82.647 0.0 0.0 0.0 22.13682510463365 2.817248404685934 2.817248404685934 2.817248404685934 0 1.8539171939081167 2.0 0.3054621874040891 0.9749073637206092 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}EKG{I|L}KNV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EKG{I|L}KVN;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EKG{I|L}KGGV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[R{I|L}]{[SA]|[TG]}KNV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[{I|L}V]{[QS]|[NT]}KNV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[{I|L}V]G{[SA]|[TG]}KNV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[R{I|L}]{[SA]|[TG]}KVN;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[{I|L}V]{[QS]|[NT]}KVN;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[WQ]{I|L}K{[NV]|[RG]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[{I|L}V]G{[SA]|[TG]}KVN 5.6179;5.3694;4.9322;4.0167;3.9576;3.8512;3.7681;3.7091;3.6652;3.6027 +;-;-;-;-;-;-;-;-;- + 1433 + 1 2.28 83244.6 0.5600000023841858 3093 4254 7347 SUDHL4_400M_050219_1,7349 SUDHL4_400M_050219_1,7349,SLFEKGLKNV True True SLFEKGLKNV 38.984054 567.830249011517 419259.96875 7347.0 nc|ENSG00000118564|Q9UKA1-2|FBXL5;;ENSG00000118564|ENST00000341285|FBXL5 7.211318651835124 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7351 38.99 160.0 355760.0 25 0 51252.0 + 14681 IISGQELTY 9 94 512.2709519377909 1022.5273509423818 2 512.2712890505791 MULTI CID FTMS 0 0 0 7350 156894.03125 0.7648876578027397 3 -0.1094818115234375 1 Unmodified _IISGQELTY_ REV__ENSG00000063015|ENST00000317338|SEZ6;REV__nc|ENSG00000063015|Q53EL9-2|SEZ6;REV__nc|ENSG00000063015|Q53EL9-3|SEZ6 16.942295170755138 0.3780752226737986 5 SD{[TV]|[{I|L}S]}QH{I|L} 7 -1 22.255 0.0 0.0 2.1764 0.0 0.0 224.14204928398163 0.0 224.14204928398163 0.0 4.295926782598798 0.0 0.0 0 0.0 0.0 0.0 0.5 SD{[TV]|[{I|L}S]}QH{I|L} 2.1764 - 132 + 1 2.28 52778.2 1.0 3094 4255 7350 SUDHL4_400M_050219_1,7351 SUDHL4_400M_050219_1,7351,IISGQELTY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7352 38.997 382.0 250990.0 25 0 25153.0 + 25762 NIVERLKEV 9 133 550.3267572055057 1098.638961477811 2 550.3270751833916 MULTI CID FTMS 0 0 0 7350 132852.046875 0.5744586966885356 -1 0.0189895629882812 2 Unmodified _NIVERLKEV_ ENSG00000258659|ENST00000429814|TRIM34;ENST00000491385.1_1_11:5653561-5662456:+|nuORF;nc|ENSG00000258659|Q9BYJ4-2|TRIM34 45.739877483867886 0.0497104363764649 5 VQVE 4 7 63.716 0.0 0.0 5.7996 0.0 0.0 0.0 640.3793429010374 640.3793429010374 45.61751581724352 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.9247425010840048 0.0 VQVE 5.7996 - 323 + 1 2.28 76028.6 1.0 3095 4255 7350 SUDHL4_400M_050219_1,7352 SUDHL4_400M_050219_1,7352,NIVERLKEV True True NIVERLKEV 38.996545 550.327075183392 1022773.375 7350.0 nc|ENSG00000258659|Q9BYJ4-2|TRIM34;;ENST00000491385.1_1_11:5653561-5662456:+|nuORF;;ENSG00000258659|ENST00000429814|TRIM34 3.43191667397817 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7353 39.001 217.0 422670.0 25 0 72612.0 + 16236 IVNRLLPSA 9 96 491.8058816701979 981.5972104071958 2 491.8054992556572 MULTI CID FTMS 0 0 0 7350 185119.890625 0.0709024879081829 -6 0.2219276428222656 3 Unmodified _IVNRLLPSA_ REV__ENSG00000222018|ENST00000410005|C21orf140 39.957323273325 0.0756908302845263 5 V{I|L}{[CA]|SS}N 5 -1 50.445 0.0 0.0 5.1391 0.0 0.0 0.0 478.3158053033813 478.3158053033813 35.29545237941676 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.3494850021680094 V{I|L}{[CA]|SS}N 5.1391 - 288 + 1 2.28 75292.0 1.0 3096 4255 7350 SUDHL4_400M_050219_1,7353 SUDHL4_400M_050219_1,7353,IVNRLLPSA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7354 39.006 279.0 245490.0 25 0 14584.0 + 13374 HLIEPLANA 9 108 489.2746834255536 976.5348139179072 2 489.2741577029228 MULTI CID FTMS 0 0 0 7350 130678.3359375 0.4895880603788005 -2 0.0497894287109375 4 Unmodified _HLIEPLANA_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 57.47134341890925 0.0274820932774257 5 [H{I|L}]{I|L}EP{I|L}A{[QG]|[NA]} 9 0 + 56.543 0.0 0.0 5.7902 5.7902 92.3 0.0 0.0 0.0 17.191512336730028 44.94933153297752 17.191512336730028 22.47425010840046 0 0.8494850021680094 1.154901959985743 0.2396518287104437 0.0 + + [H{I|L}]{I|L}EP{I|L}A{[QG]|[NA]};[H{I|L}]{I|L}EP[KG][PS];[H{I|L}]{I|L}[{I|L}A][EP]{[QG]|[NA]};HH{I|L}[KG]WS{I|L} 5.7902;3.4888;1.4746;0.82378 +;-;-;- + 176 1 2.28 57892.1 1.0 3097 4255 7350 SUDHL4_400M_050219_1,7354 SUDHL4_400M_050219_1,7354,HLIEPLANA True True HLIEPLANA 39.005777 489.274157702923 1403363.25 7350.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 5.449787775675456 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7355 39.01 206.0 222580.0 25 0 15525.0 + 16254 IVRHYRPA 8 87 506.29558083844574 1010.5766087436916 2 506.2962829470634 MULTI CID FTMS 0 0 0 7350 94436.1953125 0.7600470898685103 -3 0.0622329711914062 5 Unmodified _IVRHYRPA_ REV__ENSG00000187266|ENST00000222139|EPOR;REV__nc|ENSG00000187266|P19235-2|EPOR;REV__nc|ENSG00000187266|P19235-3|EPOR 14.581692164780916 0.6954967302934248 5 [VS]YR 4 -1 32.708 0.0 0.0 3.2366 0.0 0.0 0.0 502.2837936166372 502.2837936166372 20.92538538971956 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.3494850021680094 0.0 [VS]YR 3.2366 - 106 1 2.28 44201.2 1.0 3098 4255 7350 SUDHL4_400M_050219_1,7355 SUDHL4_400M_050219_1,7355,IVRHYRPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7356 39.017 396.0 106600.0 25 0 6681.9 + 5351 DLIDEQILEW 10 74 637.3208064678556 1272.6270600025111 2 637.3212768435478 MULTI CID FTMS 0 0 0 7350 91847.9375 0.967430528348841 -1 0.0189895629882812 6 Unmodified _DLIDEQILEW_ REV__ENSG00000133636|ENST00000256010|NTS 12.240655878213236 0.6421556946785427 5 [MT]T{I|L}EKGP[NS][VP] 12 -1 + 54.9 0.0 0.0 4.3139 4.3139 80.993 0.0 0.0 0.0 35.295540574256776 4.71726222832956 4.71726222832956 4.893806226642283 0 0.0 1.5228787452803376 0.3807196863200844 0.0 [MT]T{I|L}EKGP[NS][VP];{[TV]|[{I|L}S]}{[QS]|[NT]}PGKE{I|L}EW;[{I|L}T][NS]PGKE{I|L}EW;[MT]T{I|L}EKGP[TA][QP];{[QD]|[EN]|[WG]|[KD]|[RS]}[TA]PGKE{I|L}EW;[MT]T{I|L}[WQ]P[NS][VP];[QP]{[WT]|[RM]}GKE{I|L}EW;[MT]{[QN]|[E{I|L}]|[KN]}TKGP[NS][VP];[MT]T{I|L}E[RH]{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};[MT]T{I|L}E[RH]{[TV]|[{I|L}S]}W 4.3139;3.9293;3.8972;3.8408;3.6396;2.794;2.6708;2.5413;2.5355;2.3525 -;-;-;-;-;-;-;-;-;- 270 + 1 2.28 40056.8 1.0 3099 4255 7350 SUDHL4_400M_050219_1,7356 SUDHL4_400M_050219_1,7356,DLIDEQILEW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7358 39.022 45.0 1239400.0 25 0 187690.0 + 12963 HAIPPTLAM 9 80 475.7597802154014 949.5050074976028 2 475.7597534060478 MULTI CID FTMS 0 0 0 7357 1249106.375 0.90937923135424 5 -0.1572952270507812 1 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 5 [HA]{I|L}P[TP]{I|L}AM 9 0 + 33.038 0.0 0.0 3.4795 3.4795 77.966 0.0 0.0 0.0 3.9794000867203785 4.928702923165396 3.9794000867203785 3.9794000867203785 0 0.8935078169319297 0.0 1.0 0.0 + + [HA]{I|L}P[TP]{I|L}AM;[{I|L}A]HP[TP]{I|L}AM;[YG]{I|L}[TP][R{I|L}]M;[YG]{I|L}[TP]P[R{M(Oxidation (M))|F}];[HT][RH]P[R{M(Oxidation (M))|F}];[HT][RH][R{I|L}]M 3.4795;3.0604;2.6998;2.6998;1.0791;1.0791 +;-;-;-;-;- + 131 1 2.28 48751.5 1.0 3100 4256 7357 SUDHL4_400M_050219_1,7358 SUDHL4_400M_050219_1,7358,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7359 39.032 593.0 173480.0 25 0 12488.0 + 3174 AVVEPYNSI 9 136 496.2572519089896 990.4999508847792 2 496.2579223513603 MULTI CID FTMS 0 0 0 7357 110019.2734375 0.6617474270617058 -4 0.0949745178222656 2 Unmodified _AVVEPYNSI_ chr2:219252230-219277814|45|11.58|0.35|5.03|-|ENST00000427737|TUBA4A,TUBA4A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C 78.14939416004806 0.0179651292570206 5 {[VA]|[{I|L}G]}VEP 5 4 46.427 0.0 0.0 4.6872 0.0 0.0 0.0 492.2096259558779 492.2096259558779 14.47621246364342 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.2742275032520141 0.0 + {[VA]|[{I|L}G]}VEP 4.6872 + + 606 1 2.28 82026.9 1.0 3101 4256 7357 SUDHL4_400M_050219_1,7359 SUDHL4_400M_050219_1,7359,AVVEPYNSI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7361 39.037 118.0 553450.0 25 0 72864.0 -1 0 99 360.2066713747384 359.1993949081384 1 360.2063476443291 MULTI CID FTMS 0 0 0 7360 486317.5 0.1110697472586138 8 -0.4143142700195312 1 5 P 1 -1 8.4518 0.0 0.0 2.353 0.0 0.0 244.13565697044152 0.0 244.13565697044152 0.0 6.233361666706941 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.353 - 5 + 1 2.28 58689.4 1.0 3102 4257 7360 SUDHL4_400M_050219_1,7361 SUDHL4_400M_050219_1,7361, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7362 39.04 181.0 678410.0 25 0 85603.0 + 31716 RRRLKEKDEVA 11 76 467.2768669764855 1398.8087715296565 3 467.2772094607353 MULTI CID FTMS 0 0 0 7360 378318.5625 0.0132205949674743 -5 0.1100692749023437 2 Unmodified _RRRLKEKDEVA_ ENSG00000134030|ENST00000256413|CTIF 8.155526934196011 0.8366696279279818 5 AVA 3 9 26.682 0.0 0.0 1.9075 0.0 0.0 1139.6575676133834 0.0 1139.6575676133834 0.0 12.692868669034285 0.0 0.0 0 0.5 0.0 0.0 0.0 AVA 1.9075 - 65 1 2.28 101655.2 1.0 3103 4257 7360 SUDHL4_400M_050219_1,7362 SUDHL4_400M_050219_1,7362,RRRLKEKDEVA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7363 39.045 232.0 298620.0 25 0 31879.0 + 18895 LAVHPSGVAL 10 108 482.2847642679197 962.5549756026396 2 482.2848388552666 MULTI CID FTMS 0 0 0 7360 253310.734375 0.6250996534243223 -2 0.0478363037109375 3 Unmodified _LAVHPSGVAL_ ENSG00000187608|ENST00000649529|ISG15 46.020951573049366 0.1035046897853725 5 [{I|L}A][HV][PS]GVA{I|L} 10 0 + 51.872 0.0 0.0 5.389 5.389 89.704 0.0 0.0 0.0 10.97695185925513 16.532125137753432 10.97695185925513 10.97695185925513 0 1.424742501084005 1.3979400086720375 0.0 0.0 + + [{I|L}A][HV][PS]GVA{I|L};{[TV]|[{I|L}S]}[NP]H{I|L}VA{I|L};{[TV]|[{I|L}S]}[NP]HV{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T[R{I|L}]GVA{I|L};{[TV]|[{I|L}S]}[NP]{I|L}HVA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{[NV]|[RG]}{I|L}VA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{[NV]|[RG]}V{I|L}A{I|L};{[ET]|[MV]}K[R{I|L}]{[CT]|[{M(Oxidation (M))|F}G]}{I|L} 5.389;4.2486;3.9359;3.8782;3.8061;3.6952;3.3825;1.1286 +;-;-;-;-;-;-;- + 224 1 2.28 57690.9 1.0 3104 4257 7360 SUDHL4_400M_050219_1,7363 SUDHL4_400M_050219_1,7363,LAVHPSGVAL True True LAVHPSGVAL 39.044641 482.284838855267 1781109.125 7360.0 ENSG00000187608|ENST00000649529|ISG15 6.548689842224121 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7364 39.05 280.0 209140.0 25 0 23554.0 + 26500 NVAWMVWD 8 96 510.7351680242817 0 510.7350646853447 PEAK CID FTMS 0 0 0 7360 113400.8125 0.4387545351125044 -4 0.097625732421875 4 Unmodified _NVAWMVWD_ REV__ENSG00000134954|ENST00000392668|ETS1;REV__nc|ENSG00000134954|P14921-2|ETS1;REV__nc|ENSG00000134954|P14921-5|ETS1;REV__nc|ENSG00000134954|P14921|ETS1 13.50788311687929 0.5021269579892848 5 EN{M(Oxidation (M))|F}S 4 -1 19.17 0.0 0.0 1.8804 0.0 0.0 330.19267383977586 209.05727564029533 539.2499494800712 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.75 EN{M(Oxidation (M))|F}S 1.8804 - 35 + 1 2.28 50488.5 1.0 3105 4257 7360 SUDHL4_400M_050219_1,7364 SUDHL4_400M_050219_1,7364,NVAWMVWD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7365 39.064 800.0 122340.0 25 0 6302.4 + 17429 KMYSTDDGVQF 11 118 645.7865386748985 1289.5585244165968 2 645.7878295779228 MULTI CID FTMS 0 0 0 7360 94098.0625 0.9478672508379828 -1 0.0150947570800781 5 Unmodified _KMYSTDDGVQF_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000586276.5_1_17:42937766-42940268:-|nuORF;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 24.881564428377168 0.5079759154518888 5 DGVQ{M(Oxidation (M))|F} 5 6 49.821 0.0 0.0 3.8634 0.0 0.0 725.3057428950433 0.0 725.3057428950433 0.0 32.05640906739358 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 + DGVQ{M(Oxidation (M))|F} 3.8634 + + 154 1 2.28 78082.8 0.6000000238418579 3106 4257 7360 SUDHL4_400M_050219_1,7365 SUDHL4_400M_050219_1,7365,KMYSTDDGVQF False True KMYSTDDGVQF 39.063647 645.787829577923 490432.21875 7360.0 ENST00000586276.5_1_17:42937766-42940268:-|nuORF;;nc|ENSG00000108883|Q15029-3|EFTUD2;;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 5.9624044100443525 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7366 39.077 800.0 80383.0 25 0 8192.0 -1 QECMSSCQGSL 11 108 651.7445079373135 1301.474462941427 2 652.2469970583916 MULTI CID FTMS 0 0 0 7360 85217.140625 0.6268687887353666 -4 0.097625732421875 6 2 Carbamidomethyl (C),Oxidation (M) _QEC(Carbamidomethyl (C))M(Oxidation (M))SSC(Carbamidomethyl (C))QGSL_ ENSG00000100767|ENST00000644200|PAPLN;ENST00000554314.1_1_14:73727947-73731040:+|nuORF;ENST00000555700.1_1_14:73729065-73729536:+|nuORF;nc|ENSG00000100767|O95428-4|PAPLN;nc|ENSG00000100767|O95428-5|PAPLN;nc|ENSG00000100767|O95428-6|PAPLN 8.745405648335112 0.8338865417133445 5 S{I|L} 2 -1 22.206 0.0 0.0 1.7062 0.0 0.0 1083.3475536170113 0.0 1083.3475536170113 0.0 11.237125054200234 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 S{I|L} 1.7062 + + 66 + 1 2.28 59348.5 0.5799999833106995 3107 4257 7360 SUDHL4_400M_050219_1,7366 SUDHL4_400M_050219_1,7366,QECMSSCQGSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7367 39.08 143.0 789240.0 25 0 87071.0 + 42575 VTQIRLVSA 9 91 493.8030937754364 985.5916346176728 2 493.8029357790947 MULTI CID FTMS 0 0 0 7360 370329.0625 0.2332392151861264 -4 0.097625732421875 7 Unmodified _VTQIRLVSA_ REV__ENSG00000119574|ENST00000594051|ZBTB45 49.93300154707207 0.0405168250806675 5 SQ{I|L}VSA 6 -1 39.302 0.0 0.0 3.9876 0.0 0.0 382.26915175605626 0.0 382.26915175605626 0.0 1.003501351953858 0.0 0.0 0 1.1435078169319297 0.0 0.6989700043360187 0.3252574989159953 SQ{I|L}VSA 3.9876 - 285 1 2.28 91625.1 1.0 3108 4257 7360 SUDHL4_400M_050219_1,7367 SUDHL4_400M_050219_1,7367,VTQIRLVSA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7368 39.083 122.0 636970.0 25 0 155230.0 -1 0 78 459.2803242751864 458.27304780858645 1 459.2798339724541 MULTI CID FTMS 0 0 0 7360 280235.78125 0.884109610703869 1 -0.0616455078125 8 5 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 2.722 0.0 0.0 293.1936238357333 0.0 293.1936238357333 0.0 1.365006360318688 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.722 - 11 + 1 2.28 64562.1 1.0 3109 4257 7360 SUDHL4_400M_050219_1,7368 SUDHL4_400M_050219_1,7368, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7369 39.086 142.0 464300.0 25 0 63386.0 + 16973 KISTITPQI 9 88 500.80575672371214 999.5969605142244 2 500.8052856326103 MULTI CID FTMS 0 0 0 7360 264305.03125 0.9676567218003272 -2 0.0478363037109375 9 Unmodified _KISTITPQI_ ENSG00000004897|ENST00000066544|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 39.94969957227396 0.0757326808254658 5 TPQ{I|L} 4 5 37.123 0.0 0.0 3.7138 0.0 0.0 542.3432506526993 0.0 542.3432506526993 0.0 25.70268251373741 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.7742275032520141 + TPQ{I|L} 3.7138 + + 113 + 1 2.28 56305.3 1.0 3110 4257 7360 SUDHL4_400M_050219_1,7369 SUDHL4_400M_050219_1,7369,KISTITPQI True True KISTITPQI 39.085703 500.80528563261 1677346.125 7360.0 ENSG00000004897|ENST00000066544|CDC27;;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;;nc|ENSG00000004897|P30260-2|CDC27 2.126747101545334 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7370 39.094 372.0 1055700.0 25 0 349170.0 40494 VIRRWVYPLTP 11 104 700.4116434584598 1398.8087339837195 2 700.4118530154228 MULTI CID FTMS 0 0 0 7360 119450.5859375 0.0115855384807238 -5 0.1100692749023437 10 Unmodified _VIRRWVYPLTP_ ENSG00000145191|ENST00000648915|EIF2B5;ENST00000479833.1_1_3:183855956-183859823:+|nuORF;ENST00000491144.5_1_3:183857994-183862728:+|nuORF;ENST00000493740.1_1_3:183857994-183858625:+|nuORF 22.736283301280096 0.5583477779825423 5 [{I|L}V]{M(Oxidation (M))|F}RG 5 8 26.879 0.0 0.0 1.9216 0.0 0.0 0.0 823.4408053033811 823.4408053033811 5.425515300088435 0.0 0.0 0.0 0 0.9291746928241126 1.6989700043360187 0.0 0.3494850021680094 [{I|L}V]{M(Oxidation (M))|F}RG 1.9216 - 194 + 1 2.28 273096.4 1.0 3111 4257 7360 SUDHL4_400M_050219_1,7370 SUDHL4_400M_050219_1,7370,VIRRWVYPLTP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7372 39.1 140.0 390940.0 25 0 50045.0 21015 LNVSIMAIP 9 93 479.277087279864 956.539621626528 2 479.2756225466728 MULTI CID FTMS 0 0 0 7371 167772.640625 0.233780366335955 -6 0.1717147827148437 1 Unmodified _LNVSIMAIP_ ENSG00000188452|ENST00000410087|CERKL;nc|ENSG00000188452|Q49MI3-3|CERKL;nc|ENSG00000188452|Q49MI3-4|CERKL;nc|ENSG00000188452|Q49MI3-9|CERKL;nc|ENSG00000188452|Q49MI3|CERKL 4.75600775471527 0.7486543447549536 5 R 1 9 6.9897 0.0 0.0 0.73073 0.0 0.0 322.2108995579717 475.2164448228048 797.4273443807765 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.73073 - 9 + 1 2.275 47299.1 1.0 3112 4258 7371 SUDHL4_400M_050219_1,7372 SUDHL4_400M_050219_1,7372,LNVSIMAIP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7373 39.105 247.0 317150.0 25 0 31082.0 + 2060 APLPPHLPGA 10 117 485.2792959137977 968.5440388943954 2 485.2787963747978 MULTI CID FTMS 0 0 0 7371 142212.46875 0.4956813583336528 67 -3.945789337158203 2 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 24.67388899826682 0.4143206957119831 5 [PA]{I|L} 3 7 26.796 0.0 0.0 2.7666 0.0 0.0 0.0 684.3476637325391 684.3476637325391 10.663931154357794 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + [PA]{I|L} 2.7666 + + 277 1 2.275 67407.9 1.0 3113 4258 7371 SUDHL4_400M_050219_1,7373 SUDHL4_400M_050219_1,7373,APLPPHLPGA False True False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 7375 39.109 45.0 1115300.0 25 0 88658.0 + 42649 VTVPPGPSL 9 80 433.75257015636254 0 433.7527038455009 PEAK CID FTMS 0 0 0 7374 916680.25 0.1062573751185235 -3 0.0878829956054687 1 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 81.61307344734483 0.0128847307415601 5 PPGPS 5 4 29.558 0.0 0.0 3.4151 0.0 0.0 299.1830254040321 128.07215295963127 427.2551783636634 0.0 0.0 0.0 0.0 0 0.6989700043360187 0.0 1.3807196863200843 0.0 + PPGPS 3.4151 + + 158 + 1 2.275 44788.5 1.0 3114 4259 7374 SUDHL4_400M_050219_1,7375 SUDHL4_400M_050219_1,7375,VTVPPGPSL True True VTVPPGPSL 39.109386 433.752703845501 556148876.0 7374.0 nc|ENSG00000159352|P55036-2|PSMD4;;ENSG00000159352|ENST00000368884|PSMD4;;nc|ENSG00000180764|A2A3N6|PIPSL;;ENST00000480546.1_1_10:95718567-95721153:-|nuORF 7.47788143157959 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7376 39.111 68.0 924130.0 25 0 86477.0 + 31303 RLYQGINQL 9 89 552.8114573729682 1103.6083618127363 2 552.8118774294853 MULTI CID FTMS 0 0 0 7374 769303.3125 0.3048855539739331 -3 0.0878829956054687 2 Unmodified _RLYQGINQL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 74.92900055777586 0.0191935851694334 5 [R{I|L}]YQG{I|L}NQ{I|L} 9 0 + 73.259 0.0 0.0 6.6381 6.6381 91.631 0.0 0.0 0.0 0.9691001300805624 57.395526969126095 0.9691001300805624 9.208187539523747 0 1.3243923658886183 0.0 0.0 1.1421590589602533 + + [R{I|L}]YQG{I|L}NQ{I|L};[R{I|L}]Y[AG]G{I|L}NQ{I|L};[R{I|L}]YQG{I|L}N[AG]{I|L};[R{I|L}]YQG{I|L}GGQ{I|L};[VP][HV]QG{I|L}NQ{I|L};[Q{I|L}][YR]G{I|L}NQ{I|L};[R{I|L}]YQG{I|L}GG[AG]{I|L};[R{I|L}]Y[AG]G{I|L}N[AG]{I|L};[R{I|L}]Y[AG]G{I|L}GGQ{I|L};[VP][HV]QG{I|L}GGQ{I|L} 6.6381;5.8038;5.8038;5.8038;5.8038;5.7574;4.9734;4.9734;4.9734;4.9734 +;-;-;-;-;-;-;-;-;- + 319 1 2.275 54585.1 1.0 3115 4259 7374 SUDHL4_400M_050219_1,7376 SUDHL4_400M_050219_1,7376,RLYQGINQL True True RLYQGINQL 39.111015 552.811877429485 13129885.0 7374.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 8.044465065002441 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7377 39.114 177.0 352790.0 25 0 67393.0 + 13528 HNSLAQIL 8 96 448.2541060820863 894.4936592309725 2 448.2539550662041 MULTI CID FTMS 0 0 0 7374 338524.21875 0.434237697986519 -5 0.1396141052246093 3 Unmodified _HNSLAQIL_ REV__ENSG00000136463|ENST00000258975|TACO1 19.256988751693697 0.6264283240490721 5 {I|L}A[Q{I|L}]{I|L} 5 -1 21.198 0.0 0.0 2.3698 0.0 0.0 338.13411147285314 0.0 338.13411147285314 0.0 17.21848749616356 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {I|L}A[Q{I|L}]{I|L} 2.3698 + + 82 1 2.275 54982.6 1.0 3116 4259 7374 SUDHL4_400M_050219_1,7377 SUDHL4_400M_050219_1,7377,HNSLAQIL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7378 39.118 196.0 513860.0 25 0 29949.0 + 11362 GGAIKAQG 8 126 351.2003031906634 700.3860534481269 2 351.2003967165947 MULTI CID FTMS 0 0 0 7374 187820.234375 1.0 0 0.0 4 Unmodified _GGAIKAQG_ REV__ENSG00000104518|ENST00000262580|GSDMD;REV__ENST00000531184.5_1_8:144641759-144643375:+|nuORF 2.577480529830294 0.808687252328423 5 W 1 -1 11.783 0.0 0.0 1.6823 0.0 0.0 496.2960551344534 0.0 496.2960551344534 0.0 3.1535258638874595 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.6823 - 30 + 1 2.275 82283.7 1.0 3117 4259 7374 SUDHL4_400M_050219_1,7378 SUDHL4_400M_050219_1,7378,GGAIKAQG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7379 39.123 249.0 293200.0 25 0 34842.0 42939 VVSGFTTL 8 112 412.23068911483887 822.4468252964778 2 412.2307006716728 MULTI CID FTMS 0 0 0 7374 145175.03125 0.3009629958638976 -9 0.2672462463378906 5 Unmodified _VVSGFTTL_ ENSG00000181143|ENST00000397910|MUC16 2.577480529830294 0.808687252328423 5 P 1 8 10.0 0.0 0.0 1.2159 0.0 0.0 707.3830263236247 0.0 707.3830263236247 0.0 1.8645600148505324 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.2159 - 10 + 1 2.275 60320.9 1.0 3118 4259 7374 SUDHL4_400M_050219_1,7379 SUDHL4_400M_050219_1,7379,VVSGFTTL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7380 39.137 800.0 140000.0 25 0 13681.0 + -1 TFDGAQCMFSP 11 147 610.2416864930367 1218.4688200528733 2 610.2421142458916 MULTI CID FTMS 0 0 0 7374 113844.359375 0.7854426116829597 -2 0.0727882385253906 6 Oxidation (M) _TFDGAQCM(Oxidation (M))FSP_ REV__ENSG00000108179|ENST00000225174|PPIF;REV__nc|ENSG00000108179|P30405-2|PPIF 17.11289562659939 0.6791789249425932 5 ND[{M(Oxidation (M))|F}T]YQ{I|L} 7 -1 20.269 0.0 0.0 1.6635 0.0 0.0 319.06675917793126 0.0 319.06675917793126 0.0 2.8208381699927543 0.0 0.0 0 0.4929928190999391 0.0 0.0 1.4291746928241125 ND[{M(Oxidation (M))|F}T]YQ{I|L} 1.6635 - 391 1 2.275 85433.8 0.6499999761581421 3119 4259 7374 SUDHL4_400M_050219_1,7380 SUDHL4_400M_050219_1,7380,TFDGAQCMFSP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7382 39.147 425.0 296020.0 25 0 36567.0 -1 0 73 905.4481875083465 1808.8818220834928 2 905.9500610232352 MULTI CID FTMS 0 0 0 7381 207795.5 0.2204572265723815 -3 0.1046600341796875 1 5 [H{I|L}]PN{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}M 8 -1 43.862 0.0 0.0 2.4248 0.0 0.0 0.0 857.3945997745042 857.3945997745042 21.16199598849829 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.4247425010840047 [H{I|L}]PN{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}M 2.4248 - 79 + 1 2.275 87898.7 1.0 3120 4260 7381 SUDHL4_400M_050219_1,7382 SUDHL4_400M_050219_1,7382, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7383 39.148 49.0 921670.0 25 0 100390.0 -1 0 63 603.9679561883057 1808.882039165117 3 604.3029052615166 MULTI CID FTMS 0 0 0 7381 941184.875 0.350138916648244 -3 0.1046600341796875 2 5 {I|L}Q 2 -1 27.831 0.0 0.0 1.5386 0.0 0.0 1549.7288847235138 0.0 1549.7288847235138 0.0 11.63303128443836 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 {I|L}Q 1.5386 - 35 + 1 2.275 41422.2 1.0 3121 4260 7381 SUDHL4_400M_050219_1,7383 SUDHL4_400M_050219_1,7383, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7384 39.15 97.0 364680.0 25 0 35028.0 + 18790 LAPLGDSMT 9 61 452.725870404393 903.437187875586 2 452.7265197634697 MULTI CID FTMS 0 0 0 7381 351889.75 1.0 0 0.0 3 Unmodified _LAPLGDSMT_ REV__ENSG00000138688|ENST00000679879|BLTP1;REV__nc|ENSG00000138688|Q2LD37-2|BLTP1;REV__nc|ENSG00000138688|Q2LD37-4|BLTP1;REV__nc|ENSG00000138688|Q2LD37-6|BLTP1;REV__nc|ENSG00000138688|Q2LD37-7|BLTP1;REV__nc|ENSG00000138688|Q2LD37|BLTP1 11.640296217721598 0.521594087909532 5 {I|L}S 2 -1 24.776 0.0 0.0 2.7424 0.0 0.0 0.0 700.3005993791058 700.3005993791058 17.78659694992122 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 {I|L}S 2.7424 - 5 + 1 2.275 35435.1 1.0 3122 4260 7381 SUDHL4_400M_050219_1,7384 SUDHL4_400M_050219_1,7384,LAPLGDSMT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7385 39.153 154.0 482760.0 25 0 210850.0 + 27275 PHGKVSSK 8 90 420.240723378679 0 420.2410766482353 PEAK CID FTMS 0 0 0 7381 295131.625 0.3753328997734222 5 -0.3096542358398437 4 Unmodified _PHGKVSSK_ REV__ENSG00000135315|ENST00000403245|CEP162;REV__ENST00000497936.5_1_6:84884653-84936120:-|nuORF;REV__nc|ENSG00000135315|Q5TB80-2|CEP162 2.059750862983233 0.5930426321653702 5 H 1 -1 5.4846 0.0 0.0 0.65412 0.0 0.0 419.2321017461033 279.1453646295532 698.3774663756565 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.65412 + + 3 + 1 2.275 63936.7 1.0 3123 4260 7381 SUDHL4_400M_050219_1,7385 SUDHL4_400M_050219_1,7385,PHGKVSSK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7386 39.155 99.0 418260.0 25 0 51836.0 34548 SPCAGLLG 8 79 359.18325078473526 716.3519486362705 2 359.1827270388603 MULTI CID FTMS 0 0 0 7381 291991.40625 1.0 0 0.0 5 Unmodified _SPCAGLLG_ ENSG00000177875|ENST00000316554|CCDC184 0.7936320650641473 0.8195151834710337 5 P 1 7 4.6041 0.0 0.0 0.64271 0.0 0.0 531.2457149710347 85.03028284244374 616.2759978134784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.64271 + + 3 + 1 2.275 39113.9 1.0 3124 4260 7381 SUDHL4_400M_050219_1,7386 SUDHL4_400M_050219_1,7386,SPCAGLLG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7387 39.157 108.0 499600.0 25 0 44091.0 + 1636 ALMDEVVKA 9 91 488.26461110595545 0 488.2632018923759 PEAK CID FTMS 0 0 0 7381 236604.453125 0.7018757803738972 -1 0.0318717956542968 6 Unmodified _ALMDEVVKA_ ENSG00000102144|ENST00000373316|PGK1;nc|ENSG00000102144|P00558-2|PGK1 19.256988751693697 0.2078072434435185 5 M 1 8 11.237 0.0 0.0 1.1531 0.0 0.0 184.1258390785569 656.3276697295815 840.4535088081384 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + M 1.1531 + + 121 + 1 2.275 45555.8 1.0 3125 4260 7381 SUDHL4_400M_050219_1,7387 SUDHL4_400M_050219_1,7387,ALMDEVVKA False True ALMDEVVKA 39.157473 488.263201892376 1729598.25 7381.0 nc|ENSG00000102144|P00558-2|PGK1;;ENSG00000102144|ENST00000373316|PGK1 3.9435894091924033 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7388 39.161 152.0 328910.0 25 0 22322.0 + 13315 HLAIKLEQV 9 95 525.8186764295571 1049.622799925914 2 525.8187744021416 MULTI CID FTMS 0 0 0 7381 151598.171875 0.7886503182430664 1 -0.0375404357910156 7 Unmodified _HLAIKLEQV_ ENSG00000145041|ENST00000684031|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1 29.081581746732265 0.1611639662936252 5 [H{I|L}]A{I|L}P{I|L} 6 4 41.661 0.0 0.0 3.9691 0.0 0.0 0.0 402.1989635857323 402.1989635857323 24.21327198560853 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.0 0.0 [H{I|L}]A{I|L}P{I|L} 3.9691 - 136 1 2.275 47142.6 1.0 3126 4260 7381 SUDHL4_400M_050219_1,7388 SUDHL4_400M_050219_1,7388,HLAIKLEQV False True HLAIKLEQV 39.160509 525.818774402142 847199.4375 7381.0 nc|ENSG00000145041|Q9Y4B6-2|DCAF1;;ENSG00000145041|ENST00000684031|DCAF1 5.153038660685222 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7389 39.174 800.0 1325400.0 25 0 271120.0 -1 VAIPMPRLRNK 11 130 655.8879400267618 1309.7613271203236 2 655.8887206912041 MULTI CID FTMS 0 0 0 7381 115309.078125 0.1866678426921114 -2 0.0430145263671875 8 Oxidation (M) _VAIPM(Oxidation (M))PRLRNK_ ENSG00000186094|ENST00000371839|AGBL4 18.1463463914782 0.6576820063886638 5 VA{I|L} 3 -1 38.887 0.0 0.0 2.969 0.0 0.0 0.0 1023.5490015205356 1023.5490015205356 15.330025624816336 0.0 0.0 0.0 0 0.4105162882498865 1.3979400086720375 0.0 0.0 VA{I|L} 2.969 + + 409 + 1 2.275 739355.8 0.6499999761581421 3127 4260 7381 SUDHL4_400M_050219_1,7389 SUDHL4_400M_050219_1,7389,VAIPMPRLRNK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7391 39.18 154.0 403550.0 25 0 45200.0 + 30978 RLAVYIDKV 9 71 538.8263590097329 1075.6381650862656 2 538.8270751833916 MULTI CID FTMS 0 0 0 7390 339946.5 0.1640455363151733 5 -0.3365402221679687 1 Unmodified _RLAVYIDKV_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 17.11289562659939 0.3734572693229295 5 D{I|L}Y 3 7 25.445 0.0 0.0 2.3656 0.0 0.0 245.1716227727973 436.2692389114813 681.4408616842786 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 D{I|L}Y 2.3656 - 47 + 1 2.275 53425.2 1.0 3128 4261 7390 SUDHL4_400M_050219_1,7391 SUDHL4_400M_050219_1,7391,RLAVYIDKV False True RLAVYIDKV 39.179619 538.827075183392 19815874.0 7390.0 chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;;ENSG00000113368|ENST00000261366|LMNB1 6.4073060353597 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7392 39.182 100.0 619470.0 25 0 41080.0 + 20079 LIVLDQVQQ 9 83 528.3078016900398 1054.6010504468795 2 528.3085204958916 MULTI CID FTMS 0 0 0 7390 292527.3125 0.3195493218608541 5 -0.3365402221679687 2 Unmodified _LIVLDQVQQ_ REV__ENSG00000129315|ENST00000261900|CCNT1;REV__nc|ENSG00000129315|O60563-2|CCNT1 19.256988751693697 0.3154191944385105 5 {I|L}{I|L}VE 4 -1 45.049 0.0 0.0 4.2717 0.0 0.0 0.0 597.301900223654 597.301900223654 27.05640906739358 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3807196863200844 0.0 {I|L}{I|L}VE 4.2717 - 112 + 1 2.275 57632.0 1.0 3129 4261 7390 SUDHL4_400M_050219_1,7392 SUDHL4_400M_050219_1,7392,LIVLDQVQQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7393 39.184 122.0 520590.0 25 0 63138.0 + 10362 FSLREEVQ 8 88 504.2615852139479 1006.5086174946958 2 504.2626830935478 MULTI CID FTMS 0 0 0 7390 304379.875 1.0 0 0.0 3 Unmodified _FSLREEVQ_ REV__ENSG00000101361|ENST00000329276|NOP56;REV__ENST00000462630.5_1_20:2637388-2638937:+|nuORF;REV__ENST00000466447.5_1_20:2636822-2638033:+|nuORF;REV__ENST00000471023.1_1_20:2637149-2637577:+|nuORF;REV__ENST00000490753.1_1_20:2637050-2637903:+|nuORF;REV__ENST00000492135.5_1_20:2636822-2638937:+|nuORF 26.88365393820708 0.4786498634179528 5 TGESE 5 -1 42.959 0.0 0.0 4.2681 0.0 0.0 485.28367812324376 0.0 485.28367812324376 0.0 31.69974030847176 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 TGESE 4.2681 - 61 1 2.275 53917.2 1.0 3130 4261 7390 SUDHL4_400M_050219_1,7393 SUDHL4_400M_050219_1,7393,FSLREEVQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7394 39.189 249.0 265990.0 25 0 12490.0 + 39658 VEDDFSNQL 9 120 533.7375321308311 1065.4605113284622 2 533.7378417849541 MULTI CID FTMS 0 0 0 7390 122420.1875 1.0 0 0.0 4 Unmodified _VEDDFSNQL_ ENSG00000127922|ENST00000248566|SEM1;ENST00000482389.1_1_7:96318238-96324219:-|nuORF;ENST00000506694.1_1_5:81188309-81188512:+|nuORF 26.88365393820708 0.1891292719743517 5 {NN|[MP]|[D{I|L}]|[EV]}Q 3 6 27.804 0.0 0.0 2.6096 0.0 0.0 0.0 706.2694767427778 706.2694767427778 6.377268672201453 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}Q 2.6096 - 169 1 2.275 57874.5 1.0 3131 4261 7390 SUDHL4_400M_050219_1,7394 SUDHL4_400M_050219_1,7394,VEDDFSNQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7395 39.199 577.0 282490.0 25 0 36977.0 + -1 LSDITDFCT 9 173 536.2368977657023 1070.4592425982046 2 536.2369872927666 MULTI CID FTMS 0 0 0 7390 129644.5 0.1506467357750847 -2 0.0694122314453125 5 Carbamidomethyl (C) _LSDITDFC(Carbamidomethyl (C))T_ REV__ENSG00000198796|ENST00000361673|ALPK2 25.399314129420983 0.2080152500878129 5 {[TV]|[{I|L}S]}DPT 5 -1 39.483 0.0 0.0 3.6884 0.0 0.0 0.0 554.1938510561345 554.1938510561345 27.00878537048186 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.7571810378154737 0.0 {[TV]|[{I|L}S]}DPT 3.6884 - 877 1 2.275 125924.3 1.0 3132 4261 7390 SUDHL4_400M_050219_1,7395 SUDHL4_400M_050219_1,7395,LSDITDFCT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7396 39.213 800.0 178280.0 25 0 9731.5 + 7689 EKRAATSVSSR 11 142 596.3236305500391 1190.632708166878 2 596.3256713747978 MULTI CID FTMS 0 0 0 7390 100278.7109375 0.4514028729868701 -2 0.0694122314453125 6 Unmodified _EKRAATSVSSR_ REV__ENST00000374423.7_1_2:207139431-207146526:+|nuORF 10.150570793230772 0.8240029794358671 5 [KA]T{M(Oxidation (M))|F}STNG{I|L}RP 11 -1 + 54.388 0.0 0.0 4.568 4.568 77.869 0.0 0.0 0.0 5.862435673934286 1.5490195998574308 1.5490195998574308 1.5490195998574308 0 0.0 0.0 1.0501648626366045 0.2396518287104437 [KA]T{M(Oxidation (M))|F}STNG{I|L}RP;[KA]T{M(Oxidation (M))|F}STNG{I|L}PR;[KA]T{M(Oxidation (M))|F}STGGG{I|L}RP;[KA]T{M(Oxidation (M))|F}STRRQP;[KA]T{M(Oxidation (M))|F}STGGG{I|L}PR;[KA]T{M(Oxidation (M))|F}STN{[QV]|[N{I|L}]|[RA]|[KV]}VP;[KA]T{M(Oxidation (M))|F}STRR[AG]P;[KA]T{M(Oxidation (M))|F}S[KT][PS]QP;[KA]T{M(Oxidation (M))|F}STRR[PG]A;[KA]T{M(Oxidation (M))|F}STGG{[QV]|[N{I|L}]|[RA]|[KV]}VP 4.568;4.4379;3.8013;3.6815;3.6712;3.0745;2.9117;2.4576;2.3574;2.3078 -;-;-;-;-;-;-;-;-;- 1084 + 1 2.275 106680.1 0.5799999833106995 3133 4261 7390 SUDHL4_400M_050219_1,7396 SUDHL4_400M_050219_1,7396,EKRAATSVSSR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7397 39.217 189.0 329720.0 25 0 43012.0 + 39397 VAKSAGPRAG 10 99 457.2639520411654 912.5133511491308 2 457.2644225955009 MULTI CID FTMS 0 0 0 7390 238518.28125 0.167460558733035 -5 0.1572952270507812 7 Unmodified _VAKSAGPRAG_ REV__ENSG00000110799|ENST00000261405|VWF 6.2057823575117 0.6979311171683138 5 {I|L} 1 -1 9.6777 0.0 0.0 1.0606 0.0 0.0 781.4180885532309 0.0 781.4180885532309 0.0 1.8911131039441909 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0606 - 6 + 1 2.275 51772.1 1.0 3134 4261 7390 SUDHL4_400M_050219_1,7397 SUDHL4_400M_050219_1,7397,VAKSAGPRAG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7398 39.22 205.0 234290.0 25 0 18621.0 + 42803 VVKMPSGEF 9 83 497.25792080126513 992.5012886693304 2 497.2582580447197 MULTI CID FTMS 0 0 0 7390 145934.421875 1.0 0 0.0 8 Unmodified _VVKMPSGEF_ ENSG00000132646|ENST00000379143|PCNA 26.88365393820708 0.1891292719743517 5 VVKM 4 5 38.065 0.0 0.0 3.8352 0.0 0.0 0.0 532.2066422249059 532.2066422249059 22.57999250452839 0.0 0.0 0.0 0 0.6382104921644451 2.0 0.0 0.0 + VVKM 3.8352 + + 110 + 1 2.275 40410.1 1.0 3135 4261 7390 SUDHL4_400M_050219_1,7398 SUDHL4_400M_050219_1,7398,VVKMPSGEF False True VVKMPSGEF 39.220406 497.25825804472 960286.3125 7390.0 ENSG00000132646|ENST00000379143|PCNA;;chr20:5117658-5118610|11|64.09|0.53|6.92|-|0|None,PCNA|1 5.507399717966716 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7399 39.234 800.0 123510.0 25 0 29251.0 + 3175 AVVEPYNSI 9 88 991.510194137642 990.502917671042 1 991.5135375857352 MULTI CID FTMS 0 0 0 7390 131406.609375 0.5535772081104302 3 -0.1947822570800781 9 Unmodified _AVVEPYNSI_ chr2:219252230-219277814|45|11.58|0.35|5.03|-|ENST00000427737|TUBA4A,TUBA4A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C 114.20165948288296 0.0037743244297685 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NS{I|L}EVG{I|L} 9 8 + 70.195 0.0 0.0 7.0868 7.0868 83.773 0.0 0.0 0.0 6.262466747356214 3.962097426172832 3.962097426172832 0.7141104898140895 0 0.2887254899964357 1.3979400086720375 0.555462187404089 0.9392404878284264 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NS{I|L}EVG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NS{I|L}[TP]S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NS{I|L}D{I|L}G{I|L};{NN|[MP]|[D{I|L}]|[EV]}AVPYNS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NS{I|L}[VG]E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGS{I|L}EVG{I|L};{NN|[MP]|[D{I|L}]|[EV]}AVPYGGS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGS{I|L}[TP]S{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGS{I|L}D{I|L}G{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WK]ER{I|L} 7.0868;7.0148;6.4546;6.068;5.7625;5.209;5.1384;5.0809;4.905;4.4499 -;-;-;-;-;-;-;-;-;- 1374 1 2.275 70479.0 0.6299999952316284 3136 4261 7390 SUDHL4_400M_050219_1,7399 SUDHL4_400M_050219_1,7399,AVVEPYNSI True True AVVEPYNSI 39.234254 991.513537585735 2007678.75 7390.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000127824|ENST00000248437|TUBA4A;;ENSG00000152086|ENST00000312988|TUBA3E;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000167553|ENST00000301072|TUBA1C;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;chr2:219252230-219277814|45|11.58|0.35|5.03|-|ENST00000427737|TUBA4A,TUBA4A;;ENSG00000167552|ENST00000301071|TUBA1A;;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;;ENSG00000075886|ENST00000321253|TUBA3D;;ENSG00000198033|ENST00000400113|TUBA3C;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000198033|P0DPH7-2|TUBA3C;;nc|ENSG00000127824|P68366-2|TUBA4A 7.888143380482991 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7400 39.249 800.0 156930.0 25 0 39330.0 -1 0 50 1186.1662316944903 3555.476865683672 3 1186.505419909954 MULTI CID FTMS 0 0 0 7390 104901.4453125 0.1970011871082903 -2 0.0694122314453125 10 5 T 1 -1 6.9897 0.0 0.0 0.19659 0.0 0.0 2350.8264230341783 1100.585841885135 3451.4122649193137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.19659 - 10 + 1 2.275 105620.8 0.5 3137 4261 7390 SUDHL4_400M_050219_1,7400 SUDHL4_400M_050219_1,7400, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7402 39.254 34.0 1860800.0 25 0 600440.0 + 16237 IVNRLLPSA 9 62 491.8058816701979 981.5972104071958 2 491.8060485720634 MULTI CID FTMS 0 0 0 7401 1525966.375 0.5844580616726 1 -0.0731010437011718 1 Unmodified _IVNRLLPSA_ REV__ENSG00000222018|ENST00000410005|C21orf140 32.30548876998284 0.1201446275138228 5 V{I|L} 2 -1 44.776 0.0 0.0 4.5616 0.0 0.0 0.0 766.4254807320666 766.4254807320666 24.53824524003558 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 V{I|L} 4.5616 - 57 + 1 2.275 52406.0 1.0 3138 4262 7401 SUDHL4_400M_050219_1,7402 SUDHL4_400M_050219_1,7402,IVNRLLPSA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7403 39.256 100.0 476250.0 25 0 81148.0 + 20719 LLSDTVQHL 9 84 513.2848780175383 1024.5552031018765 2 513.2852050662041 MULTI CID FTMS 0 0 0 7401 393287.84375 0.3426468270809572 3 -0.19732666015625 2 Unmodified _LLSDTVQHL_ ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF 36.12702656103203 0.0967173616627612 5 {I|L}{I|L}SDTVQH{I|L} 9 0 + 64.612 0.0 0.0 6.3063 6.3063 92.569 0.0 0.0 0.0 39.57467628142653 10.325930211995 10.325930211995 13.455612550363796 0 0.3807196863200844 2.0 0.4247425010840047 0.4247425010840047 + + {I|L}{I|L}SDTVQH{I|L};{I|L}{I|L}SDTV[AG]H{I|L};{I|L}{I|L}{[RE]|[WV]}[MN]H{I|L};{I|L}{I|L}S[KA]YY[PA] 6.3063;4.993;2.6319;1.8962 +;-;-;- + 152 + 1 2.275 39743.2 1.0 3139 4262 7401 SUDHL4_400M_050219_1,7403 SUDHL4_400M_050219_1,7403,LLSDTVQHL True True LLSDTVQHL 39.255746 513.285205066204 5589878.5 7401.0 ENST00000555641.1_1_12:57499966-57502061:-|nuORF;;ENSG00000166888|ENST00000300134|STAT6 7.143758296966553 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7404 39.258 121.0 403970.0 25 0 25333.0 + 30141 QVMEGRVTF 9 83 533.7703626341566 1065.5261723351132 2 533.7714111208916 MULTI CID FTMS 0 0 0 7401 256320.109375 0.5401094423367646 -1 0.0747871398925781 3 Unmodified _QVMEGRVTF_ ENSG00000103365|ENST00000309859|GGA2 21.53697664764585 0.2571576504437394 5 QVMEK{[RE]|[WV]}{M(Oxidation (M))|F} 8 3 + 69.997 0.0 0.0 6.5692 6.5692 95.019 0.0 0.0 0.0 57.52230617350969 4.156687756324686 4.156687756324686 35.53850038390735 0 0.4386218330464625 2.0 0.3494850021680094 0.0 QVMEK{[RE]|[WV]}{M(Oxidation (M))|F};QV{M(Oxidation (M))|F}{[SA]|[TG]}{[RE]|[WV]}{[ET]|[MV]};[AG][{M(Oxidation (M))|F}T]R{[RE]|[WV]}{[ET]|[MV]} 6.5692;3.2339;0.052701 -;-;- 126 + 1 2.275 40387.4 1.0 3140 4262 7401 SUDHL4_400M_050219_1,7404 SUDHL4_400M_050219_1,7404,QVMEGRVTF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7405 39.261 120.0 316030.0 25 0 21975.0 + 23846 LVHGPGEPPSV 11 81 544.7913272062636 1087.5681014793272 2 545.2930786013603 MULTI CID FTMS 0 0 0 7401 238398.875 0.86728088742098 1 -0.0731010437011718 4 Unmodified _LVHGPGEPPSV_ REV__ENST00000341657.8_3_17:4070932-4071073:-|nuORF 10.073929032068715 0.8255972128077141 5 SV 2 -1 13.148 0.0 0.0 1.2089 0.0 0.0 883.4565882730757 0.0 883.4565882730757 0.0 2.0384059143407107 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 SV 1.2089 + + 85 + 1 2.275 34004.8 1.0 3141 4262 7401 SUDHL4_400M_050219_1,7405 SUDHL4_400M_050219_1,7405,LVHGPGEPPSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7406 39.275 800.0 363070.0 25 0 29566.0 -1 0 159 583.6585540515755 1747.9538327549262 3 583.6595336794853 MULTI CID FTMS 0 0 0 7401 180786.25 0.8387808479948581 -2 0.1123275756835937 5 5 [{I|L}V]RP[PS]A{I|L}QS 10 -1 40.684 0.0 0.0 2.3275 0.0 0.0 0.0 696.3254574789204 696.3254574789204 18.330046231471563 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.2302046884880935 0.0 [{I|L}V]RP[PS]A{I|L}QS 2.3275 - 2704 1 2.275 217192.1 0.8100000023841858 3142 4262 7401 SUDHL4_400M_050219_1,7406 SUDHL4_400M_050219_1,7406, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7407 39.277 141.0 381320.0 25 0 36873.0 + 39071 TVVTTGIQAL 10 92 501.79440465994594 1001.574256386692 2 501.7961913943291 MULTI CID FTMS 0 0 0 7401 163833.3125 0.1833777086924402 -2 0.1123275756835937 6 Unmodified _TVVTTGIQAL_ REV__ENSG00000141384|ENST00000269142|TAF4B;REV__nc|ENSG00000141384|Q92750-2|TAF4B 24.020572477871973 0.4289996903560794 5 [VS]{I|L} 3 -1 30.458 0.0 0.0 3.041 0.0 0.0 0.0 699.3693331354124 699.3693331354124 8.99670274726791 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]{I|L} 3.041 - 168 + 1 2.275 45041.3 1.0 3143 4262 7401 SUDHL4_400M_050219_1,7407 SUDHL4_400M_050219_1,7407,TVVTTGIQAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7408 39.291 800.0 345320.0 25 0 56267.0 + 41059 RLSQLEGVNV 10 164 557.8132635597373 1113.6119741862744 2 557.8132202029228 MULTI CID FTMS 0 0 0 7401 117217.09375 1.0 0 0.0 7 Unmodified _VMLVHFRNV_ ENST00000568642.5_1_16:46706372-46712929:-|nuORF;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENST00000569950.1_1_16:46710493-46715410:-|nuORF;ENSG00000069329|ENST00000299138|VPS35 28.486842064014134 0.1687311288560894 5 [{I|L}V][QT]REGVNV 10 7 + 48.694 0.0 0.0 4.3726 4.3726 82.361 0.0 0.0 0.0 7.569619513137056 31.78289149874558 7.569619513137056 6.53212513775344 0 0.4247425010840047 2.0 0.0 0.3054621874040891 [{I|L}V][QT]REGVNV;[{I|L}V][QT]RERNV;[{I|L}V][QT]RWVNV;[KC]VGE{I|L}[RP]NV;[{I|L}V][QT][VG]EGVNV;[{I|L}V][QT]REGVGGV;[KC]VW{I|L}PRNV;[KG][W{I|L}]{I|L}EGVNV;[KC]RE{I|L}[RP]NV;[{I|L}V][QT][VG]WVNV 4.3726;3.7861;3.7861;3.6723;3.5497;3.5497;3.4391;3.1047;3.0858;2.9592 -;-;-;-;-;-;-;-;-;- 4223 1 2.275 213467.8 0.6700000166893005 3144 4262 7401 SUDHL4_400M_050219_1,7408 SUDHL4_400M_050219_1,7408,VMLVHFRNV False False RLSQLEGVNV 39.291246 557.813220202923 536423.125 7401.0 ENST00000568642.5_1_16:46706372-46712929:-|nuORF;;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENST00000569950.1_1_16:46710493-46715410:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35 3.319305896759033 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7409 39.305 800.0 170850.0 25 0 12449.0 -1 HAIPPTLAM 9 174 483.7569884342256 965.4994239352512 2 483.7584106326103 MULTI CID FTMS 0 0 0 7401 91846.2265625 0.9279549548269564 -1 0.0747871398925781 8 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 32.116972079565 0.1225432171549407 5 [HA]{I|L}P[TP]{I|L}A{M(Oxidation (M))|F} 9 -1 [HA]{I|L}P[TP]{I|L} + + 23.711 9.1858 1.2593 2.4559 2.4559 53.335 0.0 0.0 0.0 0.0 8.883037895416654 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [HA]{I|L}P[TP]{I|L}A{M(Oxidation (M))|F} 2.4559 + + 342 + 1 2.275 106102.9 0.5299999713897705 3145 4262 7401 SUDHL4_400M_050219_1,7409 SUDHL4_400M_050219_1,7409,HAIPPTLAM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7410 39.309 181.0 638250.0 25 0 89471.0 40381 VIAGVFWIHRL 11 83 437.5944763682744 1309.7615997050232 3 437.5953246951103 MULTI CID FTMS 0 0 0 7401 183946.703125 0.9674962348265111 -1 0.0747871398925781 9 Unmodified _VIAGVFWIHRL_ ENSG00000198925|ENST00000361242|ATG9A;nc|ENSG00000198925|Q7Z3C6-2|ATG9A;nc|ENSG00000198925|Q7Z3C6-3|ATG9A 13.90604991867851 0.7458848613461305 5 VA{I|L} 3 8 18.416 0.0 0.0 1.4061 0.0 0.0 0.0 1023.550690401621 1023.550690401621 6.19788758288394 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA{I|L} 1.4061 - 53 + 1 2.275 97334.9 1.0 3146 4262 7401 SUDHL4_400M_050219_1,7410 SUDHL4_400M_050219_1,7410,VIAGVFWIHRL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7411 39.322 800.0 298920.0 25 0 15196.0 + -1 NMFCTRLSRCF 11 141 746.3345765145908 1490.6546000959816 2 746.3327514529228 MULTI CID FTMS 0 0 0 7401 139877.546875 0.2241015922739028 -2 0.1123275756835937 10 2 Carbamidomethyl (C) _NMFC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 13.042465956692816 0.7638483625850725 5 [MN]PN{I|L}NADQRDG{M(Oxidation (M))|F} 13 -1 + 103.82 0.0 0.0 6.9649 6.9649 91.262 0.0 0.0 0.0 60.38146471820067 8.707486683671064 8.707486683671064 9.07245946763102 0 0.7614393726401688 1.5228787452803376 0.909097005026964 2.0356668758921828 [MN]PN{I|L}NADQRDG{M(Oxidation (M))|F};[MN]PN{I|L}GGADQRDG{M(Oxidation (M))|F};[MN]PN{I|L}NADQ[VG]DG{M(Oxidation (M))|F};[MN]PGG{I|L}NADQRDG{M(Oxidation (M))|F};[MN]PN{I|L}NAD[AG]RDG{M(Oxidation (M))|F};[MN]PN{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PN{I|L}NWQ[VG]DG{M(Oxidation (M))|F};[MN]PGG{I|L}GGADQRDG{M(Oxidation (M))|F};[MN]PN{I|L}GGAD[AG]RDG{M(Oxidation (M))|F};[MN]PGG{I|L}NADQ[VG]DG{M(Oxidation (M))|F} 6.9649;6.3562;6.3562;6.3562;6.3562;6.1297;5.9501;5.7491;5.7491;5.7491 -;-;-;-;-;-;-;-;-;- 4104 + 1 2.275 167251.5 0.7300000190734863 3147 4262 7401 SUDHL4_400M_050219_1,7411 SUDHL4_400M_050219_1,7411,NMFCTRLSRCF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7413 39.327 1.9 27965000.0 25 0 4118400.0 9414 FKIIYRRYAGL 11 46 467.2768669764855 1398.8087715296565 3 467.2776367068291 MULTI CID FTMS 0 0 0 7412 24307300.0 0.8494348411806744 1 -0.0468940734863281 1 Unmodified _FKIIYRRYAGL_ ENSG00000042753|ENST00000263270|AP2S1 2.9952420565917617 0.861016188266951 5 AVA 3 10 26.682 0.0 0.0 1.9075 0.0 0.0 1139.6581982392977 0.0 1139.6581982392977 0.0 15.713337517843655 0.0 0.0 0 0.5 0.0 0.0 0.0 AVA 1.9075 - 7 1 2.25 50044.4 1.0 3148 4263 7412 SUDHL4_400M_050219_1,7413 SUDHL4_400M_050219_1,7413,FKIIYRRYAGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7414 39.328 54.0 1030200.0 25 0 170990.0 + 12964 HAIPPTLAM 9 80 475.7597802154014 949.5050074976028 2 475.7596923708916 MULTI CID FTMS 0 0 0 7412 946901.0625 0.689366556459023 12 -0.7686729431152344 2 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 5 [{I|L}A]HP[TP]{I|L}AM 9 2 + 37.017 0.0 0.0 3.8986 3.8986 78.916 0.0 0.0 0.0 3.979400086720375 8.908103009885771 3.979400086720375 3.979400086720375 0 0.8935078169319297 1.0 1.0 0.0 [{I|L}A]HP[TP]{I|L}AM;[HA]{I|L}P[TP]{I|L}AM;[YG]{I|L}[TP]P[R{M(Oxidation (M))|F}];[YG]{I|L}[TP][R{I|L}]M;[HT][RH]P[R{M(Oxidation (M))|F}];[HT][RH][R{I|L}]M 3.8986;3.4795;2.6998;2.6998;1.0791;1.0791 -;+;-;-;-;- + 122 1 2.25 49017.1 1.0 3149 4263 7412 SUDHL4_400M_050219_1,7414 SUDHL4_400M_050219_1,7414,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7415 39.329 34.0 1182600.0 25 0 127560.0 + 1881 ALVVQVAEA 9 67 450.262730945333 898.5109089574661 2 450.2632018923759 MULTI CID FTMS 0 0 0 7412 1699862.125 0.3638104888008444 -3 0.1854286193847656 3 Unmodified _ALVVQVAEA_ ENSG00000049860|ENST00000261416|HEXB;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENST00000515528.1_1_5:73981085-73985366:+|nuORF 38.15118350030904 0.0856056900103839 5 [{I|L}A]VVQV 6 3 37.625 0.0 0.0 4.1874 0.0 0.0 0.0 286.1063428776411 286.1063428776411 15.484550065040278 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + [{I|L}A]VVQV 4.1874 + + 174 1 2.25 39553.4 1.0 3150 4263 7412 SUDHL4_400M_050219_1,7415 SUDHL4_400M_050219_1,7415,ALVVQVAEA True True ALVVQVAEA 39.329241 450.263201892376 54512856.0 7412.0 ENST00000513079.5_1_5:73981085-74001232:+|nuORF;;ENSG00000049860|ENST00000261416|HEXB;;ENST00000515528.1_1_5:73981085-73985366:+|nuORF 4.0498576164245605 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7416 39.331 62.0 1343300.0 25 0 105500.0 + 31250 RLTPKLMEV 9 99 543.8196255079409 1085.6246980826818 2 543.8203613162041 MULTI CID FTMS 0 0 0 7412 1144540.375 0.3394887411692846 -2 0.14788818359375 4 Unmodified _RLTPKLMEV_ ENSG00000147677|ENST00000521861|EIF3H 34.221707139014875 0.1071766711162635 5 V{M(Oxidation (M))|F}M{I|L} 4 8 46.183 0.0 0.0 4.2541 0.0 0.0 0.0 592.3591297889438 592.3591297889438 30.966657801178755 0.0 0.0 0.0 0 0.6549471895720984 0.7695510786217261 0.0 0.0 V{M(Oxidation (M))|F}M{I|L} 4.2541 - 124 + 1 2.25 68426.2 1.0 3151 4263 7412 SUDHL4_400M_050219_1,7416 SUDHL4_400M_050219_1,7416,RLTPKLMEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7417 39.332 46.0 925770.0 25 0 112760.0 + 44330 YLPPATQVV 9 70 494.2786641428403 986.5427753524806 2 494.2787048220634 MULTI CID FTMS 0 0 0 7412 675775.25 0.7595984058021821 -1 0.0731010437011718 5 Unmodified _YLPPATQVV_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 21.74664581756881 0.2544899275067181 5 VV 2 7 20.573 0.0 0.0 2.0854 0.0 0.0 770.3943969118541 0.0 770.3943969118541 0.0 11.593793813122062 0.0 0.0 0 0.5 0.0 0.0 0.0 + VV 2.0854 + + 37 + 1 2.25 35684.4 1.0 3152 4263 7412 SUDHL4_400M_050219_1,7417 SUDHL4_400M_050219_1,7417,YLPPATQVV False True YLPPATQVV 39.332008 494.279 9197661.0 7412.0 ENSG00000141543|ENST00000649764|EIF4A3;;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 3.700256029764811 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7418 39.339 395.0 351000.0 25 0 26854.0 + 43619 YAISKPEVL 9 166 510.2940195437305 1018.573486154261 2 510.2922546267509 MULTI CID FTMS 0 0 0 7412 264396.0625 0.8763985912030886 -1 0.0731010437011718 6 Unmodified _YAISKPEVL_ ENSG00000181220|ENST00000458143|ZNF746;nc|ENSG00000181220|Q6NUN9-2|ZNF746;nc|ENSG00000181220|Q6NUN9|ZNF746 41.8396318013385 0.0653578398400075 5 YA{I|L}SK[EP]V{I|L} 9 0 + 72.034 0.0 0.0 7.0721 7.0721 86.576 0.0 0.0 0.0 32.583559388717376 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.3807196863200844 2.0 0.7134679910804405 0.0 + + YA{I|L}SK[EP]V{I|L};YA{I|L}SK[EP]{I|L}V;YA{I|L}SK{[QN]|[E{I|L}]|[KN]}PV;[KS]{I|L}QKS{I|L}C{I|L};{[TV]|[{I|L}S]}KQKS{I|L}C{I|L};[{I|L}A]YSK[EP]V{I|L};[{I|L}A]YSK[EP]{I|L}V;{[QN]|[E{I|L}]|[KN]}[{I|L}T]KS{I|L}C{I|L};[KS]{I|L}[AG]KS{I|L}C{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[KT]KS{I|L}C{I|L} 7.0721;6.7765;6.2226;3.8731;3.6126;3.5909;3.2954;2.9915;2.9691;2.8424 +;-;-;-;-;-;-;-;-;- + 947 + 1 2.25 109669.3 1.0 3153 4263 7412 SUDHL4_400M_050219_1,7418 SUDHL4_400M_050219_1,7418,YAISKPEVL True True YAISKPEVL 39.33907 510.292254626751 1707361.625 7412.0 ENSG00000181220|ENST00000458143|ZNF746;;nc|ENSG00000181220|Q6NUN9-2|ZNF746;;nc|ENSG00000181220|Q6NUN9|ZNF746 5.768883069356282 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7419 39.346 383.0 182450.0 25 0 14943.0 + -1 YMIDPSGVSY 10 112 574.2516609578684 1146.4887689825366 2 574.2512084841728 MULTI CID FTMS 0 0 0 7412 192446.0625 0.9166458031606352 -1 0.0731010437011718 7 Oxidation (M) _YM(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 30.63653989081413 0.2803493085145199 5 [PS]KDQC(Carbamidomethyl (C))YSY 9 -1 [PS]KDQC(Carbamidomethyl (C))Y + + 29.464 13.754 1.5658 2.5699 2.5699 53.52 0.0 0.0 0.0 0.0 8.562675575413575 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 [PS]KDQC(Carbamidomethyl (C))YSY 2.5699 - 889 + 1 2.25 56854.9 1.0 3154 4263 7412 SUDHL4_400M_050219_1,7419 SUDHL4_400M_050219_1,7419,YMIDPSGVSY False False YMIDPSGVSY 39.345958 574.251208484173 1368364.625 7412.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 3.9363457361857095 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7420 39.35 190.0 283420.0 25 0 18087.0 + 1688 ALPENPPAI 9 98 461.2552628877003 920.4959728422008 2 461.2559692263603 MULTI CID FTMS 0 0 0 7412 126174.953125 0.6232164097251185 -1 0.0731010437011718 8 Unmodified _ALPENPPAI_ ENSG00000167863|ENST00000301587|ATP5PD;ENST00000582341.1_1_17:73038242-73038745:-|nuORF;nc|ENSG00000167863|O75947-2|ATP5PD 24.67388899826682 0.2172451872415813 5 [{I|L}A]V 3 7 37.592 0.0 0.0 4.0839 0.0 0.0 0.0 634.2819307916624 634.2819307916624 24.097404794731062 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.0 0.0 [{I|L}A]V 4.0839 - 117 + 1 2.25 48305.5 1.0 3155 4263 7412 SUDHL4_400M_050219_1,7420 SUDHL4_400M_050219_1,7420,ALPENPPAI False True ALPENPPAI 39.349612 461.25596922636 2539578.5 7412.0 ENSG00000167863|ENST00000301587|ATP5PD;;nc|ENSG00000167863|O75947-2|ATP5PD;;ENST00000582341.1_1_17:73038242-73038745:-|nuORF 1.930626432100932 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7421 39.363 800.0 836780.0 25 0 160200.0 1860 ALVHFGKRGLN 11 183 606.353505249056 1210.6924575649118 2 606.3544189333916 MULTI CID FTMS 0 0 0 7412 106621.78125 0.6999062421438947 1 -0.0468940734863281 9 Unmodified _ALVHFGKRGLN_ ENSG00000068615|ENST00000538924|REEP1;nc|ENSG00000068615|Q9H902-2|REEP1;nc|ENSG00000068615|Q9H902-3|REEP1;nc|ENSG00000068615|Q9H902|REEP1 18.1463463914782 0.6576820063886638 5 [{I|L}V]{M(Oxidation (M))|F}RN[RP][SG]{I|L} 10 7 45.083 0.0 0.0 3.7237 0.0 0.0 0.0 68.00931642811489 68.00931642811489 31.58765136272244 0.0 0.0 0.0 0 0.5941876774005248 2.0 0.0 1.089136830878453 [{I|L}V]{M(Oxidation (M))|F}RN[RP][SG]{I|L} 3.7237 - 865 1 2.25 473557.0 0.7900000214576721 3156 4263 7412 SUDHL4_400M_050219_1,7421 SUDHL4_400M_050219_1,7421,ALVHFGKRGLN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7422 39.369 322.0 332620.0 25 0 36847.0 + -1 PCPLRPTV 8 111 470.2585066685338 0 470.2589904665947 PEAK CID FTMS 0 0 0 7412 175822.171875 0.9643173365326936 1 -0.0468940734863281 10 Carbamidomethyl (C) _PC(Carbamidomethyl (C))PLRPTV_ REV__ENST00000496332.5_1_1:155170600-155172038:-|nuORF 12.531546534597751 0.5131024102181418 5 PGP 3 -1 8.9621 0.0 0.0 0.95494 0.0 0.0 469.2471699995461 215.10494409732652 684.3521140968727 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PGP 0.95494 - 71 + 1 2.25 88749.0 1.0 3157 4263 7412 SUDHL4_400M_050219_1,7422 SUDHL4_400M_050219_1,7422,PCPLRPTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7424 39.374 9.0 7995200.0 25 0 3016600.0 -1 LRFVKRHCKR 10 38 700.4116434584598 1398.8087339837195 2 700.4116088747978 MULTI CID FTMS 0 0 0 7423 5846864.5 0.5670886678761994 2 -0.1417579650878906 1 Carbamidomethyl (C) _LRFVKRHC(Carbamidomethyl (C))KR_ ENSG00000183580|ENST00000504595|FBXL7;nc|ENSG00000183580|Q9UJT9-2|FBXL7 1.4819007175156935 0.719781833666733 5 A 1 -1 5.4846 0.0 0.0 0.39209 0.0 0.0 117.04261699345972 1207.678255602596 1324.7208725960556 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.39209 - 1 + 1 2.25 56583.8 1.0 3158 4264 7423 SUDHL4_400M_050219_1,7424 SUDHL4_400M_050219_1,7424,LRFVKRHCKR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7425 39.375 9.5 4409700.0 25 0 457100.0 + 42650 VTVPPGPSL 9 62 433.75257015636254 0 433.7524597048759 PEAK CID FTMS 0 0 0 7423 6101053.0 0.7072061138428511 2 -0.1417579650878906 2 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 64.23631603340823 0.0129441640563295 5 PPGPS 5 4 24.954 0.0 0.0 2.8832 0.0 0.0 299.18421282207845 128.07221399478752 427.256426816866 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.548455006504028 0.0 + PPGPS 2.8832 + + 94 + 1 2.25 36876.3 1.0 3159 4264 7423 SUDHL4_400M_050219_1,7425 SUDHL4_400M_050219_1,7425,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7426 39.377 91.0 590300.0 25 0 101890.0 + 44079 YIVVAFVF 8 74 479.277087279864 956.539621626528 2 479.2770568728447 MULTI CID FTMS 0 0 0 7423 717650.6875 1.0 0 0.0 3 Unmodified _YIVVAFVF_ REV__ENSG00000058262|ENST00000243253|SEC61A1;REV__ENSG00000065665|ENST00000298428|SEC61A2;REV__ENST00000495368.1_1_10:12184516-12209761:+|nuORF;REV__nc|ENSG00000058262|P61619-3|SEC61A1;REV__nc|ENSG00000065665|Q9H9S3-2|SEC61A2;REV__nc|ENSG00000065665|Q9H9S3-3|SEC61A2 2.889219685676258 0.8067950007271085 5 {M(Oxidation (M))|F} 1 -1 10.596 0.0 0.0 1.1077 0.0 0.0 791.4606096409796 0.0 791.4606096409796 0.0 5.647431821795105 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1077 + + 10 + 1 2.25 48682.7 1.0 3160 4264 7423 SUDHL4_400M_050219_1,7426 SUDHL4_400M_050219_1,7426,YIVVAFVF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7427 39.379 91.0 578630.0 25 0 43494.0 + 31304 RLYQGINQL 9 84 552.8114573729682 1103.6083618127363 2 552.8108398318291 MULTI CID FTMS 0 0 0 7423 648403.125 0.256971135769098 2 -0.1417579650878906 4 Unmodified _RLYQGINQL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 52.268347100219714 0.0353964759249114 5 QG{I|L}NQ{I|L} 6 3 56.459 0.0 0.0 5.1158 0.0 0.0 432.2485523908219 0.0 432.2485523908219 0.0 39.25373472475883 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3054621874040891 + QG{I|L}NQ{I|L} 5.1158 + + 130 1 2.25 46180.6 1.0 3161 4264 7423 SUDHL4_400M_050219_1,7427 SUDHL4_400M_050219_1,7427,RLYQGINQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7428 39.381 118.0 615090.0 25 0 85504.0 + -1 PLRMAPLA 8 103 442.7566824567394 883.4988119802788 2 442.7563659548759 MULTI CID FTMS 0 0 0 7423 481819.5625 0.7114389192636176 -1 0.0468940734863281 5 Oxidation (M) _PLRM(Oxidation (M))APLA_ REV__ENST00000483652.5_1_22:50312390-50319315:+|nuORF 2.889219685676258 0.8067950007271085 5 R 1 -1 9.9148 0.0 0.0 1.1222 0.0 0.0 709.3866426460976 0.0 709.3866426460976 0.0 5.9354332167857216 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.1222 + + 12 + 1 2.25 59028.8 1.0 3162 4264 7423 SUDHL4_400M_050219_1,7428 SUDHL4_400M_050219_1,7428,PLRMAPLA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7429 39.385 180.0 529100.0 25 0 37305.0 + 32084 RVLPPSALQSV 11 98 583.8479252155811 1165.681297497962 2 583.8470947146416 MULTI CID FTMS 0 0 0 7423 370590.625 0.9113516144677348 -1 0.0468940734863281 6 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 70.92866715596459 0.0297132693151486 5 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 71.52 0.0 0.0 6.1354 6.1354 89.33 0.0 0.0 0.0 13.080923170097847 46.598204395830265 13.080923170097847 9.128498242811006 0 1.5356668758921828 0.9208187539523752 0.8494850021680094 0.0 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV;[RV]{I|L}P[PS]RRW;[Q{I|L}][VP][RV]{I|L}QDV;[{I|L}A]G[VP][RV]{I|L}QDV 6.1354;5.3523;3.6351;2.8489;2.7344;1.9189;1.6252 +;-;-;-;-;-;- + 192 1 2.25 77737.9 1.0 3163 4264 7423 SUDHL4_400M_050219_1,7429 SUDHL4_400M_050219_1,7429,RVLPPSALQSV True True RVLPPSALQSV 39.384705 583.847094714642 19246566.25 7423.0 nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;nc|ENSG00000178999|Q96GD4-2|AURKB 9.2952880859375 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7430 39.389 246.0 487020.0 25 0 39963.0 + 9755 FMLTQPHSV 9 128 530.2669368258067 0 530.2683593630791 PEAK CID FTMS 0 0 0 7423 204055.859375 0.1593625986603734 -2 0.1199951171875 7 Unmodified _FMLTQPHSV_ nc|ENSG00000211640|P01721|IGLV6-57 65.23502041540118 0.0134875362242201 5 M{I|L}TQP 5 4 35.776 0.0 0.0 3.3798 0.0 0.0 147.06962697016962 338.14743982486567 485.2170667950353 0.0 0.0 0.0 0.0 0 0.75 0.0 0.7302046884880937 0.3807196863200844 + M{I|L}TQP 3.3798 + + 444 + 1 2.25 93287.7 1.0 3164 4264 7423 SUDHL4_400M_050219_1,7430 SUDHL4_400M_050219_1,7430,FMLTQPHSV True True FMLTQPHSV 39.389303 530.268359363079 5964968.0 7423.0 nc|ENSG00000211640|P01721|IGLV6-57 5.922928174336751 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 7431 39.397 428.0 239120.0 25 0 22897.0 + -1 ASGDWFTSR 9 133 513.2345466253503 1024.4545403175005 2 513.7360107302666 MULTI CID FTMS 0 0 0 7423 149325.5625 1.0 0 0.0 8 Carbamidomethyl (C) _LAC(Carbamidomethyl (C))FDDATL_ nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;ENSG00000137713|ENST00000527614|PPP2R1B 13.50788311687929 0.4710407108020397 5 SGDW{M(Oxidation (M))|F}TSR 8 -1 36.412 0.0 0.0 3.5543 0.0 0.0 70.04030799503796 0.0 70.04030799503796 0.0 22.35767918795986 0.0 0.0 0 0.0 0.0 0.6109243748081782 0.0 SGDW{M(Oxidation (M))|F}TSR 3.5543 - 661 + 1 2.25 83807.1 1.0 3165 4264 7423 SUDHL4_400M_050219_1,7431 SUDHL4_400M_050219_1,7431,LACFDDATL False False ASGDWFTSR 39.396945 513.736010730267 1304227.0 7423.0 nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-4|PPP2R1B;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENSG00000137713|ENST00000527614|PPP2R1B 5.217462539672852 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7432 39.4 181.0 301930.0 25 0 41811.0 + 15059 IMDNKLAQI 9 92 523.2892317522054 1044.5639105712107 2 523.2907592654228 MULTI CID FTMS 0 0 0 7423 146215.078125 1.0 0 0.0 9 Unmodified _IMDNKLAQI_ ENSG00000071794|ENST00000310053|HLTF 10.073929032068715 0.563993802247229 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DY 4 6 31.031 0.0 0.0 2.9707 0.0 0.0 0.0 519.3459566705686 519.3459566705686 15.228787452803372 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DY 2.9707 - 83 + 1 2.25 48027.8 1.0 3166 4264 7423 SUDHL4_400M_050219_1,7432 SUDHL4_400M_050219_1,7432,IMDNKLAQI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7433 39.406 292.0 254690.0 25 0 16534.0 18553 LAAAVPTAP 9 115 405.74002769762313 809.4655024620463 2 405.7388793826103 MULTI CID FTMS 0 0 0 7423 96745.4453125 1.0 0 0.0 10 Unmodified _LAAAVPTAP_ ENSG00000050165|ENST00000683431|DKK3;ENST00000526218.5_1_11:12000483-12031257:-|nuORF;ENST00000530694.5_1_11:12023362-12031257:-|nuORF;ENST00000533900.1_1_11:12023572-12030129:-|nuORF;ENST00000534479.5_1_11:12023699-12030797:-|nuORF 26.34127834903884 0.1960301806784604 5 [{I|L}A]VVQ 5 6 35.93 0.0 0.0 4.4387 0.0 0.0 0.0 296.1244129447213 296.1244129447213 20.9471653193118 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 [{I|L}A]VVQ 4.4387 - 327 1 2.25 61019.1 1.0 3167 4264 7423 SUDHL4_400M_050219_1,7433 SUDHL4_400M_050219_1,7433,LAAAVPTAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7434 39.411 305.0 347920.0 25 0 23472.0 + 2061 APLPPHLPGA 10 128 485.2792959137977 968.5440388943954 2 485.2787658572197 MULTI CID FTMS 0 0 0 7423 192571.328125 0.6712070913340049 73 -4.152873992919922 11 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 32.116972079565 0.2470863257317063 5 [PA]{I|L} 3 7 25.942 0.0 0.0 2.6785 0.0 0.0 0.0 684.3468397579297 684.3468397579297 2.870156338638594 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 + [PA]{I|L} 2.6785 + + 687 1 2.25 82663.3 1.0 3168 4264 7423 SUDHL4_400M_050219_1,7434 SUDHL4_400M_050219_1,7434,APLPPHLPGA False True False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 7435 39.419 422.0 267260.0 25 0 27172.0 + -1 VAVMAQIKV 9 140 487.78991121095777 973.5652694887156 2 487.7899352908134 MULTI CID FTMS 0 0 0 7423 167963.171875 0.5817131138075357 -2 0.1199951171875 12 Oxidation (M) _VAVM(Oxidation (M))AQIKV_ REV__ENST00000589793.1_1_17:76539878-76567391:-|nuORF;REV__nc|ENSG00000187775|Q9UFH2-4|DNAH17 13.50788311687929 0.4710407108020397 5 V 1 -1 12.764 0.0 0.0 1.3111 0.0 0.0 856.4856624103937 0.0 856.4856624103937 0.0 2.764209843288903 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3111 + + 183 + 1 2.25 90978.7 1.0 3169 4264 7423 SUDHL4_400M_050219_1,7435 SUDHL4_400M_050219_1,7435,VAVMAQIKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7436 39.433 800.0 213380.0 25 0 78084.0 + 13807 HTGPITCL 8 89 841.4235615422499 840.4162850756499 1 841.4252197146416 MULTI CID FTMS 0 0 0 7423 164082.734375 1.0 0 0.0 13 Unmodified _HTGPITCL_ ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF 64.23631603340823 0.116217441302575 5 [{I|L}P]GTHTC{I|L} 8 4 + 62.962 0.0 0.0 7.4917 7.4917 89.278 0.0 0.0 0.0 13.627815773883327 39.23184401141008 13.627815773883327 4.771212547196626 0 0.3054621874040891 1.6989700043360187 1.1593793813122064 0.0 [{I|L}P]GTHTC{I|L};[{I|L}P]SAHTC{I|L};[{I|L}P]GTHP[YG];[{I|L}P]SAHP[YG];[HT]G[{I|L}P]TC{I|L};[{I|L}P]GTC[HT]{I|L};[{I|L}P]ST{M(Oxidation (M))|F}G[YG];[{I|L}P]SAC[HT]{I|L};[HT]P{[VA]|[{I|L}G]}TC{I|L};[{I|L}P]ST[HA]C{I|L} 7.4917;6.924;6.7557;6.188;4.841;4.3932;4.2952;3.8255;3.6663;3.273 -;-;-;-;+;-;-;-;-;- + 1231 1 2.25 121855.8 0.8899999856948853 3170 4264 7423 SUDHL4_400M_050219_1,7436 SUDHL4_400M_050219_1,7436,HTGPITCL True True HTGPITCL 39.432734 841.425219714642 928525.375 7423.0 ENST00000487402.1_1_3:52291508-52301068:-|nuORF;;ENSG00000164091|ENST00000296490|WDR82 4.190338452657064 1.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7437 39.447 800.0 81527.0 25 0 6920.6 + 15736 IRLENEIQTY 10 100 639.8376198050884 0 639.8381225466728 PEAK CID FTMS 0 0 0 7423 126902.90625 1.0 0 0.0 14 Unmodified _IRLENEIQTY_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 22.65808497894818 0.2768617913208166 5 Q{I|L}DQ 4 8 28.488 0.0 0.0 2.2297 0.0 0.0 282.11986112405765 508.2896212213501 790.4094823454077 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 Q{I|L}DQ 2.2297 - 103 + 1 2.25 56470.8 0.8600000143051147 3171 4264 7423 SUDHL4_400M_050219_1,7437 SUDHL4_400M_050219_1,7437,IRLENEIQTY False True IRLENEIQTY 39.446565 639.838122546673 517162.15625 7423.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 3.4109924286603928 2.0 True 10.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 7439 39.451 30.0 1101700.0 25 0 138490.0 -1 0 39 603.9679561883057 1808.882039165117 3 603.9668456912041 MULTI CID FTMS 0 0 0 7438 1377200.375 0.5367893229156009 1 -0.0644264221191406 1 5 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 6 -1 36.159 0.0 0.0 1.999 0.0 0.0 1095.495409080275 0.0 1095.495409080275 0.0 14.921525057367404 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 1.999 - 24 1 2.228 31382.8 1.0 3172 4265 7438 SUDHL4_400M_050219_1,7439 SUDHL4_400M_050219_1,7439, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7440 39.453 90.0 596640.0 25 0 80442.0 -1 0 50 905.4481875083465 1808.8818220834928 2 905.445849597454 MULTI CID FTMS 0 0 0 7438 415113.3125 0.4144490025550296 2 -0.1680526733398437 2 5 H{I|L} 2 -1 42.959 0.0 0.0 2.3749 0.0 0.0 0.0 1555.7135653233208 1555.7135653233208 28.97940008672037 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 H{I|L} 2.3749 - 13 + 1 2.228 47161.4 1.0 3173 4265 7438 SUDHL4_400M_050219_1,7440 SUDHL4_400M_050219_1,7440, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7441 39.456 134.0 525020.0 25 0 120030.0 + 15819 ISGSLICSTM 10 95 506.2453094394883 1010.4760659457768 2 506.2450744509697 MULTI CID FTMS 0 0 0 7438 457683.0625 0.2098342708676947 -2 0.1242256164550781 3 Unmodified _ISGSLICSTM_ REV__ENSG00000146147|ENST00000502396|MLIP;REV__ENST00000511744.1_1_6:53976250-54068425:+|nuORF 30.63653989081413 0.2803493085145199 5 {I|L}{I|L}G 3 -1 28.952 0.0 0.0 2.8652 0.0 0.0 0.0 724.263241809311 724.263241809311 8.63113446143053 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {I|L}{I|L}G 2.8652 - 129 1 2.228 56312.6 1.0 3174 4265 7438 SUDHL4_400M_050219_1,7441 SUDHL4_400M_050219_1,7441,ISGSLICSTM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7442 39.458 133.0 888080.0 25 0 113750.0 -1 0 86 964.4435795411628 2890.3089092236883 3 964.7781860232352 MULTI CID FTMS 0 0 0 7438 398201.0 0.5286713365629513 -2 0.1242256164550781 4 5 {I|L}[DP]YDP{[QV]|[N{I|L}]|[RA]|[KV]} 8 -1 28.184 0.0 0.0 0.97512 0.0 0.0 1944.844933248882 0.0 1944.844933248882 0.0 8.596981436199012 0.0 0.0 0 0.0 0.0 1.0994850021680094 1.0189301784845295 {I|L}[DP]YDP{[QV]|[N{I|L}]|[RA]|[KV]} 0.97512 - 1115 + 1 2.228 85596.2 1.0 3175 4265 7438 SUDHL4_400M_050219_1,7442 SUDHL4_400M_050219_1,7442, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7443 39.464 286.0 287300.0 25 0 44639.0 + -1 LSDITDFCT 9 118 536.2368977657023 1070.4592425982046 2 536.2375366091728 MULTI CID FTMS 0 0 0 7438 204841.8125 0.2380259124249539 2 -0.1680526733398437 5 Carbamidomethyl (C) _LSDITDFC(Carbamidomethyl (C))T_ REV__ENSG00000198796|ENST00000361673|ALPK2 19.256988751693697 0.3154191944385105 5 {[TV]|[{I|L}S]}DPTV 6 -1 44.064 0.0 0.0 4.1164 0.0 0.0 0.0 455.1281018113484 455.1281018113484 17.593480084245158 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.5387254899964358 0.0 {[TV]|[{I|L}S]}DPTV 4.1164 - 352 1 2.228 67699.2 1.0 3176 4265 7438 SUDHL4_400M_050219_1,7443 SUDHL4_400M_050219_1,7443,LSDITDFCT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7444 39.478 800.0 269610.0 25 0 23655.0 + 29639 QMWISKQEY 9 158 606.7889653680314 0 606.7894164919853 PEAK CID FTMS 0 0 0 7438 151210.15625 1.0 0 0.0 6 Unmodified _QMWISKQEY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000136518|ENST00000429709|ACTL6A;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196604|ENST00000409914|POTEF;ENSG00000196834|ENST00000451531|POTEI;ENSG00000222038|ENST00000409602|POTEJ;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000418351.1_1_15:44281261-44281585:-|nuORF;ENST00000431536.1_1_1:78239597-78239909:-|nuORF;ENST00000461125.1_1_3:179304300-179305795:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000136518|O96019-2|ACTL6A;nc|ENSG00000204434|Q9BYX7|POTEKP 43.77239144664712 0.0487019148086553 5 W{I|L}SK 4 5 25.394 0.0 0.0 2.096 0.0 0.0 259.0988276437128 435.1528719537719 694.2516995974847 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.3054621874040891 + W{I|L}SK 2.096 + + 646 + 1 2.228 158596.2 0.8700000047683716 3177 4265 7438 SUDHL4_400M_050219_1,7444 SUDHL4_400M_050219_1,7444,QMWISKQEY True True QMWISKQEY 39.477561 606.789416491985 1787444.5 7438.0 ENST00000461125.1_1_3:179304300-179305795:+|nuORF;;ENSG00000188219|ENST00000683005|POTEE;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000418351.1_1_15:44281261-44281585:-|nuORF;;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;;nc|ENSG00000136518|O96019-2|ACTL6A;;ENSG00000222038|ENST00000409602|POTEJ;;ENSG00000169067|ENST00000423391|ACTBL2;;ENSG00000077080|ENST00000160382|ACTL6B;;ENST00000431536.1_1_1:78239597-78239909:-|nuORF;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000075624|ENST00000646664|ACTB;;ENSG00000196604|ENST00000409914|POTEF;;ENSG00000136518|ENST00000429709|ACTL6A;;ENSG00000107796|ENST00000224784|ACTA2;;ENSG00000159251|ENST00000290378|ACTC1;;ENSG00000196834|ENST00000451531|POTEI;;ENSG00000184009|ENST00000573283|ACTG1;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF 8.046104431152344 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7445 39.491 800.0 411370.0 25 0 84788.0 + 40422 VIGRPQPQFRL 11 93 655.8879400267618 1309.7613271203236 2 655.8883544802666 MULTI CID FTMS 0 0 0 7438 113077.640625 0.183055485096331 3 -0.2920417785644531 7 Unmodified _VIGRPQPQFRL_ REV__ENSG00000169359|ENST00000643144|SLC33A1;REV__ENST00000460729.1_1_3:155562845-155571132:-|nuORF 9.38312468134398 0.8308777417566128 5 VA 2 -1 28.672 0.0 0.0 2.1891 0.0 0.0 0.0 1136.6369644466793 1136.6369644466793 18.583493856482253 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 VA 2.1891 - 34 + 1 2.228 236903.5 0.800000011920929 3178 4265 7438 SUDHL4_400M_050219_1,7445 SUDHL4_400M_050219_1,7445,VIGRPQPQFRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7446 39.505 800.0 223240.0 25 0 16283.0 + 40601 VLADQEVRL 9 216 521.7980826734167 1041.5816124136334 2 521.7991210818291 MULTI CID FTMS 0 0 0 7438 106994.5390625 1.0 0 0.0 8 Unmodified _VLADQEVRL_ ENSG00000169220|ENST00000408923|RGS14;ENST00000425155.6_1_5:176795054-176799073:+|nuORF;nc|ENSG00000169220|O43566-5|RGS14;nc|ENSG00000169220|O43566-6|RGS14 51.629811660486645 0.0367964933207742 5 V{I|L}ADQEVR{I|L} 9 0 + 84.643 0.0 0.0 8.1264 8.1264 88.86 0.0 0.0 0.0 66.44790169637864 14.973024840566469 14.973024840566469 3.4678748622465605 0 0.7134679910804405 2.0 0.2742275032520141 0.5994850021680094 + + V{I|L}ADQEVR{I|L};V{I|L}WQEVR{I|L};V{I|L}DAQEVR{I|L};V{I|L}ADQERV{I|L};V{I|L}AD[AG]EVR{I|L};V{I|L}WQERV{I|L};V{I|L}DAQERV{I|L};V{I|L}W[AG]EVR{I|L};V{I|L}DA[AG]EVR{I|L};V{I|L}AD[AG]ERV{I|L} 8.1264;7.7934;7.6683;7.5231;7.2423;7.1901;7.065;6.9042;6.7842;6.639 +;-;-;-;-;-;-;-;-;- + 2709 + 1 2.228 141945.8 0.7099999785423279 3179 4265 7438 SUDHL4_400M_050219_1,7446 SUDHL4_400M_050219_1,7446,VLADQEVRL True True VLADQEVRL 39.50523 521.799121081829 512937.96875 7438.0 nc|ENSG00000169220|O43566-6|RGS14;;ENST00000425155.6_1_5:176795054-176799073:+|nuORF;;nc|ENSG00000169220|O43566-5|RGS14;;ENSG00000169220|ENST00000408923|RGS14 5.779017448425293 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7447 39.511 311.0 340010.0 25 0 34227.0 + 37964 TMLGVSHVV 9 115 471.75707828719374 941.4996036411876 2 471.7563354372978 MULTI CID FTMS 0 0 0 7438 217763.953125 0.8796470503510757 -1 0.07733154296875 9 Unmodified _TMLGVSHVV_ ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A 26.88365393820708 0.1891292719743517 5 [MT]{I|L}GVS 6 3 38.351 0.0 0.0 4.0734 0.0 0.0 0.0 350.1830929613254 350.1830929613254 6.066147098514705 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.25 0.0 + [MT]{I|L}GVS 4.0734 + + 393 + 1 2.228 85892.5 1.0 3180 4265 7438 SUDHL4_400M_050219_1,7447 SUDHL4_400M_050219_1,7447,TMLGVSHVV False True TMLGVSHVV 39.510901 471.756335437298 1448218.25 7438.0 ENSG00000136518|ENST00000429709|ACTL6A;;nc|ENSG00000136518|O96019-2|ACTL6A 5.947054545084636 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7449 39.515 44.0 1013100.0 25 0 233880.0 + 40690 VLFPPPML 8 67 457.2639520411654 912.5133511491308 2 457.2636291384697 MULTI CID FTMS 0 0 0 7448 1424325.125 1.0 0 0.0 1 Unmodified _VLFPPPML_ REV__ENSG00000146247|ENST00000275034|PHIP;REV__ENSG00000165288|ENST00000373275|BRWD3;REV__ENSG00000185658|ENST00000342449|BRWD1;REV__nc|ENSG00000165288|Q6RI45-2|BRWD3;REV__nc|ENSG00000165288|Q6RI45-3|BRWD3;REV__nc|ENSG00000165288|Q6RI45-4|BRWD3;REV__nc|ENSG00000165288|Q6RI45-5|BRWD3;REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1;REV__nc|ENSG00000185658|Q9NSI6|BRWD1 2.889219685676258 0.8067950007271085 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.228 37972.5 1.0 3181 4266 7448 SUDHL4_400M_050219_1,7449 SUDHL4_400M_050219_1,7449,VLFPPPML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7450 39.529 800.0 126540.0 25 0 6395.7 + 30142 QVMEGRVTF 9 139 533.7703626341566 1065.5261723351132 2 533.7708007693291 MULTI CID FTMS 0 0 0 7448 58946.63671875 0.1242104459280368 3 -0.3497352600097656 2 Unmodified _QVMEGRVTF_ ENSG00000103365|ENST00000309859|GGA2 26.268140514670165 0.1969607489560049 5 QVMEK{[RE]|[WV]}{M(Oxidation (M))|F} 8 3 + 70.355 0.0 0.0 6.6028 6.6028 87.733 0.0 0.0 0.0 53.21964723176244 5.406075122407685 5.406075122407685 5.0 0 0.2742275032520141 2.0 0.4247425010840047 0.0 QVMEK{[RE]|[WV]}{M(Oxidation (M))|F};QVMERRT{M(Oxidation (M))|F};QVM{[CA]|SS}[YR]PV;QVM{[CA]|SS}[YR]VP;QA{I|L}[R{M(Oxidation (M))|F}]{[RE]|[WV]}{M(Oxidation (M))|F};QA[C(Carbamidomethyl (C))K]K{[RE]|[WV]}{M(Oxidation (M))|F};QA[C(Carbamidomethyl (C))K]RRT{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}MR[HM][HK];[KA][HN][R{M(Oxidation (M))|F}]MY;[H{I|L}]{[CP]|[EA]}K{[CT]|[{M(Oxidation (M))|F}G]}[HK] 6.6028;6.1335;3.3405;3.1471;2.1675;2.1448;1.6755;1.516;0.71256;0.56854 -;-;-;-;-;-;-;-;-;- 381 + 1 2.228 82535.3 0.9100000262260436 3182 4266 7448 SUDHL4_400M_050219_1,7450 SUDHL4_400M_050219_1,7450,QVMEGRVTF False True QVMEGRVTF 39.529186 533.770800769329 4539829.5 7448.0 ENSG00000103365|ENST00000309859|GGA2 5.845691045125325 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7451 39.532 166.0 968900.0 25 0 134380.0 -1 0 130 356.25392680959084 710.4933006859817 2 356.2538635134697 MULTI CID FTMS 0 0 0 7448 283529.09375 1.0 0 0.0 3 5 Y 1 -1 15.485 0.0 0.0 2.1794 0.0 0.0 529.4190647014099 0.0 529.4190647014099 0.0 3.701813447471221 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.1794 - 24 + 1 2.228 130288.9 1.0 3183 4266 7448 SUDHL4_400M_050219_1,7451 SUDHL4_400M_050219_1,7451, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7452 39.536 184.0 335320.0 25 0 46791.0 + 33715 SKSTGKSI 8 118 404.2306173020531 806.4466816709062 2 404.2318908572197 MULTI CID FTMS 0 0 0 7448 287840.34375 0.7951929580863344 -1 0.0644264221191406 4 Unmodified _SKSTGKSI_ REV__ENST00000416249.1_1_10:112629578-112631155:+|nuORF 2.302733041254933 0.8103549651115762 5 P 1 -1 10.089 0.0 0.0 1.251 0.0 0.0 691.3825393752992 0.0 691.3825393752992 0.0 8.305907217233093 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.251 - 10 + 1 2.228 53602.8 1.0 3184 4266 7448 SUDHL4_400M_050219_1,7452 SUDHL4_400M_050219_1,7452,SKSTGKSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7453 39.542 323.0 308640.0 25 0 35386.0 + 31324 RMISEELVAA 10 93 559.7958599175745 1117.5771669019489 2 559.7963134646416 MULTI CID FTMS 0 0 0 7448 242828.84375 0.1859632559424064 -4 0.2617530822753906 5 Unmodified _RMISEELVAA_ ENSG00000161036|ENST00000292616|LRWD1;ENST00000473880.5_1_7:102106264-102108393:+|nuORF 38.61474834105838 0.1721950110283317 5 [{I|L}V]TSSEE{I|L}V 9 6 62.669 0.0 0.0 5.6076 0.0 0.0 0.0 157.0590465691147 157.0590465691147 50.194634427571856 0.0 0.0 0.0 0 1.424742501084005 1.3010299956639813 0.3807196863200844 0.0 [{I|L}V]TSSEE{I|L}V 5.6076 - 383 1 2.228 88112.9 1.0 3185 4266 7448 SUDHL4_400M_050219_1,7453 SUDHL4_400M_050219_1,7453,RMISEELVAA False True RMISEELVAA 39.541869 559.796313464642 11285509.0 7448.0 ENST00000473880.5_1_7:102106264-102108393:+|nuORF;;ENSG00000161036|ENST00000292616|LRWD1 6.572808742523193 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7454 39.556 800.0 234620.0 25 0 10227.0 + + 30743 ALEEQLQQIRAE 12 145 714.3775213889573 1426.7404898447146 2 714.3777953982353 MULTI CID FTMS 0 0 0 7448 177211.265625 1.0 0 0.0 6 Unmodified _RGRYNPLEYFI_ ENSG00000186395|ENST00000269576|KRT10;P13645;P02535-1 29.081581746732265 0.4093582134107448 5 [{I|L}A]EEQ{I|L}QQ{I|L}RAE 12 -1 + 143.95 0.0 0.0 10.089 10.089 94.381 0.0 0.0 0.0 27.44727494896693 16.924260384580805 16.924260384580805 9.098233696509112 0 2.971848749616356 2.0 2.1853167406967966 1.524227503252014 [{I|L}A]EEQ{I|L}QQ{I|L}RAE;[{I|L}A]EEQ{I|L}Q[AG]{I|L}RAE;[{I|L}A]EEQ{I|L}[AG]Q{I|L}RAE;[{I|L}A]EE[AG]{I|L}QQ{I|L}RAE;[{I|L}A]EEQ{I|L}QQ{I|L}{[CP]|[EA]}R;[{I|L}A]EEQ{I|L}QRQ{I|L}AE;[{I|L}A]EEQ{I|L}[AG][AG]{I|L}RAE;[{I|L}A]EE[AG]{I|L}[AG]Q{I|L}RAE;[{I|L}A]EE[AG]{I|L}Q[AG]{I|L}RAE;[{I|L}A]EE[AG]{I|L}QQ{I|L}{[CP]|[EA]}R 10.089;9.4515;9.4515;9.4515;8.903;8.8956;8.8156;8.8156;8.8156;8.2653 -;-;-;-;-;-;-;-;-;- 148082 + 1 2.228 135067.0 0.8700000047683716 3186 4266 7448 SUDHL4_400M_050219_1,7454 SUDHL4_400M_050219_1,7454,RGRYNPLEYFI False False ALEEQLQQIRAE 39.5557 714.377795398235 1042887.25 7448.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 10.081135431925455 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7455 39.57 800.0 59574.0 25 0 4816.8 -1 0 68 979.1201702332372 2934.3386812999115 3 979.7880737185478 MULTI CID FTMS 0 0 0 7448 158402.5625 1.0 0 0.0 7 5 HQS{[QS]|[NT]} 5 -1 8.4029 0.0 0.0 0.28636 0.0 0.0 2349.0785627469804 0.0 2349.0785627469804 0.0 1.4131874559705455 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 HQS{[QS]|[NT]} 0.28636 - 350 + 1 2.228 43765.3 0.7799999713897705 3187 4266 7448 SUDHL4_400M_050219_1,7455 SUDHL4_400M_050219_1,7455, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7456 39.583 800.0 270420.0 25 0 24595.0 + 31239 RLTDYISKV 9 158 547.8135487385808 1093.6125445439616 2 547.8135253787041 MULTI CID FTMS 0 0 0 7448 151521.1875 1.0 0 0.0 8 Unmodified _RLTDYISKV_ ENSG00000144746|ENST00000273258|ARL6IP5 65.47368725323818 0.0230515101691092 5 [KS]V[NG]Y{I|L}SKV 10 5 + 80.225 0.0 0.0 7.3358 7.3358 85.617 0.0 0.0 0.0 0.7918124604762511 65.74417185552797 0.7918124604762511 1.7609125905568137 0 1.8807196863200843 0.0 1.579689690656103 0.6747425010840047 [KS]V[NG]Y{I|L}SKV;[KS][RN]Y{I|L}SKV;[Y{I|L}][RD]T{I|L}SKV;{[TV]|[{I|L}S]}{[RE]|[WV]}Y{I|L}SKV;[{I|L}T][RD]Y{I|L}SKV;[{I|L}P]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y{I|L}SKV;{NN|[MP]|[D{I|L}]|[EV]}[YR]T{I|L}SKV;[Y{I|L}][RN][KS]SKV;[{I|L}T][W{M(Oxidation (M))|F}]T{I|L}SKV;[KG]P[HK][DV]SKV 7.3358;7.1748;6.0491;5.9044;5.8081;5.7577;4.9737;4.4138;4.3664;2.8266 -;-;-;-;-;-;-;-;-;- 1002 1 2.228 167437.6 0.8199999928474426 3188 4266 7448 SUDHL4_400M_050219_1,7456 SUDHL4_400M_050219_1,7456,RLTDYISKV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7457 39.597 800.0 33042.0 25 0 7705.4 -1 0 34 1186.501635730267 0 1186.501635730267 PEAK CID FTMS 0 0 0 -1 0 9 5 G 1 -1 6.9897 0.0 0.0 0.2948 0.0 0.0 963.2614979236216 1347.679551624978 2310.9410495485995 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.2948 - 2 + 1 2.228 29520.6 0.5799999833106995 3189 4266 7448 SUDHL4_400M_050219_1,7457 SUDHL4_400M_050219_1,7457, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7458 39.613 800.0 174710.0 25 0 8705.9 8752 EVRALLLSCV 10 158 551.8174037598687 1101.6202545865374 2 551.8178588747978 MULTI CID FTMS 0 0 0 7448 117294.34375 1.0 0 0.0 10 Unmodified _EVRALLLSCV_ ENST00000366663.9_1_1:230974343-230974889:-|nuORF 13.90604991867851 0.6142120002215601 5 {[TV]|[{I|L}S]}AD{I|L}Q 6 7 40.13 0.0 0.0 3.6428 0.0 0.0 0.0 471.2735498348374 471.2735498348374 15.346379028455884 0.0 0.0 0.0 0 0.0 2.0 1.329689690656103 0.0 {[TV]|[{I|L}S]}AD{I|L}Q 3.6428 - 657 1 2.228 107546.1 0.5899999737739563 3190 4266 7448 SUDHL4_400M_050219_1,7458 SUDHL4_400M_050219_1,7458,EVRALLLSCV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7459 39.614 72.0 1001100.0 25 0 196960.0 + 44155 YLDPRITVA 9 66 524.2955765381524 1046.5766001431048 2 524.2994262576103 MULTI CID FTMS 0 0 0 7448 83730.0 0.06745382261993 -2 0.1417579650878906 11 Unmodified _YLDPRITVA_ ENSG00000198900|ENST00000361337|TOP1 41.8396318013385 0.0653578398400075 5 Y{I|L}D 3 6 52.435 0.0 0.0 5.0101 0.0 0.0 0.0 652.37876052552 652.37876052552 22.847725134586263 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + Y{I|L}D 5.0101 + + 92 + 1 2.228 61835.2 1.0 3191 4266 7448 SUDHL4_400M_050219_1,7459 SUDHL4_400M_050219_1,7459,YLDPRITVA True True YLDPRITVA 39.614248 524.29942625761 7390455.0 7448.0 ENSG00000198900|ENST00000361337|TOP1 1.839533398548762 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7461 39.619 29.0 1054200.0 25 0 110010.0 + 1882 ALVVQVAEA 9 61 450.262730945333 898.5109089574661 2 450.2628356814384 MULTI CID FTMS 0 0 0 7460 1147206.0 0.245529075256772 1 -0.1239891052246093 1 Unmodified _ALVVQVAEA_ ENSG00000049860|ENST00000261416|HEXB;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENST00000515528.1_1_5:73981085-73985366:+|nuORF 32.116972079565 0.1225432171549407 5 [{I|L}A]VVQ 5 4 34.437 0.0 0.0 3.8327 0.0 0.0 0.0 385.17122324873486 385.17122324873486 11.478174818886371 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + [{I|L}A]VVQ 3.8327 + + 125 1 2.224 31012.2 1.0 3192 4267 7460 SUDHL4_400M_050219_1,7461 SUDHL4_400M_050219_1,7461,ALVVQVAEA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7462 39.621 70.0 633730.0 25 0 44224.0 + 31251 RLTPKLMEV 9 80 543.8196255079409 1085.6246980826818 2 543.8201782107353 MULTI CID FTMS 0 0 0 7460 478629.28125 0.1419689997203654 2 -0.2461090087890625 2 Unmodified _RLTPKLMEV_ ENSG00000147677|ENST00000521861|EIF3H 30.7034409873982 0.1405282614900322 5 V{M(Oxidation (M))|F}M{I|L} 4 8 35.037 0.0 0.0 3.2274 0.0 0.0 0.0 592.3592025042283 592.3592025042283 24.44121201300705 0.0 0.0 0.0 0 0.6109243748081782 0.0 0.0 0.0 V{M(Oxidation (M))|F}M{I|L} 3.2274 - 52 + 1 2.224 38071.4 1.0 3193 4267 7460 SUDHL4_400M_050219_1,7462 SUDHL4_400M_050219_1,7462,RLTPKLMEV False True RLTPKLMEV 39.620693 543.820178210735 37107872.0 7460.0 ENSG00000147677|ENST00000521861|EIF3H 6.077236970265706 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7463 39.622 43.0 1726300.0 25 0 334140.0 + 15028 ILTDITKGV 9 76 480.29246381063473 958.5703746880696 2 480.2922241091728 MULTI CID FTMS 0 0 0 7460 1234823.875 0.2089590342109651 -1 0.1036262512207031 3 Unmodified _ILTDITKGV_ ENSG00000167658|ENST00000309311|EEF2 26.268140514670165 0.1969607489560049 5 {I|L}{I|L}TD{I|L}TKGV 9 0 + 55.392 0.0 0.0 5.7786 5.7786 92.793 0.0 0.0 0.0 19.5015747000933 4.89345595715028 4.89345595715028 31.2562484844592 0 0.6989700043360187 2.0 0.0 0.0 + + {I|L}{I|L}TD{I|L}TKGV;{I|L}{I|L}[RP][HQ]PV 5.7786;2.5179 +;- + 195 + 1 2.224 59520.6 1.0 3194 4267 7460 SUDHL4_400M_050219_1,7463 SUDHL4_400M_050219_1,7463,ILTDITKGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7464 39.623 28.0 1944600.0 25 0 218670.0 + 33930 SLGPPFHL 8 92 434.2415237245979 866.4684945159959 2 434.2413818240166 MULTI CID FTMS 0 0 0 7460 1309138.5 0.9949467524201286 1 -0.1239891052246093 4 Unmodified _SLGPPFHL_ REV__ENSG00000005844|ENST00000356798|ITGAL;REV__nc|ENSG00000005844|P20701-2|ITGAL;REV__nc|ENSG00000005844|P20701-3|ITGAL 15.768221252438446 0.6779680726941459 5 {I|L} 1 -1 11.783 0.0 0.0 1.3599 0.0 0.0 735.3735676134553 0.0 735.3735676134553 0.0 6.716479889399221 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.3599 + + 26 + 1 2.224 50748.1 1.0 3195 4267 7460 SUDHL4_400M_050219_1,7464 SUDHL4_400M_050219_1,7464,SLGPPFHL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7465 39.624 51.0 1200200.0 25 0 162930.0 9415 FKIIYRRYAGL 11 57 467.2768669764855 1398.8087715296565 3 467.2777282595634 MULTI CID FTMS 0 0 0 7460 832998.6875 0.0291096957630124 5 -0.3807334899902344 5 Unmodified _FKIIYRRYAGL_ ENSG00000042753|ENST00000263270|AP2S1 2.9952420565917617 0.861016188266951 5 {I|L}AVA 4 9 30.165 0.0 0.0 2.1565 0.0 0.0 1026.5755726554871 0.0 1026.5755726554871 0.0 19.195925227640984 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}AVA 2.1565 - 12 1 2.224 59220.0 1.0 3196 4267 7460 SUDHL4_400M_050219_1,7465 SUDHL4_400M_050219_1,7465,FKIIYRRYAGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7466 39.626 66.0 815350.0 25 0 130050.0 + 12965 HAIPPTLAM 9 68 475.7597802154014 949.5050074976028 2 475.7598144412041 MULTI CID FTMS 0 0 0 7460 749807.4375 0.545877696907473 16 -0.6779823303222656 6 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 5 [{I|L}A]HP[TP]{I|L}AM 9 2 + 38.483 0.0 0.0 4.053 4.053 82.198 0.0 0.0 0.0 7.958800173440753 8.697114610913495 7.958800173440753 7.958800173440753 0 0.8935078169319297 1.0969100130080565 0.9247425010840048 0.0 [{I|L}A]HP[TP]{I|L}AM;[HA]{I|L}P[TP]{I|L}AM;[YG]{I|L}[TP][R{I|L}]M;[YG]{I|L}[TP]P[R{M(Oxidation (M))|F}];[YG]{I|L}[TP]{[WT]|[RM]}{I|L};[HT][RH][R{I|L}]M;[HT][RH]P[R{M(Oxidation (M))|F}] 4.053;3.2148;2.4351;2.4351;0.91098;0.76202;0.76202 -;+;-;-;-;-;- + 132 1 2.224 47610.2 1.0 3197 4267 7460 SUDHL4_400M_050219_1,7466 SUDHL4_400M_050219_1,7466,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7467 39.628 79.0 730490.0 25 0 168730.0 + 22883 SIAPRMMSV 9 77 496.25887245159726 990.5031919699944 2 496.2553893923759 MULTI CID FTMS 0 0 0 7460 504381.53125 0.4120330314485882 -1 0.1036262512207031 7 Unmodified _LSAWESSIV_ ENSG00000047315|ENST00000314595|POLR2B 32.30548876998284 0.1201446275138228 5 {[TV]|[{I|L}S]}AV[EC]A{I|L}SV 10 4 + 46.533 0.0 0.0 4.6979 4.6979 78.388 0.0 0.0 0.0 4.877203139966326 2.4252960407781643 2.4252960407781643 1.6908407815562043 0 1.242992819099939 2.0 0.0 0.0 {[TV]|[{I|L}S]}AV[EC]A{I|L}SV;{[TV]|[{I|L}S]}A[HS][YK]SV;{[TV]|[{I|L}S]}AV[EC]EK{I|L};{[TV]|[{I|L}S]}A[MT][WP]SV;{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}][WP]SV;{[TV]|[{I|L}S]}A{[ES]|[DT]|[{I|L}C]}[MT][RP];{[TV]|[{I|L}S]}{[WT]|[RM]}[MT][RP] 4.6979;4.5272;4.453;3.8949;2.7361;2.6626;2.5133 -;-;-;-;-;-;- 200 + 1 2.224 49525.8 1.0 3198 4267 7460 SUDHL4_400M_050219_1,7467 SUDHL4_400M_050219_1,7467,LSAWESSIV True False SIAPRMMSV 39.627795 496.255389392376 7279664.5 7460.0 ENSG00000047315|ENST00000314595|POLR2B 5.9436295827229815 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7468 39.63 118.0 518540.0 25 0 81482.0 + 40118 VGLGHNAR 8 107 412.23068911483887 822.4468252964778 2 412.2301513552666 MULTI CID FTMS 0 0 0 7460 339294.0 0.7033918838481068 -1 0.1036262512207031 8 Unmodified _VGLGHNAR_ REV__ENST00000533444.1_1_8:145150552-145150603:+|nuORF 0.7936320650641473 0.8195151834710337 5 E 1 -1 4.3361 0.0 0.0 0.52722 0.0 0.0 411.2443239310465 279.1450289361938 690.3893528672403 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 E 0.52722 - 6 + 1 2.224 52272.7 1.0 3199 4267 7460 SUDHL4_400M_050219_1,7468 SUDHL4_400M_050219_1,7468,VGLGHNAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7469 39.634 184.0 452370.0 25 0 35569.0 + 5192 DIRGKLLQV 9 122 521.3241085359348 0 521.3241454958916 PEAK CID FTMS 0 0 0 7460 236700.625 0.7367471411778839 -1 0.1036262512207031 9 Unmodified _DIRGKLLQV_ ENSG00000165521|ENST00000554922|EML5;ENST00000553281.5_1_14:89088194-89171927:-|nuORF;nc|ENSG00000165521|Q05BV3|EML5 31.26834338654808 0.1046433560557175 5 {I|L}{I|L}KT 4 7 25.394 0.0 0.0 2.4402 0.0 0.0 245.13445383518803 337.1589754693969 582.293429304585 0.0 0.0 0.0 0.0 0 0.6549471895720985 0.0 0.3807196863200844 0.0 {I|L}{I|L}KT 2.4402 - 122 + 1 2.224 70627.9 1.0 3200 4267 7460 SUDHL4_400M_050219_1,7469 SUDHL4_400M_050219_1,7469,DIRGKLLQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7470 39.637 163.0 494400.0 25 0 56531.0 + 37790 TLSEVTNQL 9 117 502.76561628069976 1003.5166796281997 2 502.7649413943291 MULTI CID FTMS 0 0 0 7460 204213.546875 0.1374297145292335 -1 0.1036262512207031 10 Unmodified _TLSEVTNQL_ ENSG00000170145|ENST00000304987|SIK2 34.10243960390752 0.1078313939113124 5 [{I|L}T]SEV 5 4 38.413 0.0 0.0 3.8278 0.0 0.0 0.0 471.2194743882183 471.2194743882183 11.487926152138314 0.0 0.0 0.0 0 0.0 2.0 1.0709991640913 0.0 + [{I|L}T]SEV 3.8278 + + 392 1 2.224 67563.8 1.0 3201 4267 7460 SUDHL4_400M_050219_1,7470 SUDHL4_400M_050219_1,7470,TLSEVTNQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7471 39.643 356.0 288420.0 25 0 25031.0 28179 PPVSGTLGL 9 153 420.7436128068287 839.4726726804573 2 420.7433349490166 MULTI CID FTMS 0 0 0 7460 165379.046875 0.8068639542044252 -1 0.1036262512207031 11 Unmodified _PPVSGTLGL_ ENST00000272133.3_1_1:224804098-224804761:+|nuORF 2.059750862983233 0.8427793054688888 5 {I|L} 1 8 7.703 0.0 0.0 0.9176 0.0 0.0 708.3774406021355 0.0 708.3774406021355 0.0 5.228787452803378 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.9176 + + 15 + 1 2.224 82358.3 1.0 3202 4267 7460 SUDHL4_400M_050219_1,7471 SUDHL4_400M_050219_1,7471,PPVSGTLGL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7472 39.648 269.0 291510.0 25 0 30252.0 + 40820 VLMKDVQEI 9 119 537.7977383279541 0 537.7964965701103 PEAK CID FTMS 0 0 0 7460 139272.09375 0.1756305618687406 -1 0.1036262512207031 12 Unmodified _VLMKDVQEI_ ENSG00000139233|ENST00000266604|LLPH 55.50274090549119 0.0215595200729321 5 {I|L}{M(Oxidation (M))|F}{I|L}MQQE 7 5 36.31 0.0 0.0 3.3821 0.0 0.0 99.07245311899564 82.06692682437733 181.1393799433729 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.7302046884880937 1.329689690656103 {I|L}{M(Oxidation (M))|F}{I|L}MQQE 3.3821 - 850 + 1 2.224 65416.6 1.0 3203 4267 7460 SUDHL4_400M_050219_1,7472 SUDHL4_400M_050219_1,7472,VLMKDVQEI True True VLMKDVQEI 39.648395 537.79649657011 3936934.5 7460.0 ENSG00000139233|ENST00000266604|LLPH 5.270757834116618 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7473 39.662 800.0 134800.0 25 0 6313.8 + 24703 MNRENEFYNKF 11 112 746.3345765145908 1490.6546000959816 2 746.3351318240166 MULTI CID FTMS 0 0 0 7460 127625.0546875 0.2044715439217104 3 -0.2839279174804687 13 Unmodified _MNRENEFYNKF_ REV__ENSG00000117477|ENST00000367806|CCDC181;REV__nc|ENSG00000117477|Q5TID7-2|CCDC181;REV__nc|ENSG00000117477|Q5TID7-3|CCDC181 12.240655878213236 0.7805268987462184 5 [MN]PN{I|L}NADQRDG{M(Oxidation (M))|F} 13 -1 + 92.319 0.0 0.0 6.1932 6.1932 89.269 0.0 0.0 0.0 59.48439200809391 8.681185387614107 8.681185387614107 9.072459467631006 0 0.7614393726401688 1.5228787452803376 0.2742275032520141 1.6549471895720984 [MN]PN{I|L}NADQRDG{M(Oxidation (M))|F};[MN]PGG{I|L}NADQRDG{M(Oxidation (M))|F};[MN]PN{I|L}NADQ[VG]DG{M(Oxidation (M))|F};[MN]PN{I|L}GGADQRDG{M(Oxidation (M))|F};[MN]PN{I|L}NAD[AG]RDG{M(Oxidation (M))|F};[MN]PN{I|L}NWQ[VG]DG{M(Oxidation (M))|F};[MN]PN{I|L}NADQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PN{I|L}NWQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CP]|[EA]};[MN]PGG{I|L}NAD[AG]RDG{M(Oxidation (M))|F};[MN]PN{I|L}GGADQ[VG]DG{M(Oxidation (M))|F} 6.1932;5.5846;5.5846;5.5846;5.5846;5.5412;5.3049;5.2632;4.9774;4.9774 -;-;-;-;-;-;-;-;-;- 1567 + 1 2.224 78665.0 0.6399999856948853 3204 4267 7460 SUDHL4_400M_050219_1,7473 SUDHL4_400M_050219_1,7473,MNRENEFYNKF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7474 39.67 429.0 263000.0 25 0 26249.0 + + 42071 RVLDINPQV 9 136 527.3053391147519 1052.5961252963036 2 527.3049194216728 MULTI CID FTMS 0 0 0 7460 127214.46875 1.0 0 0.0 14 Unmodified _VQVRVEPLN_ nc|ENSG00000166004|Q9C0D2-4|CEP295;nc|ENSG00000166004|Q9C0D2-3|CEP295;ENSG00000166004|ENST00000325212|CEP295;nc|ENSG00000166004|Q9C0D2-2|CEP295 27.628801355627647 0.1796483985696185 5 {[TV]|[{I|L}S]}P[VS]{I|L}NPE 9 -1 42.43 0.0 0.0 4.031 0.0 0.0 0.0 113.05569495866612 113.05569495866612 19.86493262131736 0.0 0.0 0.0 0 0.7614393726401688 1.2218487496163564 0.6505149978319906 0.3494850021680094 {[TV]|[{I|L}S]}P[VS]{I|L}NPE 4.031 - 961 1 2.224 93461.9 1.0 3205 4267 7460 SUDHL4_400M_050219_1,7474 SUDHL4_400M_050219_1,7474,VQVRVEPLN False False RVLDINPQV 39.669895 527.304919421673 917102.125 7460.0 nc|ENSG00000166004|Q9C0D2-4|CEP295;;nc|ENSG00000166004|Q9C0D2-3|CEP295;;ENSG00000166004|ENST00000325212|CEP295;;nc|ENSG00000166004|Q9C0D2-2|CEP295 5.37335745493571 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7475 39.681 641.0 211640.0 25 0 13911.0 + 33731 SLADLQNDEV 10 151 552.2643828888529 1102.5142128445057 2 552.2642700076103 MULTI CID FTMS 0 0 0 7460 115927.546875 1.0 0 0.0 15 Unmodified _SLADLQNDEV_ ENSG00000145425|ENST00000274065|RPS3A;ENST00000389400.4_1_10:86320393-86320726:+|nuORF 49.93300154707207 0.0805441195901191 5 {[TV]|[{I|L}S]}AD{I|L}Q 6 4 46.203 0.0 0.0 4.1907 0.0 0.0 0.0 472.1636018428057 472.1636018428057 28.3415720112318 0.0 0.0 0.0 0 0.0 2.0 1.4291746928241125 0.0 + {[TV]|[{I|L}S]}AD{I|L}Q 4.1907 + + 772 1 2.224 105172.5 1.0 3206 4267 7460 SUDHL4_400M_050219_1,7475 SUDHL4_400M_050219_1,7475,SLADLQNDEV True True SLADLQNDEV 39.681081 552.26427000761 2831973.75 7460.0 ENSG00000145425|ENST00000274065|RPS3A;;ENST00000389400.4_1_10:86320393-86320726:+|nuORF 4.2543559074401855 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7476 39.695 800.0 352090.0 25 0 31559.0 + 1887 ALWEDEGVRA 10 169 573.2830919771595 1144.551631021119 2 573.2833129763603 MULTI CID FTMS 0 0 0 7460 103094.9453125 0.2424905608758548 -1 0.1036262512207031 16 Unmodified _ALWEDEGVRA_ ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000494081.5_1_20:57478601-57480533:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS 72.96794272382148 0.0188410189619069 5 [{I|L}A]WEDEGARV 10 2 + 75.52 0.0 0.0 6.5983 6.5983 83.729 0.0 0.0 0.0 45.7221929473392 0.5225622685225773 0.5225622685225773 1.6296846393490512 0 1.385151878060192 1.6989700043360187 1.274227503252014 0.75 [{I|L}A]WEDEGARV;[{I|L}A]WEDE[RN]{I|L};[{I|L}A]WEDEG{[NV]|[RG]}{I|L};[{I|L}A]WEDADARV;[{I|L}A]WEDAD{[NV]|[RG]}{I|L};[{I|L}A]WEDA{[MG]|[TS]}[RP];[{I|L}A]WED{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RP];[{I|L}A]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ADEP[RV];[{I|L}A]WEADDARV;[{I|L}A]WEADD{[NV]|[RG]}{I|L} 6.5983;6.4559;6.4159;6.3202;6.1378;6.0114;5.3477;5.3288;5.0754;4.893 -;-;-;-;-;-;-;-;-;- 3394 + 1 2.224 210699.2 0.5600000023841858 3207 4267 7460 SUDHL4_400M_050219_1,7476 SUDHL4_400M_050219_1,7476,ALWEDEGVRA True True ALWEDEGVRA 39.694912 573.28331297636 2330923.0 7460.0 ENST00000494081.5_1_20:57478601-57480533:+|nuORF;;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;;nc|ENSG00000087460|Q5JWF2-2|GNAS;;nc|ENSG00000087460|Q5JWF2|GNAS;;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;;nc|ENSG00000087460|P63092-3|GNAS;;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;;nc|ENSG00000087460|P63092-2|GNAS;;nc|ENSG00000087460|P63092-4|GNAS;;ENSG00000087460|ENST00000371085|GNAS 7.758903503417969 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7477 39.71 800.0 82129.0 25 0 20087.0 -1 0 42 1197.115923398603 3588.325940796009 3 1197.449755847454 MULTI CID FTMS 0 0 0 7460 171428.109375 1.0 0 0.0 17 5 R[MN]ST 5 -1 7.6195 0.0 0.0 0.21234 0.0 0.0 2350.8290048381486 645.2137545221311 2996.04275936028 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 R[MN]ST 0.21234 - 46 + 1 2.224 62738.6 0.5899999737739563 3208 4267 7460 SUDHL4_400M_050219_1,7477 SUDHL4_400M_050219_1,7477, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7478 39.724 800.0 107020.0 25 0 6464.3 -1 0 99 910.4296131987128 1818.8446734642253 2 910.9257079958916 MULTI CID FTMS 0 0 0 7460 132731.375 0.7221611221659848 -5 0.3653793334960937 18 5 [MN][NP]{I|L}NAD[HD]KMN{I|L} 14 -1 63.254 0.0 0.0 3.4777 0.0 0.0 0.0 208.07325159244377 208.07325159244377 43.58812600670348 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.4247425010840047 [MN][NP]{I|L}NAD[HD]KMN{I|L} 3.4777 - 899 + 1 2.224 63439.2 0.6600000262260437 3209 4267 7460 SUDHL4_400M_050219_1,7478 SUDHL4_400M_050219_1,7478, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7479 39.729 175.0 265650.0 25 0 18336.0 19455 LFERAHYR 8 88 546.2898020224038 1090.5650511116075 2 546.2900268435478 MULTI CID FTMS 0 0 0 7460 120233.40625 1.0 0 0.0 19 Unmodified _LFERAHYR_ ENSG00000167077|ENST00000401548|MEI1;nc|ENSG00000167077|Q5TIA1-4|MEI1;nc|ENSG00000167077|Q5TIA1-6|MEI1 16.942295170755138 0.6606234159769251 5 {I|L}M[MT] 4 7 16.198 0.0 0.0 1.4853 0.0 0.0 596.341112205275 0.0 596.341112205275 0.0 2.703037561203842 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}M[MT] 1.4853 - 58 1 2.224 40695.6 1.0 3210 4267 7460 SUDHL4_400M_050219_1,7479 SUDHL4_400M_050219_1,7479,LFERAHYR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7480 39.738 546.0 182960.0 25 0 18870.0 23173 LSRCWGQAL 9 127 517.265644156467 1032.516735379734 2 517.2657348513603 MULTI CID FTMS 0 0 0 7460 119259.0546875 1.0 0 0.0 20 Unmodified _LSRCWGQAL_ ENST00000490848.5_1_15:42132349-42134687:+|nuORF 26.88365393820708 0.1891292719743517 5 {[QN]|[E{I|L}]|[KN]}QQ{M(Oxidation (M))|F}QGA{I|L} 9 6 + 38.444 0.0 0.0 3.7233 3.7233 78.027 0.0 0.0 0.0 3.5095628692308622 8.969975784476162 3.5095628692308622 3.5095628692308622 0 0.4876954943324545 1.0969100130080565 0.5 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}QQ{M(Oxidation (M))|F}QGA{I|L};{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))R]EQGA{I|L};{[QN]|[E{I|L}]|[KN]}QQ{M(Oxidation (M))|F}[AG]GA{I|L};{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))R]E[AG]GA{I|L};{[VA]|[{I|L}G]}G[WM]TQGA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[WM]TQGA{I|L};{[VA]|[{I|L}G]}G[RD]{M(Oxidation (M))|F}QGA{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QE[WQ]A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[RD]{M(Oxidation (M))|F}QGA{I|L};[{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}QGA{I|L} 3.7233;3.3834;2.8315;2.4916;2.2526;2.1844;2.1316;2.0718;2.0634;1.9666 -;-;-;-;-;-;-;-;-;- 414 1 2.224 77331.4 1.0 3211 4267 7460 SUDHL4_400M_050219_1,7480 SUDHL4_400M_050219_1,7480,LSRCWGQAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7482 39.743 64.0 656690.0 25 0 144720.0 + 25694 NIATFMDTV 9 71 506.2453094394883 1010.4760659457768 2 506.2459594607353 MULTI CID FTMS 0 0 0 7481 609246.125 0.2793214931748614 1 -0.1221199035644531 1 Unmodified _NIATFMDTV_ ENSG00000164659|ENST00000450689|ELAPOR2 12.531546534597751 0.4974689918368763 5 {I|L}{I|L}G 3 8 23.222 0.0 0.0 2.2981 0.0 0.0 0.0 724.2627840456391 724.2627840456391 9.154193123236674 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}G 2.2981 - 72 1 2.224 38333.9 1.0 3212 4268 7481 SUDHL4_400M_050219_1,7482 SUDHL4_400M_050219_1,7482,NIATFMDTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7483 39.745 66.0 936870.0 25 0 90950.0 18592 LADLSVLPG 9 95 442.7566824567394 883.4988119802788 2 442.7565795779228 MULTI CID FTMS 0 0 0 7481 523450.0 0.772909054078809 3 -0.2112159729003906 2 Unmodified _LADLSVLPG_ ENST00000263274.11_1_19:48668833-48673585:-|nuORF 8.593279151180031 0.6146971463335029 5 [WK]{I|L}V 4 7 6.0308 0.0 0.0 0.6826 0.0 0.0 0.0 354.1429537408813 354.1429537408813 0.3444064470390673 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [WK]{I|L}V 0.6826 - 114 + 1 2.224 53034.5 1.0 3213 4268 7481 SUDHL4_400M_050219_1,7483 SUDHL4_400M_050219_1,7483,LADLSVLPG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7484 39.746 73.0 883670.0 25 0 104370.0 + 1968 AMWEHPITA 9 100 528.2545701673204 1054.4945874014406 2 528.2525512576103 MULTI CID FTMS 0 0 0 7481 696365.8125 0.3617302465797827 -1 0.1239891052246093 3 Unmodified _AMWEHPITA_ ENSG00000138621|ENST00000342932|PPCDC;nc|ENSG00000138621|Q96CD2-2|PPCDC 48.345845343767074 0.0439967357579942 5 {[DS]|[MA]|[CV]|TT}WEH[{I|L}P]TA 9 0 + 56.908 0.0 0.0 5.3967 5.3967 88.367 0.0 0.0 0.0 21.836068845642195 12.587418566968154 12.587418566968154 9.208187539523747 0 0.7742275032520141 1.6989700043360187 1.0114393726401687 0.0 + + {[DS]|[MA]|[CV]|TT}WEH[{I|L}P]TA;{[DS]|[MA]|[CV]|TT}{[DA]|[EG]}EH[{I|L}P]TA;[{I|L}P]TAH{M(Oxidation (M))|F}W[PS];[YQ]T{[{M(Oxidation (M))|F}D]|MM}[{I|L}P]TA;{[YC]|[HE]}W[{I|L}P]T{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]T[{I|L}P]{[{M(Oxidation (M))|F}D]|MM}TA;[{I|L}P]T[EP]EW[PS];[{I|L}P]TAH{M(Oxidation (M))|F}{[DA]|[EG]}[PS];{[DS]|[MA]|[CV]|TT}W{M(Oxidation (M))|F}H[{I|L}P][PG];{[YC]|[HE]}W{[DS]|[MA]|[CV]|TT}VV[PS] 5.3967;4.5235;2.9628;2.7465;2.6288;2.415;2.3968;2.0896;1.9977;1.8678 +;-;-;-;-;-;-;-;-;- + 186 + 1 2.224 56837.3 1.0 3214 4268 7481 SUDHL4_400M_050219_1,7484 SUDHL4_400M_050219_1,7484,AMWEHPITA True True AMWEHPITA 39.746247 528.25255125761 9675540.0 7481.0 nc|ENSG00000138621|Q96CD2-2|PPCDC;;ENSG00000138621|ENST00000342932|PPCDC 8.96675697962443 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7485 39.748 60.0 661480.0 25 0 79983.0 -1 0 48 603.9679561883057 1808.882039165117 3 603.9676391482353 MULTI CID FTMS 0 0 0 7481 642560.0625 0.2504496710451311 4 -0.256744384765625 4 5 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 6 -1 34.654 0.0 0.0 1.9157 0.0 0.0 1095.5018788068376 0.0 1095.5018788068376 0.0 13.416375079047498 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H{I|L}Q 1.9157 - 51 1 2.224 39633.2 1.0 3215 4268 7481 SUDHL4_400M_050219_1,7485 SUDHL4_400M_050219_1,7485, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7486 39.751 138.0 566790.0 25 0 56517.0 -1 0 75 964.4435795411628 2890.3089092236883 3 964.7796508669852 MULTI CID FTMS 0 0 0 7481 514851.75 0.68354264003424 1 -0.1221199035644531 5 5 HH{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]GD 8 -1 16.828 0.0 0.0 0.58221 0.0 0.0 1592.7170645965382 339.1678974968233 1931.8849620933613 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 HH{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[HQ]GD 0.58221 - 443 + 1 2.224 60795.8 1.0 3216 4268 7481 SUDHL4_400M_050219_1,7486 SUDHL4_400M_050219_1,7486, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7487 39.753 122.0 447350.0 25 0 48612.0 + 20593 LLPDNVHYV 9 79 535.2874574127852 1068.5603618923703 2 535.2880126833916 MULTI CID FTMS 0 0 0 7481 267546.28125 0.217354440620864 -1 0.1239891052246093 6 Unmodified _LLPDNVHYV_ ENSG00000039123|ENST00000230640|MTREX 20.453626601364224 0.2830276176381075 5 {I|L}{I|L}PD{[NV]|[RG]}HVY 9 2 + 50.569 0.0 0.0 4.7324 4.7324 89.264 0.0 0.0 0.0 19.634155135475737 11.706962271689749 11.706962271689749 24.490925311194182 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}PD{[NV]|[RG]}HVY;{I|L}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][{I|L}A]AVY;{I|L}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L};{I|L}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F} 4.7324;2.4405;1.7453;1.5436 -;-;-;- 104 + 1 2.224 47863.7 1.0 3217 4268 7481 SUDHL4_400M_050219_1,7487 SUDHL4_400M_050219_1,7487,LLPDNVHYV False True LLPDNVHYV 39.753082 535.288012683392 13906436.0 7481.0 ENSG00000039123|ENST00000230640|MTREX 5.830983479817708 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7488 39.756 135.0 330730.0 25 0 21737.0 + -1 NMWPWHKVNMF 11 57 753.3458709096609 1504.6771888861217 2 753.3421508669853 MULTI CID FTMS 0 0 0 7481 234211.875 0.9301782960259246 -2 0.2276153564453125 7 Oxidation (M) _NMWPWHKVNM(Oxidation (M))F_ REV__ENSG00000006788|ENST00000252172|MYH13 9.38312468134398 0.8308777417566128 5 [MN]PN{I|L}NE[QA]R[DG]{M(Oxidation (M))|F} 13 -1 + 57.287 0.0 0.0 3.8073 3.8073 86.642 0.0 0.0 0.0 38.59044813309875 0.2872415126189409 0.2872415126189409 23.747398018363945 0 0.3807196863200844 1.6989700043360187 0.0 0.3807196863200844 [MN]PN{I|L}NE[QA]R[DG]{M(Oxidation (M))|F};[MN]NY[W{I|L}]N{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.8073;2.229 -;- 126 + 1 2.224 37415.1 1.0 3218 4268 7481 SUDHL4_400M_050219_1,7488 SUDHL4_400M_050219_1,7488,NMWPWHKVNMF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7489 39.77 800.0 208730.0 25 0 25685.0 -1 0 108 905.4481875083465 1808.8818220834928 2 905.9481689333916 MULTI CID FTMS 0 0 0 7481 218800.828125 0.232133148890028 5 -0.2607612609863281 8 5 [H{I|L}][WH]RMMED{I|L}N{I|L}SK 14 -1 + 59.593 0.0 0.0 3.2945 3.2945 78.291 0.0 0.0 0.0 4.758950235313861 3.6535656654828585 3.6535656654828585 4.758950235313861 0 1.024227503252014 1.6989700043360187 0.0 0.0 [H{I|L}][WH]RMMED{I|L}N{I|L}SK;[NP]{I|L}H{I|L}C(Carbamidomethyl (C))QEED{I|L}N{I|L}SK;[H{I|L}][WH]RMMGNH{I|L}[H{I|L}]Q;[H{I|L}][WH]RMMED{I|L}[WK]Q;[H{I|L}][WH]RMMED{I|L}[WQ]K;[H{I|L}][WH]RMMGNHY{I|L}SK;[H{I|L}][WH]RMMGNWN{I|L}SK;[NP]{I|L}H{I|L}C(Carbamidomethyl (C))QEGNH{I|L}[H{I|L}]Q;[NP]{I|L}H{I|L}C(Carbamidomethyl (C))QEED{I|L}[WK]K;[NP]{I|L}H{I|L}C(Carbamidomethyl (C))QEGNHY{I|L}SK 3.2945;3.0314;3.0047;2.9713;2.9713;2.9592;2.7928;2.7416;2.707;2.6961 -;-;-;-;-;-;-;-;-;- 8124 1 2.224 115177.1 0.8100000023841858 3219 4268 7481 SUDHL4_400M_050219_1,7489 SUDHL4_400M_050219_1,7489, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7490 39.784 800.0 191080.0 25 0 14485.0 + 32085 RVLPPSALQSV 11 133 583.8479252155811 1165.681297497962 2 583.8481933474541 MULTI CID FTMS 0 0 0 7481 185442.359375 0.4560374229842218 3 -0.2112159729003906 9 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 83.27773906761396 0.0052189922445383 5 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 73.782 0.0 0.0 6.3295 6.3295 89.652 0.0 0.0 0.0 6.531451274376849 47.63590287043564 6.531451274376849 9.128498242810991 0 1.8556270500406933 0.0 1.274227503252014 0.3054621874040891 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[VP][R{I|L}][PS]A{I|L}QSV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[VP][WK][{I|L}P]{I|L}QSV;[RV]{I|L}PKK[HC]SV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV;[RV]{I|L}P[PS]RRW;[RV]{I|L}PKK[DP]DV;[AG]{I|L}[VP][RV]{I|L}QDV 6.3295;5.5464;4.6344;3.3089;3.0365;2.8209;2.5227;2.2753;2.1337;2.0485 +;-;-;-;-;-;-;-;-;- + 702 1 2.224 119341.2 0.7599999904632568 3220 4268 7481 SUDHL4_400M_050219_1,7490 SUDHL4_400M_050219_1,7490,RVLPPSALQSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7491 39.788 224.0 251780.0 25 0 22740.0 11854 GLSKTAKRN 9 98 487.78991121095777 973.5652694887156 2 487.7904540896416 MULTI CID FTMS 0 0 0 7481 147940.890625 0.5123692008446646 2 -0.1599388122558593 10 Unmodified _GLSKTAKRN_ ENSG00000170473|ENST00000408946|PYM1;nc|ENSG00000170473|Q9BRP8-2|PYM1 11.640296217721598 0.521594087909532 5 V 1 9 12.218 0.0 0.0 1.255 0.0 0.0 856.4857844807062 0.0 856.4857844807062 0.0 1.6225554575675185 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.255 - 29 + 1 2.224 47212.6 1.0 3221 4268 7481 SUDHL4_400M_050219_1,7491 SUDHL4_400M_050219_1,7491,GLSKTAKRN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7492 39.792 237.0 328030.0 25 0 35771.0 + 44369 YLSPDLSKV 9 100 511.2829385753273 1020.5513242174546 2 511.2833129763603 MULTI CID FTMS 0 0 0 7481 127042.6875 0.2569422841395622 -2 0.2276153564453125 11 Unmodified _YLSPDLSKV_ ENSG00000157764|ENST00000646891|BRAF;ENST00000445336.2_1_X:74804463-74804925:+|nuORF;ENST00000479537.5_1_7:140434399-140447180:-|nuORF;ENST00000497784.1_2_7:140434399-140508041:-|nuORF 36.506200033944 0.094635877243972 5 [Y{I|L}]SPD{I|L}SKV 9 0 + 62.74 0.0 0.0 6.1476 6.1476 93.699 0.0 0.0 0.0 26.41459935473506 8.979178519207345 8.979178519207345 28.19191001411229 0 0.7302046884880937 2.0 0.4247425010840047 0.0 + + [Y{I|L}]SPD{I|L}SKV;[DP]S{I|L}SKV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}PSSKV{I|L}Y;[PS]D{I|L}SKV{I|L}Y;[DP]S{I|L}KSV{I|L}Y;{NN|[MP]|[D{I|L}]|[EV]}PSKSV{I|L}Y;[DP]{I|L}SSKV{I|L}Y;[PS]D{I|L}KSV{I|L}Y;{[TV]|[{I|L}S]}[DP]SKV{I|L}Y;[DP]{I|L}SKSV{I|L}Y 6.1476;3.3852;3.3672;3.0695;3.0389;3.0209;2.9116;2.7232;2.6823;2.5653 +;-;-;-;-;-;-;-;-;- + 428 + 1 2.224 63816.6 1.0 3222 4268 7481 SUDHL4_400M_050219_1,7492 SUDHL4_400M_050219_1,7492,YLSPDLSKV True True YLSPDLSKV 39.792188 511.28331297636 4818292.5 7481.0 ENST00000479537.5_1_7:140434399-140447180:-|nuORF;;ENSG00000157764|ENST00000646891|BRAF;;ENST00000497784.1_2_7:140434399-140508041:-|nuORF;;ENST00000445336.2_1_X:74804463-74804925:+|nuORF 6.5231032371521 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7493 39.797 285.0 243260.0 25 0 54840.0 -1 KLSVYMTLY 9 96 567.2977711438485 0 567.2936889529228 PEAK CID FTMS 0 0 0 7481 131152.484375 1.0 0 0.0 12 Oxidation (M) _KLSVYM(Oxidation (M))TLY_ ENSG00000167619|ENST00000301204|TMEM145 6.723162845929126 0.3444685223463734 5 {I|L}WDH 4 -1 15.662 0.0 0.0 1.3828 0.0 0.0 128.10718904859442 450.20029627017817 578.3074853187726 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}WDH 1.3828 - 32 + 1 2.224 62398.6 1.0 3223 4268 7481 SUDHL4_400M_050219_1,7493 SUDHL4_400M_050219_1,7493,KLSVYMTLY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7494 39.812 800.0 212450.0 25 0 48161.0 5267 DKRDARRELKL 11 113 700.4116434584598 1398.8087339837195 2 700.4127685427666 MULTI CID FTMS 0 0 0 7481 109621.7734375 0.0106322398045821 6 -0.3073387145996094 13 Unmodified _DKRDARRELKL_ ENSG00000088256|ENST00000078429|GNA11;ENSG00000156052|ENST00000286548|GNAQ;ENST00000586763.1_1_19:3094649-3114956:+|nuORF 8.155526934196011 0.8366696279279818 5 {[QV]|[N{I|L}]|[RA]|[KV]}TAWD 6 9 30.997 0.0 0.0 2.2159 0.0 0.0 0.0 695.4463827224401 695.4463827224401 4.705452212310355 0.0 0.0 0.0 0 0.0 0.9208187539523752 1.1861818737241734 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}TAWD 2.2159 - 1306 1 2.224 121029.6 0.6200000047683716 3224 4268 7481 SUDHL4_400M_050219_1,7494 SUDHL4_400M_050219_1,7494,DKRDARRELKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7495 39.818 290.0 224910.0 25 0 18632.0 + 2062 APLPPHLPGA 10 105 485.2792959137977 968.5440388943954 2 485.2790710330009 MULTI CID FTMS 0 0 0 7481 97896.3515625 0.3412175946661415 77 -3.895591735839844 14 Unmodified _APLPPHLPGA_ LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|59|2|anti-sense 32.116972079565 0.2470863257317063 5 [PA]{I|L}Y{I|L} 5 6 28.468 0.0 0.0 2.9392 0.0 0.0 0.0 408.1879957637892 408.1879957637892 8.177418734074564 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [PA]{I|L}Y{I|L} 2.9392 - 344 1 2.224 53883.4 1.0 3225 4268 7481 SUDHL4_400M_050219_1,7495 SUDHL4_400M_050219_1,7495,APLPPHLPGA False True False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 7496 39.832 800.0 226390.0 25 0 9214.3 -1 0 165 946.4338897315608 1890.853226529921 2 946.4388915896416 MULTI CID FTMS 0 0 0 7481 85467.4609375 0.146027222768075 -3 0.2920417785644531 15 5 [MN]PN{I|L}NEE[HD]KMN{I|L} 14 -1 94.95 0.0 0.0 5.0215 0.0 0.0 0.0 208.07308374576408 208.07308374576408 29.96894731630779 0.0 0.0 0.0 0 0.5387254899964358 2.0 0.6109243748081782 1.305462187404089 [MN]PN{I|L}NEE[HD]KMN{I|L} 5.0215 - 103893 + 1 2.224 117643.2 0.550000011920929 3226 4268 7481 SUDHL4_400M_050219_1,7496 SUDHL4_400M_050219_1,7496, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7497 39.837 317.0 157510.0 25 0 14921.0 + 13368 HLHCPPLSL 9 95 508.7725222457834 1015.5304915583667 2 508.7729980349541 MULTI CID FTMS 0 0 0 7481 86677.921875 0.4522681290857826 9 -0.378448486328125 16 Unmodified _HLHCPPLSL_ REV__ENST00000362021.8_1_11:47437008-47437206:+|nuORF 19.438996006549623 0.310492472477042 5 S{I|L} 2 -1 17.664 0.0 0.0 1.7394 0.0 0.0 797.4035669751622 0.0 797.4035669751622 0.0 6.554556341805768 0.0 0.0 0 0.4247425010840047 0.0 0.2614393726401688 0.0 S{I|L} 1.7394 + + 45 + 1 2.224 45972.8 1.0 3227 4268 7481 SUDHL4_400M_050219_1,7497 SUDHL4_400M_050219_1,7497,HLHCPPLSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7498 39.852 800.0 82444.0 25 0 6048.4 + 13450 HLRDYFEQY 9 104 635.7965046691357 0 635.7965576052666 PEAK CID FTMS 0 0 0 7481 81378.9765625 1.0 0 0.0 17 Unmodified _HLRDYFEQY_ chr12:54282662-54282800|48|694.65|0.0|26.05|+|ENST00000677249|HNRNPA1,HNRNPA1;chr12:54283967-54284240|48|13.83|0.0|20.4|+|ENST00000677375|HNRNPA1,HNRNPA1;ENSG00000135486|ENST00000340913|HNRNPA1;ENSG00000139675|ENST00000357495|HNRNPA1L2;ENSG00000224578|ENST00000565308|HNRNPA1L3;ENST00000426371.2_1_11:74065594-74065891:+|nuORF;ENST00000510646.1_1_5:135764749-135765112:+|nuORF;ENST00000521638.1_1_5:153717591-153717873:-|nuORF;nc|ENSG00000135486|P09651-2|HNRNPA1;nc|ENSG00000135486|P09651-3|HNRNPA1 18.373094154950223 0.2162240501727768 5 QE{M(Oxidation (M))|F} 3 8 15.802 0.0 0.0 1.2447 0.0 0.0 181.07626015695888 681.3085421197874 862.3848022767463 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 QE{M(Oxidation (M))|F} 1.2447 - 81 + 1 2.224 56431.0 0.5600000023841858 3228 4268 7481 SUDHL4_400M_050219_1,7498 SUDHL4_400M_050219_1,7498,HLRDYFEQY False True HLRDYFEQY 39.852375 635.796557605267 498710.09375 7481.0 ENSG00000135486|ENST00000340913|HNRNPA1;;chr12:54282662-54282800|48|694.65|0.0|26.05|+|ENST00000677249|HNRNPA1,HNRNPA1;;nc|ENSG00000135486|P09651-3|HNRNPA1;;ENSG00000224578|ENST00000565308|HNRNPA1L3;;chr12:54283967-54284240|48|13.83|0.0|20.4|+|ENST00000677375|HNRNPA1,HNRNPA1;;ENSG00000139675|ENST00000357495|HNRNPA1L2;;ENST00000426371.2_1_11:74065594-74065891:+|nuORF;;ENST00000521638.1_1_5:153717591-153717873:-|nuORF;;ENST00000510646.1_1_5:135764749-135765112:+|nuORF;;nc|ENSG00000135486|P09651-2|HNRNPA1 4.810476779937744 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7499 39.86 450.0 315000.0 25 0 19063.0 + 22363 AGGDWFTSR 9 171 498.8073836681661 995.600214403132 2 498.8083679080009 MULTI CID FTMS 0 0 0 7481 117828.2578125 0.6247235408836402 -3 0.2920417785644531 18 Unmodified _LPSPLKQTI_ ENST00000468280.5_1_19:52693376-52714746:+|nuORF;ENSG00000105568|ENST00000322088|PPP2R1A 57.72198328787511 0.0273433238377839 5 {I|L}PSP{I|L}[KQ]T{I|L} 9 0 + 69.918 0.0 0.0 7.0227 7.0227 94.192 0.0 0.0 0.0 31.280469900409088 12.433170651070547 12.433170651070547 12.433170651070547 0 1.1382104921644451 1.5228787452803376 0.6139829889124311 0.2887254899964357 + + {I|L}PSP{I|L}[KQ]T{I|L};{I|L}PSP{I|L}[WK]R;{I|L}P[YR][H{I|L}]VV;[{I|L}P]S{[TV]|[{I|L}S]}[{I|L}A]A[KP];[PS]{I|L}{[TV]|[{I|L}S]}[{I|L}A]A[KP];[{I|L}P]{[WT]|[RM]}[RV][KP];[{I|L}P]{[WT]|[RM]}[{I|L}A]A[KP];{I|L}[{I|L}A]MRKKH 7.0227;5.7739;2.1615;1.6086;1.3371;0.64848;0.45033;0.083064 +;-;-;-;-;-;-;- + 2000 + 1 2.224 108997.0 1.0 3229 4268 7481 SUDHL4_400M_050219_1,7499 SUDHL4_400M_050219_1,7499,LPSPLKQTI True True AGGDWFTSR 39.86035 498.808367908001 489201.03125 7481.0 ENST00000468280.5_1_19:52693376-52714746:+|nuORF;;ENSG00000105568|ENST00000322088|PPP2R1A 5.546217600504558 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7501 39.866 54.0 1036400.0 25 0 220700.0 -1 LGGRRIAE 8 88 457.2639520411654 912.5133511491308 2 457.2643310427666 MULTI CID FTMS 0 0 0 7500 1306148.375 0.91702965290316 3 -0.1346244812011718 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LGGRRIAE_ ENST00000483600.1_1_2:100726370-100726484:-|nuORF 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.221 46884.1 1.0 3230 4269 7500 SUDHL4_400M_050219_1,7501 SUDHL4_400M_050219_1,7501,LGGRRIAE False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7502 39.867 53.0 1443200.0 25 0 230180.0 + 44163 YLDPVQRDL 9 66 559.7958599175745 1117.5771669019489 2 559.7962524294853 MULTI CID FTMS 0 0 0 7500 1045930.625 0.8009948962863939 -1 0.1221199035644531 2 Unmodified _YLDPVQRDL_ ENST00000467680.5_1_7:99159903-99161679:+|nuORF;nc|ENSG00000197343|Q8N720-2|ZNF655 41.95555342248728 0.0647214845423414 5 Y{I|L}DPVQ[RD]{I|L} 9 0 + 83.21 0.0 0.0 7.4456 7.4456 93.259 0.0 0.0 0.0 55.04940636348586 0.2018122933698407 0.2018122933698407 9.208187539523747 0 0.9247425010840048 2.0 0.3807196863200844 0.7302046884880937 + + Y{I|L}DPVQ[RD]{I|L};Y{I|L}DPV[AG][RD]{I|L};Y{I|L}D{I|L}[NP][RD]{I|L};[Y{I|L}][WP]{[DA]|[EG]}{I|L}VAA 7.4456;6.6216;5.8351;1.8919 +;-;-;- + 201 + 1 2.221 60791.9 1.0 3231 4269 7500 SUDHL4_400M_050219_1,7502 SUDHL4_400M_050219_1,7502,YLDPVQRDL True True YLDPVQRDL 39.866921 559.796252429485 11431897.0 7500.0 nc|ENSG00000197343|Q8N720-2|ZNF655;;ENST00000467680.5_1_7:99159903-99161679:+|nuORF 6.2392401695251465 2.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_1 7503 39.868 19.0 3131100.0 25 0 387110.0 + 34816 SQFGTVTRF 9 67 521.769775435465 1041.52499793773 2 521.7697631716728 MULTI CID FTMS 0 0 0 7500 2881894.75 0.89347945449258 -1 0.1221199035644531 3 Unmodified _SQFGTVTRF_ ENSG00000155438|ENST00000285814|NIFK;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 53.40400417844725 0.0329064971918313 5 {[QS]|[NT]}{M(Oxidation (M))|F}GTVT[R{M(Oxidation (M))|F}] 9 0 + 68.166 0.0 0.0 6.5448 6.5448 89.916 0.0 0.0 0.0 31.113003817738694 5.642492736872597 5.642492736872597 8.858696646399906 0 1.0 1.3010299956639813 1.2302046884880935 0.0 + + {[QS]|[NT]}{M(Oxidation (M))|F}GTVT[R{M(Oxidation (M))|F}];{[QS]|[NT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}KVTW 6.5448;5.6942 +;- + 141 + 1 2.221 51585.2 1.0 3232 4269 7500 SUDHL4_400M_050219_1,7503 SUDHL4_400M_050219_1,7503,SQFGTVTRF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7504 39.869 49.0 1292500.0 25 0 145140.0 + 27166 VIFPEGTRY 9 65 541.2702086245408 1080.5258643158816 2 541.2710449099541 MULTI CID FTMS 0 0 0 7500 624278.125 0.5529288130136352 -2 0.2461090087890625 4 Unmodified _PFVGGTYFPP_ ENSG00000155189|ENST00000285518|AGPAT5 24.020572477871973 0.4289996903560794 5 {I|L}MW 3 10 50.005 0.0 0.0 4.6278 0.0 0.0 0.0 647.3166841025198 647.3166841025198 19.424172189740784 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}MW 4.6278 - 62 + 1 2.221 52992.4 1.0 3233 4269 7500 SUDHL4_400M_050219_1,7504 SUDHL4_400M_050219_1,7504,PFVGGTYFPP False False VIFPEGTRY 39.869411 541.271044909954 1804663.375 7500.0 ENSG00000155189|ENST00000285518|AGPAT5 1.0710317144791286 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7505 39.873 195.0 507560.0 25 0 86444.0 30419 RCHPGPGA 8 109 397.6911167917891 793.3676806503782 2 397.6913329958916 MULTI CID FTMS 0 0 0 7500 276610.4375 0.5613117630809902 -2 0.2461090087890625 5 Unmodified _RCHPGPGA_ ENST00000567020.6_2_16:2546055-2546238:+|nuORF 2.889219685676258 0.8067950007271085 5 {[QN]|[E{I|L}]|[KN]}PY{[WS]|[C(Carbamidomethyl (C)){I|L}]} 6 7 + 28.451 0.0 0.0 3.5861 3.5861 84.161 0.0 0.0 0.0 3.044745275933132 0.3011839701224161 0.3011839701224161 9.864692631441784 0 0.2614393726401688 1.3010299956639813 1.0941876774005248 0.0 {[QN]|[E{I|L}]|[KN]}PY{[WS]|[C(Carbamidomethyl (C)){I|L}]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]{[QN]|[E{I|L}]|[KN]}[NG]A 3.5861;2.3427;0.84038 -;-;- 100 1 2.221 82758.2 1.0 3234 4269 7500 SUDHL4_400M_050219_1,7505 SUDHL4_400M_050219_1,7505,RCHPGPGA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7506 39.877 211.0 320400.0 25 0 38351.0 + 44179 YLEPKLTQV 9 92 545.8109844666562 1089.6074160001124 2 545.8120605349541 MULTI CID FTMS 0 0 0 7500 182124.546875 0.6792436018601624 -2 0.2461090087890625 6 Unmodified _YLEPKLTQV_ ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4;nc|ENSG00000068878|Q14997-3|PSME4 41.8396318013385 0.0653578398400075 5 [Y{I|L}]{M(Oxidation (M))|F}VQT{I|L}P 8 6 53.286 0.0 0.0 4.8904 0.0 0.0 0.0 125.07239710025624 125.07239710025624 28.38721830506074 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.805462187404089 0.3807196863200844 [Y{I|L}]{M(Oxidation (M))|F}VQT{I|L}P 4.8904 - 559 + 1 2.221 58534.7 1.0 3235 4269 7500 SUDHL4_400M_050219_1,7506 SUDHL4_400M_050219_1,7506,YLEPKLTQV True True YLEPKLTQV 39.877154 545.812060534954 1567639.5 7500.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4;;nc|ENSG00000068878|Q14997-3|PSME4 4.510567824045817 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7507 39.881 174.0 320370.0 25 0 43802.0 + 17413 KMSELQTYV 9 87 549.7781361346327 1097.5417193360654 2 549.7771484255791 MULTI CID FTMS 0 0 0 7500 156847.46875 0.6507224643736601 -2 0.2461090087890625 7 Unmodified _KMSELQTYV_ ENSG00000117724|ENST00000366955|CENPF 22.736283301280096 0.2418982879461534 5 [{I|L}T][YN]PQT 7 7 34.742 0.0 0.0 3.1654 0.0 0.0 0.0 277.117166753037 277.117166753037 20.76229158546596 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.805462187404089 0.0 [{I|L}T][YN]PQT 3.1654 - 365 1 2.221 47341.4 1.0 3236 4269 7500 SUDHL4_400M_050219_1,7507 SUDHL4_400M_050219_1,7507,KMSELQTYV False True KMSELQTYV 39.88055 549.777148425579 981062.625 7500.0 ENSG00000117724|ENST00000366955|CENPF 2.490762631098429 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7508 39.894 800.0 83714.0 25 0 2734.0 7319 EEWFKSRFTVL 11 107 721.3802570325815 1440.745961131963 2 721.3815795779228 MULTI CID FTMS 0 0 0 7500 81346.0703125 1.0 0 0.0 8 Unmodified _EEWFKSRFTVL_ ENSG00000277586|ENST00000610854|NEFL 7.101721422024254 0.8416415510090076 5 {[SA]|[TG]}GP[WK][PS]QSANV{I|L} 14 10 + 68.717 0.0 0.0 4.7695 4.7695 81.565 0.0 0.0 0.0 4.115128158613103 16.667853209646168 4.115128158613103 4.115128158613103 0 0.5 0.744727494896694 1.4604093769761874 0.805462187404089 {[SA]|[TG]}GP[WK][PS]QSANV{I|L};{[QS]|[NT]}P[WK][PS]QSANV{I|L};[PS]Q[WK][PS]QSANV{I|L};{[SA]|[TG]}GP[WK]Q[PS]SANV{I|L};{[QS]|[NT]}P[WK]Q[PS]SANV{I|L};{[SA]|[TG]}GP[WK]Q[RD]ANV{I|L};[PS]Q[WK]Q[PS]SANV{I|L};{[SA]|[TG]}NV[HT]S{[QN]|[E{I|L}]|[KN]}SANV{I|L};{[SA]|[TG]}GGV[HT]S{[QN]|[E{I|L}]|[KN]}SANV{I|L};{[QS]|[NT]}P[WK]Q[RD]ANV{I|L} 4.7695;4.4839;4.2636;4.1829;3.8973;3.7201;3.677;3.5961;3.5579;3.4363 -;-;-;-;-;-;-;-;-;- 697 1 2.221 53532.7 0.550000011920929 3237 4269 7500 SUDHL4_400M_050219_1,7508 SUDHL4_400M_050219_1,7508,EEWFKSRFTVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7509 39.898 196.0 422090.0 25 0 24497.0 + 29098 QENWYERWHR 10 92 752.347061985825 1502.67957103845 2 752.3459960818291 MULTI CID FTMS 0 0 0 7500 273939.46875 0.9150337842951228 -2 0.2461090087890625 9 Unmodified _QENWYERWHR_ REV__ENSG00000065308|ENST00000182527|TRAM2 5.731851221503515 0.7001233259664787 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SEE 5 -1 40.628 0.0 0.0 2.7037 0.0 0.0 0.0 897.4243280268868 897.4243280268868 17.106062158932435 0.0 0.0 0.0 0 0.0 0.0 1.4731975075880328 0.9698565171985376 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}SEE 2.7037 - 647 1 2.221 64534.6 1.0 3238 4269 7500 SUDHL4_400M_050219_1,7509 SUDHL4_400M_050219_1,7509,QENWYERWHR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7511 39.903 36.0 1368400.0 25 0 301010.0 + 15029 ILTDITKGV 9 62 480.29246381063473 958.5703746880696 2 480.2924682497978 MULTI CID FTMS 0 0 0 7510 1191253.875 0.2015860433700068 2 -0.0968055725097656 1 Unmodified _ILTDITKGV_ ENSG00000167658|ENST00000309311|EEF2 31.26834338654808 0.1333407332142048 5 {I|L}{I|L}TD{I|L}TK[VG] 9 0 + 69.712 0.0 0.0 7.2725 7.2725 96.735 0.0 0.0 0.0 48.50943445995813 1.5779259536583083 1.5779259536583083 44.829666607012186 0 0.4247425010840047 2.0 0.5 0.0 + + {I|L}{I|L}TD{I|L}TK[VG];{I|L}{I|L}[RP][HQ][VP];[{I|L}T]DT[KG][{I|L}V]{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}T[KG][{I|L}V]{I|L} 7.2725;2.5958;2.4451;1.4101 +;-;-;- + 134 + 1 2.221 44055.4 1.0 3239 4270 7510 SUDHL4_400M_050219_1,7511 SUDHL4_400M_050219_1,7511,ILTDITKGV False True ILTDITKGV 39.902892 480.292468249798 56401370.5 7510.0 ENSG00000167658|ENST00000309311|EEF2 4.208668947219849 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7512 39.904 62.0 684170.0 25 0 79255.0 37450 TLDSGQISAL 10 83 502.76561628069976 1003.5166796281997 2 502.7662841677666 MULTI CID FTMS 0 0 0 7510 452721.8125 0.3046684728076131 2 -0.0968055725097656 2 Unmodified _TLDSGQISAL_ nc|ENSG00000140403|Q8WW22-3|DNAJA4 20.453626601364224 0.5043500229302764 5 [{I|L}T]DTA 5 6 31.655 0.0 0.0 3.1545 0.0 0.0 0.0 499.2551610777724 499.2551610777724 18.467874862246564 0.0 0.0 0.0 0 0.0 2.0 0.6505149978319906 0.0 [{I|L}T]DTA 3.1545 - 153 1 2.221 40081.0 1.0 3240 4270 7510 SUDHL4_400M_050219_1,7512 SUDHL4_400M_050219_1,7512,TLDSGQISAL False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 7513 39.906 74.0 652540.0 25 0 109590.0 + 12966 HAIPPTLAM 9 66 475.7597802154014 949.5050074976028 2 475.7600280642509 MULTI CID FTMS 0 0 0 7510 646846.875 0.4709199518667032 19 -0.7547073364257812 3 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 5 [{I|L}A]HP[TP]{I|L}AM 9 2 + 35.044 0.0 0.0 3.6908 3.6908 78.225 0.0 0.0 0.0 2.1640848814329487 16.975656095785723 2.1640848814329487 3.767507096020996 0 0.8935078169319297 0.8538719643217619 1.0 0.0 [{I|L}A]HP[TP]{I|L}AM;[HA]{I|L}P[TP]{I|L}AM;[YG]{I|L}[TP][R{I|L}]M;[YG]{I|L}[TP]P[R{M(Oxidation (M))|F}];[HT][RH]P[R{M(Oxidation (M))|F}];[HT][RH][R{I|L}]M 3.6908;3.294;2.5144;2.5144;0.8936;0.8936 -;+;-;-;-;- + 117 1 2.221 41722.4 1.0 3241 4270 7510 SUDHL4_400M_050219_1,7513 SUDHL4_400M_050219_1,7513,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7514 39.908 58.0 745630.0 25 0 43941.0 + 25185 MSSPLSKEL 9 80 496.25887245159726 990.5031919699944 2 496.2593871951103 MULTI CID FTMS 0 0 0 7510 585567.1875 0.4783541990217329 2 -0.0968055725097656 4 Unmodified _MSSPLSKEL_ ENSG00000037241|ENST00000265100|RPL26L1;ENSG00000161970|ENST00000648839|RPL26;ENST00000451325.1_1_10:5346696-5346741:-|nuORF;ENST00000578115.1_1_17:8285406-8285628:-|nuORF;ENST00000602923.1_1_11:2356544-2356979:-|nuORF 36.506200033944 0.094635877243972 5 MSSP{I|L}S 6 3 52.0 0.0 0.0 5.2498 0.0 0.0 0.0 385.20993982486567 385.20993982486567 3.69325543266271 0.0 0.0 0.0 0 0.5484550065040281 1.6989700043360187 0.3494850021680094 0.0 + MSSP{I|L}S 5.2498 + + 645 + 1 2.221 41341.2 1.0 3242 4270 7510 SUDHL4_400M_050219_1,7514 SUDHL4_400M_050219_1,7514,MSSPLSKEL True True MSSPLSKEL 39.907573 496.25938719511 6070502.0 7510.0 ENST00000602923.1_1_11:2356544-2356979:-|nuORF;;ENST00000451325.1_1_10:5346696-5346741:-|nuORF;;ENSG00000037241|ENST00000265100|RPL26L1;;ENSG00000161970|ENST00000648839|RPL26;;ENST00000578115.1_1_17:8285406-8285628:-|nuORF 3.334218263626098 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7515 39.909 47.0 988910.0 25 0 112080.0 + 9261 FHLPGPVT 8 76 434.2415237245979 866.4684945159959 2 434.2412292361259 MULTI CID FTMS 0 0 0 7510 554224.0625 0.421210919316379 4 -0.14739990234375 5 Unmodified _FHLPGPVT_ REV__ENSG00000136840|ENST00000335791|ST6GALNAC4;REV__ENST00000467674.5_1_9:130672274-130679146:-|nuORF;REV__ENST00000495983.1_1_9:130672770-130677033:-|nuORF 13.50788311687929 0.7113601687236069 5 {I|L} 1 -1 11.42 0.0 0.0 1.318 0.0 0.0 735.3732929552522 0.0 735.3732929552522 0.0 5.178226077404541 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.318 + + 29 + 1 2.221 41645.7 1.0 3243 4270 7510 SUDHL4_400M_050219_1,7515 SUDHL4_400M_050219_1,7515,FHLPGPVT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7516 39.911 85.0 390870.0 25 0 28887.0 + 1364 ALAAARVNN 9 75 450.25594765567865 898.4973423781573 2 450.2558166384697 MULTI CID FTMS 0 0 0 7510 464553.15625 0.7908384002590998 2 -0.0968055725097656 6 Unmodified _ALAAARVNN_ REV__ENSG00000175216|ENST00000529230|CKAP5;REV__nc|ENSG00000175216|Q14008-2|CKAP5;REV__nc|ENSG00000175216|Q14008-3|CKAP5 14.581692164780916 0.4419739649577144 5 [{I|L}A]AAA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}P] 9 -1 + 16.109 0.0 0.0 1.7929 1.7929 75.123 0.0 0.0 0.0 4.51553812979974 -12.730012720637376 -12.730012720637376 3.4678748622465623 0 0.0 1.154901959985743 0.0 0.0 [{I|L}A]AAA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}P];[{I|L}A]VN{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}VA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}P];[{I|L}A]VGG{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{I|L}P] 1.7929;1.407;0.65261;0.37611 -;-;-;- 59 1 2.221 31314.0 1.0 3244 4270 7510 SUDHL4_400M_050219_1,7516 SUDHL4_400M_050219_1,7516,ALAAARVNN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7517 39.914 161.0 344250.0 25 0 41248.0 27600 PLEASLPP 8 96 412.23068911483887 822.4468252964778 2 412.2304565310478 MULTI CID FTMS 0 0 0 7510 300117.6875 0.6221752980800203 2 -0.0968055725097656 7 Unmodified _PLEASLPP_ ENSG00000142149|ENST00000270112|HUNK 5.760428011301431 0.7893668129297577 5 E 1 7 5.3615 0.0 0.0 0.6519 0.0 0.0 411.2428896048746 279.14560877017817 690.3884983750528 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 + E 0.6519 + + 11 + 1 2.221 49899.7 1.0 3245 4270 7510 SUDHL4_400M_050219_1,7517 SUDHL4_400M_050219_1,7517,PLEASLPP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7518 39.917 157.0 287840.0 25 0 41257.0 + 11166 GELGNGNIKL 10 76 507.7827702047482 1013.5509874762964 2 507.7829772830009 MULTI CID FTMS 0 0 0 7510 197540.46875 0.6252085662137273 -1 0.0378189086914062 8 Unmodified _GELGNGNIKL_ ENSG00000132646|ENST00000379143|PCNA 47.74868867922204 0.0933642699623533 5 {[DA]|[EG]}{I|L}GN[NG]{I|L}K{I|L} 10 0 + 66.024 0.0 0.0 6.5141 6.5141 90.576 0.0 0.0 0.0 51.33085333508717 12.01667520279372 12.01667520279372 9.164539485499256 0 0.8807196863200843 1.6989700043360187 0.0 0.6861818737241735 + + {[DA]|[EG]}{I|L}GN[NG]{I|L}K{I|L};{[DA]|[EG]}{I|L}GGG[NG]{I|L}K{I|L};{[DA]|[EG]}{I|L}GN[K{I|L}][NG]{I|L};W{I|L}GN[K{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]};{[DA]|[EG]}{I|L}GN[K{I|L}]{[QG]|[NA]}V;W{I|L}[KP]DDK{I|L};W{I|L}GGG[K{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]};W{[{M(Oxidation (M))|F}H]|[RQ]}[NG]{I|L}K{I|L};W{[{M(Oxidation (M))|F}H]|[RQ]}[K{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]} 6.5141;5.6099;4.2671;3.7512;3.7007;3.5542;2.8374;2.8029;0.81456 +;-;-;-;-;-;-;-;- + 99 + 1 2.221 40768.6 1.0 3246 4270 7510 SUDHL4_400M_050219_1,7518 SUDHL4_400M_050219_1,7518,GELGNGNIKL True True GELGNGNIKL 39.916987 507.782977283001 1511932.875 7510.0 ENSG00000132646|ENST00000379143|PCNA 5.841992378234863 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7519 39.921 214.0 298150.0 25 0 38878.0 + 41693 VPSAVALGMAI 11 99 514.7947005005501 0 514.7950317263603 PEAK CID FTMS 0 0 0 7510 150625.53125 1.0 0 0.0 9 Unmodified _VPSAVALGMAI_ ENSG00000110057|ENST00000227471|UNC93B1;ENST00000528096.1_1_11:67766987-67770655:-|nuORF;ENST00000530138.3_1_11:67766987-67771573:-|nuORF 18.1463463914782 0.3750318954284983 5 M{I|L}Q{I|L} 4 9 23.052 0.0 0.0 2.2434 0.0 0.0 202.1326006087189 337.15195642642817 539.284557035147 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.4247425010840047 M{I|L}Q{I|L} 2.2434 - 205 + 1 2.221 54006.1 1.0 3247 4270 7510 SUDHL4_400M_050219_1,7519 SUDHL4_400M_050219_1,7519,VPSAVALGMAI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7520 39.935 800.0 113230.0 25 0 9029.3 -1 0 95 626.9747458002374 1877.902408000912 3 626.9735595583916 MULTI CID FTMS 0 0 0 7510 85905.1328125 1.0 0 0.0 10 5 {I|L}H{I|L}{[QS]|[NT]} 5 -1 25.273 0.0 0.0 1.3458 0.0 0.0 1281.5747742486385 0.0 1281.5747742486385 0.0 3.0546218740408904 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {I|L}H{I|L}{[QS]|[NT]} 1.3458 - 113 1 2.221 76035.0 0.5799999833106995 3248 4270 7510 SUDHL4_400M_050219_1,7520 SUDHL4_400M_050219_1,7520, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7521 39.943 438.0 195600.0 25 0 24336.0 + 23352 LTDGHPLTL 9 136 483.7668189225587 965.5190849119174 2 483.7675048708916 MULTI CID FTMS 0 0 0 7510 91088.6484375 0.1540529152513528 -9 0.7240943908691406 11 Unmodified _LTDGHPLTL_ nc|ENSG00000175768|Q8N4H5-2|TOMM5;nc|ENSG00000175768|Q8N4H5-3|TOMM5 52.268347100219714 0.0353964759249114 5 {I|L}T[HM][TA]PE 8 6 50.178 0.0 0.0 5.197 0.0 0.0 0.0 82.06692682437733 82.06692682437733 3.770983586245279 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 1.2720774603115346 0.0 {I|L}T[HM][TA]PE 5.197 - 505 + 1 2.221 72009.0 1.0 3249 4270 7510 SUDHL4_400M_050219_1,7521 SUDHL4_400M_050219_1,7521,LTDGHPLTL True True LTDGHPLTL 39.942671 483.767504870892 3317665.25 7510.0 nc|ENSG00000175768|Q8N4H5-3|TOMM5;;nc|ENSG00000175768|Q8N4H5-2|TOMM5 5.280296802520752 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 7522 39.947 220.0 221820.0 25 0 21380.0 + 8974 FASELSRSL 9 91 505.2696247033431 1008.5246964734862 2 505.2693969607353 MULTI CID FTMS 0 0 0 7510 88003.8515625 1.0 0 0.0 12 Unmodified _FASELSRSL_ ENSG00000075131|ENST00000261881|TIPIN 31.26834338654808 0.1333407332142048 5 {I|L}ESAE 5 7 32.251 0.0 0.0 3.1978 0.0 0.0 461.26060683418126 0.0 461.26060683418126 0.0 16.052659518797938 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}ESAE 3.1978 - 121 1 2.221 44445.9 1.0 3250 4270 7510 SUDHL4_400M_050219_1,7522 SUDHL4_400M_050219_1,7522,FASELSRSL False True FASELSRSL 39.946816 505.269396960735 515733.1875 7510.0 ENSG00000075131|ENST00000261881|TIPIN 3.047569990158081 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7523 39.949 124.0 324220.0 25 0 29347.0 + + 15767 RIMEAIENV 9 85 537.7977383279541 0 537.7989990115166 PEAK CID FTMS 0 0 0 7510 217991.984375 0.2749011210198954 2 -0.0968055725097656 13 Unmodified _ISDQSKRQL_ ENSG00000129317|ENST00000344862|PUS7L;nc|ENSG00000129317|Q9H0K6-2|PUS7L 10.823927491677226 0.3028200641087142 5 DE{I|L} 3 -1 16.198 0.0 0.0 1.5088 0.0 0.0 116.12030468149564 597.2833956354124 713.403700316908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DE{I|L} 1.5088 - 23 + 1 2.221 41006.9 1.0 3251 4270 7510 SUDHL4_400M_050219_1,7523 SUDHL4_400M_050219_1,7523,ISDQSKRQL False False RIMEAIENV 39.949377 537.798999011517 240371.734375 7510.0 ENSG00000129317|ENST00000344862|PUS7L;;nc|ENSG00000129317|Q9H0K6-2|PUS7L 0.9608117093642552 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7525 39.955 145.0 421240.0 25 0 52066.0 + 42986 VVVAAAFS 8 103 382.220068400061 762.425583866922 2 382.2205383181572 MULTI CID FTMS 0 0 0 7524 321476.9375 0.0825251735880476 -8 0.6274833679199219 1 Unmodified _VVVAAAFS_ REV__ENSG00000109736|ENST00000355443|MFSD10;REV__ENST00000514031.5_1_4:2932567-2933551:-|nuORF 0.7936320650641473 0.8195151834710337 5 E 1 -1 9.2917 0.0 0.0 1.2187 0.0 0.0 381.2407254439149 249.1138734213632 630.3545988652781 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 E 1.2187 - 7 + 1 2.221 51483.2 1.0 3252 4271 7524 SUDHL4_400M_050219_1,7525 SUDHL4_400M_050219_1,7525,VVVAAAFS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7526 39.969 800.0 134830.0 25 0 22475.0 -1 0 107 958.4423930817278 2872.305349845384 3 959.1077148318292 MULTI CID FTMS 0 0 0 7524 154905.625 0.9219447924509212 -2 0.0890960693359375 2 5 VGKT{I|L} 5 -1 24.865 0.0 0.0 0.86568 0.0 0.0 1931.75018734714 439.2197359674438 2370.9699233145834 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 VGKT{I|L} 0.86568 - 371 + 1 2.221 84930.8 0.6100000143051147 3253 4271 7524 SUDHL4_400M_050219_1,7526 SUDHL4_400M_050219_1,7526, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7527 39.977 463.0 237940.0 25 0 13061.0 -1 0 112 909.931417879412 0 909.9326049685478 PEAK CID FTMS 0 0 0 7524 159202.109375 0.6117755383692106 -3 0.2112159729003906 3 5 PN{I|L}NADQ[VP]DAN{I|L} 13 -1 85.739 0.0 0.0 4.7165 0.0 0.0 245.09310417266929 208.0729616754516 453.16606584812087 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 2.3525684359364405 PN{I|L}NADQ[VP]DAN{I|L} 4.7165 - 2740 + 1 2.221 75789.8 1.0 3254 4271 7524 SUDHL4_400M_050219_1,7527 SUDHL4_400M_050219_1,7527, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7528 39.981 221.0 272130.0 25 0 35731.0 + 9228 FGQLGREL 8 92 460.25380374847833 918.4930545637568 2 460.2549316287041 MULTI CID FTMS 0 0 0 7524 108487.578125 0.6172493290956591 -2 0.0890960693359375 4 Unmodified _FGQLGREL_ ENSG00000277150|ENST00000622749|F8A3 24.020572477871973 0.5389365498350341 5 {I|L}QGE 4 5 35.79 0.0 0.0 3.8966 0.0 0.0 473.2596379849708 0.0 473.2596379849708 0.0 23.554558650008524 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}QGE 3.8966 - 110 1 2.221 53288.8 1.0 3255 4271 7524 SUDHL4_400M_050219_1,7528 SUDHL4_400M_050219_1,7528,FGQLGREL False True FGQLGREL 39.98105 460.254931628704 1777106.625 7524.0 ENSG00000277150|ENST00000622749|F8A3 1.811881244182587 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7529 39.995 800.0 188880.0 25 0 39878.0 + 32119 RVMEYINRL 9 130 597.3267573977305 1192.6389618622609 2 597.3262206912041 MULTI CID FTMS 0 0 0 7524 88971.0859375 0.4656060737510796 -4 0.335205078125 5 Unmodified _RVMEYINRL_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 16.565877749689598 0.3882643987948875 5 {I|L}[C(Carbamidomethyl (C))K]{I|L}YMN 7 7 46.771 0.0 0.0 3.9216 0.0 0.0 0.0 267.14582239322505 267.14582239322505 23.80091699991595 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.7302046884880937 {I|L}[C(Carbamidomethyl (C))K]{I|L}YMN 3.9216 - 537 + 1 2.221 114718.3 0.5600000023841858 3256 4271 7524 SUDHL4_400M_050219_1,7529 SUDHL4_400M_050219_1,7529,RVMEYINRL False True RVMEYINRL 39.994883 597.326220691204 906278.625 7524.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 3.093483646710714 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7532 40.004 24.0 2615800.0 25 0 411460.0 + 37914 TLYEAVREV 9 69 540.2896250496444 1078.5646971660888 2 540.2904540896416 MULTI CID FTMS 0 0 0 7531 1549875.25 0.613403611298775 -2 0.0495452880859375 1 Unmodified _TLYEAVREV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF 19.361941925380144 0.3125782356748823 5 [{I|L}T]YEAV 6 3 56.159 0.0 0.0 5.2068 0.0 0.0 0.0 399.2002062152281 399.2002062152281 33.22682509756042 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 + [{I|L}T]YEAV 5.2068 + + 83 + 1 2.221 54715.6 1.0 3257 4273 7531 SUDHL4_400M_050219_1,7532 SUDHL4_400M_050219_1,7532,TLYEAVREV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7533 40.005 67.0 681050.0 25 0 77652.0 + 20594 LLPDNVHYV 9 67 535.2874574127852 1068.5603618923703 2 535.2881347537041 MULTI CID FTMS 0 0 0 7531 569279.375 0.462482227493566 4 -0.1176872253417968 2 Unmodified _LLPDNVHYV_ ENSG00000039123|ENST00000230640|MTREX 15.847184025352805 0.4077185912009129 5 {I|L}{I|L}P 3 6 33.2 0.0 0.0 3.107 0.0 0.0 0.0 742.3157355589112 742.3157355589112 5.27565508578121 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}{I|L}P 3.107 + + 79 + 1 2.221 40180.3 1.0 3258 4273 7531 SUDHL4_400M_050219_1,7533 SUDHL4_400M_050219_1,7533,LLPDNVHYV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7534 40.007 60.0 1079800.0 25 0 78375.0 + 32156 RVQGFQVEY 9 83 563.2883076819146 1124.562062430629 2 563.2881957888603 MULTI CID FTMS 0 0 0 7531 524136.3125 0.9882722684365778 1 -0.0465774536132812 3 Unmodified _RVQGFQVEY_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 30.63653989081413 0.1413794767160703 5 {[QV]|[N{I|L}]|[RA]|[KV]}RG{M(Oxidation (M))|F}QVEY 9 2 + 65.984 0.0 0.0 5.8675 5.8675 87.064 0.0 0.0 0.0 6.777807052660805 16.478174818886373 6.777807052660805 6.777807052660805 0 0.4247425010840047 0.8538719643217619 0.0 0.7614393726401688 {[QV]|[N{I|L}]|[RA]|[KV]}RG{M(Oxidation (M))|F}QVEY;{[VA]|[{I|L}G]}GRG{M(Oxidation (M))|F}QVEY;{[QV]|[N{I|L}]|[RA]|[KV]}A{M(Oxidation (M))|F}AAQVEY;{[QV]|[N{I|L}]|[RA]|[KV]}RG{M(Oxidation (M))|F}[AG]VEY;{[VA]|[{I|L}G]}KA{[MS]|[{M(Oxidation (M))|F}A]}QVEY;[KA]VA{[MS]|[{M(Oxidation (M))|F}A]}QVEY;{[QV]|[N{I|L}]|[RA]|[KV]}A{M(Oxidation (M))|F}[RN]VEY;{[VA]|[{I|L}G]}K{M(Oxidation (M))|F}AAQVEY;{[VA]|[{I|L}G]}GRG{M(Oxidation (M))|F}[AG]VEY;{[QV]|[N{I|L}]|[RA]|[KV]}A{M(Oxidation (M))|F}AA[AG]VEY 5.8675;5.2648;5.1598;5.0487;4.9438;4.5927;4.5789;4.4764;4.4499;4.3449 -;-;-;-;-;-;-;-;-;- 678 1 2.221 55613.0 1.0 3259 4273 7531 SUDHL4_400M_050219_1,7534 SUDHL4_400M_050219_1,7534,RVQGFQVEY False True RVQGFQVEY 40.00682 563.28819578886 3123955.75 7531.0 nc|ENSG00000124214|O95793-2|STAU1;;nc|ENSG00000124214|O95793-3|STAU1;;ENSG00000124214|ENST00000371856|STAU1 5.229650179545085 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7535 40.01 156.0 396240.0 25 0 47439.0 + 36934 TEVLAPALA 9 91 442.7566824567394 883.4988119802788 2 442.7566406130791 MULTI CID FTMS 0 0 0 7531 251458.546875 0.3712954200118217 8 -0.222503662109375 4 Unmodified _TEVLAPALA_ REV__ENSG00000112282|ENST00000368068|MED23;REV__nc|ENSG00000112282|Q9ULK4-2|MED23;REV__nc|ENSG00000112282|Q9ULK4-3|MED23;REV__nc|ENSG00000112282|Q9ULK4-4|MED23;REV__nc|ENSG00000112282|Q9ULK4-5|MED23 4.75600775471527 0.7486543447549536 5 {I|L} 1 -1 9.6041 0.0 0.0 1.0871 0.0 0.0 752.4038850777382 0.0 752.4038850777382 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0871 + + 8 + 1 2.221 54283.7 1.0 3260 4273 7531 SUDHL4_400M_050219_1,7535 SUDHL4_400M_050219_1,7535,TEVLAPALA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7536 40.013 167.0 272170.0 25 0 33267.0 23213 LSSRGQLQL 9 80 501.2911205594207 1000.5676881856414 2 501.2912780642509 MULTI CID FTMS 0 0 0 7531 174965.015625 0.2196322080345444 -16 0.9671173095703124 5 Unmodified _LSSRGQLQL_ ENST00000531038.5_1_4:8472779-8495174:+|nuORF 7.289230182591677 0.6602208344931196 5 {I|L} 1 8 9.7539 0.0 0.0 0.97484 0.0 0.0 869.4730359413039 0.0 869.4730359413039 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.97484 + + 20 + 1 2.221 39696.7 1.0 3261 4273 7531 SUDHL4_400M_050219_1,7536 SUDHL4_400M_050219_1,7536,LSSRGQLQL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7537 40.027 800.0 128280.0 25 0 7793.5 -1 0 113 964.4435795411628 2890.3089092236883 3 964.7782470583916 MULTI CID FTMS 0 0 0 7531 169328.375 0.224808723055147 6 -0.1848220825195312 6 5 [NP]VSESVS[QP]HQ[W{I|L}]D 15 -1 40.65 0.0 0.0 1.4064 0.0 0.0 0.0 1183.5054173626131 1183.5054173626131 20.3596597852934 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.6109243748081782 [NP]VSESVS[QP]HQ[W{I|L}]D 1.4064 - 5635 1 2.221 77385.9 0.7300000190734863 3262 4273 7531 SUDHL4_400M_050219_1,7537 SUDHL4_400M_050219_1,7537, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7538 40.035 464.0 340010.0 25 0 18397.0 + 16273 IVVDNVPQV 9 141 491.7818610630909 981.5491691929816 2 491.7820922732353 MULTI CID FTMS 0 0 0 7531 118249.3046875 0.1694412574513843 -6 0.3847503662109375 7 Unmodified _IVVDNVPQV_ ENSG00000106263|ENST00000360876|EIF3B;nc|ENSG00000106263|P55884-2|EIF3B 64.23631603340823 0.0237365939569086 5 [QA]EV{I|L}V 6 7 44.199 0.0 0.0 4.503 0.0 0.0 0.0 339.16751146469124 339.16751146469124 19.19610251655489 0.0 0.0 0.0 0 0.5 0.721246399047171 0.0 1.2856668758921828 [QA]EV{I|L}V 4.503 - 534 1 2.221 120391.0 1.0 3263 4273 7531 SUDHL4_400M_050219_1,7538 SUDHL4_400M_050219_1,7538,IVVDNVPQV True True IVVDNVPQV 40.035239 491.782092273235 3705976.5 7531.0 nc|ENSG00000106263|P55884-2|EIF3B;;ENSG00000106263|ENST00000360876|EIF3B 4.965015570322673 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7539 40.044 502.0 515050.0 25 0 65708.0 + 30821 RIIDVVYNA 9 162 531.8004047140766 1061.5862564949532 2 531.8015014529228 MULTI CID FTMS 0 0 0 7531 105274.8125 0.0067104293356589 -9 0.6301345825195312 8 Unmodified _RIIDVVYNA_ ENSG00000142937|ENST00000396651|RPS8 66.45667989310934 0.0225072657982126 5 {[QN]|[E{I|L}]|[KN]}[RV]VVYNA 9 3 + 61.084 0.0 0.0 5.754 5.754 81.301 0.0 0.0 0.0 1.4784801607251197 14.97302484056646 1.4784801607251197 1.4784801607251197 0 1.110924374808178 0.744727494896694 0.5866968715561641 1.079689690656103 {[QN]|[E{I|L}]|[KN]}[RV]VVYNA;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]VVYNA;{[QN]|[E{I|L}]|[KN]}[RV]VVYGGA;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]VVYGGA;[{I|L}T][KP][KQ]YNA;VV[W{I|L}]VVYNA;[KP][{I|L}T][KQ]YNA;VV[W{I|L}]VVYGGA;VV[Q{I|L}][KQ]YNA;[{I|L}T][KP]RV{[YD]|[{M(Oxidation (M))|F}M]}A 5.754;5.6148;4.8866;4.7474;3.3824;3.2311;2.4186;2.3637;1.7941;1.6954 -;-;-;-;-;-;-;-;-;- 289 1 2.221 204144.7 1.0 3264 4273 7531 SUDHL4_400M_050219_1,7539 SUDHL4_400M_050219_1,7539,RIIDVVYNA True True RIIDVVYNA 40.044112 531.801501452923 255532176.0 7531.0 ENSG00000142937|ENST00000396651|RPS8 6.798849900563558 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7540 40.046 55.0 810070.0 25 0 58514.0 + 42651 VTVPPGPSL 9 73 433.75257015636254 0 433.7528259158134 PEAK CID FTMS 0 0 0 7531 490246.46875 0.0568271247586061 11 -0.3368377685546875 9 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 48.345845343767074 0.036192834052621 5 P{[MG]|[TS]}V 4 7 9.6927 0.0 0.0 1.1199 0.0 0.0 299.18457038909384 179.0829256647094 478.26749605380326 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 P{[MG]|[TS]}V 1.1199 - 27 + 1 2.221 41051.3 1.0 3265 4273 7531 SUDHL4_400M_050219_1,7540 SUDHL4_400M_050219_1,7540,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7542 40.051 88.0 558880.0 25 0 69036.0 + 10513 FVDEGIKTL 9 80 511.2829385753273 1020.5513242174546 2 511.2820617556572 MULTI CID FTMS 0 0 0 7541 453144.5625 0.9164793442690092 4 -0.0920524597167968 1 Unmodified _FVDEGIKTL_ ENSG00000070501|ENST00000265421|POLB 32.78568957990786 0.1150597335874693 5 [{M(Oxidation (M))|F}V]DE{[VA]|[{I|L}G]}KT{I|L} 9 0 + 28.1 0.0 0.0 2.7534 2.7534 73.926 0.0 0.0 0.0 13.88651550435265 8.830383570932362 8.830383570932362 1.7069622716897506 0 0.805462187404089 0.0 0.5387254899964358 0.0 + + [{M(Oxidation (M))|F}V]DE{[VA]|[{I|L}G]}KT{I|L};[{M(Oxidation (M))|F}V]D[W{I|L}]KT{I|L} 2.7534;2.5861 +;- + 79 + 1 2.221 42025.4 1.0 3266 4274 7541 SUDHL4_400M_050219_1,7542 SUDHL4_400M_050219_1,7542,FVDEGIKTL True True FVDEGIKTL 40.050855 511.282061755657 4818292.5 7541.0 ENSG00000070501|ENST00000265421|POLB 5.148675362269084 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7543 40.065 800.0 134200.0 25 0 9900.4 + 32086 RVLPPSALQSV 11 114 583.8479252155811 1165.681297497962 2 583.8477661013603 MULTI CID FTMS 0 0 0 7541 117088.1875 0.2879417381732898 9 -0.2466545104980468 2 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 60.899326713953855 0.0654953153043458 5 A{I|L}QSV 5 6 47.008 0.0 0.0 4.0327 0.0 0.0 649.3920976109855 0.0 649.3920976109855 0.0 22.598272236268144 0.0 0.0 0 1.2059771852360797 0.0 0.0 0.0 + A{I|L}QSV 4.0327 + + 147 1 2.221 85946.6 0.6100000143051147 3267 4274 7541 SUDHL4_400M_050219_1,7543 SUDHL4_400M_050219_1,7543,RVLPPSALQSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7544 40.067 83.0 902490.0 25 0 157330.0 29715 QPLAAIAP 8 95 390.7332917182137 779.4520305032274 2 390.7328369021416 MULTI CID FTMS 0 0 0 7541 547893.8125 0.3190692393601014 -7 0.4313278198242187 3 Unmodified _QPLAAIAP_ ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:32002284-32014401:+|nuORF;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-5|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1 0.7936320650641473 0.8195151834710337 5 C 1 8 7.4743 0.0 0.0 0.95891 0.0 0.0 390.2221853877962 283.1927584283813 673.4149438161775 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 C 0.95891 - 3 + 1 2.221 62172.3 1.0 3268 4274 7541 SUDHL4_400M_050219_1,7544 SUDHL4_400M_050219_1,7544,QPLAAIAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7545 40.068 72.0 633820.0 25 0 50539.0 + -1 FVKGWGAEY 9 76 528.2545701673204 1054.4945874014406 2 528.7602416872978 MULTI CID FTMS 0 0 0 7541 466090.09375 0.4123144915789322 5 -0.13824462890625 4 Oxidation (M) _VFVMLYHM(Oxidation (M))_ ENSG00000170365|ENST00000302085|SMAD1;nc|ENSG00000175387|Q15796-2|SMAD2;ENSG00000120693|ENST00000379826|SMAD9;nc|ENSG00000166949|P84022-4|SMAD3;nc|ENSG00000120693|O15198-2|SMAD9;nc|ENSG00000166949|P84022-2|SMAD3;ENSG00000166949|ENST00000327367|SMAD3;ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000166949|P84022-3|SMAD3;ENSG00000113658|ENST00000545279|SMAD5 6.354104778181461 0.7857632046190106 5 {[WN]|[YH]}AKE 5 -1 19.208 0.0 0.0 1.8216 0.0 0.0 0.0 423.1747046280463 423.1747046280463 2.218487496163561 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[WN]|[YH]}AKE 1.8216 - 94 1 2.221 41097.5 1.0 3269 4274 7541 SUDHL4_400M_050219_1,7545 SUDHL4_400M_050219_1,7545,VFVMLYHM False False FVKGWGAEY 40.068247 528.760241687298 3533463.75 7541.0 ENSG00000170365|ENST00000302085|SMAD1;;nc|ENSG00000175387|Q15796-2|SMAD2;;ENSG00000120693|ENST00000379826|SMAD9;;nc|ENSG00000166949|P84022-4|SMAD3;;nc|ENSG00000120693|O15198-2|SMAD9;;nc|ENSG00000166949|P84022-2|SMAD3;;ENSG00000166949|ENST00000327367|SMAD3;;ENSG00000175387|ENST00000262160|SMAD2;;nc|ENSG00000166949|P84022-3|SMAD3;;ENSG00000113658|ENST00000545279|SMAD5 5.875092188517253 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7546 40.071 108.0 425290.0 25 0 50278.0 + 7707 ELANLGVEAL 10 86 514.7859307750432 1027.5573086168863 2 514.7842285037041 MULTI CID FTMS 0 0 0 7541 387109.9375 1.0 0 0.0 5 Unmodified _ELANLGVEAL_ REV__ENSG00000253729|ENST00000314191|PRKDC;REV__ENST00000541488.1_1_8:48839745-48841720:-|nuORF;REV__nc|ENSG00000253729|P78527-2|PRKDC 15.248480904072842 0.5916873121453583 5 [AG]EG{I|L}{I|L}R 7 -1 22.885 0.0 0.0 2.2271 0.0 0.0 0.0 328.1466423261912 328.1466423261912 5.878584443078232 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2742275032520141 0.0 [AG]EG{I|L}{I|L}R 2.2271 - 295 1 2.221 39663.8 1.0 3270 4274 7541 SUDHL4_400M_050219_1,7546 SUDHL4_400M_050219_1,7546,ELANLGVEAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7547 40.073 132.0 474200.0 25 0 61644.0 + -1 LLDLCPKV 8 95 479.277087279864 956.539621626528 2 479.2773620486259 MULTI CID FTMS 0 0 0 7541 249278.125 0.3473530080050261 10 -0.2902603149414062 6 Carbamidomethyl (C) _LLDLC(Carbamidomethyl (C))PKV_ REV__ENST00000551766.5_1_16:22437686-22447115:-|nuORF;REV__ENST00000569045.1_1_16:22376319-22447115:-|nuORF;REV__nc|ENSG00000248124|Q2M238|RRN3P1 5.760428011301431 0.7893668129297577 5 {I|L} 1 -1 11.109 0.0 0.0 1.1614 0.0 0.0 825.4446794651983 0.0 825.4446794651983 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1614 + + 50 + 1 2.221 50740.6 1.0 3271 4274 7541 SUDHL4_400M_050219_1,7547 SUDHL4_400M_050219_1,7547,LLDLCPKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7548 40.077 224.0 239220.0 25 0 21196.0 + 34425 SLVSTLLEL 9 92 487.78991121095777 973.5652694887156 2 487.7910339236259 MULTI CID FTMS 0 0 0 7541 91819.5 0.3180018968265332 8 -0.2105522155761718 7 Unmodified _SLVSTLLEL_ REV__ENSG00000065060|ENST00000192788|BLTP3A 12.531546534597751 0.4974689918368763 5 HT{I|L} 3 -1 15.78 0.0 0.0 1.6208 0.0 0.0 604.3680476643 0.0 604.3680476643 0.0 5.865009139149187 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 HT{I|L} 1.6208 - 44 + 1 2.221 45761.0 1.0 3272 4274 7541 SUDHL4_400M_050219_1,7548 SUDHL4_400M_050219_1,7548,SLVSTLLEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7549 40.087 566.0 176330.0 25 0 10094.0 + 37490 TLFPGKVHSL 10 139 549.818253574371 1097.621954215542 2 549.8170043826103 MULTI CID FTMS 0 0 0 7541 82483.453125 1.0 0 0.0 8 Unmodified _TLFPGKVHSL_ ENSG00000178252|ENST00000608424|WDR6;ENST00000420783.7_1_3:49044839-49051550:+|nuORF;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;ENST00000489684.2_1_3:49044864-49050780:+|nuORF 34.93206674587334 0.2110832994570416 5 [{I|L}T]{M(Oxidation (M))|F}P[RK]HTV 9 4 + 56.66 0.0 0.0 5.162 5.162 84.055 0.0 0.0 0.0 10.881007699735818 5.68201724066995 5.68201724066995 5.68201724066995 0 0.4247425010840047 2.0 1.0941876774005248 0.0 [{I|L}T]{M(Oxidation (M))|F}P[RK]HTV;[{I|L}T]{M(Oxidation (M))|F}P[RK]HS{I|L};[{I|L}T]{M(Oxidation (M))|F}P[RK]{I|L}[HS];{[QN]|[E{I|L}]|[KN]}{I|L}[RK]PET{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}[H{I|L}]{I|L}{M(Oxidation (M))|F}T{I|L};[VG][QA][RK]P{M(Oxidation (M))|F}PV;[Q{I|L}]N[RK]P{M(Oxidation (M))|F}PV;{[VA]|[{I|L}G]}AN[RK]P{M(Oxidation (M))|F}PV;[{I|L}T]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]K[KC]{I|L};[VG][KP]HS{I|L}{M(Oxidation (M))|F}T{I|L} 5.162;4.6444;4.3142;2.8728;2.5119;2.4232;2.181;2.1596;2.118;1.8881 -;-;-;-;-;-;-;-;-;- 797 + 1 2.221 80869.0 1.0 3273 4274 7541 SUDHL4_400M_050219_1,7549 SUDHL4_400M_050219_1,7549,TLFPGKVHSL False True TLFPGKVHSL 40.087387 549.81700438261 1028291.125 7541.0 ENST00000420783.7_1_3:49044839-49051550:+|nuORF;;ENST00000471162.5_1_3:49044864-49051550:+|nuORF;;ENST00000489684.2_1_3:49044864-49050780:+|nuORF;;ENSG00000178252|ENST00000608424|WDR6 5.5396835009257 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7550 40.091 160.0 430050.0 25 0 52772.0 40151 VGMKASEATVP 11 93 545.2858221078687 1088.5570912825374 2 545.2857543826103 MULTI CID FTMS 0 0 0 7541 174264.203125 0.211129130757258 -7 0.4313278198242187 9 Unmodified _VGMKASEATVP_ ENST00000319551.12_1_7:149412416-149417105:+|nuORF 17.11289562659939 0.6791789249425932 5 VYMATT{I|L}KY 9 8 + 85.812 0.0 0.0 7.8831 7.8831 96.775 0.0 0.0 0.0 53.64970648723207 14.09256854528806 14.09256854528806 21.938200260161125 0 0.4247425010840047 2.0 0.7742275032520141 0.0 VYMATT{I|L}KY;VYMATT[YK]{I|L};[KP][WR]GAM{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[KP][WR]QM{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 7.8831;5.8678;1.0242;0.42904 -;-;-;- 388 + 1 2.221 59055.8 1.0 3274 4274 7541 SUDHL4_400M_050219_1,7550 SUDHL4_400M_050219_1,7550,VGMKASEATVP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7552 40.1 382.0 225270.0 25 0 10035.0 -1 0 93 946.4338897315608 1890.853226529921 2 946.4343139529228 MULTI CID FTMS 0 0 0 7551 201309.09375 0.3439508738859984 4 -0.0931777954101562 1 5 [MN]PN{I|L}NEEQ 9 -1 72.885 0.0 0.0 3.8546 0.0 0.0 0.0 818.3798922174436 818.3798922174436 41.11432819416656 0.0 0.0 0.0 0 1.2302046884880935 1.6989700043360187 0.3494850021680094 0.0 [MN]PN{I|L}NEEQ 3.8546 - 1098 + 1 2.221 61891.7 1.0 3275 4275 7551 SUDHL4_400M_050219_1,7552 SUDHL4_400M_050219_1,7552, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7553 40.107 409.0 253260.0 25 0 14588.0 37326 TIVRGSKG 8 155 409.2488787716267 816.4832046100535 2 409.2492553591728 MULTI CID FTMS 0 0 0 7551 98111.296875 0.8444521161052517 -1 0.0450668334960937 2 Unmodified _TIVRGSKG_ ENSG00000130669|ENST00000360442|PAK4;nc|ENSG00000130669|O96013-2|PAK4;nc|ENSG00000130669|O96013-4|PAK4 2.059750862983233 0.8118298629782807 5 {M(Oxidation (M))|F} 1 8 13.099 0.0 0.0 1.6043 0.0 0.0 651.4037043432551 0.0 651.4037043432551 0.0 -2.4742501084004687 -2.4742501084004687 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.6043 - 30 + 1 2.221 82168.0 1.0 3276 4275 7551 SUDHL4_400M_050219_1,7553 SUDHL4_400M_050219_1,7553,TIVRGSKG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7554 40.113 289.0 160250.0 25 0 16425.0 -1 0 60 603.9679561883057 1808.882039165117 3 604.2985717654228 MULTI CID FTMS 0 0 0 7551 127154.40625 0.0473038902706821 12 -0.4851036071777344 3 5 {I|L}Q 2 -1 32.831 0.0 0.0 1.815 0.0 0.0 1549.7288847235138 0.0 1549.7288847235138 0.0 19.64333124107817 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 {I|L}Q 1.815 - 28 + 1 2.221 43168.3 1.0 3277 4275 7551 SUDHL4_400M_050219_1,7554 SUDHL4_400M_050219_1,7554, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7557 40.121 59.0 865130.0 25 0 184730.0 + 29376 QKTVMIPP 8 87 457.2639520411654 912.5133511491308 2 457.2643310427666 MULTI CID FTMS 0 0 0 7556 917364.875 0.6440698537842615 11 -0.4889717102050781 1 Unmodified _QKTVMIPP_ REV__ENSG00000196091|ENST00000361466|MYBPC1;REV__nc|ENSG00000196091|Q00872-10|MYBPC1;REV__nc|ENSG00000196091|Q00872-2|MYBPC1;REV__nc|ENSG00000196091|Q00872-3|MYBPC1;REV__nc|ENSG00000196091|Q00872-5|MYBPC1;REV__nc|ENSG00000196091|Q00872-6|MYBPC1;REV__nc|ENSG00000196091|Q00872-7|MYBPC1;REV__nc|ENSG00000196091|Q00872-8|MYBPC1;REV__nc|ENSG00000196091|Q00872-9|MYBPC1;REV__nc|ENSG00000196091|Q00872|MYBPC1 5.230669730166228 0.792582437072536 5 R 1 -1 1.5938 0.0 0.0 0.17466 0.0 0.0 474.2468223023485 279.1449373834594 753.3917596858079 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.17466 - 2 + 1 2.222 44750.6 1.0 3278 4277 7556 SUDHL4_400M_050219_1,7557 SUDHL4_400M_050219_1,7557,QKTVMIPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7558 40.124 108.0 608130.0 25 0 113110.0 + + 29916 SQFGTVTRF 9 69 521.769775435465 1041.52499793773 2 521.7695190310478 MULTI CID FTMS 0 0 0 7556 408646.84375 0.1266935786027108 7 -0.2191505432128906 2 Unmodified _QSFFSLKW_ ENSG00000155438|ENST00000285814|NIFK;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 43.85829265575387 0.1697421968005898 5 {[QS]|[NT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{[TV]|[{I|L}S]}W 8 -1 + 54.491 0.0 0.0 5.2319 5.2319 84.433 0.0 0.0 0.0 16.783343794609138 5.835765856339492 5.835765856339492 5.835765856339492 0 0.8807196863200843 1.3979400086720375 0.7614393726401688 0.4247425010840047 {[QS]|[NT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{[TV]|[{I|L}S]}W;{[QS]|[NT]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}K{[WT]|[RM]}V 5.2319;4.6716 -;- 95 + 1 2.222 56017.8 1.0 3279 4277 7556 SUDHL4_400M_050219_1,7558 SUDHL4_400M_050219_1,7558,QSFFSLKW False False SQFGTVTRF 40.123709 521.769519031048 37183860.0 7556.0 ENSG00000155438|ENST00000285814|NIFK;;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 4.337070782979329 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7559 40.138 800.0 271710.0 25 0 57239.0 -1 0 93 950.222518050136 4746.076207917679 5 950.8241454958916 MULTI CID FTMS 0 0 0 7556 128878.875 1.0 0 0.0 3 5 Q[HA]E[{M(Oxidation (M))|F}T]P{I|L} 8 -1 12.396 0.0 0.0 0.26118 0.0 0.0 550.1927816596252 3269.45784883356 3819.650630493185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q[HA]E[{M(Oxidation (M))|F}T]P{I|L} 0.26118 - 100 + 1 2.222 147030.8 0.7099999785423279 3280 4277 7556 SUDHL4_400M_050219_1,7559 SUDHL4_400M_050219_1,7559, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7561 40.154 800.0 204110.0 25 0 13033.0 -1 VTLVCMSCWL 10 138 642.7934681379013 0 642.7939330935478 PEAK CID FTMS 0 0 0 7560 41793.6484375 0.402066903686494 1 -0.0461921691894531 1 2 Carbamidomethyl (C),Oxidation (M) _VTLVC(Carbamidomethyl (C))M(Oxidation (M))SC(Carbamidomethyl (C))WL_ ENST00000481244.5_1_10:28491134-28569058:-|nuORF 25.399314129420983 0.2547831343944559 5 {I|L}ED 3 -1 25.036 0.0 0.0 1.9505 0.0 0.0 200.11779856891675 723.2809048573301 923.3987034262468 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.5866968715561641 0.0 {I|L}ED 1.9505 - 179 + 1 2.222 124139.1 0.6100000143051147 3281 4278 7560 SUDHL4_400M_050219_1,7561 SUDHL4_400M_050219_1,7561,VTLVCMSCWL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7562 40.156 102.0 586380.0 25 0 66773.0 42588 VTRGIEITV 9 70 494.2955559648979 986.5765589965958 2 494.2952148318291 MULTI CID FTMS 0 0 0 7560 330890.09375 0.3700848555938004 -3 0.0469856262207031 2 Unmodified _VTRGIEITV_ ENSG00000117262|ENST00000313835|GPR89A;ENSG00000188092|ENST00000314163|GPR89B;ENST00000460277.5_1_1:145765021-145811987:-|nuORF;nc|ENSG00000188092|B7ZAQ6-2|GPR89A;nc|ENSG00000188092|B7ZAQ6-3|GPR89A 25.399314129420983 0.2080152500878129 5 {[TV]|[{I|L}S]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VTV 9 4 + 65.353 0.0 0.0 6.6243 6.6243 95.688 0.0 0.0 0.0 14.71726222832956 50.749256301612746 14.71726222832956 65.35335007137462 0 0.5 1.3979400086720375 0.75 0.0 {[TV]|[{I|L}S]}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VTV 6.6243 - 83 1 2.222 51623.4 1.0 3282 4278 7560 SUDHL4_400M_050219_1,7562 SUDHL4_400M_050219_1,7562,VTRGIEITV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7563 40.17 800.0 212950.0 25 0 13349.0 + -1 VIYEGEDPFGC 11 140 643.2736190076378 1284.5326850820754 2 643.2736083865166 MULTI CID FTMS 0 0 0 7560 111155.703125 0.9081300184594866 -1 0.0209426879882812 3 Carbamidomethyl (C) _VIYEGEDPFGC(Carbamidomethyl (C))_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 24.020572477871973 0.5281922720044371 5 [{I|L}V]YEP 5 -1 47.619 0.0 0.0 3.7071 0.0 0.0 0.0 680.2031344049436 680.2031344049436 30.127881306118454 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.805462187404089 0.0 [{I|L}V]YEP 3.7071 - 354 + 1 2.222 129274.5 0.6200000047683716 3283 4278 7560 SUDHL4_400M_050219_1,7563 SUDHL4_400M_050219_1,7563,VIYEGEDPFGC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7564 40.184 800.0 221040.0 25 0 21254.0 + 17365 KMADIEYRL 9 146 569.8015685140491 1137.588584094898 2 569.8009521365166 MULTI CID FTMS 0 0 0 7560 106683.9296875 0.5254089273411625 -2 0.0249557495117187 4 Unmodified _KMADIEYRL_ ENSG00000111445|ENST00000454402|RFC5;nc|ENSG00000111445|P40937-2|RFC5 51.41523569358685 0.0372669606867193 5 KMAD{I|L}E{I|L}RY 9 2 + 69.901 0.0 0.0 6.1447 6.1447 83.65 0.0 0.0 0.0 16.478174818886373 2.470147439154488 2.470147439154488 2.470147439154488 0 1.1307196863200843 0.0 0.0 0.0 KMAD{I|L}E{I|L}RY;KMAD{I|L}EYR{I|L};KMA{I|L}DE{I|L}RY;KMA{I|L}DEYR{I|L};KM{I|L}ADE{I|L}RY;KMW{I|L}E{I|L}RY;KM{I|L}ADEYR{I|L};KMW{I|L}EYR{I|L};KM{I|L}WE{I|L}RY;KM{I|L}WEYR{I|L} 6.1447;5.9275;5.5067;5.2895;5.2807;5.2405;5.0636;5.0234;4.9759;4.7588 -;+;-;-;-;-;-;-;-;- + 537 + 1 2.222 134992.1 0.5799999833106995 3284 4278 7560 SUDHL4_400M_050219_1,7564 SUDHL4_400M_050219_1,7564,KMADIEYRL True True KMADIEYRL 40.183788 569.800952136517 995540.375 7560.0 ENSG00000111445|ENST00000454402|RFC5;;nc|ENSG00000111445|P40937-2|RFC5 6.305319309234619 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7566 40.189 90.0 603910.0 25 0 96360.0 + 12967 HAIPPTLAM 9 71 475.7597802154014 949.5050074976028 2 475.7600280642509 MULTI CID FTMS 0 0 0 7565 685189.3125 0.4988341608082739 28 -1.8094902038574217 1 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 5 [HA]{I|L}P[TP]{I|L}AM 9 0 + 28.267 0.0 0.0 2.977 2.977 75.911 0.0 0.0 0.0 1.0379466712471732 12.14719041932895 1.0379466712471732 3.0102999566398125 0 0.8935078169319297 0.0 1.0 0.0 + + [HA]{I|L}P[TP]{I|L}AM;[{I|L}A]HP[TP]{I|L}AM;[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}A{I|L}AM;[YG]{I|L}[TP][R{I|L}]M;[YG]{I|L}[TP]P[R{M(Oxidation (M))|F}];[{M(Oxidation (M))|F}T]{I|L}{I|L}[RV]AM;[HT][RH]P[R{M(Oxidation (M))|F}];[HT][RH][R{I|L}]M;[{M(Oxidation (M))|F}T]{I|L}{I|L}GP[R{M(Oxidation (M))|F}];[{M(Oxidation (M))|F}T]{I|L}{I|L}G[R{I|L}]M 2.977;2.6599;2.4263;2.1973;2.1973;1.521;0.76202;0.76202;0.48597;0.48597 +;-;-;-;-;-;-;-;-;- + 171 1 2.222 44331.6 1.0 3285 4279 7565 SUDHL4_400M_050219_1,7566 SUDHL4_400M_050219_1,7566,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7567 40.192 192.0 232590.0 25 0 16615.0 + 23004 LSHLMVSI 8 93 450.25594765567865 898.4973423781573 2 450.2555419802666 MULTI CID FTMS 0 0 0 7565 179555.40625 0.3056685942742914 11 -0.4759445190429687 2 Unmodified _LSHLMVSI_ REV__ENST00000370109.7_1_1:101479345-101487245:-|nuORF;REV__ENST00000492067.5_1_1:101455997-101487245:-|nuORF;REV__nc|ENSG00000117543|Q9H2P9-5|DPH5 13.50788311687929 0.7113601687236069 5 {I|L} 1 -1 13.495 0.0 0.0 1.5019 0.0 0.0 767.4021560762027 0.0 767.4021560762027 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5019 + + 39 + 1 2.222 40091.0 1.0 3286 4279 7565 SUDHL4_400M_050219_1,7567 SUDHL4_400M_050219_1,7567,LSHLMVSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7568 40.194 60.0 795800.0 25 0 84644.0 + 43632 YALNHTLSV 9 93 509.2736407593496 1016.5327285854992 2 509.2719909548759 MULTI CID FTMS 0 0 0 7565 595897.0625 0.9748996659451136 -1 0.0461921691894531 3 Unmodified _YALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 34.10243960390752 0.1078313939113124 5 {[TV]|[{I|L}S]}[HQ]{I|L}SV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 9 6 + 33.931 0.0 0.0 3.3379 3.3379 80.702 0.0 0.0 0.0 8.061799739838879 5.6424927368726046 5.6424927368726046 8.061799739838879 0 0.0 1.6989700043360187 0.3807196863200844 0.0 {[TV]|[{I|L}S]}[HQ]{I|L}SV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[HN]{I|L}T{I|L}SV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QV]|[N{I|L}]|[RA]|[KV]}HT{I|L}SV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[HT]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[KT]Y[VS]SV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 3.3379;2.5448;2.5106;1.2925;0.55598 -;-;-;-;- 243 1 2.222 41134.0 1.0 3287 4279 7565 SUDHL4_400M_050219_1,7568 SUDHL4_400M_050219_1,7568,YALNHTLSV True True YALNHTLSV 40.193704 509.271990954876 2922868.75 7565.0 ENSG00000110777|ENST00000393067|POU2AF1 1.2795771658420565 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7569 40.197 149.0 388840.0 25 0 36642.0 + 9526 FLFGEVHKA 9 95 524.2850294903423 1046.5555060474844 2 524.2850219607353 MULTI CID FTMS 0 0 0 7565 188000.765625 0.4597337605212577 -4 0.0931777954101562 4 Unmodified _FLFGEVHKA_ ENSG00000065328|ENST00000378714|MCM10;nc|ENSG00000065328|Q7L590|MCM10 18.1463463914782 0.3454829746528889 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}DAVHKA 9 2 + 27.101 0.0 0.0 2.5895 2.5895 84.671 0.0 0.0 0.0 10.72559982972642 5.0177990538311015 5.0177990538311015 27.10077508221467 0 0.4247425010840047 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}DAVHKA 2.5895 - 102 + 1 2.222 48807.8 1.0 3288 4279 7565 SUDHL4_400M_050219_1,7569 SUDHL4_400M_050219_1,7569,FLFGEVHKA False True FLFGEVHKA 40.196686 524.285021960735 2563305.25 7565.0 ENSG00000065328|ENST00000378714|MCM10;;nc|ENSG00000065328|Q7L590|MCM10 6.233551979064941 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7570 40.199 139.0 351590.0 25 0 53938.0 + 18828 LASDNLTNI 9 92 480.7532125544877 959.4918721757754 2 480.7527953982353 MULTI CID FTMS 0 0 0 7565 162797.109375 0.7526655874550425 -3 0.0711479187011718 5 Unmodified _LASDNLTNI_ ENSG00000146263|ENST00000683635|MMS22L;ENST00000506256.5_1_6:97707503-97720651:-|nuORF;ENST00000508976.5_1_6:97702357-97730353:-|nuORF;ENST00000509383.5_1_6:97679279-97717985:-|nuORF;ENST00000511335.5_1_6:97715738-97720957:-|nuORF 13.50788311687929 0.4710407108020397 5 {I|L} 1 8 13.979 0.0 0.0 1.457 0.0 0.0 828.3966858738207 0.0 828.3966858738207 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.457 + + 113 + 1 2.222 42000.9 1.0 3289 4279 7565 SUDHL4_400M_050219_1,7570 SUDHL4_400M_050219_1,7570,LASDNLTNI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7571 40.212 732.0 151840.0 25 0 12364.0 28124 PPPIKSAV 8 185 404.7490042227319 807.4834555122638 2 404.7487060427666 MULTI CID FTMS 0 0 0 7565 105255.78125 0.7788733873026562 1 -0.030853271484375 6 Unmodified _PPPIKSAV_ ENSG00000115760|ENST00000421745|BIRC6;ENST00000471232.5_1_2:32750532-32815924:+|nuORF 4.75600775471527 0.7954636275367004 5 P 1 7 7.3172 0.0 0.0 0.90617 0.0 0.0 692.4196946863834 0.0 692.4196946863834 0.0 3.7337139306600986 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.90617 + + 24 + 1 2.222 87317.2 1.0 3290 4279 7565 SUDHL4_400M_050219_1,7571 SUDHL4_400M_050219_1,7571,PPPIKSAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7572 40.215 121.0 528910.0 25 0 111160.0 + 263 ADATRIKR 8 100 465.777174115232 0 465.7776061892509 PEAK CID FTMS 0 0 0 7565 392745.71875 0.7112471079804629 12 -0.5164222717285156 7 Unmodified _ADATRIKR_ ENSG00000105929|ENST00000310018|ATP6V0A4 5.230669730166228 0.5807325378471833 5 {I|L} 1 7 6.9897 0.0 0.0 0.75195 0.0 0.0 464.2799819201139 349.1525972955688 813.4325792156827 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.75195 + + 2 + 1 2.222 55907.7 1.0 3291 4279 7565 SUDHL4_400M_050219_1,7572 SUDHL4_400M_050219_1,7572,ADATRIKR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7574 40.219 16.0 2933700.0 25 0 608360.0 + 17018 KKGATATS 8 68 382.220068400061 762.425583866922 2 382.2197143435478 MULTI CID FTMS 0 0 0 7573 3803511.5 0.9763855821901236 1 -0.0068283081054687 1 Unmodified _KKGATATS_ REV__ENSG00000115750|ENST00000263663|TAF1B;REV__nc|ENSG00000115750|Q53T94-2|TAF1B;REV__nc|ENSG00000115750|Q53T94-3|TAF1B 0.6903765706972694 0.8201419426409876 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.222 43598.8 1.0 3292 4280 7573 SUDHL4_400M_050219_1,7574 SUDHL4_400M_050219_1,7574,KKGATATS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7575 40.222 99.0 635830.0 25 0 76117.0 + 11863 GLSPEIHTL 9 92 483.7668189225587 965.5190849119174 2 483.7666808962822 MULTI CID FTMS 0 0 0 7573 568487.9375 0.9614504722528026 1 -0.0068283081054687 2 Unmodified _GLSPEIHTL_ ENSG00000107758|ENST00000360663|PPP3CB;ENST00000495897.2_1_10:75227245-75231333:-|nuORF;nc|ENSG00000107758|P16298-2|PPP3CB;nc|ENSG00000107758|P16298-3|PPP3CB;nc|ENSG00000107758|P16298-4|PPP3CB 92.8221339359638 0.0138398038803217 5 {[VA]|[{I|L}G]}SPE{I|L}HT{I|L} 9 0 + 84.937 0.0 0.0 8.797 8.797 98.724 0.0 0.0 0.0 48.37205316164642 11.576695251796297 11.576695251796297 47.28470012691338 0 1.1861818737241734 2.0 2.004432191740108 0.0 + + {[VA]|[{I|L}G]}SPE{I|L}HT{I|L};{[VA]|[{I|L}G]}{[DS]|[MA]|[CV]|TT}{I|L}T{M(Oxidation (M))|F}T{I|L};[H{I|L}]EPT{I|L}SG{I|L};[EP]{I|L}HT{I|L}SG{I|L};[H{I|L}]TEP{I|L}SG{I|L};{[VA]|[{I|L}G]}{[DS]|[MA]|[CV]|TT}{I|L}T[{I|L}T]{M(Oxidation (M))|F};[H{I|L}]TPE{I|L}SG{I|L};[H{I|L}]ETP{I|L}SG{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}TP{M(Oxidation (M))|F}T{I|L};[HT]{I|L}EP{I|L}SG{I|L} 8.797;3.8997;3.6099;3.4355;3.1277;3.0754;3.0684;2.9453;2.8517;2.7929 +;-;-;-;-;-;-;-;-;- + 808 + 1 2.222 54777.7 1.0 3293 4280 7573 SUDHL4_400M_050219_1,7575 SUDHL4_400M_050219_1,7575,GLSPEIHTL True True GLSPEIHTL 40.221536 483.766680896282 3317665.25 7573.0 nc|ENSG00000107758|P16298-2|PPP3CB;;ENSG00000107758|ENST00000360663|PPP3CB;;ENST00000495897.2_1_10:75227245-75231333:-|nuORF;;nc|ENSG00000107758|P16298-3|PPP3CB;;nc|ENSG00000107758|P16298-4|PPP3CB 6.368761698404948 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7577 40.238 800.0 99521.0 25 0 6194.9 -1 0 113 910.4225609480326 1818.830568962865 2 910.4306518435478 MULTI CID FTMS 0 0 0 -1 0 1 5 [MN]PN{I|L}NAD 8 -1 38.109 0.0 0.0 2.0953 0.0 0.0 0.0 946.447397100256 946.447397100256 13.359790849763655 0.0 0.0 0.0 0 0.1989700043360188 1.5228787452803376 0.0 0.0 [MN]PN{I|L}NAD 2.0953 - 1997 + 1 2.222 58074.6 0.6000000238418579 3294 4281 7576 SUDHL4_400M_050219_1,7577 SUDHL4_400M_050219_1,7577, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7578 40.242 237.0 275250.0 25 0 23635.0 + 11865 GLSTEGIYRV 10 90 547.7952689593632 1093.5759849855262 2 547.7953979372978 MULTI CID FTMS 0 0 0 7576 161915.78125 0.7866621472820874 -1 0.0068283081054687 2 Unmodified _GLSTEGIYRV_ ENSG00000160007|ENST00000672722|ARHGAP35;ENST00000595822.1_1_19:47440583-47491508:+|nuORF 34.93206674587334 0.2110832994570416 5 {[VA]|[{I|L}G]}STEG{I|L}YRV 10 0 + 73.626 0.0 0.0 6.7326 6.7326 84.42 0.0 0.0 0.0 62.91238483632647 11.197887582883936 11.197887582883936 1.7609125905568137 0 0.8807196863200843 1.6989700043360187 0.0 0.3494850021680094 + + {[VA]|[{I|L}G]}STEG{I|L}YRV;{[VA]|[{I|L}G]}STEVAYRV;{[VA]|[{I|L}G]}STEG{I|L}[RV]Y;{[VA]|[{I|L}G]}STEVA[RV]Y;{[VA]|[{I|L}G]}[WM]G{I|L}YRV;{[VA]|[{I|L}G]}STEV[H{I|L}]PAA;{[VA]|[{I|L}G]}[WM]VAYRV;{[VA]|[{I|L}G]}V[WM]AYRV;{[VA]|[{I|L}G]}STEV[H{I|L}]AAP;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TW{I|L}YRV 6.7326;6.5715;5.6613;5.5002;4.2387;4.1822;4.0777;3.8024;3.6784;3.6411 +;-;-;-;-;-;-;-;-;- + 318 + 1 2.222 57027.4 1.0 3295 4281 7576 SUDHL4_400M_050219_1,7578 SUDHL4_400M_050219_1,7578,GLSTEGIYRV False True GLSTEGIYRV 40.242258 547.795397937298 1048106.125 7576.0 ENST00000595822.1_1_19:47440583-47491508:+|nuORF;;ENSG00000160007|ENST00000672722|ARHGAP35 7.343297640482585 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7579 40.256 800.0 71355.0 25 0 22092.0 -1 0 37 1159.462585994701 3475.365928584303 3 1160.132006824017 MULTI CID FTMS 0 0 0 7576 96572.421875 0.9771405796409488 2 -0.0707283020019531 3 5 C 1 -1 3.0989 0.0 0.0 0.089169 0.0 0.0 2588.945287570434 780.3787325494749 3369.324020119909 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.089169 - 3 + 1 2.222 50181.3 0.4799999892711639 3296 4281 7576 SUDHL4_400M_050219_1,7579 SUDHL4_400M_050219_1,7579, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7581 40.261 66.0 789790.0 25 0 122150.0 + 37915 TLYEAVREV 9 75 540.2896250496444 1078.5646971660888 2 540.2900878787041 MULTI CID FTMS 0 0 0 7580 471724.125 0.1866971434067062 7 -0.3967552185058594 1 Unmodified _TLYEAVREV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF 24.99096001346401 0.2132109383330889 5 [{I|L}T]YEAV{[RE]|[WV]}V 9 0 + 56.274 0.0 0.0 5.2175 5.2175 91.667 0.0 0.0 0.0 42.29428831394667 3.125338245739222 3.125338245739222 56.27368840066705 0 0.4247425010840047 2.0 0.3494850021680094 0.3807196863200844 + + [{I|L}T]YEAV{[RE]|[WV]}V 5.2175 + + 97 + 1 2.222 48984.1 1.0 3297 4282 7580 SUDHL4_400M_050219_1,7581 SUDHL4_400M_050219_1,7581,TLYEAVREV False True TLYEAVREV 40.260846 540.290087878704 41024268.0 7580.0 ENST00000490335.4_1_6:35436211-35436651:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENSG00000198755|ENST00000322203|RPL10A;;ENST00000467020.5_1_6:35436211-35436817:+|nuORF 6.931992371877034 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7582 40.275 800.0 181860.0 25 0 12271.0 + -1 LMYNWCFLAFY 11 123 772.3444828404138 1542.6744127476277 2 772.3447753787041 MULTI CID FTMS 0 0 0 7580 154908.015625 0.8172331688691622 -2 0.0414543151855468 2 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))YNWC(Carbamidomethyl (C))FLAFY_ REV__ENST00000485853.5_1_3:174577149-174974391:+|nuORF;REV__nc|ENSG00000177694|Q58DX5-2|NAALADL2 9.38312468134398 0.8308777417566128 5 {[{M(Oxidation (M))|F}H]|[RQ]}D[TA]QQAEDHQ 12 -1 52.648 0.0 0.0 3.4128 0.0 0.0 0.0 132.04578577213127 132.04578577213127 26.67911896037701 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.3252574989159953 {[{M(Oxidation (M))|F}H]|[RQ]}D[TA]QQAEDHQ 3.4128 - 3377 + 1 2.222 102492.6 0.5799999833106995 3298 4282 7580 SUDHL4_400M_050219_1,7582 SUDHL4_400M_050219_1,7582,LMYNWCFLAFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7583 40.278 188.0 479590.0 25 0 71721.0 41246 VPGKPPGV 8 129 375.72889629637007 0 375.7288696169853 PEAK CID FTMS 0 0 0 7580 236771.359375 0.9219748755306262 -1 0.0346260070800781 3 Unmodified _VPGKPPGV_ ENSG00000106829|ENST00000376552|TLE4;ENST00000462803.5_1_9:82286241-82340056:+|nuORF;nc|ENSG00000106829|Q04727-2|TLE4;nc|ENSG00000106829|Q04727-3|TLE4;nc|ENSG00000106829|Q04727-4|TLE4 6.354104778181461 0.5763711549229614 5 {I|L}AT{M(Oxidation (M))|F} 4 8 9.7556 0.0 0.0 1.3017 0.0 0.0 149.10481300114014 165.10370813541252 314.2085211365527 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 {I|L}AT{M(Oxidation (M))|F} 1.3017 - 147 + 1 2.222 71171.0 1.0 3299 4282 7580 SUDHL4_400M_050219_1,7583 SUDHL4_400M_050219_1,7583,VPGKPPGV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7584 40.292 800.0 191150.0 25 0 16774.0 + 20652 LLQEVEHQL 9 162 554.8036044626203 1107.5926559920406 2 554.8038818240166 MULTI CID FTMS 0 0 0 7580 123898.3671875 0.9588661369753056 -2 0.0414543151855468 4 Unmodified _LLQEVEHQL_ ENSG00000108395|ENST00000262294|TRIM37;ENST00000582852.1_1_17:57141714-57157166:-|nuORF;nc|ENSG00000108395|O94972-2|TRIM37;nc|ENSG00000108395|O94972-3|TRIM37 79.59630418116434 0.0176145593575188 5 {I|L}{I|L}QEVEHQ{I|L} 9 0 + 105.94 0.0 0.0 9.5647 9.5647 95.345 0.0 0.0 0.0 58.49275660196689 20.72395870587677 20.72395870587677 9.208187539523747 0 1.1039171939081172 2.0 1.174742501084005 1.8640078085766096 + + {I|L}{I|L}QEVEHQ{I|L};{I|L}{I|L}[AG]EVEHQ{I|L};{I|L}{I|L}QEVT{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F};{I|L}{I|L}QEVEH[AG]{I|L};{I|L}{I|L}QEVEHAAV;{I|L}AG{I|L}EVEHQ{I|L};{I|L}{I|L}[AG]EVT{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F};{I|L}{I|L}[AG]EVEH[AG]{I|L};{I|L}{I|L}[AG]EVEHAAV;{I|L}{I|L}Q{[CP]|[EA]}{NN|[MP]|[D{I|L}]|[EV]}PP{I|L} 9.5647;8.7333;7.681;7.4339;7.1874;7.1061;6.8497;6.223;5.9765;5.73 +;-;-;-;-;-;-;-;-;- + 4345 + 1 2.222 117488.3 0.6399999856948853 3300 4282 7580 SUDHL4_400M_050219_1,7584 SUDHL4_400M_050219_1,7584,LLQEVEHQL True True LLQEVEHQL 40.292131 554.803881824017 701460.375 7580.0 ENSG00000108395|ENST00000262294|TRIM37;;ENST00000582852.1_1_17:57141714-57157166:-|nuORF;;nc|ENSG00000108395|O94972-3|TRIM37;;nc|ENSG00000108395|O94972-2|TRIM37 7.228021462758382 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7586 40.297 3.8 16786000.0 25 0 2372700.0 + 30822 RIIDVVYNA 9 53 531.8004047140766 1061.5862564949532 2 531.8013793826103 MULTI CID FTMS 0 0 0 7585 14558122.0 0.92796412191095 1 -0.0436058044433593 1 Unmodified _RIIDVVYNA_ ENSG00000142937|ENST00000396651|RPS8 38.17557092003332 0.0854718145212029 5 [R{I|L}]{NN|[MP]|[D{I|L}]|[EV]}VVY{[QG]|[NA]} 9 0 + 35.664 0.0 0.0 3.3595 3.3595 86.237 0.0 0.0 0.0 4.198559138057767 20.95947172861458 4.198559138057767 35.664471645061376 0 0.9247425010840048 0.0 0.0 0.805462187404089 + + [R{I|L}]{NN|[MP]|[D{I|L}]|[EV]}VVY{[QG]|[NA]} 3.3595 + + 51 1 2.221 55446.5 1.0 3301 4283 7585 SUDHL4_400M_050219_1,7586 SUDHL4_400M_050219_1,7586,RIIDVVYNA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7587 40.3 174.0 487310.0 25 0 35248.0 + 16274 IVVDNVPQV 9 112 491.7818610630909 981.5491691929816 2 491.7817870974541 MULTI CID FTMS 0 0 0 7585 302065.84375 0.432834819057704 4 -0.2835159301757812 2 Unmodified _IVVDNVPQV_ ENSG00000106263|ENST00000360876|EIF3B;nc|ENSG00000106263|P55884-2|EIF3B 57.47134341890925 0.0274820932774257 5 [QA]EV{I|L}V 6 7 40.952 0.0 0.0 4.1722 0.0 0.0 0.0 339.1665564182794 339.1665564182794 15.224199400002156 0.0 0.0 0.0 0 0.5 0.6777807052660807 0.0 1.0044321917401078 [QA]EV{I|L}V 4.1722 - 377 1 2.221 68294.2 1.0 3302 4283 7585 SUDHL4_400M_050219_1,7587 SUDHL4_400M_050219_1,7587,IVVDNVPQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7588 40.303 105.0 608550.0 25 0 35979.0 + 42652 VTVPPGPSL 9 99 433.75257015636254 0 433.7526428103447 PEAK CID FTMS 0 0 0 7585 389242.5625 0.0451192146614458 21 -1.5213165283203125 3 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 64.23631603340823 0.0129441640563295 5 P[TA]PE 5 7 14.147 0.0 0.0 1.6345 0.0 0.0 299.1839862350824 68.05135523013905 367.23534146522144 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 1.4749073637206092 0.0 P[TA]PE 1.6345 - 105 + 1 2.221 52926.6 1.0 3303 4283 7585 SUDHL4_400M_050219_1,7588 SUDHL4_400M_050219_1,7588,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7589 40.305 110.0 571660.0 25 0 44303.0 + 2329 AQKGLQVDL 9 105 486.2799303051912 970.5453076771824 2 486.2801086306572 MULTI CID FTMS 0 0 0 7585 359603.0625 0.9812300590215018 1 -0.0436058044433593 4 Unmodified _AQKGLQVDL_ ENSG00000104738|ENST00000649973|MCM4 37.97399986684836 0.0865783450051559 5 [QA]VKAVV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 6 + 43.623 0.0 0.0 4.4947 4.4947 75.968 0.0 0.0 0.0 0.2713708010503239 7.147642715192504 0.2713708010503239 0.2713708010503239 0 0.4247425010840047 0.0 0.0 1.0044321917401078 [QA]VKAVV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{NN|[MP]|[D{I|L}]|[EV]}R{I|L}VV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[QA]VKVAV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QV]|[N{I|L}]|[RA]|[KV]}AKAVV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}QKAVV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QV]|[N{I|L}]|[RA]|[KV]}AKVAV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[QA][KG]{I|L}VV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}GAKAVV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}QKVAV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[VA]|[{I|L}G]}GAKVAV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.4947;4.4668;3.8571;3.5931;3.4299;2.9555;2.9269;2.8912;2.7924;2.2536 -;-;-;-;-;-;-;-;-;- 382 1 2.221 53547.0 1.0 3304 4283 7585 SUDHL4_400M_050219_1,7589 SUDHL4_400M_050219_1,7589,AQKGLQVDL True True AQKGLQVDL 40.304873 486.280108630657 1777607.375 7585.0 ENSG00000104738|ENST00000649973|MCM4 1.4164700259764988 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7590 40.307 126.0 433950.0 25 0 69586.0 8322 ERKSKEPK 8 94 501.2911205594207 1000.5676881856414 2 501.2906677126884 MULTI CID FTMS 0 0 0 7585 359531.125 0.451316593541977 -6 0.1755447387695312 5 Unmodified _ERKSKEPK_ ENSG00000169432|ENST00000642356|SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;nc|ENSG00000169432|Q15858-4|SCN9A 4.3292370932331545 0.7980541185046766 5 {I|L} 1 8 9.3323 0.0 0.0 0.9327 0.0 0.0 869.4727307655227 0.0 869.4727307655227 0.0 -0.333456986981588 -0.333456986981588 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.9327 - 31 + 1 2.221 45578.7 1.0 3305 4283 7585 SUDHL4_400M_050219_1,7590 SUDHL4_400M_050219_1,7590,ERKSKEPK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7591 40.317 530.0 249270.0 25 0 22777.0 + 44095 YIYKDTIQV 9 129 571.8079506253392 1141.6013483174784 2 571.8081542849541 MULTI CID FTMS 0 0 0 7585 174066.78125 0.4687388340656531 -2 0.0707283020019531 6 Unmodified _YIYKDTIQV_ ENSG00000183742|ENST00000400331|MACC1 81.89019881105858 0.0170587746866453 5 [Y{I|L}]Y{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 51.748 0.0 0.0 4.5329 4.5329 81.899 0.0 0.0 0.0 5.210463623643605 5.642492736872597 5.210463623643605 5.210463623643605 0 1.1307196863200843 2.0 1.110924374808178 0.0 + + [Y{I|L}]Y{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[YK]DT{I|L}Y{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}T]DKYY{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}TKYY{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[Y{I|L}]{[ES]|[DT]|[{I|L}C]}KY{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QD]|[EN]|[WG]|[KD]|[RS]}YT{I|L}Y{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}T]DYKY{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[TA]AYT{I|L}Y{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}TYKY{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[QD]|[EN]|[WG]|[KD]|[RS]}TY{I|L}Y{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 4.5329;4.0765;4.0256;3.9818;3.9211;3.912;3.3886;3.3641;3.3449;3.2997 +;-;-;-;-;-;-;-;-;- + 2564 1 2.221 99405.1 1.0 3306 4283 7585 SUDHL4_400M_050219_1,7591 SUDHL4_400M_050219_1,7591,YIYKDTIQV True True YIYKDTIQV 40.316792 571.808154284954 1963509.625 7585.0 ENSG00000183742|ENST00000400331|MACC1 5.715982278188069 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7592 40.321 252.0 292540.0 25 0 28493.0 41801 VPVSEPVP 8 120 412.23068911483887 822.4468252964778 2 412.2308227419853 MULTI CID FTMS 0 0 0 7585 115109.8125 0.2386346586257857 15 -0.9026603698730468 7 Unmodified _VPVSEPVP_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 2.889219685676258 0.8067950007271085 5 G[VP] 3 6 8.072 0.0 0.0 0.98146 0.0 0.0 551.2922365287028 0.0 551.2922365287028 0.0 3.4678748622465623 0.0 0.0 0 0.0 0.0 0.0 0.0 G[VP] 0.98146 - 42 + 1 2.221 62147.8 1.0 3307 4283 7585 SUDHL4_400M_050219_1,7592 SUDHL4_400M_050219_1,7592,VPVSEPVP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7593 40.324 119.0 439310.0 25 0 68928.0 22901 LSDGIAMLVA 10 90 495.2698130263692 0 495.2687255740166 PEAK CID FTMS 0 0 0 7585 117353.125 0.3441609983922412 -2 0.0707283020019531 8 Unmodified _LSDGIAMLVA_ ENSG00000138100|ENST00000380075|TRIM54;nc|ENSG00000138100|Q9BYV2-2|TRIM54 14.838274106304384 0.3381107837965078 5 M{I|L}T 3 8 12.039 0.0 0.0 1.2179 0.0 0.0 188.11680103570345 452.22702966861567 640.3438307043191 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 M{I|L}T 1.2179 - 102 + 1 2.221 46722.0 1.0 3308 4283 7585 SUDHL4_400M_050219_1,7593 SUDHL4_400M_050219_1,7593,LSDGIAMLVA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7594 40.326 118.0 475890.0 25 0 51967.0 + 34515 SNNVRLQI 8 76 472.27039470913707 942.5262364850742 2 472.2732116580009 MULTI CID FTMS 0 0 0 7585 335487.625 0.3218542028226359 -9 0.2466545104980468 9 Unmodified _SNNVRLQI_ REV__ENSG00000112365|ENST00000230122|ZBTB24;REV__nc|ENSG00000112365|O43167-2|ZBTB24 2.577480529830294 0.808687252328423 5 {I|L} 1 -1 10.0 0.0 0.0 1.061 0.0 0.0 811.431172253432 0.0 811.431172253432 0.0 8.89075625191822 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.061 + + 2 + 1 2.221 51161.6 1.0 3309 4283 7585 SUDHL4_400M_050219_1,7594 SUDHL4_400M_050219_1,7594,SNNVRLQI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7595 40.33 210.0 336230.0 25 0 59534.0 11384 GGGRNPPTK 9 105 442.241499634203 882.4684463352061 2 442.2433349490166 MULTI CID FTMS 0 0 0 7585 136155.609375 0.7783601462723707 17 -1.1000518798828125 10 Unmodified _GGGRNPPTK_ ENST00000608501.5_1_2:91816838-91843483:-|nuORF 3.5964929083625545 0.7891324200061827 5 A 1 9 9.6041 0.0 0.0 1.0883 0.0 0.0 793.4200892568842 0.0 793.4200892568842 0.0 0.5697167615341847 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.0883 - 17 + 1 2.221 61011.8 1.0 3310 4283 7585 SUDHL4_400M_050219_1,7595 SUDHL4_400M_050219_1,7595,GGGRNPPTK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7596 40.336 295.0 383540.0 25 0 42985.0 + 45595 YVGPSLRM 8 115 461.7435106906945 0 461.7439147830009 PEAK CID FTMS 0 0 0 7585 111107.0703125 0.3227027476183444 -2 0.0707283020019531 11 Unmodified _YVGPSLRM_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 36.12702656103203 0.1753113530223663 5 VGP[RD]V 6 4 24.698 0.0 0.0 2.6803 0.0 0.0 163.06208134057027 132.0458162897094 295.1078976302797 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.4247425010840047 VGP[RD]V 2.6803 - 180 + 1 2.221 90431.2 1.0 3311 4283 7585 SUDHL4_400M_050219_1,7596 SUDHL4_400M_050219_1,7596,YVGPSLRM False True YVGPSLRM 40.335775 461.743914783001 1792711.625 7585.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 5.978685855865479 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7598 40.341 69.0 923480.0 25 0 138540.0 + 17494 KPGPPITA 8 91 390.7332917182137 779.4520305032274 2 390.7328063845634 MULTI CID FTMS 0 0 0 7597 688008.3125 0.400665756638385 3 -0.2399101257324218 1 Unmodified _KPGPPITA_ REV__ENSG00000196632|ENST00000354646|WNK3;REV__nc|ENSG00000196632|Q9BYP7-2|WNK3;REV__nc|ENSG00000196632|Q9BYP7-3|WNK3;REV__nc|ENSG00000196632|Q9BYP7-4|WNK3 2.302733041254933 0.8103549651115762 5 S 1 -1 6.2591 0.0 0.0 0.80301 0.0 0.0 389.2340872432649 300.1601961725219 689.3942834157868 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 S 0.80301 - 3 + 1 2.221 55144.5 1.0 3312 4284 7597 SUDHL4_400M_050219_1,7598 SUDHL4_400M_050219_1,7598,KPGPPITA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7599 40.35 553.0 178700.0 25 0 15261.0 -1 TINLCCKF 8 146 528.2545701673204 1054.4945874014406 2 528.7607910037041 MULTI CID FTMS 0 0 0 7597 62231.00390625 0.0550510407325129 15 -0.94549560546875 2 2 Carbamidomethyl (C) _TINLC(Carbamidomethyl (C))C(Carbamidomethyl (C))KF_ ENST00000281830.3_1_2:223916785-223916857:+|nuORF 13.50788311687929 0.7113601687236069 5 [{I|L}T]N[CS]P{I|L}N{[HG]|PP} 10 -1 + 39.234 0.0 0.0 3.7207 3.7207 82.022 0.0 0.0 0.0 15.624594574447627 0.7918124604762511 0.7918124604762511 8.981518597060333 0 0.0 1.5228787452803376 1.3882104921644451 0.0 [{I|L}T]N[CS]P{I|L}N{[HG]|PP};[{I|L}T]N[CS]P{[HG]|PP}AR;[{I|L}T]GG[CS]P{I|L}N{[HG]|PP};[{I|L}T]N[CS]P{I|L}GG{[HG]|PP};[Q{I|L}]S[CS]P{I|L}N{[HG]|PP};[YE][EP]P{I|L}N{[HG]|PP};{[QV]|[N{I|L}]|[RA]|[KV]}T[CS]P{I|L}N{[HG]|PP};[{I|L}T]N[CS][YK]AR;[YE][HV]S{I|L}N{[HG]|PP};{[WN]|[YH]}{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}N{[HG]|PP} 3.7207;2.8689;2.8516;2.8516;2.239;2.1325;2.1313;1.8467;1.7402;1.5615 -;-;-;-;-;-;-;-;-;- 1078 1 2.221 81147.7 1.0 3313 4284 7597 SUDHL4_400M_050219_1,7599 SUDHL4_400M_050219_1,7599,TINLCCKF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7600 40.352 52.0 1514100.0 25 0 289740.0 + 28095 PPLAALAA 8 96 362.2222113975729 722.4298698619458 2 362.2220031619072 MULTI CID FTMS 0 0 0 7597 1018324.5 0.0810409875445951 -2 0.0797080993652343 3 Unmodified _PPLAALAA_ REV__ENSG00000150281|ENST00000279804|CTF1;REV__nc|ENSG00000150281|Q16619-2|CTF1 0.7936320650641473 0.8195151834710337 5 A 1 -1 3.9794 0.0 0.0 0.55084 0.0 0.0 361.195752285577 287.1658114068969 648.361563692474 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.55084 + + 4 + 1 2.221 68864.8 1.0 3314 4284 7597 SUDHL4_400M_050219_1,7600 SUDHL4_400M_050219_1,7600,PPLAALAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7601 40.356 225.0 372280.0 25 0 34804.0 + -1 VLCSCCQI 8 122 491.70948930685387 981.4044256805078 2 491.7095825076103 MULTI CID FTMS 0 0 0 7597 212590.09375 0.8567297321939963 3 -0.2399101257324218 4 2 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))SC(Carbamidomethyl (C))CQI_ REV__ENSG00000164402|ENST00000378719|SEPTIN8 15.768221252438446 0.6779680726941459 5 [QA]EV{I|L}V 6 -1 28.835 0.0 0.0 2.9381 0.0 0.0 0.0 339.02420373841966 339.02420373841966 12.60521762079926 0.0 0.0 0.0 0 0.5 0.6989700043360187 0.0 0.4247425010840047 [QA]EV{I|L}V 2.9381 - 301 1 2.221 71826.5 1.0 3315 4284 7597 SUDHL4_400M_050219_1,7601 SUDHL4_400M_050219_1,7601,VLCSCCQI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7602 40.358 113.0 352970.0 25 0 13671.0 24023 LVYMSQNQV 9 82 541.2702086245408 1080.5258643158816 2 541.2709228396416 MULTI CID FTMS 0 0 0 7597 180110.953125 0.1595259092606532 13 -0.7850723266601562 5 Unmodified _LVYMSQNQV_ ENST00000505150.5_1_4:169411574-169413987:-|nuORF 15.847184025352805 0.4077185912009129 5 [{I|L}T]CKE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[HG]|PP} 9 8 + 45.556 0.0 0.0 4.2161 4.2161 81.538 0.0 0.0 0.0 6.194028404633151 4.137342758552691 4.137342758552691 6.194028404633151 0 0.0 2.0 0.3494850021680094 0.0 [{I|L}T]CKE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[HG]|PP};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[KG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[HG]|PP};{[QN]|[E{I|L}]|[KN]}[RP]EP{M(Oxidation (M))|F}{[HG]|PP};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YV]EKCPV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[KG][YV][EP];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]KM[PA];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]KCPV;[VS]MKE{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[HG]|PP};{[QS]|[NT]}[YK]EKCPV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[{M(Oxidation (M))|F}V]{[NV]|[RG]}DV 4.2161;3.6429;2.9996;2.9305;2.4648;2.306;2.1903;2.16;2.1403;2.0274 -;-;-;-;-;-;-;-;-;- 226 1 2.221 34747.3 1.0 3316 4284 7597 SUDHL4_400M_050219_1,7602 SUDHL4_400M_050219_1,7602,LVYMSQNQV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7603 40.362 170.0 263520.0 25 0 29703.0 + 1739 ALQERLDGL 9 82 507.7828595877755 1013.551166242351 2 507.7826721072197 MULTI CID FTMS 0 0 0 7597 167244.109375 0.5918969527735419 2 -0.1851768493652343 6 Unmodified _ALQERLDGL_ ENSG00000187109|ENST00000618691|NAP1L1;nc|ENSG00000187109|P55209-2|NAP1L1;nc|ENSG00000187109|P55209-3|NAP1L1 39.94969957227396 0.0757326808254658 5 [{I|L}A]QE 4 5 46.682 0.0 0.0 4.6058 0.0 0.0 0.0 569.3096407525999 569.3096407525999 34.463950151760656 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.3494850021680094 + [{I|L}A]QE 4.6058 + + 57 + 1 2.221 41716.9 1.0 3317 4284 7597 SUDHL4_400M_050219_1,7603 SUDHL4_400M_050219_1,7603,ALQERLDGL True True ALQERLDGL 40.361551 507.78267210722 1465767.875 7597.0 ENSG00000187109|ENST00000618691|NAP1L1;;nc|ENSG00000187109|P55209-3|NAP1L1;;nc|ENSG00000187109|P55209-2|NAP1L1 4.167072931925456 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7604 40.366 234.0 489690.0 25 0 37132.0 27519 PKPAGGAI 8 119 355.71192217744186 0 355.7118102908134 PEAK CID FTMS 0 0 0 7597 228535.203125 0.6439076585649112 -1 0.0436058044433593 7 Unmodified _PKPAGGAI_ ENSG00000188878|ENST00000636174|FBF1;ENST00000585990.5_1_17:73916156-73934230:-|nuORF;nc|ENSG00000188878|Q8TES7-2|FBF1;nc|ENSG00000188878|Q8TES7-3|FBF1;nc|ENSG00000188878|Q8TES7-4|FBF1;nc|ENSG00000188878|Q8TES7-5|FBF1;nc|ENSG00000188878|Q8TES7|FBF1 0.0 0.6010389664953673 5 R 1 8 9.5205 0.0 0.0 1.342 0.0 0.0 355.19378668340124 195.09530054263908 550.2890872260404 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.3054621874040891 R 1.342 - 1 + 1 2.221 95113.5 1.0 3318 4284 7597 SUDHL4_400M_050219_1,7604 SUDHL4_400M_050219_1,7604,PKPAGGAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7605 40.369 181.0 364510.0 25 0 44802.0 20724 LLSFFLAF 8 106 479.2772729471975 956.539992961195 2 479.2780639529228 MULTI CID FTMS 0 0 0 7597 190424.328125 0.1075419645629834 -10 0.2902603149414062 8 Unmodified _LLSFFLAF_ ENST00000269919.10_1_19:18474859-18475003:+|nuORF 5.760428011301431 0.7893668129297577 5 {M(Oxidation (M))|F} 1 7 12.474 0.0 0.0 1.3041 0.0 0.0 791.4607673525998 0.0 791.4607673525998 0.0 2.095646538709879 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.3041 + + 31 + 1 2.221 53757.1 1.0 3319 4284 7597 SUDHL4_400M_050219_1,7605 SUDHL4_400M_050219_1,7605,LLSFFLAF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7606 40.383 800.0 144630.0 25 0 6173.1 -1 0 140 917.4306871341378 1832.846821335076 2 917.9277221560478 MULTI CID FTMS 0 0 0 7597 114707.1328125 0.070523922077449 -9 0.2451934814453125 9 5 [{I|L}P]SYS{I|L}{[SA]|[TG]}VCED{I|L}NP[EP] 17 -1 + 76.513 0.0 0.0 4.1745 4.1745 76.681 0.0 0.0 0.0 12.21848749616356 7.695510786217255 7.695510786217255 1.637867533881348 0 0.0 0.8538719643217619 1.203119819790884 0.4247425010840047 [{I|L}P]SYS{I|L}{[SA]|[TG]}VCED{I|L}NP[EP];[{I|L}P]SY{I|L}S{[SA]|[TG]}VCED{I|L}NP[EP];[{I|L}P]YSS{I|L}{[SA]|[TG]}VCED{I|L}NP[EP];[{I|L}P]YS{I|L}S{[SA]|[TG]}VCED{I|L}NP[EP];[{I|L}P]SYS{I|L}{[SA]|[TG]}MAED{I|L}NP[EP];[{I|L}P]S{[TV]|[{I|L}S]}Y{[SA]|[TG]}VCED{I|L}NP[EP];[{I|L}P]SY{I|L}S{[SA]|[TG]}MAED{I|L}NP[EP];[{I|L}P]YSS{I|L}{[SA]|[TG]}MAED{I|L}NP[EP];[{I|L}P]YS{I|L}S{[SA]|[TG]}MAED{I|L}NP[EP];[{I|L}P]SY{I|L}G{[MG]|[TS]}VCED{I|L}NP[EP] 4.1745;4.0852;4.0438;3.9544;3.846;3.8183;3.7567;3.7153;3.6259;3.5931 -;-;-;-;-;-;-;-;-;- 14218 1 2.221 80571.5 0.6399999856948853 3320 4284 7597 SUDHL4_400M_050219_1,7606 SUDHL4_400M_050219_1,7606, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7607 40.397 800.0 165570.0 25 0 13272.0 + -1 SVSEPNVSF 9 109 965.4713432738636 0 965.4521362185478 PEAK CID FTMS 0 0 0 -1 0 10 ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 5 VGYVCVT 7 -1 40.035 0.0 0.0 2.0755 0.0 0.0 982.4746556865956 222.0889834039672 1204.563639090563 0.0 0.0 0.0 0.0 0 0.0 0.0 2.5400990676322905 0.0 VGYVCVT 2.0755 - 5230 + 1 2.221 91910.4 0.6200000047683716 3321 4284 7597 SUDHL4_400M_050219_1,7607 SUDHL4_400M_050219_1,7607, False False SVSEPNVSF 40.397124 965.452136218548 1385852.875 7597.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 4.852954864501953 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7608 40.411 800.0 148730.0 25 0 10601.0 + -1 RRCMAVFCSFY 11 119 756.8287167393945 1511.642880545589 2 756.8288452029228 MULTI CID FTMS 0 0 0 7597 100488.734375 0.1709236439520743 -9 0.2451934814453125 11 2 Carbamidomethyl (C),Oxidation (M) _RRC(Carbamidomethyl (C))M(Oxidation (M))AVFC(Carbamidomethyl (C))SFY_ REV__ENSG00000171316|ENST00000423902|CHD7 2.9952420565917617 0.861016188266951 5 ANQQA{[C(Carbamidomethyl (C))G]|[NC]}V{M(Oxidation (M))|F}Y 10 -1 55.667 0.0 0.0 3.6825 0.0 0.0 355.1548508762267 0.0 355.1548508762267 0.0 36.26918465971855 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.805462187404089 ANQQA{[C(Carbamidomethyl (C))G]|[NC]}V{M(Oxidation (M))|F}Y 3.6825 - 2017 + 1 2.221 87056.5 0.6200000047683716 3322 4284 7597 SUDHL4_400M_050219_1,7608 SUDHL4_400M_050219_1,7608,RRCMAVFCSFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7610 40.416 68.0 838530.0 25 0 159180.0 + 29377 QKTVMIPP 8 92 457.2639520411654 912.5133511491308 2 457.2642700076103 MULTI CID FTMS 0 0 0 7609 743097.75 0.5217191896407781 19 -1.4025039672851562 1 Unmodified _QKTVMIPP_ REV__ENSG00000196091|ENST00000361466|MYBPC1;REV__nc|ENSG00000196091|Q00872-10|MYBPC1;REV__nc|ENSG00000196091|Q00872-2|MYBPC1;REV__nc|ENSG00000196091|Q00872-3|MYBPC1;REV__nc|ENSG00000196091|Q00872-5|MYBPC1;REV__nc|ENSG00000196091|Q00872-6|MYBPC1;REV__nc|ENSG00000196091|Q00872-7|MYBPC1;REV__nc|ENSG00000196091|Q00872-8|MYBPC1;REV__nc|ENSG00000196091|Q00872-9|MYBPC1;REV__nc|ENSG00000196091|Q00872|MYBPC1 5.230669730166228 0.792582437072536 5 R 1 -1 3.9794 0.0 0.0 0.43609 0.0 0.0 474.2519813754964 279.1445711725219 753.3965525480183 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.43609 - 3 + 1 2.221 52619.6 1.0 3323 4285 7609 SUDHL4_400M_050219_1,7610 SUDHL4_400M_050219_1,7610,QKTVMIPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7611 40.418 100.0 403480.0 25 0 75852.0 + 31232 RLSEAIVTV 9 67 494.2955559648979 986.5765589965958 2 494.2956725955009 MULTI CID FTMS 0 0 0 7609 183238.265625 0.2049432979529523 4 -0.2418403625488281 2 Unmodified _RLSEAIVTV_ ENSG00000159596|ENST00000372025|TMEM69 13.042465956692816 0.4836390050082244 5 {I|L}VTV 4 5 23.386 0.0 0.0 2.3704 0.0 0.0 556.2990589826187 0.0 556.2990589826187 0.0 0.6217390965178282 0.0 0.0 0 0.718765315847925 0.0 0.0 0.0 + {I|L}VTV 2.3704 + + 51 1 2.221 38085.3 1.0 3324 4285 7609 SUDHL4_400M_050219_1,7611 SUDHL4_400M_050219_1,7611,RLSEAIVTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7612 40.422 205.0 320910.0 25 0 104730.0 27214 PGKVLVPL 8 81 411.7747406203271 821.5349283074543 2 411.7742797732353 MULTI CID FTMS 0 0 0 7609 314441.09375 0.4614734603051138 -1 0.0752067565917968 3 Unmodified _PGKVLVPL_ ENSG00000079432|ENST00000681038|CIC;nc|ENSG00000079432|Q96RK0-2|CIC 0.6903765706972694 0.8201419426409876 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.221 59489.3 1.0 3325 4285 7609 SUDHL4_400M_050219_1,7612 SUDHL4_400M_050219_1,7612,PGKVLVPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7613 40.424 128.0 305610.0 25 0 21131.0 + -1 LAKPASKMV 9 89 480.7823665362282 959.5501801392564 2 480.7825195193291 MULTI CID FTMS 0 0 0 7609 275311.34375 0.2649185078981229 -8 0.2943572998046875 4 Oxidation (M) _LAKPASKM(Oxidation (M))V_ REV__nc|ENSG00000267908|P0CG00|ZSCAN5DP 7.910154910731844 0.6385446671287552 5 {I|L} 1 -1 11.109 0.0 0.0 1.1578 0.0 0.0 828.4553295306612 0.0 828.4553295306612 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1578 + + 21 + 1 2.221 39409.4 1.0 3326 4285 7609 SUDHL4_400M_050219_1,7613 SUDHL4_400M_050219_1,7613,LAKPASKMV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7614 40.429 272.0 367150.0 25 0 36408.0 + 1540 ALKPDLVNV 9 125 484.7928999678416 967.5712470024832 2 484.7919494509697 MULTI CID FTMS 0 0 0 7609 251697.390625 0.3439624911984251 -2 0.1188125610351562 5 Unmodified _ALKPDLVNV_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 51.629811660486645 0.0367964933207742 5 [{I|L}P]DKA{I|L}VNV 9 4 + 52.392 0.0 0.0 5.4148 5.4148 81.961 0.0 0.0 0.0 2.627980414712312 13.46787486224656 2.627980414712312 2.627980414712312 0 0.5 0.958607314841775 0.6694451763165201 0.0 [{I|L}P]DKA{I|L}VNV;[{I|L}A]P[TA]A{I|L}VNV;[{I|L}A][TA]PA{I|L}VNV;[DP]{I|L}KA{I|L}VNV;[{I|L}A]K[DP]{I|L}VNV;[{I|L}P]DVK[{I|L}A]NV;[{I|L}A]KV[EP]VNV;[PA]{I|L}[TA]A{I|L}VNV;[{I|L}P]DKA{I|L}VGGV;[PA]V[VS]A{I|L}VNV 5.4148;5.1432;4.9922;4.9046;4.7792;4.7341;4.6791;4.657;4.4631;4.3931 -;-;-;-;+;-;-;-;-;- + 2466 1 2.221 82315.5 1.0 3327 4285 7609 SUDHL4_400M_050219_1,7614 SUDHL4_400M_050219_1,7614,ALKPDLVNV True True ALKPDLVNV 40.429428 484.79194945097 5296910.5 7609.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1;;ENST00000493342.1_1_X:24745055-24752029:+|nuORF 6.794674078623454 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7615 40.436 364.0 318520.0 25 0 43496.0 19503 LFLPLYVY 8 146 514.2980350864258 1026.5815172396517 2 514.2952758669853 MULTI CID FTMS 0 0 0 7609 139384.46875 0.0633215124170445 -9 0.298370361328125 6 Unmodified _LFLPLYVY_ ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A 32.45364647766026 0.3613649037604678 5 [{I|L}A]VAKS{I|L}YY 9 6 + 52.805 0.0 0.0 5.1438 5.1438 81.785 0.0 0.0 0.0 3.284759625220908 16.478174818886373 3.284759625220908 3.284759625220908 0 0.5 0.744727494896694 0.6747425010840047 0.0 [{I|L}A]VAKS{I|L}YY;{[TV]|[{I|L}S]}KA{I|L}G{I|L}YY;[{I|L}A]VKAS{I|L}YY;{[TV]|[{I|L}S]}KAVA{I|L}YY;{[TV]|[{I|L}S]}KAAV{I|L}YY;{[VA]|[{I|L}G]}{I|L}AKS{I|L}YY;[{I|L}A]VKTG{I|L}YY;[{I|L}A]VAKTVYY;[{I|L}A]VKSA{I|L}YY;[{I|L}A][KS]{I|L}G{I|L}YY 5.1438;4.8238;4.7853;4.7586;4.7021;4.6997;4.6138;4.607;4.5486;4.3864 -;-;-;-;-;-;-;-;-;- 1407 1 2.221 92121.6 1.0 3328 4285 7609 SUDHL4_400M_050219_1,7615 SUDHL4_400M_050219_1,7615,LFLPLYVY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7616 40.45 783.0 202510.0 25 0 24920.0 + 27491 PKGVLALA 8 191 384.7509875062938 767.4874220793877 2 384.7511169314384 MULTI CID FTMS 0 0 0 7609 123576.234375 0.4004134411771049 -1 0.0752067565917968 7 Unmodified _PKGVLALA_ REV__ENSG00000179869|ENST00000435803|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-3|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-4|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-5|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-6|ABCA13;REV__nc|ENSG00000179869|Q86UQ4-7|ABCA13;REV__nc|ENSG00000179869|Q86UQ4|ABCA13 0.0 0.8243325171867699 5 P 1 -1 9.3971 0.0 0.0 1.2244 0.0 0.0 652.4234323716713 0.0 652.4234323716713 0.0 1.1483704356415636 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.2244 + + 16 + 1 2.221 123708.9 1.0 3329 4285 7609 SUDHL4_400M_050219_1,7616 SUDHL4_400M_050219_1,7616,PKGVLALA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7617 40.463 800.0 122690.0 25 0 11156.0 13241 HIALGTESELQ 11 107 599.3081893084053 0 599.3091918826103 PEAK CID FTMS 0 0 0 7609 105287.765625 0.5322066593746176 -3 0.1549148559570312 8 Unmodified _HIALGTESELQ_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 13.90604991867851 0.4141907700618076 5 EEQ 3 8 11.669 0.0 0.0 0.97517 0.0 0.0 77.07791005879388 730.3619478815061 807.4398579403 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 EEQ 0.97517 - 257 + 1 2.221 83153.6 0.5899999737739563 3330 4285 7609 SUDHL4_400M_050219_1,7617 SUDHL4_400M_050219_1,7617,HIALGTESELQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7618 40.469 304.0 188020.0 25 0 17373.0 + -1 LSCGPRRML 9 102 545.2858221078687 1088.5570912825374 2 545.2860595583916 MULTI CID FTMS 0 0 0 7609 102055.1015625 0.1236444691212844 4 -0.2418403625488281 9 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))GPRRML_ REV__ENSG00000284484|ENST00000640173|CPHXL2 11.640296217721598 0.521594087909532 5 [YV]M 3 -1 33.2 0.0 0.0 3.0499 0.0 0.0 0.0 692.3606661432249 692.3606661432249 18.138181262758263 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [YV]M 3.0499 - 156 + 1 2.221 48863.9 1.0 3331 4285 7609 SUDHL4_400M_050219_1,7618 SUDHL4_400M_050219_1,7618,LSCGPRRML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7619 40.483 800.0 138230.0 25 0 11818.0 + 32087 RVLPPSALQSV 11 119 583.8479252155811 1165.681297497962 2 583.8483764529228 MULTI CID FTMS 0 0 0 7609 89112.078125 0.2191432561678905 20 -1.5076942443847656 10 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 62.86856922530385 0.057503257068159 5 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 65.014 0.0 0.0 5.5773 5.5773 87.777 0.0 0.0 0.0 3.1420954521829003 44.563481942563655 3.1420954521829003 9.128498242810991 0 1.5189301784845295 0.0 0.805462187404089 0.0 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[VP][R{I|L}][PS]A{I|L}QSV;[{I|L}A]P[PS][RV]{I|L}QSV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[RV]{I|L}P[PS]RRW;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV;[{I|L}A]P[{I|L}A]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[VP][R{I|L}]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV 5.5773;4.7942;3.8899;2.8732;2.5605;2.1907;1.7743;0.9374;0.8731 +;-;-;-;-;-;-;-;- + 223 1 2.221 88626.3 0.550000011920929 3332 4285 7609 SUDHL4_400M_050219_1,7619 SUDHL4_400M_050219_1,7619,RVLPPSALQSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7620 40.498 800.0 130180.0 25 0 15066.0 + -1 AVSACCLCCL 10 157 578.7328551713122 0 578.7324096560478 PEAK CID FTMS 0 0 0 7609 89508.875 0.9823570527546142 -1 0.0752067565917968 11 3 Carbamidomethyl (C) _AVSAC(Carbamidomethyl (C))C(Carbamidomethyl (C))LC(Carbamidomethyl (C))CL_ REV__ENSG00000140873|ENST00000282849|ADAMTS18;REV__nc|ENSG00000140873|Q8TE60-2|ADAMTS18 10.073929032068715 0.3742530088597855 5 VEAE 4 -1 21.771 0.0 0.0 1.8842 0.0 0.0 71.04473758696174 653.2185152643186 724.2632528512804 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 VEAE 1.8842 - 232 + 1 2.221 79840.6 0.550000011920929 3333 4285 7609 SUDHL4_400M_050219_1,7620 SUDHL4_400M_050219_1,7620,AVSACCLCCL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7621 40.502 211.0 354780.0 25 0 52708.0 + 31093 RLLEEIHAM 9 85 556.2997503356853 1110.5849477381705 2 556.2993041872978 MULTI CID FTMS 0 0 0 7609 94415.40625 0.5472730791758154 -1 0.0752067565917968 12 Unmodified _RLLEEIHAM_ ENSG00000151304|ENST00000339397|SRFBP1 24.99096001346401 0.2132109383330889 5 E{I|L}HAM 5 4 46.592 0.0 0.0 4.1953 0.0 0.0 511.31102187324376 0.0 511.31102187324376 0.0 24.373956018581858 0.0 0.0 0 1.1643943297944483 0.0 0.0 0.0 + E{I|L}HAM 4.1953 + + 84 1 2.221 63879.3 1.0 3334 4285 7609 SUDHL4_400M_050219_1,7621 SUDHL4_400M_050219_1,7621,RLLEEIHAM False True RLLEEIHAM 40.501786 556.299304187298 1008543.5625 7609.0 ENSG00000151304|ENST00000339397|SRFBP1 5.888030846913655 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7622 40.507 300.0 247430.0 25 0 24478.0 18679 LAISRGPLA 9 103 449.278861451574 896.543169969948 2 449.2785217165947 MULTI CID FTMS 0 0 0 7609 132112.5625 1.0 0 0.0 13 Unmodified _LAISRGPLA_ ENST00000557624.1_1_14:24808148-24809140:-|nuORF 21.74664581756881 0.2544899275067181 5 [{I|L}A]{I|L} 3 6 34.705 0.0 0.0 3.871 0.0 0.0 0.0 596.3159920750804 596.3159920750804 22.715299873086607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}A]{I|L} 3.871 + + 108 + 1 2.221 63860.9 1.0 3335 4285 7609 SUDHL4_400M_050219_1,7622 SUDHL4_400M_050219_1,7622,LAISRGPLA False True ALLGRIPSA 40.50727 449.278521716595 609144.5625 7609.0 ENSG00000110955|ENST00000262030|ATP5F1B;;ENST00000411980.1_1_2:98823421-98823919:+|nuORF 1.8207731395959852 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7623 40.521 800.0 127540.0 25 0 11839.0 -1 0 111 603.9679561883057 1808.882039165117 3 604.2952758669853 MULTI CID FTMS 0 0 0 7609 104492.265625 0.0388731371018452 22 -1.5822677612304688 14 5 {I|L}Q 2 -1 22.831 0.0 0.0 1.2622 0.0 0.0 1549.729133175216 0.0 1549.729133175216 0.0 -0.1644446525852672 -0.1644446525852672 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}Q 1.2622 - 270 + 1 2.221 80274.0 0.5299999713897705 3336 4285 7609 SUDHL4_400M_050219_1,7623 SUDHL4_400M_050219_1,7623, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7625 40.527 114.0 501320.0 25 0 68651.0 + 39244 VAAFAALT 8 112 382.220068400061 762.425583866922 2 382.2194091677666 MULTI CID FTMS 0 0 0 7624 439544.375 0.1128338353867916 7 -0.2798805236816406 1 Unmodified _VAAFAALT_ REV__ENSG00000117600|ENST00000370185|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-3|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5|PLPPR4 0.0 0.8243325171867699 5 V 1 -1 1.5938 0.0 0.0 0.20904 0.0 0.0 399.2229542053065 261.1125887506469 660.3355429559533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.20904 + + 1 + 1 2.221 48298.4 1.0 3337 4286 7624 SUDHL4_400M_050219_1,7625 SUDHL4_400M_050219_1,7625,VAAFAALT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7626 40.529 100.0 696200.0 25 0 92423.0 + 12968 HAIPPTLAM 9 92 475.7597802154014 949.5050074976028 2 475.7599365115166 MULTI CID FTMS 0 0 0 7624 511885.875 0.3726651251368343 35 -2.0538101196289062 2 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 5 [{I|L}A]HP[TP]{I|L}AM 9 2 + 38.835 0.0 0.0 4.09 4.09 79.373 0.0 0.0 0.0 3.979400086720375 9.259318801184982 3.979400086720375 3.979400086720375 0 0.8935078169319297 0.7958800173440752 0.8807196863200843 0.0 [{I|L}A]HP[TP]{I|L}AM;[HA]{I|L}P[TP]{I|L}AM;[YG]{I|L}[TP]PR{M(Oxidation (M))|F};[YG]{I|L}[TP][R{I|L}]M;[YG]{I|L}[TP]{[WT]|[RM]}{I|L};[HT]{I|L}[HS]RS{I|L};[HT][RH]PR{M(Oxidation (M))|F};[HT][RH][R{I|L}]M 4.09;3.6709;3.1148;2.8912;1.6231;0.82168;0.80015;0.57656 -;+;-;-;-;-;-;- + 195 1 2.221 58344.1 1.0 3338 4286 7624 SUDHL4_400M_050219_1,7626 SUDHL4_400M_050219_1,7626,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7627 40.53 24.0 2978900.0 25 0 140110.0 -1 0 68 910.4225609480326 1818.830568962865 2 910.4238159060478 MULTI CID FTMS 0 0 0 7624 2875060.25 0.7676092889190111 -2 0.1851768493652343 3 5 [MN]PN{I|L}NADQ[{I|L}T]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[QS]|[NT]} 16 -1 + 78.22 0.0 0.0 4.3006 4.3006 82.247 0.0 0.0 0.0 52.50685020462235 1.783343794609138 1.783343794609138 6.709412807357751 0 1.4916440611282624 1.5228787452803376 0.3494850021680094 1.1549471895720984 [MN]PN{I|L}NADQ[{I|L}T]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[QS]|[NT]};[MN]PN{I|L}NWQ[{I|L}T]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[QS]|[NT]};[MN]PN{I|L}NW[WR]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[QS]|[NT]} 4.3006;3.9317;3.5639 -;-;- 585 + 1 2.221 54558.5 1.0 3339 4286 7624 SUDHL4_400M_050219_1,7627 SUDHL4_400M_050219_1,7627, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7628 40.532 92.0 592960.0 25 0 47749.0 + 14119 IAVEPGNQW 9 103 507.2555572856372 1012.4965616380744 2 507.2558776736259 MULTI CID FTMS 0 0 0 7624 357068.09375 0.4316362178893901 -3 0.2287826538085937 4 Unmodified _IAVEPGNQW_ ENSG00000171566|ENST00000499023|PLRG1;ENST00000506918.1_1_4:155463230-155466996:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1 38.15118350030904 0.0856056900103839 5 [{I|L}A]VE 4 5 31.031 0.0 0.0 3.0648 0.0 0.0 0.0 597.24107392739 597.24107392739 16.42667503568731 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + [{I|L}A]VE 3.0648 + + 263 1 2.221 46080.4 1.0 3340 4286 7624 SUDHL4_400M_050219_1,7628 SUDHL4_400M_050219_1,7628,IAVEPGNQW True True IAVEPGNQW 40.53204 507.255877673626 3692307.25 7624.0 ENSG00000171566|ENST00000499023|PLRG1;;nc|ENSG00000171566|O43660-2|PLRG1;;ENST00000506918.1_1_4:155463230-155466996:-|nuORF 6.622909228006999 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7629 40.536 192.0 416600.0 25 0 44142.0 16789 KGKGLIAA 8 124 379.2486068069189 756.4826606806378 2 379.2484619021416 MULTI CID FTMS 0 0 0 7624 313836.0625 1.0 0 0.0 5 Unmodified _KGKGLIAA_ ENST00000586783.5_1_19:14000644-14000983:-|nuORF 0.0 0.8243325171867699 5 P 1 8 11.783 0.0 0.0 1.5576 0.0 0.0 641.4189074841519 0.0 641.4189074841519 0.0 1.4087211006796867 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.5576 - 16 + 1 2.221 71126.3 1.0 3341 4286 7624 SUDHL4_400M_050219_1,7629 SUDHL4_400M_050219_1,7629,KGKGLIAA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7630 40.54 226.0 295780.0 25 0 17581.0 + 34226 SLPPGVHISY 10 97 535.2873472382666 1068.5601415433332 2 535.2877075076103 MULTI CID FTMS 0 0 0 7624 120369.390625 0.6097318819708586 -4 0.2648849487304687 6 Unmodified _SLPPGVHISY_ ENSG00000139626|ENST00000267082|ITGB7;ENST00000548269.1_1_12:53587490-53588125:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7 22.736283301280096 0.4578556481593033 5 {[TV]|[{I|L}S]}P[NG]{I|L}P 7 5 34.537 0.0 0.0 3.2321 0.0 0.0 0.0 387.1799410455688 387.1799410455688 16.745747447142488 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[TV]|[{I|L}S]}P[NG]{I|L}P 3.2321 - 355 + 1 2.221 63758.7 1.0 3342 4286 7624 SUDHL4_400M_050219_1,7630 SUDHL4_400M_050219_1,7630,SLPPGVHISY False True SLPPGVHISY 40.539986 535.28770750761 1666401.5 7624.0 nc|ENSG00000139626|P26010-2|ITGB7;;ENSG00000139626|ENST00000267082|ITGB7;;ENST00000548269.1_1_12:53587490-53588125:-|nuORF 3.4056602319081626 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7631 40.547 383.0 214770.0 25 0 14742.0 + -1 LLPDTYQHL 9 132 550.245853781557 1098.477154629914 2 550.2449828982353 MULTI CID FTMS 0 0 0 7624 115913.875 1.0 0 0.0 7 2 Oxidation (M) _AM(Oxidation (M))TEVCGM(Oxidation (M))IL_ ENSG00000110395|ENST00000264033|CBL 26.88365393820708 0.3646707531412818 5 [EP]PD{I|L}VETCP 10 -1 + 33.408 0.0 0.0 3.0413 3.0413 72.862 0.0 0.0 0.0 6.532125137753436 0.5115252244738073 0.5115252244738073 0.5115252244738073 0 0.5 0.0 1.0994850021680094 0.0 [EP]PD{I|L}VETCP;[EP]PD{I|L}VE[WD];[EP]PD{I|L}EVTCP;[EP]PD{I|L}EV[WD];[EP]PDQNVTCP;[EP]PDQNV[WD];[EP]PD{I|L}E[WD]V;[EP]PD{I|L}E{[CT]|[{M(Oxidation (M))|F}G]}PV;[EP]PD{I|L}E{[CT]|[{M(Oxidation (M))|F}G]}VP;[EP]PD{I|L}E[{I|L}P][CS] 3.0413;2.9947;2.6302;2.5836;2.0797;2.0331;1.9141;1.7394;1.5375;1.5102 -;-;-;-;-;-;-;-;-;- 700 + 1 2.221 66432.0 1.0 3343 4286 7624 SUDHL4_400M_050219_1,7631 SUDHL4_400M_050219_1,7631,AMTEVCGMIL False False LLPDTYQHL 40.546869 550.244982898235 319658.09375 7624.0 ENSG00000110395|ENST00000264033|CBL 2.5470630327860517 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7632 40.561 800.0 238830.0 25 0 35737.0 -1 0 200 405.7888984006029 809.5632438680058 2 405.7885314822197 MULTI CID FTMS 0 0 0 7624 97979.1796875 1.0 0 0.0 8 5 W 1 -1 12.218 0.0 0.0 1.5093 0.0 0.0 605.4722995094105 0.0 605.4722995094105 0.0 2.464577609514471 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.5093 - 51 + 1 2.221 147335.6 0.8700000047683716 3344 4286 7624 SUDHL4_400M_050219_1,7632 SUDHL4_400M_050219_1,7632, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7633 40.562 79.0 762090.0 25 0 96654.0 + 42077 VQVVRWAA 8 84 464.7702805603327 927.5260081874654 2 464.7701904177666 MULTI CID FTMS 0 0 0 7624 335054.03125 0.3996184036045134 -7 0.3371925354003906 9 Unmodified _VQVVRWAA_ REV__ENST00000260570.7_1_2:27712549-27712609:-|nuORF 2.577480529830294 0.808687252328423 5 C 1 -1 2.4743 0.0 0.0 0.26676 0.0 0.0 361.2314047712529 460.2740572565063 821.5054620277592 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.26676 - 6 + 1 2.221 54026.0 1.0 3345 4286 7624 SUDHL4_400M_050219_1,7633 SUDHL4_400M_050219_1,7633,VQVVRWAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7634 40.564 89.0 604040.0 25 0 47725.0 + + -1 HLDEAIHVL 9 87 523.7795344359253 1045.5445159386504 2 523.7853271365166 MULTI CID FTMS 0 0 0 7624 253189.640625 0.4571252369250705 -7 0.3371925354003906 10 Carbamidomethyl (C) _LVTLPC(Carbamidomethyl (C))GSTV_ ENSG00000071564|ENST00000262965|TCF3;nc|ENSG00000071564|P15923-2|TCF3;nc|ENSG00000071564|P15923-3|TCF3 15.847184025352805 0.5816416552707754 5 {NN|[MP]|[D{I|L}]|[EV]}C(Carbamidomethyl (C))V{I|L}V 6 -1 24.078 0.0 0.0 2.3029 0.0 0.0 0.0 343.16399771038795 343.16399771038795 1.1367153007988762 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}C(Carbamidomethyl (C))V{I|L}V 2.3029 - 147 1 2.221 49323.8 1.0 3346 4286 7624 SUDHL4_400M_050219_1,7634 SUDHL4_400M_050219_1,7634,LVTLPCGSTV False False HLDEAIHVL 40.564452 523.785327136517 3908144.0 7624.0 ENSG00000071564|ENST00000262965|TCF3;;nc|ENSG00000071564|P15923-2|TCF3;;nc|ENSG00000071564|P15923-3|TCF3 0.904021052022775 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7635 40.568 155.0 353830.0 25 0 35993.0 + 18800 LAQFEKSV 8 93 461.2554867244279 920.4964205156558 2 461.2554504275322 MULTI CID FTMS 0 0 0 7624 165884.375 1.0 0 0.0 11 Unmodified _LAQFEKSV_ REV__ENSG00000115548|ENST00000312912|KDM3A 14.581692164780916 0.6954967302934248 5 [YV][TP][KA]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 + 18.274 0.0 0.0 1.9852 1.9852 74.833 0.0 0.0 0.0 3.0102999566398143 0.6694678963061342 0.6694678963061342 3.0102999566398143 0 0.3807196863200844 2.0 0.2302046884880938 0.0 [YV][TP][KA]{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}A][{M(Oxidation (M))|F}E][KA]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}T{[TV]|[{I|L}S]}M{[QD]|[EN]|[WG]|[KD]|[RS]} 1.9852;1.6582;0.41308 -;-;- 129 1 2.221 47561.2 1.0 3347 4286 7624 SUDHL4_400M_050219_1,7635 SUDHL4_400M_050219_1,7635,LAQFEKSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7636 40.576 390.0 214280.0 25 0 22390.0 + 2929 AVGVVRFH 8 124 442.7567544630159 0 442.7567321658134 PEAK CID FTMS 0 0 0 7624 132239.65625 0.3973319774915236 -9 0.404327392578125 12 Unmodified _AVGVVRFH_ REV__ENSG00000142609|ENST00000682832|CFAP74;REV__nc|ENSG00000142609|Q9C0B2|CFAP74 11.114462752807354 0.5290325060821968 5 W 1 -1 3.0989 0.0 0.0 0.35076 0.0 0.0 459.2764656137287 235.1190432184204 694.3955088321491 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.35076 - 7 + 1 2.221 69348.7 1.0 3348 4286 7624 SUDHL4_400M_050219_1,7636 SUDHL4_400M_050219_1,7636,AVGVVRFH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7638 40.58 80.0 887120.0 25 0 119700.0 24040 LWALLVYNA 9 73 531.8004047140766 1061.5862564949532 2 531.8007690310478 MULTI CID FTMS 0 0 0 7637 580560.25 0.0370060837934763 5 -0.1669883728027343 1 Unmodified _LWALLVYNA_ ENSG00000112414|ENST00000367609|ADGRG6;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6 30.22481116460888 0.1466181017706357 5 DVVYNA 6 5 48.008 0.0 0.0 4.5223 0.0 0.0 382.2697926251969 0.0 382.2697926251969 0.0 35.49085977895906 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 DVVYNA 4.5223 - 47 1 2.221 60796.2 1.0 3349 4287 7637 SUDHL4_400M_050219_1,7638 SUDHL4_400M_050219_1,7638,LWALLVYNA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7639 40.582 59.0 924230.0 25 0 140280.0 23214 LSSRGQLQL 9 97 501.2911205594207 1000.5676881856414 2 501.2904540896416 MULTI CID FTMS 0 0 0 7637 648302.0 0.8138084017800984 -2 0.164703369140625 2 Unmodified _LSSRGQLQL_ ENST00000531038.5_1_4:8472779-8495174:+|nuORF 12.531546534597751 0.4974689918368763 5 {M(Oxidation (M))|F}S{I|L} 3 7 17.483 0.0 0.0 1.7473 0.0 0.0 635.3982373573195 0.0 635.3982373573195 0.0 2.156218355517229 0.0 0.0 0 0.0 0.0 0.25 0.0 {M(Oxidation (M))|F}S{I|L} 1.7473 - 60 + 1 2.221 49709.0 1.0 3350 4287 7637 SUDHL4_400M_050219_1,7639 SUDHL4_400M_050219_1,7639,LSSRGQLQL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7640 40.583 55.0 733860.0 25 0 101540.0 + 39539 VAWGRELI 8 71 472.27039470913707 942.5262364850742 2 472.2699157595634 MULTI CID FTMS 0 0 0 7637 592515.8125 0.5684373737838883 -5 0.3196182250976562 3 Unmodified _VAWGRELI_ REV__nc|ENSG00000140955|Q8NCV1-2|ADAD2 11.114462752807354 0.7467182956244686 5 {I|L} 1 -1 13.979 0.0 0.0 1.4832 0.0 0.0 811.4312790649554 0.0 811.4312790649554 0.0 3.177418734074564 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4832 + + 32 + 1 2.221 37105.4 1.0 3351 4287 7637 SUDHL4_400M_050219_1,7640 SUDHL4_400M_050219_1,7640,VAWGRELI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7641 40.585 77.0 633560.0 25 0 47642.0 + 24520 MIQDLDITV 9 89 524.2718149800277 1046.5290770268552 2 524.2719604372978 MULTI CID FTMS 0 0 0 7637 497275.59375 0.9544156816964404 -2 0.164703369140625 4 Unmodified _MIQDLDITV_ ENSG00000095321|ENST00000318080|CRAT;nc|ENSG00000095321|P43155-2|CRAT;nc|ENSG00000095321|P43155-3|CRAT 18.1463463914782 0.3454829746528889 5 {NN|[MP]|[D{I|L}]|[EV]}C(Carbamidomethyl (C))V{I|L}D 6 6 24.1 0.0 0.0 2.3028 0.0 0.0 0.0 328.180358114999 328.180358114999 2.372763256579269 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}C(Carbamidomethyl (C))V{I|L}D 2.3028 - 258 1 2.221 45958.3 1.0 3352 4287 7637 SUDHL4_400M_050219_1,7641 SUDHL4_400M_050219_1,7641,MIQDLDITV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7642 40.587 63.0 898240.0 25 0 99691.0 + 45316 YSHLPVSSL 9 100 501.7665395649517 1001.5185261967034 2 501.7666808962822 MULTI CID FTMS 0 0 0 7637 329480.40625 0.3320602027186841 -5 0.3196182250976562 5 Unmodified _YSHLPVSSL_ ENSG00000113916|ENST00000406870|BCL6;nc|ENSG00000113916|P41182-2|BCL6 34.10243960390752 0.1078313939113124 5 {M(Oxidation (M))|F}S{I|L} 3 7 21.414 0.0 0.0 2.1382 0.0 0.0 636.3489532980691 0.0 636.3489532980691 0.0 10.155352858835547 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 {M(Oxidation (M))|F}S{I|L} 2.1382 - 53 + 1 2.221 49248.5 1.0 3353 4287 7637 SUDHL4_400M_050219_1,7642 SUDHL4_400M_050219_1,7642,YSHLPVSSL True True YSHLPVSSL 40.586633 501.7668 14972988.0 7637.0 ENSG00000113916|ENST00000406870|BCL6;;nc|ENSG00000113916|P41182-2|BCL6 4.3541953563690186 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7643 40.591 251.0 257170.0 25 0 39203.0 + 1837 ALTRALALA 9 105 450.2864764038144 898.5583998744288 2 450.2861511111259 MULTI CID FTMS 0 0 0 7637 136979.578125 0.81475129744882 -2 0.164703369140625 6 Unmodified _ALTRALALA_ ENSG00000151176|ENST00000280800|PLBD2;nc|ENSG00000151176|Q8NHP8-2|PLBD2 32.78568957990786 0.1150597335874693 5 [{I|L}A]V[QT]{I|L}A{I|L}A 9 3 + 53.618 0.0 0.0 5.9671 5.9671 84.442 0.0 0.0 0.0 22.24301211992909 39.63878728569696 22.24301211992909 3.4678748622465605 0 1.024227503252014 2.0 0.3252574989159953 0.0 [{I|L}A]V[QT]{I|L}A{I|L}A;[{I|L}A]V{[SA]|[TG]}A{I|L}A{I|L}A;[{I|L}A]V{[SA]|[TG]}VR{I|L}A;[{I|L}A]{[SA]|[TG]}VA{I|L}A{I|L}A;[{I|L}A]{[SA]|[TG]}VVR{I|L}A;[{I|L}A]V{[SA]|[TG]}V[VG]{I|L}A;[{I|L}A]V[KT][PS]{I|L}A;[{I|L}A]{[SA]|[TG]}VV[VG]{I|L}A;[WR]VVR{I|L}A;[{I|L}A][WR][RV]V 5.9671;5.5812;5.1893;4.8033;4.4114;4.1645;3.8804;3.3866;2.0034;1.9479 -;-;-;-;-;-;-;-;-;- 349 1 2.221 55121.7 1.0 3354 4287 7637 SUDHL4_400M_050219_1,7643 SUDHL4_400M_050219_1,7643,ALTRALALA True True ALTRALALA 40.5913 450.286151111126 815247.75 7637.0 ENSG00000151176|ENST00000280800|PLBD2;;nc|ENSG00000151176|Q8NHP8-2|PLBD2 -0.4045430024464925 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7644 40.597 336.0 285100.0 25 0 48717.0 + 40818 VLMEDRLTNRL 11 77 453.91855434233327 1358.7338336271998 3 453.9185668826103 MULTI CID FTMS 0 0 0 7637 140183.390625 0.7396327399802258 -2 0.164703369140625 7 Unmodified _VLMEDRLTNRL_ ENSG00000120063|ENST00000439174|GNA13;nc|ENSG00000120063|Q14344-2|GNA13 28.23362336080872 0.4292685378469897 5 V{I|L}MEDR{I|L} 7 4 75.253 0.0 0.0 5.5385 0.0 0.0 0.0 499.2633150690063 499.2633150690063 63.83323361483414 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.805462187404089 + V{I|L}MEDR{I|L} 5.5385 + + 52 + 1 2.221 82029.9 1.0 3355 4287 7637 SUDHL4_400M_050219_1,7644 SUDHL4_400M_050219_1,7644,VLMEDRLTNRL False True VLMEDRLTNRL 40.597385 453.91856688261 912692.6875 7637.0 nc|ENSG00000120063|Q14344-2|GNA13;;ENSG00000120063|ENST00000439174|GNA13 5.293428341547648 3.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7645 40.601 185.0 287250.0 25 0 24281.0 + 19099 LDSFCARAV 9 95 491.24324468148336 980.4719364297669 2 491.2432739138603 MULTI CID FTMS 0 0 0 7637 88074.7578125 1.0 0 0.0 8 Unmodified _LDSFCARAV_ REV__ENSG00000183862|ENST00000329903|CNGA2 12.531546534597751 0.4974689918368763 5 [MN]V{I|L} 4 -1 13.812 0.0 0.0 1.4087 0.0 0.0 0.0 520.2166231744749 520.2166231744749 1.593793813122062 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [MN]V{I|L} 1.4087 - 68 + 1 2.221 47609.3 1.0 3356 4287 7637 SUDHL4_400M_050219_1,7645 SUDHL4_400M_050219_1,7645,LDSFCARAV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7646 40.606 254.0 186620.0 25 0 10283.0 + 37916 TLYEAVREV 9 90 540.2896250496444 1078.5646971660888 2 540.2880126833916 MULTI CID FTMS 0 0 0 7637 87236.8359375 0.0345262563566591 12 -0.7055854797363281 9 Unmodified _TLYEAVREV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF 11.494710602746466 0.5255349189887087 5 [{I|L}T]YE 4 5 36.995 0.0 0.0 3.43 0.0 0.0 0.0 569.3050020807249 569.3050020807249 25.212047871875907 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + [{I|L}T]YE 3.43 + + 141 + 1 2.221 43868.5 1.0 3357 4287 7637 SUDHL4_400M_050219_1,7646 SUDHL4_400M_050219_1,7646,TLYEAVREV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7648 40.61 8.1 5973900.0 25 0 1485600.0 + 42860 VVLGPPAA 8 63 362.2222113975729 722.4298698619458 2 362.2221862673759 MULTI CID FTMS 0 0 0 7647 7064166.0 0.5621852256515015 2 -0.054107666015625 1 Unmodified _VVLGPPAA_ REV__ENST00000468758.1_1_2:134877558-135010718:+|nuORF;REV__ENST00000481801.5_1_2:134877633-135011843:+|nuORF 0.0 0.8243325171867699 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.221 46993.0 1.0 3358 4288 7647 SUDHL4_400M_050219_1,7648 SUDHL4_400M_050219_1,7648,VVLGPPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7649 40.613 119.0 564470.0 25 0 65804.0 + 42653 VTVPPGPSL 9 96 433.75257015636254 0 433.7527648806572 PEAK CID FTMS 0 0 0 7647 330306.25 0.0382875873132892 26 -1.6527786254882812 2 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 64.23631603340823 0.0129441640563295 5 PP[TA]E 5 7 12.536 0.0 0.0 1.4484 0.0 0.0 299.184062449087 68.05134760074452 367.2354100498315 0.0 0.0 0.0 0.0 0 0.0 0.0 1.110924374808178 0.0 PP[TA]E 1.4484 - 93 + 1 2.221 57087.9 1.0 3359 4288 7647 SUDHL4_400M_050219_1,7649 SUDHL4_400M_050219_1,7649,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7650 40.627 800.0 211970.0 25 0 12547.0 + 9549 FLHDGQEYTL 10 157 611.7906678839497 1221.566782834699 2 611.7898437380791 MULTI CID FTMS 0 0 0 7647 124057.6875 0.7567159237315129 -3 0.1946144104003906 3 Unmodified _FLHDGQEYTL_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 106.94017166704064 0.0046191154308253 5 [H{I|L}]{M(Oxidation (M))|F}DGQEYT{I|L} 10 2 + 70.396 0.0 0.0 5.7628 5.7628 84.838 0.0 0.0 0.0 2.26998727936261 40.39094495025247 2.26998727936261 4.313637641589864 0 1.1549471895720984 0.0 1.370371515030528 0.6549471895720984 [H{I|L}]{M(Oxidation (M))|F}DGQEYT{I|L};[HD]{I|L}{M(Oxidation (M))|F}GQEYT{I|L};[YT]{I|L}{[CA]|SS}Q{M(Oxidation (M))|F}YT{I|L};[H{I|L}]D{M(Oxidation (M))|F}GQEYT{I|L};[YT]{I|L}{M(Oxidation (M))|F}S{[QS]|[NT]}YT{I|L};[{I|L}T]Y{[CA]|SS}Q{M(Oxidation (M))|F}YT{I|L};[YT]{[WT]|[RM]}Q{M(Oxidation (M))|F}YT{I|L};[{I|L}T]Y{M(Oxidation (M))|F}S{[QS]|[NT]}YT{I|L};[H{I|L}]{M(Oxidation (M))|F}DG[AG]EYT{I|L};[H{I|L}]{M(Oxidation (M))|F}DGQETY{I|L} 5.7628;5.4097;5.1024;4.9816;4.8863;4.8497;4.8141;4.6335;4.4764;4.4116 -;-;-;-;-;-;-;-;-;- 3994 1 2.221 124799.1 0.6499999761581421 3360 4288 7647 SUDHL4_400M_050219_1,7650 SUDHL4_400M_050219_1,7650,FLHDGQEYTL True True FLHDGQEYTL 40.626677 611.789843738079 966121.6875 7647.0 nc|ENSG00000155657|Q8WZ42-3|TTN;;nc|ENSG00000155657|Q8WZ42-13|TTN;;nc|ENSG00000155657|Q8WZ42-9|TTN;;nc|ENSG00000155657|Q8WZ42-12|TTN;;nc|ENSG00000155657|Q8WZ42-4|TTN;;nc|ENSG00000155657|Q8WZ42-5|TTN;;nc|ENSG00000155657|Q8WZ42-11|TTN;;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant;;nc|ENSG00000155657|Q8WZ42-10|TTN;;ENSG00000155657|ENST00000589042|TTN;;nc|ENSG00000155657|Q8WZ42-2|TTN;;nc|ENSG00000155657|Q8WZ42-6|TTN;;nc|ENSG00000155657|Q8WZ42-7|TTN;;nc|ENSG00000155657|Q8WZ42|TTN;;nc|ENSG00000155657|Q8WZ42-8|TTN 8.201772848765055 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7651 40.631 239.0 242900.0 25 0 13775.0 + 41055 VMLEYVERA 9 85 555.2872947357213 1108.5600365382425 2 555.2871581912041 MULTI CID FTMS 0 0 0 7647 99268.5859375 1.0 0 0.0 4 Unmodified _VMLEYVERA_ ENSG00000108094|ENST00000374749|CUL2;ENST00000478044.1_1_10:35352986-35363196:-|nuORF;nc|ENSG00000108094|Q13617-2|CUL2 34.93206674587334 0.1032771302489716 5 VM{I|L}EYV 6 3 71.063 0.0 0.0 6.4104 0.0 0.0 0.0 371.17283044986567 371.17283044986567 53.61555346200056 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3807196863200844 0.0 + VM{I|L}EYV 6.4104 + + 114 + 1 2.221 52298.0 1.0 3361 4288 7647 SUDHL4_400M_050219_1,7651 SUDHL4_400M_050219_1,7651,VMLEYVERA True True VMLEYVERA 40.631164 555.287158191204 566065.0625 7647.0 ENSG00000108094|ENST00000374749|CUL2;;ENST00000478044.1_1_10:35352986-35363196:-|nuORF;;nc|ENSG00000108094|Q13617-2|CUL2 5.268958727518718 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7652 40.639 441.0 169190.0 25 0 18817.0 + -1 VIGLGCIILV 10 122 528.828343188238 1055.642133443276 2 528.8300659060478 MULTI CID FTMS 0 0 0 7647 84686.3671875 0.1440005563490747 -14 0.5600814819335938 5 Carbamidomethyl (C) _VIGLGC(Carbamidomethyl (C))IILV_ REV__ENSG00000174417|ENST00000518632|TRHR 7.910154910731844 0.6900473968920092 5 Y 1 -1 14.604 0.0 0.0 1.3834 0.0 0.0 874.5678974587041 0.0 874.5678974587041 0.0 2.614393726401687 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3834 - 97 + 1 2.221 61970.6 1.0 3362 4288 7647 SUDHL4_400M_050219_1,7652 SUDHL4_400M_050219_1,7652,VIGLGCIILV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7653 40.653 800.0 174950.0 25 0 11952.0 + 34326 SLSDQTLEV 9 104 991.4963976073586 990.4891211407586 1 991.4947997927666 MULTI CID FTMS 0 0 0 7647 122610.3515625 0.7514033761078611 -2 0.0846443176269531 6 Unmodified _SLSDQTLEV_ ENSG00000106477|ENST00000223208|CEP41;ENST00000498527.5_1_7:130050951-130080846:-|nuORF;nc|ENSG00000106477|Q9BYV8-2|CEP41;nc|ENSG00000106477|Q9BYV8-5|CEP41 72.96794272382148 0.0199516581995792 5 {[TV]|[{I|L}S]}SDQT{I|L}EV 9 0 + 68.997 0.0 0.0 6.966 6.966 88.024 0.0 0.0 0.0 4.393326938302621 7.0289375146764925 4.393326938302621 4.393326938302621 0 0.5649093276264391 1.2218487496163564 2.110924374808178 0.0 + + {[TV]|[{I|L}S]}SDQT{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}SSQT{I|L}EV;{[TV]|[{I|L}S]}DSQT{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}PNSS{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}SDQT{I|L}D{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}STVT{I|L}EV;{[TV]|[{I|L}S]}SD[AG]T{I|L}EV;{[TV]|[{I|L}S]}SDQTE{I|L}V;[QT]DSVT{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}SSQT{I|L}D{I|L} 6.966;6.5224;6.5224;6.4156;6.2563;6.0409;6.0363;5.9796;5.8747;5.8128 +;-;-;-;-;-;-;-;-;- + 7036 1 2.221 92107.5 0.6299999952316284 3363 4288 7647 SUDHL4_400M_050219_1,7653 SUDHL4_400M_050219_1,7653,SLSDQTLEV True True SLSDQTLEV 40.652877 991.494799792767 1091314.375 7647.0 ENST00000498527.5_1_7:130050951-130080846:-|nuORF;;nc|ENSG00000106477|Q9BYV8-5|CEP41;;nc|ENSG00000106477|Q9BYV8-2|CEP41;;ENSG00000106477|ENST00000223208|CEP41 4.817796389261882 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7655 40.658 33.0 1587100.0 25 0 324030.0 + 42596 VTRLTPRD 8 73 479.2772729471975 956.539992961195 2 479.2773925662041 MULTI CID FTMS 0 0 0 7654 1648295.125 0.9308731592621357 -5 0.317047119140625 1 Unmodified _VTRLTPRD_ REV__ENSG00000167680|ENST00000586582|SEMA6B;REV__nc|ENSG00000167680|Q9H3T3-3|SEMA6B 0.7936320650641473 0.8195151834710337 5 {I|L} 1 -1 8.7724 0.0 0.0 0.9171 0.0 0.0 825.4445625186154 0.0 825.4445625186154 0.0 8.772436660929248 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.9171 + + 1 + 1 2.221 51570.0 1.0 3364 4289 7654 SUDHL4_400M_050219_1,7655 SUDHL4_400M_050219_1,7655,VTRLTPRD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7656 40.66 101.0 537930.0 25 0 52719.0 + 9491 FLDITNPKA 9 83 509.7824047080104 1017.5502564828208 2 509.7823364138603 MULTI CID FTMS 0 0 0 7654 255226.296875 0.4471235264986352 3 -0.0898513793945312 2 Unmodified _FLDITNPKA_ ENSG00000070010|ENST00000263202|UFD1;ENST00000459854.5_1_22:19442175-19463025:-|nuORF;ENST00000489406.1_1_22:19455337-19466647:-|nuORF;nc|ENSG00000070010|Q92890-1|UFD1;nc|ENSG00000070010|Q92890-3|UFD1 21.53697664764585 0.2571576504437394 5 NT{I|L}D{[QN]|[E{I|L}]|[KN]} 6 6 37.224 0.0 0.0 3.6582 0.0 0.0 314.19551284004064 0.0 314.19551284004064 0.0 26.7659970366416 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 NT{I|L}D{[QN]|[E{I|L}]|[KN]} 3.6582 - 58 1 2.221 46768.6 1.0 3365 4289 7654 SUDHL4_400M_050219_1,7656 SUDHL4_400M_050219_1,7656,FLDITNPKA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7658 40.664 67.0 591110.0 25 0 113790.0 34350 SLSSIRRVG 9 60 487.79051604004223 973.5664791468844 2 487.7911254763603 MULTI CID FTMS 0 0 0 7657 574603.4375 0.7535221351130478 -3 0.0840187072753906 1 Unmodified _SLSSIRRVG_ ENSG00000144406|ENST00000673920|UNC80 2.059750862983233 0.8427793054688888 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.221 41025.9 1.0 3366 4290 7657 SUDHL4_400M_050219_1,7658 SUDHL4_400M_050219_1,7658,SLSSIRRVG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7659 40.668 160.0 524180.0 25 0 14305.0 -1 0 118 917.4306871341378 1832.846821335076 2 917.4308959841728 MULTI CID FTMS 0 0 0 7657 319016.78125 0.1729888728998581 -3 0.0840187072753906 2 5 [MN]PN{I|L}NEAQHVTN 13 -1 78.773 0.0 0.0 4.2978 0.0 0.0 0.0 367.1616610162719 367.1616610162719 24.44303650960412 0.0 0.0 0.0 0 0.4876954943324545 1.3979400086720375 0.8494850021680094 1.424742501084005 [MN]PN{I|L}NEAQHVTN 4.2978 - 8085 + 1 2.221 58391.4 1.0 3367 4290 7657 SUDHL4_400M_050219_1,7659 SUDHL4_400M_050219_1,7659, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7660 40.67 105.0 535040.0 25 0 46789.0 + + 9579 FLDITNPKA 9 96 509.8039351943095 1017.593317455419 2 509.8042175173759 MULTI CID FTMS 0 0 0 7657 250363.078125 0.9755843281938178 2 -0.0829696655273437 3 Unmodified _FLISRSPKA_ ENSG00000070010|ENST00000263202|UFD1;ENST00000459854.5_1_22:19442175-19463025:-|nuORF;nc|ENSG00000070010|Q92890-3|UFD1;nc|ENSG00000070010|Q92890-1|UFD1;ENST00000489406.1_1_22:19455337-19466647:-|nuORF 7.910154910731844 0.6385446671287552 5 {I|L}D{I|L}TNP[KA] 8 -1 31.782 0.0 0.0 3.1233 0.0 0.0 147.10669743764396 0.0 147.10669743764396 0.0 22.69121143595636 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 {I|L}D{I|L}TNP[KA] 3.1233 - 171 + 1 2.221 46573.3 1.0 3368 4290 7657 SUDHL4_400M_050219_1,7660 SUDHL4_400M_050219_1,7660,FLISRSPKA False False FLDITNPKA 40.669885 509.804217517376 6174732.5 7657.0 ENSG00000070010|ENST00000263202|UFD1;;ENST00000459854.5_1_22:19442175-19463025:-|nuORF;;nc|ENSG00000070010|Q92890-3|UFD1;;nc|ENSG00000070010|Q92890-1|UFD1;;ENST00000489406.1_1_22:19455337-19466647:-|nuORF 7.493599732716878 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7661 40.673 147.0 400700.0 25 0 36556.0 + + 13461 HLSDAIVEV 9 90 491.76286522501385 981.5111775168276 2 491.7631713747978 MULTI CID FTMS 0 0 0 7657 228427.3125 0.8084548908504042 -1 0.0068817138671875 4 Unmodified _HLSDALVEV_ ENSG00000105778|ENST00000318709|AVL9;nc|ENSG00000105778|Q8NBF6-2|AVL9 42.09456458481378 0.0639583784996157 5 {NN|[MP]|[D{I|L}]|[EV]}{[SA]|[TG]}H{I|L}VEV 9 -1 + 48.333 0.0 0.0 4.9243 4.9243 82.643 0.0 0.0 0.0 17.96771660839286 9.577570906191896 9.577570906191896 4.771212547196626 0 0.5172203223519531 1.154901959985743 0.5467716608392861 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[SA]|[TG]}H{I|L}VEV;{NN|[MP]|[D{I|L}]|[EV]}[HS]A{I|L}VEV;{NN|[MP]|[D{I|L}]|[EV]}{[SA]|[TG]}HV{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[HS]AV{I|L}EV;{[TV]|[{I|L}S]}{[DA]|[EG]}H{I|L}VEV;[{M(Oxidation (M))|F}V]V{I|L}[YN]EV;{[TV]|[{I|L}S]}[HD]A{I|L}VEV;{[TV]|[{I|L}S]}{[DA]|[EG]}HV{I|L}EV;[{M(Oxidation (M))|F}V]VYN{I|L}EV;[H{I|L}]WW{I|L}EV 4.9243;4.4382;4.1068;3.6207;3.0937;2.9146;2.6076;2.2762;2.2739;2.2614 -;-;-;-;-;-;-;-;-;- 191 1 2.221 52247.9 1.0 3369 4290 7657 SUDHL4_400M_050219_1,7661 SUDHL4_400M_050219_1,7661,HLSDALVEV False False HLSDAIVEV 40.672816 491.763171374798 1254280.625 7657.0 ENSG00000105778|ENST00000318709|AVL9;;nc|ENSG00000105778|Q8NBF6-2|AVL9 7.143990357716878 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7662 40.676 156.0 319180.0 25 0 25276.0 + 15755 ISCRREEV 8 89 496.2518411903766 990.4891294475532 2 496.2513305544853 MULTI CID FTMS 0 0 0 7657 167362.625 1.0 0 0.0 5 Unmodified _ISCRREEV_ ENSG00000174564|ENST00000329582|IL20RB;ENST00000475972.1_1_3:136705553-136729062:+|nuORF 14.581692164780916 0.6954967302934248 5 V 1 7 13.979 0.0 0.0 1.4114 0.0 0.0 873.409674957122 0.0 873.409674957122 0.0 -0.0734786913878338 -0.0734786913878338 0.0 0 0.0 0.0 0.0 0.0 + V 1.4114 + + 50 + 1 2.221 47294.9 1.0 3370 4290 7657 SUDHL4_400M_050219_1,7662 SUDHL4_400M_050219_1,7662,ISCRREEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7663 40.683 408.0 265170.0 25 0 40406.0 + 2881 AVEASGGITL 10 136 459.25065892717015 916.4867649211404 2 459.2515441775322 MULTI CID FTMS 0 0 0 7657 106185.421875 1.0 0 0.0 6 Unmodified _AVEASGGITL_ ENSG00000103485|ENST00000395384|QPRT;ENST00000219771.7_1_16:29690360-29708729:+|nuORF;ENST00000564967.1_1_16:29708453-29708729:+|nuORF 20.453626601364224 0.5043500229302764 5 T{I|L} 2 8 16.722 0.0 0.0 1.8245 0.0 0.0 684.3440017148888 0.0 684.3440017148888 0.0 6.63303128443836 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 + T{I|L} 1.8245 + + 176 + 1 2.221 85804.1 1.0 3371 4290 7657 SUDHL4_400M_050219_1,7663 SUDHL4_400M_050219_1,7663,AVEASGGITL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7664 40.697 800.0 120410.0 25 0 14362.0 + 17353 KLYDIDVAKV 10 151 582.3376409233177 1162.6607289134354 2 582.3378784060478 MULTI CID FTMS 0 0 0 7657 92520.3671875 0.8639309865262271 2 -0.0829696655273437 7 Unmodified _KLYDIDVAKV_ ENSG00000198242|ENST00000422514|RPL23A;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 46.4752305370441 0.1008384395814411 5 K{I|L}YD{I|L}DVAVK 10 2 + 59.505 0.0 0.0 5.118 5.118 78.749 0.0 0.0 0.0 16.53212513775344 0.9017663034908808 0.9017663034908808 0.9017663034908808 0 2.5194138034288294 0.0 0.0 0.3054621874040891 K{I|L}YD{I|L}DVAVK;K{I|L}YD{I|L}DVAKV 5.118;5.0405 -;+ + 746 + 1 2.221 73815.0 0.5799999833106995 3372 4290 7657 SUDHL4_400M_050219_1,7664 SUDHL4_400M_050219_1,7664,KLYDIDVAKV True True KLYDIDVAKV 40.697008 582.337878406048 413791.46875 7657.0 ENSG00000198242|ENST00000422514|RPL23A;;ENST00000482216.1_1_5:120911545-120911773:-|nuORF;;ENST00000498752.1_1_11:43740306-43740693:+|nuORF 5.786828358968099 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7665 40.7 161.0 278110.0 25 0 22471.0 42631 VTVAHLRPV 9 86 496.3043321391656 990.5941113451312 2 496.3048278689384 MULTI CID FTMS 0 0 0 7657 87274.3203125 0.9398805604024274 -7 0.3675346374511719 8 Unmodified _VTVAHLRPV_ ENSG00000181852|ENST00000345093|RNF41;ENST00000548225.1_1_12:56604079-56607800:-|nuORF 13.50788311687929 0.4710407108020397 5 EV 2 8 16.058 0.0 0.0 1.621 0.0 0.0 744.4720695744265 0.0 744.4720695744265 0.0 4.463950151760656 0.0 0.0 0 0.0 0.0 0.5 0.0 EV 1.621 - 92 + 1 2.221 39165.3 1.0 3373 4290 7657 SUDHL4_400M_050219_1,7665 SUDHL4_400M_050219_1,7665,VTVAHLRPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7667 40.705 29.0 1688000.0 25 0 305460.0 40845 VLNQQGRP 8 71 456.25663716561263 910.4987213980252 2 456.2566406130791 MULTI CID FTMS 0 0 0 7666 2085677.75 1.0 0 0.0 1 Unmodified _VLNQQGRP_ ENSG00000103067|ENST00000473183|ESRP2;ENST00000566774.1_1_16:68264768-68266536:-|nuORF;nc|ENSG00000103067|Q9H6T0|ESRP2 2.302733041254933 0.8103549651115762 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.221 47428.1 1.0 3374 4291 7666 SUDHL4_400M_050219_1,7667 SUDHL4_400M_050219_1,7667,VLNQQGRP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7668 40.707 108.0 536610.0 25 0 68846.0 + 1541 ALKPDLVNV 9 95 484.7928999678416 967.5712470024832 2 484.7927734255791 MULTI CID FTMS 0 0 0 7666 467714.21875 0.6391649410853926 4 -0.2861671447753906 2 Unmodified _ALKPDLVNV_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 21.53697664764585 0.2571576504437394 5 KKA{I|L}VNV 7 4 26.873 0.0 0.0 2.7773 0.0 0.0 197.06939894843907 0.0 197.06939894843907 0.0 5.244273272324584 0.0 0.0 0 0.718765315847925 0.0 0.0 0.0 KKA{I|L}VNV 2.7773 - 826 1 2.221 52567.6 1.0 3375 4291 7666 SUDHL4_400M_050219_1,7668 SUDHL4_400M_050219_1,7668,ALKPDLVNV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7669 40.709 89.0 709210.0 25 0 68337.0 + 1658 ALNEQIARL 9 89 514.2980350864258 1026.5815172396517 2 514.2979614138603 MULTI CID FTMS 0 0 0 7666 558053.875 0.253520465315059 -3 0.0945854187011718 3 Unmodified _ALNEQIARL_ ENSG00000080986|ENST00000261597|NDC80 53.832793166522166 0.0319663582346103 5 [{I|L}A]NEQ{I|L}AR{I|L} 9 0 + 85.94 0.0 0.0 8.3715 8.3715 94.553 0.0 0.0 0.0 71.33593778117195 11.962724883926654 11.962724883926654 9.208187539523747 0 1.2302046884880935 2.0 0.0 0.805462187404089 + + [{I|L}A]NEQ{I|L}AR{I|L};[{I|L}A]NE[AG]{I|L}AR{I|L};[{I|L}A]GGEQ{I|L}AR{I|L};[{I|L}A]NE{I|L}QAR{I|L};[{I|L}A]GGE[AG]{I|L}AR{I|L};[{I|L}A]NE{I|L}[AG]AR{I|L};[{I|L}A]GGE{I|L}QAR{I|L};[{I|L}A]GGE{I|L}[AG]AR{I|L} 8.3715;7.4745;7.4745;7.4419;6.5818;6.545;6.545;5.6522 +;-;-;-;-;-;-;- + 246 + 1 2.221 52719.2 1.0 3376 4291 7666 SUDHL4_400M_050219_1,7669 SUDHL4_400M_050219_1,7669,ALNEQIARL True True ALNEQIARL 40.709226 514.29796141386 36994710.0 7666.0 ENSG00000080986|ENST00000261597|NDC80 4.718136151631673 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7670 40.712 140.0 530540.0 25 0 35172.0 + 9597 FLKYKEEV 8 98 528.2902764456614 1054.5659999581228 2 528.2908813357353 MULTI CID FTMS 0 0 0 7666 238453.015625 0.1249276760026373 -5 0.179229736328125 4 Unmodified _FLKYKEEV_ REV__ENSG00000077274|ENST00000324068|CAPN6 21.74664581756881 0.5868176546531598 5 {[QN]|[E{I|L}]|[KN]}[RP]A{I|L}EEV 9 -1 + 45.977 0.0 0.0 4.3598 4.3598 86.343 0.0 0.0 0.0 2.4639478435578965 29.96517311139189 2.4639478435578965 10.45757490560674 0 0.7059771852360797 0.958607314841775 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[RP]A{I|L}EEV;[R{I|L}][EP]A{I|L}EEV;[VP][W{I|L}]A{I|L}EEV 4.3598;3.3682;3.2689 -;-;- 126 1 2.221 61033.6 1.0 3377 4291 7666 SUDHL4_400M_050219_1,7670 SUDHL4_400M_050219_1,7670,FLKYKEEV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7671 40.726 800.0 94379.0 25 0 6556.9 -1 0 86 1138.4861202524264 2274.957687571653 2 1138.988574206829 MULTI CID FTMS 0 0 0 7666 109100.0625 0.8192918334753694 -1 0.0404777526855468 5 5 {[CP]|[EA]}TDYS[{M(Oxidation (M))|F}V]S[QA]A 12 -1 31.85 0.0 0.0 1.4 0.0 0.0 0.0 1002.4225062574528 1002.4225062574528 9.138016621929273 0.0 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 {[CP]|[EA]}TDYS[{M(Oxidation (M))|F}V]S[QA]A 1.4 - 5798 1 2.221 58760.9 0.5400000214576721 3378 4291 7666 SUDHL4_400M_050219_1,7671 SUDHL4_400M_050219_1,7671, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7672 40.74 800.0 231420.0 25 0 20553.0 15926 ISYFIYCMS 9 179 563.7488230171542 1125.4830931011084 2 563.7493163943291 MULTI CID FTMS 0 0 0 7666 109294.046875 0.2763858511122457 -2 0.0473594665527343 6 Unmodified _ISYFIYCMS_ ENST00000025301.3_1_13:42875194-42875302:+|nuORF 19.256988751693697 0.3154191944385105 5 [DP]VAQ{I|L}Y 7 8 41.191 0.0 0.0 3.6598 0.0 0.0 0.0 336.0686393259709 336.0686393259709 11.881880091857369 0.0 0.0 0.0 0 0.9247425010840048 0.2924298239020636 0.5387254899964358 0.5752574989159953 [DP]VAQ{I|L}Y 3.6598 - 1023 1 2.221 140193.3 0.5799999833106995 3379 4291 7666 SUDHL4_400M_050219_1,7672 SUDHL4_400M_050219_1,7672,ISYFIYCMS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7673 40.743 146.0 1144500.0 25 0 371100.0 26029 NMAPHVAQ 8 90 867.41221270806 866.40493624146 1 867.4089843630791 MULTI CID FTMS 0 0 0 7666 388058.65625 0.3046220338552304 -7 0.3644065856933594 7 Unmodified _NMAPHVAQ_ ENSG00000154914|ENST00000285199|USP43;nc|ENSG00000154914|Q70EL4-2|USP43;nc|ENSG00000154914|Q70EL4-3|USP43;nc|ENSG00000154914|Q70EL4-4|USP43 14.581692164780916 0.6954967302934248 5 VP[NP]{I|L}Q 6 6 19.43 0.0 0.0 2.2426 0.0 0.0 200.02620121858428 0.0 200.02620121858428 0.0 -4.392653074926049 -4.392653074926049 0.0 0 0.0 0.0 0.0 0.3054621874040891 VP[NP]{I|L}Q 2.2426 - 154 + 1 2.221 112838.4 1.0 3380 4291 7666 SUDHL4_400M_050219_1,7673 SUDHL4_400M_050219_1,7673,NMAPHVAQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7675 40.759 800.0 141410.0 25 0 9144.1 -1 0 136 845.8973780871878 1689.7802032411755 2 845.8973876833916 MULTI CID FTMS 0 0 0 7674 66905.1015625 0.6578797042778433 1 -0.0581588745117187 1 5 MPN{I|L}NE{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}S{I|L}AP{I|L}Q 15 -1 + 123.22 0.0 0.0 7.2922 7.2922 86.413 0.0 0.0 0.0 30.66946789630613 12.83809673312028 12.83809673312028 2.530834337684311 0 2.5356668758921828 1.3979400086720375 0.7059771852360797 0.805462187404089 MPN{I|L}NE{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}S{I|L}AP{I|L}Q;MPN{I|L}N{M(Oxidation (M))|F}Q[DC]S{I|L}AP{I|L}Q;MPN{I|L}N{M(Oxidation (M))|F}Q{[DS]|[MA]|[CV]|TT}C{I|L}AP{I|L}Q;MPN{I|L}GGE{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}S{I|L}AP{I|L}Q;MPGG{I|L}NE{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}S{I|L}AP{I|L}Q;MPN{I|L}N{M(Oxidation (M))|F}[WC(Carbamidomethyl (C))]S{I|L}AP{I|L}Q;MPN{I|L}N{M(Oxidation (M))|F}[AG][DC]S{I|L}AP{I|L}Q;MPN{I|L}GG{M(Oxidation (M))|F}Q[DC]S{I|L}AP{I|L}Q;MPGG{I|L}N{M(Oxidation (M))|F}Q[DC]S{I|L}AP{I|L}Q;MPN{I|L}GG{M(Oxidation (M))|F}Q{[DS]|[MA]|[CV]|TT}C{I|L}AP{I|L}Q 7.2922;7.1424;7.0216;6.7577;6.7577;6.7465;6.6079;6.6079;6.6079;6.4871 -;-;-;-;-;-;-;-;-;- 15028 + 1 2.221 82831.5 0.6000000238418579 3381 4292 7674 SUDHL4_400M_050219_1,7675 SUDHL4_400M_050219_1,7675, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7676 40.761 60.0 1261900.0 25 0 358170.0 + 37392 TLAGDVHIV 9 80 462.7613228597358 923.5080927862716 2 462.7613098025322 MULTI CID FTMS 0 0 0 7674 829189.25 0.5895010646277002 -1 0.0424919128417968 2 Unmodified _TLAGDVHIV_ ENSG00000111237|ENST00000549578|VPS29;ENST00000548259.1_1_12:110930799-110939856:-|nuORF;ENST00000548539.1_1_12:110929849-110934008:-|nuORF;nc|ENSG00000111237|Q9UBQ0-2|VPS29 21.74664581756881 0.2544899275067181 5 [{I|L}T]A 3 6 37.007 0.0 0.0 4.0072 0.0 0.0 0.0 635.3163339374951 635.3163339374951 10.351584312837048 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + [{I|L}T]A 4.0072 + + 170 + 1 2.221 64416.0 1.0 3382 4292 7674 SUDHL4_400M_050219_1,7676 SUDHL4_400M_050219_1,7676,TLAGDVHIV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7677 40.762 74.0 804250.0 25 0 86791.0 33541 SILGHLMP 8 89 434.2420607950487 866.4695686568974 2 434.2411682009697 MULTI CID FTMS 0 0 0 7674 351566.375 0.5359646924644671 -2 0.0829696655273437 3 Unmodified _SILGHLMP_ ENST00000358337.9_1_5:140050841-140051006:+|nuORF 9.347437153973935 0.7675937258251505 5 {I|L} 1 7 10.837 0.0 0.0 1.2508 0.0 0.0 735.3745807192006 0.0 735.3745807192006 0.0 3.0508584865475985 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2508 + + 18 + 1 2.221 51674.7 1.0 3383 4292 7674 SUDHL4_400M_050219_1,7677 SUDHL4_400M_050219_1,7677,SILGHLMP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7678 40.767 230.0 220150.0 25 0 21245.0 33389 SGPPGLLYV 9 92 451.7527404562188 901.4909279792377 2 451.7524291872978 MULTI CID FTMS 0 0 0 7674 155531.671875 0.9239392340347324 -2 0.0829696655273437 4 Unmodified _SGPPGLLYV_ nc|ENSG00000106113|Q13324-2|CRHR2 12.531546534597751 0.4974689918368763 5 DVY 3 8 26.995 0.0 0.0 2.9945 0.0 0.0 506.3124439477908 0.0 506.3124439477908 0.0 9.521115086180778 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 DVY 2.9945 - 74 + 1 2.221 45461.9 1.0 3384 4292 7674 SUDHL4_400M_050219_1,7678 SUDHL4_400M_050219_1,7678,SGPPGLLYV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 7679 40.78 800.0 202990.0 25 0 29051.0 -1 AIYPMGYCST 10 164 581.7494264159864 1161.4842998987726 2 581.7495605349541 MULTI CID FTMS 0 0 0 7674 131220.65625 0.5856472619261308 -1 0.0424919128417968 5 Carbamidomethyl (C) _AIYPMGYC(Carbamidomethyl (C))ST_ TBRG1|p.V214M|1|0.4|ENSG00000154144|chr11:124626952-124626952|G/A|missense_variant 21.74664581756881 0.480091245866545 5 [{I|L}A]Y[QP]TTCCY 10 -1 + 39.56 0.0 0.0 3.406 3.406 84.064 0.0 0.0 0.0 26.796102499775465 3.706290716515909 3.706290716515909 10.791812460476244 0 0.6421590589602533 1.6989700043360187 0.3807196863200844 0.0 [{I|L}A]Y[QP]TTCCY;[{I|L}A]Y[QP]T[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F};[QP]TG[NG][WK][C(Carbamidomethyl (C))D];[QP]T{NN|[MP]|[D{I|L}]|[EV]}[WK][C(Carbamidomethyl (C))D];[QP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{[WT]|[RM]}[C(Carbamidomethyl (C))D];[QP][PS]YP[QA][C(Carbamidomethyl (C))D] 3.406;2.4769;0.49483;0.4042;0.15758;0.0031641 -;-;-;-;-;- 890 + 1 2.221 122242.9 0.6600000262260437 3385 4292 7674 SUDHL4_400M_050219_1,7679 SUDHL4_400M_050219_1,7679,AIYPMGYCST False False False False variant PXD020620_cell_line SUDHL4_400M_050219_1 7680 40.794 800.0 239190.0 25 0 18283.0 + 20830 LLYQEGAKMAV 11 178 611.8288060772502 1221.6430592213003 2 611.8295165896416 MULTI CID FTMS 0 0 0 7674 106469.1796875 0.8585921778586553 -1 0.0424919128417968 6 Unmodified _LLYQEGAKMAV_ ENSG00000173801|ENST00000393931|JUP 85.76441949171179 0.0033696626484081 5 {I|L}{I|L}YQE[RK]CAV 10 3 + 78.501 0.0 0.0 6.4259 6.4259 86.668 0.0 0.0 0.0 19.44517402673733 4.366351778869102 4.366351778869102 4.366351778869102 0 1.6593793813122062 2.0 0.7059771852360797 0.4247425010840047 {I|L}{I|L}YQE[RK]CAV;{I|L}{I|L}YQE[RK]CG{I|L};{I|L}{I|L}YQE[RK]C(Carbamidomethyl (C)){I|L};{I|L}{I|L}YQ[RK]ECAV;{I|L}{I|L}YQE[KC]RAV;{I|L}{I|L}Y[AG]E[RK]CAV;{I|L}{I|L}YQ[RK]ECG{I|L};{I|L}{I|L}YQE[KC]RG{I|L};{I|L}{I|L}YQ[RK]EC(Carbamidomethyl (C)){I|L};{I|L}{I|L}Y[AG]E[RK]CG{I|L} 6.4259;6.0685;5.9207;5.8746;5.7889;5.6757;5.5172;5.4315;5.3694;5.3183 -;-;-;-;-;-;-;-;-;- 6370 + 1 2.221 140552.6 0.6299999952316284 3386 4292 7674 SUDHL4_400M_050219_1,7680 SUDHL4_400M_050219_1,7680,LLYQEGAKMAV True True LLYQEGAKMAV 40.794224 611.829516589642 591481.6875 7674.0 ENSG00000173801|ENST00000393931|JUP 5.8311411539713545 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7681 40.801 368.0 159000.0 25 0 27908.0 40525 VIVVKAPP 8 95 411.7747406203271 821.5349283074543 2 411.7745544314384 MULTI CID FTMS 0 0 0 7674 93181.1484375 0.1367525678397675 6 -0.4521560668945312 7 Unmodified _VIVVKAPP_ ENSG00000112242|ENST00000346618|E2F3;nc|ENSG00000112242|O00716-2|E2F3 2.577480529830294 0.808687252328423 5 {I|L} 1 7 9.1487 0.0 0.0 1.1136 0.0 0.0 690.4398640758121 0.0 690.4398640758121 0.0 5.169291336304838 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1136 + + 10 + 1 2.221 49152.0 1.0 3387 4292 7674 SUDHL4_400M_050219_1,7681 SUDHL4_400M_050219_1,7681,VIVVKAPP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7683 40.806 38.0 1123700.0 25 0 48911.0 -1 0 77 910.4225609480326 1818.830568962865 2 910.9236328005792 MULTI CID FTMS 0 0 0 7682 952153.75 0.24600921287503 5 -0.3939971923828125 1 5 {I|L}DAN 4 -1 20.433 0.0 0.0 1.1234 0.0 0.0 455.1748815622776 947.4365328424436 1402.6114144047212 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DAN 1.1234 - 146 + 1 2.22 33996.4 1.0 3388 4293 7682 SUDHL4_400M_050219_1,7683 SUDHL4_400M_050219_1,7683, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7684 40.808 114.0 477640.0 25 0 73681.0 + 12969 HAIPPTLAM 9 73 475.7597802154014 949.5050074976028 2 475.7602416872978 MULTI CID FTMS 0 0 0 7682 458509.90625 0.3338061469055665 42 -2.6976852416992188 2 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 32.116972079565 0.1225432171549407 5 [HA]{I|L}P[TP]{I|L}AM 9 0 + 31.048 0.0 0.0 3.2699 3.2699 80.245 0.0 0.0 0.0 5.079015433336171 12.402953031565858 5.079015433336171 7.402953031565861 0 0.8935078169319297 0.0 0.5 0.0 + + [HA]{I|L}P[TP]{I|L}AM;[YG]{I|L}[TP]P[R{M(Oxidation (M))|F}];[YG]{I|L}[TP][R{I|L}]M;[{I|L}T]{M(Oxidation (M))|F}[RV]{I|L}AM 3.2699;2.4903;2.4903;1.4511 +;-;-;- + 83 1 2.22 46798.2 1.0 3389 4293 7682 SUDHL4_400M_050219_1,7684 SUDHL4_400M_050219_1,7684,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7685 40.814 317.0 560510.0 25 0 56387.0 + 33188 SFFEEDFD 8 169 518.1991438339774 1034.3837347347546 2 518.1995117068291 MULTI CID FTMS 0 0 0 7682 351372.96875 0.5790355078944254 -1 0.0581588745117187 3 Unmodified _SFFEEDFD_ REV__ENSG00000035664|ENST00000457488|DAPK2;REV__ENST00000558076.1_1_15:64216999-64218270:-|nuORF;REV__ENST00000559007.5_1_15:64204043-64263759:-|nuORF;REV__nc|ENSG00000035664|Q9UIK4-2|DAPK2 13.50788311687929 0.7113601687236069 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 5 -1 36.299 0.0 0.0 3.5092 0.0 0.0 0.0 390.0555819147094 390.0555819147094 14.660677999045715 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F} 3.5092 - 252 + 1 2.22 133352.4 1.0 3390 4293 7682 SUDHL4_400M_050219_1,7685 SUDHL4_400M_050219_1,7685,SFFEEDFD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7686 40.816 100.0 554900.0 25 0 36139.0 + -1 RSPDFASSF 9 99 507.23823307806873 1012.4619132229376 2 507.2381164431572 MULTI CID FTMS 0 0 0 7682 276880.15625 0.3510507514049891 -1 0.0581588745117187 4 Carbamidomethyl (C) _INC(Carbamidomethyl (C))GTKSSF_ ENSG00000185043|ENST00000328649|CIB1;nc|ENSG00000185043|Q99828-2|CIB1 20.453626601364224 0.2830276176381075 5 {[TV]|[{I|L}S]}C[W{I|L}]ASS{M(Oxidation (M))|F} 9 -1 + 35.634 0.0 0.0 3.5196 3.5196 79.567 0.0 0.0 0.0 0.2332911937518815 18.6445818267146 0.2332911937518815 5.848121326462561 0 0.8935078169319297 0.8860566476931632 0.4247425010840047 0.0 {[TV]|[{I|L}S]}C[W{I|L}]ASS{M(Oxidation (M))|F};[AG]N{[NV]|[RG]}{M(Oxidation (M))|F}ASS{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]}{M(Oxidation (M))|F}ASS{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[DP]{M(Oxidation (M))|F}ASS{M(Oxidation (M))|F};[AG]GG{[NV]|[RG]}{M(Oxidation (M))|F}ASS{M(Oxidation (M))|F} 3.5196;2.942;2.8557;2.6949;2.0368 -;-;-;-;- 165 1 2.22 51733.8 1.0 3391 4293 7682 SUDHL4_400M_050219_1,7686 SUDHL4_400M_050219_1,7686,INCGTKSSF False False RSPDFASSF 40.816219 507.238116443157 8956105.0 7682.0 ENSG00000185043|ENST00000328649|CIB1;;nc|ENSG00000185043|Q99828-2|CIB1 6.541405359903972 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7687 40.823 360.0 287890.0 25 0 19719.0 + 31504 RQFMAETQF 9 123 579.2741767407701 1156.5338005483402 2 579.2739745974541 MULTI CID FTMS 0 0 0 7682 209187.484375 0.6369593552532118 -1 0.0581588745117187 5 Unmodified _RQFMAETQF_ ENSG00000135387|ENST00000341394|CAPRIN1;nc|ENSG00000135387|Q14444-2|CAPRIN1 38.17557092003332 0.0854718145212029 5 [AG]{M(Oxidation (M))|F}RMATEQ{M(Oxidation (M))|F} 10 5 + 73.599 0.0 0.0 6.3637 6.3637 82.057 0.0 0.0 0.0 7.95880017344075 16.53212513775344 7.95880017344075 0.796896906561031 0 0.7742275032520141 1.5228787452803376 0.4247425010840047 0.3807196863200844 [AG]{M(Oxidation (M))|F}RMATEQ{M(Oxidation (M))|F};[AG]{M(Oxidation (M))|F}RMAETQ{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RMATEQ{M(Oxidation (M))|F};[AG]R{M(Oxidation (M))|F}MATEQ{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RMAETQ{M(Oxidation (M))|F};[AG]{M(Oxidation (M))|F}RMATE[AG]{M(Oxidation (M))|F};[AG]R{M(Oxidation (M))|F}MAETQ{M(Oxidation (M))|F};[AG]{M(Oxidation (M))|F}RMATQE{M(Oxidation (M))|F};[AG]{M(Oxidation (M))|F}RMAET[AG]{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]T[KG]ATEQ{M(Oxidation (M))|F} 6.3637;6.2948;5.6756;5.633;5.6067;5.5713;5.5641;5.541;5.5024;5.2958 -;-;-;-;-;-;-;-;-;- 1892 1 2.22 84943.1 1.0 3392 4293 7682 SUDHL4_400M_050219_1,7687 SUDHL4_400M_050219_1,7687,RQFMAETQF True True RQFMAETQF 40.822713 579.273974597454 1766631.0 7682.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 7.597333590189616 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7688 40.827 240.0 308800.0 25 0 41699.0 13305 HKGRTGPV 8 113 426.2462427031752 850.4779324731503 2 426.2462341189384 MULTI CID FTMS 0 0 0 7682 183894.375 0.6937552454997017 -1 0.0581588745117187 6 Unmodified _HKGRTGPV_ nc|ENSG00000205022|A6NDY0-2|PABPN1L 2.889219685676258 0.8067950007271085 5 {M(Oxidation (M))|F} 1 8 13.495 0.0 0.0 1.5867 0.0 0.0 685.4314522258832 0.0 685.4314522258832 0.0 7.525749891599531 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.5867 - 29 + 1 2.22 62472.0 1.0 3393 4293 7682 SUDHL4_400M_050219_1,7688 SUDHL4_400M_050219_1,7688,HKGRTGPV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 7689 40.835 430.0 294000.0 25 0 24078.0 + 14527 IGTGGFVL 8 194 382.220068400061 762.425583866922 2 382.2200805544853 MULTI CID FTMS 0 0 0 7682 163949.359375 0.0420868428301208 14 -1.1924171447753906 7 Unmodified _IGTGGFVL_ REV__ENSG00000128607|ENST00000335420|KLHDC10;REV__nc|ENSG00000128607|Q6PID8-2|KLHDC10 2.577480529830294 0.808687252328423 5 {I|L} 1 -1 6.9897 0.0 0.0 0.91677 0.0 0.0 105.00866599758452 541.3100069635374 646.3186729611219 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.91677 + + 15 + 1 2.22 99043.1 1.0 3394 4293 7682 SUDHL4_400M_050219_1,7689 SUDHL4_400M_050219_1,7689,IGTGGFVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7690 40.849 800.0 209520.0 25 0 13800.0 + 2555 ASFDGRISVY 10 167 557.780262077241 1113.545971221282 2 557.7803222537041 MULTI CID FTMS 0 0 0 7682 108705.3359375 0.5357300496015719 -1 0.0581588745117187 8 Unmodified _ASFDGRISVY_ ENSG00000138674|ENST00000395310|SEC31A;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-5|SEC31A;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A 53.31671820480216 0.0606844387689228 5 AS{M(Oxidation (M))|F}DH 5 6 56.682 0.0 0.0 5.0903 0.0 0.0 0.0 553.3052424903251 553.3052424903251 1.8843833139670707 0.0 0.0 0.0 0 0.3252574989159953 1.2218487496163564 0.3252574989159953 0.0 AS{M(Oxidation (M))|F}DH 5.0903 - 1539 + 1 2.22 128435.7 0.6000000238418579 3395 4293 7682 SUDHL4_400M_050219_1,7690 SUDHL4_400M_050219_1,7690,ASFDGRISVY True True ASFDGRISVY 40.848669 557.780322253704 1101096.5 7682.0 nc|ENSG00000138674|O94979-8|SEC31A;;ENSG00000138674|ENST00000395310|SEC31A;;nc|ENSG00000138674|O94979-5|SEC31A;;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;;nc|ENSG00000138674|O94979-6|SEC31A;;nc|ENSG00000138674|O94979-9|SEC31A;;nc|ENSG00000138674|O94979-3|SEC31A;;nc|ENSG00000138674|O94979-2|SEC31A;;nc|ENSG00000138674|O94979-10|SEC31A;;nc|ENSG00000138674|O94979-7|SEC31A;;nc|ENSG00000138674|O94979-4|SEC31A 6.250313758850098 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7691 40.858 522.0 181260.0 25 0 15556.0 + 31318 RMFSDPSSF 9 128 537.2394377165626 1072.4643224999252 2 537.2393676638603 MULTI CID FTMS 0 0 0 7682 108863.1953125 1.0 0 0.0 9 Unmodified _RMFSDPSSF_ ENSG00000167394|ENST00000300849|ZNF668;nc|ENSG00000167394|Q96K58-2|ZNF668 45.69961567697781 0.0497987121815769 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WT]|[RM]}DPSS{M(Oxidation (M))|F} 9 3 + 60.512 0.0 0.0 5.6423 5.6423 84.266 0.0 0.0 0.0 4.101744650890495 14.973024840566469 4.101744650890495 4.101744650890495 0 0.9247425010840048 1.154901959985743 1.2614393726401687 0.4247425010840047 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WT]|[RM]}DPSS{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YN]DPSS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WT]|[RM]}DRD{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YN]DRD{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[WT]|[RM]}D[VG]D{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YN]D[VG]D{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YE]{[{M(Oxidation (M))|F}H]|[RQ]}S{M(Oxidation (M))|F};[VG]{M(Oxidation (M))|F}[WE]{[DS]|[MA]|[CV]|TT}S{M(Oxidation (M))|F};{[TV]|[{I|L}S]}C[WE]{[DS]|[MA]|[CV]|TT}S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))Q]P[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F} 5.6423;5.2598;4.2925;3.91;3.4289;3.0464;2.8081;2.5357;2.3607;1.9999 -;-;-;-;-;-;-;-;-;- 357 1 2.22 76353.4 1.0 3396 4293 7682 SUDHL4_400M_050219_1,7691 SUDHL4_400M_050219_1,7691,RMFSDPSSF True True RMFSDPSSF 40.857869 537.23936766386 636923.4375 7682.0 nc|ENSG00000167394|Q96K58-2|ZNF668;;ENSG00000167394|ENST00000300849|ZNF668 3.562118411064148 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7692 40.872 800.0 387190.0 25 0 21096.0 + 31316 RMFDGKFVVA 10 161 585.3097012794369 1168.6048496256738 2 585.3097411990166 MULTI CID FTMS 0 0 0 7682 102720.890625 0.2022663014503797 -1 0.0581588745117187 10 Unmodified _RMFDGKFVVA_ ENSG00000152332|ENST00000489294|UHMK1;nc|ENSG00000152332|Q8TAS1-3|UHMK1 74.19965305603844 0.0188013450058842 5 {[WT]|[RM]}{M(Oxidation (M))|F}DGK{M(Oxidation (M))|F}VVA 10 0 + 79.158 0.0 0.0 6.7737 6.7737 89.731 0.0 0.0 0.0 8.819459175083608 53.805832318038085 8.819459175083608 7.257724967479874 0 0.9876954943324544 0.0 1.2134679910804405 0.9802046884880936 + + {[WT]|[RM]}{M(Oxidation (M))|F}DGK{M(Oxidation (M))|F}VVA;{[WT]|[RM]}{M(Oxidation (M))|F}DGKV{M(Oxidation (M))|F}VA;[{M(Oxidation (M))|F}V]{[MG]|[TS]}DGK{M(Oxidation (M))|F}VVA;[{M(Oxidation (M))|F}V]{[MG]|[TS]}DGKV{M(Oxidation (M))|F}VA;[VS][{M(Oxidation (M))|F}T]DGK{M(Oxidation (M))|F}VVA;[VS][{M(Oxidation (M))|F}T]DGKV{M(Oxidation (M))|F}VA;{[WT]|[RM]}{M(Oxidation (M))|F}D[RK]{M(Oxidation (M))|F}VA;VV{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}K[QT]VA;VV{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}P]{M(Oxidation (M))|F}VA;{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}KKD{M(Oxidation (M))|F}VAV 6.7737;6.1527;5.7281;5.107;4.9115;4.2905;3.8418;3.5299;3.1228;2.8189 +;-;-;-;-;-;-;-;-;- + 1569 1 2.22 231637.2 0.6100000143051147 3397 4293 7682 SUDHL4_400M_050219_1,7692 SUDHL4_400M_050219_1,7692,RMFDGKFVVA True True RMFDGKFVVA 40.871703 585.309741199017 5348380.5 7682.0 nc|ENSG00000152332|Q8TAS1-3|UHMK1;;ENSG00000152332|ENST00000489294|UHMK1 8.614622751871744 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7693 40.875 161.0 230870.0 25 0 30722.0 + 39007 TVRRTQVG 8 67 458.76959543169136 915.5246379301828 2 458.7700988650322 MULTI CID FTMS 0 0 0 7682 137620.265625 0.6824788223208937 -1 0.0581588745117187 11 Unmodified _TVRRTQVG_ REV__ENSG00000178031|ENST00000380548|ADAMTSL1;REV__ENST00000380559.7_1_9:18706652-18908543:+|nuORF;REV__nc|ENSG00000178031|Q8N6G6-6|ADAMTSL1 2.889219685676258 0.8067950007271085 5 {I|L} 1 -1 9.0908 0.0 0.0 0.99296 0.0 0.0 784.4295736985406 0.0 784.4295736985406 0.0 8.712178490585547 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.99296 - 7 + 1 2.22 33935.5 1.0 3398 4293 7682 SUDHL4_400M_050219_1,7693 SUDHL4_400M_050219_1,7693,TVRRTQVG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7694 40.89 800.0 41987.0 25 0 2540.0 -1 0 50 1184.1897688416295 3549.547477125089 3 1184.857836902142 MULTI CID FTMS 0 0 0 7682 133420.75 1.0 0 0.0 12 5 SY 2 -1 12.206 0.0 0.0 0.34388 0.0 0.0 2883.297429372939 413.1322725885376 3296.4297019614764 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SY 0.34388 - 44 + 1 2.22 31102.7 0.5199999809265137 3399 4293 7682 SUDHL4_400M_050219_1,7694 SUDHL4_400M_050219_1,7694, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7696 40.895 55.0 1070900.0 25 0 183310.0 + 42861 VVLGPPAA 8 86 362.2222113975729 722.4298698619458 2 362.2221862673759 MULTI CID FTMS 0 0 0 7695 858008.125 0.0682825816046716 8 -0.7371902465820312 1 Unmodified _VVLGPPAA_ REV__ENST00000468758.1_1_2:134877558-135010718:+|nuORF;REV__ENST00000481801.5_1_2:134877633-135011843:+|nuORF 0.0 0.8243325171867699 5 P 1 -1 1.5938 0.0 0.0 0.22062 0.0 0.0 546.3248416410459 76.02495752506093 622.3497991661068 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.22062 + + 3 + 1 2.22 55835.1 1.0 3400 4294 7695 SUDHL4_400M_050219_1,7696 SUDHL4_400M_050219_1,7696,VVLGPPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7697 40.896 47.0 581260.0 25 0 45117.0 + 14504 IGNGVVRQT 9 63 472.27039470913707 942.5262364850742 2 472.2698242068291 MULTI CID FTMS 0 0 0 7695 904977.5625 0.8682014186091356 2 -0.1881675720214843 2 Unmodified _IGNGVVRQT_ REV__ENSG00000179399|ENST00000377067|GPC5 4.75600775471527 0.7486543447549536 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.22 27659.8 1.0 3401 4294 7695 SUDHL4_400M_050219_1,7697 SUDHL4_400M_050219_1,7697,IGNGVVRQT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7698 40.897 44.0 982010.0 25 0 65870.0 + 45317 YSHLPVSSL 9 81 501.7665395649517 1001.5185261967034 2 501.7664672732353 MULTI CID FTMS 0 0 0 7695 507173.375 0.5111444884775124 2 -0.1881675720214843 3 Unmodified _YSHLPVSSL_ ENSG00000113916|ENST00000406870|BCL6;nc|ENSG00000113916|P41182-2|BCL6 21.74664581756881 0.2544899275067181 5 S{I|L} 2 7 17.193 0.0 0.0 1.7167 0.0 0.0 783.3915405783425 0.0 783.3915405783425 0.0 4.0051499783199045 0.0 0.0 0 0.0 0.0 0.25 0.0 + S{I|L} 1.7167 + + 55 + 1 2.22 38643.0 1.0 3402 4294 7695 SUDHL4_400M_050219_1,7698 SUDHL4_400M_050219_1,7698,YSHLPVSSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7699 40.899 53.0 1105500.0 25 0 99944.0 + 8920 FAKPENIDL 9 104 523.7795344359253 1045.5445159386504 2 523.7782470583916 MULTI CID FTMS 0 0 0 7695 531503.375 0.9596111658581 1 -0.0962104797363281 4 Unmodified _FAKPENIDL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 26.020703789607367 0.2001090068861241 5 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}E{[QN]|[E{I|L}]|[KN]}PD{I|L} 9 4 + 35.829 0.0 0.0 3.4269 3.4269 78.388 0.0 0.0 0.0 18.729174216431804 1.4293756324406033 1.4293756324406033 4.46395015176066 0 1.1989700043360187 0.0 0.6549471895720984 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}E{[QN]|[E{I|L}]|[KN]}PD{I|L};[{M(Oxidation (M))|F}V][{I|L}T]{[QN]|[E{I|L}]|[KN]}PD{I|L};[EP]N{I|L}DK{[MS]|[{M(Oxidation (M))|F}A]}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QP]DK{[MS]|[{M(Oxidation (M))|F}A]}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}E{[QN]|[E{I|L}]|[KN]}PEV;[{I|L}T]E{[QN]|[E{I|L}]|[KN]}E{I|L}S{I|L};[{M(Oxidation (M))|F}V][{I|L}T]{[QN]|[E{I|L}]|[KN]}PEV;{[TV]|[{I|L}S]}H{[QC]|[C(Carbamidomethyl (C))A]}K{[MS]|[{M(Oxidation (M))|F}A]}{I|L};{[TV]|[{I|L}S]}H{I|L}[YT]{I|L}{[CP]|[EA]};{[TV]|[{I|L}S]}H{I|L}[MD]{[MS]|[{M(Oxidation (M))|F}A]}{I|L} 3.4269;2.9999;2.7571;2.5503;2.5285;2.3521;2.1015;2.0843;1.8207;1.7732 -;-;-;-;-;-;-;-;-;- 338 + 1 2.22 49051.8 1.0 3403 4294 7695 SUDHL4_400M_050219_1,7699 SUDHL4_400M_050219_1,7699,FAKPENIDL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7700 40.901 97.0 495600.0 25 0 54080.0 + 9462 FLDDNQIVT 9 90 532.7663963142959 1063.5182396953917 2 532.7667724490166 MULTI CID FTMS 0 0 0 7695 426923.0 0.3899242570237842 -1 0.0893058776855468 5 Unmodified _FLDDNQIVT_ ENSG00000078369|ENST00000378609|GNB1;ENST00000461893.5_1_1:1720336-1724757:-|nuORF;nc|ENSG00000078369|P62873-2|GNB1 41.8396318013385 0.0653578398400075 5 {[QN]|[E{I|L}]|[KN]}DD{I|L}{M(Oxidation (M))|F}{I|L}VT 9 3 + 38.751 0.0 0.0 3.6437 3.6437 76.28 0.0 0.0 0.0 7.504311474114338 20.870084772475863 7.504311474114338 2.218487496163561 0 0.8182503180159344 0.0 0.0 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}DD{I|L}{M(Oxidation (M))|F}{I|L}VT;{[QN]|[E{I|L}]|[KN]}DD{M(Oxidation (M))|F}{I|L}{I|L}VT;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[DN]Q{I|L}VT;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[DN][AG]{I|L}VT 3.6437;3.4351;2.1637;1.2978 -;-;+;- + 123 1 2.22 45880.4 1.0 3404 4294 7695 SUDHL4_400M_050219_1,7700 SUDHL4_400M_050219_1,7700,FLDDNQIVT True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7701 40.903 100.0 511330.0 25 0 85247.0 + 20282 LLDVARTSL 9 82 494.2954242216585 986.576295510117 2 494.2953369021416 MULTI CID FTMS 0 0 0 7695 422894.46875 1.0 0 0.0 6 Unmodified _LLDVARTSL_ ENSG00000132141|ENST00000314144|CCT6B;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B 36.506200033944 0.094635877243972 5 {I|L}{I|L}DVA 5 4 63.711 0.0 0.0 6.4578 0.0 0.0 0.0 472.25242029361567 472.25242029361567 50.21652514092061 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {I|L}{I|L}DVA 6.4578 + + 127 + 1 2.22 46715.3 1.0 3405 4294 7695 SUDHL4_400M_050219_1,7701 SUDHL4_400M_050219_1,7701,LLDVARTSL True True LLDVARTSL 40.903031 494.295336902142 1951972.875 7695.0 ENSG00000132141|ENST00000314144|CCT6B;;nc|ENSG00000132141|Q92526-2|CCT6B;;nc|ENSG00000132141|Q92526-3|CCT6B 4.089385906855266 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7702 40.907 204.0 407730.0 25 0 46247.0 + 37562 TLIDVPNL 8 98 442.7567544630159 0 442.7568237185478 PEAK CID FTMS 0 0 0 7695 324939.875 0.9763259128223762 -1 0.0893058776855468 7 Unmodified _TLIDVPNL_ REV__ENST00000509421.1_1_4:4896340-4896505:-|nuORF 5.760428011301431 0.5786759180849727 5 W 1 -1 1.9897 0.0 0.0 0.22521 0.0 0.0 459.2750007699787 235.11919580631096 694.3941965762897 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.22521 - 2 + 1 2.22 69400.2 1.0 3406 4294 7695 SUDHL4_400M_050219_1,7702 SUDHL4_400M_050219_1,7702,TLIDVPNL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7703 40.91 180.0 582020.0 25 0 80370.0 + 9706 FLTDREVRL 9 100 383.5521307137334 1147.6345627414005 3 383.5525390505791 MULTI CID FTMS 0 0 0 7695 231764.75 0.5582472813333794 -1 0.0893058776855468 8 Unmodified _FLTDREVRL_ ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2 20.580933911654288 0.2795815587326093 5 RC{I|L}{I|L}E 5 8 41.964 0.0 0.0 3.6566 0.0 0.0 515.3071766584 0.0 515.3071766584 0.0 29.489700043360187 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.4247425010840047 RC{I|L}{I|L}E 3.6566 - 118 1 2.22 89287.2 1.0 3407 4294 7695 SUDHL4_400M_050219_1,7703 SUDHL4_400M_050219_1,7703,FLTDREVRL False True FLTDREVRL 40.910383 383.552539050579 2142540.75 7695.0 ENSG00000134318|ENST00000315872|ROCK2;;ENSG00000067900|ENST00000399799|ROCK1 1.7869486113389332 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7704 40.915 236.0 396040.0 25 0 45887.0 + 36527 TAGRVLEL 8 109 429.7553384719992 857.4961240107984 2 429.7552978396416 MULTI CID FTMS 0 0 0 7695 179132.078125 0.8881840321450416 -1 0.0893058776855468 9 Unmodified _TAGRVLEL_ ENSG00000165934|ENST00000298875|CPSF2 21.53697664764585 0.591232569029014 5 [TA]{[NV]|[RG]}V{I|L}E{I|L} 8 0 + 35.926 0.0 0.0 4.1897 4.1897 86.765 0.0 0.0 0.0 13.759103962389004 22.39171188829532 13.759103962389004 15.476146931408294 0 0.8494850021680094 1.6989700043360187 0.2059771852360797 0.0 + + [TA]{[NV]|[RG]}V{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[RK]AE{I|L};{[CP]|[EA]}[RK]{I|L}E{I|L};[TA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KK[PG] 4.1897;2.3848;1.159;0.87863 +;-;-;- + 117 1 2.22 75291.9 1.0 3408 4294 7695 SUDHL4_400M_050219_1,7704 SUDHL4_400M_050219_1,7704,TAGRVLEL False True TAGRVLEL 40.914798 429.755297839642 1147668.5 7695.0 ENSG00000165934|ENST00000298875|CPSF2 0.9359953006108602 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7705 40.929 800.0 203820.0 25 0 17894.0 -1 0 130 599.6379018202879 1795.8918760610636 3 599.6358520388603 MULTI CID FTMS 0 0 0 7695 148111.328125 0.4232345894232128 -2 0.1474647521972656 10 5 DG{M(Oxidation (M))|F}{I|L}H{I|L}Q 7 -1 53.888 0.0 0.0 3.0006 0.0 0.0 967.4777088849625 0.0 967.4777088849625 0.0 26.88834160081172 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 DG{M(Oxidation (M))|F}{I|L}H{I|L}Q 3.0006 - 866 1 2.22 127212.0 0.7099999785423279 3409 4294 7695 SUDHL4_400M_050219_1,7705 SUDHL4_400M_050219_1,7705, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7706 40.933 238.0 286360.0 25 0 17780.0 + -1 AMYPDQVQL 9 116 540.7554764036511 1079.496399874102 2 540.7545654177666 MULTI CID FTMS 0 0 0 7695 146904.484375 0.8727196189765425 -2 0.1474647521972656 11 Oxidation (M) _AM(Oxidation (M))YPDQVQL_ nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21 15.847184025352805 0.4077185912009129 5 [MD][{M(Oxidation (M))|F}E]AQ 6 -1 17.113 0.0 0.0 1.5853 0.0 0.0 0.0 355.198915676255 355.198915676255 3.467874862246566 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MD][{M(Oxidation (M))|F}E]AQ 1.5853 - 382 1 2.22 62759.5 1.0 3410 4294 7695 SUDHL4_400M_050219_1,7706 SUDHL4_400M_050219_1,7706,AMYPDQVQL False False AMYPDQVQL 40.933102 540.754565417767 1689603.75 7695.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 6.525608539581299 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7707 40.939 306.0 182670.0 25 0 23406.0 28101 PPLLTTIS 8 100 421.2554324332798 840.4963119333596 2 421.2545654177666 MULTI CID FTMS 0 0 0 7695 84131.1953125 0.6806576559909423 -7 0.314453125 12 Unmodified _PPLLTTIS_ ENSG00000104859|ENST00000221455|CLASRP;nc|ENSG00000104859|Q8N2M8-3|CLASRP 2.577480529830294 0.808687252328423 5 {I|L} 1 7 10.969 0.0 0.0 1.3051 0.0 0.0 709.4012324429284 0.0 709.4012324429284 0.0 1.8204087070553496 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3051 + + 15 + 1 2.22 48557.0 1.0 3411 4294 7695 SUDHL4_400M_050219_1,7707 SUDHL4_400M_050219_1,7707,PPLLTTIS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7708 40.953 800.0 74717.0 25 0 8219.4 -1 0 86 874.9070950962428 1747.7996372592854 2 874.9081298708916 MULTI CID FTMS 0 0 0 7695 85828.9296875 0.2346351310552852 -9 0.479156494140625 13 5 [MN]P[QT]NEAQ 9 -1 45.142 0.0 0.0 2.5828 0.0 0.0 0.0 731.3502291315061 731.3502291315061 18.459471728614574 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.0 0.0 [MN]P[QT]NEAQ 2.5828 - 340 + 1 2.22 45118.0 0.5699999928474426 3412 4294 7695 SUDHL4_400M_050219_1,7708 SUDHL4_400M_050219_1,7708, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7709 40.959 268.0 332560.0 25 0 71215.0 + 37823 TLTEEGVIKV 10 104 544.8138481758735 1087.613143418547 2 545.3165161013603 MULTI CID FTMS 0 0 0 7695 177605.90625 0.5695720805115155 -1 0.0893058776855468 14 Unmodified _TLTEEGVIKV_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 16.274544907608252 0.5744709547479872 5 [{I|L}T]TEER{I|L} 7 4 48.448 0.0 0.0 4.4545 0.0 0.0 0.0 242.1514376276 242.1514376276 38.77027233483685 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]TEER{I|L} 4.4545 - 155 + 1 2.22 71296.8 1.0 3413 4294 7695 SUDHL4_400M_050219_1,7709 SUDHL4_400M_050219_1,7709,TLTEEGVIKV False True TLTEEGVIKV 40.958673 545.31651610136 2220450.5 7695.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 4.583148002624512 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7710 40.967 487.0 243320.0 25 0 35679.0 -1 0 116 575.3274682082325 574.3201917416325 1 575.3262817263603 MULTI CID FTMS 0 0 0 7695 126223.4609375 0.073384586469034 13 -1.1031112670898438 15 5 Y 1 -1 13.099 0.0 0.0 2.2808 0.0 0.0 393.2454979933887 0.0 393.2454979933887 0.0 0.7031686256740919 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.2808 - 45 + 1 2.22 93202.0 1.0 3414 4294 7695 SUDHL4_400M_050219_1,7710 SUDHL4_400M_050219_1,7710, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7711 40.972 282.0 235990.0 25 0 16999.0 + -1 SMMDPNHFL 9 114 554.2333676289772 553.2260911623772 1 554.2330200076103 MULTI CID FTMS 0 0 0 7695 122939.5546875 1.0 0 0.0 16 nc|ENSG00000024048|Q8IWV8-3|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2 5 AH{I|L}{M(Oxidation (M))|F} 4 -1 17.0 0.0 0.0 3.0729 0.0 0.0 66.96215791218033 0.0 66.96215791218033 0.0 3.354706403678872 0.0 0.0 0 0.0 0.0 0.0 0.0 AH{I|L}{M(Oxidation (M))|F} 3.0729 - 89 + 1 2.22 56376.3 1.0 3415 4294 7695 SUDHL4_400M_050219_1,7711 SUDHL4_400M_050219_1,7711, False False SMMDPNHFL 40.972489 554.23302000761 614896.25 7695.0 nc|ENSG00000024048|Q8IWV8-3|UBR2;;nc|ENSG00000024048|Q8IWV8|UBR2;;ENSG00000024048|ENST00000372901|UBR2 6.014321804046631 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7712 40.986 800.0 213190.0 25 0 18234.0 20187 LLAELHCL 8 138 911.501146630677 910.493870164077 1 912.5079833865166 MULTI CID FTMS 0 0 0 7695 111120.6875 1.0 0 0.0 17 Unmodified _LLAELHCL_ ENSG00000267221|ENST00000587304|C17orf113 5.760428011301431 0.7893668129297577 5 {I|L}{I|L}DS 4 6 11.448 0.0 0.0 1.2574 0.0 0.0 0.0 479.24381458229885 479.24381458229885 -2.1225724800981567 0.0 -2.1225724800981567 0.0 0 0.0 0.744727494896694 0.0 0.0 {I|L}{I|L}DS 1.2574 - 2139 1 2.22 119578.0 0.5400000214576721 3416 4294 7695 SUDHL4_400M_050219_1,7712 SUDHL4_400M_050219_1,7712,LLAELHCL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7714 40.991 71.0 710690.0 25 0 72076.0 + 1659 ALNEQIARL 9 74 514.2980350864258 1026.5815172396517 2 514.2985717654228 MULTI CID FTMS 0 0 0 7713 512750.84375 0.2329395750512244 1 -0.0919570922851562 1 Unmodified _ALNEQIARL_ ENSG00000080986|ENST00000261597|NDC80 45.69961567697781 0.0497987121815769 5 [{I|L}A]NEQ{I|L}AR{I|L} 9 0 + 83.708 0.0 0.0 8.1541 8.1541 94.333 0.0 0.0 0.0 67.90192973592997 11.962724883926654 11.962724883926654 9.208187539523747 0 1.1307196863200843 2.0 0.0 0.3807196863200844 + + [{I|L}A]NEQ{I|L}AR{I|L};[{I|L}A]NE[AG]{I|L}AR{I|L};[{I|L}A]GGEQ{I|L}AR{I|L};[{I|L}A]GGE[AG]{I|L}AR{I|L};[KS][DP]Q{I|L}AR{I|L};[KS]N[EP]{I|L}AR{I|L};[KS][DP][AG]{I|L}AR{I|L};[KS]GG[EP]{I|L}AR{I|L} 8.1541;7.2571;7.2571;6.3644;3.2239;2.4423;2.3269;1.5453 +;-;-;-;-;-;-;- + 167 + 1 2.22 43665.6 1.0 3417 4295 7713 SUDHL4_400M_050219_1,7714 SUDHL4_400M_050219_1,7714,ALNEQIARL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7715 40.993 30.0 1786400.0 25 0 326080.0 + 1174 AHRPHARL 8 76 479.2772729471975 956.539992961195 2 479.2774230837822 MULTI CID FTMS 0 0 0 7713 1343964.0 0.7590024356921985 1 -0.0919570922851562 2 Unmodified _AHRPHARL_ REV__ENST00000393927.8_1_19:8578166-8579021:-|nuORF 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.22 47932.2 1.0 3418 4295 7713 SUDHL4_400M_050219_1,7715 SUDHL4_400M_050219_1,7715,AHRPHARL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7716 40.994 28.0 2201800.0 25 0 164880.0 + 31168 RLPEAIEEV 9 59 528.2902764456614 1054.5659999581228 2 528.2902099490166 MULTI CID FTMS 0 0 0 7713 1803866.25 0.9450617256461564 -1 0.0962104797363281 3 Unmodified _RLPEAIEEV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 23.78978130925829 0.2284941198415988 5 A{I|L}EEV 5 4 44.949 0.0 0.0 4.2623 0.0 0.0 495.2799854962906 0.0 495.2799854962906 0.0 19.79818770663016 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 + A{I|L}EEV 4.2623 + + 81 1 2.22 52874.2 1.0 3419 4295 7713 SUDHL4_400M_050219_1,7716 SUDHL4_400M_050219_1,7716,RLPEAIEEV False True RLPEAIEEV 40.99376 528.290209949017 65981760.0 7713.0 ENST00000460882.5_1_9:37422710-37436776:+|nuORF;;ENST00000493368.5_1_9:37422710-37428742:+|nuORF;;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;;ENSG00000137106|ENST00000318158|GRHPR 5.789137840270996 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7717 40.995 39.0 1076100.0 25 0 188380.0 + 23550 LTLQRGSH 8 70 456.25663716561263 910.4987213980252 2 456.2564269900322 MULTI CID FTMS 0 0 0 7713 1111816.875 0.533072223165827 4 -0.294921875 4 Unmodified _LTLQRGSH_ REV__ENSG00000036257|ENST00000264414|CUL3;REV__nc|ENSG00000036257|Q13618-2|CUL3;REV__nc|ENSG00000036257|Q13618-3|CUL3 2.302733041254933 0.8103549651115762 5 E 1 -1 6.9897 0.0 0.0 0.76768 0.0 0.0 455.261307923219 323.17060266666255 778.4319105898816 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 E 0.76768 - 10 + 1 2.22 41472.7 1.0 3420 4295 7713 SUDHL4_400M_050219_1,7717 SUDHL4_400M_050219_1,7717,LTLQRGSH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7718 40.996 41.0 2632600.0 25 0 204140.0 + -1 ILGPPGSVY 9 98 902.9190966971146 1803.823640461029 2 902.9200927615166 MULTI CID FTMS 0 0 0 7713 1129701.75 0.6246622028390652 -1 0.0962104797363281 5 ENSG00000182247|ENST00000396703|UBE2E2;nc|ENSG00000170142|P51965-3|UBE2E1;nc|ENSG00000170142|P51965-2|UBE2E1;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000170035|ENST00000410062|UBE2E3;ENST00000493707.1_1_3:23907959-23932094:+|nuORF 5 [MN]PN{I|L}NEEC(Carbamidomethyl (C)){I|L}{I|L}V[KC]Q 15 -1 + 68.303 0.0 0.0 3.7865 3.7865 55.729 0.0 0.0 0.0 6.976212463643421 8.547564158959311 6.976212463643421 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.7302046884880937 [MN]PN{I|L}NEEC(Carbamidomethyl (C)){I|L}{I|L}V[KC]Q;[MN]PN{I|L}NEEC(Carbamidomethyl (C))V{I|L}{I|L}[KC]Q;[MN]PN{I|L}NEEQM{I|L}{I|L}[KC]Q;[MN]PN{I|L}NE[C(Carbamidomethyl (C))R]V[WM]{I|L}Q;[MN]PN{I|L}NEE[YV]Y[YK]Q;[NP]PSVY[WH]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}P{I|L}[PA]C(Carbamidomethyl (C))EEN{I|L}D[WH];[PG]GPSVY[WH]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[PG]G{I|L}P{I|L}[PA]C(Carbamidomethyl (C))EEN{I|L}D[WH];[PG]PGSVY[WH]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.7865;3.7865;3.7865;3.7763;3.3093;2.6099;2.5085;2.4367;2.3353;2.2698 -;-;-;-;-;-;-;-;-;- 2929 + 1 2.22 76912.3 1.0 3421 4295 7713 SUDHL4_400M_050219_1,7718 SUDHL4_400M_050219_1,7718, False False ILGPPGSVY 40.996143 902.920092761517 22351866.0 7713.0 ENSG00000182247|ENST00000396703|UBE2E2;;nc|ENSG00000170142|P51965-3|UBE2E1;;nc|ENSG00000170142|P51965-2|UBE2E1;;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;;ENSG00000170142|ENST00000306627|UBE2E1;;ENSG00000170035|ENST00000410062|UBE2E3;;ENST00000493707.1_1_3:23907959-23932094:+|nuORF 7.7058900197347 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7719 40.998 95.0 552310.0 25 0 104230.0 24120 LYLPVLAW 8 77 487.79051604004223 973.5664791468844 2 487.7906982302666 MULTI CID FTMS 0 0 0 7713 610918.0625 0.801144324574505 2 -0.1344985961914062 6 Unmodified _LYLPVLAW_ ENSG00000150556|ENST00000409642|LYPD6B;ENST00000498249.1_1_2:150061334-150071221:+|nuORF;nc|ENSG00000150556|Q8NI32|LYPD6B 2.889219685676258 0.8067950007271085 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.22 47309.3 1.0 3422 4295 7713 SUDHL4_400M_050219_1,7719 SUDHL4_400M_050219_1,7719,LYLPVLAW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7720 41.0 97.0 852520.0 25 0 102490.0 + 35969 SVQGIIIYR 9 85 524.8116649740674 1047.6087770149347 2 524.8113281130791 MULTI CID FTMS 0 0 0 7713 554153.5 1.0 0 0.0 7 Unmodified _SVQGIIIYR_ ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF 60.07390631473393 0.0260411565414776 5 [VS]QG{I|L}{I|L}{I|L}YR 9 0 + 93.087 0.0 0.0 8.8857 8.8857 95.002 0.0 0.0 0.0 75.46774379777631 17.900742479681128 17.900742479681128 9.208187539523747 0 1.1307196863200843 2.0 0.0 1.1936726795685342 + + [VS]QG{I|L}{I|L}{I|L}YR;[VS][AG]G{I|L}{I|L}{I|L}YR;{[TV]|[{I|L}S]}H{I|L}{I|L}{I|L}GQ[PA];[VS]QG{I|L}{I|L}[HV][VP];{I|L}{I|L}[HS]{I|L}{I|L}GQ[PA];{[TV]|[{I|L}S]}H{I|L}{I|L}{I|L}G[AG][PA];[VS][AG]G{I|L}{I|L}[HV][VP];{I|L}{I|L}[HS]{I|L}{I|L}G[AG][PA];{I|L}{I|L}G[{I|L}V][HT]Q[PA] 8.8857;8.0067;5.3434;5.1896;4.7123;4.1052;3.9513;3.4741;1.7237 +;-;-;-;-;-;-;-;- + 161 + 1 2.22 69577.1 1.0 3423 4295 7713 SUDHL4_400M_050219_1,7720 SUDHL4_400M_050219_1,7720,SVQGIIIYR True True SVQGIIIYR 41.000316 524.811328113079 3312177.75 7713.0 ENSG00000169100|ENST00000381401|SLC25A6;;ENST00000435239.1_1_7:32511604-32512018:+|nuORF;;ENSG00000005022|ENST00000317881|SLC25A5;;ENSG00000151729|ENST00000281456|SLC25A4;;ENST00000406156.2_1_6:121975405-121975696:+|nuORF 8.812710444132486 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7721 41.003 107.0 607390.0 25 0 83007.0 + 31053 RLIEQEEYL 9 76 596.8141421245093 1191.6137313158183 2 596.8140136599541 MULTI CID FTMS 0 0 0 7713 467256.3125 1.0 0 0.0 8 Unmodified _RLIEQEEYL_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 29.84058131909904 0.1515068451768857 5 [R{I|L}]{I|L}EQEEY{I|L} 9 0 + 61.208 0.0 0.0 5.1366 5.1366 87.425 0.0 0.0 0.0 2.632192780232785 44.72865638833312 2.632192780232785 9.208187539523747 0 0.8807196863200843 0.0 0.0 0.3807196863200844 + + [R{I|L}]{I|L}EQEEY{I|L};[R{I|L}]{I|L}E[AG]EEY{I|L} 5.1366;4.3638 +;- + 124 1 2.22 53824.1 1.0 3424 4295 7713 SUDHL4_400M_050219_1,7721 SUDHL4_400M_050219_1,7721,RLIEQEEYL False True RLIEQEEYL 41.002599 596.814013659954 2627845.25 7713.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 6.2652889887491865 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7722 41.006 191.0 711550.0 25 0 19621.0 + -1 ALSELTQGV 9 129 917.4306871341378 1832.846821335076 2 917.4344360232352 MULTI CID FTMS 0 0 0 7713 353819.53125 0.1918608848132299 2 -0.1344985961914062 9 ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B 5 [MN]PN{I|L}D{[{M(Oxidation (M))|F}C]|[YS]}VGEP{I|L}G{I|L}{[QS]|[NT]} 17 -1 + 91.995 0.0 0.0 5.0192 5.0192 82.621 0.0 0.0 0.0 14.305000558102236 4.36021203545711 4.36021203545711 4.36021203545711 0 1.2302046884880935 1.3010299956639813 1.9645591924310528 2.7614393726401687 [MN]PN{I|L}D{[{M(Oxidation (M))|F}C]|[YS]}VGEP{I|L}G{I|L}{[QS]|[NT]};[MN]PN{I|L}D{[{M(Oxidation (M))|F}C]|[YS]}VGQT{I|L}AD[VP];[MN]PN{I|L}D{[{M(Oxidation (M))|F}C]|[YS]}VGPE{I|L}G{I|L}{[QS]|[NT]};[MN]PN{I|L}D{[{M(Oxidation (M))|F}C]|[YS]}VWP{I|L}G{I|L}{[QS]|[NT]};[MN]PN{I|L}DE[HT]GQ{I|L}H{I|L}{[QS]|[NT]};[MN]PGG{I|L}D{[{M(Oxidation (M))|F}C]|[YS]}VGEP{I|L}G{I|L}{[QS]|[NT]};[MN]PN{I|L}D[WY]GEP{I|L}G{I|L}{[QS]|[NT]};[MN]PN{I|L}DEC[R{M(Oxidation (M))|F}]P{I|L}G{I|L}{[QS]|[NT]};[MN]PN{I|L}DE[YG]WP{I|L}G{I|L}{[QS]|[NT]};[MN]PN{I|L}D{[{M(Oxidation (M))|F}C]|[YS]}VG{I|L}[EP]G{I|L}{[QS]|[NT]} 5.0192;4.7814;4.7714;4.5437;4.5311;4.5283;4.4421;4.3708;4.3336;4.2969 -;-;-;-;-;-;-;-;-;- 39486 + 1 2.22 91084.8 1.0 3425 4295 7713 SUDHL4_400M_050219_1,7722 SUDHL4_400M_050219_1,7722, False False ALSELTQGV 41.006297 917.434436023235 3309704.75 7713.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 6.73222001393636 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7723 41.008 66.0 565680.0 25 0 74872.0 23589 LTPAFPRSL 9 77 501.2911205594207 1000.5676881856414 2 501.2900878787041 MULTI CID FTMS 0 0 0 7713 312136.34375 0.3918222973932996 6 -0.4909782409667969 10 Unmodified _LTPAFPRSL_ ENSG00000120733|ENST00000314358|KDM3B;nc|ENSG00000120733|Q7LBC6-2|KDM3B 15.847184025352805 0.4077185912009129 5 {I|L} 1 8 13.495 0.0 0.0 1.3487 0.0 0.0 869.4729749061477 0.0 869.4729749061477 0.0 -0.9421249706470292 -0.9421249706470292 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3487 + + 43 + 1 2.22 32238.1 1.0 3426 4295 7713 SUDHL4_400M_050219_1,7723 SUDHL4_400M_050219_1,7723,LTPAFPRSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7724 41.014 309.0 360030.0 25 0 36614.0 + 14358 IEVDPDTKEML 11 104 645.3191107143098 1288.6236684954197 2 645.3183471560478 MULTI CID FTMS 0 0 0 7713 216433.203125 0.4934087025458713 -1 0.0962104797363281 11 Unmodified _IEVDPDTKEML_ ENSG00000182774|ENST00000647841|RPS17;ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF 50.13029200064056 0.116908488078412 5 {I|L}EVYVDN{[HG]|PP}M{I|L} 11 5 + 77.037 0.0 0.0 5.9782 5.9782 87.812 0.0 0.0 0.0 45.6009420312464 1.926452912887868 1.926452912887868 7.743296201132367 0 1.805462187404089 1.6989700043360187 1.0994850021680094 0.0 {I|L}EVYVDN{[HG]|PP}M{I|L};{I|L}EVDPEE[KS]M{I|L};{[QN]|[E{I|L}]|[KN]}VDNM{I|L}[DP]M{I|L};{I|L}EVYVDGG{[HG]|PP}M{I|L};{[QN]|[E{I|L}]|[KN]}VDNDVM{[QN]|[E{I|L}]|[KN]}{I|L};{[QN]|[E{I|L}]|[KN]}VDNDV{[QN]|[E{I|L}]|[KN]}M{I|L};{I|L}EV[{M(Oxidation (M))|F}V]MN{[HG]|PP}M{I|L};{[QN]|[E{I|L}]|[KN]}VDNMDV{[QN]|[E{I|L}]|[KN]}{I|L};{[QN]|[E{I|L}]|[KN]}VDNMD[{I|L}P]M{I|L};{[QN]|[E{I|L}]|[KN]}VDNDMV{[QN]|[E{I|L}]|[KN]}{I|L} 5.9782;5.3773;5.3527;5.2698;5.2141;5.2141;5.129;5.1191;5.1191;4.8459 -;-;-;-;-;-;-;-;-;- 1954 + 1 2.22 88439.2 1.0 3427 4295 7713 SUDHL4_400M_050219_1,7724 SUDHL4_400M_050219_1,7724,IEVDPDTKEML True True IEVDPDTKEML 41.013531 645.318347156048 2171359.25 7713.0 ENST00000561068.5_3_15:83205554-83208094:-|nuORF;;ENSG00000182774|ENST00000647841|RPS17;;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;;ENST00000396783.2_1_6:29457050-29457287:-|nuORF 6.036322434743245 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7725 41.018 234.0 154880.0 25 0 9395.0 -1 ADAGIRRV 8 78 450.25637703021147 898.498201127223 2 450.2568237185478 MULTI CID FTMS 0 0 0 7713 170092.953125 0.818390999370905 -2 0.185516357421875 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADAGIRRV_ ENSG00000166197|ENST00000605788|NOLC1;nc|ENSG00000166197|Q14978-2|NOLC1;nc|ENSG00000166197|Q14978-3|NOLC1 0.7936320650641473 0.8195151834710337 5 S 1 -1 10.379 0.0 0.0 1.1551 0.0 0.0 793.4552304014402 0.0 793.4552304014402 0.0 0.7008935158251806 0.0 0.0 0 0.0 0.0 0.0 0.0 S 1.1551 - 6 + 1 2.22 36923.0 1.0 3428 4295 7713 SUDHL4_400M_050219_1,7725 SUDHL4_400M_050219_1,7725,ADAGIRRV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7726 41.026 448.0 238810.0 25 0 9900.1 + 13449 HLRDYFEEY 9 102 636.288546587865 1270.5625402425298 2 636.2866699099541 MULTI CID FTMS 0 0 0 7713 142898.765625 1.0 0 0.0 13 Unmodified _HLRDYFEEY_ ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000491091.1_1_3:122036542-122036854:+|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1 59.36838082759317 0.0264317782606298 5 [H{I|L}]RDY{M(Oxidation (M))|F}EEY 9 0 + 87.387 0.0 0.0 6.8778 6.8778 95.495 0.0 0.0 0.0 18.74143652831457 47.784628560750654 18.74143652831457 26.81872208767465 0 1.305462187404089 1.3979400086720375 0.4247425010840047 0.3252574989159953 + + [H{I|L}]RDY{M(Oxidation (M))|F}EEY;[H{I|L}]RDY[HM]HY 6.8778;4.7671 +;- + 163 1 2.22 85190.6 1.0 3429 4295 7713 SUDHL4_400M_050219_1,7726 SUDHL4_400M_050219_1,7726,HLRDYFEEY True True HLRDYFEEY 41.025868 636.286669909954 924802.9375 7713.0 ENSG00000122566|ENST00000618183|HNRNPA2B1;;nc|ENSG00000122566|P22626|HNRNPA2B1;;ENST00000491091.1_1_3:122036542-122036854:+|nuORF;;ENST00000463181.5_1_7:26232138-26237376:-|nuORF 7.3833327293396 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7727 41.03 221.0 205900.0 25 0 16093.0 5490 DLSGHLLAYL 10 77 551.301662232229 0 551.3005859255791 PEAK CID FTMS 0 0 0 7713 137098.359375 1.0 0 0.0 14 Unmodified _DLSGHLLAYL_ ENSG00000167130|ENST00000372546|DOLPP1;nc|ENSG00000167130|Q86YN1-2|DOLPP1 9.38312468134398 0.3794934366477728 5 YKQ 3 10 23.258 0.0 0.0 2.1132 0.0 0.0 131.0946876080156 547.2702241537138 678.3649117617294 0.0 0.0 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 YKQ 2.1132 - 27 + 1 2.22 40979.5 1.0 3430 4295 7713 SUDHL4_400M_050219_1,7727 SUDHL4_400M_050219_1,7727,DLSGHLLAYL False True KLDEHIAYL 41.030052 551.300585925579 718203.8125 7713.0 ENSG00000186871|ENST00000334463|ERCC6L 3.817833344141642 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7728 41.038 452.0 218680.0 25 0 11642.0 + 15076 IMKNPEVEF 9 140 553.7816411516808 1105.5487293701617 2 553.7819091677666 MULTI CID FTMS 0 0 0 7713 114948.1875 1.0 0 0.0 15 Unmodified _IMKNPEVEF_ ENSG00000186184|ENST00000302979|POLR1D 26.268140514670165 0.1969607489560049 5 {I|L}M{I|L}{[{M(Oxidation (M))|F}D]|MM}AH{I|L}{M(Oxidation (M))|F} 9 6 + 42.928 0.0 0.0 3.883 3.883 76.962 0.0 0.0 0.0 17.382509153564133 4.397285225147272 4.397285225147272 2.3265715086464667 0 0.6307196863200843 1.5228787452803376 0.0 0.0 {I|L}M{I|L}{[{M(Oxidation (M))|F}D]|MM}AH{I|L}{M(Oxidation (M))|F};{I|L}MY[WP]H{I|L}{M(Oxidation (M))|F};{I|L}M{I|L}[W{M(Oxidation (M))|F}]H{I|L}{M(Oxidation (M))|F};{I|L}M{[QN]|[E{I|L}]|[KN]}{[CT]|[{M(Oxidation (M))|F}G]}H{I|L}{M(Oxidation (M))|F};{I|L}M{I|L}{[{M(Oxidation (M))|F}D]|MM}AH{M(Oxidation (M))|F}{I|L};{I|L}MY[WP]H{M(Oxidation (M))|F}{I|L};{I|L}M{I|L}[W{M(Oxidation (M))|F}]H{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}PS[YQ]SVVV;{I|L}M{[QN]|[E{I|L}]|[KN]}{[CT]|[{M(Oxidation (M))|F}G]}H{M(Oxidation (M))|F}{I|L};{I|L}[C(Carbamidomethyl (C))K]{[MS]|[{M(Oxidation (M))|F}A]}AH{I|L}{M(Oxidation (M))|F} 3.883;3.6725;3.5849;3.2419;2.9235;2.7131;2.6254;2.2955;2.2825;1.9194 -;-;-;-;-;-;-;-;-;- 1610 + 1 2.22 79608.6 1.0 3431 4295 7713 SUDHL4_400M_050219_1,7728 SUDHL4_400M_050219_1,7728,IMKNPEVEF False True IMKNPEVEF 41.038075 553.781909167767 714407.25 7713.0 ENSG00000186184|ENST00000302979|POLR1D 3.681525707244873 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7729 41.049 653.0 171190.0 25 0 20039.0 + 33623 SIRAKIYAP 9 158 509.8039351943095 1017.593317455419 2 509.8033935427666 MULTI CID FTMS 0 0 0 7713 106157.1484375 0.413660237431904 7 -0.6409797668457031 16 Unmodified _SIRAKIYAP_ REV__ENSG00000139865|ENST00000553443|TTC6;REV__nc|ENSG00000139865|Q86TZ1-2|TTC6;REV__nc|ENSG00000139865|Q86TZ1|TTC6 4.75600775471527 0.7486543447549536 5 {[TV]|[{I|L}S]}{[MG]|[TS]}C 5 -1 11.361 0.0 0.0 1.1164 0.0 0.0 0.0 523.3826905845783 523.3826905845783 0.251608940799656 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.1923877696554315 0.0 {[TV]|[{I|L}S]}{[MG]|[TS]}C 1.1164 - 140 1 2.22 87847.9 1.0 3432 4295 7713 SUDHL4_400M_050219_1,7729 SUDHL4_400M_050219_1,7729,SIRAKIYAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7730 41.064 800.0 93767.0 25 0 15631.0 + + 21026 KTIGGGDDSFNTF 13 98 679.815678103424 1357.616803273648 2 679.8147460818291 MULTI CID FTMS 0 0 0 7713 96078.3125 1.0 0 0.0 17 Unmodified _LNYHYNCLATF_ ENSG00000123416|ENST00000336023|TUBA1B;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENSG00000152086|ENST00000312988|TUBA3E;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;ENSG00000167553|ENST00000301072|TUBA1C;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;ENSG00000167552|ENST00000301071|TUBA1A;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000198033|P0DPH7-2|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B 12.240655878213236 0.7805268987462184 5 {[QS]|[NT]}{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 4 -1 25.52 0.0 0.0 1.8798 0.0 0.0 0.0 832.4018123891354 832.4018123891354 2.1349281074461857 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.25 {[QS]|[NT]}{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 1.8798 - 93 1 2.22 61563.8 0.6000000238418579 3433 4295 7713 SUDHL4_400M_050219_1,7730 SUDHL4_400M_050219_1,7730,LNYHYNCLATF False False KTIGGGDDSFNTF 41.064451 679.814746081829 639925.625 7713.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;;ENSG00000152086|ENST00000312988|TUBA3E;;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;;ENSG00000167553|ENST00000301072|TUBA1C;;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;;ENSG00000167552|ENST00000301071|TUBA1A;;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;;ENSG00000075886|ENST00000321253|TUBA3D;;ENSG00000198033|ENST00000400113|TUBA3C;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000198033|P0DPH7-2|TUBA3C;;nc|ENSG00000123416|P68363-2|TUBA1B 5.361129999160767 2.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7731 41.078 800.0 130270.0 25 0 6691.0 -1 0 96 1009.1044456785842 3024.2915076359523 3 1009.43565672636 MULTI CID FTMS 0 0 0 7713 94899.8828125 1.0 0 0.0 18 5 DET 3 -1 16.682 0.0 0.0 0.55161 0.0 0.0 2377.07991203224 299.07113504566166 2676.1510470779017 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0 0.0 DET 0.55161 - 351 + 1 2.22 73494.8 0.550000011920929 3434 4295 7713 SUDHL4_400M_050219_1,7731 SUDHL4_400M_050219_1,7731, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7733 41.084 101.0 364000.0 25 0 24756.0 -1 INCGTKSSF 9 70 507.23823307806873 1012.4619132229376 2 507.2383605837822 MULTI CID FTMS 0 0 0 7732 200659.40625 0.2544120037152047 2 -0.1165237426757812 1 Carbamidomethyl (C) _INC(Carbamidomethyl (C))GTKSSF_ ENSG00000112200|ENST00000370706|ZNF451;ENST00000444273.6_1_6:56954967-57015704:+|nuORF;nc|ENSG00000112200|Q9Y4E5-2|ZNF451 19.256988751693697 0.3154191944385105 5 {M(Oxidation (M))|F}ASS{M(Oxidation (M))|F} 5 -1 30.63 0.0 0.0 3.0253 0.0 0.0 455.21296889472814 0.0 455.21296889472814 0.0 13.349621957594092 0.0 0.0 0 0.8182503180159344 0.0 0.5 0.0 {M(Oxidation (M))|F}ASS{M(Oxidation (M))|F} 3.0253 - 112 1 2.222 35569.1 1.0 3435 4296 7732 SUDHL4_400M_050219_1,7733 SUDHL4_400M_050219_1,7733,INCGTKSSF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7734 41.086 71.0 680000.0 25 0 69970.0 + 42556 VTPMHGLL 8 82 434.2420607950487 866.4695686568974 2 434.2423889040947 MULTI CID FTMS 0 0 0 7732 534987.9375 0.8155917794879759 2 -0.1165237426757812 2 Unmodified _VTPMHGLL_ REV__ENSG00000126226|ENST00000337344|PCID2;REV__nc|ENSG00000126226|Q5JVF3-2|PCID2;REV__nc|ENSG00000126226|Q5JVF3-3|PCID2;REV__nc|ENSG00000126226|Q5JVF3-4|PCID2 5.760428011301431 0.7893668129297577 5 {I|L} 1 -1 10.485 0.0 0.0 1.21 0.0 0.0 735.3747943422475 0.0 735.3747943422475 0.0 9.51544993495972 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.21 + + 11 + 1 2.222 45999.3 1.0 3436 4296 7732 SUDHL4_400M_050219_1,7734 SUDHL4_400M_050219_1,7734,VTPMHGLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7735 41.089 121.0 557170.0 25 0 69350.0 + 42078 VQVVRWAA 8 100 464.7702805603327 927.5260081874654 2 464.7702514529228 MULTI CID FTMS 0 0 0 7732 406285.0 0.4845754653443219 3 -0.2029647827148437 3 Unmodified _VQVVRWAA_ REV__ENST00000260570.7_1_2:27712549-27712609:-|nuORF 2.577480529830294 0.808687252328423 5 P 1 -1 10.837 0.0 0.0 1.1684 0.0 0.0 812.4621710676397 0.0 812.4621710676397 0.0 5.960500493144272 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.1684 - 11 + 1 2.222 57130.9 1.0 3437 4296 7732 SUDHL4_400M_050219_1,7735 SUDHL4_400M_050219_1,7735,VQVVRWAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7736 41.092 157.0 474990.0 25 0 66349.0 + 31029 RLGPVPPGL 9 75 453.2824988289448 904.5504447246896 2 453.2819396853447 MULTI CID FTMS 0 0 0 7732 321012.59375 0.9881504515474164 2 -0.1165237426757812 4 Unmodified _RLGPVPPGL_ ENSG00000146833|ENST00000349062|TRIM4;nc|ENSG00000146833|Q9C037-3|TRIM4;nc|ENSG00000146833|Q9C037|TRIM4 21.74664581756881 0.2544899275067181 5 AP[PG]{I|L} 5 5 22.843 0.0 0.0 2.5254 0.0 0.0 451.29368310535216 0.0 451.29368310535216 0.0 12.385606273598311 0.0 0.0 0 1.0 0.0 0.0 0.0 AP[PG]{I|L} 2.5254 - 36 + 1 2.222 61173.6 1.0 3438 4296 7732 SUDHL4_400M_050219_1,7736 SUDHL4_400M_050219_1,7736,RLGPVPPGL False True RLGPVPPGL 41.091605 453.281939685345 10198498.0 7732.0 nc|ENSG00000146833|Q9C037|TRIM4;;nc|ENSG00000146833|Q9C037-3|TRIM4;;ENSG00000146833|ENST00000349062|TRIM4 5.043101628621419 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7737 41.094 144.0 460630.0 25 0 67648.0 + 12970 HAIPPTLAM 9 98 475.7597802154014 949.5050074976028 2 475.7602416872978 MULTI CID FTMS 0 0 0 7732 304398.59375 0.2216094359535124 45 -2.477031707763672 5 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 32.116972079565 0.1225432171549407 5 [{I|L}A]HP[TP]{I|L}AM 9 2 + 47.069 0.0 0.0 4.9572 4.9572 88.666 0.0 0.0 0.0 13.010299956639804 11.0827208845118 11.0827208845118 13.010299956639804 0 0.8935078169319297 1.6989700043360187 0.5 0.0 [{I|L}A]HP[TP]{I|L}AM;[HA]{I|L}P[TP]{I|L}AM;[H{I|L}]AP[TP]{I|L}AM;[YG]{I|L}[TP]P[R{M(Oxidation (M))|F}];[YG]{I|L}[TP][R{I|L}]M;[YG]{I|L}HA[YK]V;[YG]{I|L}[TP]{[WT]|[RM]}{I|L} 4.9572;3.587;2.9529;2.8073;2.8073;1.3881;1.2366 -;+;-;-;-;-;- + 245 1 2.222 56961.2 1.0 3439 4296 7732 SUDHL4_400M_050219_1,7737 SUDHL4_400M_050219_1,7737,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7738 41.1 294.0 450010.0 25 0 30805.0 11545 GIQHGCQDIG 10 146 514.2357804246936 1026.4570079161872 2 514.2360107302666 MULTI CID FTMS 0 0 0 7732 258783.65625 0.7678556774846984 -2 0.1881675720214843 6 Unmodified _GIQHGCQDIG_ ENSG00000106348|ENST00000338791|IMPDH1;ENST00000469328.5_1_7:128033063-128040541:-|nuORF;ENST00000484496.5_1_7:128032984-128040541:-|nuORF;nc|ENSG00000106348|P20839-2|IMPDH1;nc|ENSG00000106348|P20839-3|IMPDH1;nc|ENSG00000106348|P20839-4|IMPDH1;nc|ENSG00000106348|P20839-5|IMPDH1;nc|ENSG00000106348|P20839-7|IMPDH1;nc|ENSG00000106348|P20839|IMPDH1 10.823927491677226 0.6659270209832991 5 NEQ{I|L}AR{I|L} 7 8 27.688 0.0 0.0 2.6975 0.0 0.0 183.9969687792116 0.0 183.9969687792116 0.0 -1.4414830631468334 -1.4414830631468334 0.0 0 0.0 0.0 0.0 0.3054621874040891 NEQ{I|L}AR{I|L} 2.6975 - 866 + 1 2.222 102788.9 1.0 3440 4296 7732 SUDHL4_400M_050219_1,7738 SUDHL4_400M_050219_1,7738,GIQHGCQDIG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7739 41.103 141.0 400620.0 25 0 35290.0 + 35112 SQWDSPMRV 9 81 553.2582053093929 1104.5018576855855 2 553.2586547732353 MULTI CID FTMS 0 0 0 7732 251078.046875 0.4619406919597169 -2 0.1881675720214843 7 Unmodified _SQWDSPMRV_ ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B 43.77239144664712 0.0547478964384323 5 {[QS]|[NT]}WDSP 6 3 49.882 0.0 0.0 4.5163 0.0 0.0 0.0 401.1962374322876 401.1962374322876 38.773043837969325 0.0 0.0 0.0 0 0.9247425010840048 1.2218487496163564 0.0 0.0 + {[QS]|[NT]}WDSP 4.5163 + + 85 + 1 2.222 47739.3 1.0 3441 4296 7732 SUDHL4_400M_050219_1,7739 SUDHL4_400M_050219_1,7739,SQWDSPMRV True True SQWDSPMRV 41.102722 553.258654773235 2763089.5 7732.0 ENSG00000132549|ENST00000357162|VPS13B;;nc|ENSG00000132549|Q7Z7G8|VPS13B;;nc|ENSG00000132549|Q7Z7G8-6|VPS13B 6.69578234354655 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7740 41.117 800.0 99619.0 25 0 4636.0 -1 0 107 846.3783977372183 1690.7422425412365 2 846.3788940310478 MULTI CID FTMS 0 0 0 7732 88148.5078125 0.9257403106458082 -1 0.0919570922851562 8 5 [YQ]SDEAQQNA{M(Oxidation (M))|F} 11 -1 64.124 0.0 0.0 3.7926 0.0 0.0 0.0 406.1821618333053 406.1821618333053 27.34093775814158 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 1.0138793319624575 [YQ]SDEAQQNA{M(Oxidation (M))|F} 3.7926 - 1561 1 2.222 57722.9 0.550000011920929 3442 4296 7732 SUDHL4_400M_050219_1,7740 SUDHL4_400M_050219_1,7740, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7741 41.121 225.0 302430.0 25 0 16001.0 -1 0 96 910.4225609480326 1818.830568962865 2 910.919970691204 MULTI CID FTMS 0 0 0 7732 250120.890625 0.0646240624754749 8 -0.7351799011230469 9 5 [NP]{I|L}{M(Oxidation (M))|F}{I|L}N[HN]DAD{I|L}NP[EP] 16 -1 + 63.948 0.0 0.0 3.5159 3.5159 78.735 0.0 0.0 0.0 15.354678725883574 45.82142973709276 15.354678725883574 4.771212547196626 0 0.242992819099939 0.7695510786217261 0.0 0.0 [NP]{I|L}{M(Oxidation (M))|F}{I|L}N[HN]DAD{I|L}NP[EP];[NP]{I|L}{M(Oxidation (M))|F}{I|L}N[HN]DANNNP[EP];[NP]{I|L}{M(Oxidation (M))|F}{I|L}N[HN]WD{I|L}NP[EP];[NP]{I|L}{M(Oxidation (M))|F}{I|L}N[HN]DW{I|L}NP[EP];{[QS]|[NT]}[RN]VN[HN]DAD{I|L}NP[EP];[NP]{I|L}{M(Oxidation (M))|F}{I|L}N[HN]WNNN[WH];{[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}{I|L}N[HN]DAD{I|L}NP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PN{I|L}DAD[RN]W{M(Oxidation (M))|F}{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PMEN[HN]DAN{I|L}DP[EP];{[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}{I|L}N[HN]DANNNP[EP] 3.5159;3.2536;3.147;3.147;2.5461;2.5168;2.4803;2.3924;2.3688;2.218 -;-;-;-;-;-;-;-;-;- 1571 1 2.222 52722.1 1.0 3443 4296 7732 SUDHL4_400M_050219_1,7741 SUDHL4_400M_050219_1,7741, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7743 41.137 800.0 117880.0 25 0 5053.2 + 28866 QAKPGCPAERL 11 143 585.3097012794369 1168.6048496256738 2 585.3102905154228 MULTI CID FTMS 0 0 0 7742 62980.0234375 0.1240131031619096 3 -0.2713737487792969 1 Unmodified _QAKPGCPAERL_ REV__ENST00000455854.2_1_6:43491608-43492751:-|nuORF 15.248480904072842 0.7179608125786238 5 [{M(Oxidation (M))|F}E]{[WS]|[C(Carbamidomethyl (C)){I|L}]}GK{M(Oxidation (M))|F}VG{I|L} 10 -1 + 15.267 0.0 0.0 1.3064 1.3064 74.27 0.0 0.0 0.0 0.5192435809753739 2.1682713250046426 0.5192435809753739 3.010299956639809 0 0.3945990182825422 0.0 0.5 0.0 [{M(Oxidation (M))|F}E]{[WS]|[C(Carbamidomethyl (C)){I|L}]}GK{M(Oxidation (M))|F}VG{I|L};[YQ][WE]K{M(Oxidation (M))|F}VG{I|L};[YQ]{[NV]|[RG]}{[ET]|[MV]}{M(Oxidation (M))|F}VG{I|L};[YQ][{I|L}V]{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}VG{I|L};[{M(Oxidation (M))|F}E][YQ][WK]VG{I|L} 1.3064;1.0489;0.58624;0.24131;0.16696 -;-;-;-;- 269 1 2.222 75525.7 0.5799999833106995 3444 4297 7742 SUDHL4_400M_050219_1,7743 SUDHL4_400M_050219_1,7743,QAKPGCPAERL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7744 41.138 36.0 1493700.0 25 0 205520.0 19073 LDRGLDIYV 9 71 532.2927610034816 1062.570969073763 2 532.2927734255791 MULTI CID FTMS 0 0 0 7742 701653.0625 0.3694851867905607 -2 0.1344985961914062 2 Unmodified _LDRGLDIYV_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 19.256988751693697 0.3154191944385105 5 {I|L}YV 3 6 34.45 0.0 0.0 3.2422 0.0 0.0 669.3455914168609 0.0 669.3455914168609 0.0 18.464263880637564 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 + {I|L}YV 3.2422 + + 42 1 2.222 47507.4 1.0 3445 4297 7742 SUDHL4_400M_050219_1,7744 SUDHL4_400M_050219_1,7744,LDRGLDIYV False True RLPNSTIYV 41.13839 532.292773425579 0.0 7742.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENSG00000132182|ENST00000254508|NUP210 2.238529900709788 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7745 41.141 102.0 558340.0 25 0 39718.0 + 12054 GQEFIRVGY 9 92 534.7775804064524 1067.5406078797048 2 534.7773315310478 MULTI CID FTMS 0 0 0 7742 297668.375 0.1810111614632084 -2 0.1344985961914062 3 Unmodified _GQEFIRVGY_ ENSG00000105011|ENST00000263382|ASF1B;ENSG00000111875|ENST00000229595|ASF1A 56.17704186161178 0.0281986971544335 5 {[QG]|[NA]}E{M(Oxidation (M))|F}{I|L}RVGY 9 0 + 67.902 0.0 0.0 6.3606 6.3606 92.934 0.0 0.0 0.0 58.29821036923505 13.46787486224656 13.46787486224656 14.436974992327125 0 1.305462187404089 0.6777807052660807 0.4247425010840047 0.0 + + {[QG]|[NA]}E{M(Oxidation (M))|F}{I|L}RVGY;{[QG]|[NA]}E{M(Oxidation (M))|F}{I|L}RRY;{[QG]|[NA]}E{M(Oxidation (M))|F}{I|L}R[YG]V;[WQ]{M(Oxidation (M))|F}{I|L}[KP]SY;{[TV]|[{I|L}S]}[RH]{I|L}EE{[QG]|[NA]} 6.3606;5.0083;3.9918;2.5704;1.0653 +;-;-;-;- + 140 + 1 2.222 50076.6 1.0 3446 4297 7742 SUDHL4_400M_050219_1,7745 SUDHL4_400M_050219_1,7745,GQEFIRVGY True True GQEFIRVGY 41.14059 534.777331531048 8835383.0 7742.0 ENSG00000111875|ENST00000229595|ASF1A;;ENSG00000105011|ENST00000263382|ASF1B 6.584304650624593 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7746 41.144 158.0 253860.0 25 0 12535.0 20171 LKRSPLGY 8 78 467.2776929968521 0 467.2773925662041 PEAK CID FTMS 0 0 0 7742 239033.296875 1.0 0 0.0 4 Unmodified _LKRSPLGY_ ENST00000367941.6_1_6:132779201-132779417:-|nuORF 5.760428011301431 0.5786759180849727 5 D 1 8 11.237 0.0 0.0 1.205 0.0 0.0 466.3116102519973 348.1683138483032 814.4799241003004 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.25 0.0 D 1.205 - 8 + 1 2.222 36804.0 1.0 3447 4297 7742 SUDHL4_400M_050219_1,7746 SUDHL4_400M_050219_1,7746,LKRSPLGY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7747 41.158 800.0 185780.0 25 0 15316.0 14909 ILLKDDDDDSD 11 134 632.2831927928825 1262.5518326525648 2 632.2831298708916 MULTI CID FTMS 0 0 0 7742 136283.96875 1.0 0 0.0 5 Unmodified _ILLKDDDDDSD_ ENSG00000127952|ENST00000359697|STYXL1;nc|ENSG00000127952|Q9Y6J8-2|STYXL1;nc|ENSG00000127952|Q9Y6J8-3|STYXL1;nc|ENSG00000127952|Q9Y6J8-5|STYXL1 17.11289562659939 0.6791789249425932 5 {I|L}{I|L}{I|L}EP 5 8 54.125 0.0 0.0 4.2869 0.0 0.0 0.0 694.1800020807249 694.1800020807249 36.47309037280159 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.805462187404089 0.0 {I|L}{I|L}{I|L}EP 4.2869 - 426 + 1 2.222 118275.1 0.7099999785423279 3448 4297 7742 SUDHL4_400M_050219_1,7747 SUDHL4_400M_050219_1,7747,ILLKDDDDDSD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7748 41.167 546.0 389700.0 25 0 65303.0 + 15785 ISEENFRVM 9 160 562.7739406572144 1123.5333283812288 2 562.7742797732353 MULTI CID FTMS 0 0 0 7742 126973.765625 0.0437371866838218 -2 0.1344985961914062 6 Unmodified _ISEENFRVM_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 114.6490535036381 0.0036024293994099 5 {I|L}SEEN{M(Oxidation (M))|F}RVM 9 0 + 115.7 0.0 0.0 10.298 10.298 95.556 0.0 0.0 0.0 89.43980756793765 11.8740810491245 11.8740810491245 9.208187539523747 0 1.5044321917401078 2.0 1.274227503252014 0.6307196863200843 + + {I|L}SEEN{M(Oxidation (M))|F}RVM;{I|L}SEEGG{M(Oxidation (M))|F}RVM;{I|L}SE{[YD]|[{M(Oxidation (M))|F}M]}V[HV]Y;{I|L}S{M(Oxidation (M))|F}[DV][WQ]VM;{[TV]|[{I|L}S]}EE[QA][{M(Oxidation (M))|F}T]S{I|L};{I|L}SE{[YD]|[{M(Oxidation (M))|F}M]}V[KA]CP;{I|L}SE{[YD]|[{M(Oxidation (M))|F}M]}V[KC]AP;[{M(Oxidation (M))|F}T]R{M(Oxidation (M))|F}N[DV][EP];EES{I|L}[QA][{M(Oxidation (M))|F}T]S{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}E[QA][{M(Oxidation (M))|F}T]S{I|L} 10.298;9.4781;5.2656;4.9737;4.7956;4.5099;4.3822;2.9533;2.7804;2.3597 +;-;-;-;-;-;-;-;-;- + 1260 + 1 2.222 159538.2 1.0 3449 4297 7742 SUDHL4_400M_050219_1,7748 SUDHL4_400M_050219_1,7748,ISEENFRVM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7749 41.175 426.0 233970.0 25 0 14177.0 + 32229 RVYVDITTY 9 120 565.2986576592203 1128.5827623852406 2 565.2994262576103 MULTI CID FTMS 0 0 0 7742 119867.6796875 1.0 0 0.0 7 Unmodified _RVYVDITTY_ ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT 45.69961567697781 0.0497987121815769 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KA[QA]{I|L}TTY 10 6 + 63.664 0.0 0.0 5.6411 5.6411 84.574 0.0 0.0 0.0 4.420080530223132 13.521825181113629 4.420080530223132 4.420080530223132 0 1.5 0.958607314841775 1.0 0.3494850021680094 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KA[QA]{I|L}TTY;VVYDR{I|L}TTY;VVYRD{I|L}TTY;VVDYR{I|L}TTY;{[QN]|[E{I|L}]|[KN]}AYR{I|L}TTY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KANVVTTY;VVYD[VG]{I|L}TTY;VVY[VG]D{I|L}TTY;VVDY[VG]{I|L}TTY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}KAN[W{I|L}]TY 5.6411;5.2494;5.1793;5.1527;4.6879;4.4859;4.1239;4.0537;4.0272;3.9071 -;-;-;-;-;-;-;-;-;- 1373 1 2.222 78686.2 1.0 3450 4297 7742 SUDHL4_400M_050219_1,7749 SUDHL4_400M_050219_1,7749,RVYVDITTY True True RVYVDITTY 41.174734 565.29942625761 642242.0 7742.0 nc|ENSG00000124155|Q969N2-2|PIGT;;nc|ENSG00000124155|Q969N2-6|PIGT;;nc|ENSG00000124155|Q969N2-3|PIGT;;nc|ENSG00000124155|Q969N2-4|PIGT;;ENSG00000124155|ENST00000279036|PIGT;;nc|ENSG00000124155|Q969N2-5|PIGT 5.1927181879679365 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7750 41.189 800.0 126160.0 25 0 18536.0 + -1 QVLNSDELQ 9 103 1045.0109287780692 2088.0073046229386 2 1045.514819324017 MULTI CID FTMS 0 0 0 7742 82207.2578125 0.6567872857067689 -3 0.2307090759277343 8 ENST00000398078.7_1_21:45161468-45175941:+|nuORF;ENSG00000160209|ENST00000291565|PDXK;nc|ENSG00000160209|O00764-2|PDXK 5 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}[{I|L}T]VN 9 -1 55.595 0.0 0.0 2.6626 0.0 0.0 0.0 1056.4302531915512 1056.4302531915512 28.780469900409088 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.2887254899964357 1.6861818737241734 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}[{I|L}T]VN 2.6626 - 1372 1 2.222 76786.5 0.5199999809265137 3451 4297 7742 SUDHL4_400M_050219_1,7750 SUDHL4_400M_050219_1,7750, False False QVLNSDELQ 41.188598 1045.0138 3572678.5 7742.0 ENST00000398078.7_1_21:45161468-45175941:+|nuORF;;ENSG00000160209|ENST00000291565|PDXK;;nc|ENSG00000160209|O00764-2|PDXK 2.5060681651035943 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7751 41.191 63.0 1304300.0 25 0 164350.0 + 45567 YVDPVNKVL 9 103 523.7974107366732 1045.5802685401463 2 523.7984496951103 MULTI CID FTMS 0 0 0 7742 310461.03125 0.1698964554973087 -2 0.1344985961914062 9 Unmodified _YVDPVNKVL_ ENSG00000140992|ENST00000342085|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;nc|ENSG00000140992|O15530-4|PDPK1 53.832793166522166 0.0319663582346103 5 [YV]D[VP]NKV{I|L} 9 0 + 50.816 0.0 0.0 4.86 4.86 82.225 0.0 0.0 0.0 2.499795900778224 2.499795900778224 2.499795900778224 4.409547537030036 0 2.048455006504028 2.0 0.0 0.3252574989159953 + + [YV]D[VP]NKV{I|L};[YV]YKVYV{I|L};[YV]D[VP]NK{I|L}V;{[QN]|[E{I|L}]|[KN]}VPVDYV{I|L};[YV]D[VP]GGKV{I|L};[YV]D[VP]GGK{I|L}V;[YV][{M(Oxidation (M))|F}V]V[HA]V{I|L};{[QN]|[E{I|L}]|[KN]}VPDVYV{I|L};[YV]Y[YV]KV{I|L};{[QN]|[E{I|L}]|[KN]}VVPDYV{I|L} 4.86;4.4383;4.4275;4.1827;3.9794;3.5468;3.4493;3.4191;3.3665;3.2381 +;-;-;-;-;-;-;-;-;- + 452 + 1 2.222 67252.2 1.0 3452 4297 7742 SUDHL4_400M_050219_1,7751 SUDHL4_400M_050219_1,7751,YVDPVNKVL True True YVDPVNKVL 41.191325 523.79844969511 10069043.0 7742.0 ENSG00000140992|ENST00000342085|PDPK1;;nc|ENSG00000140992|O15530-3|PDPK1;;nc|ENSG00000140992|O15530-4|PDPK1;;nc|ENSG00000140992|O15530-2|PDPK1 5.635948657989502 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7752 41.195 181.0 333150.0 25 0 22708.0 8076 EPAVLRWV 8 96 485.2789166908255 0 485.2799865603447 PEAK CID FTMS 0 0 0 7742 86650.671875 1.0 0 0.0 10 Unmodified _EPAVLRWV_ ENST00000472018.5_1_16:89760510-89761152:+|nuORF 13.50788311687929 0.5021269579892848 5 MVA 3 7 8.6721 0.0 0.0 0.89538 0.0 0.0 441.2992141416135 223.07273279361564 664.3719469352292 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MVA 0.89538 - 109 + 1 2.222 50972.4 1.0 3453 4297 7742 SUDHL4_400M_050219_1,7752 SUDHL4_400M_050219_1,7752,EPAVLRWV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7754 41.2 68.0 467150.0 25 0 53808.0 + 1770 ALRSQLQQ 8 60 472.27039470913707 942.5262364850742 2 472.2704040408134 MULTI CID FTMS 0 0 0 7753 619792.5 0.5946056013331299 6 -0.6186561584472656 1 Unmodified _ALRSQLQQ_ REV__ENSG00000196935|ENST00000355086|SRGAP1;REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF;REV__nc|ENSG00000196935|Q7Z6B7-2|SRGAP1 5.230669730166228 0.792582437072536 5 P 1 -1 6.9897 0.0 0.0 0.74159 0.0 0.0 471.2607479057952 371.1945589654906 842.4553068712859 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.74159 - 3 + 1 2.222 32668.0 1.0 3454 4298 7753 SUDHL4_400M_050219_1,7754 SUDHL4_400M_050219_1,7754,ALRSQLQQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7755 41.212 715.0 228580.0 25 0 19790.0 -1 0 119 599.6379018202879 1795.8918760610636 3 599.6357299685478 MULTI CID FTMS 0 0 0 7753 200882.296875 0.574029937592139 2 -0.1973915100097656 2 5 [H{I|L}][NP]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q 15 -1 + 98.444 0.0 0.0 5.4816 5.4816 87.117 0.0 0.0 0.0 8.808135922807907 0.0 0.0 8.808135922807907 0 1.5356668758921828 1.6989700043360187 0.5 1.079689690656103 [H{I|L}][NP]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}PH[VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}{[YC]|[HE]}Q[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}K;[Q{I|L}][YG]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP]{I|L}H[VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[Q{I|L}]N{I|L}{[YC]|[HE]}Q[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}[C(Carbamidomethyl (C))K][YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}[C(Carbamidomethyl (C))Q][YG]G{M(Oxidation (M))|F}{I|L}H{I|L}K 5.4816;4.9912;4.7131;4.3233;4.2686;4.065;4.0452;3.9533;3.9049;3.9049 -;-;-;-;-;-;-;-;-;- 2834 1 2.222 126995.9 1.0 3455 4298 7753 SUDHL4_400M_050219_1,7755 SUDHL4_400M_050219_1,7755, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7756 41.213 17.0 4810200.0 25 0 860270.0 + 43350 WNPRRWWRWCW 11 82 866.417095834612 0 866.4167358279228 PEAK CID FTMS 0 0 0 7753 2274596.0 1.0 0 0.0 3 Unmodified _WNPRRWWRWCW_ ENST00000564348.5_1_19:7982609-7983760:+|nuORF;ENST00000566166.1_1_19:7982552-7983971:+|nuORF 0.0 0.4761840153648598 5 PN{I|L}NADQ 7 10 47.995 0.0 0.0 2.773 0.0 0.0 245.09057973694308 730.3608492486936 975.4514289856368 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 1.1989700043360187 PN{I|L}NADQ 2.773 - 278 + 1 2.222 60402.1 1.0 3456 4298 7753 SUDHL4_400M_050219_1,7756 SUDHL4_400M_050219_1,7756,WNPRRWWRWCW False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7757 41.226 725.0 200160.0 25 0 22745.0 2018 APENYGHG 8 177 422.6822392691527 843.3499256051053 2 422.6823913455009 MULTI CID FTMS 0 0 0 7753 156549.484375 1.0 0 0.0 4 Unmodified _APENYGHG_ ENSG00000042832|ENST00000220616|TG;nc|ENSG00000042832|P01266-2|TG 2.577480529830294 0.808687252328423 5 {I|L}V 2 8 19.464 0.0 0.0 2.3079 0.0 0.0 613.1861815638929 0.0 613.1861815638929 0.0 6.984615597275408 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}V 2.3079 - 75 + 1 2.222 114395.1 1.0 3457 4298 7753 SUDHL4_400M_050219_1,7757 SUDHL4_400M_050219_1,7757,APENYGHG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7758 41.23 216.0 272420.0 25 0 19572.0 + 20665 AQPKGVLLY 9 110 494.2954242216585 986.576295510117 2 494.7964965701103 MULTI CID FTMS 0 0 0 7753 159504.125 0.6130700291278806 3 -0.2824974060058594 5 Unmodified _LLQQPLIY_ nc|ENSG00000087191|P62195-2|PSMC5;ENST00000581764.1_1_17:61907522-61908306:+|nuORF;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;ENSG00000087191|ENST00000310144|PSMC5 10.183394434864962 0.7604730176254005 5 {I|L}Y 2 6 20.969 0.0 0.0 2.1254 0.0 0.0 692.4181972208577 0.0 692.4181972208577 0.0 9.186363512511502 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L}Y 2.1254 + + 102 + 1 2.222 54014.5 1.0 3458 4298 7753 SUDHL4_400M_050219_1,7758 SUDHL4_400M_050219_1,7758,LLQQPLIY False False AQPKGVLLY 41.229857 494.79649657011 2581661.75 7753.0 nc|ENSG00000087191|P62195-2|PSMC5;;ENST00000581764.1_1_17:61907522-61908306:+|nuORF;;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;;ENSG00000087191|ENST00000310144|PSMC5 0.8814640442530314 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7759 41.234 194.0 289280.0 25 0 22947.0 + -1 LTMPGPNCGL 10 103 538.2482191994482 1074.4818854656962 2 538.2481567263603 MULTI CID FTMS 0 0 0 7753 142843.296875 0.8823298175148526 -1 0.0739822387695312 6 Carbamidomethyl (C),Oxidation (M) _LTM(Oxidation (M))PGPNC(Carbamidomethyl (C))GL_ REV__ENSG00000147592|ENST00000276590|LACTB2 10.823927491677226 0.6659270209832991 5 {[TV]|[{I|L}S]}HDA{I|L} 6 -1 28.945 0.0 0.0 2.6938 0.0 0.0 0.0 435.1351054261774 435.1351054261774 -4.928151518707963 0.0 -4.928151518707963 0.0 0 0.0 0.744727494896694 0.3494850021680094 0.0 {[TV]|[{I|L}S]}HDA{I|L} 2.6938 - 247 1 2.222 49419.8 1.0 3459 4298 7753 SUDHL4_400M_050219_1,7759 SUDHL4_400M_050219_1,7759,LTMPGPNCGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7760 41.241 411.0 259360.0 25 0 41895.0 + -1 YSYFSPRTM 9 105 576.2638312515893 1150.5131095699785 2 576.2639037966728 MULTI CID FTMS 0 0 0 7753 140308.59375 0.9894605196465168 -1 0.0739822387695312 7 2 Carbamidomethyl (C) _YSC(Carbamidomethyl (C))LLPC(Carbamidomethyl (C))APA_ ENSG00000121152|ENST00000240423|NCAPH;chr2:96335848-96341675|38|14.97|0.71|4.39|+|ENST00000435975|NCAPH,NCAPH;ENST00000477409.1_1_2:97001567-97024936:+|nuORF;nc|ENSG00000121152|Q15003-2|NCAPH 28.486842064014134 0.328649637529545 5 YSY{M(Oxidation (M))|F}S[RP]TM 9 -1 + 70.643 0.0 0.0 6.1401 6.1401 84.099 0.0 0.0 0.0 54.40539744339371 1.5645578805436315 1.5645578805436315 2.902793180650562 0 0.0 2.0 0.6694451763165201 0.4247425010840047 YSY{M(Oxidation (M))|F}S[RP]TM;YSY{M(Oxidation (M))|F}SWW{I|L};YSY{M(Oxidation (M))|F}WWS{I|L};YSY{M(Oxidation (M))|F}WWTV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{M(Oxidation (M))|F}S{M(Oxidation (M))|F}Y[MT];[VS]AV{M(Oxidation (M))|F}S{M(Oxidation (M))|F}Y[MT];{[{M(Oxidation (M))|F}C]|[YS]}[RP]S{M(Oxidation (M))|F}[MT]Y;{[{M(Oxidation (M))|F}C]|[YS]}[RP]S{M(Oxidation (M))|F}Y[MT];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{M(Oxidation (M))|F}S{M(Oxidation (M))|F}[MT]Y;[VS]AV{M(Oxidation (M))|F}S{M(Oxidation (M))|F}[MT]Y 6.1401;5.8878;4.9196;4.7322;3.0368;2.8206;2.6507;2.6309;2.2529;2.0368 -;-;-;-;-;-;-;-;-;- 166 + 1 2.222 81888.9 1.0 3460 4298 7753 SUDHL4_400M_050219_1,7760 SUDHL4_400M_050219_1,7760,YSCLLPCAPA False False YSYFSPRTM 41.24093 576.263903796673 1230702.125 7753.0 ENSG00000121152|ENST00000240423|NCAPH;;chr2:96335848-96341675|38|14.97|0.71|4.39|+|ENST00000435975|NCAPH,NCAPH;;ENST00000477409.1_1_2:97001567-97024936:+|nuORF;;nc|ENSG00000121152|Q15003-2|NCAPH 8.073253949483236 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7761 41.255 800.0 131870.0 25 0 5525.8 -1 LDMFENGNY 9 143 559.7284511348304 0 559.7280151247978 PEAK CID FTMS 0 0 0 7753 137956.953125 1.0 0 0.0 8 Oxidation (M) _LDM(Oxidation (M))FENGNY_ ENSG00000176678|ENST00000320241|FOXL1 7.289230182591677 0.3433663536648894 5 EN{M(Oxidation (M))|F}GEC{I|L} 7 -1 38.523 0.0 0.0 3.4474 0.0 0.0 197.03614586050168 125.07248865299064 322.1086345134923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.7614393726401688 EN{M(Oxidation (M))|F}GEC{I|L} 3.4474 - 910 + 1 2.222 83273.8 0.6499999761581421 3461 4298 7753 SUDHL4_400M_050219_1,7761 SUDHL4_400M_050219_1,7761,LDMFENGNY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7762 41.26 300.0 245000.0 25 0 15933.0 + 11875 GLTVEPLGV 9 121 442.7567544630159 0 442.7568847537041 PEAK CID FTMS 0 0 0 7753 127088.890625 0.3818558037822728 3 -0.2824974060058594 9 Unmodified _GLTVEPLGV_ REV__ENSG00000113790|ENST00000231887|EHHADH;REV__ENST00000475987.1_1_3:184944632-184971810:-|nuORF;REV__nc|ENSG00000113790|Q08426-2|EHHADH 8.593279151180031 0.3284076903191179 5 {I|L} 1 -1 6.9897 0.0 0.0 0.79114 0.0 0.0 174.14154740083808 593.2513521783811 767.3928995792191 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.79114 + + 19 + 1 2.222 60074.1 1.0 3462 4298 7753 SUDHL4_400M_050219_1,7762 SUDHL4_400M_050219_1,7762,GLTVEPLGV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7763 41.265 194.0 213700.0 25 0 17160.0 + 44377 YLTDRVMTV 9 82 549.2871572977798 1096.5597616623595 2 549.2875854372978 MULTI CID FTMS 0 0 0 7753 129754.7890625 0.8920889860296114 -1 0.0739822387695312 10 Unmodified _YLTDRVMTV_ ENSG00000171720|ENST00000305264|HDAC3;ENST00000469550.6_1_5:141001037-141014565:-|nuORF;nc|ENSG00000171720|O15379-2|HDAC3 20.41453444215458 0.284085796332423 5 Y{I|L}V 3 6 45.177 0.0 0.0 4.1199 0.0 0.0 0.0 718.3200167291624 718.3200167291624 17.01230272322281 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 Y{I|L}V 4.1199 - 285 + 1 2.222 39293.7 1.0 3463 4298 7753 SUDHL4_400M_050219_1,7763 SUDHL4_400M_050219_1,7763,YLTDRVMTV False True YLTDRVMTV 41.265144 549.287585437298 1808888.75 7753.0 nc|ENSG00000171720|O15379-2|HDAC3;;ENSG00000171720|ENST00000305264|HDAC3;;ENST00000469550.6_1_5:141001037-141014565:-|nuORF 3.603219946225485 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7764 41.268 116.0 489330.0 25 0 63859.0 + 14560 IHPADSVYL 9 90 507.7671320224172 0 507.7669555544853 PEAK CID FTMS 0 0 0 7753 101680.5390625 0.5048107303361286 -2 0.1165237426757812 11 Unmodified _IHPADSVYL_ ENSG00000122741|ENST00000377724|DCAF10;nc|ENSG00000122741|Q5QP82-2|DCAF10 12.531546534597751 0.2832320739326029 5 VPSD 4 7 22.167 0.0 0.0 2.1871 0.0 0.0 294.15807840150154 318.15720544986567 612.3152838513672 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 VPSD 2.1871 - 67 + 1 2.222 48774.9 1.0 3464 4298 7753 SUDHL4_400M_050219_1,7764 SUDHL4_400M_050219_1,7764,IHPADSVYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7765 41.281 800.0 126510.0 25 0 8189.7 -1 0 118 898.9515116987003 1795.8884704642005 2 898.9520751833916 MULTI CID FTMS 0 0 0 7753 100452.390625 0.748729311237369 1 -0.0864410400390625 12 5 [{I|L}A]VVQVAE 8 -1 29.981 0.0 0.0 1.6694 0.0 0.0 0.0 983.400042079688 983.400042079688 16.616329089168538 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5994850021680094 [{I|L}A]VVQVAE 1.6694 - 3173 1 2.222 72987.8 0.5199999809265137 3465 4298 7753 SUDHL4_400M_050219_1,7765 SUDHL4_400M_050219_1,7765, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7767 41.286 53.0 1117200.0 25 0 219240.0 37363 TKPRQQLS 8 83 479.2772729471975 956.539992961195 2 479.2775756716728 MULTI CID FTMS 0 0 0 7766 992444.0625 0.5604818735663756 5 -0.5322151184082031 1 Unmodified _TKPRQQLS_ ENST00000597145.5_1_19:4683234-4684926:-|nuORF 2.059750862983233 0.8118298629782807 5 {I|L} 1 7 9.8329 0.0 0.0 1.028 0.0 0.0 825.4450813174435 0.0 825.4450813174435 0.0 9.832881222565248 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.028 + + 4 + 1 2.22 51754.2 1.0 3466 4299 7766 SUDHL4_400M_050219_1,7767 SUDHL4_400M_050219_1,7767,TKPRQQLS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7768 41.288 68.0 861760.0 25 0 58993.0 + 31169 RLPEAIEEV 9 73 528.2902764456614 1054.5659999581228 2 528.2904540896416 MULTI CID FTMS 0 0 0 7766 757737.4375 0.3969854473802848 3 -0.3460578918457031 2 Unmodified _RLPEAIEEV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 23.78978130925829 0.2284941198415988 5 A{I|L}EEV 5 4 43.954 0.0 0.0 4.1679 0.0 0.0 495.2819996564469 0.0 495.2819996564469 0.0 24.01986282587067 0.0 0.0 0 0.75 0.0 0.0 0.0 + A{I|L}EEV 4.1679 + + 91 1 2.22 53781.0 1.0 3467 4299 7766 SUDHL4_400M_050219_1,7768 SUDHL4_400M_050219_1,7768,RLPEAIEEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7769 41.289 27.0 1278100.0 25 0 211640.0 -1 ATLLNMLN 8 44 453.242279064082 904.470005194964 2 453.2422973513603 MULTI CID FTMS 0 0 0 7766 1715064.625 1.0 0 0.0 3 Oxidation (M) _ATLLNM(Oxidation (M))LN_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000548568.5_1_12:120636317-120636584:-|nuORF;nc|ENSG00000213553|Q8NHW5|RPLP0P6 4.75600775471527 0.7954636275367004 5 P 1 -1 5.4846 0.0 0.0 0.60638 0.0 0.0 522.247270675236 282.14643274478755 804.3937034200235 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.60638 - 1 + 1 2.22 33596.1 1.0 3468 4299 7766 SUDHL4_400M_050219_1,7769 SUDHL4_400M_050219_1,7769,ATLLNMLN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7770 41.292 110.0 585410.0 25 0 40076.0 + 17257 KLNPQQFEV 9 101 551.7985347290103 1101.5825165248204 2 551.7982665896416 MULTI CID FTMS 0 0 0 7766 420679.34375 1.0 0 0.0 4 Unmodified _KLNPQQFEV_ ENSG00000134910|ENST00000392708|STT3A;ENST00000525431.1_1_11:125476222-125478225:+|nuORF;ENST00000531001.1_1_11:125478078-125479612:+|nuORF;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;nc|ENSG00000134910|P46977-2|STT3A 56.17704186161178 0.0281986971544335 5 [QP]QN[K{I|L}]{M(Oxidation (M))|F}EV 9 6 + 58.923 0.0 0.0 5.349 5.349 84.618 0.0 0.0 0.0 7.078796174025896 16.478174818886373 7.078796174025896 5.496812376923046 0 0.2614393726401688 1.3979400086720375 0.0 1.1237125054200234 [QP]QN[K{I|L}]{M(Oxidation (M))|F}EV;[QP]Q{M(Oxidation (M))|F}E{I|L}{I|L}EV;[QP]Q{M(Oxidation (M))|F}[KQ]VEV;[K{I|L}]N[QP]Q{M(Oxidation (M))|F}EV;[QP][AG]N[K{I|L}]{M(Oxidation (M))|F}EV;[QP]QGG[K{I|L}]{M(Oxidation (M))|F}EV;[QP]Q{M(Oxidation (M))|F}[K{I|L}]NEV;[QP][AG]{M(Oxidation (M))|F}E{I|L}{I|L}EV;[QP][AG]{M(Oxidation (M))|F}[KQ]VEV;[K{I|L}]N[QP][AG]{M(Oxidation (M))|F}EV 5.349;4.85;4.85;4.7064;4.5131;4.5131;4.4887;4.0141;4.0141;3.8705 -;-;-;+;-;-;-;-;-;- + 575 1 2.22 54450.6 1.0 3469 4299 7766 SUDHL4_400M_050219_1,7770 SUDHL4_400M_050219_1,7770,KLNPQQFEV True True KLNPQQFEV 41.291635 551.798266589642 3202094.75 7766.0 ENST00000531001.1_1_11:125478078-125479612:+|nuORF;;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;;nc|ENSG00000134910|P46977-2|STT3A;;ENST00000525431.1_1_11:125476222-125478225:+|nuORF;;ENSG00000134910|ENST00000392708|STT3A 6.858676274617513 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7771 41.294 123.0 518720.0 25 0 90675.0 + 23551 LTLQRGSH 8 98 456.25663716561263 910.4987213980252 2 456.2567016482353 MULTI CID FTMS 0 0 0 7766 397701.46875 0.1906821265893065 8 -0.7119789123535156 5 Unmodified _LTLQRGSH_ REV__ENSG00000036257|ENST00000264414|CUL3;REV__nc|ENSG00000036257|Q13618-2|CUL3;REV__nc|ENSG00000036257|Q13618-3|CUL3 4.3292370932331545 0.7980541185046766 5 E 1 -1 4.6041 0.0 0.0 0.50567 0.0 0.0 344.2037863328573 434.2364596002563 778.4402459331136 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.50567 - 7 + 1 2.22 56594.3 1.0 3470 4299 7766 SUDHL4_400M_050219_1,7771 SUDHL4_400M_050219_1,7771,LTLQRGSH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7772 41.296 97.0 641860.0 25 0 98197.0 + 8649 EVEKRLEL 8 91 508.2930467449464 1014.5715405566928 2 508.2931396365166 MULTI CID FTMS 0 0 0 7766 367324.15625 0.531658167220682 -1 0.0864410400390625 6 Unmodified _EVEKRLEL_ REV__ENSG00000214753|ENST00000301785|HNRNPUL2 28.486842064014134 0.4448922141344407 5 {[QV]|[N{I|L}]|[RA]|[KV]}T{[QG]|[NA]}K{I|L}E{I|L} 9 -1 + 31.72 0.0 0.0 3.1265 3.1265 79.189 0.0 0.0 0.0 4.536407674536264 17.834077553067743 4.536407674536264 6.266281828186994 0 0.6069758080123702 1.5228787452803376 0.3252574989159953 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}T{[QG]|[NA]}K{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[RD]K{I|L}E{I|L};[KA]E{[QG]|[NA]}K{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[RE]|[WV]}K{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[HK][KT]{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V[WP]K{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 3.1265;2.5088;2.0625;1.5232;1.0746;0.6802 -;-;-;-;-;- 244 1 2.22 55256.5 1.0 3471 4299 7766 SUDHL4_400M_050219_1,7772 SUDHL4_400M_050219_1,7772,EVEKRLEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7773 41.299 138.0 449400.0 25 0 81714.0 + 20188 LLAETHYQL 9 85 544.2921968871437 1086.5698408410874 2 544.2930786013603 MULTI CID FTMS 0 0 0 7766 352121.25 1.0 0 0.0 7 Unmodified _LLAETHYQL_ ENSG00000132780|ENST00000350030|NASP;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;ENST00000529239.1_1_8:61850552-61850903:-|nuORF;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP;nc|ENSG00000132780|P49321-4|NASP 32.78568957990786 0.1150597335874693 5 {I|L}{I|L}AE[RH]E 7 4 67.237 0.0 0.0 6.188 0.0 0.0 0.0 235.0839785211547 235.0839785211547 30.18391413094488 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.8494850021680094 0.3252574989159953 {I|L}{I|L}AE[RH]E 6.188 - 645 + 1 2.22 53514.9 1.0 3472 4299 7766 SUDHL4_400M_050219_1,7773 SUDHL4_400M_050219_1,7773,LLAETHYQL True True LLAETHYQL 41.299058 544.29307860136 1837403.875 7766.0 nc|ENSG00000132780|P49321-2|NASP;;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;;ENSG00000132780|ENST00000350030|NASP;;nc|ENSG00000132780|P49321-4|NASP;;nc|ENSG00000132780|P49321-3|NASP;;ENST00000529239.1_1_8:61850552-61850903:-|nuORF 4.169450600941976 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7774 41.302 129.0 832430.0 25 0 47655.0 + 20469 LLLAAPAQA 9 130 434.2688834983544 866.5232140635087 2 434.2683288455009 MULTI CID FTMS 0 0 0 7766 307514.5 0.2353034573247564 -2 0.1604232788085937 8 Unmodified _LLLAAPAQA_ ENSG00000196743|ENST00000357164|GM2A 74.39630413441286 0.0193995060682538 5 {I|L}{I|L}AA{I|L}P 6 5 44.838 0.0 0.0 5.1745 0.0 0.0 0.0 285.12074361138144 285.12074361138144 32.82192023181288 0.0 0.0 0.0 0 0.6421590589602533 2.0 0.0 0.0 {I|L}{I|L}AA{I|L}P 5.1745 - 293 1 2.22 87121.4 1.0 3473 4299 7766 SUDHL4_400M_050219_1,7774 SUDHL4_400M_050219_1,7774,LLLAAPAQA True True LLLAAPAQA 41.301683 434.268328845501 7919497.5 7766.0 chr5:151253297-151266731|12|14.92|0.5|4.9|+|0|GM2A,GM2A|1;;ENSG00000196743|ENST00000357164|GM2A 4.852777004241943 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7775 41.304 99.0 352950.0 25 0 71873.0 -1 VEGVLYCR 8 63 498.2511017398145 0 498.2514831423759 PEAK CID FTMS 0 0 0 7766 238183.234375 1.0 0 0.0 9 Carbamidomethyl (C) _VEGVLYC(Carbamidomethyl (C))R_ ENST00000340800.6_1_X:108926845-108976429:-|nuORF 4.75600775471527 0.5825752635465162 5 V 1 -1 4.6041 0.0 0.0 0.46296 0.0 0.0 810.3292470813884 82.06699548892811 892.3962425703165 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.46296 + + 10 + 1 2.22 33529.6 1.0 3474 4299 7766 SUDHL4_400M_050219_1,7775 SUDHL4_400M_050219_1,7775,VEGVLYCR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7776 41.311 380.0 229040.0 25 0 10612.0 -1 0 106 902.9190966971146 1803.823640461029 2 903.4196655154228 MULTI CID FTMS 0 0 0 7766 208220.453125 0.1339787983452798 3 -0.3460578918457031 10 5 [NP]{I|L}DVH[C(Carbamidomethyl (C))R]EDARP[EP] 15 -1 + 66.683 0.0 0.0 3.6968 3.6968 78.652 0.0 0.0 0.0 18.239087409443187 7.6176083419547425 7.6176083419547425 4.125496302685576 0 0.1549471895720985 1.2218487496163564 0.4247425010840047 1.5356668758921828 [NP]{I|L}DVH[C(Carbamidomethyl (C))R]EDARP[EP];[NP]{I|L}N{I|L}A[HC]EEDARP[EP];[NP]{I|L}NM[RH]EEDARP[EP];[NP]{I|L}DVH[C(Carbamidomethyl (C))R]EN{I|L}DP[EP];[NP]{I|L}N{I|L}A[HC]EEN{I|L}DP[EP];[NP]{I|L}DVH[C(Carbamidomethyl (C))R]ENPMP[EP];[NP]{I|L}NM[RH]EE{[QV]|[N{I|L}]|[RA]|[KV]}DP[EP];[NP]{I|L}DVH[C(Carbamidomethyl (C))R]EY[Y{I|L}][EP];[NP]{I|L}N{I|L}A[HC]EE[WR]P[EP];{[QV]|[N{I|L}]|[RA]|[KV]}PDVH[C(Carbamidomethyl (C))R]EDARP[EP] 3.6968;3.468;3.4299;3.3015;3.0728;3.037;2.9416;2.7839;2.7747;2.6856 -;-;-;-;-;-;-;-;-;- 4467 1 2.22 61000.4 1.0 3475 4299 7766 SUDHL4_400M_050219_1,7776 SUDHL4_400M_050219_1,7776, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7777 41.314 159.0 309330.0 25 0 45970.0 20088 LIYEKAKH 8 81 501.2904933380042 1000.5664337428084 2 501.2912170290947 MULTI CID FTMS 0 0 0 -1 0 11 Unmodified _LIYEKAKH_ chrX:26686190-26687363|48|20.04|0.7|4.84|+|0|RPL7P58,RPL7P58|1;ENSG00000147604|ENST00000352983|RPL7;ENST00000402913.2_1_X:26704220-26705692:+|nuORF;ENST00000421245.2_1_X:72755416-72755509:+|nuORF;ENST00000461513.1_1_17:49579856-49580498:-|nuORF 5.760428011301431 0.7893668129297577 5 {I|L} 1 7 9.7539 0.0 0.0 0.97484 0.0 0.0 869.4710948529632 0.0 869.4710948529632 0.0 0.2210183124602682 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.97484 + + 9 + 1 2.22 43956.4 1.0 3476 4299 7766 SUDHL4_400M_050219_1,7777 SUDHL4_400M_050219_1,7777,LIYEKAKH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7778 41.32 336.0 328510.0 25 0 17601.0 + 31116 RLLPQVDSV 9 153 513.8014931991049 0 513.8014404177666 PEAK CID FTMS 0 0 0 7766 149088.5625 1.0 0 0.0 12 Unmodified _RLLPQVDSV_ ENSG00000141664|ENST00000269499|ZCCHC2 51.629811660486645 0.0272106947810716 5 SD 2 8 24.603 0.0 0.0 2.3989 0.0 0.0 117.0795689313492 703.4271535179972 820.5067224493464 0.0 0.0 0.0 0.0 0 1.424742501084005 0.0 0.7396518287104438 0.0 SD 2.3989 - 236 1 2.22 87172.1 1.0 3477 4299 7766 SUDHL4_400M_050219_1,7778 SUDHL4_400M_050219_1,7778,RLLPQVDSV True True RLLPQVDSV 41.319904 513.801440417767 1502839.5 7766.0 ENSG00000141664|ENST00000269499|ZCCHC2 6.005439281463623 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7779 41.33 557.0 207510.0 25 0 13913.0 18984 LDGGARIHHY 10 148 569.7909847094796 1137.5674164857592 2 569.7925292849541 MULTI CID FTMS 0 0 0 7766 133964.359375 0.9958894691400628 1 -0.1109504699707031 13 Unmodified _LDGGARIHHY_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN 14.838274106304384 0.5985701837916485 5 SENQKMQY 8 9 29.066 0.0 0.0 2.5551 0.0 0.0 111.12169002267169 0.0 111.12169002267169 0.0 14.796094286916947 0.0 0.0 0 0.3935078169319297 0.0 0.3807196863200844 0.0 SENQKMQY 2.5551 - 1715 + 1 2.22 90136.8 1.0 3478 4299 7766 SUDHL4_400M_050219_1,7779 SUDHL4_400M_050219_1,7779,LDGGARIHHY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7780 41.344 800.0 186910.0 25 0 4961.9 -1 0 150 874.9070950962428 1747.7996372592854 2 874.9117309451103 MULTI CID FTMS 0 0 0 7766 131010.9609375 0.3581516640271708 -4 0.294921875 14 5 D{I|L}DE{[YD]|[{M(Oxidation (M))|F}M]}VAN[KP]Q 12 -1 50.02 0.0 0.0 2.8619 0.0 0.0 342.1207564993229 0.0 342.1207564993229 0.0 4.2105708389002245 0.0 0.0 0 0.0 0.0 0.0 1.3979400086720375 D{I|L}DE{[YD]|[{M(Oxidation (M))|F}M]}VAN[KP]Q 2.8619 - 69880 + 1 2.22 103521.9 0.6100000143051147 3479 4299 7766 SUDHL4_400M_050219_1,7780 SUDHL4_400M_050219_1,7780, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7781 41.351 429.0 342490.0 25 0 37517.0 + 31353 RMWEDPMGA 9 146 546.7332969175678 1091.4520409019356 2 546.7325317263603 MULTI CID FTMS 0 0 0 7766 123134.1484375 0.1886033072052598 -2 0.1604232788085937 15 Unmodified _RMWEDPMGA_ ENSG00000011243|ENST00000397410|AKAP8L;ENST00000593845.5_1_19:15510111-15529746:-|nuORF;ENST00000594893.5_1_19:15511079-15529746:-|nuORF;nc|ENSG00000011243|Q9ULX6-2|AKAP8L 75.76082778847304 0.0188720312721366 5 {[WT]|[RM]}WEDPMGA 9 0 + 86.718 0.0 0.0 7.9452 7.9452 88.279 0.0 0.0 0.0 3.075857110938074 6.478174818886373 3.075857110938074 3.075857110938074 0 1.6307196863200843 0.0 0.7742275032520141 0.805462187404089 + + {[WT]|[RM]}WEDPMGA;{[TV]|[{I|L}S]}SWEDPMGA;[YN]PVEDPMGA;{NN|[MP]|[D{I|L}]|[EV]}G{[CT]|[{M(Oxidation (M))|F}G]}{I|L}DPMGA;{NN|[MP]|[D{I|L}]|[EV]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}DPMGA;[YN]PDEVPMGA;[YN]PDEVPMQ;[VS]TWEDPMGA;[YN]PD{I|L}DPMGA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KT]EDPMGA 7.9452;7.6634;7.423;7.3617;7.1964;6.8673;6.8245;6.4798;6.4302;6.3613 +;-;-;-;-;-;-;-;-;- + 1072 1 2.22 117645.1 1.0 3480 4299 7766 SUDHL4_400M_050219_1,7781 SUDHL4_400M_050219_1,7781,RMWEDPMGA True True RMWEDPMGA 41.351185 546.73253172636 11145866.0 7766.0 ENST00000594893.5_1_19:15511079-15529746:-|nuORF;;ENSG00000011243|ENST00000397410|AKAP8L;;ENST00000593845.5_1_19:15510111-15529746:-|nuORF;;nc|ENSG00000011243|Q9ULX6-2|AKAP8L 8.227469603220621 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7782 41.359 417.0 196220.0 25 0 13105.0 + 5352 DLIIGNPHEP 10 120 552.7888875028968 1103.5632220725936 2 554.2137328982353 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _DLIIGNPHEP_ REV__ENSG00000044524|ENST00000336596|EPHA3;REV__nc|ENSG00000044524|P29320-2|EPHA3 11.494710602746466 0.654671931888957 5 TEP 3 -1 17.932 0.0 0.0 1.6249 0.0 0.0 758.4008045880875 0.0 758.4008045880875 0.0 5.942124970647033 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 TEP 1.6249 - 227 1 2.22 67206.1 1.0 3481 4299 7766 SUDHL4_400M_050219_1,7782 SUDHL4_400M_050219_1,7782,DLIIGNPHEP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7783 41.363 175.0 268490.0 25 0 24325.0 + 33434 SIAHELLGP 9 90 468.76224372476304 935.509934516326 2 469.2292663455009 MULTI CID FTMS 0 0 0 7766 11335.73046875 0.0496471022260374 -2 0.1604232788085937 17 Unmodified _SIAHELLGP_ REV__ENSG00000169696|ENST00000306739|ASPSCR1;REV__ENST00000577733.5_1_17:79966858-79975195:+|nuORF;REV__ENST00000578236.5_1_17:79966858-79974746:+|nuORF;REV__ENST00000578361.5_1_17:79969964-79975195:+|nuORF;REV__ENST00000585274.1_1_17:79974599-79974746:+|nuORF;REV__nc|ENSG00000169696|Q9BZE9-2|ASPSCR1;REV__nc|ENSG00000169696|Q9BZE9-3|ASPSCR1 16.942295170755138 0.3780752226737986 5 {I|L} 1 -1 15.485 0.0 0.0 1.6552 0.0 0.0 804.4147939907386 0.0 804.4147939907386 0.0 -2.4742501084004687 -2.4742501084004687 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.6552 + + 56 + 1 2.22 39679.0 1.0 3482 4299 7766 SUDHL4_400M_050219_1,7783 SUDHL4_400M_050219_1,7783,SIAHELLGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7784 41.377 800.0 263380.0 25 0 10490.0 -1 RDRWQWWNLCV 11 168 809.8857738736754 1617.7569948141506 2 809.8860351443291 MULTI CID FTMS 0 0 0 7766 97743.8203125 0.3741639320847135 -1 0.0864410400390625 18 Carbamidomethyl (C) _RDRWQWWNLC(Carbamidomethyl (C))V_ ENSG00000185561|ENST00000330676|TLCD2 12.240655878213236 0.7805268987462184 5 MPN{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q 14 -1 + 168.97 0.0 0.0 10.445 10.445 94.342 0.0 0.0 0.0 31.89664066244956 15.287369921891669 15.287369921891669 9.050244867691418 0 4.628144697160131 1.5228787452803376 1.2249073637206092 2.7390690719683093 MPN{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q;MPGG{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}GGADQRDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NADQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NAD[AG]RDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NWQRDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NW[AG]RDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}GGWQRDG{M(Oxidation (M))|F}{I|L}Q;MPN{I|L}NWQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;MPGG{I|L}NWQRDG{M(Oxidation (M))|F}{I|L}Q 10.445;9.8854;9.8854;9.8854;9.8854;9.7701;9.2093;9.2093;9.2093;9.2093 -;-;-;-;-;-;-;-;-;- 338071 + 1 2.22 147903.2 0.4799999892711639 3483 4299 7766 SUDHL4_400M_050219_1,7784 SUDHL4_400M_050219_1,7784,RDRWQWWNLCV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7785 41.379 59.0 790440.0 25 0 73753.0 + + 37761 SQKIPGMTL 9 88 487.79051604004223 973.5664791468844 2 487.7911559939384 MULTI CID FTMS 0 0 0 7766 381767.96875 0.5006420013459653 6 -0.6374053955078125 19 Unmodified _TLRQSRTL_ nc|ENSG00000156970|O60566-3|BUB1B;ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B 9.347437153973935 0.7675937258251505 5 T{I|L} 2 -1 14.182 0.0 0.0 1.4568 0.0 0.0 741.4236396466877 0.0 741.4236396466877 0.0 4.182437647924218 0.0 0.0 0 0.0 0.0 0.25 0.0 T{I|L} 1.4568 + + 17 + 1 2.22 45053.8 1.0 3484 4299 7766 SUDHL4_400M_050219_1,7785 SUDHL4_400M_050219_1,7785,TLRQSRTL False False SQKIPGMTL 41.378797 487.791155993938 2602526.5 7766.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B;;nc|ENSG00000156970|O60566-2|BUB1B 3.0659597714742026 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7786 41.393 800.0 105590.0 25 0 8664.4 + 19565 YVIPHPVHAF 10 107 590.3384600025845 0 590.5952636599541 PEAK CID FTMS 0 0 0 -1 0 20 Unmodified _LFRVFVHVY_ nc|ENSG00000157450|Q6ZNA4-4|RNF111;ENSG00000157450|ENST00000348370|RNF111;nc|ENSG00000157450|Q6ZNA4-3|RNF111;nc|ENSG00000157450|Q6ZNA4|RNF111 8.593279151180031 0.3284076903191179 5 {I|L}Q 2 8 6.1979 0.0 0.0 0.52584 0.0 0.0 278.13955320653764 656.3523043268186 934.4918575333564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Q 0.52584 - 59 + 1 2.22 70878.1 0.6800000071525574 3485 4299 7766 SUDHL4_400M_050219_1,7786 SUDHL4_400M_050219_1,7786,LFRVFVHVY False False YVIPHPVHAF 41.392629 590.595263659954 171676.828125 7766.0 nc|ENSG00000157450|Q6ZNA4-4|RNF111;;ENSG00000157450|ENST00000348370|RNF111;;nc|ENSG00000157450|Q6ZNA4-3|RNF111;;nc|ENSG00000157450|Q6ZNA4|RNF111 3.9443357785542807 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7788 41.398 150.0 440630.0 25 0 57883.0 + 12971 HAIPPTLAM 9 106 475.7597802154014 949.5050074976028 2 475.7602416872978 MULTI CID FTMS 0 0 0 7787 318142.84375 0.2316155777447113 49 -2.488922119140625 1 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 5 [{I|L}A]HP[TP]{I|L}AM 9 2 + 26.51 0.0 0.0 2.792 2.792 76.544 0.0 0.0 0.0 1.7340256259633051 12.583455316723231 1.7340256259633051 3.767507096020996 0 0.8935078169319297 0.8538719643217619 0.9247425010840048 0.0 [{I|L}A]HP[TP]{I|L}AM;[HA]{I|L}P[TP]{I|L}AM;[YG]{I|L}[TP]P[R{M(Oxidation (M))|F}];[YG]{I|L}[TP][R{I|L}]M;{[QN]|[E{I|L}]|[KN]}S{I|L}{[ET]|[MV]}KM;[HT][RH]P[R{M(Oxidation (M))|F}];[HT][RH][R{I|L}]M;[YG]{I|L}[HA][YK]V;{[QN]|[E{I|L}]|[KN]}S[W{I|L}][R{M(Oxidation (M))|F}] 2.792;2.3952;1.9326;1.9326;1.2221;0.25952;0.25952;0.20754;0.025875 -;+;-;-;-;-;-;-;- + 214 1 2.22 59560.4 1.0 3486 4300 7787 SUDHL4_400M_050219_1,7788 SUDHL4_400M_050219_1,7788,HAIPPTLAM True True HAIPPTLAM 41.397735 475.760241687298 241448354.25 7787.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 8.990869522094727 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7789 41.401 164.0 435040.0 25 0 52560.0 + 18746 LALQRRGD 8 94 464.7702805603327 927.5260081874654 2 465.2733337283134 MULTI CID FTMS 0 0 0 7787 245316.703125 0.5788765091734132 7 -0.6010284423828125 2 Unmodified _LALQRRGD_ REV__ENSG00000204427|ENST00000395952|ABHD16A;REV__ENST00000475742.5_1_6:31654991-31656600:-|nuORF;REV__ENST00000490209.5_1_6:31655268-31655864:-|nuORF;REV__ENST00000492084.5_1_6:31654991-31670409:-|nuORF;REV__nc|ENSG00000204427|O95870-2|ABHD16A 10.183394434864962 0.7604730176254005 5 [{I|L}A]{I|L} 3 -1 23.952 0.0 0.0 2.5824 0.0 0.0 0.0 627.2971928400623 627.2971928400623 12.98332479720628 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]{I|L} 2.5824 + + 60 1 2.22 60616.1 1.0 3487 4300 7787 SUDHL4_400M_050219_1,7789 SUDHL4_400M_050219_1,7789,LALQRRGD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7790 41.402 47.0 1316800.0 25 0 224630.0 + 38544 TSSKKSGL 8 91 404.2328651563725 806.4511773795449 2 404.2328674197197 MULTI CID FTMS 0 0 0 7787 1341582.25 0.4369843091046931 -1 0.1109504699707031 3 Unmodified _TSSKKSGL_ REV__ENST00000511058.1_1_3:123385915-123401122:-|nuORF 1.844237919475145 0.8131380230371302 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 57893.8 1.0 3488 4300 7787 SUDHL4_400M_050219_1,7790 SUDHL4_400M_050219_1,7790,TSSKKSGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7791 41.404 56.0 882690.0 25 0 196630.0 + 17068 KLDENSAFL 9 63 518.7691983115371 1035.5238436898742 2 518.7693969607353 MULTI CID FTMS 0 0 0 7787 894158.75 0.6544551452569346 -1 0.1109504699707031 4 Unmodified _KLDENSAFL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 25.399314129420983 0.2080152500878129 5 A{M(Oxidation (M))|F}{I|L} 3 6 35.445 0.0 0.0 3.4229 0.0 0.0 686.3227299900609 0.0 686.3227299900609 0.0 29.960762528683706 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + A{M(Oxidation (M))|F}{I|L} 3.4229 + + 18 1 2.22 45130.8 1.0 3489 4300 7787 SUDHL4_400M_050219_1,7791 SUDHL4_400M_050219_1,7791,KLDENSAFL False True KLDENSAFL 41.403662 518.769396960735 8198092.5 7787.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 1.5551365613937378 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7792 41.406 107.0 775540.0 25 0 120660.0 + -1 LLGAPKPS 8 90 412.7460684715224 0 412.7461425662041 PEAK CID FTMS 0 0 0 7787 680054.875 0.4775697278932465 -1 0.1109504699707031 5 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LLGAPKPS_ REV__ENST00000254043.7_1_17:39675863-39676046:-|nuORF 0.7936320650641473 0.5979579398327216 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 71496.8 1.0 3490 4300 7787 SUDHL4_400M_050219_1,7792 SUDHL4_400M_050219_1,7792,LLGAPKPS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7793 41.408 97.0 351260.0 25 0 45756.0 + -1 TIMPKDIQL 9 76 537.7964870032424 1073.5784210732847 2 537.7964355349541 MULTI CID FTMS 0 0 0 7787 432560.125 1.0 0 0.0 6 Oxidation (M) _TIM(Oxidation (M))PKDIQL_ ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7;ENSG00000203852|ENST00000403683|H3C15;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197409|ENST00000356476|H3C4;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENSG00000203811|ENST00000369158|H3C14;ENSG00000275714|ENST00000613854|H3C1;ENSG00000188375|ENST00000340398|H3-5;ENSG00000277775|ENST00000618052|H3C7;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENSG00000197153|ENST00000359303|H3C12;ENSG00000132475|ENST00000254810|H3-3B;ENSG00000168148|ENST00000366696|H3-4;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;ENSG00000275379|ENST00000616365|H3C11;ENSG00000163041|ENST00000366815|H3-3A 32.78568957990786 0.1150597335874693 5 [{I|L}T]{M(Oxidation (M))|F} 3 -1 39.947 0.0 0.0 3.7209 0.0 0.0 0.0 709.3866540657253 709.3866540657253 14.47916262965279 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3252574989159953 0.0 [{I|L}T]{M(Oxidation (M))|F} 3.7209 + + 117 1 2.22 31045.0 1.0 3491 4300 7787 SUDHL4_400M_050219_1,7793 SUDHL4_400M_050219_1,7793,TIMPKDIQL False False TIMPKDIQL 41.408047 537.796435534954 2330005.75 7787.0 ENSG00000278828|ENST00000685041|H3C10;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000197409|ENST00000356476|H3C4;;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000188375|ENST00000340398|H3-5;;ENSG00000277775|ENST00000618052|H3C7;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;;ENSG00000275379|ENST00000616365|H3C11;;ENSG00000163041|ENST00000366815|H3-3A 4.159960110982259 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7794 41.411 149.0 359630.0 25 0 36680.0 + 2801 ATVHPGLEL 9 88 468.76224372476304 935.509934516326 2 468.7619811892509 MULTI CID FTMS 0 0 0 7787 263262.75 0.8858456419325389 -1 0.1109504699707031 7 Unmodified _ATVHPGLEL_ ENSG00000161542|ENST00000446526|PRPSAP1;ENST00000472686.1_1_17:74309820-74324990:-|nuORF;nc|ENSG00000161542|Q14558|PRPSAP1 46.020951573049366 0.0490941689151868 5 {[TV]|[{I|L}S]}HA[PG]{I|L}E{I|L} 9 2 + 58.553 0.0 0.0 6.259 6.259 92.723 0.0 0.0 0.0 17.727562184969372 43.86046240493748 17.727562184969372 14.730749808046326 0 1.1989700043360187 1.6989700043360187 0.3252574989159953 0.0 {[TV]|[{I|L}S]}HA[PG]{I|L}E{I|L};{[TV]|[{I|L}S]}H[QP]{I|L}E{I|L};[TA][HV][PG]{I|L}E{I|L};[HV]TA[PG]{I|L}E{I|L};[TA][PG][HV]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}[KP][HA]E{I|L};[HV]T[QP]{I|L}E{I|L};[TP]Q[HV]{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YR]{I|L}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}[TA]{I|L}E{I|L} 6.259;4.6843;4.3267;4.2546;2.9346;2.9011;2.68;2.2867;2.1831;2.1211 -;-;+;-;-;-;-;-;-;- + 263 1 2.22 46944.9 1.0 3492 4300 7787 SUDHL4_400M_050219_1,7794 SUDHL4_400M_050219_1,7794,ATVHPGLEL True True ATVHPGLEL 41.411007 468.761981189251 2072194.375 7787.0 ENSG00000161542|ENST00000446526|PRPSAP1;;ENST00000472686.1_1_17:74309820-74324990:-|nuORF;;nc|ENSG00000161542|Q14558|PRPSAP1 4.184545675913493 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7795 41.417 329.0 212660.0 25 0 17827.0 + 2235 AQDPSQLSF 9 120 496.7378928076397 991.4612326820792 2 496.7383300662041 MULTI CID FTMS 0 0 0 7787 178286.71875 1.0 0 0.0 8 Unmodified _AQDPSQLSF_ ENSG00000154016|ENST00000284154|GRAP 26.268140514670165 0.1969607489560049 5 {I|L}QAD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 6 7 37.924 0.0 0.0 3.8251 0.0 0.0 252.1092562189918 0.0 252.1092562189918 0.0 17.122213499699868 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 {I|L}QAD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3.8251 - 408 + 1 2.22 58065.6 1.0 3493 4300 7787 SUDHL4_400M_050219_1,7795 SUDHL4_400M_050219_1,7795,AQDPSQLSF False True AQDPSQLSF 41.416972 496.738330066204 985331.625 7787.0 ENSG00000154016|ENST00000284154|GRAP 3.632789055506388 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7796 41.422 265.0 253220.0 25 0 23204.0 -1 CSMADVAILA 10 117 505.2386603821933 1008.4627678311864 2 505.2393676638603 MULTI CID FTMS 0 0 0 7787 110797.71875 0.5343703550977383 -1 0.1109504699707031 9 Oxidation (M) _CSM(Oxidation (M))ADVAILA_ ENSG00000066422|ENST00000312938|ZBTB11 25.399314129420983 0.3980215340001851 5 [{I|L}A]V 3 -1 23.952 0.0 0.0 2.3751 0.0 0.0 0.0 722.2496385189396 722.2496385189396 9.259687322722812 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]V 2.3751 - 117 1 2.22 55040.2 1.0 3494 4300 7787 SUDHL4_400M_050219_1,7796 SUDHL4_400M_050219_1,7796,CSMADVAILA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7797 41.428 322.0 285160.0 25 0 32345.0 -1 SLHCHPVA 8 99 460.7250203472898 919.4354877613796 2 460.7249023318291 MULTI CID FTMS 0 0 0 7787 102169.9609375 0.7921065389322993 -1 0.1109504699707031 10 Carbamidomethyl (C) _SLHC(Carbamidomethyl (C))HPVA_ ENST00000225388.8_1_17:27590235-27590331:-|nuORF 5.760428011301431 0.7893668129297577 5 SE 2 -1 15.573 0.0 0.0 1.6938 0.0 0.0 0.0 700.3120089728648 700.3120089728648 4.6040937697618745 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SE 1.6938 - 172 + 1 2.22 80215.7 1.0 3495 4300 7787 SUDHL4_400M_050219_1,7797 SUDHL4_400M_050219_1,7797,SLHCHPVA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7798 41.442 800.0 147030.0 25 0 5573.6 -1 0 118 859.9194052703867 1717.8242576075734 2 859.9217407107353 MULTI CID FTMS 0 0 0 7787 134999.03125 1.0 0 0.0 11 5 [MN]PN{I|L}NADQRTG{M(Oxidation (M))|F}{I|L}Q 15 -1 + 102.3 0.0 0.0 5.955 5.955 84.037 0.0 0.0 0.0 22.84639579475811 12.525749891599531 12.525749891599531 3.099396087305521 0 1.6479400086720375 1.5228787452803376 0.0 1.424742501084005 [MN]PN{I|L}NADQRTG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NADQ[WK]{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NWQRTG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NEGQRTG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NADRQTG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NAD[AG]RTG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}GGADQRTG{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}NADQRTG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NADQ[VG]TG{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NWQ[WK]{M(Oxidation (M))|F}{I|L}Q 5.955;5.7746;5.5655;5.502;5.502;5.4293;5.4293;5.4293;5.4293;5.3864 -;-;-;-;-;-;-;-;-;- 3515 + 1 2.22 81804.6 0.6600000262260437 3496 4300 7787 SUDHL4_400M_050219_1,7798 SUDHL4_400M_050219_1,7798, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7799 41.45 474.0 174080.0 25 0 21905.0 -1 0 118 910.4225609480326 1818.830568962865 2 910.9185668826104 MULTI CID FTMS 0 0 0 7787 123080.2265625 0.0318003995227881 12 -0.8016738891601562 12 5 {[VA]|[{I|L}G]}GPASQV[HC]DAD{I|L}NP[EP] 18 -1 + 45.453 0.0 0.0 2.499 2.499 71.436 0.0 0.0 0.0 0.0841734941364578 6.810584150273158 0.0841734941364578 0.0841734941364578 0 0.3182503180159344 1.0969100130080565 0.0 0.4247425010840047 {[VA]|[{I|L}G]}GPASQV[HC]DAD{I|L}NP[EP];{[QV]|[N{I|L}]|[RA]|[KV]}PASQV[HC]DAD{I|L}NP[EP];{[VA]|[{I|L}G]}GPASQV[HC]WD{I|L}NP[EP];{[VA]|[{I|L}G]}GPASQV[HC]DW{I|L}NP[EP];{[QV]|[N{I|L}]|[RA]|[KV]}PASQV[HC]DW{I|L}NP[EP];{[QV]|[N{I|L}]|[RA]|[KV]}PASQV[HC]WD{I|L}NP[EP];[NP]{I|L}ASQV[HC]DAD{I|L}NP[EP];[NP]{I|L}ASQV[HC]DW{I|L}NP[EP];[NP]{I|L}ASQV[HC]WD{I|L}NP[EP];{[VA]|[{I|L}G]}GPASVQ[HC]DAD{I|L}NP[EP] 2.499;2.4944;2.4594;2.4594;2.4556;2.4556;2.4289;2.39;2.39;2.3335 -;-;-;-;-;-;-;-;-;- 6877 1 2.22 60967.2 1.0 3497 4300 7787 SUDHL4_400M_050219_1,7799 SUDHL4_400M_050219_1,7799, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7800 41.464 800.0 150000.0 25 0 11168.0 + 32088 RVLPPSALQSV 11 148 583.8479252155811 1165.681297497962 2 583.8492919802666 MULTI CID FTMS 0 0 0 7787 117695.2890625 0.2894347143896478 35 -2.1062965393066406 13 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 29.43715596616401 0.4010092210691691 5 P[PS]A{I|L}QW 7 5 35.494 0.0 0.0 3.0449 0.0 0.0 368.2542954903179 0.0 368.2542954903179 0.0 16.402902177488755 0.0 0.0 0 0.4247425010840047 0.0 0.7302046884880937 0.0 P[PS]A{I|L}QW 3.0449 - 569 1 2.22 93667.8 0.6399999856948853 3498 4300 7787 SUDHL4_400M_050219_1,7800 SUDHL4_400M_050219_1,7800,RVLPPSALQSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7801 41.478 800.0 114060.0 25 0 6126.5 + 43557 WYMMWRVYERI 11 116 816.8945371768842 1631.7745214205684 2 816.8943969607353 MULTI CID FTMS 0 0 0 7787 91209.4140625 0.5295932102793695 -2 0.1973915100097656 14 Unmodified _WYMMWRVYERI_ REV__ENSG00000168476|ENST00000306306|REEP4;REV__ENST00000519074.5_1_8:21996670-21998995:-|nuORF;REV__ENST00000519875.1_1_8:21997686-21998995:-|nuORF;REV__nc|ENSG00000168476|Q9H6H4-2|REEP4 0.0 0.8751479354844584 5 MPN{I|L}NEA[RH][Y{M(Oxidation (M))|F}]{I|L}Q 13 -1 + 115.74 0.0 0.0 7.093 7.093 96.199 0.0 0.0 0.0 79.8248744549892 10.49182108907857 10.49182108907857 33.566147098514705 0 2.5501648626366045 1.5228787452803376 0.0 1.579689690656103 MPN{I|L}NEA[RH][Y{M(Oxidation (M))|F}]{I|L}Q;MPN{I|L}NEA[RH][H{I|L}][WD];{NN|[MP]|[D{I|L}]|[EV]}N{I|L}N[RH]AE[Y{M(Oxidation (M))|F}]{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}NE{[QN]|[E{I|L}]|[KN]}{I|L}{[MG]|[TS]}M{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}N[RV]HQAE[Y{M(Oxidation (M))|F}]{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}NEHH[R{I|L}]M{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}NE{[QN]|[E{I|L}]|[KN]}{I|L}D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}N[RH][EC]{M(Oxidation (M))|F}M{I|L}Q;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}NE{[QN]|[E{I|L}]|[KN]}[WD]M{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}EG{I|L}AHQAE[Y{M(Oxidation (M))|F}]{I|L}Q 7.093;5.036;4.8898;4.7266;4.6592;4.5345;4.4933;4.4256;4.3501;4.2509 -;-;-;-;-;-;-;-;-;- 7112 + 1 2.22 67510.8 0.5699999928474426 3499 4300 7787 SUDHL4_400M_050219_1,7801 SUDHL4_400M_050219_1,7801,WYMMWRVYERI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7803 41.482 13.0 4050700.0 25 0 688870.0 + 33532 SILEHQIQV 9 77 533.7980263528578 1065.5814997725156 2 533.7984496951103 MULTI CID FTMS 0 0 0 7802 3743339.25 0.3880151047856802 1 -0.1500015258789062 1 Unmodified _SILEHQIQV_ ENSG00000104738|ENST00000649973|MCM4 65.23502041540118 0.0231836506122253 5 [HQ]E{I|L}{I|L}S{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 9 6 + 39.842 0.0 0.0 3.739 3.739 81.758 0.0 0.0 0.0 3.925449767853316 15.24781177446848 3.925449767853316 8.450980400142573 0 0.3252574989159953 0.0 0.4247425010840047 0.0 [HQ]E{I|L}{I|L}S{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[HQ]E{I|L}VT{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}[VP][WP]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[HQ][WK]Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[HQ]E{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]}[KA];[HQ]E{I|L}V{[QN]|[E{I|L}]|[KN]}[KA];[HQ][WK][AG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 3.739;2.9459;2.2618;1.138;1.1102;0.31713;0.26881 -;-;-;-;-;-;- 108 1 2.22 45964.6 1.0 3500 4301 7802 SUDHL4_400M_050219_1,7803 SUDHL4_400M_050219_1,7803,SILEHQIQV True True SILEHQIQV 41.482105 533.79844969511 50804868.0 7802.0 ENSG00000104738|ENST00000649973|MCM4 6.104451020558675 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7804 41.484 57.0 695460.0 25 0 132760.0 + 15786 ISEENFRVM 9 61 562.7739406572144 1123.5333283812288 2 562.7740356326103 MULTI CID FTMS 0 0 0 7802 674071.5 0.2321896250664482 2 -0.2334861755371093 2 Unmodified _ISEENFRVM_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 47.74868867922204 0.0453060283459952 5 {I|L}SEEN{M(Oxidation (M))|F}RVM 9 0 + 87.076 0.0 0.0 7.7502 7.7502 93.796 0.0 0.0 0.0 75.08655041508895 9.87765543582988 9.87765543582988 9.208187539523747 0 0.4247425010840047 1.6989700043360187 0.8494850021680094 0.0 + + {I|L}SEEN{M(Oxidation (M))|F}RVM;{I|L}SEEGG{M(Oxidation (M))|F}RVM 7.7502;6.9306 +;- + 102 + 1 2.22 37314.8 1.0 3501 4301 7802 SUDHL4_400M_050219_1,7804 SUDHL4_400M_050219_1,7804,ISEENFRVM True True ISEENFRVM 41.483557 562.77403563261 33269188.0 7802.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 7.231779257456462 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7805 41.485 49.0 1054400.0 25 0 165200.0 + 45636 YVNAQLPLK 9 79 523.303636221613 1044.592719510026 2 523.3040038943291 MULTI CID FTMS 0 0 0 7802 754696.625 0.7863339866175714 -1 0.0851058959960937 3 Unmodified _YVNAQLPLK_ REV__ENSG00000112893|ENST00000261483|MAN2A1 4.75600775471527 0.7486543447549536 5 [YV]D 3 -1 20.29 0.0 0.0 1.9424 0.0 0.0 0.0 664.4113284790291 664.4113284790291 7.816206019771528 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YV]D 1.9424 - 13 1 2.22 44456.4 1.0 3502 4301 7802 SUDHL4_400M_050219_1,7805 SUDHL4_400M_050219_1,7805,YVNAQLPLK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7806 41.487 121.0 246000.0 25 0 20860.0 + 18922 LAYYVIVF 8 66 494.283182503884 986.551812074568 2 494.2827636599541 MULTI CID FTMS 0 0 0 7802 371629.34375 0.1518978554296743 -3 0.2824974060058594 4 Unmodified _LAYYVIVF_ REV__ENSG00000128602|ENST00000249373|SMO 2.889219685676258 0.8067950007271085 5 {I|L} 1 -1 1.5938 0.0 0.0 0.16155 0.0 0.0 788.3782718907773 82.06703363590077 870.4453055266781 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.16155 + + 4 + 1 2.22 32510.1 1.0 3503 4301 7802 SUDHL4_400M_050219_1,7806 SUDHL4_400M_050219_1,7806,LAYYVIVF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7807 41.49 121.0 485730.0 25 0 41989.0 + 16461 KAINVFVSA 9 92 474.7789799396501 947.5434069461004 2 474.7790710330009 MULTI CID FTMS 0 0 0 7802 350720.09375 1.0 0 0.0 5 Unmodified _KAINVFVSA_ ENSG00000114209|ENST00000392750|PDCD10 25.399314129420983 0.2080152500878129 5 K{M(Oxidation (M))|F}VSA 5 4 32.817 0.0 0.0 3.4634 0.0 0.0 397.23250014472814 0.0 397.23250014472814 0.0 11.215919117981908 0.0 0.0 0 0.9929928190999392 0.0 0.0 0.3054621874040891 K{M(Oxidation (M))|F}VSA 3.4634 - 275 1 2.22 49168.5 1.0 3504 4301 7802 SUDHL4_400M_050219_1,7807 SUDHL4_400M_050219_1,7807,KAINVFVSA False True KAINVFVSA 41.489882 474.779071033001 2155458.25 7802.0 ENSG00000114209|ENST00000392750|PDCD10 2.3164071639378867 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7808 41.494 219.0 396760.0 25 0 73561.0 + 14037 IAISRTPVL 9 105 485.30834373310825 968.6021345330164 2 485.3084289431572 MULTI CID FTMS 0 0 0 7802 306858.25 0.4055589220894479 -1 0.0851058959960937 6 Unmodified _IAISRTPVL_ ENSG00000165678|ENST00000372134|GHITM 32.78568957990786 0.1150597335874693 5 {I|L}A{I|L}SV 5 4 60.433 0.0 0.0 6.2392 0.0 0.0 0.0 482.2618502252563 482.2618502252563 45.828956512079344 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {I|L}A{I|L}SV 6.2392 - 533 + 1 2.22 72171.1 1.0 3505 4301 7802 SUDHL4_400M_050219_1,7808 SUDHL4_400M_050219_1,7808,IAISRTPVL True True IAISRTPVL 41.494011 485.308428943157 4385737.0 7802.0 ENSG00000165678|ENST00000372134|GHITM 1.932845155398051 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7809 41.5 351.0 251320.0 25 0 22302.0 + 15135 INRNSINL 8 119 472.27039470913707 942.5262364850742 2 472.2702209353447 MULTI CID FTMS 0 0 0 7802 210460.046875 0.2019074492329418 9 -0.6342849731445312 7 Unmodified _INRNSINL_ REV__ENSG00000104237|ENST00000220676|RP1 26.34127834903884 0.4900704351052977 5 {I|L}{I|L}N{I|L} 4 -1 29.302 0.0 0.0 3.1089 0.0 0.0 471.2230454566647 0.0 471.2230454566647 0.0 19.21327198560853 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.805462187404089 {I|L}{I|L}N{I|L} 3.1089 - 187 + 1 2.22 71577.8 1.0 3506 4301 7802 SUDHL4_400M_050219_1,7809 SUDHL4_400M_050219_1,7809,INRNSINL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7810 41.514 800.0 132420.0 25 0 7780.9 -1 0 113 1045.0109287780692 2088.0073046229386 2 1045.512011706829 MULTI CID FTMS 0 0 0 7802 123799.609375 0.9890855330367307 1 -0.1500015258789062 8 5 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NR[HD]DAN{I|L}D{I|L}MN 15 -1 75.956 0.0 0.0 3.6377 0.0 0.0 0.0 336.1876994806136 336.1876994806136 60.38283411068228 0.0 0.0 0.0 0 0.3935078169319297 1.3979400086720375 0.3807196863200844 1.8193415193665468 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NR[HD]DAN{I|L}D{I|L}MN 3.6377 - 1469 1 2.22 73665.4 0.6499999761581421 3507 4301 7802 SUDHL4_400M_050219_1,7810 SUDHL4_400M_050219_1,7810, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7811 41.528 800.0 191700.0 25 0 19819.0 17498 KPGRQAGK 8 210 421.2554324332798 840.4963119333596 2 421.2580749392509 MULTI CID FTMS 0 0 0 7802 123602.8046875 1.0 0 0.0 9 Unmodified _KPGRQAGK_ ENSG00000130520|ENST00000593829|LSM4 4.75600775471527 0.7954636275367004 5 Y 1 8 13.099 0.0 0.0 1.5585 0.0 0.0 659.4220301724206 0.0 659.4220301724206 0.0 6.173429871607641 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.5585 - 20 + 1 2.22 117516.6 0.5299999713897705 3508 4301 7802 SUDHL4_400M_050219_1,7811 SUDHL4_400M_050219_1,7811,KPGRQAGK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7812 41.542 800.0 479010.0 25 0 70792.0 + 10508 FVDDYTVRV 9 173 557.2825444174954 1112.550535901791 2 557.2822143435478 MULTI CID FTMS 0 0 0 7802 98961.96875 0.0438948295971057 -2 0.1960563659667968 10 Unmodified _FVDDYTVRV_ ENSG00000115233|ENST00000409682|PSMD14 82.5293158979368 0.0169039238599547 5 {M(Oxidation (M))|F}VDDYTVRV 9 0 + 84.863 0.0 0.0 7.6278 7.6278 83.949 0.0 0.0 0.0 14.279981009641917 0.1336396155798098 0.1336396155798098 0.1336396155798098 0 1.1861818737241734 0.0 1.0629529932484498 0.8829131673969606 + + {M(Oxidation (M))|F}VDDYTVRV;{M(Oxidation (M))|F}VDDYTVVR;{M(Oxidation (M))|F}VDDYVTRV;{M(Oxidation (M))|F}VDDYVTVR;{M(Oxidation (M))|F}VDDVYTRV;{M(Oxidation (M))|F}VDDVYTVR;[{I|L}T]{M(Oxidation (M))|F}DYKVVE;{M(Oxidation (M))|F}VDVDYTRV;{M(Oxidation (M))|F}VDVDYTVR;{M(Oxidation (M))|F}VDDV[RV]TY 7.6278;7.6157;6.74;6.728;5.8372;5.8251;5.22;4.9649;4.9529;4.8251 +;-;-;-;-;-;-;-;-;- + 748 + 1 2.22 285485.6 0.6600000262260437 3509 4301 7802 SUDHL4_400M_050219_1,7812 SUDHL4_400M_050219_1,7812,FVDDYTVRV True True FVDDYTVRV 41.541863 557.282214343548 41294487.0 7802.0 ENSG00000115233|ENST00000409682|PSMD14 6.598413626352946 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7813 41.556 800.0 108100.0 25 0 5884.3 + -1 WEEERQPIL 9 136 600.30458649325 1797.8919300799498 3 600.3050414919853 MULTI CID FTMS 0 0 0 7802 92079.1796875 0.5730862876405093 5 -0.4781646728515625 11 ENSG00000010292|ENST00000315579|NCAPD2 5 EEE 3 -1 16.114 0.0 0.0 0.89629 0.0 0.0 785.3704790148435 622.3695162408811 1407.7399952557246 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 EEE 0.89629 - 470 + 1 2.22 67592.7 0.6499999761581421 3510 4301 7802 SUDHL4_400M_050219_1,7813 SUDHL4_400M_050219_1,7813, False False WEEERQPIL 41.555694 600.305041491985 708851.5625 7802.0 ENSG00000010292|ENST00000315579|NCAPD2 7.234930197397868 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7814 41.56 156.0 463070.0 25 0 57982.0 -1 0 102 377.2171521875482 376.2098757209482 1 377.2171203494072 MULTI CID FTMS 0 0 0 -1 0 12 5 {M(Oxidation (M))|F} 1 -1 9.9148 0.0 0.0 2.6355 0.0 0.0 211.13014657231383 0.0 211.13014657231383 0.0 1.3761136602884785 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.6355 - 10 + 1 2.22 61362.8 1.0 3511 4301 7802 SUDHL4_400M_050219_1,7814 SUDHL4_400M_050219_1,7814, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7815 41.574 800.0 190250.0 25 0 17776.0 -1 LQMKEKTMK 9 159 584.8052496984108 0 584.8054687380791 PEAK CID FTMS 0 0 0 7802 147319.90625 0.9603804903846584 -2 0.1960563659667968 13 2 Oxidation (M) _LQM(Oxidation (M))KEKTM(Oxidation (M))K_ chr4:87806184-87810606|14|10.21|0.28|5.2|+|1|IBSP,IBSP|1 24.99096001346401 0.1558265925128033 5 KTT{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L}TT 9 -1 49.619 0.0 0.0 4.2497 0.0 0.0 63.99626751508465 125.07256494693594 189.0688324620206 0.0 0.0 0.0 0.0 0 1.0 0.0 1.579689690656103 0.0 KTT{I|L}{[C(Carbamidomethyl (C))G]|[NC]}{I|L}TT 4.2497 - 1286 + 1 2.22 117539.7 0.6299999952316284 3512 4301 7802 SUDHL4_400M_050219_1,7815 SUDHL4_400M_050219_1,7815,LQMKEKTMK False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_1 7816 41.588 800.0 114440.0 25 0 6274.8 -1 0 83 880.9418412764006 3519.7382592392023 4 881.4405395388603 MULTI CID FTMS 0 0 0 7802 127847.3828125 0.820221473553872 -11 0.8176231384277344 14 5 N 1 -1 3.4949 0.0 0.0 0.099293 0.0 0.0 502.7357599053783 2899.9281273401443 3402.663887245523 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.099293 - 15 + 1 2.22 68006.8 0.5 3513 4301 7802 SUDHL4_400M_050219_1,7816 SUDHL4_400M_050219_1,7816, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7817 41.594 268.0 350190.0 25 0 79598.0 6477 EAGRIPRT 8 105 450.25637703021147 898.498201127223 2 450.2562438845634 MULTI CID FTMS 0 0 0 7802 122770.25 0.5907009417178984 4 -0.4413490295410156 15 Unmodified _EAGRIPRT_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 3.944395688203298 0.8003900995685364 5 A 1 7 9.6777 0.0 0.0 1.0771 0.0 0.0 809.4495846494871 0.0 809.4495846494871 0.0 1.89111310394419 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 1.0771 + + 36 + 1 2.22 78231.7 1.0 3514 4301 7802 SUDHL4_400M_050219_1,7817 SUDHL4_400M_050219_1,7817,EAGRIPRT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7818 41.6 314.0 213500.0 25 0 11665.0 + 23829 LVGGLAVVFF 10 125 511.3093977691236 1020.6042426050471 2 511.3083373904228 MULTI CID FTMS 0 0 0 7802 133411.171875 0.4531022989556106 -6 0.4909782409667969 16 Unmodified _LVGGLAVVFF_ REV__ENSG00000090020|ENST00000263980|SLC9A1;REV__nc|ENSG00000090020|P19634-2|SLC9A1 12.531546534597751 0.6372748319968624 5 [{I|L}V]Y 3 -1 28.072 0.0 0.0 2.7505 0.0 0.0 0.0 642.3493136041624 642.3493136041624 6.901056208558032 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]Y 2.7505 - 164 + 1 2.22 56421.7 1.0 3515 4301 7802 SUDHL4_400M_050219_1,7818 SUDHL4_400M_050219_1,7818,LVGGLAVVFF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7819 41.614 800.0 56265.0 25 0 3740.5 + -1 RKLLLLKLIKL 11 78 697.0078623765124 0 697.0078002810478 PEAK CID FTMS 0 0 0 7802 100512.9375 1.0 0 0.0 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RKLLLLKLIKL_ REV__ENST00000349215.7_1_11:18339453-18343686:-|nuORF 0.0 0.4761840153648598 5 {I|L} 1 -1 5.4846 0.0 0.0 0.394 0.0 0.0 1132.8472544387685 143.04670129947502 1275.8939557382434 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.394 + + 10 + 1 2.22 40145.7 0.5199999809265137 3516 4301 7802 SUDHL4_400M_050219_1,7819 SUDHL4_400M_050219_1,7819,RKLLLLKLIKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7820 41.627 800.0 41968.0 25 0 8808.7 -1 0 36 1199.1508120403787 3594.4306067213365 3 1199.483325183392 MULTI CID FTMS 0 0 0 7802 74784.34375 1.0 0 0.0 18 5 E 1 -1 3.0989 0.0 0.0 0.086215 0.0 0.0 2349.84150686302 1112.5265596979127 3462.3680665609327 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.086215 - 6 + 1 2.22 37812.1 0.3100000023841858 3517 4301 7802 SUDHL4_400M_050219_1,7820 SUDHL4_400M_050219_1,7820, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7822 41.633 82.0 683460.0 25 0 44299.0 + 20180 LLAALPAQA 9 102 434.2688834983544 866.5232140635087 2 434.2685424685478 MULTI CID FTMS 0 0 0 7821 276511.28125 0.2115804635795161 1 -0.0834846496582031 1 Unmodified _LLAALPAQA_ ENST00000522399.1_1_1:231090115-231114586:-|nuORF 40.44857923139169 0.0729940656229577 5 {I|L}{I|L}AA{I|L} 5 4 30.942 0.0 0.0 3.5708 0.0 0.0 0.0 382.1730303079025 382.1730303079025 19.83288122256525 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}{I|L}AA{I|L} 3.5708 + + 122 1 2.211 51234.2 1.0 3518 4302 7821 SUDHL4_400M_050219_1,7822 SUDHL4_400M_050219_1,7822,LLAALPAQA True True LLAALPAQA 41.633033 434.268542468548 7919497.5 7821.0 ENST00000522399.1_1_1:231090115-231114586:-|nuORF 3.626758416493734 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7823 41.634 46.0 950560.0 25 0 165820.0 + 42582 VTQVRQNL 8 70 479.2772729471975 956.539992961195 2 479.2771789431572 MULTI CID FTMS 0 0 0 7821 786419.875 0.4441299027367952 8 -0.484283447265625 2 Unmodified _VTQVRQNL_ REV__ENSG00000188997|ENST00000340067|KCTD21 2.889219685676258 0.8067950007271085 5 {I|L} 1 -1 11.42 0.0 0.0 1.1939 0.0 0.0 825.444943988342 0.0 825.444943988342 0.0 8.6557734385371 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1939 + + 2 + 1 2.211 40111.8 1.0 3519 4302 7821 SUDHL4_400M_050219_1,7823 SUDHL4_400M_050219_1,7823,VTQVRQNL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7824 41.635 43.0 1077600.0 25 0 211550.0 23215 LSSRGQLQL 9 71 501.2904933380042 1000.5664337428084 2 501.2907592654228 MULTI CID FTMS 0 0 0 7821 1284035.125 0.4517604145034699 -2 0.235107421875 3 Unmodified _LSSRGQLQL_ ENST00000531038.5_1_4:8472779-8495174:+|nuORF 7.910154910731844 0.6385446671287552 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.211 40534.0 1.0 3520 4302 7821 SUDHL4_400M_050219_1,7824 SUDHL4_400M_050219_1,7824,LSSRGQLQL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7825 41.637 55.0 1160300.0 25 0 196190.0 + 10418 FTDAGLKEL 9 84 497.2663397775002 992.5181266218004 2 497.2661620974541 MULTI CID FTMS 0 0 0 7821 929004.0625 0.8518162047238228 -1 0.1500015258789062 4 Unmodified _FTDAGLKEL_ ENSG00000136261|ENST00000258761|BZW2 43.77239144664712 0.0547478964384323 5 {M(Oxidation (M))|F}TDA 4 5 36.67 0.0 0.0 3.6947 0.0 0.0 0.0 555.3159449877227 555.3159449877227 14.498555472855728 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + {M(Oxidation (M))|F}TDA 3.6947 + + 280 + 1 2.211 52279.1 1.0 3521 4302 7821 SUDHL4_400M_050219_1,7825 SUDHL4_400M_050219_1,7825,FTDAGLKEL True True FTDAGLKEL 41.636877 497.266162097454 5915277.0 7821.0 ENSG00000136261|ENST00000258761|BZW2 6.256862322489421 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7826 41.638 45.0 1643200.0 25 0 172450.0 20447 LLITLWTVP 9 91 528.3266508271279 0 528.3267700076103 PEAK CID FTMS 0 0 0 7821 847344.875 1.0 0 0.0 5 Unmodified _LLITLWTVP_ ENST00000359513.8_1_11:46679078-46680967:+|nuORF 44.40701690623563 0.0469661192146891 5 {I|L}{I|L}T{[WT]|[RM]}E{I|L} 7 4 42.211 0.0 0.0 4.0024 0.0 0.0 113.08968973843692 82.06698023013905 195.15666996857595 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.3494850021680094 {I|L}{I|L}T{[WT]|[RM]}E{I|L} 4.0024 - 216 + 1 2.211 63340.2 1.0 3522 4302 7821 SUDHL4_400M_050219_1,7826 SUDHL4_400M_050219_1,7826,LLITLWTVP True False IIITPTREL 41.638139 528.32677000761 5503946.5 7821.0 ENST00000544429.5_1_12:124090532-124092210:+|nuORF;;ENST00000542286.5_1_12:124086695-124092071:+|nuORF;;ENSG00000111364|ENST00000238146|DDX55 0.5593531926472982 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7827 41.64 57.0 748260.0 25 0 96761.0 + 39287 VADNQELQL 9 81 515.26407106041 1028.5135891876198 2 515.2642700076103 MULTI CID FTMS 0 0 0 7821 579342.6875 1.0 0 0.0 6 Unmodified _VADNQELQL_ ENSG00000070366|ENST00000263073|SMG6 16.942295170755138 0.3780752226737986 5 {[VA]|[{I|L}G]}EA[VS]{I|L} 7 6 26.444 0.0 0.0 2.571 0.0 0.0 0.0 356.1216573851386 356.1216573851386 7.710259524421836 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}EA[VS]{I|L} 2.571 - 212 1 2.211 42372.6 1.0 3523 4302 7821 SUDHL4_400M_050219_1,7827 SUDHL4_400M_050219_1,7827,VADNQELQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7828 41.642 128.0 533570.0 25 0 25870.0 -1 0 74 902.9190966971146 1803.823640461029 2 902.9183837771416 MULTI CID FTMS 0 0 0 7821 540417.0 0.2988205282249753 6 -0.4305038452148437 7 5 [MN]PN{I|L}NEE[HS]AKD{I|L}S 15 -1 87.679 0.0 0.0 4.8607 0.0 0.0 0.0 121.04086481265858 121.04086481265858 59.650181445700525 0.0 0.0 0.0 0 1.274227503252014 1.3979400086720375 0.805462187404089 0.6861818737241735 [MN]PN{I|L}NEE[HS]AKD{I|L}S 4.8607 - 768 + 1 2.211 52506.0 1.0 3524 4302 7821 SUDHL4_400M_050219_1,7828 SUDHL4_400M_050219_1,7828, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7829 41.644 100.0 593730.0 25 0 62656.0 + 31354 RMWEDPMGA 9 87 546.7332969175678 1091.4520409019356 2 546.7338134646416 MULTI CID FTMS 0 0 0 7821 532807.1875 0.8160952825871771 1 -0.0834846496582031 8 Unmodified _RMWEDPMGA_ ENSG00000011243|ENST00000397410|AKAP8L;ENST00000593845.5_1_19:15510111-15529746:-|nuORF;ENST00000594893.5_1_19:15511079-15529746:-|nuORF;nc|ENSG00000011243|Q9ULX6-2|AKAP8L 34.40172386719151 0.1061884637610825 5 [YN]PDEVMPGA 10 7 + 54.32 0.0 0.0 4.9769 4.9769 77.759 0.0 0.0 0.0 1.9998689355297472 0.5115252244738144 0.5115252244738144 0.5115252244738144 0 0.75 0.0 0.4247425010840047 0.0 [YN]PDEVMPGA;[YN]PDEVMPQ;[YN]PDEVPMGA;[YN]PDEVPMQ;[YN]PVEDPMQ;{[CA]|SS}[WE]EVPMGA;{[CA]|SS}[WE]EVPMQ;[YN][HC]TVMPGA;[YN][HC]TVMPQ;{[QD]|[EN]|[WG]|[KD]|[RS]}MVT[HC]MQ 4.9769;4.93;4.8204;4.7735;4.7735;3.6295;3.5826;3.1666;3.1197;3.1197 -;-;-;-;-;-;-;-;-;- 309 + 1 2.211 53969.2 1.0 3525 4302 7821 SUDHL4_400M_050219_1,7829 SUDHL4_400M_050219_1,7829,RMWEDPMGA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7830 41.647 122.0 475860.0 25 0 79364.0 -1 AMKLINSLL 9 89 509.8038158528666 1017.5930787725332 2 509.8039123415947 MULTI CID FTMS 0 0 0 7821 422486.1875 0.4249104343122621 -5 0.5064811706542969 9 Oxidation (M) _AM(Oxidation (M))KLINSLL_ ENSG00000188738|ENST00000424728|FSIP2 4.75600775471527 0.7486543447549536 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 6 1 2.211 52114.6 1.0 3526 4302 7821 SUDHL4_400M_050219_1,7830 SUDHL4_400M_050219_1,7830,AMKLINSLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7831 41.65 138.0 412350.0 25 0 38301.0 + 17079 KLEEIIHQI 9 99 561.8301684260114 0 561.8303100466728 PEAK CID FTMS 0 0 0 7821 386748.375 1.0 0 0.0 10 Unmodified _KLEEIIHQI_ ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1 47.7319792270244 0.0378718497375857 5 EKNK{I|L}HSS 8 7 45.149 0.0 0.0 4.0253 0.0 0.0 113.08170615654588 82.06700311832265 195.1487092748685 0.0 0.0 0.0 0.0 0 2.1435078169319297 0.0 1.1989700043360187 0.8807196863200843 EKNK{I|L}HSS 4.0253 - 482 + 1 2.211 44764.6 1.0 3527 4302 7821 SUDHL4_400M_050219_1,7831 SUDHL4_400M_050219_1,7831,KLEEIIHQI True True KLEEIIHQI 41.649739 561.830310046673 2188414.25 7821.0 ENSG00000115839|ENST00000264158|RAB3GAP1;;nc|ENSG00000115839|Q15042-4|RAB3GAP1;;nc|ENSG00000115839|Q15042-3|RAB3GAP1 4.687377452850342 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7832 41.653 157.0 394920.0 25 0 57994.0 + -1 IIYDRDFSY 9 75 596.2881142269194 595.2808377603194 1 596.2878295779228 MULTI CID FTMS 0 0 0 7821 355897.78125 1.0 0 0.0 11 ENSG00000167325|ENST00000300738|RRM1 5 Y 1 -1 14.604 0.0 0.0 2.4533 0.0 0.0 414.2064034114897 0.0 414.2064034114897 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.4533 - 17 + 1 2.211 52354.1 1.0 3528 4302 7821 SUDHL4_400M_050219_1,7832 SUDHL4_400M_050219_1,7832, False False IIYDRDFSY 41.652848 596.287829577923 1818903.625 7821.0 ENSG00000167325|ENST00000300738|RRM1 6.307063738505046 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7833 41.657 226.0 320960.0 25 0 17945.0 -1 0 85 874.9070950962428 1747.7996372592854 2 874.9072143435478 MULTI CID FTMS 0 0 0 7821 285247.84375 0.7797972716799034 -1 0.1500015258789062 12 5 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NADQ{I|L}V[C(Carbamidomethyl (C))C]{I|L}Q 15 -1 + 67.925 0.0 0.0 3.8863 3.8863 81.116 0.0 0.0 0.0 6.866654986684736 6.866654986684736 6.866654986684736 6.690067809585763 0 0.8807196863200843 0.0 0.0 1.3076556684809653 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NADQ{I|L}V[C(Carbamidomethyl (C))C]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NWQ{I|L}V[C(Carbamidomethyl (C))C]{I|L}Q;[NP]{I|L}[C(Carbamidomethyl (C))H]{I|L}QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[MN][YN]V{I|L}QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[{M(Oxidation (M))|F}V][EP]{I|L}NADQ{I|L}V[C(Carbamidomethyl (C))C]{I|L}Q;[NP]{I|L}[C(Carbamidomethyl (C))H]{I|L}QWN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NADQ{I|L}V[C(Carbamidomethyl (C))C]{I|L}Q;[MN][YN]V{I|L}QWN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}[C(Carbamidomethyl (C))H]{I|L}QDAN{I|L}{[HG]|PP}PY;[MD][EP]{I|L}NWQ{I|L}V[C(Carbamidomethyl (C))C]{I|L}Q 3.8863;3.5035;3.4934;3.3474;3.2102;3.1107;3.1094;2.9646;2.8417;2.8274 -;-;-;-;-;-;-;-;-;- 1531 + 1 2.211 53831.3 1.0 3529 4302 7821 SUDHL4_400M_050219_1,7833 SUDHL4_400M_050219_1,7833, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7834 41.66 147.0 309880.0 25 0 23473.0 22984 LSGNPTISF 9 88 468.24492544406985 934.4752979549396 2 468.2454406619072 MULTI CID FTMS 0 0 0 7821 251756.03125 1.0 0 0.0 13 Unmodified _LSGNPTISF_ ENSG00000171014|ENST00000307033|OR4D5 15.847184025352805 0.4077185912009129 5 {[TV]|[{I|L}S]}AH 4 7 26.655 0.0 0.0 2.8525 0.0 0.0 0.0 523.2401044337084 523.2401044337084 5.444087325889981 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}AH 2.8525 - 125 1 2.211 40849.1 1.0 3530 4302 7821 SUDHL4_400M_050219_1,7834 SUDHL4_400M_050219_1,7834,LSGNPTISF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7835 41.664 217.0 244660.0 25 0 15494.0 + 7747 ELEKRMLEL 9 95 580.8216967175864 1159.6288405019727 2 580.8210327029228 MULTI CID FTMS 0 0 0 7821 208423.328125 1.0 0 0.0 14 Unmodified _ELEKRMLEL_ REV__ENSG00000162722|ENST00000366481|TRIM58 36.12702656103203 0.0967173616627612 5 [{I|L}T][VS]KEE{I|L}E{I|L} 10 -1 + 49.218 0.0 0.0 4.2443 4.2443 79.567 0.0 0.0 0.0 0.0561319334202892 26.85464087144375 0.0561319334202892 3.750612633917001 0 0.3054621874040891 0.0 1.6989700043360187 0.0 [{I|L}T][VS]KEE{I|L}E{I|L};[{I|L}T][VS]KE{I|L}EE{I|L};{I|L}{M(Oxidation (M))|F}{I|L}EEK[VS][VP];{I|L}{M(Oxidation (M))|F}E{I|L}EK[VS][VP];[C(Carbamidomethyl (C))K]T{I|L}EK[VS][VP] 4.2443;3.9208;3.7862;3.4627;1.3728 -;-;-;-;- 161 1 2.211 48313.7 1.0 3531 4302 7821 SUDHL4_400M_050219_1,7835 SUDHL4_400M_050219_1,7835,ELEKRMLEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7836 41.667 152.0 345550.0 25 0 42483.0 + 15324 IPLMPFPP 8 85 456.2566733366788 910.4987937401576 2 456.2566711306572 MULTI CID FTMS 0 0 0 7821 205519.265625 0.2013077194089772 -10 0.8846549987792969 15 Unmodified _IPLMPFPP_ REV__ENST00000528175.1_1_8:144803765-144804224:+|nuORF 2.889219685676258 0.8067950007271085 5 E 1 -1 6.9897 0.0 0.0 0.76768 0.0 0.0 455.2633028727733 323.17295252017817 778.4362553929515 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 E 0.76768 - 14 + 1 2.211 46856.5 1.0 3532 4302 7821 SUDHL4_400M_050219_1,7836 SUDHL4_400M_050219_1,7836,IPLMPFPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7837 41.671 197.0 345140.0 25 0 31914.0 + 18791 LAPLKFAHL 9 99 505.3115974439135 0 505.3114196658134 PEAK CID FTMS 0 0 0 7821 182980.484375 1.0 0 0.0 16 Unmodified _LAPLKFAHL_ REV__ENSG00000143669|ENST00000389793|LYST;REV__ENST00000465349.5_1_1:235954948-235996891:-|nuORF;REV__ENST00000489585.5_1_1:235926109-235996891:-|nuORF;REV__nc|ENSG00000143669|Q99698-2|LYST;REV__nc|ENSG00000143669|Q99698-3|LYST 18.13498045792455 0.2189554373504223 5 HV{I|L} 3 -1 21.682 0.0 0.0 2.1497 0.0 0.0 131.09274536682284 525.2804659479124 656.3732113147353 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 HV{I|L} 2.1497 - 36 + 1 2.211 57436.8 1.0 3533 4302 7821 SUDHL4_400M_050219_1,7837 SUDHL4_400M_050219_1,7837,LAPLKFAHL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7838 41.685 800.0 132140.0 25 0 6080.7 + 17159 KLIHPTENITF 11 132 656.8668247208253 1311.7190965084503 2 656.8666869997978 MULTI CID FTMS 0 0 0 7821 154678.25 1.0 0 0.0 17 Unmodified _KLIHPTENITF_ ENSG00000183624|ENST00000383463|HMCES 35.61225514009592 0.279986979807413 5 [EP]TN{I|L}H{I|L}K{I|L}T{M(Oxidation (M))|F} 11 8 + 61.486 0.0 0.0 4.6874 4.6874 83.105 0.0 0.0 0.0 1.6999313599165689 48.47458028708662 1.6999313599165689 6.382721639824069 0 0.9247425010840048 0.744727494896694 0.0 1.1989700043360187 [EP]TN{I|L}H{I|L}K{I|L}T{M(Oxidation (M))|F};[TP]EN{I|L}H{I|L}K{I|L}T{M(Oxidation (M))|F};[EP]TGG{I|L}H{I|L}K{I|L}T{M(Oxidation (M))|F};[{I|L}T]{I|L}[SG][W{M(Oxidation (M))|F}]K{I|L}T{M(Oxidation (M))|F};[TP]EGG{I|L}H{I|L}K{I|L}T{M(Oxidation (M))|F};{I|L}{I|L}YWTQK{I|L}T{M(Oxidation (M))|F};[{I|L}T]{M(Oxidation (M))|F}[DV]TQK{I|L}T{M(Oxidation (M))|F};{I|L}{I|L}T[SG][W{M(Oxidation (M))|F}]K{I|L}T{M(Oxidation (M))|F};{I|L}{I|L}YWT[AG]K{I|L}T{M(Oxidation (M))|F};{I|L}{I|L}Y{[DA]|[EG]}TQK{I|L}T{M(Oxidation (M))|F} 4.6874;4.2008;3.9915;3.7025;3.5049;3.3815;3.257;2.8988;2.6828;2.6828 -;-;-;-;-;-;-;-;-;- 411 1 2.211 81828.2 0.7300000190734863 3534 4302 7821 SUDHL4_400M_050219_1,7838 SUDHL4_400M_050219_1,7838,KLIHPTENITF False True KLIHPTENITF 41.684787 656.866686999798 534873.9375 7821.0 ENSG00000183624|ENST00000383463|HMCES 5.825958808263143 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7839 41.689 200.0 134600.0 25 0 10546.0 -1 RCHRRRRRCCC 11 53 578.2739669454875 1731.8000714366622 3 578.2747070193291 MULTI CID FTMS 0 0 0 7821 124952.6484375 1.0 0 0.0 18 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.8751479354844584 5 {I|L}Q 2 -1 20.573 0.0 0.0 1.188 0.0 0.0 1472.645635256778 0.0 1472.645635256778 0.0 13.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 {I|L}Q 1.188 - 19 + 1 2.211 26353.8 1.0 3535 4302 7821 SUDHL4_400M_050219_1,7839 SUDHL4_400M_050219_1,7839,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7840 41.696 414.0 239730.0 25 0 32331.0 + 14923 ILMDPSPEYA 10 130 568.2709525495397 1134.5273521658794 2 568.2697021365166 MULTI CID FTMS 0 0 0 7821 95842.234375 0.5225735493008743 -1 0.1500015258789062 19 Unmodified _ILMDPSPEYA_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 46.020951573049366 0.1035046897853725 5 [EP]SPD{I|L}M{I|L}YA 10 8 + 44.619 0.0 0.0 3.9329 3.9329 82.04 0.0 0.0 0.0 8.214562785677657 8.819459175083608 8.214562785677657 8.214562785677657 0 1.079689690656103 1.2218487496163564 0.0 0.0 [EP]SPD{I|L}M{I|L}YA;{I|L}{I|L}MD[PS][EP]YA;[PS]EPD{I|L}M{I|L}YA;[DP]TPD{I|L}M{I|L}YA;[EP]{I|L}{NN|[MP]|[D{I|L}]|[EV]}M[PS]YA;{I|L}{I|L}MD[C(Carbamidomethyl (C))H]{I|L}YA;[DP]{M(Oxidation (M))|F}{I|L}[PS][EP]YA;{I|L}{I|L}MD[PS][HD]HA;[EP]{I|L}{NN|[MP]|[D{I|L}]|[EV]}[WE]YA;[PS]DM{I|L}{I|L}[EP]YA 3.9329;3.2088;2.909;2.7393;2.6792;2.6747;2.4997;2.4089;2.3688;2.3187 -;+;-;-;-;-;-;-;-;- + 579 1 2.211 79814.6 1.0 3536 4302 7821 SUDHL4_400M_050219_1,7840 SUDHL4_400M_050219_1,7840,ILMDPSPEYA True True ILMDPSPEYA 41.696008 568.269702136517 1108818.625 7821.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 7.08138640721639 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7841 41.711 800.0 236250.0 25 0 31074.0 23680 LTSLELVRR 9 166 543.8354167111637 1085.6562804891273 2 543.8356811404228 MULTI CID FTMS 0 0 0 7821 81659.5625 0.4223749423662624 -3 0.3460578918457031 20 Unmodified _LTSLELVRR_ ENST00000456145.2_1_11:2320921-2321980:-|nuORF;ENST00000470369.1_1_11:2320857-2321980:-|nuORF 23.1484247019978 0.2366544122328345 5 [{I|L}T]{I|L}SEQS{I|L} 8 6 68.836 0.0 0.0 6.3405 0.0 0.0 0.0 211.1559016729869 211.1559016729869 53.17410004652736 0.0 0.0 0.0 0 0.0 2.0 1.5228787452803376 0.3252574989159953 [{I|L}T]{I|L}SEQS{I|L} 6.3405 - 1065 1 2.211 143323.0 0.5299999713897705 3537 4302 7821 SUDHL4_400M_050219_1,7841 SUDHL4_400M_050219_1,7841,LTSLELVRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7843 41.716 60.0 885090.0 25 0 145360.0 + 38545 TSSKKSGL 8 86 404.2328651563725 806.4511773795449 2 404.2327453494072 MULTI CID FTMS 0 0 0 7842 750913.625 0.2445899024215068 2 -0.2078628540039062 1 Unmodified _TSSKKSGL_ REV__ENST00000511058.1_1_3:123385915-123401122:-|nuORF 4.3292370932331545 0.7980541185046766 5 S 1 -1 9.464 0.0 0.0 1.1735 0.0 0.0 701.4078633310082 0.0 701.4078633310082 0.0 9.463950151760656 0.0 0.0 0 0.0 0.0 0.0 0.0 S 1.1735 + + 1 + 1 2.203 50162.0 1.0 3538 4303 7842 SUDHL4_400M_050219_1,7843 SUDHL4_400M_050219_1,7843,TSSKKSGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7844 41.718 100.0 649460.0 25 0 97488.0 17485 KPGEIAPL 8 98 412.7460684715224 0 412.7460815310478 PEAK CID FTMS 0 0 0 7842 410279.3125 0.2881193662950408 2 -0.2078628540039062 2 Unmodified _KPGEIAPL_ ENSG00000170909|ENST00000358375|OSCAR;nc|ENSG00000170909|Q8IYS5-2|OSCAR;nc|ENSG00000170909|Q8IYS5-3|OSCAR;nc|ENSG00000170909|Q8IYS5-4|OSCAR;nc|ENSG00000170909|Q8IYS5-5|OSCAR;nc|ENSG00000170909|Q8IYS5-6|OSCAR;nc|ENSG00000170909|Q8IYS5-7|OSCAR;nc|ENSG00000170909|Q8IYS5|OSCAR 2.059750862983233 0.5930426321653702 5 E 1 7 0.088644 0.0 0.0 0.010765 0.0 0.0 412.2739229764448 279.14496790103755 691.4188908774823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.010765 + + 1 + 1 2.203 54939.1 1.0 3539 4303 7842 SUDHL4_400M_050219_1,7844 SUDHL4_400M_050219_1,7844,KPGEIAPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7845 41.719 5.5 16355000.0 25 0 1188600.0 -1 RCHRRRRRCCC 11 88 866.9094369824992 0 866.9085571169853 PEAK CID FTMS 0 0 0 7842 11389988.0 1.0 0 0.0 3 4 Carbamidomethyl (C) _RC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.4761840153648598 5 PN{I|L}NADQ[QP]AN{I|L} 12 -1 67.349 0.0 0.0 3.889 0.0 0.0 245.08474124887385 208.07325159244377 453.1579928413177 0.0 0.0 0.0 0.0 0 0.5994850021680094 0.0 0.0 1.4802046884880935 PN{I|L}NADQ[QP]AN{I|L} 3.889 - 1177 + 1 2.203 66909.7 1.0 3540 4303 7842 SUDHL4_400M_050219_1,7845 SUDHL4_400M_050219_1,7845,RCHRRRRRCCC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7846 41.721 26.0 2443700.0 25 0 644480.0 + 42979 VVTPLPAA 8 62 384.2354781669175 766.4564034006349 2 384.2354003787041 MULTI CID FTMS 0 0 0 7842 2707654.0 0.2251803044846712 -1 0.0834846496582031 4 Unmodified _VVTPLPAA_ REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF 0.0 0.8243325171867699 5 {M(Oxidation (M))|F} 1 -1 10.485 0.0 0.0 1.3679 0.0 0.0 601.3747516445787 0.0 601.3747516445787 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3679 - 3 + 1 2.203 57710.8 1.0 3541 4303 7842 SUDHL4_400M_050219_1,7846 SUDHL4_400M_050219_1,7846,VVTPLPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7847 41.722 77.0 1075500.0 25 0 251990.0 + 41967 VQLLGLAA 8 94 392.7485463703336 783.4825398074671 2 392.7485839724541 MULTI CID FTMS 0 0 0 7842 1055490.5 0.2775195992586177 -1 0.0834846496582031 5 Unmodified _VQLLGLAA_ REV__ENST00000331920.10_1_9:98239847-98239973:-|nuORF 2.577480529830294 0.808687252328423 5 A 1 -1 7.4743 0.0 0.0 0.95398 0.0 0.0 321.2109161275827 388.22101770572505 709.4319338333078 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 A 0.95398 + + 7 + 1 2.203 75533.7 1.0 3542 4303 7842 SUDHL4_400M_050219_1,7847 SUDHL4_400M_050219_1,7847,VQLLGLAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7848 41.724 41.0 1754900.0 25 0 198070.0 + 1602 ALLKVNQEL 9 99 514.311074557662 1026.607596182124 2 514.3113891482353 MULTI CID FTMS 0 0 0 7842 1044681.3125 0.9136682518982164 -1 0.0834846496582031 6 Unmodified _ALLKVNQEL_ ENSG00000100347|ENST00000350028|SAMM50;ENST00000474323.5_1_22:44371844-44392260:+|nuORF 54.773552608820026 0.0299037012502309 5 [{I|L}A]{I|L}{M(Oxidation (M))|F}{I|L}KV 7 6 59.301 0.0 0.0 5.7764 0.0 0.0 0.0 239.0799349420532 239.0799349420532 36.55410404594221 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 1.075257498915995 [{I|L}A]{I|L}{M(Oxidation (M))|F}{I|L}KV 5.7764 - 467 + 1 2.203 61813.2 1.0 3543 4303 7842 SUDHL4_400M_050219_1,7848 SUDHL4_400M_050219_1,7848,ALLKVNQEL True True ALLKVNQEL 41.723616 514.311389148235 6671716.0 7842.0 ENST00000474323.5_1_22:44371844-44392260:+|nuORF;;ENSG00000100347|ENST00000350028|SAMM50 3.908594846725464 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7849 41.726 125.0 445440.0 25 0 56426.0 14554 IHLGIPISNV 10 94 531.8174287035059 1061.6203044738118 2 531.8179809451103 MULTI CID FTMS 0 0 0 7842 307869.8125 0.9405781731777566 1 -0.1026725769042968 7 Unmodified _IHLGIPISNV_ ENST00000368178.3_1_1:157738198-157738513:-|nuORF 7.289230182591677 0.6929195370588109 5 {I|L}{I|L}CV 4 7 12.907 0.0 0.0 1.2158 0.0 0.0 136.066606819318 494.2732332818969 630.3398401012149 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}CV 1.2158 - 36 + 1 2.203 46563.7 1.0 3544 4303 7842 SUDHL4_400M_050219_1,7849 SUDHL4_400M_050219_1,7849,IHLGIPISNV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7850 41.729 137.0 586690.0 25 0 55269.0 + 44208 YLGEQIQKL 9 96 546.3081759581188 1090.6017989830375 2 546.3085815310478 MULTI CID FTMS 0 0 0 7842 276666.96875 1.0 0 0.0 8 Unmodified _YLGEQIQKL_ ENSG00000135775|ENST00000366669|COG2;nc|ENSG00000135775|Q14746-2|COG2 32.30548876998284 0.1201446275138228 5 Y{I|L} 2 7 42.206 0.0 0.0 3.87 0.0 0.0 0.0 811.4316675012021 811.4316675012021 3.332275199626544 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + Y{I|L} 3.87 + + 222 + 1 2.203 69625.0 1.0 3545 4303 7842 SUDHL4_400M_050219_1,7850 SUDHL4_400M_050219_1,7850,YLGEQIQKL True True YLGEQIQKL 41.728978 546.308581531048 1603531.625 7842.0 nc|ENSG00000135775|Q14746-2|COG2;;ENSG00000135775|ENST00000366669|COG2 0.8396552403767904 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7851 41.734 252.0 266120.0 25 0 34104.0 + 12972 HAIPPTLAM 9 100 475.7597802154014 949.5050074976028 2 475.7604553103447 MULTI CID FTMS 0 0 0 7842 234032.765625 0.1703814349004259 52 -2.593242645263672 9 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 5 [{I|L}A]HP[TP]{I|L}AM 9 2 + 33.744 0.0 0.0 3.5538 3.5538 77.816 0.0 0.0 0.0 3.716110699496884 5.634513666022464 3.716110699496884 3.716110699496884 0 0.8935078169319297 0.7695510786217261 1.0 0.0 [{I|L}A]HP[TP]{I|L}AM;[HA]{I|L}P[TP]{I|L}AM;[YG]{I|L}[TP]P[R{M(Oxidation (M))|F}];[YG]{I|L}[TP][R{I|L}]M;[R{M(Oxidation (M))|F}]{[CP]|[EA]}{I|L}{I|L}AM;[{M(Oxidation (M))|F}T]{I|L}{I|L}[RV]AM;[PS][YR]{I|L}{I|L}AM;[YG]{I|L}[TP]{[WT]|[RM]}{I|L};[YG]{I|L}HA[YK]V;[HT][RH][R{I|L}]M 3.5538;3.1624;2.3828;2.3828;1.8756;1.8352;1.5573;1.0869;0.95262;0.76202 -;+;-;-;-;-;-;-;-;- + 293 1 2.203 57296.0 1.0 3546 4303 7842 SUDHL4_400M_050219_1,7851 SUDHL4_400M_050219_1,7851,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7852 41.742 465.0 223790.0 25 0 46362.0 23500 LTKAVVLA 8 126 407.77348077813775 0 407.7736389040947 PEAK CID FTMS 0 0 0 7842 182009.15625 1.0 0 0.0 10 Unmodified _LTKAVVLA_ ENSG00000158246|ENST00000289166|TENT5B 30.22481116460888 0.2280668331718824 5 T{I|L}K 3 6 18.188 0.0 0.0 2.2356 0.0 0.0 202.1313053075774 266.15232263736567 468.2836279449431 0.0 0.0 0.0 0.0 0 0.5 0.0 0.5 0.0 T{I|L}K 2.2356 - 51 + 1 2.203 84846.9 1.0 3547 4303 7842 SUDHL4_400M_050219_1,7852 SUDHL4_400M_050219_1,7852,LTKAVVLA False True KAVVLTLA 41.741895 407.773638904095 1036486.3125 7842.0 ENSG00000110244|ENST00000357780|APOA4;;P15497 0.5365990151961645 2.0 False 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7853 41.745 149.0 539160.0 25 0 107300.0 42639 VTVLKPPL 8 105 433.7878134350565 865.561073936913 2 433.7877990603447 MULTI CID FTMS 0 0 0 7842 182094.203125 0.2388930975112706 -1 0.0834846496582031 11 Unmodified _VTVLKPPL_ ENST00000334126.11_1_11:73724306-73724423:-|nuORF 5.760428011301431 0.7893668129297577 5 {[TV]|[{I|L}S]}[TA]PP 6 4 12.637 0.0 0.0 1.46 0.0 0.0 0.0 296.23005522036925 296.23005522036925 1.3777650654850166 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.7742275032520141 0.0 {[TV]|[{I|L}S]}[TA]PP 1.46 - 75 1 2.203 67404.8 1.0 3548 4303 7842 SUDHL4_400M_050219_1,7853 SUDHL4_400M_050219_1,7853,VTVLKPPL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7854 41.748 187.0 459910.0 25 0 70404.0 + 37650 TLLSLRPSEA 10 89 543.8109444906501 1085.6073360481 2 543.8119384646416 MULTI CID FTMS 0 0 0 7842 160482.03125 0.407160984472633 -1 0.0834846496582031 12 Unmodified _TLLSLRPSEA_ ENSG00000163273|ENST00000409852|NPPC 32.037481411007896 0.2488723560272515 5 [{I|L}T]{I|L}S{I|L}R 6 4 65.406 0.0 0.0 6.0248 0.0 0.0 0.0 399.1522310846313 399.1522310846313 52.55272505103306 0.0 0.0 0.0 0 1.274227503252014 2.0 0.4247425010840047 0.0 + [{I|L}T]{I|L}S{I|L}R 6.0248 + + 194 + 1 2.203 68444.2 1.0 3549 4303 7842 SUDHL4_400M_050219_1,7854 SUDHL4_400M_050219_1,7854,TLLSLRPSEA False True TLLSLRPSEA 41.748462 543.811938464642 5889917.25 7842.0 ENSG00000163273|ENST00000409852|NPPC 6.448239644368489 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7855 41.762 800.0 137320.0 25 0 24133.0 + -1 FLYTGEGDTV 10 89 1101.436209157957 3301.286798074071 3 1102.104052722454 MULTI CID FTMS 0 0 0 7842 154797.71875 0.9722490027313504 -1 0.0834846496582031 13 ENSG00000101966|ENST00000371199|XIAP 5 VPMVT{I|L} 6 -1 22.974 0.0 0.0 0.69591 0.0 0.0 2217.789435868796 440.1263521783813 2657.915788047177 0.0 0.0 0.0 0.0 0 0.0 0.0 1.642159058960253 0.0 VPMVT{I|L} 0.69591 - 502 + 1 2.203 92139.3 0.6600000262260437 3550 4303 7842 SUDHL4_400M_050219_1,7855 SUDHL4_400M_050219_1,7855, False False FLYTGEGDTV 41.762326 1101.4361 621123.9375 7842.0 ENSG00000101966|ENST00000371199|XIAP 3.3538706302642822 1.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7856 41.77 419.0 137590.0 25 0 12094.0 -1 0 97 910.4225609480326 1818.830568962865 2 910.9172851443292 MULTI CID FTMS 0 0 0 7842 152013.796875 0.0392760040228413 15 -0.6805152893066406 14 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NP]{I|L}DADQ 9 -1 28.166 0.0 0.0 1.5486 0.0 0.0 0.0 818.3760470025999 818.3760470025999 3.697336178426518 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[NP]{I|L}DADQ 1.5486 - 296 + 1 2.203 44217.2 1.0 3551 4303 7842 SUDHL4_400M_050219_1,7856 SUDHL4_400M_050219_1,7856, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7857 41.784 800.0 192260.0 25 0 21205.0 37299 TIRLSRLEL 9 165 550.843147356035 1099.67174177887 2 550.8452636599541 MULTI CID FTMS 0 0 0 7842 124390.8828125 0.7877037044952646 -1 0.0834846496582031 15 Unmodified _TIRLSRLEL_ ENSG00000110400|ENST00000264025|NECTIN1;ENST00000524510.1_1_11:119547810-119558018:-|nuORF;nc|ENSG00000110400|Q15223-2|NECTIN1;nc|ENSG00000110400|Q15223-3|NECTIN1 25.399314129420983 0.2080152500878129 5 {[QN]|[E{I|L}]|[KN]}KVEK{I|L}E{I|L} 9 5 + 71.599 0.0 0.0 6.5109 6.5109 84.345 0.0 0.0 0.0 26.69006780958575 9.828044973122246 9.828044973122246 2.199667273720223 0 0.2887254899964357 1.5228787452803376 0.8129529932484498 0.25 {[QN]|[E{I|L}]|[KN]}KVEK{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}KEKV{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}KKEV{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}KVE{I|L}KE{I|L};{[QN]|[E{I|L}]|[KN]}KEVK{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}KV{[SA]|[TG]}V{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}KEV{I|L}KE{I|L};{[QN]|[E{I|L}]|[KN]}KVE{I|L}RT{I|L};{[QN]|[E{I|L}]|[KN]}KEV{I|L}RT{I|L};{[QN]|[E{I|L}]|[KN]}VKEK{I|L}E{I|L} 6.5109;6.3109;6.2889;6.2372;6.0991;5.8854;5.8253;5.7361;5.3243;5.1093 -;-;-;-;-;-;-;-;-;- 4953 1 2.203 120789.7 0.6200000047683716 3552 4303 7842 SUDHL4_400M_050219_1,7857 SUDHL4_400M_050219_1,7857,TIRLSRLEL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7858 41.797 800.0 180080.0 25 0 14203.0 11848 GLRVPPPVA 9 152 453.2824988289448 904.5504447246896 2 453.7845641970634 MULTI CID FTMS 0 0 0 7842 89470.46875 0.2994675792564477 2 -0.2078628540039062 16 Unmodified _GLRVPPPVA_ nc|ENSG00000254402|Q50LG9|LRRC24 7.910154910731844 0.6385446671287552 5 AP 2 8 13.583 0.0 0.0 1.5017 0.0 0.0 451.2943239744928 282.14623854838305 733.4405625228758 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 AP 1.5017 - 80 + 1 2.203 116221.0 0.949999988079071 3553 4303 7842 SUDHL4_400M_050219_1,7858 SUDHL4_400M_050219_1,7858,GLRVPPPVA False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 7859 41.8 32.0 1691500.0 25 0 104590.0 + 44210 YLGNINPQM 9 93 525.2576554620232 1048.5007579908463 2 525.2582885622978 MULTI CID FTMS 0 0 0 7842 707391.3125 0.3260019157571486 -1 0.0834846496582031 17 Unmodified _YLGNINPQM_ ENSG00000163714|ENST00000473835|U2SURP;ENST00000461591.5_1_3:142720470-142741912:+|nuORF;nc|ENSG00000163714|O15042-2|U2SURP 70.71552829651908 0.0208223590022201 5 [Y{I|L}][NG]{I|L}N 6 3 42.452 0.0 0.0 4.0489 0.0 0.0 0.0 371.1379205514917 371.1379205514917 20.414478256039672 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 1.305462187404089 + [Y{I|L}][NG]{I|L}N 4.0489 + + 210 1 2.203 48279.4 1.0 3554 4303 7842 SUDHL4_400M_050219_1,7859 SUDHL4_400M_050219_1,7859,YLGNINPQM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7860 41.814 800.0 135700.0 25 0 9380.8 -1 0 97 770.0279664623645 2307.0620699872934 3 770.0296508669853 MULTI CID FTMS 0 0 0 7842 123954.7265625 1.0 0 0.0 18 5 QS{I|L} 3 -1 16.075 0.0 0.0 0.69677 0.0 0.0 1602.7300520202996 373.1370368681195 1975.867088888419 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2887254899964357 QS{I|L} 0.69677 - 371 + 1 2.203 92612.9 0.5699999928474426 3555 4303 7842 SUDHL4_400M_050219_1,7860 SUDHL4_400M_050219_1,7860, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7862 41.819 51.0 1058800.0 25 0 150470.0 + 10509 FVDDYTVRV 9 64 557.2825444174954 1112.550535901791 2 557.2828246951103 MULTI CID FTMS 0 0 0 7861 742373.0 0.3292814072324341 1 -0.1051902770996093 1 Unmodified _FVDDYTVRV_ ENSG00000115233|ENST00000409682|PSMD14 29.84058131909904 0.1515068451768857 5 YDDVE 5 6 51.013 0.0 0.0 4.5853 0.0 0.0 473.2964344709 0.0 473.2964344709 0.0 44.02372200412145 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 YDDVE 4.5853 - 32 1 2.191 47938.2 1.0 3556 4304 7861 SUDHL4_400M_050219_1,7862 SUDHL4_400M_050219_1,7862,FVDDYTVRV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7863 41.82 19.0 1514800.0 25 0 124550.0 + + 1450 AERKPSVTV 9 69 494.283182503884 986.551812074568 2 494.2820007205009 MULTI CID FTMS 0 0 0 7861 2446574.0 1.0 0 0.0 2 Unmodified _ALELWRTV_ ENST00000463668.1_1_21:37623532-37623580:+|nuORF 10.183394434864962 0.7604730176254005 5 TV 2 -1 13.175 0.0 0.0 1.3355 0.0 0.0 768.4242618810117 0.0 768.4242618810117 0.0 6.185625271001172 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 TV 1.3355 + + 26 + 1 2.191 27329.5 1.0 3557 4304 7861 SUDHL4_400M_050219_1,7863 SUDHL4_400M_050219_1,7863,ALELWRTV False False AERKPSVTV 41.819867 494.282000720501 10242911.0 7861.0 ENST00000463668.1_1_21:37623532-37623580:+|nuORF -0.0623700817426045 2.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7864 41.821 28.0 1709200.0 25 0 318420.0 + + -1 KSVDPTLAL 9 68 472.27437761770506 942.53420230221 2 472.2766296267509 MULTI CID FTMS 0 0 0 7861 2034875.75 1.0 0 0.0 3 Carbamidomethyl (C) _TLPRC(Carbamidomethyl (C))IAL_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 39.957323273325 0.2350051964751539 5 [{I|L}A]E{[SA]|[TG]}R{I|L}A{I|L} 9 -1 + 44.939 0.0 0.0 4.7679 4.7679 86.264 0.0 0.0 0.0 10.949755132308567 13.000671555173824 10.949755132308567 9.208187539523747 0 0.3807196863200844 1.3010299956639813 0.9247425010840048 0.0 [{I|L}A]E{[SA]|[TG]}R{I|L}A{I|L};[{I|L}A]E{[SA]|[TG]}[VG]{I|L}A{I|L};[{I|L}T]P[C(Carbamidomethyl (C))R]{I|L}A{I|L};[{I|L}T]{[QS]|[NT]}[TP]{I|L}A{I|L};[{I|L}T]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}[H{I|L}]{I|L} 4.7679;3.7909;3.6061;2.2195;0.68364 -;-;+;-;- + 125 1 2.191 42965.6 1.0 3558 4304 7861 SUDHL4_400M_050219_1,7864 SUDHL4_400M_050219_1,7864,TLPRCIAL False False KSVDPTLAL 41.821047 472.276629626751 9569429.0 7861.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 1.7257507642110188 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7865 41.823 67.0 1385400.0 25 0 162300.0 20697 LLRQASER 8 100 486.78367774622353 971.5528025592472 2 486.7834350466728 MULTI CID FTMS 0 0 0 7861 747459.4375 0.9743577648062756 -1 0.1026725769042968 4 Unmodified _LLRQASER_ ENSG00000099260|ENST00000263174|PALMD;nc|ENSG00000099260|Q9NP74-2|PALMD;nc|ENSG00000099260|Q9NP74-3|PALMD 5.230669730166228 0.792582437072536 5 {I|L} 1 7 10.181 0.0 0.0 1.0479 0.0 0.0 840.4577230688159 0.0 840.4577230688159 0.0 9.21196073319166 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0479 + + 18 + 1 2.191 75539.2 1.0 3559 4304 7861 SUDHL4_400M_050219_1,7865 SUDHL4_400M_050219_1,7865,LLRQASER False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7866 41.825 128.0 657990.0 25 0 66229.0 + 30381 RAMEGELGEL 10 74 552.7710973815903 1103.5276418299804 2 552.7715331912041 MULTI CID FTMS 0 0 0 7861 431293.71875 0.4398309193631358 -1 0.1026725769042968 5 Unmodified _RAMEGELGEL_ ENSG00000244045|ENST00000292114|TMEM199 57.24910588100465 0.0438022649904578 5 {[DA]|[EG]}{I|L}{[MG]|[TS]}GE{I|L}GE{I|L} 11 3 + 83.047 0.0 0.0 7.5256 7.5256 84.02 0.0 0.0 0.0 0.3425366165073313 16.575773191777927 0.3425366165073313 0.3425366165073313 0 1.1307196863200843 1.3010299956639813 0.6747425010840047 0.0 {[DA]|[EG]}{I|L}{[MG]|[TS]}GE{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}G{[MG]|[TS]}GE{I|L}GE{I|L};{[DA]|[EG]}{I|L}{[MG]|[TS]}W{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}MNGE{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}G{[MG]|[TS]}W{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}G[MN]E{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}MNW{I|L}GE{I|L};{[DA]|[EG]}{I|L}{[MG]|[TS]}GE{I|L}W{I|L};{[QN]|[E{I|L}]|[KN]}G{[MG]|[TS]}GE{I|L}W{I|L};{[DA]|[EG]}{I|L}[MN]E{I|L}W{I|L} 7.5256;7.4945;7.2025;7.187;7.1714;6.8986;6.8679;6.6349;6.6039;6.388 -;-;-;-;-;-;-;-;-;- 741 1 2.191 67881.3 1.0 3560 4304 7861 SUDHL4_400M_050219_1,7866 SUDHL4_400M_050219_1,7866,RAMEGELGEL True True RAMEGELGEL 41.825265 552.771533191204 5103702.0 7861.0 ENSG00000244045|ENST00000292114|TMEM199 3.588799873987833 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7867 41.829 205.0 231300.0 25 0 28744.0 23034 LSKPIALA 8 89 406.7643211712938 811.5140894093877 2 406.7644836306572 MULTI CID FTMS 0 0 0 7861 245054.09375 1.0 0 0.0 6 Unmodified _LSKPIALA_ ENSG00000070018|ENST00000261349|LRP6 5.760428011301431 0.7893668129297577 5 A 1 7 12.764 0.0 0.0 1.5729 0.0 0.0 722.465633148937 0.0 722.465633148937 0.0 3.3002596915282467 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 1.5729 + + 14 + 1 2.191 41649.5 1.0 3561 4304 7861 SUDHL4_400M_050219_1,7867 SUDHL4_400M_050219_1,7867,LSKPIALA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7868 41.831 90.0 750590.0 25 0 101130.0 + 23625 LTQDIFHAV 9 89 522.2789147156458 1042.5432764980917 2 522.2790405154228 MULTI CID FTMS 0 0 0 7861 242683.203125 0.3370739905700948 1 -0.1051902770996093 7 Unmodified _LTQDIFHAV_ REV__ENSG00000149131|ENST00000278407|SERPING1;REV__nc|ENSG00000149131|P05155-2|SERPING1;REV__nc|ENSG00000149131|P05155-3|SERPING1 5.230669730166228 0.7320841359114558 5 V 1 -1 11.99 0.0 0.0 1.15 0.0 0.0 925.4637991194768 0.0 925.4637991194768 0.0 6.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.15 + + 13 + 1 2.191 57858.2 1.0 3562 4304 7861 SUDHL4_400M_050219_1,7868 SUDHL4_400M_050219_1,7868,LTQDIFHAV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7869 41.836 269.0 376630.0 25 0 47962.0 33504 SIKAAIKA 8 129 401.2624236569147 800.5102943806294 2 401.2624084353447 MULTI CID FTMS 0 0 0 7861 195800.90625 0.8017958167351708 -2 0.1861572265625 8 Unmodified _SIKAAIKA_ ENSG00000086712|ENST00000380122|TXLNG;nc|ENSG00000086712|Q9NUQ3-2|TXLNG 0.6903765706972694 0.8201419426409876 5 P 1 8 7.892 0.0 0.0 0.98587 0.0 0.0 685.4461978613896 0.0 685.4461978613896 0.0 7.178642847807188 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.98587 - 7 + 1 2.191 82778.4 1.0 3563 4304 7861 SUDHL4_400M_050219_1,7869 SUDHL4_400M_050219_1,7869,SIKAAIKA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7870 41.85 800.0 153150.0 25 0 10681.0 + -1 LFYRMRCERLV 11 137 779.902467362097 1557.790381790994 2 779.9040405154228 MULTI CID FTMS 0 0 0 7861 176943.625 1.0 0 0.0 9 Carbamidomethyl (C),Oxidation (M) _LFYRM(Oxidation (M))RC(Carbamidomethyl (C))ERLV_ REV__ENSG00000221947|ENST00000408926|XKR9 5.731851221503515 0.8481046878870278 5 {[QS]|[NT]}SP[WK]PSQSTN[{I|L}V] 14 -1 + 88.973 0.0 0.0 5.7115 5.7115 81.257 0.0 0.0 0.0 8.935472873777542 51.0879252092843 8.935472873777542 1.5237220041214528 0 0.6382104921644451 0.638272163982407 2.9582593340357084 0.6694451763165201 {[QS]|[NT]}SP[WK]PSQSTN[{I|L}V];{[QS]|[NT]}PS[WK]PSQSTN[{I|L}V];{[QS]|[NT]}SP[WK]PSQSTGG[{I|L}V];{[QS]|[NT]}SP[WK]PS[AG]STN[{I|L}V];{[QS]|[NT]}PS[WK]PSQSTGG[{I|L}V];{[QS]|[NT]}PS[WK]PS[AG]STN[{I|L}V];[PS]QS[WK]PSQSTN[{I|L}V];[VG]CVVQQPSQSTN[{I|L}V];[KG][WQ]VDPSQSTN[{I|L}V];{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QQPSQSTN[{I|L}V] 5.7115;5.6137;5.1305;5.1305;5.0327;5.0327;5.0101;4.9129;4.8269;4.8171 -;-;-;-;-;-;-;-;-;- 3424 1 2.191 88852.2 0.8199999928474426 3564 4304 7861 SUDHL4_400M_050219_1,7870 SUDHL4_400M_050219_1,7870,LFYRMRCERLV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7871 41.858 442.0 251590.0 25 0 19324.0 + 239 AAVSLNKS 8 186 395.2273446538331 788.4401363744662 2 395.2273742556572 MULTI CID FTMS 0 0 0 7861 137391.5625 0.6576449336929701 -1 0.1026725769042968 10 Unmodified _AAVSLNKS_ REV__ENSG00000162434|ENST00000342505|JAK1 0.7936320650641473 0.8195151834710337 5 P 1 -1 9.3323 0.0 0.0 1.1836 0.0 0.0 673.375948302492 0.0 673.375948302492 0.0 6.400480444141692 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.1836 - 26 + 1 2.191 90299.8 1.0 3565 4304 7861 SUDHL4_400M_050219_1,7871 SUDHL4_400M_050219_1,7871,AAVSLNKS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7872 41.872 800.0 373030.0 25 0 73784.0 -1 MLGDHCSL 8 211 467.1930759763115 932.371599019423 2 467.1928588747978 MULTI CID FTMS 0 0 0 7861 127599.3828125 1.0 0 0.0 11 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))LGDHCSL_ ENSG00000182208|ENST00000329957|MOB2 5.760428011301431 0.7893668129297577 5 {I|L} 1 -1 13.495 0.0 0.0 1.4474 0.0 0.0 801.2764432350465 0.0 801.2764432350465 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4474 + + 414 + 1 2.191 224277.9 0.5600000023841858 3566 4304 7861 SUDHL4_400M_050219_1,7872 SUDHL4_400M_050219_1,7872,MLGDHCSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7873 41.882 570.0 211040.0 25 0 11970.0 -1 LLLGASWMIT 10 151 560.8069906144203 0 560.8071166872978 PEAK CID FTMS 0 0 0 7861 80941.703125 0.924474283861864 -2 0.1861572265625 12 Oxidation (M) _LLLGASWM(Oxidation (M))IT_ ENSG00000094661|ENST00000641398|OR1I1 29.081581746732265 0.2251250799338715 5 GPT[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S 8 -1 26.662 0.0 0.0 2.3814 0.0 0.0 225.11390691067805 82.06699548892811 307.18090239960617 0.0 0.0 0.0 0.0 0 1.1791746928241127 0.0 0.3494850021680094 0.5 GPT[{I|L}P]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S 2.3814 - 555 + 1 2.191 91540.7 1.0 3567 4304 7861 SUDHL4_400M_050219_1,7873 SUDHL4_400M_050219_1,7873,LLLGASWMIT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7874 41.883 70.0 1297100.0 25 0 184240.0 -1 0 103 377.2171521875482 376.2098757209482 1 377.2171508669853 MULTI CID FTMS 0 0 0 7861 688485.625 0.3557320230478862 -3 0.3361587524414062 13 5 A 1 -1 1.2591 0.0 0.0 0.33467 0.0 0.0 167.1083875391107 135.04561792545158 302.15400546456226 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.33467 - 4 + 1 2.191 76495.1 1.0 3568 4304 7861 SUDHL4_400M_050219_1,7874 SUDHL4_400M_050219_1,7874, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7875 41.888 162.0 586680.0 25 0 260840.0 -1 0 83 380.2071005811033 379.19982411450326 1 380.2066833376884 MULTI CID FTMS 0 0 0 7861 308827.375 1.0 0 0.0 14 5 P 1 -1 14.604 0.0 0.0 3.8513 0.0 0.0 264.1359183301267 0.0 264.1359183301267 0.0 14.604093769761874 0.0 0.0 0 0.0 0.0 0.0 0.0 P 3.8513 - 3 + 1 2.191 80405.8 1.0 3569 4304 7861 SUDHL4_400M_050219_1,7875 SUDHL4_400M_050219_1,7875, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7876 41.891 188.0 373880.0 25 0 34780.0 19767 LGRHYVAL 8 118 464.7701311017306 927.5257092702614 2 464.7703430056572 MULTI CID FTMS 0 0 0 7861 196967.28125 0.4876303587324394 -3 0.3361587524414062 15 Unmodified _LGRHYVAL_ ENST00000577417.5_1_17:26966838-26970337:-|nuORF 15.768221252438446 0.6779680726941459 5 {I|L} 1 7 12.474 0.0 0.0 1.3449 0.0 0.0 796.4304924507286 0.0 796.4304924507286 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3449 + + 58 + 1 2.191 61750.1 1.0 3570 4304 7861 SUDHL4_400M_050219_1,7876 SUDHL4_400M_050219_1,7876,LGRHYVAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7877 41.905 800.0 134360.0 25 0 5677.4 -1 0 113 937.4276289113084 1872.8407048894169 2 937.4313232302666 MULTI CID FTMS 0 0 0 7861 122700.3515625 1.0 0 0.0 16 5 MNPN{I|L}NEEQ[QT]{NN|[MP]|[D{I|L}]|[EV]}{I|L}SQ 16 -1 + 97.235 0.0 0.0 5.1919 5.1919 84.125 0.0 0.0 0.0 78.41026247928174 5.388506796927103 5.388506796927103 5.642714304385606 0 1.416386562212267 1.5228787452803376 1.1549471895720984 1.0189301784845295 MNPN{I|L}NEEQ[QT]{NN|[MP]|[D{I|L}]|[EV]}{I|L}SQ;MNPN{I|L}NEEEEV{NN|[MP]|[D{I|L}]|[EV]}{I|L}SQ;[NP]{I|L}NE[QT][{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}N{I|L}NPN{I|L};MNPN{I|L}NEEQ[HV]E{[TV]|[{I|L}S]}[YG];[NP]{I|L}NE[WM]{[SA]|[TG]}{M(Oxidation (M))|F}N{I|L}NPN{I|L};[NP]{I|L}NEE{[MG]|[TS]}{[SA]|[TG]}{M(Oxidation (M))|F}N{I|L}NPN{I|L};[NP]{I|L}NM[WE]{[SA]|[TG]}{M(Oxidation (M))|F}N{I|L}NPN{I|L};[NP]{I|L}NE[HV]QEEN{I|L}{[HG]|PP}M{I|L};[Q{I|L}][W{M(Oxidation (M))|F}][QT]QEEN{I|L}NPN{I|L};[NP]{I|L}NM[Y{M(Oxidation (M))|F}][Y{M(Oxidation (M))|F}]N{I|L}NPN{I|L} 5.1919;4.8906;4.025;3.9631;3.931;3.8079;3.8036;3.6952;3.4195;3.4096 -;-;-;-;-;-;-;-;-;- 1396 + 1 2.191 73064.2 0.4900000095367431 3571 4304 7861 SUDHL4_400M_050219_1,7877 SUDHL4_400M_050219_1,7877, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7878 41.919 800.0 156970.0 25 0 12367.0 19678 LGLNFLSTV 9 172 482.2784266471571 962.5423003611144 2 482.2784606814384 MULTI CID FTMS 0 0 0 7861 99981.1171875 0.923728224497958 1 -0.1051902770996093 17 Unmodified _LGLNFLSTV_ ENST00000502847.1_1_4:146018911-146019220:-|nuORF;ENST00000514704.5_1_4:146018956-146019220:-|nuORF 12.531546534597751 0.4974689918368763 5 [{I|L}A][QP][RH]E{I|L} 8 8 [{I|L}A][QP][RH]E + + 10.969 -15.062 -1.8115 1.1396 1.1396 52.578 0.0 0.0 0.0 0.0 -7.000612056866309 -7.000612056866309 0.0 0 0.0 0.0 0.0 0.0 [{I|L}A][QP][RH]E{I|L} 1.1396 - 253 + 1 2.191 97337.6 0.4699999988079071 3572 4304 7861 SUDHL4_400M_050219_1,7878 SUDHL4_400M_050219_1,7878,LGLNFLSTV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7880 41.923 22.0 2205900.0 25 0 332490.0 + 20334 LLFFICSL 8 63 478.2699254430515 954.525297952903 2 478.2705261111259 MULTI CID FTMS 0 0 0 7879 2183104.25 0.6473254437825959 1 -0.0368156433105468 1 Unmodified _LLFFICSL_ REV__ENST00000589669.1_1_19:13872231-13873207:+|nuORF 10.183394434864962 0.7604730176254005 5 {I|L} 1 -1 11.594 0.0 0.0 1.2146 0.0 0.0 823.430279497628 0.0 823.430279497628 0.0 -9.3753063169585 -9.3753063169585 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2146 + + 2 + 1 2.183 44451.0 1.0 3573 4305 7879 SUDHL4_400M_050219_1,7880 SUDHL4_400M_050219_1,7880,LLFFICSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7881 41.925 22.0 1995100.0 25 0 433020.0 + 31798 RSSLGPKEK 9 72 501.2904933380042 1000.5664337428084 2 501.2909728884697 MULTI CID FTMS 0 0 0 7879 2295700.25 0.8076932447745301 1 -0.0368156433105468 2 Unmodified _RSSLGPKEK_ REV__ENSG00000149639|ENST00000237536|SOGA1;REV__nc|ENSG00000149639|O94964-1|MTCL2;REV__nc|ENSG00000149639|O94964-3|MTCL2;REV__nc|ENSG00000149639|O94964-4|MTCL2 1.4819007175156935 0.8629517609969429 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.183 37583.6 1.0 3574 4305 7879 SUDHL4_400M_050219_1,7881 SUDHL4_400M_050219_1,7881,RSSLGPKEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7882 41.926 9.2 5529700.0 25 0 299430.0 -1 0 48 873.9156162210019 1745.8166795088036 2 873.9156371951103 MULTI CID FTMS 0 0 0 7879 5830485.5 1.0 0 0.0 3 5 [MN]PN{I|L}NEA[H{I|L}]{[CA]|SS}N{I|L} 14 -1 72.132 0.0 0.0 4.1317 0.0 0.0 0.0 208.07317529849848 208.07317529849848 49.41585725094882 0.0 0.0 0.0 0 0.7742275032520141 1.6989700043360187 0.0 0.4247425010840047 [MN]PN{I|L}NEA[H{I|L}]{[CA]|SS}N{I|L} 4.1317 - 211 + 1 2.183 40675.4 1.0 3575 4305 7879 SUDHL4_400M_050219_1,7882 SUDHL4_400M_050219_1,7882, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7883 41.927 60.0 937730.0 25 0 159850.0 + -1 SMLPTLREA 9 87 509.8038158528666 1017.5930787725332 2 509.8042175173759 MULTI CID FTMS 0 0 0 7879 883721.8125 0.8887926523292422 -2 0.2078628540039062 4 Oxidation (M) _M(Oxidation (M))ALVAGKLSL_ ENSG00000034693|ENST00000367591|PEX3 3.944395688203298 0.708391353636983 5 P 1 -1 6.9897 0.0 0.0 0.68689 0.0 0.0 332.2157031655144 585.3000582330686 917.515761398583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.68689 - 11 + 1 2.183 49364.2 1.0 3576 4305 7879 SUDHL4_400M_050219_1,7883 SUDHL4_400M_050219_1,7883,MALVAGKLSL False False SMLPTLREA 41.927308 509.804217517376 2726133.0 7879.0 ENSG00000034693|ENST00000367591|PEX3 2.343936403592428 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7884 41.929 85.0 654020.0 25 0 102610.0 + 17490 KPGKPGRDG 9 69 456.2566733366788 910.4987937401576 2 456.2566100955009 MULTI CID FTMS 0 0 0 7879 562922.1875 0.551386661614039 -7 0.723846435546875 5 Unmodified _KPGKPGRDG_ REV__ENSG00000134871|ENST00000360467|COL4A2 3.944395688203298 0.7769873103969335 5 E 1 -1 5.0886 0.0 0.0 0.55889 0.0 0.0 455.262997696992 323.17246423892817 778.4354619359202 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 E 0.55889 - 4 + 1 2.183 47581.8 1.0 3577 4305 7879 SUDHL4_400M_050219_1,7884 SUDHL4_400M_050219_1,7884,KPGKPGRDG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7885 41.933 191.0 369310.0 25 0 66978.0 + + 5245 KIYSGDLVV 9 102 497.2847287199737 992.5549045067474 2 497.2847778201103 MULTI CID FTMS 0 0 0 7879 269062.375 1.0 0 0.0 6 Unmodified _DKEYKLVV_ nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;ENSG00000155629|ENST00000339364|PIK3AP1 32.30548876998284 0.3644845974844379 5 WWYK{I|L}VV 7 -1 + 28.148 0.0 0.0 2.8359 2.8359 85.049 0.0 0.0 0.0 4.470675721695088 12.663347794023991 4.470675721695088 28.14789785906428 0 0.8182503180159344 0.0 0.0 0.0 WWYK{I|L}VV 2.8359 - 117 1 2.183 60930.5 1.0 3578 4305 7879 SUDHL4_400M_050219_1,7885 SUDHL4_400M_050219_1,7885,DKEYKLVV False False KIYSGDLVV 41.932875 497.28477782011 1616123.125 7879.0 nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;;ENSG00000155629|ENST00000339364|PIK3AP1 3.696232239405314 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7886 41.938 282.0 318530.0 25 0 34679.0 + 11722 GLIDHQTYL 9 126 530.2763364375274 1058.5381199418548 2 530.2778808474541 MULTI CID FTMS 0 0 0 7879 207459.265625 0.6611992645303413 -1 0.1051902770996093 7 Unmodified _GLIDHQTYL_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 41.8396318013385 0.0653578398400075 5 [HD]Q{I|L}TAVY{I|L} 9 6 + 70.544 0.0 0.0 6.6643 6.6643 84.235 0.0 0.0 0.0 8.750612633917001 16.478174818886373 8.750612633917001 1.7609125905568137 0 0.7742275032520141 0.7958800173440752 1.1989700043360187 0.0 [HD]Q{I|L}TAVY{I|L};[HD]Q{I|L}TG{I|L}Y{I|L};[HD]QT{I|L}AVY{I|L};[HD]{I|L}QTAVY{I|L};[HD]QT{I|L}G{I|L}Y{I|L};[HD]{I|L}QTG{I|L}Y{I|L};[HQ]D{I|L}TAVY{I|L};[HD][AG]{I|L}TAVY{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}H{I|L}TAVY{I|L};[HQ]D{I|L}TG{I|L}Y{I|L} 6.6643;6.4979;6.4547;6.3799;6.2884;6.2136;5.8376;5.7944;5.7744;5.6713 -;-;-;-;-;-;-;-;-;- 1503 1 2.183 73196.3 1.0 3579 4305 7879 SUDHL4_400M_050219_1,7886 SUDHL4_400M_050219_1,7886,GLIDHQTYL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7887 41.94 111.0 399000.0 25 0 35157.0 -1 VTLACDPHL 9 81 513.255933317193 0 513.2549926638603 PEAK CID FTMS 0 0 0 7879 195887.5625 1.0 0 0.0 8 Carbamidomethyl (C) _VTLAC(Carbamidomethyl (C))DPHL_ ENST00000499291.6_1_12:11709969-11710104:+|nuORF 7.910154910731844 0.3362437653303669 5 S 1 -1 6.9897 0.0 0.0 0.68226 0.0 0.0 852.3756686589969 82.06698785953358 934.4426565185304 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.68226 - 38 + 1 2.183 39302.8 1.0 3580 4305 7879 SUDHL4_400M_050219_1,7887 SUDHL4_400M_050219_1,7887,VTLACDPHL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7888 41.944 189.0 331200.0 25 0 27341.0 + 23196 LSSEYEQYT 9 105 560.2447111069586 1118.474869280717 2 560.2451049685478 MULTI CID FTMS 0 0 0 7879 159099.0625 1.0 0 0.0 9 Unmodified _LSSEYEQYT_ REV__ENSG00000171714|ENST00000324559|ANO5 13.90604991867851 0.4602628045680013 5 {[TV]|[{I|L}S]}{[YC]|[HE]}S[WP]TY 9 -1 + 47.782 0.0 0.0 4.2721 4.2721 87.548 0.0 0.0 0.0 11.591343277454058 2.9445396217535347 2.9445396217535347 21.25006122945957 0 0.3807196863200844 2.0 0.6861818737241735 0.0 {[TV]|[{I|L}S]}{[YC]|[HE]}S[WP]TY;{[TV]|[{I|L}S]}{[YC]|[HE]}D[R{M(Oxidation (M))|F}]C{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[HS]{[TV]|[{I|L}S]}QTY;{[{M(Oxidation (M))|F}H]|[RQ]}RR[HC]TY;{[{M(Oxidation (M))|F}H]|[RQ]}{[TV]|[{I|L}S]}[HS]QTY;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP][HS]QTY 4.2721;2.3722;0.94998;0.79736;0.79254;0.68083 -;-;-;-;-;- 330 + 1 2.183 54369.5 1.0 3581 4305 7879 SUDHL4_400M_050219_1,7888 SUDHL4_400M_050219_1,7888,LSSEYEQYT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7889 41.951 395.0 335370.0 25 0 34342.0 + 8764 AVIDVGINRV 10 130 527.8221383186362 0 527.8219482302666 PEAK CID FTMS 0 0 0 7879 120862.4296875 0.7809745771182555 -2 0.2078628540039062 10 Unmodified _EVSLVRRVP_ nc|ENSG00000065911|P13995-2|MTHFD2;ENSG00000065911|ENST00000394053|MTHFD2 12.531546534597751 0.2832320739326029 5 {I|L}DVVA 5 7 19.553 0.0 0.0 1.8557 0.0 0.0 169.11912428330385 384.2008150690063 553.3199393523101 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DVVA 1.8557 - 424 + 1 2.183 107164.1 1.0 3582 4305 7879 SUDHL4_400M_050219_1,7889 SUDHL4_400M_050219_1,7889,EVSLVRRVP False False AVIDVGINRV 41.951142 527.821948230267 3221153.5 7879.0 nc|ENSG00000065911|P13995-2|MTHFD2;;ENSG00000065911|ENST00000394053|MTHFD2 4.65853230158488 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7890 41.953 104.0 731270.0 25 0 248810.0 -1 0 73 404.20986235428063 403.20258588768064 1 404.2100707888603 MULTI CID FTMS 0 0 0 7879 387316.84375 0.9570132595116894 -1 0.1051902770996093 11 5 M 1 -1 13.979 0.0 0.0 3.4671 0.0 0.0 254.15126860428063 0.0 254.15126860428063 0.0 13.979400086720377 0.0 0.0 0 0.0 0.0 0.0 0.0 M 3.4671 - 2 + 1 2.183 65395.8 1.0 3583 4305 7879 SUDHL4_400M_050219_1,7890 SUDHL4_400M_050219_1,7890, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7891 41.956 112.0 723540.0 25 0 65035.0 + 17236 KLLPENNVL 9 103 520.3109260162486 1038.607299099297 2 520.3112060427666 MULTI CID FTMS 0 0 0 7879 355333.03125 1.0 0 0.0 12 Unmodified _KLLPENNVL_ ENSG00000141510|ENST00000269305|TP53;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53 14.838274106304384 0.4350285940865338 5 NV{I|L} 3 6 15.942 0.0 0.0 1.535 0.0 0.0 694.4029408185562 0.0 694.4029408185562 0.0 -2.562893943202626 -2.562893943202626 0.0 0 0.3182503180159344 0.0 0.0 0.3807196863200844 + NV{I|L} 1.535 + + 94 1 2.183 67127.9 1.0 3584 4305 7879 SUDHL4_400M_050219_1,7891 SUDHL4_400M_050219_1,7891,KLLPENNVL False True KLLPENNVL 41.955708 520.311206042767 1877160.75 7879.0 ENSG00000141510|ENST00000269305|TP53;;nc|ENSG00000141510|P04637-2|TP53;;nc|ENSG00000141510|P04637-3|TP53 1.2795608739058175 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7893 41.961 153.0 338610.0 25 0 27647.0 + 23635 LTQLLVRPF 9 86 543.8354167111637 1085.6562804891273 2 543.8358032107353 MULTI CID FTMS 0 0 0 7892 121970.5703125 0.6308791160388882 1 -0.0377578735351562 1 Unmodified _LTQLLVRPF_ REV__ENSG00000137491|ENST00000289575|SLCO2B1;REV__ENST00000531756.5_1_11:74862426-74914042:+|nuORF;REV__nc|ENSG00000137491|O94956-2|SLCO2B1;REV__nc|ENSG00000137491|O94956-3|SLCO2B1;REV__nc|ENSG00000137491|O94956-4|SLCO2B1 8.593279151180031 0.6146971463335029 5 {M(Oxidation (M))|F} 1 -1 12.764 0.0 0.0 1.1757 0.0 0.0 920.5767191871728 0.0 920.5767191871728 0.0 0.3000404322179761 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1757 + + 53 + 1 2.183 48831.9 1.0 3585 4306 7892 SUDHL4_400M_050219_1,7893 SUDHL4_400M_050219_1,7893,LTQLLVRPF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7894 41.969 437.0 280270.0 25 0 27054.0 + 20335 LLFFSLCI 8 70 955.5345504178156 954.5272739512154 1 955.5341674685478 MULTI CID FTMS 0 0 0 7892 174302.859375 0.5774034661652151 2 -0.1023406982421875 2 Unmodified _LLFFSLCI_ REV__ENSG00000101464|ENST00000217446|PIGU;REV__ENST00000480175.1_1_20:33167126-33176390:-|nuORF;REV__nc|ENSG00000101464|Q9H490-2|PIGU 5.230669730166228 0.792582437072536 5 E 1 -1 6.1536 0.0 0.0 0.64467 0.0 0.0 187.1851851834404 635.2697237604124 822.4549089438528 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 E 0.64467 - 58 + 1 2.183 88764.9 1.0 3586 4306 7892 SUDHL4_400M_050219_1,7894 SUDHL4_400M_050219_1,7894,LLFFSLCI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7895 41.97 55.0 1023100.0 25 0 74912.0 + 11947 GMYGKIAVM 9 104 485.2486711897582 968.4827894463164 2 485.2485839724541 MULTI CID FTMS 0 0 0 7892 663299.0625 0.9518992761992644 1 -0.0377578735351562 3 Unmodified _GMYGKIAVM_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1 28.486842064014134 0.1687311288560894 5 NY{I|L}RCVM 7 6 28.906 0.0 0.0 2.9846 0.0 0.0 71.0743885724625 0.0 71.0743885724625 0.0 13.421007229268724 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.1549471895720985 NY{I|L}RCVM 2.9846 - 372 1 2.183 49602.9 1.0 3587 4306 7892 SUDHL4_400M_050219_1,7895 SUDHL4_400M_050219_1,7895,GMYGKIAVM False True GMYGKIAVM 41.970279 485.248583972454 3456341.75 7892.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;;nc|ENSG00000167986|Q16531-2|DDB1 3.649741093317668 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7896 41.975 226.0 317120.0 25 0 62744.0 -1 0 90 451.266568471869 450.259292005269 1 451.2667114138603 MULTI CID FTMS 0 0 0 7892 195632.125 0.1761404651604598 3 -0.1493644714355468 4 5 [YR]{I|L} 3 -1 [YR] + + 11.594 1.7339 0.54327 2.5749 2.5749 53.537 0.0 0.0 0.0 0.0 -1.8740810491245004 -1.8740810491245004 0.0 0 0.0 0.0 0.0 0.0 [YR]{I|L} 2.5749 - 7 + 1 2.183 62413.5 1.0 3588 4306 7892 SUDHL4_400M_050219_1,7896 SUDHL4_400M_050219_1,7896, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7897 41.98 268.0 192720.0 25 0 12703.0 -1 LSRMIRKM 8 105 533.7973182529768 1065.5800835727534 2 533.7983886599541 MULTI CID FTMS 0 0 0 -1 0 5 2 Oxidation (M) _LSRM(Oxidation (M))IRKM(Oxidation (M))_ ENSG00000063177|ENST00000549920|RPL18;ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552851.1_1_19:49119841-49122400:-|nuORF;nc|ENSG00000063177|Q07020-2|RPL18 10.183394434864962 0.7604730176254005 5 [Y{I|L}][KC]{I|L}S{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 9 -1 + 34.103 0.0 0.0 3.2004 3.2004 85.146 0.0 0.0 0.0 14.907976472194072 16.65546248849069 14.907976472194072 21.760912590556817 0 0.0 2.0 0.0 0.0 [Y{I|L}][KC]{I|L}S{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[R{M(Oxidation (M))|F}]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}S{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 3.2004;1.1582 -;- 61 1 2.183 46534.9 1.0 3589 4306 7892 SUDHL4_400M_050219_1,7897 SUDHL4_400M_050219_1,7897,LSRMIRKM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7898 41.993 800.0 134880.0 25 0 5856.3 -1 KYYLCFYLFVL 11 130 764.8969899269358 1527.7794269206715 2 764.8964111208916 MULTI CID FTMS 0 0 0 7892 118254.09375 0.3547358645135895 -4 0.3281631469726562 6 Carbamidomethyl (C) _KYYLC(Carbamidomethyl (C))FYLFVL_ MER57F_dup142|chr6:29552528-29552933:-|5.889111264267852|0.0722232426967899|6.35|48.0|19|3|sense 9.38312468134398 0.8308777417566128 5 {[SA]|[TG]}NV{[QV]|[N{I|L}]|[RA]|[KV]}DPSQSANV{I|L} 15 -1 + 106.3 0.0 0.0 6.9576 6.9576 85.058 0.0 0.0 0.0 5.880456295278407 16.690067809585756 5.880456295278407 1.780352768237563 0 0.3494850021680094 0.6989700043360187 2.048455006504028 0.8494850021680094 {[SA]|[TG]}NV{[QV]|[N{I|L}]|[RA]|[KV]}DPSQSANV{I|L};{[SA]|[TG]}GGV{[QV]|[N{I|L}]|[RA]|[KV]}DPSQSANV{I|L};{[SA]|[TG]}NV[WR]PSQSANV{I|L};{[SA]|[TG]}GGV[WR]PSQSANV{I|L};{[QG]|[NA]}SV{[QV]|[N{I|L}]|[RA]|[KV]}DPSQSANV{I|L};{[QG]|[NA]}SV[WR]PSQSANV{I|L};{[QS]|[NT]}GV{[QV]|[N{I|L}]|[RA]|[KV]}DPSQSANV{I|L};{[SA]|[TG]}NV{[QV]|[N{I|L}]|[RA]|[KV]}DPS[AG]SANV{I|L};{[SA]|[TG]}NV{[QV]|[N{I|L}]|[RA]|[KV]}DPSQSAGGV{I|L};{[NV]|[RG]}AS{[QV]|[N{I|L}]|[RA]|[KV]}DPSQSANV{I|L} 6.9576;6.8411;6.832;6.7142;6.5727;6.4471;6.4019;6.3665;6.3665;6.3665 -;-;-;-;-;-;-;-;-;- 4547 1 2.183 76578.4 0.6499999761581421 3590 4306 7892 SUDHL4_400M_050219_1,7898 SUDHL4_400M_050219_1,7898,KYYLCFYLFVL False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 7900 41.998 13.0 3024200.0 25 0 800080.0 15417 IPPGSLAL 8 53 384.2354781669175 766.4564034006349 2 384.2354003787041 MULTI CID FTMS 0 0 0 7899 4483018.5 0.3728273519587119 3 -0.1183624267578125 1 Unmodified _IPPGSLAL_ ENST00000433867.5_3_19:47219551-47220301:-|nuORF 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.177 38705.3 1.0 3591 4307 7899 SUDHL4_400M_050219_1,7900 SUDHL4_400M_050219_1,7900,IPPGSLAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7901 41.999 32.0 1456500.0 25 0 389030.0 27494 PKGVVTAL 8 52 392.7485463703336 783.4825398074671 2 392.7485534548759 MULTI CID FTMS 0 0 0 7899 1852474.875 0.4870703099143553 3 -0.1183624267578125 2 Unmodified _PKGVVTAL_ MER52D_dup518|chr14:71230781-71232935:+|1.82709249221962|0.0272404342012767|6.07|46.0|51|1|anti-sense 0.6903765706972694 0.8201419426409876 5 P 1 7 1.5938 0.0 0.0 0.20342 0.0 0.0 585.3639312643015 98.0379885309203 683.4019197952218 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.20342 + + 3 + 1 2.177 42727.8 1.0 3592 4307 7899 SUDHL4_400M_050219_1,7901 SUDHL4_400M_050219_1,7901,PKGVVTAL False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 7902 42.0 38.0 3058600.0 25 0 237580.0 -1 0 104 867.4070624541464 1732.7995719750927 2 867.4079467654228 MULTI CID FTMS 0 0 0 7899 2307970.0 0.2104538567538329 4 -0.16021728515625 3 5 [NP]{I|L}NA[QP]QDAN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]} 16 -1 + 86.184 0.0 0.0 4.9737 4.9737 83.413 0.0 0.0 0.0 14.914638017042437 7.659167939666318 7.659167939666318 5.568109453757657 0 0.0 1.154901959985743 0.0 1.7625305739907813 [NP]{I|L}NA[QP]QDAN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NA[QP]QDAN{I|L}PN{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NM[RH]DAN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}GGA[QP]QDAN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NA[QP]QDAN{I|L}GGP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NA[QP]QDAGG{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NA[QP][AG]DAN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}N[HS]{[TV]|[{I|L}S]}DAN{I|L}NP{NN|[MP]|[D{I|L}]|[EV]};[NP]{I|L}NA[QP]QDAN{I|L}PP[MN];[NP]{I|L}NM[RH]DAN{I|L}PN{NN|[MP]|[D{I|L}]|[EV]} 4.9737;4.6524;4.4585;4.4535;4.4535;4.4535;4.4535;4.1949;4.1573;4.1371 -;-;-;-;-;-;-;-;-;- 2746 1 2.177 81160.0 1.0 3593 4307 7899 SUDHL4_400M_050219_1,7902 SUDHL4_400M_050219_1,7902, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7903 42.004 182.0 416520.0 25 0 123640.0 42640 VTVLKPPL 8 90 433.7878134350565 865.561073936913 2 433.7877685427666 MULTI CID FTMS 0 0 0 7899 379188.90625 0.4974656567940831 3 -0.1183624267578125 4 Unmodified _VTVLKPPL_ ENST00000334126.11_1_11:73724306-73724423:-|nuORF 5.760428011301431 0.7893668129297577 5 {I|L} 1 7 11.259 0.0 0.0 1.3008 0.0 0.0 734.4661012580052 0.0 734.4661012580052 0.0 2.5831489800166807 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3008 + + 27 + 1 2.177 64658.9 1.0 3594 4307 7899 SUDHL4_400M_050219_1,7903 SUDHL4_400M_050219_1,7903,VTVLKPPL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7904 42.007 148.0 736650.0 25 0 77938.0 37722 TLQHIVTLL 9 124 519.3213397346747 1036.6281265361492 2 519.3215209841728 MULTI CID FTMS 0 0 0 7899 374190.375 0.9051378385680094 -1 0.0377578735351562 5 Unmodified _TLQHIVTLL_ ENSG00000168434|ENST00000307149|COG7;ENST00000566364.1_1_16:23400243-23404677:-|nuORF 34.40172386719151 0.1061884637610825 5 VVT{I|L}{I|L} 5 5 47.039 0.0 0.0 4.5377 0.0 0.0 493.2660694806656 0.0 493.2660694806656 0.0 29.3740810491245 0.0 0.0 0 0.9247425010840048 0.0 1.0 0.0 VVT{I|L}{I|L} 4.5377 - 499 1 2.177 85489.6 1.0 3595 4307 7899 SUDHL4_400M_050219_1,7904 SUDHL4_400M_050219_1,7904,TLQHIVTLL True True KHLDVVTLL 42.006881 519.321520984173 2764610.5 7899.0 nc|ENSG00000151067|Q13936-13|CACNA1C;;nc|ENSG00000151067|Q13936-20|CACNA1C;;nc|ENSG00000151067|Q13936-32|CACNA1C;;nc|ENSG00000151067|Q13936-5|CACNA1C;;nc|ENSG00000151067|Q13936-7|CACNA1C;;nc|ENSG00000157388|Q01668-2|CACNA1D;;ENSG00000081248|ENST00000362061|CACNA1S;;nc|ENSG00000151067|Q13936-37|CACNA1C;;nc|ENSG00000151067|Q13936-29|CACNA1C;;nc|ENSG00000151067|Q13936-10|CACNA1C;;ENSG00000151067|ENST00000399655|CACNA1C;;nc|ENSG00000151067|Q13936-26|CACNA1C;;nc|ENSG00000151067|Q13936-14|CACNA1C;;nc|ENSG00000151067|Q13936-11|CACNA1C;;nc|ENSG00000151067|Q13936-4|CACNA1C;;nc|ENSG00000151067|Q13936-9|CACNA1C;;nc|ENSG00000151067|Q13936-8|CACNA1C;;nc|ENSG00000151067|Q13936-30|CACNA1C;;nc|ENSG00000151067|Q13936-36|CACNA1C;;nc|ENSG00000151067|Q13936-19|CACNA1C;;ENSG00000157388|ENST00000350061|CACNA1D;;nc|ENSG00000157388|Q01668-3|CACNA1D;;nc|ENSG00000151067|Q13936-16|CACNA1C;;nc|ENSG00000151067|Q13936-34|CACNA1C;;nc|ENSG00000151067|Q13936-3|CACNA1C;;nc|ENSG00000151067|Q13936|CACNA1C;;nc|ENSG00000151067|Q13936-35|CACNA1C;;nc|ENSG00000151067|Q13936-2|CACNA1C;;nc|ENSG00000151067|Q13936-31|CACNA1C;;nc|ENSG00000151067|Q13936-23|CACNA1C;;nc|ENSG00000151067|Q13936-17|CACNA1C;;nc|ENSG00000151067|Q13936-24|CACNA1C;;nc|ENSG00000151067|Q13936-22|CACNA1C;;nc|ENSG00000151067|Q13936-6|CACNA1C;;nc|ENSG00000151067|Q13936-28|CACNA1C;;nc|ENSG00000157388|Q01668-4|CACNA1D;;nc|ENSG00000151067|Q13936-15|CACNA1C;;nc|ENSG00000151067|Q13936-18|CACNA1C;;nc|ENSG00000151067|Q13936-33|CACNA1C;;nc|ENSG00000151067|Q13936-25|CACNA1C;;nc|ENSG00000151067|Q13936-27|CACNA1C;;nc|ENSG00000151067|Q13936-21|CACNA1C 3.760540723800659 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7905 42.01 180.0 374250.0 25 0 30983.0 + 172 AAMKALQAL 9 89 458.7682436141404 0 458.7681762576103 PEAK CID FTMS 0 0 0 7899 239398.75 0.8891103835933394 -1 0.0377578735351562 6 Unmodified _AAMKALQAL_ ENSG00000040341|ENST00000524300|STAU2;ENST00000521451.5_1_8:74528012-74659064:-|nuORF;nc|ENSG00000040341|Q9NUL3-2|STAU2;nc|ENSG00000040341|Q9NUL3-3|STAU2;nc|ENSG00000040341|Q9NUL3-7|STAU2;nc|ENSG00000040341|Q9NUL3-8|STAU2 23.1484247019978 0.1725298825155634 5 QQ 2 8 15.969 0.0 0.0 1.7443 0.0 0.0 202.13236017574337 454.2639798158037 656.3963399915472 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 QQ 1.7443 - 84 + 1 2.177 56117.2 1.0 3596 4307 7899 SUDHL4_400M_050219_1,7905 SUDHL4_400M_050219_1,7905,AAMKALQAL False True AAMKALQAL 42.010356 458.76817625761 1439739.25 7899.0 nc|ENSG00000040341|Q9NUL3-8|STAU2;;nc|ENSG00000040341|Q9NUL3-2|STAU2;;nc|ENSG00000040341|Q9NUL3-3|STAU2;;ENST00000521451.5_1_8:74528012-74659064:-|nuORF;;nc|ENSG00000040341|Q9NUL3-7|STAU2;;ENSG00000040341|ENST00000524300|STAU2 2.8800785541534424 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7906 42.014 169.0 425250.0 25 0 40611.0 + 34052 SLLDLHTKV 9 100 513.3041271801885 1024.593701427177 2 513.3046142458916 MULTI CID FTMS 0 0 0 7899 145681.546875 1.0 0 0.0 7 Unmodified _SLLDLHTKV_ ENSG00000120800|ENST00000261637|UTP20 11.494710602746466 0.5255349189887087 5 {[TV]|[{I|L}S]}{I|L}D{I|L} 5 4 41.8 0.0 0.0 4.0797 0.0 0.0 0.0 480.26044641666255 480.26044641666255 27.987912850007497 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {[TV]|[{I|L}S]}{I|L}D{I|L} 4.0797 + + 160 + 1 2.177 59785.3 1.0 3597 4307 7899 SUDHL4_400M_050219_1,7906 SUDHL4_400M_050219_1,7906,SLLDLHTKV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7907 42.021 430.0 298090.0 25 0 23535.0 + -1 IERPDLITY 9 149 560.3067635270726 559.2994870604725 1 560.3060790896416 MULTI CID FTMS 0 0 0 7899 141813.96875 1.0 0 0.0 8 nc|ENSG00000099204|O14639-5|ABLIM1;nc|ENSG00000099204|O14639-3|ABLIM1;ENSG00000099204|ENST00000533213|ABLIM1;nc|ENSG00000099204|O14639-2|ABLIM1;nc|ENSG00000099204|O14639-4|ABLIM1;nc|ENSG00000099204|O14639-6|ABLIM1 5 PTY 3 -1 23.984 0.0 0.0 4.2883 0.0 0.0 180.11892783371314 0.0 180.11892783371314 0.0 1.096981436199016 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 PTY 4.2883 - 103 + 1 2.177 101500.8 1.0 3598 4307 7899 SUDHL4_400M_050219_1,7907 SUDHL4_400M_050219_1,7907, False False IERPDLITY 42.021331 560.306079089642 1604070.625 7899.0 nc|ENSG00000099204|O14639-5|ABLIM1;;nc|ENSG00000099204|O14639-3|ABLIM1;;ENSG00000099204|ENST00000533213|ABLIM1;;nc|ENSG00000099204|O14639-2|ABLIM1;;nc|ENSG00000099204|O14639-4|ABLIM1;;nc|ENSG00000099204|O14639-6|ABLIM1 4.490992069244385 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7908 42.027 284.0 253090.0 25 0 36296.0 + 12973 HAIPPTLAM 9 101 475.7597802154014 949.5050074976028 2 475.7602722048759 MULTI CID FTMS 0 0 0 7899 143093.3125 0.1041753441801 56 -3.175941467285156 9 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 5 [{I|L}A]HP[TP]{I|L}AM 9 2 + 33.992 0.0 0.0 3.58 3.58 73.627 0.0 0.0 0.0 0.3985401406549087 0.3985401406549087 0.3985401406549087 0.3985401406549087 0 0.8182503180159344 1.0 1.0 0.0 [{I|L}A]HP[TP]{I|L}AM;[YG]{I|L}[TP]PR{M(Oxidation (M))|F};[HA]{I|L}P[TP]{I|L}AM;[YG]K[QP]VKM;[YG]{I|L}[TP][R{I|L}]M;[YG]K[QP]KVM;[HT][RH]PR{M(Oxidation (M))|F};[YG]K[NP]{I|L}KM;[{M(Oxidation (M))|F}T]K[QP]KAM;[YG]{I|L}[TP]{[WT]|[RM]}{I|L} 3.58;3.538;2.7123;2.6164;2.1973;2.0221;1.9173;1.8803;1.5432;1.3778 -;-;+;-;-;-;-;-;-;- + 257 1 2.177 60611.6 1.0 3599 4307 7899 SUDHL4_400M_050219_1,7908 SUDHL4_400M_050219_1,7908,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7909 42.035 462.0 219200.0 25 0 12190.0 + 29464 QLIDYERQL 9 126 589.3134475599027 1176.6123421866052 2 589.3146850466728 MULTI CID FTMS 0 0 0 7899 130362.7421875 0.971917459860368 1 -0.0645828247070312 10 Unmodified _QLIDYERQL_ ENSG00000276023|ENST00000617516|DUSP14 32.78568957990786 0.1150597335874693 5 [Q{I|L}]{I|L}DYE 6 3 53.971 0.0 0.0 4.587 0.0 0.0 0.0 412.2325574227004 412.2325574227004 43.37506491449234 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.3807196863200844 0.0 + [Q{I|L}]{I|L}DYE 4.587 + + 291 + 1 2.177 78788.3 1.0 3600 4307 7899 SUDHL4_400M_050219_1,7909 SUDHL4_400M_050219_1,7909,QLIDYERQL True True QLIDYERQL 42.034737 589.314685046673 699829.375 7899.0 ENSG00000276023|ENST00000617516|DUSP14 4.591817061106364 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7910 42.044 525.0 256330.0 25 0 11996.0 + + 33959 RVADFGSATF 10 155 535.7663796828626 1069.5182064325252 2 535.7671386599541 MULTI CID FTMS 0 0 0 7899 128846.03125 0.9365752391881764 -1 0.0377578735351562 11 Unmodified _SLHTHEVTF_ ENSG00000179335|ENST00000395066|CLK3;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;nc|ENSG00000179335|P49761-3|CLK3;ENST00000569406.5_1_15:74914809-74922221:+|nuORF 50.855029805455786 0.0384952370514206 5 {I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}TGSAT{M(Oxidation (M))|F} 10 -1 + 57.897 0.0 0.0 5.4134 5.4134 79.989 0.0 0.0 0.0 0.2456819149073652 40.90751964955196 0.2456819149073652 1.0914446942506828 0 0.5 1.5228787452803376 1.1505149978319906 0.0 {I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}TGSAT{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[QA]{M(Oxidation (M))|F}GSAT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{[WT]|[RM]}TGSAT{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[RD]{M(Oxidation (M))|F}GSAT{M(Oxidation (M))|F};[TA]{M(Oxidation (M))|F}[PA]TGSAT{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]K[DP]GSAT{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]A[PA]TGSAT{M(Oxidation (M))|F};[{I|L}T]{[WS]|[C(Carbamidomethyl (C)){I|L}]}TGSAT{M(Oxidation (M))|F};[VP][YQ]TGSAT{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]RRGSAT{M(Oxidation (M))|F} 5.4134;5.3113;5.28;5.2299;5.1092;4.6891;4.6784;4.6773;4.4887;4.4504 -;-;-;-;-;-;-;-;-;- 2765 1 2.177 106931.5 1.0 3601 4307 7899 SUDHL4_400M_050219_1,7910 SUDHL4_400M_050219_1,7910,SLHTHEVTF False False RVADFGSATF 42.043987 535.767138659954 1027705.4375 7899.0 ENSG00000179335|ENST00000395066|CLK3;;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;;nc|ENSG00000179335|P49761-3|CLK3;;ENST00000569406.5_1_15:74914809-74922221:+|nuORF 6.100498517354329 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7911 42.058 800.0 114370.0 25 0 6805.9 -1 0 104 614.3178970344798 613.3106205678797 1 614.3170654177666 MULTI CID FTMS 0 0 0 7899 109288.46875 0.2957762357420237 3 -0.1183624267578125 12 5 Y 1 -1 11.99 0.0 0.0 1.9549 0.0 0.0 432.2357742317453 0.0 432.2357742317453 0.0 1.808639180087965 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.9549 - 38 + 1 2.177 72328.4 0.6299999952316284 3602 4307 7899 SUDHL4_400M_050219_1,7911 SUDHL4_400M_050219_1,7911, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7913 42.064 163.0 351920.0 25 0 22048.0 + 44211 YLGNINPQM 9 102 525.2576554620232 1048.5007579908463 2 525.2582275271416 MULTI CID FTMS 0 0 0 7912 187830.015625 0.0865616298199098 4 -0.1360626220703125 1 Unmodified _YLGNINPQM_ ENSG00000163714|ENST00000473835|U2SURP;ENST00000461591.5_1_3:142720470-142741912:+|nuORF;nc|ENSG00000163714|O15042-2|U2SURP 67.34385681178166 0.0221257235307089 5 [Y{I|L}]NG{I|L}N 6 5 46.978 0.0 0.0 4.4805 0.0 0.0 0.0 371.13776620662674 371.13776620662674 29.710288461753347 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.6382104921644451 [Y{I|L}]NG{I|L}N 4.4805 - 149 1 2.177 49248.6 1.0 3603 4308 7912 SUDHL4_400M_050219_1,7913 SUDHL4_400M_050219_1,7913,YLGNINPQM True True YLGNINPQM 42.063585 525.258227527142 22555004.0 7912.0 ENSG00000163714|ENST00000473835|U2SURP;;ENST00000461591.5_1_3:142720470-142741912:+|nuORF;;nc|ENSG00000163714|O15042-2|U2SURP 6.754101117451985 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7914 42.067 170.0 352380.0 25 0 57762.0 27235 PGNYILKVSV 10 86 545.3170279349571 1088.619502936714 2 545.3186523318291 MULTI CID FTMS 0 0 0 7912 259980.171875 0.2060342091412661 -14 1.167694091796875 2 Unmodified _PGNYILKVSV_ ENSG00000113083|ENST00000231004|LOX;ENST00000513319.5_1_5:121402440-121412860:-|nuORF 2.9952420565917617 0.7127817445270067 5 {I|L} 1 9 10.089 0.0 0.0 0.92674 0.0 0.0 957.5249575039 0.0 957.5249575039 0.0 6.109243748081781 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.92674 + + 13 + 1 2.177 52628.9 1.0 3604 4308 7912 SUDHL4_400M_050219_1,7914 SUDHL4_400M_050219_1,7914,PGNYILKVSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7915 42.069 93.0 574270.0 25 0 105380.0 + 14600 IIDQHTFEV 9 87 551.2822151188585 1100.549877304517 2 551.2821533083916 MULTI CID FTMS 0 0 0 7912 508578.5625 1.0 0 0.0 3 Unmodified _IIDQHTFEV_ ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1 20.453626601364224 0.2830276176381075 5 {I|L}{I|L}[YT]ETD 7 6 52.051 0.0 0.0 4.7295 0.0 0.0 0.0 262.0947664850219 262.0947664850219 37.1872008626157 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.274227503252014 0.0 {I|L}{I|L}[YT]ETD 4.7295 - 250 + 1 2.177 48815.1 1.0 3605 4308 7912 SUDHL4_400M_050219_1,7915 SUDHL4_400M_050219_1,7915,IIDQHTFEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7916 42.071 90.0 478460.0 25 0 35881.0 + 18607 LAEKSEFSV 9 86 505.2633635417657 1008.5121741503316 2 505.2627746462822 MULTI CID FTMS 0 0 0 7912 321257.96875 0.3980920787372523 -4 0.2443466186523437 4 Unmodified _LAEKSEFSV_ REV__ENSG00000174197|ENST00000703841|MGA;REV__nc|ENSG00000174197|Q8IWI9-3|MGA;REV__nc|ENSG00000174197|Q8IWI9|MGA 27.628801355627647 0.1796483985696185 5 [{I|L}V][C(Carbamidomethyl (C))R]E{M(Oxidation (M))|F}SV 8 -1 + 50.45 0.0 0.0 5.0024 5.0024 85.612 0.0 0.0 0.0 8.511744483784085 31.777807052660805 8.511744483784085 8.940291024676803 0 0.5 1.6989700043360187 0.8494850021680094 0.0 [{I|L}V][C(Carbamidomethyl (C))R]E{M(Oxidation (M))|F}SV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[HG]|PP}[KT]{M(Oxidation (M))|F}SV;[KP][R{M(Oxidation (M))|F}]E{M(Oxidation (M))|F}SV;{[DA]|[EG]}{[QN]|[E{I|L}]|[KN]}[KT]{M(Oxidation (M))|F}SV 5.0024;4.1159;3.7617;2.8259 -;-;-;- 135 1 2.177 39090.0 1.0 3606 4308 7912 SUDHL4_400M_050219_1,7916 SUDHL4_400M_050219_1,7916,LAEKSEFSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7917 42.074 133.0 604770.0 25 0 96033.0 29327 QIMAKRIW 8 96 523.303636221613 1044.592719510026 2 523.3037597537041 MULTI CID FTMS 0 0 0 7912 288014.59375 0.3000883483578289 6 -0.2005424499511718 5 Unmodified _QIMAKRIW_ ENST00000400566.5_1_21:15858129-15858360:-|nuORF 2.302733041254933 0.8103549651115762 5 {I|L} 1 7 8.7724 0.0 0.0 0.83979 0.0 0.0 913.497487431704 0.0 913.497487431704 0.0 8.059099143085591 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.83979 + + 8 + 1 2.177 66741.3 1.0 3607 4308 7912 SUDHL4_400M_050219_1,7917 SUDHL4_400M_050219_1,7917,QIMAKRIW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7918 42.088 800.0 138030.0 25 0 5984.7 -1 0 126 917.4304611396 1832.846369346 2 917.9299804568292 MULTI CID FTMS 0 0 0 7912 142342.1875 0.7905990063857843 -3 0.1391563415527343 6 5 [NP]{I|L}[DP]A[DV]QAEN{I|L}DP[EP] 17 -1 + 62.218 0.0 0.0 3.3946 3.3946 75.554 0.0 0.0 0.0 9.77827021048808 7.6955107862172625 7.6955107862172625 1.955198108940074 0 0.2887254899964357 0.8860566476931632 0.0 0.8494850021680094 [NP]{I|L}[DP]A[DV]QAEN{I|L}DP[EP];[NP]{I|L}[DP]{[RE]|[WV]}QAEN{I|L}DP[EP];[NP]{I|L}{[ET]|[MV]}Y[R{M(Oxidation (M))|F}]EN{I|L}DP[EP];[NP]{I|L}[WP][DV]QAEN{I|L}DP[EP];[NP]{I|L}[DP]A[WR]AEN{I|L}DP[EP];[NP][VP]EA[DV]QAEN{I|L}DP[EP];[NP][VP]E{[RE]|[WV]}QAEN{I|L}DP[EP];[MN]P[HK][DV]QAEN{I|L}DP[EP];[NP]M[HK][DV]QAEN{I|L}DP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NEAQ[DV]A[R{M(Oxidation (M))|F}]{[QS]|[NT]} 3.3946;3.2879;3.1968;3.1919;3.0276;2.9701;2.8634;2.8611;2.8105;2.7922 -;-;-;-;-;-;-;-;-;- 2384 1 2.177 76480.9 0.6800000071525574 3608 4308 7912 SUDHL4_400M_050219_1,7918 SUDHL4_400M_050219_1,7918, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7919 42.091 177.0 382780.0 25 0 29553.0 31227 RLRNRYAN 8 110 531.7982000936812 1061.5818472541623 2 531.7988769412041 MULTI CID FTMS 0 0 0 7912 103550.5 0.4430569417545925 -3 0.1391563415527343 7 Unmodified _RLRNRYAN_ ENSG00000181619|ENST00000395116|GPR135 18.13498045792455 0.6430038125133779 5 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]VVY{[QG]|[NA]} 9 4 + 30.677 0.0 0.0 2.8897 2.8897 85.164 0.0 0.0 0.0 0.403624586739685 20.219159051337385 0.403624586739685 30.676733956944137 0 0.805462187404089 0.8239087409443188 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]VVY{[QG]|[NA]} 2.8897 - 58 1 2.177 59217.9 1.0 3609 4308 7912 SUDHL4_400M_050219_1,7919 SUDHL4_400M_050219_1,7919,RLRNRYAN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7920 42.105 800.0 161750.0 25 0 24076.0 + 14872 ILKDMGITEY 10 151 591.8079827899627 1181.6014126467253 2 591.8076660037041 MULTI CID FTMS 0 0 0 7912 93643.28125 0.9320914509280136 -2 0.1023406982421875 8 Unmodified _ILKDMGITEY_ ENSG00000187325|ENST00000341864|TAF9B;ENSG00000273841|ENST00000217893|TAF9;ENST00000480681.1_1_X:77393446-77395117:-|nuORF 32.037481411007896 0.2488723560272515 5 {[ET]|[MV]}WK{I|L}{I|L}TEY 9 6 + 47.034 0.0 0.0 3.9806 3.9806 80.086 0.0 0.0 0.0 2.7422750325201406 2.7422750325201406 2.7422750325201406 4.876954943324549 0 0.6989700043360187 0.0 0.5941876774005249 0.0 {[ET]|[MV]}WK{I|L}{I|L}TEY;[Y{M(Oxidation (M))|F}]T{I|L}{I|L}KD[WP];{[VA]|[{I|L}G]}MDK{I|L}{I|L}TEY;{[ET]|[MV]}WKTE{I|L}{I|L}Y;[Y{M(Oxidation (M))|F}]T{I|L}{I|L}RS[WP];{[DS]|[MA]|[CV]|TT}WR{I|L}{I|L}TEY;{[VA]|[{I|L}G]}MSR{I|L}{I|L}TEY;{I|L}{I|L}[Y{M(Oxidation (M))|F}]TKW[DP];{[VA]|[{I|L}G]}MDKTE{I|L}{I|L}Y;[Y{M(Oxidation (M))|F}]T{I|L}{I|L}K[HN]{M(Oxidation (M))|F} 3.9806;3.5678;3.5451;3.2524;3.0583;3.0356;3.0356;2.895;2.817;2.7469 -;-;-;-;-;-;-;-;-;- 1513 1 2.177 98914.1 0.5899999737739563 3610 4308 7912 SUDHL4_400M_050219_1,7920 SUDHL4_400M_050219_1,7920,ILKDMGITEY False True ILKDMGITEY 42.104814 591.807666003704 536411.25 7912.0 ENSG00000187325|ENST00000341864|TAF9B;;ENST00000480681.1_1_X:77393446-77395117:-|nuORF;;ENSG00000273841|ENST00000217893|TAF9 6.259490172068278 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7922 42.11 40.0 765620.0 25 0 58123.0 + 42666 VTVQRQASV 9 65 494.283182503884 986.551812074568 2 494.2831298708916 MULTI CID FTMS 0 0 0 7921 813452.1875 0.3324862389202206 5 -0.1535186767578125 1 Unmodified _VTVQRQASV_ REV__ENSG00000143061|ENST00000369486|IGSF3;REV__nc|ENSG00000143061|O75054-2|IGSF3 12.531546534597751 0.4974689918368763 5 SV 2 -1 16.722 0.0 0.0 1.695 0.0 0.0 782.4402988683164 0.0 782.4402988683164 0.0 0.5237875363565792 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 SV 1.695 + + 19 + 1 2.177 30678.4 1.0 3611 4309 7921 SUDHL4_400M_050219_1,7922 SUDHL4_400M_050219_1,7922,VTVQRQASV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7923 42.112 89.0 571170.0 25 0 62734.0 + -1 LCRPTLAL 8 99 472.27437761770506 942.53420230221 2 472.2722961306572 MULTI CID FTMS 0 0 0 7921 338730.0625 0.1664622827708276 5 -0.1535186767578125 2 Carbamidomethyl (C) _LC(Carbamidomethyl (C))RPTLAL_ REV__ENSG00000182177|ENST00000409749|ASB18;REV__nc|ENSG00000182177|Q6ZVZ8-2|ASB18 13.50788311687929 0.7113601687236069 5 {I|L} 1 -1 13.979 0.0 0.0 1.4832 0.0 0.0 811.4392448820914 0.0 811.4392448820914 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4832 + + 39 + 1 2.177 48566.1 1.0 3612 4309 7921 SUDHL4_400M_050219_1,7923 SUDHL4_400M_050219_1,7923,LCRPTLAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7925 42.116 104.0 409660.0 25 0 49336.0 + 23159 LSQDHTFF 8 77 497.7367441904725 993.458935447745 2 497.7367736697197 MULTI CID FTMS 0 0 0 7924 373488.625 0.0596272576229823 -8 0.484283447265625 1 Unmodified _LSQDHTFF_ REV__ENSG00000180881|ENST00000699294|CAPS2;REV__nc|ENSG00000180881|Q9BXY5-2|CAPS2;REV__nc|ENSG00000180881|Q9BXY5-5|CAPS2;REV__nc|ENSG00000180881|Q9BXY5|CAPS2 20.871210003555333 0.6025813472596342 5 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TNAT{M(Oxidation (M))|F}{M(Oxidation (M))|F} 8 -1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TNA + + 29.693 19.208 3.3102 2.9888 2.9888 54.162 0.0 0.0 0.0 0.0 3.750612633917001 0.0 0.0 0 0.0 0.0 0.5 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TNAT{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.9888 - 177 + 1 2.177 38455.9 1.0 3613 4310 7924 SUDHL4_400M_050219_1,7925 SUDHL4_400M_050219_1,7925,LSQDHTFF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7926 42.122 282.0 378290.0 25 0 75064.0 42311 VSVHLMPL 8 136 448.2578479504168 894.5011429676335 2 448.2580749392509 MULTI CID FTMS 0 0 0 7924 139674.6875 0.9185630465386316 1 -0.0418548583984375 2 Unmodified _VSVHLMPL_ ENST00000481999.1_1_17:7813558-7814900:+|nuORF 5.760428011301431 0.7893668129297577 5 {I|L} 1 7 12.474 0.0 0.0 1.3945 0.0 0.0 763.4061855475148 0.0 763.4061855475148 0.0 2.4742501084004687 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3945 + + 32 + 1 2.177 85444.7 1.0 3614 4310 7924 SUDHL4_400M_050219_1,7926 SUDHL4_400M_050219_1,7926,VSVHLMPL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7927 42.125 167.0 245250.0 25 0 19573.0 20549 LLLWGPYV 8 88 480.78309222459785 959.5516315159956 2 480.7828246951103 MULTI CID FTMS 0 0 0 7924 265207.46875 0.911297563820925 -3 0.1183624267578125 3 Unmodified _LLLWGPYV_ ENSG00000170837|ENST00000304411|GPR27 6.354104778181461 0.7857632046190106 5 R 1 8 10.596 0.0 0.0 1.1043 0.0 0.0 785.4392027824005 0.0 785.4392027824005 0.0 0.6810987350899467 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.1043 - 18 + 1 2.177 37909.4 1.0 3615 4310 7924 SUDHL4_400M_050219_1,7927 SUDHL4_400M_050219_1,7927,LLLWGPYV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7928 42.129 242.0 341100.0 25 0 37373.0 + 42654 VTVPPGPSL 9 121 433.75257015636254 0 433.7528564333916 PEAK CID FTMS 0 0 0 7924 151525.515625 0.0175641436081919 48 -2.5826072692871094 4 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 39.957323273325 0.0619271662220897 5 V 1 8 6.5938 0.0 0.0 0.76186 0.0 0.0 333.19042976409384 430.2077730768188 763.3982028409126 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + V 0.76186 + + 49 + 1 2.177 66967.7 1.0 3616 4310 7924 SUDHL4_400M_050219_1,7928 SUDHL4_400M_050219_1,7928,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7929 42.133 210.0 229570.0 25 0 21013.0 + + 37864 RLWSAGQPGL 10 86 541.79722185507 1081.57989077694 2 542.7991821169853 MULTI CID FTMS 0 0 0 7924 114546.984375 0.6686657909229732 -3 0.1183624267578125 5 Unmodified _TLVKNDFVF_ ENST00000338338.9_1_1:1309740-1310620:-|nuORF;ENST00000321751.9_1_1:1309740-1310526:-|nuORF;ENST00000378853.3_1_1:1309740-1310526:-|nuORF 7.289230182591677 0.6602208344931196 5 DA[KQ]EQHK 8 -1 32.695 0.0 0.0 3.0229 0.0 0.0 99.1054478375992 0.0 99.1054478375992 0.0 20.476919903378743 0.0 0.0 0 0.0 0.0 0.0 0.0 DA[KQ]EQHK 3.0229 - 105 1 2.177 42179.3 1.0 3617 4310 7924 SUDHL4_400M_050219_1,7929 SUDHL4_400M_050219_1,7929,TLVKNDFVF False False RLWSAGQPGL 42.133343 542.799182116985 2430672.25 7924.0 ENST00000338338.9_1_1:1309740-1310620:-|nuORF;;ENST00000321751.9_1_1:1309740-1310526:-|nuORF;;ENST00000378853.3_1_1:1309740-1310526:-|nuORF 2.876161813735962 2.0 False 10.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7930 42.141 416.0 271870.0 25 0 51409.0 + + 11396 GLWEQENHL 9 137 562.7705237622965 1123.526494591393 2 563.2703735232353 MULTI CID FTMS 0 0 0 7924 103161.1875 0.9266524171319472 -2 0.0537796020507812 6 Unmodified _GGLQEQSSYR_ ENSG00000134152|ENST00000256544|KATNBL1 29.081581746732265 0.3152867722954398 5 [WE][VP]QEWG 8 -1 38.722 0.0 0.0 3.4464 0.0 0.0 0.0 109.0522887909464 109.0522887909464 14.358207755632735 0.0 0.0 0.0 0 0.0 0.0 1.1861818737241734 1.3494850021680094 [WE][VP]QEWG 3.4464 - 594 1 2.177 89772.5 1.0 3618 4310 7924 SUDHL4_400M_050219_1,7930 SUDHL4_400M_050219_1,7930,GGLQEQSSYR False False GLWEQENHL 42.140766 563.270373523235 796924.9375 7924.0 ENSG00000134152|ENST00000256544|KATNBL1 2.726055721441905 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7931 42.145 229.0 302830.0 25 0 39041.0 1456 ALEWVGHTI 9 100 513.2737484059269 1024.5329438786537 2 513.2738525271416 MULTI CID FTMS 0 0 0 7924 90776.328125 0.8806645451757658 3 -0.12847900390625 7 Unmodified _ALEWVGHTI_ ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2 12.531546534597751 0.4974689918368763 5 [{I|L}A]D{I|L}T[HN]{[QN]|[E{I|L}]|[KN]} 9 5 + 29.613 0.0 0.0 2.8904 2.8904 83.298 0.0 0.0 0.0 11.673173347481764 4.920299789533406 4.920299789533406 11.673173347481764 0 0.25 1.6989700043360187 0.0 0.0 [{I|L}A]D{I|L}T[HN]{[QN]|[E{I|L}]|[KN]};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}T[HN]{[QN]|[E{I|L}]|[KN]} 2.8904;1.751 -;- 134 1 2.177 58915.1 1.0 3619 4310 7924 SUDHL4_400M_050219_1,7931 SUDHL4_400M_050219_1,7931,ALEWVGHTI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7932 42.153 472.0 206930.0 25 0 17163.0 + 10510 FVDDYTVRV 9 127 557.2825444174954 1112.550535901791 2 557.2820312380791 MULTI CID FTMS 0 0 0 7924 83832.8125 0.0371842543738158 7 -0.2515296936035156 8 Unmodified _FVDDYTVRV_ ENSG00000115233|ENST00000409682|PSMD14 29.84058131909904 0.1515068451768857 5 TYDDVE 6 6 53.761 0.0 0.0 4.8322 0.0 0.0 372.2483082501969 0.0 372.2483082501969 0.0 39.781381439366186 0.0 0.0 0 0.7614393726401688 0.0 0.3494850021680094 0.0 TYDDVE 4.8322 - 585 1 2.177 77164.5 1.0 3620 4310 7924 SUDHL4_400M_050219_1,7932 SUDHL4_400M_050219_1,7932,FVDDYTVRV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7934 42.16 156.0 467350.0 25 0 49219.0 18817 LARLQGRD 8 94 464.7701311017306 927.5257092702614 2 464.7696411013603 MULTI CID FTMS 0 0 0 7933 308171.65625 0.7629381607680463 4 -0.1492195129394531 1 Unmodified _LARLQGRD_ ENSG00000172425|ENST00000302783|TTC36;ENST00000533501.5_1_11:118398735-118401628:+|nuORF;nc|ENSG00000172425|A6NLP5-2|TTC36 9.347437153973935 0.7675937258251505 5 {I|L} 1 7 10.969 0.0 0.0 1.1826 0.0 0.0 796.4307518501427 0.0 796.4307518501427 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1826 + + 26 + 1 2.185 63370.0 1.0 3621 4311 7933 SUDHL4_400M_050219_1,7934 SUDHL4_400M_050219_1,7934,LARLQGRD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7935 42.169 460.0 207470.0 25 0 10546.0 + 29634 QMISRIEYV 9 127 569.8005908089406 1137.586628684681 2 569.8010742068291 MULTI CID FTMS 0 0 0 7933 78316.59375 0.6104989118291745 -1 0.0418548583984375 2 Unmodified _QMISRIEYV_ ENSG00000113712|ENST00000377843|CSNK1A1;ENSG00000180138|ENST00000379800|CSNK1A1L;nc|ENSG00000113712|P48729-2|CSNK1A1;nc|ENSG00000113712|P48729-3|CSNK1A1 38.17557092003332 0.0854718145212029 5 QM{I|L}[VP]T 6 6 37.981 0.0 0.0 3.3388 0.0 0.0 0.0 465.21601282291255 465.21601282291255 19.131806016604354 0.0 0.0 0.0 0 0.2614393726401688 1.0969100130080565 0.4247425010840047 0.0 QM{I|L}[VP]T 3.3388 - 291 + 1 2.185 76473.8 1.0 3622 4311 7933 SUDHL4_400M_050219_1,7935 SUDHL4_400M_050219_1,7935,QMISRIEYV True True QMISRIEYV 42.168582 569.801074206829 796008.4375 7933.0 nc|ENSG00000113712|P48729-3|CSNK1A1;;ENSG00000113712|ENST00000377843|CSNK1A1;;ENSG00000180138|ENST00000379800|CSNK1A1L;;nc|ENSG00000113712|P48729-2|CSNK1A1 5.854401747385661 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7936 42.171 136.0 634610.0 25 0 58000.0 27751 PLPAVLGG 8 126 362.2222906540445 722.430028374889 2 362.2222167849541 MULTI CID FTMS 0 0 0 7933 382351.78125 1.0 0 0.0 3 Unmodified _PLPAVLGG_ ENST00000473501.1_1_3:196753297-196754890:-|nuORF 2.889219685676258 0.8067950007271085 5 V 1 7 3.9794 0.0 0.0 0.55084 0.0 0.0 360.21049820086404 260.1295565240844 620.3400547249485 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.55084 + + 9 + 1 2.185 72052.4 1.0 3623 4311 7933 SUDHL4_400M_050219_1,7936 SUDHL4_400M_050219_1,7936,PLPAVLGG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7937 42.175 165.0 408810.0 25 0 52013.0 + -1 LMIQFHIKILQ 11 59 467.2771463759434 1398.8096097280302 3 467.2774230837822 MULTI CID FTMS 0 0 0 7933 281634.96875 1.0 0 0.0 4 Oxidation (M) _LM(Oxidation (M))IQFHIKILQ_ REV__chr7:45060308-45063918|11|11.55|0.43|4.75|+|0|TE_info:L1MCa,L1MCa_dup3078,L1,LINE,donor,-,45059766,45060308|None,CCM2|1 4.715918219556657 0.8528979259967293 5 {I|L}AVA 4 -1 30.165 0.0 0.0 2.1565 0.0 0.0 1026.572747998497 0.0 1026.572747998497 0.0 19.195925227640984 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}AVA 2.1565 - 22 1 2.185 62347.7 1.0 3624 4311 7933 SUDHL4_400M_050219_1,7937 SUDHL4_400M_050219_1,7937,LMIQFHIKILQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7938 42.188 800.0 174680.0 25 0 14427.0 -1 0 119 910.4224202248106 1818.830287516421 2 910.9231445193292 MULTI CID FTMS 0 0 0 7933 119161.015625 1.0 0 0.0 5 5 [MN][{I|L}P]NNADQ 9 -1 33.795 0.0 0.0 1.8581 0.0 0.0 0.0 818.3809298150999 818.3809298150999 17.51882022244333 0.0 0.0 0.0 0 0.2614393726401688 1.3979400086720375 0.0 0.0 [MN][{I|L}P]NNADQ 1.8581 - 1098 + 1 2.185 97959.3 0.6600000262260437 3625 4311 7933 SUDHL4_400M_050219_1,7938 SUDHL4_400M_050219_1,7938, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7939 42.194 299.0 377320.0 25 0 41348.0 + 11574 GKGSGPQAA 9 134 386.7021235350579 771.3896941369159 2 386.7029907107353 MULTI CID FTMS 0 0 0 7933 104808.0078125 0.5355634823625749 -2 0.0486106872558593 6 Unmodified _GKGSGPQAA_ REV__ENSG00000138385|ENST00000260956|SSB 9.38312468134398 0.5871240394367778 5 {[{M(Oxidation (M))|F}D]|MM}{I|L}Q{I|L}H 6 -1 + 24.372 0.0 0.0 3.1595 3.1595 75.554 0.0 0.0 0.0 6.478174818886373 2.430380486862944 2.430380486862944 2.430380486862944 0 0.3252574989159953 0.0 0.0 0.3494850021680094 {[{M(Oxidation (M))|F}D]|MM}{I|L}Q{I|L}H;{[{M(Oxidation (M))|F}D]|MM}{I|L}QH{I|L};{[{M(Oxidation (M))|F}D]|MM}{I|L}[AG]{I|L}H;{[{M(Oxidation (M))|F}D]|MM}{I|L}[AG]H{I|L} 3.1595;2.8444;1.4852;1.1702 -;-;-;- 69 + 1 2.185 90359.3 1.0 3626 4311 7933 SUDHL4_400M_050219_1,7939 SUDHL4_400M_050219_1,7939,GKGSGPQAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7941 42.199 30.0 1539500.0 25 0 356940.0 + 31664 RRGRTVAW 8 73 501.2904933380042 1000.5664337428084 2 501.2908203005791 MULTI CID FTMS 0 0 0 7940 1781007.75 0.6266096493068227 8 -0.3285255432128906 1 Unmodified _RRGRTVAW_ REV__ENSG00000110811|ENST00000290510|P3H3;REV__nc|ENSG00000110811|Q8IVL6-2|P3H3 0.7936320650641473 0.8195151834710337 5 A 1 -1 2.2185 0.0 0.0 0.22172 0.0 0.0 714.4247844281585 212.0856569879516 926.51044141611 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.22172 + + 3 + 1 2.185 38058.2 1.0 3627 4312 7940 SUDHL4_400M_050219_1,7941 SUDHL4_400M_050219_1,7941,RRGRTVAW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7942 42.2 50.0 1143800.0 25 0 198770.0 9255 FHKPGLEK 8 80 478.2699254430515 954.525297952903 2 478.2695800662041 MULTI CID FTMS 0 0 0 7940 936060.8125 0.2775570524674027 8 -0.3285255432128906 2 Unmodified _FHKPGLEK_ ENSG00000173705|ENST00000309558|SUSD5 2.577480529830294 0.808687252328423 5 {I|L} 1 7 9.8329 0.0 0.0 1.0301 0.0 0.0 823.430508379464 0.0 823.430508379464 0.0 9.832881222565248 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0301 + + 2 + 1 2.185 50064.5 1.0 3628 4312 7940 SUDHL4_400M_050219_1,7942 SUDHL4_400M_050219_1,7942,FHKPGLEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7943 42.201 56.0 895610.0 25 0 139810.0 + 23552 LTLQRGSH 8 77 456.2566733366788 910.4987937401576 2 456.2566100955009 MULTI CID FTMS 0 0 0 7940 1020920.9375 1.0 0 0.0 3 Unmodified _LTLQRGSH_ REV__ENSG00000036257|ENST00000264414|CUL3;REV__nc|ENSG00000036257|Q13618-2|CUL3;REV__nc|ENSG00000036257|Q13618-3|CUL3 2.302733041254933 0.8103549651115762 5 E 1 -1 1.5938 0.0 0.0 0.17505 0.0 0.0 344.2054720622264 434.2376803033813 778.4431523656077 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.17505 - 2 + 1 2.185 43099.8 1.0 3629 4312 7940 SUDHL4_400M_050219_1,7943 SUDHL4_400M_050219_1,7943,LTLQRGSH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7944 42.203 87.0 629860.0 25 0 110850.0 + 9363 FINVVARIS 9 88 509.8038158528666 1017.5930787725332 2 509.8040649294853 MULTI CID FTMS 0 0 0 7940 581305.375 0.5846409342300746 5 -0.1692466735839843 4 Unmodified _FINVVARIS_ REV__ENSG00000101438|ENST00000217420|SLC32A1;REV__SLC32A1|p.V387M|1|0.26|ENSG00000101438|chr20:38728220-38728220|G/A|missense_variant 4.3292370932331545 0.7635526921153418 5 {I|L} 1 -1 10.0 0.0 0.0 0.98271 0.0 0.0 886.4979687645239 0.0 886.4979687645239 0.0 1.1776422345377426 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.98271 + + 12 + 1 2.185 48202.5 1.0 3630 4312 7940 SUDHL4_400M_050219_1,7944 SUDHL4_400M_050219_1,7944,FINVVARIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7945 42.205 92.0 494510.0 25 0 16728.0 + 29864 QQVPVNQVF 9 80 529.7850722488258 1057.5555915644516 2 529.7852661013603 MULTI CID FTMS 0 0 0 7940 455291.6875 0.5787803313428524 -3 0.0890388488769531 5 Unmodified _QQVPVNQVF_ ENSG00000100316|ENST00000216146|RPL3;ENST00000474162.1_1_5:60686735-60687614:-|nuORF;ENST00000481985.5_1_22:39710087-39711482:-|nuORF 67.34385681178166 0.0221257235307089 5 {[QN]|[E{I|L}]|[KN]}{I|L}PVNQV{M(Oxidation (M))|F} 9 2 + 77.259 0.0 0.0 7.3055 7.3055 90.048 0.0 0.0 0.0 6.306423891230395 8.824995917031941 6.306423891230395 6.306423891230395 0 0.6237125054200234 0.0 1.5356668758921828 1.9802046884880933 {[QN]|[E{I|L}]|[KN]}{I|L}PVNQV{M(Oxidation (M))|F};[AG]N{I|L}PVNQV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}PVN[AG]V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}PVGGQV{M(Oxidation (M))|F};[AG]QVPVNQV{M(Oxidation (M))|F};[AG]N{I|L}PVN[AG]V{M(Oxidation (M))|F};[AG]N{I|L}PVGGQV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}PVGG[AG]V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[VP]{I|L}NQV{M(Oxidation (M))|F};QQVPVNQV{M(Oxidation (M))|F} 7.3055;6.7092;6.4348;6.4348;6.1815;5.8426;5.8426;5.5682;5.4637;5.3257 -;-;-;-;-;-;-;-;-;+ + 587 1 2.185 44503.9 1.0 3631 4312 7940 SUDHL4_400M_050219_1,7945 SUDHL4_400M_050219_1,7945,QQVPVNQVF True True QQVPVNQVF 42.205359 529.78526610136 11889526.0 7940.0 ENST00000481985.5_1_22:39710087-39711482:-|nuORF;;ENSG00000100316|ENST00000216146|RPL3;;ENST00000474162.1_1_5:60686735-60687614:-|nuORF 8.287160555521647 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7946 42.208 116.0 485220.0 25 0 20052.0 -1 0 87 901.4175189622986 1800.820484991397 2 901.9191161990166 MULTI CID FTMS 0 0 0 7940 368042.15625 0.5567682040836085 -2 0.0822830200195312 6 5 [MN]PN{I|L}NA[{M(Oxidation (M))|F}E]SVRVE 14 -1 67.511 0.0 0.0 3.7489 0.0 0.0 0.0 197.0391787164672 197.0391787164672 45.688652892276366 0.0 0.0 0.0 0 0.6694451763165201 1.5228787452803376 0.0 0.4247425010840047 [MN]PN{I|L}NA[{M(Oxidation (M))|F}E]SVRVE 3.7489 - 1440 + 1 2.185 42177.4 1.0 3632 4312 7940 SUDHL4_400M_050219_1,7946 SUDHL4_400M_050219_1,7946, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7947 42.218 565.0 348960.0 25 0 33928.0 + 16340 IYLEKLKTI 9 147 560.8526597200597 1119.690766506919 2 560.8527709841728 MULTI CID FTMS 0 0 0 7940 169999.8125 0.5716942714384274 -3 0.0890388488769531 7 Unmodified _IYLEKLKTI_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 128.57297698046145 0.0057676723676998 5 {I|L}Y{I|L}EK{I|L}KT{I|L} 9 0 + 125.6 0.0 0.0 11.217 11.217 99.666 0.0 0.0 0.0 66.53416010633559 12.587418566968154 12.587418566968154 56.40151503023925 0 2.7743361311955184 2.0 2.48239816956497 0.0 + + {I|L}Y{I|L}EK{I|L}KT{I|L};[Y{I|L}]{I|L}EKKT{I|L}{I|L};[Y{I|L}]E{I|L}KKT{I|L}{I|L};[VS]A{I|L}{I|L}KT{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}KT{I|L}Y{I|L};[VS]A{I|L}{I|L}YKT{I|L}{I|L};[VS]A{I|L}{I|L}KTY{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}YKT{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}KTY{I|L}{I|L};[Y{I|L}]EK{I|L}KT{I|L}{I|L} 11.217;6.18;5.6469;5.6463;5.5707;5.4968;5.489;5.4213;5.4135;5.2003 +;-;-;-;-;-;-;-;-;- + 3138 + 1 2.185 150255.0 1.0 3633 4312 7940 SUDHL4_400M_050219_1,7947 SUDHL4_400M_050219_1,7947,IYLEKLKTI True True IYLEKLKTI 42.217717 560.852770984173 1426514.875 7940.0 nc|ENSG00000178209|Q15149-5|PLEC;;nc|ENSG00000178209|Q15149-8|PLEC;;nc|ENSG00000178209|Q15149-6|PLEC;;nc|ENSG00000178209|Q15149|PLEC;;nc|ENSG00000178209|Q15149-9|PLEC;;nc|ENSG00000178209|Q15149-3|PLEC;;nc|ENSG00000178209|Q15149-7|PLEC;;nc|ENSG00000178209|Q15149-2|PLEC;;ENSG00000178209|ENST00000345136|PLEC 3.524885495503744 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7948 42.222 221.0 252480.0 25 0 19774.0 -1 LSIGYGDMVP 10 106 534.2580725980991 1066.5015922629982 2 534.2585937380791 MULTI CID FTMS 0 0 0 7940 162924.25 1.0 0 0.0 8 Oxidation (M) _LSIGYGDM(Oxidation (M))VP_ ENSG00000080709|ENST00000673685|KCNN2;ENSG00000105642|ENST00000684775|KCNN1;ENSG00000143603|ENST00000271915|KCNN3;nc|ENSG00000080709|Q9H2S1-2|KCNN2;nc|ENSG00000080709|Q9H2S1|KCNN2;nc|ENSG00000105642|Q92952-2|KCNN1;nc|ENSG00000143603|Q9UGI6-2|KCNN3;nc|ENSG00000143603|Q9UGI6-3|KCNN3 20.453626601364224 0.5043500229302764 5 [{I|L}T][YG]V 5 -1 25.845 0.0 0.0 2.4233 0.0 0.0 0.0 530.2000720898253 530.2000720898253 8.225351633084635 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.25 0.0 [{I|L}T][YG]V 2.4233 - 225 1 2.185 51575.3 1.0 3634 4312 7940 SUDHL4_400M_050219_1,7948 SUDHL4_400M_050219_1,7948,LSIGYGDMVP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7949 42.23 472.0 276990.0 25 0 28735.0 41054 VMLENYRNP 9 146 568.2817339178956 1134.5489149025912 2 568.2812988162041 MULTI CID FTMS 0 0 0 7940 141500.875 1.0 0 0.0 9 Unmodified _VMLENYRNP_ ENST00000361362.6_1_5:178322903-178343648:+|nuORF;ENST00000425869.1_22:16634899-16650863:+|nuORF;ENST00000520660.5_1_5:178322903-178343648:+|nuORF 26.88365393820708 0.1891292719743517 5 VME[HA][QP]{I|L}PN 10 7 + 60.287 0.0 0.0 5.3137 5.3137 85.683 0.0 0.0 0.0 25.28414641425321 4.140705543519914 4.140705543519914 7.1785534849639205 0 0.3054621874040891 1.6989700043360187 0.7134679910804405 0.5994850021680094 VME[HA][QP]{I|L}PN;VME[HA][QP]{I|L}NP;VM[{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))R]{I|L}PN;VME[HA][QP]QPV;VMHH[C(Carbamidomethyl (C))K]{I|L}PN;VME[HA][QP]{I|L}GGP;V{M(Oxidation (M))|F}TE[C(Carbamidomethyl (C))R]{I|L}PN;VM[{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))R]{I|L}NP;VMWW[R{M(Oxidation (M))|F}]PN;VME[HA][QP]N{I|L}P 5.3137;4.681;4.1945;3.8939;3.8841;3.6477;3.5689;3.5618;3.4516;3.4431 -;-;-;-;-;-;-;-;-;- 2070 + 1 2.185 106253.5 1.0 3635 4312 7940 SUDHL4_400M_050219_1,7949 SUDHL4_400M_050219_1,7949,VMLENYRNP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7950 42.239 487.0 267150.0 25 0 25571.0 + 14751 ILDEMSHKLRL 11 155 452.2538312067038 1353.7396642203114 3 452.2535888552666 MULTI CID FTMS 0 0 0 7940 92782.8984375 0.6370551944126381 -1 0.0404281616210937 10 Unmodified _ILDEMSHKLRL_ ENSG00000116906|ENST00000366647|GNPAT;nc|ENSG00000116906|O15228-2|GNPAT 17.571907917122694 0.6696309617885002 5 {I|L}{I|L}{I|L} 3 8 48.812 0.0 0.0 3.6057 0.0 0.0 0.0 1011.469584521605 1011.469584521605 31.82258126592544 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.0 {I|L}{I|L}{I|L} 3.6057 - 144 + 1 2.185 102939.2 1.0 3636 4312 7940 SUDHL4_400M_050219_1,7950 SUDHL4_400M_050219_1,7950,ILDEMSHKLRL False True ILDEMSHKLRL 42.238884 452.253588855267 695223.6875 7940.0 ENSG00000116906|ENST00000366647|GNPAT;;nc|ENSG00000116906|O15228-2|GNPAT 4.186070839564006 3.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7951 42.24 44.0 1041600.0 25 0 54308.0 -1 0 63 873.9156162210019 1745.8166795088036 2 873.9219848513603 MULTI CID FTMS 0 0 0 7940 964777.3125 0.165471179458383 7 -0.2679443359375 11 5 [NP]{I|L}N{[CA]|SS}[H{I|L}]AQD 11 -1 33.231 0.0 0.0 1.9035 0.0 0.0 0.0 566.2297403869651 566.2297403869651 5.555173278498316 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [NP]{I|L}N{[CA]|SS}[H{I|L}]AQD 1.9035 - 268 1 2.185 39428.5 1.0 3637 4312 7940 SUDHL4_400M_050219_1,7951 SUDHL4_400M_050219_1,7951, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7953 42.245 91.0 647130.0 25 0 78934.0 14839 ILGAKWRE 8 93 486.78367774622353 971.5528025592472 2 486.7839538455009 MULTI CID FTMS 0 0 0 7952 308037.09375 0.4015446445462415 8 -0.3346710205078125 1 Unmodified _ILGAKWRE_ ENSG00000170004|ENST00000330494|CHD3;ENST00000572579.1_1_17:7796637-7797935:+|nuORF;nc|ENSG00000170004|Q12873-2|CHD3;nc|ENSG00000170004|Q12873-3|CHD3 11.114462752807354 0.7467182956244686 5 {I|L}{I|L}GS 4 5 15.662 0.0 0.0 1.612 0.0 0.0 0.0 598.3096744677033 598.3096744677033 4.24185445281859 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {I|L}{I|L}GS 1.612 - 45 1 2.185 51479.8 1.0 3638 4313 7952 SUDHL4_400M_050219_1,7953 SUDHL4_400M_050219_1,7953,ILGAKWRE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7954 42.258 781.0 197940.0 25 0 7566.7 -1 KYYLCFYLFVL 11 155 764.8969899269358 1527.7794269206715 2 764.8970214724541 MULTI CID FTMS 0 0 0 7952 212509.375 0.6374806526126507 3 -0.0952033996582031 2 Carbamidomethyl (C) _KYYLC(Carbamidomethyl (C))FYLFVL_ MER57F_dup142|chr6:29552528-29552933:-|5.889111264267852|0.0722232426967899|6.35|48.0|19|3|sense 8.745405648335112 0.8338865417133445 5 {[SA]|[TG]}NV[WR]PSQSANV{I|L} 14 -1 + 101.36 0.0 0.0 6.6348 6.6348 84.31 0.0 0.0 0.0 6.234230429434874 16.667853209646168 6.234230429434874 1.804782212094338 0 0.6989700043360187 0.7695510786217261 2.1989700043360187 0.4247425010840047 {[SA]|[TG]}NV[WR]PSQSANV{I|L};{[SA]|[TG]}GGV[WR]PSQSANV{I|L};{[QG]|[NA]}SV[WR]PSQSANV{I|L};{[QS]|[NT]}GV[WR]PSQSANV{I|L};{[SA]|[TG]}NV[WR]PS[AG]SANV{I|L};{[SA]|[TG]}NV[WR]PSQSAGGV{I|L};{[SA]|[TG]}NV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[HK]QSANV{I|L};{[SA]|[TG]}GGV[WR]PS[AG]SANV{I|L};{[SA]|[TG]}GGV[WR]PSQSAGGV{I|L};{[SA]|[TG]}GGV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[HK]QSANV{I|L} 6.6348;6.5166;6.2267;6.1282;6.0424;6.0424;6.0303;5.9255;5.9255;5.9122 -;-;-;-;-;-;-;-;-;- 8098 1 2.185 108494.9 1.0 3639 4313 7952 SUDHL4_400M_050219_1,7954 SUDHL4_400M_050219_1,7954,KYYLCFYLFVL False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 7956 42.263 43.0 1506000.0 25 0 195210.0 + 16194 IVIDPKNPL 9 78 504.8080128678075 1007.6014728024152 2 504.8081848025322 MULTI CID FTMS 0 0 0 7955 1119691.5 0.4864120076083634 -4 0.1467628479003906 1 Unmodified _IVIDPKNPL_ ENSG00000004897|ENST00000066544|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 41.8396318013385 0.0653578398400075 5 [{I|L}V]{I|L}DPKN[{I|L}P] 9 0 + 59.874 0.0 0.0 5.9422 5.9422 83.624 0.0 0.0 0.0 26.27783598999231 2.998037644757048 2.998037644757048 2.998037644757048 0 0.8494850021680094 2.0 0.0 0.6307196863200843 + + [{I|L}V]{I|L}DPKN[{I|L}P];[{I|L}V]{I|L}DPK[QP]V;[{I|L}V]{I|L}DPKGG[{I|L}P];[KP]ND{I|L}[{I|L}V][{I|L}P];[KP]DN{I|L}[{I|L}V][{I|L}P];[NP]KD{I|L}[{I|L}V][{I|L}P];[KP]N{I|L}D[{I|L}V][{I|L}P];[KP]GGD{I|L}[{I|L}V][{I|L}P];[NP]K{I|L}D[{I|L}V][{I|L}P];[KP]DGG{I|L}[{I|L}V][{I|L}P] 5.9422;5.6447;4.7252;3.3343;2.7367;2.7367;2.4392;2.4204;1.8417;1.8229 +;-;-;-;-;-;-;-;-;- + 325 + 1 2.185 53246.0 1.0 3640 4314 7955 SUDHL4_400M_050219_1,7956 SUDHL4_400M_050219_1,7956,IVIDPKNPL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7957 42.265 93.0 636770.0 25 0 109660.0 + 42980 VVTPLPAA 8 90 384.2354781669175 766.4564034006349 2 384.2354308962822 MULTI CID FTMS 0 0 0 7955 639762.1875 0.0532054110972189 10 -0.7252883911132812 2 Unmodified _VVTPLPAA_ REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF 0.0 0.8243325171867699 5 T 1 -1 2.4743 0.0 0.0 0.32282 0.0 0.0 383.24532659575056 279.1456392877563 662.3909658835069 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.32282 + + 4 + 1 2.185 51799.2 1.0 3641 4314 7955 SUDHL4_400M_050219_1,7957 SUDHL4_400M_050219_1,7957,VVTPLPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7958 42.268 145.0 446820.0 25 0 78407.0 + 41917 VQGIFVEKY 9 90 541.79722185507 1081.57989077694 2 541.7972289919853 MULTI CID FTMS 0 0 0 7955 248561.828125 0.5731516080894868 -3 0.1049079895019531 3 Unmodified _VQGIFVEKY_ ENSG00000116473|ENST00000369709|RAP1A;ENSG00000127314|ENST00000250559|RAP1B;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-2|RAP1B;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000254893|A6NIZ1|RAP1BL 38.17557092003332 0.0854718145212029 5 {[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}{M(Oxidation (M))|F}VEKY 9 0 {[QV]|[N{I|L}]|[RA]|[KV]}G{I|L} + + 27.14 22.686 5.711 2.5093 2.5093 53.414 0.0 0.0 0.0 0.0 3.5834938564822494 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}{M(Oxidation (M))|F}VEKY 2.5093 + + 248 + 1 2.185 59639.7 1.0 3642 4314 7955 SUDHL4_400M_050219_1,7958 SUDHL4_400M_050219_1,7958,VQGIFVEKY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7959 42.272 213.0 355420.0 25 0 71470.0 + 8924 FALLCCIVT 9 86 491.75960273801246 981.5046525428248 2 491.7593566775322 MULTI CID FTMS 0 0 0 7955 232624.703125 0.7151923124222261 -3 0.1049079895019531 4 Unmodified _FALLCCIVT_ REV__ENSG00000072041|ENST00000266682|SLC6A15;REV__nc|ENSG00000072041|Q9H2J7-3|SLC6A15 28.486842064014134 0.1687311288560894 5 {M(Oxidation (M))|F}V 2 -1 33.812 0.0 0.0 3.4449 0.0 0.0 0.0 732.3629854791624 732.3629854791624 13.36213246611864 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {M(Oxidation (M))|F}V 3.4449 - 101 + 1 2.185 63693.2 1.0 3643 4314 7955 SUDHL4_400M_050219_1,7959 SUDHL4_400M_050219_1,7959,FALLCCIVT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7960 42.278 314.0 223880.0 25 0 31942.0 + 18381 KVPQLEIVPN 10 108 568.8377557272232 1135.6609585212464 2 568.8386108279228 MULTI CID FTMS 0 0 0 7955 130315.15625 1.0 0 0.0 5 Unmodified _KVPQLEIVPN_ CON__P02662 14.40537977576856 0.6058337302021266 5 NQ{I|L}VKVPN 8 5 44.505 0.0 0.0 3.9188 0.0 0.0 225.1481190412125 0.0 225.1481190412125 0.0 32.91091137185069 0.0 0.0 0 0.8882104921644451 0.0 0.0 0.2742275032520141 NQ{I|L}VKVPN 3.9188 - 1251 1 2.185 60217.7 1.0 3644 4314 7955 SUDHL4_400M_050219_1,7960 SUDHL4_400M_050219_1,7960,KVPQLEIVPN False True False False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 7961 42.282 235.0 247800.0 25 0 16338.0 -1 VTCPSINSF 9 103 512.7416571653569 1023.4687613975136 2 512.7422973513603 MULTI CID FTMS 0 0 0 7955 107301.8671875 0.5084453380056498 -3 0.1049079895019531 6 Carbamidomethyl (C) _VTC(Carbamidomethyl (C))PSINSF_ ENSG00000164796|ENST00000297405|CSMD3;nc|ENSG00000164796|Q7Z407-2|CSMD3;nc|ENSG00000164796|Q7Z407-4|CSMD3 36.04419817259434 0.0971720506436186 5 V 1 -1 12.764 0.0 0.0 1.2472 0.0 0.0 906.3893069070824 0.0 906.3893069070824 0.0 1.7900252671235606 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2472 + + 123 + 1 2.185 49623.5 1.0 3645 4314 7955 SUDHL4_400M_050219_1,7961 SUDHL4_400M_050219_1,7961,VTCPSINSF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7962 42.296 800.0 163330.0 25 0 8623.5 + 1920 AMFEPDMQEA 10 163 584.736408896605 1167.45826486001 2 584.7364379763603 MULTI CID FTMS 0 0 0 7955 92503.453125 0.8727615037502651 -1 0.0182838439941406 7 Unmodified _AMFEPDMQEA_ ENSG00000184675|ENST00000374869|AMER1;nc|ENSG00000184675|Q5JTC6-2|AMER1 19.256988751693697 0.5244284437930726 5 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E[HK]Y 7 6 27.184 0.0 0.0 2.3285 0.0 0.0 0.0 258.03357621328024 258.03357621328024 8.650471252436322 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}E[HK]Y 2.3285 - 540 1 2.185 99408.7 0.550000011920929 3646 4314 7955 SUDHL4_400M_050219_1,7962 SUDHL4_400M_050219_1,7962,AMFEPDMQEA False True AMFEPDMQEA 42.296071 584.73643797636 570095.0 7955.0 nc|ENSG00000184675|Q5JTC6-2|AMER1;;ENSG00000184675|ENST00000374869|AMER1 5.5919192632039385 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7963 42.303 367.0 199360.0 25 0 17537.0 + 11606 GLADASLLKKV 11 100 557.8453680950106 1113.676183256821 2 557.8452026247978 MULTI CID FTMS 0 0 0 7955 94322.34375 0.824338385907415 -1 0.0182838439941406 8 Unmodified _GLADASLLKKV_ ENSG00000130638|ENST00000252934|ATXN10;nc|ENSG00000130638|Q9UBB4-2|ATXN10 35.61225514009592 0.279986979807413 5 {[VA]|[{I|L}G]}ADAS{I|L}{I|L}KKV 11 0 + 82.382 0.0 0.0 7.3973 7.3973 96.92 0.0 0.0 0.0 56.80073127114949 10.949892252487588 10.949892252487588 42.33678932615502 0 1.2302046884880935 2.0 0.0 0.2134679910804404 + + {[VA]|[{I|L}G]}ADAS{I|L}{I|L}KKV;{[VA]|[{I|L}G]}ADT{I|L}KK[R{I|L}];{[VA]|[{I|L}G]}TD{I|L}KKA[R{I|L}];{[VA]|[{I|L}G]}TDA{I|L}KK[R{I|L}];{[VA]|[{I|L}G]}T{I|L}DKKA[R{I|L}];{[VA]|[{I|L}G]}TD{I|L}AKK[R{I|L}];{[VA]|[{I|L}G]}T{I|L}DAKK[R{I|L}];{[VA]|[{I|L}G]}T{I|L}[TA][KA]A[R{I|L}];[Q{I|L}]DT{I|L}KK[R{I|L}];{[TV]|[{I|L}S]}AD{I|L}KKA[R{I|L}] 7.3973;3.5957;2.9682;2.8077;2.4552;2.3817;1.8687;1.7445;1.0347;0.80558 +;-;-;-;-;-;-;-;-;- + 428 + 1 2.185 59599.9 1.0 3647 4314 7955 SUDHL4_400M_050219_1,7963 SUDHL4_400M_050219_1,7963,GLADASLLKKV False True GLADASLLKKV 42.30269 557.845202624798 690713.9375 7955.0 nc|ENSG00000130638|Q9UBB4-2|ATXN10;;ENSG00000130638|ENST00000252934|ATXN10 6.6166534423828125 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7965 42.316 539.0 245260.0 25 0 26802.0 + 12974 HAIPPTLAM 9 156 475.7597802154014 949.5050074976028 2 475.7603332400322 MULTI CID FTMS 0 0 0 7964 134828.34375 0.0981582498161057 64 -3.850383758544922 1 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 5 [TP]P{I|L}HA{I|L}AM 9 6 + 38.682 0.0 0.0 4.0739 4.0739 76.91 0.0 0.0 0.0 1.8101603308343428 10.031772573037266 1.8101603308343428 1.8101603308343428 0 0.8182503180159344 0.0 1.8098943791441968 0.0 [TP]P{I|L}HA{I|L}AM;[{I|L}A]HP[TP]{I|L}AM;[HA]{I|L}P[TP]{I|L}AM;[TP]P{I|L}AH{I|L}AM;[YG]{I|L}[TP]PR{M(Oxidation (M))|F};[{M(Oxidation (M))|F}T]{I|L}{I|L}[RV]AM;[YG]{I|L}[TP]R{I|L}M;[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}A{I|L}AM;[{M(Oxidation (M))|F}T]{I|L}{I|L}GPR{M(Oxidation (M))|F};[TP]P{I|L}HAAP{M(Oxidation (M))|F} 4.0739;3.8832;3.8333;3.6112;3.0173;2.6958;2.6655;2.3217;2.249;2.0949 -;-;+;-;-;-;-;-;-;- + 656 1 2.185 102308.2 1.0 3648 4315 7964 SUDHL4_400M_050219_1,7965 SUDHL4_400M_050219_1,7965,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7966 42.329 800.0 246750.0 25 0 14115.0 + -1 AGIPAGGVL 9 111 754.3649770503075 3013.43080233483 4 754.6165038943291 MULTI CID FTMS 0 0 0 7964 178472.984375 1.0 0 0.0 2 nc|ENSG00000105281|Q15758-2|SLC1A5;ENSG00000105281|ENST00000542575|SLC1A5;nc|ENSG00000105281|Q15758-3|SLC1A5 5 [MN]PN{I|L} 5 -1 50.273 0.0 0.0 1.6683 0.0 0.0 0.0 2441.144486630159 2441.144486630159 31.14339677331329 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.4247425010840047 [MN]PN{I|L} 1.6683 - 2231 + 1 2.185 141634.2 0.7699999809265137 3649 4315 7964 SUDHL4_400M_050219_1,7966 SUDHL4_400M_050219_1,7966, False False AGIPAGGVL 42.329356 754.366 2402566.75 7964.0 nc|ENSG00000105281|Q15758-2|SLC1A5;;ENSG00000105281|ENST00000542575|SLC1A5;;nc|ENSG00000105281|Q15758-3|SLC1A5 2.368437528610229 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7967 42.335 330.0 307190.0 25 0 33475.0 + 10498 FTVPDTREL 9 115 539.2824258240306 1076.5502987148611 2 539.2825805544853 MULTI CID FTMS 0 0 0 7964 173359.515625 0.3156859572870844 -3 0.1087913513183593 3 Unmodified _FTVPDTREL_ ENSG00000119522|ENST00000394215|DENND1A;ENST00000473039.5_1_9:126143713-126520026:-|nuORF;ENST00000474676.1_1_9:126331853-126520026:-|nuORF;nc|ENSG00000119522|Q8TEH3-2|DENND1A;nc|ENSG00000119522|Q8TEH3-3|DENND1A;nc|ENSG00000119522|Q8TEH3-4|DENND1A;nc|ENSG00000119522|Q8TEH3-5|DENND1A;nc|ENSG00000119522|Q8TEH3-6|DENND1A;nc|ENSG00000119522|Q8TEH3-7|DENND1A;nc|ENSG00000119522|Q8TEH3|DENND1A 31.26834338654808 0.1333407332142048 5 [{I|L}T][R{M(Oxidation (M))|F}]DPVTE 9 7 + 63.667 0.0 0.0 5.914 5.914 91.059 0.0 0.0 0.0 10.673399554022026 13.792031719786522 10.673399554022026 10.673399554022026 0 0.3807196863200844 1.154901959985743 0.5629529932484498 0.3807196863200844 [{I|L}T][R{M(Oxidation (M))|F}]DPVTE;{[ET]|[MV]}V[R{M(Oxidation (M))|F}]PVTE;{M(Oxidation (M))|F}TVPD{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};{M(Oxidation (M))|F}TVPD{I|L}[VG]{[ET]|[MV]};[{I|L}T]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RD]VTE;[KA]{[QS]|[NT]}{[MS]|[{M(Oxidation (M))|F}A]}PVTE;{M(Oxidation (M))|F}TV{I|L}[WD]T[VP];[KA]{[QS]|[NT]}{[DS]|[MA]|[CV]|TT}{I|L}VTE;{[TV]|[{I|L}S]}[DV]{[DS]|[MA]|[CV]|TT}{I|L}VTE;[{M(Oxidation (M))|F}T][{I|L}P][RD]VTE 5.914;4.9225;4.2157;4.194;3.8926;3.2957;3.0072;2.7364;2.6576;2.5688 -;-;-;-;-;-;-;-;-;- 522 1 2.185 84897.7 1.0 3650 4315 7964 SUDHL4_400M_050219_1,7967 SUDHL4_400M_050219_1,7967,FTVPDTREL False True FTVPDTREL 42.33536 539.282580554485 3003332.25 7964.0 nc|ENSG00000119522|Q8TEH3-3|DENND1A;;nc|ENSG00000119522|Q8TEH3-5|DENND1A;;ENST00000473039.5_1_9:126143713-126520026:-|nuORF;;nc|ENSG00000119522|Q8TEH3-2|DENND1A;;nc|ENSG00000119522|Q8TEH3|DENND1A;;nc|ENSG00000119522|Q8TEH3-4|DENND1A;;ENSG00000119522|ENST00000394215|DENND1A;;ENST00000474676.1_1_9:126331853-126520026:-|nuORF;;nc|ENSG00000119522|Q8TEH3-7|DENND1A;;nc|ENSG00000119522|Q8TEH3-6|DENND1A 4.73977533976237 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7969 42.34 107.0 669350.0 25 0 94184.0 + 33181 SFEPILRAL 9 101 523.303636221613 1044.592719510026 2 523.3035766482353 MULTI CID FTMS 0 0 0 7968 310857.0 0.3238883227786773 14 -1.012065887451172 1 Unmodified _SFEPILRAL_ REV__ENSG00000140675|ENST00000330498|SLC5A2 4.3292370932331545 0.7635526921153418 5 V 1 -1 10.089 0.0 0.0 0.9658 0.0 0.0 927.5133565723291 0.0 927.5133565723291 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.9658 - 18 + 1 2.185 60656.9 1.0 3651 4316 7968 SUDHL4_400M_050219_1,7969 SUDHL4_400M_050219_1,7969,SFEPILRAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7970 42.343 125.0 455990.0 25 0 68193.0 + + 14385 FLEEANRVL 9 81 545.3170279349571 1088.619502936714 2 545.3170654177666 MULTI CID FTMS 0 0 0 7968 353716.71875 0.2803203947520273 -6 0.2236824035644531 2 Unmodified _IFEKPNTKL_ ENSG00000132275|ENST00000254605|RRP8;ENST00000526352.5_1_11:6621466-6622302:-|nuORF 10.823927491677226 0.5436922275383211 5 AEEK{I|L} 5 -1 21.649 0.0 0.0 1.9887 0.0 0.0 500.3085499494157 0.0 500.3085499494157 0.0 10.0552339309072 0.0 0.0 0 0.0579021467263781 0.0 0.4247425010840047 0.0 AEEK{I|L} 1.9887 - 35 1 2.185 48770.5 1.0 3652 4316 7968 SUDHL4_400M_050219_1,7970 SUDHL4_400M_050219_1,7970,IFEKPNTKL False False FLEEANRVL 42.342687 545.317065417767 1042598.25 7968.0 ENSG00000132275|ENST00000254605|RRP8;;ENST00000526352.5_1_11:6621466-6622302:-|nuORF 4.953546047210693 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7971 42.346 197.0 311280.0 25 0 28026.0 + -1 YTFDPVTKV 9 106 534.7801890775135 1067.5458252218268 2 535.2829467654228 MULTI CID FTMS 0 0 0 7968 160934.296875 0.9669550158879504 1 -0.0278472900390625 3 Carbamidomethyl (C) _TYRLLKDC(Carbamidomethyl (C))_ ENSG00000185009|ENST00000355264|AP3M1 8.593279151180031 0.7721714526254883 5 D{M(Oxidation (M))|F}T[SG] 5 -1 22.218 0.0 0.0 2.0813 0.0 0.0 542.3437134429869 0.0 542.3437134429869 0.0 10.536049848239344 0.0 0.0 0 0.0 0.0 0.0 0.0 D{M(Oxidation (M))|F}T[SG] 2.0813 - 165 1 2.185 51616.2 1.0 3653 4316 7968 SUDHL4_400M_050219_1,7971 SUDHL4_400M_050219_1,7971,TYRLLKDC False False YTFDPVTKV 42.346464 535.282946765423 1083044.375 7968.0 ENSG00000185009|ENST00000355264|AP3M1 7.221540927886963 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7972 42.349 113.0 474290.0 25 0 39198.0 3527 CVERFDTF 8 106 508.72794773020775 1015.4413425272156 2 508.7277099490166 MULTI CID FTMS 0 0 0 7968 114321.09375 0.7326958677497253 -3 0.0952033996582031 4 Unmodified _CVERFDTF_ ENSG00000197429|ENST00000396478|IPP;nc|ENSG00000197429|Q9Y573-2|IPP 13.50788311687929 0.7113601687236069 5 {[DS]|[MA]|[CV]|TT}N 3 6 30.7 0.0 0.0 3.0233 0.0 0.0 0.0 696.2986584534137 696.2986584534137 17.204999916446795 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {[DS]|[MA]|[CV]|TT}N 3.0233 - 32 + 1 2.185 46437.1 1.0 3654 4316 7968 SUDHL4_400M_050219_1,7972 SUDHL4_400M_050219_1,7972,CVERFDTF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7973 42.357 442.0 315770.0 25 0 31059.0 -1 0 164 412.79671672467407 823.5788805161482 2 412.7959167361259 MULTI CID FTMS 0 0 0 7968 97241.9921875 0.6291882782599975 -5 0.1818275451660156 5 5 {I|L} 1 -1 5.4846 0.0 0.0 0.66594 0.0 0.0 483.34299292024815 224.12990747623283 707.472900396481 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.66594 - 29 + 1 2.185 109903.5 1.0 3655 4316 7968 SUDHL4_400M_050219_1,7973 SUDHL4_400M_050219_1,7973, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7974 42.363 364.0 176210.0 25 0 22165.0 + 14601 IIDQHTFEV 9 109 551.2822151188585 1100.549877304517 2 551.2812988162041 MULTI CID FTMS 0 0 0 7968 85801.171875 0.1687078028873857 8 -0.6483688354492188 6 Unmodified _IIDQHTFEV_ ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1 16.942295170755138 0.3780752226737986 5 {I|L}{I|L}[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}T 6 6 40.15 0.0 0.0 3.6482 0.0 0.0 0.0 377.12140833072505 377.12140833072505 27.931825014007217 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.0 0.0 {I|L}{I|L}[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}T 3.6482 - 118 + 1 2.185 54352.3 1.0 3656 4316 7968 SUDHL4_400M_050219_1,7974 SUDHL4_400M_050219_1,7974,IIDQHTFEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7976 42.368 66.0 491170.0 25 0 39122.0 1751 ALQRKADSV 9 72 494.283182503884 986.551812074568 2 494.2826721072197 MULTI CID FTMS 0 0 0 7975 680900.3125 0.2783076712578487 13 -0.9842185974121094 1 Unmodified _ALQRKADSV_ ENSG00000050555|ENST00000361069|LAMC3 13.50788311687929 0.4710407108020397 5 V 1 8 11.783 0.0 0.0 1.1943 0.0 0.0 869.4723804723203 0.0 869.4723804723203 0.0 6.29818655252878 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1943 + + 14 + 1 2.185 32732.6 1.0 3657 4317 7975 SUDHL4_400M_050219_1,7976 SUDHL4_400M_050219_1,7976,ALQRKADSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7977 42.382 800.0 274200.0 25 0 14770.0 + 8911 FAHPYQYEL 9 176 584.2769346501219 1166.5393163670435 2 584.2780029177666 MULTI CID FTMS 0 0 0 7975 154485.28125 0.4806228508939426 -2 0.060455322265625 2 Unmodified _FAHPYQYEL_ ENSG00000171824|ENST00000376936|EXOSC10;nc|ENSG00000171824|Q01780-2|EXOSC10 34.10243960390752 0.1078313939113124 5 [YE]WKHYE{I|L} 8 6 + 48.013 0.0 0.0 4.1158 4.1158 76.012 0.0 0.0 0.0 1.1872663948508233 16.40978057358332 1.1872663948508233 1.1872663948508233 0 0.2614393726401688 1.3010299956639813 0.0 0.3494850021680094 [YE]WKHYE{I|L};{[DS]|[MA]|[CV]|TT}RKPC(Carbamidomethyl (C))YE{I|L};{[MS]|[{M(Oxidation (M))|F}A]}HPYQYE{I|L};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}EKHYE{I|L};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}TRHYE{I|L};{[DS]|[MA]|[CV]|TT}[H{I|L}]YQYE{I|L};[YE][YK]WHE{I|L};{[DS]|[MA]|[CV]|TT}RKP[CG]YE{I|L};{[DS]|[MA]|[CV]|TT}[VG]KPC(Carbamidomethyl (C))YE{I|L};[YE]WKYHE{I|L} 4.1158;4.0141;3.6042;3.4066;3.3569;3.3552;3.3302;3.2247;3.2247;3.2247 -;-;+;-;-;-;-;-;-;- + 2662 1 2.185 163023.9 0.550000011920929 3658 4317 7975 SUDHL4_400M_050219_1,7977 SUDHL4_400M_050219_1,7977,FAHPYQYEL True True FAHPYQYEL 42.381752 584.278002917767 1912595.0 7975.0 ENSG00000171824|ENST00000376936|EXOSC10;;nc|ENSG00000171824|Q01780-2|EXOSC10 5.515205065409343 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7978 42.384 129.0 356820.0 25 0 29576.0 + 40978 VLYPHLSTY 9 76 546.7896080665062 1091.5646631998122 2 546.7885009646416 MULTI CID FTMS 0 0 0 7975 172430.703125 0.351348596947604 5 -0.3466300964355469 3 Unmodified _VLYPHLSTY_ ENSG00000162227|ENST00000294168|TAF6L 16.942295170755138 0.3780752226737986 5 [{I|L}T]{I|L}TD 5 6 41.95 0.0 0.0 3.8431 0.0 0.0 0.0 545.2513521783811 545.2513521783811 9.030899869919438 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]{I|L}TD 3.8431 - 79 + 1 2.185 41462.1 1.0 3659 4317 7975 SUDHL4_400M_050219_1,7978 SUDHL4_400M_050219_1,7978,VLYPHLSTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7979 42.392 399.0 220830.0 25 0 25021.0 + 37755 YLDLSNNRL 9 107 553.8301807015122 1105.6458084698245 2 553.8301269412041 MULTI CID FTMS 0 0 0 7975 127182.2734375 0.3245155628750422 -5 0.1692466735839843 4 Unmodified _TLRLSEKFI_ ENSG00000174123|ENST00000308973|TLR10 7.289230182591677 0.6602208344931196 5 [Y{I|L}]D 3 8 19.041 0.0 0.0 1.7222 0.0 0.0 0.0 711.446747761093 711.446747761093 8.55651869704872 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}]D 1.7222 - 166 1 2.185 72890.7 1.0 3660 4317 7975 SUDHL4_400M_050219_1,7979 SUDHL4_400M_050219_1,7979,TLRLSEKFI False False YLDLSNNRL 42.391537 553.830126941204 484055.5 7975.0 ENSG00000174123|ENST00000308973|TLR10 3.643988609313965 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7981 42.396 8.8 4296300.0 25 0 643720.0 + 1951 AMNPTNTVF 9 64 497.7367441904725 993.458935447745 2 497.7370178103447 MULTI CID FTMS 0 0 0 7980 6263723.0 1.0 0 0.0 1 Unmodified _AMNPTNTVF_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000443628.2_1_X:114011085-114011187:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 23.1484247019978 0.2366544122328345 5 {[QS]|[NT]}PTNAMV{M(Oxidation (M))|F} 9 4 + 40.982 0.0 0.0 4.1252 4.1252 79.224 0.0 0.0 0.0 3.749387366082992 5.192183891903852 3.749387366082992 3.749387366082992 0 0.7870156338638594 0.0 2.055462187404089 0.6747425010840047 {[QS]|[NT]}PTNAMV{M(Oxidation (M))|F};[NP]TTNAMV{M(Oxidation (M))|F};{[QS]|[NT]}PNTAMV{M(Oxidation (M))|F};{[QS]|[NT]}PTGGAMV{M(Oxidation (M))|F};[NP]TNTAMV{M(Oxidation (M))|F};[NP]TTGGAMV{M(Oxidation (M))|F};{[QS]|[NT]}PGGTAMV{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TN[YG]V{M(Oxidation (M))|F};[NP]TGGTAMV{M(Oxidation (M))|F};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TGG[YG]V{M(Oxidation (M))|F} 4.1252;3.7478;3.3189;3.1983;2.9415;2.8209;2.392;2.3504;2.0146;1.0663 -;-;-;-;-;-;-;-;-;- 171 1 2.174 35810.1 1.0 3661 4318 7980 SUDHL4_400M_050219_1,7981 SUDHL4_400M_050219_1,7981,AMNPTNTVF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7982 42.399 116.0 350930.0 25 0 23216.0 -1 TLPRLCAL 8 83 472.27437761770506 942.53420230221 2 472.2701599001884 MULTI CID FTMS 0 0 0 7980 267052.28125 0.1312376351479937 14 -1.0159149169921875 2 Carbamidomethyl (C) _TLPRLC(Carbamidomethyl (C))AL_ ENSG00000167914|ENST00000301659|GSDMA 5.230669730166228 0.792582437072536 5 M 1 -1 13.099 0.0 0.0 1.3898 0.0 0.0 793.4824882902946 0.0 793.4824882902946 0.0 1.3162071738729075 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.3898 - 25 + 1 2.174 37353.7 1.0 3662 4318 7980 SUDHL4_400M_050219_1,7982 SUDHL4_400M_050219_1,7982,TLPRLCAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7983 42.401 119.0 524500.0 25 0 43162.0 + 40675 VLFEHAVGY 9 94 517.7684538633999 1033.5223547935998 2 517.7690917849541 MULTI CID FTMS 0 0 0 7980 288602.65625 0.5414287814775279 -2 0.0560340881347656 3 Unmodified _VLFEHAVGY_ ENSG00000101361|ENST00000329276|NOP56;ENST00000470143.1_1_20:2633306-2634188:+|nuORF;ENST00000494697.5_1_20:2633306-2634895:+|nuORF 24.67388899826682 0.2172451872415813 5 [{I|L}V][HT]V{M(Oxidation (M))|F}VGY 9 4 + 45.792 0.0 0.0 4.4307 4.4307 76.742 0.0 0.0 0.0 24.40999983289359 9.62144052772942 9.62144052772942 0.9247782126794846 0 0.7429928190999391 2.0 0.0 0.0 [{I|L}V][HT]V{M(Oxidation (M))|F}VGY;[{I|L}V][HT]VA[MT]Y;[{I|L}V][HT]V{M(Oxidation (M))|F}GVY;[{I|L}V][HS]{I|L}{M(Oxidation (M))|F}VGY;[{I|L}V][HS]{I|L}A[MT]Y;[{I|L}V][HS]{I|L}{M(Oxidation (M))|F}GVY;[{I|L}V][HT]{M(Oxidation (M))|F}RVY;[{I|L}V][{M(Oxidation (M))|F}E][HQ]VY;[HA]E{M(Oxidation (M))|F}V{I|L}[YR];[HA]VE{M(Oxidation (M))|F}{I|L}[YR] 4.4307;4.3412;4.1394;3.9691;3.8796;3.6778;3.3972;2.8406;2.0408;1.9199 -;-;-;-;-;-;-;-;-;- 224 + 1 2.174 51596.3 1.0 3663 4318 7980 SUDHL4_400M_050219_1,7983 SUDHL4_400M_050219_1,7983,VLFEHAVGY False True VLFEHAVGY 42.401001 517.769091784954 2811736.25 7980.0 ENST00000494697.5_1_20:2633306-2634895:+|nuORF;;ENST00000470143.1_1_20:2633306-2634188:+|nuORF;;ENSG00000101361|ENST00000329276|NOP56 6.91639502843221 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7984 42.403 112.0 693010.0 25 0 60535.0 + 13471 HLTDITLKV 9 114 520.3110169851037 1038.6074810370071 2 520.3111450076103 MULTI CID FTMS 0 0 0 7980 247505.15625 1.0 0 0.0 4 Unmodified _HLTDITLKV_ ENSG00000065427|ENST00000302445|KARS1;ENST00000565738.1_1_16:75674022-75675473:-|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;nc|ENSG00000065427|Q15046-2|KARS1 65.23502041540118 0.0231836506122253 5 [H{I|L}]{[ES]|[DT]|[{I|L}C]}{I|L}T{I|L}KV 9 0 + 50.002 0.0 0.0 4.8144 4.8144 79.62 0.0 0.0 0.0 2.2454626555970947 5.159681240986444 2.2454626555970947 2.2454626555970947 0 1.3936816738473423 1.3979400086720375 0.8494850021680094 0.0 + + [H{I|L}]{[ES]|[DT]|[{I|L}C]}{I|L}T{I|L}KV;[{I|L}T][HD]{I|L}T{I|L}KV;{[QN]|[E{I|L}]|[KN]}[HS]{I|L}T{I|L}KV;[{I|L}T]{[ES]|[DT]|[{I|L}C]}[H{I|L}]{I|L}KV;{[QN]|[E{I|L}]|[KN]}{[MG]|[TS]}[H{I|L}]{I|L}KV;[K{I|L}][Y{M(Oxidation (M))|F}]E{I|L}KV;[NP]V[Q{I|L}]E{I|L}KV 4.8144;4.5982;4.3846;2.5546;2.341;0.83413;0.80948 +;-;-;-;-;-;- + 196 1 2.174 65905.7 1.0 3664 4318 7980 SUDHL4_400M_050219_1,7984 SUDHL4_400M_050219_1,7984,HLTDITLKV True True HLTDITLKV 42.40337 520.31114500761 1724943.375 7980.0 nc|ENSG00000065427|Q15046-2|KARS1;;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;;ENST00000565738.1_1_16:75674022-75675473:-|nuORF;;ENSG00000065427|ENST00000302445|KARS1 4.128608306248983 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7985 42.407 193.0 349840.0 25 0 32042.0 23123 LSPGYWEES 9 81 534.2355274170978 1066.4565019009956 2 534.2364990115166 MULTI CID FTMS 0 0 0 7980 178601.828125 0.6191840098059577 -2 0.0560340881347656 5 Unmodified _LSPGYWEES_ ENST00000397728.7_1_21:47609640-47609970:-|nuORF 15.847184025352805 0.4077185912009129 5 {[TV]|[{I|L}S]}PD{I|L} 5 6 54.08 0.0 0.0 5.071 0.0 0.0 0.0 538.1559025087712 538.1559025087712 42.29756961583624 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}PD{I|L} 5.071 - 100 + 1 2.174 62598.9 1.0 3665 4318 7980 SUDHL4_400M_050219_1,7985 SUDHL4_400M_050219_1,7985,LSPGYWEES False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7986 42.412 247.0 236170.0 25 0 18862.0 + 32813 SEFKGDLETL 10 113 569.7864894519973 1137.5584259707946 2 569.7881957888603 MULTI CID FTMS 0 0 0 7980 146959.046875 0.6700385237035188 -2 0.0560340881347656 6 Unmodified _SEFKGDLETL_ ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 23.78978130925829 0.4341852049148378 5 [QT]HH[VS]SET{I|L} 10 7 [QT]HH[VS]SE + + 23.333 -3.1495 -0.34785 2.0511 2.0511 52.966 0.0 0.0 0.0 0.0 9.520286184402718 0.0 0.0 0 0.4247425010840047 0.0 0.2887254899964357 0.0 [QT]HH[VS]SET{I|L} 2.0511 - 158 + 1 2.174 50433.5 1.0 3666 4318 7980 SUDHL4_400M_050219_1,7986 SUDHL4_400M_050219_1,7986,SEFKGDLETL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7987 42.42 498.0 206780.0 25 0 23944.0 + 24115 LYKWIAYY 8 113 560.2949606525833 1118.5753683719663 2 560.2952758669853 MULTI CID FTMS 0 0 0 7980 95763.1796875 0.6712392747101271 1 -0.0705108642578125 7 Unmodified _LYKWIAYY_ REV__ENSG00000108960|ENST00000262065|MMD 20.871210003555333 0.6025813472596342 5 {I|L}{I|L}S{[VA]|[{I|L}G]}YQYY 9 -1 + 33.835 0.0 0.0 3.0248 3.0248 72.386 0.0 0.0 0.0 0.1849178312658566 5.644935065774408 0.1849178312658566 0.1849178312658566 0 0.9247425010840048 1.0969100130080565 0.3494850021680094 0.0 {I|L}{I|L}S{[VA]|[{I|L}G]}YQYY;{[QN]|[E{I|L}]|[KN]}[K{I|L}]YQYY;[K{I|L}]{M(Oxidation (M))|F}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}YY;{[TV]|[{I|L}S]}{I|L}{[VA]|[{I|L}G]}YQYY;{I|L}{I|L}S[{M(Oxidation (M))|F}V][KS]YY;[{I|L}T]V{[VA]|[{I|L}G]}YQYY;{I|L}{I|L}S{[VA]|[{I|L}G]}Y[AG]YY;{[QN]|[E{I|L}]|[KN]}[K{I|L}]Y[AG]YY;{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V][KS]YY;[{I|L}T][R{I|L}]YQYY 3.0248;3.0083;2.7451;2.625;2.3999;2.2425;2.2016;2.1802;2.0002;1.9758 -;-;-;-;-;-;-;-;-;- 462 1 2.174 84007.8 1.0 3667 4318 7980 SUDHL4_400M_050219_1,7987 SUDHL4_400M_050219_1,7987,LYKWIAYY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7988 42.434 800.0 324070.0 25 0 22134.0 -1 0 135 1031.4515182077107 3091.332725223332 3 1031.785937488079 MULTI CID FTMS 0 0 0 7980 157214.90625 0.226708030590425 -2 0.0560340881347656 8 5 TA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YN]SYC(Carbamidomethyl (C))[HT] 11 -1 30.626 0.0 0.0 0.99069 0.0 0.0 1702.724034893057 0.0 1702.724034893057 0.0 -8.302655216022394 -8.302655216022394 0.0 0 0.0 0.0 1.4049471895720984 0.2887254899964357 TA{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YN]SYC(Carbamidomethyl (C))[HT] 0.99069 - 109436 + 1 2.174 166028.1 0.6700000166893005 3668 4318 7980 SUDHL4_400M_050219_1,7988 SUDHL4_400M_050219_1,7988, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7989 42.448 800.0 121350.0 25 0 4811.7 + 43581 YADSSIAEL 9 103 968.4561888036068 967.4489123370068 1 968.4593383669852 MULTI CID FTMS 0 0 0 7980 111871.75 0.7626501071629093 -1 0.0281867980957031 9 Unmodified _YADSSIAEL_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 88.90359156742426 0.0153595091083554 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSS{I|L}AE{I|L} 9 0 + 69.356 0.0 0.0 7.169 7.169 87.408 0.0 0.0 0.0 3.521825181113627 16.478174818886373 3.521825181113627 3.521825181113627 0 0.8243923658886187 0.0 2.1549471895720984 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSS{I|L}AE{I|L};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}SS{I|L}AE{I|L};[VS]TADYAE{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DSS{I|L}EA{I|L};{[DS]|[MA]|[CV]|TT}AYS{I|L}AE{I|L};{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}SS{I|L}EA{I|L};{[TV]|[{I|L}S]}SADYAE{I|L};[VS]TADAYE{I|L};{[TV]|[{I|L}S]}WSYAE{I|L};{[DS]|[MA]|[CV]|TT}A{I|L}SYAE{I|L} 7.169;6.8049;6.2112;6.1417;5.9447;5.7776;5.6488;5.5501;5.4853;5.4198 +;-;-;-;-;-;-;-;-;- + 3581 1 2.174 67951.0 0.6000000238418579 3669 4318 7980 SUDHL4_400M_050219_1,7989 SUDHL4_400M_050219_1,7989,YADSSIAEL True True YADSSIAEL 42.44823 968.459338366985 754259.4375 7980.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 4.432044665018718 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7990 42.462 800.0 143630.0 25 0 15985.0 + + 33796 RSMNGALAF 9 139 483.7442804325854 0 483.7435485720634 PEAK CID FTMS 0 0 0 7980 106031.5859375 1.0 0 0.0 10 Unmodified _SLDETALAF_ nc|ENSG00000106263|P55884-2|EIF3B;ENSG00000106263|ENST00000360876|EIF3B 20.453626601364224 0.1969592619112565 5 A{I|L}A 3 -1 26.198 0.0 0.0 2.7135 0.0 0.0 165.07541380586332 542.2153369840249 707.2907507898883 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 A{I|L}A 2.7135 + + 87 + 1 2.174 95409.9 0.5199999809265137 3670 4318 7980 SUDHL4_400M_050219_1,7990 SUDHL4_400M_050219_1,7990,SLDETALAF False False RSMNGALAF 42.462045 483.743548572063 661203.1875 7980.0 nc|ENSG00000106263|P55884-2|EIF3B;;ENSG00000106263|ENST00000360876|EIF3B 1.694641351699829 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7992 42.467 43.0 1219300.0 25 0 263670.0 38091 TPKKTAGLW 9 74 501.2904933380042 1000.5664337428084 2 501.2906371951103 MULTI CID FTMS 0 0 0 7991 1293895.75 0.4552296654223365 15 -1.014118194580078 1 Unmodified _TPKKTAGLW_ ENST00000314358.9_1_5:137721996-137722053:+|nuORF 1.844237919475145 0.850302753031785 5 Y 1 9 4.6041 0.0 0.0 0.46015 0.0 0.0 639.4112956586273 195.06698023013908 834.4782758887663 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.46015 - 2 + 1 2.166 45890.5 1.0 3671 4319 7991 SUDHL4_400M_050219_1,7992 SUDHL4_400M_050219_1,7992,TPKKTAGLW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 7993 42.469 110.0 451810.0 25 0 43405.0 + 8683 EVISKLYAV 9 85 511.2998448698181 1020.5851368064364 2 511.2998840212822 MULTI CID FTMS 0 0 0 7991 417823.65625 0.6558393602396551 1 -0.0605812072753906 2 Unmodified _EVISKLYAV_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 25.399314129420983 0.2080152500878129 5 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[HT]{I|L}{I|L}SG 9 5 45.028 0.0 0.0 4.4119 0.0 0.0 0.0 68.05142389468983 68.05142389468983 29.454321750294667 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.805462187404089 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[HT]{I|L}{I|L}SG 4.4119 - 197 + 1 2.166 44610.9 1.0 3672 4319 7991 SUDHL4_400M_050219_1,7993 SUDHL4_400M_050219_1,7993,EVISKLYAV False True EVISKLYAV 42.469226 511.299884021282 4079771.0 7991.0 nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 6.105355739593506 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7994 42.471 78.0 903830.0 25 0 195730.0 + 20086 LIYACLLF 8 83 478.2699254430515 954.525297952903 2 478.2695190310478 MULTI CID FTMS 0 0 0 7991 526249.0625 0.1560412920835033 15 -1.014118194580078 3 Unmodified _LIYACLLF_ REV__ENSG00000137872|ENST00000536845|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-2|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-3|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-4|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-5|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-6|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-7|SEMA6D;REV__nc|ENSG00000137872|Q8NFY4-8|SEMA6D 2.889219685676258 0.8067950007271085 5 {I|L} 1 -1 9.1487 0.0 0.0 0.95845 0.0 0.0 823.4303557915733 0.0 823.4303557915733 0.0 7.158991379665025 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.95845 + + 7 + 1 2.166 59023.8 1.0 3673 4319 7991 SUDHL4_400M_050219_1,7994 SUDHL4_400M_050219_1,7994,LIYACLLF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7995 42.473 111.0 592050.0 25 0 75345.0 + 11334 GFDAIKVRI 9 101 509.8038158528666 1017.5930787725332 2 509.8041869997978 MULTI CID FTMS 0 0 0 7991 521354.34375 0.5243459009731458 12 -0.92034912109375 4 Unmodified _GFDAIKVRI_ REV__ENSG00000177169|ENST00000321867|ULK1 8.593279151180031 0.6146971463335029 5 W 1 -1 13.979 0.0 0.0 1.3738 0.0 0.0 813.5026989891333 0.0 813.5026989891333 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.3738 - 22 + 1 2.166 57183.9 1.0 3674 4319 7991 SUDHL4_400M_050219_1,7995 SUDHL4_400M_050219_1,7995,GFDAIKVRI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 7996 42.476 158.0 419790.0 25 0 58759.0 38729 TTYLISLT 8 103 456.2566733366788 910.4987937401576 2 456.2565795779228 MULTI CID FTMS 0 0 0 7991 358001.40625 0.3506651623059694 7 -0.6424064636230469 5 Unmodified _TTYLISLT_ ENSG00000135439|ENST00000547588|AGAP2;nc|ENSG00000135439|Q99490|AGAP2 5.230669730166228 0.792582437072536 5 {I|L} 1 7 11.109 0.0 0.0 1.2201 0.0 0.0 779.4035464030468 0.0 779.4035464030468 0.0 1.901056208558032 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2201 + + 35 + 1 2.166 54702.1 1.0 3675 4319 7991 SUDHL4_400M_050219_1,7996 SUDHL4_400M_050219_1,7996,TTYLISLT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7997 42.49 800.0 185460.0 25 0 20352.0 + 44185 YLFEPHSGEEY 11 130 685.7987803870321 1369.5830078408642 2 685.7994262576103 MULTI CID FTMS 0 0 0 7991 81264.4453125 0.1677624283088256 -3 0.1265449523925781 6 Unmodified _YLFEPHSGEEY_ ENSG00000096063|ENST00000373825|SRPK1;nc|ENSG00000096063|Q96SB4-3|SRPK1;nc|ENSG00000096063|Q96SB4-4|SRPK1 62.57269311338072 0.058704053366003 5 Y{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}EYYY 9 7 + 91.486 0.0 0.0 6.6798 6.6798 87.812 0.0 0.0 0.0 63.13583964640328 13.199849938126889 13.199849938126889 4.815534464597704 0 1.1382104921644451 2.0 1.9291746928241125 0.0 Y{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}EYYY;Y{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}YEYYY;Y{I|L}{M(Oxidation (M))|F}E[Y{M(Oxidation (M))|F}]YYY;Y{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}E{[DA]|[EG]}[R{M(Oxidation (M))|F}];Y{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}YE{[DA]|[EG]}[R{M(Oxidation (M))|F}];Y{I|L}{M(Oxidation (M))|F}EPH{[{M(Oxidation (M))|F}D]|MM}[R{M(Oxidation (M))|F}];Y{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}[WE][R{M(Oxidation (M))|F}];[Y{I|L}]{[QC]|[C(Carbamidomethyl (C))A]}E{M(Oxidation (M))|F}YE{I|L}Y;Y{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}N[NS][R{M(Oxidation (M))|F}];[Y{I|L}]{[QC]|[C(Carbamidomethyl (C))A]}E{M(Oxidation (M))|F}EY{I|L}Y 6.6798;6.3282;5.492;5.4751;5.1235;5.0999;5.043;5.0026;4.8605;4.83 -;-;-;-;-;-;-;-;-;- 3030 + 1 2.166 109213.7 0.5600000023841858 3676 4319 7991 SUDHL4_400M_050219_1,7997 SUDHL4_400M_050219_1,7997,YLFEPHSGEEY True True YLFEPHSGEEY 42.490289 685.79942625761 3945893.5 7991.0 nc|ENSG00000096063|Q96SB4-3|SRPK1;;ENSG00000096063|ENST00000373825|SRPK1;;nc|ENSG00000096063|Q96SB4-4|SRPK1 8.006484190622965 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 7998 42.492 98.0 1112500.0 25 0 188590.0 -1 0 78 867.4070624541464 1732.7995719750927 2 867.9027587771416 MULTI CID FTMS 0 0 0 7991 403563.25 0.0679260814123448 16 -1.0366783142089844 7 5 [NP]{I|L}NKA[EP]NAD{I|L}D[WH] 15 -1 + 46.798 0.0 0.0 2.7007 2.7007 80.253 0.0 0.0 0.0 6.856982487798732 7.821742761719861 6.856982487798732 9.030899869919438 0 0.0 1.154901959985743 0.0 0.0 [NP]{I|L}NKA[EP]NAD{I|L}D[WH];[NP]{I|L}GGKA[EP]NAD{I|L}D[WH];[NP]{I|L}NKA[EP]GGAD{I|L}D[WH];[NP]{I|L}DVV[EP]NAD{I|L}D[WH];[QA]PAAKA[EP]NAD{I|L}D[WH];[NP][VG]AKA[EP]NAD{I|L}D[WH];[PA]QAAKA[EP]NAD{I|L}D[WH];[NP]{I|L}DVV[EP]NW{I|L}D[WH];[PA]{I|L}TSPA[EP]NAD{I|L}D[WH];[QA]PAAKA[EP]GGAD{I|L}D[WH] 2.7007;2.1796;2.1796;1.9366;1.9164;1.9042;1.6411;1.5505;1.5131;1.3962 -;-;-;-;-;-;-;-;-;- 809 1 2.166 77639.6 1.0 3677 4319 7991 SUDHL4_400M_050219_1,7998 SUDHL4_400M_050219_1,7998, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 7999 42.497 248.0 383470.0 25 0 116850.0 + 33677 SIYAYFVA 8 82 467.2414546736264 932.4683564140528 2 467.2418701052666 MULTI CID FTMS 0 0 0 7991 180065.6875 0.2297492499988038 -3 0.1265449523925781 8 Unmodified _SIYAYFVA_ REV__ENSG00000256574|ENST00000553795|OR13A1 6.354104778181461 0.7857632046190106 5 A 1 -1 13.099 0.0 0.0 1.4048 0.0 0.0 843.4199688181529 0.0 843.4199688181529 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.4048 + + 21 + 1 2.166 81790.8 1.0 3678 4319 7991 SUDHL4_400M_050219_1,7999 SUDHL4_400M_050219_1,7999,SIYAYFVA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8000 42.509 687.0 219930.0 25 0 16798.0 + 18824 LARWAQAL 8 166 464.7701311017306 927.5257092702614 2 464.7697326540947 MULTI CID FTMS 0 0 0 7991 144811.53125 0.3585087760966968 12 -0.92034912109375 9 Unmodified _LARWAQAL_ REV__nc|ENSG00000140254|Q1HG43-2|DUOXA1 11.114462752807354 0.7467182956244686 5 {I|L} 1 -1 11.594 0.0 0.0 1.25 0.0 0.0 796.4307060737755 0.0 796.4307060737755 0.0 -3.098943791441968 -3.098943791441968 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.25 + + 135 + 1 2.166 118001.6 1.0 3679 4319 7991 SUDHL4_400M_050219_1,8000 SUDHL4_400M_050219_1,8000,LARWAQAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8001 42.523 800.0 168660.0 25 0 10306.0 + 9631 FLMKNSDLY 9 161 565.7813657040822 0 565.7816650271416 PEAK CID FTMS 0 0 0 7991 91079.78125 0.8767442441109999 1 -0.0605812072753906 10 Unmodified _FLMKNSDLY_ ENSG00000171241|ENST00000303383|SHCBP1 36.12702656103203 0.0807574182900477 5 {I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}CD 6 6 17.51 0.0 0.0 1.5502 0.0 0.0 181.07474205093928 290.15094934635005 471.2256913972893 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.3252574989159953 0.3807196863200844 {I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}CD 1.5502 - 440 + 1 2.166 105364.7 0.5699999928474426 3680 4319 7991 SUDHL4_400M_050219_1,8001 SUDHL4_400M_050219_1,8001,FLMKNSDLY True True FLMKNSDLY 42.522822 565.781665027142 734465.3125 7991.0 ENSG00000171241|ENST00000303383|SHCBP1 3.5725146929423013 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8003 42.527 35.0 1977700.0 25 0 267390.0 + 16195 IVIDPKNPL 9 82 504.8080128678075 1007.6014728024152 2 504.8081848025322 MULTI CID FTMS 0 0 0 8002 1999520.75 0.8686239935393638 2 -0.1873512268066406 1 Unmodified _IVIDPKNPL_ ENSG00000004897|ENST00000066544|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 49.93300154707207 0.0405168250806675 5 [{I|L}V]{I|L}DPKN[{I|L}P] 9 0 + 67.207 0.0 0.0 6.67 6.67 93.066 0.0 0.0 0.0 37.08318012760535 4.137342758552691 4.137342758552691 10.531314311343166 0 0.8494850021680094 2.0 0.0 1.0629529932484498 + + [{I|L}V]{I|L}DPKN[{I|L}P];[{I|L}V]{I|L}DPK[QP]V;[{I|L}V]{I|L}DPKGG[{I|L}P];[{I|L}V]{I|L}[QT][QP][{I|L}P];[KP]ND{I|L}[{I|L}V][{I|L}P];[KP]DN{I|L}[{I|L}V][{I|L}P];{NN|[MP]|[D{I|L}]|[EV]}PKN[{I|L}V][{I|L}P];[KP]D{I|L}N[{I|L}V][{I|L}P];[KP]GGD{I|L}[{I|L}V][{I|L}P];{NN|[MP]|[D{I|L}]|[EV]}PKP[KT][{I|L}P] 6.67;5.6248;5.4695;2.9642;2.5161;2.0426;1.7792;1.7438;1.6022;1.1577 +;-;-;-;-;-;-;-;-;- + 250 + 1 2.166 56577.2 1.0 3681 4320 8002 SUDHL4_400M_050219_1,8003 SUDHL4_400M_050219_1,8003,IVIDPKNPL True True IVIDPKNPL 42.527196 504.808184802532 19538176.0 8002.0 ENSG00000004897|ENST00000066544|CDC27;;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;;nc|ENSG00000004897|P30260-2|CDC27 4.976508140563965 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8004 42.531 179.0 289760.0 25 0 10950.0 + 29865 QQVPVNQVF 9 92 529.7850722488258 1057.5555915644516 2 529.7850219607353 MULTI CID FTMS 0 0 0 8002 280625.84375 0.3567399170427255 5 -0.5168342590332031 2 Unmodified _QQVPVNQVF_ ENSG00000100316|ENST00000216146|RPL3;ENST00000474162.1_1_5:60686735-60687614:-|nuORF;ENST00000481985.5_1_22:39710087-39711482:-|nuORF 67.34385681178166 0.0221257235307089 5 {[QN]|[E{I|L}]|[KN]}{I|L}PVNQV{M(Oxidation (M))|F} 9 2 + 66.947 0.0 0.0 6.3304 6.3304 86.501 0.0 0.0 0.0 4.669081132677704 8.824995917031941 4.669081132677704 4.669081132677704 0 0.5924778212679485 0.0 1.086696871556164 1.7302046884880935 {[QN]|[E{I|L}]|[KN]}{I|L}PVNQV{M(Oxidation (M))|F};[AG]N{I|L}PVNQV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}PVN[AG]V{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}PVGGQV{M(Oxidation (M))|F};[AG]QVPVNQV{M(Oxidation (M))|F};[AG]N{I|L}PVN[AG]V{M(Oxidation (M))|F};[AG]N{I|L}PVGGQV{M(Oxidation (M))|F};QQVPVNQV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}PVGG[AG]V{M(Oxidation (M))|F};[VP]NQ{I|L}NQV{M(Oxidation (M))|F} 6.3304;5.8889;5.4597;5.4597;5.1838;5.0223;5.0223;4.5978;4.5931;4.5816 -;-;-;-;-;-;-;+;-;- + 604 1 2.166 47371.9 1.0 3682 4320 8002 SUDHL4_400M_050219_1,8004 SUDHL4_400M_050219_1,8004,QQVPVNQVF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8005 42.532 41.0 1089200.0 25 0 177060.0 + 9222 FGIDRPAEL 9 60 509.2720433954219 1016.529533857644 2 509.2722961306572 MULTI CID FTMS 0 0 0 8002 1122514.125 0.7802998659864878 -1 0.0605812072753906 3 Unmodified _FGIDRPAEL_ ENSG00000105705|ENST00000247001|SUGP1;ENST00000588731.6_1_19:19387459-19414804:-|nuORF;ENST00000589144.5_1_19:19387459-19413207:-|nuORF;ENST00000592188.1_1_19:19387459-19391209:-|nuORF 40.23920728925047 0.0741434193262949 5 D{I|L}GE 4 7 41.186 0.0 0.0 4.0516 0.0 0.0 584.3290945744542 0.0 584.3290945744542 0.0 11.933115814076343 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 D{I|L}GE 4.0516 - 26 1 2.166 38475.4 1.0 3683 4320 8002 SUDHL4_400M_050219_1,8005 SUDHL4_400M_050219_1,8005,FGIDRPAEL True True FGIDRPAEL 42.531863 509.272296130657 48932848.0 8002.0 ENSG00000105705|ENST00000247001|SUGP1;;ENST00000588731.6_1_19:19387459-19414804:-|nuORF;;ENST00000589144.5_1_19:19387459-19413207:-|nuORF;;ENST00000592188.1_1_19:19387459-19391209:-|nuORF 6.243719100952148 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8006 42.534 87.0 543250.0 25 0 60626.0 + + 11640 TIPEAFRGV 9 65 495.273742089518 988.532931245836 2 495.2735778689384 MULTI CID FTMS 0 0 0 8002 468537.0 0.6316582931086012 -2 0.1310920715332031 4 Unmodified _GLAPTHTPPV_ ENSG00000213719|ENST00000375784|CLIC1 20.453626601364224 0.5043500229302764 5 [{I|L}T]PEAV 6 -1 43.416 0.0 0.0 4.392 0.0 0.0 0.0 375.1750582330688 375.1750582330688 31.63363846147844 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}T]PEAV 4.392 - 46 + 1 2.166 40747.3 1.0 3684 4320 8002 SUDHL4_400M_050219_1,8006 SUDHL4_400M_050219_1,8006,GLAPTHTPPV False False TIPEAFRGV 42.533788 495.273577868938 5878717.0 8002.0 ENSG00000213719|ENST00000375784|CLIC1 4.924581527709961 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8007 42.54 345.0 403070.0 25 0 58233.0 + 42648 VTVPPAAL 8 145 384.2354781669175 766.4564034006349 2 384.2367126345634 MULTI CID FTMS 0 0 0 8002 248872.25 0.0206973007011919 16 -0.9860992431640624 5 Unmodified _VTVPPAAL_ REV__ENSG00000106078|ENST00000265136|COBL;REV__ENST00000462395.1_1_7:51085250-51098638:-|nuORF;REV__nc|ENSG00000106078|O75128-2|COBL;REV__nc|ENSG00000106078|O75128-3|COBL;REV__nc|ENSG00000106078|O75128-6|COBL;REV__nc|ENSG00000106078|O75128-7|COBL 0.7936320650641473 0.8195151834710337 5 M 1 -1 8.7724 0.0 0.0 1.1445 0.0 0.0 617.4049945645006 0.0 617.4049945645006 0.0 1.2432096310214646 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.1445 - 8 + 1 2.166 112288.1 1.0 3685 4320 8002 SUDHL4_400M_050219_1,8007 SUDHL4_400M_050219_1,8007,VTVPPAAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8008 42.548 438.0 265470.0 25 0 10638.0 -1 0 120 873.9156162210019 1745.8166795088036 2 873.9210082888603 MULTI CID FTMS 0 0 0 8002 221486.71875 0.037987697379575 15 -0.9760971069335938 6 5 [MN]PN{I|L}NEAQRGD{M(Oxidation (M))|F}{I|L}Q 15 -1 + 104.04 0.0 0.0 5.9592 5.9592 86.66 0.0 0.0 0.0 24.607308385314923 15.234615020224725 15.234615020224725 6.020599913279625 0 1.559894379144197 1.6989700043360187 0.0 1.3065533887547016 [MN]PN{I|L}NEAQRGD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}DQAQRGD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NEA[AG]RGD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}GGEAQRGD{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}NEAQRGD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}NEAQ[VG]GD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}DQAQ[VG]GD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}D[AG]AQRGD{M(Oxidation (M))|F}{I|L}Q;[MN]PN{I|L}DQA[AG]RGD{M(Oxidation (M))|F}{I|L}Q;[MN]PGG{I|L}DQAQRGD{M(Oxidation (M))|F}{I|L}Q 5.9592;5.6143;5.4419;5.4419;5.4419;5.4419;5.097;5.097;5.097;5.097 -;-;-;-;-;-;-;-;-;- 5082 + 1 2.166 81585.1 1.0 3686 4320 8002 SUDHL4_400M_050219_1,8008 SUDHL4_400M_050219_1,8008, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8009 42.552 218.0 234790.0 25 0 33609.0 + 22916 LSDPVHLTV 9 96 490.774809962182 979.535066991164 2 490.7752258181572 MULTI CID FTMS 0 0 0 8002 220524.390625 1.0 0 0.0 7 Unmodified _LSDPVHLTV_ ENSG00000072694|ENST00000358671|FCGR2B;ENSG00000143226|ENST00000271450|FCGR2A;ENST00000465075.6_1_1:161559398-161559893:+|nuORF;ENST00000467654.1_1_1:161475257-161480016:+|nuORF;ENST00000473530.6_1_1:161559398-161565518:+|nuORF;ENST00000480308.5_1_1:161633004-161643868:+|nuORF;ENST00000485778.1_1_1:161633004-161641486:+|nuORF;nc|ENSG00000072694|P31994-2|FCGR2B;nc|ENSG00000072694|P31994-3|FCGR2B;nc|ENSG00000072694|P31994-4|FCGR2B;nc|ENSG00000072694|P31994-5|FCGR2B;nc|ENSG00000143226|P12318-2|FCGR2A;nc|ENSG00000244682|P31995-2|FCGR2C;nc|ENSG00000244682|P31995-3|FCGR2C;nc|ENSG00000244682|P31995-4|FCGR2C;nc|ENSG00000244682|P31995|FCGR2C 25.399314129420983 0.2080152500878129 5 {[TV]|[{I|L}S]}DPV{I|L}HS{I|L} 9 4 + 54.566 0.0 0.0 5.5706 5.5706 79.901 0.0 0.0 0.0 23.113744833832754 0.6694678963061307 0.6694678963061307 0.6694678963061307 0 0.4247425010840047 2.0 0.75 0.0 {[TV]|[{I|L}S]}DPV{I|L}HS{I|L};{[TV]|[{I|L}S]}DPV{I|L}HTV 5.5706;5.5023 -;- 123 + 1 2.166 45500.6 1.0 3687 4320 8002 SUDHL4_400M_050219_1,8009 SUDHL4_400M_050219_1,8009,LSDPVHLTV False True LSDPVHLTV 42.55194 490.775225818157 1232937.75 8002.0 nc|ENSG00000072694|P31994-3|FCGR2B;;ENSG00000143226|ENST00000271450|FCGR2A;;ENST00000480308.5_1_1:161633004-161643868:+|nuORF;;nc|ENSG00000244682|P31995-3|FCGR2C;;nc|ENSG00000072694|P31994-5|FCGR2B;;ENST00000485778.1_1_1:161633004-161641486:+|nuORF;;nc|ENSG00000244682|P31995|FCGR2C;;nc|ENSG00000244682|P31995-2|FCGR2C;;nc|ENSG00000244682|P31995-4|FCGR2C;;nc|ENSG00000143226|P12318-2|FCGR2A;;nc|ENSG00000072694|P31994-4|FCGR2B;;nc|ENSG00000072694|P31994-2|FCGR2B;;ENST00000473530.6_1_1:161559398-161565518:+|nuORF;;ENST00000467654.1_1_1:161475257-161480016:+|nuORF;;ENST00000465075.6_1_1:161559398-161559893:+|nuORF;;ENSG00000072694|ENST00000358671|FCGR2B 2.428837696711222 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8010 42.566 800.0 249800.0 25 0 8171.0 -1 0 171 901.4175189622986 1800.820484991397 2 901.9173461794852 MULTI CID FTMS 0 0 0 8002 246089.53125 0.3722802511372352 6 -0.5818252563476562 8 5 [NP]{I|L}DM{I|L}T{M(Oxidation (M))|F}DAN{I|L}DP[EP] 16 -1 + 97.073 0.0 0.0 5.3905 5.3905 87.012 0.0 0.0 0.0 11.760912590556828 7.659167939666347 7.659167939666347 9.01390202114051 0 0.2887254899964357 0.9208187539523752 1.6184151806525389 1.0356668758921828 [NP]{I|L}DM{I|L}T{M(Oxidation (M))|F}DAN{I|L}DP[EP];[NP]{I|L}DM{I|L}T{M(Oxidation (M))|F}DAGG{I|L}DP[EP];[NP]{I|L}D[HV]QQDAN{I|L}DP[EP];[NP]{I|L}D[HV]QGADAN{I|L}DP[EP];{[QV]|[N{I|L}]|[RA]|[KV]}PDM{I|L}T{M(Oxidation (M))|F}DAN{I|L}DP[EP];[NP]{I|L}NAHG{NN|[MP]|[D{I|L}]|[EV]}DAN{I|L}DP[EP];[NP]{I|L}NM[KS]{M(Oxidation (M))|F}DY{I|L}HP[EP];[YQ]HAA{I|L}T{M(Oxidation (M))|F}DAN{I|L}DP[EP];[NP]{I|L}NA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}DAN{I|L}DP[EP];{[CP]|[EA]}EVTVR{M(Oxidation (M))|F}DAN{I|L}DP[EP] 5.3905;4.8899;4.886;4.758;4.7374;4.7296;4.6845;4.6292;4.591;4.5869 -;-;-;-;-;-;-;-;-;- 140902 1 2.166 130106.8 0.8799999952316284 3688 4320 8002 SUDHL4_400M_050219_1,8010 SUDHL4_400M_050219_1,8010, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8011 42.571 271.0 295090.0 25 0 37040.0 + 20396 LLGSIVLEE 9 117 486.7827009676734 971.5508490021468 2 486.7838928103447 MULTI CID FTMS 0 0 0 -1 0 9 Unmodified _LLGSIVLEE_ REV__ENSG00000278685|ENST00000615129|IQCA1L 8.593279151180031 0.6146971463335029 5 {I|L} 1 -1 11.42 0.0 0.0 1.1754 0.0 0.0 840.4555711474578 0.0 840.4555711474578 0.0 0.1609234168570061 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1754 + + 58 + 1 2.166 64074.4 1.0 3689 4320 8002 SUDHL4_400M_050219_1,8011 SUDHL4_400M_050219_1,8011,LLGSIVLEE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8012 42.575 236.0 271430.0 25 0 27466.0 + 5339 DLGQLTYML 9 104 527.2657171529163 1052.5168813726325 2 527.2654296755791 MULTI CID FTMS 0 0 0 8002 144037.46875 1.0 0 0.0 10 Unmodified _DLGQLTYML_ ENSG00000139364|ENST00000682704|TMEM132B;nc|ENSG00000139364|Q14DG7-3|TMEM132B;nc|ENSG00000139364|Q14DG7|TMEM132B 32.30548876998284 0.1201446275138228 5 {[TV]|[{I|L}S]}{[QG]|[NA]}E[Y{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 9 3 + 23.675 0.0 0.0 2.2493 2.2493 76.575 0.0 0.0 0.0 4.458865705675876 0.5023491188713827 0.5023491188713827 4.458865705675876 0 0.0 2.0 0.2302046884880938 0.0 {[TV]|[{I|L}S]}{[QG]|[NA]}E[Y{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[CP]|[EA]}{I|L}{[NV]|[RG]}[YT]M{I|L};[Y{I|L}][H{I|L}][YT]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[CP]|[EA]}{I|L}DVR[HD]V;{[CP]|[EA]}{I|L}[DP][HQ]M{I|L};{[CP]|[EA]}{I|L}{[NV]|[RG]}[YT]P{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}[DP][HQ]P{M(Oxidation (M))|F};{[CP]|[EA]}{I|L}[QP]E[NG]PV;{[VA]|[{I|L}G]}{[QS]|[NT]}E[Y{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 2.2493;1.8257;1.5569;1.3853;1.313;1.2713;0.75858;0.20019;0.11029 -;-;-;-;-;-;-;-;- 249 1 2.166 53746.3 1.0 3690 4320 8002 SUDHL4_400M_050219_1,8012 SUDHL4_400M_050219_1,8012,DLGQLTYML True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8014 42.592 800.0 167110.0 25 0 8793.4 + -1 SQVPTQMSF 9 168 512.7416571653569 1023.4687613975136 2 512.7416869997978 MULTI CID FTMS 0 0 0 8013 113232.609375 0.5365479078414438 4 -0.4644927978515625 1 Carbamidomethyl (C) _VTC(Carbamidomethyl (C))PSINSF_ nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;ENSG00000100991|ENST00000252015|TRPC4AP 24.020572477871973 0.2255576514309169 5 VKMS 4 -1 24.621 0.0 0.0 2.4057 0.0 0.0 413.1500490945824 162.05669580631096 575.2067449008933 0.0 0.0 0.0 0.0 0 1.25 0.0 0.6203715150305281 0.0 VKMS 2.4057 - 528 + 1 2.146 103839.5 0.6800000071525574 3691 4321 8013 SUDHL4_400M_050219_1,8014 SUDHL4_400M_050219_1,8014,VTCPSINSF False False SQVPTQMSF 42.592459 512.741686999798 3304947.5 8013.0 nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;;ENSG00000100991|ENST00000252015|TRPC4AP 5.320470968882243 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8015 42.595 112.0 442390.0 25 0 54371.0 + -1 ELSLLLCAL 9 88 516.2961824999164 1030.5778120666328 2 516.2966186404228 MULTI CID FTMS 0 0 0 8013 391982.21875 0.2326575287563208 -2 0.1129226684570312 2 Carbamidomethyl (C) _ELSLLLC(Carbamidomethyl (C))AL_ REV__ENSG00000141452|ENST00000269221|RMC1;REV__ENST00000589215.5_1_18:21087981-21111645:+|nuORF;REV__ENST00000589409.1_1_18:21109949-21110297:+|nuORF;REV__ENST00000591367.5_1_18:21109371-21111665:+|nuORF 7.910154910731844 0.6385446671287552 5 [{I|L}T]D{M(Oxidation (M))|F} 4 -1 28.962 0.0 0.0 2.8103 0.0 0.0 0.0 551.3167396391515 551.3167396391515 12.351409150946786 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T]D{M(Oxidation (M))|F} 2.8103 - 124 1 2.146 44111.3 1.0 3692 4321 8013 SUDHL4_400M_050219_1,8015 SUDHL4_400M_050219_1,8015,ELSLLLCAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8016 42.609 800.0 220500.0 25 0 21850.0 15045 ILYDKDHYK 9 144 597.8110752794904 1193.6075976257807 2 597.8114501833916 MULTI CID FTMS 0 0 0 8013 164193.96875 0.5639611266413155 -1 0.0523414611816406 3 Unmodified _ILYDKDHYK_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4 25.399314129420983 0.2080152500878129 5 {I|L}{I|L}YTSQGHY{I|L} 10 5 + 85.71 0.0 0.0 7.1808 7.1808 84.073 0.0 0.0 0.0 36.53212513775344 0.8297423506476349 0.8297423506476349 0.8297423506476349 0 1.2064608101803795 2.0 1.1307196863200843 0.0 {I|L}{I|L}YTSQGHY{I|L};{I|L}{I|L}YTSQGH{I|L}Y;{I|L}{I|L}YTSQG{I|L}HY;{I|L}{I|L}YTSQG{I|L}YH;{I|L}{I|L}YTSQG{[RE]|[WV]}Q;{I|L}{I|L}YTYY{I|L}[{M(Oxidation (M))|F}V];{I|L}{I|L}YT[WR]{[QS]|[NT]}Q;{I|L}{I|L}YT[WR]DD{I|L};{I|L}{I|L}YTYY[VP]Y;{I|L}{I|L}YT[TA]{[NV]|[RG]}HY 7.1808;7.1112;6.7432;6.5904;6.4543;5.5766;5.2477;5.1598;4.688;4.6353 -;-;-;-;-;-;-;-;-;- 1603 + 1 2.146 130356.2 0.8100000023841858 3693 4321 8013 SUDHL4_400M_050219_1,8016 SUDHL4_400M_050219_1,8016,ILYDKDHYK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8017 42.615 348.0 287030.0 25 0 27626.0 + 17020 KKGLGFGF 8 131 427.250790320714 852.4870277082281 2 427.2538635134697 MULTI CID FTMS 0 0 0 8013 161442.28125 0.6076525252648814 -1 0.0523414611816406 4 Unmodified _KKGLGFGF_ REV__ENSG00000178537|ENST00000319017|SLC25A20;REV__ENST00000440964.1_1_3:48895145-48933199:-|nuORF 0.6903765706972694 0.8201419426409876 5 {M(Oxidation (M))|F} 1 -1 9.3323 0.0 0.0 1.0947 0.0 0.0 687.4409441894766 0.0 687.4409441894766 0.0 1.269254589842559 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0947 + + 3 + 1 2.146 80104.0 1.0 3694 4321 8013 SUDHL4_400M_050219_1,8017 SUDHL4_400M_050219_1,8017,KKGLGFGF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8018 42.62 245.0 180820.0 25 0 11853.0 26172 NQDLSWLEL 9 89 559.2823537823509 1116.5501546315018 2 559.2831298708916 MULTI CID FTMS 0 0 0 8013 83943.515625 1.0 0 0.0 5 Unmodified _NQDLSWLEL_ ENSG00000137857|ENST00000389037|DUOX1;nc|ENSG00000137857|Q9NRD9-2|DUOX1 7.910154910731844 0.6385446671287552 5 {I|L} 1 8 13.495 0.0 0.0 1.2086 0.0 0.0 985.45492255318 0.0 985.45492255318 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2086 + + 39 + 1 2.146 38954.2 1.0 3695 4321 8013 SUDHL4_400M_050219_1,8018 SUDHL4_400M_050219_1,8018,NQDLSWLEL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8019 42.633 800.0 117420.0 25 0 8309.8 + 13358 HLFSGHLSTL 10 153 556.2984631266572 1110.5823733201144 2 556.2988159060478 MULTI CID FTMS 0 0 0 8013 94742.3125 1.0 0 0.0 6 Unmodified _HLFSGHLSTL_ ENSG00000242802|ENST00000649063|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;nc|ENSG00000242802|O43299-3|AP5Z1 18.1463463914782 0.5430639438673815 5 [H{I|L}][YQ]H{I|L}V{[DS]|[MA]|[CV]|TT} 9 5 + 34.828 0.0 0.0 3.136 3.136 74.01 0.0 0.0 0.0 10.93749282042581 1.249387366082999 1.249387366082999 1.249387366082999 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [H{I|L}][YQ]H{I|L}V{[DS]|[MA]|[CV]|TT};[H{I|L}]W{[TV]|[{I|L}S]}DD{I|L}{I|L};[H{I|L}][YQ]{I|L}HV{[DS]|[MA]|[CV]|TT};{I|L}{I|L}D{[CP]|[EA]}H{I|L}V{[DS]|[MA]|[CV]|TT};[H{I|L}][KC][RN]D{I|L}{I|L};[{I|L}A]ED{I|L}H{I|L}V{[DS]|[MA]|[CV]|TT};{I|L}{I|L}D{[CP]|[EA]}{I|L}HV{[DS]|[MA]|[CV]|TT};[H{I|L}][KC]{M(Oxidation (M))|F}[HT]{I|L}{I|L};[H{I|L}][YQ]S[HT]{I|L}{I|L};[H{I|L}][YR]{I|L}HC(Carbamidomethyl (C)){I|L} 3.136;3.0235;2.5939;2.1512;1.8773;1.8017;1.6091;1.6062;1.6062;1.5363 -;-;-;-;-;-;-;-;-;- 738 1 2.146 73639.6 0.6299999952316284 3696 4321 8013 SUDHL4_400M_050219_1,8019 SUDHL4_400M_050219_1,8019,HLFSGHLSTL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8020 42.643 544.0 364370.0 25 0 35074.0 + 37935 TMADQIVTV 9 169 489.2520384501585 976.4895239671172 2 489.2526733279228 MULTI CID FTMS 0 0 0 8013 136428.8125 0.1301692731697127 -1 0.0523414611816406 7 Unmodified _TMADQIVTV_ ENSG00000116266|ENST00000370008|STXBP3 61.357469665136826 0.0253304979873734 5 {[TV]|[{I|L}S]}CDQ{I|L} 6 5 42.981 0.0 0.0 4.4016 0.0 0.0 0.0 314.1711938883786 314.1711938883786 24.87881044774285 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.274227503252014 0.2614393726401688 {[TV]|[{I|L}S]}CDQ{I|L} 4.4016 - 1201 1 2.146 153327.1 1.0 3697 4321 8013 SUDHL4_400M_050219_1,8020 SUDHL4_400M_050219_1,8020,TMADQIVTV True True TMADQIVTV 42.642894 489.252673327923 14433099.0 8013.0 ENSG00000116266|ENST00000370008|STXBP3 5.973067283630371 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8021 42.655 613.0 228140.0 25 0 20006.0 + 12975 HAIPPTLAM 9 167 475.7597802154014 949.5050074976028 2 475.7596923708916 MULTI CID FTMS 0 0 0 8013 140710.71875 0.1024407591068275 70 -4.051700592041016 8 Unmodified _HAIPPTLAM_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 5 [TP]P{I|L}HA{I|L}AM 9 6 + 33.748 0.0 0.0 3.5542 3.5542 77.728 0.0 0.0 0.0 3.5660734837991868 8.384767769392742 3.5660734837991868 3.5660734837991868 0 0.7742275032520141 0.4685210829577448 1.3807196863200843 0.0 [TP]P{I|L}HA{I|L}AM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[RE]|[WV]}A{I|L}AM;[{I|L}A]HP[TP]{I|L}AM;[HA]{I|L}P[TP]{I|L}AM;[YG]{I|L}[TP]PR{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]{[QN]|[E{I|L}]|[KN]}A{I|L}AM;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}AM;[YG]{I|L}[TP][R{I|L}]M;[{M(Oxidation (M))|F}T]{I|L}{I|L}[RV]AM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DV][RV]AM 3.5542;3.1787;2.7854;2.3617;2.2943;2.067;2.0234;1.6243;1.5047;1.4787 -;-;-;+;-;-;-;-;-;- + 402 1 2.146 110232.0 1.0 3698 4321 8013 SUDHL4_400M_050219_1,8021 SUDHL4_400M_050219_1,8021,HAIPPTLAM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8022 42.669 800.0 132530.0 25 0 7220.2 -1 0 118 917.9318260220748 1833.8490991109493 2 917.9319335818292 MULTI CID FTMS 0 0 0 8013 135620.265625 0.7432518213944628 -1 0.0523414611816406 9 5 [MN]PD{I|L}NAD[HK]EMN{I|L} 14 -1 89.069 0.0 0.0 4.857 0.0 0.0 0.0 208.0732821100219 208.0732821100219 65.30980112594399 0.0 0.0 0.0 0 0.6549471895720984 1.5228787452803376 0.6861818737241735 1.329689690656103 [MN]PD{I|L}NAD[HK]EMN{I|L} 4.857 - 2275 + 1 2.146 72958.0 0.6499999761581421 3699 4321 8013 SUDHL4_400M_050219_1,8022 SUDHL4_400M_050219_1,8022, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8023 42.674 287.0 285860.0 25 0 17222.0 + 24235 MANGAVIHL 9 112 463.2497247276007 924.4848965220012 2 463.2495910525322 MULTI CID FTMS 0 0 0 8013 134136.703125 1.0 0 0.0 10 Unmodified _MANGAVIHL_ ENSG00000099995|ENST00000215793|SF3A1;nc|ENSG00000099995|Q15459-2|SF3A1 26.34127834903884 0.1960301806784604 5 {[DS]|[MA]|[CV]|TT}NQV{I|L}H{I|L} 8 2 + 34.914 0.0 0.0 3.7766 3.7766 84.315 0.0 0.0 0.0 22.395996733280896 5.951797469533027 5.951797469533027 9.262137858390812 0 0.0 2.0 0.0 0.0 {[DS]|[MA]|[CV]|TT}NQV{I|L}H{I|L};{[DS]|[MA]|[CV]|TT}N[AG]V{I|L}H{I|L};{[DS]|[MA]|[CV]|TT}GGQV{I|L}H{I|L};{[DS]|[MA]|[CV]|TT}GG[AG]V{I|L}H{I|L} 3.7766;2.7747;2.7747;1.7787 -;+;-;- + 190 + 1 2.146 70134.9 1.0 3700 4321 8013 SUDHL4_400M_050219_1,8023 SUDHL4_400M_050219_1,8023,MANGAVIHL False True MANGAVIHL 42.673875 463.249591052532 562106.3125 8013.0 ENSG00000099995|ENST00000215793|SF3A1;;nc|ENSG00000099995|Q15459-2|SF3A1 5.683870951334636 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8024 42.689 800.0 53473.0 25 0 2611.9 -1 0 59 1173.9194657534 7037.4731357208 6 1174.920214831829 MULTI CID FTMS 0 0 0 8013 91026.78125 0.5193711502710072 16 -0.9469146728515624 11 5 Y 1 -1 6.9897 0.0 0.0 0.099321 0.0 0.0 6169.074894609274 702.3223360650999 6871.397230674374 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.099321 - 9 + 1 2.146 33268.1 0.4900000095367431 3701 4321 8013 SUDHL4_400M_050219_1,8024 SUDHL4_400M_050219_1,8024, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8025 42.696 421.0 282320.0 25 0 66950.0 24698 MNIRSKTRK 9 131 567.3298300720465 1132.645107210893 2 567.3292724490166 MULTI CID FTMS 0 0 0 8013 91526.65625 0.0677828556913194 -24 1.4539146423339844 12 Unmodified _MNIRSKTRK_ ENST00000451962.5_1_7:112620172-112626699:-|nuORF 3.5964929083625545 0.7891324200061827 5 {I|L} 1 8 9.8329 0.0 0.0 0.86813 0.0 0.0 1001.5500277204618 0.0 1001.5500277204618 0.0 0.6841897995400359 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.86813 + + 145 + 1 2.146 98730.9 1.0 3702 4321 8013 SUDHL4_400M_050219_1,8025 SUDHL4_400M_050219_1,8025,MNIRSKTRK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8026 42.71 800.0 120240.0 25 0 10614.0 + + -1 VQGIFVEKY 9 138 542.2786277175406 1082.5427025018812 2 541.7969848513603 MULTI CID FTMS 0 0 0 -1 0 13 Oxidation (M) _DIRIM(Oxidation (M))EKY_ nc|ENSG00000254893|A6NIZ1|RAP1BL;nc|ENSG00000127314|P61224-3|RAP1B;ENSG00000127314|ENST00000250559|RAP1B;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-2|RAP1B;ENSG00000116473|ENST00000369709|RAP1A 18.13498045792455 0.6430038125133779 5 CEKY 4 -1 29.131 0.0 0.0 2.691 0.0 0.0 541.3108432262937 0.0 541.3108432262937 0.0 9.650093250860504 0.0 0.0 0 0.3807196863200844 0.0 0.3252574989159953 0.3054621874040891 CEKY 2.691 - 1064 + 1 2.146 79710.6 0.7400000095367432 3703 4321 8013 SUDHL4_400M_050219_1,8026 SUDHL4_400M_050219_1,8026,DIRIMEKY False False VQGIFVEKY 42.710256 541.79698485136 5463014.5 8013.0 nc|ENSG00000254893|A6NIZ1|RAP1BL;;nc|ENSG00000127314|P61224-3|RAP1B;;ENSG00000127314|ENST00000250559|RAP1B;;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;;nc|ENSG00000127314|P61224-2|RAP1B;;ENSG00000116473|ENST00000369709|RAP1A 4.496269226074219 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8028 42.715 53.0 610330.0 25 0 77148.0 + 1952 AMNPTNTVF 9 59 497.7367441904725 993.458935447745 2 497.7369567751884 MULTI CID FTMS 0 0 0 8027 666722.5625 0.1064418976541587 4 -0.3944740295410156 1 Unmodified _AMNPTNTVF_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000443628.2_1_X:114011085-114011187:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 16.942295170755138 0.3780752226737986 5 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TNAT{M(Oxidation (M))|F}{M(Oxidation (M))|F} 8 5 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TNA + + 26.682 17.447 3.0068 2.6858 2.6858 53.661 0.0 0.0 0.0 0.0 5.511525224473814 0.0 0.0 0 0.0 0.0 0.5 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TNAT{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.6858 - 46 + 1 2.123 31459.8 1.0 3704 4322 8027 SUDHL4_400M_050219_1,8028 SUDHL4_400M_050219_1,8028,AMNPTNTVF False True AMNPTNTVF 42.715004 497.736956775188 89463512.0 8027.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;;ENST00000443628.2_1_X:114011085-114011187:-|nuORF 5.921775976816813 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8029 42.716 37.0 1483800.0 25 0 232010.0 21 AAAISTSRVLT 11 83 545.3170279349571 1088.619502936714 2 545.3164550662041 MULTI CID FTMS 0 0 0 8027 1261830.125 1.0 0 0.0 2 Unmodified _AAAISTSRVLT_ ENSG00000198301|ENST00000356260|SDAD1;ENST00000395710.5_1_4:76871905-76902632:-|nuORF;nc|ENSG00000198301|Q9NVU7-2|SDAD1 3.2813086475875832 0.8596665074481906 5 {I|L} 1 10 9.5329 0.0 0.0 0.87569 0.0 0.0 957.5238283535094 0.0 957.5238283535094 0.0 2.5431915308286346 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.87569 + + 16 + 1 2.123 50423.2 1.0 3705 4322 8027 SUDHL4_400M_050219_1,8029 SUDHL4_400M_050219_1,8029,AAAISTSRVLT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8030 42.717 36.0 1532000.0 25 0 327750.0 23814 LVEHRRVH 8 86 523.303409344533 1044.5922657558658 2 523.3041259646416 MULTI CID FTMS 0 0 0 8027 1439096.25 0.4586845383369208 -2 0.1873512268066406 3 Unmodified _LVEHRRVH_ ENSG00000152475|ENST00000597582|ZNF837 2.302733041254933 0.8103549651115762 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.123 48508.9 1.0 3706 4322 8027 SUDHL4_400M_050219_1,8030 SUDHL4_400M_050219_1,8030,LVEHRRVH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8031 42.719 41.0 1145200.0 25 0 237970.0 + 18552 LAAAVNRH 8 73 426.2460556039864 850.4775582747728 2 426.2462341189384 MULTI CID FTMS 0 0 0 8027 1253585.0 0.8397606928041625 -1 0.135009765625 4 Unmodified _LAAAVNRH_ REV__ENST00000436411.5_1_7:107204485-107204728:+|nuORF;REV__ENST00000443233.5_1_7:107204485-107205092:+|nuORF 2.577480529830294 0.808687252328423 5 E 1 -1 9.3323 0.0 0.0 1.0973 0.0 0.0 703.4269734132479 0.0 703.4269734132479 0.0 2.342605414788723 0.0 0.0 0 0.0 0.0 0.0 0.0 E 1.0973 - 2 + 1 2.123 46816.3 1.0 3707 4322 8027 SUDHL4_400M_050219_1,8031 SUDHL4_400M_050219_1,8031,LAAAVNRH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8032 42.721 114.0 723050.0 25 0 115080.0 19807 LGVGRNRP 8 106 434.75982721881184 867.5051015044237 2 434.7592040896416 MULTI CID FTMS 0 0 0 8027 734077.125 0.8971291750906908 -1 0.135009765625 5 Unmodified _LGVGRNRP_ ENST00000357736.8_1_17:79877633-79877984:-|nuORF 0.7936320650641473 0.8195151834710337 5 [R{M(Oxidation (M))|F}]M 3 7 5.973 0.0 0.0 0.68852 0.0 0.0 0.0 430.2672529538956 430.2672529538956 5.259621790487687 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.25 [R{M(Oxidation (M))|F}]M 0.68852 - 5 1 2.123 68688.8 1.0 3708 4322 8027 SUDHL4_400M_050219_1,8032 SUDHL4_400M_050219_1,8032,LGVGRNRP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8033 42.724 145.0 613900.0 25 0 68198.0 + 17221 KLLGELHTL 9 111 512.3132211976218 1022.6118894620436 2 512.3140136599541 MULTI CID FTMS 0 0 0 8027 446426.71875 0.9184650064161016 -1 0.135009765625 6 Unmodified _KLLGELHTL_ ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-3|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1 118.0683919894846 0.0022886718041725 5 K{I|L}{I|L}{[DA]|[EG]}{I|L}HT{I|L} 9 0 + 74.628 0.0 0.0 7.2978 7.2978 96.331 0.0 0.0 0.0 29.55645316481359 0.8712801896759714 0.8712801896759714 27.372366890523324 0 2.853917193908117 0.0 2.4361818737241734 0.0 + + K{I|L}{I|L}{[DA]|[EG]}{I|L}HT{I|L};[K{I|L}]{I|L}{[DA]|[EG]}{I|L}HT{I|L};K{I|L}{I|L}{[DA]|[EG]}T[H{I|L}]{I|L};[H{I|L}]T{I|L}GE{I|L}K{I|L};[{I|L}T]H{I|L}GE{I|L}K{I|L};[HT]{I|L}{I|L}GE{I|L}K{I|L};[H{I|L}]T{I|L}GE{I|L}{I|L}K;[H{I|L}]T{I|L}G{I|L}[VG]T{I|L};[H{I|L}]T{I|L}G{I|L}EK{I|L};[H{I|L}]T[TP]{I|L}KT{I|L} 7.2978;4.6211;3.9917;3.8286;3.4395;3.3621;3.3522;3.295;3.2399;3.2002 +;+;-;-;-;-;-;-;-;- + 994 + 1 2.123 76006.7 1.0 3709 4322 8027 SUDHL4_400M_050219_1,8033 SUDHL4_400M_050219_1,8033,KLLGELHTL True True KLLGELHTL 42.72382 512.314013659954 4508631.0 8027.0 ENSG00000078674|ENST00000325083|PCM1;;nc|ENSG00000078674|Q15154-4|PCM1;;nc|ENSG00000078674|Q15154-5|PCM1;;nc|ENSG00000078674|Q15154-3|PCM1;;nc|ENSG00000078674|Q15154-2|PCM1 5.595381736755371 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8034 42.734 588.0 342160.0 25 0 23589.0 -1 0 121 1031.4515182077107 3091.332725223332 3 1031.786303699017 MULTI CID FTMS 0 0 0 8027 396316.125 0.57149827795021 2 -0.2738914489746094 7 5 QK[{M(Oxidation (M))|F}V]SYD 7 -1 24.83 0.0 0.0 0.80322 0.0 0.0 1922.8165756648043 298.10712593477786 2220.9237015995823 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4291746928241125 0.2614393726401688 QK[{M(Oxidation (M))|F}V]SYD 0.80322 - 40006 + 1 2.123 129900.2 1.0 3710 4322 8027 SUDHL4_400M_050219_1,8034 SUDHL4_400M_050219_1,8034, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8035 42.737 146.0 344230.0 25 0 53668.0 + 44252 YLKLLTRAE 9 79 553.8301807015122 1105.6458084698245 2 553.8301269412041 MULTI CID FTMS 0 0 0 8027 391914.25 1.0 0 0.0 8 Unmodified _YLKLLTRAE_ REV__ENSG00000099957|ENST00000413302|P2RX6;REV__ENST00000487342.1_1_22:21377642-21380401:+|nuORF;REV__nc|ENSG00000099957|O15547-2|P2RX6 4.3292370932331545 0.7635526921153418 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.123 43985.0 1.0 3711 4322 8027 SUDHL4_400M_050219_1,8035 SUDHL4_400M_050219_1,8035,YLKLLTRAE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8036 42.741 202.0 515970.0 25 0 75796.0 + 37422 TLDAGNIKL 9 128 472.7733655758984 943.5321782185968 2 472.7740356326103 MULTI CID FTMS 0 0 0 8027 316927.375 0.6987829061850188 -1 0.135009765625 9 Unmodified _TLDAGNIKL_ ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A 24.020572477871973 0.2255576514309169 5 [{I|L}T]DAM 5 5 39.737 0.0 0.0 4.2115 0.0 0.0 0.0 409.2741488092407 409.2741488092407 26.096981436199016 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 [{I|L}T]DAM 4.2115 - 326 + 1 2.123 83653.9 1.0 3712 4322 8027 SUDHL4_400M_050219_1,8036 SUDHL4_400M_050219_1,8036,TLDAGNIKL False True TLDAGNIKL 42.740931 472.77403563261 3624747.25 8027.0 nc|ENSG00000196504|O75400-3|PRPF40A;;ENSG00000196504|ENST00000545856|PRPF40A;;nc|ENSG00000196504|O75400|PRPF40A;;nc|ENSG00000196504|O75400-2|PRPF40A 2.969852765401205 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8037 42.755 800.0 245480.0 25 0 22998.0 + 13489 HLYDIHVTV 9 167 548.7932011172701 1095.57184930134 2 548.7930175662041 MULTI CID FTMS 0 0 0 8027 213487.96875 1.0 0 0.0 10 Unmodified _HLYDIHVTV_ ENSG00000213965|ENST00000397061|NUDT19 61.357469665136826 0.0253304979873734 5 [H{I|L}]DY{I|L}HVTV 9 2 + 80.812 0.0 0.0 7.3763 7.3763 89.977 0.0 0.0 0.0 12.865071892553814 16.478174818886373 12.865071892553814 6.020599913279625 0 0.9476212463643424 1.6989700043360187 0.2742275032520141 0.0 [H{I|L}]DY{I|L}HVTV;[H{I|L}]DY{I|L}VHTV;[H{I|L}]V[YE]HVTV;{NN|[MP]|[D{I|L}]|[EV]}HY{I|L}HVTV;[H{I|L}]DYV{I|L}HTV;[H{I|L}]V[YE]VHTV;{NN|[MP]|[D{I|L}]|[EV]}YH{I|L}HVTV;[H{I|L}]DY{I|L}S{I|L}HV;[H{I|L}]DY{I|L}VTHV;[H{I|L}]VM{M(Oxidation (M))|F}{I|L}HTV 7.3763;6.8267;6.4891;6.202;6.063;5.9395;5.8805;5.8412;5.8412;5.7415 -;-;-;-;-;-;-;-;-;- 3517 1 2.123 148276.7 0.9900000095367432 3713 4322 8027 SUDHL4_400M_050219_1,8037 SUDHL4_400M_050219_1,8037,HLYDIHVTV True True HLYDIHVTV 42.754762 548.793017566204 1419231.375 8027.0 ENSG00000213965|ENST00000397061|NUDT19 6.77542511622111 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8038 42.769 800.0 204820.0 25 0 11754.0 + -1 HSFGGGTGSGFTSL 14 174 656.3013037971566 1310.5880546611131 2 656.3013793826103 MULTI CID FTMS 0 0 0 8027 172662.015625 1.0 0 0.0 11 Carbamidomethyl (C) _RRC(Carbamidomethyl (C))LACECTSL_ ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000167553|ENST00000301072|TUBA1C;nc|ENSG00000183785|Q9NY65-2|TUBA8;chr2:219252230-219277814|45|11.58|0.35|5.03|-|ENST00000427737|TUBA4A,TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000127824|P68366-2|TUBA4A 31.26834338654808 0.3580123756476716 5 {[MS]|[{M(Oxidation (M))|F}A]}T{M(Oxidation (M))|F}GSGTGNHC{I|L} 13 -1 + 66.377 0.0 0.0 5.0646 5.0646 78.247 0.0 0.0 0.0 0.6666044947467924 0.6666044947467924 0.6666044947467924 0.6666044947467924 0 0.6050541008457975 0.0 2.254432191740108 0.3494850021680094 {[MS]|[{M(Oxidation (M))|F}A]}T{M(Oxidation (M))|F}GSGTGNHC{I|L};[HS]{M(Oxidation (M))|F}NGTGSG{M(Oxidation (M))|F}T{[TV]|[{I|L}S]};[HS]H{[QG]|[NA]}PGSG{M(Oxidation (M))|F}T{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}T{M(Oxidation (M))|F}GSGP{[QG]|[NA]}DD{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}HNGTGSG{M(Oxidation (M))|F}T{[TV]|[{I|L}S]};{[WT]|[RM]}S[TA]PGSG{M(Oxidation (M))|F}T{[TV]|[{I|L}S]};{[MG]|[TS]}W[TA]PGSG{M(Oxidation (M))|F}T{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}T{M(Oxidation (M))|F}GSGTGGGHC{I|L};{[MS]|[{M(Oxidation (M))|F}A]}T{M(Oxidation (M))|F}GSGT[NS]HW;{[TV]|[{I|L}S]}[WC(Carbamidomethyl (C))]PGSG{M(Oxidation (M))|F}T{[TV]|[{I|L}S]} 5.0646;5.0138;4.4065;4.3811;4.323;4.2142;4.1567;4.1057;4.1039;4.0922 -;-;-;-;-;-;-;-;-;- 6725 + 1 2.123 118040.1 0.9399999976158142 3714 4322 8027 SUDHL4_400M_050219_1,8038 SUDHL4_400M_050219_1,8038,RRCLACECTSL False False HSFGGGTGSGFTSL 42.768597 656.30137938261 1944839.875 8027.0 ENSG00000127824|ENST00000248437|TUBA4A;;ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000167553|ENST00000301072|TUBA1C;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;chr2:219252230-219277814|45|11.58|0.35|5.03|-|ENST00000427737|TUBA4A,TUBA4A;;ENSG00000167552|ENST00000301071|TUBA1A;;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000127824|P68366-2|TUBA4A 7.645482381184895 2.0 False 14.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8039 42.782 800.0 260280.0 25 0 47756.0 27400 PIKHAKRT 8 183 475.799175723384 949.583798513568 2 475.7985412478447 MULTI CID FTMS 0 0 0 8027 162226.828125 0.9788577444137554 -1 0.135009765625 12 Unmodified _PIKHAKRT_ ENSG00000168631|ENST00000462446|MUCL3 4.75600775471527 0.7954636275367004 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L} 6 6 20.379 0.0 0.0 2.1461 0.0 0.0 0.0 217.138949230618 217.138949230618 5.686362358410122 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L} 2.1461 - 450 1 2.123 159821.1 0.800000011920929 3715 4322 8027 SUDHL4_400M_050219_1,8039 SUDHL4_400M_050219_1,8039,PIKHAKRT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8040 42.796 800.0 187210.0 25 0 18527.0 + 17306 KLSEIVREF 9 164 560.8210547096633 1119.6275564861264 2 560.8215820193291 MULTI CID FTMS 0 0 0 8027 157415.84375 1.0 0 0.0 13 Unmodified _KLSEIVREF_ ENSG00000102038|ENST00000371121|SMARCA1;ENSG00000153147|ENST00000283131|SMARCA5;nc|ENSG00000102038|P28370-2|SMARCA1;nc|ENSG00000102038|P28370|SMARCA1 26.020703789607367 0.2001090068861241 5 K{I|L}SE{I|L}V{[RE]|[WV]}{M(Oxidation (M))|F} 9 0 + 55.337 0.0 0.0 4.9424 4.9424 80.333 0.0 0.0 0.0 30.274979200736176 0.8232913608582848 0.8232913608582848 2.648888106515294 0 0.7614393726401688 0.0 0.4247425010840047 0.0 + + K{I|L}SE{I|L}V{[RE]|[WV]}{M(Oxidation (M))|F};K{I|L}SE{I|L}V[MT]S{I|L};K{I|L}SE{I|L}V{[MS]|[{M(Oxidation (M))|F}A]}T{I|L};K{I|L}SE{I|L}V[MT]TV;K{I|L}SE[KG]RR{M(Oxidation (M))|F};K{I|L}S[WQ]RR{M(Oxidation (M))|F};K{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[RV]DPV;K{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[RV]DVP;K{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[RV]DPV;K{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[RV]DVP 4.9424;4.7058;4.6357;4.4751;3.2677;2.6891;2.6865;2.4526;1.3428;1.1089 +;-;-;-;-;-;-;-;-;- + 707 + 1 2.123 113082.2 0.8799999952316284 3716 4322 8027 SUDHL4_400M_050219_1,8040 SUDHL4_400M_050219_1,8040,KLSEIVREF False True KLSEIVREF 42.796245 560.821582019329 1246430.0 8027.0 nc|ENSG00000102038|P28370|SMARCA1;;nc|ENSG00000102038|P28370-2|SMARCA1;;ENSG00000102038|ENST00000371121|SMARCA1;;ENSG00000153147|ENST00000283131|SMARCA5 4.99464480082194 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8041 42.799 56.0 1017500.0 25 0 147830.0 + 40455 VILPTVHEV 9 73 503.7998864018457 1005.5852198704914 2 503.8006469607353 MULTI CID FTMS 0 0 0 8027 473462.5 0.4181863187481328 -1 0.135009765625 14 Unmodified _VILPTVHEV_ ENSG00000174839|ENST00000311128|DENND6A;ENST00000487662.1_1_3:57643405-57651906:-|nuORF 50.855029805455786 0.0384952370514206 5 [{I|L}V]{I|L}PTV[HD]{I|L} 9 2 + 55.406 0.0 0.0 5.5098 5.5098 91.922 0.0 0.0 0.0 36.53216923517344 5.201812293369841 5.201812293369841 25.732696852314305 0 0.7134679910804405 2.0 1.0189301784845295 0.0 [{I|L}V]{I|L}PTV[HD]{I|L};[{I|L}V]{I|L}[{I|L}T][WY]V;[{I|L}V]{I|L}HH{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};[{I|L}V][EP][KP]NP{I|L} 5.5098;2.9509;2.7107;2.0454 -;-;-;- 187 + 1 2.123 49890.3 1.0 3717 4322 8027 SUDHL4_400M_050219_1,8041 SUDHL4_400M_050219_1,8041,VILPTVHEV True True VILPTVHEV 42.799116 503.800646960735 17956994.0 8027.0 ENST00000487662.1_1_3:57643405-57651906:-|nuORF;;ENSG00000174839|ENST00000311128|DENND6A 6.356663862864177 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8042 42.811 703.0 646500.0 25 0 76944.0 -1 0 190 867.4070624541464 1732.7995719750927 2 867.4006835818291 MULTI CID FTMS 0 0 0 8027 333006.15625 0.0303653989894071 19 -0.8455657958984375 15 5 NMPN{I|L}DA{M(Oxidation (M))|F}SC{I|L}AAPAAQ 17 -1 + 131.15 0.0 0.0 7.5687 7.5687 90.963 0.0 0.0 0.0 24.22763592397069 24.001894508712752 24.001894508712752 6.726410656136693 0 0.7940228147639203 1.5228787452803376 0.9559771852360796 3.1858003656410965 NMPN{I|L}DA{M(Oxidation (M))|F}SC{I|L}AAPAAQ;NMPN{I|L}W{M(Oxidation (M))|F}SC{I|L}AAPAAQ;NMPGG{I|L}DA{M(Oxidation (M))|F}SC{I|L}AAPAAQ;NMPN{I|L}DADQ[YT][RP]AQ;NMPN{I|L}WDQ[YT][NP]{I|L}Q;NMPN{I|L}DA{M(Oxidation (M))|F}SRMAPAAQ;NMPN{I|L}D{[CT]|[{M(Oxidation (M))|F}G]}TC{I|L}AAPAAQ;NMPN{I|L}DWQ[YT][NP]{I|L}Q;NMPGG{I|L}W{M(Oxidation (M))|F}SC{I|L}AAPAAQ;NMPN{I|L}WDQ[YT][RP]AQ 7.5687;7.1805;7.0494;7.0234;6.9873;6.9141;6.8786;6.8291;6.6604;6.6373 -;-;-;-;-;-;-;-;-;- 56197 + 1 2.123 297858.2 1.0 3718 4322 8027 SUDHL4_400M_050219_1,8042 SUDHL4_400M_050219_1,8042, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8043 42.825 800.0 178730.0 25 0 66865.0 -1 LKKQEKRRMRP 11 116 743.4415959382845 0 743.4426757693291 PEAK CID FTMS 0 0 0 8027 169255.234375 1.0 0 0.0 16 Oxidation (M) _LKKQEKRRM(Oxidation (M))RP_ ENSG00000174502|ENST00000367135|SLC26A9;nc|ENSG00000174502|Q7LBE3-2|SLC26A9 2.9952420565917617 0.4761840153648598 5 S{I|L}EA 4 -1 12.172 0.0 0.0 0.81971 0.0 0.0 885.571475328032 196.07337366275627 1081.6448489907882 0.0 0.0 0.0 0.0 0 0.0 0.0 1.035666875892183 0.0 S{I|L}EA 0.81971 - 275 + 1 2.123 103816.0 0.8700000047683716 3719 4322 8027 SUDHL4_400M_050219_1,8043 SUDHL4_400M_050219_1,8043,LKKQEKRRMRP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8044 42.84 800.0 203530.0 25 0 33233.0 + 37884 TLVYHVVGV 9 108 986.5638964800012 985.5566200134012 1 987.466845691204 MULTI CID FTMS 0 0 0 -1 0 17 Unmodified _TLVYHVVGV_ ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3 16.942295170755138 0.3780752226737986 5 GVV[KS]PQR 8 8 24.844 0.0 0.0 2.5208 0.0 0.0 116.0700017999746 0.0 116.0700017999746 0.0 -4.083624920952502 -4.083624920952502 0.0 0 0.274227503252014 0.0 0.8737125054200234 0.0 GVV[KS]PQR 2.5208 - 439 + 1 2.123 114978.7 0.7900000214576721 3720 4322 8027 SUDHL4_400M_050219_1,8044 SUDHL4_400M_050219_1,8044,TLVYHVVGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8045 42.854 800.0 109900.0 25 0 26303.0 39950 VGAFKKVSIVP 11 108 572.8564643851616 1143.6983758371232 2 572.8566772341728 MULTI CID FTMS 0 0 0 8027 146965.171875 0.566064991813343 -2 0.1873512268066406 18 Unmodified _VGAFKKVSIVP_ ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-2|USH2A;nc|ENSG00000042781|O75445-3|USH2A 6.723162845929126 0.8434276150410019 5 Y 1 11 10.596 0.0 0.0 0.92646 0.0 0.0 962.6236515713014 0.0 962.6236515713014 0.0 0.918221984730634 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.92646 - 41 + 1 2.123 71897.5 0.8399999737739563 3721 4322 8027 SUDHL4_400M_050219_1,8045 SUDHL4_400M_050219_1,8045,VGAFKKVSIVP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8046 42.868 800.0 215180.0 25 0 14743.0 + 15140 INTIPAPSAPV 11 205 540.3083656542829 1078.6021783753656 2 540.3089477419853 MULTI CID FTMS 0 0 0 8027 154353.203125 0.7632221019539854 1 -0.1727294921875 19 Unmodified _INTIPAPSAPV_ ENSG00000186628|ENST00000334574|FSD2;nc|ENSG00000186628|A1L4K1-2|FSD2 26.268140514670165 0.4754186812857754 5 E{I|L}KATQT 7 9 56.597 0.0 0.0 5.2472 0.0 0.0 0.0 304.1672457330688 304.1672457330688 33.66492066198104 0.0 0.0 0.0 0 0.4025608600955408 2.0 1.0387254899964358 0.0 E{I|L}KATQT 5.2472 - 1351 + 1 2.123 136624.0 0.8100000023841858 3722 4322 8027 SUDHL4_400M_050219_1,8046 SUDHL4_400M_050219_1,8046,INTIPAPSAPV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8047 42.883 800.0 202450.0 25 0 23396.0 + 17155 KLIELKAEI 9 188 528.8360430260146 1055.6575331188292 2 528.8372070193291 MULTI CID FTMS 0 0 0 8027 127997.65625 1.0 0 0.0 20 Unmodified _KLIELKAEI_ ENSG00000205250|ENST00000379378|E2F4;ENST00000567007.5_1_16:67226831-67232023:+|nuORF;ENST00000568485.1_1_16:67226831-67227071:+|nuORF 49.52724829834842 0.0414064571532091 5 {I|L}{I|L}[SG]EA{M(Oxidation (M))|F}{I|L} 8 5 46.974 0.0 0.0 4.4497 0.0 0.0 0.0 222.1937238668553 222.1937238668553 -0.6157941561259506 0.0 -0.6157941561259506 0.0 0 0.0 2.0 1.3609243748081783 0.0 {I|L}{I|L}[SG]EA{M(Oxidation (M))|F}{I|L} 4.4497 - 6870 1 2.123 124872.6 0.7599999904632568 3723 4322 8027 SUDHL4_400M_050219_1,8047 SUDHL4_400M_050219_1,8047,KLIELKAEI True True KLIELKAEI 42.882886 528.837207019329 1065049.75 8027.0 ENST00000568485.1_1_16:67226831-67227071:+|nuORF;;ENSG00000205250|ENST00000379378|E2F4;;ENST00000567007.5_1_16:67226831-67232023:+|nuORF 0.7448260206729174 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8049 42.888 42.0 1232100.0 25 0 117600.0 + 9223 FGIDRPAEL 9 86 509.2720433954219 1016.529533857644 2 509.2719909548759 MULTI CID FTMS 0 0 0 8048 434119.59375 0.3017721142932019 2 -0.1567535400390625 1 Unmodified _FGIDRPAEL_ ENSG00000105705|ENST00000247001|SUGP1;ENST00000588731.6_1_19:19387459-19414804:-|nuORF;ENST00000589144.5_1_19:19387459-19413207:-|nuORF;ENST00000592188.1_1_19:19387459-19391209:-|nuORF 17.11289562659939 0.3734572693229295 5 {I|L}GE 3 7 29.693 0.0 0.0 2.921 0.0 0.0 699.3562842545774 0.0 699.3562842545774 0.0 18.43367773959504 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {I|L}GE 2.921 - 24 1 2.108 48178.6 1.0 3724 4323 8048 SUDHL4_400M_050219_1,8049 SUDHL4_400M_050219_1,8049,FGIDRPAEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8050 42.889 45.0 1102500.0 25 0 177370.0 + -1 LICLPSVSI 9 91 501.2904933380042 1000.5664337428084 2 501.2910949587822 MULTI CID FTMS 0 0 0 8048 902674.3125 0.3175867339116869 19 -0.6769599914550781 2 Carbamidomethyl (C) _LIC(Carbamidomethyl (C))LPSVSI_ REV__ENST00000528808.1_1_11:60150614-60157189:+|nuORF 7.289230182591677 0.6602208344931196 5 {I|L} 1 -1 10.278 0.0 0.0 1.0272 0.0 0.0 869.471522099057 0.0 869.471522099057 0.0 -10.691513490831408 -10.691513490831408 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0272 + + 18 + 1 2.108 47749.4 1.0 3725 4323 8048 SUDHL4_400M_050219_1,8050 SUDHL4_400M_050219_1,8050,LICLPSVSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8051 42.89 22.0 2159800.0 25 0 250040.0 + 31007 RLFDEPQLA 9 58 544.790495846685 1087.5664387601698 2 544.7903320193291 MULTI CID FTMS 0 0 0 8048 1826524.25 0.9928177263308317 -1 0.1727294921875 3 Unmodified _RLFDEPQLA_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1 11.494710602746466 0.5255349189887087 5 EPQ[{I|L}A] 5 4 31.466 0.0 0.0 2.8932 0.0 0.0 531.2802752700559 0.0 531.2802752700559 0.0 25.981362441963327 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + EPQ[{I|L}A] 2.8932 + + 21 1 2.108 44533.9 1.0 3726 4323 8048 SUDHL4_400M_050219_1,8051 SUDHL4_400M_050219_1,8051,RLFDEPQLA False True RLFDEPQLA 42.889955 544.790332019329 49326556.0 8048.0 nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1;;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;;ENSG00000133243|ENST00000255608|BTBD2 5.976346651713054 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8052 42.891 29.0 796200.0 25 0 64619.0 + 15994 ITDQKKWL 8 52 516.2961824999164 1030.5778120666328 2 516.2960082888603 MULTI CID FTMS 0 0 0 8048 1684803.5 1.0 0 0.0 4 Unmodified _ITDQKKWL_ REV__ENSG00000134759|ENST00000358232|ELP2;REV__ENST00000541294.1_1_18:33739943-33744659:+|nuORF;REV__nc|ENSG00000134759|Q6IA86-2|ELP2;REV__nc|ENSG00000134759|Q6IA86-3|ELP2;REV__nc|ENSG00000134759|Q6IA86-4|ELP2;REV__nc|ENSG00000134759|Q6IA86-5|ELP2;REV__nc|ENSG00000134759|Q6IA86-6|ELP2;REV__nc|ENSG00000134759|Q6IA86-7|ELP2 2.577480529830294 0.808687252328423 5 T 1 -1 1.9897 0.0 0.0 0.19307 0.0 0.0 844.4404199541312 82.06697260074452 926.5073925548758 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.19307 + + 2 + 1 2.108 23601.2 1.0 3727 4323 8048 SUDHL4_400M_050219_1,8052 SUDHL4_400M_050219_1,8052,ITDQKKWL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8053 42.892 33.0 1936500.0 25 0 401800.0 + 23722 TLVYHVVGV 9 80 493.7845596749932 985.5545664167864 2 493.7867309451103 MULTI CID FTMS 0 0 0 8048 1582590.125 1.0 0 0.0 5 Unmodified _LTVECLPLV_ nc|ENSG00000189091|Q15393-2|SF3B3;ENSG00000189091|ENST00000302516|SF3B3 16.942295170755138 0.3780752226737986 5 [{I|L}T]VS 4 6 38.672 0.0 0.0 3.9239 0.0 0.0 0.0 582.3053682916624 582.3053682916624 11.760912590556812 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 [{I|L}T]VS 3.9239 - 199 + 1 2.108 57268.5 1.0 3728 4323 8048 SUDHL4_400M_050219_1,8053 SUDHL4_400M_050219_1,8053,LTVECLPLV False False TLVYHVVGV 42.892313 493.78673094511 12428908.25 8048.0 nc|ENSG00000189091|Q15393-2|SF3B3;;ENSG00000189091|ENST00000302516|SF3B3 5.80951992670695 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8054 42.894 47.0 1012900.0 25 0 171900.0 + + 14488 VAYWRQAGL 9 73 531.816818148373 1061.619083363546 2 531.8168823122978 MULTI CID FTMS 0 0 0 8048 982802.1875 0.9152032185692346 -2 0.3077392578125 6 Unmodified _IGGVFIKNSK_ nc|ENSG00000180389|Q5VTU8|ATP5F1EP2;ENSG00000124172|ENST00000243997|ATP5F1E 4.3292370932331545 0.7066112369704343 5 AYW 3 -1 16.198 0.0 0.0 1.5258 0.0 0.0 98.12800777936476 540.2902926080686 638.4183003874334 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AYW 1.5258 - 22 + 1 2.108 45113.9 1.0 3729 4323 8048 SUDHL4_400M_050219_1,8054 SUDHL4_400M_050219_1,8054,IGGVFIKNSK False False VAYWRQAGL 42.893588 531.816882312298 3176694.0 8048.0 nc|ENSG00000180389|Q5VTU8|ATP5F1EP2;;ENSG00000124172|ENST00000243997|ATP5F1E 5.862270673116048 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8055 42.895 44.0 1254300.0 25 0 79599.0 + 26188 NQFPGFKEV 9 95 533.2715420158133 1064.5285310984266 2 533.2711669802666 MULTI CID FTMS 0 0 0 8048 740975.9375 0.1317448298031773 -3 0.3600807189941406 7 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 26.268140514670165 0.1969607489560049 5 {[VA]|[{I|L}G]}MK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}A 8 8 34.345 0.0 0.0 3.2263 0.0 0.0 0.0 168.04309343657033 168.04309343657033 23.23560263425936 0.0 0.0 0.0 0 1.0 0.721246399047171 0.0 0.0 {[VA]|[{I|L}G]}MK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}A 3.2263 - 309 1 2.108 48511.5 1.0 3730 4323 8048 SUDHL4_400M_050219_1,8055 SUDHL4_400M_050219_1,8055,NQFPGFKEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8056 42.896 52.0 1308300.0 25 0 138950.0 11344 GFLKRHMK 8 93 508.79696659071726 1015.5793802482344 2 508.7967101931572 MULTI CID FTMS 0 0 0 8048 717086.625 0.9914141394939214 -1 0.1727294921875 8 Unmodified _GFLKRHMK_ ENSG00000005889|ENST00000304543|ZFX;ENSG00000067646|ENST00000155093|ZFY;ENSG00000147180|ENST00000674551|ZNF711;nc|ENSG00000005889|P17010-2|ZFX;nc|ENSG00000005889|P17010-3|ZFX;nc|ENSG00000067646|P08048-2|ZFY;nc|ENSG00000067646|P08048-3|ZFY;nc|ENSG00000147180|Q9Y462-2|ZNF711;nc|ENSG00000147180|Q9Y462|ZNF711 5.760428011301431 0.7893668129297577 5 W 1 8 13.979 0.0 0.0 1.3765 0.0 0.0 811.4889241708893 0.0 811.4889241708893 0.0 0.1671187774347515 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.3765 - 20 + 1 2.108 56927.4 1.0 3731 4323 8048 SUDHL4_400M_050219_1,8056 SUDHL4_400M_050219_1,8056,GFLKRHMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8057 42.899 116.0 513850.0 25 0 47143.0 + 10490 FTSPSPFSSTV 11 84 578.7772002182478 1155.5398475032955 2 578.7775146365166 MULTI CID FTMS 0 0 0 8048 492353.625 1.0 0 0.0 9 Unmodified _FTSPSPFSSTV_ REV__ENSG00000166507|ENST00000309979|NDST2 22.736283301280096 0.5583477779825423 5 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}[DG]VMV 10 -1 + 35.411 0.0 0.0 3.0645 3.0645 80.315 0.0 0.0 0.0 3.500608331141453 6.458734641205624 3.500608331141453 8.27182087833808 0 0.0 2.0 0.3807196863200844 0.0 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}[DG]VMV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[DG]{[CP]|[EA]}A{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[DG]{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}EV;[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}[WD]TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[DG]{[CP]|[EA]}AT[{M(Oxidation (M))|F}V];{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}[RD][DG]VMV;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}[RD][WD]TV;[{M(Oxidation (M))|F}T]V[DG]{[CP]|[EA]}A{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}T]V[DG]{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}EV;[{M(Oxidation (M))|F}T]V[DG]{[CP]|[EA]}AT[{M(Oxidation (M))|F}V] 3.0645;2.3486;2.0892;2.0246;1.5533;1.4369;1.3275;1.1786;0.91917;0.38319 -;-;-;-;-;-;-;-;-;- 207 + 1 2.108 52036.2 1.0 3732 4323 8048 SUDHL4_400M_050219_1,8057 SUDHL4_400M_050219_1,8057,FTSPSPFSSTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8058 42.902 183.0 275520.0 25 0 13235.0 -1 0 68 908.4247394008294 1814.8349258684584 2 908.9269286990166 MULTI CID FTMS 0 0 0 8048 391268.46875 1.0 0 0.0 10 5 [NP]{I|L}NET 6 -1 20.635 0.0 0.0 1.137 0.0 0.0 0.0 1143.48315519879 1143.48315519879 8.895840698002997 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}NET 1.137 - 118 1 2.108 38775.7 1.0 3733 4323 8048 SUDHL4_400M_050219_1,8058 SUDHL4_400M_050219_1,8058, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8059 42.907 257.0 383050.0 25 0 33485.0 + 16730 KEYVGIVRL 9 114 538.8259042769992 1075.6372556207982 2 538.8265258669853 MULTI CID FTMS 0 0 0 8048 243657.203125 0.8913367369452316 -1 0.1727294921875 11 Unmodified _KEYVGIVRL_ ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1 69.10491478415734 0.0214449631113747 5 KEYV{I|L} 5 4 50.745 0.0 0.0 4.7177 0.0 0.0 0.0 440.2629793756469 440.2629793756469 17.697953115119063 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.3494850021680094 0.0 KEYV{I|L} 4.7177 - 136 + 1 2.108 77052.2 1.0 3734 4323 8048 SUDHL4_400M_050219_1,8059 SUDHL4_400M_050219_1,8059,KEYVGIVRL True True KEYVGIVRL 42.90694 538.826525866985 2567615.5 8048.0 nc|ENSG00000130826|O60832-2|DKC1;;ENSG00000130826|ENST00000369550|DKC1 4.058303912480672 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8060 42.912 300.0 232830.0 25 0 26463.0 + 32469 SAIALGHRS 9 101 456.2566733366788 910.4987937401576 2 456.2563049197197 MULTI CID FTMS 0 0 0 8048 179303.375 0.1756290506090242 11 -0.5934562683105469 12 Unmodified _SAIALGHRS_ REV__ENSG00000119946|ENST00000356713|CNNM1;REV__nc|ENSG00000119946|Q9NRU3-2|CNNM1 4.3292370932331545 0.7635526921153418 5 E 1 -1 2.7642 0.0 0.0 0.30359 0.0 0.0 344.2048617106639 434.2396029108032 778.4444646214671 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.30359 - 5 + 1 2.108 62128.2 1.0 3735 4323 8048 SUDHL4_400M_050219_1,8060 SUDHL4_400M_050219_1,8060,SAIALGHRS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8061 42.926 800.0 149800.0 25 0 5734.1 -1 0 137 873.9145653402629 1745.8145777473258 2 874.4127685427666 MULTI CID FTMS 0 0 0 8048 118608.0625 0.1483496674163381 -10 0.6424102783203125 13 5 [MN]PN{I|L}NEAQ[YQ]SP{I|L}Q 15 -1 + 76.152 0.0 0.0 4.362 4.362 79.576 0.0 0.0 0.0 7.6709779556855295 14.827796776480469 7.6709779556855295 3.442798834023592 0 0.4929928190999391 1.5228787452803376 0.6139829889124311 1.1593793813122064 [MN]PN{I|L}NEAQ[YQ]SP{I|L}Q;[MN]PN{I|L}NEAQ[YQ]TVPQ;[MN]PQVNEAQ[YQ]SP{I|L}Q;[MN]PN{I|L}QDAQ[YQ]SP{I|L}Q;[MN]PQVNEAQ[YQ]TVPQ;[MN]PN{I|L}NAEQ[YQ]SP{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NEAQ[YQ]SP{I|L}Q;[MN]PN{I|L}NEAQ[YQ]S{I|L}PQ;[MN]PN{I|L}QDAQ[YQ]TVPQ;[MN]PQVQDAQ[YQ]SP{I|L}Q 4.362;4.1648;4.134;4.0171;3.9368;3.9316;3.9226;3.9069;3.8199;3.7892 -;-;-;-;-;-;-;-;-;- 15817 + 1 2.108 83373.6 0.7900000214576721 3736 4323 8048 SUDHL4_400M_050219_1,8061 SUDHL4_400M_050219_1,8061, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8062 42.94 800.0 88751.0 25 0 17781.0 + -1 EERCKEQYEPY 11 115 765.8334680221378 1529.6523831110756 2 765.8339721560478 MULTI CID FTMS 0 0 0 8048 83026.5703125 1.0 0 0.0 14 Carbamidomethyl (C) _EERC(Carbamidomethyl (C))KEQYEPY_ REV__ENSG00000171954|ENST00000269703|CYP4F22 4.897010918128616 0.8520435188433833 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}D[Y{I|L}]{M(Oxidation (M))|F} 7 -1 19.911 0.0 0.0 1.3017 0.0 0.0 0.0 614.1636495507818 614.1636495507818 0.9320442733174944 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}D[Y{I|L}]{M(Oxidation (M))|F} 1.3017 - 179 1 2.108 55800.0 0.7200000286102295 3737 4323 8048 SUDHL4_400M_050219_1,8062 SUDHL4_400M_050219_1,8062,EERCKEQYEPY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8063 42.942 71.0 790680.0 25 0 214340.0 18758 LALYFLFA 8 58 479.2771901509902 0 479.2779113650322 PEAK CID FTMS 0 0 0 8048 1035028.625 0.5384055936453251 1 -0.1011619567871093 15 Unmodified _LALYFLFA_ ENSG00000140931|ENST00000567572|CMTM3 0.7936320650641473 0.5979579398327216 5 P 1 8 2.4743 0.0 0.0 0.25867 0.0 0.0 751.4624480736617 104.99869714908436 856.461145222746 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.25867 - 4 + 1 2.108 50072.6 1.0 3738 4323 8048 SUDHL4_400M_050219_1,8063 SUDHL4_400M_050219_1,8063,LALYFLFA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8064 42.945 160.0 314700.0 25 0 77815.0 24163 LYSFFLGS 8 72 467.2414546736264 932.4683564140528 2 467.2411682009697 MULTI CID FTMS 0 0 0 8048 308743.75 0.3939320477385131 1 -0.1011619567871093 16 Unmodified _LYSFFLGS_ ENST00000426004.5_1_20:44003886-44004282:+|nuORF 5.760428011301431 0.7893668129297577 5 V 1 8 10.969 0.0 0.0 1.1764 0.0 0.0 815.3890087351451 0.0 815.3890087351451 0.0 -10.245681914907363 -10.245681914907363 0.0 0 0.0 0.0 0.0 0.0 V 1.1764 - 31 + 1 2.108 42617.8 1.0 3739 4323 8048 SUDHL4_400M_050219_1,8064 SUDHL4_400M_050219_1,8064,LYSFFLGS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8065 42.952 319.0 210380.0 25 0 22798.0 + 40948 REPFPDGAEL 10 101 565.8484653212049 1129.6823777092095 2 565.8481933474541 MULTI CID FTMS 0 0 0 8048 200256.0625 1.0 0 0.0 17 Unmodified _VLTVIGISLCI_ ENSG00000141569|ENST00000269383|TRIM65 9.38312468134398 0.8308777417566128 5 [{I|L}T][YG]{I|L} 5 7 17.381 0.0 0.0 1.5386 0.0 0.0 0.0 579.363077742666 579.363077742666 4.282508810719094 0.0 0.0 0.0 0 0.0 2.0 0.5418727718234408 0.0 [{I|L}T][YG]{I|L} 1.5386 - 147 1 2.108 55219.7 1.0 3740 4323 8048 SUDHL4_400M_050219_1,8065 SUDHL4_400M_050219_1,8065,VLTVIGISLCI False False REPFPDGAEL 42.951909 565.848193347454 371537.09375 8048.0 ENSG00000141569|ENST00000269383|TRIM65 -0.249224046866099 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8066 42.966 800.0 99083.0 25 0 19005.0 + 2077 APPLPLRMPVS 11 111 589.343034864291 0 589.3425781130791 PEAK CID FTMS 0 0 0 8048 148044.875 1.0 0 0.0 18 Unmodified _APPLPLRMPVS_ REV__ENSG00000105122|ENST00000343625|RASAL3;REV__nc|ENSG00000105122|Q86YV0-2|RASAL3 5.296884461304476 0.47618401536486 5 {I|L} 1 -1 2.4743 0.0 0.0 0.21028 0.0 0.0 755.4125273928413 305.1517122858032 1060.5642396786443 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.21028 + + 4 + 1 2.108 62644.7 0.7099999785423279 3741 4323 8048 SUDHL4_400M_050219_1,8066 SUDHL4_400M_050219_1,8066,APPLPLRMPVS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8067 42.97 228.0 235690.0 25 0 14987.0 + 36652 TAVENMPSL 9 99 481.2363318441167 960.4581107550332 2 481.2369567751884 MULTI CID FTMS 0 0 0 8048 150024.828125 1.0 0 0.0 19 Unmodified _TAVENMPSL_ ENSG00000169710|ENST00000306749|FASN 36.12702656103203 0.0967173616627612 5 {M(Oxidation (M))|F}PS{I|L} 4 5 30.875 0.0 0.0 3.2146 0.0 0.0 498.2201174462427 0.0 498.2201174462427 0.0 10.92388287141683 0.0 0.0 0 0.5 0.0 0.6462566630072955 0.0 + {M(Oxidation (M))|F}PS{I|L} 3.2146 + + 138 + 1 2.108 43430.4 1.0 3742 4323 8048 SUDHL4_400M_050219_1,8067 SUDHL4_400M_050219_1,8067,TAVENMPSL True True TAVENMPSL 42.970025 481.236956775188 584284.75 8048.0 ENSG00000169710|ENST00000306749|FASN 4.037389039993286 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8068 42.984 800.0 119310.0 25 0 9036.0 + 43709 YAYAPSSLGGAM 12 150 594.2725285604699 1186.5305041877398 2 594.2726928591728 MULTI CID FTMS 0 0 0 8048 95120.015625 1.0 0 0.0 20 Unmodified _YAYSKQPEVC_ nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;ENSG00000198492|ENST00000373812|YTHDF2 7.910154910731844 0.6900473968920092 5 M 1 10 13.495 0.0 0.0 1.1373 0.0 0.0 1037.478988540082 0.0 1037.478988540082 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.1373 - 103 + 1 2.108 74736.3 0.5899999737739563 3743 4323 8048 SUDHL4_400M_050219_1,8068 SUDHL4_400M_050219_1,8068,YAYSKQPEVC False False YAYAPSSLGGAM 42.983859 594.272692859173 366839.40625 8048.0 nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;;ENSG00000198492|ENST00000373812|YTHDF2 0.6995339045921961 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8070 42.988 19.0 2825700.0 25 0 660220.0 43399 WQRVILCK 8 74 523.303409344533 1044.5922657558658 2 523.3037597537041 MULTI CID FTMS 0 0 0 8069 3137442.25 1.0 0 0.0 1 Unmodified _WQRVILCK_ ENST00000441433.1_1_7:26961755-26962307:+|nuORF 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.101 51390.8 1.0 3744 4324 8069 SUDHL4_400M_050219_1,8070 SUDHL4_400M_050219_1,8070,WQRVILCK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8071 42.992 165.0 339650.0 25 0 25677.0 + 37936 TMADQIVTV 9 95 489.2520384501585 976.4895239671172 2 489.2520324587822 MULTI CID FTMS 0 0 0 8069 210316.953125 0.2006673254855882 2 -0.1205825805664062 2 Unmodified _TMADQIVTV_ ENSG00000116266|ENST00000370008|STXBP3 30.63653989081413 0.1413794767160703 5 T{M(Oxidation (M))|F} 2 7 19.464 0.0 0.0 1.9933 0.0 0.0 710.3625066674223 0.0 710.3625066674223 0.0 0.2680249241196719 0.0 0.0 0 0.0 0.0 0.0 0.0 + T{M(Oxidation (M))|F} 1.9933 + + 91 + 1 2.101 52178.6 1.0 3745 4324 8069 SUDHL4_400M_050219_1,8071 SUDHL4_400M_050219_1,8071,TMADQIVTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8072 42.993 29.0 1840000.0 25 0 484790.0 37867 TLVPTPAL 8 47 406.2484267149688 810.4823004967376 2 406.2480651736259 MULTI CID FTMS 0 0 0 8069 2255670.5 0.2897709466687692 -2 0.2738914489746094 3 Unmodified _TLVPTPAL_ ENSG00000186838|ENST00000335426|SELENOV 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.101 49096.7 1.0 3746 4324 8069 SUDHL4_400M_050219_1,8072 SUDHL4_400M_050219_1,8072,TLVPTPAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8073 42.994 46.0 1294100.0 25 0 233910.0 + 14886 ILLDNDHYAM 10 76 602.7866447947414 1203.5587366562827 2 602.7867309451103 MULTI CID FTMS 0 0 0 8069 1068752.0 0.6777580977276201 -2 0.2738914489746094 4 Unmodified _ILLDNDHYAM_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 26.268140514670165 0.3785003716575977 5 {I|L}{I|L}[YG]{I|L}DND 8 6 56.407 0.0 0.0 4.6867 0.0 0.0 0.0 297.09836755924067 297.09836755924067 36.57435363544131 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3054621874040891 0.0 {I|L}{I|L}[YG]{I|L}DND 4.6867 - 393 + 1 2.101 47290.7 1.0 3747 4324 8069 SUDHL4_400M_050219_1,8073 SUDHL4_400M_050219_1,8073,ILLDNDHYAM False True ILLDNDHYAM 42.994108 602.78673094511 23174416.0 8069.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 6.653161366780599 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8074 42.996 60.0 1184000.0 25 0 274550.0 + 11593 GKPSLLLT 8 71 414.7619623051592 827.5093716771185 2 414.7613708376884 MULTI CID FTMS 0 0 0 8069 950154.4375 0.2824706088794027 -3 0.4089012145996094 5 Unmodified _GKPSLLLT_ REV__ENSG00000185522|ENST00000329451|LMNTD2;REV__ENST00000469990.1_1_11:555480-556365:-|nuORF 0.6903765706972694 0.8201419426409876 5 P 1 -1 1.5938 0.0 0.0 0.1926 0.0 0.0 607.3774879874685 120.05082117252186 727.4283091599904 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.1926 + + 1 + 1 2.101 61803.6 1.0 3748 4324 8069 SUDHL4_400M_050219_1,8074 SUDHL4_400M_050219_1,8074,GKPSLLLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8075 42.998 125.0 544820.0 25 0 37031.0 + 18186 KVADPVVTF 9 88 488.2800793340107 974.5456057348214 2 488.2784301638603 MULTI CID FTMS 0 0 0 8069 363180.0 1.0 0 0.0 6 Unmodified _KVADPVVTF_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000586276.5_1_17:42931463-42937758:-|nuORF;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;ENST00000590977.5_1_17:42931463-42936567:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 21.53697664764585 0.2571576504437394 5 {[TV]|[{I|L}S]}VNPVVT{M(Oxidation (M))|F} 9 3 + 49.543 0.0 0.0 5.0837 5.0837 79.747 0.0 0.0 0.0 13.748162098248995 32.55326554173664 13.748162098248995 1.7609125905568137 0 0.8935078169319297 1.3010299956639813 0.3494850021680094 0.0 {[TV]|[{I|L}S]}VNPVVT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}VNVPVT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}VGGPVVT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}VGGVPVT{M(Oxidation (M))|F};[VP]DAVKVT{M(Oxidation (M))|F};[VP]DAKVVT{M(Oxidation (M))|F};[VG][EP]VKVT{M(Oxidation (M))|F};[VG][EP]KVVT{M(Oxidation (M))|F};[VP]V{[DA]|[EG]}KVT{M(Oxidation (M))|F};[VP]V{[QS]|[NT]}VVT{M(Oxidation (M))|F} 5.0837;4.903;4.1388;3.9581;2.9782;2.8969;2.5916;2.5103;2.1615;2.0803 -;-;-;-;-;-;-;-;-;- 274 1 2.101 56581.6 1.0 3749 4324 8069 SUDHL4_400M_050219_1,8075 SUDHL4_400M_050219_1,8075,KVADPVVTF False True KVADPVVTF 42.998169 488.27843016386 2956372.75 8069.0 ENST00000590977.5_1_17:42931463-42936567:-|nuORF;;ENST00000586276.5_1_17:42931463-42937758:-|nuORF;;nc|ENSG00000108883|Q15029-3|EFTUD2;;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 4.572522163391113 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8076 43.002 210.0 646010.0 25 0 135560.0 37869 TLVQKVVSPY 10 116 567.3298300720465 1132.645107210893 2 567.3301269412041 MULTI CID FTMS 0 0 0 8069 311850.3125 0.2309502564121078 -21 1.2728500366210938 7 Unmodified _TLVQKVVSPY_ ENSG00000186654|ENST00000336985|PRR5;ENST00000455389.3_1_22:45126703-45133124:+|nuORF;ENST00000495017.5_1_22:45127230-45133124:+|nuORF;nc|ENSG00000186654|P85299-2|PRR5;nc|ENSG00000186654|P85299-3|PRR5;nc|ENSG00000186654|P85299-4|PRR5;nc|ENSG00000186654|P85299-5|PRR5 1.844237919475145 0.7181058121064529 5 Y 1 9 10.596 0.0 0.0 0.9355 0.0 0.0 951.5711001081572 0.0 951.5711001081572 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.9355 + + 18 + 1 2.101 105990.3 1.0 3750 4324 8069 SUDHL4_400M_050219_1,8076 SUDHL4_400M_050219_1,8076,TLVQKVVSPY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8077 43.007 284.0 292140.0 25 0 85432.0 + 37729 TLQLLLPI 8 85 455.8011432143946 909.5877334955892 2 455.8004333376884 MULTI CID FTMS 0 0 0 8069 216589.359375 0.3276487804278477 -2 0.2738914489746094 8 Unmodified _TLQLLLPI_ REV__ENSG00000103226|ENST00000399336|NOMO3;REV__ENSG00000103512|ENST00000287667|NOMO1;REV__ENSG00000185164|ENST00000622306|NOMO2;REV__ENST00000566823.1_1_16:14982940-14989499:+|nuORF;REV__ENST00000570346.1_2_16:16387929-16388153:+|nuORF;REV__ENST00000573635.1_1_16:16381587-16388153:+|nuORF;REV__nc|ENSG00000185164|Q5JPE7-3|NOMO2;REV__nc|ENSG00000185164|Q5JPE7|NOMO2 5.230669730166228 0.792582437072536 5 V 1 -1 9.6041 0.0 0.0 1.0559 0.0 0.0 792.5082408581854 0.0 792.5082408581854 0.0 0.5133117094857376 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0559 - 11 + 1 2.101 68043.9 1.0 3751 4324 8069 SUDHL4_400M_050219_1,8077 SUDHL4_400M_050219_1,8077,TLQLLLPI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8078 43.021 800.0 137870.0 25 0 16542.0 17496 KPGRHSVRIT 10 151 575.8430149974589 1149.6714770617175 2 575.8426391482353 MULTI CID FTMS 0 0 0 8069 101523.9296875 0.2332490649261734 -21 1.2728500366210938 9 Unmodified _KPGRHSVRIT_ ENST00000585917.5_1_19:28284461-28284521:+|nuORF 3.2813086475875832 0.7114585191678878 5 Y 1 10 10.969 0.0 0.0 0.95411 0.0 0.0 968.5969511601536 0.0 968.5969511601536 0.0 1.9347231218528729 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.95411 - 95 + 1 2.101 88700.9 0.6100000143051147 3752 4324 8069 SUDHL4_400M_050219_1,8078 SUDHL4_400M_050219_1,8078,KPGRHSVRIT False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8079 43.035 800.0 167270.0 25 0 9345.5 -1 MYFWKRFCFWK 11 138 857.9018957379758 1713.7892385427515 2 858.4041625857353 MULTI CID FTMS 0 0 0 8069 90622.140625 0.0507145325994207 -19 1.0649871826171875 10 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 5 [MN]PN{I|L}NADQSAG{[QN]|[E{I|L}]|[KN]}{I|L}Q 16 -1 + 88.457 0.0 0.0 5.1615 5.1615 84.86 0.0 0.0 0.0 21.382805414149782 12.50875204282059 12.50875204282059 6.709412807357751 0 0.3494850021680094 1.5228787452803376 0.3494850021680094 1.1549471895720984 [MN]PN{I|L}NADQSAG{[QN]|[E{I|L}]|[KN]}{I|L}Q;[MN]PN{I|L}NADQSQ{[QN]|[E{I|L}]|[KN]}{I|L}Q;[MN]PN{I|L}NWQSAG{[QN]|[E{I|L}]|[KN]}{I|L}Q;[MN]PN{I|L}GGADQSAG{[QN]|[E{I|L}]|[KN]}{I|L}Q;[MN]PGG{I|L}NADQSAG{[QN]|[E{I|L}]|[KN]}{I|L}Q;[MN]PN{I|L}NAD[AG]SAG{[QN]|[E{I|L}]|[KN]}{I|L}Q;[MN]PN{I|L}NA{[QS]|[NT]}DAG{[QN]|[E{I|L}]|[KN]}{I|L}Q;[MN]PN{I|L}NWQSQ{[QN]|[E{I|L}]|[KN]}{I|L}Q;[MN]PN{I|L}GGWQSAG{[QN]|[E{I|L}]|[KN]}{I|L}Q;[MN]PN{I|L}NW[AG]SAG{[QN]|[E{I|L}]|[KN]}{I|L}Q 5.1615;4.77;4.77;4.6355;4.6355;4.6355;4.5943;4.3796;4.243;4.243 -;-;-;-;-;-;-;-;-;- 5174 + 1 2.101 95736.1 0.6700000166893005 3753 4324 8069 SUDHL4_400M_050219_1,8079 SUDHL4_400M_050219_1,8079,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8080 43.039 235.0 222740.0 25 0 18282.0 + 33998 SLIQAGQQF 9 98 496.2635995282593 990.5126461233184 2 496.2635681033134 MULTI CID FTMS 0 0 0 8069 151510.09375 1.0 0 0.0 11 Unmodified _SLIQAGQQF_ ENSG00000104969|ENST00000221566|SGTA;ENSG00000197860|ENST00000381007|SGTB 30.63653989081413 0.1413794767160703 5 {[TV]|[{I|L}S]}{I|L}QA 5 4 30.662 0.0 0.0 3.0956 0.0 0.0 0.0 475.19536031693104 475.19536031693104 14.463950151760656 0.0 0.0 0.0 0 0.0 2.0 0.0 0.5 + {[TV]|[{I|L}S]}{I|L}QA 3.0956 + + 215 1 2.101 47783.1 1.0 3754 4324 8069 SUDHL4_400M_050219_1,8080 SUDHL4_400M_050219_1,8080,SLIQAGQQF False True SLIQAGQQF 43.039458 496.263568103313 648044.8125 8069.0 ENSG00000197860|ENST00000381007|SGTB;;ENSG00000104969|ENST00000221566|SGTA 5.1775898933410645 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8082 43.044 82.0 646640.0 25 0 102990.0 + 14098 IAQIHRGG 8 85 426.2460556039864 850.4775582747728 2 426.2455627322197 MULTI CID FTMS 0 0 0 8081 517210.90625 0.3464730265266166 2 -0.1199951171875 1 Unmodified _IAQIHRGG_ REV__ENSG00000166391|ENST00000198801|MOGAT2;REV__nc|ENSG00000166391|Q3SYC2-3|MOGAT2 0.6903765706972694 0.8201419426409876 5 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.36438 0.0 0.0 443.2744770753572 257.10447107486567 700.3789481502229 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.36438 - 2 + 1 2.101 47216.6 1.0 3755 4325 8081 SUDHL4_400M_050219_1,8082 SUDHL4_400M_050219_1,8082,IAQIHRGG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8083 43.046 68.0 908960.0 25 0 50627.0 + 31314 RMFDGKFVV 9 94 549.7916931890376 1097.568833444875 2 549.7916747927666 MULTI CID FTMS 0 0 0 8081 583953.9375 0.7047050085896469 1 -0.0649909973144531 2 Unmodified _RMFDGKFVV_ ENSG00000152332|ENST00000489294|UHMK1;nc|ENSG00000152332|Q8TAS1-3|UHMK1 24.99096001346401 0.2132109383330889 5 [{M(Oxidation (M))|F}V]{[MG]|[TS]}DGK{M(Oxidation (M))|F}VV 10 3 + 52.781 0.0 0.0 4.8089 4.8089 90.356 0.0 0.0 0.0 0.9936247538460988 42.402099126472784 0.9936247538460988 52.780702696163374 0 0.5891368308784531 1.0457574905606752 0.5 0.3807196863200844 [{M(Oxidation (M))|F}V]{[MG]|[TS]}DGK{M(Oxidation (M))|F}VV 4.8089 - 178 1 2.101 53358.6 1.0 3756 4325 8081 SUDHL4_400M_050219_1,8083 SUDHL4_400M_050219_1,8083,RMFDGKFVV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8084 43.049 151.0 574500.0 25 0 51030.0 + 33855 SLEVGLELL 9 111 486.7827009676734 971.5508490021468 2 486.7833129763603 MULTI CID FTMS 0 0 0 8081 300189.96875 0.6624614800023585 -3 0.3294830322265625 3 Unmodified _SLEVGLELL_ REV__ENSG00000178028|ENST00000372289|DMAP1;REV__ENST00000494092.1_1_1:44685134-44686104:+|nuORF 16.942295170755138 0.3780752226737986 5 {[TV]|[{I|L}S]}AVAQA 7 -1 27.603 0.0 0.0 2.8412 0.0 0.0 0.0 328.1712463012281 328.1712463012281 15.613744833832762 0.0 0.0 0.0 0 0.5 2.0 0.3252574989159953 0.0 {[TV]|[{I|L}S]}AVAQA 2.8412 - 174 1 2.101 68735.5 1.0 3757 4325 8081 SUDHL4_400M_050219_1,8084 SUDHL4_400M_050219_1,8084,SLEVGLELL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8085 43.052 182.0 434300.0 25 0 61395.0 31659 RRGQVGPV 8 99 434.75982721881184 867.5051015044237 2 434.7586852908134 MULTI CID FTMS 0 0 0 8081 264540.375 0.3232996647347266 2 -0.1199951171875 4 Unmodified _RRGQVGPV_ ENST00000462875.1_1_6:31609004-31609235:-|nuORF 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.101 66405.2 1.0 3758 4325 8081 SUDHL4_400M_050219_1,8085 SUDHL4_400M_050219_1,8085,RRGQVGPV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8086 43.062 572.0 286350.0 25 0 17251.0 + 16965 KIPTPIVGV 9 170 462.2997101364253 922.5848673396506 2 462.2997619509697 MULTI CID FTMS 0 0 0 8081 165797.09375 0.7121142752986802 -1 0.0555915832519531 5 Unmodified _KIPTPIVGV_ ENSG00000090060|ENST00000216277|PAPOLA 56.17704186161178 0.0281986971544335 5 [{I|L}P][TP]K{I|L}V[VG] 9 2 + 42.053 0.0 0.0 4.5581 4.5581 75.862 0.0 0.0 0.0 0.0098117762147609 17.49233998770457 0.0098117762147609 0.0257498915995313 0 0.9247425010840048 1.3010299956639813 0.6203715150305281 0.0 [{I|L}P][TP]K{I|L}V[VG];[{I|L}P][KT]P{I|L}V[VG];[K{I|L}][TP]P{I|L}V[VG];[{I|L}P]VA[VG]{I|L}V[VG];[{I|L}P]VG{[VA]|[{I|L}G]}{I|L}V[VG];[TP][{I|L}P]K{I|L}V[VG];[TP][K{I|L}]P{I|L}V[VG];[VG][{I|L}P]{[VA]|[{I|L}G]}{I|L}V[VG];[K{I|L}][TP]P{I|L}VGV;[{I|L}P]VA[K{I|L}]V[PS] 4.5581;4.5553;3.2572;3.0977;2.9068;2.7478;2.745;2.0442;2.018;1.9045 -;-;+;-;-;-;-;-;+;- + 290 1 2.101 127150.7 1.0 3759 4325 8081 SUDHL4_400M_050219_1,8086 SUDHL4_400M_050219_1,8086,KIPTPIVGV True True KIPTPIVGV 43.062198 462.29976195097 1490343.875 8081.0 ENSG00000090060|ENST00000216277|PAPOLA 5.727621396382649 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8087 43.066 213.0 231970.0 25 0 30261.0 + 31237 RLSVPLDPPL 10 91 553.8301807015122 1105.6458084698245 2 553.8300659060478 MULTI CID FTMS 0 0 0 8081 161284.828125 0.4115309104606429 3 -0.2024154663085937 6 Unmodified _RLSVPLDPPL_ REV__ENST00000554736.5_1_14:52328042-52344361:+|nuORF 3.944395688203298 0.708391353636983 5 {I|L} 1 -1 11.109 0.0 0.0 1.0048 0.0 0.0 974.550713720604 0.0 974.550713720604 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0048 + + 36 + 1 2.101 42880.1 1.0 3760 4325 8081 SUDHL4_400M_050219_1,8087 SUDHL4_400M_050219_1,8087,RLSVPLDPPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8088 43.075 470.0 272770.0 25 0 41600.0 17047 KKTTAIIA 8 146 423.2745319033288 844.5345108734576 2 423.2740051150322 MULTI CID FTMS 0 0 0 8081 131841.8125 0.3499762669633973 -1 0.0555915832519531 7 Unmodified _KKTTAIIA_ ENSG00000152061|ENST00000681986|RABGAP1L;ENST00000469553.6_1_1:174927262-174959135:+|nuORF;nc|ENSG00000152061|B7ZAP0|RABGAP1L;nc|ENSG00000152061|Q5R372-5|RABGAP1L;nc|ENSG00000152061|Q5R372-6|RABGAP1L;nc|ENSG00000152061|Q5R372-7|RABGAP1L;nc|ENSG00000152061|Q5R372-8|RABGAP1L 0.7936320650641473 0.8195151834710337 5 {I|L} 1 7 11.594 0.0 0.0 1.3728 0.0 0.0 713.4394466418155 0.0 713.4394466418155 0.0 2.921656121837655 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3728 + + 24 + 1 2.101 100836.4 1.0 3761 4325 8081 SUDHL4_400M_050219_1,8088 SUDHL4_400M_050219_1,8088,KKTTAIIA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8089 43.079 219.0 211430.0 25 0 18548.0 + 37182 TIEKLNIN 8 87 472.7733655758984 943.5321782185968 2 472.7734252810478 MULTI CID FTMS 0 0 0 8081 131284.171875 0.2894642192360506 2 -0.1199951171875 8 Unmodified _TIEKLNIN_ REV__ENSG00000139324|ENST00000266712|TMTC3;REV__nc|ENSG00000139324|Q6ZXV5|TMTC3 11.640296217721598 0.738950129755968 5 [{I|L}T]D 3 -1 30.942 0.0 0.0 3.2794 0.0 0.0 0.0 611.3513365040061 611.3513365040061 18.57332496431269 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}T]D 3.2794 - 60 1 2.101 42178.6 1.0 3762 4325 8081 SUDHL4_400M_050219_1,8089 SUDHL4_400M_050219_1,8089,TIEKLNIN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8090 43.086 408.0 304310.0 25 0 36023.0 38981 TVQAGLPL 8 156 399.7381739382655 0 399.7381774783134 PEAK CID FTMS 0 0 0 8081 129565.53125 0.3243190242058672 -2 0.1567535400390625 9 Unmodified _TVQAGLPL_ ENSG00000142185|ENST00000397928|TRPM2 2.302733041254933 0.5920993303473642 5 N 1 8 1.2591 0.0 0.0 0.15788 0.0 0.0 507.312333128681 173.08230005435783 680.3946331830389 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.15788 - 1 + 1 2.101 99112.8 1.0 3763 4325 8081 SUDHL4_400M_050219_1,8090 SUDHL4_400M_050219_1,8090,TVQAGLPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8091 43.1 800.0 244270.0 25 0 21120.0 + 40732 VLIDHDVDL 9 186 519.7772888101165 0 519.7772094607353 PEAK CID FTMS 0 0 0 8081 129493.8515625 0.7739977546648701 -1 0.0555915832519531 10 Unmodified _VLIDHDVDL_ ENSG00000119487|ENST00000265960|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-5|MAPKAP1;nc|ENSG00000119487|Q9BPZ7-6|MAPKAP1 70.33199760932243 0.0162606847128886 5 V{I|L}DV{I|L}D 6 5 32.925 0.0 0.0 3.1733 0.0 0.0 131.09491438395452 249.0633791559204 380.1582935398749 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.6307196863200843 0.0 V{I|L}DV{I|L}D 3.1733 - 974 + 1 2.101 152964.2 0.5899999737739563 3764 4325 8081 SUDHL4_400M_050219_1,8091 SUDHL4_400M_050219_1,8091,VLIDHDVDL True True VLIDHDVDL 43.099812 519.777209460735 942059.625 8081.0 nc|ENSG00000119487|Q9BPZ7-2|MAPKAP1;;ENSG00000119487|ENST00000265960|MAPKAP1;;nc|ENSG00000119487|Q9BPZ7-6|MAPKAP1;;nc|ENSG00000119487|Q9BPZ7-5|MAPKAP1;;nc|ENSG00000119487|Q9BPZ7-3|MAPKAP1 5.276240984598796 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8092 43.104 251.0 248440.0 25 0 34231.0 + 11508 GILSVDPLH 9 95 475.76951012667286 949.5244673201456 2 475.7707702517509 MULTI CID FTMS 0 0 0 8081 104536.875 1.0 0 0.0 11 Unmodified _GILSVDPLH_ REV__ENSG00000095066|ENST00000397668|HOOK2;REV__nc|ENSG00000095066|Q96ED9-2|HOOK2 16.942295170755138 0.3780752226737986 5 {[VA]|[{I|L}G]}{I|L}ETH[PA]{I|L} 9 -1 + 40.6 0.0 0.0 4.2759 4.2759 77.754 0.0 0.0 0.0 24.45953460565217 0.2456819149073652 0.2456819149073652 2.060544824331238 0 0.3494850021680094 1.6989700043360187 0.3494850021680094 0.0 {[VA]|[{I|L}G]}{I|L}ETH[PA]{I|L};{[VA]|[{I|L}G]}{I|L}[VS]{I|L}{M(Oxidation (M))|F}AM;{[VA]|[{I|L}G]}Y[TP]P[R{M(Oxidation (M))|F}];{[VA]|[{I|L}G]}{I|L}E[VS]HPV;{[VA]|[{I|L}G]}{I|L}[{M(Oxidation (M))|F}T]P[R{M(Oxidation (M))|F}];{[VA]|[{I|L}G]}{I|L}ET[YR]V;{[VA]|[{I|L}G]}{I|L}[{M(Oxidation (M))|F}T]VVAM;{[VA]|[{I|L}G]}Y[TP][R{I|L}]M;{[VA]|[{I|L}G]}{I|L}[VS]{I|L}{M(Oxidation (M))|F}CV;{[VA]|[{I|L}G]}{I|L}[{M(Oxidation (M))|F}T][R{I|L}]M 4.2759;4.0588;3.8039;3.6741;3.6454;3.3869;3.3227;3.3015;3.2791;3.1429 -;-;-;-;-;-;-;-;-;- 411 + 1 2.101 52798.5 1.0 3765 4325 8081 SUDHL4_400M_050219_1,8092 SUDHL4_400M_050219_1,8092,GILSVDPLH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8094 43.11 148.0 473620.0 25 0 42736.0 + 40456 VILPTVHEV 9 82 503.7998864018457 1005.5852198704914 2 503.7997314333916 MULTI CID FTMS 0 0 0 8093 274561.625 0.2425068832869663 3 -0.2114524841308593 1 Unmodified _VILPTVHEV_ ENSG00000174839|ENST00000311128|DENND6A;ENST00000487662.1_1_3:57643405-57651906:-|nuORF 34.10243960390752 0.1078313939113124 5 [{I|L}V]{I|L}PTVE[HV] 9 2 + 51.003 0.0 0.0 5.072 5.072 82.207 0.0 0.0 0.0 36.0649218306807 2.922152515121219 2.922152515121219 3.853508813640176 0 0.4247425010840047 2.0 0.7302046884880937 0.0 [{I|L}V]{I|L}PTVE[HV];[{I|L}V]{I|L}PTV[HD]{I|L};[{I|L}V][{M(Oxidation (M))|F}V][RH][HV] 5.072;4.6888;1.1874 -;-;- 198 + 1 2.101 58470.9 1.0 3766 4326 8093 SUDHL4_400M_050219_1,8094 SUDHL4_400M_050219_1,8094,VILPTVHEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8095 43.124 800.0 193800.0 25 0 33599.0 + 2752 ATLILLMTVLG 11 146 572.8564643851616 1143.6983758371232 2 572.8564330935478 MULTI CID FTMS 0 0 0 8093 192282.859375 0.7406148941909341 2 -0.1374244689941406 2 Unmodified _ATLILLMTVLG_ REV__ENSG00000110436|ENST00000278379|SLC1A2;REV__ENST00000479543.1_3_11:35283254-35308332:-|nuORF;REV__nc|ENSG00000110436|P43004-2|SLC1A2;REV__nc|ENSG00000110436|P43004-3|SLC1A2 12.240655878213236 0.7805268987462184 5 ED{M(Oxidation (M))|F}YEK{I|L} 7 -1 27.42 0.0 0.0 2.3975 0.0 0.0 201.26186568262943 0.0 201.26186568262943 0.0 -2.1102504669476296 -2.1102504669476296 0.0 0 0.0 0.0 0.3494850021680094 0.3807196863200844 ED{M(Oxidation (M))|F}YEK{I|L} 2.3975 - 902 + 1 2.101 122469.3 0.8100000023841858 3767 4326 8093 SUDHL4_400M_050219_1,8095 SUDHL4_400M_050219_1,8095,ATLILLMTVLG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8096 43.126 97.0 909870.0 25 0 191060.0 28677 PVPPSTAL 8 91 391.2247372639104 780.4349215946207 2 391.2247802615166 MULTI CID FTMS 0 0 0 8093 514667.15625 0.8573269789028842 -1 0.0649909973144531 3 Unmodified _PVPPSTAL_ ENSG00000169194|ENST00000304506|IL13;REV__chr5:78766864-78767842|26|11.38|0.08|7.17|-|2|LHFPL2,LHFPL2|1 2.577480529830294 0.808687252328423 5 {M(Oxidation (M))|F} 1 8 5.7969 0.0 0.0 0.74278 0.0 0.0 390.2471853665666 240.12346826724848 630.3706536338151 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.74278 - 15 + 1 2.101 72942.9 1.0 3768 4326 8093 SUDHL4_400M_050219_1,8096 SUDHL4_400M_050219_1,8096,PVPPSTAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8097 43.129 158.0 404390.0 25 0 49502.0 -1 0 85 893.9126159111856 1785.8106788891712 2 894.4150878787041 MULTI CID FTMS 0 0 0 8093 282457.46875 1.0 0 0.0 4 5 [MN][{I|L}P]{I|L}NE 7 -1 35.718 0.0 0.0 2.0001 0.0 0.0 0.0 971.4458101861936 971.4458101861936 5.919241470731151 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.0 [MN][{I|L}P]{I|L}NE 2.0001 - 750 + 1 2.101 49389.0 1.0 3769 4326 8093 SUDHL4_400M_050219_1,8097 SUDHL4_400M_050219_1,8097, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8098 43.136 433.0 252940.0 25 0 34171.0 + 20363 LLGKRGGR 8 103 428.777845964114 855.541138995028 2 428.7772399783134 MULTI CID FTMS 0 0 0 8093 215949.296875 0.9283215707578828 -1 0.0649909973144531 5 Unmodified _LLGKRGGR_ REV__ENSG00000136709|ENST00000322313|WDR33 0.6903765706972694 0.8201419426409876 5 V 1 -1 8.9794 0.0 0.0 1.0496 0.0 0.0 738.4617150221749 0.0 738.4617150221749 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0496 - 8 + 1 2.101 89831.4 1.0 3770 4326 8093 SUDHL4_400M_050219_1,8098 SUDHL4_400M_050219_1,8098,LLGKRGGR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8099 43.14 167.0 244640.0 25 0 24149.0 + 27802 PLPQPDTTV 9 81 484.2577318175543 966.5009107019088 2 484.2574035525322 MULTI CID FTMS 0 0 0 8093 146614.71875 0.6651080706288831 -1 0.0649909973144531 6 Unmodified _PLPQPDTTV_ REV__ENST00000380359.3_1_10:5493865-5494450:+|nuORF 13.50788311687929 0.4710407108020397 5 YCTV 4 -1 24.179 0.0 0.0 2.5017 0.0 0.0 482.3079613384305 0.0 482.3079613384305 0.0 10.199222480373074 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 YCTV 2.5017 - 71 + 1 2.101 38933.9 1.0 3771 4326 8093 SUDHL4_400M_050219_1,8099 SUDHL4_400M_050219_1,8099,PLPQPDTTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8100 43.154 800.0 204140.0 25 0 27696.0 -1 0 131 867.4070624541464 1732.7995719750927 2 867.4020263552666 MULTI CID FTMS 0 0 0 8093 119399.84375 0.0108875581627978 23 -0.7768974304199219 7 5 [MN]PN{I|L}DAM[YR]AA[PA]AQ 16 -1 + 71.1 0.0 0.0 4.1032 4.1032 79.884 0.0 0.0 0.0 28.070531607380573 5.530389544337169 5.530389544337169 4.403026066317395 0 0.25 1.5228787452803376 0.0 1.6184151806525389 [MN]PN{I|L}DAM[YR]AA[PA]AQ;[MN]PN{I|L}DAD[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]PN{I|L}WM[YR]AA[PA]AQ;[MN]PNNNW[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]PN{I|L}WD[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]PN{I|L}DW[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]PN{I|L}WM[Q{I|L}][WC(Carbamidomethyl (C))]{I|L}Q;[NP]{I|L}NM[RH]DA[RH]E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NM[RH]D[HN]{I|L}E{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NM[RH]DANN{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.1032;3.8491;3.716;3.4775;3.4643;3.4643;2.8661;2.6971;2.6971;2.4464 -;-;-;-;-;-;-;-;-;- 4470 + 1 2.101 112712.7 0.7200000286102295 3772 4326 8093 SUDHL4_400M_050219_1,8100 SUDHL4_400M_050219_1,8100, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8101 43.159 319.0 238170.0 25 0 24390.0 + 20552 LLMDRVDEM 9 97 561.2694989741457 1120.5244450150913 2 561.2703124880791 MULTI CID FTMS 0 0 0 8093 110200.4609375 1.0 0 0.0 8 Unmodified _LLMDRVDEM_ ENSG00000147677|ENST00000521861|EIF3H 26.268140514670165 0.1969607489560049 5 {I|L}{I|L}MD 4 5 58.488 0.0 0.0 5.2197 0.0 0.0 0.0 645.2667330377561 645.2667330377561 45.38872836444014 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + {I|L}{I|L}MD 5.2197 + + 51 + 1 2.101 62950.5 1.0 3773 4326 8093 SUDHL4_400M_050219_1,8101 SUDHL4_400M_050219_1,8101,LLMDRVDEM False True LLMDRVDEM 43.159411 561.270312488079 722292.9375 8093.0 ENSG00000147677|ENST00000521861|EIF3H 5.961854298909505 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8103 43.164 9.6 6485800.0 25 0 554340.0 + 26189 NQFPGFKEV 9 83 533.2715420158133 1064.5285310984266 2 533.2718994021416 MULTI CID FTMS 0 0 0 8102 5535081.0 0.9841322334327496 1 -0.0824203491210937 1 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 32.78568957990786 0.1150597335874693 5 SK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 7 7 39.614 0.0 0.0 3.7213 0.0 0.0 214.10779006172032 0.0 214.10779006172032 0.0 21.01751370699929 0.0 0.0 0 1.0 0.0 0.805462187404089 0.0 SK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 3.7213 - 320 1 2.092 53313.1 1.0 3774 4327 8102 SUDHL4_400M_050219_1,8103 SUDHL4_400M_050219_1,8103,NQFPGFKEV True True NQFPGFKEV 43.164026 533.271899402142 276343520.0 8102.0 ENSG00000125870|ENST00000246071|SNRPB2;;ENST00000407763.2_1_6:149433147-149433330:-|nuORF;;ENSG00000077312|ENST00000243563|SNRPA 8.00830109914144 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8104 43.165 33.0 1458000.0 25 0 270350.0 + 36239 SYAIYVRK 8 64 500.2828222497244 998.5510915662488 2 500.2827331423759 MULTI CID FTMS 0 0 0 8102 1412259.75 0.5840771071581262 4 -0.2229385375976562 2 Unmodified _SYAIYVRK_ REV__ENSG00000163527|ENST00000295770|STT3B;REV__ENST00000423527.5_1_3:31574490-31661461:+|nuORF;REV__ENST00000436236.1_1_3:31638325-31661336:+|nuORF;REV__ENST00000453168.5_1_3:31574490-31661308:+|nuORF 2.577480529830294 0.808687252328423 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.092 42866.0 1.0 3775 4327 8102 SUDHL4_400M_050219_1,8104 SUDHL4_400M_050219_1,8104,SYAIYVRK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8105 43.166 37.0 1475400.0 25 0 164130.0 + 31008 RLFDEPQLA 9 70 544.790495846685 1087.5664387601698 2 544.7906371951103 MULTI CID FTMS 0 0 0 8102 1108024.375 0.6022730005947858 3 -0.1881103515625 3 Unmodified _RLFDEPQLA_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1 12.240655878213236 0.5053430591993562 5 EPQ[{I|L}A] 5 4 30.273 0.0 0.0 2.7836 0.0 0.0 531.2807777718997 0.0 531.2807777718997 0.0 19.894505800513866 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 + EPQ[{I|L}A] 2.7836 + + 27 1 2.092 47788.8 1.0 3776 4327 8102 SUDHL4_400M_050219_1,8105 SUDHL4_400M_050219_1,8105,RLFDEPQLA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8106 43.168 46.0 599710.0 25 0 56768.0 45651 YVPRAVLVD 9 66 516.2961824999164 1030.5778120666328 2 516.2963134646416 MULTI CID FTMS 0 0 0 8102 1109900.5 0.6587714828465159 4 -0.2229385375976562 4 Unmodified _YVPRAVLVD_ CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000261456|ENST00000568584|TUBB8;ENST00000604929.1_1_9:140135770-140136775:+|nuORF 4.75600775471527 0.7486543447549536 5 {I|L} 1 8 10.713 0.0 0.0 1.0395 0.0 0.0 899.4827630937797 0.0 899.4827630937797 0.0 8.723637474483468 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0395 + + 10 + 1 2.092 29363.7 1.0 3777 4327 8102 SUDHL4_400M_050219_1,8106 SUDHL4_400M_050219_1,8106,YVPRAVLVD False False False False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 8107 43.17 82.0 404220.0 25 0 44961.0 16005 ITEARQLVG 9 76 493.7845596749932 985.5545664167864 2 494.2835876345634 MULTI CID FTMS 0 0 0 8102 567450.875 0.5756134697351042 4 -0.2229385375976562 5 Unmodified _ITEARQLVG_ ENSG00000214814|ENST00000522917|FER1L6 4.75600775471527 0.7486543447549536 5 {[WN]|[YH]}VV 4 8 13.188 0.0 0.0 1.3381 0.0 0.0 0.0 484.27301801299126 484.27301801299126 1.928527761275128 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[WN]|[YH]}VV 1.3381 - 31 1 2.092 34273.1 1.0 3778 4327 8102 SUDHL4_400M_050219_1,8107 SUDHL4_400M_050219_1,8107,ITEARQLVG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8108 43.171 84.0 854930.0 25 0 100430.0 + 7846 ELKVRSER 8 98 508.79696659071726 1015.5793802482344 2 508.7978088259697 MULTI CID FTMS 0 0 0 8102 484972.3125 0.67050254615412 3 -0.1881103515625 6 Unmodified _ELKVRSER_ REV__ENSG00000090857|ENST00000288050|PDPR;REV__nc|ENSG00000090857|Q8NCN5-2|PDPR 3.944395688203298 0.8003900995685364 5 {I|L} 1 -1 10.596 0.0 0.0 1.0433 0.0 0.0 884.4841329111237 0.0 884.4841329111237 0.0 7.496988247154075 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0433 + + 25 + 1 2.092 59441.3 1.0 3779 4327 8102 SUDHL4_400M_050219_1,8108 SUDHL4_400M_050219_1,8108,ELKVRSER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8109 43.174 101.0 656930.0 25 0 81612.0 + 1582 ALLERGYSL 9 97 511.2877582398325 1020.5609635464648 2 511.2875549197197 MULTI CID FTMS 0 0 0 8102 373159.84375 0.2300198099065713 -2 0.1199951171875 7 Unmodified _ALLERGYSL_ ENSG00000182199|ENST00000328923|SHMT2;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 53.40400417844725 0.0329064971918313 5 [{I|L}A]AA[KQ]GYS{I|L} 10 4 + 45.908 0.0 0.0 4.4983 4.4983 87.707 0.0 0.0 0.0 14.946049681132934 15.969100130080562 14.946049681132934 15.3342375548695 0 1.305462187404089 2.0 0.0 0.0 [{I|L}A]AA[KQ]GYS{I|L};[{I|L}V]N[KQ]GYS{I|L};[{I|L}V]GG[KQ]GYS{I|L};[{I|L}V]N[YT][W{I|L}]{I|L} 4.4983;2.9958;2.0935;0.99244 -;-;-;- 194 1 2.092 57349.4 1.0 3780 4327 8102 SUDHL4_400M_050219_1,8109 SUDHL4_400M_050219_1,8109,ALLERGYSL True True ALLERGYSL 43.173572 511.28755491972 22187892.0 8102.0 ENST00000553837.5_1_12:57625333-57628141:+|nuORF;;ENSG00000182199|ENST00000328923|SHMT2;;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;;nc|ENSG00000182199|P34897-2|SHMT2;;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;;nc|ENSG00000182199|P34897-3|SHMT2;;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 5.99400536219279 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8110 43.181 389.0 311430.0 25 0 31283.0 + 404 AEEDFYEKL 9 122 572.2643572369294 1142.5141615406587 2 572.2643310427666 MULTI CID FTMS 0 0 0 8102 217380.921875 1.0 0 0.0 8 Unmodified _AEEDFYEKL_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7 55.50274090549119 0.0285720310785888 5 {[CP]|[EA]}ED{M(Oxidation (M))|F}YEK{I|L} 9 0 {[CP]|[EA]} + + 59.219 3.7236 1.8611 5.1832 5.1832 59.75 0.0 0.0 0.0 0.0 29.46056073766469 0.0 0.0 0 1.1989700043360187 0.0 0.805462187404089 0.25 + + {[CP]|[EA]}ED{M(Oxidation (M))|F}YEK{I|L} 5.1832 + + 330 + 1 2.092 92377.9 1.0 3781 4327 8102 SUDHL4_400M_050219_1,8110 SUDHL4_400M_050219_1,8110,AEEDFYEKL True True AEEDFYEKL 43.180559 572.264331042767 3266890.25 8102.0 nc|ENSG00000166508|P33993-3|MCM7;;ENSG00000166508|ENST00000303887|MCM7 8.012750625610352 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8111 43.188 404.0 179500.0 25 0 14502.0 + 19145 LEAIIQHKK 9 120 540.3303315212723 1078.6461101093446 2 540.3301269412041 MULTI CID FTMS 0 0 0 8102 134528.6875 0.9081140853497944 2 -0.1564483642578125 9 Unmodified _LEAIIQHKK_ REV__ENSG00000122970|ENST00000242591|IFT81 7.910154910731844 0.6385446671287552 5 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]T 5 -1 21.879 0.0 0.0 2.0284 0.0 0.0 0.0 533.2730806940061 533.2730806940061 6.963663943533724 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]T 2.0284 - 93 + 1 2.092 61419.0 1.0 3782 4327 8102 SUDHL4_400M_050219_1,8111 SUDHL4_400M_050219_1,8111,LEAIIQHKK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8112 43.195 385.0 155820.0 25 0 16688.0 + 10491 FTSPSPFSSTV 11 85 578.7772002182478 1155.5398475032955 2 578.7768432497978 MULTI CID FTMS 0 0 0 8102 129303.9453125 0.262624135878963 4 -0.2229385375976562 10 Unmodified _FTSPSPFSSTV_ REV__ENSG00000166507|ENST00000309979|NDST2 17.11289562659939 0.6791789249425932 5 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F} 3 -1 25.942 0.0 0.0 2.245 0.0 0.0 0.0 759.3297823541624 759.3297823541624 7.186880186508802 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]{M(Oxidation (M))|F} 2.245 - 197 + 1 2.092 53462.4 1.0 3783 4327 8102 SUDHL4_400M_050219_1,8112 SUDHL4_400M_050219_1,8112,FTSPSPFSSTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8113 43.204 512.0 244230.0 25 0 26640.0 + 38953 TVNLSPPAM 9 142 465.2415068367712 928.4684607403424 2 465.2411071658134 MULTI CID FTMS 0 0 0 8102 112333.9921875 1.0 0 0.0 11 Unmodified _TVNLSPPAM_ REV__ENSG00000100368|ENST00000403662|CSF2RB;REV__nc|ENSG00000100368|P32927-2|CSF2RB 42.09456458481378 0.0639583784996157 5 PPAM 4 -1 22.384 0.0 0.0 2.4108 0.0 0.0 514.2742733229127 0.0 514.2742733229127 0.0 -0.0245246237655294 -0.0245246237655294 0.0 0 0.4247425010840047 0.0 0.0 0.0 PPAM 2.4108 + + 191 + 1 2.092 99385.6 1.0 3784 4327 8102 SUDHL4_400M_050219_1,8113 SUDHL4_400M_050219_1,8113,TVNLSPPAM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8114 43.218 800.0 134860.0 25 0 61730.0 -1 0 88 681.339891559054 2040.9978452773616 3 681.6737548708916 MULTI CID FTMS 0 0 0 8102 84812.7890625 0.7717474432398609 1 -0.0824203491210937 12 5 [{I|L}V]T 3 -1 33.072 0.0 0.0 1.6204 0.0 0.0 0.0 1724.7812172289853 1724.7812172289853 17.498774732165998 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.0 [{I|L}V]T 1.6204 - 402 + 1 2.092 92254.2 0.6600000262260437 3785 4327 8102 SUDHL4_400M_050219_1,8114 SUDHL4_400M_050219_1,8114, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8115 43.219 36.0 827230.0 25 0 55378.0 29390 QLAQFVHEV 9 67 535.7850502453003 0 535.7851440310478 PEAK CID FTMS 0 0 0 8102 853146.1875 0.7913020729048783 1 -0.0824203491210937 13 Unmodified _QLAQFVHEV_ ENSG00000013573|ENST00000542838|DDX11;ENST00000535158.5_1_12:31227017-31242187:+|nuORF;ENST00000536265.5_1_12:31227017-31242486:+|nuORF;ENST00000539757.1_1_12:9440801-9462940:+|nuORF;ENST00000542242.1_1_12:31240692-31242486:+|nuORF;ENST00000542244.5_1_12:31237807-31242486:+|nuORF;ENST00000543026.5_1_12:31240692-31242187:+|nuORF;nc|ENSG00000013573|Q96FC9-3|DDX11;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000013573|Q96FC9|DDX11;nc|ENSG00000214826|Q92771|DDX12P;nc|ENSG00000256263|A8MPP1|DDX11L8 10.823927491677226 0.3028200641087142 5 C(Carbamidomethyl (C))V{M(Oxidation (M))|F} 3 8 11.198 0.0 0.0 1.047 0.0 0.0 241.14198662165683 419.2065523736938 660.3485389953506 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))V{M(Oxidation (M))|F} 1.047 - 18 + 1 2.092 30484.5 1.0 3786 4327 8102 SUDHL4_400M_050219_1,8115 SUDHL4_400M_050219_1,8115,QLAQFVHEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8116 43.233 800.0 234120.0 25 0 15441.0 -1 0 146 901.4467436295386 1800.878934325877 2 901.4459106326104 MULTI CID FTMS 0 0 0 8102 191599.09375 0.8915144038594474 -1 0.0550041198730468 14 5 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADHR{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]} 15 -1 + 121.52 0.0 0.0 6.7479 6.7479 88.631 0.0 0.0 0.0 53.662669291620176 18.06454256956868 18.06454256956868 5.827483047603565 0 2.322682509756042 2.0 1.6936726795685342 2.309894379144197 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADHR{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[{I|L}T][EP]Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[DV][EP]Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[DV]K{M(Oxidation (M))|F}N{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NADHR{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGADHR{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWHR{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[{I|L}T]{M(Oxidation (M))|F}N{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW[DV][EP]Y{I|L}{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[WR]{M(Oxidation (M))|F}N{I|L}{[QS]|[NT]} 6.7479;6.4243;6.4243;6.2951;6.2465;6.2465;6.1958;6.1145;5.8712;5.7419 -;-;-;-;-;-;-;-;-;- 48595 + 1 2.092 125462.5 0.8700000047683716 3787 4327 8102 SUDHL4_400M_050219_1,8116 SUDHL4_400M_050219_1,8116, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8117 43.242 432.0 233490.0 25 0 17935.0 + 40711 VLGSTLLSTV 10 149 495.2980586737667 988.5815644143336 2 496.2945129275322 MULTI CID FTMS 0 0 0 8102 161016.6875 0.6480272495389636 -9 0.7679214477539062 15 Unmodified _VLGSTLLSTV_ REV__ENSG00000181143|ENST00000397910|MUC16 15.847184025352805 0.5816416552707754 5 [{I|L}V]{[DA]|[EG]}P 5 -1 18.186 0.0 0.0 1.8396 0.0 0.0 0.0 490.2908564280408 490.2908564280408 2.518757599674995 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.25 0.0 [{I|L}V]{[DA]|[EG]}P 1.8396 - 1393 1 2.092 82214.0 1.0 3788 4327 8102 SUDHL4_400M_050219_1,8117 SUDHL4_400M_050219_1,8117,VLGSTLLSTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8119 43.246 11.0 3469700.0 25 0 833440.0 + 31618 RRAGPALA 8 53 406.2484267149688 810.4823004967376 2 406.2484008669853 MULTI CID FTMS 0 0 0 8118 4647495.5 0.5970327539744146 2 -0.1056900024414062 1 Unmodified _RRAGPALA_ REV__ENST00000281961.2_1_2:39893203-39931290:+|nuORF 0.0 0.8243325171867699 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.087 40682.9 1.0 3789 4328 8118 SUDHL4_400M_050219_1,8119 SUDHL4_400M_050219_1,8119,RRAGPALA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8120 43.248 24.0 2100200.0 25 0 446790.0 38443 TRTRRWAV 8 74 523.303409344533 1044.5922657558658 2 523.3038818240166 MULTI CID FTMS 0 0 0 8118 1956664.75 0.6236496464596281 4 -0.1655731201171875 2 Unmodified _TRTRRWAV_ ENSG00000141161|ENST00000394570|UNC45B;nc|ENSG00000141161|Q8IWX7|UNC45B 2.302733041254933 0.8103549651115762 5 K 1 8 6.9897 0.0 0.0 0.66913 0.0 0.0 339.8101745466845 573.6467989557249 913.4569735024096 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.66913 - 1 + 1 2.087 41513.1 1.0 3790 4328 8118 SUDHL4_400M_050219_1,8120 SUDHL4_400M_050219_1,8120,TRTRRWAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8121 43.249 33.0 1586700.0 25 0 119330.0 + 24629 MLPPPPLTA 9 84 468.7643962398982 935.5142395465964 2 468.7639953494072 MULTI CID FTMS 0 0 0 8118 1690284.625 0.7932189905946639 -3 0.2024154663085937 3 Unmodified _MLPPPPLTA_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 93.88341677533236 0.0134066622201488 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPPP{I|L}TA 9 0 + 64.892 0.0 0.0 6.9366 6.9366 95.767 0.0 0.0 0.0 43.02046884880937 10.788493772929044 10.788493772929044 30.515384402724592 0 1.4291746928241125 2.0 1.4559771852360797 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPPP{I|L}TA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]P{I|L}TA;{[HG]|PP}{I|L}PPTA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}P]PPPTA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]AT{I|L}[W{I|L}]A;{[HG]|PP}{I|L}TAPP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}P][YK]TA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}P]PTAPP{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]A[{I|L}P]N{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[HG]|PP}{I|L}P[TA]P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.9366;3.6747;2.3064;1.9404;1.646;0.80925;0.71897;0.44322;0.41879;0.38388 +;-;-;-;-;-;-;-;-;- + 330 + 1 2.087 45771.1 1.0 3791 4328 8118 SUDHL4_400M_050219_1,8121 SUDHL4_400M_050219_1,8121,MLPPPPLTA True True MLPPPPLTA 43.248804 468.763995349407 85645170.0 8118.0 nc|ENSG00000105486|P18858-2|LIG1;;ENSG00000105486|ENST00000263274|LIG1;;nc|ENSG00000105486|P18858-3|LIG1 5.997734069824219 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8122 43.25 49.0 1102200.0 25 0 174990.0 9256 FHKPGLEK 8 75 478.26953280556666 954.5245126779332 2 478.2696716189384 MULTI CID FTMS 0 0 0 8118 1016710.875 0.9516917691757945 1 -0.0740280151367187 4 Unmodified _FHKPGLEK_ ENSG00000173705|ENST00000309558|SUSD5 2.577480529830294 0.808687252328423 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.087 47830.9 1.0 3792 4328 8118 SUDHL4_400M_050219_1,8122 SUDHL4_400M_050219_1,8122,FHKPGLEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8123 43.258 456.0 306600.0 25 0 47324.0 -1 0 132 396.8017597775706 791.5889666219413 2 396.8014709353447 MULTI CID FTMS 0 0 0 8118 221426.65625 0.6408210906484285 -4 0.2580070495605469 5 5 {I|L}{I|L}{I|L} 3 -1 41.191 0.0 0.0 5.2035 0.0 0.0 0.0 449.312523449925 449.312523449925 22.11758134947864 0.0 0.0 0.0 0 1.1549471895720984 0.7958800173440752 0.0 0.0 {I|L}{I|L}{I|L} 5.2035 - 59 + 1 2.087 113975.3 1.0 3793 4328 8118 SUDHL4_400M_050219_1,8123 SUDHL4_400M_050219_1,8123, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8124 43.264 338.0 226520.0 25 0 17197.0 + 13418 HLLSAISSV 9 116 463.76869394092927 925.5228349486586 2 463.7690307497978 MULTI CID FTMS 0 0 0 8118 138658.15625 1.0 0 0.0 6 Unmodified _HLLSAISSV_ ENSG00000039123|ENST00000230640|MTREX 60.38955033654506 0.025866396858536 5 [H{I|L}]{I|L}SA{I|L} 6 3 33.381 0.0 0.0 3.6068 0.0 0.0 0.0 288.11827494119694 288.11827494119694 13.21749990391008 0.0 0.0 0.0 0 0.3807196863200844 1.2218487496163564 0.7134679910804405 0.0 + [H{I|L}]{I|L}SA{I|L} 3.6068 + + 77 1 2.087 64010.1 1.0 3794 4328 8118 SUDHL4_400M_050219_1,8124 SUDHL4_400M_050219_1,8124,HLLSAISSV True True HLLSAISSV 43.264311 463.769030749798 1037477.0625 8118.0 ENSG00000039123|ENST00000230640|MTREX 6.288849353790283 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8125 43.278 800.0 173000.0 25 0 14625.0 -1 0 129 873.9145653402629 1745.8145777473258 2 874.4117919802666 MULTI CID FTMS 0 0 0 8118 136446.34375 0.1706609929277602 -5 0.3591690063476562 7 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NEAQAC(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L}Q 15 -1 + 69.001 0.0 0.0 3.9523 3.9523 77.482 0.0 0.0 0.0 4.944188742686606 4.944188742686606 4.944188742686606 2.685690803236298 0 0.6435078169319297 0.0 0.0 1.048455006504028 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NEAQAC(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NEAQR[DG]{M(Oxidation (M))|F}{I|L}Q;[MN]P[HV]RQAEN{I|L}DP[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}QDAQAC(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}QDAQR[DG]{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NEA[AG]AC(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}GGEAQAC(Carbamidomethyl (C))P{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NEG[C(Carbamidomethyl (C))N]TKN{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NEAQAH[PS]VPQ;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}NEG{[YD]|[{M(Oxidation (M))|F}M]}PKN{I|L}Q 3.9523;3.7985;3.6691;3.6075;3.4536;3.4351;3.4351;3.3911;3.3877;3.3412 -;-;-;-;-;-;-;-;-;- 12101 + 1 2.087 97961.2 0.75 3795 4328 8118 SUDHL4_400M_050219_1,8125 SUDHL4_400M_050219_1,8125, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8126 43.286 462.0 335310.0 25 0 65764.0 + 36536 TAIPLPFTTLF 11 132 610.8484797154653 1219.6824064977304 2 610.8477661013603 MULTI CID FTMS 0 0 0 8118 132488.46875 0.9003788503837243 -2 0.1374244689941406 8 Unmodified _TAIPLPFTTLF_ REV__ENSG00000067208|ENST00000684568|EVI5;REV__nc|ENSG00000067208|O60447-2|EVI5;REV__nc|ENSG00000067208|O60447|EVI5 17.11289562659939 0.6791789249425932 5 [TA]{I|L}QAA{I|L}{I|L}YEK 11 -1 + 81.758 0.0 0.0 6.7032 6.7032 90.861 0.0 0.0 0.0 57.85722016337925 17.27176395165405 17.27176395165405 9.128498242811006 0 0.3494850021680094 1.3010299956639813 0.6549471895720985 0.5752574989159953 [TA]{I|L}QAA{I|L}{I|L}YEK;[TA]{I|L}[AG]AA{I|L}{I|L}YEK;[TA]{I|L}[RN]{I|L}{I|L}YEK;[TA]{I|L}Q[RV]{I|L}YEK;[TA]{I|L}QAVVVYEK;{I|L}{I|L}AAQ[PA]AAQ{I|L}[PG];[TA]{I|L}QAA{I|L}[KG][YG]K;[TA]{I|L}[AG][RV]{I|L}YEK;[TA]{I|L}[AG]AVVVYEK;[PG]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}AAQ{I|L}[PG] 6.7032;5.9548;4.8736;4.8736;4.7198;4.5929;4.2717;4.1222;3.9714;3.8716 -;-;-;-;-;-;-;-;-;- 1444 + 1 2.087 118363.8 1.0 3796 4328 8118 SUDHL4_400M_050219_1,8126 SUDHL4_400M_050219_1,8126,TAIPLPFTTLF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8127 43.288 69.0 540020.0 25 0 62541.0 + 32012 RVIDVGSEW 9 73 530.7746637061854 1059.534774479171 2 530.7752563357353 MULTI CID FTMS 0 0 0 8118 286681.78125 0.3163453677548603 3 -0.1405181884765625 9 Unmodified _RVIDVGSEW_ ENSG00000137947|ENST00000370500|GTF2B;ENST00000494819.5_1_1:89324456-89357188:-|nuORF 12.240655878213236 0.5053430591993562 5 [MT]TSR 5 8 40.445 0.0 0.0 3.8173 0.0 0.0 0.0 480.2597779819632 480.2597779819632 15.228787452803374 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 [MT]TSR 3.8173 - 21 + 1 2.087 33353.4 1.0 3797 4328 8118 SUDHL4_400M_050219_1,8127 SUDHL4_400M_050219_1,8127,RVIDVGSEW False True RVIDVGSEW 43.288 530.775256335735 6303984.0 8118.0 ENSG00000137947|ENST00000370500|GTF2B;;ENST00000494819.5_1_1:89324456-89357188:-|nuORF 4.152977148691813 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8128 43.302 800.0 162370.0 25 0 13065.0 -1 0 110 983.1209820074782 2946.3411166226347 3 983.4557983279228 MULTI CID FTMS 0 0 0 8118 238102.9375 0.8974947211348023 -1 0.0824203491210937 10 5 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 6 -1 36.189 0.0 0.0 1.2283 0.0 0.0 0.0 2226.022488042809 2226.022488042809 16.561734207603745 0.0 0.0 0.0 0 0.5 2.0 0.3252574989159953 0.7302046884880937 [MN]P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 1.2283 - 1226 1 2.087 92938.7 0.9200000166893004 3798 4328 8118 SUDHL4_400M_050219_1,8128 SUDHL4_400M_050219_1,8128, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8129 43.316 800.0 122920.0 25 0 27356.0 -1 0 57 1197.4850887040088 3589.4334367122265 3 1197.812670886517 MULTI CID FTMS 0 0 0 8118 113444.90625 0.8794265060013307 -1 0.0824203491210937 11 5 {I|L}QV 3 -1 14.169 0.0 0.0 0.39474 0.0 0.0 2571.9142239210146 674.2861422174436 3246.2003661384583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}QV 0.39474 - 55 + 1 2.087 81236.6 0.5600000023841858 3799 4328 8118 SUDHL4_400M_050219_1,8129 SUDHL4_400M_050219_1,8129, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8131 43.32 37.0 1348600.0 25 0 344730.0 + 11594 GKPSLLLT 8 50 414.7619623051592 827.5093716771185 2 414.7617065310478 MULTI CID FTMS 0 0 0 8130 1526072.625 0.4536848396058124 2 -0.0664901733398437 1 Unmodified _GKPSLLLT_ REV__ENSG00000185522|ENST00000329451|LMNTD2;REV__ENST00000469990.1_1_11:555480-556365:-|nuORF 0.6903765706972694 0.8201419426409876 5 P 1 -1 0.3786 0.0 0.0 0.045752 0.0 0.0 629.3910530509451 98.03787409000232 727.4289271409474 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.045752 + + 2 + 1 2.087 45055.2 1.0 3800 4329 8130 SUDHL4_400M_050219_1,8131 SUDHL4_400M_050219_1,8131,GKPSLLLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8132 43.324 158.0 386300.0 25 0 63711.0 + 14887 ILLDNDHYAM 10 83 602.7866447947414 1203.5587366562827 2 602.7873412966728 MULTI CID FTMS 0 0 0 8130 336310.15625 0.2132739229928727 3 -0.0915451049804687 2 Unmodified _ILLDNDHYAM_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 26.268140514670165 0.3785003716575977 5 {I|L}{I|L}[YG]Y{I|L}D 7 7 62.791 0.0 0.0 5.2171 0.0 0.0 0.0 363.1064852350219 363.1064852350219 46.4160538476542 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {I|L}{I|L}[YG]Y{I|L}D 5.2171 - 305 + 1 2.087 47734.7 1.0 3801 4329 8130 SUDHL4_400M_050219_1,8132 SUDHL4_400M_050219_1,8132,ILLDNDHYAM False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8133 43.327 179.0 321380.0 25 0 101220.0 40636 VLDKILPL 8 74 455.8011432143946 909.5877334955892 2 455.8010436892509 MULTI CID FTMS 0 0 0 8130 310245.65625 0.4693287389402704 3 -0.0915451049804687 3 Unmodified _VLDKILPL_ ENSG00000152223|ENST00000282041|EPG5;ENST00000587974.1_1_18:43487913-43547205:-|nuORF;nc|ENSG00000152223|Q9HCE0-2|EPG5 2.302733041254933 0.8103549651115762 5 {M(Oxidation (M))|F} 1 8 10.837 0.0 0.0 1.1915 0.0 0.0 744.5084621106269 0.0 744.5084621106269 0.0 1.629267896945068 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1915 - 4 + 1 2.087 50752.4 1.0 3802 4329 8130 SUDHL4_400M_050219_1,8133 SUDHL4_400M_050219_1,8133,VLDKILPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8134 43.329 96.0 759020.0 25 0 51108.0 + -1 LVNICLAGL 9 103 486.7827009676734 971.5508490021468 2 486.7843810915947 MULTI CID FTMS 0 0 0 8130 337232.71875 0.7442076992066182 1 -0.0316619873046875 4 Carbamidomethyl (C) _LVNIC(Carbamidomethyl (C))LAGL_ REV__ENST00000499810.6_1_5:137843138-137843267:-|nuORF 13.50788311687929 0.4710407108020397 5 [{I|L}V]NP 4 -1 12.818 0.0 0.0 1.3193 0.0 0.0 0.0 545.2779662719312 545.2779662719312 0.5990429000358368 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [{I|L}V]NP 1.3193 - 115 1 2.087 61718.8 1.0 3803 4329 8130 SUDHL4_400M_050219_1,8134 SUDHL4_400M_050219_1,8134,LVNICLAGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8135 43.343 800.0 166980.0 25 0 23750.0 12332 GSRKFAKLIM 10 147 575.8430149974589 1149.6714770617175 2 575.8434326052666 MULTI CID FTMS 0 0 0 8130 165780.53125 0.3808772376724473 -16 1.0756072998046875 5 Unmodified _GSRKFAKLIM_ ENSG00000116984|ENST00000366577|MTR;nc|ENSG00000116984|Q99707-2|MTR 5.296884461304476 0.7021353017287152 5 T 1 10 10.416 0.0 0.0 0.90604 0.0 0.0 1030.6130949589815 0.0 1030.6130949589815 0.0 0.4164819298721411 0.0 0.0 0 0.0 0.0 0.1382104921644452 0.0 T 0.90604 - 73 + 1 2.087 102093.2 0.7300000190734863 3804 4329 8130 SUDHL4_400M_050219_1,8135 SUDHL4_400M_050219_1,8135,GSRKFAKLIM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8136 43.347 233.0 256900.0 25 0 29367.0 + 12265 GRAQLLGH 8 99 426.2460556039864 850.4775582747728 2 426.2462036013603 MULTI CID FTMS 0 0 0 8130 127344.2734375 0.085306313721461 6 -0.1828193664550781 6 Unmodified _GRAQLLGH_ REV__ENSG00000107789|ENST00000371996|MINPP1;REV__nc|ENSG00000107789|Q9UNW1-2|MINPP1;REV__nc|ENSG00000107789|Q9UNW1-3|MINPP1 0.7936320650641473 0.8195151834710337 5 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D 4 -1 5.6618 0.0 0.0 0.66572 0.0 0.0 0.0 325.24559961682286 325.24559961682286 3.4433502384810297 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}D 0.66572 - 12 1 2.087 50909.7 1.0 3805 4329 8130 SUDHL4_400M_050219_1,8136 SUDHL4_400M_050219_1,8136,GRAQLLGH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8138 43.358 436.0 233810.0 25 0 20663.0 + 27472 PKGEVVVA 8 135 399.7381739382655 0 399.7379943728447 PEAK CID FTMS 0 0 0 8137 124598.03125 0.3118847391209392 3 -0.1053123474121093 1 Unmodified _PKGEVVVA_ REV__ENSG00000072195|ENST00000312358|SPEG;REV__nc|ENSG00000072195|Q15772-1|SPEG 2.577480529830294 0.5910327097116076 5 Q 1 -1 2.7866 0.0 0.0 0.34943 0.0 0.0 398.2790994861029 268.09809290103755 666.3771923871404 0.0 0.0 0.0 0.0 0 0.2302046884880938 0.0 0.0 0.0 Q 0.34943 - 5 + 1 2.087 81968.4 1.0 3806 4330 8137 SUDHL4_400M_050219_1,8138 SUDHL4_400M_050219_1,8138,PKGEVVVA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8139 43.359 59.0 1227200.0 25 0 271920.0 -1 LVRMMGVAKL 10 77 567.3298300720465 1132.645107210893 2 567.3295776247978 MULTI CID FTMS 0 0 0 8137 570290.625 0.422346108994748 -15 1.0446739196777344 2 Oxidation (M) _LVRM(Oxidation (M))MGVAKL_ ENSG00000182504|ENST00000341893|CEP97;ENST00000489172.5_1_3:101443520-101477325:+|nuORF;nc|ENSG00000182504|Q8IW35-2|CEP97 3.944395688203298 0.708391353636983 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.087 60293.8 1.0 3807 4330 8137 SUDHL4_400M_050219_1,8139 SUDHL4_400M_050219_1,8139,LVRMMGVAKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8140 43.368 522.0 163330.0 25 0 21554.0 + 23241 LSTLRQILY 9 121 553.8301807015122 1105.6458084698245 2 553.8302490115166 MULTI CID FTMS 0 0 0 8137 136475.578125 0.3482281599227382 8 -0.1847648620605468 3 Unmodified _LSTLRQILY_ REV__ENST00000539080.1_1_12:122865079-122884682:-|nuORF 7.289230182591677 0.6602208344931196 5 Y 1 -1 11.783 0.0 0.0 1.0657 0.0 0.0 924.5712062743148 0.0 924.5712062743148 0.0 0.8136364874884983 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0657 + + 47 + 1 2.087 71191.4 1.0 3808 4330 8137 SUDHL4_400M_050219_1,8140 SUDHL4_400M_050219_1,8140,LSTLRQILY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8141 43.382 800.0 299680.0 25 0 11718.0 -1 MYFWKRFCFWK 11 156 857.9018957379758 1713.7892385427515 2 857.9008056521416 MULTI CID FTMS 0 0 0 8137 137126.890625 0.069954472509738 -13 0.9842185974121094 4 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 5 [MN]PN{I|L}NADQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}Q 15 -1 + 105.67 0.0 0.0 6.1661 6.1661 85.595 0.0 0.0 0.0 6.0787284689521925 6.0787284689521925 6.0787284689521925 3.9928876664371415 0 1.924742501084005 1.5228787452803376 0.8391368308784531 1.9776296993281408 [MN]PN{I|L}NADQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}Q;[MN]PN{I|L}NADQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[VP]Q;[NP]{I|L}NADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}NPA[VG];[MN]PN{I|L}NWQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}Q;[MN]PN{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}R[Y{M(Oxidation (M))|F}]{I|L}Q;[MN]PN{I|L}NWQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[VP]Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}NPA[VG];{[CA]|SS}APN{I|L}NADQ{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}Q;[NP]{I|L}GGADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}NPA[VG];[NP]{I|L}NADT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AGG{I|L}NPA[VG] 6.1661;5.9331;5.8114;5.7758;5.7576;5.5428;5.4263;5.3906;5.2864;5.2864 -;-;-;-;-;-;-;-;-;- 24076 + 1 2.087 158016.0 0.7400000095367432 3809 4330 8137 SUDHL4_400M_050219_1,8141 SUDHL4_400M_050219_1,8141,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8143 43.392 399.0 194110.0 25 0 13005.0 40764 VLKTSGKL 8 120 423.2745319033288 844.5345108734576 2 423.2747070193291 MULTI CID FTMS 0 0 0 8142 62359.296875 0.1655337826213118 5 -0.1263313293457031 1 Unmodified _VLKTSGKL_ ENSG00000256525|ENST00000539111|POLG2;ENST00000585141.5_1_17:62481823-62493086:-|nuORF 6.354104778181461 0.7857632046190106 5 PPP{I|L} 4 7 17.754 0.0 0.0 2.1022 0.0 0.0 422.2914821642764 0.0 422.2914821642764 0.0 8.421363734374792 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 PPP{I|L} 2.1022 - 83 + 1 2.087 65180.1 1.0 3810 4331 8142 SUDHL4_400M_050219_1,8143 SUDHL4_400M_050219_1,8143,VLKTSGKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8144 43.393 70.0 822620.0 25 0 137050.0 + 33641 SISGTVISLL 10 82 495.2980586737667 988.5815644143336 2 495.2990600466728 MULTI CID FTMS 0 0 0 8142 628541.0 0.4344492311190857 -4 0.2229385375976562 2 Unmodified _SISGTVISLL_ REV__ENSG00000112462|ENST00000396806|OR12D3 61.357469665136826 0.0330252915653943 5 {[TV]|[{I|L}S]}[SG]TV{I|L} 7 -1 52.708 0.0 0.0 5.3316 0.0 0.0 0.0 328.1895673393488 328.1895673393488 25.05613193342029 0.0 0.0 0.0 0 0.5 2.0 1.4731975075880328 0.0 {[TV]|[{I|L}S]}[SG]TV{I|L} 5.3316 + + 334 1 2.087 48535.7 1.0 3811 4331 8142 SUDHL4_400M_050219_1,8144 SUDHL4_400M_050219_1,8144,SISGTVISLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8145 43.403 513.0 151690.0 25 0 25659.0 + 2743 ATILVRVPLY 10 113 572.8564643851616 1143.6983758371232 2 572.8563720583916 MULTI CID FTMS 0 0 0 8142 146988.84375 0.566156168651754 7 -0.1499366760253906 3 Unmodified _ATILVRVPLY_ REV__ENSG00000110046|ENST00000377264|ATG2A;REV__nc|ENSG00000110046|Q2TAZ0-3|ATG2A 6.2057823575117 0.6979311171683138 5 [TA]{I|L}G{I|L} 5 -1 23.09 0.0 0.0 2.0189 0.0 0.0 0.0 685.3977526283919 685.3977526283919 9.595442439488108 0.0 0.0 0.0 0 0.0 0.0 0.5387254899964358 0.0 [TA]{I|L}G{I|L} 2.0189 - 254 1 2.087 63561.0 1.0 3812 4331 8142 SUDHL4_400M_050219_1,8145 SUDHL4_400M_050219_1,8145,ATILVRVPLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8146 43.407 253.0 239060.0 25 0 19955.0 + 39785 VEQKLLDV 8 100 472.2758925355876 942.5372321379753 2 472.2762939333916 MULTI CID FTMS 0 0 0 8142 91124.5078125 0.4986742563839115 -7 0.3985252380371094 4 Unmodified _VEQKLLDV_ REV__ENSG00000151812|ENST00000556826|SLC35F4;REV__nc|ENSG00000151812|A4IF30-2|SLC35F4;REV__nc|ENSG00000151812|A4IF30|SLC35F4 32.30548876998284 0.3644845974844379 5 {NN|[MP]|[D{I|L}]|[EV]}Q[K{I|L}]{I|L}[DV] 8 -1 + 36.132 0.0 0.0 3.8334 3.8334 84.429 0.0 0.0 0.0 12.319393642848482 2.218487496163561 2.218487496163561 9.262137858390812 0 0.0 1.5228787452803376 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}Q[K{I|L}]{I|L}[DV];{NN|[MP]|[D{I|L}]|[EV]}[AG][K{I|L}]{I|L}[DV];[DV]AA[K{I|L}]{I|L}[DV];[{I|L}A][DG][K{I|L}]{I|L}[DV];{[VA]|[{I|L}G]}{[DA]|[EG]}[K{I|L}]{I|L}[DV];[MT]{I|L}R{[QV]|[N{I|L}]|[RA]|[KV]}PV;{[TV]|[{I|L}S]}[Q{I|L}][VG]{I|L}[DV];[{I|L}V][QT][VG]{I|L}[DV];[{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}[VG]{I|L}[DV];[TA][PS][K{I|L}]{I|L}[DV] 3.8334;2.8508;1.7673;1.7058;1.3321;1.0146;0.85529;0.6991;0.61509;0.10968 +;-;-;-;-;-;-;-;-;- + 128 1 2.087 52687.7 1.0 3813 4331 8142 SUDHL4_400M_050219_1,8146 SUDHL4_400M_050219_1,8146,VEQKLLDV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8148 43.425 800.0 171910.0 25 0 12287.0 + 42032 VQSSIASAF 9 136 909.469743050403 908.462466583803 1 909.470751941204 MULTI CID FTMS 0 0 0 8147 205252.046875 0.9071707555815892 3 -0.0912742614746093 1 Unmodified _VQSSIASAF_ ENSG00000072818|ENST00000158762|ACAP1 61.60191391372663 0.0251951588191061 5 {[QV]|[N{I|L}]|[RA]|[KV]}SS{I|L}ASA{M(Oxidation (M))|F} 9 0 + 75.083 0.0 0.0 8.2648 8.2648 92.529 0.0 0.0 0.0 19.340905095085205 14.973024840566469 14.973024840566469 8.037275116073346 0 0.8001648626366045 1.3979400086720375 2.4247425010840047 0.2302046884880938 + + {[QV]|[N{I|L}]|[RA]|[KV]}SS{I|L}ASA{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}SS{I|L}TGA{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}SS{I|L}TQ{M(Oxidation (M))|F};{[WT]|[RM]}AVGASA{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}SATVSA{M(Oxidation (M))|F};{[WT]|[RM]}N{I|L}ASA{M(Oxidation (M))|F};{[QS]|[NT]}VS{I|L}ASA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}SAVGASA{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}ASTVSA{M(Oxidation (M))|F};[KA]DS{I|L}ASA{M(Oxidation (M))|F} 8.2648;7.3801;6.9669;6.1359;5.9745;5.8608;5.8346;5.8161;5.8137;5.7271 +;-;-;-;-;-;-;-;-;- + 5072 1 2.089 90102.2 0.7799999713897705 3814 4332 8147 SUDHL4_400M_050219_1,8148 SUDHL4_400M_050219_1,8148,VQSSIASAF True True VQSSIASAF 43.424952 909.470751941204 1932261.125 8147.0 ENSG00000072818|ENST00000158762|ACAP1 3.118285814921061 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8149 43.439 800.0 99989.0 25 0 15586.0 -1 0 91 959.1140206391332 2874.3202325176 3 959.7829467654228 MULTI CID FTMS 0 0 0 8147 102788.140625 0.8984337394565223 3 -0.0912742614746093 2 5 [MN]PR[KS][Y{M(Oxidation (M))|F}]WG 10 -1 14.499 0.0 0.0 0.50442 0.0 0.0 0.0 1604.7055834299624 1604.7055834299624 7.051368718728808 0.0 0.0 0.0 0 0.0 2.0 0.2614393726401688 0.0 [MN]PR[KS][Y{M(Oxidation (M))|F}]WG 0.50442 - 513 1 2.089 62428.6 0.6499999761581421 3815 4332 8147 SUDHL4_400M_050219_1,8149 SUDHL4_400M_050219_1,8149, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8150 43.453 800.0 70242.0 25 0 13928.0 -1 0 55 1081.1180740908474 3240.3323928727423 3 1081.452197253704 MULTI CID FTMS 0 0 0 8147 68943.03125 0.552881081900969 -8 0.4235801696777344 3 5 TV 2 -1 9.464 0.0 0.0 0.29207 0.0 0.0 2444.914498440905 592.2743013971311 3037.188799838036 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TV 0.29207 - 35 + 1 2.089 53770.4 0.5400000214576721 3816 4332 8147 SUDHL4_400M_050219_1,8150 SUDHL4_400M_050219_1,8150, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8152 43.457 18.0 3319800.0 25 0 293030.0 + 26190 NQFPGFKEV 9 82 533.2715420158133 1064.5285310984266 2 533.2722656130791 MULTI CID FTMS 0 0 0 8151 2730123.75 0.4854134535041662 7 -0.0873374938964843 1 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 36.506200033944 0.094635877243972 5 SK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 7 7 39.926 0.0 0.0 3.7506 0.0 0.0 214.10695082832189 0.0 214.10695082832189 0.0 21.012969751618083 0.0 0.0 0 1.0 0.0 0.7742275032520141 0.0 SK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 3.7506 - 231 1 2.089 50889.6 1.0 3817 4333 8151 SUDHL4_400M_050219_1,8152 SUDHL4_400M_050219_1,8152,NQFPGFKEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8153 43.459 52.0 995610.0 25 0 127060.0 + 1583 ALLERGYSL 9 79 511.2877582398325 1020.5609635464648 2 511.2879211306572 MULTI CID FTMS 0 0 0 8151 828829.6875 0.5108996864394602 4 -0.0690040588378906 2 Unmodified _ALLERGYSL_ ENSG00000182199|ENST00000328923|SHMT2;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 41.8396318013385 0.0653578398400075 5 [{I|L}A]{I|L}E 4 5 47.945 0.0 0.0 4.6979 0.0 0.0 0.0 591.2932833307249 591.2932833307249 24.44537812595911 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.75 0.0 + [{I|L}A]{I|L}E 4.6979 + + 28 + 1 2.089 47696.0 1.0 3818 4333 8151 SUDHL4_400M_050219_1,8153 SUDHL4_400M_050219_1,8153,ALLERGYSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8154 43.461 73.0 333900.0 25 0 39708.0 + 40937 VLTGLQSWK 9 52 516.2961824999164 1030.5778120666328 2 516.2959472537041 MULTI CID FTMS 0 0 0 8151 651482.125 0.3866813696671451 10 -0.1428642272949218 3 Unmodified _VLTGLQSWK_ REV__ENSG00000172940|ENST00000311856|SLC22A13;REV__nc|ENSG00000172940|Q9Y226-2|SLC22A13 4.75600775471527 0.7486543447549536 5 {I|L} 1 -1 10.089 0.0 0.0 0.97893 0.0 0.0 899.4824426592094 0.0 899.4824426592094 0.0 9.119543704721591 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.97893 + + 10 + 1 2.089 28837.6 1.0 3819 4333 8151 SUDHL4_400M_050219_1,8154 SUDHL4_400M_050219_1,8154,VLTGLQSWK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8155 43.462 64.0 682580.0 25 0 124480.0 -1 MLSILLFF 8 72 500.2828222497244 998.5510915662488 2 500.2830688357353 MULTI CID FTMS 0 0 0 8151 621181.625 0.256905973954001 10 -0.1428642272949218 4 Oxidation (M) _M(Oxidation (M))LSILLFF_ ENSG00000157514|ENST00000372383|TSC22D3 2.889219685676258 0.8067950007271085 5 {I|L} 1 -1 1.5938 0.0 0.0 0.15961 0.0 0.0 347.14485484925507 535.3009737604124 882.4458286096674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.15961 + + 4 + 1 2.089 39287.1 1.0 3820 4333 8151 SUDHL4_400M_050219_1,8155 SUDHL4_400M_050219_1,8155,MLSILLFF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8156 43.464 92.0 497350.0 25 0 61952.0 + 17049 KKVGPVYDAI 10 81 545.3170279349571 1088.619502936714 2 545.3173095583916 MULTI CID FTMS 0 0 0 8151 285051.6875 0.2259033778417677 11 -0.1653327941894531 5 Unmodified _KKVGPVYDAI_ REV__ENSG00000112394|ENST00000368851|SLC16A10 5.731851221503515 0.7001233259664787 5 Y 1 -1 10.969 0.0 0.0 1.0076 0.0 0.0 907.5448397060484 0.0 907.5448397060484 0.0 2.296962438796156 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0076 + + 32 + 1 2.089 43381.8 1.0 3821 4333 8151 SUDHL4_400M_050219_1,8156 SUDHL4_400M_050219_1,8156,KKVGPVYDAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8157 43.466 92.0 531180.0 25 0 36689.0 + 37691 TLNRQLIF 8 100 502.7961781368287 1003.5778033404574 2 502.7963744997978 MULTI CID FTMS 0 0 0 8151 235433.9375 0.1941931603175145 28 -1.4875984191894531 6 Unmodified _TLNRQLIF_ REV__ENST00000357666.8_1_19:53452950-53453265:-|nuORF 5.760428011301431 0.7893668129297577 5 [QA]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4 -1 19.085 0.0 0.0 1.9017 0.0 0.0 0.0 507.3231090868043 507.3231090868043 5.5902924611682 0.0 0.0 0.0 0 0.0 0.6020599913279624 0.0 0.6382104921644451 [QA]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.9017 - 56 1 2.089 43191.9 1.0 3822 4333 8151 SUDHL4_400M_050219_1,8157 SUDHL4_400M_050219_1,8157,TLNRQLIF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8158 43.474 454.0 250880.0 25 0 38575.0 + -1 TVTMNSFYMA 10 127 590.7540433325181 1179.493533731836 2 590.7546874880791 MULTI CID FTMS 0 0 0 8151 140835.6875 0.287329814919551 -8 0.4134178161621094 7 Oxidation (M) _TVTM(Oxidation (M))NSFYMA_ REV__ENSG00000255374|ENST00000531678|TAS2R43 13.90604991867851 0.6142120002215601 5 {[TV]|[{I|L}S]}T[HS]D 6 -1 35.093 0.0 0.0 2.9753 0.0 0.0 0.0 536.1828397223236 536.1828397223236 13.036601252696766 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.8851518780601922 0.0 {[TV]|[{I|L}S]}T[HS]D 2.9753 - 534 1 2.089 87790.7 1.0 3823 4333 8151 SUDHL4_400M_050219_1,8158 SUDHL4_400M_050219_1,8158,TVTMNSFYMA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8159 43.476 76.0 712840.0 25 0 46269.0 18367 KVPEIEVTV 9 80 507.2971508540561 1012.5797487749122 2 507.2975952029228 MULTI CID FTMS 0 0 0 8151 381162.09375 0.4913872975772806 -10 0.5701713562011719 8 Unmodified _KVPEIEVTV_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 17.11289562659939 0.3734572693229295 5 [EP]{I|L}EVKVTV 9 4 + 42.285 0.0 0.0 4.176 4.176 78.089 0.0 0.0 0.0 2.7300127206373688 7.944539621753535 2.7300127206373688 2.7300127206373688 0 0.8182503180159344 0.0 0.0 0.0 [EP]{I|L}EVKVTV;{[TV]|[{I|L}S]}[HM]VKVTV;{[QN]|[E{I|L}]|[KN]}PEVKVTV;{NN|[MP]|[D{I|L}]|[EV]}[KP]NKVTV;{[QV]|[N{I|L}]|[RA]|[KV]}[EP]NKVTV;{NN|[MP]|[D{I|L}]|[EV]}[KP]GGKVTV;{[QV]|[N{I|L}]|[RA]|[KV]}[EP]GGKVTV;[KP]{NN|[MP]|[D{I|L}]|[EV]}NKVTV;[K{I|L}][DP]NKVTV;[KP]{NN|[MP]|[D{I|L}]|[EV]}GGKVTV 4.176;3.9064;3.8126;3.5309;3.4857;2.6215;2.5763;2.1051;1.9926;1.1958 -;-;-;-;-;-;-;-;-;- 220 1 2.089 48029.5 1.0 3824 4333 8151 SUDHL4_400M_050219_1,8159 SUDHL4_400M_050219_1,8159,KVPEIEVTV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8161 43.492 800.0 166350.0 25 0 7172.7 -1 0 148 901.4467436295386 1800.878934325877 2 901.9481078982352 MULTI CID FTMS 0 0 0 8160 128724.8984375 0.7237669205821029 1 -0.0225601196289062 1 5 {[QV]|[N{I|L}]|[RA]|[KV]}[QT]WAVHDAN{I|L}DP[HA] 16 -1 + 101.96 0.0 0.0 5.6618 5.6618 79.373 0.0 0.0 0.0 1.7609125905568137 1.7609125905568137 1.7609125905568137 0.1844655354022961 0 0.9247425010840048 1.6989700043360187 2.392159058960253 1.7803695511246982 {[QV]|[N{I|L}]|[RA]|[KV]}[QT]WAVHDAN{I|L}DP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[R{M(Oxidation (M))|F}]HDAN{I|L}DP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}NP{I|L}NADH[R{M(Oxidation (M))|F}]Y{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PNAR{M(Oxidation (M))|F}HDY{I|L}HP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PN{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VHDAN{I|L}DP[HA];[NP]{I|L}NA[R{M(Oxidation (M))|F}]HDAN{I|L}DP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}P{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NVHDAN{I|L}DP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}[VS]WNVHDAN{I|L}DP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA{[{M(Oxidation (M))|F}H]|[RQ]}RDAN{I|L}DP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PRDAN{I|L}DP[HA] 5.6618;5.6516;5.564;5.484;5.4748;5.3785;5.3495;5.2959;5.2703;5.2294 -;-;-;-;-;-;-;-;-;- 45078 1 2.089 91099.5 0.7799999713897705 3825 4334 8160 SUDHL4_400M_050219_1,8161 SUDHL4_400M_050219_1,8161, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8162 43.496 212.0 332330.0 25 0 21793.0 + 41028 VMFKEPVEV 9 107 539.2858817603387 1076.5572105874774 2 539.2852050662041 MULTI CID FTMS 0 0 0 8160 215716.859375 0.6269224359460477 -8 0.3717117309570312 2 Unmodified _VMFKEPVEV_ ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000133243|Q9BX70-2|BTBD2 53.4695610476455 0.0327627608358129 5 VM{M(Oxidation (M))|F}KEPVEV 9 0 + 80.544 0.0 0.0 7.4816 7.4816 95.037 0.0 0.0 0.0 34.97302484056647 12.634279935629364 12.634279935629364 12.634279935629364 0 2.5924778212679485 2.0 0.9247425010840048 0.0 + + VM{M(Oxidation (M))|F}KEPVEV;VM{M(Oxidation (M))|F}KEPVD{I|L};VM{M(Oxidation (M))|F}V[VP]{[WT]|[RM]}V;VM[{I|L}V]VME{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};V{M(Oxidation (M))|F}VPVM{[WT]|[RM]}V;VM{M(Oxidation (M))|F}V[VP]E{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};V{M(Oxidation (M))|F}MKEPVEV;{[ET]|[MV]}{M(Oxidation (M))|F}{[SA]|[TG]}VPVEV;V{M(Oxidation (M))|F}VPVME{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EMVPVEV 7.4816;6.308;5.5241;5.2594;5.1279;4.9239;4.625;4.5314;4.5277;4.3429 +;-;-;-;-;-;-;-;-;- + 1007 + 1 2.089 59806.6 1.0 3826 4334 8160 SUDHL4_400M_050219_1,8162 SUDHL4_400M_050219_1,8162,VMFKEPVEV True True VMFKEPVEV 43.496368 539.2871 2344110.75 8160.0 ENST00000589685.2_1_19:1986489-1990887:-|nuORF;;nc|ENSG00000133243|Q9BX70-2|BTBD2;;ENSG00000133243|ENST00000255608|BTBD2 7.653944810231526 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8163 43.499 98.0 405740.0 25 0 46346.0 + 31009 RLFDEPQLA 9 62 544.790495846685 1087.5664387601698 2 544.7908813357353 MULTI CID FTMS 0 0 0 8160 264143.625 0.1435767815276933 10 -0.1420478820800781 3 Unmodified _RLFDEPQLA_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1 12.240655878213236 0.5053430591993562 5 EPQ[{I|L}A] 5 4 27.703 0.0 0.0 2.5473 0.0 0.0 531.282030174025 0.0 531.282030174025 0.0 20.71333751784365 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 + EPQ[{I|L}A] 2.5473 + + 42 1 2.089 37636.6 1.0 3827 4334 8160 SUDHL4_400M_050219_1,8163 SUDHL4_400M_050219_1,8163,RLFDEPQLA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8165 43.503 41.0 1312500.0 25 0 299250.0 38444 TRTRRWAV 8 66 523.303409344533 1044.5922657558658 2 523.3038207888603 MULTI CID FTMS 0 0 0 8164 1390604.625 0.4432287558440319 11 -0.1814918518066406 1 Unmodified _TRTRRWAV_ ENSG00000141161|ENST00000394570|UNC45B;nc|ENSG00000141161|Q8IWX7|UNC45B 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.089 46093.8 1.0 3828 4335 8164 SUDHL4_400M_050219_1,8165 SUDHL4_400M_050219_1,8165,TRTRRWAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8166 43.505 56.0 964330.0 25 0 211720.0 + 28673 PVPITTAL 8 77 406.2484267149688 810.4823004967376 2 406.2484619021416 MULTI CID FTMS 0 0 0 8164 1051205.0 0.1350412961436271 9 -0.1194877624511718 2 Unmodified _PVPITTAL_ REV__ENSG00000114859|ENST00000265593|CLCN2;REV__nc|ENSG00000114859|P51788-3|CLCN2;REV__nc|ENSG00000114859|P51788-4|CLCN2;REV__nc|ENSG00000114859|P51788-5|CLCN2 0.7936320650641473 0.8195151834710337 5 C(Carbamidomethyl (C)) 1 -1 3.0989 0.0 0.0 0.38236 0.0 0.0 518.3757463969314 129.05610071353752 647.4318471104689 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.38236 - 8 + 1 2.089 45409.4 1.0 3829 4335 8164 SUDHL4_400M_050219_1,8166 SUDHL4_400M_050219_1,8166,PVPITTAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8167 43.506 47.0 1187300.0 25 0 168850.0 + 7810 ELIPLFLQV 9 78 536.3238825108622 1070.6332120885245 2 536.3239623904228 MULTI CID FTMS 0 0 0 8164 700566.875 0.4256219228133445 -10 0.4592628479003906 3 Unmodified _ELIPLFLQV_ REV__ENSG00000101158|ENST00000652272|NELFCD;REV__ENST00000474543.5_1_20:57569146-57569728:+|nuORF;REV__nc|ENSG00000101158|Q8IXH7|NELFCD 16.942295170755138 0.3780752226737986 5 [AG]T{I|L}R{I|L}{I|L} 7 -1 27.831 0.0 0.0 2.5995 0.0 0.0 0.0 343.1595633003712 343.1595633003712 3.649546485430321 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5189301784845296 0.0 [AG]T{I|L}R{I|L}{I|L} 2.5995 - 482 1 2.089 49527.1 1.0 3830 4335 8164 SUDHL4_400M_050219_1,8167 SUDHL4_400M_050219_1,8167,ELIPLFLQV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8168 43.509 123.0 470840.0 25 0 34020.0 + 2262 AQFPNGPQF 9 104 503.24309251444816 1004.4716320956964 2 503.2433959841728 MULTI CID FTMS 0 0 0 8164 228611.890625 0.7322968643063987 -8 0.3392677307128906 4 Unmodified _AQFPNGPQF_ ENSG00000134375|ENST00000367287|TIMM17A;ENST00000482943.1_1_1:201932715-201938679:+|nuORF 54.773552608820026 0.0299037012502309 5 GPQ{M(Oxidation (M))|F} 4 5 21.498 0.0 0.0 2.1402 0.0 0.0 557.2569847341714 0.0 557.2569847341714 0.0 -0.4132529882056701 -0.4132529882056701 0.0 0 0.3807196863200844 0.0 0.0 0.6237125054200234 + GPQ{M(Oxidation (M))|F} 2.1402 + + 134 + 1 2.089 51767.0 1.0 3831 4335 8164 SUDHL4_400M_050219_1,8168 SUDHL4_400M_050219_1,8168,AQFPNGPQF True True AQFPNGPQF 43.508509 503.243395984173 13575933.0 8164.0 ENSG00000134375|ENST00000367287|TIMM17A;;ENST00000482943.1_1_1:201932715-201938679:+|nuORF 7.593420346577962 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8170 43.513 32.0 1789600.0 25 0 149380.0 + 24630 MLPPPPLTA 9 81 468.7643962398982 935.5142395465964 2 468.7642394900322 MULTI CID FTMS 0 0 0 8169 1623891.0 0.7620617029843476 5 -0.0468177795410156 1 Unmodified _MLPPPPLTA_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 74.39630413441286 0.0193995060682538 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PP{I|L}{I|L}DS 8 4 41.891 0.0 0.0 4.4778 0.0 0.0 0.0 66.03571497134999 66.03571497134999 14.138568026386691 0.0 0.0 0.0 0 1.2302046884880935 2.0 1.25 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PP{I|L}{I|L}DS 4.4778 - 215 + 1 2.089 50015.7 1.0 3832 4336 8169 SUDHL4_400M_050219_1,8170 SUDHL4_400M_050219_1,8170,MLPPPPLTA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8171 43.515 102.0 563160.0 25 0 76442.0 + -1 VLCPPELK 8 89 478.26953280556666 954.5245126779332 2 478.2697631716728 MULTI CID FTMS 0 0 0 8169 520655.03125 0.4873589139297747 9 -0.1252479553222656 2 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))PPELK_ REV__ENSG00000142207|ENST00000382751|URB1 2.889219685676258 0.8067950007271085 5 V 1 -1 10.485 0.0 0.0 1.0984 0.0 0.0 837.4453023281271 0.0 837.4453023281271 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0984 + + 6 + 1 2.089 51606.8 1.0 3833 4336 8169 SUDHL4_400M_050219_1,8171 SUDHL4_400M_050219_1,8171,VLCPPELK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8172 43.522 342.0 347160.0 25 0 50730.0 -1 0 118 396.8017597775706 791.5889666219413 2 396.8013183474541 MULTI CID FTMS 0 0 0 8169 233819.890625 0.6766878020161982 4 -0.0314903259277343 3 5 {I|L}{I|L}{I|L} 3 -1 36.0 0.0 0.0 4.5478 0.0 0.0 0.0 449.31220422916255 449.31220422916255 21.00711233356286 0.0 0.0 0.0 0 1.1307196863200843 0.0 0.0 0.0 {I|L}{I|L}{I|L} 4.5478 - 58 + 1 2.089 96392.1 1.0 3834 4336 8169 SUDHL4_400M_050219_1,8172 SUDHL4_400M_050219_1,8172, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8174 43.526 89.0 882620.0 25 0 46722.0 -1 0 94 873.9145653402629 1745.8145777473258 2 873.9150878787041 MULTI CID FTMS 0 0 0 8173 762036.25 0.933003981454061 1 -0.0104484558105468 1 5 [MN]PN{I|L}NEA[H{I|L}]{[CA]|SS}N{I|L} 14 -1 76.991 0.0 0.0 4.41 0.0 0.0 0.0 208.07317529849848 208.07317529849848 45.66524461703182 0.0 0.0 0.0 0 1.055462187404089 1.5228787452803376 0.0 0.805462187404089 [MN]PN{I|L}NEA[H{I|L}]{[CA]|SS}N{I|L} 4.41 - 893 + 1 2.089 63103.9 1.0 3835 4337 8173 SUDHL4_400M_050219_1,8174 SUDHL4_400M_050219_1,8174, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8175 43.532 309.0 191290.0 25 0 14184.0 -1 SLNCTWTI 8 94 497.7387680448085 0 497.7403137087822 PEAK CID FTMS 0 0 0 8173 111647.96875 0.953207780091754 -3 0.0457191467285156 2 Carbamidomethyl (C) _SLNC(Carbamidomethyl (C))TWTI_ ENSG00000183117|ENST00000635120|CSMD1;ENST00000523488.5_1_8:3008913-3253839:-|nuORF;nc|ENSG00000183117|Q96PZ7-2|CSMD1;nc|ENSG00000183117|Q96PZ7-3|CSMD1;nc|ENSG00000183117|Q96PZ7-4|CSMD1 14.581692164780916 0.4900557725783909 5 S 1 -1 6.9897 0.0 0.0 0.70357 0.0 0.0 214.99289604305017 688.4151705377561 903.4080665808062 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.70357 + + 35 + 1 2.089 52444.2 1.0 3836 4337 8173 SUDHL4_400M_050219_1,8175 SUDHL4_400M_050219_1,8175,SLNCTWTI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8179 43.549 355.0 252880.0 25 0 28356.0 + 8861 FAALHGPAL 9 132 448.751666216436 895.4887794996721 2 448.7527038455009 MULTI CID FTMS 0 0 0 8178 82507.546875 0.747057087130084 -2 0.0078849792480468 1 Unmodified _FAALHGPAL_ ENSG00000100304|ENST00000216129|TTLL12 45.7499826716795 0.0496882803020414 5 [VS]{I|L}GH{I|L}AAE 9 7 + 28.832 0.0 0.0 3.2197 3.2197 77.112 0.0 0.0 0.0 3.606116777413721 3.606116777413721 3.606116777413721 3.606116777413721 0 0.5796896906561032 0.0 0.3703715150305281 0.0 [VS]{I|L}GH{I|L}AAE;{M(Oxidation (M))|F}AA{I|L}HGPA{I|L};{M(Oxidation (M))|F}AA{I|L}TA[R{M(Oxidation (M))|F}];[VS]{I|L}GH[RV]E;{M(Oxidation (M))|F}[RV]HGPA{I|L};{M(Oxidation (M))|F}[RV]TA[R{M(Oxidation (M))|F}];{M(Oxidation (M))|F}A[KT][{M(Oxidation (M))|F}V]A{I|L};{M(Oxidation (M))|F}AA{I|L}H[QP]{I|L};{M(Oxidation (M))|F}AA{I|L}[YQ]A{I|L};{M(Oxidation (M))|F}[RV]H[QP]{I|L} 3.2197;2.817;2.7137;2.3233;1.9206;1.8248;1.6742;1.5111;1.1749;0.62224 -;+;-;-;-;-;-;-;-;- + 229 1 2.089 71573.4 1.0 3837 4340 8178 SUDHL4_400M_050219_1,8179 SUDHL4_400M_050219_1,8179,FAALHGPAL True True FAALHGPAL 43.54894 448.752703845501 683476.9375 8178.0 ENSG00000100304|ENST00000216129|TTLL12 5.6829837163289385 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8180 43.555 353.0 192100.0 25 0 93990.0 12469 GVAGPKCG 8 55 688.3469053475931 687.339628880993 1 688.3476440310478 MULTI CID FTMS 0 0 0 8178 192714.0625 0.0616866654892532 15 -0.7640457153320312 2 Unmodified _GVAGPKCG_ ENSG00000188157|ENST00000379370|AGRN;ENST00000479707.1_1_1:981138-981653:+|nuORF;nc|ENSG00000188157|O00468-2|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN 0.7936320650641473 0.8195151834710337 5 {I|L} 1 8 11.42 0.0 0.0 1.6615 0.0 0.0 556.2446714608743 0.0 556.2446714608743 0.0 0.8240512432299596 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.6615 - 7 + 1 2.089 54330.6 1.0 3838 4340 8178 SUDHL4_400M_050219_1,8180 SUDHL4_400M_050219_1,8180,GVAGPKCG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8183 43.568 322.0 179940.0 25 0 12145.0 + 12157 GQMQNIQF 8 122 483.2297140705904 964.4448752079808 2 483.2289306521416 MULTI CID FTMS 0 0 0 8182 63701.0703125 0.5712005061809545 1 -0.0360755920410156 1 Unmodified _GQMQNIQF_ nc|ENSG00000148019|Q5JTW2-5|CEP78;nc|ENSG00000148019|Q5JTW2|CEP78 19.438996006549623 0.6237395211498085 5 {[QG]|[NA]}GM{[QG]|[NA]}{I|L}Q{M(Oxidation (M))|F} 9 2 {[QG]|[NA]}GM{[QG]|[NA]}{I|L} + + 19.821 10.563 1.5735 2.0551 2.0551 52.983 0.0 0.0 0.0 0.0 3.615012971296988 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {[QG]|[NA]}GM{[QG]|[NA]}{I|L}Q{M(Oxidation (M))|F} 2.0551 - 228 + 1 2.089 51728.3 1.0 3839 4342 8182 SUDHL4_400M_050219_1,8183 SUDHL4_400M_050219_1,8183,GQMQNIQF False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 8184 43.582 800.0 181750.0 25 0 12900.0 + 1459 ALFDAQAQV 9 158 481.75204373363545 961.4895345340708 2 481.7512084841728 MULTI CID FTMS 0 0 0 8182 128955.265625 0.9737975752335518 -2 0.0194511413574218 2 Unmodified _ALFDAQAQV_ ENSG00000105397|ENST00000525621|TYK2 57.47134341890925 0.0274820932774257 5 [{I|L}A]D{M(Oxidation (M))|F}AQ 6 4 35.728 0.0 0.0 3.7159 0.0 0.0 0.0 313.1557158256034 313.1557158256034 13.244828250613295 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.4247425010840047 [{I|L}A]D{M(Oxidation (M))|F}AQ 3.7159 - 823 1 2.089 115297.7 0.6200000047683716 3840 4342 8182 SUDHL4_400M_050219_1,8184 SUDHL4_400M_050219_1,8184,ALFDAQAQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8185 43.596 800.0 243910.0 25 0 26841.0 -1 0 146 865.9009586279686 1729.7873643227372 2 865.9015380740166 MULTI CID FTMS 0 0 0 8182 82068.796875 0.4127998856949564 -7 0.060943603515625 3 5 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADDSVH{M(Oxidation (M))|F}{I|L}Q 15 -1 + 62.82 0.0 0.0 3.6317 3.6317 77.438 0.0 0.0 0.0 12.244689683626646 9.640012553530966 9.640012553530966 3.23976127281977 0 0.7742275032520141 0.0 0.0 0.6307196863200843 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADDSVH{M(Oxidation (M))|F}{I|L}Q;[MN]{I|L}N{I|L}NADDSVH{M(Oxidation (M))|F}{I|L}Q;[MN]PDKNADDSVH{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NWDSVH{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADD[RN]Q[KG]Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGADDSVH{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NADDSVH{M(Oxidation (M))|F}{I|L}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}NN{I|L}NADDSVH{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}T[WK]SDDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[MN]{I|L}N{I|L}NWDSVH{M(Oxidation (M))|F}{I|L}Q 3.6317;3.4444;3.2704;3.2449;3.1413;3.1096;3.1096;3.107;3.0794;3.0576 -;-;-;-;-;-;-;-;-;- 18068 + 1 2.089 128967.7 0.6000000238418579 3841 4342 8182 SUDHL4_400M_050219_1,8185 SUDHL4_400M_050219_1,8185, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8187 43.6 39.0 1325800.0 25 0 207050.0 + 16930 KILEDVVGV 9 76 486.29250896015975 970.5704649871196 2 486.2922241091728 MULTI CID FTMS 0 0 0 8186 1247651.5 0.935828259800509 1 -0.0224685668945312 1 Unmodified _KILEDVVGV_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 45.69961567697781 0.0497987121815769 5 {[QN]|[E{I|L}]|[KN]}DK{I|L}VVGV 9 4 + 64.491 0.0 0.0 6.6447 6.6447 94.043 0.0 0.0 0.0 3.2568864632742844 40.66901560044258 3.2568864632742844 16.53720958383822 0 1.305462187404089 0.0 0.7614393726401688 0.0 {[QN]|[E{I|L}]|[KN]}DK{I|L}VVGV;{[QN]|[E{I|L}]|[KN]}DV[K{I|L}]VGV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]DVVGV;[VG]{[WN]|[YH]}[K{I|L}]VR;{[QN]|[E{I|L}]|[KN]}DVV[K{I|L}]GV;[VG]{[WN]|[YH]}[K{I|L}]RV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]VDVGV;[VG]{[WN]|[YH]}V[K{I|L}]R;{[QN]|[E{I|L}]|[KN]}{[CP]|[EA]}{I|L}[K{I|L}]GV;{[QN]|[E{I|L}]|[KN]}[K{I|L}]VS[PS]V 6.6447;4.9408;4.6129;4.1092;3.8008;3.6761;3.6004;3.3614;1.3773;0.32339 -;-;-;-;-;-;-;-;-;- 333 1 2.089 43912.1 1.0 3842 4343 8186 SUDHL4_400M_050219_1,8187 SUDHL4_400M_050219_1,8187,KILEDVVGV True True KILEDVVGV 43.600313 486.292224109173 8276216.5 8186.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 6.405115922292073 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8188 43.602 95.0 626810.0 25 0 71278.0 + -1 RTIEYLEEV 9 85 575.8430149974589 1149.6714770617175 2 575.8434326052666 MULTI CID FTMS 0 0 0 8186 401023.71875 0.9213434477918072 -2 0.0401992797851562 2 Carbamidomethyl (C) _LSKFLC(Carbamidomethyl (C))KRV_ ENSG00000084754|ENST00000380649|HADHA 4.75600775471527 0.7486543447549536 5 EE[K{I|L}]Y{I|L}EE 8 -1 25.138 0.0 0.0 2.1865 0.0 0.0 0.0 113.14515006768298 113.14515006768298 8.940162615404073 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 EE[K{I|L}]Y{I|L}EE 2.1865 - 61 1 2.089 48098.5 1.0 3843 4343 8186 SUDHL4_400M_050219_1,8188 SUDHL4_400M_050219_1,8188,LSKFLCKRV False False RTIEYLEEV 43.6024 575.843432605267 2028619.625 8186.0 ENSG00000084754|ENST00000380649|HADHA 2.8308614095052085 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8189 43.607 253.0 369760.0 25 0 75905.0 42340 VTAPKSLI 8 106 414.7619623051592 827.5093716771185 2 414.7632018923759 MULTI CID FTMS 0 0 0 8186 182577.875 0.0542784219951164 16 -1.13330078125 3 Unmodified _VTAPKSLI_ ENST00000329321.3_3_2:133174433-133174727:+|nuORF 5.760428011301431 0.7893668129297577 5 {I|L} 1 7 12.764 0.0 0.0 1.5425 0.0 0.0 696.4143379630544 0.0 696.4143379630544 0.0 12.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5425 + + 8 + 1 2.089 76860.6 1.0 3844 4343 8186 SUDHL4_400M_050219_1,8189 SUDHL4_400M_050219_1,8189,VTAPKSLI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8190 43.618 624.0 199040.0 25 0 13664.0 + 17260 KLNVAPLAV 9 137 462.7976805475208 923.5808081618416 2 462.7977172732353 MULTI CID FTMS 0 0 0 8186 105967.7421875 0.6476993466024781 -3 0.0555267333984375 4 Unmodified _KLNVAPLAV_ ENSG00000152082|ENST00000281871|MZT2B;ENSG00000173272|ENST00000309451|MZT2A;ENST00000480182.1_1_2:130940128-130948196:+|nuORF;ENST00000485869.1_1_2:130940017-130940434:+|nuORF 34.10243960390752 0.1078313939113124 5 [{I|L}P]AAAAK{I|L}AV 10 5 + 48.81 0.0 0.0 5.2849 5.2849 78.762 0.0 0.0 0.0 1.6469711600186798 16.532125137753432 1.6469711600186798 0.5115252244738144 0 0.9247425010840048 1.3979400086720375 0.0 0.0 [{I|L}P]AAAAK{I|L}AV;[{I|L}P]A{[NV]|[RG]}K{I|L}AV;{[VA]|[{I|L}G]}N[K{I|L}]P{I|L}AV;{[VA]|[{I|L}G]}GG[K{I|L}]P{I|L}AV;{[QV]|[N{I|L}]|[RA]|[KV]}G[K{I|L}]P{I|L}AV;{[NV]|[RG]}[K{I|L}]AP{I|L}AV;[{I|L}P]A[K{I|L}]{[NV]|[RG]}AV;{[NV]|[RG]}A[K{I|L}]P{I|L}AV;{[VA]|[{I|L}G]}N[{I|L}P]K{I|L}AV;[{I|L}A]PAAAK{I|L}AV 5.2849;5.2295;5.1066;4.8988;4.3076;3.8311;3.7787;3.6728;3.3367;3.3288 -;-;-;-;-;-;-;-;-;- 351 1 2.089 100220.0 1.0 3845 4343 8186 SUDHL4_400M_050219_1,8190 SUDHL4_400M_050219_1,8190,KLNVAPLAV True True KLNVAPLAV 43.617982 462.797717273235 843598.5625 8186.0 ENSG00000152082|ENST00000281871|MZT2B;;ENST00000480182.1_1_2:130940128-130948196:+|nuORF;;ENSG00000173272|ENST00000309451|MZT2A;;ENST00000485869.1_1_2:130940017-130940434:+|nuORF 2.914822657903036 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8192 43.623 38.0 1257300.0 25 0 260170.0 + -1 VRKVQFPIM 9 60 567.3298300720465 1132.645107210893 2 567.3299438357353 MULTI CID FTMS 0 0 0 8191 1288824.875 0.954478554038816 -1 0.0224685668945312 1 Oxidation (M) _VRKVQFPIM(Oxidation (M))_ REV__ENST00000509330.5_1_6:64394512-64394560:+|nuORF 2.302733041254933 0.8342969208511092 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.089 42881.0 1.0 3846 4344 8191 SUDHL4_400M_050219_1,8192 SUDHL4_400M_050219_1,8192,VRKVQFPIM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8193 43.627 209.0 292070.0 25 0 44660.0 27841 PLQSKQPVPL 10 91 553.8303356439183 1105.6461183546364 2 553.8303100466728 MULTI CID FTMS 0 0 0 8191 218280.78125 0.172011410451283 -6 0.0858802795410156 2 Unmodified _PLQSKQPVPL_ ENSG00000104973|ENST00000312865|MED25;nc|ENSG00000104973|Q71SY5-4|MED25;nc|ENSG00000104973|Q71SY5-5|MED25 3.944395688203298 0.708391353636983 5 {I|L} 1 9 9.6777 0.0 0.0 0.8753 0.0 0.0 974.5510083466272 0.0 974.5510083466272 0.0 5.698309967145034 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.8753 + + 27 + 1 2.089 53269.3 1.0 3847 4344 8191 SUDHL4_400M_050219_1,8193 SUDHL4_400M_050219_1,8193,PLQSKQPVPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8194 43.628 37.0 1377500.0 25 0 138370.0 + + 15896 SISLQITQV 9 97 493.7845596749932 985.5545664167864 2 494.7870361208916 MULTI CID FTMS 0 0 0 8191 862317.5625 0.9830237910737946 -1 0.0224685668945312 3 Unmodified _ISSLRSPNL_ ENST00000605233.2_1_12:89919492-89933896:+|nuORF 28.486842064014134 0.1687311288560894 5 {[TV]|[{I|L}S]}S{I|L}Q[TP][Q{I|L}] 9 -1 + 41.019 0.0 0.0 4.162 4.162 77.587 0.0 0.0 0.0 13.275997511190624 2.7983344864753192 2.7983344864753192 2.26280941356464 0 0.0 2.0 0.9698565171985376 0.25 {[TV]|[{I|L}S]}S{I|L}Q[TP][Q{I|L}];{[TV]|[{I|L}S]}{I|L}SQ[TP][Q{I|L}];{[TV]|[{I|L}S]}E[KA][TP][Q{I|L}];{[TV]|[{I|L}S]}S{I|L}[AG][TP][Q{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}[PS]V{I|L}C[Q{I|L}];{[TV]|[{I|L}S]}{I|L}S[AG][TP][Q{I|L}];{NN|[MP]|[D{I|L}]|[EV]}T[KA][TP][Q{I|L}];{[WT]|[RM]}{I|L}Q[TP][Q{I|L}];{[WT]|[RM]}{I|L}[AG][TP][Q{I|L}];[AG]V{[{M(Oxidation (M))|F}H]|[RQ]}KS[Q{I|L}] 4.162;3.9324;3.5286;2.974;2.8149;2.7444;2.6746;1.7163;0.77651;0.12325 -;-;-;-;-;-;-;-;-;- 370 1 2.089 45914.1 1.0 3848 4344 8191 SUDHL4_400M_050219_1,8194 SUDHL4_400M_050219_1,8194,ISSLRSPNL False False SISLQITQV 43.627936 494.787036120892 5454508.5 8191.0 ENST00000605233.2_1_12:89919492-89933896:+|nuORF 2.1870984037717185 2.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8195 43.63 98.0 630920.0 25 0 80967.0 + 23976 LVTGLRKEF 9 106 531.816818148373 1061.619083363546 2 531.8173095583916 MULTI CID FTMS 0 0 0 8191 283115.0 0.2636418218444684 19 -1.5511856079101562 4 Unmodified _LVTGLRKEF_ REV__ENSG00000120800|ENST00000261637|UTP20 8.593279151180031 0.6146971463335029 5 [{I|L}V]NQ{I|L} 5 -1 16.955 0.0 0.0 1.5971 0.0 0.0 0.0 491.256021189971 491.256021189971 4.190884878976213 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [{I|L}V]NQ{I|L} 1.5971 - 118 1 2.089 55134.5 1.0 3849 4344 8191 SUDHL4_400M_050219_1,8195 SUDHL4_400M_050219_1,8195,LVTGLRKEF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8196 43.634 191.0 323820.0 25 0 24451.0 1430 ALDRYWSI 8 102 512.265759598951 1022.516966264702 2 512.2659789919853 MULTI CID FTMS 0 0 0 8191 162669.546875 0.3238393330786379 -4 0.0779953002929687 5 Unmodified _ALDRYWSI_ ENSG00000157219|ENST00000287907|HTR5A 15.768221252438446 0.6779680726941459 5 {I|L}{I|L}RE 4 6 31.559 0.0 0.0 3.0864 0.0 0.0 0.0 508.1939549088193 508.1939549088193 11.327323286600803 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 {I|L}{I|L}RE 3.0864 - 108 1 2.089 56591.4 1.0 3850 4344 8191 SUDHL4_400M_050219_1,8196 SUDHL4_400M_050219_1,8196,ALDRYWSI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8198 43.639 27.0 2354900.0 25 0 111800.0 -1 MYFWKRFCFWK 11 64 857.9018957379758 1713.7892385427515 2 857.9023925662041 MULTI CID FTMS 0 0 0 8197 1898116.375 0.9683128463718936 2 -0.0968437194824218 1 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))YFWKRFC(Carbamidomethyl (C))FWK_ ENSG00000121446|ENST00000294854|RGSL1;nc|ENSG00000121446|A5PLK6-2|RGSL1;nc|ENSG00000121446|A5PLK6-3|RGSL1 0.0 0.8751479354844584 5 [MN]PN{I|L}NADQ 9 -1 77.159 0.0 0.0 4.5022 0.0 0.0 0.0 713.3380221002561 713.3380221002561 44.49478448944497 0.0 0.0 0.0 0 1.1307196863200843 1.6989700043360187 0.0 0.4247425010840047 [MN]PN{I|L}NADQ 4.5022 - 249 + 1 2.088 50829.8 1.0 3851 4345 8197 SUDHL4_400M_050219_1,8198 SUDHL4_400M_050219_1,8198,MYFWKRFCFWK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8199 43.648 526.0 234610.0 25 0 88998.0 -1 0 109 542.2361861229457 541.2289096563456 1 542.2359496951103 MULTI CID FTMS 0 0 0 8197 123178.84375 1.0 0 0.0 2 5 {I|L} 1 -1 12.218 0.0 0.0 2.2575 0.0 0.0 410.1338606834925 0.0 410.1338606834925 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.2575 - 43 + 1 2.088 100671.4 1.0 3852 4345 8197 SUDHL4_400M_050219_1,8199 SUDHL4_400M_050219_1,8199, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8200 43.652 239.0 267460.0 25 0 16327.0 + 40715 VLHELTFQA 9 110 529.2873606140183 1056.5601682948366 2 529.2887451052666 MULTI CID FTMS 0 0 0 8197 114440.328125 0.8354385316538285 -1 0.0157623291015625 3 Unmodified _VLHELTFQA_ ENSG00000116266|ENST00000370008|STXBP3;ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1 21.74664581756881 0.2544899275067181 5 [{I|L}A]GE{I|L} 5 6 16.955 0.0 0.0 1.6047 0.0 0.0 0.0 570.2524344904022 570.2524344904022 1.1037070061334455 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [{I|L}A]GE{I|L} 1.6047 - 228 1 2.088 55343.9 1.0 3853 4345 8197 SUDHL4_400M_050219_1,8200 SUDHL4_400M_050219_1,8200,VLHELTFQA False True VLHELTFQA 43.652339 529.288745105267 1050283.625 8197.0 nc|ENSG00000136854|P61764-2|STXBP1;;ENSG00000116266|ENST00000370008|STXBP3;;ENSG00000136854|ENST00000373299|STXBP1 5.944227695465088 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8201 43.666 800.0 186770.0 25 0 13755.0 + 37489 TLFPEKQIY 9 155 569.8108609162681 1137.607168899336 2 569.8112670779228 MULTI CID FTMS 0 0 0 8197 100923.7109375 1.0 0 0.0 4 Unmodified _TLFPEKQIY_ ENSG00000162702|ENST00000367353|ZNF281;nc|ENSG00000162702|Q9Y2X9-2|ZNF281 29.43715596616401 0.1566398223704148 5 [{I|L}T][NG]P{M(Oxidation (M))|F}{I|L}T{I|L}Y 10 5 + 56.787 0.0 0.0 4.9918 4.9918 80.478 0.0 0.0 0.0 4.1844060370947815 4.1844060370947815 4.1844060370947815 2.614393726401687 0 1.0924778212679485 2.0 1.124803706770636 0.0 [{I|L}T][NG]P{M(Oxidation (M))|F}{I|L}T{I|L}Y;[{I|L}T][NG]P{I|L}{M(Oxidation (M))|F}T{I|L}Y;[{I|L}T]{[WT]|[RM]}Q{I|L}T{I|L}Y;[{I|L}T]{M(Oxidation (M))|F}PE[KQ]{I|L}Y;[{I|L}T]{M(Oxidation (M))|F}PE[KQ]Y{I|L};[{I|L}T][RD]GS{I|L}T{I|L}Y;[{I|L}T]{[WT]|[RM]}[AG]{I|L}T{I|L}Y;{[QN]|[E{I|L}]|[KN]}MKQ{I|L}T{I|L}Y;[EP]KQ{M(Oxidation (M))|F}{I|L}T{I|L}Y;[EP]KQ{I|L}{M(Oxidation (M))|F}T{I|L}Y 4.9918;4.762;4.6396;4.624;4.0096;3.9552;3.8302;3.8173;3.6788;3.449 -;-;-;+;-;-;-;-;-;- + 1789 1 2.088 113511.0 0.5899999737739563 3854 4345 8197 SUDHL4_400M_050219_1,8201 SUDHL4_400M_050219_1,8201,TLFPEKQIY False True TLFPEKQIY 43.666171 569.811267077923 501254.0 8197.0 nc|ENSG00000162702|Q9Y2X9-2|ZNF281;;ENSG00000162702|ENST00000367353|ZNF281 6.582664489746094 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8202 43.68 800.0 177040.0 25 0 15384.0 40661 VLEMLLKWVA 10 137 601.3554807651158 0 601.3569824099541 PEAK CID FTMS 0 0 0 8197 115719.5390625 0.9356437866936216 -1 0.0157623291015625 5 Unmodified _VLEMLLKWVA_ ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A;nc|ENSG00000183873|Q14524-5|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;nc|ENSG00000183873|Q14524|SCN5A 14.838274106304384 0.3381107837965078 5 AAE 3 9 21.555 0.0 0.0 1.7952 0.0 0.0 717.4265621316148 209.13021265201408 926.5567747836288 0.0 0.0 0.0 0.0 0 0.5 0.0 0.5752574989159953 0.0 AAE 1.7952 - 553 + 1 2.088 102734.7 0.6200000047683716 3855 4345 8197 SUDHL4_400M_050219_1,8202 SUDHL4_400M_050219_1,8202,VLEMLLKWVA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8204 43.687 254.0 141040.0 25 0 17887.0 -1 0 60 959.1136224825236 2874.319038047771 3 959.1190673708916 MULTI CID FTMS 0 0 0 8203 130035.5625 0.1355870116838175 -2 0.0620040893554687 1 5 E{M(Oxidation (M))|F} 2 -1 7.9588 0.0 0.0 0.27689 0.0 0.0 1721.7903037721833 873.3950899713499 2595.185393743533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{M(Oxidation (M))|F} 0.27689 - 20 + 1 2.088 36688.8 1.0 3856 4346 8203 SUDHL4_400M_050219_1,8204 SUDHL4_400M_050219_1,8204, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8205 43.698 601.0 174270.0 25 0 58130.0 -1 0 116 558.3295529843292 557.3222765177292 1 558.3295165896416 MULTI CID FTMS 0 0 0 8203 101683.5703125 1.0 0 0.0 2 5 VVPP{M(Oxidation (M))|F} 5 -1 + 35.71 0.0 0.0 6.4075 6.4075 86.281 0.0 0.0 0.0 15.93963854432521 4.030195342013116 4.030195342013116 4.030195342013116 0 0.4247425010840047 1.154901959985743 0.0 0.0 VVPP{M(Oxidation (M))|F};VVPM{I|L};VV{M(Oxidation (M))|F}{[HG]|PP};VV{[QG]|[NA]}GV;{I|L}{I|L}GQQ;[{I|L}A]VQQ 6.4075;5.6844;3.9225;1.9918;1.7541;0.92277 -;-;-;-;-;- 66 + 1 2.088 84382.3 1.0 3857 4346 8203 SUDHL4_400M_050219_1,8205 SUDHL4_400M_050219_1,8205, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8206 43.704 370.0 343320.0 25 0 44172.0 + 34441 SLYDYNPNL 9 134 549.7586243593047 1097.5026957854093 2 549.7589599490166 MULTI CID FTMS 0 0 0 8203 190774.8125 0.2802905606982918 -2 0.0620040893554687 3 Unmodified _SLYDYNPNL_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 112.59319219568356 0.0043923200227745 5 {[TV]|[{I|L}S]}YDYN 6 3 60.667 0.0 0.0 5.5277 0.0 0.0 0.0 339.1641725848396 339.1641725848396 24.76850615731473 0.0 0.0 0.0 0 0.805462187404089 2.0 1.575257498915995 0.3494850021680094 + {[TV]|[{I|L}S]}YDYN 5.5277 + + 1151 1 2.088 99444.0 1.0 3858 4346 8203 SUDHL4_400M_050219_1,8206 SUDHL4_400M_050219_1,8206,SLYDYNPNL True True SLYDYNPNL 43.704477 549.758959949017 3631569.5 8203.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 6.510492324829102 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8207 43.717 716.0 279020.0 25 0 20962.0 + + 18642 ALGPIREL 8 177 434.7659930580155 867.517433182831 2 434.7662841677666 MULTI CID FTMS 0 0 0 8203 136233.3125 1.0 0 0.0 4 Unmodified _LAGPLRIE_ nc|ENSG00000021574|Q9UBP0-3|SPAST;ENSG00000021574|ENST00000315285|SPAST;nc|ENSG00000021574|Q9UBP0-2|SPAST;nc|ENSG00000021574|Q9UBP0-4|SPAST 19.256988751693697 0.6264283240490721 5 [{I|L}A]GP{I|L} 5 -1 45.412 0.0 0.0 5.2347 0.0 0.0 0.0 413.21384607486567 413.21384607486567 35.57902146726378 0.0 0.0 0.0 0 0.6203715150305281 2.0 0.0 0.0 [{I|L}A]GP{I|L} 5.2347 + + 112 + 1 2.088 157376.9 1.0 3859 4346 8203 SUDHL4_400M_050219_1,8207 SUDHL4_400M_050219_1,8207,LAGPLRIE False False ALGPIREL 43.716883 434.766284167767 674076.5625 8203.0 nc|ENSG00000021574|Q9UBP0-3|SPAST;;ENSG00000021574|ENST00000315285|SPAST;;nc|ENSG00000021574|Q9UBP0-2|SPAST;;nc|ENSG00000021574|Q9UBP0-4|SPAST 0.7630696495374044 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8208 43.731 800.0 371490.0 25 0 55676.0 + 14896 ILLENFSAEK 10 177 582.3196000498903 1162.6246471665804 2 582.3187133669853 MULTI CID FTMS 0 0 0 8203 111463.5546875 0.0948684634124726 -2 0.0620040893554687 5 Unmodified _ILLENFSAEK_ ENST00000560979.1_1_15:49715501-49715549:+|nuORF 107.5634045930896 0.0042230779264997 5 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK 10 0 + 126.8 0.0 0.0 10.906 10.906 95.011 0.0 0.0 0.0 76.07965158626804 18.98954178950649 18.98954178950649 9.164539485499262 0 1.360924374808178 2.0 1.9383753548010496 0.8962566630072955 + + {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}S{[TV]|[{I|L}S]}Q;{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SA[SG]{I|L};{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}S{[QS]|[NT]}{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}S{[TV]|[{I|L}S]}Q;{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}S{[QS]|[NT]}{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SA[SG]{I|L};{I|L}{I|L}{I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}SAEK;{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{NN|[MP]|[D{I|L}]|[EV]}SAEK 10.906;10.118;9.0534;8.883;8.8667;8.2652;8.0784;7.7972;7.4534;6.6738 +;-;-;-;-;-;-;-;-;- + 3241 + 1 2.088 218463.8 0.6000000238418579 3860 4346 8203 SUDHL4_400M_050219_1,8208 SUDHL4_400M_050219_1,8208,ILLENFSAEK True True ILLENFSAEK 43.730714 582.318713366985 21589453.5 8203.0 ENST00000560979.1_1_15:49715501-49715549:+|nuORF 7.41649850209554 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8210 43.735 31.0 1534600.0 25 0 323460.0 + 23059 LSLGVSSWLK 10 68 545.3165761791628 1088.6185994251257 2 545.3169433474541 MULTI CID FTMS 0 0 0 8209 1815939.375 0.5505056120251901 -3 0.1126060485839843 1 Unmodified _LSLGVSSWLK_ REV__ENST00000591226.1_1_19:16212172-16212223:+|nuORF 1.4819007175156935 0.719781833666733 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.088 43825.6 1.0 3861 4347 8209 SUDHL4_400M_050219_1,8210 SUDHL4_400M_050219_1,8210,LSLGVSSWLK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8211 43.737 67.0 679190.0 25 0 46022.0 + 26191 NQFPGFKEV 9 90 533.2715420158133 1064.5285310984266 2 533.2721435427666 MULTI CID FTMS 0 0 0 8209 440477.9375 0.0783165659923903 21 -1.8398971557617188 2 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 23.78978130925829 0.2284941198415988 5 {M(Oxidation (M))|F}K{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 7 7 31.075 0.0 0.0 2.9191 0.0 0.0 154.0746021955094 0.0 154.0746021955094 0.0 20.590088361946428 0.0 0.0 0 1.0 0.0 0.0 0.0 {M(Oxidation (M))|F}K{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 2.9191 - 188 1 2.088 40118.0 1.0 3862 4347 8209 SUDHL4_400M_050219_1,8211 SUDHL4_400M_050219_1,8211,NQFPGFKEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8212 43.741 222.0 780810.0 25 0 101550.0 -1 SLYCSYETN 9 120 568.7322464199445 1135.449939906689 2 568.7325927615166 MULTI CID FTMS 0 0 0 8209 457897.3125 0.978443833269596 -2 0.0968437194824218 3 Carbamidomethyl (C) _SLYC(Carbamidomethyl (C))SYETN_ ENSG00000149380|ENST00000331597|P4HA3;ENST00000525968.1_1_11:73984627-74015361:-|nuORF;ENST00000531716.1_1_11:73996688-73997284:-|nuORF;nc|ENSG00000149380|Q7Z4N8-3|P4HA3 20.453626601364224 0.2830276176381075 5 {I|L}SYD{I|L} 5 -1 60.988 0.0 0.0 5.3712 0.0 0.0 0.0 541.1337374322874 541.1337374322874 49.5676888740561 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.6307196863200843 0.0 {I|L}SYD{I|L} 5.3712 - 219 + 1 2.088 134180.0 1.0 3863 4347 8209 SUDHL4_400M_050219_1,8212 SUDHL4_400M_050219_1,8212,SLYCSYETN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8213 43.743 75.0 594470.0 25 0 83094.0 18543 LAAARGNVDI 10 72 500.2842498427383 998.5539467522766 2 500.7869445681572 MULTI CID FTMS 0 0 0 8209 363741.71875 0.2940810198517292 -2 0.0968437194824218 4 Unmodified _LAAARGNVDI_ ENSG00000186106|ENST00000335659|ANKRD46;nc|ENSG00000186106|Q86W74-1|ANKRD46 11.640296217721598 0.652229146672156 5 {[VA]|[{I|L}G]}[VS]VN{M(Oxidation (M))|F}{I|L} 8 7 28.594 0.0 0.0 2.8635 0.0 0.0 0.0 166.08022784042035 166.08022784042035 15.098812726971715 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}[VS]VN{M(Oxidation (M))|F}{I|L} 2.8635 - 194 1 2.088 38888.7 1.0 3864 4347 8209 SUDHL4_400M_050219_1,8213 SUDHL4_400M_050219_1,8213,LAAARGNVDI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8214 43.757 800.0 272230.0 25 0 27946.0 -1 ISCASSSF 8 178 429.6870025911517 857.3594522491035 2 429.6870300173759 MULTI CID FTMS 0 0 0 8209 288352.78125 0.7949812896196633 -6 0.1752738952636718 5 Carbamidomethyl (C) _ISC(Carbamidomethyl (C))ASSSF_ ENST00000361582.7_1_3:108308574-108308652:+|nuORF 9.347437153973935 0.7675937258251505 5 {I|L}S 2 -1 25.217 0.0 0.0 2.9412 0.0 0.0 0.0 654.221743966461 654.221743966461 7.998037644757048 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}S 2.9412 + + 68 + 1 2.088 171111.9 0.8700000047683716 3865 4347 8209 SUDHL4_400M_050219_1,8214 SUDHL4_400M_050219_1,8214,ISCASSSF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8215 43.759 97.0 545220.0 25 0 44387.0 + 2812 ATWQGILSR 9 97 516.2839035102318 1030.5532540872634 2 516.2832519412041 MULTI CID FTMS 0 0 0 8209 293966.8125 0.9456778057395894 -1 0.0506019592285156 6 Unmodified _ATWQGILSR_ REV__ENST00000262544.6_1_20:18488366-18488540:+|nuORF 22.736283301280096 0.2418982879461534 5 [TA]WQSV{I|L}AR 9 -1 + 63.369 0.0 0.0 6.149 6.149 87.953 0.0 0.0 0.0 51.15024697793565 13.58780533059658 13.58780533059658 7.020534381044499 0 0.0 1.3010299956639813 0.3807196863200844 0.75 [TA]WQSV{I|L}AR;[TA]DAQSV{I|L}AR;[TA]W[AG]SV{I|L}AR;[TA]WQSV{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[TA]DA[AG]SV{I|L}AR;[TA]DAQSV{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[TA]W[AG]SV{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[TA]W[WK]{I|L}AR;[TA]DA[WK]{I|L}AR;[HT][{M(Oxidation (M))|F}T]SV{I|L}AR 6.149;5.4678;5.2555;4.6847;4.5785;4.0034;3.7911;3.6236;2.9371;2.2855 -;-;-;-;-;-;-;-;-;- 118 + 1 2.088 46364.8 1.0 3866 4347 8209 SUDHL4_400M_050219_1,8215 SUDHL4_400M_050219_1,8215,ATWQGILSR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8216 43.762 145.0 730360.0 25 0 87033.0 + 44130 YLDLSENRL 9 98 561.7938221500804 1121.5730913669606 2 561.7938110232353 MULTI CID FTMS 0 0 0 8209 258491.3125 0.728221723499568 -1 0.0506019592285156 7 Unmodified _YLDLSENRL_ ENSG00000177731|ENST00000327031|FLII;ENST00000478416.1_1_17:18157237-18162004:-|nuORF;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENST00000584444.5_1_17:18156710-18162004:-|nuORF;nc|ENSG00000177731|Q13045-3|FLII 29.84058131909904 0.1515068451768857 5 Y{I|L}D{I|L}SE{I|L}[RN] 9 2 + 76.068 0.0 0.0 6.7823 6.7823 89.044 0.0 0.0 0.0 60.85138771613167 4.137342758552691 4.137342758552691 6.276362525516532 0 0.9247425010840048 2.0 0.4247425010840047 0.0 Y{I|L}D{I|L}SE{I|L}[RN];Y{I|L}{I|L}DSE{I|L}[RN];Y{I|L}D{I|L}SE[RN]{I|L};Y{I|L}{I|L}DSE[RN]{I|L};Y{I|L}D{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[NP]{I|L};Y{I|L}{I|L}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[NP]{I|L};Y{I|L}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{I|L}[RN];Y{I|L}A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E[RN]{I|L} 6.7823;6.2226;6.1049;5.5453;4.9699;4.4103;4.3962;3.7189 -;-;+;-;-;-;-;- + 224 + 1 2.088 83030.2 1.0 3867 4347 8209 SUDHL4_400M_050219_1,8216 SUDHL4_400M_050219_1,8216,YLDLSENRL False True YLDLSENRL 43.761774 561.793811023235 1865335.625 8209.0 ENST00000584444.5_1_17:18156710-18162004:-|nuORF;;nc|ENSG00000177731|Q13045-3|FLII;;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;ENST00000478416.1_1_17:18157237-18162004:-|nuORF 4.767501831054688 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8217 43.765 156.0 411070.0 25 0 23007.0 39881 VFLQVHLR 8 102 506.3083174383089 1010.6020819434176 2 506.3092529177666 MULTI CID FTMS 0 0 0 8209 220436.203125 0.6755182842539056 -4 0.1350746154785156 8 Unmodified _VFLQVHLR_ nc|ENSG00000063761|Q86TW2|ADCK1 24.67388899826682 0.525179942228231 5 [{M(Oxidation (M))|F}V]N{I|L}{I|L}{I|L}HR 8 4 + 70.399 0.0 0.0 6.966 6.966 93.321 0.0 0.0 0.0 23.97940008672037 12.783963039504442 12.783963039504442 9.262137858390815 0 0.8807196863200843 1.6989700043360187 0.0 0.4247425010840047 [{M(Oxidation (M))|F}V]N{I|L}{I|L}{I|L}HR;[{M(Oxidation (M))|F}V]GG{I|L}{I|L}{I|L}HR;[{M(Oxidation (M))|F}V]N{I|L}{I|L}{I|L}{[HG]|PP}V;[{M(Oxidation (M))|F}V]GG{I|L}{I|L}{I|L}{[HG]|PP}V;[{M(Oxidation (M))|F}V]VV[RV]HR;[{M(Oxidation (M))|F}V]Q{I|L}[HA]VVV;[{M(Oxidation (M))|F}V][AG]{I|L}[HA]VVV;{[TV]|[{I|L}S]}[HM]VKVVV;{[QN]|[E{I|L}]|[KN]}PEVKVVV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L}[HA]VVV 6.966;6.0495;5.7011;4.3696;2.6646;1.7987;0.8875;0.78965;0.51941;0.41029 -;-;-;-;-;-;-;-;-;- 254 + 1 2.088 56588.1 1.0 3868 4347 8209 SUDHL4_400M_050219_1,8217 SUDHL4_400M_050219_1,8217,VFLQVHLR False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 8218 43.779 800.0 205060.0 25 0 19565.0 + + 44099 TLHRETFYL 9 173 590.7540433325181 1179.493533731836 2 590.7541381716728 MULTI CID FTMS 0 0 0 8209 140346.234375 0.286331243617671 6 -0.4782524108886719 9 Unmodified _YKAYMQFDD_ nc|ENSG00000175305|O96020-2|CCNE2;ENSG00000175305|ENST00000308108|CCNE2 7.910154910731844 0.6385446671287552 5 Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}C(Carbamidomethyl (C))V 8 -1 33.986 0.0 0.0 2.8814 0.0 0.0 131.97886517603462 0.0 131.97886517603462 0.0 22.56637108151088 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}C(Carbamidomethyl (C))V 2.8814 - 1473 + 1 2.088 121759.9 0.6800000071525574 3869 4347 8209 SUDHL4_400M_050219_1,8218 SUDHL4_400M_050219_1,8218,YKAYMQFDD False False TLHRETFYL 43.778691 590.754138171673 518337.96875 8209.0 nc|ENSG00000175305|O96020-2|CCNE2;;ENSG00000175305|ENST00000308108|CCNE2 2.677092353502909 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8219 43.793 800.0 123530.0 25 0 29281.0 + 25871 NLFRNKLKR 9 129 594.8693340609774 1187.7241151887547 2 594.8695556521416 MULTI CID FTMS 0 0 0 8209 131501.046875 0.5661687659233697 -4 0.1350746154785156 10 Unmodified _NLFRNKLKR_ REV__ENSG00000165762|ENST00000641885|OR4K2 4.3292370932331545 0.7635526921153418 5 Y 1 -1 11.42 0.0 0.0 0.9615 0.0 0.0 1006.6498792041828 0.0 1006.6498792041828 0.0 2.968134118955499 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.9615 - 92 + 1 2.088 78370.1 0.6600000262260437 3870 4347 8209 SUDHL4_400M_050219_1,8219 SUDHL4_400M_050219_1,8219,NLFRNKLKR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8221 43.797 59.0 982880.0 25 0 88299.0 + 24631 MLPPPPLTA 9 86 468.7643962398982 935.5142395465964 2 468.7645751833916 MULTI CID FTMS 0 0 0 8220 833013.1875 0.3909175235743468 17 -1.5657806396484375 1 Unmodified _MLPPPPLTA_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 86.12129899796855 0.0160336270647063 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PRM{I|L} 6 5 42.625 0.0 0.0 4.5563 0.0 0.0 0.0 191.0834139459594 191.0834139459594 26.682437647924218 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PRM{I|L} 4.5563 - 255 + 1 2.088 49172.8 1.0 3871 4348 8220 SUDHL4_400M_050219_1,8221 SUDHL4_400M_050219_1,8221,MLPPPPLTA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8222 43.798 40.0 797300.0 25 0 76582.0 + -1 ILELQLTVM 9 76 538.3089618742939 1074.6033708153875 2 538.3094970583916 MULTI CID FTMS 0 0 0 8220 1540067.25 0.98152307725277 -2 0.1122703552246093 2 Oxidation (M) _ILELQLTVM(Oxidation (M))_ REV__ENST00000360642.7_1_4:170557221-170601218:+|nuORF 2.059750862983233 0.8427793054688888 5 V 1 -1 10.379 0.0 0.0 0.96581 0.0 0.0 957.5236874431206 0.0 957.5236874431206 0.0 8.784809756568528 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.96581 + + 6 + 1 2.088 29767.0 1.0 3872 4348 8220 SUDHL4_400M_050219_1,8222 SUDHL4_400M_050219_1,8222,ILELQLTVM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8223 43.799 26.0 2563100.0 25 0 427460.0 20570 LLNLQATDR 9 81 522.2958170662661 1042.577081199332 2 522.2960693240166 MULTI CID FTMS 0 0 0 8220 1814461.375 0.9280480227124706 -2 0.1122703552246093 3 Unmodified _LLNLQATDR_ ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000150275|Q96QU1-3|PCDH15;nc|ENSG00000150275|Q96QU1-4|PCDH15;nc|ENSG00000150275|Q96QU1-6|PCDH15;nc|ENSG00000150275|Q96QU1|PCDH15 4.3292370932331545 0.7635526921153418 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 5 1 2.088 56581.6 1.0 3873 4348 8220 SUDHL4_400M_050219_1,8223 SUDHL4_400M_050219_1,8223,LLNLQATDR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8224 43.804 232.0 363340.0 25 0 45881.0 22226 LPRELDGR 8 106 478.26953280556666 954.5245126779332 2 478.2689391970634 MULTI CID FTMS 0 0 0 8220 227978.875 0.2133995260781067 21 -1.878379821777344 4 Unmodified _LPRELDGR_ nc|ENSG00000116117|Q8TEW8-2|PARD3B 7.910154910731844 0.7763180056447161 5 V 1 8 10.278 0.0 0.0 1.0767 0.0 0.0 837.4449437465842 0.0 837.4449437465842 0.0 0.5236767526000641 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0767 - 36 + 1 2.088 68082.8 1.0 3874 4348 8220 SUDHL4_400M_050219_1,8224 SUDHL4_400M_050219_1,8224,LPRELDGR False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 8225 43.807 141.0 388440.0 25 0 28274.0 + 2263 AQFPNGPQF 9 103 503.24309251444816 1004.4716320956964 2 503.2434265017509 MULTI CID FTMS 0 0 0 8220 205274.734375 0.657542544673321 5 -0.4165840148925781 5 Unmodified _AQFPNGPQF_ ENSG00000134375|ENST00000367287|TIMM17A;ENST00000482943.1_1_1:201932715-201938679:+|nuORF 28.486842064014134 0.1687311288560894 5 [QA]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4 5 21.704 0.0 0.0 2.1608 0.0 0.0 0.0 508.22145444360575 508.22145444360575 7.100278688931105 0.0 0.0 0.0 0 0.5 0.0 0.0 0.7742275032520141 [QA]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.1608 - 96 1 2.088 47725.0 1.0 3875 4348 8220 SUDHL4_400M_050219_1,8225 SUDHL4_400M_050219_1,8225,AQFPNGPQF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8226 43.82 800.0 226350.0 25 0 18572.0 + 30858 RIMDPDVITGY 11 134 640.3214772631911 1278.6284015931822 2 640.3214599490166 MULTI CID FTMS 0 0 0 8220 170170.25 0.3346787397594887 -2 0.1122703552246093 6 Unmodified _RIMDPDVITGY_ ENSG00000062822|ENST00000440232|POLD1 69.33821966488729 0.0343223916712224 5 {[SA]|[TG]}Y[YR]SV{I|L}TGY 11 6 + 76.793 0.0 0.0 6.0059 6.0059 83.888 0.0 0.0 0.0 3.004789843820234 11.588035503660706 3.004789843820234 3.004789843820234 0 1.7614393726401687 1.0457574905606752 0.8494850021680094 0.3807196863200844 {[SA]|[TG]}Y[YR]SV{I|L}TGY;[{I|L}T][VS]D[DP]V{I|L}TGY;[{I|L}T][VS][HC]SV{I|L}TGY;[HT]T{I|L}VS{[MG]|[TS]}{I|L}TGY;[{I|L}T][HT]{[MG]|[TS]}SV{I|L}TGY;[VP]GH{[{M(Oxidation (M))|F}C]|[YS]}SV{I|L}TGY;{[SA]|[TG]}Y[YR]SV{I|L}GTY;[HT]T{I|L}{[CT]|[{M(Oxidation (M))|F}G]}AV{I|L}TGY;[{I|L}T][VS]D[DP]V{I|L}GTY;[VP]G[MN][QT]V{I|L}TGY 6.0059;5.7709;5.3;5.0996;5.0246;4.9685;4.9095;4.873;4.6745;4.568 -;-;-;-;-;-;-;-;-;- 1445 1 2.088 143419.5 0.7799999713897705 3876 4348 8220 SUDHL4_400M_050219_1,8226 SUDHL4_400M_050219_1,8226,RIMDPDVITGY True True RIMDPDVITGY 43.820457 640.321459949017 7191288.0 8220.0 ENSG00000062822|ENST00000440232|POLD1 7.591504732767741 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8227 43.834 800.0 256880.0 25 0 43556.0 + 42069 VQVRPQARR 9 192 555.3353274803137 1108.656102027427 2 556.2987548708916 MULTI CID FTMS 0 0 0 8220 41216.91796875 1.0 0 0.0 7 Unmodified _VQVRPQARR_ REV__ENSG00000092200|ENST00000400017|RPGRIP1 4.3292370932331545 0.7635526921153418 5 GYV[K{I|L}]YG{M(Oxidation (M))|F} 8 -1 32.74 0.0 0.0 2.9531 0.0 0.0 163.15545960933656 0.0 163.15545960933656 0.0 20.750481569446748 0.0 0.0 0 0.0 0.0 0.0 0.0 GYV[K{I|L}]YG{M(Oxidation (M))|F} 2.9531 - 471 + 1 2.088 155595.6 0.6100000143051147 3877 4348 8220 SUDHL4_400M_050219_1,8227 SUDHL4_400M_050219_1,8227,VQVRPQARR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8228 43.848 800.0 152740.0 25 0 12208.0 + 41989 VQNPALTAL 9 169 463.76826052534193 925.521968117484 2 463.7690307497978 MULTI CID FTMS 0 0 0 8220 86793.2890625 0.9668706491198936 2 -0.2081222534179687 8 Unmodified _VQNPALTAL_ ENSG00000198911|ENST00000361204|SREBF2 21.74664581756881 0.2544899275067181 5 [{I|L}A]PNN{I|L} 6 7 20.746 0.0 0.0 2.2416 0.0 0.0 0.0 300.1543893423464 300.1543893423464 2.5584540598155634 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.25 [{I|L}A]PNN{I|L} 2.2416 - 415 1 2.088 94545.7 0.4600000083446502 3878 4348 8220 SUDHL4_400M_050219_1,8228 SUDHL4_400M_050219_1,8228,VQNPALTAL False True VQNPALTAL 43.848103 463.769030749798 985802.0 8220.0 ENSG00000198911|ENST00000361204|SREBF2 5.195525487263997 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8229 43.859 652.0 181120.0 25 0 10043.0 -1 0 129 973.7895433868792 2918.346800760837 3 974.1243774294852 MULTI CID FTMS 0 0 0 8220 418243.90625 1.0 0 0.0 9 5 [NP]TST{[RE]|[WV]}HDYVWNQS{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}D[PS]QS{[QS]|[NT]} 25 -1 [NP]TST{[RE]|[WV]}HDY + + 45.17 14.245 1.1865 1.5478 1.5478 52.658 0.0 0.0 0.0 0.0 14.607084796133451 0.0 0.0 0 0.2887254899964357 0.0 1.0 1.1549471895720984 [NP]TST{[RE]|[WV]}HDYVWNQS{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}D[PS]QS{[QS]|[NT]} 1.5478 - 4771 + 1 2.088 83116.7 1.0 3879 4348 8220 SUDHL4_400M_050219_1,8229 SUDHL4_400M_050219_1,8229, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8230 43.866 361.0 322970.0 25 0 57031.0 + 23247 LSTVVAIAQYL 11 134 589.34291497251 1176.67127701182 2 589.3435546755791 MULTI CID FTMS 0 0 0 8220 215969.53125 0.1823756224393352 -9 0.2563018798828125 10 Unmodified _LSTVVAIAQYL_ REV__ENSG00000133138|ENST00000357242|TBC1D8B 8.745405648335112 0.8338865417133445 5 H 1 -1 8.4949 0.0 0.0 0.72194 0.0 0.0 1021.6041668817404 0.0 1021.6041668817404 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.72194 - 188 + 1 2.088 92362.1 1.0 3880 4348 8220 SUDHL4_400M_050219_1,8230 SUDHL4_400M_050219_1,8230,LSTVVAIAQYL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8231 43.881 800.0 126370.0 25 0 19810.0 -1 0 110 893.9420975059064 1785.8696420786127 2 893.9440185427666 MULTI CID FTMS 0 0 0 8220 112415.65625 1.0 0 0.0 11 5 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEEQ 9 -1 69.887 0.0 0.0 3.9134 0.0 0.0 0.0 731.3510836236936 731.3510836236936 36.54947189572098 0.0 0.0 0.0 0 1.1677353201839438 2.0 0.6861818737241735 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEEQ 3.9134 - 939 + 1 2.088 72382.4 0.6700000166893005 3881 4348 8220 SUDHL4_400M_050219_1,8231 SUDHL4_400M_050219_1,8231, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8233 43.886 22.0 2086000.0 25 0 376170.0 -1 LLRAGGVMVM 10 72 531.7952561909873 0 531.7953369021416 PEAK CID FTMS 0 0 0 8232 522739.34375 0.5077802332861828 1 -0.1192588806152343 1 Oxidation (M) _LLRAGGVMVM(Oxidation (M))_ ENSG00000130382|ENST00000252674|MLLT1 7.289230182591677 0.3953776778296116 5 {I|L}DEA{I|L}Y 6 -1 22.115 0.0 0.0 2.0833 0.0 0.0 112.06321725296478 242.1517122858032 354.21492953876793 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DEA{I|L}Y 2.0833 - 83 + 1 2.079 44161.3 1.0 3882 4349 8232 SUDHL4_400M_050219_1,8233 SUDHL4_400M_050219_1,8233,LLRAGGVMVM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8234 43.888 65.0 813720.0 25 0 142910.0 + -1 VRKVQFPIM 9 73 567.3298300720465 1132.645107210893 2 567.3298828005791 MULTI CID FTMS 0 0 0 8232 571341.5 0.423124366514394 4 -0.3277206420898437 2 Oxidation (M) _VRKVQFPIM(Oxidation (M))_ REV__ENST00000509330.5_1_6:64394512-64394560:+|nuORF 2.302733041254933 0.8342969208511092 5 R 1 -1 3.4949 0.0 0.0 0.30856 0.0 0.0 670.3978365583524 303.12803064517817 973.5258672035308 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.30856 + + 10 + 1 2.079 46343.6 1.0 3883 4349 8232 SUDHL4_400M_050219_1,8234 SUDHL4_400M_050219_1,8234,VRKVQFPIM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8235 43.889 63.0 659480.0 25 0 105820.0 + 41916 VQGGHALRRL 10 69 553.8303356439183 1105.6461183546364 2 553.8314697146416 MULTI CID FTMS 0 0 0 8232 820993.0625 0.6469656826525738 -1 0.0888633728027343 3 Unmodified _VQGGHALRRL_ REV__ENSG00000088833|ENST00000216879|NSFL1C;REV__nc|ENSG00000088833|Q9UNZ2-4|NSFL1C;REV__nc|ENSG00000088833|Q9UNZ2-5|NSFL1C;REV__nc|ENSG00000088833|Q9UNZ2-6|NSFL1C 1.4819007175156935 0.719781833666733 5 {I|L} 1 -1 4.6041 0.0 0.0 0.41642 0.0 0.0 857.4929333954552 132.04575525455314 989.5386886500085 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.41642 + + 11 + 1 2.079 37357.8 1.0 3884 4349 8232 SUDHL4_400M_050219_1,8235 SUDHL4_400M_050219_1,8235,VQGGHALRRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8236 43.891 89.0 553500.0 25 0 97053.0 + 26855 PAVERRPA 8 77 448.25855070157616 894.5025484699523 2 448.2589294314384 MULTI CID FTMS 0 0 0 8232 562520.125 0.644829185128421 -1 0.0888633728027343 4 Unmodified _PAVERRPA_ REV__ENSG00000067182|ENST00000162749|TNFRSF1A;REV__ENST00000536717.5_1_12:6438480-6440154:-|nuORF;REV__nc|ENSG00000067182|P19438-2|TNFRSF1A;REV__nc|ENSG00000067182|P19438-3|TNFRSF1A 2.889219685676258 0.8067950007271085 5 {I|L} 1 -1 10.181 0.0 0.0 1.1382 0.0 0.0 763.4073774267868 0.0 763.4073774267868 0.0 7.962573367108659 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1382 - 11 + 1 2.079 44583.4 1.0 3885 4349 8232 SUDHL4_400M_050219_1,8236 SUDHL4_400M_050219_1,8236,PAVERRPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8237 43.892 47.0 631650.0 25 0 69947.0 + + 8831 KQYGNEVFL 9 60 549.284735448133 1096.554917963066 2 549.2831298708916 MULTI CID FTMS 0 0 0 8232 547196.4375 0.4145382805526531 -1 0.0888633728027343 5 Unmodified _EYQIWVFI_ ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8 21.74664581756881 0.5868176546531598 5 N[YG]{[WN]|[YH]}V{M(Oxidation (M))|F}{I|L} 8 -1 37.44 0.0 0.0 3.4143 0.0 0.0 85.08995253730625 0.0 85.08995253730625 0.0 30.450397039808763 0.0 0.0 0 0.805462187404089 0.0 0.0 0.8494850021680094 N[YG]{[WN]|[YH]}V{M(Oxidation (M))|F}{I|L} 3.4143 - 36 1 2.079 29371.0 1.0 3886 4349 8232 SUDHL4_400M_050219_1,8237 SUDHL4_400M_050219_1,8237,EYQIWVFI False False KQYGNEVFL 43.892311 549.283129870892 17403944.0 8232.0 ENST00000484403.5_1_21:30439206-30445917:-|nuORF;;nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 3.3402825196584067 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8238 43.894 54.0 676030.0 25 0 106960.0 + 27344 PHSSPLALL 9 71 467.7715667304769 933.5285805277538 2 467.7717773318291 MULTI CID FTMS 0 0 0 8232 498253.21875 0.0291631934693364 -3 0.2011337280273437 6 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 12.531546534597751 0.4974689918368763 5 {I|L}{I|L} 2 7 19.949 0.0 0.0 2.1369 0.0 0.0 689.3492420041194 0.0 689.3492420041194 0.0 11.60985695904947 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 2.1369 + + 56 + 1 2.079 31629.9 1.0 3887 4349 8232 SUDHL4_400M_050219_1,8238 SUDHL4_400M_050219_1,8238,PHSSPLALL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8239 43.897 182.0 334910.0 25 0 26680.0 -1 0 67 964.117277722814 2889.3300037686417 3 964.7805663943292 MULTI CID FTMS 0 0 0 8232 448285.03125 1.0 0 0.0 7 5 {I|L}[NP]{[QN]|[E{I|L}]|[KN]} 5 -1 8.34 0.0 0.0 0.28865 0.0 0.0 2305.0566300235178 0.0 2305.0566300235178 0.0 0.1401436180012183 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}[NP]{[QN]|[E{I|L}]|[KN]} 0.28865 - 204 1 2.079 52888.8 1.0 3888 4349 8232 SUDHL4_400M_050219_1,8239 SUDHL4_400M_050219_1,8239, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8240 43.901 204.0 251650.0 25 0 18760.0 -1 LILMLCSSA 9 86 512.265759598951 1022.516966264702 2 512.2657348513603 MULTI CID FTMS 0 0 0 8232 354899.1875 0.7065263191423669 1 -0.1192588806152343 8 Carbamidomethyl (C),Oxidation (M) _LILM(Oxidation (M))LC(Carbamidomethyl (C))SSA_ ENST00000587250.3_1_17:41178007-41180165:+|nuORF 18.13498045792455 0.3457906370836843 5 SSA 3 -1 20.97 0.0 0.0 2.0508 0.0 0.0 759.4046748602083 0.0 759.4046748602083 0.0 2.782157066534161 0.0 0.0 0 0.3807196863200844 0.0 0.5114393726401688 0.0 SSA 2.0508 + + 64 + 1 2.079 45997.5 1.0 3889 4349 8232 SUDHL4_400M_050219_1,8240 SUDHL4_400M_050219_1,8240,LILMLCSSA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8241 43.904 154.0 492810.0 25 0 78277.0 + 31619 RRAGPALA 8 89 406.2484267149688 810.4823004967376 2 406.2483093142509 MULTI CID FTMS 0 0 0 8232 282192.21875 0.0362513524780094 23 -2.014934539794922 9 Unmodified _RRAGPALA_ REV__ENST00000281961.2_1_2:39893203-39931290:+|nuORF 0.7936320650641473 0.8195151834710337 5 N[RV] 3 -1 5.0617 0.0 0.0 0.62453 0.0 0.0 423.2748962656572 0.0 423.2748962656572 0.0 1.962724883926656 0.0 0.0 0 0.0 0.0 0.0 0.0 N[RV] 0.62453 - 12 + 1 2.079 67424.7 1.0 3890 4349 8232 SUDHL4_400M_050219_1,8241 SUDHL4_400M_050219_1,8241,RRAGPALA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8242 43.911 395.0 328110.0 25 0 33581.0 + + 20094 KLAEKLTIL 9 135 514.8393849907104 1027.6642170482207 2 514.8394653201103 MULTI CID FTMS 0 0 0 8232 279492.53125 0.3331680238361568 -1 0.0888633728027343 10 Unmodified _LKAETIKLI_ nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENSG00000061676|ENST00000361354|NCKAP1;ENST00000547500.1_1_12:54891564-54894436:+|nuORF;ENSG00000123338|ENST00000293373|NCKAP1L 76.82478488871298 0.0184607444814265 5 [{I|L}T]{I|L}N{I|L}TK{I|L}{I|L} 9 -1 + 84.588 0.0 0.0 8.2311 8.2311 85.727 0.0 0.0 0.0 2.211804555060354 14.09256854528806 2.211804555060354 0.8460550734051111 0 1.079689690656103 2.0 2.172976336989421 0.0 [{I|L}T]{I|L}N{I|L}TK{I|L}{I|L};[{I|L}T]N{I|L}{I|L}TK{I|L}{I|L};[{I|L}T]{I|L}NT{I|L}K{I|L}{I|L};[{I|L}A]KE{I|L}TK{I|L}{I|L};[{I|L}T]N{I|L}T{I|L}K{I|L}{I|L};[{I|L}A]KET{I|L}K{I|L}{I|L};[{I|L}T]{I|L}N{I|L}KT{I|L}{I|L};[{I|L}T]{I|L}NK{I|L}T{I|L}{I|L};[{I|L}T]N{I|L}{I|L}KT{I|L}{I|L};[{I|L}T]N{I|L}K{I|L}T{I|L}{I|L} 8.2311;8.1488;8.063;8.0159;7.9807;7.8478;7.7364;7.6746;7.6541;7.5923 -;-;-;-;-;-;-;-;-;- 4197 1 2.079 102795.6 1.0 3891 4349 8232 SUDHL4_400M_050219_1,8242 SUDHL4_400M_050219_1,8242,LKAETIKLI False False KLAEKLTIL 43.911286 514.83946532011 5120768.0 8232.0 nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;;ENSG00000061676|ENST00000361354|NCKAP1;;ENST00000547500.1_1_12:54891564-54894436:+|nuORF;;ENSG00000123338|ENST00000293373|NCKAP1L 3.6495729287465415 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8243 43.915 218.0 318020.0 25 0 58934.0 31794 RSRGLVQP 8 92 456.7724697168891 0 456.7723571658134 PEAK CID FTMS 0 0 0 8232 247649.96875 0.5083553284110033 -1 0.0888633728027343 11 Unmodified _RSRGLVQP_ ENST00000368874.8_2_1:151299811-151300171:-|nuORF 2.302733041254933 0.5920993303473642 5 N 1 8 6.3515 0.0 0.0 0.6968 0.0 0.0 455.2963909945219 339.16864954166255 794.4650405361845 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 N 0.6968 - 5 + 1 2.079 60386.4 1.0 3892 4349 8232 SUDHL4_400M_050219_1,8243 SUDHL4_400M_050219_1,8243,RSRGLVQP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8244 43.918 132.0 235480.0 25 0 13895.0 + 42594 VTRLEAQAV 9 66 493.7845596749932 985.5545664167864 2 494.2830383181572 MULTI CID FTMS 0 0 0 8232 209383.890625 0.2123958092218851 26 -2.0883331298828125 12 Unmodified _VTRLEAQAV_ REV__ENSG00000160959|ENST00000292524|LRRC14 7.910154910731844 0.6385446671287552 5 V 1 -1 11.99 0.0 0.0 1.2165 0.0 0.0 868.4750966675662 0.0 868.4750966675662 0.0 1.901056208558032 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2165 + + 20 + 1 2.079 29722.2 1.0 3893 4349 8232 SUDHL4_400M_050219_1,8244 SUDHL4_400M_050219_1,8244,VTRLEAQAV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8245 43.932 800.0 192930.0 25 0 15900.0 + 17848 KQLDDLKVEL 10 173 600.8454683925735 1199.6763838519469 2 600.8452636599541 MULTI CID FTMS 0 0 0 8232 191337.953125 1.0 0 0.0 13 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 90.96430476242004 0.0092644755216884 5 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L} 10 4 + 75.936 0.0 0.0 6.3297 6.3297 81.978 0.0 0.0 0.0 2.6542143172527943 16.381912497585333 2.6542143172527943 0.813995467886798 0 1.4982338359054168 1.5228787452803376 0.7134679910804405 0.7198565171985376 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}VSRQKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}SRQKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}DKQ{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}VS[NG]{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}S[NG]{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}VA[TA]QKVE{I|L};{[TV]|[{I|L}S]}[VG]QD{I|L}KVE{I|L};{[QN]|[E{I|L}]|[KN]}QTQ{I|L}KVE{I|L} 6.3297;6.2619;6.1085;6.0468;5.953;5.8994;5.8377;5.7423;5.7126;5.683 -;-;-;-;-;-;-;-;-;- 10743 1 2.079 113455.1 0.8100000023841858 3894 4349 8232 SUDHL4_400M_050219_1,8245 SUDHL4_400M_050219_1,8245,KQLDDLKVEL True True KQLDDLKVEL 43.931894 600.845263659954 1482115.625 8232.0 ENST00000487431.1_1_9:127620199-127623861:-|nuORF;;ENSG00000136942|ENST00000348462|RPL35;;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;;ENST00000495728.1_1_9:127623696-127624209:-|nuORF;;ENST00000450819.1_1_1:237144684-237145005:+|nuORF 4.732606410980225 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8246 43.934 109.0 290060.0 25 0 43628.0 -1 0 56 557.2815500650396 556.2742735984395 1 557.2819702029228 MULTI CID FTMS 0 0 0 8232 164373.5625 1.0 0 0.0 14 5 P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3 -1 7.4473 0.0 0.0 1.3388 0.0 0.0 197.0891062173833 0.0 197.0891062173833 0.0 1.962724883926656 0.0 0.0 0 0.0 0.0 0.0 0.0 P{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.3388 - 13 + 1 2.079 32953.9 1.0 3895 4349 8232 SUDHL4_400M_050219_1,8246 SUDHL4_400M_050219_1,8246, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8247 43.941 374.0 334570.0 25 0 48506.0 + 1588 ALLGDLTKA 9 122 451.2712787809721 900.5280046287443 2 451.2704345583916 MULTI CID FTMS 0 0 0 8232 157532.828125 0.3793225101462675 -1 0.0888633728027343 15 Unmodified _ALLGDLTKA_ ENSG00000083312|ENST00000337273|TNPO1;ENSG00000105576|ENST00000425528|TNPO2;ENST00000423641.1_1_10:86150999-86151317:+|nuORF;nc|ENSG00000083312|Q92973-2|TNPO1;nc|ENSG00000083312|Q92973-3|TNPO1;nc|ENSG00000105576|O14787-2|TNPO2 38.17557092003332 0.0854718145212029 5 [{I|L}A]{I|L}GD{I|L}T[KA] 9 0 + 60.13 0.0 0.0 6.6772 6.6772 93.603 0.0 0.0 0.0 36.65303876313054 10.884767769392738 10.884767769392738 13.187587626244124 0 0.805462187404089 2.0 0.0 0.5242275032520141 + + [{I|L}A]{I|L}GD{I|L}T[KA];[{I|L}A]{I|L}{[RE]|[WV]}T[KA];[{I|L}A]{[RE]|[WV]}{I|L}T[KA] 6.6772;5.2127;4.1214 +;-;- + 418 + 1 2.079 99405.5 1.0 3896 4349 8232 SUDHL4_400M_050219_1,8247 SUDHL4_400M_050219_1,8247,ALLGDLTKA True True ALLGDLTKA 43.940915 451.270434558392 2453509.75 8232.0 ENSG00000105576|ENST00000425528|TNPO2;;ENSG00000083312|ENST00000337273|TNPO1;;nc|ENSG00000083312|Q92973-3|TNPO1;;ENST00000423641.1_1_10:86150999-86151317:+|nuORF;;nc|ENSG00000105576|O14787-2|TNPO2;;nc|ENSG00000083312|Q92973-2|TNPO1 5.832008679707845 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8248 43.947 317.0 611620.0 25 0 74484.0 20869 LMKSLQVKSS 10 162 374.2172347694412 0 374.2157165408134 PEAK CID FTMS 0 0 0 8232 158749.578125 0.6019924224594964 -1 0.0888633728027343 16 Unmodified _LMKSLQVKSS_ ENSG00000132463|ENST00000254799|GRSF1;ENST00000505068.5_1_4:71691792-71705589:-|nuORF;nc|ENSG00000132463|Q12849-5|GRSF1 15.248480904072842 0.3349989633518451 5 M 1 9 6.9897 0.0 0.0 0.93643 0.0 0.0 126.14451262732844 486.2105806940063 612.3550933213347 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + M 0.93643 + + 63 + 1 2.079 155998.5 1.0 3897 4349 8232 SUDHL4_400M_050219_1,8248 SUDHL4_400M_050219_1,8248,LMKSLQVKSS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8249 43.962 800.0 164070.0 25 0 21756.0 + 31023 RLFQDEEIY 9 112 606.7989598727411 1211.583366812282 2 606.7986328005791 MULTI CID FTMS 0 0 0 8232 137478.53125 1.0 0 0.0 17 Unmodified _RLFQDEEIY_ ENSG00000132017|ENST00000254337|DCAF15 29.43715596616401 0.1566398223704148 5 [R{I|L}]{M(Oxidation (M))|F}QDEE{I|L}Y 9 0 + 63.223 0.0 0.0 5.2182 5.2182 87.707 0.0 0.0 0.0 2.922152515121219 50.03546648790554 2.922152515121219 9.208187539523747 0 1.0 0.0 0.0 0.7059771852360797 + + [R{I|L}]{M(Oxidation (M))|F}QDEE{I|L}Y;[R{I|L}]{M(Oxidation (M))|F}[AG]DEE{I|L}Y;[R{I|L}]{M(Oxidation (M))|F}[DG]AEE{I|L}Y;[R{I|L}]{M(Oxidation (M))|F}QDT[RN]Y;[R{I|L}]{M(Oxidation (M))|F}[AG]DT[RN]Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E[R{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Y;EED[R{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Y;[R{I|L}]{M(Oxidation (M))|F}[DG]AT[RN]Y;{[ES]|[DT]|[{I|L}C]}[WC(Carbamidomethyl (C))]{I|L}{I|L}E{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E[R{I|L}][Q{I|L}]{M(Oxidation (M))|F}Y 5.2182;4.4582;3.8159;3.2321;2.4721;2.4721;1.9973;1.8299;1.2671;1.2482 +;-;-;-;-;-;-;-;-;- + 277 1 2.079 97225.6 0.699999988079071 3898 4349 8232 SUDHL4_400M_050219_1,8249 SUDHL4_400M_050219_1,8249,RLFQDEEIY False True RLFQDEEIY 43.961677 606.798632800579 1191705.0 8232.0 ENSG00000132017|ENST00000254337|DCAF15 6.7266896565755205 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8250 43.976 800.0 121140.0 25 0 37785.0 + -1 QSLPPGLAV 9 90 880.9234941926695 1759.832435452139 2 881.9111205935478 MULTI CID FTMS 0 0 0 -1 0 18 ENSG00000172809|ENST00000311111|RPL38 5 VA{[SA]|[TG]}VA{I|L} 7 -1 23.104 0.0 0.0 1.3128 0.0 0.0 897.3365766198094 248.1041964166625 1145.440773036472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.0 VA{[SA]|[TG]}VA{I|L} 1.3128 - 811 + 1 2.079 69033.3 0.6700000166893005 3899 4349 8232 SUDHL4_400M_050219_1,8250 SUDHL4_400M_050219_1,8250, False False QSLPPGLAV 43.975527 881.911120593548 1836269.125 8232.0 ENSG00000172809|ENST00000311111|RPL38 4.961929480234782 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8251 43.986 575.0 272140.0 25 0 22662.0 + 12194 GQRLVYQF 8 175 505.7754041869136 1009.5362554406272 2 505.7754089236259 MULTI CID FTMS 0 0 0 8232 126591.359375 1.0 0 0.0 19 Unmodified _GQRLVYQF_ ENSG00000102034|ENST00000308167|ELF4;ENSG00000109381|ENST00000686138|ELF2;ENSG00000120690|ENST00000239882|ELF1;ENST00000404600.2_1_6:1514778-1515111:-|nuORF;nc|ENSG00000109381|Q15723-1|ELF2;nc|ENSG00000109381|Q15723-2|ELF2;nc|ENSG00000109381|Q15723-3|ELF2;nc|ENSG00000109381|Q15723-4|ELF2;nc|ENSG00000120690|P32519-2|ELF1 15.847184025352805 0.6768015514314958 5 {I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}V]Q{M(Oxidation (M))|F} 8 5 + 35.367 0.0 0.0 3.5033 3.5033 78.96 0.0 0.0 0.0 4.953808252067194 4.953808252067194 4.953808252067194 4.953808252067194 0 0.7742275032520141 2.0 0.0 0.0 {I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}V]Q{M(Oxidation (M))|F};[QP]VDVEPKV;{I|L}{I|L}[DV][Y{I|L}]Q{M(Oxidation (M))|F};{I|L}{I|L}[HQ][QP]Q{M(Oxidation (M))|F};{[QG]|[NA]}RY[{I|L}V]Q{M(Oxidation (M))|F};[{I|L}V][YE][{I|L}V]Q{M(Oxidation (M))|F};[KP]E[KA]YQ{M(Oxidation (M))|F};{[QG]|[NA]}R[{I|L}V]YQ{M(Oxidation (M))|F};[Q{I|L}]RRYQ{M(Oxidation (M))|F};[{I|L}V]{NN|[MP]|[D{I|L}]|[EV]}[Y{I|L}]Q{M(Oxidation (M))|F} 3.5033;3.0126;2.8418;2.6884;1.7322;1.7209;1.6647;1.4352;1.0804;1.0595 -;-;-;-;-;-;-;+;-;- + 1134 1 2.079 119972.8 1.0 3900 4349 8232 SUDHL4_400M_050219_1,8251 SUDHL4_400M_050219_1,8251,GQRLVYQF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8252 44.001 800.0 148460.0 25 0 19847.0 + 22277 LPRRSKFYK 9 136 597.8564939889404 1193.6984350446808 2 597.8569213747978 MULTI CID FTMS 0 0 0 8232 114560.9375 0.1838687065236864 -8 0.3258056640625 20 Unmodified _LPRRSKFYK_ REV__ENSG00000127774|ENST00000248378|EMC6 4.75600775471527 0.7486543447549536 5 [{I|L}P]G 3 -1 14.771 0.0 0.0 1.2374 0.0 0.0 0.0 923.516586250012 923.516586250012 6.047166874269616 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [{I|L}P]G 1.2374 - 159 1 2.079 94357.5 0.6200000047683716 3901 4349 8232 SUDHL4_400M_050219_1,8252 SUDHL4_400M_050219_1,8252,LPRRSKFYK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8254 44.006 87.0 527590.0 25 0 35139.0 -1 0 68 959.1136224825236 2874.319038047771 3 959.4481689333916 MULTI CID FTMS 0 0 0 8253 967919.75 0.7116994188286574 2 -0.1636009216308593 1 5 [MN]P 3 -1 30.458 0.0 0.0 1.0596 0.0 0.0 0.0 2529.1668432664023 2529.1668432664023 6.020599913279625 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MN]P 1.0596 - 168 + 1 2.069 39681.9 1.0 3902 4350 8253 SUDHL4_400M_050219_1,8254 SUDHL4_400M_050219_1,8254, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8255 44.008 88.0 571040.0 25 0 82841.0 + 14897 ILLENFSAEK 10 68 582.3196000498903 1162.6246471665804 2 582.3192626833916 MULTI CID FTMS 0 0 0 8253 484087.53125 0.4120148543223789 2 -0.1636009216308593 2 Unmodified _ILLENFSAEK_ ENST00000560979.1_1_15:49715501-49715549:+|nuORF 24.881564428377168 0.4096545554397951 5 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}S 7 3 72.951 0.0 0.0 6.2747 0.0 0.0 0.0 343.1628512018188 343.1628512018188 50.2751076100089 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}S 6.2747 + + 70 + 1 2.069 45713.3 1.0 3903 4350 8253 SUDHL4_400M_050219_1,8255 SUDHL4_400M_050219_1,8255,ILLENFSAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8256 44.009 43.0 1239800.0 25 0 211350.0 + 26586 NVPDVYTQI 9 70 524.7690179284853 1047.5234829237704 2 524.7694579958916 MULTI CID FTMS 0 0 0 8253 1129238.75 0.776107039577472 -1 0.1192588806152343 3 Unmodified _NVPDVYTQI_ ENSG00000144451|ENST00000331683|SPAG16;ENST00000414961.2_1_2:214162027-214228821:+|nuORF;nc|ENSG00000144451|Q8N0X2-3|SPAG16;nc|ENSG00000144451|Q8N0X2-4|SPAG16;nc|ENSG00000144451|Q8N0X2-5|SPAG16 22.736283301280096 0.2418982879461534 5 [DP]VYTQ 6 3 28.121 0.0 0.0 2.6846 0.0 0.0 0.0 341.1818763532655 341.1818763532655 3.524459091530403 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 + [DP]VYTQ 2.6846 + + 192 1 2.069 49076.9 1.0 3904 4350 8253 SUDHL4_400M_050219_1,8256 SUDHL4_400M_050219_1,8256,NVPDVYTQI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8257 44.011 79.0 720820.0 25 0 64231.0 + 13410 HLLNESPML 9 73 527.2728207230743 1052.5310885129486 2 527.2734863162041 MULTI CID FTMS 0 0 0 8253 647262.125 0.5744776073866362 -1 0.1192588806152343 4 Unmodified _HLLNESPML_ ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 49.55428908609986 0.0413471690215031 5 [H{I|L}]{I|L}NESPM{I|L} 9 0 + 58.562 0.0 0.0 5.5639 5.5639 83.747 0.0 0.0 0.0 3.802112417116064 18.64007808576609 3.802112417116064 3.802112417116064 0 1.1677353201839438 1.3010299956639813 0.5 0.0 + + [H{I|L}]{I|L}NESPM{I|L};{I|L}{I|L}HNESPM{I|L};[H{I|L}]{I|L}GGESPM{I|L};{I|L}{I|L}HGGESPM{I|L};[H{I|L}]{I|L}NE[WE]{I|L};{I|L}{I|L}HNE[WE]{I|L};[H{I|L}]{I|L}GGE[WE]{I|L};{I|L}{I|L}HGGE[WE]{I|L} 5.5639;5.2026;4.689;4.3278;4.0534;3.6922;3.1735;2.8122 +;-;-;-;-;-;-;- + 142 1 2.069 56392.1 1.0 3905 4350 8253 SUDHL4_400M_050219_1,8257 SUDHL4_400M_050219_1,8257,HLLNESPML True True HLLNESPML 44.011229 527.273486316204 6533027.5 8253.0 ENSG00000155561|ENST00000285968|NUP205;;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 8.302928765614828 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8258 44.013 105.0 790550.0 25 0 35287.0 -1 0 79 864.909235177304 1727.803917421408 2 864.9100829958916 MULTI CID FTMS 0 0 0 8253 553534.375 0.5642767944748143 -1 0.1192588806152343 5 5 [MN]PN{I|L}NEAQKVDD{I|L}Q 15 -1 + 107.28 0.0 0.0 6.2092 6.2092 89.212 0.0 0.0 0.0 13.666280273229177 12.525749891599531 12.525749891599531 9.030899869919438 0 1.6549471895720984 1.5228787452803376 0.0 1.548455006504028 [MN]PN{I|L}NEAQKVDD{I|L}Q;[MN]PN{I|L}GGEAQKVDD{I|L}Q;[MN]PGG{I|L}NEAQKVDD{I|L}Q;[MN]PN{I|L}NEA[AG]KVDD{I|L}Q;[MN]P{M(Oxidation (M))|F}VKQAEN{I|L}[Y{M(Oxidation (M))|F}]K;[MN]P{M(Oxidation (M))|F}VKQAEGG{I|L}[Y{M(Oxidation (M))|F}]K;[MN]P{M(Oxidation (M))|F}VK[AG]AEN{I|L}[Y{M(Oxidation (M))|F}]K;[NP]M{M(Oxidation (M))|F}VKQAEN{I|L}[Y{M(Oxidation (M))|F}]K;[MN]P{M(Oxidation (M))|F}VKQAEN{I|L}{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]P{M(Oxidation (M))|F}VKQAEN[HT]{[QG]|[NA]}K 6.2092;5.6865;5.6865;5.6865;5.4183;4.8945;4.8945;4.8823;4.7202;4.6922 -;-;-;-;-;-;-;-;-;- 1293 + 1 2.069 62840.2 1.0 3906 4350 8253 SUDHL4_400M_050219_1,8258 SUDHL4_400M_050219_1,8258, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8259 44.016 149.0 641680.0 25 0 88146.0 + 13254 HIIENIVAV 9 93 504.29792098657487 1006.5812890399498 2 504.2976562380791 MULTI CID FTMS 0 0 0 8253 497625.5 0.0820425402405787 -3 0.2697906494140625 6 Unmodified _HIIENIVAV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 64.23631603340823 0.0237365939569086 5 [H{I|L}]{I|L}EN{I|L}VAV 9 0 + 72.999 0.0 0.0 7.2521 7.2521 94.694 0.0 0.0 0.0 22.37643016799588 56.80069055257668 22.37643016799588 12.88241865052136 0 1.079689690656103 1.5228787452803376 0.3807196863200844 0.7302046884880937 + + [H{I|L}]{I|L}EN{I|L}VAV;[H{I|L}]{I|L}ENV{I|L}AV;[H{I|L}]{I|L}EGG{I|L}VAV;[H{I|L}]{I|L}EGGV{I|L}AV;{[QN]|[E{I|L}]|[KN]}N{I|L}H{I|L}VAV;{[VA]|[{I|L}G]}{[DA]|[EG]}{I|L}H{I|L}VAV;{[QN]|[E{I|L}]|[KN]}NH{I|L}{I|L}VAV;[H{I|L}][RP]C{I|L}[R{I|L}];{[VA]|[{I|L}G]}{[DA]|[EG]}H{I|L}{I|L}VAV;{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}H{I|L}VAV 7.2521;5.9723;5.6119;4.7103;4.3294;4.2021;4.0758;4.0215;3.9484;3.7688 +;-;-;-;-;-;-;-;-;- + 327 1 2.069 75620.8 1.0 3907 4350 8253 SUDHL4_400M_050219_1,8259 SUDHL4_400M_050219_1,8259,HIIENIVAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8260 44.02 199.0 528850.0 25 0 69867.0 + 34386 SLTVDNLSLKL 11 105 401.5709053756734 1201.6908867272202 3 401.5711547732353 MULTI CID FTMS 0 0 0 8253 378000.4375 1.0 0 0.0 7 Unmodified _SLTVDNLSLKL_ REV__ENSG00000181544|ENST00000650831|FANCB 23.015651743759182 0.551788120787869 5 {[TV]|[{I|L}S]}{I|L}DDKE 7 -1 57.144 0.0 0.0 4.7553 0.0 0.0 0.0 398.28379236392817 398.28379236392817 34.3873645296195 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7134679910804405 0.3807196863200844 {[TV]|[{I|L}S]}{I|L}DDKE 4.7553 - 406 + 1 2.069 86424.7 1.0 3908 4350 8253 SUDHL4_400M_050219_1,8260 SUDHL4_400M_050219_1,8260,SLTVDNLSLKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8261 44.024 165.0 407200.0 25 0 25554.0 + 17389 KMIEDLQNEL 10 109 616.8133756596112 1231.6121983860223 2 616.8134643435478 MULTI CID FTMS 0 0 0 8253 355807.0625 0.705612625019475 -1 0.1192588806152343 8 Unmodified _KMIEDLQNEL_ ENSG00000198887|ENST00000361138|SMC5 110.5527297667825 0.0023234913804031 5 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QNE{I|L} 10 0 + 97.902 0.0 0.0 7.9491 7.9491 93.233 0.0 0.0 0.0 10.424555285655757 38.19425777347298 10.424555285655757 9.164539485499247 0 0.6549471895720985 0.0 1.5044321917401078 2.118221472090049 + + {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QNE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}[AG]NE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}QGGE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}ED{I|L}[AG]GGE{I|L};[{I|L}T]{[WT]|[RM]}D{I|L}QNE{I|L};[Q{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}QNE{I|L};[AG]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}QNE{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}ENE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}QNE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{I|L}{I|L}EME{I|L} 7.9491;7.205;7.205;6.4638;6.1687;6.0608;5.9144;5.7944;5.7197;5.6828 +;-;-;-;-;-;-;-;-;- + 3250 1 2.069 56745.9 1.0 3909 4350 8253 SUDHL4_400M_050219_1,8261 SUDHL4_400M_050219_1,8261,KMIEDLQNEL True True KMIEDLQNEL 44.023508 616.813464343548 6692779.5 8253.0 ENSG00000198887|ENST00000361138|SMC5 4.9833119710286455 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8262 44.027 153.0 569080.0 25 0 59997.0 + 34187 SLNIITVTL 9 110 487.30012437302486 972.5856958128496 2 487.3002502322197 MULTI CID FTMS 0 0 0 8253 230842.75 0.0585008474779761 -3 0.2697906494140625 9 Unmodified _SLNIITVTL_ ENSG00000004975|ENST00000005340|DVL2;ENSG00000161202|ENST00000313143|DVL3;ENST00000478247.1_1_3:183882805-183888540:+|nuORF;ENST00000572285.5_1_17:7132676-7132733:-|nuORF;nc|ENSG00000161202|Q92997-2|DVL3 60.07390631473393 0.0260411565414776 5 {[TV]|[{I|L}S]}AVG{I|L}VTT{I|L} 10 5 + 66.112 0.0 0.0 6.7975 6.7975 82.924 0.0 0.0 0.0 3.9694793911926 16.53212513775344 3.9694793911926 0.5115252244738144 0 0.9247425010840048 1.3010299956639813 1.0189301784845295 0.0 {[TV]|[{I|L}S]}AVG{I|L}VTT{I|L};{[TV]|[{I|L}S]}{I|L}N{I|L}VTT{I|L};{[TV]|[{I|L}S]}AVG{I|L}TVT{I|L};{[TV]|[{I|L}S]}{I|L}GG{I|L}VTT{I|L};{[TV]|[{I|L}S]}{I|L}N{I|L}TVT{I|L};[{I|L}T]GVG{I|L}VTT{I|L};[{I|L}T]VN{I|L}VTT{I|L};{[TV]|[{I|L}S]}{I|L}GG{I|L}TVT{I|L};[{I|L}T]GVG{I|L}TVT{I|L};[{I|L}T]VGG{I|L}VTT{I|L} 6.7975;6.7449;6.5699;6.5476;6.5173;6.3894;6.3368;6.32;6.1618;6.1395 -;-;-;-;-;-;-;-;-;- 2040 1 2.069 71587.8 1.0 3910 4350 8253 SUDHL4_400M_050219_1,8262 SUDHL4_400M_050219_1,8262,SLNIITVTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8263 44.03 194.0 400860.0 25 0 48271.0 + -1 HRRWNCRWSRC 11 78 858.3976692439921 0 858.4011718630791 PEAK CID FTMS 0 0 0 8253 206414.6875 1.0 0 0.0 10 Acetyl (Protein N-term),2 Carbamidomethyl (C) _(Acetyl (Protein N-term))HRRWNC(Carbamidomethyl (C))RWSRC(Carbamidomethyl (C))_ REV__ENST00000563591.5_1_16:28857957-28875007:+|nuORF 0.0 0.4761840153648598 5 PD{I|L}{[WT]|[RM]}MTWD{I|L} 10 -1 35.17 0.0 0.0 2.051 0.0 0.0 245.0812453243917 208.0733584039672 453.1546037283589 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 PD{I|L}{[WT]|[RM]}MTWD{I|L} 2.051 - 549 + 1 2.069 57986.0 1.0 3911 4350 8253 SUDHL4_400M_050219_1,8263 SUDHL4_400M_050219_1,8263,HRRWNCRWSRC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8264 44.04 558.0 292470.0 25 0 27084.0 + 34013 TLWYRSPEV 9 178 575.8430149974589 1149.6714770617175 2 575.8431884646416 MULTI CID FTMS 0 0 0 8253 168144.875 0.3863092670526048 5 -0.3036537170410156 11 Unmodified _SLITLARYTL_ nc|ENSG00000170312|P06493-2|CDK1;ENSG00000170312|ENST00000395284|CDK1 13.042465956692816 0.6287021003332052 5 [{I|L}T]E[YR]SWV 8 7 29.72 0.0 0.0 2.5851 0.0 0.0 0.0 112.13849301314272 112.13849301314272 17.412873727093647 0.0 0.0 0.0 0 0.0 2.0 0.2887254899964357 0.0 [{I|L}T]E[YR]SWV 2.5851 - 1151 1 2.069 125119.3 1.0 3912 4350 8253 SUDHL4_400M_050219_1,8264 SUDHL4_400M_050219_1,8264,SLITLARYTL False False TLWYRSPEV 44.040083 575.843188464642 1053425.375 8253.0 nc|ENSG00000170312|P06493-2|CDK1;;ENSG00000170312|ENST00000395284|CDK1 4.848904609680176 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8265 44.049 513.0 190850.0 25 0 21492.0 38745 TVAFISFLLL 10 138 562.3437079064552 1122.6728628797102 2 562.3433105349541 MULTI CID FTMS 0 0 0 8253 147283.078125 0.3456095048253835 -5 0.3666343688964844 12 Unmodified _TVAFISFLLL_ ENSG00000212128|ENST00000390677|TAS2R13 3.5964929083625545 0.7100006075494749 5 [Y{I|L}]D{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D 7 7 30.545 0.0 0.0 2.7208 0.0 0.0 0.0 273.2231534025796 273.2231534025796 19.576214018601235 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}]D{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D 2.7208 - 121 1 2.069 75912.7 1.0 3913 4350 8253 SUDHL4_400M_050219_1,8265 SUDHL4_400M_050219_1,8265,TVAFISFLLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8266 44.063 800.0 196960.0 25 0 17657.0 + 14814 ILENPPEEMKL 11 150 656.8436041497923 1311.6726553663846 2 656.8402587771416 MULTI CID FTMS 0 0 0 8253 129032.1171875 0.5793033044198062 -1 0.1192588806152343 13 Unmodified _ILENPPEEMKL_ ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-2|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;nc|ENSG00000075151|O43432|EIF4G3 68.75988807550267 0.0359983986270074 5 {I|L}{I|L}ENWHEMK{I|L} 10 3 + 114.08 0.0 0.0 8.6975 8.6975 94.007 0.0 0.0 0.0 89.63936799083324 10.457574905606748 10.457574905606748 9.164539485499247 0 1.674742501084005 2.0 1.829689690656103 0.4247425010840047 {I|L}{I|L}ENWHEMK{I|L};{I|L}{I|L}EGGWHEMK{I|L};{I|L}{I|L}ENPPEEMK{I|L};{I|L}{I|L}ENWHE[KP]{M(Oxidation (M))|F};{I|L}{I|L}ENW{[QG]|[NA]}[DP]K{I|L};{I|L}{I|L}ENWH{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q;{I|L}{I|L}EGGPPEEMK{I|L};{I|L}{I|L}ENWH[VP]{[SA]|[TG]}{M(Oxidation (M))|F};{I|L}{I|L}EGGWHE[KP]{M(Oxidation (M))|F};{I|L}{I|L}ENPPEE[KP]{M(Oxidation (M))|F} 8.6975;7.9989;7.762;7.4164;7.1811;7.1082;7.0661;6.7177;6.7177;6.4809 -;-;+;-;-;-;-;-;-;- + 2286 + 1 2.069 120959.7 0.6800000071525574 3914 4350 8253 SUDHL4_400M_050219_1,8266 SUDHL4_400M_050219_1,8266,ILENPPEEMKL True True ILENPPEEMKL 44.062989 656.840258777142 1911318.625 8253.0 nc|ENSG00000075151|O43432|EIF4G3;;nc|ENSG00000075151|O43432-3|EIF4G3;;ENSG00000075151|ENST00000602326|EIF4G3;;nc|ENSG00000075151|O43432-2|EIF4G3 8.272422790527344 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8267 44.077 800.0 171190.0 25 0 34050.0 + 19015 LDKLTLRVAN 10 145 571.8484824101122 1141.6824118870245 2 571.8488036990166 MULTI CID FTMS 0 0 0 8253 116628.1015625 1.0 0 0.0 14 Unmodified _LDKLTLRVAN_ REV__ENSG00000104059|ENST00000261275|ENTREP2 6.2057823575117 0.6979311171683138 5 [Y{I|L}]N 3 -1 23.301 0.0 0.0 2.0409 0.0 0.0 0.0 748.4684280825899 748.4684280825899 11.880772802985806 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [Y{I|L}]N 2.0409 - 444 1 2.069 105370.5 0.6299999952316284 3915 4350 8253 SUDHL4_400M_050219_1,8267 SUDHL4_400M_050219_1,8267,LDKLTLRVAN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8268 44.085 433.0 169700.0 25 0 12884.0 + + -1 VLMDGSVKL 9 114 481.27405142586616 960.5335499185323 2 481.2734252810478 MULTI CID FTMS 0 0 0 8253 83804.2265625 1.0 0 0.0 15 Oxidation (M) _VLKPSAM(Oxidation (M))SL_ ENST00000588938.1_1_19:39086232-39087718:-|nuORF;nc|ENSG00000104814|Q92918|MAP4K1;ENSG00000104814|ENST00000396857|MAP4K1 21.74664581756881 0.2544899275067181 5 [{I|L}V]MH 4 -1 43.06 0.0 0.0 4.4829 0.0 0.0 0.0 477.2607297957113 477.2607297957113 28.723637474483468 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 [{I|L}V]MH 4.4829 - 118 + 1 2.069 62295.3 1.0 3916 4350 8253 SUDHL4_400M_050219_1,8268 SUDHL4_400M_050219_1,8268,VLKPSAMSL False False VLMDGSVKL 44.084522 481.273425281048 496478.84375 8253.0 ENST00000588938.1_1_19:39086232-39087718:-|nuORF;;nc|ENSG00000104814|Q92918|MAP4K1;;ENSG00000104814|ENST00000396857|MAP4K1 4.124868631362915 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8269 44.087 35.0 1376900.0 25 0 172510.0 23045 LSKTPSALAL 10 77 500.8057093581076 0 500.8058044314384 PEAK CID FTMS 0 0 0 8253 965362.125 1.0 0 0.0 16 Unmodified _LSKTPSALAL_ ENSG00000085741|ENST00000322563|WNT11 16.149105407346934 0.3281668441439271 5 V 1 10 6.9897 0.0 0.0 0.69925 0.0 0.0 815.4387522349667 82.06702600650624 897.505778241473 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.69925 - 214 + 1 2.069 42627.9 1.0 3917 4350 8253 SUDHL4_400M_050219_1,8269 SUDHL4_400M_050219_1,8269,LSKTPSALAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8270 44.101 787.0 429290.0 25 0 15669.0 -1 0 196 952.7766235714238 2855.308041314471 3 953.4446899294852 MULTI CID FTMS 0 0 0 8253 362381.40625 0.5272204814716375 -1 0.1192588806152343 17 5 [NP]TSANM{I|L}{I|L}VANPQS{I|L}QDDG[RV]SAD{[QD]|[EN]|[WG]|[KD]|[RS]} 27 -1 + 132.4 0.0 0.0 4.637 4.637 58.105 0.0 0.0 0.0 1.8447201759159668 6.399699876253777 1.8447201759159668 0.0 0 0.5924778212679485 0.0 3.504432191740108 1.8283409326844269 [NP]TSANM{I|L}{I|L}VANPQS{I|L}QDDG[RV]SAD{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSANM{I|L}{I|L}VANPQS{I|L}KDD[PS]QSAD{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSANM{I|L}{I|L}VANPQS{I|L}QDD[PS]QSAD{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSANM{I|L}{I|L}VANPQS{I|L}QDD[PS]KSAD{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSANM{I|L}{I|L}VANPQS{I|L}QDD[{I|L}A]QSAD{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSANM{I|L}{I|L}G{I|L}NPQS{I|L}QDD[PS]KSAD{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSANM{I|L}{I|L}G{I|L}NPQS{I|L}KDD[PS]QSAD{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSANM{I|L}{I|L}G{I|L}NPQS{I|L}QDDG[RV]SAD{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSANM{I|L}{I|L}G{I|L}NPQS{I|L}QDD[PS]QSAD{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]TSANM{I|L}{I|L}G{I|L}NPQS{I|L}QDD[{I|L}A]QSAD{[QD]|[EN]|[WG]|[KD]|[RS]} 4.637;4.637;4.637;4.637;4.637;4.6191;4.6191;4.6191;4.6191;4.6191 -;-;-;-;-;-;-;-;-;- 750000 1 2.069 228547.4 1.0 3918 4350 8253 SUDHL4_400M_050219_1,8270 SUDHL4_400M_050219_1,8270, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8271 44.115 800.0 414380.0 25 0 100890.0 -1 0 107 1178.1506521924373 3531.430127177512 3 1178.485644519329 MULTI CID FTMS 0 0 0 8253 311509.84375 0.3898220476351556 -2 0.2081222534179687 18 5 TH{M(Oxidation (M))|F}TVV{[ET]|[MV]}[{M(Oxidation (M))|F}T] 10 -1 22.929 0.0 0.0 0.64929 0.0 0.0 2350.829867586246 0.0 2350.829867586246 0.0 -3.819911470947165 -3.819911470947165 0.0 0 0.0 0.0 1.579689690656103 0.0 TH{M(Oxidation (M))|F}TVV{[ET]|[MV]}[{M(Oxidation (M))|F}T] 0.64929 - 2914 + 1 2.069 257241.6 0.800000011920929 3919 4350 8253 SUDHL4_400M_050219_1,8271 SUDHL4_400M_050219_1,8271, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8272 44.123 472.0 219390.0 25 0 19762.0 40847 VLNRSLFTGL 10 125 560.3280304658821 0 560.3276244997978 PEAK CID FTMS 0 0 0 8253 163385.3125 1.0 0 0.0 19 Unmodified _VLNRSLFTGL_ ENSG00000137857|ENST00000389037|DUOX1;ENSG00000140279|ENST00000389039|DUOX2;ENST00000561220.6_1_15:45434150-45457096:+|nuORF;nc|ENSG00000137857|Q9NRD9-2|DUOX1;nc|ENSG00000140279|Q9NRD8|DUOX2 10.823927491677226 0.3685635357628707 5 SA 2 9 11.013 0.0 0.0 0.98454 0.0 0.0 329.1848562425078 628.3685396783811 957.553395920889 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 SA 0.98454 - 30 + 1 2.069 80617.2 1.0 3920 4350 8253 SUDHL4_400M_050219_1,8272 SUDHL4_400M_050219_1,8272,VLNRSLFTGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8274 44.127 19.0 2422900.0 25 0 592260.0 30244 QWTSRKRK 8 62 545.3165761791628 1088.6185994251257 2 545.3170043826103 MULTI CID FTMS 0 0 0 8273 3180624.25 0.9642125301503588 1 -0.0414085388183593 1 Unmodified _QWTSRKRK_ ENST00000275820.3_1_7:156745216-156745255:+|nuORF 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.053 41815.5 1.0 3921 4351 8273 SUDHL4_400M_050219_1,8274 SUDHL4_400M_050219_1,8274,QWTSRKRK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8275 44.129 32.0 1557700.0 25 0 272940.0 20820 LLWQNLEK 8 62 522.2958170662661 1042.577081199332 2 522.2961303591728 MULTI CID FTMS 0 0 0 8273 1615521.125 0.826295454047059 1 -0.0414085388183593 2 Unmodified _LLWQNLEK_ ENSG00000134569|ENST00000378623|LRP4 2.577480529830294 0.808687252328423 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.053 46683.0 1.0 3922 4351 8273 SUDHL4_400M_050219_1,8275 SUDHL4_400M_050219_1,8275,LLWQNLEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8276 44.13 42.0 1346200.0 25 0 325250.0 + 42464 VTGLGPRR 8 63 428.26173283445326 854.5089127357065 2 428.2617370486259 MULTI CID FTMS 0 0 0 8273 1482551.375 0.2409735571365076 -4 0.3919830322265625 3 Unmodified _VTGLGPRR_ REV__ENSG00000134698|ENST00000373210|AGO4;REV__ENST00000252506.10_1_9:92221290-92221356:+|nuORF 0.6903765706972694 0.8201419426409876 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 7 1 2.053 52328.5 1.0 3923 4351 8273 SUDHL4_400M_050219_1,8276 SUDHL4_400M_050219_1,8276,VTGLGPRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8277 44.131 45.0 514110.0 25 0 53976.0 -1 VLNWMLRK 8 57 538.3089618742939 1074.6033708153875 2 538.3088256716728 MULTI CID FTMS 0 0 0 8273 1113973.5 0.7099629562917065 1 -0.0414085388183593 4 Oxidation (M) _VLNWM(Oxidation (M))LRK_ ENSG00000184261|ENST00000327876|KCNK12 2.577480529830294 0.808687252328423 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.053 24287.3 1.0 3924 4351 8273 SUDHL4_400M_050219_1,8277 SUDHL4_400M_050219_1,8277,VLNWMLRK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8278 44.132 41.0 1425000.0 25 0 165870.0 + 1366 ALAALVNDGR 10 95 500.2842498427383 998.5539467522766 2 500.2830383181572 MULTI CID FTMS 0 0 0 8273 889437.625 0.7705097361642059 -2 0.2414512634277343 5 Unmodified _ALAALVNDGR_ REV__LTR12D_dup385|chr12:47306151-47307510:+|2.6563698332509835|0.1645015026742518|4.01|48.0|26|3|sense 10.823927491677226 0.6659270209832991 5 {I|L} 1 -1 12.764 0.0 0.0 1.2783 0.0 0.0 867.4587146739548 0.0 867.4587146739548 0.0 1.654966095207122 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2783 + + 40 + 1 2.053 52469.4 1.0 3925 4351 8273 SUDHL4_400M_050219_1,8278 SUDHL4_400M_050219_1,8278,ALAALVNDGR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8279 44.134 55.0 1179600.0 25 0 219780.0 + 42993 VVVDPIQSV 9 82 478.27649867201706 954.538444410834 2 478.2769042849541 MULTI CID FTMS 0 0 0 8273 856614.25 0.695706332509568 -2 0.2414512634277343 6 Unmodified _VVVDPIQSV_ ENSG00000115233|ENST00000409682|PSMD14 52.268347100219714 0.0353964759249114 5 VV[DV]P{I|L} 6 3 27.681 0.0 0.0 2.9 0.0 0.0 0.0 329.14718399507166 329.14718399507166 7.380521827513526 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + VV[DV]P{I|L} 2.9 + + 185 1 2.053 57436.3 1.0 3926 4351 8273 SUDHL4_400M_050219_1,8279 SUDHL4_400M_050219_1,8279,VVVDPIQSV True True VVVDPIQSV 44.133562 478.276904284954 7285866.5 8273.0 ENSG00000115233|ENST00000409682|PSMD14 7.691445827484131 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8280 44.136 100.0 623930.0 25 0 126970.0 + 31226 RLRKGGVS 8 82 436.7749490625649 0 436.7750427126884 PEAK CID FTMS 0 0 0 8273 630593.5625 0.1881608336511153 -4 0.3919830322265625 7 Unmodified _RLRKGGVS_ REV__ENSG00000011405|ENST00000691414|PIK3C2A 0.6903765706972694 0.5983587967854751 5 A 1 -1 7.7423 0.0 0.0 0.88835 0.0 0.0 436.268268631186 361.20273767642817 797.4710063076142 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 A 0.88835 - 8 + 1 2.053 55150.3 1.0 3927 4351 8273 SUDHL4_400M_050219_1,8280 SUDHL4_400M_050219_1,8280,RLRKGGVS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8281 44.139 145.0 347420.0 25 0 65293.0 39763 VELSRRHPIA 10 71 589.34291497251 1176.67127701182 2 589.3427612185478 MULTI CID FTMS 0 0 0 8273 394786.875 0.3333780540351338 -6 0.4888267517089844 8 Unmodified _VELSRRHPIA_ ENSG00000072954|ENST00000187762|TMEM38A 7.289230182591677 0.6929195370588109 5 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F} 4 8 26.372 0.0 0.0 2.2412 0.0 0.0 0.0 727.430559808948 727.430559808948 21.76773560579572 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.2215141619232908 0.0 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F} 2.2412 - 27 1 2.053 41030.2 1.0 3928 4351 8273 SUDHL4_400M_050219_1,8281 SUDHL4_400M_050219_1,8281,VELSRRHPIA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8282 44.145 340.0 417710.0 25 0 46698.0 + 28181 PPVWDSDPYL 10 120 594.7826543764852 1187.5507558197703 2 594.7830688357353 MULTI CID FTMS 0 0 0 8273 380363.53125 0.9554580025395916 -1 0.1221923828125 9 Unmodified _PPVWDSDPYL_ REV__ENSG00000162775|ENST00000369784|RBM15;REV__nc|ENSG00000162775|Q96T37-2|RBM15;REV__nc|ENSG00000162775|Q96T37-3|RBM15;REV__nc|ENSG00000162775|Q96T37-4|RBM15 19.256988751693697 0.5244284437930726 5 K{M(Oxidation (M))|F}DYP{I|L} 6 -1 50.706 0.0 0.0 4.2698 0.0 0.0 406.18699843574376 0.0 406.18699843574376 0.0 31.901508504421585 0.0 0.0 0 0.9247425010840048 0.0 0.7302046884880937 0.0 K{M(Oxidation (M))|F}DYP{I|L} 4.2698 - 901 1 2.053 110703.1 1.0 3929 4351 8273 SUDHL4_400M_050219_1,8282 SUDHL4_400M_050219_1,8282,PPVWDSDPYL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8283 44.153 445.0 238950.0 25 0 22745.0 + 30859 RIMDPDVITGY 11 105 640.3214772631911 1278.6284015931822 2 640.3212158083916 MULTI CID FTMS 0 0 0 8273 222022.25 0.4366575639899814 1 -0.0414085388183593 10 Unmodified _RIMDPDVITGY_ ENSG00000062822|ENST00000440232|POLD1 46.0223103267499 0.1396584557920269 5 [{I|L}T][VS]D[DP]V{I|L}TGY 12 3 + 67.635 0.0 0.0 5.2896 5.2896 80.218 0.0 0.0 0.0 1.656588647730814 8.398255349109505 1.656588647730814 1.656588647730814 0 1.774227503252014 0.9208187539523752 0.6861818737241735 0.0 [{I|L}T][VS]D[DP]V{I|L}TGY;{[SA]|[TG]}Y[YR]SV{I|L}TGY;[HT]T{I|L}VS{[MG]|[TS]}{I|L}TGY;[{I|L}T][VS][HC]SV{I|L}TGY;{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}D[DP]V{I|L}TGY;[{I|L}T][HT]{[MG]|[TS]}SV{I|L}TGY;[{I|L}T][VS]D[DP]V{I|L}GTY;{[SA]|[TG]}Y[YR]SV{I|L}GTY;[HT]T{I|L}{[CT]|[{M(Oxidation (M))|F}G]}AV{I|L}TGY;[{I|L}T][Q{I|L}]AN[RD]EGY 5.2896;5.1601;4.6328;4.6287;4.3869;4.3833;4.1933;4.0637;3.9973;3.8038 -;-;-;-;-;-;-;-;-;- 974 1 2.053 88979.9 1.0 3930 4351 8273 SUDHL4_400M_050219_1,8283 SUDHL4_400M_050219_1,8283,RIMDPDVITGY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8284 44.159 334.0 251230.0 25 0 47973.0 + 14762 ILDGNQLHI 9 112 511.7870500473471 1021.5595471614944 2 511.7847167849541 MULTI CID FTMS 0 0 0 8273 161840.125 1.0 0 0.0 11 Unmodified _ILDGNQLHI_ ENSG00000009307|ENST00000358528|CSDE1;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 46.020951573049366 0.0490941689151868 5 {I|L}{I|L}D 3 6 55.362 0.0 0.0 5.4193 0.0 0.0 0.0 677.3391207330686 677.3391207330686 36.116421613879766 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.7742275032520141 0.0 + {I|L}{I|L}D 5.4193 + + 229 + 1 2.053 66426.6 1.0 3931 4351 8273 SUDHL4_400M_050219_1,8284 SUDHL4_400M_050219_1,8284,ILDGNQLHI True True ILDGNQLHI 44.158778 511.784716784954 944176.375 8273.0 nc|ENSG00000009307|O75534-2|CSDE1;;nc|ENSG00000009307|O75534-3|CSDE1;;nc|ENSG00000009307|O75534-4|CSDE1;;ENSG00000009307|ENST00000358528|CSDE1 2.5713656346003213 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8285 44.164 304.0 386420.0 25 0 23704.0 -1 0 106 873.9145653402629 1745.8145777473258 2 874.4153320193291 MULTI CID FTMS 0 0 0 8273 114259.5390625 0.1429107285102644 18 -1.548065185546875 12 5 [PA]S{I|L}N[VS][HA]DAD{I|L}NP[EP] 17 -1 + 55.48 0.0 0.0 3.1779 3.1779 77.376 0.0 0.0 0.0 12.343474177516654 30.785599148163683 12.343474177516654 3.952176730645064 0 0.0 0.8538719643217619 1.110924374808178 0.2887254899964357 [PA]S{I|L}N[VS][HA]DAD{I|L}NP[EP];[PA]S{[NV]|[RG]}S{I|L}[HA]DAD{I|L}NP[EP];[PA]S{I|L}N[PA][EP]DAD{I|L}NP[EP];[PA]S{I|L}[WP][QP]DAD{I|L}NP[EP];[PA]S{I|L}A[QT][HA]DAD{I|L}NP[EP];[PA]S[KG]D{I|L}[HA]DAD{I|L}NP[EP];[PA]S{I|L}N[VS][WH]AD{I|L}N[WH];[PA]S{I|L}N[VS][HA]WD{I|L}N[WH];[PA]S{[NV]|[RG]}S{I|L}[YC(Carbamidomethyl (C))]AD{I|L}NP[EP];[PA]S{I|L}N[PA][EP]WD{I|L}NP[EP] 3.1779;2.9515;2.9061;2.8727;2.8108;2.7791;2.7531;2.7531;2.7386;2.6933 -;-;-;-;-;-;-;-;-;- 4011 1 2.053 80090.5 1.0 3932 4351 8273 SUDHL4_400M_050219_1,8285 SUDHL4_400M_050219_1,8285, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8287 44.169 3.7 12664000.0 25 0 4074500.0 + 27345 PHSSPLALL 9 58 467.7715667304769 933.5285805277538 2 467.7717162966728 MULTI CID FTMS 0 0 0 8286 17085002.0 1.0 0 0.0 1 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 38.15118350030904 0.0856056900103839 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 9 4 + 45.123 0.0 0.0 4.8336 4.8336 87.28 0.0 0.0 0.0 5.642492736872597 31.2101498947667 5.642492736872597 9.24742501084004 0 0.9247425010840048 0.0 1.274227503252014 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]{I|L}[PS]{I|L};[TA][VP]H[PS]{I|L}{I|L};[TA][VP]H{I|L}[PS]{I|L};[TA][VP]{I|L}H[PS]{I|L} 4.8336;3.843;3.3074;2.3169;1.0283 -;-;-;-;- 195 1 2.053 42632.6 1.0 3933 4352 8286 SUDHL4_400M_050219_1,8287 SUDHL4_400M_050219_1,8287,PHSSPLALL True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8288 44.17 47.0 1055200.0 25 0 210710.0 + 14749 ILDEAIYKV 9 62 532.3048628861225 1062.5951728390448 2 532.3051635622978 MULTI CID FTMS 0 0 0 8286 803318.0 0.2890783427757898 2 -0.066314697265625 2 Unmodified _ILDEAIYKV_ ENSG00000166578|ENST00000416617|IQCD;nc|ENSG00000166578|Q96DY2-2|IQCD;nc|ENSG00000166578|Q96DY2-3|IQCD 36.506200033944 0.094635877243972 5 {I|L}{I|L}DEA{I|L}YKV 9 0 + 78.287 0.0 0.0 7.3675 7.3675 97.36 0.0 0.0 0.0 62.08888129186974 7.765527053973855 7.765527053973855 78.28676887475368 0 1.1549471895720984 2.0 0.0 0.0 + + {I|L}{I|L}DEA{I|L}YKV 7.3675 + + 91 + 1 2.053 44816.8 1.0 3934 4352 8286 SUDHL4_400M_050219_1,8288 SUDHL4_400M_050219_1,8288,ILDEAIYKV True True ILDEAIYKV 44.170068 532.305163562298 19544464.0 8286.0 nc|ENSG00000166578|Q96DY2-2|IQCD;;nc|ENSG00000166578|Q96DY2-3|IQCD;;ENSG00000166578|ENST00000416617|IQCD 7.151837189992269 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8289 44.171 37.0 1273700.0 25 0 160400.0 + 9708 FLTNKDKLK 9 70 553.8303356439183 1105.6461183546364 2 553.8306152224541 MULTI CID FTMS 0 0 0 8286 1103406.25 0.8695152375594727 2 -0.066314697265625 3 Unmodified _FLTNKDKLK_ REV__ENSG00000101596|ENST00000320876|SMCHD1;REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1 13.90604991867851 0.4602628045680013 5 {I|L}{I|L}K 3 -1 15.662 0.0 0.0 1.4165 0.0 0.0 733.3595448224625 0.0 733.3595448224625 0.0 3.443350238481033 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}K 1.4165 - 19 1 2.053 42762.7 1.0 3935 4352 8286 SUDHL4_400M_050219_1,8289 SUDHL4_400M_050219_1,8289,FLTNKDKLK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8290 44.172 27.0 1453300.0 25 0 168640.0 + 25797 AAVPRAAFL 9 65 458.7758950519747 0 458.7756835818291 PEAK CID FTMS 0 0 0 8286 810494.125 1.0 0 0.0 4 Unmodified _NKLQTLSI_ nc|ENSG00000089248|P30040-2|ERP29;ENSG00000089248|ENST00000261735|ERP29;ENST00000553161.1_1_12:112451251-112452397:+|nuORF 11.640296217721598 0.5231213682848052 5 {I|L} 1 7 6.9897 0.0 0.0 0.76345 0.0 0.0 242.14477873572508 557.2870424422055 799.4318211779305 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.76345 + + 9 + 1 2.053 38419.0 1.0 3936 4352 8286 SUDHL4_400M_050219_1,8290 SUDHL4_400M_050219_1,8290,NKLQTLSI False False AAVPRAAFL 44.172424 458.7766 12641389.0 8286.0 nc|ENSG00000089248|P30040-2|ERP29;;ENSG00000089248|ENST00000261735|ERP29;;ENST00000553161.1_1_12:112451251-112452397:+|nuORF 2.2053443590799966 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8291 44.174 87.0 661310.0 25 0 130010.0 + 40452 VILLKQFADS 10 70 567.3298300720465 1132.645107210893 2 567.3292724490166 MULTI CID FTMS 0 0 0 8286 623339.3125 0.4616329318368793 7 -0.5648345947265625 5 Unmodified _VILLKQFADS_ REV__ENSG00000278023|ENST00000620284|RDM1;REV__nc|ENSG00000278023|Q8NG50-12|RDM1;REV__nc|ENSG00000278023|Q8NG50-2|RDM1 1.3295316138638542 0.7204866299213272 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.053 51218.7 1.0 3937 4352 8286 SUDHL4_400M_050219_1,8291 SUDHL4_400M_050219_1,8291,VILLKQFADS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8292 44.176 79.0 339800.0 25 0 24136.0 + 13519 HMPLVIKHG 9 63 516.296186069294 1030.577819205388 2 516.2958862185478 MULTI CID FTMS 0 0 0 8286 604625.1875 0.9455931258900364 -3 0.2828598022460937 6 Unmodified _HMPLVIKHG_ REV__ENSG00000160218|ENST00000291574|TRAPPC10 2.059750862983233 0.8427793054688888 5 {M(Oxidation (M))|F} 1 -1 11.109 0.0 0.0 1.078 0.0 0.0 865.4979069512848 0.0 865.4979069512848 0.0 1.2763625255165325 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.078 + + 4 + 1 2.053 27133.0 1.0 3938 4352 8286 SUDHL4_400M_050219_1,8292 SUDHL4_400M_050219_1,8292,HMPLVIKHG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8293 44.178 107.0 672790.0 25 0 49134.0 + 11759 GLKEGIPAL 9 98 449.27457608596393 896.5345992387279 2 449.2743408083916 MULTI CID FTMS 0 0 0 8286 538121.125 0.7972368553122283 -1 0.0414085388183593 7 Unmodified _GLKEGIPAL_ ENSG00000167658|ENST00000309311|EEF2 47.74868867922204 0.0453060283459952 5 {[VA]|[{I|L}G]}S{[VA]|[{I|L}G]}G{I|L}PA{I|L} 10 3 + 56.208 0.0 0.0 6.2694 6.2694 82.071 0.0 0.0 0.0 3.282957030980711 39.89654813773832 3.282957030980711 0.9691001300805624 0 1.2302046884880935 1.3010299956639813 0.7742275032520141 0.0 {[VA]|[{I|L}G]}S{[VA]|[{I|L}G]}G{I|L}PA{I|L};{[VA]|[{I|L}G]}{[VA]|[{I|L}G]}SG{I|L}PA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[VA]|[{I|L}G]}G{I|L}PA{I|L};{[VA]|[{I|L}G]}S{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PA{I|L};{[DA]|[EG]}[K{I|L}]G{I|L}PA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PA{I|L};{[VA]|[{I|L}G]}[KT][TP]PA{I|L};[PA]{[VA]|[{I|L}G]}A[VS]VA{I|L};[PA][Q{I|L}][VS]VA{I|L};{[VA]|[{I|L}G]}S[{I|L}A][VG]PA{I|L} 6.2694;6.1613;5.3681;5.151;4.8359;4.2557;3.8194;3.8074;3.611;3.5917 -;-;-;-;-;-;-;-;-;- 559 1 2.053 61192.7 1.0 3939 4352 8286 SUDHL4_400M_050219_1,8293 SUDHL4_400M_050219_1,8293,GLKEGIPAL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8294 44.18 83.0 619090.0 25 0 84945.0 + 17950 KQYGNEVFL 9 77 549.284735448133 1096.554917963066 2 549.2852661013603 MULTI CID FTMS 0 0 0 8286 490959.09375 0.3719346921823003 2 -0.066314697265625 8 Unmodified _KQYGNEVFL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 29.84058131909904 0.1515068451768857 5 RNEV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 6 4 27.567 0.0 0.0 2.5139 0.0 0.0 320.1245289533219 0.0 320.1245289533219 0.0 13.587353034733027 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.805462187404089 RNEV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.5139 - 143 1 2.053 46211.6 1.0 3940 4352 8286 SUDHL4_400M_050219_1,8294 SUDHL4_400M_050219_1,8294,KQYGNEVFL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8295 44.194 800.0 169700.0 25 0 10266.0 + 31263 RLWDLTTGTTT 11 156 632.8311676373406 1263.6477823414812 2 632.8293945193291 MULTI CID FTMS 0 0 0 8286 82443.546875 0.4829333210076604 -3 0.2828598022460937 9 Unmodified _RLWDLTTGTTT_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 39.21299971606389 0.2245192836502623 5 [PS]TER{I|L}TTGTTT 12 5 + 69.305 0.0 0.0 5.4845 5.4845 82.964 0.0 0.0 0.0 3.267278352942796 5.256978396302984 3.267278352942796 3.267278352942796 0 0.8979400086720375 0.4202164033831898 1.32700872430816 0.0 [PS]TER{I|L}TTGTTT;{[DS]|[MA]|[CV]|TT}GT[{I|L}P]{I|L}TTGTTT;{NN|[MP]|[D{I|L}]|[EV]}GER{I|L}TTGTTT;{[DA]|[EG]}VER{I|L}TTGTTT;[VG]EER{I|L}TTGTTT;{NN|[MP]|[D{I|L}]|[EV]}WR{I|L}TTGTTT;[PS]TER{I|L}TGTTTT;{NN|[MP]|[D{I|L}]|[EV]}WVG{I|L}TTGTTT;H[PS]GTT{I|L}G[RH]TT;H[PS]GTT[HV]KVTT 5.4845;5.226;5.198;5.0686;4.6932;4.6747;4.6301;4.5822;4.5658;4.5275 -;-;-;-;-;-;-;-;-;- 3702 1 2.053 107129.7 0.6399999856948853 3941 4352 8286 SUDHL4_400M_050219_1,8295 SUDHL4_400M_050219_1,8295,RLWDLTTGTTT False True RLWDLTTGTTT 44.194159 632.829394519329 1222119.625 8286.0 ENST00000514183.5_1_5:180665952-180670713:-|nuORF;;ENSG00000204628|ENST00000512805|RACK1;;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;;ENST00000505461.5_1_5:180668319-180670896:-|nuORF 7.07830270131429 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8296 44.195 32.0 1571600.0 25 0 275540.0 -1 0 85 543.3000992580236 542.2928227914235 1 544.2996093630791 MULTI CID FTMS 0 0 0 8286 169239.796875 1.0 0 0.0 10 5 H 1 -1 3.4949 0.0 0.0 0.64446 0.0 0.0 317.18118751485946 85.0302981012328 402.21148561609226 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.64446 - 14 + 1 2.053 40295.2 1.0 3942 4352 8286 SUDHL4_400M_050219_1,8296 SUDHL4_400M_050219_1,8296, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8297 44.209 800.0 122890.0 25 0 4604.9 -1 0 117 964.117277722814 2889.3300037686417 3 964.120166003704 MULTI CID FTMS 0 0 0 8286 136546.1875 0.5619571305381736 -1 0.0414085388183593 11 5 [MN]P 3 -1 23.952 0.0 0.0 0.829 0.0 0.0 0.0 2544.170219182957 2544.170219182957 8.396037294708375 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MN]P 0.829 - 1234 1 2.053 69792.6 0.7400000095367432 3943 4352 8286 SUDHL4_400M_050219_1,8297 SUDHL4_400M_050219_1,8297, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8299 44.217 213.0 551590.0 25 0 113770.0 + 19560 LFRKDPTL 8 101 495.2929817511053 0 495.2930175662041 PEAK CID FTMS 0 0 0 8298 163846.265625 1.0 0 0.0 1 Unmodified _LFRKDPTL_ REV__ENSG00000177302|ENST00000321105|TOP3A;REV__nc|ENSG00000177302|Q13472-2|TOP3A;REV__nc|ENSG00000177302|Q13472-3|TOP3A 19.438996006549623 0.4285751805470146 5 PA 2 -1 9.9485 0.0 0.0 1.0064 0.0 0.0 260.15243218606923 557.3064058893186 817.4588380753878 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 PA 1.0064 - 47 + 1 2.044 96248.4 1.0 3944 4353 8298 SUDHL4_400M_050219_1,8299 SUDHL4_400M_050219_1,8299,LFRKDPTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8300 44.231 800.0 197230.0 25 0 19430.0 + 34079 SLLGANKRCLK 11 157 601.8530773776121 1201.691601822024 2 601.3563110232353 MULTI CID FTMS 0 0 0 8298 96111.1640625 0.7766476340402451 -1 0.04486083984375 2 Unmodified _SLLGANKRCLK_ REV__ENST00000381496.7_1_10:468766-532425:-|nuORF 21.53697664764585 0.586507868110548 5 {I|L}S{I|L}DDK 6 -1 64.117 0.0 0.0 5.3356 0.0 0.0 0.0 527.3212984674436 527.3212984674436 1.8444719792741893 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.4247425010840047 0.0 {I|L}S{I|L}DDK 5.3356 - 2396 + 1 2.044 115830.5 0.6899999976158142 3945 4353 8298 SUDHL4_400M_050219_1,8300 SUDHL4_400M_050219_1,8300,SLLGANKRCLK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8302 44.235 49.0 813370.0 25 0 59753.0 + 9575 FLIRESETL 9 66 554.306320935616 1106.598088938032 2 554.3062621951103 MULTI CID FTMS 0 0 0 8301 670227.8125 0.7126439340523363 1 -0.0737380981445312 1 Unmodified _FLIRESETL_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 62.57269311338072 0.0246576765497938 5 {I|L}{M(Oxidation (M))|F}T{I|L} 4 6 38.914 0.0 0.0 3.5166 0.0 0.0 614.3008900373062 0.0 614.3008900373062 0.0 25.815468932362577 0.0 0.0 0 0.75 0.0 0.4247425010840047 0.0 {I|L}{M(Oxidation (M))|F}T{I|L} 3.5166 - 58 1 2.044 36769.6 1.0 3946 4354 8301 SUDHL4_400M_050219_1,8302 SUDHL4_400M_050219_1,8302,FLIRESETL True True FLIRESETL 44.235097 554.30626219511 9635657.0 8301.0 nc|ENSG00000254087|P07948-2|LYN;;ENSG00000254087|ENST00000519728|LYN 4.197754780451457 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8303 44.237 90.0 476540.0 25 0 53357.0 + + 41048 MVIVPTREL 9 54 529.3073055039067 1056.6000580746131 2 529.3076049685478 MULTI CID FTMS 0 0 0 8301 407536.15625 0.6716287767398097 1 -0.0737380981445312 2 Unmodified _VMIVVAQGLQ_ ENSG00000110367|ENST00000534980|DDX6 20.453626601364224 0.5043500229302764 5 [{I|L}V]M{[SA]|[TG]}{I|L}V{I|L} 8 -1 29.831 0.0 0.0 2.8233 0.0 0.0 0.0 227.08556567139945 227.08556567139945 25.22669403309017 0.0 0.0 0.0 0 0.4247425010840047 1.3979400086720375 0.0 0.0 [{I|L}V]M{[SA]|[TG]}{I|L}V{I|L} 2.8233 - 73 1 2.044 38727.0 1.0 3947 4354 8301 SUDHL4_400M_050219_1,8303 SUDHL4_400M_050219_1,8303,VMIVVAQGLQ False False MVIVPTREL 44.23709 529.307604968548 3644080.25 8301.0 ENSG00000110367|ENST00000534980|DDX6 2.915465553601583 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8304 44.24 118.0 480670.0 25 0 85100.0 + 102 AAIHPSLEI 9 82 475.7690726276885 949.523592322177 2 475.7690002322197 MULTI CID FTMS 0 0 0 8301 574623.4375 0.6615699354863221 -1 0.021453857421875 3 Unmodified _AAIHPSLEI_ ENSG00000141127|ENST00000268835|PRPSAP2;nc|ENSG00000141127|O60256-2|PRPSAP2;nc|ENSG00000141127|O60256-3|PRPSAP2;nc|ENSG00000141127|O60256-4|PRPSAP2 36.04419817259434 0.0971720506436186 5 AA[H{I|L}][PS]{I|L}E{I|L} 9 0 + 43.904 0.0 0.0 4.6238 4.6238 82.744 0.0 0.0 0.0 2.3620379965520044 34.72311964638479 2.3620379965520044 6.050981955100383 0 0.75 1.0969100130080565 0.7742275032520141 0.0 + + AA[H{I|L}][PS]{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]T{I|L}E{I|L};AA{[{M(Oxidation (M))|F}H]|[RQ]}H[RV]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[K{I|L}][DV]E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}][VP]{M(Oxidation (M))|F}{I|L};[C(Carbamidomethyl (C))K][R{I|L}]A[R{M(Oxidation (M))|F}];[VP]WW[H{I|L}]{I|L} 4.6238;3.9866;1.9641;1.8292;1.1964;0.73364;0.70684 +;-;-;-;-;-;- + 123 1 2.044 48967.0 1.0 3948 4354 8301 SUDHL4_400M_050219_1,8304 SUDHL4_400M_050219_1,8304,AAIHPSLEI True True AAIHPSLEI 44.23953 475.76900023222 13407046.0 8301.0 nc|ENSG00000141127|O60256-3|PRPSAP2;;nc|ENSG00000141127|O60256-2|PRPSAP2;;ENSG00000141127|ENST00000268835|PRPSAP2;;nc|ENSG00000141127|O60256-4|PRPSAP2 4.757056474685669 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8305 44.248 458.0 173600.0 25 0 13665.0 + 28419 PSVPLEAI 8 126 413.23840701574943 824.4622610982989 2 413.2391235232353 MULTI CID FTMS 0 0 0 8301 142621.90625 0.4221350637669934 -2 0.066314697265625 4 Unmodified _PSVPLEAI_ REV__ENSG00000188266|ENST00000388988|HYKK;REV__nc|ENSG00000188266|A2RU49-2|HYKK;REV__nc|ENSG00000188266|A2RU49-3|HYKK 5.760428011301431 0.7893668129297577 5 VVSQ 4 -1 15.706 0.0 0.0 1.905 0.0 0.0 0.0 408.2145858876145 408.2145858876145 4.868704215576853 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.0 VVSQ 1.905 - 28 1 2.044 66014.2 1.0 3949 4354 8301 SUDHL4_400M_050219_1,8305 SUDHL4_400M_050219_1,8305,PSVPLEAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8306 44.261 800.0 171900.0 25 0 17138.0 + 11721 GLIDENPGL 9 160 464.2429242127351 926.4712954922702 2 464.2421447634697 MULTI CID FTMS 0 0 0 8301 86255.65625 0.1810437220778048 -1 0.021453857421875 5 Unmodified _GLIDENPGL_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 30.22481116460888 0.1466181017706357 5 {[VA]|[{I|L}G]}{I|L} 3 6 21.796 0.0 0.0 2.3525 0.0 0.0 0.0 640.2580746272889 640.2580746272889 4.289573889893759 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {[VA]|[{I|L}G]}{I|L} 2.3525 + + 253 1 2.044 109201.6 0.4699999988079071 3950 4354 8301 SUDHL4_400M_050219_1,8306 SUDHL4_400M_050219_1,8306,GLIDENPGL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8307 44.275 800.0 469960.0 25 0 41769.0 + 38328 TQILSVPKV 9 285 492.8079512412087 0 492.8080016970634 PEAK CID FTMS 0 0 0 8301 83356.2578125 1.0 0 0.0 6 Unmodified _TQLGNLLIL_ nc|ENSG00000120802|P42166|TMPO 15.248480904072842 0.2520662914010398 5 V 1 9 6.9897 0.0 0.0 0.71062 0.0 0.0 799.4430528957002 82.06705652408436 881.5101094197846 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.71062 - 462 + 1 2.044 279840.8 0.4900000095367431 3951 4354 8301 SUDHL4_400M_050219_1,8307 SUDHL4_400M_050219_1,8307,TQLGNLLIL False False TQILSVPKV 44.275271 492.808001697063 595514.8125 8301.0 nc|ENSG00000120802|P42166|TMPO -0.3071295619010925 2.0 False 9.0 True nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 8308 44.276 16.0 1426800.0 25 0 200670.0 + 1768 ALRRRDNL 8 49 507.3034843535999 1012.5924157739998 2 507.3031494021416 MULTI CID FTMS 0 0 0 8301 2842435.75 0.8732581198135686 1 -0.0737380981445312 7 Unmodified _ALRRRDNL_ REV__ENSG00000142192|ENST00000346798|APP;REV__nc|ENSG00000142192|P05067-10|APP;REV__nc|ENSG00000142192|P05067-11|APP;REV__nc|ENSG00000142192|P05067-3|APP;REV__nc|ENSG00000142192|P05067-4|APP;REV__nc|ENSG00000142192|P05067-5|APP;REV__nc|ENSG00000142192|P05067-6|APP;REV__nc|ENSG00000142192|P05067-7|APP;REV__nc|ENSG00000142192|P05067-8|APP;REV__nc|ENSG00000142192|P05067-9|APP 19.438996006549623 0.6237395211498085 5 N{I|L} 2 -1 16.995 0.0 0.0 1.6783 0.0 0.0 767.4547184857171 0.0 767.4547184857171 0.0 2.390690719683093 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 N{I|L} 1.6783 + + 18 + 1 2.044 24335.9 1.0 3952 4354 8301 SUDHL4_400M_050219_1,8308 SUDHL4_400M_050219_1,8308,ALRRRDNL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8309 44.29 800.0 189480.0 25 0 14966.0 + 34442 SLYDYNPNL 9 117 1098.510749596736 1097.503473130136 1 1100.514086902142 MULTI CID FTMS 0 0 0 8301 189821.515625 0.040035128134798 6 -0.60791015625 8 Unmodified _SLYDYNPNL_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 49.93300154707207 0.0405168250806675 5 {[TV]|[{I|L}S]}YDYNV[QP] 9 3 + 46.85 0.0 0.0 4.2688 4.2688 81.459 0.0 0.0 0.0 5.871501757189002 0.944825567400315 0.944825567400315 5.871501757189002 0 1.0 1.5228787452803376 0.3054621874040891 0.6505149978319906 {[TV]|[{I|L}S]}YDYNV[QP];KDVNYS{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}D[DP]K;{[TV]|[{I|L}S]}YDY[Y{M(Oxidation (M))|F}]K;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YD[DP]K;{NN|[MP]|[D{I|L}]|[EV]}YSYNV[QP];{[TV]|[{I|L}S]}YD{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[DP]K;KDVMYPS{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};KDVNYD{I|L}[MT];{[TV]|[{I|L}S]}YDYAAA[QP] 4.2688;3.7338;3.6871;3.5414;3.5267;3.4715;3.4169;3.1137;3.1131;3.0404 -;-;-;-;-;-;-;-;-;- 4547 1 2.044 99387.7 0.7699999809265137 3953 4354 8301 SUDHL4_400M_050219_1,8309 SUDHL4_400M_050219_1,8309,SLYDYNPNL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8310 44.304 800.0 84213.0 25 0 4461.8 + 7774 ELGGLGAI 8 110 729.4147654926088 728.4074890260088 1 729.4124023318291 MULTI CID FTMS 0 0 0 8301 155248.65625 0.4517721753582335 4 -0.4639015197753906 9 Unmodified _ELGGLGAI_ ENST00000582608.5_1_17:80403674-80404562:-|nuORF 59.79521254764295 0.1151759508933577 5 {[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}Q{I|L} 6 5 + 62.729 0.0 0.0 8.6118 8.6118 93.365 0.0 0.0 0.0 8.94061491126763 16.197887582883936 8.94061491126763 8.94061491126763 0 0.3494850021680094 1.0969100130080565 0.9698565171985376 1.0941876774005248 {[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}E{I|L}{I|L};[Q{I|L}]D{I|L}Q{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EQ{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{I|L}Q{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QE{I|L}{I|L} 8.6118;7.3844;7.3186;7.256;7.0216;6.734;6.628;6.1463;6.0527;5.9244 -;-;-;-;-;-;-;-;-;- 238 1 2.044 52059.7 0.699999988079071 3954 4354 8301 SUDHL4_400M_050219_1,8310 SUDHL4_400M_050219_1,8310,ELGGLGAI True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8312 44.309 19.0 3304500.0 25 0 561240.0 + 13255 HIIENIVAV 9 60 504.29792098657487 1006.5812890399498 2 504.2981445193291 MULTI CID FTMS 0 0 0 8311 3543542.75 0.5842169435872681 2 -0.2738914489746094 1 Unmodified _HIIENIVAV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 37.97399986684836 0.0865783450051559 5 [H{I|L}]{I|L}EN{I|L}VAV 9 0 + 68.663 0.0 0.0 6.8214 6.8214 83.971 0.0 0.0 0.0 22.37643016799588 53.96977168525439 22.37643016799588 1.2763625255165325 0 0.7742275032520141 1.5228787452803376 0.0 0.3807196863200844 + + [H{I|L}]{I|L}EN{I|L}VAV;[H{I|L}]{I|L}ENV{I|L}AV;[H{I|L}]{I|L}EGG{I|L}VAV;[H{I|L}]{I|L}EGGV{I|L}AV;{[QN]|[E{I|L}]|[KN]}[H{I|L}]N{I|L}VAV;{[QN]|[E{I|L}]|[KN]}[H{I|L}]NV{I|L}AV;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}VAV;{[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}HV{I|L}AV;{[QN]|[E{I|L}]|[KN]}[H{I|L}]GG{I|L}VAV;{[QN]|[E{I|L}]|[KN]}[H{I|L}]GGV{I|L}AV 6.8214;6.6946;5.5283;5.0543;3.1466;3.0198;2.8475;2.7207;2.2318;2.105 +;-;-;-;-;-;-;-;-;- + 120 1 2.036 54905.5 1.0 3955 4355 8311 SUDHL4_400M_050219_1,8312 SUDHL4_400M_050219_1,8312,HIIENIVAV True True HIIENIVAV 44.308833 504.298144519329 104821752.0 8311.0 ENSG00000171490|ENST00000571133|RSL1D1;;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;;nc|ENSG00000171490|O76021-2|RSL1D1;;ENST00000574823.5_1_16:11935494-11935832:-|nuORF 7.024699052174886 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8313 44.31 27.0 2331600.0 25 0 230740.0 38696 TTPVKITLT 9 89 487.30012437302486 972.5856958128496 2 487.3001586794853 MULTI CID FTMS 0 0 0 8311 2606739.5 0.6606075776879098 2 -0.2738914489746094 2 Unmodified _TTPVKITLT_ ENSG00000139970|ENST00000267484|RTN1 41.8396318013385 0.0653578398400075 5 [{I|L}T]GVG{I|L}VTT{I|L} 10 6 + 73.203 0.0 0.0 7.5266 7.5266 92.159 0.0 0.0 0.0 9.023722004121453 16.53212513775344 9.023722004121453 9.023722004121453 0 0.8807196863200843 1.3979400086720375 1.2614393726401687 0.0 [{I|L}T]GVG{I|L}VTT{I|L};{[DS]|[MA]|[CV]|TT}PK{I|L}VTT{I|L};{[DS]|[MA]|[CV]|TT}P{I|L}KVTT{I|L};[K{I|L}]EG{I|L}VTT{I|L};{[TV]|[{I|L}S]}AVG{I|L}VTT{I|L};[{I|L}T][TP]KVTT{I|L};[VG][{I|L}T]G{I|L}VTT{I|L};[PS]{I|L}T[K{I|L}]TT{I|L};{[TV]|[{I|L}S]}PT[K{I|L}]TT{I|L};{[DS]|[MA]|[CV]|TT}PV[K{I|L}]TT{I|L} 7.5266;6.5988;6.4704;6.4458;6.3658;6.1358;5.9471;5.8651;5.5941;5.471 -;-;-;-;-;-;-;-;-;- 988 1 2.036 53256.3 1.0 3956 4355 8311 SUDHL4_400M_050219_1,8313 SUDHL4_400M_050219_1,8313,TTPVKITLT True False KLGEIVTTI 44.310013 487.300158679485 69263652.0 8311.0 ENST00000483848.5_1_3:57563094-57582900:-|nuORF;;ENST00000463733.5_1_7:127228552-127229672:+|nuORF;;ENST00000493378.1_1_3:57569737-57582900:-|nuORF;;ENST00000397387.2_1_13:101408869-101409262:-|nuORF;;ENSG00000143761|ENST00000272102|ARF1;;nc|ENSG00000134287|P61204-2|ARF3;;ENST00000605447.1_1_9:136944076-136944538:+|nuORF;;ENSG00000004059|ENST00000000233|ARF5;;ENSG00000134287|ENST00000256682|ARF3;;ENST00000470670.5_1_1:228270461-228285316:+|nuORF;;ENSG00000168374|ENST00000303436|ARF4 2.865691820780436 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8314 44.312 105.0 892470.0 25 0 110320.0 38504 TSKKIVIT 8 92 445.2883619942348 888.5621710552696 2 445.2883788943291 MULTI CID FTMS 0 0 0 8311 1788403.875 1.0 0 0.0 3 Unmodified _TSKKIVIT_ ENSG00000108179|ENST00000225174|PPIF;ENST00000448165.1_1_10:81113430-81113595:+|nuORF 0.6014990680409731 0.820681427635312 5 [H{I|L}]{I|L} 3 6 10.915 0.0 0.0 1.2284 0.0 0.0 0.0 522.3113525340383 522.3113525340383 3.925449767853316 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 [H{I|L}]{I|L} 1.2284 - 11 1 2.036 79425.8 1.0 3957 4355 8311 SUDHL4_400M_050219_1,8314 SUDHL4_400M_050219_1,8314,TSKKIVIT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8315 44.315 113.0 728870.0 25 0 77800.0 + 30020 QTLTMKTII 9 111 524.808480439451 1047.602407945702 2 524.8090698122978 MULTI CID FTMS 0 0 0 8311 449054.1875 0.9551046636623404 -1 0.0737380981445312 4 Unmodified _QTLTMKTII_ REV__ENSG00000113430|ENST00000231357|IRX4;REV__ENSG00000159387|ENST00000290552|IRX6;REV__ENSG00000170549|ENST00000302006|IRX1;REV__ENSG00000170561|ENST00000302057|IRX2;REV__ENSG00000176842|ENST00000394636|IRX5;REV__ENSG00000177508|ENST00000329734|IRX3;REV__ENST00000558180.2_1_16:54318400-54319510:-|nuORF;REV__ENST00000558597.1_2_16:54966274-54967782:+|nuORF;REV__nc|ENSG00000113430|P78413-2|IRX4;REV__nc|ENSG00000176842|P78411-2|IRX5;REV__nc|ENSG00000176842|P78411-3|IRX5 10.073929032068715 0.563993802247229 5 [DP]VYTQ 6 -1 25.886 0.0 0.0 2.471 0.0 0.0 0.0 341.2608911822833 341.2608911822833 12.390983013744894 0.0 0.0 0.0 0 0.0 0.5686362358410126 1.0189301784845295 0.0 [DP]VYTQ 2.471 - 490 1 2.036 69054.4 1.0 3958 4355 8311 SUDHL4_400M_050219_1,8315 SUDHL4_400M_050219_1,8315,QTLTMKTII False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8316 44.321 340.0 486990.0 25 0 27255.0 20397 LLGSYRKKT 9 165 533.3228860172864 1064.6312191013726 2 533.3239013552666 MULTI CID FTMS 0 0 0 8311 441927.1875 1.0 0 0.0 5 Unmodified _LLGSYRKKT_ ENSG00000116675|ENST00000371069|DNAJC6 12.531546534597751 0.4974689918368763 5 {I|L}DRASYKV 8 6 15.827 0.0 0.0 1.4866 0.0 0.0 114.1145697867226 0.0 114.1145697867226 0.0 6.362912940605485 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}DRASYKV 1.4866 - 526 + 1 2.036 128080.2 1.0 3959 4355 8311 SUDHL4_400M_050219_1,8316 SUDHL4_400M_050219_1,8316,LLGSYRKKT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8317 44.331 613.0 254140.0 25 0 33775.0 -1 LYRKMKLR 8 180 562.3437079064552 1122.6728628797102 2 562.3436157107353 MULTI CID FTMS 0 0 0 8311 426154.59375 1.0 0 0.0 6 Oxidation (M) _LYRKM(Oxidation (M))KLR_ ENSG00000124181|ENST00000685551|PLCG1;ENST00000465571.2_1_20:39794900-39795514:+|nuORF;nc|ENSG00000124181|P19174|PLCG1 2.577480529830294 0.808687252328423 5 QQ 2 -1 12.959 0.0 0.0 1.1543 0.0 0.0 131.16011981506023 732.3756197565061 863.5357395715664 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 QQ 1.1543 - 208 + 1 2.036 119968.6 1.0 3960 4355 8311 SUDHL4_400M_050219_1,8317 SUDHL4_400M_050219_1,8317,LYRKMKLR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8318 44.336 211.0 613860.0 25 0 67596.0 + 44437 YMIDPSGVSY 10 141 566.2529292831756 1130.4913056331511 2 566.2549316287041 MULTI CID FTMS 0 0 0 8311 385817.6875 1.0 0 0.0 7 Unmodified _YMIDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 46.020951573049366 0.1035046897853725 5 [HM]{I|L}MDQPPY 9 7 + 49.232 0.0 0.0 4.3549 4.3549 81.481 0.0 0.0 0.0 40.25263619152387 15.56971676153418 15.56971676153418 5.440680443502757 0 0.5 0.8860566476931632 0.0 0.0 [HM]{I|L}MDQPPY;[HM]{I|L}MDPQPY;[HM]{I|L}MD[AG]PPY;[HM]V[C(Carbamidomethyl (C))M]PPPY;[HM]V[C(Carbamidomethyl (C))M]KYY;[HM]{I|L}MYHHY;[HM]{I|L}MDP[AG]PY;[HM]{I|L}MDQP{M(Oxidation (M))|F}{I|L};[HM]V[EP]MQPY;[HM]{I|L}MHHYY 4.3549;3.8737;3.5404;3.4951;3.401;3.1371;3.0591;2.919;2.8515;2.8256 -;-;-;-;-;-;-;-;-;- 1372 + 1 2.036 102586.4 1.0 3961 4355 8311 SUDHL4_400M_050219_1,8318 SUDHL4_400M_050219_1,8318,YMIDPSGVSY True True YMIDPSGVSY 44.335504 566.254931628704 3221619.25 8311.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 5.901551882425944 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8319 44.346 615.0 146910.0 25 0 15892.0 + 32419 SAAPGFGTL 9 126 410.713275384984 819.411997836768 2 410.7138244509697 MULTI CID FTMS 0 0 0 8311 294545.125 1.0 0 0.0 8 Unmodified _SAAPGFGTL_ REV__ENSG00000123066|ENST00000281928|MED13L;REV__ENST00000548694.1_1_12:116413318-116418680:-|nuORF 11.640296217721598 0.521594087909532 5 [H{I|L}]{I|L}EN 5 -1 30.177 0.0 0.0 3.6828 0.0 0.0 0.0 210.075948876769 210.075948876769 16.682437647924218 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}]{I|L}EN 3.6828 - 116 1 2.036 76500.1 1.0 3962 4355 8311 SUDHL4_400M_050219_1,8319 SUDHL4_400M_050219_1,8319,SAAPGFGTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8320 44.353 399.0 186540.0 25 0 8126.2 -1 0 96 864.909235177304 1727.803917421408 2 864.9103271365166 MULTI CID FTMS 0 0 0 8311 289168.8125 0.2947807000777298 4 -0.4247817993164062 9 5 [MN]PN{I|L}NEAQKVDD{I|L}Q 15 -1 + 98.999 0.0 0.0 5.7298 5.7298 87.962 0.0 0.0 0.0 20.416467603758733 12.525749891599531 12.525749891599531 9.030899869919438 0 1.110924374808178 1.5228787452803376 0.0 1.1549471895720984 [MN]PN{I|L}NEAQKVDD{I|L}Q;[MN]PGG{I|L}NEAQKVDD{I|L}Q;[MN]PN{I|L}NEA[AG]KVDD{I|L}Q;[MN]PN{I|L}GGEAQKVDD{I|L}Q;[MN]P{M(Oxidation (M))|F}VKQAEN{I|L}HGDE;[NP]M{M(Oxidation (M))|F}VKQAEN{I|L}HGDE;[MN]P{M(Oxidation (M))|F}VKQAEN[Y{M(Oxidation (M))|F}][Q{I|L}];[MN]P{M(Oxidation (M))|F}VKQAEGG{I|L}HGDE;[MN]P{M(Oxidation (M))|F}VK[AG]AEN{I|L}HGDE;[NP]M{M(Oxidation (M))|F}VKQAEN[Y{M(Oxidation (M))|F}][Q{I|L}] 5.7298;5.2071;5.2071;5.2071;4.2074;4.1219;3.6999;3.6847;3.6847;3.6144 -;-;-;-;-;-;-;-;-;- 1407 + 1 2.036 53022.8 1.0 3963 4355 8311 SUDHL4_400M_050219_1,8320 SUDHL4_400M_050219_1,8320, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8321 44.367 800.0 244430.0 25 0 38131.0 15435 IPPSELQIGLK 11 171 597.8564939889404 1193.6984350446808 2 597.8568603396416 MULTI CID FTMS 0 0 0 8311 287362.625 0.4612130043192181 -2 0.0951919555664062 10 Unmodified _IPPSELQIGLK_ ENST00000568857.5_3_16:84164853-84177949:-|nuORF 2.9952420565917617 0.861016188266951 5 Y 1 11 10.181 0.0 0.0 0.8529 0.0 0.0 1012.6243058716324 0.0 1012.6243058716324 0.0 1.3587030978099648 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.8529 - 77 + 1 2.036 146929.5 0.9900000095367432 3964 4355 8311 SUDHL4_400M_050219_1,8321 SUDHL4_400M_050219_1,8321,IPPSELQIGLK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8322 44.373 312.0 558460.0 25 0 26843.0 -1 0 140 857.9305306134438 1713.8465082936875 2 857.9316894412041 MULTI CID FTMS 0 0 0 8311 258502.703125 0.4364377900101954 -2 0.0951919555664062 11 5 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q 15 -1 + 162.78 0.0 0.0 9.498 9.498 94.034 0.0 0.0 0.0 27.61760834195473 15.452490459521982 15.452490459521982 9.030899869919438 0 2.329689690656103 2.0 2.6223637474483468 2.8169015600442577 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[AG]RDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NADQRDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGADQRDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQRDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGAD[AG]RDG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NADQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGADQ[VG]DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[AG][VG]DG{M(Oxidation (M))|F}{I|L}Q 9.498;8.971;8.971;8.971;8.971;8.8598;8.4451;8.4451;8.4451;8.4451 -;-;-;-;-;-;-;-;-;- 8739 + 1 2.036 117690.7 1.0 3965 4355 8311 SUDHL4_400M_050219_1,8322 SUDHL4_400M_050219_1,8322, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8323 44.382 422.0 430960.0 25 0 47369.0 + 34759 SQANIAQVL 9 167 472.2644916507893 942.5144303683786 2 472.2646972537041 MULTI CID FTMS 0 0 0 8311 209248.046875 0.8245659782083994 -1 0.0737380981445312 12 Unmodified _SQANIAQVL_ ENSG00000006125|ENST00000610402|AP2B1;ENSG00000100280|ENST00000357586|AP1B1;ENST00000441188.2_1_X:92478653-92479352:-|nuORF;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1 69.10491478415734 0.0214449631113747 5 [AG]SAN{I|L}AQV{I|L} 10 3 + 70.556 0.0 0.0 7.4859 7.4859 85.863 0.0 0.0 0.0 2.407292887725305 10.012262311882765 2.407292887725305 1.7609125905568137 0 0.7742275032520141 1.154901959985743 0.9749073637206092 1.610924374808178 [AG]SAN{I|L}AQV{I|L};[AG]ASN{I|L}AQV{I|L};{[QS]|[NT]}AN{I|L}AQV{I|L};[QA]SN{I|L}AQV{I|L};[AG]GTN{I|L}AQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}AA[SG]AQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}ASQAQV{I|L};{[QG]|[NA]}TN{I|L}AQV{I|L};[AG]SAN{I|L}A[AG]V{I|L};[AG]ASN{I|L}A[AG]V{I|L} 7.4859;7.2991;7.2305;7.0824;6.9797;6.8383;6.7981;6.5445;6.5135;6.3267 -;-;+;-;-;-;-;-;-;- + 1388 1 2.036 139672.4 1.0 3966 4355 8311 SUDHL4_400M_050219_1,8323 SUDHL4_400M_050219_1,8323,SQANIAQVL True True SQANIAQVL 44.381629 472.264697253704 2052595.375 8311.0 nc|ENSG00000100280|Q10567-2|AP1B1;;nc|ENSG00000006125|P63010|AP2B1;;ENSG00000100280|ENST00000357586|AP1B1;;nc|ENSG00000100280|Q10567-4|AP1B1;;nc|ENSG00000006125|P63010-3|AP2B1;;nc|ENSG00000100280|Q10567-3|AP1B1;;ENSG00000006125|ENST00000610402|AP2B1;;ENST00000441188.2_1_X:92478653-92479352:-|nuORF 4.243277867635091 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8324 44.386 226.0 356250.0 25 0 42055.0 1340 AKKKAPCP 8 111 421.75130572389264 841.4880585145853 2 421.7514221072197 MULTI CID FTMS 0 0 0 8311 180013.671875 0.614600792155985 -1 0.0737380981445312 13 Unmodified _AKKKAPCP_ ENSG00000176273|ENST00000427197|SLC35G1;nc|ENSG00000176273|Q2M3R5-2|SLC35G1 0.7936320650641473 0.8195151834710337 5 {I|L} 1 8 8.6292 0.0 0.0 1.0255 0.0 0.0 710.3927806598963 0.0 710.3927806598963 0.0 0.4023856561211794 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0255 - 10 + 1 2.036 71509.2 1.0 3967 4355 8311 SUDHL4_400M_050219_1,8324 SUDHL4_400M_050219_1,8324,AKKKAPCP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8325 44.4 800.0 214990.0 25 0 27632.0 + 29275 QLLEGRIKL 9 189 533.2726389189789 1064.5307249047578 2 535.2698852419853 MULTI CID FTMS 0 0 0 -1 0 14 Unmodified _QICQSINFL_ ENSG00000275700|ENST00000619387|AATF 12.531546534597751 0.4974689918368763 5 [Q{I|L}]{I|L} 3 6 23.264 0.0 0.0 2.1854 0.0 0.0 0.0 707.2807303581359 707.2807303581359 8.047463015036158 0.0 0.0 0.0 0 0.0 2.0 0.0 0.1803115997617927 [Q{I|L}]{I|L} 2.1854 - 226 1 2.036 133295.0 0.6000000238418579 3968 4355 8311 SUDHL4_400M_050219_1,8325 SUDHL4_400M_050219_1,8325,QICQSINFL False False QLLEGRIKL 44.399714 535.2707 398432.65625 8311.0 ENSG00000275700|ENST00000619387|AATF 2.0307299196720123 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8326 44.414 800.0 111630.0 25 0 10297.0 + -1 IIKLRRFML 9 123 603.3828983073881 0 603.3824951052666 PEAK CID FTMS 0 0 0 8311 127141.640625 1.0 0 0.0 15 Oxidation (M) _IIKLRRFM(Oxidation (M))L_ REV__ENSG00000181555|ENST00000409792|SETD2;REV__ENST00000431180.5_1_3:47122459-47155398:-|nuORF 2.302733041254933 0.3444685223463735 5 Q 1 -1 5.4846 0.0 0.0 0.45524 0.0 0.0 730.5297603825512 343.1516207330688 1073.68138111562 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.45524 - 43 + 1 2.036 69708.5 0.5799999833106995 3969 4355 8311 SUDHL4_400M_050219_1,8326 SUDHL4_400M_050219_1,8326,IIKLRRFML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8327 44.429 800.0 84245.0 25 0 6567.9 13318 HLARQFKAIK 10 112 606.3699348683681 1210.725316803536 2 606.3696166872978 MULTI CID FTMS 0 0 0 8311 111646.6484375 0.3422399119391651 -4 0.1814613342285156 16 Unmodified _HLARQFKAIK_ ENSG00000130558|ENST00000371793|OLFM1;nc|ENSG00000130558|Q99784-3|OLFM1;nc|ENSG00000130558|Q99784-5|OLFM1 3.944395688203298 0.708391353636983 5 Y 1 10 11.99 0.0 0.0 0.99029 0.0 0.0 1029.651035042597 0.0 1029.651035042597 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.99029 - 35 + 1 2.036 51178.9 0.5400000214576721 3970 4355 8311 SUDHL4_400M_050219_1,8327 SUDHL4_400M_050219_1,8327,HLARQFKAIK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8328 44.442 800.0 125310.0 25 0 9499.5 + 14898 ILLENFSAEK 10 138 582.3196000498903 1162.6246471665804 2 582.3235961794853 MULTI CID FTMS 0 0 0 8311 116887.5 0.0994848724160503 7 -0.6777191162109375 17 Unmodified _ILLENFSAEK_ ENST00000560979.1_1_15:49715501-49715549:+|nuORF 21.799462835604743 0.4789045305445478 5 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SNT{I|L} 10 3 + 86.39 0.0 0.0 7.4306 7.4306 92.635 0.0 0.0 0.0 61.95275310591013 12.05066822622348 12.05066822622348 9.164539485499262 0 1.579689690656103 2.0 0.2887254899964357 0.2614393726401688 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SNT{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SNT{I|L};{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SGGT{I|L};{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}S{[CP]|[EA]}K;{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}S{[TV]|[{I|L}S]}Q;{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SGGT{I|L};{I|L}{I|L}{I|L}E{I|L}{[CT]|[{M(Oxidation (M))|F}G]}Y[VP];{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}S{[CP]|[EA]}K;{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}S{[TV]|[{I|L}S]}Q;{I|L}{I|L}{I|L}EM[VS]Y[VP] 7.4306;6.6423;6.4174;5.8638;5.7046;5.6323;5.5174;5.0755;4.9163;4.7709 -;-;-;+;-;-;-;-;-;- + 617 + 1 2.036 77179.9 0.5600000023841858 3971 4355 8311 SUDHL4_400M_050219_1,8328 SUDHL4_400M_050219_1,8328,ILLENFSAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8329 44.456 800.0 116230.0 25 0 11381.0 + 17390 KMIEDLQNEL 10 151 616.8133756596112 1231.6121983860223 2 616.8135253787041 MULTI CID FTMS 0 0 0 8311 84134.765625 0.1668504059782527 4 -0.4247817993164062 18 Unmodified _KMIEDLQNEL_ ENSG00000198887|ENST00000361138|SMC5 15.738622578938676 0.5834632108994704 5 ED{I|L}QNE{I|L} 7 3 38.18 0.0 0.0 3.1 0.0 0.0 372.2194386212906 0.0 372.2194386212906 0.0 20.165512121465063 0.0 0.0 0 0.0 0.0 0.0 0.0 + ED{I|L}QNE{I|L} 3.1 + + 749 1 2.036 71972.0 0.5199999809265137 3972 4355 8311 SUDHL4_400M_050219_1,8329 SUDHL4_400M_050219_1,8329,KMIEDLQNEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8330 44.465 400.0 498260.0 25 0 119040.0 -1 0 136 459.304945107374 458.297668640774 1 459.3042175173759 MULTI CID FTMS 0 0 0 8311 224850.703125 1.0 0 0.0 19 5 {I|L} 1 -1 11.99 0.0 0.0 2.6161 0.0 0.0 327.2024670800302 0.0 327.2024670800302 0.0 2.311989989494778 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.6161 - 54 + 1 2.036 153675.2 1.0 3973 4355 8311 SUDHL4_400M_050219_1,8330 SUDHL4_400M_050219_1,8330, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8331 44.478 800.0 103670.0 25 0 5492.9 -1 0 114 959.1136224825236 2874.319038047771 3 959.7812377810478 MULTI CID FTMS 0 0 0 8311 210417.09375 0.1784756615531549 7 -0.6777191162109375 20 5 [MN]MAS 5 -1 34.437 0.0 0.0 1.1981 0.0 0.0 0.0 2337.086691530676 2337.086691530676 6.416506143517751 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MN]MAS 1.1981 - 2613 + 1 2.036 61007.4 0.6399999856948853 3974 4355 8311 SUDHL4_400M_050219_1,8331 SUDHL4_400M_050219_1,8331, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8333 44.483 16.0 3311300.0 25 0 1052600.0 + 18847 LASPHSPIL 9 64 467.7715667304769 933.5285805277538 2 467.7719299197197 MULTI CID FTMS 0 0 0 8332 2493637.5 0.1459547678133136 4 -0.3599472045898437 1 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 36.04419817259434 0.0971720506436186 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 9 3 + 45.123 0.0 0.0 4.8336 4.8336 87.905 0.0 0.0 0.0 5.642492736872597 31.93574972449312 5.642492736872597 10.902595205268938 0 0.9247425010840048 0.0 1.274227503252014 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};[TA][VP]H[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VP{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA][PS]{I|L}{I|L} 4.8336;3.6657;3.656;3.6299 -;-;-;- 142 1 2.071 47993.5 1.0 3975 4356 8332 SUDHL4_400M_050219_1,8333 SUDHL4_400M_050219_1,8333,LASPHSPIL True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8334 44.484 21.0 2538700.0 25 0 621370.0 + 42465 VTGLGPRR 8 56 428.26173283445326 854.5089127357065 2 428.2618591189384 MULTI CID FTMS 0 0 0 8332 2253829.75 0.3663369655824478 1 -0.0996665954589843 2 Unmodified _VTGLGPRR_ REV__ENSG00000134698|ENST00000373210|AGO4;REV__ENST00000252506.10_1_9:92221290-92221356:+|nuORF 0.6903765706972694 0.8201419426409876 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.071 48792.1 1.0 3976 4356 8332 SUDHL4_400M_050219_1,8334 SUDHL4_400M_050219_1,8334,VTGLGPRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8335 44.485 19.0 4975300.0 25 0 537350.0 + 9610 FLLDKKIGV 9 86 516.8256841567213 1031.6368153802423 2 516.8265258669853 MULTI CID FTMS 0 0 0 8332 2535619.0 0.8011239536984408 -1 0.174224853515625 3 Unmodified _FLLDKKIGV_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 26.268140514670165 0.1969607489560049 5 {M(Oxidation (M))|F}{I|L}{I|L}DKV[KG]{I|L} 9 3 + 45.851 0.0 0.0 4.4445 4.4445 76.267 0.0 0.0 0.0 12.825834421237516 0.9421249706470292 0.9421249706470292 0.5237875363565792 0 0.4247425010840047 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}{I|L}DKV[KG]{I|L};{M(Oxidation (M))|F}{I|L}VEKV[KG]{I|L};{M(Oxidation (M))|F}{I|L}{I|L}DKK{I|L}GV;{M(Oxidation (M))|F}{I|L}VEKK{I|L}GV;{M(Oxidation (M))|F}{I|L}{I|L}DKV[KA]V;{M(Oxidation (M))|F}{I|L}VEKV[KA]V;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}K{I|L}{M(Oxidation (M))|F}{I|L}R;{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}{I|L}{M(Oxidation (M))|F}{I|L}R;KK{I|L}D{I|L}{M(Oxidation (M))|F}{I|L}R;KKD{I|L}{I|L}{M(Oxidation (M))|F}{I|L}R 4.4445;4.3938;4.3159;4.2652;4.0804;4.0296;2.9626;2.5768;2.4385;2.3445 -;-;+;-;-;-;-;-;-;- + 461 + 1 2.071 76289.4 1.0 3977 4356 8332 SUDHL4_400M_050219_1,8335 SUDHL4_400M_050219_1,8335,FLLDKKIGV False True FLLDKKIGV 44.485416 516.826525866985 40687960.0 8332.0 nc|ENSG00000166226|P78371-2|CCT2;;ENSG00000166226|ENST00000299300|CCT2 6.411277453104655 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8336 44.487 36.0 1628100.0 25 0 399100.0 + 42922 VVRGKRGT 8 77 436.7749490625649 0 436.7749816775322 PEAK CID FTMS 0 0 0 8332 1937803.25 0.578215028910703 1 -0.0996665954589843 4 Unmodified _VVRGKRGT_ REV__ENSG00000064932|ENST00000361757|SBNO2;REV__ENSG00000139697|ENST00000602398|SBNO1;REV__nc|ENSG00000064932|Q9Y2G9-3|SBNO2;REV__nc|ENSG00000139697|A3KN83-2|SBNO1;REV__nc|ENSG00000139697|A3KN83-3|SBNO1 0.6014990680409731 0.5987038357115059 5 P 1 -1 1.5938 0.0 0.0 0.18287 0.0 0.0 651.4034767610689 120.05104242496328 771.4545191860321 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.18287 - 2 + 1 2.071 52123.5 1.0 3978 4356 8332 SUDHL4_400M_050219_1,8336 SUDHL4_400M_050219_1,8336,VVRGKRGT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8337 44.488 52.0 1355800.0 25 0 319260.0 43304 WKVMERIK 8 85 545.3165761791628 1088.6185994251257 2 545.3169433474541 MULTI CID FTMS 0 0 0 8332 1102954.875 0.3343629511299308 6 -0.5034942626953125 5 Unmodified _WKVMERIK_ ENSG00000120784|ENST00000684514|ZFP30 2.059750862983233 0.8118298629782807 5 {I|L} 1 7 8.7724 0.0 0.0 0.80583 0.0 0.0 957.5233826055928 0.0 957.5233826055928 0.0 0.2337170177116299 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.80583 + + 7 + 1 2.071 62452.4 1.0 3979 4356 8332 SUDHL4_400M_050219_1,8337 SUDHL4_400M_050219_1,8337,WKVMERIK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8338 44.489 57.0 1197200.0 25 0 272990.0 + -1 WQLTMKKKV 9 76 589.34291497251 1176.67127701182 2 589.3432494997978 MULTI CID FTMS 0 0 0 8332 999160.3125 0.8437416280629546 -1 0.174224853515625 6 Oxidation (M) _WQLTM(Oxidation (M))KKKV_ REV__ENST00000466094.5_1_7:107220736-107227893:+|nuORF;REV__ENST00000486326.5_1_7:107220736-107234551:+|nuORF 0.6014990680409731 0.8936861360942873 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.071 57324.2 1.0 3980 4356 8332 SUDHL4_400M_050219_1,8338 SUDHL4_400M_050219_1,8338,WQLTMKKKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8339 44.491 65.0 665970.0 25 0 108120.0 + 9709 FLTNKDKLK 9 71 553.8303356439183 1105.6461183546364 2 553.8305541872978 MULTI CID FTMS 0 0 0 8332 706561.0625 0.5567900400328174 6 -0.5034942626953125 7 Unmodified _FLTNKDKLK_ REV__ENSG00000101596|ENST00000320876|SMCHD1;REV__nc|ENSG00000101596|A6NHR9-2|SMCHD1 6.723162845929126 0.6799819581413107 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH][RH]K{I|L} 8 -1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH][RH]K + + 11.42 -12.721 -1.3053 1.0329 1.0329 52.57 0.0 0.0 0.0 0.0 -5.033666913294841 -5.033666913294841 0.0 0 0.0 0.0 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH][RH]K{I|L} 1.0329 - 12 + 1 2.071 40667.6 1.0 3981 4356 8332 SUDHL4_400M_050219_1,8339 SUDHL4_400M_050219_1,8339,FLTNKDKLK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8340 44.493 91.0 861030.0 25 0 118820.0 + 13148 HFKSTIGPI 9 111 500.2842498427383 998.5539467522766 2 500.2829772830009 MULTI CID FTMS 0 0 0 8332 454414.9375 0.3936545113011147 3 -0.2505569458007812 8 Unmodified _HFKSTIGPI_ REV__ENSG00000180773|ENST00000326402|SLC36A4;REV__ENST00000526735.1_1_11:92887247-92899179:-|nuORF;REV__ENST00000527503.1_1_11:92881705-92887463:-|nuORF;REV__nc|ENSG00000180773|Q6YBV0-2|SLC36A4 11.640296217721598 0.521594087909532 5 {M(Oxidation (M))|F} 1 -1 13.099 0.0 0.0 1.3118 0.0 0.0 833.474629590947 0.0 833.474629590947 0.0 2.261488354973152 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3118 + + 58 + 1 2.071 63406.1 1.0 3982 4356 8332 SUDHL4_400M_050219_1,8340 SUDHL4_400M_050219_1,8340,HFKSTIGPI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8341 44.495 103.0 744790.0 25 0 118570.0 41098 VNKPLGPATF 10 107 522.2958170662661 1042.577081199332 2 522.2961913943291 MULTI CID FTMS 0 0 0 8332 370435.1875 0.1894676007101547 6 -0.5034942626953125 9 Unmodified _VNKPLGPATF_ ENST00000369702.4_1_1:112297953-112298097:+|nuORF 6.723162845929126 0.6955379296933136 5 {M(Oxidation (M))|F} 1 9 12.764 0.0 0.0 1.2243 0.0 0.0 877.4977792967915 0.0 877.4977792967915 0.0 3.729832835061213 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.2243 + + 29 + 1 2.071 61668.8 1.0 3983 4356 8332 SUDHL4_400M_050219_1,8341 SUDHL4_400M_050219_1,8341,VNKPLGPATF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8342 44.498 110.0 317520.0 25 0 27884.0 23761 LVAHPTLIDP 10 75 538.3089618742939 1074.6033708153875 2 538.3088256716728 MULTI CID FTMS 0 0 0 8332 350383.4375 0.2233080599521895 6 -0.5034942626953125 10 Unmodified _LVAHPTLIDP_ ENSG00000158966|ENST00000651257|CACHD1;nc|ENSG00000158966|Q5VU97-2|CACHD1 6.723162845929126 0.6955379296933136 5 {I|L} 1 9 10.379 0.0 0.0 0.96581 0.0 0.0 943.5081082194878 0.0 943.5081082194878 0.0 10.37860356969059 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.96581 + + 12 + 1 2.071 31675.5 1.0 3984 4356 8332 SUDHL4_400M_050219_1,8342 SUDHL4_400M_050219_1,8342,LVAHPTLIDP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8343 44.506 490.0 214250.0 25 0 32686.0 + 16104 ITSLRSLFLT 10 128 575.8432377057429 1149.6719224782858 2 575.8433105349541 MULTI CID FTMS 0 0 0 8332 231151.9375 0.0945396644043867 -6 0.4778785705566406 11 Unmodified _ITSLRSLFLT_ REV__ENSG00000101191|ENST00000395343|DIDO1;REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1 3.5964929083625545 0.7100006075494749 5 {I|L} 1 -1 9.9148 0.0 0.0 0.86241 0.0 0.0 1018.5769040230108 0.0 1018.5769040230108 0.0 1.1911958290226288 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.86241 + + 83 + 1 2.071 81747.0 1.0 3985 4356 8332 SUDHL4_400M_050219_1,8343 SUDHL4_400M_050219_1,8343,ITSLRSLFLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8344 44.511 246.0 305600.0 25 0 26068.0 11095 GEEIFFFC 8 113 496.2150722945809 990.415591655962 2 496.2151672244072 MULTI CID FTMS 0 0 0 8332 199308.671875 1.0 0 0.0 12 Unmodified _GEEIFFFC_ ENSG00000163719|ENST00000296003|MTMR14;ENST00000414996.1_1_3:9710441-9730764:+|nuORF;nc|ENSG00000163719|Q8NCE2-2|MTMR14;nc|ENSG00000163719|Q8NCE2-3|MTMR14 8.593279151180031 0.7721714526254883 5 [{I|L}V]ADE{I|L} 6 7 25.072 0.0 0.0 2.5314 0.0 0.0 0.0 347.04648700191814 347.04648700191814 4.807583626829274 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]ADE{I|L} 2.5314 - 305 1 2.071 60835.2 1.0 3986 4356 8332 SUDHL4_400M_050219_1,8344 SUDHL4_400M_050219_1,8344,GEEIFFFC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8345 44.515 254.0 183160.0 25 0 17687.0 + 13129 HFHPLLIFL 9 96 568.8350488098255 1135.6555446864509 2 568.8353149294853 MULTI CID FTMS 0 0 0 8332 200014.296875 0.1279619166973087 -6 0.4778785705566406 13 Unmodified _HFHPLLIFL_ REV__ENST00000453011.5_1_1:101538218-101538350:+|nuORF 2.302733041254933 0.8342969208511092 5 {I|L}H{I|L}{I|L} 4 -1 16.198 0.0 0.0 1.4263 0.0 0.0 641.3154259235495 0.0 641.3154259235495 0.0 2.703037561203842 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}H{I|L}{I|L} 1.4263 - 10 1 2.071 40751.4 1.0 3987 4356 8332 SUDHL4_400M_050219_1,8345 SUDHL4_400M_050219_1,8345,HFHPLLIFL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8346 44.52 218.0 263790.0 25 0 15389.0 + 11760 GLKEGIPAL 9 95 449.27457608596393 896.5345992387279 2 449.2763854861259 MULTI CID FTMS 0 0 0 8332 176567.9375 0.2615888146771158 3 -0.2505569458007812 14 Unmodified _GLKEGIPAL_ ENSG00000167658|ENST00000309311|EEF2 32.30548876998284 0.1201446275138228 5 [VS]{I|L}[NP]VVG{I|L} 9 8 + 30.155 0.0 0.0 3.3636 3.3636 75.651 0.0 0.0 0.0 2.0732594320775632 4.454321750294671 2.0732594320775632 2.0732594320775632 0 0.4247425010840047 0.0 0.3054621874040891 0.0 [VS]{I|L}[NP]VVG{I|L};[PA][Q{I|L}]TVVG{I|L};[VS]{I|L}Q{[VA]|[{I|L}G]}PA{I|L} 3.3636;3.1323;1.3545 -;-;- 143 1 2.071 50151.8 1.0 3988 4356 8332 SUDHL4_400M_050219_1,8346 SUDHL4_400M_050219_1,8346,GLKEGIPAL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8347 44.533 800.0 153620.0 25 0 11209.0 + + 40011 KLGDIMGV 8 142 416.7334087250683 831.4522645169366 2 416.7335693240166 MULTI CID FTMS 0 0 0 8332 87285.984375 0.2744420202671268 -1 0.174224853515625 15 Unmodified _VGEKLMGV_ ENSG00000140829|ENST00000268482|DHX38;ENST00000566329.1_1_16:72134993-72137705:+|nuORF 34.10243960390752 0.3329570729325616 5 [VG]EK{I|L}MGV 8 -1 + 53.025 0.0 0.0 6.3774 6.3774 89.102 0.0 0.0 0.0 15.651712939895049 39.045452715668446 15.651712939895049 8.26606256887672 0 1.0172203223519531 2.0 0.2887254899964357 0.0 [VG]EK{I|L}MGV;[VG]EKM{I|L}GV;[K{I|L}]GD{I|L}MGV;[K{I|L}]GDM{I|L}GV;[K{I|L}]{[CA]|SS}E{I|L}GV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TA]Q{I|L}GV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[TA][AG]{I|L}GV;[K{I|L}]G{[TV]|[{I|L}S]}[WE] 6.3774;5.3832;4.2241;3.2299;2.5543;2.2377;1.1237;0.46796 +;-;-;-;-;-;-;- + 152 1 2.071 99272.4 0.9100000262260436 3989 4356 8332 SUDHL4_400M_050219_1,8347 SUDHL4_400M_050219_1,8347,VGEKLMGV False False KLGDIMGV 44.53343 416.733569324017 1826153.5 8332.0 ENSG00000140829|ENST00000268482|DHX38;;ENST00000566329.1_1_16:72134993-72137705:+|nuORF 4.614315191904704 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8348 44.547 785.0 313440.0 25 0 17743.0 + 38062 TPGSAIVEVP 10 94 969.5256768588744 968.5184003922744 1 971.5300781130792 MULTI CID FTMS 0 0 0 8332 311393.53125 1.0 0 0.0 16 Unmodified _TPGSAIVEVP_ REV__ENSG00000168237|ENST00000436784|GLYCTK;REV__ENST00000489173.1_1_3:52325707-52327139:+|nuORF;REV__nc|ENSG00000168237|Q8IVS8-3|GLYCTK;REV__nc|ENSG00000168237|Q8IVS8-4|GLYCTK;REV__nc|ENSG00000168237|Q8IVS8-5|GLYCTK 32.78568957990786 0.2337485590374503 5 {[QG]|[NA]}V{I|L}EVEVP 9 -1 + 55.16 0.0 0.0 5.6953 5.6953 82.203 0.0 0.0 0.0 9.647642715192504 17.834778045573074 9.647642715192504 2.218487496163561 0 0.805462187404089 0.0 0.5554621874040891 0.25 {[QG]|[NA]}V{I|L}EVEVP;{[QG]|[NA]}V{I|L}EVVEP;{[QG]|[NA]}{I|L}VEVEVP;{[QG]|[NA]}{I|L}VEVVEP;{[QG]|[NA]}VE{I|L}VEVP;{[QG]|[NA]}{I|L}EVVEVP;{[QG]|[NA]}VE{I|L}VVEP;{[QG]|[NA]}{I|L}EVVVEP;{[QG]|[NA]}{I|L}D{I|L}VEVP;{[QN]|[E{I|L}]|[KN]}V{[QG]|[NA]}VEVP 5.6953;5.4663;5.3718;5.1428;5.0737;5.061;4.8447;4.832;4.7502;4.5539 -;-;-;-;-;-;-;-;-;- 2421 1 2.071 160158.2 1.0 3990 4356 8332 SUDHL4_400M_050219_1,8348 SUDHL4_400M_050219_1,8348,TPGSAIVEVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8349 44.55 178.0 496520.0 25 0 127680.0 -1 0 103 479.24812535517776 478.2408488885778 1 479.2478820681572 MULTI CID FTMS 0 0 0 8332 169520.40625 0.2054905200117764 3 -0.2505569458007812 17 5 [YT]PV 4 -1 + 17.435 0.0 0.0 3.6457 3.6457 79.488 0.0 0.0 0.0 1.1978875828839364 4.23068542991258 1.1978875828839364 5.2185493026738285 0 0.4247425010840047 0.0 0.0 0.0 [YT]PV;{[CP]|[EA]}{M(Oxidation (M))|F}{I|L};VV{[{M(Oxidation (M))|F}D]|MM};[Y{I|L}][PS] 3.6457;2.5545;2.378;0.72513 -;-;-;- 20 + 1 2.071 71060.4 1.0 3991 4356 8332 SUDHL4_400M_050219_1,8349 SUDHL4_400M_050219_1,8349, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8350 44.564 705.0 647260.0 25 0 82437.0 + 37516 TLHALTCTY 9 221 511.7522073097876 1021.4898616863752 2 511.7528564333916 MULTI CID FTMS 0 0 0 8332 155150.015625 0.984414496199938 -1 0.174224853515625 18 Unmodified _TLHALTCTY_ REV__ENST00000553838.5_1_14:77794152-77794503:+|nuORF 23.1484247019978 0.2366544122328345 5 [{I|L}T][{M(Oxidation (M))|F}T]VDT[EP] 9 -1 + 43.35 0.0 0.0 4.2438 4.2438 75.959 0.0 0.0 0.0 10.587549631438392 0.5365021441028972 0.5365021441028972 0.8361343778773289 0 0.0 2.0 0.6237125054200234 0.0 [{I|L}T][{M(Oxidation (M))|F}T]VDT[EP];[{I|L}T][{M(Oxidation (M))|F}T]VDPET;[{I|L}T][{M(Oxidation (M))|F}T]DVT[EP];[{I|L}T][{M(Oxidation (M))|F}T]VS{M(Oxidation (M))|F}AH;[{I|L}T][{M(Oxidation (M))|F}T]DVPET;[{I|L}T][{M(Oxidation (M))|F}T]VSE[EP];[{I|L}T][{M(Oxidation (M))|F}T]DTV[EP];[{I|L}T]D[H{I|L}]{I|L}CAH;[{I|L}T]DYR{M(Oxidation (M))|F}AH;[{I|L}T][{M(Oxidation (M))|F}T]DT{I|L}[DP] 4.2438;4.162;3.9491;3.9137;3.8673;3.8542;3.7767;3.7723;3.6908;3.6824 -;-;-;-;-;-;-;-;-;- 4928 1 2.071 339770.1 1.0 3992 4356 8332 SUDHL4_400M_050219_1,8350 SUDHL4_400M_050219_1,8350,TLHALTCTY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8351 44.578 800.0 85510.0 25 0 13732.0 -1 0 59 1178.1506521924373 3531.430127177512 3 1178.815844714642 MULTI CID FTMS 0 0 0 8332 154147.625 0.2267889259019398 5 -0.4619903564453125 19 5 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.13037 0.0 0.0 2736.009669269112 645.3217666633893 3381.3314359325013 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.13037 - 48 + 1 2.071 57357.8 0.3799999952316284 3993 4356 8332 SUDHL4_400M_050219_1,8351 SUDHL4_400M_050219_1,8351, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8353 44.584 98.0 554410.0 25 0 60256.0 + 13256 HIIENIVAV 9 82 504.29792098657487 1006.5812890399498 2 504.2980529665947 MULTI CID FTMS 0 0 0 8352 315174.40625 0.0519621862375745 4 -0.3623237609863281 1 Unmodified _HIIENIVAV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 30.63653989081413 0.1413794767160703 5 [H{I|L}]{I|L}EN{I|L}V{[VA]|[{I|L}G]} 9 0 + 51.321 0.0 0.0 5.0986 5.0986 87.32 0.0 0.0 0.0 17.86098023303616 37.341824846900806 17.86098023303616 9.208187539523747 0 0.5 1.2218487496163564 0.0 0.0 + + [H{I|L}]{I|L}EN{I|L}V{[VA]|[{I|L}G]};[H{I|L}]{I|L}EGG{I|L}V{[VA]|[{I|L}G]};[H{I|L}][RP]C{I|L}[R{I|L}] 5.0986;4.1838;2.2704 +;-;- + 134 1 2.074 43985.2 1.0 3994 4357 8352 SUDHL4_400M_050219_1,8353 SUDHL4_400M_050219_1,8353,HIIENIVAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8354 44.587 152.0 261940.0 25 0 26220.0 38697 TTPVKITLT 9 80 487.30012437302486 972.5856958128496 2 487.3004028201103 MULTI CID FTMS 0 0 0 8352 236623.046875 0.0599657072834575 4 -0.3623237609863281 2 Unmodified _TTPVKITLT_ ENSG00000139970|ENST00000267484|RTN1 19.256988751693697 0.3154191944385105 5 {[DS]|[MA]|[CV]|TT}PK{I|L}VTT{I|L} 9 4 {[DS]|[MA]|[CV]|TT}PK{I|L}VT + + 18.201 29.201 3.9437 1.8714 1.8714 52.79 0.0 0.0 0.0 0.0 -16.641974908773925 -16.641974908773925 0.0 0 0.0 0.0 0.3252574989159953 0.0 {[DS]|[MA]|[CV]|TT}PK{I|L}VTT{I|L} 1.8714 - 96 + 1 2.074 34188.3 1.0 3995 4357 8352 SUDHL4_400M_050219_1,8354 SUDHL4_400M_050219_1,8354,TTPVKITLT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8355 44.588 53.0 986410.0 25 0 212770.0 27207 PGKELKVLSY 10 63 567.3297886536056 1132.6450243740112 2 567.3300048708916 MULTI CID FTMS 0 0 0 8352 1174738.5 0.3794321994694357 -4 0.3690834045410156 3 Unmodified _PGKELKVLSY_ ENSG00000164308|ENST00000437043|ERAP2;nc|ENSG00000164308|Q6P179-2|ERAP2;nc|ENSG00000164308|Q6P179-3|ERAP2;nc|ENSG00000164308|Q6P179-4|ERAP2 1.6526216038709556 0.7189921496796233 5 Y 1 9 11.109 0.0 0.0 0.98082 0.0 0.0 951.5705442488144 0.0 951.5705442488144 0.0 11.10924374808178 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.98082 + + 1 + 1 2.074 44840.2 1.0 3996 4357 8352 SUDHL4_400M_050219_1,8355 SUDHL4_400M_050219_1,8355,PGKELKVLSY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8356 44.59 55.0 798080.0 25 0 207080.0 + 1416 ALDKATVLL 9 64 472.2948828547759 942.5752127763518 2 472.2947875857353 MULTI CID FTMS 0 0 0 8352 1051665.375 0.539612986696129 -2 0.2738914489746094 4 Unmodified _ALDKATVLL_ ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4 43.85829265575387 0.0542763391141878 5 [{I|L}A]AATATV{I|L}{I|L} 10 3 + 59.046 0.0 0.0 6.2643 6.2643 87.817 0.0 0.0 0.0 16.478174818886373 29.124628150806373 16.478174818886373 6.53212513775344 0 0.8182503180159344 1.6989700043360187 1.1989700043360187 0.0 [{I|L}A]AATATV{I|L}{I|L};[{I|L}A]{[TV]|[{I|L}S]}NTV{I|L}{I|L};[{I|L}A]{[TV]|[{I|L}S]}SQV{I|L}{I|L};[{I|L}A]AATA{I|L}S{I|L}{I|L};[{I|L}A]MRRA{I|L}{I|L};[{I|L}A]AATS{I|L}A{I|L}{I|L};[{I|L}A]{[TV]|[{I|L}S]}GGTV{I|L}{I|L};[{I|L}A]{[TV]|[{I|L}S]}S[AG]V{I|L}{I|L};[{I|L}A]{[TV]|[{I|L}S]}N{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}[{I|L}A]NTV{I|L}{I|L} 6.2643;5.5713;5.5199;5.175;4.9083;4.7499;4.5944;4.543;4.482;4.2939 -;-;-;-;-;-;-;-;-;- 431 1 2.074 38646.2 1.0 3997 4357 8352 SUDHL4_400M_050219_1,8356 SUDHL4_400M_050219_1,8356,ALDKATVLL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8357 44.591 50.0 888820.0 25 0 140230.0 + 23376 LTDPDIHVL 9 66 511.77992544400064 1021.5452979548012 2 511.7795898318291 MULTI CID FTMS 0 0 0 8352 1027438.75 0.4568871280330748 -2 0.2738914489746094 5 Unmodified _LTDPDIHVL_ ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7 28.486842064014134 0.1687311288560894 5 [{I|L}T][{M(Oxidation (M))|F}T]VDT 7 7 40.718 0.0 0.0 3.9859 0.0 0.0 0.0 241.15727240232005 241.15727240232005 25.03160730965476 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 [{I|L}T][{M(Oxidation (M))|F}T]VDT 3.9859 - 323 1 2.074 38985.5 1.0 3998 4357 8352 SUDHL4_400M_050219_1,8357 SUDHL4_400M_050219_1,8357,LTDPDIHVL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8358 44.593 96.0 242450.0 25 0 23242.0 122 AALAIKYQEL 10 57 560.3219541867511 1118.629355440302 2 560.3231078982353 MULTI CID FTMS 0 0 0 8352 520240.0625 0.3502110309999061 -3 0.3476295471191406 6 Unmodified _AALAIKYQEL_ ENSG00000176428|ENST00000324941|VPS37D 1.6526216038709556 0.7189921496796233 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.074 25402.7 1.0 3999 4357 8352 SUDHL4_400M_050219_1,8358 SUDHL4_400M_050219_1,8358,AALAIKYQEL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8359 44.595 101.0 310840.0 25 0 16713.0 27079 PEVVQPTTV 9 76 485.2659790840085 968.5174052348168 2 485.2653381228447 MULTI CID FTMS 0 0 0 8352 467978.78125 1.0 0 0.0 7 Unmodified _PEVVQPTTV_ ENSG00000182810|ENST00000332395|DDX28 16.942295170755138 0.3780752226737986 5 [EP]V 3 6 24.181 0.0 0.0 2.4967 0.0 0.0 0.0 640.3304294870231 640.3304294870231 9.985287152449231 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + [EP]V 2.4967 + + 65 1 2.074 29111.9 1.0 4000 4357 8352 SUDHL4_400M_050219_1,8359 SUDHL4_400M_050219_1,8359,PEVVQPTTV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8360 44.599 199.0 162170.0 25 0 21325.0 + 103 AAIHPSLEI 9 62 475.7690726276885 949.523592322177 2 475.7689697146416 MULTI CID FTMS 0 0 0 8352 251987.203125 0.2901154857867853 2 -0.1508903503417968 8 Unmodified _AAIHPSLEI_ ENSG00000141127|ENST00000268835|PRPSAP2;nc|ENSG00000141127|O60256-2|PRPSAP2;nc|ENSG00000141127|O60256-3|PRPSAP2;nc|ENSG00000141127|O60256-4|PRPSAP2 21.74664581756881 0.2544899275067181 5 T{I|L}E{I|L} 4 6 38.928 0.0 0.0 4.0997 0.0 0.0 475.2607594220719 0.0 475.2607594220719 0.0 34.94850021680094 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 T{I|L}E{I|L} 4.0997 - 44 1 2.074 32619.9 1.0 4001 4357 8352 SUDHL4_400M_050219_1,8360 SUDHL4_400M_050219_1,8360,AAIHPSLEI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8361 44.603 185.0 260590.0 25 0 30029.0 + 7673 EKLKISSMI 9 82 524.808480439451 1047.602407945702 2 524.8091918826103 MULTI CID FTMS 0 0 0 8352 225875.453125 0.4804201913528128 1 -0.11627197265625 9 Unmodified _EKLKISSMI_ REV__ENSG00000213398|ENST00000264005|LCAT 4.3292370932331545 0.7635526921153418 5 Y{I|L} 2 -1 13.979 0.0 0.0 1.3344 0.0 0.0 753.4437908576145 0.0 753.4437908576145 0.0 -0.6402378467688496 -0.6402378467688496 0.0 0 0.0 0.0 0.0 0.0 Y{I|L} 1.3344 - 115 + 1 2.074 45175.2 1.0 4002 4357 8352 SUDHL4_400M_050219_1,8361 SUDHL4_400M_050219_1,8361,EKLKISSMI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8362 44.61 386.0 342730.0 25 0 16056.0 + -1 CCRRRCRRHRR 11 127 864.9406533299232 1727.8667537266465 2 864.9401733279228 MULTI CID FTMS 0 0 0 8352 217738.0 0.9602066928496352 -1 0.0996665954589843 10 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))RRRC(Carbamidomethyl (C))RRHRR_ REV__ENSG00000184560|ENST00000333870|SPEM2 0.0 0.8751479354844584 5 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ{[CP]|[EA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Q 15 -1 + 104.92 0.0 0.0 6.0724 6.0724 86.497 0.0 0.0 0.0 37.7047151249014 7.78073953186599 7.78073953186599 5.255762612236907 0 1.274227503252014 2.0 2.2856668758921828 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ{[CP]|[EA]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ{[CP]|[EA]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ[{I|L}A]E{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NE{[TV]|[{I|L}S]}W[C(Carbamidomethyl (C))Q]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NER{[ET]|[MV]}[C(Carbamidomethyl (C))Q]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NER[RV][C(Carbamidomethyl (C))C]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEARRE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAAAW{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}VGSQDG{M(Oxidation (M))|F}{I|L}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}VGSQDG{M(Oxidation (M))|F}{I|L}QVQ 6.0724;5.7682;5.6959;5.6712;5.6325;5.3143;5.2947;5.2338;5.22;5.1484 -;-;-;-;-;-;-;-;-;- 7093 + 1 2.074 89342.7 1.0 4003 4357 8352 SUDHL4_400M_050219_1,8362 SUDHL4_400M_050219_1,8362,CCRRRCRRHRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8363 44.612 132.0 278170.0 25 0 36038.0 + + -1 ALDDSRFQI 9 66 531.783916582327 1061.553280231454 2 532.7718383669853 MULTI CID FTMS 0 0 0 -1 0 11 Oxidation (M) _LAGM(Oxidation (M))EEKRL_ nc|ENSG00000131018|Q8NF91-9|SYNE1;nc|ENSG00000131018|Q8NF91-2|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;nc|ENSG00000131018|Q8NF91-3|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-11|SYNE1;ENST00000460912.6_1_6:152443573-152489284:-|nuORF;ENSG00000131018|ENST00000367255|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1;ENST00000478916.5_1_6:152456172-152464916:-|nuORF 9.347437153973935 0.588369872918737 5 [{I|L}A]G 3 -1 23.557 0.0 0.0 2.2191 0.0 0.0 0.0 817.3872090246758 817.3872090246758 11.338031200885156 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]G 2.2191 + + 17 1 2.074 34674.6 1.0 4004 4357 8352 SUDHL4_400M_050219_1,8363 SUDHL4_400M_050219_1,8363,LAGMEEKRL False False ALDDSRFQI 44.612296 532.771838366985 1523195.5 8352.0 nc|ENSG00000131018|Q8NF91-9|SYNE1;;nc|ENSG00000131018|Q8NF91-2|SYNE1;;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;;nc|ENSG00000131018|Q8NF91-3|SYNE1;;nc|ENSG00000131018|Q8NF91-4|SYNE1;;nc|ENSG00000131018|Q8NF91-11|SYNE1;;ENST00000460912.6_1_6:152443573-152489284:-|nuORF;;ENSG00000131018|ENST00000367255|SYNE1;;nc|ENSG00000131018|Q8NF91-8|SYNE1;;ENST00000478916.5_1_6:152456172-152464916:-|nuORF 2.300469179948171 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8364 44.626 800.0 240990.0 25 0 26110.0 + -1 KLFDDDDSGKISL 13 134 726.8642942979502 1451.7140356627003 2 726.8646728396416 MULTI CID FTMS 0 0 0 8352 185693.0 1.0 0 0.0 12 Carbamidomethyl (C) _IKFSLEEWQC(Carbamidomethyl (C))L_ ENSG00000153140|ENST00000283122|CETN3 27.22323531849824 0.4529927607131788 5 [K{I|L}]{M(Oxidation (M))|F}DDDDSGK{I|L}S{I|L} 13 -1 + 120.37 0.0 0.0 8.2913 8.2913 96.119 0.0 0.0 0.0 2.208963166691732 78.65495334951716 2.208963166691732 12.302046884880935 0 3.353917193908117 0.0 1.7753187046026266 0.8609243748081781 [K{I|L}]{M(Oxidation (M))|F}DDDDSGK{I|L}S{I|L};[K{I|L}]{M(Oxidation (M))|F}DDDDSG{I|L}KS{I|L};[K{I|L}]{M(Oxidation (M))|F}DDDDSKG{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KDDDSGK{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}KDDDSKG{I|L}S{I|L};{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]DDDSGK{I|L}S{I|L};{I|L}K{M(Oxidation (M))|F}AGSDDD{[RE]|[WV]}S{I|L};[K{I|L}]{M(Oxidation (M))|F}DDDDSGKS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}]DDDSGAG{I|L}S{I|L};{[TV]|[{I|L}S]}[R{M(Oxidation (M))|F}]DDDSKG{I|L}S{I|L} 8.2913;7.4439;7.3921;7.21;6.9996;6.9066;6.8345;6.8218;6.7595;6.6962 -;-;-;-;-;-;-;-;-;- 5096 1 2.074 140293.7 0.8399999737739563 4005 4357 8352 SUDHL4_400M_050219_1,8364 SUDHL4_400M_050219_1,8364,IKFSLEEWQCL False False KLFDDDDSGKISL 44.626127 726.864672839642 1121123.0 8352.0 ENSG00000153140|ENST00000283122|CETN3 7.9342726071675616 2.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8365 44.64 800.0 179340.0 25 0 21340.0 + 31617 RRAAEKLPAR 10 169 584.3568851986632 1166.6992174641264 2 584.3574706912041 MULTI CID FTMS 0 0 0 8352 115743.4453125 0.0602300294597463 -5 0.4139442443847656 13 Unmodified _RRAAEKLPAR_ REV__nc|ENSG00000149295|P14416-2|DRD2 5.731851221503515 0.7001233259664787 5 Y 1 -1 9.0344 0.0 0.0 0.77435 0.0 0.0 985.6245237158828 0.0 985.6245237158828 0.0 0.539526986547596 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.77435 - 61 + 1 2.074 110546.6 0.6200000047683716 4006 4357 8352 SUDHL4_400M_050219_1,8365 SUDHL4_400M_050219_1,8365,RRAAEKLPAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8366 44.649 518.0 250020.0 25 0 27501.0 + 35387 STFDHPELVKL 11 105 643.3409788195332 1284.6674047058664 2 643.8426391482353 MULTI CID FTMS 0 0 0 8352 96702.25 0.57123479577779 -2 0.2738914489746094 14 Unmodified _STFDHPELVKL_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 69.33821966488729 0.0343223916712224 5 {[MG]|[TS]}{M(Oxidation (M))|F}D[{I|L}P]{[YC]|[HE]}VK{I|L} 11 2 + 34.597 0.0 0.0 2.6931 2.6931 72.026 0.0 0.0 0.0 5.862435673934282 0.3218468337140123 0.3218468337140123 0.3218468337140123 0 1.5 0.0 0.7059771852360797 0.4247425010840047 {[MG]|[TS]}{M(Oxidation (M))|F}D[{I|L}P]{[YC]|[HE]}VK{I|L};{[MG]|[TS]}{M(Oxidation (M))|F}D[{I|L}P]{[YC]|[HE]}V{I|L}K;[EP]{I|L}V[VS][{I|L}P]D[WM] 2.6931;2.668;0.23096 -;-;- 320 + 1 2.074 102229.0 1.0 4007 4357 8352 SUDHL4_400M_050219_1,8366 SUDHL4_400M_050219_1,8366,STFDHPELVKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8367 44.651 94.0 610650.0 25 0 48584.0 + 33802 KILPDLNTV 9 104 507.3034843535999 1012.5924157739998 2 507.3057128787041 MULTI CID FTMS 0 0 0 8352 373592.65625 0.1147757941663349 4 -0.3623237609863281 15 Unmodified _SLDLPRLSI_ ENSG00000142207|ENST00000382751|URB1 18.1463463914782 0.3454829746528889 5 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}K{I|L}D{[TV]|[{I|L}S]} 9 5 + 28.259 0.0 0.0 2.7908 2.7908 78.573 0.0 0.0 0.0 6.197887582883936 5.642492736872601 5.642492736872601 6.197887582883936 0 0.0 1.0969100130080565 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}P{I|L}K{I|L}D{[TV]|[{I|L}S]};[DP]{I|L}{I|L}K{I|L}D{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}P{I|L}K{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}P];[K{I|L}]{I|L}[DP]{I|L}D{[TV]|[{I|L}S]};[DP]{I|L}{I|L}K{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}P];[W{M(Oxidation (M))|F}]{I|L}K[HA]{I|L}V;[W{M(Oxidation (M))|F}]{I|L}K[HA]V{I|L};[{I|L}V]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K[HA]{I|L}V;[{I|L}V]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K[HA]V{I|L} 2.7908;2.1787;1.4102;1.2879;0.79816;0.76164;0.56779;0.53722;0.34337 -;-;-;-;-;-;-;-;- 455 1 2.074 48405.8 1.0 4008 4357 8352 SUDHL4_400M_050219_1,8367 SUDHL4_400M_050219_1,8367,SLDLPRLSI False False KILPDLNTV 44.651152 507.305712878704 6643146.0 8352.0 ENSG00000142207|ENST00000382751|URB1 5.898457209269206 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8368 44.659 351.0 254260.0 25 0 22065.0 + 24010 LVYALAFITI 10 133 562.3437079064552 1122.6728628797102 2 562.3433715701103 MULTI CID FTMS 0 0 0 8352 130874.4765625 0.3071056336876575 2 -0.1508903503417968 16 Unmodified _LVYALAFITI_ REV__ENSG00000131480|ENST00000253799|AOC2;REV__nc|ENSG00000131480|O75106-2|AOC2 7.289230182591677 0.6929195370588109 5 WT{I|L} 3 -1 17.906 0.0 0.0 1.595 0.0 0.0 704.4523866607634 0.0 704.4523866607634 0.0 7.068619685938872 0.0 0.0 0 0.0 0.0 0.25 0.0 WT{I|L} 1.595 - 181 + 1 2.074 71194.3 1.0 4009 4357 8352 SUDHL4_400M_050219_1,8368 SUDHL4_400M_050219_1,8368,LVYALAFITI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8369 44.673 800.0 120030.0 25 0 16925.0 -1 0 101 778.4700948800745 777.4628184134745 1 778.4683715701103 MULTI CID FTMS 0 0 0 8352 134500.609375 1.0 0 0.0 17 5 [DV]VYA{I|L} 6 -1 43.082 0.0 0.0 5.5413 0.0 0.0 0.0 114.09377479458696 114.09377479458696 12.688076517011297 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.3054621874040891 0.0 [DV]VYA{I|L} 5.5413 - 368 1 2.074 70249.9 0.6399999856948853 4010 4357 8352 SUDHL4_400M_050219_1,8369 SUDHL4_400M_050219_1,8369, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8370 44.687 800.0 119670.0 25 0 26429.0 + -1 LLCVFKKQIK 10 127 638.8957254522271 1275.776897971254 2 638.8962280154228 MULTI CID FTMS 0 0 0 8352 110839.5390625 1.0 0 0.0 18 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))VFKKQIK_ REV__ENST00000445930.6_1_14:53194439-53194556:+|nuORF 1.6526216038709556 0.7189921496796233 5 {I|L} 1 -1 10.089 0.0 0.0 0.79078 0.0 0.0 1144.6819405511353 0.0 1144.6819405511353 0.0 9.710040265111566 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.79078 + + 131 + 1 2.074 78753.7 0.5600000023841858 4011 4357 8352 SUDHL4_400M_050219_1,8370 SUDHL4_400M_050219_1,8370,LLCVFKKQIK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8371 44.694 424.0 338190.0 25 0 72639.0 -1 KMSKRKKCR 9 117 611.3548497529347 1220.6951465726693 2 611.3546630740166 MULTI CID FTMS 0 0 0 8352 108229.8984375 0.1004409885437725 -8 0.6968040466308594 19 Carbamidomethyl (C) _KMSKRKKC(Carbamidomethyl (C))R_ ENST00000396597.7_1_11:9501061-9516223:+|nuORF 3.944395688203298 0.7769873103969335 5 Y 1 -1 10.837 0.0 0.0 0.88781 0.0 0.0 1039.6212157638786 0.0 1039.6212157638786 0.0 1.629267896945068 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.88781 - 10 + 1 2.074 107955.3 1.0 4012 4357 8352 SUDHL4_400M_050219_1,8371 SUDHL4_400M_050219_1,8371,KMSKRKKCR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8373 44.7 165.0 241920.0 25 0 36958.0 13179 HFYKVFLKI 9 78 597.8564939889404 1193.6984350446808 2 597.8565551638603 MULTI CID FTMS 0 0 0 8372 269483.65625 0.4325175088931274 1 -0.0346183776855468 1 Unmodified _HFYKVFLKI_ ENST00000561512.1_1_16:53495692-53498290:+|nuORF 0.6014990680409731 0.8936861360942873 5 {I|L} 1 8 4.6041 0.0 0.0 0.3857 0.0 0.0 303.40590682378075 774.1898287408811 1077.595735564662 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.3857 + + 1 + 1 2.074 36773.7 1.0 4013 4358 8372 SUDHL4_400M_050219_1,8373 SUDHL4_400M_050219_1,8373,HFYKVFLKI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8374 44.703 154.0 595370.0 25 0 29641.0 -1 0 96 857.9305306134438 1713.8465082936875 2 857.9303466677666 MULTI CID FTMS 0 0 0 8372 322364.34375 0.5442572942701678 1 -0.0346183776855468 2 5 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q 15 -1 + 121.28 0.0 0.0 7.0767 7.0767 93.823 0.0 0.0 0.0 22.270439575226177 12.83809673312028 12.83809673312028 10.18491783126585 0 2.004432191740108 2.0 0.805462187404089 1.9361818737241727 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[RV]W{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADYYV[YK]Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW[RV]W{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDAN[YE][K{I|L}];[KP]VN{I|L}NADQ[{I|L}V][C(Carbamidomethyl (C))C]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QD{[{M(Oxidation (M))|F}C]|[YS]}{I|L}E{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWYYV[YK]Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QD{[{M(Oxidation (M))|F}C]|[YS]}{I|L}N[K{I|L}] 7.0767;6.4824;6.2163;6.018;5.6234;5.264;5.1796;5.1638;5.159;4.9882 -;-;-;-;-;-;-;-;-;- 1912 + 1 2.074 66359.1 1.0 4014 4358 8372 SUDHL4_400M_050219_1,8374 SUDHL4_400M_050219_1,8374, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8375 44.707 184.0 527420.0 25 0 74930.0 + 12092 GQHPNIITL 9 113 496.7799396998256 991.5453264664512 2 496.7801086306572 MULTI CID FTMS 0 0 0 8372 275003.375 0.3931944593504025 -1 0.11627197265625 3 Unmodified _GQHPNIITL_ ENSG00000071242|ENST00000265678|RPS6KA2;ENSG00000072133|ENST00000262752|RPS6KA6;ENSG00000117676|ENST00000374168|RPS6KA1;ENSG00000177189|ENST00000379565|RPS6KA3;ENST00000495332.1_1_X:83359500-83361456:-|nuORF;nc|ENSG00000071242|Q15349-2|RPS6KA2;nc|ENSG00000071242|Q15349-3|RPS6KA2;nc|ENSG00000072133|Q9UK32-2|RPS6KA6;nc|ENSG00000117676|Q15418-2|RPS6KA1;nc|ENSG00000117676|Q15418-3|RPS6KA1;nc|ENSG00000117676|Q15418-4|RPS6KA1 52.268347100219714 0.0353964759249114 5 {[QG]|[NA]}H[NP]{I|L}{I|L}T{I|L} 9 0 + 54.944 0.0 0.0 5.5412 5.5412 84.675 0.0 0.0 0.0 5.558933348155222 43.974856131339166 5.558933348155222 4.771212547196626 0 0.9247425010840048 0.0 0.5 0.9604093769761876 + + {[QG]|[NA]}H[NP]{I|L}{I|L}T{I|L};{[QG]|[NA]}H{I|L}[NP]{I|L}T{I|L};[NP]{I|L}H{[QG]|[NA]}{I|L}T{I|L};{[QG]|[NA]}H[NP]{I|L}T{I|L}{I|L};{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]{I|L}{I|L}T{I|L};{[QG]|[NA]}H{I|L}[NP]T{I|L}{I|L};[VP]QH{[QG]|[NA]}{I|L}T{I|L};[NP]{I|L}H{I|L}{[QG]|[NA]}T{I|L};[NP]{I|L}{I|L}H{[QG]|[NA]}T{I|L};[NP]{I|L}H{[QG]|[NA]}T{I|L}{I|L} 5.5412;5.0601;4.5759;4.5314;4.4049;4.0502;4.0272;3.7107;3.613;3.566 +;-;-;-;-;-;-;-;-;- + 630 1 2.074 77465.6 1.0 4015 4358 8372 SUDHL4_400M_050219_1,8375 SUDHL4_400M_050219_1,8375,GQHPNIITL True True GQHPNIITL 44.706621 496.780108630657 8492656.0 8372.0 nc|ENSG00000117676|Q15418-2|RPS6KA1;;ENST00000495332.1_1_X:83359500-83361456:-|nuORF;;nc|ENSG00000117676|Q15418-4|RPS6KA1;;ENSG00000117676|ENST00000374168|RPS6KA1;;nc|ENSG00000071242|Q15349-3|RPS6KA2;;nc|ENSG00000117676|Q15418-3|RPS6KA1;;ENSG00000072133|ENST00000262752|RPS6KA6;;nc|ENSG00000072133|Q9UK32-2|RPS6KA6;;ENSG00000177189|ENST00000379565|RPS6KA3;;ENSG00000071242|ENST00000265678|RPS6KA2;;nc|ENSG00000071242|Q15349-2|RPS6KA2 5.222360928853353 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8376 44.71 176.0 449800.0 25 0 38003.0 + 12199 GQSGLFTQY 9 122 500.74104541570233 999.4675378982048 2 500.7404357790947 MULTI CID FTMS 0 0 0 8372 203536.125 0.6473808837267969 -1 0.11627197265625 4 Unmodified _GQSGLFTQY_ ENSG00000066135|ENST00000372396|KDM4A;ENSG00000107077|ENST00000381309|KDM4C;ENSG00000127663|ENST00000159111|KDM4B;ENST00000480996.1_1_9:6805652-6819052:+|nuORF;ENST00000489243.5_1_9:6758133-6893415:+|nuORF;nc|ENSG00000127663|O94953-2|KDM4B;nc|ENSG00000127663|O94953|KDM4B;nc|ENSG00000293552|Q9H3R0-2|KDM4C;nc|ENSG00000293552|Q9H3R0-3|KDM4C;nc|ENSG00000293552|Q9H3R0-4|KDM4C 36.12702656103203 0.0967173616627612 5 [AG]T{[NV]|[RG]}{M(Oxidation (M))|F}TQY 9 3 [AG]T{[NV]|[RG]}{M(Oxidation (M))|F}T + + 19.949 8.1653 1.1828 1.9959 1.9959 52.922 0.0 0.0 0.0 0.0 6.140663754302649 0.0 0.0 0 0.0 0.0 0.0 0.5 [AG]T{[NV]|[RG]}{M(Oxidation (M))|F}TQY 1.9959 - 277 + 1 2.074 64417.8 1.0 4016 4358 8372 SUDHL4_400M_050219_1,8376 SUDHL4_400M_050219_1,8376,GQSGLFTQY True True GQSGLFTQY 44.710035 500.740435779095 2350192.0 8372.0 ENSG00000066135|ENST00000372396|KDM4A;;ENSG00000107077|ENST00000381309|KDM4C;;nc|ENSG00000293552|Q9H3R0-2|KDM4C;;nc|ENSG00000127663|O94953-2|KDM4B;;ENST00000489243.5_1_9:6758133-6893415:+|nuORF;;nc|ENSG00000127663|O94953|KDM4B;;nc|ENSG00000293552|Q9H3R0-4|KDM4C;;nc|ENSG00000293552|Q9H3R0-3|KDM4C;;ENST00000480996.1_1_9:6805652-6819052:+|nuORF;;ENSG00000127663|ENST00000159111|KDM4B 1.997225324312846 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8377 44.724 800.0 285330.0 25 0 32258.0 + -1 YVMGDHTIKNC 11 181 648.7906981037618 1295.5668432743234 2 648.7907592654228 MULTI CID FTMS 0 0 0 8372 120082.4453125 0.5759541966140208 -1 0.11627197265625 5 Oxidation (M) _YVM(Oxidation (M))GDHTIKNC_ REV__ENSG00000171757|ENST00000446859|LRRC34;REV__ENST00000522080.5_1_3:169513982-169530312:-|nuORF;REV__nc|ENSG00000171757|Q8IZ02-3|LRRC34 9.38312468134398 0.8308777417566128 5 [R{I|L}]MQGDE{I|L} 8 -1 48.088 0.0 0.0 3.7117 0.0 0.0 0.0 350.0839348824081 350.0839348824081 34.108798954734624 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.555462187404089 0.9947026752325154 [R{I|L}]MQGDE{I|L} 3.7117 - 795 1 2.074 172399.6 0.6000000238418579 4017 4358 8372 SUDHL4_400M_050219_1,8377 SUDHL4_400M_050219_1,8377,YVMGDHTIKNC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8378 44.729 266.0 435510.0 25 0 54693.0 + + -1 TLNDIMTRV 9 139 531.783916582327 1061.553280231454 2 531.7837402224541 MULTI CID FTMS 0 0 0 8372 109452.8359375 0.5319525489479272 -1 0.11627197265625 6 Carbamidomethyl (C) _TLRC(Carbamidomethyl (C))LAESI_ nc|ENSG00000170322|Q6P4R8-3|NFRKB;ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB 32.30548876998284 0.1201446275138228 5 [{I|L}T]ND{I|L}MTRV 9 -1 + 69.848 0.0 0.0 6.5798 6.5798 90.18 0.0 0.0 0.0 48.60159611812898 4.825233592612449 4.825233592612449 9.018637558036673 0 1.0994850021680094 2.0 0.0 0.6694451763165201 [{I|L}T]ND{I|L}MTRV;[{I|L}T]NVEMTRV;[{I|L}T]GGD{I|L}MTRV;[{I|L}T]VNEMTRV;[{I|L}T]GGVEMTRV;[{I|L}T]VGGEMTRV;[{I|L}T]NDVHHKV;[{I|L}T]V[DC][VG]TRV;[{I|L}T]NV[YN]PKN;[{I|L}T][WM][VG]TRV 6.5798;5.7303;5.7124;5.3745;4.8628;4.5071;3.5995;3.5717;3.5619;3.0766 -;-;-;-;-;-;-;-;-;- 933 + 1 2.074 90027.3 1.0 4018 4358 8372 SUDHL4_400M_050219_1,8378 SUDHL4_400M_050219_1,8378,TLRCLAESI False False TLNDIMTRV 44.728823 531.783740222454 1366666.125 8372.0 nc|ENSG00000170322|Q6P4R8-3|NFRKB;;ENSG00000170322|ENST00000682444|NFRKB;;nc|ENSG00000170322|Q6P4R8-2|NFRKB 6.014315128326416 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8380 44.736 145.0 899990.0 25 0 108860.0 + 40033 VGFSVRQRR 9 117 552.8229073465751 1103.63126175995 2 552.8234130740166 MULTI CID FTMS 0 0 0 8379 521753.84375 0.7173010483791419 -3 0.2505569458007812 1 Unmodified _VGFSVRQRR_ REV__ENSG00000188976|ENST00000327044|NOC2L;REV__ENST00000452600.1_1_2:130987586-130988813:+|nuORF;REV__ENST00000477976.5_1_1:880076-889593:-|nuORF;REV__ENST00000483767.5_1_1:880076-882054:-|nuORF 4.3292370932331545 0.7635526921153418 5 {M(Oxidation (M))|F} 1 -1 1.2591 0.0 0.0 0.11408 0.0 0.0 405.2575567812376 548.2730196588499 953.5305764400875 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.11408 + + 7 + 1 2.065 103903.1 1.0 4019 4359 8379 SUDHL4_400M_050219_1,8380 SUDHL4_400M_050219_1,8380,VGFSVRQRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8381 44.749 800.0 148970.0 25 0 28080.0 -1 0 88 1189.145027557175 3564.413253271724 3 1189.814257800579 MULTI CID FTMS 0 0 0 8379 186530.15625 1.0 0 0.0 2 5 E 1 -1 6.9897 0.0 0.0 0.1961 0.0 0.0 2908.184439460728 524.1627291315061 3432.347168592234 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.1961 - 29 + 1 2.065 93758.8 0.5199999809265137 4020 4359 8379 SUDHL4_400M_050219_1,8381 SUDHL4_400M_050219_1,8381, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8382 44.759 514.0 250830.0 25 0 72447.0 23186 LSRRRLPAAVP 11 100 618.3880973846733 1234.7616418361465 2 618.3880493044853 MULTI CID FTMS 0 0 0 8379 557860.9375 0.6072851011438217 -3 0.2505569458007812 3 Unmodified _LSRRRLPAAVP_ ENSG00000070047|ENST00000264555|PHRF1;ENST00000532550.1_1_11:601671-606691:+|nuORF;nc|ENSG00000070047|Q9P1Y6-2|PHRF1;nc|ENSG00000070047|Q9P1Y6-3|PHRF1 1.3295316138638542 0.8688751186870782 5 {I|L} 1 10 8.7724 0.0 0.0 0.71046 0.0 0.0 1103.6664250166136 0.0 1103.6664250166136 0.0 5.67349286948728 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.71046 + + 43 + 1 2.065 97987.6 1.0 4021 4359 8379 SUDHL4_400M_050219_1,8382 SUDHL4_400M_050219_1,8382,LSRRRLPAAVP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8383 44.772 759.0 201980.0 25 0 28866.0 + 40120 VGLGIRAVRDR 11 132 606.3699348683681 1210.725316803536 2 606.3697997927666 MULTI CID FTMS 0 0 0 8379 326223.34375 1.0 0 0.0 4 Unmodified _VGLGIRAVRDR_ REV__ENSG00000004139|ENST00000585482|SARM1;REV__nc|ENSG00000004139|Q6SZW1-2|SARM1 3.5964929083625545 0.858179447565866 5 Y 1 -1 10.485 0.0 0.0 0.86597 0.0 0.0 1029.650546761347 0.0 1029.650546761347 0.0 5.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.86597 - 56 + 1 2.065 112604.4 1.0 4022 4359 8379 SUDHL4_400M_050219_1,8383 SUDHL4_400M_050219_1,8383,VGLGIRAVRDR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8384 44.786 800.0 280820.0 25 0 32941.0 18874 LASVKALNHL 10 240 533.3228860172864 1064.6312191013726 2 533.3226806521416 MULTI CID FTMS 0 0 0 8379 194896.4375 0.441014816496213 3 -0.2529373168945312 5 Unmodified _LASVKALNHL_ ENST00000602584.1_1_X:72745151-72745637:-|nuORF 10.823927491677226 0.6659270209832991 5 [{I|L}A]G{[ET]|[MV]}{M(Oxidation (M))|F}TES 9 7 29.082 0.0 0.0 2.7317 0.0 0.0 0.0 126.1663502871726 126.1663502871726 12.02619615353547 0.0 0.0 0.0 0 0.0 2.0 0.6307196863200843 0.0 [{I|L}A]G{[ET]|[MV]}{M(Oxidation (M))|F}TES 2.7317 - 4507 1 2.065 172440.6 0.75 4023 4359 8379 SUDHL4_400M_050219_1,8384 SUDHL4_400M_050219_1,8384,LASVKALNHL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8385 44.795 552.0 518630.0 25 0 47387.0 + 16975 KIVDFSYSV 9 205 529.2818316919173 1056.5491104506343 2 529.2828246951103 MULTI CID FTMS 0 0 0 8379 148512.203125 0.1473790333709793 -1 0.0346183776855468 6 Unmodified _KIVDFSYSV_ ENSG00000156970|ENST00000287598|BUB1B;ENST00000453867.6_3_15:40509736-40545453:+|nuORF;nc|ENSG00000156970|O60566-2|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 72.96794272382148 0.0199516581995792 5 [K{I|L}]VD{M(Oxidation (M))|F}SYSV 9 0 + 88.591 0.0 0.0 8.3849 8.3849 95.719 0.0 0.0 0.0 10.963298386308765 16.478174818886373 10.963298386308765 10.0 0 1.1549471895720984 1.154901959985743 1.555462187404089 0.1344005005252609 + + [K{I|L}]VD{M(Oxidation (M))|F}SYSV;[K{I|L}]VDYAYSV;[DV]{I|L}K{M(Oxidation (M))|F}SYSV;[{I|L}V]KD{M(Oxidation (M))|F}SYSV;[K{I|L}]VS{M(Oxidation (M))|F}DYSV;[{I|L}V]DK{M(Oxidation (M))|F}SYSV;[DV]{I|L}KYAYSV;[{I|L}V]KDYAYSV;[VS][K{I|L}]{M(Oxidation (M))|F}DYSV;{NN|[MP]|[D{I|L}]|[EV]}VK{M(Oxidation (M))|F}SYSV 8.3849;7.4384;7.3473;7.3473;7.1727;6.4441;6.4008;6.4008;6.3093;6.1568 +;-;-;-;-;-;-;-;-;- + 4243 1 2.065 224819.3 1.0 4024 4359 8379 SUDHL4_400M_050219_1,8385 SUDHL4_400M_050219_1,8385,KIVDFSYSV True True KIVDFSYSV 44.795218 529.28282469511 5865911.0 8379.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENST00000453867.6_3_15:40509736-40545453:+|nuORF;;ENSG00000156970|ENST00000287598|BUB1B;;nc|ENSG00000156970|O60566-2|BUB1B 9.353790918986002 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8386 44.809 800.0 81106.0 25 0 2980.5 -1 0 105 921.1003538060256 0 921.4314453005792 PEAK CID FTMS 0 0 0 8379 33952.8046875 0.6984241595970507 1 -0.1093902587890625 7 5 TA{I|L}{I|L}C 5 -1 16.058 0.0 0.0 0.87262 0.0 0.0 936.7165024345136 399.1883944147094 1335.904896849223 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TA{I|L}{I|L}C 0.87262 - 1608 + 1 2.065 48977.7 0.5799999833106995 4025 4359 8379 SUDHL4_400M_050219_1,8386 SUDHL4_400M_050219_1,8386, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8387 44.824 800.0 109730.0 25 0 6615.2 22248 LPRKREAWTRR 11 120 734.9347519399666 0 735.0109741091728 PEAK CID FTMS 0 0 0 8379 26340.982421875 0.8414414918039118 1 -0.1093902587890625 8 Unmodified _LPRKREAWTRR_ ENST00000358303.8_1_7:129680937-129691088:-|nuORF;ENST00000484432.1_1_7:129683626-129691088:-|nuORF 0.3506318815782774 0.47618401536486 5 P 1 10 5.4846 0.0 0.0 0.37364 0.0 0.0 1242.7067861291534 125.07247339420157 1367.779259523355 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.37364 + + 68 + 1 2.065 63369.6 0.6600000262260437 4026 4359 8379 SUDHL4_400M_050219_1,8387 SUDHL4_400M_050219_1,8387,LPRKREAWTRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8388 44.838 800.0 48240.0 25 0 3140.9 -1 0 66 959.1136224825236 2874.319038047771 3 959.7753784060478 MULTI CID FTMS 0 0 0 8379 106899.125 0.0906717781992386 11 -1.053668975830078 9 5 [NP]{I|L}DY 5 -1 23.015 0.0 0.0 0.80072 0.0 0.0 0.0 2269.0272039015395 2269.0272039015395 15.568109453757655 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [NP]{I|L}DY 0.80072 - 54 1 2.065 35557.6 0.6299999952316284 4027 4359 8379 SUDHL4_400M_050219_1,8388 SUDHL4_400M_050219_1,8388, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8390 44.844 89.0 749820.0 25 0 76973.0 + 30774 RIALKHIMTA 10 94 577.3488851232386 1152.683217313277 2 577.3488647341728 MULTI CID FTMS 0 0 0 8389 486056.09375 0.2361077006553297 -2 0.1440086364746093 1 Unmodified _RIALKHIMTA_ REV__ENST00000446672.2_1_13:19955792-19968894:+|nuORF 1.6526216038709556 0.7189921496796233 5 V 1 -1 3.0989 0.0 0.0 0.26885 0.0 0.0 575.3781768853459 475.21836267642817 1050.596539561774 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.26885 - 35 + 1 2.077 55492.1 1.0 4028 4360 8389 SUDHL4_400M_050219_1,8390 SUDHL4_400M_050219_1,8390,RIALKHIMTA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8391 44.845 31.0 2094000.0 25 0 328640.0 13165 HFRKKRSE 8 79 544.3088754954598 1086.6031980577195 2 544.3093139529228 MULTI CID FTMS 0 0 0 8389 1766728.625 1.0 0 0.0 2 Unmodified _HFRKKRSE_ ENSG00000127362|ENST00000247879|TAS2R3 5.230669730166228 0.792582437072536 5 W 1 8 4.6041 0.0 0.0 0.42371 0.0 0.0 258.26397794228825 639.2399386041624 897.5039165464507 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.42371 - 10 + 1 2.077 53455.6 1.0 4029 4360 8389 SUDHL4_400M_050219_1,8391 SUDHL4_400M_050219_1,8391,HFRKKRSE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8392 44.846 36.0 1334100.0 25 0 300030.0 + 31802 RSSRLRKTF 9 67 575.8432377057429 1149.6719224782858 2 575.8433715701103 MULTI CID FTMS 0 0 0 8389 1574328.875 0.6438904432918096 -2 0.1440086364746093 3 Unmodified _RSSRLRKTF_ REV__ENST00000566445.5_1_16:75642811-75646269:-|nuORF 1.844237919475145 0.850302753031785 5 {M(Oxidation (M))|F} 1 -1 1.2591 0.0 0.0 0.10951 0.0 0.0 775.4766537788702 224.09810815982652 999.5747619386968 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.10951 + + 2 + 1 2.077 42163.6 1.0 4030 4360 8389 SUDHL4_400M_050219_1,8392 SUDHL4_400M_050219_1,8392,RSSRLRKTF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8393 44.848 87.0 1031500.0 25 0 83576.0 + 9611 FLLDKKIGV 9 113 516.8256841567213 1031.6368153802423 2 517.3251830935478 MULTI CID FTMS 0 0 0 8389 641736.5625 0.3406145813560765 3 -0.330963134765625 4 Unmodified _FLLDKKIGV_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 13.90604991867851 0.4602628045680013 5 {I|L}{I|L}YQ 4 7 21.146 0.0 0.0 2.0498 0.0 0.0 496.3489402649644 0.0 496.3489402649644 0.0 2.64645333192 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}YQ 2.0498 - 228 1 2.077 75518.5 1.0 4031 4360 8389 SUDHL4_400M_050219_1,8393 SUDHL4_400M_050219_1,8393,FLLDKKIGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8394 44.85 92.0 473340.0 25 0 100730.0 + -1 WQLTMKKKV 9 63 589.34291497251 1176.67127701182 2 589.3433105349541 MULTI CID FTMS 0 0 0 8389 494845.96875 0.4178730260700932 3 -0.330963134765625 5 Oxidation (M) _WQLTM(Oxidation (M))KKKV_ REV__ENST00000466094.5_1_7:107220736-107227893:+|nuORF;REV__ENST00000486326.5_1_7:107220736-107234551:+|nuORF 0.6014990680409731 0.8936861360942873 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.077 39654.7 1.0 4032 4360 8389 SUDHL4_400M_050219_1,8394 SUDHL4_400M_050219_1,8394,WQLTMKKKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8395 44.854 196.0 488180.0 25 0 51468.0 + 17097 KLFEFMHET 9 123 591.286746017643 1180.558939102086 2 591.2868530154228 MULTI CID FTMS 0 0 0 8389 313676.53125 0.7578013118619983 -2 0.1440086364746093 6 Unmodified _KLFEFMHET_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 67.83816525789305 0.0219346420158844 5 K{I|L}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}M 6 3 55.029 0.0 0.0 4.6612 0.0 0.0 0.0 382.13710524571326 382.13710524571326 -1.0421378748259968 0.0 -1.0421378748259968 0.0 0 1.7059771852360797 0.0 0.7614393726401688 0.0 + K{I|L}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}M 4.6612 + + 724 + 1 2.077 75302.2 1.0 4033 4360 8389 SUDHL4_400M_050219_1,8395 SUDHL4_400M_050219_1,8395,KLFEFMHET True True KLFEFMHET 44.854174 591.2872 3723044.3125 8389.0 ENSG00000082898|ENST00000401558|XPO1;;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 8.836560726165771 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8396 44.857 136.0 485920.0 25 0 61545.0 40161 VGPARRLS 8 102 428.26173283445326 854.5089127357065 2 428.2621948122978 MULTI CID FTMS 0 0 0 8389 274126.53125 0.0445564629022077 5 -0.5198326110839844 7 Unmodified _VGPARRLS_ ENST00000288014.6_1_14:24025414-24025621:+|nuORF 0.7936320650641473 0.8195151834710337 5 P 1 7 11.109 0.0 0.0 1.3001 0.0 0.0 739.4452205743769 0.0 739.4452205743769 0.0 11.10924374808178 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 1.3001 + + 7 + 1 2.077 57369.6 1.0 4034 4360 8389 SUDHL4_400M_050219_1,8396 SUDHL4_400M_050219_1,8396,VGPARRLS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8397 44.861 226.0 411970.0 25 0 56613.0 + 42494 VTKPLNVSW 9 116 522.295737143275 1042.57692135335 2 522.2963744997978 MULTI CID FTMS 0 0 0 8389 190434.1875 0.1987550295453479 -3 0.2602806091308594 8 Unmodified _VTKPLNVSW_ REV__ENST00000485406.1_1_X:69510136-69510301:+|nuORF 7.910154910731844 0.6385446671287552 5 {M(Oxidation (M))|F} 1 -1 10.379 0.0 0.0 0.99548 0.0 0.0 877.4975736744422 0.0 877.4975736744422 0.0 1.4528228099290796 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.99548 - 53 + 1 2.077 76126.0 1.0 4035 4360 8389 SUDHL4_400M_050219_1,8397 SUDHL4_400M_050219_1,8397,VTKPLNVSW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8398 44.867 332.0 217900.0 25 0 34780.0 + 41964 VQLISVLT 8 114 436.7749490625649 0 436.7748901247978 PEAK CID FTMS 0 0 0 8389 176802.3125 0.052755487035986 5 -0.5198326110839844 9 Unmodified _VQLISVLT_ REV__ENST00000480296.5_1_3:50385794-50386017:-|nuORF 0.6903765706972694 0.5983587967854751 5 AR 2 -1 8.2931 0.0 0.0 0.95155 0.0 0.0 436.2639656526704 205.0953310602172 641.3592967128876 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 AR 0.95155 - 8 + 1 2.077 64150.3 1.0 4036 4360 8389 SUDHL4_400M_050219_1,8398 SUDHL4_400M_050219_1,8398,VQLISVLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8399 44.87 157.0 489420.0 25 0 47291.0 + 1120 AGRLLLENY 9 123 524.7916564508329 1047.5687599684657 2 524.7927734255791 MULTI CID FTMS 0 0 0 8389 106417.265625 0.3217721070697589 -2 0.1440086364746093 10 Unmodified _AGRLLLENY_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 27.628801355627647 0.1796483985696185 5 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}{I|L}ENY 8 2 + 49.602 0.0 0.0 4.735 4.735 87.056 0.0 0.0 0.0 3.098943791441968 37.91956270212445 3.098943791441968 9.262137858390815 0 0.9247425010840048 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}{I|L}ENY;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}{I|L}EGGY 4.735;3.8508 -;- 142 1 2.077 63846.6 1.0 4037 4360 8389 SUDHL4_400M_050219_1,8399 SUDHL4_400M_050219_1,8399,AGRLLLENY False True AGRLLLENY 44.870322 524.792773425579 2268327.5 8389.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 4.474175691604614 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8400 44.879 511.0 195250.0 25 0 12262.0 + 2460 AQWDIGIAHA 10 127 541.2749771701531 1080.535401407106 2 541.2747680544853 MULTI CID FTMS 0 0 0 8389 127459.7578125 0.996009636505315 -2 0.1440086364746093 11 Unmodified _AQWDIGIAHA_ ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;nc|ENSG00000147548|Q9BZ95-3|NSD3;nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3 56.17704186161178 0.0466144807663799 5 [QA]WD{I|L}G{I|L}AHA 10 0 [QA] + + 53.11 16.923 8.5002 4.9152 4.9152 58.888 0.0 0.0 0.0 0.0 23.05321323145811 0.0 0.0 0 1.4489700043360187 0.0 0.3494850021680094 0.0 + + [QA]WD{I|L}G{I|L}AHA 4.9152 + + 1013 + 1 2.077 79230.4 1.0 4038 4360 8389 SUDHL4_400M_050219_1,8400 SUDHL4_400M_050219_1,8400,AQWDIGIAHA True True AQWDIGIAHA 44.87933 541.274768054485 1476454.25 8389.0 nc|ENSG00000147548|Q9BZ95-3|NSD3;;nc|ENSG00000147548|Q9BZ95-4|NSD3;;ENSG00000147548|ENST00000317025|NSD3;;nc|ENSG00000147548|Q9BZ95-5|NSD3;;nc|ENSG00000147548|Q9BZ95-2|NSD3 6.939602533976237 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8401 44.889 525.0 107210.0 25 0 7469.6 + 19057 LDPVLYRIS 9 100 538.3088941531171 1074.603235373034 2 538.3098022341728 MULTI CID FTMS 0 0 0 8389 103187.453125 0.1646844097657201 -4 0.3599472045898437 12 Unmodified _LDPVLYRIS_ REV__ENSG00000173614|ENST00000377205|NMNAT1 7.910154910731844 0.6385446671287552 5 {I|L} 1 -1 11.109 0.0 0.0 1.0338 0.0 0.0 943.5081406238138 0.0 943.5081406238138 0.0 -0.1498161168872158 -0.1498161168872158 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0338 + + 44 + 1 2.077 51093.5 1.0 4039 4360 8389 SUDHL4_400M_050219_1,8401 SUDHL4_400M_050219_1,8401,LDPVLYRIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8402 44.896 405.0 215600.0 25 0 25168.0 + 23721 LTVDSHLSL 9 126 492.7727914960644 983.5310300589288 2 492.7718383669853 MULTI CID FTMS 0 0 0 8389 98134.359375 1.0 0 0.0 13 Unmodified _LTVDSHLSL_ ENST00000404488.7_1_22:50319154-50321136:+|nuORF 54.773552608820026 0.0299037012502309 5 [{I|L}T]V{M(Oxidation (M))|F}VSRY 8 6 + 42.183 0.0 0.0 4.2889 4.2889 77.798 0.0 0.0 0.0 14.28157479901376 2.047364760695736 2.047364760695736 2.047364760695736 0 0.4247425010840047 2.0 0.5 0.0 [{I|L}T]V{M(Oxidation (M))|F}VSRY;[{I|L}T]VDSH{I|L}S{I|L};[{I|L}T]VDSH{I|L}TV;[{I|L}T]VD[YK]{M(Oxidation (M))|F}V;[{I|L}T]V[H{I|L}]{[C(Carbamidomethyl (C))E]|[WC]}{I|L};{[TV]|[{I|L}S]}HSV{M(Oxidation (M))|F}V[VP];[{I|L}T][WD]H{I|L}S{I|L};[VP]V{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DV[VP];[H{I|L}]SSV{M(Oxidation (M))|F}V[VP];[HS]{I|L}SV{M(Oxidation (M))|F}V[VP] 4.2889;4.0807;3.5206;3.2138;2.6586;2.6289;2.2835;2.1657;1.839;1.728 -;+;-;-;-;-;-;-;-;- + 444 + 1 2.077 69592.7 1.0 4040 4360 8389 SUDHL4_400M_050219_1,8402 SUDHL4_400M_050219_1,8402,LTVDSHLSL True True LTVDSHLSL 44.895811 492.771838366985 478664.28125 8389.0 ENST00000404488.7_1_22:50319154-50321136:+|nuORF 4.544018904368083 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8403 44.908 685.0 291320.0 25 0 49000.0 + 23785 LVDASGEFTE 10 185 534.2483400770317 1066.4821272208633 2 534.2494994997978 MULTI CID FTMS 0 0 0 8389 95731.4296875 0.1366905104908453 -3 0.2602806091308594 14 Unmodified _LVDASGEFTE_ REV__ENSG00000038427|ENST00000265077|VCAN;REV__ENST00000513016.5_1_5:82832752-82876250:+|nuORF;REV__nc|ENSG00000038427|P13611-2|VCAN;REV__nc|ENSG00000038427|P13611-5|VCAN 29.081581746732265 0.3152867722954398 5 {I|L}VDE[HT]DE 8 -1 59.914 0.0 0.0 5.6179 0.0 0.0 0.0 125.07247339420157 125.07247339420157 11.023298645589406 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.805462187404089 0.0 {I|L}VDE[HT]DE 5.6179 - 2886 + 1 2.077 154420.0 1.0 4041 4360 8389 SUDHL4_400M_050219_1,8403 SUDHL4_400M_050219_1,8403,LVDASGEFTE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8404 44.919 578.0 281630.0 25 0 23170.0 + 3018 AVLCRGKLP 9 165 478.7871426969385 955.559732460677 2 479.7939636111259 MULTI CID FTMS 0 0 0 8389 86046.9765625 0.5280941032470221 -2 0.1440086364746093 15 Unmodified _AVLCRGKLP_ REV__ENSG00000186532|ENST00000305513|SMYD4 13.50788311687929 0.4710407108020397 5 {[VA]|[{I|L}G]}HHVA{I|L}P{I|L} 9 -1 + 30.931 0.0 0.0 3.237 3.237 80.834 0.0 0.0 0.0 0.422840625283932 15.780833760633628 0.422840625283932 8.653014261025437 0 0.5579021467263782 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}HHVA{I|L}P{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}P{[TV]|[{I|L}S]}{I|L}P{I|L};[KG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VA{I|L}P{I|L};[KG]T{[SA]|[TG]}VA{I|L}P{I|L};{[VA]|[{I|L}G]}[VG][C(Carbamidomethyl (C))K]{I|L}P{I|L};[{I|L}V]N[C(Carbamidomethyl (C))K]{I|L}P{I|L};[KG]TQ{[TV]|[{I|L}S]}{I|L}P{I|L};[{I|L}V]{[DS]|[MA]|[CV]|TT}{[TV]|[{I|L}S]}{I|L}P{I|L};[{I|L}A]{[ET]|[MV]}{[TV]|[{I|L}S]}{I|L}P{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KG][PG]{I|L}P{I|L} 3.237;2.3314;1.3955;1.2647;0.99922;0.87049;0.7654;0.676;0.28759;0.22819 -;-;-;-;-;-;-;-;-;- 315 1 2.077 127331.3 1.0 4042 4360 8389 SUDHL4_400M_050219_1,8404 SUDHL4_400M_050219_1,8404,AVLCRGKLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8405 44.933 800.0 157360.0 25 0 16510.0 -1 0 148 679.3664434213972 678.3591669547972 1 681.3726074099541 MULTI CID FTMS 0 0 0 8389 234365.59375 0.1717669056108926 3 -0.330963134765625 16 5 AYAPQ 5 -1 22.49 0.0 0.0 3.3154 0.0 0.0 130.0909917612409 0.0 130.0909917612409 0.0 -1.0218039747101528 -1.0218039747101528 0.0 0 0.0 0.0 0.0 0.1344005005252609 AYAPQ 3.3154 - 425 + 1 2.077 93061.4 0.7699999809265137 4043 4360 8389 SUDHL4_400M_050219_1,8405 SUDHL4_400M_050219_1,8405, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8406 44.937 236.0 281870.0 25 0 45140.0 + 27346 PHSSPLALL 9 109 467.7715667304769 933.5285805277538 2 467.7715331912041 MULTI CID FTMS 0 0 0 8389 211427.0625 0.0123750095258987 8 -0.7322807312011719 17 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 24.67388899826682 0.2172451872415813 5 {I|L}{I|L} 2 7 21.454 0.0 0.0 2.2981 0.0 0.0 689.3493182980648 0.0 689.3493182980648 0.0 8.583201562420452 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 2.2981 + + 304 + 1 2.077 57484.4 1.0 4044 4360 8389 SUDHL4_400M_050219_1,8406 SUDHL4_400M_050219_1,8406,PHSSPLALL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8407 44.94 83.0 455530.0 25 0 91718.0 + 27350 PHSTFTPVL 9 67 499.7676621556043 997.5207713780086 2 499.7692748904228 MULTI CID FTMS 0 0 0 8389 167963.71875 0.3369449903116794 -2 0.1440086364746093 18 Unmodified _PHSTFTPVL_ REV__ENST00000261797.6_1_5:149933402-149933609:+|nuORF 18.13498045792455 0.3457906370836843 5 {I|L}{I|L} 2 -1 22.959 0.0 0.0 2.3016 0.0 0.0 753.3420584647258 0.0 753.3420584647258 0.0 8.034641205656566 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}{I|L} 2.3016 - 74 + 1 2.077 36668.0 1.0 4045 4360 8389 SUDHL4_400M_050219_1,8407 SUDHL4_400M_050219_1,8407,PHSTFTPVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8409 44.945 16.0 2431200.0 25 0 516800.0 + -1 KLKKLHGMY 9 64 567.3297886536056 1132.6450243740112 2 567.3302490115166 MULTI CID FTMS 0 0 0 8408 3096043.25 1.0 0 0.0 1 Oxidation (M) _KLKKLHGM(Oxidation (M))Y_ REV__ENST00000471188.5_1_7:92887474-92887687:+|nuORF 0.6014990680409731 0.8936861360942873 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.098 37208.2 1.0 4046 4361 8408 SUDHL4_400M_050219_1,8409 SUDHL4_400M_050219_1,8409,KLKKLHGMY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8410 44.946 36.0 553940.0 25 0 50731.0 42106 VRLEYRQR 8 45 560.3219541867511 1118.629355440302 2 560.3225585818291 MULTI CID FTMS 0 0 0 8408 1132391.125 0.7622939715093424 1 -0.04150390625 2 Unmodified _VRLEYRQR_ ENSG00000100823|ENST00000216714|APEX1;ENST00000557159.5_1_14:20924026-20925664:+|nuORF 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.098 22590.8 1.0 4047 4361 8408 SUDHL4_400M_050219_1,8410 SUDHL4_400M_050219_1,8410,VRLEYRQR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8411 44.948 94.0 430430.0 25 0 68653.0 + 23377 LTDPDIHVL 9 67 511.77992544400064 1021.5452979548012 2 511.7797119021416 MULTI CID FTMS 0 0 0 8408 405653.34375 0.1803881654287919 2 -0.2289199829101562 3 Unmodified _LTDPDIHVL_ ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7 28.486842064014134 0.1687311288560894 5 {I|L}TD 3 6 50.445 0.0 0.0 4.9381 0.0 0.0 0.0 689.3625794522216 689.3625794522216 29.230530548736056 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}TD 4.9381 + + 213 + 1 2.098 38167.0 1.0 4048 4361 8408 SUDHL4_400M_050219_1,8411 SUDHL4_400M_050219_1,8411,LTDPDIHVL False True LTDPDIHVL 44.948282 511.779711902142 43775127.0 8408.0 ENSG00000091157|ENST00000254442|WDR7;;nc|ENSG00000091157|Q9Y4E6-2|WDR7 6.954903920491536 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8412 44.95 91.0 385630.0 25 0 83386.0 + 1417 ALDKATVLL 9 63 472.2948828547759 942.5752127763518 2 472.2957946658134 MULTI CID FTMS 0 0 0 8408 338832.5 0.1738560778562441 2 -0.2289199829101562 4 Unmodified _ALDKATVLL_ ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4 39.94969957227396 0.0757326808254658 5 [{I|L}A][KS]D{I|L}A{I|L}{I|L} 9 4 + 45.797 0.0 0.0 4.8588 4.8588 81.248 0.0 0.0 0.0 15.787720800958596 30.31288733222432 15.787720800958596 3.5121967796476383 0 1.3182503180159344 1.5228787452803376 0.805462187404089 0.0 [{I|L}A][KS]D{I|L}A{I|L}{I|L};[{I|L}A]{[WT]|[RM]}RA{I|L}{I|L};[{I|L}A][KS]{[CP]|[EA]}V{I|L}{I|L} 4.8588;4.4861;4.4603 -;-;- 86 1 2.098 31603.0 1.0 4049 4361 8408 SUDHL4_400M_050219_1,8412 SUDHL4_400M_050219_1,8412,ALDKATVLL True True ALDKATVLL 44.950284 472.295794665813 25841780.0 8408.0 ENST00000489049.5_1_10:112647518-112650449:+|nuORF;;nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 3.929819345474243 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8413 44.953 134.0 498670.0 25 0 97046.0 45463 YTGLKSAGRRL 11 69 611.3548497529347 1220.6951465726693 2 611.3555175662041 MULTI CID FTMS 0 0 0 8408 302064.34375 0.2803258778589382 -4 0.3623237609863281 5 Unmodified _YTGLKSAGRRL_ ENSG00000058866|ENST00000265022|DGKG;ENSG00000136267|ENST00000402815|DGKB;ENST00000480809.5_1_3:185879373-185906153:-|nuORF;nc|ENSG00000058866|P49619-2|DGKG;nc|ENSG00000058866|P49619-3|DGKG;nc|ENSG00000136267|Q9Y6T7-2|DGKB;nc|ENSG00000136267|Q9Y6T7|DGKB 2.9952420565917617 0.861016188266951 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.098 54541.4 1.0 4050 4361 8408 SUDHL4_400M_050219_1,8413 SUDHL4_400M_050219_1,8413,YTGLKSAGRRL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8414 44.955 88.0 424770.0 25 0 60040.0 + 14916 ILLPRTVSL 9 78 506.3318913768848 0 506.3318054080009 PEAK CID FTMS 0 0 0 8408 275536.96875 0.5907859407255065 1 -0.04150390625 6 Unmodified _ILLPRTVSL_ ENSG00000101825|ENST00000217939|MXRA5 20.453626601364224 0.1969592619112565 5 {I|L} 1 8 11.237 0.0 0.0 1.1119 0.0 0.0 226.16839598547227 668.3761080377561 894.5445040232285 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L} 1.1119 + + 62 + 1 2.098 34871.1 1.0 4051 4361 8408 SUDHL4_400M_050219_1,8414 SUDHL4_400M_050219_1,8414,ILLPRTVSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8415 44.957 105.0 1287100.0 25 0 247280.0 13158 HFPLLWKVK 9 108 584.3568851986632 1166.6992174641264 2 584.3573486208916 MULTI CID FTMS 0 0 0 8408 246755.328125 0.1284053765825913 -1 0.1020431518554687 7 Unmodified _HFPLLWKVK_ nc|ENSG00000138639|Q8N264-5|ARHGAP24 0.6014990680409731 0.8936861360942873 5 K 1 8 3.0989 0.0 0.0 0.26562 0.0 0.0 752.4535032080702 283.11907675353257 1035.5725799616027 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.26562 + + 14 + 1 2.098 103905.5 1.0 4052 4361 8408 SUDHL4_400M_050219_1,8415 SUDHL4_400M_050219_1,8415,HFPLLWKVK False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 8416 44.971 800.0 101250.0 25 0 17456.0 -1 0 96 841.9433847912771 1681.8722166493542 2 842.4452392458916 MULTI CID FTMS 0 0 0 8408 93950.2109375 0.6319607703412967 -1 0.1020431518554687 8 5 [PS]SG{I|L}K[QT]RD{I|L}G[VP]{NN|[MP]|[D{I|L}]|[EV]} 16 -1 + 64.479 0.0 0.0 3.8337 3.8337 75.114 0.0 0.0 0.0 0.9691001300805696 13.723637474483477 0.9691001300805696 0.9691001300805696 0 0.5 0.958607314841775 0.9559771852360796 0.7302046884880937 [PS]SG{I|L}K[QT]RD{I|L}G[VP]{NN|[MP]|[D{I|L}]|[EV]};[VG]DG{I|L}K[QT]RD{I|L}G[VP]{NN|[MP]|[D{I|L}]|[EV]};[PS]SG{I|L}K[QT]RMPG[VP]{NN|[MP]|[D{I|L}]|[EV]};[VG]DG{I|L}K[QT]RMPG[VP]{NN|[MP]|[D{I|L}]|[EV]};[PS]SG{I|L}K[QT]RD{I|L}[RP]{NN|[MP]|[D{I|L}]|[EV]};[VG]DG{I|L}K[QT]RD{I|L}[RP]{NN|[MP]|[D{I|L}]|[EV]};[PS]SG{I|L}K[QT]RMP[RP]{NN|[MP]|[D{I|L}]|[EV]};[VG]DG{I|L}K[QT]RMP[RP]{NN|[MP]|[D{I|L}]|[EV]};[PS]SG{I|L}K[QT]RD{I|L}G[QA][QP];[VG]DG{I|L}K[QT]RD{I|L}G[QA][QP] 3.8337;3.7761;3.6548;3.5971;3.4348;3.3772;3.2558;3.1982;2.9131;2.8554 -;-;-;-;-;-;-;-;-;- 1914 1 2.098 60653.4 0.6299999952316284 4053 4361 8408 SUDHL4_400M_050219_1,8416 SUDHL4_400M_050219_1,8416, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8417 44.975 179.0 299800.0 25 0 24470.0 + -1 KLLDEAIQAV 10 90 550.3218173163071 549.3145408497071 1 550.3217651247978 MULTI CID FTMS 0 0 0 8408 86586.6171875 0.3818038002046697 -1 0.1020431518554687 9 ENST00000563984.1_1_16:46717374-46723045:-|nuORF;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENSG00000069329|ENST00000299138|VPS35;ENST00000569950.1_1_16:46715399-46723351:-|nuORF 5 AV 2 -1 14.949 0.0 0.0 2.7213 0.0 0.0 361.19829741884615 0.0 361.19829741884615 0.0 3.1657635992318767 0.0 0.0 0 0.0 0.0 0.0 0.0 AV 2.7213 - 44 + 1 2.098 47224.3 1.0 4054 4361 8408 SUDHL4_400M_050219_1,8417 SUDHL4_400M_050219_1,8417, False False KLLDEAIQAV 44.974559 550.321765124798 2092311.625 8408.0 ENST00000563984.1_1_16:46717374-46723045:-|nuORF;;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35;;ENST00000569950.1_1_16:46715399-46723351:-|nuORF 5.170665582021077 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8418 44.982 403.0 223280.0 25 0 15668.0 + 17098 KLFEFMHET 9 141 394.52644388927854 1180.5575022680357 3 394.5264465212822 MULTI CID FTMS 0 0 0 8408 81656.078125 1.0 0 0.0 10 Unmodified _KLFEFMHET_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 29.081581746732265 0.1611639662936252 5 [HM][{M(Oxidation (M))|F}T]{M(Oxidation (M))|F} 5 7 24.436 0.0 0.0 2.0698 0.0 0.0 0.0 514.2643863835232 514.2643863835232 11.988474775526187 0.0 0.0 0.0 0 0.4247425010840047 1.0457574905606752 0.3252574989159953 0.0 [HM][{M(Oxidation (M))|F}T]{M(Oxidation (M))|F} 2.0698 - 156 1 2.098 74327.8 1.0 4055 4361 8408 SUDHL4_400M_050219_1,8418 SUDHL4_400M_050219_1,8418,KLFEFMHET False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8420 44.993 520.0 223450.0 25 0 29382.0 -1 LSMWLLTL 8 125 496.7799396998256 991.5453264664512 2 496.7799560427666 MULTI CID FTMS 0 0 0 8419 251569.09375 0.3596885812994184 3 -0.3762855529785156 1 Oxidation (M) _LSM(Oxidation (M))WLLTL_ ENST00000493032.5_1_1:46714192-46726402:+|nuORF 40.44857923139169 0.2267865117615937 5 [{I|L}T]G{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}T{I|L} 9 -1 + 39.134 0.0 0.0 3.9467 3.9467 85.093 0.0 0.0 0.0 13.120149727660298 9.666056938316965 9.666056938316965 10.01348757971677 0 0.8182503180159344 1.3979400086720375 0.8609243748081782 0.0 [{I|L}T]G{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}T{I|L};[{I|L}T]G{[{M(Oxidation (M))|F}D]|MM}{I|L}T{I|L}{I|L};[{I|L}T]G{[{M(Oxidation (M))|F}D]|MM}T{I|L}{I|L}{I|L};[NP]{I|L}H{[QG]|[NA]}{I|L}T{I|L};[H{I|L}]{I|L}H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}T{I|L};[{I|L}T]G[R{M(Oxidation (M))|F}]{[QG]|[NA]}T{I|L};[VP]{M(Oxidation (M))|F}[CS]{I|L}{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG]QQ{I|L}T{I|L};[VP]QH{[QG]|[NA]}{I|L}T{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VG]A{[QG]|[NA]}{I|L}T{I|L} 3.9467;2.9368;1.7996;1.7765;1.7589;1.7521;1.7205;1.4182;1.2953;1.2247 -;-;-;-;-;-;-;-;-;- 708 1 2.098 91604.8 1.0 4056 4362 8419 SUDHL4_400M_050219_1,8420 SUDHL4_400M_050219_1,8420,LSMWLLTL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8421 45.0 369.0 287980.0 25 0 61309.0 30753 RHLTKRLPTK 10 69 625.3958501837992 1248.7771474343983 2 625.3960449099541 MULTI CID FTMS 0 0 0 8419 855953.0 1.0 0 0.0 2 Unmodified _RHLTKRLPTK_ ENSG00000058673|ENST00000367210|ZC3H11A 1.4819007175156935 0.719781833666733 5 D 1 10 5.4846 0.0 0.0 0.43919 0.0 0.0 527.4099732174046 603.312199637273 1130.7221728546776 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.43919 - 3 + 1 2.098 81356.1 1.0 4057 4362 8419 SUDHL4_400M_050219_1,8421 SUDHL4_400M_050219_1,8421,RHLTKRLPTK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8422 45.003 124.0 511030.0 25 0 91288.0 42469 VTGLVHKW 8 92 470.2736308279416 938.5327087226832 2 470.2726928591728 MULTI CID FTMS 0 0 0 8419 430862.46875 1.0 0 0.0 3 Unmodified _VTGLVHKW_ ENSG00000176715|ENST00000614302|ACSF3 4.75600775471527 0.7954636275367004 5 V 1 7 11.237 0.0 0.0 1.1973 0.0 0.0 469.2468943689708 367.1981905572876 836.4450849262583 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + V 1.1973 + + 1 + 1 2.098 52674.8 1.0 4058 4362 8419 SUDHL4_400M_050219_1,8422 SUDHL4_400M_050219_1,8422,VTGLVHKW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8423 45.016 751.0 164090.0 25 0 10652.0 + 20370 LLGPPPVGV 9 162 424.765143932117 847.515734931034 2 424.7655517458916 MULTI CID FTMS 0 0 0 8419 383795.875 1.0 0 0.0 4 Unmodified _LLGPPPVGV_ ENSG00000148337|ENST00000372938|CIZ1;ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-2|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-5|CIZ1 67.41302359171755 0.0220989861905124 5 {I|L}{I|L}GPPPV[VG] 9 0 + 49.35 0.0 0.0 5.8229 5.8229 91.561 0.0 0.0 0.0 8.362424760180431 34.568715476696354 8.362424760180431 14.490925311194182 0 1.2059771852360797 1.6989700043360187 0.0 0.0 + + {I|L}{I|L}GPPPV[VG];[VP][{I|L}A]PPV[VG];[VP]P[{I|L}A]PV[VG];[{I|L}P]{[VA]|[{I|L}G]}PPV[VG];{I|L}{I|L}GP[RH]R;[PG]{I|L}{I|L}PPV[VG];[PG]P{I|L}{I|L}PV[VG];[VP]PPG{I|L}{I|L}[VG];{I|L}{I|L}G[YK]V[VG];[VP]PGP{I|L}{I|L}[VG] 5.8229;4.1131;4.0845;4.0591;3.853;3.7485;3.5121;3.1536;3.0787;2.9458 +;-;-;-;-;-;-;-;-;- + 281 1 2.098 98277.4 1.0 4059 4362 8419 SUDHL4_400M_050219_1,8423 SUDHL4_400M_050219_1,8423,LLGPPPVGV True True LLGPPPVGV 45.015652 424.765551745892 5596103.0 8419.0 ENST00000476727.6_1_9:130931703-130953136:-|nuORF;;nc|ENSG00000148337|Q9ULV3-2|CIZ1;;nc|ENSG00000148337|Q9ULV3-3|CIZ1;;ENSG00000148337|ENST00000372938|CIZ1;;nc|ENSG00000148337|Q9ULV3-4|CIZ1;;nc|ENSG00000148337|Q9ULV3-5|CIZ1 6.862663586934407 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8424 45.029 779.0 181700.0 25 0 18329.0 + 23775 LVASVTALSI 10 179 487.30012437302486 972.5856958128496 2 487.2993041872978 MULTI CID FTMS 0 0 0 8419 357252.8125 0.090536056666889 9 -0.8759689331054688 5 Unmodified _LVASVTALSI_ REV__ENSG00000104299|ENST00000521022|INTS9;REV__ENST00000520316.5_1_8:28627126-28633440:-|nuORF;REV__ENST00000523303.5_1_8:28625665-28628621:-|nuORF;REV__nc|ENSG00000104299|Q9NV88-2|INTS9;REV__nc|ENSG00000104299|Q9NV88-3|INTS9 10.073929032068715 0.6785112666868882 5 {I|L} 1 -1 11.99 0.0 0.0 1.2328 0.0 0.0 841.4906468399967 0.0 841.4906468399967 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2328 + + 121 + 1 2.098 109384.5 1.0 4060 4362 8419 SUDHL4_400M_050219_1,8424 SUDHL4_400M_050219_1,8424,LVASVTALSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8425 45.043 800.0 128480.0 25 0 17589.0 -1 LAYKSPELLP 10 130 586.8338140243333 1171.6530751154664 2 586.8347045779228 MULTI CID FTMS 0 0 0 8419 160605.25 1.0 0 0.0 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LAYKSPELLP_ ENST00000533737.5_1_11:9161780-9163597:-|nuORF 3.5964929083625545 0.7100006075494749 5 Y 1 -1 10.837 0.0 0.0 0.92497 0.0 0.0 990.5785186963244 0.0 990.5785186963244 0.0 1.629267896945068 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.92497 + + 145 + 1 2.098 78767.0 0.6600000262260437 4061 4362 8419 SUDHL4_400M_050219_1,8425 SUDHL4_400M_050219_1,8425,LAYKSPELLP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8426 45.057 800.0 134170.0 25 0 9197.0 + 19980 LIKGTTASI 9 130 452.2776178015605 902.540682669921 2 452.7790710330009 MULTI CID FTMS 0 0 0 8419 153344.890625 1.0 0 0.0 7 Unmodified _LIKGTTASI_ REV__ENSG00000115827|ENST00000375255|DCAF17;REV__ENST00000468592.5_1_2:172300063-172325523:+|nuORF;REV__ENST00000480855.1_1_2:172299988-172306494:+|nuORF 18.13498045792455 0.3457906370836843 5 [KA]YPS{I|L} 6 -1 22.522 0.0 0.0 2.4954 0.0 0.0 0.0 240.1526098046144 240.1526098046144 4.566850609564909 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.2059771852360797 [KA]YPS{I|L} 2.4954 - 274 1 2.098 86102.8 0.550000011920929 4062 4362 8419 SUDHL4_400M_050219_1,8426 SUDHL4_400M_050219_1,8426,LIKGTTASI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8427 45.072 800.0 142320.0 25 0 14826.0 -1 EIRMLKKVVSV 11 116 659.3986434737337 0 659.4277221560478 PEAK CID FTMS 0 0 0 -1 0 8 Oxidation (M) _EIRM(Oxidation (M))LKKVVSV_ ENSG00000123454|ENST00000393056|DBH 5.296884461304476 0.47618401536486 5 M 1 -1 4.6041 0.0 0.0 0.34965 0.0 0.0 694.453401173926 488.2659137883234 1182.7193149622494 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.34965 + + 40 + 1 2.098 89286.0 0.6000000238418579 4063 4362 8419 SUDHL4_400M_050219_1,8427 SUDHL4_400M_050219_1,8427,EIRMLKKVVSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8428 45.086 800.0 72584.0 25 0 13265.0 + 42554 VTPKHIKKPRK 11 104 666.4348632693291 0 666.4348632693291 PEAK CID FTMS 0 0 0 -1 0 9 Unmodified _VTPKHIKKPRK_ REV__ENSG00000165572|ENST00000379485|KBTBD6 0.3070304955306653 0.4761840153648598 5 W 1 -1 2.4743 0.0 0.0 0.18591 0.0 0.0 682.5467886701186 459.22214685611567 1141.7689355262344 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.18591 - 4 + 1 2.098 48215.5 0.5600000023841858 4064 4362 8419 SUDHL4_400M_050219_1,8428 SUDHL4_400M_050219_1,8428,VTPKHIKKPRK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8429 45.101 800.0 84780.0 25 0 5834.9 + 37404 TLAPPIHLRYL 11 120 647.3897546923905 0 647.4092895388603 PEAK CID FTMS 0 0 0 -1 0 10 Unmodified _TLAPPIHLRYL_ REV__ENSG00000204634|ENST00000409318|TBC1D8;REV__ENST00000494011.1_1_2:101627772-101638797:-|nuORF;REV__nc|ENSG00000204634|O95759-2|TBC1D8;REV__nc|ENSG00000204634|O95759|TBC1D8 8.745405648335112 0.4618489994582195 5 {I|L}TD 3 -1 16.198 0.0 0.0 1.253 0.0 0.0 184.28615120927776 776.2918963565447 960.5780475658224 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}TD 1.253 - 25 + 1 2.098 58701.4 0.5400000214576721 4065 4362 8419 SUDHL4_400M_050219_1,8429 SUDHL4_400M_050219_1,8429,TLAPPIHLRYL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8430 45.113 723.0 186620.0 25 0 18208.0 + 23046 LSKTSLAPI 9 157 465.2868818841307 0 465.2863952517509 PEAK CID FTMS 0 0 0 8419 111647.6484375 1.0 0 0.0 11 Unmodified _LSKTSLAPI_ ENSG00000067191|ENST00000394303|CACNB1;ENSG00000165995|ENST00000324631|CACNB2;nc|ENSG00000067191|Q02641-2|CACNB1;nc|ENSG00000067191|Q02641-3|CACNB1;nc|ENSG00000165995|Q08289-10|CACNB2;nc|ENSG00000165995|Q08289-2|CACNB2;nc|ENSG00000165995|Q08289-3|CACNB2;nc|ENSG00000165995|Q08289-4|CACNB2;nc|ENSG00000165995|Q08289-5|CACNB2;nc|ENSG00000165995|Q08289-6|CACNB2;nc|ENSG00000165995|Q08289-7|CACNB2;nc|ENSG00000165995|Q08289-8|CACNB2;nc|ENSG00000165995|Q08289-9|CACNB2 30.63653989081413 0.1077493867305487 5 VD 2 9 10.701 0.0 0.0 1.1524 0.0 0.0 629.3743395177258 82.06698785953358 711.4413273772594 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 VD 1.1524 - 137 + 1 2.098 106004.6 1.0 4066 4362 8419 SUDHL4_400M_050219_1,8430 SUDHL4_400M_050219_1,8430,LSKTSLAPI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8431 45.127 800.0 214440.0 25 0 20617.0 + 20695 LLRPSPRLS 9 185 519.8251286242247 0 519.8251830935478 PEAK CID FTMS 0 0 0 8419 104476.1875 1.0 0 0.0 12 Unmodified _LLRPSPRLS_ REV__ENSG00000109519|ENST00000264954|GRPEL1;REV__ENST00000504920.5_1_4:7064088-7069780:-|nuORF 8.593279151180031 0.3284076903191179 5 {I|L} 1 -1 5.4846 0.0 0.0 0.52856 0.0 0.0 349.29111310606805 572.2367360117879 921.527849117856 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.52856 + + 127 + 1 2.098 130419.9 0.5299999713897705 4067 4362 8419 SUDHL4_400M_050219_1,8431 SUDHL4_400M_050219_1,8431,LLRPSPRLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8432 45.142 800.0 99792.0 25 0 18184.0 + 19590 LFYTIKKRRL 10 97 669.4219848513603 0 669.4219848513603 PEAK CID FTMS 0 0 0 -1 0 13 Unmodified _LFYTIKKRRL_ REV__ENST00000327892.12_1_6:30688208-30688256:+|nuORF 4.3292370932331545 0.3961065659209837 5 N 1 -1 3.4949 0.0 0.0 0.26143 0.0 0.0 962.633976194482 257.12986169986567 1219.7638378943475 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.26143 - 18 + 1 2.098 65253.2 0.5600000023841858 4068 4362 8419 SUDHL4_400M_050219_1,8432 SUDHL4_400M_050219_1,8432,LFYTIKKRRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8433 45.155 754.0 197820.0 25 0 31357.0 + 31745 RRVWRFFK 8 145 597.8564939889404 1193.6984350446808 2 597.8566772341728 MULTI CID FTMS 0 0 0 8419 359728.84375 0.5773597758797481 5 -0.4609527587890625 14 Unmodified _RRVWRFFK_ REV__ENSG00000185955|ENST00000332375|SPACDR 5.230669730166228 0.792582437072536 5 Q 1 -1 8.4949 0.0 0.0 0.71164 0.0 0.0 1047.6287919556166 0.0 1047.6287919556166 0.0 0.4671084258111779 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.71164 - 51 + 1 2.098 112976.4 1.0 4069 4362 8419 SUDHL4_400M_050219_1,8433 SUDHL4_400M_050219_1,8433,RRVWRFFK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8434 45.169 800.0 142310.0 25 0 9829.5 -1 0 122 864.447845745089 0 864.4482910037041 PEAK CID FTMS 0 0 0 8419 208349.15625 1.0 0 0.0 15 5 {I|L}N{M(Oxidation (M))|F}A[NP]YSR 9 -1 45.486 0.0 0.0 2.634 0.0 0.0 437.2402216642029 224.10422693424064 661.3444485984436 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 2.1549471895720984 0.3807196863200844 {I|L}N{M(Oxidation (M))|F}A[NP]YSR 2.634 - 11539 + 1 2.098 77977.8 0.7300000190734863 4070 4362 8419 SUDHL4_400M_050219_1,8434 SUDHL4_400M_050219_1,8434, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8436 45.175 79.0 540830.0 25 0 100750.0 + 9421 FKVWKKAML 9 70 575.8432377057429 1149.6719224782858 2 575.8435546755791 MULTI CID FTMS 0 0 0 8435 903226.4375 0.3694138375215642 1 -0.1138916015625 1 Unmodified _FKVWKKAML_ REV__ENSG00000149488|ENST00000358864|TMC2;REV__nc|ENSG00000149488|Q8TDI7-3|TMC2 2.059750862983233 0.8427793054688888 5 K 1 -1 3.9794 0.0 0.0 0.34613 0.0 0.0 735.4245602730108 283.11933313541255 1018.5438934084234 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.34613 + + 6 + 1 2.108 37385.8 1.0 4071 4363 8435 SUDHL4_400M_050219_1,8436 SUDHL4_400M_050219_1,8436,FKVWKKAML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8437 45.176 56.0 649360.0 25 0 101830.0 13153 HFLEKLTIS 9 61 544.3088754954598 1086.6031980577195 2 544.3094360232353 MULTI CID FTMS 0 0 0 8435 747694.375 0.4232083888944744 3 -0.23724365234375 2 Unmodified _HFLEKLTIS_ ENSG00000144406|ENST00000673920|UNC80;ENST00000489023.5_1_2:210693994-210832362:+|nuORF;nc|ENSG00000144406|Q8N2C7-2|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7|UNC80 1.844237919475145 0.850302753031785 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.108 34015.5 1.0 4072 4363 8435 SUDHL4_400M_050219_1,8437 SUDHL4_400M_050219_1,8437,HFLEKLTIS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8438 45.178 55.0 1044700.0 25 0 160430.0 + 11685 GLFQGKTPL 9 82 480.7795413116014 0 480.7794982790947 PEAK CID FTMS 0 0 0 8435 1123203.125 1.0 0 0.0 3 Unmodified _GLFQGKTPL_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 58.6788170122104 0.0182512554486535 5 {M(Oxidation (M))|F}QKGT 5 6 47.225 0.0 0.0 4.9216 0.0 0.0 170.10637158629032 225.1249025934204 395.2312741797107 0.0 0.0 0.0 0.0 0 1.274227503252014 0.0 1.055462187404089 0.5 {M(Oxidation (M))|F}QKGT 4.9216 - 121 + 1 2.108 50012.8 1.0 4073 4363 8435 SUDHL4_400M_050219_1,8438 SUDHL4_400M_050219_1,8438,GLFQGKTPL True True GLFQGKTPL 45.177691 480.779498279095 7911702.5 8435.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 5.946525891621907 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8439 45.18 83.0 623280.0 25 0 134000.0 + 23786 LVDASGEFTE 10 63 534.2483400770317 1066.4821272208633 2 534.2489501833916 MULTI CID FTMS 0 0 0 8435 700351.6875 1.0 0 0.0 4 Unmodified _LVDASGEFTE_ REV__ENSG00000038427|ENST00000265077|VCAN;REV__ENST00000513016.5_1_5:82832752-82876250:+|nuORF;REV__nc|ENSG00000038427|P13611-2|VCAN;REV__nc|ENSG00000038427|P13611-5|VCAN 19.256988751693697 0.5244284437930726 5 {I|L}VDE 4 -1 50.79 0.0 0.0 4.7624 0.0 0.0 0.0 607.2386568658811 607.2386568658811 28.571231544599485 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}VDE 4.7624 - 145 + 1 2.108 45632.7 1.0 4074 4363 8435 SUDHL4_400M_050219_1,8439 SUDHL4_400M_050219_1,8439,LVDASGEFTE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8440 45.182 94.0 380650.0 25 0 31743.0 40660 VLELADRFL 9 76 538.3088941531171 1074.603235373034 2 538.3091918826103 MULTI CID FTMS 0 0 0 8435 616372.0 0.9837131932421308 -1 0.1874160766601562 5 Unmodified _VLELADRFL_ ENSG00000178502|ENST00000319121|KLHL11 9.347437153973935 0.588369872918737 5 [{I|L}V]N 3 7 14.27 0.0 0.0 1.3279 0.0 0.0 0.0 745.3865965393028 745.3865965393028 2.051368718728813 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}V]N 1.3279 - 18 1 2.108 32369.1 1.0 4075 4363 8435 SUDHL4_400M_050219_1,8440 SUDHL4_400M_050219_1,8440,VLELADRFL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8441 45.189 386.0 492870.0 25 0 53931.0 + 9311 FIGIVAIGDR 10 126 530.8089199370141 1059.6032869408282 2 530.8094360232353 MULTI CID FTMS 0 0 0 8435 381056.03125 0.9353405168254462 -1 0.1874160766601562 6 Unmodified _FIGIVAIGDR_ REV__ENSG00000164879|ENST00000285381|CA3 5.731851221503515 0.7001233259664787 5 {I|L} 1 -1 10.0 0.0 0.0 0.94375 0.0 0.0 928.5083142619204 0.0 928.5083142619204 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.94375 + + 48 + 1 2.108 147540.6 1.0 4076 4363 8435 SUDHL4_400M_050219_1,8441 SUDHL4_400M_050219_1,8441,FIGIVAIGDR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8442 45.192 181.0 576020.0 25 0 103800.0 37100 TGSLRRPL 8 116 450.2746362878085 898.5347196424169 2 450.2745544314384 MULTI CID FTMS 0 0 0 8435 369783.0625 0.0666453389110359 -4 0.4403533935546875 7 Unmodified _TGSLRRPL_ ENSG00000167680|ENST00000586582|SEMA6B 0.6903765706972694 0.8201419426409876 5 {I|L} 1 7 10.0 0.0 0.0 1.1129 0.0 0.0 767.4399300689779 0.0 767.4399300689779 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1129 + + 6 + 1 2.108 85404.8 1.0 4077 4363 8435 SUDHL4_400M_050219_1,8442 SUDHL4_400M_050219_1,8442,TGSLRRPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8443 45.195 166.0 369540.0 25 0 57355.0 + 33707 SKMKRKQGKS 10 78 589.34291497251 1176.67127701182 2 589.3433715701103 MULTI CID FTMS 0 0 0 8435 350871.125 0.2962933680852946 6 -0.5014686584472656 8 Unmodified _SKMKRKQGKS_ REV__ENSG00000221866|ENST00000321063|PLXNA4;REV__nc|ENSG00000221866|Q9HCM2-2|PLXNA4;REV__nc|ENSG00000221866|Q9HCM2-3|PLXNA4 1.4819007175156935 0.719781833666733 5 N 1 -1 2.4743 0.0 0.0 0.21028 0.0 0.0 776.4964856073262 283.1186617486938 1059.61514735602 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.21028 - 2 + 1 2.108 54785.0 1.0 4078 4363 8435 SUDHL4_400M_050219_1,8443 SUDHL4_400M_050219_1,8443,SKMKRKQGKS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8444 45.209 800.0 586050.0 25 0 47904.0 42108 VRLRPPLQM 9 213 555.3355959682489 1108.6566390032976 2 555.3361694216728 MULTI CID FTMS 0 0 0 8435 296120.5 0.3437408291157695 -4 0.4403533935546875 9 Unmodified _VRLRPPLQM_ ENST00000508859.6_1_5:751252-755178:-|nuORF 4.3292370932331545 0.7635526921153418 5 {I|L} 1 8 10.0 0.0 0.0 0.90199 0.0 0.0 977.5616205480228 0.0 977.5616205480228 0.0 0.3222899461345907 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.90199 + + 153 + 1 2.108 347724.6 0.9800000190734864 4079 4363 8435 SUDHL4_400M_050219_1,8444 SUDHL4_400M_050219_1,8444,VRLRPPLQM False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8445 45.214 255.0 490340.0 25 0 127460.0 + 31043 RLIAQRYLL 9 87 573.3613308753138 1144.7081088174275 2 573.3614379763603 MULTI CID FTMS 0 0 0 8435 216741.6875 1.0 0 0.0 10 Unmodified _RLIAQRYLL_ ENSG00000041357|ENST00000044462|PSMA4;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4 30.63653989081413 0.1413794767160703 5 {I|L}R{I|L} 3 6 28.104 0.0 0.0 2.4551 0.0 0.0 0.0 759.4181002252561 759.4181002252561 17.619478172486467 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.4247425010840047 {I|L}R{I|L} 2.4551 - 60 + 1 2.108 97391.8 1.0 4080 4363 8435 SUDHL4_400M_050219_1,8445 SUDHL4_400M_050219_1,8445,RLIAQRYLL False True RLIAQRYLL 45.213922 573.36143797636 1559064.125 8435.0 ENSG00000041357|ENST00000044462|PSMA4;;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;;nc|ENSG00000041357|P25789-2|PSMA4 4.014490127563477 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8446 45.228 800.0 220110.0 25 0 40736.0 18151 KTPPRGEKVRA 11 119 619.8688324943491 1237.7231120554982 2 619.8693115115166 MULTI CID FTMS 0 0 0 8435 216601.453125 0.2353698764982011 -4 0.4403533935546875 11 Unmodified _KTPPRGEKVRA_ ENST00000526405.5_1_11:124956598-124956961:+|nuORF 2.498486711656943 0.8633599123570009 5 {I|L} 1 11 9.2694 0.0 0.0 0.7489 0.0 0.0 1106.6281088590122 0.0 1106.6281088590122 0.0 4.665266051846935 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.7489 - 28 + 1 2.108 128952.1 0.8199999928474426 4081 4363 8435 SUDHL4_400M_050219_1,8446 SUDHL4_400M_050219_1,8446,KTPPRGEKVRA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8447 45.242 800.0 185470.0 25 0 28990.0 + -1 ITMFMSARLS 10 130 594.7920959844315 1187.569639035663 2 594.7924682497978 MULTI CID FTMS 0 0 0 8435 118077.796875 1.0 0 0.0 12 2 Oxidation (M) _ITM(Oxidation (M))FM(Oxidation (M))SARLS_ REV__ENSG00000019485|ENST00000683152|PRDM11 14.40537977576856 0.6058337302021266 5 {I|L}RD[MT]VRS{I|L} 9 -1 37.673 0.0 0.0 3.1723 0.0 0.0 97.97543029299284 0.0 97.97543029299284 0.0 25.45454242628648 0.0 0.0 0 0.805462187404089 0.0 0.6989700043360187 0.7614393726401688 {I|L}RD[MT]VRS{I|L} 3.1723 - 299 + 1 2.108 114215.2 0.5899999737739563 4082 4363 8435 SUDHL4_400M_050219_1,8447 SUDHL4_400M_050219_1,8447,ITMFMSARLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8448 45.248 262.0 418440.0 25 0 30040.0 + 43463 WVDETLSSV 9 157 518.2534204070292 1034.4922878808584 2 518.2529785037041 MULTI CID FTMS 0 0 0 8435 116874.140625 0.4767847161583464 -1 0.1874160766601562 13 Unmodified _WVDETLSSV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 36.04419817259434 0.0971720506436186 5 {[RE]|[WV]}D{[ET]|[MV]}{I|L}SSV 9 0 {[RE]|[WV]}D{[ET]|[MV]}{I|L} + + 17.803 9.4703 1.274 1.7209 1.7209 52.693 0.0 0.0 0.0 0.0 3.913930577307109 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 + + {[RE]|[WV]}D{[ET]|[MV]}{I|L}SSV 1.7209 + + 249 + 1 2.108 87875.6 1.0 4083 4363 8435 SUDHL4_400M_050219_1,8448 SUDHL4_400M_050219_1,8448,WVDETLSSV True True WVDETLSSV 45.247626 518.252978503704 1423427.625 8435.0 nc|ENSG00000104517|O95071-2|UBR5;;ENSG00000104517|ENST00000520539|UBR5 2.9306291739145918 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8449 45.261 800.0 170380.0 25 0 9651.2 + -1 QVYCMKGNI 9 171 564.762616638276 1127.510680343352 2 564.7630493044853 MULTI CID FTMS 0 0 0 8435 84640.15625 0.5925326255717802 -1 0.1874160766601562 14 Carbamidomethyl (C),Oxidation (M) _QVYC(Carbamidomethyl (C))M(Oxidation (M))KGNI_ REV__ENSG00000187068|ENST00000335012|C3orf70 15.847184025352805 0.4077185912009129 5 [H{I|L}][DP]VC{[MS]|[{M(Oxidation (M))|F}A]}N{I|L} 10 -1 + 27.743 0.0 0.0 2.4605 2.4605 77.358 0.0 0.0 0.0 15.268317218181462 1.716590673155732 1.716590673155732 5.0 0 0.7619229975844686 1.6989700043360187 0.0 0.0 [H{I|L}][DP]VC{[MS]|[{M(Oxidation (M))|F}A]}N{I|L};[H{I|L}][DP]VCVD[KC];[DV]P[H{I|L}]C{[MS]|[{M(Oxidation (M))|F}A]}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VN{I|L};[DP]V[H{I|L}]C{[MS]|[{M(Oxidation (M))|F}A]}N{I|L};[DV]C[WE][H{I|L}]N{I|L};[DV]P[H{I|L}]CVD[KC] 2.4605;2.0171;0.46065;0.39922;0.11827;0.037488;0.017197 -;-;-;-;-;-;- 443 1 2.108 109585.5 0.4799999892711639 4084 4363 8435 SUDHL4_400M_050219_1,8449 SUDHL4_400M_050219_1,8449,QVYCMKGNI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8450 45.263 55.0 1416100.0 25 0 208830.0 + 45244 YSAIHVQLL 9 86 522.295737143275 1042.57692135335 2 522.2961913943291 MULTI CID FTMS 0 0 0 8435 958135.1875 1.0 0 0.0 15 Unmodified _YSAIHVQLL_ REV__ENSG00000205085|ENST00000682356|GARIN1A;REV__nc|ENSG00000205085|Q6NXP2|GARIN1A 2.059750862983233 0.8427793054688888 5 N 1 -1 9.1487 0.0 0.0 0.87751 0.0 0.0 910.5229490406532 0.0 910.5229490406532 0.0 9.148691423025213 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.87751 - 3 + 1 2.108 64243.5 1.0 4085 4363 8435 SUDHL4_400M_050219_1,8450 SUDHL4_400M_050219_1,8450,YSAIHVQLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8451 45.267 210.0 322010.0 25 0 115260.0 + 34385 SLTTARSFT 9 81 492.2620105976019 0 492.2614929080009 PEAK CID FTMS 0 0 0 8435 197523.21875 1.0 0 0.0 16 Unmodified _SLTTARSFT_ REV__ENSG00000155858|ENST00000286307|LSM11 10.823927491677226 0.3028200641087142 5 E 1 -1 5.4846 0.0 0.0 0.55822 0.0 0.0 754.3611661153226 96.08255182437732 850.4437179396999 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.55822 - 23 + 1 2.108 56719.4 1.0 4086 4363 8435 SUDHL4_400M_050219_1,8451 SUDHL4_400M_050219_1,8451,SLTTARSFT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8452 45.268 59.0 1198400.0 25 0 300890.0 + 19853 LHLLPPAR 8 68 458.788182620305 915.56181230741 2 458.7881652712822 MULTI CID FTMS 0 0 0 8435 172901.9375 0.0314915426849053 -4 0.4403533935546875 17 Unmodified _LHLLPPAR_ REV__ENSG00000110786|ENST00000358540|PTPN5;REV__nc|ENSG00000110786|P54829-2|PTPN5;REV__nc|ENSG00000110786|P54829-3|PTPN5 0.6903765706972694 0.8201419426409876 5 {I|L}Q 2 -1 4.9485 0.0 0.0 0.54049 0.0 0.0 476.3019684126819 195.09568201236564 671.3976504250476 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Q 0.54049 - 11 + 1 2.108 61228.7 1.0 4087 4363 8435 SUDHL4_400M_050219_1,8452 SUDHL4_400M_050219_1,8452,LHLLPPAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8453 45.283 800.0 144070.0 25 0 8684.0 + 1527 ALITDPDEMRM 11 135 646.3057560349165 1290.596959136633 2 646.3079101443291 MULTI CID FTMS 0 0 0 8435 101881.0625 1.0 0 0.0 18 Unmodified _ALITDPDEMRM_ ENSG00000141965|ENST00000269856|FEM1A 16.565877749689598 0.6905575015977202 5 [{I|L}A]{I|L}TDMMS{I|L}D 10 6 56.608 0.0 0.0 4.3862 0.0 0.0 0.0 197.09343897037343 197.09343897037343 34.906687179273995 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.7396518287104438 0.0 [{I|L}A]{I|L}TDMMS{I|L}D 4.3862 - 737 + 1 2.108 92663.5 0.5400000214576721 4088 4363 8435 SUDHL4_400M_050219_1,8453 SUDHL4_400M_050219_1,8453,ALITDPDEMRM False True ALITDPDEMRM 45.283319 646.307910144329 295564.5 8435.0 ENSG00000141965|ENST00000269856|FEM1A 5.280363082885742 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8455 45.288 35.0 1223300.0 25 0 268320.0 + -1 KLKKLHGMY 9 60 567.3297886536056 1132.6450243740112 2 567.3301269412041 MULTI CID FTMS 0 0 0 8454 1431505.75 0.4623661991801955 3 -0.1596450805664062 1 Oxidation (M) _KLKKLHGM(Oxidation (M))Y_ REV__ENST00000471188.5_1_7:92887474-92887687:+|nuORF 0.6014990680409731 0.8936861360942873 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.099 39812.1 1.0 4089 4364 8454 SUDHL4_400M_050219_1,8455 SUDHL4_400M_050219_1,8455,KLKKLHGMY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8456 45.29 74.0 761960.0 25 0 143100.0 19922 LIAHRKFK 8 70 506.8238461096696 1011.6331392861392 2 506.8238098025322 MULTI CID FTMS 0 0 0 8454 631146.6875 0.5688229599655451 1 -0.0749778747558593 2 Unmodified _LIAHRKFK_ ENSG00000198874|ENST00000359626|TYW1;ENSG00000277149|ENST00000620995|TYW1B;nc|ENSG00000277149|Q6NUM6-2|TYW1B 19.438996006549623 0.6237395211498085 5 {I|L}{I|L}AQE{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]} 9 5 + 76.098 0.0 0.0 7.5222 7.5222 93.444 0.0 0.0 0.0 57.98147957413485 4.762036441594191 4.762036441594191 9.208187539523747 0 1.579689690656103 2.0 0.0 0.0 {I|L}{I|L}AQE{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}A[AG]E{I|L}V{[QV]|[N{I|L}]|[RA]|[KV]} 7.5222;6.612 -;- 132 + 1 2.099 51278.9 1.0 4090 4364 8454 SUDHL4_400M_050219_1,8456 SUDHL4_400M_050219_1,8456,LIAHRKFK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8457 45.292 83.0 243660.0 25 0 25810.0 42125 VRRENHLPV 9 51 560.3219541867511 1118.629355440302 2 560.3223144412041 MULTI CID FTMS 0 0 0 8454 545936.5625 0.3675091946877307 4 -0.2874259948730469 3 Unmodified _VRRENHLPV_ ENST00000506844.1_1_6:15524658-15660633:-|nuORF;ENST00000514651.1_1_6:15524658-15533714:-|nuORF;nc|ENSG00000047579|Q96EV8-2|DTNBP1 1.844237919475145 0.850302753031785 5 E 1 8 1.5938 0.0 0.0 0.14248 0.0 0.0 904.497212351238 82.06697260074452 986.5641849519826 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + E 0.14248 + + 3 + 1 2.099 23959.3 1.0 4091 4364 8454 SUDHL4_400M_050219_1,8457 SUDHL4_400M_050219_1,8457,VRRENHLPV False False False False non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_1 8458 45.294 128.0 887600.0 25 0 147670.0 20676 LLRGPKHL 8 109 467.30156878525736 932.5885846373149 2 467.3012573122978 MULTI CID FTMS 0 0 0 8454 386434.9375 0.1469482847934159 -3 0.3428115844726562 4 Unmodified _LLRGPKHL_ nc|ENSG00000120094|P14653-2|HOXB1 2.889219685676258 0.8067950007271085 5 {I|L} 1 7 12.218 0.0 0.0 1.3102 0.0 0.0 801.4934288529382 0.0 801.4934288529382 0.0 4.476212463643421 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3102 + + 12 + 1 2.099 91651.0 1.0 4092 4364 8454 SUDHL4_400M_050219_1,8458 SUDHL4_400M_050219_1,8458,LLRGPKHL False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 8459 45.297 142.0 392450.0 25 0 114920.0 + 34311 SLRQRLLL 8 68 499.8271943592492 997.6398357852984 2 499.8272582888603 MULTI CID FTMS 0 0 0 8454 360087.75 0.2973470411321702 -3 0.3428115844726562 5 Unmodified _SLRQRLLL_ REV__ENST00000434679.5_1_X:153170523-153172179:+|nuORF 5.760428011301431 0.7893668129297577 5 {I|L} 1 -1 12.764 0.0 0.0 1.2794 0.0 0.0 866.5446037069765 0.0 866.5446037069765 0.0 10.289959734888434 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2794 + + 13 + 1 2.099 49594.6 1.0 4093 4364 8454 SUDHL4_400M_050219_1,8459 SUDHL4_400M_050219_1,8459,SLRQRLLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8460 45.302 281.0 346520.0 25 0 57509.0 + 14585 IIAQIKEKPQ 10 93 584.3568851986632 1166.6992174641264 2 584.3566161990166 MULTI CID FTMS 0 0 0 8454 329341.8125 0.1713813427243728 2 -0.12335205078125 6 Unmodified _IIAQIKEKPQ_ REV__ENSG00000101746|ENST00000261592|NOL4;REV__ENSG00000197183|ENST00000621426|NOL4L;REV__nc|ENSG00000101746|O94818-3|NOL4;REV__nc|ENSG00000101746|O94818-4|NOL4;REV__nc|ENSG00000197183|Q96MY1-2|NOL4L;REV__nc|ENSG00000197183|Q96MY1|NOL4L 1.6526216038709556 0.7189921496796233 5 K 1 -1 1.5938 0.0 0.0 0.13661 0.0 0.0 752.452496127992 283.11969613733623 1035.5721922653283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.13661 + + 9 + 1 2.099 78029.6 1.0 4094 4364 8454 SUDHL4_400M_050219_1,8460 SUDHL4_400M_050219_1,8460,IIAQIKEKPQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8461 45.305 150.0 415870.0 25 0 53639.0 + 40034 VGFSVRQRR 9 97 552.8229073465751 1103.63126175995 2 552.8229247927666 MULTI CID FTMS 0 0 0 8454 312687.78125 0.4298794843444271 2 -0.12335205078125 7 Unmodified _VGFSVRQRR_ REV__ENSG00000188976|ENST00000327044|NOC2L;REV__ENST00000452600.1_1_2:130987586-130988813:+|nuORF;REV__ENST00000477976.5_1_1:880076-889593:-|nuORF;REV__ENST00000483767.5_1_1:880076-882054:-|nuORF 4.3292370932331545 0.7635526921153418 5 AM 2 -1 10.969 0.0 0.0 0.99391 0.0 0.0 129.1020839139996 769.4266451471311 898.5287290611307 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AM 0.99391 - 5 + 1 2.099 54338.5 1.0 4095 4364 8454 SUDHL4_400M_050219_1,8461 SUDHL4_400M_050219_1,8461,VGFSVRQRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8462 45.308 113.0 486570.0 25 0 46657.0 + 1408 ALDDIIYRA 9 91 525.2849400762144 0 525.2846557497978 PEAK CID FTMS 0 0 0 8454 315119.3125 1.0 0 0.0 8 Unmodified _ALDDIIYRA_ ENSG00000122591|ENST00000432176|HYCC1;nc|ENSG00000122591|Q9BYI3-3|HYCC1 32.78568957990786 0.0971838787772021 5 DD{I|L}{I|L}[HD]A 7 4 36.726 0.0 0.0 3.5026 0.0 0.0 184.11970608427663 82.06705652408436 266.186762608361 0.0 0.0 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.0 DD{I|L}{I|L}[HD]A 3.5026 - 70 + 1 2.099 48371.0 1.0 4096 4364 8454 SUDHL4_400M_050219_1,8462 SUDHL4_400M_050219_1,8462,ALDDIIYRA True True ALDDIIYRA 45.307659 525.284655749798 1593706.125 8454.0 nc|ENSG00000122591|Q9BYI3-3|HYCC1;;ENSG00000122591|ENST00000432176|HYCC1 4.912043174107869 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8463 45.321 800.0 126440.0 25 0 38400.0 + 35584 STTLTLRKLSL 11 112 616.8821160022451 1231.74967907129 2 616.8823119997978 MULTI CID FTMS 0 0 0 8454 122449.9453125 0.2496968002485244 2 -0.12335205078125 9 Unmodified _STTLTLRKLSL_ REV__ENSG00000122591|ENST00000432176|HYCC1;REV__nc|ENSG00000122591|Q9BYI3-2|HYCC1 5.296884461304476 0.8501568894076437 5 {I|L} 1 -1 9.464 0.0 0.0 0.76833 0.0 0.0 1100.6546148396478 0.0 1100.6546148396478 0.0 4.859856381998782 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.76833 + + 23 + 1 2.099 78902.7 0.6899999976158142 4097 4364 8454 SUDHL4_400M_050219_1,8463 SUDHL4_400M_050219_1,8463,STTLTLRKLSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8464 45.329 443.0 209480.0 25 0 14959.0 + 20371 LLGPPPVGV 9 119 424.765143932117 847.515734931034 2 424.7653381228447 MULTI CID FTMS 0 0 0 8454 105818.09375 0.275714515561169 2 -0.12335205078125 10 Unmodified _LLGPPPVGV_ ENSG00000148337|ENST00000372938|CIZ1;ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-2|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-5|CIZ1 56.04830969593885 0.0282699710924866 5 {I|L}{I|L}GPPP 6 3 31.718 0.0 0.0 3.7425 0.0 0.0 0.0 270.141198148084 270.141198148084 15.739860381413626 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.0 0.0 + {I|L}{I|L}GPPP 3.7425 + + 268 1 2.099 75752.0 1.0 4098 4364 8454 SUDHL4_400M_050219_1,8464 SUDHL4_400M_050219_1,8464,LLGPPPVGV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8465 45.336 370.0 291310.0 25 0 36895.0 + 1398 ALATLIHQV 9 128 483.2920410037041 0 483.2920410037041 PEAK CID FTMS 0 0 0 -1 0 11 Unmodified _ALATLIHQV_ ENSG00000111652|ENST00000543155|COPS7A 61.357469665136826 0.0154611170783358 5 AT{I|L}{I|L}H 5 4 26.23 0.0 0.0 2.7193 0.0 0.0 184.1165334659024 242.1153048151 426.2318382810024 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.0 + AT{I|L}{I|L}H 2.7193 + + 237 + 1 2.099 87136.0 1.0 4099 4364 8454 SUDHL4_400M_050219_1,8465 SUDHL4_400M_050219_1,8465,ALATLIHQV True True ALATLIHQV 45.336007 483.292041003704 5206316.0 8454.0 ENSG00000111652|ENST00000543155|COPS7A 6.116466681162517 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8466 45.35 800.0 171980.0 25 0 37333.0 + 38177 TPQRLLRRPL 10 114 625.3958501837992 1248.7771474343983 2 625.3948852419853 MULTI CID FTMS 0 0 0 8454 79378.625 0.0927371304265538 2 -0.12335205078125 12 Unmodified _TPQRLLRRPL_ REV__ENST00000451837.5_1_22:24056493-24059477:-|nuORF;REV__ENST00000452737.5_1_22:24056401-24059477:-|nuORF;REV__nc|ENSG00000272578|Q6P575|GUSBP11 1.6526216038709556 0.7189921496796233 5 {M(Oxidation (M))|F} 1 -1 9.6777 0.0 0.0 0.77497 0.0 0.0 1083.69747932092 0.0 1083.69747932092 0.0 0.2137599021047531 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.77497 - 81 + 1 2.099 105612.9 0.6000000238418579 4100 4364 8454 SUDHL4_400M_050219_1,8466 SUDHL4_400M_050219_1,8466,TPQRLLRRPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8467 45.353 185.0 338500.0 25 0 24957.0 + 12223 GQVGGFINY 9 104 477.73826884596656 953.4619847587333 2 477.7378723025322 MULTI CID FTMS 0 0 0 8454 207716.125 0.519274612556636 -3 0.3428115844726562 13 Unmodified _GQVGGFINY_ ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE 23.1484247019978 0.2366544122328345 5 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[NG]{I|L}NY 8 5 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[NG]{I|L} + + 18.188 8.3894 1.2743 1.9075 1.9075 52.834 0.0 0.0 0.0 0.0 2.80848766326997 0.0 0.0 0 0.0 0.0 0.0 0.5 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[NG]{I|L}NY 1.9075 - 126 + 1 2.099 53864.0 1.0 4101 4364 8454 SUDHL4_400M_050219_1,8467 SUDHL4_400M_050219_1,8467,GQVGGFINY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8468 45.358 193.0 211730.0 25 0 22114.0 + 23378 LTDPDIHVL 9 88 511.77992544400064 1021.5452979548012 2 511.7815429568291 MULTI CID FTMS 0 0 0 8454 152639.296875 0.0678764840962117 5 -0.3875770568847656 14 Unmodified _LTDPDIHVL_ ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7 12.531546534597751 0.4974689918368763 5 [{I|L}T]C(Carbamidomethyl (C))H 4 6 21.911 0.0 0.0 2.1449 0.0 0.0 0.0 507.3093109765388 507.3093109765388 2.4472749489669354 0.0 0.0 0.0 0 0.2614393726401688 1.3979400086720375 0.2614393726401688 0.0 [{I|L}T]C(Carbamidomethyl (C))H 2.1449 - 123 1 2.099 36913.6 1.0 4102 4364 8454 SUDHL4_400M_050219_1,8468 SUDHL4_400M_050219_1,8468,LTDPDIHVL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8470 45.376 800.0 396590.0 25 0 36684.0 + 42470 QLVPALAKV 9 261 470.2736308279416 938.5327087226832 2 470.2732116580009 MULTI CID FTMS 0 0 0 8469 77050.1484375 0.1788277095961378 3 -0.2124481201171875 1 Unmodified _VTGLVHKW_ ENSG00000158161|ENST00000373871|EYA3;nc|ENSG00000158161|Q99504-5|EYA3;nc|ENSG00000158161|Q99504-2|EYA3;nc|ENSG00000158161|Q99504-3|EYA3;nc|ENSG00000158161|Q99504-4|EYA3 7.910154910731844 0.7763180056447161 5 {[HG]|PP}{M(Oxidation (M))|F}KV 5 6 20.111 0.0 0.0 2.1429 0.0 0.0 0.0 367.1995638483032 367.1995638483032 5.507349790630446 0.0 0.0 0.0 0 0.3807196863200844 0.1611509092627447 0.0 0.0 {[HG]|PP}{M(Oxidation (M))|F}KV 2.1429 - 403 + 1 2.149 239772.8 0.9900000095367432 4103 4365 8469 SUDHL4_400M_050219_1,8470 SUDHL4_400M_050219_1,8470,VTGLVHKW False False QLVPALAKV 45.375738 470.273211658001 904660.0625 8469.0 ENSG00000158161|ENST00000373871|EYA3;;nc|ENSG00000158161|Q99504-5|EYA3;;nc|ENSG00000158161|Q99504-2|EYA3;;nc|ENSG00000158161|Q99504-3|EYA3;;nc|ENSG00000158161|Q99504-4|EYA3 2.701783498128256 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8471 45.379 139.0 573160.0 25 0 45701.0 + 11941 GMQIPSTQF 9 115 504.7440865892813 1007.4736202453628 2 504.7441894412041 MULTI CID FTMS 0 0 0 8469 387772.59375 0.6750665153114422 -2 0.1888694763183593 2 Unmodified _GMQIPSTQF_ ENSG00000168036|ENST00000349496|CTNNB1 64.23631603340823 0.0237365939569086 5 [AG]TSP{M(Oxidation (M))|F} 6 6 26.52 0.0 0.0 2.6323 0.0 0.0 0.0 444.1874623686627 444.1874623686627 -0.8572521192556337 0.0 -0.8572521192556337 0.0 0 0.0 2.0 0.6861818737241735 0.0 [AG]TSP{M(Oxidation (M))|F} 2.6323 - 216 1 2.149 66413.4 1.0 4104 4365 8469 SUDHL4_400M_050219_1,8471 SUDHL4_400M_050219_1,8471,GMQIPSTQF True True GMQIPSTQF 45.378539 504.744189441204 14002340.0 8469.0 ENSG00000168036|ENST00000349496|CTNNB1 6.657100677490234 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8472 45.392 800.0 374160.0 25 0 75475.0 -1 HCDGDNDC 8 125 935.2658177850695 934.2585413184696 1 935.2659789919852 MULTI CID FTMS 0 0 0 8469 213726.53125 0.175124316069574 -2 0.1888694763183593 3 Carbamidomethyl (C) _HC(Carbamidomethyl (C))DGDNDC_ ENSG00000134569|ENST00000378623|LRP4 2.577480529830294 0.808687252328423 5 Q 1 -1 8.9794 0.0 0.0 0.96113 0.0 0.0 504.1305110031757 299.05706416694443 803.1875751701202 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 Q 0.96113 - 18 + 1 2.149 190612.6 0.75 4105 4365 8469 SUDHL4_400M_050219_1,8472 SUDHL4_400M_050219_1,8472,HCDGDNDC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8473 45.4 444.0 274990.0 25 0 14615.0 + 13510 HMMPDLPNV 9 135 527.2457636884856 1052.476974443771 2 527.2464477419853 MULTI CID FTMS 0 0 0 8469 167461.609375 0.3573360743381416 -2 0.1888694763183593 4 Unmodified _HMMPDLPNV_ ENSG00000134014|ENST00000256398|ELP3;nc|ENSG00000134014|Q9H9T3-2|ELP3;nc|ENSG00000134014|Q9H9T3-4|ELP3;nc|ENSG00000134014|Q9H9T3-5|ELP3 57.47134341890925 0.0274820932774257 5 [HM]M[DP]{I|L}PNV 9 0 + 46.492 0.0 0.0 4.4173 4.4173 81.556 0.0 0.0 0.0 5.14686918793565 14.384766509856531 5.14686918793565 5.14686918793565 0 0.6822333069283655 0.6777807052660807 0.6747425010840047 0.0 + + [HM]M[DP]{I|L}PNV;[EP]VMHMPNV;[EP]VHMMPNV;[DP]{I|L}MHMPNV;[DP]M{I|L}HMPNV;[DP]{I|L}HMMPNV;[NP]QQ{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PNV;[DP]M[HM]{I|L}PNV;[{I|L}P]DMHMPNV;[{I|L}P]DHMMPNV 4.4173;3.9283;3.6423;3.3394;3.1721;3.0534;2.8491;2.5807;2.4645;2.1785 +;-;-;-;-;-;-;-;-;- + 595 1 2.149 104486.7 1.0 4106 4365 8469 SUDHL4_400M_050219_1,8473 SUDHL4_400M_050219_1,8473,HMMPDLPNV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8474 45.407 356.0 230260.0 25 0 21557.0 + 33561 SILSEVQQA 9 114 487.7614454212372 973.5083379092744 2 487.7614929080009 MULTI CID FTMS 0 0 0 8469 137716.296875 0.3787006358107659 -2 0.1888694763183593 5 Unmodified _SILSEVQQA_ ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226555150-226558263:-|nuORF 42.09456458481378 0.0639583784996157 5 {[TV]|[{I|L}S]}EVQ 5 4 46.579 0.0 0.0 4.7846 0.0 0.0 0.0 414.1977049349181 414.1977049349181 28.136830964381623 0.0 0.0 0.0 0 0.0 2.0 1.1886218330464626 0.0 + {[TV]|[{I|L}S]}EVQ 4.7846 + + 358 1 2.149 67467.2 1.0 4107 4365 8469 SUDHL4_400M_050219_1,8474 SUDHL4_400M_050219_1,8474,SILSEVQQA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8476 45.423 800.0 277230.0 25 0 15988.0 + 35116 SQWEDIHVV 9 215 556.7717767778047 0 556.7709838747978 PEAK CID FTMS 0 0 0 8475 81149.09375 0.3521593837358943 2 -0.1640739440917968 1 Unmodified _SQWEDIHVV_ ENSG00000075884|ENST00000295095|ARHGAP15;ENST00000549436.5_1_2:144276854-144461094:+|nuORF 26.88365393820708 0.1386685954232994 5 EVVW 4 7 8.9279 0.0 0.0 0.80321 0.0 0.0 104.05586937416554 491.1919344537719 595.2478038279374 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EVVW 0.80321 - 134 + 1 2.149 167086.9 0.5400000214576721 4108 4366 8475 SUDHL4_400M_050219_1,8476 SUDHL4_400M_050219_1,8476,SQWEDIHVV False True SQWEDIHVV 45.422796 556.770983874798 1246093.0 8475.0 ENSG00000075884|ENST00000295095|ARHGAP15;;ENST00000549436.5_1_2:144276854-144461094:+|nuORF 4.093875805536906 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8477 45.437 800.0 272170.0 25 0 40451.0 16733 KFFRWVRR 8 170 597.8565151449595 1193.698477356719 2 597.8566772341728 MULTI CID FTMS 0 0 0 8475 182361.59375 0.1015963039068426 -5 0.4661636352539062 2 Unmodified _KFFRWVRR_ ENSG00000185955|ENST00000332375|SPACDR 2.059750862983233 0.8118298629782807 5 {I|L} 1 8 9.2694 0.0 0.0 0.77652 0.0 0.0 1062.6030469141392 0.0 1062.6030469141392 0.0 0.4470020561465517 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.77652 - 42 + 1 2.149 160785.1 0.7400000095367432 4109 4366 8475 SUDHL4_400M_050219_1,8477 SUDHL4_400M_050219_1,8477,KFFRWVRR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8478 45.443 363.0 357200.0 25 0 50773.0 + -1 LLMVKAVLD 9 150 509.3053051789959 1016.5960574247918 2 509.3054992556572 MULTI CID FTMS 0 0 0 8475 136967.25 0.7351851154499007 -1 0.0483741760253906 3 Oxidation (M) _LLM(Oxidation (M))VKAVLD_ REV__ENST00000504293.5_1_5:81571983-81572052:-|nuORF 13.90604991867851 0.4602628045680013 5 {I|L}{I|L}{M(Oxidation (M))|F}RT 5 -1 21.56 0.0 0.0 2.1208 0.0 0.0 0.0 383.24363123111567 383.24363123111567 9.021852173589728 0.0 0.0 0.0 0 0.1549471895720985 1.5228787452803376 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F}RT 2.1208 - 328 + 1 2.149 101246.2 1.0 4110 4366 8475 SUDHL4_400M_050219_1,8478 SUDHL4_400M_050219_1,8478,LLMVKAVLD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8480 45.449 112.0 340830.0 25 0 33276.0 + 13285 HLWNSIHGL 9 80 538.3088941531171 1074.603235373034 2 538.3094360232353 MULTI CID FTMS 0 0 0 8479 588920.125 0.9399007364518585 3 -0.3397789001464844 1 Unmodified _HIPVPVTEAL_ ENSG00000188554|ENST00000590996|NBR1;nc|ENSG00000188554|Q14596-2|NBR1 7.289230182591677 0.6929195370588109 5 [H{I|L}]{[WN]|[YH]}S{I|L} 6 7 27.14 0.0 0.0 2.5256 0.0 0.0 0.0 321.19836411742784 321.19836411742784 16.030768805449185 0.0 0.0 0.0 0 0.0 2.0 0.5 0.0 [H{I|L}]{[WN]|[YH]}S{I|L} 2.5256 - 27 1 2.117 33956.1 1.0 4111 4367 8479 SUDHL4_400M_050219_1,8480 SUDHL4_400M_050219_1,8480,HIPVPVTEAL False False HLWNSIHGL 45.448949 538.309436023235 1116433.875 8479.0 ENSG00000188554|ENST00000590996|NBR1;;nc|ENSG00000188554|Q14596-2|NBR1 5.6435160636901855 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8481 45.452 128.0 503160.0 25 0 81937.0 + 5283 DLAGPRRPIR 10 93 575.8432377057429 1149.6719224782858 2 575.8440429568291 MULTI CID FTMS 0 0 0 8479 878863.875 0.3594497052383083 5 -0.4533500671386719 2 Unmodified _DLAGPRRPIR_ REV__ENSG00000161671|ENST00000334976|EMC10;REV__nc|ENSG00000161671|Q5UCC4-2|EMC10 1.6526216038709556 0.7189921496796233 5 K 1 -1 4.6041 0.0 0.0 0.40047 0.0 0.0 779.45464102023 239.09319482974848 1018.5478358499784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.40047 - 6 + 1 2.117 55321.2 1.0 4112 4367 8479 SUDHL4_400M_050219_1,8481 SUDHL4_400M_050219_1,8481,DLAGPRRPIR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8482 45.453 13.0 569450.0 25 0 68105.0 -1 0 24 630.1708704349911 629.1635939683911 1 630.1709472537041 MULTI CID FTMS 0 0 0 8479 1766169.75 1.0 0 0.0 3 5 {I|L} 1 -1 3.0989 0.0 0.0 0.49255 0.0 0.0 386.28163398479575 126.77329431705311 513.0549283018489 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.49255 - 3 + 1 2.117 14357.4 1.0 4113 4367 8479 SUDHL4_400M_050219_1,8482 SUDHL4_400M_050219_1,8482, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8483 45.455 112.0 990440.0 25 0 277960.0 40497 VIRVLFLR 8 103 508.34065913337935 1014.6667653335588 2 508.3408080935478 MULTI CID FTMS 0 0 0 8479 1205106.625 1.0 0 0.0 4 Unmodified _VIRVLFLR_ ENSG00000171931|ENST00000395665|FBXW10;ENSG00000241322|ENST00000395906|FBXW10B;nc|ENSG00000171931|Q5XX13-2|FBXW10;nc|ENSG00000171931|Q5XX13-3|FBXW10;nc|ENSG00000171931|Q5XX13-4|FBXW10 2.889219685676258 0.8067950007271085 5 V 1 7 10.596 0.0 0.0 1.0443 0.0 0.0 897.5868835970338 0.0 897.5868835970338 0.0 0.3183453993468887 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.0443 + + 77 + 1 2.117 88976.4 1.0 4114 4367 8479 SUDHL4_400M_050219_1,8483 SUDHL4_400M_050219_1,8483,VIRVLFLR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8484 45.457 113.0 671860.0 25 0 78849.0 + 18375 KVPEWVDTV 9 98 536.7873164895409 1071.5600800458817 2 536.7878295779228 MULTI CID FTMS 0 0 0 8479 726921.6875 0.6293738538204002 -1 0.0362930297851562 5 Unmodified _KVPEWVDTV_ ENSG00000105372|ENST00000598742|RPS19 57.72198328787511 0.0273433238377839 5 [EP]WVKVDTV 9 4 + 78.567 0.0 0.0 7.332 7.332 94.799 0.0 0.0 0.0 12.596373105057552 14.973024840566469 12.596373105057552 12.596373105057552 0 0.9247425010840048 0.958607314841775 0.7887254899964358 0.3252574989159953 [EP]WVKVDTV;[WE]PVKVDTV;[EP]WVDTVKV;[EP]WVDVKTV;{[RE]|[WV]}[EP]KVDTV;{[MG]|[TS]}[HS]VKVDTV;{[ES]|[DT]|[{I|L}C]}VV[QP]VDTV;{[RE]|[WV]}[TP]RVDTV;[{I|L}P][WD]KVDTV;{NN|[MP]|[D{I|L}]|[EV]}[WP]KVDTV 7.332;6.1565;5.9704;5.9174;5.5469;5.3924;5.3165;5.266;5.2297;5.2182 -;-;-;-;-;-;-;-;-;- 1004 1 2.117 70315.4 1.0 4115 4367 8479 SUDHL4_400M_050219_1,8484 SUDHL4_400M_050219_1,8484,KVPEWVDTV True True KVPEWVDTV 45.457489 536.787829577923 7764319.0 8479.0 ENSG00000105372|ENST00000598742|RPS19 4.057153065999349 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8485 45.461 185.0 266070.0 25 0 30221.0 31881 RTLKALEYV 9 73 546.822337248335 1091.63012156347 2 546.8228637576103 MULTI CID FTMS 0 0 0 8479 691746.25 1.0 0 0.0 6 Unmodified _RTLKALEYV_ chr5:169840852-169934652|48|17.27|0.78|4.47|+|ENST00000519628|DOCK2,DOCK2;ENSG00000134516|ENST00000520908|DOCK2 2.059750862983233 0.8427793054688888 5 T 1 8 8.9258 0.0 0.0 0.81766 0.0 0.0 972.5712206619058 0.0 972.5712206619058 0.0 8.92578075976151 0.0 0.0 0 0.0 0.0 0.0 0.0 + T 0.81766 + + 10 + 1 2.117 42288.8 1.0 4116 4367 8479 SUDHL4_400M_050219_1,8485 SUDHL4_400M_050219_1,8485,RTLKALEYV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8486 45.471 580.0 195340.0 25 0 29130.0 + 40807 VLLRQRAAER 10 127 606.3700543584731 1210.725555783746 2 606.3710204958916 MULTI CID FTMS 0 0 0 8479 458005.15625 0.5182892587316399 -8 0.7138900756835938 7 Unmodified _VLLRQRAAER_ REV__ENSG00000262209|ENST00000576222|PCDHGB3;REV__nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3 1.4819007175156935 0.719781833666733 5 {I|L} 1 -1 6.9897 0.0 0.0 0.57731 0.0 0.0 431.296168770021 663.3234957330686 1094.6196645030896 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.57731 + + 52 + 1 2.117 84822.6 1.0 4117 4367 8479 SUDHL4_400M_050219_1,8486 SUDHL4_400M_050219_1,8486,VLLRQRAAER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8487 45.475 188.0 407790.0 25 0 68541.0 20603 LLPERPSYL 9 106 544.3088754954598 1086.6031980577195 2 544.3095580935478 MULTI CID FTMS 0 0 0 8479 433692.4375 0.2454776762899848 7 -0.4773674011230469 8 Unmodified _LLPERPSYL_ ENSG00000061938|ENST00000672887|TNK2;ENST00000420716.2_1_3:195591054-195595875:-|nuORF;nc|ENSG00000061938|Q07912-3|TNK2;nc|ENSG00000061938|Q07912|TNK2 13.50788311687929 0.4710407108020397 5 E 1 8 10.287 0.0 0.0 0.94667 0.0 0.0 543.3221668027732 411.22519861392817 954.5473654167012 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.3054621874040891 0.0 + E 0.94667 + + 35 + 1 2.117 62487.0 1.0 4118 4367 8479 SUDHL4_400M_050219_1,8487 SUDHL4_400M_050219_1,8487,LLPERPSYL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8488 45.482 414.0 333300.0 25 0 33585.0 + 23616 LTPSVKLTVC 10 143 530.8089199370141 1059.6032869408282 2 530.8091308474541 MULTI CID FTMS 0 0 0 8479 396457.65625 0.9731453610112096 3 -0.3397789001464844 9 Unmodified _LTPSVKLTVC_ REV__ENSG00000120318|ENST00000239440|ARAP3;REV__ENST00000512390.1_1_5:141033519-141041645:-|nuORF;REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3 7.289230182591677 0.6929195370588109 5 M 1 -1 12.218 0.0 0.0 1.1531 0.0 0.0 910.5511151652408 0.0 910.5511151652408 0.0 2.303654192657465 0.0 0.0 0 0.0 0.0 0.0 0.0 M 1.1531 - 207 + 1 2.117 110473.3 1.0 4119 4367 8479 SUDHL4_400M_050219_1,8488 SUDHL4_400M_050219_1,8488,LTPSVKLTVC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8489 45.492 548.0 369980.0 25 0 34634.0 27486 PKGQQGVR 8 197 435.2508587162222 868.4871644992444 2 435.2514221072197 MULTI CID FTMS 0 0 0 8479 257126.609375 0.5034329038823012 -1 0.0362930297851562 10 Unmodified _PKGQQGVR_ ENSG00000049089|ENST00000372748|COL9A2;ENST00000427563.1_1_1:40768460-40770015:-|nuORF;ENST00000482722.5_1_1:40766856-40777859:-|nuORF 2.302733041254933 0.8103549651115762 5 P 1 7 8.0277 0.0 0.0 0.92434 0.0 0.0 753.4230679800046 0.0 753.4230679800046 0.0 0.4704951783711397 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.92434 + + 22 + 1 2.117 159171.4 1.0 4120 4367 8479 SUDHL4_400M_050219_1,8489 SUDHL4_400M_050219_1,8489,PKGQQGVR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8490 45.506 800.0 213500.0 25 0 29061.0 42616 VTSTLELKI 9 162 502.30326893071526 0 502.3205444216728 PEAK CID FTMS 0 0 0 8479 27062.451171875 1.0 0 0.0 11 Unmodified _VTSTLELKI_ ENSG00000102935|ENST00000563137|ZNF423;ENSG00000198795|ENST00000361524|ZNF521;nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423 10.823927491677226 0.3028200641087142 5 P 1 9 1.1092 0.0 0.0 0.11064 0.0 0.0 818.4698973811587 84.04639612369374 902.5162935048525 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.11064 - 8 + 1 2.117 128823.3 0.699999988079071 4121 4367 8479 SUDHL4_400M_050219_1,8490 SUDHL4_400M_050219_1,8490,VTSTLELKI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8491 45.516 573.0 135910.0 25 0 28735.0 20509 LLLLLTVLTV 10 124 549.3800065726067 0 549.3803588747978 PEAK CID FTMS 0 0 0 8479 161950.234375 1.0 0 0.0 12 Unmodified _LLLLLTVLTV_ ENSG00000185499|ENST00000620103|MUC1;nc|ENSG00000185499|P15941-10|MUC1;nc|ENSG00000185499|P15941-13|MUC1;nc|ENSG00000185499|P15941-14|MUC1;nc|ENSG00000185499|P15941-5|MUC1;nc|ENSG00000185499|P15941-6|MUC1;nc|ENSG00000185499|P15941-7|MUC1;nc|ENSG00000185499|P15941-8|MUC1;nc|ENSG00000185499|P15941-9|MUC1;nc|ENSG00000185499|P15941|MUC1 3.944395688203298 0.3961065659209837 5 V 1 9 6.9897 0.0 0.0 0.63731 0.0 0.0 898.5714012293946 96.08273492984608 994.6541361592408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.63731 + + 17 + 1 2.117 65005.6 1.0 4122 4367 8479 SUDHL4_400M_050219_1,8491 SUDHL4_400M_050219_1,8491,LLLLLTVLTV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8492 45.531 800.0 187350.0 25 0 27876.0 -1 PRGRCCWWRYW 11 133 841.8829649508318 1681.7513769684635 2 841.8830444216728 MULTI CID FTMS 0 0 0 8479 137886.421875 1.0 0 0.0 13 2 Carbamidomethyl (C) _PRGRC(Carbamidomethyl (C))C(Carbamidomethyl (C))WWRYW_ ENST00000187830.2_1_19:45147391-45165075:+|nuORF 0.0 0.8751479354844584 5 [EP]WVDTVK 8 -1 37.742 0.0 0.0 2.2442 0.0 0.0 0.0 724.244718524204 724.244718524204 23.870356348788164 0.0 0.0 0.0 0 0.0 0.585026652029182 0.3494850021680094 0.2302046884880938 [EP]WVDTVK 2.2442 - 1416 1 2.117 99930.5 0.7599999904632568 4123 4367 8479 SUDHL4_400M_050219_1,8492 SUDHL4_400M_050219_1,8492,PRGRCCWWRYW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8493 45.532 60.0 571160.0 25 0 86625.0 + 39623 VDRGRALI 8 70 450.2746362878085 898.5347196424169 2 451.2776061892509 MULTI CID FTMS 0 0 0 8479 815394.4375 1.0 0 0.0 14 Unmodified _VDRGRALI_ REV__ENSG00000162383|ENST00000371494|SLC1A7;REV__nc|ENSG00000162383|O00341-2|SLC1A7 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.117 32112.5 1.0 4124 4367 8479 SUDHL4_400M_050219_1,8493 SUDHL4_400M_050219_1,8493,VDRGRALI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8494 45.542 562.0 244150.0 25 0 50361.0 30750 RHIKERTGRQT 11 145 461.2652515341023 0 461.2658874392509 PEAK CID FTMS 0 0 0 8479 191204.609375 1.0 0 0.0 15 Unmodified _RHIKERTGRQT_ ENST00000301919.8_1_11:105881770-105891784:-|nuORF 2.6312355333042263 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.117 105611.5 1.0 4125 4367 8479 SUDHL4_400M_050219_1,8494 SUDHL4_400M_050219_1,8494,RHIKERTGRQT False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8495 45.556 800.0 132380.0 25 0 27232.0 + 29519 QLLLPQRPRSL 11 120 660.9091786464953 0 660.9092895388603 PEAK CID FTMS 0 0 0 8479 182701.234375 1.0 0 0.0 16 Unmodified _QLLLPQRPRSL_ REV__ENSG00000143768|ENST00000366820|LEFTY2;REV__ENSG00000243709|ENST00000272134|LEFTY1;REV__nc|ENSG00000143768|O00292-2|LEFTY2 2.9952420565917617 0.4761840153648598 5 Q{I|L} 2 -1 9.464 0.0 0.0 0.71707 0.0 0.0 217.29753102170304 858.3410738580686 1075.6386048797715 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L} 0.71707 + + 43 + 1 2.117 86401.6 0.800000011920929 4126 4367 8479 SUDHL4_400M_050219_1,8495 SUDHL4_400M_050219_1,8495,QLLLPQRPRSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8496 45.571 800.0 215950.0 25 0 42491.0 20525 LLLQVLKQLDP 11 127 640.4011746708735 1278.787796408547 2 640.4015380740166 MULTI CID FTMS 0 0 0 8479 129778.8828125 0.391603248037139 -2 0.0846672058105468 17 Unmodified _LLLQVLKQLDP_ ENSG00000189132|ENST00000329357|FAM47B 6.2057823575117 0.8458686499021061 5 {I|L} 1 10 8.7724 0.0 0.0 0.686 0.0 0.0 1147.6919692374515 0.0 1147.6919692374515 0.0 0.0965257759769322 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.686 + + 98 + 1 2.117 134517.9 0.6899999976158142 4127 4367 8479 SUDHL4_400M_050219_1,8496 SUDHL4_400M_050219_1,8496,LLLQVLKQLDP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8498 45.575 25.0 1183200.0 25 0 194460.0 40864 VLPVPRVH 8 52 458.788182620305 915.56181230741 2 458.7881652712822 MULTI CID FTMS 0 0 0 8497 1680748.5 0.3061235975469656 1 -0.1001510620117187 1 Unmodified _VLPVPRVH_ ENST00000477264.1_1_1:9790462-9790525:-|nuORF 0.7936320650641473 0.8195151834710337 5 K 1 8 5.4846 0.0 0.0 0.59904 0.0 0.0 329.2211273482288 455.2273043268188 784.4484316750476 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.59904 - 1 + 1 2.093 26393.1 1.0 4128 4368 8497 SUDHL4_400M_050219_1,8498 SUDHL4_400M_050219_1,8498,VLPVPRVH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8499 45.577 49.0 314230.0 25 0 24925.0 42139 VRVPPRLP 8 37 467.30156878525736 932.5885846373149 2 467.3013488650322 MULTI CID FTMS 0 0 0 8497 342862.71875 0.1303792270074438 1 -0.1001510620117187 2 Unmodified _VRVPPRLP_ ENSG00000109686|ENST00000604030|SH3D19;ENST00000478503.6_1_4:152043245-152086876:-|nuORF;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7-3|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19 0.7936320650641473 0.8195151834710337 5 Y 1 8 3.0989 0.0 0.0 0.33229 0.0 0.0 466.435765889071 300.0598543756469 766.4956202647179 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.33229 - 2 + 1 2.093 21980.9 1.0 4129 4368 8497 SUDHL4_400M_050219_1,8499 SUDHL4_400M_050219_1,8499,VRVPPRLP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8500 45.578 33.0 1247000.0 25 0 253070.0 39936 VFVTVRTPMK 10 56 589.3429083257357 1176.6712637182711 2 589.3434326052666 MULTI CID FTMS 0 0 0 8497 2200659.5 0.6320795842679743 -3 0.2124481201171875 3 Unmodified _VFVTVRTPMK_ ENST00000335281.8_1_14:52435294-52435351:+|nuORF 1.6526216038709556 0.7189921496796233 5 N 1 10 5.4846 0.0 0.0 0.46611 0.0 0.0 776.4936160541566 283.1198824518188 1059.6134985059757 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.46611 - 1 + 1 2.093 34081.2 1.0 4130 4368 8497 SUDHL4_400M_050219_1,8500 SUDHL4_400M_050219_1,8500,VFVTVRTPMK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8501 45.579 64.0 397500.0 25 0 27865.0 + + 19901 HLYEDLFRA 9 54 582.3349210974716 1162.655289261743 2 582.3351928591728 MULTI CID FTMS 0 0 0 8497 792367.375 0.6118019753894761 -1 0.1277809143066406 4 Unmodified _LHRVRTGPID_ ENSG00000160949|ENST00000409379|TONSL;ENST00000497613.2_1_8:145667587-145667875:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL 3.944395688203298 0.708391353636983 5 {I|L} 1 -1 6.9897 0.0 0.0 0.60118 0.0 0.0 137.13400127521805 909.4117964007484 1046.5457976759665 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.60118 + + 7 + 1 2.093 28047.9 1.0 4131 4368 8497 SUDHL4_400M_050219_1,8501 SUDHL4_400M_050219_1,8501,LHRVRTGPID False False HLYEDLFRA 45.579332 582.335192859173 1299745.375 8497.0 ENSG00000160949|ENST00000409379|TONSL;;ENST00000497613.2_1_8:145667587-145667875:-|nuORF;;nc|ENSG00000160949|Q96HA7-2|TONSL 0.7365667770306269 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8502 45.582 131.0 465490.0 25 0 35680.0 + 1969 AMYPDQVQL 9 95 532.7571446547668 1063.4997363763334 2 532.7576782107353 MULTI CID FTMS 0 0 0 8497 538440.5625 0.5583154044792259 -1 0.1277809143066406 5 Unmodified _AMYPDQVQL_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 47.74868867922204 0.0453060283459952 5 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VCVEDQ{I|L} 9 6 + 43.855 0.0 0.0 4.1236 4.1236 74.507 0.0 0.0 0.0 0.0467724530690816 0.0467724530690816 0.0467724530690816 0.0467724530690816 0 0.0 0.0 0.0 0.7302046884880937 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VCVEDQ{I|L};{[DS]|[MA]|[CV]|TT}Y[DP]QV[Q{I|L}];[DP]QVYCV[Q{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}PVYCV[Q{I|L}];[DP]QYVCV[Q{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}PYVCV[Q{I|L}];{[DS]|[MA]|[CV]|TT}Y{[QN]|[E{I|L}]|[KN]}VQNP;{[DS]|[MA]|[CV]|TT}[DP]YQV[Q{I|L}];{[DS]|[MA]|[CV]|TT}{[WT]|[RM]}{[TV]|[{I|L}S]}DQ{I|L};{[DS]|[MA]|[CV]|TT}Y[DP][AG]V[Q{I|L}] 4.1236;4.1192;4.0017;3.9587;3.7439;3.7008;3.3714;3.2712;2.9278;2.9247 -;+;-;-;-;-;-;-;-;- + 371 + 1 2.093 55165.6 1.0 4132 4368 8497 SUDHL4_400M_050219_1,8502 SUDHL4_400M_050219_1,8502,AMYPDQVQL True True AMYPDQVQL 45.582005 532.757678210735 6512069.5 8497.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 7.784416516621907 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8503 45.584 117.0 505850.0 25 0 95622.0 32504 SALGYLHSL 9 84 480.7613505849781 959.5081482367564 2 480.7613098025322 MULTI CID FTMS 0 0 0 8497 510751.0 1.0 0 0.0 6 Unmodified _SALGYLHSL_ ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1 54.773552608820026 0.0299037012502309 5 {[SA]|[TG]}{I|L}GY{I|L}HS{I|L} 9 0 + 59.519 0.0 0.0 6.203 6.203 93.347 0.0 0.0 0.0 28.105253505360743 18.56220360841121 18.56220360841121 22.20622518428079 0 0.4247425010840047 1.6989700043360187 1.4049471895720984 0.0 + + {[SA]|[TG]}{I|L}GY{I|L}HS{I|L};{[SA]|[TG]}[YV]A{I|L}HS{I|L};{[SA]|[TG]}{I|L}[HT]{I|L}[YR];{[SA]|[TG]}{I|L}[{M(Oxidation (M))|F}V][DV]P{I|L};{[SA]|[TG]}{I|L}[HT][YR]{I|L};{[VA]|[{I|L}G]}{[QG]|[NA]}{I|L}YG[RP];{[SA]|[TG]}[YV]P[DV]P{I|L};[HS][KQ][HA][RP];[H{I|L}]{[ET]|[MV]}[HA][RP];{[TV]|[{I|L}S]}QN[{M(Oxidation (M))|F}V][RP] 6.203;3.8887;3.6634;2.6803;2.5024;1.5487;1.5092;0.83895;0.52522;0.47528 +;-;-;-;-;-;-;-;-;- + 248 + 1 2.093 49926.2 1.0 4133 4368 8497 SUDHL4_400M_050219_1,8503 SUDHL4_400M_050219_1,8503,SALGYLHSL True True SAIGYLHSL 45.584436 480.761309802532 2309117.5 8497.0 nc|ENSG00000101049|Q9HBY8-3|SGK2;;nc|ENSG00000101049|Q9HBY8-1|SGK2;;ENSG00000101049|ENST00000373100|SGK2 1.2414771715799968 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8504 45.588 168.0 271680.0 25 0 47582.0 + -1 MIVIFIFALR 10 65 619.8688324943491 1237.7231120554982 2 619.8690063357353 MULTI CID FTMS 0 0 0 8497 353401.46875 0.3840235550311264 1 -0.1001510620117187 7 Oxidation (M) _M(Oxidation (M))IVIFIFALR_ REV__ENST00000396299.6_1_7:28858911-28859157:+|nuORF 1.844237919475145 0.7181058121064529 5 K 1 -1 3.9794 0.0 0.0 0.32151 0.0 0.0 823.475444674442 283.11957727603755 1106.5950219504796 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.32151 - 3 + 1 2.093 40467.4 1.0 4134 4368 8497 SUDHL4_400M_050219_1,8504 SUDHL4_400M_050219_1,8504,MIVIFIFALR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8505 45.592 212.0 366670.0 25 0 117700.0 40440 VIKRLLAW 8 81 499.8271943592492 997.6398357852984 2 499.8271362185478 MULTI CID FTMS 0 0 0 8497 345157.375 0.2850180940095765 1 -0.1001510620117187 8 Unmodified _VIKRLLAW_ ENSG00000186645|ENST00000671986|SPDYE17;ENSG00000262461|ENST00000575125|SPDYE9;ENSG00000273520|ENST00000333385|SPDYE8;nc|ENSG00000184616|P0DUX1|SPDYE12;nc|ENSG00000286014|P0DUD4|SPDYE15 5.760428011301431 0.7893668129297577 5 GAW 3 6 15.15 0.0 0.0 1.5186 0.0 0.0 665.4918082968203 0.0 665.4918082968203 0.0 4.181212380090219 0.0 0.0 0 0.0 0.0 0.0 0.0 GAW 1.5186 - 74 + 1 2.093 63172.8 1.0 4135 4368 8497 SUDHL4_400M_050219_1,8505 SUDHL4_400M_050219_1,8505,VIKRLLAW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8506 45.596 209.0 288480.0 25 0 32855.0 42149 VSAGQLRR 8 94 443.7632971230894 885.5120413129788 2 443.7644836306572 MULTI CID FTMS 0 0 0 8497 322341.375 1.0 0 0.0 9 Unmodified _VSAGQLRR_ ENST00000489072.5_1_21:40720263-40720660:-|nuORF 2.302733041254933 0.8103549651115762 5 C 1 8 2.4743 0.0 0.0 0.27941 0.0 0.0 527.4903260803601 251.98859583072505 779.4789219110851 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.27941 - 4 + 1 2.093 53859.3 1.0 4136 4368 8497 SUDHL4_400M_050219_1,8506 SUDHL4_400M_050219_1,8506,VSAGQLRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8507 45.601 283.0 400800.0 25 0 55277.0 18148 KTPKLERGD 9 113 522.295737143275 1042.57692135335 2 522.2957641482353 MULTI CID FTMS 0 0 0 8497 311907.6875 0.3255361994520215 5 -0.345703125 10 Unmodified _KTPKLERGD_ ANKRD11|p.T410Nfs*28|1|0.26|ENSG00000167522|chr16:89285313-89285314|-/T|frameshift_variant;ENSG00000167522|ENST00000301030|ANKRD11;ENST00000378332.6_1_16:89358120-89379742:-|nuORF;ENST00000567699.1_1_16:89368006-89383442:-|nuORF 3.5964929083625545 0.7891324200061827 5 {I|L} 1 8 11.42 0.0 0.0 1.0954 0.0 0.0 911.4816282398718 0.0 911.4816282398718 0.0 1.6660733951769124 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0954 + + 25 + 1 2.093 92896.3 1.0 4137 4368 8497 SUDHL4_400M_050219_1,8507 SUDHL4_400M_050219_1,8507,KTPKLERGD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8508 45.606 274.0 183790.0 25 0 16025.0 + 14258 IEEKKFTPK 9 87 560.3219541867511 1118.629355440302 2 560.3224975466728 MULTI CID FTMS 0 0 0 8497 178020.359375 0.1198383171340107 8 -0.4814567565917969 11 Unmodified _IEEKKFTPK_ REV__ENSG00000122786|ENST00000361675|CALD1;REV__nc|ENSG00000122786|Q05682-2|CALD1;REV__nc|ENSG00000122786|Q05682-3|CALD1;REV__nc|ENSG00000122786|Q05682-6|CALD1 4.3292370932331545 0.7635526921153418 5 {[QN]|[E{I|L}]|[KN]}E 3 -1 11.839 0.0 0.0 1.0584 0.0 0.0 0.0 744.4440581593052 744.4440581593052 0.2456819149073688 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[QN]|[E{I|L}]|[KN]}E 1.0584 + + 24 1 2.093 44732.8 1.0 4138 4368 8497 SUDHL4_400M_050219_1,8508 SUDHL4_400M_050219_1,8508,IEEKKFTPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8509 45.607 48.0 898130.0 25 0 147990.0 -1 VINFHMKKV 9 64 566.3222341090335 1130.629915284867 2 566.3223754763603 MULTI CID FTMS 0 0 0 8497 929429.0 0.6721779342817227 -1 0.1277809143066406 12 Oxidation (M) _VINFHM(Oxidation (M))KKV_ ENST00000498116.1_1_4:15732587-15732905:-|nuORF 1.844237919475145 0.850302753031785 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.093 38793.7 1.0 4139 4368 8497 SUDHL4_400M_050219_1,8509 SUDHL4_400M_050219_1,8509,VINFHMKKV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8510 45.621 800.0 206960.0 25 0 72432.0 + 19413 LETKGLKLIVY 11 137 638.8953529258057 1275.7761529184113 2 638.8948852419853 MULTI CID FTMS 0 0 0 8497 216536.734375 0.738252530520466 -3 0.2124481201171875 13 Unmodified _LETKGLKLIVY_ REV__ENSG00000249715|ENST00000624922|FER1L5;REV__nc|ENSG00000249715|A0AVI2-2|FER1L5;REV__nc|ENSG00000249715|A0AVI2-4|FER1L5 5.296884461304476 0.8501568894076437 5 {I|L} 1 -1 9.464 0.0 0.0 0.74182 0.0 0.0 1144.6804020412612 0.0 1144.6804020412612 0.0 4.859856381998782 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.74182 + + 93 + 1 2.093 127183.8 0.8899999856948853 4140 4368 8497 SUDHL4_400M_050219_1,8510 SUDHL4_400M_050219_1,8510,LETKGLKLIVY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8511 45.624 148.0 349500.0 25 0 36357.0 + 11666 GLDPTQFRV 9 82 516.7770961840193 1031.5396394348386 2 516.7776977419853 MULTI CID FTMS 0 0 0 8497 216892.015625 0.930015773518458 -1 0.1277809143066406 14 Unmodified _GLDPTQFRV_ ENSG00000101868|ENST00000379068|POLA1;ENST00000494204.1_1_X:24833141-24859977:+|nuORF;nc|ENSG00000101868|P09884|POLA1 34.40172386719151 0.1061884637610825 5 {[VA]|[{I|L}G]}DPTQ 6 3 65.406 0.0 0.0 6.3406 0.0 0.0 0.0 417.2273348443969 417.2273348443969 55.406075122407685 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3494850021680094 0.4247425010840047 + {[VA]|[{I|L}G]}DPTQ 6.3406 + + 92 + 1 2.093 46284.1 1.0 4141 4368 8497 SUDHL4_400M_050219_1,8511 SUDHL4_400M_050219_1,8511,GLDPTQFRV True True GLDPTQFRV 45.624105 516.777697741985 2070962.375 8497.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1;;ENST00000494204.1_1_X:24833141-24859977:+|nuORF 7.194340070088704 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8512 45.628 217.0 170330.0 25 0 9451.0 29480 QLISIYLIF 9 79 555.3355959682489 1108.6566390032976 2 555.3362304568291 MULTI CID FTMS 0 0 0 8497 201848.84375 0.234308968499933 1 -0.1001510620117187 15 Unmodified _QLISIYLIF_ ENST00000543302.6_1_18:13760016-13760190:+|nuORF 10.823927491677226 0.5436922275383211 5 [Q{I|L}]{I|L} 3 6 20.501 0.0 0.0 1.8492 0.0 0.0 0.0 751.4118746393186 751.4118746393186 10.223857887895118 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 + [Q{I|L}]{I|L} 1.8492 + + 23 + 1 2.093 34433.9 1.0 4142 4368 8497 SUDHL4_400M_050219_1,8512 SUDHL4_400M_050219_1,8512,QLISIYLIF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8513 45.642 800.0 53812.0 25 0 3474.4 + -1 EELCECGCCCC 11 89 740.2090331912041 0 740.2090331912041 PEAK CID FTMS 0 0 0 -1 0 16 5 Carbamidomethyl (C) _EELC(Carbamidomethyl (C))EC(Carbamidomethyl (C))GC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))C_ REV__ENSG00000118242|ENST00000263268|MREG;REV__nc|ENSG00000118242|Q8N565-2|MREG 0.0 0.4761840153648598 5 E 1 -1 9.732 0.0 0.0 0.65828 0.0 0.0 1047.2719975021732 299.0572908990844 1346.3292884012576 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E 0.65828 + + 11 + 1 2.093 38047.1 0.6700000166893005 4143 4368 8497 SUDHL4_400M_050219_1,8513 SUDHL4_400M_050219_1,8513,EELCECGCCCC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8514 45.657 800.0 80527.0 25 0 6166.1 + 43464 WVDETLSSV 9 92 1035.4997178885146 1034.4924414219147 1 1035.500537097454 MULTI CID FTMS 0 0 0 8497 110262.453125 0.2825160416638476 4 -0.3255691528320312 17 Unmodified _WVDETLSSV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 37.97399986684836 0.0865783450051559 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RET{I|L}C(Carbamidomethyl (C)){I|L} 8 6 + 43.74 0.0 0.0 4.2281 4.2281 78.595 0.0 0.0 0.0 5.533504132662586 29.57116601236436 5.533504132662586 3.0102999566398125 0 0.3252574989159953 0.0 1.079689690656103 0.3807196863200844 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RET{I|L}C(Carbamidomethyl (C)){I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TRE{I|L}C(Carbamidomethyl (C)){I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}VWC(Carbamidomethyl (C)){I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RTE{I|L}C(Carbamidomethyl (C)){I|L};{[QS]|[NT]}[WQ]T{I|L}C(Carbamidomethyl (C)){I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RET{I|L}[CG]{I|L};{[QS]|[NT]}KDVWC(Carbamidomethyl (C)){I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TRE{I|L}[CG]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RET{I|L}SW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}VW[CG]{I|L} 4.2281;3.9371;3.6364;3.6227;3.5235;3.3328;3.2505;3.0418;2.9143;2.7411 -;-;-;-;-;-;-;-;-;- 903 1 2.093 47075.6 0.6499999761581421 4144 4368 8497 SUDHL4_400M_050219_1,8514 SUDHL4_400M_050219_1,8514,WVDETLSSV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8515 45.671 800.0 120290.0 25 0 20197.0 20010 LILYILVETR 10 125 616.8821160022451 1231.74967907129 2 616.8798095583916 MULTI CID FTMS 0 0 0 8497 89712.84375 0.1829401390780701 6 -0.3495864868164062 18 Unmodified _LILYILVETR_ AluSp_dup12528|chr4:108625371-108625684:-|3.58613224639157|0.0295741133308953|6.92|48.0|18|2|anti-sense 6.723162845929126 0.6955379296933136 5 {[QG]|[NA]}V{[HG]|PP}QQT{I|L}V 10 10 27.452 0.0 0.0 2.2287 0.0 0.0 0.0 181.15834541334007 181.15834541334007 17.17477275580256 0.0 0.0 0.0 0 0.0 0.0 1.174742501084005 0.2059771852360797 {[QG]|[NA]}V{[HG]|PP}QQT{I|L}V 2.2287 - 220 1 2.093 75446.3 0.7300000190734863 4145 4368 8497 SUDHL4_400M_050219_1,8515 SUDHL4_400M_050219_1,8515,LILYILVETR False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 8517 45.68 329.0 273010.0 25 0 18591.0 + 13511 HMMPDLPNV 9 125 527.2457636884856 1052.476974443771 2 527.2466308474541 MULTI CID FTMS 0 0 0 8516 239829.0625 0.5117565514018088 2 -0.1870841979980468 1 Unmodified _HMMPDLPNV_ ENSG00000134014|ENST00000256398|ELP3;nc|ENSG00000134014|Q9H9T3-2|ELP3;nc|ENSG00000134014|Q9H9T3-4|ELP3;nc|ENSG00000134014|Q9H9T3-5|ELP3 44.40701690623563 0.0526327925666318 5 {[TV]|[{I|L}S]}Q{I|L}[DP]MSY 9 8 {[TV]|[{I|L}S]}Q + + 33.123 18.684 5.6935 3.1471 3.1471 54.426 0.0 0.0 0.0 0.0 14.43820026016112 0.0 0.0 0 0.5 0.0 1.174742501084005 0.0 {[TV]|[{I|L}S]}Q{I|L}[DP]MSY 3.1471 - 438 + 1 2.082 84035.5 1.0 4146 4369 8516 SUDHL4_400M_050219_1,8517 SUDHL4_400M_050219_1,8517,HMMPDLPNV True True HMMPDLPNV 45.680494 527.246630847454 7508126.0 8516.0 nc|ENSG00000134014|Q9H9T3-5|ELP3;;nc|ENSG00000134014|Q9H9T3-2|ELP3;;ENSG00000134014|ENST00000256398|ELP3;;nc|ENSG00000134014|Q9H9T3-4|ELP3 6.720437685648601 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8518 45.682 80.0 735870.0 25 0 100160.0 + 39645 KLFHGEIWPA 10 72 399.885293880905 1196.634052242915 3 399.8853332400322 MULTI CID FTMS 0 0 0 8516 654229.3125 1.0 0 0.0 2 Unmodified _VDWHPIGFKV_ ENST00000447578.6_1_12:110930933-110930975:-|nuORF 8.97624648632007 0.6851160995914376 5 [DV]{[SA]|[TG]}{I|L}K{I|L}{M(Oxidation (M))|F} 8 7 43.734 0.0 0.0 3.6547 0.0 0.0 0.0 320.10077844791255 320.10077844791255 33.27623146104628 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.8494850021680094 [DV]{[SA]|[TG]}{I|L}K{I|L}{M(Oxidation (M))|F} 3.6547 - 74 + 1 2.082 51010.2 1.0 4147 4369 8516 SUDHL4_400M_050219_1,8518 SUDHL4_400M_050219_1,8518,VDWHPIGFKV False False KLFHGEIWPA 45.682308 399.885333240032 10803267.0 8516.0 ENST00000447578.6_1_12:110930933-110930975:-|nuORF 5.51689354578654 3.0 False 10.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8519 45.69 443.0 260130.0 25 0 26128.0 + 14604 IIEPSLRQL 9 142 534.8237355564557 1067.6329181797114 2 534.8238403201103 MULTI CID FTMS 0 0 0 8516 210153.40625 0.4839911551848497 2 -0.1870841979980468 3 Unmodified _IIEPSLRQL_ ENSG00000221983|ENST00000442744|UBA52 62.57269311338072 0.0246576765497938 5 {I|L}{I|L}EPS{I|L}[KC]V 9 3 68.145 0.0 0.0 6.3828 0.0 0.0 0.0 82.06708704166249 82.06708704166249 48.223506410013215 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.3807196863200844 1.0994850021680094 {I|L}{I|L}EPS{I|L}[KC]V 6.3828 - 400 + 1 2.082 89031.1 1.0 4148 4369 8516 SUDHL4_400M_050219_1,8519 SUDHL4_400M_050219_1,8519,IIEPSLRQL True True IIEPSLRQL 45.690188 534.8247 3080504.75 8516.0 ENSG00000221983|ENST00000442744|UBA52 3.843689521153768 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8520 45.696 296.0 193990.0 25 0 8084.3 + 11942 GMQIPSTQF 9 118 504.7440865892813 1007.4736202453628 2 504.7440978884697 MULTI CID FTMS 0 0 0 8516 188043.921875 0.3273623693671707 2 -0.1870841979980468 4 Unmodified _GMQIPSTQF_ ENSG00000168036|ENST00000349496|CTNNB1 19.256988751693697 0.3154191944385105 5 [AG]T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D{I|L}Q{M(Oxidation (M))|F} 9 5 [AG]T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D{I|L} + + 15.027 1.4798 0.20716 1.4916 1.4916 52.64 0.0 0.0 0.0 0.0 4.189563820384725 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 [AG]T{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D{I|L}Q{M(Oxidation (M))|F} 1.4916 - 221 + 1 2.082 47827.3 1.0 4149 4369 8516 SUDHL4_400M_050219_1,8520 SUDHL4_400M_050219_1,8520,GMQIPSTQF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8521 45.709 800.0 198200.0 25 0 35011.0 14011 IAEMGAYV 8 179 427.2080609410036 0 426.7449523806572 PEAK CID FTMS 0 0 0 8516 11607.35546875 1.0 0 0.0 5 Unmodified _IAEMGAYV_ ENSG00000134001|ENST00000256383|EIF2S1;ENST00000556724.1_1_14:67827147-67841270:+|nuORF 11.114462752807354 0.5290325060821968 5 P{I|L}AN 4 7 7.313 0.0 0.0 0.85793 0.0 0.0 275.0353712943134 179.1199892633422 454.1553605576556 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5242275032520141 P{I|L}AN 0.85793 - 45 + 1 2.082 126749.9 0.4399999976158142 4150 4369 8516 SUDHL4_400M_050219_1,8521 SUDHL4_400M_050219_1,8521,IAEMGAYV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8522 45.712 97.0 1508400.0 25 0 170320.0 -1 VCLKPTRKF 9 119 574.8365232565209 1147.6584935798417 2 574.8365356326103 MULTI CID FTMS 0 0 0 8516 579734.1875 1.0 0 0.0 6 Carbamidomethyl (C) _VC(Carbamidomethyl (C))LKPTRKF_ ENST00000604433.1_1_1:114544224-114544314:-|nuORF 3.5964929083625545 0.7891324200061827 5 H 1 -1 3.9794 0.0 0.0 0.34674 0.0 0.0 216.9505600855041 790.6092012994749 1007.5597613849792 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.34674 - 3 + 1 2.082 115219.3 1.0 4151 4369 8516 SUDHL4_400M_050219_1,8522 SUDHL4_400M_050219_1,8522,VCLKPTRKF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8523 45.72 449.0 397370.0 25 0 38601.0 + 26035 NMLEAVHTI 9 180 514.2653334142226 0 514.2653686404228 PEAK CID FTMS 0 0 0 8516 162423.78125 1.0 0 0.0 7 Unmodified _NMLEAVHTI_ ENSG00000112742|ENST00000369798|TTK;nc|ENSG00000112742|P33981-2|TTK 74.42276476219924 0.0184863773765765 5 {I|L}{M(Oxidation (M))|F}AVHE 6 5 20.232 0.0 0.0 1.9709 0.0 0.0 245.0805636655853 82.06704889468983 327.14761256027515 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 1.1549471895720984 0.0 {I|L}{M(Oxidation (M))|F}AVHE 1.9709 - 1057 + 1 2.082 134301.4 1.0 4152 4369 8516 SUDHL4_400M_050219_1,8523 SUDHL4_400M_050219_1,8523,NMLEAVHTI True True NMLEAVHTI 45.71951 514.265368640423 1235726.75 8516.0 ENSG00000112742|ENST00000369798|TTK;;nc|ENSG00000112742|P33981-2|TTK 4.30936328570048 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8524 45.733 800.0 242410.0 25 0 16291.0 + + 20945 GQVGGFINY 9 112 954.4688505448668 953.4615740782668 1 954.4709960818292 MULTI CID FTMS 0 0 0 8516 155773.453125 0.1749227371286741 2 -0.1870841979980468 8 Unmodified _LNFVANYN_ nc|ENSG00000138778|Q02224-3|CENPE;ENSG00000138778|ENST00000265148|CENPE 28.486842064014134 0.4448922141344407 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VAVE 7 -1 38.166 0.0 0.0 4.0029 0.0 0.0 0.0 178.02623815841164 178.02623815841164 11.994626686767877 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3252574989159953 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VAVE 4.0029 - 3116 1 2.082 125497.1 0.6200000047683716 4153 4369 8516 SUDHL4_400M_050219_1,8524 SUDHL4_400M_050219_1,8524,LNFVANYN False False GQVGGFINY 45.733358 954.470996081829 7413311.0 8516.0 nc|ENSG00000138778|Q02224-3|CENPE;;ENSG00000138778|ENST00000265148|CENPE 3.148333271344503 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8525 45.738 157.0 332790.0 25 0 31735.0 + 19602 LGAHVGHVAL 10 98 487.2833429870328 972.5521330408656 2 487.2665283083916 MULTI CID FTMS 0 0 0 8516 18679.875 0.1282536459393833 -2 0.2279319763183593 9 Unmodified _LGAHVGHVAL_ REV__ENST00000366971.8_1_1:213032234-213037122:+|nuORF 24.67388899826682 0.4143206957119831 5 {[TV]|[{I|L}S]}Q{[ET]|[MV]}{I|L}VA{I|L} 9 -1 + 47.826 0.0 0.0 4.9176 4.9176 79.673 0.0 0.0 0.0 9.035984316004216 8.824995917031941 8.824995917031941 2.04628427264403 0 0.7429928190999391 1.6989700043360187 0.4247425010840047 0.3807196863200844 {[TV]|[{I|L}S]}Q{[ET]|[MV]}{I|L}VA{I|L};{[TV]|[{I|L}S]}GA{[ET]|[MV]}{I|L}VA{I|L};{[VA]|[{I|L}G]}SA{[ET]|[MV]}{I|L}VA{I|L};{[TV]|[{I|L}S]}Q{[QN]|[E{I|L}]|[KN]}TVA{I|L};{[TV]|[{I|L}S]}GA{[QN]|[E{I|L}]|[KN]}TVA{I|L};{[VA]|[{I|L}G]}AS{[ET]|[MV]}{I|L}VA{I|L};{[VA]|[{I|L}G]}GT{[ET]|[MV]}{I|L}VA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{[ET]|[MV]}{I|L}VA{I|L};{[TV]|[{I|L}S]}GVVDTVA{I|L};{[QS]|[NT]}{I|L}{[ET]|[MV]}{I|L}VA{I|L} 4.9176;4.7072;3.9885;3.8618;3.6514;3.6102;3.3006;3.1707;3.1608;3.0422 -;-;-;-;-;-;-;-;-;- 481 1 2.082 45887.0 1.0 4154 4369 8516 SUDHL4_400M_050219_1,8525 SUDHL4_400M_050219_1,8525,LGAHVGHVAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8526 45.751 800.0 228290.0 25 0 41377.0 -1 0 109 904.9222210475676 1807.8298891619352 2 904.9235107302666 MULTI CID FTMS 0 0 0 8516 99265.9453125 0.9889556596552692 -1 0.1001510620117187 10 5 {I|L}{I|L}G{[CP]|[EA]}PP{M(Oxidation (M))|F}WP 10 -1 42.118 0.0 0.0 2.3298 0.0 0.0 0.0 697.2150134501852 697.2150134501852 3.946567509231613 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.5796896906561032 0.0 {I|L}{I|L}G{[CP]|[EA]}PP{M(Oxidation (M))|F}WP 2.3298 - 3730 1 2.082 120405.8 0.5199999809265137 4155 4369 8516 SUDHL4_400M_050219_1,8526 SUDHL4_400M_050219_1,8526, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8527 45.758 379.0 193970.0 25 0 15531.0 + 1664 ALNIATHVL 9 108 476.285252246056 0 476.2856628298759 PEAK CID FTMS 0 0 0 8516 90920.6015625 1.0 0 0.0 11 Unmodified _ALNIATHVL_ ENSG00000068438|ENST00000348411|FTSJ1;ENST00000466371.5_1_X:48339567-48341236:+|nuORF;nc|ENSG00000068438|Q9UET6-2|FTSJ1 23.1484247019978 0.1725298825155634 5 A 1 8 5.4846 0.0 0.0 0.57698 0.0 0.0 794.4290269757073 82.06707941226796 876.4961063879753 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.57698 + + 152 + 1 2.082 60234.6 1.0 4156 4369 8516 SUDHL4_400M_050219_1,8527 SUDHL4_400M_050219_1,8527,ALNIATHVL False True ALNIATHVL 45.758275 476.285662829876 699136.25 8516.0 nc|ENSG00000068438|Q9UET6-2|FTSJ1;;ENSG00000068438|ENST00000348411|FTSJ1;;ENST00000466371.5_1_X:48339567-48341236:+|nuORF 1.402701735496521 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8528 45.764 337.0 127210.0 25 0 10160.0 + 1399 ALATLIHQV 9 89 483.2921020388603 0 483.2921020388603 PEAK CID FTMS 0 0 0 -1 0 12 Unmodified _ALATLIHQV_ ENSG00000111652|ENST00000543155|COPS7A 7.289230182591677 0.3433663536648894 5 G 1 9 6.9897 0.0 0.0 0.72464 0.0 0.0 808.4428333728395 96.08262811832265 904.525461491162 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.72464 - 15 + 1 2.082 39188.4 1.0 4157 4369 8516 SUDHL4_400M_050219_1,8528 SUDHL4_400M_050219_1,8528,ALATLIHQV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8529 45.768 180.0 186060.0 25 0 17379.0 + 42437 VTFQKLLH 8 68 493.2934579955473 984.5723630578948 2 493.3164855837822 MULTI CID FTMS 0 0 0 8516 39498.171875 0.435316289659227 -2 0.2279319763183593 13 Unmodified _VTFQKLLH_ REV__ENSG00000153495|ENST00000283547|TEX29 4.75600775471527 0.7954636275367004 5 V 1 -1 10.0 0.0 0.0 1.0157 0.0 0.0 867.4927025738111 0.0 867.4927025738111 0.0 8.740940135031003 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0157 + + 19 + 1 2.082 31382.7 1.0 4158 4369 8516 SUDHL4_400M_050219_1,8529 SUDHL4_400M_050219_1,8529,VTFQKLLH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8530 45.783 800.0 96239.0 25 0 11460.0 -1 0 88 860.4720947146416 0 860.4720947146416 PEAK CID FTMS 0 0 0 -1 0 14 5 {I|L}Q 2 -1 5.9691 0.0 0.0 0.34726 0.0 0.0 1064.5489124744015 410.2074679010376 1474.7563803754392 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Q 0.34726 - 69 + 1 2.082 54200.3 0.4900000095367431 4159 4369 8516 SUDHL4_400M_050219_1,8530 SUDHL4_400M_050219_1,8530, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8532 45.788 77.0 1183300.0 25 0 270300.0 42721 VVATPRPKGRN 11 79 597.8565151449595 1193.698477356719 2 597.8569213747978 MULTI CID FTMS 0 0 0 8531 702886.125 0.3915881129296337 -1 0.111846923828125 1 Unmodified _VVATPRPKGRN_ ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7 1.1933415558491238 0.8695176722560516 5 H 1 11 10.0 0.0 0.0 0.83773 0.0 0.0 1038.6317181787877 0.0 1038.6317181787877 0.0 9.51544993495972 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.83773 - 3 + 1 2.087 72058.7 1.0 4160 4370 8531 SUDHL4_400M_050219_1,8532 SUDHL4_400M_050219_1,8532,VVATPRPKGRN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8533 45.792 196.0 811410.0 25 0 102600.0 + 40121 VGLGIRAVRDR 11 135 606.3700543584731 1210.725555783746 2 606.3705932497978 MULTI CID FTMS 0 0 0 8531 273089.84375 0.309034801798319 -5 0.4244461059570312 2 Unmodified _VGLGIRAVRDR_ REV__ENSG00000004139|ENST00000585482|SARM1;REV__nc|ENSG00000004139|Q6SZW1-2|SARM1 3.5964929083625545 0.858179447565866 5 {I|L}E{I|L}W 4 -1 22.18 0.0 0.0 1.832 0.0 0.0 431.2956026498228 235.1192415826781 666.414844232501 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {I|L}E{I|L}W 1.832 - 209 + 1 2.087 115621.6 1.0 4161 4370 8531 SUDHL4_400M_050219_1,8533 SUDHL4_400M_050219_1,8533,VGLGIRAVRDR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8534 45.793 16.0 2028500.0 25 0 371760.0 + 11743 GLIEKNIEL 9 63 514.8029752077183 1027.5913974822363 2 514.8031494021416 MULTI CID FTMS 0 0 0 8531 672908.875 0.1257873875365952 -5 0.4244461059570312 3 Unmodified _GLIEKNIEL_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 43.77239144664712 0.0547478964384323 5 {[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}{I|L}KNC(Carbamidomethyl (C)) 8 5 57.824 0.0 0.0 5.6271 0.0 0.0 0.0 79.07864557437733 79.07864557437733 41.26898056049677 0.0 0.0 0.0 0 0.6382104921644451 2.0 0.0 0.3807196863200844 {[VA]|[{I|L}G]}{I|L}{M(Oxidation (M))|F}{I|L}KNC(Carbamidomethyl (C)) 5.6271 - 127 + 1 2.087 29519.5 1.0 4162 4370 8531 SUDHL4_400M_050219_1,8534 SUDHL4_400M_050219_1,8534,GLIEKNIEL True True GLIEKNIEL 45.793089 514.803149402142 65284292.0 8531.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 4.320950587590535 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8535 45.795 73.0 1008000.0 25 0 136040.0 + 33790 SLDAKEIYL 9 101 526.2866457552456 1050.558738577291 2 526.2874633669853 MULTI CID FTMS 0 0 0 8531 381941.6875 0.7031143447445396 -1 0.111846923828125 4 Unmodified _SLDAKEIYL_ ENSG00000077232|ENST00000264065|DNAJC10;nc|ENSG00000077232|Q8IXB1-2|DNAJC10 49.52724829834842 0.0414064571532091 5 {[TV]|[{I|L}S]}DAG{I|L}S{I|L}Y{I|L} 10 3 + 100.95 0.0 0.0 9.6095 9.6095 91.68 0.0 0.0 0.0 20.79181246047625 83.95873464120562 20.79181246047625 5.255762612236907 0 1.9489700043360187 2.0 1.110924374808178 0.0 {[TV]|[{I|L}S]}DAG{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}DQ{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}NE{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}QD{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}DAG{I|L}SY{I|L}{I|L};{[TV]|[{I|L}S]}DQ{I|L}SY{I|L}{I|L};{[TV]|[{I|L}S]}GGE{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}NE{I|L}SY{I|L}{I|L};{[TV]|[{I|L}S]}[AG]D{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}QD{I|L}SY{I|L}{I|L} 9.6095;9.1092;8.9185;8.7074;8.5605;8.0602;8.042;7.8695;7.8309;7.6584 -;-;-;-;-;-;-;-;-;- 504 1 2.087 62324.2 1.0 4163 4370 8531 SUDHL4_400M_050219_1,8535 SUDHL4_400M_050219_1,8535,SLDAKEIYL True True SLDAKEIYL 45.79481 526.287463366985 3488148.75 8531.0 nc|ENSG00000077232|Q8IXB1-2|DNAJC10;;ENSG00000077232|ENST00000264065|DNAJC10 5.787461757659912 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8536 45.805 590.0 381760.0 25 0 33314.0 + -1 LGCHPPWE 8 195 498.2250035515678 994.4354541699356 2 498.2255126833916 MULTI CID FTMS 0 0 0 8531 228211.515625 1.0 0 0.0 5 Carbamidomethyl (C) _LGC(Carbamidomethyl (C))HPPWE_ REV__ENST00000585538.1_1_17:41020205-41020445:+|nuORF 28.17323086031832 0.4514957916281387 5 {I|L}C{I|L} 3 -1 22.229 0.0 0.0 2.2353 0.0 0.0 0.0 662.2426383120295 662.2426383120295 1.2131479062070163 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 {I|L}C{I|L} 2.2353 - 2048 + 1 2.087 171843.2 1.0 4164 4370 8531 SUDHL4_400M_050219_1,8536 SUDHL4_400M_050219_1,8536,LGCHPPWE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8537 45.808 119.0 243400.0 25 0 20462.0 + 8221 EPWVQTLLS 9 63 536.7873164895409 1071.5600800458817 2 536.7881347537041 MULTI CID FTMS 0 0 0 8531 215975.09375 0.1869927385852822 2 -0.1135711669921875 6 Unmodified _EPWVQTLLS_ REV__ENSG00000137628|ENST00000393743|DDX60 13.90604991867851 0.4602628045680013 5 TV 2 -1 21.376 0.0 0.0 1.9948 0.0 0.0 853.4328808044739 0.0 853.4328808044739 0.0 -0.8425691223387517 -0.8425691223387517 0.0 0 0.5 0.0 0.2396518287104437 0.0 TV 1.9948 - 42 + 1 2.087 30579.2 1.0 4165 4370 8531 SUDHL4_400M_050219_1,8537 SUDHL4_400M_050219_1,8537,EPWVQTLLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8538 45.811 173.0 479420.0 25 0 45224.0 + 18210 KVFDPVPVGV 10 102 528.807668127944 1055.600783322688 2 528.8077880740166 MULTI CID FTMS 0 0 0 8531 208644.28125 0.2343161160126788 -4 0.3760719299316406 7 Unmodified _KVFDPVPVGV_ ENSG00000135829|ENST00000367549|DHX9;ENST00000490519.1_1_1:182845328-182845691:+|nuORF 31.26834338654808 0.266153677697784 5 [VP]D{M(Oxidation (M))|F}KVPVGV 10 4 + 49.275 0.0 0.0 4.668 4.668 83.593 0.0 0.0 0.0 7.007046801327732 16.93066527840834 7.007046801327732 6.989700043360188 0 1.5172203223519531 1.5228787452803376 0.0 0.0 [VP]D{M(Oxidation (M))|F}KVPVGV;[VP]D{M(Oxidation (M))|F}VKPVGV;[VP]KV{M(Oxidation (M))|F}DPVGV;{I|L}{I|L}[EC]KVPVGV;[VP]K{M(Oxidation (M))|F}[{I|L}T]PVGV;{I|L}{I|L}[EC]VKPVGV;[VP]KV[C(Carbamidomethyl (C))R]AAR;[VP]KV{M(Oxidation (M))|F}S[VP][PS];[VP]GV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}][PS];[VG]PV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}][PS] 4.668;4.0058;3.4587;3.1335;2.6614;2.4713;2.0146;1.451;1.0024;0.67384 -;-;-;-;-;-;-;-;-;- 598 1 2.087 73536.2 1.0 4166 4370 8531 SUDHL4_400M_050219_1,8538 SUDHL4_400M_050219_1,8538,KVFDPVPVGV False True KVFDPVPVGV 45.810972 528.807788074017 10687591.0 8531.0 ENST00000490519.1_1_1:182845328-182845691:+|nuORF;;ENSG00000135829|ENST00000367549|DHX9 8.840666770935059 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8539 45.825 800.0 449030.0 25 0 58139.0 + 16990 KIWERIWSA 9 180 594.830154841655 1187.64575675011 2 594.8298217654228 MULTI CID FTMS 0 0 0 8531 195211.234375 0.3334193823663194 -4 0.3760719299316406 8 Unmodified _KIWERIWSA_ ENST00000532383.5_1_11:10825070-10825157:-|nuORF 76.41605946988834 0.0186187427369503 5 K{I|L}WER{I|L}WSA 9 0 + 81.376 0.0 0.0 6.8519 6.8519 89.986 0.0 0.0 0.0 35.73107455975516 3.670077439560359 3.670077439560359 7.403626894942448 0 2.734636880228201 1.2218487496163564 1.1968199613955393 0.0 + + K{I|L}WER{I|L}WSA;K{I|L}ADE[{I|L}T][Q{I|L}]SA;K{I|L}WE[{I|L}T][Q{I|L}]SA;K{I|L}ADE{[CT]|[{M(Oxidation (M))|F}G]}R[RP];[K{I|L}]DD{I|L}K{I|L}WSA;K{I|L}WER{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L};[K{I|L}]WER{I|L}WSA;K{I|L}AD{[CT]|[{M(Oxidation (M))|F}G]}ER[RP];[K{I|L}]DD{I|L}{I|L}KWSA;K{I|L}ADA{[{M(Oxidation (M))|F}D]|MM}R[RP] 6.8519;6.2285;5.6077;5.5955;5.4961;5.3446;5.1867;4.914;4.8405;4.8131 +;-;-;-;-;-;+;-;-;- + 7569 + 1 2.087 259021.3 0.800000011920929 4167 4370 8531 SUDHL4_400M_050219_1,8539 SUDHL4_400M_050219_1,8539,KIWERIWSA True True KIWERIWSA 45.824804 594.829821765423 6823822.0 8531.0 ENST00000532383.5_1_11:10825070-10825157:-|nuORF 8.636629422505697 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8540 45.83 279.0 343410.0 25 0 48571.0 + 19939 LIDGTKIRGD 10 112 544.3092768409791 1086.6040007487582 2 544.3087646365166 MULTI CID FTMS 0 0 0 -1 0 9 Unmodified _LIDGTKIRGD_ REV__ENSG00000072201|ENST00000263925|LNX1;REV__nc|ENSG00000072201|Q8TBB1-2|LNX1 7.608950283845883 0.6914406445242895 5 {I|L} 1 -1 9.8329 0.0 0.0 0.90492 0.0 0.0 955.5087381528582 0.0 955.5087381528582 0.0 0.9594276311945648 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.90492 + + 27 + 1 2.087 78338.2 1.0 4168 4370 8531 SUDHL4_400M_050219_1,8540 SUDHL4_400M_050219_1,8540,LIDGTKIRGD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8541 45.832 96.0 222140.0 25 0 28347.0 + 42531 SLLENIAKA 9 56 479.78149657495226 957.5484402167044 2 479.7820922732353 MULTI CID FTMS 0 0 0 8531 135607.640625 0.758801143558287 -1 0.111846923828125 10 Unmodified _VTLLDQAAK_ ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12 13.042465956692816 0.4836390050082244 5 {[TV]|[{I|L}S]}{I|L} 3 6 34.705 0.0 0.0 3.6244 0.0 0.0 0.0 641.3290499322874 641.3290499322874 27.715299873086607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[TV]|[{I|L}S]}{I|L} 3.6244 + + 14 + 1 2.087 24063.0 1.0 4169 4370 8531 SUDHL4_400M_050219_1,8541 SUDHL4_400M_050219_1,8541,VTLLDQAAK False False SLLENIAKA 45.832039 479.782092273235 1500279.0 8531.0 ENSG00000184634|ENST00000374080|MED12;;nc|ENSG00000184634|Q93074-2|MED12;;nc|ENSG00000184634|Q93074-3|MED12 2.3590113719304404 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8542 45.837 276.0 375460.0 25 0 53761.0 + 15009 ILSKDGVLYV 10 115 553.8266483263043 1105.6387437194085 2 553.8270751833916 MULTI CID FTMS 0 0 0 8531 114272.6640625 0.1294616923914847 -5 0.4244461059570312 11 Unmodified _ILSKDGVLYV_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87398353-87423749:+|nuORF 43.9818466556824 0.1155196613165264 5 {[TV]|[{I|L}S]}[QA]S{I|L}{I|L}{I|L}YV 10 6 + 58.638 0.0 0.0 5.3036 5.3036 78.744 0.0 0.0 0.0 2.9141016501251613 10.66223410070053 2.9141016501251613 0.4845500650402812 0 0.5 1.0969100130080565 1.6184151806525389 0.0 {[TV]|[{I|L}S]}[QA]S{I|L}{I|L}{I|L}YV;{[TV]|[{I|L}S]}[PS]KS{I|L}{I|L}YV;{[TV]|[{I|L}S]}[QA]{I|L}S{I|L}{I|L}YV;{[TV]|[{I|L}S]}[QA]S{I|L}{I|L}Y{I|L}V;{[TV]|[{I|L}S]}[PS]KS{I|L}Y{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}S[VG]{I|L}{I|L}{I|L}YV;{[QD]|[EN]|[WG]|[KD]|[RS]}[VG]S{I|L}{I|L}{I|L}YV;[KS][PS]S{I|L}{I|L}{I|L}YV;[KS]D[VG]{I|L}{I|L}{I|L}YV;{[QD]|[EN]|[WG]|[KD]|[RS]}S{I|L}[VG]{I|L}{I|L}YV 5.3036;5.2597;4.8282;4.3979;4.3541;4.3091;4.3091;4.2628;4.2628;3.993 -;-;-;-;-;-;-;-;-;- 957 1 2.087 81109.5 1.0 4170 4370 8531 SUDHL4_400M_050219_1,8542 SUDHL4_400M_050219_1,8542,ILSKDGVLYV True True ILSKDGVLYV 45.837137 553.827075183392 10831958.0 8531.0 ENST00000454465.1_1_2:87398353-87423749:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 4.422351678212483 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8543 45.84 76.0 387000.0 25 0 32626.0 + 19312 LELIKGRSV 9 56 507.8191197383949 1013.6236865435898 2 507.8191100955009 MULTI CID FTMS 0 0 0 8531 106190.2578125 0.6532915049221006 -1 0.111846923828125 12 Unmodified _LELIKGRSV_ REV__ENSG00000189091|ENST00000302516|SF3B3;REV__nc|ENSG00000189091|Q15393-2|SF3B3 15.847184025352805 0.4077185912009129 5 {I|L}VW 3 -1 31.198 0.0 0.0 3.0779 0.0 0.0 597.3605213849625 0.0 597.3605213849625 0.0 18.010299956639813 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}VW 3.0779 - 36 1 2.087 32306.7 1.0 4171 4370 8531 SUDHL4_400M_050219_1,8543 SUDHL4_400M_050219_1,8543,LELIKGRSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8544 45.844 214.0 280030.0 25 0 22785.0 42124 VRRDGAVP 8 112 435.2508587162222 868.4871644992444 2 435.2509033083916 MULTI CID FTMS 0 0 0 8531 105096.4140625 0.2057701964324403 2 -0.1135711669921875 13 Unmodified _VRRDGAVP_ ENST00000303212.2_1_19:5824142-5828303:+|nuORF 0.7936320650641473 0.8195151834710337 5 {I|L} 1 8 9.6777 0.0 0.0 1.1143 0.0 0.0 737.3919629385007 0.0 737.3919629385007 0.0 6.121191356816691 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1143 - 20 + 1 2.087 51709.2 1.0 4172 4370 8531 SUDHL4_400M_050219_1,8544 SUDHL4_400M_050219_1,8544,VRRDGAVP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8545 45.848 234.0 292070.0 25 0 16370.0 + 16992 KIWERIWSA 9 112 396.8886271786338 1187.6440521361014 3 396.8886901736259 MULTI CID FTMS 0 0 0 8531 95782.3359375 0.4615031672836661 -4 0.3760719299316406 14 Unmodified _KIWERIWSA_ ENST00000532383.5_1_11:10825070-10825157:-|nuORF 7.101721422024254 0.6667666702315642 5 [K{I|L}]DD{I|L}WSRR 9 5 + 26.771 0.0 0.0 2.2541 2.2541 82.797 0.0 0.0 0.0 3.755116374865505 5.801400647509535 3.755116374865505 13.187587626244127 0 0.0 0.8860566476931632 0.3807196863200844 0.0 [K{I|L}]DD{I|L}WSRR;[K{I|L}]DD{I|L}{[VA]|[{I|L}G]}CRR;[K{I|L}][WE][K{I|L}]WW;[K{I|L}][WE]W[K{I|L}]W 2.2541;1.1437;1.1346;0.54605 -;-;-;- 166 1 2.087 60095.3 1.0 4173 4370 8531 SUDHL4_400M_050219_1,8545 SUDHL4_400M_050219_1,8545,KIWERIWSA False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8546 45.858 544.0 263060.0 25 0 30468.0 44362 YLRLLQRM 8 179 546.822337248335 1091.63012156347 2 546.8231078982353 MULTI CID FTMS 0 0 0 8531 106400.9765625 0.1538150392033205 3 -0.1337051391601562 15 Unmodified _YLRLLQRM_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 5.760428011301431 0.7893668129297577 5 {I|L} 1 7 11.259 0.0 0.0 1.0314 0.0 0.0 960.535118366984 0.0 960.535118366984 0.0 -5.420031906024569 -5.420031906024569 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0314 + + 636 + 1 2.087 113913.3 1.0 4174 4370 8531 SUDHL4_400M_050219_1,8546 SUDHL4_400M_050219_1,8546,YLRLLQRM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8548 45.863 17.0 2855400.0 25 0 677320.0 39937 VFVTVRTPMK 10 61 589.3429083257357 1176.6712637182711 2 589.3431884646416 MULTI CID FTMS 0 0 0 8547 3481617.75 1.0 0 0.0 1 Unmodified _VFVTVRTPMK_ ENST00000335281.8_1_14:52435294-52435351:+|nuORF 1.6526216038709556 0.7189921496796233 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.087 42502.9 1.0 4175 4371 8547 SUDHL4_400M_050219_1,8548 SUDHL4_400M_050219_1,8548,VFVTVRTPMK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8549 45.864 40.0 801580.0 25 0 126460.0 -1 VINFHMKKV 9 55 566.3222341090335 1130.629915284867 2 566.3223754763603 MULTI CID FTMS 0 0 0 8547 1262175.875 0.9128258020329963 2 -0.0584678649902343 2 Oxidation (M) _VINFHM(Oxidation (M))KKV_ ENST00000498116.1_1_4:15732587-15732905:-|nuORF 1.844237919475145 0.850302753031785 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.087 33643.2 1.0 4176 4371 8547 SUDHL4_400M_050219_1,8549 SUDHL4_400M_050219_1,8549,VINFHMKKV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8550 45.865 45.0 407090.0 25 0 31284.0 + 13488 HLVSSSIKHR 10 52 582.3349210974716 1162.655289261743 2 582.3352538943291 MULTI CID FTMS 0 0 0 8547 1075447.0 0.8303731574343101 2 -0.0584678649902343 3 Unmodified _HLVSSSIKHR_ REV__ENST00000464585.1_1_3:51741837-51742137:+|nuORF 1.6526216038709556 0.7189921496796233 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.087 19982.5 1.0 4177 4371 8547 SUDHL4_400M_050219_1,8550 SUDHL4_400M_050219_1,8550,HLVSSSIKHR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8551 45.866 32.0 1660300.0 25 0 203810.0 44268 YLLAEEPHVE 10 70 600.3010018075069 1198.5874506818136 2 600.3015624880791 MULTI CID FTMS 0 0 0 8547 950331.3125 0.5097206718967676 -4 0.4150161743164062 4 Unmodified _YLLAEEPHVE_ ENSG00000186150|ENST00000334179|UBL4B 14.838274106304384 0.5985701837916485 5 Y{I|L}YEDE 6 6 68.404 0.0 0.0 5.7071 0.0 0.0 0.0 383.24131189517817 383.24131189517817 61.41441272380455 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 Y{I|L}YEDE 5.7071 - 46 + 1 2.087 42741.0 1.0 4178 4371 8547 SUDHL4_400M_050219_1,8551 SUDHL4_400M_050219_1,8551,YLLAEEPHVE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8552 45.868 65.0 749230.0 25 0 60546.0 + 40626 VLDDKLYVV 9 88 532.3052717116434 1062.5959904900867 2 532.3056518435478 MULTI CID FTMS 0 0 0 8547 421804.375 0.7034709962983934 -3 0.2872352600097656 5 Unmodified _VLDDKLYVV_ ENSG00000109790|ENST00000504108|KLHL5;nc|ENSG00000109790|Q96PQ7-2|KLHL5;nc|ENSG00000109790|Q96PQ7-3|KLHL5;nc|ENSG00000109790|Q96PQ7-4|KLHL5;nc|ENSG00000109790|Q96PQ7-5|KLHL5;nc|ENSG00000109790|Q96PQ7|KLHL5 19.256988751693697 0.3154191944385105 5 [{I|L}V]YWWVVV 8 5 + 34.314 0.0 0.0 3.2293 3.2293 75.739 0.0 0.0 0.0 2.230749808046326 4.877203139966326 2.230749808046326 2.513487579716763 0 0.9419628234359578 2.0 0.0 0.0 [{I|L}V]YWWVVV;{[QN]|[E{I|L}]|[KN]}[QT]YV{I|L}VV;[Q{I|L}]{[ET]|[MV]}YV{I|L}VV;{[QN]|[E{I|L}]|[KN]}[QT]Y{I|L}VVV;[Q{I|L}]{[ET]|[MV]}Y{I|L}VVV;{[QV]|[N{I|L}]|[RA]|[KV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}YV{I|L}VV;{[QV]|[N{I|L}]|[RA]|[KV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Y{I|L}VVV;{[QN]|[E{I|L}]|[KN]}[QT][{I|L}V]YVV;[Q{I|L}]{[ET]|[MV]}[{I|L}V]YVV;[Y{I|L}]VWWVVV 3.2293;2.9927;2.827;2.5437;2.378;2.2277;1.7787;1.0624;0.8967;0.78166 -;-;-;-;-;-;-;-;-;- 144 1 2.087 48735.3 1.0 4179 4371 8547 SUDHL4_400M_050219_1,8552 SUDHL4_400M_050219_1,8552,VLDDKLYVV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8553 45.87 117.0 583110.0 25 0 85590.0 + 39396 GLDALKVTV 9 98 458.788182620305 915.56181230741 2 458.7884399294853 MULTI CID FTMS 0 0 0 8547 380538.53125 0.0693094916886663 4 -0.1117324829101562 6 Unmodified _VAKRRSLS_ ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79827372-79827747:-|nuORF 10.183394434864962 0.7604730176254005 5 {[VA]|[{I|L}G]}DA 4 6 20.891 0.0 0.0 2.2817 0.0 0.0 0.0 556.3700147822725 556.3700147822725 9.781381439366186 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}DA 2.2817 - 100 1 2.087 58085.7 1.0 4180 4371 8547 SUDHL4_400M_050219_1,8553 SUDHL4_400M_050219_1,8553,VAKRRSLS False False GLDALKVTV 45.870136 458.788439929485 1961041.5 8547.0 ENSG00000159399|ENST00000290573|HK2;;ENST00000447818.2_1_X:79827372-79827747:-|nuORF 4.431067864100139 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8554 45.873 160.0 349300.0 25 0 66351.0 14288 IEKIPTAKPEL 11 76 619.8688324943491 1237.7231120554982 2 619.8692504763603 MULTI CID FTMS 0 0 0 8547 302652.3125 0.3288770060739636 4 -0.1117324829101562 7 Unmodified _IEKIPTAKPEL_ ENSG00000119707|ENST00000261973|RBM25 0.9622753412299312 0.8706078577147922 5 Y 1 11 10.969 0.0 0.0 0.88623 0.0 0.0 1056.6484030484653 0.0 1056.6484030484653 0.0 1.054266826574466 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.88623 - 6 + 1 2.087 47511.5 1.0 4181 4371 8547 SUDHL4_400M_050219_1,8554 SUDHL4_400M_050219_1,8554,IEKIPTAKPEL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8555 45.876 140.0 371080.0 25 0 12791.0 + -1 LVLDWVHG 8 97 938.4348017958794 1874.8550506585584 2 938.9358398318292 MULTI CID FTMS 0 0 0 8547 274187.8125 0.6725024751266727 -4 0.4150161743164062 8 ENSG00000167716|ENST00000409644|WDR81;nc|ENSG00000167716|Q562E7-4|WDR81 5 EY{M(Oxidation (M))|F}ANQQE 8 -1 42.103 0.0 0.0 2.2457 0.0 0.0 343.20412400015863 519.1834200494749 862.3875440496336 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 EY{M(Oxidation (M))|F}ANQQE 2.2457 - 928 + 1 2.087 40178.6 1.0 4182 4371 8547 SUDHL4_400M_050219_1,8555 SUDHL4_400M_050219_1,8555, False False LVLDWVHG 45.876172 938.4348 5471047.5 8547.0 ENSG00000167716|ENST00000409644|WDR81;;nc|ENSG00000167716|Q562E7-4|WDR81 0.5977904796600342 1.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8556 45.879 157.0 399380.0 25 0 56286.0 + 20597 LLPEGPPAI 9 88 453.768534270342 905.522515607484 2 453.7682067751884 MULTI CID FTMS 0 0 0 8547 227976.109375 0.316307677352477 -8 0.6885528564453125 9 Unmodified _LLPEGPPAI_ ENSG00000051108|ENST00000439977|HERPUD1;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 56.541270873467816 0.0279970378729908 5 {I|L}{I|L}[EP]GPPA{I|L} 9 0 + 63.606 0.0 0.0 7.0242 7.0242 96.137 0.0 0.0 0.0 19.20355538930252 14.973024840566469 14.973024840566469 36.37463476178467 0 1.3494850021680094 2.0 0.4247425010840047 0.0 + + {I|L}{I|L}[EP]GPPA{I|L};[EP]GP[PA]{I|L}{I|L}{I|L};[PG]EP[PA]{I|L}{I|L}{I|L};[PG][PA][EP]{I|L}{I|L}{I|L};[PA]DP[PA]{I|L}{I|L}{I|L};[PA]PD[PA]{I|L}{I|L}{I|L};[PA]PG[EP]{I|L}{I|L}{I|L};[PG][PA]{I|L}[EP]{I|L}{I|L};[R{M(Oxidation (M))|F}][MN]{I|L}{I|L}{I|L};[PA]PG{I|L}[EP]{I|L}{I|L} 7.0242;3.0072;2.5859;1.3745;1.0805;0.83549;0.83549;0.60263;0.48561;0.063591 +;-;-;-;-;-;-;-;-;- + 170 + 1 2.087 53689.5 1.0 4183 4371 8547 SUDHL4_400M_050219_1,8556 SUDHL4_400M_050219_1,8556,LLPEGPPAI True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8557 45.883 220.0 309040.0 25 0 72664.0 + 33920 SLGKVFGV 8 98 403.74201964548223 805.4694863577645 2 403.7420226931572 MULTI CID FTMS 0 0 0 8547 206641.40625 0.6566405848522899 -4 0.4150161743164062 10 Unmodified _SLGKVFGV_ ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF 32.116972079565 0.368454113111938 5 {[TV]|[{I|L}S]}[KG]V{M(Oxidation (M))|F}GV 8 0 + 32.079 0.0 0.0 3.9826 3.9826 87.522 0.0 0.0 0.0 17.38614676430189 3.372505457509977 3.372505457509977 32.07888436886592 0 0.6549471895720985 2.0 0.0 0.0 + + {[TV]|[{I|L}S]}[KG]V{M(Oxidation (M))|F}GV 3.9826 + + 128 + 1 2.087 56402.7 1.0 4184 4371 8547 SUDHL4_400M_050219_1,8557 SUDHL4_400M_050219_1,8557,SLGKVFGV False True SLGKVFGV 45.88342 403.742022693157 1501041.75 8547.0 ENST00000558825.5_1_15:91337395-91358506:+|nuORF;;ENSG00000197299|ENST00000355112|BLM -0.2264331181844075 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8558 45.888 242.0 149200.0 25 0 12332.0 -1 LPYKGCLRL 9 73 560.3220937269866 1118.6296345207732 2 560.3226806521416 MULTI CID FTMS 0 0 0 -1 0 11 Carbamidomethyl (C) _LPYKGC(Carbamidomethyl (C))LRL_ ENST00000493021.5_1_2:162567177-162757603:+|nuORF 2.059750862983233 0.8427793054688888 5 V 1 -1 9.6041 0.0 0.0 0.85856 0.0 0.0 1001.549951148506 0.0 1001.549951148506 0.0 9.604093769761874 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.85856 - 14 + 1 2.087 30881.5 1.0 4185 4371 8547 SUDHL4_400M_050219_1,8558 SUDHL4_400M_050219_1,8558,LPYKGCLRL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8559 45.891 127.0 469990.0 25 0 53156.0 + + 19489 TSWVPLVSR 9 94 522.295737143275 1042.57692135335 2 522.2957641482353 MULTI CID FTMS 0 0 0 8547 202463.140625 0.2113095764213335 8 -0.2953262329101562 12 Unmodified _LFKEVHGIT_ ENSG00000076513|ENST00000261739|ANKRD13A 7.910154910731844 0.6385446671287552 5 {M(Oxidation (M))|F} 1 -1 10.837 0.0 0.0 1.0395 0.0 0.0 877.4976194508093 0.0 877.4976194508093 0.0 0.0354740838230061 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0395 + + 82 + 1 2.087 53015.7 1.0 4186 4371 8547 SUDHL4_400M_050219_1,8559 SUDHL4_400M_050219_1,8559,LFKEVHGIT False False TSWVPLVSR 45.890572 522.295764148235 1064155.875 8547.0 ENSG00000076513|ENST00000261739|ANKRD13A 3.7096428871154794 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8560 45.894 153.0 478620.0 25 0 43856.0 + 33797 SLDKDIVAL 9 116 487.2833429870328 972.5521330408656 2 487.2840453982353 MULTI CID FTMS 0 0 0 8547 145647.90625 1.0 0 0.0 13 Unmodified _SLDKDIVAL_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 22.736283301280096 0.2418982879461534 5 {[TV]|[{I|L}S]}DRS{I|L}VA{I|L} 9 2 + 38.771 0.0 0.0 3.9865 3.9865 84.68 0.0 0.0 0.0 9.77723605288848 8.384767769392745 8.384767769392745 9.208187539523756 0 0.6989700043360187 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}DRS{I|L}VA{I|L};{[TV]|[{I|L}S]}D[VG]S{I|L}VA{I|L};{NN|[MP]|[D{I|L}]|[EV]}SRS{I|L}VA{I|L};{[TV]|[{I|L}S]}V[DG]S{I|L}VA{I|L};{[TV]|[{I|L}S]}VWWVA{I|L};{[TV]|[{I|L}S]}V{[MG]|[TS]}[PS]VA{I|L};{NN|[MP]|[D{I|L}]|[EV]}V[SG]S{I|L}VA{I|L};{NN|[MP]|[D{I|L}]|[EV]}S[VG]S{I|L}VA{I|L};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))R]{I|L}VA{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}S{I|L}VA{I|L} 3.9865;3.0397;2.9812;2.7302;2.6305;2.3498;2.3439;2.0344;1.8122;1.7851 -;-;-;-;-;-;-;-;-;- 451 1 2.087 61036.1 1.0 4187 4371 8547 SUDHL4_400M_050219_1,8560 SUDHL4_400M_050219_1,8560,SLDKDIVAL False True SLDKDIVAL 45.893605 487.284045398235 1168147.375 8547.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 1.7357492248217266 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8561 45.896 131.0 543340.0 25 0 172790.0 22838 LRRRSVRPGVV 11 70 647.9105489838066 0 647.9102661013603 PEAK CID FTMS 0 0 0 8547 123509.5390625 0.5261570167177739 -5 0.4513092041015625 14 Unmodified _LRRRSVRPGVV_ ENSG00000164236|ENST00000296657|ANKRD33B 1.3295316138638542 0.4761840153648598 5 W 1 11 5.4846 0.0 0.0 0.42391 0.0 0.0 682.4367463057007 422.2708843210066 1104.7076306267072 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.42391 - 20 + 1 2.087 63687.0 1.0 4188 4371 8547 SUDHL4_400M_050219_1,8561 SUDHL4_400M_050219_1,8561,LRRRSVRPGVV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8563 45.902 195.0 155090.0 25 0 47358.0 10270 FQVLTTRKRK 10 45 638.8953529258057 1275.7761529184113 2 638.8954955935478 MULTI CID FTMS 0 0 0 8562 104109.9453125 0.3549486917365009 1 -0.0201339721679687 1 Unmodified _FQVLTTRKRK_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 0.4007161486938917 0.7247829448918255 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.087 29818.5 1.0 4189 4372 8562 SUDHL4_400M_050219_1,8563 SUDHL4_400M_050219_1,8563,FQVLTTRKRK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8564 45.916 800.0 51115.0 25 0 6019.5 -1 0 58 962.4937974630216 0 962.4929687380792 PEAK CID FTMS 0 0 0 -1 0 2 5 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.28521 0.0 0.0 1400.768404396943 372.1222017877563 1772.8906061846992 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.28521 - 15 + 1 2.087 34832.8 0.5899999737739563 4190 4372 8562 SUDHL4_400M_050219_1,8564 SUDHL4_400M_050219_1,8564, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8567 45.928 266.0 327100.0 25 0 24445.0 + 12066 GQFGTINNF 9 128 499.2413817038049 996.4682104744098 2 499.2415954470634 MULTI CID FTMS 0 0 0 8566 178352.5 1.0 0 0.0 1 Unmodified _GQFGTINNF_ ENSG00000126581|ENST00000590099|BECN1 23.1484247019978 0.2366544122328345 5 NN{M(Oxidation (M))|F} 3 6 20.445 0.0 0.0 2.0518 0.0 0.0 603.3009263941349 0.0 603.3009263941349 0.0 9.186252728754988 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 + NN{M(Oxidation (M))|F} 2.0518 + + 165 + 1 2.087 70739.1 1.0 4191 4374 8566 SUDHL4_400M_050219_1,8567 SUDHL4_400M_050219_1,8567,GQFGTINNF False True GQFGTINNF 45.927534 499.241595447063 1223159.75 8566.0 ENSG00000126581|ENST00000590099|BECN1 3.73420250415802 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8568 45.934 383.0 495940.0 25 0 133500.0 20758 LLSVVPVPEG 10 146 505.3001765225853 1008.5858001119706 2 505.3010131716728 MULTI CID FTMS 0 0 0 8566 267189.78125 0.0886152145075154 -5 0.2494354248046875 2 Unmodified _LLSVVPVPEG_ ENSG00000101220|ENST00000379772|ADISSP;nc|ENSG00000101220|Q9GZN8-2|ADISSP 25.399314129420983 0.3980215340001851 5 {I|L}{I|L}SAE{I|L}P 7 6 46.22 0.0 0.0 4.5826 0.0 0.0 0.0 282.14247670792685 282.14247670792685 10.513910938248811 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.4749073637206092 0.0 {I|L}{I|L}SAE{I|L}P 4.5826 - 1294 1 2.087 144526.0 1.0 4192 4374 8566 SUDHL4_400M_050219_1,8568 SUDHL4_400M_050219_1,8568,LLSVVPVPEG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8569 45.942 414.0 355430.0 25 0 25893.0 + 9434 FLAKLIAQA 9 168 487.8050700547528 973.5955871763056 2 487.8056213259697 MULTI CID FTMS 0 0 0 8566 123157.015625 0.4354722723235058 -4 0.1375885009765625 3 Unmodified _FLAKLIAQA_ ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 71.13359017698441 0.0206607516130725 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AK{I|L}{I|L}AQA 9 0 + 34.558 0.0 0.0 3.5495 3.5495 73.891 0.0 0.0 0.0 0.5348954881332091 6.567270949552086 0.5348954881332091 0.5348954881332091 0 1.3460089819408498 0.0 0.3807196863200844 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AK{I|L}{I|L}AQA;[{I|L}A]K{I|L}{M(Oxidation (M))|F}{I|L}AQA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AK{I|L}A{I|L}QA;[KA]{I|L}{I|L}{M(Oxidation (M))|F}{I|L}AQA;[{I|L}A]K{I|L}{M(Oxidation (M))|F}A{I|L}QA;[{I|L}A]K{I|L}A{M(Oxidation (M))|F}{I|L}QA;[KA]{I|L}{I|L}{M(Oxidation (M))|F}A{I|L}QA;[{I|L}A]K{I|L}{I|L}{M(Oxidation (M))|F}AQA;[{I|L}A]K{M(Oxidation (M))|F}{I|L}{I|L}AQA;[KA]{I|L}{I|L}A{M(Oxidation (M))|F}{I|L}QA 3.5495;3.4945;3.175;3.1625;3.1201;2.8109;2.788;2.6953;2.567;2.4788 +;-;-;-;-;-;-;-;-;- + 1243 1 2.087 112503.6 1.0 4193 4374 8566 SUDHL4_400M_050219_1,8569 SUDHL4_400M_050219_1,8569,FLAKLIAQA True True FLAKLIAQA 45.941782 487.80562132597 4022545.5 8566.0 ENST00000484403.5_1_21:30439206-30445917:-|nuORF;;nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 5.305611292521159 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8570 45.956 800.0 175950.0 25 0 32047.0 + 38532 TSRRLVLLEGR 11 115 650.3960463391597 1298.7775397451194 2 650.3950683474541 MULTI CID FTMS 0 0 0 8566 107322.75 0.2345192152865156 -5 0.2494354248046875 4 Unmodified _TSRRLVLLEGR_ REV__ENST00000479298.5_1_X:100878865-100879887:+|nuORF 1.1933415558491238 0.8695176722560516 5 {I|L} 1 -1 10.379 0.0 0.0 0.79911 0.0 0.0 1167.6822618904305 0.0 1167.6822618904305 0.0 6.883753548010496 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.79911 + + 71 + 1 2.087 120216.6 0.7599999904632568 4194 4374 8566 SUDHL4_400M_050219_1,8570 SUDHL4_400M_050219_1,8570,TSRRLVLLEGR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8571 45.969 800.0 175720.0 25 0 15522.0 + 34449 SLYFGENRL 9 146 549.781826985342 1097.549101037484 2 549.7811767458916 MULTI CID FTMS 0 0 0 8566 103115.234375 1.0 0 0.0 5 Unmodified _SLYFGENRL_ ENSG00000105819|ENST00000249269|PMPCB;ENST00000444457.5_1_7:102938385-102969496:+|nuORF;ENST00000498530.5_1_7:102937906-102949569:+|nuORF 31.26834338654808 0.1333407332142048 5 {[TV]|[{I|L}S]}Y{M(Oxidation (M))|F}GE[RN]{I|L} 9 0 + 58.382 0.0 0.0 5.3193 5.3193 86.563 0.0 0.0 0.0 43.23908740944319 11.470996953088388 11.470996953088388 8.78022170376731 0 0.8494850021680094 1.6989700043360187 0.0 1.0044321917401078 + + {[TV]|[{I|L}S]}Y{M(Oxidation (M))|F}GE[RN]{I|L};{[TV]|[{I|L}S]}YW{M(Oxidation (M))|F}[RN]{I|L};{[TV]|[{I|L}S]}Y{I|L}{M(Oxidation (M))|F}[MD]P{I|L};{[TV]|[{I|L}S]}Y{M(Oxidation (M))|F}{I|L}[MD]P{I|L};{[TV]|[{I|L}S]}Y{I|L}{M(Oxidation (M))|F}[MD]{I|L}P;{[TV]|[{I|L}S]}Y{M(Oxidation (M))|F}{I|L}[MD]{I|L}P;{[TV]|[{I|L}S]}{I|L}Y{M(Oxidation (M))|F}[MD]P{I|L};{[TV]|[{I|L}S]}{I|L}Y{M(Oxidation (M))|F}[MD]{I|L}P;{[TV]|[{I|L}S]}Y{[DA]|[EG]}[RN]{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}V[YQ][HN]P{I|L} 5.3193;4.5193;4.2623;4.2182;4.174;4.1299;3.7875;3.6992;2.6897;1.7246 +;-;-;-;-;-;-;-;-;- + 348 + 1 2.087 110935.7 0.6899999976158142 4195 4374 8566 SUDHL4_400M_050219_1,8571 SUDHL4_400M_050219_1,8571,SLYFGENRL False True SLYFGENRL 45.969457 549.781176745892 660586.9375 8566.0 ENST00000498530.5_1_7:102937906-102949569:+|nuORF;;ENST00000444457.5_1_7:102938385-102969496:+|nuORF;;ENSG00000105819|ENST00000249269|PMPCB 5.107807954152425 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8573 45.98 376.0 520060.0 25 0 64742.0 5248 DKFLKEQIK 9 133 574.8365232565209 1147.6584935798417 2 574.8362914919853 MULTI CID FTMS 0 0 0 8572 375123.59375 0.6470613633597381 6 -0.4277496337890625 1 Unmodified _DKFLKEQIK_ ENSG00000138385|ENST00000260956|SSB;ENST00000461708.1_1_2:170655414-170662397:+|nuORF 7.289230182591677 0.6602208344931196 5 V[YV]NVD 6 9 1.9665 0.0 0.0 0.17135 0.0 0.0 0.0 455.2502230279906 455.2502230279906 1.253121513791139 0.0 0.0 0.0 0 0.1331596456423734 0.0 0.0 0.0 V[YV]NVD 0.17135 - 8 + 1 2.078 145437.1 1.0 4196 4375 8572 SUDHL4_400M_050219_1,8573 SUDHL4_400M_050219_1,8573,DKFLKEQIK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8574 45.983 126.0 863230.0 25 0 155130.0 -1 FFIPQLIMIK 10 87 633.3695789979172 1264.7246050626345 2 633.3701049685478 MULTI CID FTMS 0 0 0 8572 405401.4375 0.3235212437248902 -5 0.1869697570800781 2 Oxidation (M) _FFIPQLIM(Oxidation (M))IK_ ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57-2|DNAH3;nc|ENSG00000158486|Q8TD57-3|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3 1.6526216038709556 0.7189921496796233 5 D 1 -1 11.237 0.0 0.0 0.8885 0.0 0.0 686.3610550036127 460.3077743417393 1146.668829345352 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D 0.8885 - 5 + 1 2.078 86339.4 1.0 4197 4375 8572 SUDHL4_400M_050219_1,8574 SUDHL4_400M_050219_1,8574,FFIPQLIMIK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8575 45.991 449.0 157490.0 25 0 13668.0 33908 SLFSRRKRS 9 97 568.8352515693626 1135.6559502055252 2 568.8353759646416 MULTI CID FTMS 0 0 0 8572 365295.0 0.4531947222500501 -4 0.1117324829101562 3 Unmodified _SLFSRRKRS_ ENST00000335020.2_1_6:116360191-116360374:+|nuORF 4.3292370932331545 0.7635526921153418 5 [Y{I|L}]N 3 8 12.932 0.0 0.0 1.1387 0.0 0.0 0.0 742.4438279733564 742.4438279733564 3.979400086720375 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [Y{I|L}]N 1.1387 - 36 1 2.078 56224.2 1.0 4198 4375 8572 SUDHL4_400M_050219_1,8575 SUDHL4_400M_050219_1,8575,SLFSRRKRS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8576 46.005 800.0 214590.0 25 0 40537.0 36982 TFILIAVCKFK 11 147 641.8822412905197 1281.7499296478393 2 641.8825561404228 MULTI CID FTMS 0 0 0 8572 294101.9375 0.4194269444205023 -4 0.1117324829101562 4 Unmodified _TFILIAVCKFK_ ENSG00000164325|ENST00000296776|TMEM174;nc|ENSG00000164325|Q8WUU8-2|TMEM174 2.9952420565917617 0.861016188266951 5 H 1 11 9.1487 0.0 0.0 0.71377 0.0 0.0 1126.6827890001814 0.0 1126.6827890001814 0.0 0.0579093627490756 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.71377 - 47 + 1 2.078 135214.5 0.9300000071525574 4199 4375 8572 SUDHL4_400M_050219_1,8576 SUDHL4_400M_050219_1,8576,TFILIAVCKFK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8577 46.015 580.0 305680.0 25 0 25791.0 + 1558 ALLDQALSNA 10 199 508.27440540101225 1014.5342578688244 2 508.2756835818291 MULTI CID FTMS 0 0 0 8572 168987.875 1.0 0 0.0 5 Unmodified _ALLDQALSNA_ ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1 56.17704186161178 0.0466144807663799 5 [{I|L}A]DQ{I|L}A 6 4 38.166 0.0 0.0 3.7619 0.0 0.0 0.0 400.1822635707992 400.1822635707992 8.322646798160562 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.6307196863200843 0.5994850021680094 [{I|L}A]DQ{I|L}A 3.7619 - 1575 1 2.078 134370.4 1.0 4200 4375 8572 SUDHL4_400M_050219_1,8577 SUDHL4_400M_050219_1,8577,ALLDQALSNA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8578 46.021 370.0 275210.0 25 0 41862.0 4276 DAQRQILWAP 10 100 399.885293880905 1196.634052242915 3 399.8854553103447 MULTI CID FTMS 0 0 0 8572 170822.875 0.2611055049600823 6 -0.4277496337890625 6 Unmodified _DAQRQILWAP_ ENST00000467098.1_1_6:31647044-31651801:-|nuORF;ENST00000474395.5_1_6:31647044-31649224:-|nuORF 21.59015148037692 0.4836074274810599 5 [DV]{[SA]|[TG]}{I|L}KE 7 8 48.971 0.0 0.0 4.0924 0.0 0.0 0.0 451.2158297174438 451.2158297174438 38.51296975161809 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.6747425010840047 1.274227503252014 [DV]{[SA]|[TG]}{I|L}KE 4.0924 - 140 + 1 2.078 83440.8 1.0 4201 4375 8572 SUDHL4_400M_050219_1,8578 SUDHL4_400M_050219_1,8578,DAQRQILWAP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8579 46.035 800.0 197460.0 25 0 16256.0 + 27879 PLSIGMIKQLR 11 143 628.3820851561292 1254.7496173790582 2 628.3831054568291 MULTI CID FTMS 0 0 0 8572 160556.59375 0.2058713808699744 8 -0.4633140563964844 7 Unmodified _PLSIGMIKQLR_ REV__ENSG00000166391|ENST00000198801|MOGAT2;REV__nc|ENSG00000166391|Q3SYC2-2|MOGAT2 9.38312468134398 0.8308777417566128 5 [{I|L}P]S 3 -1 20.022 0.0 0.0 1.5957 0.0 0.0 0.0 954.5569958793112 954.5569958793112 2.49690490163427 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.2742275032520141 0.0 [{I|L}P]S 1.5957 + + 248 1 2.078 116689.7 0.6499999761581421 4202 4375 8572 SUDHL4_400M_050219_1,8579 SUDHL4_400M_050219_1,8579,PLSIGMIKQLR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8580 46.049 800.0 330180.0 25 0 19843.0 -1 PHRKKKPF 8 216 360.553652649946 1078.639128550038 3 360.5536987185478 MULTI CID FTMS 0 0 0 8572 96329.3984375 0.2455143547338842 -10 0.6114158630371094 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PHRKKKPF_ ENSG00000135521|ENST00000367576|LTV1 6.2057823575117 0.7866635192979977 5 {M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{I|L}{M(Oxidation (M))|F}VR 8 -1 + 37.049 0.0 0.0 3.4348 3.4348 79.932 0.0 0.0 0.0 25.455481485893543 6.286531417686092 6.286531417686092 6.532125137753432 0 0.9247425010840048 0.0 0.0 0.0 {M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{I|L}{M(Oxidation (M))|F}VR;{M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}{I|L}VR;{M(Oxidation (M))|F}{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}R[{I|L}V];{M(Oxidation (M))|F}{[RE]|[WV]}{M(Oxidation (M))|F}{I|L}{I|L}VR;{M(Oxidation (M))|F}{[RE]|[WV]}{M(Oxidation (M))|F}{I|L}R[{I|L}V] 3.4348;2.8292;2.1648;1.8773;1.2128 -;-;-;-;- 119 + 1 2.078 212240.2 0.7900000214576721 4203 4375 8572 SUDHL4_400M_050219_1,8580 SUDHL4_400M_050219_1,8580,PHRKKKPF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8581 46.052 83.0 493250.0 25 0 52625.0 + 16251 IVRERQSL 8 77 500.798345217661 999.582137502122 2 501.2994262576103 MULTI CID FTMS 0 0 0 8572 115209.1484375 0.8863435342257612 -2 0.0532646179199218 9 Unmodified _IVRERQSL_ REV__ENST00000264956.10_2_4:5815433-5815706:+|nuORF 10.183394434864962 0.7604730176254005 5 [{I|L}V]{M(Oxidation (M))|F} 3 -1 24.437 0.0 0.0 2.4447 0.0 0.0 0.0 637.3735858265939 637.3735858265939 9.42008053022313 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]{M(Oxidation (M))|F} 2.4447 - 29 1 2.078 37807.4 1.0 4204 4375 8572 SUDHL4_400M_050219_1,8581 SUDHL4_400M_050219_1,8581,IVRERQSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8583 46.057 12.0 3294600.0 25 0 573010.0 + 11744 GLIEKNIEL 9 72 514.8029752077183 1027.5913974822363 2 514.8033935427666 MULTI CID FTMS 0 0 0 8582 3077106.0 0.575205855195746 1 -0.0145950317382812 1 Unmodified _GLIEKNIEL_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 60.07390631473393 0.0260411565414776 5 {[VA]|[{I|L}G]}SN{I|L}{I|L}G{I|L}E{I|L} 10 5 + 71.335 0.0 0.0 6.9419 6.9419 91.658 0.0 0.0 0.0 2.568846541166608 46.897737521010825 2.568846541166608 9.164539485499256 0 0.6989700043360187 2.0 1.024227503252014 0.0 {[VA]|[{I|L}G]}SN{I|L}{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}SGG{I|L}{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}GEK{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}{I|L}[NS]{I|L}G{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NK{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}G[SG]{I|L}{I|L}G{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}GGK{I|L}G{I|L}E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N{I|L}{I|L}G{I|L}E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GG{I|L}{I|L}G{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EK{I|L}G{I|L}E{I|L} 6.9419;6.0501;6.024;5.5566;5.5045;5.4251;4.6084;4.4109;3.5148;3.493 -;-;-;-;-;-;-;-;-;- 477 1 2.073 37749.4 1.0 4205 4376 8582 SUDHL4_400M_050219_1,8583 SUDHL4_400M_050219_1,8583,GLIEKNIEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8584 46.058 37.0 1046900.0 25 0 176810.0 -1 LQKKYLRMV 9 64 597.8565151449595 1193.698477356719 2 597.8568603396416 MULTI CID FTMS 0 0 0 8582 669565.125 0.3730244977907969 5 -0.3452606201171875 2 Oxidation (M) _LQKKYLRM(Oxidation (M))V_ ENSG00000143452|ENST00000361824|HORMAD1;nc|ENSG00000143452|Q86X24-3|HORMAD1;nc|ENSG00000143452|Q86X24-4|HORMAD1 0.5247636613948944 0.8963649302248013 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.073 35619.8 1.0 4206 4376 8582 SUDHL4_400M_050219_1,8584 SUDHL4_400M_050219_1,8584,LQKKYLRMV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8585 46.059 41.0 966810.0 25 0 147720.0 20735 LLSLIHLV 8 60 454.3022934028788 906.5900338725576 2 454.3024780154228 MULTI CID FTMS 0 0 0 8582 839981.25 0.1341357143592852 -4 0.1558876037597656 3 Unmodified _LLSLIHLV_ ENSG00000180658|ENST00000315453|OR2A4;ENSG00000243896|ENST00000641841|OR2A7 20.871210003555333 0.6025813472596342 5 [VP]KRPV 6 7 42.612 0.0 0.0 4.7003 0.0 0.0 0.0 227.13650404630403 227.13650404630403 24.65350013324773 0.0 0.0 0.0 0 0.9247425010840048 1.0969100130080565 0.0 0.0 [VP]KRPV 4.7003 - 103 1 2.073 35863.1 1.0 4207 4376 8582 SUDHL4_400M_050219_1,8585 SUDHL4_400M_050219_1,8585,LLSLIHLV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8586 46.061 71.0 598670.0 25 0 140500.0 + 17426 KMYEEFLSKV 10 71 637.3290684428694 1272.6435839525386 2 637.3290893435478 MULTI CID FTMS 0 0 0 8582 460652.65625 0.7780472629528911 -2 0.1318702697753906 4 Unmodified _KMYEEFLSKV_ ENSG00000108946|ENST00000589228|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;nc|ENSG00000108946|P10644-2|PRKAR1A 26.345799442569017 0.3767554976935894 5 KMYE[{M(Oxidation (M))|F}E]{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]} 10 0 + 64.09 0.0 0.0 5.036 5.036 91.121 0.0 0.0 0.0 37.17925002484726 8.379231027444405 8.379231027444405 59.30691207165545 0 2.305462187404089 0.0 0.3807196863200844 0.2614393726401688 + + KMYE[{M(Oxidation (M))|F}E]{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]};[YE]RR[{M(Oxidation (M))|F}V]Y[Q{I|L}] 5.036;0.37588 +;- + 219 + 1 2.073 39078.1 1.0 4208 4376 8582 SUDHL4_400M_050219_1,8586 SUDHL4_400M_050219_1,8586,KMYEEFLSKV False True KMYEEFLSKV 46.060781 637.329089343548 3708507.5 8582.0 ENSG00000188191|ENST00000537384|PRKAR1B;;ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 3.5271126429239907 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8587 46.063 95.0 525000.0 25 0 58954.0 + 44072 YITERIIAV 9 79 539.3187698844209 1076.6229868356418 2 539.3192626833916 MULTI CID FTMS 0 0 0 8582 267766.03125 0.641875942427295 -2 0.1318702697753906 5 Unmodified _YITERIIAV_ ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3;nc|ENSG00000136205|Q68CZ2-3|TNS3;nc|ENSG00000136205|Q68CZ2-4|TNS3 19.256988751693697 0.3154191944385105 5 {[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}K{I|L}{I|L}[{I|L}P] 9 6 + 21.285 0.0 0.0 1.977 1.977 74.688 0.0 0.0 0.0 0.0872961080489957 9.06669619476937 0.0872961080489957 3.0102999566398125 0 0.5 0.958607314841775 0.0 0.0 {[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}K{I|L}{I|L}[{I|L}P];{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}K{I|L}[{I|L}P] 1.977;1.6974 -;- 82 1 2.073 45082.6 1.0 4209 4376 8582 SUDHL4_400M_050219_1,8587 SUDHL4_400M_050219_1,8587,YITERIIAV False True YITERIIAV 46.062862 539.319262683392 2573697.25 8582.0 nc|ENSG00000136205|Q68CZ2-2|TNS3;;nc|ENSG00000136205|Q68CZ2-3|TNS3;;nc|ENSG00000136205|Q68CZ2-4|TNS3;;ENSG00000136205|ENST00000311160|TNS3 0.7915460268656412 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8588 46.065 109.0 365290.0 25 0 51223.0 19957 LIFIFMLS 8 83 492.2856774529552 982.5568019727104 2 492.2841674685478 MULTI CID FTMS 0 0 0 8582 187027.765625 0.8737506118923104 -1 0.082489013671875 6 Unmodified _LIFIFMLS_ ENST00000558159.1_1_15:44958153-44958801:-|nuORF 5.760428011301431 0.7893668129297577 5 V 1 8 9.6041 0.0 0.0 0.97746 0.0 0.0 865.4773779998573 0.0 865.4773779998573 0.0 4.119543704721593 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.97746 - 10 + 1 2.073 33808.3 1.0 4210 4376 8582 SUDHL4_400M_050219_1,8588 SUDHL4_400M_050219_1,8588,LIFIFMLS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8589 46.067 54.0 755070.0 25 0 48277.0 + 44180 YLEPYLKEV 9 74 577.3084894098338 1152.6024258864677 2 577.3111450076103 MULTI CID FTMS 0 0 0 8582 160626.5625 1.0 0 0.0 7 Unmodified _YLEPYLKEV_ ENSG00000156467|ENST00000287022|UQCRB;ENST00000518876.1_1_8:97243285-97244208:-|nuORF;ENST00000521036.5_1_8:97243285-97243480:-|nuORF 9.38312468134398 0.5871240394367778 5 [Y{I|L}][{M(Oxidation (M))|F}V][KP]N{[WS]|[C(Carbamidomethyl (C)){I|L}]} 9 7 + 24.427 0.0 0.0 2.1193 2.1193 78.749 0.0 0.0 0.0 12.420299789533404 3.881127850452234 3.881127850452234 7.7815125038364386 0 0.3054621874040891 2.0 0.0 0.0 [Y{I|L}][{M(Oxidation (M))|F}V][KP]N{[WS]|[C(Carbamidomethyl (C)){I|L}]};[Y{I|L}]{[SA]|[TG]}[WK]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]} 2.1193;1.4442 -;- 60 1 2.073 36985.9 1.0 4211 4376 8582 SUDHL4_400M_050219_1,8589 SUDHL4_400M_050219_1,8589,YLEPYLKEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8591 46.073 191.0 454250.0 25 0 31611.0 + 18211 KVFDPVPVGV 10 111 528.807668127944 1055.600783322688 2 528.8084594607353 MULTI CID FTMS 0 0 0 8590 352871.40625 0.3962891140321256 3 -0.1873130798339843 1 Unmodified _KVFDPVPVGV_ ENSG00000135829|ENST00000367549|DHX9;ENST00000490519.1_1_1:182845328-182845691:+|nuORF 47.594388314883695 0.0942698883389255 5 [VP]D{M(Oxidation (M))|F}KVVPGV 10 5 + 69.391 0.0 0.0 6.5736 6.5736 93.286 0.0 0.0 0.0 13.168823333608408 15.026975159433531 13.168823333608408 13.168823333608408 0 1.1989700043360187 1.3979400086720375 0.5796896906561032 0.0 [VP]D{M(Oxidation (M))|F}KVVPGV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}DPVVPGV;[VP]KV{M(Oxidation (M))|F}DVPGV;[VP]K{M(Oxidation (M))|F}[{I|L}T]VPGV;{I|L}{I|L}[EC]KVVPGV;[VP]KT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VPGV;[DP]V{M(Oxidation (M))|F}KVVPGV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[{I|L}T]PVVPGV;[YT][KP]PVVPGV;{[TV]|[{I|L}S]}AVDTVPVR 6.5736;5.326;4.6577;4.5375;4.4487;4.1339;3.9967;3.952;3.8694;3.7323 -;-;-;-;-;-;-;-;-;- 1483 1 2.073 75684.5 1.0 4212 4377 8590 SUDHL4_400M_050219_1,8591 SUDHL4_400M_050219_1,8591,KVFDPVPVGV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8592 46.087 800.0 232300.0 25 0 25600.0 + 16991 KIWERIWSA 9 161 594.830154841655 1187.64575675011 2 594.8302490115166 MULTI CID FTMS 0 0 0 8590 178740.625 0.3052877001780902 3 -0.1873130798339843 2 Unmodified _KIWERIWSA_ ENST00000532383.5_1_11:10825070-10825157:-|nuORF 57.2037768669896 0.0276302343558183 5 K{I|L}ADER{I|L}W 8 4 79.136 0.0 0.0 6.6633 0.0 0.0 0.0 173.05721460513908 173.05721460513908 56.963207030424094 0.0 0.0 0.0 0 2.048455006504028 1.2218487496163564 1.055462187404089 0.4247425010840047 K{I|L}ADER{I|L}W 6.6633 - 735 + 1 2.073 137232.5 0.7400000095367432 4213 4377 8590 SUDHL4_400M_050219_1,8592 SUDHL4_400M_050219_1,8592,KIWERIWSA True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8594 46.091 43.0 320130.0 25 0 27061.0 + 17975 KRLPRKVEW 9 38 606.3700543584731 1210.725555783746 2 606.3701049685478 MULTI CID FTMS 0 0 0 8593 391204.34375 0.4426959097903937 3 -0.3110160827636719 1 Unmodified _KRLPRKVEW_ REV__ENSG00000141639|ENST00000400384|MAPK4 0.5247636613948944 0.8963649302248013 5 G 1 -1 0.27759 0.0 0.0 0.022927 0.0 0.0 1023.9392989251508 126.74608789615468 1150.6853868213057 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.022927 - 2 + 1 2.073 19943.7 1.0 4214 4378 8593 SUDHL4_400M_050219_1,8594 SUDHL4_400M_050219_1,8594,KRLPRKVEW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8595 46.093 63.0 917370.0 25 0 162360.0 7656 EKIKEIGDR 9 75 544.3092768409791 1086.6040007487582 2 544.3093749880791 MULTI CID FTMS 0 0 0 8593 758118.4375 0.9163330797594396 -1 0.0196495056152343 2 Unmodified _EKIKEIGDR_ ENSG00000105538|ENST00000222145|RASIP1 3.5964929083625545 0.7891324200061827 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 10 1 2.073 47667.2 1.0 4215 4378 8593 SUDHL4_400M_050219_1,8595 SUDHL4_400M_050219_1,8595,EKIKEIGDR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8596 46.095 91.0 711320.0 25 0 59770.0 + 15010 ILSKDGVLYV 10 98 553.8266483263043 1105.6387437194085 2 553.8264037966728 MULTI CID FTMS 0 0 0 8593 439465.53125 0.4978789274767454 3 -0.3110160827636719 3 Unmodified _ILSKDGVLYV_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87398353-87423749:+|nuORF 17.11289562659939 0.5604042439455784 5 {I|L}{I|L}[SG][QT]{I|L}{I|L}[YV] 10 4 + 34.383 0.0 0.0 3.1098 3.1098 74.974 0.0 0.0 0.0 8.202847949567197 7.269987279362624 7.269987279362624 1.8752072083646285 0 1.0 2.0 0.0 0.0 {I|L}{I|L}[SG][QT]{I|L}{I|L}[YV];{I|L}{I|L}[SG]AAS{I|L}{I|L}[YV];{[VA]|[{I|L}G]}DVKS{I|L}{I|L}[YV];{[VA]|[{I|L}G]}[C(Carbamidomethyl (C))R]{I|L}{I|L}{I|L}[YV];[VS][TP]KS{I|L}{I|L}[YV];{[VA]|[{I|L}G]}{[TV]|[{I|L}S]}[QT]{I|L}{I|L}[YV];{[VA]|[{I|L}G]}{[TV]|[{I|L}S]}AAS{I|L}{I|L}[YV];{[VA]|[{I|L}G]}[VG][VS]S{I|L}{I|L}[YV];[VS][{I|L}A][QT]{I|L}{I|L}[YV];[VS][{I|L}A]AAS{I|L}{I|L}[YV] 3.1098;2.9402;2.3679;1.4888;1.0764;0.98875;0.81915;0.81915;0.41712;0.24751 -;-;-;-;-;-;-;-;-;- 208 1 2.073 54713.7 1.0 4216 4378 8593 SUDHL4_400M_050219_1,8596 SUDHL4_400M_050219_1,8596,ILSKDGVLYV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8597 46.098 157.0 478110.0 25 0 62369.0 + 42926 VVRHLTVL 8 74 468.8034116730544 935.5922704129088 2 468.8031799197197 MULTI CID FTMS 0 0 0 8593 264872.6875 0.5662866491077968 -1 0.0196495056152343 4 Unmodified _VVRHLTVL_ REV__ENSG00000158246|ENST00000289166|TENT5B 14.581692164780916 0.6954967302934248 5 {I|L}VV{I|L} 4 -1 21.88 0.0 0.0 2.3387 0.0 0.0 493.2769792570483 0.0 493.2769792570483 0.0 9.890690719683093 0.0 0.0 0 0.5682503180159344 0.0 0.0 0.0 {I|L}VV{I|L} 2.3387 - 36 1 2.073 64361.5 1.0 4217 4378 8593 SUDHL4_400M_050219_1,8597 SUDHL4_400M_050219_1,8597,VVRHLTVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8598 46.1 107.0 643390.0 25 0 50676.0 + 1791 ALSFIRDEV 9 89 525.2849400762144 0 525.2852050662041 PEAK CID FTMS 0 0 0 8593 242840.171875 0.7706292894219233 14 -0.6036300659179688 5 Unmodified _ALSFIRDEV_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 34.40172386719151 0.0892392376003579 5 S{M(Oxidation (M))|F}{I|L} 3 6 26.753 0.0 0.0 2.5514 0.0 0.0 184.1191433250281 514.2277926080686 698.3469359330968 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.3252574989159953 0.0 + S{M(Oxidation (M))|F}{I|L} 2.5514 + + 67 + 1 2.073 58442.8 1.0 4218 4378 8593 SUDHL4_400M_050219_1,8598 SUDHL4_400M_050219_1,8598,ALSFIRDEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8599 46.102 85.0 552630.0 25 0 45476.0 + 40683 VLFGVETHV 9 83 500.7763996318704 999.5382463305408 2 500.7768127322197 MULTI CID FTMS 0 0 0 8593 232659.515625 0.8835414383425494 -1 0.0196495056152343 6 Unmodified _VLFGVETHV_ ENSG00000066583|ENST00000173527|ISOC1 26.88365393820708 0.1891292719743517 5 [{I|L}V]{M(Oxidation (M))|F}GVET[HV] 9 0 + 55.34 0.0 0.0 5.5365 5.5365 90.144 0.0 0.0 0.0 43.74606867853579 5.642492736872597 5.642492736872597 10.969100130080562 0 0.4247425010840047 2.0 0.0 0.0 + + [{I|L}V]{M(Oxidation (M))|F}GVET[HV];[{I|L}V]{M(Oxidation (M))|F}GVE[HS]{I|L} 5.5365;4.4391 +;- + 98 + 1 2.073 43586.3 1.0 4219 4378 8593 SUDHL4_400M_050219_1,8599 SUDHL4_400M_050219_1,8599,VLFGVETHV False True VLFGVETHV 46.101802 500.77681273222 1338197.125 8593.0 ENSG00000066583|ENST00000173527|ISOC1 7.997097651163737 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8600 46.105 146.0 437500.0 25 0 128950.0 40775 VLLEQKLS 8 76 465.2871404504061 928.5597279676124 2 465.2870361208916 MULTI CID FTMS 0 0 0 8593 174521.1875 0.2788157878445483 -2 0.0342445373535156 7 Unmodified _VLLEQKLS_ ENSG00000058085|ENST00000264144|LAMC2 11.640296217721598 0.738950129755968 5 {I|L} 1 7 10.485 0.0 0.0 1.1291 0.0 0.0 797.4640228668295 0.0 797.4640228668295 0.0 -1.399699876253779 -1.399699876253779 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1291 + + 37 + 1 2.073 54365.6 1.0 4220 4378 8593 SUDHL4_400M_050219_1,8600 SUDHL4_400M_050219_1,8600,VLLEQKLS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8601 46.119 800.0 179020.0 25 0 9155.3 -1 0 136 764.3619406530038 2290.063992559212 3 764.6967040896416 MULTI CID FTMS 0 0 0 8593 150053.515625 0.6828211216527479 -1 0.0196495056152343 8 5 [MN]PN{I|L}NW 7 -1 62.281 0.0 0.0 2.7196 0.0 0.0 0.0 1417.669464876078 1417.669464876078 38.61725051565783 0.0 0.0 0.0 0 0.6307196863200843 1.6989700043360187 0.0 0.4247425010840047 [MN]PN{I|L}NW 2.7196 - 922 + 1 2.073 107397.7 0.8299999833106995 4221 4378 8593 SUDHL4_400M_050219_1,8601 SUDHL4_400M_050219_1,8601, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8602 46.126 396.0 160480.0 25 0 12099.0 + 5728 DPLTAKFVT 9 102 496.2766331722281 990.5387134112564 2 496.2763244509697 MULTI CID FTMS 0 0 0 8593 93365.7109375 1.0 0 0.0 9 Unmodified _DPLTAKFVT_ REV__ENSG00000173193|ENST00000474629|PARP14;REV__nc|ENSG00000173193|Q460N5-1|PARP14;REV__nc|ENSG00000173193|Q460N5-3|PARP14;REV__nc|ENSG00000173193|Q460N5-4|PARP14 14.838274106304384 0.4350285940865338 5 {[TV]|[{I|L}S]}PD 4 -1 40.445 0.0 0.0 4.0832 0.0 0.0 0.0 575.3205655221157 575.3205655221157 21.985289460651984 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}PD 4.0832 - 271 + 1 2.073 54977.3 1.0 4222 4378 8593 SUDHL4_400M_050219_1,8602 SUDHL4_400M_050219_1,8602,DPLTAKFVT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8603 46.139 800.0 160440.0 25 0 10555.0 -1 RMWRVRWRYCQ 11 139 848.9251763477502 1695.8357997623002 2 849.4272338747978 MULTI CID FTMS 0 0 0 8593 115277.5546875 0.956955841194456 -1 0.0196495056152343 10 Carbamidomethyl (C) _RMWRVRWRYC(Carbamidomethyl (C))Q_ ENSG00000184345|ENST00000333127|IQCF2 1.3295316138638542 0.8688751186870782 5 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAN[KG]{I|L}EG{[QS]|[NT]}Q 16 -1 + 90.924 0.0 0.0 5.3616 5.3616 83.228 0.0 0.0 0.0 24.59911824299012 12.50875204282059 12.50875204282059 3.856355030044924 0 1.2059771852360797 2.0 0.9876954943324544 0.6237125054200234 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAN[KG]{I|L}EG{[QS]|[NT]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAN[KG]E{I|L}G{[QS]|[NT]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAN[K{I|L}]GEG{[QS]|[NT]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAN[WQ]{I|L}G{[QS]|[NT]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAN[K{I|L}]WG{[QS]|[NT]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NANE{[QG]|[NA]}{I|L}G{[QS]|[NT]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAN{[NV]|[RG]}T{I|L}G{[QS]|[NT]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAN[KG]Y[HT]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAN[KG]{I|L}EGP[{M(Oxidation (M))|F}V];{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAN[KG]E{I|L}GP[{M(Oxidation (M))|F}V] 5.3616;5.1342;4.978;4.9447;4.7671;4.7506;4.7262;4.5502;4.4906;4.2632 -;-;-;-;-;-;-;-;-;- 5205 + 1 2.073 88833.3 0.7799999713897705 4223 4378 8593 SUDHL4_400M_050219_1,8603 SUDHL4_400M_050219_1,8603,RMWRVRWRYCQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8604 46.153 800.0 108090.0 25 0 7442.6 -1 0 94 769.0330278494184 2304.077254148456 3 769.3669311404228 MULTI CID FTMS 0 0 0 8593 113568.171875 1.0 0 0.0 11 5 [MN]PN{I|L}[HD]Q{I|L}[YG]D 12 -1 55.433 0.0 0.0 2.4059 0.0 0.0 0.0 903.4545382135374 903.4545382135374 32.752741339376726 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.3054621874040891 0.4247425010840047 [MN]PN{I|L}[HD]Q{I|L}[YG]D 2.4059 - 698 + 1 2.073 69506.4 0.7599999904632568 4224 4378 8593 SUDHL4_400M_050219_1,8604 SUDHL4_400M_050219_1,8604, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8606 46.158 35.0 1439900.0 25 0 340520.0 42066 VQVRCIFITV 10 67 589.3429083257357 1176.6712637182711 2 589.3432494997978 MULTI CID FTMS 0 0 0 8605 1620737.375 0.4655127275244389 8 -0.3653182983398437 1 Unmodified _VQVRCIFITV_ ENST00000357085.4_2_6:25966634-25966742:+|nuORF 1.4819007175156935 0.719781833666733 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.073 46165.8 1.0 4225 4379 8605 SUDHL4_400M_050219_1,8606 SUDHL4_400M_050219_1,8606,VQVRCIFITV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8607 46.16 101.0 833190.0 25 0 110780.0 + 44085 YIYDEQGKLA 10 78 600.3010018075069 1198.5874506818136 2 600.3013183474541 MULTI CID FTMS 0 0 0 8605 474829.78125 0.2546801856908668 4 -0.2797203063964844 2 Unmodified _YIYDEQGKLA_ REV__ENSG00000213160|ENST00000392647|KLHL23 16.149105407346934 0.5765757077271437 5 Y{I|L}YEDEV[R{I|L}] 9 -1 + 77.089 0.0 0.0 6.4316 6.4316 94.263 0.0 0.0 0.0 70.09881272697172 2.632192780232785 2.632192780232785 24.948500216800937 0 0.4247425010840047 2.0 0.4247425010840047 0.0 Y{I|L}YEDEV[R{I|L}];Y{I|L}YE{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{I|L}A][PA];Y{I|L}YE{[QS]|[NT]}[KT][PA] 6.4316;4.3501;4.2032 -;-;- 104 + 1 2.073 64587.2 1.0 4226 4379 8605 SUDHL4_400M_050219_1,8607 SUDHL4_400M_050219_1,8607,YIYDEQGKLA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8608 46.161 28.0 2645400.0 25 0 743390.0 + 37845 TLTSKLYSL 9 82 513.2977348063307 1024.580916679461 2 513.2978393435478 MULTI CID FTMS 0 0 0 8605 2264318.0 1.0 0 0.0 3 Unmodified _TLTSKLYSL_ ENSG00000184076|ENST00000330029|UQCR10;nc|ENSG00000184076|Q9UDW1-2|UQCR10 38.17557092003332 0.0854718145212029 5 [{I|L}T][KS]YS{I|L}[{I|L}T] 9 4 + 57.157 0.0 0.0 5.5786 5.5786 90.875 0.0 0.0 0.0 9.72234667441434 12.86098023303616 9.72234667441434 14.030899869919438 0 0.5 2.0 1.5044321917401078 0.0 [{I|L}T][KS]YS{I|L}[{I|L}T];[KS]T{I|L}YS{I|L}[{I|L}T];[Y{I|L}][KS]TS{I|L}[{I|L}T];[KS][Y{I|L}]TS{I|L}[{I|L}T];[Y{I|L}]RAA[HV][VP];[H{I|L}]M[{I|L}T]{I|L}{[QG]|[NA]}{I|L};[H{I|L}]{I|L}[MT]{I|L}{[QG]|[NA]}{I|L};[H{I|L}]M[{I|L}T][KS][VP];[H{I|L}]{I|L}[MT][KS][VP];[KS][VP][HM]{I|L}[{I|L}T] 5.5786;4.2092;3.5574;2.2584;1.4722;1.3502;1.0327;0.88832;0.57086;0.087183 -;-;-;-;-;-;-;-;-;- 314 1 2.073 68195.6 1.0 4227 4379 8605 SUDHL4_400M_050219_1,8608 SUDHL4_400M_050219_1,8608,TLTSKLYSL True True TLTSKLYSL 46.161208 513.297839343548 16755177.0 8605.0 ENSG00000184076|ENST00000330029|UQCR10;;nc|ENSG00000184076|Q9UDW1-2|UQCR10 3.960657517115275 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8609 46.163 59.0 841270.0 25 0 87971.0 + 16708 KESTLHLVL 9 73 520.3112272594901 0 520.3110229372978 PEAK CID FTMS 0 0 0 8605 912977.3125 0.5876239097431012 -1 0.0668601989746093 4 Unmodified _KESTLHLVL_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000392399.3_1_2:137087013-137087097:-|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF 37.97399986684836 0.0716774499419844 5 {I|L}H 2 7 19.024 0.0 0.0 1.8317 0.0 0.0 230.16246202755505 555.2798555963499 785.442317623905 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {I|L}H 1.8317 + + 28 + 1 2.073 44982.8 1.0 4228 4379 8605 SUDHL4_400M_050219_1,8609 SUDHL4_400M_050219_1,8609,KESTLHLVL True True KESTLHLVL 46.162691 520.311022937298 8482862.0 8605.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC;;ENST00000392399.3_1_2:137087013-137087097:-|nuORF 5.216740449269612 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8610 46.164 73.0 500190.0 25 0 29245.0 + 2728 AEPEDHYFL 9 69 560.3220937269866 1118.6296345207732 2 560.3232299685478 MULTI CID FTMS 0 0 0 8605 649300.125 1.0 0 0.0 5 Unmodified _ATIAEIKNLF_ nc|ENSG00000133627|Q9P1U1-3|ACTR3B;ENST00000489779.1_1_2:114684960-114691984:+|nuORF;ENSG00000115091|ENST00000263238|ACTR3;ENST00000541653.2_1_14:22054224-22054383:-|nuORF;nc|ENSG00000133627|Q9P1U1-2|ACTR3B;ENSG00000133627|ENST00000256001|ACTR3B 3.944395688203298 0.708391353636983 5 {M(Oxidation (M))|F}Y 2 10 10.969 0.0 0.0 0.98058 0.0 0.0 330.31696469831064 475.1586397760376 805.4756044743482 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.98058 - 25 + 1 2.073 36199.0 1.0 4229 4379 8605 SUDHL4_400M_050219_1,8610 SUDHL4_400M_050219_1,8610,ATIAEIKNLF False False AEPEDHYFL 46.164426 560.323229968548 3001549.75 8605.0 nc|ENSG00000133627|Q9P1U1-3|ACTR3B;;ENST00000489779.1_1_2:114684960-114691984:+|nuORF;;ENSG00000115091|ENST00000263238|ACTR3;;ENST00000541653.2_1_14:22054224-22054383:-|nuORF;;nc|ENSG00000133627|Q9P1U1-2|ACTR3B;;ENSG00000133627|ENST00000256001|ACTR3B 0.5345270931720734 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8611 46.167 129.0 566980.0 25 0 90448.0 30091 QVELTFEETE 10 93 612.7831180532834 1223.5516831733669 2 612.7836181521416 MULTI CID FTMS 0 0 0 8605 542979.75 1.0 0 0.0 6 Unmodified _QVELTFEETE_ ENSG00000185608|ENST00000333130|MRPL40 9.38312468134398 0.6832340498775793 5 {[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[MT]{[C(Carbamidomethyl (C))G]|[NC]}TSV 11 5 + 46.502 0.0 0.0 3.8006 3.8006 85.859 0.0 0.0 0.0 23.20162661041831 10.30449511234618 10.30449511234618 15.587232884016622 0 0.0 2.0 0.2302046884880938 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[MT]{[C(Carbamidomethyl (C))G]|[NC]}TSV;{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[MT]{[C(Carbamidomethyl (C))G]|[NC]}{[WT]|[RM]};{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}[YG][DN]{[WT]|[RM]} 3.8006;2.5267;2.3828 -;-;- 276 + 1 2.073 56507.5 1.0 4230 4379 8605 SUDHL4_400M_050219_1,8611 SUDHL4_400M_050219_1,8611,QVELTFEETE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8612 46.17 117.0 320380.0 25 0 35485.0 45661 YVRRRLTAE 9 76 582.3349210974716 1162.655289261743 2 582.3348876833916 MULTI CID FTMS 0 0 0 8605 441723.03125 0.3410627842845969 10 -0.405029296875 7 Unmodified _YVRRRLTAE_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 2.302733041254933 0.8342969208511092 5 Q 1 9 6.9897 0.0 0.0 0.60118 0.0 0.0 581.3507686381382 450.23626491673787 1031.587033554876 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.60118 - 11 + 1 2.073 40223.5 1.0 4231 4379 8605 SUDHL4_400M_050219_1,8612 SUDHL4_400M_050219_1,8612,YVRRRLTAE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8613 46.172 91.0 720120.0 25 0 95255.0 + 18252 KVIDYVPGI 9 95 502.2945795872568 1002.5746062413136 2 502.2951232790947 MULTI CID FTMS 0 0 0 8605 462873.0625 0.5312279565656565 -1 0.0668601989746093 8 Unmodified _KVIDYVPGI_ ENSG00000163659|ENST00000295924|TIPARP 30.63653989081413 0.1413794767160703 5 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}VKV 6 7 26.471 0.0 0.0 2.6403 0.0 0.0 0.0 282.1451452125217 282.1451452125217 12.932498877383791 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}VKV 2.6403 - 282 1 2.073 53472.0 1.0 4232 4379 8605 SUDHL4_400M_050219_1,8613 SUDHL4_400M_050219_1,8613,KVIDYVPGI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8614 46.174 116.0 525030.0 25 0 89583.0 + 7628 EIVELILSLC 10 71 566.3222341090335 1130.629915284867 2 566.3220703005791 MULTI CID FTMS 0 0 0 8605 350333.90625 0.2533670903446866 10 -0.405029296875 9 Unmodified _EIVELILSLC_ REV__ENSG00000183914|ENST00000572933|DNAH2;REV__ENST00000574518.1_1_17:7674005-7689702:+|nuORF;REV__nc|ENSG00000183914|Q9P225-2|DNAH2 3.5964929083625545 0.7100006075494749 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.073 52879.6 1.0 4233 4379 8605 SUDHL4_400M_050219_1,8614 SUDHL4_400M_050219_1,8614,EIVELILSLC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8615 46.18 305.0 147710.0 25 0 39293.0 + 9401 FIVYLRRRL 9 56 618.3880468765879 1234.7615408199756 2 618.3885375857353 MULTI CID FTMS 0 0 0 8605 234178.59375 1.0 0 0.0 10 Unmodified _FIVYLRRRL_ REV__ENSG00000123124|ENST00000517970|WWP1;REV__ENST00000518683.5_1_8:87410815-87460532:+|nuORF;REV__nc|ENSG00000123124|Q9H0M0-3|WWP1;REV__nc|ENSG00000123124|Q9H0M0-6|WWP1 0.6014990680409731 0.8936861360942873 5 {I|L} 1 -1 9.5329 0.0 0.0 0.77204 0.0 0.0 1103.6669953871617 0.0 1103.6669953871617 0.0 9.532891574188822 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.77204 + + 5 + 1 2.073 41650.6 1.0 4234 4379 8605 SUDHL4_400M_050219_1,8615 SUDHL4_400M_050219_1,8615,FIVYLRRRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8616 46.186 348.0 145050.0 25 0 24057.0 + 20178 LLAAIEVRRPR 11 84 647.4113647341728 0 647.4113647341728 PEAK CID FTMS 0 0 0 -1 0 11 Unmodified _LLAAIEVRRPR_ REV__ENSG00000105996|ENST00000222718|HOXA2;REV__ENSG00000173917|ENST00000330070|HOXB2 3.2813086475875832 0.4761840153648598 5 M 1 -1 5.4846 0.0 0.0 0.42424 0.0 0.0 682.4405230614665 476.3016707082226 1158.742193769689 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.42424 - 6 + 1 2.073 47166.2 1.0 4235 4379 8605 SUDHL4_400M_050219_1,8616 SUDHL4_400M_050219_1,8616,LLAAIEVRRPR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8617 46.189 152.0 359950.0 25 0 49932.0 40469 VINRFTRR 8 95 531.3186419213757 1060.6227309095514 2 531.3201782107353 MULTI CID FTMS 0 0 0 8605 162531.875 0.9878495541873568 1 -0.1008033752441406 12 Unmodified _VINRFTRR_ ENSG00000005249|ENST00000265717|PRKAR2B 9.347437153973935 0.7675937258251505 5 [{I|L}V]N[R{M(Oxidation (M))|F}]{I|L}V[NS] 9 4 + 13.311 0.0 0.0 1.255 1.255 80.949 0.0 0.0 0.0 2.714992938385329 0.0 0.0 9.20818753952375 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}V]N[R{M(Oxidation (M))|F}]{I|L}V[NS];[{I|L}V]GG[R{M(Oxidation (M))|F}]{I|L}V[NS] 1.255;0.38682 -;- 39 1 2.073 47956.0 1.0 4236 4379 8605 SUDHL4_400M_050219_1,8617 SUDHL4_400M_050219_1,8617,VINRFTRR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8618 46.192 184.0 373460.0 25 0 40017.0 + 11804 GLMGAGIAQV 10 100 458.7493154268467 915.4840779204934 2 458.7495605349541 MULTI CID FTMS 0 0 0 8605 150289.625 0.5504930467067721 -1 0.0668601989746093 13 Unmodified _GLMGAGIAQV_ ENSG00000084754|ENST00000380649|HADHA;ENSG00000138796|ENST00000309522|HADH;nc|ENSG00000138796|Q16836-2|HADH;nc|ENSG00000138796|Q16836-3|HADH 36.04419817259434 0.1993394420055842 5 {[VA]|[{I|L}G]}GAAQ 6 4 23.734 0.0 0.0 2.5925 0.0 0.0 0.0 415.1937391355903 415.1937391355903 6.254924108031329 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}GAAQ 2.5925 - 200 1 2.073 59735.0 1.0 4237 4379 8605 SUDHL4_400M_050219_1,8618 SUDHL4_400M_050219_1,8618,GLMGAGIAQV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8619 46.198 282.0 254560.0 25 0 29928.0 + 32226 RVYPQAVYF 9 83 571.8033360183179 1141.5921191034356 2 571.8038818240166 MULTI CID FTMS 0 0 0 8605 140430.109375 0.8135497192571687 -1 0.0668601989746093 14 Unmodified _RVYPQAVYF_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 20.453626601364224 0.2830276176381075 5 [YV]R[QP]AVY{M(Oxidation (M))|F} 9 2 + 57.681 0.0 0.0 5.0527 5.0527 87.144 0.0 0.0 0.0 13.925449767853308 37.22357194224834 13.925449767853308 9.208187539523747 0 0.8807196863200843 1.6989700043360187 0.0 0.0 [YV]R[QP]AVY{M(Oxidation (M))|F};[YV][VG][QP]AVY{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}A][QP]AVY{M(Oxidation (M))|F} 5.0527;4.2461;2.7578 -;-;- 119 1 2.073 59819.7 1.0 4238 4379 8605 SUDHL4_400M_050219_1,8619 SUDHL4_400M_050219_1,8619,RVYPQAVYF False True RVYPQAVYF 46.197616 571.803881824017 900370.75 8605.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 6.72409709294637 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8620 46.211 800.0 127520.0 25 0 34182.0 + 39755 VELLRVDLRRL 11 125 691.4351620264226 1380.8557711196452 2 691.4357787966728 MULTI CID FTMS 0 0 0 8605 127921.671875 1.0 0 0.0 15 Unmodified _VELLRVDLRRL_ REV__ENSG00000126216|ENST00000261965|TUBGCP3;REV__nc|ENSG00000126216|Q96CW5-2|TUBGCP3 2.9952420565917617 0.861016188266951 5 {I|L} 1 -1 10.485 0.0 0.0 0.75928 0.0 0.0 1249.760462747378 0.0 1249.760462747378 0.0 7.385606273598313 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.75928 + + 107 + 1 2.073 79979.6 0.75 4239 4379 8605 SUDHL4_400M_050219_1,8620 SUDHL4_400M_050219_1,8620,VELLRVDLRRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8621 46.225 800.0 110700.0 25 0 29597.0 30837 RIKRKNRHEK 10 123 682.9218146771569 1363.8290764211138 2 682.9220458865166 MULTI CID FTMS 0 0 0 8605 119523.5625 0.8243234374752485 -1 0.0668601989746093 16 Unmodified _RIKRKNRHEK_ ENST00000389467.3_16:18871006-18872062:-|nuORF 1.4819007175156935 0.719781833666733 5 Y 1 10 12.764 0.0 0.0 0.93591 0.0 0.0 1182.7544284492371 0.0 1182.7544284492371 0.0 1.926754406820086 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.93591 - 49 + 1 2.073 71435.8 0.7300000190734863 4240 4379 8605 SUDHL4_400M_050219_1,8621 SUDHL4_400M_050219_1,8621,RIKRKNRHEK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8622 46.239 800.0 429010.0 25 0 90330.0 20503 LLLHKHVT 8 176 480.8010031072836 959.5874532813672 2 480.8022033572197 MULTI CID FTMS 0 0 0 8605 90628.703125 0.0203092807603842 -5 0.2329750061035156 17 Unmodified _LLLHKHVT_ ENST00000401651.5_1_7:22766799-22768369:+|nuORF 9.347437153973935 0.7675937258251505 5 {I|L} 1 7 10.837 0.0 0.0 1.1294 0.0 0.0 828.4922364618344 0.0 828.4922364618344 0.0 0.7488116016666613 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1294 + + 133 + 1 2.073 258141.7 0.5199999809265137 4241 4379 8605 SUDHL4_400M_050219_1,8622 SUDHL4_400M_050219_1,8622,LLLHKHVT False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8623 46.254 800.0 125650.0 25 0 26051.0 -1 0 100 938.4348017958794 1874.8550506585584 2 938.9373046755792 MULTI CID FTMS 0 0 0 8605 215828.953125 0.5293652692187445 4 -0.2797203063964844 18 5 [{I|L}V]EVN{[CT]|[{M(Oxidation (M))|F}G]}[C(Carbamidomethyl (C))C]A{M(Oxidation (M))|F}Y 12 -1 23.488 0.0 0.0 1.2528 0.0 0.0 0.0 469.2446728483214 469.2446728483214 6.97797822218099 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}V]EVN{[CT]|[{M(Oxidation (M))|F}G]}[C(Carbamidomethyl (C))C]A{M(Oxidation (M))|F}Y 1.2528 - 1162 1 2.073 72380.7 0.800000011920929 4242 4379 8605 SUDHL4_400M_050219_1,8623 SUDHL4_400M_050219_1,8623, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8625 46.26 101.0 981740.0 25 0 286460.0 + 20534 LLLSAEPVPA 10 100 505.3001765225853 1008.5858001119706 2 505.3002502322197 MULTI CID FTMS 0 0 0 8624 829178.8125 0.2750025019333498 1 -0.1433525085449218 1 Unmodified _LLLSAEPVPA_ ENSG00000007312|ENST00000006750|CD79B;ENST00000558969.1_1_17:62008689-62009627:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B 48.345845343767074 0.089859443182303 5 {I|L}{I|L}SAE{I|L}P 7 4 41.519 0.0 0.0 4.1166 0.0 0.0 0.0 282.1404625477706 282.1404625477706 3.5953038725014608 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.2302046884880935 0.0 {I|L}{I|L}SAE{I|L}P 4.1166 - 1052 1 2.058 81064.3 1.0 4243 4380 8624 SUDHL4_400M_050219_1,8625 SUDHL4_400M_050219_1,8625,LLLSAEPVPA True True LLLSAEPVPA 46.259971 505.30025023222 23644980.0 8624.0 ENSG00000007312|ENST00000006750|CD79B;;nc|ENSG00000007312|P40259-2|CD79B;;ENST00000558969.1_1_17:62008689-62009627:-|nuORF 5.491265137990316 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8626 46.263 148.0 2166200.0 25 0 230010.0 + 20288 LLDVPTAAV 9 131 449.7656302605325 897.5167075878651 2 449.7657958865166 MULTI CID FTMS 0 0 0 8624 1634079.5 0.0118442236226751 -7 0.3376617431640625 2 Unmodified _LLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 70.71552829651908 0.0208223590022201 5 {I|L}{I|L}DV[TP]AG{I|L} 9 2 + 47.055 0.0 0.0 5.2428 5.2428 79.435 0.0 0.0 0.0 1.1570093835727064 2.426319073833895 1.1570093835727064 1.1570093835727064 0 1.2672203223519531 1.6989700043360187 1.0 0.0 {I|L}{I|L}DV[TP]AG{I|L};[TP]A{I|L}{I|L}DVG{I|L};[TP]AA{I|L}D{I|L}VV;[TP]A{I|L}D{I|L}VG{I|L};[TP]A{I|L}{I|L}DAVV;[TP]AAVE{I|L}VV;[TP]AA{I|L}{I|L}DVV;[TP]A{I|L}D{I|L}AVV;[TP]A{I|L}AD{I|L}VV;[TP]AA{I|L}DVV{I|L} 5.2428;5.1139;4.9725;4.8321;4.6422;4.4347;4.4347;4.3604;4.3458;3.9946 -;-;-;-;-;-;-;-;-;- 2458 1 2.058 244829.6 1.0 4244 4380 8624 SUDHL4_400M_050219_1,8626 SUDHL4_400M_050219_1,8626,LLDVPTAAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8627 46.264 62.0 1081300.0 25 0 279310.0 -1 KLKTMPIP 8 59 472.2878393395711 942.5611257459424 2 472.2879821658134 MULTI CID FTMS 0 0 0 8624 1565550.5 0.3154715623801969 -1 0.1008033752441406 3 Oxidation (M) _KLKTM(Oxidation (M))PIP_ ENST00000517856.5_3_8:62573885-62574080:-|nuORF 0.7936320650641473 0.8195151834710337 5 P 1 -1 0.71334 0.0 0.0 0.075681 0.0 0.0 722.4292878326595 120.05121790103748 842.480505733697 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.075681 + + 1 + 1 2.058 56816.4 1.0 4245 4380 8624 SUDHL4_400M_050219_1,8627 SUDHL4_400M_050219_1,8627,KLKTMPIP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8628 46.266 70.0 1109300.0 25 0 346920.0 + -1 LLHPSPCV 8 67 461.7448733888451 921.4751938444904 2 461.7448608279228 MULTI CID FTMS 0 0 0 8624 1408942.0 0.2307003213727185 -7 0.3376617431640625 4 Carbamidomethyl (C) _LLHPSPC(Carbamidomethyl (C))V_ REV__ENSG00000197591|ENST00000355784|OR11L1 6.354104778181461 0.7857632046190106 5 {I|L}{I|L}D 3 -1 27.447 0.0 0.0 2.9786 0.0 0.0 0.0 577.2562051572434 577.2562051572434 5.012262311882765 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}D 2.9786 - 36 1 2.058 65414.4 1.0 4246 4380 8624 SUDHL4_400M_050219_1,8628 SUDHL4_400M_050219_1,8628,LLHPSPCV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8629 46.268 72.0 676830.0 25 0 134280.0 39913 VFQALQYLRK 10 63 633.3695789979172 1264.7246050626345 2 633.3696166872978 MULTI CID FTMS 0 0 0 8624 1253090.625 1.0 0 0.0 5 Unmodified _VFQALQYLRK_ ENSG00000095564|ENST00000265990|BTAF1;nc|ENSG00000095564|O14981-2|BTAF1 1.4819007175156935 0.719781833666733 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.058 45542.5 1.0 4247 4380 8624 SUDHL4_400M_050219_1,8629 SUDHL4_400M_050219_1,8629,VFQALQYLRK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8630 46.27 83.0 1910000.0 25 0 323170.0 -1 LICFICPA 8 112 468.7392096127669 935.4638662923338 2 468.7390930056572 MULTI CID FTMS 0 0 0 8624 1087537.625 0.2444385138158049 -7 0.3376617431640625 6 Carbamidomethyl (C) _LICFIC(Carbamidomethyl (C))PA_ ENSG00000157637|ENST00000374759|SLC38A10;nc|ENSG00000157637|Q9HBR0-2|SLC38A10;nc|ENSG00000157637|Q9HBR0-3|SLC38A10 32.45364647766026 0.3613649037604678 5 {I|L}{I|L}D 3 -1 46.414 0.0 0.0 4.9616 0.0 0.0 0.0 591.248316596716 591.248316596716 23.711375162600703 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {I|L}{I|L}D 4.9616 - 381 + 1 2.058 124184.2 1.0 4248 4380 8624 SUDHL4_400M_050219_1,8630 SUDHL4_400M_050219_1,8630,LICFICPA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8631 46.271 77.0 1296700.0 25 0 143870.0 + 11670 GLDVDGIYRV 10 90 553.7957496036729 1105.5769462741457 2 553.7961303591728 MULTI CID FTMS 0 0 0 8624 1071451.5 1.0 0 0.0 7 Unmodified _GLDVDGIYRV_ ENSG00000075884|ENST00000295095|ARHGAP15;ENSG00000123329|ENST00000393791|ARHGAP9;ENST00000546704.1_1_12:57868176-57868820:-|nuORF;ENST00000549436.5_1_2:144276854-144461094:+|nuORF;nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;nc|ENSG00000123329|Q9BRR9-4|ARHGAP9;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;nc|ENSG00000123329|Q9BRR9|ARHGAP9 47.594388314883695 0.0942698883389255 5 {[VA]|[{I|L}G]}DVVDAYRV 10 3 + 90.628 0.0 0.0 8.1973 8.1973 85.604 0.0 0.0 0.0 27.269987279362624 8.62826806974688 8.62826806974688 0.796896906561031 0 1.3494850021680094 2.0 0.805462187404089 0.3494850021680094 {[VA]|[{I|L}G]}DVVDAYRV;{[VA]|[{I|L}G]}DVDVAYRV;{[VA]|[{I|L}G]}DVVDARYV;{[VA]|[{I|L}G]}DVDVARYV;{[VA]|[{I|L}G]}VDVDAYRV;{[VA]|[{I|L}G]}VDDVAYRV;{[VA]|[{I|L}G]}DVDG{I|L}YRV;{[VA]|[{I|L}G]}VDVDARYV;{[VA]|[{I|L}G]}DVVDAV[YR];{[VA]|[{I|L}G]}VDDVARYV 8.1973;8.1252;7.925;7.853;7.6977;7.6256;7.493;7.4254;7.4169;7.3533 -;-;-;-;-;-;+;-;-;- + 947 + 1 2.058 79157.1 1.0 4249 4380 8624 SUDHL4_400M_050219_1,8631 SUDHL4_400M_050219_1,8631,GLDVDGIYRV True True GLDVDGIYRV 46.271417 553.796130359173 6794699.0 8624.0 ENST00000549436.5_1_2:144276854-144461094:+|nuORF;;nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;;ENSG00000123329|ENST00000393791|ARHGAP9;;ENST00000546704.1_1_12:57868176-57868820:-|nuORF;;ENSG00000075884|ENST00000295095|ARHGAP15;;nc|ENSG00000123329|Q9BRR9|ARHGAP9;;nc|ENSG00000123329|Q9BRR9-4|ARHGAP9 6.067777633666992 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8632 46.276 228.0 303670.0 25 0 26264.0 13518 HMPLLKLWV 9 101 568.8352515693626 1135.6559502055252 2 568.8354980349541 MULTI CID FTMS 0 0 0 8624 740410.0625 0.9185724760148094 1 -0.1433525085449218 8 Unmodified _HMPLLKLWV_ ENSG00000145476|ENST00000378802|CYP4V2;nc|ENSG00000145476|Q6ZWL3-2|CYP4V2 2.302733041254933 0.8342969208511092 5 {I|L} 1 8 9.5329 0.0 0.0 0.83942 0.0 0.0 1004.560641833258 0.0 1004.560641833258 0.0 6.433947782746854 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.83942 + + 43 + 1 2.058 57362.3 1.0 4250 4380 8624 SUDHL4_400M_050219_1,8632 SUDHL4_400M_050219_1,8632,HMPLLKLWV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8633 46.28 250.0 367730.0 25 0 72342.0 22792 LQSRRTLLAPQ 11 92 641.8822412905197 1281.7499296478393 2 641.8820678591728 MULTI CID FTMS 0 0 0 8624 660412.5625 0.9418327043367032 1 -0.1433525085449218 9 Unmodified _LQSRRTLLAPQ_ ENST00000373178.4_1_1:36559063-36559231:+|nuORF 2.735195868890462 0.8622431031272658 5 {I|L} 1 10 9.0908 0.0 0.0 0.70925 0.0 0.0 1150.6544839464705 0.0 1150.6544839464705 0.0 9.090782060276135 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.70925 + + 9 + 1 2.058 73952.9 1.0 4251 4380 8624 SUDHL4_400M_050219_1,8633 SUDHL4_400M_050219_1,8633,LQSRRTLLAPQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8634 46.29 551.0 479170.0 25 0 33026.0 27557 PLAGLVIVSER 11 173 577.3485807330718 1152.6826085329435 2 577.3486205935478 MULTI CID FTMS 0 0 0 8624 479460.34375 0.6648792514254874 1 -0.1433525085449218 10 Unmodified _PLAGLVIVSER_ MSTA_dup8488|chr7:73072363-73072749:+|1.0378218154720882|0.2091665475579687|2.31|48.0|2|1|sense 2.9952420565917617 0.861016188266951 5 Y 1 11 12.764 0.0 0.0 1.1073 0.0 0.0 971.6079147846998 0.0 971.6079147846998 0.0 2.4866232040397485 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.1073 - 403 + 1 2.058 196095.5 1.0 4252 4380 8624 SUDHL4_400M_050219_1,8634 SUDHL4_400M_050219_1,8634,PLAGLVIVSER False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 8635 46.303 735.0 511920.0 25 0 101480.0 + 15080 IMKVIKFV 8 199 489.3140956704832 976.6136384077664 2 489.3146240115166 MULTI CID FTMS 0 0 0 8624 336019.6875 0.1195998152362305 -7 0.3376617431640625 11 Unmodified _IMKVIKFV_ REV__ENSG00000039123|ENST00000230640|MTREX 0.6903765706972694 0.8201419426409876 5 V 1 -1 10.089 0.0 0.0 1.033 0.0 0.0 859.5337719300304 0.0 859.5337719300304 0.0 -1.1092437480817807 -1.1092437480817807 0.0 0 0.0 0.0 0.0 0.0 V 1.033 + + 69 + 1 2.058 284322.5 1.0 4253 4380 8624 SUDHL4_400M_050219_1,8635 SUDHL4_400M_050219_1,8635,IMKVIKFV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8636 46.317 800.0 269070.0 25 0 22016.0 + + -1 AVWKESFQV 9 194 546.7607710752052 1091.5069892172105 2 547.2879516482353 MULTI CID FTMS 0 0 0 8624 39781.0234375 1.0 0 0.0 12 Carbamidomethyl (C) _KWEKENC(Carbamidomethyl (C))V_ ENSG00000181544|ENST00000650831|FANCB 23.1484247019978 0.5573009939494978 5 {[VA]|[{I|L}G]}WSS{M(Oxidation (M))|F}Q 7 -1 45.408 0.0 0.0 4.1601 0.0 0.0 0.0 283.1051580165069 283.1051580165069 20.23293745652716 0.0 0.0 0.0 0 0.0 2.0 0.7753187046026266 0.3252574989159953 {[VA]|[{I|L}G]}WSS{M(Oxidation (M))|F}Q 4.1601 - 3277 1 2.058 167503.8 0.8700000047683716 4254 4380 8624 SUDHL4_400M_050219_1,8636 SUDHL4_400M_050219_1,8636,KWEKENCV False False AVWKESFQV 46.316644 547.287951648235 2253371.0 8624.0 ENSG00000181544|ENST00000650831|FANCB 6.242211182912191 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8637 46.33 800.0 159170.0 25 0 14473.0 + 34328 SLSEKQYFL 9 150 557.7930786013603 0 557.7930786013603 PEAK CID FTMS 0 0 0 -1 0 13 Unmodified _SLSEKQYFL_ ENSG00000106608|ENST00000453200|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP 53.40400417844725 0.023745606374537 5 {M(Oxidation (M))|F}{[TV]|[{I|L}S]}YQGSD 8 6 39.162 0.0 0.0 3.5168 0.0 0.0 131.08636982246236 82.06714807681874 213.1535178992811 0.0 0.0 0.0 0.0 0 1.2059771852360797 0.0 1.024227503252014 0.3494850021680094 {M(Oxidation (M))|F}{[TV]|[{I|L}S]}YQGSD 3.5168 - 1279 + 1 2.058 100477.8 0.75 4255 4380 8624 SUDHL4_400M_050219_1,8637 SUDHL4_400M_050219_1,8637,SLSEKQYFL True True SLSEKQYFL 46.330475 557.79307860136 2594041.0 8624.0 nc|ENSG00000106608|Q8TCY9-2|URGCP;;nc|ENSG00000106608|Q8TCY9-3|URGCP;;ENSG00000106608|ENST00000453200|URGCP;;nc|ENSG00000106608|Q8TCY9-4|URGCP 5.591915766398112 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8638 46.335 173.0 462020.0 25 0 47614.0 + 184 AANPHSFVF 9 107 495.2453749894475 0 495.2460510134697 PEAK CID FTMS 0 0 0 8624 163327.0 0.7012854819822799 -1 0.1008033752441406 14 Unmodified _AANPHSFVF_ ENSG00000130810|ENST00000253107|PPAN;nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN 47.74868867922204 0.0378261468855112 5 V{M(Oxidation (M))|F}S 3 8 17.167 0.0 0.0 1.7367 0.0 0.0 165.07496521151376 487.2064303033813 652.281395514895 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 V{M(Oxidation (M))|F}S 1.7367 - 139 + 1 2.058 65709.8 1.0 4256 4380 8624 SUDHL4_400M_050219_1,8638 SUDHL4_400M_050219_1,8638,AANPHSFVF True True AANPHSFVF 46.335309 495.24605101347 2066291.75 8624.0 nc|ENSG00000130810|Q9NQ55-2|PPAN;;nc|ENSG00000130810|Q9NQ55-3|PPAN;;ENSG00000130810|ENST00000253107|PPAN 8.025676091512045 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8639 46.349 800.0 167460.0 25 0 24789.0 + 33429 SIAEVVHQL 9 160 498.2781555056572 0 498.2781555056572 PEAK CID FTMS 0 0 0 -1 0 15 Unmodified _SIAEVVHQL_ ENSG00000178950|ENST00000314167|GAK;ENST00000504435.1_1_4:882633-887812:-|nuORF;nc|ENSG00000178950|O14976-2|GAK 38.17557092003332 0.0706864996250298 5 PEAD 4 8 38.188 0.0 0.0 3.8398 0.0 0.0 497.2985131818376 82.0671633356078 579.3656765174453 0.0 0.0 0.0 0.0 0 1.805462187404089 0.0 0.7226053632739033 0.0 PEAD 3.8398 - 332 + 1 2.058 102008.5 0.6899999976158142 4257 4380 8624 SUDHL4_400M_050219_1,8639 SUDHL4_400M_050219_1,8639,SIAEVVHQL True True SIAEVVHQL 46.349121 498.278155505657 456667.46875 8624.0 ENSG00000178950|ENST00000314167|GAK;;nc|ENSG00000178950|O14976-2|GAK;;ENST00000504435.1_1_4:882633-887812:-|nuORF 5.758505026499431 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8640 46.363 800.0 95353.0 25 0 15953.0 36208 SVWNRRKKL 9 122 593.8621703982353 0 593.8621703982353 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _SVWNRRKKL_ ENST00000547842.1_1_12:49225833-49226274:-|nuORF 1.844237919475145 0.3444685223463735 5 {I|L}C(Carbamidomethyl (C)) 2 9 9.464 0.0 0.0 0.79817 0.0 0.0 126.15852978339996 783.4010103815061 909.559540164906 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}C(Carbamidomethyl (C)) 0.79817 - 6 + 1 2.058 60180.3 0.6499999761581421 4258 4380 8624 SUDHL4_400M_050219_1,8640 SUDHL4_400M_050219_1,8640,SVWNRRKKL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8641 46.366 55.0 1356900.0 25 0 312530.0 -1 RLCTECGL 8 104 476.2226069478161 950.4306609624324 2 476.7244750857353 MULTI CID FTMS 0 0 0 8624 476245.3125 0.258536785464471 -6 0.3337783813476562 17 Carbamidomethyl (C) _RLC(Carbamidomethyl (C))TECGL_ ENSG00000061492|ENST00000506684|WNT8A;nc|ENSG00000061492|Q9H1J5-2|WNT8A;nc|ENSG00000061492|Q9H1J5|WNT8A 14.581692164780916 0.6954967302934248 5 RVEV 4 -1 35.923 0.0 0.0 3.7796 0.0 0.0 0.0 464.1252655389045 464.1252655389045 8.475409843999344 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.3807196863200844 0.0 RVEV 3.7796 - 62 + 1 2.058 62011.5 1.0 4259 4380 8624 SUDHL4_400M_050219_1,8641 SUDHL4_400M_050219_1,8641,RLCTECGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8642 46.376 579.0 162120.0 25 0 36879.0 14809 ILEFLPKQRR 10 115 650.3971435427666 0 650.3971435427666 PEAK CID FTMS 0 0 0 -1 0 18 Unmodified _ILEFLPKQRR_ ENSG00000111364|ENST00000238146|DDX55;ENST00000539934.5_1_12:124093257-124102497:+|nuORF;ENST00000542286.5_1_12:124093257-124104017:+|nuORF 1.6526216038709556 0.3961065659209837 5 W 1 10 3.9794 0.0 0.0 0.3064 0.0 0.0 776.5858997790893 333.09641443424067 1109.68231421333 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.3064 - 1 + 1 2.058 85327.6 1.0 4260 4380 8624 SUDHL4_400M_050219_1,8642 SUDHL4_400M_050219_1,8642,ILEFLPKQRR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8643 46.387 657.0 219800.0 25 0 16608.0 -1 ALLRSMPCLSH 11 141 428.8912646567511 0 429.2483398318291 PEAK CID FTMS 0 0 0 8624 52847.7265625 0.2151660894241101 -2 0.16766357421875 19 Carbamidomethyl (C) _ALLRSMPC(Carbamidomethyl (C))LSH_ ENST00000492465.2_1_10:104210065-104215128:+|nuORF;ENST00000494270.6_1_10:104210065-104211313:+|nuORF 5.047519993296601 0.4761840153648598 5 G 1 -1 5.4846 0.0 0.0 0.64089 0.0 0.0 699.6408534328397 96.0827883356078 795.7236417684475 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.64089 - 18 + 1 2.058 116105.0 1.0 4261 4380 8624 SUDHL4_400M_050219_1,8643 SUDHL4_400M_050219_1,8643,ALLRSMPCLSH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8644 46.398 622.0 307850.0 25 0 20693.0 + -1 GMYPNLVHV 9 186 516.2910034060478 0 516.2910034060478 PEAK CID FTMS 0 0 0 -1 0 20 Carbamidomethyl (C),Oxidation (M) _LLM(Oxidation (M))PRLIC(Carbamidomethyl (C))_ ENSG00000047188|ENST00000161863|YTHDC2 19.438996006549623 0.4285751805470146 5 {I|L}{I|L} 2 -1 10.886 0.0 0.0 1.0563 0.0 0.0 113.08644909549557 688.295554009518 801.3820031050136 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}{I|L} 1.0563 + + 346 + 1 2.058 148978.2 1.0 4262 4380 8624 SUDHL4_400M_050219_1,8644 SUDHL4_400M_050219_1,8644,LLMPRLIC False False GMYPNLVHV 46.397977 516.291003406048 3612354.75 8624.0 ENSG00000047188|ENST00000161863|YTHDC2 3.69322935740153 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8646 46.402 22.0 2359700.0 25 0 376520.0 + 40813 KVGPVPVLV 9 70 454.3022934028788 906.5900338725576 2 454.3024474978447 MULTI CID FTMS 0 0 0 8645 1502945.5 0.2400037718527326 1 -0.0265121459960937 1 Unmodified _VLLTHLLV_ ENSG00000106803|ENST00000223641|SEC61B 34.18733598223924 0.3315367612694167 5 [VP]K[VG]PV{I|L}V 9 6 + 61.616 0.0 0.0 6.7965 6.7965 93.119 0.0 0.0 0.0 9.232712163289278 43.28849377292904 9.232712163289278 9.51544993495972 0 1.274227503252014 1.3010299956639813 0.0 0.0 [VP]K[VG]PV{I|L}V;[VP]G[VP]KV{I|L}V;[{I|L}V][{I|L}T][H{I|L}]{I|L}V;[PG]V[VP]KV{I|L}V 6.7965;5.7469;3.4184;3.4151 -;-;+;- + 191 1 1.996 48545.8 1.0 4263 4381 8645 SUDHL4_400M_050219_1,8646 SUDHL4_400M_050219_1,8646,VLLTHLLV False False KVGPVPVLV 46.402002 454.302447497845 116251620.0 8645.0 ENSG00000106803|ENST00000223641|SEC61B 5.094552834828694 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8647 46.408 305.0 425100.0 25 0 61425.0 + 28203 KLMELYERL 9 126 597.8565151449595 1193.698477356719 2 597.8563110232353 MULTI CID FTMS 0 0 0 8645 170774.46875 0.0951409475530239 10 -0.2292366027832031 2 Unmodified _PQFPPALRLR_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 3.2813086475875832 0.7114585191678878 5 {I|L}ME{I|L} 4 9 18.047 0.0 0.0 1.5119 0.0 0.0 128.14623678244317 576.2811983697874 704.4274351522306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}ME{I|L} 1.5119 - 45 + 1 1.996 98475.7 1.0 4264 4381 8645 SUDHL4_400M_050219_1,8647 SUDHL4_400M_050219_1,8647,PQFPPALRLR False False KLMELYERL 46.407591 597.856311023235 1376109.0 8645.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2 2.5466213623682656 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8648 46.409 40.0 1518900.0 25 0 287030.0 + -1 PGKVVCHRLR 10 72 611.3559208962663 1220.6972888593325 2 611.3556396365166 MULTI CID FTMS 0 0 0 8645 1921268.75 0.5260543950679921 -6 0.4277496337890625 3 Carbamidomethyl (C) _PGKVVC(Carbamidomethyl (C))HRLR_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 1.4819007175156935 0.719781833666733 5 H 1 -1 0.9691 0.0 0.0 0.079389 0.0 0.0 951.560156146245 129.05632959537346 1080.6164857416186 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.079389 + + 2 + 1 1.996 53907.3 1.0 4265 4381 8645 SUDHL4_400M_050219_1,8648 SUDHL4_400M_050219_1,8648,PGKVVCHRLR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8649 46.415 321.0 762300.0 25 0 86403.0 -1 0 119 910.5010689410728 1818.9875849489447 2 910.5010864138604 MULTI CID FTMS 0 0 0 8645 650852.25 0.8328110554853569 -6 0.4277496337890625 4 5 [TP]AA[RN]VA 8 -1 53.469 0.0 0.0 2.9395 0.0 0.0 0.0 1035.5239905143865 1035.5239905143865 26.30215651453608 0.0 0.0 0.0 0 0.0 0.8239087409443188 1.98239816956497 0.0 [TP]AA[RN]VA 2.9395 - 7271 1 1.996 165088.3 1.0 4266 4381 8645 SUDHL4_400M_050219_1,8649 SUDHL4_400M_050219_1,8649, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8650 46.421 365.0 331200.0 25 0 83011.0 14904 ILLGHKEKERS 11 94 655.3814906441756 0 655.3820678591728 PEAK CID FTMS 0 0 0 8645 488876.25 0.8585992135637692 -1 0.1433525085449218 5 Unmodified _ILLGHKEKERS_ ENSG00000188738|ENST00000424728|FSIP2;nc|ENSG00000188738|Q5CZC0-2|FSIP2 2.9952420565917617 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.996 108790.7 1.0 4267 4381 8645 SUDHL4_400M_050219_1,8650 SUDHL4_400M_050219_1,8650,ILLGHKEKERS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8651 46.423 72.0 318680.0 25 0 33739.0 44109 YKRRRRSW 8 50 604.3482024849948 1206.6818520367897 2 604.3480712771416 MULTI CID FTMS 0 0 0 8645 460802.03125 0.2473751899561176 -6 0.4277496337890625 6 Unmodified _YKRRRRSW_ ENST00000542829.1_2_13:30002925-30054358:+|nuORF 0.6014990680409731 0.820681427635312 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.996 22835.3 1.0 4268 4381 8645 SUDHL4_400M_050219_1,8651 SUDHL4_400M_050219_1,8651,YKRRRRSW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8652 46.424 65.0 1196600.0 25 0 203210.0 + -1 VLCRLVCLSI 10 86 588.3348062467425 1174.6550595602848 2 588.3350707888603 MULTI CID FTMS 0 0 0 8645 886508.375 0.6757697480218294 -5 0.3452606201171875 7 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))RLVCLSI_ REV__ENST00000447069.5_3_2:201677557-201677948:+|nuORF 3.944395688203298 0.708391353636983 5 W 1 -1 1.2591 0.0 0.0 0.10719 0.0 0.0 662.3702828042286 323.17145715885005 985.5417399630788 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.10719 - 9 + 1 1.996 60710.0 1.0 4269 4381 8645 SUDHL4_400M_050219_1,8652 SUDHL4_400M_050219_1,8652,VLCRLVCLSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8654 46.431 257.0 679800.0 25 0 105290.0 14970 ILPQDKVIIAE 11 123 619.8690591047385 1237.723565276277 2 620.3701049685478 MULTI CID FTMS 0 0 0 8653 501096.375 0.322702487052121 -5 0.357177734375 1 Unmodified _ILPQDKVIIAE_ ENSG00000133657|ENST00000645319|ATP13A3;ENST00000484023.1_1_3:194151670-194152613:-|nuORF;nc|ENSG00000133657|Q9H7F0-2|ATP13A3;nc|ENSG00000133657|Q9H7F0|ATP13A3 5.731851221503515 0.8481046878870278 5 {I|L}{I|L}D 3 8 7.813 0.0 0.0 0.63124 0.0 0.0 0.0 893.5048512472332 893.5048512472332 6.5539315392494775 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 {I|L}{I|L}D 0.63124 - 54 1 1.996 130786.4 1.0 4270 4382 8653 SUDHL4_400M_050219_1,8654 SUDHL4_400M_050219_1,8654,ILPQDKVIIAE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8655 46.434 122.0 651310.0 25 0 97616.0 + 18253 KVIDYVPGI 9 93 502.2945795872568 1002.5746062413136 2 502.2945129275322 MULTI CID FTMS 0 0 0 8653 483299.875 0.554671303657225 2 -0.0231971740722656 2 Unmodified _KVIDYVPGI_ ENSG00000163659|ENST00000295924|TIPARP 30.63653989081413 0.1413794767160703 5 {[RE]|[WV]}VKV{I|L} 6 6 29.922 0.0 0.0 2.9845 0.0 0.0 0.0 275.0679110162719 275.0679110162719 17.703037561203843 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[RE]|[WV]}VKV{I|L} 2.9845 - 126 + 1 1.996 67255.0 1.0 4271 4382 8653 SUDHL4_400M_050219_1,8655 SUDHL4_400M_050219_1,8655,KVIDYVPGI False True KVIDYVPGI 46.43356 502.294512927532 13946614.0 8653.0 ENSG00000163659|ENST00000295924|TIPARP 5.359287261962891 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8657 46.438 46.0 1579400.0 25 0 142410.0 + 10587 FVIRNIVEA 9 74 530.8108486068874 1059.6071442805746 2 530.8118774294853 MULTI CID FTMS 0 0 0 8656 1438651.875 1.0 0 0.0 1 Unmodified _FVIRNIVEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 45.69961567697781 0.0497987121815769 5 [{M(Oxidation (M))|F}V]{I|L}RN{I|L}VEA 9 0 + 38.606 0.0 0.0 3.6434 3.6434 83.844 0.0 0.0 0.0 0.7378621416091917 19.397737521010832 0.7378621416091917 9.208187539523756 0 0.9731975075880328 0.0 0.0 0.0 + + [{M(Oxidation (M))|F}V]{I|L}RN{I|L}VEA;[{M(Oxidation (M))|F}V]{I|L}RGG{I|L}VEA;[{M(Oxidation (M))|F}V]{I|L}R[KA]V{NN|[MP]|[D{I|L}]|[EV]} 3.6434;2.7744;0.34262 +;-;- + 89 1 1.996 64920.2 1.0 4272 4383 8656 SUDHL4_400M_050219_1,8657 SUDHL4_400M_050219_1,8657,FVIRNIVEA True True FVIRNIVEA 46.437569 530.811877429485 10324231.0 8656.0 ENST00000465478.1_1_8:93156318-93156576:-|nuORF;;ENSG00000197728|ENST00000646449|RPS26;;nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENST00000447425.1_1_7:22813267-22813561:-|nuORF 6.399675210316976 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8658 46.443 298.0 613760.0 25 0 72062.0 17046 KKSTPKVLYE 10 132 596.8488977630911 0 596.8483154177666 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _KKSTPKVLYE_ ENSG00000167183|ENST00000300557|PRR15L 6.2057823575117 0.3961065659209838 5 {I|L}ME{I|L}T 5 9 13.901 0.0 0.0 1.1665 0.0 0.0 126.1321694502072 475.2192006904976 601.3513701407048 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}ME{I|L}T 1.1665 - 29 + 1 1.996 137907.1 1.0 4273 4383 8656 SUDHL4_400M_050219_1,8658 SUDHL4_400M_050219_1,8658,KKSTPKVLYE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8659 46.448 247.0 62359.0 25 0 9946.1 -1 0 36 1157.514819324017 0 1157.514819324017 PEAK CID FTMS 0 0 0 -1 0 3 5 D 1 -1 0.088644 0.0 0.0 0.0038324 0.0 0.0 1168.258690306434 1026.7085665338502 2194.9672568402843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.0038324 - 1 + 1 1.996 21073.9 1.0 4274 4383 8656 SUDHL4_400M_050219_1,8659 SUDHL4_400M_050219_1,8659, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8661 46.457 246.0 503070.0 25 0 165550.0 20688 LLRLWTKL 8 96 521.8399070576675 1041.6652611821348 2 522.3407470583916 MULTI CID FTMS 0 0 0 8660 594004.0625 0.9946100540951563 -2 0.0231971740722656 1 Unmodified _LLRLWTKL_ ENST00000468074.1_1_3:136455757-136455820:-|nuORF 5.760428011301431 0.7893668129297577 5 {I|L} 1 7 8.7724 0.0 0.0 0.84216 0.0 0.0 910.5698002219772 0.0 910.5698002219772 0.0 3.287886595888967 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.84216 + + 16 + 1 1.996 96957.5 1.0 4275 4384 8660 SUDHL4_400M_050219_1,8661 SUDHL4_400M_050219_1,8661,LLRLWTKL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8662 46.462 264.0 502200.0 25 0 71928.0 + 37911 TLWYRAPEV 9 119 567.8009008531455 1133.587248773091 2 567.8007690310478 MULTI CID FTMS 0 0 0 8660 508212.5 0.9023677470946652 1 -0.0302925109863281 2 Unmodified _TLWYRAPEV_ ENSG00000105810|ENST00000424848|CDK6;ENSG00000135446|ENST00000257904|CDK4;ENST00000473078.1_1_7:92300738-92355023:-|nuORF;nc|ENSG00000135446|P11802-2|CDK4 53.4695610476455 0.0327627608358129 5 T{I|L}WYRAPEV 9 0 + 86.284 0.0 0.0 7.6116 7.6116 85.612 0.0 0.0 0.0 73.51977585882042 2.786144654057665 2.786144654057665 1.4211382937389772 0 1.6549471895720984 2.0 0.2614393726401688 0.4247425010840047 + + T{I|L}WYRAPEV;T{I|L}WYRAEPV;T{I|L}WYRAPD{I|L};T{I|L}EARYWPV;T{I|L}ERAYWPV;[{I|L}T]EARYW[VP];T{I|L}VWAYWPV;T{I|L}WVAYWPV;T{I|L}WYAVWPV;T{I|L}V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EV 7.6116;7.4862;7.346;6.3924;6.1055;5.7714;5.4451;5.2696;5.2696;5.217 +;-;-;-;-;-;-;-;-;- + 2637 + 1 1.996 102945.4 1.0 4276 4384 8660 SUDHL4_400M_050219_1,8662 SUDHL4_400M_050219_1,8662,TLWYRAPEV True True TLWYRAPEV 46.461568 567.800769031048 2648510.75 8660.0 ENST00000473078.1_1_7:92300738-92355023:-|nuORF;;ENSG00000105810|ENST00000424848|CDK6;;ENSG00000135446|ENST00000257904|CDK4;;nc|ENSG00000135446|P11802-2|CDK4 6.749938011169434 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8663 46.467 315.0 304960.0 25 0 84935.0 -1 0 83 662.4130310817005 661.4057546151005 1 662.4124023318291 MULTI CID FTMS 0 0 0 8660 325304.125 0.399245272772083 -7 0.3803749084472656 3 5 Y 1 -1 11.594 0.0 0.0 1.7529 0.0 0.0 480.3313202662708 0.0 480.3313202662708 0.0 8.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.7529 - 25 + 1 1.996 79134.7 1.0 4277 4384 8660 SUDHL4_400M_050219_1,8663 SUDHL4_400M_050219_1,8663, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8664 46.472 255.0 835780.0 25 0 92540.0 27806 PLPRFALLLLC 11 124 628.3826603915255 1254.750767849851 2 628.3826171755791 MULTI CID FTMS 0 0 0 8660 587125.5625 0.2541707062291623 -8 0.3949699401855469 4 Unmodified _PLPRFALLLLC_ ENST00000426231.5_2_X:153641633-153647973:+|nuORF 6.2057823575117 0.8458686499021061 5 H 1 11 8.7236 0.0 0.0 0.69525 0.0 0.0 1099.683581425826 0.0 1099.683581425826 0.0 4.119543704721593 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.69525 - 77 + 1 1.996 155591.0 1.0 4278 4384 8660 SUDHL4_400M_050219_1,8664 SUDHL4_400M_050219_1,8664,PLPRFALLLLC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8665 46.478 324.0 145250.0 25 0 47308.0 + 20578 LLNRRTRPRR 10 65 669.42128825395 1336.8280235747 2 669.4203979372978 MULTI CID FTMS 0 0 0 8660 269832.53125 0.2507601819836637 -2 0.0231971740722656 5 Unmodified _LLNRRTRPRR_ REV__ENSG00000164125|ENST00000585682|GASK1B;REV__nc|ENSG00000164125|Q6UWH4-2|GASK1B;REV__nc|ENSG00000164125|Q6UWH4-3|GASK1B 1.6526216038709556 0.7189921496796233 5 {I|L} 1 -1 10.713 0.0 0.0 0.8014 0.0 0.0 1205.732806755167 0.0 1205.732806755167 0.0 5.026975159433532 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.8014 + + 24 + 1 1.996 45022.8 1.0 4279 4384 8660 SUDHL4_400M_050219_1,8665 SUDHL4_400M_050219_1,8665,LLNRRTRPRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8667 46.482 21.0 2550900.0 25 0 645820.0 20059 LIRSRTKS 8 55 480.8010031072836 959.5874532813672 2 480.8004638552666 MULTI CID FTMS 0 0 0 8666 2816218.75 0.6310956165567265 1 -0.025146484375 1 Unmodified _LIRSRTKS_ ENSG00000114302|ENST00000265563|PRKAR2A 0.7936320650641473 0.8195151834710337 5 P 1 8 1.2591 0.0 0.0 0.13121 0.0 0.0 739.4550813104672 120.05148492984608 859.5065662403133 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.13121 - 2 + 1 1.996 47902.4 1.0 4280 4385 8666 SUDHL4_400M_050219_1,8667 SUDHL4_400M_050219_1,8667,LIRSRTKS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8668 46.49 432.0 147390.0 25 0 10044.0 -1 0 92 607.337884395867 1818.991823787801 3 607.3369628787041 MULTI CID FTMS 0 0 0 -1 0 2 5 {I|L}{I|L}D 3 -1 27.447 0.0 0.0 1.5089 0.0 0.0 0.0 1474.771797502898 1474.771797502898 10.83129812843433 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}D 1.5089 - 305 1 1.996 52036.1 1.0 4281 4385 8666 SUDHL4_400M_050219_1,8668 SUDHL4_400M_050219_1,8668, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8669 46.496 365.0 246790.0 25 0 30049.0 + 8043 ENLELLLML 9 124 544.3092768409791 1086.6040007487582 2 544.3099853396416 MULTI CID FTMS 0 0 0 8666 432830.71875 0.5231598202974445 6 -0.1492347717285156 3 Unmodified _ENLELLLML_ REV__nc|ENSG00000130402|O43707-3|ACTN4 13.90604991867851 0.4602628045680013 5 Y 1 -1 9.8329 0.0 0.0 0.90492 0.0 0.0 905.5283914731708 0.0 905.5283914731708 0.0 0.9594276311945648 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.90492 - 58 + 1 1.996 71835.2 1.0 4282 4385 8666 SUDHL4_400M_050219_1,8669 SUDHL4_400M_050219_1,8669,ENLELLLML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8670 46.503 381.0 213380.0 25 0 80282.0 30398 RARRRLLHKD 10 89 660.908366588045 1319.80218024289 2 660.9087402224541 MULTI CID FTMS 0 0 0 8666 380528.1875 0.7131710403724707 -6 0.32415771484375 4 Unmodified _RARRRLLHKD_ ENSG00000153822|ENST00000392671|KCNJ16 1.4819007175156935 0.719781833666733 5 M 1 10 6.9897 0.0 0.0 0.5296 0.0 0.0 695.4525841508963 490.2828463190063 1185.735430469903 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.5296 - 10 + 1 1.996 71291.4 1.0 4283 4385 8666 SUDHL4_400M_050219_1,8670 SUDHL4_400M_050219_1,8670,RARRRLLHKD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8672 46.513 361.0 40944.0 25 0 7559.4 -1 0 38 1057.798388659954 0 1057.798388659954 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.927 21818.9 1.0 4284 4386 8671 SUDHL4_400M_050219_1,8672 SUDHL4_400M_050219_1,8672, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8673 46.519 353.0 211210.0 25 0 19338.0 40655 VLEEIVTK 8 105 465.77754348724966 0 465.7778808474541 PEAK CID FTMS 0 0 0 8671 383011.09375 1.0 0 0.0 2 Unmodified _VLEEIVTK_ ENSG00000182196|ENST00000315580|ARL6IP4;ENST00000442210.2_1_12:123465790-123467130:+|nuORF;ENST00000539576.5_1_12:123466944-123467220:+|nuORF;ENST00000540708.5_1_12:123466944-123467130:+|nuORF;nc|ENSG00000182196|Q66PJ3-1|ARL6IP4;nc|ENSG00000182196|Q66PJ3-10|ARL6IP4;nc|ENSG00000182196|Q66PJ3-2|ARL6IP4;nc|ENSG00000182196|Q66PJ3-3|ARL6IP4;nc|ENSG00000182196|Q66PJ3-4|ARL6IP4;nc|ENSG00000182196|Q66PJ3-5|ARL6IP4;nc|ENSG00000182196|Q66PJ3-7|ARL6IP4;nc|ENSG00000182196|Q66PJ3-9|ARL6IP4 7.910154910731844 0.5650536163073903 5 {I|L} 1 7 4.6041 0.0 0.0 0.49531 0.0 0.0 559.3537797461806 254.07859216861564 813.4323719147962 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.49531 + + 14 + 1 1.927 62199.8 1.0 4285 4386 8671 SUDHL4_400M_050219_1,8673 SUDHL4_400M_050219_1,8673,VLEEIVTK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8675 46.523 13.0 3945500.0 25 0 1203700.0 20269 LLDRCGVF 8 67 461.7448733888451 921.4751938444904 2 461.7449828982353 MULTI CID FTMS 0 0 0 8674 6107239.0 1.0 0 0.0 1 Unmodified _LLDRCGVF_ ENSG00000175215|ENST00000398073|CTDSP2 5.760428011301431 0.7893668129297577 5 {I|L}{I|L}D 3 5 27.447 0.0 0.0 2.9786 0.0 0.0 0.0 577.2555642881027 577.2555642881027 4.387568628841265 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {I|L}{I|L}D 2.9786 + + 27 1 1.927 44700.1 1.0 4286 4387 8674 SUDHL4_400M_050219_1,8675 SUDHL4_400M_050219_1,8675,LLDRCGVF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8676 46.524 16.0 2472700.0 25 0 523200.0 + 40551 VKASLGVRGG 10 53 472.2878393395711 942.5611257459424 2 472.2880737185478 MULTI CID FTMS 0 0 0 8674 4296616.0 0.8658041771681925 6 -0.3728141784667969 2 Unmodified _VKASLGVRGG_ REV__ENST00000225174.7_1_10:81113628-81113721:+|nuORF 0.0 0.726636491536033 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.927 37315.4 1.0 4287 4387 8674 SUDHL4_400M_050219_1,8676 SUDHL4_400M_050219_1,8676,VKASLGVRGG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8677 46.526 0.78 73851000.0 25 0 8719100.0 + 28427 PTAAILAEL 9 85 449.7656302605325 897.5167075878651 2 449.7658264040947 MULTI CID FTMS 0 0 0 8674 137964256.0 1.0 0 0.0 3 Unmodified _PTAAILAEL_ REV__ENSG00000138823|ENST00000265517|MTTP 36.04419817259434 0.0971720506436186 5 {I|L}{I|L}DVA 5 -1 33.015 0.0 0.0 3.6785 0.0 0.0 0.0 383.1923417033526 383.1923417033526 -3.442428178462663 0.0 -3.442428178462663 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}{I|L}DVA 3.6785 - 222 1 1.927 49184.2 1.0 4288 4387 8674 SUDHL4_400M_050219_1,8677 SUDHL4_400M_050219_1,8677,PTAAILAEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8678 46.529 186.0 297260.0 25 0 42949.0 34428 SLVVPGIDLP 10 85 505.3002203776944 0 505.3003417849541 PEAK CID FTMS 0 0 0 8674 1094501.25 1.0 0 0.0 4 Unmodified _SLVVPGIDLP_ ENSG00000078018|ENST00000682079|MAP2;nc|ENSG00000078018|P11137-3|MAP2 15.847184025352805 0.3304572136216667 5 V 1 9 6.9897 0.0 0.0 0.69302 0.0 0.0 344.23110374191384 562.2640474908811 906.495151232795 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.69302 + + 23 + 1 1.927 48966.5 1.0 4289 4387 8674 SUDHL4_400M_050219_1,8678 SUDHL4_400M_050219_1,8678,SLVVPGIDLP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8679 46.531 94.0 917920.0 25 0 240390.0 + 20598 LLPEGPPAI 9 55 906.529585355398 905.522308888798 1 906.5286132693292 MULTI CID FTMS 0 0 0 8674 814967.0 0.6252931539999235 7 -0.4443359375 5 Unmodified _LLPEGPPAI_ ENSG00000051108|ENST00000439977|HERPUD1;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 48.345845343767074 0.0439967357579942 5 {I|L}{I|L}PEGP 6 3 54.641 0.0 0.0 6.0342 0.0 0.0 0.0 296.1617525690063 296.1617525690063 28.750612633917 0.0 0.0 0.0 0 1.274227503252014 0.0 0.9247425010840048 0.0 + {I|L}{I|L}PEGP 6.0342 + + 261 + 1 1.927 63487.1 1.0 4290 4387 8674 SUDHL4_400M_050219_1,8679 SUDHL4_400M_050219_1,8679,LLPEGPPAI True True LLPEGPPAI 46.53118 906.528613269329 25783082.5 8674.0 nc|ENSG00000051108|Q15011-4|HERPUD1;;nc|ENSG00000051108|Q15011-2|HERPUD1;;nc|ENSG00000051108|Q15011-3|HERPUD1;;ENSG00000051108|ENST00000439977|HERPUD1 4.810732046763103 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8680 46.537 301.0 163840.0 25 0 19602.0 + -1 GLVAGGIIGA 10 69 827.0032226443291 0 827.0032226443291 PEAK CID FTMS 0 0 0 -1 0 6 ENSG00000113845|ENST00000494664|TIMMDC1 5 G{I|L}{I|L}GGA 6 -1 32.652 0.0 0.0 1.9765 0.0 0.0 914.5518421619018 266.14913126735564 1180.7009734292574 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{I|L}{I|L}GGA 1.9765 - 1074 + 1 1.927 42432.5 1.0 4291 4387 8674 SUDHL4_400M_050219_1,8680 SUDHL4_400M_050219_1,8680, False False GLVAGGIIGA 46.536718 827.003222644329 6071553.5 8674.0 ENSG00000113845|ENST00000494664|TIMMDC1 4.390851656595866 1.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8681 46.542 292.0 291580.0 25 0 22175.0 + 16944 KILPTLEAV 9 107 492.310392572323 982.606232211446 2 492.8119079470634 MULTI CID FTMS 0 0 0 8674 441568.4375 0.5504823726850346 -5 0.0946502685546875 7 Unmodified _KILPTLEAV_ ENSG00000143621|ENST00000361891|ILF2 29.081581746732265 0.1611639662936252 5 {I|L}{I|L}K[TP]{I|L}E{[VA]|[{I|L}G]} 9 2 + 49.485 0.0 0.0 5.0361 5.0361 88.684 0.0 0.0 0.0 12.029842106403583 7.147642715192504 7.147642715192504 12.029842106403583 0 0.9247425010840048 1.6989700043360187 0.6307196863200843 0.3807196863200844 {I|L}{I|L}K[TP]{I|L}E{[VA]|[{I|L}G]};[TP]{I|L}[K{I|L}]{I|L}E{[VA]|[{I|L}G]};[TP]{I|L}E{I|L}[K{I|L}]{[VA]|[{I|L}G]};[{I|L}T]P[K{I|L}]{I|L}E{[VA]|[{I|L}G]};[{I|L}T]PE{I|L}[K{I|L}]{[VA]|[{I|L}G]};{[QN]|[E{I|L}]|[KN]}PT{I|L}[K{I|L}]{[VA]|[{I|L}G]} 5.0361;3.8118;3.1946;3.142;2.5248;2.5138 -;-;-;-;-;- 306 1 1.927 68105.7 1.0 4292 4387 8674 SUDHL4_400M_050219_1,8681 SUDHL4_400M_050219_1,8681,KILPTLEAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8682 46.548 306.0 40440.0 25 0 6145.1 -1 0 32 1033.159960925579 0 1033.159960925579 PEAK CID FTMS 0 0 0 -1 0 8 5 HH 2 -1 10.969 0.0 0.0 0.53137 0.0 0.0 1165.7855457751832 621.3563936822874 1787.1419394574705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HH 0.53137 - 9 + 1 1.927 20057.6 1.0 4293 4387 8674 SUDHL4_400M_050219_1,8682 SUDHL4_400M_050219_1,8682, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8684 46.552 23.0 3571300.0 25 0 593640.0 + -1 LLVGCMLM 8 69 468.7392096127669 935.4638662923338 2 468.7391235232353 MULTI CID FTMS 0 0 0 8683 3269807.25 0.7349325727044562 1 -0.01116943359375 1 Carbamidomethyl (C) _LLVGC(Carbamidomethyl (C))MLM_ REV__ENSG00000046889|ENST00000288368|PREX2;REV__ENST00000517617.1_1_8:68864752-69023167:+|nuORF;REV__ENST00000529398.5_1_8:68864629-69017594:+|nuORF;REV__nc|ENSG00000046889|Q70Z35-3|PREX2;REV__nc|ENSG00000046889|Q70Z35-4|PREX2 17.086550045450526 0.6584923310065985 5 {I|L}{I|L}D 3 -1 50.177 0.0 0.0 5.3639 0.0 0.0 0.0 591.247793788633 591.247793788633 27.95880017344075 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {I|L}{I|L}D 5.3639 - 33 + 1 1.927 72339.1 1.0 4294 4388 8683 SUDHL4_400M_050219_1,8684 SUDHL4_400M_050219_1,8684,LLVGCMLM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8685 46.553 62.0 893450.0 25 0 192400.0 + 23519 LTKMKKTK 8 60 489.3140956704832 976.6136384077664 2 489.3138915896416 MULTI CID FTMS 0 0 0 8683 548217.25 0.1951275007042984 1 -0.01116943359375 2 Unmodified _LTKMKKTK_ REV__ENST00000225728.7_1_17:6547672-6547756:-|nuORF 0.7936320650641473 0.8195151834710337 5 P 1 -1 1.5938 0.0 0.0 0.1632 0.0 0.0 778.4950756409679 98.03817926578358 876.5332549067515 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.1632 - 2 + 1 1.927 51423.8 1.0 4295 4388 8683 SUDHL4_400M_050219_1,8685 SUDHL4_400M_050219_1,8685,LTKMKKTK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8686 46.559 307.0 163620.0 25 0 11158.0 37878 TLVTVRTLFS 10 84 568.8349866125728 1135.6554202919456 2 568.8343994021416 MULTI CID FTMS 0 0 0 8683 425204.15625 1.0 0 0.0 3 Unmodified _TLVTVRTLFS_ ENST00000487951.1_1_21:43963642-43967352:+|nuORF 3.5964929083625545 0.7100006075494749 5 V 1 9 10.089 0.0 0.0 0.88835 0.0 0.0 1018.5757064021004 0.0 1018.5757064021004 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.88835 + + 30 + 1 1.927 44946.3 1.0 4296 4388 8683 SUDHL4_400M_050219_1,8686 SUDHL4_400M_050219_1,8686,TLVTVRTLFS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8688 46.567 366.0 377010.0 25 0 69128.0 + -1 LLAAFVFLLCV 11 125 633.3695789979172 1264.7246050626345 2 633.3694946169853 MULTI CID FTMS 0 0 0 8687 341841.65625 0.2727988298930893 9 -0.9187088012695312 1 Carbamidomethyl (C) _LLAAFVFLLC(Carbamidomethyl (C))V_ REV__ENSG00000101958|ENST00000218075|GLRA2;REV__nc|ENSG00000101958|P23416-2|GLRA2;REV__nc|ENSG00000101958|P23416-3|GLRA2 6.723162845929126 0.8434276150410019 5 H 1 -1 8.7724 0.0 0.0 0.69362 0.0 0.0 1109.657632261656 0.0 1109.657632261656 0.0 0.0965257759769322 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.69362 - 33 + 1 1.927 110510.4 1.0 4297 4389 8687 SUDHL4_400M_050219_1,8688 SUDHL4_400M_050219_1,8688,LLAAFVFLLCV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8689 46.575 418.0 241910.0 25 0 35509.0 + 34312 SLRRKVEGLPQ 11 101 641.8822412905197 1281.7499296478393 2 641.8824340701103 MULTI CID FTMS 0 0 0 8687 255026.140625 0.3636998648119993 10 -1.02886962890625 2 Unmodified _SLRRKVEGLPQ_ REV__ENSG00000164935|ENST00000297581|DCSTAMP 5.296884461304476 0.8501568894076437 5 V 1 -1 9.0908 0.0 0.0 0.70925 0.0 0.0 1164.670589598326 0.0 1164.670589598326 0.0 1.131981886835387 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.70925 + + 86 + 1 1.927 79726.7 1.0 4298 4389 8687 SUDHL4_400M_050219_1,8689 SUDHL4_400M_050219_1,8689,SLRRKVEGLPQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8690 46.582 430.0 627990.0 25 0 50960.0 + 28429 PTAARRLE 8 152 457.2644776817437 912.5144024302874 2 457.2640869021416 MULTI CID FTMS 0 0 0 8687 256696.921875 0.813991569441813 -3 0.05572509765625 3 Unmodified _PTAARRLE_ REV__ENST00000555249.1_2_14:75151343-75179699:-|nuORF;REV__ENST00000556589.5_1_14:75158912-75179699:-|nuORF;REV__ENST00000556860.1_1_14:75168472-75179699:-|nuORF;REV__ENST00000557401.5_1_14:75158912-75179699:-|nuORF 26.34127834903884 0.4900704351052977 5 [TP]AAV 5 -1 49.922 0.0 0.0 5.4708 0.0 0.0 0.0 470.24826408483744 470.24826408483744 33.02256226852258 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.3979400086720375 0.0 [TP]AAV 5.4708 - 336 1 1.927 208691.9 1.0 4299 4389 8687 SUDHL4_400M_050219_1,8690 SUDHL4_400M_050219_1,8690,PTAARRLE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8691 46.59 446.0 244440.0 25 0 29583.0 -1 0 112 981.8015325416408 2942.3827682251217 3 982.4704467654228 MULTI CID FTMS 0 0 0 8687 189549.78125 0.5541766398050513 -2 0.0397109985351562 4 5 D[PS]QS{[QG]|[NA]} 7 -1 14.001 0.0 0.0 0.47585 0.0 0.0 2225.094939711253 0.0 2225.094939711253 0.0 -1.0480273685767116 -1.0480273685767116 0.0 0 0.8807196863200843 0.0 0.0 0.3494850021680094 D[PS]QS{[QG]|[NA]} 0.47585 - 706 + 1 1.927 77441.5 1.0 4300 4389 8687 SUDHL4_400M_050219_1,8691 SUDHL4_400M_050219_1,8691, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8692 46.599 472.0 67995.0 25 0 9587.6 -1 0 65 1118.506762683392 0 1118.506762683392 PEAK CID FTMS 0 0 0 -1 0 5 5 PEY{M(Oxidation (M))|F}[WQ]QA 8 -1 18.849 0.0 0.0 0.84338 0.0 0.0 605.2860340564342 577.2078341119749 1182.493868168409 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PEY{M(Oxidation (M))|F}[WQ]QA 0.84338 - 198 + 1 1.927 27824.2 1.0 4301 4389 8687 SUDHL4_400M_050219_1,8692 SUDHL4_400M_050219_1,8692, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8694 46.61 473.0 119800.0 25 0 12440.0 -1 0 80 924.9798028313396 1847.945052729479 2 925.4799682497978 MULTI CID FTMS 0 0 0 8693 84559.4375 0.4811896234972727 1 -0.0285110473632812 1 5 [TP]AAVD 6 -1 18.416 0.0 0.0 0.99659 0.0 0.0 0.0 1290.6504720012165 1290.6504720012165 5.0514997831990645 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [TP]AAVD 0.99659 - 287 1 1.896 40970.6 1.0 4302 4390 8693 SUDHL4_400M_050219_1,8694 SUDHL4_400M_050219_1,8694, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8695 46.618 459.0 265070.0 25 0 12538.0 + 20083 LIWGTDSIT 9 101 1005.5238208366552 1004.516544370055 1 1005.524890124798 MULTI CID FTMS 0 0 0 8693 242970.390625 0.5435719433757764 9 -0.9890174865722656 2 Unmodified _LIWGTDSIT_ REV__ENSG00000066813|ENST00000329697|ACSM2B;REV__ENSG00000183747|ENST00000573854|ACSM2A 77.98433622928108 0.0180125044636492 5 {I|L}{I|L}WEGSVTT 9 -1 + 75.746 0.0 0.0 7.5405 7.5405 91.464 0.0 0.0 0.0 21.12704280191288 33.74963556272478 21.12704280191288 7.92719286378599 0 1.1989700043360187 1.3979400086720375 1.424742501084005 0.0 {I|L}{I|L}WEGSVTT;{I|L}{I|L}EWGSVTT;{I|L}{I|L}WEGSS{I|L}T;{I|L}{I|L}N[NS]GSVTT;{I|L}{I|L}[PA]{M(Oxidation (M))|F}GSVTT;{I|L}{I|L}WEGSST{I|L};{I|L}{I|L}EWGSS{I|L}T;{I|L}{I|L}N[NS]GSS{I|L}T;{I|L}{I|L}N[DC]{I|L}{I|L}TT;{I|L}{I|L}WT[DG]VTT 7.5405;6.7514;6.747;6.4779;6.3763;6.074;5.9579;5.9447;5.6112;5.6073 -;-;-;-;-;-;-;-;-;- 3858 1 1.896 82846.9 1.0 4303 4390 8693 SUDHL4_400M_050219_1,8695 SUDHL4_400M_050219_1,8695,LIWGTDSIT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8696 46.627 495.0 400170.0 25 0 39472.0 + 17254 KLNDLIQRL 9 115 556.842832678348 1111.671112423496 2 556.8433715701103 MULTI CID FTMS 0 0 0 8693 193966.28125 0.3992120751258897 -1 0.0398521423339843 3 Unmodified _KLNDLIQRL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 110.5527297667825 0.0053998527608258 5 K{I|L}ND{I|L}{I|L}QR{I|L} 9 0 + 110.33 0.0 0.0 9.9244 9.9244 85.876 0.0 0.0 0.0 7.257724967479845 0.2227639471115168 0.2227639471115168 0.2227639471115168 0 2.6549471895720984 1.0 0.3807196863200844 1.416386562212267 + + K{I|L}ND{I|L}{I|L}QR{I|L};K{I|L}ND{I|L}{I|L}Q{I|L}R;{I|L}KND{I|L}{I|L}QR{I|L};{I|L}KND{I|L}{I|L}Q{I|L}R;K{I|L}N{I|L}D{I|L}QR{I|L};K{I|L}N{I|L}D{I|L}Q{I|L}R;K{I|L}GGD{I|L}{I|L}QR{I|L};K{I|L}ND{I|L}{I|L}[AG]R{I|L};K{I|L}GGD{I|L}{I|L}Q{I|L}R;K{I|L}ND{I|L}{I|L}[AG]{I|L}R 9.9244;9.9044;9.2715;9.2515;9.2038;9.1838;9.0961;9.0961;9.076;9.076 +;-;-;-;-;-;-;-;-;- + 903 + 1 1.896 151302.3 1.0 4304 4390 8693 SUDHL4_400M_050219_1,8696 SUDHL4_400M_050219_1,8696,KLNDLIQRL True True KLNDLIQRL 46.62714 556.84337157011 2808096.5 8693.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 5.702506224314372 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8698 46.631 55.0 603200.0 25 0 137490.0 + 20824 LLWWSGCS 8 57 476.2226069478161 950.4306609624324 2 476.2230102419853 MULTI CID FTMS 0 0 0 8697 744979.5625 0.3326397102784918 4 -0.4841270446777344 1 Unmodified _LLWWSGCS_ REV__ENSG00000152270|ENST00000282096|PDE3B;REV__ENST00000534317.1_1_11:14665864-14793584:+|nuORF;REV__nc|ENSG00000152270|Q13370-2|PDE3B 5.760428011301431 0.7893668129297577 5 {I|L}{I|L}D 3 -1 27.447 0.0 0.0 2.8879 0.0 0.0 0.0 606.2119774509666 606.2119774509666 20.457574905606748 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}D 2.8879 - 9 1 1.896 29640.5 1.0 4305 4391 8697 SUDHL4_400M_050219_1,8698 SUDHL4_400M_050219_1,8698,LLWWSGCS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8699 46.641 536.0 237260.0 25 0 23958.0 + 1828 ALTGYLHTI 9 132 494.7765158632682 987.5384787933364 2 494.7769042849541 MULTI CID FTMS 0 0 0 8697 244726.375 0.7533495401209381 -1 0.0285110473632812 2 Unmodified _ALTGYLHTI_ ENSG00000118246|ENST00000402774|FASTKD2;ENST00000471788.1_1_2:207651391-207655428:+|nuORF;ENST00000487777.5_1_2:207631381-207653673:+|nuORF;nc|ENSG00000118246|Q9NYY8-2|FASTKD2 85.35673624503755 0.0162188719545379 5 [{I|L}A]TGY{I|L}HT{I|L} 9 0 + 75.446 0.0 0.0 7.6398 7.6398 96.902 0.0 0.0 0.0 35.580594958967176 24.00048099239605 24.00048099239605 25.74472068836189 0 0.75 2.0 2.394599018282542 0.0 + + [{I|L}A]TGY{I|L}HT{I|L};[{I|L}A]T[HT]{I|L}HPV;[H{I|L}]YGTT{I|L}A{I|L};[{I|L}A]{[QG]|[NA]}{[DS]|[MA]|[CV]|TT}T{I|L}A{I|L};[{I|L}A]{I|L}H{[DS]|[MA]|[CV]|TT}HPV;[{I|L}A]T[WR]GTA{I|L};[H{I|L}]YGT{I|L}TA{I|L};[{I|L}A]{[QG]|[NA]}{[DS]|[MA]|[CV]|TT}{I|L}TA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}WGTT{I|L}A{I|L};[H{I|L}]T{I|L}YGTA{I|L} 7.6398;5.0328;3.8568;3.8157;3.7817;3.6735;3.3692;3.328;3.2639;3.1619 +;-;-;-;-;-;-;-;-;- + 1098 + 1 1.896 97774.7 1.0 4306 4391 8697 SUDHL4_400M_050219_1,8699 SUDHL4_400M_050219_1,8699,ALTGYLHTI True True ALTGYLHTI 46.64099 494.776904284954 2529064.25 8697.0 nc|ENSG00000118246|Q9NYY8-2|FASTKD2;;ENST00000471788.1_1_2:207651391-207655428:+|nuORF;;ENSG00000118246|ENST00000402774|FASTKD2;;ENST00000487777.5_1_2:207631381-207653673:+|nuORF 5.746877988179524 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8700 46.645 208.0 317580.0 25 0 57286.0 + + 33838 SIIDTELKV 9 89 509.2951022412033 1016.5756515492068 2 509.2943603396416 MULTI CID FTMS 0 0 0 8697 238676.453125 0.768450198238741 -1 0.0285110473632812 3 Unmodified _SLEELLSKV_ nc|ENSG00000071539|Q15645-2|TRIP13;ENST00000512024.5_1_5:893053-908577:+|nuORF;ENSG00000071539|ENST00000166345|TRIP13 30.63653989081413 0.1413794767160703 5 {[TV]|[{I|L}S]}{I|L}D{[ET]|[MV]}{I|L}KV 9 -1 + 46.494 0.0 0.0 4.5736 4.5736 88.279 0.0 0.0 0.0 10.40013393002674 6.048484084954566 6.048484084954566 17.47783324549136 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}D{[ET]|[MV]}{I|L}KV;{[QN]|[E{I|L}]|[KN]}TD{I|L}K[W{I|L}];{[QN]|[E{I|L}]|[KN]}SE{I|L}K[W{I|L}];{[ET]|[MV]}D{I|L}{I|L}K[W{I|L}];{[TV]|[{I|L}S]}{I|L}G[NS]K[W{I|L}];{[TV]|[{I|L}S]}{I|L}{[HG]|PP}[KC]{M(Oxidation (M))|F}{I|L};{[ET]|[MV]}{I|L}D{I|L}K[W{I|L}];{[TV]|[{I|L}S]}{I|L}[{I|L}V]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}C{I|L};{[ET]|[MV]}VE{I|L}K[W{I|L}];{[QN]|[E{I|L}]|[KN]}K[NS]K[W{I|L}] 4.5736;2.8543;2.6032;2.4758;2.4505;2.3376;1.9377;1.8474;1.6866;0.74436 -;-;-;-;-;-;-;-;-;- 310 + 1 1.896 55854.5 1.0 4307 4391 8697 SUDHL4_400M_050219_1,8700 SUDHL4_400M_050219_1,8700,SLEELLSKV False False SIIDTELKV 46.64493 509.294360339642 1633055.375 8697.0 nc|ENSG00000071539|Q15645-2|TRIP13;;ENST00000512024.5_1_5:893053-908577:+|nuORF;;ENSG00000071539|ENST00000166345|TRIP13 4.443167686462402 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8701 46.655 584.0 16096.0 25 0 3734.1 -1 0 23 1063.322192370892 0 1063.322192370892 PEAK CID FTMS 0 0 0 -1 0 4 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.896 18089.4 1.0 4308 4391 8697 SUDHL4_400M_050219_1,8701 SUDHL4_400M_050219_1,8701, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8702 46.666 592.0 79435.0 25 0 10843.0 -1 0 80 745.3348064671259 2232.9825900015776 3 745.6708862185478 MULTI CID FTMS 0 0 0 8697 163354.546875 1.0 0 0.0 5 5 Y{M(Oxidation (M))|F}ANQQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}[NP] 11 -1 45.265 0.0 0.0 2.0271 0.0 0.0 830.3955061166151 0.0 830.3955061166151 0.0 27.22793842753653 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 Y{M(Oxidation (M))|F}ANQQ{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}[NP] 2.0271 - 1229 + 1 1.896 41794.5 1.0 4309 4391 8697 SUDHL4_400M_050219_1,8702 SUDHL4_400M_050219_1,8702, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8703 46.676 587.0 283700.0 25 0 25510.0 + 14356 IEVDGKQVEL 10 157 565.3088157369147 0 565.3082153201103 PEAK CID FTMS 0 0 0 8697 165688.375 0.4921072520837179 -1 0.0285110473632812 6 Unmodified _IEVDGKQVEL_ ENSG00000067560|ENST00000418115|RHOA;ENSG00000143878|ENST00000272233|RHOB;ENSG00000155366|ENST00000339083|RHOC 59.012897905743536 0.0254283814801067 5 E{I|L}VEVQD 7 8 54.69 0.0 0.0 4.8458 0.0 0.0 131.09369240957295 182.0941408746704 313.1878332842433 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 1.9960762528683704 0.9802046884880936 E{I|L}VEVQD 4.8458 - 2343 + 1 1.896 130044.6 1.0 4310 4391 8697 SUDHL4_400M_050219_1,8703 SUDHL4_400M_050219_1,8703,IEVDGKQVEL True True IEVDGKQVEL 46.675848 565.30821532011 1902495.5 8697.0 ENSG00000155366|ENST00000339083|RHOC;;ENSG00000067560|ENST00000418115|RHOA;;ENSG00000143878|ENST00000272233|RHOB 3.5066027641296387 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8704 46.679 147.0 54442.0 25 0 10549.0 + -1 TCNYCQCHENW 11 19 786.2756835818291 0 786.2756835818291 PEAK CID FTMS 0 0 0 -1 0 7 3 Carbamidomethyl (C) _TC(Carbamidomethyl (C))NYC(Carbamidomethyl (C))QC(Carbamidomethyl (C))HENW_ REV__ENST00000395032.6_2_11:59831787-59834506:+|nuORF 0.0 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.896 17687.5 1.0 4311 4391 8697 SUDHL4_400M_050219_1,8704 SUDHL4_400M_050219_1,8704,TCNYCQCHENW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8705 46.69 663.0 29256.0 25 0 6226.3 -1 0 37 1104.910693347454 0 1104.910693347454 PEAK CID FTMS 0 0 0 -1 0 8 5 C 1 -1 4.6041 0.0 0.0 0.20854 0.0 0.0 1183.3468250720582 918.4521578424436 2101.7989829145017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.20854 - 1 + 1 1.896 20483.5 1.0 4312 4391 8697 SUDHL4_400M_050219_1,8705 SUDHL4_400M_050219_1,8705, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8707 46.695 19.0 2074900.0 25 0 445710.0 13746 HRLRQRGLW 9 50 611.3559208962663 1220.6972888593325 2 611.3560668826103 MULTI CID FTMS 0 0 0 8706 3188770.0 0.8731035017151876 5 -0.6240997314453125 1 Unmodified _HRLRQRGLW_ ENST00000528797.5_1_11:57413095-57413371:-|nuORF 0.6014990680409731 0.8936861360942873 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.866 39402.9 1.0 4313 4392 8706 SUDHL4_400M_050219_1,8707 SUDHL4_400M_050219_1,8707,HRLRQRGLW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8708 46.696 81.0 1365700.0 25 0 287690.0 + 28224 PQPLALRSMLL 11 83 619.8690591047385 1237.723565276277 2 619.8695556521416 MULTI CID FTMS 0 0 0 8706 2216591.75 1.0 0 0.0 2 Unmodified _PQPLALRSMLL_ REV__ENSG00000095752|ENST00000264563|IL11;REV__nc|ENSG00000095752|P20809-2|IL11 1.1933415558491238 0.8695176722560516 5 K 1 -1 1.1092 0.0 0.0 0.08962 0.0 0.0 779.4479437936583 327.14667688541255 1106.5946206790709 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.08962 - 5 + 1 1.866 85090.9 1.0 4314 4392 8706 SUDHL4_400M_050219_1,8708 SUDHL4_400M_050219_1,8708,PQPLALRSMLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8709 46.698 78.0 651140.0 25 0 99124.0 + -1 VLCRLVCLSI 10 68 588.3348062467425 1174.6550595602848 2 588.3354980349541 MULTI CID FTMS 0 0 0 8706 933109.375 0.7112928710014238 6 -0.7869682312011719 3 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))RLVCLSI_ REV__ENST00000447069.5_3_2:201677557-201677948:+|nuORF 3.944395688203298 0.708391353636983 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.866 45983.5 1.0 4315 4392 8706 SUDHL4_400M_050219_1,8709 SUDHL4_400M_050219_1,8709,VLCRLVCLSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8710 46.7 97.0 256940.0 25 0 32769.0 + 7658 EKILSALYLAS 11 51 604.3482024849948 1206.6818520367897 2 604.3490478396416 MULTI CID FTMS 0 0 0 8706 896874.375 0.4814745895988264 5 -0.6240997314453125 4 Unmodified _EKILSALYLAS_ REV__ENSG00000137124|ENST00000377698|ALDH1B1 1.0714618166137932 0.8700927088084459 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.866 25258.8 1.0 4316 4392 8706 SUDHL4_400M_050219_1,8710 SUDHL4_400M_050219_1,8710,EKILSALYLAS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8711 46.708 449.0 306900.0 25 0 28320.0 + 23511 LTKKKWKK 8 148 530.3531177576416 1058.691682582083 2 530.3537475466728 MULTI CID FTMS 0 0 0 8706 485521.40625 0.4481922574624067 4 -0.5157470703125 5 Unmodified _LTKKKWKK_ REV__ENST00000572218.5_2_17:44107443-44107545:-|nuORF 2.577480529830294 0.808687252328423 5 [{I|L}T]A 3 -1 23.395 0.0 0.0 2.2098 0.0 0.0 0.0 770.4994546459574 770.4994546459574 5.170642046134201 0.0 0.0 0.0 0 0.0 2.0 0.1344005005252609 0.0 [{I|L}T]A 2.2098 - 1350 1 1.866 112329.0 1.0 4317 4392 8706 SUDHL4_400M_050219_1,8711 SUDHL4_400M_050219_1,8711,LTKKKWKK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8712 46.712 200.0 293830.0 25 0 64590.0 40835 VLNFFLLSFPI 11 65 655.3823275608848 1308.7501021885696 2 655.3824951052666 MULTI CID FTMS 0 0 0 8706 425947.875 0.5921399442402825 -2 0.091888427734375 6 Unmodified _VLNFFLLSFPI_ ENST00000591445.1_1_17:67501802-67515615:+|nuORF 2.9952420565917617 0.861016188266951 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.866 59254.2 1.0 4318 4392 8706 SUDHL4_400M_050219_1,8712 SUDHL4_400M_050219_1,8712,VLNFFLLSFPI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8713 46.721 520.0 110590.0 25 0 22898.0 20656 LLQKDKDRRK 10 91 650.396263006795 1298.77797308039 2 650.3966552615166 MULTI CID FTMS 0 0 0 8706 384350.03125 0.4880540030726384 -8 0.2429046630859375 7 Unmodified _LLQKDKDRRK_ ENSG00000075223|ENST00000265361|SEMA3C 1.6526216038709556 0.7189921496796233 5 {I|L} 1 9 10.278 0.0 0.0 0.79133 0.0 0.0 1167.6828630723803 0.0 1167.6828630723803 0.0 0.5998765853837451 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.79133 + + 8 + 1 1.866 57570.2 1.0 4319 4392 8706 SUDHL4_400M_050219_1,8713 SUDHL4_400M_050219_1,8713,LLQKDKDRRK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8714 46.731 536.0 191560.0 25 0 17411.0 + 30944 RKLLSRPDRG 10 118 599.3617691859602 1196.7089854387202 2 599.3627197146416 MULTI CID FTMS 0 0 0 8706 344899.9375 0.8381146941880918 -2 0.091888427734375 8 Unmodified _RKLLSRPDRG_ REV__ENSG00000206422|ENST00000383467|LRRC30 5.731851221503515 0.7001233259664787 5 T 1 -1 4.0938 0.0 0.0 0.34209 0.0 0.0 597.3942404209453 495.2299898736938 1092.6242302946391 0.0 0.0 0.0 0.0 0 0.0 0.0 0.25 0.0 T 0.34209 - 123 + 1 1.866 78672.6 1.0 4320 4392 8706 SUDHL4_400M_050219_1,8714 SUDHL4_400M_050219_1,8714,RKLLSRPDRG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8715 46.741 592.0 253460.0 25 0 33181.0 + 31005 RLFDDVPQV 9 124 544.7903425918389 1087.5661322504775 2 544.7906371951103 MULTI CID FTMS 0 0 0 8706 274108.375 1.0 0 0.0 9 Unmodified _RLFDDVPQV_ ENSG00000164818|ENST00000297440|DNAAF5;ENST00000438961.1_1_7:766900-790557:+|nuORF;nc|ENSG00000164818|Q86Y56-2|DNAAF5 39.94969957227396 0.0757326808254658 5 DVPQV 5 4 33.456 0.0 0.0 3.0762 0.0 0.0 531.2817613977531 0.0 531.2817613977531 0.0 6.03286222516239 0.0 0.0 0 0.968765315847925 0.0 0.3054621874040891 0.0 + DVPQV 3.0762 + + 253 1 1.866 125258.1 1.0 4321 4392 8706 SUDHL4_400M_050219_1,8715 SUDHL4_400M_050219_1,8715,RLFDDVPQV True True RLFDDVPQV 46.741156 544.79063719511 1993622.75 8706.0 nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENST00000438961.1_1_7:766900-790557:+|nuORF;;ENSG00000164818|ENST00000297440|DNAAF5 6.306996981302897 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8716 46.752 638.0 229260.0 25 0 29531.0 + 14804 ILDSGIYRI 9 150 525.304060019617 1048.593567106034 2 525.3044311404228 MULTI CID FTMS 0 0 0 8706 251865.046875 1.0 0 0.0 10 Unmodified _ILDSGIYRI_ ENSG00000110756|ENST00000349215|HPS5;nc|ENSG00000110756|Q9UPZ3-2|HPS5 43.77239144664712 0.0547478964384323 5 {I|L}{I|L}DS{I|L}G{I|L}RY 9 3 + 83.575 0.0 0.0 7.9702 7.9702 85.951 0.0 0.0 0.0 28.536830322726185 2.390690719683093 2.390690719683093 1.249387366082999 0 1.1643943297944483 2.0 0.805462187404089 0.2887254899964357 {I|L}{I|L}DS{I|L}G{I|L}RY;{I|L}{I|L}DSG{I|L}{I|L}RY;{I|L}{I|L}DS{I|L}G[YR]{I|L};{I|L}{I|L}DSG{I|L}[YR]{I|L};{I|L}{I|L}D{I|L}SG{I|L}RY;{I|L}{I|L}D{I|L}SG[YR]{I|L};{I|L}{I|L}{I|L}DSG{I|L}RY;{I|L}{I|L}{I|L}DSG[YR]{I|L};{I|L}{I|L}DS{I|L}H[{I|L}A][PA];{I|L}{I|L}D{I|L}H[RP]SV 7.9702;7.8511;7.7422;7.6231;7.5152;7.2872;7.0846;6.8566;5.7068;5.26 -;-;-;+;-;-;-;-;-;- + 888 + 1 1.866 113498.2 1.0 4322 4392 8706 SUDHL4_400M_050219_1,8716 SUDHL4_400M_050219_1,8716,ILDSGIYRI True True ILDSGIYRI 46.752279 525.304431140423 1036201.8125 8706.0 nc|ENSG00000110756|Q9UPZ3-2|HPS5;;ENSG00000110756|ENST00000349215|HPS5 0.0092572371164957 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8717 46.764 665.0 250640.0 25 0 20063.0 -1 0 132 672.3929584816135 671.3856820150135 1 672.4122802615166 MULTI CID FTMS 0 0 0 -1 0 11 5 {[QN]|[E{I|L}]|[KN]}{I|L}GGA{I|L} 7 -1 + 75.259 0.0 0.0 11.209 11.209 86.176 0.0 0.0 0.0 18.96695058365239 16.32023214705405 16.32023214705405 0.2996322337744317 0 1.2884157219675485 1.3010299956639813 1.298455006504028 0.6694451763165201 {[QN]|[E{I|L}]|[KN]}{I|L}GGA{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}NA{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}GQ{I|L};{[QN]|[E{I|L}]|[KN]}G{I|L}GA{I|L};{[QN]|[E{I|L}]|[KN]}GQ{I|L}{I|L};{[QG]|[NA]}{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}G{I|L}Q{I|L};{[QG]|[NA]}E{I|L}{I|L}{I|L};{I|L}{I|L}ENA{I|L};{[QG]|[NA]}{I|L}{I|L}E{I|L} 11.209;11.165;9.9964;9.3515;8.5868;8.3844;8.1384;7.4877;7.2465;7.2254 -;-;-;-;-;-;-;-;-;- 389 1 1.866 130278.6 1.0 4323 4392 8706 SUDHL4_400M_050219_1,8717 SUDHL4_400M_050219_1,8717, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8718 46.777 703.0 254330.0 25 0 29485.0 20736 LLSLIHLV 8 152 454.3022934028788 906.5900338725576 2 454.3019592165947 MULTI CID FTMS 0 0 0 8706 207374.75 0.0331154537453403 12 -1.4602317810058594 12 Unmodified _LLSLIHLV_ ENSG00000180658|ENST00000315453|OR2A4;ENSG00000243896|ENST00000641841|OR2A7 42.96799951952854 0.1846367511955703 5 [VP]KVGPV{I|L}V 9 7 + 56.492 0.0 0.0 6.2313 6.2313 82.717 0.0 0.0 0.0 12.67606240177031 39.237368371015776 12.67606240177031 1.6047058266281835 0 0.805462187404089 1.3010299956639813 0.0 0.2396518287104437 [VP]KVGPV{I|L}V;[VP]GVKPV{I|L}V;[VP]GVPKV{I|L}V;[PG]VVKPV{I|L}V;[VP]GVPVK{I|L}V;[{I|L}P]AAKPV{I|L}V;[PG]VVPKV{I|L}V;[VP]GVP{I|L}VKV;[VP]{I|L}[KP]AA{I|L}V;[VP]K[{I|L}P]AA{I|L}V 6.2313;6.0543;5.191;4.6539;4.4201;3.8039;3.7907;3.587;3.5422;3.4745 -;-;-;-;-;-;-;-;-;- 638 1 1.866 138101.2 1.0 4324 4392 8706 SUDHL4_400M_050219_1,8718 SUDHL4_400M_050219_1,8718,LLSLIHLV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8719 46.791 800.0 148450.0 25 0 7844.4 20629 LLPPRKLWM 9 165 577.3488133402544 1152.6830737473088 2 577.3483764529228 MULTI CID FTMS 0 0 0 8706 210039.03125 1.0 0 0.0 13 Unmodified _LLPPRKLWM_ ENST00000509132.1_1_18:3977886-3978309:-|nuORF 7.910154910731844 0.6385446671287552 5 [NP]{M(Oxidation (M))|F} 3 7 12.491 0.0 0.0 1.0837 0.0 0.0 0.0 791.4950909194368 791.4950909194368 -0.2730652727844411 0.0 -0.2730652727844411 0.0 0 0.0 1.154901959985743 0.0 0.0 [NP]{M(Oxidation (M))|F} 1.0837 - 250 1 1.866 92162.4 0.8700000047683716 4325 4392 8706 SUDHL4_400M_050219_1,8719 SUDHL4_400M_050219_1,8719,LLPPRKLWM False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8720 46.806 800.0 146720.0 25 0 12695.0 29604 QLVQLVLYTS 10 145 582.3351787629199 1162.6558045926397 2 582.3339111208916 MULTI CID FTMS 0 0 0 8706 182297.046875 0.3615965039319669 -3 0.1317405700683593 14 Unmodified _QLVQLVLYTS_ ENSG00000173064|ENST00000682272|HECTD4;ENST00000311694.7_1_12:112687934-112711582:-|nuORF;ENST00000547352.1_1_12:112696298-112699215:-|nuORF;nc|ENSG00000173064|Q9Y4D8-2|HECTD4;nc|ENSG00000173064|Q9Y4D8-3|HECTD4;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8-5|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4 10.823927491677226 0.6659270209832991 5 [K{I|L}]QEE 5 8 19.565 0.0 0.0 1.6828 0.0 0.0 0.0 532.2898587021702 532.2898587021702 8.72740086197676 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 [K{I|L}]QEE 1.6828 - 165 + 1 1.866 89715.1 0.800000011920929 4326 4392 8706 SUDHL4_400M_050219_1,8720 SUDHL4_400M_050219_1,8720,QLVQLVLYTS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8721 46.82 800.0 250190.0 25 0 29153.0 5249 DKFLKEQIK 9 136 574.8358825619457 1147.657212190691 2 574.8360473513603 MULTI CID FTMS 0 0 0 8706 173274.453125 0.5505586577478954 -2 0.091888427734375 15 Unmodified _DKFLKEQIK_ ENSG00000138385|ENST00000260956|SSB;ENST00000461708.1_1_2:170655414-170662397:+|nuORF 7.289230182591677 0.6602208344931196 5 V 1 9 8.6759 0.0 0.0 0.75597 0.0 0.0 1030.5775059302405 0.0 1030.5775059302405 0.0 0.3075901895960733 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.75597 - 33 + 1 1.866 148750.1 0.6299999952316284 4327 4392 8706 SUDHL4_400M_050219_1,8721 SUDHL4_400M_050219_1,8721,DKFLKEQIK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8722 46.834 800.0 159060.0 25 0 10757.0 -1 0 116 629.3831063147518 628.3758298481517 1 630.8604003787041 MULTI CID FTMS 0 0 0 8706 83229.84375 0.233398982470506 -12 0.4359664916992187 16 5 V[HK]{M(Oxidation (M))|F} 4 -1 4.2699 0.0 0.0 0.67951 0.0 0.0 99.1056919782242 0.0 99.1056919782242 0.0 -0.6786440019085616 -0.6786440019085616 0.0 0 0.0 0.0 0.0 0.0 V[HK]{M(Oxidation (M))|F} 0.67951 - 27 1 1.866 96201.3 0.5899999737739563 4328 4392 8706 SUDHL4_400M_050219_1,8722 SUDHL4_400M_050219_1,8722, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8723 46.849 800.0 75112.0 25 0 8410.9 41078 VNFFIFLKILK 11 102 691.4353106449357 1380.8560683566714 2 691.4365722537041 MULTI CID FTMS 0 0 0 8706 133224.921875 0.4099418751851648 -4 0.1429100036621093 17 Unmodified _VNFFIFLKILK_ ENSG00000065325|ENST00000262441|GLP2R 1.3295316138638542 0.8688751186870782 5 Y 1 11 10.181 0.0 0.0 0.7373 0.0 0.0 1199.780535375029 0.0 1199.780535375029 0.0 1.255280103510712 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.7373 - 89 + 1 1.866 48592.4 0.5600000023841858 4329 4392 8706 SUDHL4_400M_050219_1,8723 SUDHL4_400M_050219_1,8723,VNFFIFLKILK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8724 46.863 800.0 165230.0 25 0 20324.0 + 20253 LLDNTDIHL 9 160 527.2822867658499 1052.5500205984995 2 527.2820312380791 MULTI CID FTMS 0 0 0 8706 135940.71875 1.0 0 0.0 18 Unmodified _LLDNTDIHL_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 36.12702656103203 0.0967173616627612 5 {I|L}{I|L}DM[QA]{I|L}H{I|L} 9 3 + 67.285 0.0 0.0 6.3926 6.3926 83.452 0.0 0.0 0.0 29.38802092470481 10.597718523607966 10.597718523607966 1.7609125905568137 0 0.7614393726401688 2.0 0.3807196863200844 0.0 {I|L}{I|L}DM[QA]{I|L}H{I|L};{I|L}{I|L}DN{[ES]|[DT]|[{I|L}C]}{I|L}H{I|L};{I|L}{I|L}DMV{[NV]|[RG]}H{I|L};{I|L}{I|L}DN{I|L}G[YV]{M(Oxidation (M))|F};{I|L}{I|L}DGG{[ES]|[DT]|[{I|L}C]}{I|L}H{I|L};{I|L}{I|L}D[{I|L}A]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H{I|L};{I|L}{I|L}DMV[RH]G{I|L};{I|L}{I|L}DMV[RH]AV;{I|L}{I|L}D[HT]{[RE]|[WV]}G{I|L};{I|L}{I|L}DN{I|L}G[{M(Oxidation (M))|F}V]Y 6.3926;6.2253;5.4425;5.378;5.3504;5.1831;4.4531;4.3779;4.1937;4.1873 -;+;-;-;-;-;-;-;-;- + 790 + 1 1.866 102244.4 0.6200000047683716 4330 4392 8706 SUDHL4_400M_050219_1,8724 SUDHL4_400M_050219_1,8724,LLDNTDIHL True True LLDNTDIHL 46.862595 527.2847 390417.90625 8706.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 3.1668556133906045 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8725 46.876 800.0 85198.0 25 0 7164.9 24117 LYLELTRKW 9 118 407.90646792731786 0 407.9066345095634 PEAK CID FTMS 0 0 0 8706 118034.1953125 1.0 0 0.0 19 Unmodified _LYLELTRKW_ ENSG00000172469|ENST00000358812|MANEA 2.302733041254933 0.3444685223463735 5 Y 1 8 2.4743 0.0 0.0 0.30404 0.0 0.0 551.6283827767077 96.0827883356078 647.7111711123155 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.30404 + + 5 + 1 1.866 60153.4 0.4600000083446502 4331 4392 8706 SUDHL4_400M_050219_1,8725 SUDHL4_400M_050219_1,8725,LYLELTRKW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8726 46.891 800.0 65478.0 25 0 20224.0 14995 ILRRFMLHVKL 11 71 713.4477325927949 0 713.4472534060478 PEAK CID FTMS 0 0 0 8706 108197.21875 1.0 0 0.0 20 Unmodified _ILRRFMLHVKL_ ENST00000475441.5_1_1:28905087-28907099:-|nuORF 1.3295316138638542 0.4761840153648598 5 A 1 11 2.4743 0.0 0.0 0.17365 0.0 0.0 816.5312551252397 534.2941988580686 1350.8254539833083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.17365 - 2 + 1 1.866 47497.8 0.6499999761581421 4332 4392 8706 SUDHL4_400M_050219_1,8726 SUDHL4_400M_050219_1,8726,ILRRFMLHVKL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8728 46.896 10.0 1145500.0 25 0 113130.0 + 27707 PLLEKEAV 8 35 449.7656302605325 897.5167075878651 2 449.7662536501884 MULTI CID FTMS 0 0 0 8727 337251.53125 0.0024444848327236 6 -0.6957664489746094 1 Unmodified _PLLEKEAV_ REV__ENSG00000146247|ENST00000275034|PHIP 2.889219685676258 0.8067950007271085 5 V 1 -1 13.495 0.0 0.0 1.5036 0.0 0.0 780.437169174094 0.0 780.437169174094 0.0 13.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.5036 + + 3 + 1 1.858 15460.2 1.0 4333 4393 8727 SUDHL4_400M_050219_1,8728 SUDHL4_400M_050219_1,8728,PLLEKEAV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8729 46.898 68.0 638450.0 25 0 161550.0 + -1 LLHPSPCV 8 67 461.7448733888451 921.4751938444904 2 461.7449218630791 MULTI CID FTMS 0 0 0 8727 308916.9375 0.050582094052648 6 -0.6957664489746094 2 Carbamidomethyl (C) _LLHPSPC(Carbamidomethyl (C))V_ REV__ENSG00000197591|ENST00000355784|OR11L1 6.354104778181461 0.7857632046190106 5 {I|L}{I|L}D 3 -1 25.942 0.0 0.0 2.8153 0.0 0.0 0.0 577.2566629209152 577.2566629209152 5.012262311882765 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}D 2.8153 - 27 1 1.858 38154.9 1.0 4334 4393 8727 SUDHL4_400M_050219_1,8729 SUDHL4_400M_050219_1,8729,LLHPSPCV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8730 46.899 27.0 2016500.0 25 0 232610.0 + 41011 VMAPRTVLL 9 61 500.3043602527504 998.5941675723008 2 500.3047363162041 MULTI CID FTMS 0 0 0 8727 1809183.375 0.153094266045788 -2 0.264739990234375 3 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 26.268140514670165 0.1969607489560049 5 VMA 3 6 51.198 0.0 0.0 5.127 0.0 0.0 0.0 694.4267662319334 694.4267662319334 9.744237387763093 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + VMA 5.127 + + 79 + 1 1.858 49553.2 1.0 4335 4393 8727 SUDHL4_400M_050219_1,8730 SUDHL4_400M_050219_1,8730,VMAPRTVLL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8731 46.901 82.0 782140.0 25 0 40314.0 -1 0 87 881.4140307134802 1760.8135084937603 2 881.4142333865166 MULTI CID FTMS 0 0 0 8727 583536.3125 0.7977613659394867 -1 0.2013626098632812 4 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YE 13 -1 90.113 0.0 0.0 5.1177 0.0 0.0 0.0 226.1479560858103 226.1479560858103 68.08610077442293 0.0 0.0 0.0 0 0.7302046884880937 1.3979400086720375 0.4247425010840047 1.110924374808178 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YE 5.1177 - 3394 1 1.858 49937.9 1.0 4336 4393 8727 SUDHL4_400M_050219_1,8731 SUDHL4_400M_050219_1,8731, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8732 46.903 127.0 662790.0 25 0 98603.0 + 7826 ELKIKESRE 9 80 566.3225267411881 1130.630500549176 2 566.3221313357353 MULTI CID FTMS 0 0 0 8727 456653.5 0.8026258045118464 -1 0.2013626098632812 5 Unmodified _ELKIKESRE_ REV__ENSG00000154767|ENST00000285021|XPC;REV__ENST00000455144.6_1_3:14206267-14209863:-|nuORF;REV__nc|ENSG00000154767|Q01831-2|XPC 6.723162845929126 0.6799819581413107 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 17 1 1.858 72653.1 1.0 4337 4393 8727 SUDHL4_400M_050219_1,8732 SUDHL4_400M_050219_1,8732,ELKIKESRE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8733 46.906 163.0 304450.0 25 0 57620.0 17502 KPGTSGLRK 9 74 472.2878393395711 942.5611257459424 2 472.2882568240166 MULTI CID FTMS 0 0 0 8727 333501.21875 0.0672032940072915 12 -1.4365119934082031 6 Unmodified _KPGTSGLRK_ ENSG00000079739|ENST00000371084|PGM1;nc|ENSG00000079739|P36871-2|PGM1 1.844237919475145 0.850302753031785 5 {M(Oxidation (M))|F} 1 9 10.969 0.0 0.0 1.1638 0.0 0.0 777.4815797027767 0.0 777.4815797027767 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1638 - 1 + 1 1.858 42169.4 1.0 4338 4393 8727 SUDHL4_400M_050219_1,8733 SUDHL4_400M_050219_1,8733,KPGTSGLRK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8734 46.91 159.0 778320.0 25 0 144390.0 19938 LIDGSTLSM 9 80 468.7392096127669 935.4638662923338 2 468.7393066287041 MULTI CID FTMS 0 0 0 8727 318624.71875 0.0716151339740809 6 -0.6957664489746094 7 Unmodified _LIDGSTLSM_ ENSG00000106608|ENST00000453200|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP 20.453626601364224 0.2830276176381075 5 {I|L}{I|L}DV 4 6 47.384 0.0 0.0 5.0652 0.0 0.0 0.0 492.1772554986938 492.1772554986938 24.195925227640984 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {I|L}{I|L}DV 5.0652 - 78 + 1 1.858 99155.4 1.0 4339 4393 8727 SUDHL4_400M_050219_1,8734 SUDHL4_400M_050219_1,8734,LIDGSTLSM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8735 46.914 211.0 592150.0 25 0 44047.0 + -1 KMMDVTVTI 9 131 518.7696163294266 1035.5246797256532 2 519.2723876833916 MULTI CID FTMS 0 0 0 8727 255638.984375 0.443137780142013 -1 0.2013626098632812 8 Oxidation (M) _LLSGM(Oxidation (M))GATGTL_ ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;nc|ENSG00000185164|Q5JPE7|NOMO2 18.1463463914782 0.6576820063886638 5 [{I|L}T][C(Carbamidomethyl (C))M]VTVT 8 -1 43.409 0.0 0.0 4.192 0.0 0.0 0.0 127.06951550129692 127.06951550129692 25.450397039808763 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.305462187404089 0.0 [{I|L}T][C(Carbamidomethyl (C))M]VTVT 4.192 - 1166 1 1.858 96919.9 1.0 4340 4393 8727 SUDHL4_400M_050219_1,8735 SUDHL4_400M_050219_1,8735,LLSGMGATGTL False False KMMDVTVTI 46.913634 519.272387683392 4311048.0 8727.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 5.132146994272868 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8736 46.917 154.0 275320.0 25 0 70247.0 + 35174 SRSPRRLWLR 10 71 663.8949529760181 1325.775353018836 2 663.8957397341728 MULTI CID FTMS 0 0 0 8727 227967.546875 0.5157666344101659 -1 0.2013626098632812 9 Unmodified _SRSPRRLWLR_ REV__chr17:50379567-50380312|47|13.7|0.84|4.02|+|2|EME1,EME1|1 1.4819007175156935 0.719781833666733 5 K 1 -1 0.48455 0.0 0.0 0.036548 0.0 0.0 911.5300660088736 283.11896692447505 1194.6490329333487 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.036548 - 1 + 1 1.858 42770.3 1.0 4341 4393 8727 SUDHL4_400M_050219_1,8736 SUDHL4_400M_050219_1,8736,SRSPRRLWLR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8737 46.921 216.0 383900.0 25 0 20769.0 + 16945 KILPTLEAV 9 126 492.310392572323 982.606232211446 2 492.3106567263603 MULTI CID FTMS 0 0 0 8727 211098.75 0.1494227133247927 1 -0.0715217590332031 10 Unmodified _KILPTLEAV_ ENSG00000143621|ENST00000361891|ILF2 39.94969957227396 0.0757326808254658 5 [TP]{I|L}[K{I|L}]{I|L}EAV 9 4 + 44.876 0.0 0.0 4.5671 4.5671 84.02 0.0 0.0 0.0 3.797443431192214 27.2584695574052 3.797443431192214 8.29477363621394 0 0.5387254899964358 0.5228787452803376 1.2198565171985376 0.0 [TP]{I|L}[K{I|L}]{I|L}EAV;[{I|L}T]P[K{I|L}]{I|L}EAV;{[QN]|[E{I|L}]|[KN]}PT{I|L}[K{I|L}]AV;[TP]{I|L}E{I|L}[K{I|L}]AV;{[QN]|[E{I|L}]|[KN]}PT{I|L}RRV;[{I|L}T]PE{I|L}[K{I|L}]AV 4.5671;3.7229;3.5898;3.1892;2.4982;2.345 -;-;-;-;-;- 432 1 1.858 65711.7 1.0 4342 4393 8727 SUDHL4_400M_050219_1,8737 SUDHL4_400M_050219_1,8737,KILPTLEAV True True KILPTLEAV 46.920791 492.31065672636 17159378.0 8727.0 ENSG00000143621|ENST00000361891|ILF2 4.2926130294799805 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8738 46.924 150.0 391700.0 25 0 23765.0 23472 LTHDAPATTF 10 102 537.2663297341328 1072.5181065350655 2 537.2674438357353 MULTI CID FTMS 0 0 0 8727 205228.28125 0.5975246505002524 -1 0.2013626098632812 11 Unmodified _LTHDAPATTF_ ENSG00000175727|ENST00000319080|MLXIP;nc|ENSG00000175727|Q9HAP2-2|MLXIP;nc|ENSG00000175727|Q9HAP2-3|MLXIP;nc|ENSG00000175727|Q9HAP2-4|MLXIP;nc|ENSG00000175727|Q9HAP2-5|MLXIP 29.081581746732265 0.3152867722954398 5 [{I|L}T]VD{M(Oxidation (M))|F}[KC]T 8 6 30.437 0.0 0.0 2.8379 0.0 0.0 0.0 162.05649744205314 162.05649744205314 0.0823341208833738 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3252574989159953 0.0 [{I|L}T]VD{M(Oxidation (M))|F}[KC]T 2.8379 - 500 + 1 1.858 53112.1 1.0 4343 4393 8727 SUDHL4_400M_050219_1,8738 SUDHL4_400M_050219_1,8738,LTHDAPATTF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8739 46.926 131.0 270380.0 25 0 28164.0 25772 NIVLPTQSIVP 11 58 590.8487248521519 1179.6828967711035 2 590.8489868044853 MULTI CID FTMS 0 0 0 8727 199632.6875 0.3588018143394554 -1 0.2013626098632812 12 Unmodified _NIVLPTQSIVP_ ENSG00000084092|ENST00000264230|NOA1 1.1933415558491238 0.8695176722560516 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.858 32062.9 1.0 4344 4393 8727 SUDHL4_400M_050219_1,8739 SUDHL4_400M_050219_1,8739,NIVLPTQSIVP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8740 46.931 240.0 279890.0 25 0 53573.0 -1 LLVLRSML 8 90 480.8010031072836 959.5874532813672 2 480.8011657595634 MULTI CID FTMS 0 0 0 8727 161155.125 0.0361137759533599 9 -1.1174430847167969 13 Oxidation (M) _LLVLRSM(Oxidation (M))L_ ENST00000421138.6_1_12:21636474-21639429:-|nuORF 2.889219685676258 0.8067950007271085 5 {I|L} 1 -1 11.594 0.0 0.0 1.2082 0.0 0.0 828.4925416376157 0.0 828.4925416376157 0.0 9.3753063169585 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2082 + + 9 + 1 1.858 57728.6 1.0 4345 4393 8727 SUDHL4_400M_050219_1,8740 SUDHL4_400M_050219_1,8740,LLVLRSML False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8741 46.94 533.0 192740.0 25 0 16836.0 -1 YLATMAMDGM 10 141 560.2297665587087 1118.4449801842172 2 560.2299682497978 MULTI CID FTMS 0 0 0 8727 111097.1953125 0.2341386211763813 1 -0.0715217590332031 14 Oxidation (M) _YLATM(Oxidation (M))AMDGM_ ENSG00000136485|ENST00000614556|DCAF7 6.723162845929126 0.6955379296933136 5 [Y{I|L}][PA]A{I|L}QTE 9 -1 40.353 0.0 0.0 3.608 0.0 0.0 0.0 128.93750883095473 128.93750883095473 27.879099962974152 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.4247425010840047 0.0 [Y{I|L}][PA]A{I|L}QTE 3.608 - 631 1 1.858 79639.7 1.0 4346 4393 8727 SUDHL4_400M_050219_1,8741 SUDHL4_400M_050219_1,8741,YLATMAMDGM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8742 46.945 270.0 289500.0 25 0 58673.0 + 37250 TIMPKDIQL 9 101 529.7989044186373 1057.5832559040746 2 529.7998535037041 MULTI CID FTMS 0 0 0 8727 109605.2421875 0.0386230560115003 -2 0.264739990234375 15 Unmodified _TIMPKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 43.77239144664712 0.0547478964384323 5 [{I|L}T][YV]QPPQ{I|L} 9 5 + 61.978 0.0 0.0 5.8603 5.8603 89.555 0.0 0.0 0.0 26.44016261540407 14.973024840566469 14.973024840566469 9.208187539523747 0 0.805462187404089 2.0 0.0 1.1861818737241734 [{I|L}T][YV]QPPQ{I|L};[{I|L}T][YV][AG]PPQ{I|L};[{I|L}T][YV]QPP[AG]{I|L};[{I|L}T]AAPMT{I|L}[Q{I|L}];[{I|L}T][WR]RMPV;[{I|L}T]MR[WR]PV;[{I|L}T][YV]QPPAAV;{[QN]|[E{I|L}]|[KN]}[WK]RMPV;[{I|L}T]AAPQ[YV]PV;[{I|L}T][KQ]{[QN]|[E{I|L}]|[KN]}MPV 5.8603;4.9897;4.6297;4.1514;3.6966;3.532;3.4662;3.4523;3.4385;3.3685 -;-;-;-;-;-;-;-;-;- 440 + 1 1.858 65816.9 1.0 4347 4393 8727 SUDHL4_400M_050219_1,8742 SUDHL4_400M_050219_1,8742,TIMPKDIQL True True TIMPKDIQL 46.945324 529.799853503704 31071272.0 8727.0 ENSG00000278828|ENST00000685041|H3C10;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000197409|ENST00000356476|H3C4;;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000188375|ENST00000340398|H3-5;;ENSG00000277775|ENST00000618052|H3C7;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;;ENSG00000275379|ENST00000616365|H3C11;;ENSG00000163041|ENST00000366815|H3-3A 5.123077710469564 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8743 46.959 800.0 228510.0 25 0 32097.0 30954 RKRVRRDVVH 10 85 660.908366588045 1319.80218024289 2 660.9081298708916 MULTI CID FTMS 0 0 0 8727 102023.671875 0.1912087740246925 2 -0.2193870544433593 16 Unmodified _RKRVRRDVVH_ ENSG00000145331|ENST00000394876|TRMT10A;ENST00000507394.1_1_4:100479199-100480495:-|nuORF 3.2813086475875832 0.7114585191678878 5 {I|L} 1 10 10.713 0.0 0.0 0.81174 0.0 0.0 1188.7072685991384 0.0 1188.7072685991384 0.0 5.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.81174 - 41 + 1 1.858 137801.7 0.6100000143051147 4348 4393 8727 SUDHL4_400M_050219_1,8743 SUDHL4_400M_050219_1,8743,RKRVRRDVVH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8744 46.963 189.0 246270.0 25 0 39268.0 + -1 ALLVVLICAFF 11 76 633.3690143829892 1264.7234758327784 2 633.3684570193291 MULTI CID FTMS 0 0 0 8727 250561.296875 0.1333330212569576 -5 0.3442726135253906 17 Carbamidomethyl (C) _ALLVVLIC(Carbamidomethyl (C))AFF_ REV__ENSG00000198018|ENST00000370489|ENTPD7 3.5964929083625545 0.858179447565866 5 [{I|L}A]{I|L}V 4 -1 13.188 0.0 0.0 1.0427 0.0 0.0 0.0 865.4242259150627 865.4242259150627 2.5916555876480807 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [{I|L}A]{I|L}V 1.0427 + + 17 1 1.858 42954.3 1.0 4349 4393 8727 SUDHL4_400M_050219_1,8744 SUDHL4_400M_050219_1,8744,ALLVVLICAFF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8746 46.968 64.0 574890.0 25 0 126520.0 -1 HILACARLSIR 11 61 655.3823275608848 1308.7501021885696 2 655.3822509646416 MULTI CID FTMS 0 0 0 8745 719336.5 1.0 0 0.0 1 Carbamidomethyl (C) _HILAC(Carbamidomethyl (C))ARLSIR_ ENSG00000107960|ENST00000224950|STN1;ENST00000466828.5_1_10:105642444-105658073:-|nuORF 1.1933415558491238 0.8695176722560516 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.858 45342.3 1.0 4350 4394 8745 SUDHL4_400M_050219_1,8746 SUDHL4_400M_050219_1,8746,HILACARLSIR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8747 46.969 77.0 640950.0 25 0 141870.0 30234 QWRRRPALR 9 55 619.8690591047385 1237.723565276277 2 619.8695556521416 MULTI CID FTMS 0 0 0 8745 735292.6875 0.3317221980547388 2 -0.2428627014160156 2 Unmodified _QWRRRPALR_ ENST00000240139.9_1_8:22298692-22298875:+|nuORF 0.6014990680409731 0.8936861360942873 5 K 1 9 1.5938 0.0 0.0 0.12877 0.0 0.0 823.4764777292052 283.11884485416255 1106.5953225833678 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.12877 - 5 + 1 1.858 44105.1 1.0 4351 4394 8745 SUDHL4_400M_050219_1,8747 SUDHL4_400M_050219_1,8747,QWRRRPALR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8748 46.971 46.0 1232900.0 25 0 231370.0 + -1 PGKVVCHRLR 10 68 611.3559208962663 1220.6972888593325 2 611.3563720583916 MULTI CID FTMS 0 0 0 8745 1052484.0 0.2881761512743808 7 -0.8987503051757812 3 Carbamidomethyl (C) _PGKVVC(Carbamidomethyl (C))HRLR_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 1.4819007175156935 0.719781833666733 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.858 51374.2 1.0 4352 4394 8745 SUDHL4_400M_050219_1,8748 SUDHL4_400M_050219_1,8748,PGKVVCHRLR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8749 46.974 151.0 557240.0 25 0 69570.0 40902 VLSAAKRQRLN 11 86 628.3826603915255 1254.750767849851 2 628.3836547732353 MULTI CID FTMS 0 0 0 8745 374209.375 0.1619978198808597 2 -0.2428627014160156 4 Unmodified _VLSAAKRQRLN_ ENSG00000176595|ENST00000320248|KBTBD11 5.731851221503515 0.8481046878870278 5 Y 1 11 11.259 0.0 0.0 0.89731 0.0 0.0 1073.6764097949665 0.0 1073.6764097949665 0.0 1.751461659183839 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.89731 - 27 + 1 1.858 69146.8 1.0 4353 4394 8745 SUDHL4_400M_050219_1,8749 SUDHL4_400M_050219_1,8749,VLSAAKRQRLN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8750 46.987 756.0 161720.0 25 0 18442.0 + 15894 ISSFVIDLVSK 11 137 604.3482024849948 1206.6818520367897 2 604.3488036990166 MULTI CID FTMS 0 0 0 8745 320178.25 0.1718832601469078 7 -0.8987503051757812 5 Unmodified _ISSFVIDLVSK_ REV__ENSG00000166884|ENST00000300127|OR4D6 2.9952420565917617 0.861016188266951 5 R 1 -1 3.4949 0.0 0.0 0.28962 0.0 0.0 464.28115677198974 583.2867525690061 1047.5679093409958 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.28962 - 27 + 1 1.858 90872.9 1.0 4354 4394 8745 SUDHL4_400M_050219_1,8750 SUDHL4_400M_050219_1,8750,ISSFVIDLVSK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8751 46.99 181.0 442640.0 25 0 69018.0 + 24541 MLANDIARL 9 88 508.7813280715377 1015.5481032098754 2 508.7816345095634 MULTI CID FTMS 0 0 0 8745 305231.1875 1.0 0 0.0 6 Unmodified _MLAIYLVHG_ ENST00000484846.1_1_11:64621807-64623066:-|nuORF;ENSG00000110047|ENST00000320631|EHD1 28.17323086031832 0.1727213568982648 5 M{I|L}AND{I|L}AR{I|L} 9 5 + 82.389 0.0 0.0 8.1127 8.1127 94.307 0.0 0.0 0.0 67.52365647188633 7.351905544230348 7.351905544230348 9.208187539523747 0 0.805462187404089 2.0 0.0 0.0 M{I|L}AND{I|L}AR{I|L};M{I|L}AGGD{I|L}AR{I|L};M{I|L}A{I|L}[DN]AR{I|L};M{I|L}{I|L}A[DN]AR{I|L};M{I|L}A[QT][PS]R{I|L};M{I|L}A[QT][RP]TV;M{I|L}A[QT][RP]S{I|L};[KP]{[CT]|[{M(Oxidation (M))|F}G]}D{I|L}AR{I|L} 8.1127;7.206;6.2664;6.0133;4.42;4.3303;4.2073;1.9539 -;-;-;-;-;-;-;- 172 + 1 1.858 63582.2 1.0 4355 4394 8745 SUDHL4_400M_050219_1,8751 SUDHL4_400M_050219_1,8751,MLAIYLVHG False False MLANDIARL 46.990161 508.781634509563 2115729.25 8745.0 ENST00000484846.1_1_11:64621807-64623066:-|nuORF;;ENSG00000110047|ENST00000320631|EHD1 5.292385737101237 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8752 46.995 260.0 294480.0 25 0 45216.0 + 7694 EKSRSRKRE 9 94 588.3348062467425 1174.6550595602848 2 588.3353759646416 MULTI CID FTMS 0 0 0 8745 269283.03125 0.2052697202938065 8 -1.0459213256835938 7 Unmodified _EKSRSRKRE_ REV__ENSG00000131051|ENST00000253363|RBM39;REV__ENST00000429968.5_1_20:34292405-34322136:-|nuORF;REV__ENST00000442447.5_1_20:34319864-34322136:-|nuORF;REV__ENST00000492779.5_1_20:34292405-34320086:-|nuORF;REV__nc|ENSG00000131051|Q14498-2|RBM39;REV__nc|ENSG00000131051|Q14498-3|RBM39 1.844237919475145 0.850302753031785 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.858 63121.6 1.0 4356 4394 8745 SUDHL4_400M_050219_1,8752 SUDHL4_400M_050219_1,8752,EKSRSRKRE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8753 47.003 431.0 316840.0 25 0 64873.0 + 16098 ITSDYQLRV 9 107 547.7971775136498 1093.5798020940997 2 547.7960082888603 MULTI CID FTMS 0 0 0 8745 175153.9375 0.5850997297649121 -1 0.0715217590332031 8 Unmodified _ITSDYQLRV_ REV__nc|ENSG00000170703|Q8N841-4|TTLL6 29.081581746732265 0.1611639662936252 5 [{I|L}T]SDYN{I|L}R{I|L} 9 -1 + 76.634 0.0 0.0 7.0077 7.0077 92.494 0.0 0.0 0.0 45.87205316164642 9.665762445130497 9.665762445130497 9.208187539523747 0 0.8494850021680094 2.0 0.3252574989159953 0.3494850021680094 [{I|L}T]SDYN{I|L}R{I|L};[{I|L}T]SDYGG{I|L}R{I|L};[{I|L}T]SD{I|L}[YN]R{I|L};[{I|L}T]S{[WS]|[C(Carbamidomethyl (C)){I|L}]}[MT]R{I|L};[{I|L}T]SD{I|L}[PG][KT]Y;[{I|L}T]{I|L}[C(Carbamidomethyl (C))S][MT]R{I|L};[{I|L}T][{M(Oxidation (M))|F}V]N[MT]R{I|L};[{I|L}T]S[{M(Oxidation (M))|F}V]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R{I|L};VVCDYN{I|L}R{I|L};[{I|L}T][{M(Oxidation (M))|F}V]S{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R{I|L} 7.0077;6.1656;5.132;4.4043;4.0987;4.0887;4.0887;3.968;3.8981;3.6524 -;-;-;-;-;-;-;-;-;- 652 + 1 1.858 106149.1 1.0 4357 4394 8745 SUDHL4_400M_050219_1,8753 SUDHL4_400M_050219_1,8753,ITSDYQLRV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8754 47.009 347.0 175850.0 25 0 22130.0 -1 LLDSIEDM 8 87 476.2226069478161 950.4306609624324 2 476.2218200564384 MULTI CID FTMS 0 0 0 8745 156116.59375 0.0697073867911175 7 -0.8987503051757812 9 Oxidation (M) _LLDSIEDM(Oxidation (M))_ ENSG00000241127|ENST00000223273|YAE1 9.347437153973935 0.7675937258251505 5 {I|L}{I|L}D 3 -1 27.447 0.0 0.0 2.8879 0.0 0.0 0.0 606.211580722451 606.211580722451 20.457574905606748 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}D 2.8879 + + 23 1 1.858 49591.1 1.0 4358 4394 8745 SUDHL4_400M_050219_1,8754 SUDHL4_400M_050219_1,8754,LLDSIEDM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8755 47.014 283.0 351190.0 25 0 71302.0 + 9165 FGFLKHSES 9 87 526.2635172331051 1050.51248153301 2 526.2641479372978 MULTI CID FTMS 0 0 0 8745 150800.875 0.7952658751079237 -1 0.0715217590332031 10 Unmodified _FGFLKHSES_ REV__nc|ENSG00000145414|Q96HR8-2|NAF1 36.12702656103203 0.0967173616627612 5 EP{M(Oxidation (M))|F}GE 5 -1 52.206 0.0 0.0 4.9696 0.0 0.0 473.2607246476037 0.0 473.2607246476037 0.0 39.73197507588033 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 EP{M(Oxidation (M))|F}GE 4.9696 - 119 1 1.858 80624.1 1.0 4359 4394 8745 SUDHL4_400M_050219_1,8755 SUDHL4_400M_050219_1,8755,FGFLKHSES False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8756 47.028 800.0 186300.0 25 0 39013.0 + 35793 SVIRPLHRQ 9 140 553.3324349710358 1104.6503170088715 2 553.3331786990166 MULTI CID FTMS 0 0 0 8745 141492.625 0.8165678861989859 -1 0.0715217590332031 11 Unmodified _SVIRPLHRQ_ REV__ENSG00000184860|ENST00000328945|SDR42E1 3.944395688203298 0.7769873103969335 5 [RK]VDA 5 -1 19.208 0.0 0.0 1.7388 0.0 0.0 0.0 532.2747896783811 532.2747896783811 9.119543704721591 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [RK]VDA 1.7388 - 91 + 1 1.858 114201.8 0.6399999856948853 4360 4394 8745 SUDHL4_400M_050219_1,8756 SUDHL4_400M_050219_1,8756,SVIRPLHRQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8757 47.037 448.0 263140.0 25 0 31577.0 + 43701 YAYDGKDYLAL 11 123 646.3139178799418 1290.6132828266834 2 646.3145629763603 MULTI CID FTMS 0 0 0 8745 127910.515625 0.9894230983066514 -1 0.0715217590332031 12 Unmodified _YAYDGKDYLAL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 77.04852534044906 0.0119778990295177 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}A{I|L} 11 5 + 89.441 0.0 0.0 6.9301 6.9301 84.979 0.0 0.0 0.0 15.0 15.070623213458036 15.0 1.7731749024396066 0 1.805462187404089 2.0 1.4940840204505517 0.3494850021680094 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[QT]YAY{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DY{I|L}AYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}YA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[QT]Y{I|L}AYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[QT]YA{I|L}YA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DY[QT]AY{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YD[QT]AY{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DY[QT]{I|L}AYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YD[QT]{I|L}AYA{I|L} 6.9301;6.7927;6.7081;6.6781;6.5707;6.5407;6.5324;6.519;6.3104;6.297 -;-;-;-;-;-;-;-;-;- 11497 1 1.858 92199.7 1.0 4361 4394 8745 SUDHL4_400M_050219_1,8757 SUDHL4_400M_050219_1,8757,YAYDGKDYLAL True True YAYDGKDYLAL 47.037136 646.31456297636 1213657.5 8745.0 nc|ENSG00000204632|P17693-4|HLA-G;;nc|ENSG00000204632|P17693-5|HLA-G;;ENSG00000204632|ENST00000360323|HLA-G 2.804098387559255 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8758 47.047 541.0 255670.0 25 0 21567.0 + 31254 RLVDLSGGWDA 11 121 594.8038092540224 1187.5930655748448 2 594.8034545779228 MULTI CID FTMS 0 0 0 8745 130433.40625 0.7985249209198285 -1 0.0715217590332031 13 Unmodified _RLVDLSGGWDA_ ENST00000262518.8_1_16:30710550-30715400:+|nuORF;ENST00000411466.6_3_16:30709553-30715400:+|nuORF 49.74193281347159 0.1190592179673825 5 [R{I|L}]VD{I|L}SGGGEDA 12 2 + 80.545 0.0 0.0 6.7822 6.7822 88.772 0.0 0.0 0.0 2.9318250140072166 51.41563799163855 2.9318250140072166 6.00833760139686 0 0.4247425010840047 0.0 1.0994850021680094 0.0 [R{I|L}]VD{I|L}SGGGEDA;[R{I|L}]VD{I|L}SGGGDEA;[R{I|L}]VD{I|L}SGGWDA;[R{I|L}]VD{I|L}SNGEDA;[R{I|L}]VD{I|L}SGNEDA;[R{I|L}]VD{I|L}GSGGEDA;[R{I|L}]VD{I|L}SNGDEA;[R{I|L}]VD{I|L}SGNDEA;[R{I|L}]VD{I|L}GSGGDEA;[R{I|L}]VD{I|L}SNWDA 6.7822;6.2763;6.2255;5.9516;5.9312;5.9176;5.4457;5.4253;5.4117;5.3979 -;-;+;-;-;-;-;-;-;- + 889 1 1.858 103762.0 1.0 4362 4394 8745 SUDHL4_400M_050219_1,8758 SUDHL4_400M_050219_1,8758,RLVDLSGGWDA True True RLVDLSGGWDA 47.046652 594.803454577923 1324282.125 8745.0 ENST00000262518.8_1_16:30710550-30715400:+|nuORF;;ENST00000411466.6_3_16:30709553-30715400:+|nuORF 7.799670378367106 2.0 True 11.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8759 47.06 800.0 153570.0 25 0 37858.0 -1 KLRKKFMILS 10 104 640.4005670721874 1278.7865812111747 2 640.4010497927666 MULTI CID FTMS 0 0 0 8745 105321.03125 0.8347104424034222 2 -0.2428627014160156 14 Oxidation (M) _KLRKKFM(Oxidation (M))ILS_ ENST00000338230.3_2_19:53270830-53270923:-|nuORF 1.6526216038709556 0.7189921496796233 5 {I|L} 1 -1 11.109 0.0 0.0 0.86873 0.0 0.0 1147.6914864619544 0.0 1147.6914864619544 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.86873 + + 50 + 1 1.858 98992.7 0.5400000214576721 4363 4394 8745 SUDHL4_400M_050219_1,8759 SUDHL4_400M_050219_1,8759,KLRKKFMILS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8760 47.074 800.0 152150.0 25 0 25549.0 14880 ILLAHEKLSV 10 130 561.8456954847103 1121.6768380362205 2 561.8463622927666 MULTI CID FTMS 0 0 0 8745 87992.0703125 0.9423292556182996 -1 0.0715217590332031 15 Unmodified _ILLAHEKLSV_ ENSG00000169718|ENST00000306796|DUS1L;ENST00000578264.1_1_17:80019305-80022125:-|nuORF 3.944395688203298 0.708391353636983 5 {I|L} 1 9 10.596 0.0 0.0 0.94465 0.0 0.0 990.5815449227424 0.0 990.5815449227424 0.0 1.2636265804471325 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.94465 + + 123 + 1 1.858 93616.8 0.4699999988079071 4364 4394 8745 SUDHL4_400M_050219_1,8760 SUDHL4_400M_050219_1,8760,ILLAHEKLSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8761 47.083 422.0 288130.0 25 0 36011.0 + + 8983 KLGFTVTV 8 124 432.7633190052833 863.5120850773666 2 432.7633239626884 MULTI CID FTMS 0 0 0 8745 105062.2265625 0.6001459579475454 -1 0.0715217590332031 16 Unmodified _FASKLVIS_ nc|ENSG00000134900|P29144|TPP2;ENSG00000134900|ENST00000376052|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 28.486842064014134 0.4448922141344407 5 TVTV 4 -1 26.102 0.0 0.0 3.0228 0.0 0.0 445.2702503888688 0.0 445.2702503888688 0.0 6.136671203378867 0.0 0.0 0 0.6677353201839438 0.0 0.9247425010840048 0.0 TVTV 3.0228 - 190 1 1.858 98993.1 1.0 4365 4394 8745 SUDHL4_400M_050219_1,8761 SUDHL4_400M_050219_1,8761,FASKLVIS False False KLGFTVTV 47.083008 432.763323962688 1040487.75 8745.0 nc|ENSG00000134900|P29144|TPP2;;ENSG00000134900|ENST00000376052|TPP2;;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 3.2294551531473794 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8762 47.097 800.0 113100.0 25 0 9708.4 13403 HLLIDIWVTSI 11 118 437.2571970773097 1308.749761832129 3 437.2579833865166 MULTI CID FTMS 0 0 0 8745 109024.2265625 1.0 0 0.0 17 Unmodified _HLLIDIWVTSI_ L1MB2_dup4144|chr8:118373987-118374958:-|2.471455437334812|0.0262280702101092|6.56|47.0|58|2|anti-sense 5.296884461304476 0.8501568894076437 5 {I|L} 1 10 12.474 0.0 0.0 0.95314 0.0 0.0 1177.6546518241196 0.0 1177.6546518241196 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.95314 + + 20 + 1 1.858 80672.2 0.4099999964237213 4366 4394 8745 SUDHL4_400M_050219_1,8762 SUDHL4_400M_050219_1,8762,HLLIDIWVTSI False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 8763 47.111 800.0 106310.0 25 0 7447.7 + -1 VTMKKVKK 8 143 489.3140956704832 976.6136384077664 2 489.3148071169853 MULTI CID FTMS 0 0 0 8745 96380.1015625 0.0343046635900586 7 -0.8987503051757812 18 Oxidation (M) _VTM(Oxidation (M))KKVKK_ REV__ENSG00000198626|ENST00000366574|RYR2;REV__nc|ENSG00000198626|Q92736-2|RYR2 0.7936320650641473 0.8195151834710337 5 {I|L} 1 -1 10.837 0.0 0.0 1.1097 0.0 0.0 845.5187267640148 0.0 845.5187267640148 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1097 - 41 + 1 1.858 68329.1 0.4199999868869781 4367 4394 8745 SUDHL4_400M_050219_1,8763 SUDHL4_400M_050219_1,8763,VTMKKVKK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8765 47.118 186.0 181680.0 25 0 16102.0 + 43152 VYPTIQKTIT 10 70 582.3351787629199 1162.6558045926397 2 582.3351928591728 MULTI CID FTMS 0 0 0 8764 504144.9375 1.0 0 0.0 1 Unmodified _VYPTIQKTIT_ REV__ENSG00000158286|ENST00000377939|RNF207 1.6526216038709556 0.7189921496796233 5 PP 2 -1 3.1876 0.0 0.0 0.27416 0.0 0.0 508.30856998111113 457.2083834283813 965.5169534094924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.27416 - 26 + 1 1.848 33836.4 1.0 4368 4395 8764 SUDHL4_400M_050219_1,8765 SUDHL4_400M_050219_1,8765,VYPTIQKTIT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8766 47.122 228.0 337180.0 25 0 31522.0 + 25136 MQGLRLKALPA 11 82 599.3617691859602 1196.7089854387202 2 599.3620483279228 MULTI CID FTMS 0 0 0 8764 228103.109375 0.5542957448555089 1 -0.0949974060058593 2 Unmodified _MQGLRLKALPA_ REV__ENSG00000168477|ENST00000644971|TNXB;REV__nc|ENSG00000168477|P22105-1|TNXB;REV__nc|ENSG00000168477|P22105-4|TNXB 6.2057823575117 0.8458686499021061 5 V 1 -1 3.0989 0.0 0.0 0.25896 0.0 0.0 498.3330463016912 596.2967012994749 1094.6297476011662 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.25896 - 53 + 1 1.848 63754.4 1.0 4369 4395 8764 SUDHL4_400M_050219_1,8766 SUDHL4_400M_050219_1,8766,MQGLRLKALPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8767 47.124 83.0 925200.0 25 0 167330.0 + 31089 RLLEATSYL 9 77 533.300066251821 1064.585579570442 2 533.3007079958916 MULTI CID FTMS 0 0 0 8764 766843.625 0.6876187690055628 -1 0.1478652954101562 3 Unmodified _RLLEATSYL_ ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A 31.26834338654808 0.1333407332142048 5 EATSY{I|L} 6 3 53.805 0.0 0.0 5.0541 0.0 0.0 382.2699757306656 0.0 382.2699757306656 0.0 39.54033167468005 0.0 0.0 0 0.8807196863200843 0.0 0.9247425010840048 0.0 + EATSY{I|L} 5.0541 + + 73 1 1.848 61575.6 1.0 4370 4395 8764 SUDHL4_400M_050219_1,8767 SUDHL4_400M_050219_1,8767,RLLEATSYL False True RLLEATSYL 47.124218 533.300707995892 7654175.5 8764.0 ENSG00000004487|ENST00000400181|KDM1A;;nc|ENSG00000004487|O60341|KDM1A 6.37930981318156 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8768 47.127 116.0 657660.0 25 0 75052.0 + -1 VMAPRTLLL 9 95 515.3096922427451 1028.60483155229 2 515.3096801638603 MULTI CID FTMS 0 0 0 8764 319780.3125 0.5131760712111743 -1 0.1478652954101562 4 Oxidation (M) _VM(Oxidation (M))APRTLLL_ ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 29.84058131909904 0.1515068451768857 5 AD{I|L} 3 -1 39.45 0.0 0.0 3.8353 0.0 0.0 711.4658807798376 0.0 711.4658807798376 0.0 22.460762528683706 0.0 0.0 0 1.325257498915995 0.0 0.0 0.0 AD{I|L} 3.8353 - 177 1 1.848 62765.1 1.0 4371 4395 8764 SUDHL4_400M_050219_1,8768 SUDHL4_400M_050219_1,8768,VMAPRTLLL False False VMAPRTLLL 47.12665 515.30968016386 10216259.0 8764.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 5.047289689381917 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8769 47.14 800.0 90246.0 25 0 23954.0 25234 MVKPRLYRKY 10 94 677.3952702999136 1352.775987666627 2 677.8970825076103 MULTI CID FTMS 0 0 0 8764 148947.59375 0.3589169725273927 -5 0.5126380920410156 5 Unmodified _MVKPRLYRKY_ AluSc_dup26247|chr14:55143427-55143722:-|1.173422654597276|0.0255733500930304|5.52|48.0|1|1|sense 1.844237919475145 0.7181058121064529 5 {I|L} 1 9 10.596 0.0 0.0 0.78327 0.0 0.0 1221.6808471410395 0.0 1221.6808471410395 0.0 0.6744069812286373 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.78327 + + 29 + 1 1.848 67882.0 0.6899999976158142 4372 4395 8764 SUDHL4_400M_050219_1,8769 SUDHL4_400M_050219_1,8769,MVKPRLYRKY False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 8770 47.154 800.0 152300.0 25 0 15618.0 + 24008 VIWDPDSVKTISA 13 120 715.88091428168 1429.74727563016 2 715.8812744021416 MULTI CID FTMS 0 0 0 8764 109337.515625 0.9855836440688052 -1 0.1478652954101562 6 Unmodified _LVWYYCTLTIR_ ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2 32.78568957990786 0.3235288296534633 5 [{I|L}V]W{[CT]|[{M(Oxidation (M))|F}G]}S{I|L}TKVS 11 6 77.849 0.0 0.0 5.4449 0.0 0.0 0.0 209.0572298639281 209.0572298639281 29.636817427937626 0.0 0.0 0.0 0 0.6861818737241735 2.0 1.8001648626366045 0.0 [{I|L}V]W{[CT]|[{M(Oxidation (M))|F}G]}S{I|L}TKVS 5.4449 - 7508 + 1 1.848 94318.3 0.6100000143051147 4373 4395 8764 SUDHL4_400M_050219_1,8770 SUDHL4_400M_050219_1,8770,LVWYYCTLTIR False False VIWDPDSVKTISA 47.154318 715.881274402142 544171.375 8764.0 ENSG00000092964|ENST00000521913|DPYSL2;;nc|ENSG00000092964|Q16555-2|DPYSL2;;nc|ENSG00000092964|Q16555|DPYSL2 7.58297332127889 2.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8771 47.168 800.0 279390.0 25 0 29699.0 + 14974 ILQDEQYLM 9 162 576.7843485077481 0 576.7836181521416 PEAK CID FTMS 0 0 0 8764 108295.359375 0.3231339047225112 -1 0.1478652954101562 7 Unmodified _ILQDEQYLM_ ENSG00000119599|ENST00000358377|DCAF4;nc|ENSG00000119599|Q8WV16-2|DCAF4;nc|ENSG00000119599|Q8WV16-3|DCAF4;nc|ENSG00000119599|Q8WV16-4|DCAF4;nc|ENSG00000119599|Q8WV16-5|DCAF4 68.08070601005525 0.0150358085444205 5 YQ{I|L}{I|L}E 5 7 50.222 0.0 0.0 4.3612 0.0 0.0 262.1346079229712 240.06316553287343 502.19777345584464 0.0 0.0 0.0 0.0 0 0.5 0.0 1.4476212463643423 0.7302046884880937 YQ{I|L}{I|L}E 4.3612 - 805 + 1 1.848 167314.9 0.5699999928474426 4374 4395 8764 SUDHL4_400M_050219_1,8771 SUDHL4_400M_050219_1,8771,ILQDEQYLM True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8772 47.182 800.0 129080.0 25 0 12925.0 -1 YILDDSHCV 9 150 561.252179505766 0 561.2515746951103 PEAK CID FTMS 0 0 0 8764 104326.5546875 1.0 0 0.0 8 Carbamidomethyl (C) _YILDDSHC(Carbamidomethyl (C))V_ ENSG00000164061|ENST00000296452|BSN 8.593279151180031 0.3284076903191179 5 Y 1 -1 4.6041 0.0 0.0 0.4109 0.0 0.0 872.3366668955179 82.06702600650624 954.403692902024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.4109 + + 50 + 1 1.848 81982.5 0.5600000023841858 4375 4395 8764 SUDHL4_400M_050219_1,8772 SUDHL4_400M_050219_1,8772,YILDDSHCV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8773 47.188 342.0 166240.0 25 0 14960.0 16746 KFIRPEGEI 9 103 544.8112154917605 0 544.8112060427666 PEAK CID FTMS 0 0 0 8764 96564.1875 0.5357820282601875 7 -0.8980560302734375 9 Unmodified _KFIRPEGEI_ ENSG00000172183|ENST00000306072|ISG20;nc|ENSG00000172183|Q96AZ6-2|ISG20 17.44264345198275 0.2268971914127055 5 NK 2 9 10.846 0.0 0.0 0.99724 0.0 0.0 131.093670141921 711.3674410455686 842.4611111874897 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 NK 0.99724 - 52 + 1 1.848 46559.1 1.0 4376 4395 8764 SUDHL4_400M_050219_1,8773 SUDHL4_400M_050219_1,8773,KFIRPEGEI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8774 47.192 107.0 436750.0 25 0 51900.0 -1 VGKEAVLLLMH 11 62 626.3617292476916 0 626.3611328005791 PEAK CID FTMS 0 0 0 8764 165975.5625 0.2120478477847199 -2 0.2193870544433593 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VGKEAVLLLMH_ ENST00000438092.6_1_6:146284873-146285071:-|nuORF 2.735195868890462 0.4761840153648598 5 M 1 -1 4.6041 0.0 0.0 0.36812 0.0 0.0 660.368464743627 456.2764071100219 1116.644871853649 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.36812 + + 1 + 1 1.848 39319.7 1.0 4377 4395 8764 SUDHL4_400M_050219_1,8774 SUDHL4_400M_050219_1,8774,VGKEAVLLLMH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8775 47.206 800.0 197020.0 25 0 21309.0 + 34101 SLLLFLAESR 10 138 574.8358825619457 1147.657212190691 2 574.8361083865166 MULTI CID FTMS 0 0 0 8764 129826.4296875 0.4125078081613568 1 -0.0949974060058593 11 Unmodified _SLLLFLAESR_ REV__ENSG00000087263|ENST00000566157|OGFOD1;REV__nc|ENSG00000087263|Q8N543-2|OGFOD1 8.745405648335112 0.6861838735306406 5 Y 1 -1 11.42 0.0 0.0 0.99507 0.0 0.0 966.582350595768 0.0 966.582350595768 0.0 2.022852937855255 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.99507 - 32 + 1 1.848 121014.4 0.5899999737739563 4378 4395 8764 SUDHL4_400M_050219_1,8775 SUDHL4_400M_050219_1,8775,SLLLFLAESR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8777 47.21 4.4 10370000.0 25 0 1396400.0 + 41012 VMAPRTVLL 9 59 500.3043602527504 998.5941675723008 2 500.3051025271416 MULTI CID FTMS 0 0 0 8776 10781683.0 0.9123529811472816 1 -0.1083526611328125 1 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 22.736283301280096 0.2418982879461534 5 VMA 3 6 51.198 0.0 0.0 5.127 0.0 0.0 0.0 694.4256675718385 694.4256675718385 11.517412290202673 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + VMA 5.127 + + 41 + 1 1.848 40350.3 1.0 4379 4396 8776 SUDHL4_400M_050219_1,8777 SUDHL4_400M_050219_1,8777,VMAPRTVLL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8778 47.212 25.0 1686100.0 25 0 383130.0 16012 ITELQKNGR 9 61 529.7989044186373 1057.5832559040746 2 529.7996703982353 MULTI CID FTMS 0 0 0 8776 1552685.5 0.5471404272083596 1 -0.1083526611328125 2 Unmodified _ITELQKNGR_ ENST00000441868.2_1_6:135219409-135219799:+|nuORF 25.399314129420983 0.2080152500878129 5 [{I|L}T]MR 4 6 45.005 0.0 0.0 4.2555 0.0 0.0 0.0 553.2829683893186 553.2829683893186 25.61960923695672 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.805462187404089 [{I|L}T]MR 4.2555 - 109 + 1 1.848 37553.5 1.0 4380 4396 8776 SUDHL4_400M_050219_1,8778 SUDHL4_400M_050219_1,8778,ITELQKNGR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8779 47.213 73.0 489290.0 25 0 89171.0 + -1 VIAPIISKM 9 53 494.3010030019718 986.5874530707435 2 494.3013183474541 MULTI CID FTMS 0 0 0 8776 623356.6875 0.2108236721650126 -1 0.0949974060058593 3 Oxidation (M) _VIAPIISKM(Oxidation (M))_ REV__ENSG00000166796|ENST00000541669|LDHC 0.4583401331227399 0.8986837419108351 5 {I|L} 1 -1 10.181 0.0 0.0 1.0319 0.0 0.0 855.4927245324609 0.0 855.4927245324609 0.0 8.58726705015016 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0319 + + 4 + 1 1.848 33906.9 1.0 4381 4396 8776 SUDHL4_400M_050219_1,8779 SUDHL4_400M_050219_1,8779,VIAPIISKM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8780 47.215 88.0 261320.0 25 0 68560.0 30946 RKPRKKMAWV 10 45 650.396263006795 1298.77797308039 2 650.3962890505791 MULTI CID FTMS 0 0 0 8776 310017.0625 0.3936647744813871 -4 0.5157470703125 4 Unmodified _RKPRKKMAWV_ ENST00000572088.1_1_17:53030934-53031141:-|nuORF 0.4583401331227399 0.7245164002484112 5 V 1 9 0.71334 0.0 0.0 0.054924 0.0 0.0 972.5839556016776 224.0989168756469 1196.6828724773245 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.054924 + + 5 + 1 1.848 30917.9 1.0 4382 4396 8776 SUDHL4_400M_050219_1,8780 SUDHL4_400M_050219_1,8780,RKPRKKMAWV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8781 47.219 182.0 363250.0 25 0 45033.0 + -1 IYRGLHMLL 9 96 566.3225267411881 1130.630500549176 2 566.3216430544853 MULTI CID FTMS 0 0 0 8776 274690.84375 0.4828036124914879 2 -0.2712211608886719 5 Oxidation (M) _IYRGLHM(Oxidation (M))LL_ REV__ENSG00000183625|ENST00000395940|CCR3;REV__nc|ENSG00000183625|P51677-2|CCR3 5.230669730166228 0.7320841359114558 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.848 54445.9 1.0 4383 4396 8776 SUDHL4_400M_050219_1,8781 SUDHL4_400M_050219_1,8781,IYRGLHMLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8782 47.225 320.0 186140.0 25 0 20594.0 + 13177 HFWLILLPAA 10 71 590.8487248521519 1179.6828967711035 2 590.8486205935478 MULTI CID FTMS 0 0 0 8776 263363.3125 0.4733455003727733 2 -0.2712211608886719 6 Unmodified _HFWLILLPAA_ REV__nc|ENSG00000211805|A0A0B4J272|TRAV24 1.844237919475145 0.7181058121064529 5 R 1 -1 2.4743 0.0 0.0 0.20974 0.0 0.0 589.3807249955163 431.1926668756469 1020.5733918711632 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.20974 - 4 + 1 1.848 53672.7 1.0 4384 4396 8776 SUDHL4_400M_050219_1,8782 SUDHL4_400M_050219_1,8782,HFWLILLPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8783 47.227 143.0 339420.0 25 0 38263.0 + 1795 ALSKEIYVI 9 89 518.3067365644745 1034.5989201957489 2 518.3081542849541 MULTI CID FTMS 0 0 0 8776 178884.625 1.0 0 0.0 7 Unmodified _ALSKEIYVI_ ENSG00000116459|ENST00000369722|ATP5PB;ENST00000567330.1_1_16:75743035-75743521:-|nuORF 19.256988751693697 0.3154191944385105 5 V{I|L} 2 7 20.573 0.0 0.0 1.9885 0.0 0.0 804.4354508127395 0.0 804.4354508127395 0.0 7.385606273598313 0.0 0.0 0 0.5 0.0 0.0 0.0 + V{I|L} 1.9885 + + 55 + 1 1.848 43753.7 1.0 4385 4396 8776 SUDHL4_400M_050219_1,8783 SUDHL4_400M_050219_1,8783,ALSKEIYVI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8784 47.241 800.0 110290.0 25 0 27351.0 + 19284 LEKQVILQPMK 11 103 663.8949529760181 1325.775353018836 2 663.8954955935478 MULTI CID FTMS 0 0 0 8776 176120.3125 0.3984645274057353 2 -0.2712211608886719 8 Unmodified _LEKQVILQPMK_ REV__ENSG00000099715|ENST00000698851|PCDH11Y;REV__ENSG00000102290|ENST00000682573|PCDH11X;REV__ENST00000361724.3_1_X:91090458-91134302:+|nuORF;REV__nc|ENSG00000099715|Q9BZA8-2|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8-3|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8-4|PCDH11Y;REV__nc|ENSG00000099715|Q9BZA8|PCDH11Y;REV__nc|ENSG00000102290|Q9BZA7-2|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-3|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-4|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-5|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-6|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X;REV__nc|ENSG00000102290|Q9BZA7-8|PCDH11X 2.735195868890462 0.8622431031272658 5 {I|L} 1 -1 9.2082 0.0 0.0 0.69455 0.0 0.0 1194.6807160332876 0.0 1194.6807160332876 0.0 3.723637474483468 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.69455 + + 19 + 1 1.848 78269.7 0.8100000023841858 4386 4396 8776 SUDHL4_400M_050219_1,8784 SUDHL4_400M_050219_1,8784,LEKQVILQPMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8785 47.249 440.0 129710.0 25 0 5519.4 -1 0 99 881.4140307134802 1760.8135084937603 2 881.4151489138603 MULTI CID FTMS 0 0 0 8776 123118.203125 0.168316767599643 2 -0.2712211608886719 9 5 EY{M(Oxidation (M))|F}ANQQA[CS]VC(Carbamidomethyl (C)){I|L} 13 -1 73.058 0.0 0.0 4.1491 0.0 0.0 229.1501306634853 0.0 229.1501306634853 0.0 65.94497187237096 0.0 0.0 0 0.6139829889124311 0.0 0.0 0.8494850021680094 EY{M(Oxidation (M))|F}ANQQA[CS]VC(Carbamidomethyl (C)){I|L} 4.1491 - 1921 + 1 1.848 42763.6 1.0 4387 4396 8776 SUDHL4_400M_050219_1,8785 SUDHL4_400M_050219_1,8785, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8786 47.253 223.0 234520.0 25 0 16533.0 + 9551 FLHDNMVEI 9 89 559.270947445341 1116.527341957482 2 559.2710449099541 MULTI CID FTMS 0 0 0 8776 121936.0390625 0.5712696319556425 -1 0.0949974060058593 10 Unmodified _FLHDNMVEI_ ENSG00000005156|ENST00000378526|LIG3;ENST00000593099.5_1_17:33324760-33324883:+|nuORF;nc|ENSG00000005156|P49916-2|LIG3;nc|ENSG00000005156|P49916-3|LIG3;nc|ENSG00000005156|P49916-4|LIG3 60.07390631473393 0.0260411565414776 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HDNMVE{I|L} 9 0 + 51.164 0.0 0.0 4.5824 4.5824 79.989 0.0 0.0 0.0 2.6760624017703094 35.67918449261214 2.6760624017703094 3.064250275506879 0 0.2742275032520141 0.0 0.0 1.079689690656103 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HDNMVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}H]|[RQ]}NMVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}W[DP]MVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[PG]DNMVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}H]|[RQ]}GGMVE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}HDGGMVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[PG]DGGMVE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[NG][DP]MVE{I|L};[VP]{[MS]|[{M(Oxidation (M))|F}A]}[DP]MVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}W[WE]QQ{I|L} 4.5824;4.308;3.9515;3.5749;3.4832;2.7907;2.7541;2.4347;2.0069;0.47935 +;-;-;-;-;-;-;-;-;- + 141 1 1.848 48346.5 1.0 4388 4396 8776 SUDHL4_400M_050219_1,8786 SUDHL4_400M_050219_1,8786,FLHDNMVEI True True FLHDNMVEI 47.253347 559.271044909954 1374741.25 8776.0 nc|ENSG00000005156|P49916-3|LIG3;;ENST00000593099.5_1_17:33324760-33324883:+|nuORF;;nc|ENSG00000005156|P49916-4|LIG3;;nc|ENSG00000005156|P49916-2|LIG3;;ENSG00000005156|ENST00000378526|LIG3 6.244072914123535 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8787 47.258 267.0 350960.0 25 0 31072.0 + 40586 VKQNRLSV 8 100 472.2878393395711 942.5611257459424 2 472.2869750857353 MULTI CID FTMS 0 0 0 8776 139678.5 0.0281463898008542 15 -1.908721923828125 11 Unmodified _VKQNRLSV_ REV__ENSG00000112414|ENST00000367609|ADGRG6;REV__ENST00000415128.6_1_6:142623466-142692070:+|nuORF;REV__ENST00000545477.1_1_6:142630681-142703096:+|nuORF;REV__nc|ENSG00000112414|Q86SQ4-2|ADGRG6;REV__nc|ENSG00000112414|Q86SQ4-4|ADGRG6;REV__nc|ENSG00000112414|Q86SQ4|ADGRG6 24.67388899826682 0.525179942228231 5 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}A{I|L}{I|L}SV 9 -1 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}A{I|L} + + 34.323 17.113 2.7365 3.6414 3.6414 55.359 0.0 0.0 0.0 0.0 23.35348113584488 0.0 0.0 0 1.0 0.0 0.75 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}A{I|L}{I|L}SV 3.6414 - 104 + 1 1.848 77595.0 1.0 4389 4396 8776 SUDHL4_400M_050219_1,8787 SUDHL4_400M_050219_1,8787,VKQNRLSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8788 47.272 800.0 113640.0 25 0 20455.0 + 7573 EIKKWLELLQA 11 113 685.9087252283123 0 685.9081909060478 PEAK CID FTMS 0 0 0 8776 106391.90625 0.2371609656072327 -4 0.5157470703125 12 Unmodified _EIKKWLELLQA_ REV__nc|ENSG00000071242|Q15349-2|RPS6KA2;REV__nc|ENSG00000071242|Q15349-3|RPS6KA2 4.897010918128616 0.4761840153648597 5 W 1 -1 2.2185 0.0 0.0 0.16196 0.0 0.0 758.4801649935243 422.2310885065063 1180.7112535000306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.16196 + + 69 + 1 1.848 79908.7 0.6499999761581421 4390 4396 8776 SUDHL4_400M_050219_1,8788 SUDHL4_400M_050219_1,8788,EIKKWLELLQA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8789 47.277 185.0 497650.0 25 0 89400.0 33289 SFQKKKKK 8 93 511.32751106738897 1020.640469201578 2 511.3273803591728 MULTI CID FTMS 0 0 0 8776 97571.3203125 0.0878595457717546 -1 0.0949974060058593 13 Unmodified _SFQKKKKK_ ENSG00000011451|ENST00000673675|WIZ;ENST00000595214.2_1_19:15547509-15549737:-|nuORF;nc|ENSG00000011451|O95785|WIZ 2.577480529830294 0.808687252328423 5 {I|L} 1 8 10.596 0.0 0.0 1.0382 0.0 0.0 889.5453439347796 0.0 889.5453439347796 0.0 1.3877444990722942 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0382 - 44 + 1 1.848 74853.6 1.0 4391 4396 8776 SUDHL4_400M_050219_1,8789 SUDHL4_400M_050219_1,8789,SFQKKKKK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8790 47.284 423.0 182490.0 25 0 23991.0 + -1 LLVGCMLM 8 105 468.7392096127669 935.4638662923338 2 468.7396423220634 MULTI CID FTMS 0 0 0 8776 92697.296875 0.0208349476487008 9 -1.1221275329589844 14 Carbamidomethyl (C) _LLVGC(Carbamidomethyl (C))MLM_ REV__ENSG00000046889|ENST00000288368|PREX2;REV__ENST00000517617.1_1_8:68864752-69023167:+|nuORF;REV__ENST00000529398.5_1_8:68864629-69017594:+|nuORF;REV__nc|ENSG00000046889|Q70Z35-3|PREX2;REV__nc|ENSG00000046889|Q70Z35-4|PREX2 17.086550045450526 0.6584923310065985 5 {I|L}{I|L}V 3 -1 42.92 0.0 0.0 4.5881 0.0 0.0 0.0 607.2049044244749 607.2049044244749 20.9556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}V 4.5881 + + 65 + 1 1.848 66044.4 1.0 4392 4396 8776 SUDHL4_400M_050219_1,8790 SUDHL4_400M_050219_1,8790,LLVGCMLM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8791 47.295 631.0 182740.0 25 0 10685.0 + 2226 AQDEHLITF 9 148 537.2663297341328 1072.5181065350655 2 537.2665283083916 MULTI CID FTMS 0 0 0 8776 92215.671875 0.2684870563264795 2 -0.2712211608886719 15 Unmodified _AQDEHLITF_ ENSG00000144028|ENST00000323853|SNRNP200 17.11289562659939 0.3734572693229295 5 {NN|[MP]|[D{I|L}]|[EV]}QVV[HD]T{M(Oxidation (M))|F} 9 6 + 23.645 0.0 0.0 2.2046 2.2046 78.625 0.0 0.0 0.0 9.041039461410143 6.729275980223196 6.729275980223196 7.310228450999897 0 0.3807196863200844 0.8860566476931632 0.2059771852360797 0.0 {NN|[MP]|[D{I|L}]|[EV]}QVV[HD]T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QA{I|L}T{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[AG]VV[HD]T{M(Oxidation (M))|F};[H{I|L}]EDQA{I|L}T{M(Oxidation (M))|F};[Y{I|L}][WC(Carbamidomethyl (C))]A{I|L}T{M(Oxidation (M))|F};[C(Carbamidomethyl (C))N]{I|L}{[HG]|PP}[KP]T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[QA]T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[AG]A{I|L}T{M(Oxidation (M))|F};[H{I|L}]ED{I|L}[QA]T{M(Oxidation (M))|F};[{I|L}T][YC(Carbamidomethyl (C))][VG]{I|L}T{M(Oxidation (M))|F} 2.2046;1.523;1.3461;1.2654;1.1864;0.88187;0.8434;0.66448;0.58572;0.57326 -;-;-;-;-;-;-;-;-;- 521 + 1 1.848 93891.5 1.0 4393 4396 8776 SUDHL4_400M_050219_1,8791 SUDHL4_400M_050219_1,8791,AQDEHLITF False True AQDEHLITF 47.295426 537.266528308392 2720284.75 8776.0 ENSG00000144028|ENST00000323853|SNRNP200 1.8831326564153037 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8792 47.3 249.0 398020.0 25 0 104780.0 40025 VGFGALLSPLI 11 102 543.8299054067115 1085.645257880223 2 544.3314086794853 MULTI CID FTMS 0 0 0 8776 88109.5 1.0 0 0.0 16 Unmodified _VGFGALLSPLI_ ENSG00000174514|ENST00000367147|MFSD4A 13.90604991867851 0.7458848613461305 5 E{I|L}{I|L} 3 9 29.693 0.0 0.0 2.735 0.0 0.0 712.4249134748062 0.0 712.4249134748062 0.0 10.02697515943353 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 E{I|L}{I|L} 2.735 - 81 1 1.848 77488.2 1.0 4394 4396 8776 SUDHL4_400M_050219_1,8792 SUDHL4_400M_050219_1,8792,VGFGALLSPLI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8793 47.314 800.0 127670.0 25 0 5884.8 + -1 FFFYCLFCFVI 11 135 781.865310890248 1561.716068847296 2 781.8670532107353 MULTI CID FTMS 0 0 0 8776 87890.5390625 0.9710327275464214 -1 0.0949974060058593 17 2 Carbamidomethyl (C) _FFFYC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))FVI_ REV__ENSG00000164197|ENST00000389100|RNF180 3.5964929083625545 0.858179447565866 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQV{I|L} 13 -1 + 83.744 0.0 0.0 5.3623 5.3623 82.682 0.0 0.0 0.0 3.4235529448454827 9.335913807240727 3.4235529448454827 3.4235529448454827 0 1.2209587969248012 1.3979400086720375 0.6109243748081782 1.274227503252014 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]NA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[HD]EA[AG]QNA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQGGA{M(Oxidation (M))|F}YQV{I|L} 5.3623;5.1431;5.0001;4.7814;4.7814;4.7814;4.5622;4.5622;4.5622;4.5622 -;-;-;-;-;-;-;-;-;- 1238 1 1.848 73801.6 0.4900000095367431 4395 4396 8776 SUDHL4_400M_050219_1,8793 SUDHL4_400M_050219_1,8793,FFFYCLFCFVI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8795 47.319 43.0 1395700.0 25 0 349850.0 7666 EKKKTYIMKP 10 70 633.3690143829892 1264.7234758327784 2 633.3695556521416 MULTI CID FTMS 0 0 0 8794 1815449.5 0.9660684622621172 -1 0.1083526611328125 1 Unmodified _EKKKTYIMKP_ ENST00000272793.9_1_2:170938445-170938493:+|nuORF 3.2813086475875832 0.7114585191678878 5 {I|L} 1 9 9.1487 0.0 0.0 0.72337 0.0 0.0 1133.6279690962533 0.0 1133.6279690962533 0.0 6.674441314624744 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.72337 + + 5 + 1 1.833 52946.4 1.0 4396 4397 8794 SUDHL4_400M_050219_1,8795 SUDHL4_400M_050219_1,8795,EKKKTYIMKP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8796 47.323 205.0 562240.0 25 0 121130.0 35170 SRSKRRHRTV 10 100 641.8826659836689 0 641.8828002810478 PEAK CID FTMS 0 0 0 8794 1239743.25 1.0 0 0.0 2 Unmodified _SRSKRRHRTV_ ENSG00000173578|ENST00000309285|XCR1 1.4819007175156935 0.3961065659209837 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.833 94364.5 1.0 4397 4397 8794 SUDHL4_400M_050219_1,8796 SUDHL4_400M_050219_1,8796,SRSKRRHRTV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8797 47.324 61.0 1353700.0 25 0 346740.0 + -1 VLIFMIKV 8 73 502.81417901067095 1003.613805088142 2 502.8142272830009 MULTI CID FTMS 0 0 0 8794 2564937.25 1.0 0 0.0 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VLIFMIKV_ REV__ENST00000483808.1_1_3:143691750-143704756:+|nuORF 0.7936320650641473 0.8195151834710337 5 P 1 -1 1.5938 0.0 0.0 0.15881 0.0 0.0 805.4955627559139 98.03797327213124 903.5335360280452 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.15881 - 3 + 1 1.833 67765.4 1.0 4398 4397 8794 SUDHL4_400M_050219_1,8797 SUDHL4_400M_050219_1,8797,VLIFMIKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8798 47.326 87.0 1122300.0 25 0 167570.0 + 13171 HFTLRHRPR 9 86 610.3483411812232 1218.6821294292463 2 610.3488647341728 MULTI CID FTMS 0 0 0 8794 689512.375 1.0 0 0.0 4 Unmodified _HFTLRHRPR_ REV__ENST00000380995.5_1_22:47569631-47570030:+|nuORF 1.844237919475145 0.850302753031785 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.833 74557.7 1.0 4399 4397 8794 SUDHL4_400M_050219_1,8798 SUDHL4_400M_050219_1,8798,HFTLRHRPR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8799 47.335 514.0 338200.0 25 0 100450.0 + -1 TMLDFPQHV 9 115 543.8530754278728 1085.6915979225455 2 543.8531982302666 MULTI CID FTMS 0 0 0 8794 586084.0625 1.0 0 0.0 5 Oxidation (M) _VLM(Oxidation (M))LIQKLL_ ENSG00000123213|ENST00000380985|NLN;ENST00000506539.5_1_5:65018131-65088776:+|nuORF 9.347437153973935 0.588369872918737 5 W 1 -1 16.99 0.0 0.0 1.5649 0.0 0.0 881.597922240708 0.0 881.597922240708 0.0 0.7557945681132878 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.5649 - 448 + 1 1.833 136043.0 1.0 4400 4397 8794 SUDHL4_400M_050219_1,8799 SUDHL4_400M_050219_1,8799,VLMLIQKLL False False TMLDFPQHV 47.335448 543.853198230267 389147.625 8794.0 ENSG00000123213|ENST00000380985|NLN;;ENST00000506539.5_1_5:65018131-65088776:+|nuORF 4.132775942484538 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8800 47.346 606.0 335390.0 25 0 102820.0 23026 LSKIFKLVR 9 140 552.3666709286422 1102.7187889240845 2 552.3668701052666 MULTI CID FTMS 0 0 0 8794 479232.1875 1.0 0 0.0 6 Unmodified _LSKIFKLVR_ ENST00000585201.5_1_18:74696670-74697120:-|nuORF 1.844237919475145 0.850302753031785 5 V{M(Oxidation (M))|F}[DN]VR{I|L} 7 7 17.197 0.0 0.0 1.5595 0.0 0.0 241.24828218755923 0.0 241.24828218755923 0.0 0.5026697949782708 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 V{M(Oxidation (M))|F}[DN]VR{I|L} 1.5595 - 90 + 1 1.833 153360.6 1.0 4401 4397 8794 SUDHL4_400M_050219_1,8800 SUDHL4_400M_050219_1,8800,LSKIFKLVR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8801 47.35 207.0 508440.0 25 0 45786.0 + 9699 FLSNDTVQL 9 125 518.7696163294266 1035.5246797256532 2 518.7693359255791 MULTI CID FTMS 0 0 0 8794 350992.5625 0.3681842832855216 -1 0.1083526611328125 7 Unmodified _FLSNDTVQL_ ENSG00000012124|ENST00000085219|CD22;nc|ENSG00000012124|P20273-2|CD22;nc|ENSG00000012124|P20273-3|CD22;nc|ENSG00000012124|P20273-4|CD22;nc|ENSG00000012124|P20273-5|CD22 25.399314129420983 0.2080152500878129 5 {[TV]|[{I|L}S]}[DN]{M(Oxidation (M))|F}T 6 5 25.256 0.0 0.0 2.439 0.0 0.0 0.0 355.1977966953603 355.1977966953603 0.0338007565955855 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.6382104921644451 0.0 {[TV]|[{I|L}S]}[DN]{M(Oxidation (M))|F}T 2.439 - 585 1 1.833 84608.3 1.0 4402 4397 8794 SUDHL4_400M_050219_1,8801 SUDHL4_400M_050219_1,8801,FLSNDTVQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8802 47.364 800.0 169910.0 25 0 61169.0 + 31096 RLLEILLRARE 11 120 691.4353106449357 1380.8560683566714 2 691.4353515505791 MULTI CID FTMS 0 0 0 8794 324984.90625 1.0 0 0.0 8 Unmodified _RLLEILLRARE_ REV__ENSG00000100425|ENST00000404760|BRD1;REV__nc|ENSG00000100425|O95696|BRD1 1.1933415558491238 0.8695176722560516 5 {I|L} 1 -1 9.7539 0.0 0.0 0.70637 0.0 0.0 1249.7609125722947 0.0 1249.7609125722947 0.0 6.654966095207122 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.70637 + + 49 + 1 1.833 106586.0 0.9700000286102296 4403 4397 8794 SUDHL4_400M_050219_1,8802 SUDHL4_400M_050219_1,8802,RLLEILLRARE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8803 47.378 800.0 287150.0 25 0 53550.0 + 17261 KLNYRLVLLHV 11 124 684.4274539936877 1366.8403550541752 2 684.4291869997978 MULTI CID FTMS 0 0 0 8794 309453.53125 1.0 0 0.0 9 Unmodified _KLNYRLVLLHV_ REV__ENST00000560723.5_1_15:81605599-81615081:-|nuORF 1.4819007175156935 0.86815623132643 5 {I|L} 1 -1 10.0 0.0 0.0 0.73161 0.0 0.0 1235.7454281516343 0.0 1235.7454281516343 0.0 -0.0886438348021556 -0.0886438348021556 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.73161 + + 250 + 1 1.833 170082.2 0.8899999856948853 4404 4397 8794 SUDHL4_400M_050219_1,8803 SUDHL4_400M_050219_1,8803,KLNYRLVLLHV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8804 47.391 800.0 256920.0 25 0 51257.0 16653 KELEKHREKL 10 138 655.3823275608848 1308.7501021885696 2 655.3829223513603 MULTI CID FTMS 0 0 0 8794 274422.8125 0.3814943527820429 3 -0.4177207946777344 10 Unmodified _KELEKHREKL_ ENSG00000234545|ENST00000445716|FAM133B;ENST00000332869.5_1_10:60475484-60475616:+|nuORF;ENST00000481407.5_1_7:92207439-92210911:-|nuORF;nc|ENSG00000234545|Q5BKY9-2|FAM133B 2.9952420565917617 0.7127817445270067 5 H 1 9 9.3323 0.0 0.0 0.71307 0.0 0.0 1153.6835566336852 0.0 1153.6835566336852 0.0 0.7488116016666613 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 0.71307 + + 40 + 1 1.833 178086.4 0.8700000047683716 4405 4397 8794 SUDHL4_400M_050219_1,8804 SUDHL4_400M_050219_1,8804,KELEKHREKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8805 47.4 388.0 227490.0 25 0 25517.0 + + 9624 FLLEKGYEV 9 128 549.2972263858169 1096.5798998384337 2 549.2977783083916 MULTI CID FTMS 0 0 0 8794 267143.28125 1.0 0 0.0 11 Unmodified _FLLNYSLDL_ ENSG00000112699|ENST00000380815|GMDS;nc|ENSG00000112699|O60547-2|GMDS 29.081581746732265 0.1611639662936252 5 {M(Oxidation (M))|F}{I|L}V{M(Oxidation (M))|F}{I|L}K[EC]V 9 -1 + 52.343 0.0 0.0 4.7733 4.7733 77.741 0.0 0.0 0.0 0.9691001300805624 0.9691001300805624 0.9691001300805624 0.9691001300805624 0 0.4247425010840047 0.0 0.8252574989159953 0.0 {M(Oxidation (M))|F}{I|L}V{M(Oxidation (M))|F}{I|L}K[EC]V;[YE]GK{I|L}{M(Oxidation (M))|F}V{I|L}E;{[QN]|[E{I|L}]|[KN]}KGY{M(Oxidation (M))|F}V{I|L}E;{M(Oxidation (M))|F}{I|L}{I|L}[{M(Oxidation (M))|F}V]K[EC]V;[YE]GK[{M(Oxidation (M))|F}V]{I|L}{I|L}E;{M(Oxidation (M))|F}{I|L}V{M(Oxidation (M))|F}{I|L}K[DC]{I|L};{[QN]|[E{I|L}]|[KN]}K[HS]E{I|L}{I|L}E;[Y{I|L}][NS]{I|L}{M(Oxidation (M))|F}V{I|L}E;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GY{M(Oxidation (M))|F}V{I|L}E;[{I|L}A][VS]GY{M(Oxidation (M))|F}V{I|L}E 4.7733;4.6849;4.4812;4.2772;4.1888;4.1359;4.0496;4.0282;3.9745;3.9688 -;-;-;-;-;-;-;-;-;- 378 + 1 1.833 69903.0 1.0 4406 4397 8794 SUDHL4_400M_050219_1,8805 SUDHL4_400M_050219_1,8805,FLLNYSLDL False False FLLEKGYEV 47.399921 549.297778308392 1970352.625 8794.0 ENSG00000112699|ENST00000380815|GMDS;;nc|ENSG00000112699|O60547-2|GMDS 5.005498806635539 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8806 47.403 167.0 282470.0 25 0 30155.0 + 20356 LLGCWAPLT 9 96 487.2636825504677 0 487.2636291384697 PEAK CID FTMS 0 0 0 8794 218649.03125 1.0 0 0.0 12 Unmodified _LLGCWAPLT_ REV__ENSG00000065923|ENST00000616978|SLC9A7;REV__nc|ENSG00000065923|Q96T83|SLC9A7 12.531546534597751 0.2832320739326029 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.71873 0.0 0.0 740.3549275015229 82.06701074771718 822.42193824924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.71873 - 21 + 1 1.833 41227.4 1.0 4407 4397 8794 SUDHL4_400M_050219_1,8806 SUDHL4_400M_050219_1,8806,LLGCWAPLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8807 47.406 146.0 376130.0 25 0 40577.0 + 36960 TFATSGVAKL 10 85 497.7811901992434 993.5478274652868 2 497.7818176150322 MULTI CID FTMS 0 0 0 8794 217171.171875 1.0 0 0.0 13 Unmodified _TFATSGVAKL_ REV__ENST00000355155.5_2_8:100025513-100050691:+|nuORF 24.020572477871973 0.4289996903560794 5 [TA]{M(Oxidation (M))|F}{I|L}G{[TV]|[{I|L}S]}TGK 10 -1 + 46.208 0.0 0.0 4.6508 4.6508 89.792 0.0 0.0 0.0 34.42531985748444 3.900925144087779 3.900925144087779 46.208056475053496 0 0.7614393726401688 1.3979400086720375 0.0 0.0 [TA]{M(Oxidation (M))|F}{I|L}G{[TV]|[{I|L}S]}TGK 4.6508 - 92 + 1 1.833 49533.0 1.0 4408 4397 8794 SUDHL4_400M_050219_1,8807 SUDHL4_400M_050219_1,8807,TFATSGVAKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8808 47.42 800.0 244260.0 25 0 20629.0 + 31550 RQLEEEGITFV 11 139 660.8430314695396 1319.671510005879 2 660.8417846560478 MULTI CID FTMS 0 0 0 8794 169551.046875 1.0 0 0.0 14 Unmodified _RQLEEEGITFV_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 36.39500950444726 0.267929034476522 5 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EEEG{I|L}T{M(Oxidation (M))|F}V 11 0 + 69.294 0.0 0.0 5.2509 5.2509 85.076 0.0 0.0 0.0 5.724925966349844 58.69813205264008 5.724925966349844 6.575773191777941 0 1.2302046884880935 0.0 0.8807196863200843 0.3807196863200844 + + {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EEEG{I|L}T{M(Oxidation (M))|F}V;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}EEW{I|L}T{M(Oxidation (M))|F}V;[{I|L}A]{[NV]|[RG]}EEEG{I|L}T{M(Oxidation (M))|F}V;[{I|L}T][KP]GQC(Carbamidomethyl (C))G{I|L}T{M(Oxidation (M))|F}V;[K{I|L}][TP]GQC(Carbamidomethyl (C))G{I|L}T{M(Oxidation (M))|F}V;{[{M(Oxidation (M))|F}H]|[RQ]}D[KP]C(Carbamidomethyl (C))G{I|L}T{M(Oxidation (M))|F}V;[{I|L}A]{[NV]|[RG]}EEW{I|L}T{M(Oxidation (M))|F}V;{[{M(Oxidation (M))|F}H]|[RQ]}[RP]SC(Carbamidomethyl (C))G{I|L}T{M(Oxidation (M))|F}V;{[QV]|[N{I|L}]|[RA]|[KV]}[W{I|L}]EEG{I|L}T{M(Oxidation (M))|F}V;[VP]GE[{I|L}A]{M(Oxidation (M))|F}AG{I|L}T{M(Oxidation (M))|F}V 5.2509;4.7526;4.6959;4.6428;4.5233;4.2842;4.1949;4.1895;4.1408;3.9771 +;-;-;-;-;-;-;-;-;- + 2465 1 1.833 143767.9 0.6499999761581421 4409 4397 8794 SUDHL4_400M_050219_1,8808 SUDHL4_400M_050219_1,8808,RQLEEEGITFV False True RQLEEEGITFV 47.41995 660.841784656048 1090136.75 8794.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 6.688042163848877 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8809 47.427 382.0 216750.0 25 0 17062.0 + 17238 KLLPETVTI 9 117 507.3161594291841 1012.6177659251682 2 507.3157836794853 MULTI CID FTMS 0 0 0 8794 166163.828125 1.0 0 0.0 15 Unmodified _KLLPETVTI_ ENSG00000108666|ENST00000577809|C17orf75;ENST00000580485.1_1_17:30665207-30669158:-|nuORF 69.10491478415734 0.0214449631113747 5 [K{I|L}]{I|L}[EP]TVT{I|L} 9 0 + 57.7 0.0 0.0 5.6981 5.6981 81.169 0.0 0.0 0.0 1.4923362619797231 14.973024840566469 1.4923362619797231 1.4923362619797231 0 1.25 0.0 1.2302046884880935 0.3054621874040891 + + [K{I|L}]{I|L}[EP]TVT{I|L};[{I|L}T][DP]{I|L}K{I|L}T{I|L};[EP]TV{I|L}K{I|L}T{I|L};[K{I|L}]{I|L}[EP]S{I|L}T{I|L};{[TV]|[{I|L}S]}[EP]{I|L}K{I|L}T{I|L};[{I|L}T][PS][R{I|L}]{I|L}T{I|L};[{I|L}T][DP]T{I|L}[K{I|L}]{I|L};[EP]TVT{I|L}[K{I|L}]{I|L};{[VA]|[{I|L}G]}QQ{I|L}K{I|L}T{I|L};{[TV]|[{I|L}S]}[TP][R{I|L}]{I|L}T{I|L} 5.6981;5.5507;5.3795;4.8074;4.6865;3.8368;3.7877;3.6165;3.3601;2.9726 +;-;-;-;-;-;-;-;-;- + 615 1 1.833 69859.0 1.0 4410 4397 8794 SUDHL4_400M_050219_1,8809 SUDHL4_400M_050219_1,8809,KLLPETVTI True True KLLPETVTI 47.4268 507.315783679485 1234383.375 8794.0 ENST00000580485.1_1_17:30665207-30669158:-|nuORF;;ENSG00000108666|ENST00000577809|C17orf75 5.021771272023519 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8810 47.436 453.0 122490.0 25 0 8026.7 + 22928 LSEAGSLVVG 10 99 466.2592793265972 0 466.2577392458916 PEAK CID FTMS 0 0 0 8794 171214.84375 1.0 0 0.0 16 Unmodified _LSEAGSLVVG_ REV__ENSG00000197077|ENST00000358431|KIAA1671 26.88365393820708 0.2428278298207118 5 VS 2 -1 6.4707 0.0 0.0 0.6954 0.0 0.0 657.3339140225319 84.04625879459218 741.380172817124 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 VS 0.6954 - 84 + 1 1.833 46671.1 1.0 4411 4397 8794 SUDHL4_400M_050219_1,8810 SUDHL4_400M_050219_1,8810,LSEAGSLVVG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8811 47.45 800.0 162600.0 25 0 18245.0 + + 14304 RLWNMPENNGL 11 142 672.4092426983802 1342.8039324635604 2 672.4116088747978 MULTI CID FTMS 0 0 0 8794 135060.5625 0.1774480129807424 -7 0.7159881591796875 17 Unmodified _IELDWKKKRK_ nc|ENSG00000138231|Q9UK59-2|DBR1;ENSG00000138231|ENST00000260803|DBR1 10.073929032068715 0.6785112666868882 5 {[QN]|[E{I|L}]|[KN]}{I|L}DVM[EP]NN 10 -1 23.294 0.0 0.0 1.7347 0.0 0.0 0.0 185.25886345404788 185.25886345404788 12.904885819643727 0.0 0.0 0.0 0 0.0 0.958607314841775 0.25 0.2614393726401688 {[QN]|[E{I|L}]|[KN]}{I|L}DVM[EP]NN 1.7347 - 1011 1 1.833 102204.0 0.5799999833106995 4412 4397 8794 SUDHL4_400M_050219_1,8811 SUDHL4_400M_050219_1,8811,IELDWKKKRK False False RLWNMPENNGL 47.449835 672.411608874798 290770.4375 8794.0 nc|ENSG00000138231|Q9UK59-2|DBR1;;ENSG00000138231|ENST00000260803|DBR1 5.080746014912923 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8812 47.457 424.0 133550.0 25 0 19468.0 + -1 FFQLICVLLL 10 80 422.58189276270446 1264.7238488883131 3 422.9166137576103 MULTI CID FTMS 0 0 0 8794 108561.5703125 1.0 0 0.0 18 Carbamidomethyl (C) _FFQLIC(Carbamidomethyl (C))VLLL_ REV__ENSG00000178904|ENST00000392250|DPY19L3;REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3 0.6976657623105312 0.723409379185497 5 S 1 -1 7.4913 0.0 0.0 0.59233 0.0 0.0 842.4837803842103 332.18662439517817 1174.6704047793885 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 S 0.59233 - 2 + 1 1.833 52890.7 1.0 4413 4397 8794 SUDHL4_400M_050219_1,8812 SUDHL4_400M_050219_1,8812,FFQLICVLLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8813 47.471 800.0 109270.0 25 0 20077.0 16219 IVLLRRNHRNP 11 115 694.4218577524073 1386.8291625716145 2 694.9238769412041 MULTI CID FTMS 0 0 0 8794 79248.234375 0.3154236653369903 -3 0.3512153625488281 19 Unmodified _IVLLRRNHRNP_ chr3:127597771-127599318|11|17.55|0.0|13.52|+|1|None,MCM2|2 1.1933415558491238 0.8695176722560516 5 {I|L} 1 10 9.464 0.0 0.0 0.68242 0.0 0.0 1255.734067822394 0.0 1255.734067822394 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.68242 + + 68 + 1 1.833 74305.4 0.4799999892711639 4414 4397 8794 SUDHL4_400M_050219_1,8813 SUDHL4_400M_050219_1,8813,IVLLRRNHRNP False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_1 8814 47.477 235.0 414040.0 25 0 53332.0 39210 TYTLTRRARV 10 93 618.8624148605818 1235.7102767879635 2 618.8627197146416 MULTI CID FTMS 0 0 0 8794 322901.9375 1.0 0 0.0 20 Unmodified _TYTLTRRARV_ ENSG00000165914|ENST00000328459|TTC7B;nc|ENSG00000165914|Q86TV6-2|TTC7B 1.6526216038709556 0.7189921496796233 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.833 76353.6 1.0 4415 4397 8794 SUDHL4_400M_050219_1,8814 SUDHL4_400M_050219_1,8814,TYTLTRRARV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8816 47.482 26.0 1789800.0 25 0 210250.0 + 41013 VMAPRTVLL 9 65 500.3043602527504 998.5941675723008 2 500.3050109744072 MULTI CID FTMS 0 0 0 8815 1254739.125 0.1061768354027735 3 -0.3846664428710937 1 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 22.736283301280096 0.2418982879461534 5 VMA 3 6 51.198 0.0 0.0 5.127 0.0 0.0 0.0 694.4272554325646 694.4272554325646 15.452490459521968 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + VMA 5.127 + + 52 + 1 1.833 41062.0 1.0 4416 4398 8815 SUDHL4_400M_050219_1,8816 SUDHL4_400M_050219_1,8816,VMAPRTVLL False True VMAPRTVLL 47.481585 500.305010974407 102142328.0 8815.0 ENSG00000234745|ENST00000412585|HLA-B;;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;;ENST00000498007.1_1_6:31324459-31324935:-|nuORF 1.1482581347227097 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8817 47.483 21.0 2535900.0 25 0 607670.0 11356 GFRRARPK 8 62 494.3010030019718 986.5874530707435 2 494.3014099001884 MULTI CID FTMS 0 0 0 8815 2401768.5 0.8122952155867488 1 -0.1101608276367187 2 Unmodified _GFRRARPK_ ENSG00000038274|ENST00000321757|MAT2B;ENST00000519719.1_1_5:162930400-162939205:+|nuORF;ENST00000523606.1_1_5:162932677-162939205:+|nuORF;nc|ENSG00000038274|Q9NZL9-2|MAT2B;nc|ENSG00000038274|Q9NZL9-3|MAT2B;nc|ENSG00000038274|Q9NZL9-4|MAT2B;nc|ENSG00000038274|Q9NZL9-5|MAT2B 0.7936320650641473 0.8195151834710337 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.833 46781.2 1.0 4417 4398 8815 SUDHL4_400M_050219_1,8817 SUDHL4_400M_050219_1,8817,GFRRARPK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8818 47.485 78.0 478510.0 25 0 121150.0 + 19953 LIELFRPLLW 10 61 650.396263006795 1298.77797308039 2 650.3968383669853 MULTI CID FTMS 0 0 0 8815 625730.375 0.7945627410766425 -2 0.2712211608886719 3 Unmodified _LIELFRPLLW_ REV__ENST00000434494.5_1_15:44038867-44063413:+|nuORF 3.944395688203298 0.708391353636983 5 K 1 -1 3.0989 0.0 0.0 0.2386 0.0 0.0 884.5314958848807 283.11921106510005 1167.6507069499808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.2386 - 10 + 1 1.833 40968.0 1.0 4418 4398 8815 SUDHL4_400M_050219_1,8818 SUDHL4_400M_050219_1,8818,LIELFRPLLW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8819 47.487 131.0 524600.0 25 0 51475.0 + 17188 KLLDFSTRI 9 80 546.8235861825917 1091.6326194319834 2 546.8249389529228 MULTI CID FTMS 0 0 0 8815 310488.6875 1.0 0 0.0 4 Unmodified _KLLDFSTRI_ ENST00000521797.1_1_5:162884004-162884578:-|nuORF 19.361941925380144 0.3125782356748823 5 K{I|L}{I|L}D{M(Oxidation (M))|F} 5 4 47.875 0.0 0.0 4.3857 0.0 0.0 0.0 472.2508028619751 472.2508028619751 37.27930874612733 0.0 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.0 + K{I|L}{I|L}D{M(Oxidation (M))|F} 4.3857 + + 95 + 1 1.833 59814.1 1.0 4419 4398 8815 SUDHL4_400M_050219_1,8819 SUDHL4_400M_050219_1,8819,KLLDFSTRI False True KLLDFSTRI 47.487241 546.824938952923 2239678.5 8815.0 ENST00000521797.1_1_5:162884004-162884578:-|nuORF 3.518470207850138 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8820 47.49 150.0 319540.0 25 0 53490.0 + 37251 TIMPKDIQL 9 82 529.7989044186373 1057.5832559040746 2 529.7989379763603 MULTI CID FTMS 0 0 0 8815 281941.4375 0.0993514517663036 3 -0.3846664428710937 5 Unmodified _TIMPKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 14.838274106304384 0.4350285940865338 5 [{I|L}T][YV]Q{I|L}DP 8 6 39.117 0.0 0.0 3.6988 0.0 0.0 0.0 125.07254968814688 125.07254968814688 26.01850649356642 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T][YV]Q{I|L}DP 3.6988 - 298 + 1 1.833 40837.9 1.0 4420 4398 8815 SUDHL4_400M_050219_1,8820 SUDHL4_400M_050219_1,8820,TIMPKDIQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8821 47.496 328.0 150630.0 25 0 41654.0 7334 EFFPRRKVFK 10 71 677.3952702999136 1352.775987666627 2 677.3952514529228 MULTI CID FTMS 0 0 0 8815 241241.75 0.4857700990476315 -2 0.2712211608886719 6 Unmodified _EFFPRRKVFK_ ENST00000305135.9_1_3:183529275-183529383:+|nuORF 1.4819007175156935 0.719781833666733 5 {I|L} 1 10 9.6777 0.0 0.0 0.7154 0.0 0.0 1221.6809234349848 0.0 1221.6809234349848 0.0 9.400123414616251 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.7154 - 10 + 1 1.833 54476.4 1.0 4421 4398 8815 SUDHL4_400M_050219_1,8821 SUDHL4_400M_050219_1,8821,EFFPRRKVFK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8822 47.502 344.0 227630.0 25 0 19527.0 + 30913 RITNQVIYL 9 104 560.3300858877835 1118.645618842367 2 560.3298217654228 MULTI CID FTMS 0 0 0 8815 151742.15625 1.0 0 0.0 7 Unmodified _RITNQVIYL_ ENSG00000197102|ENST00000360184|DYNC1H1 17.11289562659939 0.3734572693229295 5 {I|L}[HV]QV{I|L}Y{I|L} 8 3 32.638 0.0 0.0 2.9176 0.0 0.0 135.0687733380875 0.0 135.0687733380875 0.0 19.45046257204389 0.0 0.0 0 0.6435078169319297 0.0 0.0 0.3807196863200844 {I|L}[HV]QV{I|L}Y{I|L} 2.9176 - 133 1 1.833 66353.8 1.0 4422 4398 8815 SUDHL4_400M_050219_1,8822 SUDHL4_400M_050219_1,8822,RITNQVIYL False True RITNQVIYL 47.502441 560.329821765423 573735.0 8815.0 ENSG00000197102|ENST00000360184|DYNC1H1 4.067152182261149 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8823 47.506 213.0 236240.0 25 0 35485.0 + 31090 RLLEATSYL 9 65 533.300066251821 1064.585579570442 2 533.3006469607353 MULTI CID FTMS 0 0 0 8815 150463.734375 0.1349188862473982 2 -0.254852294921875 8 Unmodified _RLLEATSYL_ ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A 26.268140514670165 0.1969607489560049 5 ATSY{I|L} 5 4 49.24 0.0 0.0 4.6253 0.0 0.0 511.31334120918126 0.0 511.31334120918126 0.0 42.25054710168188 0.0 0.0 0 0.8807196863200843 0.0 0.8494850021680094 0.0 + ATSY{I|L} 4.6253 + + 42 1 1.833 48089.9 1.0 4423 4398 8815 SUDHL4_400M_050219_1,8823 SUDHL4_400M_050219_1,8823,RLLEATSYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8824 47.51 193.0 426810.0 25 0 33195.0 + 24617 MLLQWLLL 8 120 515.3096922427451 1028.60483155229 2 515.3102905154228 MULTI CID FTMS 0 0 0 8815 142313.78125 0.2283818743253041 2 -0.254852294921875 9 Unmodified _MLLQWLLL_ REV__ENSG00000173064|ENST00000682272|HECTD4;REV__ENST00000311694.7_1_12:112687934-112711582:-|nuORF;REV__nc|ENSG00000173064|Q9Y4D8-2|HECTD4;REV__nc|ENSG00000173064|Q9Y4D8-3|HECTD4;REV__nc|ENSG00000173064|Q9Y4D8-4|HECTD4;REV__nc|ENSG00000173064|Q9Y4D8-5|HECTD4;REV__nc|ENSG00000173064|Q9Y4D8|HECTD4 26.34127834903884 0.4900704351052977 5 AD{I|L} 3 -1 32.677 0.0 0.0 3.1769 0.0 0.0 711.4648850351621 0.0 711.4648850351621 0.0 15.397131498072124 0.0 0.0 0 1.0994850021680094 0.0 0.0 0.0 AD{I|L} 3.1769 - 365 1 1.833 67419.9 1.0 4424 4398 8815 SUDHL4_400M_050219_1,8824 SUDHL4_400M_050219_1,8824,MLLQWLLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8825 47.524 800.0 91361.0 25 0 5983.9 8581 ETRRRAVIY 9 130 582.3351787629199 1162.6558045926397 2 582.3359252810478 MULTI CID FTMS 0 0 0 8815 111320.5703125 0.2208106479547858 3 -0.3846664428710937 10 Unmodified _ETRRRAVIY_ ENSG00000197953|ENST00000356517|AADACL2 4.75600775471527 0.7486543447549536 5 Y 1 8 12.474 0.0 0.0 1.0729 0.0 0.0 981.5814770553336 0.0 981.5814770553336 0.0 1.580352050506404 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.0729 + + 86 + 1 1.833 57142.6 0.5799999833106995 4425 4398 8815 SUDHL4_400M_050219_1,8825 SUDHL4_400M_050219_1,8825,ETRRRAVIY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8826 47.538 800.0 109870.0 25 0 7103.8 -1 VSLRLMRPLP 10 121 599.3617691859602 1196.7089854387202 2 599.3604003787041 MULTI CID FTMS 0 0 0 8815 101918.9375 0.2476653366595282 4 -0.5318374633789062 11 Oxidation (M) _VSLRLM(Oxidation (M))RPLP_ ENST00000508471.5_1_4:2272067-2272400:-|nuORF 6.723162845929126 0.6955379296933136 5 [VS]{I|L}{[WN]|[YH]}V 6 -1 12.672 0.0 0.0 1.0589 0.0 0.0 0.0 495.310461839364 495.310461839364 3.9486098464560735 0.0 0.0 0.0 0 0.0 0.0 0.9027084789088669 0.0 [VS]{I|L}{[WN]|[YH]}V 1.0589 - 590 1 1.833 68132.0 0.5799999833106995 4426 4398 8815 SUDHL4_400M_050219_1,8826 SUDHL4_400M_050219_1,8826,VSLRLMRPLP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8827 47.548 565.0 212790.0 25 0 26347.0 + 11150 GEKLPDVVL 9 164 485.28476429732166 0 485.2852661013603 PEAK CID FTMS 0 0 0 8815 95759.3046875 0.7273385674151702 -1 0.1628684997558593 12 Unmodified _GEKLPDVVL_ ENSG00000113356|ENST00000651687|POLR3G 36.12702656103203 0.0807574182900477 5 V[DP]VQE 6 6 23.561 0.0 0.0 2.4326 0.0 0.0 230.1615512444984 68.05140863590077 298.2129598803992 0.0 0.0 0.0 0.0 0 0.5 0.0 0.6237125054200234 0.7887254899964358 V[DP]VQE 2.4326 - 353 + 1 1.833 92157.9 1.0 4427 4398 8815 SUDHL4_400M_050219_1,8827 SUDHL4_400M_050219_1,8827,GEKLPDVVL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8828 47.549 63.0 808270.0 25 0 273000.0 40106 VGKYVPVTRHP 11 29 626.8644664526912 1251.7143799721823 2 627.3671752810478 MULTI CID FTMS 0 0 0 8815 877430.875 0.8966575096926797 1 -0.1101608276367187 13 Unmodified _VGKYVPVTRHP_ ENST00000270066.10_1_19:44232892-44233246:-|nuORF 2.9952420565917617 0.861016188266951 5 M 1 11 4.6041 0.0 0.0 0.36782 0.0 0.0 661.3754650325324 456.2759462255203 1117.6514112580526 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.36782 - 3 + 1 1.833 45487.2 1.0 4428 4398 8815 SUDHL4_400M_050219_1,8828 SUDHL4_400M_050219_1,8828,VGKYVPVTRHP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8829 47.565 800.0 150020.0 25 0 44335.0 + 18153 KTPQVKYKFLL 11 116 682.92155370902 1363.82855448484 2 682.9216796755791 MULTI CID FTMS 0 0 0 8815 140965.90625 0.543043572029935 1 -0.1101608276367187 14 Unmodified _KTPQVKYKFLL_ REV__ENSG00000198604|ENST00000360310|BAZ1A;REV__nc|ENSG00000198604|Q9NRL2-2|BAZ1A 4.5288652416199255 0.8537804541365391 5 {I|L} 1 -1 10.181 0.0 0.0 0.74651 0.0 0.0 1232.7336428410883 0.0 1232.7336428410883 0.0 0.271798117787581 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.74651 + + 104 + 1 1.833 97356.8 0.699999988079071 4429 4398 8815 SUDHL4_400M_050219_1,8829 SUDHL4_400M_050219_1,8829,KTPQVKYKFLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8830 47.573 480.0 197310.0 25 0 12480.0 + 35898 SVMRLTISY 9 143 535.2878004527432 1068.5610479722864 2 535.2891723513603 MULTI CID FTMS 0 0 0 8815 118374.4375 1.0 0 0.0 15 Unmodified _SVMRLTISY_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 32.78568957990786 0.1150597335874693 5 [VS]{I|L}G{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SY 10 4 + 50.505 0.0 0.0 4.7264 4.7264 84.359 0.0 0.0 0.0 10.43305028184122 14.14651886415512 10.43305028184122 8.26606256887672 0 1.424742501084005 1.5228787452803376 0.6237125054200234 0.0 [VS]{I|L}G{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SY;[VS]{I|L}G{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}SY;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SY;[VS]{I|L}[TA]{[ES]|[DT]|[{I|L}C]}{I|L}SY;[K{I|L}]D{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SY;{[TV]|[{I|L}S]}VG{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SY;[{I|L}A][TA]{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SY;[{I|L}V]SG{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}SY;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}SY;{[QN]|[E{I|L}]|[KN]}[KT]{[ES]|[DT]|[{I|L}C]}{I|L}SY 4.7264;3.9529;3.7501;3.4444;3.3982;3.1579;3.0672;3.0084;2.9765;2.6642 -;-;-;-;-;-;-;-;-;- 708 1 1.833 75734.3 1.0 4430 4398 8815 SUDHL4_400M_050219_1,8830 SUDHL4_400M_050219_1,8830,SVMRLTISY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8831 47.587 800.0 218100.0 25 0 26124.0 + 20112 LKEVLEFGIQ 10 168 588.3354084605407 1174.6562639878814 2 588.3358032107353 MULTI CID FTMS 0 0 0 8815 87315.65625 0.1905911406426509 -3 0.3662185668945312 16 Unmodified _LKEVLEFGIQ_ REV__ENSG00000162607|ENST00000339950|USP1 7.101721422024254 0.6937868747866316 5 V 1 -1 9.6777 0.0 0.0 0.82388 0.0 0.0 1057.5767026859266 0.0 1057.5767026859266 0.0 0.4695225143416603 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.82388 + + 428 + 1 1.833 131745.1 0.5400000214576721 4431 4398 8815 SUDHL4_400M_050219_1,8831 SUDHL4_400M_050219_1,8831,LKEVLEFGIQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8833 47.592 35.0 1359200.0 25 0 331620.0 + 3496 CKVVVVLIVYM 11 58 633.3690143829892 1264.7234758327784 2 633.3696777224541 MULTI CID FTMS 0 0 0 8832 1636705.625 0.8709521726269485 1 -0.1446914672851562 1 Unmodified _CKVVVVLIVYM_ REV__ENST00000508360.5_1_4:89653076-89671014:-|nuORF 1.3295316138638542 0.8688751186870782 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.833 44671.9 1.0 4432 4399 8832 SUDHL4_400M_050219_1,8833 SUDHL4_400M_050219_1,8833,CKVVVVLIVYM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8834 47.594 73.0 1236400.0 25 0 307230.0 -1 LLMKDIKK 8 78 502.81417901067095 1003.613805088142 2 502.8143493533134 MULTI CID FTMS 0 0 0 8832 1115416.375 0.4348708238378931 2 -0.274505615234375 2 Oxidation (M) _LLM(Oxidation (M))KDIKK_ ENST00000466685.7_1_3:141923399-141944297:-|nuORF 2.302733041254933 0.8103549651115762 5 {I|L} 1 -1 9.9148 0.0 0.0 0.98791 0.0 0.0 872.5191070674373 0.0 872.5191070674373 0.0 8.805589555424316 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.98791 + + 7 + 1 1.833 72219.7 1.0 4433 4399 8832 SUDHL4_400M_050219_1,8834 SUDHL4_400M_050219_1,8834,LLMKDIKK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8835 47.596 126.0 432980.0 25 0 90021.0 26548 NVIQRRGRAGR 11 65 641.8826659836689 0 641.8827392458916 PEAK CID FTMS 0 0 0 8832 1036956.6875 0.8364285810791872 2 -0.274505615234375 3 Unmodified _NVIQRRGRAGR_ ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30;nc|ENSG00000132153|Q7L2E3-3|DHX30 1.1933415558491238 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.833 47961.8 1.0 4434 4399 8832 SUDHL4_400M_050219_1,8835 SUDHL4_400M_050219_1,8835,NVIQRRGRAGR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8836 47.599 159.0 545010.0 25 0 88383.0 41033 VMGKIFAV 8 95 432.7541694235484 863.4937859138969 2 432.7541992068291 MULTI CID FTMS 0 0 0 8832 463462.65625 1.0 0 0.0 4 Unmodified _VMGKIFAV_ ENSG00000145332|ENST00000273963|KLHL8;nc|ENSG00000145332|Q9P2G9-2|KLHL8 28.17323086031832 0.4514957916281387 5 VM 2 6 41.013 0.0 0.0 4.7497 0.0 0.0 0.0 630.3631595373524 630.3631595373524 24.33861456121896 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 + VM 4.7497 + + 282 + 1 1.833 70805.7 1.0 4435 4399 8832 SUDHL4_400M_050219_1,8836 SUDHL4_400M_050219_1,8836,VMGKIFAV False True KGLFMGLV 47.599355 432.754199206829 3531762.25 8832.0 nc|ENSG00000175894|Q8WU66-2|TSPEAR;;ENSG00000175894|ENST00000323084|TSPEAR 0.6458337306976318 2.0 False 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8837 47.61 633.0 265190.0 25 0 40369.0 29467 QLIIIFKF 8 156 511.32751106738897 1020.640469201578 2 511.3276244997978 MULTI CID FTMS 0 0 0 8832 449476.40625 0.4047377114685456 2 -0.274505615234375 5 Unmodified _QLIIIFKF_ ENSG00000173662|ENST00000333172|TAS1R1;nc|ENSG00000173662|Q7RTX1-2|TAS1R1 8.593279151180031 0.7721714526254883 5 {I|L}D{I|L}{I|L}EP 6 5 23.549 0.0 0.0 2.3073 0.0 0.0 239.20768219161545 98.03789697818593 337.2455791698014 0.0 0.0 0.0 0.0 0 0.0 0.0 1.610924374808178 0.0 {I|L}D{I|L}{I|L}EP 2.3073 - 302 + 1 1.833 129267.9 1.0 4436 4399 8832 SUDHL4_400M_050219_1,8837 SUDHL4_400M_050219_1,8837,QLIIIFKF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8838 47.614 213.0 383980.0 25 0 22446.0 + 39659 RLYDPASGTISL 12 87 646.8461946997779 1291.6778364663558 2 646.8461181521416 MULTI CID FTMS 0 0 0 8832 300999.28125 1.0 0 0.0 6 Unmodified _VEDFREGKLSL_ ENSG00000135776|ENST00000344517|ABCB10 32.037481411007896 0.3399527776090619 5 {[TV]|[{I|L}S]}[NS][WK]SGT{I|L}S{I|L} 12 7 + 65.556 0.0 0.0 5.0753 5.0753 91.306 0.0 0.0 0.0 3.2366368737751827 58.56668758921828 3.2366368737751827 65.55638763257846 0 0.9247425010840048 1.3010299956639813 1.424742501084005 0.0 {[TV]|[{I|L}S]}[NS][WK]SGT{I|L}S{I|L} 5.0753 - 237 1 1.833 67597.8 1.0 4437 4399 8832 SUDHL4_400M_050219_1,8838 SUDHL4_400M_050219_1,8838,VEDFREGKLSL False False RLYDPASGTISL 47.614455 646.846118152142 2851950.75 8832.0 ENSG00000135776|ENST00000344517|ABCB10 7.037960529327393 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8839 47.621 373.0 215970.0 25 0 22325.0 + 14621 IIIGQESITY 10 114 568.8132786116505 1135.612004290101 2 568.8136474490166 MULTI CID FTMS 0 0 0 8832 299990.5625 1.0 0 0.0 7 Unmodified _IIIGQESITY_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61091835-61095006:-|nuORF 36.12702656103203 0.1984647928738587 5 [{I|L}A]NES{I|L}{I|L} 7 6 36.335 0.0 0.0 3.1996 0.0 0.0 0.0 392.1824836414451 392.1824836414451 11.400020552360672 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.274227503252014 0.2614393726401688 [{I|L}A]NES{I|L}{I|L} 3.1996 - 731 1 1.833 67135.6 1.0 4438 4399 8832 SUDHL4_400M_050219_1,8839 SUDHL4_400M_050219_1,8839,IIIGQESITY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8840 47.627 297.0 357960.0 25 0 48437.0 + -1 KLWESPNVL 9 130 543.3040987132179 542.2968222466178 1 543.3041259646416 MULTI CID FTMS 0 0 0 8832 248259.28125 1.0 0 0.0 8 ENST00000471809.5_1_22:37159849-37172159:-|nuORF;ENSG00000100360|ENST00000433985|IFT27;nc|ENSG00000100360|Q9BW83-2|IFT27 5 T[NP]V{I|L} 5 -1 + 13.729 0.0 0.0 2.5316 2.5316 83.228 0.0 0.0 0.0 0.2338718988881574 0.629778129126283 0.2338718988881574 13.728721920568251 0 0.0 0.0 0.0 0.2302046884880938 T[NP]V{I|L} 2.5316 - 77 + 1 1.833 88791.9 1.0 4439 4399 8832 SUDHL4_400M_050219_1,8840 SUDHL4_400M_050219_1,8840, False False KLWESPNVL 47.626622 543.304125964642 2216681.25 8832.0 ENST00000471809.5_1_22:37159849-37172159:-|nuORF;;ENSG00000100360|ENST00000433985|IFT27;;nc|ENSG00000100360|Q9BW83-2|IFT27 7.256846904754639 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8841 47.632 280.0 298010.0 25 0 40278.0 + 34075 SLLFAIFF 8 106 479.2772788638295 0 479.2781860232353 PEAK CID FTMS 0 0 0 8832 242244.921875 1.0 0 0.0 9 Unmodified _SLLFAIFF_ REV__ENSG00000173040|ENST00000344408|EVC2;REV__nc|ENSG00000173040|Q86UK5-2|EVC2;REV__nc|ENSG00000173040|Q86UK5-3|EVC2 2.577480529830294 0.5910327097116076 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.833 67711.1 1.0 4440 4399 8832 SUDHL4_400M_050219_1,8841 SUDHL4_400M_050219_1,8841,SLLFAIFF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8842 47.636 253.0 321010.0 25 0 41671.0 -1 0 88 472.2825214331834 471.2752449665834 1 472.2821838259697 MULTI CID FTMS 0 0 0 8832 243276.296875 0.3843362533280198 1 -0.1446914672851562 10 5 SV 2 -1 21.479 0.0 0.0 4.5577 0.0 0.0 267.1638843482225 0.0 267.1638843482225 0.0 10.883468048124332 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 SV 4.5577 - 21 + 1 1.833 69276.8 1.0 4441 4399 8832 SUDHL4_400M_050219_1,8842 SUDHL4_400M_050219_1,8842, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8843 47.647 615.0 236340.0 25 0 26411.0 20554 LLMERLSL 8 159 487.78947147003566 973.5643900068712 2 487.7912475466728 MULTI CID FTMS 0 0 0 8832 194365.203125 1.0 0 0.0 11 Unmodified _LLMERLSL_ ENSG00000183785|ENST00000330423|TUBA8;nc|ENSG00000183785|Q9NY65-2|TUBA8 9.347437153973935 0.7675937258251505 5 {I|L} 1 7 12.218 0.0 0.0 1.255 0.0 0.0 842.4694173279636 0.0 842.4694173279636 0.0 2.7545373444029053 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.255 + + 144 + 1 1.833 116386.3 1.0 4442 4399 8832 SUDHL4_400M_050219_1,8843 SUDHL4_400M_050219_1,8843,LLMERLSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8844 47.656 442.0 334800.0 25 0 31684.0 + 43978 YIDEGRLVL 9 148 539.3018701573744 0 539.3017455935478 PEAK CID FTMS 0 0 0 8832 147426.359375 1.0 0 0.0 12 Unmodified _YIDEGRLVL_ ENSG00000057252|ENST00000367619|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;nc|ENSG00000057252|P35610-3|SOAT1 43.77239144664712 0.0487019148086553 5 {I|L}DE 3 6 27.026 0.0 0.0 2.5103 0.0 0.0 163.0642973071519 553.3473003982112 716.4115977053632 0.0 0.0 0.0 0.0 0 1.0356668758921828 0.0 0.5866968715561641 0.0 + {I|L}DE 2.5103 + + 146 + 1 1.833 117408.2 1.0 4443 4399 8832 SUDHL4_400M_050219_1,8844 SUDHL4_400M_050219_1,8844,YIDEGRLVL True True YIDEGRLVL 47.656215 539.301 1095814.875 8832.0 nc|ENSG00000057252|P35610-2|SOAT1;;ENSG00000057252|ENST00000367619|SOAT1;;nc|ENSG00000057252|P35610-3|SOAT1 5.076343059539795 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8845 47.67 800.0 240930.0 25 0 20706.0 + 28698 PVRYPVQPLR 10 139 612.8614908470721 1223.708428760944 2 612.8618041872978 MULTI CID FTMS 0 0 0 8832 132045.40625 0.3122932110743486 -1 0.1101608276367187 13 Unmodified _PVRYPVQPLR_ REV__ENST00000392185.7_2_6:158365060-158365285:+|nuORF 3.5964929083625545 0.7100006075494749 5 {I|L} 1 -1 10.596 0.0 0.0 0.86589 0.0 0.0 1092.613639187505 0.0 1092.613639187505 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.86589 + + 29 + 1 1.833 143296.9 0.5400000214576721 4444 4399 8832 SUDHL4_400M_050219_1,8845 SUDHL4_400M_050219_1,8845,PVRYPVQPLR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8846 47.684 800.0 144290.0 25 0 15767.0 + 44401 YLYDLNHTL 9 145 576.290224388987 1150.565895844774 2 576.2908203005791 MULTI CID FTMS 0 0 0 8832 118894.7890625 1.0 0 0.0 14 Unmodified _YLYDLNHTL_ ENSG00000110057|ENST00000227471|UNC93B1 60.07390631473393 0.0260411565414776 5 Y{I|L}YD{I|L}NHT{I|L} 9 0 + 79.294 0.0 0.0 6.8917 6.8917 94.192 0.0 0.0 0.0 53.96691620732459 0.7131159503306321 0.7131159503306321 13.45561255036381 0 0.4247425010840047 2.0 1.642159058960253 0.4247425010840047 + + Y{I|L}YD{I|L}NHT{I|L};Y{I|L}YD{I|L}GGHT{I|L};Y{I|L}Y[{M(Oxidation (M))|F}V]T[KS]M;Y{I|L}YDG{[VA]|[{I|L}G]}HT{I|L};Y{I|L}Y[PG]{[MG]|[TS]}HT{I|L};Y{I|L}[WM]{[MG]|[TS]}HT{I|L};[RH]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}NHT{I|L};[Y{I|L}]{[RE]|[WV]}{[YD]|[{M(Oxidation (M))|F}M]}[RH];[RH]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}GGHT{I|L};[RH]{[WN]|[YH]}{[MG]|[TS]}HT{I|L} 6.8917;5.7223;5.0404;4.7644;4.596;3.959;1.321;0.824;0.52069;0.19471 +;-;-;-;-;-;-;-;-;- + 588 + 1 1.833 89188.8 0.5 4445 4399 8832 SUDHL4_400M_050219_1,8846 SUDHL4_400M_050219_1,8846,YLYDLNHTL True True YLYDLNHTL 47.683888 576.290820300579 451752.46875 8832.0 ENSG00000110057|ENST00000227471|UNC93B1 6.34443728129069 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8847 47.699 800.0 213210.0 25 0 25240.0 + 18880 LASYEIKQKI 10 122 596.8489125862759 1191.6832722393517 2 596.8486205935478 MULTI CID FTMS 0 0 0 8832 102870.796875 0.4456296424048279 -1 0.1101608276367187 15 Unmodified _LASYEIKQKI_ REV__ENSG00000174527|ENST00000310903|MYO1H;REV__nc|ENSG00000174527|Q8N1T3-2|MYO1H;REV__nc|ENSG00000174527|Q8N1T3-3|MYO1H;REV__nc|ENSG00000174527|Q8N1T3|MYO1H 3.944395688203298 0.708391353636983 5 {M(Oxidation (M))|F} 1 -1 5.401 0.0 0.0 0.45322 0.0 0.0 449.2814910887642 592.2920015924436 1041.573492681208 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.45322 - 11 + 1 1.833 128837.4 0.4799999892711639 4446 4399 8832 SUDHL4_400M_050219_1,8847 SUDHL4_400M_050219_1,8847,LASYEIKQKI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8848 47.713 800.0 126000.0 25 0 6670.5 + 10304 FSCFCLVGTY 10 146 570.2461591645367 1138.4777653958731 2 570.2461425662041 MULTI CID FTMS 0 0 0 8832 88083.4609375 1.0 0 0.0 16 Unmodified _FSCFCLVGTY_ ENST00000484538.1_1_2:63826339-63826555:+|nuORF 10.073929032068715 0.6785112666868882 5 [H{I|L}][YR]{[ES]|[DT]|[{I|L}C]}{I|L}{I|L} 8 8 24.67 0.0 0.0 2.167 0.0 0.0 0.0 123.89046005823585 123.89046005823585 9.36259170921218 0.0 0.0 0.0 0 0.0 1.154901959985743 0.8494850021680094 0.2742275032520141 [H{I|L}][YR]{[ES]|[DT]|[{I|L}C]}{I|L}{I|L} 2.167 - 384 1 1.833 80249.8 0.4600000083446502 4447 4399 8832 SUDHL4_400M_050219_1,8848 SUDHL4_400M_050219_1,8848,FSCFCLVGTY False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8849 47.717 205.0 230640.0 25 0 26328.0 20458 LLKNAQLEL 9 90 521.3192969255365 1040.624040917873 2 521.3198730349541 MULTI CID FTMS 0 0 0 8832 185197.9375 1.0 0 0.0 17 Unmodified _LLKNAQLEL_ ENSG00000168259|ENST00000457167|DNAJC7;nc|ENSG00000168259|Q99615-2|DNAJC7 26.88365393820708 0.1891292719743517 5 {I|L}{I|L}KAQN{I|L}E{I|L} 9 2 + 61.806 0.0 0.0 5.9393 5.9393 89.801 0.0 0.0 0.0 15.38673012463569 39.12971259689115 15.38673012463569 9.208187539523747 0 0.4247425010840047 1.3010299956639813 0.0 0.4247425010840047 {I|L}{I|L}KAQN{I|L}E{I|L};{I|L}{I|L}KA[AG]N{I|L}E{I|L};{I|L}{I|L}KAQGG{I|L}E{I|L};{I|L}{I|L}KA[AG]GG{I|L}E{I|L} 5.9393;5.0544;5.0544;4.1738 -;-;-;- 220 1 1.833 44888.6 1.0 4448 4399 8832 SUDHL4_400M_050219_1,8849 SUDHL4_400M_050219_1,8849,LLKNAQLEL False True KLIAQNLEL 47.716646 521.319873034954 1292887.375 8832.0 ENSG00000138160|ENST00000260731|KIF11 2.3883212208747864 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8850 47.732 800.0 90685.0 25 0 20166.0 + 42057 VQVLKRDLEAR 11 89 663.8955472668355 1325.7765416004709 2 663.8959838747978 MULTI CID FTMS 0 0 0 8832 153323.125 0.1436526108062844 -5 0.6242446899414062 18 Unmodified _VQVLKRDLEAR_ REV__ENSG00000124074|ENST00000243878|ENKD1;REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1 2.735195868890462 0.8622431031272658 5 {I|L} 1 -1 10.485 0.0 0.0 0.79082 0.0 0.0 1194.6814010748833 0.0 1194.6814010748833 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.79082 + + 52 + 1 1.833 69281.2 0.6399999856948853 4449 4399 8832 SUDHL4_400M_050219_1,8850 SUDHL4_400M_050219_1,8850,VQVLKRDLEAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8852 47.738 100.0 547190.0 25 0 45401.0 + 41014 VMAPRTVLL 9 73 500.3043602527504 998.5941675723008 2 500.3047057986259 MULTI CID FTMS 0 0 0 8851 429740.96875 0.0363649584169914 5 -0.5960540771484375 1 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 22.736283301280096 0.2418982879461534 5 VMA 3 6 51.198 0.0 0.0 5.127 0.0 0.0 0.0 694.4260850782854 694.4260850782854 17.269987279362624 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + VMA 5.127 + + 111 + 1 1.829 49013.5 1.0 4450 4400 8851 SUDHL4_400M_050219_1,8852 SUDHL4_400M_050219_1,8852,VMAPRTVLL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8853 47.741 145.0 233040.0 25 0 16672.0 + 42698 VTYDNALQL 9 63 518.7696163294266 1035.5246797256532 2 518.7696411013603 MULTI CID FTMS 0 0 0 8851 279817.6875 0.2935232416008803 2 -0.2769851684570312 2 Unmodified _VTYDNALQL_ REV__ENSG00000025770|ENST00000420993|NCAPH2;REV__nc|ENSG00000025770|Q6IBW4-2|NCAPH2;REV__nc|ENSG00000025770|Q6IBW4-4|NCAPH2 12.531546534597751 0.4974689918368763 5 Q{I|L} 2 -1 18.443 0.0 0.0 1.7811 0.0 0.0 776.3727684484753 0.0 776.3727684484753 0.0 12.95880017344075 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 Q{I|L} 1.7811 + + 25 + 1 1.829 35033.6 1.0 4451 4400 8851 SUDHL4_400M_050219_1,8853 SUDHL4_400M_050219_1,8853,VTYDNALQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8854 47.743 131.0 645700.0 25 0 63541.0 37328 TIVTPIILRTD 11 83 621.3748778832744 1240.7352028333487 2 621.3749877810478 MULTI CID FTMS 0 0 0 8851 557990.9375 1.0 0 0.0 3 Unmodified _TIVTPIILRTD_ ENSG00000182621|ENST00000338037|PLCB1;nc|ENSG00000182621|Q9NQ66-2|PLCB1 2.735195868890462 0.8622431031272658 5 P 1 10 5.4846 0.0 0.0 0.44204 0.0 0.0 445.29344365541743 695.3505953424436 1140.6440389978611 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.44204 + + 4 + 1 1.829 67736.2 1.0 4452 4400 8851 SUDHL4_400M_050219_1,8854 SUDHL4_400M_050219_1,8854,TIVTPIILRTD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8855 47.745 74.0 738860.0 25 0 80298.0 + + 22749 QLIDIIHTA 9 92 512.2928523715258 1022.5711518098516 2 512.2956420779228 MULTI CID FTMS 0 0 0 8851 512405.28125 1.0 0 0.0 4 Unmodified _LQLNRSHR_ ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 8.593279151180031 0.7721714526254883 5 [{I|L}T][YT]TA{I|L}[Q{I|L}] 9 -1 + 28.296 0.0 0.0 2.7672 2.7672 73.425 0.0 0.0 0.0 5.988992603624865 7.147642715192507 5.988992603624865 1.2493873660830026 0 0.0 2.0 0.4247425010840047 0.0 [{I|L}T][YT]TA{I|L}[Q{I|L}];[{I|L}T][YT]T{I|L}A[Q{I|L}];[{I|L}T][YT]{I|L}TA[Q{I|L}];{NN|[MP]|[D{I|L}]|[EV]}{I|L}HTA{I|L}[Q{I|L}];{NN|[MP]|[D{I|L}]|[EV]}{I|L}HT{I|L}A[Q{I|L}];{NN|[MP]|[D{I|L}]|[EV]}{I|L}H{I|L}TA[Q{I|L}];[H{I|L}]{I|L}DTA{I|L}[Q{I|L}];[H{I|L}]{I|L}DT{I|L}A[Q{I|L}];[H{I|L}]{I|L}D{I|L}TA[Q{I|L}];[{I|L}T][HA]{NN|[MP]|[D{I|L}]|[EV]}{I|L}[Q{I|L}] 2.7672;2.645;2.5228;2.1815;2.0593;1.9371;1.813;1.6909;1.5687;1.5223 -;-;-;-;-;-;-;-;-;- 390 1 1.829 47391.3 1.0 4453 4400 8851 SUDHL4_400M_050219_1,8855 SUDHL4_400M_050219_1,8855,LQLNRSHR False False QLIDIIHTA 47.744998 512.295642077923 2887992.5 8851.0 ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 5.932157595952352 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8856 47.749 219.0 176520.0 25 0 42309.0 + 20521 LLLQLLFQWLT 11 68 694.4218577524073 1386.8291625716145 2 694.4221679568291 MULTI CID FTMS 0 0 0 8851 451362.0625 1.0 0 0.0 5 Unmodified _LLLQLLFQWLT_ REV__ENSG00000111145|ENST00000228741|ELK3 1.0714618166137932 0.8700927088084459 5 K 1 -1 3.9794 0.0 0.0 0.28694 0.0 0.0 928.556531811652 327.14475427799067 1255.7012860896427 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.28694 - 2 + 1 1.829 39669.1 1.0 4454 4400 8851 SUDHL4_400M_050219_1,8856 SUDHL4_400M_050219_1,8856,LLLQLLFQWLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8857 47.752 132.0 395940.0 25 0 48584.0 + 33522 SILEDPPSI 9 71 485.757749146479 969.500945359758 2 485.7584106326103 MULTI CID FTMS 0 0 0 8851 442681.46875 1.0 0 0.0 6 Unmodified _SILEDPPSI_ ENSG00000064102|ENST00000261191|INTS13;nc|ENSG00000064102|Q9NVM9-2|INTS13 39.957323273325 0.0756908302845263 5 PPS{I|L} 4 5 34.742 0.0 0.0 3.5835 0.0 0.0 557.2683391754593 0.0 557.2683391754593 0.0 20.445312593723983 0.0 0.0 0 0.3807196863200844 0.0 1.1549471895720984 0.0 + PPS{I|L} 3.5835 + + 172 + 1 1.829 45014.2 1.0 4455 4400 8851 SUDHL4_400M_050219_1,8857 SUDHL4_400M_050219_1,8857,SILEDPPSI True True SILEDPPSI 47.751827 485.75841063261 5870784.75 8851.0 nc|ENSG00000064102|Q9NVM9-2|INTS13;;ENSG00000064102|ENST00000261191|INTS13 3.967852830886841 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8858 47.756 210.0 292690.0 25 0 77087.0 + 28151 PPQPKHKVRRQ 11 80 685.9087252283123 0 685.9089233279228 PEAK CID FTMS 0 0 0 8851 448606.3125 1.0 0 0.0 7 Unmodified _PPQPKHKVRRQ_ REV__ENSG00000163873|ENST00000373091|GRIK3 1.1933415558491238 0.4761840153648598 5 K 1 -1 0.9691 0.0 0.0 0.070747 0.0 0.0 911.5286188142431 327.1455477350219 1238.6741665492652 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.070747 + + 1 + 1 1.829 59445.9 1.0 4456 4400 8851 SUDHL4_400M_050219_1,8858 SUDHL4_400M_050219_1,8858,PPQPKHKVRRQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8859 47.758 117.0 368720.0 25 0 76860.0 22247 LPRKRDYFL 9 51 604.3483300750685 1206.6821072169369 2 604.3488647341728 MULTI CID FTMS 0 0 0 8851 369069.1875 0.8293417624576498 -1 0.1446914672851562 8 Unmodified _LPRKRDYFL_ ENSG00000128159|ENST00000248846|TUBGCP6;ENST00000498611.5_1_22:50657979-50682900:-|nuORF;nc|ENSG00000128159|Q96RT7-2|TUBGCP6;nc|ENSG00000128159|Q96RT7-3|TUBGCP6 2.059750862983233 0.8427793054688888 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.829 39016.5 1.0 4457 4400 8851 SUDHL4_400M_050219_1,8859 SUDHL4_400M_050219_1,8859,LPRKRDYFL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8860 47.762 196.0 218990.0 25 0 50193.0 + 26853 PATRARQV 8 84 449.7656302605325 897.5167075878651 2 449.7657348513603 MULTI CID FTMS 0 0 0 8851 350004.15625 0.0025369191006255 13 -1.6486473083496094 9 Unmodified _PATRARQV_ REV__ENST00000602529.1_1_1:228463255-228463756:-|nuORF 10.183394434864962 0.7604730176254005 5 V 1 -1 13.495 0.0 0.0 1.5036 0.0 0.0 780.4371920622776 0.0 780.4371920622776 0.0 2.8989179830840506 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.5036 + + 21 + 1 1.829 39472.7 1.0 4458 4400 8851 SUDHL4_400M_050219_1,8860 SUDHL4_400M_050219_1,8860,PATRARQV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8861 47.765 154.0 308760.0 25 0 21720.0 + 30865 RIMGNIWDA 9 75 538.2705009094951 1074.5264488857902 2 538.2718383669853 MULTI CID FTMS 0 0 0 8851 277110.03125 1.0 0 0.0 10 Unmodified _RIMGNIWDA_ ENSG00000113569|ENST00000231498|NUP155;nc|ENSG00000113569|O75694-2|NUP155 19.256988751693697 0.3154191944385105 5 Y[WH]{I|L}GEW 7 8 42.791 0.0 0.0 3.9823 0.0 0.0 85.0898686139664 0.0 85.0898686139664 0.0 31.008492482573384 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 Y[WH]{I|L}GEW 3.9823 - 86 1 1.829 39873.4 1.0 4459 4400 8851 SUDHL4_400M_050219_1,8861 SUDHL4_400M_050219_1,8861,RIMGNIWDA False True RIMGNIWDA 47.765091 538.271838366985 1889438.75 8851.0 nc|ENSG00000113569|O75694-2|NUP155;;ENSG00000113569|ENST00000231498|NUP155 4.878727753957112 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8862 47.779 800.0 97159.0 25 0 29144.0 5417 DLLKRNLQLRI 11 101 691.4353106449357 1380.8560683566714 2 691.4354736208916 MULTI CID FTMS 0 0 0 8851 275842.1875 0.8487846118237992 3 -0.377532958984375 11 Unmodified _DLLKRNLQLRI_ ENST00000548939.1_1_12:70732225-70736007:+|nuORF 1.1933415558491238 0.8695176722560516 5 {I|L} 1 10 9.464 0.0 0.0 0.68537 0.0 0.0 1249.761233006865 0.0 1249.761233006865 0.0 7.474250108400469 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.68537 + + 53 + 1 1.829 63197.6 0.9800000190734864 4460 4400 8851 SUDHL4_400M_050219_1,8862 SUDHL4_400M_050219_1,8862,DLLKRNLQLRI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8863 47.793 800.0 140990.0 25 0 28386.0 31600 RQTPQKVRLVV 11 129 662.4140153304221 1322.813477727644 2 662.4142333865166 MULTI CID FTMS 0 0 0 8851 237296.828125 1.0 0 0.0 12 Unmodified _RQTPQKVRLVV_ ENSG00000132849|ENST00000642238|PATJ;ENST00000459752.5_1_1:62228564-62579919:+|nuORF;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35-3|PATJ;nc|ENSG00000132849|Q8NI35-4|PATJ;nc|ENSG00000132849|Q8NI35-5|PATJ;nc|ENSG00000132849|Q8NI35|PATJ 4.897010918128616 0.8520435188433833 5 {[CP]|[EA]}V{M(Oxidation (M))|F}V 5 8 16.409 0.0 0.0 1.2404 0.0 0.0 0.0 774.5052861595378 774.5052861595378 5.812722375747143 0.0 0.0 0.0 0 0.0 0.3565473235138126 0.0 0.0 {[CP]|[EA]}V{M(Oxidation (M))|F}V 1.2404 - 362 1 1.829 90171.6 0.8999999761581421 4461 4400 8851 SUDHL4_400M_050219_1,8863 SUDHL4_400M_050219_1,8863,RQTPQKVRLVV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8864 47.798 290.0 153910.0 25 0 12172.0 + 16248 IVQTPFDL 8 84 466.7585944171954 931.5026359011908 2 466.7583190798759 MULTI CID FTMS 0 0 0 8851 225148.75 1.0 0 0.0 13 Unmodified _IVQTPFDL_ REV__ENSG00000106462|ENST00000320356|EZH2;REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF;REV__ENST00000498186.5_1_7:148514900-148581332:-|nuORF;REV__nc|ENSG00000106462|Q15910-4|EZH2;REV__nc|ENSG00000106462|Q15910-5|EZH2;REV__nc|ENSG00000106462|Q15910|EZH2 15.768221252438446 0.6779680726941459 5 V 1 -1 13.099 0.0 0.0 1.4062 0.0 0.0 814.4231203756034 0.0 814.4231203756034 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.4062 + + 33 + 1 1.829 41020.4 1.0 4462 4400 8851 SUDHL4_400M_050219_1,8864 SUDHL4_400M_050219_1,8864,IVQTPFDL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8865 47.812 800.0 151300.0 25 0 17539.0 + 20505 LLLIMKLLF 9 129 552.3666709286422 1102.7187889240845 2 552.3667480349541 MULTI CID FTMS 0 0 0 8851 179945.828125 0.3754877756932802 3 -0.377532958984375 14 Unmodified _LLLIMKLLF_ REV__ENST00000494618.1_1_2:232324866-232324929:-|nuORF 0.6014990680409731 0.8936861360942873 5 {M(Oxidation (M))|F} 1 -1 10.485 0.0 0.0 0.95079 0.0 0.0 937.6394870215436 0.0 937.6394870215436 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.95079 + + 24 + 1 1.829 95864.6 0.7400000095367432 4463 4400 8851 SUDHL4_400M_050219_1,8865 SUDHL4_400M_050219_1,8865,LLLIMKLLF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8866 47.818 227.0 291100.0 25 0 60544.0 244 AAWARLKFPHL 11 73 655.3822954869948 1308.7500380407896 2 655.3820068240166 MULTI CID FTMS 0 0 0 8851 165956.359375 0.1048176514340306 -4 0.5260734558105469 15 Unmodified _AAWARLKFPHL_ ENSG00000112812|ENST00000230582|PRSS16 1.4819007175156935 0.86815623132643 5 A 1 10 3.4949 0.0 0.0 0.26704 0.0 0.0 909.5567529839522 325.12946497135005 1234.6862179553025 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.26704 + + 3 + 1 1.829 65097.0 1.0 4464 4400 8851 SUDHL4_400M_050219_1,8866 SUDHL4_400M_050219_1,8866,AAWARLKFPHL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8867 47.832 800.0 82536.0 25 0 8515.7 + 25537 NERRRLKRTKL 11 109 735.4620072377261 1468.909461542252 2 735.4630004763603 MULTI CID FTMS 0 0 0 8851 143632.828125 1.0 0 0.0 16 Unmodified _NERRRLKRTKL_ REV__ENST00000476910.6_1_X:101855867-101856403:+|nuORF;REV__ENST00000604957.1_2_X:101855873-101855999:+|nuORF 1.1933415558491238 0.8695176722560516 5 {I|L}ME[DP] 5 -1 8.8706 0.0 0.0 0.60389 0.0 0.0 865.6503805869771 0.0 865.6503805869771 0.0 1.8809040643634063 0.0 0.0 0 0.0 0.0 1.0709991640913 0.0 {I|L}ME[DP] 0.60389 - 145 + 1 1.829 63381.8 0.7699999809265137 4465 4400 8851 SUDHL4_400M_050219_1,8867 SUDHL4_400M_050219_1,8867,NERRRLKRTKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8868 47.837 305.0 98381.0 25 0 21072.0 43276 WHKIRARKRC 10 62 451.9325627853228 1352.7758589561686 3 451.9327270388603 MULTI CID FTMS 0 0 0 8851 138410.203125 1.0 0 0.0 17 Unmodified _WHKIRARKRC_ ENST00000373279.5_1_10:71392915-71393320:+|nuORF 0.4007161486938917 0.7247829448918255 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.829 35106.8 1.0 4466 4400 8851 SUDHL4_400M_050219_1,8868 SUDHL4_400M_050219_1,8868,WHKIRARKRC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8869 47.843 316.0 100950.0 25 0 17894.0 + 5171 DILKSRKKEAR 11 69 672.4092426983802 1342.8039324635604 2 672.4091674685478 MULTI CID FTMS 0 0 0 8851 137464.0 0.18060574608065 -4 0.5260734558105469 18 Unmodified _DILKSRKKEAR_ REV__ENST00000464624.6_1_20:57428320-57466719:+|nuORF;REV__nc|ENSG00000087460|Q5JWF2-2|GNAS;REV__nc|ENSG00000087460|Q5JWF2-3|GNAS;REV__nc|ENSG00000087460|Q5JWF2|GNAS 4.897010918128616 0.8520435188433833 5 {NN|[MP]|[D{I|L}]|[EV]}{I|L} 3 -1 15.017 0.0 0.0 1.1183 0.0 0.0 0.0 998.5853710224072 998.5853710224072 4.638290892413403 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L} 1.1183 + + 25 1 1.829 34313.1 1.0 4467 4400 8851 SUDHL4_400M_050219_1,8869 SUDHL4_400M_050219_1,8869,DILKSRKKEAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8870 47.848 254.0 229240.0 25 0 32274.0 + 17243 KLLSKFYEL 9 91 570.8370567034316 1139.659560473663 2 570.8370849490166 MULTI CID FTMS 0 0 0 8851 113541.4140625 0.5395750999992055 -1 0.1446914672851562 19 Unmodified _KLLSKFYEL_ ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48;nc|ENSG00000090686|Q86UV5-8|USP48 49.74193281347159 0.0409357517904489 5 K{I|L}{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}{I|L}S 8 4 59.182 0.0 0.0 5.1929 0.0 0.0 0.0 125.07242761783438 125.07242761783438 17.50921254545034 0.0 0.0 0.0 0 0.805462187404089 0.0 1.2302046884880935 0.0 K{I|L}{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}{I|L}S 5.1929 - 422 + 1 1.829 47417.7 1.0 4468 4400 8851 SUDHL4_400M_050219_1,8870 SUDHL4_400M_050219_1,8870,KLLSKFYEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8871 47.861 733.0 140290.0 25 0 10940.0 + 18969 LDERLHIRTL 10 145 422.58189276270446 1264.7238488883131 3 422.5817748904228 MULTI CID FTMS 0 0 0 8851 104976.3046875 0.8927956852288494 1 -0.1298141479492187 20 Unmodified _LDERLHIRTL_ REV__ENSG00000160445|ENST00000291900|ZER1 6.723162845929126 0.6955379296933136 5 {NN|[MP]|[D{I|L}]|[EV]}E 3 -1 21.796 0.0 0.0 1.7233 0.0 0.0 0.0 904.5472796346602 904.5472796346602 8.696662315049934 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}E 1.7233 + + 39 1 1.829 87748.5 1.0 4469 4400 8851 SUDHL4_400M_050219_1,8871 SUDHL4_400M_050219_1,8871,LDERLHIRTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8873 47.866 61.0 580180.0 25 0 143790.0 + 43055 VYHYLVVLLF 10 51 633.3690143829892 1264.7234758327784 2 633.3696166872978 MULTI CID FTMS 0 0 0 8872 774824.8125 0.412313212311556 3 -0.2885971069335937 1 Unmodified _VYHYLVVLLF_ REV__ENSG00000228474|ENST00000456793|OST4 0.4583401331227399 0.7245164002484112 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.829 34606.1 1.0 4470 4401 8872 SUDHL4_400M_050219_1,8873 SUDHL4_400M_050219_1,8873,VYHYLVVLLF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8874 47.873 397.0 212470.0 25 0 50369.0 14808 ILEFLPKQRR 10 93 650.396263006795 1298.77797308039 2 650.3964721560478 MULTI CID FTMS 0 0 0 8872 264830.34375 0.3362859344174709 1 -0.1471710205078125 2 Unmodified _ILEFLPKQRR_ ENSG00000111364|ENST00000238146|DDX55;ENST00000539934.5_1_12:124093257-124102497:+|nuORF;ENST00000542286.5_1_12:124093257-124104017:+|nuORF 3.944395688203298 0.708391353636983 5 R 1 9 5.4846 0.0 0.0 0.42229 0.0 0.0 816.4787309923025 323.17165678469405 1139.6503877769965 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.42229 + + 25 + 1 1.829 80426.6 1.0 4471 4401 8872 SUDHL4_400M_050219_1,8874 SUDHL4_400M_050219_1,8874,ILEFLPKQRR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8875 47.875 80.0 775010.0 25 0 135170.0 + 37493 TLFPSKIGV 9 71 481.28950630211 960.56445967102 2 481.2898132205009 MULTI CID FTMS 0 0 0 8872 666481.0 1.0 0 0.0 3 Unmodified _TLFPSKIGV_ ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B 16.149105407346934 0.3995459350917656 5 [{I|L}T]{M(Oxidation (M))|F}PS 5 4 43.94 0.0 0.0 4.5744 0.0 0.0 0.0 412.2566927545532 412.2566927545532 14.018637558036673 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 + [{I|L}T]{M(Oxidation (M))|F}PS 4.5744 + + 111 + 1 1.829 52441.2 1.0 4472 4401 8872 SUDHL4_400M_050219_1,8875 SUDHL4_400M_050219_1,8875,TLFPSKIGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8876 47.877 97.0 511130.0 25 0 75173.0 + 1289 AIQKTWKI 8 84 494.3010030019718 986.5874530707435 2 494.3005859255791 MULTI CID FTMS 0 0 0 8872 480907.65625 0.1626463950671814 4 -0.4662399291992187 4 Unmodified _AIQKTWKI_ REV__ENST00000515337.1_2_5:158758831-158759863:+|nuORF 8.593279151180031 0.7721714526254883 5 [NS]{I|L}EV 5 -1 9.1812 0.0 0.0 0.9306 0.0 0.0 0.0 441.29293337763744 441.29293337763744 0.2287874528033739 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NS]{I|L}EV 0.9306 - 34 1 1.829 41750.2 1.0 4473 4401 8872 SUDHL4_400M_050219_1,8876 SUDHL4_400M_050219_1,8876,AIQKTWKI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8877 47.88 127.0 483590.0 25 0 70702.0 + -1 VLCRLVCLSI 10 79 588.3354084605407 1174.6562639878814 2 588.3355590701103 MULTI CID FTMS 0 0 0 8872 458130.71875 1.0 0 0.0 5 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))RLVCLSI_ REV__ENST00000447069.5_3_2:201677557-201677948:+|nuORF 1.6526216038709556 0.7189921496796233 5 A 1 -1 0.71334 0.0 0.0 0.060727 0.0 0.0 775.4629178958877 325.1290377252563 1100.591955621144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.060727 - 5 + 1 1.829 50715.7 1.0 4474 4401 8872 SUDHL4_400M_050219_1,8877 SUDHL4_400M_050219_1,8877,VLCRLVCLSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8878 47.883 134.0 323730.0 25 0 66882.0 + 30187 QVVEPVRIFVP 11 65 641.8826659836689 0 641.8826782107353 PEAK CID FTMS 0 0 0 8872 453605.125 0.3658863438054613 4 -0.4662399291992187 6 Unmodified _QVVEPVRIFVP_ REV__ENST00000510666.1_1_5:68840710-68849495:+|nuORF 1.3295316138638542 0.4761840153648598 5 K 1 -1 3.0989 0.0 0.0 0.24177 0.0 0.0 823.4789417312064 327.14545618228755 1150.624397913494 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.24177 - 4 + 1 1.829 38791.2 1.0 4475 4401 8872 SUDHL4_400M_050219_1,8878 SUDHL4_400M_050219_1,8878,QVVEPVRIFVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8879 47.886 143.0 269350.0 25 0 76711.0 30218 QWGRKAKRPLN 11 67 677.3952702999136 1352.775987666627 2 677.3957397341728 MULTI CID FTMS 0 0 0 8872 407998.71875 0.8215558791896272 1 -0.1471710205078125 7 Unmodified _QWGRKAKRPLN_ ENST00000360472.8_1_1:160183673-160183802:+|nuORF 1.3295316138638542 0.8688751186870782 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.829 42617.0 1.0 4476 4401 8872 SUDHL4_400M_050219_1,8879 SUDHL4_400M_050219_1,8879,QWGRKAKRPLN False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8880 47.89 237.0 345670.0 25 0 71401.0 + -1 VLMKLKGIS 9 97 502.81417901067095 1003.613805088142 2 502.8145934939384 MULTI CID FTMS 0 0 0 8872 270838.0625 0.1055924711218568 4 -0.4662399291992187 8 Oxidation (M) _VLM(Oxidation (M))KLKGIS_ REV__ENSG00000033122|ENST00000651989|LRRC7;REV__ENST00000415775.2_1_1:70225872-70503822:+|nuORF;REV__nc|ENSG00000033122|Q96NW7-2|LRRC7;REV__nc|ENSG00000033122|Q96NW7|LRRC7 4.75600775471527 0.7486543447549536 5 {I|L} 1 -1 10.278 0.0 0.0 1.0241 0.0 0.0 872.5187713740779 0.0 872.5187713740779 0.0 0.3627533357430579 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0241 + + 16 + 1 1.829 67239.6 1.0 4477 4401 8872 SUDHL4_400M_050219_1,8880 SUDHL4_400M_050219_1,8880,VLMKLKGIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8881 47.898 442.0 246880.0 25 0 54883.0 -1 MLRRRFRV 8 105 575.3452642213675 1148.675975509535 2 575.3461791872978 MULTI CID FTMS 0 0 0 8872 258679.796875 1.0 0 0.0 9 Oxidation (M) _M(Oxidation (M))LRRRFRV_ ENST00000589096.1_1_19:13869843-13870239:+|nuORF 2.577480529830294 0.808687252328423 5 D 1 -1 5.9033 0.0 0.0 0.51392 0.0 0.0 945.5959869614866 85.03018366031483 1030.6261706218015 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1923877696554315 0.0 D 0.51392 - 13 + 1 1.829 84934.9 1.0 4478 4401 8872 SUDHL4_400M_050219_1,8881 SUDHL4_400M_050219_1,8881,MLRRRFRV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8882 47.905 408.0 403860.0 25 0 38769.0 + + 19611 GLAPLEVRV 9 137 477.2925934268543 952.5706339205086 2 477.2928039431572 MULTI CID FTMS 0 0 0 8872 225120.6875 0.8676521484106239 -1 0.1298141479492187 10 Unmodified _LGAVDLRPL_ nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-2|FLNB;ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-9|FLNB;nc|ENSG00000136068|O75369-8|FLNB 32.30548876998284 0.1201446275138228 5 {[VA]|[{I|L}G]}AP{I|L}EVRV 9 -1 + 69.218 0.0 0.0 7.2664 7.2664 91.262 0.0 0.0 0.0 45.572520036465846 7.61925660497343 7.61925660497343 8.450980400142562 0 0.9247425010840048 2.0 0.0 0.2302046884880938 {[VA]|[{I|L}G]}AP{I|L}EVRV;{[VA]|[{I|L}G]}AP{I|L}VERV;{[VA]|[{I|L}G]}AP{I|L}VRD{I|L};{[VA]|[{I|L}G]}AP{I|L}VREV;{[VA]|[{I|L}G]}AP{I|L}[W{I|L}]A{I|L};{[VA]|[{I|L}G]}AV[{I|L}P]ERV;{[VA]|[{I|L}G]}AV[{I|L}P]RD{I|L};{[VA]|[{I|L}G]}AV[{I|L}P]REV;{[VA]|[{I|L}G]}VA[{I|L}P]ERV;{[VA]|[{I|L}G]}VA[{I|L}P]RD{I|L} 7.2664;6.3792;6.1516;5.5055;5.426;4.8105;4.5828;3.9368;3.7847;3.5571 -;-;-;-;-;-;-;-;-;- 313 + 1 1.829 130526.4 1.0 4479 4401 8872 SUDHL4_400M_050219_1,8882 SUDHL4_400M_050219_1,8882,LGAVDLRPL False False GLAPLEVRV 47.905112 477.292803943157 1919393.375 8872.0 nc|ENSG00000136068|O75369-5|FLNB;;nc|ENSG00000136068|O75369-3|FLNB;;nc|ENSG00000136068|O75369-4|FLNB;;nc|ENSG00000136068|O75369-7|FLNB;;nc|ENSG00000136068|O75369-2|FLNB;;ENSG00000136068|ENST00000295956|FLNB;;nc|ENSG00000136068|O75369-6|FLNB;;nc|ENSG00000136068|O75369-9|FLNB;;nc|ENSG00000136068|O75369-8|FLNB 4.960764169692993 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8883 47.912 358.0 175680.0 25 0 24773.0 + 1358 ALAAALAHI 9 85 425.7609459207552 849.5073389083103 2 425.7608520388603 MULTI CID FTMS 0 0 0 8872 173976.125 1.0 0 0.0 11 Unmodified _ALAAALAHI_ ENSG00000107625|ENST00000373585|DDX50;ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21 67.41302359171755 0.0220989861905124 5 [{I|L}A]AAA{I|L}A[H{I|L}] 9 0 + 71.661 0.0 0.0 8.4355 8.4355 97.624 0.0 0.0 0.0 58.359790849763655 7.147642715192504 7.147642715192504 23.49993446776488 0 1.579689690656103 2.0 0.0 0.0 + + [{I|L}A]AAA{I|L}A[H{I|L}];[{I|L}A]A[RV]A[H{I|L}];[{I|L}A]{[NV]|[RG]}{I|L}A[H{I|L}] 8.4355;5.6692;4.8201 +;-;- + 192 + 1 1.829 56259.5 1.0 4480 4401 8872 SUDHL4_400M_050219_1,8883 SUDHL4_400M_050219_1,8883,ALAAALAHI True True ALAAALAHI 47.911561 425.76085203886 873025.0625 8872.0 ENSG00000107625|ENST00000373585|DDX50;;nc|ENSG00000165732|Q9NR30-2|DDX21;;ENSG00000165732|ENST00000354185|DDX21 6.082173188527425 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8884 47.925 800.0 159600.0 25 0 31394.0 + 2214 AQARRPRRR 9 134 583.8587842871791 1165.703015641158 2 583.8593627810478 MULTI CID FTMS 0 0 0 8872 163770.09375 1.0 0 0.0 12 Unmodified _AQARRPRRR_ REV__ENST00000505521.1_1_5:177019227-177019656:+|nuORF 4.3292370932331545 0.7635526921153418 5 Y 1 -1 11.42 0.0 0.0 0.97966 0.0 0.0 984.6285202571722 0.0 984.6285202571722 0.0 1.6660733951769124 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.97966 - 71 + 1 1.829 96230.3 0.6800000071525574 4481 4401 8872 SUDHL4_400M_050219_1,8884 SUDHL4_400M_050219_1,8884,AQARRPRRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8885 47.939 800.0 221830.0 25 0 56844.0 25732 NILLRLLREEE 11 134 699.4085730626555 1396.8025931921109 2 699.4094116091728 MULTI CID FTMS 0 0 0 8872 130713.8984375 0.3920007465440707 -5 0.6558876037597656 13 Unmodified _NILLRLLREEE_ ENSG00000056972|ENST00000368761|TRAF3IP2;nc|ENSG00000056972|O43734-3|TRAF3IP2;nc|ENSG00000056972|O43734-4|TRAF3IP2;nc|ENSG00000056972|O43734-5|TRAF3IP2;nc|ENSG00000056972|O43734|TRAF3IP2 2.735195868890462 0.8622431031272658 5 {I|L} 1 10 8.6292 0.0 0.0 0.61778 0.0 0.0 1265.7077273247264 0.0 1265.7077273247264 0.0 5.530266962239633 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.61778 + + 85 + 1 1.829 140275.1 0.6399999856948853 4482 4401 8872 SUDHL4_400M_050219_1,8885 SUDHL4_400M_050219_1,8885,NILLRLLREEE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8886 47.946 291.0 240440.0 25 0 17258.0 + -1 QLMEQVAQL 9 124 530.2775629925827 529.2702865259827 1 530.2781860232353 MULTI CID FTMS 0 0 0 8872 123710.53125 1.0 0 0.0 14 nc|ENSG00000204843|Q14203-3|DCTN1;ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1 5 [{I|L}T]A[EP] 5 -1 + 19.99 0.0 0.0 3.777 3.777 76.531 0.0 0.0 0.0 2.0855217439603244 0.5360498482393403 0.5360498482393403 2.0855217439603244 0 0.0 1.6989700043360187 0.3054621874040891 0.0 [{I|L}T]A[EP];{[QN]|[E{I|L}]|[KN]}A[TP];[{I|L}A]E[TP];[{I|L}A]T[EP] 3.777;3.3829;0.61206;0.42896 -;-;-;- 85 1 1.829 59445.2 1.0 4483 4401 8872 SUDHL4_400M_050219_1,8886 SUDHL4_400M_050219_1,8886, False False QLMEQVAQL 47.946043 530.278186023235 792281.6875 8872.0 nc|ENSG00000204843|Q14203-3|DCTN1;;ENSG00000204843|ENST00000628224|DCTN1;;nc|ENSG00000204843|Q14203-4|DCTN1;;nc|ENSG00000204843|Q14203-2|DCTN1;;nc|ENSG00000204843|Q14203-6|DCTN1;;nc|ENSG00000204843|Q14203-5|DCTN1 0.3598420619964599 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8887 47.949 173.0 390730.0 25 0 36030.0 23033 LSKPADWNL 9 110 522.2784756611428 1042.5423983890855 2 522.2780029177666 MULTI CID FTMS 0 0 0 8872 105824.9375 0.4155284843447244 -1 0.1298141479492187 15 Unmodified _LSKPADWNL_ ENST00000569860.1_1_2:12856079-12856172:+|nuORF 43.85829265575387 0.0542763391141878 5 S[PG]{[RE]|[WV]}WN{I|L} 8 4 27.471 0.0 0.0 2.635 0.0 0.0 85.08979994941562 0.0 85.08979994941562 0.0 7.305906063131715 0.0 0.0 0 0.3252574989159953 0.0 0.3807196863200844 0.8807196863200843 S[PG]{[RE]|[WV]}WN{I|L} 2.635 - 262 1 1.829 54997.7 1.0 4484 4401 8872 SUDHL4_400M_050219_1,8887 SUDHL4_400M_050219_1,8887,LSKPADWNL True True KLPDGTWNL 47.949415 522.2806 2095305.875 8872.0 nc|ENSG00000157540|Q13627-5|DYRK1A;;ENSG00000157540|ENST00000647188|DYRK1A;;nc|ENSG00000157540|Q13627|DYRK1A;;nc|ENSG00000157540|Q13627-3|DYRK1A;;nc|ENSG00000157540|Q13627-4|DYRK1A 3.203296939531962 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8888 47.959 566.0 240820.0 25 0 24310.0 + -1 TLMAEMHVV 9 159 515.340727412562 514.333450945962 1 515.7570068240166 MULTI CID FTMS 0 0 0 8872 43345.98828125 1.0 0 0.0 16 nc|ENSG00000171634|Q12830|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF 5 {I|L} 1 -1 12.764 0.0 0.0 2.4817 0.0 0.0 383.23844774947605 0.0 383.23844774947605 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.4817 - 72 + 1 1.829 106229.7 1.0 4485 4401 8872 SUDHL4_400M_050219_1,8888 SUDHL4_400M_050219_1,8888, False False TLMAEMHVV 47.959347 515.757006824017 355845.21875 8872.0 nc|ENSG00000171634|Q12830|BPTF;;ENSG00000171634|ENST00000306378|BPTF;;nc|ENSG00000171634|Q12830-4|BPTF 2.174567401409149 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8889 47.966 364.0 305170.0 25 0 24493.0 + 34502 SMTLAIHEI 9 127 507.7689477698525 1013.523342606505 2 507.7691528201103 MULTI CID FTMS 0 0 0 8872 84294.4296875 0.6217998995640128 -1 0.1298141479492187 17 Unmodified _SMTLAIHEI_ ENSG00000143753|ENST00000323699|DEGS1 81.61307344734483 0.0171259190214613 5 {[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A{I|L}{I|L}{[YC]|[HE]} 9 2 + 70.319 0.0 0.0 6.9381 6.9381 95.345 0.0 0.0 0.0 17.421276860725627 14.934239665113722 14.934239665113722 23.08758607128631 0 1.0941876774005248 1.6989700043360187 1.555462187404089 0.0 {[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A{I|L}{I|L}{[YC]|[HE]};[VP][NS]{I|L}A{I|L}T{[CP]|[EA]};[{I|L}T]A[QP]A{I|L}T{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[QP]APV;{[QN]|[E{I|L}]|[KN]}HA{I|L}TA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}HA{I|L}T{I|L}{[MS]|[{M(Oxidation (M))|F}A]};{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}A[QP][PG]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}T{I|L}[R{M(Oxidation (M))|F}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YC]|[HE]}{I|L}A{I|L}TA{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}HAER{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 6.9381;4.6601;4.5468;4.4978;4.4361;4.0435;4.0391;3.7843;3.5728;3.3062 -;-;-;-;-;-;-;-;-;- 741 + 1 1.829 88009.1 1.0 4486 4401 8872 SUDHL4_400M_050219_1,8889 SUDHL4_400M_050219_1,8889,SMTLAIHEI True True SMTLAIHEI 47.965886 507.76915282011 929085.75 8872.0 ENSG00000143753|ENST00000323699|DEGS1 5.243894100189209 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8890 47.98 800.0 192050.0 25 0 10193.0 30127 QVLDTYMF 8 119 1016.4796972907844 1015.4724208241844 1 1016.479479968548 MULTI CID FTMS 0 0 0 8872 262290.53125 1.0 0 0.0 18 Unmodified _QVLDTYMF_ DENND3|p.K1131Rfs*22|1|0.3|ENSG00000105339|chr8:141192654-141192655|-/AA|frameshift_variant;ENSG00000105339|ENST00000519811|DENND3;ENST00000520482.1_1_8:142168222-142185717:+|nuORF;nc|ENSG00000105339|A2RUS2-2|DENND3;nc|ENSG00000105339|A2RUS2|DENND3 16.942295170755138 0.6606234159769251 5 [NP]{I|L}[DV]TV{M(Oxidation (M))|F} 8 5 26.947 0.0 0.0 2.6537 0.0 0.0 0.0 127.00663648264072 127.00663648264072 6.769856214892371 0.0 0.0 0.0 0 0.0 0.0 1.0044321917401078 0.7059771852360797 [NP]{I|L}[DV]TV{M(Oxidation (M))|F} 2.6537 - 366 1 1.829 108501.1 0.7599999904632568 4487 4401 8872 SUDHL4_400M_050219_1,8890 SUDHL4_400M_050219_1,8890,QVLDTYMF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8891 47.995 800.0 124740.0 25 0 7891.8 + -1 SMNGGVFAV 9 118 881.4140307134802 1760.8135084937603 2 881.4146606326103 MULTI CID FTMS 0 0 0 8872 205025.765625 0.2802938417611998 6 -0.7252273559570312 19 ENST00000509248.1_1_4:139101937-139104441:-|nuORF;ENSG00000151012|ENST00000280612|SLC7A11 5 {NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}V{M(Oxidation (M))|F}SQNA{M(Oxidation (M))|F}Y 12 -1 64.24 0.0 0.0 3.6483 0.0 0.0 0.0 355.2093396887839 355.2093396887839 28.305388235033035 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.3494850021680094 1.4916440611282626 {NN|[MP]|[D{I|L}]|[EV]}{[MS]|[{M(Oxidation (M))|F}A]}V{M(Oxidation (M))|F}SQNA{M(Oxidation (M))|F}Y 3.6483 - 6760 1 1.829 68019.0 0.6800000071525574 4488 4401 8872 SUDHL4_400M_050219_1,8891 SUDHL4_400M_050219_1,8891, False False SMNGGVFAV 47.994774 881.41466063261 580836.0625 8872.0 ENST00000509248.1_1_4:139101937-139104441:-|nuORF;;ENSG00000151012|ENST00000280612|SLC7A11 4.521303494771321 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8892 48.009 800.0 69880.0 25 0 5170.1 -1 0 86 1010.9732099739704 2019.9318670147409 2 1011.474047839642 MULTI CID FTMS 0 0 0 8872 174014.21875 1.0 0 0.0 20 5 QN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 7 -1 33.288 0.0 0.0 1.648 0.0 0.0 1192.5874500959 0.0 1192.5874500959 0.0 14.079853937541742 0.0 0.0 0 1.305462187404089 0.0 0.0 0.4247425010840047 QN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 1.648 - 420 1 1.829 44110.9 0.699999988079071 4489 4401 8872 SUDHL4_400M_050219_1,8892 SUDHL4_400M_050219_1,8892, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8894 48.015 157.0 216470.0 25 0 26463.0 + 34020 TLTNVIHNL 9 70 512.2928523715258 1022.5711518098516 2 512.7946655154228 MULTI CID FTMS 0 0 0 8893 157293.015625 0.3449457643684726 1 -0.1005477905273437 1 Unmodified _SLIYRRCL_ ENSG00000123353|ENST00000243045|ORMDL2 10.183394434864962 0.7604730176254005 5 {[NV]|[RG]}TNV{I|L}W 7 8 26.471 0.0 0.0 2.5886 0.0 0.0 0.0 193.09852014713127 193.09852014713127 5.471835457293963 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[NV]|[RG]}TNV{I|L}W 2.5886 - 72 + 1 1.829 30508.2 1.0 4490 4402 8893 SUDHL4_400M_050219_1,8894 SUDHL4_400M_050219_1,8894,SLIYRRCL False False TLTNVIHNL 48.015134 512.794665515423 3231009.75 8893.0 ENSG00000123353|ENST00000243045|ORMDL2 6.010905583699544 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8895 48.018 166.0 284660.0 25 0 23319.0 43420 WRLRQGRRP 9 73 612.8614908470721 1223.708428760944 2 612.8620483279228 MULTI CID FTMS 0 0 0 8893 214615.546875 0.5075752363030133 2 -0.1414260864257812 2 Unmodified _WRLRQGRRP_ ENST00000587173.5_1_17:41170727-41174193:-|nuORF 7.289230182591677 0.6602208344931196 5 M 1 9 7.4743 0.0 0.0 0.61079 0.0 0.0 481.3088448759816 608.3464449518186 1089.6552898278003 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 M 0.61079 - 9 + 1 1.829 40413.2 1.0 4491 4402 8893 SUDHL4_400M_050219_1,8895 SUDHL4_400M_050219_1,8895,WRLRQGRRP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8896 48.02 47.0 762990.0 25 0 109720.0 + 9668 FLQEGDLISA 10 69 546.7822267934887 1091.5499006537773 2 546.7823974490166 MULTI CID FTMS 0 0 0 8893 650184.3125 0.2640295476983911 -2 0.2769851684570312 3 Unmodified _FLQEGDLISA_ ENSG00000130713|ENST00000372358|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2 17.11289562659939 0.5604042439455784 5 {[TV]|[{I|L}S]}{I|L}RY 5 8 26.031 0.0 0.0 2.3848 0.0 0.0 0.0 456.1751197302023 456.1751197302023 13.199849938126889 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}{I|L}RY 2.3848 - 117 1 1.829 35204.4 1.0 4492 4402 8893 SUDHL4_400M_050219_1,8896 SUDHL4_400M_050219_1,8896,FLQEGDLISA False True FLQEGDLISA 48.019694 546.782397449017 32091182.0 8893.0 ENSG00000130713|ENST00000372358|EXOSC2;;nc|ENSG00000130713|Q13868-3|EXOSC2 6.302533785502116 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8897 48.022 103.0 246330.0 25 0 42913.0 -1 TLKPEGSRIPR 11 42 648.374464817093 1294.734376700986 2 648.3749267458916 MULTI CID FTMS 0 0 0 8893 454664.21875 0.8581258892084466 -2 0.2769851684570312 4 Acetyl (Protein N-term) _(Acetyl (Protein N-term))TLKPEGSRIPR_ chr7:74223910-74224018|12|37.25|0.91|5.36|+|1|None,LAT2|1 0.9622753412299312 0.8706078577147922 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.829 31177.9 1.0 4493 4402 8893 SUDHL4_400M_050219_1,8897 SUDHL4_400M_050219_1,8897,TLKPEGSRIPR False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_1 8898 48.026 214.0 450150.0 25 0 32301.0 + 16704 KESSTVFEL 9 123 520.2694253199168 1038.5242977066334 2 520.2692138552666 MULTI CID FTMS 0 0 0 8893 284441.28125 1.0 0 0.0 5 Unmodified _KESSTVFEL_ ENSG00000103363|ENST00000409906|ELOB;nc|ENSG00000103363|Q15370-2|ELOB 55.23464941255904 0.0288927259679799 5 [{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}V{M(Oxidation (M))|F}E{I|L} 8 5 + 54.302 0.0 0.0 5.2288 5.2288 78.775 0.0 0.0 0.0 0.6246936830414995 7.354771935914002 0.6246936830414995 0.6246936830414995 0 0.9559771852360796 0.0 1.5356668758921828 0.0 [{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}V{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}E{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}M{[SA]|[TG]}V{M(Oxidation (M))|F}E{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[WQ]V{M(Oxidation (M))|F}E{I|L};[{M(Oxidation (M))|F}E]{I|L}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}NEK{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}VE{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}N[WH]VE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}M{[SA]|[TG]}VE{M(Oxidation (M))|F}{I|L} 5.2288;5.1686;5.0036;4.676;4.5176;4.3199;4.2167;4.1566;4.1357;3.9915 -;-;-;-;-;-;-;-;-;- 458 1 1.829 76833.0 1.0 4494 4402 8893 SUDHL4_400M_050219_1,8898 SUDHL4_400M_050219_1,8898,KESSTVFEL True True KESSTVFEL 48.025982 520.269213855267 1702865.75 8893.0 nc|ENSG00000103363|Q15370-2|ELOB;;ENSG00000103363|ENST00000409906|ELOB 2.7046276728312173 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8899 48.029 172.0 287200.0 25 0 72423.0 37449 TLDRGFLL 8 87 467.772151923907 933.529750914614 2 467.7713806033134 MULTI CID FTMS 0 0 0 8893 207934.625 1.0 0 0.0 6 Unmodified _TLDRGFLL_ ENST00000358901.10_1_9:35056923-35057088:-|nuORF 30.22481116460888 0.4082965392918993 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}A[PS]{I|L}{I|L} 9 7 + 53.082 0.0 0.0 5.6862 5.6862 90.065 0.0 0.0 0.0 4.137342758552691 37.59758745913771 4.137342758552691 9.407818218340369 0 0.5 0.0 1.6989700043360187 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L}A[PS]{I|L}{I|L};[{I|L}T][YG]A[PS]{I|L}{I|L};[{I|L}T][PG]H[PS]{I|L}{I|L};[{I|L}T][YQ][PS]{I|L}{I|L};[R{M(Oxidation (M))|F}]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L};[{I|L}T]{[DS]|[MA]|[CV]|TT}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L}{I|L};[{I|L}A][PS]H[PS]{I|L}{I|L} 5.6862;4.6784;4.4121;4.0406;3.4518;3.2631;2.7676 -;-;-;-;-;-;- 262 1 1.829 43244.0 1.0 4495 4402 8893 SUDHL4_400M_050219_1,8899 SUDHL4_400M_050219_1,8899,TLDRGFLL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8900 48.033 167.0 309280.0 25 0 35077.0 + 9326 FIINGIEKV 9 81 516.8077042199743 1031.6008555067483 2 516.8083984255791 MULTI CID FTMS 0 0 0 8893 181920.453125 1.0 0 0.0 7 Unmodified _FIINGIEKV_ ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B;nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B 27.628801355627647 0.1796483985696185 5 E{[VA]|[{I|L}G]}N{I|L}{[QN]|[E{I|L}]|[KN]} 7 5 25.718 0.0 0.0 2.493 0.0 0.0 245.17437941718907 0.0 245.17437941718907 0.0 11.95046257204389 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.4247425010840047 E{[VA]|[{I|L}G]}N{I|L}{[QN]|[E{I|L}]|[KN]} 2.493 - 68 1 1.829 47006.1 1.0 4496 4402 8893 SUDHL4_400M_050219_1,8900 SUDHL4_400M_050219_1,8900,FIINGIEKV False True FIINGIEKV 48.032623 516.808398425579 480487.4375 8893.0 nc|ENSG00000125630|Q9H9Y6-3|POLR1B;;nc|ENSG00000125630|Q9H9Y6-5|POLR1B;;ENSG00000125630|ENST00000263331|POLR1B;;nc|ENSG00000125630|Q9H9Y6-2|POLR1B 3.292424837748209 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8901 48.036 174.0 303820.0 25 0 27825.0 + 3204 AWAAARKRRR 10 79 621.3748778832744 1240.7352028333487 2 621.3751098513603 MULTI CID FTMS 0 0 0 8893 177655.390625 0.3183840071327323 2 -0.1414260864257812 8 Unmodified _AWAAARKRRR_ REV__ENST00000374694.2_1_10:35930658-35931186:-|nuORF 1.844237919475145 0.7181058121064529 5 A 1 -1 1.5938 0.0 0.0 0.12846 0.0 0.0 841.542833303855 325.1302889459594 1166.6731222498145 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.12846 + + 4 + 1 1.829 43034.3 1.0 4497 4402 8893 SUDHL4_400M_050219_1,8901 SUDHL4_400M_050219_1,8901,AWAAARKRRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8902 48.041 294.0 304500.0 25 0 23641.0 + 31273 RLWPKIQGL 9 107 555.8426708728567 1109.6707888125134 2 555.8429443240166 MULTI CID FTMS 0 0 0 8893 171226.671875 0.119351529253865 -3 0.4216766357421875 9 Unmodified _RLWPKIQGL_ ENSG00000168209|ENST00000307365|DDIT4 58.6788170122104 0.0268135626297836 5 [Q{I|L}][{I|L}T]PK{I|L}Q 8 5 44.11 0.0 0.0 3.975 0.0 0.0 0.0 185.0922001378821 185.0922001378821 23.93250260310865 0.0 0.0 0.0 0 1.339136830878453 0.0 0.8494850021680094 0.3807196863200844 [Q{I|L}][{I|L}T]PK{I|L}Q 3.975 - 457 1 1.829 73379.1 1.0 4498 4402 8893 SUDHL4_400M_050219_1,8902 SUDHL4_400M_050219_1,8902,RLWPKIQGL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8903 48.045 188.0 257820.0 25 0 49155.0 + 10484 FTQDSNYLL 9 83 550.7663469937785 1099.5181410543569 2 550.7667724490166 MULTI CID FTMS 0 0 0 8893 158623.703125 0.6718440954235542 -2 0.2769851684570312 10 Unmodified _FTQDSNYLL_ ENSG00000023734|ENST00000419869|STRAP;nc|ENSG00000023734|Q9Y3F4-2|STRAP 30.63653989081413 0.1413794767160703 5 [{I|L}A][C(Carbamidomethyl (C)){M(Oxidation (M))|F}][NS]Y 7 6 23.758 0.0 0.0 2.1608 0.0 0.0 0.0 241.15117263078187 241.15117263078187 8.809378477754066 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.4247425010840047 0.3807196863200844 [{I|L}A][C(Carbamidomethyl (C)){M(Oxidation (M))|F}][NS]Y 2.1608 - 75 1 1.829 40675.0 1.0 4499 4402 8893 SUDHL4_400M_050219_1,8903 SUDHL4_400M_050219_1,8903,FTQDSNYLL False True FTQDSNYLL 48.04504 550.766772449017 1917495.625 8893.0 nc|ENSG00000023734|Q9Y3F4-2|STRAP;;ENSG00000023734|ENST00000419869|STRAP 2.032109062497814 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8904 48.048 167.0 408220.0 25 0 38660.0 + 33577 SINDKIIEL 9 98 522.8012271888049 1043.5879014444097 2 522.8013183474541 MULTI CID FTMS 0 0 0 8893 119327.7265625 1.0 0 0.0 11 Unmodified _SINDKIIEL_ ENSG00000072310|ENST00000261646|SREBF1;ENSG00000198911|ENST00000361204|SREBF2;ENST00000470247.1_1_17:17721556-17722545:-|nuORF;nc|ENSG00000072310|P36956-2|SREBF1;nc|ENSG00000072310|P36956-3|SREBF1;nc|ENSG00000072310|P36956-4|SREBF1;nc|ENSG00000072310|P36956-5|SREBF1;nc|ENSG00000072310|P36956-6|SREBF1;nc|ENSG00000198911|Q12772-2|SREBF2 26.268140514670165 0.1969607489560049 5 {[TV]|[{I|L}S]}NR{I|L}S{I|L}E{I|L} 9 3 + 61.225 0.0 0.0 5.8668 5.8668 89.572 0.0 0.0 0.0 20.737862141609185 46.04786736677495 20.737862141609185 9.208187539523747 0 1.0317183090963749 2.0 0.5044321917401079 0.0 {[TV]|[{I|L}S]}NR{I|L}S{I|L}E{I|L};{[TV]|[{I|L}S]}GGR{I|L}S{I|L}E{I|L};{[TV]|[{I|L}S]}N[VG]{I|L}S{I|L}E{I|L};{[TV]|[{I|L}S]}GG[VG]{I|L}S{I|L}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}S{I|L}[QP]N{I|L};[VS]QR{I|L}S{I|L}E{I|L};[K{I|L}][DN]{I|L}S{I|L}E{I|L};[VS][NG]{I|L}{I|L}S{I|L}E{I|L};[VP]HH{I|L}S{I|L}E{I|L};[VS][AG]R{I|L}S{I|L}E{I|L} 5.8668;4.9844;4.9844;4.1063;3.1148;2.8234;2.442;2.3223;2.1536;1.941 -;-;-;-;-;-;-;-;-;- 221 1 1.829 57544.0 1.0 4500 4402 8893 SUDHL4_400M_050219_1,8904 SUDHL4_400M_050219_1,8904,SINDKIIEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8905 48.062 800.0 189730.0 25 0 19462.0 -1 IATTIITISMI 11 131 596.8489125862759 1191.6832722393517 2 596.8488647341728 MULTI CID FTMS 0 0 0 8893 123352.53125 0.5343551917602257 2 -0.1414260864257812 12 Oxidation (M) _IATTIITISM(Oxidation (M))I_ ENSG00000174640|ENST00000310926|SLCO2A1;ENST00000462770.5_1_3:133661447-133748739:-|nuORF 3.2813086475875832 0.8596665074481906 5 {I|L} 1 -1 9.8329 0.0 0.0 0.82513 0.0 0.0 1060.5885284422798 0.0 1060.5885284422798 0.0 1.4231978973790582 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.82513 + + 40 + 1 1.829 114122.2 0.6600000262260437 4501 4402 8893 SUDHL4_400M_050219_1,8905 SUDHL4_400M_050219_1,8905,IATTIITISMI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8906 48.07 420.0 409770.0 25 0 21534.0 -1 0 135 974.9619527893966 1947.909352645593 2 974.9617797732352 MULTI CID FTMS 0 0 0 8893 116669.859375 0.2234562622372622 -2 0.2769851684570312 13 5 [Q{I|L}]S[KG]EVT[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 18 -1 + 93.172 0.0 0.0 4.7832 4.7832 79.778 0.0 0.0 0.0 2.5880924303447443 7.727562184969372 2.5880924303447443 2.5880924303447443 0 0.8494850021680094 0.0 1.3996498648046138 2.497425010840047 [Q{I|L}]S[KG]EVT[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}{I|L}[KG]EVT[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]S{[QS]|[NT]}VVT[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}{I|L}{[QS]|[NT]}VVT[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]SA[SG]VVT[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]S[KG]D{I|L}T[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}{I|L}A[SG]VVT[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}{I|L}[KG]D{I|L}T[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]SA{I|L}[QT]T[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[Q{I|L}]S[KG]EV[EC]G{M(Oxidation (M))|F}AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.7832;4.6503;4.3713;4.2384;4.2047;4.1465;4.0718;4.0136;3.9736;3.9155 -;-;-;-;-;-;-;-;-;- 47818 1 1.829 116062.1 1.0 4502 4402 8893 SUDHL4_400M_050219_1,8906 SUDHL4_400M_050219_1,8906, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8907 48.074 245.0 180140.0 25 0 17127.0 + 15112 IMVEIEGLTL 10 89 559.3146647052334 1116.6147764772668 2 559.3177978396416 MULTI CID FTMS 0 0 0 8893 115980.0390625 0.8090621950439246 -6 0.8030586242675781 14 Unmodified _IMVEIEGLTL_ REV__ENSG00000109065|ENST00000357814|NAT9;REV__ENST00000577428.5_1_17:72768529-72772472:-|nuORF;REV__ENST00000578798.5_1_17:72768345-72772472:-|nuORF;REV__ENST00000582359.5_1_17:72768918-72770027:-|nuORF;REV__ENST00000583689.5_1_17:72768918-72771837:-|nuORF;REV__ENST00000583834.5_1_17:72768345-72771837:-|nuORF;REV__ENST00000585240.5_1_17:72768620-72771837:-|nuORF;REV__nc|ENSG00000109065|Q9BTE0-2|NAT9 25.399314129420983 0.3980215340001851 5 {[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}{I|L}M{I|L}[{I|L}T] 9 -1 + 27.693 0.0 0.0 2.4801 2.4801 82.348 0.0 0.0 0.0 5.826301877189572 2.9879569474275094 2.9879569474275094 10.000000000000004 0 0.0 1.154901959985743 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}{I|L}M{I|L}[{I|L}T];[{I|L}T]{NN|[MP]|[D{I|L}]|[EV]}[TP]M{I|L}[{I|L}T];{[QN]|[E{I|L}]|[KN]}{[TV]|[{I|L}S]}[TP]M{I|L}[{I|L}T];[R{I|L}]EE{I|L}M{I|L}[{I|L}T];{[TV]|[{I|L}S]}{[QN]|[E{I|L}]|[KN]}[TP]M{I|L}[{I|L}T] 2.4801;1.5845;1.4977;1.4458;0.011046 -;-;-;-;- 66 1 1.829 42616.0 1.0 4503 4402 8893 SUDHL4_400M_050219_1,8907 SUDHL4_400M_050219_1,8907,IMVEIEGLTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8908 48.078 153.0 307190.0 25 0 38955.0 + 37261 TINELRLSI 9 90 529.8141390372286 1057.6137251412572 2 529.8140746951103 MULTI CID FTMS 0 0 0 8893 109198.8671875 1.0 0 0.0 15 Unmodified _TINELRLSI_ REV__ENSG00000113303|ENST00000340184|BTNL8;REV__nc|ENSG00000113303|Q6UX41-2|BTNL8;REV__nc|ENSG00000113303|Q6UX41-3|BTNL8;REV__nc|ENSG00000113303|Q6UX41-5|BTNL8 18.373094154950223 0.3393451798331396 5 [Q{I|L}]{I|L}{[ES]|[DT]|[{I|L}C]}R{I|L}S{I|L} 9 -1 + 25.992 0.0 0.0 2.4576 2.4576 84.38 0.0 0.0 0.0 8.033562476868724 1.894709658936634 1.894709658936634 25.99236265030948 0 0.6237125054200234 1.2218487496163564 0.2396518287104437 0.0 [Q{I|L}]{I|L}{[ES]|[DT]|[{I|L}C]}R{I|L}S{I|L} 2.4576 - 101 + 1 1.829 41034.1 1.0 4504 4402 8893 SUDHL4_400M_050219_1,8908 SUDHL4_400M_050219_1,8908,TINELRLSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8909 48.083 226.0 208730.0 25 0 12503.0 20394 LLGSELPRL 9 90 499.30515455970885 996.5957561862176 2 500.3042480349541 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _LLGSELPRL_ ENST00000416519.1_1_7:55713940-55714147:+|nuORF 18.13498045792455 0.3457906370836843 5 PMA 3 8 26.198 0.0 0.0 2.6287 0.0 0.0 0.0 694.4256918903268 694.4256918903268 13.433677739595034 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PMA 2.6287 - 52 + 1 1.829 40498.7 1.0 4505 4402 8893 SUDHL4_400M_050219_1,8909 SUDHL4_400M_050219_1,8909,LLGSELPRL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8910 48.09 430.0 68139.0 25 0 19698.0 + 8271 EQKLKRILERL 11 53 713.4482355124403 1424.8819180916803 2 713.4490234255791 MULTI CID FTMS 0 0 0 8893 78532.4453125 0.3937373139940697 -2 0.2769851684570312 17 Unmodified _EQKLKRILERL_ REV__ENST00000587125.1_1_17:58040633-58079710:-|nuORF 0.3506318815782774 0.8734936314171269 5 R 1 -1 5.4846 0.0 0.0 0.38491 0.0 0.0 878.5857277614056 387.17051111392817 1265.7562388753338 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.38491 + + 6 + 1 1.829 27716.0 1.0 4506 4402 8893 SUDHL4_400M_050219_1,8910 SUDHL4_400M_050219_1,8910,EQKLKRILERL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8911 48.104 800.0 406480.0 25 0 27525.0 -1 0 192 1035.1626989817055 3102.4662675453174 3 1035.497241199017 MULTI CID FTMS 0 0 0 8893 323834.59375 0.4567307344797512 -2 0.2769851684570312 18 5 D[PS]QSANVM{[QD]|[EN]|[WG]|[KD]|[RS]} 11 -1 69.83 0.0 0.0 2.2508 0.0 0.0 1911.967088767775 0.0 1911.967088767775 0.0 25.1590188516184 0.0 0.0 0 0.5 0.0 1.4436726795685342 1.1421590589602533 D[PS]QSANVM{[QD]|[EN]|[WG]|[KD]|[RS]} 2.2508 - 185747 1 1.829 216100.1 0.8999999761581421 4507 4402 8893 SUDHL4_400M_050219_1,8911 SUDHL4_400M_050219_1,8911, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8912 48.109 264.0 206990.0 25 0 17109.0 + 14397 IFHSNARQL 9 101 543.2967910188012 0 543.2975341677666 PEAK CID FTMS 0 0 0 8893 121249.6796875 0.7165999146542023 -2 0.2769851684570312 19 Unmodified _IFHSNARQL_ REV__ENSG00000135823|ENST00000258301|STX6;REV__nc|ENSG00000135823|O43752-2|STX6 11.640296217721598 0.2934555500198502 5 E 1 -1 8.9794 0.0 0.0 0.82792 0.0 0.0 713.4096698288148 239.10373865299064 952.5134084818054 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E 0.82792 - 31 + 1 1.829 47553.4 1.0 4508 4402 8893 SUDHL4_400M_050219_1,8912 SUDHL4_400M_050219_1,8912,IFHSNARQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8914 48.114 32.0 838550.0 25 0 217050.0 -1 RRPPRRRCR 9 48 655.3822954869948 1308.7500380407896 2 655.3826171755791 MULTI CID FTMS 0 0 0 8913 1404815.25 0.8872780516411631 -1 0.1005477905273437 1 Carbamidomethyl (C) _RRPPRRRC(Carbamidomethyl (C))R_ ENST00000378860.8_1_19:36545910-36549730:+|nuORF 0.5247636613948944 0.8963649302248013 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.867 34033.1 1.0 4509 4403 8913 SUDHL4_400M_050219_1,8914 SUDHL4_400M_050219_1,8914,RRPPRRRCR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8915 48.115 51.0 764510.0 25 0 210220.0 + 20107 LKERLQLANNK 11 66 663.8955472668355 1325.7765416004709 2 663.8958007693291 MULTI CID FTMS 0 0 0 8913 305240.65625 0.2859882825538294 -1 0.1005477905273437 2 Unmodified _LKERLQLANNK_ REV__ENSG00000091128|ENST00000388781|LAMB4;REV__nc|ENSG00000091128|A4D0S4-3|LAMB4 1.0714618166137932 0.8700927088084459 5 K 1 -1 1.5938 0.0 0.0 0.12022 0.0 0.0 911.530155957696 283.1186617486938 1194.6488177063898 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.12022 + + 1 + 1 1.867 41636.0 1.0 4510 4403 8913 SUDHL4_400M_050219_1,8915 SUDHL4_400M_050219_1,8915,LKERLQLANNK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8916 48.117 81.0 676750.0 25 0 132480.0 + -1 VLMVTVLQL 9 73 516.3140801822988 1030.6136074313974 2 516.3143798708916 MULTI CID FTMS 0 0 0 8913 445283.5625 0.1405453007040307 -2 0.2477188110351562 3 Oxidation (M) _VLM(Oxidation (M))VTVLQL_ REV__ENSG00000164199|ENST00000405460|ADGRV1;REV__nc|ENSG00000164199|Q8WXG9-2|ADGRV1 6.723162845929126 0.6799819581413107 5 [{I|L}V]Y 3 -1 19.666 0.0 0.0 1.9082 0.0 0.0 0.0 652.3778780572874 652.3778780572874 9.388175805881346 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}V]Y 1.9082 - 8 + 1 1.867 45950.4 1.0 4511 4403 8913 SUDHL4_400M_050219_1,8916 SUDHL4_400M_050219_1,8916,VLMVTVLQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8917 48.119 99.0 559950.0 25 0 76369.0 + 44119 YLDEYIARM 9 68 587.2838017144707 1172.5530504957412 2 587.2843505740166 MULTI CID FTMS 0 0 0 8913 303961.59375 0.7954296758435314 -1 0.1005477905273437 4 Unmodified _YLDEYIARM_ ENSG00000103197|ENST00000219476|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-4|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-7|TSC2 32.78568957990786 0.1150597335874693 5 Y{I|L}DEY{I|L} 6 3 76.899 0.0 0.0 6.5583 0.0 0.0 0.0 373.1670321100219 373.1670321100219 66.09698143619902 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + Y{I|L}DEY{I|L} 6.5583 + + 64 + 1 1.867 49665.5 1.0 4512 4403 8913 SUDHL4_400M_050219_1,8917 SUDHL4_400M_050219_1,8917,YLDEYIARM True True YLDEYIARM 48.119433 587.284350574017 2902465.25 8913.0 nc|ENSG00000103197|P49815-2|TSC2;;nc|ENSG00000103197|P49815-3|TSC2;;nc|ENSG00000103197|P49815-5|TSC2;;nc|ENSG00000103197|P49815-4|TSC2;;ENSG00000103197|ENST00000219476|TSC2;;nc|ENSG00000103197|P49815-7|TSC2;;nc|ENSG00000103197|P49815-6|TSC2 4.245981653531392 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8918 48.122 101.0 610340.0 25 0 57337.0 + 1092 AGLLLAAWLS 10 93 507.8007869566188 1013.5870209800376 2 507.8008300662041 MULTI CID FTMS 0 0 0 8913 299309.90625 0.4765720370899457 -1 0.1005477905273437 5 Unmodified _AGLLLAAWLS_ REV__ENSG00000074842|ENST00000262947|MYDGF 37.97399986684836 0.1789611706409123 5 Q{I|L}{I|L}{I|L}G[RD]S{I|L} 9 -1 + 59.998 0.0 0.0 5.9193 5.9193 93.453 0.0 0.0 0.0 43.36484866671969 14.973024840566469 14.973024840566469 41.76178558975489 0 0.7742275032520141 1.6989700043360187 0.9436726795685342 0.0 Q{I|L}{I|L}{I|L}G[RD]S{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}D{I|L}[Q{I|L}]{I|L};AAW{[TV]|[{I|L}S]}{I|L}[Q{I|L}]{I|L} 5.9193;1.7992;1.0691 -;-;- 174 + 1 1.867 53238.5 1.0 4513 4403 8913 SUDHL4_400M_050219_1,8918 SUDHL4_400M_050219_1,8918,AGLLLAAWLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8919 48.126 240.0 325720.0 25 0 67905.0 + 33727 SLADIAQKL 9 102 479.7810236945226 957.5474944558453 2 479.7816955447197 MULTI CID FTMS 0 0 0 8913 174352.53125 0.405677231994026 -2 0.2477188110351562 6 Unmodified _SLADIAQKL_ ENSG00000108344|ENST00000264639|PSMD3;ENST00000415039.7_1_17:38140716-38152959:+|nuORF;ENST00000485835.1_1_17:38151035-38151804:+|nuORF;nc|ENSG00000108344|O43242-2|PSMD3 45.69961567697781 0.0497987121815769 5 {[TV]|[{I|L}S]}AD{I|L}AQK{I|L} 9 0 + 81.228 0.0 0.0 8.4829 8.4829 94.667 0.0 0.0 0.0 54.6744928440834 10.908458057352206 10.908458057352206 9.208187539523747 0 1.1861818737241734 2.0 0.0 0.5891368308784531 + + {[TV]|[{I|L}S]}AD{I|L}AQK{I|L};{[TV]|[{I|L}S]}AD{I|L}A[AG]K{I|L};{[TV]|[{I|L}S]}W{I|L}AQK{I|L};{[TV]|[{I|L}S]}W{I|L}A[AG]K{I|L};{[TV]|[{I|L}S]}A[W{I|L}]QK{I|L};{[TV]|[{I|L}S]}A[W{I|L}][AG]K{I|L} 8.4829;7.5213;7.4088;6.4415;5.765;4.7977 +;-;-;-;-;- + 264 + 1 1.867 63064.8 1.0 4514 4403 8913 SUDHL4_400M_050219_1,8919 SUDHL4_400M_050219_1,8919,SLADIAQKL True True SLADIAQKL 48.126085 479.78169554472 3519940.75 8913.0 ENST00000415039.7_1_17:38140716-38152959:+|nuORF;;ENST00000485835.1_1_17:38151035-38151804:+|nuORF;;ENSG00000108344|ENST00000264639|PSMD3;;nc|ENSG00000108344|O43242-2|PSMD3 6.39764928817749 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8920 48.129 141.0 330490.0 25 0 73158.0 + -1 LAMIIFLVL 9 61 524.8271347842657 1047.6397166353313 2 524.8278076052666 MULTI CID FTMS 0 0 0 8913 132973.796875 0.0632324506665918 -2 0.2477188110351562 7 Oxidation (M) _LAM(Oxidation (M))IIFLVL_ REV__ENSG00000081800|ENST00000194130|SLC13A1 0.6014990680409731 0.8936861360942873 5 E 1 -1 3.0989 0.0 0.0 0.2958 0.0 0.0 839.5484060657985 76.02485834293202 915.5732644087306 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.2958 - 5 + 1 1.867 40364.9 1.0 4515 4403 8913 SUDHL4_400M_050219_1,8920 SUDHL4_400M_050219_1,8920,LAMIIFLVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8921 48.132 134.0 297520.0 25 0 38632.0 + + 37216 RIMDPEIAL 9 74 529.794729948119 1057.5749069630378 2 529.2886840701103 MULTI CID FTMS 0 0 0 8913 117531.9609375 0.6122169754808666 -3 0.377532958984375 8 Unmodified _TIINSVNNAL_ ENSG00000177613|ENST00000331173|CSTF2T 14.838274106304384 0.5985701837916485 5 PE{I|L}[KG] 5 -1 22.218 0.0 0.0 2.1009 0.0 0.0 515.2531556182989 0.0 515.2531556182989 0.0 6.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 PE{I|L}[KG] 2.1009 - 53 1 1.867 36166.6 1.0 4516 4403 8913 SUDHL4_400M_050219_1,8921 SUDHL4_400M_050219_1,8921,TIINSVNNAL False False RIMDPEIAL 48.131668 529.28868407011 5989372.5 8913.0 ENSG00000177613|ENST00000331173|CSTF2T 1.5105978846549988 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8922 48.134 139.0 739430.0 25 0 99484.0 + 33523 SILEDPPSI 9 113 485.757749146479 969.500945359758 2 485.7585937380791 MULTI CID FTMS 0 0 0 8913 106082.203125 0.2396355181176759 3 -0.3679962158203125 9 Unmodified _SILEDPPSI_ ENSG00000064102|ENST00000261191|INTS13;nc|ENSG00000064102|Q9NVM9-2|INTS13 71.13359017698441 0.0206607516130725 5 {[TV]|[{I|L}S]}PPDE{I|L}{[TV]|[{I|L}S]} 9 4 + 54.772 0.0 0.0 5.6495 5.6495 90.004 0.0 0.0 0.0 5.316206019771528 11.406877742051762 5.316206019771528 9.458865705675876 0 0.3807196863200844 2.0 0.6861818737241735 0.0 {[TV]|[{I|L}S]}PPDE{I|L}{[TV]|[{I|L}S]};[PS]P{I|L}DE{I|L}{[TV]|[{I|L}S]};[PS]PD{I|L}E{I|L}{[TV]|[{I|L}S]};[PS]{I|L}PDE{I|L}{[TV]|[{I|L}S]};{[HG]|PP}S{I|L}DE{I|L}{[TV]|[{I|L}S]};{[HG]|PP}SD{I|L}E{I|L}{[TV]|[{I|L}S]};{[QN]|[E{I|L}]|[KN]}DPPS{I|L}{[TV]|[{I|L}S]};[DP][PS]{I|L}E{I|L}{[TV]|[{I|L}S]};[DP]{[QN]|[E{I|L}]|[KN]}PS{I|L}{[TV]|[{I|L}S]};[DP][VP]TE{I|L}{[TV]|[{I|L}S]} 5.6495;4.6738;4.4087;3.8707;3.5512;3.2861;3.2008;3.1398;2.4615;2.3716 -;-;-;-;-;-;-;-;-;- 474 1 1.867 83100.6 1.0 4517 4403 8913 SUDHL4_400M_050219_1,8922 SUDHL4_400M_050219_1,8922,SILEDPPSI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8923 48.148 800.0 125380.0 25 0 9028.9 -1 0 103 982.4713953382573 1962.9282377433144 2 982.4716064333916 MULTI CID FTMS 0 0 0 8913 91590.546875 0.4462797641593145 -2 0.2477188110351562 10 5 [NP]{I|L}NE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]EN{I|L}DV 14 -1 42.027 0.0 0.0 2.141 0.0 0.0 0.0 256.05602029630194 256.05602029630194 15.538588578747362 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.7614393726401688 [NP]{I|L}NE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[YK]EN{I|L}DV 2.141 - 1418 1 1.867 69126.4 0.5799999833106995 4518 4403 8913 SUDHL4_400M_050219_1,8923 SUDHL4_400M_050219_1,8923, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8924 48.15 74.0 323750.0 25 0 66271.0 39716 VEIKRRRHHL 10 55 672.4092426983802 1342.8039324635604 2 672.4081298708916 MULTI CID FTMS 0 0 0 8913 83506.046875 0.1097136115499702 -1 0.1005477905273437 11 Unmodified _VEIKRRRHHL_ ENSG00000166153|ENST00000550587|DEPDC4;nc|ENSG00000166153|Q8N2C3|DEPDC4 3.5964929083625545 0.7100006075494749 5 {NN|[MP]|[D{I|L}]|[EV]}{I|L} 3 7 13.925 0.0 0.0 1.037 0.0 0.0 0.0 998.586072926704 998.586072926704 11.874081049124504 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 + {NN|[MP]|[D{I|L}]|[EV]}{I|L} 1.037 + + 12 1 1.867 29313.0 1.0 4519 4403 8913 SUDHL4_400M_050219_1,8924 SUDHL4_400M_050219_1,8924,VEIKRRRHHL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8926 48.166 800.0 137370.0 25 0 36594.0 35176 SRSRHRRRSR 10 106 677.3953084722584 1352.7760640113167 2 677.3951904177666 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _SRSRHRRRSR_ ENSG00000179335|ENST00000395066|CLK3;ENST00000454830.6_1_15:74908152-74912599:+|nuORF;nc|ENSG00000179335|P49761-2|CLK3;nc|ENSG00000179335|P49761-3|CLK3 1.4819007175156935 0.719781833666733 5 H 1 9 9.0344 0.0 0.0 0.66784 0.0 0.0 1197.7092895745964 0.0 1197.7092895745964 0.0 0.2120192427654323 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 0.66784 + + 18 + 1 1.867 98420.5 0.7699999809265137 4520 4404 8925 SUDHL4_400M_050219_1,8926 SUDHL4_400M_050219_1,8926,SRSRHRRRSR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8927 48.168 79.0 755000.0 25 0 116290.0 + 7672 EKLKELYLEV 10 78 632.3613484730581 1262.708144012916 2 632.3612548708916 MULTI CID FTMS 0 0 0 8925 437911.90625 1.0 0 0.0 2 Unmodified _EKLKELYLEV_ REV__ENSG00000103978|ENST00000389834|TMEM87A;REV__ENST00000562946.5_1_15:42519884-42565596:-|nuORF;REV__ENST00000563371.5_1_15:42553198-42564267:-|nuORF;REV__ENST00000569075.5_1_15:42525398-42565582:-|nuORF;REV__nc|ENSG00000103978|Q8NBN3-2|TMEM87A;REV__nc|ENSG00000103978|Q8NBN3-3|TMEM87A 3.2813086475875832 0.7114585191678878 5 C 1 -1 3.9794 0.0 0.0 0.31515 0.0 0.0 564.334894309796 592.3498018854124 1156.6846961952083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.31515 - 7 + 1 1.867 51578.9 1.0 4521 4404 8925 SUDHL4_400M_050219_1,8927 SUDHL4_400M_050219_1,8927,EKLKELYLEV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8928 48.175 366.0 511190.0 25 0 103890.0 11834 GLPPRSVLVK 10 133 533.3403791018357 1064.6662052704712 2 533.3409301638603 MULTI CID FTMS 0 0 0 8925 351765.21875 0.51419727894699 -1 0.0408782958984375 3 Unmodified _GLPPRSVLVK_ ENSG00000140459|ENST00000268053|CYP11A1 3.2813086475875832 0.7114585191678878 5 {I|L} 1 9 9.3971 0.0 0.0 0.88264 0.0 0.0 933.5712173327744 0.0 933.5712173327744 0.0 0.0648248858218369 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.88264 + + 35 + 1 1.867 147701.6 1.0 4522 4404 8925 SUDHL4_400M_050219_1,8928 SUDHL4_400M_050219_1,8928,GLPPRSVLVK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8929 48.177 119.0 406850.0 25 0 56961.0 + + 20310 LLEPFVHQV 9 71 540.8072427873527 1079.5999326415051 2 541.3058959841728 MULTI CID FTMS 0 0 0 8925 297445.71875 0.3829777414723015 -4 0.4184112548828125 4 Unmodified _LLEQLEKAH_ nc|ENSG00000068745|Q9UHH9-5|IP6K2;nc|ENSG00000068745|Q9UHH9-3|IP6K2;nc|ENSG00000068745|Q9UHH9-4|IP6K2;nc|ENSG00000068745|Q9UHH9-2|IP6K2;nc|ENSG00000068745|Q9UHH9-6|IP6K2;ENSG00000068745|ENST00000328631|IP6K2 11.640296217721598 0.521594087909532 5 {I|L}{I|L}E{I|L}C(Carbamidomethyl (C))P 6 -1 29.64 0.0 0.0 2.7455 0.0 0.0 0.0 351.190867559434 351.190867559434 6.18440000316717 0.0 0.0 0.0 0 0.218765315847925 2.0 0.3807196863200844 0.0 {I|L}{I|L}E{I|L}C(Carbamidomethyl (C))P 2.7455 - 153 1 1.867 41549.7 1.0 4523 4404 8925 SUDHL4_400M_050219_1,8929 SUDHL4_400M_050219_1,8929,LLEQLEKAH False False LLEPFVHQV 48.177354 541.305895984173 2726836.5 8925.0 nc|ENSG00000068745|Q9UHH9-5|IP6K2;;nc|ENSG00000068745|Q9UHH9-3|IP6K2;;nc|ENSG00000068745|Q9UHH9-4|IP6K2;;nc|ENSG00000068745|Q9UHH9-2|IP6K2;;nc|ENSG00000068745|Q9UHH9-6|IP6K2;;ENSG00000068745|ENST00000328631|IP6K2 7.019627253214519 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8930 48.187 566.0 312960.0 25 0 23942.0 + 40900 VLRSPQGLVHR 11 131 421.255685966776 1260.745228500528 3 421.2559997439384 MULTI CID FTMS 0 0 0 8925 126000.75 0.1723810443202194 -1 0.0408782958984375 5 Unmodified _VLRSPQGLVHR_ REV__ENSG00000095951|ENST00000379388|HIVEP1 20.41453444215458 0.6105011870913812 5 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 -1 + 113.89 0.0 0.0 9.0336 9.0336 94.474 0.0 0.0 0.0 91.49462623559128 20.453715727355984 20.453715727355984 9.164539485499262 0 0.8209991640913001 2.0 0.0 1.055462187404089 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}{[ET]|[MV]}S{I|L};{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}{[ET]|[MV]}S{I|L} 9.0336;8.3067;5.97;4.909 -;-;-;- 383 + 1 1.867 151292.7 1.0 4524 4404 8925 SUDHL4_400M_050219_1,8930 SUDHL4_400M_050219_1,8930,VLRSPQGLVHR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8931 48.201 800.0 190900.0 25 0 50774.0 + 20336 LLFGVVLRTI 10 118 565.8664885337731 1129.7184241343462 2 565.8669921755791 MULTI CID FTMS 0 0 0 8925 117688.84375 0.2767386480214845 -1 0.0408782958984375 6 Unmodified _LLFGVVLRTI_ REV__ENSG00000171860|ENST00000307637|C3AR1 3.944395688203298 0.708391353636983 5 {I|L} 1 -1 11.109 0.0 0.0 0.98336 0.0 0.0 998.6232225736024 0.0 998.6232225736024 0.0 2.740923052725538 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.98336 + + 82 + 1 1.867 115977.5 0.6000000238418579 4525 4404 8925 SUDHL4_400M_050219_1,8931 SUDHL4_400M_050219_1,8931,LLFGVVLRTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8932 48.215 800.0 236850.0 25 0 76564.0 19269 LEKKVKKKF 9 124 574.379657105452 1146.744761277704 2 574.3798095583916 MULTI CID FTMS 0 0 0 8925 117611.828125 0.4534726138557303 -1 0.0408782958984375 7 Unmodified _LEKKVKKKF_ ENSG00000100902|ENST00000261479|PSMA6;ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;ENST00000554457.1_1_14:35782088-35782304:+|nuORF;nc|ENSG00000100902|P60900-2|PSMA6;nc|ENSG00000100902|P60900-3|PSMA6 1.844237919475145 0.850302753031785 5 Y 1 9 10.278 0.0 0.0 0.89624 0.0 0.0 965.6701743409836 0.0 965.6701743409836 0.0 1.2432096310214646 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.89624 - 29 + 1 1.867 143515.9 0.6000000238418579 4526 4404 8925 SUDHL4_400M_050219_1,8932 SUDHL4_400M_050219_1,8932,LEKKVKKKF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8933 48.219 240.0 221310.0 25 0 21154.0 + 32590 SAVGHVFSL 9 79 458.7479564041893 0 458.7479125857353 PEAK CID FTMS 0 0 0 8925 113663.6640625 1.0 0 0.0 8 Unmodified _SAVGHVFSL_ ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA 20.453626601364224 0.1969592619112565 5 V 1 8 6.9897 0.0 0.0 0.7635 0.0 0.0 523.2650950820131 290.12644373111567 813.3915388131288 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.7635 + + 26 + 1 1.867 48318.5 1.0 4527 4404 8925 SUDHL4_400M_050219_1,8933 SUDHL4_400M_050219_1,8933,SAVGHVFSL False True SAVGHVFSL 48.219412 458.747912585735 702282.5625 8925.0 nc|ENSG00000164944|Q69YN4-4|VIRMA;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA 4.707197507222493 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8934 48.234 800.0 93213.0 25 0 15533.0 + 13750 HRRRRRRTPP 10 110 694.4218577524073 1386.8291625716145 2 694.4214965701103 MULTI CID FTMS 0 0 0 8925 105481.9453125 0.2336969676367074 3 -0.4366302490234375 9 Unmodified _HRRRRRRTPP_ REV__nc|ENSG00000171862|P60484-2|PTEN 1.6526216038709556 0.7189921496796233 5 {I|L} 1 -1 9.2694 0.0 0.0 0.66839 0.0 0.0 1255.7339457520816 0.0 1255.7339457520816 0.0 8.300259691528247 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.66839 - 62 + 1 1.867 64056.3 0.6200000047683716 4528 4404 8925 SUDHL4_400M_050219_1,8934 SUDHL4_400M_050219_1,8934,HRRRRRRTPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8935 48.248 800.0 124220.0 25 0 9616.9 + 14913 ILLPDNVHYV 10 107 591.8297085426577 1181.6448641521154 2 591.8291503787041 MULTI CID FTMS 0 0 0 8925 86950.0703125 1.0 0 0.0 10 Unmodified _ILLPDNVHYV_ ENSG00000039123|ENST00000230640|MTREX 34.40172386719151 0.2166836008404837 5 {I|L}{I|L}{I|L}PD{[NV]|[RG]}H[YV] 10 0 + 52.497 0.0 0.0 4.4427 4.4427 87.9 0.0 0.0 0.0 25.84121882396211 4.436974992327123 4.436974992327123 18.12913356642856 0 0.805462187404089 2.0 0.3807196863200844 0.0 + + {I|L}{I|L}{I|L}PD{[NV]|[RG]}H[YV];{I|L}{I|L}{I|L}P[NP][C(Carbamidomethyl (C))D]K{I|L};{I|L}{I|L}{I|L}PD[{I|L}P]{[C(Carbamidomethyl (C))E]|[WC]}{I|L};{I|L}{I|L}{I|L}P[NP][WK]{[DS]|[MA]|[CV]|TT} 4.4427;2.9084;2.8414;2.5788 +;-;-;- + 238 + 1 1.867 76924.2 0.5400000214576721 4529 4404 8925 SUDHL4_400M_050219_1,8935 SUDHL4_400M_050219_1,8935,ILLPDNVHYV False True ILLPDNVHYV 48.248249 591.829150378704 609434.5625 8925.0 ENSG00000039123|ENST00000230640|MTREX 6.856297334035237 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8936 48.262 800.0 103400.0 25 0 22363.0 + 35178 SRSRRRRRER 10 96 707.9218640385022 0 707.9217407107353 PEAK CID FTMS 0 0 0 8925 85904.5 0.4942672195356221 -1 0.0408782958984375 11 Unmodified _SRSRRRRRER_ REV__ENSG00000116754|ENST00000370949|SRSF11;REV__ENSG00000153914|ENST00000334121|SREK1;REV__ENST00000522214.1_1_5:65470720-65474693:+|nuORF;REV__nc|ENSG00000116754|Q05519-2|SRSF11;REV__nc|ENSG00000153914|Q8WXA9|SREK1 1.4819007175156935 0.3961065659209837 5 T 1 -1 2.4743 0.0 0.0 0.175 0.0 0.0 850.5456801260294 459.22382532291255 1309.769505448942 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.175 - 6 + 1 1.867 74484.5 0.550000011920929 4530 4404 8925 SUDHL4_400M_050219_1,8936 SUDHL4_400M_050219_1,8936,SRSRRRRRER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8937 48.271 448.0 294340.0 25 0 41350.0 + -1 KQKFKMVEKV 10 103 640.8754059442647 1279.7362589553293 2 640.8757812380791 MULTI CID FTMS 0 0 0 8925 213505.0 1.0 0 0.0 12 Oxidation (M) _KQKFKM(Oxidation (M))VEKV_ REV__ENSG00000188596|ENST00000524981|CFAP54;REV__nc|ENSG00000188596|Q96N23-2|CFAP54 3.2813086475875832 0.7114585191678878 5 C 1 -1 5.0663 0.0 0.0 0.39588 0.0 0.0 537.3377807657006 636.3642061822874 1173.701986947988 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 C 0.39588 - 46 + 1 1.867 103153.1 1.0 4531 4404 8925 SUDHL4_400M_050219_1,8937 SUDHL4_400M_050219_1,8937,KQKFKMVEKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8938 48.285 800.0 136770.0 25 0 42751.0 + 31721 RRRRRRPAER 10 113 704.9345904430396 1407.8546279528791 2 704.9352294802666 MULTI CID FTMS 0 0 0 8925 210615.21875 1.0 0 0.0 13 Unmodified _RRRRRRPAER_ REV__ENST00000469704.1_1_20:17934783-17949290:-|nuORF 1.4819007175156935 0.719781833666733 5 EEAW 4 -1 12.223 0.0 0.0 0.86821 0.0 0.0 0.0 889.6251107011791 889.6251107011791 1.967312936727876 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 EEAW 0.86821 - 93 1 1.867 86123.2 0.7699999809265137 4532 4404 8925 SUDHL4_400M_050219_1,8938 SUDHL4_400M_050219_1,8938,RRRRRRPAER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8939 48.299 800.0 196810.0 25 0 17958.0 + + 37754 ALSNLEVKL 9 186 494.3010030019718 986.5874530707435 2 494.3001281619072 MULTI CID FTMS 0 0 0 8925 164827.484375 0.0557458293565812 7 -0.9642372131347656 14 Unmodified _TLRLRESI_ nc|ENSG00000149781|Q86UX7|FERMT3;ENST00000541326.5_1_11:63979141-63987695:+|nuORF;ENST00000546255.1_1_11:63979177-63987262:+|nuORF;ENST00000540957.1_1_11:63987010-63987876:+|nuORF;ENSG00000149781|ENST00000345728|FERMT3 18.13498045792455 0.6430038125133779 5 [{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}EVK{I|L} 9 -1 + 39.714 0.0 0.0 4.0254 4.0254 86.668 0.0 0.0 0.0 17.340105306359703 9.965173111391906 9.965173111391906 18.548578773034134 0 0.3807196863200844 1.6989700043360187 0.0 0.0 [{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}EVK{I|L};[{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}E[K{I|L}]V;[KG][WK]EVK{I|L};[{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}[R{I|L}]S{I|L};[{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}[R{I|L}]TV;[{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}[R{I|L}]{I|L}S;[KG][WK]E[K{I|L}]V 4.0254;2.1454;1.9156;1.6873;1.4027;1.0121;0.035508 -;-;-;-;-;-;- 322 + 1 1.867 124022.1 0.6200000047683716 4533 4404 8925 SUDHL4_400M_050219_1,8939 SUDHL4_400M_050219_1,8939,TLRLRESI False False ALSNLEVKL 48.298878 494.300128161907 25947874.0 8925.0 nc|ENSG00000149781|Q86UX7|FERMT3;;ENST00000541326.5_1_11:63979141-63987695:+|nuORF;;ENST00000546255.1_1_11:63979177-63987262:+|nuORF;;ENST00000540957.1_1_11:63987010-63987876:+|nuORF;;ENSG00000149781|ENST00000345728|FERMT3 1.7319963773091631 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8940 48.314 800.0 149970.0 25 0 9214.1 -1 0 170 406.245959488856 405.238683022256 1 406.2445556521416 MULTI CID FTMS 0 0 0 8925 141726.859375 1.0 0 0.0 15 5 P 1 -1 8.2488 0.0 0.0 2.0355 0.0 0.0 290.1747467203013 0.0 290.1747467203013 0.0 0.5153516085643739 0.0 0.0 0 0.0 0.0 0.0 0.0 P 2.0355 - 15 + 1 1.867 91969.2 0.9399999976158142 4534 4404 8925 SUDHL4_400M_050219_1,8940 SUDHL4_400M_050219_1,8940, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8941 48.328 800.0 89015.0 25 0 23091.0 + 7574 EIKKWLELLQA 11 89 685.9088898580812 0 685.9094726443291 PEAK CID FTMS 0 0 0 -1 0 16 Unmodified _EIKKWLELLQA_ REV__nc|ENSG00000071242|Q15349-2|RPS6KA2;REV__nc|ENSG00000071242|Q15349-3|RPS6KA2 4.189502756095605 0.4761840153648598 5 K 1 -1 0.48455 0.0 0.0 0.035374 0.0 0.0 911.5303213647968 327.1457398894812 1238.676061254278 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.035374 + + 1 + 1 1.867 65084.7 0.5699999928474426 4535 4404 8925 SUDHL4_400M_050219_1,8941 SUDHL4_400M_050219_1,8941,EIKKWLELLQA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8943 48.333 65.0 692250.0 25 0 91584.0 + 9669 FLQEGDLISA 10 80 546.7822267934887 1091.5499006537773 2 546.7825805544853 MULTI CID FTMS 0 0 0 8942 954888.125 0.3877649381863774 1 -0.14947509765625 1 Unmodified _FLQEGDLISA_ ENSG00000130713|ENST00000372358|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2 22.736283301280096 0.4578556481593033 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 3 8 20.558 0.0 0.0 1.8834 0.0 0.0 0.0 741.3419593298116 741.3419593298116 5.298086289833535 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.4247425010840047 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 1.8834 - 139 1 1.879 40695.0 1.0 4536 4405 8942 SUDHL4_400M_050219_1,8943 SUDHL4_400M_050219_1,8943,FLQEGDLISA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8944 48.335 72.0 2485400.0 25 0 208310.0 + 31274 RLWPKIQGL 9 113 555.8426708728567 1109.6707888125134 2 555.8428832888603 MULTI CID FTMS 0 0 0 8942 1434641.625 1.0 0 0.0 2 Unmodified _RLWPKIQGL_ ENSG00000168209|ENST00000307365|DDIT4 92.4914307365334 0.0139747738690111 5 {I|L}RWPK{I|L}QG{I|L} 9 2 + 85.721 0.0 0.0 7.7249 7.7249 88.27 0.0 0.0 0.0 72.16444199738774 14.973024840566469 14.973024840566469 3.455612550363796 0 2.6861818737241734 0.9208187539523752 0.0 1.1549471895720984 {I|L}RWPK{I|L}QG{I|L};{I|L}WRPK{I|L}QG{I|L};{I|L}RWPK{I|L}[AG]G{I|L};{I|L}WRPK{I|L}[AG]G{I|L};{I|L}RWPK{I|L}{I|L}{[QG]|[NA]};{I|L}WRPK{I|L}{I|L}{[QG]|[NA]} 7.7249;7.4135;6.552;6.2406;5.8293;5.5179 -;-;-;-;-;- 1274 + 1 1.879 138152.0 1.0 4537 4405 8942 SUDHL4_400M_050219_1,8944 SUDHL4_400M_050219_1,8944,RLWPKIQGL True True RLWPKIQGL 48.334848 555.84288328886 44176965.0 8942.0 ENSG00000168209|ENST00000307365|DDIT4 7.442204475402832 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8945 48.339 207.0 617660.0 25 0 48717.0 -1 0 110 974.9619527893966 1947.909352645593 2 974.9634887576104 MULTI CID FTMS 0 0 0 8942 512615.375 0.9818055518064478 1 -0.14947509765625 3 5 [NP]{I|L}NAD[HA]T{M(Oxidation (M))|F}PAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 18 -1 + 96.814 0.0 0.0 4.9701 4.9701 79.62 0.0 0.0 0.0 2.966326948427337 2.966326948427337 2.966326948427337 1.842370352794788 0 2.110924374808178 1.0969100130080565 0.3494850021680094 1.5356668758921828 [NP]{I|L}NAD[HA]T{M(Oxidation (M))|F}PAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAC(Carbamidomethyl (C))YT{M(Oxidation (M))|F}PAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAP{M(Oxidation (M))|F}T[HA]DYQ{[TV]|[{I|L}S]};[NP]VQAD[HA]T{M(Oxidation (M))|F}PAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NW[HA]T{M(Oxidation (M))|F}PAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]VQAC(Carbamidomethyl (C))YT{M(Oxidation (M))|F}PAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAD[RH]YPAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]VQW[HA]T{M(Oxidation (M))|F}PAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAPY[RH]DYQ{[TV]|[{I|L}S]};[NP]VQAD[RH]YPAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.9701;4.8756;4.8179;4.8156;4.7786;4.721;4.7145;4.6241;4.5629;4.5599 -;-;-;-;-;-;-;-;-;- 20997 1 1.879 88478.1 1.0 4538 4405 8942 SUDHL4_400M_050219_1,8945 SUDHL4_400M_050219_1,8945, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8946 48.342 146.0 580810.0 25 0 34720.0 + 11246 GESDDSILRL 10 106 552.7801176712202 1103.5456824092405 2 552.7801391482353 MULTI CID FTMS 0 0 0 8942 438644.90625 0.2852388752945736 -1 0.177642822265625 4 Unmodified _GESDDSILRL_ ENSG00000171858|ENST00000343986|RPS21;ENST00000370562.1_1_20:60963217-60963421:+|nuORF 50.13029200064056 0.0793861841501087 5 {[DA]|[EG]}SDDS{I|L}{I|L}R{I|L} 10 0 + 95.288 0.0 0.0 8.6347 8.6347 88.767 0.0 0.0 0.0 58.17507711771957 11.760912590556812 11.760912590556812 3.0102999566398125 0 1.305462187404089 2.0 0.7742275032520141 0.2887254899964357 + + {[DA]|[EG]}SDDS{I|L}{I|L}R{I|L};{[DA]|[EG]}SDD{I|L}S{I|L}R{I|L};{[DA]|[EG]}{I|L}[RN]HHE{I|L};{[DA]|[EG]}{I|L}[RN][C(Carbamidomethyl (C))S]R{I|L};{[DS]|[MA]|[CV]|TT}D[WK]{I|L}VE{I|L};[C(Carbamidomethyl (C))K]V[KA]{[C(Carbamidomethyl (C))E]|[WC]}P{I|L} 8.6347;8.3619;3.7165;3.468;1.9992;0.80454 +;-;-;-;-;- + 152 + 1 1.879 68288.8 1.0 4539 4405 8942 SUDHL4_400M_050219_1,8946 SUDHL4_400M_050219_1,8946,GESDDSILRL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8947 48.347 311.0 245660.0 25 0 59144.0 + 12486 GVARRWRRRQG 11 87 699.4085730626555 1396.8025931921109 2 699.4087402224541 MULTI CID FTMS 0 0 0 8942 301402.34375 0.9038820291678872 -1 0.177642822265625 5 Unmodified _GVARRWRRRQG_ REV__ENST00000367330.5_1_1:201123337-201123409:-|nuORF 1.4819007175156935 0.86815623132643 5 {M(Oxidation (M))|F} 1 -1 1.9897 0.0 0.0 0.14245 0.0 0.0 1022.6090500526548 224.10471521549064 1246.7137652681454 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.14245 - 11 + 1 1.879 72824.3 1.0 4540 4405 8942 SUDHL4_400M_050219_1,8947 SUDHL4_400M_050219_1,8947,GVARRWRRRQG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8948 48.353 331.0 126890.0 25 0 17791.0 + 10758 FYKQVIRQLT 10 76 648.374464817093 1294.734376700986 2 648.3741943240166 MULTI CID FTMS 0 0 0 8942 271269.46875 0.5119896057054669 1 -0.14947509765625 6 Unmodified _FYKQVIRQLT_ REV__ENSG00000128641|ENST00000392318|MYO1B;REV__nc|ENSG00000128641|O43795-2|MYO1B 3.2813086475875832 0.7114585191678878 5 MM 2 -1 4.6927 0.0 0.0 0.36245 0.0 0.0 552.3347397226427 477.3042086236938 1029.6389483463363 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MM 0.36245 - 7 + 1 1.879 39635.1 1.0 4541 4405 8942 SUDHL4_400M_050219_1,8948 SUDHL4_400M_050219_1,8948,FYKQVIRQLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8949 48.362 461.0 186460.0 25 0 25634.0 19843 LHKKIRDAEIS 11 105 437.2570617592038 1308.7493558778117 3 437.2569457888603 MULTI CID FTMS 0 0 0 8942 257976.140625 1.0 0 0.0 7 Unmodified _LHKKIRDAEIS_ ENSG00000164440|ENST00000358430|TXLNB 1.3295316138638542 0.8688751186870782 5 NV 2 11 7.0783 0.0 0.0 0.54085 0.0 0.0 758.4607949420678 334.16697107486567 1092.6277660169335 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NV 0.54085 - 9 + 1 1.879 79857.1 1.0 4542 4405 8942 SUDHL4_400M_050219_1,8949 SUDHL4_400M_050219_1,8949,LHKKIRDAEIS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8950 48.369 431.0 322040.0 25 0 69481.0 + + 23010 ILDDSHLLV 9 131 512.2928523715258 1022.5711518098516 2 512.7877685427666 MULTI CID FTMS 0 0 0 8942 245324.578125 0.5380002016202123 4 -0.5409736633300781 8 Unmodified _LSHQRRLN_ ENSG00000021776|ENST00000156471|AQR 14.581692164780916 0.6954967302934248 5 {[TV]|[{I|L}S]}HDD{I|L}{I|L} 7 -1 47.629 0.0 0.0 4.6578 0.0 0.0 0.0 226.15069038915297 226.15069038915297 20.076133326277613 0.0 0.0 0.0 0 0.0 1.6989700043360187 1.5189301784845295 0.0 {[TV]|[{I|L}S]}HDD{I|L}{I|L} 4.6578 - 1019 1 1.879 109400.0 1.0 4543 4405 8942 SUDHL4_400M_050219_1,8950 SUDHL4_400M_050219_1,8950,LSHQRRLN False False ILDDSHLLV 48.369301 512.787768542767 1768757.0 8942.0 ENSG00000021776|ENST00000156471|AQR 4.139257351557414 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8951 48.383 800.0 210650.0 25 0 23718.0 + 33842 ATIDPDTISAL 11 175 558.7932606334945 1115.5719683337888 2 558.7928344607353 MULTI CID FTMS 0 0 0 8942 200352.921875 1.0 0 0.0 9 Unmodified _SLEPEASILAS_ nc|ENSG00000166478|P52747-3|ZNF143;nc|ENSG00000166478|P52747-2|ZNF143;ENSG00000166478|ENST00000396602|ZNF143 32.78568957990786 0.3235288296534633 5 {[TV]|[{I|L}S]}EPDAT 7 6 27.74 0.0 0.0 2.4866 0.0 0.0 0.0 399.2248370810734 399.2248370810734 6.817557825297232 0.0 0.0 0.0 0 0.0 0.8538719643217619 1.7017188504113845 0.0 {[TV]|[{I|L}S]}EPDAT 2.4866 - 2036 1 1.879 127147.4 0.7200000286102295 4544 4405 8942 SUDHL4_400M_050219_1,8951 SUDHL4_400M_050219_1,8951,SLEPEASILAS False False ATIDPDTISAL 48.383132 558.792834460735 1262329.25 8942.0 nc|ENSG00000166478|P52747-3|ZNF143;;nc|ENSG00000166478|P52747-2|ZNF143;;ENSG00000166478|ENST00000396602|ZNF143 4.110948165257772 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8952 48.394 651.0 261210.0 25 0 31260.0 + 11792 GLLQQPPAL 9 145 468.7792782813852 935.5440036295704 2 468.7794982790947 MULTI CID FTMS 0 0 0 8942 167449.875 1.0 0 0.0 10 Unmodified _GLLQQPPAL_ ENSG00000112242|ENST00000346618|E2F3 63.562846038646086 0.0241094678104353 5 {[VA]|[{I|L}G]}AQVAPPA{I|L} 10 3 + 64.988 0.0 0.0 6.9466 6.9466 85.85 0.0 0.0 0.0 10.223703006718594 48.53462798369996 10.223703006718594 2.588092430344737 0 1.242992819099939 1.5228787452803376 0.0 0.6237125054200234 {[VA]|[{I|L}G]}AQVAPPA{I|L};{[VA]|[{I|L}G]}AQG{I|L}PPA{I|L};{[VA]|[{I|L}G]}AG{I|L}QPPA{I|L};{[VA]|[{I|L}G]}{I|L}QGAPPA{I|L};{[VA]|[{I|L}G]}AG{I|L}GAPPA{I|L};{[VA]|[{I|L}G]}Q{I|L}GAPPA{I|L};{[VA]|[{I|L}G]}{I|L}QQPPA{I|L};{[VA]|[{I|L}G]}AGAVAPPA{I|L};{[VA]|[{I|L}G]}QAVAPPA{I|L};{[VA]|[{I|L}G]}Q{I|L}QPPA{I|L} 6.9466;6.6699;6.6045;6.4654;6.4239;6.3618;6.2771;6.2356;6.1994;6.1736 -;-;-;-;-;-;+;-;-;- + 1381 1 1.879 131436.5 1.0 4545 4405 8942 SUDHL4_400M_050219_1,8952 SUDHL4_400M_050219_1,8952,GLLQQPPAL True True GLLQQPPAL 48.394467 468.779498279095 885583.5625 8942.0 ENSG00000112242|ENST00000346618|E2F3 6.951131343841553 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8953 48.408 800.0 243670.0 25 0 19378.0 + + 23926 NLMDDIERA 9 174 538.8428958415129 0 538.8427612185478 PEAK CID FTMS 0 0 0 8942 149858.859375 1.0 0 0.0 11 Unmodified _LVPLVILFY_ nc|ENSG00000156261|P50990-3|CCT8;ENST00000413611.2_1_1:146675128-146675437:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8 14.581692164780916 0.2597149829103905 5 MDD{I|L}N 5 -1 29.231 0.0 0.0 2.7175 0.0 0.0 227.30158562546063 257.1300142877563 484.4315999132169 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.6747425010840047 MDD{I|L}N 2.7175 - 520 + 1 1.879 148814.0 0.6100000143051147 4546 4405 8942 SUDHL4_400M_050219_1,8953 SUDHL4_400M_050219_1,8953,LVPLVILFY False False NLMDDIERA 48.408298 538.842761218548 815631.375 8942.0 nc|ENSG00000156261|P50990-3|CCT8;;ENST00000413611.2_1_1:146675128-146675437:-|nuORF;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 5.718282858530681 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8954 48.424 800.0 193280.0 25 0 21334.0 + -1 KMWEEAISL 9 164 561.778845259247 1121.5431375852938 2 561.7798950076103 MULTI CID FTMS 0 0 0 8942 156382.15625 1.0 0 0.0 12 Oxidation (M) _KM(Oxidation (M))WEEAISL_ ENST00000523351.5_1_5:169188379-169509859:+|nuORF;ENSG00000134516|ENST00000520908|DOCK2 41.95555342248728 0.0647214845423414 5 [W{M(Oxidation (M))|F}]EKEA{I|L}S{I|L} 9 -1 + 60.046 0.0 0.0 5.3539 5.3539 78.898 0.0 0.0 0.0 0.4698372174895127 16.478174818886373 0.4698372174895127 0.4698372174895127 0 0.8494850021680094 0.0 0.9489700043360187 0.0 [W{M(Oxidation (M))|F}]EKEA{I|L}S{I|L};[WE]EAG{M(Oxidation (M))|F}A{I|L}S{I|L};[WE]AEG{M(Oxidation (M))|F}A{I|L}S{I|L};[WE]{M(Oxidation (M))|F}KEA{I|L}S{I|L};[WE]EA{M(Oxidation (M))|F}K{I|L}S{I|L};[WE]AW{M(Oxidation (M))|F}A{I|L}S{I|L};{[CP]|[EA]}WEG{M(Oxidation (M))|F}A{I|L}S{I|L};[WE]AE{M(Oxidation (M))|F}K{I|L}S{I|L};[W{M(Oxidation (M))|F}]EKAE{I|L}S{I|L};{[CP]|[EA]}EWG{M(Oxidation (M))|F}A{I|L}S{I|L} 5.3539;5.312;5.0436;4.9285;4.9116;4.7296;4.6638;4.6432;4.5487;4.5068 -;-;-;-;-;-;-;-;-;- 1869 1 1.879 115027.5 0.5600000023841858 4547 4405 8942 SUDHL4_400M_050219_1,8954 SUDHL4_400M_050219_1,8954,KMWEEAISL False False KMWEEAISL 48.423594 561.77989500761 1603132.125 8942.0 ENST00000523351.5_1_5:169188379-169509859:+|nuORF;;ENSG00000134516|ENST00000520908|DOCK2 3.3765358924865723 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8955 48.427 184.0 447880.0 25 0 39249.0 + + -1 SLFNGSHYL 9 111 519.2593287089297 1036.5041044846594 2 519.2562133669853 MULTI CID FTMS 0 0 0 8942 142573.5625 0.4081253035319422 -4 0.4662399291992187 13 Carbamidomethyl (C) _LSFNGNLC(Carbamidomethyl (C))L_ nc|ENSG00000064933|P54277-3|PMS1;ENSG00000064933|ENST00000441310|PMS1 21.74664581756881 0.2544899275067181 5 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}N[SG]HY{I|L} 9 -1 + 45.556 0.0 0.0 4.3952 4.3952 85.225 0.0 0.0 0.0 31.57698754585809 5.863650028014433 5.863650028014433 9.208187539523747 0 0.0 2.0 0.0 0.3494850021680094 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}N[SG]HY{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}N[SG]{[QD]|[EN]|[WG]|[KD]|[RS]}G{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EEHY{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}GG[SG]HY{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EE{[QD]|[EN]|[WG]|[KD]|[RS]}G{I|L};{[{M(Oxidation (M))|F}D]|MM}[KA][SG]HY{I|L};{[NV]|[RG]}[{M(Oxidation (M))|F}T][SG]HY{I|L} 4.3952;3.5068;3.433;3.1696;2.8766;0.14954;0.029004 -;-;-;-;-;-;- 257 + 1 1.879 66057.1 1.0 4548 4405 8942 SUDHL4_400M_050219_1,8955 SUDHL4_400M_050219_1,8955,LSFNGNLCL False False SLFNGSHYL 48.42716 519.256213366985 548556.5 8942.0 nc|ENSG00000064933|P54277-3|PMS1;;ENSG00000064933|ENST00000441310|PMS1 6.074197133382161 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8956 48.438 643.0 191270.0 25 0 18565.0 + 11917 GLYQDPVTL 9 156 503.26645291862746 1004.518352904055 2 503.2667419314384 MULTI CID FTMS 0 0 0 8942 114965.6796875 1.0 0 0.0 14 Unmodified _GLYQDPVTL_ ENSG00000141569|ENST00000269383|TRIM65 19.438996006549623 0.310492472477042 5 T{I|L} 2 7 14.733 0.0 0.0 1.4667 0.0 0.0 772.3755591802253 0.0 772.3755591802253 0.0 1.238411327490807 0.0 0.0 0 0.0 0.0 0.2215141619232908 0.0 + T{I|L} 1.4667 + + 223 + 1 1.879 100044.0 1.0 4549 4405 8942 SUDHL4_400M_050219_1,8956 SUDHL4_400M_050219_1,8956,GLYQDPVTL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8957 48.453 800.0 148680.0 25 0 31966.0 22758 LQMVLQRRKFL 11 113 716.4356607231713 0 716.4351684451103 PEAK CID FTMS 0 0 0 8942 86529.3828125 0.6144632207310916 -4 0.4662399291992187 15 Unmodified _LQMVLQRRKFL_ ENSG00000095596|ENST00000224356|CYP26A1 2.735195868890462 0.4761840153648598 5 S 1 11 7.232 0.0 0.0 0.50543 0.0 0.0 733.4571235930238 607.3455904596311 1340.802714052655 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 S 0.50543 - 18 + 1 1.879 95007.2 0.449999988079071 4550 4405 8942 SUDHL4_400M_050219_1,8957 SUDHL4_400M_050219_1,8957,LQMVLQRRKFL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8958 48.463 569.0 184170.0 25 0 20824.0 + 12082 GQFPGHNEFF 10 137 590.2642140919137 1178.5138752506273 2 590.2643310427666 MULTI CID FTMS 0 0 0 8942 85722.921875 1.0 0 0.0 16 Unmodified _GQFPGHNEFF_ ENSG00000163171|ENST00000295324|CDC42EP3 40.23920728925047 0.1550410903091231 5 {[QG]|[NA]}{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 10 4 + 35.352 0.0 0.0 2.9997 2.9997 76.153 0.0 0.0 0.0 5.464752771404733 16.300887149282058 5.464752771404733 3.0546218740408904 0 1.4489700043360187 0.6989700043360187 0.2742275032520141 0.6747425010840047 {[QG]|[NA]}{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QG]|[NA]}[WY]{[SA]|[TG]}GP[WQ];{[QG]|[NA]}{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}{[SA]|[TG]}GP[WQ];{[QG]|[NA]}{M(Oxidation (M))|F}Q[MT]GP[WQ];{[QG]|[NA]}{M(Oxidation (M))|F}PGC[KQ][WE];{[QG]|[NA]}[WY]{M(Oxidation (M))|F}{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QG]|[NA]}[WY]{[QS]|[NT]}P[WQ];{[QG]|[NA]}{M(Oxidation (M))|F}{[DS]|[MA]|[CV]|TT}{[QS]|[NT]}P[WQ];{[QG]|[NA]}{M(Oxidation (M))|F}[WY]{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QG]|[NA]}{M(Oxidation (M))|F}PC(Carbamidomethyl (C))[KQ][WE] 2.9997;2.7405;2.6117;2.4964;2.4542;2.4488;2.4417;2.3092;2.2128;2.1554 -;-;-;-;-;-;-;-;-;- 1199 1 1.879 82068.6 1.0 4551 4405 8942 SUDHL4_400M_050219_1,8958 SUDHL4_400M_050219_1,8958,GQFPGHNEFF False True GQFPGHNEFF 48.463333 590.264331042767 814905.9375 8942.0 ENSG00000163171|ENST00000295324|CDC42EP3 7.215985774993896 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8959 48.477 800.0 98714.0 25 0 6117.3 + 40712 VLGTVLVG 8 111 757.4817995899268 756.4745231233268 1 757.4817993044853 MULTI CID FTMS 0 0 0 8942 170851.71875 0.3001036343945429 1 -0.14947509765625 17 Unmodified _VLGTVLVG_ ENST00000229340.9_1_12:120533319-120533514:-|nuORF 52.69307289633392 0.1265801145616722 5 E{I|L}V{I|L}R 5 5 47.562 0.0 0.0 6.2873 0.0 0.0 128.09546096015782 0.0 128.09546096015782 0.0 15.392622513950036 0.0 0.0 0 0.6643943297944485 0.0 1.8494850021680087 0.0 E{I|L}V{I|L}R 6.2873 - 411 1 1.879 71554.7 0.800000011920929 4552 4405 8942 SUDHL4_400M_050219_1,8959 SUDHL4_400M_050219_1,8959,VLGTVLVG True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8961 48.482 32.0 1578600.0 25 0 352170.0 + 37746 TLREKKEK 8 64 516.3140801822988 1030.6136074313974 2 516.3144409060478 MULTI CID FTMS 0 0 0 8960 1506497.25 0.4754972490390219 1 -0.1095123291015625 1 Unmodified _TLREKKEK_ REV__ENSG00000072501|ENST00000322213|SMC1A 0.7936320650641473 0.8195151834710337 5 P 1 -1 0.71334 0.0 0.0 0.069215 0.0 0.0 810.4817237417475 120.05072961978748 930.532453361535 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.069215 - 1 + 1 1.9 44696.5 1.0 4553 4406 8960 SUDHL4_400M_050219_1,8961 SUDHL4_400M_050219_1,8961,TLREKKEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8962 48.483 45.0 1054700.0 25 0 231860.0 38538 TSSKGKKGKK 10 53 524.8271347842657 1047.6397166353313 2 524.8276244997978 MULTI CID FTMS 0 0 0 8960 898680.3125 0.427345536193208 1 -0.1095123291015625 2 Unmodified _TSSKGKKGKK_ ENSG00000135837|ENST00000367607|CEP350 0.0 0.726636491536033 5 P 1 10 0.9691 0.0 0.0 0.092503 0.0 0.0 849.5213369740017 98.03795038394765 947.5592873579492 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.092503 - 2 + 1 1.9 44285.9 1.0 4554 4406 8960 SUDHL4_400M_050219_1,8962 SUDHL4_400M_050219_1,8962,TSSKGKKGKK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8963 48.485 57.0 960110.0 25 0 180700.0 + 16207 IVIYVGVFLTW 11 76 655.3822954869948 1308.7500380407896 2 655.3826782107353 MULTI CID FTMS 0 0 0 8960 814933.25 0.5147099494240264 2 -0.2011528015136718 3 Unmodified _IVIYVGVFLTW_ REV__ENSG00000198695|ENST00000361681|MT-ND6 9.38312468134398 0.8308777417566128 5 T{I|L}W 3 -1 15.106 0.0 0.0 1.1542 0.0 0.0 890.5295890099364 0.0 890.5295890099364 0.0 2.8246091534035163 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 T{I|L}W 1.1542 - 187 + 1 1.9 57402.5 1.0 4555 4406 8960 SUDHL4_400M_050219_1,8963 SUDHL4_400M_050219_1,8963,IVIYVGVFLTW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8964 48.487 131.0 325010.0 25 0 87812.0 + 1938 AMKKLLIIFSY 11 70 663.8955472668355 1325.7765416004709 2 663.8960449099541 MULTI CID FTMS 0 0 0 8960 355035.53125 0.3326424568574289 2 -0.2011528015136718 4 Unmodified _AMKKLLIIFSY_ REV__ENSG00000188869|ENST00000359440|TMC3;REV__ENST00000559982.1_1_15:81630174-81666445:-|nuORF;REV__nc|ENSG00000188869|Q7Z5M5-2|TMC3 1.1933415558491238 0.8695176722560516 5 T 1 -1 3.9794 0.0 0.0 0.30016 0.0 0.0 378.52808076238335 843.1792086236936 1221.707289386077 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.30016 - 3 + 1 1.9 46994.5 1.0 4556 4406 8960 SUDHL4_400M_050219_1,8964 SUDHL4_400M_050219_1,8964,AMKKLLIIFSY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8965 48.491 156.0 153300.0 25 0 12276.0 + 25324 NAIIIRVGPL 10 55 533.3403791018357 1064.6662052704712 2 533.3406860232353 MULTI CID FTMS 0 0 0 8960 276323.46875 0.4039193421263842 1 -0.1095123291015625 5 Unmodified _NAIIIRVGPL_ REV__ENSG00000151240|ENST00000280886|DIP2C 3.944395688203298 0.708391353636983 5 {I|L} 1 -1 12.474 0.0 0.0 1.1717 0.0 0.0 933.571385179454 0.0 933.571385179454 0.0 1.054266826574466 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1717 + + 30 + 1 1.9 25167.3 1.0 4557 4406 8960 SUDHL4_400M_050219_1,8965 SUDHL4_400M_050219_1,8965,NAIIIRVGPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8966 48.494 202.0 394110.0 25 0 40103.0 + + 40016 KLIDGQVIQL 10 92 563.8447629590861 1125.674972984972 2 563.8453246951103 MULTI CID FTMS 0 0 0 8960 272828.90625 1.0 0 0.0 6 Unmodified _VGEQVKILQL_ nc|ENSG00000166478|P52747-3|ZNF143;nc|ENSG00000166478|P52747-2|ZNF143;ENSG00000166478|ENST00000396602|ZNF143 55.50274090549119 0.048383292844968 5 {[QG]|[NA]}DV{I|L}{I|L}K{I|L}Q{I|L} 10 -1 + 68.946 0.0 0.0 6.1248 6.1248 83.853 0.0 0.0 0.0 2.0630238535714938 54.96639837922589 2.0630238535714938 2.687592506070345 0 0.6861818737241735 0.0 0.7059771852360797 0.7302046884880937 {[QG]|[NA]}DV{I|L}{I|L}K{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[NG]V{I|L}K{I|L}Q{I|L};[Q{I|L}][DG]V{I|L}K{I|L}Q{I|L};{[QG]|[NA]}D{I|L}V{I|L}K{I|L}Q{I|L};{[QG]|[NA]}VD{I|L}{I|L}K{I|L}Q{I|L};{[QG]|[NA]}VEV{I|L}K{I|L}Q{I|L};{[QG]|[NA]}DV{I|L}{I|L}K{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[NG]V{I|L}K{I|L}[AG]{I|L};[Q{I|L}][DG]V{I|L}K{I|L}[AG]{I|L};{[QG]|[NA]}D{I|L}V{I|L}K{I|L}[AG]{I|L} 6.1248;5.8861;5.8646;5.8574;5.59;5.3226;5.3107;5.0719;5.0504;5.0433 -;-;-;-;-;-;-;-;-;- 351 1 1.9 64523.0 1.0 4558 4406 8960 SUDHL4_400M_050219_1,8966 SUDHL4_400M_050219_1,8966,VGEQVKILQL False False KLIDGQVIQL 48.494429 563.84532469511 1850746.375 8960.0 nc|ENSG00000166478|P52747-3|ZNF143;;nc|ENSG00000166478|P52747-2|ZNF143;;ENSG00000166478|ENST00000396602|ZNF143 3.9899990558624263 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8967 48.497 109.0 380220.0 25 0 28704.0 + 31193 RLQDELVTL 9 69 543.8118266283321 1085.6091003234642 2 543.8130370974541 MULTI CID FTMS 0 0 0 8960 271710.4375 0.7695217579087484 1 -0.1095123291015625 7 Unmodified _RLQDELVTL_ ENSG00000127603|ENST00000564288|MACF1;ENST00000484393.1_1_1:39751227-39753267:+|nuORF;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1 19.361941925380144 0.3125782356748823 5 [{I|L}T]V[R{I|L}]NEE{I|L} 9 7 + 55.697 0.0 0.0 5.1304 5.1304 87.39 0.0 0.0 0.0 8.753246544333777 29.934691960977275 8.753246544333777 9.208187539523747 0 0.3807196863200844 1.6989700043360187 0.0 0.3807196863200844 [{I|L}T]V[R{I|L}]NEE{I|L};[{I|L}T]V[R{I|L}]GGEE{I|L};{[TV]|[{I|L}S]}{I|L}[R{I|L}]NEE{I|L};{[TV]|[{I|L}S]}{I|L}[R{I|L}]GGEE{I|L} 5.1304;4.2822;4.1835;3.3353 -;-;-;- 102 1 1.9 41352.4 1.0 4559 4406 8960 SUDHL4_400M_050219_1,8967 SUDHL4_400M_050219_1,8967,RLQDELVTL False True RLQDELVTL 48.496745 543.813037097454 3364865.25 8960.0 ENSG00000127603|ENST00000564288|MACF1;;ENST00000484393.1_1_1:39751227-39753267:+|nuORF;;nc|ENSG00000127603|Q9UPN3-2|MACF1;;nc|ENSG00000127603|Q9UPN3|MACF1;;nc|ENSG00000127603|Q9UPN3-3|MACF1;;nc|ENSG00000127603|Q9UPN3-4|MACF1 4.516784191131592 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8968 48.501 196.0 530080.0 25 0 68291.0 + 17088 KLETHRSHLV 10 91 610.3482302549686 1218.681907576737 2 610.3485595583916 MULTI CID FTMS 0 0 0 8960 255564.265625 0.6710500835565638 -2 0.327117919921875 8 Unmodified _KLETHRSHLV_ REV__ENSG00000163956|ENST00000650182|LRPAP1;REV__ENST00000296325.9_1_4:3514703-3533784:-|nuORF;REV__ENST00000515119.5_1_4:3517776-3534065:-|nuORF 2.9952420565917617 0.7127817445270067 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.9 79597.2 1.0 4560 4406 8960 SUDHL4_400M_050219_1,8968 SUDHL4_400M_050219_1,8968,KLETHRSHLV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8969 48.507 351.0 264160.0 25 0 25076.0 -1 0 77 626.3630170060376 625.3557405394375 1 626.3611938357353 MULTI CID FTMS 0 0 0 8960 215830.09375 0.4960591792161108 -2 0.327117919921875 9 5 M 1 -1 1.9897 0.0 0.0 0.31817 0.0 0.0 53.02610294353753 438.2650240533813 491.2911269969188 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.31817 - 3 + 1 1.9 73839.8 1.0 4561 4406 8960 SUDHL4_400M_050219_1,8969 SUDHL4_400M_050219_1,8969, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 8970 48.51 139.0 365800.0 25 0 31038.0 23882 LVLKYREDII 10 75 421.255685966776 1260.745228500528 3 421.2560302615166 MULTI CID FTMS 0 0 0 8960 208482.6875 0.2852242021887645 1 -0.1095123291015625 10 Unmodified _LVLKYREDII_ ENSG00000029725|ENST00000537505|RABEP1;ENST00000575475.2_1_17:5185712-5281605:+|nuORF;nc|ENSG00000029725|Q15276-2|RABEP1 9.38312468134398 0.6832340498775793 5 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 8 + 85.438 0.0 0.0 6.7768 6.7768 91.156 0.0 0.0 0.0 70.19022384486365 17.769250191953674 17.769250191953674 9.164539485499247 0 0.3054621874040891 2.0 0.0 0.4247425010840047 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR 6.7768;6.0499 -;- 92 + 1 1.9 51118.3 1.0 4562 4406 8960 SUDHL4_400M_050219_1,8970 SUDHL4_400M_050219_1,8970,LVLKYREDII False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8971 48.516 380.0 376830.0 25 0 97757.0 + 8868 FADFERHFL 9 125 394.5288869641138 1180.564831492541 3 394.5293762087822 MULTI CID FTMS 0 0 0 8960 215418.875 1.0 0 0.0 11 Unmodified _FADFERHFL_ ENSG00000079616|ENST00000160827|KIF22;ENST00000563666.1_1_16:29810259-29810893:+|nuORF;nc|ENSG00000079616|Q14807-2|KIF22 18.721224879955976 0.3299216912490967 5 {M(Oxidation (M))|F}AD{M(Oxidation (M))|F}E[RH]{M(Oxidation (M))|F}{I|L} 9 0 + 41.588 0.0 0.0 3.5227 3.5227 75.713 0.0 0.0 0.0 9.66332011622869 2.1670910996394426 2.1670910996394426 1.9188552623891293 0 0.7059771852360797 0.0 0.0 0.0 + + {M(Oxidation (M))|F}AD{M(Oxidation (M))|F}E[RH]{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}AD{M(Oxidation (M))|F}E[VP]P{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}AD{M(Oxidation (M))|F}E[RH]{I|L}{M(Oxidation (M))|F};{M(Oxidation (M))|F}AD{M(Oxidation (M))|F}E[VP]P{I|L}{M(Oxidation (M))|F};{M(Oxidation (M))|F}W{M(Oxidation (M))|F}E[RH]{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}W{M(Oxidation (M))|F}E[VP]P{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}W{M(Oxidation (M))|F}E[RH]{I|L}{M(Oxidation (M))|F};{M(Oxidation (M))|F}W{M(Oxidation (M))|F}E[VP]P{I|L}{M(Oxidation (M))|F};{M(Oxidation (M))|F}{I|L}[HV]D[YQ]{M(Oxidation (M))|F}{I|L};{M(Oxidation (M))|F}{I|L}A{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Y{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L} 3.5227;3.3602;3.3392;3.1766;2.9535;2.7864;2.7699;2.6028;2.4914;2.4206 +;-;-;-;-;-;-;-;-;- + 372 + 1 1.9 115575.8 1.0 4563 4406 8960 SUDHL4_400M_050219_1,8971 SUDHL4_400M_050219_1,8971,FADFERHFL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8972 48.524 411.0 261320.0 25 0 27908.0 -1 SINSCYPEEI 10 127 606.2671107889431 1210.519668644686 2 606.2682372927666 MULTI CID FTMS 0 0 0 8960 207754.96875 0.8803503043015366 -1 0.14947509765625 12 Carbamidomethyl (C) _SINSC(Carbamidomethyl (C))YPEEI_ ENSG00000077327|ENST00000376624|SPAG6;nc|ENSG00000077327|O75602-3|SPAG6;nc|ENSG00000077327|O75602-4|SPAG6;nc|ENSG00000077327|O75602-5|SPAG6 22.736283301280096 0.4578556481593033 5 E{M(Oxidation (M))|F}QAE{I|L} 6 -1 31.674 0.0 0.0 2.6166 0.0 0.0 475.1552906720719 0.0 475.1552906720719 0.0 14.209865103221295 0.0 0.0 0 0.6989700043360187 0.0 0.7059771852360797 0.0 E{M(Oxidation (M))|F}QAE{I|L} 2.6166 - 409 1 1.9 79479.6 1.0 4564 4406 8960 SUDHL4_400M_050219_1,8972 SUDHL4_400M_050219_1,8972,SINSCYPEEI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8973 48.528 252.0 130180.0 25 0 24948.0 39830 VEWIVFRRPVP 11 69 466.6082079137356 1396.8027943414068 3 466.6081725955009 MULTI CID FTMS 0 0 0 8960 186217.75 1.0 0 0.0 13 Unmodified _VEWIVFRRPVP_ ENSG00000144724|ENST00000474889|PTPRG;nc|ENSG00000144724|P23470-2|PTPRG 1.4819007175156935 0.86815623132643 5 {I|L} 1 10 11.109 0.0 0.0 0.79533 0.0 0.0 1265.7077301097645 0.0 1265.7077301097645 0.0 11.10924374808178 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.79533 + + 13 + 1 1.9 35169.1 1.0 4565 4406 8960 SUDHL4_400M_050219_1,8973 SUDHL4_400M_050219_1,8973,VEWIVFRRPVP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8974 48.538 546.0 509370.0 25 0 36630.0 + 31298 RLYPEGLAQL 10 146 580.3271007898812 1158.6396486465624 2 580.3290893435478 MULTI CID FTMS 0 0 0 8960 140547.75 0.062292824842005 -2 0.327117919921875 14 Unmodified _RLYPEGLAQL_ ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF 60.94344597037026 0.0341113498090871 5 [R{I|L}]YPEG{I|L}AQ{I|L} 10 0 + 86.776 0.0 0.0 7.4895 7.4895 92.503 0.0 0.0 0.0 19.628618393527404 65.78508689054182 19.628618393527404 9.164539485499247 0 1.579689690656103 0.8239087409443188 0.6989700043360187 0.7614393726401688 + + [R{I|L}]YPEG{I|L}AQ{I|L};[R{I|L}]YPEG{I|L}A[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[PG][YV]G{I|L}AQ{I|L};[R{I|L}]YPT[TP]AQ{I|L};[VP][HV]PEG{I|L}AQ{I|L};[QA]{I|L}[TA][KC]{I|L}AQ{I|L};[AG]{I|L}A[TA][KC]{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}[PG][YR]{I|L}AQ{I|L};{[VA]|[{I|L}G]}AA[TA][KC]{I|L}AQ{I|L};[EP]G{I|L}[YR]{I|L}AQ{I|L} 7.4895;6.6985;5.6103;5.5695;5.4139;5.171;5.0832;5.0428;5.0282;4.8405 +;-;-;-;-;-;-;-;-;- + 1385 1 1.9 206985.3 1.0 4566 4406 8960 SUDHL4_400M_050219_1,8974 SUDHL4_400M_050219_1,8974,RLYPEGLAQL True True RLYPEGLAQL 48.538085 580.329089343548 34075324.0 8960.0 ENST00000563305.1_1_16:67472744-67473248:-|nuORF;;ENSG00000159720|ENST00000290949|ATP6V0D1 7.036954561869304 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8975 48.546 428.0 274410.0 25 0 25631.0 + 33524 SILEDPPSI 9 123 485.757749146479 969.500945359758 2 485.7587463259697 MULTI CID FTMS 0 0 0 8960 139250.75 0.31456195894805 6 -0.7813949584960938 15 Unmodified _SILEDPPSI_ ENSG00000064102|ENST00000261191|INTS13;nc|ENSG00000064102|Q9NVM9-2|INTS13 61.357469665136826 0.0253304979873734 5 DPPS{I|L} 5 4 39.201 0.0 0.0 4.0434 0.0 0.0 442.2429630372955 0.0 442.2429630372955 0.0 18.31962260379983 0.0 0.0 0 0.8807196863200843 0.0 1.1237125054200234 0.0 + DPPS{I|L} 4.0434 + + 483 + 1 1.9 91593.0 1.0 4567 4406 8960 SUDHL4_400M_050219_1,8975 SUDHL4_400M_050219_1,8975,SILEDPPSI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8976 48.555 428.0 139710.0 25 0 37449.0 9098 FFIRLASLCKR 11 78 677.3953084722584 1352.7760640113167 2 677.3957397341728 MULTI CID FTMS 0 0 0 8960 136964.84375 0.1368382256293473 -3 0.3679962158203125 16 Unmodified _FFIRLASLCKR_ ENST00000359039.4_1_9:21334854-21334980:-|nuORF 2.9952420565917617 0.861016188266951 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 21 1 1.9 59145.6 1.0 4568 4406 8960 SUDHL4_400M_050219_1,8976 SUDHL4_400M_050219_1,8976,FFIRLASLCKR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8977 48.558 207.0 343300.0 25 0 28648.0 + 14965 ILPCIVLTF 9 109 509.8030919967092 1017.5916310602184 2 509.8032714724541 MULTI CID FTMS 0 0 0 8960 120402.2578125 0.5912223132520285 -1 0.14947509765625 17 Unmodified _ILPCIVLTF_ REV__ENSG00000004700|ENST00000444129|RECQL 19.438996006549623 0.310492472477042 5 AV[HA]{[QD]|[EN]|[WG]|[KD]|[RS]}T{M(Oxidation (M))|F} 8 -1 24.174 0.0 0.0 2.3756 0.0 0.0 130.15951543697457 0.0 130.15951543697457 0.0 12.914974649323234 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 AV[HA]{[QD]|[EN]|[WG]|[KD]|[RS]}T{M(Oxidation (M))|F} 2.3756 - 114 + 1 1.9 61283.5 1.0 4569 4406 8960 SUDHL4_400M_050219_1,8977 SUDHL4_400M_050219_1,8977,ILPCIVLTF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8978 48.57 687.0 168550.0 25 0 42766.0 + + 20337 RLQQELMTL 9 106 565.8664885337731 1129.7184241343462 2 565.8668090701103 MULTI CID FTMS 0 0 0 8960 107316.3984375 0.2523484305548605 1 -0.1095123291015625 18 Unmodified _LLFGVVLRTI_ ENSG00000175063|ENST00000356455|UBE2C;nc|ENSG00000175063|O00762-4|UBE2C;ENST00000604665.1_1_19:58379289-58379556:+|nuORF;chr20:45815540-45815854|47|12.17|0.56|4.44|+|ENST00000617055|UBE2C,UBE2C;nc|ENSG00000175063|O00762-3|UBE2C;chr20:45814470-45815390|47|12.11|0.65|4.22|+|ENST00000335046|UBE2C,UBE2C 7.289230182591677 0.6929195370588109 5 {[QN]|[E{I|L}]|[KN]}K{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}M 7 -1 20.246 0.0 0.0 1.7921 0.0 0.0 0.0 228.22461448279788 228.22461448279788 5.680726507867924 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 {[QN]|[E{I|L}]|[KN]}K{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}M 1.7921 - 176 1 1.9 90143.4 1.0 4570 4406 8960 SUDHL4_400M_050219_1,8978 SUDHL4_400M_050219_1,8978,LLFGVVLRTI False False RLQQELMTL 48.570374 565.86680907011 1670954.5 8960.0 ENSG00000175063|ENST00000356455|UBE2C;;nc|ENSG00000175063|O00762-4|UBE2C;;ENST00000604665.1_1_19:58379289-58379556:+|nuORF;;chr20:45815540-45815854|47|12.17|0.56|4.44|+|ENST00000617055|UBE2C,UBE2C;;nc|ENSG00000175063|O00762-3|UBE2C;;chr20:45814470-45815390|47|12.11|0.65|4.22|+|ENST00000335046|UBE2C,UBE2C 4.510636329650879 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8979 48.584 800.0 162640.0 25 0 23992.0 + 8869 FADFERHFL 9 134 591.2904544287428 1180.5663559242855 2 591.2906982302666 MULTI CID FTMS 0 0 0 8960 88664.1171875 1.0 0 0.0 19 Unmodified _FADFERHFL_ ENSG00000079616|ENST00000160827|KIF22;ENST00000563666.1_1_16:29810259-29810893:+|nuORF;nc|ENSG00000079616|Q14807-2|KIF22 37.77132515983256 0.0876909340306915 5 {M(Oxidation (M))|F}AD{M(Oxidation (M))|F}ERH{I|L}{M(Oxidation (M))|F} 9 2 + 69.779 0.0 0.0 5.9107 5.9107 85.617 0.0 0.0 0.0 11.962724883926654 4.771212547196626 4.771212547196626 4.771212547196626 0 1.924742501084005 0.0 0.0 0.0 {M(Oxidation (M))|F}AD{M(Oxidation (M))|F}ERH{I|L}{M(Oxidation (M))|F};{M(Oxidation (M))|F}AD{M(Oxidation (M))|F}ERH{M(Oxidation (M))|F}{I|L};{[WT]|[RM]}KRE{M(Oxidation (M))|F}DAE;{M(Oxidation (M))|F}W{M(Oxidation (M))|F}E[VG]H{I|L}{M(Oxidation (M))|F};{M(Oxidation (M))|F}W{M(Oxidation (M))|F}E[VG]H{M(Oxidation (M))|F}{I|L};[{I|L}A]CKRE{M(Oxidation (M))|F}WE;{[WT]|[RM]}KRE{M(Oxidation (M))|F}WE;[{I|L}A]CKRE{M(Oxidation (M))|F}D{[TV]|[{I|L}S]};[{I|L}A]CK[VG]E{M(Oxidation (M))|F}WE;{[WT]|[RM]}K[VG]E{M(Oxidation (M))|F}WE 5.9107;5.5065;4.3268;4.2176;3.8135;3.4958;3.4182;3.0756;2.7158;2.6337 -;+;-;-;-;-;-;-;-;- + 1105 + 1 1.9 100743.1 0.5299999713897705 4571 4406 8960 SUDHL4_400M_050219_1,8979 SUDHL4_400M_050219_1,8979,FADFERHFL True True FADFERHFL 48.584205 591.290698230267 2208059.25 8960.0 ENSG00000079616|ENST00000160827|KIF22;;ENST00000563666.1_1_16:29810259-29810893:+|nuORF;;nc|ENSG00000079616|Q14807-2|KIF22 7.118120193481445 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8980 48.587 48.0 1392100.0 25 0 566620.0 + 9969 FPGPRQFLP 9 79 529.794729948119 1057.5749069630378 2 530.2976562380791 MULTI CID FTMS 0 0 0 8960 640601.0 0.7348480133983943 -1 0.14947509765625 20 Unmodified _FPGPRQFLP_ REV__ENST00000531184.5_1_8:144641759-144643375:+|nuORF 20.871210003555333 0.2717241269066626 5 [PG]{M(Oxidation (M))|F}P[QT]{I|L}{I|L}W 9 -1 + 39.855 0.0 0.0 3.7686 3.7686 79.387 0.0 0.0 0.0 5.255762612236907 9.05333107397177 5.255762612236907 4.771212547196626 0 0.2742275032520141 1.3979400086720375 0.0 0.0 [PG]{M(Oxidation (M))|F}P[QT]{I|L}{I|L}W;[PG]{M(Oxidation (M))|F}P{I|L}[QT]{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP[QT]{I|L}{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{I|L}[QT]{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP[WR]{I|L}W 3.7686;3.3174;3.2716;2.8204;2.659 -;-;-;-;- 131 1 1.9 55138.2 1.0 4572 4406 8960 SUDHL4_400M_050219_1,8980 SUDHL4_400M_050219_1,8980,FPGPRQFLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8982 48.604 800.0 112910.0 25 0 29432.0 + 35179 SRSRRRRRER 10 94 707.9218640385022 0 707.9218627810478 PEAK CID FTMS 0 0 0 8981 104775.4765625 0.6028448274079543 2 -0.2819862365722656 1 Unmodified _SRSRRRRRER_ REV__ENSG00000116754|ENST00000370949|SRSF11;REV__ENSG00000153914|ENST00000334121|SREK1;REV__ENST00000522214.1_1_5:65470720-65474693:+|nuORF;REV__nc|ENSG00000116754|Q05519-2|SRSF11;REV__nc|ENSG00000153914|Q8WXA9|SREK1 1.4819007175156935 0.3961065659209837 5 C(Carbamidomethyl (C)) 1 -1 3.0989 0.0 0.0 0.21919 0.0 0.0 795.5270033682169 455.2493075006469 1250.776310868864 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.21919 - 14 + 1 1.936 81634.6 0.75 4573 4407 8981 SUDHL4_400M_050219_1,8982 SUDHL4_400M_050219_1,8982,SRSRRRRRER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8983 48.606 41.0 1285700.0 25 0 154700.0 + 30779 RIDPALLTV 9 73 499.30515455970885 996.5957561862176 2 499.3058349490166 MULTI CID FTMS 0 0 0 8981 901488.5 1.0 0 0.0 2 Unmodified _RIDPALLTV_ ENSG00000188211|ENST00000338965|NCR3LG1 21.53697664764585 0.2571576504437394 5 [{M(Oxidation (M))|F}V]{I|L}{I|L}[NP]VPV 9 7 + 37.29 0.0 0.0 3.7418 3.7418 85.049 0.0 0.0 0.0 13.447209416731816 5.686362358410129 5.686362358410129 12.162355562743276 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]{I|L}{I|L}[NP]VPV;{[TV]|[{I|L}S]}{I|L}[NP]{I|L}{I|L}D{I|L};[{I|L}T]V[NP]{I|L}{I|L}D{I|L};[Y{I|L}][Y{I|L}]{I|L}{I|L}TV;[VP][NG][KG]{I|L}{I|L}TV 3.7418;2.5214;2.509;2.1959;1.2507 -;-;-;-;- 79 + 1 1.936 45381.2 1.0 4574 4407 8981 SUDHL4_400M_050219_1,8983 SUDHL4_400M_050219_1,8983,RIDPALLTV False True RIDPALLTV 48.605582 499.305834949017 6271514.0 8981.0 ENSG00000188211|ENST00000338965|NCR3LG1 5.912304401397705 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8984 48.607 47.0 1447600.0 25 0 410480.0 + 18756 ALLKIEGVYA 10 74 538.3219697679343 1074.6293866026683 2 538.8215820193291 MULTI CID FTMS 0 0 0 8981 846023.6875 0.3536587819199727 -1 0.1095123291015625 3 Unmodified _LALVRNRSF_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000485439.5_1_3:197677808-197681048:+|nuORF;ENST00000329092.12_1_3:197677808-197679492:+|nuORF 8.593279151180031 0.6146971463335029 5 [{I|L}A][DV]K{I|L}A{I|L} 8 6 39.672 0.0 0.0 3.6917 0.0 0.0 0.0 248.0887062002544 248.0887062002544 23.474184576165342 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.6307196863200843 0.0 [{I|L}A][DV]K{I|L}A{I|L} 3.6917 - 407 1 1.936 56339.9 1.0 4575 4407 8981 SUDHL4_400M_050219_1,8984 SUDHL4_400M_050219_1,8984,LALVRNRSF False False ALLKIEGVYA 48.60688 538.821582019329 15813376.0 8981.0 ENSG00000182899|ENST00000647248|RPL35A;;ENST00000485439.5_1_3:197677808-197681048:+|nuORF;;ENST00000329092.12_1_3:197677808-197679492:+|nuORF 1.6031019513805709 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8985 48.608 61.0 691690.0 25 0 62198.0 + 40952 VLVDRTIYI 9 72 546.3263112671218 1090.6380696010435 2 546.3268920779228 MULTI CID FTMS 0 0 0 8981 429079.375 1.0 0 0.0 4 Unmodified _VLVDRTIYI_ ENSG00000132541|ENST00000254878|RIDA 29.84058131909904 0.1515068451768857 5 V{I|L}V 3 6 45.93 0.0 0.0 4.2113 0.0 0.0 0.0 776.393600905599 776.393600905599 16.237125054200234 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + V{I|L}V 4.2113 + + 73 + 1 1.936 41674.4 1.0 4576 4407 8981 SUDHL4_400M_050219_1,8985 SUDHL4_400M_050219_1,8985,VLVDRTIYI False True VLVDRTIYI 48.608397 546.326892077923 2771396.75 8981.0 ENSG00000132541|ENST00000254878|RIDA 4.8197933832804365 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8986 48.61 94.0 528050.0 25 0 42911.0 30680 RFPELRRRR 9 69 643.3882277044987 1284.7619024757971 2 643.3882324099541 MULTI CID FTMS 0 0 0 8981 180982.296875 0.8787347985403564 -1 0.1095123291015625 5 Unmodified _RFPELRRRR_ ENST00000264657.9_1_17:40500547-40540577:-|nuORF 7.289230182591677 0.6602208344931196 5 M 1 9 2.2185 0.0 0.0 0.17268 0.0 0.0 678.4249406611474 472.27046823468913 1150.6954088958364 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.17268 - 21 + 1 1.936 43474.2 1.0 4577 4407 8981 SUDHL4_400M_050219_1,8986 SUDHL4_400M_050219_1,8986,RFPELRRRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8987 48.618 422.0 166440.0 25 0 36468.0 + 13402 HLLHPRRHK 9 81 597.3581850424032 1192.7018171516063 2 597.3591796755791 MULTI CID FTMS 0 0 0 8981 184768.3125 0.4825993332104644 -1 0.1095123291015625 6 Unmodified _HLLHPRRHK_ REV__ENSG00000143669|ENST00000389793|LYST;REV__ENST00000465349.5_1_1:235954948-235996891:-|nuORF;REV__ENST00000489585.5_1_1:235926109-235996891:-|nuORF;REV__nc|ENSG00000143669|Q99698-2|LYST;REV__nc|ENSG00000143669|Q99698-3|LYST 0.6014990680409731 0.8936861360942873 5 {I|L} 1 -1 8.8735 0.0 0.0 0.74398 0.0 0.0 1061.6071191309015 0.0 1061.6071191309015 0.0 8.388903526330402 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.74398 + + 3 + 1 1.936 58810.9 1.0 4578 4407 8981 SUDHL4_400M_050219_1,8987 SUDHL4_400M_050219_1,8987,HLLHPRRHK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8988 48.621 174.0 472860.0 25 0 66385.0 1613 ALLSAALALY 10 105 503.3031260380504 0 503.3031188845634 PEAK CID FTMS 0 0 0 8981 186137.59375 1.0 0 0.0 7 Unmodified _ALLSAALALY_ nc|ENSG00000213995|Q8IW45-2|NAXD;nc|ENSG00000213995|Q8IW45|NAXD 25.399314129420983 0.2547831343944559 5 A{I|L}VGE 5 8 14.157 0.0 0.0 1.4092 0.0 0.0 294.16092629309463 238.15621362857652 532.3171399216712 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L}VGE 1.4092 - 177 + 1 1.936 66022.0 1.0 4579 4407 8981 SUDHL4_400M_050219_1,8988 SUDHL4_400M_050219_1,8988,ALLSAALALY False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 8989 48.625 168.0 274050.0 25 0 25267.0 + 29060 QEITVQQL 8 85 479.7639045208536 0 479.7639953494072 PEAK CID FTMS 0 0 0 8981 165568.421875 0.7151283307770007 -1 0.1095123291015625 8 Unmodified _QEITVQQL_ ENSG00000137500|ENST00000529689|CCDC90B;ENST00000526631.1_1_11:82985654-82997015:-|nuORF;nc|ENSG00000137500|Q9GZT6-2|CCDC90B;nc|ENSG00000137500|Q9GZT6-3|CCDC90B 30.22481116460888 0.2280668331718824 5 SS 2 8 9.3804 0.0 0.0 0.97966 0.0 0.0 698.360071149326 82.0669420831664 780.4270132324924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 SS 0.97966 - 89 + 1 1.936 42122.1 1.0 4580 4407 8981 SUDHL4_400M_050219_1,8989 SUDHL4_400M_050219_1,8989,QEITVQQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8990 48.628 189.0 193440.0 25 0 46287.0 + 16855 KIEIREVKIGW 11 62 685.9088898580812 0 685.9082519412041 PEAK CID FTMS 0 0 0 8981 166261.1875 0.2083472711672653 -2 0.2589874267578125 9 Unmodified _KIEIREVKIGW_ REV__ENSG00000116218|ENST00000367615|NPHS2;REV__nc|ENSG00000116218|Q9NP85-2|NPHS2 1.1933415558491238 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.936 40017.9 1.0 4581 4407 8981 SUDHL4_400M_050219_1,8990 SUDHL4_400M_050219_1,8990,KIEIREVKIGW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8991 48.632 163.0 162250.0 25 0 28856.0 + 19124 LDWKKKRKLE 10 53 672.4092426983802 1342.8039324635604 2 672.4095947146416 MULTI CID FTMS 0 0 0 8981 149418.984375 0.1963126866063833 3 -0.4029350280761719 10 Unmodified _LDWKKKRKLE_ REV__ENSG00000150337|ENST00000369168|FCGR1A;REV__nc|ENSG00000150337|P12314-2|FCGR1A 6.723162845929126 0.6955379296933136 5 {[TV]|[{I|L}S]}{I|L}V 4 -1 19.882 0.0 0.0 1.4807 0.0 0.0 0.0 927.5111827899854 927.5111827899854 9.424712680444356 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.9247425010840048 0.0 {[TV]|[{I|L}S]}{I|L}V 1.4807 - 45 1 1.936 30836.6 1.0 4582 4407 8981 SUDHL4_400M_050219_1,8991 SUDHL4_400M_050219_1,8991,LDWKKKRKLE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8992 48.639 433.0 292960.0 25 0 43069.0 + 12650 GVLDTLTKV 9 124 473.2843876480496 0 473.2848083376884 PEAK CID FTMS 0 0 0 8981 144244.421875 0.4660004399715018 -1 0.1095123291015625 11 Unmodified _GVLDTLTKV_ ENSG00000214114|ENST00000397572|MYCBP;ENST00000495043.5_1_1:39330344-39338774:-|nuORF 60.07390631473393 0.0167981024283326 5 {I|L}DT{I|L}TK 6 3 39.058 0.0 0.0 4.1351 0.0 0.0 156.09133329466596 114.05651270084218 270.14784599550813 0.0 0.0 0.0 0.0 0 0.9698565171985376 0.0 0.8494850021680094 0.25 + {I|L}DT{I|L}TK 4.1351 + + 236 + 1 1.936 102034.9 1.0 4583 4407 8981 SUDHL4_400M_050219_1,8992 SUDHL4_400M_050219_1,8992,GVLDTLTKV True True GVLDTLTKV 48.639222 473.284808337688 1786375.75 8981.0 ENSG00000214114|ENST00000397572|MYCBP;;ENST00000495043.5_1_1:39330344-39338774:-|nuORF 5.89769967397054 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8993 48.646 404.0 271390.0 25 0 30171.0 20197 LLAKSYEVKSV 11 98 618.861783680804 1235.709014428408 2 618.8614379763603 MULTI CID FTMS 0 0 0 8981 133439.859375 0.8951794808365273 -1 0.1095123291015625 12 Unmodified _LLAKSYEVKSV_ ENST00000518060.5_2_8:48644710-48648009:+|nuORF 5.731851221503515 0.8481046878870278 5 [{M(Oxidation (M))|F}V]{I|L} 3 10 3.3008 0.0 0.0 0.26711 0.0 0.0 0.0 873.4642383876454 873.4642383876454 2.816206019771532 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [{M(Oxidation (M))|F}V]{I|L} 0.26711 - 34 1 1.936 86953.3 1.0 4584 4407 8981 SUDHL4_400M_050219_1,8993 SUDHL4_400M_050219_1,8993,LLAKSYEVKSV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 8994 48.661 800.0 159740.0 25 0 19550.0 + 23958 LVRYPRLSPY 10 134 632.3613484730581 1262.708144012916 2 632.3606445193291 MULTI CID FTMS 0 0 0 8981 112357.5625 0.2565757196742124 3 -0.4029350280761719 13 Unmodified _LVRYPRLSPY_ REV__ENSG00000206530|ENST00000393845|CFAP44;REV__nc|ENSG00000206530|Q96MT7-1|CFAP44 7.289230182591677 0.6929195370588109 5 {I|L} 1 -1 10.596 0.0 0.0 0.83914 0.0 0.0 1131.613110298852 0.0 1131.613110298852 0.0 -2.5916555876480807 -2.5916555876480807 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.83914 + + 299 + 1 1.936 104095.8 0.6600000262260437 4585 4407 8981 SUDHL4_400M_050219_1,8994 SUDHL4_400M_050219_1,8994,LVRYPRLSPY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8995 48.675 800.0 203040.0 25 0 39167.0 + 20522 LLLQLLFQWLT 11 153 694.4220137590355 1386.829474584871 2 694.4232055544853 MULTI CID FTMS 0 0 0 8981 94707.0703125 0.0983149972120643 -2 0.2589874267578125 14 Unmodified _LLLQLLFQWLT_ REV__ENSG00000111145|ENST00000228741|ELK3 5.296884461304476 0.8501568894076437 5 {I|L} 1 -1 9.0344 0.0 0.0 0.65144 0.0 0.0 1255.7345781999084 0.0 1255.7345781999084 0.0 7.044676964867502 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.65144 + + 150 + 1 1.936 129410.9 0.6000000238418579 4586 4407 8981 SUDHL4_400M_050219_1,8995 SUDHL4_400M_050219_1,8995,LLLQLLFQWLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8996 48.678 152.0 470560.0 25 0 95737.0 + -1 VLCPGKPRKSK 11 74 635.376228176949 1268.737903420698 2 635.3766357302666 MULTI CID FTMS 0 0 0 8981 603140.375 0.2820225027763166 2 -0.2819862365722656 15 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))PGKPRKSK_ REV__ENSG00000163806|ENST00000334056|SPDYA;REV__ENST00000462832.5_1_2:29038880-29063343:+|nuORF;REV__nc|ENSG00000163806|Q5MJ70-1|SPDYA 13.042465956692816 0.7638483625850725 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L} 5 -1 45.137 0.0 0.0 3.5576 0.0 0.0 0.0 720.3930907588416 720.3930907588416 25.470814288681733 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.91944517631652 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L} 3.5576 - 220 1 1.936 60253.0 1.0 4587 4407 8981 SUDHL4_400M_050219_1,8996 SUDHL4_400M_050219_1,8996,VLCPGKPRKSK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 8998 48.684 72.0 611280.0 25 0 50828.0 + 11247 GESDDSILRL 10 71 552.7801176712202 1103.5456824092405 2 552.7805053591728 MULTI CID FTMS 0 0 0 8997 691908.9375 0.4499295998350908 2 -0.3112945556640625 1 Unmodified _GESDDSILRL_ ENSG00000171858|ENST00000343986|RPS21;ENST00000370562.1_1_20:60963217-60963421:+|nuORF 23.015651743759182 0.4515786786615758 5 {[DA]|[EG]}SDDS{I|L}{I|L}R{I|L} 10 0 + 81.144 0.0 0.0 7.353 7.353 97.043 0.0 0.0 0.0 60.1748453407025 7.695510786217255 7.695510786217255 52.10023459151109 0 0.805462187404089 2.0 0.4247425010840047 0.0 + + {[DA]|[EG]}SDDS{I|L}{I|L}R{I|L};W[DG][EC]{I|L}{I|L}R{I|L};{[CT]|[{M(Oxidation (M))|F}G]}[PG][EC]{I|L}{I|L}R{I|L} 7.353;2.6319;0.75487 +;-;- + 58 + 1 1.938 42551.8 1.0 4588 4408 8997 SUDHL4_400M_050219_1,8998 SUDHL4_400M_050219_1,8998,GESDDSILRL False True GESDDSILRL 48.6839 552.780505359173 21571688.0 8997.0 ENSG00000171858|ENST00000343986|RPS21;;ENST00000370562.1_1_20:60963217-60963421:+|nuORF 7.121269226074219 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 8999 48.685 46.0 897520.0 25 0 106000.0 + 26019 NLYPFVKTV 9 62 540.8072427873527 1079.5999326415051 2 540.8082763552666 MULTI CID FTMS 0 0 0 8997 1169417.0 1.0 0 0.0 2 Unmodified _NLYPFVKTV_ ENSG00000138363|ENST00000236959|ATIC;ENST00000427397.5_1_2:216176945-216197107:+|nuORF;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC 24.99096001346401 0.2132109383330889 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y 3 6 39.749 0.0 0.0 3.6819 0.0 0.0 0.0 686.3858705967388 686.3858705967388 8.322646798160562 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.3054621874040891 + {[QV]|[N{I|L}]|[RA]|[KV]}Y 3.6819 + + 75 1 1.938 40657.2 1.0 4589 4408 8997 SUDHL4_400M_050219_1,8999 SUDHL4_400M_050219_1,8999,NLYPFVKTV False True NLYPFVKTV 48.685173 540.8089 21590606.0 8997.0 ENSG00000138363|ENST00000236959|ATIC;;ENST00000427397.5_1_2:216176945-216197107:+|nuORF;;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;;nc|ENSG00000138363|P31939-2|ATIC 6.321365674336751 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9000 48.687 74.0 941090.0 25 0 108530.0 + 1462 ALFEGKVQL 9 88 502.7922512631642 1003.5699495931284 2 502.7927429080009 MULTI CID FTMS 0 0 0 8997 516022.40625 0.1723267327435295 -1 0.0916404724121093 3 Unmodified _ALFEGKVQL_ ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF;nc|ENSG00000157796|Q8NEZ3-2|WDR19 39.957323273325 0.0756908302845263 5 [{I|L}A]{M(Oxidation (M))|F}E 4 5 46.242 0.0 0.0 4.6078 0.0 0.0 0.0 540.3159678708865 540.3159678708865 21.271278079431752 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.3807196863200844 0.0 + [{I|L}A]{M(Oxidation (M))|F}E 4.6078 + + 511 + 1 1.938 60069.3 1.0 4590 4408 8997 SUDHL4_400M_050219_1,9000 SUDHL4_400M_050219_1,9000,ALFEGKVQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9001 48.689 101.0 519610.0 25 0 94606.0 + 31275 RLWPKIQGL 9 71 555.8426708728567 1109.6707888125134 2 555.8428832888603 MULTI CID FTMS 0 0 0 8997 406603.40625 0.28341810189008 3 -0.4359664916992187 4 Unmodified _RLWPKIQGL_ ENSG00000168209|ENST00000307365|DDIT4 18.1463463914782 0.3454829746528889 5 [R{I|L}]WPK{I|L} 6 3 21.604 0.0 0.0 1.9469 0.0 0.0 0.0 313.1530972361965 313.1530972361965 1.911225100727588 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + [R{I|L}]WPK{I|L} 1.9469 + + 66 1 1.938 46884.2 1.0 4591 4408 8997 SUDHL4_400M_050219_1,9001 SUDHL4_400M_050219_1,9001,RLWPKIQGL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9002 48.692 143.0 498810.0 25 0 30546.0 + 42399 VTDYVEAQI 9 111 519.2593287089297 1036.5041044846594 2 519.2609130740166 MULTI CID FTMS 0 0 0 8997 288590.125 0.8261063993680184 -1 0.0916404724121093 5 Unmodified _VTDYVEAQI_ REV__ENSG00000185010|ENST00000360256|F8 23.1484247019978 0.2366544122328345 5 {[TV]|[{I|L}S]}DD{M(Oxidation (M))|F}T 6 -1 19.725 0.0 0.0 1.903 0.0 0.0 0.0 355.1951194595219 355.1951194595219 2.7746269321002544 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.6694451763165201 0.0 {[TV]|[{I|L}S]}DD{M(Oxidation (M))|F}T 1.903 - 198 1 1.938 60513.6 1.0 4592 4408 8997 SUDHL4_400M_050219_1,9002 SUDHL4_400M_050219_1,9002,VTDYVEAQI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9003 48.695 160.0 329940.0 25 0 23058.0 + + -1 ALWDIETGQQTT 12 95 681.8310074904866 0 681.8309203982353 PEAK CID FTMS 0 0 0 8997 281164.34375 1.0 0 0.0 6 Carbamidomethyl (C),Oxidation (M) _LADFM(Oxidation (M))VQLLHC(Carbamidomethyl (C))_ ENST00000461893.5_1_1:1720336-1724757:-|nuORF;ENSG00000078369|ENST00000378609|GNB1;nc|ENSG00000078369|P62873-2|GNB1 10.073929032068715 0.4495801685015257 5 {I|L}HQT 4 -1 10.948 0.0 0.0 0.80402 0.0 0.0 763.332167713592 116.03559290103748 879.3677606146294 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 {I|L}HQT 0.80402 - 129 + 1 1.938 43048.9 1.0 4593 4408 8997 SUDHL4_400M_050219_1,9003 SUDHL4_400M_050219_1,9003,LADFMVQLLHC False False ALWDIETGQQTT 48.695123 681.830920398235 2148764.5 8997.0 ENST00000461893.5_1_1:1720336-1724757:-|nuORF;;ENSG00000078369|ENST00000378609|GNB1;;nc|ENSG00000078369|P62873-2|GNB1 5.270854949951172 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9004 48.709 800.0 196030.0 25 0 34140.0 38861 TVIRRARPEL 10 149 605.8720565324677 1209.7295601317353 2 605.8720580935478 MULTI CID FTMS 0 0 0 8997 253171.3125 1.0 0 0.0 7 Unmodified _TVIRRARPEL_ ENSG00000143303|ENST00000368216|METTL25B 6.723162845929126 0.6955379296933136 5 {[QN]|[E{I|L}]|[KN]}K 3 8 16.398 0.0 0.0 1.3555 0.0 0.0 0.0 836.4860353116759 836.4860353116759 4.179884361371123 0.0 0.0 0.0 0 0.0 0.585026652029182 0.1595680409956017 0.0 {[QN]|[E{I|L}]|[KN]}K 1.3555 - 155 1 1.938 113987.1 0.9399999976158142 4594 4408 8997 SUDHL4_400M_050219_1,9004 SUDHL4_400M_050219_1,9004,TVIRRARPEL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9005 48.714 249.0 130760.0 25 0 29400.0 + 11588 GKPNTRQQLRR 11 64 451.9324372672723 1352.775482402017 3 451.9327575564384 MULTI CID FTMS 0 0 0 8997 213716.171875 0.752224831594308 -3 0.3506278991699219 8 Unmodified _GKPNTRQQLRR_ REV__ENSG00000007923|ENST00000377577|DNAJC11;REV__ENST00000485073.5_1_1:6713895-6761860:-|nuORF;REV__nc|ENSG00000007923|Q9NVH1-2|DNAJC11;REV__nc|ENSG00000007923|Q9NVH1-3|DNAJC11 0.3070304955306653 0.8736993455979228 5 C(Carbamidomethyl (C)) 1 -1 0.71334 0.0 0.0 0.052731 0.0 0.0 1036.659528888148 153.05585657291252 1189.7153854610606 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.052731 - 1 + 1 1.938 39488.6 1.0 4595 4408 8997 SUDHL4_400M_050219_1,9005 SUDHL4_400M_050219_1,9005,GKPNTRQQLRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9006 48.72 360.0 175240.0 25 0 41934.0 + -1 RYMKKKKTLW 10 73 699.4085730626555 1396.8025931921109 2 699.4098998904228 MULTI CID FTMS 0 0 0 8997 176167.796875 0.5283134289277112 2 -0.3112945556640625 9 Oxidation (M) _RYM(Oxidation (M))KKKKTLW_ REV__ENST00000499247.2_1_17:48940312-48940357:-|nuORF 1.6526216038709556 0.7189921496796233 5 [{I|L}P]AH 4 -1 15.864 0.0 0.0 1.1357 0.0 0.0 0.0 975.5574509404108 975.5574509404108 4.080913410445376 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 [{I|L}P]AH 1.1357 - 79 1 1.938 57674.9 1.0 4596 4408 8997 SUDHL4_400M_050219_1,9006 SUDHL4_400M_050219_1,9006,RYMKKKKTLW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9007 48.734 800.0 110610.0 25 0 8484.2 -1 0 96 1028.8262179512594 3083.4568244539787 3 1029.494433581829 MULTI CID FTMS 0 0 0 8997 179026.3125 1.0 0 0.0 10 5 ANVM{[QN]|[E{I|L}]|[KN]} 6 -1 32.664 0.0 0.0 1.0593 0.0 0.0 2408.1306230151786 0.0 2408.1306230151786 0.0 5.561155177141153 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 ANVM{[QN]|[E{I|L}]|[KN]} 1.0593 - 1024 1 1.938 65844.6 0.7099999785423279 4597 4408 8997 SUDHL4_400M_050219_1,9007 SUDHL4_400M_050219_1,9007, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9008 48.748 800.0 154740.0 25 0 14301.0 + -1 WCPDPCQKD 9 121 574.7284157740294 1147.4422786148589 2 574.7291137576103 MULTI CID FTMS 0 0 0 8997 164366.359375 1.0 0 0.0 11 Carbamidomethyl (C) _WC(Carbamidomethyl (C))PDPCQKD_ REV__ENST00000373019.4_1_1:38445161-38446288:-|nuORF 4.3292370932331545 0.7635526921153418 5 EEWNPD{I|L}[MD] 9 -1 + 36.589 0.0 0.0 3.1888 3.1888 82.88 0.0 0.0 0.0 9.678024757013269 7.147642715192507 7.147642715192507 9.208187539523752 0 0.0 0.0 0.4247425010840047 0.0 EEWNPD{I|L}[MD];EEWGGPD{I|L}[MD];EEWNP{[ET]|[MV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]WEED{I|L}[MD];EEWGGP{[ET]|[MV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};EE[YT][{M(Oxidation (M))|F}T]{I|L}[MD];[NP]WDEE{I|L}[MD] 3.1888;2.3863;1.5546;1.234;0.75215;0.22852;0.07674 -;-;-;-;-;-;- 251 1 1.938 96001.3 0.7099999785423279 4598 4408 8997 SUDHL4_400M_050219_1,9008 SUDHL4_400M_050219_1,9008,WCPDPCQKD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9009 48.762 800.0 145610.0 25 0 20465.0 + 5391 DLKRPRRARDG 11 120 670.3873393984784 1338.760125863757 2 670.3882324099541 MULTI CID FTMS 0 0 0 8997 164370.390625 0.5714361995863164 -1 0.0916404724121093 12 Unmodified _DLKRPRRARDG_ REV__ENSG00000130487|ENST00000648057|KLHDC7B 5.296884461304476 0.8501568894076437 5 {NN|[MP]|[D{I|L}]|[EV]}R 3 -1 10.635 0.0 0.0 0.79438 0.0 0.0 0.0 951.5243830261192 951.5243830261192 0.6348625752110664 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}R 0.79438 - 91 1 1.938 99065.3 0.75 4599 4408 8997 SUDHL4_400M_050219_1,9009 SUDHL4_400M_050219_1,9009,DLKRPRRARDG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9010 48.777 800.0 210410.0 25 0 17012.0 + 12070 GQFLPQTQF 9 198 533.2732541650291 0 533.2735473513603 PEAK CID FTMS 0 0 0 8997 149380.609375 1.0 0 0.0 13 Unmodified _GQFLPQTQF_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 46.020951573049366 0.0425517664003206 5 {M(Oxidation (M))|F}QTH 4 6 22.592 0.0 0.0 2.1223 0.0 0.0 463.2465682892394 85.0301989191039 548.2767672083432 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5649093276264391 0.5796896906561032 {M(Oxidation (M))|F}QTH 2.1223 - 263 + 1 1.938 130490.7 0.5600000023841858 4600 4408 8997 SUDHL4_400M_050219_1,9010 SUDHL4_400M_050219_1,9010,GQFLPQTQF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9011 48.789 702.0 197060.0 25 0 25416.0 + 14372 IFAKVEKF 8 158 491.29240624207387 980.5702595509478 2 491.2926208376884 MULTI CID FTMS 0 0 0 8997 127744.7265625 1.0 0 0.0 14 Unmodified _IFAKVEKF_ REV__ENSG00000172752|ENST00000373157|COL6A5;REV__nc|ENSG00000172752|A8TX70-2|COL6A5;REV__nc|ENSG00000172752|A8TX70|COL6A5 46.92087301778293 0.1537303740847981 5 AQC(Carbamidomethyl (C)){I|L} 4 -1 21.211 0.0 0.0 2.1632 0.0 0.0 490.3421536702477 0.0 490.3421536702477 0.0 0.9675825681847704 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 AQC(Carbamidomethyl (C)){I|L} 2.1632 - 499 + 1 1.938 106109.4 1.0 4601 4408 8997 SUDHL4_400M_050219_1,9011 SUDHL4_400M_050219_1,9011,IFAKVEKF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9012 48.8 540.0 171520.0 25 0 21611.0 -1 0 131 406.245959488856 405.238683022256 1 406.2475768923759 MULTI CID FTMS 0 0 0 8997 116398.6875 0.8212888369452729 4 -0.5802421569824219 15 5 {I|L} 1 -1 9.5329 0.0 0.0 2.3524 0.0 0.0 274.143908707606 0.0 274.143908707606 0.0 5.328049911595727 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.3524 - 8 + 1 1.938 75961.0 1.0 4602 4408 8997 SUDHL4_400M_050219_1,9012 SUDHL4_400M_050219_1,9012, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9013 48.814 800.0 144290.0 25 0 16682.0 + 31161 RLPDTALPTL 10 114 548.8219715341809 0 548.8215209841728 PEAK CID FTMS 0 0 0 8997 111716.3515625 0.9688287888980408 -1 0.0916404724121093 16 Unmodified _RLPDTALPTL_ ENSG00000262246|ENST00000251166|CORO7;ENST00000575531.5_1_16:4407102-4412712:-|nuORF;ENST00000575714.5_1_16:4408319-4455566:-|nuORF;nc|ENSG00000262246|P57737-2|CORO7;nc|ENSG00000262246|P57737-3|CORO7;nc|ENSG00000262246|P57737-4|CORO7 53.40400417844725 0.0334336717583275 5 {I|L}PT 3 7 28.63 0.0 0.0 2.6131 0.0 0.0 653.3500149904336 128.07215295963127 781.4221679500648 0.0 0.0 0.0 0.0 0 1.5 0.0 0.6462566630072955 0.0 + {I|L}PT 2.6131 + + 104 + 1 1.938 92208.7 0.4799999892711639 4603 4408 8997 SUDHL4_400M_050219_1,9013 SUDHL4_400M_050219_1,9013,RLPDTALPTL True True RLPDTALPTL 48.81361 548.821520984173 1420711.875 8997.0 nc|ENSG00000262246|P57737-2|CORO7;;nc|ENSG00000262246|P57737-4|CORO7;;ENST00000575531.5_1_16:4407102-4412712:-|nuORF;;ENSG00000262246|ENST00000251166|CORO7;;nc|ENSG00000262246|P57737-3|CORO7;;ENST00000575714.5_1_16:4408319-4455566:-|nuORF 5.064045588175456 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9014 48.826 716.0 136930.0 25 0 6637.5 + 9658 FLPPAPAAL 9 150 448.7652424910698 895.5159320489397 2 448.7656738162041 MULTI CID FTMS 0 0 0 8997 100366.53125 1.0 0 0.0 17 Unmodified _FLPPAPAAL_ ENST00000407319.6_1_22:38142252-38150984:+|nuORF 28.17323086031832 0.1727213568982648 5 A{I|L} 2 7 16.454 0.0 0.0 1.8373 0.0 0.0 693.3838042186647 0.0 693.3838042186647 0.0 5.033666913294841 0.0 0.0 0 0.0 0.0 0.0 0.0 + A{I|L} 1.8373 + + 103 + 1 1.938 79244.7 1.0 4604 4408 8997 SUDHL4_400M_050219_1,9014 SUDHL4_400M_050219_1,9014,FLPPAPAAL False True FLPPAPAAL 48.826042 448.765673816204 1322040.25 8997.0 ENST00000407319.6_1_22:38142252-38150984:+|nuORF 2.7389874855677285 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9015 48.841 800.0 113960.0 25 0 9556.0 + 11793 GLLQQPPAL 9 137 468.7792782813852 935.5440036295704 2 468.7791320681572 MULTI CID FTMS 0 0 0 8997 96068.65625 0.573715903042627 3 -0.4359664916992187 18 Unmodified _GLLQQPPAL_ ENSG00000112242|ENST00000346618|E2F3 32.116972079565 0.1225432171549407 5 {[VA]|[{I|L}G]}AQVA 6 5 26.445 0.0 0.0 2.8267 0.0 0.0 0.0 393.213542851622 393.213542851622 12.949723176432189 0.0 0.0 0.0 0 0.7742275032520141 1.3010299956639813 0.0 0.3252574989159953 {[VA]|[{I|L}G]}AQVA 2.8267 - 222 1 1.938 73746.6 0.4199999868869781 4605 4408 8997 SUDHL4_400M_050219_1,9015 SUDHL4_400M_050219_1,9015,GLLQQPPAL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9016 48.855 800.0 123330.0 25 0 12758.0 40663 VLEPITKTL 9 150 507.3162327856454 0 507.3158141970634 PEAK CID FTMS 0 0 0 8997 92549.4765625 1.0 0 0.0 19 Unmodified _VLEPITKTL_ ENST00000473023.1_1_2:75186385-75187232:+|nuORF 16.942295170755138 0.2326366549411506 5 WH 2 9 10.969 0.0 0.0 1.0832 0.0 0.0 183.13672474922208 503.31306687212026 686.4497916213423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WH 1.0832 - 108 + 1 1.938 76796.3 0.4399999976158142 4606 4408 8997 SUDHL4_400M_050219_1,9016 SUDHL4_400M_050219_1,9016,VLEPITKTL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9017 48.869 800.0 83140.0 25 0 5080.8 + 14551 IHIIIKRNLFW 11 116 726.9474773059496 1451.8804016786992 2 726.9479858279228 MULTI CID FTMS 0 0 0 8997 87896.734375 0.6327472120564779 -1 0.0916404724121093 20 Unmodified _IHIIIKRNLFW_ REV__ENST00000311806.7_1_3:38295131-38295401:+|nuORF 1.4819007175156935 0.86815623132643 5 {[HG]|PP}QQ{I|L} 5 -1 19.565 0.0 0.0 1.3476 0.0 0.0 0.0 885.5745294465304 885.5745294465304 7.857894026755828 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 {[HG]|PP}QQ{I|L} 1.3476 - 164 1 1.938 60777.5 0.4799999892711639 4607 4408 8997 SUDHL4_400M_050219_1,9017 SUDHL4_400M_050219_1,9017,IHIIIKRNLFW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9019 48.874 46.0 943930.0 25 0 74052.0 + -1 QLQKAMALQL 10 56 580.3271007898812 1158.6396486465624 2 580.3274413943291 MULTI CID FTMS 0 0 0 9018 982827.3125 0.4356034844207826 1 -0.1209487915039062 1 Oxidation (M) _QLQKAM(Oxidation (M))ALQL_ REV__ENST00000483599.5_1_9:131598322-131607768:-|nuORF 18.1463463914782 0.5430639438673815 5 G{I|L}AQ{I|L} 5 -1 44.653 0.0 0.0 3.8539 0.0 0.0 658.3425942618098 0.0 658.3425942618098 0.0 29.436726795685345 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 G{I|L}AQ{I|L} 3.8539 - 65 1 1.938 38297.8 1.0 4608 4409 9018 SUDHL4_400M_050219_1,9019 SUDHL4_400M_050219_1,9019,QLQKAMALQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9020 48.875 51.0 576290.0 25 0 175380.0 + 43360 WPLLVDKLVDR 11 49 677.3953084722584 1352.7760640113167 2 677.3958007693291 MULTI CID FTMS 0 0 0 9018 1000925.3125 1.0 0 0.0 2 Unmodified _WPLLVDKLVDR_ REV__ENSG00000196305|ENST00000443024|IARS1;REV__ENST00000472894.1_1_9:95018893-95021273:-|nuORF 1.3295316138638542 0.8688751186870782 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.938 35359.3 1.0 4609 4409 9018 SUDHL4_400M_050219_1,9020 SUDHL4_400M_050219_1,9020,WPLLVDKLVDR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9021 48.877 73.0 1092800.0 25 0 164370.0 + 33639 SISDVIAQV 9 95 466.2584202423929 930.5022875515858 2 466.2585937380791 MULTI CID FTMS 0 0 0 9018 1237083.0 1.0 0 0.0 3 Unmodified _SISDVIAQV_ ENSG00000154122|ENST00000284268|ANKH 77.98433622928108 0.0180125044636492 5 {[TV]|[{I|L}S]}[DV]S{I|L} 6 5 40.084 0.0 0.0 4.3078 0.0 0.0 0.0 313.15326346394835 313.15326346394835 18.568532812289703 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.2887254899964358 0.0 {[TV]|[{I|L}S]}[DV]S{I|L} 4.3078 - 321 1 1.938 64199.2 1.0 4610 4409 9018 SUDHL4_400M_050219_1,9021 SUDHL4_400M_050219_1,9021,SISDVIAQV True True SISDVIAQV 48.876862 466.258593738079 7027005.0 9018.0 ENSG00000154122|ENST00000284268|ANKH 4.6287416617075605 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9022 48.879 70.0 679460.0 25 0 141360.0 + 11055 GDKLLMWTY 9 59 563.7850587799377 1125.5555646266753 2 563.7856933474541 MULTI CID FTMS 0 0 0 9018 583158.375 0.3731393588944893 -1 0.1903457641601562 4 Unmodified _GDKLLMWTY_ REV__ENSG00000134242|ENST00000359785|PTPN22;REV__ENST00000484147.5_1_1:114375712-114414257:-|nuORF;REV__nc|ENSG00000134242|Q9Y2R2-2|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2-3|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2-4|PTPN22;REV__nc|ENSG00000134242|Q9Y2R2|PTPN22 18.1463463914782 0.3454829746528889 5 {I|L}{I|L}D[KG]{I|L}{M(Oxidation (M))|F} 7 -1 34.314 0.0 0.0 3.0486 0.0 0.0 0.0 336.0694979303344 336.0694979303344 2.359083410028333 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 {I|L}{I|L}D[KG]{I|L}{M(Oxidation (M))|F} 3.0486 - 51 + 1 1.938 41917.5 1.0 4611 4409 9018 SUDHL4_400M_050219_1,9022 SUDHL4_400M_050219_1,9022,GDKLLMWTY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9023 48.881 142.0 437680.0 25 0 58722.0 + 14630 IIIPEIQKV 9 67 526.839369196946 1051.664185460692 2 526.8395263552666 MULTI CID FTMS 0 0 0 9018 367039.75 0.6375227022303279 -1 0.1903457641601562 5 Unmodified _IIIPEIQKV_ ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;nc|ENSG00000124207|P55060-3|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L 30.63653989081413 0.1413794767160703 5 {I|L}{I|L}{I|L}{M(Oxidation (M))|F} 4 6 37.92 0.0 0.0 3.6057 0.0 0.0 0.0 562.3237062949294 562.3237062949294 -0.5945039080549108 0.0 -0.5945039080549108 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {I|L}{I|L}{I|L}{M(Oxidation (M))|F} 3.6057 - 174 1 1.938 55571.9 1.0 4612 4409 9018 SUDHL4_400M_050219_1,9023 SUDHL4_400M_050219_1,9023,IIIPEIQKV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9024 48.885 165.0 280660.0 25 0 35490.0 + 28704 PVSGSVTIPVL 11 64 534.8183338613851 1067.62211478957 2 534.8190185427666 MULTI CID FTMS 0 0 0 9018 343891.125 0.9713807436240018 -2 0.2819862365722656 6 Unmodified _PVSGSVTIPVL_ ENSG00000161682|ENST00000293443|FAM171A2 30.63653989081413 0.3728473165938781 5 {I|L}K{I|L}PV{I|L} 6 7 42.396 0.0 0.0 3.971 0.0 0.0 386.1432362287125 0.0 386.1432362287125 0.0 32.562893943202624 0.0 0.0 0 1.1677353201839438 0.0 0.0 0.3807196863200844 {I|L}K{I|L}PV{I|L} 3.971 - 36 1 1.938 45600.6 1.0 4613 4409 9018 SUDHL4_400M_050219_1,9024 SUDHL4_400M_050219_1,9024,PVSGSVTIPVL False True PVSGSVTIPVL 48.88462 534.819018542767 4296967.5 9018.0 ENSG00000161682|ENST00000293443|FAM171A2 -0.2492369810740153 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9025 48.887 113.0 387500.0 25 0 37901.0 + -1 IMLEALERV 9 79 545.3014583107221 1088.588363688244 2 545.3025390505791 MULTI CID FTMS 0 0 0 9018 299712.09375 0.7018343155646247 1 -0.1209487915039062 7 Oxidation (M) _IM(Oxidation (M))LEALERV_ nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG 19.361941925380144 0.3125782356748823 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EA{I|L}E[RV] 9 -1 + 49.402 0.0 0.0 4.5382 4.5382 82.445 0.0 0.0 0.0 38.43326954115149 4.137342758552691 4.137342758552691 6.020599913279625 0 0.5 1.154901959985743 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EA{I|L}E[RV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}EA{I|L}[RD]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[DV]{I|L}E[RV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[DV]{I|L}[RD]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[KG]AAE[RV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RK]AAE[RV] 4.5382;3.9851;3.1145;2.5615;1.7688;1.1465 +;-;-;-;-;- + 92 + 1 1.938 39286.7 1.0 4614 4409 9018 SUDHL4_400M_050219_1,9025 SUDHL4_400M_050219_1,9025,IMLEALERV False False IMLEALERV 48.886995 545.302539050579 5136815.5 9018.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 4.4535590807596845 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9026 48.891 241.0 301300.0 25 0 29237.0 + 22897 LSDELPSPL 9 94 485.757749146479 969.500945359758 2 485.7579833865166 MULTI CID FTMS 0 0 0 9018 295069.5 0.6665503772570105 9 -0.9261436462402344 8 Unmodified _LSDELPSPL_ REV__nc|ENSG00000090061|O75909-2|CCNK 36.04419817259434 0.0971720506436186 5 PPS{I|L} 4 -1 29.506 0.0 0.0 3.0434 0.0 0.0 557.2687333883971 0.0 557.2687333883971 0.0 20.336980384599293 0.0 0.0 0 0.4247425010840047 0.0 1.1382104921644451 0.0 PPS{I|L} 3.0434 - 306 + 1 1.938 59861.4 1.0 4615 4409 9018 SUDHL4_400M_050219_1,9026 SUDHL4_400M_050219_1,9026,LSDELPSPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9027 48.905 800.0 92776.0 25 0 17931.0 + 31665 RRHGRLLLRRH 11 113 735.4613489373575 1468.9081449415148 2 735.4618408083916 MULTI CID FTMS 0 0 0 9018 274243.6875 1.0 0 0.0 9 Unmodified _RRHGRLLLRRH_ REV__ENST00000282146.4_1_14:90528455-90650665:+|nuORF 0.3070304955306653 0.8736993455979228 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L} 4 -1 13.823 0.0 0.0 0.94105 0.0 0.0 0.0 1007.6322104534868 1007.6322104534868 3.9903121002264985 0.0 0.0 0.0 0 0.0 1.0 0.2396518287104437 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L} 0.94105 - 115 1 1.938 92829.5 0.9700000286102296 4616 4409 9018 SUDHL4_400M_050219_1,9027 SUDHL4_400M_050219_1,9027,RRHGRLLLRRH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9028 48.908 137.0 319250.0 25 0 29769.0 -1 LVMALTTTPV 10 81 531.2990501532049 1060.5835473732095 2 531.2997924685478 MULTI CID FTMS 0 0 0 9018 238656.671875 1.0 0 0.0 10 Oxidation (M) _LVM(Oxidation (M))ALTTTPV_ ENSG00000283439|ENST00000636696|SPEM3 20.453626601364224 0.5043500229302764 5 [{I|L}T]TD 4 -1 33.232 0.0 0.0 3.1334 0.0 0.0 0.0 627.3476656549436 627.3476656549436 20.757659435244733 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 [{I|L}T]TD 3.1334 - 66 + 1 1.938 41350.1 1.0 4617 4409 9018 SUDHL4_400M_050219_1,9028 SUDHL4_400M_050219_1,9028,LVMALTTTPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9029 48.912 214.0 331320.0 25 0 40827.0 42624 VTTLRVPVF 9 87 516.3140801822988 1030.6136074313974 2 516.3148681521416 MULTI CID FTMS 0 0 0 9018 200086.484375 0.0631534992116326 4 -0.5116195678710938 11 Unmodified _VTTLRVPVF_ ENSG00000221914|ENST00000380737|PPP2R2A;nc|ENSG00000221914|P63151-2|PPP2R2A 4.75600775471527 0.7486543447549536 5 V 1 8 10.278 0.0 0.0 0.99723 0.0 0.0 913.5341605703608 0.0 913.5341605703608 0.0 0.2775866392491544 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.99723 + + 43 + 1 1.938 60451.0 1.0 4618 4409 9018 SUDHL4_400M_050219_1,9029 SUDHL4_400M_050219_1,9029,VTTLRVPVF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9030 48.918 330.0 212570.0 25 0 32697.0 + 22853 LSAARYALL 9 104 489.29242526771367 976.5702976022274 2 489.2928039431572 MULTI CID FTMS 0 0 0 9018 178426.609375 0.8386459755718803 -1 0.1903457641601562 12 Unmodified _LSAARYALL_ ENSG00000124067|ENST00000316341|SLC12A4;ENSG00000124140|ENST00000243964|SLC12A5;nc|ENSG00000124067|Q9UP95-2|SLC12A4;nc|ENSG00000124067|Q9UP95-3|SLC12A4;nc|ENSG00000124067|Q9UP95-4|SLC12A4;nc|ENSG00000124067|Q9UP95-5|SLC12A4;nc|ENSG00000124067|Q9UP95-6|SLC12A4;nc|ENSG00000124067|Q9UP95-7|SLC12A4;nc|ENSG00000124140|Q9H2X9|SLC12A5 32.30548876998284 0.1201446275138228 5 [{I|L}A][YN]SA{I|L}{I|L}{I|L} 9 5 + 52.654 0.0 0.0 5.3917 5.3917 80.394 0.0 0.0 0.0 7.269987279362624 9.889917747712644 7.269987279362624 1.5186375580366729 0 0.7742275032520141 2.0 0.6549471895720985 0.0 [{I|L}A][YN]SA{I|L}{I|L}{I|L};[{I|L}A][YN]S{I|L}A{I|L}{I|L};[{I|L}A][YG]GSA{I|L}{I|L}{I|L};[{I|L}A][YG]GS{I|L}A{I|L}{I|L};[HN]{I|L}PSA{I|L}{I|L}{I|L};[HN]P{I|L}SA{I|L}{I|L}{I|L};[HN]{I|L}PS{I|L}A{I|L}{I|L};{[VA]|[{I|L}G]}[YQ]SA{I|L}{I|L}{I|L};[HN]P{I|L}S{I|L}A{I|L}{I|L};[HN]PS{I|L}A{I|L}{I|L}{I|L} 5.3917;5.2362;5.1953;5.0397;4.6473;4.5194;4.4918;4.467;4.3639;4.3391 -;-;-;-;-;-;-;-;-;- 746 1 1.938 56451.2 1.0 4619 4409 9018 SUDHL4_400M_050219_1,9030 SUDHL4_400M_050219_1,9030,LSAARYALL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9031 48.921 167.0 473880.0 25 0 25195.0 + 1847 ALVDQRELYL 10 96 610.3394673423041 1218.6643817514082 2 610.3411743044853 MULTI CID FTMS 0 0 0 9018 192346.671875 0.735034088404688 -1 0.1903457641601562 13 Unmodified _ALVDQRELYL_ ENSG00000167515|ENST00000696289|TRAPPC2L;ENST00000561840.1_2_16:88923580-88926055:+|nuORF;ENST00000564547.1_1_16:88923507-88925305:+|nuORF;ENST00000565309.1_1_16:88925068-88926212:+|nuORF;nc|ENSG00000167515|Q9UL33|TRAPPC2L 40.23920728925047 0.1550410903091231 5 [{I|L}A][WQ]E{I|L}A{I|L}Y{I|L} 10 5 + 52.77 0.0 0.0 4.3301 4.3301 86.404 0.0 0.0 0.0 23.0890671933342 35.378851766332374 23.0890671933342 11.205739312058512 0 0.9247425010840048 2.0 0.2887254899964357 0.0 [{I|L}A][WQ]E{I|L}A{I|L}Y{I|L};[{I|L}A]AA[WD]{I|L}A{I|L}Y{I|L};[{I|L}A][WQ]R[RN]Y{I|L};[{I|L}A][WQ]E{I|L}Y[{I|L}A]{I|L} 4.3301;3.4106;2.8391;2.69 -;-;-;- 119 1 1.938 63872.9 1.0 4620 4409 9018 SUDHL4_400M_050219_1,9031 SUDHL4_400M_050219_1,9031,ALVDQRELYL False True ALVDQRELYL 48.921451 610.341174304485 770561.3125 9018.0 ENST00000561840.1_2_16:88923580-88926055:+|nuORF;;ENST00000565309.1_1_16:88925068-88926212:+|nuORF;;ENSG00000167515|ENST00000696289|TRAPPC2L;;ENST00000564547.1_1_16:88923507-88925305:+|nuORF;;nc|ENSG00000167515|Q9UL33|TRAPPC2L 5.349392573038737 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9032 48.932 538.0 147800.0 25 0 7577.4 + 1886 ALWDIETGQQT 11 110 631.3057584198506 1260.596963906501 2 631.3069946169853 MULTI CID FTMS 0 0 0 9018 86252.03125 1.0 0 0.0 14 Unmodified _ALWDIETGQQT_ ENSG00000078369|ENST00000378609|GNB1;ENSG00000172354|ENST00000303210|GNB2;ENST00000461893.5_1_1:1720336-1724757:-|nuORF;nc|ENSG00000078369|P62873-2|GNB1;nc|ENSG00000172354|P62879-2|GNB2 20.41453444215458 0.6105011870913812 5 [QT]GQE 5 8 17.91 0.0 0.0 1.4207 0.0 0.0 0.0 714.3433988032385 714.3433988032385 0.9984610032890906 0.0 0.0 0.0 0 0.0 0.0 0.531234684152075 0.5941876774005248 [QT]GQE 1.4207 - 420 1 1.938 63615.1 1.0 4621 4409 9018 SUDHL4_400M_050219_1,9032 SUDHL4_400M_050219_1,9032,ALWDIETGQQT False True ALWDIETGQQT 48.932084 631.306994616985 686930.625 9018.0 ENST00000461893.5_1_1:1720336-1724757:-|nuORF;;ENSG00000078369|ENST00000378609|GNB1;;nc|ENSG00000078369|P62873-2|GNB1;;nc|ENSG00000172354|P62879-2|GNB2;;ENSG00000172354|ENST00000303210|GNB2 3.186724821726481 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9033 48.935 151.0 358450.0 25 0 65350.0 13160 HFQLHFLLRP 10 80 654.3747103439333 1306.7348677546663 2 654.3751708865166 MULTI CID FTMS 0 0 0 9018 266175.84375 1.0 0 0.0 15 Unmodified _HFQLHFLLRP_ ENSG00000178297|ENST00000696167|TMPRSS9;ENST00000395264.3_1_19:2389783-2414036:+|nuORF 1.6526216038709556 0.7189921496796233 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.938 50745.3 1.0 4622 4409 9018 SUDHL4_400M_050219_1,9033 SUDHL4_400M_050219_1,9033,HFQLHFLLRP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9034 48.941 312.0 278120.0 25 0 45915.0 -1 0 69 626.3630170060376 625.3557405394375 1 627.3676025271416 MULTI CID FTMS 0 0 0 9018 213609.046875 0.6304501091426059 -2 0.2819862365722656 16 5 [{I|L}V][KT]M 5 -1 15.859 0.0 0.0 2.5359 0.0 0.0 0.0 50.00311537758128 50.00311537758128 15.479962012239064 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 [{I|L}V][KT]M 2.5359 - 13 1 1.938 69651.8 1.0 4623 4409 9018 SUDHL4_400M_050219_1,9034 SUDHL4_400M_050219_1,9034, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9035 48.955 800.0 102970.0 25 0 21039.0 + -1 PRLKWCRVLV 10 116 663.8955472668355 1325.7765416004709 2 663.8947631716728 MULTI CID FTMS 0 0 0 9018 154427.4375 0.1446872712580005 5 -0.6113815307617188 17 Carbamidomethyl (C) _PRLKWC(Carbamidomethyl (C))RVLV_ REV__ENST00000324225.8_1_11:117049861-117050083:+|nuORF 1.4819007175156935 0.719781833666733 5 Y 1 -1 10.089 0.0 0.0 0.76096 0.0 0.0 1144.702305615899 0.0 1144.702305615899 0.0 0.9399524117769432 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.76096 - 26 + 1 1.938 72164.1 0.7400000095367432 4624 4409 9018 SUDHL4_400M_050219_1,9035 SUDHL4_400M_050219_1,9035,PRLKWCRVLV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9036 48.961 342.0 166800.0 25 0 28746.0 + -1 VLFSKCKVH 9 86 559.3146647052334 1116.6147764772668 2 559.3146240115166 MULTI CID FTMS 0 0 0 9018 143351.203125 1.0 0 0.0 18 Carbamidomethyl (C) _VLFSKC(Carbamidomethyl (C))KVH_ REV__ENST00000397457.6_2_6:8014843-8014969:-|nuORF 4.75600775471527 0.7486543447549536 5 {I|L} 1 -1 9.6777 0.0 0.0 0.8667 0.0 0.0 985.5196512104684 0.0 985.5196512104684 0.0 2.688010010505222 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.8667 + + 8 + 1 1.938 50473.7 1.0 4625 4409 9018 SUDHL4_400M_050219_1,9036 SUDHL4_400M_050219_1,9036,VLFSKCKVH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9037 48.976 800.0 81642.0 25 0 6725.2 + 7766 ELFRKVRKMKP 11 106 716.4352514760735 1430.855950018947 2 716.4355346560478 MULTI CID FTMS 0 0 0 -1 0 19 Unmodified _ELFRKVRKMKP_ REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF 5.731851221503515 0.8481046878870278 5 {[NV]|[RG]}E{I|L}ER 6 -1 40.208 0.0 0.0 2.8101 0.0 0.0 0.0 687.4329537808487 687.4329537808487 11.479400086720377 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 1.0044321917401078 {[NV]|[RG]}E{I|L}ER 2.8101 - 486 1 1.938 53494.4 0.7099999785423279 4626 4409 9018 SUDHL4_400M_050219_1,9037 SUDHL4_400M_050219_1,9037,ELFRKVRKMKP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9038 48.99 800.0 94450.0 25 0 15550.0 -1 0 113 458.2762332649054 457.2689567983054 1 458.2765380740166 MULTI CID FTMS 0 0 0 9018 136400.65625 1.0 0 0.0 20 5 {I|L} 1 -1 10.0 0.0 0.0 2.1869 0.0 0.0 326.17387730787414 0.0 326.17387730787414 0.0 0.1671187774347515 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.1869 - 12 + 1 1.938 70306.8 0.5099999904632568 4627 4409 9018 SUDHL4_400M_050219_1,9038 SUDHL4_400M_050219_1,9038, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9040 48.995 32.0 1503400.0 25 0 196570.0 + 1463 ALFEGKVQL 9 74 502.7922512631642 1003.5699495931284 2 502.7925903201103 MULTI CID FTMS 0 0 0 9039 1215155.875 0.4058037774650502 1 -0.1246719360351562 1 Unmodified _ALFEGKVQL_ ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF;nc|ENSG00000157796|Q8NEZ3-2|WDR19 48.345845343767074 0.0439967357579942 5 [{I|L}A]{M(Oxidation (M))|F}E 4 5 48.94 0.0 0.0 4.8766 0.0 0.0 0.0 540.3148464662563 540.3148464662563 21.271278079431752 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + [{I|L}A]{M(Oxidation (M))|F}E 4.8766 + + 278 + 1 1.938 41939.5 1.0 4628 4410 9039 SUDHL4_400M_050219_1,9040 SUDHL4_400M_050219_1,9040,ALFEGKVQL True True ALFEGKVQL 48.994515 502.79259032011 71328896.0 9039.0 ENST00000512095.5_1_4:39217537-39276579:+|nuORF;;nc|ENSG00000157796|Q8NEZ3-2|WDR19;;ENSG00000157796|ENST00000399820|WDR19 4.577330112457275 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9041 48.997 143.0 388240.0 25 0 66855.0 + 43073 VYKKLAYIYVK 11 69 694.4220137590355 1386.829474584871 2 694.4221679568291 MULTI CID FTMS 0 0 0 9039 435440.46875 0.4520288541279679 1 -0.1246719360351562 2 Unmodified _VYKKLAYIYVK_ REV__ENSG00000151348|ENST00000533608|EXT2;REV__nc|ENSG00000151348|Q93063-2|EXT2;REV__nc|ENSG00000151348|Q93063-3|EXT2 1.4819007175156935 0.86815623132643 5 {[TV]|[{I|L}S]}VY 4 -1 20.075 0.0 0.0 1.4476 0.0 0.0 0.0 921.5584534269208 921.5584534269208 15.471062485323516 0.0 0.0 0.0 0 0.0 0.6020599913279624 1.024227503252014 0.0 {[TV]|[{I|L}S]}VY 1.4476 - 32 1 1.938 51068.7 1.0 4629 4410 9039 SUDHL4_400M_050219_1,9041 SUDHL4_400M_050219_1,9041,VYKKLAYIYVK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9042 48.999 64.0 630780.0 25 0 70654.0 + + 8371 FLDSEVSEL 9 72 519.752906407922 1037.4912598826438 2 519.7528564333916 MULTI CID FTMS 0 0 0 9039 632516.25 0.5171226034512448 -1 0.1209487915039062 3 Unmodified _ESDLFDSLL_ ENSG00000109805|ENST00000251496|NCAPG 30.22481116460888 0.1466181017706357 5 {[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}E[QT][QA] 9 -1 + 30.366 0.0 0.0 2.9268 2.9268 53.986 0.0 0.0 0.0 4.232712163289282 14.881062318217108 4.232712163289282 0.0 0 0.0 0.0 1.024227503252014 0.0 {[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}E[QT][QA];{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}E[KT][QA];{[ES]|[DT]|[{I|L}C]}D{M(Oxidation (M))|F}{I|L}[KT][QA];{[ES]|[DT]|[{I|L}C]}D{M(Oxidation (M))|F}{I|L}[QT][QA];[VP]{[YC]|[HE]}E[KT][QA];{[QN]|[E{I|L}]|[KN]}C[{M(Oxidation (M))|F}V][KT][QA];{[QN]|[E{I|L}]|[KN]}C[{M(Oxidation (M))|F}V][QT][QA] 2.9268;2.9268;2.4707;2.4707;0.54171;0.37198;0.37198 -;-;-;-;-;-;- 128 1 1.938 37329.9 1.0 4630 4410 9039 SUDHL4_400M_050219_1,9042 SUDHL4_400M_050219_1,9042,ESDLFDSLL False False FLDSEVSEL 48.998961 519.752856433392 7792352.0 9039.0 ENSG00000109805|ENST00000251496|NCAPG 4.946943998336792 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9043 49.001 91.0 362390.0 25 0 100530.0 23285 LSWWLLLAGRR 11 61 685.9088898580812 0 685.9089233279228 PEAK CID FTMS 0 0 0 9039 609223.0 0.763437044393388 1 -0.1246719360351562 4 Unmodified _LSWWLLLAGRR_ ENST00000511799.5_3_5:60095008-60139355:-|nuORF 1.1933415558491238 0.4761840153648598 5 K 1 11 2.4743 0.0 0.0 0.18063 0.0 0.0 911.5309317163592 327.1450289361938 1238.6759606525532 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.18063 - 1 + 1 1.938 38606.6 1.0 4631 4410 9039 SUDHL4_400M_050219_1,9043 SUDHL4_400M_050219_1,9043,LSWWLLLAGRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9044 49.003 111.0 633290.0 25 0 99749.0 + 31283 RLYDGLFKV 9 74 555.8189936343542 1109.6234343355084 2 555.8193237185478 MULTI CID FTMS 0 0 0 9039 386387.28125 0.8104862868033901 -1 0.1209487915039062 5 Unmodified _RLYDGLFKV_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 19.361941925380144 0.3125782356748823 5 [R{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}G{I|L}{M(Oxidation (M))|F}VK 9 2 [R{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}G{I|L} + + 27.774 4.2251 0.58896 2.503 2.503 53.405 0.0 0.0 0.0 0.0 5.555173278498309 0.0 0.0 0 1.0 0.0 0.0 0.3494850021680094 [R{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}G{I|L}{M(Oxidation (M))|F}VK 2.503 - 89 + 1 1.938 59126.6 1.0 4632 4410 9039 SUDHL4_400M_050219_1,9044 SUDHL4_400M_050219_1,9044,RLYDGLFKV False True RLYDGLFKV 49.003334 555.819323718548 3703851.75 9039.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 4.108159343401591 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9045 49.005 72.0 569590.0 25 0 78754.0 + 1505 ALHLKTQKH 9 74 538.3219697679343 1074.6293866026683 2 538.8219482302666 MULTI CID FTMS 0 0 0 9039 405742.875 0.16961053581045 2 -0.2689476013183594 6 Unmodified _ALHLKTQKH_ REV__ENST00000355680.7_1_21:48084242-48084341:+|nuORF 5.230669730166228 0.7320841359114558 5 [{I|L}A][H{I|L}]DAE{I|L} 8 -1 23.114 0.0 0.0 2.1509 0.0 0.0 0.0 209.1527380033123 209.1527380033123 9.926609503452184 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3807196863200844 0.0 [{I|L}A][H{I|L}]DAE{I|L} 2.1509 - 113 1 1.938 38301.7 1.0 4633 4410 9039 SUDHL4_400M_050219_1,9045 SUDHL4_400M_050219_1,9045,ALHLKTQKH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9046 49.008 132.0 432980.0 25 0 101070.0 14781 ILDPAEPTGDV 11 87 376.1932330856933 1125.5578698572797 3 376.1927368044853 MULTI CID FTMS 0 0 0 9039 374573.21875 1.0 0 0.0 7 Unmodified _ILDPAEPTGDV_ ENSG00000111335|ENST00000392583|OAS2;nc|ENSG00000111335|P29728|OAS2 9.38312468134398 0.8308777417566128 5 {I|L}{I|L}D 3 8 34.265 0.0 0.0 3.0442 0.0 0.0 0.0 781.3397310846311 781.3397310846311 14.650509106876154 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}{I|L}D 3.0442 + + 118 + 1 1.938 52726.9 1.0 4634 4410 9039 SUDHL4_400M_050219_1,9046 SUDHL4_400M_050219_1,9046,ILDPAEPTGDV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9047 49.01 132.0 155050.0 25 0 35916.0 42150 VSAIHKLMRWI 11 46 451.9324372672723 1352.775482402017 3 451.9327270388603 MULTI CID FTMS 0 0 0 9039 279318.78125 0.9831287980855268 -1 0.1209487915039062 8 Unmodified _VSAIHKLMRWI_ ENSG00000164077|ENST00000296473|MON1A;ENST00000486107.5_1_3:49946449-49946602:-|nuORF;nc|ENSG00000164077|Q86VX9-2|MON1A;nc|ENSG00000164077|Q86VX9-4|MON1A;nc|ENSG00000164077|Q86VX9|MON1A 0.3070304955306653 0.8736993455979228 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.938 28721.9 1.0 4635 4410 9039 SUDHL4_400M_050219_1,9047 SUDHL4_400M_050219_1,9047,VSAIHKLMRWI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9048 49.014 190.0 312370.0 25 0 36039.0 + 26020 NLYPFVKTV 9 85 540.8072427873527 1079.5999326415051 2 540.8083984255791 MULTI CID FTMS 0 0 0 9039 230129.515625 0.1967899522796402 2 -0.2689476013183594 9 Unmodified _NLYPFVKTV_ ENSG00000138363|ENST00000236959|ATIC;ENST00000427397.5_1_2:216176945-216197107:+|nuORF;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC 38.17557092003332 0.0854718145212029 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y 3 6 40.502 0.0 0.0 3.7516 0.0 0.0 0.0 686.3858507664505 686.3858507664505 17.368259515630765 0.0 0.0 0.0 0 1.0 2.0 0.0 0.3054621874040891 + {[QV]|[N{I|L}]|[RA]|[KV]}Y 3.7516 + + 277 1 1.938 53682.3 1.0 4636 4410 9039 SUDHL4_400M_050219_1,9048 SUDHL4_400M_050219_1,9048,NLYPFVKTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9049 49.021 361.0 300460.0 25 0 43922.0 + 15672 IQPGRGFVLY 10 99 575.323955319973 1148.633357706746 2 575.3240234255791 MULTI CID FTMS 0 0 0 9039 172034.53125 0.2155171165087973 -1 0.1209487915039062 10 Unmodified _IQPGRGFVLY_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 24.881564428377168 0.4096545554397951 5 {I|L}Q{I|L}Y 4 6 40.745 0.0 0.0 3.5473 0.0 0.0 613.3340616339916 0.0 613.3340616339916 0.0 26.043291831680527 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 {I|L}Q{I|L}Y 3.5473 - 124 1 1.938 83540.2 1.0 4637 4410 9039 SUDHL4_400M_050219_1,9049 SUDHL4_400M_050219_1,9049,IQPGRGFVLY False True IQPGRGFVLY 49.020565 575.324023425579 10332882.0 9039.0 ENST00000526368.1_1_11:62530297-62533976:+|nuORF;;ENSG00000168002|ENST00000301788|POLR2G;;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 5.18626880645752 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9050 49.029 477.0 125560.0 25 0 29295.0 21025 LNWWRRRKAR 10 89 721.4216943996696 1440.8288358661391 2 721.4214965701103 MULTI CID FTMS 0 0 0 9039 169069.0625 0.6664983443825887 -1 0.1209487915039062 11 Unmodified _LNWWRRRKAR_ ENSG00000171714|ENST00000324559|ANO5 0.4007161486938917 0.7247829448918255 5 {M(Oxidation (M))|F} 1 10 3.0989 0.0 0.0 0.21508 0.0 0.0 1066.635121892589 224.1042574518188 1290.7393793444078 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.21508 - 10 + 1 1.938 58596.1 1.0 4638 4410 9039 SUDHL4_400M_050219_1,9050 SUDHL4_400M_050219_1,9050,LNWWRRRKAR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9051 49.043 800.0 132800.0 25 0 26604.0 + -1 VLCIIIVQFRH 11 113 699.4088777284184 1396.8032025236366 2 699.4100219607353 MULTI CID FTMS 0 0 0 -1 0 12 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))IIIVQFRH_ REV__chr12:110661448-110688625|40|10.35|0.61|4.09|-|ENST00000439744|HVCN1,HVCN1;REV__ENSG00000122986|ENST00000242607|HVCN1;REV__nc|ENSG00000122986|Q96D96-3|HVCN1;REV__nc|ENSG00000122986|Q96D96-4|HVCN1 1.4819007175156935 0.86815623132643 5 {M(Oxidation (M))|F} 1 -1 9.2694 0.0 0.0 0.66361 0.0 0.0 1231.7235038925803 0.0 1231.7235038925803 0.0 7.486623204039747 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.66361 + + 98 + 1 1.938 92500.7 0.6499999761581421 4639 4410 9039 SUDHL4_400M_050219_1,9051 SUDHL4_400M_050219_1,9051,VLCIIIVQFRH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9052 49.052 491.0 259540.0 25 0 12693.0 + 20548 RQLEDILSTY 10 125 619.3244319075086 1236.634310881817 2 619.3248168826103 MULTI CID FTMS 0 0 0 9039 128161.1171875 1.0 0 0.0 13 Unmodified _LLLWGEKDTY_ ENSG00000084652|ENST00000373610|TXLNA 18.1463463914782 0.5430639438673815 5 {[QV]|[N{I|L}]|[RA]|[KV]}V[WE]{I|L}{I|L}STY 10 6 + 38.751 0.0 0.0 3.1336 3.1336 54.4 0.0 0.0 0.0 7.420299789533402 23.26660305958029 7.420299789533402 0.0 0 0.7429928190999391 1.0457574905606752 0.5 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V[WE]{I|L}{I|L}STY;{[QV]|[N{I|L}]|[RA]|[KV]}M[WP]{I|L}{I|L}STY;{[QV]|[N{I|L}]|[RA]|[KV]}[W{I|L}]D{I|L}{I|L}STY;{I|L}{I|L}{[WN]|[YH]}D{I|L}{I|L}STY;{[VA]|[{I|L}G]}GM[WP]{I|L}{I|L}STY;{[VA]|[{I|L}G]}GV[WE]{I|L}{I|L}STY;{[VA]|[{I|L}G]}G[W{I|L}]D{I|L}{I|L}STY;[Q{I|L}]{[RE]|[WV]}D{I|L}{I|L}STY;AAV{[RE]|[WV]}D{I|L}{I|L}STY;AA{[ES]|[DT]|[{I|L}C]}[WP]{I|L}{I|L}STY 3.1336;3.1336;3.0552;2.4392;1.6495;1.6495;1.5711;1.5613;1.0981;0.93769 -;-;-;-;-;-;-;-;-;- 296 1 1.938 96418.6 1.0 4640 4410 9039 SUDHL4_400M_050219_1,9052 SUDHL4_400M_050219_1,9052,LLLWGEKDTY False False RQLEDILSTY 49.051511 619.32481688261 843381.625 9039.0 ENSG00000084652|ENST00000373610|TXLNA 2.312291940053304 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9053 49.065 800.0 182290.0 25 0 11619.0 -1 0 103 807.4026502275096 3225.5814950436384 4 807.9038574099541 MULTI CID FTMS 0 0 0 9039 101363.3984375 0.7478249727891046 -1 0.1209487915039062 14 5 {I|L}NP{[QV]|[N{I|L}]|[RA]|[KV]} 5 -1 26.739 0.0 0.0 0.82897 0.0 0.0 2656.318825439748 0.0 2656.318825439748 0.0 13.551434250963936 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.3807196863200844 {I|L}NP{[QV]|[N{I|L}]|[RA]|[KV]} 0.82897 - 759 1 1.938 105521.4 0.5600000023841858 4641 4410 9039 SUDHL4_400M_050219_1,9053 SUDHL4_400M_050219_1,9053, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9054 49.076 597.0 107590.0 25 0 10952.0 + 20302 LLEEVSGWMDP 11 90 638.301961798317 1274.589370663434 2 638.3026611208916 MULTI CID FTMS 0 0 0 9039 102212.8359375 1.0 0 0.0 15 Unmodified _LLEEVSGWMDP_ REV__ENSG00000198286|ENST00000396946|CARD11 12.240655878213236 0.7805268987462184 5 {I|L}{I|L}E 3 -1 30.942 0.0 0.0 2.4276 0.0 0.0 0.0 916.3555199156402 916.3555199156402 18.15552802072581 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {I|L}{I|L}E 2.4276 + + 121 1 1.938 54955.9 1.0 4642 4410 9039 SUDHL4_400M_050219_1,9054 SUDHL4_400M_050219_1,9054,LLEEVSGWMDP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9055 49.087 538.0 137340.0 25 0 9494.0 + 14379 IFDKALHSI 9 126 522.2971417213272 1042.5797305094543 2 522.2974120974541 MULTI CID FTMS 0 0 0 9039 98670.75 1.0 0 0.0 16 Unmodified _IFDKALHSI_ REV__ENSG00000147613|ENST00000276616|PSKH2 16.942295170755138 0.3780752226737986 5 Q 1 -1 14.604 0.0 0.0 1.4008 0.0 0.0 896.510499407695 0.0 896.510499407695 0.0 0.0849096870940169 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 1.4008 - 89 + 1 1.938 63988.7 1.0 4643 4410 9039 SUDHL4_400M_050219_1,9055 SUDHL4_400M_050219_1,9055,IFDKALHSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9056 49.101 800.0 113040.0 25 0 16668.0 29571 QLRAKRPEVP 10 113 597.3581850424032 1192.7018171516063 2 597.3586913943291 MULTI CID FTMS 0 0 0 9039 81568.7265625 0.2130506714991468 2 -0.2689476013183594 17 Unmodified _QLRAKRPEVP_ ENSG00000140382|ENST00000336216|HMG20A 6.2057823575117 0.6979311171683138 5 {M(Oxidation (M))|F} 1 10 10.485 0.0 0.0 0.87906 0.0 0.0 1027.6226678369562 0.0 1027.6226678369562 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.87906 - 33 + 1 1.938 72983.7 0.4799999892711639 4644 4410 9039 SUDHL4_400M_050219_1,9056 SUDHL4_400M_050219_1,9056,QLRAKRPEVP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9057 49.105 216.0 360150.0 25 0 119530.0 -1 0 88 398.193491555939 397.186215089339 1 398.1939575076103 MULTI CID FTMS 0 0 0 9039 240816.078125 0.9174313898069482 -1 0.1209487915039062 18 5 {I|L} 1 -1 11.259 0.0 0.0 2.8347 0.0 0.0 266.0910593049624 0.0 266.0910593049624 0.0 7.077847484878779 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.8347 - 8 + 1 1.938 65660.0 1.0 4645 4410 9039 SUDHL4_400M_050219_1,9057 SUDHL4_400M_050219_1,9057, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9058 49.107 58.0 955640.0 25 0 210870.0 + 204 AAQLLKRRH 9 62 546.840286308936 1091.666019684672 2 546.8411743044853 MULTI CID FTMS 0 0 0 9039 169747.6875 0.1022682780490953 -1 0.1209487915039062 19 Unmodified _AAQLLKRRH_ REV__ENSG00000064999|ENST00000360359|ANKS1A 0.6014990680409731 0.8936861360942873 5 P 1 -1 0.3786 0.0 0.0 0.034681 0.0 0.0 893.5477163172876 98.03794275455311 991.5856590718408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.034681 - 6 + 1 1.938 49376.1 1.0 4646 4410 9039 SUDHL4_400M_050219_1,9058 SUDHL4_400M_050219_1,9058,AAQLLKRRH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9059 49.114 392.0 108970.0 25 0 23173.0 + -1 ELLCRPRRLTK 11 77 481.283689698257 1440.829239694971 3 481.2841064333916 MULTI CID FTMS 0 0 0 9039 117077.359375 0.7692457974553227 -1 0.1209487915039062 20 Carbamidomethyl (C) _ELLC(Carbamidomethyl (C))RPRRLTK_ REV__ENSG00000091592|ENST00000572272|NLRP1;REV__ENST00000571307.1_1_17:5433304-5487319:-|nuORF;REV__nc|ENSG00000091592|Q9C000-2|NLRP1;REV__nc|ENSG00000091592|Q9C000-3|NLRP1;REV__nc|ENSG00000091592|Q9C000-4|NLRP1;REV__nc|ENSG00000091592|Q9C000-5|NLRP1 1.4551175022131473 0.8682825962816412 5 H 1 -1 11.783 0.0 0.0 0.81777 0.0 0.0 1285.7594592768053 0.0 1285.7594592768053 0.0 1.6016757542968385 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.81777 - 36 + 1 1.938 44011.4 1.0 4647 4410 9039 SUDHL4_400M_050219_1,9059 SUDHL4_400M_050219_1,9059,ELLCRPRRLTK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9061 49.132 800.0 89192.0 25 0 11515.0 + 13289 HIRKHQALHSL 11 106 670.3873393984784 1338.760125863757 2 670.3885375857353 MULTI CID FTMS 0 0 0 9060 129358.734375 0.4497176363301947 2 -0.2659988403320312 1 Unmodified _HIRKHQALHSL_ REV__ENSG00000197360|ENST00000357774|ZNF98;REV__ENSG00000229676|ENST00000456783|ZNF492 6.2057823575117 0.8458686499021061 5 {I|L} 1 -1 12.218 0.0 0.0 0.91267 0.0 0.0 1207.6654125842629 0.0 1207.6654125842629 0.0 2.9491276745547523 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.91267 + + 52 + 1 1.94 60278.3 0.7699999809265137 4648 4411 9060 SUDHL4_400M_050219_1,9061 SUDHL4_400M_050219_1,9061,HIRKHQALHSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9062 49.134 119.0 1117600.0 25 0 159020.0 + 41311 VPIDIGRIKV 10 89 555.3537646737367 1108.6929764142733 2 555.3538696169853 MULTI CID FTMS 0 0 0 9060 746383.75 1.0 0 0.0 2 Unmodified _VPIDIGRIKV_ REV__ENSG00000105851|ENST00000496166|PIK3CG 3.944395688203298 0.708391353636983 5 {M(Oxidation (M))|F}{I|L}G 3 -1 16.198 0.0 0.0 1.461 0.0 0.0 244.2428641325659 544.2536719325998 788.4965360651656 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}G 1.461 - 65 + 1 1.94 102697.6 1.0 4649 4411 9060 SUDHL4_400M_050219_1,9062 SUDHL4_400M_050219_1,9062,VPIDIGRIKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9063 49.148 800.0 211240.0 25 0 73279.0 44301 YLLRKRLRG 9 122 587.8798921826581 1173.745231432116 2 587.8799316287041 MULTI CID FTMS 0 0 0 9060 306378.90625 1.0 0 0.0 3 Unmodified _YLLRKRLRG_ ENSG00000170324|ENST00000374201|FRMPD2;ENST00000486151.5_1_10:49420141-49482610:-|nuORF;nc|ENSG00000170324|Q68DX3-2|FRMPD2;nc|ENSG00000170324|Q68DX3-3|FRMPD2 2.302733041254933 0.8342969208511092 5 Y{I|L}D 3 7 14.693 0.0 0.0 1.2518 0.0 0.0 128.26654598465353 651.2780245416624 779.544570526316 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}D 1.2518 - 55 + 1 1.94 128353.9 0.949999988079071 4650 4411 9060 SUDHL4_400M_050219_1,9063 SUDHL4_400M_050219_1,9063,YLLRKRLRG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9064 49.153 240.0 282610.0 25 0 30514.0 + 1800 ALSQDIPEI 9 102 493.2632077850596 984.5118626369192 2 493.2637512087822 MULTI CID FTMS 0 0 0 9060 283189.28125 1.0 0 0.0 4 Unmodified _ALSQDIPEI_ ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4 48.345845343767074 0.0439967357579942 5 [{I|L}A]D[SG]A{I|L} 7 5 35.551 0.0 0.0 3.611 0.0 0.0 0.0 354.1635099360005 354.1635099360005 3.20657550806132 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.1861818737241734 0.0 [{I|L}A]D[SG]A{I|L} 3.611 - 255 1 1.94 56080.2 1.0 4651 4411 9060 SUDHL4_400M_050219_1,9064 SUDHL4_400M_050219_1,9064,ALSQDIPEI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9065 49.167 800.0 195510.0 25 0 61736.0 14721 IKKVPVPPKSV 11 127 596.3931518910974 1190.7717508489948 2 596.3931152224541 MULTI CID FTMS 0 0 0 9060 278997.96875 1.0 0 0.0 5 Unmodified _IKKVPVPPKSV_ ENSG00000008196|ENST00000393655|TFAP2B;nc|ENSG00000008196|Q92481-2|TFAP2B 2.735195868890462 0.8622431031272658 5 {M(Oxidation (M))|F} 1 11 9.3323 0.0 0.0 0.78372 0.0 0.0 1025.6925557579775 0.0 1025.6925557579775 0.0 0.1836140351236981 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.78372 - 52 + 1 1.94 117815.5 0.8999999761581421 4652 4411 9060 SUDHL4_400M_050219_1,9065 SUDHL4_400M_050219_1,9065,IKKVPVPPKSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9066 49.175 490.0 353290.0 25 0 41088.0 + 18348 KVLGIVVGV 9 132 442.3021769048319 882.5898008764639 2 442.3024474978447 MULTI CID FTMS 0 0 0 9060 271383.8125 0.8145398712010791 -1 0.1246719360351562 6 Unmodified _KVLGIVVGV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 64.23631603340823 0.0237365939569086 5 [VG]{I|L}{I|L}KVVGV 9 3 + 84.875 0.0 0.0 9.6166 9.6166 90.039 0.0 0.0 0.0 3.521825181113627 16.478174818886373 3.521825181113627 3.521825181113627 0 1.6549471895720984 1.6989700043360187 0.0 0.2742275032520141 [VG]{I|L}{I|L}KVVGV;VVA{I|L}KVVGV;[VG]{I|L}K{I|L}VVGV;VVAK{I|L}VVGV;[VG]{I|L}{I|L}VKVGV;[VG]{I|L}VK{I|L}VGV;[VG]{I|L}V{I|L}KVGV;VVA{I|L}VKVGV;VVAVK{I|L}VGV;[VG]V{I|L}K{I|L}VGV 9.6166;9.2176;8.5354;8.1364;8.0023;7.9366;7.6612;7.6032;7.5375;7.3201 -;-;-;-;-;-;-;-;-;- 1039 1 1.94 134055.3 1.0 4653 4411 9060 SUDHL4_400M_050219_1,9066 SUDHL4_400M_050219_1,9066,KVLGIVVGV True True KVLGIVVGV 49.175302 442.302447497845 2779395.5 9060.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 6.407477537790935 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9067 49.189 800.0 126640.0 25 0 22116.0 + 22852 LRYRSRPRLEL 11 121 729.9351019231746 1457.855650913149 2 729.9359619021416 MULTI CID FTMS 0 0 0 9060 174468.84375 1.0 0 0.0 7 Unmodified _LRYRSRPRLEL_ REV__ENSG00000117400|ENST00000372470|MPL;REV__nc|ENSG00000117400|P40238-2|MPL 5.731851221503515 0.8481046878870278 5 {[QN]|[E{I|L}]|[KN]}N{I|L}TV 6 -1 32.664 0.0 0.0 2.2406 0.0 0.0 0.0 785.4480330755115 785.4480330755115 19.73571731886692 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.5387254899964358 {[QN]|[E{I|L}]|[KN]}N{I|L}TV 2.2406 - 338 1 1.94 84444.7 0.6600000262260437 4654 4411 9060 SUDHL4_400M_050219_1,9067 SUDHL4_400M_050219_1,9067,LRYRSRPRLEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9068 49.197 380.0 256430.0 25 0 29493.0 + 40811 VLLSTIHEL 9 97 512.8059920977907 1023.5974312623816 2 512.8062011599541 MULTI CID FTMS 0 0 0 9060 132098.15625 0.7557198684408358 -1 0.1246719360351562 8 Unmodified _VLLSTIHEL_ ENSG00000163634|ENST00000295899|THOC7 57.47134341890925 0.0274820932774257 5 V{I|L}{I|L}{M(Oxidation (M))|F}{I|L}RTY 8 5 + 75.035 0.0 0.0 7.3305 7.3305 86.07 0.0 0.0 0.0 32.48433080573 2.066755429656169 2.066755429656169 2.066755429656169 0 0.4247425010840047 2.0 0.8494850021680094 0.0 V{I|L}{I|L}{M(Oxidation (M))|F}{I|L}RTY;V{I|L}{I|L}ST{I|L}{[QN]|[E{I|L}]|[KN]}H;V{I|L}{I|L}{M(Oxidation (M))|F}{I|L}[VG]TY;V{I|L}{I|L}{M(Oxidation (M))|F}{I|L}S[VP]H;V{I|L}{I|L}[YR][{M(Oxidation (M))|F}T]{I|L};V{I|L}{I|L}ST[PG][QP]{I|L};V{I|L}{I|L}{[DA]|[EG]}R[QP]{I|L};V{I|L}{I|L}[C(Carbamidomethyl (C))K][RV]H;V{I|L}[C(Carbamidomethyl (C))K][K{I|L}]TY;V{I|L}{I|L}Y[{I|L}A][VP]H 7.3305;7.1286;6.4257;6.3405;5.4967;5.3093;4.6712;3.8335;3.7454;3.6788 -;-;-;-;-;-;-;-;-;- 651 + 1 1.94 78675.9 1.0 4655 4411 9060 SUDHL4_400M_050219_1,9068 SUDHL4_400M_050219_1,9068,VLLSTIHEL True True VLLSTIHEL 49.197435 512.806201159954 1300331.625 9060.0 ENSG00000163634|ENST00000295899|THOC7 4.771717389424642 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9069 49.211 800.0 81936.0 25 0 19322.0 43382 WQIRTVKLIRY 11 97 738.4482676946906 1474.881982456181 2 738.4493896365166 MULTI CID FTMS 0 0 0 9060 114223.8046875 1.0 0 0.0 9 Unmodified _WQIRTVKLIRY_ ENSG00000107593|ENST00000318222|PKD2L1;nc|ENSG00000107593|Q9P0L9-2|PKD2L1;nc|ENSG00000107593|Q9P0L9-3|PKD2L1;nc|ENSG00000107593|Q9P0L9-5|PKD2L1 0.3506318815782774 0.8734936314171269 5 K 1 10 3.9794 0.0 0.0 0.26981 0.0 0.0 972.583839000906 371.1708162897094 1343.7546552906156 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.26981 + + 8 + 1 1.94 54877.9 0.5 4656 4411 9060 SUDHL4_400M_050219_1,9069 SUDHL4_400M_050219_1,9069,WQIRTVKLIRY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9070 49.225 800.0 121890.0 25 0 12346.0 + 14684 TQLGPPYHIL 10 138 569.3699446877245 1136.7253364422488 2 569.3707763552666 MULTI CID FTMS 0 0 0 9060 102575.2265625 1.0 0 0.0 10 Unmodified _IISRLLVIPN_ ENSG00000119616|ENST00000341162|FCF1 3.5964929083625545 0.7100006075494749 5 [QT]{I|L}[W{I|L}]PG{I|L} 8 8 19.557 0.0 0.0 1.7204 0.0 0.0 0.0 225.19144703504847 225.19144703504847 6.792342430118559 0.0 0.0 0.0 0 0.0 0.4814860601221125 0.3807196863200844 0.0 [QT]{I|L}[W{I|L}]PG{I|L} 1.7204 - 211 1 1.94 78087.7 0.4699999988079071 4657 4411 9060 SUDHL4_400M_050219_1,9070 SUDHL4_400M_050219_1,9070,IISRLLVIPN False False TQLGPPYHIL 49.225116 569.370776355267 174734.15625 9060.0 ENSG00000119616|ENST00000341162|FCF1 3.036357561747233 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9071 49.236 578.0 164990.0 25 0 25383.0 + 37162 TIAQLVHAV 9 133 476.2853398872245 0 476.2864257693291 PEAK CID FTMS 0 0 0 9060 97533.5703125 1.0 0 0.0 11 Unmodified _TIAQLVHAV_ ENSG00000160208|ENST00000340648|RRP1B;nc|ENSG00000160208|Q14684-2|RRP1B 23.1484247019978 0.1725298825155634 5 AQ{I|L}[HT]T 6 5 17.934 0.0 0.0 1.8866 0.0 0.0 214.1339919695708 82.06688867740468 296.20088064697546 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.5269763493273799 0.0 AQ{I|L}[HT]T 1.8866 - 142 + 1 1.94 77694.5 1.0 4658 4411 9060 SUDHL4_400M_050219_1,9071 SUDHL4_400M_050219_1,9071,TIAQLVHAV False True TIAQLVHAV 49.236406 476.286425769329 708446.25 9060.0 nc|ENSG00000160208|Q14684-2|RRP1B;;ENSG00000160208|ENST00000340648|RRP1B 5.747245947519938 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9072 49.25 800.0 74560.0 25 0 11643.0 -1 0 65 1076.2015179575287 3225.582724472786 3 1076.871630847454 MULTI CID FTMS 0 0 0 9060 92752.953125 1.0 0 0.0 12 5 YR 2 -1 7.0783 0.0 0.0 0.21944 0.0 0.0 2239.0079086542305 664.4049166315061 2903.4128252857367 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YR 0.21944 - 61 + 1 1.94 46505.9 0.4199999868869781 4659 4411 9060 SUDHL4_400M_050219_1,9072 SUDHL4_400M_050219_1,9072, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9073 49.259 469.0 259940.0 25 0 36474.0 4840 DFKRQLRTVT 10 93 632.362053162152 1262.709553391104 2 632.3622314333916 MULTI CID FTMS 0 0 0 9060 111938.828125 0.3918049744421931 -2 0.2456207275390625 13 Unmodified _DFKRQLRTVT_ ENSG00000198919|ENST00000361582|DZIP3;ENST00000495008.5_1_3:108373019-108406879:+|nuORF 3.2813086475875832 0.7114585191678878 5 E 1 10 1.9897 0.0 0.0 0.15757 0.0 0.0 520.3081663461063 610.3487006407719 1130.6568669868782 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.15757 - 14 + 1 1.94 97833.0 1.0 4660 4411 9060 SUDHL4_400M_050219_1,9073 SUDHL4_400M_050219_1,9073,DFKRQLRTVT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9075 49.263 28.0 2153100.0 25 0 491730.0 24054 LWVWLVFL 8 66 538.3219697679343 1074.6293866026683 2 538.3276244997978 MULTI CID FTMS 0 0 0 9074 2111723.75 1.0 0 0.0 1 Unmodified _LWVWLVFL_ ENST00000395491.6_1_17:21218170-21218272:+|nuORF 0.7936320650641473 0.8195151834710337 5 {I|L} 1 7 10.596 0.0 0.0 0.98601 0.0 0.0 943.5342460770812 0.0 943.5342460770812 0.0 -10.37316809148452 -10.37316809148452 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.98601 + + 3 + 1 1.94 53204.6 1.0 4661 4412 9074 SUDHL4_400M_050219_1,9075 SUDHL4_400M_050219_1,9075,LWVWLVFL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9076 49.266 115.0 517740.0 25 0 57467.0 + 9506 FLDSEVSEL 9 90 519.752906407922 1037.4912598826438 2 519.7532226443291 MULTI CID FTMS 0 0 0 9074 454096.9375 0.3712533718133521 1 -0.1217231750488281 2 Unmodified _FLDSEVSEL_ ENSG00000109805|ENST00000251496|NCAPG 36.04419817259434 0.0971720506436186 5 {[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}E 5 5 20.898 0.0 0.0 2.0143 0.0 0.0 0.0 443.2153559121938 443.2153559121938 6.293709283484077 0.0 0.0 0.0 0 0.0 0.0 1.416386562212267 0.0 {[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}E 2.0143 - 176 1 1.94 50567.9 1.0 4662 4412 9074 SUDHL4_400M_050219_1,9076 SUDHL4_400M_050219_1,9076,FLDSEVSEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9077 49.267 60.0 960420.0 25 0 95254.0 11899 GLWEEAYRV 9 87 561.7845668518446 1121.554580770489 2 561.7839843630791 MULTI CID FTMS 0 0 0 9074 456564.96875 0.8277682039464783 -1 0.1442756652832031 3 Unmodified _GLWEEAYRV_ ENSG00000138002|ENST00000260570|IFT172;nc|ENSG00000138002|Q9UG01-2|IFT172 22.736283301280096 0.2418982879461534 5 [{I|L}T][RH]EEW 7 7 43.464 0.0 0.0 3.8754 0.0 0.0 0.0 167.08639309861852 167.08639309861852 18.503731634096056 0.0 0.0 0.0 0 0.1923877696554315 2.0 0.3252574989159953 0.3807196863200844 [{I|L}T][RH]EEW 3.8754 - 232 1 1.94 47521.8 1.0 4663 4412 9074 SUDHL4_400M_050219_1,9077 SUDHL4_400M_050219_1,9077,GLWEEAYRV False True TLLEDGTFKV 49.267263 561.783984363079 2152034.0 9074.0 ENST00000575002.5_1_16:4517092-4524613:-|nuORF;;ENSG00000153406|ENST00000283429|NMRAL1 2.3819627364476523 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9078 49.27 157.0 254260.0 25 0 78925.0 26555 NVIVIFFIEFI 11 60 677.3953084722584 1352.7760640113167 2 677.3958618044853 MULTI CID FTMS 0 0 0 9074 448686.125 0.4482713339313217 3 -0.3191604614257812 4 Unmodified _NVIVIFFIEFI_ ENSG00000169777|ENST00000382492|TAS2R1 1.1933415558491238 0.8695176722560516 5 R 1 11 5.4846 0.0 0.0 0.40543 0.0 0.0 538.338333153698 655.3227633111936 1193.6610964648917 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.40543 - 2 + 1 1.94 46590.1 1.0 4664 4412 9074 SUDHL4_400M_050219_1,9078 SUDHL4_400M_050219_1,9078,NVIVIFFIEFI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9079 49.276 316.0 188120.0 25 0 50374.0 23286 LSWWLLLAGRR 11 70 685.9088898580812 0 685.9089843630791 PEAK CID FTMS 0 0 0 9074 256131.828125 0.3209670774721658 3 -0.3191604614257812 5 Unmodified _LSWWLLLAGRR_ ENST00000511799.5_3_5:60095008-60139355:-|nuORF 1.1933415558491238 0.4761840153648598 5 K 1 11 1.5938 0.0 0.0 0.11635 0.0 0.0 955.5566885522968 283.1185091608032 1238.6751977131 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.11635 - 3 + 1 1.94 59944.5 1.0 4665 4412 9074 SUDHL4_400M_050219_1,9079 SUDHL4_400M_050219_1,9079,LSWWLLLAGRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9080 49.279 164.0 329390.0 25 0 44576.0 + 8929 FAMDVYKNL 9 92 550.7757764776403 1099.5370000220803 2 550.7759277224541 MULTI CID FTMS 0 0 0 9074 252359.015625 1.0 0 0.0 6 Unmodified _FAMDVYKNL_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 49.93300154707207 0.0405168250806675 5 {[MS]|[{M(Oxidation (M))|F}A]}MDVYKN{I|L} 9 0 + 50.421 0.0 0.0 4.5857 4.5857 87.43 0.0 0.0 0.0 29.8780761391644 10.467947896998083 10.467947896998083 12.09544243948811 0 0.9247425010840048 0.0 0.0 0.6382104921644451 + + {[MS]|[{M(Oxidation (M))|F}A]}MDVYKN{I|L};{[MS]|[{M(Oxidation (M))|F}A]}MDVYKGG{I|L};[KA]H{[TV]|[{I|L}S]}VDM{[CP]|[EA]};[YK]{[NV]|[RG]}[{M(Oxidation (M))|F}V]M{[CP]|[EA]};{NN|[MP]|[D{I|L}]|[EV]}K{[HG]|PP}{[TV]|[{I|L}S]}M{[CP]|[EA]} 4.5857;3.4856;2.0771;0.62477;0.33662 +;-;-;-;- + 235 + 1 1.94 48443.6 1.0 4666 4412 9074 SUDHL4_400M_050219_1,9080 SUDHL4_400M_050219_1,9080,FAMDVYKNL True True FAMDVYKNL 49.279389 550.775927722454 1684641.0 9074.0 ENST00000518442.5_1_8:109247181-109261015:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 7.53412373860677 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9081 49.285 324.0 137860.0 25 0 27435.0 + 20523 LLLQLLFQWLT 11 92 694.4220137590355 1386.829474584871 2 694.4227783083916 MULTI CID FTMS 0 0 0 9074 252174.1875 0.2617809257451483 3 -0.3191604614257812 7 Unmodified _LLLQLLFQWLT_ REV__ENSG00000111145|ENST00000228741|ELK3 2.735195868890462 0.8622431031272658 5 R 1 -1 9.6041 0.0 0.0 0.69252 0.0 0.0 1212.7175036149474 0.0 1212.7175036149474 0.0 5.376937838380637 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.69252 - 50 + 1 1.94 43700.0 1.0 4667 4412 9074 SUDHL4_400M_050219_1,9081 SUDHL4_400M_050219_1,9081,LLLQLLFQWLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9082 49.291 304.0 285720.0 25 0 62455.0 + 34185 SLNGLEVHL 9 114 491.272027947485 980.52950296177 2 491.2722045779228 MULTI CID FTMS 0 0 0 9074 191957.109375 0.3499503556515653 -1 0.1442756652832031 8 Unmodified _SLNGLEVHL_ ENSG00000100099|ENST00000398145|HPS4;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000485842.5_1_22:26849853-26868905:-|nuORF;ENST00000493455.6_1_22:26840650-26860128:-|nuORF;nc|ENSG00000100099|Q9NQG7-3|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4 52.268347100219714 0.0353964759249114 5 {[TV]|[{I|L}S]}NG{I|L}EVH{I|L} 9 0 + 76.647 0.0 0.0 7.8169 7.8169 86.814 0.0 0.0 0.0 27.147642715192504 2.04119982655925 2.04119982655925 2.04119982655925 0 0.75 2.0 0.3807196863200844 0.4247425010840047 + + {[TV]|[{I|L}S]}NG{I|L}EVH{I|L};{[TV]|[{I|L}S]}NG{I|L}EV{I|L}H;{[TV]|[{I|L}S]}NG{I|L}{I|L}DH{I|L};{[TV]|[{I|L}S]}NG{I|L}{I|L}D{I|L}H;{[TV]|[{I|L}S]}GGG{I|L}EVH{I|L};{[TV]|[{I|L}S]}GGG{I|L}EV{I|L}H;{[TV]|[{I|L}S]}GGG{I|L}{I|L}DH{I|L};{[TV]|[{I|L}S]}GGG{I|L}{I|L}D{I|L}H;{[TV]|[{I|L}S]}NG{I|L}[NP][PG]{I|L};{[VA]|[{I|L}G]}NPP{[RE]|[WV]}[KA] 7.8169;7.6087;7.0767;6.8685;6.4446;6.2365;5.7044;5.4963;4.0906;0.36704 +;-;-;-;-;-;-;-;-;- + 372 + 1 1.94 69276.4 1.0 4668 4412 9074 SUDHL4_400M_050219_1,9082 SUDHL4_400M_050219_1,9082,SLNGLEVHL True True SLNGLEVHL 49.290845 491.272204577923 2671075.25 9074.0 ENST00000493455.6_1_22:26840650-26860128:-|nuORF;;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;;nc|ENSG00000100099|Q9NQG7-4|HPS4;;nc|ENSG00000100099|Q9NQG7-3|HPS4;;ENST00000485842.5_1_22:26849853-26868905:-|nuORF;;ENSG00000100099|ENST00000398145|HPS4 7.802134195963542 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9083 49.297 350.0 196980.0 25 0 20730.0 -1 LFSSILRSLMI 11 91 648.3741757855594 1294.7337986379189 2 648.3738281130791 MULTI CID FTMS 0 0 0 9074 192587.03125 0.6696152278183711 -2 0.2689476013183594 9 Oxidation (M) _LFSSILRSLM(Oxidation (M))I_ ENST00000543469.1_1_3:160156382-160156421:-|nuORF 2.9952420565917617 0.861016188266951 5 {I|L} 1 -1 10.379 0.0 0.0 0.8016 0.0 0.0 1163.6388107002217 0.0 1163.6388107002217 0.0 0.3786035696905898 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.8016 + + 30 + 1 1.94 59546.9 1.0 4669 4412 9074 SUDHL4_400M_050219_1,9083 SUDHL4_400M_050219_1,9083,LFSSILRSLMI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9084 49.301 219.0 330490.0 25 0 20422.0 1443 ALEFLLWL 8 127 502.7922512631642 1003.5699495931284 2 502.7923461794853 MULTI CID FTMS 0 0 0 9074 142076.375 0.0474466945761514 3 -0.3191604614257812 10 Unmodified _ALEFLLWL_ ENSG00000154914|ENST00000285199|USP43;nc|ENSG00000154914|Q70EL4-4|USP43 15.768221252438446 0.6779680726941459 5 [{I|L}A]{M(Oxidation (M))|F}E 4 5 36.682 0.0 0.0 3.6552 0.0 0.0 0.0 540.3153429426344 540.3153429426344 6.391981519752218 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}A]{M(Oxidation (M))|F}E 3.6552 - 295 + 1 1.94 57121.6 1.0 4670 4412 9074 SUDHL4_400M_050219_1,9084 SUDHL4_400M_050219_1,9084,ALEFLLWL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9085 49.315 800.0 168510.0 25 0 16598.0 + 19376 LERIRQEQKL 10 111 656.8877549772877 1311.7609570213754 2 656.8878051638603 MULTI CID FTMS 0 0 0 9074 145312.234375 0.5697342172765663 -1 0.1442756652832031 11 Unmodified _LERIRQEQKL_ REV__ENSG00000180376|ENST00000394672|CCDC66;REV__ENST00000468108.1_1_3:56627740-56649353:+|nuORF;REV__nc|ENSG00000180376|A2RUB6-3|CCDC66 3.5964929083625545 0.7100006075494749 5 {I|L} 1 -1 10.089 0.0 0.0 0.76909 0.0 0.0 1180.6664573649284 0.0 1180.6664573649284 0.0 0.756338376653245 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.76909 + + 51 + 1 1.94 106359.7 0.6399999856948853 4671 4412 9074 SUDHL4_400M_050219_1,9085 SUDHL4_400M_050219_1,9085,LERIRQEQKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9086 49.325 533.0 162710.0 25 0 18889.0 + 14631 IIIPEIQKV 9 102 526.839369196946 1051.664185460692 2 526.8396484255791 MULTI CID FTMS 0 0 0 9074 127305.703125 0.2211212160687824 2 -0.2214851379394531 12 Unmodified _IIIPEIQKV_ ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;nc|ENSG00000124207|P55060-3|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L 27.628801355627647 0.1796483985696185 5 {I|L}{I|L}{I|L}PE{I|L}QKV 9 0 + 44.606 0.0 0.0 4.2415 4.2415 79.101 0.0 0.0 0.0 6.682216080411187 3.38818556553381 3.38818556553381 3.38818556553381 0 0.5 1.6989700043360187 0.0 0.0 + + {I|L}{I|L}{I|L}PE{I|L}QKV;{I|L}{I|L}{I|L}PE{I|L}QVK;{I|L}{I|L}{I|L}PE{I|L}[AG]KV;{I|L}{I|L}{I|L}PE{I|L}[AG]VK;{I|L}{I|L}{I|L}WRRPV 4.2415;3.9193;3.3659;3.0438;2.369 +;-;-;-;- + 348 + 1 1.94 72746.0 1.0 4672 4412 9074 SUDHL4_400M_050219_1,9086 SUDHL4_400M_050219_1,9086,IIIPEIQKV False True IIIPEIQKV 49.324534 526.839648425579 11271766.0 9074.0 ENSG00000124207|ENST00000262982|CSE1L;;nc|ENSG00000124207|P55060-4|CSE1L;;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;;nc|ENSG00000124207|P55060-3|CSE1L 3.98881737391154 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9087 49.338 800.0 197840.0 25 0 22826.0 19860 LHLQLSLHQKL 11 127 665.4013779946072 1328.7882030560145 2 665.4011108279228 MULTI CID FTMS 0 0 0 9074 111574.890625 0.5349287672369892 -1 0.1442756652832031 13 Unmodified _LHLQLSLHQKL_ ENSG00000128000|ENST00000434248|ZNF780B 9.38312468134398 0.8308777417566128 5 {I|L} 1 10 9.2694 0.0 0.0 0.69758 0.0 0.0 1197.6929404601142 0.0 1197.6929404601142 0.0 5.813747271245011 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.69758 + + 73 + 1 1.94 123048.2 0.5799999833106995 4673 4412 9074 SUDHL4_400M_050219_1,9087 SUDHL4_400M_050219_1,9087,LHLQLSLHQKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9088 49.342 105.0 505720.0 25 0 44447.0 + 9663 FLVGERVTL 9 75 516.2969319426142 1030.5793109520282 2 517.3038207888603 MULTI CID FTMS 0 0 0 9074 115456.3515625 0.2869666526805564 -1 0.1442756652832031 14 Unmodified _FLPRVEGTL_ ENSG00000254772|ENST00000329251|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;nc|ENSG00000254772|P26641-2|EEF1G 15.847184025352805 0.4077185912009129 5 {I|L}VGE 4 6 17.167 0.0 0.0 1.6658 0.0 0.0 145.05344532878445 484.2910555475219 629.3445008763064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VGE 1.6658 - 83 + 1 1.94 44687.1 1.0 4674 4412 9074 SUDHL4_400M_050219_1,9088 SUDHL4_400M_050219_1,9088,FLPRVEGTL False False FLVGERVTL 49.342094 517.30382078886 2620919.5 9074.0 ENSG00000254772|ENST00000329251|EEF1G;;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;;nc|ENSG00000254772|P26641-2|EEF1G 5.703918933868408 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9089 49.356 800.0 145620.0 25 0 7407.7 + 11903 GLWRGEEVTL 10 153 580.3065797397603 1158.5986065463203 2 580.3072387576103 MULTI CID FTMS 0 0 0 9074 95481.9140625 1.0 0 0.0 15 Unmodified _GLWRGEEVTL_ ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12 33.4449034751529 0.2267874087365337 5 {[VA]|[{I|L}G]}[YV]EHEVT{I|L} 10 4 + 38.242 0.0 0.0 3.3007 3.3007 77.57 0.0 0.0 0.0 3.890960351139995 13.521825181113629 3.890960351139995 3.890960351139995 0 0.2887254899964357 1.3979400086720375 0.5 0.0 {[VA]|[{I|L}G]}[YV]EHEVT{I|L};{[QN]|[E{I|L}]|[KN]}A[KA]WEVT{I|L};[{I|L}V][YG]EHEVT{I|L};{[QN]|[E{I|L}]|[KN]}[YR]HEVT{I|L};{[VA]|[{I|L}G]}[WR]WEVT{I|L};{[VA]|[{I|L}G]}[YV]{M(Oxidation (M))|F}[{M(Oxidation (M))|F}T]VT{I|L};{[VA]|[{I|L}G]}[YV]EHTVE{I|L};[{I|L}V][WY]HEVT{I|L};{[QN]|[E{I|L}]|[KN]}A[KA]WTVE{I|L};{[QN]|[E{I|L}]|[KN]}A[KA]{[DA]|[EG]}EVT{I|L} 3.3007;2.9649;2.7893;2.787;2.6108;2.5454;2.5212;2.2255;2.1854;2.1739 -;-;-;-;-;-;-;-;-;- 676 1 1.94 92804.9 0.5199999809265137 4675 4412 9074 SUDHL4_400M_050219_1,9089 SUDHL4_400M_050219_1,9089,GLWRGEEVTL False True GLWRGEEVTL 49.355926 580.30723875761 348619.4375 9074.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12 2.87001367410024 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9090 49.361 246.0 256880.0 25 0 32713.0 + 20675 LLRGLPTESL 10 95 549.8294128176115 0 549.8298217654228 PEAK CID FTMS 0 0 0 9074 86815.34375 0.8947536239072398 -1 0.1442756652832031 16 Unmodified _LLRGLPTESL_ REV__ENST00000416464.6_1_17:15587136-15587415:-|nuORF 24.020572477871973 0.2658879206942018 5 {I|L}[HV]VYE{I|L} 7 -1 14.217 0.0 0.0 1.2953 0.0 0.0 113.08750629261164 128.0718935602172 241.15939985282887 0.0 0.0 0.0 0.0 0 0.6861818737241735 0.0 0.4247425010840047 0.0 {I|L}[HV]VYE{I|L} 1.2953 - 163 + 1 1.94 51793.5 1.0 4676 4412 9074 SUDHL4_400M_050219_1,9090 SUDHL4_400M_050219_1,9090,LLRGLPTESL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9091 49.374 800.0 56358.0 25 0 3439.2 -1 0 84 1040.167768651356 0 1040.503710925579 PEAK CID FTMS 0 0 0 -1 0 17 5 {I|L}ES{I|L}D 5 -1 26.331 0.0 0.0 1.2669 0.0 0.0 1056.8405289025184 461.1951998346313 1518.0357287371496 0.0 0.0 0.0 0.0 0 0.0 0.0 1.305462187404089 0.0 {I|L}ES{I|L}D 1.2669 - 726 + 1 1.94 38413.1 0.6100000143051147 4677 4412 9074 SUDHL4_400M_050219_1,9091 SUDHL4_400M_050219_1,9091, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9092 49.38 254.0 230880.0 25 0 20372.0 + 23015 LSIDESPPI 9 101 485.757749146479 969.500945359758 2 485.7570068240166 MULTI CID FTMS 0 0 0 9074 120544.03125 0.2723042181783219 12 -1.0953025817871094 18 Unmodified _LSIDESPPI_ REV__ENSG00000157423|ENST00000393567|HYDIN 30.22481116460888 0.1466181017706357 5 SPP{I|L} 4 -1 27.88 0.0 0.0 2.8757 0.0 0.0 557.2690513248575 0.0 557.2690513248575 0.0 18.483194886837406 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 SPP{I|L} 2.8757 + + 116 + 1 1.94 50891.4 1.0 4678 4412 9074 SUDHL4_400M_050219_1,9092 SUDHL4_400M_050219_1,9092,LSIDESPPI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9094 49.386 48.0 1396800.0 25 0 252210.0 + 205 AAQLLKRRH 9 75 546.840286308936 1091.666019684672 2 546.8405029177666 MULTI CID FTMS 0 0 0 9093 1082996.0 0.652475080428168 2 -0.1974372863769531 1 Unmodified _AAQLLKRRH_ REV__ENSG00000064999|ENST00000360359|ANKS1A 0.6014990680409731 0.8936861360942873 5 A 1 -1 9.3971 0.0 0.0 0.86081 0.0 0.0 1002.6172811366235 0.0 1002.6172811366235 0.0 3.9125802789304656 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.86081 + + 14 + 1 1.945 57330.5 1.0 4679 4413 9093 SUDHL4_400M_050219_1,9094 SUDHL4_400M_050219_1,9094,AAQLLKRRH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9095 49.388 98.0 570340.0 25 0 89879.0 + 24021 LVYKIFITL 9 84 555.3537646737367 1108.6929764142733 2 555.3538085818291 MULTI CID FTMS 0 0 0 9093 437778.9375 0.5865333181490084 2 -0.1974372863769531 2 Unmodified _LVYKIFITL_ REV__ENSG00000162298|ENST00000377190|SYVN1;REV__ENST00000449943.5_1_11:64897669-64899838:-|nuORF;REV__ENST00000529207.5_1_11:64898917-64899817:-|nuORF;REV__nc|ENSG00000162298|Q86TM6-2|SYVN1;REV__nc|ENSG00000162298|Q86TM6-3|SYVN1 4.75600775471527 0.7486543447549536 5 D{M(Oxidation (M))|F}Y 3 -1 13.812 0.0 0.0 1.2458 0.0 0.0 129.21807514649828 551.2933443658811 680.5114195123795 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{M(Oxidation (M))|F}Y 1.2458 - 47 + 1 1.945 48274.5 1.0 4680 4413 9093 SUDHL4_400M_050219_1,9095 SUDHL4_400M_050219_1,9095,LVYKIFITL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9096 49.389 16.0 3561900.0 25 0 218470.0 + 16926 KILDLETQL 9 105 536.816085288108 1071.6176176430158 2 536.8167602419853 MULTI CID FTMS 0 0 0 9093 2080799.875 1.0 0 0.0 3 Unmodified _KILDLETQL_ ENSG00000136811|ENST00000351030|ODF2;ENST00000488909.1_1_9:131260677-131262531:+|nuORF;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2 51.41523569358685 0.0372669606867193 5 {[QN]|[E{I|L}]|[KN]}VK{I|L}ETQ{I|L} 9 3 + 78.94 0.0 0.0 7.3665 7.3665 91.35 0.0 0.0 0.0 8.257108030787322 16.478174818886373 8.257108030787322 8.257108030787322 0 0.2887254899964357 0.744727494896694 1.7971062485323517 0.0 {[QN]|[E{I|L}]|[KN]}VK{I|L}ETQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}ETQ{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}ET[AG]{I|L};[K{I|L}]{I|L}D{I|L}ETQ{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}TEQ{I|L};{[QN]|[E{I|L}]|[KN]}D{I|L}[K{I|L}]TQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}ET[AG]{I|L};{[QN]|[E{I|L}]|[KN]}VE[K{I|L}]TQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}K{I|L}TEQ{I|L};[K{I|L}]{I|L}D{I|L}ET[AG]{I|L} 7.3665;6.5959;6.5072;6.1147;6.0484;5.7482;5.7367;5.6578;5.2779;5.2554 -;-;-;+;-;-;-;-;-;- + 637 1 1.945 48585.2 1.0 4681 4413 9093 SUDHL4_400M_050219_1,9096 SUDHL4_400M_050219_1,9096,KILDLETQL True True KILDLETQL 49.388848 536.816760241985 12234291.0 9093.0 ENST00000488909.1_1_9:131260677-131262531:+|nuORF;;nc|ENSG00000136811|Q5BJF6-4|ODF2;;nc|ENSG00000136811|Q5BJF6|ODF2;;ENSG00000136811|ENST00000351030|ODF2;;nc|ENSG00000136811|Q5BJF6-3|ODF2;;nc|ENSG00000136811|Q5BJF6-2|ODF2 3.9266344706217446 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9097 49.391 88.0 704280.0 25 0 36866.0 -1 0 83 881.4114268818424 1760.8083008304848 2 881.9064208865166 MULTI CID FTMS 0 0 0 9093 681018.875 0.0390185561036336 -8 1.052593231201172 4 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YE[{I|L}P] 16 -1 + 87.795 0.0 0.0 4.986 4.986 81.785 0.0 0.0 0.0 7.391143015546646 61.90404723492961 7.391143015546646 3.6991128507179374 0 0.0 1.3979400086720375 0.0 1.5044321917401078 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}GAQDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQW{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QAQDA{M(Oxidation (M))|F}YE[{I|L}P];[YQ]V[CS]AGAQDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGA[AG]DA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQW{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQDA{M(Oxidation (M))|F}YE[{I|L}P];[YQ]V[CS]AQQDA{M(Oxidation (M))|F}YE[{I|L}P] 4.986;4.776;4.605;4.605;4.605;4.5188;4.4741;4.396;4.396;4.3087 -;-;-;-;-;-;-;-;-;- 5656 1 1.945 49209.2 1.0 4682 4413 9093 SUDHL4_400M_050219_1,9097 SUDHL4_400M_050219_1,9097, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9098 49.393 118.0 445500.0 25 0 54819.0 + 40677 VLFENTDSVHL 11 67 637.3245907179479 1272.6346285026957 2 637.3252441287041 MULTI CID FTMS 0 0 0 9093 451957.9375 1.0 0 0.0 5 Unmodified _VLFENTDSVHL_ ENSG00000188739|ENST00000408888|RBM34;ENST00000495224.1_1_1:235295030-235299397:-|nuORF 57.72198328787511 0.0783903820882629 5 [{I|L}V]{M(Oxidation (M))|F}ENTDSV[H{I|L}] 11 0 + 95.789 0.0 0.0 7.5268 7.5268 95.979 0.0 0.0 0.0 81.09630757282244 7.367585652254192 7.367585652254192 17.6233482644911 0 0.4247425010840047 2.0 0.805462187404089 0.8494850021680094 + + [{I|L}V]{M(Oxidation (M))|F}ENTDSV[H{I|L}];[{I|L}V]{M(Oxidation (M))|F}EGGTDSV[H{I|L}];[{I|L}V]{M(Oxidation (M))|F}ENTD{[HG]|PP}{[QN]|[E{I|L}]|[KN]};[{I|L}V]{M(Oxidation (M))|F}EGGTD{[HG]|PP}{[QN]|[E{I|L}]|[KN]} 7.5268;6.142;5.6786;4.9613 +;-;-;- + 164 + 1 1.945 44039.0 1.0 4683 4413 9093 SUDHL4_400M_050219_1,9098 SUDHL4_400M_050219_1,9098,VLFENTDSVHL True True VLFENTDSVHL 49.393286 637.325244128704 3328781.5 9093.0 ENSG00000188739|ENST00000408888|RBM34;;ENST00000495224.1_1_1:235295030-235299397:-|nuORF 8.04761028289795 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9099 49.397 171.0 273400.0 25 0 60250.0 + 43336 WLWRGKPVRVT 11 60 699.4088777284184 1396.8032025236366 2 699.4091064333916 MULTI CID FTMS 0 0 0 9093 287303.3125 0.4365195149075184 -2 0.2659988403320312 6 Unmodified _WLWRGKPVRVT_ REV__ENSG00000130702|ENST00000252999|LAMA5 0.4082653385326392 0.873221713011348 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.945 51792.8 1.0 4684 4413 9093 SUDHL4_400M_050219_1,9099 SUDHL4_400M_050219_1,9099,WLWRGKPVRVT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9100 49.402 320.0 250700.0 25 0 22193.0 + 2348 AQLILKAI 8 113 435.2947050524758 868.5748571717517 2 435.2947570681572 MULTI CID FTMS 0 0 0 9093 249683.34375 1.0 0 0.0 7 Unmodified _AQLILKAI_ ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000511494.5_1_5:134670668-134681802:-|nuORF;ENST00000512507.5_1_5:134670668-134688768:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1 44.40701690623563 0.1655546087385432 5 [QA]{I|L}{I|L}{I|L}KA{I|L} 8 0 + 48.677 0.0 0.0 5.6042 5.6042 92.731 0.0 0.0 0.0 21.18166955578001 7.544873321858503 7.544873321858503 48.67654827399261 0 0.9247425010840048 0.8239087409443188 0.0 0.0 + + [QA]{I|L}{I|L}{I|L}KA{I|L} 5.6042 + + 114 + 1 1.945 65013.6 1.0 4685 4413 9093 SUDHL4_400M_050219_1,9100 SUDHL4_400M_050219_1,9100,AQLILKAI False True AQLILKAI 49.40245 435.294757068157 1320953.625 9093.0 ENST00000512507.5_1_5:134670668-134688768:-|nuORF;;ENST00000511494.5_1_5:134670668-134681802:-|nuORF;;nc|ENSG00000113648|O75367-3|MACROH2A1;;ENSG00000113648|ENST00000511689|MACROH2A1;;nc|ENSG00000113648|O75367|MACROH2A1 1.9554860591888428 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9101 49.407 218.0 142170.0 25 0 34675.0 -1 LCALRWRKRR 10 60 707.9219535111006 1413.829354089001 2 707.9219848513603 MULTI CID FTMS 0 0 0 9093 217704.265625 0.5336841286779886 -2 0.2659988403320312 8 Carbamidomethyl (C) _LC(Carbamidomethyl (C))ALRWRKRR_ ENST00000456291.1_3_9:123638279-123638699:-|nuORF 0.4007161486938917 0.7247829448918255 5 K 1 -1 0.71334 0.0 0.0 0.050454 0.0 0.0 1043.6094577040385 239.09324060611564 1282.702698310154 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.050454 + + 14 + 1 1.945 32558.4 1.0 4686 4413 9093 SUDHL4_400M_050219_1,9101 SUDHL4_400M_050219_1,9101,LCALRWRKRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9102 49.411 225.0 275730.0 25 0 32610.0 + 15673 IQPGRGFVLY 10 90 575.323955319973 1148.633357706746 2 575.3242675662041 MULTI CID FTMS 0 0 0 9093 215627.109375 0.270127936036836 2 -0.1974372863769531 9 Unmodified _IQPGRGFVLY_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 20.580933911654288 0.5022139299129796 5 {I|L}Q{I|L}Y 4 6 37.735 0.0 0.0 3.2852 0.0 0.0 613.3329945294937 0.0 613.3329945294937 0.0 27.0217596488785 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 {I|L}Q{I|L}Y 3.2852 - 61 1 1.945 56488.4 1.0 4687 4413 9093 SUDHL4_400M_050219_1,9102 SUDHL4_400M_050219_1,9102,IQPGRGFVLY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9103 49.415 225.0 380950.0 25 0 84742.0 + 17780 KQIFETIYY 9 96 602.816082197772 1203.6176114623438 2 602.8166381716728 MULTI CID FTMS 0 0 0 9093 211681.625 0.4942057978500648 -1 0.1217231750488281 10 Unmodified _KQIFETIYY_ ENSG00000167325|ENST00000300738|RRM1 39.94969957227396 0.0757326808254658 5 [Y{I|L}]VD[KQ]{I|L}YY 9 6 + 55.908 0.0 0.0 4.645 4.645 79.153 0.0 0.0 0.0 2.3147789609185168 16.478174818886373 2.3147789609185168 2.3147789609185168 0 0.5 1.3979400086720375 1.3494850021680094 0.0 [Y{I|L}]VD[KQ]{I|L}YY;[Q{I|L}]K{M(Oxidation (M))|F}ET{I|L}YY;[{M(Oxidation (M))|F}E]T{I|L}[KQ]{I|L}YY;[Y{I|L}]V{[QV]|[N{I|L}]|[RA]|[KV]}[SG]{I|L}YY;[Q{I|L}]KT[{M(Oxidation (M))|F}E]{I|L}YY;[{I|L}T][KQ][{M(Oxidation (M))|F}E]{I|L}YY 4.645;4.4526;3.936;3.4645;3.3292;3.1192 -;-;-;-;-;- 204 1 1.945 65955.2 1.0 4688 4413 9093 SUDHL4_400M_050219_1,9103 SUDHL4_400M_050219_1,9103,KQIFETIYY True True KQIFETIYY 49.415083 602.816638171673 5923498.0 9093.0 ENSG00000167325|ENST00000300738|RRM1 7.3323259353637695 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9104 49.421 333.0 257360.0 25 0 66850.0 10637 FVPKFKVLPY 10 62 619.3716413183721 1236.728729703544 2 619.3722411990166 MULTI CID FTMS 0 0 0 9093 182007.625 0.4223598556813904 -1 0.1217231750488281 11 Unmodified _FVPKFKVLPY_ ENSG00000128908|ENST00000648947|INO80 1.6526216038709556 0.7189921496796233 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.945 69564.5 1.0 4689 4413 9093 SUDHL4_400M_050219_1,9104 SUDHL4_400M_050219_1,9104,FVPKFKVLPY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9105 49.424 149.0 222570.0 25 0 33331.0 + 16163 IVASMWDSL 9 70 511.2562438935213 1020.4979348538428 2 511.7599975466728 MULTI CID FTMS 0 0 0 9093 170120.3125 1.0 0 0.0 12 Unmodified _IVASMWDSL_ ENSG00000092203|ENST00000448790|TOX4;ENSG00000103460|ENST00000219746|TOX3;ENSG00000124191|ENST00000341197|TOX2;nc|ENSG00000092203|O94842-2|TOX4;nc|ENSG00000092203|O94842-3|TOX4;nc|ENSG00000103460|O15405-2|TOX3;nc|ENSG00000124191|Q96NM4-2|TOX2;nc|ENSG00000124191|Q96NM4-3|TOX2;nc|ENSG00000124191|Q96NM4|TOX2 18.13498045792455 0.3457906370836843 5 S{I|L} 2 7 16.13 0.0 0.0 1.5806 0.0 0.0 802.3704914718099 0.0 802.3704914718099 0.0 2.150428173753525 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 + S{I|L} 1.5806 + + 69 + 1 1.945 33274.7 1.0 4690 4413 9093 SUDHL4_400M_050219_1,9105 SUDHL4_400M_050219_1,9105,IVASMWDSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9106 49.432 435.0 168420.0 25 0 20501.0 11698 GLGFVLGLG 9 111 416.7495412874718 831.4845296417436 2 416.7502014040947 MULTI CID FTMS 0 0 0 9093 142047.296875 1.0 0 0.0 13 Unmodified _GLGFVLGLG_ ENST00000301873.9_2_11:65325392-65325698:-|nuORF 36.46614268402704 0.0948557732959553 5 {[VA]|[{I|L}G]}GPT{M(Oxidation (M))|F}K{I|L} 8 5 + 66.463 0.0 0.0 7.9933 7.9933 97.36 0.0 0.0 0.0 27.009140221040937 10.679140395192128 10.679140395192128 25.09298369096159 0 0.7742275032520141 2.0 0.3807196863200844 0.0 {[VA]|[{I|L}G]}GPT{M(Oxidation (M))|F}K{I|L};{[VA]|[{I|L}G]}G{M(Oxidation (M))|F}VG{I|L}G{I|L};{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]GG{I|L}G{I|L};{[VA]|[{I|L}G]}G{M(Oxidation (M))|F}[R{I|L}]G{I|L};{[VA]|[{I|L}G]}[R{M(Oxidation (M))|F}]G{I|L}G{I|L};{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]N{I|L}G{I|L};[TP]G{M(Oxidation (M))|F}K{I|L}G{I|L};{[VA]|[{I|L}G]}[MT]K{I|L}G{I|L};[PG]T{M(Oxidation (M))|F}K{I|L}G{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VG{I|L}G{I|L} 7.9933;4.9755;3.779;3.506;3.3619;3.3619;3.1085;2.9967;2.1726;1.5517 -;-;-;-;-;-;-;-;-;- 219 + 1 1.945 58671.8 1.0 4691 4413 9093 SUDHL4_400M_050219_1,9106 SUDHL4_400M_050219_1,9106,GLGFVLGLG True False GLGPTFKL 49.431844 416.750201404095 914952.75 9093.0 nc|ENSG00000174483|Q8NFJ9-2|BBS1;;nc|ENSG00000174483|Q8NFJ9-3|BBS1;;ENSG00000174483|ENST00000318312|BBS1;;ENST00000529955.5_1_11:66281964-66299243:+|nuORF 4.241905291875203 2.0 False 8.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9107 49.437 288.0 338550.0 25 0 45084.0 + 12692 GVLPNIQAV 9 122 455.7714586385336 909.5283643438672 2 455.7715331912041 MULTI CID FTMS 0 0 0 9093 133573.390625 0.0875016069995578 -2 0.2659988403320312 14 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 44.40701690623563 0.0526327925666318 5 [NP]{I|L}QA{I|L} 6 4 43.862 0.0 0.0 4.8225 0.0 0.0 0.0 270.14491642810464 270.14491642810464 16.677353201839438 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.6861818737241735 [NP]{I|L}QA{I|L} 4.8225 - 1102 1 1.945 79193.0 1.0 4692 4413 9093 SUDHL4_400M_050219_1,9107 SUDHL4_400M_050219_1,9107,GVLPNIQAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9108 49.447 485.0 121950.0 25 0 12383.0 43456 WTKRPRPKRE 10 92 451.9324372672723 1352.775482402017 3 452.2667419314384 MULTI CID FTMS 0 0 0 9093 122609.9453125 0.5081653509387707 3 -0.3013725280761719 15 Unmodified _WTKRPRPKRE_ ENST00000466003.1_1_1:145610669-145610729:-|nuORF 1.6526216038709556 0.7189921496796233 5 V 1 10 9.5329 0.0 0.0 0.70469 0.0 0.0 1235.695890582484 0.0 1235.695890582484 0.0 6.433947782746854 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.70469 - 7 + 1 1.945 57754.4 1.0 4693 4413 9093 SUDHL4_400M_050219_1,9108 SUDHL4_400M_050219_1,9108,WTKRPRPKRE False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9109 49.461 800.0 209560.0 25 0 23821.0 22717 LQGPLPRKTRD 11 130 640.8746129315134 1279.7346729298267 2 640.8754760622978 MULTI CID FTMS 0 0 0 9093 105227.6796875 0.7222502072512743 -1 0.1217231750488281 16 Unmodified _LQGPLPRKTRD_ SVA_D_dup1073|chr14:65632982-65634580:+|1.2354694919100482|0.4697700201192361|1.4|47.0|43|3|sense 4.897010918128616 0.8520435188433833 5 {I|L} 1 10 8.7724 0.0 0.0 0.68549 0.0 0.0 1148.6396239569735 0.0 1148.6396239569735 0.0 6.782736617569061 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.68549 + + 101 + 1 1.945 126910.2 0.5899999737739563 4694 4413 9093 SUDHL4_400M_050219_1,9109 SUDHL4_400M_050219_1,9109,LQGPLPRKTRD False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 9110 49.475 800.0 86228.0 25 0 17290.0 14338 IERHLAYLKWI 11 96 721.4216943996696 1440.8288358661391 2 721.4221679568291 MULTI CID FTMS 0 0 0 9093 104057.1875 0.4102107278784881 2 -0.1974372863769531 17 Unmodified _IERHLAYLKWI_ ENSG00000135249|ENST00000257700|RINT1 1.3295316138638542 0.8688751186870782 5 {[QV]|[N{I|L}]|[RA]|[KV]}PQR{I|L} 6 8 18.443 0.0 0.0 1.2801 0.0 0.0 0.0 716.3851462511578 716.3851462511578 8.262333472628825 0.0 0.0 0.0 0 0.0 0.619788758288394 0.0 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}PQR{I|L} 1.2801 - 145 1 1.945 64432.4 0.5799999833106995 4695 4413 9093 SUDHL4_400M_050219_1,9110 SUDHL4_400M_050219_1,9110,IERHLAYLKWI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9111 49.48 232.0 308910.0 25 0 29754.0 + 1464 ALFEGKVQL 9 118 502.7922512631642 1003.5699495931284 2 502.7669555544853 MULTI CID FTMS 0 0 0 9093 83164.8203125 0.0277730609951703 4 -0.3628730773925781 18 Unmodified _ALFEGKVQL_ ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF;nc|ENSG00000157796|Q8NEZ3-2|WDR19 20.453626601364224 0.2830276176381075 5 [{I|L}A]{M(Oxidation (M))|F}E 4 5 32.664 0.0 0.0 3.2548 0.0 0.0 0.0 540.3134859674436 540.3134859674436 8.733265875949456 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 0.0 0.0 + [{I|L}A]{M(Oxidation (M))|F}E 3.2548 + + 421 + 1 1.945 58065.8 1.0 4696 4413 9093 SUDHL4_400M_050219_1,9111 SUDHL4_400M_050219_1,9111,ALFEGKVQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9113 49.496 800.0 149150.0 25 0 33994.0 + 41966 VQLKLFKSVL 10 116 587.8798921826581 1173.745231432116 2 587.8798705935478 MULTI CID FTMS 0 0 0 9112 94479.234375 0.3083738222431884 3 -0.2631111145019531 1 Unmodified _VQLKLFKSVL_ REV__ENST00000269485.11_1_18:60053308-60053521:+|nuORF 3.944395688203298 0.708391353636983 5 WQQAE 5 -1 27.691 0.0 0.0 2.3592 0.0 0.0 80.29964644801392 448.1565340631469 528.4561805111608 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 WQQAE 2.3592 - 181 + 1 1.945 93087.6 0.7099999785423279 4697 4414 9112 SUDHL4_400M_050219_1,9113 SUDHL4_400M_050219_1,9113,VQLKLFKSVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9114 49.498 11.0 5129700.0 25 0 269210.0 + 29394 QLDDLKVEL 9 100 536.7973325733155 1071.580112213431 2 536.7977172732353 MULTI CID FTMS 0 0 0 9112 5262730.5 0.8372972417415083 -1 0.099761962890625 2 Unmodified _QLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 34.40172386719151 0.1061884637610825 5 [Q{I|L}]{M(Oxidation (M))|F}{I|L}VKD 7 5 26.692 0.0 0.0 2.4909 0.0 0.0 0.0 225.0886171930297 225.0886171930297 11.452745603393732 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 0.2742275032520141 0.0 [Q{I|L}]{M(Oxidation (M))|F}{I|L}VKD 2.4909 - 449 + 1 1.945 48994.9 1.0 4698 4414 9112 SUDHL4_400M_050219_1,9114 SUDHL4_400M_050219_1,9114,QLDDLKVEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9115 49.5 143.0 760260.0 25 0 140270.0 + 34071 SLLESVQKL 9 103 508.803178996838 1015.591805060476 2 508.8034545779228 MULTI CID FTMS 0 0 0 9112 492210.90625 0.5530106222144512 -1 0.099761962890625 3 Unmodified _SLLESVQKL_ ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR 60.07390631473393 0.0260411565414776 5 {[TV]|[{I|L}S]}{I|L}ESVQK{I|L} 9 0 + 87.824 0.0 0.0 8.6476 8.6476 94.817 0.0 0.0 0.0 38.10953779009165 12.98332479720628 12.98332479720628 9.208187539523747 0 1.174742501084005 2.0 0.4247425010840047 0.7215141619232908 + + {[TV]|[{I|L}S]}{I|L}ESVQK{I|L};{[TV]|[{I|L}S]}{I|L}ESV[AG]K{I|L};{[TV]|[{I|L}S]}{I|L}ESV[{I|L}A][KG];[Q{I|L}]KC(Carbamidomethyl (C))VQK{I|L};[Q{I|L}]KC(Carbamidomethyl (C))V[AG]K{I|L} 8.6476;7.7409;5.6863;2.7159;1.8039 +;-;-;-;- + 926 + 1 1.945 84621.0 1.0 4699 4414 9112 SUDHL4_400M_050219_1,9115 SUDHL4_400M_050219_1,9115,SLLESVQKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9116 49.505 221.0 461120.0 25 0 55495.0 + 40782 VLLGKVYVV 9 102 495.32314429523393 988.631735657268 2 495.3237182497978 MULTI CID FTMS 0 0 0 9112 320257.125 0.7096877844868528 -1 0.099761962890625 4 Unmodified _VLLGKVYVV_ ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24 28.486842064014134 0.1687311288560894 5 [{I|L}V][KG]YV{I|L}VV 9 3 + 51.118 0.0 0.0 5.1706 5.1706 84.328 0.0 0.0 0.0 6.987249507692184 29.3918801029556 6.987249507692184 6.020599913279625 0 1.0994850021680094 2.0 0.0 0.0 [{I|L}V][KG]YV{I|L}VV;[{I|L}V][KG]Y{I|L}VVV;[{I|L}V]Y[KG]V{I|L}VV;[YV]VKAV{I|L}VV;[{I|L}V]Y[KG]{I|L}VVV;[KG]{I|L}VYV{I|L}VV;[YV]VKG{I|L}{I|L}VV;[{I|L}V]{I|L}[YK]GVVV;[YV]VGK{I|L}{I|L}VV;[YV]VKA{I|L}VVV 5.1706;4.5616;4.4636;4.0221;3.8546;3.8315;3.7176;3.6694;3.5395;3.4131 -;-;-;-;-;-;-;-;-;- 569 1 1.945 80866.1 1.0 4700 4414 9112 SUDHL4_400M_050219_1,9116 SUDHL4_400M_050219_1,9116,VLLGKVYVV False True VLLGKVYVV 49.50465 495.323718249798 2506865.75 9112.0 nc|ENSG00000114796|Q6TFL4-2|KLHL24;;ENSG00000114796|ENST00000242810|KLHL24 3.1672585010528564 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9117 49.508 184.0 413160.0 25 0 40750.0 + 17373 KMDEVLYSI 9 103 549.2799423566495 1096.5453317800989 2 549.2807494997978 MULTI CID FTMS 0 0 0 9112 270490.09375 0.7134093561920611 -1 0.099761962890625 5 Unmodified _KMDEVLYSI_ ENSG00000141759|ENST00000269601|TXNL4A 47.594388314883695 0.0456443387682827 5 {NN|[MP]|[D{I|L}]|[EV]}DMK{I|L}YS{I|L} 9 3 + 76.331 0.0 0.0 6.9611 6.9611 94.236 0.0 0.0 0.0 13.075931882253355 16.478174818886366 13.075931882253355 13.075931882253355 0 1.2059771852360797 1.3979400086720375 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}DMK{I|L}YS{I|L};{[TV]|[{I|L}S]}{[CA]|SS}EV{I|L}YS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VMK{I|L}YS{I|L};{[{M(Oxidation (M))|F}C]|[YS]}[HS]K{I|L}YS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MVK{I|L}YS{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MKV{I|L}YS{I|L};[Y{I|L}]YY{I|L}YS{I|L};[HA]{[YC]|[HE]}K{I|L}YS{I|L};{[QN]|[E{I|L}]|[KN]}[EC]K{I|L}YS{I|L};{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V{I|L}YS{I|L} 6.9611;5.7686;5.58;5.1676;5.1449;4.8744;4.5583;4.4431;4.2508;3.9803 -;-;-;-;-;-;-;-;-;- 403 1 1.945 60949.4 1.0 4701 4414 9112 SUDHL4_400M_050219_1,9117 SUDHL4_400M_050219_1,9117,KMDEVLYSI True True KMDEVLYSI 49.508206 549.280749499798 2561132.75 9112.0 ENSG00000141759|ENST00000269601|TXNL4A 5.297077496846517 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9118 49.512 175.0 437130.0 25 0 58409.0 + + 9297 FLDGHDLQL 9 96 529.2693698905011 1056.5241868478022 2 529.2699462771416 MULTI CID FTMS 0 0 0 9112 258089.0 0.7886608742618045 -1 0.099761962890625 6 Unmodified _FIEIFNQF_ ENSG00000196588|ENST00000355630|MRTFA;nc|ENSG00000196588|Q969V6|MRTFA 44.40701690623563 0.1655546087385432 5 D{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L} 6 -1 48.053 0.0 0.0 4.5482 0.0 0.0 309.10786635566564 0.0 309.10786635566564 0.0 14.392653074926043 0.0 0.0 0 0.3807196863200844 0.0 0.7614393726401688 0.0 D{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L} 4.5482 - 458 1 1.945 62397.7 1.0 4702 4414 9112 SUDHL4_400M_050219_1,9118 SUDHL4_400M_050219_1,9118,FIEIFNQF False False FLDGHDLQL 49.511612 529.269946277142 2003336.5 9112.0 ENSG00000196588|ENST00000355630|MRTFA;;nc|ENSG00000196588|Q969V6|MRTFA 2.266630053520202 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9119 49.525 800.0 153670.0 25 0 31560.0 + 7767 ELFRKVRKMKP 11 131 716.4352514760735 1430.855950018947 2 716.4357787966728 MULTI CID FTMS 0 0 0 9112 243620.296875 1.0 0 0.0 7 Unmodified _ELFRKVRKMKP_ REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF 2.735195868890462 0.8622431031272658 5 {I|L} 1 -1 10.379 0.0 0.0 0.72534 0.0 0.0 1299.76096208125 0.0 1299.76096208125 0.0 1.5663222604049682 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.72534 + + 151 + 1 1.945 99846.7 0.8399999737739563 4703 4414 9112 SUDHL4_400M_050219_1,9119 SUDHL4_400M_050219_1,9119,ELFRKVRKMKP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9120 49.53 251.0 322590.0 25 0 32797.0 + + -1 KLMSELESF 9 114 542.776680895705 1083.53880885821 2 542.2734863162041 MULTI CID FTMS 0 0 0 9112 220416.9375 0.90083492735367 -6 0.801727294921875 8 Carbamidomethyl (C) _LALFLC(Carbamidomethyl (C))NSF_ nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1-4|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;ENST00000435616.5_1_2:174224078-174228757:+|nuORF;ENST00000496441.5_1_2:174219691-174228743:+|nuORF;nc|ENSG00000144354|Q9BWT1|CDCA7;nc|ENSG00000144354|Q9BWT1-5|CDCA7;ENSG00000144354|ENST00000306721|CDCA7 19.438996006549623 0.310492472477042 5 SE{I|L}K[HA]S{M(Oxidation (M))|F} 8 -1 53.88 0.0 0.0 4.9726 0.0 0.0 166.08533093027864 0.0 166.08533093027864 0.0 31.484236336163377 0.0 0.0 0 0.25 0.0 1.3243923658886183 0.0 SE{I|L}K[HA]S{M(Oxidation (M))|F} 4.9726 - 819 + 1 1.945 66149.3 1.0 4704 4414 9112 SUDHL4_400M_050219_1,9120 SUDHL4_400M_050219_1,9120,LALFLCNSF False False KLMSELESF 49.530129 542.273486316204 1716816.625 9112.0 nc|ENSG00000144354|Q9BWT1-3|CDCA7;;nc|ENSG00000144354|Q9BWT1-4|CDCA7;;nc|ENSG00000144354|Q9BWT1-6|CDCA7;;ENST00000435616.5_1_2:174224078-174228757:+|nuORF;;ENST00000496441.5_1_2:174219691-174228743:+|nuORF;;nc|ENSG00000144354|Q9BWT1|CDCA7;;nc|ENSG00000144354|Q9BWT1-5|CDCA7;;ENSG00000144354|ENST00000306721|CDCA7 5.570153713226318 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9121 49.534 197.0 229910.0 25 0 39160.0 + -1 VKEHIKEVKVF 11 82 466.6081775910808 1396.8027033734425 3 466.6079894900322 MULTI CID FTMS 0 0 0 9112 204056.65625 0.6009199952882106 -2 0.2214851379394531 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VKEHIKEVKVF_ REV__ENSG00000136026|ENST00000378026|CKAP4 1.3295316138638542 0.8688751186870782 5 {M(Oxidation (M))|F} 1 -1 13.979 0.0 0.0 1.0008 0.0 0.0 1231.7232488830111 0.0 1231.7232488830111 0.0 3.26606256887672 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0008 + + 25 + 1 1.945 46381.6 1.0 4705 4414 9112 SUDHL4_400M_050219_1,9121 SUDHL4_400M_050219_1,9121,VKEHIKEVKVF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9122 49.538 222.0 417520.0 25 0 30802.0 42507 VTLATLKMSV 10 114 531.8160891729204 1061.6176254126408 2 531.8171264529228 MULTI CID FTMS 0 0 0 9112 187786.734375 1.0 0 0.0 10 Unmodified _VTLATLKMSV_ ENSG00000181163|ENST00000296930|NPM1;ENST00000412580.1_1_2:122466160-122466664:-|nuORF;ENST00000438918.1_1_2:204637659-204638058:-|nuORF;ENST00000502784.2_1_5:93019019-93019256:-|nuORF;ENST00000513394.1_1_8:57014234-57014760:-|nuORF;ENST00000518587.1_1_5:170814889-170819841:+|nuORF;ENST00000521260.1_1_5:170818338-170818467:+|nuORF;nc|ENSG00000181163|P06748-2|NPM1;nc|ENSG00000181163|P06748-3|NPM1 3.5964929083625545 0.7100006075494749 5 {I|L}DD{I|L} 4 8 18.928 0.0 0.0 1.7829 0.0 0.0 218.1718559868549 384.2000521295532 602.3719081164081 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DD{I|L} 1.7829 - 60 + 1 1.945 73354.3 1.0 4706 4414 9112 SUDHL4_400M_050219_1,9122 SUDHL4_400M_050219_1,9122,VTLATLKMSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9123 49.545 318.0 267340.0 25 0 33085.0 + 20671 LLQWKMRA 8 110 523.3032625274192 1044.5919721216385 2 523.3040649294853 MULTI CID FTMS 0 0 0 9112 182507.6875 0.7433777726807065 -1 0.099761962890625 11 Unmodified _LLQWKMRA_ REV__ENSG00000139116|ENST00000361418|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-2|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-3|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-4|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-5|KIF21A;REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A 2.577480529830294 0.808687252328423 5 {M(Oxidation (M))|F} 1 -1 11.42 0.0 0.0 1.0932 0.0 0.0 879.5128685833555 0.0 879.5128685833555 0.0 0.310739533744222 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0932 + + 9 + 1 1.945 66804.6 1.0 4707 4414 9112 SUDHL4_400M_050219_1,9123 SUDHL4_400M_050219_1,9123,LLQWKMRA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9124 49.548 152.0 322570.0 25 0 27205.0 + 13465 HLSNILSEV 9 79 506.2770503516776 1010.5395477701552 2 506.2771484255791 MULTI CID FTMS 0 0 0 9112 159962.3125 1.0 0 0.0 12 Unmodified _HLSNILSEV_ ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 27.628801355627647 0.1796483985696185 5 [H{I|L}][NS]{I|L}{I|L}SEV 9 0 + 39.574 0.0 0.0 3.9161 3.9161 76.179 0.0 0.0 0.0 1.7339374311232802 4.659452731211722 1.7339374311232802 1.7339374311232802 0 0.6435078169319297 1.0969100130080565 0.3807196863200844 0.0 + + [H{I|L}][NS]{I|L}{I|L}SEV;{[TV]|[{I|L}S]}NH{I|L}{I|L}SEV;{[TV]|[{I|L}S]}GGH{I|L}{I|L}SEV;[H{I|L}][RV]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EV 3.9161;3.7445;2.8333;0.38198 +;-;-;- + 90 1 1.945 45250.3 1.0 4708 4414 9112 SUDHL4_400M_050219_1,9124 SUDHL4_400M_050219_1,9124,HLSNILSEV False True HLSNILSEV 49.548064 506.277148425579 1217470.375 9112.0 ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 5.450629552205403 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9125 49.554 340.0 357830.0 25 0 51493.0 + 9679 FLRDTADFQI 10 115 613.3142143597282 1224.6138757862564 2 613.3141357302666 MULTI CID FTMS 0 0 0 9112 91951.0546875 0.2844821660229861 -1 0.099761962890625 13 Unmodified _FLRDTADFQI_ ENST00000530727.5_1_1:198608260-198608399:+|nuORF 47.7319792270244 0.0934623409360514 5 {I|L}{I|L}C[DN]{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q{I|L} 10 5 + 56.89 0.0 0.0 4.6456 4.6456 82.313 0.0 0.0 0.0 5.299632233774432 16.53212513775344 5.299632233774432 5.299632233774432 0 0.5994850021680094 1.0969100130080565 0.7742275032520141 0.0 {I|L}{I|L}C[DN]{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[WK]D{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}AATAD{M(Oxidation (M))|F}Q{I|L};{I|L}{I|L}C[DN]{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}AATW{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[WK]D{M(Oxidation (M))|F}[AG]{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KQ]TAD{M(Oxidation (M))|F}Q{I|L};{I|L}{I|L}C[R{M(Oxidation (M))|F}]W{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}AATAD{M(Oxidation (M))|F}[AG]{I|L};{[{M(Oxidation (M))|F}D]|MM}[R{I|L}]TAD{M(Oxidation (M))|F}Q{I|L} 4.6456;4.2128;4.0541;3.8972;3.5171;3.4609;3.4567;3.3779;3.3087;3.1562 -;-;-;-;-;-;-;-;-;- 616 1 1.945 93864.2 1.0 4709 4414 9112 SUDHL4_400M_050219_1,9125 SUDHL4_400M_050219_1,9125,FLRDTADFQI True True FLRDTADFQI 49.554233 613.3159 2126201.5 9112.0 ENST00000530727.5_1_1:198608260-198608399:+|nuORF 6.249693234761556 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9126 49.56 288.0 99184.0 25 0 18621.0 -1 LLFRCPRLLNL 11 56 472.284745929814 1413.832408389642 3 472.2844421267509 MULTI CID FTMS 0 0 0 9112 94193.5234375 0.4765941838672591 -1 0.099761962890625 14 Carbamidomethyl (C) _LLFRC(Carbamidomethyl (C))PRLLNL_ ENSG00000080511|ENST00000591589|RDH8 0.5059551277355931 0.8727608062196215 5 {I|L} 1 -1 11.42 0.0 0.0 0.80773 0.0 0.0 1282.7372373464764 0.0 1282.7372373464764 0.0 10.706645763982346 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80773 + + 4 + 1 1.945 34329.0 1.0 4710 4414 9112 SUDHL4_400M_050219_1,9126 SUDHL4_400M_050219_1,9126,LLFRCPRLLNL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9127 49.564 236.0 788270.0 25 0 77660.0 + 12694 GVLPNIQAV 9 99 910.536216523006 909.528940056406 1 912.5444213747978 MULTI CID FTMS 0 0 0 9112 328412.40625 0.3229485805064159 -3 0.3657608032226562 15 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 26.88365393820708 0.1891292719743517 5 [NP]{I|L}QATVA 8 5 40.75 0.0 0.0 4.4804 0.0 0.0 0.0 112.05041479309683 112.05041479309683 24.820618910682484 0.0 0.0 0.0 0 0.0 1.0 0.6505149978319906 0.7614393726401688 [NP]{I|L}QATVA 4.4804 - 1207 1 1.945 120449.5 1.0 4711 4414 9112 SUDHL4_400M_050219_1,9127 SUDHL4_400M_050219_1,9127,GVLPNIQAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9128 49.578 800.0 149450.0 25 0 17361.0 + 39724 VEKFRTSKIYL 11 121 692.4007240616609 1382.7868951901216 2 692.4007446169853 MULTI CID FTMS 0 0 0 9112 206430.1875 0.9927279276836858 -1 0.099761962890625 16 Unmodified _VEKFRTSKIYL_ REV__ENST00000480008.1_1_6:170108442-170108562:-|nuORF 3.2813086475875832 0.8596665074481906 5 R 1 -1 11.783 0.0 0.0 0.8521 0.0 0.0 1208.6747411147294 0.0 1208.6747411147294 0.0 0.9807552649232498 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.8521 + + 130 + 1 1.945 92389.9 0.7900000214576721 4712 4414 9112 SUDHL4_400M_050219_1,9128 SUDHL4_400M_050219_1,9128,VEKFRTSKIYL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9130 49.586 288.0 175540.0 25 0 47480.0 28685 PVQLMRFPRPL 11 72 677.3953084722584 1352.7760640113167 2 677.3950073122978 MULTI CID FTMS 0 0 0 9129 218730.578125 0.2185283710916243 6 -0.4956092834472656 1 Unmodified _PVQLMRFPRPL_ nc|ENSG00000163138|Q8N7B6-4|PACRGL 1.3295316138638542 0.8688751186870782 5 {I|L} 1 10 10.278 0.0 0.0 0.75974 0.0 0.0 1221.6810608148307 0.0 1221.6810608148307 0.0 6.29818655252878 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.75974 + + 5 + 1 1.945 51098.8 1.0 4713 4415 9129 SUDHL4_400M_050219_1,9130 SUDHL4_400M_050219_1,9130,PVQLMRFPRPL False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 9131 49.593 381.0 117810.0 25 0 16643.0 16638 KEILQNYFLK 10 81 648.3741757855594 1294.7337986379189 2 648.3744994997978 MULTI CID FTMS 0 0 0 9129 199753.140625 0.6945314224892519 1 -0.1039352416992187 2 Unmodified _KEILQNYFLK_ ENSG00000155754|ENST00000439140|C2CD6 2.9952420565917617 0.7127817445270067 5 {I|L} 1 9 11.109 0.0 0.0 0.85803 0.0 0.0 1163.638719147487 0.0 1163.638719147487 0.0 7.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.85803 + + 4 + 1 1.945 41527.9 1.0 4714 4415 9129 SUDHL4_400M_050219_1,9131 SUDHL4_400M_050219_1,9131,KEILQNYFLK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9132 49.596 141.0 369570.0 25 0 31497.0 + 25137 MQIFVKTL 8 94 490.28644231131136 978.5583316894227 2 490.2858764529228 MULTI CID FTMS 0 0 0 9129 282008.8125 1.0 0 0.0 3 Unmodified _MQIFVKTL_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000463185.1_1_2:55459960-55460026:+|nuORF;ENST00000471772.6_1_2:55459960-55460558:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000598814.1_1_19:18682694-18684218:+|nuORF 34.40172386719151 0.3279500639400574 5 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{M(Oxidation (M))|F}VKT{I|L} 8 0 + 41.166 0.0 0.0 4.2068 4.2068 86.642 0.0 0.0 0.0 29.906733937944445 17.510958772176572 17.510958772176572 14.262137858390812 0 0.8494850021680094 0.0 1.046771660839286 0.0 + + {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{M(Oxidation (M))|F}VKT{I|L};VV{[CA]|SS}{M(Oxidation (M))|F}VKT{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[Y{I|L}][KA]{I|L} 4.2068;2.7493;0.37699 +;-;- + 109 + 1 1.945 46222.2 1.0 4715 4415 9129 SUDHL4_400M_050219_1,9132 SUDHL4_400M_050219_1,9132,MQIFVKTL False True MQIFVKTL 49.596097 490.285876452923 1651901.875 9129.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000598814.1_1_19:18682694-18684218:+|nuORF;;ENST00000463185.1_1_2:55459960-55460026:+|nuORF;;ENST00000471772.6_1_2:55459960-55460558:+|nuORF;;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC 5.402372678120931 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9133 49.6 200.0 258070.0 25 0 24407.0 + 16701 KESEVFYEL 9 74 572.2817470025893 1142.5489410719786 2 572.2822143435478 MULTI CID FTMS 0 0 0 9129 236086.859375 1.0 0 0.0 4 Unmodified _KESEVFYEL_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 21.53697664764585 0.2571576504437394 5 E{I|L} 2 7 21.682 0.0 0.0 1.8977 0.0 0.0 882.4120524995161 0.0 882.4120524995161 0.0 6.1307441774865765 0.0 0.0 0 0.5 0.0 0.5 0.0 + E{I|L} 1.8977 + + 89 + 1 1.945 47634.4 1.0 4716 4415 9129 SUDHL4_400M_050219_1,9133 SUDHL4_400M_050219_1,9133,KESEVFYEL False True KESEVFYEL 49.59993 572.282214343548 1665368.25 9129.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 2.162573993206024 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9134 49.603 128.0 311360.0 25 0 17893.0 + 33563 RIMEFTTTL 9 85 556.2956364463537 1110.5767199595073 2 556.2976562380791 MULTI CID FTMS 0 0 0 9129 229290.4375 0.8712998995735587 1 -0.1039352416992187 5 Unmodified _SILSFETTTL_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 43.85829265575387 0.1168243637355526 5 {[TV]|[{I|L}S]}P[MT]{M(Oxidation (M))|F}TTT{I|L} 10 4 + 70.903 0.0 0.0 6.3843 6.3843 63.085 0.0 0.0 0.0 10.334237554869503 16.53212513775344 10.334237554869503 0.0 0 0.5 2.0 0.9247425010840048 0.0 {[TV]|[{I|L}S]}P[MT]{M(Oxidation (M))|F}TTT{I|L};{[TV]|[{I|L}S]}{[ET]|[MV]}V{M(Oxidation (M))|F}TTT{I|L};{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}{M(Oxidation (M))|F}TTT{I|L};[PS][{M(Oxidation (M))|F}V]V{M(Oxidation (M))|F}TTT{I|L};[PS]{I|L}[MT]{M(Oxidation (M))|F}TTT{I|L};[{I|L}T]{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}TTT{I|L};[VP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{M(Oxidation (M))|F}TTT{I|L};[VP]T[MT]{M(Oxidation (M))|F}TTT{I|L};{[TV]|[{I|L}S]}{[ET]|[MV]}V[WY]T{I|L};{[TV]|[{I|L}S]}{[ET]|[MV]}[YR]ET{I|L} 6.3843;6.3843;5.4538;4.9905;4.9905;4.7721;4.4519;4.4519;3.9964;3.5668 -;-;-;-;-;-;-;-;-;- 411 1 1.945 39793.7 1.0 4717 4415 9129 SUDHL4_400M_050219_1,9134 SUDHL4_400M_050219_1,9134,SILSFETTTL True False RIMEFTTTL 49.602557 556.297656238079 1923770.25 9129.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 5.968870957692464 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9135 49.616 800.0 111610.0 25 0 10783.0 + 23907 LVNAVIEWQLK 11 114 656.8877549772877 1311.7609570213754 2 656.8886596560478 MULTI CID FTMS 0 0 0 9129 207611.0 0.8139926489448779 2 -0.165435791015625 6 Unmodified _LVNAVIEWQLK_ REV__ENSG00000115760|ENST00000421745|BIRC6 5.731851221503515 0.8481046878870278 5 {I|L} 1 -1 10.837 0.0 0.0 0.82618 0.0 0.0 1180.6657402018425 0.0 1180.6657402018425 0.0 1.2333616667069425 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.82618 + + 60 + 1 1.945 72601.7 0.8700000047683716 4718 4415 9129 SUDHL4_400M_050219_1,9135 SUDHL4_400M_050219_1,9135,LVNAVIEWQLK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9136 49.624 415.0 219450.0 25 0 26184.0 -1 QLMKKVMEKL 10 100 632.362053162152 1262.709553391104 2 632.3618041872978 MULTI CID FTMS 0 0 0 9129 185051.71875 0.6477125511298332 2 -0.165435791015625 7 Oxidation (M) _QLMKKVM(Oxidation (M))EKL_ ENSG00000146414|ENST00000275233|SHPRH;nc|ENSG00000146414|Q149N8-2|SHPRH;nc|ENSG00000146414|Q149N8-4|SHPRH;nc|ENSG00000146414|Q149N8-5|SHPRH 3.2813086475875832 0.7114585191678878 5 D 1 -1 6.7474 0.0 0.0 0.53436 0.0 0.0 685.3514123772353 459.2944490706827 1144.645861447918 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 D 0.53436 - 8 + 1 1.945 74819.4 1.0 4719 4415 9129 SUDHL4_400M_050219_1,9136 SUDHL4_400M_050219_1,9136,QLMKKVMEKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9137 49.627 187.0 339000.0 25 0 24926.0 + 34476 SMLDDLRNV 9 99 531.7662685385977 1061.5179841439954 2 531.7669555544853 MULTI CID FTMS 0 0 0 9129 168059.046875 0.93340622428817 1 -0.1039352416992187 8 Unmodified _SMLDDLRNV_ ENSG00000160255|ENST00000652462|ITGB2;ENST00000498666.5_1_21:46314678-46340855:-|nuORF;ENST00000521987.1_1_21:46321596-46323430:-|nuORF 16.149105407346934 0.3995459350917656 5 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DD{I|L} 6 3 46.643 0.0 0.0 4.394 0.0 0.0 0.0 384.1994417779906 384.1994417779906 37.110308602419096 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + {[MS]|[{M(Oxidation (M))|F}A]}{I|L}DD{I|L} 4.394 + + 49 + 1 1.945 54257.3 1.0 4720 4415 9129 SUDHL4_400M_050219_1,9137 SUDHL4_400M_050219_1,9137,SMLDDLRNV False True SMLDDLRNV 49.627426 531.766955554485 2276421.0 9129.0 ENST00000521987.1_1_21:46321596-46323430:-|nuORF;;ENST00000498666.5_1_21:46314678-46340855:-|nuORF;;ENSG00000160255|ENST00000652462|ITGB2 7.055363496144612 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9138 49.633 292.0 196680.0 25 0 11393.0 + 11900 GLWEEAYRV 9 102 561.7845668518446 1121.554580770489 2 561.7833129763603 MULTI CID FTMS 0 0 0 9129 143952.953125 0.2609917221360904 2 -0.165435791015625 9 Unmodified _GLWEEAYRV_ ENSG00000138002|ENST00000260570|IFT172;nc|ENSG00000138002|Q9UG01-2|IFT172 18.1463463914782 0.3454829746528889 5 {[VA]|[{I|L}G]}WEE[RH]PV 9 3 + 46.357 0.0 0.0 4.1333 4.1333 84.38 0.0 0.0 0.0 30.159376459402395 2.8608964587104424 2.8608964587104424 9.208187539523747 0 0.2134679910804404 1.5228787452803376 0.6747425010840047 0.0 {[VA]|[{I|L}G]}WEE[RH]PV;{[VA]|[{I|L}G]}{[DA]|[EG]}EE[RH]PV;{[VA]|[{I|L}G]}WEVYN{[QN]|[E{I|L}]|[KN]};{[VA]|[{I|L}G]}W{M(Oxidation (M))|F}{I|L}S[WD]V;{[VA]|[{I|L}G]}W{M(Oxidation (M))|F}G[C(Carbamidomethyl (C))R]KV;{[VA]|[{I|L}G]}W{M(Oxidation (M))|F}{I|L}S[PA]TM;{[VA]|[{I|L}G]}{[DA]|[EG]}EVYN{[QN]|[E{I|L}]|[KN]};{[VA]|[{I|L}G]}W{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))M]PV;{[VA]|[{I|L}G]}W{M(Oxidation (M))|F}G[WM]{I|L}{I|L};{[VA]|[{I|L}G]}{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}S[WD]V 4.1333;3.3123;3.112;2.5695;2.3261;2.3183;2.291;2.1033;2.0591;1.7485 -;-;-;-;-;-;-;-;-;- 398 + 1 1.945 47178.0 1.0 4721 4415 9129 SUDHL4_400M_050219_1,9138 SUDHL4_400M_050219_1,9138,GLWEEAYRV False True GLWEEAYRV 49.632793 561.78331297636 4970475.0 9129.0 nc|ENSG00000138002|Q9UG01-2|IFT172;;ENSG00000138002|ENST00000260570|IFT172 1.1585601636519034 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9139 49.639 243.0 240110.0 25 0 26628.0 + 1793 ALSGLAVRL 9 102 450.2865256368514 898.5584983405029 2 450.2863952517509 MULTI CID FTMS 0 0 0 9129 113690.8828125 0.99457660229745 -1 0.0976753234863281 10 Unmodified _ALSGLAVRL_ ENSG00000178947|ENST00000417443|SMIM10L2A;ENSG00000184785|ENST00000330288|SMIM10;ENSG00000196972|ENST00000433425|SMIM10L2B;ENST00000533877.1_1_7:6381544-6388389:-|nuORF;nc|ENSG00000286075|A0A0C4DGP1|SMIM10L3 37.97399986684836 0.0865783450051559 5 [{I|L}A]SG{I|L}A 6 3 54.526 0.0 0.0 6.0681 0.0 0.0 0.0 383.2410982721313 383.2410982721313 42.05136871872881 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + [{I|L}A]SG{I|L}A 6.0681 + + 74 + 1 1.945 49268.3 1.0 4722 4415 9129 SUDHL4_400M_050219_1,9139 SUDHL4_400M_050219_1,9139,ALSGLAVRL True True ALSGLAVRL 49.638503 450.286395251751 948992.75 9129.0 nc|ENSG00000286075|A0A0C4DGP1|SMIM10L3;;ENSG00000196972|ENST00000433425|SMIM10L2B;;ENSG00000178947|ENST00000417443|SMIM10L2A;;ENST00000533877.1_1_7:6381544-6388389:-|nuORF;;ENSG00000184785|ENST00000330288|SMIM10 2.062049388885498 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9140 49.644 291.0 309940.0 25 0 32147.0 + 34174 SLMSHAIEL 9 112 500.7596678784238 999.5047828236476 2 500.7602416872978 MULTI CID FTMS 0 0 0 9129 114061.3828125 0.6393680546869991 -1 0.0976753234863281 11 Unmodified _SLMSHAIEL_ ENSG00000137055|ENST00000397292|PLAA 61.357469665136826 0.0253304979873734 5 {[TV]|[{I|L}S]}[HA]{M(Oxidation (M))|F}A{I|L}E{I|L} 9 3 + 52.854 0.0 0.0 5.2881 5.2881 79.558 0.0 0.0 0.0 11.099367149974016 9.889917747712644 9.889917747712644 1.1263423094075478 0 1.013879331962458 2.0 0.9124379954164592 0.0 {[TV]|[{I|L}S]}[HA]{M(Oxidation (M))|F}A{I|L}E{I|L};{[TV]|[{I|L}S]}[HA]MS{I|L}E{I|L};{[TV]|[{I|L}S]}[HA]SM{I|L}E{I|L};[HS]MA{I|L}S{I|L}E{I|L};{[TV]|[{I|L}S]}[HA]ME{I|L}S{I|L};[HA]{M(Oxidation (M))|F}A{I|L}S{I|L}E{I|L};[HA]SM{I|L}S{I|L}E{I|L};[HS]AM{I|L}S{I|L}E{I|L};{[TV]|[{I|L}S]}[HA]EM{I|L}S{I|L};[HA]S{I|L}{M(Oxidation (M))|F}A{I|L}E{I|L} 5.2881;5.1754;4.4346;4.1776;3.9537;3.8737;3.5725;3.5267;3.4094;3.384 -;-;-;-;-;-;-;-;-;- 567 1 1.945 73253.1 1.0 4723 4415 9129 SUDHL4_400M_050219_1,9140 SUDHL4_400M_050219_1,9140,SLMSHAIEL True True SLMSHAIEL 49.64383 500.760241687298 1064080.5 9129.0 ENSG00000137055|ENST00000397292|PLAA 4.349387009938558 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9141 49.658 800.0 101200.0 25 0 11449.0 19861 LHLQLSLHQKL 11 108 665.4013779946072 1328.7882030560145 2 665.4022704958916 MULTI CID FTMS 0 0 0 9129 88381.1015625 0.4237296890101725 2 -0.165435791015625 12 Unmodified _LHLQLSLHQKL_ ENSG00000128000|ENST00000434248|ZNF780B 9.38312468134398 0.8308777417566128 5 {I|L} 1 10 10.837 0.0 0.0 0.81559 0.0 0.0 1197.6930472716376 0.0 1197.6930472716376 0.0 8.363205328068348 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.81559 + + 106 + 1 1.945 69527.7 0.4600000083446502 4724 4415 9129 SUDHL4_400M_050219_1,9141 SUDHL4_400M_050219_1,9141,LHLQLSLHQKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9142 49.672 800.0 309630.0 25 0 31543.0 -1 0 134 670.6727520240702 2008.9964266724105 3 671.0076171755791 MULTI CID FTMS 0 0 0 9129 87233.4609375 0.1216058796438119 -4 0.4634361267089844 13 5 {[TV]|[{I|L}S]}QK[DV][Y{M(Oxidation (M))|F}]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]} 17 -1 + 94.119 0.0 0.0 4.6849 4.6849 58.228 0.0 0.0 0.0 7.231975075880328 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.5752574989159953 1.4005149978319906 {[TV]|[{I|L}S]}QK[DV][Y{M(Oxidation (M))|F}]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]};{[TV]|[{I|L}S]}QK[DV][Y{M(Oxidation (M))|F}]DG{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};{[TV]|[{I|L}S]}Q[WR][Y{M(Oxidation (M))|F}]DG{M(Oxidation (M))|F}{I|L}H{I|L}K{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}Q[WR][Y{M(Oxidation (M))|F}]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}QK[MT][YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}K{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}QK[MT][YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};[H{I|L}][NP]{I|L}N[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]};[H{I|L}][NP]{I|L}N[YE]DG{M(Oxidation (M))|F}{I|L}H{I|L}K{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}QK{[{M(Oxidation (M))|F}C]|[YS]}HHDG{M(Oxidation (M))|F}{I|L}H{I|L}K{[CP]|[EA]};{[TV]|[{I|L}S]}QK{[{M(Oxidation (M))|F}C]|[YS]}HHDG{M(Oxidation (M))|F}{I|L}H{I|L}Q{[TV]|[{I|L}S]} 4.6849;4.6849;4.5875;4.5875;4.5223;4.5223;4.3249;4.3249;4.2487;4.2487 -;-;-;-;-;-;-;-;-;- 8844 1 1.945 189625.3 0.4399999976158142 4725 4415 9129 SUDHL4_400M_050219_1,9142 SUDHL4_400M_050219_1,9142, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9143 49.682 509.0 164250.0 25 0 15952.0 9293 FIDKFTPPVV 10 125 581.8280336496526 1161.6415143661052 2 581.3278686404228 MULTI CID FTMS 0 0 0 9129 119528.7734375 0.976869111767507 -4 0.4634361267089844 14 Unmodified _FIDKFTPPVV_ ENSG00000204287|ENST00000395388|HLA-DRA 21.53697664764585 0.484802182336468 5 [{I|L}V]TPS{I|L}QY{[QN]|[E{I|L}]|[KN]} 10 9 + 48.689 0.0 0.0 4.1914 4.1914 80.425 0.0 0.0 0.0 15.898255349109505 32.49159686636801 15.898255349109505 4.771212547196626 0 0.805462187404089 1.3010299956639813 0.0 0.0 [{I|L}V]TPS{I|L}QY{[QN]|[E{I|L}]|[KN]};[{I|L}V]TPTVQY{[QN]|[E{I|L}]|[KN]};[{I|L}V]TPS{I|L}[AG]Y{[QN]|[E{I|L}]|[KN]};[{I|L}V]TPTV[AG]Y{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YQ{I|L}SP[VP]V;[VP][{I|L}T]S{I|L}QY{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YQVTP[VP]V;[{I|L}V]{[RE]|[WV]}{I|L}QY{[QN]|[E{I|L}]|[KN]};[{I|L}V]TP[YV][QT]{[QN]|[E{I|L}]|[KN]};[VP][{I|L}T]TVQY{[QN]|[E{I|L}]|[KN]} 4.1914;3.7807;3.4025;2.9918;2.5691;2.3389;2.1583;2.099;2.0831;1.9281 -;-;-;-;-;-;-;-;-;- 358 1 1.945 69151.4 1.0 4726 4415 9129 SUDHL4_400M_050219_1,9143 SUDHL4_400M_050219_1,9143,FIDKFTPPVV False True VLFEGRTVQL 49.681668 581.327868640423 411268.5625 9129.0 nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1;;ENSG00000135049|ENST00000357081|AGTPBP1 1.1034215440352757 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9145 49.686 22.0 1897100.0 25 0 89106.0 -1 0 71 881.4114268818424 1760.8083008304848 2 881.9062988162041 MULTI CID FTMS 0 0 0 9144 1970947.875 0.1129242419867216 -5 0.5673713684082031 1 5 [KT]QY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L} 15 -1 + 76.309 0.0 0.0 4.3337 4.3337 57.137 0.0 0.0 0.0 56.871987629411294 14.304461535987445 14.304461535987445 0.0 0 0.0 0.0 0.0 0.4247425010840047 [KT]QY{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}ADQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}WQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}WQQA[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}ADQQA[CS]V[CG]{I|L};[KT]QY{M(Oxidation (M))|F}AD[AG]QA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ADQ[AG]A[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ADQQA[CS][CG]V{I|L};[KT][AG]Y{M(Oxidation (M))|F}ADQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}AD[AG]QA[CS]C(Carbamidomethyl (C))V{I|L} 4.3337;4.3337;3.9538;3.9538;3.8209;3.8209;3.8209;3.8209;3.8209;3.8209 -;-;-;-;-;-;-;-;-;- 1124 + 1 1.96 36020.4 1.0 4727 4416 9144 SUDHL4_400M_050219_1,9145 SUDHL4_400M_050219_1,9145, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9146 49.688 38.0 3157700.0 25 0 452800.0 + 12693 GVLPNIQAV 9 106 455.7714586385336 909.5283643438672 2 455.7716552615166 MULTI CID FTMS 0 0 0 9144 806782.9375 0.5285094823209577 1 -0.0615005493164062 2 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 67.34385681178166 0.0221257235307089 5 [VG]{I|L}[NP]{I|L}QAV 9 0 + 51.811 0.0 0.0 5.6965 5.6965 91.271 0.0 0.0 0.0 15.902566823223845 8.037815606776924 8.037815606776924 14.76280941356464 0 1.674742501084005 1.5228787452803376 0.0 0.555462187404089 + + [VG]{I|L}[NP]{I|L}QAV;[VG]{I|L}[NP]{I|L}[AG]AV;[VG]{I|L}[NP][KS]PV;R{I|L}{NN|[MP]|[D{I|L}]|[EV]}[TP]PV 5.6965;4.0733;3.144;1.8052 +;-;-;- + 1611 + 1 1.96 95253.3 1.0 4728 4416 9144 SUDHL4_400M_050219_1,9146 SUDHL4_400M_050219_1,9146,GVLPNIQAV True True GVLPNIQAV 49.687648 455.771655261517 24622344.0 9144.0 ENSG00000196747|ENST00000358739|H2AC13;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000276903|ENST00000613174|H2AC16;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000274997|ENST00000377459|H2AC12;;ENSG00000184270|ENST00000331128|H2AC21;;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;;ENSG00000180573|ENST00000377791|H2AC6;;nc|ENSG00000246705|Q9BTM1-2|H2AJ;;ENSG00000246705|ENST00000544848|H2AJ 5.721303304036458 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9147 49.689 80.0 442290.0 25 0 118280.0 + -1 PTKFLHLLIRC 11 59 699.4088777284184 1396.8032025236366 2 699.4089843630791 MULTI CID FTMS 0 0 0 9144 546296.5 0.8300255263352564 1 -0.0615005493164062 3 Carbamidomethyl (C) _PTKFLHLLIRC(Carbamidomethyl (C))_ REV__ENSG00000184634|ENST00000374080|MED12;REV__nc|ENSG00000184634|Q93074-2|MED12;REV__nc|ENSG00000184634|Q93074-3|MED12 0.9622753412299312 0.8706078577147922 5 C 1 -1 1.9897 0.0 0.0 0.14245 0.0 0.0 1012.6189811875024 278.15867029361567 1290.777651481118 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.14245 + + 2 + 1 1.96 36437.8 1.0 4729 4416 9144 SUDHL4_400M_050219_1,9147 SUDHL4_400M_050219_1,9147,PTKFLHLLIRC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9148 49.692 122.0 436330.0 25 0 21094.0 + 19473 KIIGIMEEV 9 98 516.2969319426142 1030.5793109520282 2 516.2952758669853 MULTI CID FTMS 0 0 0 9144 319734.75 0.4354120598040943 1 -0.0615005493164062 4 Unmodified _LFGPKKNLD_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-4|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6 7.910154910731844 0.6385446671287552 5 [K{I|L}]{I|L}G{I|L}MEEV 9 8 [K{I|L}]{I|L}G{I|L}ME + + 25.01 11.136 1.4196 2.4267 2.4267 53.3 0.0 0.0 0.0 0.0 8.230761875901539 0.0 0.0 0 0.4247425010840047 0.0 0.5 0.0 [K{I|L}]{I|L}G{I|L}MEEV 2.4267 - 84 + 1 1.96 49004.9 1.0 4730 4416 9144 SUDHL4_400M_050219_1,9148 SUDHL4_400M_050219_1,9148,LFGPKKNLD False False KIIGIMEEV 49.692011 516.295275866985 5149525.5 9144.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-2|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 3.768776496251424 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9149 49.696 205.0 376150.0 25 0 19667.0 3513 CRRWRYWEYWS 11 109 845.8912356916455 1689.767918450091 2 846.3869506716728 MULTI CID FTMS 0 0 0 9144 198168.953125 0.9411118566111132 1 -0.0615005493164062 5 Unmodified _CRRWRYWEYWS_ ENST00000299314.11_1_12:102159966-102161843:-|nuORF 0.3070304955306653 0.8736993455979228 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQDA{M(Oxidation (M))|F}Y 11 10 94.518 0.0 0.0 5.5935 0.0 0.0 0.0 354.20927939728216 354.20927939728216 39.23902187720805 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.3807196863200843 3.4291746928241125 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQDA{M(Oxidation (M))|F}Y 5.5935 - 6247 1 1.96 56091.7 1.0 4731 4416 9144 SUDHL4_400M_050219_1,9149 SUDHL4_400M_050219_1,9149,CRRWRYWEYWS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9150 49.699 144.0 234140.0 25 0 62469.0 + 18432 KWWKWLRRR 9 65 707.9219535111006 1413.829354089001 2 707.9221069216728 MULTI CID FTMS 0 0 0 9144 176709.0625 0.4331877548612766 1 -0.0615005493164062 6 Unmodified _KWWKWLRRR_ REV__ENST00000461642.2_1_20:25470551-25477423:-|nuORF 0.5247636613948944 0.8963649302248013 5 V 1 -1 1.42 0.0 0.0 0.10044 0.0 0.0 1131.6617648329448 180.07174097232658 1311.7335058052713 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.10044 - 4 + 1 1.96 35200.7 1.0 4732 4416 9144 SUDHL4_400M_050219_1,9150 SUDHL4_400M_050219_1,9150,KWWKWLRRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9151 49.705 357.0 164610.0 25 0 37773.0 + -1 LILKMFSRLT 10 75 619.3716413183721 1236.728729703544 2 619.3718749880791 MULTI CID FTMS 0 0 0 9144 144461.1875 0.3352310448755226 2 -0.1131515502929687 7 Oxidation (M) _LILKM(Oxidation (M))FSRLT_ REV__ENST00000558123.5_1_15:41648320-41650442:+|nuORF 1.6526216038709556 0.7189921496796233 5 Y 1 -1 11.783 0.0 0.0 0.95273 0.0 0.0 1055.6543106135034 0.0 1055.6543106135034 0.0 7.803336530848686 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.95273 - 3 + 1 1.96 49991.4 1.0 4733 4416 9144 SUDHL4_400M_050219_1,9151 SUDHL4_400M_050219_1,9151,LILKMFSRLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9152 49.719 800.0 297550.0 25 0 43480.0 -1 VALSTCQGL 9 146 474.7445777868329 947.4746026404656 2 474.7446166872978 MULTI CID FTMS 0 0 0 9144 100206.1640625 0.6379344422624669 -1 0.1039352416992187 8 Carbamidomethyl (C) _VALSTC(Carbamidomethyl (C))QGL_ ENSG00000145536|ENST00000274181|ADAMTS16;nc|ENSG00000145536|Q8TE57-2|ADAMTS16 15.847184025352805 0.4077185912009129 5 VAVR 4 -1 44.174 0.0 0.0 4.6623 0.0 0.0 0.0 519.1832979791624 519.1832979791624 32.391500778334915 0.0 0.0 0.0 0 0.0968040358200661 0.8860566476931632 0.0 0.7614393726401688 VAVR 4.6623 - 191 + 1 1.96 187078.2 0.4600000083446502 4734 4416 9144 SUDHL4_400M_050219_1,9152 SUDHL4_400M_050219_1,9152,VALSTCQGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9153 49.723 235.0 312090.0 25 0 38298.0 + + 18871 ALSSVIKEL 9 100 480.2924569220358 958.5703609108716 2 480.2932006716728 MULTI CID FTMS 0 0 0 9144 104283.625 0.3671546547372544 -3 0.3013725280761719 9 Unmodified _LASSVISLGL_ ENSG00000204899|ENST00000377818|MZT1 36.12702656103203 0.1984647928738587 5 [{I|L}A]SSV{I|L}[SG]{I|L}{I|L} 10 -1 + 50.358 0.0 0.0 5.2535 5.2535 91.702 0.0 0.0 0.0 35.750195361219824 5.233871898888161 5.233871898888161 50.35843451745941 0 0.75 2.0 0.3807196863200844 0.0 [{I|L}A]SSV{I|L}[SG]{I|L}{I|L} 5.2535 - 125 + 1 1.96 61921.5 1.0 4735 4416 9144 SUDHL4_400M_050219_1,9153 SUDHL4_400M_050219_1,9153,LASSVISLGL False False ALSSVIKEL 49.723494 480.293200671673 1474384.125 9144.0 ENSG00000204899|ENST00000377818|MZT1 3.9737279415130615 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9154 49.729 321.0 215810.0 25 0 30975.0 + 16166 IVDDKFFKL 9 123 375.5496340466125 1123.6270727400376 3 375.5495788455009 MULTI CID FTMS 0 0 0 9144 99889.921875 0.9239646731695852 -1 0.1039352416992187 10 Unmodified _IVDDKFFKL_ ENSG00000124383|ENST00000244230|MPHOSPH10 34.93206674587334 0.1032771302489716 5 [{I|L}V]{I|L}D[YN]{M(Oxidation (M))|F}K{I|L} 9 3 + 42.955 0.0 0.0 3.8229 3.8229 77.904 0.0 0.0 0.0 13.851297213088891 4.978660691108665 4.978660691108665 3.2390874094431794 0 0.3054621874040891 2.0 0.5 0.3252574989159953 [{I|L}V]{I|L}D[YN]{M(Oxidation (M))|F}K{I|L};[{I|L}V]D{I|L}[YN]{M(Oxidation (M))|F}K{I|L} 3.8229;3.5346 -;- 266 + 1 1.96 62601.5 1.0 4736 4416 9144 SUDHL4_400M_050219_1,9154 SUDHL4_400M_050219_1,9154,IVDDKFFKL True True IVDDKFFKL 49.729327 375.549578845501 984107.125 9144.0 ENSG00000124383|ENST00000244230|MPHOSPH10 4.262490590413411 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9155 49.743 800.0 149180.0 25 0 28107.0 -1 MLLFIRKHELK 11 127 743.4354862891331 1484.856419645066 2 743.4351074099541 MULTI CID FTMS 0 0 0 9144 96186.4375 0.5577194350337562 -3 0.3013725280761719 11 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))LLFIRKHELK_ ENST00000320248.3_1_8:1954634-1955009:+|nuORF 2.498486711656943 0.8633599123570009 5 K 1 -1 10.646 0.0 0.0 0.71695 0.0 0.0 1338.750384344088 0.0 1338.750384344088 0.0 -3.5231996561413794 -3.5231996561413794 0.0 0 0.0 0.0 0.0 0.0968040358200661 K 0.71695 + + 117 + 1 1.96 96015.5 0.5600000023841858 4737 4416 9144 SUDHL4_400M_050219_1,9155 SUDHL4_400M_050219_1,9155,MLLFIRKHELK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9157 49.76 800.0 122570.0 25 0 14198.0 + 17781 KQIFETIYY 9 124 602.816082197772 1203.6176114623438 2 602.8163329958916 MULTI CID FTMS 0 0 0 9156 34944.046875 0.0815826624817786 3 -0.1759147644042968 1 Unmodified _KQIFETIYY_ ENSG00000167325|ENST00000300738|RRM1 29.081581746732265 0.1611639662936252 5 PD[KQ]{I|L}YY 7 6 29.411 0.0 0.0 2.4435 0.0 0.0 278.1632252423844 0.0 278.1632252423844 0.0 3.724410446453916 0.0 0.0 0 0.6435078169319297 0.0 0.8494850021680094 0.0 PD[KQ]{I|L}YY 2.4435 - 103 1 1.96 75056.8 0.4600000083446502 4738 4417 9156 SUDHL4_400M_050219_1,9157 SUDHL4_400M_050219_1,9157,KQIFETIYY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9158 49.762 123.0 777290.0 25 0 92905.0 19510 LFLSIPCVL 9 87 502.7975465354031 1003.5805401376062 2 502.7978698611259 MULTI CID FTMS 0 0 0 9156 325240.09375 0.4489400929689733 -2 0.165435791015625 2 Unmodified _LFLSIPCVL_ ENSG00000166796|ENST00000541669|LDHC 32.116972079565 0.1225432171549407 5 {I|L}S{I|L}{I|L}E 5 6 46.454 0.0 0.0 4.6288 0.0 0.0 430.229295799025 0.0 430.229295799025 0.0 33.354706403678875 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 {I|L}S{I|L}{I|L}E 4.6288 - 180 1 1.96 77512.5 1.0 4739 4417 9156 SUDHL4_400M_050219_1,9158 SUDHL4_400M_050219_1,9158,LFLSIPCVL True False FLLSLRGAGA 49.762092 502.797869861126 4369471.0 9156.0 ENSG00000231389|ENST00000419277|HLA-DPA1;;ENST00000479107.1_1_6:33037343-33041347:-|nuORF;;chr6:33065347-33073471|11|13.45|0.09|7.27|-|2|HLA-DPA1,HLA-DPA1|1 4.107887903849284 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9159 49.771 503.0 159200.0 25 0 11769.0 -1 0 81 965.957089004079 1929.8996250749576 2 966.4584228396416 MULTI CID FTMS 0 0 0 9156 193957.90625 0.9373672432469576 -1 0.0615005493164062 3 5 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 40.891 0.0 0.0 2.1188 0.0 0.0 1044.5372276627486 0.0 1044.5372276627486 0.0 19.01863755803668 0.0 0.0 0 1.424742501084005 0.0 0.0 0.4247425010840047 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.1188 - 386 1 1.96 58136.7 1.0 4740 4417 9156 SUDHL4_400M_050219_1,9159 SUDHL4_400M_050219_1,9159, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9160 49.778 361.0 312890.0 25 0 25271.0 + -1 SFRRTRCCFCL 11 94 781.8603413844863 1561.7061298357726 2 782.3591186404228 MULTI CID FTMS 0 0 0 9156 154065.703125 0.1336420563295248 -3 0.2631111145019531 4 3 Carbamidomethyl (C) _SFRRTRC(Carbamidomethyl (C))C(Carbamidomethyl (C))FC(Carbamidomethyl (C))L_ REV__ENSG00000134278|ENST00000409402|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-2|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-3|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-4|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-5|SPIRE1 3.5964929083625545 0.858179447565866 5 [KT]QY{M(Oxidation (M))|F}ADQ[CS]C(Carbamidomethyl (C))V{I|L} 13 -1 + 79.527 0.0 0.0 5.0923 5.0923 59.46 0.0 0.0 0.0 58.07383846254015 1.1314758163126155 1.1314758163126155 0.0 0 0.0 0.0 0.7302046884880937 1.6989700043360187 [KT]QY{M(Oxidation (M))|F}ADQ[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}ADQ[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ADE[C(Carbamidomethyl (C))K]C(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}WQ[CS]C(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}WQ[CS]VC(Carbamidomethyl (C)){I|L};[KT][AG]Y{M(Oxidation (M))|F}ADQ[CS]C(Carbamidomethyl (C))V{I|L};[KT][AG]Y{M(Oxidation (M))|F}ADQ[CS]VC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}ADQ[CS]V[CG]{I|L};[KT]QY{M(Oxidation (M))|F}ADQ[CS][CG]V{I|L};[KT]QY{M(Oxidation (M))|F}WE[C(Carbamidomethyl (C))K]C(Carbamidomethyl (C)){I|L} 5.0923;5.0923;4.747;4.667;4.667;4.5114;4.5114;4.5114;4.5114;4.3237 -;-;-;-;-;-;-;-;-;- 2265 + 1 1.96 84489.4 1.0 4741 4417 9156 SUDHL4_400M_050219_1,9160 SUDHL4_400M_050219_1,9160,SFRRTRCCFCL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9161 49.784 369.0 235280.0 25 0 26584.0 39676 VEEKKPQL 8 120 485.7833400675411 0 485.7822753787041 PEAK CID FTMS 0 0 0 9156 120873.53125 0.7842364530022145 -2 0.165435791015625 5 Unmodified _VEEKKPQL_ ENSG00000061936|ENST00000261674|SFSWAP;ENST00000538548.5_1_12:132198725-132271134:+|nuORF;nc|ENSG00000061936|Q12872-2|SFSWAP 30.22481116460888 0.2280668331718824 5 GEPQ 4 5 24.189 0.0 0.0 2.4948 0.0 0.0 427.2896282778572 128.07195459537346 555.3615828732306 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.805462187404089 GEPQ 2.4948 - 191 + 1 1.96 71941.1 1.0 4742 4417 9156 SUDHL4_400M_050219_1,9161 SUDHL4_400M_050219_1,9161,VEEKKPQL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9162 49.79 292.0 154420.0 25 0 21329.0 + 31281 FLKDLVASV 9 98 495.95889783270695 1484.8548640983208 3 496.2933837771416 MULTI CID FTMS 0 0 0 9156 164183.203125 0.8613718944242581 -1 0.0615005493164062 6 Unmodified _RLWRECVRRVL_ ENSG00000175550|ENST00000312515|DRAP1;ENST00000530791.5_1_11:65687742-65688356:+|nuORF;nc|ENSG00000175550|Q14919-2|DRAP1 1.214830529360525 0.8694162858786273 5 SAV{NN|[MP]|[D{I|L}]|[EV]}RT{I|L} 8 7 26.529 0.0 0.0 1.7866 0.0 0.0 611.3653143930459 0.0 611.3653143930459 0.0 2.6260938178783704 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 SAV{NN|[MP]|[D{I|L}]|[EV]}RT{I|L} 1.7866 - 288 + 1 1.96 44832.8 1.0 4743 4417 9156 SUDHL4_400M_050219_1,9162 SUDHL4_400M_050219_1,9162,RLWRECVRRVL False False FLKDLVASV 49.789506 496.293383777142 962843.5 9156.0 ENSG00000175550|ENST00000312515|DRAP1;;ENST00000530791.5_1_11:65687742-65688356:+|nuORF;;nc|ENSG00000175550|Q14919-2|DRAP1 6.265555699666341 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9163 49.795 287.0 425580.0 25 0 40068.0 + -1 VVLDGQIYV 9 105 1005.5063661816256 2008.998179430051 2 1006.009265124798 MULTI CID FTMS 0 0 0 9156 149747.3125 0.722995166844464 -2 0.165435791015625 7 nc|ENSG00000114648|O94889-2|KLHL18;ENSG00000114648|ENST00000232766|KLHL18 5 {[QG]|[NA]}D{I|L}VV{I|L}Y 8 -1 43.146 0.0 0.0 2.1476 0.0 0.0 0.0 1118.505390432544 1118.505390432544 13.441008622126049 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720984 0.9876954943324544 {[QG]|[NA]}D{I|L}VV{I|L}Y 2.1476 - 3095 1 1.96 83561.4 1.0 4744 4417 9156 SUDHL4_400M_050219_1,9163 SUDHL4_400M_050219_1,9163, False False VVLDGQIYV 49.794821 1006.0092651248 570975.5 9156.0 nc|ENSG00000114648|O94889-2|KLHL18;;ENSG00000114648|ENST00000232766|KLHL18 0.2104285806417465 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9165 49.8 43.0 1176900.0 25 0 65081.0 + 29395 QLDDLKVEL 9 95 536.7973325733155 1071.580112213431 2 536.7979003787041 MULTI CID FTMS 0 0 0 9164 866749.3125 0.1378992917531305 3 -0.2785224914550781 1 Unmodified _QLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 38.17557092003332 0.0854718145212029 5 [Q{I|L}]DD{I|L}KVE{I|L} 9 0 + 43.003 0.0 0.0 4.013 4.013 87.804 0.0 0.0 0.0 15.34328028779893 17.438970923928814 15.34328028779893 43.00253642230527 0 0.3054621874040891 1.5228787452803376 0.805462187404089 0.0 + + [Q{I|L}]DD{I|L}KVE{I|L} 4.013 + + 333 + 1 1.974 43878.2 1.0 4745 4418 9164 SUDHL4_400M_050219_1,9165 SUDHL4_400M_050219_1,9165,QLDDLKVEL True True QLDDLKVEL 49.799914 536.797900378704 71504360.0 9164.0 ENST00000487431.1_1_9:127620199-127623861:-|nuORF;;ENSG00000136942|ENST00000348462|RPL35;;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;;ENST00000495728.1_1_9:127623696-127624209:-|nuORF;;ENST00000450819.1_1_1:237144684-237145005:+|nuORF 5.707878430684407 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9166 49.81 567.0 227050.0 25 0 30148.0 + 34072 SLLESVQKL 9 137 508.803178996838 1015.591805060476 2 508.8043090701103 MULTI CID FTMS 0 0 0 9164 137880.671875 0.1549122036442896 3 -0.2785224914550781 2 Unmodified _SLLESVQKL_ ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR 51.629811660486645 0.0367964933207742 5 {[TV]|[{I|L}S]}{I|L}ESVQK{I|L} 9 0 + 80.785 0.0 0.0 7.9545 7.9545 94.122 0.0 0.0 0.0 30.32544413729355 11.706962271689749 11.706962271689749 9.208187539523747 0 1.274227503252014 2.0 0.4247425010840047 0.6505149978319906 + + {[TV]|[{I|L}S]}{I|L}ESVQK{I|L};{[TV]|[{I|L}S]}{I|L}ESV[AG]K{I|L};{[TV]|[{I|L}S]}{I|L}EK{[DA]|[EG]}K{I|L};{[TV]|[{I|L}S]}{I|L}EKN{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}EKNVT{I|L};{[TV]|[{I|L}S]}{I|L}EKN{I|L}TV;{[TV]|[{I|L}S]}{I|L}{[HG]|PP}[Y{I|L}]T{I|L} 7.9545;7.0478;6.3196;5.6439;5.5331;5.5209;3.9308 +;-;-;-;-;-;- + 862 + 1 1.974 100757.5 1.0 4746 4418 9164 SUDHL4_400M_050219_1,9166 SUDHL4_400M_050219_1,9166,SLLESVQKL True True SLLESVQKL 49.80984 508.80430907011 8874030.0 9164.0 nc|ENSG00000175054|Q13535-3|ATR;;nc|ENSG00000175054|Q13535-2|ATR;;ENSG00000175054|ENST00000350721|ATR 5.557243665059407 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9168 49.815 127.0 348720.0 25 0 48807.0 + 12487 GVARRWRRRQG 11 58 466.6081775910808 1396.8027033734425 3 466.6083557009697 MULTI CID FTMS 0 0 0 9167 234609.46875 0.6908940068247325 3 -0.374847412109375 1 Unmodified _GVARRWRRRQG_ REV__ENST00000367330.5_1_1:201123337-201123409:-|nuORF 1.4819007175156935 0.86815623132643 5 [VG]C(Carbamidomethyl (C)) 3 -1 14.437 0.0 0.0 1.0336 0.0 0.0 0.0 1077.6636596469934 1077.6636596469934 3.327731244245344 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [VG]C(Carbamidomethyl (C)) 1.0336 - 29 1 1.974 46440.4 1.0 4747 4419 9167 SUDHL4_400M_050219_1,9168 SUDHL4_400M_050219_1,9168,GVARRWRRRQG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9169 49.821 349.0 150810.0 25 0 33949.0 + 7768 ELFRKVRKMKP 11 88 716.4352514760735 1430.855950018947 2 716.4361450076103 MULTI CID FTMS 0 0 0 9167 234371.4375 0.9620357601823892 5 -0.544036865234375 2 Unmodified _ELFRKVRKMKP_ REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF 1.1933415558491238 0.8695176722560516 5 C(Carbamidomethyl (C)) 1 -1 3.0989 0.0 0.0 0.21658 0.0 0.0 714.603460860547 553.1887911432249 1267.792252003772 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.21658 - 41 + 1 1.974 49978.3 1.0 4748 4419 9167 SUDHL4_400M_050219_1,9169 SUDHL4_400M_050219_1,9169,ELFRKVRKMKP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9170 49.83 481.0 283670.0 25 0 37487.0 + 9307 FIFSDTHEL 9 123 554.7687584990427 1107.5229640648854 2 554.7692138552666 MULTI CID FTMS 0 0 0 9167 163536.265625 0.1734978277465077 -1 0.0150184631347656 3 Unmodified _FIFSDTHEL_ ENSG00000102699|ENST00000381989|PARP4 39.957323273325 0.0756908302845263 5 {[YC]|[HE]}SS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 9 6 + 40.112 0.0 0.0 3.6217 3.6217 74.877 0.0 0.0 0.0 1.24604148915234 4.234450732443406 1.24604148915234 1.24604148915234 0 0.4247425010840047 0.0 1.3522338482433751 0.0 {[YC]|[HE]}SS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[HT]DS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[YC]|[HE]}SS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[QN]|[E{I|L}]|[KN]};{[YC]|[HE]}SS{M(Oxidation (M))|F}E{I|L}{I|L}{M(Oxidation (M))|F};[HT]DS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[QN]|[E{I|L}]|[KN]};[HT]DS{M(Oxidation (M))|F}E{I|L}{I|L}{M(Oxidation (M))|F};{[YC]|[HE]}SS{M(Oxidation (M))|F}{I|L}E{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}QQDS{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[{I|L}T]{M(Oxidation (M))|F}HDS{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[HT]DS{M(Oxidation (M))|F}{I|L}E{I|L}{M(Oxidation (M))|F} 3.6217;3.5092;3.2883;3.2244;3.1758;3.1119;2.9307;2.8912;2.8516;2.8182 -;-;-;-;-;-;-;-;-;- 917 1 1.974 104589.3 1.0 4749 4419 9167 SUDHL4_400M_050219_1,9170 SUDHL4_400M_050219_1,9170,FIFSDTHEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9171 49.833 169.0 343130.0 25 0 24669.0 + 13463 HLSDMLQQL 9 87 542.776680895705 1083.53880885821 2 542.7773315310478 MULTI CID FTMS 0 0 0 9167 168070.21875 0.3172480017479102 -1 0.0150184631347656 4 Unmodified _HLSDMLQQL_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000562407.1_1_16:23695226-23699079:+|nuORF 25.399314129420983 0.2080152500878129 5 {[TV]|[{I|L}S]}[HD]M{I|L}QQ{I|L} 9 2 + 40.13 0.0 0.0 3.7036 3.7036 83.36 0.0 0.0 0.0 14.999999999999991 8.297862503744707 8.297862503744707 9.208187539523747 0 0.9037474688516562 2.0 0.0 0.0 {[TV]|[{I|L}S]}[HD]M{I|L}QQ{I|L};{[TV]|[{I|L}S]}[HD]M{I|L}[AG]Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HS]M{I|L}QQ{I|L};{[TV]|[{I|L}S]}{[QS]|[NT]}{I|L}[Y{M(Oxidation (M))|F}]N{I|L};{[TV]|[{I|L}S]}{[QS]|[NT]}{I|L}[YQ]{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}[HS]M{I|L}[AG]Q{I|L};{[TV]|[{I|L}S]}{[QS]|[NT]}{I|L}[Y{M(Oxidation (M))|F}]QV;{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}[QP]QQ{I|L};[HT][DV]M{I|L}QQ{I|L};[HT][DV]M{I|L}[AG]Q{I|L} 3.7036;2.8538;2.3192;1.5424;1.5199;1.4694;1.2208;0.98187;0.92392;0.074099 -;-;-;-;-;-;-;-;-;- 200 1 1.974 50378.0 1.0 4750 4419 9167 SUDHL4_400M_050219_1,9171 SUDHL4_400M_050219_1,9171,HLSDMLQQL False True HLSDMLQQL 49.833141 542.777331531048 3247892.25 9167.0 ENST00000562407.1_1_16:23695226-23699079:+|nuORF;;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;;ENSG00000166851|ENST00000300093|PLK1 5.095731099446614 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9172 49.838 261.0 184280.0 25 0 24820.0 18821 LARSRIQG 8 74 450.7726085398795 899.530664146559 2 450.7722961306572 MULTI CID FTMS 0 0 0 9167 127854.78125 0.9695781123177458 -1 0.0150184631347656 5 Unmodified _LARSRIQG_ ENSG00000055609|ENST00000262189|KMT2C;ENSG00000167548|ENST00000301067|KMT2D;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C;nc|ENSG00000167548|O14686-3|KMT2D 2.889219685676258 0.8067950007271085 5 {I|L} 1 7 10.969 0.0 0.0 1.2194 0.0 0.0 768.4357830203857 0.0 768.4357830203857 0.0 9.3753063169585 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2194 + + 13 + 1 1.974 44199.3 1.0 4751 4419 9167 SUDHL4_400M_050219_1,9172 SUDHL4_400M_050219_1,9172,LARSRIQG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9173 49.852 800.0 167060.0 25 0 14370.0 15704 IQSSANAFFQL 11 124 613.3142143597282 1224.6138757862564 2 613.3140136599541 MULTI CID FTMS 0 0 0 9167 121427.921875 0.3756789777786629 4 -0.4541053771972656 6 Unmodified _IQSSANAFFQL_ ENST00000463740.5_1_9:136217403-136218218:+|nuORF 21.59015148037692 0.5852593066373742 5 {I|L}{I|L}AV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]D{M(Oxidation (M))|F}Q{I|L} 10 6 + 39.161 0.0 0.0 3.1978 3.1978 76.289 0.0 0.0 0.0 0.800855193405674 27.170945999809145 0.800855193405674 3.0102999566398125 0 0.2614393726401688 0.619788758288394 0.3807196863200844 0.0 {I|L}{I|L}AV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]D{M(Oxidation (M))|F}Q{I|L};{I|L}{I|L}AV[C(Carbamidomethyl (C))D]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[WK]D{M(Oxidation (M))|F}Q{I|L};[{I|L}A]{I|L}V[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]D{M(Oxidation (M))|F}Q{I|L};[{I|L}A]{I|L}V[C(Carbamidomethyl (C))D]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}A[NP]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q{I|L};{I|L}{I|L}AV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]D{M(Oxidation (M))|F}[AG]{I|L};VVVV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]D{M(Oxidation (M))|F}Q{I|L};{I|L}{I|L}AV[C(Carbamidomethyl (C))D]{M(Oxidation (M))|F}{M(Oxidation (M))|F}[AG]{I|L};{I|L}{I|L}A[PS][CS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q{I|L} 3.1978;2.952;2.8649;2.7411;2.4953;2.4624;2.4494;2.2812;2.2036;2.2036 -;-;-;-;-;-;-;-;-;- 419 1 1.974 100642.0 0.6399999856948853 4752 4419 9167 SUDHL4_400M_050219_1,9173 SUDHL4_400M_050219_1,9173,IQSSANAFFQL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9174 49.866 800.0 143370.0 25 0 22797.0 + 23693 LTSYIKRVL 9 138 546.840286308936 1091.666019684672 2 546.8407470583916 MULTI CID FTMS 0 0 0 9167 119644.921875 0.0720827500962261 8 -0.8952751159667969 7 Unmodified _LTSYIKRVL_ REV__ENSG00000115840|ENST00000422440|SLC25A12;REV__nc|ENSG00000115840|O75746-2|SLC25A12 4.75600775471527 0.7486543447549536 5 {I|L} 1 -1 12.474 0.0 0.0 1.1427 0.0 0.0 960.5710927821314 0.0 960.5710927821314 0.0 2.2931892451282465 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1427 + + 99 + 1 1.974 89718.3 0.6000000238418579 4753 4419 9167 SUDHL4_400M_050219_1,9174 SUDHL4_400M_050219_1,9174,LTSYIKRVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9175 49.879 800.0 72242.0 25 0 14938.0 + 9047 FEKIRRQREKI 11 93 751.9483099775982 1501.8820670219964 2 751.9486572146416 MULTI CID FTMS 0 0 0 9167 109454.59375 1.0 0 0.0 8 Unmodified _FEKIRRQREKI_ REV__ENSG00000077935|ENST00000357450|SMC1B;REV__nc|ENSG00000077935|Q8NDV3-2|SMC1B 1.3295316138638542 0.8688751186870782 5 {I|L} 1 -1 10.837 0.0 0.0 0.72159 0.0 0.0 1370.786972272776 0.0 1370.786972272776 0.0 1.4403250924980693 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.72159 + + 86 + 1 1.974 51069.5 0.6000000238418579 4754 4419 9167 SUDHL4_400M_050219_1,9175 SUDHL4_400M_050219_1,9175,FEKIRRQREKI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9176 49.884 256.0 226800.0 25 0 16753.0 + 11946 GMVETRVFL 9 91 526.2835119212722 1050.5524709093445 2 526.2844116091728 MULTI CID FTMS 0 0 0 9167 93875.9140625 0.8893909921912586 1 -0.1092453002929687 9 Unmodified _GMVETRVFL_ ENSG00000120063|ENST00000439174|GNA13;nc|ENSG00000120063|Q14344-2|GNA13 29.081581746732265 0.1611639662936252 5 {[MG]|[TS]}VE 4 5 24.253 0.0 0.0 2.3085 0.0 0.0 0.0 631.3584216695677 631.3584216695677 8.67159720058083 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.4247425010840047 0.0 + {[MG]|[TS]}VE 2.3085 + + 64 + 1 1.974 52495.7 1.0 4755 4419 9167 SUDHL4_400M_050219_1,9176 SUDHL4_400M_050219_1,9176,GMVETRVFL False True GMVETRVFL 49.884256 526.284411609173 547259.875 9167.0 nc|ENSG00000120063|Q14344-2|GNA13;;ENSG00000120063|ENST00000439174|GNA13 3.133285164833069 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9177 49.896 582.0 184730.0 25 0 17730.0 + + -1 ILADWNEDIEA 11 119 644.8065937613499 1287.5986345894996 2 644.8063232302666 MULTI CID FTMS 0 0 0 9167 94212.21875 0.938625075791835 1 -0.1092453002929687 10 Carbamidomethyl (C) _IEC(Carbamidomethyl (C))DPTQLLAE_ nc|ENSG00000116406|Q9BZQ6-2|EDEM3;ENSG00000116406|ENST00000318130|EDEM3 27.22323531849824 0.4529927607131788 5 {I|L}{I|L}ADWNED 8 -1 34.548 0.0 0.0 2.6831 0.0 0.0 0.0 328.1515439955661 328.1515439955661 13.824543621168395 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.4247425010840047 {I|L}{I|L}ADWNED 2.6831 - 716 1 1.974 84773.1 1.0 4756 4419 9167 SUDHL4_400M_050219_1,9177 SUDHL4_400M_050219_1,9177,IECDPTQLLAE False False ILADWNEDIEA 49.895931 644.806323230267 836064.75 9167.0 nc|ENSG00000116406|Q9BZQ6-2|EDEM3;;ENSG00000116406|ENST00000318130|EDEM3 5.467252731323242 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9178 49.901 255.0 616580.0 25 0 135320.0 37361 TKPPAKVVVPT 11 111 568.8534480120255 1135.692343090851 2 568.8538085818291 MULTI CID FTMS 0 0 0 9167 94087.6875 0.0846480349144614 -2 0.0666694641113281 11 Unmodified _TKPPAKVVVPT_ ENSG00000050820|ENST00000162330|BCAR1;nc|ENSG00000050820|P56945-2|BCAR1;nc|ENSG00000050820|P56945-3|BCAR1;nc|ENSG00000050820|P56945-5|BCAR1;nc|ENSG00000050820|P56945-6|BCAR1;nc|ENSG00000050820|P56945-7|BCAR1;nc|ENSG00000050820|P56945-8|BCAR1 2.498486711656943 0.8633599123570009 5 {I|L} 1 11 8.5387 0.0 0.0 0.75185 0.0 0.0 1004.59709575374 0.0 1004.59709575374 0.0 1.5490195998574308 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.75185 - 19 + 1 1.974 120809.4 1.0 4757 4419 9167 SUDHL4_400M_050219_1,9178 SUDHL4_400M_050219_1,9178,TKPPAKVVVPT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9179 49.903 112.0 430830.0 25 0 38968.0 + 42586 VTRDAEEQAP 10 85 558.271212172335 1114.52787141147 2 558.2723876833916 MULTI CID FTMS 0 0 0 9167 115079.375 1.0 0 0.0 12 Unmodified _VTRDAEEQAP_ REV__ENSG00000185272|ENST00000400577|RBM11;REV__ENST00000461088.1_1_21:15588507-15593491:+|nuORF;REV__ENST00000468643.5_1_21:15588507-15591957:+|nuORF;REV__ENST00000495055.1_1_21:15588507-15593471:+|nuORF;REV__nc|ENSG00000185272|P57052-3|RBM11 20.41453444215458 0.5050059513928961 5 [VS]{I|L}DY{M(Oxidation (M))|F}MQ{I|L} 9 -1 + 54.892 0.0 0.0 4.9251 4.9251 84.073 0.0 0.0 0.0 16.368314134112047 0.3562164630582742 0.3562164630582742 6.669971236819677 0 0.3494850021680094 1.5228787452803376 0.0 0.3807196863200844 [VS]{I|L}DY{M(Oxidation (M))|F}MQ{I|L};{[TV]|[{I|L}S]}NEEQD{I|L}[PA];{[TV]|[{I|L}S]}NEVA[WE][PA];[VS]{I|L}DY{M(Oxidation (M))|F}M[AG]{I|L};{[TV]|[{I|L}S]}NEWW{I|L}[PA];{[TV]|[{I|L}S]}GGEEQD{I|L}[PA];[VS]QEEQD{I|L}[PA];[VS]{I|L}DQ{M(Oxidation (M))|F}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L};[AG]DVTEQD{I|L}[PA];{[TV]|[{I|L}S]}A[DG]EQD{I|L}[PA] 4.9251;4.3267;4.0996;3.7573;3.5771;3.5044;3.4729;3.431;3.3831;3.3733 -;-;-;-;-;-;-;-;-;- 1015 + 1 1.974 42415.3 1.0 4758 4419 9167 SUDHL4_400M_050219_1,9179 SUDHL4_400M_050219_1,9179,VTRDAEEQAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9180 49.905 102.0 787420.0 25 0 199450.0 + 44251 YLKLDRRR 8 66 560.340182616347 1118.6658122994938 2 560.3412353396416 MULTI CID FTMS 0 0 0 9167 117217.90625 0.0706115482244013 -2 0.0666694641113281 13 Unmodified _YLKLDRRR_ REV__ENST00000354050.8_2_20:44527440-44527479:-|nuORF 0.7936320650641473 0.8195151834710337 5 P 1 -1 1.5938 0.0 0.0 0.14247 0.0 0.0 898.534676290508 120.05082117252186 1018.5854974630298 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.14247 - 1 + 1 1.974 66448.6 1.0 4759 4419 9167 SUDHL4_400M_050219_1,9180 SUDHL4_400M_050219_1,9180,YLKLDRRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9181 49.919 800.0 126010.0 25 0 10103.0 + 25152 MQYPGRSLVF 10 120 599.3081255148485 1196.6016980964969 2 599.3091918826103 MULTI CID FTMS 0 0 0 9167 101878.0078125 1.0 0 0.0 14 Unmodified _MQYPGRSLVF_ ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24 43.9818466556824 0.1155196613165264 5 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YP[KP]{[MG]|[TS]}V{M(Oxidation (M))|F} 10 3 + 41.929 0.0 0.0 3.504 3.504 74.828 0.0 0.0 0.0 11.509009156570684 5.7306842758112 5.7306842758112 1.4612803567823818 0 1.6549471895720984 1.3010299956639813 0.0 0.3494850021680094 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YP[KP]{[MG]|[TS]}V{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YP{[QV]|[N{I|L}]|[RA]|[KV]}[VS]V{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YPDVV[KA]{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}GYP[KP]{[MG]|[TS]}V{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}GYP{[QV]|[N{I|L}]|[RA]|[KV]}[VS]V{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}YP{[QV]|[N{I|L}]|[RA]|[KV]}[R{I|L}]Y;{[DS]|[MA]|[CV]|TT}GYPDVV[KA]{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}GYP{[QV]|[N{I|L}]|[RA]|[KV]}[R{I|L}]Y;[KC]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VVVC(Carbamidomethyl (C))V{M(Oxidation (M))|F} 3.504;3.3819;2.8974;2.5675;2.4454;2.2672;1.961;1.3271;0.99687 -;-;-;-;-;-;-;-;- 235 + 1 1.974 78932.2 0.4900000095367431 4760 4419 9167 SUDHL4_400M_050219_1,9181 SUDHL4_400M_050219_1,9181,MQYPGRSLVF True True MQYPGRSLVF 49.919083 599.30919188261 854980.4375 9167.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 6.417907396952312 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9183 49.926 124.0 889530.0 25 0 394290.0 -1 0 56 670.6727520240702 2008.9964266724105 3 671.0074951052666 MULTI CID FTMS 0 0 0 9182 426295.34375 0.5942676090992384 1 -0.1542587280273437 1 5 G{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]} 8 -1 31.401 0.0 0.0 1.563 0.0 0.0 1095.4943104474626 0.0 1095.4943104474626 0.0 4.974250108400469 0.0 0.0 0 0.5994850021680094 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H{I|L}Q{[CP]|[EA]} 1.563 - 140 1 1.966 90946.3 1.0 4761 4420 9182 SUDHL4_400M_050219_1,9183 SUDHL4_400M_050219_1,9183, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9184 49.932 338.0 325020.0 25 0 24356.0 + + 22751 RLVEIQYEL 9 113 581.8280336496526 1161.6415143661052 2 581.8277465701103 MULTI CID FTMS 0 0 0 9182 334628.09375 0.8242764093164234 1 -0.1542587280273437 2 Unmodified _LQLQKQYEI_ ENST00000551455.5_1_12:110388962-110434038:-|nuORF;nc|ENSG00000139436|Q14161-3|GIT2;nc|ENSG00000139436|Q14161-5|GIT2;nc|ENSG00000139436|Q14161-11|GIT2;nc|ENSG00000139436|Q14161-2|GIT2;nc|ENSG00000139436|Q14161-8|GIT2;nc|ENSG00000139436|Q14161-10|GIT2;nc|ENSG00000139436|Q14161-9|GIT2;nc|ENSG00000139436|Q14161-4|GIT2;nc|ENSG00000139436|Q14161-6|GIT2;nc|ENSG00000139436|Q14161-7|GIT2;ENSG00000139436|ENST00000355312|GIT2 36.12702656103203 0.0967173616627612 5 [{I|L}V]RE{I|L}QYE{I|L} 9 -1 + 62.251 0.0 0.0 5.3589 5.3589 79.875 0.0 0.0 0.0 1.158197815704085 16.478174818886373 1.158197815704085 1.158197815704085 0 0.9604093769761876 0.6777807052660807 0.0 0.3807196863200844 [{I|L}V]RE{I|L}QYE{I|L};{[QN]|[E{I|L}]|[KN]}VR{I|L}QYE{I|L};[{I|L}V]RE{I|L}[AG]YE{I|L};{[QN]|[E{I|L}]|[KN]}VR{I|L}[AG]YE{I|L};[Q{I|L}][KQ]{I|L}QYE{I|L};[AG]{I|L}[KQ]{I|L}QYE{I|L};[{I|L}V]N[RK]QYE{I|L};[Q{I|L}][KQ]{I|L}[AG]YE{I|L};[AG]{I|L}[KQ]{I|L}[AG]YE{I|L};[AG]VV[RK]QYE{I|L} 5.3589;5.2591;4.5662;4.4665;4.2505;4.2456;3.5931;3.4578;3.4567;2.8906 -;-;-;-;-;-;-;-;-;- 233 1 1.966 84750.7 1.0 4762 4420 9182 SUDHL4_400M_050219_1,9184 SUDHL4_400M_050219_1,9184,LQLQKQYEI False False RLVEIQYEL 49.931651 581.82774657011 2773922.0 9182.0 ENST00000551455.5_1_12:110388962-110434038:-|nuORF;;nc|ENSG00000139436|Q14161-3|GIT2;;nc|ENSG00000139436|Q14161-5|GIT2;;nc|ENSG00000139436|Q14161-11|GIT2;;nc|ENSG00000139436|Q14161-2|GIT2;;nc|ENSG00000139436|Q14161-8|GIT2;;nc|ENSG00000139436|Q14161-10|GIT2;;nc|ENSG00000139436|Q14161-9|GIT2;;nc|ENSG00000139436|Q14161-4|GIT2;;nc|ENSG00000139436|Q14161-6|GIT2;;nc|ENSG00000139436|Q14161-7|GIT2;;ENSG00000139436|ENST00000355312|GIT2 5.06549596786499 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9185 49.933 75.0 672250.0 25 0 74745.0 + 33743 SLAGDVALQQL 11 76 557.8084520604791 1113.602351187758 2 557.8091308474541 MULTI CID FTMS 0 0 0 9182 723190.5 0.5854247597977417 -1 0.1092453002929687 3 Unmodified _SLAGDVALQQL_ ENSG00000010292|ENST00000315579|NCAPD2 62.57269311338072 0.058704053366003 5 [AG]{I|L}ERS 6 8 28.332 0.0 0.0 2.5442 0.0 0.0 0.0 497.2724311040269 497.2724311040269 3.437326732789181 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5 0.0 [AG]{I|L}ERS 2.5442 - 694 1 1.966 44220.7 1.0 4763 4420 9182 SUDHL4_400M_050219_1,9185 SUDHL4_400M_050219_1,9185,SLAGDVALQQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9186 49.938 235.0 456930.0 25 0 42271.0 + 44294 YLLPKDIKL 9 93 551.8472868526948 1101.6800207721894 2 551.8475829958916 MULTI CID FTMS 0 0 0 9182 319503.375 1.0 0 0.0 4 Unmodified _YLLPKDIKL_ ENSG00000122035|ENST00000241463|RASL11A 59.36838082759317 0.0264317782606298 5 {I|L}Y{I|L}PKD{I|L}K{I|L} 9 2 + 84.28 0.0 0.0 7.6501 7.6501 87.694 0.0 0.0 0.0 44.51245851273343 10.857667579416573 10.857667579416573 3.0102999566398125 0 1.6307196863200843 1.6989700043360187 0.805462187404089 0.2396518287104437 {I|L}Y{I|L}PKD{I|L}K{I|L};Y{I|L}{I|L}PKD{I|L}K{I|L} 7.6501;7.3769 -;+ + 336 + 1 1.966 84865.0 1.0 4764 4420 9182 SUDHL4_400M_050219_1,9186 SUDHL4_400M_050219_1,9186,YLLPKDIKL True True YLLPKDIKL 49.937818 551.847582995892 1732232.875 9182.0 ENSG00000122035|ENST00000241463|RASL11A 3.2743879556655884 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9187 49.952 800.0 272640.0 25 0 53657.0 + 11510 GILSVLRSVPL 11 141 577.3669220007798 1152.7192910683596 2 577.3672363162041 MULTI CID FTMS 0 0 0 9182 310590.8125 0.979762039485799 -1 0.1092453002929687 5 Unmodified _GILSVLRSVPL_ REV__ENSG00000129084|ENST00000396394|PSMA1;REV__ENST00000526443.5_1_11:14535901-14541492:-|nuORF;REV__ENST00000528307.5_1_11:14535901-14541893:-|nuORF;REV__nc|ENSG00000129084|P25786-2|PSMA1 2.9952420565917617 0.861016188266951 5 Y 1 -1 10.181 0.0 0.0 0.88322 0.0 0.0 971.6449024958972 0.0 971.6449024958972 0.0 2.447652563507412 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.88322 - 31 + 1 1.966 161605.3 0.949999988079071 4765 4420 9182 SUDHL4_400M_050219_1,9187 SUDHL4_400M_050219_1,9187,GILSVLRSVPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9188 49.961 508.0 318980.0 25 0 12422.0 -1 0 129 887.4125322760457 1772.8105116188913 2 887.9047119021416 MULTI CID FTMS 0 0 0 9182 193981.5 0.2598021029905538 -5 0.3413505554199219 6 5 [KT]KY{M(Oxidation (M))|F}ADQQA[WD]C(Carbamidomethyl (C)){I|L} 14 -1 + 82.675 0.0 0.0 4.6635 4.6635 84.803 0.0 0.0 0.0 34.24722091161827 10.60293137896548 10.60293137896548 9.050244867691433 0 0.0 0.0 0.2742275032520141 1.4049471895720984 [KT]KY{M(Oxidation (M))|F}ADQQA[WD]C(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQA[WD][CG]{I|L};[KT]KY{M(Oxidation (M))|F}ADQ[AG]A[WD]C(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}AD[AG]QA[WD]C(Carbamidomethyl (C)){I|L};[KT]KYA{M(Oxidation (M))|F}DQQA[WD]C(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}WQQA[WD]C(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}WQQA[WD]C(Carbamidomethyl (C)){I|L};[KT]KYA{M(Oxidation (M))|F}DQQA[WD][CG]{I|L};[KT]KYA{M(Oxidation (M))|F}DQ[AG]A[WD]C(Carbamidomethyl (C)){I|L};[KT]KYA{M(Oxidation (M))|F}D[AG]QA[WD]C(Carbamidomethyl (C)){I|L} 4.6635;4.153;4.153;4.153;4.1267;4.1039;4.1039;3.6162;3.6162;3.6162 -;-;-;-;-;-;-;-;-;- 6570 + 1 1.966 113597.5 1.0 4766 4420 9182 SUDHL4_400M_050219_1,9188 SUDHL4_400M_050219_1,9188, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9189 49.974 800.0 183200.0 25 0 61483.0 + 20129 LKLSRRPHLV 10 87 609.8926190440266 1217.770685154853 2 609.8926879763603 MULTI CID FTMS 0 0 0 9182 174325.78125 0.9549099610593148 -1 0.1092453002929687 7 Unmodified _LKLSRRPHLV_ REV__ENSG00000128294|ENST00000338754|TPST2 1.4819007175156935 0.719781833666733 5 Y 1 -1 10.837 0.0 0.0 0.88994 0.0 0.0 1036.696891675164 0.0 1036.696891675164 0.0 0.6563945731965948 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.88994 - 10 + 1 1.966 110590.1 0.6600000262260437 4767 4420 9182 SUDHL4_400M_050219_1,9189 SUDHL4_400M_050219_1,9189,LKLSRRPHLV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9190 49.988 800.0 202130.0 25 0 28694.0 + 13218 HGQRGRTRQIV 11 138 654.3741819941383 1306.7338110550766 2 654.3742553591728 MULTI CID FTMS 0 0 0 9182 162233.953125 0.832487093530084 -1 0.1092453002929687 8 Unmodified _HGQRGRTRQIV_ REV__ENST00000525164.5_1_1:1248165-1249114:-|nuORF 2.9952420565917617 0.861016188266951 5 {I|L} 1 -1 10.278 0.0 0.0 0.78651 0.0 0.0 1175.638441647653 0.0 1175.638441647653 0.0 7.803336530848686 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.78651 + + 122 + 1 1.966 132601.1 0.6399999856948853 4768 4420 9182 SUDHL4_400M_050219_1,9190 SUDHL4_400M_050219_1,9190,HGQRGRTRQIV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9191 50.002 800.0 180410.0 25 0 9133.5 -1 0 121 921.9390573709636 1841.863561808727 2 921.9365112185478 MULTI CID FTMS 0 0 0 9182 147787.21875 1.0 0 0.0 9 5 [YQ]{M(Oxidation (M))|F}WV[YT]DA{M(Oxidation (M))|F}YQV{I|L} 14 -1 + 102.6 0.0 0.0 5.5706 5.5706 61.008 0.0 0.0 0.0 3.829087576549597 16.667853209646182 3.829087576549597 0.0 0 0.9916440611282626 0.0 0.75 1.5044321917401078 [YQ]{M(Oxidation (M))|F}WV[YT]DA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}WV[YT]DA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}W[YT]DA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}W[YT]DA{M(Oxidation (M))|F}YQV{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}YQV[YT]DA{M(Oxidation (M))|F}YQV{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}YQV[YT]DA{M(Oxidation (M))|F}YKV{I|L};[Y{M(Oxidation (M))|F}]QWV[YT]DA{M(Oxidation (M))|F}YQV{I|L};[Y{M(Oxidation (M))|F}]QWV[YT]DA{M(Oxidation (M))|F}YKV{I|L};[YQ]{M(Oxidation (M))|F}{[DA]|[EG]}V[YT]DA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}WV[YT]DA{M(Oxidation (M))|F}Y[AG]V{I|L} 5.5706;5.5706;5.3627;5.3627;5.262;5.262;5.2438;5.2438;5.0793;5.0793 -;-;-;-;-;-;-;-;-;- 5908 1 1.966 99933.8 0.6299999952316284 4769 4420 9182 SUDHL4_400M_050219_1,9191 SUDHL4_400M_050219_1,9191, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9192 50.01 372.0 249210.0 25 0 91698.0 + 35861 SVLHLVKRKR 10 64 618.4057783834162 1234.7970038336323 2 618.4058105349541 MULTI CID FTMS 0 0 0 9182 119726.484375 0.7193056698596506 -1 0.1092453002929687 10 Unmodified _SVLHLVKRKR_ REV__ENSG00000136237|ENST00000665637|RAPGEF5;REV__nc|ENSG00000136237|Q92565-2|RAPGEF5;REV__nc|ENSG00000136237|Q92565|RAPGEF5 0.4007161486938917 0.7247829448918255 5 A 1 -1 3.0989 0.0 0.0 0.25097 0.0 0.0 864.5762834740605 296.1619661920532 1160.7382496661137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.25097 - 1 + 1 1.966 76580.5 1.0 4770 4420 9182 SUDHL4_400M_050219_1,9192 SUDHL4_400M_050219_1,9192,SVLHLVKRKR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9193 50.016 288.0 285600.0 25 0 19455.0 + 1427 ALDQEIIEV 9 120 515.2766247034974 1028.5386964737947 2 515.2769653201103 MULTI CID FTMS 0 0 0 9182 123907.046875 1.0 0 0.0 11 Unmodified _ALDQEIIEV_ ENSG00000182774|ENST00000647841|RPS17;ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF 22.736283301280096 0.2418982879461534 5 [EP]CA{I|L}{I|L}REV 9 6 + 38.409 0.0 0.0 3.7343 3.7343 75.554 0.0 0.0 0.0 7.147642715192507 5.228787452803374 5.228787452803374 1.5757731917779338 0 0.0 0.0 0.5 0.0 [EP]CA{I|L}{I|L}REV;[EP]CA{I|L}{I|L}ERV;[EP]CA{I|L}{I|L}RD{I|L};[EP]V{[MG]|[TS]}{I|L}REV;[EP]V{[MG]|[TS]}{I|L}ERV;[EP]{[WT]|[RM]}{I|L}REV;[EP]{[WT]|[RM]}{I|L}ERV;{NN|[MP]|[D{I|L}]|[EV]}AAG[Y{I|L}]V[HA];{NN|[MP]|[D{I|L}]|[EV]}AQ[Y{I|L}]V[HA];[EP]V{[MG]|[TS]}{I|L}RD{I|L} 3.7343;3.5811;3.2259;2.0327;1.8795;1.8668;1.7136;1.7083;1.5371;1.5243 -;-;-;-;-;-;-;-;-;- 425 + 1 1.966 63148.9 1.0 4771 4420 9182 SUDHL4_400M_050219_1,9193 SUDHL4_400M_050219_1,9193,ALDQEIIEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9194 50.023 434.0 107610.0 25 0 30154.0 14424 IFNLYRFKRGK 11 70 721.4221185689704 1440.8296842047407 2 721.4219238162041 MULTI CID FTMS 0 0 0 9182 91426.765625 0.2144091118888201 -4 0.2374153137207031 12 Unmodified _IFNLYRFKRGK_ ENST00000305949.5_1_8:121519055-121522193:+|nuORF 0.4082653385326392 0.873221713011348 5 {I|L} 1 10 9.9148 0.0 0.0 0.68813 0.0 0.0 1309.7350624779813 0.0 1309.7350624779813 0.0 5.9354332167857216 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.68813 + + 10 + 1 1.966 50429.5 1.0 4772 4420 9182 SUDHL4_400M_050219_1,9194 SUDHL4_400M_050219_1,9194,IFNLYRFKRGK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9195 50.034 619.0 187270.0 25 0 17900.0 + 29471 QLIPALAKV 9 120 476.81216281198135 951.6097726907628 2 476.8133117556572 MULTI CID FTMS 0 0 0 9182 118179.0390625 1.0 0 0.0 13 Unmodified _QLIPALAKV_ ENSG00000064655|ENST00000327619|EYA2;ENSG00000104313|ENST00000340726|EYA1;ENSG00000112319|ENST00000355286|EYA4;ENST00000496494.5_1_8:72111577-72234167:-|nuORF;nc|ENSG00000064655|O00167-2|EYA2;nc|ENSG00000104313|Q99502-2|EYA1;nc|ENSG00000104313|Q99502-3|EYA1;nc|ENSG00000112319|O95677-2|EYA4;nc|ENSG00000112319|O95677-4|EYA4;nc|ENSG00000112319|O95677-5|EYA4 49.93300154707207 0.0405168250806675 5 [Q{I|L}]{I|L}PA{I|L}AKV 9 0 + 51.328 0.0 0.0 5.3938 5.3938 89.889 0.0 0.0 0.0 16.2562103813219 10.833328991650248 10.833328991650248 11.679339967635345 0 1.2614393726401687 2.0 0.0 0.2215141619232908 + + [Q{I|L}]{I|L}PA{I|L}AKV;[Q{I|L}]{I|L}PK[RV]V;[Q{I|L}]{I|L}P[RV]KV;[PA]{I|L}AKV[RV]V;[VP]KRV[RV]V;[VP][VG]KV[RV]V;[AG]{I|L}{I|L}PK[RV]V;[PA]{I|L}{I|L}GK[RV]V;[VP]K[VG]V[RV]V 5.3938;4.1665;4.1098;3.6023;2.0335;1.8779;1.8219;1.7854;1.0602 +;-;-;-;-;-;-;-;- + 267 + 1 1.966 93262.5 1.0 4773 4420 9182 SUDHL4_400M_050219_1,9195 SUDHL4_400M_050219_1,9195,QLIPALAKV True True QLIPALAKV 50.034105 476.813311755657 1262690.625 9182.0 nc|ENSG00000112319|O95677-4|EYA4;;ENST00000496494.5_1_8:72111577-72234167:-|nuORF;;ENSG00000112319|ENST00000355286|EYA4;;nc|ENSG00000104313|Q99502-3|EYA1;;nc|ENSG00000104313|Q99502-2|EYA1;;nc|ENSG00000064655|O00167-2|EYA2;;nc|ENSG00000112319|O95677-2|EYA4;;ENSG00000064655|ENST00000327619|EYA2;;nc|ENSG00000112319|O95677-5|EYA4;;ENSG00000104313|ENST00000340726|EYA1 6.008366107940674 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9196 50.04 229.0 155010.0 25 0 14343.0 -1 0 59 595.9302526932388 1784.7689286799164 3 595.9303466677666 MULTI CID FTMS 0 0 0 9182 118218.2109375 1.0 0 0.0 14 5 Y{M(Oxidation (M))|F}ANQQA 7 -1 36.982 0.0 0.0 2.0721 0.0 0.0 358.204546494008 601.1582735650999 959.362820059108 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F}ANQQA 2.0721 - 128 + 1 1.966 35867.3 1.0 4774 4420 9182 SUDHL4_400M_050219_1,9196 SUDHL4_400M_050219_1,9196, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9197 50.053 800.0 123530.0 25 0 16735.0 + 13166 HFRLKKRRES 10 109 678.9012188382304 1355.7878847432607 2 678.9013549685478 MULTI CID FTMS 0 0 0 9182 111683.4765625 0.8987975132289138 -1 0.1092453002929687 15 Unmodified _HFRLKKRRES_ REV__ENSG00000204371|ENST00000375537|EHMT2;REV__ENST00000480912.5_1_6:31847863-31860642:-|nuORF;REV__nc|ENSG00000204371|Q96KQ7-2|EHMT2 3.5964929083625545 0.7100006075494749 5 Q 1 -1 9.6041 0.0 0.0 0.70838 0.0 0.0 1209.7179364784154 0.0 1209.7179364784154 0.0 0.5697167615341847 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.70838 - 96 + 1 1.966 81841.6 0.550000011920929 4775 4420 9182 SUDHL4_400M_050219_1,9197 SUDHL4_400M_050219_1,9197,HFRLKKRRES False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9198 50.06 339.0 252740.0 25 0 23029.0 + -1 RLLDMGFEA 9 103 526.2645255178032 1050.5144981024064 2 526.2656127810478 MULTI CID FTMS 0 0 0 9182 93924.3515625 1.0 0 0.0 16 Oxidation (M) _LLM(Oxidation (M))PPHQEA_ ENST00000539934.5_1_12:124093257-124102497:+|nuORF;ENSG00000111364|ENST00000238146|DDX55;ENST00000542286.5_1_12:124093257-124104017:+|nuORF 21.74664581756881 0.2544899275067181 5 {I|L}{I|L}[RD]MG{M(Oxidation (M))|F}EA 9 -1 + 41.212 0.0 0.0 3.923 3.923 74.243 0.0 0.0 0.0 0.2118929906993827 16.478174818886377 0.2118929906993827 0.2118929906993827 0 0.6139829889124311 0.8239087409443188 0.0 0.0 {I|L}{I|L}[RD]MG{M(Oxidation (M))|F}EA;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]MG{M(Oxidation (M))|F}EA;{[QN]|[E{I|L}]|[KN]}[RV]MG{M(Oxidation (M))|F}EA;{I|L}{I|L}[RD]M[W{M(Oxidation (M))|F}]A;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]M[W{M(Oxidation (M))|F}]A;{[QN]|[E{I|L}]|[KN]}[RV]M[W{M(Oxidation (M))|F}]A 3.923;3.9028;2.938;1.4984;1.4782;0.51337 -;-;-;-;-;- 90 1 1.966 68411.1 1.0 4776 4420 9182 SUDHL4_400M_050219_1,9198 SUDHL4_400M_050219_1,9198,LLMPPHQEA False False RLLDMGFEA 50.059584 526.265612781048 870358.875 9182.0 ENST00000539934.5_1_12:124093257-124102497:+|nuORF;;ENSG00000111364|ENST00000238146|DDX55;;ENST00000542286.5_1_12:124093257-124104017:+|nuORF 4.6069895426432295 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9199 50.073 800.0 74902.0 25 0 10197.0 + -1 LHLCQGKLPL 10 95 589.8407997033744 1177.667046473549 2 589.8409911990166 MULTI CID FTMS 0 0 0 9182 92617.5078125 1.0 0 0.0 17 Carbamidomethyl (C) _LHLC(Carbamidomethyl (C))QGKLPL_ REV__ENST00000496978.5_1_4:154143465-154143747:+|nuORF 1.844237919475145 0.7181058121064529 5 {I|L} 1 -1 9.5329 0.0 0.0 0.80947 0.0 0.0 1046.5715702546015 0.0 1046.5715702546015 0.0 7.93909776106676 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80947 + + 11 + 1 1.966 50561.3 0.5 4777 4420 9182 SUDHL4_400M_050219_1,9199 SUDHL4_400M_050219_1,9199,LHLCQGKLPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9201 50.078 3.2 20886000.0 25 0 1182700.0 -1 0 74 881.4114268818424 1760.8083008304848 2 881.9144775271416 MULTI CID FTMS 0 0 0 9200 17453718.0 1.0 0 0.0 1 5 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 12 -1 71.31 0.0 0.0 4.0499 0.0 0.0 358.2234064731465 0.0 358.2234064731465 0.0 57.35776296228558 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.8494850021680094 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 4.0499 - 2502 + 1 1.953 49567.2 1.0 4778 4421 9200 SUDHL4_400M_050219_1,9201 SUDHL4_400M_050219_1,9201, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9202 50.079 42.0 1257500.0 25 0 169890.0 + 33901 SLFPNSPKW 9 70 538.2821204818024 1074.5496880304047 2 538.2829467654228 MULTI CID FTMS 0 0 0 9200 974444.125 0.8078026228977508 1 -0.1113433837890625 2 Unmodified _SLFPNSPKW_ ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF 28.23362336080872 0.1719529537093671 5 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW 9 0 + 80.723 0.0 0.0 7.5123 7.5123 93.418 0.0 0.0 0.0 60.59971676341242 12.25268461881508 12.25268461881508 9.208187539523747 0 0.7742275032520141 2.0 0.3807196863200844 0.0 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]SPKW 7.5123;6.6553;6.3752 +;-;- + 262 + 1 1.953 44289.2 1.0 4779 4421 9200 SUDHL4_400M_050219_1,9202 SUDHL4_400M_050219_1,9202,SLFPNSPKW False True SLFPNSPKW 50.07934 538.282946765423 23839484.0 9200.0 ENST00000531200.1_1_11:102398162-102401431:-|nuORF;;ENST00000533366.5_1_11:102395628-102401431:-|nuORF;;ENSG00000137673|ENST00000260227|MMP7 8.284413496653238 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9203 50.081 43.0 1933300.0 25 0 202390.0 + 31266 RLWGEPVNL 9 100 542.3005394483545 1082.5865259635088 2 542.3009521365166 MULTI CID FTMS 0 0 0 9200 805846.9375 0.7170176787103955 -1 0.1542587280273437 3 Unmodified _RLWGEPVNL_ ENSG00000114374|ENST00000338981|USP9Y;ENSG00000124486|ENST00000378308|USP9X;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;nc|ENSG00000114374|O00507-2|USP9Y;nc|ENSG00000124486|Q93008-3|USP9X 57.72198328787511 0.0273433238377839 5 [R{I|L}]WGEPVN{I|L} 9 0 + 59.438 0.0 0.0 5.4904 5.4904 85.001 0.0 0.0 0.0 0.1452280640859982 34.25734570636782 0.1452280640859982 5.2827377716704405 0 1.424742501084005 0.0 0.2887254899964357 0.3252574989159953 + + [R{I|L}]WGEPVN{I|L};{[VA]|[{I|L}G]}[WR]EPVN{I|L};[R{I|L}]WGEPVGG{I|L};{[VA]|[{I|L}G]}[WR]EPVGG{I|L};{[TV]|[{I|L}S]}[RN][NG]PVN{I|L};[H{I|L}]M{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PVN{I|L};[KA][RD][NG]PVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HS]M{I|L}[RV]{I|L};[H{I|L}]M{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PVGG{I|L};[R{I|L}][NS][NG]PVN{I|L} 5.4904;5.0024;4.6398;4.1519;3.8812;3.736;3.1163;2.8863;2.8854;2.8183 +;-;-;-;-;-;-;-;-;- + 600 1 1.953 71898.5 1.0 4780 4421 9200 SUDHL4_400M_050219_1,9203 SUDHL4_400M_050219_1,9203,RLWGEPVNL True True RLWGEPVNL 50.080555 542.300952136517 19192720.0 9200.0 nc|ENSG00000124486|Q93008-3|USP9X;;ENSG00000114374|ENST00000338981|USP9Y;;ENSG00000124486|ENST00000378308|USP9X;;nc|ENSG00000114374|O00507-2|USP9Y;;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF 6.954455852508545 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9204 50.082 60.0 865080.0 25 0 62622.0 3514 CRRWRYWEYWS 11 69 845.8912356916455 1689.767918450091 2 845.8951293826103 MULTI CID FTMS 0 0 0 9200 827063.1875 1.0 0 0.0 4 Unmodified _CRRWRYWEYWS_ ENST00000299314.11_1_12:102159966-102161843:-|nuORF 1.1933415558491238 0.8695176722560516 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQNA{M(Oxidation (M))|F}YQ[{I|L}V] 14 12 + 100.32 0.0 0.0 5.9369 5.9369 61.968 0.0 0.0 0.0 8.081845230116201 7.569619513137056 7.569619513137056 0.0 0 0.0 1.3979400086720375 0.7614393726401688 3.159379381312206 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQNA{M(Oxidation (M))|F}YK[{I|L}V];[YQ]V[CS]QQNA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]QQNA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]QNA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQGGA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]QNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]Q[AG]NA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]Q[AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQGGA{M(Oxidation (M))|F}YQ[{I|L}V] 5.9369;5.9369;5.4586;5.4586;5.4013;5.4013;5.4013;5.4013;5.4013;5.4013 -;-;-;-;-;-;-;-;-;- 1302 1 1.953 42699.9 1.0 4781 4421 9200 SUDHL4_400M_050219_1,9204 SUDHL4_400M_050219_1,9204,CRRWRYWEYWS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9205 50.084 61.0 580660.0 25 0 47274.0 + -1 SFRRTRCCFCL 11 47 781.8603413844863 1561.7061298357726 2 782.3599120974541 MULTI CID FTMS 0 0 0 9200 595876.4375 0.516884360441993 1 -0.1113433837890625 5 3 Carbamidomethyl (C) _SFRRTRC(Carbamidomethyl (C))C(Carbamidomethyl (C))FC(Carbamidomethyl (C))L_ REV__ENSG00000134278|ENST00000409402|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-2|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-3|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-4|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-5|SPIRE1 3.5964929083625545 0.858179447565866 5 [KT]QY{M(Oxidation (M))|F}W[VS]{[QC]|[C(Carbamidomethyl (C))A]}C(Carbamidomethyl (C)){I|L} 12 -1 + 45.512 0.0 0.0 2.9142 2.9142 83.861 0.0 0.0 0.0 27.76470623657246 2.375525576268771 2.375525576268771 14.226208160867872 0 0.0 0.0 0.7614393726401688 0.3494850021680094 [KT]QY{M(Oxidation (M))|F}W[VS]{[QC]|[C(Carbamidomethyl (C))A]}C(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}WW{[QC]|[C(Carbamidomethyl (C))A]}C(Carbamidomethyl (C)){I|L} 2.9142;2.0033 -;- 212 + 1 1.953 31435.1 1.0 4782 4421 9200 SUDHL4_400M_050219_1,9205 SUDHL4_400M_050219_1,9205,SFRRTRCCFCL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9206 50.086 115.0 725310.0 25 0 142720.0 + 31076 RLLDGAFKL 9 66 516.8136126999827 1031.6126724667654 2 516.8138305544853 MULTI CID FTMS 0 0 0 9200 506577.34375 1.0 0 0.0 6 Unmodified _RLLDGAFKL_ ENSG00000074054|ENST00000696935|CLASP1;ENST00000491646.1_1_2:122217554-122217677:-|nuORF;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1 29.84058131909904 0.1515068451768857 5 A{M(Oxidation (M))|F}K{I|L} 4 5 38.365 0.0 0.0 3.7189 0.0 0.0 554.319627830275 0.0 554.319627830275 0.0 26.37492705584647 0.0 0.0 0 1.0941876774005248 0.0 0.0 0.0 + A{M(Oxidation (M))|F}K{I|L} 3.7189 + + 115 1 1.953 69470.9 1.0 4783 4421 9200 SUDHL4_400M_050219_1,9206 SUDHL4_400M_050219_1,9206,RLLDGAFKL False True RLLDGAFKL 50.086025 516.813830554485 5652563.0 9200.0 nc|ENSG00000074054|Q7Z460-5|CLASP1;;ENST00000491646.1_1_2:122217554-122217677:-|nuORF;;nc|ENSG00000074054|Q7Z460-4|CLASP1;;nc|ENSG00000074054|Q7Z460|CLASP1;;nc|ENSG00000074054|Q7Z460-3|CLASP1;;ENSG00000074054|ENST00000696935|CLASP1;;nc|ENSG00000074054|Q7Z460-2|CLASP1 6.436687469482422 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9207 50.09 207.0 494620.0 25 0 48920.0 + 25927 NLLPKLHIV 9 104 523.8395683258346 1045.6645837184692 2 523.8400146365166 MULTI CID FTMS 0 0 0 9200 289346.75 0.4654528856372149 -2 0.2635040283203125 7 Unmodified _NLLPKLHIV_ ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1 57.47134341890925 0.0274820932774257 5 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}HV{I|L} 9 2 + 55.919 0.0 0.0 5.3477 5.3477 79.488 0.0 0.0 0.0 13.867140640394098 0.8543019532462637 0.8543019532462637 0.8543019532462637 0 1.3494850021680094 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}HV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V;[H{I|L}][KP]{I|L}{I|L}NV{I|L};[H{I|L}]{I|L}KP{I|L}NV{I|L};{I|L}{I|L}HKP{I|L}NV{I|L};[H{I|L}][KP]{I|L}{I|L}GGV{I|L};[H{I|L}]{I|L}KP{I|L}GGV{I|L};[KP]{I|L}H{I|L}{I|L}NV{I|L};{I|L}{I|L}HKP{I|L}GGV{I|L};[KP]{I|L}H{I|L}{I|L}GGV{I|L} 5.3477;5.266;3.1644;3.1376;2.4489;2.2838;2.257;2.1685;1.5683;1.2879 -;+;-;-;-;-;-;-;-;- + 283 + 1 1.953 80446.1 1.0 4784 4421 9200 SUDHL4_400M_050219_1,9207 SUDHL4_400M_050219_1,9207,NLLPKLHIV True True NLLPKLHIV 50.089977 523.840014636517 12796708.0 9200.0 ENSG00000169504|ENST00000374379|CLIC4;;ENSG00000213719|ENST00000375784|CLIC1 7.1238053639729815 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9208 50.094 229.0 446810.0 25 0 45293.0 + 44188 YLFERIKEL 9 77 605.8450511301153 1209.6755493270305 2 605.8454467654228 MULTI CID FTMS 0 0 0 9200 264936.125 1.0 0 0.0 8 Unmodified _YLFERIKEL_ ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-2|TMEM209 44.94466952835103 0.0514539652423294 5 [Y{I|L}]{M(Oxidation (M))|F}WV{I|L}KE{I|L} 9 2 + 73.299 0.0 0.0 6.0594 6.0594 94.307 0.0 0.0 0.0 14.014093602655464 48.84189037913593 14.014093602655464 73.2986626650986 0 1.774227503252014 2.0 0.3494850021680094 0.0 [Y{I|L}]{M(Oxidation (M))|F}WV{I|L}KE{I|L} 6.0594 - 182 1 1.953 77189.9 1.0 4785 4421 9200 SUDHL4_400M_050219_1,9208 SUDHL4_400M_050219_1,9208,YLFERIKEL True True YLFERIKEL 50.094286 605.845446765423 1922564.875 9200.0 ENSG00000146842|ENST00000397622|TMEM209;;nc|ENSG00000146842|Q96SK2-2|TMEM209 5.213638464609782 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9209 50.101 376.0 161700.0 25 0 35639.0 + -1 RYMKKKKTLW 10 79 699.4088777284184 1396.8032025236366 2 699.4084350466728 MULTI CID FTMS 0 0 0 9200 195322.40625 0.2967666515394571 6 -0.6317710876464844 9 Oxidation (M) _RYM(Oxidation (M))KKKKTLW_ REV__ENST00000499247.2_1_17:48940312-48940357:-|nuORF 1.6526216038709556 0.7189921496796233 5 {I|L} 1 -1 9.7539 0.0 0.0 0.6983 0.0 0.0 1265.707527940432 0.0 1265.707527940432 0.0 4.269359821608809 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.6983 + + 27 + 1 1.953 59985.2 1.0 4786 4421 9200 SUDHL4_400M_050219_1,9209 SUDHL4_400M_050219_1,9209,RYMKKKKTLW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9210 50.105 227.0 262860.0 25 0 21153.0 19511 LFLSIPCVL 9 82 502.7975465354031 1003.5805401376062 2 502.7976562380791 MULTI CID FTMS 0 0 0 9200 156129.859375 0.2155114173498027 2 -0.1906013488769531 10 Unmodified _LFLSIPCVL_ ENSG00000166796|ENST00000541669|LDHC 18.13498045792455 0.3457906370836843 5 S{I|L}{[QN]|[E{I|L}]|[KN]} 4 6 18.94 0.0 0.0 1.8873 0.0 0.0 543.3146839826187 0.0 543.3146839826187 0.0 7.346368802282015 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 S{I|L}{[QN]|[E{I|L}]|[KN]} 1.8873 - 47 1 1.953 55320.9 1.0 4787 4421 9200 SUDHL4_400M_050219_1,9210 SUDHL4_400M_050219_1,9210,LFLSIPCVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9211 50.11 263.0 375620.0 25 0 56608.0 + 40009 VGEKFLLEYI 10 101 404.22890843908704 0 404.2317077517509 PEAK CID FTMS 0 0 0 9200 164192.5 1.0 0 0.0 11 Unmodified _VGEKFLLEYI_ REV__chr6:34425221-34425583|48|67.1|0.0|22.68|-|ENST00000494077|RPS10-NUDT3,RPS10;REV__ENSG00000124614|ENST00000648437|RPS10 14.95716135407024 0.337208907547211 5 {I|L} 1 -1 6.9897 0.0 0.0 0.86673 0.0 0.0 558.2900637270038 132.04598413638908 690.3360478633929 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.86673 + + 26 + 1 1.953 80754.5 1.0 4788 4421 9200 SUDHL4_400M_050219_1,9211 SUDHL4_400M_050219_1,9211,VGEKFLLEYI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9212 50.124 800.0 89381.0 25 0 19965.0 + 19457 LFERPKRLVWA 11 81 707.9219535111006 1413.829354089001 2 707.9222289919853 MULTI CID FTMS 0 0 0 9200 96849.8984375 0.2374195724267581 6 -0.6317710876464844 12 Unmodified _LFERPKRLVWA_ REV__ENSG00000138246|ENST00000260818|DNAJC13;REV__ENST00000463038.1_1_3:132241830-132242644:+|nuORF 1.4819007175156935 0.86815623132643 5 {I|L} 1 -1 9.7539 0.0 0.0 0.68989 0.0 0.0 1282.7342593397807 0.0 1282.7342593397807 0.0 2.764209843288903 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.68989 + + 33 + 1 1.953 62993.7 0.5699999928474426 4789 4421 9200 SUDHL4_400M_050219_1,9212 SUDHL4_400M_050219_1,9212,LFERPKRLVWA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9213 50.134 541.0 131240.0 25 0 6582.8 -1 0 96 972.9692273836794 1943.9239018341584 2 972.9705688357352 MULTI CID FTMS 0 0 0 9200 105351.609375 1.0 0 0.0 13 5 [{I|L}V]NS{[TV]|[{I|L}S]}SA{[WS]|[C(Carbamidomethyl (C)){I|L}]}AENQ 14 -1 52.674 0.0 0.0 2.7096 0.0 0.0 0.0 454.1777602807581 454.1777602807581 30.76229158546596 0.0 0.0 0.0 0 0.3054621874040891 0.9208187539523752 0.0 0.4247425010840047 [{I|L}V]NS{[TV]|[{I|L}S]}SA{[WS]|[C(Carbamidomethyl (C)){I|L}]}AENQ 2.7096 - 2336 1 1.953 54567.9 1.0 4790 4421 9200 SUDHL4_400M_050219_1,9213 SUDHL4_400M_050219_1,9213, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9214 50.139 285.0 174820.0 25 0 19957.0 + + -1 GLMERYLSV 9 85 533.7848600001766 1065.5551670671532 2 534.2841674685478 MULTI CID FTMS 0 0 0 9200 92000.1328125 1.0 0 0.0 14 Carbamidomethyl (C) _AVLFTEKC(Carbamidomethyl (C))V_ nc|ENSG00000106948|Q7Z591-7|AKNA;nc|ENSG00000106948|Q7Z591-2|AKNA;ENSG00000106948|ENST00000374088|AKNA;nc|ENSG00000106948|Q7Z591-8|AKNA;nc|ENSG00000106948|Q7Z591-3|AKNA;nc|ENSG00000106948|Q7Z591-5|AKNA 7.910154910731844 0.6385446671287552 5 SV 2 -1 13.979 0.0 0.0 1.3119 0.0 0.0 861.4435623081673 0.0 861.4435623081673 0.0 1.928031367991565 0.0 0.0 0 0.0 0.0 0.0 0.0 SV 1.3119 - 83 + 1 1.953 43192.3 1.0 4791 4421 9200 SUDHL4_400M_050219_1,9214 SUDHL4_400M_050219_1,9214,AVLFTEKCV False False GLMERYLSV 50.138806 534.284167468548 167210.640625 9200.0 nc|ENSG00000106948|Q7Z591-7|AKNA;;nc|ENSG00000106948|Q7Z591-2|AKNA;;ENSG00000106948|ENST00000374088|AKNA;;nc|ENSG00000106948|Q7Z591-8|AKNA;;nc|ENSG00000106948|Q7Z591-3|AKNA;;nc|ENSG00000106948|Q7Z591-5|AKNA 6.771427631378174 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9215 50.147 460.0 184310.0 25 0 14996.0 28665 PVNRTLSL 8 126 450.2696037323426 0 450.2701599001884 PEAK CID FTMS 0 0 0 9200 88566.1640625 1.0 0 0.0 15 Unmodified _PVNRTLSL_ ENST00000609322.1_1_22:37768170-37768335:+|nuORF 5.230669730166228 0.5807325378471833 5 Q 1 8 0.71334 0.0 0.0 0.07939 0.0 0.0 484.3694859297258 283.0828557338996 767.4523416636255 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.07939 - 1 + 1 1.953 69177.0 1.0 4792 4421 9200 SUDHL4_400M_050219_1,9215 SUDHL4_400M_050219_1,9215,PVNRTLSL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9216 50.153 284.0 366620.0 25 0 33879.0 + 31270 RLWNETVEL 9 99 580.3085764692927 1158.6026000053853 2 580.3080322146416 MULTI CID FTMS 0 0 0 9200 88349.7109375 0.2401352234474398 -1 0.1542587280273437 16 Unmodified _RLWNETVEL_ ENSG00000035499|ENST00000265036|DEPDC1B;nc|ENSG00000035499|Q8WUY9-2|DEPDC1B 51.629811660486645 0.0367964933207742 5 [R{I|L}]WNETVE{I|L} 9 0 + 67.427 0.0 0.0 5.8196 5.8196 83.399 0.0 0.0 0.0 3.65279269351241 50.14645333192 3.65279269351241 3.0102999566398125 0 0.8494850021680094 0.0 0.805462187404089 0.3252574989159953 + + [R{I|L}]WNETVE{I|L};[R{I|L}]WNTEVE{I|L};[R{I|L}]WGGETVE{I|L};{[QN]|[E{I|L}]|[KN]}M[VP]ETVE{I|L};[R{I|L}]WGGTEVE{I|L};{[QN]|[E{I|L}]|[KN]}M[VP]TEVE{I|L};[R{I|L}]WN[DP]V{M(Oxidation (M))|F}{I|L};[VP]{[ET]|[MV]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EVE{I|L};[R{I|L}]WNTTQQ{I|L};[R{I|L}]WNEK[NS]{I|L} 5.8196;5.5598;5.0249;5.0114;4.7651;4.7516;3.1003;2.8659;2.8439;2.84 +;-;-;-;-;-;-;-;-;- + 431 1 1.953 86413.5 1.0 4793 4421 9200 SUDHL4_400M_050219_1,9216 SUDHL4_400M_050219_1,9216,RLWNETVEL True True RLWNETVEL 50.153354 580.308032214642 2426734.25 9200.0 nc|ENSG00000035499|Q8WUY9-2|DEPDC1B;;ENSG00000035499|ENST00000265036|DEPDC1B 6.586208820343018 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9217 50.167 800.0 70856.0 25 0 2909.2 -1 0 78 1174.8820238586163 3521.624242176049 3 1175.551928699017 MULTI CID FTMS 0 0 0 9200 173491.75 1.0 0 0.0 17 5 VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 14 -1 70.2 0.0 0.0 1.9934 0.0 0.0 1891.905527876308 0.0 1891.905527876308 0.0 63.2107918022669 0.0 0.0 0 0.0 0.0 0.0 1.1307196863200843 VQY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.9934 - 696 + 1 1.953 39592.7 0.5699999928474426 4794 4421 9200 SUDHL4_400M_050219_1,9217 SUDHL4_400M_050219_1,9217, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9218 50.172 261.0 329940.0 25 0 71406.0 + 22679 LQAARKRWPR 10 68 641.3849989839694 0 641.3849975466728 PEAK CID FTMS 0 0 0 9200 172401.8125 0.5389137594661559 -2 0.2635040283203125 18 Unmodified _LQAARKRWPR_ REV__nc|ENSG00000182366|P0C7U9|FAM87A 1.4819007175156935 0.3961065659209837 5 A 1 -1 2.2185 0.0 0.0 0.17322 0.0 0.0 757.4793963060262 449.2144259088501 1206.6938222148765 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.17322 + + 5 + 1 1.953 72329.8 1.0 4795 4421 9200 SUDHL4_400M_050219_1,9218 SUDHL4_400M_050219_1,9218,LQAARKRWPR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9219 50.178 323.0 181720.0 25 0 26661.0 + 24124 LYNRQTRIHKL 11 94 481.28348418622863 1440.828623158886 3 481.2832824587822 MULTI CID FTMS 0 0 0 9200 168335.1875 0.7050681098763247 -2 0.2635040283203125 19 Unmodified _LYNRQTRIHKL_ REV__ENSG00000144724|ENST00000474889|PTPRG;REV__ENST00000475012.5_1_3:62203523-62278979:+|nuORF;REV__nc|ENSG00000144724|P23470-2|PTPRG 3.5964929083625545 0.858179447565866 5 {I|L}W 2 -1 14.693 0.0 0.0 1.0197 0.0 0.0 1123.654045377439 0.0 1123.654045377439 0.0 1.928527761275128 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}W 1.0197 - 45 + 1 1.953 57755.1 1.0 4796 4421 9200 SUDHL4_400M_050219_1,9219 SUDHL4_400M_050219_1,9219,LYNRQTRIHKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9220 50.185 377.0 106580.0 25 0 29065.0 9647 FLNRRRRRER 10 61 729.9350846384726 1457.8556163437452 2 729.9344970583916 MULTI CID FTMS 0 0 0 9200 124883.6171875 0.5386547406096758 -4 0.3301734924316406 20 Unmodified _FLNRRRRRER_ ENSG00000150637|ENST00000582621|CD226 0.4007161486938917 0.7247829448918255 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.953 41334.9 1.0 4797 4421 9200 SUDHL4_400M_050219_1,9220 SUDHL4_400M_050219_1,9220,FLNRRRRRER False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9222 50.19 45.0 894380.0 25 0 158230.0 34310 SLRQLRHLP 9 66 560.340182616347 1118.6658122994938 2 560.3405029177666 MULTI CID FTMS 0 0 0 9221 933533.875 0.5623566769149214 1 -0.0792579650878906 1 Unmodified _SLRQLRHLP_ ENSG00000248487|ENST00000273596|ABHD14A 1.844237919475145 0.850302753031785 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.95 35645.5 1.0 4798 4422 9221 SUDHL4_400M_050219_1,9222 SUDHL4_400M_050219_1,9222,SLRQLRHLP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9223 50.191 47.0 1105600.0 25 0 197910.0 -1 KMRKLFKGI 9 70 568.8534480120255 1135.692343090851 2 568.8536865115166 MULTI CID FTMS 0 0 0 9221 667061.0 0.6001359404021442 1 -0.0792579650878906 2 Oxidation (M) _KM(Oxidation (M))RKLFKGI_ ENST00000559305.5_1_15:59191033-59209159:-|nuORF 2.059750862983233 0.8427793054688888 5 N 1 -1 6.9897 0.0 0.0 0.61546 0.0 0.0 274.2588841887621 744.3706759088499 1018.629560097612 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.61546 - 7 + 1 1.95 45245.5 1.0 4799 4422 9221 SUDHL4_400M_050219_1,9223 SUDHL4_400M_050219_1,9223,KMRKLFKGI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9224 50.194 116.0 412330.0 25 0 59106.0 + 9308 FIFSDTHEL 9 67 554.7687584990427 1107.5229640648854 2 554.7690917849541 MULTI CID FTMS 0 0 0 9221 307325.59375 0.3260458634221103 2 -0.169189453125 3 Unmodified _FIFSDTHEL_ ENSG00000102699|ENST00000381989|PARP4 25.399314129420983 0.2080152500878129 5 TDS{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 6 6 29.13 0.0 0.0 2.6302 0.0 0.0 397.1964588849625 0.0 397.1964588849625 0.0 5.632435487673529 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 TDS{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 2.6302 - 263 1 1.95 43737.4 1.0 4800 4422 9221 SUDHL4_400M_050219_1,9224 SUDHL4_400M_050219_1,9224,FIFSDTHEL False True FIFSDTHEL 50.193539 554.769091784954 12666685.0 9221.0 ENSG00000102699|ENST00000381989|PARP4 5.922869682312012 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9225 50.196 138.0 404950.0 25 0 51516.0 + 18315 KVLDLKINL 9 86 528.3447395429922 1054.6749261527843 2 528.3455078005791 MULTI CID FTMS 0 0 0 9221 233077.125 0.4937676503576446 -1 0.1113433837890625 4 Unmodified _KVLDLKINL_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 51.487983226225225 0.0371074584807926 5 KV{I|L}D{I|L}{I|L}KN{I|L} 9 2 + 56.689 0.0 0.0 5.375 5.375 89.933 0.0 0.0 0.0 7.865364186615608 12.930599746173217 7.865364186615608 12.460762528683702 0 1.2931576817365436 0.0 0.0 1.674742501084005 KV{I|L}D{I|L}{I|L}KN{I|L};KV{I|L}D{I|L}{I|L}KGG{I|L};{I|L}[WR]{I|L}[RK]A{I|L} 5.375;4.1935;3.5704 -;-;- 949 + 1 1.95 46779.3 1.0 4801 4422 9221 SUDHL4_400M_050219_1,9225 SUDHL4_400M_050219_1,9225,KVLDLKINL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9226 50.2 201.0 185500.0 25 0 58131.0 + 17735 KPVVPETLRLF 11 55 649.8980612238543 1297.7815695145084 2 649.8981811404228 MULTI CID FTMS 0 0 0 9221 219572.546875 1.0 0 0.0 5 Unmodified _KPVVPETLRLF_ REV__ENSG00000134575|ENST00000672073|ACP2 1.1933415558491238 0.8695176722560516 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.95 44405.5 1.0 4802 4422 9221 SUDHL4_400M_050219_1,9226 SUDHL4_400M_050219_1,9226,KPVVPETLRLF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9227 50.205 285.0 258080.0 25 0 33143.0 + 37492 TLFPKDVQL 9 100 530.8055927700558 1059.5966326069115 2 530.8058349490166 MULTI CID FTMS 0 0 0 9221 188447.09375 1.0 0 0.0 6 Unmodified _TLFPKDVQL_ ENSG00000115163|ENST00000335756|CENPA;ENST00000419525.5_1_2:27015485-27016144:+|nuORF;ENST00000472719.5_1_2:27008929-27016144:+|nuORF;ENST00000475662.5_1_2:26987167-27016144:+|nuORF;nc|ENSG00000115163|P49450-2|CENPA 38.17557092003332 0.0854718145212029 5 [{I|L}T]{M(Oxidation (M))|F}P[WR]Q{I|L} 8 3 + 58.707 0.0 0.0 5.5405 5.5405 90.505 0.0 0.0 0.0 25.48886153915462 14.23061874357608 14.23061874357608 12.75698788007091 0 1.305462187404089 2.0 0.0 1.1549471895720984 [{I|L}T]{M(Oxidation (M))|F}P[WR]Q{I|L};[{I|L}T]{M(Oxidation (M))|F}P[WR][AG]{I|L};[{I|L}T]{M(Oxidation (M))|F}PAG[{I|L}T]Q{I|L};[{I|L}T]{M(Oxidation (M))|F}PQ[{I|L}T]Q{I|L};[{I|L}T]QP{M(Oxidation (M))|F}[{I|L}T]Q{I|L};[{I|L}T]{M(Oxidation (M))|F}{[WT]|[RM]}[KP][PA];[{I|L}T]{[WS]|[C(Carbamidomethyl (C)){I|L}]}V[{I|L}T]Q{I|L};[{I|L}V][QA]{[WT]|[RM]}{M(Oxidation (M))|F}[VP];{[QV]|[N{I|L}]|[RA]|[KV]}[R{M(Oxidation (M))|F}]AP{M(Oxidation (M))|F}[VP];[KP]DV{M(Oxidation (M))|F}[{I|L}T]Q{I|L} 5.5405;4.3365;4.3109;3.9785;3.5295;2.7494;2.6405;2.6315;2.2793;1.9586 -;-;-;-;-;-;-;-;-;- 1031 + 1 1.95 59424.1 1.0 4803 4422 9221 SUDHL4_400M_050219_1,9227 SUDHL4_400M_050219_1,9227,TLFPKDVQL True True TLFPKDVQL 50.205427 530.805834949017 1436916.5 9221.0 chr2:26792833-26793206|17|10.29|0.09|6.77|+|2|CENPA,None|1;;ENST00000419525.5_1_2:27015485-27016144:+|nuORF;;ENST00000472719.5_1_2:27008929-27016144:+|nuORF;;ENSG00000115163|ENST00000335756|CENPA;;nc|ENSG00000115163|P49450-2|CENPA;;ENST00000475662.5_1_2:26987167-27016144:+|nuORF 6.632818380991618 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9228 50.208 153.0 431570.0 25 0 43653.0 + 40531 VIWGTDVNV 9 105 501.76626768890816 1001.5179824446165 2 501.7669250369072 MULTI CID FTMS 0 0 0 9221 186687.625 0.1149935912385952 -3 0.374847412109375 7 Unmodified _VIWGTDVNV_ ENSG00000104738|ENST00000649973|MCM4 32.116972079565 0.1225432171549407 5 WWW{I|L} 4 8 28.416 0.0 0.0 2.8373 0.0 0.0 0.0 327.16529624760386 327.16529624760386 3.979400086720375 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 WWW{I|L} 2.8373 - 312 1 1.95 53953.5 1.0 4804 4422 9221 SUDHL4_400M_050219_1,9228 SUDHL4_400M_050219_1,9228,VIWGTDVNV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9229 50.214 273.0 207050.0 25 0 27935.0 + 23916 LVNLLSLHYPL 11 68 427.9256571167367 0 427.9257690310478 PEAK CID FTMS 0 0 0 9221 155142.578125 1.0 0 0.0 8 Unmodified _LVNLLSLHYPL_ REV__nc|ENSG00000089472|Q9BQS7-3|HEPH 1.3295316138638542 0.4761840153648598 5 E 1 -1 0.3786 0.0 0.0 0.044341 0.0 0.0 625.6886117414828 96.0825213067992 721.771133048282 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.044341 - 3 + 1 1.95 55155.3 1.0 4805 4422 9221 SUDHL4_400M_050219_1,9229 SUDHL4_400M_050219_1,9229,LVNLLSLHYPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9230 50.218 269.0 215880.0 25 0 23658.0 + 25887 NLINEINGV 9 105 493.2682247123035 984.521896491407 2 493.2682983279228 MULTI CID FTMS 0 0 0 9221 157154.28125 1.0 0 0.0 9 Unmodified _NLINEINGV_ ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-2|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;nc|ENSG00000075151|O43432|EIF4G3 21.74664581756881 0.2544899275067181 5 {[QV]|[N{I|L}]|[RA]|[KV]}EC 4 6 28.416 0.0 0.0 2.8863 0.0 0.0 0.0 522.3246668373632 522.3246668373632 11.720449851406514 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}EC 2.8863 - 201 1 1.95 48607.0 1.0 4806 4422 9221 SUDHL4_400M_050219_1,9230 SUDHL4_400M_050219_1,9230,NLINEINGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9231 50.222 208.0 121840.0 25 0 35325.0 43383 WQIRTVKLIRY 11 45 738.4485462460558 1474.8825395589115 2 738.4492065310478 MULTI CID FTMS 0 0 0 9221 107331.3984375 0.6164508750571427 -3 0.374847412109375 10 Unmodified _WQIRTVKLIRY_ ENSG00000107593|ENST00000318222|PKD2L1;nc|ENSG00000107593|Q9P0L9-2|PKD2L1;nc|ENSG00000107593|Q9P0L9-3|PKD2L1;nc|ENSG00000107593|Q9P0L9-5|PKD2L1 0.3506318815782774 0.8734936314171269 5 K 1 10 4.6041 0.0 0.0 0.31217 0.0 0.0 1060.6363370216052 283.1189364068969 1343.755273428502 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.31217 + + 2 + 1 1.95 29505.9 1.0 4807 4422 9221 SUDHL4_400M_050219_1,9231 SUDHL4_400M_050219_1,9231,WQIRTVKLIRY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9232 50.236 800.0 145950.0 25 0 17675.0 + 16957 KIPDWFLNR 9 110 594.830098665678 1187.6456443981558 2 594.8301269412041 MULTI CID FTMS 0 0 0 9221 88118.25 1.0 0 0.0 11 Unmodified _KIPDWFLNR_ ENSG00000231500|ENST00000439602|RPS18;ENST00000445477.1_1_22:31955550-31955922:+|nuORF;ENST00000474626.5_1_6:33239896-33243984:+|nuORF;ENST00000496813.5_1_6:33239896-33244045:+|nuORF 18.721224879955976 0.3299216912490967 5 K{I|L}PDW{M(Oxidation (M))|F}[RN]{I|L} 9 2 + 52.344 0.0 0.0 4.4074 4.4074 77.226 0.0 0.0 0.0 22.86089645871044 1.4132915279646951 1.4132915279646951 1.4132915279646951 0 1.0 0.638272163982407 0.0 0.4247425010840047 K{I|L}PDW{M(Oxidation (M))|F}[RN]{I|L};K{I|L}PDW{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}R;K{I|L}PD{[DA]|[EG]}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}R 4.4074;4.2884;3.513 -;+;- + 95 + 1 1.95 92278.1 0.550000011920929 4808 4422 9221 SUDHL4_400M_050219_1,9232 SUDHL4_400M_050219_1,9232,KIPDWFLNR False True KIPDWFLNR 50.23627 594.830126941204 799134.25 9221.0 ENST00000474626.5_1_6:33239896-33243984:+|nuORF;;ENST00000445477.1_1_22:31955550-31955922:+|nuORF;;ENST00000496813.5_1_6:33239896-33244045:+|nuORF;;ENSG00000231500|ENST00000439602|RPS18;;chr6:33272122-33275992|14|41.43|0.9|5.53|+|0|RPS18,None|1 7.09489901860555 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9233 50.25 800.0 76193.0 25 0 4602.9 -1 0 99 890.4572064653839 2668.349789996352 3 890.7906371951103 MULTI CID FTMS 0 0 0 9221 131320.34375 0.961952716049298 -1 0.1113433837890625 12 5 [{I|L}P]SVQ{I|L}ET 8 -1 53.906 0.0 0.0 2.0202 0.0 0.0 0.0 1797.8633757719956 1797.8633757719956 27.571545273476392 0.0 0.0 0.0 0 0.0 2.0 0.8807196863200843 0.0 [{I|L}P]SVQ{I|L}ET 2.0202 - 1009 1 1.95 48154.1 0.699999988079071 4809 4422 9221 SUDHL4_400M_050219_1,9233 SUDHL4_400M_050219_1,9233, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9234 50.264 800.0 73871.0 25 0 8960.5 + -1 CRQLRRVRRQ 10 96 714.4131258735579 1426.8116988139157 2 714.4128906130791 MULTI CID FTMS 0 0 0 9221 112936.890625 1.0 0 0.0 13 Carbamidomethyl (C) _C(Carbamidomethyl (C))RQLRRVRRQ_ REV__ENSG00000161277|ENST00000292894|THAP8;REV__ENST00000522483.2_1_19:36526344-36545129:-|nuORF 6.2057823575117 0.6979311171683138 5 {I|L} 1 -1 11.42 0.0 0.0 0.80038 0.0 0.0 1295.7166956174297 0.0 1295.7166956174297 0.0 6.815889512064128 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80038 + + 52 + 1 1.95 50589.6 0.6399999856948853 4810 4422 9221 SUDHL4_400M_050219_1,9234 SUDHL4_400M_050219_1,9234,CRQLRRVRRQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9236 50.27 209.0 225630.0 25 0 21682.0 + 33744 SLAGDVALQQL 11 84 557.8084520604791 1113.602351187758 2 557.8089477419853 MULTI CID FTMS 0 0 0 9235 286092.65625 0.2315928162289937 2 -0.1853599548339843 1 Unmodified _SLAGDVALQQL_ ENSG00000010292|ENST00000315579|NCAPD2 47.74868867922204 0.1300977870992118 5 {[TV]|[{I|L}S]}NEVA 6 7 43.121 0.0 0.0 3.8722 0.0 0.0 0.0 497.2721869634019 497.2721869634019 12.442190502882156 0.0 0.0 0.0 0 0.0 2.0 1.424742501084005 0.0 {[TV]|[{I|L}S]}NEVA 3.8722 - 761 1 1.95 41510.7 1.0 4811 4423 9235 SUDHL4_400M_050219_1,9236 SUDHL4_400M_050219_1,9236,SLAGDVALQQL False True SLAGDVALQQL 50.270466 557.808947741985 26676972.0 9235.0 ENSG00000010292|ENST00000315579|NCAPD2 6.056557337443034 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9237 50.284 800.0 156370.0 25 0 27147.0 + 19923 LIARQRQLR 9 121 577.3669220007798 1152.7192910683596 2 577.3668701052666 MULTI CID FTMS 0 0 0 9235 120045.6953125 0.3786854296305555 2 -0.1853599548339843 2 Unmodified _LIARQRQLR_ REV__ENSG00000148303|ENST00000323345|RPL7A;REV__ENST00000463740.5_1_9:136215098-136217195:+|nuORF 2.059750862983233 0.8427793054688888 5 {I|L} 1 -1 9.2694 0.0 0.0 0.80413 0.0 0.0 1021.6241810603502 0.0 1021.6241810603502 0.0 0.6401490679272079 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.80413 + + 32 + 1 1.95 99691.8 0.7699999809265137 4812 4423 9235 SUDHL4_400M_050219_1,9237 SUDHL4_400M_050219_1,9237,LIARQRQLR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9238 50.286 73.0 880340.0 25 0 193280.0 + 33941 SLHDAIMIV 9 66 499.77032892692375 997.5261049206476 2 499.7707397341728 MULTI CID FTMS 0 0 0 9235 829455.1875 0.3688261224375455 -2 0.1906013488769531 3 Unmodified _SLHDAIMIV_ ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 36.04419817259434 0.0971720506436186 5 [HD]A{I|L}S{I|L}M{I|L}V 9 4 + 50.512 0.0 0.0 5.0637 5.0637 85.379 0.0 0.0 0.0 4.762036441594191 33.773043837969325 4.762036441594191 8.26606256887672 0 0.8182503180159344 0.0 1.1237125054200234 0.0 [HD]A{I|L}S{I|L}M{I|L}V;[HD]A{I|L}SM{I|L}{I|L}V;[HD]{[TV]|[{I|L}S]}A{I|L}M{I|L}V;[HD]A{I|L}MS{I|L}{I|L}V;[HD]{[TV]|[{I|L}S]}AM{I|L}{I|L}V;[YR]{[DA]|[EG]}[YV]{I|L}V 5.0637;4.2351;4.0894;3.2812;3.2607;0.43249 -;-;-;-;-;- 154 1 1.95 54881.0 1.0 4813 4423 9235 SUDHL4_400M_050219_1,9238 SUDHL4_400M_050219_1,9238,SLHDAIMIV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9239 50.29 231.0 502960.0 25 0 51346.0 + 40994 VMAPRTLLL 9 93 507.31237334472144 1012.6101937562428 2 507.3124572634697 MULTI CID FTMS 0 0 0 9235 312941.78125 0.0583550966390068 -2 0.1906013488769531 4 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 47.594388314883695 0.0456443387682827 5 VMAP 4 5 57.691 0.0 0.0 5.6972 0.0 0.0 0.0 611.3867281549436 611.3867281549436 24.94341577071616 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMAP 5.6972 + + 86 + 1 1.95 92775.0 1.0 4814 4423 9235 SUDHL4_400M_050219_1,9239 SUDHL4_400M_050219_1,9239,VMAPRTLLL True True VMAPRTLLL 50.290318 507.31245726347 119301492.0 9235.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 3.62167235215505 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9240 50.295 262.0 576690.0 25 0 37932.0 -1 0 105 887.4125322760457 1772.8105116188913 2 887.4133788943291 MULTI CID FTMS 0 0 0 9235 302493.84375 0.3698797927347099 -2 0.1906013488769531 5 5 {[QV]|[N{I|L}]|[RA]|[KV]}[DC]{M(Oxidation (M))|F}AAGQNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 125.19 0.0 0.0 7.0617 7.0617 83.699 0.0 0.0 0.0 3.463911612001638 86.08613757761817 3.463911612001638 0.6888128940781257 0 1.1382104921644451 1.5228787452803376 1.0044321917401078 2.004432191740108 {[QV]|[N{I|L}]|[RA]|[KV]}[DC]{M(Oxidation (M))|F}AAGQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[DC]{M(Oxidation (M))|F}AQQNA{M(Oxidation (M))|F}YQV{I|L};{[MS]|[{M(Oxidation (M))|F}A]}NMEAAGQNA{M(Oxidation (M))|F}YQV{I|L};{[MS]|[{M(Oxidation (M))|F}A]}NMEAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][WD]AAGQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][WD]AQQNA{M(Oxidation (M))|F}YQV{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}MEAAGQNA{M(Oxidation (M))|F}YQV{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[DC]{M(Oxidation (M))|F}AAGQNA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[DC]{M(Oxidation (M))|F}AAGQGGA{M(Oxidation (M))|F}YQV{I|L} 7.0617;7.0228;6.8566;6.8178;6.775;6.7373;6.7132;6.6743;6.5532;6.5532 -;-;-;-;-;-;-;-;-;- 5466 1 1.95 107499.4 1.0 4815 4423 9235 SUDHL4_400M_050219_1,9240 SUDHL4_400M_050219_1,9240, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9241 50.299 214.0 581080.0 25 0 60044.0 + 40621 VLDDKDYFL 9 130 564.2844382535743 1126.5543235739483 2 564.2851440310478 MULTI CID FTMS 0 0 0 9235 297026.71875 0.57671556536887 -1 0.0792579650878906 6 Unmodified _VLDDKDYFL_ ENSG00000115541|ENST00000233893|HSPE1;ENST00000465573.1_1_2:198365552-198367980:+|nuORF;ENST00000550617.1_1_12:102267096-102267252:-|nuORF 55.50274090549119 0.0285720310785888 5 V{I|L}DNV{I|L}DDQP 10 6 + 91.111 0.0 0.0 8.0876 8.0876 93.418 0.0 0.0 0.0 39.041007479514406 7.695510786217255 7.695510786217255 9.164539485499247 0 0.75 2.0 1.885151878060192 0.0 V{I|L}DNV{I|L}DDQP;V{I|L}DGGV{I|L}DDQP;V{I|L}DNV{I|L}DD[AG]P;V{I|L}DNVD{I|L}DQP;V{I|L}DGGV{I|L}DD[AG]P;V{I|L}DNVD{I|L}D[AG]P;V{I|L}DGGVD{I|L}DQP;V{I|L}DNV[YE]Y{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DD{I|L}VY{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DDY{I|L}V{M(Oxidation (M))|F}{I|L} 8.0876;7.2741;7.2741;7.0198;6.4638;6.2063;6.2063;6.1564;6.0708;6.0129 -;-;-;-;-;-;-;-;-;- 2968 + 1 1.95 101337.5 1.0 4816 4423 9235 SUDHL4_400M_050219_1,9241 SUDHL4_400M_050219_1,9241,VLDDKDYFL True True VLDDKDYFL 50.299257 564.285144031048 3690619.25 9235.0 ENSG00000115541|ENST00000233893|HSPE1;;ENST00000465573.1_1_2:198365552-198367980:+|nuORF;;ENST00000550617.1_1_12:102267096-102267252:-|nuORF 0.2159211039543151 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9242 50.313 800.0 302180.0 25 0 28630.0 -1 YIIMQSCWAF 10 138 659.7988466622734 1317.583140391347 2 659.7999145388603 MULTI CID FTMS 0 0 0 9235 138281.0625 0.5051187721339351 -1 0.0792579650878906 7 Carbamidomethyl (C) _YIIMQSC(Carbamidomethyl (C))WAF_ ENSG00000122025|ENST00000241453|FLT3;ENST00000380987.2_1_13:28578191-28599431:-|nuORF;nc|ENSG00000122025|P36888-2|FLT3 22.736283301280096 0.4578556481593033 5 Y{I|L}{M(Oxidation (M))|F}D 4 -1 54.909 0.0 0.0 4.1674 0.0 0.0 0.0 776.3197233668991 776.3197233668991 31.729713479345595 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 Y{I|L}{M(Oxidation (M))|F}D 4.1674 - 1066 + 1 1.95 178899.5 0.5799999833106995 4817 4423 9235 SUDHL4_400M_050219_1,9242 SUDHL4_400M_050219_1,9242,YIIMQSCWAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9243 50.327 800.0 128390.0 25 0 14800.0 + 38077 TPIFIRTFLEA 11 134 654.3741819941383 1306.7338110550766 2 654.3742553591728 MULTI CID FTMS 0 0 0 9235 130923.625 0.6718213170007328 2 -0.1853599548339843 8 Unmodified _TPIFIRTFLEA_ REV__ENSG00000154864|ENST00000674853|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5-2|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5-4|PIEZO2;REV__nc|ENSG00000154864|Q9H5I5|PIEZO2 5.296884461304476 0.8501568894076437 5 {I|L} 1 -1 11.109 0.0 0.0 0.85015 0.0 0.0 1175.6387163058562 0.0 1175.6387163058562 0.0 8.010299956639813 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.85015 + + 211 + 1 1.95 89709.3 0.5600000023841858 4818 4423 9235 SUDHL4_400M_050219_1,9243 SUDHL4_400M_050219_1,9243,TPIFIRTFLEA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9244 50.341 800.0 245960.0 25 0 30398.0 -1 0 114 930.4474170386204 1858.880281144041 2 930.450732409954 MULTI CID FTMS 0 0 0 9235 125338.6796875 0.8109287430470056 -1 0.0792579650878906 9 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[KQ]CQQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 122.39 0.0 0.0 6.5843 6.5843 63.684 0.0 0.0 0.0 4.585373574546168 94.93623790491816 4.585373574546168 0.0 0 1.4604093769761874 1.3979400086720375 0.0 1.8226825097560424 {[QV]|[N{I|L}]|[RA]|[KV]}Y[KQ]CQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[KQ]CQQNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}[DP]QQNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}[DP]QQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[KQ]CQQGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[KQ]C[AG]QNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}[HM]AENA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[KQ]CQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[KQ]CQQGGA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}[HM]AENA{M(Oxidation (M))|F}YKV{I|L} 6.5843;6.5843;6.2604;6.2604;6.0984;6.0984;6.0984;6.0984;6.0984;6.0984 -;-;-;-;-;-;-;-;-;- 7268 1 1.95 132998.9 0.5799999833106995 4819 4423 9235 SUDHL4_400M_050219_1,9244 SUDHL4_400M_050219_1,9244, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9245 50.354 670.0 141300.0 25 0 9785.5 -1 0 84 951.4598645733352 1900.9051762134704 2 951.962939441204 MULTI CID FTMS 0 0 0 9235 109882.0390625 0.8362768821951385 -1 0.0792579650878906 10 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 98.974 0.0 0.0 5.2067 5.2067 86.321 0.0 0.0 0.0 10.05262097903892 77.80307555600956 10.05262097903892 9.013902021140495 0 0.8935078169319297 1.5228787452803376 0.3252574989159953 1.579689690656103 {[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EA[AG]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQGGA{M(Oxidation (M))|F}YQV{I|L};[YQ][KG]DEAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[NS]EAQQNA{M(Oxidation (M))|F}YQV{I|L};[KA][YN]DEAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][KG]DEA[AG]QNA{M(Oxidation (M))|F}YQV{I|L};[YQ][KG]DEAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L} 5.2067;4.7325;4.7325;4.7325;4.7325;4.6565;4.5639;4.4055;4.1824;4.1824 -;-;-;-;-;-;-;-;-;- 2328 1 1.95 65595.3 1.0 4820 4423 9235 SUDHL4_400M_050219_1,9245 SUDHL4_400M_050219_1,9245, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9247 50.359 13.0 3612100.0 25 0 182710.0 -1 0 67 881.4114268818424 1760.8083008304848 2 881.4141723513603 MULTI CID FTMS 0 0 0 9246 2617173.0 0.1389297162963499 3 -0.3512382507324219 1 5 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 12 -1 65.883 0.0 0.0 3.7417 0.0 0.0 358.2264217777559 0.0 358.2264217777559 0.0 51.93102239436314 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.8494850021680094 Y{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 3.7417 - 1650 + 1 1.955 42218.2 1.0 4821 4424 9246 SUDHL4_400M_050219_1,9247 SUDHL4_400M_050219_1,9247, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9248 50.36 66.0 499160.0 25 0 40310.0 + -1 SFRRTRCCFCL 11 52 781.8603413844863 1561.7061298357726 2 781.8658325076103 MULTI CID FTMS 0 0 0 9246 523882.15625 0.5729199503284779 1 -0.095428466796875 2 3 Carbamidomethyl (C) _SFRRTRC(Carbamidomethyl (C))C(Carbamidomethyl (C))FC(Carbamidomethyl (C))L_ REV__ENSG00000134278|ENST00000409402|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-2|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-3|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-4|SPIRE1;REV__nc|ENSG00000134278|Q08AE8-5|SPIRE1 3.5964929083625545 0.858179447565866 5 [KT]EY{M(Oxidation (M))|F}ANQ[CS]C(Carbamidomethyl (C))V{I|L} 13 -1 + 61.261 0.0 0.0 3.9227 3.9227 79.118 0.0 0.0 0.0 4.050244867691433 9.279032320494808 4.050244867691433 4.050244867691433 0 0.5 0.0 0.0 0.4247425010840047 [KT]EY{M(Oxidation (M))|F}ANQ[CS]C(Carbamidomethyl (C))V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQ[{I|L}V];[KT]EY{M(Oxidation (M))|F}ANQ[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AGGQ[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AN[AG][CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[CS][CG]V{I|L};[YQ]V[CS]QNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QGGA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}Y[AG][{I|L}V] 3.9227;3.6633;3.6025;3.3418;3.3418;3.3418;3.3285;3.0824;3.0824;3.0824 -;-;-;-;-;-;-;-;-;- 381 + 1 1.955 32160.3 1.0 4822 4424 9246 SUDHL4_400M_050219_1,9248 SUDHL4_400M_050219_1,9248,SFRRTRCCFCL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9249 50.363 103.0 768750.0 25 0 83579.0 + 25928 NLLPKLHIV 9 83 523.8395683258346 1045.6645837184692 2 523.8400146365166 MULTI CID FTMS 0 0 0 9246 522385.09375 0.8403261806113411 1 -0.095428466796875 3 Unmodified _NLLPKLHIV_ ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1 48.345845343767074 0.0439967357579942 5 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H[{I|L}V] 9 0 + 56.348 0.0 0.0 5.3887 5.3887 91.367 0.0 0.0 0.0 8.26606256887672 3.65279269351241 3.65279269351241 24.286662482156338 0 1.3494850021680094 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H[{I|L}V];[H{I|L}]{I|L}KP{I|L}N[{I|L}V];[H{I|L}]{I|L}KPVQ[{I|L}V];[H{I|L}][KP]{I|L}{I|L}N[{I|L}V];[H{I|L}][KP]{I|L}VQ[{I|L}V];[H{I|L}]{I|L}KP{I|L}GG[{I|L}V];[H{I|L}]{I|L}KPV[AG][{I|L}V];[KP]{I|L}H{I|L}{I|L}N[{I|L}V];[KP]{I|L}H{I|L}VQ[{I|L}V];[H{I|L}][KP]{I|L}{I|L}GG[{I|L}V] 5.3887;3.0661;2.8977;2.5929;2.4245;2.1855;2.0171;1.9414;1.773;1.7123 +;-;-;-;-;-;-;-;-;- + 288 + 1 1.955 66780.3 1.0 4823 4424 9246 SUDHL4_400M_050219_1,9249 SUDHL4_400M_050219_1,9249,NLLPKLHIV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9250 50.364 75.0 792980.0 25 0 90057.0 + 31267 RLWGEPVNL 9 73 542.3005394483545 1082.5865259635088 2 542.3013183474541 MULTI CID FTMS 0 0 0 9246 498093.65625 0.4431883284097591 2 -0.22259521484375 4 Unmodified _RLWGEPVNL_ ENSG00000114374|ENST00000338981|USP9Y;ENSG00000124486|ENST00000378308|USP9X;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;nc|ENSG00000114374|O00507-2|USP9Y;nc|ENSG00000124486|Q93008-3|USP9X 36.506200033944 0.094635877243972 5 GEPVN{I|L} 6 3 50.438 0.0 0.0 4.659 0.0 0.0 455.26371962715 0.0 455.26371962715 0.0 28.711827458464256 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 + GEPVN{I|L} 4.659 + + 349 1 1.955 53252.3 1.0 4824 4424 9246 SUDHL4_400M_050219_1,9250 SUDHL4_400M_050219_1,9250,RLWGEPVNL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9251 50.367 148.0 215150.0 25 0 76995.0 + 30240 QWSRLRRRAGR 11 45 721.4221185689704 1440.8296842047407 2 721.4220458865166 MULTI CID FTMS 0 0 0 9246 426412.6875 1.0 0 0.0 5 Unmodified _QWSRLRRRAGR_ REV__ENST00000343028.8_3_12:27167184-27167292:-|nuORF 0.3506318815782774 0.8734936314171269 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.955 37679.9 1.0 4825 4424 9246 SUDHL4_400M_050219_1,9251 SUDHL4_400M_050219_1,9251,QWSRLRRRAGR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9252 50.369 88.0 523200.0 25 0 63595.0 + 10238 FQNPFRSEL 9 62 569.287751383858 1136.560949834516 2 569.2881347537041 MULTI CID FTMS 0 0 0 9246 296003.34375 0.7454410522310447 -1 0.0899314880371093 6 Unmodified _FQNQVDKMK_ ENSG00000073050|ENST00000262887|XRCC1 24.020572477871973 0.2255576514309169 5 PN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4 7 27.619 0.0 0.0 2.4301 0.0 0.0 650.3379994123062 0.0 650.3379994123062 0.0 17.134928107446186 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 PN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.4301 - 55 1 1.955 41661.9 1.0 4826 4424 9246 SUDHL4_400M_050219_1,9252 SUDHL4_400M_050219_1,9252,FQNQVDKMK False False FQNPFRSEL 50.369169 569.288134753704 4918024.0 9246.0 ENSG00000073050|ENST00000262887|XRCC1 5.550018946329753 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9253 50.373 185.0 290900.0 25 0 48418.0 + 18574 LAASDTCFYI 10 67 552.2577681195273 1102.5009833058546 2 552.2582885622978 MULTI CID FTMS 0 0 0 9246 179530.59375 1.0 0 0.0 7 Unmodified _LAASDTCFYI_ ENSG00000107147|ENST00000371757|KCNT1;nc|ENSG00000107147|Q5JUK3-2|KCNT1;nc|ENSG00000107147|Q5JUK3-4|KCNT1;nc|ENSG00000107147|Q5JUK3|KCNT1 28.486842064014134 0.328649637529545 5 [{I|L}A]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}Y{I|L} 9 3 + 25.625 0.0 0.0 2.3243 2.3243 73.126 0.0 0.0 0.0 1.5347590481702191 6.42930894610409 1.5347590481702191 1.5347590481702191 0 0.7429928190999391 1.3979400086720375 0.7614393726401688 0.0 [{I|L}A]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}Y{I|L};[Y{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{M(Oxidation (M))|F}Y{I|L};[Y{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[AG]{M(Oxidation (M))|F}Y{I|L};[Y{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[C(Carbamidomethyl (C))D]Y{I|L};[{I|L}A]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[ES]|[DT]|[{I|L}C]}E{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 2.3243;2.1851;1.345;1.3035;1.1453 -;-;-;-;- 133 1 1.955 47223.7 1.0 4827 4424 9246 SUDHL4_400M_050219_1,9253 SUDHL4_400M_050219_1,9253,LAASDTCFYI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9254 50.378 296.0 246410.0 25 0 26439.0 + 33902 SLFPNSPKW 9 97 538.2821204818024 1074.5496880304047 2 538.2825195193291 MULTI CID FTMS 0 0 0 9246 157519.515625 0.1305818103007786 4 -0.4713325500488281 8 Unmodified _SLFPNSPKW_ ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF 23.80106514851385 0.2283505500606397 5 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW 9 0 + 69.307 0.0 0.0 6.4499 6.4499 86.611 0.0 0.0 0.0 56.54279042320656 11.471449248951942 11.471449248951942 4.259687322722812 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSKPW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]SPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGSKPW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]SKPW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PN[RD]N{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[Q{I|L}]QPW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}P[KG][SG]PW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGG[RD]N{I|L} 6.4499;6.0534;5.5929;5.3128;5.1965;4.9164;4.1707;3.9132;3.4515;3.3137 +;-;-;-;-;-;-;-;-;- + 504 + 1 1.955 60628.3 1.0 4828 4424 9246 SUDHL4_400M_050219_1,9254 SUDHL4_400M_050219_1,9254,SLFPNSPKW False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9255 50.392 800.0 229090.0 25 0 12347.0 + -1 VQLNCFEK 8 139 1037.5130030462185 1036.5057265796186 1 1037.516894519329 MULTI CID FTMS 0 0 0 9246 155934.671875 1.0 0 0.0 9 Carbamidomethyl (C) _VQLNC(Carbamidomethyl (C))FEK_ REV__ENST00000466796.1_1_1:32682183-32682381:-|nuORF 30.22481116460888 0.4082965392918993 5 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NM{M(Oxidation (M))|F}ES 8 -1 69.563 0.0 0.0 6.7113 0.0 0.0 0.0 85.08169028494981 85.08169028494981 41.938200260161125 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.6989700043360187 2.5 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}NM{M(Oxidation (M))|F}ES 6.7113 - 3067 1 1.955 115792.9 0.7599999904632568 4829 4424 9246 SUDHL4_400M_050219_1,9255 SUDHL4_400M_050219_1,9255,VQLNCFEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9256 50.399 416.0 167040.0 25 0 20911.0 + -1 QKKCKRKN 8 96 545.3173942682274 0 545.3174316287041 PEAK CID FTMS 0 0 0 9246 148549.875 1.0 0 0.0 10 Carbamidomethyl (C) _QKKC(Carbamidomethyl (C))KRKN_ REV__ENST00000242159.4_1_7:27194333-27194531:-|nuORF 4.75600775471527 0.5825752635465162 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.955 60788.8 1.0 4830 4424 9246 SUDHL4_400M_050219_1,9256 SUDHL4_400M_050219_1,9256,QKKCKRKN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9257 50.403 191.0 158000.0 25 0 15498.0 + 34256 SLQETIQSL 9 56 509.7730650857413 1017.5315772382828 2 509.7749511599541 MULTI CID FTMS 0 0 0 9246 116843.2109375 0.2321579231288599 -5 0.544036865234375 11 Unmodified _SLQETIQSL_ ENSG00000119777|ENST00000238788|TMEM214;nc|ENSG00000119777|Q6NUQ4-2|TMEM214 19.256988751693697 0.3154191944385105 5 {[TV]|[{I|L}S]}Q 3 6 25.686 0.0 0.0 2.5244 0.0 0.0 0.0 686.3333099865827 686.3333099865827 11.706962271689749 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {[TV]|[{I|L}S]}Q 2.5244 + + 47 1 1.955 29681.9 1.0 4831 4424 9246 SUDHL4_400M_050219_1,9257 SUDHL4_400M_050219_1,9257,SLQETIQSL False True SLQETIQSL 50.403148 509.774951159954 838895.6875 9246.0 ENSG00000119777|ENST00000238788|TMEM214;;nc|ENSG00000119777|Q6NUQ4-2|TMEM214 3.268441359202067 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9258 50.417 800.0 87321.0 25 0 5099.3 3515 CRRWRYWEYWS 11 97 845.8912356916455 1689.767918450091 2 845.8950073122978 MULTI CID FTMS 0 0 0 9246 105535.6953125 0.1276029412353696 3 -0.3512382507324219 12 Unmodified _CRRWRYWEYWS_ ENST00000299314.11_1_12:102159966-102161843:-|nuORF 0.3070304955306653 0.8736993455979228 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQ{[QG]|[NA]}{M(Oxidation (M))|F}Y 11 10 58.547 0.0 0.0 3.4648 0.0 0.0 0.0 355.1949232236927 355.1949232236927 19.44225372691452 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.3494850021680094 2.360924374808178 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQ{[QG]|[NA]}{M(Oxidation (M))|F}Y 3.4648 - 842 1 1.955 52342.2 0.6499999761581421 4832 4424 9246 SUDHL4_400M_050219_1,9258 SUDHL4_400M_050219_1,9258,CRRWRYWEYWS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9259 50.431 800.0 99159.0 25 0 15298.0 + 1947 AMMKSMTVPF 10 114 571.773893079955 1141.53323322671 2 571.7738525271416 MULTI CID FTMS 0 0 0 9246 89449.4375 1.0 0 0.0 13 Unmodified _AMMKSMTVPF_ ENST00000512561.5_1_5:68651732-68651771:-|nuORF 17.11289562659939 0.5604042439455784 5 [YV]VCMKV[WD] 9 8 + 38.355 0.0 0.0 3.36 3.36 85.26 0.0 0.0 0.0 3.652792693512417 22.550631631319867 3.652792693512417 18.92667503568732 0 0.5 0.0 2.305462187404089 0.0 [YV]VCMKV[WD];[YV][W{M(Oxidation (M))|F}]KV[WD];{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YG]CVP{M(Oxidation (M))|F};[WD]VKMCVVY;{[DS]|[MA]|[CV]|TT}[TP]KMCVVY;[{I|L}A]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YG]CVP{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{[CP]|[EA]}KMCVVY;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AMCVVY;[WD]VKM[YG]P{M(Oxidation (M))|F};{[DS]|[MA]|[CV]|TT}[TP]KM[YG]P{M(Oxidation (M))|F} 3.36;1.702;1.3845;1.3712;1.2863;1.2369;1.1008;1.1008;1.0673;0.98236 -;-;-;-;-;-;-;-;-;- 739 + 1 1.955 66888.0 0.550000011920929 4833 4424 9246 SUDHL4_400M_050219_1,9259 SUDHL4_400M_050219_1,9259,AMMKSMTVPF False True AMMKSMTVPF 50.430836 571.773852527142 613752.1875 9246.0 ENST00000512561.5_1_5:68651732-68651771:-|nuORF 1.1116896569728851 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9260 50.446 800.0 110010.0 25 0 9040.0 + -1 AAAQLHGMRG 10 94 1027.5076123979582 1026.5003359313582 1 1027.506762683392 MULTI CID FTMS 0 0 0 9246 88306.78125 0.709157736581282 -1 0.0899314880371093 14 Oxidation (M) _AAAQLHGM(Oxidation (M))RG_ REV__ENST00000538113.1_1_12:28122304-28122715:+|nuORF 13.042465956692816 0.6287021003332052 5 QDPP{M(Oxidation (M))|F}NV 7 -1 50.723 0.0 0.0 4.9414 0.0 0.0 211.1326618878922 0.0 211.1326618878922 0.0 13.378778731580852 0.0 0.0 0 0.0 0.0 0.3252574989159953 1.4802046884880935 QDPP{M(Oxidation (M))|F}NV 4.9414 - 1713 1 1.955 61944.5 0.550000011920929 4834 4424 9246 SUDHL4_400M_050219_1,9260 SUDHL4_400M_050219_1,9260,AAAQLHGMRG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9261 50.449 159.0 407000.0 25 0 40013.0 + 9327 FIIQGLRSV 9 100 516.8136126999827 1031.6126724667654 2 516.8139526247978 MULTI CID FTMS 0 0 0 9246 121659.7109375 0.2401601896304704 3 -0.3512382507324219 15 Unmodified _FIIQGLRSV_ ENSG00000196735|ENST00000343139|HLA-DQA1;ENSG00000237541|ENST00000374940|HLA-DQA2;ENST00000460633.1_1_6:32610352-32610538:+|nuORF;ENST00000482745.5_1_6:32607639-32610538:+|nuORF 45.69961567697781 0.0497987121815769 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AGG{I|L}RSV 10 2 + 57.313 0.0 0.0 5.5556 5.5556 85.995 0.0 0.0 0.0 43.60139201890721 8.974867045093013 8.974867045093013 6.53212513775344 0 0.4247425010840047 0.0 0.5866968715561641 0.4247425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AGG{I|L}RSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}QG{I|L}RSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AN{I|L}RSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}GG{I|L}RSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AA[VG]RSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}N{I|L}RSV;[{I|L}A]{M(Oxidation (M))|F}QKA{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AG[RD]K{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}A[VG]RSV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}AK{[CP]|[EA]}K{I|L} 5.5556;4.9225;4.9225;4.3661;4.2005;3.7329;3.7175;3.2773;3.011;2.9855 -;+;-;-;-;-;-;-;-;- + 1046 + 1 1.955 58823.8 1.0 4835 4424 9246 SUDHL4_400M_050219_1,9261 SUDHL4_400M_050219_1,9261,FIIQGLRSV True True FIIQGLRSV 50.449298 516.813952624798 5692598.5 9246.0 ENST00000482745.5_1_6:32607639-32610538:+|nuORF;;ENSG00000237541|ENST00000374940|HLA-DQA2;;ENSG00000196735|ENST00000343139|HLA-DQA1;;ENST00000460633.1_1_6:32610352-32610538:+|nuORF 5.153153896331787 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9263 50.456 227.0 187220.0 25 0 27710.0 5334 DLGKFSKVLI 10 80 560.340182616347 1118.6658122994938 2 560.3405029177666 MULTI CID FTMS 0 0 0 9262 213824.734375 0.1288070741571544 4 -0.5127906799316406 1 Unmodified _DLGKFSKVLI_ ENST00000479971.1_1_12:72291642-72301148:+|nuORF 3.2813086475875832 0.7114585191678878 5 {I|L} 1 9 9.2082 0.0 0.0 0.82314 0.0 0.0 987.570320821758 0.0 987.570320821758 0.0 6.73393743112328 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.82314 + + 9 + 1 1.955 35961.0 1.0 4836 4425 9262 SUDHL4_400M_050219_1,9263 SUDHL4_400M_050219_1,9263,DLGKFSKVLI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9264 50.461 235.0 286620.0 25 0 32692.0 + 18316 KVLDLKINL 9 97 528.3447395429922 1054.6749261527843 2 528.3453857302666 MULTI CID FTMS 0 0 0 9262 187582.578125 0.3973886705905204 2 -0.2558097839355469 2 Unmodified _KVLDLKINL_ ENSG00000197969|ENST00000360280|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;nc|ENSG00000197969|Q96RL7-4|VPS13A 57.10758569107544 0.0276834916274374 5 KV{I|L}D{I|L}{I|L}KN{I|L} 9 2 + 67.525 0.0 0.0 6.4025 6.4025 92.613 0.0 0.0 0.0 20.731661347003424 12.587418566968154 12.587418566968154 12.09544243948811 0 1.6593793813122062 0.0 0.0 1.613982988912431 KV{I|L}D{I|L}{I|L}KN{I|L};KV{I|L}D{I|L}{I|L}KGG{I|L};{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}[{I|L}P]N{I|L};{I|L}[WR]{I|L}[RK]A{I|L};{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}[QP]{I|L}{I|L};{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}V[QP]{I|L}{I|L};{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}[NP]{I|L}{I|L} 6.4025;5.2556;2.5987;2.3055;1.8763;1.4699;1.4202 -;-;-;-;-;-;- 714 + 1 1.955 56292.6 1.0 4837 4425 9262 SUDHL4_400M_050219_1,9264 SUDHL4_400M_050219_1,9264,KVLDLKINL True True KVLDLKINL 50.46054 528.345385730267 6030856.5 9262.0 ENSG00000197969|ENST00000360280|VPS13A;;nc|ENSG00000197969|Q96RL7-2|VPS13A;;nc|ENSG00000197969|Q96RL7-4|VPS13A;;nc|ENSG00000197969|Q96RL7-3|VPS13A 2.544547438621521 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9265 50.462 39.0 1182800.0 25 0 134410.0 40954 VLVEYPMTL 9 51 532.7897168725991 1063.564880811998 2 532.7900268435478 MULTI CID FTMS 0 0 0 9262 1084873.5 0.3101840213299969 -1 0.095428466796875 3 Unmodified _VLVEYPMTL_ ENSG00000106605|ENST00000265523|BLVRA 17.11289562659939 0.3734572693229295 5 T{I|L} 2 7 23.333 0.0 0.0 2.1938 0.0 0.0 831.4220107942232 0.0 831.4220107942232 0.0 10.144979867444215 0.0 0.0 0 0.4247425010840047 0.0 0.2887254899964357 0.0 + T{I|L} 2.1938 + + 38 + 1 1.955 43809.9 1.0 4838 4425 9262 SUDHL4_400M_050219_1,9265 SUDHL4_400M_050219_1,9265,VLVEYPMTL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9266 50.464 88.0 536980.0 25 0 93544.0 + 11797 GLLSALREV 9 73 479.29138923126334 956.5682255293268 2 479.2913696169853 MULTI CID FTMS 0 0 0 9262 480406.40625 0.7212968926110188 -1 0.095428466796875 4 Unmodified _GLLSALREV_ REV__ENSG00000136367|ENST00000419474|ZFHX2 24.020572477871973 0.2255576514309169 5 {[VA]|[{I|L}G]}GT{I|L}{I|L} 6 -1 42.357 0.0 0.0 4.428 0.0 0.0 0.0 399.2024537953389 399.2024537953389 30.76274388132952 0.0 0.0 0.0 0 0.5 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}GT{I|L}{I|L} 4.428 - 197 1 1.955 45340.3 1.0 4839 4425 9262 SUDHL4_400M_050219_1,9266 SUDHL4_400M_050219_1,9266,GLLSALREV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9267 50.478 800.0 122650.0 25 0 34103.0 30926 RKFFHLWRRI 10 97 729.9350846384726 1457.8556163437452 2 729.9355346560478 MULTI CID FTMS 0 0 0 9262 231843.53125 1.0 0 0.0 5 Unmodified _RKFFHLWRRI_ ENST00000370008.3_1_1:109351697-109351763:+|nuORF 1.6526216038709556 0.7189921496796233 5 {I|L} 1 9 9.8329 0.0 0.0 0.67448 0.0 0.0 1326.760338489056 0.0 1326.760338489056 0.0 2.7545373444029053 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.67448 + + 63 + 1 1.955 86180.7 0.8399999737739563 4840 4425 9262 SUDHL4_400M_050219_1,9267 SUDHL4_400M_050219_1,9267,RKFFHLWRRI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9268 50.487 521.0 231590.0 25 0 12261.0 -1 0 106 921.9390573709636 1841.863561808727 2 921.946337878704 MULTI CID FTMS 0 0 0 9262 147502.453125 0.9980731376677322 5 -0.6916847229003906 6 5 Y{M(Oxidation (M))|F}A{[YD]|[{M(Oxidation (M))|F}M]}DG{I|L}{[MG]|[TS]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 13 -1 33.734 0.0 0.0 1.8315 0.0 0.0 359.20844825094974 0.0 359.20844825094974 0.0 17.492693724929286 0.0 0.0 0 0.3494850021680094 0.0 0.6307196863200843 0.0 Y{M(Oxidation (M))|F}A{[YD]|[{M(Oxidation (M))|F}M]}DG{I|L}{[MG]|[TS]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 1.8315 - 1404 + 1 1.955 82679.9 1.0 4841 4425 9262 SUDHL4_400M_050219_1,9268 SUDHL4_400M_050219_1,9268, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9269 50.491 238.0 261370.0 25 0 41630.0 -1 LSNGHTCVG 9 82 472.71741112743854 943.4202693216772 2 472.7179748415947 MULTI CID FTMS 0 0 0 9262 113086.9296875 0.3976720823955039 -1 0.095428466796875 7 Carbamidomethyl (C) _LSNGHTC(Carbamidomethyl (C))VG_ ENSG00000136250|ENST00000617537|AOAH 3.944395688203298 0.7769873103969335 5 V 1 -1 11.109 0.0 0.0 1.1775 0.0 0.0 826.3407461666951 0.0 826.3407461666951 0.0 1.4315336942163714 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1775 + + 42 + 1 1.955 54894.6 1.0 4842 4425 9262 SUDHL4_400M_050219_1,9269 SUDHL4_400M_050219_1,9269,LSNGHTCVG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9270 50.505 800.0 89433.0 25 0 17941.0 19270 LEKLALRDPRA 11 79 641.3849989839694 0 641.3854247927666 PEAK CID FTMS 0 0 0 9262 113504.0625 0.3548042804744673 2 -0.2558097839355469 8 Unmodified _LEKLALRDPRA_ ENST00000488463.5_1_1:40778452-40781106:-|nuORF 2.0860074813731053 0.4761840153648598 5 K 1 10 3.9794 0.0 0.0 0.31071 0.0 0.0 640.4149431810262 509.2277315729125 1149.6426747539383 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.31071 + + 2 + 1 1.955 60316.5 0.5899999737739563 4843 4425 9262 SUDHL4_400M_050219_1,9270 SUDHL4_400M_050219_1,9270,LEKLALRDPRA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9271 50.519 800.0 61123.0 25 0 18515.0 + -1 RLRRLLPFWLC 11 68 765.4482057946134 1528.881858656027 2 765.4485961794853 MULTI CID FTMS 0 0 0 9262 103341.8125 0.5389762339947175 -7 0.6544837951660156 9 Carbamidomethyl (C) _RLRRLLPFWLC(Carbamidomethyl (C))_ REV__AluJb_dup59924|chr9:37399956-37400259:-|1.168618289648749|0.0039503058064583|8.21|48.0|5|2|sense 0.3506318815782774 0.8734936314171269 5 {I|L} 1 -1 10.181 0.0 0.0 0.66592 0.0 0.0 1397.7870233062204 0.0 1397.7870233062204 0.0 9.07181711519044 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.66592 + + 9 + 1 1.955 45788.3 0.5699999928474426 4844 4425 9262 SUDHL4_400M_050219_1,9271 SUDHL4_400M_050219_1,9271,RLRRLLPFWLC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9272 50.534 800.0 137530.0 25 0 21804.0 19521 LFNDLLVICR 10 128 603.3416754691739 1204.6687980051477 2 603.3413574099541 MULTI CID FTMS 0 0 0 9262 91200.34375 0.6282238353260702 -2 0.1853599548339843 10 Unmodified _LFNDLLVICR_ ENSG00000066248|ENST00000264051|NGEF;nc|ENSG00000066248|Q8N5V2-3|NGEF 2.9952420565917617 0.7127817445270067 5 T{M(Oxidation (M))|F}E 3 9 16.198 0.0 0.0 1.3446 0.0 0.0 163.17460962799765 661.3166597955686 824.4912694235663 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T{M(Oxidation (M))|F}E 1.3446 - 42 + 1 1.955 83412.7 0.5400000214576721 4845 4425 9262 SUDHL4_400M_050219_1,9272 SUDHL4_400M_050219_1,9272,LFNDLLVICR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9273 50.548 800.0 183980.0 25 0 31609.0 + 42614 VTSSNGFL 8 137 412.7130904583879 0 412.7130309939384 PEAK CID FTMS 0 0 0 9262 86174.8359375 0.878941414790474 -1 0.095428466796875 11 Unmodified _VTSSNGFL_ REV__ENSG00000148965|ENST00000278222|SAA4 8.593279151180031 0.5573742999696857 5 C{I|L}D 3 -1 16.333 0.0 0.0 1.9835 0.0 0.0 99.0676116759084 390.1894536155345 489.25706529144287 0.0 0.0 0.0 0.0 0 0.0843105420796064 0.0 0.3807196863200844 0.0 C{I|L}D 1.9835 - 16 + 1 1.955 115604.6 0.7200000286102295 4846 4425 9262 SUDHL4_400M_050219_1,9273 SUDHL4_400M_050219_1,9273,VTSSNGFL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9274 50.561 800.0 103990.0 25 0 8105.8 19944 LIDLMLLLY 9 129 553.8302155004916 1105.645878067783 2 553.8298217654228 MULTI CID FTMS 0 0 0 9262 84908.75 0.6841500422513791 1 -0.127166748046875 12 Unmodified _LIDLMLLLY_ ENST00000483636.5_1_3:151488357-151501690:+|nuORF 13.50788311687929 0.4710407108020397 5 {I|L}{I|L}DV 4 6 16.488 0.0 0.0 1.4913 0.0 0.0 0.0 662.3590793219424 662.3590793219424 2.464621706934487 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {I|L}{I|L}DV 1.4913 - 187 1 1.955 70520.3 0.4399999976158142 4847 4425 9262 SUDHL4_400M_050219_1,9274 SUDHL4_400M_050219_1,9274,LIDLMLLLY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9275 50.576 800.0 75500.0 25 0 11703.0 + 19317 LELRPRSRYRL 11 97 486.9594269248117 1457.8564513746353 3 486.9590331912041 MULTI CID FTMS 0 0 0 9262 81428.6171875 0.8159515417208952 2 -0.2558097839355469 13 Unmodified _LELRPRSRYRL_ ENSG00000117400|ENST00000372470|MPL;nc|ENSG00000117400|P40238-2|MPL 5.731851221503515 0.8481046878870278 5 {[QN]|[E{I|L}]|[KN]}{I|L}M 4 8 20.891 0.0 0.0 1.433 0.0 0.0 0.0 968.5928459881696 968.5928459881696 7.703037561203843 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}M 1.433 - 54 1 1.955 57807.6 0.3899999856948852 4848 4425 9262 SUDHL4_400M_050219_1,9275 SUDHL4_400M_050219_1,9275,LELRPRSRYRL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9277 50.581 11.0 5545100.0 25 0 579480.0 + 40995 VMAPRTLLL 9 71 507.31237334472144 1012.6101937562428 2 507.3127319216728 MULTI CID FTMS 0 0 0 9276 4814420.0 0.8977578616654193 1 -0.1286430358886718 1 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 36.506200033944 0.094635877243972 5 VMA 3 6 55.445 0.0 0.0 5.4755 0.0 0.0 0.0 708.442031080622 708.442031080622 15.892718607161171 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMA 5.4755 + + 49 + 1 1.955 51123.1 1.0 4849 4426 9276 SUDHL4_400M_050219_1,9277 SUDHL4_400M_050219_1,9277,VMAPRTLLL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9278 50.582 44.0 1273500.0 25 0 268360.0 + 33942 SLHDAIMIV 9 59 499.77032892692375 997.5261049206476 2 499.7709838747978 MULTI CID FTMS 0 0 0 9276 1030032.625 0.4580150257519685 1 -0.1286430358886718 2 Unmodified _SLHDAIMIV_ ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 34.10243960390752 0.1078313939113124 5 [HD]A{I|L}S{I|L}M{I|L}V 9 4 + 44.046 0.0 0.0 4.4155 4.4155 83.483 0.0 0.0 0.0 0.4575749056067479 26.16582797736562 0.4575749056067479 8.266062568876713 0 0.8182503180159344 0.0 0.6989700043360187 0.0 [HD]A{I|L}S{I|L}M{I|L}V;[HD]A{I|L}SM{I|L}{I|L}V;[HD]{[TV]|[{I|L}S]}A{I|L}M{I|L}V;[HD]A{I|L}MS{I|L}{I|L}V;[HD]{[TV]|[{I|L}S]}AM{I|L}{I|L}V 4.4155;3.5869;3.4412;2.7582;2.6125 -;-;-;-;- 159 1 1.955 47947.6 1.0 4850 4426 9276 SUDHL4_400M_050219_1,9278 SUDHL4_400M_050219_1,9278,SLHDAIMIV True True SLHDAIMIV 50.582468 499.770983874798 32120636.0 9276.0 nc|ENSG00000135624|Q99832-2|CCT7;;nc|ENSG00000135624|Q99832-4|CCT7;;ENSG00000135624|ENST00000258091|CCT7;;nc|ENSG00000135624|Q99832-3|CCT7 5.596078713734944 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9279 50.584 34.0 1438900.0 25 0 150230.0 + 26069 NMVDIIHSV 9 85 514.2657220905295 1026.516891247859 2 514.2660400271416 MULTI CID FTMS 0 0 0 9276 1572598.375 1.0 0 0.0 3 Unmodified _NMVDIIHSV_ ENSG00000114054|ENST00000251654|PCCB;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;nc|ENSG00000114054|P05166-2|PCCB 71.13359017698441 0.0206607516130725 5 [MN]VD{I|L}{I|L}H[VS] 9 0 + 65.65 0.0 0.0 6.3954 6.3954 94.87 0.0 0.0 0.0 40.30990451261894 12.544870004022115 12.544870004022115 51.73149510222147 0 0.805462187404089 1.6989700043360187 1.579689690656103 0.0 + + [MN]VD{I|L}{I|L}H[VS];[HS]V{I|L}[{M(Oxidation (M))|F}V]YY;[HS]{I|L}V[{M(Oxidation (M))|F}V]YY;[H{I|L}]SV[{M(Oxidation (M))|F}V]YY 6.3954;1.3559;0.82586;0.73145 +;-;-;- + 240 + 1 1.955 42913.9 1.0 4851 4426 9276 SUDHL4_400M_050219_1,9279 SUDHL4_400M_050219_1,9279,NMVDIIHSV True True NMVDIIHSV 50.583647 514.266040027142 10710971.1875 9276.0 ENSG00000114054|ENST00000251654|PCCB;;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;;nc|ENSG00000114054|P05166-2|PCCB 7.785719235738118 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9280 50.585 67.0 579080.0 25 0 79092.0 + 40532 VIWGTDVNV 9 63 501.76626768890816 1001.5179824446165 2 501.7665893435478 MULTI CID FTMS 0 0 0 9276 633784.1875 0.3903907384908893 1 -0.1286430358886718 4 Unmodified _VIWGTDVNV_ ENSG00000104738|ENST00000649973|MCM4 24.67388899826682 0.2172451872415813 5 [DV][MN]V{I|L} 6 6 31.528 0.0 0.0 3.148 0.0 0.0 0.0 327.1639534741664 327.1639534741664 16.923487412610356 0.0 0.0 0.0 0 0.0 1.0 0.7614393726401688 0.4247425010840047 [DV][MN]V{I|L} 3.148 - 81 1 1.955 34821.6 1.0 4852 4426 9276 SUDHL4_400M_050219_1,9280 SUDHL4_400M_050219_1,9280,VIWGTDVNV False True VIWGTDVNV 50.585249 501.7669 24276960.0 9276.0 ENSG00000104738|ENST00000649973|MCM4 4.09840202331543 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9281 50.589 180.0 439310.0 25 0 33698.0 -1 0 72 887.4125322760457 1772.8105116188913 2 887.4135009646416 MULTI CID FTMS 0 0 0 9276 362292.90625 0.4430001728688262 1 -0.1286430358886718 5 5 DEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 12 -1 86.196 0.0 0.0 4.8621 0.0 0.0 348.1544666974625 0.0 348.1544666974625 0.0 66.98760662364698 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 1.2302046884880935 DEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 4.8621 - 1116 1 1.955 59332.3 1.0 4853 4426 9276 SUDHL4_400M_050219_1,9281 SUDHL4_400M_050219_1,9281, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9282 50.592 147.0 511160.0 25 0 36887.0 + 25434 NEFPEPIKL 9 81 543.7948049884227 1085.5750570436453 2 543.7953369021416 MULTI CID FTMS 0 0 0 9276 349787.125 0.4209721468775095 -2 0.22259521484375 6 Unmodified _NEFPEPIKL_ ENSG00000075785|ENST00000265062|RAB7A 36.506200033944 0.094635877243972 5 [{I|L}P]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{M(Oxidation (M))|F} 7 7 33.561 0.0 0.0 3.0915 0.0 0.0 0.0 240.061646269716 240.061646269716 16.997094513270916 0.0 0.0 0.0 0 1.0 1.3979400086720375 0.3807196863200844 0.0 [{I|L}P]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{M(Oxidation (M))|F} 3.0915 - 150 1 1.955 64064.4 1.0 4854 4426 9276 SUDHL4_400M_050219_1,9282 SUDHL4_400M_050219_1,9282,NEFPEPIKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9283 50.6 459.0 182030.0 25 0 24798.0 -1 GLHCRMVQEC 10 91 624.7672279503176 1247.5199029674352 2 624.7678710818291 MULTI CID FTMS 0 0 0 9276 171746.4375 1.0 0 0.0 7 Carbamidomethyl (C),Oxidation (M) _GLHC(Carbamidomethyl (C))RM(Oxidation (M))VQEC_ ENST00000534320.5_1_11:587364-591403:+|nuORF 7.289230182591677 0.6929195370588109 5 {[DA]|[EG]}DA{I|L} 5 -1 26.827 0.0 0.0 2.1504 0.0 0.0 0.0 759.2848514968229 759.2848514968229 12.926288272058882 0.0 0.0 0.0 0 0.0 0.6777807052660807 0.6237125054200234 0.0 {[DA]|[EG]}DA{I|L} 2.1504 - 298 1 1.955 67866.3 1.0 4855 4426 9276 SUDHL4_400M_050219_1,9283 SUDHL4_400M_050219_1,9283,GLHCRMVQEC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9284 50.609 497.0 238840.0 25 0 20946.0 + 44379 YLTEQLVAIYH 11 117 675.3576002907516 1348.7006476483032 2 675.3578369021416 MULTI CID FTMS 0 0 0 9276 146030.09375 0.866838910449248 -1 0.127166748046875 8 Unmodified _YLTEQLVAIYH_ ENST00000542112.5_1_11:62621512-62623345:-|nuORF 78.7280429016045 0.0086025745061204 5 [Y{I|L}]TEQ{I|L}VA{I|L}YH 11 0 + 102.01 0.0 0.0 7.5639 7.5639 95.587 0.0 0.0 0.0 55.257664315070976 13.604710706454426 13.604710706454426 14.128498242811006 0 1.2302046884880935 2.0 0.0 0.5 + + [Y{I|L}]TEQ{I|L}VA{I|L}YH;[Y{I|L}]TE[AG]{I|L}VA{I|L}YH;[Y{I|L}]T{[WS]|[C(Carbamidomethyl (C)){I|L}]}PVA{I|L}YH;[Y{I|L}]TEQ{I|L}VA{[WN]|[YH]}{I|L};[Y{I|L}]TEQ{I|L}VA[WQ]V;[Y{I|L}]TE[AG]{I|L}VA{[WN]|[YH]}{I|L};[Y{I|L}]TE[AG]{I|L}VA[WQ]V;[Y{I|L}]TEQ{I|L}V[C(Carbamidomethyl (C))K]PV;[Y{I|L}]TTQT[{I|L}P]{I|L}YH;[Y{I|L}]TTQTAV{I|L}Q[DP] 7.5639;6.5163;5.6723;5.6719;5.6246;4.995;4.9478;4.6401;4.3019;4.2158 +;-;-;-;-;-;-;-;-;- + 2456 + 1 1.955 91126.1 1.0 4856 4426 9276 SUDHL4_400M_050219_1,9284 SUDHL4_400M_050219_1,9284,YLTEQLVAIYH True True YLTEQLVAIYH 50.608641 675.357836902142 1661197.75 9276.0 ENST00000542112.5_1_11:62621512-62623345:-|nuORF 7.056038061777751 2.0 True 11.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9285 50.615 375.0 182050.0 25 0 19548.0 + 40622 VLDDKDYFL 9 88 564.2844382535743 1126.5543235739483 2 564.2839233279228 MULTI CID FTMS 0 0 0 9276 143564.109375 0.2787481774478627 2 -0.2487373352050781 9 Unmodified _VLDDKDYFL_ ENSG00000115541|ENST00000233893|HSPE1;ENST00000465573.1_1_2:198365552-198367980:+|nuORF;ENST00000550617.1_1_12:102267096-102267252:-|nuORF 25.399314129420983 0.2080152500878129 5 V{I|L} 2 7 43.271 0.0 0.0 3.841 0.0 0.0 0.0 911.380037324862 911.380037324862 20.976277995878547 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + V{I|L} 3.841 + + 155 + 1 1.955 58178.9 1.0 4857 4426 9276 SUDHL4_400M_050219_1,9285 SUDHL4_400M_050219_1,9285,VLDDKDYFL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9286 50.625 559.0 123240.0 25 0 20022.0 + -1 LRPLPFIFIHF 11 104 481.28348418622863 1440.828623158886 3 481.2838928103447 MULTI CID FTMS 0 0 0 9276 133546.640625 0.5593570713538519 3 -0.3856239318847656 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LRPLPFIFIHF_ REV__ENST00000281834.3_1_1:173176320-173176428:-|nuORF 1.4819007175156935 0.86815623132643 5 {M(Oxidation (M))|F} 1 -1 13.495 0.0 0.0 0.9366 0.0 0.0 1275.7495653969702 0.0 1275.7495653969702 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.9366 + + 41 + 1 1.955 66822.6 1.0 4858 4426 9276 SUDHL4_400M_050219_1,9286 SUDHL4_400M_050219_1,9286,LRPLPFIFIHF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9287 50.639 800.0 152590.0 25 0 10516.0 + 34177 SLNALLGV 8 159 393.73947335908434 785.4643937849687 2 393.7395812869072 MULTI CID FTMS 0 0 0 9276 123466.265625 1.0 0 0.0 11 Unmodified _SLNALLGV_ REV__ENSG00000008710|ENST00000262304|PKD1;REV__ENST00000532415.5_1_16:18480742-18495490:-|nuORF;REV__nc|ENSG00000008710|P98161-2|PKD1;REV__nc|ENSG00000008710|P98161-3|PKD1 38.15118350030904 0.2652218139009398 5 {[TV]|[{I|L}S]}{[QG]|[NA]}{I|L}{I|L}GV 8 -1 {[TV]|[{I|L}S]}{[QG]|[NA]}{I|L} + + 18.5 15.348 3.0802 2.3553 2.3553 53.247 0.0 0.0 0.0 0.0 8.967042893576055 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {[TV]|[{I|L}S]}{[QG]|[NA]}{I|L}{I|L}GV 2.3553 + + 119 + 1 1.955 97812.2 0.8100000023841858 4859 4426 9276 SUDHL4_400M_050219_1,9287 SUDHL4_400M_050219_1,9287,SLNALLGV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9288 50.653 800.0 71381.0 25 0 15532.0 24458 MHRHRKTLKRL 11 86 738.4485462460558 1474.8825395589115 2 738.4484741091728 MULTI CID FTMS 0 0 0 9276 123100.9765625 0.7070224168050027 1 -0.1286430358886718 12 Unmodified _MHRHRKTLKRL_ ENST00000483900.1_1_1:247024290-247024365:-|nuORF 0.3506318815782774 0.8734936314171269 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{M(Oxidation (M))|F} 4 9 11.797 0.0 0.0 0.79985 0.0 0.0 0.0 951.680488127524 951.680488127524 1.2008993357298614 0.0 0.0 0.0 0 0.0 0.0 0.5114393726401688 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E{M(Oxidation (M))|F} 0.79985 - 25 1 1.955 50140.4 0.5899999737739563 4860 4426 9276 SUDHL4_400M_050219_1,9288 SUDHL4_400M_050219_1,9288,MHRHRKTLKRL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9289 50.665 610.0 235700.0 25 0 18233.0 + 1470 ALFPGDVDRL 10 139 551.79801338921 1101.58147384522 2 551.7987548708916 MULTI CID FTMS 0 0 0 9276 100254.0859375 1.0 0 0.0 13 Unmodified _ALFPGDVDRL_ ENSG00000100994|ENST00000216962|PYGB 32.037481411007896 0.2488723560272515 5 [{I|L}A]{M(Oxidation (M))|F}PGDVDR{I|L} 10 0 + 66.987 0.0 0.0 6.081 6.081 92.758 0.0 0.0 0.0 53.4973005573481 11.54901959985743 11.54901959985743 18.344434124834365 0 0.7302046884880937 1.3010299956639813 0.0 0.0 + + [{I|L}A]{M(Oxidation (M))|F}PGDVDR{I|L};[{I|L}A]{M(Oxidation (M))|F}PGDV{[RE]|[WV]}V;[{I|L}A]{M(Oxidation (M))|F}P[RD]DR{I|L};[{I|L}A][KQ]C(Carbamidomethyl (C))VDR{I|L};[{I|L}A]{M(Oxidation (M))|F}{I|L}GK[YQ]Y;[{I|L}A]{M(Oxidation (M))|F}P[RD]{[RE]|[WV]}V;[{I|L}A][KQ][CG]VDR{I|L};[{I|L}A]{M(Oxidation (M))|F}{I|L}GK[YG]S{M(Oxidation (M))|F};[{I|L}A]{M(Oxidation (M))|F}[HT][MN]R{I|L};[{I|L}A]{M(Oxidation (M))|F}{I|L}GK[YG]AY 6.081;4.4157;4.3324;3.3487;2.6678;2.6671;2.5128;2.4752;2.357;2.3154 +;-;-;-;-;-;-;-;-;- + 680 + 1 1.955 112323.5 1.0 4861 4426 9276 SUDHL4_400M_050219_1,9289 SUDHL4_400M_050219_1,9289,ALFPGDVDRL False True ALFPGDVDRL 50.664982 551.798754870892 2060472.5 9276.0 ENSG00000100994|ENST00000216962|PYGB 6.38218879699707 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9290 50.679 800.0 119940.0 25 0 13943.0 + 12933 HAAWGVIG 8 140 405.7183830348805 0 405.7185851931572 PEAK CID FTMS 0 0 0 9276 100840.3203125 1.0 0 0.0 14 Unmodified _HAAWGVIG_ REV__ENSG00000095464|ENST00000371447|PDE6C 2.889219685676258 0.5898224805723975 5 {I|L} 1 -1 8.8515 0.0 0.0 1.0936 0.0 0.0 522.2379639608876 171.0777529352172 693.3157168961047 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L} 1.0936 + + 18 + 1 1.955 78576.7 0.4000000059604645 4862 4426 9276 SUDHL4_400M_050219_1,9290 SUDHL4_400M_050219_1,9290,HAAWGVIG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9291 50.682 86.0 833440.0 25 0 75710.0 -1 0 73 915.4418211679772 1828.869089402754 2 915.9442016482352 MULTI CID FTMS 0 0 0 9276 316394.09375 0.3991437220184572 -1 0.127166748046875 15 5 [KT]EY{M(Oxidation (M))|F}ANQQAEEVC(Carbamidomethyl (C)){I|L} 15 -1 + 83.81 0.0 0.0 4.5826 4.5826 79.791 0.0 0.0 0.0 56.75881917084361 14.304461535987445 14.304461535987445 3.0102999566398125 0 0.0 0.0 0.0 0.4247425010840047 [KT]EY{M(Oxidation (M))|F}ANQQAEEVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQAEEC(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]AEEVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}ANQQAEEV[CG]{I|L};[KT]EY{M(Oxidation (M))|F}AGGQQAEEVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]QAEEVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AGGQQAEEC(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]QAEEC(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQAEE[CG]V{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]AEEC(Carbamidomethyl (C))V{I|L} 4.5826;4.418;4.0888;4.0888;4.0888;4.0888;3.9242;3.9242;3.9242;3.9242 -;-;-;-;-;-;-;-;-;- 1884 + 1 1.955 53289.3 1.0 4863 4426 9276 SUDHL4_400M_050219_1,9291 SUDHL4_400M_050219_1,9291, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9292 50.696 800.0 60360.0 25 0 3154.6 -1 0 85 930.4474170386204 1858.880281144041 2 930.9512817263604 MULTI CID FTMS 0 0 0 9276 120936.3828125 0.8195599748200049 2 -0.2487373352050781 16 5 ANQ[HA][KC]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 10 -1 22.396 0.0 0.0 1.2048 0.0 0.0 668.34747960116 0.0 668.34747960116 0.0 14.670306400511702 0.0 0.0 0 0.0 0.0 0.0 0.0 ANQ[HA][KC]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 1.2048 - 439 + 1 1.955 35263.4 0.7200000286102295 4864 4426 9276 SUDHL4_400M_050219_1,9292 SUDHL4_400M_050219_1,9292, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9293 50.697 47.0 277660.0 25 0 22551.0 18609 LAELKIPE 8 40 456.7737277177031 0 456.7735778689384 PEAK CID FTMS 0 0 0 9276 102059.0546875 0.1884964430917184 -2 0.22259521484375 17 Unmodified _LAELKIPE_ ENST00000473758.5_1_14:23533663-23536544:-|nuORF 0.7936320650641473 0.5979579398327216 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.955 17987.0 1.0 4865 4426 9276 SUDHL4_400M_050219_1,9293 SUDHL4_400M_050219_1,9293,LAELKIPE False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9294 50.705 456.0 173460.0 25 0 15395.0 29361 QKELYKTVTL 10 103 611.8538217837762 1221.6930906343523 2 611.8538696169853 MULTI CID FTMS 0 0 0 9276 98683.7890625 1.0 0 0.0 18 Unmodified _QKELYKTVTL_ ENSG00000141040|ENST00000395825|ZNF287 5.731851221503515 0.7001233259664787 5 Q{M(Oxidation (M))|F}[K{I|L}] 4 7 16.198 0.0 0.0 1.3259 0.0 0.0 687.3577748029312 0.0 687.3577748029312 0.0 6.865582124735026 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{M(Oxidation (M))|F}[K{I|L}] 1.3259 - 27 1 1.955 62436.4 1.0 4866 4426 9276 SUDHL4_400M_050219_1,9294 SUDHL4_400M_050219_1,9294,QKELYKTVTL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9296 50.71 30.0 1279200.0 25 0 85881.0 -1 0 51 881.4114268818424 1760.8083008304848 2 881.9097167849541 MULTI CID FTMS 0 0 0 9295 1658920.875 0.0950468476114945 6 -0.8797073364257812 1 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YE[{I|L}P] 15 -1 + 73.567 0.0 0.0 4.178 4.178 81.829 0.0 0.0 0.0 6.648508211874173 55.406075122407685 6.648508211874173 6.690067809585756 0 0.0 1.3010299956639813 0.0 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQW{M(Oxidation (M))|F}YE[{I|L}P];[YQ]V[CS]AQQDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QDA{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]DA{M(Oxidation (M))|F}YE[{I|L}P];[YQ]V[CS]AQQW{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QW{M(Oxidation (M))|F}YE[{I|L}P];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]W{M(Oxidation (M))|F}YE[{I|L}P];[YQ]V[CS]A[AG]QDA{M(Oxidation (M))|F}YE[{I|L}P];[YQ]V[CS]AQ[AG]DA{M(Oxidation (M))|F}YE[{I|L}P] 4.178;3.7981;3.781;3.6651;3.6651;3.4011;3.2841;3.2841;3.2682;3.2682 -;-;-;-;-;-;-;-;-;- 697 1 1.955 31249.9 1.0 4867 4427 9295 SUDHL4_400M_050219_1,9296 SUDHL4_400M_050219_1,9296, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9297 50.713 135.0 336210.0 25 0 48590.0 + -1 MKNCRVWK 8 68 569.287751383858 1136.560949834516 2 569.2881957888603 MULTI CID FTMS 0 0 0 9295 192576.34375 0.4849753063636038 2 -0.2569808959960937 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))KNC(Carbamidomethyl (C))RVWK_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-10|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-3|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42-9|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 13.50788311687929 0.7113601687236069 5 E{M(Oxidation (M))|F}N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 5 -1 28.015 0.0 0.0 2.4649 0.0 0.0 471.2796946779464 0.0 471.2796946779464 0.0 17.557809497117844 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 E{M(Oxidation (M))|F}N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.4649 - 68 1 1.955 40230.5 1.0 4868 4427 9295 SUDHL4_400M_050219_1,9297 SUDHL4_400M_050219_1,9297,MKNCRVWK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9298 50.714 25.0 1894200.0 25 0 274840.0 + 34130 SLLSHVEQL 9 81 513.2849957692071 1024.555438605214 2 513.2851440310478 MULTI CID FTMS 0 0 0 9295 1231325.125 1.0 0 0.0 3 Unmodified _SLLSHVEQL_ ENSG00000116670|ENST00000376692|MAD2L2;ENST00000376664.10_1_1:11735929-11741152:-|nuORF 52.268347100219714 0.0353964759249114 5 {[TV]|[{I|L}S]}HVTVE[Q{I|L}] 9 3 + 60.596 0.0 0.0 5.9143 5.9143 84.037 0.0 0.0 0.0 9.246199743006043 26.503924710485904 9.246199743006043 3.252574989159953 0 0.4247425010840047 2.0 0.6505149978319906 0.0 {[TV]|[{I|L}S]}HVTVE[Q{I|L}];{[TV]|[{I|L}S]}HVEVT[Q{I|L}];{[TV]|[{I|L}S]}HVEVV{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}HD{I|L}VT[Q{I|L}];{[TV]|[{I|L}S]}HVEE{I|L}[KA];{[TV]|[{I|L}S]}{I|L}{[CA]|SS}TV[YR];{[TV]|[{I|L}S]}{I|L}E[VS]HQ{I|L};{[TV]|[{I|L}S]}HD{I|L}VV{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}{[MG]|[TS]}VTV[YR];{[TV]|[{I|L}S]}HD{I|L}E{I|L}[KA] 5.9143;5.5969;5.0092;5.0092;4.9147;4.9133;4.4919;4.4216;4.4017;4.327 -;-;-;-;-;-;-;-;-;- 968 1 1.955 41069.7 1.0 4869 4427 9295 SUDHL4_400M_050219_1,9298 SUDHL4_400M_050219_1,9298,SLLSHVEQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9299 50.715 55.0 700320.0 25 0 148260.0 + -1 KKKKKMMIP 9 55 582.353526390225 1162.69249984725 2 582.3538696169853 MULTI CID FTMS 0 0 0 9295 826972.875 0.5754100670493002 -1 0.1286430358886718 4 2 Oxidation (M) _KKKKKM(Oxidation (M))M(Oxidation (M))IP_ REV__ENSG00000047849|ENST00000683076|MAP4 0.6014990680409731 0.8936861360942873 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.955 38806.5 1.0 4870 4427 9295 SUDHL4_400M_050219_1,9299 SUDHL4_400M_050219_1,9299,KKKKKMMIP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9300 50.717 72.0 749800.0 25 0 196360.0 40349 VHPRLLHLPV 10 57 590.8667026655556 1179.7188523979112 2 590.8668701052666 MULTI CID FTMS 0 0 0 9295 510767.1875 0.3237725009759994 -1 0.1286430358886718 5 Unmodified _VHPRLLHLPV_ ENST00000469672.5_1_14:74762559-74769587:-|nuORF;ENST00000555617.5_1_14:74759536-74766325:-|nuORF 0.4583401331227399 0.7245164002484112 5 P 1 9 0.48455 0.0 0.0 0.041073 0.0 0.0 981.6002133371676 98.03800378970936 1079.638217126877 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.041073 + + 3 + 1 1.955 48241.9 1.0 4871 4427 9295 SUDHL4_400M_050219_1,9300 SUDHL4_400M_050219_1,9300,VHPRLLHLPV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9301 50.719 98.0 619280.0 25 0 71779.0 + 1654 ALNELLQHV 9 94 518.7933910374257 1035.5722291416514 2 518.7929565310478 MULTI CID FTMS 0 0 0 9295 441373.65625 0.6884365988125943 -1 0.1286430358886718 6 Unmodified _ALNELLQHV_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 85.27202061508552 0.0162393975915471 5 [{I|L}A]NE{I|L}{I|L}QHV 9 0 + 86.181 0.0 0.0 8.3221 8.3221 94.535 0.0 0.0 0.0 56.49797211252192 10.20181229336984 10.20181229336984 9.208187539523747 0 1.1549471895720984 2.0 0.8494850021680094 0.805462187404089 + + [{I|L}A]NE{I|L}{I|L}QHV;[{I|L}A]GGE{I|L}{I|L}QHV;[{I|L}A]NE{I|L}{I|L}[AG]HV;[{I|L}A]GGE{I|L}{I|L}[AG]HV;[{I|L}A]GD{I|L}[H{I|L}]N[{I|L}A];[{I|L}A]GD{I|L}[HQ]V[{I|L}A];[{I|L}A]GH{I|L}{NN|[MP]|[D{I|L}]|[EV]}N[{I|L}A];[{I|L}A]GD{I|L}[H{I|L}]GG[{I|L}A];[{I|L}A]GH{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}V[{I|L}A];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}[H{I|L}]N[{I|L}A] 8.3221;7.4329;7.0227;5.7701;3.1504;2.9803;2.3054;2.2654;2.1353;1.6309 +;-;-;-;-;-;-;-;-;- + 233 + 1 1.955 52686.6 1.0 4872 4427 9295 SUDHL4_400M_050219_1,9301 SUDHL4_400M_050219_1,9301,ALNELLQHV True True ALNELLQHV 50.719171 518.792956531048 4362341.5 9295.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 8.090074221293131 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9302 50.722 122.0 460680.0 25 0 73776.0 + 2243 AQFEHTILL 9 85 536.2955526279894 1070.5765523227788 2 536.2956420779228 MULTI CID FTMS 0 0 0 9295 278306.125 0.2218465408534307 -1 0.1286430358886718 7 Unmodified _AQFEHTILL_ ENSG00000111142|ENST00000323666|METAP2;nc|ENSG00000111142|P50579-2|METAP2;nc|ENSG00000111142|P50579-3|METAP2 34.40172386719151 0.1061884637610825 5 [{M(Oxidation (M))|F}E]HT{I|L}[QA]{I|L}{I|L} 9 4 + 53.579 0.0 0.0 5.0047 5.0047 59.213 0.0 0.0 0.0 1.249387366082999 16.478174818886373 1.249387366082999 0.0 0 0.9247425010840048 0.0 1.1989700043360187 0.0 [{M(Oxidation (M))|F}E]HT{I|L}[QA]{I|L}{I|L};[{M(Oxidation (M))|F}E]HT[QA]{I|L}{I|L}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}T{I|L}[QA]{I|L}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}T[QA]{I|L}{I|L}{I|L};[{M(Oxidation (M))|F}E]H[QA]T{I|L}{I|L}{I|L};[{M(Oxidation (M))|F}E]HT{I|L}{I|L}[QA]{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}[QA]T{I|L}{I|L}{I|L};[QA][WE]{I|L}[QA]{I|L}{I|L};[QA][WE][QA]{I|L}{I|L}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}T{I|L}{I|L}[QA]{I|L} 5.0047;5.0047;4.888;4.888;4.2326;4.1409;4.1159;4.0956;4.0956;4.0242 -;-;-;-;-;-;-;-;-;- 230 1 1.955 45752.7 1.0 4873 4427 9295 SUDHL4_400M_050219_1,9302 SUDHL4_400M_050219_1,9302,AQFEHTILL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9303 50.736 800.0 215570.0 25 0 12895.0 -1 0 156 1044.8401853982757 3131.498726795028 3 1045.174609363079 MULTI CID FTMS 0 0 0 9295 249580.859375 1.0 0 0.0 8 5 MNHTDDMNN 9 -1 69.034 0.0 0.0 2.2045 0.0 0.0 2040.9884176315884 0.0 2040.9884176315884 0.0 19.490405779039108 0.0 0.0 0 0.2614393726401688 0.0 0.5 0.805462187404089 MNHTDDMNN 2.2045 - 20091 1 1.955 113367.7 0.8899999856948853 4874 4427 9295 SUDHL4_400M_050219_1,9303 SUDHL4_400M_050219_1,9303, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9304 50.738 135.0 334760.0 25 0 45742.0 + -1 MLKQKMLKK 9 72 388.5711956343381 1162.691757503214 3 388.5712158083916 MULTI CID FTMS 0 0 0 9295 239082.15625 0.7049000345050143 -1 0.1286430358886718 9 Oxidation (M) _M(Oxidation (M))LKQKMLKK_ REV__ENST00000404330.1_1_6:81083734-81083845:-|nuORF 1.0714618166137932 0.8772799748779447 5 C 1 -1 5.4846 0.0 0.0 0.47171 0.0 0.0 351.33355545418914 705.3374117486936 1056.6709672028828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.47171 - 1 + 1 1.955 45262.7 1.0 4875 4427 9295 SUDHL4_400M_050219_1,9304 SUDHL4_400M_050219_1,9304,MLKQKMLKK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9305 50.742 164.0 253720.0 25 0 31356.0 + 9532 FLFNTENKL 9 67 563.3002384563107 1124.5859239794213 2 563.3005248904228 MULTI CID FTMS 0 0 0 9295 195537.046875 1.0 0 0.0 10 Unmodified _FLFNTENKL_ ENSG00000067064|ENST00000381344|IDI1;nc|ENSG00000067064|Q13907|IDI1 22.736283301280096 0.2418982879461534 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[ET]|[MV]}N{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 9 4 + 25.862 0.0 0.0 2.2997 2.2997 71.454 0.0 0.0 0.0 0.2545373444029053 0.2545373444029053 0.2545373444029053 0.2545373444029053 0 0.0 0.0 0.3252574989159953 0.4247425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[ET]|[MV]}N{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}N{[ET]|[MV]}NK{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T[K{I|L}]N{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}N{[ET]|[MV]}GGK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}GG{[ET]|[MV]}NK{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{[ET]|[MV]}GG{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}R[WD]{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}N[K{I|L}]{[QC]|[C(Carbamidomethyl (C))A]}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T[K{I|L}]GG{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 2.2997;2.2771;1.5397;1.4583;1.4583;1.1032;1.0982;1.0747;0.72086 -;+;-;-;-;-;-;-;- + 82 1 1.955 37570.9 1.0 4876 4427 9295 SUDHL4_400M_050219_1,9305 SUDHL4_400M_050219_1,9305,FLFNTENKL False True FLFNTENKL 50.74154 563.300524890423 1281461.375 9295.0 nc|ENSG00000067064|Q13907|IDI1;;ENSG00000067064|ENST00000381344|IDI1 4.847376743952434 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9306 50.745 158.0 421950.0 25 0 58318.0 + 1621 ALLTGIISKA 10 84 493.8166683200964 0 493.8170654177666 PEAK CID FTMS 0 0 0 9295 196407.1875 1.0 0 0.0 11 Unmodified _ALLTGIISKA_ ENSG00000155561|ENST00000285968|NUP205 28.49450938151212 0.2298535315266205 5 {I|L}T{[VA]|[{I|L}G]}{I|L}S 6 4 18.02 0.0 0.0 1.8283 0.0 0.0 184.1310698199772 214.1200197809204 398.2510896008976 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + {I|L}T{[VA]|[{I|L}G]}{I|L}S 1.8283 + + 202 + 1 1.955 57001.6 1.0 4877 4427 9295 SUDHL4_400M_050219_1,9306 SUDHL4_400M_050219_1,9306,ALLTGIISKA False True ALLTGIISKA 50.744657 493.817065417767 423231.21875 9295.0 ENSG00000155561|ENST00000285968|NUP205 5.23931900660197 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9307 50.748 179.0 274980.0 25 0 40335.0 + + 18830 ALNEEAGRLLL 11 68 599.3799428340543 1196.7453327349083 2 599.3798095583916 MULTI CID FTMS 0 0 0 9295 178057.09375 0.1303601068207449 -1 0.1286430358886718 12 Unmodified _LASGRLVLRRG_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 6.2057823575117 0.8458686499021061 5 NEEA 4 -1 16.938 0.0 0.0 1.4154 0.0 0.0 183.1930523387618 567.3617647760374 750.5548171147991 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NEEA 1.4154 - 28 + 1 1.955 41840.7 1.0 4878 4427 9295 SUDHL4_400M_050219_1,9307 SUDHL4_400M_050219_1,9307,LASGRLVLRRG False False ALNEEAGRLLL 50.748132 599.379809558392 502533.65625 9295.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 5.108645915985107 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9308 50.762 800.0 125630.0 25 0 27219.0 + -1 RRKADRRKRPM 11 102 743.4352543790432 1484.8559558248862 2 743.4358398318291 MULTI CID FTMS 0 0 0 9295 142175.75 0.4560444566823702 -2 0.2558097839355469 13 Oxidation (M) _RRKADRRKRPM(Oxidation (M))_ REV__ENST00000294119.6_1_11:62444064-62444232:-|nuORF 1.1933415558491238 0.8695176722560516 5 V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3 -1 10.017 0.0 0.0 0.67463 0.0 0.0 1094.6648375160955 0.0 1094.6648375160955 0.0 4.532796692927265 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 0.67463 - 18 + 1 1.955 80892.6 0.6700000166893005 4879 4427 9295 SUDHL4_400M_050219_1,9308 SUDHL4_400M_050219_1,9308,RRKADRRKRPM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9309 50.776 800.0 113260.0 25 0 25589.0 + 19392 LERVRREREAK 11 111 721.4221185689704 1440.8296842047407 2 721.4225952029228 MULTI CID FTMS 0 0 0 9295 131131.234375 0.3075218871741474 3 -0.4358749389648437 14 Unmodified _LERVRREREAK_ REV__ENSG00000101333|ENST00000378473|PLCB4;REV__ENST00000464199.5_1_20:9351789-9459633:+|nuORF;REV__nc|ENSG00000101333|Q15147-2|PLCB4;REV__nc|ENSG00000101333|Q15147-4|PLCB4;REV__nc|ENSG00000101333|Q15147-5|PLCB4;REV__nc|ENSG00000101333|Q15147|PLCB4 5.296884461304476 0.8501568894076437 5 {[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}DE 6 -1 29.839 0.0 0.0 2.0709 0.0 0.0 0.0 717.5102011327282 717.5102011327282 18.48917548654445 0.0 0.0 0.0 0 0.0 0.958607314841775 1.174742501084005 0.0 {[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}DE 2.0709 - 201 1 1.955 77875.0 0.6499999761581421 4880 4427 9295 SUDHL4_400M_050219_1,9309 SUDHL4_400M_050219_1,9309,LERVRREREAK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9310 50.791 800.0 94617.0 25 0 11580.0 + 39833 VEYISYLKKQL 11 118 692.400002102926 1382.785451272652 2 692.4021484255791 MULTI CID FTMS 0 0 0 9295 90522.828125 1.0 0 0.0 15 Unmodified _VEYISYLKKQL_ REV__ENSG00000166960|ENST00000383096|CCDC178;REV__nc|ENSG00000166960|Q5BJE1-2|CCDC178;REV__nc|ENSG00000166960|Q5BJE1-3|CCDC178;REV__nc|ENSG00000166960|Q5BJE1-4|CCDC178 2.9952420565917617 0.861016188266951 5 Q 1 -1 12.474 0.0 0.0 0.90211 0.0 0.0 1236.716113359369 0.0 1236.716113359369 0.0 1.7609125905568137 0.0 0.0 0 0.0 0.0 0.0 0.1505149978319906 Q 0.90211 + + 246 + 1 1.955 62061.8 0.5699999928474426 4881 4427 9295 SUDHL4_400M_050219_1,9310 SUDHL4_400M_050219_1,9310,VEYISYLKKQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9311 50.805 800.0 141120.0 25 0 14849.0 -1 0 87 664.6693390624409 1990.9861877875228 3 665.0040161013603 MULTI CID FTMS 0 0 0 9295 76458.8515625 0.589134219356299 -1 0.1286430358886718 16 5 {I|L}H{I|L}Q{[CP]|[EA]} 6 -1 36.031 0.0 0.0 1.8097 0.0 0.0 1281.5730398586566 0.0 1281.5730398586566 0.0 3.0423595621581256 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.0 {I|L}H{I|L}Q{[CP]|[EA]} 1.8097 - 184 1 1.955 96706.8 0.5400000214576721 4882 4427 9295 SUDHL4_400M_050219_1,9311 SUDHL4_400M_050219_1,9311, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9312 50.819 800.0 99987.0 25 0 7470.4 -1 0 77 1057.8514807585311 3170.5326128757933 3 1058.186938464642 MULTI CID FTMS 0 0 0 9295 113430.171875 1.0 0 0.0 17 5 D[WH]VM{[QD]|[EN]|[WG]|[KD]|[RS]} 7 -1 33.244 0.0 0.0 1.0485 0.0 0.0 2241.073703093069 0.0 2241.073703093069 0.0 26.254019516304226 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 D[WH]VM{[QD]|[EN]|[WG]|[KD]|[RS]} 1.0485 - 55 1 1.955 62355.5 0.6100000143051147 4883 4427 9295 SUDHL4_400M_050219_1,9312 SUDHL4_400M_050219_1,9312, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9313 50.825 303.0 95133.0 25 0 22853.0 7639 EKEKKRRRLEN 11 52 495.9586571592416 1484.8541420779247 3 495.9584533572197 MULTI CID FTMS 0 0 0 9295 117541.1875 0.6464847335250566 -2 0.2558097839355469 18 Unmodified _EKEKKRRRLEN_ ENSG00000013374|ENST00000568733|NUB1;nc|ENSG00000013374|Q9Y5A7-2|NUB1 0.0948413911109767 0.8747004676205551 5 C 1 11 5.4846 0.0 0.0 0.36937 0.0 0.0 989.6496875874936 389.1813753717407 1378.8310629592345 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.36937 - 3 + 1 1.955 36167.8 1.0 4884 4427 9295 SUDHL4_400M_050219_1,9313 SUDHL4_400M_050219_1,9313,EKEKKRRRLEN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9315 50.83 49.0 794340.0 25 0 81364.0 + 32164 RVSDINFTL 9 56 532.7897168725991 1063.564880811998 2 532.7906371951103 MULTI CID FTMS 0 0 0 9314 899101.4375 0.2570685886117882 2 -0.3157806396484375 1 Unmodified _RVSDINFTL_ ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3 21.53697664764585 0.2571576504437394 5 [{I|L}T]GW{I|L}N{M(Oxidation (M))|F}[{I|L}T] 9 4 + 34.899 0.0 0.0 3.2813 3.2813 84.407 0.0 0.0 0.0 2.243012119929098 20.29508827839323 2.243012119929098 13.455612550363805 0 0.5 0.0 0.0 0.4247425010840047 [{I|L}T]GW{I|L}N{M(Oxidation (M))|F}[{I|L}T];[{I|L}T]GW{I|L}GG{M(Oxidation (M))|F}[{I|L}T] 3.2813;2.0162 -;- 114 1 1.955 34759.9 1.0 4885 4428 9314 SUDHL4_400M_050219_1,9315 SUDHL4_400M_050219_1,9315,RVSDINFTL False True RVSDINFTL 50.830387 532.79063719511 41032028.0 9314.0 nc|ENSG00000110075|Q5H9R7-6|PPP6R3;;ENSG00000110075|ENST00000393800|PPP6R3;;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;;nc|ENSG00000110075|Q5H9R7-3|PPP6R3;;nc|ENSG00000110075|Q5H9R7-5|PPP6R3 5.4681118329366045 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9316 50.833 132.0 267470.0 25 0 19661.0 + 24203 MAFNHEVP 8 71 472.71741112743854 943.4202693216772 2 472.7177917361259 MULTI CID FTMS 0 0 0 9314 113785.984375 0.4001303199129135 2 -0.3157806396484375 2 Unmodified _MAFNHEVP_ REV__ENSG00000143552|ENST00000368559|NUP210L;REV__nc|ENSG00000143552|Q5VU65-2|NUP210L 5.760428011301431 0.7893668129297577 5 V 1 -1 10.089 0.0 0.0 1.0694 0.0 0.0 826.3408148312459 0.0 826.3408148312459 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0694 + + 15 + 1 1.955 34424.3 1.0 4886 4428 9314 SUDHL4_400M_050219_1,9316 SUDHL4_400M_050219_1,9316,MAFNHEVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9317 50.836 130.0 266940.0 25 0 100150.0 40896 VLRRARLPTVV 11 37 640.4190536706947 1278.8235544081892 2 640.4191772341728 MULTI CID FTMS 0 0 0 9314 468436.65625 1.0 0 0.0 3 Unmodified _VLRRARLPTVV_ ENSG00000166507|ENST00000309979|NDST2;nc|ENSG00000166507|P52849-2|NDST2 0.0 0.8751479354844584 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.955 36189.1 1.0 4887 4428 9314 SUDHL4_400M_050219_1,9317 SUDHL4_400M_050219_1,9317,VLRRARLPTVV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9318 50.841 274.0 162400.0 25 0 51194.0 19830 LHGPRRRRRR 10 62 680.4245942501693 1358.8346355671383 2 680.4251586794853 MULTI CID FTMS 0 0 0 9314 348112.875 0.91794066271032 -1 0.1200942993164062 4 Unmodified _LHGPRRRRRR_ ENST00000372324.5_1_1:44444922-44446927:+|nuORF;ENST00000497866.5_1_1:44444922-44446927:+|nuORF 0.4583401331227399 0.7245164002484112 5 R 1 9 1.2591 0.0 0.0 0.092657 0.0 0.0 988.6118705298323 211.09809290103752 1199.70996343087 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.092657 + + 3 + 1 1.955 47112.7 1.0 4888 4428 9314 SUDHL4_400M_050219_1,9318 SUDHL4_400M_050219_1,9318,LHGPRRRRRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9319 50.844 139.0 520920.0 25 0 88684.0 + 40375 VIAEILRGV 9 67 485.3080235532348 968.6014941732695 2 485.3082458376884 MULTI CID FTMS 0 0 0 9314 288649.59375 0.147901830374193 -1 0.1200942993164062 5 Unmodified _VIAEILRGV_ ENSG00000101361|ENST00000329276|NOP56 39.94969957227396 0.0757326808254658 5 V{I|L}AE{I|L}{I|L}{[NV]|[RG]}V 9 0 + 77.936 0.0 0.0 8.0462 8.0462 97.501 0.0 0.0 0.0 65.92937589502075 3.42261388523842 3.42261388523842 26.36500636031869 0 1.1861818737241734 2.0 0.0 0.4247425010840047 + + V{I|L}AE{I|L}{I|L}{[NV]|[RG]}V;V{I|L}V[DV]{I|L}{[NV]|[RG]}V 8.0462;5.3243 +;- + 155 + 1 1.955 60683.9 1.0 4889 4428 9314 SUDHL4_400M_050219_1,9319 SUDHL4_400M_050219_1,9319,VIAEILRGV True True VIAEILRGV 50.843598 485.308245837688 25583446.0 9314.0 ENSG00000101361|ENST00000329276|NOP56 5.422421773274739 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9320 50.85 337.0 217230.0 25 0 60070.0 + 8787 AMFDQSQIQEF 11 90 671.9112636791299 1341.8079744250597 2 671.9117919802666 MULTI CID FTMS 0 0 0 9314 287525.46875 0.8304370645386496 -1 0.1200942993164062 6 Unmodified _EVVLKIKPNRF_ nc|ENSG00000101335|P24844-2|MYL9;ENST00000577510.5_1_18:3252320-3253446:+|nuORF;ENSG00000101608|ENST00000217652|MYL12A;ENSG00000101335|ENST00000279022|MYL9;ENST00000580353.1_1_18:3247898-3253446:+|nuORF;ENSG00000118680|ENST00000237500|MYL12B 1.214830529360525 0.8694162858786273 5 {M(Oxidation (M))|F} 1 10 13.495 0.0 0.0 1.0057 0.0 0.0 1176.728443640683 0.0 1176.728443640683 0.0 3.817139967814685 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0057 + + 48 + 1 1.955 69702.2 1.0 4890 4428 9314 SUDHL4_400M_050219_1,9320 SUDHL4_400M_050219_1,9320,EVVLKIKPNRF False False AMFDQSQIQEF 50.849712 671.911791980267 499711.9375 9314.0 nc|ENSG00000101335|P24844-2|MYL9;;ENST00000577510.5_1_18:3252320-3253446:+|nuORF;;ENSG00000101608|ENST00000217652|MYL12A;;ENSG00000101335|ENST00000279022|MYL9;;ENST00000580353.1_1_18:3247898-3253446:+|nuORF;;ENSG00000118680|ENST00000237500|MYL12B 4.994171142578125 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9321 50.855 293.0 206010.0 25 0 76544.0 13455 HLRTFRQVLR 10 78 663.3976020044986 1324.780651075797 2 663.3989745974541 MULTI CID FTMS 0 0 0 9314 290175.84375 0.8875099509575142 -1 0.1200942993164062 7 Unmodified _HLRTFRQVLR_ ENSG00000189050|ENST00000305783|RNFT1;ENST00000486103.6_1_17:58031378-58035783:-|nuORF 1.844237919475145 0.7181058121064529 5 {I|L} 1 9 10.379 0.0 0.0 0.78342 0.0 0.0 1193.6854342562642 0.0 1193.6854342562642 0.0 6.399203482970215 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.78342 + + 5 + 1 1.955 63660.6 1.0 4891 4428 9314 SUDHL4_400M_050219_1,9321 SUDHL4_400M_050219_1,9321,HLRTFRQVLR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9322 50.86 285.0 162390.0 25 0 44491.0 -1 VMKMKKRVRRR 11 71 760.4613685033667 1518.9081840735332 2 760.4615966677666 MULTI CID FTMS 0 0 0 9314 277027.75 0.9649126549811892 -1 0.1200942993164062 8 2 Oxidation (M) _VM(Oxidation (M))KM(Oxidation (M))KKRVRRR_ ENST00000295321.8_1_2:128262310-128262487:-|nuORF 0.3070304955306653 0.8736993455979228 5 {I|L} 1 -1 6.9897 0.0 0.0 0.46018 0.0 0.0 908.6088809502896 494.18894373111567 1402.7978246814052 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.46018 - 8 + 1 1.955 46093.0 1.0 4892 4428 9314 SUDHL4_400M_050219_1,9322 SUDHL4_400M_050219_1,9322,VMKMKKRVRRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9323 50.864 215.0 233940.0 25 0 80731.0 29576 QLRKLHRRR 9 45 631.9060890066344 1261.7976250800689 2 631.9058105349541 MULTI CID FTMS 0 0 0 9314 276908.1875 1.0 0 0.0 9 Unmodified _QLRKLHRRR_ ENST00000297293.5_1_7:97832983-97833265:+|nuORF 0.6014990680409731 0.8936861360942873 5 VN 2 9 3.1876 0.0 0.0 0.25262 0.0 0.0 949.5806889001844 96.0824984186156 1045.6631873187998 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VN 0.25262 - 5 + 1 1.955 45602.4 1.0 4893 4428 9314 SUDHL4_400M_050219_1,9323 SUDHL4_400M_050219_1,9323,QLRKLHRRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9324 50.868 158.0 171220.0 25 0 13211.0 42610 VTSFKETI 8 62 462.7554802740095 923.4964076148192 2 462.7554809451103 MULTI CID FTMS 0 0 0 9314 277320.15625 0.5136516789938123 -1 0.1200942993164062 10 Unmodified _VTSFKETI_ ENSG00000166266|ENST00000393094|CUL5 14.581692164780916 0.6954967302934248 5 {[TV]|[{I|L}S]}C(Carbamidomethyl (C)) 3 6 16.4 0.0 0.0 1.7758 0.0 0.0 0.0 560.3303364080409 560.3303364080409 2.230749808046328 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[TV]|[{I|L}S]}C(Carbamidomethyl (C)) 1.7758 - 24 1 1.955 27216.9 1.0 4894 4428 9314 SUDHL4_400M_050219_1,9324 SUDHL4_400M_050219_1,9324,VTSFKETI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9325 50.874 331.0 151010.0 25 0 19618.0 + 5269 DKRILRLLDLY 11 74 709.4274248514153 1416.8402967696304 2 709.4274169802666 MULTI CID FTMS 0 0 0 9314 194356.390625 1.0 0 0.0 11 Unmodified _DKRILRLLDLY_ REV__ENSG00000168306|ENST00000302819|ACOX2;REV__ENST00000467738.1_1_3:58490953-58512473:-|nuORF 1.3295316138638542 0.8688751186870782 5 N 1 -1 5.4846 0.0 0.0 0.3871 0.0 0.0 674.4384830834364 625.3523158472001 1299.7907989306364 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.3871 - 5 + 1 1.955 47389.0 1.0 4895 4428 9314 SUDHL4_400M_050219_1,9325 SUDHL4_400M_050219_1,9325,DKRILRLLDLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9326 50.876 131.0 327930.0 25 0 20822.0 + 33627 SIRLNRSV 8 82 472.78552532104857 943.5564977088972 2 472.7857849001884 MULTI CID FTMS 0 0 0 9314 168322.140625 1.0 0 0.0 12 Unmodified _SIRLNRSV_ REV__ENST00000396161.9_2_19:58133856-58133982:+|nuORF 9.347437153973935 0.7675937258251505 5 V 1 -1 12.474 0.0 0.0 1.322 0.0 0.0 826.4770127008878 0.0 826.4770127008878 0.0 10.880456295278409 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.322 + + 23 + 1 1.955 40553.4 1.0 4896 4428 9314 SUDHL4_400M_050219_1,9326 SUDHL4_400M_050219_1,9326,SIRLNRSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9327 50.891 800.0 125610.0 25 0 11593.0 14300 IEKQVALLKAL 11 122 613.3949821255138 1224.7754113178275 2 613.3957397341728 MULTI CID FTMS 0 0 0 9314 158701.453125 1.0 0 0.0 13 Unmodified _IEKQVALLKAL_ ENSG00000006128|ENST00000319273|TAC1;ENST00000491437.1_1_7:97363537-97369229:+|nuORF;nc|ENSG00000006128|P20366-2|TAC1 2.498486711656943 0.8633599123570009 5 {I|L} 1 10 10.837 0.0 0.0 0.88485 0.0 0.0 1093.680240274662 0.0 1093.680240274662 0.0 1.3735052847081608 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.88485 + + 56 + 1 1.955 75944.4 0.7400000095367432 4897 4428 9314 SUDHL4_400M_050219_1,9327 SUDHL4_400M_050219_1,9327,IEKQVALLKAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9328 50.895 209.0 280600.0 25 0 38605.0 -1 0 80 887.366096722939 1772.717640512678 2 887.3664428591728 MULTI CID FTMS 0 0 0 9314 134349.671875 0.4857290749986188 -1 0.1200942993164062 14 5 {[QD]|[EN]|[WG]|[KD]|[RS]}M{M(Oxidation (M))|F}{M(Oxidation (M))|F}ANQ{[ET]|[MV]}WWGN 14 -1 {[QD]|[EN]|[WG]|[KD]|[RS]}M + + 58.422 9.1812 2.4539 3.2956 3.2956 54.708 0.0 0.0 0.0 0.0 20.842018425061305 0.0 0.0 0 0.4247425010840047 0.0 0.5 1.25 {[QD]|[EN]|[WG]|[KD]|[RS]}M{M(Oxidation (M))|F}{M(Oxidation (M))|F}ANQ{[ET]|[MV]}WWGN 3.2956 - 1197 + 1 1.955 45114.1 1.0 4898 4428 9314 SUDHL4_400M_050219_1,9328 SUDHL4_400M_050219_1,9328, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9329 50.907 655.0 172400.0 25 0 18426.0 + 11753 GLISAQQKL 9 140 479.29138923126334 956.5682255293268 2 479.2926513552666 MULTI CID FTMS 0 0 0 9314 156243.390625 0.234588612230485 2 -0.3157806396484375 15 Unmodified _GLISAQQKL_ REV__ENSG00000122435|ENST00000370141|TRMT13 25.399314129420983 0.2080152500878129 5 {[VA]|[{I|L}G]}{I|L}DP 5 -1 37.747 0.0 0.0 3.9461 0.0 0.0 0.0 458.2625211525378 458.2625211525378 15.69599075987611 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}{I|L}DP 3.9461 - 368 + 1 1.955 90365.9 1.0 4899 4428 9314 SUDHL4_400M_050219_1,9329 SUDHL4_400M_050219_1,9329,GLISAQQKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9330 50.919 717.0 166870.0 25 0 30022.0 + 24104 LYKAYKEKVAI 11 138 442.6010144067032 1324.7812138203096 3 442.6009094119072 MULTI CID FTMS 0 0 0 9314 125764.1171875 0.5721801590792231 -1 0.1200942993164062 16 Unmodified _LYKAYKEKVAI_ REV__ENSG00000083845|ENST00000196551|RPS5;REV__ENST00000598807.1_1_19:58899504-58905010:+|nuORF 3.5964929083625545 0.858179447565866 5 {I|L} 1 -1 11.783 0.0 0.0 0.88941 0.0 0.0 1193.6861495886674 0.0 1193.6861495886674 0.0 1.861211560201653 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.88941 + + 80 + 1 1.955 111930.3 1.0 4900 4428 9314 SUDHL4_400M_050219_1,9330 SUDHL4_400M_050219_1,9330,LYKAYKEKVAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9331 50.926 316.0 453500.0 25 0 47135.0 + 44426 YMIAHITGL 9 123 509.7730650857413 1017.5315772382828 2 509.7727844119072 MULTI CID FTMS 0 0 0 9314 124902.3359375 0.24817074670007 -1 0.1200942993164062 17 Unmodified _YMIAHITGL_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 89.42679046578446 0.015225546354407 5 YM{I|L}AH{I|L}TG{I|L} 9 0 + 80.404 0.0 0.0 7.9019 7.9019 97.659 0.0 0.0 0.0 27.220938031831565 14.09256854528806 14.09256854528806 40.92986265876426 0 1.4604093769761874 1.6989700043360187 0.6237125054200234 0.0 + + YM{I|L}AH{I|L}TG{I|L};Y[YV]GT{I|L}R{M(Oxidation (M))|F};Y[YR]T{I|L}R{M(Oxidation (M))|F};Y[YV]G{I|L}TR{M(Oxidation (M))|F};Y[YR]{I|L}TR{M(Oxidation (M))|F};Y[YV]AS{I|L}R{M(Oxidation (M))|F};Y[YV]{I|L}GTR{M(Oxidation (M))|F};Y[YV]AVTR{M(Oxidation (M))|F};Y[YV]{I|L}ASR{M(Oxidation (M))|F};Y[YV]G{I|L}AH[VP] 7.9019;3.8794;3.5842;3.5715;3.2763;2.6484;2.5411;2.3405;2.1621;2.1248 +;-;-;-;-;-;-;-;-;- + 782 + 1 1.955 110905.2 1.0 4901 4428 9314 SUDHL4_400M_050219_1,9331 SUDHL4_400M_050219_1,9331,YMIAHITGL True True YMIAHITGL 50.926018 509.772784411907 3241769.75 9314.0 ENSG00000176890|ENST00000323274|TYMS;;nc|ENSG00000176890|P04818-3|TYMS;;chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;;nc|ENSG00000176890|P04818-2|TYMS;;ENST00000581920.1_1_18:667730-672994:+|nuORF 7.268994331359863 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9332 50.94 800.0 104570.0 25 0 8237.9 -1 SIQRKLRRACL 11 111 700.914499642092 1399.814446350984 2 700.9145995974541 MULTI CID FTMS 0 0 0 9314 121824.203125 1.0 0 0.0 18 Carbamidomethyl (C) _SIQRKLRRAC(Carbamidomethyl (C))L_ ENSG00000168016|ENST00000645898|TRANK1;nc|ENSG00000168016|O15050|TRANK1 2.735195868890462 0.8622431031272658 5 [{I|L}V]NE{I|L}D 6 -1 16.71 0.0 0.0 1.1937 0.0 0.0 0.0 713.4454027320963 713.4454027320963 5.450441137228779 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.6989700043360187 0.0 [{I|L}V]NE{I|L}D 1.1937 - 518 1 1.955 66832.9 0.550000011920929 4902 4428 9314 SUDHL4_400M_050219_1,9332 SUDHL4_400M_050219_1,9332,SIQRKLRRACL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9333 50.948 475.0 152260.0 25 0 9360.6 + + 30709 VLQYVVPEV 9 116 522.7960213660865 1043.577489798973 2 523.3000976443291 MULTI CID FTMS 0 0 0 9314 105445.3125 0.5170387184886794 -3 0.3759040832519531 19 Unmodified _RGDLIQVML_ ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A 16.942295170755138 0.3780752226737986 5 {[QV]|[N{I|L}]|[RA]|[KV]}YV{I|L}{I|L}[Y{M(Oxidation (M))|F}] 8 -1 + 32.668 0.0 0.0 3.1304 3.1304 72.936 0.0 0.0 0.0 1.8562819952934009 6.989700043360188 1.8562819952934009 0.4845500650402812 0 0.0 1.3010299956639813 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}YV{I|L}{I|L}[Y{M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}YV{I|L}[Y{M(Oxidation (M))|F}];[{I|L}V]QYV{I|L}[Y{M(Oxidation (M))|F}];{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}V{I|L}[Y{M(Oxidation (M))|F}];[YV]QV{I|L}{I|L}[Y{M(Oxidation (M))|F}];[YV]VQ{I|L}{I|L}[Y{M(Oxidation (M))|F}];[YV]Q{I|L}V{I|L}[Y{M(Oxidation (M))|F}];[{I|L}T]{M(Oxidation (M))|F}Q{I|L}{I|L}[Y{M(Oxidation (M))|F}];[{I|L}V][AG]YV{I|L}[Y{M(Oxidation (M))|F}];[YQ]VV{I|L}{I|L}[Y{M(Oxidation (M))|F}] 3.1304;3.084;2.9526;2.9153;2.7467;2.627;2.5316;2.3946;2.065;2.0238 -;-;-;-;-;-;-;-;-;- 534 1 1.955 61705.1 1.0 4903 4428 9314 SUDHL4_400M_050219_1,9333 SUDHL4_400M_050219_1,9333,RGDLIQVML False False VLQYVVPEV 50.948266 523.300097644329 1189462.8125 9314.0 ENSG00000107581|ENST00000369144|EIF3A;;nc|ENSG00000107581|Q14152-2|EIF3A 4.644716262817383 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9334 50.962 800.0 91171.0 25 0 5359.6 + -1 IVNRCKKLAT 10 101 601.8578333510135 1201.7011137688269 2 601.8582641482353 MULTI CID FTMS 0 0 0 9314 96435.796875 1.0 0 0.0 20 Carbamidomethyl (C) _IVNRC(Carbamidomethyl (C))KKLAT_ REV__ENST00000454679.6_2_10:19569053-19613005:+|nuORF 3.5964929083625545 0.7100006075494749 5 T 1 -1 13.452 0.0 0.0 1.1194 0.0 0.0 1082.642045020583 0.0 1082.642045020583 0.0 1.6691125453014433 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 T 1.1194 + + 29 + 1 1.955 57358.8 0.4900000095367431 4904 4428 9314 SUDHL4_400M_050219_1,9334 SUDHL4_400M_050219_1,9334,IVNRCKKLAT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9336 50.969 159.0 326970.0 25 0 33861.0 + 40996 VMAPRTLLL 9 78 507.31237334472144 1012.6101937562428 2 507.3126403689384 MULTI CID FTMS 0 0 0 9335 350377.3125 0.0653358009575559 4 -0.6227264404296875 1 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 32.78568957990786 0.1150597335874693 5 VMA 3 6 55.445 0.0 0.0 5.4755 0.0 0.0 0.0 708.442911631791 708.442911631791 31.223637474483468 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VMA 5.4755 + + 65 + 1 1.955 45204.7 1.0 4905 4429 9335 SUDHL4_400M_050219_1,9336 SUDHL4_400M_050219_1,9336,VMAPRTLLL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9337 50.972 134.0 451030.0 25 0 32878.0 + 25435 NEFPEPIKL 9 82 543.7948049884227 1085.5750570436453 2 543.7955810427666 MULTI CID FTMS 0 0 0 9335 374151.5625 0.4502949801917371 1 -0.17889404296875 2 Unmodified _NEFPEPIKL_ ENSG00000075785|ENST00000265062|RAB7A 36.506200033944 0.094635877243972 5 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}PE[{I|L}P]K{I|L} 9 0 + 39.159 0.0 0.0 3.6072 3.6072 81.239 0.0 0.0 0.0 17.902980024041966 3.1336373073770645 3.1336373073770645 8.168242628472136 0 1.0 0.0 0.3807196863200844 0.0 + + {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}PE[{I|L}P]K{I|L};[{I|L}P]K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PWW 3.6072;2.8548 +;- + 107 + 1 1.955 55264.8 1.0 4906 4429 9335 SUDHL4_400M_050219_1,9337 SUDHL4_400M_050219_1,9337,NEFPEPIKL True True NEFPEPIKL 50.971828 543.795581042767 15569118.0 9335.0 ENSG00000075785|ENST00000265062|RAB7A 6.353643258412679 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9338 50.973 52.0 787650.0 25 0 190420.0 + 44386 YLTNEGIQYL 10 60 607.3083257003669 1212.6020984675338 2 607.3088256716728 MULTI CID FTMS 0 0 0 9335 1216523.0 1.0 0 0.0 3 Unmodified _YLTNEGIQYL_ chr6:34425221-34425583|48|67.1|0.0|22.68|-|ENST00000494077|RPS10-NUDT3,RPS10;ENSG00000124614|ENST00000648437|RPS10;ENST00000408001.1_1_6:34712123-34712447:+|nuORF;ENST00000439253.1_1_9:90631298-90631598:+|nuORF;ENST00000440748.1_1_7:37415149-37415623:+|nuORF;ENST00000480942.1_1_6:34392413-34392935:-|nuORF 53.832793166522166 0.0576554960245129 5 [Y{I|L}]Q{[ES]|[DT]|[{I|L}C]}G{I|L}Q[Y{I|L}] 10 2 + 60.168 0.0 0.0 4.9619 4.9619 86.14 0.0 0.0 0.0 13.29058719264225 5.764837301042718 5.764837301042718 9.164539485499256 0 0.5 1.6989700043360187 0.805462187404089 1.0 [Y{I|L}]Q{[ES]|[DT]|[{I|L}C]}G{I|L}Q[Y{I|L}];[Y{I|L}]Q{[ES]|[DT]|[{I|L}C]}G{I|L}[AG][Y{I|L}];{[QD]|[EN]|[WG]|[KD]|[RS]}GT{I|L}Y{I|L}Q[Y{I|L}];[Y{I|L}][AG]{[ES]|[DT]|[{I|L}C]}G{I|L}Q[Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{I|L}G{[ES]|[DT]|[{I|L}C]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GT{I|L}Y{I|L}[AG][Y{I|L}];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{I|L};[Y{I|L}]Q{[ES]|[DT]|[{I|L}C]}[KP][WY];{[QD]|[EN]|[WG]|[KD]|[RS]}GT{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Q[RH];{[QD]|[EN]|[WG]|[KD]|[RS]}GT{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[AG][RH] 4.9619;4.2061;3.8658;3.7938;3.1484;3.1101;2.6097;1.8656;1.5964;0.84067 -;-;-;-;-;-;-;-;-;- 171 1 1.955 38731.3 1.0 4907 4429 9335 SUDHL4_400M_050219_1,9338 SUDHL4_400M_050219_1,9338,YLTNEGIQYL True True YLTNEGIQYL 50.973188 607.308825671673 16488126.0 9335.0 ENST00000480942.1_1_6:34392413-34392935:-|nuORF;;ENST00000408001.1_1_6:34712123-34712447:+|nuORF;;ENST00000439253.1_1_9:90631298-90631598:+|nuORF;;ENST00000440748.1_1_7:37415149-37415623:+|nuORF;;ENSG00000124614|ENST00000648437|RPS10;;chr6:34425221-34425583|48|67.1|0.0|22.68|-|ENST00000494077|RPS10-NUDT3,RPS10 6.445954481760661 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9339 50.975 83.0 855570.0 25 0 51947.0 -1 0 80 1029.8300374569812 3086.468282971144 3 1030.166674792767 MULTI CID FTMS 0 0 0 9335 1144324.25 1.0 0 0.0 4 5 [MN]MVN 5 -1 50.713 0.0 0.0 1.6431 0.0 0.0 0.0 2494.154629574792 2494.154629574792 34.51544993495972 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [MN]MVN 1.6431 - 327 + 1 1.955 57337.1 1.0 4908 4429 9335 SUDHL4_400M_050219_1,9339 SUDHL4_400M_050219_1,9339, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9340 50.978 117.0 575340.0 25 0 93884.0 + 1452 ALESFLKQV 9 101 517.7970160324312 1033.5794791316623 2 517.7980834841728 MULTI CID FTMS 0 0 0 9335 419900.8125 1.0 0 0.0 5 Unmodified _ALESFLKQV_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 56.17704186161178 0.0281986971544335 5 [{I|L}A]EYA{I|L}KQV 9 2 + 62.162 0.0 0.0 6.0143 6.0143 85.265 0.0 0.0 0.0 13.469100130080562 13.469100130080562 13.469100130080562 3.99166239860314 0 1.548455006504028 2.0 0.0 1.0356668758921828 [{I|L}A]EYA{I|L}KQV;[{I|L}A]E[KP]{I|L}QHV;[{I|L}A]E[KP]{I|L}HQV;[{I|L}A]EYA{I|L}K[AG]V;[{I|L}A]EY[KQ][{I|L}A]V;[{I|L}A][{M(Oxidation (M))|F}V]{[ET]|[MV]}KQV;[{I|L}A]E[KP]{I|L}[AG]HV;[{I|L}A]Y[KQ]E[{I|L}A]V;[{I|L}A]YE[KQ][{I|L}A]V;[{I|L}A]E[KP]{I|L}H[AG]V 6.0143;5.6281;5.462;4.8278;4.7111;4.5642;4.4416;4.3743;4.2274;3.98 -;-;-;-;-;-;-;-;-;- 486 + 1 1.955 56329.3 1.0 4909 4429 9335 SUDHL4_400M_050219_1,9340 SUDHL4_400M_050219_1,9340,ALESFLKQV True True ALESFLKQV 50.977545 517.798083484173 2558845.5 9335.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 4.939702192942302 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9341 50.991 800.0 376920.0 25 0 11466.0 -1 0 191 1010.8115655704154 3029.412867311446 3 1011.146899402142 MULTI CID FTMS 0 0 0 9335 295175.96875 0.537630052815707 -1 0.1368865966796875 6 5 [MN]PN{I|L}M{M(Oxidation (M))|F}PN{I|L}NWNQS{I|L}{I|L}{[RE]|[WV]}D[PS]Q 23 -1 124.66 0.0 0.0 4.115 0.0 0.0 0.0 287.10041223697505 287.10041223697505 92.55814265154186 0.0 0.0 0.0 0 2.6610892374447825 2.0 1.5669015600442575 2.834121882396211 [MN]PN{I|L}M{M(Oxidation (M))|F}PN{I|L}NWNQS{I|L}{I|L}{[RE]|[WV]}D[PS]Q 4.115 - 371393 + 1 1.955 196305.6 0.9200000166893004 4910 4429 9335 SUDHL4_400M_050219_1,9341 SUDHL4_400M_050219_1,9341, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9342 50.995 205.0 390960.0 25 0 25431.0 + 34087 AMLPSITNV 9 115 473.2651770480877 944.5158011629752 2 473.2654907107353 MULTI CID FTMS 0 0 0 9335 341169.5 1.0 0 0.0 7 Unmodified _SLLGGDVVSV_ nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 37.97399986684836 0.1789611706409123 5 {[TV]|[{I|L}S]}PTDK{[RE]|[WV]} 8 6 + 51.432 0.0 0.0 5.4453 5.4453 84.504 0.0 0.0 0.0 17.659167939666318 26.351766977243702 17.659167939666318 4.798187706630159 0 0.0 1.6989700043360187 1.3807196863200843 0.0 {[TV]|[{I|L}S]}PTDK{[RE]|[WV]};{[TV]|[{I|L}S]}PTGSV{[RE]|[WV]};{[TV]|[{I|L}S]}PT[QP][R{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}PASSV{[RE]|[WV]};{[TV]|[{I|L}S]}PTG[PA][R{M(Oxidation (M))|F}];[PS]{I|L}TDK{[RE]|[WV]};{[TV]|[{I|L}S]}P[SG]TV{[RE]|[WV]};[DV]QVTV{[RE]|[WV]};[PS]{I|L}TGSV{[RE]|[WV]};[DV][{I|L}A]DK{[RE]|[WV]} 5.4453;4.9373;3.7546;3.4755;3.3817;3.3768;3.1864;2.9164;2.8688;2.8469 -;-;-;-;-;-;-;-;-;- 918 1 1.955 66789.7 1.0 4911 4429 9335 SUDHL4_400M_050219_1,9342 SUDHL4_400M_050219_1,9342,SLLGGDVVSV False True AMLPSITNV 50.995297 473.265490710735 334146.46875 9335.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 5.43466059366862 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9343 51.009 800.0 128210.0 25 0 32110.0 19022 LDLFRWQLKKR 11 94 751.9486844538516 1501.882815974503 2 751.9490234255791 MULTI CID FTMS 0 0 0 9335 227610.390625 1.0 0 0.0 8 Unmodified _LDLFRWQLKKR_ ENST00000459737.5_1_14:56114792-56114831:+|nuORF 0.3070304955306653 0.8736993455979228 5 {I|L} 1 10 6.9897 0.0 0.0 0.4654 0.0 0.0 750.5072799411031 635.2668551080686 1385.7741350491715 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.4654 + + 16 + 1 1.955 88515.1 0.800000011920929 4912 4429 9335 SUDHL4_400M_050219_1,9343 SUDHL4_400M_050219_1,9343,LDLFRWQLKKR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9344 51.014 263.0 341480.0 25 0 49711.0 -1 CLCPKDKK 8 105 524.7671095716391 1047.5196662100782 2 524.7679321169853 MULTI CID FTMS 0 0 0 9335 208260.9375 1.0 0 0.0 9 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))PKDKK_ ENST00000438023.5_2_9:6757745-6757892:+|nuORF 16.942295170755138 0.6606234159769251 5 {M(Oxidation (M))|F}{I|L}SKVGK 7 -1 54.8 0.0 0.0 5.2314 0.0 0.0 270.0449480477719 0.0 270.0449480477719 0.0 31.879938467179727 0.0 0.0 0 1.2302046884880935 0.0 0.805462187404089 0.1747425010840047 {M(Oxidation (M))|F}{I|L}SKVGK 5.2314 - 276 + 1 1.955 71751.1 1.0 4913 4429 9335 SUDHL4_400M_050219_1,9344 SUDHL4_400M_050219_1,9344,CLCPKDKK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9345 51.023 530.0 617780.0 25 0 132390.0 + 20380 LLGPRLVLA 9 139 476.3210213870838 950.6274898409677 2 476.3216735720634 MULTI CID FTMS 0 0 0 9335 203048.9375 0.0152803863982552 -2 0.2569808959960937 10 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 61.357469665136826 0.0253304979873734 5 {I|L}{I|L}GPRV{I|L}{I|L}A 9 2 + 55.062 0.0 0.0 5.7922 5.7922 86.026 0.0 0.0 0.0 7.270527770066202 30.113708949271263 7.270527770066202 5.752574989159953 0 1.4291746928241125 2.0 0.0 0.2742275032520141 {I|L}{I|L}GPRV{I|L}{I|L}A;{I|L}{I|L}GPR{I|L}V{I|L}A;[{I|L}V]APRV{I|L}{I|L}A;[{I|L}V]APR{I|L}V{I|L}A;[{I|L}V]P{[NV]|[RG]}{I|L}{I|L}{I|L}A;[{I|L}V]PARV{I|L}{I|L}A;[{I|L}V]PAR{I|L}V{I|L}A;[{I|L}V]P[R{I|L}]G{I|L}{I|L}A;[{I|L}V]P[R{I|L}]AV{I|L}A 5.7922;5.1871;3.8753;3.2702;3.2684;2.9577;2.3525;2.2446;1.6395 -;+;-;-;-;-;-;-;- + 259 1 1.955 246457.1 1.0 4914 4429 9335 SUDHL4_400M_050219_1,9345 SUDHL4_400M_050219_1,9345,LLGPRLVLA True True LLGPRLVLA 51.023345 476.321673572063 259493472.0 9335.0 ENSG00000170348|ENST00000303575|TMED10 3.766377846399943 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9346 51.025 81.0 696400.0 25 0 87200.0 19871 LHMDSDDEI 9 93 537.7237016257426 1073.432850318285 2 537.7252685427666 MULTI CID FTMS 0 0 0 9335 147665.8125 0.2574226346625432 -1 0.1368865966796875 11 Unmodified _LHMDSDDEI_ ENSG00000104218|ENST00000678616|CSPP1;ENST00000521168.5_1_8:68070723-68107652:+|nuORF;nc|ENSG00000104218|Q1MSJ5-1|CSPP1;nc|ENSG00000104218|Q1MSJ5-2|CSPP1;nc|ENSG00000104218|Q1MSJ5|CSPP1 8.593279151180031 0.6146971463335029 5 [H{I|L}]DM{I|L}K 6 6 41.26 0.0 0.0 3.8437 0.0 0.0 0.0 333.0039312111164 333.0039312111164 19.84372668509903 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [H{I|L}]DM{I|L}K 3.8437 - 452 1 1.955 50750.0 1.0 4915 4429 9335 SUDHL4_400M_050219_1,9346 SUDHL4_400M_050219_1,9346,LHMDSDDEI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9347 51.031 232.0 252590.0 25 0 27152.0 + + -1 RQGTPLIAF 9 103 501.76626768890816 1001.5179824446165 2 501.7666198611259 MULTI CID FTMS 0 0 0 9335 141373.546875 0.0870815720179317 4 -0.6227264404296875 12 Carbamidomethyl (C) _LVKC(Carbamidomethyl (C))VDAPT_ ENSG00000167721|ENST00000301364|TSR1 8.593279151180031 0.6146971463335029 5 {I|L}A{M(Oxidation (M))|F} 3 -1 23.188 0.0 0.0 2.3152 0.0 0.0 652.3669888414382 0.0 652.3669888414382 0.0 9.208187539523747 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}A{M(Oxidation (M))|F} 2.3152 - 36 1 1.955 53237.4 1.0 4916 4429 9335 SUDHL4_400M_050219_1,9347 SUDHL4_400M_050219_1,9347,LVKCVDAPT False False RQGTPLIAF 51.030718 501.766619861126 691255.9375 9335.0 ENSG00000167721|ENST00000301364|TSR1 3.2999963760375977 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9348 51.045 800.0 137150.0 25 0 12202.0 + 38563 TSVPSLTSI 9 161 452.7530356263569 0 452.7529785037041 PEAK CID FTMS 0 0 0 9335 134309.609375 1.0 0 0.0 13 Unmodified _TSVPSLTSI_ REV__ENSG00000138658|ENST00000505019|ZGRF1;REV__nc|ENSG00000138658|Q86YA3-4|ZGRF1 39.957323273325 0.0619271662220897 5 S{I|L}SS 4 -1 20.962 0.0 0.0 2.3201 0.0 0.0 250.1522371689262 276.13547693424067 526.2877141031669 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9559771852360796 0.0 S{I|L}SS 2.3201 - 225 + 1 1.955 88941.5 0.4799999892711639 4917 4429 9335 SUDHL4_400M_050219_1,9348 SUDHL4_400M_050219_1,9348,TSVPSLTSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9349 51.058 800.0 216210.0 25 0 26487.0 + -1 LTNMEPEL 8 150 481.7288891150331 961.4432252968662 2 481.7292968630791 MULTI CID FTMS 0 0 0 9335 126062.7265625 1.0 0 0.0 14 Oxidation (M) _LTNM(Oxidation (M))EPEL_ REV__ENSG00000173898|ENST00000533211|SPTBN2;REV__nc|ENSG00000173898|O15020-2|SPTBN2 19.256988751693697 0.6264283240490721 5 {I|L}T 2 -1 29.654 0.0 0.0 3.0843 0.0 0.0 0.0 744.2894412955978 744.2894412955978 13.62370702637646 0.0 0.0 0.0 0 0.0 0.638272163982407 0.3807196863200844 0.0 {I|L}T 3.0843 + + 207 + 1 1.955 135607.6 0.4799999892711639 4918 4429 9335 SUDHL4_400M_050219_1,9349 SUDHL4_400M_050219_1,9349,LTNMEPEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9350 51.072 800.0 133590.0 25 0 10999.0 + 10987 GARNKGAG 8 145 365.70197642797456 729.3893999227491 2 365.7027160525322 MULTI CID FTMS 0 0 0 9335 121691.2265625 1.0 0 0.0 15 Unmodified _GARNKGAG_ REV__ENSG00000115266|ENST00000590469|APC2;REV__nc|ENSG00000115266|O95996-2|APC2;REV__nc|ENSG00000115266|O95996-3|APC2 0.7936320650641473 0.8195151834710337 5 {I|L} 1 -1 13.979 0.0 0.0 1.9166 0.0 0.0 598.294350949896 0.0 598.294350949896 0.0 6.120074056864322 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.9166 - 32 + 1 1.955 88811.0 0.4300000071525574 4919 4429 9335 SUDHL4_400M_050219_1,9350 SUDHL4_400M_050219_1,9350,GARNKGAG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9351 51.087 800.0 69188.0 25 0 14296.0 -1 KRKKRLQLKPM 11 84 721.4629630321934 1440.9113731311868 2 721.4637939333916 MULTI CID FTMS 0 0 0 9335 111209.203125 0.8689136487190114 1 -0.17889404296875 16 Oxidation (M) _KRKKRLQLKPM(Oxidation (M))_ ENST00000222747.7_1_7:120497939-120498116:-|nuORF 0.3506318815782774 0.8734936314171269 5 {I|L} 1 -1 11.109 0.0 0.0 0.77099 0.0 0.0 1309.8163546759115 0.0 1309.8163546759115 0.0 8.634993639681312 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.77099 + + 83 + 1 1.955 47188.6 0.4699999988079071 4920 4429 9335 SUDHL4_400M_050219_1,9351 SUDHL4_400M_050219_1,9351,KRKKRLQLKPM False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9352 51.101 800.0 150580.0 25 0 10052.0 40486 VIQQAEEKL 9 165 529.2964130234678 1056.5782731137356 2 530.2960082888603 MULTI CID FTMS 0 0 0 9335 107566.8984375 0.9255259058345476 6 -0.7855796813964844 17 Unmodified _VIQQAEEKL_ ENSG00000099260|ENST00000263174|PALMD;nc|ENSG00000099260|Q9NP74-2|PALMD;nc|ENSG00000099260|Q9NP74-3|PALMD 16.942295170755138 0.3780752226737986 5 [{I|L}V]NC(Carbamidomethyl (C))V 5 7 17.369 0.0 0.0 1.6439 0.0 0.0 0.0 468.2647714870356 468.2647714870356 4.894549897933871 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}V]NC(Carbamidomethyl (C))V 1.6439 - 318 1 1.955 94517.7 0.5 4921 4429 9335 SUDHL4_400M_050219_1,9352 SUDHL4_400M_050219_1,9352,VIQQAEEKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9353 51.115 800.0 120860.0 25 0 6756.6 29262 QHKGKKKQAK 10 147 394.2464100278415 1179.7174006837245 3 394.2462646365166 MULTI CID FTMS 0 0 0 9335 98261.1015625 0.3998244290048497 1 -0.17889404296875 18 Unmodified _QHKGKKKQAK_ L1MB2_dup4144|chr8:118373987-118374958:-|2.471455437334812|0.0262280702101092|6.56|47.0|34|3|sense 0.6976657623105312 0.723409379185497 5 {M(Oxidation (M))|F} 1 10 8.8224 0.0 0.0 0.74784 0.0 0.0 1014.637610499934 0.0 1014.637610499934 0.0 8.822357765462257 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.74784 - 9 + 1 1.955 79289.6 0.3899999856948852 4922 4429 9335 SUDHL4_400M_050219_1,9353 SUDHL4_400M_050219_1,9353,QHKGKKKQAK False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_1 9354 51.13 800.0 85824.0 25 0 10644.0 + -1 LLNCWYNL 8 103 548.2708976488483 0 548.2800170779228 PEAK CID FTMS 0 0 0 -1 0 19 Carbamidomethyl (C) _LLNC(Carbamidomethyl (C))WYNL_ REV__ENSG00000167699|ENST00000301329|GLOD4;REV__ENST00000576239.5_1_17:674543-685513:-|nuORF;REV__nc|ENSG00000167699|Q9HC38-3|GLOD4;REV__nc|ENSG00000167699|Q9HC38|GLOD4 10.183394434864962 0.5394990767616434 5 DQS 3 -1 7.6959 0.0 0.0 0.70312 0.0 0.0 677.3327060869559 84.04628168277577 761.3789877697317 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 DQS 0.70312 - 73 + 1 1.955 58695.7 0.4600000083446502 4923 4429 9335 SUDHL4_400M_050219_1,9354 SUDHL4_400M_050219_1,9354,LLNCWYNL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9355 51.141 639.0 142140.0 25 0 11107.0 + -1 VTAMFCHHL 9 113 566.2566605976905 1130.4987682621809 2 566.2568237185478 MULTI CID FTMS 0 0 0 9335 86173.3359375 1.0 0 0.0 20 Carbamidomethyl (C),Oxidation (M) _VTAM(Oxidation (M))FC(Carbamidomethyl (C))HHL_ REV__ENSG00000182183|ENST00000517870|SHISAL2A 11.640296217721598 0.521594087909532 5 {[TV]|[{I|L}S]}A 3 -1 20.546 0.0 0.0 1.8174 0.0 0.0 0.0 856.3215886569652 856.3215886569652 6.733937431123279 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}A 1.8174 + + 70 1 1.955 74514.6 1.0 4924 4429 9335 SUDHL4_400M_050219_1,9355 SUDHL4_400M_050219_1,9355,VTAMFCHHL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9357 51.146 61.0 687730.0 25 0 94023.0 + 1564 ALLDRIVSV 9 59 493.3054944842794 984.5964360353588 2 493.3058959841728 MULTI CID FTMS 0 0 0 9356 603145.0625 0.2299022778674697 1 -0.1451911926269531 1 Unmodified _ALLDRIVSV_ ENSG00000155561|ENST00000285968|NUP205 38.61474834105838 0.0830609365873449 5 [{I|L}A]{I|L}D 4 5 38.5 0.0 0.0 3.9102 0.0 0.0 0.0 569.3383272760374 569.3383272760374 -2.122665795563421 0.0 -2.122665795563421 0.0 0 0.3807196863200844 2.0 0.0 0.0 + [{I|L}A]{I|L}D 3.9102 + + 26 + 1 1.954 37731.1 1.0 4925 4430 9356 SUDHL4_400M_050219_1,9357 SUDHL4_400M_050219_1,9357,ALLDRIVSV True True ALLDRIVSV 51.146352 493.305895984173 18466170.0 9356.0 ENSG00000155561|ENST00000285968|NUP205 6.214867273966472 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9358 51.148 53.0 969130.0 25 0 172880.0 + 40376 VIAEILRGV 9 60 485.3080235532348 968.6014941732695 2 485.3084594607353 MULTI CID FTMS 0 0 0 9356 957222.125 0.4904732500153557 1 -0.1451911926269531 2 Unmodified _VIAEILRGV_ ENSG00000101361|ENST00000329276|NOP56 32.78568957990786 0.1150597335874693 5 V{I|L}AE{I|L}{I|L} 6 3 76.146 0.0 0.0 7.8615 0.0 0.0 0.0 327.1787203424438 327.1787203424438 61.92130579805713 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.0 0.0 + V{I|L}AE{I|L}{I|L} 7.8615 + + 67 + 1 1.954 44918.3 1.0 4926 4430 9356 SUDHL4_400M_050219_1,9358 SUDHL4_400M_050219_1,9358,VIAEILRGV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9359 51.151 193.0 307950.0 25 0 63860.0 42067 VQVRGRLQKP 10 72 590.8667026655556 1179.7188523979112 2 590.8669921755791 MULTI CID FTMS 0 0 0 9356 332534.09375 0.2107915266057002 2 -0.3333625793457031 3 Unmodified _VQVRGRLQKP_ ENSG00000145734|ENST00000358731|BDP1;ENST00000508157.3_1_5:70790975-70807035:+|nuORF;ENST00000508917.6_1_5:70751704-70841064:+|nuORF;nc|ENSG00000145734|A6H8Y1-2|BDP1;nc|ENSG00000145734|A6H8Y1-3|BDP1;nc|ENSG00000145734|A6H8Y1-4|BDP1;nc|ENSG00000145734|A6H8Y1-5|BDP1;nc|ENSG00000145734|A6H8Y1-6|BDP1;nc|ENSG00000145734|A6H8Y1-7|BDP1 0.6268255596534771 0.7237370565709429 5 {I|L} 1 9 9.3323 0.0 0.0 0.79106 0.0 0.0 1048.6239560129486 0.0 1048.6239560129486 0.0 8.22306171006713 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.79106 + + 6 + 1 1.954 51608.2 1.0 4927 4430 9356 SUDHL4_400M_050219_1,9359 SUDHL4_400M_050219_1,9359,VQVRGRLQKP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9360 51.155 184.0 368010.0 25 0 33277.0 + 29433 QLFSEIHNL 9 107 550.7910117284006 1099.567470523601 2 550.7908813357353 MULTI CID FTMS 0 0 0 9356 316431.375 1.0 0 0.0 4 Unmodified _QLFSEIHNL_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 49.55428908609986 0.0413471690215031 5 [VP]W{I|L}ES{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 9 7 + 44.279 0.0 0.0 4.027 4.027 82.506 0.0 0.0 0.0 0.5078156421339202 18.585966646385565 0.5078156421339202 8.547823269354936 0 0.5176452685714268 0.6020599913279624 0.0 0.5 [VP]W{I|L}ES{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[Q{I|L}]{M(Oxidation (M))|F}{[RE]|[WV]}P[TP]{I|L};[VP]W{I|L}EC[Q{I|L}]{I|L};[VP]W{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[TP]{I|L};[Q{I|L}]{M(Oxidation (M))|F}[WH]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[VP]W{I|L}{[CT]|[{M(Oxidation (M))|F}G]}A[TP]{I|L};[VP]W{[CT]|[{M(Oxidation (M))|F}G]}{I|L}A[TP]{I|L};[H{I|L}]DT{M(Oxidation (M))|F}N[Q{I|L}]{I|L};[AG]{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}P[TP]{I|L};[AG]{I|L}{M(Oxidation (M))|F}[WH]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 4.027;3.2496;3.1836;2.8472;2.7532;2.7128;2.7128;1.6385;1.6171;1.1159 -;-;-;-;-;-;-;-;-;- 949 1 1.954 56086.6 1.0 4928 4430 9356 SUDHL4_400M_050219_1,9360 SUDHL4_400M_050219_1,9360,QLFSEIHNL True True QLFSEIHNL 51.155004 550.790881335735 3663844.75 9356.0 nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;;ENSG00000136861|ENST00000349780|CDK5RAP2;;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2 5.5417265097300215 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9361 51.158 176.0 310460.0 25 0 33914.0 + 30962 RLALFNPDV 9 79 522.7960213660865 1043.577489798973 2 522.7957031130791 MULTI CID FTMS 0 0 0 9356 305264.75 1.0 0 0.0 5 Unmodified _RLALFNPDV_ ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF 30.63653989081413 0.1413794767160703 5 {M(Oxidation (M))|F}NPDV 5 4 35.515 0.0 0.0 3.4032 0.0 0.0 453.3066200134877 0.0 453.3066200134877 0.0 9.573259432077563 0.0 0.0 0 0.9489700043360187 0.0 0.0 0.3807196863200844 + {M(Oxidation (M))|F}NPDV 3.4032 + + 105 1 1.954 55253.4 1.0 4929 4430 9356 SUDHL4_400M_050219_1,9361 SUDHL4_400M_050219_1,9361,RLALFNPDV False True RLALFNPDV 51.158429 522.795703113079 2309207.25 9356.0 ENST00000486007.1_1_7:10977674-10979684:-|nuORF;;ENSG00000189043|ENST00000339600|NDUFA4 4.616644144058228 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9362 51.161 145.0 493680.0 25 0 65370.0 + 33521 SILEDHKAL 9 97 513.2849957692071 1024.555438605214 2 513.2862426638603 MULTI CID FTMS 0 0 0 9356 297679.875 0.2417557060731624 3 -0.4438323974609375 6 Unmodified _SILEDHKAL_ REV__ENSG00000166793|ENST00000300022|YPEL4;REV__ENST00000528797.5_1_11:57414222-57414580:-|nuORF 19.256988751693697 0.3154191944385105 5 VVQQQE 6 -1 33.345 0.0 0.0 3.2546 0.0 0.0 0.0 310.1780331699203 310.1780331699203 4.126721570519578 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.805462187404089 VVQQQE 3.2546 - 654 1 1.954 62362.9 1.0 4930 4430 9356 SUDHL4_400M_050219_1,9362 SUDHL4_400M_050219_1,9362,SILEDHKAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9363 51.165 182.0 278530.0 25 0 17158.0 -1 0 68 881.4114268818424 1760.8083008304848 2 881.9092895388603 MULTI CID FTMS 0 0 0 9356 283135.375 0.0162220665533842 9 -0.9038429260253906 7 5 Y{M(Oxidation (M))|F}ANEQA[CS]C(Carbamidomethyl (C))V{I|L} 12 -1 59.819 0.0 0.0 3.3972 0.0 0.0 357.23761370767085 0.0 357.23761370767085 0.0 49.36095058536253 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 Y{M(Oxidation (M))|F}ANEQA[CS]C(Carbamidomethyl (C))V{I|L} 3.3972 - 1499 + 1 1.954 39878.0 1.0 4931 4430 9356 SUDHL4_400M_050219_1,9363 SUDHL4_400M_050219_1,9363, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9364 51.169 229.0 229740.0 25 0 48013.0 + -1 KKKKKMMIP 9 60 582.353526390225 1162.69249984725 2 582.3536254763603 MULTI CID FTMS 0 0 0 9356 218029.6875 0.151705673663254 2 -0.3333625793457031 8 2 Oxidation (M) _KKKKKM(Oxidation (M))M(Oxidation (M))IP_ REV__ENSG00000047849|ENST00000683076|MAP4 0.6014990680409731 0.8936861360942873 5 P 1 -1 0.48455 0.0 0.0 0.041675 0.0 0.0 942.5603109818188 120.05098901920157 1062.6113000010205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.041675 + + 1 + 1 1.954 46529.2 1.0 4932 4430 9356 SUDHL4_400M_050219_1,9364 SUDHL4_400M_050219_1,9364,KKKKKMMIP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9365 51.173 203.0 220820.0 25 0 29819.0 + 11692 GLFSALSELGL 11 73 553.8085693449356 1105.602585756671 2 553.8084594607353 MULTI CID FTMS 0 0 0 9356 201405.171875 1.0 0 0.0 9 Unmodified _GLFSALSELGL_ REV__ENST00000342609.6_1_2:191857981-191858245:-|nuORF 27.628801355627647 0.4434699450731472 5 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}A{I|L}TC(Carbamidomethyl (C))V{I|L} 10 -1 + 79.334 0.0 0.0 7.1756 7.1756 92.177 0.0 0.0 0.0 63.68730283469873 13.098943791441968 13.098943791441968 9.164539485499262 0 0.4247425010840047 2.0 0.7742275032520141 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}A{I|L}TC(Carbamidomethyl (C))V{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}A{I|L}T[CG]V{I|L};{[VA]|[{I|L}G]}[YG]T{I|L}AE{I|L}G{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[PS]{I|L}TC(Carbamidomethyl (C))V{I|L};{[VA]|[{I|L}G]}[YG]T{I|L}A{I|L}EG{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[PS]{I|L}T[CG]V{I|L};{[VA]|[{I|L}G]}[YG]T{I|L}A[TP][{I|L}T];{[CP]|[EA]}[YK]{I|L}AE{I|L}G{I|L};{[CP]|[EA]}[YK]{I|L}A{I|L}EG{I|L};{[CP]|[EA]}[YK]{I|L}A[TP][{I|L}T] 7.1756;6.3467;5.5986;5.3678;5.3263;4.5389;4.4997;2.3827;2.1104;1.2838 -;-;-;-;-;-;-;-;-;- 177 + 1 1.954 44763.3 1.0 4933 4430 9356 SUDHL4_400M_050219_1,9365 SUDHL4_400M_050219_1,9365,GLFSALSELGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9366 51.181 460.0 277340.0 25 0 43112.0 20453 LLKKGKSIPDV 11 125 599.3799428340543 1196.7453327349083 2 599.3801757693291 MULTI CID FTMS 0 0 0 9356 197428.21875 0.1445421979189154 2 -0.3333625793457031 10 Unmodified _LLKKGKSIPDV_ ENSG00000152582|ENST00000356031|SPEF2;ENST00000503074.1_1_5:35659153-35697983:+|nuORF;nc|ENSG00000152582|Q9C093-2|SPEF2 6.2057823575117 0.8458686499021061 5 {I|L}DW 3 9 12.703 0.0 0.0 1.0615 0.0 0.0 184.2694549046335 595.2451876275999 779.5146425322334 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DW 1.0615 - 213 + 1 1.954 98543.0 1.0 4934 4430 9356 SUDHL4_400M_050219_1,9366 SUDHL4_400M_050219_1,9366,LLKKGKSIPDV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9367 51.195 800.0 119170.0 25 0 30581.0 -1 MPRKRRDAKRR 11 110 743.4352543790432 1484.8559558248862 2 743.4358398318291 MULTI CID FTMS 0 0 0 9356 162840.90625 0.5223302329437055 1 -0.1451911926269531 11 Oxidation (M) _M(Oxidation (M))PRKRRDAKRR_ ENST00000294119.6_1_11:62444064-62444232:-|nuORF 1.1933415558491238 0.8695176722560516 5 V 1 -1 8.9258 0.0 0.0 0.60112 0.0 0.0 1367.7761198647283 0.0 1367.7761198647283 0.0 5.826836968319542 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.60112 - 27 + 1 1.954 79810.8 0.6600000262260437 4935 4430 9356 SUDHL4_400M_050219_1,9367 SUDHL4_400M_050219_1,9367,MPRKRRDAKRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9368 51.209 800.0 71512.0 25 0 17073.0 + -1 ELKIKVVQCLL 11 87 671.9112636791299 1341.8079744250597 2 671.9118530154228 MULTI CID FTMS 0 0 0 9356 132503.359375 0.3826989702138682 1 -0.1451911926269531 12 Carbamidomethyl (C) _ELKIKVVQC(Carbamidomethyl (C))LL_ REV__ENSG00000118900|ENST00000262376|UBN1;REV__nc|ENSG00000118900|Q9NPG3-2|UBN1 1.1933415558491238 0.8695176722560516 5 {I|L} 1 -1 10.969 0.0 0.0 0.81749 0.0 0.0 1210.71303226373 0.0 1210.71303226373 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.81749 + + 71 + 1 1.954 54890.8 0.6100000143051147 4936 4430 9356 SUDHL4_400M_050219_1,9368 SUDHL4_400M_050219_1,9368,ELKIKVVQCLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9369 51.215 348.0 236080.0 25 0 22578.0 + 9487 FLDGNEMTL 9 114 520.2410891642169 1038.4676253952337 2 520.2416869997978 MULTI CID FTMS 0 0 0 9356 133663.421875 0.4891792202967947 -1 0.17889404296875 13 Unmodified _FLDGNEMTL_ ENSG00000169504|ENST00000374379|CLIC4 21.74664581756881 0.2544899275067181 5 T{I|L} 2 7 21.211 0.0 0.0 2.0426 0.0 0.0 806.3247706362478 0.0 806.3247706362478 0.0 7.376662649262752 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 + T{I|L} 2.0426 + + 107 + 1 1.954 68184.3 1.0 4937 4430 9356 SUDHL4_400M_050219_1,9369 SUDHL4_400M_050219_1,9369,FLDGNEMTL False True FLDGNEMTL 51.215214 520.241686999798 1655819.375 9356.0 ENSG00000169504|ENST00000374379|CLIC4 0.8075493574142456 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9370 51.223 376.0 309540.0 25 0 27600.0 + 23052 SLSFMNPRL 9 121 532.7996301068106 0 532.7867309451103 PEAK CID FTMS 0 0 0 -1 0 14 Unmodified _LSLEELFTL_ ENST00000480373.1_1_10:75888732-75889691:-|nuORF;ENSG00000185009|ENST00000355264|AP3M1 21.74664581756881 0.185237546287679 5 S{M(Oxidation (M))|F}MNW{I|L} 6 7 23.365 0.0 0.0 2.1968 0.0 0.0 200.15195523345977 82.06696497134999 282.21892020480976 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S{M(Oxidation (M))|F}MNW{I|L} 2.1968 - 266 + 1 1.954 92102.5 1.0 4938 4430 9356 SUDHL4_400M_050219_1,9370 SUDHL4_400M_050219_1,9370,LSLEELFTL False False SLSFMNPRL 51.223439 532.78673094511 236331.328125 9356.0 ENST00000480373.1_1_10:75888732-75889691:-|nuORF;;ENSG00000185009|ENST00000355264|AP3M1 5.483969847361247 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9371 51.231 412.0 242330.0 25 0 24209.0 + 15644 KVLDLRINL 9 121 542.348142196013 1082.681731458826 2 542.3486816287041 MULTI CID FTMS 0 0 0 9356 123969.9375 1.0 0 0.0 15 Unmodified _IQITLRNIL_ nc|ENSG00000129003|Q709C8-3|VPS13C;ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C 27.22323531849824 0.1848086127304535 5 KV{I|L}D{I|L}[RN]{I|L}{I|L} 9 3 + 53.032 0.0 0.0 4.8982 4.8982 84.284 0.0 0.0 0.0 18.64169971965603 4.614262661931434 4.614262661931434 7.107022173365117 0 1.0629529932484498 0.585026652029182 0.0 0.0 KV{I|L}D{I|L}[RN]{I|L}{I|L};KV{I|L}D{I|L}[R{I|L}]N{I|L};KV{I|L}D{I|L}[R{I|L}]GG{I|L};{I|L}[WR]{I|L}[RN]{I|L}{I|L};{I|L}[WR]{I|L}[R{I|L}]N{I|L} 4.8982;4.2418;3.2136;1.6467;0.9903 -;-;-;-;- 720 + 1 1.954 80337.0 1.0 4939 4430 9356 SUDHL4_400M_050219_1,9371 SUDHL4_400M_050219_1,9371,IQITLRNIL False False KVLDLRINL 51.23081 542.348681628704 402353.96875 9356.0 nc|ENSG00000129003|Q709C8-3|VPS13C;;ENSG00000129003|ENST00000644861|VPS13C;;nc|ENSG00000129003|Q709C8-4|VPS13C;;nc|ENSG00000129003|Q709C8-2|VPS13C 4.294724146525065 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9372 51.245 800.0 76484.0 25 0 14300.0 20443 LLILLLMFVVW 11 95 680.4245942501693 1358.8346355671383 2 680.4244262576103 MULTI CID FTMS 0 0 0 9356 103853.4765625 0.2738517760957618 1 -0.1451911926269531 16 Unmodified _LLILLLMFVVW_ CDH2|p.V739L|1|0.11|ENSG00000170558|chr18:27983078-27983078|C/A|missense_variant 3.5964929083625545 0.858179447565866 5 {I|L} 1 10 10.969 0.0 0.0 0.80724 0.0 0.0 1227.7393577124494 0.0 1227.7393577124494 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.80724 + + 47 + 1 1.954 55921.2 0.4699999988079071 4940 4430 9356 SUDHL4_400M_050219_1,9372 SUDHL4_400M_050219_1,9372,LLILLLMFVVW False False False False variant PXD020620_cell_line SUDHL4_400M_050219_1 9373 51.258 800.0 84968.0 25 0 20506.0 20686 LLRLPRKSDVE 11 111 663.3976020044986 1324.780651075797 2 663.3990966677666 MULTI CID FTMS 0 0 0 9356 104692.0390625 0.3202031749205572 1 -0.1451911926269531 17 Unmodified _LLRLPRKSDVE_ ENST00000463072.1_1_X:40585991-40588635:-|nuORF 3.2813086475875832 0.8596665074481906 5 {I|L} 1 10 11.109 0.0 0.0 0.83857 0.0 0.0 1193.685388479897 0.0 1193.685388479897 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.83857 + + 50 + 1 1.954 62702.6 0.4600000083446502 4941 4430 9356 SUDHL4_400M_050219_1,9373 SUDHL4_400M_050219_1,9373,LLRLPRKSDVE False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9374 51.269 519.0 166600.0 25 0 11069.0 + 12416 GTKHKGGK 8 115 406.7424097622756 0 406.7424804568291 PEAK CID FTMS 0 0 0 9356 102283.9375 1.0 0 0.0 18 Unmodified _GTKHKGGK_ REV__CON__P62894;REV__ENSG00000172115|ENST00000305786|CYCS 0.6903765706972694 0.5983587967854751 5 {I|L}Q 2 -1 19.464 0.0 0.0 2.3986 0.0 0.0 165.0544417747672 402.26459583891886 567.3190376136861 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}Q 2.3986 - 38 + 1 1.954 72233.1 1.0 4942 4430 9356 SUDHL4_400M_050219_1,9374 SUDHL4_400M_050219_1,9374,GTKHKGGK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9375 51.272 184.0 568440.0 25 0 72604.0 + 20480 LLLDMQNRL 9 83 558.3164864841833 1114.6184200351663 2 558.3146240115166 MULTI CID FTMS 0 0 0 9356 102333.171875 0.2370030039888652 -1 0.17889404296875 19 Unmodified _LLLDMQNRL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;ENST00000538470.2_1_11:61067610-61070684:-|nuORF;ENST00000545894.1_1_11:61069637-61069871:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1 39.94969957227396 0.0757326808254658 5 {I|L}{I|L}{I|L}DMQNR{I|L} 9 0 + 86.859 0.0 0.0 7.7927 7.7927 93.849 0.0 0.0 0.0 71.96423635998758 10.084406814122218 10.084406814122218 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.805462187404089 + + {I|L}{I|L}{I|L}DMQNR{I|L};{I|L}{I|L}{I|L}DMQGGR{I|L};{I|L}{I|L}{I|L}DM[AG]NR{I|L};{I|L}{I|L}{I|L}DM[AG]GGR{I|L};{I|L}HHVVQNR{I|L} 7.7927;6.9666;6.9666;6.1444;1.6423 +;-;-;-;- + 238 + 1 1.954 83394.3 1.0 4943 4430 9356 SUDHL4_400M_050219_1,9375 SUDHL4_400M_050219_1,9375,LLLDMQNRL True True LLLDMQNRL 51.272347 558.314624011517 3092286.75 9356.0 ENST00000545894.1_1_11:61069637-61069871:-|nuORF;;ENSG00000167986|ENST00000301764|DDB1;;nc|ENSG00000167986|Q16531-2|DDB1;;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;;ENST00000538470.2_1_11:61067610-61070684:-|nuORF 4.952271620432536 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9376 51.286 800.0 136830.0 25 0 14444.0 27330 PHRVKTERK 9 123 575.8426133845896 1149.6706738359792 2 575.8436157107353 MULTI CID FTMS 0 0 0 9356 93152.2421875 0.9512736118319148 -1 0.17889404296875 20 Unmodified _PHRVKTERK_ ENST00000548758.1_1_14:36295674-36335014:+|nuORF 2.302733041254933 0.8342969208511092 5 {I|L} 1 9 10.278 0.0 0.0 0.89396 0.0 0.0 1018.57556382797 0.0 1018.57556382797 0.0 -10.691513490831408 -10.691513490831408 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.89396 - 45 + 1 1.954 86669.9 0.4300000071525574 4944 4430 9356 SUDHL4_400M_050219_1,9376 SUDHL4_400M_050219_1,9376,PHRVKTERK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9378 51.291 7.1 6994500.0 25 0 1634100.0 + 20381 LLGPRLVLA 9 55 476.3210213870838 950.6274898409677 2 476.3212158083916 MULTI CID FTMS 0 0 0 9377 13288207.0 1.0 0 0.0 1 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 42.09456458481378 0.0639583784996157 5 {I|L}{I|L}G 3 6 50.247 0.0 0.0 5.2857 0.0 0.0 0.0 664.4157808893186 664.4157808893186 31.30719686320084 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.0 0.0 + {I|L}{I|L}G 5.2857 + + 23 + 1 1.954 43626.4 1.0 4945 4431 9377 SUDHL4_400M_050219_1,9378 SUDHL4_400M_050219_1,9378,LLGPRLVLA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9379 51.299 424.0 188810.0 25 0 10155.0 -1 0 99 1029.8300374569812 3086.468282971144 3 1030.166064441204 MULTI CID FTMS 0 0 0 9377 297195.8125 0.2597129375699239 2 -0.2986412048339844 2 5 [MN]P{[QN]|[E{I|L}]|[KN]}VN[EP]G 10 -1 42.893 0.0 0.0 1.3897 0.0 0.0 0.0 2002.9464073210067 2002.9464073210067 20.83104993179255 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.2742275032520141 [MN]P{[QN]|[E{I|L}]|[KN]}VN[EP]G 1.3897 - 2807 1 1.954 58653.0 1.0 4946 4431 9377 SUDHL4_400M_050219_1,9379 SUDHL4_400M_050219_1,9379, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9380 51.3 36.0 1703600.0 25 0 457040.0 + 34062 SLLEKSLGL 9 66 480.2919935096692 958.5694340861384 2 480.2920104861259 MULTI CID FTMS 0 0 0 9377 2199132.25 1.0 0 0.0 3 Unmodified _SLLEKSLGL_ ENSG00000124802|ENST00000379715|EEF1E1;nc|ENSG00000124802|O43324-2|EEF1E1 69.10491478415734 0.0214449631113747 5 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 7 3 70.01 0.0 0.0 7.3036 0.0 0.0 0.0 328.1876306041435 328.1876306041435 56.03031650958563 0.0 0.0 0.0 0 1.325257498915995 2.0 1.1307196863200843 0.0 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 7.3036 - 330 1 1.954 54289.1 1.0 4947 4431 9377 SUDHL4_400M_050219_1,9380 SUDHL4_400M_050219_1,9380,SLLEKSLGL True True SLLEKSLGL 51.299747 480.292010486126 37961336.0 9377.0 ENSG00000124802|ENST00000379715|EEF1E1;;nc|ENSG00000124802|O43324-2|EEF1E1 2.1415380438168845 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9381 51.313 789.0 269830.0 25 0 10641.0 -1 0 155 1023.8274976975654 3068.460663692896 3 1024.162768542767 MULTI CID FTMS 0 0 0 9377 376401.5625 1.0 0 0.0 4 5 [MN]MVN[QP]NEN[MD]N 13 -1 83.175 0.0 0.0 2.7106 0.0 0.0 0.0 1533.6990289172295 1533.6990289172295 37.59098545115715 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.805462187404089 1.2302046884880935 [MN]MVN[QP]NEN[MD]N 2.7106 - 26143 + 1 1.954 139926.8 1.0 4948 4431 9377 SUDHL4_400M_050219_1,9381 SUDHL4_400M_050219_1,9381, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9382 51.318 234.0 444290.0 25 0 64239.0 19872 LHMDSDDEI 9 135 537.7237016257426 1073.432850318285 2 537.7245971560478 MULTI CID FTMS 0 0 0 9377 291715.15625 0.5085407571428929 1 -0.18817138671875 5 Unmodified _LHMDSDDEI_ ENSG00000104218|ENST00000678616|CSPP1;ENST00000521168.5_1_8:68070723-68107652:+|nuORF;nc|ENSG00000104218|Q1MSJ5-1|CSPP1;nc|ENSG00000104218|Q1MSJ5-2|CSPP1;nc|ENSG00000104218|Q1MSJ5|CSPP1 13.50788311687929 0.4710407108020397 5 [H{I|L}]DM{I|L}C 6 6 33.399 0.0 0.0 3.1114 0.0 0.0 0.0 358.1082402931476 358.1082402931476 13.334865012623318 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [H{I|L}]DM{I|L}C 3.1114 - 1028 1 1.954 83054.5 1.0 4949 4431 9377 SUDHL4_400M_050219_1,9382 SUDHL4_400M_050219_1,9382,LHMDSDDEI False True ILQDGRIFI 51.317826 537.724597156048 1318592.125 9377.0 nc|ENSG00000125835|P14678-3|SNRPB;;ENSG00000128739|ENST00000390687|SNRPN;;nc|ENSG00000125835|P14678|SNRPB;;ENSG00000125835|ENST00000381342|SNRPB;;nc|ENSG00000128739|P63162-2|SNRPN 3.75833280881246 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9383 51.332 800.0 87371.0 25 0 15796.0 + 44387 YLTNEGIQYL 10 101 607.3083257003669 1212.6020984675338 2 607.3079711794853 MULTI CID FTMS 0 0 0 9377 178595.15625 0.1468078747791862 2 -0.2986412048339844 6 Unmodified _YLTNEGIQYL_ chr6:34425221-34425583|48|67.1|0.0|22.68|-|ENST00000494077|RPS10-NUDT3,RPS10;ENSG00000124614|ENST00000648437|RPS10;ENST00000408001.1_1_6:34712123-34712447:+|nuORF;ENST00000439253.1_1_9:90631298-90631598:+|nuORF;ENST00000440748.1_1_7:37415149-37415623:+|nuORF;ENST00000480942.1_1_6:34392413-34392935:-|nuORF 36.12702656103203 0.1984647928738587 5 [Y{I|L}]Q{[DS]|[MA]|[CV]|TT}R[{M(Oxidation (M))|F}V]GE 10 8 + 42.034 0.0 0.0 3.4665 3.4665 74.78 0.0 0.0 0.0 1.452176730645057 1.452176730645057 1.452176730645057 1.452176730645057 0 0.3807196863200844 1.6989700043360187 0.0 0.7134679910804405 [Y{I|L}]Q{[DS]|[MA]|[CV]|TT}R[{M(Oxidation (M))|F}V]GE;{M(Oxidation (M))|F}{M(Oxidation (M))|F}[Q{I|L}]{[ES]|[DT]|[{I|L}C]}G{I|L}SW;{M(Oxidation (M))|F}{M(Oxidation (M))|F}[Q{I|L}]G{[ES]|[DT]|[{I|L}C]}{I|L}SW;[Y{I|L}]QG{[ES]|[DT]|[{I|L}C]}[Q{I|L}][Y{I|L}];{M(Oxidation (M))|F}{M(Oxidation (M))|F}[Q{I|L}]{[ES]|[DT]|[{I|L}C]}G{I|L}C(Carbamidomethyl (C)){I|L};[Y{I|L}]Q{[DS]|[MA]|[CV]|TT}R[R{M(Oxidation (M))|F}]E;[Y{I|L}]Q{[ES]|[DT]|[{I|L}C]}[KP]YW;[Y{I|L}]Q{[ES]|[DT]|[{I|L}C]}G[Q{I|L}][Y{I|L}];{M(Oxidation (M))|F}{M(Oxidation (M))|F}[Q{I|L}]G{[ES]|[DT]|[{I|L}C]}{I|L}C(Carbamidomethyl (C)){I|L};{M(Oxidation (M))|F}G[{M(Oxidation (M))|F}V]RH[HQ]W 3.4665;3.3467;2.9532;2.8765;2.8313;2.6138;2.5876;2.4831;2.4379;2.3655 -;-;-;-;-;-;-;-;-;- 375 1 1.954 56649.9 0.6299999952316284 4950 4431 9377 SUDHL4_400M_050219_1,9383 SUDHL4_400M_050219_1,9383,YLTNEGIQYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9384 51.34 483.0 437050.0 25 0 67100.0 + 33660 RLFEGNALL 9 157 516.7953663051914 1031.5761796771826 2 516.7947265505791 MULTI CID FTMS 0 0 0 9377 158773.671875 0.7330448241297383 -1 0.1451911926269531 7 Unmodified _SITQRMAII_ ENSG00000170889|ENST00000302907|RPS9 36.12702656103203 0.0967173616627612 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REGNA{I|L}{I|L} 9 5 + 61.269 0.0 0.0 5.9394 5.9394 82.308 0.0 0.0 0.0 1.7609125905568137 9.44460515398866 1.7609125905568137 1.7609125905568137 0 0.8494850021680094 0.0 0.2887254899964357 0.3054621874040891 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REGNA{I|L}{I|L};[R{I|L}]{M(Oxidation (M))|F}EGNA{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REGGGA{I|L}{I|L};[R{I|L}]{M(Oxidation (M))|F}EGGGA{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}R{[WN]|[YH]}A{I|L}{I|L};{[TV]|[{I|L}S]}TKS{[CP]|[EA]}A{I|L}{I|L};{[TV]|[{I|L}S]}[R{I|L}][C(Carbamidomethyl (C))S]A{I|L}{I|L};[R{I|L}]{M(Oxidation (M))|F}{[WN]|[YH]}A{I|L}{I|L};[K{I|L}]{NN|[MP]|[D{I|L}]|[EV]}[C(Carbamidomethyl (C))S]A{I|L}{I|L};[R{I|L}]{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))S]A{I|L}{I|L} 5.9394;5.7687;5.0468;4.8761;3.7856;3.6549;3.3946;3.335;2.531;2.4252 -;-;-;-;-;-;-;-;-;- 816 1 1.954 161795.9 1.0 4951 4431 9377 SUDHL4_400M_050219_1,9384 SUDHL4_400M_050219_1,9384,SITQRMAII True False RLFEGNALL 51.340216 516.794726550579 2036174.25 9377.0 ENSG00000170889|ENST00000302907|RPS9 5.413502216339111 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9385 51.351 617.0 152060.0 25 0 35271.0 + 27293 PHKGLVLL 8 111 438.78686339361457 875.5591738540292 2 438.7868224978447 MULTI CID FTMS 0 0 0 9377 147560.71875 1.0 0 0.0 8 Unmodified _PHKGLVLL_ ENSG00000262246|ENST00000251166|CORO7;ENST00000572274.1_1_16:4391391-4409335:-|nuORF;ENST00000575531.5_1_16:4407102-4412712:-|nuORF;ENST00000575714.5_1_16:4408319-4455566:-|nuORF;nc|ENSG00000262246|P57737-2|CORO7;nc|ENSG00000262246|P57737-3|CORO7;nc|ENSG00000262246|P57737-4|CORO7 14.581692164780916 0.6954967302934248 5 A{I|L}{I|L} 3 6 30.362 0.0 0.0 3.4677 0.0 0.0 560.3434315412125 0.0 560.3434315412125 0.0 23.37205316164642 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 A{I|L}{I|L} 3.4677 - 57 1 1.954 78774.6 1.0 4952 4431 9377 SUDHL4_400M_050219_1,9385 SUDHL4_400M_050219_1,9385,PHKGLVLL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9386 51.365 800.0 60866.0 25 0 12552.0 -1 VMKMKKRVRRR 11 75 760.4613685033667 1518.9081840735332 2 760.4621459841728 MULTI CID FTMS 0 0 0 9377 122545.9375 0.4268385600730752 2 -0.2986412048339844 9 2 Oxidation (M) _VM(Oxidation (M))KM(Oxidation (M))KKRVRRR_ ENST00000295321.8_1_2:128262310-128262487:-|nuORF 0.3070304955306653 0.8736993455979228 5 MG 2 -1 10.969 0.0 0.0 0.72217 0.0 0.0 759.515562883201 568.3175753229124 1327.8331382061133 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MG 0.72217 - 47 + 1 1.954 45305.4 0.5099999904632568 4953 4431 9377 SUDHL4_400M_050219_1,9386 SUDHL4_400M_050219_1,9386,VMKMKKRVRRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9387 51.38 800.0 138850.0 25 0 14600.0 19302 LEKWKYPRKRV 11 104 751.9486844538516 1501.882815974503 2 751.9490234255791 MULTI CID FTMS 0 0 0 9377 104874.3125 0.4607624116457227 2 -0.2986412048339844 10 Unmodified _LEKWKYPRKRV_ ENST00000605834.1_1_4:185396718-185397009:+|nuORF 1.0714618166137932 0.8700927088084459 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V 4 9 25.802 0.0 0.0 1.718 0.0 0.0 0.0 1042.6369837687637 1042.6369837687637 7.341736652060788 0.0 0.0 0.0 0 0.0 0.0 0.9604093769761876 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V 1.718 - 315 1 1.954 87039.8 0.550000011920929 4954 4431 9377 SUDHL4_400M_050219_1,9387 SUDHL4_400M_050219_1,9387,LEKWKYPRKRV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9388 51.393 731.0 111520.0 25 0 11348.0 -1 LLALRGFCAL 10 118 567.3295302192895 1132.644507505379 2 567.3293334841728 MULTI CID FTMS 0 0 0 9377 95116.2265625 0.9956693873181596 1 -0.18817138671875 11 Carbamidomethyl (C) _LLALRGFC(Carbamidomethyl (C))AL_ ENSG00000215912|ENST00000401095|TTC34 1.844237919475145 0.7181058121064529 5 {I|L} 1 -1 10.0 0.0 0.0 0.88289 0.0 0.0 1001.5496263792056 0.0 1001.5496263792056 0.0 1.2763625255165325 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.88289 + + 13 + 1 1.954 66680.2 1.0 4955 4431 9377 SUDHL4_400M_050219_1,9388 SUDHL4_400M_050219_1,9388,LLALRGFCAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9389 51.404 568.0 169440.0 25 0 15396.0 + 31102 RLLETVIDV 9 131 529.3160415483956 1056.617530163591 2 529.3164550662041 MULTI CID FTMS 0 0 0 9377 92600.5078125 1.0 0 0.0 12 Unmodified _RLLETVIDV_ ENSG00000179409|ENST00000319004|GEMIN4 31.26834338654808 0.1333407332142048 5 TV{I|L}DV 5 4 52.123 0.0 0.0 4.933 0.0 0.0 511.3136463849625 0.0 511.3136463849625 0.0 32.941453415473205 0.0 0.0 0 0.8807196863200843 0.0 0.7742275032520141 0.0 + TV{I|L}DV 4.933 + + 199 1 1.954 77273.8 1.0 4956 4431 9377 SUDHL4_400M_050219_1,9389 SUDHL4_400M_050219_1,9389,RLLETVIDV False True RLLETVIDV 51.403951 529.316455066204 1109126.75 9377.0 ENSG00000179409|ENST00000319004|GEMIN4 4.875081698099772 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9390 51.418 800.0 215210.0 25 0 13020.0 -1 0 132 915.4418211679772 1828.869089402754 2 914.9384033083916 MULTI CID FTMS 0 0 0 9377 327201.8125 1.0 0 0.0 13 5 {[QV]|[N{I|L}]|[RA]|[KV]}{[CT]|[{M(Oxidation (M))|F}G]}N[TA]QQNA{M(Oxidation (M))|F}YE{[NV]|[RG]} 16 -1 + 76.072 0.0 0.0 4.1595 4.1595 78.141 0.0 0.0 0.0 13.171004948161633 42.075025190615136 13.171004948161633 2.8322691656989463 0 0.0 1.5228787452803376 0.0 1.4802046884880935 {[QV]|[N{I|L}]|[RA]|[KV]}{[CT]|[{M(Oxidation (M))|F}G]}N[TA]QQNA{M(Oxidation (M))|F}YE{[NV]|[RG]};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}A{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}NA{M(Oxidation (M))|F}YE{[NV]|[RG]};{[QV]|[N{I|L}]|[RA]|[KV]}YEYYQNA{M(Oxidation (M))|F}YE{[NV]|[RG]};{[QV]|[N{I|L}]|[RA]|[KV]}{[CT]|[{M(Oxidation (M))|F}G]}N{[WN]|[YH]}QNA{M(Oxidation (M))|F}YE{[NV]|[RG]};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}A{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}GGA{M(Oxidation (M))|F}YE{[NV]|[RG]};{[QV]|[N{I|L}]|[RA]|[KV]}YEYY[AG]NA{M(Oxidation (M))|F}YE{[NV]|[RG]};{[QV]|[N{I|L}]|[RA]|[KV]}YEYYQGGA{M(Oxidation (M))|F}YE{[NV]|[RG]};[YQ]{M(Oxidation (M))|F}VA{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}NA{M(Oxidation (M))|F}YE{[NV]|[RG]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[HM]{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}NA{M(Oxidation (M))|F}YE{[NV]|[RG]};[YQ]V{M(Oxidation (M))|F}A{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}NA{M(Oxidation (M))|F}YE{[NV]|[RG]} 4.1595;4.0046;3.9997;3.7926;3.5108;3.5049;3.5049;3.4139;3.2988;3.1628 -;-;-;-;-;-;-;-;-;- 6199 1 1.954 117313.2 0.9700000286102296 4957 4431 9377 SUDHL4_400M_050219_1,9390 SUDHL4_400M_050219_1,9390, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9391 51.432 800.0 208920.0 25 0 17563.0 -1 0 142 1010.8115655704154 3029.412867311446 3 1011.483264148235 MULTI CID FTMS 0 0 0 9377 230520.40625 0.4921007017351218 1 -0.18817138671875 14 5 C{I|L}NTDE[W{I|L}] 8 -1 43.396 0.0 0.0 1.4325 0.0 0.0 2036.980690653046 0.0 2036.980690653046 0.0 11.84853525674674 0.0 0.0 0 0.0 0.0 1.329689690656103 1.1989700043360187 C{I|L}NTDE[W{I|L}] 1.4325 - 7494 + 1 1.954 110008.1 0.7400000095367432 4958 4431 9377 SUDHL4_400M_050219_1,9391 SUDHL4_400M_050219_1,9391, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9392 51.447 800.0 85347.0 25 0 28347.0 -1 0 81 1034.8353613437553 0 1035.169726550579 PEAK CID FTMS 0 0 0 9377 122914.71875 1.0 0 0.0 15 5 EKP 3 -1 9.0411 0.0 0.0 0.43726 0.0 0.0 1259.2666566701294 451.1935824029906 1710.46023907312 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EKP 0.43726 - 228 + 1 1.954 51429.6 0.6200000047683716 4959 4431 9377 SUDHL4_400M_050219_1,9392 SUDHL4_400M_050219_1,9392, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9393 51.461 800.0 111430.0 25 0 12010.0 + 15917 ISVPLSRRNKN 11 105 642.3802158026925 1282.745878672185 2 642.3803588747978 MULTI CID FTMS 0 0 0 9377 127471.8125 1.0 0 0.0 16 Unmodified _ISVPLSRRNKN_ REV__ENSG00000111961|ENST00000367467|SASH1 5.296884461304476 0.8501568894076437 5 {I|L} 1 -1 9.2694 0.0 0.0 0.72262 0.0 0.0 1151.6508296993318 0.0 1151.6508296993318 0.0 5.289959734888434 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.72262 + + 20 + 1 1.954 70470.8 0.5299999713897705 4960 4431 9377 SUDHL4_400M_050219_1,9393 SUDHL4_400M_050219_1,9393,ISVPLSRRNKN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9394 51.474 800.0 139280.0 25 0 23048.0 -1 SLLRYMVKQL 10 96 633.8673657676317 0 633.8669921755791 PEAK CID FTMS 0 0 0 9377 114861.4765625 1.0 0 0.0 17 Oxidation (M) _SLLRYM(Oxidation (M))VKQL_ ENSG00000123360|ENST00000243052|PDE1B 3.2813086475875832 0.3961065659209837 5 C(Carbamidomethyl (C)) 1 -1 2.4743 0.0 0.0 0.19548 0.0 0.0 691.4549941311633 411.2218111627563 1102.6768052939196 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.19548 - 11 + 1 1.954 90676.2 0.5 4961 4431 9377 SUDHL4_400M_050219_1,9394 SUDHL4_400M_050219_1,9394,SLLRYMVKQL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9396 51.492 800.0 93445.0 25 0 7233.6 + 43137 VYPFPGPIPN 10 134 550.7910117284006 1099.567470523601 2 550.7914916872978 MULTI CID FTMS 0 0 0 9395 56411.390625 0.1782736955998753 2 -0.2279396057128906 1 Unmodified _VYPFPGPIPN_ CON__P02666 25.399314129420983 0.3980215340001851 5 [YV]P 3 7 20.406 0.0 0.0 1.8558 0.0 0.0 0.0 737.3602311039323 737.3602311039323 8.812281309285623 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 + [YV]P 1.8558 + + 342 1 1.954 60010.7 0.9800000190734864 4962 4432 9395 SUDHL4_400M_050219_1,9396 SUDHL4_400M_050219_1,9396,VYPFPGPIPN False True False False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 9397 51.493 49.0 1294600.0 25 0 134140.0 42479 VTHLPVGVTV 10 54 511.3056858987855 1020.596818864371 2 511.3057128787041 MULTI CID FTMS 0 0 0 9395 936953.9375 0.5360141101066868 -1 0.18817138671875 2 Unmodified _VTHLPVGVTV_ ENSG00000072195|ENST00000312358|SPEG;nc|ENSG00000072195|Q15772-1|SPEG 30.63653989081413 0.2803493085145199 5 EV[YQ]{I|L}VTV 8 6 57.186 0.0 0.0 5.6031 0.0 0.0 71.07428176093906 0.0 71.07428176093906 0.0 38.24539712336197 0.0 0.0 0 0.8494850021680094 0.0 1.055462187404089 0.0 EV[YQ]{I|L}VTV 5.6031 - 51 1 1.954 54012.1 1.0 4963 4432 9395 SUDHL4_400M_050219_1,9397 SUDHL4_400M_050219_1,9397,VTHLPVGVTV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9398 51.495 49.0 1225700.0 25 0 198790.0 + 37888 TLWGIQKEL 9 80 544.3113776988487 1086.6082024644973 2 544.3114501833916 MULTI CID FTMS 0 0 0 9395 885677.875 0.4568881628408248 -1 0.18817138671875 3 Unmodified _TLWGIQKEL_ ENSG00000134333|ENST00000422447|LDHA;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA 75.76082778847304 0.0188720312721366 5 [{I|L}T]WG{I|L}Q 6 3 63.179 0.0 0.0 5.8143 0.0 0.0 0.0 385.20933884705096 385.20933884705096 34.62475921527662 0.0 0.0 0.0 0 1.174742501084005 2.0 0.0 1.079689690656103 + [{I|L}T]WG{I|L}Q 5.8143 + + 403 + 1 1.954 51342.5 1.0 4964 4432 9395 SUDHL4_400M_050219_1,9398 SUDHL4_400M_050219_1,9398,TLWGIQKEL True True TLWGIQKEL 51.494669 544.311450183392 28422018.0 9395.0 nc|ENSG00000134333|P00338-4|LDHA;;nc|ENSG00000134333|P00338-3|LDHA;;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;;ENSG00000134333|ENST00000422447|LDHA;;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 6.701411088307698 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9399 51.497 81.0 492860.0 25 0 115290.0 11896 GLVTPPARRQL 11 53 604.3668191142004 1206.7190852952008 2 604.3669921755791 MULTI CID FTMS 0 0 0 9395 632086.0 0.7380485533676912 -1 0.18817138671875 4 Unmodified _GLVTPPARRQL_ ENST00000412770.6_2_19:55758407-55770251:-|nuORF 0.0948413911109767 0.8747004676205551 5 P 1 10 1.5938 0.0 0.0 0.13208 0.0 0.0 1008.600919256918 98.03795801334218 1106.6388772702603 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.13208 + + 2 + 1 1.954 34117.3 1.0 4965 4432 9395 SUDHL4_400M_050219_1,9399 SUDHL4_400M_050219_1,9399,GLVTPPARRQL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9400 51.498 71.0 969740.0 25 0 208490.0 + 33874 SLFGGSVKL 9 85 454.2655486307163 906.5165443282326 2 454.2659484744072 MULTI CID FTMS 0 0 0 9395 549241.0625 0.6396490141871481 -1 0.18817138671875 5 Unmodified _SLFGGSVKL_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000477798.5_1_3:33840175-33866683:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 20.41453444215458 0.284085796332423 5 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[SG]VK{I|L} 9 0 + 47.255 0.0 0.0 5.2128 5.2128 82.216 0.0 0.0 0.0 29.99987159072728 5.260266353185408 5.260266353185408 3.4678748622465605 0 0.7302046884880937 2.0 0.0 0.0 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[SG]VK{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[NS]VK{I|L} 5.2128;4.8303 +;- + 147 + 1 1.954 58534.6 1.0 4966 4432 9395 SUDHL4_400M_050219_1,9400 SUDHL4_400M_050219_1,9400,SLFGGSVKL False True SLFGGSVKL 51.498185 454.265948474407 10843526.0 9395.0 ENST00000477798.5_1_3:33840175-33866683:+|nuORF;;ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 5.354403177897136 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9401 51.5 104.0 390570.0 25 0 71537.0 + 11798 GLLTEIRAV 9 54 486.2978512844549 970.5811496357098 2 486.2977172732353 MULTI CID FTMS 0 0 0 9395 378759.875 1.0 0 0.0 6 Unmodified _GLLTEIRAV_ ENSG00000164543|ENST00000319357|STK17A 26.268140514670165 0.1969607489560049 5 {[VA]|[{I|L}G]}{I|L}TE{I|L}RAV 9 0 + 65.569 0.0 0.0 6.7556 6.7556 95.486 0.0 0.0 0.0 54.85531242661757 4.09765299137284 4.09765299137284 32.14964095499695 0 1.1989700043360187 2.0 0.4247425010840047 0.0 + + {[VA]|[{I|L}G]}{I|L}TE{I|L}RAV;{[VA]|[{I|L}G]}{I|L}[R{M(Oxidation (M))|F}][VP]AV 6.7556;3.4432 +;- + 64 + 1 1.954 37820.9 1.0 4967 4432 9395 SUDHL4_400M_050219_1,9401 SUDHL4_400M_050219_1,9401,GLLTEIRAV False True GLLTEIRAV 51.500404 486.297717273235 2317953.0 9395.0 ENSG00000164543|ENST00000319357|STK17A 5.173768202463786 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9402 51.502 65.0 254120.0 25 0 45033.0 + 42286 VSRKDLRLVR 10 32 621.3931153128103 1240.7716776924206 2 621.3931152224541 MULTI CID FTMS 0 0 0 9395 342771.5 0.9591426320377968 -3 0.5122566223144531 7 Unmodified _VSRKDLRLVR_ REV__ENSG00000104221|ENST00000220659|BRF2;REV__nc|ENSG00000104221|Q9HAW0-2|BRF2 0.0 0.726636491536033 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.954 19489.5 1.0 4968 4432 9395 SUDHL4_400M_050219_1,9402 SUDHL4_400M_050219_1,9402,VSRKDLRLVR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9403 51.506 188.0 261340.0 25 0 19825.0 + 31022 RLFNDPVAMV 10 64 581.3073986099299 1160.6002442866595 2 581.3076660037041 MULTI CID FTMS 0 0 0 9395 245261.984375 1.0 0 0.0 8 Unmodified _RLFNDPVAMV_ ENSG00000214160|ENST00000397676|ALG3;ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3 14.40537977576856 0.6058337302021266 5 DPVAMV 6 4 33.218 0.0 0.0 2.8622 0.0 0.0 530.2942982404312 0.0 530.2942982404312 0.0 19.72357194224834 0.0 0.0 0 0.718765315847925 0.0 0.0 0.0 + DPVAMV 2.8622 + + 33 1 1.954 47199.8 1.0 4969 4432 9395 SUDHL4_400M_050219_1,9403 SUDHL4_400M_050219_1,9403,RLFNDPVAMV False True RLFNDPVAMV 51.505623 581.307666003704 1609283.875 9395.0 ENST00000461415.5_1_3:183962900-183966669:-|nuORF;;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;;nc|ENSG00000214160|Q92685-2|ALG3;;ENSG00000214160|ENST00000397676|ALG3 6.965144952138265 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9404 51.508 110.0 619230.0 25 0 102940.0 + 9464 FLDDVVHSL 9 79 522.7733281386292 1043.5321033440582 2 522.7723876833916 MULTI CID FTMS 0 0 0 9395 222450.015625 0.7591600928217762 -1 0.18817138671875 9 Unmodified _FLDDVVHSL_ ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C 54.773552608820026 0.0299037012502309 5 [{I|L}A][NG]VVDD{I|L}E 10 6 + 52.897 0.0 0.0 5.0691 5.0691 79.963 0.0 0.0 0.0 1.8645603910890003 1.8645603910890003 1.8645603910890003 1.8645603910890003 0 0.4247425010840047 1.6989700043360187 0.4247425010840047 0.0 [{I|L}A][NG]VVDD{I|L}E;{M(Oxidation (M))|F}{I|L}DDVVHS{I|L};{M(Oxidation (M))|F}{I|L}DDVVHTV;[{I|L}A][RN]VDD{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[HG]|PP}VDD{I|L}E;{[TV]|[{I|L}S]}H{[CP]|[EA]}[{M(Oxidation (M))|F}V]{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]DD{I|L}E;[HV]T{[CP]|[EA]}[{M(Oxidation (M))|F}V]{I|L}E;{M(Oxidation (M))|F}{I|L}[{M(Oxidation (M))|F}V]{[CP]|[EA]}[YR];[HS]{I|L}{[CP]|[EA]}[{M(Oxidation (M))|F}V]{I|L}E 5.0691;4.8904;4.6606;4.4431;2.5767;1.9571;1.9559;1.5885;1.5447;1.4198 -;+;-;-;-;-;-;-;-;- + 169 1 1.954 59117.0 1.0 4970 4432 9395 SUDHL4_400M_050219_1,9404 SUDHL4_400M_050219_1,9404,FLDDVVHSL True True FLDDVVHSL 51.507956 522.772387683392 1951081.5 9395.0 nc|ENSG00000171988|Q15652-3|JMJD1C;;nc|ENSG00000171988|Q15652-2|JMJD1C;;ENSG00000171988|ENST00000399262|JMJD1C 6.607735633850098 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9405 51.522 800.0 154860.0 25 0 8760.5 -1 0 122 1004.8074787467366 3011.4006068404096 3 1005.143420398235 MULTI CID FTMS 0 0 0 9395 184959.78125 1.0 0 0.0 10 5 [MN][YG]H[MN]D 8 -1 44.754 0.0 0.0 1.4862 0.0 0.0 0.0 2045.9907041844065 2045.9907041844065 11.485933389820635 0.0 0.0 0.0 0 0.805462187404089 2.0 0.7302046884880937 0.4247425010840047 [MN][YG]H[MN]D 1.4862 - 2334 + 1 1.954 87741.5 0.800000011920929 4971 4432 9395 SUDHL4_400M_050219_1,9405 SUDHL4_400M_050219_1,9405, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9406 51.529 381.0 219830.0 25 0 74264.0 22409 LPTELKRKKEQ 11 88 685.411035829321 1368.807518725442 2 685.4120361208916 MULTI CID FTMS 0 0 0 9395 184471.6875 0.5449758056013722 -1 0.18817138671875 11 Unmodified _LPTELKRKKEQ_ ENSG00000154153|ENST00000306320|RETREG1;nc|ENSG00000154153|Q9H6L5-2|RETREG1 1.3296431237094175 0.8688745925763601 5 M 1 11 0.71334 0.0 0.0 0.052114 0.0 0.0 720.4485232193857 514.2898043268186 1234.7383275462043 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.052114 - 23 + 1 1.954 82620.4 1.0 4972 4432 9395 SUDHL4_400M_050219_1,9406 SUDHL4_400M_050219_1,9406,LPTELKRKKEQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9407 51.532 196.0 324930.0 25 0 33690.0 + 25921 NLLPHAINL 9 90 502.7976546968407 0 502.7979308962822 PEAK CID FTMS 0 0 0 9395 173951.765625 0.8613059846495553 -1 0.18817138671875 12 Unmodified _NLLPHAINL_ ENSG00000141968|ENST00000602142|VAV1;nc|ENSG00000141968|P15498-2|VAV1 52.268347100219714 0.0254642048063414 5 {I|L}{I|L}N{I|L}A 5 6 20.935 0.0 0.0 2.086 0.0 0.0 245.13564034895643 231.0892275445922 476.2248678935487 0.0 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 {I|L}{I|L}N{I|L}A 2.086 - 187 + 1 1.954 53191.9 1.0 4973 4432 9395 SUDHL4_400M_050219_1,9407 SUDHL4_400M_050219_1,9407,NLLPHAINL True True NLLPHAINL 51.532408 502.797930896282 1279613.375 9395.0 ENSG00000141968|ENST00000602142|VAV1;;nc|ENSG00000141968|P15498-2|VAV1 5.245023727416992 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9408 51.538 282.0 161600.0 25 0 29963.0 31695 RRMKHKKQL 9 58 408.9221575445086 1223.7446432337258 3 408.9220764040947 MULTI CID FTMS 0 0 0 9395 152818.203125 0.5174197293985225 -1 0.18817138671875 13 Unmodified _RRMKHKKQL_ ENSG00000188909|ENST00000343035|BSX 0.2690200627634905 0.9052928095555272 5 {I|L} 1 8 9.8329 0.0 0.0 0.80351 0.0 0.0 1092.64947219056 0.0 1092.64947219056 0.0 0.1551711686998391 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.80351 + + 7 + 1 1.954 42534.7 1.0 4974 4432 9395 SUDHL4_400M_050219_1,9408 SUDHL4_400M_050219_1,9408,RRMKHKKQL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9409 51.542 176.0 188550.0 25 0 14855.0 + 9489 FLDHIIASV 9 78 507.7850402047596 1013.5555274763192 2 507.7843810915947 MULTI CID FTMS 0 0 0 9395 147915.390625 1.0 0 0.0 14 Unmodified _FLDHIIASV_ ENSG00000120733|ENST00000314358|KDM3B;nc|ENSG00000120733|Q7LBC6-2|KDM3B;nc|ENSG00000120733|Q7LBC6-3|KDM3B 26.88365393820708 0.1891292719743517 5 [VS]YY{I|L}{I|L}ASV 9 4 [VS]YY{I|L}{I|L}A + + 22.22 15.027 1.8565 2.1923 2.1923 53.062 0.0 0.0 0.0 0.0 2.554463620187189 0.0 0.0 0 0.3807196863200844 0.0 0.2215141619232908 0.0 [VS]YY{I|L}{I|L}ASV 2.1923 - 66 + 1 1.954 32582.1 1.0 4975 4432 9395 SUDHL4_400M_050219_1,9409 SUDHL4_400M_050219_1,9409,FLDHIIASV False True FLDHIIASV 51.542183 507.784381091595 1509474.125 9395.0 nc|ENSG00000120733|Q7LBC6-3|KDM3B;;ENSG00000120733|ENST00000314358|KDM3B;;nc|ENSG00000120733|Q7LBC6-2|KDM3B 7.089970588684082 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9410 51.556 800.0 107220.0 25 0 25454.0 19196 LEFRYKKRVYK 11 93 765.4482057946134 1528.881858656027 2 765.4485961794853 MULTI CID FTMS 0 0 0 9395 138236.234375 0.7209670819838642 -1 0.18817138671875 15 Unmodified _LEFRYKKRVYK_ ENSG00000162105|ENST00000601538|SHANK2 2.6312355333042263 0.8627335947654684 5 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}W 4 8 15.45 0.0 0.0 1.0105 0.0 0.0 0.0 950.5839820293266 950.5839820293266 2.262357117701086 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}W 1.0105 - 132 1 1.954 75083.7 0.6200000047683716 4976 4432 9395 SUDHL4_400M_050219_1,9410 SUDHL4_400M_050219_1,9410,LEFRYKKRVYK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9411 51.561 262.0 222150.0 25 0 11634.0 + 43233 WASPPGRWL 9 97 535.2819810542644 1068.5494091753287 2 535.2822143435478 MULTI CID FTMS 0 0 0 9395 122019.3828125 0.7926600156598567 1 -0.1104698181152343 16 Unmodified _WASPPGRWL_ nc|ENSG00000213402|Q14761|PTPRCAP 17.44264345198275 0.3645313841742926 5 WASP 4 5 61.324 0.0 0.0 5.739 0.0 0.0 0.0 624.3268538140583 624.3268538140583 49.54168197305668 0.0 0.0 0.0 0 1.2396518287104437 1.6989700043360187 0.0 0.0 + WASP 5.739 + + 77 + 1 1.954 51506.4 1.0 4977 4432 9395 SUDHL4_400M_050219_1,9411 SUDHL4_400M_050219_1,9411,WASPPGRWL False True WASPPGRWL 51.560896 535.282214343548 2030314.0 9395.0 nc|ENSG00000213402|Q14761|PTPRCAP 5.176697254180908 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 9412 51.565 193.0 278140.0 25 0 89518.0 + 13485 HLVKRKRRPVD 11 68 702.43737522492 1402.8601975166398 2 702.4373657107353 MULTI CID FTMS 0 0 0 9395 108833.125 0.8934232256663506 -3 0.5122566223144531 17 Unmodified _HLVKRKRRPVD_ REV__ENSG00000136237|ENST00000665637|RAPGEF5;REV__nc|ENSG00000136237|Q92565-2|RAPGEF5;REV__nc|ENSG00000136237|Q92565|RAPGEF5 1.3295316138638542 0.8688751186870782 5 R 1 -1 3.9794 0.0 0.0 0.28366 0.0 0.0 1032.639294051599 211.0978640192016 1243.737158070801 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.28366 + + 10 + 1 1.954 53959.8 1.0 4978 4432 9395 SUDHL4_400M_050219_1,9412 SUDHL4_400M_050219_1,9412,HLVKRKRRPVD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9413 51.568 202.0 189780.0 25 0 80924.0 22777 LQRGLRRRRL 10 40 662.4319664460098 1322.8493799588196 2 662.4318725466728 MULTI CID FTMS 0 0 0 9395 91402.0390625 0.8719860314817857 -3 0.5122566223144531 18 Unmodified _LQRGLRRRRL_ ENST00000549384.5_1_12:109042624-109125250:-|nuORF;ENST00000551059.1_1_12:109094839-109125250:-|nuORF 0.4007161486938917 0.7247829448918255 5 {I|L} 1 9 6.9897 0.0 0.0 0.52838 0.0 0.0 883.5811437301071 323.1721285455688 1206.753272275676 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.52838 + + 2 + 1 1.954 37923.5 1.0 4979 4432 9395 SUDHL4_400M_050219_1,9413 SUDHL4_400M_050219_1,9413,LQRGLRRRRL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9414 51.574 281.0 222450.0 25 0 20966.0 + 43203 RAAEPLLTL 9 91 492.2976678387856 982.5807827443712 2 492.2980529665947 MULTI CID FTMS 0 0 0 9395 90674.8046875 0.8623913519342101 -1 0.18817138671875 19 Unmodified _WAAVLPLTL_ nc|ENSG00000165525|O60524-5|NEMF;ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF 19.438996006549623 0.310492472477042 5 [{I|L}A]GWP{I|L}{I|L}T{I|L} 9 5 + 43.294 0.0 0.0 4.4061 4.4061 87.962 0.0 0.0 0.0 19.488474775526186 9.577570906191896 9.577570906191896 19.488474775526186 0 0.7429928190999391 2.0 0.0 0.0 [{I|L}A]GWP{I|L}{I|L}T{I|L};[Q{I|L}]WP{I|L}{I|L}T{I|L} 4.4061;2.4227 -;- 105 1 1.954 52807.3 1.0 4980 4432 9395 SUDHL4_400M_050219_1,9414 SUDHL4_400M_050219_1,9414,WAAVLPLTL False False RAAEPLLTL 51.573645 492.298052966595 1266499.25 9395.0 nc|ENSG00000165525|O60524-5|NEMF;;ENSG00000165525|ENST00000298310|NEMF;;nc|ENSG00000165525|O60524-3|NEMF;;nc|ENSG00000165525|O60524-4|NEMF 1.92559626698494 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9415 51.585 570.0 152300.0 25 0 52894.0 + + 29310 KLWDNELQYV 10 82 653.9190379137785 1305.823522894357 2 653.9191161990166 MULTI CID FTMS 0 0 0 9395 82575.8828125 0.6473885218144618 -1 0.18817138671875 20 Unmodified _QIKRKAQPPKL_ ENST00000526755.5_1_8:42911676-42932640:+|nuORF;ENST00000530657.1_1_11:85906626-85907241:+|nuORF;ENSG00000168522|ENST00000302279|FNTA;nc|ENSG00000168522|P49354-2|FNTA 2.9952420565917617 0.861016188266951 5 Q{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[YV]YV 8 -1 18.999 0.0 0.0 1.4549 0.0 0.0 279.31478333590604 0.0 279.31478333590604 0.0 9.1657354526544 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 Q{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[YV]YV 1.4549 - 38 + 1 1.954 78205.8 1.0 4981 4432 9395 SUDHL4_400M_050219_1,9415 SUDHL4_400M_050219_1,9415,QIKRKAQPPKL False False KLWDNELQYV 51.584824 653.919116199017 250939.203125 9395.0 ENST00000526755.5_1_8:42911676-42932640:+|nuORF;;ENST00000530657.1_1_11:85906626-85907241:+|nuORF;;ENSG00000168522|ENST00000302279|FNTA;;nc|ENSG00000168522|P49354-2|FNTA 6.004244009653728 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9417 51.59 28.0 1898800.0 25 0 429810.0 + 20382 LLGPRLVLA 9 66 476.3210213870838 950.6274898409677 2 476.3213378787041 MULTI CID FTMS 0 0 0 9416 1780838.75 0.1340164816818401 2 -0.1628532409667968 1 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 42.09456458481378 0.0639583784996157 5 {I|L}{I|L}C 3 7 44.609 0.0 0.0 4.6926 0.0 0.0 0.0 618.4123018854124 618.4123018854124 25.669015600442577 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L}C 4.6926 - 35 + 1 1.954 46535.2 1.0 4982 4433 9416 SUDHL4_400M_050219_1,9417 SUDHL4_400M_050219_1,9417,LLGPRLVLA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9418 51.591 64.0 999910.0 25 0 249090.0 + 34063 SLLEKSLGL 9 83 480.2919935096692 958.5694340861384 2 480.2922851443291 MULTI CID FTMS 0 0 0 9416 1051481.25 0.4781346142325001 2 -0.1628532409667968 2 Unmodified _SLLEKSLGL_ ENSG00000124802|ENST00000379715|EEF1E1;nc|ENSG00000124802|O43324-2|EEF1E1 47.74868867922204 0.0453060283459952 5 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 7 3 68.276 0.0 0.0 7.1227 0.0 0.0 0.0 328.1873289438134 328.1873289438134 54.78092914350263 0.0 0.0 0.0 0 1.0 2.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 7.1227 - 431 1 1.954 58231.3 1.0 4983 4433 9416 SUDHL4_400M_050219_1,9418 SUDHL4_400M_050219_1,9418,SLLEKSLGL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9419 51.595 187.0 261420.0 25 0 38070.0 31707 RRPKPGLSPLS 11 77 403.246426248657 1206.7174493461712 3 403.2466308474541 MULTI CID FTMS 0 0 0 9416 433726.03125 1.0 0 0.0 3 Unmodified _RRPKPGLSPLS_ ENST00000488391.5_1_9:130913785-130915395:+|nuORF 1.3296431237094175 0.8688745925763601 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.954 41066.4 1.0 4984 4433 9416 SUDHL4_400M_050219_1,9419 SUDHL4_400M_050219_1,9419,RRPKPGLSPLS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9420 51.598 154.0 382470.0 25 0 58039.0 31471 RPVSWRFLVLP 11 76 457.27583091627554 1368.8056633490266 3 457.2762634158134 MULTI CID FTMS 0 0 0 9416 320123.625 1.0 0 0.0 4 Unmodified _RPVSWRFLVLP_ ENST00000483825.5_1_1:167400597-167400867:-|nuORF 1.214830529360525 0.8694162858786273 5 {I|L} 1 10 10.969 0.0 0.0 0.80136 0.0 0.0 1237.7107059289078 0.0 1237.7107059289078 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.80136 + + 9 + 1 1.954 57890.2 1.0 4985 4433 9416 SUDHL4_400M_050219_1,9420 SUDHL4_400M_050219_1,9420,RPVSWRFLVLP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9421 51.602 193.0 271620.0 25 0 31807.0 + -1 GHCYMLADAL 10 89 583.751735558134 1165.488918183068 2 583.7522460818291 MULTI CID FTMS 0 0 0 9416 310369.8125 0.4890649898068722 -1 0.1104698181152343 5 Carbamidomethyl (C),Oxidation (M) _GHC(Carbamidomethyl (C))YM(Oxidation (M))LADAL_ REV__chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;REV__chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;REV__ENSG00000178999|ENST00000585124|AURKB;REV__nc|ENSG00000178999|Q96GD4-2|AURKB;REV__nc|ENSG00000178999|Q96GD4-4|AURKB;REV__nc|ENSG00000178999|Q96GD4-5|AURKB 12.531546534597751 0.6372748319968624 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GAS[C(Carbamidomethyl (C))C]{I|L}G{[QN]|[E{I|L}]|[KN]} 11 -1 + 43.975 0.0 0.0 3.7731 3.7731 80.561 0.0 0.0 0.0 12.384480114358176 15.787367613688907 12.384480114358176 6.391307656375638 0 0.0 1.154901959985743 0.4247425010840047 0.75 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GAS[C(Carbamidomethyl (C))C]{I|L}G{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GAS[C(Carbamidomethyl (C))C]W{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QS[C(Carbamidomethyl (C))C]{I|L}G{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GAS[C(Carbamidomethyl (C))C]DA{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QS[C(Carbamidomethyl (C))C]W{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}QS[C(Carbamidomethyl (C))C]DA{I|L}{I|L};[WQ]AS[C(Carbamidomethyl (C))C]{I|L}G{[QN]|[E{I|L}]|[KN]};[WQ]AS[C(Carbamidomethyl (C))C]DA{I|L}{I|L};{[VA]|[{I|L}G]}A{[QC]|[C(Carbamidomethyl (C))A]}[C(Carbamidomethyl (C))C]{I|L}G{[QN]|[E{I|L}]|[KN]};{[VA]|[{I|L}G]}A{[QC]|[C(Carbamidomethyl (C))A]}[C(Carbamidomethyl (C))C]DA{I|L}{I|L} 3.7731;3.2247;3.2089;3.1892;2.6642;2.625;2.0035;1.4196;1.0431;0.82359 -;-;-;-;-;-;-;-;-;- 264 1 1.954 43098.3 1.0 4986 4433 9416 SUDHL4_400M_050219_1,9421 SUDHL4_400M_050219_1,9421,GHCYMLADAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9422 51.604 142.0 384380.0 25 0 19699.0 + 16867 KIFDEILVNA 10 87 581.3292958390219 1160.6440387448438 2 581.3301269412041 MULTI CID FTMS 0 0 0 9416 162521.109375 0.203313863086368 -2 0.2986412048339844 6 Unmodified _KIFDEILVNA_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant 29.84058131909904 0.2982332456971691 5 {I|L}{I|L}K{I|L}V{[QG]|[NA]} 7 5 42.211 0.0 0.0 3.6368 0.0 0.0 391.1392384259781 0.0 391.1392384259781 0.0 26.012969751618083 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.4247425010840047 {I|L}{I|L}K{I|L}V{[QG]|[NA]} 3.6368 - 151 1 1.954 46547.0 1.0 4987 4433 9416 SUDHL4_400M_050219_1,9422 SUDHL4_400M_050219_1,9422,KIFDEILVNA False True KIFDEILVNA 51.604408 581.330126941204 5484696.0 9416.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant;;ENSG00000077097|ENST00000264331|TOP2B;;nc|ENSG00000131747|P11388-2|TOP2A 3.051781177520752 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9423 51.609 228.0 216700.0 25 0 15019.0 + 14034 RIPAYFVTV 9 77 532.8081287182677 1063.6017045033352 2 533.3090087771416 MULTI CID FTMS 0 0 0 9416 155115.125 0.3581605222664981 -8 1.135517120361328 7 Unmodified _IAHLVPSQTV_ ENSG00000204394|ENST00000375663|VARS1;ENST00000461874.1_1_6:31749609-31749932:-|nuORF;ENST00000483275.1_1_6:31749724-31750195:-|nuORF 11.640296217721598 0.652229146672156 5 QY{M(Oxidation (M))|F}V[QA] 6 8 20.01 0.0 0.0 1.8814 0.0 0.0 309.20994765449376 0.0 309.20994765449376 0.0 3.24462415139152 0.0 0.0 0 0.0 0.0 0.0 0.0 QY{M(Oxidation (M))|F}V[QA] 1.8814 - 82 1 1.954 45403.4 1.0 4988 4433 9416 SUDHL4_400M_050219_1,9423 SUDHL4_400M_050219_1,9423,IAHLVPSQTV False True RIPAYFVTV 51.608712 533.309008777142 1446371.375 9416.0 ENSG00000204394|ENST00000375663|VARS1;;ENST00000461874.1_1_6:31749609-31749932:-|nuORF;;ENST00000483275.1_1_6:31749724-31750195:-|nuORF 5.6587653160095215 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9424 51.618 555.0 148100.0 25 0 26333.0 20085 LIWLELFLQLV 11 111 462.95164632303056 1385.8331095692918 3 462.9520446658134 MULTI CID FTMS 0 0 0 9416 151564.890625 1.0 0 0.0 8 Unmodified _LIWLELFLQLV_ ENST00000266604.6_1_12:66517251-66517542:-|nuORF 3.5964929083625545 0.858179447565866 5 {I|L}{I|L}GDC(Carbamidomethyl (C)) 5 9 17.944 0.0 0.0 1.2948 0.0 0.0 0.0 824.5567173175917 824.5567173175917 7.4595372608497 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.2742275032520141 0.0 {I|L}{I|L}GDC(Carbamidomethyl (C)) 1.2948 - 124 1 1.954 78182.1 1.0 4989 4433 9416 SUDHL4_400M_050219_1,9424 SUDHL4_400M_050219_1,9424,LIWLELFLQLV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9425 51.623 234.0 144410.0 25 0 8724.9 -1 0 65 881.4114268818424 1760.8083008304848 2 881.9094726443291 MULTI CID FTMS 0 0 0 9416 144344.46875 0.0082701272445217 12 -0.9165000915527344 9 5 Y{M(Oxidation (M))|F}AD{[{M(Oxidation (M))|F}H]|[RQ]}{[QG]|[NA]}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 11 -1 36.151 0.0 0.0 2.0531 0.0 0.0 357.22365835177226 0.0 357.22365835177226 0.0 29.160850142391105 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.2887254899964357 Y{M(Oxidation (M))|F}AD{[{M(Oxidation (M))|F}H]|[RQ]}{[QG]|[NA]}{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 2.0531 - 284 + 1 1.954 29776.7 1.0 4990 4433 9416 SUDHL4_400M_050219_1,9425 SUDHL4_400M_050219_1,9425, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9426 51.637 800.0 163200.0 25 0 13633.0 + 37155 TIAEGLTLAQV 11 157 558.3164864841833 1114.6184200351663 2 558.3176147341728 MULTI CID FTMS 0 0 0 9416 108958.875 0.2523480921493451 2 -0.1628532409667968 10 Unmodified _TIAEGLTLAQV_ ENSG00000140632|ENST00000321919|GLYR1;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 51.629811660486645 0.1086041609037681 5 {I|L}{I|L}{I|L}DCNRR{I|L} 9 10 + 60.214 0.0 0.0 5.4022 5.4022 79.699 0.0 0.0 0.0 25.307152470893428 0.0436480540244943 0.0436480540244943 0.8398012892939377 0 0.805462187404089 1.6989700043360187 0.0 0.0 {I|L}{I|L}{I|L}DCNRR{I|L};{I|L}{I|L}{I|L}DCG[KS]APV;{I|L}{I|L}{I|L}DCGA{I|L}AN{I|L};{I|L}{I|L}{I|L}DCGA{I|L}AQV;{I|L}{I|L}{I|L}DCRRN{I|L};{I|L}{I|L}{I|L}DCRRQV;{I|L}{I|L}{I|L}DCG[RV]N{I|L};{I|L}{I|L}{I|L}DCG[RV]QV;{I|L}{I|L}{I|L}DC(Carbamidomethyl (C))[KS]APV;{I|L}{I|L}{I|L}DC(Carbamidomethyl (C))A{I|L}AN{I|L} 5.4022;5.3268;5.2727;5.2076;5.1731;5.108;5.0009;4.9359;4.8284;4.7743 -;-;-;-;-;-;-;-;-;- 3601 + 1 1.954 100479.8 0.5199999809265137 4991 4433 9416 SUDHL4_400M_050219_1,9426 SUDHL4_400M_050219_1,9426,TIAEGLTLAQV True True TIAEGLTLAQV 51.636683 558.317614734173 1417703.125 9416.0 nc|ENSG00000140632|Q49A26-5|GLYR1;;nc|ENSG00000140632|Q49A26-3|GLYR1;;nc|ENSG00000140632|Q49A26-4|GLYR1;;ENSG00000140632|ENST00000321919|GLYR1;;nc|ENSG00000140632|Q49A26-2|GLYR1 4.783034404118856 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9427 51.642 318.0 237080.0 25 0 19536.0 + 44162 YLDPSVLSGV 10 108 525.2793364612213 1048.5441199892423 2 525.2808105349541 MULTI CID FTMS 0 0 0 9416 97410.140625 0.5083610390178015 -2 0.2986412048339844 11 Unmodified _YLDPSVLSGV_ ENSG00000170540|ENST00000304414|ARL6IP1;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;nc|ENSG00000170540|Q15041-2|ARL6IP1;nc|ENSG00000170540|Q15041-3|ARL6IP1 39.957323273325 0.1580177220464651 5 [YV]E 3 8 27.447 0.0 0.0 2.6177 0.0 0.0 0.0 654.3453949738706 654.3453949738706 3.705065448681921 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [YV]E 2.6177 - 177 1 1.954 63314.4 1.0 4992 4433 9416 SUDHL4_400M_050219_1,9427 SUDHL4_400M_050219_1,9427,YLDPSVLSGV False True YLDPSVLSGV 51.642482 525.280810534954 1060737.5 9416.0 nc|ENSG00000170540|Q15041-3|ARL6IP1;;ENST00000569976.5_1_16:18806770-18812824:-|nuORF;;ENSG00000170540|ENST00000304414|ARL6IP1;;nc|ENSG00000170540|Q15041-2|ARL6IP1 6.575822353363037 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9428 51.646 201.0 317580.0 25 0 110890.0 -1 0 37 627.3672658327124 626.3599893661124 1 627.3676635622978 MULTI CID FTMS 0 0 0 9416 304434.0 0.5046047395267932 1 -0.1174697875976562 12 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.954 55796.6 1.0 4993 4433 9416 SUDHL4_400M_050219_1,9428 SUDHL4_400M_050219_1,9428, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9429 51.65 201.0 376980.0 25 0 71214.0 + 15488 IPSSAKVPA 9 101 435.2593532152746 0 435.2596313357353 PEAK CID FTMS 0 0 0 9416 127193.9296875 0.4951379485561862 5 -0.3730201721191406 13 Unmodified _IPSSAKVPA_ REV__ENSG00000163872|ENST00000305135|YEATS2 30.22481116460888 0.1097735003385577 5 SSA 3 -1 14.671 0.0 0.0 1.6892 0.0 0.0 413.2648479326992 207.11438928775627 620.3792372204555 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7134679910804405 0.0 SSA 1.6892 + + 178 + 1 1.954 61193.0 1.0 4994 4433 9416 SUDHL4_400M_050219_1,9429 SUDHL4_400M_050219_1,9429,IPSSAKVPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9430 51.66 467.0 213450.0 25 0 21591.0 44396 YLVVPSGAYI 10 143 541.3006561973461 1080.5867594614922 2 541.3014404177666 MULTI CID FTMS 0 0 0 9416 127334.390625 1.0 0 0.0 14 Unmodified _YLVVPSGAYI_ ENSG00000157093|ENST00000287748|LYZL4 26.88365393820708 0.3646707531412818 5 Y{I|L}M 3 8 47.435 0.0 0.0 4.3897 0.0 0.0 0.0 670.3820284479124 670.3820284479124 10.034153025231518 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 Y{I|L}M 4.3897 - 833 + 1 1.954 79082.6 1.0 4995 4433 9416 SUDHL4_400M_050219_1,9430 SUDHL4_400M_050219_1,9430,YLVVPSGAYI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9431 51.673 800.0 95776.0 25 0 3803.4 -1 0 103 1029.8300374569812 3086.468282971144 3 1030.163623034954 MULTI CID FTMS 0 0 0 9416 128044.21875 0.1118950496330039 4 -0.3367919921875 15 5 [MN]P 3 -1 21.171 0.0 0.0 0.68593 0.0 0.0 0.0 2741.308101656944 2741.308101656944 1.9627248839266545 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [MN]P 0.68593 - 1048 1 1.954 57459.5 0.4900000095367431 4996 4433 9416 SUDHL4_400M_050219_1,9431 SUDHL4_400M_050219_1,9431, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9432 51.687 800.0 84057.0 25 0 20295.0 + -1 WRRKFRLKLPM 11 89 773.9609374988335 1545.9073220644668 2 773.9608032107353 MULTI CID FTMS 0 0 0 9416 116472.6171875 1.0 0 0.0 16 Oxidation (M) _WRRKFRLKLPM(Oxidation (M))_ REV__ENSG00000105722|ENST00000222329|ERF;REV__nc|ENSG00000105722|P50548-2|ERF 1.1933415558491238 0.8695176722560516 5 {I|L} 1 -1 10.0 0.0 0.0 0.64687 0.0 0.0 1414.812120503723 0.0 1414.812120503723 0.0 1.4608280609188284 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.64687 + + 15 + 1 1.954 59409.1 0.4799999892711639 4997 4433 9416 SUDHL4_400M_050219_1,9432 SUDHL4_400M_050219_1,9432,WRRKFRLKLPM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9433 51.702 800.0 172410.0 25 0 16578.0 + + 34134 FLDELAQKL 9 150 538.3205387626633 1074.6265245921263 2 538.8224365115166 MULTI CID FTMS 0 0 0 9416 113286.828125 0.640125543185996 1 -0.1174697875976562 17 Unmodified _SLLSMRQKL_ ENST00000591149.5_1_19:2807001-2808381:+|nuORF;ENST00000589087.5_1_19:2806818-2807876:+|nuORF;ENSG00000172009|ENST00000307741|THOP1 26.88365393820708 0.1891292719743517 5 QA{I|L}ED{I|L}K 7 -1 36.207 0.0 0.0 3.3693 0.0 0.0 259.1901663327559 0.0 259.1901663327559 0.0 7.507978027151879 0.0 0.0 0 0.0 0.0 0.0 0.6109243748081782 QA{I|L}ED{I|L}K 3.3693 - 1209 1 1.954 107589.1 0.4600000083446502 4998 4433 9416 SUDHL4_400M_050219_1,9433 SUDHL4_400M_050219_1,9433,SLLSMRQKL False False FLDELAQKL 51.702341 538.822436511517 307848.96875 9416.0 ENST00000591149.5_1_19:2807001-2808381:+|nuORF;;ENST00000589087.5_1_19:2806818-2807876:+|nuORF;;ENSG00000172009|ENST00000307741|THOP1 3.842727661132813 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9435 51.713 391.0 213730.0 25 0 21533.0 20395 LLGSFISGQL 10 133 517.7970160324312 1033.5794791316623 2 518.2985717654228 MULTI CID FTMS 0 0 0 9434 74365.203125 0.2932793636429011 5 -0.3425407409667969 1 Unmodified _LLGSFISGQL_ ENSG00000197375|ENST00000245407|SLC22A5;ENST00000461013.5_1_5:131713711-131714174:+|nuORF;nc|ENSG00000197375|O76082-3|SLC22A5 11.640296217721598 0.652229146672156 5 {I|L}{I|L}[YQ][R{I|L}][QT] 8 6 + 17.905 0.0 0.0 1.7323 1.7323 70.776 0.0 0.0 0.0 0.1173221300049363 0.1173221300049363 0.1173221300049363 0.1173221300049363 0 0.0 2.0 0.0 0.0 {I|L}{I|L}[YQ][R{I|L}][QT];[KP]{M(Oxidation (M))|F}T[WR]TV;[KP]{M(Oxidation (M))|F}T[WR]S{I|L};{[VA]|[{I|L}G]}DK{M(Oxidation (M))|F}{I|L}{I|L}[QT] 1.7323;1.721;1.474;0.93183 -;-;-;- 237 1 1.951 64164.8 1.0 4999 4434 9434 SUDHL4_400M_050219_1,9435 SUDHL4_400M_050219_1,9435,LLGSFISGQL False True LLFKEGVMV 51.713184 518.298571765423 1373397.875 9434.0 nc|ENSG00000101278|Q9NQ39|RPS10P5;;ENSG00000124614|ENST00000648437|RPS10;;chr6:34425221-34425583|48|67.1|0.0|22.68|-|ENST00000494077|RPS10-NUDT3,RPS10 3.6309816042582193 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9436 51.716 152.0 453190.0 25 0 61840.0 + + 18631 ALFPERITV 9 86 523.3054112752408 1044.5962696172817 2 523.3062011599541 MULTI CID FTMS 0 0 0 9434 233208.359375 0.8263362540042498 1 -0.0453834533691406 2 Unmodified _LAFPVSIWL_ nc|ENSG00000137343|Q5SQI0-5|ATAT1;nc|ENSG00000137343|Q5SQI0|ATAT1;nc|ENSG00000137343|Q5SQI0-7|ATAT1;nc|ENSG00000137343|Q5SQI0-4|ATAT1;nc|ENSG00000137343|Q5SQI0-3|ATAT1;nc|ENSG00000137343|Q5SQI0-6|ATAT1 21.74664581756881 0.2544899275067181 5 [{I|L}A]{M(Oxidation (M))|F}PE 5 -1 39.23 0.0 0.0 3.7555 0.0 0.0 0.0 484.2894381158813 484.2894381158813 24.831159561447684 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [{I|L}A]{M(Oxidation (M))|F}PE 3.7555 - 123 + 1 1.951 58151.1 1.0 5000 4434 9434 SUDHL4_400M_050219_1,9436 SUDHL4_400M_050219_1,9436,LAFPVSIWL False False ALFPERITV 51.716217 523.306201159954 2033379.375 9434.0 nc|ENSG00000137343|Q5SQI0-5|ATAT1;;nc|ENSG00000137343|Q5SQI0|ATAT1;;nc|ENSG00000137343|Q5SQI0-7|ATAT1;;nc|ENSG00000137343|Q5SQI0-4|ATAT1;;nc|ENSG00000137343|Q5SQI0-3|ATAT1;;nc|ENSG00000137343|Q5SQI0-6|ATAT1 5.386142094930013 2.0 False 9.0 True nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 9437 51.73 800.0 197770.0 25 0 21571.0 34096 SLLKERAI 8 156 465.2931059389412 928.5716589446824 2 465.2927123904228 MULTI CID FTMS 0 0 0 9434 109732.9140625 0.971054167098759 -1 0.1174697875976562 3 Unmodified _SLLKERAI_ ENSG00000169314|ENST00000402217|C22orf15;ENST00000477921.1_1_22:24105340-24106628:+|nuORF;nc|nan|Q8WYQ4-2|C22orf15 42.09456458481378 0.1992492688217789 5 {[TV]|[{I|L}S]}{I|L}SG{I|L}RA{I|L} 9 3 + 59.739 0.0 0.0 6.4334 6.4334 87.548 0.0 0.0 0.0 47.26457517210222 8.461149292312129 8.461149292312129 5.4009906763229125 0 0.75 2.0 0.4247425010840047 0.2742275032520141 {[TV]|[{I|L}S]}{I|L}SG{I|L}RA{I|L};{[TV]|[{I|L}S]}{I|L}A[VS]RA{I|L};{[TV]|[{I|L}S]}A{I|L}[VS]RA{I|L};{[TV]|[{I|L}S]}AVS{I|L}RA{I|L};{[TV]|[{I|L}S]}{I|L}S[KS][VP]V 6.4334;5.8518;4.7199;3.842;3.7303 -;-;-;-;- 269 + 1 1.951 123137.7 0.4699999988079071 5001 4434 9434 SUDHL4_400M_050219_1,9437 SUDHL4_400M_050219_1,9437,SLLKERAI False True SLISGIIRA 51.730034 465.292712390423 841491.75 9434.0 ENSG00000119392|ENST00000309971|GLE1;;nc|ENSG00000119392|Q53GS7-2|GLE1 3.4628539085388184 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9438 51.74 556.0 207660.0 25 0 25722.0 + 40933 VLTASGYLA 9 126 447.7486649522505 893.4827769713011 2 447.7476989626884 MULTI CID FTMS 0 0 0 9434 86908.46875 0.7001229715345348 -1 0.1174697875976562 4 Unmodified _VLTASGYLA_ REV__ENSG00000130957|ENST00000375337|FBP2 23.1484247019978 0.2366544122328345 5 [{I|L}V]{M(Oxidation (M))|F}S 4 -1 33.302 0.0 0.0 3.7272 0.0 0.0 0.0 444.2216890924438 444.2216890924438 13.60924374808178 0.0 0.0 0.0 0 0.75 2.0 0.2614393726401688 0.0 [{I|L}V]{M(Oxidation (M))|F}S 3.7272 - 219 + 1 1.951 91203.9 1.0 5002 4434 9434 SUDHL4_400M_050219_1,9438 SUDHL4_400M_050219_1,9438,VLTASGYLA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9439 51.748 444.0 225810.0 25 0 79875.0 -1 0 74 633.3553307791823 632.3480543125822 1 633.3533203005791 MULTI CID FTMS 0 0 0 9434 120252.3359375 0.8537487283040716 1 -0.0453834533691406 5 5 {I|L} 1 -1 9.9148 0.0 0.0 1.5679 0.0 0.0 501.253218962776 0.0 501.253218962776 0.0 -0.2176801528335836 -0.2176801528335836 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5679 - 6 + 1 1.951 78950.1 1.0 5003 4434 9434 SUDHL4_400M_050219_1,9439 SUDHL4_400M_050219_1,9439, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9441 51.752 91.0 714030.0 25 0 70518.0 + 42480 RLFSSIVTV 9 76 511.3056858987855 1020.596818864371 2 511.3058654665947 MULTI CID FTMS 0 0 0 9440 695124.5 0.3976679379511713 2 -0.1739387512207031 1 Unmodified _VTHLPVGVTV_ ENSG00000167264|ENST00000565263|DUS2 37.97399986684836 0.1789611706409123 5 EV[YQ]{I|L}VTV 8 6 56.279 0.0 0.0 5.5144 0.0 0.0 71.07433516670078 0.0 71.07433516670078 0.0 37.427834771286186 0.0 0.0 0 0.6109243748081782 0.0 1.5044321917401078 0.0 EV[YQ]{I|L}VTV 5.5144 - 78 1 1.951 54037.6 1.0 5004 4435 9440 SUDHL4_400M_050219_1,9441 SUDHL4_400M_050219_1,9441,VTHLPVGVTV False False RLFSSIVTV 51.752463 511.305865466595 23793618.0 9440.0 ENSG00000167264|ENST00000565263|DUS2 4.497191429138184 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9442 51.766 800.0 130990.0 25 0 16736.0 27470 PKGAGQGH 8 96 751.3872836510916 750.3800071844915 1 751.3873779177666 MULTI CID FTMS 0 0 0 9440 95571.6484375 0.2282288435584321 3 -0.2101669311523437 2 Unmodified _PKGAGQGH_ ENST00000356798.10_1_16:30515548-30516720:+|nuORF 0.6903765706972694 0.8201419426409876 5 {NN|[MP]|[D{I|L}]|[EV]}EVY{I|L} 6 7 + 50.741 0.0 0.0 6.762 6.762 83.509 0.0 0.0 0.0 1.042782920690172 14.69273760456403 1.042782920690172 1.042782920690172 0 0.7134679910804405 0.744727494896694 0.7742275032520141 0.0 {NN|[MP]|[D{I|L}]|[EV]}EVY{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}VY{I|L};{NN|[MP]|[D{I|L}]|[EV]}VEY{I|L};[{I|L}V]DEY{I|L};{NN|[MP]|[D{I|L}]|[EV]}EYV{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}YV{I|L};{[QN]|[E{I|L}]|[KN]}DVY{I|L};[YV]EEV{I|L};[YV]ED{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}YEV{I|L} 6.762;6.623;5.4657;5.3766;5.329;5.1901;4.7888;4.5074;3.9771;3.5595 -;-;-;-;-;-;-;-;-;- 264 1 1.951 81457.1 0.4300000071525574 5005 4435 9440 SUDHL4_400M_050219_1,9442 SUDHL4_400M_050219_1,9442,PKGAGQGH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9443 51.774 453.0 307790.0 25 0 23006.0 + 9731 FLYSDEVQI 9 150 557.2766120635862 1112.5386711939725 2 557.2770263552666 MULTI CID FTMS 0 0 0 9440 228481.59375 0.5346349535520404 -1 0.0453834533691406 3 Unmodified _FLYSDEVQI_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;nc|ENSG00000064726|Q9H0C5-2|BTBD1 81.86404211737425 0.017065112157077 5 {[{M(Oxidation (M))|F}C]|[YS]}DE{I|L}{M(Oxidation (M))|F}VQ{I|L} 9 4 + 39.988 0.0 0.0 3.5943 3.5943 73.302 0.0 0.0 0.0 0.0835593887173757 5.898255349109512 0.0835593887173757 0.0835593887173757 0 0.6435078169319297 0.0 1.5471062485323517 0.0 {[{M(Oxidation (M))|F}C]|[YS]}DE{I|L}{M(Oxidation (M))|F}VQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{M(Oxidation (M))|F}{I|L}YVQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SY{I|L}{M(Oxidation (M))|F}VQ{I|L};{[{M(Oxidation (M))|F}C]|[YS]}DE{M(Oxidation (M))|F}{I|L}VQ{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SY{M(Oxidation (M))|F}{I|L}VQ{I|L};{[DS]|[MA]|[CV]|TT}E{M(Oxidation (M))|F}{I|L}YVQ{I|L};{[DS]|[MA]|[CV]|TT}YE{I|L}{M(Oxidation (M))|F}VQ{I|L};{[DS]|[MA]|[CV]|TT}EY{I|L}{M(Oxidation (M))|F}VQ{I|L};{[DS]|[MA]|[CV]|TT}YE{M(Oxidation (M))|F}{I|L}VQ{I|L};{[DS]|[MA]|[CV]|TT}EY{M(Oxidation (M))|F}{I|L}VQ{I|L} 3.5943;3.5868;3.56;3.5072;3.4728;3.3973;3.3744;3.3704;3.2873;3.2833 -;-;-;-;-;-;-;-;-;- 2243 1 1.951 112374.8 1.0 5006 4435 9440 SUDHL4_400M_050219_1,9443 SUDHL4_400M_050219_1,9443,FLYSDEVQI True True FLYSDEVQI 51.774357 557.277026355267 3229195.75 9440.0 ENSG00000133243|ENST00000255608|BTBD2;;nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1 4.219730854034424 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9444 51.783 501.0 381180.0 25 0 77028.0 + 33733 SLADLYFRA 9 133 528.2796382408321 1054.5447235484642 2 528.2799560427666 MULTI CID FTMS 0 0 0 9440 196410.125 0.5705257075082697 -1 0.0453834533691406 4 Unmodified _SLADLYFRA_ ENSG00000196510|ENST00000455511|ANAPC7;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 74.19965305603844 0.0194755241623067 5 {[TV]|[{I|L}S]}AD{I|L}Y{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F} 9 2 + 81.749 0.0 0.0 7.7521 7.7521 89.476 0.0 0.0 0.0 20.145228064086 4.490925311194189 4.490925311194189 4.490925311194189 0 1.274227503252014 2.0 0.7614393726401688 1.1549471895720984 {[TV]|[{I|L}S]}AD{I|L}Y{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}AD{I|L}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[TV]|[{I|L}S]}AD{I|L}A[YR]{M(Oxidation (M))|F};{[TV]|[{I|L}S]}ADA{I|L}[YR]{M(Oxidation (M))|F};{[TV]|[{I|L}S]}AAD{I|L}[YR]{M(Oxidation (M))|F};{[TV]|[{I|L}S]}W{I|L}Y{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}AD{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}[PG]V;{[TV]|[{I|L}S]}W{I|L}Y{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}W[RP];{[TV]|[{I|L}S]}W{I|L}[RH]P{M(Oxidation (M))|F} 7.7521;7.3262;6.9386;6.3217;5.9649;5.6102;5.4038;5.1843;4.7102;4.2258 -;-;-;-;-;-;-;-;-;- 727 + 1 1.951 144429.2 1.0 5007 4435 9440 SUDHL4_400M_050219_1,9444 SUDHL4_400M_050219_1,9444,SLADLYFRA True True SLADLYFRA 51.783211 528.2798 2216515.75 9440.0 nc|ENSG00000196510|Q9UJX3-2|ANAPC7;;ENSG00000196510|ENST00000455511|ANAPC7 7.774018446604411 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9445 51.797 800.0 391740.0 25 0 30473.0 + 14843 ILGIQPPSV 9 208 462.28203188457314 922.5495108359464 2 462.2820922732353 MULTI CID FTMS 0 0 0 9440 193981.96875 0.7044415034505862 -4 0.4614944458007812 5 Unmodified _ILGIQPPSV_ ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8 70.71552829651908 0.0208223590022201 5 {I|L}{I|L}GQ{I|L}P 6 4 48.734 0.0 0.0 5.2825 0.0 0.0 0.0 298.1421981740901 298.1421981740901 18.679767852945943 0.0 0.0 0.0 0 1.0 2.0 0.0 0.2614393726401688 {I|L}{I|L}GQ{I|L}P 5.2825 - 803 1 1.951 235795.8 0.6299999952316284 5008 4435 9440 SUDHL4_400M_050219_1,9445 SUDHL4_400M_050219_1,9445,ILGIQPPSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9446 51.808 600.0 269190.0 25 0 19066.0 + 34111 SLLPQLTGA 9 143 450.2634890214007 898.5124251096014 2 450.2634460330009 MULTI CID FTMS 0 0 0 9440 189401.0625 0.3916322167126276 -4 0.4614944458007812 6 Unmodified _SLLPQLTGA_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 52.268347100219714 0.0353964759249114 5 [QP]{I|L}TV 5 5 38.218 0.0 0.0 4.2535 0.0 0.0 0.0 357.177564001724 357.177564001724 8.156753288559813 0.0 0.0 0.0 0 0.3252574989159953 1.2218487496163564 0.805462187404089 0.0 [QP]{I|L}TV 4.2535 - 501 1 1.951 126127.3 1.0 5009 4435 9440 SUDHL4_400M_050219_1,9446 SUDHL4_400M_050219_1,9446,SLLPQLTGA True True SLLPQLTGA 51.807513 450.263446033001 6948025.0 9440.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 4.487567663192749 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9447 51.816 502.0 353170.0 25 0 44783.0 + 33724 SLADDSVLERL 11 143 609.3220317226863 1216.6295105121726 2 609.3225585818291 MULTI CID FTMS 0 0 0 9440 178374.203125 1.0 0 0.0 7 Unmodified _SLADDSVLERL_ ENSG00000112159|ENST00000369393|MDN1 53.4695610476455 0.0984156443811599 5 {[TV]|[{I|L}S]}ADDSV{I|L}ER{I|L} 11 0 + 87.754 0.0 0.0 7.2128 7.2128 90.259 0.0 0.0 0.0 27.367585652254185 6.787666182477324 6.787666182477324 6.747425010840047 0 1.3737125054200234 2.0 0.75 0.0 + + {[TV]|[{I|L}S]}ADDSV{I|L}ER{I|L};{[TV]|[{I|L}S]}EGDSV{I|L}ER{I|L};{[TV]|[{I|L}S]}ADDSV{I|L}{I|L}WV;{[TV]|[{I|L}S]}EGDSV{I|L}{I|L}WV;{[TV]|[{I|L}S]}ADD{I|L}[VS]ER{I|L};{[TV]|[{I|L}S]}ADDSV{I|L}[KA][QA];{[TV]|[{I|L}S]}EGD{I|L}[VS]ER{I|L};{[TV]|[{I|L}S]}ADD{I|L}[VS]{I|L}WV;{[TV]|[{I|L}S]}EGDSV{I|L}[KA][QA];{[TV]|[{I|L}S]}EGD{I|L}[VS]{I|L}WV 7.2128;6.6582;6.6549;6.1003;5.6716;5.6079;5.117;5.1137;5.0533;4.5591 +;-;-;-;-;-;-;-;-;- + 3275 + 1 1.951 132891.2 1.0 5010 4435 9440 SUDHL4_400M_050219_1,9447 SUDHL4_400M_050219_1,9447,SLADDSVLERL True True SLADDSVLERL 51.816379 609.322558581829 1254024.0 9440.0 ENSG00000112159|ENST00000369393|MDN1 4.530215501785278 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9448 51.83 800.0 146090.0 25 0 13908.0 14118 IAVDWESL 8 153 466.74166249290175 931.4687720526036 2 466.7416869997978 MULTI CID FTMS 0 0 0 9440 170497.671875 1.0 0 0.0 8 Unmodified _IAVDWESL_ ENSG00000152894|ENST00000368226|PTPRK;ENST00000524481.5_1_6:128321419-128841710:-|nuORF;ENST00000524534.5_1_6:128384662-128841530:-|nuORF;ENST00000531050.5_1_6:128321419-128718758:-|nuORF;nc|ENSG00000152894|Q15262-3|PTPRK;nc|ENSG00000152894|Q15262-4|PTPRK;nc|ENSG00000152894|Q15262|PTPRK 22.4526382665184 0.5719518724627818 5 [{I|L}A]V 3 5 20.458 0.0 0.0 2.1963 0.0 0.0 0.0 645.2556122227785 645.2556122227785 0.8040747723590158 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + [{I|L}A]V 2.1963 + + 120 1 1.951 93698.3 0.5699999928474426 5011 4435 9440 SUDHL4_400M_050219_1,9448 SUDHL4_400M_050219_1,9448,IAVDWESL False True LAVPDMSSL 51.830196 466.741686999798 651756.1875 9440.0 ENSG00000182481|ENST00000330459|KPNA2;;ENST00000583392.1_1_17:66039031-66039124:+|nuORF;;ENST00000419546.1_1_7:88194857-88195094:-|nuORF;;ENST00000458289.2_1_4:81001192-81001915:+|nuORF -0.2785342534383138 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9449 51.834 113.0 782240.0 25 0 89613.0 + 31498 RQFDLAWQY 9 78 613.801126349668 1225.587699766136 2 613.8006469607353 MULTI CID FTMS 0 0 0 9440 142763.078125 0.5404714258419396 -1 0.0453834533691406 9 Unmodified _RQFDLAWQY_ ENSG00000175482|ENST00000312419|POLD4;ENST00000524743.1_1_11:67119998-67120510:-|nuORF;ENST00000528087.1_1_11:67120378-67120948:-|nuORF;nc|ENSG00000175482|Q9HCU8-2|POLD4 19.361941925380144 0.3125782356748823 5 {I|L}AWQY 5 4 38.003 0.0 0.0 3.1008 0.0 0.0 546.2557775830447 0.0 546.2557775830447 0.0 24.023722004121453 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 + {I|L}AWQY 3.1008 + + 85 1 1.951 70058.3 1.0 5012 4435 9440 SUDHL4_400M_050219_1,9449 SUDHL4_400M_050219_1,9449,RQFDLAWQY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9451 51.839 120.0 651440.0 25 0 94818.0 + 37889 TLWGIQKEL 9 100 544.3113776988487 1086.6082024644973 2 544.3113281130791 MULTI CID FTMS 0 0 0 9450 524975.8125 0.2708154299428495 3 -0.2107887268066406 1 Unmodified _TLWGIQKEL_ ENSG00000134333|ENST00000422447|LDHA;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA 55.50274090549119 0.0285720310785888 5 [{I|L}T][NG]{I|L}GW{I|L}T{I|L} 10 5 + 51.494 0.0 0.0 4.739 4.739 79.901 0.0 0.0 0.0 2.816179390642773 6.970792656959269 2.816179390642773 2.816179390642773 0 0.8892494821072345 2.0 0.868415180652539 0.3494850021680094 [{I|L}T][NG]{I|L}GW{I|L}T{I|L};[{I|L}A]NWKE{I|L}T{I|L};[{I|L}T][TP]S{I|L}E{I|L}T{I|L};[{I|L}A]GGWKE{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}KE{I|L}T{I|L};[{I|L}A]NKWE{I|L}T{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}QKE{I|L}T{I|L};[{I|L}A]NS{I|L}GW{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}{[VA]|[{I|L}G]}S{I|L}E{I|L}T{I|L};[{I|L}A]GGKWE{I|L}T{I|L} 4.739;4.4798;4.4729;4.2028;4.043;3.9791;3.8957;3.7548;3.7239;3.7021 -;-;-;-;-;-;-;-;-;- 694 1 1.951 67362.4 1.0 5013 4436 9450 SUDHL4_400M_050219_1,9451 SUDHL4_400M_050219_1,9451,TLWGIQKEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9452 51.843 187.0 290420.0 25 0 59739.0 + -1 IIFKMWLKL 9 68 604.3668191142004 1206.7190852952008 2 604.3672363162041 MULTI CID FTMS 0 0 0 9450 260409.703125 0.3040646441691734 3 -0.2107887268066406 2 Oxidation (M) _IIFKM(Oxidation (M))WLKL_ REV__ENST00000278616.8_1_11:108151731-108151785:+|nuORF 2.302733041254933 0.8342969208511092 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.57923 0.0 0.0 225.2312445743008 831.4001558893186 1056.6314004636197 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.57923 + + 5 + 1 1.951 44216.3 1.0 5014 4436 9450 SUDHL4_400M_050219_1,9452 SUDHL4_400M_050219_1,9452,IIFKMWLKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9453 51.857 800.0 160640.0 25 0 10556.0 + 24501 MIKGVTLGF 9 162 483.2782513506095 0 483.2780944705009 PEAK CID FTMS 0 0 0 9450 100977.28125 0.4678911317577841 -6 0.69305419921875 3 Unmodified _MIKGVTLGF_ ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF;ENST00000479477.2_1_14:59031020-59031149:+|nuORF;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000561773.1_1_15:66671752-66672088:-|nuORF 34.40172386719151 0.0892392376003579 5 {I|L}MK{I|L}GD 6 6 26.134 0.0 0.0 2.7095 0.0 0.0 222.098298500244 82.06695734195546 304.16525584219943 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 1.510574239612792 0.0 {I|L}MK{I|L}GD 2.7095 - 287 + 1 1.951 99903.8 0.9300000071525574 5015 4436 9450 SUDHL4_400M_050219_1,9453 SUDHL4_400M_050219_1,9453,MIKGVTLGF True True MIKGVTLGF 51.856513 483.278094470501 1586277.125 9450.0 ENSG00000163682|ENST00000295955|RPL9;;ENST00000479477.2_1_14:59031020-59031149:+|nuORF;;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;;ENST00000561773.1_1_15:66671752-66672088:-|nuORF;;ENST00000439124.1_1_6:64325734-64326112:-|nuORF 2.5509047905604043 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9454 51.87 800.0 75347.0 25 0 19189.0 + 29446 QLHSHLRRILP 11 89 685.411035829321 1368.807518725442 2 685.4124633669853 MULTI CID FTMS 0 0 0 9450 104744.328125 0.3094411146539565 3 -0.2107887268066406 4 Unmodified _QLHSHLRRILP_ REV__ENSG00000096070|ENST00000357641|BRPF3;REV__nc|ENSG00000096070|Q9ULD4-2|BRPF3;REV__nc|ENSG00000096070|Q9ULD4-3|BRPF3 1.3296431237094175 0.8688745925763601 5 Q 1 -1 10.744 0.0 0.0 0.78494 0.0 0.0 1222.7378451187997 0.0 1222.7378451187997 0.0 0.7443718329812299 0.0 0.0 0 0.0 0.0 0.0 0.1595680409956017 Q 0.78494 + + 31 + 1 1.951 55922.2 0.449999988079071 5016 4436 9450 SUDHL4_400M_050219_1,9454 SUDHL4_400M_050219_1,9454,QLHSHLRRILP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9455 51.877 343.0 243080.0 25 0 16451.0 + + -1 VLFPGYTHL 9 123 522.7733281386292 1043.5321033440582 2 523.7857543826103 MULTI CID FTMS 0 0 0 9450 100656.5390625 1.0 0 0.0 5 Carbamidomethyl (C) _GLC(Carbamidomethyl (C))AATLEPL_ nc|ENSG00000126522|P04424-3|ASL;ENSG00000126522|ENST00000304874|ASL;nc|ENSG00000126522|P04424-2|ASL;ENST00000487982.5_1_7:65541068-65551857:+|nuORF 14.838274106304384 0.5985701837916485 5 [{I|L}P]{M(Oxidation (M))|F}Y[PG]TH{I|L} 9 -1 + 30.549 0.0 0.0 2.9274 2.9274 54.004 0.0 0.0 0.0 7.383616240560066 1.3406733180681345 1.3406733180681345 0.0 0 0.0 0.6989700043360187 0.0 0.0 [{I|L}P]{M(Oxidation (M))|F}Y[PG]TH{I|L};[{I|L}P]{M(Oxidation (M))|F}P[YG]TH{I|L};[{I|L}P]{M(Oxidation (M))|F}PT[YG]H{I|L};[{I|L}V][Y{I|L}]P[CS]H{I|L};[{I|L}V][Y{I|L}]PDDP{I|L};[{I|L}V][Y{I|L}]PT[HC]V;[{I|L}V]{[RE]|[WV]}{[YD]|[{M(Oxidation (M))|F}M]}H{I|L};[{I|L}P]{[WT]|[RM]}{[YD]|[{M(Oxidation (M))|F}M]}H{I|L} 2.9274;2.9274;2.639;1.7502;1.5815;1.438;1.1294;0.052596 -;-;-;-;-;-;-;- 437 + 1 1.951 70899.3 1.0 5017 4436 9450 SUDHL4_400M_050219_1,9455 SUDHL4_400M_050219_1,9455,GLCAATLEPL False False VLFPGYTHL 51.87656 523.78575438261 891095.125 9450.0 nc|ENSG00000126522|P04424-3|ASL;;ENSG00000126522|ENST00000304874|ASL;;nc|ENSG00000126522|P04424-2|ASL;;ENST00000487982.5_1_7:65541068-65551857:+|nuORF 6.004066467285156 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9456 51.89 800.0 139070.0 25 0 8170.6 + 43315 WLDNPKIQL 9 145 563.8164159333189 1125.6182789334378 2 563.8159057497978 MULTI CID FTMS 0 0 0 9450 85791.4453125 0.9501994576026912 -2 0.1317520141601562 6 Unmodified _WLDNPKIQL_ ENSG00000004487|ENST00000400181|KDM1A;ENST00000481879.1_1_1:23376923-23381674:+|nuORF;nc|ENSG00000004487|O60341|KDM1A 86.33184430468982 0.0159826143231117 5 W{I|L}DNPK{I|L}Q{I|L} 9 0 + 87.755 0.0 0.0 7.7962 7.7962 93.867 0.0 0.0 0.0 55.17826474079653 13.737125054200234 13.737125054200234 9.208187539523747 0 2.0743923658886185 2.0 0.3494850021680094 0.9005149978319906 + + W{I|L}DNPK{I|L}Q{I|L};W{I|L}DGGPK{I|L}Q{I|L};W{I|L}DNPK{I|L}[AG]{I|L};W{I|L}DNPK{I|L}AAV;W{I|L}DGGPK{I|L}[AG]{I|L};W{I|L}DGGPK{I|L}AAV;W{I|L}YYK{I|L}Q{I|L};[W{I|L}]DNPK{I|L}Q{I|L};W{I|L}YYK{I|L}[AG]{I|L};W{I|L}YYK{I|L}AAV 7.7962;6.9781;6.6892;5.9821;5.875;5.1679;5.0117;4.1535;3.8999;3.1928 +;-;-;-;-;-;-;+;-;- + 1375 + 1 1.951 86628.6 0.4199999868869781 5018 4436 9450 SUDHL4_400M_050219_1,9456 SUDHL4_400M_050219_1,9456,WLDNPKIQL True True WLDNPKIQL 51.890398 563.815905749798 904510.4375 9450.0 ENST00000481879.1_1_1:23376923-23381674:+|nuORF;;ENSG00000004487|ENST00000400181|KDM1A;;nc|ENSG00000004487|O60341|KDM1A 6.81281042098999 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9457 51.9 561.0 174130.0 25 0 16127.0 40827 VLMVCCKL 8 106 454.7416809023518 907.4688088715036 2 454.7419311404228 MULTI CID FTMS 0 0 0 9450 264569.125 1.0 0 0.0 7 Unmodified _VLMVCCKL_ ENSG00000163377|ENST00000295569|TAFA4 14.581692164780916 0.6954967302934248 5 A{I|L} 2 7 28.665 0.0 0.0 3.1587 0.0 0.0 0.0 720.3255477375322 720.3255477375322 12.110506870355607 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.0 A{I|L} 3.1587 - 137 + 1 1.951 78408.0 1.0 5019 4436 9450 SUDHL4_400M_050219_1,9457 SUDHL4_400M_050219_1,9457,VLMVCCKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9458 51.915 800.0 121390.0 25 0 25418.0 19272 LEKLQKELKI 10 98 621.3931153128103 1240.7716776924206 2 621.3937255740166 MULTI CID FTMS 0 0 0 9450 127272.1171875 0.3561326232322163 1 -0.0875701904296875 8 Unmodified _LEKLQKELKI_ ENSG00000162598|ENST00000371201|C1orf87 3.5964929083625545 0.7100006075494749 5 {I|L} 1 9 9.2694 0.0 0.0 0.74706 0.0 0.0 1109.676567684411 0.0 1109.676567684411 0.0 0.1785777613326722 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.74706 + + 22 + 1 1.951 74911.0 0.5199999809265137 5020 4436 9450 SUDHL4_400M_050219_1,9458 SUDHL4_400M_050219_1,9458,LEKLQKELKI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9459 51.922 353.0 178310.0 25 0 22906.0 + 20456 LLKMIEQP 8 99 486.28417229373775 970.5537916542756 2 486.2842590212822 MULTI CID FTMS 0 0 0 9450 99871.0234375 1.0 0 0.0 9 Unmodified _LLKMIEQP_ REV__chr5:78765273-78766758|21|15.62|0.0|12.22|-|1|TE_info:Tigger18a,Tigger18a_dup408,TcMar-Tigger,DNA,acceptor,-,78764820,78765273|None,LHFPL2|7 5.230669730166228 0.792582437072536 5 TT[HK] 4 -1 13.812 0.0 0.0 1.4231 0.0 0.0 485.28828627754064 0.0 485.28828627754064 0.0 3.21634927068958 0.0 0.0 0 0.0 0.0 0.0 0.0 TT[HK] 1.4231 - 18 1 1.951 56971.1 1.0 5021 4436 9450 SUDHL4_400M_050219_1,9459 SUDHL4_400M_050219_1,9459,LLKMIEQP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9461 51.927 64.0 1276300.0 25 0 148840.0 + 45590 YVFPGVTRL 9 73 526.3001599409931 1050.5857669487862 2 526.3004638552666 MULTI CID FTMS 0 0 0 9460 573033.5625 0.7662495692814767 1 -0.0362281799316406 1 Unmodified _YVFPGVTRL_ ENSG00000160284|ENST00000291672|SPATC1L;nc|ENSG00000160284|Q9H0A9-2|SPATC1L 22.774965066869 0.2414061210083823 5 YV{M(Oxidation (M))|F}PR 5 4 69.196 0.0 0.0 6.5864 0.0 0.0 0.0 385.22101770572505 385.22101770572505 61.23712505420024 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.8494850021680094 YV{M(Oxidation (M))|F}PR 6.5864 - 81 + 1 1.951 67687.9 1.0 5022 4437 9460 SUDHL4_400M_050219_1,9461 SUDHL4_400M_050219_1,9461,YVFPGVTRL False True YVFPGVTRL 51.927043 526.300463855267 6379715.5 9460.0 nc|ENSG00000160284|Q9H0A9-2|SPATC1L;;ENSG00000160284|ENST00000291672|SPATC1L 5.931540648142497 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9462 51.93 129.0 339800.0 25 0 21549.0 + 16868 KIFDEILVNA 10 87 581.3292958390219 1160.6440387448438 2 581.3295165896416 MULTI CID FTMS 0 0 0 9460 222145.09375 0.2779034511251217 2 -0.1232185363769531 2 Unmodified _KIFDEILVNA_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant 18.373094154950223 0.5392593366289069 5 {NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}{I|L}K{I|L}V{[QG]|[NA]} 10 4 + 51.616 0.0 0.0 4.4472 4.4472 57.585 0.0 0.0 0.0 4.884381005764311 30.435640094837986 4.884381005764311 0.0 0 0.9247425010840048 0.0 0.0 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}{I|L}K{I|L}V{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}K{I|L}{I|L}V{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}K{I|L}V{I|L}{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}{I|L}KV{I|L}{[QG]|[NA]};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}{I|L}K[NG]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}K{I|L}[NG]{I|L}{I|L};{[NV]|[RG]}[YQ]K{I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{[NV]|[RG]}[YQ]{I|L}K{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};{NN|[MP]|[D{I|L}]|[EV]}E{[VA]|[{I|L}G]}{I|L}{I|L}Y{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}E{M(Oxidation (M))|F}{I|L}[W{I|L}]{I|L}{I|L} 4.4472;4.4472;3.8219;3.8219;2.0349;2.0349;1.8381;1.8381;1.4744;1.171 -;-;-;-;-;-;-;-;-;- 197 1 1.951 38276.4 1.0 5023 4437 9460 SUDHL4_400M_050219_1,9462 SUDHL4_400M_050219_1,9462,KIFDEILVNA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9463 51.933 174.0 338170.0 25 0 67232.0 + -1 GCDKKILVF 9 84 561.3041855468642 1120.5938181605284 2 561.3051025271416 MULTI CID FTMS 0 0 0 9460 217518.375 0.5139117295316135 -2 0.1739387512207031 3 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))GC(Carbamidomethyl (C))DKKILVF_ REV__ENST00000508125.1_1_5:122737431-122737524:-|nuORF 25.399314129420983 0.2080152500878129 5 [AG]MDQ{I|L}K{I|L}{M(Oxidation (M))|F}V 10 -1 + 47.803 0.0 0.0 4.2659 4.2659 76.778 0.0 0.0 0.0 1.494218307181626 9.699915470362017 1.494218307181626 1.494218307181626 0 0.7429928190999391 0.958607314841775 0.6307196863200843 0.75 [AG]MDQ{I|L}K{I|L}{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DQ{I|L}K{I|L}{M(Oxidation (M))|F}V;[AG]MD{I|L}KQ{I|L}{M(Oxidation (M))|F}V;[AG]DMQ{I|L}K{I|L}{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D{I|L}KQ{I|L}{M(Oxidation (M))|F}V;[AG]{I|L}KDMQ{I|L}{M(Oxidation (M))|F}V;[AG]MD{I|L}QK{I|L}{M(Oxidation (M))|F}V;{[QD]|[EN]|[WG]|[KD]|[RS]}MQ{I|L}K{I|L}{M(Oxidation (M))|F}V;[AG]DM{I|L}KQ{I|L}{M(Oxidation (M))|F}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D{I|L}QK{I|L}{M(Oxidation (M))|F}V 4.2659;4.1325;4.1288;4.049;3.9955;3.9717;3.9717;3.9157;3.9119;3.8383 -;-;-;-;-;-;-;-;-;- 316 1 1.951 49750.7 1.0 5024 4437 9460 SUDHL4_400M_050219_1,9463 SUDHL4_400M_050219_1,9463,GCDKKILVF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9464 51.938 242.0 275540.0 25 0 60423.0 + 20383 LLGPRLVLA 9 80 476.3210213870838 950.6274898409677 2 476.3214294314384 MULTI CID FTMS 0 0 0 9460 182173.703125 0.0137094269471419 6 -0.4537315368652344 4 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 46.020951573049366 0.0490941689151868 5 {I|L}{I|L}G 3 6 46.995 0.0 0.0 4.9436 0.0 0.0 0.0 664.4159029596311 664.4159029596311 4.978021091811229 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}{I|L}G 4.9436 + + 77 + 1 1.951 59774.9 1.0 5025 4437 9460 SUDHL4_400M_050219_1,9464 SUDHL4_400M_050219_1,9464,LLGPRLVLA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9465 51.946 501.0 287920.0 25 0 30506.0 11373 GGCVPDFL 8 154 404.1895397695248 0 404.1874572634697 PEAK CID FTMS 0 0 0 9460 168542.015625 0.5094707038578251 -2 0.1739387512207031 5 Unmodified _GGCVPDFL_ ENSG00000123411|ENST00000547167|IKZF4;ENST00000547668.5_1_12:56415277-56418480:+|nuORF 10.183394434864962 0.5394990767616434 5 D 1 7 9.732 0.0 0.0 1.2069 0.0 0.0 572.2636640343636 116.05103479556874 688.3146988299324 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 + D 1.2069 + + 51 + 1 1.951 114191.8 1.0 5026 4437 9460 SUDHL4_400M_050219_1,9465 SUDHL4_400M_050219_1,9465,GGCVPDFL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9466 51.953 391.0 264470.0 25 0 13245.0 -1 0 104 1002.9758301449424 2003.937107356685 2 1002.976916491985 MULTI CID FTMS 0 0 0 9460 154040.921875 0.4519548685979487 -2 0.1739387512207031 6 5 [NP]{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}QS{I|L}[MN] 17 -1 + 80.847 0.0 0.0 4.0344 4.0344 80.922 0.0 0.0 0.0 3.933861108251492 41.57258516991608 3.933861108251492 6.020599913279625 0 0.0 1.0 0.0 1.341129063296272 [NP]{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}QS{I|L}[MN];[NP]VQEEQRDG{M(Oxidation (M))|F}{I|L}QS{I|L}[MN];[NP]{I|L}NEEQ[VG]DG{M(Oxidation (M))|F}{I|L}QS{I|L}[MN];[NP]{I|L}GGEEQRDG{M(Oxidation (M))|F}{I|L}QS{I|L}[MN];[NP]{I|L}NEE[AG]RDG{M(Oxidation (M))|F}{I|L}QS{I|L}[MN];[NP]{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}[AG]S{I|L}[MN];[NP]{I|L}NEEQRDG{M(Oxidation (M))|F}{I|L}Q[YG][QP];[NP]V[AG]EEQRDG{M(Oxidation (M))|F}{I|L}QS{I|L}[MN];[NP]VQEEQ[VG]DG{M(Oxidation (M))|F}{I|L}QS{I|L}[MN];[NP]VQEEQRDG{M(Oxidation (M))|F}{I|L}[AG]S{I|L}[MN] 4.0344;3.734;3.5853;3.5853;3.5853;3.5853;3.3113;3.2849;3.2849;3.2849 -;-;-;-;-;-;-;-;-;- 9892 1 1.951 72925.3 1.0 5027 4437 9460 SUDHL4_400M_050219_1,9466 SUDHL4_400M_050219_1,9466, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9467 51.958 231.0 331720.0 25 0 43806.0 + 35844 SVLDQKILL 9 97 514.8228771166278 1027.6312013000554 2 514.8217040896416 MULTI CID FTMS 0 0 0 9460 138424.234375 0.3752484670944175 -2 0.1739387512207031 7 Unmodified _SVLDQKILL_ ENSG00000142207|ENST00000382751|URB1 63.960520009940105 0.0238892913700936 5 [VS]{I|L}{[QG]|[NA]}{I|L}{I|L}VS{I|L} 10 4 + 80.111 0.0 0.0 7.7957 7.7957 88.446 0.0 0.0 0.0 11.41650614351775 10.739087409443188 10.739087409443188 3.4691001300805624 0 1.1421590589602533 2.0 0.805462187404089 0.0 [VS]{I|L}{[QG]|[NA]}{I|L}{I|L}VS{I|L};[VS]{I|L}{[QG]|[NA]}{I|L}[VS]{I|L}{I|L};[VS]{[QG]|[NA]}{I|L}{I|L}{I|L}VS{I|L};[VS]{I|L}{[QS]|[NT]}R{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QK{I|L}{I|L}VS{I|L};[VS]{[QG]|[NA]}{I|L}{I|L}[VS]{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}[VS]{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QK{I|L}[VS]{I|L}{I|L};[VS]{I|L}DQK{I|L}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}K{I|L}W{I|L}{I|L} 7.7957;7.4581;6.9609;6.8131;6.6847;6.6233;6.5805;6.3472;6.085;6.0389 -;-;-;-;-;-;-;-;+;- + 1354 1 1.951 63743.5 1.0 5028 4437 9460 SUDHL4_400M_050219_1,9467 SUDHL4_400M_050219_1,9467,SVLDQKILL True True SVLDQKILL 51.957828 514.821704089642 1917711.125 9460.0 ENSG00000142207|ENST00000382751|URB1 2.226589481035868 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9469 51.974 800.0 158510.0 25 0 14277.0 -1 KEEMDEAGNK 10 166 583.751735558134 1165.488918183068 2 583.7531005740166 MULTI CID FTMS 0 0 0 9468 190535.984375 0.3002369286678025 4 -0.3540229797363281 1 Oxidation (M) _KEEM(Oxidation (M))DEAGNK_ ENSG00000140750|ENST00000289968|ARHGAP17;nc|ENSG00000140750|Q68EM7-2|ARHGAP17;nc|ENSG00000140750|Q68EM7-4|ARHGAP17;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;nc|ENSG00000140750|Q68EM7-6|ARHGAP17 16.149105407346934 0.5765757077271437 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GA{[C(Carbamidomethyl (C))E]|[WC]}CWA{I|L} 10 -1 + 44.359 0.0 0.0 3.806 3.806 75.502 0.0 0.0 0.0 7.70229077215383 23.46139906441404 7.70229077215383 1.3380312008851547 0 1.274227503252014 0.8538719643217619 0.2614393726401688 0.1923877696554315 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GA{[C(Carbamidomethyl (C))E]|[WC]}CWA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GA{[C(Carbamidomethyl (C))E]|[WC]}WCA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GA{[C(Carbamidomethyl (C))E]|[WC]}CQE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{[C(Carbamidomethyl (C))E]|[WC]}CWA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{[C(Carbamidomethyl (C))E]|[WC]}WCA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GA{[C(Carbamidomethyl (C))E]|[WC]}C{[DA]|[EG]}A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Q{[C(Carbamidomethyl (C))E]|[WC]}CQE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GA{[C(Carbamidomethyl (C))E]|[WC]}{[DA]|[EG]}CA{I|L};[WQ]A{[C(Carbamidomethyl (C))E]|[WC]}CWA{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GA[QP]{[{M(Oxidation (M))|F}C]|[YS]}CA{I|L} 3.806;3.6912;3.5511;3.2456;3.1308;3.0197;2.9907;2.9049;2.8645;2.8301 -;-;-;-;-;-;-;-;-;- 1395 1 1.951 100954.9 0.4900000095367431 5029 4438 9468 SUDHL4_400M_050219_1,9469 SUDHL4_400M_050219_1,9469,KEEMDEAGNK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9470 51.988 800.0 291310.0 25 0 50097.0 + 19501 LFLPEIFII 9 168 552.8368585276862 1103.6591641221723 2 552.8371459841728 MULTI CID FTMS 0 0 0 9468 162634.875 0.554926733646223 -1 0.0362281799316406 2 Unmodified _LFLPEIFII_ ENST00000570455.1_1_17:6538276-6538423:-|nuORF 89.42679046578446 0.015225546354407 5 {[QN]|[E{I|L}]|[KN]}QKT{M(Oxidation (M))|F}{I|L}{I|L}{I|L} 9 6 + 83.835 0.0 0.0 7.5961 7.5961 86.281 0.0 0.0 0.0 1.7760977738858514 16.478174818886373 1.7760977738858514 1.7760977738858514 0 0.805462187404089 0.958607314841775 1.416386562212267 0.5866968715561641 {[QN]|[E{I|L}]|[KN]}QKT{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KT{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}QKT{I|L}{M(Oxidation (M))|F}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KT{I|L}{M(Oxidation (M))|F}{I|L}{I|L};[AG]E{I|L}KT{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{I|L}{I|L}ME{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[AG]KT{M(Oxidation (M))|F}{I|L}{I|L}{I|L};[Q{I|L}]EKT{M(Oxidation (M))|F}{I|L}{I|L}{I|L};[AG]E{I|L}KT{I|L}{M(Oxidation (M))|F}{I|L}{I|L};{I|L}{I|L}ME{I|L}{I|L}{M(Oxidation (M))|F}{I|L}{I|L} 7.5961;7.4351;7.2834;7.1225;6.8862;6.8111;6.7617;6.7567;6.5736;6.4984 -;-;-;-;-;-;-;-;-;- 6320 1 1.951 176050.0 0.5799999833106995 5030 4438 9468 SUDHL4_400M_050219_1,9470 SUDHL4_400M_050219_1,9470,LFLPEIFII True True FLTKQEILL 51.988047 552.837145984173 1695695.375 9468.0 ENSG00000185043|ENST00000328649|CIB1;;nc|ENSG00000185043|Q99828-2|CIB1 3.887289921442668 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9471 52.002 800.0 125760.0 25 0 11467.0 9066 FFAFLLGHIL 10 139 589.3433686199969 1176.6721843067935 2 589.3430053591728 MULTI CID FTMS 0 0 0 9468 97973.2265625 1.0 0 0.0 3 Unmodified _FFAFLLGHIL_ ENSG00000221968|ENST00000278829|FADS3;ENST00000414624.6_1_11:61645294-61658904:-|nuORF 4.3292370932331545 0.7066112369704343 5 [HD]{M(Oxidation (M))|F}{I|L}{I|L}S 6 7 17.625 0.0 0.0 1.4978 0.0 0.0 0.0 461.3083286761875 461.3083286761875 3.6451625318508754 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [HD]{M(Oxidation (M))|F}{I|L}{I|L}S 1.4978 - 352 1 1.951 81405.1 0.4300000071525574 5031 4438 9468 SUDHL4_400M_050219_1,9471 SUDHL4_400M_050219_1,9471,FFAFLLGHIL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9472 52.016 800.0 180520.0 25 0 11342.0 + 1681 ALPEDLVEV 9 147 492.7658280754066 983.5171032176132 2 492.7664062380791 MULTI CID FTMS 0 0 0 9468 84591.9375 0.407684973700593 -1 0.0362281799316406 4 Unmodified _ALPEDLVEV_ ENSG00000102024|ENST00000355899|PLS3;ENSG00000136167|ENST00000323076|LCP1;nc|ENSG00000102024|P13797-2|PLS3;nc|ENSG00000102024|P13797-3|PLS3;nc|ENSG00000136167|P13796-2|LCP1 34.10243960390752 0.1078313939113124 5 [EP]D{I|L}VA{I|L}EV 9 4 + 39.86 0.0 0.0 4.0528 4.0528 76.302 0.0 0.0 0.0 1.549471895720984 1.549471895720984 1.549471895720984 1.549471895720984 0 0.6549471895720985 0.744727494896694 0.0 0.0 [EP]D{I|L}VA{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}AVAHEV;{NN|[MP]|[D{I|L}]|[EV]}[EP]VA{I|L}EV;[{M(Oxidation (M))|F}V]{I|L}AVAHD{I|L};[EP]D{I|L}AV{I|L}EV;[EP]D{I|L}A{I|L}VEV;[{M(Oxidation (M))|F}V]{I|L}VAAHEV;[{M(Oxidation (M))|F}V]V{I|L}AAHEV;{NN|[MP]|[D{I|L}]|[EV]}V[EP]A{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[EP]A{I|L}VEV 4.0528;3.8953;3.4597;3.3216;3.1346;3.1346;2.9771;2.9771;2.9746;2.5415 -;-;-;-;-;-;-;-;-;- 730 1 1.951 109255.5 0.3799999952316284 5032 4438 9468 SUDHL4_400M_050219_1,9472 SUDHL4_400M_050219_1,9472,ALPEDLVEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9473 52.03 800.0 134350.0 25 0 5760.3 -1 0 133 881.9102103631436 0 881.9080078005791 PEAK CID FTMS 0 0 0 9468 126701.0859375 0.921242915182598 -1 0.0362281799316406 5 5 EY{M(Oxidation (M))|F}ANQQA 8 -1 62.829 0.0 0.0 3.5662 0.0 0.0 230.182157575388 577.2016982299405 807.3838558053285 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 2.4604093769761874 EY{M(Oxidation (M))|F}ANQQA 3.5662 - 4896 + 1 1.951 77149.1 0.5199999809265137 5033 4438 9468 SUDHL4_400M_050219_1,9473 SUDHL4_400M_050219_1,9473, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9474 52.045 800.0 228650.0 25 0 66993.0 + 34092 SLLGSSLVAL 10 136 480.2919935096692 958.5694340861384 2 480.2921630740166 MULTI CID FTMS 0 0 0 9468 104318.4765625 0.0474361996930834 7 -0.5434799194335938 6 Unmodified _SLLGSSLVAL_ ENSG00000110446|ENST00000227880|SLC15A3 56.17704186161178 0.0466144807663799 5 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 7 4 47.738 0.0 0.0 4.9801 0.0 0.0 0.0 328.18624917324763 328.18624917324763 34.97359371331515 0.0 0.0 0.0 0 1.3807196863200843 2.0 0.6139829889124311 0.0 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 4.9801 - 381 1 1.951 141642.5 0.4399999976158142 5034 4438 9468 SUDHL4_400M_050219_1,9474 SUDHL4_400M_050219_1,9474,SLLGSSLVAL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9476 52.051 112.0 306550.0 25 0 31537.0 + 9732 FLYSDEVQI 9 68 557.2766120635862 1112.5386711939725 2 557.2767822146416 MULTI CID FTMS 0 0 0 9475 266762.28125 0.6242097558264695 3 -0.2670326232910156 1 Unmodified _FLYSDEVQI_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;nc|ENSG00000064726|Q9H0C5-2|BTBD1 13.50788311687929 0.4710407108020397 5 Q{I|L} 2 7 15.802 0.0 0.0 1.4204 0.0 0.0 853.3848453656504 0.0 853.3848453656504 0.0 4.542921487676816 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 + Q{I|L} 1.4204 + + 53 + 1 1.947 33525.3 1.0 5035 4439 9475 SUDHL4_400M_050219_1,9476 SUDHL4_400M_050219_1,9476,FLYSDEVQI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9477 52.053 98.0 361180.0 25 0 26232.0 + 34112 SLLPQLTGA 9 63 450.2634890214007 898.5124251096014 2 450.2635070681572 MULTI CID FTMS 0 0 0 9475 483619.71875 1.0 0 0.0 2 Unmodified _SLLPQLTGA_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 24.020572477871973 0.2255576514309169 5 {[TV]|[{I|L}S]}{I|L} 3 6 27.192 0.0 0.0 3.0263 0.0 0.0 0.0 582.287454977042 582.287454977042 5.368931070804592 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[TV]|[{I|L}S]}{I|L} 3.0263 + + 115 1 1.947 32968.2 1.0 5036 4439 9475 SUDHL4_400M_050219_1,9477 SUDHL4_400M_050219_1,9477,SLLPQLTGA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9478 52.056 117.0 748620.0 25 0 115100.0 + 25714 NIIELVHQV 9 101 532.8081287182677 1063.6017045033352 2 532.8090087771416 MULTI CID FTMS 0 0 0 9475 405640.28125 0.6485075894512073 -2 0.1232185363769531 3 Unmodified _NIIELVHQV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 56.17704186161178 0.0281986971544335 5 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHN{I|L} 9 2 + 71.102 0.0 0.0 6.685 6.685 85.384 0.0 0.0 0.0 27.147642715192504 2.688453122925808 2.688453122925808 2.688453122925808 0 0.8494850021680094 2.0 0.3807196863200844 0.5189301784845296 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHQV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EV{I|L}HN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EV{I|L}HQV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VH[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EV{I|L}HGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EV{I|L}H[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}[{M(Oxidation (M))|F}V]H[KG];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}H[{M(Oxidation (M))|F}V]H[KG] 6.685;6.4322;5.9224;5.6697;5.3314;5.0786;4.4823;4.2295;3.8155;3.6649 -;+;-;-;-;-;-;-;-;- + 569 + 1 1.947 72187.1 1.0 5037 4439 9475 SUDHL4_400M_050219_1,9478 SUDHL4_400M_050219_1,9478,NIIELVHQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9479 52.058 98.0 425470.0 25 0 24263.0 + 10191 FQDPVPLTV 9 81 508.2764581024044 1014.5383632716088 2 508.2763244509697 MULTI CID FTMS 0 0 0 9475 359410.53125 0.2718490935698114 -5 0.3425407409667969 4 Unmodified _FQDPVPLTV_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 27.628801355627647 0.1796483985696185 5 [{I|L}P]T{M(Oxidation (M))|F}Q 5 7 29.833 0.0 0.0 2.9405 0.0 0.0 0.0 425.23964201843154 425.23964201843154 13.634993639681312 0.0 0.0 0.0 0 0.3807196863200844 1.3010299956639813 0.3807196863200844 0.0 [{I|L}P]T{M(Oxidation (M))|F}Q 2.9405 - 227 1 1.947 36836.5 1.0 5038 4439 9475 SUDHL4_400M_050219_1,9479 SUDHL4_400M_050219_1,9479,FQDPVPLTV False True FQDPVPLTV 52.057747 508.27632445097 17686812.0 9475.0 nc|ENSG00000122779|O15164-2|TRIM24;;ENSG00000122779|ENST00000343526|TRIM24 6.788266499837239 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9480 52.06 123.0 331960.0 25 0 52716.0 + 14844 ILGIQPPSV 9 67 462.28203188457314 922.5495108359464 2 462.2817870974541 MULTI CID FTMS 0 0 0 9475 275369.875 1.0 0 0.0 5 Unmodified _ILGIQPPSV_ ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8 36.04419817259434 0.0971720506436186 5 {I|L}{I|L}GD 4 6 38.984 0.0 0.0 4.2257 0.0 0.0 0.0 521.309599554315 521.309599554315 21.09189699011424 0.0 0.0 0.0 0 0.5 2.0 0.3807196863200844 0.0 {I|L}{I|L}GD 4.2257 - 79 1 1.947 38969.7 1.0 5039 4439 9475 SUDHL4_400M_050219_1,9480 SUDHL4_400M_050219_1,9480,ILGIQPPSV True True ILGIQPPSV 52.060278 462.281787097454 3914359.25 9475.0 nc|ENSG00000213079|Q9UPN6-2|SCAF8;;ENSG00000213079|ENST00000367178|SCAF8 5.664060592651367 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9481 52.065 228.0 216510.0 25 0 41976.0 + 27630 PLGLISSLA 9 80 435.76812588479896 869.521698836398 2 435.7683898806572 MULTI CID FTMS 0 0 0 9475 203272.71875 0.2030222527345795 4 -0.3305130004882812 6 Unmodified _PLGLISSLA_ nc|ENSG00000090861|P49588-2|AARS1 20.871210003555333 0.2717241269066626 5 [{I|L}P]ASPA 6 5 21.348 0.0 0.0 2.4552 0.0 0.0 0.0 330.2048402761042 330.2048402761042 6.375175252488248 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [{I|L}P]ASPA 2.4552 - 124 1 1.947 46339.6 1.0 5040 4439 9475 SUDHL4_400M_050219_1,9481 SUDHL4_400M_050219_1,9481,PLGLISSLA False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 9482 52.074 551.0 179750.0 25 0 22798.0 + 14616 IIHDFPQFY 9 106 590.2953242751292 1178.5760956170584 2 590.2959472537041 MULTI CID FTMS 0 0 0 9475 106923.03125 0.9702253356939106 -1 0.0869903564453125 7 Unmodified _IIHDFPQFY_ ENSG00000106399|ENST00000223129|RPA3 36.12702656103203 0.0967173616627612 5 [HD]{M(Oxidation (M))|F}{I|L}{I|L}PQ{M(Oxidation (M))|F}Y 9 4 + 61.38 0.0 0.0 5.208 5.208 85.401 0.0 0.0 0.0 9.44968960007344 52.55790193311077 9.44968960007344 7.3290220443144705 0 1.1989700043360187 0.0 0.3807196863200844 0.0 [HD]{M(Oxidation (M))|F}{I|L}{I|L}PQ{M(Oxidation (M))|F}Y;[HD]{I|L}{I|L}{M(Oxidation (M))|F}PQ{M(Oxidation (M))|F}Y;[HD]{M(Oxidation (M))|F}{I|L}{I|L}P[AG]{M(Oxidation (M))|F}Y;[HD]{I|L}{M(Oxidation (M))|F}{I|L}PQ{M(Oxidation (M))|F}Y;[QP][RP]{M(Oxidation (M))|F}PQ{M(Oxidation (M))|F}Y;[HD]{I|L}{I|L}{M(Oxidation (M))|F}P[AG]{M(Oxidation (M))|F}Y;[HD]{I|L}{M(Oxidation (M))|F}{I|L}P[AG]{M(Oxidation (M))|F}Y;[HD]{M(Oxidation (M))|F}{I|L}[QP]{I|L}{M(Oxidation (M))|F}Y;[QP]{M(Oxidation (M))|F}[RP]PQ{M(Oxidation (M))|F}Y;[QP][RP]{M(Oxidation (M))|F}P[AG]{M(Oxidation (M))|F}Y 5.208;4.5861;4.4267;4.3307;4.0603;3.8048;3.5494;3.4904;3.3432;3.279 -;-;-;-;-;-;-;-;-;- 443 1 1.947 81693.9 1.0 5041 4439 9475 SUDHL4_400M_050219_1,9482 SUDHL4_400M_050219_1,9482,IIHDFPQFY True True IIHDFPQFY 52.074232 590.295947253704 1071752.625 9475.0 ENSG00000106399|ENST00000223129|RPA3 7.387975692749023 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9483 52.082 454.0 181100.0 25 0 20272.0 37690 TLNQLGIVI 9 120 485.7999614576871 0 485.8005554080009 PEAK CID FTMS 0 0 0 9475 98102.2890625 1.0 0 0.0 8 Unmodified _TLNQLGIVI_ ENSG00000173262|ENST00000431042|SLC2A14;nc|ENSG00000173262|Q8TDB8-4|SLC2A14;nc|ENSG00000173262|Q8TDB8-5|SLC2A14;nc|ENSG00000173262|Q8TDB8|SLC2A14 30.63653989081413 0.1077493867305487 5 V{I|L}[RN][DG]V 7 5 18.715 0.0 0.0 1.9302 0.0 0.0 131.09649166361788 82.06694971256093 213.1634413761788 0.0 0.0 0.0 0.0 0 0.6505149978319906 0.0 0.3494850021680094 0.75 V{I|L}[RN][DG]V 1.9302 - 91 + 1 1.947 67496.8 1.0 5042 4439 9475 SUDHL4_400M_050219_1,9483 SUDHL4_400M_050219_1,9483,TLNQLGIVI True False KLDVGNIVL 52.082284 485.800555408001 766590.5625 9475.0 ENSG00000103257|ENST00000261622|SLC7A5 0.1776951551437378 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9484 52.091 481.0 114660.0 25 0 11147.0 + 40628 VLDDNKLLTL 10 101 572.3345547418105 1142.654556550421 2 572.3337280154228 MULTI CID FTMS 0 0 0 9475 96850.265625 1.0 0 0.0 9 Unmodified _VLDDNKLLTL_ ENSG00000197102|ENST00000360184|DYNC1H1 39.94969957227396 0.1580982266129622 5 [{I|L}V]DEE{I|L}V{I|L}[{I|L}T] 10 4 + 56.431 0.0 0.0 4.9385 4.9385 77.222 0.0 0.0 0.0 21.020599913279625 0.2422750325201406 0.2422750325201406 0.2422750325201406 0 0.9247425010840048 2.0 0.7059771852360797 0.0 [{I|L}V]DEE{I|L}V{I|L}[{I|L}T];[{I|L}V]DEE{I|L}T{I|L}[{I|L}V];{NN|[MP]|[D{I|L}]|[EV]}VEE{I|L}V{I|L}[{I|L}T];{NN|[MP]|[D{I|L}]|[EV]}VEE{I|L}T{I|L}[{I|L}V];[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[EP]V{I|L}[{I|L}T];[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[EP]T{I|L}[{I|L}V];[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V[EP]{I|L}[{I|L}T];[VP][Y{I|L}][EP]V{I|L}[{I|L}T];[VP][Y{I|L}][EP]T{I|L}[{I|L}V] 4.9385;4.9173;3.0989;3.0777;2.9644;2.9432;2.4375;0.16479;0.14359 -;-;-;-;-;-;-;-;- 115 1 1.947 49985.4 1.0 5043 4439 9475 SUDHL4_400M_050219_1,9484 SUDHL4_400M_050219_1,9484,VLDDNKLLTL False True VLDDNKLLTL 52.090792 572.333728015423 558034.4375 9475.0 ENSG00000197102|ENST00000360184|DYNC1H1 -0.0796790321667989 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9485 52.093 75.0 502660.0 25 0 30041.0 + 34243 GLDIPTVQV 9 73 471.2691363825657 940.5237198319312 2 471.2690307497978 MULTI CID FTMS 0 0 0 9475 397155.8125 0.2887254681905923 -3 0.2107887268066406 10 Unmodified _SLPTLPSQV_ ENSG00000105671|ENST00000247003|DDX49;ENST00000601772.1_1_19:19035054-19035967:+|nuORF 39.957323273325 0.0756908302845263 5 {[VA]|[{I|L}G]}D{I|L} 4 7 32.792 0.0 0.0 3.4865 0.0 0.0 0.0 539.2842843673407 539.2842843673407 10.299533125180565 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[VA]|[{I|L}G]}D{I|L} 3.4865 - 88 1 1.947 35591.3 1.0 5044 4439 9475 SUDHL4_400M_050219_1,9485 SUDHL4_400M_050219_1,9485,SLPTLPSQV True False GLDIPTVQV 52.092517 471.269030749798 19738516.0 9475.0 ENSG00000105671|ENST00000247003|DDX49;;ENST00000601772.1_1_19:19035054-19035967:+|nuORF 6.99142583211263 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9486 52.096 169.0 280820.0 25 0 20187.0 + 44024 YIHNILYEV 9 85 582.3088542414076 1162.6031555496152 2 582.3084594607353 MULTI CID FTMS 0 0 0 9475 197502.328125 1.0 0 0.0 11 Unmodified _YIHNILYEV_ ENSG00000170456|ENST00000389082|DENND5B;nc|ENSG00000170456|Q6ZUT9-2|DENND5B;nc|ENSG00000170456|Q6ZUT9-3|DENND5B;nc|ENSG00000170456|Q6ZUT9-4|DENND5B 34.10243960390752 0.1078313939113124 5 [HN]{I|L}Y{I|L}{I|L}YEV 9 4 + 34.261 0.0 0.0 2.947 2.947 75.414 0.0 0.0 0.0 0.915149811213503 20.282052994540017 0.915149811213503 2.6760624017703165 0 0.4929928190999391 0.0 0.0 0.0 [HN]{I|L}Y{I|L}{I|L}YEV;{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}N{I|L}{I|L}YEV;[HN]{I|L}Y{I|L}Y{I|L}EV;[HN]{I|L}{I|L}Y{I|L}YEV;{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}N{I|L}Y{I|L}EV;[HN]{I|L}{I|L}YY{I|L}EV;[{M(Oxidation (M))|F}V]Y{I|L}Y[KT]MV;[{M(Oxidation (M))|F}V]{I|L}YY[KT]MV;{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]}GG{I|L}{I|L}YEV;[{M(Oxidation (M))|F}T][KT]Y{I|L}YEV 2.947;2.7168;2.688;2.688;2.4579;2.4291;2.3716;2.1126;1.9285;1.7445 -;-;-;-;-;-;-;-;-;- 167 1 1.947 41776.8 1.0 5045 4439 9475 SUDHL4_400M_050219_1,9486 SUDHL4_400M_050219_1,9486,YIHNILYEV True True YIHNILYEV 52.095834 582.308459460735 1177224.375 9475.0 nc|ENSG00000170456|Q6ZUT9-4|DENND5B;;nc|ENSG00000170456|Q6ZUT9-3|DENND5B;;ENSG00000170456|ENST00000389082|DENND5B;;nc|ENSG00000170456|Q6ZUT9-2|DENND5B 6.687002658843994 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9487 52.104 445.0 108350.0 25 0 8697.6 -1 0 67 966.472964768136 1930.931376603072 2 966.9745971560478 MULTI CID FTMS 0 0 0 9475 127765.65625 1.0 0 0.0 12 5 [MN][{I|L}P]{I|L}NAQQS 10 -1 32.681 0.0 0.0 1.6925 0.0 0.0 0.0 831.3924654596311 831.3924654596311 11.131134461430534 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3807196863200844 0.0 [MN][{I|L}P]{I|L}NAQQS 1.6925 - 673 + 1 1.947 41835.4 1.0 5046 4439 9475 SUDHL4_400M_050219_1,9487 SUDHL4_400M_050219_1,9487, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9488 52.111 320.0 198990.0 25 0 21229.0 + 46 AAASHFFNL 9 97 489.2444765838215 976.474400234443 2 489.2459899783134 MULTI CID FTMS 0 0 0 9475 101630.9453125 1.0 0 0.0 13 Unmodified _AAASHFFNL_ ENSG00000122550|ENST00000339077|KLHL7;nc|ENSG00000122550|Q8IXQ5-2|KLHL7;nc|ENSG00000122550|Q8IXQ5-3|KLHL7;nc|ENSG00000122550|Q8IXQ5-4|KLHL7;nc|ENSG00000122550|Q8IXQ5-5|KLHL7 23.1484247019978 0.2366544122328345 5 S{I|L} 2 7 17.034 0.0 0.0 1.7444 0.0 0.0 758.3474756512384 0.0 758.3474756512384 0.0 6.756435321512111 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 S{I|L} 1.7444 - 190 + 1 1.947 55919.7 1.0 5047 4439 9475 SUDHL4_400M_050219_1,9488 SUDHL4_400M_050219_1,9488,AAASHFFNL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9490 52.117 162.0 393650.0 25 0 63291.0 37456 TLEALWKNL 9 101 544.3113776988487 1086.6082024644973 2 544.3144409060478 MULTI CID FTMS 0 0 0 9489 176715.171875 0.0911607622851246 7 -0.5681343078613281 1 Unmodified _TLEALWKNL_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4-7|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 21.74664581756881 0.2544899275067181 5 [{I|L}T]{M(Oxidation (M))|F}{I|L}K{I|L}E 7 5 43.249 0.0 0.0 3.9802 0.0 0.0 0.0 239.10427271060783 239.10427271060783 23.556066401185163 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.4247425010840047 0.0 [{I|L}T]{M(Oxidation (M))|F}{I|L}K{I|L}E 3.9802 - 312 + 1 1.947 54409.5 1.0 5048 4440 9489 SUDHL4_400M_050219_1,9490 SUDHL4_400M_050219_1,9490,TLEALWKNL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9491 52.13 800.0 177180.0 25 0 11425.0 + 31499 RQFDLAWQY 9 130 613.801126349668 1225.587699766136 2 613.8011962771416 MULTI CID FTMS 0 0 0 9489 20197.15234375 0.0764622328723933 4 -0.2831687927246094 2 Unmodified _RQFDLAWQY_ ENSG00000175482|ENST00000312419|POLD4;ENST00000524743.1_1_11:67119998-67120510:-|nuORF;ENST00000528087.1_1_11:67120378-67120948:-|nuORF;nc|ENSG00000175482|Q9HCU8-2|POLD4 19.361941925380144 0.3125782356748823 5 [{I|L}V]AV{I|L}[C(Carbamidomethyl (C))S]{[CA]|SS}QY 11 7 + 47.465 0.0 0.0 3.8728 3.8728 81.248 0.0 0.0 0.0 9.787885441787587 17.799410666261398 9.787885441787587 6.91001074664743 0 0.5994850021680094 1.0 0.0 0.0 [{I|L}V]AV{I|L}[C(Carbamidomethyl (C))S]{[CA]|SS}QY;[{I|L}V]N[W{M(Oxidation (M))|F}]AWQY;[{I|L}V]A{I|L}V[C(Carbamidomethyl (C))S]{[CA]|SS}QY;[{I|L}V]{I|L}G{I|L}[C(Carbamidomethyl (C))S]{[CA]|SS}QY;{[VA]|[{I|L}G]}{I|L}V{I|L}[C(Carbamidomethyl (C))S]{[CA]|SS}QY;[{I|L}V]N[W{M(Oxidation (M))|F}]AW[AG]Y;[{I|L}V]A{I|L}[WC(Carbamidomethyl (C))]{[CA]|SS}QY;[{I|L}V]GG[W{M(Oxidation (M))|F}]AWQY;[{I|L}V]AS[QP]{M(Oxidation (M))|F}{[CA]|SS}QY;{I|L}{I|L}GV{I|L}[C(Carbamidomethyl (C))S]{[CA]|SS}QY 3.8728;3.309;3.0943;3.0231;2.8447;2.5577;2.5577;2.5577;2.4464;2.2783 -;-;-;-;-;-;-;-;-;- 515 1 1.947 106484.3 0.6100000143051147 5049 4440 9489 SUDHL4_400M_050219_1,9491 SUDHL4_400M_050219_1,9491,RQFDLAWQY False True RQFDLAWQY 52.130363 613.801196277142 3851259.5 9489.0 ENST00000528087.1_1_11:67120378-67120948:-|nuORF;;ENSG00000175482|ENST00000312419|POLD4;;ENST00000524743.1_1_11:67119998-67120510:-|nuORF;;nc|ENSG00000175482|Q9HCU8-2|POLD4 7.254523595174153 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9492 52.138 442.0 131150.0 25 0 51400.0 14458 IFVKVPWKIFH 11 61 707.4241595088012 1412.8337660844022 2 707.4248535037041 MULTI CID FTMS 0 0 0 9489 140470.171875 0.5028134336071504 -1 0.065948486328125 3 Unmodified _IFVKVPWKIFH_ ENST00000336216.8_1_15:77713046-77713202:+|nuORF 1.4819007175156935 0.86815623132643 5 R 1 11 0.9691 0.0 0.0 0.068593 0.0 0.0 1130.6655054416271 123.04557214908436 1253.7110775907115 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.068593 - 3 + 1 1.947 61425.7 1.0 5050 4440 9489 SUDHL4_400M_050219_1,9492 SUDHL4_400M_050219_1,9492,IFVKVPWKIFH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9493 52.145 356.0 395400.0 25 0 55116.0 + 24169 LYTLSTLLSKL 11 88 626.3797912434449 1250.7450295536896 2 626.3799316287041 MULTI CID FTMS 0 0 0 9489 121506.703125 0.2582489310624976 -2 0.1529388427734375 4 Unmodified _LYTLSTLLSKL_ REV__ENST00000355315.7_2_8:57130481-57130601:+|nuORF 5.731851221503515 0.8481046878870278 5 M 1 -1 3.0989 0.0 0.0 0.24777 0.0 0.0 660.4038563132584 456.2754610651001 1116.6793173783583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.24777 - 22 + 1 1.947 107413.9 1.0 5051 4440 9489 SUDHL4_400M_050219_1,9493 SUDHL4_400M_050219_1,9493,LYTLSTLLSKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9494 52.151 352.0 241220.0 25 0 23337.0 -1 SLVLVTMVMRL 11 80 647.3667026232317 1292.7188523132634 2 647.3668701052666 MULTI CID FTMS 0 0 0 9489 78481.375 1.0 0 0.0 5 2 Oxidation (M) _SLVLVTM(Oxidation (M))VM(Oxidation (M))RL_ ENSG00000127412|ENST00000265310|TRPV5 2.9952420565917617 0.861016188266951 5 M 1 -1 4.6041 0.0 0.0 0.35616 0.0 0.0 682.3543192227561 476.3012796300616 1158.6555988528175 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.35616 + + 11 + 1 1.947 71248.6 1.0 5052 4440 9489 SUDHL4_400M_050219_1,9494 SUDHL4_400M_050219_1,9494,SLVLVTMVMRL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9495 52.165 800.0 308790.0 25 0 79803.0 + 16719 KEVINRIQRL 10 116 634.8932952211968 1267.7720375091935 2 634.8939086794853 MULTI CID FTMS 0 0 0 9489 100977.8984375 0.175594669122342 -2 0.1529388427734375 6 Unmodified _KEVINRIQRL_ REV__ENSG00000101972|ENST00000371145|STAG2;REV__nc|ENSG00000101972|Q8N3U4|STAG2 7.477065608646677 0.69205068831198 5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V 4 -1 17.154 0.0 0.0 1.353 0.0 0.0 0.0 795.4584443297591 795.4584443297591 7.821194675098821 0.0 0.0 0.0 0 0.0 0.0 1.024227503252014 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}V 1.353 - 64 1 1.947 189427.2 0.5699999928474426 5053 4440 9489 SUDHL4_400M_050219_1,9495 SUDHL4_400M_050219_1,9495,KEVINRIQRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9497 52.181 800.0 125340.0 25 0 10877.0 + 12084 GQFPSYLETV 10 105 1140.558035066915 1139.550758600315 1 1140.559619128704 MULTI CID FTMS 0 0 0 9496 63571.70703125 0.6268525428185128 2 -0.2105026245117187 1 Unmodified _GQFPSYLETV_ ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5 70.92866715596459 0.0189067049654103 5 [PS]Y{I|L}E{M(Oxidation (M))|F}ANTV 10 6 + 83.479 0.0 0.0 7.3256 7.3256 85.111 0.0 0.0 0.0 9.57203416424356 54.24742501084005 9.57203416424356 1.5051499783199065 0 0.4247425010840047 0.0 2.102568435936441 0.7059771852360797 [PS]Y{I|L}E{M(Oxidation (M))|F}ANTV;[PS]Y{I|L}{M(Oxidation (M))|F}EANTV;[PS]Y{I|L}QG{M(Oxidation (M))|F}ETV;{[QG]|[NA]}{M(Oxidation (M))|F}{[CP]|[EA]}{M(Oxidation (M))|F}{I|L}ETV;[PS]Y{I|L}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}NTV;[Y{I|L}]ETTEANTV;[PS]Y{I|L}QG{M(Oxidation (M))|F}TEV;[PS]Y{[QG]|[NA]}{M(Oxidation (M))|F}KNTV;{[QG]|[NA]}{M(Oxidation (M))|F}{[CP]|[EA]}{M(Oxidation (M))|F}{I|L}TEV;{[QG]|[NA]}{M(Oxidation (M))|F}KE{M(Oxidation (M))|F}ANTV 7.3256;7.1935;6.4008;6.3434;6.1962;6.1766;6.1628;6.1128;6.1055;6.0216 -;-;-;-;-;-;-;-;-;- 7410 1 1.947 65702.5 0.4399999976158142 5054 4441 9496 SUDHL4_400M_050219_1,9497 SUDHL4_400M_050219_1,9497,GQFPSYLETV True True GQFPSYLETV 52.18125 1140.5596191287 1048058.8125 9496.0 nc|ENSG00000164818|Q86Y56-3|DNAAF5;;nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENSG00000164818|ENST00000297440|DNAAF5 7.453404108683268 1.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9498 52.195 800.0 186000.0 25 0 66673.0 13262 HIKEKRHKKNI 11 112 715.9374521641093 1429.8603513950186 2 715.9376708865166 MULTI CID FTMS 0 0 0 9496 317902.625 1.0 0 0.0 2 Unmodified _HIKEKRHKKNI_ ENSG00000083223|ENST00000375963|TUT7;ENSG00000134744|ENST00000257177|TUT4;ENST00000277141.10_2_9:88941382-88968129:-|nuORF;nc|ENSG00000083223|Q5VYS8-2|TUT7;nc|ENSG00000083223|Q5VYS8-3|TUT7;nc|ENSG00000083223|Q5VYS8-4|TUT7;nc|ENSG00000083223|Q5VYS8-5|TUT7;nc|ENSG00000083223|Q5VYS8-6|TUT7;nc|ENSG00000134744|Q5TAX3-2|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4 1.4819007175156935 0.86815623132643 5 {NN|[MP]|[D{I|L}]|[EV]}VVA{I|L}S 7 10 9.416 0.0 0.0 0.65853 0.0 0.0 0.0 729.4532218386311 729.4532218386311 0.740138632830682 0.0 0.0 0.0 0 0.0 0.585026652029182 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}VVA{I|L}S 0.65853 - 52 1 1.947 124820.5 0.8899999856948853 5055 4441 9496 SUDHL4_400M_050219_1,9498 SUDHL4_400M_050219_1,9498,HIKEKRHKKNI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9499 52.209 800.0 204530.0 25 0 63718.0 31711 RRPRRNARRLP 11 122 724.4510413893836 1446.887529845567 2 724.4510986208916 MULTI CID FTMS 0 0 0 9496 277969.53125 1.0 0 0.0 3 Unmodified _RRPRRNARRLP_ ENSG00000063978|ENST00000314289|RNF4 1.3295316138638542 0.8688751186870782 5 {[QV]|[N{I|L}]|[RA]|[KV]}VPAVM 7 9 20.183 0.0 0.0 1.3949 0.0 0.0 0.0 719.464409078242 719.464409078242 11.599756604087773 0.0 0.0 0.0 0 0.0 0.5376020021010439 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}VPAVM 1.3949 - 342 1 1.947 135442.3 0.8199999928474426 5056 4441 9496 SUDHL4_400M_050219_1,9499 SUDHL4_400M_050219_1,9499,RRPRRNARRLP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9500 52.223 800.0 360620.0 25 0 66485.0 + -1 PKTLRMVKLAL 11 113 643.4062047887867 1284.7978566443733 2 643.4064208865166 MULTI CID FTMS 0 0 0 9496 242393.578125 0.404451045151548 -3 0.207000732421875 4 Oxidation (M) _PKTLRM(Oxidation (M))VKLAL_ REV__ENSG00000113597|ENST00000399438|TRAPPC13;REV__ENST00000508304.5_1_5:64920917-64948411:+|nuORF;REV__ENST00000512009.5_1_5:64920875-64956772:+|nuORF;REV__nc|ENSG00000113597|A5PLN9-2|TRAPPC13;REV__nc|ENSG00000113597|A5PLN9-4|TRAPPC13;REV__nc|ENSG00000113597|A5PLN9-5|TRAPPC13;REV__nc|ENSG00000113597|A5PLN9-7|TRAPPC13 4.897010918128616 0.8520435188433833 5 M 1 -1 4.6041 0.0 0.0 0.35835 0.0 0.0 678.4657271528354 472.27055605231794 1150.7362832051533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.35835 + + 23 + 1 1.947 216397.9 0.7599999904632568 5057 4441 9496 SUDHL4_400M_050219_1,9500 SUDHL4_400M_050219_1,9500,PKTLRMVKLAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9501 52.228 305.0 638430.0 25 0 127950.0 + 30989 RLDELGGVYL 10 75 567.8114058449758 1133.6082587567514 2 567.8116332888603 MULTI CID FTMS 0 0 0 9496 216907.578125 0.1340987709742253 -3 0.207000732421875 5 Unmodified _RLDELGGVYL_ ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2 37.07464296494664 0.1884581770199685 5 [{I|L}V][WD]{I|L}NVY{I|L} 9 4 + 65.155 0.0 0.0 5.7476 5.7476 79.928 0.0 0.0 0.0 1.706962271689747 49.93887181533495 1.706962271689747 0.4575749056067479 0 0.8807196863200843 1.3979400086720375 0.3494850021680094 0.6989700043360187 [{I|L}V][WD]{I|L}NVY{I|L};[{I|L}V][WD]{I|L}GGVY{I|L} 5.7476;5.7072 -;- 126 1 1.947 150795.2 1.0 5058 4441 9496 SUDHL4_400M_050219_1,9501 SUDHL4_400M_050219_1,9501,RLDELGGVYL False True RLDELGGVYL 52.228323 567.81163328886 18905124.0 9496.0 ENSG00000118705|ENST00000237530|RPN2;;nc|ENSG00000118705|P04844-2|RPN2 6.370560487111409 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9502 52.24 688.0 143790.0 25 0 28901.0 19286 LEKRLHKTHRL 11 121 477.6277504075557 1429.8614218228672 3 477.6275817751884 MULTI CID FTMS 0 0 0 9496 203010.546875 1.0 0 0.0 6 Unmodified _LEKRLHKTHRL_ ENSG00000177963|ENST00000526104|RIC8A;ENST00000527039.1_1_11:209766-212514:+|nuORF;nc|ENSG00000177963|Q9NPQ8-2|RIC8A;nc|ENSG00000177963|Q9NPQ8-3|RIC8A;nc|ENSG00000177963|Q9NPQ8-4|RIC8A 4.189502756095605 0.855381588458882 5 [{I|L}T]TV 4 9 16.488 0.0 0.0 1.1531 0.0 0.0 0.0 1012.5914077449952 1012.5914077449952 4.014093602655468 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}T]TV 1.1531 - 187 1 1.947 89116.3 1.0 5059 4441 9496 SUDHL4_400M_050219_1,9502 SUDHL4_400M_050219_1,9502,LEKRLHKTHRL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9503 52.246 225.0 423180.0 25 0 69530.0 + 38946 TVMGKIFAV 9 114 483.2782513506095 0 483.2782775759697 PEAK CID FTMS 0 0 0 9496 195471.140625 0.905740500049522 -1 0.0540618896484375 7 Unmodified _TVMGKIFAV_ ENSG00000145332|ENST00000273963|KLHL8;nc|ENSG00000145332|Q9P2G9-2|KLHL8 21.74664581756881 0.185237546287679 5 CA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T 6 7 23.318 0.0 0.0 2.4176 0.0 0.0 214.19143814868147 68.05136285953358 282.24280100821505 0.0 0.0 0.0 0.0 0 0.0 0.0 1.0297966019298022 0.0 CA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T 2.4176 - 227 + 1 1.947 75303.6 1.0 5060 4441 9496 SUDHL4_400M_050219_1,9503 SUDHL4_400M_050219_1,9503,TVMGKIFAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9504 52.25 211.0 272840.0 25 0 51211.0 3510 CRPIALRRAVP 11 63 417.92214494321627 1250.744605429849 3 417.9220764040947 MULTI CID FTMS 0 0 0 9496 186959.234375 0.5605330103569436 -1 0.0540618896484375 8 Unmodified _CRPIALRRAVP_ ENST00000308086.2_1_12:72058272-72068101:+|nuORF;ENST00000547843.1_1_12:72058272-72058662:+|nuORF 1.3295316138638542 0.8688751186870782 5 P 1 10 0.48455 0.0 0.0 0.038741 0.0 0.0 1030.6131947626598 120.05088220767811 1150.664076970338 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.038741 + + 3 + 1 1.947 52757.5 1.0 5061 4441 9496 SUDHL4_400M_050219_1,9504 SUDHL4_400M_050219_1,9504,CRPIALRRAVP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9505 52.255 294.0 209520.0 25 0 33664.0 + 31418 RPLGGRCIKRL 11 77 423.59781700808105 1267.7716216244432 3 423.5974609255791 MULTI CID FTMS 0 0 0 9496 156090.421875 0.5214108163891212 -1 0.0540618896484375 9 Unmodified _RPLGGRCIKRL_ REV__ENST00000346991.9_1_15:40886503-40897315:+|nuORF;REV__ENST00000528975.5_2_15:40886503-40898637:+|nuORF 0.4545168274142398 0.8730034954726786 5 P 1 -1 1.9897 0.0 0.0 0.15694 0.0 0.0 1047.6402567336213 120.0507830255492 1167.6910397591705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.15694 + + 9 + 1 1.947 57863.4 1.0 5062 4441 9496 SUDHL4_400M_050219_1,9505 SUDHL4_400M_050219_1,9505,RPLGGRCIKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9506 52.269 800.0 486570.0 25 0 31137.0 -1 0 158 914.4349408521616 1826.855328771124 2 914.9362670779228 MULTI CID FTMS 0 0 0 9496 150796.53125 0.1830374029089718 -3 0.207000732421875 10 5 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 107.83 0.0 0.0 5.9026 5.9026 86.325 0.0 0.0 0.0 5.769860741670911 9.750189985727076 5.769860741670911 5.769860741670911 0 1.048455006504028 1.2218487496163564 0.3054621874040891 2.223197507588033 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VC(Carbamidomethyl (C))C(Carbamidomethyl (C))AQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VG[C(Carbamidomethyl (C))C]AQQNA{M(Oxidation (M))|F}YQV{I|L};[KT]EY{M(Oxidation (M))|F}ANQQAED[DG]V{I|L};[KT]EY{M(Oxidation (M))|F}ANQQAEGDDV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VGW[{M(Oxidation (M))|F}E]QNA{M(Oxidation (M))|F}YQV{I|L};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F}YQV{I|L};[KT]EY{M(Oxidation (M))|F}ANQQAWDDV{I|L};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}H[RP]{I|L} 5.9026;5.5868;5.5715;5.3689;5.2725;5.2066;5.0991;5.07;5.031;4.944 -;-;-;-;-;-;-;-;-;- 25035 1 1.947 249591.5 0.5199999809265137 5063 4441 9496 SUDHL4_400M_050219_1,9506 SUDHL4_400M_050219_1,9506, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9507 52.283 800.0 231630.0 25 0 21217.0 + 34105 SLLPEGPPAI 10 169 497.2844272795152 992.5543016258304 2 497.2845641970634 MULTI CID FTMS 0 0 0 9496 135302.5625 0.9923039230740672 -3 0.207000732421875 11 Unmodified _SLLPEGPPAI_ ENSG00000051108|ENST00000439977|HERPUD1;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 61.357469665136826 0.0330252915653943 5 {[TV]|[{I|L}S]}{I|L}[EP]GPPA{I|L} 10 0 + 57.948 0.0 0.0 5.8383 5.8383 92.283 0.0 0.0 0.0 40.15637402744778 2.0944070240897545 2.0944070240897545 21.6243799541646 0 1.5387254899964358 1.6989700043360187 0.4247425010840047 0.0 + + {[TV]|[{I|L}S]}{I|L}[EP]GPPA{I|L};{[TV]|[{I|L}S]}VP{[CP]|[EA]}PPA{I|L};{[TV]|[{I|L}S]}VP[EP]APA{I|L};{[TV]|[{I|L}S]}{I|L}[EP]G[{I|L}A]{[HG]|PP};{[TV]|[{I|L}S]}{I|L}[VS][YQ]A{I|L};{[TV]|[{I|L}S]}VP[EP]G[VP]V;{[TV]|[{I|L}S]}VPV[TP]S{[HG]|PP};{[TV]|[{I|L}S]}{I|L}[VS]{I|L}{[QS]|[NT]}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}VP[TP]VS{[HG]|PP};{[TV]|[{I|L}S]}{I|L}[EP][Q{I|L}]{[HG]|PP} 5.8383;3.6596;3.5568;3.1094;2.9646;2.9135;2.4355;2.4194;2.3096;2.0234 +;-;-;-;-;-;-;-;-;- + 1014 + 1 1.947 141247.3 0.5199999809265137 5064 4441 9496 SUDHL4_400M_050219_1,9507 SUDHL4_400M_050219_1,9507,SLLPEGPPAI True True SLLPEGPPAI 52.283027 497.284564197063 1262981.75 9496.0 nc|ENSG00000051108|Q15011-4|HERPUD1;;nc|ENSG00000051108|Q15011-2|HERPUD1;;nc|ENSG00000051108|Q15011-3|HERPUD1;;ENSG00000051108|ENST00000439977|HERPUD1 4.739958763122559 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9508 52.298 800.0 66108.0 25 0 9201.8 8673 EVIKWTKFFI 10 98 655.8803509501904 1309.7461489671807 2 655.8796874880791 MULTI CID FTMS 0 0 0 9496 93651.71875 1.0 0 0.0 12 Unmodified _EVIKWTKFFI_ ENST00000332359.5_1_X:149282682-149283381:+|nuORF 13.90604991867851 0.6142120002215601 5 {I|L} 1 9 12.218 0.0 0.0 0.93289 0.0 0.0 1178.6510389591713 0.0 1178.6510389591713 0.0 3.266062568876718 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.93289 + + 95 + 1 1.947 49352.4 0.4300000071525574 5065 4441 9496 SUDHL4_400M_050219_1,9508 SUDHL4_400M_050219_1,9508,EVIKWTKFFI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9509 52.312 800.0 204510.0 25 0 95316.0 + 19088 LDRVRRRRIK 10 91 684.4451171755791 0 684.4451171755791 PEAK CID FTMS 0 0 0 -1 0 13 Unmodified _LDRVRRRRIK_ REV__ENSG00000092929|ENST00000207549|UNC13D;REV__ENST00000588774.1_1_17:73839881-73840376:-|nuORF;REV__ENST00000591563.5_1_17:73836050-73840487:-|nuORF;REV__nc|ENSG00000092929|Q70J99-2|UNC13D;REV__nc|ENSG00000092929|Q70J99-3|UNC13D 3.2813086475875832 0.3961065659209837 5 D 1 -1 0.83746 0.0 0.0 0.061268 0.0 0.0 1152.7429088849624 96.08248315982657 1248.825392044789 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.061268 + + 6 + 1 1.947 132579.1 0.449999988079071 5066 4441 9496 SUDHL4_400M_050219_1,9509 SUDHL4_400M_050219_1,9509,LDRVRRRRIK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9511 52.318 103.0 1252600.0 25 0 90939.0 + 10192 FQDPVPLTV 9 114 508.2764581024044 1014.5383632716088 2 508.2767822146416 MULTI CID FTMS 0 0 0 9510 1169770.5 0.884785008952642 -2 0.2010841369628906 1 Unmodified _FQDPVPLTV_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 66.45667989310934 0.0225072657982126 5 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}PVPD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 4 + 61.246 0.0 0.0 6.0368 6.0368 83.756 0.0 0.0 0.0 0.0 0.0 0.0 2.737642882298914 0 0.8807196863200843 0.0 0.0 1.3564921830680703 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}PVPD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[{I|L}P]T{M(Oxidation (M))|F}QP{I|L}{[TV]|[{I|L}S]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PDVP{I|L}{[TV]|[{I|L}S]};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}PVP{I|L}{[TV]|[{I|L}S]};[{I|L}T]P{M(Oxidation (M))|F}QP{I|L}{[TV]|[{I|L}S]};[{I|L}P]T{M(Oxidation (M))|F}[AG]P{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[CS]PVP{I|L}{[TV]|[{I|L}S]};[VP]D{M(Oxidation (M))|F}QP{I|L}{[TV]|[{I|L}S]};[{I|L}P]{M(Oxidation (M))|F}[DN]P{I|L}{[TV]|[{I|L}S]};[VP]{M(Oxidation (M))|F}DQP{I|L}{[TV]|[{I|L}S]} 6.0368;5.767;4.9318;4.8833;4.6058;4.5388;4.3075;4.0817;3.9435;3.6114 -;-;-;-;-;-;-;-;-;- 891 + 1 1.947 105689.0 1.0 5067 4442 9510 SUDHL4_400M_050219_1,9511 SUDHL4_400M_050219_1,9511,FQDPVPLTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9512 52.321 147.0 481750.0 25 0 72439.0 + 25715 NIIELVHQV 9 81 532.8081287182677 1063.6017045033352 2 532.8087036013603 MULTI CID FTMS 0 0 0 9510 202778.09375 0.324186573301079 1 -0.0634803771972656 2 Unmodified _NIIELVHQV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 39.94969957227396 0.0757326808254658 5 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VH{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 59.701 0.0 0.0 5.6131 5.6131 81.116 0.0 0.0 0.0 45.008491328472005 5.422152515121219 5.422152515121219 1.6334835803019132 0 0.8494850021680094 2.0 0.3054621874040891 0.25 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VH{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EV{I|L}H{[QV]|[N{I|L}]|[RA]|[KV]} 5.6131;5.4595 +;- + 142 + 1 1.947 59416.5 1.0 5068 4442 9510 SUDHL4_400M_050219_1,9512 SUDHL4_400M_050219_1,9512,NIIELVHQV True True NIIELVHQV 52.320891 532.80870360136 8508201.0 9510.0 chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;;nc|ENSG00000165025|P43405-2|SYK;;ENSG00000165025|ENST00000375754|SYK 7.8957953453063965 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9513 52.325 208.0 455840.0 25 0 47919.0 + 9428 FLADPSAFVAA 11 119 554.7872045198795 1107.559856106559 2 554.7872802615166 MULTI CID FTMS 0 0 0 9510 452429.0 0.3150573154819261 -2 0.2010841369628906 3 Unmodified _FLADPSAFVAA_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000496593.5_1_11:61404148-61405105:+|nuORF;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 68.08070601005525 0.0379666706128858 5 [TP]G{M(Oxidation (M))|F}VEA{M(Oxidation (M))|F}VAA 11 6 + 71.718 0.0 0.0 6.4753 6.4753 83.395 0.0 0.0 0.0 10.942124970647022 6.333498159257786 6.333498159257786 1.5887093670372678 0 0.25 1.6989700043360187 2.1549471895720984 0.0 [TP]G{M(Oxidation (M))|F}VEA{M(Oxidation (M))|F}VAA;[TP]G{M(Oxidation (M))|F}V{M(Oxidation (M))|F}EAVAA;[TP]G{M(Oxidation (M))|F}VE{M(Oxidation (M))|F}AVAA;[TP]G{M(Oxidation (M))|F}VAE{M(Oxidation (M))|F}VAA;[TP]G{M(Oxidation (M))|F}DA{I|L}{M(Oxidation (M))|F}VAA;[TP]G{M(Oxidation (M))|F}D{I|L}A{M(Oxidation (M))|F}VAA;[TP]G{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}DAVAA;{[VA]|[{I|L}G]}[MT]VEA{M(Oxidation (M))|F}VAA;[PS]A{M(Oxidation (M))|F}VEA{M(Oxidation (M))|F}VAA;[TP]G{M(Oxidation (M))|F}D{I|L}{M(Oxidation (M))|F}AVAA 6.4753;6.3318;6.1816;6.06;5.7664;5.7508;5.52;5.4873;5.4798;5.4572 -;-;-;-;-;-;-;-;-;- 9053 1 1.947 81749.9 1.0 5069 4442 9510 SUDHL4_400M_050219_1,9513 SUDHL4_400M_050219_1,9513,FLADPSAFVAA True True FLADPSAFVAA 52.324862 554.787280261517 18302394.0 9510.0 ENST00000496593.5_1_11:61404148-61405105:+|nuORF;;ENSG00000089157|ENST00000392514|RPLP0;;nc|ENSG00000213553|Q8NHW5|RPLP0P6;;nc|ENSG00000089157|P05388-2|RPLP0 2.8952764173348746 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9514 52.328 182.0 626580.0 25 0 46383.0 + 29593 QLVDIIEKV 9 114 528.8184763199391 1055.6223997066782 2 528.8189575076103 MULTI CID FTMS 0 0 0 9510 333775.28125 0.325887699061722 -2 0.2010841369628906 4 Unmodified _QLVDIIEKV_ ENSG00000131467|ENST00000590720|PSME3;ENST00000593111.1_1_17:40986588-40991030:+|nuORF;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3 87.25819977447905 0.0157581688916699 5 [Q{I|L}]VD{I|L}{I|L}EKV 9 0 + 84.284 0.0 0.0 7.9843 7.9843 97.844 0.0 0.0 0.0 32.47933455448525 16.91122510072759 16.91122510072759 39.61372217122785 0 1.5858317385287872 1.5228787452803376 0.805462187404089 0.1989700043360188 + + [Q{I|L}]VD{I|L}{I|L}EKV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}N{I|L}T[R{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}VQ{I|L}T[R{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}GG{I|L}T[R{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}VQT[R{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}D{I|L}K[Q{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}V[AG]{I|L}T[R{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}K{[HG]|PP}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[TV]|[{I|L}S]}G[RH]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}EVK[Q{I|L}]V 7.9843;4.2317;3.7375;3.3594;3.0917;2.9238;2.8652;2.7644;2.6897;2.6882 +;-;-;-;-;-;-;-;-;- + 851 + 1 1.947 93367.9 1.0 5070 4442 9510 SUDHL4_400M_050219_1,9514 SUDHL4_400M_050219_1,9514,QLVDIIEKV True True QLVDIIEKV 52.328386 528.81895750761 9002163.0 9510.0 ENST00000593111.1_1_17:40986588-40991030:+|nuORF;;ENSG00000131467|ENST00000590720|PSME3;;nc|ENSG00000131467|P61289-2|PSME3;;nc|ENSG00000131467|P61289-3|PSME3 5.642038504282634 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9515 52.337 470.0 258680.0 25 0 34426.0 + 37895 TLWPEVQKL 9 122 557.3187460072519 1112.6229390813037 2 557.3185912966728 MULTI CID FTMS 0 0 0 9510 166963.953125 0.2141849984574068 -8 0.6095733642578125 5 Unmodified _TLWPEVQKL_ ENSG00000134759|ENST00000358232|ELP2;ENST00000541294.1_1_18:33739943-33744659:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 71.92227651296345 0.0203558744033348 5 [{I|L}T]WPEVQK{I|L} 9 0 + 84.624 0.0 0.0 7.6058 7.6058 93.647 0.0 0.0 0.0 42.73509716672216 11.706962271689749 11.706962271689749 9.208187539523747 0 0.7742275032520141 1.6989700043360187 0.6549471895720985 1.4291746928241125 + + [{I|L}T]WPEVQK{I|L};[{I|L}T]WPEV[AG]K{I|L};[{I|L}T]WRRW[VP];{[QN]|[E{I|L}]|[KN]}KWRW[VP];[{I|L}T]Q[{I|L}T][VG]W[VP];[{I|L}T]Q[{I|L}T]R{[DA]|[EG]}[VP];{[QN]|[E{I|L}]|[KN]}K[VS][VG]W[VP];{[QN]|[E{I|L}]|[KN]}K[VS]R[VS][VP];{[QN]|[E{I|L}]|[KN]}K[VS]R{[DA]|[EG]}[VP];[W{I|L}]TRRW[VP] 7.6058;6.7782;4.4609;4.0344;3.5643;3.5643;2.9108;2.9108;2.9108;2.8009 +;-;-;-;-;-;-;-;-;- + 1167 + 1 1.947 95865.5 1.0 5071 4442 9510 SUDHL4_400M_050219_1,9515 SUDHL4_400M_050219_1,9515,TLWPEVQKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9516 52.351 800.0 136290.0 25 0 9076.2 + 23117 LSPETPLEV 9 129 492.7658280754066 983.5171032176132 2 492.7660095095634 MULTI CID FTMS 0 0 0 9510 116366.7265625 0.5608213650178767 3 -0.1894569396972656 6 Unmodified _LSPETPLEV_ REV__ENSG00000129465|ENST00000216274|RIPK3 36.04419817259434 0.0971720506436186 5 {NN|[MP]|[D{I|L}]|[EV]}EPVA 6 -1 39.754 0.0 0.0 4.0421 0.0 0.0 0.0 356.18040823153825 356.18040823153825 20.57319389984244 0.0 0.0 0.0 0 0.0 1.0 0.6109243748081782 0.0 {NN|[MP]|[D{I|L}]|[EV]}EPVA 4.0421 - 362 1 1.947 85892.7 0.4799999892711639 5072 4442 9510 SUDHL4_400M_050219_1,9516 SUDHL4_400M_050219_1,9516,LSPETPLEV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9517 52.364 800.0 230980.0 25 0 10473.0 + 17248 KLMDLDVEQL 10 160 602.3176238051533 1202.6206946771065 2 602.3177978396416 MULTI CID FTMS 0 0 0 9510 104860.0546875 0.479980041370564 -2 0.2010841369628906 7 Unmodified _KLMDLDVEQL_ ENSG00000132646|ENST00000379143|PCNA;ENST00000397222.2_1_X:45918520-45918886:-|nuORF;ENST00000532690.1_1_11:19296372-19296621:-|nuORF 78.06048673739656 0.0186573233964999 5 [K{I|L}]MD{I|L}DVEQ{I|L} 10 0 + 85.742 0.0 0.0 7.1296 7.1296 82.885 0.0 0.0 0.0 0.0525388663108827 16.53212513775344 0.0525388663108827 0.0525388663108827 0 1.2931576817365436 0.6020599913279624 1.7416440611282624 0.4247425010840047 + + [K{I|L}]MD{I|L}DVEQ{I|L};{[QN]|[E{I|L}]|[KN]}ECK{I|L}VEQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}MK{I|L}DVEQ{I|L};{[QN]|[E{I|L}]|[KN]}EC{I|L}KVEQ{I|L};[K{I|L}]MDD{I|L}VEQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}MKD{I|L}VEQ{I|L};[DV]EMK{I|L}VEQ{I|L};[K{I|L}]MD{I|L}DVE[AG]{I|L};{[QN]|[E{I|L}]|[KN]}ECK{I|L}VE[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}MK{I|L}DVE[AG]{I|L} 7.1296;7.1252;7.1187;6.6088;6.5824;6.5716;6.5472;6.3675;6.3632;6.3567 +;-;-;-;-;-;-;-;-;- + 10611 1 1.947 133225.6 0.4900000095367431 5073 4442 9510 SUDHL4_400M_050219_1,9517 SUDHL4_400M_050219_1,9517,KLMDLDVEQL True True KLMDLDVEQL 52.364357 602.317797839642 1059819.75 9510.0 ENSG00000132646|ENST00000379143|PCNA;;ENST00000397222.2_1_X:45918520-45918886:-|nuORF;;chr20:5117658-5118610|11|64.09|0.53|6.92|-|0|None,PCNA|1;;ENST00000532690.1_1_11:19296372-19296621:-|nuORF 5.566903273264567 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9518 52.375 630.0 288960.0 25 0 26960.0 + 35870 SVLLEPRLC 9 160 515.2909458369987 1028.5673387407974 2 515.2915527224541 MULTI CID FTMS 0 0 0 9510 102130.8671875 0.3623363620902636 -4 0.3540229797363281 8 Unmodified _SVLLEPRLC_ ENST00000439473.5_1_7:102815698-102825964:-|nuORF 40.23920728925047 0.0741434193262949 5 [VS]{I|L}[WM][PA]{I|L}{I|L} 9 4 + 59.779 0.0 0.0 5.8119 5.8119 83.835 0.0 0.0 0.0 8.757790499714986 16.478174818886373 8.757790499714986 3.36696871556164 0 1.555462187404089 1.3010299956639813 1.2059771852360797 0.0 [VS]{I|L}[WM][PA]{I|L}{I|L};[VS]{I|L}[WM]{I|L}PA{I|L};[PA][YR]E{I|L}PA{I|L};{[TV]|[{I|L}S]}V[WM][PA]{I|L}{I|L};[VS]{I|L}{I|L}{[QG]|[NA]}{[WN]|[YH]}{I|L};[VS]{I|L}{I|L}[WM]PA{I|L};[VS]{I|L}{[WN]|[YH]}{[QG]|[NA]}{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}{[WN]|[YH]}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}T{I|L}PA{I|L};{[TV]|[{I|L}S]}V[WM]{I|L}PA{I|L} 5.8119;5.4845;4.9604;4.7489;4.6727;4.6586;4.5941;4.5941;4.4315;4.4216 -;-;-;-;-;-;-;-;-;- 1384 1 1.947 146943.2 1.0 5074 4442 9510 SUDHL4_400M_050219_1,9518 SUDHL4_400M_050219_1,9518,SVLLEPRLC True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9520 52.38 56.0 764160.0 25 0 61220.0 38248 TPVLTSPGAV 10 58 471.2691363825657 940.5237198319312 2 471.2689086794853 MULTI CID FTMS 0 0 0 9519 539355.125 0.3921019309936965 1 -0.0186042785644531 1 Unmodified _TPVLTSPGAV_ ENSG00000204843|ENST00000628224|DCTN1;ENST00000466110.5_1_2:74598513-74598831:-|nuORF;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 28.486842064014134 0.328649637529545 5 {[VA]|[{I|L}G]}G 3 8 27.447 0.0 0.0 2.9183 0.0 0.0 0.0 710.3732583663641 710.3732583663641 0.6137816695353777 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}G 2.9183 - 100 1 1.947 42761.7 1.0 5075 4443 9519 SUDHL4_400M_050219_1,9520 SUDHL4_400M_050219_1,9520,TPVLTSPGAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9521 52.394 800.0 171080.0 25 0 12195.0 -1 VAPVCAFCL 9 165 490.2427924157711 978.4710318983422 2 490.2423278689384 MULTI CID FTMS 0 0 0 9519 9309.7626953125 0.0911918525967589 2 -0.1259765625 2 Carbamidomethyl (C) _VAPVCAFC(Carbamidomethyl (C))L_ ENST00000405486.5_2_22:41681791-41681956:-|nuORF 20.871210003555333 0.2717241269066626 5 VADA{I|L}S 6 -1 61.017 0.0 0.0 6.236 0.0 0.0 0.0 419.1600741022094 419.1600741022094 37.07236142956448 0.0 0.0 0.0 0 0.5891368308784531 1.6989700043360187 0.3494850021680094 0.0 VADA{I|L}S 6.236 - 662 + 1 1.947 110479.8 0.9200000166893004 5076 4443 9519 SUDHL4_400M_050219_1,9521 SUDHL4_400M_050219_1,9521,VAPVCAFCL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9523 52.399 119.0 475930.0 25 0 87116.0 31622 RRASRHIVRT 10 57 626.3797912434449 1250.7450295536896 2 626.3798095583916 MULTI CID FTMS 0 0 0 9522 439668.5625 0.9344664398523068 2 -0.1560630798339843 1 Unmodified _RRASRHIVRT_ ENST00000263663.9_1_2:9994458-10008411:+|nuORF 1.4819007175156935 0.719781833666733 5 M 1 10 3.9794 0.0 0.0 0.31816 0.0 0.0 660.4017200827897 456.2761324518188 1116.6778525346083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.31816 - 2 + 1 1.947 48371.6 1.0 5077 4444 9522 SUDHL4_400M_050219_1,9523 SUDHL4_400M_050219_1,9523,RRASRHIVRT False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9524 52.404 268.0 248630.0 25 0 34404.0 + 9693 FLSAVDVHL 9 82 500.7766890422859 999.5388251513718 2 500.7767516970634 MULTI CID FTMS 0 0 0 9522 149823.546875 0.9672504744857068 1 -0.1073722839355468 2 Unmodified _FLSAVDVHL_ ENST00000240618.10_1_12:10541419-10542549:-|nuORF;ENST00000585711.5_1_12:10541419-10558453:-|nuORF;ENST00000586581.5_1_12:10541419-10560248:-|nuORF 36.04419817259434 0.0971720506436186 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SAVDVH{I|L} 9 0 + 38.867 0.0 0.0 3.8885 3.8885 85.278 0.0 0.0 0.0 21.419497169889333 6.611592866953167 6.611592866953167 11.576078533616684 0 0.3807196863200844 0.0 0.4247425010840047 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SAVDVH{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SAVD[H{I|L}]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[SG]DVH{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{[RE]|[WV]}VH{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DVH{I|L};WWVH{I|L}{M(Oxidation (M))|F}{I|L};[HV][{M(Oxidation (M))|F}V]VAS{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}[DG]VH{I|L}{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[SG]D[H{I|L}]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WWVH{I|L} 3.8885;2.7303;2.717;2.2679;2.2679;1.7205;1.6724;1.5901;1.5588;1.5029 +;-;-;-;-;-;-;-;-;- + 184 + 1 1.947 56299.9 1.0 5078 4444 9522 SUDHL4_400M_050219_1,9524 SUDHL4_400M_050219_1,9524,FLSAVDVHL True True FLSAVDVHL 52.403926 500.776751697063 877870.8125 9522.0 ENST00000586581.5_1_12:10541419-10560248:-|nuORF;;ENST00000585711.5_1_12:10541419-10558453:-|nuORF;;ENST00000240618.10_1_12:10541419-10542549:-|nuORF 6.374605814615886 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9525 52.411 387.0 265090.0 25 0 30407.0 -1 IFMLKNLF 8 123 521.2949681067047 0 521.2926513552666 PEAK CID FTMS 0 0 0 9522 158821.640625 0.8439384149716221 -2 0.0820846557617187 3 Oxidation (M) _IFM(Oxidation (M))LKNLF_ ENSG00000183307|ENST00000331437|TMEM121B;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B 28.17323086031832 0.2634958848191769 5 TVT[KG]E 6 -1 19.768 0.0 0.0 1.8997 0.0 0.0 165.0867679663292 257.13022467099773 422.2169926373269 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6747425010840047 0.0 TVT[KG]E 1.8997 - 147 + 1 1.947 81316.7 1.0 5079 4444 9522 SUDHL4_400M_050219_1,9525 SUDHL4_400M_050219_1,9525,IFMLKNLF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9526 52.425 800.0 101320.0 25 0 32560.0 + 31340 RMRLRKNRRQ 10 82 707.4241595088012 1412.8337660844022 2 707.4260131716728 MULTI CID FTMS 0 0 0 9522 131021.359375 0.4689913787664763 3 -0.2849655151367187 4 Unmodified _RMRLRKNRRQ_ REV__ENST00000544803.5_1_2:176794774-176794831:-|nuORF 0.4007161486938917 0.7247829448918255 5 {I|L} 1 -1 10.0 0.0 0.0 0.7078 0.0 0.0 1281.7386408176037 0.0 1281.7386408176037 0.0 9.911356165197844 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.7078 + + 8 + 1 1.947 71331.4 0.5799999833106995 5080 4444 9522 SUDHL4_400M_050219_1,9526 SUDHL4_400M_050219_1,9526,RMRLRKNRRQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9527 52.433 484.0 263920.0 25 0 34654.0 + 9522 FLFGEEPSKL 10 112 583.8083155111473 1165.6020780890944 2 583.8088867068291 MULTI CID FTMS 0 0 0 9522 112529.5 1.0 0 0.0 5 Unmodified _FLFGEEPSKL_ ENSG00000176915|ENST00000357997|ANKLE2;nc|ENSG00000176915|Q86XL3-3|ANKLE2 49.52724829834842 0.0829255630816734 5 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GEEPSK{I|L} 10 0 + 63.894 0.0 0.0 5.4817 5.4817 83.272 0.0 0.0 0.0 8.500485872222292 8.500485872222292 8.500485872222292 3.521825181113627 0 0.4247425010840047 0.0 1.174742501084005 0.0 + + {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GEEPSK{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}WEPSK{I|L};[KS]PE{I|L}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}E;[KS]P{I|L}E{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}E;[PS]K{I|L}E{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}E;[PS]KE{I|L}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}E;{[VA]|[{I|L}G]}AA{I|L}E{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}E;{[VA]|[{I|L}G]}AAE{I|L}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}E;[Q{I|L}]AE{I|L}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}E;[Q{I|L}]A{I|L}E{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}E 5.4817;5.1795;4.7524;4.7524;4.5773;4.5773;4.2355;4.2355;4.2233;4.2233 +;-;-;-;-;-;-;-;-;- + 1009 + 1 1.947 100302.3 1.0 5081 4444 9522 SUDHL4_400M_050219_1,9527 SUDHL4_400M_050219_1,9527,FLFGEEPSKL True True FLFGEEPSKL 52.433269 583.808886706829 1230001.125 9522.0 ENSG00000176915|ENST00000357997|ANKLE2;;nc|ENSG00000176915|Q86XL3-3|ANKLE2 5.9923942883809405 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9528 52.442 484.0 126470.0 25 0 26208.0 + 11895 GLVTAWLLV 9 80 486.2986959561845 970.582838979169 2 486.2973205447197 MULTI CID FTMS 0 0 0 9522 106694.1171875 1.0 0 0.0 6 Unmodified _GLVTAWLLV_ REV__ENSG00000018280|ENST00000233202|SLC11A1;REV__ENST00000460592.1_1_2:219249878-219250215:+|nuORF;REV__ENST00000465984.5_1_2:219247091-219251606:+|nuORF;REV__ENST00000469449.1_1_2:219248824-219251606:+|nuORF;REV__ENST00000475225.5_1_2:219247091-219251606:+|nuORF;REV__ENST00000492413.5_1_2:219247091-219251606:+|nuORF;REV__ENST00000494322.5_1_2:219247091-219256951:+|nuORF 30.22481116460888 0.1466181017706357 5 [{I|L}T]Q[TP]S{I|L}{I|L}V 9 -1 + 51.589 0.0 0.0 5.3153 5.3153 80.359 0.0 0.0 0.0 15.799530816977809 27.63682493045401 15.799530816977809 1.706962271689747 0 0.4247425010840047 2.0 0.5 0.0 [{I|L}T]Q[TP]S{I|L}{I|L}V;[{I|L}T]Q{[RE]|[WV]}{I|L}{I|L}V;[{I|L}T][AG][TP]S{I|L}{I|L}V;[{I|L}T][AG]{[RE]|[WV]}{I|L}{I|L}V;[{I|L}A]{[SA]|[TG]}[TP]S{I|L}{I|L}V;[{I|L}A]{[SA]|[TG]}{[RE]|[WV]}{I|L}{I|L}V;{[VA]|[{I|L}G]}[TA][TP]S{I|L}{I|L}V;{[VA]|[{I|L}G]}[TA]{[RE]|[WV]}{I|L}{I|L}V;[VS][VG][TP]S{I|L}{I|L}V;[VS][VG]{[RE]|[WV]}{I|L}{I|L}V 5.3153;5.1394;4.3666;4.1851;3.0261;2.8447;2.8066;2.6251;1.6856;1.5042 -;-;-;-;-;-;-;-;-;- 293 1 1.947 53741.0 1.0 5082 4444 9522 SUDHL4_400M_050219_1,9528 SUDHL4_400M_050219_1,9528,GLVTAWLLV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9529 52.456 800.0 99501.0 25 0 8973.6 -1 0 115 929.4413282914963 1856.8681036497928 2 929.4440185427666 MULTI CID FTMS 0 0 0 9522 93161.2890625 0.8524931358855176 2 -0.1560630798339843 7 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[VP]{[C(Carbamidomethyl (C))E]|[WC]}QNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 68.117 0.0 0.0 3.6684 3.6684 73.68 0.0 0.0 0.0 5.305294006265406 9.4399414112384 5.305294006265406 0.2533120765689034 0 0.5074908058443608 1.6989700043360187 0.4247425010840047 0.5994850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}Y[VP]{[C(Carbamidomethyl (C))E]|[WC]}QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}CC[NS]QQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}[HT]AQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[VP]PC(Carbamidomethyl (C))C(Carbamidomethyl (C))NA{M(Oxidation (M))|F}YQV{I|L};{I|L}{I|L}M{[ET]|[MV]}C(Carbamidomethyl (C))QQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[RH]C(Carbamidomethyl (C))C(Carbamidomethyl (C))NA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[VP]{[C(Carbamidomethyl (C))E]|[WC]}QNA{M(Oxidation (M))|F}YQV{I|L};[Y{M(Oxidation (M))|F}]Q[HT]AQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YY[HD][TP]NA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}[HT]AQ[AG]NA{M(Oxidation (M))|F}YQV{I|L} 3.6684;3.6547;3.3826;3.3173;3.1176;3.0258;3.0048;2.9966;2.9662;2.8963 -;-;-;-;-;-;-;-;-;- 2009 1 1.947 56386.7 0.5600000023841858 5083 4444 9522 SUDHL4_400M_050219_1,9529 SUDHL4_400M_050219_1,9529, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9530 52.47 800.0 336080.0 25 0 9099.5 + -1 AMYGSGIYL 9 185 973.9720407061458 1945.929528479092 2 974.4654418826104 MULTI CID FTMS 0 0 0 9522 191189.5 0.2843868863224819 -2 0.0820846557617187 8 nc|ENSG00000151883|Q8N3A8-2|PARP8;ENSG00000151883|ENST00000281631|PARP8;ENST00000503561.7_1_5:50057675-50130728:+|nuORF 5 [MN]PN{I|L}NEAQRVAMMQ{[TV]|[{I|L}S]} 17 -1 + 88.897 0.0 0.0 4.5684 4.5684 83.043 0.0 0.0 0.0 16.287169898271827 6.611983150897117 6.611983150897117 6.611983150897117 0 1.528659694992122 1.5228787452803376 1.7408427761594596 0.7059771852360797 [MN]PN{I|L}NEAQRVAMMQ{[TV]|[{I|L}S]};[MN]PN{I|L}NEAQRVAMMK{[CP]|[EA]};[MN]PN{I|L}NEA[AG]RVAMMQ{[TV]|[{I|L}S]};[MN]PGG{I|L}NEAQRVAMMQ{[TV]|[{I|L}S]};[MN]PN{I|L}GGEAQRVAMMQ{[TV]|[{I|L}S]};[MN]PN{I|L}NEAQ[VG]VAMMQ{[TV]|[{I|L}S]};[MN]PN{I|L}NEAQRV[W{M(Oxidation (M))|F}]Q{[TV]|[{I|L}S]};[MN]PN{I|L}NEA{M(Oxidation (M))|F}HV[W{M(Oxidation (M))|F}]Q{[TV]|[{I|L}S]};[MN]PN{I|L}NEAQRVAMM[AG]{[TV]|[{I|L}S]};[MN]PN{I|L}NEAQRV{I|L}G[C(Carbamidomethyl (C))M]{[TV]|[{I|L}S]} 4.5684;4.2286;4.1059;4.1059;4.1059;4.1059;4.0956;3.9409;3.9388;3.867 -;-;-;-;-;-;-;-;-;- 152897 + 1 1.947 172094.1 0.7300000190734863 5084 4444 9522 SUDHL4_400M_050219_1,9530 SUDHL4_400M_050219_1,9530, False False AMYGSGIYL 52.469525 974.46544188261 959321.875 9522.0 nc|ENSG00000151883|Q8N3A8-2|PARP8;;ENSG00000151883|ENST00000281631|PARP8;;ENST00000503561.7_1_5:50057675-50130728:+|nuORF 5.288668791453044 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9531 52.474 123.0 518470.0 25 0 71740.0 + 14952 ILMKEQLML 9 89 559.8198608409916 1117.6251687487832 2 559.8196288943291 MULTI CID FTMS 0 0 0 9522 181423.515625 0.4515171905906395 -2 0.0820846557617187 9 Unmodified _ILMKEQLML_ ENST00000478691.5_1_1:23664326-23665089:-|nuORF;ENST00000490652.1_1_1:23664981-23665089:-|nuORF 56.17704186161178 0.0281986971544335 5 {[QN]|[E{I|L}]|[KN]}QKM{I|L}{I|L}M{I|L} 9 4 + 76.265 0.0 0.0 6.8239 6.8239 92.159 0.0 0.0 0.0 21.94978870866732 41.82821711646764 21.94978870866732 9.208187539523747 0 0.805462187404089 1.3979400086720375 0.7302046884880937 0.75 {[QN]|[E{I|L}]|[KN]}QKM{I|L}{I|L}M{I|L};{[QN]|[E{I|L}]|[KN]}[AG]KM{I|L}{I|L}M{I|L};{[QN]|[E{I|L}]|[KN]}HH{I|L}{I|L}{I|L}M{I|L};{[QN]|[E{I|L}]|[KN]}QKM{I|L}M{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}QKMM{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[AG]KM{I|L}M{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[AG]KMM{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}HH{I|L}{I|L}M{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}HH{I|L}M{I|L}{I|L}{I|L};{I|L}{I|L}M{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L} 6.8239;6;5.4624;5.2541;4.8272;4.4302;4.0033;3.8926;3.4657;3.2573 -;-;-;-;-;-;-;-;-;- 199 1 1.947 53279.3 1.0 5085 4444 9522 SUDHL4_400M_050219_1,9531 SUDHL4_400M_050219_1,9531,ILMKEQLML True True ILMKEQLML 52.47354 559.819628894329 2541140.75 9522.0 ENST00000478691.5_1_1:23664326-23665089:-|nuORF;;ENST00000490652.1_1_1:23664981-23665089:-|nuORF 2.4876442352930703 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9532 52.478 209.0 149680.0 25 0 11394.0 28582 PTVGPSLSVVQ 11 70 542.308477974312 0 542.3082763552666 PEAK CID FTMS 0 0 0 9522 152731.203125 1.0 0 0.0 10 Unmodified _PTVGPSLSVVQ_ ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18 17.11289562659939 0.3845757490720307 5 {I|L} 1 10 6.9897 0.0 0.0 0.64564 0.0 0.0 353.1605875204952 613.3366793268186 966.4972668473138 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.64564 + + 33 + 1 1.947 32795.1 1.0 5086 4444 9522 SUDHL4_400M_050219_1,9532 SUDHL4_400M_050219_1,9532,PTVGPSLSVVQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9533 52.482 251.0 236360.0 25 0 18434.0 + 34205 SLPDLTTPL 9 72 956.5300677587038 955.5227912921038 1 956.5317260622978 MULTI CID FTMS 0 0 0 9522 120483.1953125 0.6188793270610625 -2 0.0820846557617187 11 Unmodified _SLPDLTTPL_ ENSG00000005483|ENST00000311117|KMT2E;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000005483|Q8IZD2-5|KMT2E;nc|ENSG00000005483|Q8IZD2-6|KMT2E;nc|ENSG00000005483|Q8IZD2-7|KMT2E;nc|ENSG00000005483|Q8IZD2-8|KMT2E 46.020951573049366 0.0490941689151868 5 [DP]{I|L}TTS{I|L}P{I|L} 9 4 + 68.07 0.0 0.0 7.1238 7.1238 89.85 0.0 0.0 0.0 5.642492736872597 41.62971259689115 5.642492736872597 6.505149978319906 0 0.5 0.0 1.924742501084005 0.0 [DP]{I|L}TTS{I|L}P{I|L};[DP]{I|L}TTVTP{I|L};[DP]{I|L}TVTTP{I|L};[DP]{I|L}AA{M(Oxidation (M))|F}{I|L}P{I|L};[DP]{I|L}RV{M(Oxidation (M))|F}P{I|L};[QT]KPATTP{I|L};[DP][RV]{M(Oxidation (M))|F}{I|L}P{I|L};[DP]{I|L}[HK]HP{I|L};[DP][VG]V{M(Oxidation (M))|F}{I|L}P{I|L};[DP]{I|L}TV[W{I|L}]{I|L} 7.1238;6.443;6.0032;4.3599;4.0704;3.8224;3.682;3.6225;3.4755;3.1827 -;-;-;-;-;-;-;-;-;- 683 1 1.947 46745.5 1.0 5087 4444 9522 SUDHL4_400M_050219_1,9533 SUDHL4_400M_050219_1,9533,SLPDLTTPL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9534 52.487 283.0 270490.0 25 0 11030.0 -1 0 99 966.9641569106157 1931.9137608880312 2 967.4662353396416 MULTI CID FTMS 0 0 0 9522 101876.375 0.0644894580940892 -3 0.2291069030761718 12 5 [MN]PN{I|L}NADQR[PG]DAN{I|L} 16 -1 72.8 0.0 0.0 3.7683 0.0 0.0 0.0 208.07326685123283 208.07326685123283 36.21350502216181 0.0 0.0 0.0 0 0.9731975075880328 1.5228787452803376 0.0 1.110924374808178 [MN]PN{I|L}NADQR[PG]DAN{I|L} 3.7683 - 7808 + 1 1.947 54928.0 1.0 5088 4444 9522 SUDHL4_400M_050219_1,9534 SUDHL4_400M_050219_1,9534, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9535 52.501 800.0 107530.0 25 0 5147.9 + 37931 TLYSVGVTL 9 125 952.5333002866006 951.5260238200004 1 952.5287963747978 MULTI CID FTMS 0 0 0 9522 93194.671875 0.6239323016507723 2 -0.1560630798339843 13 Unmodified _TLYSVGVTL_ ENST00000589878.5_1_19:34663659-34686187:+|nuORF 96.28474662873226 0.0124266067997264 5 [{I|L}T]YSRVT{I|L} 8 2 + 75.044 0.0 0.0 7.8868 7.8868 92.353 0.0 0.0 0.0 9.093793813122076 12.10127000690946 9.093793813122076 8.576810915379056 0 1.5838395061109685 1.3979400086720375 2.1861818737241734 0.0 [{I|L}T]YSRVT{I|L};[{I|L}T]{M(Oxidation (M))|F}S[TA]VT{I|L};[Y{I|L}]TSRVT{I|L};[{I|L}T]YS[VG]VT{I|L};[{I|L}T]YA[TA]VT{I|L};[{I|L}T]YG[VS]VT{I|L};[Y{I|L}]TS[VG]VT{I|L};[{I|L}T]{M(Oxidation (M))|F}SG[{I|L}T]T{I|L};[{I|L}T]YSKVE{I|L};[{I|L}T][PA][HT]VT{I|L} 7.8868;6.9854;6.931;6.9134;6.5027;6.0012;5.9576;5.7734;5.7076;5.6522 -;-;-;+;-;-;-;-;-;- + 3059 1 1.947 62109.6 0.5699999928474426 5089 4444 9522 SUDHL4_400M_050219_1,9535 SUDHL4_400M_050219_1,9535,TLYSVGVTL True True TLYSVGVTL 52.501325 952.528796374798 922058.0625 9522.0 ENST00000589878.5_1_19:34663659-34686187:+|nuORF 6.283589045206706 1.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9537 52.507 92.0 768190.0 25 0 147880.0 + 30990 RLDELGGVYL 10 63 567.8114058449758 1133.6082587567514 2 567.8116332888603 MULTI CID FTMS 0 0 0 9536 412445.53125 0.2549861987881455 1 -0.0486907958984375 1 Unmodified _RLDELGGVYL_ ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2 16.565877749689598 0.5695826726197942 5 E{I|L}NVY{I|L} 6 5 52.964 0.0 0.0 4.6722 0.0 0.0 384.2118397443375 0.0 384.2118397443375 0.0 41.99478448944497 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 E{I|L}NVY{I|L} 4.6722 - 40 1 1.966 56829.1 1.0 5090 4445 9536 SUDHL4_400M_050219_1,9537 SUDHL4_400M_050219_1,9537,RLDELGGVYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9538 52.517 529.0 180650.0 25 0 24142.0 + -1 PKTLRMVKLAL 11 75 643.4062047887867 1284.7978566443733 2 643.4064819216728 MULTI CID FTMS 0 0 0 9536 41192.71875 0.0687330014266287 1 -0.0486907958984375 2 Oxidation (M) _PKTLRM(Oxidation (M))VKLAL_ REV__ENSG00000113597|ENST00000399438|TRAPPC13;REV__ENST00000508304.5_1_5:64920917-64948411:+|nuORF;REV__ENST00000512009.5_1_5:64920875-64956772:+|nuORF;REV__nc|ENSG00000113597|A5PLN9-2|TRAPPC13;REV__nc|ENSG00000113597|A5PLN9-4|TRAPPC13;REV__nc|ENSG00000113597|A5PLN9-5|TRAPPC13;REV__nc|ENSG00000113597|A5PLN9-7|TRAPPC13 2.498486711656943 0.8633599123570009 5 {I|L} 1 -1 10.379 0.0 0.0 0.8078 0.0 0.0 1153.7028229303091 0.0 1153.7028229303091 0.0 6.883753548010496 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.8078 + + 15 + 1 1.966 78150.5 1.0 5091 4445 9536 SUDHL4_400M_050219_1,9538 SUDHL4_400M_050219_1,9538,PKTLRMVKLAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9539 52.522 318.0 411840.0 25 0 56088.0 + 31512 RQGILALQL 9 96 506.3185567034012 1010.6225604736024 2 506.3169738650322 MULTI CID FTMS 0 0 0 9536 215992.78125 0.3553603624632314 -2 0.1259765625 3 Unmodified _RQGILALQL_ ENSG00000198198|ENST00000634258|SZT2;nc|ENSG00000198198|Q5T011-4|SZT2;nc|ENSG00000198198|Q5T011-5|SZT2 39.957323273325 0.0756908302845263 5 [{I|L}A]GK[TP]A{I|L}Q{I|L} 10 5 + 65.938 0.0 0.0 6.5245 6.5245 63.49 0.0 0.0 0.0 11.007885305533309 15.026975159433531 11.007885305533309 0.0 0 0.7614393726401688 1.154901959985743 0.0 0.6139829889124311 [{I|L}A]GK[TP]A{I|L}Q{I|L};[{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[{I|L}A][RN]{I|L}A{I|L}Q{I|L};[{I|L}A]GK[TP]A{I|L}[AG]{I|L};[{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};[Q{I|L}]{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[Q{I|L}]K[TP]A{I|L}Q{I|L};[{I|L}A][RN]{I|L}A{I|L}[AG]{I|L};[Q{I|L}]{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};[Q{I|L}]K[TP]A{I|L}[AG]{I|L} 6.5245;6.5245;5.8782;5.6177;5.6177;5.4353;5.4353;4.967;4.5241;4.5241 -;-;-;-;-;-;-;-;-;- 700 1 1.966 103053.1 1.0 5092 4445 9536 SUDHL4_400M_050219_1,9539 SUDHL4_400M_050219_1,9539,RQGILALQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9540 52.536 800.0 243060.0 25 0 55720.0 + 16720 KEVINRIQRL 10 132 634.8932952211968 1267.7720375091935 2 634.8930541872978 MULTI CID FTMS 0 0 0 9536 147002.828125 0.2556293343798863 3 -0.2646675109863281 4 Unmodified _KEVINRIQRL_ REV__ENSG00000101972|ENST00000371145|STAG2;REV__nc|ENSG00000101972|Q8N3U4|STAG2 4.715918219556657 0.704822610516493 5 {[VA]|[{I|L}G]}S{I|L}VK 6 -1 17.971 0.0 0.0 1.4175 0.0 0.0 0.0 667.3751279006049 667.3751279006049 8.137773064314725 0.0 0.0 0.0 0 0.0 0.6020599913279624 1.201163485412895 0.0 {[VA]|[{I|L}G]}S{I|L}VK 1.4175 - 161 1 1.966 150122.5 0.5400000214576721 5093 4445 9536 SUDHL4_400M_050219_1,9540 SUDHL4_400M_050219_1,9540,KEVINRIQRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9541 52.55 800.0 205250.0 25 0 14796.0 + 30533 RELEKLFQL 9 145 588.3423972240247 1174.6702415148493 2 588.3425781130791 MULTI CID FTMS 0 0 0 9536 86653.84375 0.5353594151156644 -1 0.1073722839355468 5 Unmodified _RELEKLFQL_ ENSG00000164611|ENST00000352433|PTTG1;ENST00000519287.1_1_5:159849240-159855685:+|nuORF;nc|ENSG00000213005|Q9NZH4|PTTG3P 43.9818466556824 0.0535980856389242 5 {[QN]|[E{I|L}]|[KN]}REK{I|L}{M(Oxidation (M))|F}Q{I|L} 9 2 + 71.227 0.0 0.0 6.0635 6.0635 90.879 0.0 0.0 0.0 14.18121238009023 57.14154702346333 14.18121238009023 9.208187539523763 0 1.2571810378154735 0.8538719643217619 0.4247425010840047 0.3807196863200844 {[QN]|[E{I|L}]|[KN]}REK{I|L}{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}REK{I|L}{M(Oxidation (M))|F}[AG]{I|L};{[RE]|[WV]}{I|L}EK{I|L}{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}K{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}Q{I|L};{[RE]|[WV]}{I|L}EK{I|L}{M(Oxidation (M))|F}[AG]{I|L};[Q{I|L}]Q{[SA]|[TG]}K{I|L}{M(Oxidation (M))|F}Q{I|L};[{I|L}T]R{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}K{[RE]|[WV]}{I|L}{M(Oxidation (M))|F}[AG]{I|L};[{I|L}A][DV]EK{I|L}{M(Oxidation (M))|F}Q{I|L};[{I|L}A]GQ{[SA]|[TG]}K{I|L}{M(Oxidation (M))|F}Q{I|L} 6.0635;5.2797;4.6738;4.3174;3.8899;3.6726;3.5339;3.5335;3.3257;3.0731 -;-;+;-;-;-;-;-;-;- + 559 1 1.966 126562.7 0.4199999868869781 5094 4445 9536 SUDHL4_400M_050219_1,9541 SUDHL4_400M_050219_1,9541,RELEKLFQL True True RELEKLFQL 52.549998 588.342578113079 878976.75 9536.0 ENST00000519287.1_1_5:159849240-159855685:+|nuORF;;ENSG00000164611|ENST00000352433|PTTG1;;nc|ENSG00000213005|Q9NZH4|PTTG3P 5.150743007659912 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9543 52.557 259.0 456410.0 25 0 39131.0 -1 0 93 914.4349408521616 1826.855328771124 2 914.9371215701104 MULTI CID FTMS 0 0 0 9542 372289.4375 0.451886334556797 2 -0.2159767150878906 1 5 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YEV 14 -1 90.755 0.0 0.0 4.9678 0.0 0.0 0.0 127.0662660720292 127.0662660720292 63.307386474837486 0.0 0.0 0.0 0 0.3054621874040891 1.154901959985743 0.0 1.1237125054200234 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YEV 4.9678 - 1815 1 1.966 81822.4 1.0 5095 4446 9542 SUDHL4_400M_050219_1,9543 SUDHL4_400M_050219_1,9543, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9544 52.571 800.0 231760.0 25 0 51836.0 + 9633 FLMPTSSEL 9 124 1024.5022981330476 1023.4950216664477 1 1024.506518542767 MULTI CID FTMS 0 0 0 9542 204126.40625 0.6492435301469266 2 -0.2159767150878906 2 Unmodified _FLMPTSSEL_ ENSG00000151849|ENST00000381884|CENPJ;nc|ENSG00000151849|Q9HC77-2|CENPJ 100.37149154755038 0.0107586824602606 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MPTSSE{I|L} 9 0 + 65.752 0.0 0.0 6.4242 6.4242 89.467 0.0 0.0 0.0 7.147642715192511 20.00636805812492 7.147642715192511 8.481362441963334 0 1.045114016114533 0.0 1.5 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MPTSSE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MPTCAE{I|L};[KS]SSRSME{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ERSME{I|L};[KS]SWTSSE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ERSEM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PMTSSE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MPT[DG]M{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}ACTPME{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}RSME{I|L} 6.4242;5.5956;5.2212;5.1155;5.0365;5.0213;4.9587;4.9405;4.8586;4.8562 +;-;-;-;-;-;-;-;-;- + 2322 1 1.966 121513.0 0.7599999904632568 5096 4446 9542 SUDHL4_400M_050219_1,9544 SUDHL4_400M_050219_1,9544,FLMPTSSEL True True FLMPTSSEL 52.571243 1024.50651854277 2349560.5 9542.0 nc|ENSG00000151849|Q9HC77-2|CENPJ;;ENSG00000151849|ENST00000381884|CENPJ 7.964931964874268 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9545 52.585 800.0 56060.0 25 0 11512.0 + 27539 PKVIQRHKKWK 11 78 724.4510413893836 1446.887529845567 2 724.4501220583916 MULTI CID FTMS 0 0 0 9542 116570.78125 0.4193653193779669 5 -0.4475593566894531 3 Unmodified _PKVIQRHKKWK_ REV__ENSG00000186160|ENST00000334194|CYP4Z1;REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P;REV__nc|ENSG00000290456|Q8N1L4|CYP4Z2P 1.1933415558491238 0.8695176722560516 5 VAV 3 -1 11.682 0.0 0.0 0.80742 0.0 0.0 853.5318912731046 321.15644251041255 1174.6883337835172 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VAV 0.80742 - 111 + 1 1.966 38346.5 0.4699999988079071 5097 4446 9542 SUDHL4_400M_050219_1,9545 SUDHL4_400M_050219_1,9545,PKVIQRHKKWK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9546 52.599 800.0 259400.0 25 0 41580.0 + + 20790 RAAPPLLTL 9 158 476.3210213870838 950.6274898409677 2 476.3218871951103 MULTI CID FTMS 0 0 0 9542 96146.78125 0.0072354969522976 15 -1.1849327087402344 4 Unmodified _LLVRGPLAL_ ENST00000262518.8_1_16:30710550-30715400:+|nuORF;ENST00000411466.6_3_16:30709553-30715400:+|nuORF 28.486842064014134 0.1687311288560894 5 {I|L}{I|L} 2 -1 36.498 0.0 0.0 3.8394 0.0 0.0 0.0 721.4365677270712 721.4365677270712 14.19826684399597 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {I|L}{I|L} 3.8394 + + 159 + 1 1.966 159634.3 0.8600000143051147 5098 4446 9542 SUDHL4_400M_050219_1,9546 SUDHL4_400M_050219_1,9546,LLVRGPLAL False False RAAPPLLTL 52.598891 476.32188719511 899340.5 9542.0 ENST00000262518.8_1_16:30710550-30715400:+|nuORF;;ENST00000411466.6_3_16:30709553-30715400:+|nuORF 1.9679282506306963 2.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9547 52.613 800.0 145730.0 25 0 6416.7 + 44245 YLISELEAA 9 115 1008.5240277800332 1007.5167513134332 1 1008.522448718548 MULTI CID FTMS 0 0 0 9542 169755.40625 0.9504077726603232 1 -0.1289024353027343 5 Unmodified _YLISELEAA_ ENSG00000119812|ENST00000238823|FAM98A;ENST00000474985.5_1_2:33809845-33813599:-|nuORF 92.8221339359638 0.0138398038803217 5 {[QN]|[E{I|L}]|[KN]}SY{I|L}E{I|L}AA 9 4 + 88.9 0.0 0.0 8.8237 8.8237 85.049 0.0 0.0 0.0 0.0189242944374541 10.91969376659469 0.0189242944374541 0.0189242944374541 0 0.4896518287104437 0.8860566476931632 2.353917193908117 0.0 {[QN]|[E{I|L}]|[KN]}SY{I|L}E{I|L}AA;[Y{I|L}]{I|L}SEE{I|L}AA;[Y{I|L}]ES{I|L}E{I|L}AA;[Y{I|L}]{I|L}ESE{I|L}AA;[Y{I|L}]SE{I|L}E{I|L}AA;{[QN]|[E{I|L}]|[KN]}SY{I|L}EA{I|L}A;[Y{I|L}]{I|L}SEEA{I|L}A;{[QN]|[E{I|L}]|[KN]}S{I|L}YE{I|L}AA;[Y{I|L}]ES{I|L}EA{I|L}A;{[QN]|[E{I|L}]|[KN]}SY{I|L}{I|L}EAA 8.8237;8.8218;8.7139;8.5352;8.4606;8.3811;8.3793;8.2768;8.2714;8.2702 -;-;-;-;-;-;-;-;-;- 6719 1 1.966 78748.2 0.6299999952316284 5099 4446 9542 SUDHL4_400M_050219_1,9547 SUDHL4_400M_050219_1,9547,YLISELEAA True True YLISELEAA 52.612756 1008.52244871855 1357164.125 9542.0 ENST00000474985.5_1_2:33809845-33813599:-|nuORF;;ENSG00000119812|ENST00000238823|FAM98A 6.4675882657368975 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9548 52.627 800.0 136410.0 25 0 39733.0 + 20701 LLRRAIEPNGL 11 95 417.92214494321627 1250.744605429849 3 417.9220153689384 MULTI CID FTMS 0 0 0 9542 145113.4375 0.4350727699385359 4 -0.3521728515625 6 Unmodified _LLRRAIEPNGL_ REV__ENSG00000123080|ENST00000371761|CDKN2C 1.3295316138638542 0.8688751186870782 5 {I|L} 1 -1 9.6041 0.0 0.0 0.76787 0.0 0.0 1119.6494801630504 0.0 1119.6494801630504 0.0 9.119543704721591 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.76787 + + 7 + 1 1.966 90871.2 0.4900000095367431 5100 4446 9542 SUDHL4_400M_050219_1,9548 SUDHL4_400M_050219_1,9548,LLRRAIEPNGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9549 52.642 800.0 121550.0 25 0 12513.0 + -1 GLAPAEVVVATV 12 126 563.3289970136311 562.3217205470311 1 563.3294555544853 MULTI CID FTMS 0 0 0 9542 119178.90625 1.0 0 0.0 7 ENSG00000196588|ENST00000355630|MRTFA;nc|ENSG00000196588|Q969V6|MRTFA 5 {[VA]|[{I|L}G]}TVP 5 -1 32.976 0.0 0.0 5.8643 0.0 0.0 0.0 92.02271476994044 92.02271476994044 10.440228147639203 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3054621874040891 0.0 {[VA]|[{I|L}G]}TVP 5.8643 - 284 1 1.966 77808.4 0.4699999988079071 5101 4446 9542 SUDHL4_400M_050219_1,9549 SUDHL4_400M_050219_1,9549, False False GLAPAEVVVATV 52.641866 563.329455554485 817510.875 9542.0 ENSG00000196588|ENST00000355630|MRTFA;;nc|ENSG00000196588|Q969V6|MRTFA 3.5595430533091226 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9550 52.653 638.0 338960.0 25 0 34509.0 + 2911 AVFPHLTVV 9 180 491.78988292833554 0 491.7893859744072 PEAK CID FTMS 0 0 0 9542 101519.1484375 0.8734617986988465 -2 0.1560630798339843 8 Unmodified _AVFPHLTVV_ ENSG00000134825|ENST00000537328|TMEM258 74.39630413441286 0.0184719807553707 5 AV{M(Oxidation (M))|F}PT 5 4 27.502 0.0 0.0 2.8018 0.0 0.0 216.1476847025711 247.1205549862869 463.268239688858 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 1.9634679910804405 0.0 AV{M(Oxidation (M))|F}PT 2.8018 - 723 + 1 1.966 164588.8 1.0 5102 4446 9542 SUDHL4_400M_050219_1,9550 SUDHL4_400M_050219_1,9550,AVFPHLTVV True True AVFPHLTVV 52.652972 491.789385974407 1141827.375 9542.0 ENSG00000134825|ENST00000537328|TMEM258 4.327840963999431 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9551 52.668 800.0 165420.0 25 0 85474.0 22805 LQWKVKLP 8 77 1011.6325685018002 1010.6252920352 1 1011.632311999798 MULTI CID FTMS 0 0 0 9542 85085.6328125 0.2610627379320555 -2 0.1560630798339843 9 Unmodified _LQWKVKLP_ ENSG00000143409|ENST00000683666|MINDY1;nc|ENSG00000143409|Q8N5J2-2|MINDY1;nc|ENSG00000143409|Q8N5J2-3|MINDY1;nc|ENSG00000143409|Q8N5J2-4|MINDY1 2.577480529830294 0.808687252328423 5 {M(Oxidation (M))|F} 1 8 2.4743 0.0 0.0 0.24482 0.0 0.0 80.19030775961262 780.3430880182249 860.5333957778375 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.24482 - 16 + 1 1.966 90845.9 0.449999988079071 5103 4446 9542 SUDHL4_400M_050219_1,9551 SUDHL4_400M_050219_1,9551,LQWKVKLP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9552 52.679 625.0 128660.0 25 0 17937.0 + 42110 VRMRAVAP 8 124 450.2656738162041 0 450.2656738162041 PEAK CID FTMS 0 0 0 -1 0 10 Unmodified _VRMRAVAP_ REV__ENSG00000134853|ENST00000257290|PDGFRA 2.577480529830294 0.5910327097116076 5 Y 1 -1 0.48455 0.0 0.0 0.053928 0.0 0.0 510.34288830448014 222.0887850397094 732.4316733441896 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.053928 - 4 + 1 1.966 65179.4 1.0 5104 4446 9542 SUDHL4_400M_050219_1,9552 SUDHL4_400M_050219_1,9552,VRMRAVAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9554 52.684 64.0 1341400.0 25 0 188280.0 + 33880 SLFPGKLEV 9 78 495.2869964050322 988.5594398768644 2 495.2871581912041 MULTI CID FTMS 0 0 0 9553 1071911.625 0.7895127017895592 1 -0.0870742797851562 1 Unmodified _SLFPGKLEV_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 26.268140514670165 0.1969607489560049 5 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}PGG 9 6 54.944 0.0 0.0 5.558 0.0 0.0 0.0 68.05133997134999 68.05133997134999 41.44910623973964 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}PGG 5.558 - 196 + 1 1.966 74154.8 1.0 5105 4447 9553 SUDHL4_400M_050219_1,9554 SUDHL4_400M_050219_1,9554,SLFPGKLEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9555 52.687 140.0 389350.0 25 0 32626.0 38060 TPGFCTAIVSL 11 90 554.7872045198795 1107.559856106559 2 554.7876464724541 MULTI CID FTMS 0 0 0 9553 168670.15625 0.1174565879509095 3 -0.2232704162597656 2 Unmodified _TPGFCTAIVSL_ ENSG00000107185|ENST00000378078|RGP1;ENST00000496906.1_1_9:35750742-35753913:+|nuORF 22.736283301280096 0.5583477779825423 5 {[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}W{I|L}{M(Oxidation (M))|F}Q{I|L} 9 7 + 29.823 0.0 0.0 2.6927 2.6927 78.397 0.0 0.0 0.0 6.134894531087443 7.374752604298326 6.134894531087443 6.134894531087443 0 0.242992819099939 1.3010299956639813 0.0 0.0 {[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}W{I|L}{M(Oxidation (M))|F}Q{I|L};{I|L}{I|L}D{I|L}[C(Carbamidomethyl (C))S]{M(Oxidation (M))|F}Q{I|L};{I|L}{I|L}D[C(Carbamidomethyl (C))S]{I|L}{M(Oxidation (M))|F}Q{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}{I|L}WQ{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}Q{I|L};[DV]{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{M(Oxidation (M))|F}Q{I|L};{I|L}{I|L}DV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}Q{I|L};{[TV]|[{I|L}S]}{[DS]|[MA]|[CV]|TT}W{I|L}{[MG]|[TS]}{[TV]|[{I|L}S]};[DV]{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{M(Oxidation (M))|F}Q{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{M(Oxidation (M))|F}{I|L}W{[ES]|[DT]|[{I|L}C]}PA 2.6927;2.1388;1.9798;1.9297;1.8613;1.7945;1.6476;1.578;1.4623;1.1091 -;-;-;-;-;-;-;-;-;- 386 1 1.966 48108.9 1.0 5106 4447 9553 SUDHL4_400M_050219_1,9555 SUDHL4_400M_050219_1,9555,TPGFCTAIVSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9556 52.691 224.0 592640.0 25 0 85433.0 + 17314 KLTDIQIEL 9 117 536.8158644494475 1071.617175965695 2 536.8162109255791 MULTI CID FTMS 0 0 0 9553 576980.8125 1.0 0 0.0 3 Unmodified _KLTDIQIEL_ ENSG00000176049|ENST00000616793|JAKMIP2;ENSG00000188385|ENST00000684848|JAKMIP3;nc|ENSG00000176049|Q96AA8-2|JAKMIP2;nc|ENSG00000176049|Q96AA8|JAKMIP2;nc|ENSG00000188385|Q5VZ66|JAKMIP3 82.5293158979368 0.0169039238599547 5 {[QN]|[E{I|L}]|[KN]}SK{I|L}Q{I|L}E{I|L} 9 3 + 99.645 0.0 0.0 9.2986 9.2986 92.863 0.0 0.0 0.0 18.494850021680094 16.478174818886373 16.478174818886373 7.231423671422917 0 0.75 1.3010299956639813 1.646591250700361 0.805462187404089 {[QN]|[E{I|L}]|[KN]}SK{I|L}Q{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}SKQ{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}SK{I|L}[AG]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}SQK{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NTK{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}SK[AG]{I|L}{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}SK{I|L}QE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}SQ{I|L}K{I|L}E{I|L};[{I|L}T]DK{I|L}Q{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}QSK{I|L}{I|L}E{I|L} 9.2986;8.6238;8.4393;7.9876;7.8232;7.7645;7.7583;7.6923;7.5727;7.5423 -;-;-;-;-;-;-;-;-;- 3158 1 1.966 104037.5 1.0 5107 4447 9553 SUDHL4_400M_050219_1,9556 SUDHL4_400M_050219_1,9556,KLTDIQIEL True True KLTDIQIEL 52.691397 536.816210925579 3754257.5 9553.0 nc|ENSG00000188385|Q5VZ66|JAKMIP3;;nc|ENSG00000176049|Q96AA8|JAKMIP2;;ENSG00000176049|ENST00000616793|JAKMIP2;;ENSG00000188385|ENST00000684848|JAKMIP3;;nc|ENSG00000176049|Q96AA8-2|JAKMIP2 2.400317827860514 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9557 52.694 140.0 844600.0 25 0 135440.0 + 37896 TLWPEVQKL 9 101 557.3187460072519 1112.6229390813037 2 557.3188964724541 MULTI CID FTMS 0 0 0 9553 490506.75 0.6292327506970533 -3 0.2849655151367187 4 Unmodified _TLWPEVQKL_ ENSG00000134759|ENST00000358232|ELP2;ENST00000541294.1_1_18:33739943-33744659:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 53.832793166522166 0.0319663582346103 5 [{I|L}T]WPEVQK{I|L} 9 0 + 74.853 0.0 0.0 6.7276 6.7276 91.904 0.0 0.0 0.0 41.70486885197654 10.819780406476909 10.819780406476909 9.208187539523747 0 0.805462187404089 1.6989700043360187 0.3807196863200844 1.4731975075880328 + + [{I|L}T]WPEVQK{I|L};[{I|L}T]WPEV[AG]K{I|L};[{I|L}T]W{I|L}[DP]QK{I|L};[{I|L}T]W{I|L}[DP][AG]K{I|L};[{I|L}T]W{I|L}[QT][VG][VP];[{I|L}T]WRRW[VP];[{I|L}T]QW[{I|L}A][VS][VP];[{I|L}T]{[DA]|[EG]}PE[KA]R{I|L};[{I|L}T]WQ[{I|L}A][VS][VP];[EP]VQK{I|L}{[CT]|[{M(Oxidation (M))|F}G]}[VP] 6.7276;5.9;5.8335;5.0059;3.7771;3.7008;3.6904;3.5671;3.1694;3.0049 +;-;-;-;-;-;-;-;-;- + 718 + 1 1.966 91084.5 1.0 5108 4447 9553 SUDHL4_400M_050219_1,9557 SUDHL4_400M_050219_1,9557,TLWPEVQKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9558 52.698 216.0 921220.0 25 0 58776.0 28513 PTLQEVILANL 11 137 605.8557385267492 1209.6969241202985 2 605.8559448122978 MULTI CID FTMS 0 0 0 9553 397657.8125 0.0082030155087065 -3 0.2849655151367187 5 Unmodified _PTLQEVILANL_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 40.23920728925047 0.2087110615831976 5 [TP]AAVD{I|L}{I|L}{I|L}V[QA] 12 8 + 72.899 0.0 0.0 6.0262 6.0262 85.56 0.0 0.0 0.0 10.418829777062086 5.623343384664864 5.623343384664864 4.2609125905568135 0 0.6505149978319906 1.2218487496163564 2.3533250495939875 0.0 [TP]AAVD{I|L}{I|L}{I|L}V[QA];[TP]AAV{I|L}D{I|L}{I|L}V[QA];[TP]AAV{I|L}{I|L}EVV[QA];[TP]AAV{I|L}{I|L}D{I|L}V[QA];[TP]AAVRRAAV[QA];{I|L}{I|L}DV{I|L}[TP]AAV[QA];[TP]AAV{I|L}[KA]AAV[QA];[TP]A{I|L}GD{I|L}{I|L}{I|L}V[QA];{I|L}{I|L}D{I|L}V[TP]AAV[QA];{I|L}{I|L}DV{I|L}A[TP]AV[QA] 6.0262;5.674;5.4034;5.2595;5.2491;5.1649;5.1549;5.0212;5.0194;4.8138 -;-;-;-;-;-;-;-;-;- 6588 1 1.966 144921.3 1.0 5109 4447 9553 SUDHL4_400M_050219_1,9558 SUDHL4_400M_050219_1,9558,PTLQEVILANL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9559 52.701 154.0 763360.0 25 0 95757.0 + 17418 KMWEEAISL 9 129 553.7810239063598 1105.5474948795195 2 553.7814819216728 MULTI CID FTMS 0 0 0 9553 355576.78125 0.3451355884319371 -2 0.1775932312011718 6 Unmodified _KMWEEAISL_ ENSG00000134516|ENST00000520908|DOCK2;ENST00000523351.5_1_5:169188379-169509859:+|nuORF 66.45667989310934 0.0225072657982126 5 {NN|[MP]|[D{I|L}]|[EV]}VDN{M(Oxidation (M))|F}A{I|L}S{I|L} 10 5 + 82.458 0.0 0.0 7.4586 7.4586 87.513 0.0 0.0 0.0 3.1068946292104016 16.53212513775344 3.1068946292104016 3.1068946292104016 0 0.9247425010840048 1.5228787452803376 1.829689690656103 0.0 {NN|[MP]|[D{I|L}]|[EV]}VDN{M(Oxidation (M))|F}A{I|L}S{I|L};[WM]KEEA{I|L}S{I|L};{[TV]|[{I|L}S]}A{[CA]|SS}EEA{I|L}S{I|L};[WM]EKEA{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}VDGG{M(Oxidation (M))|F}A{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}VDNA{M(Oxidation (M))|F}{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}[C(Carbamidomethyl (C))C]A{I|L}S{I|L};[WE]MKEA{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}VDN{M(Oxidation (M))|F}{I|L}AS{I|L};{I|L}{I|L}DV[C(Carbamidomethyl (C))C]A{I|L}S{I|L} 7.4586;7.1776;7.1073;7.1059;6.6296;6.5979;6.5731;6.5453;6.5298;6.3885 -;-;-;-;-;-;-;-;-;- 4730 1 1.966 90064.3 1.0 5110 4447 9553 SUDHL4_400M_050219_1,9559 SUDHL4_400M_050219_1,9559,KMWEEAISL True True KMWEEAISL 52.701378 553.781481921673 5309704.0 9553.0 ENST00000523351.5_1_5:169188379-169509859:+|nuORF;;ENSG00000134516|ENST00000520908|DOCK2 4.966693878173828 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9560 52.706 253.0 740120.0 25 0 54404.0 + + 30453 ALWDIETGQQTV 12 142 680.8411630793622 1359.6677732255243 2 680.8410522341728 MULTI CID FTMS 0 0 0 9553 240815.40625 0.1977123981778043 -2 0.1775932312011718 7 Unmodified _RDTWGNQRQSL_ ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000172354|P62879-2|GNB2 28.49450938151212 0.4231428536161201 5 [AG]TGQA{I|L}ETGQQ{[TV]|[{I|L}S]} 14 -1 + 78.654 0.0 0.0 5.7848 5.7848 80.491 0.0 0.0 0.0 3.219194935898884 7.569619513137056 3.219194935898884 0.7010752059608905 0 1.0356668758921828 1.6989700043360187 1.1791746928241125 0.4247425010840047 [AG]TGQA{I|L}ETGQQ{[TV]|[{I|L}S]};[AG]GTQA{I|L}ETGQQ{[TV]|[{I|L}S]};[AG]TGQA{I|L}TEGQQ{[TV]|[{I|L}S]};[AG]GTQA{I|L}TEGQQ{[TV]|[{I|L}S]};[AG]GQTA{I|L}ETGQQ{[TV]|[{I|L}S]};[AG]QGTA{I|L}ETGQQ{[TV]|[{I|L}S]};[AG]GQTA{I|L}TEGQQ{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}WA{I|L}ETGQQ{[TV]|[{I|L}S]};[QT]GQA{I|L}ETGQQ{[TV]|[{I|L}S]};[AG]QGTA{I|L}TEGQQ{[TV]|[{I|L}S]} 5.7848;5.7332;5.7167;5.6651;5.6215;5.5714;5.5534;5.548;5.5219;5.5033 -;-;-;-;-;-;-;-;-;- 108666 1 1.966 135404.2 1.0 5111 4447 9553 SUDHL4_400M_050219_1,9560 SUDHL4_400M_050219_1,9560,RDTWGNQRQSL False False ALWDIETGQQTV 52.70609 680.841052234173 15193838.0 9553.0 ENSG00000172354|ENST00000303210|GNB2;;nc|ENSG00000172354|P62879-2|GNB2 6.915579001108806 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9561 52.717 636.0 275750.0 25 0 38460.0 + 13922 HWEIEPEPK 9 137 582.7858445113167 1163.5571360894332 2 582.7855712771416 MULTI CID FTMS 0 0 0 9553 166314.0625 1.0 0 0.0 8 Unmodified _HWEIEPEPK_ REV__ENSG00000124006|ENST00000404537|OBSL1;REV__ENST00000465149.1_1_2:220420747-220435459:-|nuORF;REV__nc|ENSG00000124006|O75147-1|OBSL1;REV__nc|ENSG00000124006|O75147-2|OBSL1;REV__nc|ENSG00000124006|O75147-4|OBSL1 25.399314129420983 0.2080152500878129 5 {I|L}{I|L}DEQ{I|L} 6 -1 62.418 0.0 0.0 5.3644 0.0 0.0 0.0 449.1518355177074 449.1518355177074 32.92649237128065 0.0 0.0 0.0 0 1.1382104921644451 2.0 0.9674165578762486 0.6747425010840047 {I|L}{I|L}DEQ{I|L} 5.3644 - 1026 1 1.966 132288.3 1.0 5112 4447 9553 SUDHL4_400M_050219_1,9561 SUDHL4_400M_050219_1,9561,HWEIEPEPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9562 52.731 800.0 201690.0 25 0 16060.0 + 29616 QLYNQIIKL 9 145 566.84012085357 1131.66568877394 2 566.8400146365166 MULTI CID FTMS 0 0 0 9553 151926.328125 0.949768552593394 1 -0.0870742797851562 9 Unmodified _QLYNQIIKL_ ENSG00000174780|ENST00000642900|SRP72 47.594388314883695 0.0456443387682827 5 [Q{I|L}]N{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}VK{I|L} 10 5 + 44.931 0.0 0.0 3.9703 3.9703 80.755 0.0 0.0 0.0 9.189918721537827 27.518102261646728 9.189918721537827 6.020599913279625 0 1.3539171939081172 1.6989700043360187 0.3054621874040891 0.2887254899964357 [Q{I|L}]N{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}VK{I|L};[Q{I|L}]NYAA{I|L}VK{I|L};[Q{I|L}]N{[SA]|[TG]}{I|L}{M(Oxidation (M))|F}VK{I|L};[Q{I|L}]GG{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}VK{I|L};[Q{I|L}]NY{I|L}AAVK{I|L};[Q{I|L}]NY[RV]VK{I|L};[AG][KQ]E{M(Oxidation (M))|F}{I|L}VK{I|L};[Q{I|L}]NY{I|L}Q{I|L}K{I|L};[Q{I|L}]GGYAA{I|L}VK{I|L};[Q{I|L}]GG{[SA]|[TG]}{I|L}{M(Oxidation (M))|F}VK{I|L} 3.9703;3.4383;3.3527;3.1605;2.9063;2.8611;2.8064;2.762;2.6285;2.5428 -;-;-;-;-;-;-;-;-;- 1564 1 1.966 126791.3 0.5400000214576721 5113 4447 9553 SUDHL4_400M_050219_1,9562 SUDHL4_400M_050219_1,9562,QLYNQIIKL True True QLYNQIIKL 52.731022 566.840014636517 1166089.25 9553.0 ENSG00000174780|ENST00000642900|SRP72 2.3431209723154702 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9563 52.745 800.0 102570.0 25 0 12363.0 + 20825 LLYDLADQLHA 11 98 636.3356416128995 1270.656730292599 2 636.3360473513603 MULTI CID FTMS 0 0 0 9553 126450.6171875 1.0 0 0.0 10 Unmodified _LLYDLADQLHA_ ENSG00000140374|ENST00000557943|ETFA;ENST00000559075.5_1_15:76523658-76603729:-|nuORF;ENST00000559758.5_1_15:76566725-76584849:-|nuORF;nc|ENSG00000140374|P13804-2|ETFA 52.19289622718417 0.1054858033429684 5 {I|L}{I|L}YD{I|L}ADQ{I|L}[HA] 11 0 + 110.3 0.0 0.0 8.6803 8.6803 96.889 0.0 0.0 0.0 85.86034225422108 4.981979378655879 4.981979378655879 14.128498242811006 0 0.9247425010840048 2.0 1.610924374808178 0.5 + + {I|L}{I|L}YD{I|L}ADQ{I|L}[HA];{I|L}{I|L}YD{I|L}AD[AG]{I|L}[HA];{I|L}{I|L}YD{I|L}WQ{I|L}[HA];{I|L}{I|L}YD{I|L}[YV]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{I|L}{I|L}YD[YV]{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{I|L}{I|L}YD{I|L}W[AG]{I|L}[HA];{I|L}{I|L}Y[W{I|L}]DQ{I|L}[HA];{I|L}{I|L}[EP][WQ]{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{I|L}{I|L}Y[W{I|L}]D[AG]{I|L}[HA];{I|L}{I|L}[HD][C(Carbamidomethyl (C))K]{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 8.6803;7.5684;7.5289;7.0456;6.6521;6.4142;6.231;5.2076;5.1162;4.8321 +;-;-;-;-;-;-;-;-;- + 1068 + 1 1.966 70367.6 0.4900000095367431 5114 4447 9553 SUDHL4_400M_050219_1,9563 SUDHL4_400M_050219_1,9563,LLYDLADQLHA True True LLYDLADQLHA 52.744859 636.33604735136 776415.3125 9553.0 ENST00000559758.5_1_15:76566725-76584849:-|nuORF;;ENSG00000140374|ENST00000557943|ETFA;;nc|ENSG00000140374|P13804-2|ETFA;;ENST00000559075.5_1_15:76523658-76603729:-|nuORF 8.19106944402059 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9564 52.759 800.0 208200.0 25 0 15259.0 9250 FHFLFQAF 8 179 528.7669504307228 1055.5193479282457 2 528.8215209841728 MULTI CID FTMS 0 0 0 9553 23764.08984375 0.6141636870131121 2 -0.0961532592773437 11 Unmodified _FHFLFQAF_ ENST00000539240.5_1_12:9102776-9147745:+|nuORF;ENST00000544226.5_1_12:9102776-9161616:+|nuORF 20.871210003555333 0.6025813472596342 5 [Q{I|L}]V{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}QA{M(Oxidation (M))|F} 9 4 + 43.346 0.0 0.0 4.1066 4.1066 79.277 0.0 0.0 0.0 3.813570164499339 7.718542333157771 3.813570164499339 3.813570164499339 0 0.6861818737241735 1.3979400086720375 0.0 0.4634679910804405 [Q{I|L}]V{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}QA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}GV{[MG]|[TS]}{M(Oxidation (M))|F}QA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}G{[WT]|[RM]}{M(Oxidation (M))|F}QA{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}K{[MG]|[TS]}{M(Oxidation (M))|F}QA{M(Oxidation (M))|F};[Q{I|L}]V{[MG]|[TS]}YQA{M(Oxidation (M))|F};{[VA]|[{I|L}G]}SV{[MG]|[TS]}{M(Oxidation (M))|F}QA{M(Oxidation (M))|F};[Q{I|L}]V{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}[AG]A{M(Oxidation (M))|F};{[VA]|[{I|L}G]}S{[WT]|[RM]}{M(Oxidation (M))|F}QA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}G{I|L}{[CA]|SS}{M(Oxidation (M))|F}QA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}GV[TA]YQA{M(Oxidation (M))|F} 4.1066;3.7453;3.5785;3.5492;3.5362;3.3683;3.2342;3.2015;3.1749;3.1749 -;-;-;-;-;-;-;-;-;- 4275 1 1.966 132386.9 0.4099999964237213 5115 4447 9553 SUDHL4_400M_050219_1,9564 SUDHL4_400M_050219_1,9564,FHFLFQAF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9565 52.763 120.0 403340.0 25 0 35579.0 40662 VLEPEGSPSL 10 91 514.2701114075799 1026.5256698819596 2 514.7725097537041 MULTI CID FTMS 0 0 0 9553 211118.046875 1.0 0 0.0 12 Unmodified _VLEPEGSPSL_ ENSG00000172175|ENST00000649217|MALT1;nc|ENSG00000172175|Q9UDY8-2|MALT1 13.90604991867851 0.6142120002215601 5 [DP]{I|L}{I|L}E 5 9 23.6 0.0 0.0 2.2991 0.0 0.0 0.0 456.2108865169784 456.2108865169784 6.366895680810117 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [DP]{I|L}{I|L}E 2.2991 - 111 1 1.966 44748.8 1.0 5116 4447 9553 SUDHL4_400M_050219_1,9565 SUDHL4_400M_050219_1,9565,VLEPEGSPSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9566 52.766 169.0 700570.0 25 0 31112.0 + -1 TLSDVVVGL 9 123 902.4168056674936 1802.8190584017875 2 902.9113036990166 MULTI CID FTMS 0 0 0 9553 143478.0625 0.0891917702572231 -9 0.7210731506347656 13 nc|ENSG00000109911|Q96EB1-2|ELP4;nc|ENSG00000109911|Q96EB1-3|ELP4;ENSG00000109911|ENST00000640961|ELP4 5 [KT]QY{M(Oxidation (M))|F}ADQQAECC(Carbamidomethyl (C))V{I|L} 15 -1 + 88.432 0.0 0.0 4.9052 4.9052 58.835 0.0 0.0 0.0 63.584646644851134 11.29416157934763 11.29416157934763 0.0 0 0.0 0.0 0.6109243748081782 1.2302046884880935 [KT]QY{M(Oxidation (M))|F}ADQQAECC(Carbamidomethyl (C))V{I|L};[KT]QY{M(Oxidation (M))|F}ADQQAECVC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQAECVC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQAECC(Carbamidomethyl (C))V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}YE[{I|L}P];[KT]QY{M(Oxidation (M))|F}ADQ[AG]AECVC(Carbamidomethyl (C)){I|L};[KT]KY{M(Oxidation (M))|F}ADQQAEC[CG]V{I|L};[KT]QY{M(Oxidation (M))|F}ADQQAEC[CG]V{I|L};[KT][AG]Y{M(Oxidation (M))|F}ADQQAECVC(Carbamidomethyl (C)){I|L};[KT]QY{M(Oxidation (M))|F}AD[AG]QAECVC(Carbamidomethyl (C)){I|L} 4.9052;4.9052;4.9052;4.9052;4.8075;4.4043;4.4043;4.4043;4.4043;4.4043 -;-;-;-;-;-;-;-;-;- 6192 + 1 1.966 85557.2 1.0 5117 4447 9553 SUDHL4_400M_050219_1,9566 SUDHL4_400M_050219_1,9566, False False TLSDVVVGL 52.76599 902.911303699017 3150123.0 9553.0 nc|ENSG00000109911|Q96EB1-2|ELP4;;nc|ENSG00000109911|Q96EB1-3|ELP4;;ENSG00000109911|ENST00000640961|ELP4 3.964327653249105 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9568 52.772 87.0 1250800.0 25 0 54074.0 -1 0 98 966.9641569106157 1931.9137608880312 2 966.965869128704 MULTI CID FTMS 0 0 0 9567 624169.8125 0.3944870969398436 1 -0.0090789794921875 1 5 [MN]PN{I|L}NA{M(Oxidation (M))|F}A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L} 16 -1 77.9 0.0 0.0 4.0323 0.0 0.0 0.0 208.0729158990844 208.0729158990844 42.12032417920843 0.0 0.0 0.0 0 1.0994850021680094 1.5228787452803376 0.2742275032520141 1.7689301784845295 [MN]PN{I|L}NA{M(Oxidation (M))|F}A{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}TDAN{I|L} 4.0323 - 8755 + 1 1.966 75730.7 1.0 5118 4448 9567 SUDHL4_400M_050219_1,9568 SUDHL4_400M_050219_1,9568, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9569 52.775 158.0 847450.0 25 0 42978.0 + -1 LLPDNFIAA 9 116 973.9720407061458 1945.929528479092 2 973.973681628704 MULTI CID FTMS 0 0 0 9567 193562.25 0.3552745781610817 2 -0.1361961364746093 2 ENSG00000139684|ENST00000378720|ESD 5 [NP]D{M(Oxidation (M))|F}{I|L}{I|L}{I|L}A[C(Carbamidomethyl (C))D][VP]QS 14 -1 62.709 0.0 0.0 3.2226 0.0 0.0 0.0 373.1567308626756 373.1567308626756 18.30148495936225 0.0 0.0 0.0 0 0.0 0.0 0.6139829889124311 1.9436726795685344 [NP]D{M(Oxidation (M))|F}{I|L}{I|L}{I|L}A[C(Carbamidomethyl (C))D][VP]QS 3.2226 - 11708 1 1.966 94452.3 1.0 5119 4448 9567 SUDHL4_400M_050219_1,9569 SUDHL4_400M_050219_1,9569, False False LLPDNFIAA 52.775073 973.973681628704 6287680.5 9567.0 ENSG00000139684|ENST00000378720|ESD 4.474753061930339 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9571 52.782 214.0 628660.0 25 0 132300.0 + 12626 GVKRGGGG 8 74 687.3913100225373 686.3840335559372 1 687.3927490115166 MULTI CID FTMS 0 0 0 9570 453114.65625 1.0 0 0.0 1 Unmodified _GVKRGGGG_ REV__ENSG00000225830|ENST00000355832|ERCC6;REV__nc|ENSG00000225830|P0DP91|ERCC6 0.7936320650641473 0.8195151834710337 5 {[QN]|[E{I|L}]|[KN]}A{I|L}E{I|L} 6 -1 + 66.828 0.0 0.0 9.7362 9.7362 91.904 0.0 0.0 0.0 11.588709367037282 13.697887582883936 11.588709367037282 5.55462187404089 0 0.7302046884880937 1.3010299956639813 0.809894379144197 0.0 {[QN]|[E{I|L}]|[KN]}A{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}AE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}AE{I|L};{I|L}{I|L}EAE{I|L};{[CP]|[EA]}{I|L}{I|L}E{I|L};{[CP]|[EA]}{I|L}E{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}EA{I|L};{I|L}{I|L}EEA{I|L};[{I|L}A]E{I|L}E{I|L};{[CP]|[EA]}E{I|L}{I|L}{I|L} 9.7362;8.9269;8.7429;8.0478;7.9113;7.102;7.048;6.3529;6.2684;5.5745 -;-;-;-;-;-;-;-;-;- 253 1 1.966 104513.5 1.0 5120 4449 9570 SUDHL4_400M_050219_1,9571 SUDHL4_400M_050219_1,9571,GVKRGGGG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9572 52.789 414.0 56367.0 25 0 7934.4 -1 0 39 970.8480712771416 0 970.8480712771416 PEAK CID FTMS 0 0 0 -1 0 2 5 R 1 -1 8.4113 0.0 0.0 0.43364 0.0 0.0 1371.356102415808 409.2101020552654 1780.5662044710734 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 R 0.43364 - 7 + 1 1.966 25038.2 1.0 5121 4449 9570 SUDHL4_400M_050219_1,9572 SUDHL4_400M_050219_1,9572, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9573 52.792 121.0 770380.0 25 0 131570.0 + 14919 ILMDERTFL 9 72 569.3023112995318 1136.5900696658634 2 569.3026000857353 MULTI CID FTMS 0 0 0 9570 389211.59375 0.96609896029396 -1 0.0090789794921875 3 Unmodified _ILMDERTFL_ ENSG00000115464|ENST00000398571|USP34;ENST00000463046.5_1_2:61417336-61434009:-|nuORF;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34 43.77239144664712 0.0547478964384323 5 {I|L}{I|L}MDE 5 4 68.756 0.0 0.0 6.0493 0.0 0.0 0.0 532.2899874322874 532.2899874322874 54.31872208767466 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.8494850021680094 0.0 + {I|L}{I|L}MDE 6.0493 + + 67 + 1 1.966 73007.1 1.0 5122 4449 9570 SUDHL4_400M_050219_1,9573 SUDHL4_400M_050219_1,9573,ILMDERTFL True True ILMDERTFL 52.791617 569.302600085735 2600455.75 9570.0 nc|ENSG00000115464|Q70CQ2-3|USP34;;ENSG00000115464|ENST00000398571|USP34;;nc|ENSG00000115464|Q70CQ2-2|USP34;;ENST00000463046.5_1_2:61417336-61434009:-|nuORF 4.47212028503418 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9574 52.796 221.0 731000.0 25 0 74550.0 + -1 LIKKCLVCQA 10 110 616.8461122797174 1231.6776716262348 2 616.8467285037041 MULTI CID FTMS 0 0 0 9570 323485.9375 0.2685742807775584 -1 0.0090789794921875 4 2 Carbamidomethyl (C) _LIKKC(Carbamidomethyl (C))LVC(Carbamidomethyl (C))QA_ REV__ENSG00000236287|ENST00000413761|ZBED5 30.63653989081413 0.2803493085145199 5 {I|L}{I|L}{I|L}DVP 6 -1 73.805 0.0 0.0 5.9922 0.0 0.0 0.0 578.2567843072874 578.2567843072874 44.51679766171288 0.0 0.0 0.0 0 1.5044321917401078 2.0 0.0 0.0 {I|L}{I|L}{I|L}DVP 5.9922 - 1596 + 1 1.966 119810.9 1.0 5123 4449 9570 SUDHL4_400M_050219_1,9574 SUDHL4_400M_050219_1,9574,LIKKCLVCQA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9575 52.8 224.0 737100.0 25 0 93856.0 + 44411 YLYPDITRL 9 97 577.3163685513258 1152.6181841694515 2 577.3168823122978 MULTI CID FTMS 0 0 0 9570 321668.15625 0.5941113639664045 -1 0.0090789794921875 5 Unmodified _YLYPDITRL_ ENSG00000131389|ENST00000622186|SLC6A6 66.45667989310934 0.0225072657982126 5 Y{I|L}YPD{I|L}T[R{I|L}] 9 0 + 90.913 0.0 0.0 7.8875 7.8875 91.653 0.0 0.0 0.0 78.19312436819246 16.668177096237002 16.668177096237002 7.257724967479859 0 0.7742275032520141 2.0 0.3807196863200844 1.4291746928241125 + + Y{I|L}YPD{I|L}T[R{I|L}];Y{I|L}{I|L}{M(Oxidation (M))|F}D{I|L}T[R{I|L}];Y{I|L}Y{I|L}[DP]T[R{I|L}];Y{I|L}{I|L}Y[DP]T[R{I|L}];[RH]{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}T[R{I|L}];[RH][WD]G{I|L}T[R{I|L}];[RH]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DP]T[R{I|L}] 7.8875;7.2579;6.4987;5.869;1.4209;0.74581;0.032055 +;-;-;-;-;-;- + 126 + 1 1.966 128345.7 1.0 5124 4449 9570 SUDHL4_400M_050219_1,9575 SUDHL4_400M_050219_1,9575,YLYPDITRL True True YLYPDITRL 52.800044 577.316882312298 3172683.5 9570.0 ENSG00000131389|ENST00000622186|SLC6A6 2.9985945224761963 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9576 52.804 232.0 256160.0 25 0 43505.0 -1 LLEIRCRKRTL 11 86 486.62723570904274 1456.8598777273282 3 486.6274597048759 MULTI CID FTMS 0 0 0 9570 198511.59375 0.6669387671109621 -1 0.0090789794921875 6 Carbamidomethyl (C) _LLEIRC(Carbamidomethyl (C))RKRTL_ ENST00000591360.1_1_18:56203896-56204202:+|nuORF 2.843284757254958 0.8617331327080043 5 YY{M(Oxidation (M))|F}{I|L}{I|L} 5 -1 19.208 0.0 0.0 1.3185 0.0 0.0 0.0 754.4768570576595 754.4768570576595 2.781468406416426 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YY{M(Oxidation (M))|F}{I|L}{I|L} 1.3185 - 80 1 1.966 58419.1 1.0 5125 4449 9570 SUDHL4_400M_050219_1,9576 SUDHL4_400M_050219_1,9576,LLEIRCRKRTL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9577 52.811 391.0 175540.0 25 0 65596.0 39259 VAAPLISG 8 81 727.4349161494745 726.4276396828744 1 729.4380370974541 MULTI CID FTMS 0 0 0 9570 193120.6875 0.745403723531546 -7 0.4632034301757812 7 Unmodified _VAAPLISG_ ENSG00000048707|ENST00000620676|VPS13D;ENST00000460333.5_1_1:12359354-12409038:+|nuORF;ENST00000487188.1_1_1:12371595-12395946:+|nuORF;nc|ENSG00000048707|Q5THJ4-2|VPS13D 2.889219685676258 0.8067950007271085 5 {NN|[MP]|[D{I|L}]|[EV]}E{I|L} 4 6 15.102 0.0 0.0 2.079 0.0 0.0 0.0 253.16763537062755 253.16763537062755 7.143523507912342 0.0 0.0 0.0 0 0.0 0.8860566476931632 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}E{I|L} 2.079 - 41 1 1.966 67056.0 1.0 5126 4449 9570 SUDHL4_400M_050219_1,9577 SUDHL4_400M_050219_1,9577,VAAPLISG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9578 52.82 466.0 166750.0 25 0 61175.0 + 17989 KRRRQYKEVVL 11 87 737.9501959478347 1473.8858389624693 2 737.9518310427666 MULTI CID FTMS 0 0 0 9570 160095.375 1.0 0 0.0 8 Unmodified _KRRRQYKEVVL_ REV__ENSG00000138119|ENST00000359263|MYOF;REV__nc|ENSG00000138119|Q9NZM1-2|MYOF;REV__nc|ENSG00000138119|Q9NZM1-3|MYOF;REV__nc|ENSG00000138119|Q9NZM1-5|MYOF;REV__nc|ENSG00000138119|Q9NZM1-6|MYOF 0.3070304955306653 0.8736993455979228 5 {I|L} 1 -1 9.464 0.0 0.0 0.64211 0.0 0.0 1342.7906984368817 0.0 1342.7906984368817 0.0 8.868018113164613 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.64211 + + 7 + 1 1.966 71849.6 1.0 5127 4449 9570 SUDHL4_400M_050219_1,9578 SUDHL4_400M_050219_1,9578,KRRRQYKEVVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9579 52.827 437.0 228990.0 25 0 10309.0 -1 0 125 888.911895271631 1775.809237610062 2 888.9146606326103 MULTI CID FTMS 0 0 0 9570 156291.21875 0.4871602831408096 -1 0.0090789794921875 9 5 [KT]EY{M(Oxidation (M))|F}AEQQA[CS]C(Carbamidomethyl (C))V{I|L} 15 -1 + 87.877 0.0 0.0 4.9486 4.9486 79.717 0.0 0.0 0.0 1.989700043360188 12.95880017344075 1.989700043360188 1.989700043360188 0 1.0994850021680094 0.0 0.3054621874040891 1.079689690656103 [KT]EY{M(Oxidation (M))|F}AEQQA[CS]C(Carbamidomethyl (C))V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQEA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQEA{M(Oxidation (M))|F}YQ[{I|L}V];[KT]EY{M(Oxidation (M))|F}AEQQA[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AEQQA[CS][CG]V{I|L};[KT]EY{M(Oxidation (M))|F}AE[AG]QA[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}AEQ[AG]A[CS]C(Carbamidomethyl (C))V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQEA{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]EA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]EA{M(Oxidation (M))|F}YK[{I|L}V] 4.9486;4.8365;4.8365;4.667;4.44;4.44;4.44;4.328;4.328;4.328 -;-;-;-;-;-;-;-;-;- 3919 + 1 1.966 73419.5 1.0 5128 4449 9570 SUDHL4_400M_050219_1,9579 SUDHL4_400M_050219_1,9579, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9580 52.838 631.0 437300.0 25 0 100140.0 + + 20699 RAINIALQL 9 167 506.3185567034012 1010.6225604736024 2 506.3185302615166 MULTI CID FTMS 0 0 0 9570 136160.09375 0.2240162841924957 2 -0.222503662109375 10 Unmodified _LLRQQLQL_ ENSG00000172336|ENST00000303151|POP7 32.116972079565 0.368454113111938 5 [{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}Q{I|L} 10 -1 + 57.598 0.0 0.0 5.6992 5.6992 86.365 0.0 0.0 0.0 10.66946789630613 16.53212513775344 10.66946789630613 6.53212513775344 0 0.6505149978319906 1.5228787452803376 0.0 0.0 [{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[{I|L}A][RN]{I|L}A{I|L}Q{I|L};[{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};{[VA]|[{I|L}G]}A{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[Q{I|L}]{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[{I|L}A][RN]{I|L}A{I|L}[AG]{I|L};{[VA]|[{I|L}G]}A{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};[Q{I|L}]{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};[{I|L}A]GRRVVQ{I|L};[TA]P[KG]{I|L}A{I|L}Q{I|L} 5.6992;5.0529;4.7924;4.6435;4.5198;4.1417;3.7367;3.6086;3.0233;2.5862 -;-;-;-;-;-;-;-;-;- 557 1 1.966 209953.4 1.0 5129 4449 9570 SUDHL4_400M_050219_1,9580 SUDHL4_400M_050219_1,9580,LLRQQLQL False False RAINIALQL 52.838477 506.318530261517 7386867.0 9570.0 ENSG00000172336|ENST00000303151|POP7 3.910607020060221 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9581 52.842 201.0 202000.0 25 0 72246.0 43477 WVIRRRHRLLS 11 53 746.4635587620874 1490.9125645909746 2 746.4651367068291 MULTI CID FTMS 0 0 0 9570 113469.3203125 0.8532943317195004 -1 0.0090789794921875 11 Unmodified _WVIRRRHRLLS_ chr7:75157965-75160659|30|46.57|0.39|6.91|-|1|None,NCF1C|1 0.3070304955306653 0.8736993455979228 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.966 43976.5 1.0 5130 4449 9570 SUDHL4_400M_050219_1,9581 SUDHL4_400M_050219_1,9581,WVIRRRHRLLS False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_1 9582 52.857 800.0 226440.0 25 0 53446.0 20943 LNFLRHGKLVL 11 130 655.4079095263819 1308.8012661195637 2 655.4092285037041 MULTI CID FTMS 0 0 0 9570 94514.9921875 0.1631847614572979 -1 0.0090789794921875 12 Unmodified _LNFLRHGKLVL_ ENSG00000100379|ENST00000403888|KCTD17;nc|ENSG00000100379|Q8N5Z5-2|KCTD17 13.042465956692816 0.7638483625850725 5 [TP]AAVQRAVVQ 11 10 73.097 0.0 0.0 5.585 0.0 0.0 0.0 185.1244832428637 185.1244832428637 35.17253306046392 0.0 0.0 0.0 0 0.0 0.744727494896694 1.834121882396211 0.0 [TP]AAVQRAVVQ 5.585 - 9878 1 1.966 135375.4 0.5299999713897705 5131 4449 9570 SUDHL4_400M_050219_1,9582 SUDHL4_400M_050219_1,9582,LNFLRHGKLVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9583 52.871 800.0 87668.0 25 0 6749.4 + -1 YWCQYFVYFWL 11 100 837.873812752447 1673.7330725716938 2 837.8730346560478 MULTI CID FTMS 0 0 0 9570 91368.75 1.0 0 0.0 13 Carbamidomethyl (C) _YWC(Carbamidomethyl (C))QYFVYFWL_ REV__L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|122|1|anti-sense 0.3506318815782774 0.8734936314171269 5 DEAQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 12 -1 65.443 0.0 0.0 3.91 0.0 0.0 248.09150893379064 0.0 248.09150893379064 0.0 45.15276304583878 0.0 0.0 0 0.5 0.0 0.0 0.0 DEAQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 3.91 - 603 1 1.966 51737.8 0.4300000071525574 5132 4449 9570 SUDHL4_400M_050219_1,9583 SUDHL4_400M_050219_1,9583,YWCQYFVYFWL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9584 52.874 116.0 835880.0 25 0 68270.0 + -1 LLLDAMPFDVV 11 67 624.83015096151 1247.6457489898198 2 624.8311645388603 MULTI CID FTMS 0 0 0 9570 84642.4609375 0.1841383247549011 -2 0.0961532592773437 14 Oxidation (M) _LLLDAM(Oxidation (M))PFDVV_ REV__ENSG00000142082|ENST00000382743|SIRT3;REV__nc|ENSG00000142082|Q9NTG7-2|SIRT3 21.53697664764585 0.586507868110548 5 {I|L}{I|L}{I|L}DV 5 -1 62.053 0.0 0.0 4.9736 0.0 0.0 0.0 691.2744182542042 691.2744182542042 16.47476793649915 0.0 0.0 0.0 0 1.25 2.0 0.0 0.0 {I|L}{I|L}{I|L}DV 4.9736 - 90 + 1 1.966 81807.6 1.0 5133 4449 9570 SUDHL4_400M_050219_1,9584 SUDHL4_400M_050219_1,9584,LLLDAMPFDVV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9585 52.887 800.0 142050.0 25 0 3801.8 -1 0 129 1193.2135322997076 3576.618767499323 3 1194.217944324017 MULTI CID FTMS 0 0 0 9570 202313.359375 0.8773978582584282 -1 0.0090789794921875 15 5 VQY{M(Oxidation (M))|F}ANQQAED 11 -1 52.671 0.0 0.0 1.4726 0.0 0.0 1946.89966883452 333.13181482486567 2280.0314836593857 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 VQY{M(Oxidation (M))|F}ANQQAED 1.4726 - 2560 + 1 1.966 74471.7 0.6499999761581421 5134 4449 9570 SUDHL4_400M_050219_1,9585 SUDHL4_400M_050219_1,9585, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9586 52.902 800.0 89915.0 25 0 20537.0 + 20027 LINKEELLQ 9 105 550.3228902199209 0 550.3231689333916 PEAK CID FTMS 0 0 0 9570 97702.0078125 1.0 0 0.0 16 Unmodified _LINKEELLQ_ REV__ENSG00000133026|ENST00000360416|MYH10;REV__nc|ENSG00000133026|P35580-2|MYH10;REV__nc|ENSG00000133026|P35580-3|MYH10;REV__nc|ENSG00000133026|P35580-5|MYH10;REV__nc|ENSG00000133026|P35580|MYH10 6.723162845929126 0.3444685223463734 5 V 1 -1 6.9897 0.0 0.0 0.63622 0.0 0.0 900.4572295591792 96.08260523013904 996.5398347893182 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.63622 - 28 + 1 1.966 61242.7 0.4099999964237213 5135 4449 9570 SUDHL4_400M_050219_1,9586 SUDHL4_400M_050219_1,9586,LINKEELLQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9588 52.908 77.0 1335500.0 25 0 77559.0 + 31046 RLIDLPGTEL 10 101 563.8269993751044 1125.639445817009 2 563.8281738162041 MULTI CID FTMS 0 0 0 9587 453711.59375 1.0 0 0.0 1 Unmodified _RLIDLPGTEL_ ENSG00000213390|ENST00000358531|ARHGAP19;ENST00000493068.2_1_10:99025521-99052393:-|nuORF;nc|ENSG00000213390|Q14CB8-2|ARHGAP19;nc|ENSG00000213390|Q14CB8-3|ARHGAP19;nc|ENSG00000213390|Q14CB8-5|ARHGAP19;nc|ENSG00000213390|Q14CB8-6|ARHGAP19;nc|ENSG00000213390|Q14CB8-7|ARHGAP19 32.037481411007896 0.2488723560272515 5 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}[PG]TE{I|L} 10 2 + 36.291 0.0 0.0 3.224 3.224 77.077 0.0 0.0 0.0 1.7789357835244175 15.894947575316142 1.7789357835244175 3.5654732351381213 0 0.9604093769761876 0.958607314841775 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{I|L}[PG]TE{I|L};{[QN]|[E{I|L}]|[KN]}[RV]{I|L}[PG]TE{I|L};[VP][RN]P[RK]{M(Oxidation (M))|F}{I|L};[PG][PS]KP[RK]{M(Oxidation (M))|F}{I|L} 3.224;2.9073;1.0691;0.41729 -;-;-;- 480 1 1.976 86689.2 1.0 5136 4450 9587 SUDHL4_400M_050219_1,9588 SUDHL4_400M_050219_1,9588,RLIDLPGTEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9589 52.915 395.0 312420.0 25 0 24085.0 + 20199 LLALEAQTFDQ 11 98 416.8884308834213 1247.643463250464 3 416.8888732790947 MULTI CID FTMS 0 0 0 9587 206976.34375 0.841391620590637 -1 0.1271171569824218 2 Unmodified _LLALEAQTFDQ_ REV__ENSG00000168016|ENST00000645898|TRANK1;REV__nc|ENSG00000168016|O15050|TRANK1 19.143941131932102 0.6369309327873195 5 {I|L}{I|L}A{I|L}DQQQ 8 -1 66.525 0.0 0.0 5.3321 0.0 0.0 0.0 335.1394442193969 335.1394442193969 51.83250196145322 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 1.5189301784845295 {I|L}{I|L}A{I|L}DQQQ 5.3321 - 408 + 1 1.976 114442.0 1.0 5137 4450 9587 SUDHL4_400M_050219_1,9589 SUDHL4_400M_050219_1,9589,LLALEAQTFDQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9590 52.916 64.0 1068600.0 25 0 62541.0 + 31309 RMDYPVFTV 9 84 564.2812143983239 1126.5478758634476 2 564.2820922732353 MULTI CID FTMS 0 0 0 9587 565708.875 0.6532504821789378 -2 0.1361961364746093 3 Unmodified _RMDYPVFTV_ ENSG00000091490|ENST00000399878|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;nc|ENSG00000091490|Q68CR1-3|SEL1L3 24.99096001346401 0.2132109383330889 5 {NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{I|L}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}S{I|L} 10 7 + 39.684 0.0 0.0 3.5226 3.5226 74.111 0.0 0.0 0.0 2.372891665851995 9.277807052660805 2.372891665851995 0.796896906561031 0 0.718765315847925 1.0 0.7302046884880937 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{I|L}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}YPV{M(Oxidation (M))|F}S{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[DC]PV{M(Oxidation (M))|F}S{I|L};[{M(Oxidation (M))|F}T]V[DC]PV{M(Oxidation (M))|F}S{I|L};{[ET]|[MV]}T[{I|L}A]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}S{I|L};{[QN]|[E{I|L}]|[KN]}[YC(Carbamidomethyl (C))]PV{M(Oxidation (M))|F}S{I|L};{[ET]|[MV]}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PV{M(Oxidation (M))|F}S{I|L};[{M(Oxidation (M))|F}T][WM]PV{M(Oxidation (M))|F}S{I|L};{[DS]|[MA]|[CV]|TT}E[{I|L}A]{M(Oxidation (M))|F}V{M(Oxidation (M))|F}S{I|L};{[DS]|[MA]|[CV]|TT}E{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PV{M(Oxidation (M))|F}S{I|L} 3.5226;3.4519;3.312;2.9198;2.4627;2.4243;2.392;2.3399;1.92;1.8493 -;-;-;-;-;-;-;-;-;- 285 1 1.976 61349.6 1.0 5138 4450 9587 SUDHL4_400M_050219_1,9590 SUDHL4_400M_050219_1,9590,RMDYPVFTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9591 52.923 381.0 208350.0 25 0 34469.0 + 29156 QFLLVVLFGFL 11 88 432.5976358942692 1294.7710782830077 3 432.5974914431572 MULTI CID FTMS 0 0 0 9587 287451.5 1.0 0 0.0 4 Unmodified _QFLLVVLFGFL_ REV__ENST00000466324.1_1_11:64444212-64481216:-|nuORF 1.3295316138638542 0.8688751186870782 5 P 1 -1 0.48455 0.0 0.0 0.037424 0.0 0.0 1074.6391488169904 120.051095830725 1194.6902446477154 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.037424 - 3 + 1 1.976 75028.7 1.0 5139 4450 9587 SUDHL4_400M_050219_1,9591 SUDHL4_400M_050219_1,9591,QFLLVVLFGFL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9592 52.935 692.0 138580.0 25 0 12387.0 + 44337 YLPPGFLSA 9 115 482.7606986657654 0 482.7608520388603 PEAK CID FTMS 0 0 0 9587 159196.96875 0.5186360906082973 -4 0.3521728515625 5 Unmodified _YLPPGFLSA_ ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-4|SREBF1 67.03532852164291 0.0144670426088899 5 {I|L}Y{I|L}P 4 7 23.928 0.0 0.0 2.4834 0.0 0.0 176.07692604071207 298.1204928033813 474.19741884409336 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}Y{I|L}P 2.4834 - 137 + 1 1.976 78113.1 1.0 5140 4450 9587 SUDHL4_400M_050219_1,9592 SUDHL4_400M_050219_1,9592,YLPPGFLSA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9593 52.943 437.0 198460.0 25 0 18856.0 + -1 LLLRVCDFQA 10 105 412.225514956407 1233.654715469421 3 412.2251159548759 MULTI CID FTMS 0 0 0 9587 162555.953125 1.0 0 0.0 6 Carbamidomethyl (C) _LLLRVC(Carbamidomethyl (C))DFQA_ REV__ENSG00000161664|ENST00000293414|ASB16 6.630372943996041 0.695967137280542 5 {I|L}{I|L}DM{M(Oxidation (M))|F}V{I|L}{I|L}[RD] 10 -1 + 44.887 0.0 0.0 3.6385 3.6385 84.671 0.0 0.0 0.0 24.88438100576431 24.11191354306005 24.11191354306005 11.453650195120844 0 0.0 2.0 0.3494850021680094 0.0 {I|L}{I|L}DM{M(Oxidation (M))|F}V{I|L}{I|L}[RD];{I|L}{I|L}DM{M(Oxidation (M))|F}{I|L}{I|L}V[RD];{I|L}{I|L}[WH][QP]AV[RD];{I|L}{I|L}D{I|L}[YN]AA[WR];{I|L}{I|L}[WH][QP]G{I|L}[RD];[QP]WHAV{I|L}{I|L}[RD];[PG]AWHAV{I|L}{I|L}[RD];[QA]P[WH]V{I|L}{I|L}[RD];[QP]WHG{I|L}{I|L}{I|L}[RD];[QP]WH{I|L}{I|L}AV[RD] 3.6385;2.7101;1.8752;1.5913;1.4885;1.3645;1.2667;1.0419;1.0419;0.96334 -;-;-;-;-;-;-;-;-;- 684 1 1.976 76965.0 1.0 5141 4450 9587 SUDHL4_400M_050219_1,9593 SUDHL4_400M_050219_1,9593,LLLRVCDFQA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9594 52.952 489.0 250830.0 25 0 18229.0 + 16501 KALQFLEEV 9 139 538.803445845418 1075.5923387576358 2 538.8024169802666 MULTI CID FTMS 0 0 0 9587 146818.234375 0.5907382821051138 -1 0.1271171569824218 7 Unmodified _KALQFLEEV_ ENSG00000146731|ENST00000275603|CCT6A;nc|ENSG00000146731|P40227-2|CCT6A 103.41943736471065 0.0091853052135676 5 [Q{I|L}]AK{M(Oxidation (M))|F}{I|L}EEV 9 4 + 96.38 0.0 0.0 8.9606 8.9606 91.411 0.0 0.0 0.0 5.311978319982927 16.478174818886373 5.311978319982927 5.311978319982927 0 1.7614393726401687 0.6575773191777937 0.7742275032520141 2.159379381312206 [Q{I|L}]AK{M(Oxidation (M))|F}{I|L}EEV;[{I|L}A]GAK{M(Oxidation (M))|F}{I|L}EEV;[Q{I|L}]A{M(Oxidation (M))|F}K{I|L}EEV;[{I|L}A]QK{M(Oxidation (M))|F}{I|L}EEV;[Q{I|L}]{M(Oxidation (M))|F}AK{I|L}EEV;[{I|L}A]GA{M(Oxidation (M))|F}K{I|L}EEV;[{I|L}A]KQ{M(Oxidation (M))|F}{I|L}EEV;[Q{I|L}]AK{M(Oxidation (M))|F}E{I|L}EV;[KA]{I|L}Q{M(Oxidation (M))|F}{I|L}EEV;[{I|L}A]G{M(Oxidation (M))|F}AK{I|L}EEV 8.9606;8.4667;8.3268;8.1553;8.0244;7.8329;7.6892;7.6834;7.5349;7.5305 -;-;-;-;-;-;-;-;+;- + 2379 1 1.976 101135.1 1.0 5142 4450 9587 SUDHL4_400M_050219_1,9594 SUDHL4_400M_050219_1,9594,KALQFLEEV True True KALQFLEEV 52.951726 538.8048 1321689.625 9587.0 nc|ENSG00000146731|P40227-2|CCT6A;;ENSG00000146731|ENST00000275603|CCT6A 4.2795811494191485 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9595 52.956 247.0 258090.0 25 0 68852.0 20700 LLRQTVPWLLG 11 74 648.3929777673518 0 648.3925659060478 PEAK CID FTMS 0 0 0 9587 361886.8125 1.0 0 0.0 8 Unmodified _LLRQTVPWLLG_ ENST00000510805.1_1_4:144480662-144481064:+|nuORF 2.9952420565917617 0.4761840153648598 5 QVW 3 8 8.4164 0.0 0.0 0.65003 0.0 0.0 727.4666673493535 151.06922327213127 878.5358906214848 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QVW 0.65003 - 19 + 1 1.976 71438.3 1.0 5143 4450 9587 SUDHL4_400M_050219_1,9595 SUDHL4_400M_050219_1,9595,LLRQTVPWLLG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9596 52.963 372.0 296410.0 25 0 17430.0 + 34444 SLYEDDITF 9 115 1102.4937009441935 1101.4864244775938 1 1102.495288074017 MULTI CID FTMS 0 0 0 9587 259616.09375 1.0 0 0.0 9 Unmodified _SLYEDDITF_ ENSG00000147804|ENST00000301305|SLC39A4;ENST00000529462.5_1_8:145637924-145638077:-|nuORF;nc|ENSG00000147804|Q6P5W5-2|SLC39A4 88.90359156742426 0.0153595091083554 5 {[TV]|[{I|L}S]}YEDD{I|L}T{M(Oxidation (M))|F} 9 0 + 98.254 0.0 0.0 8.9202 8.9202 92.177 0.0 0.0 0.0 13.84668253115892 14.973024840566469 13.84668253115892 6.518637558036673 0 0.75 1.6989700043360187 2.392159058960253 0.0 + + {[TV]|[{I|L}S]}YEDD{I|L}T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}YEDEVT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}YEDDT{I|L}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}EDYD{I|L}T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}EYDD{I|L}T{M(Oxidation (M))|F};[YE]DD{I|L}S{I|L}T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}YEDES{I|L}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}EDYEVT{M(Oxidation (M))|F};[YE]D{I|L}SD{I|L}T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}EYDEVT{M(Oxidation (M))|F} 8.9202;8.3284;7.8913;7.8769;7.6667;7.6631;7.2995;7.2851;7.0761;7.0748 +;-;-;-;-;-;-;-;-;- + 2975 1 1.976 76654.4 1.0 5144 4450 9587 SUDHL4_400M_050219_1,9596 SUDHL4_400M_050219_1,9596,SLYEDDITF True True SLYEDDITF 52.963083 1102.49528807402 1514893.0 9587.0 ENST00000529462.5_1_8:145637924-145638077:-|nuORF;;ENSG00000147804|ENST00000301305|SLC39A4;;nc|ENSG00000147804|Q6P5W5-2|SLC39A4 7.634269873301188 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9597 52.969 278.0 131590.0 25 0 26350.0 + 28547 PTQLLRTKLFL 11 59 665.4192633018442 1328.8239736704884 2 665.4196044802666 MULTI CID FTMS 0 0 0 9587 221832.25 0.8115405470631605 -4 0.3521728515625 10 Unmodified _PTQLLRTKLFL_ REV__ENST00000424834.6_1_13:24798679-24823837:+|nuORF 2.498486711656943 0.8633599123570009 5 {I|L}VAH 4 -1 12.907 0.0 0.0 0.97133 0.0 0.0 776.4938477933384 129.05629907779533 905.5501468711336 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VAH 0.97133 - 46 + 1 1.976 36537.3 1.0 5145 4450 9587 SUDHL4_400M_050219_1,9597 SUDHL4_400M_050219_1,9597,PTQLLRTKLFL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9598 52.974 248.0 298890.0 25 0 22848.0 + 34003 SLIRNLEQL 9 92 543.3190928119802 1084.6236326907604 2 543.3197509646416 MULTI CID FTMS 0 0 0 9587 155179.78125 0.996033619311096 -1 0.1271171569824218 11 Unmodified _SLIRNLEQL_ ENSG00000076944|ENST00000221283|STXBP2;ENST00000593854.5_1_19:7709481-7711320:+|nuORF;ENST00000601061.1_1_19:7710099-7712134:+|nuORF;nc|ENSG00000076944|Q15833-2|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2 59.36838082759317 0.0264317782606298 5 {[TV]|[{I|L}S]}{I|L}RN{I|L}EQ{I|L} 9 0 + 62.062 0.0 0.0 5.7219 5.7219 87.188 0.0 0.0 0.0 20.737862141609185 46.57698754585809 20.737862141609185 7.95880017344075 0 1.1237125054200234 2.0 0.0 0.2742275032520141 + + {[TV]|[{I|L}S]}{I|L}RN{I|L}EQ{I|L};{[TV]|[{I|L}S]}{I|L}RD[Q{I|L}]Q{I|L};{[TV]|[{I|L}S]}{I|L}RGG{I|L}EQ{I|L};{[TV]|[{I|L}S]}{I|L}RN{I|L}E[AG]{I|L};{[TV]|[{I|L}S]}{I|L}RN{[{M(Oxidation (M))|F}H]|[RQ]}[KA];{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}N{I|L}EQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}D[Q{I|L}]Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}GG{I|L}EQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}N{I|L}E[AG]{I|L} 5.7219;4.9882;4.873;4.873;2.6571;2.5848;1.851;1.7358;1.7358 +;-;-;-;-;-;-;-;- + 245 1 1.976 64198.8 1.0 5146 4450 9587 SUDHL4_400M_050219_1,9598 SUDHL4_400M_050219_1,9598,SLIRNLEQL True True SLIRNLEQL 52.97401 543.319750964642 1054261.75 9587.0 ENST00000593854.5_1_19:7709481-7711320:+|nuORF;;nc|ENSG00000076944|Q15833-2|STXBP2;;ENSG00000076944|ENST00000221283|STXBP2;;nc|ENSG00000076944|Q15833-3|STXBP2;;ENST00000601061.1_1_19:7710099-7712134:+|nuORF 6.007137298583984 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9599 52.984 559.0 331110.0 25 0 21315.0 + 15732 IRLDVDQEEF 10 136 632.3125909549274 1262.6106289766549 2 632.8121826052666 MULTI CID FTMS 0 0 0 9587 137995.375 0.8974988798671917 -1 0.1271171569824218 12 Unmodified _IRLDVDQEEF_ REV__ENSG00000168096|ENST00000304283|ANKS3;REV__ENST00000590803.5_1_16:4747031-4751860:-|nuORF;REV__ENST00000591185.5_1_16:4748919-4749165:-|nuORF;REV__nc|ENSG00000168096|Q6ZW76-2|ANKS3 15.248480904072842 0.5916873121453583 5 {I|L}{I|L}[C(Carbamidomethyl (C))N][C(Carbamidomethyl (C))S]D{I|L}{I|L}R 10 -1 + 37.584 0.0 0.0 2.9767 2.9767 84.644 0.0 0.0 0.0 11.679987112256214 10.90166223149673 10.90166223149673 20.0 0 0.0 2.0 0.3252574989159953 0.5 {I|L}{I|L}[C(Carbamidomethyl (C))N][C(Carbamidomethyl (C))S]D{I|L}{I|L}R;[QA][YC(Carbamidomethyl (C))][QP]D{I|L}{I|L}R;{[VA]|[{I|L}G]}Q{[DS]|[MA]|[CV]|TT}[C(Carbamidomethyl (C))S]D{I|L}{I|L}R;[QA]V{[DS]|[MA]|[CV]|TT}[C(Carbamidomethyl (C))S]D{I|L}{I|L}R;[DV]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}V[C(Carbamidomethyl (C))H]A{I|L}R;[TP]A[KC][C(Carbamidomethyl (C))S]D{I|L}{I|L}R;[Q{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[C(Carbamidomethyl (C))S]D{I|L}{I|L}R;{[VA]|[{I|L}G]}A{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[C(Carbamidomethyl (C))S]D{I|L}{I|L}R;[{I|L}V][C(Carbamidomethyl (C))Q][C(Carbamidomethyl (C))S]D{I|L}{I|L}R;[Q{I|L}]G{[DS]|[MA]|[CV]|TT}[C(Carbamidomethyl (C))S]D{I|L}{I|L}R 2.9767;1.3927;1.1577;1.1577;1.117;0.85659;0.85457;0.79949;0.77637;0.75908 -;-;-;-;-;-;-;-;-;- 765 1 1.976 142148.3 1.0 5147 4450 9587 SUDHL4_400M_050219_1,9599 SUDHL4_400M_050219_1,9599,IRLDVDQEEF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9600 52.998 800.0 631750.0 25 0 29683.0 + 25911 NLLALSSPPPL 11 180 561.3314884966132 1120.6484240600264 2 561.3312255740166 MULTI CID FTMS 0 0 0 9587 105506.7265625 1.0 0 0.0 13 Unmodified _NLLALSSPPPL_ REV__ENSG00000156030|ENST00000423556|MIDEAS;REV__nc|ENSG00000156030|Q6PJG2|MIDEAS 27.628801355627647 0.4434699450731472 5 [TP]AAVQRVA 9 -1 71.432 0.0 0.0 6.3742 0.0 0.0 0.0 224.1010500026392 224.1010500026392 21.79228741894471 0.0 0.0 0.0 0 1.1307196863200843 1.6989700043360187 2.4534021960761265 0.2614393726401688 [TP]AAVQRVA 6.3742 - 15441 1 1.976 388056.6 0.4600000083446502 5148 4450 9587 SUDHL4_400M_050219_1,9600 SUDHL4_400M_050219_1,9600,NLLALSSPPPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9602 53.002 1.9 46944000.0 25 0 3173500.0 28514 PTLQEVILANL 11 105 605.8557385267492 1209.6969241202985 2 605.8567993044853 MULTI CID FTMS 0 0 0 9601 33082922.0 0.682445342977709 1 -0.0418891906738281 1 Unmodified _PTLQEVILANL_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 40.23920728925047 0.2087110615831976 5 [TP]AAVQRVA 9 8 57.756 0.0 0.0 4.7744 0.0 0.0 0.0 313.1503730417317 313.1503730417317 23.141959507886423 0.0 0.0 0.0 0 0.3054621874040891 1.0969100130080565 2.2973074971914094 0.25 [TP]AAVQRVA 4.7744 - 1947 1 1.976 69196.6 1.0 5149 4451 9601 SUDHL4_400M_050219_1,9602 SUDHL4_400M_050219_1,9602,PTLQEVILANL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9603 53.005 136.0 254280.0 25 0 20905.0 -1 LSHIWVMMTQV 11 62 680.8411630793622 1359.6677732255243 2 680.8409301638603 MULTI CID FTMS 0 0 0 9601 358512.53125 0.2943431794253509 2 -0.1043853759765625 2 Oxidation (M) _LSHIWVM(Oxidation (M))MTQV_ ENST00000220531.7_1_15:45898739-45898772:+|nuORF 13.042465956692816 0.7638483625850725 5 QTV 3 -1 27.396 0.0 0.0 2.0149 0.0 0.0 1013.4826363620464 0.0 1013.4826363620464 0.0 3.214562785677657 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.2614393726401688 QTV 2.0149 - 311 + 1 1.976 31185.4 1.0 5150 4451 9601 SUDHL4_400M_050219_1,9603 SUDHL4_400M_050219_1,9603,LSHIWVMMTQV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9604 53.008 114.0 568430.0 25 0 94745.0 + 37897 TLWPEVQKL 9 79 557.3187460072519 1112.6229390813037 2 557.3192016482353 MULTI CID FTMS 0 0 0 9601 595878.875 0.7644064094908288 1 -0.0418891906738281 3 Unmodified _TLWPEVQKL_ ENSG00000134759|ENST00000358232|ELP2;ENST00000541294.1_1_18:33739943-33744659:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 45.69961567697781 0.0497987121815769 5 [{I|L}T]WPEVQ[K{I|L}] 9 0 + 66.437 0.0 0.0 5.9712 5.9712 89.907 0.0 0.0 0.0 42.23628654999466 5.642492736872597 5.642492736872597 9.208187539523747 0 0.7302046884880937 1.6989700043360187 0.3807196863200844 0.8494850021680094 + + [{I|L}T]WPEVQ[K{I|L}];[{I|L}T]WPEV[AG][K{I|L}];[{I|L}T]WRRW[VP];[{I|L}T][VG][NP]W{I|L}[{I|L}T];[EP]VQKW{I|L}[{I|L}T];[KQ]{I|L}[{M(Oxidation (M))|F}V]P[VS][VP];[KQ]{I|L}[{M(Oxidation (M))|F}V]P{[DA]|[EG]}[VP];[EP]V[AG]KW{I|L}[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}[EP]KW{I|L}[{I|L}T];[KQ]{I|L}[DP]W{I|L}[{I|L}T] 5.9712;5.1436;3.0485;2.5286;2.4369;1.7335;1.7335;1.6092;1.0633;1.0226 +;-;-;-;-;-;-;-;-;- + 231 + 1 1.976 52944.2 1.0 5151 4451 9601 SUDHL4_400M_050219_1,9604 SUDHL4_400M_050219_1,9604,TLWPEVQKL True True TLWPEVQKL 53.007539 557.319201648235 31908789.0 9601.0 nc|ENSG00000134759|Q6IA86-7|ELP2;;nc|ENSG00000134759|Q6IA86-3|ELP2;;nc|ENSG00000134759|Q6IA86-4|ELP2;;nc|ENSG00000134759|Q6IA86-5|ELP2;;ENSG00000134759|ENST00000358232|ELP2;;ENST00000541294.1_1_18:33739943-33744659:+|nuORF;;nc|ENSG00000134759|Q6IA86-6|ELP2;;nc|ENSG00000134759|Q6IA86-2|ELP2 8.301237265268961 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9605 53.011 176.0 2491600.0 25 0 454970.0 20792 LLVSMPCGSSL 11 100 553.7810239063598 1105.5474948795195 2 553.7810546755791 MULTI CID FTMS 0 0 0 9601 266749.71875 0.2589168528417095 2 -0.1043853759765625 4 Unmodified _LLVSMPCGSSL_ ENST00000524482.5_1_11:64893360-64893489:+|nuORF;ENST00000526319.5_1_11:64893360-64893549:+|nuORF 30.63653989081413 0.3728473165938781 5 {I|L}{I|L}DV[C(Carbamidomethyl (C))C]A{I|L}S{I|L} 10 6 + 55.067 0.0 0.0 4.9809 4.9809 80.918 0.0 0.0 0.0 3.2403126772771884 10.452490459521968 3.2403126772771884 3.0102999566398125 0 0.5796896906561032 1.6989700043360187 0.2614393726401688 0.0 {I|L}{I|L}DV[C(Carbamidomethyl (C))C]A{I|L}S{I|L};{I|L}{I|L}VD[C(Carbamidomethyl (C))C]A{I|L}S{I|L};[{I|L}V]D{I|L}[C(Carbamidomethyl (C))C]A{I|L}S{I|L};[DV]{I|L}{I|L}[C(Carbamidomethyl (C))C]A{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}V{I|L}[C(Carbamidomethyl (C))C]A{I|L}S{I|L};[{I|L}V]EV[C(Carbamidomethyl (C))C]A{I|L}S{I|L};{I|L}{I|L}D{I|L}C(Carbamidomethyl (C))C(Carbamidomethyl (C)){I|L}S{I|L};[{I|L}V]{I|L}D[C(Carbamidomethyl (C))C]A{I|L}S{I|L};{I|L}{I|L}VEC(Carbamidomethyl (C))C(Carbamidomethyl (C)){I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}V[C(Carbamidomethyl (C))C]A{I|L}S{I|L} 4.9809;4.7087;4.6879;4.4427;4.36;4.1894;3.9303;3.9171;3.658;3.6448 -;-;-;-;-;-;-;-;-;- 354 1 1.976 332123.9 1.0 5152 4451 9601 SUDHL4_400M_050219_1,9605 SUDHL4_400M_050219_1,9605,LLVSMPCGSSL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9606 53.019 450.0 239920.0 25 0 25732.0 + 42506 SLFPGKLEV 9 106 495.2869964050322 988.5594398768644 2 495.2875854372978 MULTI CID FTMS 0 0 0 9601 161672.140625 0.1190790411932936 5 -0.3836135864257812 5 Unmodified _VTLATGVLCL_ nc|ENSG00000177731|Q13045-3|FLII;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENSG00000177731|ENST00000327031|FLII;nc|ENSG00000177731|Q13045-2|FLII 25.399314129420983 0.3980215340001851 5 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{I|L}PN 8 6 57.138 0.0 0.0 5.7799 0.0 0.0 0.0 68.05150781802968 68.05150781802968 44.038727145734015 0.0 0.0 0.0 0 1.079689690656103 2.0 0.0 0.1382104921644452 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{I|L}PN 5.7799 - 572 + 1 1.976 82612.5 1.0 5153 4451 9601 SUDHL4_400M_050219_1,9606 SUDHL4_400M_050219_1,9606,VTLATGVLCL False False SLFPGKLEV 53.018962 495.287585437298 19676712.0 9601.0 nc|ENSG00000177731|Q13045-3|FLII;;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;nc|ENSG00000177731|Q13045-2|FLII 3.458098570505778 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9607 53.028 520.0 294220.0 25 0 29083.0 + 9199 FGGVLILIHR 10 117 375.56933832341485 1123.6861855704446 3 375.5694457888603 MULTI CID FTMS 0 0 0 9601 123554.3984375 0.0137325754700697 -5 0.4475593566894531 6 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 54.773552608820026 0.052133998764723 5 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 99.14 0.0 0.0 8.8227 8.8227 94.923 0.0 0.0 0.0 89.60674171823011 25.646876690452046 25.646876690452046 9.208187539523747 0 1.0044321917401078 2.0 0.0 1.448104871308642 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 8.8227;8.0033 -;- 168 + 1 1.976 124252.5 1.0 5154 4451 9601 SUDHL4_400M_050219_1,9607 SUDHL4_400M_050219_1,9607,FGGVLILIHR True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9608 53.04 666.0 327800.0 25 0 45865.0 + 33890 SLFPHNPQFI 10 141 600.3147871509307 1198.6150213686612 2 600.3154785037041 MULTI CID FTMS 0 0 0 9601 121373.3125 0.4585613135343231 -3 0.2315826416015625 7 Unmodified _SLFPHNPQFI_ ENSG00000117133|ENST00000370654|RPF1;WARS2-RPF1|1|fusion 96.0343551737317 0.0089011713774135 5 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}RNCS{I|L}{M(Oxidation (M))|F}{I|L} 10 5 + 95.218 0.0 0.0 7.944 7.944 85.045 0.0 0.0 0.0 22.29696243879616 68.61431451613711 22.29696243879616 0.5799194697768684 0 2.5356668758921828 2.0 0.0 1.2728787452803376 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}RNCS{I|L}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RNC{I|L}S{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RGGCS{I|L}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RGGC{I|L}S{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RNHPDT{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RNC{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}R{M(Oxidation (M))|F}AAQ{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RGGHPDT{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}R{[CA]|SS}RS{M(Oxidation (M))|F}{I|L};[HN]P{M(Oxidation (M))|F}QPS{I|L}{M(Oxidation (M))|F}{I|L} 7.944;7.8956;7.1794;7.131;6.6356;6.3499;5.9147;5.871;5.7444;5.6837 -;-;-;-;-;-;-;-;-;- 5108 1 1.976 158659.7 1.0 5155 4451 9601 SUDHL4_400M_050219_1,9608 SUDHL4_400M_050219_1,9608,SLFPHNPQFI True True SLFPHNPQFI 53.039701 600.315478503704 2390754.0 9601.0 ENSG00000117133|ENST00000370654|RPF1;;WARS2-RPF1|1|fusion 6.6687337557474775 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9610 53.056 800.0 180370.0 25 0 13589.0 + 11627 GLAKLIADV 9 160 450.28225289035487 898.5499528475098 2 450.2829467654228 MULTI CID FTMS 0 0 0 9609 111318.8671875 1.0 0 0.0 1 Unmodified _GLAKLIADV_ ENSG00000168496|ENST00000305885|FEN1;ENST00000401028.2_1_1:91793937-91794252:+|nuORF 51.629811660486645 0.0367964933207742 5 {[VA]|[{I|L}G]}AK{I|L}{I|L}ADV 9 0 + 83.171 0.0 0.0 9.2561 9.2561 89.344 0.0 0.0 0.0 21.93066527840834 59.34833115752497 21.93066527840834 3.0546218740408904 0 2.110924374808178 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}AK{I|L}{I|L}ADV;{[VA]|[{I|L}G]}AK{I|L}A{I|L}DV;{[VA]|[{I|L}G]}A{I|L}K{I|L}ADV;{[VA]|[{I|L}G]}A{I|L}KA{I|L}DV;{[VA]|[{I|L}G]}AK{I|L}{I|L}WV;{[VA]|[{I|L}G]}A{I|L}K{I|L}WV;{[VA]|[{I|L}G]}AK{I|L}E{[VA]|[{I|L}G]}V;[KA]{I|L}G{I|L}{I|L}ADV;{[VA]|[{I|L}G]}A{I|L}KE{[VA]|[{I|L}G]}V;[Q{I|L}]K{I|L}{I|L}ADV 9.2561;8.9162;8.4782;8.1383;7.9787;7.2008;6.943;6.3342;6.1651;6.0879 +;-;-;-;-;-;-;-;-;- + 1455 1 1.976 110412.5 0.3600000143051147 5156 4452 9609 SUDHL4_400M_050219_1,9610 SUDHL4_400M_050219_1,9610,GLAKLIADV True True GLAKLIADV 53.05582 450.282946765423 469433.9375 9609.0 ENSG00000168496|ENST00000305885|FEN1;;ENST00000401028.2_1_1:91793937-91794252:+|nuORF 5.829197247823079 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9611 53.07 800.0 374370.0 25 0 28805.0 + 1721 ALPPVLTTV 9 141 455.7838262553348 909.5530995774697 2 455.7839233279228 MULTI CID FTMS 0 0 0 9609 215264.46875 0.4201722944397338 -2 0.1372756958007812 2 Unmodified _ALPPVLTTV_ ENSG00000155506|ENST00000518297|LARP1 53.57557251787612 0.0325303259649373 5 [VP]P{I|L}TTVA{I|L} 9 5 + 41.233 0.0 0.0 4.5333 4.5333 81.424 0.0 0.0 0.0 6.911225100727584 3.859466628246025 3.859466628246025 4.771212547196619 0 0.0206673934733615 0.9208187539523752 1.424742501084005 0.0 [VP]P{I|L}TTVA{I|L};[VP]{I|L}PTTVA{I|L};[VP]PT{I|L}TVA{I|L};{I|L}{I|L}D{I|L}[PG]VA{I|L};{I|L}{I|L}{I|L}D[PG]VA{I|L};{[HG]|PP}V{I|L}TTVA{I|L};[{I|L}A]PVVEVA{I|L};{[HG]|PP}VT{I|L}TVA{I|L};[{I|L}V]PPTTVA{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}[PG]VA{I|L} 4.5333;4.0087;3.8916;3.7735;3.336;3.2462;2.8351;2.6045;2.3907;2.1775 -;-;-;-;-;-;-;-;-;- 1207 1 1.976 230346.3 0.6600000262260437 5157 4452 9609 SUDHL4_400M_050219_1,9611 SUDHL4_400M_050219_1,9611,ALPPVLTTV True True ALPPVLTTV 53.069632 455.783923327923 2461178.5 9609.0 ENSG00000155506|ENST00000518297|LARP1 2.629460255304972 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9612 53.077 412.0 307380.0 25 0 33117.0 + 14609 IIFTGPSITSL 11 114 574.8322740066849 1147.6499950801697 2 574.8335449099541 MULTI CID FTMS 0 0 0 9609 130806.1875 0.6967363003814091 -2 0.1372756958007812 3 Unmodified _IIFTGPSITSL_ ENSG00000177614|ENST00000391860|PGBD5;nc|ENSG00000177614|Q8N414-2|PGBD5 49.93300154707207 0.1180010809391383 5 {I|L}{I|L}{M(Oxidation (M))|F}VT{M(Oxidation (M))|F}{I|L}ND 9 7 84.651 0.0 0.0 7.3761 0.0 0.0 0.0 82.06701074771718 82.06701074771718 37.663800089887545 0.0 0.0 0.0 0 0.8494850021680094 2.0 1.960409376976188 0.0 {I|L}{I|L}{M(Oxidation (M))|F}VT{M(Oxidation (M))|F}{I|L}ND 7.3761 - 6131 + 1 1.976 97664.3 1.0 5158 4452 9609 SUDHL4_400M_050219_1,9612 SUDHL4_400M_050219_1,9612,IIFTGPSITSL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9613 53.082 244.0 245740.0 25 0 16983.0 -1 0 70 966.9641569106157 1931.9137608880312 2 967.462451159954 MULTI CID FTMS 0 0 0 9609 166778.0625 0.1055733173918599 5 -0.5152244567871094 4 5 DAD{I|L}[NP][EP] 8 -1 29.654 0.0 0.0 1.5349 0.0 0.0 1062.5453158307862 0.0 1062.5453158307862 0.0 13.878493940035453 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 DAD{I|L}[NP][EP] 1.5349 - 332 1 1.976 48240.5 1.0 5159 4452 9609 SUDHL4_400M_050219_1,9613 SUDHL4_400M_050219_1,9613, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9614 53.095 800.0 166120.0 25 0 3253.5 -1 0 107 1159.2858956900398 4633.114476893759 4 1160.034594714642 MULTI CID FTMS 0 0 0 9609 103585.9453125 1.0 0 0.0 5 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.15086 0.0 0.0 3393.586077257666 1089.4382598136108 4483.024337071277 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.15086 - 17 + 1 1.976 79482.4 0.5799999833106995 5160 4452 9609 SUDHL4_400M_050219_1,9614 SUDHL4_400M_050219_1,9614, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9615 53.102 361.0 131400.0 25 0 2396.8 -1 0 64 1178.2953510579557 0 1178.022753894329 PEAK CID FTMS 0 0 0 -1 0 6 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.976 32839.1 1.0 5161 4452 9609 SUDHL4_400M_050219_1,9615 SUDHL4_400M_050219_1,9615, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9617 53.109 176.0 602190.0 25 0 67701.0 + -1 LIKKCLVCQA 10 85 616.8461122797174 1231.6776716262348 2 616.8461791872978 MULTI CID FTMS 0 0 0 9616 256182.734375 0.2126957794954963 3 -0.2792282104492187 1 2 Carbamidomethyl (C) _LIKKC(Carbamidomethyl (C))LVC(Carbamidomethyl (C))QA_ REV__ENSG00000236287|ENST00000413761|ZBED5 37.97399986684836 0.1789611706409123 5 {I|L}{I|L}{I|L}DV 5 -1 74.266 0.0 0.0 6.0297 0.0 0.0 0.0 675.3095207798353 675.3095207798353 53.32387206599456 0.0 0.0 0.0 0 1.6307196863200843 2.0 0.0 0.0 {I|L}{I|L}{I|L}DV 6.0297 - 387 + 1 1.989 82154.0 1.0 5162 4453 9616 SUDHL4_400M_050219_1,9617 SUDHL4_400M_050219_1,9617,LIKKCLVCQA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9618 53.117 448.0 174520.0 25 0 46624.0 14959 ILNFLRHGKLV 11 97 655.4079095263819 1308.8012661195637 2 655.4085571169853 MULTI CID FTMS 0 0 0 9616 151880.984375 0.2622299556028726 3 -0.2792282104492187 2 Unmodified _ILNFLRHGKLV_ ENSG00000100379|ENST00000403888|KCTD17;nc|ENSG00000100379|Q8N5Z5-2|KCTD17 9.38312468134398 0.8308777417566128 5 [VP][SG]VQRAVV 10 10 43.025 0.0 0.0 3.2874 0.0 0.0 0.0 313.18539632880123 313.18539632880123 7.742275032520141 0.0 0.0 0.0 0 0.0 0.0 1.0629529932484498 0.0 [VP][SG]VQRAVV 3.2874 - 1254 1 1.989 62487.7 1.0 5163 4453 9616 SUDHL4_400M_050219_1,9618 SUDHL4_400M_050219_1,9618,ILNFLRHGKLV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9619 53.131 800.0 219930.0 25 0 17437.0 + 31013 RLFDEPQLASL 11 141 644.8486444103173 1287.6827358874343 2 644.8484985232353 MULTI CID FTMS 0 0 0 9616 99232.96875 0.5648178838941734 -2 0.1043853759765625 3 Unmodified _RLFDEPQLASL_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1 60.899326713953855 0.0654953153043458 5 [{I|L}T]GE{I|L}{M(Oxidation (M))|F}PQ{I|L}AS{I|L} 12 5 + 95.955 0.0 0.0 7.4518 7.4518 86.8 0.0 0.0 0.0 2.635395081467763 14.226208160867884 2.635395081467763 2.635395081467763 0 1.7134679910804405 1.6989700043360187 0.6861818737241735 0.6989700043360187 [{I|L}T]GE{I|L}{M(Oxidation (M))|F}PQ{I|L}AS{I|L};{[TV]|[{I|L}S]}AE{I|L}{M(Oxidation (M))|F}PQ{I|L}AS{I|L};{[SA]|[TG]}{I|L}E{I|L}{M(Oxidation (M))|F}PQ{I|L}AS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}REPQ{I|L}AS{I|L};[{I|L}A]SE{I|L}{M(Oxidation (M))|F}PQ{I|L}AS{I|L};[{I|L}T]GE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}AS{I|L};[{I|L}T]GE{I|L}{M(Oxidation (M))|F}P[AG]{I|L}AS{I|L};[{I|L}A]ES{I|L}{M(Oxidation (M))|F}PQ{I|L}AS{I|L};{[TV]|[{I|L}S]}AE{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}AS{I|L};{[TV]|[{I|L}S]}AE{I|L}{M(Oxidation (M))|F}P[AG]{I|L}AS{I|L} 7.4518;7.2471;6.9383;6.5356;6.3823;6.2472;6.2024;6.0732;6.0425;5.9977 -;-;-;-;-;-;-;-;-;- 4740 1 1.989 136148.5 0.949999988079071 5164 4453 9616 SUDHL4_400M_050219_1,9619 SUDHL4_400M_050219_1,9619,RLFDEPQLASL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9620 53.145 800.0 296210.0 25 0 27414.0 + 1471 ALFQRPPLI 9 162 527.8244783154873 1053.6344036977746 2 527.8242675662041 MULTI CID FTMS 0 0 0 9616 159203.296875 1.0 0 0.0 4 Unmodified _ALFQRPPLI_ ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1 85.35673624503755 0.0162188719545379 5 [{I|L}A]{M(Oxidation (M))|F}QRPP{I|L}{I|L} 9 0 [{I|L}A] + + 60.196 23.724 12.885 5.7132 5.7132 61.369 0.0 0.0 0.0 0.0 36.8619178458356 0.0 0.0 0 2.329689690656103 0.0 0.0 0.5866968715561641 + + [{I|L}A]{M(Oxidation (M))|F}QRPP{I|L}{I|L} 5.7132 + + 1901 + 1 1.989 181440.0 0.5400000214576721 5165 4453 9616 SUDHL4_400M_050219_1,9620 SUDHL4_400M_050219_1,9620,ALFQRPPLI True True ALFQRPPLI 53.144886 527.824267566204 1305529.875 9616.0 nc|ENSG00000130826|O60832-2|DKC1;;ENSG00000130826|ENST00000369550|DKC1 4.648989677429199 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9622 53.161 800.0 993840.0 25 0 153400.0 -1 0 155 554.3541912328791 553.346914766279 1 554.3561889529228 MULTI CID FTMS 0 0 0 9621 123340.90625 0.3145884658385474 4 -0.4806442260742187 1 5 {I|L}{I|L}D 3 -1 55.049 0.0 0.0 9.9484 0.0 0.0 0.0 209.13006006412343 209.13006006412343 11.958865705675876 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.5 0.0 {I|L}{I|L}D 9.9484 - 150 + 1 1.989 582363.9 0.4000000059604645 5166 4454 9621 SUDHL4_400M_050219_1,9622 SUDHL4_400M_050219_1,9622, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9623 53.175 800.0 96526.0 25 0 8802.2 + 20474 LLLAQLSDA 9 123 472.276102275277 942.537651617354 2 472.2758666872978 MULTI CID FTMS 0 0 0 9621 314498.6875 0.9946869421294178 -1 0.0428962707519531 2 Unmodified _LLLAQLSDA_ ENSG00000175348|ENST00000534025|TMEM9B 46.92087301778293 0.0471210510596396 5 {I|L}{I|L}{I|L}AQ 5 4 25.15 0.0 0.0 2.6684 0.0 0.0 0.0 401.1651289945604 401.1651289945604 0.4833247972062793 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 + {I|L}{I|L}{I|L}AQ 2.6684 + + 211 1 1.989 61339.6 0.8500000238418579 5167 4454 9621 SUDHL4_400M_050219_1,9623 SUDHL4_400M_050219_1,9623,LLLAQLSDA True True LLLAQLSDA 53.175057 472.275866687298 1793579.75 9621.0 ENSG00000175348|ENST00000534025|TMEM9B 3.3791935443878174 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9624 53.187 689.0 341750.0 25 0 24095.0 + -1 LLLDAMPFDVV 11 145 624.83015096151 1247.6457489898198 2 624.8312255740166 MULTI CID FTMS 0 0 0 9621 132332.203125 0.2878865988142252 3 -0.4098320007324219 3 Oxidation (M) _LLLDAM(Oxidation (M))PFDVV_ REV__ENSG00000142082|ENST00000382743|SIRT3;REV__nc|ENSG00000142082|Q9NTG7-2|SIRT3 26.268140514670165 0.4754186812857754 5 {I|L}{I|L}[C(Carbamidomethyl (C))N][C(Carbamidomethyl (C))S]{I|L}KQ{I|L} 10 -1 + 40.47 0.0 0.0 3.2437 3.2437 80.368 0.0 0.0 0.0 1.4549881111548544 3.532124896954436 1.4549881111548544 7.938673042860799 0 0.3494850021680094 1.6989700043360187 0.0 0.5283773187068795 {I|L}{I|L}[C(Carbamidomethyl (C))N][C(Carbamidomethyl (C))S]{I|L}KQ{I|L};{I|L}[DC]SES{I|L}{I|L}KQ{I|L};{I|L}{I|L}[Y{M(Oxidation (M))|F}]E[WH]Q{I|L};{I|L}{[YD]|[{M(Oxidation (M))|F}M]}AGRDVVQ{I|L};{I|L}[DC]SES{I|L}{I|L}K[AG]{I|L};A[W{M(Oxidation (M))|F}]DD{I|L}{I|L}KQ{I|L};{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QRDVVQ{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}AGRDVVQ{I|L};{I|L}{[YD]|[{M(Oxidation (M))|F}M]}AGR{[QG]|[NA]}KQ{I|L};{I|L}{I|L}[C(Carbamidomethyl (C))N]{M(Oxidation (M))|F}{I|L}A[QA]QA 3.2437;2.6074;2.5281;1.7798;1.6444;1.5084;1.4038;1.3437;1.2702;1.2391 -;-;-;-;-;-;-;-;-;- 4906 + 1 1.989 180999.9 1.0 5168 4454 9621 SUDHL4_400M_050219_1,9624 SUDHL4_400M_050219_1,9624,LLLDAMPFDVV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9625 53.201 800.0 224220.0 25 0 39930.0 + 37833 TLTNIIHNL 9 140 519.8007040944258 1037.5868552556517 2 519.8011962771416 MULTI CID FTMS 0 0 0 9621 116031.2265625 1.0 0 0.0 4 Unmodified _TLTNIIHNL_ ENSG00000128699|ENST00000392349|ORMDL1 118.89474601620944 0.0019711750475752 5 [{I|L}T]TN{I|L}{I|L}HN{I|L} 9 0 + 87.208 0.0 0.0 8.4049 8.4049 91.579 0.0 0.0 0.0 27.147642715192497 6.255410871774856 6.255410871774856 6.255410871774856 0 1.192771648501328 2.0 0.3807196863200844 1.339136830878453 + + [{I|L}T]TN{I|L}{I|L}HN{I|L};[{I|L}T]TN{I|L}{I|L}HQV;[{I|L}T]TGG{I|L}{I|L}HN{I|L};[{I|L}T]TN{I|L}{I|L}HGG{I|L};[{I|L}T]TGG{I|L}{I|L}HQV;[{I|L}T]{I|L}NT{I|L}HN{I|L};[{I|L}T]TN{I|L}{I|L}H[AG]V;[{I|L}T]N{I|L}HN{I|L}T{I|L};[{I|L}T]{I|L}NT{I|L}HQV;[EP]R{I|L}{I|L}NTPV 8.4049;7.802;7.5175;6.973;6.9146;6.6989;6.3701;6.2613;6.096;5.7428 +;-;-;-;-;-;-;-;-;- + 2697 + 1 1.989 136532.9 0.4399999976158142 5169 4454 9621 SUDHL4_400M_050219_1,9625 SUDHL4_400M_050219_1,9625,TLTNIIHNL True True TLTNIIHNL 53.200875 519.801196277142 631552.75 9621.0 ENSG00000128699|ENST00000392349|ORMDL1 5.674417813618978 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9626 53.215 800.0 49157.0 25 0 7988.4 + 7845 ELKVRLEKKLR 11 61 706.4584399048962 1410.9023268765925 2 706.9603759646416 MULTI CID FTMS 0 0 0 9621 79082.484375 1.0 0 0.0 5 Unmodified _ELKVRLEKKLR_ REV__ENSG00000168924|ENST00000302787|LETM1;REV__ENST00000466175.5_1_4:1836565-1857677:-|nuORF;REV__ENST00000505551.5_1_4:1836565-1844755:-|nuORF;REV__ENST00000512669.1_1_4:1836565-1841051:-|nuORF;REV__nc|ENSG00000168924|O95202-2|LETM1;REV__nc|ENSG00000168924|O95202-3|LETM1 1.3295316138638542 0.8688751186870782 5 VV[DP] 4 -1 16.198 0.0 0.0 1.1481 0.0 0.0 982.6748010970986 0.0 982.6748010970986 0.0 0.7479428389387266 0.0 0.0 0 0.0 0.0 0.0 0.0 VV[DP] 1.1481 - 44 + 1 1.989 37246.1 0.3899999856948852 5170 4454 9621 SUDHL4_400M_050219_1,9626 SUDHL4_400M_050219_1,9626,ELKVRLEKKLR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9627 53.219 235.0 738900.0 25 0 49012.0 -1 0 123 902.4168056674936 1802.8190584017875 2 902.919482409954 MULTI CID FTMS 0 0 0 9621 296435.1875 0.1842761093854112 -2 0.1053924560546875 6 5 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F}YEV 14 -1 70.651 0.0 0.0 3.9189 0.0 0.0 0.0 127.07176112579522 127.07176112579522 45.11738475277326 0.0 0.0 0.0 0 0.1989700043360188 1.5228787452803376 0.0 1.4361818737241734 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F}YEV 3.9189 - 4806 1 1.989 118423.8 1.0 5171 4454 9621 SUDHL4_400M_050219_1,9627 SUDHL4_400M_050219_1,9627, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9628 53.224 157.0 1196400.0 25 0 214320.0 + 34054 SLLDPVPEV 9 73 968.5304276740944 967.5231512074944 1 968.5295898318292 MULTI CID FTMS 0 0 0 9621 277555.25 0.176814628928027 -2 0.1053924560546875 7 Unmodified _SLLDPVPEV_ ENSG00000089154|ENST00000300648|GCN1 117.7605887643192 0.0024069341015653 5 {[TV]|[{I|L}S]}{I|L}DPVEPV 9 2 + 92.59 0.0 0.0 9.5698 9.5698 93.259 0.0 0.0 0.0 14.554687406276017 16.478174818886373 14.554687406276017 7.7815125038364386 0 2.094187677400525 1.3979400086720375 1.305462187404089 0.0 {[TV]|[{I|L}S]}{I|L}DPVEPV;{[TV]|[{I|L}S]}{I|L}DPVPEV;[VP]S{I|L}EVEPV;{[TV]|[{I|L}S]}{I|L}DPEVPV;[VP]D{I|L}TVEPV;[EP]VVTVEPV;[VP]EVTVEPV;[VP]S{I|L}D{I|L}EPV;{[TV]|[{I|L}S]}{I|L}EPDVPV;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}PVEPV 9.5698;8.7655;8.0655;7.7274;7.7261;7.5441;7.415;7.4013;7.363;7.2634 -;+;-;-;-;-;-;-;-;- + 1666 1 1.989 127149.8 1.0 5172 4454 9621 SUDHL4_400M_050219_1,9628 SUDHL4_400M_050219_1,9628,SLLDPVPEV True True SLLDPVPEV 53.223737 968.529589831829 24756985.5 9621.0 ENSG00000089154|ENST00000300648|GCN1 6.960527578989665 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9629 53.238 800.0 78162.0 25 0 1344.7 -1 0 99 1169.344531238079 0 1169.344531238079 PEAK CID FTMS 0 0 0 -1 0 8 5 T 1 -1 5.4846 0.0 0.0 0.23472 0.0 0.0 2055.535393187293 177.06794153385002 2232.603334721143 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.23472 - 12 + 1 1.989 46785.2 0.6299999952316284 5173 4454 9621 SUDHL4_400M_050219_1,9629 SUDHL4_400M_050219_1,9629, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9630 53.245 442.0 341430.0 25 0 4070.7 -1 0 96 1165.1933426021233 0 1165.189257800579 PEAK CID FTMS 0 0 0 9621 127724.6875 1.0 0 0.0 9 5 Y 1 -1 3.9794 0.0 0.0 0.17091 0.0 0.0 924.8031147923342 1237.4900606744752 2162.2931754668093 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.17091 - 4 + 1 1.989 85694.3 1.0 5174 4454 9621 SUDHL4_400M_050219_1,9630 SUDHL4_400M_050219_1,9630, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9632 53.256 392.0 460610.0 25 0 39905.0 + 31310 RMDYPVFTV 9 118 564.2812143983239 1126.5478758634476 2 564.2816650271416 MULTI CID FTMS 0 0 0 9631 208915.484375 0.2412444756193989 3 -0.38006591796875 1 Unmodified _RMDYPVFTV_ ENSG00000091490|ENST00000399878|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;nc|ENSG00000091490|Q68CR1-3|SEL1L3 63.960520009940105 0.0238892913700936 5 {NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}YPV{M(Oxidation (M))|F}TV 10 3 + 71.691 0.0 0.0 6.3638 6.3638 82.726 0.0 0.0 0.0 1.322805052014246 15.026975159433531 1.322805052014246 1.322805052014246 0 0.8807196863200843 1.2218487496163564 0.805462187404089 0.6747425010840047 {NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}YPV{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[DC]PV{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}T]V[DC]PV{M(Oxidation (M))|F}TV;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{I|L}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}T][WM]PV{M(Oxidation (M))|F}TV;{[QN]|[E{I|L}]|[KN]}[YC(Carbamidomethyl (C))]PV{M(Oxidation (M))|F}TV;{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}TV;{[ET]|[MV]}VW{M(Oxidation (M))|F}V{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[TP]{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}T]V[TP]{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}TV 6.3638;6.2464;5.5555;5.5168;4.6654;4.5193;4.3771;4.2799;3.9615;3.2706 -;-;-;-;-;-;-;-;-;- 1074 1 1.981 145682.0 1.0 5175 4455 9631 SUDHL4_400M_050219_1,9632 SUDHL4_400M_050219_1,9632,RMDYPVFTV True True RMDYPVFTV 53.256333 564.281665027142 19021527.0 9631.0 ENSG00000091490|ENST00000399878|SEL1L3;;nc|ENSG00000091490|Q68CR1-2|SEL1L3;;nc|ENSG00000091490|Q68CR1-3|SEL1L3 7.58552344640096 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9633 53.262 329.0 423130.0 25 0 23399.0 + 43313 WLDETLAQV 9 152 537.7773582134572 1073.5401634937143 2 537.7772094607353 MULTI CID FTMS 0 0 0 9631 301413.40625 0.8018209257573848 -1 0.1005783081054687 2 Unmodified _WLDETLAQV_ ENSG00000145332|ENST00000273963|KLHL8;nc|ENSG00000145332|Q9P2G9-2|KLHL8 85.35673624503755 0.0162188719545379 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}AD{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]} 10 5 + 66.155 0.0 0.0 6.1624 6.1624 87.865 0.0 0.0 0.0 6.765997036641593 4.259687322722812 4.259687322722812 6.765997036641593 0 1.0994850021680094 0.9208187539523752 2.610924374808178 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}AD{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};[W{I|L}]DET{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}W{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}TAD{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}WET{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}A{I|L}DA{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}ETAD{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}AVEA{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}WTE{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};[W{I|L}]DTE{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]} 6.1624;5.5321;5.4797;5.4162;5.2927;5.2349;5.1976;5.0644;5.0377;5.0217 -;+;-;-;-;-;-;-;-;- + 5571 1 1.981 112882.0 1.0 5176 4455 9631 SUDHL4_400M_050219_1,9633 SUDHL4_400M_050219_1,9633,WLDETLAQV True True DPNLFGIAQV 53.262321 537.777209460735 0.0 9631.0 ENSG00000214954|ENST00000448384|LRRC69;;nc|ENSG00000214954|Q6ZNQ3-2|LRRC69 1.548593819141388 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9634 53.273 603.0 274910.0 25 0 23049.0 + 44338 YLPPGFLSA 9 129 482.7606986657654 0 482.7606994509697 PEAK CID FTMS 0 0 0 9631 275516.15625 0.8975838126749809 1 -0.1357536315917968 3 Unmodified _YLPPGFLSA_ ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-4|SREBF1 67.03532852164291 0.0144670426088899 5 AS{I|L}PP 5 7 27.802 0.0 0.0 2.8855 0.0 0.0 294.1573093414933 201.06780420474848 495.2251135462418 0.0 0.0 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 AS{I|L}PP 2.8855 - 418 + 1 1.981 134627.7 1.0 5177 4455 9631 SUDHL4_400M_050219_1,9634 SUDHL4_400M_050219_1,9634,YLPPGFLSA True True YLPPGFLSA 53.272843 482.76069945097 13538585.0 9631.0 ENST00000395756.5_1_17:17715938-17721122:-|nuORF;;ENSG00000072310|ENST00000261646|SREBF1;;nc|ENSG00000072310|P36956-4|SREBF1 7.075166384379069 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9635 53.287 800.0 890150.0 25 0 79929.0 + 9204 FGGVLILIHR 10 176 562.8505269049455 1123.6865008766908 2 562.8499633669853 MULTI CID FTMS 0 0 0 9631 222529.015625 0.0491739936031318 -1 0.1005783081054687 4 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 97.07464715276576 0.0088266272690559 5 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 139.83 0.0 0.0 12.444 12.444 95.732 0.0 0.0 0.0 36.47817481888639 15.08762266618993 15.08762266618993 9.208187539523747 0 2.56295299324845 2.0 0.0 2.5607391022493964 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;{I|L}VN{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}RH;{I|L}VGG{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}RH;{I|L}VN{M(Oxidation (M))|F}{I|L}{I|L}{I|L}RH;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}HR{I|L};{I|L}VGG{M(Oxidation (M))|F}{I|L}{I|L}{I|L}RH;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}HR{I|L} 12.444;11.624;11.369;11.101;10.55;10.282;10.027;9.6429;9.2073;8.8234 -;-;-;-;-;-;-;-;-;- 5206 + 1 1.981 524901.1 0.6600000262260437 5178 4455 9631 SUDHL4_400M_050219_1,9635 SUDHL4_400M_050219_1,9635,FGGVLILIHR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9636 53.301 800.0 129500.0 25 0 16285.0 28503 PTKKALKQRFL 11 128 665.4192633018442 1328.8239736704884 2 665.4198486208916 MULTI CID FTMS 0 0 0 9631 200822.0625 0.7346778769254795 1 -0.1357536315917968 5 Unmodified _PTKKALKQRFL_ ENSG00000120049|ENST00000356640|KCNIP2;nc|ENSG00000120049|Q9NS61-2|KCNIP2;nc|ENSG00000120049|Q9NS61-6|KCNIP2 2.9952420565917617 0.861016188266951 5 [DP]W{I|L}A{I|L} 6 8 21.296 0.0 0.0 1.6026 0.0 0.0 0.0 630.4336287820696 630.4336287820696 10.186379463354037 0.0 0.0 0.0 0 0.0 0.585026652029182 0.3807196863200844 0.0 [DP]W{I|L}A{I|L} 1.6026 - 157 1 1.981 83677.6 0.6299999952316284 5179 4455 9631 SUDHL4_400M_050219_1,9636 SUDHL4_400M_050219_1,9636,PTKKALKQRFL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9637 53.307 377.0 541460.0 25 0 74781.0 + 11782 GLLENIRQL 9 144 528.3145860870573 0 528.3149902224541 PEAK CID FTMS 0 0 0 9631 183228.296875 1.0 0 0.0 6 Unmodified _GLLENIRQL_ ENSG00000131437|ENST00000403231|KIF3A;ENST00000487055.1_1_5:132036305-132039285:-|nuORF;nc|ENSG00000131437|Q9Y496|KIF3A 107.1870275148908 0.01101572304534 5 {I|L}EN{I|L}RSS 7 4 58.879 0.0 0.0 5.583 0.0 0.0 170.10435388551247 82.06701074771718 252.17136463322964 0.0 0.0 0.0 0.0 0 1.4436726795685342 0.0 0.6505149978319906 1.4361818737241734 {I|L}EN{I|L}RSS 5.583 - 2420 + 1 1.981 152978.3 1.0 5180 4455 9631 SUDHL4_400M_050219_1,9637 SUDHL4_400M_050219_1,9637,GLLENIRQL True True GLLENIRQL 53.307289 528.314990222454 1705107.75 9631.0 ENST00000487055.1_1_5:132036305-132039285:-|nuORF;;ENSG00000131437|ENST00000403231|KIF3A;;nc|ENSG00000131437|Q9Y496|KIF3A 5.478994528452556 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9638 53.321 784.0 180870.0 25 0 22789.0 + 17347 KLYDGFQYL 9 146 573.7952127803453 0 573.7945434451103 PEAK CID FTMS 0 0 0 9631 120405.1328125 1.0 0 0.0 7 Unmodified _KLYDGFQYL_ ENSG00000143393|ENST00000368873|PI4KB;nc|ENSG00000143393|Q9UBF8-2|PI4KB;nc|ENSG00000143393|Q9UBF8-3|PI4KB 36.506200033944 0.0788933506710822 5 YQ{M(Oxidation (M))|F}GD 5 7 42.251 0.0 0.0 3.6881 0.0 0.0 131.0880580738248 401.2201326959594 532.3081907697842 0.0 0.0 0.0 0.0 0 0.5 0.0 0.6549471895720984 0.4247425010840047 YQ{M(Oxidation (M))|F}GD 3.6881 - 1653 + 1 1.981 107919.1 1.0 5181 4455 9631 SUDHL4_400M_050219_1,9638 SUDHL4_400M_050219_1,9638,KLYDGFQYL True True KLYDGFQYL 53.320858 573.79454344511 737242.3125 9631.0 nc|ENSG00000143393|Q9UBF8-2|PI4KB;;ENSG00000143393|ENST00000368873|PI4KB;;nc|ENSG00000143393|Q9UBF8-3|PI4KB 5.498144467671712 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9639 53.336 800.0 133380.0 25 0 18862.0 22796 LQSYRFIKKL 10 103 648.3929777673518 0 648.3935424685478 PEAK CID FTMS 0 0 0 9631 120753.3203125 0.333677039730482 5 -0.4510421752929687 8 Unmodified _LQSYRFIKKL_ ENSG00000186111|ENST00000335312|PIP5K1C;nc|ENSG00000186111|O60331-2|PIP5K1C;nc|ENSG00000186111|O60331-3|PIP5K1C;nc|ENSG00000186111|O60331-4|PIP5K1C 6.2057823575117 0.3961065659209838 5 {I|L} 1 9 6.9897 0.0 0.0 0.53984 0.0 0.0 646.4764940095098 532.1877535455686 1178.6642475550784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.53984 + + 12 + 1 1.981 90880.6 0.449999988079071 5182 4455 9631 SUDHL4_400M_050219_1,9639 SUDHL4_400M_050219_1,9639,LQSYRFIKKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9640 53.35 800.0 115250.0 25 0 25640.0 + 27212 PGKRRRLGAER 11 99 432.5976358942692 1294.7710782830077 3 432.5974609255791 MULTI CID FTMS 0 0 0 9631 106369.8984375 0.37004468036347 5 -0.4510421752929687 9 Unmodified _PGKRRRLGAER_ REV__ENSG00000136710|ENST00000259229|CCDC115;REV__nc|ENSG00000136710|Q96NT0-2|CCDC115 2.735195868890462 0.8622431031272658 5 {M(Oxidation (M))|F} 1 -1 2.7642 0.0 0.0 0.21349 0.0 0.0 772.5820656871077 372.13837610416255 1144.7204417912703 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.21349 - 4 + 1 1.981 81307.1 0.3899999856948852 5183 4455 9631 SUDHL4_400M_050219_1,9640 SUDHL4_400M_050219_1,9640,PGKRRRLGAER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9641 53.364 800.0 175900.0 25 0 9879.9 + 9443 FLASESLIKQI 11 120 624.8630283253266 1247.711503717453 2 624.8639404177666 MULTI CID FTMS 0 0 0 9631 94201.078125 0.9403287681659432 1 -0.1357536315917968 10 Unmodified _FLASESLIKQI_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 63.960520009940105 0.0530716371881472 5 CA{[ES]|[DT]|[{I|L}C]}{[TV]|[{I|L}S]}{I|L}KQ{I|L} 10 2 20.298 0.0 0.0 1.6268 0.0 0.0 157.16970791842806 0.0 157.16970791842806 0.0 5.260438859878146 0.0 0.0 0 1.2134679910804405 0.0 0.3054621874040891 0.9392404878284264 CA{[ES]|[DT]|[{I|L}C]}{[TV]|[{I|L}S]}{I|L}KQ{I|L} 1.6268 - 820 + 1 1.981 112195.6 0.4000000059604645 5184 4455 9631 SUDHL4_400M_050219_1,9641 SUDHL4_400M_050219_1,9641,FLASESLIKQI True True FLASESLIKQI 53.363809 624.863940417767 1551558.875 9631.0 ENST00000478340.2_1_6:35437033-35438524:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;;ENSG00000198755|ENST00000322203|RPL10A 4.593007723490397 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9642 53.374 521.0 394100.0 25 0 21541.0 + -1 MNWRYCRLWCL 11 156 837.3805268201337 1672.7465007070673 2 837.3774902224541 MULTI CID FTMS 0 0 0 9631 311203.34375 1.0 0 0.0 11 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))NWRYC(Carbamidomethyl (C))RLWC(Carbamidomethyl (C))L_ REV__ENST00000584052.5_1_18:21043977-21044085:+|nuORF 1.4819007175156935 0.86815623132643 5 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 12 -1 98.529 0.0 0.0 5.8902 0.0 0.0 248.0917683332047 0.0 248.0917683332047 0.0 73.62904104171733 0.0 0.0 0 1.2544321917401078 0.0 1.066901560044258 1.1861818737241734 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 5.8902 - 5337 1 1.981 136711.4 1.0 5185 4455 9631 SUDHL4_400M_050219_1,9642 SUDHL4_400M_050219_1,9642,MNWRYCRLWCL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9643 53.381 406.0 335780.0 25 0 21056.0 + 28372 PSLGAGLL 8 113 727.4349161494745 726.4276396828744 1 729.4407226443291 MULTI CID FTMS 0 0 0 9631 214344.625 0.8273234921762223 -1 0.1005783081054687 12 Unmodified _PSLGAGLL_ ENSG00000138802|ENST00000265175|SEC24B;nc|ENSG00000138802|O95487-2|SEC24B;nc|ENSG00000138802|O95487-3|SEC24B 24.67388899826682 0.525179942228231 5 {I|L}W 2 7 8.5835 0.0 0.0 1.1816 0.0 0.0 147.09861197624576 277.1396883600219 424.2383003362677 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}W 1.1816 - 213 + 1 1.981 99672.4 1.0 5186 4455 9631 SUDHL4_400M_050219_1,9643 SUDHL4_400M_050219_1,9643,PSLGAGLL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9645 53.386 24.0 1461900.0 25 0 98991.0 + 20246 LLDLKPELAAQ 11 63 605.8557385267492 1209.6969241202985 2 605.8562499880791 MULTI CID FTMS 0 0 0 9644 2210275.5 0.0455942864319157 6 -0.3817710876464844 1 Unmodified _LLDLKPELAAQ_ REV__ENSG00000108465|ENST00000338399|CDK5RAP3;REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF;REV__nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-3|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 13.042465956692816 0.7638483625850725 5 [TP]AAVQ[RV]A 9 -1 37.304 0.0 0.0 3.0837 0.0 0.0 0.0 313.1493607368686 313.1493607368686 3.6586501115676455 0.0 0.0 0.0 0 0.3494850021680094 1.0 1.174742501084005 0.0 [TP]AAVQ[RV]A 3.0837 - 272 1 1.97 31031.1 1.0 5187 4456 9644 SUDHL4_400M_050219_1,9645 SUDHL4_400M_050219_1,9645,LLDLKPELAAQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9646 53.387 11.0 7078500.0 25 0 1028900.0 + 9200 FGGVLILIHR 10 69 375.56933832341485 1123.6861855704446 3 375.5695373415947 MULTI CID FTMS 0 0 0 9644 8997176.0 1.0 0 0.0 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 30.63653989081413 0.2803493085145199 5 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 85.724 0.0 0.0 7.6288 7.6288 93.691 0.0 0.0 0.0 71.28653141768609 18.78022170376731 18.78022170376731 9.208187539523747 0 0.7302046884880937 2.0 0.0 0.3807196863200844 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 7.6288;6.8093 -;- 104 + 1 1.97 66453.0 1.0 5188 4456 9644 SUDHL4_400M_050219_1,9646 SUDHL4_400M_050219_1,9646,FGGVLILIHR False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9647 53.389 70.0 1219000.0 25 0 137370.0 + 15086 IMLEALERV 9 86 537.3042933537342 1072.5940337742684 2 537.3051025271416 MULTI CID FTMS 0 0 0 9644 717643.5625 0.4775710454858642 -1 0.1357536315917968 3 Unmodified _IMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 49.55428908609986 0.0413471690215031 5 {I|L}M{I|L}EA{I|L}ERV 9 0 + 94.791 0.0 0.0 8.8376 8.8376 97.096 0.0 0.0 0.0 48.444327309673255 13.46787486224656 13.46787486224656 14.943415770716156 0 0.805462187404089 2.0 0.3494850021680094 0.2887254899964357 + + {I|L}M{I|L}EA{I|L}ERV;{I|L}M{I|L}V[DV]ERV;{I|L}M{I|L}VE[DV]RV;{I|L}M{I|L}EV[DV]RV;{I|L}MV{I|L}[DV]ERV;{I|L}MV[DV]{I|L}ERV;{I|L}MV{I|L}E[DV]RV;{[QN]|[E{I|L}]|[KN]}A[R{M(Oxidation (M))|F}]V{I|L}[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{I|L}[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}V[EP] 8.8376;7.4444;6.8831;6.8088;6.4985;6.4242;5.9372;4.5122;4.2459;4.1212 +;-;-;-;-;-;-;-;-;- + 418 + 1 1.97 68538.0 1.0 5189 4456 9644 SUDHL4_400M_050219_1,9647 SUDHL4_400M_050219_1,9647,IMLEALERV True True IMLEALERV 53.388811 537.305102527142 34028616.0 9644.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 6.275324980417888 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9648 53.393 243.0 119310.0 25 0 36155.0 -1 0 47 768.4770357956563 1534.9395186581123 2 768.4777099490166 MULTI CID FTMS 0 0 0 9644 464467.71875 1.0 0 0.0 4 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.97 31316.3 1.0 5190 4456 9644 SUDHL4_400M_050219_1,9648 SUDHL4_400M_050219_1,9648, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9649 53.397 177.0 630620.0 25 0 81482.0 + 17919 KQVEEIFNL 9 123 560.3059742787633 0 560.3062011599541 PEAK CID FTMS 0 0 0 9644 319981.6875 1.0 0 0.0 5 Unmodified _KQVEEIFNL_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 103.35351024395868 0.0202588131840038 5 N{M(Oxidation (M))|F}{I|L}EEVGN 8 6 62.72 0.0 0.0 5.607 0.0 0.0 131.09594406358275 82.06707178287343 213.16301584645612 0.0 0.0 0.0 0.0 0 1.066901560044258 0.0 1.4604093769761874 1.4361818737241734 N{M(Oxidation (M))|F}{I|L}EEVGN 5.607 - 1590 + 1 1.97 87676.0 1.0 5191 4456 9644 SUDHL4_400M_050219_1,9649 SUDHL4_400M_050219_1,9649,KQVEEIFNL True True KQVEEIFNL 53.396828 560.306201159954 2102225.5 9644.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 4.549278100331624 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9650 53.405 459.0 168080.0 25 0 63375.0 + 3392 AYRLRRRRPFK 11 75 759.9632159287349 1517.9118789242698 2 759.9635497927666 MULTI CID FTMS 0 0 0 9644 223948.703125 1.0 0 0.0 6 Unmodified _AYRLRRRRPFK_ REV__ENST00000287934.3_1_7:90894005-90894200:+|nuORF 0.3070304955306653 0.8736993455979228 5 R 1 -1 2.2185 0.0 0.0 0.14615 0.0 0.0 1147.6908533889166 211.0983980768188 1358.789251465735 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.14615 + + 3 + 1 1.97 67624.0 1.0 5192 4456 9644 SUDHL4_400M_050219_1,9650 SUDHL4_400M_050219_1,9650,AYRLRRRRPFK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9651 53.412 414.0 327220.0 25 0 90649.0 + 22817 LRGGPSFA 8 100 402.7210991463994 0 402.7211181521416 PEAK CID FTMS 0 0 0 9644 140895.140625 1.0 0 0.0 7 Unmodified _LRGGPSFA_ REV__ENST00000374647.9_1_9:111696295-111696367:-|nuORF 8.593279151180031 0.5573742999696857 5 T 1 -1 8.7371 0.0 0.0 1.0875 0.0 0.0 402.1832175336408 297.17072473697505 699.3539422706158 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.25 0.0 T 1.0875 - 20 + 1 1.97 109441.4 1.0 5193 4456 9644 SUDHL4_400M_050219_1,9651 SUDHL4_400M_050219_1,9651,LRGGPSFA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9652 53.426 800.0 97329.0 25 0 6528.5 + 34056 SLLDPVPEV 9 116 484.7684318729834 967.5223108127668 2 484.7687866091728 MULTI CID FTMS 0 0 0 9644 135966.9375 1.0 0 0.0 8 Unmodified _SLLDPVPEV_ ENSG00000089154|ENST00000300648|GCN1 29.84058131909904 0.1515068451768857 5 {[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}PV 6 3 26.884 0.0 0.0 2.7787 0.0 0.0 0.0 340.1497166297923 340.1497166297923 2.703037561203842 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[TV]|[{I|L}S]}{NN|[MP]|[D{I|L}]|[EV]}PV 2.7787 + + 249 1 1.97 65531.2 0.4900000095367431 5194 4456 9644 SUDHL4_400M_050219_1,9652 SUDHL4_400M_050219_1,9652,SLLDPVPEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9653 53.44 800.0 163400.0 25 0 21844.0 1545 ALKYLLHR 8 142 507.3155002774229 1012.616447621646 2 507.3132812380791 MULTI CID FTMS 0 0 0 9644 107892.8828125 0.4963110592680754 -4 0.3417243957519531 9 Unmodified _ALKYLLHR_ ENSG00000165816|ENST00000392982|VWA2;nc|ENSG00000165816|Q5GFL6-2|VWA2 12.531546534597751 0.7257836412119636 5 {M(Oxidation (M))|F}D{I|L}{I|L}{I|L}HR 7 4 36.936 0.0 0.0 3.6475 0.0 0.0 100.0784526479816 0.0 100.0784526479816 0.0 22.665798329691995 0.0 0.0 0 0.2302046884880938 0.0 0.0 0.6989700043360187 {M(Oxidation (M))|F}D{I|L}{I|L}{I|L}HR 3.6475 - 828 + 1 1.97 112341.9 0.4199999868869781 5195 4456 9644 SUDHL4_400M_050219_1,9653 SUDHL4_400M_050219_1,9653,ALKYLLHR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9654 53.448 448.0 213950.0 25 0 23139.0 + 34466 SMAELDIKL 9 103 510.2752837932126 0 510.2763244509697 PEAK CID FTMS 0 0 0 9644 105167.75 1.0 0 0.0 10 Unmodified _SMAELDIKL_ ENSG00000135249|ENST00000257700|RINT1 29.84058131909904 0.1118629134628069 5 AE{I|L}D{I|L}K 6 3 24.87 0.0 0.0 2.4417 0.0 0.0 218.0704015232522 128.07233606510002 346.14273758835225 0.0 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.2614393726401688 0.0 + AE{I|L}D{I|L}K 2.4417 + + 96 + 1 1.97 78825.5 1.0 5196 4456 9644 SUDHL4_400M_050219_1,9654 SUDHL4_400M_050219_1,9654,SMAELDIKL True True SMAELDIKL 53.447957 510.27632445097 713665.5625 9644.0 ENSG00000135249|ENST00000257700|RINT1 5.092539151509603 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9655 53.46 680.0 156190.0 25 0 10189.0 9332 FIKEGVLVE 9 118 517.2988982738666 1032.583243614533 2 517.2996703982353 MULTI CID FTMS 0 0 0 9644 100871.21875 1.0 0 0.0 11 Unmodified _FIKEGVLVE_ ENSG00000001561|ENST00000321037|ENPP4 54.773552608820026 0.0299037012502309 5 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{I|L}K{I|L}EV 9 7 + 74.449 0.0 0.0 7.21 7.21 87.9 0.0 0.0 0.0 3.949209558385604 16.478174818886373 3.949209558385604 3.949209558385604 0 0.7134679910804405 1.3010299956639813 0.9105162882498864 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{I|L}K{I|L}EV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}KR{I|L}EV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}GVK{I|L}EV;{[TV]|[{I|L}S]}[MT]{I|L}K{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}G[K{I|L}]{M(Oxidation (M))|F}{I|L}EV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}RK{I|L}EV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}K[VG]{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EKR{I|L}EV;{[QN]|[E{I|L}]|[KN]}[RK]{M(Oxidation (M))|F}{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EGVK{I|L}EV 7.21;6.8276;6.342;6.2139;6.2126;6.0061;5.9306;5.5841;5.4707;5.0985 -;-;-;-;-;-;-;-;-;- 1033 1 1.97 85487.0 1.0 5197 4456 9644 SUDHL4_400M_050219_1,9655 SUDHL4_400M_050219_1,9655,FIKEGVLVE True False KLVGEFLEV 53.459794 517.299670398235 539394.25 9644.0 nc|ENSG00000065427|Q15046-2|KARS1;;ENSG00000065427|ENST00000302445|KARS1 1.4357403914133708 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9656 53.471 536.0 516120.0 25 0 73781.0 + 2917 AVGFLLRH 8 125 456.7739187435016 0 456.7728454470634 PEAK CID FTMS 0 0 0 9644 94231.8203125 1.0 0 0.0 12 Unmodified _AVGFLLRH_ ENST00000396437.3_1_22:42341142-42343146:-|nuORF;nc|ENSG00000100162|Q9NSP4-2|CENPM 42.96799951952854 0.1251824406268783 5 N{I|L}{I|L}{I|L}H 5 5 44.508 0.0 0.0 4.8828 0.0 0.0 147.06589451160067 171.0893496149047 318.1552441265054 0.0 0.0 0.0 0.0 0 1.274227503252014 0.0 0.0 0.3807196863200844 N{I|L}{I|L}{I|L}H 4.8828 - 123 + 1 1.97 216212.8 1.0 5198 4456 9644 SUDHL4_400M_050219_1,9656 SUDHL4_400M_050219_1,9656,AVGFLLRH True False False False non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_1 9657 53.481 585.0 256670.0 25 0 44326.0 + 31014 RLFDEPQLASL 11 93 644.8486444103173 1287.6827358874343 2 644.8486816287041 MULTI CID FTMS 0 0 0 9644 95563.3359375 0.5439309320480928 1 -0.1735000610351562 13 Unmodified _RLFDEPQLASL_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1 46.0223103267499 0.1396584557920269 5 {[TV]|[{I|L}S]}A{I|L}{M(Oxidation (M))|F}EPQ{I|L}AS{I|L} 12 4 + 72.756 0.0 0.0 5.6502 5.6502 83.421 0.0 0.0 0.0 3.344537511509316 5.068721510623973 3.344537511509316 3.344537511509316 0 1.3182503180159344 1.3010299956639813 0.6203715150305281 0.3807196863200844 {[TV]|[{I|L}S]}A{I|L}{M(Oxidation (M))|F}EPQ{I|L}AS{I|L};{[SA]|[TG]}{I|L}{I|L}{M(Oxidation (M))|F}EPQ{I|L}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}QPE{[QN]|[E{I|L}]|[KN]}AS{I|L};[{M(Oxidation (M))|F}V]RQPE{[QN]|[E{I|L}]|[KN]}AS{I|L};{[TV]|[{I|L}S]}A{I|L}{M(Oxidation (M))|F}EP[AG]{I|L}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}[AG]PE{[QN]|[E{I|L}]|[KN]}AS{I|L};[{I|L}A]S{I|L}{M(Oxidation (M))|F}EPQ{I|L}AS{I|L};{[SA]|[TG]}{I|L}{I|L}{M(Oxidation (M))|F}EP[AG]{I|L}AS{I|L};[{M(Oxidation (M))|F}V]R[AG]PE{[QN]|[E{I|L}]|[KN]}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}QP[NS]{[VA]|[{I|L}G]}AS{I|L} 5.6502;5.3904;5.2565;4.8535;4.6479;4.55;4.5263;4.3882;4.1446;3.8937 -;-;-;-;-;-;-;-;-;- 675 1 1.97 116794.6 1.0 5199 4456 9644 SUDHL4_400M_050219_1,9657 SUDHL4_400M_050219_1,9657,RLFDEPQLASL False True RLFDEPQLASL 53.480936 644.848681628704 3190212.25 9644.0 nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1;;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;;ENSG00000133243|ENST00000255608|BTBD2 7.879188855489095 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9658 53.488 394.0 207020.0 25 0 7578.8 -1 0 120 809.554523744273 0 809.5162231326103 PEAK CID FTMS 0 0 0 9644 11378.9140625 0.363991073790424 -1 0.1357536315917968 14 5 WD 2 -1 7.9588 0.0 0.0 0.49217 0.0 0.0 1053.892323998689 259.07355676822505 1312.965880766914 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WD 0.49217 - 46 + 1 1.97 58553.2 1.0 5200 4456 9644 SUDHL4_400M_050219_1,9658 SUDHL4_400M_050219_1,9658, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9659 53.496 419.0 142650.0 25 0 49876.0 + 40560 VKFYNRRIRHL 11 76 751.4495738362025 1500.8845947392049 2 751.4492065310478 MULTI CID FTMS 0 0 0 9644 239583.46875 1.0 0 0.0 15 Unmodified _VKFYNRRIRHL_ REV__chr3:109647655-109648024|10|13.1|0.0|20.32|+|0|TE_info:L1PA7,L1PA7_dup2442,L1,LINE,acceptor,+,109648024,109653403|LINC01205,None|96 1.1933415558491238 0.8695176722560516 5 [{I|L}V]N 3 -1 10.379 0.0 0.0 0.69153 0.0 0.0 0.0 1171.6665215793018 1171.6665215793018 6.884249941294065 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 [{I|L}V]N 0.69153 - 17 1 1.97 56645.8 1.0 5201 4456 9644 SUDHL4_400M_050219_1,9659 SUDHL4_400M_050219_1,9659,VKFYNRRIRHL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9660 53.501 256.0 696570.0 25 0 48195.0 -1 0 137 957.9586992921012 1913.902845651002 2 959.4640380740166 MULTI CID FTMS 0 0 0 9644 210155.203125 0.5310092384223617 -1 0.1357536315917968 16 5 QVEY{M(Oxidation (M))|F}ANQQAE[PA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 15 -1 113.12 0.0 0.0 5.9107 0.0 0.0 0.0 128.07198511295158 128.07198511295158 61.052863618019714 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 2.1610892374447825 QVEY{M(Oxidation (M))|F}ANQQAE[PA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)) 5.9107 - 11689 + 1 1.97 119788.0 1.0 5202 4456 9644 SUDHL4_400M_050219_1,9660 SUDHL4_400M_050219_1,9660, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9661 53.515 800.0 100990.0 25 0 3096.7 -1 0 94 1057.421573542999 0 1057.563647449017 PEAK CID FTMS 0 0 0 9644 30523.857421875 1.0 0 0.0 17 5 VV 2 -1 10.969 0.0 0.0 0.51917 0.0 0.0 1702.6124819475235 209.05718408756096 1911.669666035085 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VV 0.51917 - 113 + 1 1.97 55380.6 0.8199999928474426 5203 4456 9644 SUDHL4_400M_050219_1,9661 SUDHL4_400M_050219_1,9661, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9662 53.529 800.0 161130.0 25 0 3670.0 -1 0 138 1052.8581133498187 0 1052.843066394329 PEAK CID FTMS 0 0 0 -1 0 18 5 {M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}D 5 -1 10.106 0.0 0.0 0.48039 0.0 0.0 1168.3000146861625 353.1104830377563 1521.4104977239188 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 {M(Oxidation (M))|F}{[CT]|[{M(Oxidation (M))|F}G]}{I|L}D 0.48039 - 657 + 1 1.97 81998.6 0.7799999713897705 5204 4456 9644 SUDHL4_400M_050219_1,9662 SUDHL4_400M_050219_1,9662, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9663 53.544 800.0 203020.0 25 0 12162.0 + 44319 YLNLDVPQV 9 141 530.7874244481492 1059.5602959630985 2 530.7875244021416 MULTI CID FTMS 0 0 0 9644 160788.09375 1.0 0 0.0 19 Unmodified _YLNLDVPQV_ chr7:102289517-102300522|27|12.96|0.03|8.86|+|0|None,SH2B2|1 78.14939416004806 0.0179651292570206 5 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}YV 6 5 48.903 0.0 0.0 4.6154 0.0 0.0 0.0 339.165512675214 339.165512675214 16.00621433104977 0.0 0.0 0.0 0 0.7742275032520141 1.0 0.2614393726401688 1.569341519366547 {[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}YV 4.6154 - 2333 1 1.97 137964.9 0.5400000214576721 5205 4456 9644 SUDHL4_400M_050219_1,9663 SUDHL4_400M_050219_1,9663,YLNLDVPQV True True YLNLDVPQV 53.54421 530.787524402142 560800.1875 9644.0 chr7:102289517-102300522|27|12.96|0.03|8.86|+|0|None,SH2B2|1 6.594318866729736 2.0 True 9.0 False splicing PXD020620_cell_line SUDHL4_400M_050219_1 9664 53.555 601.0 195320.0 25 0 5913.4 -1 0 129 916.6707011081278 0 916.9327270388604 PEAK CID FTMS 0 0 0 9644 21050.89453125 1.0 0 0.0 20 5 S{I|L}{I|L}S 4 -1 11.402 0.0 0.0 0.62262 0.0 0.0 1118.914911048135 309.15744959049067 1428.0723606386257 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S{I|L}{I|L}S 0.62262 - 346 + 1 1.97 75640.5 1.0 5206 4456 9644 SUDHL4_400M_050219_1,9664 SUDHL4_400M_050219_1,9664, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9666 53.559 25.0 3224400.0 25 0 344790.0 + 9205 FGGVLILIHR 10 76 562.8505269049455 1123.6865008766908 2 562.8508178591728 MULTI CID FTMS 0 0 0 9665 1344834.875 0.2971787807301529 1 -0.0708122253417968 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 5 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 111.38 0.0 0.0 9.912 9.912 95.477 0.0 0.0 0.0 87.88032523080815 16.8348435778082 16.8348435778082 9.208187539523747 0 1.579689690656103 2.0 0.0 0.6989700043360187 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 9.912;9.0926 -;- 194 + 1 2.088 67169.1 1.0 5207 4457 9665 SUDHL4_400M_050219_1,9666 SUDHL4_400M_050219_1,9666,FGGVLILIHR False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9667 53.562 93.0 682960.0 25 0 49124.0 -1 0 78 902.4168056674936 1802.8190584017875 2 902.4190551638604 MULTI CID FTMS 0 0 0 9665 249921.0625 0.1424820371389834 1 -0.0708122253417968 2 5 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 15 -1 + 79.734 0.0 0.0 4.4227 4.4227 78.353 0.0 0.0 0.0 11.237125054200234 7.3188422383910705 7.3188422383910705 2.1876531584792502 0 0.218765315847925 1.3979400086720375 0.0 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEA[AG]QNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQ[AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQGGA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEA[AG]QNA{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQ[AG]NA{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQGGA{M(Oxidation (M))|F}[C(Carbamidomethyl (C))M][{I|L}V];[YQ]VCEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]VCEA[AG]QNA{M(Oxidation (M))|F}YQ[{I|L}V] 4.4227;4.3014;3.9218;3.9218;3.9218;3.8004;3.8004;3.8004;3.7994;3.2985 -;-;-;-;-;-;-;-;-;- 904 1 2.088 51266.3 1.0 5208 4457 9665 SUDHL4_400M_050219_1,9667 SUDHL4_400M_050219_1,9667, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9668 53.563 72.0 895910.0 25 0 115310.0 + 16828 KIADFGWSV 9 84 511.7689513323304 1021.5233497314608 2 511.7690307497978 MULTI CID FTMS 0 0 0 9665 747581.4375 0.5713425450212826 -1 0.1735000610351562 3 Unmodified _KIADFGWSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;ENSG00000087586|ENST00000395915|AURKA;ENSG00000105146|ENST00000302804|AURKC;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000105146|Q9UQB9-2|AURKC;nc|ENSG00000105146|Q9UQB9-3|AURKC;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 32.78568957990786 0.1150597335874693 5 [VS][Q{I|L}]{M(Oxidation (M))|F}GWSV 9 4 + 45.366 0.0 0.0 4.441 4.441 87.9 0.0 0.0 0.0 2.164537177296495 28.3759123398972 2.164537177296495 18.296896906561027 0 0.8935078169319297 1.3010299956639813 0.3252574989159953 0.3054621874040891 [VS][Q{I|L}]{M(Oxidation (M))|F}GWSV;[VS][Q{I|L}]WSG{M(Oxidation (M))|F}V;{[QD]|[EN]|[WG]|[KD]|[RS]}[W{M(Oxidation (M))|F}][K{I|L}]W;[VS][Q{I|L}]W{[CT]|[{M(Oxidation (M))|F}G]}SV;{[QD]|[EN]|[WG]|[KD]|[RS]}AAY[R{I|L}]SV;{[CT]|[{M(Oxidation (M))|F}G]}[R{I|L}]Y[HM]V;[{M(Oxidation (M))|F}V][SG][K{I|L}]ADW;[{M(Oxidation (M))|F}V][SG]G{M(Oxidation (M))|F}[Q{I|L}][PA];{[WS]|[C(Carbamidomethyl (C)){I|L}]}[MT]A[K{I|L}]SV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[R{I|L}]W 4.441;2.6498;2.4506;1.8931;1.3779;1.2359;1.1163;0.89927;0.83668;0.73069 -;-;-;-;-;-;-;-;-;- 359 1 2.088 54396.8 1.0 5209 4457 9665 SUDHL4_400M_050219_1,9668 SUDHL4_400M_050219_1,9668,KIADFGWSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9669 53.575 696.0 84278.0 25 0 24643.0 + 43457 WTRLNRPLKR 10 69 670.405758919674 1338.796964906148 2 670.9070922732353 MULTI CID FTMS 0 0 0 9665 117909.2421875 1.0 0 0.0 4 Unmodified _WTRLNRPLKR_ REV__ENST00000256412.8_1_8:24250814-24253263:+|nuORF 1.4819007175156935 0.719781833666733 5 P 1 -1 0.71334 0.0 0.0 0.053282 0.0 0.0 1118.66537113349 120.05091272525624 1238.7162838587462 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.053282 + + 5 + 1 2.088 57826.2 1.0 5210 4457 9665 SUDHL4_400M_050219_1,9669 SUDHL4_400M_050219_1,9669,WTRLNRPLKR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9670 53.589 800.0 147480.0 25 0 25254.0 + 9558 FLHYIKLIRH 10 115 447.27290887507775 1338.7968972254332 3 447.6073181033134 MULTI CID FTMS 0 0 0 9665 88835.4609375 1.0 0 0.0 5 Unmodified _FLHYIKLIRH_ REV__ENSG00000149311|ENST00000675843|ATM;REV__ENST00000524792.5_1_11:108158320-108236232:+|nuORF;REV__ENST00000533733.5_1_11:108158320-108160529:+|nuORF 3.2813086475875832 0.7114585191678878 5 {I|L}{I|L}HR 4 -1 10.934 0.0 0.0 0.81674 0.0 0.0 801.4565174420333 0.0 801.4565174420333 0.0 2.112137043523237 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}HR 0.81674 - 20 + 1 2.088 105106.2 0.8999999761581421 5211 4457 9665 SUDHL4_400M_050219_1,9670 SUDHL4_400M_050219_1,9670,FLHYIKLIRH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9671 53.595 297.0 859640.0 25 0 323750.0 + 16830 KIADFGWSV 9 110 1022.5309488327824 1021.5236723661824 1 1022.529833972454 MULTI CID FTMS 0 0 0 9665 311988.15625 0.5625335186128244 -2 0.3092536926269531 6 Unmodified _KIADFGWSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;ENSG00000087586|ENST00000395915|AURKA;ENSG00000105146|ENST00000302804|AURKC;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000105146|Q9UQB9-2|AURKC;nc|ENSG00000105146|Q9UQB9-3|AURKC;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 114.20165948288296 0.0037743244297685 5 [TP]TK{M(Oxidation (M))|F}GWSV 9 4 + 74.247 0.0 0.0 7.2682 7.2682 92.951 0.0 0.0 0.0 0.0590931091579847 47.424033937241546 0.0590931091579847 9.208187539523747 0 1.0 0.0 1.677825934852436 0.2396518287104437 [TP]TK{M(Oxidation (M))|F}GWSV;[TP]TK{M(Oxidation (M))|F}G{[DA]|[EG]}SV;[TP]TK{M(Oxidation (M))|F}G{[SA]|[TG]}DV;[TP]TK{M(Oxidation (M))|F}SRSV;[TP]TK{M(Oxidation (M))|F}SKDV;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}DA{I|L}KSV;[TP]TK{M(Oxidation (M))|F}S[VG]SV;[TP]TK{M(Oxidation (M))|F}SSRV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[MT]A{I|L}KSV;[TP]TK{M(Oxidation (M))|F}SS[VG]V 7.2682;6.3668;5.9442;5.5126;5.09;4.9698;4.6112;4.4557;3.572;3.5543 -;-;-;-;-;-;-;-;-;- 1433 1 2.088 166323.7 1.0 5212 4457 9665 SUDHL4_400M_050219_1,9671 SUDHL4_400M_050219_1,9671,KIADFGWSV True True KIADFGWSV 53.594633 1022.52983397245 21340609.75 9665.0 nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;ENSG00000105146|ENST00000302804|AURKC;;nc|ENSG00000105146|Q9UQB9-2|AURKC;;nc|ENSG00000178999|Q96GD4-2|AURKB;;nc|ENSG00000105146|Q9UQB9-3|AURKC;;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;;ENSG00000087586|ENST00000395915|AURKA 8.381811618804932 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9672 53.608 800.0 293900.0 25 0 6835.8 -1 0 154 1164.538481525006 3490.5936151752185 3 1165.210375964642 MULTI CID FTMS 0 0 0 9665 242925.765625 0.3856503602537299 -9 0.7886962890625 7 5 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQAED 14 -1 70.691 0.0 0.0 2.0252 0.0 0.0 1485.7258916418184 333.13263879947505 1818.8585304412927 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3494850021680094 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQAED 2.0252 - 7781 + 1 2.088 133427.7 0.8399999737739563 5213 4457 9665 SUDHL4_400M_050219_1,9672 SUDHL4_400M_050219_1,9672, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9673 53.612 164.0 406140.0 25 0 54992.0 + 17277 KLQDQIFNL 9 81 559.8137428967478 0 559.8135864138603 PEAK CID FTMS 0 0 0 9665 134707.90625 0.9390918026872692 -1 0.1735000610351562 8 Unmodified _KLQDQIFNL_ ENSG00000148908|ENST00000369103|RGS10;nc|ENSG00000148908|O43665-1|RGS10;nc|ENSG00000148908|O43665-2|RGS10 66.45667989310934 0.0141522131504411 5 N{M(Oxidation (M))|F}{I|L}QD 5 7 49.654 0.0 0.0 4.4428 0.0 0.0 131.09231626048933 366.2159823053344 497.30829856582375 0.0 0.0 0.0 0.0 0 1.110924374808178 0.0 0.6861818737241735 0.7614393726401688 N{M(Oxidation (M))|F}{I|L}QD 4.4428 - 292 + 1 2.088 56075.7 1.0 5214 4457 9665 SUDHL4_400M_050219_1,9673 SUDHL4_400M_050219_1,9673,KLQDQIFNL True True KLQDQIFNL 53.611729 559.81358641386 1237244.75 9665.0 ENSG00000148908|ENST00000369103|RGS10;;nc|ENSG00000148908|O43665-2|RGS10;;nc|ENSG00000148908|O43665-1|RGS10 4.405236879984538 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9674 53.626 800.0 138140.0 25 0 18479.0 + 14833 ILFSEGLIKA 10 112 545.8295872726065 0 545.8294555544853 PEAK CID FTMS 0 0 0 9665 92977.40625 1.0 0 0.0 9 Unmodified _ILFSEGLIKA_ ENSG00000039123|ENST00000230640|MTREX 47.594388314883695 0.0621511126303334 5 {I|L}{M(Oxidation (M))|F}SW{I|L}{I|L} 6 5 23.065 0.0 0.0 2.1167 0.0 0.0 113.08473302072224 214.12058435611564 327.2053173768379 0.0 0.0 0.0 0.0 0 0.8182503180159344 0.0 0.4247425010840047 0.0 {I|L}{M(Oxidation (M))|F}SW{I|L}{I|L} 2.1167 - 288 + 1 2.088 89101.4 0.3899999856948852 5215 4457 9665 SUDHL4_400M_050219_1,9674 SUDHL4_400M_050219_1,9674,ILFSEGLIKA True True ILFSEGLIKA 53.625562 545.829455554485 611560.4375 9665.0 ENSG00000039123|ENST00000230640|MTREX 5.518481095631917 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9676 53.636 440.0 196480.0 25 0 28709.0 + 20289 LLDVPTAAV 9 104 898.524069123817 897.5167926572169 1 898.5257446169853 MULTI CID FTMS 0 0 0 9675 88521.4765625 0.0001248945842989 73 -1.8294677734375 1 Unmodified _LLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 39.957323273325 0.0756908302845263 5 [TP]AAVD{I|L}{I|L}V 9 8 + 42.685 0.0 0.0 4.7559 4.7559 82.348 0.0 0.0 0.0 12.28643603481708 26.614874718797743 12.28643603481708 4.94850021680093 0 0.0 0.0 0.6643943297944485 0.0 [TP]AAVD{I|L}{I|L}V;[TP]AAV{[QN]|[E{I|L}]|[KN]}VV;[TP]AA{I|L}{NN|[MP]|[D{I|L}]|[EV]}VV;[TP]AA{I|L}[DV]{I|L}V;[TP][Q{I|L}]D{I|L}{I|L}V;[VS][PG]VD{I|L}{I|L}V;RRQ[TP][Q{I|L}];[TP][Q{I|L}]{[QN]|[E{I|L}]|[KN]}VV;[TP][RV]{NN|[MP]|[D{I|L}]|[EV]}VV;[VS][RP][RN]AV 4.7559;4.2045;3.9574;3.6219;1.8071;1.437;1.4235;1.2557;1.0086;0.92342 -;-;-;-;-;-;-;-;-;- 305 1 2.088 59581.8 1.0 5216 4458 9675 SUDHL4_400M_050219_1,9676 SUDHL4_400M_050219_1,9676,LLDVPTAAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9677 53.64 240.0 447600.0 25 0 58922.0 + + 1831 ILMGVLKEV 9 120 501.30336749257776 1000.5921820519555 2 501.3050414919853 MULTI CID FTMS 0 0 0 9675 146647.59375 0.8463978577096507 1 -0.0422096252441406 2 Unmodified _ALTLKTNQL_ ENSG00000109606|ENST00000336812|DHX15 18.13498045792455 0.3457906370836843 5 {I|L}{I|L}MR{I|L} 5 -1 39.844 0.0 0.0 3.982 0.0 0.0 0.0 371.1942843072876 371.1942843072876 12.946055715060544 0.0 0.0 0.0 0 0.2396518287104437 2.0 0.0 0.0 {I|L}{I|L}MR{I|L} 3.982 - 637 + 1 2.088 85276.8 1.0 5217 4458 9675 SUDHL4_400M_050219_1,9677 SUDHL4_400M_050219_1,9677,ALTLKTNQL False False ILMGVLKEV 53.64037 501.305041491985 600206.125 9675.0 ENSG00000109606|ENST00000336812|DHX15 4.533121426900228 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9678 53.654 800.0 75222.0 25 0 25703.0 + 33202 SFIFIKLKFTL 11 68 678.9192660743065 1355.823979215413 2 678.9188110232353 MULTI CID FTMS 0 0 0 9675 118799.4375 0.6824127721076819 -2 0.2443122863769531 3 Unmodified _SFIFIKLKFTL_ REV__ENST00000460072.5_1_2:39984490-39995716:-|nuORF 5.731851221503515 0.8481046878870278 5 {I|L} 1 -1 9.9148 0.0 0.0 0.73128 0.0 0.0 1224.7290523128722 0.0 1224.7290523128722 0.0 6.419983281826003 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.73128 + + 12 + 1 2.088 61881.0 0.4399999976158142 5218 4458 9675 SUDHL4_400M_050219_1,9678 SUDHL4_400M_050219_1,9678,SFIFIKLKFTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9679 53.668 800.0 187920.0 25 0 13700.0 + 29610 QLVRDLLEV 9 137 542.821432840369 1083.6283127475378 2 542.8211547732353 MULTI CID FTMS 0 0 0 9675 90210.1875 1.0 0 0.0 4 Unmodified _QLVRDLLEV_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 157.7952019732125 0.0013334662702519 5 [Q{I|L}]VRD{I|L}{I|L}EV 9 0 + 91.656 0.0 0.0 8.4583 8.4583 91.13 0.0 0.0 0.0 7.635120737627702 14.973024840566469 7.635120737627702 5.532803640157255 0 1.3441876774005248 1.5228787452803376 1.6421590589602533 2.1861818737241734 + + [Q{I|L}]VRD{I|L}{I|L}EV;[Q{I|L}]{[QN]|[E{I|L}]|[KN]}Q{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}AAQ{I|L}{I|L}EV;[AG]{I|L}VRD{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[RV]Q{I|L}{I|L}EV;[Q{I|L}]V[VG]D{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}VAAQ{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[Q{I|L}]Q{I|L}{I|L}EV;[AG]{I|L}{[QN]|[E{I|L}]|[KN]}Q{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[RN]{I|L}{I|L}EV 8.4583;7.9477;7.7537;7.7095;7.7065;7.6085;7.4592;7.4119;7.1989;7.1509 +;-;-;-;-;-;-;-;-;- + 1990 1 2.088 118169.3 0.3600000143051147 5219 4458 9675 SUDHL4_400M_050219_1,9679 SUDHL4_400M_050219_1,9679,QLVRDLLEV True True QLVRDLLEV 53.668039 542.821154773235 592866.125 9675.0 ENSG00000109320|ENST00000226574|NFKB1;;nc|ENSG00000109320|P19838|NFKB1;;nc|ENSG00000109320|P19838-3|NFKB1 6.0962815284729 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9681 53.672 24.0 2936000.0 25 0 383430.0 + 9201 FGGVLILIHR 10 77 375.56933832341485 1123.6861855704446 3 375.5693237185478 MULTI CID FTMS 0 0 0 9680 1467474.25 0.1631038728152033 3 -0.0952491760253906 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 5 N{I|L}{I|L}{I|L}HR 6 5 58.481 0.0 0.0 5.2044 0.0 0.0 359.2178163801746 0.0 359.2178163801746 0.0 44.96908472919306 0.0 0.0 0 0.5451140161145328 0.0 0.0 1.1883753548010496 N{I|L}{I|L}{I|L}HR 5.2044 - 119 + 1 2.093 63509.3 1.0 5220 4459 9680 SUDHL4_400M_050219_1,9681 SUDHL4_400M_050219_1,9681,FGGVLILIHR False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9682 53.674 60.0 1682900.0 25 0 197470.0 + 15087 IMLEALERV 9 76 537.3042933537342 1072.5940337742684 2 537.3049194216728 MULTI CID FTMS 0 0 0 9680 767879.25 0.5110014433236155 2 -0.0672378540039062 2 Unmodified _IMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 34.93206674587334 0.1032771302489716 5 {I|L}M{I|L}EA{I|L}ERV 9 0 + 87.668 0.0 0.0 8.1735 8.1735 95.591 0.0 0.0 0.0 55.968161070473485 7.714813109343083 7.714813109343083 10.222763947111517 0 0.805462187404089 2.0 0.3807196863200844 0.0 + + {I|L}M{I|L}EA{I|L}ERV;{I|L}M{I|L}EA{I|L}[RD]{I|L};{I|L}M{I|L}V[DV]ERV;{I|L}M{I|L}EAV{[RE]|[WV]}{I|L};{I|L}M{I|L}EAV[W{I|L}]V;{I|L}M{I|L}VE[DV]RV;{I|L}M{I|L}VEA{[RE]|[WV]}{I|L};{I|L}M{I|L}EV[DV]RV;{I|L}M{I|L}VEA[W{I|L}]V;{I|L}M{I|L}EVA{[RE]|[WV]}{I|L} 8.1735;7.2204;6.7802;6.6591;6.5895;6.3354;6.2885;6.2611;6.2189;6.2142 +;-;-;-;-;-;-;-;-;- + 420 + 1 2.093 79520.6 1.0 5221 4459 9680 SUDHL4_400M_050219_1,9682 SUDHL4_400M_050219_1,9682,IMLEALERV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9683 53.677 136.0 637920.0 25 0 39306.0 + 28515 LLLDVPTAAVQA 12 111 605.8557385267492 1209.6969241202985 2 605.8559448122978 MULTI CID FTMS 0 0 0 9680 455620.4375 0.0093986875082358 9 -0.2896766662597656 3 Unmodified _PTLQEVILANL_ ENSG00000216490|ENST00000407280|IFI30 40.23920728925047 0.2087110615831976 5 [TP]AAVQRVA 9 8 59.951 0.0 0.0 4.9559 0.0 0.0 0.0 313.1501259603828 313.1501259603828 26.306138858886 0.0 0.0 0.0 0 0.3252574989159953 1.0969100130080565 2.321051375499123 0.0 [TP]AAVQRVA 4.9559 - 1828 1 2.093 65088.8 1.0 5222 4459 9680 SUDHL4_400M_050219_1,9683 SUDHL4_400M_050219_1,9683,PTLQEVILANL False False LLLDVPTAAVQA 53.676757 605.855944812298 1473575360.0 9680.0 ENSG00000216490|ENST00000407280|IFI30 6.483006795247396 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9684 53.682 281.0 55017.0 25 0 12305.0 + -1 ELRKLMRRKK 10 35 687.4323259272907 1372.8500989213812 2 687.4332763552666 MULTI CID FTMS 0 0 0 9680 145303.71875 0.6504141430121926 -1 0.0422096252441406 4 Oxidation (M) _ELRKLM(Oxidation (M))RRKK_ REV__ENSG00000108592|ENST00000427159|FTSJ3 0.4007161486938917 0.7247829448918255 5 {[QN]|[E{I|L}]|[KN]}A 3 -1 4.1812 0.0 0.0 0.30456 0.0 0.0 0.0 1056.6632757614782 1056.6632757614782 3.802608810399628 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}A 0.30456 - 5 1 2.093 21654.2 1.0 5223 4459 9680 SUDHL4_400M_050219_1,9684 SUDHL4_400M_050219_1,9684,ELRKLMRRKK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9685 53.694 678.0 322140.0 25 0 43316.0 + 9639 FLNGEVIRL 9 136 530.8110091814525 1059.607465429705 2 530.8113891482353 MULTI CID FTMS 0 0 0 9680 108003.3359375 0.3821771982388987 -5 0.5228538513183594 5 Unmodified _FLNGEVIRL_ ENSG00000072506|ENST00000168216|HSD17B10;ENST00000477706.1_1_X:53458354-53459024:-|nuORF;nc|ENSG00000072506|Q99714-2|HSD17B10 69.10491478415734 0.0214449631113747 5 {M(Oxidation (M))|F}{I|L}NGEV{I|L}R{I|L} 9 0 + 79.786 0.0 0.0 7.5297 7.5297 93.479 0.0 0.0 0.0 59.63011499687472 12.787693808482516 12.787693808482516 9.208187539523747 0 0.6643943297944485 0.0 0.2887254899964357 1.4049471895720984 + + {M(Oxidation (M))|F}{I|L}NGEV{I|L}R{I|L};{M(Oxidation (M))|F}{I|L}GGGEV{I|L}R{I|L};{M(Oxidation (M))|F}{I|L}NGE{I|L}VR{I|L};{M(Oxidation (M))|F}{I|L}{I|L}N[DG]{I|L}R{I|L};{M(Oxidation (M))|F}{I|L}N{I|L}[DG]{I|L}R{I|L};{M(Oxidation (M))|F}{I|L}GGGE{I|L}VR{I|L};{M(Oxidation (M))|F}{I|L}{I|L}GG[DG]{I|L}R{I|L};{M(Oxidation (M))|F}{I|L}NGE{I|L}[R{I|L}]V;{M(Oxidation (M))|F}{I|L}{I|L}N{[DA]|[EG]}VR{I|L};{M(Oxidation (M))|F}{I|L}GG{I|L}[DG]{I|L}R{I|L} 7.5297;6.6607;6.3892;6.182;5.8638;5.5201;5.313;5.2056;5.0414;4.9948 +;-;-;-;-;-;-;-;-;- + 1098 + 1 2.093 167332.8 1.0 5224 4459 9680 SUDHL4_400M_050219_1,9685 SUDHL4_400M_050219_1,9685,FLNGEVIRL True True FLNGEVIRL 53.693753 530.811389148235 1561227.625 9680.0 ENST00000477706.1_1_X:53458354-53459024:-|nuORF;;nc|ENSG00000072506|Q99714-2|HSD17B10;;ENSG00000072506|ENST00000168216|HSD17B10 4.405447721481323 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9686 53.697 136.0 449100.0 25 0 256280.0 + 44336 YLPPGFLSA 9 28 964.5143186530532 963.5070421864532 1 964.516650378704 MULTI CID FTMS 0 0 0 9680 341154.03125 0.3421407223255967 6 -0.1726875305175781 6 Unmodified _YLPPGFLSA_ ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-4|SREBF1 24.67388899826682 0.2172451872415813 5 [Y{I|L}]P 3 6 30.686 0.0 0.0 3.1849 0.0 0.0 0.0 587.2847617804521 587.2847617804521 8.46787486224656 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + [Y{I|L}]P 3.1849 + + 19 + 1 2.093 50243.5 1.0 5225 4459 9680 SUDHL4_400M_050219_1,9686 SUDHL4_400M_050219_1,9686,YLPPGFLSA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9688 53.707 458.0 409100.0 25 0 26013.0 + 17303 KLSEIPLTL 9 148 507.3155002774229 1012.616447621646 2 507.3156005740166 MULTI CID FTMS 0 0 0 9687 217389.640625 1.0 0 0.0 1 Unmodified _KLSEIPLTL_ ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B 66.45667989310934 0.0225072657982126 5 [{I|L}T]DK{I|L}P{I|L}T{I|L} 9 3 + 88.624 0.0 0.0 8.752 8.752 88.481 0.0 0.0 0.0 5.314789170422557 16.478174818886373 5.314789170422557 2.703037561203842 0 1.3494850021680094 1.3010299956639813 1.829689690656103 0.0 [{I|L}T]DK{I|L}P{I|L}T{I|L};[{I|L}T]D{I|L}KP{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}SK{I|L}P{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}S{I|L}KP{I|L}T{I|L};[{I|L}T]{I|L}DKP{I|L}T{I|L};[{I|L}P]T{I|L}DK{I|L}T{I|L};[{I|L}T]P{I|L}DK{I|L}T{I|L};[{I|L}T]DK{I|L}PT{I|L}{I|L};[{I|L}P]TD{I|L}K{I|L}T{I|L};[{I|L}T]PD{I|L}K{I|L}T{I|L} 8.752;8.4851;8.2272;7.9602;7.8666;7.8657;7.8205;7.1138;7.0972;7.052 -;-;-;-;-;-;-;-;-;- 3271 1 2.093 148471.3 1.0 5226 4460 9687 SUDHL4_400M_050219_1,9688 SUDHL4_400M_050219_1,9688,KLSEIPLTL True True KLSEIPLTL 53.707139 507.315600574017 1846874.875 9687.0 ENSG00000009954|ENST00000339594|BAZ1B;;nc|ENSG00000009954|Q9UIG0-2|BAZ1B 4.346213658650716 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9689 53.712 279.0 406780.0 25 0 21731.0 -1 0 119 880.8974654629454 1759.7803779926908 2 880.8975707888603 MULTI CID FTMS 0 0 0 9687 136577.5625 0.872643971374045 1 -0.0384712219238281 2 5 {M(Oxidation (M))|F}ANQQAG{[QC]|[C(Carbamidomethyl (C))A]}C(Carbamidomethyl (C)){I|L} 11 -1 61.006 0.0 0.0 3.4667 0.0 0.0 521.2823600529092 0.0 521.2823600529092 0.0 53.55829536934014 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 {M(Oxidation (M))|F}ANQQAG{[QC]|[C(Carbamidomethyl (C))A]}C(Carbamidomethyl (C)){I|L} 3.4667 - 1082 + 1 2.093 79785.1 1.0 5227 4460 9687 SUDHL4_400M_050219_1,9689 SUDHL4_400M_050219_1,9689, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9690 53.717 255.0 325280.0 25 0 58701.0 + 34055 SLLDPVPEV 9 54 968.5304276740944 967.5231512074944 1 968.5310546755792 MULTI CID FTMS 0 0 0 9687 181703.59375 0.1157530023438404 4 -0.1070098876953125 3 Unmodified _SLLDPVPEV_ ENSG00000089154|ENST00000300648|GCN1 74.19965305603844 0.0194755241623067 5 {[TV]|[{I|L}S]}{I|L}DPV[EP]V 9 0 + 76.36 0.0 0.0 7.8924 7.8924 96.19 0.0 0.0 0.0 15.395906230238126 13.46787486224656 13.46787486224656 15.395906230238126 0 2.0669015600442577 1.3010299956639813 1.079689690656103 0.0 + + {[TV]|[{I|L}S]}{I|L}DPV[EP]V;{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]}PV[EP]V;{[TV]|[{I|L}S]}{I|L}DPE[VP]V;[VP]S{I|L}EV[EP]V;{NN|[MP]|[D{I|L}]|[EV]}PVTV[EP]V;[VP]D{I|L}TV[EP]V;[VP]EVTV[EP]V;{[TV]|[{I|L}S]}[VP]EV[EP]V;{[TV]|[{I|L}S]}{I|L}EPD[VP]V;[VP]DVT{I|L}[EP]V 7.8924;6.3011;6.0499;5.8746;5.8021;5.673;5.491;5.3453;5.3393;5.253 +;-;-;-;-;-;-;-;-;- + 608 1 2.093 62018.6 1.0 5228 4460 9687 SUDHL4_400M_050219_1,9690 SUDHL4_400M_050219_1,9690,SLLDPVPEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9691 53.721 213.0 252340.0 25 0 19407.0 -1 0 84 931.4216414753824 1860.8287300175648 2 931.4237548708916 MULTI CID FTMS 0 0 0 9687 170029.296875 1.0 0 0.0 4 5 [KT]EY{M(Oxidation (M))|F}ANQQCEEVC(Carbamidomethyl (C)){I|L} 15 -1 + 74.403 0.0 0.0 3.9984 3.9984 78.669 0.0 0.0 0.0 3.4948500216800937 3.4948500216800937 3.4948500216800937 3.4948500216800937 0 0.7302046884880937 0.0 0.0 0.4247425010840047 [KT]EY{M(Oxidation (M))|F}ANQQCEEVC(Carbamidomethyl (C)){I|L};[YQ]VEECQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]CEEVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]QCEEVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}AGGQQCEEVC(Carbamidomethyl (C)){I|L} 3.9984;3.8106;3.5131;3.5131;3.5131 -;-;-;-;- 549 + 1 2.093 47041.8 1.0 5229 4460 9687 SUDHL4_400M_050219_1,9691 SUDHL4_400M_050219_1,9691, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9692 53.735 800.0 145480.0 25 0 18554.0 25356 NAQFKLLLV 9 140 523.3238982175383 1044.6332435018764 2 523.3249389529228 MULTI CID FTMS 0 0 0 9687 94830.6015625 1.0 0 0.0 5 Unmodified _NAQFKLLLV_ ENSG00000111300|ENST00000261745|NAA25;ENST00000549711.5_1_12:112487373-112518932:-|nuORF;ENST00000552527.5_1_12:112478245-112546577:-|nuORF;nc|ENSG00000111300|Q14CX7-2|NAA25 42.09456458481378 0.0639583784996157 5 [{I|L}V]KE[MT]{I|L}V{I|L} 9 8 + 65.722 0.0 0.0 6.2914 6.2914 89.009 0.0 0.0 0.0 8.481116968979023 16.478174818886373 8.481116968979023 8.481116968979023 0 0.8494850021680094 2.0 0.7059771852360797 0.8494850021680094 [{I|L}V]KE[MT]{I|L}V{I|L};{[QG]|[NA]}Q{M(Oxidation (M))|F}{I|L}K{I|L}V{I|L};{[QG]|[NA]}{I|L}Q{M(Oxidation (M))|F}K{I|L}V{I|L};{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K{I|L}V{I|L};{[QG]|[NA]}Q{I|L}{M(Oxidation (M))|F}K{I|L}V{I|L};{[QG]|[NA]}[AG]{M(Oxidation (M))|F}{I|L}K{I|L}V{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QG]|[NA]}{I|L}K{I|L}V{I|L};{[QG]|[NA]}{I|L}[AG]{M(Oxidation (M))|F}K{I|L}V{I|L};[Q{I|L}]GQ{M(Oxidation (M))|F}K{I|L}V{I|L};[K{I|L}]VE[MT]{I|L}V{I|L} 6.2914;5.4795;5.2318;4.9525;4.6065;4.598;4.5649;4.3503;4.2852;4.0246 -;-;-;-;-;-;-;-;-;- 1253 1 2.093 99893.0 0.3600000143051147 5230 4460 9687 SUDHL4_400M_050219_1,9692 SUDHL4_400M_050219_1,9692,NAQFKLLLV True True KLFQGQLVL 53.734976 523.324938952923 681953.0625 9687.0 ENSG00000162607|ENST00000339950|USP1 3.842580715815226 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9694 53.742 215.0 295260.0 25 0 17311.0 + 16777 VLPAVSLEV 9 95 926.564470524888 925.557194058288 1 926.5578491091728 MULTI CID FTMS 0 0 0 9693 157248.71875 0.4247471775649279 -5 0.353759765625 1 Unmodified _KGEPKVLGV_ nc|ENSG00000076108|Q9UIF9|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;ENSG00000076108|ENST00000549884|BAZ2A 30.63653989081413 0.1413794767160703 5 [PA]V{I|L}SEV{I|L}V 9 7 + 54.79 0.0 0.0 5.9197 5.9197 80.306 0.0 0.0 0.0 4.762036441594191 18.09817081947152 4.762036441594191 0.3309188673222962 0 0.2614393726401688 0.0 1.0114393726401687 0.0 [PA]V{I|L}SEV{I|L}V;[PA]V{I|L}VS{I|L}EV;[PA]V{I|L}SV{I|L}EV;[PA]V{I|L}VSE{I|L}V;[PA]{I|L}VSEV{I|L}V;[PA]{I|L}VVS{I|L}EV;[PA]V{I|L}VS[KG]GV;[PA]V{I|L}SVE{I|L}V;[PA]{I|L}VSV{I|L}EV;[PA]{I|L}VVSE{I|L}V 5.9197;5.884;5.6924;5.6647;5.5945;5.5587;5.5078;5.4732;5.3671;5.3395 -;-;-;-;-;-;-;-;-;- 1355 1 2.093 49879.4 1.0 5231 4461 9693 SUDHL4_400M_050219_1,9694 SUDHL4_400M_050219_1,9694,KGEPKVLGV False False VLPAVSLEV 53.741586 926.557849109173 539023.5 9693.0 nc|ENSG00000076108|Q9UIF9|BAZ2A;;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;;ENSG00000076108|ENST00000549884|BAZ2A 3.704135417938232 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9695 53.755 800.0 33521.0 25 0 5705.3 + 13369 HLHLLVPRKLM 11 50 452.9484506485256 1355.8235225457768 3 452.9482910037041 MULTI CID FTMS 0 0 0 9693 40071.2578125 0.495943396682508 1 -0.0280113220214843 2 Unmodified _HLHLLVPRKLM_ REV__ENSG00000164647|ENST00000297205|STEAP1;REV__ENST00000475789.1_1_7:89789075-89791404:+|nuORF 1.3295316138638542 0.8688751186870782 5 {I|L} 1 -1 11.259 0.0 0.0 0.83042 0.0 0.0 1224.728107361986 0.0 1224.728107361986 0.0 5.774509799928715 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.83042 + + 13 + 1 2.093 32625.6 0.3300000131130218 5232 4461 9693 SUDHL4_400M_050219_1,9695 SUDHL4_400M_050219_1,9695,HLHLLVPRKLM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9696 53.758 136.0 723490.0 25 0 34025.0 -1 0 99 957.9586992921012 1913.902845651002 2 957.9598876833916 MULTI CID FTMS 0 0 0 9693 472615.21875 0.93403936164339 -3 0.1094474792480468 3 5 [MN]PN{I|L}NAD[RK][HN]YQS{I|L} 16 -1 + 81.264 0.0 0.0 4.246 4.246 88.103 0.0 0.0 0.0 52.84739747341064 13.958734641205623 13.958734641205623 30.476407645756865 0 0.9291746928241128 1.6989700043360187 0.4247425010840047 1.0994850021680094 [MN]PN{I|L}NAD[RK][HN]YQS{I|L};[NP]{I|L}NMAA[{M(Oxidation (M))|F}V]SDYKSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[YV]NSQYD[RK][HN]YQS{I|L};{[{M(Oxidation (M))|F}D]|MM}NSKYD[RK][HN]YQS{I|L};[NP]{I|L}NA[HN][RK]DYKSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NA[HN][RK]DYQSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QS]|[NT]}{I|L}AT[NP][{M(Oxidation (M))|F}V]SDYKSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[Q{I|L}]SAT[NP][{M(Oxidation (M))|F}V]SDYKSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[RK]DT[NP][{M(Oxidation (M))|F}V]SDYQSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[RK]DT[NP][{M(Oxidation (M))|F}V]SDYKSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 4.246;2.6536;2.6335;2.6335;2.5128;2.5128;1.9831;1.9528;1.5612;1.5612 -;-;-;-;-;-;-;-;-;- 1050 + 1 2.093 69832.0 1.0 5233 4461 9693 SUDHL4_400M_050219_1,9696 SUDHL4_400M_050219_1,9696, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9697 53.763 259.0 273070.0 25 0 68557.0 + 8988 FATFPSSAF 9 78 974.4623809054702 973.4551044388702 1 974.4616577029228 MULTI CID FTMS 0 0 0 9693 198044.75 0.8205326599131735 -1 0.0384712219238281 4 Unmodified _FATFPSSAF_ ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 92.8221339359638 0.0138398038803217 5 [PS]SA{M(Oxidation (M))|F}T{M(Oxidation (M))|F}A{M(Oxidation (M))|F} 9 7 + 60.817 0.0 0.0 6.2476 6.2476 87.883 0.0 0.0 0.0 5.642492736872597 22.60766815646725 5.642492736872597 6.677805497702991 0 0.2742275032520141 0.0 2.504432191740108 0.0 [PS]SA{M(Oxidation (M))|F}T{M(Oxidation (M))|F}A{M(Oxidation (M))|F};[PS]SA{M(Oxidation (M))|F}{M(Oxidation (M))|F}TA{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[MG]|[TS]}T{M(Oxidation (M))|F}A{M(Oxidation (M))|F};{[SA]|[TG]}[PS]{M(Oxidation (M))|F}T{M(Oxidation (M))|F}A{M(Oxidation (M))|F};[PS]SA{M(Oxidation (M))|F}TE[HV];{[MS]|[{M(Oxidation (M))|F}A]}T{M(Oxidation (M))|F}[RD]A{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}T[RD]{M(Oxidation (M))|F}A{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}T{[MG]|[TS]}{[ET]|[MV]}A{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}S{[SA]|[TG]}T{M(Oxidation (M))|F}A{M(Oxidation (M))|F};[PS]S[HV]{M(Oxidation (M))|F}[PG]{M(Oxidation (M))|F} 6.2476;5.5616;4.6981;4.5487;4.48;4.4728;4.2684;4.2171;4.2079;4.1692 -;-;-;-;-;-;-;-;-;- 1488 1 2.093 52672.8 1.0 5234 4461 9693 SUDHL4_400M_050219_1,9697 SUDHL4_400M_050219_1,9697,FATFPSSAF True True FATFPSSAF 53.763036 974.461657702923 3099294.0 9693.0 nc|ENSG00000204843|Q14203-3|DCTN1;;ENSG00000204843|ENST00000628224|DCTN1;;nc|ENSG00000204843|Q14203-4|DCTN1;;nc|ENSG00000204843|Q14203-2|DCTN1;;nc|ENSG00000204843|Q14203-6|DCTN1;;nc|ENSG00000204843|Q14203-5|DCTN1 6.504628976186116 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9699 53.779 800.0 68187.0 25 0 2982.2 -1 0 73 980.2741923536404 0 980.1129028201104 PEAK CID FTMS 0 0 0 9698 12723.38671875 0.2063528838456444 -1 0.0280113220214843 1 5 D 1 -1 2.4743 0.0 0.0 0.12633 0.0 0.0 1262.1513987680244 578.3302096002561 1840.4816083682804 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.12633 - 7 + 1 2.093 41705.6 0.9300000071525574 5235 4462 9698 SUDHL4_400M_050219_1,9699 SUDHL4_400M_050219_1,9699, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9700 53.792 753.0 336930.0 25 0 32530.0 -1 0 102 634.0284058525883 1899.0633881579647 3 634.0286743044853 MULTI CID FTMS 0 0 0 9698 84781.25 1.0 0 0.0 2 5 {I|L}{I|L}TP{I|L}PW[HV]{I|L}G[YT]H[RP] 16 -1 + 80.982 0.0 0.0 4.2643 4.2643 80.135 0.0 0.0 0.0 30.68881289407813 4.823061239584291 4.823061239584291 4.247425010840047 0 0.8494850021680094 1.6989700043360187 0.0 1.6549471895720984 {I|L}{I|L}TP{I|L}PW[HV]{I|L}G[YT]H[RP];{I|L}{I|L}TP{I|L}WP[HV]{I|L}G[YT]H[RP];{I|L}{I|L}TP{I|L}WP[HV]{I|L}G[YT]PP[VP];{I|L}{I|L}TP{I|L}PW[HV]{I|L}G[YT]PP[VP];{I|L}{I|L}TPP{I|L}W[HV]{I|L}G[YT]H[RP];{I|L}{I|L}TPP{I|L}W[HV]{I|L}G[YT]PP[VP];[{I|L}T]PP[YT]G{I|L}[HV]PW{I|L}{I|L}[RH];[{I|L}T]PP[YT]G{I|L}[HV]WP{I|L}{I|L}[RH];[{I|L}T]PP[YT]G{I|L}[HV]W{I|L}{I|L}P[RH];[{I|L}T]PP[YT]G{I|L}[HV]W{I|L}P{I|L}[RH] 4.2643;4.0407;4.0104;4.0104;3.7468;3.6933;1.7628;1.7628;1.4733;1.4457 -;-;-;-;-;-;-;-;-;- 1798 + 1 2.093 187215.9 1.0 5236 4462 9698 SUDHL4_400M_050219_1,9700 SUDHL4_400M_050219_1,9700, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9701 53.8 413.0 192460.0 25 0 9685.3 -1 0 88 1117.783374011517 0 1117.783374011517 PEAK CID FTMS 0 0 0 -1 0 3 5 C(Carbamidomethyl (C)) 1 -1 4.6041 0.0 0.0 0.20613 0.0 0.0 953.0255360095592 1117.4811495416627 2070.506685551222 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.20613 - 20 + 1 2.093 50436.1 1.0 5237 4462 9698 SUDHL4_400M_050219_1,9701 SUDHL4_400M_050219_1,9701, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9704 53.809 154.0 480130.0 25 0 45120.0 + 17283 KLQEFLQTL 9 108 560.3241608380443 1118.6337687428886 2 560.3249999880791 MULTI CID FTMS 0 0 0 9703 277641.84375 0.3001556566043819 -4 0.1070098876953125 1 Unmodified _KLQEFLQTL_ ENSG00000140525|ENST00000310775|FANCI;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-4|FANCI 110.6747026088012 0.0053351249510064 5 [{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}QT{I|L} 10 3 + 99.012 0.0 0.0 8.8511 8.8511 92.485 0.0 0.0 0.0 6.75846205488881 74.84025692326838 6.75846205488881 6.861818737241734 0 1.16944517631652 1.5228787452803376 1.721848749616356 1.548455006504028 [{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}QT{I|L};[{I|L}T][CS]{I|L}K{I|L}QT{I|L};[{I|L}T]Q{M(Oxidation (M))|F}[VG]{I|L}QT{I|L};[{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}[AG]T{I|L};[AG]{I|L}KE{M(Oxidation (M))|F}{I|L}QT{I|L};[AG]E{M(Oxidation (M))|F}{I|L}K{I|L}QT{I|L};[K{I|L}]QE{M(Oxidation (M))|F}{I|L}QT{I|L};[{I|L}T][CS]{I|L}K{I|L}[AG]T{I|L};[AG]{I|L}E{M(Oxidation (M))|F}K{I|L}QT{I|L};[{I|L}T][AG][VG]{M(Oxidation (M))|F}{I|L}QT{I|L} 8.8511;8.2377;8.1311;8.0319;7.625;7.4586;7.4433;7.4185;7.3469;7.3398 -;-;-;-;-;-;+;-;-;- + 3547 1 2.093 64402.0 1.0 5238 4464 9703 SUDHL4_400M_050219_1,9704 SUDHL4_400M_050219_1,9704,KLQEFLQTL True True KLQEFLQTL 53.809082 560.324999988079 11606012.0 9703.0 nc|ENSG00000140525|Q9NVI1-1|FANCI;;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;;ENSG00000140525|ENST00000310775|FANCI;;nc|ENSG00000140525|Q9NVI1-4|FANCI;;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;;nc|ENSG00000140525|Q9NVI1-2|FANCI 5.747330029805501 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9705 53.823 800.0 98296.0 25 0 5920.0 -1 0 100 1126.192065417767 0 1126.192065417767 PEAK CID FTMS 0 0 0 -1 0 2 5 H 1 -1 4.6041 0.0 0.0 0.20459 0.0 0.0 1608.049156615028 502.2271822565063 2110.2763388715343 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.20459 - 20 + 1 2.093 47665.4 0.7599999904632568 5239 4464 9703 SUDHL4_400M_050219_1,9705 SUDHL4_400M_050219_1,9705, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9706 53.827 192.0 156710.0 25 0 9649.3 -1 0 63 883.9174281525445 0 883.9167968630791 PEAK CID FTMS 0 0 0 9703 88061.140625 1.0 0 0.0 3 5 V 1 -1 6.9897 0.0 0.0 0.39583 0.0 0.0 1070.4321940963014 593.2967012994749 1663.7288953957764 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.39583 - 7 + 1 2.093 25611.4 1.0 5240 4464 9703 SUDHL4_400M_050219_1,9706 SUDHL4_400M_050219_1,9706, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9707 53.841 800.0 143080.0 25 0 1984.7 -1 0 115 1138.66621723958 0 1138.542895495892 PEAK CID FTMS 0 0 0 -1 0 4 5 R 1 -1 5.4846 0.0 0.0 0.24105 0.0 0.0 1859.1075809746649 257.09406458072505 2116.20164555539 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.24105 - 68 + 1 2.093 69131.3 0.8100000023841858 5241 4464 9703 SUDHL4_400M_050219_1,9707 SUDHL4_400M_050219_1,9707, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9709 53.847 153.0 810850.0 25 0 103450.0 + 16829 KIADFGWSV 9 125 511.7689513323304 1021.5233497314608 2 511.7692138552666 MULTI CID FTMS 0 0 0 9708 409306.65625 0.3128144907637922 7 -0.3237686157226562 1 Unmodified _KIADFGWSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;ENSG00000087586|ENST00000395915|AURKA;ENSG00000105146|ENST00000302804|AURKC;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000105146|Q9UQB9-2|AURKC;nc|ENSG00000105146|Q9UQB9-3|AURKC;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 66.45667989310934 0.0225072657982126 5 [K{I|L}]AD{M(Oxidation (M))|F}GWSV 9 0 + 73.73 0.0 0.0 7.2177 7.2177 94.051 0.0 0.0 0.0 10.177287669604311 16.478174818886373 10.177287669604311 10.177287669604311 0 0.5 1.2218487496163564 1.2689301784845295 0.0 + + [K{I|L}]AD{M(Oxidation (M))|F}GWSV;[VS][Q{I|L}]{M(Oxidation (M))|F}GWSV;[K{I|L}]ADWG{M(Oxidation (M))|F}SV;[VS]{M(Oxidation (M))|F}G{I|L}KWSV;[VS]{M(Oxidation (M))|F}[K{I|L}]GWSV;[VS]{M(Oxidation (M))|F}G{I|L}KWGE;[K{I|L}]ADWSG{M(Oxidation (M))|F}V;[K{I|L}]AS[MT]WSV;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}DA[K{I|L}]SV;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}SA[R{I|L}]SV 7.2177;6.2214;5.4847;5.197;4.9952;4.9023;4.894;4.8284;4.7754;4.7255 +;-;-;-;-;-;-;-;-;- + 2070 1 2.099 97351.5 1.0 5242 4465 9708 SUDHL4_400M_050219_1,9709 SUDHL4_400M_050219_1,9709,KIADFGWSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9710 53.852 239.0 834050.0 25 0 80548.0 + 25200 MTKILLLHR 9 115 562.8505269049455 1123.6865008766908 2 562.8509399294853 MULTI CID FTMS 0 0 0 9708 340505.75 0.0752442441058842 9 -0.3549766540527344 2 Unmodified _MTKILLLHR_ REV__ENST00000507256.1_1_1:154407503-154427053:+|nuORF 57.72198328787511 0.0273433238377839 5 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 -1 + 122.01 0.0 0.0 10.858 10.858 95.618 0.0 0.0 0.0 92.90196774751512 19.72209847777256 19.72209847777256 9.208187539523747 0 1.9731975075880328 2.0 0.0 1.3684151806525389 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 10.858;10.039 -;- 881 + 1 2.099 154242.7 1.0 5243 4465 9708 SUDHL4_400M_050219_1,9710 SUDHL4_400M_050219_1,9710,MTKILLLHR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9711 53.859 399.0 354430.0 25 0 18040.0 + 45140 YQDPSVLYI 9 118 1097.5515970663905 1096.5443205997904 1 1097.950488269329 MULTI CID FTMS 0 0 0 -1 0 3 Unmodified _YQDPSVLYI_ ENSG00000061273|ENST00000080059|HDAC7;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;ENST00000471235.1_1_12:48181791-48181944:-|nuORF;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7 47.594388314883695 0.0456443387682827 5 [PS]V{I|L}DQYY{I|L} 9 6 + 75.868 0.0 0.0 6.9189 6.9189 85.076 0.0 0.0 0.0 5.198405410982616 16.478174818886373 5.198405410982616 1.843246711440188 0 0.2887254899964357 0.0 1.9291746928241125 0.3054621874040891 [PS]V{I|L}DQYY{I|L};[PS]V{I|L}YDQY{I|L};[PS]V{I|L}DYQY{I|L};[DP]SV{I|L}QYY{I|L};[PS]VD{I|L}QYY{I|L};[DP]SVYQ{I|L}Y{I|L};[PS]VDYQ{I|L}Y{I|L};[DP]SV{I|L}YQY{I|L};[PS]VD{I|L}YQY{I|L};[PS]V{I|L}YD[AG]Y{I|L} 6.9189;6.7508;6.7287;6.4448;6.4385;6.3273;6.3209;6.2546;6.2483;5.911 -;-;-;-;-;-;-;-;-;- 2652 1 2.099 88231.3 1.0 5244 4465 9708 SUDHL4_400M_050219_1,9711 SUDHL4_400M_050219_1,9711,YQDPSVLYI True True YQDPSVLYI 53.858979 1097.95048826933 3161160.0 9708.0 nc|ENSG00000061273|Q8WUI4-3|HDAC7;;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;;nc|ENSG00000061273|Q8WUI4-2|HDAC7;;nc|ENSG00000061273|Q8WUI4|HDAC7;;nc|ENSG00000061273|Q8WUI4-6|HDAC7;;nc|ENSG00000061273|Q8WUI4-10|HDAC7;;nc|ENSG00000061273|Q8WUI4-7|HDAC7;;ENST00000471235.1_1_12:48181791-48181944:-|nuORF;;ENSG00000061273|ENST00000080059|HDAC7;;nc|ENSG00000061273|Q8WUI4-4|HDAC7;;nc|ENSG00000061273|Q8WUI4-9|HDAC7;;nc|ENSG00000061273|Q8WUI4-8|HDAC7 6.656072775522868 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9713 53.874 742.0 216200.0 25 0 4920.1 -1 0 118 1164.538481525006 3490.5936151752185 3 1165.538256824017 MULTI CID FTMS 0 0 0 9712 461966.4375 0.9783893537892276 2 -0.0990142822265625 1 5 QY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 13 -1 42.939 0.0 0.0 1.2301 0.0 0.0 1959.9454930592776 0.0 1959.9454930592776 0.0 14.979979117182973 0.0 0.0 0 0.0 0.0 0.0 0.0 QY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.2301 - 2166 + 1 2.099 96092.6 1.0 5245 4466 9712 SUDHL4_400M_050219_1,9713 SUDHL4_400M_050219_1,9713, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9714 53.876 102.0 864350.0 25 0 78559.0 17371 KMASSSGT 8 69 768.3562862000643 767.3490097334643 1 768.3560668826103 MULTI CID FTMS 0 0 0 9712 527086.875 0.4181405194579309 -2 0.0548858642578125 2 Unmodified _KMASSSGT_ ENSG00000174197|ENST00000703841|MGA;nc|ENSG00000174197|Q8IWI9-3|MGA;nc|ENSG00000174197|Q8IWI9|MGA 2.302733041254933 0.8103549651115762 5 {[DA]|[EG]}TWY{I|L} 6 7 + 39.085 0.0 0.0 5.0936 5.0936 85.586 0.0 0.0 0.0 3.4678748622465605 14.146767060796908 3.4678748622465605 8.33735964571133 0 0.6861818737241735 0.0 1.3807196863200843 0.0 {[DA]|[EG]}TWY{I|L};[WY]{[SA]|[TG]}E{I|L};[WY]E{[SA]|[TG]}{I|L};{[WT]|[RM]}ADY{I|L};{[DA]|[EG]}T{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}{I|L};[WY][{I|L}T]{[DA]|[EG]};{[WT]|[RM]}[YG]E{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}DD{M(Oxidation (M))|F}{I|L};[YE]W{[SA]|[TG]}{I|L} 5.0936;4.007;3.3233;2.705;2.3855;1.6449;1.5096;0.54138;0.035503 -;-;-;-;-;-;-;-;- 232 1 2.099 66945.8 1.0 5246 4466 9712 SUDHL4_400M_050219_1,9714 SUDHL4_400M_050219_1,9714,KMASSSGT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9715 53.88 221.0 382530.0 25 0 16526.0 -1 0 113 902.4168056674936 1802.8190584017875 2 902.9193603396416 MULTI CID FTMS 0 0 0 9712 144203.234375 0.0896425664426818 10 -0.3819351196289062 3 5 {[QV]|[N{I|L}]|[RA]|[KV]}Y[EC]AQQDA 10 -1 38.338 0.0 0.0 2.1266 0.0 0.0 0.0 664.3314795617188 664.3314795617188 16.197887582883936 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}Y[EC]AQQDA 2.1266 - 531 1 2.099 56662.0 1.0 5247 4466 9712 SUDHL4_400M_050219_1,9715 SUDHL4_400M_050219_1,9715, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9716 53.883 111.0 130350.0 25 0 17458.0 -1 0 34 936.120158168815 0 936.121142566204 PEAK CID FTMS 0 0 0 9712 103918.0234375 1.0 0 0.0 4 5 G 1 -1 4.6041 0.0 0.0 0.24618 0.0 0.0 1121.0691604764986 689.1259249322874 1810.1950854087856 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.24618 - 2 + 1 2.099 18158.6 1.0 5248 4466 9712 SUDHL4_400M_050219_1,9716 SUDHL4_400M_050219_1,9716, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9717 53.886 173.0 98308.0 25 0 5278.7 -1 0 48 1089.503196589808 0 1089.651904284954 PEAK CID FTMS 0 0 0 -1 0 5 5 M 1 -1 5.4846 0.0 0.0 0.25193 0.0 0.0 1654.8373735489538 388.10126672916255 2042.9386402781165 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.25193 - 1 + 1 2.099 24552.0 1.0 5249 4466 9712 SUDHL4_400M_050219_1,9717 SUDHL4_400M_050219_1,9717, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9718 53.9 800.0 210090.0 25 0 20105.0 + 9351 FILPKEIAV 9 142 515.3206644556374 1028.6267759780746 2 515.3209106326103 MULTI CID FTMS 0 0 0 9712 99403.6640625 1.0 0 0.0 6 Unmodified _FILPKEIAV_ ENSG00000153107|ENST00000341068|ANAPC1 44.391923383255 0.0526658857881241 5 {[TV]|[{I|L}S]}[PG]{I|L}{I|L}{M(Oxidation (M))|F}{I|L}AV 10 5 + 66.266 0.0 0.0 6.4422 6.4422 87.06 0.0 0.0 0.0 4.771212547196626 16.53212513775344 4.771212547196626 4.771212547196626 0 0.9361818737241736 1.6989700043360187 0.6549471895720984 0.0 {[TV]|[{I|L}S]}[PG]{I|L}{I|L}{M(Oxidation (M))|F}{I|L}AV;[KP]E{I|L}{I|L}{M(Oxidation (M))|F}{I|L}AV;[{I|L}P][SG]{I|L}{I|L}{M(Oxidation (M))|F}{I|L}AV;[{I|L}P]KE{I|L}{M(Oxidation (M))|F}{I|L}AV;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}P{I|L}{M(Oxidation (M))|F}{I|L}AV;[KP]{I|L}E{I|L}{M(Oxidation (M))|F}{I|L}AV;{I|L}{I|L}[SG]P{I|L}{M(Oxidation (M))|F}{I|L}AV;[PS]{[VA]|[{I|L}G]}{I|L}{I|L}{M(Oxidation (M))|F}{I|L}AV;{[QN]|[E{I|L}]|[KN]}KP{I|L}{M(Oxidation (M))|F}{I|L}AV;[{I|L}A][VS]P{I|L}{M(Oxidation (M))|F}{I|L}AV 6.4422;5.9783;5.1104;5.0762;5.049;5.049;4.4258;4.2324;4.0562;3.3712 -;-;-;-;-;-;-;-;-;- 829 1 2.099 132913.6 0.3499999940395355 5250 4466 9712 SUDHL4_400M_050219_1,9718 SUDHL4_400M_050219_1,9718,FILPKEIAV True True FILPKEIAV 53.899842 515.32091063261 422723.90625 9712.0 ENSG00000153107|ENST00000341068|ANAPC1 5.241913000742595 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9720 53.916 800.0 98999.0 25 0 11734.0 -1 0 92 475.7730038065496 1899.0629093597984 4 475.7723876833916 MULTI CID FTMS 0 0 0 9719 20529.88671875 0.2053962217873112 1 -0.0575294494628906 1 5 {I|L}{I|L}W 3 -1 14.693 0.0 0.0 0.77368 0.0 0.0 408.23372342161207 1075.5591063581114 1483.7928297797234 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}W 0.77368 - 69 + 1 2.099 67805.6 0.4600000083446502 5251 4467 9719 SUDHL4_400M_050219_1,9720 SUDHL4_400M_050219_1,9720, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9721 53.93 800.0 128470.0 25 0 11961.0 + 6106 DSTASLELI 9 114 948.4895641057644 947.4822876391644 1 949.4940063357352 MULTI CID FTMS 0 0 0 9719 97417.0 0.6436084674414855 1 -0.0575294494628906 2 Unmodified _DSTASLELI_ CON__P50448 20.453626601364224 0.2830276176381075 5 {[QN]|[E{I|L}]|[KN]}[WE]{I|L}E 6 7 22.72 0.0 0.0 2.398 0.0 0.0 0.0 145.07823725884865 145.07823725884865 -2.7042628290378445 0.0 -2.7042628290378445 0.0 0 0.0 0.0 1.305462187404089 0.0 {[QN]|[E{I|L}]|[KN]}[WE]{I|L}E 2.398 - 411 1 2.099 70195.8 0.550000011920929 5252 4467 9719 SUDHL4_400M_050219_1,9721 SUDHL4_400M_050219_1,9721,DSTASLELI False True False False contaminant PXD020620_cell_line SUDHL4_400M_050219_1 9722 53.944 800.0 225560.0 25 0 66097.0 + 10557 FVFEPPPGV 9 134 988.5126047502742 987.5053282836742 1 988.5071288943292 MULTI CID FTMS 0 0 0 9719 83891.8984375 0.4205576734121976 -4 0.1001205444335937 3 Unmodified _FVFEPPPGV_ ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000555102.1_1_14:102508745-102509707:+|nuORF 44.40701690623563 0.0526327925666318 5 {[VA]|[{I|L}G]}TPPHN[RP] 9 7 + 38.055 0.0 0.0 3.8536 3.8536 75.757 0.0 0.0 0.0 1.5321251377534395 2.996812376923046 1.5321251377534395 1.5321251377534395 0 0.805462187404089 0.0 0.2887254899964357 0.0 {[VA]|[{I|L}G]}TPPHN[RP];[TP]{[VA]|[{I|L}G]}PHN[RP];[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}EPP[RP];{[VA]|[{I|L}G]}TPPEV[{M(Oxidation (M))|F}E];[{M(Oxidation (M))|F}V]E{M(Oxidation (M))|F}PP[RP];{[HG]|PP}[QA]EPP[RP];{[VA]|[{I|L}G]}TPPHGG[RP];{[HG]|PP}D{[NV]|[RG]}PP[RP];[{M(Oxidation (M))|F}E]V{M(Oxidation (M))|F}PP[RP];[PG][{I|L}T]PHN[RP] 3.8536;3.6985;3.6576;3.5502;3.1997;3.0245;2.9212;2.8953;2.8948;2.8642 -;-;-;-;-;-;-;-;-;- 1797 1 2.099 118806.6 0.5400000214576721 5253 4467 9719 SUDHL4_400M_050219_1,9722 SUDHL4_400M_050219_1,9722,FVFEPPPGV True True FVFEPPPGV 53.943922 988.507128894329 1674213.125 9719.0 ENSG00000197102|ENST00000360184|DYNC1H1;;ENST00000555102.1_1_14:102508745-102509707:+|nuORF 4.249267290035884 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9723 53.958 800.0 23208.0 25 0 1533.0 -1 0 52 1035.241870105267 0 1035.241870105267 PEAK CID FTMS 0 0 0 -1 0 4 5 {I|L} 1 -1 3.9794 0.0 0.0 0.19238 0.0 0.0 1238.0817493884654 714.2755831354124 1952.3573325238776 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.19238 - 7 + 1 2.099 20497.6 0.5600000023841858 5254 4467 9719 SUDHL4_400M_050219_1,9723 SUDHL4_400M_050219_1,9723, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9725 53.966 308.0 264670.0 25 0 16276.0 + 20504 LLLHQFAAARA 11 111 605.8557385267492 1209.6969241202985 2 605.8558837771416 MULTI CID FTMS 0 0 0 9724 230055.671875 0.0047456636961118 18 -0.6558609008789062 1 Unmodified _LLLHQFAAARA_ REV__ENSG00000132382|ENST00000254718|MYBBP1A;REV__ENST00000573175.1_1_17:4451225-4453465:-|nuORF;REV__nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 18.1463463914782 0.6576820063886638 5 [TP]AAVQRVA 9 -1 53.667 0.0 0.0 4.4364 0.0 0.0 0.0 313.1504706813677 313.1504706813677 18.69586818113784 0.0 0.0 0.0 0 0.3252574989159953 0.8538719643217619 1.6164934734859662 0.2302046884880938 [TP]AAVQRVA 4.4364 - 2540 1 2.099 62114.8 1.0 5255 4468 9724 SUDHL4_400M_050219_1,9725 SUDHL4_400M_050219_1,9725,LLLHQFAAARA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9726 53.968 112.0 577220.0 25 0 71189.0 + 9202 FGGVLILIHR 10 79 375.56933832341485 1123.6861855704446 3 375.5693847537041 MULTI CID FTMS 0 0 0 9724 331977.5 0.0368979666508691 12 -0.4611892700195312 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 30.63653989081413 0.2803493085145199 5 N{I|L}{I|L}{I|L}HR 6 5 46.631 0.0 0.0 4.1498 0.0 0.0 359.2193178394645 0.0 359.2193178394645 0.0 25.46002544127475 0.0 0.0 0 0.0 0.0 0.0 0.5484550065040282 N{I|L}{I|L}{I|L}HR 4.1498 - 66 + 1 2.099 58347.0 1.0 5256 4468 9724 SUDHL4_400M_050219_1,9726 SUDHL4_400M_050219_1,9726,FGGVLILIHR False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9727 53.972 202.0 440600.0 25 0 73359.0 + 20263 LLDPSVFHV 9 92 513.7844934858363 1025.5544340384724 2 513.7845947146416 MULTI CID FTMS 0 0 0 9724 180793.859375 1.0 0 0.0 3 Unmodified _LLDPSVFHV_ ENSG00000184967|ENST00000330579|NOC4L;ENST00000538784.2_1_12:132635515-132636943:+|nuORF 74.39630413441286 0.0193995060682538 5 {I|L}{I|L}DPSV{M(Oxidation (M))|F}HV 9 0 + 81.169 0.0 0.0 7.9146 7.9146 88.376 0.0 0.0 0.0 27.147642715192504 3.273589343863307 3.273589343863307 3.273589343863307 0 0.8807196863200843 2.0 1.1549471895720984 0.0 + + {I|L}{I|L}DPSV{M(Oxidation (M))|F}HV;{I|L}{I|L}DPSV{M(Oxidation (M))|F}VH;{I|L}{I|L}DPSVH{M(Oxidation (M))|F}V;{I|L}{I|L}DV[PS]{M(Oxidation (M))|F}HV;{I|L}{I|L}DV[PS]{M(Oxidation (M))|F}VH;{I|L}{I|L}DV[PS]H{M(Oxidation (M))|F}V;{I|L}{I|L}DPMPD{I|L}{I|L};{I|L}{I|L}{[ET]|[MV]}[PA]{M(Oxidation (M))|F}HV;{I|L}{I|L}[MT]A{[QN]|[E{I|L}]|[KN]}HV;{I|L}{I|L}{[ET]|[MV]}[PA]{M(Oxidation (M))|F}VH 7.9146;7.5954;7.3276;6.5733;6.2541;5.9863;3.9738;3.939;3.7481;3.6198 +;-;-;-;-;-;-;-;-;- + 493 + 1 2.099 69901.9 1.0 5257 4468 9724 SUDHL4_400M_050219_1,9727 SUDHL4_400M_050219_1,9727,LLDPSVFHV True True LLDPSVFHV 53.971766 513.784594714642 1262035.0 9724.0 ENSG00000184967|ENST00000330579|NOC4L;;ENST00000538784.2_1_12:132635515-132636943:+|nuORF 7.700118700663249 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9728 53.986 800.0 214550.0 25 0 23711.0 + 15088 IMLEALERV 9 128 537.3042933537342 1072.5940337742684 2 537.3049804568291 MULTI CID FTMS 0 0 0 9724 147505.359375 0.0981605526371413 11 -0.3960952758789062 4 Unmodified _IMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 57.72198328787511 0.0273433238377839 5 {I|L}M{I|L}EA{I|L}ERV 9 0 + 97.158 0.0 0.0 9.0582 9.0582 89.066 0.0 0.0 0.0 36.478174818886366 5.229872554949509 5.229872554949509 3.0102999566398125 0 0.805462187404089 2.0 0.3807196863200844 0.9489700043360187 + + {I|L}M{I|L}EA{I|L}ERV;{I|L}M{I|L}AE{I|L}ERV;{I|L}M{I|L}EA{I|L}RD{I|L};{I|L}M{I|L}EA{I|L}REV;{I|L}M{I|L}AE{I|L}RD{I|L};{I|L}M{I|L}AE{I|L}REV;{I|L}M{I|L}V[DV]ERV;{I|L}M{I|L}EAV{[RE]|[WV]}{I|L};{I|L}M{I|L}AEV{[RE]|[WV]}{I|L};{I|L}M{I|L}V[DV]RD{I|L} 9.0582;8.7775;8.5706;8.4749;8.2899;8.1942;7.6359;7.4307;7.1501;7.1483 +;-;-;-;-;-;-;-;-;- + 1028 + 1 2.099 130766.2 0.5199999809265137 5258 4468 9724 SUDHL4_400M_050219_1,9728 SUDHL4_400M_050219_1,9728,IMLEALERV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9729 53.999 800.0 179680.0 25 0 13798.0 + 9697 FLSELTQQL 9 136 539.7922235388035 1077.5698941444068 2 539.7932006716728 MULTI CID FTMS 0 0 0 9724 84753.2265625 0.1893663827000565 8 -0.2829208374023437 5 Unmodified _FLSELTQQL_ ENSG00000240972|ENST00000215754|MIF;ENST00000465752.1_1_22:24236661-24237189:+|nuORF 60.38955033654506 0.025866396858536 5 {[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}[VP]Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 9 5 + 48.582 0.0 0.0 4.5085 4.5085 81.437 0.0 0.0 0.0 9.852796149661875 9.98383614152577 9.852796149661875 4.771212547196626 0 0.0 0.7695510786217261 1.7753187046026264 0.0 {[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}[VP]Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}{I|L}[NP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}[VP][AG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}[NP]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}S{I|L}{[ET]|[MV]}Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}[VP]Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}S{I|L}{M(Oxidation (M))|F}[NP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}{I|L}[NP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}S{I|L}{[ET]|[MV]}[AG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}[VP][AG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4.5085;4.0657;3.654;3.3922;3.2763;3.1882;2.8335;2.7454;2.4217;2.3336 -;-;-;-;-;-;-;-;-;- 2277 1 2.099 113000.4 0.3799999952316284 5259 4468 9724 SUDHL4_400M_050219_1,9729 SUDHL4_400M_050219_1,9729,FLSELTQQL True True FLSELTQQL 53.999431 539.793200671673 3221797.0 9724.0 ENST00000465752.1_1_22:24236661-24237189:+|nuORF;;ENSG00000240972|ENST00000215754|MIF 6.086024284362793 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9730 54.009 562.0 116700.0 25 0 6184.5 -1 0 103 884.8067292019491 0 884.7454711794853 PEAK CID FTMS 0 0 0 9724 31721.61328125 1.0 0 0.0 6 5 S 1 -1 6.9897 0.0 0.0 0.39543 0.0 0.0 1545.4983480749934 132.04604517154533 1677.544393246539 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.39543 - 31 + 1 2.099 48762.0 1.0 5260 4468 9724 SUDHL4_400M_050219_1,9730 SUDHL4_400M_050219_1,9730, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9731 54.023 800.0 54705.0 25 0 1523.7 -1 0 86 1106.4233847188743 0 1106.474536120892 PEAK CID FTMS 0 0 0 -1 0 7 5 V 1 -1 4.6041 0.0 0.0 0.20825 0.0 0.0 1886.649887258258 222.0892733209594 2108.7391605792177 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.20825 - 5 + 1 2.099 33385.1 0.8100000023841858 5261 4468 9724 SUDHL4_400M_050219_1,9731 SUDHL4_400M_050219_1,9731, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9732 54.028 260.0 160640.0 25 0 11936.0 -1 0 81 803.6614451565938 0 803.7153808474541 PEAK CID FTMS 0 0 0 9724 14600.376953125 0.6563445558400883 -1 0.0575294494628906 8 5 Q 1 -1 5.4846 0.0 0.0 0.34165 0.0 0.0 1083.1134043739312 391.1170443170532 1474.2304486909843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.34165 - 3 + 1 2.099 35125.6 1.0 5262 4468 9724 SUDHL4_400M_050219_1,9732 SUDHL4_400M_050219_1,9732, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9733 54.036 408.0 546180.0 25 0 51999.0 + 24606 MLLDVMHTV 9 176 529.7720000230594 1057.529447112919 2 529.7719604372978 MULTI CID FTMS 0 0 0 9724 86269.9453125 1.0 0 0.0 9 Unmodified _MLLDVMHTV_ ENSG00000140694|ENST00000437198|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;nc|ENSG00000140694|O95453-4|PARN 97.07464715276576 0.0121042244793311 5 M{I|L}{I|L}DVMHTV 9 0 + 91.86 0.0 0.0 8.6863 8.6863 91.407 0.0 0.0 0.0 34.09256854528805 5.642714304385635 5.642714304385635 5.642714304385635 0 0.6549471895720985 2.0 2.659379381312206 0.0 + + M{I|L}{I|L}DVMHTV;M{I|L}{I|L}DVMHS{I|L};M{I|L}{I|L}[NG]{[CA]|SS}HTV;M{I|L}{I|L}[{M(Oxidation (M))|F}V]SV{[{M(Oxidation (M))|F}C]|[YS]};M{I|L}[{M(Oxidation (M))|F}V]VTV{[{M(Oxidation (M))|F}C]|[YS]};M{I|L}{I|L}DVHY[PA];M{I|L}{I|L}[NG]{[CA]|SS}HS{I|L};M{I|L}{I|L}DV[WQ][PG];M{I|L}{I|L}DVHH{[HG]|PP};M{I|L}{I|L}[NG][EP]WV 8.6863;8.1527;5.4095;5.0332;5.0248;4.9926;4.8759;4.8667;4.8126;4.582 +;-;-;-;-;-;-;-;-;- + 9834 + 1 2.099 172497.6 1.0 5263 4468 9724 SUDHL4_400M_050219_1,9733 SUDHL4_400M_050219_1,9733,MLLDVMHTV True True MLLDVMHTV 54.036497 529.771960437298 683437.625 9724.0 nc|ENSG00000140694|O95453-3|PARN;;ENSG00000140694|ENST00000437198|PARN;;nc|ENSG00000140694|O95453-4|PARN;;nc|ENSG00000140694|O95453-2|PARN 7.154850482940674 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9735 54.047 397.0 189980.0 25 0 6510.8 -1 0 120 957.9586992921012 1913.902845651002 2 958.4655639529228 MULTI CID FTMS 0 0 0 9734 25766.69921875 0.0535106087416789 7 -0.2038612365722656 1 5 [MN]P{[QV]|[N{I|L}]|[RA]|[KV]}P 6 -1 29.666 0.0 0.0 1.55 0.0 0.0 0.0 1244.5366406886942 1244.5366406886942 13.92960343929056 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [MN]P{[QV]|[N{I|L}]|[RA]|[KV]}P 1.55 - 478 + 1 2.143 54263.3 1.0 5264 4469 9734 SUDHL4_400M_050219_1,9735 SUDHL4_400M_050219_1,9735, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9736 54.051 231.0 534380.0 25 0 32723.0 + 40765 VLKVFLENV 9 152 530.8247283288506 1059.634903724501 2 530.8259155154228 MULTI CID FTMS 0 0 0 9734 136854.09375 0.3921718598421562 -1 0.0790596008300781 2 Unmodified _VLKVFLENV_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 117.7605887643192 0.0024069341015653 5 V{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VKKNV 9 5 + 84.95 0.0 0.0 8.0169 8.0169 88.49 0.0 0.0 0.0 48.12432516150366 13.46787486224656 13.46787486224656 3.215913084054307 0 1.416386562212267 2.0 0.4247425010840047 1.174742501084005 V{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VKKNV;[{I|L}V]KV{M(Oxidation (M))|F}{I|L}ENV;[{I|L}V]K{M(Oxidation (M))|F}V{I|L}ENV;[{I|L}V]{M(Oxidation (M))|F}KV{I|L}ENV;[{I|L}V]KV{M(Oxidation (M))|F}{I|L}EGGV;[{I|L}V]KV{M(Oxidation (M))|F}E{I|L}NV;V{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VKKGGV;V{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V{I|L}RTV;[{I|L}V]K{M(Oxidation (M))|F}{I|L}VENV;[{I|L}V]K{M(Oxidation (M))|F}V{I|L}EGGV 8.0169;7.7134;7.1706;6.8865;6.8444;6.8276;6.8181;6.5125;6.432;6.3016 -;+;-;-;-;-;-;-;-;- + 12488 + 1 2.143 107042.8 1.0 5265 4469 9734 SUDHL4_400M_050219_1,9736 SUDHL4_400M_050219_1,9736,VLKVFLENV True True VLKVFLENV 54.051328 530.825915515423 2928816.75 9734.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 7.458436012268066 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9737 54.057 281.0 382630.0 25 0 74510.0 + 44312 YLNDGLWHM 9 97 574.7632248366486 1147.5118967400972 2 574.7634765505791 MULTI CID FTMS 0 0 0 9734 118148.1171875 0.6528198240891211 -3 0.1780738830566406 3 Unmodified _YLNDGLWHM_ ENSG00000101898|ENST00000394552|MCTS2;ENSG00000232119|ENST00000371317|MCTS1;ENST00000487133.1_1_X:119742243-119746116:+|nuORF;nc|ENSG00000232119|Q9ULC4-2|MCTS1;nc|ENSG00000232119|Q9ULC4-3|MCTS1 39.957323273325 0.0756908302845263 5 Y{I|L}NDG{I|L}WMH 9 2 + 82.855 0.0 0.0 7.2204 7.2204 87.997 0.0 0.0 0.0 58.66892307573134 10.24337189108141 10.24337189108141 3.979400086720375 0 0.7614393726401688 2.0 0.0 0.3807196863200844 Y{I|L}NDG{I|L}WMH;Y{I|L}NDG{I|L}MWH;Y{I|L}GGDG{I|L}WMH;Y{I|L}GGDG{I|L}MWH;Y{I|L}[R{M(Oxidation (M))|F}]WN{[{M(Oxidation (M))|F}C]|[YS]};Y{I|L}[C(Carbamidomethyl (C))M]S[KP]{[{M(Oxidation (M))|F}C]|[YS]};Y{I|L}[R{M(Oxidation (M))|F}]WGG{[{M(Oxidation (M))|F}C]|[YS]};Y{I|L}[C(Carbamidomethyl (C))M]VVN{[{M(Oxidation (M))|F}C]|[YS]};Y[YV]ND[KP]{[{M(Oxidation (M))|F}C]|[YS]} 7.2204;6.8736;6.0862;5.7394;3.4682;2.9573;2.6611;2.6105;0.88264 -;-;-;-;-;-;-;-;- 414 + 1 2.143 85009.1 1.0 5266 4469 9734 SUDHL4_400M_050219_1,9737 SUDHL4_400M_050219_1,9737,YLNDGLWHM True True YLNDGLWHM 54.056509 574.763476550579 1107644.25 9734.0 nc|ENSG00000232119|Q9ULC4-2|MCTS1;;ENSG00000101898|ENST00000394552|MCTS2;;ENST00000487133.1_1_X:119742243-119746116:+|nuORF;;ENSG00000232119|ENST00000371317|MCTS1;;nc|ENSG00000232119|Q9ULC4-3|MCTS1 7.862819035847981 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9738 54.064 431.0 68485.0 25 0 5454.5 -1 0 77 1085.992480456829 0 1085.992480456829 PEAK CID FTMS 0 0 0 -1 0 4 5 D 1 -1 3.4949 0.0 0.0 0.16106 0.0 0.0 1173.190514036902 878.7497042291624 2051.940218266064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.16106 - 4 + 1 2.143 26432.9 1.0 5267 4469 9734 SUDHL4_400M_050219_1,9738 SUDHL4_400M_050219_1,9738, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9739 54.078 800.0 117440.0 25 0 4654.7 -1 0 122 945.0631670866624 0 945.1798583865166 PEAK CID FTMS 0 0 0 -1 0 5 5 E 1 -1 5.3786 0.0 0.0 0.28487 0.0 0.0 1590.9420252360214 165.10349451236564 1756.045519748387 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 E 0.28487 - 30 + 1 2.143 62900.7 0.949999988079071 5268 4469 9734 SUDHL4_400M_050219_1,9739 SUDHL4_400M_050219_1,9739, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9741 54.083 138.0 638110.0 25 0 48383.0 + 17284 KLQEFLQTL 9 112 560.3241608380443 1118.6337687428886 2 560.3243896365166 MULTI CID FTMS 0 0 0 9740 475181.03125 0.5137131799528726 2 -0.0861167907714843 1 Unmodified _KLQEFLQTL_ ENSG00000140525|ENST00000310775|FANCI;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-4|FANCI 96.11092074494114 0.0124975504059861 5 [{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}QT{I|L} 10 3 + 77.202 0.0 0.0 6.9014 6.9014 88.296 0.0 0.0 0.0 4.800821617046935 1.1219583558280988 1.1219583558280988 4.800821617046935 0 1.048455006504028 1.5228787452803376 1.7104093769761874 1.25 [{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}QT{I|L};[AG]{I|L}KE{M(Oxidation (M))|F}{I|L}QT{I|L};[K{I|L}]{M(Oxidation (M))|F}EK{I|L}QT{I|L};[K{I|L}]QE{M(Oxidation (M))|F}{I|L}QT{I|L};[{I|L}T][CS]{I|L}K{I|L}QT{I|L};[AG]{I|L}{M(Oxidation (M))|F}EK{I|L}QT{I|L};[{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}[AG]T{I|L};[Q{I|L}]{M(Oxidation (M))|F}EK{I|L}QT{I|L};[Q{I|L}]KE{M(Oxidation (M))|F}{I|L}QT{I|L};[AG]{I|L}EK{M(Oxidation (M))|F}{I|L}QT{I|L} 6.9014;6.4723;6.4042;6.3779;6.2955;6.2078;6.0822;5.9146;5.8883;5.8714 -;-;-;+;-;-;-;-;-;- + 2500 1 2.143 70491.5 1.0 5269 4470 9740 SUDHL4_400M_050219_1,9741 SUDHL4_400M_050219_1,9741,KLQEFLQTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9742 54.092 486.0 104620.0 25 0 2031.0 -1 0 82 922.7689239604396 0 922.7075073122978 PEAK CID FTMS 0 0 0 -1 0 2 5 {I|L} 1 -1 3.9794 0.0 0.0 0.21586 0.0 0.0 1013.4810719425606 713.9363497369749 1727.4174216795354 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.21586 - 8 + 1 2.143 38030.7 1.0 5270 4470 9740 SUDHL4_400M_050219_1,9742 SUDHL4_400M_050219_1,9742, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9743 54.101 494.0 165160.0 25 0 34256.0 -1 0 85 964.9662315681874 1927.9179102031744 2 965.4677001833916 MULTI CID FTMS 0 0 0 9740 121567.28125 0.7585399907906337 2 -0.0861167907714843 3 5 {[{M(Oxidation (M))|F}D]|MM}NSQ{I|L}VC(Carbamidomethyl (C))[Y{I|L}][WR]Q{[TV]|[{I|L}S]} 15 -1 + 36.832 0.0 0.0 1.9104 1.9104 52.842 0.0 0.0 0.0 3.8008871492820617 3.8008871492820617 3.8008871492820617 0.0 0 0.0 0.0 0.4247425010840047 0.3252574989159953 {[{M(Oxidation (M))|F}D]|MM}NSQ{I|L}VC(Carbamidomethyl (C))[Y{I|L}][WR]Q{[TV]|[{I|L}S]};{[{M(Oxidation (M))|F}D]|MM}NSK{I|L}VC(Carbamidomethyl (C))[Y{I|L}][WR]Q{[TV]|[{I|L}S]};[NP]{I|L}N[H{I|L}][Y{I|L}]C(Carbamidomethyl (C))V{I|L}KSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}N[H{I|L}][Y{I|L}]C(Carbamidomethyl (C))V{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[QP]VN[H{I|L}][Y{I|L}]C(Carbamidomethyl (C))V{I|L}KSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[QP]VN[H{I|L}][Y{I|L}]C(Carbamidomethyl (C))V{I|L}QSN{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.9104;1.9104;1.7133;1.7133;1.3745;1.3745 -;-;-;-;-;- 532 + 1 2.143 59631.5 1.0 5271 4470 9740 SUDHL4_400M_050219_1,9743 SUDHL4_400M_050219_1,9743, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9744 54.114 760.0 330700.0 25 0 26999.0 + 1644 ALMPVLNQV 9 157 492.7810660155615 983.5475790979232 2 492.7808105349541 MULTI CID FTMS 0 0 0 9740 117627.1875 0.3755479715698311 -4 0.2196769714355468 4 Unmodified _ALMPVLNQV_ ENSG00000223496|ENST00000435634|EXOSC6 106.8454739257335 0.0073671968602159 5 [{I|L}A]M[VP]{I|L}NQV 9 0 + 60.886 0.0 0.0 6.1905 6.1905 86.105 0.0 0.0 0.0 20.33612834394972 4.471580313422187 4.471580313422187 4.471580313422187 0 1.4731975075880328 2.0 0.0 1.7614393726401687 + + [{I|L}A]M[VP]{I|L}NQV;[{I|L}A]M[VP]{I|L}NN{I|L};[{I|L}A]M[VP]{I|L}GGQV;[{I|L}A]M[VP]{I|L}NGAV;[{I|L}A]M[VP]{I|L}GGN{I|L};[{I|L}A]M[VP]{I|L}NGG{I|L};[{I|L}A][NP][KT]NQV;[{I|L}A][NP][KT]NN{I|L};[{I|L}A][NP]PV{M(Oxidation (M))|F}QV;[{I|L}A][NP][KT]NGAV 6.1905;5.7358;5.2542;5.1595;4.7996;4.7049;4.0871;3.6325;3.2189;3.0562 +;-;-;-;-;-;-;-;-;- + 2023 + 1 2.143 192676.0 1.0 5272 4470 9740 SUDHL4_400M_050219_1,9744 SUDHL4_400M_050219_1,9744,ALMPVLNQV True True ALMPVLNQV 54.113905 492.780810534954 4190988.0 9740.0 ENSG00000223496|ENST00000435634|EXOSC6 6.614883581797282 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9745 54.128 800.0 140610.0 25 0 23390.0 + 23754 LTYMPSVSL 9 111 1010.5210112456876 1009.5137347790876 1 1010.524279773235 MULTI CID FTMS 0 0 0 9740 74292.3125 0.4510269865401677 2 -0.0861167907714843 5 Unmodified _LTYMPSVSL_ ENSG00000122591|ENST00000432176|HYCC1;nc|ENSG00000122591|Q9BYI3-3|HYCC1 85.27202061508552 0.0162393975915471 5 [{I|L}T]YM[PS]VS{I|L} 9 0 + 46.005 0.0 0.0 4.5572 4.5572 82.937 0.0 0.0 0.0 6.567022752910297 8.446961220090024 6.567022752910297 6.567022752910297 0 1.6307196863200843 0.0 2.018930178484529 0.0 + + [{I|L}T]YM[PS]VS{I|L};[YT]{I|L}M[PS]VS{I|L};[PS]V[YV]{M(Oxidation (M))|F}VS{I|L};[PS]VSHH{M(Oxidation (M))|F}S{I|L};[PS]V{I|L}[YT]MS{I|L};[{I|L}T]Y[PA]{M(Oxidation (M))|F}VS{I|L};[PS]VMYPV{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}T]Y[WE]VS{I|L};[PS]VMY[{I|L}T]S{I|L};[YT]{I|L}[PA]{M(Oxidation (M))|F}VS{I|L} 4.5572;3.9067;3.8631;3.8604;3.7632;3.751;3.7204;3.7184;3.6926;3.1005 +;-;-;-;-;-;-;-;-;- + 2689 1 2.143 78192.8 0.9800000190734864 5273 4470 9740 SUDHL4_400M_050219_1,9745 SUDHL4_400M_050219_1,9745,LTYMPSVSL True True LTYMPSVSL 54.127769 1010.52427977323 1073149.75 9740.0 nc|ENSG00000122591|Q9BYI3-3|HYCC1;;ENSG00000122591|ENST00000432176|HYCC1 5.222891966501872 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9747 54.145 800.0 157240.0 25 0 5134.4 -1 0 122 1164.538481525006 3490.5936151752185 3 1165.199023425579 MULTI CID FTMS 0 0 0 9746 194577.28125 0.30889600540393 5 -0.1125640869140625 1 5 {I|L}VEY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 15 -1 47.177 0.0 0.0 1.3516 0.0 0.0 1746.786316446506 0.0 1746.786316446506 0.0 17.319845938712035 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VEY{M(Oxidation (M))|F}ANQQA[CS]V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 1.3516 - 3168 + 1 2.159 72221.1 0.7699999809265137 5274 4471 9746 SUDHL4_400M_050219_1,9747 SUDHL4_400M_050219_1,9747, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9748 54.159 800.0 216000.0 25 0 25639.0 + 31186 RLPPPFPGL 9 133 497.2979498578193 992.5813467824388 2 497.2981445193291 MULTI CID FTMS 0 0 0 9746 111159.8515625 0.6572319127582005 -13 0.5022430419921875 2 Unmodified _RLPPPFPGL_ ENSG00000028528|ENST00000559844|SNX1;nc|ENSG00000028528|Q13596-2|SNX1;nc|ENSG00000028528|Q13596-3|SNX1 57.47134341890925 0.0274820932774257 5 [R{I|L}]PPP{M(Oxidation (M))|F}PG{I|L} 9 0 + 60.252 0.0 0.0 6.0702 6.0702 92.256 0.0 0.0 0.0 18.039011023977032 28.64816633641979 18.039011023977032 14.282322625996912 0 1.9773473230428984 1.0 0.0 0.2396518287104437 + + [R{I|L}]PPP{M(Oxidation (M))|F}PG{I|L};[R{I|L}]YK{M(Oxidation (M))|F}PG{I|L};[R{I|L}]PM[{I|L}P]PG{I|L};[R{I|L}]PP[QA][QA]{I|L} 6.0702;4.6313;3.8228;2.8411 +;-;-;- + 427 1 2.159 130100.1 0.4099999964237213 5275 4471 9746 SUDHL4_400M_050219_1,9748 SUDHL4_400M_050219_1,9748,RLPPPFPGL True True RLPPPFPGL 54.159305 497.298144519329 5711228.5 9746.0 nc|ENSG00000028528|Q13596-2|SNX1;;nc|ENSG00000028528|Q13596-3|SNX1;;ENSG00000028528|ENST00000559844|SNX1 6.991092046101888 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9749 54.164 264.0 401310.0 25 0 15823.0 + 23138 LSPSLSSVK 9 130 917.5305374298624 916.5232609632624 1 918.5143920779228 MULTI CID FTMS 0 0 0 -1 0 3 Unmodified _LSPSLSSVK_ REV__ENSG00000183354|ENST00000399933|KIAA2026;REV__ENST00000540714.1_1_9:5919686-5933837:-|nuORF 15.847184025352805 0.4077185912009129 5 [{I|L}T]N[EP]{I|L}T 7 -1 29.542 0.0 0.0 3.2233 0.0 0.0 0.0 145.09598793067917 145.09598793067917 3.065979594196552 0.0 0.0 0.0 0 0.0 1.0457574905606752 1.305462187404089 0.0 [{I|L}T]N[EP]{I|L}T 3.2233 - 1521 1 2.159 70254.0 1.0 5276 4471 9746 SUDHL4_400M_050219_1,9749 SUDHL4_400M_050219_1,9749,LSPSLSSVK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9751 54.181 800.0 61810.0 25 0 15788.0 + -1 LWRRLLCLLRF 11 79 773.463547352488 1544.912541771776 2 773.9655639529228 MULTI CID FTMS 0 0 0 9750 47737.1875 0.6093718663701299 1 -0.0273361206054687 1 Carbamidomethyl (C) _LWRRLLC(Carbamidomethyl (C))LLRF_ REV__ENSG00000167733|ENST00000339423|HSD11B1L;REV__ENST00000578046.1_2_19:5687695-5687953:+|nuORF;REV__ENST00000581423.1_1_19:5687386-5687953:+|nuORF;REV__nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L;REV__nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L;REV__nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L 0.0 0.8751479354844584 5 H 1 -1 4.6041 0.0 0.0 0.29802 0.0 0.0 699.1191590586885 705.7005098932249 1404.8196689519134 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.29802 - 9 + 1 2.159 46318.8 0.3799999952316284 5277 4472 9750 SUDHL4_400M_050219_1,9751 SUDHL4_400M_050219_1,9751,LWRRLLCLLRF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9752 54.183 132.0 801640.0 25 0 119430.0 + 34050 SLLDLEQKL 9 130 529.8079972853582 1057.6014416375162 2 529.8082153201103 MULTI CID FTMS 0 0 0 9750 245285.1875 0.8069678379798266 -2 0.0861167907714843 2 Unmodified _SLLDLEQKL_ ENSG00000034693|ENST00000367591|PEX3 66.45667989310934 0.0225072657982126 5 {[TV]|[{I|L}S]}{I|L}D{I|L}EQK{I|L} 9 0 + 83.668 0.0 0.0 7.9111 7.9111 94.007 0.0 0.0 0.0 52.09137916201556 9.921525057367404 9.921525057367404 9.208187539523747 0 1.274227503252014 2.0 0.805462187404089 0.75 + + {[TV]|[{I|L}S]}{I|L}D{I|L}EQK{I|L};{[TV]|[{I|L}S]}{I|L}D{I|L}E[AG]K{I|L};{[TV]|[{I|L}S]}{I|L}GQ{NN|[MP]|[D{I|L}]|[EV]}S{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}GQ{[{M(Oxidation (M))|F}H]|[RQ]}RT;{[TV]|[{I|L}S]}{I|L}G[AG]{NN|[MP]|[D{I|L}]|[EV]}S{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}GQ[WR][KA];{[TV]|[{I|L}S]}{I|L}Q[R{M(Oxidation (M))|F}][VP]V;{NN|[MP]|[D{I|L}]|[EV]}EQ{I|L}KS{I|L}{I|L};{[TV]|[{I|L}S]}{I|L}G[AG]{[{M(Oxidation (M))|F}H]|[RQ]}RT;{[TV]|[{I|L}S]}{I|L}[WQ]W{I|L}{I|L} 7.9111;7.0405;4.9556;4.2024;4.0891;3.9643;3.6044;3.4801;3.3318;3.3011 +;-;-;-;-;-;-;-;-;- + 1571 + 1 2.159 84814.5 1.0 5278 4472 9750 SUDHL4_400M_050219_1,9752 SUDHL4_400M_050219_1,9752,SLLDLEQKL True True SLLDLEQKL 54.18325 529.80821532011 1226708.375 9750.0 ENSG00000034693|ENST00000367591|PEX3 5.058559735616048 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9753 54.189 300.0 362290.0 25 0 25861.0 + 1908 AMAEMVLQV 9 120 496.2510499794464 990.4875470256928 2 496.2516967654228 MULTI CID FTMS 0 0 0 9750 161411.890625 1.0 0 0.0 3 Unmodified _AMAEMVLQV_ ENSG00000010292|ENST00000315579|NCAPD2 50.855029805455786 0.0384952370514206 5 {[DS]|[MA]|[CV]|TT}EAMV 6 5 37.396 0.0 0.0 3.7755 0.0 0.0 0.0 355.19749891646217 355.19749891646217 11.250612633916996 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {[DS]|[MA]|[CV]|TT}EAMV 3.7755 - 774 1 2.159 86370.3 1.0 5279 4472 9750 SUDHL4_400M_050219_1,9753 SUDHL4_400M_050219_1,9753,AMAEMVLQV True True AMAEMVLQV 54.188736 496.251696765423 1506515.125 9750.0 ENSG00000010292|ENST00000315579|NCAPD2 5.93892780939738 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9754 54.192 135.0 774220.0 25 0 75530.0 + -1 VADPYVVIM 9 85 1006.5196613856892 0 1006.51964110136 PEAK CID FTMS 0 0 0 9750 462053.9375 0.7432352575705237 1 -0.0273361206054687 4 ENSG00000071894|ENST00000616140|CPSF1 5 MVADVV 6 -1 26.508 0.0 0.0 1.3181 0.0 0.0 1136.6140165196225 257.09395456323966 1393.707971082862 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 MVADVV 1.3181 - 916 + 1 2.159 75033.8 1.0 5280 4472 9750 SUDHL4_400M_050219_1,9754 SUDHL4_400M_050219_1,9754, False False VADPYVVIM 54.191504 1006.51964110136 887654.5 9750.0 ENSG00000071894|ENST00000616140|CPSF1 1.1294035762548449 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9757 54.202 220.0 414560.0 25 0 13948.0 44258 YLKQTEFP 8 95 1025.5304485449633 1024.5231720783634 1 1027.536669909954 MULTI CID FTMS 0 0 0 9756 573575.75 0.5599145010723058 4 -0.0919876098632812 1 Unmodified _YLKQTEFP_ ENST00000264852.8_2_3:113251393-113251462:+|nuORF 30.22481116460888 0.4082965392918993 5 [NG]VDVP[QT]VP 10 8 + 38.58 0.0 0.0 3.7656 3.7656 77.451 0.0 0.0 0.0 8.864784792805658 18.6680569455206 8.864784792805658 3.0102999566398125 0 0.0 0.0 0.6109243748081782 1.4802046884880935 [NG]VDVP[QT]VP;[NG]DVVP[QT]VP;[NG]VD{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[{I|L}T];[NG]VVDP[QT]VP;[NG]VDPV[QT]VP;[NG]DV{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[{I|L}T];[NG]DVPV[QT]VP;[Y{I|L}]DVQ[YK]P;[NG]VS{[WT]|[RM]}[HK]P;[NG]V[{M(Oxidation (M))|F}E]V{M(Oxidation (M))|F}[{I|L}T] 3.7656;3.4718;3.4143;3.3983;3.3064;3.1205;3.0125;2.5706;2.1735;1.8543 -;-;-;-;-;-;-;-;-;- 2103 1 2.159 63619.9 1.0 5281 4474 9756 SUDHL4_400M_050219_1,9757 SUDHL4_400M_050219_1,9757,YLKQTEFP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9758 54.209 371.0 80416.0 25 0 2134.8 -1 0 75 1155.1184034051587 0 1155.259326159954 PEAK CID FTMS 0 0 0 9756 43335.625 1.0 0 0.0 2 5 C(Carbamidomethyl (C)) 1 -1 1.5938 0.0 0.0 0.069049 0.0 0.0 1526.68619538278 618.4972628229124 2145.183458205692 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.069049 - 2 + 1 2.159 24627.1 1.0 5282 4474 9756 SUDHL4_400M_050219_1,9758 SUDHL4_400M_050219_1,9758, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9759 54.223 800.0 71487.0 25 0 15272.0 + 25870 NLFKHLAKRRT 11 78 692.4192852985503 1382.8240176639006 2 692.4202758669853 MULTI CID FTMS 0 0 0 9756 83031.8671875 0.9878260728935496 -4 0.1173248291015625 3 Unmodified _NLFKHLAKRRT_ REV__ENSG00000162627|ENST00000306121|SNX7;REV__nc|ENSG00000162627|Q9UNH6-2|SNX7;REV__nc|ENSG00000162627|Q9UNH6|SNX7 1.1933415558491238 0.8695176722560516 5 P 1 -1 3.0989 0.0 0.0 0.2241 0.0 0.0 1162.6927901021802 120.05091272525624 1282.7437028274364 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.2241 - 5 + 1 2.159 53168.8 0.4000000059604645 5283 4474 9756 SUDHL4_400M_050219_1,9759 SUDHL4_400M_050219_1,9759,NLFKHLAKRRT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9761 54.24 800.0 122260.0 25 0 7837.2 19085 LDRQRPKVQA 10 119 605.8557385267492 1209.6969241202985 2 605.8564330935478 MULTI CID FTMS 0 0 0 9760 93737.3828125 0.0019336454126787 25 -0.6422920227050781 1 Unmodified _LDRQRPKVQA_ ENST00000475614.6_1_1:42929358-42929523:+|nuORF 24.020572477871973 0.4289996903560794 5 [TP]AAVD{I|L}{I|L}{I|L} 9 10 47.358 0.0 0.0 3.9148 0.0 0.0 0.0 313.1501572299247 313.1501572299247 12.743340298552384 0.0 0.0 0.0 0 0.3054621874040891 1.2218487496163564 1.5743923658886183 0.0 [TP]AAVD{I|L}{I|L}{I|L} 3.9148 - 1857 1 2.159 73789.9 0.4099999964237213 5284 4475 9760 SUDHL4_400M_050219_1,9761 SUDHL4_400M_050219_1,9761,LDRQRPKVQA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9764 54.26 750.0 210490.0 25 0 21883.0 + 9203 FGGVLILIHR 10 124 375.56933832341485 1123.6861855704446 3 375.5691711306572 MULTI CID FTMS 0 0 0 9763 37146.5625 0.0041286913249223 21 -0.5728340148925781 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 46.020951573049366 0.1035046897853725 5 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 92.169 0.0 0.0 8.2024 8.2024 94.395 0.0 0.0 0.0 81.20039646275808 20.4241650017118 20.4241650017118 9.208187539523747 0 1.1307196863200843 2.0 0.0 0.9258337024346172 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 8.2024;7.383 -;- 141 + 1 2.159 126160.2 1.0 5285 4477 9763 SUDHL4_400M_050219_1,9764 SUDHL4_400M_050219_1,9764,FGGVLILIHR True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9765 54.274 800.0 74266.0 25 0 14509.0 + 43419 WRLQLRRVKE 10 82 461.9484767355037 1382.823600806711 3 461.9482299685478 MULTI CID FTMS 0 0 0 9763 90906.265625 0.9100422313956382 -1 0.0038871765136718 2 Unmodified _WRLQLRRVKE_ REV__ENSG00000112511|ENST00000374516|PHF1;REV__nc|ENSG00000112511|O43189-2|PHF1 0.4007161486938917 0.7247829448918255 5 P 1 -1 0.9691 0.0 0.0 0.070081 0.0 0.0 1184.7053279569047 98.0379885309203 1282.743316487825 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.070081 - 1 + 1 2.159 58695.4 0.4300000071525574 5286 4477 9763 SUDHL4_400M_050219_1,9765 SUDHL4_400M_050219_1,9765,WRLQLRRVKE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9766 54.287 800.0 44713.0 25 0 1052.7 -1 0 74 1166.6401025852333 0 1166.641284167767 PEAK CID FTMS 0 0 0 9763 122946.640625 1.0 0 0.0 3 5 C 1 -1 2.7642 0.0 0.0 0.11857 0.0 0.0 1421.6916298757417 803.5438853742687 2225.2355152500104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.11857 - 3 + 1 2.159 28671.5 0.6100000143051147 5287 4477 9763 SUDHL4_400M_050219_1,9766 SUDHL4_400M_050219_1,9766, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9768 54.298 392.0 66675.0 25 0 4617.0 -1 0 63 1110.0044467836883 2217.9943406341768 2 1111.126757800579 MULTI CID FTMS 0 0 0 9767 80037.296875 0.9575186923548412 3 -0.1665153503417968 1 5 M[NP] 3 -1 10.458 0.0 0.0 0.47149 0.0 0.0 1857.846557286324 0.0 1857.846557286324 0.0 9.488474775526187 0.0 0.0 0 0.0 0.0 0.0 0.0 M[NP] 0.47149 - 7 + 1 2.177 23887.0 1.0 5288 4478 9767 SUDHL4_400M_050219_1,9768 SUDHL4_400M_050219_1,9768, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9769 54.312 800.0 231720.0 25 0 24162.0 + 34282 SLQSTILGV 9 126 459.2686077694498 916.5226626056996 2 459.2686340212822 MULTI CID FTMS 0 0 0 9767 197984.65625 0.9842014569205668 -1 0.0431671142578125 2 Unmodified _SLQSTILGV_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 46.020951573049366 0.0490941689151868 5 {[TV]|[{I|L}S]}[NP]S{I|L} 6 6 32.923 0.0 0.0 3.5922 0.0 0.0 0.0 302.17023805969603 302.17023805969603 9.634928107446186 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.4049471895720984 0.0 {[TV]|[{I|L}S]}[NP]S{I|L} 3.5922 - 928 1 2.177 144017.0 0.5899999737739563 5289 4478 9767 SUDHL4_400M_050219_1,9769 SUDHL4_400M_050219_1,9769,SLQSTILGV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9770 54.326 800.0 65275.0 25 0 14381.0 38090 TPKKLMFRRLK 11 83 709.445371392373 1416.876189851546 2 709.4462158083916 MULTI CID FTMS 0 0 0 9767 110877.546875 0.8694915343538678 -1 0.0431671142578125 3 Unmodified _TPKKLMFRRLK_ ENSG00000181555|ENST00000409792|SETD2;ENST00000431180.5_1_3:47122459-47155398:-|nuORF 1.1933415558491238 0.8695176722560516 5 C(Carbamidomethyl (C)) 1 11 3.9794 0.0 0.0 0.28086 0.0 0.0 485.4719062595521 768.3645113580686 1253.8364176176208 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.28086 - 7 + 1 2.177 49358.8 0.4099999964237213 5290 4478 9767 SUDHL4_400M_050219_1,9770 SUDHL4_400M_050219_1,9770,TPKKLMFRRLK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9771 54.34 800.0 120240.0 25 0 11795.0 + 17416 KMVSIQITL 9 103 516.8096402006206 1031.6047274680411 2 516.8099243044853 MULTI CID FTMS 0 0 0 9767 82948.875 1.0 0 0.0 4 Unmodified _KMVSIQITL_ ENSG00000132842|ENST00000255194|AP3B1;nc|ENSG00000132842|O00203-3|AP3B1 39.94969957227396 0.0757326808254658 5 [{I|L}T][KC]{I|L}Q{I|L}T{I|L} 9 4 + 60.709 0.0 0.0 5.8849 5.8849 87.496 0.0 0.0 0.0 14.688417238364302 26.65423722065668 14.688417238364302 7.597046968434142 0 0.7429928190999391 2.0 1.066901560044258 0.4247425010840047 [{I|L}T][KC]{I|L}Q{I|L}T{I|L};[{I|L}T]Q{I|L}[KC]{I|L}T{I|L};[{I|L}T][KC]{I|L}[AG]{I|L}T{I|L};[{I|L}T][AG]{I|L}[KC]{I|L}T{I|L};[{I|L}T][KC]A{[VA]|[{I|L}G]}{I|L}T{I|L};[Q{I|L}]T{I|L}[KC]{I|L}T{I|L};[VP]{M(Oxidation (M))|F}[KS]Q{I|L}T{I|L};[{I|L}T][HV][HV]{I|L}T{I|L};[VP]{M(Oxidation (M))|F}[KS][AG]{I|L}T{I|L};[AG]{I|L}T{I|L}[KC]{I|L}T{I|L} 5.8849;5.1485;4.9923;3.9406;3.8689;3.8511;3.7884;3.2865;2.8957;2.863 -;-;-;-;-;-;-;-;-;- 650 1 2.177 75688.9 0.3400000035762787 5291 4478 9767 SUDHL4_400M_050219_1,9771 SUDHL4_400M_050219_1,9771,KMVSIQITL True True KMVSIQITL 54.339778 516.809924304485 453964.46875 9767.0 ENSG00000132842|ENST00000255194|AP3B1;;nc|ENSG00000132842|O00203-3|AP3B1 2.611404279867808 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9772 54.354 800.0 49247.0 25 0 15600.0 + 23943 LVRFALQRWVL 11 55 700.9327020426002 1399.8508511520004 2 700.9325439333916 MULTI CID FTMS 0 0 0 9767 81707.140625 0.9950840052056188 -1 0.0431671142578125 5 Unmodified _LVRFALQRWVL_ REV__ENST00000255764.3_1_5:6372352-6372490:-|nuORF 1.1933415558491238 0.8695176722560516 5 {M(Oxidation (M))|F} 1 -1 3.4949 0.0 0.0 0.24966 0.0 0.0 1014.6358070619598 235.1188601129516 1249.7546671749114 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.24966 + + 5 + 1 2.177 41774.3 0.3499999940395355 5292 4478 9767 SUDHL4_400M_050219_1,9772 SUDHL4_400M_050219_1,9772,LVRFALQRWVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9774 54.369 766.0 173070.0 25 0 4001.9 -1 0 124 932.4933445815286 0 932.480029284954 PEAK CID FTMS 0 0 0 9773 68546.0546875 1.0 0 0.0 1 5 {I|L}ET{I|L}EAG 7 -1 36.636 0.0 0.0 1.9665 0.0 0.0 949.4884804768856 197.0942324274047 1146.5827129042902 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6237125054200234 0.0 {I|L}ET{I|L}EAG 1.9665 - 1153 + 1 2.177 85426.8 1.0 5293 4479 9773 SUDHL4_400M_050219_1,9774 SUDHL4_400M_050219_1,9774, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9775 54.383 778.0 317670.0 25 0 79376.0 + 37389 TLADVLYHV 9 142 515.7816842372094 1029.5488155412188 2 515.7820922732353 MULTI CID FTMS 0 0 0 9773 116813.3046875 0.6408108773211342 -5 0.1581077575683593 2 Unmodified _TLADVLYHV_ ENSG00000129691|ENST00000343823|ASH2L;ENST00000520079.1_1_8:37996261-37996586:+|nuORF;nc|ENSG00000129691|Q9UBL3-2|ASH2L;nc|ENSG00000129691|Q9UBL3-3|ASH2L 53.57557251787612 0.0325303259649373 5 [{I|L}T]ADV{I|L}YVH 9 2 + 74.764 0.0 0.0 7.2619 7.2619 89.48 0.0 0.0 0.0 26.506623442795693 5.642714304385635 5.642714304385635 5.642714304385635 0 0.6694451763165201 2.0 0.4247425010840047 0.0 [{I|L}T]ADV{I|L}YVH;[{I|L}T]ADV{I|L}YHV;[{I|L}T]EGV{I|L}YVH;[{I|L}T]ADV{I|L}VYH;[{I|L}T]AD{I|L}VYVH;[{I|L}T]EGV{I|L}YHV;[{I|L}T]AD{I|L}VYHV;[{I|L}T]EGV{I|L}VYH;[{I|L}T]VGE{I|L}YVH;[{I|L}T]EG{I|L}VYVH 7.2619;6.7138;6.5949;6.441;6.335;6.0468;5.7869;5.7741;5.7449;5.668 -;+;-;-;-;-;-;-;-;- + 1515 + 1 2.177 187898.3 1.0 5294 4479 9773 SUDHL4_400M_050219_1,9775 SUDHL4_400M_050219_1,9775,TLADVLYHV True True TLADVLYHV 54.38277 515.782092273235 1052263.75 9773.0 ENSG00000129691|ENST00000343823|ASH2L;;ENST00000520079.1_1_8:37996261-37996586:+|nuORF;;nc|ENSG00000129691|Q9UBL3-3|ASH2L;;nc|ENSG00000129691|Q9UBL3-2|ASH2L 7.441926638285319 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9776 54.397 800.0 73842.0 25 0 8845.2 -1 0 85 1110.0044467836883 2217.9943406341768 2 1110.502490222454 MULTI CID FTMS 0 0 0 9773 182482.765625 1.0 0 0.0 3 5 M[NP] 3 -1 14.265 0.0 0.0 0.64314 0.0 0.0 1857.846728057361 0.0 1857.846728057361 0.0 1.588709367037282 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 M[NP] 0.64314 - 46 + 1 2.177 42446.6 0.6100000143051147 5295 4479 9773 SUDHL4_400M_050219_1,9776 SUDHL4_400M_050219_1,9776, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9777 54.41 800.0 161840.0 25 0 18087.0 38009 TPAARRGPV 9 129 924.5412007485904 923.5339242819904 1 924.5468627810478 MULTI CID FTMS 0 0 0 9773 121070.1328125 1.0 0 0.0 4 Unmodified _TPAARRGPV_ ENST00000265351.11_1_6:43543606-43543798:-|nuORF 20.453626601364224 0.2830276176381075 5 [TP]AAV[KP]AAV 10 5 + 59.136 0.0 0.0 6.4032 6.4032 93.893 0.0 0.0 0.0 4.604546065625428 22.69585969540585 4.604546065625428 21.945830421822663 0 0.3252574989159953 0.6989700043360187 2.1549471895720984 0.0 [TP]AAV[KP]AAV;[PA]TAV[KP]AAV;[TP][Q{I|L}][KP]AAV;[QP][K{I|L}]PTAAV;[PG]RRPTAAV;{[HG]|PP}GRRTAAV;[PG]PRRTAAV;[PG]PA[K{I|L}]TAAV;{[HG]|PP}GA[K{I|L}]TAAV;[PG]A[K{I|L}]PTAAV 6.4032;4.0269;3.7713;3.6084;3.5635;3.3481;3.3481;3.2128;3.2128;3.188 -;-;-;-;-;-;-;-;-;- 337 1 2.177 86600.2 0.9700000286102296 5296 4479 9773 SUDHL4_400M_050219_1,9777 SUDHL4_400M_050219_1,9777,TPAARRGPV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9778 54.419 468.0 90244.0 25 0 1612.9 -1 0 82 1162.6529422341373 0 1162.802661120892 PEAK CID FTMS 0 0 0 9773 52154.3828125 1.0 0 0.0 5 5 R 1 -1 4.6041 0.0 0.0 0.19817 0.0 0.0 1077.240014251675 1086.9260958307252 2164.1661100824 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.19817 - 3 + 1 2.177 32196.3 1.0 5297 4479 9773 SUDHL4_400M_050219_1,9778 SUDHL4_400M_050219_1,9778, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9780 54.436 800.0 142610.0 25 0 10134.0 + 1645 ALMPVLNQV 9 125 492.7810660155615 983.5475790979232 2 492.7823058962822 MULTI CID FTMS 0 0 0 9779 70423.7421875 0.2248416721591032 6 -0.194671630859375 1 Unmodified _ALMPVLNQV_ ENSG00000223496|ENST00000435634|EXOSC6 86.12129899796855 0.0160336270647063 5 [{I|L}A][KQ]MP{M(Oxidation (M))|F} 7 7 44.239 0.0 0.0 4.4979 0.0 0.0 0.0 165.10468293997306 165.10468293997306 0.4874164567239347 0.0 0.0 0.0 0 1.1237125054200234 1.6989700043360187 0.0 1.25 [{I|L}A][KQ]MP{M(Oxidation (M))|F} 4.4979 - 1250 1 2.199 92816.7 0.4699999988079071 5298 4480 9779 SUDHL4_400M_050219_1,9780 SUDHL4_400M_050219_1,9780,ALMPVLNQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9781 54.44 200.0 379950.0 25 0 11839.0 + 37384 TLADISALV 9 128 902.5154450773272 901.508168610727 1 902.5139648318292 MULTI CID FTMS 0 0 0 9779 125920.453125 0.4810165243188263 6 -0.194671630859375 2 Unmodified _TLADISALV_ REV__ENSG00000116882|ENST00000325945|HAO2;REV__nc|ENSG00000116882|Q9NYQ3-2|HAO2 34.10243960390752 0.1078313939113124 5 [{I|L}T]AVSVVDV 9 -1 + 70.843 0.0 0.0 7.8583 7.8583 87.513 0.0 0.0 0.0 26.905367682672363 37.06940025382677 26.905367682672363 2.703489857067396 0 0.0 1.3010299956639813 2.4802046884880937 0.0 [{I|L}T]AVSVVDV;[{I|L}T]AVSEA{I|L}V;[{I|L}T]ASVVVDV;[{I|L}T]ASVEA{I|L}V;[{I|L}T]ASD{I|L}A{I|L}V;[{I|L}T]A[PA]{M(Oxidation (M))|F}A{I|L}V;[{I|L}T]A[TA]{I|L}VDV;[{I|L}T]A[PA]VVTM;[{I|L}T]AVST{I|L}[TP];[{I|L}T]AV[PA]VTM 7.8583;7.5584;7.2188;6.9189;6.4527;5.954;5.1119;4.9238;4.7237;4.5616 -;-;-;-;-;-;-;-;-;- 1132 1 2.199 51836.3 1.0 5299 4480 9779 SUDHL4_400M_050219_1,9781 SUDHL4_400M_050219_1,9781,TLADISALV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9782 54.454 800.0 194290.0 25 0 31472.0 + 31187 RLPPPFPGL 9 108 497.2979498578193 992.5813467824388 2 497.2970458865166 MULTI CID FTMS 0 0 0 9779 98230.1484375 0.5807851255702785 -4 0.1782684326171875 3 Unmodified _RLPPPFPGL_ ENSG00000028528|ENST00000559844|SNX1;nc|ENSG00000028528|Q13596-2|SNX1;nc|ENSG00000028528|Q13596-3|SNX1 67.34385681178166 0.0221257235307089 5 [R{I|L}]PPP{M(Oxidation (M))|F}PG{I|L} 9 0 + 64.772 0.0 0.0 6.5256 6.5256 89.634 0.0 0.0 0.0 20.360980233036152 42.58079210562758 20.360980233036152 8.381007699735818 0 2.159379381312206 1.2218487496163564 0.0 0.25 + + [R{I|L}]PPP{M(Oxidation (M))|F}PG{I|L};[R{I|L}]PM[{I|L}P]PG{I|L};[R{I|L}][YK]{M(Oxidation (M))|F}PG{I|L};[R{I|L}]PP[QA][QA]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NR[{I|L}P]PG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NP[R{I|L}]PG{I|L} 6.5256;5.6813;4.8326;3.2237;2.2239;1.7432 +;-;-;-;-;- + 343 1 2.199 120558.6 0.949999988079071 5300 4480 9779 SUDHL4_400M_050219_1,9782 SUDHL4_400M_050219_1,9782,RLPPPFPGL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9785 54.474 800.0 59017.0 25 0 1139.2 -1 0 97 1145.4980882067846 0 1145.818164050579 PEAK CID FTMS 0 0 0 -1 0 1 5 D 1 -1 3.9794 0.0 0.0 0.17385 0.0 0.0 2015.8696067340784 155.0621279352172 2170.931734669296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.17385 - 9 + 1 2.199 36553.1 0.6000000238418579 5301 4482 9784 SUDHL4_400M_050219_1,9785 SUDHL4_400M_050219_1,9785, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9786 54.488 800.0 204980.0 25 0 19123.0 + 30688 RFPPTPPLF 9 127 536.3027649313822 1070.5909769295642 2 536.3031494021416 MULTI CID FTMS 0 0 0 9784 95378.328125 0.5383035845146821 -2 0.0391006469726562 2 Unmodified _RFPPTPPLF_ chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A;ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A 68.08070601005525 0.0218408846571049 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[TP]PP{I|L}{M(Oxidation (M))|F} 9 2 + 51.333 0.0 0.0 4.7949 4.7949 81.459 0.0 0.0 0.0 3.9646872391696064 10.076024406964592 3.9646872391696064 3.9646872391696064 0 1.548455006504028 1.5228787452803376 0.9247425010840048 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[TP]PP{I|L}{M(Oxidation (M))|F};[{I|L}P]PH[PG]PP{I|L}{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]P[TP]PP{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PP{I|L}{M(Oxidation (M))|F};[{I|L}P]W[W{I|L}]P{I|L}{M(Oxidation (M))|F};{[HG]|PP}{I|L}H[PG]PP{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PP{M(Oxidation (M))|F}{I|L};[W{I|L}][W{I|L}]PP{I|L}{M(Oxidation (M))|F};[W{I|L}]P[W{I|L}]P{I|L}{M(Oxidation (M))|F};[{I|L}P][YV]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[HS] 4.7949;4.4245;4.0633;3.8537;3.1879;2.7011;2.4526;2.3492;1.601;1.5293 -;-;+;-;-;-;-;-;-;- + 529 1 2.199 138427.4 0.4300000071525574 5302 4482 9784 SUDHL4_400M_050219_1,9786 SUDHL4_400M_050219_1,9786,RFPPTPPLF True True RFPPTPPLF 54.487913 536.303149402142 1318211.25 9784.0 nc|ENSG00000119866|Q9H165-6|BCL11A;;nc|ENSG00000119866|Q9H165-2|BCL11A;;ENSG00000119866|ENST00000642384|BCL11A;;chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A 7.036156177520752 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9787 54.502 800.0 109710.0 25 0 1798.0 -1 0 124 1145.4980882067846 0 1145.731616199017 PEAK CID FTMS 0 0 0 -1 0 3 5 YD 2 -1 7.58 0.0 0.0 0.33115 0.0 0.0 1144.4508140094692 863.4044893854124 2007.8553033948813 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 YD 0.33115 - 20 + 1 2.199 55685.2 0.5199999809265137 5303 4482 9784 SUDHL4_400M_050219_1,9787 SUDHL4_400M_050219_1,9787, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9788 54.509 425.0 113650.0 25 0 13756.0 -1 0 89 973.9717428385328 1945.9289327438653 2 974.4728881716728 MULTI CID FTMS 0 0 0 9784 76739.0234375 0.5540050582752976 3 -0.0969047546386718 4 5 [Q{I|L}]SQVMRM 8 -1 15.961 0.0 0.0 0.82024 0.0 0.0 0.0 969.4713271132596 969.4713271132596 4.7464663559180735 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [Q{I|L}]SQVMRM 0.82024 - 803 1 2.199 39600.4 1.0 5304 4482 9784 SUDHL4_400M_050219_1,9788 SUDHL4_400M_050219_1,9788, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9791 54.53 800.0 103100.0 25 0 17604.0 10713 FWKRILREWKK 11 117 530.6532992437246 1588.938068331374 3 530.6534911990166 MULTI CID FTMS 0 0 0 9790 110305.1796875 1.0 0 0.0 1 Unmodified _FWKRILREWKK_ ENST00000367669.7_2_1:176104215-176105655:-|nuORF 0.0732635311334299 0.8748022733701193 5 {[TV]|[{I|L}S]}{[VA]|[{I|L}G]}V{M(Oxidation (M))|F}E{I|L} 8 9 18.082 0.0 0.0 1.138 0.0 0.0 0.0 727.4231506890488 727.4231506890488 6.299400906608938 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}{[VA]|[{I|L}G]}V{M(Oxidation (M))|F}E{I|L} 1.138 - 729 1 2.199 73271.4 0.8799999952316284 5305 4484 9790 SUDHL4_400M_050219_1,9791 SUDHL4_400M_050219_1,9791,FWKRILREWKK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9792 54.541 659.0 236310.0 25 0 19941.0 + -1 RLLEVPVML 9 127 543.3235167940164 0 543.3233520388603 PEAK CID FTMS 0 0 0 9790 150288.40625 1.0 0 0.0 2 Oxidation (M) _RLLEVPVM(Oxidation (M))L_ ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2 26.268140514670165 0.1442484609216422 5 {I|L}TVPVT[VP]E 9 -1 46.565 0.0 0.0 4.2931 0.0 0.0 63.99794397550233 82.0669420831664 146.06488605866872 0.0 0.0 0.0 0.0 0 1.1989700043360187 0.0 0.7742275032520141 0.0 {I|L}TVPVT[VP]E 4.2931 - 211 + 1 2.199 124707.8 1.0 5306 4484 9790 SUDHL4_400M_050219_1,9792 SUDHL4_400M_050219_1,9792,RLLEVPVML False False RLLEVPVML 54.54129 543.32335203886 745929.8125 9790.0 ENST00000591718.1_1_19:55966993-55972941:-|nuORF;;ENSG00000063241|ENST00000425675|ISOC2;;nc|ENSG00000063241|Q96AB3-2|ISOC2 2.0246412555376687 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9793 54.555 800.0 131570.0 25 0 28435.0 -1 LRRRPRVYYRI 11 140 795.478155909062 1588.941758884924 2 795.4775878787041 MULTI CID FTMS 0 0 0 9790 101419.359375 1.0 0 0.0 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LRRRPRVYYRI_ ENST00000254190.3_1_15:101718013-101718115:-|nuORF 0.0 0.8751479354844584 5 A 1 -1 5.4846 0.0 0.0 0.34517 0.0 0.0 995.7453610351178 519.1449679010374 1514.8903289361551 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.34517 - 112 + 1 2.199 76681.1 0.4300000071525574 5307 4484 9790 SUDHL4_400M_050219_1,9793 SUDHL4_400M_050219_1,9793,LRRRPRVYYRI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9795 54.571 800.0 55360.0 25 0 5585.5 + 21953 LPPLPEAPLA 10 78 509.30269393795874 0 509.3032104372978 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _LPPLPEAPLA_ REV__ENSG00000205436|ENST00000688303|EXOC3L4 21.74664581756881 0.2842027874392456 5 P{I|L}K 3 -1 19.693 0.0 0.0 1.9371 0.0 0.0 202.12307478822373 473.2061251276001 675.3291999158238 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 P{I|L}K 1.9371 - 17 + 1 2.199 44645.5 0.3199999928474426 5308 4485 9794 SUDHL4_400M_050219_1,9795 SUDHL4_400M_050219_1,9795,LPPLPEAPLA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9796 54.578 366.0 346760.0 25 0 19340.0 + 40781 VLLGGVASL 9 118 828.5191394938311 827.511863027231 1 828.5198242068291 MULTI CID FTMS 0 0 0 9794 280906.28125 1.0 0 0.0 2 Unmodified _VLLGGVASL_ ENSG00000112514|ENST00000488034|CUTA 85.35673624503755 0.0162188719545379 5 [{I|L}V]N{I|L}VAS{I|L} 8 3 + 67.28 0.0 0.0 8.1304 8.1304 90.734 0.0 0.0 0.0 6.989700043360195 39.3815861802434 6.989700043360195 5.406818243744255 0 1.4143943297944483 0.0 0.5 0.0 [{I|L}V]N{I|L}VAS{I|L};[{I|L}V]NV{I|L}AS{I|L};[{I|L}V]{I|L}NVAS{I|L};[{I|L}V]N{I|L}G{I|L}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}VAS{I|L};[{I|L}V]GG{I|L}VAS{I|L};[{I|L}V]N{I|L}AVS{I|L};[{I|L}V]NVA{I|L}S{I|L};[{I|L}V]{I|L}NG{I|L}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VV{I|L}AS{I|L} 8.1304;7.477;7.3703;7.1608;7.0406;7.0111;7.0098;6.5074;6.4007;6.3872 -;-;-;-;-;-;-;-;-;- 1695 1 2.199 85923.4 1.0 5309 4485 9794 SUDHL4_400M_050219_1,9796 SUDHL4_400M_050219_1,9796,VLLGGVASL True True VLLGGVASL 54.577548 828.519824206829 1036715.125 9794.0 ENSG00000112514|ENST00000488034|CUTA 6.477595488230388 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9797 54.584 337.0 34641.0 25 0 1876.6 -1 0 34 1003.9332376430156 0 1004.058276355267 PEAK CID FTMS 0 0 0 -1 0 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.199 19882.4 1.0 5310 4485 9794 SUDHL4_400M_050219_1,9797 SUDHL4_400M_050219_1,9797, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9798 54.587 194.0 185930.0 25 0 10230.0 -1 0 88 887.6812286601051 0 887.7722045779228 PEAK CID FTMS 0 0 0 9794 57255.4609375 1.0 0 0.0 4 5 C[CS]EAVVY 8 -1 20.126 0.0 0.0 1.1349 0.0 0.0 724.8737355411102 191.0832003229125 915.9569358640229 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C[CS]EAVVY 1.1349 - 125 + 1 2.199 28187.4 1.0 5311 4485 9794 SUDHL4_400M_050219_1,9798 SUDHL4_400M_050219_1,9798, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9799 54.592 240.0 51461.0 25 0 3430.2 -1 0 35 1104.790232418828 0 1104.449633777142 PEAK CID FTMS 0 0 0 9794 151592.21875 1.0 0 0.0 5 5 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.20856 0.0 0.0 826.1159129804313 1231.3444307916627 2057.460343772094 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20856 - 1 + 1 2.199 18680.2 1.0 5312 4485 9794 SUDHL4_400M_050219_1,9799 SUDHL4_400M_050219_1,9799, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9800 54.6 423.0 119750.0 25 0 3723.3 31722 RRRRRRRGRPW 11 76 804.4941644797012 0 804.4954101443291 PEAK CID FTMS 0 0 0 9794 142790.6875 1.0 0 0.0 6 Unmodified _RRRRRRRGRPW_ ENST00000229416.10_1_6:53409415-53409676:-|nuORF 0.3070304955306653 0.4761840153648598 5 H 1 11 3.0989 0.0 0.0 0.19284 0.0 0.0 501.39682397717735 965.5218599908812 1466.9186839680583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.19284 - 5 + 1 2.199 41568.0 1.0 5313 4485 9794 SUDHL4_400M_050219_1,9800 SUDHL4_400M_050219_1,9800,RRRRRRRGRPW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9801 54.613 800.0 56896.0 25 0 3359.1 -1 0 98 779.6664306521416 0 779.6664306521416 PEAK CID FTMS 0 0 0 -1 0 7 5 EG{M(Oxidation (M))|F}E 4 -1 11.402 0.0 0.0 0.73217 0.0 0.0 867.0143665759643 225.0885408990844 1092.1029074750488 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EG{M(Oxidation (M))|F}E 0.73217 - 72 + 1 2.199 38228.3 0.5400000214576721 5314 4485 9794 SUDHL4_400M_050219_1,9801 SUDHL4_400M_050219_1,9801, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9803 54.631 800.0 48807.0 25 0 4504.2 + 23845 LVHFRLKRG 9 76 563.3524047732353 0 563.3524047732353 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _LVHFRLKRG_ REV__ENSG00000275700|ENST00000619387|AATF 7.910154910731844 0.3362437653303669 5 {M(Oxidation (M))|F}D{I|L} 3 -1 15.49 0.0 0.0 1.3772 0.0 0.0 212.15696845511303 534.3169424502718 746.4739109053849 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F}D{I|L} 1.3772 - 17 + 1 2.213 36111.5 0.4199999868869781 5315 4486 9802 SUDHL4_400M_050219_1,9803 SUDHL4_400M_050219_1,9803,LVHFRLKRG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9806 54.641 225.0 424020.0 25 0 30792.0 + 34283 SLQSTILGV 9 112 917.5305374298624 916.5232609632624 1 917.5309936404228 MULTI CID FTMS 0 0 0 9805 312505.46875 0.1336306518763286 9 -0.1783943176269531 1 Unmodified _SLQSTILGV_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 38.17557092003332 0.0854718145212029 5 {[TV]|[{I|L}S]}QST{I|L}{I|L}[VG] 9 0 + 54.835 0.0 0.0 5.9829 5.9829 88.252 0.0 0.0 0.0 8.696662315049934 7.606442888633254 7.606442888633254 8.309159218443796 0 0.3252574989159953 1.0969100130080565 1.7302046884880935 0.0 + + {[TV]|[{I|L}S]}QST{I|L}{I|L}[VG];{[TV]|[{I|L}S]}Q{I|L}TS{I|L}[VG];{[TV]|[{I|L}S]}[AG]ST{I|L}{I|L}[VG];{[TV]|[{I|L}S]}[C(Carbamidomethyl (C))R]{I|L}{I|L}R;{[QS]|[NT]}{I|L}ST{I|L}{I|L}[VG];{[TV]|[{I|L}S]}[AG]{I|L}TS{I|L}[VG];[Q{I|L}]SST{I|L}{I|L}[VG];{[TV]|[{I|L}S]}[WR]S{I|L}R;{[QS]|[NT]}{I|L}{I|L}TS{I|L}[VG];{[TV]|[{I|L}S]}[{I|L}T]QS{I|L}[VG] 5.9829;5.0763;4.9782;4.654;4.5988;4.0716;4.0234;3.9986;3.6922;3.4818 +;-;-;-;-;-;-;-;-;- + 808 1 2.213 63978.1 1.0 5316 4488 9805 SUDHL4_400M_050219_1,9806 SUDHL4_400M_050219_1,9806,SLQSTILGV True True SLQSTILGV 54.641489 917.530993640423 12361197.0 9805.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 2.654305562376976 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9807 54.652 587.0 131770.0 25 0 7334.6 -1 0 135 930.730626143426 0 931.0276367068292 PEAK CID FTMS 0 0 0 9805 14620.736328125 1.0 0 0.0 2 5 {I|L} 1 -1 3.9794 0.0 0.0 0.21401 0.0 0.0 1562.277462148377 181.0626162164672 1743.3400783648442 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.21401 - 54 + 1 2.213 52703.2 1.0 5317 4488 9805 SUDHL4_400M_050219_1,9807 SUDHL4_400M_050219_1,9807, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9808 54.657 268.0 359170.0 25 0 19701.0 + 34471 SMFGAGLTV 9 113 882.4392195752689 881.4319431086689 1 882.4427978396416 MULTI CID FTMS 0 0 0 9805 244771.28125 0.1279284443045498 9 -0.1783943176269531 3 Unmodified _SMFGAGLTV_ ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B 85.27202061508552 0.0162393975915471 5 {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}QG{I|L}TV 8 2 + 60.742 0.0 0.0 6.8913 6.8913 94.667 0.0 0.0 0.0 16.593242408664644 10.74462415139152 10.74462415139152 16.593242408664644 0 0.9929928190999392 1.3979400086720375 2.0 0.0 {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}QG{I|L}TV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}MSG{I|L}TV;[{I|L}T]GVQ{[YC]|[HE]}V;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}GQ{I|L}TV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}G{[MS]|[{M(Oxidation (M))|F}A]}{I|L}TV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AG{I|L}TV;[{I|L}T]GV[C(Carbamidomethyl (C))S]{M(Oxidation (M))|F}V;[{I|L}T]GAGV{[YC]|[HE]}V;{[MS]|[{M(Oxidation (M))|F}A]}[KS]{[ET]|[MV]}TV;{[QG]|[NA]}{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}TV 6.8913;5.0088;3.8158;3.7261;3.6955;3.5682;3.5401;3.5131;3.5095;3.4957 -;-;-;-;-;-;-;-;-;- 2381 1 2.213 67094.0 1.0 5318 4488 9805 SUDHL4_400M_050219_1,9808 SUDHL4_400M_050219_1,9808,SMFGAGLTV True True SMFGAGLTV 54.656778 882.442797839642 9190139.0 9805.0 ENSG00000117410|ENST00000472174|ATP6V0B;;nc|ENSG00000117410|Q99437-2|ATP6V0B 6.748615582784017 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9809 54.667 612.0 97732.0 25 0 9987.2 -1 0 104 904.2449828982352 0 904.2449828982352 PEAK CID FTMS 0 0 0 -1 0 4 5 S 1 -1 6.9897 0.0 0.0 0.38692 0.0 0.0 1584.3747486560424 132.04596887760002 1716.4207175336423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.38692 - 7 + 1 2.213 46543.5 1.0 5319 4488 9805 SUDHL4_400M_050219_1,9809 SUDHL4_400M_050219_1,9809, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9810 54.681 800.0 64714.0 25 0 996.7 -1 0 98 1165.865432007205 0 1165.719409167767 PEAK CID FTMS 0 0 0 9805 37363.60546875 0.3026205222833708 2 -0.0641670227050781 5 5 YN 2 -1 10.969 0.0 0.0 0.47083 0.0 0.0 1358.2519078603102 691.3264254205686 2049.5783332808787 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YN 0.47083 - 13 + 1 2.213 35949.4 0.6200000047683716 5320 4488 9805 SUDHL4_400M_050219_1,9810 SUDHL4_400M_050219_1,9810, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9812 54.699 800.0 25625.0 25 0 2368.5 -1 0 50 990.064013659954 0 990.064013659954 PEAK CID FTMS 0 0 0 -1 0 1 5 Y 1 -1 4.6041 0.0 0.0 0.23275 0.0 0.0 1172.697411009558 639.3308809869749 1812.028291996533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.23275 - 3 + 1 2.264 23843.2 0.4300000071525574 5321 4489 9811 SUDHL4_400M_050219_1,9812 SUDHL4_400M_050219_1,9812, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9816 54.723 800.0 229690.0 25 0 21743.0 + 20274 LLDRFLATV 9 148 524.3132178221109 1046.6118827110215 2 524.3132202029228 MULTI CID FTMS 0 0 0 9815 114390.1796875 0.1356213251868584 -10 0.2488975524902343 1 Unmodified _LLDRFLATV_ ENSG00000118816|ENST00000237654|CCNI;nc|ENSG00000118816|Q14094-2|CCNI 107.09958533191995 0.0072323465566536 5 {I|L}{I|L}DR{M(Oxidation (M))|F}{I|L}ATV 9 0 + 89.333 0.0 0.0 8.5354 8.5354 93.127 0.0 0.0 0.0 9.2478773067036 13.226825097560422 9.2478773067036 8.57840941039747 0 2.0114393726401687 1.6989700043360187 0.5 0.2614393726401688 + + {I|L}{I|L}DR{M(Oxidation (M))|F}{I|L}ATV;{I|L}{I|L}DR{M(Oxidation (M))|F}A{I|L}TV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}R{M(Oxidation (M))|F}{I|L}ATV;{I|L}{I|L}DR{M(Oxidation (M))|F}{I|L}AS{I|L};{I|L}{I|L}DR{M(Oxidation (M))|F}AT{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}R{M(Oxidation (M))|F}A{I|L}TV;{I|L}{I|L}DR{M(Oxidation (M))|F}A{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}R{M(Oxidation (M))|F}{I|L}AS{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}R{M(Oxidation (M))|F}AT{I|L}V;{I|L}{I|L}DR{M(Oxidation (M))|F}ATV{I|L} 8.5354;7.7158;7.6518;7.2716;6.8461;6.8322;6.452;6.388;5.9625;5.5823 +;-;-;-;-;-;-;-;-;- + 5007 1 2.264 144132.5 0.5400000214576721 5322 4492 9815 SUDHL4_400M_050219_1,9816 SUDHL4_400M_050219_1,9816,LLDRFLATV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9817 54.737 800.0 101170.0 25 0 4262.2 28516 PTLQEVILANL 11 110 605.8557385267492 1209.6969241202985 2 605.8560058474541 MULTI CID FTMS 0 0 0 9815 86335.984375 0.0017809669432499 42 -0.7864646911621094 2 Unmodified _PTLQEVILANL_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 28.49450938151212 0.4231428536161201 5 {I|L}{I|L}D{I|L}VCYM 8 9 33.085 0.0 0.0 2.7349 0.0 0.0 0.0 256.2017484821824 256.2017484821824 13.29812217439503 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {I|L}{I|L}D{I|L}VCYM 2.7349 - 1104 1 2.264 60033.5 0.4900000095367431 5323 4492 9815 SUDHL4_400M_050219_1,9817 SUDHL4_400M_050219_1,9817,PTLQEVILANL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9818 54.751 800.0 24497.0 25 0 1614.9 -1 0 52 1197.4622442533898 0 1197.462329089642 PEAK CID FTMS 0 0 0 9815 165967.25 1.0 0 0.0 3 5 V 1 -1 3.9794 0.0 0.0 0.1663 0.0 0.0 1250.3750977823672 1040.4318331354127 2290.80693091778 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.1663 - 1 + 1 2.264 23541.5 0.8999999761581421 5324 4492 9815 SUDHL4_400M_050219_1,9818 SUDHL4_400M_050219_1,9818, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9819 54.753 136.0 100040.0 25 0 10536.0 -1 0 37 948.7357665896416 0 948.7357665896416 PEAK CID FTMS 0 0 0 -1 0 4 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.264 16628.9 1.0 5325 4492 9815 SUDHL4_400M_050219_1,9819 SUDHL4_400M_050219_1,9819, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9821 54.771 800.0 85809.0 25 0 8316.4 -1 0 100 1096.610797721354 0 1096.682177722454 PEAK CID FTMS 0 0 0 -1 0 1 5 {I|L} 1 -1 6.9897 0.0 0.0 0.31899 0.0 0.0 1501.791955694858 573.3051241510374 2075.097079845895 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.31899 - 41 + 1 2.264 48115.5 0.3199999928474426 5326 4493 9820 SUDHL4_400M_050219_1,9821 SUDHL4_400M_050219_1,9821, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9822 54.785 800.0 77289.0 25 0 1239.7 -1 0 99 1183.3306066894402 0 1183.520068347454 PEAK CID FTMS 0 0 0 9820 25077.701171875 0.2464818346728554 1 -0.0315742492675781 2 5 H 1 -1 3.3656 0.0 0.0 0.14233 0.0 0.0 1182.5479798810304 1042.0217989557252 2224.569778836756 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 H 0.14233 - 6 + 1 2.264 38678.2 0.2599999904632568 5327 4493 9820 SUDHL4_400M_050219_1,9822 SUDHL4_400M_050219_1,9822, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9824 54.794 370.0 270300.0 25 0 19753.0 + 9678 FLQPELVKL 9 109 543.8314614874039 1085.6483700416077 2 543.8320800662041 MULTI CID FTMS 0 0 0 9823 107864.4375 0.7571512225339915 2 -0.0130119323730468 1 Unmodified _FLQPELVKL_ ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4 51.629811660486645 0.0367964933207742 5 {M(Oxidation (M))|F}{I|L}QPE{I|L}VK{I|L} 9 0 + 56.627 0.0 0.0 5.216 5.216 87.689 0.0 0.0 0.0 -7.694546232731838 12.252684618815088 -7.694546232731838 9.208187539523747 0 0.7059771852360797 0.0 0.4247425010840047 0.5 + + {M(Oxidation (M))|F}{I|L}QPE{I|L}VK{I|L};{M(Oxidation (M))|F}{I|L}[AG]PE{I|L}VK{I|L} 5.216;4.3678 +;- + 662 + 1 2.264 78023.7 1.0 5328 4494 9823 SUDHL4_400M_050219_1,9824 SUDHL4_400M_050219_1,9824,FLQPELVKL True True FLQPELVKL 54.794236 543.832080066204 1186730.125 9823.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4 5.615270137786865 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9827 54.809 482.0 344700.0 25 0 19287.0 + 33652 SITAVTPLL 9 121 914.5564191968336 913.5491427302336 1 914.5588867068292 MULTI CID FTMS 0 0 0 9826 174053.0 0.092644133363469 11 -0.1963729858398437 1 Unmodified _SITAVTPLL_ ENSG00000101194|ENST00000370351|SLC17A9;ENST00000488738.5_1_20:61584086-61594126:+|nuORF;nc|ENSG00000101194|Q9BYT1-2|SLC17A9;nc|ENSG00000101194|Q9BYT1-3|SLC17A9 107.99703571036002 0.0067560930197464 5 {[TV]|[{I|L}S]}ATVTP{I|L}{I|L} 9 2 + 65.033 0.0 0.0 7.1187 7.1187 88.182 0.0 0.0 0.0 4.762036441594191 15.829081542621983 4.762036441594191 4.286662482156345 0 1.8098943791441968 0.0 1.885151878060192 0.0 {[TV]|[{I|L}S]}ATVTP{I|L}{I|L};{[TV]|[{I|L}S]}TAVTP{I|L}{I|L};{[TV]|[{I|L}S]}ATTVP{I|L}{I|L};{[TV]|[{I|L}S]}AS{I|L}TP{I|L}{I|L};{[TV]|[{I|L}S]}A{I|L}STP{I|L}{I|L};{[TV]|[{I|L}S]}ATS{I|L}P{I|L}{I|L};{[TV]|[{I|L}S]}TATVP{I|L}{I|L};{[TV]|[{I|L}S]}TG{I|L}TP{I|L}{I|L};{[TV]|[{I|L}S]}TAS{I|L}P{I|L}{I|L};{[TV]|[{I|L}S]}TP{I|L}{I|L}{I|L}SA 7.1187;6.6494;6.0444;5.9585;5.9277;5.8299;5.5751;5.4892;5.3607;5.0819 -;+;-;-;-;-;-;-;-;- + 1906 1 2.264 110743.1 1.0 5329 4496 9826 SUDHL4_400M_050219_1,9827 SUDHL4_400M_050219_1,9827,SITAVTPLL True True SITAVTPLL 54.809117 914.558886706829 5327461.0 9826.0 nc|ENSG00000101194|Q9BYT1-2|SLC17A9;;ENST00000488738.5_1_20:61584086-61594126:+|nuORF;;ENSG00000101194|ENST00000370351|SLC17A9;;nc|ENSG00000101194|Q9BYT1-3|SLC17A9 4.842713673909505 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9828 54.813 205.0 34042.0 25 0 1988.4 -1 0 23 1191.270190417767 0 1191.270190417767 PEAK CID FTMS 0 0 0 -1 0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.264 16964.9 1.0 5330 4496 9826 SUDHL4_400M_050219_1,9828 SUDHL4_400M_050219_1,9828, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9831 54.833 800.0 46657.0 25 0 3199.0 -1 0 80 1079.9671487572086 0 1080.409228503704 PEAK CID FTMS 0 0 0 -1 0 1 5 YN 2 -1 9.464 0.0 0.0 0.43857 0.0 0.0 1670.665485403286 207.11512170963127 1877.780607112917 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YN 0.43857 - 34 + 1 2.264 34540.9 0.5799999833106995 5331 4498 9830 SUDHL4_400M_050219_1,9831 SUDHL4_400M_050219_1,9831, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9832 54.847 800.0 44033.0 25 0 3875.4 -1 0 68 988.8978759646416 0 988.8978759646416 PEAK CID FTMS 0 0 0 -1 0 2 5 P 1 -1 6.9897 0.0 0.0 0.35377 0.0 0.0 1510.5212488630484 365.1849764459594 1875.706225309008 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.35377 - 16 + 1 2.264 32493.7 0.4799999892711639 5332 4498 9830 SUDHL4_400M_050219_1,9832 SUDHL4_400M_050219_1,9832, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9833 54.861 800.0 41578.0 25 0 969.58 -1 0 77 1190.652064801999 0 1190.473437488079 PEAK CID FTMS 0 0 0 -1 0 3 5 K 1 -1 1.1092 0.0 0.0 0.046621 0.0 0.0 1257.2662134889604 990.8774508111936 2248.143664300154 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.046621 - 1 + 1 2.264 28495.3 0.5199999809265137 5333 4498 9830 SUDHL4_400M_050219_1,9833 SUDHL4_400M_050219_1,9833, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9836 54.881 800.0 73896.0 25 0 7716.0 -1 0 80 1086.860113422426 3257.5585108674786 3 1087.531298816204 MULTI CID FTMS 0 0 0 9835 53640.90234375 0.3012282335648295 -7 0.1115341186523437 1 5 VM{[QD]|[EN]|[WG]|[KD]|[RS]} 4 -1 21.198 0.0 0.0 0.65073 0.0 0.0 2766.317378092959 0.0 2766.317378092959 0.0 14.208187539523747 0.0 0.0 0 0.5 0.0 0.0 0.0 VM{[QD]|[EN]|[WG]|[KD]|[RS]} 0.65073 - 51 1 2.264 45774.2 0.6399999856948853 5334 4500 9835 SUDHL4_400M_050219_1,9836 SUDHL4_400M_050219_1,9836, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9837 54.885 210.0 310190.0 25 0 16567.0 + 37929 TLYNTEVLL 9 101 1065.5819012109532 1064.5746247443533 1 1065.585009753704 MULTI CID FTMS 0 0 0 9835 315427.21875 0.8176257638760127 6 -0.1040992736816406 2 Unmodified _TLYNTEVLL_ ENSG00000151702|ENST00000527786|FLI1;nc|ENSG00000151702|Q01543-2|FLI1;nc|ENSG00000151702|Q01543-3|FLI1 69.10491478415734 0.0214449631113747 5 [{I|L}T]YSQEV{I|L}{I|L} 9 2 + 70.002 0.0 0.0 6.5756 6.5756 86.246 0.0 0.0 0.0 3.668403543576261 14.973024840566469 3.668403543576261 3.668403543576261 0 0.0 0.0 1.9361818737241727 1.3807196863200843 [{I|L}T]YSQEV{I|L}{I|L};[YN]T{I|L}TEV{I|L}{I|L};[Y{I|L}]TSQEV{I|L}{I|L};{[QS]|[NT]}Y{I|L}TEV{I|L}{I|L};[{I|L}T]YNTEV{I|L}{I|L};[YN]T{I|L}D{I|L}T{I|L}{I|L};[YN]{I|L}TTEV{I|L}{I|L};[YN]T{I|L}ETV{I|L}{I|L};[YN]TEV{I|L}T{I|L}{I|L};[{I|L}T]DNY{I|L}T{I|L}{I|L} 6.5756;6.231;6.01;5.9482;5.9482;5.6778;5.6654;5.6038;5.5299;5.5124 -;-;-;-;+;-;-;-;-;- + 5786 1 2.264 47733.8 1.0 5335 4500 9835 SUDHL4_400M_050219_1,9837 SUDHL4_400M_050219_1,9837,TLYNTEVLL True True TLYNTEVLL 54.885421 1065.5850097537 2780809.5 9835.0 nc|ENSG00000151702|Q01543-2|FLI1;;ENSG00000151702|ENST00000527786|FLI1;;nc|ENSG00000151702|Q01543-3|FLI1 5.364593664805095 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9840 54.899 386.0 116860.0 25 0 5789.1 + 9538 FLGDYVENL 9 80 1069.5191909566306 1068.511914490031 1 1069.522387683392 MULTI CID FTMS 0 0 0 9839 142540.03125 0.5842911330155904 -7 0.094818115234375 1 Unmodified _FLGDYVENL_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 53.832793166522166 0.0319663582346103 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DG]YVEN{I|L} 9 0 + 60.797 0.0 0.0 5.6899 5.6899 85.472 0.0 0.0 0.0 5.333012287035501 9.845143534448011 5.333012287035501 5.333012287035501 0 0.9559771852360796 0.0 0.9876954943324544 0.4247425010840047 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DG]YVEN{I|L};[YV]DG{M(Oxidation (M))|F}{I|L}EN{I|L};[YV]{M(Oxidation (M))|F}WVEN{I|L};[YV]{M(Oxidation (M))|F}EGVEN{I|L};[YV]DG{I|L}{M(Oxidation (M))|F}EN{I|L};[YV]E{M(Oxidation (M))|F}GVEN{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DG]YD{I|L}N{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[YD]|[{M(Oxidation (M))|F}M]}GVEN{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TW{M(Oxidation (M))|F}EN{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DG]YVEGG{I|L} 5.6899;5.1908;4.9494;4.9469;4.7666;4.5004;4.495;4.4838;4.4774;4.4306 +;-;-;-;-;-;-;-;-;- + 2394 1 2.264 36041.7 1.0 5336 4502 9839 SUDHL4_400M_050219_1,9840 SUDHL4_400M_050219_1,9840,FLGDYVENL True True FLGDYVENL 54.898585 1069.52238768339 1438264.375 9839.0 nc|ENSG00000129003|Q709C8-3|VPS13C;;ENSG00000129003|ENST00000644861|VPS13C;;nc|ENSG00000129003|Q709C8-4|VPS13C;;nc|ENSG00000129003|Q709C8-2|VPS13C 5.452734152475993 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9841 54.912 800.0 108890.0 25 0 27098.0 + 33458 SIFKAWAV 8 89 461.2635694837582 920.5125860343164 2 461.2634460330009 MULTI CID FTMS 0 0 0 9839 100926.71875 1.0 0 0.0 2 Unmodified _SIFKAWAV_ ENSG00000140968|ENST00000268638|IRF8 54.773552608820026 0.1167943196628344 5 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}KAWAV 8 0 + 58.269 0.0 0.0 6.33 6.33 92.388 0.0 0.0 0.0 26.73593567092773 12.302819856851386 12.302819856851386 12.302819856851386 0 1.4604093769761874 2.0 0.0 0.0 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}KAWAV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VQA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VGAA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RAA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AK[Y{I|L}]AV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{M(Oxidation (M))|F}{[TV]|[{I|L}S]}AV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KA[Y{I|L}]AV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{[TV]|[{I|L}S]}WAV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AW{[TV]|[{I|L}S]}AV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[TV]|[{I|L}S]}AWAV 6.33;4.9935;4.6606;4.6296;3.4256;3.0985;2.5802;2.2699;2.103;1.5976 +;-;-;-;-;-;-;-;-;- + 275 + 1 2.264 74093.6 0.4600000083446502 5337 4502 9839 SUDHL4_400M_050219_1,9841 SUDHL4_400M_050219_1,9841,SIFKAWAV True True SIFKAWAV 54.9124 461.263446033001 456027.65625 9839.0 ENSG00000140968|ENST00000268638|IRF8 4.973963340123494 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9842 54.921 492.0 51730.0 25 0 1207.3 -1 0 62 1116.0721636867866 2230.129774440373 2 1115.960253894329 MULTI CID FTMS 0 0 0 -1 0 3 5 D 1 -1 4.6041 0.0 0.0 0.20645 0.0 0.0 1316.236599246817 795.8520601861936 2112.0886594330104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.20645 - 7 + 1 2.264 24148.5 1.0 5338 4502 9839 SUDHL4_400M_050219_1,9842 SUDHL4_400M_050219_1,9842, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9844 54.939 800.0 41507.0 25 0 2516.2 -1 0 83 782.1946899294853 0 782.1946899294853 PEAK CID FTMS 0 0 0 -1 0 1 5 A 1 -1 2.2185 0.0 0.0 0.14199 0.0 0.0 1356.268700072058 132.04598413638908 1488.314684208447 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.14199 - 14 + 1 2.291 31248.1 0.3899999856948852 5339 4503 9843 SUDHL4_400M_050219_1,9844 SUDHL4_400M_050219_1,9844, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9847 54.955 572.0 249490.0 25 0 58410.0 + 37775 TLSDLRVYL 9 96 540.3084010694464 1078.6022492056927 2 540.3090087771416 MULTI CID FTMS 0 0 0 9846 115506.03125 0.4945762364646764 -3 0.0535697937011718 1 Unmodified _TLSDLRVYL_ ENSG00000271303|ENST00000381962|SRXN1;ENST00000488788.2_1_20:629360-656142:-|nuORF 55.50274090549119 0.0285720310785888 5 [{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}TY{I|L} 9 5 + 68.369 0.0 0.0 6.3386 6.3386 83.659 0.0 0.0 0.0 18.925902063716865 25.393039838554472 18.925902063716865 1.989700043360188 0 1.3494850021680094 2.0 0.25 0.7302046884880937 [{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}TY{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VY{I|L}T{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}YT{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}T]VY{I|L};[{M(Oxidation (M))|F}V][QP]V{I|L}TY{I|L};[{M(Oxidation (M))|F}V][QP]VY{I|L}T{I|L};{[TV]|[{I|L}S]}[RD]V{I|L}TY{I|L};[{M(Oxidation (M))|F}V][QP]V{I|L}YT{I|L};{[TV]|[{I|L}S]}[RD]VY{I|L}T{I|L};{[TV]|[{I|L}S]}[RD]V{I|L}YT{I|L} 6.3386;6.1542;5.8751;5.1543;4.5269;4.3425;4.1196;4.0634;3.9351;3.656 -;-;-;-;-;-;-;-;-;- 320 1 2.291 114219.1 1.0 5340 4505 9846 SUDHL4_400M_050219_1,9847 SUDHL4_400M_050219_1,9847,TLSDLRVYL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9848 54.969 800.0 162500.0 25 0 18786.0 + 9240 FGVIPSTPL 9 125 930.5291140187446 929.5218375521446 1 930.532763659954 MULTI CID FTMS 0 0 0 9846 113458.8671875 0.8276505761118463 3 -0.055389404296875 2 Unmodified _FGVIPSTPL_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 57.47134341890925 0.0274820932774257 5 {I|L}[DG]{I|L}P{I|L} 6 5 50.718 0.0 0.0 5.4564 0.0 0.0 303.15903202914586 0.0 303.15903202914586 0.0 30.757659435244733 0.0 0.0 0 1.3807196863200843 0.0 0.8494850021680094 0.0 {I|L}[DG]{I|L}P{I|L} 5.4564 - 991 1 2.291 87183.9 0.5400000214576721 5341 4505 9846 SUDHL4_400M_050219_1,9848 SUDHL4_400M_050219_1,9848,FGVIPSTPL True True FGVIPSTPL 54.969075 930.532763659954 839623.4375 9846.0 nc|ENSG00000006125|P63010|AP2B1;;ENSG00000006125|ENST00000610402|AP2B1;;nc|ENSG00000006125|P63010-3|AP2B1 4.852152983347575 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9850 54.974 99.0 584260.0 25 0 59216.0 + 20275 LLDRFLATV 9 77 524.3132178221109 1046.6118827110215 2 524.3137084841728 MULTI CID FTMS 0 0 0 9849 613943.0 0.7278925820088914 4 -0.0726165771484375 1 Unmodified _LLDRFLATV_ ENSG00000118816|ENST00000237654|CCNI;nc|ENSG00000118816|Q14094-2|CCNI 61.60191391372663 0.0251951588191061 5 {I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}ATV 9 0 + 62.5 0.0 0.0 5.9716 5.9716 82.414 0.0 0.0 0.0 10.742946587693964 24.554334654473628 10.742946587693964 1.7609125905568137 0 1.0610312860818771 1.6989700043360187 0.3807196863200844 0.0 + + {I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}ATV;{I|L}{I|L}[RD]{M(Oxidation (M))|F}A{I|L}TV;{I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}AS{I|L};{I|L}{I|L}[RD]{M(Oxidation (M))|F}A{I|L}S{I|L};{I|L}{I|L}[RD]{M(Oxidation (M))|F}AS{I|L}{I|L} 5.9716;5.8034;5.1479;4.9797;3.8341 +;-;-;-;- + 225 1 2.291 51572.5 1.0 5342 4506 9849 SUDHL4_400M_050219_1,9850 SUDHL4_400M_050219_1,9850,LLDRFLATV True True LLDRFLATV 54.973862 524.313708484173 9856116.0 9849.0 ENSG00000118816|ENST00000237654|CCNI;;nc|ENSG00000118816|Q14094-2|CCNI 7.095173041025798 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9851 54.988 800.0 127240.0 25 0 2497.7 -1 0 125 1158.8655000725958 0 1158.867724597454 PEAK CID FTMS 0 0 0 9849 180232.84375 1.0 0 0.0 2 5 N{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}H 6 -1 15.718 0.0 0.0 0.67877 0.0 0.0 571.9117119598417 952.3900850885374 1524.301797048379 0.0 0.0 0.0 0.0 0 0.2302046884880938 0.0 0.0 0.0 N{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}H 0.67877 - 761 + 1 2.291 62384.7 0.6000000238418579 5343 4506 9849 SUDHL4_400M_050219_1,9851 SUDHL4_400M_050219_1,9851, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9852 54.994 344.0 56460.0 25 0 6017.2 -1 0 48 1149.3857607915238 0 1149.875170886517 PEAK CID FTMS 0 0 0 9849 15679.4814453125 0.8598064853052343 -1 0.0264167785644531 3 5 G 1 -1 6.9897 0.0 0.0 0.30433 0.0 0.0 791.9958124992603 1444.6933077447875 2236.689120244048 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.30433 - 5 + 1 2.291 20689.2 1.0 5344 4506 9849 SUDHL4_400M_050219_1,9852 SUDHL4_400M_050219_1,9852, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9855 55.014 800.0 187120.0 25 0 21090.0 + 17367 KMAEMLVEL 9 128 532.2793390159853 1062.5441250987706 2 532.2802612185478 MULTI CID FTMS 0 0 0 9854 169168.78125 0.7533665181569731 -3 0.055389404296875 1 Unmodified _KMAEMLVEL_ ENSG00000178988|ENST00000320848|MRFAP1L1;ENSG00000179010|ENST00000382581|MRFAP1 63.960520009940105 0.0238892913700936 5 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L} 9 3 + 87.572 0.0 0.0 8.2417 8.2417 92.648 0.0 0.0 0.0 17.78151250383644 16.478174818886373 16.478174818886373 8.26606256887672 0 1.066901560044258 1.3010299956639813 1.4049471895720984 0.0 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}CMK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}C{I|L}MKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}CK{I|L}MVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}C{I|L}KMVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}CMKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}EV{I|L};{NN|[MP]|[D{I|L}]|[EV]}CKMV{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}CM{I|L}KVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}MCKVE{I|L} 8.2417;7.4638;7.441;7.0857;7.0401;6.9919;6.9585;6.9344;6.7086;6.697 -;-;-;-;-;-;-;-;-;- 5629 1 2.291 120512.0 0.5099999904632568 5345 4508 9854 SUDHL4_400M_050219_1,9855 SUDHL4_400M_050219_1,9855,KMAEMLVEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9856 55.028 800.0 154630.0 25 0 12800.0 + 29510 QLLETLNQL 9 126 536.3035514728789 1070.5925500125577 2 536.3035156130791 MULTI CID FTMS 0 0 0 9854 99327.578125 0.861863950697911 -1 0.0036468505859375 2 Unmodified _QLLETLNQL_ ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 68.08070601005525 0.0218408846571049 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[TP]PP{I|L}{M(Oxidation (M))|F} 9 7 + 46.806 0.0 0.0 4.372 4.372 81.257 0.0 0.0 0.0 4.895130603070157 4.895130603070157 4.895130603070157 4.895130603070157 0 1.424742501084005 1.0969100130080565 0.9247425010840048 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}R[TP]PP{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PP{I|L}{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]P[TP]PP{I|L}{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]Y[KT]P{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}VNQ{I|L};[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}N{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QN]|[E{I|L}]|[KN]}[RH][Y{I|L}]Q{I|L};[{I|L}P]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}N{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QV]|[N{I|L}]|[RA]|[KV]}EP{I|L}{I|L}N{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4.372;3.9147;3.7191;2.4886;1.9237;0.72769;0.48811;0.44891;0.30979 -;-;-;-;-;-;-;-;- 1006 1 2.291 101144.4 0.4600000083446502 5346 4508 9854 SUDHL4_400M_050219_1,9856 SUDHL4_400M_050219_1,9856,QLLETLNQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9857 55.038 550.0 93644.0 25 0 9057.5 + 18230 KVFSAFITV 9 80 506.2973293875536 1010.5801058419072 2 506.2976867556572 MULTI CID FTMS 0 0 0 9854 103773.203125 1.0 0 0.0 3 Unmodified _KVFSAFITV_ ENSG00000095319|ENST00000372577|NUP188;ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188 29.081581746732265 0.1611639662936252 5 {I|L}{M(Oxidation (M))|F}[WK]TV 6 6 29.385 0.0 0.0 2.9078 0.0 0.0 218.1273537018222 0.0 218.1273537018222 0.0 14.948500216800936 0.0 0.0 0 0.0 0.0 0.6989700043360187 0.0 {I|L}{M(Oxidation (M))|F}[WK]TV 2.9078 - 270 + 1 2.291 43845.9 1.0 5347 4508 9854 SUDHL4_400M_050219_1,9857 SUDHL4_400M_050219_1,9857,KVFSAFITV False True KVFSAFITV 55.037906 506.297686755657 457809.625 9854.0 ENST00000477069.5_1_9:131747266-131765892:+|nuORF;;ENSG00000095319|ENST00000372577|NUP188;;nc|ENSG00000095319|Q5SRE5-2|NUP188 4.526326815287272 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9860 55.058 800.0 54169.0 25 0 2613.4 -1 0 103 952.961962878704 0 952.961962878704 PEAK CID FTMS 0 0 0 -1 0 1 5 P 1 -1 5.4846 0.0 0.0 0.28807 0.0 0.0 1579.729149290808 224.10486780338127 1803.8340170941888 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.28807 - 83 + 1 2.291 37180.0 0.4600000083446502 5348 4510 9859 SUDHL4_400M_050219_1,9860 SUDHL4_400M_050219_1,9860, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9861 55.072 800.0 115740.0 25 0 12213.0 + 29505 QLLEKVIEL 9 123 542.8342578174438 1083.6539627016875 2 542.8336669802666 MULTI CID FTMS 0 0 0 9859 81793.3046875 0.3312839766798808 5 -0.1218185424804687 2 Unmodified _QLLEKVIEL_ ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;nc|ENSG00000093144|Q9NTX5-4|ECHDC1;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1 43.85829265575387 0.0542763391141878 5 {[QN]|[E{I|L}]|[KN]}KV{I|L}{M(Oxidation (M))|F}{I|L} 7 3 43.859 0.0 0.0 4.0474 0.0 0.0 0.0 238.1147921457541 238.1147921457541 14.874407759158988 0.0 0.0 0.0 0 0.2742275032520141 1.154901959985743 1.0138793319624575 0.0 {[QN]|[E{I|L}]|[KN]}KV{I|L}{M(Oxidation (M))|F}{I|L} 4.0474 - 979 1 2.291 74136.1 0.4000000059604645 5349 4510 9859 SUDHL4_400M_050219_1,9861 SUDHL4_400M_050219_1,9861,QLLEKVIEL True True QLLEKVIEL 55.071916 542.833666980267 1409551.625 9859.0 nc|ENSG00000093144|Q9NTX5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;;ENSG00000093144|ENST00000454859|ECHDC1;;nc|ENSG00000093144|Q9NTX5-4|ECHDC1 2.7200258572896323 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9862 55.086 800.0 50531.0 25 0 2545.1 -1 0 89 1090.6979794256738 0 1090.697802722454 PEAK CID FTMS 0 0 0 9859 121407.0234375 1.0 0 0.0 3 5 {I|L} 1 -1 6.9897 0.0 0.0 0.32072 0.0 0.0 1583.0293073847477 480.2486666315063 2063.277974016254 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.32072 - 4 + 1 2.291 33559.9 0.5899999737739563 5350 4510 9859 SUDHL4_400M_050219_1,9862 SUDHL4_400M_050219_1,9862, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9863 55.1 800.0 187000.0 25 0 85374.0 + 43401 WQRVIQHI 8 93 1079.6072824798025 1078.6000060132023 1 1079.609912097454 MULTI CID FTMS 0 0 0 9859 100286.171875 0.7339457252161106 1 -0.057952880859375 4 Unmodified _WQRVIQHI_ REV__ENSG00000106397|ENST00000223127|PLOD3;REV__ENST00000478082.5_1_7:100856177-100861250:-|nuORF 8.593279151180031 0.7721714526254883 5 WQY[KS]{I|L} 6 -1 29.698 0.0 0.0 2.7534 0.0 0.0 255.15867812324376 0.0 255.15867812324376 0.0 19.151603310239903 0.0 0.0 0 0.0 0.0 0.0 0.7302046884880937 WQY[KS]{I|L} 2.7534 - 169 1 2.291 100416.1 0.5699999928474426 5351 4510 9859 SUDHL4_400M_050219_1,9863 SUDHL4_400M_050219_1,9863,WQRVIQHI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9865 55.117 800.0 104310.0 25 0 4555.8 -1 0 90 1023.7715143468254 0 1023.757861316204 PEAK CID FTMS 0 0 0 9864 10650.3125 0.5663062448365588 -1 0.057952880859375 1 5 {I|L}T{I|L}[YT]{I|L}N 7 -1 31.462 0.0 0.0 1.5381 0.0 0.0 1041.0236260013955 183.0417116754516 1224.065337676847 0.0 0.0 0.0 0.0 0 0.0 0.0 1.055462187404089 2.1989700043360187 {I|L}T{I|L}[YT]{I|L}N 1.5381 - 4573 + 1 2.291 58617.7 0.4399999976158142 5352 4511 9864 SUDHL4_400M_050219_1,9865 SUDHL4_400M_050219_1,9865, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9866 55.131 800.0 72459.0 25 0 4504.4 -1 0 78 1159.2007676742764 0 1159.195971667767 PEAK CID FTMS 0 0 0 9864 109032.5703125 1.0 0 0.0 2 5 EY{M(Oxidation (M))|F} 3 -1 16.198 0.0 0.0 0.69927 0.0 0.0 784.731740027934 1089.4316053939478 1874.1633454218816 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 EY{M(Oxidation (M))|F} 0.69927 - 46 + 1 2.291 41277.6 0.5 5353 4511 9864 SUDHL4_400M_050219_1,9866 SUDHL4_400M_050219_1,9866, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9869 55.147 524.0 308830.0 25 0 63447.0 + 20290 LLDVPTAAV 9 141 898.5249698717046 897.5176934051045 1 898.5262328982353 MULTI CID FTMS 0 0 0 9868 191877.765625 0.808309951593595 -2 0.0357322692871093 1 Unmodified _LLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 68.08070601005525 0.0218408846571049 5 {I|L}{I|L}DVPTAAV 9 0 + 64.413 0.0 0.0 7.1768 7.1768 82.937 0.0 0.0 0.0 0.0263012960569568 9.885953578833965 0.0263012960569568 0.0263012960569568 0 1.867130270739436 1.154901959985743 0.805462187404089 0.0 + + {I|L}{I|L}DVPTAAV;[TP]AVD{I|L}{I|L}AV;[TP]AV{[QN]|[E{I|L}]|[KN]}VAV;[TP]AAVD{I|L}{I|L}V;[TP]A{I|L}{NN|[MP]|[D{I|L}]|[EV]}VAV;[TP]AA{I|L}{I|L}DVV;[TP]AAV{[QN]|[E{I|L}]|[KN]}VV;[TP]AV{[QN]|[E{I|L}]|[KN]}AVV;[TP]AVDA{I|L}{I|L}V;[TP]AVAD{I|L}{I|L}V 7.1768;7.1739;6.9188;6.7604;6.4755;5.9925;5.9816;5.9449;5.861;5.7679 +;-;-;-;-;-;-;-;-;- + 3018 1 2.291 106102.1 1.0 5354 4513 9868 SUDHL4_400M_050219_1,9869 SUDHL4_400M_050219_1,9869,LLDVPTAAV True True LLDVPTAAV 55.147157 898.526232898235 104998725.75 9868.0 ENSG00000216490|ENST00000407280|IFI30 8.551370620727539 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9870 55.16 738.0 191770.0 25 0 40367.0 37323 TIVAVTKVI 9 119 472.3128853440368 942.6112177548736 2 472.3130065798759 MULTI CID FTMS 0 0 0 9868 88965.328125 0.3988466066893366 -6 0.1409759521484375 2 Unmodified _TIVAVTKVI_ ENST00000563894.1_1_15:75090907-75091078:+|nuORF 45.69961567697781 0.0497987121815769 5 [{I|L}T]VA{I|L}S{I|L}KV 9 4 + 71.49 0.0 0.0 7.5843 7.5843 85.054 0.0 0.0 0.0 23.8356801236881 1.4266750356873104 1.4266750356873104 0.9691001300805624 0 1.024227503252014 2.0 0.805462187404089 0.1923877696554315 [{I|L}T]VA{I|L}S{I|L}KV;[{I|L}T]{I|L}G{I|L}S{I|L}KV;[{I|L}T]VA{I|L}S{I|L}VK;[{I|L}T]{I|L}G{I|L}S{I|L}VK;[{I|L}T]V{I|L}AS{I|L}KV;[{I|L}T]{I|L}VAS{I|L}KV;[{I|L}T]V{I|L}AS{I|L}VK;[{I|L}T]{I|L}VAS{I|L}VK;[{I|L}T]VG{I|L}KV[{I|L}T];[{I|L}T]VAVKV[{I|L}T] 7.5843;7.4815;7.433;7.3301;6.4137;6.3109;6.2624;6.1596;5.5608;5.3929 -;-;-;-;-;-;-;-;-;- 1009 + 1 2.291 111437.7 1.0 5355 4513 9868 SUDHL4_400M_050219_1,9870 SUDHL4_400M_050219_1,9870,TIVAVTKVI True True TLIGLSIKV 55.159932 472.313006579876 986493.5625 9868.0 ENSG00000166595|ENST00000422424|CIAO2B;;ENST00000569299.1_1_16:66967504-66968009:-|nuORF;;ENST00000562362.5_1_16:66966108-66968009:-|nuORF 4.770674546559651 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9873 55.18 800.0 144140.0 25 0 24709.0 -1 0 99 704.4011156782477 703.3938392116477 1 704.4015991091728 MULTI CID FTMS 0 0 0 9872 184016.625 0.8221119765294833 5 -0.1069488525390625 1 5 [MT]{I|L}{I|L}N{I|L} 6 -1 + 60.231 0.0 0.0 8.5628 8.5628 90.954 0.0 0.0 0.0 7.901442972186459 13.812281309285623 7.901442972186459 5.025749891599531 0 0.7614393726401688 1.0457574905606752 1.555462187404089 0.5 [MT]{I|L}{I|L}N{I|L};[MT]{I|L}N{I|L}{I|L};[{I|L}T]M{I|L}N{I|L};[{I|L}T]MN{I|L}{I|L};[MT]{I|L}{I|L}GG{I|L};{I|L}{I|L}TMN{I|L};{I|L}TM{I|L}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TM{I|L};[{I|L}T]{I|L}MN{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{I|L}N{I|L} 8.5628;7.8483;7.4395;6.725;6.5128;5.8565;5.6955;5.53;5.5091;5.4032 -;-;-;-;-;-;-;-;-;- 491 1 2.291 87713.5 0.4799999892711639 5356 4515 9872 SUDHL4_400M_050219_1,9873 SUDHL4_400M_050219_1,9873, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9874 55.194 800.0 30960.0 25 0 1031.2 -1 0 60 1083.218432605267 0 1083.218432605267 PEAK CID FTMS 0 0 0 -1 0 2 5 Y 1 -1 3.0989 0.0 0.0 0.14318 0.0 0.0 1132.9062733142466 865.4188936822874 1998.3251669965337 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.14318 - 2 + 1 2.291 22605.1 0.7599999904632568 5357 4515 9872 SUDHL4_400M_050219_1,9874 SUDHL4_400M_050219_1,9874, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9875 55.199 282.0 46260.0 25 0 3012.9 -1 0 35 1093.6686902873475 0 1093.315722644329 PEAK CID FTMS 0 0 0 -1 0 3 5 PP 2 -1 10.969 0.0 0.0 0.50194 0.0 0.0 1536.999922442961 451.1948336236938 1988.1947560666547 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.50194 - 6 + 1 2.291 17894.1 1.0 5358 4515 9872 SUDHL4_400M_050219_1,9875 SUDHL4_400M_050219_1,9875, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9876 55.204 293.0 81289.0 25 0 5689.7 + -1 SLITPLQAV 9 65 941.0662109255792 0 941.0662109255792 PEAK CID FTMS 0 0 0 -1 0 4 ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 5 A 1 -1 6.9897 0.0 0.0 0.37177 0.0 0.0 1470.8843311755736 335.1721590631469 1806.0564902387205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.37177 - 4 + 1 2.291 21326.8 1.0 5359 4515 9872 SUDHL4_400M_050219_1,9876 SUDHL4_400M_050219_1,9876, False False SLITPLQAV 55.204375 941.066210925579 457168.625 9872.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 5.439508120218913 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9878 55.222 800.0 114000.0 25 0 25507.0 + 37776 TLSDLRVYL 9 91 540.3084010694464 1078.6022492056927 2 540.3087036013603 MULTI CID FTMS 0 0 0 9877 42398.43359375 0.1815425349816473 8 -0.1250839233398437 1 Unmodified _TLSDLRVYL_ ENSG00000271303|ENST00000381962|SRXN1;ENST00000488788.2_1_20:629360-656142:-|nuORF 38.17557092003332 0.0854718145212029 5 [{I|L}T]SD{I|L}RVY{I|L} 9 0 + 67.809 0.0 0.0 6.2868 6.2868 94.21 0.0 0.0 0.0 49.85022798053279 12.98332479720628 12.98332479720628 34.24865027867404 0 1.1677353201839438 2.0 0.4247425010840047 0.0 + + [{I|L}T]SD{I|L}RVY{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}T]VY{I|L};{[TV]|[{I|L}S]}[RD][{I|L}T]VY{I|L};{I|L}{I|L}[MN][{I|L}T]VY{I|L} 6.2868;3.1115;1.422;1.0271 +;-;-;- + 118 + 1 2.291 76693.5 0.4099999964237213 5360 4516 9877 SUDHL4_400M_050219_1,9878 SUDHL4_400M_050219_1,9878,TLSDLRVYL True True TLSDLRVYL 55.221894 540.30870360136 2297121.0 9877.0 ENST00000488788.2_1_20:629360-656142:-|nuORF;;ENSG00000271303|ENST00000381962|SRXN1 4.945995171864827 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9882 55.243 602.0 208940.0 25 0 13598.0 + 29401 QLDPTLLQM 9 117 1058.556210293509 1057.5489338269088 1 1058.559985339642 MULTI CID FTMS 0 0 0 9881 131327.234375 0.9031352167528476 -5 0.0698089599609375 1 Unmodified _QLDPTLLQM_ ENSG00000102974|ENST00000264010|CTCF;ENST00000566078.1_1_16:67644735-67645545:+|nuORF 125.0377797344192 0.0019632425973841 5 [TP]{I|L}DQ{I|L}{I|L}QM 9 4 + 94.254 0.0 0.0 8.9125 8.9125 85.63 0.0 0.0 0.0 8.284634594678266 16.478174818886373 8.284634594678266 0.414478256039672 0 0.9634679910804403 0.0 2.646591250700361 1.6549471895720984 [TP]{I|L}DQ{I|L}{I|L}QM;[TP]{I|L}QD{I|L}{I|L}QM;[TP]{I|L}{I|L}DQ{I|L}QM;[TP]{I|L}{I|L}QD{I|L}QM;[TP]{I|L}D{I|L}Q{I|L}QM;[TP]{I|L}Q{I|L}D{I|L}QM;[TP]D{I|L}Q{I|L}{I|L}QM;[Q{I|L}]DPT{I|L}{I|L}QM;[TP]{I|L}DQ{I|L}{I|L}[AG]M;[TP]{I|L}QD{I|L}{I|L}[AG]M 8.9125;8.8733;8.6821;8.5858;8.5145;8.3789;8.2009;8.1291;8.0418;8.0026 -;-;-;-;-;-;-;+;-;- + 2355 1 2.291 84468.1 1.0 5361 4519 9881 SUDHL4_400M_050219_1,9882 SUDHL4_400M_050219_1,9882,QLDPTLLQM True True QLDPTLLQM 55.242798 1058.55998533964 799730.9375 9881.0 ENSG00000102974|ENST00000264010|CTCF;;ENST00000566078.1_1_16:67644735-67645545:+|nuORF 8.27971855799357 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9883 55.257 800.0 210830.0 25 0 31073.0 + 35696 SVFPRAVAL 9 109 480.2872929797293 958.5600330262586 2 480.2875549197197 MULTI CID FTMS 0 0 0 9881 89698.0703125 0.1103715433552932 -20 0.3685684204101562 2 Unmodified _SVFPRAVAL_ REV__ENSG00000213903|ENST00000345363|LTB4R 54.773552608820026 0.0299037012502309 5 [VS]{M(Oxidation (M))|F}PR{I|L}Q{I|L} 8 -1 + 72.644 0.0 0.0 7.5785 7.5785 94.808 0.0 0.0 0.0 45.74343707632177 13.399480616943508 13.399480616943508 10.204262829037845 0 1.055462187404089 2.0 0.0 1.5994850021680094 [VS]{M(Oxidation (M))|F}PR{I|L}Q{I|L};[VS]{M(Oxidation (M))|F}{I|L}[RP]Q{I|L};[VS]{I|L}MR{I|L}Q{I|L};[VS]{M(Oxidation (M))|F}PR{I|L}[AG]{I|L};[VS]{I|L}{M(Oxidation (M))|F}[RP]Q{I|L};[VS]{M(Oxidation (M))|F}{I|L}[RP][AG]{I|L};[VS]{M(Oxidation (M))|F}{I|L}[HK][KT];[VS]{I|L}MR{I|L}[AG]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}SVV{I|L}{M(Oxidation (M))|F}[PA];[VS]{I|L}{M(Oxidation (M))|F}[HK][KT] 7.5785;6.5139;6.1886;6.1691;5.1241;5.1046;5.0211;4.7793;4.3538;4.0284 -;-;-;-;-;-;-;-;-;- 499 + 1 2.291 137165.8 0.4199999868869781 5362 4519 9881 SUDHL4_400M_050219_1,9883 SUDHL4_400M_050219_1,9883,SVFPRAVAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9884 55.27 800.0 47275.0 25 0 1036.6 + -1 RRRRRRRWKIC 11 75 850.0118621793674 0 850.4930908083916 PEAK CID FTMS 0 0 0 -1 0 3 Carbamidomethyl (C) _RRRRRRRWKIC(Carbamidomethyl (C))_ REV__ENST00000303961.8_1_19:41306371-41306464:+|nuORF 0.0 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 32028.1 0.449999988079071 5363 4519 9881 SUDHL4_400M_050219_1,9884 SUDHL4_400M_050219_1,9884,RRRRRRRWKIC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9886 55.288 800.0 115790.0 25 0 12277.0 + 17368 KMAEMLVEL 9 108 532.2793390159853 1062.5441250987706 2 532.2798950076103 MULTI CID FTMS 0 0 0 9885 49755.5546875 0.2215785248136067 9 -0.1418724060058593 1 Unmodified _KMAEMLVEL_ ENSG00000178988|ENST00000320848|MRFAP1L1;ENSG00000179010|ENST00000382581|MRFAP1 36.506200033944 0.094635877243972 5 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L} 9 3 + 72.075 0.0 0.0 6.7833 6.7833 90.479 0.0 0.0 0.0 14.885606273598311 16.478174818886373 14.885606273598311 8.634993639681312 0 0.3252574989159953 1.3010299956639813 1.0228787452803376 0.0 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}C{I|L}MKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}CKMV{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}CMKVE{I|L};{[QN]|[E{I|L}]|[KN]}MAMKVE{I|L};{[QN]|[E{I|L}]|[KN]}VCMKVE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AKM{I|L}VE{I|L};{[CP]|[EA]}MKM{I|L}VE{I|L};[{I|L}V]ECMKVE{I|L};[{I|L}V][C(Carbamidomethyl (C))S]M{I|L}VE{I|L} 6.7833;5.9706;5.7671;5.5961;5.3823;5.1735;5.1453;4.9219;4.8637;4.8528 -;-;-;-;-;-;-;-;-;- 1489 1 2.291 77431.5 0.3700000047683716 5364 4520 9885 SUDHL4_400M_050219_1,9886 SUDHL4_400M_050219_1,9886,KMAEMLVEL True True KMAEMLVEL 55.288158 532.27989500761 2498355.0 9885.0 ENSG00000179010|ENST00000382581|MRFAP1;;ENSG00000178988|ENST00000320848|MRFAP1L1 3.414421091477076 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9887 55.294 337.0 580640.0 25 0 44221.0 + 39040 TVTTVILEV 9 106 974.577015268546 973.569738801946 1 974.5768310427666 MULTI CID FTMS 0 0 0 9885 321484.59375 0.1506513846591817 12 -0.1884803771972656 2 Unmodified _TVTTVILEV_ ENSG00000119203|ENST00000238112|CPSF3 112.59319219568356 0.0043923200227745 5 {[TV]|[{I|L}S]}TTV{I|L}{I|L}EV 9 0 + 86.325 0.0 0.0 8.8668 8.8668 85.762 0.0 0.0 0.0 11.11297789578991 14.09256854528806 11.11297789578991 0.4980376447570478 0 0.5451140161145328 1.5228787452803376 3.2614393726401687 0.0 + + {[TV]|[{I|L}S]}TTV{I|L}{I|L}EV;{[TV]|[{I|L}S]}T{I|L}S{I|L}{I|L}EV;{[TV]|[{I|L}S]}{I|L}TS{I|L}{I|L}EV;{[TV]|[{I|L}S]}TTV{I|L}E{I|L}V;{[TV]|[{I|L}S]}T{I|L}{I|L}S{I|L}EV;{[TV]|[{I|L}S]}T{I|L}S{I|L}E{I|L}V;{[TV]|[{I|L}S]}TT{I|L}V{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[VG]V{I|L}{I|L}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}T{I|L}TV{I|L}EV;{[TV]|[{I|L}S]}{I|L}T{I|L}S{I|L}EV 8.8668;8.8157;8.3519;8.0205;7.9813;7.9694;7.7481;7.7254;7.697;7.5175 +;-;-;-;-;-;-;-;-;- + 3733 1 2.291 129407.7 1.0 5365 4520 9885 SUDHL4_400M_050219_1,9887 SUDHL4_400M_050219_1,9887,TVTTVILEV True True TVTTVILEV 55.294298 974.576831042767 13997747.0 9885.0 ENSG00000119203|ENST00000238112|CPSF3 5.370946725209554 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9888 55.308 800.0 71074.0 25 0 3903.0 -1 0 95 1178.820727527142 0 1178.820727527142 PEAK CID FTMS 0 0 0 -1 0 3 5 P 1 -1 3.9794 0.0 0.0 0.16893 0.0 0.0 1308.0710682361216 947.5040987604124 2255.575166996534 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.16893 - 7 + 1 2.291 39705.9 0.4600000083446502 5366 4520 9885 SUDHL4_400M_050219_1,9888 SUDHL4_400M_050219_1,9888, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9891 55.32 275.0 345210.0 25 0 64278.0 + 11607 GLADKVYFL 9 80 513.2870064730644 1024.5594600129286 2 513.2872192263603 MULTI CID FTMS 0 0 0 9890 186730.046875 0.2395092093836396 -5 0.0902976989746093 1 Unmodified _GLADKVYFL_ ENSG00000084774|ENST00000264705|CAD 55.50274090549119 0.0285720310785888 5 {[VA]|[{I|L}G]}ATAAVY{M(Oxidation (M))|F}{I|L} 10 3 + 82.362 0.0 0.0 8.0387 8.0387 88.393 0.0 0.0 0.0 18.89075625191822 15.026975159433531 15.026975159433531 3.0153844027245924 0 1.774227503252014 2.0 1.079689690656103 0.0 {[VA]|[{I|L}G]}ATAAVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ATAY{I|L}G{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[SG]VAVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ADKVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[SG]VY{I|L}G{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ATYA{I|L}G{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ATAAV{M(Oxidation (M))|F}Y{I|L};{[VA]|[{I|L}G]}[SG]YV{I|L}G{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AVAVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ATAA{M(Oxidation (M))|F}VY{I|L} 8.0387;7.7444;7.2663;7.1117;6.9719;6.8642;6.7912;6.5574;6.1949;6.1258 -;-;-;+;-;-;-;-;-;- + 2270 1 2.291 79021.6 1.0 5367 4522 9890 SUDHL4_400M_050219_1,9891 SUDHL4_400M_050219_1,9891,GLADKVYFL True True GLADKVYFL 55.319824 513.28721922636 6179575.0 9890.0 ENSG00000084774|ENST00000264705|CAD 6.585640589396159 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9892 55.326 319.0 337430.0 25 0 26746.0 + 43307 WLAEKLPTL 9 114 535.816247936835 1069.61794294047 2 535.8156616091728 MULTI CID FTMS 0 0 0 9890 111664.796875 0.2820707810062881 -5 0.0902976989746093 2 Unmodified _WLAEKLPTL_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 53.31671820480216 0.0330978755772958 5 W{I|L}AEK{I|L}PT{I|L} 9 0 + 78.789 0.0 0.0 7.3661 7.3661 95.134 0.0 0.0 0.0 57.19982029045326 14.838417964513582 14.838417964513582 13.794482255454524 0 1.024227503252014 2.0 1.1237125054200234 0.0 + + W{I|L}AEK{I|L}PT{I|L};W{I|L}{[TV]|[{I|L}S]}Q{I|L}PT{I|L};W{I|L}{[TV]|[{I|L}S]}[AG]{I|L}PT{I|L};W{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}RR[VP];W{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RV][RP] 7.3661;6.0764;5.2155;2.5147;2.2583 +;-;-;-;- + 715 + 1 2.291 86406.7 1.0 5368 4522 9890 SUDHL4_400M_050219_1,9892 SUDHL4_400M_050219_1,9892,WLAEKLPTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9895 55.342 609.0 209170.0 25 0 7474.8 + 29448 QLIDGILYA 9 134 1005.5614519893304 1004.5541755227304 1 1005.564379870892 MULTI CID FTMS 0 0 0 9894 86065.1953125 0.5352210686265432 2 -0.0396614074707031 1 Unmodified _QLIDGILYA_ ENSG00000115524|ENST00000335508|SF3B1 99.79894945604345 0.0109923542231827 5 [Q{I|L}]{I|L}DG{I|L}{I|L}YA 9 0 + 89.884 0.0 0.0 8.9476 8.9476 96.471 0.0 0.0 0.0 12.293451484414774 13.46787486224656 12.293451484414774 11.064921830680705 0 0.2887254899964357 1.3010299956639813 1.3441876774005248 1.9731975075880328 + + [Q{I|L}]{I|L}DG{I|L}{I|L}YA;[Q{I|L}]{I|L}DG{I|L}Y{I|L}A;[TP]S{I|L}Q{I|L}{I|L}YA;[Q{I|L}]GD{I|L}{I|L}{I|L}YA;[TP]SQ{I|L}{I|L}{I|L}YA;[PS]T{I|L}Q{I|L}{I|L}YA;[TP]S{I|L}AG{I|L}{I|L}YA;{[VA]|[{I|L}G]}D{I|L}Q{I|L}{I|L}YA;[PS]TQ{I|L}{I|L}{I|L}YA;[TP]S{I|L}Q{I|L}Y{I|L}A 8.9476;7.8461;7.7238;7.4289;7.4242;6.9873;6.9786;6.8418;6.6876;6.6224 +;-;-;-;-;-;-;-;-;- + 2587 1 2.291 87859.5 1.0 5369 4524 9894 SUDHL4_400M_050219_1,9895 SUDHL4_400M_050219_1,9895,QLIDGILYA True True QLIDGILYA 55.342497 1005.56437987089 1280661.0 9894.0 ENSG00000115524|ENST00000335508|SF3B1 5.585316975911458 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9896 55.352 511.0 44273.0 25 0 5164.5 -1 0 59 1065.8881973818095 0 1065.572192370892 PEAK CID FTMS 0 0 0 -1 0 2 5 {I|L} 1 -1 4.6041 0.0 0.0 0.21618 0.0 0.0 1461.5200338243633 552.1392916315061 2013.6593254558693 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.21618 - 1 + 1 2.291 24226.0 1.0 5370 4524 9894 SUDHL4_400M_050219_1,9896 SUDHL4_400M_050219_1,9896, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9897 55.365 778.0 91746.0 25 0 6359.4 -1 0 118 895.6909667849541 0 895.6909667849541 PEAK CID FTMS 0 0 0 -1 0 3 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.39062 0.0 0.0 1036.9743885486205 602.3042499606132 1639.2786385092336 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.39062 - 24 + 1 2.291 50437.3 1.0 5371 4524 9894 SUDHL4_400M_050219_1,9897 SUDHL4_400M_050219_1,9897, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9900 55.385 800.0 145610.0 25 0 18473.0 + 14805 ILEENIPVL 9 125 520.3052684444004 1038.5959839556008 2 520.3057128787041 MULTI CID FTMS 0 0 0 9899 76697.953125 0.4750865671127529 -1 0.0039443969726562 1 Unmodified _ILEENIPVL_ chr20:50830380-50876486|48|24.4|0.99|4.62|+|ENST00000445038|BCAS4,BCAS4;ENSG00000124243|ENST00000371608|BCAS4;ENST00000485049.1_1_20:49411653-49449308:+|nuORF;nc|ENSG00000124243|Q8TDM0-2|BCAS4;nc|ENSG00000124243|Q8TDM0-3|BCAS4;nc|ENSG00000124243|Q8TDM0|BCAS4 96.28474662873226 0.0124266067997264 5 {I|L}{I|L}ENE{I|L}P[{I|L}V] 9 2 + 68.258 0.0 0.0 6.5721 6.5721 87.073 0.0 0.0 0.0 4.445830421822663 5.642492736872597 4.445830421822663 4.445830421822663 0 0.8494850021680094 1.5228787452803376 0.8882104921644451 1.1549471895720984 {I|L}{I|L}ENE{I|L}P[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}EE{I|L}{I|L}P[{I|L}V];{I|L}{I|L}NEE{I|L}P[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}E{I|L}E{I|L}P[{I|L}V];{[QN]|[E{I|L}]|[KN]}NE{I|L}{I|L}P[{I|L}V];{[QN]|[E{I|L}]|[KN]}N{I|L}E{I|L}P[{I|L}V];{[QN]|[E{I|L}]|[KN]}{I|L}NE{I|L}P[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EE{I|L}P[{I|L}V];{I|L}{I|L}EEN{I|L}P[{I|L}V];{I|L}{I|L}EN{I|L}EP[{I|L}V] 6.5721;6.1441;6.0949;6.0458;5.8852;5.787;5.6691;5.4508;5.4343;5.4139 -;-;-;-;-;-;-;-;+;- + 1021 1 2.291 100113.7 0.449999988079071 5372 4526 9899 SUDHL4_400M_050219_1,9900 SUDHL4_400M_050219_1,9900,ILEENIPVL True True ILEENIPVL 55.385307 520.305712878704 717669.125 9899.0 chr20:50830380-50876486|48|24.4|0.99|4.62|+|ENST00000445038|BCAS4,BCAS4;;ENST00000485049.1_1_20:49411653-49449308:+|nuORF;;nc|ENSG00000124243|Q8TDM0-2|BCAS4;;ENSG00000124243|ENST00000371608|BCAS4;;nc|ENSG00000124243|Q8TDM0-3|BCAS4;;nc|ENSG00000124243|Q8TDM0|BCAS4 3.152368148167928 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9901 55.391 299.0 139720.0 25 0 35951.0 + 43309 WLAEKLPTL 9 37 1070.623564298572 1069.6162878319722 1 1070.628588855267 MULTI CID FTMS 0 0 0 9899 88070.4375 0.6381946109798077 -6 0.0984764099121093 2 Unmodified _WLAEKLPTL_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 15.738622578938676 0.4106572216562794 5 [W{I|L}]AEK{I|L} 6 3 35.138 0.0 0.0 3.2851 0.0 0.0 0.0 326.17022611806743 326.17022611806743 28.148350154927822 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 + [W{I|L}]AEK{I|L} 3.2851 + + 30 1 2.291 33300.6 1.0 5373 4526 9899 SUDHL4_400M_050219_1,9901 SUDHL4_400M_050219_1,9901,WLAEKLPTL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9902 55.405 800.0 111200.0 25 0 10117.0 + -1 ALASVIMGL 9 120 890.5000702176585 0 890.5004150271416 PEAK CID FTMS 0 0 0 9899 82626.9375 1.0 0 0.0 3 ENSG00000137713|ENST00000527614|PPP2R1B;ENSG00000105568|ENST00000322088|PPP2R1A;nc|ENSG00000137713|P30154-2|PPP2R1B;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-5|PPP2R1B 5 G{M(Oxidation (M))|F}{I|L}VS 5 -1 21.991 0.0 0.0 1.2361 0.0 0.0 1020.578801468717 252.13645349674064 1272.7152549654577 0.0 0.0 0.0 0.0 0 0.0 0.0 1.5994850021680094 0.0 G{M(Oxidation (M))|F}{I|L}VS 1.2361 - 917 + 1 2.291 61778.7 0.4699999988079071 5374 4526 9899 SUDHL4_400M_050219_1,9902 SUDHL4_400M_050219_1,9902, False False ALASVIMGL 55.404672 890.500415027142 1575326.0 9899.0 ENSG00000137713|ENST00000527614|PPP2R1B;;ENSG00000105568|ENST00000322088|PPP2R1A;;nc|ENSG00000137713|P30154-2|PPP2R1B;;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;;nc|ENSG00000137713|P30154-3|PPP2R1B;;nc|ENSG00000137713|P30154-5|PPP2R1B 6.432125886281331 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9906 55.429 800.0 35755.0 25 0 874.72 -1 0 66 825.0969726443291 0 825.0969726443291 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 26604.5 0.5699999928474426 5375 4529 9905 SUDHL4_400M_050219_1,9906 SUDHL4_400M_050219_1,9906, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9907 55.437 483.0 230350.0 25 0 25497.0 + 34458 SLYPSIMMA 9 110 1012.4840071568289 1011.4767306902288 1 1012.484545886517 MULTI CID FTMS 0 0 0 9905 122385.625 0.3844673743550717 -10 0.1826438903808593 2 Unmodified _SLYPSIMMA_ ENSG00000062822|ENST00000440232|POLD1 112.59319219568356 0.0043923200227745 5 [PS]{I|L}YS{I|L}MMA 9 2 + 76.311 0.0 0.0 7.5446 7.5446 89.977 0.0 0.0 0.0 5.50189682300784 14.973024840566469 5.50189682300784 5.50189682300784 0 0.9386218330464624 1.0457574905606752 2.7416440611282624 0.0 [PS]{I|L}YS{I|L}MMA;{[TV]|[{I|L}S]}YPS{I|L}MMA;{[TV]|[{I|L}S]}PYS{I|L}MMA;[PS]Y{I|L}S{I|L}MMA;[PS]{I|L}MT[YV]MA;[PS]{I|L}YSTHHA;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}S{I|L}MMA;[PS]{I|L}MM{[TV]|[{I|L}S]}YA;{[TV]|[{I|L}S]}PMT[YV]MA;[PS]{I|L}MT{I|L}M[YG] 7.5446;7.0006;6.9262;6.3597;6.1305;6.0231;5.7413;5.6166;5.5122;5.4891 -;+;-;-;-;-;-;-;-;- + 2583 1 2.291 78218.9 1.0 5376 4529 9905 SUDHL4_400M_050219_1,9907 SUDHL4_400M_050219_1,9907,SLYPSIMMA True True SLYPSIMMA 55.437299 1012.48454588652 4778604.5 9905.0 ENSG00000062822|ENST00000440232|POLD1 7.981756051381429 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9909 55.455 800.0 15832.0 25 0 1173.4 -1 0 31 1186.888506889977 0 1187.229907214642 PEAK CID FTMS 0 0 0 9908 26855.94921875 1.0 0 0.0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 19094.9 0.4600000083446502 5377 4530 9908 SUDHL4_400M_050219_1,9909 SUDHL4_400M_050219_1,9909, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9912 55.475 800.0 159050.0 25 0 21298.0 + 11741 GLIEILKKV 9 105 506.84178937522034 1011.6690258172408 2 506.8421508669853 MULTI CID FTMS 0 0 0 9911 78084.875 0.6022272891546157 -3 0.0466079711914062 1 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 85.64151623876279 0.0161498729896241 5 VA{I|L}E{I|L}{I|L}KKV 9 2 + 111.0 0.0 0.0 10.972 10.972 97.061 0.0 0.0 0.0 36.47817481888637 11.059837384595925 11.059837384595925 11.059837384595925 0 2.254432191740108 2.0 0.8494850021680094 0.2614393726401688 VA{I|L}E{I|L}{I|L}KKV;VA{I|L}E{I|L}{I|L}KVK;{[VA]|[{I|L}G]}{I|L}E{I|L}{I|L}KKV;{[VA]|[{I|L}G]}E{I|L}{I|L}{I|L}KKV;{[QN]|[E{I|L}]|[KN]}{I|L}G{I|L}{I|L}KKV;{[QN]|[E{I|L}]|[KN]}G{I|L}{I|L}{I|L}KKV;{[VA]|[{I|L}G]}{I|L}TVKV{I|L}AV;{I|L}{I|L}EG{I|L}{I|L}KKV;{[VA]|[{I|L}G]}{I|L}TVK{I|L}VAV;{I|L}{I|L}GE{I|L}{I|L}KKV 10.972;9.8785;6.0772;5.7065;5.3863;4.9147;4.6968;4.5509;4.5227;4.4501 -;-;+;-;-;-;-;-;-;- + 1269 + 1 2.291 100572.0 0.5099999904632568 5378 4532 9911 SUDHL4_400M_050219_1,9912 SUDHL4_400M_050219_1,9912,GLIEILKKV True True GLIEILKKV 55.475292 506.842150866985 919215.6875 9911.0 ENSG00000105185|ENST00000590247|PDCD5 6.1067516803741455 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9913 55.489 800.0 36534.0 25 0 5415.5 -1 0 63 1174.722582995892 0 1174.722582995892 PEAK CID FTMS 0 0 0 -1 0 2 5 Y 1 -1 6.9897 0.0 0.0 0.29776 0.0 0.0 1090.8161854236216 1090.501185589703 2181.3173710133246 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.29776 - 6 + 1 2.291 25595.8 0.550000011920929 5379 4532 9911 SUDHL4_400M_050219_1,9913 SUDHL4_400M_050219_1,9913, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9916 55.498 112.0 834900.0 25 0 156460.0 + 35697 SVFPRAVAL 9 69 480.2872929797293 958.5600330262586 2 480.2874023318291 MULTI CID FTMS 0 0 0 9915 575837.1875 0.7085552552504516 -5 0.0807075500488281 1 Unmodified _SVFPRAVAL_ REV__ENSG00000213903|ENST00000345363|LTB4R 37.97399986684836 0.0865783450051559 5 [VS]{M(Oxidation (M))|F}PRRM 7 -1 44.442 0.0 0.0 4.6363 0.0 0.0 0.0 82.0670412652953 82.0670412652953 29.837513372786475 0.0 0.0 0.0 0 0.968765315847925 2.0 0.0 0.805462187404089 [VS]{M(Oxidation (M))|F}PRRM 4.6363 - 78 + 1 2.291 76703.5 1.0 5380 4534 9915 SUDHL4_400M_050219_1,9916 SUDHL4_400M_050219_1,9916,SVFPRAVAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9919 55.517 734.0 159330.0 25 0 19440.0 + 33762 SLAQYLINA 9 124 496.77437095302815 991.5341889728564 2 496.7742797732353 MULTI CID FTMS 0 0 0 9918 101612.640625 0.4943135624397615 -2 0.0087127685546875 1 Unmodified _SLAQYLINA_ ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3 85.27202061508552 0.0162393975915471 5 {[TV]|[{I|L}S]}AQY{I|L} 6 3 52.201 0.0 0.0 5.2647 0.0 0.0 0.0 313.1506800219376 313.1506800219376 28.511493563484827 0.0 0.0 0.0 0 0.2887254899964357 2.0 1.7225210342440516 0.3494850021680094 + {[TV]|[{I|L}S]}AQY{I|L} 5.2647 + + 686 1 2.291 97431.0 1.0 5381 4536 9918 SUDHL4_400M_050219_1,9919 SUDHL4_400M_050219_1,9919,SLAQYLINA True True SLAQYLINA 55.517015 496.774279773235 1035638.9375 9918.0 nc|ENSG00000183570|P57721-5|PCBP3;;ENSG00000183570|ENST00000681687|PCBP3;;nc|ENSG00000183570|P57721-3|PCBP3;;nc|ENSG00000183570|P57721-2|PCBP3;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000183570|P57721-4|PCBP3 3.642563978830973 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9920 55.523 320.0 202500.0 25 0 10470.0 + 37612 TLLAGITGV 9 106 844.5139339207842 843.5066574541842 1 844.5121948122978 MULTI CID FTMS 0 0 0 9918 173051.53125 0.3874487881697628 12 -0.2567787170410156 2 Unmodified _TLLAGITGV_ ENSG00000165168|ENST00000378588|CYBB 136.33342141710068 0.015683453262119 5 [{I|L}T]{I|L}AG{I|L}TGV 9 0 + 95.952 0.0 0.0 11.375 11.375 93.286 0.0 0.0 0.0 32.8275703291412 71.51500398751118 32.8275703291412 7.012874368749067 0 1.8996498648046136 1.5228787452803376 1.665485531145061 0.0 + + [{I|L}T]{I|L}AG{I|L}TGV;[{I|L}T]GA{I|L}{I|L}TGV;[{I|L}T]{I|L}Q{I|L}TGV;[{I|L}T]Q{I|L}{I|L}TGV;[{I|L}T]{I|L}GA{I|L}TGV;[{I|L}T]{I|L}AGT{I|L}GV;[{I|L}T]G{I|L}A{I|L}TGV;[{I|L}T]GA{I|L}T{I|L}GV;[{I|L}T]{I|L}QT{I|L}GV;[{I|L}T]Q{I|L}T{I|L}GV 11.375;10.544;10.527;10.133;10.015;9.7943;9.2071;8.9629;8.9457;8.5518 +;-;-;-;-;-;-;-;-;- + 1177 1 2.291 47246.7 1.0 5382 4536 9918 SUDHL4_400M_050219_1,9920 SUDHL4_400M_050219_1,9920,TLLAGITGV True True TLLAGITGV 55.522867 844.512194812298 2208605.75 9918.0 ENSG00000165168|ENST00000378588|CYBB 8.290853182474772 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9921 55.537 800.0 372350.0 25 0 30675.0 + 34459 SLYPSIMMA 9 129 1012.4840071568289 1011.4767306902288 1 1013.485888659954 MULTI CID FTMS 0 0 0 9918 123295.9375 0.8488201246014168 -3 0.0126571655273437 3 Unmodified _SLYPSIMMA_ ENSG00000062822|ENST00000440232|POLD1 61.357469665136826 0.0253304979873734 5 {[TV]|[{I|L}S]}YPS{I|L}NM 8 2 29.224 0.0 0.0 2.8892 0.0 0.0 0.0 103.03039635077292 103.03039635077292 -2.211705446466489 0.0 -2.211705446466489 0.0 0 0.9802046884880936 1.3010299956639813 0.8979400086720376 0.0 {[TV]|[{I|L}S]}YPS{I|L}NM 2.8892 - 5537 1 2.291 189952.2 0.5899999737739563 5383 4536 9918 SUDHL4_400M_050219_1,9921 SUDHL4_400M_050219_1,9921,SLYPSIMMA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9923 55.546 283.0 236820.0 25 0 9260.8 + 37958 TMIVSLAAV 9 95 904.5178396951968 903.5105632285968 1 904.5168334841728 MULTI CID FTMS 0 0 0 9922 170239.296875 0.8785612654787013 -2 0.0388336181640625 1 Unmodified _TMIVSLAAV_ ENSG00000170540|ENST00000304414|ARL6IP1;nc|ENSG00000170540|Q15041-2|ARL6IP1 71.13359017698441 0.0206607516130725 5 [MT]{I|L}VS{I|L}AAV 9 0 + 60.466 0.0 0.0 6.6924 6.6924 84.864 0.0 0.0 0.0 4.771212547196626 16.478174818886373 4.771212547196626 2.167730834301061 0 0.5891368308784531 0.0 1.774227503252014 0.0 + + [MT]{I|L}VS{I|L}AAV;[MT]{I|L}SV{I|L}AAV;[MT]{I|L}VTVAAV;[MT]{I|L}S{I|L}VAAV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TVS{I|L}AAV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TSV{I|L}AAV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TVTVAAV;[MT]{I|L}VSA{I|L}AV;[MT]{I|L}VTAVAV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TS{I|L}VAAV 6.6924;6.4525;6.4425;6.2026;6.1643;5.9244;5.9144;5.8891;5.87;5.6745 +;-;-;-;-;-;-;-;-;- + 2509 1 2.291 50675.5 1.0 5384 4537 9922 SUDHL4_400M_050219_1,9923 SUDHL4_400M_050219_1,9923,TMIVSLAAV True True TMIVSLAAV 55.54584 904.516833484173 1098110.25 9922.0 ENSG00000170540|ENST00000304414|ARL6IP1;;nc|ENSG00000170540|Q15041-2|ARL6IP1 4.6768867174784345 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9924 55.56 800.0 41921.0 25 0 1522.8 -1 0 85 995.548712179978 0 995.2137328982352 PEAK CID FTMS 0 0 0 -1 0 2 5 DT{I|L}S 4 -1 19.781 0.0 0.0 0.9945 0.0 0.0 996.5983266042932 573.2742403619749 1569.872566966268 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 DT{I|L}S 0.9945 - 40 + 1 2.291 29728.3 0.3700000047683716 5385 4537 9922 SUDHL4_400M_050219_1,9924 SUDHL4_400M_050219_1,9924, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9927 55.57 208.0 327960.0 25 0 34947.0 + 20486 LLLDVPTAAV 10 98 506.30818503658367 1010.6018171399674 2 506.3080322146416 MULTI CID FTMS 0 0 0 9926 214955.921875 0.1775570568054384 -8 0.1084403991699218 1 Unmodified _LLLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 34.10243960390752 0.2198439752719791 5 {I|L}{I|L}DV{I|L} 5 6 32.447 0.0 0.0 3.2107 0.0 0.0 0.0 454.2304836084083 454.2304836084083 0.8382898095101226 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {I|L}{I|L}DV{I|L} 3.2107 - 469 1 2.291 58743.2 1.0 5386 4539 9926 SUDHL4_400M_050219_1,9927 SUDHL4_400M_050219_1,9927,LLLDVPTAAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9928 55.574 199.0 341330.0 25 0 49568.0 + 11608 GLADKVYFL 9 85 513.2870064730644 1024.5594600129286 2 513.2878906130791 MULTI CID FTMS 0 0 0 9926 211047.0 0.2706993382089515 12 -0.2498588562011718 2 Unmodified _GLADKVYFL_ ENSG00000084774|ENST00000264705|CAD 45.69961567697781 0.0497987121815769 5 {[VA]|[{I|L}G]}[SG]VVAY{M(Oxidation (M))|F}{I|L} 10 4 + 61.451 0.0 0.0 5.9978 5.9978 84.851 0.0 0.0 0.0 21.020599913279625 44.4612927932134 21.020599913279625 3.67931555708239 0 1.3783333568435268 2.0 1.055462187404089 0.0 {[VA]|[{I|L}G]}[SG]VVAY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[SG]VY{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}A[TA]VAY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}A[TA]Y{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[SG]VY{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{I|L};{[VA]|[{I|L}G]}A[TA]Y{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{I|L};{[VA]|[{I|L}G]}A[YT]A{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}A[YT][Q{I|L}]{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}A[YT]A{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{I|L};[Q{I|L}][TA]VAY{M(Oxidation (M))|F}{I|L} 5.9978;5.6387;5.4668;5.1077;4.8569;4.3258;4.1484;3.8047;3.3666;2.8548 -;-;-;-;-;-;-;-;-;- 631 1 2.291 55314.8 1.0 5387 4539 9926 SUDHL4_400M_050219_1,9928 SUDHL4_400M_050219_1,9928,GLADKVYFL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9929 55.588 800.0 145510.0 25 0 13454.0 + 34505 SMYDKVLML 9 123 550.2797492600946 1098.5449455869891 2 550.2805663943291 MULTI CID FTMS 0 0 0 9926 111120.59375 1.0 0 0.0 3 Unmodified _SMYDKVLML_ ENSG00000148308|ENST00000372097|GTF3C5;ENST00000485692.1_1_9:135919116-135919314:+|nuORF;nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5 40.23920728925047 0.0741434193262949 5 AATYV{I|L}MSM{I|L} 10 7 + 72.573 0.0 0.0 6.6063 6.6063 81.873 0.0 0.0 0.0 0.1548564655519868 0.1548564655519868 0.1548564655519868 0.1548564655519868 0 0.6861818737241735 0.0 1.2346368802282015 0.0 AATYV{I|L}MSM{I|L};{[MS]|[{M(Oxidation (M))|F}A]}YV{I|L}VGSM{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}YV{I|L}MSM{I|L};AATVY{I|L}MSM{I|L};{[YD]|[{M(Oxidation (M))|F}M]}KV{I|L}MSM{I|L};AATYVMS{I|L}M{I|L};AATYVM{I|L}SM{I|L};AATY{I|L}VMSM{I|L};{[MS]|[{M(Oxidation (M))|F}A]}YVV{I|L}GSM{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VY{I|L}MSM{I|L} 6.6063;6.5922;6.0117;5.9195;5.9026;5.5787;5.5346;5.4376;5.4235;5.3249 -;-;-;-;-;-;-;-;-;- 1117 1 2.291 92377.0 0.5199999809265137 5388 4539 9926 SUDHL4_400M_050219_1,9929 SUDHL4_400M_050219_1,9929,SMYDKVLML True True SMYDKVLML 55.587542 550.280566394329 522753.71875 9926.0 ENST00000485692.1_1_9:135919116-135919314:+|nuORF;;ENSG00000148308|ENST00000372097|GTF3C5;;nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5 4.260898033777873 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9931 55.596 236.0 369820.0 25 0 34215.0 + 43308 WLAEKLPTL 9 102 535.816247936835 1069.61794294047 2 535.8162109255791 MULTI CID FTMS 0 0 0 9930 213600.921875 0.5395664573177004 13 -0.2466201782226562 1 Unmodified _WLAEKLPTL_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 53.31671820480216 0.0330978755772958 5 W{I|L}AEK{I|L}PT{I|L} 9 0 + 74.968 0.0 0.0 7.0089 7.0089 96.542 0.0 0.0 0.0 48.04923814882558 14.837965668650028 14.837965668650028 62.04135284329227 0 0.9604093769761874 2.0 0.872363747448347 0.0 + + W{I|L}AEK{I|L}PT{I|L};[TP][KP]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}[PA] 7.0089;1.2085 +;- + 447 + 1 2.291 71926.0 1.0 5389 4540 9930 SUDHL4_400M_050219_1,9931 SUDHL4_400M_050219_1,9931,WLAEKLPTL True True WLAEKLPTL 55.595644 535.816210925579 6174534.8125 9930.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 6.669673760732015 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9932 55.601 284.0 228870.0 25 0 23578.0 + + 30144 RLLDYVVNI 9 67 552.824143147009 1103.6337333608178 2 552.8247558474541 MULTI CID FTMS 0 0 0 9930 99250.2265625 0.7682319982772872 -3 0.0506172180175781 2 Unmodified _QVNKLIYNI_ ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2 28.486842064014134 0.1687311288560894 5 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVN{I|L} 9 -1 + 53.038 0.0 0.0 4.8057 4.8057 86.44 0.0 0.0 0.0 10.03469351593509 40.81932811061336 10.03469351593509 9.208187539523747 0 0.805462187404089 0.0 0.2614393726401688 0.3494850021680094 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVGG{I|L} 4.8057;3.9714 -;- 61 1 2.291 62081.9 1.0 5390 4540 9930 SUDHL4_400M_050219_1,9932 SUDHL4_400M_050219_1,9932,QVNKLIYNI False False RLLDYVVNI 55.600889 552.824755847454 965875.6875 9930.0 ENSG00000197256|ENST00000586659|KANK2;;nc|ENSG00000197256|Q63ZY3-3|KANK2;;nc|ENSG00000197256|Q63ZY3-2|KANK2 6.062961101531982 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9933 55.606 298.0 194220.0 25 0 28963.0 + 9423 FLADPSAFV 9 65 966.4907911876984 965.4835147210983 1 966.4910766482352 MULTI CID FTMS 0 0 0 9930 238573.84375 0.251193242782157 13 -0.2466201782226562 3 Unmodified _FLADPSAFV_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000496593.5_1_11:61404148-61405105:+|nuORF;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 81.61307344734483 0.0171259190214613 5 [PS]A{M(Oxidation (M))|F}{I|L}DA{M(Oxidation (M))|F}V 9 5 + 72.625 0.0 0.0 7.5221 7.5221 85.032 0.0 0.0 0.0 16.557394351444316 53.69407250205317 16.557394351444316 1.1263423094075478 0 0.2887254899964357 0.0 2.466551424848872 0.0 [PS]A{M(Oxidation (M))|F}{I|L}DA{M(Oxidation (M))|F}V;[PS]A{M(Oxidation (M))|F}D{I|L}A{M(Oxidation (M))|F}V;[PS]A{M(Oxidation (M))|F}DA{I|L}{M(Oxidation (M))|F}V;[PS]A{M(Oxidation (M))|F}VEA{M(Oxidation (M))|F}V;[PS]ADA{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}V;[PS]AD{M(Oxidation (M))|F}{I|L}A{M(Oxidation (M))|F}V;[PS]AD{M(Oxidation (M))|F}A{I|L}{M(Oxidation (M))|F}V;[PS]A{M(Oxidation (M))|F}{I|L}W{M(Oxidation (M))|F}V;[PS]A{M(Oxidation (M))|F}{I|L}D{M(Oxidation (M))|F}AV;[PS]A{M(Oxidation (M))|F}{I|L}AD{M(Oxidation (M))|F}V 7.5221;7.4054;7.4008;7.0936;7.0553;6.9054;6.9008;6.8465;6.7831;6.7115 -;-;-;-;-;-;-;-;-;- 981 1 2.291 46518.2 1.0 5391 4540 9930 SUDHL4_400M_050219_1,9933 SUDHL4_400M_050219_1,9933,FLADPSAFV True True FLADPSAFV 55.606385 966.491076648235 5221216.5 9930.0 ENST00000496593.5_1_11:61404148-61405105:+|nuORF;;ENSG00000089157|ENST00000392514|RPLP0;;nc|ENSG00000213553|Q8NHW5|RPLP0P6;;nc|ENSG00000089157|P05388-2|RPLP0 6.500403086344401 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9934 55.62 800.0 203270.0 25 0 113480.0 16161 IVADLYLK 8 75 934.5607985917172 933.5535221251172 1 934.5612670779228 MULTI CID FTMS 0 0 0 9930 81207.6640625 0.5048445171626856 5 -0.0979423522949218 4 Unmodified _IVADLYLK_ nc|ENSG00000291014|Q9Y6N3|CLCA3P 4.75600775471527 0.7954636275367004 5 D 1 7 5.4846 0.0 0.0 0.58749 0.0 0.0 535.3355483475767 280.1649569147094 815.5005052622862 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.58749 + + 2 + 1 2.291 117942.6 0.8199999928474426 5392 4540 9930 SUDHL4_400M_050219_1,9934 SUDHL4_400M_050219_1,9934,IVADLYLK False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 9937 55.64 800.0 51470.0 25 0 2486.3 -1 0 95 1056.5110229030008 0 1056.359545886517 PEAK CID FTMS 0 0 0 9936 10595.3828125 0.1131929317400739 -5 0.0870780944824218 1 5 {I|L}E 2 -1 19.464 0.0 0.0 0.92202 0.0 0.0 1683.799480020079 182.0577791803344 1865.8572592004127 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {I|L}E 0.92202 - 175 + 1 2.291 35133.0 0.6499999761581421 5393 4542 9936 SUDHL4_400M_050219_1,9937 SUDHL4_400M_050219_1,9937, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9938 55.644 169.0 29624.0 25 0 2996.0 -1 0 15 1114.294116199017 0 1114.294116199017 PEAK CID FTMS 0 0 0 -1 0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 15292.4 1.0 5394 4542 9936 SUDHL4_400M_050219_1,9938 SUDHL4_400M_050219_1,9938, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9941 55.664 800.0 43406.0 25 0 2028.0 -1 0 89 1144.9750426360597 0 1144.642138659954 PEAK CID FTMS 0 0 0 9940 18424.234375 0.7394014859972612 1 -0.0380516052246093 1 5 N 1 -1 6.9897 0.0 0.0 0.3055 0.0 0.0 1507.9415270672378 662.9339083307249 2170.8754353979625 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.3055 - 2 + 1 2.291 27612.2 0.6600000262260437 5395 4544 9940 SUDHL4_400M_050219_1,9941 SUDHL4_400M_050219_1,9941, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9942 55.669 305.0 320460.0 25 0 22556.0 + 2435 AQSELDIYL 9 100 1051.529727173762 1050.522450707162 1 1051.526171863079 MULTI CID FTMS 0 0 0 9940 195363.125 0.4712745169802192 -5 0.083831787109375 2 Unmodified _AQSELDIYL_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 66.45667989310934 0.0225072657982126 5 {[ES]|[DT]|[{I|L}C]}{I|L}DQA{I|L}Y{I|L} 9 4 + 78.312 0.0 0.0 7.4545 7.4545 85.784 0.0 0.0 0.0 1.7609125905568137 16.478174818886373 1.7609125905568137 1.7609125905568137 0 0.3494850021680094 0.0 2.234636880228201 0.6307196863200843 {[ES]|[DT]|[{I|L}C]}{I|L}DQA{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}TDQA{I|L}Y{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}D{I|L}AQY{I|L};{NN|[MP]|[D{I|L}]|[EV]}TDAGA{I|L}Y{I|L};[QA]{I|L}DTD{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}TD{I|L}AQY{I|L};[QA]SE{I|L}D{I|L}Y{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}DAQ{I|L}Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}TDAQ{I|L}Y{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}AQD{I|L}Y{I|L} 7.4545;7.2869;7.2463;7.1759;7.1529;7.0787;7.0059;6.9677;6.8001;6.7989 -;-;-;-;-;-;+;-;-;- + 5233 1 2.291 68942.0 1.0 5396 4544 9940 SUDHL4_400M_050219_1,9942 SUDHL4_400M_050219_1,9942,AQSELDIYL True True AQSELDIYL 55.669264 1051.52617186308 2468527.0 9940.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 4.304259777069092 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9943 55.679 567.0 151750.0 25 0 27321.0 + 9751 FMLPDPQNI 9 81 1074.528657973629 1073.521381507029 1 1074.531909167767 MULTI CID FTMS 0 0 0 9940 117344.1015625 0.5638913235255582 -14 0.2099380493164062 3 Unmodified _FMLPDPQNI_ ENSG00000198860|ENST00000645668|TSEN15;ENST00000423257.1_1_17:17360441-17360570:+|nuORF;ENST00000485209.5_1_1:184027321-184041978:+|nuORF 75.76082778847304 0.0188720312721366 5 PDP{I|L}{M(Oxidation (M))|F}{I|L} 6 5 54.201 0.0 0.0 5.0489 0.0 0.0 373.197069236525 0.0 373.197069236525 0.0 29.01863755803668 0.0 0.0 0 1.3494850021680094 0.0 0.6549471895720985 0.0 PDP{I|L}{M(Oxidation (M))|F}{I|L} 5.0489 - 554 1 2.291 63100.8 1.0 5397 4544 9940 SUDHL4_400M_050219_1,9943 SUDHL4_400M_050219_1,9943,FMLPDPQNI True True FMLPDPQNI 55.679251 1074.53190916777 1815063.25 9940.0 ENSG00000198860|ENST00000645668|TSEN15;;ENST00000423257.1_1_17:17360441-17360570:+|nuORF;;ENST00000485209.5_1_1:184027321-184041978:+|nuORF 7.861890951792399 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9944 55.685 342.0 199120.0 25 0 9173.1 + -1 TLDDIMAAV 9 102 948.4703613406444 0 948.4670898318292 PEAK CID FTMS 0 0 0 9940 80584.8046875 0.3504285174209077 -3 0.0272254943847656 4 ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-7|ANKRD17;ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17 5 AAM{I|L}DD 6 -1 38.581 0.0 0.0 2.036 0.0 0.0 1064.5403187732825 211.10987268619377 1275.650191459476 0.0 0.0 0.0 0.0 0 0.0 0.0 2.4247425010840047 0.0 AAM{I|L}DD 2.036 - 2120 + 1 2.291 48440.1 1.0 5398 4544 9940 SUDHL4_400M_050219_1,9944 SUDHL4_400M_050219_1,9944, False False TLDDIMAAV 55.685462 948.467089831829 1417315.5 9940.0 ENST00000514252.1_1_4:73978989-74017230:-|nuORF;;nc|ENSG00000132466|O75179-7|ANKRD17;;ENSG00000132466|ENST00000358602|ANKRD17;;nc|ENSG00000132466|O75179-3|ANKRD17 7.341799894968669 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9946 55.699 579.0 32434.0 25 0 993.58 -1 0 53 1128.096240222454 0 1128.096240222454 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 20209.0 1.0 5399 4545 9945 SUDHL4_400M_050219_1,9946 SUDHL4_400M_050219_1,9946, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9947 55.707 445.0 310510.0 25 0 69125.0 + 14782 ILDPHVVLL 9 101 509.81846631064377 1017.6223796880876 2 509.8188964724541 MULTI CID FTMS 0 0 0 9945 88274.8671875 0.149561889637476 -6 0.1218833923339843 2 Unmodified _ILDPHVVLL_ ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF 44.40701690623563 0.0526327925666318 5 [HV]PV{I|L}EV{I|L}{I|L} 9 6 + 46.348 0.0 0.0 4.5546 4.5546 78.199 0.0 0.0 0.0 6.60650842086838 9.789011601027724 6.60650842086838 1.7609125905568137 0 0.3494850021680094 1.0969100130080565 0.0 0.0 [HV]PV{I|L}EV{I|L}{I|L};[HV]PVE{I|L}V{I|L}{I|L};[HV]PD{I|L}{I|L}V{I|L}{I|L};[HV]PV{I|L}D{I|L}{I|L}{I|L};[HV]PVD{I|L}{I|L}{I|L}{I|L};[HV]PVEV{I|L}{I|L}{I|L};[HV]VP{I|L}EV{I|L}{I|L};[HV]PDV{I|L}{I|L}{I|L}{I|L};[HV]PD{I|L}V{I|L}{I|L}{I|L};[HV]VPE{I|L}V{I|L}{I|L} 4.5546;4.3815;4.3426;4.2587;4.0857;4.0857;4.0857;4.0468;4.0468;3.9127 -;-;-;-;-;-;-;-;-;- 1568 1 2.291 112190.8 1.0 5400 4545 9945 SUDHL4_400M_050219_1,9947 SUDHL4_400M_050219_1,9947,ILDPHVVLL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9948 55.716 522.0 30394.0 25 0 1376.3 -1 0 46 1111.025805652142 0 1111.025805652142 PEAK CID FTMS 0 0 0 -1 0 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 21027.4 1.0 5401 4545 9945 SUDHL4_400M_050219_1,9948 SUDHL4_400M_050219_1,9948, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9951 55.737 800.0 97139.0 25 0 11203.0 + -1 LLEMITTNV 9 102 525.2815973628374 1048.5486417924749 2 525.2823974490166 MULTI CID FTMS 0 0 0 9950 77470.265625 0.6655232544014213 1 -0.0383987426757812 1 Oxidation (M) _LLEM(Oxidation (M))ITTNV_ REV__ENSG00000141127|ENST00000268835|PRPSAP2;REV__nc|ENSG00000141127|O60256-2|PRPSAP2;REV__nc|ENSG00000141127|O60256-3|PRPSAP2 20.453626601364224 0.2830276176381075 5 {I|L}{I|L}{I|L}D 4 -1 42.384 0.0 0.0 4.0421 0.0 0.0 0.0 591.2476900690061 591.2476900690061 16.977437731477423 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}{I|L}D 4.0421 - 235 + 1 2.291 65629.2 0.5600000023841858 5402 4547 9950 SUDHL4_400M_050219_1,9951 SUDHL4_400M_050219_1,9951,LLEMITTNV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9952 55.75 800.0 88989.0 25 0 4710.6 -1 KCKRRWRSCER 11 129 811.4150126751006 0 811.7681762576103 PEAK CID FTMS 0 0 0 -1 0 2 2 Carbamidomethyl (C) _KC(Carbamidomethyl (C))KRRWRSC(Carbamidomethyl (C))ER_ ENST00000481848.6_2_6:127836176-127837095:-|nuORF 0.3070304955306653 0.4761840153648598 5 V{I|L}V 3 -1 9.9215 0.0 0.0 0.61213 0.0 0.0 997.4146067937572 309.15818201236567 1306.572788806123 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}V 0.61213 - 151 + 1 2.291 51122.5 0.550000011920929 5403 4547 9950 SUDHL4_400M_050219_1,9952 SUDHL4_400M_050219_1,9952,KCKRRWRSCER False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 9953 55.759 478.0 144110.0 25 0 34066.0 11455 GIFDDPPAL 9 111 944.4718026061064 943.4645261395062 1 944.4700195193292 MULTI CID FTMS 0 0 0 9950 90895.2421875 1.0 0 0.0 3 Unmodified _GIFDDPPAL_ ENSG00000164754|ENST00000297338|RAD21 28.486842064014134 0.1687311288560894 5 [DP][PA][YT]PA{I|L} 9 6 + 31.936 0.0 0.0 3.385 3.385 79.945 0.0 0.0 0.0 4.717554522391353 22.23628654999466 4.717554522391353 6.596179526897053 0 0.5 1.0457574905606752 0.2887254899964357 0.0 [DP][PA][YT]PA{I|L};[PS]V{I|L}D[WD]{I|L};[PA]PD[YT]PA{I|L};[PS]V{I|L}{[CP]|[EA]}{[ES]|[DT]|[{I|L}C]}{I|L};[PG][EP][YT]PA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}H]|[RQ]}[WD]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[{M(Oxidation (M))|F}H]|[RQ]}DDA{I|L};{[VA]|[{I|L}G]}G{[{M(Oxidation (M))|F}H]|[RQ]}[WD]{I|L};[PA]P[{M(Oxidation (M))|F}V]DDA{I|L};{[VA]|[{I|L}G]}G{[{M(Oxidation (M))|F}H]|[RQ]}DDA{I|L} 3.385;2.6858;2.482;1.1984;1.1327;0.76689;0.6215;0.55054;0.48336;0.4124 -;-;-;-;-;-;-;-;-;- 113 1 2.291 48388.0 1.0 5404 4547 9950 SUDHL4_400M_050219_1,9953 SUDHL4_400M_050219_1,9953,GIFDDPPAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9955 55.766 180.0 514960.0 25 0 97055.0 + 35698 SVFPRAVAL 9 75 480.2872929797293 958.5600330262586 2 480.2872802615166 MULTI CID FTMS 0 0 0 9954 292219.6875 0.3595700308357902 9 -0.1046638488769531 1 Unmodified _SVFPRAVAL_ REV__ENSG00000213903|ENST00000345363|LTB4R 37.97399986684836 0.0865783450051559 5 [VS]{M(Oxidation (M))|F}{I|L}[{I|L}T]GQ 8 -1 51.213 0.0 0.0 5.3427 0.0 0.0 0.0 110.0616930597289 110.0616930597289 32.7961586650507 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.3807196863200844 0.8494850021680094 [VS]{M(Oxidation (M))|F}{I|L}[{I|L}T]GQ 5.3427 - 106 + 1 2.291 77425.0 1.0 5405 4548 9954 SUDHL4_400M_050219_1,9955 SUDHL4_400M_050219_1,9955,SVFPRAVAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9956 55.78 800.0 71724.0 25 0 3586.1 -1 0 120 930.7350739904184 0 930.3103515505792 PEAK CID FTMS 0 0 0 -1 0 2 5 S 1 -1 3.9794 0.0 0.0 0.21401 0.0 0.0 1637.3548698052523 132.04596887760002 1769.4008386828525 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.21401 - 27 + 1 2.291 39623.7 0.449999988079071 5406 4548 9954 SUDHL4_400M_050219_1,9956 SUDHL4_400M_050219_1,9956, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9959 55.8 800.0 261300.0 25 0 26366.0 + 14784 ILDPHVVLL 9 109 1018.6285374771576 1017.6212610105576 1 1018.63048094511 MULTI CID FTMS 0 0 0 9958 106880.71875 0.4026547182721527 -6 0.1359443664550781 1 Unmodified _ILDPHVVLL_ ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF 39.957323273325 0.0756908302845263 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}EV{I|L}{I|L} 9 6 + 57.669 0.0 0.0 5.667 5.667 83.039 0.0 0.0 0.0 6.989700043360188 16.478174818886373 6.989700043360188 3.0102999566398125 0 0.3054621874040891 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}EV{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}D{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}{I|L}D{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVE{I|L}V{I|L}{I|L};[HV]PV{I|L}EV{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}VEV{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VD{I|L}{I|L}V{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVEV{I|L}{I|L}{I|L};[HV]PV{I|L}D{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}VD{I|L}{I|L}{I|L} 5.667;5.3712;5.276;4.9802;4.9802;4.9024;4.7808;4.6843;4.6843;4.6065 -;-;-;-;-;-;-;-;-;- 2489 1 2.291 140048.0 0.7200000286102295 5407 4550 9958 SUDHL4_400M_050219_1,9959 SUDHL4_400M_050219_1,9959,ILDPHVVLL True True ILDPHVVLL 55.799588 1018.63048094511 7787535.5 9958.0 ENST00000574867.5_1_17:5292093-5322970:-|nuORF;;ENSG00000108559|ENST00000573584|NUP88 5.969679435094197 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9960 55.813 800.0 137920.0 25 0 23697.0 20435 LLIFTEGAAV 10 97 517.2989573160436 1032.583361698887 2 517.2991210818291 MULTI CID FTMS 0 0 0 9958 111362.921875 0.9690095411837693 4 -0.0547332763671875 2 Unmodified _LLIFTEGAAV_ ENSG00000165204|ENST00000277309|OR1K1 30.63653989081413 0.2803493085145199 5 {I|L}{I|L}{I|L}DV[YQ]AV 9 5 + 82.189 0.0 0.0 7.9596 7.9596 90.052 0.0 0.0 0.0 36.47817481888637 9.449911167586478 9.449911167586478 4.771212547196626 0 1.5356668758921828 2.0 0.0 0.0 {I|L}{I|L}{I|L}DV[YQ]AV;{I|L}{I|L}VEV[YQ]AV;{I|L}{I|L}{I|L}DV[YQ]G{I|L};{I|L}{I|L}VEV[YQ]G{I|L};{I|L}{I|L}{I|L}C(Carbamidomethyl (C))[HK]H{I|L};{I|L}{I|L}{I|L}[CG][HK]H{I|L};{I|L}CP[{I|L}P][Q{I|L}]H{I|L} 7.9596;7.4975;7.0444;6.5824;5.8778;4.9808;0.79879 -;-;-;-;-;-;- 345 + 1 2.291 87378.0 0.5299999713897705 5408 4550 9958 SUDHL4_400M_050219_1,9960 SUDHL4_400M_050219_1,9960,LLIFTEGAAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9962 55.82 193.0 900910.0 25 0 48665.0 + + 1844 ALTPVVVTL 9 115 912.5767592373855 911.5694827707856 1 912.5766479372978 MULTI CID FTMS 0 0 0 9961 495370.90625 0.1545757350521142 12 -0.1427879333496093 1 Unmodified _ALTVVPSII_ ENSG00000135446|ENST00000257904|CDK4;nc|ENSG00000135446|P11802-2|CDK4 92.8221339359638 0.0138398038803217 5 [VP]VVSVVT{I|L} 9 -1 + 85.94 0.0 0.0 9.4277 9.4277 85.744 0.0 0.0 0.0 17.42000749547161 14.973024840566469 14.973024840566469 0.2781497188692157 0 0.4247425010840047 1.6989700043360187 1.610924374808178 0.0 [VP]VVSVVT{I|L};[VP]VVTA{I|L}T{I|L};[VP]VTVA{I|L}T{I|L};[VP]TVVA{I|L}T{I|L};[VP]VVT{I|L}AT{I|L};[VP]VVAT{I|L}T{I|L};[VP]VTA{I|L}VT{I|L};[VP]VTV{I|L}AT{I|L};[VP]TVA{I|L}VT{I|L};[VP]VAT{I|L}VT{I|L} 9.4277;9.3972;9.067;8.8064;8.6768;8.557;8.4321;8.3465;8.1716;8.1019 -;-;-;-;-;-;-;-;-;- 5185 1 2.291 118839.2 1.0 5409 4551 9961 SUDHL4_400M_050219_1,9962 SUDHL4_400M_050219_1,9962,ALTVVPSII False False ALTPVVVTL 55.819538 912.576647937298 18570502.0 9961.0 ENSG00000135446|ENST00000257904|CDK4;;nc|ENSG00000135446|P11802-2|CDK4 6.093376636505127 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9963 55.83 579.0 134450.0 25 0 25268.0 + 36611 TAPPRRALG 9 92 938.5558724990202 937.5485960324202 1 938.557177722454 MULTI CID FTMS 0 0 0 9961 65314.6640625 0.4022549879168722 -9 0.1894569396972656 2 Unmodified _TAPPRRALG_ REV__ENST00000417456.1_1_1:35442444-35442927:-|nuORF 14.838274106304384 0.4350285940865338 5 DVPTAAV 7 -1 66.274 0.0 0.0 7.0688 0.0 0.0 266.20002944160314 0.0 266.20002944160314 0.0 59.82016661481893 0.0 0.0 0 0.8494850021680094 0.0 0.7302046884880937 0.0 DVPTAAV 7.0688 - 37 1 2.291 56780.0 1.0 5410 4551 9961 SUDHL4_400M_050219_1,9963 SUDHL4_400M_050219_1,9963,TAPPRRALG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9965 55.834 84.0 431000.0 25 0 34789.0 + 20487 LLLDVPTAAV 10 72 506.30818503658367 1010.6018171399674 2 506.3082458376884 MULTI CID FTMS 0 0 0 9964 341383.75 0.2819884809986865 5 -0.0338478088378906 1 Unmodified _LLLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 26.88365393820708 0.3646707531412818 5 {I|L}{I|L}DV{I|L} 5 6 34.666 0.0 0.0 3.4302 0.0 0.0 0.0 454.2293555523299 454.2293555523299 14.488474775526186 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {I|L}{I|L}DV{I|L} 3.4302 - 104 1 2.291 30486.4 1.0 5411 4552 9964 SUDHL4_400M_050219_1,9965 SUDHL4_400M_050219_1,9965,LLLDVPTAAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9968 55.856 800.0 76990.0 25 0 5527.2 -1 0 111 921.2088129077902 0 921.0971557497978 PEAK CID FTMS 0 0 0 9967 36129.32421875 1.0 0 0.0 1 5 S 1 -1 6.9897 0.0 0.0 0.37979 0.0 0.0 1618.3029885091364 132.0459383600219 1750.3489268691585 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.37979 - 7 + 1 2.291 44321.8 0.5099999904632568 5412 4554 9967 SUDHL4_400M_050219_1,9968 SUDHL4_400M_050219_1,9968, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9972 55.874 487.0 103920.0 25 0 3510.5 + 34330 SLSESWYNL 9 100 1098.510135868714 1097.502859402114 1 1098.506152331829 MULTI CID FTMS 0 0 0 9971 121583.8359375 0.5788110866758829 9 -0.1320152282714843 1 Unmodified _SLSESWYNL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;ENST00000538470.2_1_11:61067610-61070684:-|nuORF;ENST00000545894.1_1_11:61069637-61069871:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1 58.6788170122104 0.0268135626297836 5 DYWS 4 8 34.412 0.0 0.0 3.1355 0.0 0.0 148.11444495074517 395.15839563541255 543.2728405861577 0.0 0.0 0.0 0.0 0 0.0 0.0 1.6989700043360187 0.0 DYWS 3.1355 - 738 + 1 2.291 36780.4 1.0 5413 4557 9971 SUDHL4_400M_050219_1,9972 SUDHL4_400M_050219_1,9972,SLSESWYNL True True SLSESWYNL 55.874388 1098.50615233183 969369.625 9971.0 ENST00000545894.1_1_11:61069637-61069871:-|nuORF;;ENSG00000167986|ENST00000301764|DDB1;;nc|ENSG00000167986|Q16531-2|DDB1;;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;;ENST00000538470.2_1_11:61067610-61070684:-|nuORF 3.2748714288075766 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9973 55.888 800.0 163900.0 25 0 16342.0 + 17220 KLLEYIEEI 9 124 575.3240621318188 1148.6335713304377 2 575.3238403201103 MULTI CID FTMS 0 0 0 9971 91120.3984375 0.750187974543262 -8 0.0836906433105468 2 Unmodified _KLLEYIEEI_ ENSG00000072571|ENST00000393915|HMMR;nc|ENSG00000072571|O75330-2|HMMR;nc|ENSG00000072571|O75330-4|HMMR;nc|ENSG00000072571|O75330|HMMR 53.31671820480216 0.0330978755772958 5 {[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L} 9 4 + 86.812 0.0 0.0 7.5578 7.5578 84.768 0.0 0.0 0.0 0.8103844862777976 16.478174818886373 0.8103844862777976 0.8103844862777976 0 0.7134679910804405 0.7958800173440752 1.7104093769761874 0.0 {[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L};[Y{I|L}]E{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KY{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}YK{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}KE{I|L}E{I|L};[Y{I|L}]E{I|L}KE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KYE{I|L}E{I|L};[K{I|L}]{I|L}EY{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}YKE{I|L}E{I|L};{I|L}{I|L}KEY{I|L}EE{I|L} 7.5578;7.4873;7.2808;6.9493;6.911;6.8404;6.6339;6.4967;6.3025;6.0936 -;-;-;-;-;-;-;+;-;- + 2602 1 2.291 98645.8 0.4600000083446502 5414 4557 9971 SUDHL4_400M_050219_1,9973 SUDHL4_400M_050219_1,9973,KLLEYIEEI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9974 55.902 800.0 38735.0 25 0 3890.7 -1 0 73 1062.077075183392 0 1062.077075183392 PEAK CID FTMS 0 0 0 -1 0 3 5 E{I|L}{M(Oxidation (M))|F} 3 -1 13.188 0.0 0.0 0.62143 0.0 0.0 1248.7042469470591 481.22068201236567 1729.9249289594247 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E{I|L}{M(Oxidation (M))|F} 0.62143 - 17 + 1 2.291 26525.4 0.6000000238418579 5415 4557 9971 SUDHL4_400M_050219_1,9974 SUDHL4_400M_050219_1,9974, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9975 55.909 354.0 68353.0 25 0 3373.9 8037 ENKEFLEF 8 44 1055.5050244566094 1054.4977479900094 1 1055.831469714642 MULTI CID FTMS 0 0 0 9971 55374.8984375 0.5897949476913829 5 -0.0764732360839843 4 Unmodified _ENKEFLEF_ ENSG00000146729|ENST00000322090|NIPSNAP2 32.30548876998284 0.3644845974844379 5 {[QN]|[E{I|L}]|[KN]}EE{M(Oxidation (M))|F}{I|L}E{M(Oxidation (M))|F} 8 2 + 47.669 0.0 0.0 4.5205 4.5205 82.172 0.0 0.0 0.0 9.336068845642204 32.7034898570674 9.336068845642204 5.728050365394424 0 0.0 0.0 1.6549471895720984 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}EE{M(Oxidation (M))|F}{I|L}E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}[YG]{I|L}E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[YG]{[QG]|[NA]}{I|L}E{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}AM{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}AP{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}E[VS]{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[QG]|[NA]}E{I|L}[YG]{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[WQ][VS]{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[WQ]{I|L}[YG]{M(Oxidation (M))|F} 4.5205;3.9773;3.8563;3.1384;3.1384;3.0724;2.6696;2.4581;2.0553 -;-;-;-;-;-;-;-;- 168 1 2.291 25550.4 1.0 5416 4557 9971 SUDHL4_400M_050219_1,9975 SUDHL4_400M_050219_1,9975,ENKEFLEF False True FSVEGQLEF 55.908523 1055.83146971464 2564713.75 9971.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1;;nc|ENSG00000183199|Q58FF7|HSP90AB3P;;nc|ENSG00000205100|Q58FG1|HSP90AA4P;;ENST00000378770.1_1_4:190394307-190396341:+|nuORF 3.0904808839162192 1.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9978 55.918 144.0 145760.0 25 0 5609.2 + 44182 YLEQIYTY 8 52 1092.5250726101128 1091.517796143513 1 1094.532885730267 MULTI CID FTMS 0 0 0 9977 187143.0625 0.6545632965994959 4 -0.0436477661132812 1 Unmodified _YLEQIYTY_ REV__ENSG00000214872|ENST00000527972|SMTNL1 4.75600775471527 0.7954636275367004 5 [Y{I|L}][Q{I|L}]E{M(Oxidation (M))|F}T 7 -1 8.2045 0.0 0.0 0.75166 0.0 0.0 0.0 194.0593360207192 194.0593360207192 1.7508318932272733 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [Y{I|L}][Q{I|L}]E{M(Oxidation (M))|F}T 0.75166 - 43 1 2.291 21096.1 1.0 5417 4559 9977 SUDHL4_400M_050219_1,9978 SUDHL4_400M_050219_1,9978,YLEQIYTY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9979 55.932 800.0 69729.0 25 0 4056.7 + -1 ALADDDFLTV 10 92 1079.5253650441582 0 1079.530444324017 PEAK CID FTMS 0 0 0 9977 35613.37890625 0.4184237478622217 1 -0.0193290710449218 2 ENSG00000104738|ENST00000649973|MCM4 5 VT{I|L}AD{I|L}AD 8 -1 46.808 0.0 0.0 2.17 0.0 0.0 1096.526178674928 259.07331262760005 1355.599491302528 0.0 0.0 0.0 0.0 0 0.0 0.0 1.372363747448347 0.0 VT{I|L}AD{I|L}AD 2.17 - 3535 + 1 2.291 44057.8 0.5899999737739563 5418 4559 9977 SUDHL4_400M_050219_1,9979 SUDHL4_400M_050219_1,9979, False False ALADDDFLTV 55.93174 1079.53044432402 1003805.625 9977.0 ENSG00000104738|ENST00000649973|MCM4 3.829253832499186 1.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9983 55.956 800.0 169410.0 25 0 9125.3 + + 12528 ASSPGILVL 9 129 856.5140373127855 855.5067608461854 1 856.5135375857353 MULTI CID FTMS 0 0 0 9982 66535.6875 0.1807112094757314 15 -0.18701171875 1 Unmodified _GVGLEGIVL_ nc|ENSG00000102606|Q14155-2|ARHGEF7;nc|ENSG00000102606|Q14155-6|ARHGEF7;ENST00000483189.1_1_13:111893629-111928079:+|nuORF;nc|ENSG00000102606|Q14155-1|ARHGEF7;nc|ENSG00000102606|Q14155-5|ARHGEF7;nc|ENSG00000102606|Q14155|ARHGEF7;nc|ENSG00000102606|Q14155-3|ARHGEF7;ENSG00000102606|ENST00000646102|ARHGEF7 30.22481116460888 0.1466181017706357 5 [PG]{I|L}S{[SA]|[TG]}{I|L}V{I|L} 9 -1 + 41.401 0.0 0.0 4.8393 4.8393 81.512 0.0 0.0 0.0 10.801245766333007 24.300573057057804 10.801245766333007 3.807196863200837 0 0.0 0.8860566476931632 1.1861818737241734 0.0 [PG]{I|L}S{[SA]|[TG]}{I|L}V{I|L};[PG]{I|L}{I|L}S{[SA]|[TG]}V{I|L};[PG]{I|L}{I|L}VA{[CA]|SS}{I|L};[PG]{I|L}{I|L}A{[CA]|SS}V{I|L};[PG]{I|L}S{I|L}{[SA]|[TG]}V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}V{[DA]|[EG]}{I|L}V{I|L};[PG]{I|L}A{I|L}{[CA]|SS}V{I|L};{[VA]|[{I|L}G]}PS{[SA]|[TG]}{I|L}V{I|L};[{I|L}V]N{[DA]|[EG]}{I|L}V{I|L};[PG]{I|L}{I|L}AV{[CA]|SS}{I|L} 4.8393;4.3943;4.3012;4.1885;3.8366;3.5599;3.4847;3.4754;3.2081;3.1858 -;-;-;-;-;-;-;-;-;- 1787 1 2.291 93483.0 0.5 5419 4562 9982 SUDHL4_400M_050219_1,9983 SUDHL4_400M_050219_1,9983,GVGLEGIVL False False ASSPGILVL 55.956056 856.513537585735 2087621.5 9982.0 nc|ENSG00000102606|Q14155-2|ARHGEF7;;nc|ENSG00000102606|Q14155-6|ARHGEF7;;ENST00000483189.1_1_13:111893629-111928079:+|nuORF;;nc|ENSG00000102606|Q14155-1|ARHGEF7;;nc|ENSG00000102606|Q14155-5|ARHGEF7;;nc|ENSG00000102606|Q14155|ARHGEF7;;nc|ENSG00000102606|Q14155-3|ARHGEF7;;ENSG00000102606|ENST00000646102|ARHGEF7 4.917669455210368 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9985 55.963 249.0 433300.0 25 0 101490.0 + 14783 ILDPHVVLL 9 92 509.81846631064377 1017.6223796880876 2 509.8188354372978 MULTI CID FTMS 0 0 0 9984 250869.796875 0.4250423939341571 12 -0.1455192565917968 1 Unmodified _ILDPHVVLL_ ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF 44.40701690623563 0.0526327925666318 5 [HV]PV{I|L}EV{I|L}{I|L} 9 6 + 53.121 0.0 0.0 5.2201 5.2201 83.619 0.0 0.0 0.0 7.569619513137056 10.330145895351848 7.569619513137056 4.771212547196626 0 0.6677353201839438 1.154901959985743 0.0 0.0 [HV]PV{I|L}EV{I|L}{I|L};[HV]VP{I|L}EV{I|L}{I|L};[HV]PV{I|L}D{I|L}{I|L}{I|L};[HV]PVE{I|L}V{I|L}{I|L};[HV]PV{I|L}{I|L}D{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}EV{I|L}{I|L};[HV]PVD{I|L}{I|L}{I|L}{I|L};[HV]PD{I|L}{I|L}V{I|L}{I|L};[HV]V{I|L}PEV{I|L}{I|L};[HV]VP{I|L}D{I|L}{I|L}{I|L} 5.2201;4.7512;4.7512;4.6285;4.5332;4.4762;4.4554;4.3327;4.2824;4.2824 -;-;-;-;-;-;-;-;-;- 761 1 2.291 89155.7 1.0 5420 4563 9984 SUDHL4_400M_050219_1,9985 SUDHL4_400M_050219_1,9985,ILDPHVVLL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9986 55.975 664.0 60660.0 25 0 5204.6 -1 0 84 1039.741992175579 0 1039.741992175579 PEAK CID FTMS 0 0 0 -1 0 2 5 {I|L}S 2 -1 8.5835 0.0 0.0 0.41317 0.0 0.0 1366.0876814691158 508.24152551822505 1874.3292069873407 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}S 0.41317 - 26 + 1 2.291 34324.2 1.0 5421 4563 9984 SUDHL4_400M_050219_1,9986 SUDHL4_400M_050219_1,9986, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9989 55.995 800.0 28693.0 25 0 2980.3 + -1 RKRRPLRRKQN 11 58 775.4855834841728 0 775.4855834841728 PEAK CID FTMS 0 0 0 -1 0 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RKRRPLRRKQN_ REV__ENST00000582588.1_1_18:47015724-47015769:-|nuORF 0.0 0.4761840153648598 5 N 1 -1 0.3786 0.0 0.0 0.024442 0.0 0.0 1266.789149363478 165.10398279361564 1431.8931321570935 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.024442 + + 3 + 1 2.291 26307.2 0.4600000083446502 5422 4565 9988 SUDHL4_400M_050219_1,9989 SUDHL4_400M_050219_1,9989,RKRRPLRRKQN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 9994 56.015 287.0 176620.0 25 0 21585.0 + 1410 ALDDMISTL 9 85 978.4810411334872 977.4737646668872 1 978.4807006716728 MULTI CID FTMS 0 0 0 9993 181958.53125 0.2283364284467247 22 -0.245452880859375 1 Unmodified _ALDDMISTL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 71.13359017698441 0.0206607516130725 5 [MD]{I|L}DA{I|L}ST{I|L} 9 4 + 64.362 0.0 0.0 6.5845 6.5845 85.639 0.0 0.0 0.0 3.7409842324510194 45.36782896906973 3.7409842324510194 3.01029995663982 0 0.7396518287104438 0.0 1.916386562212267 0.0 [MD]{I|L}DA{I|L}ST{I|L};[MD]D{I|L}A{I|L}ST{I|L};[MD]{I|L}AD{I|L}ST{I|L};[MD]DA{I|L}{I|L}ST{I|L};[MD]{I|L}AS{I|L}DT{I|L};[MD]{I|L}{[TV]|[{I|L}S]}ADT{I|L};[MD][RP][{M(Oxidation (M))|F}V]T{I|L};[MD]{I|L}[RP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 6.5845;6.2766;6.2179;6.1369;4.7057;3.2219;1.0885;0.44313 -;-;-;-;-;-;-;- 458 1 2.291 41281.5 1.0 5423 4569 9993 SUDHL4_400M_050219_1,9994 SUDHL4_400M_050219_1,9994,ALDDMISTL True True ALDDMISTL 56.014666 978.480700671673 4227224.5 9993.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 5.583469708760579 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 9995 56.023 482.0 124110.0 25 0 17577.0 + 11614 GLADPGIITI 10 58 969.5616421066248 968.5543656400248 1 969.5604125857352 MULTI CID FTMS 0 0 0 9993 113600.546875 0.7858027662277207 4 -0.0783729553222656 2 Unmodified _GLADPGIITI_ nc|ENSG00000196873|Q5JTY5-2|ZNG1C 58.6788170122104 0.0400518768368984 5 [PG]{I|L}{I|L}DAG{I|L}T{I|L} 10 4 + 67.044 0.0 0.0 6.9221 6.9221 84.834 0.0 0.0 0.0 5.764837301042718 47.92674056792244 5.764837301042718 1.7609125905568137 0 0.0 0.0 1.066901560044258 0.0 [PG]{I|L}{I|L}DAG{I|L}T{I|L};[PG]{I|L}{I|L}DQ{I|L}T{I|L};[PG]{I|L}D{I|L}AG{I|L}T{I|L};[PG]{I|L}DAG{I|L}{I|L}T{I|L};[PG]{I|L}D{I|L}Q{I|L}T{I|L};[PG]{I|L}DQ{I|L}{I|L}T{I|L};[PG]{I|L}{I|L}GEG{I|L}T{I|L};[PG]{I|L}DA{I|L}G{I|L}T{I|L};[PG]D{I|L}{I|L}AG{I|L}T{I|L};[PG]D{I|L}AG{I|L}{I|L}T{I|L} 6.9221;6.7403;6.4295;6.2728;6.2477;6.22;6.1187;5.8079;5.8079;5.6512 -;-;-;-;-;-;-;-;-;- 1033 1 2.291 45631.9 1.0 5424 4569 9993 SUDHL4_400M_050219_1,9995 SUDHL4_400M_050219_1,9995,GLADPGIITI True True GLADPGIITI 56.023233 969.560412585735 860011.625 9993.0 nc|ENSG00000196873|Q5JTY5-2|ZNG1C 4.669708172480266 1.0 True 10.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 9996 56.03 389.0 63054.0 25 0 1643.3 -1 0 67 884.0198852419853 0 884.0198852419853 PEAK CID FTMS 0 0 0 -1 0 3 5 D 1 -1 3.0989 0.0 0.0 0.17548 0.0 0.0 734.5478748767456 913.4074801080686 1647.9553549848142 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.17548 - 2 + 1 2.291 24454.5 1.0 5425 4569 9993 SUDHL4_400M_050219_1,9996 SUDHL4_400M_050219_1,9996, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 9998 56.047 800.0 113440.0 25 0 19199.0 + 452 AEFPLDPQL 9 92 1029.5256202412852 1028.5183437746853 1 1029.528735339642 MULTI CID FTMS 0 0 0 9997 87416.765625 0.8332261767159319 1 -0.0162200927734375 1 Unmodified _AEFPLDPQL_ ENSG00000109606|ENST00000336812|DHX15;ENST00000503562.1_1_4:24541566-24543501:-|nuORF;ENST00000503562.1_1_4:24541777-24541846:-|nuORF 61.60191391372663 0.0251951588191061 5 {[CP]|[EA]}{M(Oxidation (M))|F}P{I|L}DPQ{I|L} 9 0 + 52.954 0.0 0.0 5.1486 5.1486 89.872 0.0 0.0 0.0 7.147642715192504 9.426806100157563 7.147642715192504 17.07371172794111 0 2.2034021960761265 0.0 0.3494850021680094 0.7302046884880937 + + {[CP]|[EA]}{M(Oxidation (M))|F}P{I|L}DPQ{I|L};[{I|L}P]D{M(Oxidation (M))|F}{[CP]|[EA]}PQ{I|L};[{I|L}P]D{[CP]|[EA]}{M(Oxidation (M))|F}PQ{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}P{I|L}Q[DP]{I|L};[{I|L}P]E{[DA]|[EG]}{M(Oxidation (M))|F}PQ{I|L};{[CP]|[EA]}{M(Oxidation (M))|F}P{I|L}Q{I|L}[DP];{[CP]|[EA]}[{I|L}A]S[NS]PQ{I|L};[{I|L}P]E[W{M(Oxidation (M))|F}]PQ{I|L};[{I|L}P]DQ[DV]{I|L}VM;[{I|L}P]EN[DV]{I|L}VM 5.1486;3.4886;3.1959;3.0403;3.0247;2.9243;2.7384;2.6875;2.4901;2.3189 +;-;-;-;-;-;-;-;-;- + 1032 + 1 2.291 66316.0 0.4699999988079071 5426 4570 9997 SUDHL4_400M_050219_1,9998 SUDHL4_400M_050219_1,9998,AEFPLDPQL True True AEFPLDPQL 56.046631 1029.52873533964 780142.375 9997.0 ENSG00000109606|ENST00000336812|DHX15;;ENST00000503562.1_1_4:24541777-24541846:-|nuORF;;ENST00000503562.1_1_4:24541566-24543501:-|nuORF 8.772974809010824 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10001 56.057 237.0 422420.0 25 0 21473.0 + 37181 TIEDGIFEV 9 104 1022.5011303193512 1021.493853852751 1 1022.499316394329 MULTI CID FTMS 0 0 0 10000 241791.59375 0.4732450314761457 -6 0.0552101135253906 1 Unmodified _TIEDGIFEV_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 92.4914307365334 0.0139747738690111 5 [{I|L}T]GDE{I|L}{M(Oxidation (M))|F}EV 9 2 + 90.684 0.0 0.0 8.8776 8.8776 88.217 0.0 0.0 0.0 16.71839326739594 12.795700576058536 12.795700576058536 2.35502013255578 0 1.075257498915995 1.6989700043360187 2.610924374808178 0.0 [{I|L}T]GDE{I|L}{M(Oxidation (M))|F}EV;[{I|L}T]GDE{I|L}E{M(Oxidation (M))|F}V;[{I|L}T]GDE{M(Oxidation (M))|F}{I|L}EV;[{I|L}T]GD{I|L}E{M(Oxidation (M))|F}EV;[{I|L}T]EDG{I|L}{M(Oxidation (M))|F}EV;[{I|L}T]GD{I|L}EE{M(Oxidation (M))|F}V;[{I|L}T]EDG{I|L}E{M(Oxidation (M))|F}V;[{I|L}T]GDE{I|L}EV{M(Oxidation (M))|F};[{I|L}T]GDEE{I|L}{M(Oxidation (M))|F}V;[{I|L}T]EDG{M(Oxidation (M))|F}{I|L}EV 8.8776;8.6471;8.1684;8.1172;8.0264;7.8866;7.7959;7.625;7.5246;7.3173 -;-;-;-;+;-;-;-;-;- + 7332 1 2.291 69395.3 1.0 5427 4572 10000 SUDHL4_400M_050219_1,10001 SUDHL4_400M_050219_1,10001,TIEDGIFEV True True TIEDGIFEV 56.057445 1022.49931639433 3191004.25 10000.0 ENSG00000109971|ENST00000534624|HSPA8;;ENSG00000126803|ENST00000247207|HSPA2;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 6.97647492090861 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10002 56.071 800.0 27777.0 25 0 4931.8 -1 0 36 1199.213061511517 0 1199.213061511517 PEAK CID FTMS 0 0 0 -1 0 2 5 S 1 -1 6.9897 0.0 0.0 0.29167 0.0 0.0 899.4510731189342 1406.9418429010375 2306.392916019972 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.29167 - 1 + 1 2.291 22874.0 0.550000011920929 5428 4572 10000 SUDHL4_400M_050219_1,10002 SUDHL4_400M_050219_1,10002, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10003 56.085 800.0 37150.0 25 0 3356.6 -1 0 69 1172.035693347454 0 1172.035693347454 PEAK CID FTMS 0 0 0 -1 0 3 5 C 1 -1 2.2185 0.0 0.0 0.094724 0.0 0.0 1381.1071400134645 854.9027193658811 2236.009859379345 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.094724 - 3 + 1 2.291 26459.5 0.5799999833106995 5429 4572 10000 SUDHL4_400M_050219_1,10003 SUDHL4_400M_050219_1,10003, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10006 56.102 480.0 186580.0 25 0 26596.0 + 34434 SLWKEVSEL 9 122 545.7918850048824 1089.5692170765649 2 545.7941161990166 MULTI CID FTMS 0 0 0 10005 88510.71875 0.251127810349114 -12 0.1495437622070312 1 Unmodified _SLWKEVSEL_ ENSG00000025156|ENST00000368455|HSF2;nc|ENSG00000025156|Q03933-2|HSF2 78.06048673739656 0.0179866705178931 5 {[TV]|[{I|L}S]}WGVTVSE{I|L} 10 3 + 95.984 0.0 0.0 8.8094 8.8094 89.326 0.0 0.0 0.0 20.79181246047625 58.961805132111046 20.79181246047625 3.358317385287876 0 1.613982988912431 2.0 1.25 0.0 {[TV]|[{I|L}S]}WGVTVSE{I|L};{[TV]|[{I|L}S]}WGVTD{I|L}S{I|L};{[TV]|[{I|L}S]}WGVTVES{I|L};{[TV]|[{I|L}S]}WGVS{I|L}SE{I|L};{[TV]|[{I|L}S]}WGVSE{I|L}S{I|L};{[TV]|[{I|L}S]}WGVS{I|L}ES{I|L};{[TV]|[{I|L}S]}WKEVSE{I|L};{[TV]|[{I|L}S]}WKED{I|L}S{I|L};{[TV]|[{I|L}S]}WKEVES{I|L};{[TV]|[{I|L}S]}WKD{I|L}SE{I|L} 8.8094;8.5011;8.3618;8.1877;7.8795;7.7401;7.6391;7.3309;7.1915;7.0175 -;-;-;-;-;-;+;-;-;- + 3613 1 2.291 70172.7 1.0 5430 4574 10005 SUDHL4_400M_050219_1,10006 SUDHL4_400M_050219_1,10006,SLWKEVSEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10009 56.122 800.0 113190.0 25 0 7940.0 + 20488 LLLDVPTAAV 10 107 506.30818503658367 1010.6018171399674 2 506.3089782595634 MULTI CID FTMS 0 0 0 10008 100796.0 0.0832591209474487 29 -0.2797012329101562 1 Unmodified _LLLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 42.09456458481378 0.1354489350322421 5 {I|L}{I|L}DV{I|L} 5 6 33.416 0.0 0.0 3.3066 0.0 0.0 0.0 454.23109621068494 454.23109621068494 0.3722497583517992 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {I|L}{I|L}DV{I|L} 3.3066 - 538 1 2.291 76323.4 0.9200000166893004 5431 4576 10008 SUDHL4_400M_050219_1,10009 SUDHL4_400M_050219_1,10009,LLLDVPTAAV False True LLLDVPTAAV 56.121984 506.308978259563 17847558.0 10008.0 ENSG00000216490|ENST00000407280|IFI30 4.661458651224772 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10010 56.127 251.0 126440.0 25 0 12116.0 + 1835 ALTPVVVTL 9 44 912.5767592373855 911.5694827707856 1 912.5779907107352 MULTI CID FTMS 0 0 0 10008 118066.359375 0.0368414738432525 37 -0.3689956665039062 2 Unmodified _ALTPVVVTL_ ENSG00000135446|ENST00000257904|CDK4;nc|ENSG00000135446|P11802-2|CDK4 52.268347100219714 0.0353964759249114 5 VSVVT{I|L} 6 5 60.068 0.0 0.0 6.5895 0.0 0.0 295.1899891584 0.0 295.1899891584 0.0 48.61432819416656 0.0 0.0 0 0.3252574989159953 0.0 1.5669015600442575 0.0 VSVVT{I|L} 6.5895 - 173 1 2.291 32431.5 1.0 5432 4576 10008 SUDHL4_400M_050219_1,10010 SUDHL4_400M_050219_1,10010,ALTPVVVTL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10013 56.147 800.0 112480.0 25 0 13848.0 + 29558 QLQDFDWQV 9 95 589.7774674574144 1177.5403819816288 2 589.7776367068291 MULTI CID FTMS 0 0 0 10012 117186.5703125 0.3462363487157668 -18 0.1988334655761718 1 Unmodified _QLQDFDWQV_ ENSG00000169019|ENST00000381571|COMMD8 64.23631603340823 0.0237365939569086 5 [Q{I|L}]QD 4 5 28.857 0.0 0.0 2.4506 0.0 0.0 0.0 690.28822068696 690.28822068696 0.7036209215376488 0.0 0.0 0.0 0 0.0 1.0 0.3807196863200844 1.274227503252014 + [Q{I|L}]QD 2.4506 + + 1022 1 2.291 72054.5 0.3499999940395355 5433 4578 10012 SUDHL4_400M_050219_1,10013 SUDHL4_400M_050219_1,10013,QLQDFDWQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10014 56.161 800.0 107740.0 25 0 19380.0 + 40778 VLLESEQFL 9 100 539.2949188526651 1076.57528477213 2 539.2953979372978 MULTI CID FTMS 0 0 0 10012 87437.8515625 0.5909465265240572 -9 0.123748779296875 2 Unmodified _VLLESEQFL_ ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF 48.345845343767074 0.0439967357579942 5 [{I|L}V]{I|L}ESEQ{M(Oxidation (M))|F}{I|L} 9 0 + 66.405 0.0 0.0 6.1682 6.1682 83.496 0.0 0.0 0.0 13.521825181113629 9.889917747712644 9.889917747712644 2.218487496163561 0 1.048455006504028 1.6989700043360187 0.8807196863200843 0.0 + + [{I|L}V]{I|L}ESEQ{M(Oxidation (M))|F}{I|L};[{I|L}V]E{I|L}SEQ{M(Oxidation (M))|F}{I|L};[{I|L}V]ES{I|L}EQ{M(Oxidation (M))|F}{I|L};[{I|L}V]{I|L}ESE[AG]{M(Oxidation (M))|F}{I|L};[{I|L}V]E{I|L}SE[AG]{M(Oxidation (M))|F}{I|L};{I|L}{I|L}EVSEQ{M(Oxidation (M))|F}{I|L};{I|L}{I|L}VESEQ{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}VSEQ{M(Oxidation (M))|F}{I|L};[{I|L}V]ESE{I|L}Q{M(Oxidation (M))|F}{I|L};{I|L}{I|L}D{I|L}SEQ{M(Oxidation (M))|F}{I|L} 6.1682;5.9621;5.3893;5.3128;5.1068;4.9121;4.9121;4.8861;4.7891;4.7061 +;-;-;-;-;-;-;-;-;- + 930 1 2.291 71428.4 0.3499999940395355 5434 4578 10012 SUDHL4_400M_050219_1,10014 SUDHL4_400M_050219_1,10014,VLLESEQFL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10018 56.182 536.0 115110.0 25 0 3974.3 + 44207 YLGEFSITY 9 95 1092.5250726101128 1091.517796143513 1 1093.528857409954 MULTI CID FTMS 0 0 0 10017 120275.0234375 0.1575789554836262 24 -0.216461181640625 1 Unmodified _YLGEFSITY_ ENSG00000115268|ENST00000592588|RPS15;ENST00000586096.3_1_19:1440314-1440458:+|nuORF 28.486842064014134 0.1687311288560894 5 [TP]T{M(Oxidation (M))|F}RR[WE] 8 8 + 23.161 0.0 0.0 2.1219 2.1219 75.774 0.0 0.0 0.0 1.9056001639392264 0.5225622685225773 0.5225622685225773 3.7943940606144935 0 0.0 0.0 0.3494850021680094 0.0 [TP]T{M(Oxidation (M))|F}RR[WE];[Y{I|L}]{[DA]|[EG]}AT{I|L}YY;[Y{I|L}]{[DA]|[EG]}A[DV]Q[TP];[Y{I|L}]{[DA]|[EG]}{[RE]|[WV]}Q[TP];[TP]{M(Oxidation (M))|F}TRR[WE];{[ES]|[DT]|[{I|L}C]}Q{I|L}T{I|L}S[WE];{[WN]|[YH]}{M(Oxidation (M))|F}EG{I|L}M[VP];[{M(Oxidation (M))|F}E]GS{I|L}T{I|L}Q[TP];{[ES]|[DT]|[{I|L}C]}{I|L}QT{I|L}S[WE];[{M(Oxidation (M))|F}E]GS{I|L}TQ{I|L}[TP] 2.1219;1.7742;1.2533;1.2089;1.2057;1.0522;1.0325;1.0103;0.96989;0.92797 -;-;-;-;-;-;-;-;-;- 1908 + 1 2.291 44078.8 1.0 5435 4581 10017 SUDHL4_400M_050219_1,10018 SUDHL4_400M_050219_1,10018,YLGEFSITY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10022 56.207 800.0 27315.0 25 0 841.17 -1 0 56 1116.989550769329 0 1116.989550769329 PEAK CID FTMS 0 0 0 -1 0 1 5 P 1 -1 1.5938 0.0 0.0 0.071408 0.0 0.0 1530.293785521277 601.5792330377561 2131.873018559033 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.071408 - 7 + 1 2.291 24663.0 0.4099999964237213 5436 4584 10021 SUDHL4_400M_050219_1,10022 SUDHL4_400M_050219_1,10022, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10028 56.234 522.0 151260.0 25 0 9871.1 + 34401 SLVDTVYAL 9 80 980.5303822917148 979.5231058251146 1 980.5281860232352 MULTI CID FTMS 0 0 0 10027 109613.6015625 0.2870419371944543 -11 0.0920524597167968 1 Unmodified _SLVDTVYAL_ ENSG00000102606|ENST00000646102|ARHGEF7;ENSG00000129675|ENST00000250617|ARHGEF6;nc|ENSG00000102606|Q14155-1|ARHGEF7;nc|ENSG00000102606|Q14155-5|ARHGEF7;nc|ENSG00000129675|Q15052-2|ARHGEF6 109.62928328672726 0.0058899017516516 5 {[TV]|[{I|L}S]}DVTVYA{I|L} 9 2 + 97.278 0.0 0.0 9.9312 9.9312 89.819 0.0 0.0 0.0 25.87128018967597 49.51213124741251 25.87128018967597 3.26606256887672 0 0.6237125054200234 1.5228787452803376 3.1989700043360187 0.0 {[TV]|[{I|L}S]}DVTVYA{I|L};{[TV]|[{I|L}S]}VDTVYA{I|L};{[TV]|[{I|L}S]}DVTYVA{I|L};{[TV]|[{I|L}S]}VDTYVA{I|L};{[TV]|[{I|L}S]}DVTVS{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}DVYTVA{I|L};{[TV]|[{I|L}S]}VDTVS{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}DVTYAV{I|L};{[TV]|[{I|L}S]}VDYTVA{I|L};{[TV]|[{I|L}S]}VDTYAV{I|L} 9.9312;9.5977;9.37;9.0366;8.6029;8.3724;8.2695;8.1823;8.039;7.8489 -;+;-;-;-;-;-;-;-;- + 2018 1 2.291 58606.4 1.0 5437 4589 10027 SUDHL4_400M_050219_1,10028 SUDHL4_400M_050219_1,10028,SLVDTVYAL True True SLVDTVYAL 56.234398 980.528186023235 1554619.375 10027.0 nc|ENSG00000102606|Q14155-1|ARHGEF7;;nc|ENSG00000102606|Q14155-5|ARHGEF7;;ENSG00000129675|ENST00000250617|ARHGEF6;;nc|ENSG00000129675|Q15052-2|ARHGEF6;;ENSG00000102606|ENST00000646102|ARHGEF7 6.704830487569173 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10029 56.248 800.0 103650.0 25 0 4784.9 -1 0 109 926.9341756470076 1851.8537983608155 2 927.4368163943292 MULTI CID FTMS 0 0 0 10027 83874.2421875 0.3117665463109925 -14 0.1210479736328125 2 5 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}Y 11 -1 61.982 0.0 0.0 3.347 0.0 0.0 0.0 382.21658250509967 382.21658250509967 38.08092317009784 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}Y 3.347 - 1263 1 2.291 58168.9 0.6800000071525574 5438 4589 10027 SUDHL4_400M_050219_1,10029 SUDHL4_400M_050219_1,10029, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10032 56.27 800.0 123650.0 25 0 8561.0 + + 1406 ALIAEGIAL 9 124 870.5294086566778 869.5221321900777 1 870.5309936404228 MULTI CID FTMS 0 0 0 10031 64768.359375 0.7454583809003822 8 -0.0771255493164062 1 Unmodified _ALDAIALAL_ ENSG00000197102|ENST00000360184|DYNC1H1 77.98433622928108 0.0180125044636492 5 [{I|L}A]{I|L}ADA{I|L}A{I|L} 9 -1 + 69.082 0.0 0.0 7.9448 7.9448 86.264 0.0 0.0 0.0 3.3313422258543426 16.478174818886373 3.3313422258543426 1.6243799541645956 0 0.9049471895720984 0.0 1.3199601741485107 0.0 [{I|L}A]{I|L}ADA{I|L}A{I|L};[{I|L}A]EGA{I|L}{I|L}A{I|L};[{I|L}A]DAA{I|L}{I|L}A{I|L};[{I|L}A]GEA{I|L}{I|L}A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}A{I|L}{I|L}A{I|L};[{I|L}A]EG{I|L}A{I|L}A{I|L};[{I|L}A]DA{I|L}A{I|L}A{I|L};[{I|L}A]GE{I|L}A{I|L}A{I|L};[{I|L}A]{I|L}AEG{I|L}A{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}A{I|L}A{I|L} 7.9448;7.758;7.7125;7.6143;7.5617;7.5413;7.4958;7.3976;7.3576;7.345 -;-;-;-;-;-;+;-;-;- + 1685 1 2.291 66634.0 0.3899999856948852 5439 4591 10031 SUDHL4_400M_050219_1,10032 SUDHL4_400M_050219_1,10032,ALDAIALAL False False ALIAEGIAL 56.269992 870.530993640423 527718.3125 10031.0 ENSG00000197102|ENST00000360184|DYNC1H1 3.5062155723571777 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10035 56.287 587.0 175070.0 25 0 38869.0 + 34435 SLWKEVSEL 9 77 1090.578759855278 1089.5714833886782 1 1090.579028308392 MULTI CID FTMS 0 0 0 10034 190596.171875 0.9586337277450364 7 -0.0593948364257812 1 Unmodified _SLWKEVSEL_ ENSG00000025156|ENST00000368455|HSF2;nc|ENSG00000025156|Q03933-2|HSF2 51.41523569358685 0.0372669606867193 5 {[TV]|[{I|L}S]}WKEVSE{I|L} 9 0 + 79.491 0.0 0.0 7.2956 7.2956 88.908 0.0 0.0 0.0 5.642492736872597 63.57361725837448 5.642492736872597 4.771212547196626 0 0.9247425010840048 0.0 1.5629529932484498 0.0 + + {[TV]|[{I|L}S]}WKEVSE{I|L};{[TV]|[{I|L}S]}WRTVSE{I|L};{[TV]|[{I|L}S]}WKD{I|L}SE{I|L};{[TV]|[{I|L}S]}WRS{I|L}SE{I|L};{[TV]|[{I|L}S]}W[VG]TVSE{I|L};{[TV]|[{I|L}S]}WRTWE{I|L};[WK]{[TV]|[{I|L}S]}EVSE{I|L};[WK]{NN|[MP]|[D{I|L}]|[EV]}TVSE{I|L};{[TV]|[{I|L}S]}[VG]WTVSE{I|L};{[TV]|[{I|L}S]}W[VG]S{I|L}SE{I|L} 7.2956;6.8577;6.4679;6.03;6.0126;5.9982;5.6684;5.2305;5.1849;5.1849 +;-;-;-;-;-;-;-;-;- + 1556 1 2.291 68747.6 1.0 5440 4593 10034 SUDHL4_400M_050219_1,10035 SUDHL4_400M_050219_1,10035,SLWKEVSEL True True SLWKEVSEL 56.286742 1090.57902830839 2489170.375 10034.0 nc|ENSG00000025156|Q03933-2|HSF2;;ENSG00000025156|ENST00000368455|HSF2 7.793993790944417 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10038 56.299 297.0 244490.0 25 0 26593.0 + 8569 ETLSQLREI 9 113 544.8027714079846 1087.590989882769 2 544.8033935427666 MULTI CID FTMS 0 0 0 10037 166391.71875 0.8021558710659481 -1 0.0038871765136718 1 Unmodified _ETLSQLREI_ REV__ENSG00000096696|ENST00000379802|DSP 54.773552608820026 0.0299037012502309 5 {[TV]|[{I|L}S]}AREG{I|L}TE{I|L} 10 -1 + 84.59 0.0 0.0 7.7777 7.7777 87.478 0.0 0.0 0.0 4.248650278674049 16.53212513775344 4.248650278674049 2.7422750325201406 0 0.7742275032520141 1.6989700043360187 1.774227503252014 0.0 {[TV]|[{I|L}S]}AREG{I|L}TE{I|L};{[TV]|[{I|L}S]}AERG{I|L}TE{I|L};[WK]{I|L}EG{I|L}TE{I|L};{[TV]|[{I|L}S]}WG{I|L}G{I|L}TE{I|L};{[QN]|[E{I|L}]|[KN]}TGRG{I|L}TE{I|L};{[TV]|[{I|L}S]}ARDA{I|L}TE{I|L};[WK]E{I|L}G{I|L}TE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}EG{I|L}TE{I|L};[WK]{I|L}DA{I|L}TE{I|L};{[ET]|[MV]}{I|L}GRG{I|L}TE{I|L} 7.7777;7.5256;7.3871;7.082;7.0475;7.04;6.9484;6.8335;6.6493;6.627 -;-;-;-;-;-;-;-;-;- 5055 1 2.291 59376.9 1.0 5441 4595 10037 SUDHL4_400M_050219_1,10038 SUDHL4_400M_050219_1,10038,ETLSQLREI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10041 56.311 347.0 43043.0 25 0 2108.6 -1 0 41 1159.197924792767 0 1159.197924792767 PEAK CID FTMS 0 0 0 -1 0 1 5 R 1 -1 0.9691 0.0 0.0 0.041837 0.0 0.0 1255.9365467517466 901.33063684635 2157.2671835980964 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.041837 - 2 + 1 2.291 18983.3 1.0 5442 4597 10040 SUDHL4_400M_050219_1,10041 SUDHL4_400M_050219_1,10041, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10042 56.325 800.0 24077.0 25 0 1429.8 -1 0 51 1049.936450183392 0 1049.936450183392 PEAK CID FTMS 0 0 0 -1 0 2 5 T{I|L}N 3 -1 16.146 0.0 0.0 0.76966 0.0 0.0 1440.5252672038112 326.1369722955688 1766.66223949938 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.7742275032520141 T{I|L}N 0.76966 - 15 + 1 2.291 23356.2 0.5 5443 4597 10040 SUDHL4_400M_050219_1,10042 SUDHL4_400M_050219_1,10042, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10048 56.351 392.0 372530.0 25 0 137200.0 + 20627 LLPPPPLLA 9 114 930.6023324518457 929.5950559852456 1 930.6029540896416 MULTI CID FTMS 0 0 0 10047 96163.546875 0.3383274719642141 -5 0.0387763977050781 1 Unmodified _LLPPPPLLA_ ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2 56.04830969593885 0.0282699710924866 5 WW{I|L}{I|L}{I|L}S 6 7 32.128 0.0 0.0 3.4561 0.0 0.0 0.0 128.1234733038581 128.1234733038581 -2.382287586051113 0.0 -2.382287586051113 0.0 0 0.0 1.3010299956639813 0.4247425010840047 0.0 WW{I|L}{I|L}{I|L}S 3.4561 - 759 1 2.291 98111.2 1.0 5444 4602 10047 SUDHL4_400M_050219_1,10048 SUDHL4_400M_050219_1,10048,LLPPPPLLA True True LLPPPPLLA 56.350972 930.602954089642 2263371.0 10047.0 nc|ENSG00000148219|O75129-2|ASTN2;;nc|ENSG00000148219|O75129-3|ASTN2;;ENSG00000148219|ENST00000313400|ASTN2 4.754416306813558 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10049 56.359 461.0 279320.0 25 0 16978.0 + 29560 QLQDFDWQV 9 114 1178.5471272880145 1177.5398508214143 1 1178.546801745892 MULTI CID FTMS 0 0 0 10047 314572.78125 0.672805420017105 6 -0.1066398620605468 2 Unmodified _QLQDFDWQV_ ENSG00000169019|ENST00000381571|COMMD8 173.68634876852585 1.0092458980979228e-06 5 [Q{I|L}]QD{M(Oxidation (M))|F}DWQV 9 0 + 113.71 0.0 0.0 9.6565 9.6565 95.389 0.0 0.0 0.0 20.47537395943785 71.5244665940468 20.47537395943785 9.208187539523747 0 1.5986198691406328 1.2218487496163564 1.841129063296272 3.2302046884880937 + + [Q{I|L}]QD{M(Oxidation (M))|F}DWQV;[Q{I|L}]QD{M(Oxidation (M))|F}DW[AG]V;[Q{I|L}][AG]D{M(Oxidation (M))|F}DWQV;[Q{I|L}]DQ{M(Oxidation (M))|F}DWQV;[Q{I|L}][AG]D{M(Oxidation (M))|F}DW[AG]V;[Q{I|L}]DQ{M(Oxidation (M))|F}DW[AG]V;[Q{I|L}]D[AG]{M(Oxidation (M))|F}DWQV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}Q{M(Oxidation (M))|F}DWQV;[Q{I|L}]D{M(Oxidation (M))|F}QDWQV;{[QV]|[N{I|L}]|[RA]|[KV]}AAD{M(Oxidation (M))|F}DWQV 9.6565;8.8746;8.8746;8.4754;8.0963;7.6935;7.6935;7.3133;7.2764;7.1188 +;-;-;-;-;-;-;-;-;- + 9481 1 2.291 80328.6 1.0 5445 4602 10047 SUDHL4_400M_050219_1,10049 SUDHL4_400M_050219_1,10049,QLQDFDWQV True True QLQDFDWQV 56.359206 1178.54680174589 5073923.0 10047.0 ENSG00000169019|ENST00000381571|COMMD8 10.818860054016112 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10050 56.37 604.0 25644.0 25 0 918.04 -1 0 42 1175.928027331829 0 1175.928027331829 PEAK CID FTMS 0 0 0 -1 0 3 5 C 1 -1 2.2185 0.0 0.0 0.09441 0.0 0.0 1500.7507557361207 743.0675142877561 2243.8182700238767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.09441 - 1 + 1 2.291 17756.8 1.0 5446 4602 10047 SUDHL4_400M_050219_1,10050 SUDHL4_400M_050219_1,10050, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10051 56.377 430.0 190130.0 25 0 20487.0 + 32470 SAIGPFSGL 9 111 848.451300816655 847.444024350055 1 848.4489623904228 MULTI CID FTMS 0 0 0 10047 113655.5390625 0.4972938540343848 -18 0.151092529296875 4 Unmodified _SAIGPFSGL_ ENSG00000111615|ENST00000229214|KRR1;ENST00000550023.5_1_12:75900038-75900188:-|nuORF;nc|ENSG00000111615|Q13601-2|KRR1 85.27202061508552 0.0162393975915471 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSG{I|L}TG{I|L} 9 6 + 80.581 0.0 0.0 9.5087 9.5087 85.577 0.0 0.0 0.0 14.983105537896009 14.973024840566469 14.973024840566469 0.1230450566754512 0 0.0 2.0 1.6758337024346173 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSG{I|L}TG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SGG{I|L}TG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}ASG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SG{I|L}ASG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSGT{I|L}G{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SGGT{I|L}G{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}GTG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SG{I|L}GTG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSA{I|L}SG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SGA{I|L}SG{I|L} 9.5087;9.4942;9.4913;9.4768;9.0867;9.0722;9.0496;9.035;8.8276;8.813 -;-;-;-;-;-;-;-;-;- 1680 1 2.291 60459.8 1.0 5447 4602 10047 SUDHL4_400M_050219_1,10051 SUDHL4_400M_050219_1,10051,SAIGPFSGL True True SAIGPFSGL 56.377478 848.448962390423 2193591.75 10047.0 ENSG00000111615|ENST00000229214|KRR1;;ENST00000550023.5_1_12:75900038-75900188:-|nuORF;;nc|ENSG00000111615|Q13601-2|KRR1 8.34263308842977 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10055 56.402 800.0 49958.0 25 0 865.52 -1 0 89 859.7292358279228 0 859.7292358279228 PEAK CID FTMS 0 0 0 -1 0 1 5 V 1 -1 6.9897 0.0 0.0 0.40698 0.0 0.0 1232.1769947497924 383.1753634088501 1615.3523581586423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.40698 - 20 + 1 2.291 34237.2 0.3700000047683716 5448 4605 10054 SUDHL4_400M_050219_1,10055 SUDHL4_400M_050219_1,10055, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10056 56.416 800.0 118220.0 25 0 13769.0 + 29559 QLQDFDWQV 9 105 589.7774674574144 1177.5403819816288 2 589.7783080935478 MULTI CID FTMS 0 0 0 10054 91334.5078125 0.2698545269515282 9 -0.118194580078125 2 Unmodified _QLQDFDWQV_ ENSG00000169019|ENST00000381571|COMMD8 115.6920309560759 0.0032017028976397 5 [Q{I|L}]QD{M(Oxidation (M))|F}DWQV 9 0 + 69.43 0.0 0.0 5.8962 5.8962 82.77 0.0 0.0 0.0 2.2232857340214167 7.464825806156256 2.2232857340214167 2.2232857340214167 0 0.5074908058443608 1.0457574905606752 1.6861818737241734 2.0994850021680094 + + [Q{I|L}]QD{M(Oxidation (M))|F}DWQV;[AG]{I|L}QD{M(Oxidation (M))|F}DWQV;[AG]VEQ{M(Oxidation (M))|F}DWQV;[Q{I|L}][AG]D{M(Oxidation (M))|F}DWQV;[Q{I|L}]DQ{M(Oxidation (M))|F}DWQV;[AG]{I|L}DQ{M(Oxidation (M))|F}DWQV;{[QV]|[N{I|L}]|[RA]|[KV]}AAD{M(Oxidation (M))|F}DWQV;[AG]D{I|L}Q{M(Oxidation (M))|F}DWQV;{[QV]|[N{I|L}]|[RA]|[KV]}EQ{M(Oxidation (M))|F}DWQV;{NN|[MP]|[D{I|L}]|[EV]}QQ{M(Oxidation (M))|F}DWQV 5.8962;5.7074;5.332;5.1142;5.0095;4.8207;4.6885;4.6712;4.5838;4.3282 +;-;-;-;-;-;-;-;-;- + 1507 1 2.291 74253.4 0.7400000095367432 5449 4605 10054 SUDHL4_400M_050219_1,10056 SUDHL4_400M_050219_1,10056,QLQDFDWQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10057 56.428 689.0 21161.0 25 0 2827.9 -1 0 40 1053.8048356561023 0 1053.325488269329 PEAK CID FTMS 0 0 0 10054 45323.62890625 1.0 0 0.0 3 5 T 1 -1 3.0989 0.0 0.0 0.14718 0.0 0.0 1675.373451974511 326.1412752740844 2001.514727248596 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.14718 - 2 + 1 2.291 19536.0 1.0 5450 4605 10054 SUDHL4_400M_050219_1,10057 SUDHL4_400M_050219_1,10057, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10060 56.448 800.0 29194.0 25 0 976.35 -1 0 62 1144.489184558392 0 1144.489184558392 PEAK CID FTMS 0 0 0 -1 0 1 5 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.20132 0.0 0.0 1292.2768177478404 844.5781344049436 2136.854952152784 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20132 - 1 + 1 2.291 24664.8 0.4099999964237213 5451 4607 10059 SUDHL4_400M_050219_1,10060 SUDHL4_400M_050219_1,10060, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10063 56.463 460.0 200460.0 25 0 30621.0 + 1615 ALLSLDPAAV 10 80 969.5603930349148 968.5531165683147 1 969.5614501833916 MULTI CID FTMS 0 0 0 10062 181670.140625 0.8979360479933521 9 -0.1337203979492187 1 Unmodified _ALLSLDPAAV_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 115.6920309560759 0.000993545740741 5 [{I|L}A]{I|L}S{I|L}DPAAV 10 0 + 91.75 0.0 0.0 9.4729 9.4729 88.411 0.0 0.0 0.0 17.98332479720628 33.58349385648225 17.98332479720628 2.257272671616306 0 2.004432191740108 1.2218487496163564 1.9802046884880933 0.0 + + [{I|L}A]{I|L}S{I|L}DPAAV;[{I|L}A]{I|L}SD{I|L}PAAV;[{I|L}A]{I|L}DS{I|L}PAAV;[{I|L}A]{I|L}S{I|L}DPAG{I|L};[{I|L}A]{I|L}SD{I|L}PAG{I|L};[{I|L}A]{I|L}SD[PA]{I|L}AV;[{I|L}A]{I|L}DS{I|L}PAG{I|L};{I|L}{I|L}AS{I|L}DPAAV;[{I|L}A]{I|L}SD[PA]A{I|L}V;[{I|L}A]{I|L}DS[PA]{I|L}AV 9.4729;9.2398;8.6195;8.4127;8.1797;7.7251;7.5594;7.2888;7.1562;7.1048 +;-;-;-;-;-;-;-;-;- + 3853 1 2.291 67328.5 1.0 5452 4609 10062 SUDHL4_400M_050219_1,10063 SUDHL4_400M_050219_1,10063,ALLSLDPAAV True True ALLSLDPAAV 56.462713 969.561450183392 1411522.5 10062.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 7.312700112660726 1.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10068 56.49 717.0 12567.0 25 0 1568.9 -1 0 23 1188.5485440465973 0 1188.734912097454 PEAK CID FTMS 0 0 0 10067 29765.24609375 1.0 0 0.0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 17217.6 1.0 5453 4613 10067 SUDHL4_400M_050219_1,10068 SUDHL4_400M_050219_1,10068, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10069 56.504 800.0 125530.0 25 0 4796.5 + 33692 SIYSGLEAF 9 106 986.4833024932698 985.4760260266696 1 986.4838744997978 MULTI CID FTMS 0 0 0 10067 88815.96875 0.5735032090307286 4 -0.1069717407226562 2 Unmodified _SIYSGLEAF_ ENSG00000112972|ENST00000325110|HMGCS1;ENST00000514610.1_1_5:43294791-43295951:-|nuORF 128.3654064809346 0.0055442937744054 5 {[TV]|[{I|L}S]}YSG{I|L}EA{M(Oxidation (M))|F} 9 0 + 77.984 0.0 0.0 7.9133 7.9133 88.393 0.0 0.0 0.0 6.809866658179118 14.973024840566469 6.809866658179118 3.315016636499024 0 1.587180496500464 0.9208187539523752 2.4802046884880937 0.0 + + {[TV]|[{I|L}S]}YSG{I|L}EA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}GYS{I|L}EA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}YGS{I|L}EA{M(Oxidation (M))|F};{[VA]|[{I|L}G]}SYS{I|L}EA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}YSAVEA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}GEYAS{I|L}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}GEY{[TV]|[{I|L}S]}A{M(Oxidation (M))|F};{[VA]|[{I|L}G]}EAH{I|L}EA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}GYTVEA{M(Oxidation (M))|F};{[TV]|[{I|L}S]}YGTVEA{M(Oxidation (M))|F} 7.9133;7.5769;7.5542;7.2223;7.1593;7.0618;6.9577;6.8364;6.8229;6.8002 +;-;-;-;-;-;-;-;-;- + 4704 1 2.291 70062.2 0.4099999964237213 5454 4613 10067 SUDHL4_400M_050219_1,10069 SUDHL4_400M_050219_1,10069,SIYSGLEAF True True SIYSGLEAF 56.503526 986.483874499798 906741.5625 10067.0 ENST00000514610.1_1_5:43294791-43295951:-|nuORF;;ENSG00000112972|ENST00000325110|HMGCS1 5.053723653157552 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10071 56.514 369.0 176640.0 25 0 14628.0 -1 0 91 926.9341756470076 1851.8537983608155 2 926.935107409954 MULTI CID FTMS 0 0 0 10070 134207.75 0.6304589632995833 18 -0.4496612548828125 1 5 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}YE 12 -1 82.93 0.0 0.0 4.4782 0.0 0.0 0.0 253.1524793513028 253.1524793513028 60.209347275122624 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5 1.3851518780601924 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}YE 4.4782 - 1071 1 2.291 51065.9 1.0 5455 4614 10070 SUDHL4_400M_050219_1,10071 SUDHL4_400M_050219_1,10071, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10072 56.528 800.0 165720.0 25 0 18141.0 + 16266 IVTEIISEI 9 97 1016.586760631863 1015.5794841652628 1 1016.586596667767 MULTI CID FTMS 0 0 0 10070 98311.0625 0.5150206174968126 -6 0.0554924011230468 2 Unmodified _IVTEIISEI_ ENSG00000109805|ENST00000251496|NCAPG 133.70201269244603 0.0112873236905593 5 [{I|L}V]TE{I|L}{I|L}SE{I|L} 9 0 + 86.815 0.0 0.0 8.5484 8.5484 85.287 0.0 0.0 0.0 0.3322691656989605 14.973024840566469 0.3322691656989605 0.3322691656989605 0 1.1641478515490356 1.3010299956639813 2.4361818737241734 0.0 + + [{I|L}V]TE{I|L}{I|L}SE{I|L};{[ET]|[MV]}{I|L}V{I|L}{I|L}SE{I|L};{[ET]|[MV]}V{I|L}{I|L}{I|L}SE{I|L};{I|L}{I|L}SE{I|L}{I|L}SE{I|L};{[ET]|[MV]}{I|L}{I|L}V{I|L}SE{I|L};{[QN]|[E{I|L}]|[KN]}TV{I|L}{I|L}SE{I|L};{I|L}{I|L}ES{I|L}{I|L}SE{I|L};{[QN]|[E{I|L}]|[KN]}S{I|L}{I|L}{I|L}SE{I|L};[{I|L}V]TE{I|L}S{I|L}E{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}{I|L}{I|L}{I|L}SE{I|L} 8.5484;8.5156;8.3581;7.9148;7.9042;7.7758;7.7679;7.6183;7.4073;7.3999 +;-;-;-;-;-;-;-;-;- + 5570 1 2.291 90958.1 0.4399999976158142 5456 4614 10070 SUDHL4_400M_050219_1,10072 SUDHL4_400M_050219_1,10072,IVTEIISEI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10075 56.548 800.0 54339.0 25 0 2212.7 + -1 YLGEFSITY 9 83 1092.5228695870542 0 1092.523730456829 PEAK CID FTMS 0 0 0 10074 76653.953125 0.752300827525037 -6 0.06927490234375 1 ENSG00000115268|ENST00000592588|RPS15;ENST00000586096.3_1_19:1440314-1440458:+|nuORF 5 YT{I|L}EWS 6 -1 29.592 0.0 0.0 1.3555 0.0 0.0 1127.524912902821 273.12473474674067 1400.6496476495615 0.0 0.0 0.0 0.0 0 0.0 0.0 1.3807196863200843 0.0 YT{I|L}EWS 1.3555 - 1400 + 1 2.291 34902.1 0.4399999976158142 5457 4616 10074 SUDHL4_400M_050219_1,10075 SUDHL4_400M_050219_1,10075, False False YLGEFSITY 56.548392 1092.52373045683 8412972.0 10074.0 ENSG00000115268|ENST00000592588|RPS15;;ENST00000586096.3_1_19:1440314-1440458:+|nuORF 5.453000068664551 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10076 56.554 307.0 28179.0 25 0 2517.1 -1 0 27 1109.870288074017 0 1109.870288074017 PEAK CID FTMS 0 0 0 -1 0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 15412.5 1.0 5458 4616 10074 SUDHL4_400M_050219_1,10076 SUDHL4_400M_050219_1,10076, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10077 56.568 800.0 166510.0 25 0 21434.0 + + 38830 SLPDIKVYL 9 92 524.307558854707 1046.600564776214 2 524.3073608279228 MULTI CID FTMS 0 0 0 10074 87191.0703125 0.5292052430901476 -1 0.0040664672851562 3 Unmodified _TVIAAPYLIS_ nc|ENSG00000169220|O43566-6|RGS14;nc|ENSG00000169220|O43566-5|RGS14;ENST00000425155.6_1_5:176795054-176799073:+|nuORF;ENST00000514713.5_1_5:176793951-176795930:+|nuORF;nc|ENSG00000169220|O43566-4|RGS14;ENSG00000169220|ENST00000408923|RGS14 39.94969957227396 0.1580982266129622 5 [DP]{I|L}KVY{I|L}{[TV]|[{I|L}S]} 9 -1 + 46.111 0.0 0.0 4.4058 4.4058 81.846 0.0 0.0 0.0 2.61107503885448 2.720836615034941 2.61107503885448 5.726825097560422 0 0.0 1.2218487496163564 0.7059771852360797 0.0 [DP]{I|L}KVY{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[VG]VPY{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[VG]PVY{I|L}{[TV]|[{I|L}S]};[DP]{I|L}KYV{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[VG]VYP{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[VG]PYV{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}{[ET]|[MV]}[K{I|L}]M{I|L};{[TV]|[{I|L}S]}{I|L}S{[MS]|[{M(Oxidation (M))|F}A]}P{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}S{[ES]|[DT]|[{I|L}C]}V{I|L}{[TV]|[{I|L}S]};[K{I|L}]VDPY{I|L}{[TV]|[{I|L}S]} 4.4058;3.8586;3.8355;3.7544;3.4948;3.1841;3.07;2.9203;2.6326;2.4254 -;-;-;-;-;-;-;-;-;- 488 1 2.291 110411.8 0.8600000143051147 5459 4616 10074 SUDHL4_400M_050219_1,10077 SUDHL4_400M_050219_1,10077,TVIAAPYLIS False False SLPDIKVYL 56.567869 524.307360827923 780425.0625 10074.0 nc|ENSG00000169220|O43566-6|RGS14;;nc|ENSG00000169220|O43566-5|RGS14;;ENST00000425155.6_1_5:176795054-176799073:+|nuORF;;ENST00000514713.5_1_5:176793951-176795930:+|nuORF;;nc|ENSG00000169220|O43566-4|RGS14;;ENSG00000169220|ENST00000408923|RGS14 3.7466421127319336 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10078 56.582 800.0 30380.0 25 0 6138.7 -1 0 47 1167.231249988079 0 1167.231249988079 PEAK CID FTMS 0 0 0 -1 0 4 5 A 1 -1 5.4846 0.0 0.0 0.23514 0.0 0.0 1854.2602467029176 404.12888513736567 2258.3891318402834 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.23514 - 7 + 1 2.291 24432.3 0.4099999964237213 5460 4616 10074 SUDHL4_400M_050219_1,10078 SUDHL4_400M_050219_1,10078, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10081 56.603 800.0 251050.0 25 0 27034.0 -1 0 69 751.6986914741846 2252.074245022753 3 752.0330078005791 MULTI CID FTMS 0 0 0 10080 80942.640625 0.4920586960246842 1 -0.0259666442871093 1 5 {I|L}DA[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 10 -1 72.652 0.0 0.0 3.226 0.0 0.0 1099.5780736393576 0.0 1099.5780736393576 0.0 62.730012720637376 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.0 {I|L}DA[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3.226 - 259 1 2.291 156522.5 0.6000000238418579 5461 4618 10080 SUDHL4_400M_050219_1,10081 SUDHL4_400M_050219_1,10081, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10082 56.612 464.0 21705.0 25 0 1673.7 -1 0 27 1131.960986316204 0 1131.960986316204 PEAK CID FTMS 0 0 0 -1 0 2 5 M 1 -1 4.6041 0.0 0.0 0.20355 0.0 0.0 1475.0179676501832 652.8407686822874 2127.8587363324705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.20355 - 2 + 1 2.291 16185.5 1.0 5462 4618 10080 SUDHL4_400M_050219_1,10082 SUDHL4_400M_050219_1,10082, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10085 56.624 346.0 11990.0 25 0 1372.8 -1 0 12 1067.1318617558704 0 1067.443896472454 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 12815.6 1.0 5463 4620 10084 SUDHL4_400M_050219_1,10085 SUDHL4_400M_050219_1,10085, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10086 56.638 800.0 142990.0 25 0 18842.0 + 44415 YMAELIERL 9 94 569.3018499612299 1136.5891469892597 2 569.3015624880791 MULTI CID FTMS 0 0 0 10084 187190.3125 1.0 0 0.0 2 Unmodified _YMAELIERL_ ENSG00000112312|ENST00000230056|GMNN 40.23920728925047 0.0741434193262949 5 YMAE{I|L}{I|L}E[R{I|L}] 9 0 + 89.843 0.0 0.0 7.9046 7.9046 88.499 0.0 0.0 0.0 78.6721376912844 4.762036441594191 4.762036441594191 3.450528104279016 0 1.3494850021680094 2.0 0.3494850021680094 0.0 + + YMAE{I|L}{I|L}E[R{I|L}];YMA{I|L}E{I|L}E[R{I|L}];YM{I|L}AE{I|L}E[R{I|L}];{I|L}{I|L}[R{M(Oxidation (M))|F}]{I|L}EA[{M(Oxidation (M))|F}E];{I|L}{I|L}[R{M(Oxidation (M))|F}]E{I|L}A[{M(Oxidation (M))|F}E];{[TV]|[{I|L}S]}{[YD]|[{M(Oxidation (M))|F}M]}E{I|L}E[R{I|L}];{I|L}{I|L}[R{M(Oxidation (M))|F}]EA{I|L}[{M(Oxidation (M))|F}E];{[CP]|[EA]}{I|L}{I|L}[R{M(Oxidation (M))|F}]{I|L}[{M(Oxidation (M))|F}E];{NN|[MP]|[D{I|L}]|[EV]}VV[R{M(Oxidation (M))|F}]{I|L}[{M(Oxidation (M))|F}E];{I|L}{I|L}{[CP]|[EA]}[R{M(Oxidation (M))|F}]{I|L}[{M(Oxidation (M))|F}E] 7.9046;7.601;6.9625;3.7656;3.462;2.8304;2.8235;1.3732;1.3282;1.1036 +;-;-;-;-;-;-;-;-;- + 250 + 1 2.291 89090.1 0.5799999833106995 5464 4620 10084 SUDHL4_400M_050219_1,10086 SUDHL4_400M_050219_1,10086,YMAELIERL True True YMAELIERL 56.637612 569.301562488079 643996.75 10084.0 ENSG00000112312|ENST00000230056|GMNN 4.991322676340739 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10087 56.64 100.0 59410.0 25 0 8852.0 -1 0 17 999.5278198122978 0 999.5278198122978 PEAK CID FTMS 0 0 0 -1 0 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 15492.5 1.0 5465 4620 10084 SUDHL4_400M_050219_1,10087 SUDHL4_400M_050219_1,10087, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10088 56.654 800.0 219370.0 25 0 13983.0 + 29458 QLIDKVWQL 9 143 571.8320366511081 1141.649520369016 2 571.8315307497978 MULTI CID FTMS 0 0 0 10084 145728.5 0.120750303525704 -6 0.111419677734375 4 Unmodified _QLIDKVWQL_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 176.83740622441886 5.184912498982613e-07 5 [Q{I|L}]{I|L}T{I|L}QWQ{I|L} 9 3 + 93.123 0.0 0.0 8.1569 8.1569 89.872 0.0 0.0 0.0 14.366351778869088 16.478174818886373 14.366351778869088 4.334843577808215 0 2.0 2.0 1.236346736360778 1.9489700043360187 [Q{I|L}]{I|L}T{I|L}QWQ{I|L};[Q{I|L}]{I|L}TWQ{I|L}Q{I|L};[Q{I|L}]T{I|L}{I|L}QWQ{I|L};[Q{I|L}]{I|L}T{I|L}[AG]WQ{I|L};[Q{I|L}]{I|L}T{I|L}QW[AG]{I|L};[Q{I|L}]T{I|L}WQ{I|L}Q{I|L};[Q{I|L}]TW{I|L}Q{I|L}Q{I|L};[Q{I|L}]TWQ{I|L}{I|L}Q{I|L};[Q{I|L}]{I|L}TWQ{I|L}[AG]{I|L};[Q{I|L}]{I|L}TW[AG]{I|L}Q{I|L} 8.1569;7.7772;7.6417;7.3503;7.3503;7.262;7.2581;7.2134;6.9706;6.9706 -;-;-;-;-;-;-;-;-;- 6267 1 2.291 138235.3 0.4900000095367431 5466 4620 10084 SUDHL4_400M_050219_1,10088 SUDHL4_400M_050219_1,10088,QLIDKVWQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10089 56.657 171.0 69661.0 25 0 7378.5 + 34695 SPTETIFVE 9 34 1022.5012798488292 1021.4940033822292 1 1022.633227527142 MULTI CID FTMS 0 0 0 -1 0 5 Unmodified _SPTETIFVE_ REV__ENSG00000115414|ENST00000354785|FN1;REV__nc|ENSG00000115414|P02751-1|FN1;REV__nc|ENSG00000115414|P02751-10|FN1;REV__nc|ENSG00000115414|P02751-11|FN1;REV__nc|ENSG00000115414|P02751-12|FN1;REV__nc|ENSG00000115414|P02751-13|FN1;REV__nc|ENSG00000115414|P02751-14|FN1;REV__nc|ENSG00000115414|P02751-16|FN1;REV__nc|ENSG00000115414|P02751-17|FN1;REV__nc|ENSG00000115414|P02751-2|FN1;REV__nc|ENSG00000115414|P02751-3|FN1;REV__nc|ENSG00000115414|P02751-4|FN1;REV__nc|ENSG00000115414|P02751-5|FN1;REV__nc|ENSG00000115414|P02751-6|FN1;REV__nc|ENSG00000115414|P02751-7|FN1;REV__nc|ENSG00000115414|P02751-8|FN1;REV__nc|ENSG00000115414|P02751-9|FN1 11.640296217721598 0.521594087909532 5 {I|L}T 2 -1 11.555 0.0 0.0 1.1311 0.0 0.0 393.18292047382914 411.15293298892817 804.3358534627573 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 {I|L}T 1.1311 - 19 + 1 2.291 18025.5 1.0 5467 4620 10084 SUDHL4_400M_050219_1,10089 SUDHL4_400M_050219_1,10089,SPTETIFVE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10090 56.66 135.0 195600.0 25 0 11852.0 -1 PRCHRRRRRCC 11 69 835.4145995974541 0 835.4145995974541 PEAK CID FTMS 0 0 0 -1 0 6 3 Carbamidomethyl (C) _PRC(Carbamidomethyl (C))HRRRRRC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000409248.8_2_4:2043770-2044148:+|nuORF 0.0 0.4761840153648598 5 S 1 -1 6.9897 0.0 0.0 0.41884 0.0 0.0 1446.713753172644 132.04567896060783 1578.7594321332515 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.41884 - 4 + 1 2.291 24394.1 1.0 5468 4620 10084 SUDHL4_400M_050219_1,10090 SUDHL4_400M_050219_1,10090,PRCHRRRRRCC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 10091 56.662 90.0 190800.0 25 0 21265.0 -1 0 52 894.1237670779228 0 894.1237670779228 PEAK CID FTMS 0 0 0 -1 0 7 5 W 1 -1 2.4743 0.0 0.0 0.13852 0.0 0.0 1077.9980701892457 519.1355074518186 1597.1335776410642 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.13852 - 1 + 1 2.291 18163.4 1.0 5469 4620 10084 SUDHL4_400M_050219_1,10091 SUDHL4_400M_050219_1,10091, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10092 56.668 277.0 34270.0 25 0 2808.0 -1 YISIVDLC 8 27 982.4910247066708 981.4837482400708 1 982.4814330935478 MULTI CID FTMS 0 0 0 -1 0 8 Carbamidomethyl (C) _YISIVDLC(Carbamidomethyl (C))_ ENSG00000115137|ENST00000264711|DNAJC27 4.75600775471527 0.7954636275367004 5 V{I|L}[MT]{I|L} 5 -1 19.833 0.0 0.0 2.0207 0.0 0.0 406.1507740705094 0.0 406.1507740705094 0.0 14.348331157524967 0.0 0.0 0 0.0 0.0 0.0 0.0 V{I|L}[MT]{I|L} 2.0207 - 16 1 2.291 18286.3 1.0 5470 4620 10084 SUDHL4_400M_050219_1,10092 SUDHL4_400M_050219_1,10092,YISIVDLC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10094 56.684 800.0 99768.0 25 0 14334.0 + 9534 FLFPRSIDV 9 73 547.3056168774765 1092.596680821753 2 547.3049804568291 MULTI CID FTMS 0 0 0 10093 68122.7734375 0.6909556339685525 1 -0.0302352905273437 1 Unmodified _FLFPRSIDV_ ENSG00000106460|ENST00000396668|TMEM106B;ENST00000420833.5_1_7:12258097-12270062:+|nuORF 31.26834338654808 0.1333407332142048 5 P{M(Oxidation (M))|F}{I|L}E 4 7 33.175 0.0 0.0 3.0364 0.0 0.0 588.3260365216812 0.0 588.3260365216812 0.0 15.076381522919393 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{M(Oxidation (M))|F}{I|L}E 3.0364 - 44 1 2.291 66729.8 0.4300000071525574 5471 4621 10093 SUDHL4_400M_050219_1,10094 SUDHL4_400M_050219_1,10094,FLFPRSIDV False True FLFPRSIDV 56.684475 547.304980456829 740245.1875 10093.0 ENSG00000106460|ENST00000396668|TMEM106B;;ENST00000420833.5_1_7:12258097-12270062:+|nuORF 4.002441803614299 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10095 56.698 800.0 30586.0 25 0 2225.6 -1 0 62 1062.097083996965 0 1061.706957995892 PEAK CID FTMS 0 0 0 -1 0 2 5 G 1 -1 3.4949 0.0 0.0 0.16468 0.0 0.0 1542.963563890611 519.1619967096311 2062.1255606002424 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.16468 - 2 + 1 2.291 25660.5 0.4799999892711639 5472 4621 10093 SUDHL4_400M_050219_1,10095 SUDHL4_400M_050219_1,10095, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10099 56.722 800.0 116230.0 25 0 16371.0 + 20427 LLIENVASL 9 103 486.292203290682 970.569853648164 2 486.2920410037041 MULTI CID FTMS 0 0 0 10098 101373.375 0.2052871528556951 -12 0.2354660034179687 1 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 64.23631603340823 0.0237365939569086 5 {I|L}{I|L}{I|L}ENV 6 3 40.301 0.0 0.0 4.1523 0.0 0.0 0.0 286.14069040037026 286.14069040037026 10.0262462848831 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.2302046884880938 0.6861818737241735 + {I|L}{I|L}{I|L}ENV 4.1523 + + 895 1 2.291 75474.6 0.5799999833106995 5473 4624 10098 SUDHL4_400M_050219_1,10099 SUDHL4_400M_050219_1,10099,LLIENVASL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10100 56.736 800.0 235600.0 25 0 59680.0 + 37786 TLSERLWGL 9 106 537.8004819130256 1073.586410892851 2 537.8011352419853 MULTI CID FTMS 0 0 0 10098 105256.6796875 0.3702622385175148 -6 0.1203384399414062 2 Unmodified _TLSERLWGL_ ENSG00000100216|ENST00000216034|TOMM22;ENST00000416399.2_1_10:120403290-120403707:+|nuORF;ENST00000492561.1_1_22:39078186-39079843:+|nuORF;ENST00000498134.1_1_13:33528197-33528527:-|nuORF 114.20165948288296 0.0037743244297685 5 T{I|L}SER{I|L}WG{I|L} 9 0 + 101.74 0.0 0.0 9.4768 9.4768 96.841 0.0 0.0 0.0 50.67024086827658 14.09256854528806 14.09256854528806 12.07498109319512 0 2.774227503252014 2.0 0.6989700043360187 0.0 + + T{I|L}SER{I|L}WG{I|L};[{I|L}T]SER{I|L}WG{I|L};[{I|L}T][RD]T{I|L}WG{I|L};T{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PWG{I|L};[W{I|L}][VS]T{I|L}WG{I|L};[{I|L}T]SAA[KQ]WG{I|L};[W{I|L}]MR{I|L}WG{I|L};{[ES]|[DT]|[{I|L}C]}R{I|L}T{I|L}WG{I|L};[{I|L}T][RD]WG{I|L}T{I|L};[{I|L}T][RD]W[{I|L}T]G{I|L} 9.4768;8.3521;7.3321;6.4506;6.1904;5.941;5.6509;5.6148;5.1314;4.8455 +;+;-;-;-;-;-;-;-;- + 1765 + 1 2.291 146964.9 0.4799999892711639 5474 4624 10098 SUDHL4_400M_050219_1,10100 SUDHL4_400M_050219_1,10100,TLSERLWGL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10101 56.75 800.0 199270.0 25 0 7405.0 + 1790 ALSEMVEYI 9 123 1054.512923000733 1053.5056465341331 1 1054.514697253704 MULTI CID FTMS 0 0 0 10098 182075.4375 0.983711828370185 -3 0.0379409790039062 3 Unmodified _ALSEMVEYI_ ENSG00000078304|ENST00000694906|PPP2R5C;ENST00000553730.5_1_14:102276279-102348623:+|nuORF;nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C 89.42679046578446 0.015225546354407 5 [{I|L}A]SEMVEY{I|L} 9 0 + 90.927 0.0 0.0 8.6309 8.6309 91.297 0.0 0.0 0.0 14.291746928241125 16.478174818886373 14.291746928241125 5.6246936830415 0 0.5 1.6989700043360187 2.2104093769761874 0.0 + + [{I|L}A]SEMVEY{I|L};[{I|L}A]DTMVEY{I|L};[{I|L}A]SEMD{I|L}Y{I|L};[{I|L}A]SEMEVY{I|L};[{I|L}A]SEVMEY{I|L};[{I|L}A]DTMD{I|L}Y{I|L};[{I|L}A]DTMEVY{I|L};{NN|[MP]|[D{I|L}]|[EV]}TAMVEY{I|L};[{I|L}A]D{M(Oxidation (M))|F}A{I|L}EY{I|L};[{I|L}A]SEMDY{I|L}{I|L} 8.6309;8.097;7.9256;7.9165;7.4969;7.3917;7.3826;7.2743;7.1967;7.0938 +;-;-;-;-;-;-;-;-;- + 6255 1 2.291 101574.7 0.75 5475 4624 10098 SUDHL4_400M_050219_1,10101 SUDHL4_400M_050219_1,10101,ALSEMVEYI True True ALSEMVEYI 56.750112 1054.5146972537 1211080.25 10098.0 ENSG00000078304|ENST00000694906|PPP2R5C;;nc|ENSG00000078304|Q13362|PPP2R5C;;nc|ENSG00000078304|Q13362-3|PPP2R5C;;nc|ENSG00000078304|Q13362-4|PPP2R5C;;nc|ENSG00000078304|Q13362-5|PPP2R5C;;nc|ENSG00000078304|Q13362-2|PPP2R5C;;ENST00000553730.5_1_14:102276279-102348623:+|nuORF 5.4165544509887695 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10103 56.767 800.0 53681.0 25 0 3690.4 + 9704 FLSTINVGL 9 91 963.5508489029183 962.5435724363184 1 963.5560790896416 MULTI CID FTMS 0 0 0 10102 14385.12890625 0.1528030402991503 9 -0.2322616577148437 1 Unmodified _FLSTINVGL_ ENST00000483551.6_1_15:69072422-69081590:-|nuORF;ENST00000495420.5_1_15:69079601-69113141:-|nuORF;ENSG00000140350|ENST00000465139|ANP32A 30.63653989081413 0.1413794767160703 5 {[{M(Oxidation (M))|F}C]|[YS]}VV{I|L}NV{[VA]|[{I|L}G]} 9 3 + 20.819 0.0 0.0 2.1629 2.1629 76.373 0.0 0.0 0.0 0.7378621416091846 3.495080750030624 0.7378621416091846 4.291653770000824 0 0.3054621874040891 0.0 1.424742501084005 0.3807196863200844 {[{M(Oxidation (M))|F}C]|[YS]}VV{I|L}NV{[VA]|[{I|L}G]};{[NV]|[RG]}[{I|L}T][{M(Oxidation (M))|F}T]V{[VA]|[{I|L}G]};{[{M(Oxidation (M))|F}C]|[YS]}VV{I|L}GGV{[VA]|[{I|L}G]};[PG][Y{I|L}]{I|L}[KC]{[VA]|[{I|L}G]};{[QS]|[NT]}[{I|L}V][{M(Oxidation (M))|F}T]V{[VA]|[{I|L}G]};{[HG]|PP}[HV]{I|L}[KC]{[VA]|[{I|L}G]} 2.1629;1.717;0.81069;0.58516;0.30079;0.041933 -;-;-;-;-;- 234 1 2.291 37749.0 0.3700000047683716 5476 4625 10102 SUDHL4_400M_050219_1,10103 SUDHL4_400M_050219_1,10103,FLSTINVGL False False FLSTINVGL 56.766516 963.556079089642 744120.1875 10102.0 ENST00000483551.6_1_15:69072422-69081590:-|nuORF;;ENST00000495420.5_1_15:69079601-69113141:-|nuORF;;ENSG00000140350|ENST00000465139|ANP32A 2.3182618618011475 1.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10104 56.78 800.0 187420.0 25 0 39721.0 12552 GVGVLHGR 8 98 794.4658530471238 793.4585765805238 1 794.4654418826103 MULTI CID FTMS 0 0 0 10102 80074.71875 0.7480743382508358 4 -0.0628662109375 2 Unmodified _GVGVLHGR_ ENST00000587730.5_1_19:14520811-14521537:-|nuORF 0.7936320650641473 0.8195151834710337 5 {[TV]|[{I|L}S]}C(Carbamidomethyl (C)) 3 7 7.5798 0.0 0.0 0.95528 0.0 0.0 0.0 430.2900944850738 430.2900944850738 0.5900883619464325 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.0 {[TV]|[{I|L}S]}C(Carbamidomethyl (C)) 0.95528 - 35 1 2.291 104763.6 0.3400000035762787 5477 4625 10102 SUDHL4_400M_050219_1,10104 SUDHL4_400M_050219_1,10104,GVGVLHGR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 10107 56.801 800.0 125110.0 25 0 87138.0 -1 0 54 584.283003728153 583.2757272615529 1 584.2831298708916 MULTI CID FTMS 0 0 0 10106 110634.09375 1.0 0 0.0 1 5 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E 4 -1 20.891 0.0 0.0 3.5816 0.0 0.0 0.0 94.00073881844664 94.00073881844664 4.904630595263413 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}E 3.5816 - 23 1 2.291 82999.0 0.4099999964237213 5478 4627 10106 SUDHL4_400M_050219_1,10107 SUDHL4_400M_050219_1,10107, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10108 56.809 486.0 111730.0 25 0 4703.9 -1 0 89 917.4444889172256 0 917.4445068240166 PEAK CID FTMS 0 0 0 10106 84570.984375 0.9541343967609224 3 -0.0732955932617187 2 5 V 1 -1 4.6041 0.0 0.0 0.2512 0.0 0.0 1483.6635617194136 247.1206316359905 1730.784193355404 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.2512 - 10 + 1 2.291 40148.6 1.0 5479 4627 10106 SUDHL4_400M_050219_1,10108 SUDHL4_400M_050219_1,10108, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10111 56.829 800.0 33442.0 25 0 2007.5 -1 0 60 1036.8051413743574 0 1036.963183581829 PEAK CID FTMS 0 0 0 10110 19600.1640625 0.6026825852843791 1 -0.044525146484375 1 5 MQ 2 -1 5.802 0.0 0.0 0.28007 0.0 0.0 1368.2658480789898 441.2163179986938 1809.482166077684 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 MQ 0.28007 - 24 + 1 2.291 26659.3 0.5899999737739563 5480 4629 10110 SUDHL4_400M_050219_1,10111 SUDHL4_400M_050219_1,10111, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10112 56.843 800.0 46158.0 25 0 2750.2 -1 0 87 1195.2680763432777 0 1195.155200183392 PEAK CID FTMS 0 0 0 10110 28309.9453125 0.6380680500058767 -1 0.00390625 2 5 T 1 -1 6.9897 0.0 0.0 0.29264 0.0 0.0 1061.420966063705 1223.0070284479127 2284.4279945116177 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.29264 - 6 + 1 2.291 29413.2 0.6499999761581421 5481 4629 10110 SUDHL4_400M_050219_1,10112 SUDHL4_400M_050219_1,10112, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10113 56.849 334.0 70231.0 25 0 17604.0 -1 0 45 1093.5280575961758 0 1093.526293933392 PEAK CID FTMS 0 0 0 10110 106008.328125 1.0 0 0.0 3 5 P 1 -1 4.6041 0.0 0.0 0.21071 0.0 0.0 995.5102645070018 1089.4606417291627 2084.9709062361644 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.21071 - 5 + 1 2.291 25491.2 1.0 5482 4629 10110 SUDHL4_400M_050219_1,10113 SUDHL4_400M_050219_1,10113, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10114 56.858 461.0 40051.0 25 0 3183.2 -1 0 44 1057.845494632666 0 1058.012255847454 PEAK CID FTMS 0 0 0 10110 20948.587890625 1.0 0 0.0 4 5 W 1 -1 4.6041 0.0 0.0 0.21782 0.0 0.0 1257.2563446346696 667.3151240940074 1924.571468728677 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.21782 - 2 + 1 2.291 21287.2 1.0 5483 4629 10110 SUDHL4_400M_050219_1,10114 SUDHL4_400M_050219_1,10114, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10116 56.873 639.0 43535.0 25 0 14392.0 -1 0 42 993.5617553591728 0 993.5617553591728 PEAK CID FTMS 0 0 0 -1 0 1 5 D 1 -1 4.6041 0.0 0.0 0.23193 0.0 0.0 1325.7775501697142 541.2702120416624 1867.0477622113767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.23193 - 1 + 1 2.291 30306.5 1.0 5484 4630 10115 SUDHL4_400M_050219_1,10116 SUDHL4_400M_050219_1,10116, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10117 56.883 564.0 259340.0 25 0 35176.0 + 18299 KVLDFEHFL 9 109 574.3109033451319 1146.6072537570635 2 574.3104125857353 MULTI CID FTMS 0 0 0 10115 129556.640625 0.5178691680404062 -4 0.077178955078125 2 Unmodified _KVLDFEHFL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 110.79276546118962 0.005272472070827 5 KV{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L} 9 0 + 98.66 0.0 0.0 8.6045 8.6045 97.58 0.0 0.0 0.0 34.07267607174376 9.867078345216784 9.867078345216784 21.80478221209433 0 3.0356668758921828 1.2218487496163564 0.8494850021680094 0.0 + + KV{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};KV{I|L}D{M(Oxidation (M))|F}E{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};K{I|L}VD{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};{I|L}KVD{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}ED{I|L}VK{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}D{I|L}VK{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}ED{I|L}{M(Oxidation (M))|F}VK{I|L};K{I|L}VD{M(Oxidation (M))|F}E{I|L}{[{M(Oxidation (M))|F}H]|[RQ]};[{M(Oxidation (M))|F}E]HD{I|L}VK{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}ED{I|L}V{M(Oxidation (M))|F}K{I|L} 8.6045;6.7028;6.5377;6.1439;6.0265;4.9847;4.8257;4.6361;4.4942;4.4096 +;-;-;-;-;-;-;-;-;- + 1114 + 1 2.291 109923.5 1.0 5485 4630 10115 SUDHL4_400M_050219_1,10117 SUDHL4_400M_050219_1,10117,KVLDFEHFL True True KVLDFEHFL 56.88253 574.310412585735 1246480.375 10115.0 ENST00000548725.5_1_12:56552185-56553955:+|nuORF;;ENSG00000092841|ENST00000550697|MYL6;;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;;nc|ENSG00000092841|P60660-2|MYL6 7.211445967356364 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10118 56.893 569.0 218860.0 25 0 12769.0 + 15627 IQGLIVLAP 9 125 923.5920945471366 922.5848180805366 1 923.5930053591728 MULTI CID FTMS 0 0 0 10115 84828.6015625 0.7532039080366641 -4 0.077178955078125 3 Unmodified _IQGLIVLAP_ REV__ENST00000426528.5_1_X:102139368-102152590:+|nuORF 44.40701690623563 0.0526327925666318 5 {[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}{I|L}V 6 -1 50.539 0.0 0.0 5.4779 0.0 0.0 0.0 296.1602782215608 296.1602782215608 22.140686416907545 0.0 0.0 0.0 0 0.9247425010840048 1.154901959985743 0.0 1.0356668758921828 {[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}{I|L}V 5.4779 - 761 1 2.291 83366.5 1.0 5486 4630 10115 SUDHL4_400M_050219_1,10118 SUDHL4_400M_050219_1,10118,IQGLIVLAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10119 56.906 800.0 164550.0 25 0 31935.0 -1 0 80 877.0139428155823 1752.0133326979644 2 877.5162231326103 MULTI CID FTMS 0 0 0 10115 78497.671875 0.824763571161444 1 -0.0488624572753906 4 5 {I|L}QWV 4 -1 20.349 0.0 0.0 1.1615 0.0 0.0 628.373270297377 594.3248995416624 1222.698169839039 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {I|L}QWV 1.1615 - 46 + 1 2.291 94050.8 0.3400000035762787 5487 4630 10115 SUDHL4_400M_050219_1,10119 SUDHL4_400M_050219_1,10119, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10121 56.911 68.0 1473800.0 25 0 91422.0 + 29459 QLIDKVWQL 9 124 571.8320366511081 1141.649520369016 2 571.8321411013603 MULTI CID FTMS 0 0 0 10120 396513.40625 0.3285501062365857 5 -0.0952072143554687 1 Unmodified _QLIDKVWQL_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 176.83740622441886 5.184912498982613e-07 5 [Q{I|L}]{I|L}TAAVWQ{I|L} 10 3 + 82.89 0.0 0.0 7.2605 7.2605 88.437 0.0 0.0 0.0 20.444668031026268 16.53212513775344 16.53212513775344 4.318722087674658 0 1.674742501084005 2.0 1.5189301784845295 1.9049471895720984 [Q{I|L}]{I|L}TAAVWQ{I|L};[Q{I|L}]{I|L}TWQ{I|L}Q{I|L};[Q{I|L}]{I|L}T[Q{I|L}]WQ{I|L};[Q{I|L}]T{I|L}AAVWQ{I|L};[Q{I|L}]{I|L}TAAVW[AG]{I|L};[Q{I|L}]T{I|L}WQ{I|L}Q{I|L};[Q{I|L}]T{I|L}[Q{I|L}]WQ{I|L};[Q{I|L}]TW{I|L}Q{I|L}Q{I|L};[Q{I|L}]{I|L}TWQ{I|L}[AG]{I|L};[Q{I|L}]{I|L}TW[AG]{I|L}Q{I|L} 7.2605;6.8822;6.7353;6.7181;6.4578;6.3398;6.1929;6.0869;6.0757;6.0757 -;-;-;-;-;-;-;-;-;- 3664 1 2.291 80166.7 1.0 5488 4631 10120 SUDHL4_400M_050219_1,10121 SUDHL4_400M_050219_1,10121,QLIDKVWQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10122 56.925 800.0 203730.0 25 0 38252.0 + 44239 YLIEPDVEL 9 113 1090.567653858958 1089.560377392358 1 1090.567675769329 MULTI CID FTMS 0 0 0 10120 98482.015625 0.5734011545262613 -7 0.2003211975097656 2 Unmodified _YLIEPDVEL_ ENSG00000114098|ENST00000469044|ARMC8;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;ENST00000486832.1_1_3:137958292-137964088:+|nuORF;nc|ENSG00000114098|Q8IUR7-2|ARMC8;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-6|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8 112.59319219568356 0.0043923200227745 5 [DV]PEY{I|L}{I|L}E{I|L} 9 6 + 72.537 0.0 0.0 6.6575 6.6575 83.008 0.0 0.0 0.0 6.197887582883936 16.478174818886373 6.197887582883936 0.8534811358448735 0 0.2887254899964357 1.5228787452803376 1.360924374808178 0.0 [DV]PEY{I|L}{I|L}E{I|L};[DV]PE{I|L}Y{I|L}E{I|L};[DP]VEY{I|L}{I|L}E{I|L};[Y{I|L}]{I|L}E[DP]VE{I|L};[DP]VE{I|L}Y{I|L}E{I|L};[DV]EPY{I|L}{I|L}E{I|L};[DV]EP{I|L}Y{I|L}E{I|L};[DV]PEY{I|L}E{I|L}{I|L};[DV]PE{I|L}YE{I|L}{I|L};[DP]EVY{I|L}{I|L}E{I|L} 6.6575;6.5792;6.0887;6.0324;6.0103;5.9433;5.865;5.8177;5.7394;5.6115 -;-;-;+;-;-;-;-;-;- + 1880 1 2.291 105803.6 0.4000000059604645 5489 4631 10120 SUDHL4_400M_050219_1,10122 SUDHL4_400M_050219_1,10122,YLIEPDVEL True True YLIEPDVEL 56.925492 1090.56767576933 1015275.1875 10120.0 nc|ENSG00000114098|Q8IUR7-2|ARMC8;;ENST00000486832.1_1_3:137958292-137964088:+|nuORF;;nc|ENSG00000114098|Q8IUR7-3|ARMC8;;nc|ENSG00000114098|Q8IUR7-6|ARMC8;;ENSG00000114098|ENST00000469044|ARMC8;;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;;nc|ENSG00000114098|Q8IUR7-7|ARMC8 6.273951530456543 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10123 56.939 800.0 89025.0 25 0 4359.3 -1 0 121 906.8388549685478 0 906.8388549685478 PEAK CID FTMS 0 0 0 -1 0 3 5 E 1 -1 6.3515 0.0 0.0 0.35059 0.0 0.0 1328.392835882362 351.2034700983032 1679.5963059806652 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 E 0.35059 - 90 + 1 2.291 52731.3 0.3300000131130218 5490 4631 10120 SUDHL4_400M_050219_1,10123 SUDHL4_400M_050219_1,10123, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10124 56.953 800.0 62709.0 25 0 3022.5 -1 0 74 887.507824588674 0 887.8629638552666 PEAK CID FTMS 0 0 0 10120 27969.974609375 1.0 0 0.0 4 5 {M(Oxidation (M))|F}R{I|L} 3 -1 8.6721 0.0 0.0 0.48912 0.0 0.0 1060.6079786033035 293.1266268365844 1353.734605439888 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}R{I|L} 0.48912 - 37 + 1 2.291 39412.2 0.2899999916553497 5491 4631 10120 SUDHL4_400M_050219_1,10124 SUDHL4_400M_050219_1,10124, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10127 56.963 177.0 371690.0 25 0 50863.0 + 20428 LLIENVASL 9 87 486.292203290682 970.569853648164 2 486.2923766970634 MULTI CID FTMS 0 0 0 10126 489857.65625 0.99199107809251 -3 0.0997047424316406 1 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 39.957323273325 0.0756908302845263 5 {I|L}{I|L}ENVAS{I|L}{I|L} 9 2 + 41.072 0.0 0.0 4.2317 4.2317 75.374 0.0 0.0 0.0 10.916375079047494 3.99674684468792 3.99674684468792 0.4845500650402812 0 0.0 1.6989700043360187 0.0 0.9802046884880936 {I|L}{I|L}ENVAS{I|L}{I|L};{I|L}{I|L}EN{I|L}GS{I|L}{I|L};{I|L}{I|L}ENG{I|L}S{I|L}{I|L};{I|L}{I|L}{I|L}ENGS{I|L}{I|L};{I|L}{I|L}E{I|L}NGS{I|L}{I|L};{I|L}{I|L}[DN]{I|L}AS{I|L}{I|L};{I|L}{I|L}[DN]A{I|L}S{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}NV{I|L}AS{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}N{I|L}VAS{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}NVA{I|L}S{I|L}{I|L} 4.2317;4.1818;4.1542;3.8244;3.5142;3.4643;3.3867;3.107;3.0544;3.0294 -;-;-;-;-;-;-;-;-;- 1227 1 2.291 56920.2 1.0 5492 4633 10126 SUDHL4_400M_050219_1,10127 SUDHL4_400M_050219_1,10127,LLIENVASL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10128 56.97 376.0 159490.0 25 0 10371.0 + 15679 IQQLISIY 8 66 977.5668060267448 976.5595295601448 1 977.5662719607352 MULTI CID FTMS 0 0 0 10126 94853.5859375 0.7614999340812654 2 -0.0403060913085937 2 Unmodified _IQQLISIY_ REV__ENSG00000125864|ENST00000377873|BFSP1;REV__ENST00000492424.1_1_20:17487687-17492707:-|nuORF;REV__nc|ENSG00000125864|Q12934-2|BFSP1;REV__nc|ENSG00000125864|Q12934-3|BFSP1 32.30548876998284 0.3644845974844379 5 [QA]{I|L}AV{I|L}S{I|L}Y 9 -1 + 60.64 0.0 0.0 6.2095 6.2095 81.991 0.0 0.0 0.0 8.010299956639813 12.98332479720628 8.010299956639813 1.020599913279625 0 1.0 0.0 1.0 0.3807196863200844 [QA]{I|L}AV{I|L}S{I|L}Y;[QA]{I|L}VA{I|L}S{I|L}Y;[QA]{I|L}G{I|L}{I|L}S{I|L}Y;[Q{I|L}]AAV{I|L}S{I|L}Y;[Q{I|L}]AVA{I|L}S{I|L}Y;[QA]V{I|L}A{I|L}S{I|L}Y;{[QG]|[NA]}{I|L}{I|L}A{I|L}S{I|L}Y;[QA]VA{I|L}{I|L}S{I|L}Y;[Q{I|L}]AG{I|L}{I|L}S{I|L}Y;{[QG]|[NA]}{I|L}A{I|L}{I|L}S{I|L}Y 6.2095;6.105;5.8887;5.3893;5.2848;5.2848;5.081;5.0684;5.0684;4.8647 -;-;-;-;-;-;-;-;-;- 1619 1 2.291 47867.4 1.0 5493 4633 10126 SUDHL4_400M_050219_1,10128 SUDHL4_400M_050219_1,10128,IQQLISIY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10129 56.982 711.0 80004.0 25 0 3206.9 -1 0 76 1081.8676091004002 0 1081.865649402142 PEAK CID FTMS 0 0 0 10126 75571.3515625 0.6197403917374295 -1 0.0040206909179687 3 5 WP{I|L}A[WP]NMN 9 -1 19.307 0.0 0.0 0.89313 0.0 0.0 728.0370237654505 321.1571138971313 1049.194137662582 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WP{I|L}A[WP]NMN 0.89313 - 265 + 1 2.291 44310.8 1.0 5494 4633 10126 SUDHL4_400M_050219_1,10129 SUDHL4_400M_050219_1,10129, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10131 56.992 371.0 188130.0 25 0 46036.0 + 37787 TLSERLWGL 9 69 537.8004819130256 1073.586410892851 2 537.8010742068291 MULTI CID FTMS 0 0 0 10130 158954.890625 0.5591568516207783 4 -0.0271530151367187 1 Unmodified _TLSERLWGL_ ENSG00000100216|ENST00000216034|TOMM22;ENST00000416399.2_1_10:120403290-120403707:+|nuORF;ENST00000492561.1_1_22:39078186-39079843:+|nuORF;ENST00000498134.1_1_13:33528197-33528527:-|nuORF 40.23920728925047 0.0741434193262949 5 T{I|L}SER{I|L}WG{I|L} 9 0 + 76.978 0.0 0.0 7.1702 7.1702 96.938 0.0 0.0 0.0 69.9882781788208 12.587418566968154 12.587418566968154 76.977978222181 0 1.6677353201839438 2.0 0.0 0.0 + + T{I|L}SER{I|L}WG{I|L} 7.1702 + + 59 + 1 2.291 60255.5 1.0 5495 4634 10130 SUDHL4_400M_050219_1,10131 SUDHL4_400M_050219_1,10131,TLSERLWGL True True TLSERLWGL 56.991602 537.801074206829 3820552.75 10130.0 ENSG00000100216|ENST00000216034|TOMM22;;ENST00000416399.2_1_10:120403290-120403707:+|nuORF;;ENST00000498134.1_1_13:33528197-33528527:-|nuORF;;ENST00000492561.1_1_22:39078186-39079843:+|nuORF 7.130392074584961 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10132 56.998 323.0 316590.0 25 0 34060.0 + 29461 QLIDKVWQL 9 101 1142.6560700013065 1141.6487935347063 1 1142.658496081829 MULTI CID FTMS 0 0 0 10130 76195.53125 0.2451208696510622 5 -0.0312156677246093 2 Unmodified _QLIDKVWQL_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 89.40071534611396 0.0152361884002446 5 [Q{I|L}]{I|L}DKVWQ{I|L} 9 0 + 97.273 0.0 0.0 8.5204 8.5204 94.694 0.0 0.0 0.0 5.642492736872597 79.34115329172698 5.642492736872597 9.208187539523747 0 0.8252574989159953 0.0 1.841129063296272 1.5994850021680094 + + [Q{I|L}]{I|L}DKVWQ{I|L};[Q{I|L}]{I|L}DKV{[DA]|[EG]}Q{I|L};[Q{I|L}]{I|L}DKVW[AG]{I|L};[Q{I|L}]{I|L}DKV{[DA]|[EG]}[AG]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[Q{I|L}]VWQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}V[RV]VWQ{I|L};[Q{I|L}]T[RV]VWQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[Q{I|L}]VW[AG]{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[Q{I|L}]V{[DA]|[EG]}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}V[RV]V{[DA]|[EG]}Q{I|L} 8.5204;7.7138;7.7138;6.9111;6.3802;6.226;5.6288;5.5737;5.5737;5.4194 +;-;-;-;-;-;-;-;-;- + 501 1 2.291 66906.5 1.0 5496 4634 10130 SUDHL4_400M_050219_1,10132 SUDHL4_400M_050219_1,10132,QLIDKVWQL True True QLIDKVWQL 56.997512 1142.65849608183 26041344.875 10130.0 nc|ENSG00000129657|Q92503-3|SEC14L1;;nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;ENST00000587491.5_1_17:75207779-75210102:+|nuORF 6.688157558441162 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10138 57.03 800.0 324600.0 25 0 10375.0 + 34419 SLVQLLSAP 9 162 927.5511020737424 926.5438256071424 1 927.5517455935478 MULTI CID FTMS 0 0 0 10137 24622.6875 0.0368243648392245 -16 0.3113517761230469 1 Unmodified _SLVQLLSAP_ ENSG00000014914|ENST00000439741|MTMR11;nc|ENSG00000014914|A4FU01-4|MTMR11 99.79894945604345 0.0109923542231827 5 {[TV]|[{I|L}S]}VQ{I|L}TV[PA] 9 2 + 66.391 0.0 0.0 7.1654 7.1654 83.738 0.0 0.0 0.0 10.6361745692963 5.642492736872597 5.642492736872597 0.6098558049480971 0 1.5264209843288905 1.154901959985743 1.7783773187068794 0.2742275032520141 {[TV]|[{I|L}S]}VQ{I|L}TV[PA];{[TV]|[{I|L}S]}VQT{I|L}V[PA];{[TV]|[{I|L}S]}QV{I|L}TV[PA];{[TV]|[{I|L}S]}QVT{I|L}V[PA];{[TV]|[{I|L}S]}Q{I|L}VTV[PA];{[TV]|[{I|L}S]}Q{I|L}S{I|L}V[PA];{[TV]|[{I|L}S]}{I|L}N{I|L}TV[PA];{[TV]|[{I|L}S]}{I|L}NT{I|L}V[PA];{[TV]|[{I|L}S]}QV{I|L}S{I|L}[PA];{[TV]|[{I|L}S]}VTQ{I|L}V[PA] 7.1654;7.0996;6.8168;6.7509;6.6153;6.5495;6.4044;6.3386;6.2846;6.2469 -;-;-;-;-;-;-;-;-;- 4700 1 2.291 164834.8 0.6200000047683716 5497 4639 10137 SUDHL4_400M_050219_1,10138 SUDHL4_400M_050219_1,10138,SLVQLLSAP True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10142 57.047 378.0 349850.0 25 0 50856.0 + 20444 LLIPGLATA 9 111 868.5504037338953 867.5431272672953 1 870.5571777224541 MULTI CID FTMS 0 0 0 10141 246532.53125 0.5500663018542347 10 -0.13818359375 1 Unmodified _LLIPGLATA_ ENSG00000125356|ENST00000371437|NDUFA1 23.1484247019978 0.2366544122328345 5 ST{I|L} 3 8 20.177 0.0 0.0 2.3258 0.0 0.0 0.0 563.3476046197874 563.3476046197874 7.971062485323515 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ST{I|L} 2.3258 - 277 + 1 2.291 91592.3 1.0 5498 4642 10141 SUDHL4_400M_050219_1,10142 SUDHL4_400M_050219_1,10142,LLIPGLATA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10145 57.056 122.0 589830.0 25 0 21428.0 + 12061 GQFDGLVEL 9 122 977.4953968510796 976.4881203844794 1 977.4939453005792 MULTI CID FTMS 0 0 0 10144 219479.6875 1.0 0 0.0 1 Unmodified _GQFDGLVEL_ ENSG00000074370|ENST00000397041|ATP2A3;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3 75.76082778847304 0.0188720312721366 5 {[QG]|[NA]}{M(Oxidation (M))|F}DG{I|L}VE{I|L} 9 0 + 63.839 0.0 0.0 6.5376 6.5376 82.128 0.0 0.0 0.0 0.489634511125061 16.478174818886373 0.489634511125061 0.489634511125061 0 0.3252574989159953 0.0 0.9802046884880936 1.416386562212267 + + {[QG]|[NA]}{M(Oxidation (M))|F}DG{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{[QG]|[NA]}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}GV{M(Oxidation (M))|F}{[QG]|[NA]}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}E]{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}V{[QG]|[NA]}E{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}{[RE]|[WV]}VE{I|L};[PS]T{M(Oxidation (M))|F}{[QG]|[NA]}VE{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}D[R{I|L}]E{I|L};[PS]KA[W{M(Oxidation (M))|F}]E{I|L};[PS]TV{M(Oxidation (M))|F}{[QG]|[NA]}E{I|L} 6.5376;6.4875;5.9335;5.743;5.3733;5.1128;4.7476;4.4336;4.1992;4.1937 +;-;-;-;-;-;-;-;-;- + 1653 1 2.291 53636.7 1.0 5499 4644 10144 SUDHL4_400M_050219_1,10145 SUDHL4_400M_050219_1,10145,GQFDGLVEL True True GQFDGLVEL 57.055991 977.493945300579 896714.9375 10144.0 nc|ENSG00000074370|Q93084-3|ATP2A3;;ENSG00000074370|ENST00000397041|ATP2A3;;nc|ENSG00000074370|Q93084-1|ATP2A3;;nc|ENSG00000074370|Q93084-4|ATP2A3;;nc|ENSG00000074370|Q93084-6|ATP2A3;;nc|ENSG00000074370|Q93084-5|ATP2A3;;nc|ENSG00000074370|Q93084-7|ATP2A3 5.492900371551514 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10146 57.06 192.0 290420.0 25 0 13327.0 36970 TFEVATCVSP 10 109 1053.4900788070336 1052.4828023404336 1 1053.484545886517 MULTI CID FTMS 0 0 0 10144 164813.796875 1.0 0 0.0 2 Unmodified _TFEVATCVSP_ ENSG00000196531|ENST00000454682|NACA;nc|ENSG00000196531|E9PAV3-2|NACA 13.90604991867851 0.6142120002215601 5 [{M(Oxidation (M))|F}E]TV[TA]W{[CP]|[EA]} 9 5 + 26.589 0.0 0.0 2.5263 2.5263 81.842 0.0 0.0 0.0 7.147642715192507 21.104699792700576 7.147642715192507 9.208187539523752 0 0.5 0.0 0.9247425010840048 0.0 [{M(Oxidation (M))|F}E]TV[TA]W{[CP]|[EA]};[{M(Oxidation (M))|F}E]TV[TA]{[DA]|[EG]}{[CP]|[EA]};[{M(Oxidation (M))|F}E]TV[PG]{[CT]|[{M(Oxidation (M))|F}G]}{[CP]|[EA]};[{M(Oxidation (M))|F}E]T[RP]{[CT]|[{M(Oxidation (M))|F}G]}{[CP]|[EA]};[QP][HN][TA]W{[CP]|[EA]};[NP][HQ][TA]W{[CP]|[EA]} 2.5263;1.6514;1.3491;1.0144;0.79454;0.50852 -;-;-;-;-;- 136 1 2.291 41653.8 1.0 5500 4644 10144 SUDHL4_400M_050219_1,10146 SUDHL4_400M_050219_1,10146,TFEVATCVSP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10147 57.068 443.0 46451.0 25 0 4233.8 + 1064 AGHDLLLQVI 10 52 539.8167513161591 1077.618949699118 2 539.8166992068291 MULTI CID FTMS 0 0 0 10144 199563.046875 1.0 0 0.0 3 Unmodified _AGHDLLLQVI_ REV__ENSG00000100124|ENST00000215941|ANKRD54 10.073929032068715 0.6785112666868882 5 [{I|L}A]G[HD]{I|L}{I|L}V[Q{I|L}] 10 -1 + 38.204 0.0 0.0 3.5453 3.5453 85.128 0.0 0.0 0.0 15.070844780971054 7.269987279362624 7.269987279362624 15.070844780971054 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A]G[HD]{I|L}{I|L}V[Q{I|L}];[Q{I|L}][HD]{I|L}{I|L}V[Q{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}V[Q{I|L}];{[QN]|[E{I|L}]|[KN]}[HN]{I|L}{I|L}V[Q{I|L}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{I|L}V[Q{I|L}];[HQ]{NN|[MP]|[D{I|L}]|[EV]}{I|L}{I|L}V[Q{I|L}] 3.5453;2.1467;1.9833;1.8674;1.704;1.588 -;-;-;-;-;- 57 1 2.291 21706.8 1.0 5501 4644 10144 SUDHL4_400M_050219_1,10147 SUDHL4_400M_050219_1,10147,AGHDLLLQVI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10148 57.081 800.0 89248.0 25 0 45263.0 + 17177 KLKEEKRKRIR 11 43 742.4833035604154 0 742.4836303591728 PEAK CID FTMS 0 0 0 10144 190942.171875 1.0 0 0.0 4 Unmodified _KLKEEKRKRIR_ REV__ENSG00000198604|ENST00000360310|BAZ1A;REV__nc|ENSG00000198604|Q9NRL2-2|BAZ1A 0.3070304955306653 0.4761840153648598 5 D 1 -1 6.9897 0.0 0.0 0.47134 0.0 0.0 741.4748971029959 623.4269699916514 1364.9018670946473 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.47134 - 5 + 1 2.291 54063.2 0.5699999928474426 5502 4644 10144 SUDHL4_400M_050219_1,10148 SUDHL4_400M_050219_1,10148,KLKEEKRKRIR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10149 57.087 318.0 38680.0 25 0 2144.7 -1 0 35 1125.646166980267 0 1125.646166980267 PEAK CID FTMS 0 0 0 -1 0 5 5 V 1 -1 3.9794 0.0 0.0 0.17692 0.0 0.0 1304.8410877673716 842.3496798150999 2147.1907675824714 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.17692 - 1 + 1 2.291 16695.3 1.0 5503 4644 10144 SUDHL4_400M_050219_1,10149 SUDHL4_400M_050219_1,10149, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10150 57.101 800.0 30365.0 25 0 840.03 -1 0 58 760.1049682497978 0 760.1049682497978 PEAK CID FTMS 0 0 0 -1 0 6 5 H 1 -1 3.0989 0.0 0.0 0.20412 0.0 0.0 586.9477772204956 791.1726778619749 1378.1204550824705 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.20412 - 2 + 1 2.291 24982.0 0.5 5504 4644 10144 SUDHL4_400M_050219_1,10150 SUDHL4_400M_050219_1,10150, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10152 57.119 787.0 247050.0 25 0 58002.0 + 37468 TLFDYEVRL 9 91 578.3058258976785 1154.5970988621568 2 578.3061401247978 MULTI CID FTMS 0 0 0 10151 167198.3125 0.5285554092270718 -8 0.09564208984375 1 Unmodified _TLFDYEVRL_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1;UHRF1-KDM4B|1|fusion;UHRF1-KDM4B|2|fusion 89.40071534611396 0.0152361884002446 5 T{I|L}{M(Oxidation (M))|F}DYEV[R{I|L}] 9 0 + 108.21 0.0 0.0 9.3725 9.3725 93.779 0.0 0.0 0.0 36.47817481888637 8.907854813243986 8.907854813243986 8.907854813243986 0 1.1861818737241734 2.0 0.7302046884880937 1.4436726795685342 + + T{I|L}{M(Oxidation (M))|F}DYEV[R{I|L}];T{I|L}{M(Oxidation (M))|F}DYE{I|L}[RV];T{I|L}{M(Oxidation (M))|F}D{I|L}YD[R{I|L}];T{I|L}{M(Oxidation (M))|F}DY{I|L}D[R{I|L}];T{I|L}{M(Oxidation (M))|F}{I|L}DYD[R{I|L}];T{I|L}{M(Oxidation (M))|F}D{I|L}YE[RV];T{I|L}{M(Oxidation (M))|F}DY{I|L}E[RV];T{I|L}{M(Oxidation (M))|F}{I|L}DYE[RV];T{I|L}{I|L}{M(Oxidation (M))|F}DYD[R{I|L}];T{I|L}{M(Oxidation (M))|F}D{I|L}YAA{[QN]|[E{I|L}]|[KN]} 9.3725;8.601;8.3997;8.3959;8.1119;7.6282;7.6244;7.3404;7.2188;6.7864 +;-;-;-;-;-;-;-;-;- + 1215 + 1 2.291 147335.6 1.0 5505 4645 10151 SUDHL4_400M_050219_1,10152 SUDHL4_400M_050219_1,10152,TLFDYEVRL True True TLFDYEVRL 57.118601 578.306140124798 1450068.875 10151.0 chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;;UHRF1-KDM4B|2|fusion;;UHRF1-KDM4B|1|fusion;;nc|ENSG00000276043|Q96T88-2|UHRF1;;ENSG00000276043|ENST00000650932|UHRF1 6.690426349639893 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10156 57.143 800.0 158600.0 25 0 9124.1 + 8967 FAPLGNLLY 9 132 1007.5558494429428 1006.5485729763428 1 1007.55723875761 MULTI CID FTMS 0 0 0 10155 42389.6171875 0.0773874466533084 18 -0.2469482421875 1 Unmodified _FAPLGNLLY_ ENSG00000255690|ENST00000539664|TRIL 38.15118350030904 0.0856056900103839 5 [PA]N{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y 9 4 + 74.98 0.0 0.0 7.4492 7.4492 89.163 0.0 0.0 0.0 5.686362358410122 16.478174818886373 5.686362358410122 4.771212547196626 0 0.0 1.0457574905606752 0.0 1.7689301784845295 [PA]N{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y;[PA]N{M(Oxidation (M))|F}{I|L}{I|L}G{I|L}Y;[PA]{M(Oxidation (M))|F}N{I|L}G{I|L}{I|L}Y;[NP]A{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y;[PA]N{M(Oxidation (M))|F}G{I|L}{I|L}{I|L}Y;[PA]{M(Oxidation (M))|F}N{I|L}{I|L}G{I|L}Y;[PG]Q{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y;[QP]G{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y;[NP]A{M(Oxidation (M))|F}{I|L}{I|L}G{I|L}Y;[PA]G{M(Oxidation (M))|F}{I|L}N{I|L}{I|L}Y 7.4492;6.9752;6.9752;6.8842;6.649;6.5011;6.4102;6.4102;6.4102;6.3652 -;-;-;-;-;-;-;-;-;- 4607 1 2.291 85112.2 0.5 5506 4648 10155 SUDHL4_400M_050219_1,10156 SUDHL4_400M_050219_1,10156,FAPLGNLLY True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10157 57.157 800.0 31708.0 25 0 1594.1 -1 0 58 792.7087145945218 0 792.6827270388603 PEAK CID FTMS 0 0 0 -1 0 2 5 PPPPPY 6 -1 15.839 0.0 0.0 1.0003 0.0 0.0 740.971309949006 191.08393274478752 932.0552426937936 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPPPY 1.0003 - 139 + 1 2.291 27867.7 0.3300000131130218 5507 4648 10155 SUDHL4_400M_050219_1,10157 SUDHL4_400M_050219_1,10157, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10160 57.172 500.0 141320.0 25 0 9267.8 + 29460 QLIDKVWQL 9 117 571.8320366511081 1141.649520369016 2 571.8321411013603 MULTI CID FTMS 0 0 0 10159 133721.625 0.1108014342198017 24 -0.3109359741210937 1 Unmodified _QLIDKVWQL_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 147.05914393524117 0.0331831824667063 5 [Q{I|L}]{I|L}TWQ{I|L}Q{I|L} 9 4 + 75.089 0.0 0.0 6.5773 6.5773 84.636 0.0 0.0 0.0 17.365106915720183 16.478174818886373 16.478174818886373 2.2577249674798594 0 1.25 1.6989700043360187 0.9802046884880936 0.9476212463643424 [Q{I|L}]{I|L}TWQ{I|L}Q{I|L};[Q{I|L}]{I|L}T[Q{I|L}]WQ{I|L};[Q{I|L}]T{I|L}WQ{I|L}Q{I|L};[Q{I|L}]T{I|L}[Q{I|L}]WQ{I|L};[Q{I|L}]TW{I|L}Q{I|L}Q{I|L};[Q{I|L}]{I|L}TW[AG]{I|L}Q{I|L};[Q{I|L}]{I|L}TWQ{I|L}[AG]{I|L};[Q{I|L}]{I|L}T[Q{I|L}]W[AG]{I|L};[Q{I|L}]{I|L}{[CA]|SS}{I|L}Q{I|L}Q{I|L};[Q{I|L}]TWQ{I|L}{I|L}Q{I|L} 6.5773;6.3795;6.007;5.8092;5.788;5.7707;5.7707;5.5729;5.5517;5.5243 -;-;-;-;-;-;-;-;-;- 1676 1 2.291 57210.2 1.0 5508 4650 10159 SUDHL4_400M_050219_1,10160 SUDHL4_400M_050219_1,10160,QLIDKVWQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10163 57.193 800.0 151300.0 25 0 18769.0 + 39809 VETAVLMSLC 10 118 533.2689752373464 1064.5233975414926 2 533.2697021365166 MULTI CID FTMS 0 0 0 10162 39264.55859375 0.1835423652555749 -4 0.049652099609375 1 Unmodified _VETAVLMSLC_ REV__ENSG00000198915|ENST00000395810|RASGEF1A;REV__nc|ENSG00000198915|Q8N9B8-2|RASGEF1A 29.081581746732265 0.3152867722954398 5 [{I|L}A]TDV{I|L} 6 -1 43.082 0.0 0.0 4.0471 0.0 0.0 0.0 449.15142423510514 449.15142423510514 15.008050864996058 0.0 0.0 0.0 0 0.7302046884880937 2.0 1.2134679910804405 0.0 [{I|L}A]TDV{I|L} 4.0471 - 917 1 2.291 100378.9 0.959999978542328 5509 4652 10162 SUDHL4_400M_050219_1,10163 SUDHL4_400M_050219_1,10163,VETAVLMSLC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10166 57.213 800.0 106520.0 25 0 12873.0 + 20330 LLFEGEKITI 10 93 581.8396235692595 1161.664694205319 2 581.8394653201103 MULTI CID FTMS 0 0 0 10165 64958.7421875 0.6451398379127395 1 -0.0296669006347656 1 Unmodified _LLFEGEKITI_ ENSG00000168255|ENST00000513506|POLR2J3;ENSG00000228049|ENST00000333432|POLR2J2;ENST00000504101.1_1_7:102210280-102212998:-|nuORF;nc|ENSG00000228049|Q9GZM3-2|POLR2J2;nc|ENSG00000285437|Q9H1A7|POLR2J3 48.56086444690353 0.0885974549041194 5 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}T{I|L} 7 5 78.185 0.0 0.0 6.7304 0.0 0.0 0.0 311.13633142642817 311.13633142642817 47.14939275835518 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.9749073637206092 0.0 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}T{I|L} 6.7304 - 739 + 1 2.291 68273.0 0.3700000047683716 5510 4654 10165 SUDHL4_400M_050219_1,10166 SUDHL4_400M_050219_1,10166,LLFEGEKITI True True LLFEGEKITI 57.212834 581.83946532011 461915.8125 10165.0 ENSG00000228049|ENST00000333432|POLR2J2;;ENST00000504101.1_1_7:102210280-102212998:-|nuORF;;nc|ENSG00000285437|Q9H1A7|POLR2J3;;nc|ENSG00000228049|Q9GZM3-2|POLR2J2;;ENSG00000168255|ENST00000513506|POLR2J3 4.117325305938721 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10167 57.227 800.0 246830.0 25 0 10323.0 + -1 SESPIVVVL 9 132 942.5507459247892 0 942.5526611208916 PEAK CID FTMS 0 0 0 10165 74658.328125 0.222569886769208 10 -0.1573028564453125 2 ENSG00000140612|ENST00000268220|SEC11A;nc|ENSG00000140612|P67812-3|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A;ENSG00000166562|ENST00000587834|SEC11C;nc|ENSG00000140612|P67812-2|SEC11A;ENST00000585864.1_1_18:56807180-56819918:+|nuORF 5 VV{[ES]|[DT]|[{I|L}C]}SV 6 -1 24.654 0.0 0.0 1.3092 0.0 0.0 1072.6340205118545 207.11438928775627 1279.7484097996105 0.0 0.0 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 VV{[ES]|[DT]|[{I|L}C]}SV 1.3092 - 524 + 1 2.291 122072.0 0.3199999928474426 5511 4654 10165 SUDHL4_400M_050219_1,10167 SUDHL4_400M_050219_1,10167, False False SESPIVVVL 57.226682 942.552661120892 2236748.5 10165.0 ENSG00000140612|ENST00000268220|SEC11A;;nc|ENSG00000140612|P67812-3|SEC11A;;nc|ENSG00000140612|P67812-4|SEC11A;;ENSG00000166562|ENST00000587834|SEC11C;;nc|ENSG00000140612|P67812-2|SEC11A;;ENST00000585864.1_1_18:56807180-56819918:+|nuORF 7.17380952835083 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10169 57.232 184.0 231590.0 25 0 4524.2 -1 0 93 1081.5290960393909 3241.565458718372 3 1081.865039050579 MULTI CID FTMS 0 0 0 10168 97331.9921875 0.2939789749909294 9 -0.1276359558105468 1 5 [QP]V 3 -1 7.4473 0.0 0.0 0.22974 0.0 0.0 0.0 2914.361820372922 2914.361820372922 4.348331157524969 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [QP]V 0.22974 - 15 1 2.291 33545.8 1.0 5512 4655 10168 SUDHL4_400M_050219_1,10169 SUDHL4_400M_050219_1,10169, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10170 57.246 800.0 57468.0 25 0 6803.5 + 20429 LLIENVASL 9 84 486.292203290682 970.569853648164 2 486.2924987673759 MULTI CID FTMS 0 0 0 10168 50501.74609375 0.1022690590091053 19 -0.245574951171875 2 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 48.345845343767074 0.0439967357579942 5 {I|L}{I|L}[DN]{I|L}{I|L}AS{I|L} 9 4 {I|L}{I|L}[DN]{I|L}{I|L} + + 31.753 31.7 4.6521 3.2715 3.2715 54.664 0.0 0.0 0.0 0.0 8.286728014391471 0.0 0.0 0 0.5 0.0 0.7059771852360797 0.0 {I|L}{I|L}[DN]{I|L}{I|L}AS{I|L} 3.2715 - 237 + 1 2.291 42065.2 0.3700000047683716 5513 4655 10168 SUDHL4_400M_050219_1,10170 SUDHL4_400M_050219_1,10170,LLIENVASL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10171 57.249 163.0 29771.0 25 0 3264.9 -1 0 17 987.6362182497978 0 987.6362182497978 PEAK CID FTMS 0 0 0 -1 0 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.291 15964.0 1.0 5514 4655 10168 SUDHL4_400M_050219_1,10171 SUDHL4_400M_050219_1,10171, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10172 57.258 491.0 86168.0 25 0 3804.3 -1 0 96 880.639519329846 0 880.8321411013603 PEAK CID FTMS 0 0 0 -1 0 4 5 {I|L} 1 -1 6.9897 0.0 0.0 0.39731 0.0 0.0 1331.0373261579357 312.1200350397094 1643.157361197645 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.39731 - 20 + 1 2.291 33886.4 1.0 5515 4655 10168 SUDHL4_400M_050219_1,10172 SUDHL4_400M_050219_1,10172, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10174 57.275 747.0 79438.0 25 0 5270.0 -1 0 127 875.5178219013293 0 875.1144286990166 PEAK CID FTMS 0 0 0 10173 33217.7265625 0.9473679871553264 -1 0.0318946838378906 1 5 T 1 -1 5.4846 0.0 0.0 0.31358 0.0 0.0 1422.8605816915272 222.08962427310783 1644.950205964635 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.31358 - 21 + 1 2.319 42419.9 1.0 5516 4656 10173 SUDHL4_400M_050219_1,10174 SUDHL4_400M_050219_1,10174, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10175 57.28 292.0 166210.0 25 0 18752.0 + 34384 SLTSLSLSV 9 70 906.5142036048312 905.5069271382312 1 906.5104858279228 MULTI CID FTMS 0 0 0 10173 209698.671875 0.4665036910572531 9 -0.0996360778808593 2 Unmodified _SLTSLSLSV_ ENST00000467638.1_1_7:139757417-139762332:-|nuORF 78.14939416004806 0.0179651292570206 5 {[TV]|[{I|L}S]}TS{I|L}{I|L}S[VS] 9 2 + 52.162 0.0 0.0 5.7606 5.7606 82.163 0.0 0.0 0.0 5.642492736872597 6.417046634221322 5.642492736872597 1.9453781259591096 0 0.7614393726401688 0.0 2.4247425010840047 0.0 {[TV]|[{I|L}S]}TS{I|L}{I|L}S[VS];{[TV]|[{I|L}S]}T{I|L}S{I|L}S[VS];{[TV]|[{I|L}S]}TS{I|L}S{I|L}[VS];{[TV]|[{I|L}S]}T{I|L}SS{I|L}[VS];{[TV]|[{I|L}S]}TS{I|L}SV{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}T{I|L}SSV{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}T{I|L}{[WT]|[RM]}[VS];{[TV]|[{I|L}S]}T{[WT]|[RM]}{I|L}[VS];{[TV]|[{I|L}S]}T{[WT]|[RM]}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[HK][HV][VS] 5.7606;5.5457;5.0674;4.8526;3.9752;3.7604;2.3638;2.08;0.9878;0.12974 -;-;+;-;-;-;-;-;-;- + 294 1 2.319 41317.5 1.0 5517 4656 10173 SUDHL4_400M_050219_1,10175 SUDHL4_400M_050219_1,10175,SLTSLSLSV True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 10178 57.301 800.0 212260.0 25 0 7147.4 -1 0 151 791.373306915368 2371.098091346304 3 791.7069579958916 MULTI CID FTMS 0 0 0 10177 61230.5 0.460125581489828 -16 0.24627685546875 1 5 {[HG]|PP}APPGDCNG{[VA]|[{I|L}G]}GM 14 -1 42.067 0.0 0.0 1.7742 0.0 0.0 0.0 1104.5446048143533 1104.5446048143533 3.39334340971746 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.75 0.0 {[HG]|PP}APPGDCNG{[VA]|[{I|L}G]}GM 1.7742 - 20127 1 2.319 123269.8 0.3000000119209289 5518 4658 10177 SUDHL4_400M_050219_1,10178 SUDHL4_400M_050219_1,10178, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10179 57.308 432.0 236140.0 25 0 14370.0 + 20430 LLIENVASL 9 96 971.5771270356372 970.569850569037 1 971.5740234255792 MULTI CID FTMS 0 0 0 10177 214617.359375 0.0634076910690946 29 -0.3317985534667969 2 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 103.41943736471065 0.0091853052135676 5 {I|L}{I|L}ENV{I|L}AS{I|L} 9 2 + 92.321 0.0 0.0 9.512 9.512 90.707 0.0 0.0 0.0 7.913004791563878 16.478174818886373 7.913004791563878 4.230078252872488 0 0.8388903526330403 1.3010299956639813 0.3807196863200844 1.9489700043360187 {I|L}{I|L}ENV{I|L}AS{I|L};{I|L}{I|L}{I|L}ENVAS{I|L};{I|L}{I|L}[DN]{I|L}{I|L}AS{I|L};{I|L}{I|L}EN{I|L}VAS{I|L};{[NV]|[RG]}E{I|L}{I|L}{I|L}AS{I|L};{I|L}{I|L}ENVA{I|L}S{I|L};{I|L}{I|L}E{I|L}NVAS{I|L};{I|L}{I|L}{I|L}[DN]{I|L}AS{I|L};{[QN]|[E{I|L}]|[KN]}NV{I|L}{I|L}AS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}{I|L}{I|L}AS{I|L} 9.512;9.0762;8.9981;8.9429;8.6967;8.6735;8.59;8.429;8.3616;8.2867 -;+;-;-;-;-;-;-;-;- + 3619 1 2.319 73942.7 1.0 5519 4658 10177 SUDHL4_400M_050219_1,10179 SUDHL4_400M_050219_1,10179,LLIENVASL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10180 57.322 800.0 33084.0 25 0 1912.2 -1 0 79 921.7850971565638 0 921.3423950076104 PEAK CID FTMS 0 0 0 -1 0 3 5 M 1 -1 3.4949 0.0 0.0 0.18978 0.0 0.0 994.0919095457464 713.3810518854124 1707.4729614311586 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.18978 - 9 + 1 2.319 23015.1 0.3799999952316284 5520 4658 10177 SUDHL4_400M_050219_1,10180 SUDHL4_400M_050219_1,10180, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10186 57.354 662.0 72041.0 25 0 8794.8 -1 0 46 1186.554716532621 2371.094880132041 2 1187.055590808392 MULTI CID FTMS 0 0 0 10185 58694.3515625 0.6654439645910345 1 -0.0154380798339843 1 5 {[HG]|PP}YPPPPP 8 -1 43.136 0.0 0.0 1.8192 0.0 0.0 0.0 1525.642838264948 1525.642838264948 23.42645577637704 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {[HG]|PP}YPPPPP 1.8192 - 154 1 2.319 38005.5 1.0 5521 4663 10185 SUDHL4_400M_050219_1,10186 SUDHL4_400M_050219_1,10186, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10189 57.374 800.0 51272.0 25 0 6669.2 + -1 MLSPFISSV 9 51 980.5116720990636 0 980.5115844607352 PEAK CID FTMS 0 0 0 10188 93009.90625 0.9059765865305736 -1 0.0038948059082031 1 nc|ENSG00000158019|Q9NXR7-4|BABAM2;nc|ENSG00000158019|Q9NXR7-1|BABAM2;ENST00000492702.1_1_2:28117423-28117564:+|nuORF;nc|ENSG00000158019|Q9NXR7-3|BABAM2;ENST00000496951.1_1_2:28117423-28152780:+|nuORF;ENSG00000158019|ENST00000379624|BABAM2 5 WS{I|L}M{I|L}S 6 -1 40.214 0.0 0.0 2.0528 0.0 0.0 997.5232088448084 241.09900842838127 1238.6222172731898 0.0 0.0 0.0 0.0 0 0.0 0.0 1.8098943791441968 0.0 WS{I|L}M{I|L}S 2.0528 - 429 + 1 2.319 34677.3 0.7400000095367432 5522 4665 10188 SUDHL4_400M_050219_1,10189 SUDHL4_400M_050219_1,10189, False False MLSPFISSV 57.374064 980.511584460735 842327.5 10188.0 nc|ENSG00000158019|Q9NXR7-4|BABAM2;;nc|ENSG00000158019|Q9NXR7-1|BABAM2;;ENST00000492702.1_1_2:28117423-28117564:+|nuORF;;nc|ENSG00000158019|Q9NXR7-3|BABAM2;;ENST00000496951.1_1_2:28117423-28152780:+|nuORF;;ENSG00000158019|ENST00000379624|BABAM2 8.44143040974935 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10191 57.382 180.0 488110.0 25 0 24445.0 + 11630 GLALLYSGV 9 130 892.5139270063264 891.5066505397264 1 892.5156738162041 MULTI CID FTMS 0 0 0 10190 308177.1875 1.0 0 0.0 1 Unmodified _GLALLYSGV_ ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000236067.8_1_1:44440634-44441766:+|nuORF;ENST00000468183.5_1_1:44440655-44441072:+|nuORF;ENST00000496131.1_1_1:44440655-44442052:+|nuORF 53.57557251787612 0.0325303259649373 5 [Q{I|L}]{I|L}{I|L}YSR 7 4 + 58.544 0.0 0.0 6.5668 6.5668 84.917 0.0 0.0 0.0 2.6211192963361185 9.33053210369387 2.6211192963361185 2.6211192963361185 0 1.0 0.0 0.3807196863200844 0.0 [Q{I|L}]{I|L}{I|L}YSR;[AG]{I|L}{I|L}{I|L}YSR;[Q{I|L}]{I|L}Y{I|L}SR;{[VA]|[{I|L}G]}A{I|L}{I|L}YSR;[Q{I|L}]{I|L}{I|L}SYR;[AG]{I|L}{I|L}Y{I|L}SR;[AG]{I|L}{I|L}{I|L}SYR;{[VA]|[{I|L}G]}A{I|L}Y{I|L}SR;[Q{I|L}]{I|L}YS{I|L}R;{[VA]|[{I|L}G]}A{I|L}{I|L}SYR 6.5668;6.2728;5.8643;5.8514;5.5874;5.5703;5.2934;5.1489;5.1046;4.872 -;-;-;-;-;-;-;-;-;- 865 1 2.319 60597.4 1.0 5523 4666 10190 SUDHL4_400M_050219_1,10191 SUDHL4_400M_050219_1,10191,GLALLYSGV True True GLALLYSGV 57.382183 892.515673816204 914861.0 10190.0 ENSG00000117410|ENST00000472174|ATP6V0B;;ENST00000236067.8_1_1:44440634-44441766:+|nuORF;;ENST00000468183.5_1_1:44440655-44441072:+|nuORF;;ENST00000496131.1_1_1:44440655-44442052:+|nuORF 4.684360027313232 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10192 57.396 800.0 72832.0 25 0 935.94 -1 0 105 1062.2842171038185 0 1062.712329089642 PEAK CID FTMS 0 0 0 10190 36404.3125 1.0 0 0.0 2 5 P 1 -1 6.9897 0.0 0.0 0.32931 0.0 0.0 1800.3893437761928 222.08851038150627 2022.477854157699 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.32931 - 32 + 1 2.319 40979.3 0.7300000190734863 5524 4666 10190 SUDHL4_400M_050219_1,10192 SUDHL4_400M_050219_1,10192, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10195 57.406 214.0 155060.0 25 0 11905.0 -1 0 80 1144.0509640544535 0 1144.071459949017 PEAK CID FTMS 0 0 0 10194 22490.013671875 0.2969859613887122 2 -0.05633544921875 1 5 V 1 -1 5.4846 0.0 0.0 0.23991 0.0 0.0 1297.6324324040263 886.3787325494749 2184.011164953501 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.23991 - 9 + 1 2.319 27384.4 1.0 5525 4668 10194 SUDHL4_400M_050219_1,10195 SUDHL4_400M_050219_1,10195, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10196 57.413 383.0 49733.0 25 0 3379.2 -1 0 56 923.7551757693292 0 923.7551757693292 PEAK CID FTMS 0 0 0 -1 0 2 5 {I|L} 1 -1 3.9794 0.0 0.0 0.21563 0.0 0.0 1222.0934681384642 507.2970369928344 1729.3905051312986 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.21563 - 3 + 1 2.319 20906.1 1.0 5526 4668 10194 SUDHL4_400M_050219_1,10196 SUDHL4_400M_050219_1,10196, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10197 57.427 800.0 42655.0 25 0 2459.1 -1 0 73 949.9504272341728 0 949.9504272341728 PEAK CID FTMS 0 0 0 -1 0 3 5 M 1 -1 3.9794 0.0 0.0 0.20968 0.0 0.0 842.4830555408081 921.3158053033812 1763.7988608441892 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.20968 - 1 + 1 2.319 27885.1 0.4300000071525574 5527 4668 10194 SUDHL4_400M_050219_1,10197 SUDHL4_400M_050219_1,10197, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10199 57.445 800.0 22356.0 25 0 952.39 -1 0 53 937.5739013552666 0 937.5739013552666 PEAK CID FTMS 0 0 0 -1 0 1 5 G 1 -1 3.0989 0.0 0.0 0.16544 0.0 0.0 1162.7558216540892 650.3501070611936 1813.105928715283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.16544 - 3 + 1 2.319 24027.7 0.8999999761581421 5528 4669 10198 SUDHL4_400M_050219_1,10199 SUDHL4_400M_050219_1,10199, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10200 57.456 643.0 114550.0 25 0 18425.0 + 17403 KMPDDVWLV 9 81 551.7836598615925 1101.5527667899848 2 551.7836791872978 MULTI CID FTMS 0 0 0 10198 97300.71875 0.5680985706503975 -5 0.0734100341796875 2 Unmodified _KMPDDVWLV_ ENSG00000110514|ENST00000706887|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6|MADD 34.40172386719151 0.1061884637610825 5 [W{I|L}]DDRGE{I|L}V 9 6 + 65.869 0.0 0.0 5.9796 5.9796 82.26 0.0 0.0 0.0 10.20181229336984 43.93053421393809 10.20181229336984 1.706962271689747 0 0.8807196863200843 1.6989700043360187 0.3494850021680094 0.8494850021680094 [W{I|L}]DDRGE{I|L}V;[W{I|L}]DDRW{I|L}V;[W{I|L}]DDGVW{I|L}V;[W{I|L}]DDGRE{I|L}V;{[RE]|[WV]}[WD]VGE{I|L}V;{[RE]|[WV]}[WD]VW{I|L}V;{[RE]|[WV]}[WD]RE{I|L}V;[W{I|L}]DDRAA[KQ];[W{I|L}]DDGVAA[KQ];[W{I|L}]DDG[Q{I|L}][KQ] 5.9796;5.8247;5.3683;5.3208;4.2774;4.1225;3.3037;1.3461;1.2803;0.68727 -;-;-;-;-;-;-;-;-;- 366 1 2.319 60546.5 1.0 5529 4669 10198 SUDHL4_400M_050219_1,10200 SUDHL4_400M_050219_1,10200,KMPDDVWLV True True KMPDDVWLV 57.456107 551.783679187298 578102.75 10198.0 ENSG00000110514|ENST00000706887|MADD;;nc|ENSG00000110514|Q8WXG6-8|MADD;;nc|ENSG00000110514|Q8WXG6-4|MADD;;nc|ENSG00000110514|Q8WXG6-5|MADD;;nc|ENSG00000110514|Q8WXG6-6|MADD;;nc|ENSG00000110514|Q8WXG6-7|MADD;;nc|ENSG00000110514|Q8WXG6-3|MADD;;nc|ENSG00000110514|Q8WXG6-2|MADD;;nc|ENSG00000110514|Q8WXG6|MADD 5.044225851694743 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10206 57.487 591.0 99741.0 25 0 8443.7 -1 0 105 1104.0182814364848 0 1104.080615222454 PEAK CID FTMS 0 0 0 -1 0 1 5 S 1 -1 4.6041 0.0 0.0 0.20871 0.0 0.0 1132.5023088673072 983.4568575494748 2115.959166416782 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.20871 - 10 + 1 2.319 45452.2 1.0 5530 4674 10205 SUDHL4_400M_050219_1,10206 SUDHL4_400M_050219_1,10206, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10207 57.492 259.0 130610.0 25 0 2936.0 + 36365 SYPVTLAVV 9 83 948.5410624129986 947.5337859463986 1 948.8867065310478 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _SYPVTLAVV_ REV__ENST00000264350.7_1_4:89384727-89385075:+|nuORF 3.944395688203298 0.7769873103969335 5 [NP]T 3 -1 10.458 0.0 0.0 1.1037 0.0 0.0 0.0 632.3682030208704 632.3682030208704 1.5051499783199065 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]T 1.1037 - 13 1 2.319 29079.0 1.0 5531 4674 10205 SUDHL4_400M_050219_1,10207 SUDHL4_400M_050219_1,10207,SYPVTLAVV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10208 57.497 245.0 36944.0 25 0 1665.5 -1 0 31 1042.5906501130582 0 1042.126879870892 PEAK CID FTMS 0 0 0 -1 0 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.319 15282.1 1.0 5532 4674 10205 SUDHL4_400M_050219_1,10208 SUDHL4_400M_050219_1,10208, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10211 57.512 525.0 55506.0 25 0 1427.2 -1 0 76 909.0838500857352 0 909.0838500857352 PEAK CID FTMS 0 0 0 -1 0 1 5 C 1 -1 3.9794 0.0 0.0 0.21911 0.0 0.0 1036.5974964587767 673.5236910455686 1710.1211875043457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.21911 - 4 + 1 2.319 25171.1 1.0 5533 4676 10210 SUDHL4_400M_050219_1,10211 SUDHL4_400M_050219_1,10211, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10212 57.518 319.0 11471.0 25 0 1483.7 -1 0 13 1031.266650378704 0 1031.266650378704 PEAK CID FTMS 0 0 0 -1 0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.319 14775.5 1.0 5534 4676 10210 SUDHL4_400M_050219_1,10212 SUDHL4_400M_050219_1,10212, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10216 57.543 800.0 16097.0 25 0 932.75 -1 0 33 1153.444506824017 0 1153.444506824017 PEAK CID FTMS 0 0 0 -1 0 1 5 Y 1 -1 6.9897 0.0 0.0 0.30326 0.0 0.0 1311.034080931434 827.7627047174436 2138.7967856488776 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.30326 - 4 + 1 2.319 18055.1 0.3499999940395355 5535 4679 10215 SUDHL4_400M_050219_1,10216 SUDHL4_400M_050219_1,10216, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10217 57.55 427.0 29711.0 25 0 2859.5 -1 0 32 1119.6659729998182 0 1119.930712878704 PEAK CID FTMS 0 0 0 10215 19127.12109375 1.0 0 0.0 2 5 W 1 -1 3.9794 0.0 0.0 0.17786 0.0 0.0 874.6899039080366 1173.5371798151002 2048.2270837231367 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.17786 - 1 + 1 2.319 18795.5 1.0 5536 4679 10215 SUDHL4_400M_050219_1,10217 SUDHL4_400M_050219_1,10217, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10222 57.579 800.0 110640.0 25 0 8097.7 + 34408 SLVGPQIYL 9 84 989.5676857745134 988.5604093079132 1 989.5663940310478 MULTI CID FTMS 0 0 0 10221 52123.33203125 0.430330394927202 6 -0.0793495178222656 1 Unmodified _SLVGPQIYL_ nc|ENSG00000174485|Q7Z401|DENND4A;ENST00000568515.1_1_15:66007788-66048788:-|nuORF;ENSG00000174485|ENST00000443035|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A 27.628801355627647 0.1796483985696185 5 [QP]G{I|L}VS{I|L}Y{I|L} 9 6 + 68.848 0.0 0.0 6.9645 6.9645 64.599 0.0 0.0 0.0 10.400217704352457 59.38424994129406 10.400217704352457 0.0 0 0.0 0.0 1.274227503252014 0.3252574989159953 [QP]G{I|L}VS{I|L}Y{I|L};[QP]{I|L}GVS{I|L}Y{I|L};[QP]G{I|L}SV{I|L}Y{I|L};[QP]{I|L}GSV{I|L}Y{I|L};[QP]G{I|L}VTVY{I|L};[QP]{I|L}GVTVY{I|L};[QP]GV{I|L}S{I|L}Y{I|L};[QP]{I|L}RS{I|L}Y{I|L};[QP]{I|L}GVSY{I|L}{I|L};[QP]G{I|L}VSY{I|L}{I|L} 6.9645;6.9645;6.3555;6.3555;6.0522;6.0522;6.0264;5.9802;5.68;5.68 -;-;-;-;-;-;-;-;-;- 615 1 2.319 64485.8 0.9900000095367432 5537 4683 10221 SUDHL4_400M_050219_1,10222 SUDHL4_400M_050219_1,10222,SLVGPQIYL False False SLVGPQIYL 57.578765 989.566394031048 736194.75 10221.0 nc|ENSG00000174485|Q7Z401|DENND4A;;ENST00000568515.1_1_15:66007788-66048788:-|nuORF;;ENSG00000174485|ENST00000443035|DENND4A;;nc|ENSG00000174485|Q7Z401-2|DENND4A 5.145583788553874 1.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10223 57.59 652.0 30572.0 25 0 1617.6 -1 0 54 1147.424975574017 0 1147.424975574017 PEAK CID FTMS 0 0 0 -1 0 2 5 W 1 -1 4.6041 0.0 0.0 0.2008 0.0 0.0 1072.4768299548716 1031.2621554010375 2103.7389853559093 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.2008 - 1 + 1 2.319 21393.9 1.0 5538 4683 10221 SUDHL4_400M_050219_1,10223 SUDHL4_400M_050219_1,10223, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10224 57.604 800.0 23153.0 25 0 1038.7 -1 0 51 1134.668872058392 0 1134.668872058392 PEAK CID FTMS 0 0 0 -1 0 3 5 C(Carbamidomethyl (C)) 1 -1 3.4949 0.0 0.0 0.15414 0.0 0.0 1257.6877674548716 846.5710543268186 2104.25882178169 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.15414 - 1 + 1 2.319 18347.0 0.4399999976158142 5539 4683 10221 SUDHL4_400M_050219_1,10224 SUDHL4_400M_050219_1,10224, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10229 57.632 800.0 39960.0 25 0 6999.8 -1 0 70 1103.251950988349 0 1103.242968738079 PEAK CID FTMS 0 0 0 10228 11642.8857421875 0.9588748308923905 -1 0.0039405822753906 1 5 {I|L} 1 -1 3.9794 0.0 0.0 0.18051 0.0 0.0 1478.1479316624425 610.2343844049436 2088.382316067386 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.18051 - 5 + 1 2.319 27728.6 0.4699999988079071 5540 4687 10228 SUDHL4_400M_050219_1,10229 SUDHL4_400M_050219_1,10229, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10230 57.638 279.0 69395.0 25 0 1787.3 -1 0 61 1125.0449350225915 0 1125.336474597454 PEAK CID FTMS 0 0 0 -1 0 2 5 T 1 -1 1.2591 0.0 0.0 0.056006 0.0 0.0 1113.983716625458 1030.0357149713502 2144.0194315968083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.056006 - 1 + 1 2.319 20107.8 1.0 5541 4687 10228 SUDHL4_400M_050219_1,10230 SUDHL4_400M_050219_1,10230, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10234 57.662 800.0 29192.0 25 0 986.05 -1 0 60 1172.0581057890624 0 1171.783496081829 PEAK CID FTMS 0 0 0 10233 111580.21875 1.0 0 0.0 1 5 S 1 -1 3.9794 0.0 0.0 0.16991 0.0 0.0 1175.5458247599624 1076.4743136041627 2252.020138364125 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.16991 - 10 + 1 2.319 25413.0 0.5699999928474426 5542 4690 10233 SUDHL4_400M_050219_1,10234 SUDHL4_400M_050219_1,10234, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10235 57.672 571.0 96371.0 25 0 4058.6 + 20431 LLIENVASL 9 101 971.5771270356372 970.569850569037 1 971.5764648318292 MULTI CID FTMS 0 0 0 10233 129436.375 0.0382413692117186 61 -0.9995803833007812 2 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 45.69961567697781 0.0497987121815769 5 {I|L}{I|L}{I|L}ENVAS{I|L} 9 0 + 62.034 0.0 0.0 6.3915 6.3915 87.364 0.0 0.0 0.0 5.413004791563893 12.98332479720628 5.413004791563893 5.413004791563893 0 0.2887254899964357 0.8239087409443188 0.0 1.805462187404089 + + {I|L}{I|L}{I|L}ENVAS{I|L};{[NV]|[RG]}E{I|L}{I|L}{I|L}AS{I|L};{I|L}{I|L}{I|L}ENG{I|L}S{I|L};{I|L}{I|L}[DN]{I|L}{I|L}AS{I|L};{I|L}{I|L}{I|L}[DN]{I|L}AS{I|L};{[NV]|[RG]}E{I|L}{I|L}A{I|L}S{I|L};{I|L}{I|L}{I|L}[DN]A{I|L}S{I|L};{I|L}{I|L}[DN]{I|L}A{I|L}S{I|L};{I|L}{I|L}{I|L}ENGS{I|L}{I|L};{[NV]|[RG]}EA{I|L}{I|L}{I|L}S{I|L} 6.3915;5.8338;5.6937;5.548;5.548;5.136;4.8501;4.8501;4.5582;4.5197 +;-;-;-;-;-;-;-;-;- + 632 1 2.319 44239.8 1.0 5543 4690 10233 SUDHL4_400M_050219_1,10235 SUDHL4_400M_050219_1,10235,LLIENVASL True True LLIENVASL 57.671704 971.576464831829 46923037.0 10233.0 nc|ENSG00000233276|P07203-2|GPX1;;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;;ENSG00000233276|ENST00000419783|GPX1;;ENST00000388829.3_1_X:13397321-13397372:-|nuORF 5.075720151265462 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10236 57.686 800.0 210090.0 25 0 31207.0 + + 1548 ALLDKLYAL 9 121 510.310429008043 1018.606305082886 2 510.3106567263603 MULTI CID FTMS 0 0 0 10233 118074.640625 0.1264898608613991 -5 0.0371589660644531 3 Unmodified _ALLATLAAYL_ ENSG00000177971|ENST00000403490|IMP3 74.42276476219924 0.0187941584752634 5 [{I|L}A][TA]{I|L}YA{I|L}A{I|L} 10 -1 + 85.327 0.0 0.0 8.3769 8.3769 91.359 0.0 0.0 0.0 14.498103176992174 16.53212513775344 14.498103176992174 6.020599913279625 0 0.8807196863200843 2.0 1.4124379954164592 0.0 [{I|L}A][TA]{I|L}YA{I|L}A{I|L};[{I|L}A]{I|L}[TA]YA{I|L}A{I|L};[{I|L}A][TA]Y{I|L}A{I|L}A{I|L};[{I|L}A][TA]{I|L}AY{I|L}A{I|L};[{I|L}A][TA]{I|L}A{I|L}YA{I|L};[{I|L}A]{I|L}DKY{I|L}A{I|L};[{I|L}A]{I|L}DK{I|L}YA{I|L};[{I|L}A][TA]YA{I|L}{I|L}A{I|L};[{I|L}A]{I|L}[TA]AY{I|L}A{I|L};[{I|L}A]{I|L}[TA]A{I|L}YA{I|L} 8.3769;7.7858;7.6644;7.6392;7.5498;7.2872;7.1978;7.0996;7.0482;6.9587 -;-;-;-;-;-;-;-;-;- 2429 1 2.319 129300.9 0.4199999868869781 5544 4690 10233 SUDHL4_400M_050219_1,10236 SUDHL4_400M_050219_1,10236,ALLATLAAYL False False ALLDKLYAL 57.685516 510.31065672636 4040706.75 10233.0 ENSG00000177971|ENST00000403490|IMP3 3.987945000330607 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10237 57.69 213.0 81478.0 25 0 4752.4 + -1 FAYEGPMYL 9 49 1090.040576159954 0 1090.040576159954 PEAK CID FTMS 0 0 0 -1 0 4 nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-2|RNF145;ENSG00000145860|ENST00000424310|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145 5 G 1 -1 6.9897 0.0 0.0 0.32091 0.0 0.0 1598.7944569079957 519.2297457330686 2118.024202641064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.32091 - 8 + 1 2.319 22404.6 1.0 5545 4690 10233 SUDHL4_400M_050219_1,10237 SUDHL4_400M_050219_1,10237, False False FAYEGPMYL 57.689591 1090.04057615995 946273.0625 10233.0 nc|ENSG00000145860|Q96MT1-3|RNF145;;nc|ENSG00000145860|Q96MT1-4|RNF145;;nc|ENSG00000145860|Q96MT1-2|RNF145;;ENSG00000145860|ENST00000424310|RNF145;;nc|ENSG00000145860|Q96MT1-5|RNF145 5.787557442982991 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10238 57.695 311.0 90492.0 25 0 1928.4 -1 0 71 1173.270125725979 0 1173.469531238079 PEAK CID FTMS 0 0 0 -1 0 5 5 {I|L} 1 -1 3.0989 0.0 0.0 0.13218 0.0 0.0 1376.3022010595766 852.1055391900999 2228.4077402496764 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.13218 - 3 + 1 2.319 26207.0 1.0 5546 4690 10233 SUDHL4_400M_050219_1,10238 SUDHL4_400M_050219_1,10238, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10240 57.711 714.0 78324.0 25 0 2322.5 -1 0 100 1149.5615307544952 0 1149.222216784954 PEAK CID FTMS 0 0 0 10239 27298.2578125 0.2405839297249591 1 -0.0383491516113281 1 5 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.23876 0.0 0.0 1774.9270033041091 372.1293123834594 2147.0563156875687 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.23876 - 21 + 1 2.319 39737.2 1.0 5547 4691 10239 SUDHL4_400M_050219_1,10240 SUDHL4_400M_050219_1,10240, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10241 57.725 800.0 46009.0 25 0 1266.4 -1 0 94 1141.950773025974 0 1141.948413074017 PEAK CID FTMS 0 0 0 10239 104951.28125 1.0 0 0.0 2 5 P 1 -1 3.0989 0.0 0.0 0.13581 0.0 0.0 1121.6069160697232 1060.2085665338502 2181.8154826035734 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.13581 - 6 + 1 2.319 31100.6 0.4699999988079071 5548 4691 10239 SUDHL4_400M_050219_1,10241 SUDHL4_400M_050219_1,10241, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10242 57.734 478.0 436750.0 25 0 19869.0 -1 0 215 846.0523656222135 0 846.0295898318291 PEAK CID FTMS 0 0 0 -1 0 3 5 {M(Oxidation (M))|F}Y 2 -1 7.0783 0.0 0.0 0.41881 0.0 0.0 1260.8925292407175 116.0512713067992 1376.9438005475167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.41881 - 1259 + 1 2.319 130576.8 1.0 5549 4691 10239 SUDHL4_400M_050219_1,10242 SUDHL4_400M_050219_1,10242, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10244 57.75 800.0 45865.0 25 0 1040.2 -1 0 88 1027.685961902142 0 1027.685961902142 PEAK CID FTMS 0 0 0 -1 0 1 5 A 1 -1 2.4743 0.0 0.0 0.1205 0.0 0.0 1828.245277830848 151.05169092349846 1979.2969687543464 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.1205 - 4 + 1 2.319 33431.3 0.4600000083446502 5550 4692 10243 SUDHL4_400M_050219_1,10244 SUDHL4_400M_050219_1,10244, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10245 57.756 349.0 52299.0 25 0 1626.8 -1 0 51 1116.461840808392 0 1116.461840808392 PEAK CID FTMS 0 0 0 -1 0 2 5 N 1 -1 1.9897 0.0 0.0 0.089188 0.0 0.0 1031.5437244861216 1082.2707003229127 2113.8144248090343 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.089188 - 1 + 1 2.319 21116.7 1.0 5551 4692 10243 SUDHL4_400M_050219_1,10245 SUDHL4_400M_050219_1,10245, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10248 57.77 456.0 82776.0 25 0 1561.3 -1 0 95 786.0927001833916 0 786.0927001833916 PEAK CID FTMS 0 0 0 -1 0 1 5 G 1 -1 3.0989 0.0 0.0 0.19736 0.0 0.0 1288.0361256091674 222.0889834039672 1510.1251090131343 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19736 - 42 + 1 2.296 38627.5 1.0 5552 4694 10247 SUDHL4_400M_050219_1,10248 SUDHL4_400M_050219_1,10248, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10249 57.784 800.0 111480.0 25 0 3502.5 -1 YSVAFCNH 8 146 997.4208566074778 996.4135801408778 1 997.6296874880792 MULTI CID FTMS 0 0 0 -1 0 2 Carbamidomethyl (C) _YSVAFC(Carbamidomethyl (C))NH_ ENSG00000135842|ENST00000367511|NIBAN1 5.230669730166228 0.792582437072536 5 [{I|L}T][DV]{M(Oxidation (M))|F}{I|L} 6 -1 16.137 0.0 0.0 1.6195 0.0 0.0 0.0 305.0109671860528 305.0109671860528 5.299055765108291 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.7887254899964358 0.0 [{I|L}T][DV]{M(Oxidation (M))|F}{I|L} 1.6195 - 931 1 2.296 63936.5 0.8600000143051147 5553 4694 10247 SUDHL4_400M_050219_1,10249 SUDHL4_400M_050219_1,10249,YSVAFCNH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10250 57.798 800.0 618580.0 25 0 24956.0 -1 0 301 830.0283751005761 0 830.0779907107353 PEAK CID FTMS 0 0 0 10247 22938.16796875 0.3051447295889479 1 -0.0409393310546875 3 5 CRS{I|L}GYY 7 -1 30.226 0.0 0.0 1.823 0.0 0.0 696.5975084025209 116.05135523013904 812.64886363266 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5796896906561032 0.0 CRS{I|L}GYY 1.823 - 3199 + 1 2.296 310618.1 0.7099999785423279 5554 4694 10247 SUDHL4_400M_050219_1,10250 SUDHL4_400M_050219_1,10250, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10251 57.801 156.0 135990.0 25 0 5579.5 -1 0 54 1099.5796152282187 0 1099.377978503704 PEAK CID FTMS 0 0 0 10247 114699.2734375 0.6471707962328299 -1 0.0037651062011718 4 5 T 1 -1 3.0989 0.0 0.0 0.14104 0.0 0.0 1183.7879403179625 909.297006475256 2093.0849467932185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.14104 - 4 + 1 2.296 23414.1 1.0 5555 4694 10247 SUDHL4_400M_050219_1,10251 SUDHL4_400M_050219_1,10251, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10253 57.807 209.0 95333.0 25 0 3759.9 -1 0 55 1141.157275378704 0 1141.157275378704 PEAK CID FTMS 0 0 0 -1 0 1 5 G 1 -1 3.0989 0.0 0.0 0.1359 0.0 0.0 1128.4006580798707 1091.8465059869752 2220.247164066846 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.1359 - 3 + 1 2.296 22089.2 1.0 5556 4695 10252 SUDHL4_400M_050219_1,10253 SUDHL4_400M_050219_1,10253, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10254 57.821 800.0 61555.0 25 0 1040.8 -1 0 98 1179.5278490270728 0 1179.296435534954 PEAK CID FTMS 0 0 0 -1 0 2 5 R 1 -1 5.4846 0.0 0.0 0.23269 0.0 0.0 1918.797414507468 279.11057459049067 2197.9079890979583 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.23269 - 25 + 1 2.296 36509.0 0.5400000214576721 5557 4695 10252 SUDHL4_400M_050219_1,10254 SUDHL4_400M_050219_1,10254, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10255 57.828 363.0 96537.0 25 0 2066.9 -1 0 84 1126.5352145444267 0 1126.207690417767 PEAK CID FTMS 0 0 0 -1 0 3 5 R 1 -1 3.0989 0.0 0.0 0.13767 0.0 0.0 1287.8666804542847 804.0505465143186 2091.9172269686032 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.13767 - 5 + 1 2.296 30995.8 1.0 5558 4695 10252 SUDHL4_400M_050219_1,10255 SUDHL4_400M_050219_1,10255, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10256 57.832 217.0 155360.0 25 0 5671.0 -1 0 85 1097.572818840693 0 1097.755419909954 PEAK CID FTMS 0 0 0 -1 0 4 5 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.18145 0.0 0.0 1254.057184456973 788.9650972955686 2043.0222817525407 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.18145 - 3 + 1 2.296 26241.3 1.0 5559 4695 10252 SUDHL4_400M_050219_1,10256 SUDHL4_400M_050219_1,10256, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10258 57.848 800.0 174860.0 25 0 10524.0 -1 FYTMKWFFQCF 11 181 802.8556682323838 0 802.7832519412041 PEAK CID FTMS 0 0 0 10257 57813.68359375 1.0 0 0.0 1 Carbamidomethyl (C) _FYTMKWFFQC(Carbamidomethyl (C))F_ ENSG00000148429|ENST00000609104|USP6NL;nc|ENSG00000148429|Q92738-2|USP6NL 0.3506318815782774 0.47618401536486 5 A 1 -1 5.4846 0.0 0.0 0.34199 0.0 0.0 1397.590519348753 132.04610620670158 1529.6366255554549 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.34199 - 163 + 1 2.296 92160.7 0.8999999761581421 5560 4696 10257 SUDHL4_400M_050219_1,10258 SUDHL4_400M_050219_1,10258,FYTMKWFFQCF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10259 57.856 436.0 274140.0 25 0 2684.3 -1 0 101 897.5268377040042 0 897.4358398318291 PEAK CID FTMS 0 0 0 -1 0 2 5 G 1 -1 5.4846 0.0 0.0 0.30588 0.0 0.0 753.5745971835958 979.413217412756 1732.987814596352 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.30588 - 140 + 1 2.296 78457.0 1.0 5561 4696 10257 SUDHL4_400M_050219_1,10259 SUDHL4_400M_050219_1,10259, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10260 57.858 135.0 827680.0 25 0 35868.0 -1 0 145 966.414646382966 0 966.4725829958916 PEAK CID FTMS 0 0 0 10257 35547.55078125 0.4926259626053116 -1 0.0307159423828125 3 5 E 1 -1 5.4846 0.0 0.0 0.28405 0.0 0.0 1501.6641488676914 297.0852144830688 1798.7493633507602 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.28405 - 57 + 1 2.296 76219.3 1.0 5562 4696 10257 SUDHL4_400M_050219_1,10260 SUDHL4_400M_050219_1,10260, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10261 57.865 340.0 233320.0 25 0 8031.3 -1 0 122 791.7049427024431 0 791.4827148318291 PEAK CID FTMS 0 0 0 -1 0 4 5 GPPPPA 6 -1 18.621 0.0 0.0 1.1775 0.0 0.0 871.0249233914111 191.0836123102172 1062.1085357016284 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GPPPPA 1.1775 - 858 + 1 2.296 59515.7 1.0 5563 4696 10257 SUDHL4_400M_050219_1,10261 SUDHL4_400M_050219_1,10261, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10262 57.871 340.0 320160.0 25 0 16161.0 -1 0 172 839.2072960746015 0 838.9002563357353 PEAK CID FTMS 0 0 0 -1 0 5 5 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 2 -1 7.0783 0.0 0.0 0.42223 0.0 0.0 1247.202573250962 132.0461367242797 1379.2487099752418 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 0.42223 - 278 + 1 2.296 74667.4 1.0 5564 4696 10257 SUDHL4_400M_050219_1,10262 SUDHL4_400M_050219_1,10262, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10263 57.875 219.0 395240.0 25 0 18301.0 -1 0 134 960.3990202238832 0 960.3529540896416 PEAK CID FTMS 0 0 0 -1 0 6 5 VV{I|L}T 4 -1 29.412 0.0 0.0 1.5329 0.0 0.0 1191.3699876139783 312.1204928033813 1503.4904804173598 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1989700043360187 0.0 VV{I|L}T 1.5329 - 493 + 1 2.296 64690.2 1.0 5565 4696 10257 SUDHL4_400M_050219_1,10263 SUDHL4_400M_050219_1,10263, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10265 57.884 325.0 49207.0 25 0 2349.0 -1 0 45 1116.580249011517 0 1116.580249011517 PEAK CID FTMS 0 0 0 -1 0 1 5 A 1 -1 4.6041 0.0 0.0 0.20636 0.0 0.0 1418.5813221423716 738.5241793268186 2157.10550146919 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.20636 - 4 + 1 2.276 22417.9 1.0 5566 4697 10264 SUDHL4_400M_050219_1,10265 SUDHL4_400M_050219_1,10265, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10266 57.887 167.0 82508.0 25 0 4714.3 -1 0 42 1055.7991467387783 0 1055.679125964642 PEAK CID FTMS 0 0 0 10264 69781.25 1.0 0 0.0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.276 20726.0 1.0 5567 4697 10264 SUDHL4_400M_050219_1,10266 SUDHL4_400M_050219_1,10266, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10267 57.901 800.0 21432.0 25 0 924.79 -1 0 46 1189.647998034954 0 1189.647998034954 PEAK CID FTMS 0 0 0 -1 0 3 5 M 1 -1 1.1092 0.0 0.0 0.04666 0.0 0.0 1152.0915760486207 1091.1464327447875 2243.2380087934084 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.04666 - 2 + 1 2.276 18485.5 0.9200000166893004 5568 4697 10264 SUDHL4_400M_050219_1,10267 SUDHL4_400M_050219_1,10267, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10268 57.915 800.0 58501.0 25 0 1724.9 -1 0 110 1113.081225574017 0 1113.081225574017 PEAK CID FTMS 0 0 0 -1 0 4 5 GA 2 -1 7.4743 0.0 0.0 0.33605 0.0 0.0 1942.012566038856 151.0521639459594 2093.064729984816 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GA 0.33605 - 15 + 1 2.276 36173.8 0.9100000262260436 5569 4697 10264 SUDHL4_400M_050219_1,10268 SUDHL4_400M_050219_1,10268, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10270 57.923 298.0 211170.0 25 0 3608.3 -1 0 118 840.6957171480958 5038.130644088975 6 841.5497314333916 MULTI CID FTMS 0 0 0 10269 41542.34375 0.5604547113633257 -1 0.0403938293457031 1 5 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NG 4 -1 18.672 0.0 0.0 0.37062 0.0 0.0 0.0 4629.942783331416 4629.942783331416 8.918227804635315 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NG 0.37062 - 97 1 2.276 46822.4 1.0 5570 4698 10269 SUDHL4_400M_050219_1,10270 SUDHL4_400M_050219_1,10270, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10271 57.93 387.0 126680.0 25 0 5177.9 -1 0 103 980.3303830702891 2937.969319811067 3 980.1649658083916 MULTI CID FTMS 0 0 0 -1 0 2 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.23791 0.0 0.0 2655.836612146808 132.04602991275627 2787.882642059564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.23791 - 167 + 1 2.276 39131.1 1.0 5571 4698 10269 SUDHL4_400M_050219_1,10271 SUDHL4_400M_050219_1,10271, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10272 57.944 800.0 48542.0 25 0 3977.8 + -1 TLRRECLRVFR 11 89 753.4266235232353 0 753.4266235232353 PEAK CID FTMS 0 0 0 -1 0 3 Carbamidomethyl (C) _TLRREC(Carbamidomethyl (C))LRVFR_ REV__nc|ENSG00000164616|Q9UKT6|FBXL21P 1.3295316138638542 0.4761840153648598 5 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.36446 0.0 0.0 982.6595081775268 372.1312044733032 1354.79071265083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.36446 + + 14 + 1 2.276 34188.4 0.6299999952316284 5572 4698 10269 SUDHL4_400M_050219_1,10272 SUDHL4_400M_050219_1,10272,TLRRECLRVFR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10273 57.946 111.0 652400.0 25 0 37841.0 -1 0 139 875.6202184072024 0 875.5549804568291 PEAK CID FTMS 0 0 0 10269 87890.640625 1.0 0 0.0 4 5 A 1 -1 4.6041 0.0 0.0 0.26321 0.0 0.0 1543.119726509914 132.0460604303344 1675.1657869402484 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.26321 - 74 + 1 2.276 49972.7 1.0 5573 4698 10269 SUDHL4_400M_050219_1,10273 SUDHL4_400M_050219_1,10273, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10274 57.952 352.0 162120.0 25 0 10883.0 43004 VVWYFRINYRQ 11 128 772.4118797377283 0 771.9463378787041 PEAK CID FTMS 0 0 0 -1 0 5 Unmodified _VVWYFRINYRQ_ ENSG00000168591|ENST00000538716|TMUB2;ENST00000589184.5_1_17:42266304-42268229:+|nuORF;nc|ENSG00000168591|Q71RG4-2|TMUB2 1.3295316138638542 0.4761840153648598 5 D 1 11 5.6739 0.0 0.0 0.36776 0.0 0.0 1292.7131657481143 132.04599939517814 1424.7591651432924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1694451763165201 0.0 D 0.36776 - 42 + 1 2.276 47508.6 1.0 5574 4698 10269 SUDHL4_400M_050219_1,10274 SUDHL4_400M_050219_1,10274,VVWYFRINYRQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10275 57.966 800.0 41895.0 25 0 977.78 -1 0 86 1190.101733386517 0 1190.101733386517 PEAK CID FTMS 0 0 0 -1 0 6 5 M 1 -1 2.4743 0.0 0.0 0.10404 0.0 0.0 1530.8390736072154 713.2932833307249 2244.13235693794 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.10404 - 5 + 1 2.276 27841.2 0.7300000190734863 5575 4698 10269 SUDHL4_400M_050219_1,10275 SUDHL4_400M_050219_1,10275, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10277 57.974 243.0 109210.0 25 0 13257.0 + 40710 VLGSLGLFTL 10 52 510.310429008043 1018.606305082886 2 510.3101379275322 MULTI CID FTMS 0 0 0 10276 247085.6875 0.2646955694066347 4 -0.1163597106933593 1 Unmodified _VLGSLGLFTL_ REV__ENSG00000181333|ENST00000315765|HEPHL1 15.847184025352805 0.5816416552707754 5 [{I|L}A][TA]{I|L}YA 7 -1 38.728 0.0 0.0 3.8021 0.0 0.0 0.0 312.1957575577485 312.1957575577485 25.62932583326273 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 [{I|L}A][TA]{I|L}YA 3.8021 - 49 1 2.263 28167.9 1.0 5576 4699 10276 SUDHL4_400M_050219_1,10277 SUDHL4_400M_050219_1,10277,VLGSLGLFTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10278 57.988 800.0 124520.0 25 0 1263.8 -1 0 140 814.9325026058855 2441.7756784178564 3 815.1604492068291 MULTI CID FTMS 0 0 0 10276 43920.24609375 1.0 0 0.0 2 5 {[QS]|[NT]}Y 3 -1 9.4155 0.0 0.0 0.3856 0.0 0.0 0.0 2060.598071566547 2060.598071566547 -2.1884881423692946 0.0 -2.1884881423692946 0.0 0 0.0 0.0 0.1549471895720985 0.1923877696554315 {[QS]|[NT]}Y 0.3856 - 923 1 2.263 72274.7 0.3899999856948852 5577 4699 10276 SUDHL4_400M_050219_1,10278 SUDHL4_400M_050219_1,10278, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10279 57.994 329.0 615970.0 25 0 28547.0 -1 0 205 861.9469096492741 0 861.8414794802666 PEAK CID FTMS 0 0 0 -1 0 3 5 S 1 -1 5.4846 0.0 0.0 0.31852 0.0 0.0 1515.773032700112 116.05126367740468 1631.8242963775167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.31852 - 343 + 1 2.263 127728.8 1.0 5578 4699 10276 SUDHL4_400M_050219_1,10279 SUDHL4_400M_050219_1,10279, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10280 57.998 213.0 149040.0 25 0 8513.1 -1 0 87 941.4619964808614 0 941.4594604372978 PEAK CID FTMS 0 0 0 10276 89387.953125 0.968612774168064 -1 0.0510940551757812 4 5 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.24478 0.0 0.0 1140.7501515537165 590.0757540338499 1730.8259055875665 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.24478 - 5 + 1 2.263 24977.1 1.0 5579 4699 10276 SUDHL4_400M_050219_1,10280 SUDHL4_400M_050219_1,10280, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10281 58.012 800.0 50869.0 25 0 4199.3 + -1 VFNWLCCFIKM 11 99 767.3550292849541 0 767.3550292849541 PEAK CID FTMS 0 0 0 -1 0 5 2 Carbamidomethyl (C),Oxidation (M) _VFNWLC(Carbamidomethyl (C))C(Carbamidomethyl (C))FIKM(Oxidation (M))_ REV__ENST00000431677.1_1_X:100673784-100702742:+|nuORF 1.3295316138638542 0.4761840153648598 5 S 1 -1 5.4846 0.0 0.0 0.35784 0.0 0.0 1326.5891193835814 116.0512484186156 1442.640367802197 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.35784 - 9 + 1 2.263 34509.1 0.3600000143051147 5580 4699 10276 SUDHL4_400M_050219_1,10281 SUDHL4_400M_050219_1,10281,VFNWLCCFIKM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10284 58.02 104.0 828060.0 25 0 15734.0 + 11930 GMLDGLVNV 9 101 917.4784290985926 916.4711526319926 1 917.4755737185478 MULTI CID FTMS 0 0 0 10283 184357.984375 0.204862904550425 6 -0.1345939636230468 1 Unmodified _GMLDGLVNV_ nc|ENSG00000077232|Q8IXB1-3|DNAJC10;ENSG00000077232|ENST00000264065|DNAJC10 30.63653989081413 0.1413794767160703 5 {[QS]|[NT]}[NS]G{I|L}VNV 9 4 + 40.229 0.0 0.0 4.3896 4.3896 75.519 0.0 0.0 0.0 0.1682792233757482 14.092568545288064 0.1682792233757482 0.1682792233757482 0 0.4247425010840047 0.0 1.0387254899964358 0.3252574989159953 {[QS]|[NT]}[NS]G{I|L}VNV;[QP]T{M(Oxidation (M))|F}{I|L}VNV;{[QS]|[NT]}[NS]GV{I|L}NV;[QP]T{M(Oxidation (M))|F}V{I|L}NV;{[QS]|[NT]}[NS]VAVNV;{[QS]|[NT]}[NS]VG{I|L}NV;{[QS]|[NT]}[NS]R{I|L}NV;{[QS]|[NT]}[NS]G{I|L}VGGV;[QP]T{M(Oxidation (M))|F}{I|L}VGGV;{[QS]|[NT]}[NS]GV{I|L}GGV 4.3896;4.3712;4.0875;4.0692;4.0611;3.7591;3.7091;3.3848;3.3606;3.0828 -;-;-;-;-;-;-;-;-;- 581 1 2.263 60600.6 1.0 5581 4701 10283 SUDHL4_400M_050219_1,10284 SUDHL4_400M_050219_1,10284,GMLDGLVNV False False GMLDGLVNV 58.020093 917.475573718548 4189189.0 10283.0 nc|ENSG00000077232|Q8IXB1-3|DNAJC10;;ENSG00000077232|ENST00000264065|DNAJC10 5.232975165049235 1.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10285 58.026 351.0 764460.0 25 0 31774.0 -1 0 217 884.4017974815397 0 884.6198608279228 PEAK CID FTMS 0 0 0 10283 59735.51171875 1.0 0 0.0 2 5 QGY{M(Oxidation (M))|F} 4 -1 10.477 0.0 0.0 0.59299 0.0 0.0 1136.5116505277292 132.04598413638908 1268.5576346641185 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QGY{M(Oxidation (M))|F} 0.59299 - 820 + 1 2.263 171961.1 1.0 5582 4701 10283 SUDHL4_400M_050219_1,10285 SUDHL4_400M_050219_1,10285, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10286 58.031 226.0 167760.0 25 0 2893.4 -1 0 97 1036.1393473777343 0 1036.254443347454 PEAK CID FTMS 0 0 0 -1 0 3 5 P 1 -1 5.4846 0.0 0.0 0.26492 0.0 0.0 1001.458185866994 968.7490938776 1970.2072797445933 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.26492 - 1 + 1 2.263 36068.7 1.0 5583 4701 10283 SUDHL4_400M_050219_1,10286 SUDHL4_400M_050219_1,10286, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10288 58.047 800.0 106820.0 25 0 4497.8 -1 0 104 1133.693286120892 0 1133.693286120892 PEAK CID FTMS 0 0 0 -1 0 1 5 Q 1 -1 2.2185 0.0 0.0 0.09793 0.0 0.0 1132.727717287069 1001.5781954401 2134.305912727169 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.09793 - 12 + 1 2.263 54733.2 0.7900000214576721 5584 4702 10287 SUDHL4_400M_050219_1,10288 SUDHL4_400M_050219_1,10288, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10289 58.055 450.0 49354.0 25 0 1215.9 -1 0 58 1161.7773477177814 0 1162.228686511517 PEAK CID FTMS 0 0 0 10287 34243.2890625 0.317701377270535 1 -0.0517539978027343 2 5 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.23625 0.0 0.0 1386.1030830314628 785.3469942682249 2171.450077299688 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.23625 - 5 + 1 2.263 20127.8 1.0 5585 4702 10287 SUDHL4_400M_050219_1,10289 SUDHL4_400M_050219_1,10289, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10290 58.069 800.0 337580.0 25 0 15612.0 -1 0 237 851.6512269684923 0 851.8449584841728 PEAK CID FTMS 0 0 0 -1 0 3 5 AGPY 4 -1 4.6412 0.0 0.0 0.27281 0.0 0.0 1128.0308342086655 182.057916509436 1310.0887507181017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AGPY 0.27281 - 984 + 1 2.263 167829.5 0.4300000071525574 5586 4702 10287 SUDHL4_400M_050219_1,10290 SUDHL4_400M_050219_1,10290, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10291 58.083 800.0 37083.0 25 0 2345.7 -1 0 77 1029.502124011517 0 1029.502124011517 PEAK CID FTMS 0 0 0 -1 0 4 5 W 1 -1 5.4846 0.0 0.0 0.26663 0.0 0.0 841.4038319079967 1026.4760225885375 1867.8798544965343 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.26663 - 8 + 1 2.263 27010.8 0.5099999904632568 5587 4702 10287 SUDHL4_400M_050219_1,10291 SUDHL4_400M_050219_1,10291, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10294 58.095 336.0 38692.0 25 0 2872.5 -1 0 37 1013.753955066204 0 1013.753955066204 PEAK CID FTMS 0 0 0 -1 0 1 5 G 1 -1 3.9794 0.0 0.0 0.19647 0.0 0.0 1188.2126697986205 777.2311495416624 1965.4438193402823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19647 - 2 + 1 2.267 20891.6 1.0 5588 4704 10293 SUDHL4_400M_050219_1,10294 SUDHL4_400M_050219_1,10294, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10295 58.109 800.0 105090.0 25 0 2325.1 -1 0 121 1177.2530485504176 0 1177.174609363079 PEAK CID FTMS 0 0 0 10293 50382.328125 1.0 0 0.0 2 5 A 1 -1 5.4846 0.0 0.0 0.23314 0.0 0.0 1664.7974656537665 613.6420382135374 2278.439503867304 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.23314 - 42 + 1 2.267 52522.7 0.9700000286102296 5589 4704 10293 SUDHL4_400M_050219_1,10295 SUDHL4_400M_050219_1,10295, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10296 58.119 593.0 515360.0 25 0 22058.0 -1 0 249 846.9839584679218 0 846.7889282107353 PEAK CID FTMS 0 0 0 -1 0 3 5 {I|L}T{M(Oxidation (M))|F}Y 4 -1 14.373 0.0 0.0 0.8495 0.0 0.0 1048.6175367801789 116.05108820133046 1164.6686249815093 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 {I|L}T{M(Oxidation (M))|F}Y 0.8495 - 1373 + 1 2.267 192208.4 1.0 5590 4704 10293 SUDHL4_400M_050219_1,10296 SUDHL4_400M_050219_1,10296, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10298 58.132 646.0 413190.0 25 0 19351.0 + -1 FSFCRRWLMKW 11 245 816.8970168523355 0 817.2902709841728 PEAK CID FTMS 0 0 0 -1 0 1 Carbamidomethyl (C),Oxidation (M) _FSFC(Carbamidomethyl (C))RRWLM(Oxidation (M))KW_ REV__ENST00000427130.6_1_8:59535830-59536311:-|nuORF 0.3070304955306653 0.4761840153648598 5 QGY{M(Oxidation (M))|F} 4 -1 15.918 0.0 0.0 0.97547 0.0 0.0 1001.500380284946 132.04621301822502 1133.546593303171 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QGY{M(Oxidation (M))|F} 0.97547 - 693 + 1 2.267 171278.3 1.0 5591 4705 10297 SUDHL4_400M_050219_1,10298 SUDHL4_400M_050219_1,10298,FSFCRRWLMKW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10299 58.141 451.0 172650.0 25 0 2646.4 -1 0 133 1033.814013659954 0 1033.814013659954 PEAK CID FTMS 0 0 0 -1 0 2 5 S 1 -1 3.9794 0.0 0.0 0.19265 0.0 0.0 1378.2768177478397 597.2708834283811 1975.5477011762205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.19265 - 72 + 1 2.267 58083.2 1.0 5592 4705 10297 SUDHL4_400M_050219_1,10299 SUDHL4_400M_050219_1,10299, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10300 58.146 294.0 21340.0 25 0 2515.6 -1 0 19 1097.5597310357855 0 1097.589770495892 PEAK CID FTMS 0 0 0 -1 0 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 16703.5 1.0 5593 4705 10297 SUDHL4_400M_050219_1,10300 SUDHL4_400M_050219_1,10300, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10303 58.166 800.0 66927.0 25 0 2768.7 -1 0 97 944.506469437825 0 944.567919909954 PEAK CID FTMS 0 0 0 -1 0 1 5 W 1 -1 6.9897 0.0 0.0 0.37041 0.0 0.0 1316.7226423895186 381.1785067193969 1697.9011491089154 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.37041 - 63 + 1 2.267 38829.8 0.5400000214576721 5594 4707 10302 SUDHL4_400M_050219_1,10303 SUDHL4_400M_050219_1,10303, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10304 58.18 800.0 126260.0 25 0 1547.7 -1 ERMMWEGWCWW 11 135 828.8323569463278 0 828.7626220583916 PEAK CID FTMS 0 0 0 10302 18624.78125 0.4818881505061098 1 -0.0579185485839843 2 Carbamidomethyl (C) _ERMMWEGWC(Carbamidomethyl (C))WW_ ENST00000563908.1_1_15:72647792-72668286:-|nuORF;ENST00000568777.5_1_15:72647792-72649010:-|nuORF 0.0 0.4761840153648598 5 {I|L}T{I|L}VK 5 -1 17.981 0.0 0.0 1.086 0.0 0.0 846.1476107658992 252.09584322018387 1098.243453986083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}T{I|L}VK 1.086 - 217 + 1 2.267 68928.7 0.5 5595 4707 10302 SUDHL4_400M_050219_1,10304 SUDHL4_400M_050219_1,10304,ERMMWEGWCWW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 10305 58.194 800.0 101430.0 25 0 5917.6 -1 0 150 910.995636137974 0 911.0981323122978 PEAK CID FTMS 0 0 0 10302 15070.6181640625 1.0 0 0.0 3 5 P 1 -1 5.4846 0.0 0.0 0.30135 0.0 0.0 1374.7793754480197 345.1222323053344 1719.901607753354 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.30135 - 152 + 1 2.267 54596.9 0.4699999988079071 5596 4707 10302 SUDHL4_400M_050219_1,10305 SUDHL4_400M_050219_1,10305, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10306 58.208 800.0 149860.0 25 0 1853.3 -1 0 151 762.2010375857353 0 762.2010375857353 PEAK CID FTMS 0 0 0 -1 0 4 5 QPG 3 -1 3.8123 0.0 0.0 0.25041 0.0 0.0 892.1102528064331 345.1229036920532 1237.2331564984863 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QPG 0.25041 - 326 + 1 2.267 91148.9 0.4199999868869781 5597 4707 10302 SUDHL4_400M_050219_1,10306 SUDHL4_400M_050219_1,10306, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10308 58.224 800.0 169160.0 25 0 2375.1 -1 0 138 837.5544492092042 0 837.2313110232353 PEAK CID FTMS 0 0 0 10307 5513.35693359375 0.3917982694102162 1 -0.0393028259277343 1 5 Q 1 -1 3.9794 0.0 0.0 0.23785 0.0 0.0 1042.8160994908708 499.1967309698205 1542.0128304606912 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.23785 - 116 + 1 2.267 91093.3 0.9700000286102296 5598 4708 10307 SUDHL4_400M_050219_1,10308 SUDHL4_400M_050219_1,10308, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10309 58.234 539.0 142800.0 25 0 57255.0 -1 0 75 1144.5245249384368 0 1144.536303699017 PEAK CID FTMS 0 0 0 -1 0 2 5 E 1 -1 6.9897 0.0 0.0 0.30562 0.0 0.0 1303.6396127657424 851.3342989557249 2154.973911721467 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.30562 - 3 + 1 2.267 55610.2 1.0 5599 4708 10307 SUDHL4_400M_050219_1,10309 SUDHL4_400M_050219_1,10309, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10310 58.248 800.0 66358.0 25 0 3370.5 -1 0 101 1018.999743640423 0 1018.999743640423 PEAK CID FTMS 0 0 0 -1 0 3 5 AY{I|L}K 4 -1 17.167 0.0 0.0 0.84318 0.0 0.0 1148.4705433337772 409.2096346490844 1557.6801779828616 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AY{I|L}K 0.84318 - 63 + 1 2.267 40640.7 0.4199999868869781 5600 4708 10307 SUDHL4_400M_050219_1,10310 SUDHL4_400M_050219_1,10310, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10313 58.268 800.0 50042.0 25 0 740.27 -1 0 81 1045.6433124500177 0 1045.833911120892 PEAK CID FTMS 0 0 0 10312 14472.955078125 0.6401913692062905 1 -0.0222854614257812 1 5 N 1 -1 4.6041 0.0 0.0 0.22037 0.0 0.0 771.485281050623 1200.7428682916627 1972.2281493422856 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.22037 - 6 + 1 2.267 30245.9 1.0 5601 4710 10312 SUDHL4_400M_050219_1,10313 SUDHL4_400M_050219_1,10313, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10314 58.274 346.0 164220.0 25 0 7285.8 -1 0 109 916.0746210840512 0 916.5275146365166 PEAK CID FTMS 0 0 0 -1 0 2 5 A 1 -1 5.4846 0.0 0.0 0.29968 0.0 0.0 1624.028821780604 132.04599939517814 1756.074821175782 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.29968 - 48 + 1 2.267 42434.5 1.0 5602 4710 10312 SUDHL4_400M_050219_1,10314 SUDHL4_400M_050219_1,10314, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10317 58.294 800.0 20121.0 25 0 1672.1 -1 LTEMELDRV 9 45 561.279256559066 0 561.2798339724541 PEAK CID FTMS 0 0 0 -1 0 1 Oxidation (M) _LTEM(Oxidation (M))ELDRV_ nc|ENSG00000180071|Q8IVF6-2|ANKRD18A 4.75600775471527 0.3444685223463735 5 P 1 -1 0.088644 0.0 0.0 0.0079108 0.0 0.0 906.412839434735 114.05648981265858 1020.4693292473936 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.0079108 - 1 + 1 2.267 19696.2 0.6200000047683716 5603 4712 10316 SUDHL4_400M_050219_1,10317 SUDHL4_400M_050219_1,10317,LTEMELDRV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_1 10318 58.299 294.0 48651.0 25 0 2766.9 -1 0 45 1053.535715699395 0 1053.317553699017 PEAK CID FTMS 0 0 0 -1 0 2 5 M 1 -1 2.4743 0.0 0.0 0.11754 0.0 0.0 1052.5261910650026 918.4846895807248 1971.010880645728 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.11754 - 1 + 1 2.267 24050.4 1.0 5604 4712 10316 SUDHL4_400M_050219_1,10318 SUDHL4_400M_050219_1,10318, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10320 58.307 300.0 224880.0 25 0 12510.0 -1 0 130 884.7772577150165 0 884.7762328982353 PEAK CID FTMS 0 0 0 10319 9006.5810546875 0.0844505236868125 1 -0.0252952575683593 1 5 A 1 -1 6.9897 0.0 0.0 0.39545 0.0 0.0 1561.4336372788623 132.04584680728752 1693.47948408615 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.39545 - 58 + 1 2.267 48943.6 1.0 5605 4713 10319 SUDHL4_400M_050219_1,10320 SUDHL4_400M_050219_1,10320, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10321 58.311 172.0 524840.0 25 0 48368.0 + 37906 TLWVDPYEV 9 79 1121.551118899386 1120.543842432786 1 1123.557177722454 MULTI CID FTMS 0 0 0 10319 543980.3125 0.5413680088443228 4 -0.0636634826660156 2 Unmodified _TLWVDPYEV_ ENSG00000133639|ENST00000256015|BTG1;ENSG00000159388|ENST00000290551|BTG2 74.92900055777586 0.0191935851694334 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VDV[VG]EP 10 6 + 58.817 0.0 0.0 5.249 5.249 79.743 0.0 0.0 0.0 4.167884802175209 7.269987279362624 4.167884802175209 1.3943672335272126 0 1.2764209843288905 1.5228787452803376 1.0189301784845295 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VDV[VG]EP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{M(Oxidation (M))|F}VV[VG]EP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VDV{[MG]|[TS]}PP;[{I|L}T]WVDVYEP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{M(Oxidation (M))|F}VV{[MG]|[TS]}PP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VDV{[DA]|[EG]}VP;[{I|L}T][YE]DVREP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{M(Oxidation (M))|F}VV{[DA]|[EG]}VP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VD{[WT]|[RM]}PP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVKPYEP 5.249;5.1245;4.9803;4.877;4.8559;4.6252;4.5707;4.5008;4.4885;4.4689 -;-;-;-;-;-;-;-;-;- 1252 1 2.267 63139.4 1.0 5606 4713 10319 SUDHL4_400M_050219_1,10321 SUDHL4_400M_050219_1,10321,TLWVDPYEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10322 58.325 800.0 124430.0 25 0 6848.8 -1 0 167 890.4194629223202 0 890.6342040896416 PEAK CID FTMS 0 0 0 -1 0 3 5 Y{M(Oxidation (M))|F} 2 -1 8.5835 0.0 0.0 0.48254 0.0 0.0 1333.6263576299934 132.04596887760002 1465.6723265075934 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 0.48254 - 77 + 1 2.267 68101.4 0.8999999761581421 5607 4713 10319 SUDHL4_400M_050219_1,10322 SUDHL4_400M_050219_1,10322, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10325 58.345 800.0 38722.0 25 0 878.76 -1 0 83 1175.923266589642 0 1175.923266589642 PEAK CID FTMS 0 0 0 -1 0 1 5 C 1 -1 3.0989 0.0 0.0 0.13188 0.0 0.0 1577.2787708728404 666.5324190729124 2243.8111899457526 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.13188 - 14 + 1 2.267 25642.8 0.3799999952316284 5608 4715 10324 SUDHL4_400M_050219_1,10325 SUDHL4_400M_050219_1,10325, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10326 58.359 800.0 46368.0 25 0 1412.1 -1 0 83 981.523974597454 0 981.523974597454 PEAK CID FTMS 0 0 0 -1 0 2 5 N 1 -1 3.0989 0.0 0.0 0.15803 0.0 0.0 1386.7556995837767 457.2083834283813 1843.964083012158 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.15803 - 8 + 1 2.267 31626.4 0.3799999952316284 5609 4715 10324 SUDHL4_400M_050219_1,10326 SUDHL4_400M_050219_1,10326, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10331 58.381 438.0 79001.0 25 0 5381.1 -1 0 91 866.3560668826103 0 866.3560668826103 PEAK CID FTMS 0 0 0 -1 0 1 5 A 1 -1 3.0989 0.0 0.0 0.17906 0.0 0.0 1524.5914997546752 132.0458925836547 1656.6373923383298 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.17906 - 10 + 1 2.267 29797.0 1.0 5610 4719 10330 SUDHL4_400M_050219_1,10331 SUDHL4_400M_050219_1,10331, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10336 58.398 111.0 42706.0 25 0 5226.2 -1 0 16 1020.9508298667828 0 1021.192675769329 PEAK CID FTMS 0 0 0 10335 144358.4375 1.0 0 0.0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 12781.2 1.0 5611 4723 10335 SUDHL4_400M_050219_1,10336 SUDHL4_400M_050219_1,10336, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10337 58.399 64.0 93572.0 25 0 8482.4 -1 0 18 1058.1695061217663 0 1058.228320300579 PEAK CID FTMS 0 0 0 10335 78633.390625 1.0 0 0.0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 15990.3 1.0 5612 4723 10335 SUDHL4_400M_050219_1,10337 SUDHL4_400M_050219_1,10337, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10339 58.412 558.0 53671.0 25 0 1348.0 -1 0 82 937.7434038682828 0 938.067431628704 PEAK CID FTMS 0 0 0 10338 7547.38818359375 0.0571391783507158 1 -0.0262107849121093 1 5 T 1 -1 4.6041 0.0 0.0 0.24575 0.0 0.0 1416.2150049027778 353.1841219537719 1769.3991268565496 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.24575 - 4 + 1 2.267 29994.2 1.0 5613 4724 10338 SUDHL4_400M_050219_1,10339 SUDHL4_400M_050219_1,10339, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10340 58.425 800.0 271170.0 25 0 11244.0 -1 0 132 872.1670785880718 3484.639208485887 4 872.6679565310478 MULTI CID FTMS 0 0 0 10338 76699.8046875 0.1616984487542619 -22 0.3688392639160156 2 5 {I|L}H{I|L}Q 4 -1 37.735 0.0 0.0 1.0829 0.0 0.0 290.1130608431702 2700.222276439691 2990.335337282861 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.579689690656103 {I|L}H{I|L}Q 1.0829 - 809 + 1 2.267 138560.1 0.5199999809265137 5614 4724 10338 SUDHL4_400M_050219_1,10340 SUDHL4_400M_050219_1,10340, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10349 58.47 800.0 65914.0 25 0 10887.0 -1 0 64 1067.9551842628462 0 1067.954028308392 PEAK CID FTMS 0 0 0 10348 35817.90234375 0.2749530704189301 1 -0.0164031982421875 1 5 RYA{M(Oxidation (M))|F}T 5 -1 34.851 0.0 0.0 1.6332 0.0 0.0 1269.4935319338083 223.0730990045532 1492.5666309383616 0.0 0.0 0.0 0.0 0 0.0 0.0 1.555462187404089 0.0 RYA{M(Oxidation (M))|F}T 1.6332 - 238 + 1 2.267 41703.0 0.6800000071525574 5615 4732 10348 SUDHL4_400M_050219_1,10349 SUDHL4_400M_050219_1,10349, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10352 58.49 800.0 113470.0 25 0 6308.7 + 34357 SLSVSVRDA 9 118 933.502980843976 932.495704377376 1 933.5037109255792 MULTI CID FTMS 0 0 0 10351 91775.1328125 0.3215289122150045 11 -0.0930747985839843 1 Unmodified _SLSVSVRDA_ ENSG00000112379|ENST00000251691|ARFGEF3 29.081581746732265 0.1611639662936252 5 {[WT]|[RM]}VS{I|L}WAA 8 6 + 61.953 0.0 0.0 6.6438 6.6438 82.955 0.0 0.0 0.0 0.8464632718486556 16.40978057358332 0.8464632718486556 0.8464632718486556 0 0.6382104921644451 0.0 2.4247425010840047 0.0 {[WT]|[RM]}VS{I|L}WAA;{[TV]|[{I|L}S]}VSS{I|L}WAA;{[TV]|[{I|L}S]}SVS{I|L}WAA;[{I|L}T][TA]S{I|L}WAA;{[WT]|[RM]}SV{I|L}WAA;{[TV]|[{I|L}S]}SSV{I|L}WAA;[PS]A{I|L}S{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A;[{I|L}T][PG]S{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A;{[WT]|[RM]}VW{[TV]|[{I|L}S]}AA;{[TV]|[{I|L}S]}VSW{[TV]|[{I|L}S]}AA 6.6438;6.553;6.504;6.3152;5.7819;5.6421;4.0279;4.0277;3.6587;3.568 -;-;-;-;-;-;-;-;-;- 1219 1 2.267 64022.9 0.8700000047683716 5616 4734 10351 SUDHL4_400M_050219_1,10352 SUDHL4_400M_050219_1,10352,SLSVSVRDA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10353 58.504 800.0 49751.0 25 0 3708.4 -1 0 48 1162.552831268561 3484.6366644058835 3 1163.556323230267 MULTI CID FTMS 0 0 0 10351 67354.1640625 0.6676974620964085 -6 0.0363388061523437 2 5 {I|L}DD 3 -1 10.458 0.0 0.0 0.30011 0.0 0.0 3123.403227168356 0.0 3123.403227168356 0.0 0.9936247538460936 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DD 0.30011 - 17 1 2.267 36841.8 0.3199999928474426 5617 4734 10351 SUDHL4_400M_050219_1,10353 SUDHL4_400M_050219_1,10353, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10357 58.528 800.0 29301.0 25 0 3696.9 + 40907 VLSDIIQNL 9 50 507.79504257111785 0 507.7948486208916 PEAK CID FTMS 0 0 0 10356 56768.05859375 0.2486790731191225 1 -0.0164146423339843 1 Unmodified _VLSDIIQNL_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 23.1484247019978 0.1725298825155634 5 {I|L}VS 3 8 13.188 0.0 0.0 1.3011 0.0 0.0 486.2781211756357 225.0886324518188 711.3667536274545 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VS 1.3011 - 21 + 1 2.267 26933.0 0.6399999856948853 5618 4737 10356 SUDHL4_400M_050219_1,10357 SUDHL4_400M_050219_1,10357,VLSDIIQNL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10361 58.551 671.0 171920.0 25 0 34284.0 + 26017 NLYPETFAL 9 84 1067.54110400907 1066.53382754247 1 1067.539721667767 MULTI CID FTMS 0 0 0 10360 198198.328125 0.4895743799391377 -4 0.0284347534179687 1 Unmodified _NLYPETFAL_ ENSG00000118816|ENST00000237654|CCNI;nc|ENSG00000118816|Q14094-2|CCNI 99.79894945604345 0.0109923542231827 5 [EP]T{M(Oxidation (M))|F}A{I|L}NY{I|L} 9 6 + 73.937 0.0 0.0 6.9324 6.9324 88.508 0.0 0.0 0.0 4.149605070435456 23.635694132186643 4.149605070435456 4.98718628365981 0 0.0 0.0 1.885151878060192 0.8252574989159953 [EP]T{M(Oxidation (M))|F}A{I|L}NY{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YPET{M(Oxidation (M))|F}A{I|L};[EP]T{M(Oxidation (M))|F}AAT{M(Oxidation (M))|F}A{I|L};[EP]T{M(Oxidation (M))|F}A{I|L}YN{I|L};[EP]T{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}A{I|L};[EP]T{M(Oxidation (M))|F}AY{I|L}N{I|L};[EP]T{M(Oxidation (M))|F}AY[VG]A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YMVP{M(Oxidation (M))|F}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YP[DV]YA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}[NG]RA{I|L} 6.9324;6.4648;6.3687;6.2281;5.9267;5.73;5.5537;5.514;5.3675;5.3334 -;+;-;-;-;-;-;-;-;- + 4023 1 2.267 82148.7 1.0 5619 4740 10360 SUDHL4_400M_050219_1,10361 SUDHL4_400M_050219_1,10361,NLYPETFAL True True NLYPETFAL 58.550723 1067.53972166777 1742212.0 10360.0 ENSG00000118816|ENST00000237654|CCNI;;nc|ENSG00000118816|Q14094-2|CCNI 4.707783857981364 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10367 58.583 800.0 24506.0 25 0 1986.9 + 14429 IFPRGRFQ 8 55 510.79002957005247 1019.565506206905 2 510.7898742556572 MULTI CID FTMS 0 0 0 10366 12604.591796875 0.1104900421925324 -2 0.0079879760742187 1 Unmodified _IFPRGRFQ_ REV__ENSG00000104974|ENST00000251372|LILRA1;REV__ENST00000495417.5_1_19:55105185-55110756:+|nuORF 5.760428011301431 0.7893668129297577 5 {I|L} 1 -1 11.42 0.0 0.0 1.1201 0.0 0.0 888.4705030104191 0.0 888.4705030104191 0.0 4.430283238465815 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1201 + + 20 + 1 2.267 20088.5 0.6100000143051147 5620 4745 10366 SUDHL4_400M_050219_1,10367 SUDHL4_400M_050219_1,10367,IFPRGRFQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10370 58.596 365.0 106240.0 25 0 4619.2 -1 0 76 981.6107148888256 0 981.6858398318292 PEAK CID FTMS 0 0 0 10369 118475.2734375 1.0 0 0.0 1 5 {I|L} 1 -1 5.4846 0.0 0.0 0.27965 0.0 0.0 1273.8457451079262 571.2506807916624 1845.096425899589 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.27965 - 22 + 1 2.267 32493.3 1.0 5621 4747 10369 SUDHL4_400M_050219_1,10370 SUDHL4_400M_050219_1,10370, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10371 58.599 179.0 34276.0 25 0 2478.9 -1 0 21 956.9743520951048 0 956.5473510622978 PEAK CID FTMS 0 0 0 10369 55192.39453125 1.0 0 0.0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 16559.6 1.0 5622 4747 10369 SUDHL4_400M_050219_1,10371 SUDHL4_400M_050219_1,10371, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10372 58.606 394.0 21824.0 25 0 3539.1 + -1 CRQRWSDEMWE 11 23 799.8272582888603 0 799.8272582888603 PEAK CID FTMS 0 0 0 -1 0 3 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))RQRWSDEM(Oxidation (M))WE_ REV__ENST00000601390.1_1_19:39926180-39926535:-|nuORF 0.0 0.4761840153648598 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 14086.8 1.0 5623 4747 10369 SUDHL4_400M_050219_1,10372 SUDHL4_400M_050219_1,10372,CRQRWSDEMWE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_1 10373 58.62 800.0 12977.0 25 0 1972.0 -1 0 32 758.6673461794853 0 758.6673461794853 PEAK CID FTMS 0 0 0 -1 0 4 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 16877.2 0.449999988079071 5624 4747 10369 SUDHL4_400M_050219_1,10373 SUDHL4_400M_050219_1,10373, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10375 58.637 800.0 56614.0 25 0 6262.8 -1 0 99 911.2262451052666 0 911.2262451052666 PEAK CID FTMS 0 0 0 -1 0 1 5 MN 2 -1 7.9588 0.0 0.0 0.43719 0.0 0.0 1252.168114134558 320.1621492975219 1572.3302634320798 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MN 0.43719 - 60 + 1 2.267 36272.7 0.4099999964237213 5625 4748 10374 SUDHL4_400M_050219_1,10375 SUDHL4_400M_050219_1,10375, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10380 58.665 800.0 10346.0 25 0 1049.0 -1 0 26 979.7066528201104 0 979.7066528201104 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 17118.3 0.3600000143051147 5626 4752 10379 SUDHL4_400M_050219_1,10380 SUDHL4_400M_050219_1,10380, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10381 58.676 637.0 14775.0 25 0 5690.8 -1 0 17 1036.517993152142 0 1036.517993152142 PEAK CID FTMS 0 0 0 -1 0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 15304.5 1.0 5627 4752 10379 SUDHL4_400M_050219_1,10381 SUDHL4_400M_050219_1,10381, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10383 58.693 800.0 229940.0 25 0 11302.0 -1 0 130 872.1670785880718 3484.639208485887 4 872.6667968630791 MULTI CID FTMS 0 0 0 10382 65901.34375 0.1389331445968211 6 -0.0852203369140625 1 5 [H{I|L}]VEA{I|L}Y{I|L}V 9 -1 36.393 0.0 0.0 1.0444 0.0 0.0 0.0 2444.019310374812 2444.019310374812 7.963884619525537 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 [H{I|L}]VEA{I|L}Y{I|L}V 1.0444 - 403 1 2.267 122485.0 0.3000000119209289 5628 4753 10382 SUDHL4_400M_050219_1,10383 SUDHL4_400M_050219_1,10383, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10387 58.714 603.0 201160.0 25 0 34417.0 + 37907 TLWVDPYEV 9 91 1121.551118899386 1120.543842432786 1 1121.554248034954 MULTI CID FTMS 0 0 0 10386 167415.25 0.0378658348401575 47 -0.3411216735839844 1 Unmodified _TLWVDPYEV_ ENSG00000133639|ENST00000256015|BTG1;ENSG00000159388|ENST00000290551|BTG2 99.79894945604345 0.0109923542231827 5 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DV[PG]EV 10 4 + 82.012 0.0 0.0 7.319 7.319 87.672 0.0 0.0 0.0 12.582334120883374 31.14848121939808 12.582334120883374 3.4948500216800937 0 1.6307196863200843 1.6989700043360187 1.9049471895720984 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DV[PG]EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DV[VS]PV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DV{[DA]|[EG]}PV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DV{M(Oxidation (M))|F}V[PG]EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DV[PS]VV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DV{M(Oxidation (M))|F}V{[DA]|[EG]}PV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DV{M(Oxidation (M))|F}V[VS]PV;[YE][{I|L}T]DVWPV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DV{M(Oxidation (M))|F}V[PS]VV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[KP]PYEV 7.319;7.0071;7.0071;6.603;6.5813;6.2911;6.2911;6.044;5.8653;5.8555 -;-;-;-;-;-;-;-;-;- 2031 1 2.267 79475.6 1.0 5629 4756 10386 SUDHL4_400M_050219_1,10387 SUDHL4_400M_050219_1,10387,TLWVDPYEV True True TLWVDPYEV 58.71392 1121.55424803495 30865268.0 10386.0 ENSG00000159388|ENST00000290551|BTG2;;ENSG00000133639|ENST00000256015|BTG1 8.819990158081055 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10388 58.728 800.0 14688.0 25 0 3167.3 -1 0 25 1036.934985339642 0 1036.934985339642 PEAK CID FTMS 0 0 0 -1 0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 18528.0 0.3700000047683716 5630 4756 10386 SUDHL4_400M_050219_1,10388 SUDHL4_400M_050219_1,10388, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10389 58.741 774.0 21023.0 25 0 5005.0 -1 0 35 1089.617968738079 0 1089.617968738079 PEAK CID FTMS 0 0 0 -1 0 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.267 19798.2 1.0 5631 4756 10386 SUDHL4_400M_050219_1,10389 SUDHL4_400M_050219_1,10389, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10392 58.762 800.0 33681.0 25 0 1685.4 -1 0 74 985.1059416455668 0 985.4235107302666 PEAK CID FTMS 0 0 0 -1 0 1 5 R 1 -1 5.4846 0.0 0.0 0.27866 0.0 0.0 1031.0725877815646 777.9795015924436 1809.052089374008 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.27866 - 5 + 1 2.267 25892.3 0.3199999928474426 5632 4758 10391 SUDHL4_400M_050219_1,10392 SUDHL4_400M_050219_1,10392, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10396 58.786 800.0 21085.0 25 0 2043.1 + 40905 VLSDIIQNL 9 48 507.79512063938415 1013.5756883455684 2 507.7952453494072 MULTI CID FTMS 0 0 0 10395 67677.34375 0.1003325555080739 14 -0.0962600708007812 1 Unmodified _VLSDIIQNL_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 23.1484247019978 0.2366544122328345 5 {NN|[MP]|[D{I|L}]|[EV]}SV{I|L} 5 6 20.7 0.0 0.0 2.0423 0.0 0.0 0.0 483.2555338868371 483.2555338868371 8.710149894766701 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}SV{I|L} 2.0423 - 30 1 2.267 19806.8 0.3400000035762787 5633 4761 10395 SUDHL4_400M_050219_1,10396 SUDHL4_400M_050219_1,10396,VLSDIIQNL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10397 58.8 800.0 102510.0 25 0 5313.1 -1 0 139 887.126191117037 0 886.7975952029228 PEAK CID FTMS 0 0 0 -1 0 2 5 Q 1 -1 6.9897 0.0 0.0 0.3944 0.0 0.0 881.9363289120053 759.2218813624241 1641.1582102744294 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.3944 - 162 + 1 2.267 57160.6 0.2899999916553497 5634 4761 10395 SUDHL4_400M_050219_1,10397 SUDHL4_400M_050219_1,10397, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10398 58.814 800.0 17240.0 25 0 2341.5 + -1 VAVPASLLGM 10 36 957.4351684451104 0 957.4351684451104 PEAK CID FTMS 0 0 0 -1 0 3 ENSG00000011426|ENST00000265748|ANLN;nc|ENSG00000011426|Q9NQW6-2|ANLN 5 VAV{I|L}{I|L} 5 -1 24.949 0.0 0.0 1.3043 0.0 0.0 1162.3943714587767 252.10071741275627 1414.495088871533 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VAV{I|L}{I|L} 1.3043 - 71 + 1 2.267 21035.4 0.9200000166893004 5635 4761 10395 SUDHL4_400M_050219_1,10398 SUDHL4_400M_050219_1,10398, False False VAVPASLLGM 58.813705 957.43516844511 714920.875 10395.0 ENSG00000011426|ENST00000265748|ANLN;;nc|ENSG00000011426|Q9NQW6-2|ANLN 1.2055880029996235 1.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10414 58.881 463.0 570590.0 25 0 26117.0 + 37427 TLDDLIAAV 9 151 930.5139564489724 929.5066799823724 1 930.5128051638604 MULTI CID FTMS 0 0 0 10413 22878.806640625 0.019926260403887 -1 0.0040626525878906 1 Unmodified _TLDDLIAAV_ ENSG00000131503|ENST00000360839|ANKHD1;ENST00000462121.1_1_5:139876268-139877642:+|nuORF;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1 85.35673624503755 0.0162188719545379 5 [{I|L}T]DD{I|L}{I|L}AAV 9 0 + 90.374 0.0 0.0 9.7228 9.7228 90.298 0.0 0.0 0.0 9.204841662593097 14.973024840566469 9.204841662593097 3.762874945799752 0 0.6549471895720984 1.6989700043360187 2.602233848243375 0.0 + + [{I|L}T]DD{I|L}{I|L}AAV;[{I|L}T]DD{I|L}A{I|L}AV;[{I|L}T]D{I|L}D{I|L}AAV;{NN|[MP]|[D{I|L}]|[EV]}DT{I|L}{I|L}AAV;[{I|L}T]DVE{I|L}AAV;[{I|L}T]{I|L}DD{I|L}AAV;[{I|L}T]D{I|L}DA{I|L}AV;{NN|[MP]|[D{I|L}]|[EV]}DT{I|L}A{I|L}AV;{[QN]|[E{I|L}]|[KN]}SD{I|L}{I|L}AAV;{NN|[MP]|[D{I|L}]|[EV]}D{I|L}T{I|L}AAV 9.7228;9.3179;8.7573;8.7325;8.6618;8.4916;8.3524;8.3276;8.3043;8.294 +;-;-;-;-;-;-;-;-;- + 8103 1 2.267 166640.8 1.0 5636 4776 10413 SUDHL4_400M_050219_1,10414 SUDHL4_400M_050219_1,10414,TLDDLIAAV True True TLDDLIAAV 58.880755 930.51280516386 890245.5 10413.0 ENST00000462121.1_1_5:139876268-139877642:+|nuORF;;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;;ENSG00000131503|ENST00000360839|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1 5.640235424041748 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10417 58.9 678.0 85684.0 25 0 1006.3 -1 MMFWFVYEMHM 11 77 808.3101684451103 0 808.3101684451103 PEAK CID FTMS 0 0 0 -1 0 1 4 Oxidation (M) _M(Oxidation (M))M(Oxidation (M))FWFVYEM(Oxidation (M))HM(Oxidation (M))_ ENST00000378669.5_1_2:42578170-42578233:-|nuORF 0.0 0.4761840153648598 5 {M(Oxidation (M))|F}YG 3 -1 10.177 0.0 0.0 0.63033 0.0 0.0 1022.3869862048706 222.0887697809204 1244.475755985791 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}YG 0.63033 - 56 + 1 2.282 44817.3 1.0 5637 4778 10416 SUDHL4_400M_050219_1,10417 SUDHL4_400M_050219_1,10417,MMFWFVYEMHM False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_1 10429 58.957 800.0 20659.0 25 0 757.33 -1 0 50 955.0577270388604 0 955.0577270388604 PEAK CID FTMS 0 0 0 -1 0 1 5 C(Carbamidomethyl (C)) 1 -1 1.2591 0.0 0.0 0.065985 0.0 0.0 1232.462303587683 512.5700167291624 1745.0323203168457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.065985 - 2 + 1 2.282 20920.3 0.3300000131130218 5638 4789 10428 SUDHL4_400M_050219_1,10429 SUDHL4_400M_050219_1,10429, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10434 58.98 397.0 160470.0 25 0 13719.0 + 40906 VLSDIIQNL 9 99 1014.5828132671488 1013.5755368005488 1 1014.58360594511 MULTI CID FTMS 0 0 0 10433 62925.1171875 0.012450485976139 46 -0.3227119445800781 1 Unmodified _VLSDIIQNL_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 74.92900055777586 0.0191935851694334 5 [{I|L}V]ESV{I|L}QN{I|L} 9 3 + 59.338 0.0 0.0 5.8543 5.8543 87.478 0.0 0.0 0.0 3.556518697048716 26.408103009885764 3.556518697048716 7.865320089195592 0 1.2302046884880935 0.0 0.6747425010840047 0.4247425010840047 [{I|L}V]ESV{I|L}QN{I|L};[{I|L}V]ESVQ{I|L}N{I|L};[{I|L}V]ESV{I|L}QGG{I|L};[{I|L}V]ESV{I|L}[AG]N{I|L};[{I|L}V]ES{I|L}VQN{I|L};[Q{I|L}]D{I|L}SV{I|L}N{I|L};[{I|L}V]ESV[AG]{I|L}N{I|L};[{I|L}V]ESVQ{I|L}GG{I|L};[{I|L}V]ES{I|L}N{I|L}N{I|L};[{I|L}V]ES{I|L}VQGG{I|L} 5.8543;5.0783;4.9458;4.9458;4.6871;4.3379;4.1698;4.1698;3.9111;3.7786 -;-;-;-;-;-;-;-;-;- 1417 1 2.282 50988.4 1.0 5639 4793 10433 SUDHL4_400M_050219_1,10434 SUDHL4_400M_050219_1,10434,VLSDIIQNL True True VLSDIIQNL 58.980021 1014.58360594511 5347136.5 10433.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 5.73871390024821 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10437 59.0 800.0 111620.0 25 0 27257.0 + 14829 ILFPGGSVDL 10 65 1017.55955910585 1016.55228263925 1 1017.559497058392 MULTI CID FTMS 0 0 0 10436 69319.125 0.339296301258978 18 -0.1393585205078125 1 Unmodified _ILFPGGSVDL_ ENSG00000137563|ENST00000260118|GGH;ENST00000518966.5_1_8:63939670-63951327:-|nuORF;ENST00000520609.5_1_8:63936629-63951327:-|nuORF 54.773552608820026 0.052133998764723 5 VD{M(Oxidation (M))|F}{I|L}{I|L}{I|L} 6 8 35.648 0.0 0.0 3.5068 0.0 0.0 298.1276112287125 0.0 298.1276112287125 0.0 15.885540741363188 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 VD{M(Oxidation (M))|F}{I|L}{I|L}{I|L} 3.5068 - 117 1 2.282 62802.9 0.3600000143051147 5640 4795 10436 SUDHL4_400M_050219_1,10437 SUDHL4_400M_050219_1,10437,ILFPGGSVDL True True ILFPGGSVDL 59.000489 1017.55949705839 1009951.5 10436.0 ENST00000518966.5_1_8:63939670-63951327:-|nuORF;;ENST00000520609.5_1_8:63936629-63951327:-|nuORF;;ENSG00000137563|ENST00000260118|GGH 5.865437825520833 1.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10438 59.014 800.0 92480.0 25 0 18003.0 + 25701 NIFPYPVGV 9 54 1005.5392577284836 1004.5319812618836 1 1005.536486804485 MULTI CID FTMS 0 0 0 10436 104396.4609375 0.6498756492921945 18 -0.1393585205078125 2 Unmodified _NIFPYPVGV_ ENSG00000139218|ENST00000369367|SCAF11;nc|ENSG00000139218|Q99590-2|SCAF11 60.38955033654506 0.025866396858536 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PY[VP][VG] 9 0 + 56.985 0.0 0.0 5.6728 5.6728 90.831 0.0 0.0 0.0 16.817496819840656 6.227496652734246 6.227496652734246 12.786596949921218 0 1.924742501084005 1.3010299956639813 0.0 0.7614393726401688 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PY[VP][VG];{[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}Y[VP][VG];{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[QT]{[QV]|[N{I|L}]|[RA]|[KV]}R;[VP]Q{M(Oxidation (M))|F}Y[VP][VG];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PVR{[MS]|[{M(Oxidation (M))|F}A]}R;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PV{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}R;[VP]GA{M(Oxidation (M))|F}Y[VP][VG];{[QV]|[N{I|L}]|[RA]|[KV]}[QT]R{[MS]|[{M(Oxidation (M))|F}A]}R;{[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}AR{[MS]|[{M(Oxidation (M))|F}A]}R;{[QV]|[N{I|L}]|[RA]|[KV]}PY{M(Oxidation (M))|F}[VP][VG] 5.6728;4.3999;4.0109;3.9986;3.9213;3.8248;3.6706;3.5303;3.4793;3.4355 +;-;-;-;-;-;-;-;-;- + 405 1 2.282 58704.8 0.3899999856948852 5641 4795 10436 SUDHL4_400M_050219_1,10438 SUDHL4_400M_050219_1,10438,NIFPYPVGV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10447 59.055 607.0 145630.0 25 0 84789.0 -1 0 24 730.5032059387373 729.4959294721373 1 730.5035278201103 MULTI CID FTMS 0 0 0 10446 109544.6328125 0.4330100421969542 -13 0.0850982666015625 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 66254.8 1.0 5642 4803 10446 SUDHL4_400M_050219_1,10447 SUDHL4_400M_050219_1,10447, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10448 59.061 333.0 20437.0 25 0 1448.2 -1 0 22 1068.4919749830276 0 1068.854174792767 PEAK CID FTMS 0 0 0 -1 0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 13539.8 1.0 5643 4803 10446 SUDHL4_400M_050219_1,10448 SUDHL4_400M_050219_1,10448, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10449 59.075 800.0 26040.0 25 0 2523.3 -1 0 56 921.3233182848386 0 921.2780639529228 PEAK CID FTMS 0 0 0 10446 25581.671875 1.0 0 0.0 3 5 V 1 -1 1.2591 0.0 0.0 0.068404 0.0 0.0 983.076554927296 755.4492891900999 1738.5258441173958 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.068404 - 1 + 1 2.282 23958.5 0.9200000166893004 5644 4803 10446 SUDHL4_400M_050219_1,10449 SUDHL4_400M_050219_1,10449, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10457 59.116 800.0 7422.3 25 0 1088.5 -1 0 18 1178.747363269329 0 1178.747363269329 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 13468.0 0.3799999952316284 5645 4810 10456 SUDHL4_400M_050219_1,10457 SUDHL4_400M_050219_1,10457, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10462 59.14 560.0 33720.0 25 0 2545.1 -1 0 37 1122.553659870662 0 1122.553393542767 PEAK CID FTMS 0 0 0 -1 0 1 5 E 1 -1 5.4846 0.0 0.0 0.24451 0.0 0.0 1853.932244681183 257.09397302799067 2111.0262177091736 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.24451 - 4 + 1 2.282 22827.2 1.0 5646 4814 10461 SUDHL4_400M_050219_1,10462 SUDHL4_400M_050219_1,10462, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10467 59.168 800.0 18874.0 25 0 1679.8 -1 0 39 1105.735400378704 0 1105.735400378704 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 18642.3 0.3700000047683716 5647 4818 10466 SUDHL4_400M_050219_1,10467 SUDHL4_400M_050219_1,10467, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10471 59.193 800.0 19644.0 25 0 2335.7 -1 0 40 1092.555712878704 0 1092.555712878704 PEAK CID FTMS 0 0 0 -1 0 1 5 {I|L} 1 -1 3.0989 0.0 0.0 0.14195 0.0 0.0 1320.7057117908082 746.2840059869749 2066.989717777783 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.14195 - 11 + 1 2.282 18196.3 0.8500000238418579 5648 4821 10470 SUDHL4_400M_050219_1,10471 SUDHL4_400M_050219_1,10471, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10475 59.217 800.0 34307.0 25 0 1989.6 -1 0 69 1020.21007078886 0 1020.21007078886 PEAK CID FTMS 0 0 0 -1 0 1 5 N 1 -1 1.9897 0.0 0.0 0.097611 0.0 0.0 923.8452381579948 997.4985445611936 1921.3437827191883 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.097611 - 4 + 1 2.282 28344.4 0.3199999928474426 5649 4824 10474 SUDHL4_400M_050219_1,10475 SUDHL4_400M_050219_1,10475, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10476 59.231 800.0 162300.0 25 0 25981.0 + 33887 SLFPGQVVI 9 97 959.5555874863264 958.5483110197264 1 959.5589477419852 MULTI CID FTMS 0 0 0 10474 122073.078125 0.4824301231621604 -32 0.2359161376953125 2 Unmodified _SLFPGQVVI_ ENSG00000014138|ENST00000265465|POLA2;ENST00000527850.5_1_11:65029833-65063521:+|nuORF;nc|ENSG00000014138|Q14181-2|POLA2 69.10491478415734 0.0214449631113747 5 {[QV]|[N{I|L}]|[RA]|[KV]}[PG]{M(Oxidation (M))|F}TVV{I|L} 9 4 + 65.269 0.0 0.0 6.8092 6.8092 84.266 0.0 0.0 0.0 2.79840696594043 16.478174818886373 2.79840696594043 1.6028974392593796 0 0.0 1.154901959985743 1.1861818737241734 0.5994850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}[PG]{M(Oxidation (M))|F}TVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[PG]VT{M(Oxidation (M))|F}V{I|L};{[QG]|[NA]}PV{M(Oxidation (M))|F}TVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VCVTVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[PG]V{M(Oxidation (M))|F}TV{I|L};[PG]QV{M(Oxidation (M))|F}TVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}TG{I|L}{I|L}ES{I|L};{[QG]|[NA]}PVVT{M(Oxidation (M))|F}V{I|L};[PG]QVVT{M(Oxidation (M))|F}V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}TG{I|L}MVV{I|L} 6.8092;6.642;6.5172;6.5164;6.4932;6.4346;6.3593;6.35;6.2674;6.2656 -;-;-;-;-;-;-;-;-;- 1980 1 2.282 91514.2 0.7200000286102295 5650 4824 10474 SUDHL4_400M_050219_1,10476 SUDHL4_400M_050219_1,10476,SLFPGQVVI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10491 59.292 320.0 120850.0 25 0 22645.0 + 25702 NIFPYPVGV 9 46 1005.5392577284836 1004.5319812618836 1 1005.540942370892 MULTI CID FTMS 0 0 0 10490 85456.53125 0.5319731936660266 61 -0.4284248352050781 1 Unmodified _NIFPYPVGV_ ENSG00000139218|ENST00000369367|SCAF11;nc|ENSG00000139218|Q99590-2|SCAF11 60.38955033654506 0.025866396858536 5 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PY[VP][VG] 9 0 + 51.934 0.0 0.0 5.1699 5.1699 90.021 0.0 0.0 0.0 14.053331073971762 14.48638135581298 14.053331073971762 17.506309713918775 0 2.0 1.0969100130080565 0.0 0.6861818737241735 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PY[VP][VG];[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y[VP][VG];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}[VP]R 5.1699;3.4272;2.9525 +;-;- + 79 1 2.282 38428.9 1.0 5651 4838 10490 SUDHL4_400M_050219_1,10491 SUDHL4_400M_050219_1,10491,NIFPYPVGV True True NIFPYPVGV 59.291717 1005.54094237089 3950581.5 10490.0 ENSG00000139218|ENST00000369367|SCAF11;;nc|ENSG00000139218|Q99590-2|SCAF11 7.401325066884358 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10499 59.332 800.0 11046.0 25 0 2193.3 -1 0 20 1143.1621727594834 0 1142.818652331829 PEAK CID FTMS 0 0 0 10498 10190.3125 0.159107613607192 -2 0.0080909729003906 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 14269.5 0.3600000143051147 5652 4845 10498 SUDHL4_400M_050219_1,10499 SUDHL4_400M_050219_1,10499, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10504 59.361 800.0 17365.0 25 0 949.74 -1 0 37 1189.219672969114 0 1188.889697253704 PEAK CID FTMS 0 0 0 10503 27174.91796875 0.4723610764824203 5 -0.0445556640625 1 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.29413 0.0 0.0 1136.8873917372532 1089.4320772760375 2226.319469013291 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.29413 - 4 + 1 2.282 20797.7 0.3400000035762787 5653 4849 10503 SUDHL4_400M_050219_1,10504 SUDHL4_400M_050219_1,10504, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10507 59.381 778.0 66100.0 25 0 4241.2 + 33791 SLDALLSQV 9 82 945.5260616986276 944.5187852320277 1 945.5265380740166 MULTI CID FTMS 0 0 0 10506 42038.76171875 0.4763866016925346 1 -0.0160255432128906 1 Unmodified _SLDALLSQV_ ENSG00000159479|ENST00000372457|MED8;nc|ENSG00000159479|Q96G25-2|MED8 88.95385435242217 0.0153473310052057 5 {NN|[MP]|[D{I|L}]|[EV]}SA{I|L}{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 65.978 0.0 0.0 6.9854 6.9854 87.716 0.0 0.0 0.0 3.65279269351241 40.40484985457368 3.65279269351241 4.044387449636204 0 1.5356668758921828 0.0 2.1747425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}SA{I|L}{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]DS{I|L}{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}AS{I|L}{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}S{I|L}A{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]D{I|L}S{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}A{I|L}S{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]{[TV]|[{I|L}S]}D{I|L}S{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]DK[KG]S{[QV]|[N{I|L}]|[RA]|[KV]};{[QS]|[NT]}KK{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}AK[KG]S{[QV]|[N{I|L}]|[RA]|[KV]} 6.9854;6.5572;6.3223;5.202;5.1466;4.9118;3.6124;2.5248;2.4125;2.2899 -;-;-;-;-;-;-;-;-;- 358 1 2.282 44709.3 1.0 5654 4851 10506 SUDHL4_400M_050219_1,10507 SUDHL4_400M_050219_1,10507,SLDALLSQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10516 59.426 800.0 164960.0 25 0 9034.2 + 1573 ALLEGLTVV 9 108 914.5563680986256 913.5490916320256 1 914.5559570193292 MULTI CID FTMS 0 0 0 10515 85916.28125 0.5315296173781578 -4 0.0160789489746093 1 Unmodified _ALLEGLTVV_ ENSG00000111481|ENST00000262061|COPZ1;ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-3|COPZ1;nc|ENSG00000111481|P61923-4|COPZ1;nc|ENSG00000111481|P61923-5|COPZ1 81.61307344734483 0.0171259190214613 5 [{I|L}A]{I|L}EG{I|L}TVV 9 0 + 72.786 0.0 0.0 7.9673 7.9673 88.86 0.0 0.0 0.0 5.642492736872612 46.283608546239805 5.642492736872612 3.5514342509639505 0 1.0565533887547016 0.0 1.5387254899964358 0.0 + + [{I|L}A]{I|L}EG{I|L}TVV;[{I|L}A]{I|L}EG{I|L}S{I|L}V;[{I|L}A]{I|L}DA{I|L}TVV;[{I|L}A]{I|L}GE{I|L}TVV;[{I|L}A]{I|L}EGT{I|L}VV;[{I|L}A]{I|L}DA{I|L}S{I|L}V;{I|L}{I|L}AEG{I|L}TVV;{[QN]|[E{I|L}]|[KN]}GA{I|L}{I|L}TVV;[{I|L}A]{I|L}EVATVV;[{I|L}A]DA{I|L}{I|L}TVV 7.9673;7.5786;7.3083;7.0423;7.0293;6.9196;6.916;6.8498;6.8462;6.8065 +;-;-;-;-;-;-;-;-;- + 4708 1 2.282 89640.2 0.7900000214576721 5655 4859 10515 SUDHL4_400M_050219_1,10516 SUDHL4_400M_050219_1,10516,ALLEGLTVV True True ALLEGLTVV 59.425504 914.555957019329 795528.6875 10515.0 nc|ENSG00000111481|P61923-4|COPZ1;;ENST00000551412.5_1_12:54718935-54741629:+|nuORF;;ENSG00000111481|ENST00000262061|COPZ1;;nc|ENSG00000111481|P61923-3|COPZ1;;nc|ENSG00000111481|P61923-5|COPZ1 5.506030559539795 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10521 59.454 800.0 7463.2 25 0 625.62 -1 0 18 1193.623950183392 0 1193.623950183392 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 16015.8 0.3100000023841858 5656 4863 10520 SUDHL4_400M_050219_1,10521 SUDHL4_400M_050219_1,10521, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10525 59.475 564.0 24831.0 25 0 1070.2 -1 0 44 911.3980797854812 0 911.3318359255792 PEAK CID FTMS 0 0 0 10524 6957.421875 0.9535349144295968 -1 0.0040626525878906 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 19624.2 1.0 5657 4866 10524 SUDHL4_400M_050219_1,10525 SUDHL4_400M_050219_1,10525, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10528 59.495 800.0 11711.0 25 0 1112.5 -1 0 27 1154.867480456829 0 1154.867480456829 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 19356.3 0.4099999964237213 5658 4868 10527 SUDHL4_400M_050219_1,10528 SUDHL4_400M_050219_1,10528, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10534 59.527 800.0 148740.0 25 0 26935.0 + 33888 SLFPGQVVI 9 84 959.5555874863264 958.5483110197264 1 959.5566284060478 MULTI CID FTMS 0 0 0 10533 155018.921875 0.612631373938508 17 -0.1333961486816406 1 Unmodified _SLFPGQVVI_ ENSG00000014138|ENST00000265465|POLA2;ENST00000527850.5_1_11:65029833-65063521:+|nuORF;nc|ENSG00000014138|Q14181-2|POLA2 60.07390631473393 0.0260411565414776 5 {[QV]|[N{I|L}]|[RA]|[KV]}[PG]VT{M(Oxidation (M))|F}V{I|L} 9 5 + 54.275 0.0 0.0 5.6622 5.6622 79.202 0.0 0.0 0.0 4.277034080690356 27.93227730987077 4.277034080690356 0.0443219174010778 0 0.0 0.0 1.066901560044258 1.075257498915995 {[QV]|[N{I|L}]|[RA]|[KV]}[PG]VT{M(Oxidation (M))|F}V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[PG]{M(Oxidation (M))|F}TVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[PG]V{M(Oxidation (M))|F}TV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[PG]{M(Oxidation (M))|F}VTV{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGQVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[DS]|[MA]|[CV]|TT}VTVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MG]|[TS]}TVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[SA]|[TG]}MVV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[PG]S{I|L}{M(Oxidation (M))|F}V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[PG]VTV{M(Oxidation (M))|F}{I|L} 5.6622;5.6576;5.6024;4.8452;4.8091;4.6902;4.5891;4.3383;4.3374;4.1965 -;-;-;-;+;-;-;-;-;- + 722 1 2.282 85448.7 0.4699999988079071 5659 4873 10533 SUDHL4_400M_050219_1,10534 SUDHL4_400M_050219_1,10534,SLFPGQVVI True True SLFPGQVVI 59.527451 959.556628406048 4558922.5 10533.0 ENST00000527850.5_1_11:65029833-65063521:+|nuORF;;ENSG00000014138|ENST00000265465|POLA2;;nc|ENSG00000014138|Q14181-2|POLA2 5.9205827713012695 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10535 59.541 800.0 77290.0 25 0 12571.0 + 40964 VLWPESISV 9 77 1029.5621550622138 1028.554878595614 1 1029.560351550579 MULTI CID FTMS 0 0 0 10533 105676.359375 0.3616794455004344 33 -0.2530021667480469 2 Unmodified _VLWPESISV_ ENSG00000077238|ENST00000395762|IL4R;nc|ENSG00000077238|P24394-3|IL4R 48.345845343767074 0.0439967357579942 5 [EP]S{I|L}SVV{I|L} 8 5 54.334 0.0 0.0 5.2826 0.0 0.0 0.0 201.08862578209803 201.08862578209803 26.499322410898564 0.0 0.0 0.0 0 0.0 0.0 2.4604093769761874 0.0 [EP]S{I|L}SVV{I|L} 5.2826 - 610 1 2.282 48409.6 0.3400000035762787 5660 4873 10533 SUDHL4_400M_050219_1,10535 SUDHL4_400M_050219_1,10535,VLWPESISV True True VLWPESISV 59.541315 1029.56035155058 1585730.5 10533.0 ENSG00000077238|ENST00000395762|IL4R;;nc|ENSG00000077238|P24394-3|IL4R 4.408246199289958 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10538 59.562 800.0 26037.0 25 0 1403.5 -1 0 55 1159.523364245892 0 1159.523364245892 PEAK CID FTMS 0 0 0 -1 0 1 5 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.13375 0.0 0.0 1551.6587147204966 615.2985323541624 2166.957247074659 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.13375 - 3 + 1 2.282 20368.7 0.3499999940395355 5661 4875 10537 SUDHL4_400M_050219_1,10538 SUDHL4_400M_050219_1,10538, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10539 59.576 800.0 14113.0 25 0 1047.0 -1 0 31 1124.6342671438608 0 1124.637499988079 PEAK CID FTMS 0 0 0 10537 78082.7109375 1.0 0 0.0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 16445.4 0.3600000143051147 5662 4875 10537 SUDHL4_400M_050219_1,10539 SUDHL4_400M_050219_1,10539, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10551 59.632 800.0 114640.0 25 0 9820.5 + 8927 FALSEAMGL 9 110 938.4650502385596 937.4577737719596 1 938.4637328982352 MULTI CID FTMS 0 0 0 10550 54265.9765625 0.4200368621381551 -1 0.0040702819824218 1 Unmodified _FALSEAMGL_ ENSG00000135390|ENST00000394349|ATP5MC2;ENSG00000154518|ENST00000284727|ATP5MC3;ENSG00000159199|ENST00000393366|ATP5MC1;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;ENST00000513781.5_1_17:46970480-46973128:+|nuORF;nc|ENSG00000135390|Q06055-2|ATP5MC2;nc|ENSG00000135390|Q06055-3|ATP5MC2 50.855029805455786 0.0384952370514206 5 {[ES]|[DT]|[{I|L}C]}A{I|L}{M(Oxidation (M))|F}AMG{I|L} 9 4 + 55.313 0.0 0.0 5.9003 5.9003 80.077 0.0 0.0 0.0 0.2403733296860792 0.2403733296860792 0.2403733296860792 0.2403733296860792 0 0.6203715150305281 0.0 1.829689690656103 0.0 {[ES]|[DT]|[{I|L}C]}A{I|L}{M(Oxidation (M))|F}AMG{I|L};{[MS]|[{M(Oxidation (M))|F}A]}TADPG{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}A{I|L}AMG{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}A{M(Oxidation (M))|F}{I|L}AMG{I|L};{[ES]|[DT]|[{I|L}C]}A{I|L}A{M(Oxidation (M))|F}MG{I|L};{[MS]|[{M(Oxidation (M))|F}A]}TDAPG{I|L}{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}AA{I|L}MG{I|L}{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}TD{I|L}AMG{I|L};{[ES]|[DT]|[{I|L}C]}A{I|L}{M(Oxidation (M))|F}A[PG]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}AA{I|L}{M(Oxidation (M))|F}MG{I|L} 5.9003;5.8747;5.8603;5.7213;5.5691;5.5507;5.4453;5.3424;5.2819;5.1541 -;-;-;-;-;-;-;-;-;- 2690 1 2.282 66007.2 0.7200000286102295 5663 4886 10550 SUDHL4_400M_050219_1,10551 SUDHL4_400M_050219_1,10551,FALSEAMGL True True FALSEAMGL 59.632292 938.463732898235 649137.8125 10550.0 nc|ENSG00000135390|Q06055-3|ATP5MC2;;ENST00000502964.5_1_17:46971694-46973128:+|nuORF;;ENSG00000154518|ENST00000284727|ATP5MC3;;nc|ENSG00000135390|Q06055-2|ATP5MC2;;ENSG00000135390|ENST00000394349|ATP5MC2;;ENSG00000159199|ENST00000393366|ATP5MC1;;ENST00000513781.5_1_17:46970480-46973128:+|nuORF 0.8151325186093649 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10558 59.669 800.0 11480.0 25 0 902.36 -1 0 23 1111.528124988079 0 1111.528124988079 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 17773.7 0.449999988079071 5664 4892 10557 SUDHL4_400M_050219_1,10558 SUDHL4_400M_050219_1,10558, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10559 59.675 357.0 33282.0 25 0 1812.5 -1 0 39 1173.685839831829 0 1173.685839831829 PEAK CID FTMS 0 0 0 -1 0 2 5 D 1 -1 3.9794 0.0 0.0 0.16967 0.0 0.0 1823.0785145251832 404.2222384088501 2227.3007529340334 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.16967 - 2 + 1 2.282 19409.5 1.0 5665 4892 10557 SUDHL4_400M_050219_1,10559 SUDHL4_400M_050219_1,10559, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10562 59.696 800.0 9952.1 25 0 2304.8 -1 0 20 1054.469165027142 0 1054.469165027142 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 15926.7 0.3400000035762787 5666 4894 10561 SUDHL4_400M_050219_1,10562 SUDHL4_400M_050219_1,10562, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10573 59.746 701.0 32200.0 25 0 1952.4 + 31173 RLPEIYIQL 9 58 572.8400380471838 1143.6655231611676 2 572.8411132693291 MULTI CID FTMS 0 0 0 10572 14265.9072265625 0.0372005461119557 -4 0.0156059265136718 1 Unmodified _RLPEIYIQL_ ENSG00000103966|ENST00000220325|EHD4 11.494710602746466 0.5255349189887087 5 {I|L}Y{I|L}[Q{I|L}] 5 4 21.198 0.0 0.0 1.8535 0.0 0.0 495.28062636543126 0.0 495.28062636543126 0.0 10.740312677277188 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 + {I|L}Y{I|L}[Q{I|L}] 1.8535 + + 26 1 2.282 23579.1 1.0 5667 4904 10572 SUDHL4_400M_050219_1,10573 SUDHL4_400M_050219_1,10573,RLPEIYIQL False True RLPEIYIQL 59.746123 572.841113269329 252988.875 10572.0 ENSG00000103966|ENST00000220325|EHD4 4.805727481842041 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10574 59.76 800.0 7883.0 25 0 633.34 -1 0 21 1184.6102846491062 0 1184.612597644329 PEAK CID FTMS 0 0 0 10572 92179.21875 1.0 0 0.0 2 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 14219.2 0.5699999928474426 5668 4904 10572 SUDHL4_400M_050219_1,10574 SUDHL4_400M_050219_1,10574, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10579 59.78 293.0 78163.0 25 0 2177.0 -1 0 72 996.5831806822404 0 996.481494128704 PEAK CID FTMS 0 0 0 10578 23612.53515625 0.255453264901531 -1 0.0038337707519531 1 5 P 1 -1 3.0989 0.0 0.0 0.15564 0.0 0.0 874.1346708353809 1016.9334810846312 1891.068151920012 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.15564 - 4 + 1 2.282 24629.9 1.0 5669 4908 10578 SUDHL4_400M_050219_1,10579 SUDHL4_400M_050219_1,10579, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10582 59.79 209.0 274470.0 25 0 18442.0 -1 0 127 830.6108749295466 0 830.7802001833916 PEAK CID FTMS 0 0 0 10581 21436.607421875 1.0 0 0.0 1 5 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.42127 0.0 0.0 1377.072627689368 132.04615198306877 1509.1187796724369 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.42127 - 19 + 1 2.282 43098.5 1.0 5670 4910 10581 SUDHL4_400M_050219_1,10582 SUDHL4_400M_050219_1,10582, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10583 59.803 800.0 68370.0 25 0 4541.6 -1 0 121 799.5994259485751 0 799.8193237185478 PEAK CID FTMS 0 0 0 10581 37777.1328125 0.9410431381798834 1 -0.0468635559082031 2 5 W 1 -1 5.4846 0.0 0.0 0.34339 0.0 0.0 1075.00212230555 333.0863436334594 1408.0884659390094 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.34339 - 16 + 1 2.282 43994.3 0.7099999785423279 5671 4910 10581 SUDHL4_400M_050219_1,10583 SUDHL4_400M_050219_1,10583, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10584 59.814 586.0 11807.0 25 0 1141.6 -1 0 21 1058.271115737621 0 1058.076220691204 PEAK CID FTMS 0 0 0 -1 0 3 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 13339.3 1.0 5672 4910 10581 SUDHL4_400M_050219_1,10584 SUDHL4_400M_050219_1,10584, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10585 59.818 208.0 28301.0 25 0 2589.2 -1 0 18 1047.755541980267 0 1047.755541980267 PEAK CID FTMS 0 0 0 -1 0 4 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 12635.9 1.0 5673 4910 10581 SUDHL4_400M_050219_1,10585 SUDHL4_400M_050219_1,10585, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10586 59.83 697.0 8782.0 25 0 954.71 -1 0 20 1191.218920886517 0 1191.218920886517 PEAK CID FTMS 0 0 0 -1 0 5 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 20744.8 1.0 5674 4910 10581 SUDHL4_400M_050219_1,10586 SUDHL4_400M_050219_1,10586, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10588 59.848 800.0 6780.1 25 0 656.62 -1 0 20 975.0860456180902 0 974.7053710818292 PEAK CID FTMS 0 0 0 -1 0 1 5 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.282 15546.6 0.4699999988079071 5675 4911 10587 SUDHL4_400M_050219_1,10588 SUDHL4_400M_050219_1,10588, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10595 59.874 175.0 688320.0 25 0 347490.0 + 20622 LLPPPIAPL 9 56 930.6025191242586 929.5952426576586 1 930.6023437380792 MULTI CID FTMS 0 0 0 10594 464028.0 0.4318596391955983 7 -0.0437583923339843 1 Unmodified _LLPPPIAPL_ ENSG00000136378|ENST00000388820|ADAMTS7 45.7499826716795 0.0496882803020414 5 {I|L}{I|L}PPA{[HG]|PP}{I|L}{I|L} 9 4 + 40.864 0.0 0.0 4.3959 4.3959 83.166 0.0 0.0 0.0 6.478174818886373 26.249387366083 6.478174818886373 7.833012287035494 0 1.5 0.0 0.0 0.0 {I|L}{I|L}PPA{[HG]|PP}{I|L}{I|L};{[HG]|PP}{I|L}PPA{I|L}{I|L}{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{I|L}{I|L}{I|L};{[HG]|PP}{I|L}{I|L}A{[HG]|PP}{I|L}{I|L} 4.3959;3.5532;3.1857;3.1307 -;-;-;- 132 1 2.282 82210.9 1.0 5676 4917 10594 SUDHL4_400M_050219_1,10595 SUDHL4_400M_050219_1,10595,LLPPPIAPL True True LLPPPIAPL 59.873692 930.602343738079 9840556.0 10594.0 ENSG00000136378|ENST00000388820|ADAMTS7 0.5227324565251669 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10601 59.907 800.0 57195.0 25 0 7562.1 + 40602 VLADQVWTL 9 59 1044.5723902664763 1043.5651137998764 1 1044.575122058392 MULTI CID FTMS 0 0 0 10600 79695.953125 0.2804217645784608 11 -0.0615272521972656 1 Unmodified _VLADQVWTL_ ENSG00000114026|ENST00000344629|OGG1;nc|ENSG00000114026|O15527-2|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-8|OGG1 51.629811660486645 0.0367964933207742 5 {[QD]|[EN]|[WG]|[KD]|[RS]}VA{I|L}VWT{I|L} 9 5 + 80.653 0.0 0.0 7.7286 7.7286 86.259 0.0 0.0 0.0 1.7609125905568137 16.478174818886373 1.7609125905568137 1.7609125905568137 0 0.3494850021680094 0.0 1.1549471895720984 1.0994850021680094 {[QD]|[EN]|[WG]|[KD]|[RS]}VA{I|L}VWT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DA{I|L}VWT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VA{I|L}VDAT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AV{I|L}VWT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DA{I|L}VDAT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AV{I|L}VDAT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}VVWT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VAV{I|L}WT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}VVDAT{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DAV{I|L}WT{I|L} 7.7286;7.5599;7.5448;7.4402;7.376;7.2563;7.1517;7.1053;6.9678;6.9365 -;-;-;-;-;-;-;-;-;- 1752 1 2.282 38882.0 0.9200000166893004 5677 4922 10600 SUDHL4_400M_050219_1,10601 SUDHL4_400M_050219_1,10601,VLADQVWTL True False VLADQVWTL 59.907373 1044.57512205839 833152.0 10600.0 nc|ENSG00000114026|O15527-5|OGG1;;nc|ENSG00000114026|O15527-3|OGG1;;nc|ENSG00000114026|O15527-6|OGG1;;nc|ENSG00000114026|O15527-2|OGG1;;ENSG00000114026|ENST00000344629|OGG1;;nc|ENSG00000114026|O15527-4|OGG1;;nc|ENSG00000114026|O15527-7|OGG1;;nc|ENSG00000114026|O15527-8|OGG1 5.553020000457764 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_1 10606 59.928 311.0 22219.0 25 0 2044.9 -1 0 20 1183.0674660553652 0 1182.668017566204 PEAK CID FTMS 0 0 0 10605 10761.5595703125 0.4770490968703644 -1 0.0041160583496093 1 5 R 1 -1 6.9897 0.0 0.0 0.29566 0.0 0.0 1502.1896063277245 702.7962740533811 2204.9858803811053 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.29566 - 1 + 1 2.282 15344.8 1.0 5678 4926 10605 SUDHL4_400M_050219_1,10606 SUDHL4_400M_050219_1,10606, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10619 59.989 800.0 29500.0 25 0 823.53 -1 0 63 1160.6277419146395 0 1160.586962878704 PEAK CID FTMS 0 0 0 10618 39543.796875 0.3528998606697002 -1 0.0041160583496093 1 5 T 1 -1 6.9897 0.0 0.0 0.30138 0.0 0.0 815.5957415423671 1399.5816134088502 2215.177354951217 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.30138 - 8 + 1 2.282 23069.2 0.3400000035762787 5679 4938 10618 SUDHL4_400M_050219_1,10619 SUDHL4_400M_050219_1,10619, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10622 60.01 800.0 72719.0 25 0 3448.4 -1 0 96 936.1194335818292 0 936.1194335818292 PEAK CID FTMS 0 0 0 -1 0 1 5 S 1 -1 3.4949 0.0 0.0 0.18687 0.0 0.0 1648.122978636511 132.04616724185783 1780.169145878369 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.18687 - 8 + 1 2.282 42038.5 0.3700000047683716 5680 4940 10621 SUDHL4_400M_050219_1,10622 SUDHL4_400M_050219_1,10622, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_1 10623 60.024 800.0 75387.0 25 0 1004.4 -1 0 109 1090.914233386517 0 1090.914233386517 PEAK CID FTMS 0 0 0 -1 0 2 5 VA 2 -1 6.4537 0.0 0.0 0.29606 0.0 0.0 1855.633720824012 151.05202661685783 2006.68574744087 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VA 0.29606 - 7 + 1 2.282 44422.1 0.3400000035762787 5681 4940 10621 SUDHL4_400M_050219_1,10623 SUDHL4_400M_050219_1,10623, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 390 1.5777 800.0 43092.0 25 0 10571.0 + 17032 KKKKKKVKKI 10 47 419.3153012391755 0 419.3155700564384 PEAK CID FTMS 0 0 0 389 79438.3828125 0.6676107528521035 -215 0.8645050525665283 1 Unmodified _KKKKKKVKKI_ REV__ENSG00000187257|ENST00000334955|RSBN1L 0.0 0.3961065659209837 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 35853.5 0.3600000143051147 0 388 389 SUDHL4_400M_050219_2,390 SUDHL4_400M_050219_2,390,KKKKKKVKKI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 1644 6.6241 536.0 102370.0 25 0 73480.0 3466 CERERERER 9 29 631.8033498133417 0 631.8035766482353 PEAK CID FTMS 0 0 0 1643 188214.78125 0.9334283260943198 19 -0.0840368270874023 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 44618.1 1.0 1 1641 1643 SUDHL4_400M_050219_2,1644 SUDHL4_400M_050219_2,1644,CERERERER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 1845 7.4389 687.0 226280.0 25 0 35130.0 + 11984 GPEAGRKPA 9 101 441.74353147439393 881.4725100155879 2 441.7429382205009 MULTI CID FTMS 0 0 0 1844 173578.09375 0.1147448608464476 -14 0.0564765930175781 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 76.82478488871298 0.0184607444814265 6 GPEAGRKPA 9 0 + 91.737 0.0 0.0 10.407 10.407 96.326 0.0 0.0 0.0 49.93623790491817 8.697114610913488 8.697114610913488 11.478174818886371 0 2.4916440611282624 2.0 0.4247425010840047 0.0 + + GPEAGRKPA;GPEQRKPA;[PG]EAGRKPA;[EP]GAGRKPA;ADPAGRKPA;[EP]QGRKPA;{[DA]|[EG]}PAGRKPA;[EP]AGGRKPA;ADPQRKPA;[VS]K[VG]GA[HQ] 10.407;9.1051;8.6349;7.075;5.6696;5.3763;5.1158;4.9768;4.3674;3.6886 +;-;+;-;-;-;-;-;-;- + 375 + 1 2.22 122072.1 1.0 2 1841 1844 SUDHL4_400M_050219_2,1845 SUDHL4_400M_050219_2,1845,GPEAGRKPA True True GPEAGRKPA 7.4389008 441.742938220501 18037480.5 1844.0 nc|ENSG00000204469|P48634-3|PRRC2A;;ENSG00000204469|ENST00000376033|PRRC2A;;nc|ENSG00000204469|P48634-2|PRRC2A 6.373905976613362 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 1848 7.4594 800.0 78274.0 25 0 3882.8 + -1 GADAMAEVFNA 11 107 556.2418426495578 1110.4691323659156 2 556.2414428591728 MULTI CID FTMS 0 0 0 1847 81660.375 0.5353114067500526 -12 0.0589618682861328 1 Oxidation (M) _GADAM(Oxidation (M))AEVFNA_ REV__ENSG00000133706|ENST00000394434|LARS1;REV__nc|ENSG00000133706|Q9P2J5-2|LARS1;REV__nc|ENSG00000133706|Q9P2J5-3|LARS1 32.78568957990786 0.3235288296534633 6 [AG]DAHEAGAQGQ 12 -1 + 83.846 0.0 0.0 7.5505 7.5505 84.799 0.0 0.0 0.0 2.0657783584639446 7.931825014007217 2.0657783584639446 2.0657783584639446 0 0.9291746928241126 2.0 1.7544321917401078 0.0 [AG]DAHEAGAQGQ;{[DA]|[EG]}QHEAGAQGQ;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQGQ;[AG]GEHEAGAQGQ;[AG]ADHEAGAQGQ;[AG]DAHEAQQGQ;[AG]DAHEQAQGQ;{[QG]|[NA]}EHEAGAQGQ;[AG]GEHEAQQGQ;[AG]ADHEAQQGQ 7.5505;7.3645;7.2495;7.2358;7.2358;7.2262;7.2199;6.9348;6.9115;6.9115 -;-;-;-;-;-;-;-;-;- 1453 1 2.22 49566.0 0.3700000047683716 3 1843 1847 SUDHL4_400M_050219_2,1848 SUDHL4_400M_050219_2,1848,GADAMAEVFNA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 1860 7.5122 571.0 135270.0 25 0 10329.0 -1 0 66 461.2376341499604 1840.9214307334416 4 461.4858886599541 MULTI CID FTMS 0 0 0 1859 56029.15625 0.8116841615737392 1 -0.0125393867492675 1 6 K 1 -1 14.292 0.0 0.0 0.77634 0.0 0.0 1694.8161431131275 0.0 1694.8161431131275 0.0 -1.817496819840656 -1.817496819840656 0.0 0 0.0 0.0 0.0 0.2302046884880938 K 0.77634 - 69 + 1 2.22 65881.4 1.0 4 1854 1859 SUDHL4_400M_050219_2,1860 SUDHL4_400M_050219_2,1860, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 1900 7.6811 800.0 47970.0 25 0 30469.0 6705 ECRLERPCLGS 11 30 631.8034782226695 0 631.8029052615166 PEAK CID FTMS 0 0 0 1899 41796.00390625 0.0152752368961661 -461 1.892938137054444 1 Unmodified _ECRLERPCLGS_ ENST00000409587.5_1_19:40854631-40871796:+|nuORF 1.0714618166137932 0.4761840153648598 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 35584.6 0.3300000131130218 5 1893 1899 SUDHL4_400M_050219_2,1900 SUDHL4_400M_050219_2,1900,ECRLERPCLGS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 1902 7.6877 136.0 281250.0 25 0 37580.0 + 11985 GPEAGRKPA 9 55 441.74353147439393 881.4725100155879 2 441.7431518435478 MULTI CID FTMS 0 0 0 1901 436936.125 0.2888392986624273 39 -0.1716699600219726 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 39.94969957227396 0.0757326808254658 6 GPEA 4 5 64.68 0.0 0.0 7.3378 0.0 0.0 0.0 524.2955416315061 524.2955416315061 53.7113751626007 0.0 0.0 0.0 0 1.274227503252014 2.0 0.0 0.0 + GPEA 7.3378 + + 28 + 1 2.22 37841.5 1.0 6 1894 1901 SUDHL4_400M_050219_2,1902 SUDHL4_400M_050219_2,1902,GPEAGRKPA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 1938 7.8408 800.0 102570.0 25 0 14371.0 + 35656 SVDARMREEK 10 108 407.5391825446777 1219.5957182342331 3 407.5388061404228 MULTI CID FTMS 0 0 0 1937 80987.1953125 0.3656602388991096 -6 0.0241851806640625 1 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 17.11289562659939 0.5604042439455784 6 [VS]QHHVDAAEK 11 -1 [VS]Q + + 36.311 26.695 8.4972 2.9773 2.9773 51.548 0.0 0.0 0.0 0.0 9.616260901735885 0.0 0.0 0 0.4247425010840047 0.0 0.2614393726401688 0.3054621874040891 [VS]QHHVDAAEK 2.9773 - 607 + 1 2.22 73572.8 0.8299999833106995 7 1929 1937 SUDHL4_400M_050219_2,1938 SUDHL4_400M_050219_2,1938,SVDARMREEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 1955 7.9175 800.0 49458.0 25 0 4492.3 + 35657 SVDARMREEK 10 62 610.8045443373236 1219.594535741447 2 610.8043701052666 MULTI CID FTMS 0 0 0 1954 48225.75390625 0.5753911616273188 1 -0.0163807868957519 1 Unmodified _SVDARMREEK_ REV__ENSG00000175985|ENST00000322564|PLEKHD1 33.4449034751529 0.2267874087365337 6 [VS]QHHVDAAEK 11 -1 + 116.97 0.0 0.0 9.5913 9.5913 91.315 0.0 0.0 0.0 6.635676108608976 6.635676108608976 6.635676108608976 6.635676108608976 0 3.504432191740108 1.6989700043360187 0.4247425010840047 0.7742275032520141 [VS]QHHVDAAEK;[VS]AGHHVDAAEK;[VS][AG]HHVDAAEK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}V[NG]AAEK;[VS]AGHHVD[DV]GK;[VS]QHHA[DV]AEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHHVDAAEK;[VS]QHHVD[DV]GK;[VS][KC]DV[NG]AAEK;[VS][AG]HHA[DV]AEK 9.5913;9.0472;8.8428;7.6359;7.4303;7.398;7.191;6.8845;6.7286;6.6495 -;-;-;-;-;-;-;-;-;- 1152 + 1 2.22 37251.6 0.3400000035762787 8 1945 1954 SUDHL4_400M_050219_2,1955 SUDHL4_400M_050219_2,1955,SVDARMREEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 1961 7.9499 800.0 82308.0 25 0 16641.0 + 11986 GPEAGRKPA 9 75 441.74353147439393 881.4725100155879 2 441.7432433962822 MULTI CID FTMS 0 0 0 1960 88140.359375 0.0582657238188517 95 -0.4192743301391601 1 Unmodified _GPEAGRKPA_ ENSG00000204469|ENST00000376033|PRRC2A;nc|ENSG00000204469|P48634-2|PRRC2A;nc|ENSG00000204469|P48634-3|PRRC2A 39.94969957227396 0.0757326808254658 6 GPEAS 5 5 68.047 0.0 0.0 7.7197 0.0 0.0 0.0 437.2517183893188 437.2517183893188 58.36973395437749 0.0 0.0 0.0 0 1.3494850021680094 1.6989700043360187 0.5 0.0 GPEAS 7.7197 - 59 + 1 2.22 56485.7 0.4399999976158142 9 1950 1960 SUDHL4_400M_050219_2,1961 SUDHL4_400M_050219_2,1961,GPEAGRKPA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 1975 8.0146 800.0 106730.0 25 0 27612.0 -1 ARTTPRRLCC 10 81 430.88813308502944 0 430.8882629275322 PEAK CID FTMS 0 0 0 1974 98297.4765625 0.6368532071958 53 -0.2380590438842773 1 2 Carbamidomethyl (C) _ARTTPRRLC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ ENST00000220507.4_1_15:41165524-41165925:-|nuORF 3.072263186857199 0.3961065659209837 6 T 1 -1 5.5065 0.0 0.0 0.64047 0.0 0.0 430.5277482483808 325.16303430728755 755.6907825556683 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 T 0.64047 + + 2 + 1 2.22 73164.9 0.449999988079071 10 1963 1974 SUDHL4_400M_050219_2,1975 SUDHL4_400M_050219_2,1975,ARTTPRRLCC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 1986 8.0672 800.0 72309.0 25 0 48168.0 3467 CERERERER 9 37 631.8034782226695 0 631.8035156130791 PEAK CID FTMS 0 0 0 1985 109234.8671875 0.0399222011116903 -381 1.635486125946045 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 48394.8 0.3899999856948852 11 1973 1985 SUDHL4_400M_050219_2,1986 SUDHL4_400M_050219_2,1986,CERERERER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2067 8.4013 800.0 89698.0 25 0 62128.0 3468 CERERERER 9 37 631.8034782226695 0 631.8035156130791 PEAK CID FTMS 0 0 0 2066 132747.8125 0.0485155061219171 -301 1.3186607360839844 1 Unmodified _CERERERER_ ENST00000374007.5_2_10:52514578-52514776:+|nuORF;REV__ENSG00000138398|ENST00000260970|PPIG;REV__ENST00000466142.1_1_2:170488267-170492739:+|nuORF;REV__nc|ENSG00000138398|Q13427-2|PPIG 0.5247636613948944 0.3444685223463735 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 59459.7 0.4699999988079071 12 2053 2066 SUDHL4_400M_050219_2,2067 SUDHL4_400M_050219_2,2067,CERERERER False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2115 8.603 749.0 140260.0 25 0 92327.0 + -1 CSQRKECIY 9 29 614.7768532877961 0 614.7767211794853 PEAK CID FTMS 0 0 0 2114 203550.46875 0.4041333358978352 -266 1.1899819374084473 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))CSQRKEC(Carbamidomethyl (C))IY_ REV__ENST00000589345.6_1_19:15962923-15965568:-|nuORF 0.5247636613948944 0.3444685223463735 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 83353.2 1.0 13 2100 2114 SUDHL4_400M_050219_2,2115 SUDHL4_400M_050219_2,2115,CSQRKECIY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2200 8.9529 800.0 84224.0 25 0 26677.0 -1 EVFGRQMAVIM 11 53 432.88507041845605 0 432.8849059939384 PEAK CID FTMS 0 0 0 2199 101537.234375 0.5411682966686634 -211 0.8856792449951172 1 Oxidation (M) _EVFGRQM(Oxidation (M))AVIM_ nc|ENSG00000269565|Q8NGA4|GPR32P1 2.843284757254958 0.4761840153648598 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 58646.0 0.4300000071525574 14 2184 2199 SUDHL4_400M_050219_2,2200 SUDHL4_400M_050219_2,2200,EVFGRQMAVIM False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 2259 9.1983 800.0 72659.0 25 0 34607.0 -1 0 56 490.3895156908475 489.3822392242475 1 490.3889648318291 MULTI CID FTMS 0 0 0 2258 94243.9453125 0.3976308918928914 285 -1.2966585159301758 1 6 {M(Oxidation (M))|F} 1 -1 11.99 0.0 0.0 2.45 0.0 0.0 324.3022811937772 0.0 324.3022811937772 0.0 11.989700043360187 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.45 - 3 + 1 2.22 50369.9 0.3700000047683716 15 2242 2258 SUDHL4_400M_050219_2,2259 SUDHL4_400M_050219_2,2259, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 2364 9.6289 800.0 72166.0 25 0 8506.2 + -1 IQRLETMK 8 75 517.7868856323963 1033.5592183315923 2 517.7864868044853 MULTI CID FTMS 0 0 0 2363 91729.9921875 0.2584342923078602 -79 0.3177776336669922 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 6 [KT]T[YK]TTK 8 -1 30.935 0.0 0.0 2.9931 0.0 0.0 0.0 78.9860206599125 78.9860206599125 0.9556125503637958 0.0 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 [KT]T[YK]TTK 2.9931 - 93 1 2.22 50994.8 0.3700000047683716 16 2346 2363 SUDHL4_400M_050219_2,2364 SUDHL4_400M_050219_2,2364,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2425 9.8735 223.0 257720.0 25 0 31211.0 + -1 IQRLETMK 8 75 517.7868856323963 1033.5592183315923 2 517.7867309451103 MULTI CID FTMS 0 0 0 2424 343225.9375 0.966983100556741 -19 0.076603889465332 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 6 [KT]T[YK]TTK 8 -1 34.486 0.0 0.0 3.3367 0.0 0.0 0.0 78.98691883067025 78.98691883067025 4.066818653688529 0.0 0.0 0.0 0 0.0 0.0 1.6861818737241734 0.0 [KT]T[YK]TTK 3.3367 - 173 1 2.22 49933.7 1.0 17 2406 2424 SUDHL4_400M_050219_2,2425 SUDHL4_400M_050219_2,2425,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2451 9.9849 705.0 142180.0 25 0 46437.0 + 28634 PVHILFHPDTD 11 65 430.8881109145006 0 430.8880493044853 PEAK CID FTMS 0 0 0 2450 152106.671875 0.6567724018185397 -256 1.0697851181030271 1 Unmodified _PVHILFHPDTD_ REV__CON__Q0VCM5 6.2057823575117 0.47618401536486 6 V 1 -1 3.9794 0.0 0.0 0.46285 0.0 0.0 429.54976811630746 328.1146029108032 757.6643710271106 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.46285 + + 5 + 1 2.22 84537.6 1.0 18 2431 2450 SUDHL4_400M_050219_2,2451 SUDHL4_400M_050219_2,2451,PVHILFHPDTD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2467 10.058 800.0 79125.0 25 0 5018.4 37148 THPDQAEK 8 91 463.222413962206 924.430274991212 2 463.2219726443291 MULTI CID FTMS 0 0 0 2466 88248.5234375 0.6291656464462129 -17 0.0790376663208007 1 Unmodified _THPDQAEK_ ENST00000546949.5_1_19:58514261-58515786:+|nuORF 16.942295170755138 0.6606234159769251 6 VDAAEK 6 4 35.877 0.0 0.0 3.881 0.0 0.0 293.1103419851558 0.0 293.1103419851558 0.0 19.769987279362624 0.0 0.0 0 1.4489700043360187 0.0 0.4247425010840047 0.3494850021680094 VDAAEK 3.881 - 98 + 1 2.22 53977.0 0.4099999964237213 19 2446 2466 SUDHL4_400M_050219_2,2467 SUDHL4_400M_050219_2,2467,THPDQAEK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2470 10.068 201.0 190000.0 25 0 27457.0 + 36069 SVQHVDAAEK 10 76 361.8526702037637 1082.5361812114909 3 361.8523132205009 MULTI CID FTMS 0 0 0 2469 194655.296875 0.0136003529829621 -30 0.1437702178955078 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 27.22323531849824 0.3570408936368626 6 HVDAAEK 7 3 27.813 0.0 0.0 2.5693 0.0 0.0 314.1594024479859 0.0 314.1594024479859 0.0 7.523408275244545 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.2887254899964357 + HVDAAEK 2.5693 + + 188 + 1 2.22 37997.7 1.0 20 2448 2469 SUDHL4_400M_050219_2,2470 SUDHL4_400M_050219_2,2470,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2471 10.082 800.0 138250.0 25 0 11391.0 + 36074 SVQHVDAAEK 10 101 542.2754112544662 1082.5362695757324 2 542.2756835818291 MULTI CID FTMS 0 0 0 2469 102339.2890625 0.0128016018828642 -32 0.1517219543457031 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 77.86735373965114 0.0186832066808089 6 SVQHVDAAEK 10 0 + 127.96 0.0 0.0 11.821 11.821 93.953 0.0 0.0 0.0 76.4363034371533 17.201140738196017 17.201140738196017 9.164539485499262 0 3.221848749616356 2.0 0.7614393726401688 0.805462187404089 + + SVQHVDAAEK;SV[AG]HVDAAEK;SVQHVADAEK;SV[AG]HVADAEK;[VS]AGHVDAAEK;[VS]QHVDAAEK;[VS]AGHVD[DV]GK;[VS]QHVD[DV]GK;[HV]QSVDAAEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK 11.821;10.974;10.966;10.12;8.5849;8.136;6.9718;6.5229;6.3421;6.1783 +;-;-;-;-;+;-;-;-;- + 2588 + 1 2.22 87658.8 0.3700000047683716 21 2448 2469 SUDHL4_400M_050219_2,2471 SUDHL4_400M_050219_2,2471,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2483 10.136 673.0 110520.0 25 0 12904.0 + -1 IQRLETMK 8 87 517.7868856323963 1033.5592183315923 2 517.7867919802666 MULTI CID FTMS 0 0 0 2482 136384.015625 0.3842397205060923 34 -0.1888093948364257 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 25.399314129420983 0.5099049743284904 6 [KT]T[YK]TTK 8 -1 34.786 0.0 0.0 3.3657 0.0 0.0 0.0 78.98627247378866 78.98627247378866 3.1310033969602813 0.0 0.0 0.0 0 0.0 0.0 1.4916440611282624 0.3494850021680094 [KT]T[YK]TTK 3.3657 - 299 1 2.22 61819.3 1.0 22 2459 2482 SUDHL4_400M_050219_2,2483 SUDHL4_400M_050219_2,2483,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2487 10.154 367.0 129890.0 25 0 16281.0 + 42958 VVSPKSQS 8 79 416.2323826886587 830.4502124441174 2 416.2320434451103 MULTI CID FTMS 0 0 0 2486 88319.96875 0.0210897027854022 -75 0.3542976379394531 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 20.453626601364224 0.6087503291685402 6 VVSPAS 6 3 50.054 0.0 0.0 6.0274 0.0 0.0 0.0 287.13547693424067 287.13547693424067 34.25373472475883 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.3807196863200844 0.0 VVSPAS 6.0274 - 80 + 1 2.22 43102.1 1.0 23 2462 2486 SUDHL4_400M_050219_2,2487 SUDHL4_400M_050219_2,2487,VVSPKSQS False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2494 10.19 800.0 178790.0 25 0 13322.0 + + 29272 QHVDAAEK 8 106 449.2251801802099 896.4358074272199 2 449.2250244021416 MULTI CID FTMS 0 0 0 2493 122873.0625 0.6532074244540494 -17 0.0837812423706054 1 Unmodified _QHVAAEDK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 37.97399986684836 0.2681860861828418 6 QHVDAAEK 8 -1 + 66.617 0.0 0.0 7.4313 7.4313 84.094 0.0 0.0 0.0 48.65779886772499 20.216977436784155 20.216977436784155 1.7609125905568137 0 0.723707643000167 0.0 0.6747425010840047 0.3807196863200844 QHVDAAEK;QHVADAEK 7.4313;7.2348 -;- 410 + 1 2.22 114122.9 0.3700000047683716 24 2468 2493 SUDHL4_400M_050219_2,2494 SUDHL4_400M_050219_2,2494,QHVAAEDK False False QHVDAAEK 10.190092 449.225024402142 774141.125 2493.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 6.278600374857585 2.0 False 8.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2503 10.235 800.0 57832.0 25 0 3322.4 -1 ICCCFQEK 8 70 572.7313395708945 1143.448126208589 2 572.7321655154228 MULTI CID FTMS 0 0 0 2502 71453.5703125 0.7819203128482488 -3 0.0121107101440429 1 3 Carbamidomethyl (C) _IC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))FQEK_ ENST00000532470.2_1_11:36657661-36669604:+|nuORF 8.593279151180031 0.7721714526254883 6 EK 2 -1 20.943 0.0 0.0 1.8316 0.0 0.0 868.2996714740171 0.0 868.2996714740171 0.0 9.974250108400469 0.0 0.0 0 0.0 0.0 0.5 0.25 EK 1.8316 + + 25 + 1 2.22 40238.8 0.3700000047683716 25 2476 2502 SUDHL4_400M_050219_2,2503 SUDHL4_400M_050219_2,2503,ICCCFQEK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2519 10.307 800.0 78453.0 25 0 4849.4 + 34588 SPHEAAVS 8 109 399.1930076241939 796.3714623151878 2 399.1927062869072 MULTI CID FTMS 0 0 0 2518 66140.53125 0.6097451764269847 -21 0.0963449478149414 1 Unmodified _SPHEAAVS_ REV__ENST00000488290.5_1_10:30602540-30654262:-|nuORF;REV__nc|ENSG00000107951|Q9NVV4-2|MTPAP 23.1484247019978 0.5573009939494978 6 VDAAEQ 6 -1 36.621 0.0 0.0 4.5985 0.0 0.0 165.05421645332189 0.0 165.05421645332189 0.0 18.83446431669617 0.0 0.0 0 1.6382104921644451 0.0 0.2614393726401688 0.0 VDAAEQ 4.5985 - 96 1 2.22 52959.6 1.0 26 2491 2518 SUDHL4_400M_050219_2,2519 SUDHL4_400M_050219_2,2519,SPHEAAVS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2523 10.32 4.3 8614200.0 25 0 1331300.0 + 36070 SVQHVDAAEK 10 76 361.8526702037637 1082.5361812114909 3 361.8526489138603 MULTI CID FTMS 0 0 0 2522 11046840.0 0.7718306450339486 16 -0.0698804855346679 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 6 [VS]AGHVDAAEK 11 2 [VS]AG + + 41.279 22.396 7.1288 3.8132 3.8132 53.596 0.0 0.0 0.0 0.0 17.45645105456937 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3807196863200844 [VS]AGHVDAAEK 3.8132 - 252 + 1 2.22 36810.8 1.0 27 2494 2522 SUDHL4_400M_050219_2,2523 SUDHL4_400M_050219_2,2523,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2525 10.325 9.8 5001100.0 25 0 463080.0 + 36075 SVQHVDAAEK 10 72 542.2754112544662 1082.5362695757324 2 542.2753784060478 MULTI CID FTMS 0 0 0 2524 5803832.5 0.726000285329849 15 -0.0650911331176757 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 70.32083430771065 0.0189262835408757 6 [VS]QHVDAAEK 10 0 + 111.86 0.0 0.0 10.334 10.334 93.562 0.0 0.0 0.0 88.91563799163855 16.264100213633768 16.264100213633768 9.164539485499247 0 2.7971062485323515 2.0 0.8807196863200843 0.7742275032520141 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAA[VS];[VS]QHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;[VS]AGHVD{[NV]|[RG]}[VS];[VS]QHVD[DV]GK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AWVHGA[PA];[VS]QHVD{[NV]|[RG]}[VS] 10.334;9.487;7.7509;6.8734;6.0939;5.6332;5.4287;5.2198;4.7449;4.5545 +;-;-;-;-;-;-;-;-;- + 748 + 1 2.22 46815.5 1.0 28 2495 2524 SUDHL4_400M_050219_2,2525 SUDHL4_400M_050219_2,2525,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2540 10.385 299.0 181010.0 25 0 31911.0 36968 TFEHLFIK 8 68 517.786906452289 1033.559259971378 2 517.7867309451103 MULTI CID FTMS 0 0 0 2539 159976.703125 0.1691231807029835 -44 0.2150611877441406 1 Unmodified _TFEHLFIK_ ENSG00000116678|ENST00000349533|LEPR 9.347437153973935 0.7675937258251505 6 K 1 7 15.797 0.0 0.0 1.5284 0.0 0.0 887.4534535522358 0.0 887.4534535522358 0.0 11.192803136799157 0.0 0.0 0 0.0 0.0 0.0 0.2302046884880938 + K 1.5284 + + 8 + 1 2.22 47486.1 1.0 29 2509 2539 SUDHL4_400M_050219_2,2540 SUDHL4_400M_050219_2,2540,TFEHLFIK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2545 10.402 22.0 1956500.0 25 0 347120.0 42842 VVLDNSGK 8 71 416.2323826886587 830.4502124441174 2 416.2320739626884 MULTI CID FTMS 0 0 0 2544 2807475.0 0.6703898808551959 -24 0.1142024993896484 1 Unmodified _VVLDNSGK_ ENSG00000116731|ENST00000311066|PRDM2;nc|ENSG00000116731|Q13029-2|PRDM2;nc|ENSG00000116731|Q13029-3|PRDM2;nc|ENSG00000116731|Q13029-5|PRDM2 16.942295170755138 0.6606234159769251 6 VVSPASS[KG] 9 4 + 67.985 0.0 0.0 8.1865 8.1865 96.965 0.0 0.0 0.0 47.39475399715565 6.144141363238646 6.144141363238646 24.006375246153908 0 0.7742275032520141 2.0 0.3252574989159953 0.2887254899964357 VVSPASS[KG];VVA[PS]SS[KG] 8.1865;5.2957 -;- 81 + 1 2.22 39226.2 1.0 30 2513 2544 SUDHL4_400M_050219_2,2545 SUDHL4_400M_050219_2,2545,VVLDNSGK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2552 10.438 800.0 66816.0 25 0 4691.7 + -1 ATCMRWQGQ 9 98 577.2471139168749 1152.4796749005498 2 577.2468749880791 MULTI CID FTMS 0 0 0 2551 82065.453125 0.5180119039822754 -29 0.1353235244750976 1 Carbamidomethyl (C),Oxidation (M) _ATC(Carbamidomethyl (C))M(Oxidation (M))RWQGQ_ REV__ENSG00000196821|ENST00000374023|ILRUN 13.90604991867851 0.4602628045680013 6 [AG]N[HN]EAQQ 9 -1 48.253 0.0 0.0 4.1869 0.0 0.0 0.0 200.0657704418185 200.0657704418185 40.76106631763196 0.0 0.0 0.0 0 0.75 2.0 0.3807196863200844 0.3054621874040891 [AG]N[HN]EAQQ 4.1869 - 259 1 2.22 44400.7 0.3600000143051147 31 2519 2551 SUDHL4_400M_050219_2,2552 SUDHL4_400M_050219_2,2552,ATCMRWQGQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2555 10.459 800.0 112310.0 25 0 69347.0 30418 RCCRRDWFS 9 40 614.7768532877961 0 614.7768432497978 PEAK CID FTMS 0 0 0 2554 147356.421875 0.2925645060117922 155 -0.8056716918945312 1 Unmodified _RCCRRDWFS_ ENST00000263377.6_1_19:15348671-15349019:-|nuORF 0.5247636613948944 0.3444685223463735 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 73468.2 0.4300000071525574 32 2521 2554 SUDHL4_400M_050219_2,2555 SUDHL4_400M_050219_2,2555,RCCRRDWFS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2584 10.572 45.0 859500.0 25 0 129080.0 + 36071 SVQHVDAAEK 10 77 361.8526702037637 1082.5361812114909 3 361.8523742556572 MULTI CID FTMS 0 0 0 2583 1129747.125 0.0789341976722754 71 -0.3730106353759765 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 33.4449034751529 0.2267874087365337 6 [VS]A{[CT]|[{M(Oxidation (M))|F}G]}AVH 8 7 36.59 0.0 0.0 3.3801 0.0 0.0 0.0 311.13863417463466 311.13863417463466 18.733806366653027 0.0 0.0 0.0 0 0.0 2.0 0.6747425010840047 0.0 [VS]A{[CT]|[{M(Oxidation (M))|F}G]}AVH 3.3801 - 179 1 2.22 37675.1 1.0 33 2549 2583 SUDHL4_400M_050219_2,2584 SUDHL4_400M_050219_2,2584,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2586 10.577 109.0 489570.0 25 0 42550.0 + 36076 SVQHVDAAEK 10 72 542.2754112544662 1082.5362695757324 2 542.2752563357353 MULTI CID FTMS 0 0 0 2585 631744.875 0.079024844274136 70 -0.36822509765625 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 74.09353968926766 0.0188047629662086 6 [VS]QHVDAAEK 10 0 + 119.43 0.0 0.0 11.033 11.033 93.658 0.0 0.0 0.0 97.98123137749307 18.081597033474424 18.081597033474424 9.164539485499247 0 3.221848749616356 2.0 0.8807196863200843 0.805462187404089 + + [VS]QHVDAAEK;[VS][AG]HVDAAEK;[VS]QHVADAEK;[VS][AG]HVADAEK;[VS]QHVD[DV]GK;[VS]AGHVDAAEK;[VS][AG]HVD[DV]GK;[VS]QHVAEEGK;[VS]AGHVDAAA[VS];[VS]AGHVD[DV]GK 11.033;10.186;10.138;9.2914;8.9409;8.8129;8.0943;8.0459;7.9697;7.402 +;-;-;-;-;-;-;-;-;- + 1074 + 1 2.22 50324.5 1.0 34 2550 2585 SUDHL4_400M_050219_2,2586 SUDHL4_400M_050219_2,2586,SVQHVDAAEK True True SVQHVDAAEK 10.576729 542.275256335735 545553360.0 2585.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 11.810298283894856 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2600 10.641 800.0 84325.0 25 0 5515.4 + 30449 RDSFSAEK 8 100 470.2304341558067 938.4463153784134 2 470.2304565310478 MULTI CID FTMS 0 0 0 2599 69195.8671875 0.1681426793766351 -36 0.1463794708251953 1 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 18.1463463914782 0.6428359029697936 6 HVDAAEK 7 -1 65.883 0.0 0.0 7.0204 0.0 0.0 170.06998396947546 0.0 170.06998396947546 0.0 35.24813245057537 0.0 0.0 0 2.5356668758921828 0.0 0.3807196863200844 0.3054621874040891 HVDAAEK 7.0204 - 230 + 1 2.22 56307.0 0.3700000047683716 35 2563 2599 SUDHL4_400M_050219_2,2600 SUDHL4_400M_050219_2,2600,RDSFSAEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2602 10.646 65.0 772890.0 25 0 138850.0 36969 TFEHLFIK 8 63 517.786906452289 1033.559259971378 2 517.7867919802666 MULTI CID FTMS 0 0 0 2601 885203.25 0.9358136921451722 11 -0.0458345413208007 1 Unmodified _TFEHLFIK_ ENSG00000116678|ENST00000349533|LEPR 5.230669730166228 0.792582437072536 6 KTRH[WP]K 7 6 19.965 0.0 0.0 1.9317 0.0 0.0 82.00952385755222 0.0 82.00952385755222 0.0 19.96539467890493 0.0 0.0 0 0.3182503180159344 0.0 0.3807196863200844 0.0 KTRH[WP]K 1.9317 - 15 + 1 2.22 43766.2 1.0 36 2564 2601 SUDHL4_400M_050219_2,2602 SUDHL4_400M_050219_2,2602,TFEHLFIK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2605 10.655 22.0 1638200.0 25 0 290720.0 + 42959 VVSPKSQS 8 55 416.2323826886587 830.4502124441174 2 416.2320739626884 MULTI CID FTMS 0 0 0 2604 2603328.5 0.6216422525372215 29 -0.1420888900756836 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 14.838274106304384 0.6917062315640577 6 VVSPASS[KG] 9 4 + 57.898 0.0 0.0 6.9718 6.9718 95.893 0.0 0.0 0.0 41.419497169889326 2.632192780232785 2.632192780232785 57.8976719887757 0 0.805462187404089 2.0 0.0 0.0 VVSPASS[KG] 6.9718 - 49 + 1 2.22 35197.6 1.0 37 2566 2604 SUDHL4_400M_050219_2,2605 SUDHL4_400M_050219_2,2605,VVSPKSQS False True VVSPKSQS 10.654987 416.232073962688 31499234.0 2604.0 ENST00000329099.4_3_17:292627-292744:-|nuORF 5.534152984619141 2.0 True 8.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2615 10.704 800.0 40226.0 25 0 2492.4 + -1 ADGEATMVISC 11 67 577.2471139168749 1152.4796749005498 2 577.2462646365166 MULTI CID FTMS 0 0 0 2614 88017.109375 0.555579828955705 27 -0.1611013412475586 1 Carbamidomethyl (C) _ADGEATMVISC(Carbamidomethyl (C))_ REV__ENSG00000174123|ENST00000308973|TLR10 8.155526934196011 0.8366696279279818 6 QAED 4 -1 24.68 0.0 0.0 2.1415 0.0 0.0 331.1495173921758 375.1419466608032 706.291464052979 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 QAED 2.1415 - 27 + 1 2.22 29777.4 0.3700000047683716 38 2575 2614 SUDHL4_400M_050219_2,2615 SUDHL4_400M_050219_2,2615,ADGEATMVISC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2634 10.788 800.0 130320.0 25 0 31118.0 + 12904 GYAENYYVSIR 11 54 667.8223621651101 1333.63017139702 2 667.8227416872978 MULTI CID FTMS 0 0 0 2633 91579.3203125 0.1659633068724279 -18 0.0846834182739257 1 Unmodified _GYAENYYVSIR_ REV__ENSG00000101162|ENST00000217133|TUBB1 4.5288652416199255 0.8537804541365391 6 TAM 3 -1 23.416 0.0 0.0 1.7558 0.0 0.0 1012.4852162091812 0.0 1012.4852162091812 0.0 3.6844000031671698 0.0 0.0 0 0.0 0.0 0.5 0.0 TAM 1.7558 - 13 1 2.22 76306.8 0.3499999940395355 39 2593 2633 SUDHL4_400M_050219_2,2634 SUDHL4_400M_050219_2,2634,GYAENYYVSIR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2637 10.797 41.0 929840.0 25 0 175610.0 + 28194 PQDESISFQQR 11 58 445.5509960898765 1333.6311588698295 3 445.5508911013603 MULTI CID FTMS 0 0 0 2636 889617.75 0.2724848338384126 -19 0.0887460708618164 1 Unmodified _PQDESISFQQR_ REV__ENSG00000169184|ENST00000302326|MN1 8.155526934196011 0.8366696279279818 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F} + + 33.351 12.932 1.9321 2.5008 2.5008 50.921 0.0 0.0 0.0 0.0 23.709901698124924 0.0 0.0 0 0.0 0.0 0.0 0.91944517631652 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 2.5008 - 100 + 1 2.22 36646.6 1.0 40 2595 2636 SUDHL4_400M_050219_2,2637 SUDHL4_400M_050219_2,2637,PQDESISFQQR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2638 10.802 291.0 202820.0 25 0 62910.0 36109 SVRSPTPYKK 10 75 388.2257882923776 1161.655535477333 3 388.2264282107353 MULTI CID FTMS 0 0 0 2636 89802.609375 0.2506458723393417 -32 0.1673212051391601 2 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 10.799506525563784 0.666336781075408 6 P{I|L}T{M(Oxidation (M))|F}KK 6 7 22.427 0.0 0.0 1.9306 0.0 0.0 429.2325085281248 0.0 429.2325085281248 0.0 13.690035853709375 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 P{I|L}T{M(Oxidation (M))|F}KK 1.9306 - 40 + 1 2.22 53971.2 1.0 41 2595 2636 SUDHL4_400M_050219_2,2638 SUDHL4_400M_050219_2,2638,SVRSPTPYKK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2639 10.816 758.0 123470.0 25 0 32618.0 -1 DKCEGRGG 8 93 439.6929756605834 877.3713983879669 2 439.6928283572197 MULTI CID FTMS 0 0 0 2636 105762.1328125 0.0899163536427461 -52 0.2493715286254882 3 Carbamidomethyl (C) _DKC(Carbamidomethyl (C))EGRGG_ ENSG00000086061|ENST00000330899|DNAJA1;nc|ENSG00000086061|P31689-2|DNAJA1 4.3292370932331545 0.7980541185046766 6 GM 2 -1 15.573 0.0 0.0 1.775 0.0 0.0 671.2993031232437 0.0 671.2993031232437 0.0 0.3460137548155906 0.0 0.0 0 0.0 0.0 0.0 0.0 GM 1.775 - 43 1 2.22 79239.3 1.0 42 2595 2636 SUDHL4_400M_050219_2,2639 SUDHL4_400M_050219_2,2639,DKCEGRGG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2642 10.825 152.0 291890.0 25 0 42833.0 + 36072 SVQHVDAAEK 10 80 361.8526702037637 1082.5361812114909 3 361.8523742556572 MULTI CID FTMS 0 0 0 2641 358966.0625 0.025080566710903 119 -0.6309480667114258 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 30.7034409873982 0.2788461460996952 6 HVDAAEK 7 3 37.995 0.0 0.0 3.5099 0.0 0.0 314.1606920794838 0.0 314.1606920794838 0.0 7.291009840832174 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.3054621874040891 + HVDAAEK 3.5099 + + 311 + 1 2.22 42468.3 1.0 43 2597 2641 SUDHL4_400M_050219_2,2642 SUDHL4_400M_050219_2,2642,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2644 10.836 463.0 144650.0 25 0 10952.0 + 36077 SVQHVDAAEK 10 81 542.2754112544662 1082.5362695757324 2 542.2754394412041 MULTI CID FTMS 0 0 0 2643 185580.5 0.023214228865436 118 -0.6253900527954102 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 62.89396527753397 0.0289947886078699 6 [VS]AGHVDAAEK 11 2 + 99.621 0.0 0.0 9.2026 9.2026 90.821 0.0 0.0 0.0 8.807748267658269 8.807748267658269 8.807748267658269 6.307748267658269 0 2.897940008672037 2.0 0.2742275032520141 0.0 [VS]AGHVDAAEK;[VS]QHVDAAEK;[VS]AGHVD[DV]GK;[VS][AG]HVDAAEK;[VS]QHVADAEK;[VS]QHVD[DV]GK;[VS]AGHA[DV]AEK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS][AG]HVADAEK;[VS]QHA[DV]AEK 9.2026;8.6199;7.659;7.5424;7.4404;7.0763;6.7105;6.6333;6.5938;6.1278 -;+;-;-;-;-;-;-;-;- + 1694 1 2.22 54563.0 1.0 44 2598 2643 SUDHL4_400M_050219_2,2644 SUDHL4_400M_050219_2,2644,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2653 10.874 406.0 146470.0 25 0 6231.3 + -1 SQKPVMVKR 9 99 363.5463354081424 1087.6171768246272 3 363.5462524294853 MULTI CID FTMS 0 0 0 2652 159586.453125 0.8985248615707873 -6 0.0242109298706054 1 Oxidation (M) _SQKPVM(Oxidation (M))VKR_ ENSG00000108107|ENST00000344063|RPL28;ENST00000560583.5_1_19:55899571-55899697:+|nuORF;ENST00000412461.2_1_22:19043875-19044022:+|nuORF 15.738622578938676 0.4106572216562794 6 {[QS]|[NT]}KPV{M(Oxidation (M))|F}VKR 9 -1 {[QS]|[NT]} + + 33.893 8.6276 4.0112 3.1163 3.1163 51.765 0.0 0.0 0.0 0.0 22.11055836485718 0.0 0.0 0 0.5 0.0 0.0 0.0 {[QS]|[NT]}KPV{M(Oxidation (M))|F}VKR 3.1163 + + 55 + 1 2.22 57309.3 1.0 45 2606 2652 SUDHL4_400M_050219_2,2653 SUDHL4_400M_050219_2,2653,SQKPVMVKR False False SQKPVMVKR 10.874147 363.5457 714594.625 2652.0 ENSG00000108107|ENST00000344063|RPL28;;ENST00000560583.5_1_19:55899571-55899697:+|nuORF;;ENST00000412461.2_1_22:19043875-19044022:+|nuORF 4.457804759343465 3.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2656 10.884 205.0 219250.0 25 0 19780.0 + 30450 RDSFSAEK 8 70 470.2304341558067 938.4463153784134 2 470.2302123904228 MULTI CID FTMS 0 0 0 2655 257015.015625 0.6245343128674876 9 -0.050053596496582 1 Unmodified _RDSFSAEK_ REV__ENSG00000101825|ENST00000217939|MXRA5 14.838274106304384 0.6917062315640577 6 HVDAAEK 7 -1 62.828 0.0 0.0 6.6949 0.0 0.0 170.0696934903488 0.0 170.0696934903488 0.0 58.84897306502516 0.0 0.0 0 2.2302046884880937 0.0 0.3807196863200844 0.3054621874040891 HVDAAEK 6.6949 - 135 + 1 2.22 40494.5 1.0 46 2608 2655 SUDHL4_400M_050219_2,2656 SUDHL4_400M_050219_2,2656,RDSFSAEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2657 10.894 521.0 137710.0 25 0 24991.0 10799 FYQQTLPGSHI 11 45 430.8881109145006 0 430.8881713747978 PEAK CID FTMS 0 0 0 2655 167306.359375 0.7224022334571542 -79 0.3913211822509765 2 Unmodified _FYQQTLPGSHI_ ENSG00000116127|ENST00000613296|ALMS1;nc|ENSG00000116127|Q8TCU4-2|ALMS1;nc|ENSG00000116127|Q8TCU4-3|ALMS1 1.1933415558491238 0.4761840153648598 6 {M(Oxidation (M))|F} 1 10 0.088644 0.0 0.0 0.01031 0.0 0.0 501.7411320878956 207.9237002008422 709.6648322887378 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.01031 + + 1 + 1 2.22 65363.1 1.0 47 2608 2655 SUDHL4_400M_050219_2,2657 SUDHL4_400M_050219_2,2657,FYQQTLPGSHI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2661 10.908 189.0 234780.0 25 0 35392.0 + 42960 VVSPKSQS 8 66 416.2323826886587 830.4502124441174 2 416.2319824099541 MULTI CID FTMS 0 0 0 2660 292444.375 0.0698320553924869 74 -0.3821535110473633 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 14.838274106304384 0.6917062315640577 6 VVSPAS 6 3 46.616 0.0 0.0 5.6134 0.0 0.0 0.0 287.1362398736938 287.1362398736938 28.86931783443302 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 VVSPAS 5.6134 - 91 + 1 2.22 40361.1 1.0 48 2611 2660 SUDHL4_400M_050219_2,2661 SUDHL4_400M_050219_2,2661,VVSPKSQS False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2692 11.039 703.0 212150.0 25 0 52503.0 10718 FWTSFIFCQR 10 72 667.8223621651101 1333.63017139702 2 667.8229858279228 MULTI CID FTMS 0 0 0 2691 190480.0 0.34519464203476 30 -0.1909027099609375 1 Unmodified _FWTSFIFCQR_ ENST00000299505.6_1_19:34791118-34791184:+|nuORF 5.296884461304476 0.7021353017287152 6 R 1 9 20.797 0.0 0.0 1.5594 0.0 0.0 1159.5181546507297 0.0 1159.5181546507297 0.0 3.718553028398688 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + R 1.5594 + + 22 + 1 2.22 110376.5 1.0 49 2641 2691 SUDHL4_400M_050219_2,2692 SUDHL4_400M_050219_2,2692,FWTSFIFCQR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2695 11.048 34.0 957350.0 25 0 171860.0 + 28195 PQDESISFQQR 11 59 445.5509960898765 1333.6311588698295 3 445.5508911013603 MULTI CID FTMS 0 0 0 2694 1033164.125 0.3164522683235962 29 -0.1761369705200195 1 Unmodified _PQDESISFQQR_ REV__ENSG00000169184|ENST00000302326|MN1 4.897010918128616 0.8520435188433833 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F} + + 24.425 14.693 2.1952 1.8314 1.8314 50.247 0.0 0.0 0.0 0.0 14.247425010840043 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 1.8314 - 75 + 1 2.22 32444.1 1.0 50 2643 2694 SUDHL4_400M_050219_2,2695 SUDHL4_400M_050219_2,2695,PQDESISFQQR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2697 11.055 241.0 249610.0 25 0 66772.0 + 43021 VWLQLPFFL 9 75 388.2257882923776 1161.655535477333 3 388.2261230349541 MULTI CID FTMS 0 0 0 2696 235773.671875 0.658062143996126 17 -0.1199779510498046 1 Unmodified _VWLQLPFFL_ REV__nc|ENSG00000132692|Q96GW7-2|BCAN 8.593279151180031 0.6146971463335029 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 10 -1 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AT + + 23.461 9.1567 2.1333 2.0196 2.0196 50.404 0.0 0.0 0.0 0.0 14.304009240123888 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}ATP{I|L}T{M(Oxidation (M))|F}KK 2.0196 - 63 + 1 2.22 58992.4 1.0 51 2644 2696 SUDHL4_400M_050219_2,2697 SUDHL4_400M_050219_2,2697,VWLQLPFFL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2698 11.069 800.0 76225.0 25 0 9903.3 + -1 PGPTLPPRG 9 82 467.2630703026915 932.511587672183 2 467.2626830935478 MULTI CID FTMS 0 0 0 2696 104341.7265625 0.6500595364064736 -28 0.1239824295043945 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))PGPTLPPRG_ REV__ENST00000593685.5_2_19:40316066-40316243:-|nuORF 20.453626601364224 0.2830276176381075 6 T{M(Oxidation (M))|F}K 3 -1 29.926 0.0 0.0 3.2092 0.0 0.0 538.32376526183 0.0 538.32376526183 0.0 11.4173174197796 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.2887254899964357 T{M(Oxidation (M))|F}K 3.2092 - 60 + 1 2.22 52531.5 0.4199999868869781 52 2644 2696 SUDHL4_400M_050219_2,2698 SUDHL4_400M_050219_2,2698,PGPTLPPRG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2700 11.074 56.0 951550.0 25 0 247380.0 + 11945 GMRENQGS 8 62 439.6929756605834 877.3713983879669 2 439.6928588747978 MULTI CID FTMS 0 0 0 2699 1085888.875 0.9231959067459712 -2 0.0256481170654296 1 Unmodified _GMRENQGS_ REV__ENSG00000138592|ENST00000307179|USP8;REV__nc|ENSG00000138592|P40818-2|USP8 2.059750862983233 0.8118298629782807 6 GM 2 -1 13.812 0.0 0.0 1.5743 0.0 0.0 671.2993031232437 0.0 671.2993031232437 0.0 6.822581265925438 0.0 0.0 0 0.0 0.0 0.0 0.0 GM 1.5743 + + 3 1 2.22 44826.1 1.0 53 2645 2699 SUDHL4_400M_050219_2,2700 SUDHL4_400M_050219_2,2700,GMRENQGS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2702 11.081 268.0 180010.0 25 0 23044.0 + 36073 SVQHVDAAEK 10 83 361.8526702037637 1082.5361812114909 3 361.8524047732353 MULTI CID FTMS 0 0 0 2701 217290.15625 0.0151818258848652 168 -0.8388833999633789 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 24.881564428377168 0.4096545554397951 6 HVDAAEK 7 3 31.878 0.0 0.0 2.9447 0.0 0.0 314.15933006257166 0.0 314.15933006257166 0.0 10.962695236253026 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.3252574989159953 + HVDAAEK 2.9447 + + 273 + 1 2.22 43847.3 1.0 54 2646 2701 SUDHL4_400M_050219_2,2702 SUDHL4_400M_050219_2,2702,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2704 11.098 800.0 77673.0 25 0 6189.9 + 36078 SVQHVDAAEK 10 89 542.2754112544662 1082.5362695757324 2 542.2750121951103 MULTI CID FTMS 0 0 0 2703 119269.9609375 0.0149194563543839 167 -0.8313837051391602 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 78.11562728322046 0.0186121335515026 6 [VS]QHVDAAEK 10 0 + 96.112 0.0 0.0 8.8784 8.8784 87.172 0.0 0.0 0.0 2.6974017106616373 2.6974017106616373 2.6974017106616373 2.6974017106616373 0 3.2034021960761265 2.0 0.7742275032520141 0.7742275032520141 + + [VS]QHVDAAEK;[VS]AGHVDAAEK;[VS][AG]HVDAAEK;[VS]AGHVDAAA[VS];[VS]AGHVD[DV]GK;[VS]QHVDAAA[VS];[VS]QHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAEK;[VS]Q{[MS]|[{M(Oxidation (M))|F}A]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EK;{[CT]|[{M(Oxidation (M))|F}G]}AAADVS{[MS]|[{M(Oxidation (M))|F}A]}K 8.8784;8.6293;8.0319;7.1156;6.9873;6.8748;6.7499;6.615;6.5477;5.3972 +;-;-;-;-;-;-;-;-;- + 892 + 1 2.22 54338.1 0.4000000059604645 55 2647 2703 SUDHL4_400M_050219_2,2704 SUDHL4_400M_050219_2,2704,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2714 11.142 568.0 110960.0 25 0 9353.9 -1 0 85 470.23048652132 469.22321005472 1 470.2303954958916 MULTI CID FTMS 0 0 0 2713 152368.546875 0.8716755570552888 5 -0.0382928848266601 1 6 AAEK 4 -1 21.82 0.0 0.0 4.6503 0.0 0.0 52.00058166800461 0.0 52.00058166800461 0.0 1.5297835213984534 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.2887254899964357 AAEK 4.6503 - 39 + 1 2.22 56570.2 1.0 56 2656 2713 SUDHL4_400M_050219_2,2714 SUDHL4_400M_050219_2,2714, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 2719 11.168 634.0 102060.0 25 0 12457.0 + 42961 VVSPKSQS 8 101 416.2323826886587 830.4502124441174 2 416.2316467165947 MULTI CID FTMS 0 0 0 2718 79619.140625 0.0190120539621499 123 -0.6182193756103516 1 Unmodified _VVSPKSQS_ ENST00000329099.4_3_17:292627-292744:-|nuORF 14.838274106304384 0.6917062315640577 6 VVSE{I|L}{[RE]|[WV]} 7 5 + 47.051 0.0 0.0 5.6657 5.6657 91.954 0.0 0.0 0.0 32.063586933191566 3.282957030980711 3.282957030980711 47.05091642286526 0 0.805462187404089 2.0 0.0 0.0 VVSE{I|L}{[RE]|[WV]} 5.6657 - 113 + 1 2.22 53588.0 1.0 57 2660 2718 SUDHL4_400M_050219_2,2719 SUDHL4_400M_050219_2,2719,VVSPKSQS False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2723 11.187 486.0 205340.0 25 0 31328.0 16668 KEMVQEDQKR 10 51 430.8881109145006 0 430.8882324099541 PEAK CID FTMS 0 0 0 2722 188912.171875 0.8156926933294689 -24 0.1596498489379882 1 Unmodified _KEMVQEDQKR_ ENSG00000100083|ENST00000343632|GGA1;nc|ENSG00000100083|Q9UJY5-2|GGA1;nc|ENSG00000100083|Q9UJY5-3|GGA1;nc|ENSG00000100083|Q9UJY5-4|GGA1;nc|ENSG00000100083|Q9UJY5-6|GGA1 2.735195868890462 0.3961065659209837 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 88317.1 1.0 58 2663 2722 SUDHL4_400M_050219_2,2723 SUDHL4_400M_050219_2,2723,KEMVQEDQKR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2733 11.236 800.0 48776.0 25 0 5050.0 + -1 LEGEESRMSGE 11 57 620.2613914001761 1238.508229867152 2 620.2616454958916 MULTI CID FTMS 0 0 0 2732 46596.1796875 0.5400735599061024 13 -0.0645675659179687 1 Oxidation (M) _LEGEESRM(Oxidation (M))SGE_ ENSG00000167768|ENST00000252244|KRT1;P04264;ENSG00000189182|ENST00000341809|KRT77;Q7Z794;ENSEMBL:ENSBTAP00000038253 34.221707139014875 0.3014076866608453 6 {I|L}EWES 5 -1 62.519 0.0 0.0 5.0479 0.0 0.0 0.0 591.2186373346311 591.2186373346311 37.99803764475705 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {I|L}EWES 5.0479 - 96 + 1 2.22 38547.2 0.3400000035762787 59 2672 2732 SUDHL4_400M_050219_2,2733 SUDHL4_400M_050219_2,2733,LEGEESRMSGE False False LEGEESRMSGE 11.235742 620.261645495892 431843.46875 2732.0 ENSG00000167768|ENST00000252244|KRT1;;P04264;;ENSG00000189182|ENST00000341809|KRT77;;Q7Z794;;ENSEMBL:ENSBTAP00000038253 7.496832688649495 2.0 True 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2756 11.326 141.0 378770.0 25 0 99418.0 -1 DSLGGNCR 8 63 439.6929756605834 877.3713983879669 2 439.6928588747978 MULTI CID FTMS 0 0 0 2755 418768.625 0.3560267439646055 47 -0.2433910369873047 1 Carbamidomethyl (C) _DSLGGNC(Carbamidomethyl (C))R_ ENSG00000155980|ENST00000455537|KIF5A;ENSG00000168280|ENST00000435030|KIF5C;ENSG00000170759|ENST00000302418|KIF5B;ENSG00000186185|ENST00000593135|KIF18B;nc|ENSG00000168280|O60282-2|KIF5C;nc|ENSG00000186185|Q86Y91-6|KIF18B 2.059750862983233 0.8118298629782807 6 D 1 -1 6.9897 0.0 0.0 0.79666 0.0 0.0 63.99917967657661 695.3224427501526 759.3216224267293 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.79666 + + 2 + 1 2.22 50116.5 1.0 60 2694 2755 SUDHL4_400M_050219_2,2756 SUDHL4_400M_050219_2,2756,DSLGGNCR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2758 11.336 430.0 118450.0 25 0 12611.0 + 36079 SVQHVDAAEK 10 89 361.8526952493438 1082.5362563482315 3 361.8520690798759 MULTI CID FTMS 0 0 0 2757 146014.609375 0.3082163158616178 -20 0.0818042755126953 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 24.881564428377168 0.4096545554397951 6 [VS]AG{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK 11 6 + 41.536 0.0 0.0 3.837 3.837 79.403 0.0 0.0 0.0 8.287793280423692 8.584461116955303 8.287793280423692 8.287793280423692 0 0.5924778212679485 2.0 0.2134679910804404 0.0 [VS]AG{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK;[{I|L}T]{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]}E{M(Oxidation (M))|F}GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK;{[TV]|[{I|L}S]}GG{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK;{[TV]|[{I|L}S]}N{M(Oxidation (M))|F}AAE{M(Oxidation (M))|F}GK;[WK]HVA[C(Carbamidomethyl (C))S][VP];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AV[{M(Oxidation (M))|F}T]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}G{M(Oxidation (M))|F}AA[Y{I|L}]GK;{[ET]|[MV]}MT[RN]{M(Oxidation (M))|F}GK;[WK]HVA{[CT]|[{M(Oxidation (M))|F}G]}A[PA] 3.837;3.0714;2.2635;1.6897;1.6657;1.1401;1.0875;0.80946;0.67868;0.6375 -;-;-;-;-;-;-;-;-;- 258 1 2.22 46876.4 1.0 61 2695 2757 SUDHL4_400M_050219_2,2758 SUDHL4_400M_050219_2,2758,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2768 11.384 800.0 64576.0 25 0 11919.0 + 8149 EPLSAVRPQ 9 66 498.7775706635006 995.5405883938012 2 498.7771789431572 MULTI CID FTMS 0 0 0 2767 90207.390625 0.7713349261655084 -1 0.0040626525878906 1 Unmodified _EPLSAVRPQ_ REV__ENST00000531526.5_1_11:45944386-45945084:+|nuORF 20.453626601364224 0.2830276176381075 6 [EP]{I|L}[{I|L}P]WKN 8 -1 + 45.952 0.0 0.0 4.6158 4.6158 87.28 0.0 0.0 0.0 3.568781008931481 1.4806253545543768 1.4806253545543768 23.05707240970889 0 0.3054621874040891 1.5228787452803376 0.3054621874040891 0.0 [EP]{I|L}[{I|L}P]WKN;[EP]{I|L}{[SA]|[TG]}[RV][QP];[TP][W{I|L}]AA{I|L}[QP] 4.6158;2.2998;1.5421 -;+;- + 93 1 2.22 44796.7 0.3799999952316284 62 2704 2767 SUDHL4_400M_050219_2,2768 SUDHL4_400M_050219_2,2768,EPLSAVRPQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2769 11.398 800.0 78921.0 25 0 6273.6 + 36081 SVQHVDAAEK 10 93 542.2754978428025 1082.5364427524048 2 542.2750121951103 MULTI CID FTMS 0 0 0 2767 102445.4921875 0.6151663742289792 -13 0.0599040985107421 2 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 52.19289622718417 0.0672803650928222 6 [VS]AGHVDAAA[VS] 12 5 + 80.025 0.0 0.0 7.3924 7.3924 87.967 0.0 0.0 0.0 11.444474089518408 46.040937697618745 11.444474089518408 5.335451908949651 0 2.7302046884880937 2.0 0.3494850021680094 0.0 [VS]AGHVDAAA[VS];[VS]QHVDAAA[VS];[VS]AGHVD[DV]GK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVDAAA[VS];[VS]QHVD[DV]GK;[VS]AGHVD{[NV]|[RG]}[VS];[VS]AG{[MS]|[{M(Oxidation (M))|F}A]}V[{M(Oxidation (M))|F}T]GK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AADK{M(Oxidation (M))|F}EK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GHVWAA[VS];[VS]QHVD{[NV]|[RG]}[VS] 7.3924;6.8995;5.7118;5.3749;5.2222;5.1397;4.6826;4.6602;4.6531;4.6502 -;-;-;-;-;-;-;-;-;- 837 1 2.22 55071.6 0.4000000059604645 63 2704 2767 SUDHL4_400M_050219_2,2769 SUDHL4_400M_050219_2,2769,SVQHVDAAEK True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2774 11.422 507.0 182850.0 25 0 60858.0 27678 PLIFYVPGRT 10 97 388.2256579421686 1161.655144426706 3 388.2264587283134 MULTI CID FTMS 0 0 0 2773 77022.734375 0.3282202768008501 -14 0.0899419784545898 1 Unmodified _PLIFYVPGRT_ ENSG00000010404|ENST00000340855|IDS 13.90604991867851 0.6142120002215601 6 P{I|L} 2 8 19.024 0.0 0.0 1.6376 0.0 0.0 429.2365786081496 519.2609928048626 948.497571413012 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + P{I|L} 1.6376 + + 84 + 1 2.22 78415.8 1.0 64 2708 2773 SUDHL4_400M_050219_2,2774 SUDHL4_400M_050219_2,2774,PLIFYVPGRT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2782 11.451 47.0 861030.0 25 0 107790.0 + 12190 GQRKPATSY 9 81 504.2671936403722 1006.5198343475444 2 504.2670471072197 MULTI CID FTMS 0 0 0 2781 1204032.625 0.8536997513330056 -14 0.0899162292480468 1 Unmodified _GQRKPATSY_ ENSG00000108107|ENST00000344063|RPL28;nc|ENSG00000108107|P46779-2|RPL28;nc|ENSG00000108107|P46779-3|RPL28 47.74868867922204 0.0453060283459952 6 {[QG]|[NA]}RK[PA]TSY 9 0 + 46.281 0.0 0.0 4.5981 4.5981 88.147 0.0 0.0 0.0 2.4641694110709267 35.59492461138943 2.4641694110709267 46.28128696979955 0 1.2887254899964358 0.0 0.7742275032520141 0.0 + + {[QG]|[NA]}RK[PA]TSY 4.5981 + + 33 1 2.22 38416.3 1.0 65 2715 2781 SUDHL4_400M_050219_2,2782 SUDHL4_400M_050219_2,2782,GQRKPATSY True True GQRKPATSY 11.450701 504.26704710722 5920942.0 2781.0 ENSG00000108107|ENST00000344063|RPL28;;nc|ENSG00000108107|P46779-2|RPL28;;nc|ENSG00000108107|P46779-3|RPL28 6.570025285085042 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2800 11.532 800.0 72717.0 25 0 8211.2 + 34871 SQGFSHSQM 9 102 512.7112290730672 1023.4079052129345 2 512.7110473513603 MULTI CID FTMS 0 0 0 2799 91800.96875 0.0307419459379451 -49 0.2391357421875 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 93.16586880292088 0.0136995152735431 6 {[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F} 9 0 + 75.952 0.0 0.0 7.4215 7.4215 88.569 0.0 0.0 0.0 6.123956595632549 6.123956595632549 6.123956595632549 6.123956595632549 0 1.424742501084005 1.3010299956639813 0.3807196863200844 0.805462187404089 + + {[QS]|[NT]}G{M(Oxidation (M))|F}SHSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{M(Oxidation (M))|F}SHS[AG]{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}Q{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]SW{[QS]|[NT]};{[QS]|[NT]}[YQ]HSQ{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F} 7.4215;6.8231;5.9234;5.7347;5.7281;5.5196;5.206;4.8561;4.8284;4.6146 +;-;-;-;-;-;-;-;-;- + 452 + 1 2.22 49869.9 0.3700000047683716 66 2732 2799 SUDHL4_400M_050219_2,2800 SUDHL4_400M_050219_2,2800,SQGFSHSQM True False SQGFSHSQM 11.531513 512.71104735136 51695772.0 2799.0 ENSG00000181143|ENST00000397910|MUC16 10.387517293294271 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2814 11.589 383.0 130190.0 25 0 14683.0 + 36080 SVQHVDAAEK 10 90 361.8526952493438 1082.5362563482315 3 361.8521911501884 MULTI CID FTMS 0 0 0 2813 118512.6796875 0.2501636080973096 30 -0.1598453521728515 1 Unmodified _SVQHVDAAEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 24.881564428377168 0.4096545554397951 6 HVDAAEK 7 3 31.513 0.0 0.0 2.911 0.0 0.0 314.16020825228526 0.0 314.16020825228526 0.0 16.495630496166946 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.2887254899964357 + HVDAAEK 2.911 + + 275 + 1 2.22 46651.2 1.0 67 2745 2813 SUDHL4_400M_050219_2,2814 SUDHL4_400M_050219_2,2814,SVQHVDAAEK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2819 11.618 800.0 68200.0 25 0 4209.1 + 42276 VSQHTPEPIF 10 81 577.7936562206668 1153.5727595081337 2 577.7933227419853 MULTI CID FTMS 0 0 0 2818 72093.09375 0.6098931679248526 -1 0.0040607452392578 1 Unmodified _VSQHTPEPIF_ REV__ENSG00000221843|ENST00000447166|C2orf16 24.99096001346401 0.4071966087057876 6 [VS]QHVDAAAEK 11 -1 + 114.64 0.0 0.0 9.9377 9.9377 93.303 0.0 0.0 0.0 87.8054721835384 16.452728135102475 16.452728135102475 9.128498242810991 0 2.809894379144197 2.0 0.7742275032520141 0.7887254899964358 [VS]QHVDAAAEK;[VS][AG]HVDAAAEK;WQHVWAAEK;W[AG]HVWAAEK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AAEK;[VS]Q{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{M(Oxidation (M))|F}AEK;[VS][AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}AAEK;[VS]AGHVD[VG]EGK;[VS][AG]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{M(Oxidation (M))|F}AEK;[VS]QHVD[VG]EGK 9.9377;9.1463;8.3249;7.5266;6.6758;6.3308;5.8813;5.5678;5.5364;5.2285 -;-;-;-;-;-;-;-;-;- 925 + 1 2.22 45735.1 0.3899999856948852 68 2749 2818 SUDHL4_400M_050219_2,2819 SUDHL4_400M_050219_2,2819,VSQHTPEPIF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2820 11.632 800.0 72915.0 25 0 18270.0 -1 VGPSCLDM 8 70 439.6929093087895 877.3712656843791 2 439.6924926638603 MULTI CID FTMS 0 0 0 2818 89775.3046875 0.970270290352264 -8 0.0378246307373046 2 Carbamidomethyl (C) _VGPSC(Carbamidomethyl (C))LDM_ ENSG00000110777|ENST00000393067|POU2AF1 5.230669730166228 0.792582437072536 6 GM 2 -1 15.573 0.0 0.0 1.775 0.0 0.0 671.29594618965 0.0 671.29594618965 0.0 0.0886438348021556 0.0 0.0 0 0.0 0.0 0.0 0.0 GM 1.775 - 16 1 2.22 55039.4 0.3799999952316284 69 2749 2818 SUDHL4_400M_050219_2,2820 SUDHL4_400M_050219_2,2820,VGPSCLDM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2833 11.687 503.0 136440.0 25 0 53941.0 36110 SVRSPTPYKK 10 77 388.2256579421686 1161.655144426706 3 388.2263366580009 MULTI CID FTMS 0 0 0 2832 39963.75390625 0.1702992561293424 39 -0.1803703308105468 1 Unmodified _SVRSPTPYKK_ ENSG00000115020|ENST00000264380|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE;nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE 7.608950283845883 0.6914406445242895 6 T 1 9 13.539 0.0 0.0 1.1655 0.0 0.0 732.4213129125961 325.16232759266444 1057.5836405052603 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3054621874040891 0.0 + T 1.1655 + + 23 + 1 2.22 62104.0 1.0 70 2761 2832 SUDHL4_400M_050219_2,2833 SUDHL4_400M_050219_2,2833,SVRSPTPYKK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2855 11.773 20.0 1575900.0 25 0 205970.0 + 34872 SQGFSHSQM 9 68 512.7112290730672 1023.4079052129345 2 512.7113525271416 MULTI CID FTMS 0 0 0 2854 2770222.0 0.927681005110376 1 -0.0047903060913085 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 51.629811660486645 0.0367964933207742 6 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 4 + 59.753 0.0 0.0 5.8386 5.8386 84.54 0.0 0.0 0.0 26.267186419914097 45.149087242336776 26.267186419914097 6.478174818886373 0 0.7742275032520141 1.3010299956639813 0.5866968715561641 0.6989700043360187 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};[HS][YQ]QTN{M(Oxidation (M))|F};[HS][YQ][AG]TN{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}[DP][C(Carbamidomethyl (C))R]N{M(Oxidation (M))|F} 5.8386;5.2056;4.9389;4.3006;3.1751;3.1603;2.2553;0.1411 -;-;-;-;-;-;-;- 86 1 2.22 32359.3 1.0 71 2782 2854 SUDHL4_400M_050219_2,2855 SUDHL4_400M_050219_2,2855,SQGFSHSQM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2865 11.821 800.0 100530.0 25 0 8695.6 + 35719 SVHEEVQEK 9 96 542.7672813673304 1083.520009801461 2 542.7668334841728 MULTI CID FTMS 0 0 0 2864 73417.7265625 0.2083744244545261 -18 0.0731229782104492 1 Unmodified _SVHEEVQEK_ REV__ENSG00000141013|ENST00000268699|GAS8;REV__nc|ENSG00000141013|O95995-2|GAS8 41.95555342248728 0.0647214845423414 6 [VS]EHVDAAEK 10 -1 + 104.21 0.0 0.0 9.6174 9.6174 98.434 0.0 0.0 0.0 13.617646881713767 13.617646881713767 13.617646881713767 27.02961137805308 0 3.159379381312206 2.0 1.274227503252014 0.3494850021680094 [VS]EHVDAAEK;[VS]EHVDAAA[VS];{[YC]|[HE]}VSVDAAEK;[HV]ESVDAAEK;W{M(Oxidation (M))|F}[W{M(Oxidation (M))|F}]AAEK;{[YC]|[HE]}VSVDAAA[VS];[HV]DTVDAAEK;{[CT]|[{M(Oxidation (M))|F}G]}KEE{M(Oxidation (M))|F}AEK;[HV]ESVDAAA[VS];{[CT]|[{M(Oxidation (M))|F}G]}{M(Oxidation (M))|F}TVDAAEK 9.6174;7.1228;6.9839;6.2523;6.1082;5.7461;5.53;5.2669;5.0145;4.9463 -;-;-;-;-;-;-;-;-;- 1361 + 1 2.22 64172.7 0.3799999952316284 72 2791 2864 SUDHL4_400M_050219_2,2865 SUDHL4_400M_050219_2,2865,SVHEEVQEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2870 11.84 232.0 230800.0 25 0 23838.0 + 30713 RGFMMVSEK 9 99 362.1806529178526 1083.520129353758 3 362.1806518435478 MULTI CID FTMS 0 0 0 2869 206593.3125 0.4997731700843357 -18 0.0854511260986328 1 Unmodified _RGFMMVSEK_ REV__ENSG00000068784|ENST00000263736|SRBD1;REV__nc|ENSG00000068784|Q8N5C6-2|SRBD1 19.256988751693697 0.3154191944385105 6 HVDAAEK 7 -1 35.632 0.0 0.0 3.2885 0.0 0.0 315.14317887848955 0.0 315.14317887848955 0.0 12.16419380074597 0.0 0.0 0 0.3807196863200844 0.0 0.3054621874040891 0.2887254899964357 HVDAAEK 3.2885 - 166 + 1 2.22 49309.3 1.0 73 2795 2869 SUDHL4_400M_050219_2,2870 SUDHL4_400M_050219_2,2870,RGFMMVSEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 2904 11.977 299.0 355880.0 25 0 272360.0 -1 VWQCNCKFHW 10 47 488.8802261483044 0 488.8802368044853 PEAK CID FTMS 0 0 0 2903 295464.21875 0.8021323388493115 -26 0.1045360565185546 1 2 Carbamidomethyl (C) _VWQC(Carbamidomethyl (C))NC(Carbamidomethyl (C))KFHW_ ENSG00000154764|ENST00000285018|WNT7A;ENSG00000188064|ENST00000339464|WNT7B 0.1593219195374162 0.3961065659209837 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 86093.6 1.0 74 2828 2903 SUDHL4_400M_050219_2,2904 SUDHL4_400M_050219_2,2904,VWQCNCKFHW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2917 12.026 82.0 386780.0 25 0 50316.0 -1 SQGFSHSQM 9 62 512.7112290730672 1023.4079052129345 2 512.7112914919853 MULTI CID FTMS 0 0 0 2916 743874.5625 0.2491057762937559 59 -0.3178052902221679 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 33.4449034751529 0.1114409586740657 6 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F} 9 -1 + 45.366 0.0 0.0 4.4328 4.4328 81.595 0.0 0.0 0.0 13.142492736872596 29.881062318217104 13.142492736872596 8.978174818886373 0 1.242992819099939 0.0 0.3807196863200844 0.5994850021680094 {[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HTN{M(Oxidation (M))|F};[HS][YQ]QTN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};[HS][YQ][AG]TN{M(Oxidation (M))|F} 4.4328;3.5555;3.533;2.6505;2.5272;2.0425;1.9357;1.1374 -;-;-;-;-;-;-;- 76 1 2.22 31001.0 1.0 75 2840 2916 SUDHL4_400M_050219_2,2917 SUDHL4_400M_050219_2,2917,SQGFSHSQM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2922 12.055 800.0 41571.0 25 0 3512.7 + 6246 DTNADKQLS 9 81 496.2385029102056 990.4624528872112 2 496.2378417849541 MULTI CID FTMS 0 0 0 2921 73201.25 0.8432247540411479 1 -0.0163688659667968 1 Unmodified _DTNADKQLS_ ENSG00000163220|ENST00000368738|S100A9 45.69961567697781 0.0497987121815769 6 {[ES]|[DT]|[{I|L}C]}NA 4 5 23.984 0.0 0.0 2.4215 0.0 0.0 0.0 586.285120694105 586.285120694105 3.138429459400048 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.805462187404089 0.0 + {[ES]|[DT]|[{I|L}C]}NA 2.4215 + + 44 1 2.22 28969.2 0.3700000047683716 76 2844 2921 SUDHL4_400M_050219_2,2922 SUDHL4_400M_050219_2,2922,DTNADKQLS True True DTNADKQLS 12.054522 496.237841784954 828512.625 2921.0 ENSG00000163220|ENST00000368738|S100A9 4.335217237472534 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2927 12.083 800.0 79424.0 25 0 6395.5 + + 35720 SVQHVDAAEK 10 88 542.7672813673304 1083.520009801461 2 542.7667114138603 MULTI CID FTMS 0 0 0 2926 79750.7890625 0.2263489425342795 39 -0.224217414855957 1 Unmodified _SVHEEVQEK_ ENST00000585682.5_1_4:159092526-159092595:-|nuORF 38.17557092003332 0.0854718145212029 6 [VS]EHVDAAEK 10 -1 + 112.27 0.0 0.0 10.362 10.362 99.229 0.0 0.0 0.0 77.49282213420202 18.279550148593486 18.279550148593486 45.03205960551831 0 2.416386562212267 2.0 1.274227503252014 0.3252574989159953 [VS]EHVDAAEK;{[CT]|[{M(Oxidation (M))|F}G]}[{M(Oxidation (M))|F}T]VDAAEK;{[YC]|[HE]}VSVDAAA[VS];[HV]ESVDAAA[VS];{[CT]|[{M(Oxidation (M))|F}G]}KEE{M(Oxidation (M))|F}AEK;{[CT]|[{M(Oxidation (M))|F}G]}EKE{M(Oxidation (M))|F}AEK;{[YC]|[HE]}VSV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AW;{[CT]|[{M(Oxidation (M))|F}G]}A[VS]E{M(Oxidation (M))|F}AEK;{[YC]|[HE]}VSVD{[NV]|[RG]}[VS];{[YC]|[HE]}VSV[QA]E[VS] 10.362;6.2059;5.2728;4.4718;4.3003;4.185;3.6958;3.221;2.9849;2.2456 -;-;-;-;-;-;-;-;-;- 471 + 1 2.22 53776.1 0.3899999856948852 77 2848 2926 SUDHL4_400M_050219_2,2927 SUDHL4_400M_050219_2,2927,SVHEEVQEK False False SVQHVDAAEK 12.08291 542.76671141386 0.0 2926.0 ENST00000585682.5_1_4:159092526-159092595:-|nuORF 2.16645614306132 2.0 False 10.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2930 12.097 343.0 151350.0 25 0 14426.0 13082 HEDIVQESK 9 94 362.1806529178526 1083.520129353758 3 362.1804992556572 MULTI CID FTMS 0 0 0 2929 74127.359375 0.1793226747590126 37 -0.2037820816040039 1 Unmodified _HEDIVQESK_ ENSG00000100403|ENST00000352645|ZC3H7B 15.847184025352805 0.4077185912009129 6 [VS]AS{[MG]|[TS]}V[{M(Oxidation (M))|F}T]W 10 10 + 29.727 0.0 0.0 2.7436 2.7436 75.729 0.0 0.0 0.0 7.508943624335561 9.314178132293453 7.508943624335561 6.532125137753436 0 0.0 2.0 0.2614393726401688 0.0 [VS]AS{[MG]|[TS]}V[{M(Oxidation (M))|F}T]W;[VS]AS{[WT]|[RM]}[{M(Oxidation (M))|F}T]W;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}K{[VA]|[{I|L}G]}V[{M(Oxidation (M))|F}T]W;{[CT]|[{M(Oxidation (M))|F}G]}[{M(Oxidation (M))|F}T]VDAAEK;[{I|L}T]{M(Oxidation (M))|F}[RN][{M(Oxidation (M))|F}T]W;{[CT]|[{M(Oxidation (M))|F}G]}[{M(Oxidation (M))|F}T]VA{[DA]|[EG]}EK;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[CT]|[{M(Oxidation (M))|F}G]}AV[{M(Oxidation (M))|F}T]W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{[MG]|[TS]}V[{M(Oxidation (M))|F}T]W;{[TV]|[{I|L}S]}GS{[MG]|[TS]}V[{M(Oxidation (M))|F}T]W;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{[WT]|[RM]}[{M(Oxidation (M))|F}T]W 2.7436;2.1407;1.8572;1.8432;1.3093;1.2875;1.1025;0.93999;0.54686;0.34211 -;-;-;-;-;-;-;-;-;- 192 1 2.22 45432.4 1.0 78 2850 2929 SUDHL4_400M_050219_2,2930 SUDHL4_400M_050219_2,2930,HEDIVQESK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2931 12.109 680.0 63885.0 25 0 7082.4 -1 LSCPWNLSQG 10 72 581.2727928464732 1160.5310327597465 2 581.2720825076103 MULTI CID FTMS 0 0 0 2929 117218.4765625 0.5532573378303972 -21 0.1100873947143554 2 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))PWNLSQG_ ENST00000561688.1_1_16:2294242-2294386:-|nuORF 18.373094154950223 0.5392593366289069 6 {[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}SP[{M(Oxidation (M))|F}V]YM 10 -1 + 38.178 0.0 0.0 3.2897 3.2897 77.584 0.0 0.0 0.0 7.688324713653074 2.939455175668755 2.939455175668755 7.786596949921218 0 1.079689690656103 1.5228787452803376 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}SP[{M(Oxidation (M))|F}V]YM;{[TV]|[{I|L}S]}{[MS]|[{M(Oxidation (M))|F}A]}S{M(Oxidation (M))|F}[VP]YM;{[SA]|[TG]}GPS{NN|[MP]|[D{I|L}]|[EV]}P{[WT]|[RM]}M;{[QS]|[NT]}PS{NN|[MP]|[D{I|L}]|[EV]}P{[WT]|[RM]}M;{[SA]|[TG]}GP[{M(Oxidation (M))|F}V]P{[C(Carbamidomethyl (C))E]|[WC]}VV;{[QS]|[NT]}P[{M(Oxidation (M))|F}V]P{[C(Carbamidomethyl (C))E]|[WC]}VV 3.2897;2.6187;0.90911;0.67322;0.55138;0.31548 -;-;-;-;-;- 251 + 1 2.22 38182.3 1.0 79 2850 2929 SUDHL4_400M_050219_2,2931 SUDHL4_400M_050219_2,2931,LSCPWNLSQG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 2944 12.169 800.0 100580.0 25 0 14982.0 -1 LSVLCKHVCAN 11 75 434.2210774838825 1299.6414030518474 3 434.2207519412041 MULTI CID FTMS 0 0 0 2943 61245.63671875 0.6537569518745564 -8 0.0321273803710937 1 2 Carbamidomethyl (C) _LSVLC(Carbamidomethyl (C))KHVC(Carbamidomethyl (C))AN_ nc|ENSG00000198822|Q14832-2|GRM3 6.623454094837244 0.8438980474264925 6 SAN 3 -1 15.63 0.0 0.0 1.2026 0.0 0.0 1009.5183669941596 0.0 1009.5183669941596 0.0 0.1452280640859999 0.0 0.0 0 0.3182503180159344 0.0 0.5 0.0 SAN 1.2026 - 27 1 2.22 69749.5 0.8799999952316284 80 2862 2943 SUDHL4_400M_050219_2,2944 SUDHL4_400M_050219_2,2944,LSVLCKHVCAN False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 2955 12.222 793.0 59747.0 25 0 3473.4 + 31593 RQQQSQTAY 9 86 555.270477470017 1108.526402006834 2 555.2695190310478 MULTI CID FTMS 0 0 0 2954 90632.984375 0.4933309655533082 -40 0.216552734375 1 Unmodified _RQQQSQTAY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 31.26834338654808 0.1333407332142048 6 {[{M(Oxidation (M))|F}H]|[RQ]}QQSQTAY 9 0 + 59.831 0.0 0.0 5.3973 5.3973 83.377 0.0 0.0 0.0 4.137342758552691 48.14835015492783 4.137342758552691 6.638568026386693 0 0.9247425010840048 0.0 0.5 0.0 + + {[{M(Oxidation (M))|F}H]|[RQ]}QQSQTAY;[RN]AAQSQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}Q[AG]SQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}[AG]QSQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}QQS[AG]TAY;[RN]AAQS[AG]TAY;[RN]AA[AG]SQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}[AG][AG]SQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}Q[AG]S[AG]TAY;{[{M(Oxidation (M))|F}H]|[RQ]}[AG]QS[AG]TAY 5.3973;4.7985;4.5667;4.5667;4.5667;3.9717;3.9717;3.7399;3.7399;3.7399 +;-;-;-;-;-;-;-;-;- + 241 1 2.22 39019.8 1.0 81 2872 2954 SUDHL4_400M_050219_2,2955 SUDHL4_400M_050219_2,2955,RQQQSQTAY False True RQQQSQTAY 12.221878 555.269519031048 2871483.5 2954.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 8.08561404546102 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 2959 12.246 800.0 142430.0 25 0 52598.0 -1 ELSVLLLEMK 10 97 397.5607552089446 1189.660436227034 3 397.5607177615166 MULTI CID FTMS 0 0 0 2958 77694.0390625 0.6816447504063204 -6 0.0364141464233398 1 Oxidation (M) _ELSVLLLEM(Oxidation (M))K_ ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1 12.872603262515298 0.6315522313594999 6 KTE 3 -1 28.94 0.0 0.0 2.4326 0.0 0.0 63.99888078828605 764.454191282363 828.4530720706491 0.0 0.0 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 KTE 2.4326 - 63 + 1 2.22 92736.4 0.3700000047683716 82 2875 2958 SUDHL4_400M_050219_2,2959 SUDHL4_400M_050219_2,2959,ELSVLLLEMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3014 12.472 531.0 92227.0 25 0 6028.4 + 31594 RQQQSQTAY 9 86 555.270477470017 1108.526402006834 2 555.2697631716728 MULTI CID FTMS 0 0 0 3013 115604.53125 0.6292554020722668 17 -0.1132926940917968 1 Unmodified _RQQQSQTAY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 38.17557092003332 0.0854718145212029 6 [AG]RQQSQTAY 10 3 + 71.277 0.0 0.0 6.4299 6.4299 85.473 0.0 0.0 0.0 5.196736054051257 16.53212513775344 5.196736054051257 5.196736054051257 0 1.0 1.0969100130080565 0.9247425010840048 0.0 [AG]RQQSQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}QQSQTAY;[AG]RQQS[AG]TAY;[AG]RQ[AG]SQTAY;[AG]R[AG]QSQTAY;[RN]AAQSQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}Q[AG]SQTAY;{[{M(Oxidation (M))|F}H]|[RQ]}QQS[AG]TAY;{[{M(Oxidation (M))|F}H]|[RQ]}[AG]QSQTAY;[AG]R[AG]QS[AG]TAY 6.4299;5.9611;5.6031;5.6031;5.6031;5.4226;5.1304;5.1304;5.1304;4.7797 -;+;-;-;-;-;-;-;-;- + 462 1 2.22 44495.7 1.0 83 2929 3013 SUDHL4_400M_050219_2,3014 SUDHL4_400M_050219_2,3014,RQQQSQTAY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3017 12.492 800.0 94587.0 25 0 7619.8 + 38115 TPLRAQSQSV 10 114 362.8684878681957 1085.5836342047871 3 362.8679992556572 MULTI CID FTMS 0 0 0 3016 97906.96875 0.0208950911128661 -90 0.4497489929199219 1 Unmodified _TPLRAQSQSV_ REV__ENST00000519935.1_1_7:27209327-27211245:+|nuORF 22.736283301280096 0.4578556481593033 6 KPTV 4 -1 35.974 0.0 0.0 3.3138 0.0 0.0 642.3071495228799 0.0 642.3071495228799 0.0 22.78659694992122 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 KPTV 3.3138 - 154 1 2.22 70822.2 0.959999978542328 84 2931 3016 SUDHL4_400M_050219_2,3017 SUDHL4_400M_050219_2,3017,TPLRAQSQSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3024 12.529 800.0 78593.0 25 0 11926.0 -1 IRAPTTMK 8 85 467.2631040446212 932.5116551560424 2 467.2631408572197 MULTI CID FTMS 0 0 0 3023 97830.359375 0.5079808615421512 -13 0.0725574493408203 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 25.399314129420983 0.5099049743284904 6 T{M(Oxidation (M))|F}K 3 -1 32.096 0.0 0.0 3.4419 0.0 0.0 538.3236801577988 0.0 538.3236801577988 0.0 11.064921830680705 0.0 0.0 0 1.0 0.0 0.0 0.3054621874040891 T{M(Oxidation (M))|F}K 3.4419 + + 69 + 1 2.22 55138.7 0.3899999856948852 85 2937 3023 SUDHL4_400M_050219_2,3024 SUDHL4_400M_050219_2,3024,IRAPTTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3031 12.565 800.0 82419.0 25 0 8413.2 + 28499 PTKGRADLTQ 10 77 543.7990671678605 1085.5835814025208 2 543.7991210818291 MULTI CID FTMS 0 0 0 3030 72392.7890625 0.051996952102284 -77 0.3669900894165039 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 22.65808497894818 0.4596126414678359 6 TPKG[YR]GTP 9 -1 68.695 0.0 0.0 6.3279 0.0 0.0 0.0 125.07227502994375 125.07227502994375 58.31596532564614 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.805462187404089 0.0 TPKG[YR]GTP 6.3279 - 170 + 1 2.22 59535.4 0.3799999952316284 86 2943 3030 SUDHL4_400M_050219_2,3031 SUDHL4_400M_050219_2,3031,PTKGRADLTQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3049 12.646 800.0 69459.0 25 0 10423.0 + -1 TPTIRTMK 8 89 482.26833056955263 962.5221082059052 2 482.2684509158134 MULTI CID FTMS 0 0 0 3048 63127.59765625 0.4925325567080966 -52 0.2541675567626953 1 Oxidation (M) _TPTIRTM(Oxidation (M))K_ REV__ENSG00000135447|ENST00000257905|PPP1R1A 24.020572477871973 0.5389365498350341 6 ST{M(Oxidation (M))|F}K 4 -1 39.806 0.0 0.0 4.1356 0.0 0.0 481.3080711959428 0.0 481.3080711959428 0.0 11.3746490085708 0.0 0.0 0 1.0 0.0 0.3252574989159953 0.2396518287104437 ST{M(Oxidation (M))|F}K 4.1356 - 182 + 1 2.22 44926.8 0.3799999952316284 87 2960 3048 SUDHL4_400M_050219_2,3049 SUDHL4_400M_050219_2,3049,TPTIRTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3072 12.735 50.0 672220.0 25 0 29670.0 + 38116 TPLRAQSQSV 10 86 362.8684878681957 1085.5836342047871 3 362.8681823611259 MULTI CID FTMS 0 0 0 3071 1108681.0 0.2366122739358481 -39 0.1817855834960937 1 Unmodified _TPLRAQSQSV_ REV__ENST00000519935.1_1_7:27209327-27211245:+|nuORF 17.11289562659939 0.5604042439455784 6 SV 2 -1 33.711 0.0 0.0 3.1054 0.0 0.0 881.4726905206848 0.0 881.4726905206848 0.0 10.23423599991169 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.0 SV 3.1054 + + 152 1 2.22 41231.5 1.0 88 2982 3071 SUDHL4_400M_050219_2,3072 SUDHL4_400M_050219_2,3072,TPLRAQSQSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3081 12.78 800.0 123630.0 25 0 22400.0 -1 IRAPTTMK 8 92 467.2630848605499 932.5116167878998 2 467.2628356814384 MULTI CID FTMS 0 0 0 3080 164140.671875 0.5912853069836488 -31 0.1380891799926757 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 22.736283301280096 0.5659792798204337 6 T{M(Oxidation (M))|F}K 3 -1 39.182 0.0 0.0 4.2018 0.0 0.0 538.3237943775467 0.0 538.3237943775467 0.0 17.495367849778773 0.0 0.0 0 1.274227503252014 0.0 0.0 0.3252574989159953 T{M(Oxidation (M))|F}K 4.2018 + + 154 + 1 2.22 80916.1 0.5400000214576721 89 2990 3080 SUDHL4_400M_050219_2,3081 SUDHL4_400M_050219_2,3081,IRAPTTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3088 12.805 75.0 734640.0 25 0 70370.0 + 28500 PTKGRADLTQ 10 64 543.7990671678605 1085.5835814025208 2 543.7988159060478 MULTI CID FTMS 0 0 0 3087 679279.625 0.4879003914974001 -24 0.1098165512084961 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 17.44264345198275 0.5548713957087773 6 TPKG[YR]GTP 9 -1 72.669 0.0 0.0 6.694 0.0 0.0 0.0 125.07230554752188 125.07230554752188 62.58024070117017 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.0 TPKG[YR]GTP 6.694 - 172 + 1 2.22 48119.9 1.0 90 2996 3087 SUDHL4_400M_050219_2,3088 SUDHL4_400M_050219_2,3088,PTKGRADLTQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3110 12.902 800.0 85516.0 25 0 12705.0 + -1 GVGNKLTMK 9 87 482.26833056955263 962.5221082059052 2 482.2679015994072 MULTI CID FTMS 0 0 0 3109 92510.671875 0.7217844402933081 5 -0.0447702407836914 1 Oxidation (M) _GVGNKLTM(Oxidation (M))K_ REV__ENST00000604354.1_1_5:180743383-180748792:+|nuORF 24.020572477871973 0.2255576514309169 6 KTE{I|L}PTTG 8 -1 44.924 0.0 0.0 4.6673 0.0 0.0 63.99834494534486 68.05143152408436 132.04977646942922 0.0 0.0 0.0 0.0 0 0.5 0.0 1.6549471895720984 0.0 KTE{I|L}PTTG 4.6673 - 267 + 1 2.22 60592.7 0.4199999868869781 91 3017 3109 SUDHL4_400M_050219_2,3110 SUDHL4_400M_050219_2,3110,GVGNKLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3114 12.926 800.0 90732.0 25 0 4775.6 + 43497 WWRVCDQNA 9 90 589.2649353557116 1176.515317778223 2 589.2640258669853 MULTI CID FTMS 0 0 0 3113 69681.6875 0.7656245721436882 -1 0.0040578842163085 1 Unmodified _WWRVCDQNA_ REV__ENST00000523376.5_1_11:14926604-14927012:+|nuORF 19.256988751693697 0.3154191944385105 6 [AG]NAA{[{M(Oxidation (M))|F}D]|MM}AQQD 11 -1 59.289 0.0 0.0 5.0394 0.0 0.0 0.0 85.03929766667571 85.03929766667571 43.62714191050674 0.0 0.0 0.0 0 0.6549471895720985 2.0 0.0 1.8539171939081167 [AG]NAA{[{M(Oxidation (M))|F}D]|MM}AQQD 5.0394 - 1054 1 2.22 57446.5 0.3700000047683716 92 3020 3113 SUDHL4_400M_050219_2,3114 SUDHL4_400M_050219_2,3114,WWRVCDQNA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3118 12.951 800.0 73085.0 25 0 7285.2 + -1 SQGFSHSQM 9 107 513.2033267230992 1024.3921005129982 2 513.2031738162041 MULTI CID FTMS 0 0 0 3117 97169.765625 0.4582572993373068 -18 0.0972023010253906 1 Oxidation (M) _NTGM(Oxidation (M))WESNA_ ENSG00000181143|ENST00000397910|MUC16 32.78568957990786 0.1150597335874693 6 {[QS]|[NT]}G[MD]SWQS 9 -1 + 61.216 0.0 0.0 5.9758 5.9758 79.372 0.0 0.0 0.0 19.3336183099742 39.01384540601369 19.3336183099742 1.249387366082999 0 0.8494850021680094 1.0457574905606752 0.6549471895720985 0.6382104921644451 {[QS]|[NT]}G[MD]SWQS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}QS;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}ET{[CA]|SS}S;{[QS]|[NT]}G[MD]SW[AG]S;{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}E{M(Oxidation (M))|F}[AG]S;{[QS]|[NT]}{[WN]|[YH]}E{M(Oxidation (M))|F}QS;{[QS]|[NT]}{[WN]|[YH]}ET{[CA]|SS}S;{[QS]|[NT]}G[MD]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}{[WN]|[YH]}E{M(Oxidation (M))|F}[AG]S;[HS][YQ]E{M(Oxidation (M))|F}QS 5.9758;5.8538;5.8353;5.0769;4.9549;4.5984;4.5747;4.016;3.6943;1.7983 -;-;-;-;-;-;-;-;-;- 414 1 2.22 48442.6 0.3899999856948852 93 3023 3117 SUDHL4_400M_050219_2,3118 SUDHL4_400M_050219_2,3118,NTGMWESNA False False SQGFSHSQM 12.95078 513.203173816204 0.0 3117.0 ENSG00000181143|ENST00000397910|MUC16 3.98011314868927 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3124 12.978 492.0 114230.0 25 0 6256.4 -1 HGRFKRRM 8 88 368.53798335398574 1102.5921206621572 3 368.5377990603447 MULTI CID FTMS 0 0 0 3123 116168.9140625 1.0 0 0.0 1 Oxidation (M) _HGRFKRRM(Oxidation (M))_ ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8 3.944395688203298 0.8003900995685364 6 {M(Oxidation (M))|F} 1 -1 15.485 0.0 0.0 1.4044 0.0 0.0 937.5460829197727 0.0 937.5460829197727 0.0 -4.424712680444362 -4.424712680444362 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.4044 + + 17 + 1 2.22 54311.1 1.0 94 3028 3123 SUDHL4_400M_050219_2,3124 SUDHL4_400M_050219_2,3124,HGRFKRRM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3130 13.011 800.0 86983.0 25 0 16286.0 -1 VIIRVYHGM 9 62 552.3029046857404 1102.5912564382809 2 552.3026611208916 MULTI CID FTMS 0 0 0 3129 60459.54296875 0.5712696556099804 -3 0.0120038986206054 1 Oxidation (M) _VIIRVYHGM(Oxidation (M))_ ENST00000412626.2_1_9:67272267-67281749:-|nuORF;nc|ENSG00000279688|A6NL99|AQP7P3 4.75600775471527 0.7486543447549536 6 T{M(Oxidation (M))|F} 2 -1 22.959 0.0 0.0 2.0823 0.0 0.0 836.4980385201151 0.0 836.4980385201151 0.0 19.463950151760656 0.0 0.0 0 0.5 0.0 0.0 0.0 T{M(Oxidation (M))|F} 2.0823 - 9 + 1 2.22 55945.0 0.3700000047683716 95 3033 3129 SUDHL4_400M_050219_2,3130 SUDHL4_400M_050219_2,3130,VIIRVYHGM False False False False non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_2 3133 13.028 654.0 141200.0 25 0 21467.0 -1 TKMKPQGK 8 94 467.2630848605499 932.5116167878998 2 467.2628661990166 MULTI CID FTMS 0 0 0 3132 169146.375 0.609317392968947 14 -0.0683584213256836 1 Oxidation (M) _TKM(Oxidation (M))KPQGK_ ENSG00000125686|ENST00000300651|MED1 16.942295170755138 0.6606234159769251 6 KT[{I|L}P][WP]K 7 -1 34.455 0.0 0.0 3.6949 0.0 0.0 63.998719685335296 0.0 63.998719685335296 0.0 22.236607226101555 0.0 0.0 0 1.1989700043360187 0.0 0.9247425010840048 0.3252574989159953 KT[{I|L}P][WP]K 3.6949 - 147 + 1 2.22 76927.5 1.0 96 3035 3132 SUDHL4_400M_050219_2,3133 SUDHL4_400M_050219_2,3133,TKMKPQGK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3141 13.059 169.0 395970.0 25 0 44008.0 + 28501 PTKGRADLTQ 10 58 543.7990671678605 1085.5835814025208 2 543.7988159060478 MULTI CID FTMS 0 0 0 3140 476918.125 0.3425519202047404 22 -0.1111478805541992 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 22.65808497894818 0.4596126414678359 6 TPKGV[YG]GTP 10 -1 80.438 0.0 0.0 7.4097 0.0 0.0 0.0 125.07248865299064 125.07248865299064 64.24024714504206 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.4247425010840047 TPKGV[YG]GTP 7.4097 - 661 + 1 2.22 55179.4 1.0 97 3042 3140 SUDHL4_400M_050219_2,3141 SUDHL4_400M_050219_2,3141,PTKGRADLTQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3152 13.107 549.0 161770.0 25 0 49209.0 + 18929 LCTLEREVRGD 11 67 430.8881103402046 0 430.8881713747978 PEAK CID FTMS 0 0 0 3151 191438.625 0.7763530781344216 128 -0.6523017883300781 1 Unmodified _LCTLEREVRGD_ REV__ENSG00000158683|ENST00000289672|PKD1L1;REV__nc|ENSG00000158683|Q8TDX9-2|PKD1L1 5.296884461304476 0.47618401536486 6 GTS 3 -1 15.49 0.0 0.0 1.8016 0.0 0.0 132.36898083490297 479.27411829166255 611.6430991265655 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 GTS 1.8016 - 16 + 1 2.22 74937.5 1.0 98 3052 3151 SUDHL4_400M_050219_2,3152 SUDHL4_400M_050219_2,3152,LCTLEREVRGD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3155 13.128 800.0 83933.0 25 0 44498.0 + -1 VIFYLYNWMNH 11 44 505.9069223869446 0 505.9073364138603 PEAK CID FTMS 0 0 0 3154 112651.7734375 0.1011986082940004 235 -1.1665153503417969 1 Oxidation (M) _VIFYLYNWM(Oxidation (M))NH_ REV__ENSG00000096433|ENST00000605930|ITPR3 0.4545168274142398 0.4761840153648598 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 60087.7 0.3899999856948852 99 3054 3154 SUDHL4_400M_050219_2,3155 SUDHL4_400M_050219_2,3155,VIFYLYNWMNH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3172 13.201 603.0 82339.0 25 0 9260.8 -1 ESCSPKNNM 9 87 513.2033267230992 1024.3921005129982 2 513.2034179568291 MULTI CID FTMS 0 0 0 3171 129726.59375 0.6117968703714566 29 -0.1651792526245117 1 Oxidation (M) _ESCSPKNNM(Oxidation (M))_ ENSG00000138780|ENST00000515279|GSTCD;nc|ENSG00000138780|Q8NEC7-3|GSTCD 37.97399986684836 0.0865783450051559 6 ES 2 -1 45.217 0.0 0.0 4.414 0.0 0.0 0.0 805.2959078424436 805.2959078424436 10.561741395632737 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 ES 4.414 + + 159 + 1 2.22 43935.9 1.0 100 3070 3171 SUDHL4_400M_050219_2,3172 SUDHL4_400M_050219_2,3172,ESCSPKNNM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3181 13.246 800.0 64502.0 25 0 3273.2 + 35562 STQMTITTQK 10 92 577.7896677628225 1153.564782592445 2 577.7898437380791 MULTI CID FTMS 0 0 0 3180 98985.8359375 0.2848217172747149 -54 0.2784547805786133 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 69.33821966488729 0.0189579340102328 6 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 59.311 0.0 0.0 5.1416 5.1416 84.618 0.0 0.0 0.0 44.24512749190507 16.30338178237008 16.30338178237008 9.164539485499262 0 0.6382104921644451 0.0 0.5 1.079689690656103 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA 5.1416;4.3471;4.3471;3.5558;3.5167;2.7254 +;-;-;-;-;- + 279 + 1 2.22 45727.0 0.3899999856948852 101 3078 3180 SUDHL4_400M_050219_2,3181 SUDHL4_400M_050219_2,3181,STQMTITTQK True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3187 13.278 800.0 59817.0 25 0 3156.0 -1 VNIVEPMV 8 97 458.7459113413388 915.4772697494776 2 458.7451965212822 MULTI CID FTMS 0 0 0 3186 74546.828125 0.8485182356394068 -1 0.0040645599365234 1 Oxidation (M) _VNIVEPM(Oxidation (M))V_ ENSG00000139304|ENST00000644991|PTPRQ;nc|ENSG00000139304|Q9UMZ3|PTPRQ 18.13498045792455 0.6430038125133779 6 VGGP[KS]WSV 9 -1 + 71.96 0.0 0.0 7.8604 7.8604 95.844 0.0 0.0 0.0 64.88183529018755 12.252684618815088 12.252684618815088 18.00907468880581 0 0.6747425010840047 2.0 0.2059771852360797 0.0 VGGP[KS]WSV;VNP[KS]WSV;VG[YR][WH]V;RGP[QT][TA]SV;RGP[QT]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;RGYV[WH]V 7.8604;5.8932;3.9432;3.3573;2.7535;2.1327 -;-;-;-;-;- 151 + 1 2.22 40397.0 0.3799999952316284 102 3083 3186 SUDHL4_400M_050219_2,3187 SUDHL4_400M_050219_2,3187,VNIVEPMV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3194 13.315 800.0 72579.0 25 0 10687.0 -1 IRAPTTMK 8 79 467.263144274496 932.511735615792 2 467.2630187869072 MULTI CID FTMS 0 0 0 3193 73780.2734375 0.6742828652631631 -5 0.0201454162597656 1 Oxidation (M) _IRAPTTM(Oxidation (M))K_ ENSG00000182934|ENST00000332118|SRPRA;nc|ENSG00000182934|P08240-2|SRPRA 19.256988751693697 0.6264283240490721 6 AT{M(Oxidation (M))|F}K 4 -1 40.327 0.0 0.0 4.3246 0.0 0.0 467.2921314923844 0.0 467.2921314923844 0.0 28.10861629032797 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.0 AT{M(Oxidation (M))|F}K 4.3246 - 89 1 2.22 49748.3 0.3899999856948852 103 3089 3193 SUDHL4_400M_050219_2,3194 SUDHL4_400M_050219_2,3194,IRAPTTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3196 13.321 194.0 353490.0 25 0 38087.0 + 28502 PTKGRADLTQ 10 58 543.7990519139579 1085.5835508947157 2 543.7988769412041 MULTI CID FTMS 0 0 0 3195 374403.0625 0.7925558519809798 -10 0.0651226043701171 1 Unmodified _PTKGRADLTQ_ REV__ENST00000427199.2_1_5:114916936-114937963:-|nuORF 17.44264345198275 0.5548713957087773 6 TPKV[YN]GTP 9 -1 72.457 0.0 0.0 6.6745 0.0 0.0 0.0 125.07227502994375 125.07227502994375 54.6666670368576 0.0 0.0 0.0 0 0.8807196863200843 1.5228787452803376 0.3807196863200844 0.0 TPKV[YN]GTP 6.6745 - 366 + 1 2.22 56999.4 1.0 104 3090 3195 SUDHL4_400M_050219_2,3196 SUDHL4_400M_050219_2,3196,PTKGRADLTQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3235 13.486 774.0 89544.0 25 0 47634.0 -1 WYRYKTYYCL 10 48 505.90697128092313 0 505.9070922732353 PEAK CID FTMS 0 0 0 3234 101752.25 0.5428535559872872 33 -0.1866474151611328 1 Carbamidomethyl (C) _WYRYKTYYC(Carbamidomethyl (C))L_ nc|ENSG00000125107|A5YKK6-4|CNOT1 0.1398918051519055 0.3961065659209837 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 59397.2 1.0 105 3128 3234 SUDHL4_400M_050219_2,3235 SUDHL4_400M_050219_2,3235,WYRYKTYYCL False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 3237 13.493 225.0 185250.0 25 0 9554.1 + 35563 STQMTITTQK 10 76 577.7896677628225 1153.564782592445 2 577.7899658083916 MULTI CID FTMS 0 0 0 3236 288154.5 0.8291353884434316 -3 0.0238733291625976 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 78.06048673739656 0.0186573233964999 6 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 74.83 0.0 0.0 6.4869 6.4869 88.942 0.0 0.0 0.0 59.671619863185725 17.310494115932933 17.310494115932933 9.164539485499262 0 0.6747425010840047 0.0 1.305462187404089 1.0114393726401687 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA 6.4869;5.6924;5.6924;4.9011;4.7747;3.9834 +;-;-;-;-;- + 208 + 1 2.22 36686.5 1.0 106 3129 3236 SUDHL4_400M_050219_2,3237 SUDHL4_400M_050219_2,3237,STQMTITTQK True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3259 13.59 800.0 90923.0 25 0 10461.0 + 17534 KPLRTASPQ 9 79 499.2930560095912 996.5715590859824 2 499.2924072146416 MULTI CID FTMS 0 0 0 3258 79033.1171875 0.6017612104227623 -8 0.032196044921875 1 Unmodified _KPLRTASPQ_ REV__ENSG00000152082|ENST00000281871|MZT2B;REV__ENSG00000173272|ENST00000309451|MZT2A;REV__ENST00000410036.2_1_2:132241636-132250313:-|nuORF;REV__ENST00000480182.1_1_2:130940128-130948196:+|nuORF 19.256988751693697 0.3154191944385105 6 KPT 3 -1 38.5 0.0 0.0 3.8632 0.0 0.0 0.0 667.3525900979774 667.3525900979774 27.07995118593887 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 KPT 3.8632 - 30 + 1 2.22 60033.2 0.4399999976158142 107 3150 3258 SUDHL4_400M_050219_2,3259 SUDHL4_400M_050219_2,3259,KPLRTASPQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3260 13.604 800.0 124220.0 25 0 20880.0 + 15701 IQRLETMK 8 85 509.7893663320958 1017.5641797309916 2 509.7891723513603 MULTI CID FTMS 0 0 0 3258 93450.515625 0.2342452822207683 -22 0.103485107421875 2 Unmodified _IQRLETMK_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 29.081581746732265 0.4323690340403521 6 M{[VA]|[{I|L}G]}P{I|L}TMK 8 -1 52.172 0.0 0.0 5.1272 0.0 0.0 128.09520156074376 0.0 128.09520156074376 0.0 25.48963451112506 0.0 0.0 0 2.305462187404089 0.0 0.4247425010840047 0.0 M{[VA]|[{I|L}G]}P{I|L}TMK 5.1272 - 243 1 2.22 80274.7 0.4099999964237213 108 3150 3258 SUDHL4_400M_050219_2,3260 SUDHL4_400M_050219_2,3260,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3261 13.616 715.0 74029.0 25 0 3324.6 + 7506 EHDQPTVQNQ 10 96 598.2705121887678 1194.5264714443356 2 598.2706786990166 MULTI CID FTMS 0 0 0 3258 81774.046875 0.6409263610062009 -2 0.008122444152832 3 Unmodified _EHDQPTVQNQ_ REV__ENSG00000101811|ENST00000372972|CSTF2;REV__nc|ENSG00000101811|P33240-2|CSTF2 27.628801355627647 0.3479284626772844 6 Q[WK]ECQN 7 -1 28.817 0.0 0.0 2.4124 0.0 0.0 260.11287786003635 0.0 260.11287786003635 0.0 -0.3202632114092196 -0.3202632114092196 0.0 0 0.0 0.0 0.0 1.1861818737241734 Q[WK]ECQN 2.4124 - 655 + 1 2.22 42369.0 1.0 109 3150 3258 SUDHL4_400M_050219_2,3261 SUDHL4_400M_050219_2,3261,EHDQPTVQNQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3273 13.665 336.0 120590.0 25 0 5491.0 + 12094 GQHSHVVRY 9 88 361.5207306449116 1081.540362534935 3 361.5206481814384 MULTI CID FTMS 0 0 0 3272 70700.390625 0.5706003357529614 1 -0.0086803436279296 1 Unmodified _GQHSHVVRY_ ENSG00000166483|ENST00000450114|WEE1;ENST00000524549.1_1_11:9597437-9598815:+|nuORF;nc|ENSG00000166483|P30291-2|WEE1 10.073929032068715 0.563993802247229 6 SHV[RV]Y 6 3 15.15 0.0 0.0 1.4008 0.0 0.0 322.1377879273162 0.0 322.1377879273162 0.0 9.6657624451305 0.0 0.0 0 0.0 0.0 0.0 0.0 + SHV[RV]Y 1.4008 + + 124 + 1 2.22 39203.2 1.0 110 3161 3272 SUDHL4_400M_050219_2,3273 SUDHL4_400M_050219_2,3273,GQHSHVVRY False True GQHSHVVRY 13.665267 361.520648181438 366159.875 3272.0 nc|ENSG00000166483|P30291-2|WEE1;;ENSG00000166483|ENST00000450114|WEE1;;ENST00000524549.1_1_11:9597437-9598815:+|nuORF 4.957603057225545 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3286 13.723 628.0 144920.0 25 0 78035.0 -1 0 58 490.28358179864057 489.2763053320406 1 490.2838012576103 MULTI CID FTMS 0 0 0 3285 134536.84375 0.8509206509460095 2 -0.0174036026000976 1 6 Y 1 -1 12.764 0.0 0.0 2.6088 0.0 0.0 308.2020693474687 0.0 308.2020693474687 0.0 12.764209843288905 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.6088 - 4 + 1 2.22 76416.1 1.0 111 3173 3285 SUDHL4_400M_050219_2,3286 SUDHL4_400M_050219_2,3286, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3300 13.781 399.0 104990.0 25 0 7922.6 31042 RLHTGEKPY 9 86 367.5344476422329 1099.5815135268988 3 367.5335265994072 MULTI CID FTMS 0 0 0 3299 45686.4140625 0.5362849699721882 1 -0.0096940994262695 1 Unmodified _RLHTGEKPY_ ENSG00000117010|ENST00000372699|ZNF684;ENSG00000142065|ENST00000270001|ZFP14;ENSG00000143067|ENST00000421812|ZNF697;ENSG00000152439|ENST00000282292|ZNF773;ENSG00000153896|ENST00000329285|ZNF599;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000160336|ENST00000684525|ZNF761;ENSG00000166529|ENST00000292450|ZSCAN21;ENSG00000167232|ENST00000300619|ZNF91;ENSG00000167562|ENST00000391785|ZNF701;ENSG00000168661|ENST00000601142|ZNF30;ENSG00000178665|ENST00000429591|ZNF713;ENSG00000179909|ENST00000684351|ZNF154;ENSG00000180257|ENST00000444460|ZNF816;ENSG00000180257|ENST00000444460|ZNF816;ENSG00000182986|ENST00000682928|ZNF320;ENSG00000186300|ENST00000334241|ZNF555;ENSG00000187187|ENST00000347077|ZNF546;ENSG00000196345|ENST00000426540|ZKSCAN7;ENSG00000196417|ENST00000396408|ZNF765;ENSG00000196417|ENST00000396408|ZNF765;ENSG00000196670|ENST00000502412|ZFP62;ENSG00000197050|ENST00000337995|ZNF420;ENSG00000197050|ENST00000337995|ZNF420;ENSG00000197385|ENST00000360311|ZNF860;ENSG00000197385|ENST00000360311|ZNF860;ENSG00000197808|ENST00000588268|ZNF461;ENSG00000197808|ENST00000588268|ZNF461;ENSG00000198298|ENST00000361807|ZNF485;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198346|ENST00000396403|ZNF813;ENSG00000198482|ENST00000359798|ZNF808;ENSG00000198538|ENST00000457749|ZNF28;ENSG00000198538|ENST00000457749|ZNF28;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000203326|ENST00000474037|ZNF525;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000204604|ENST00000595646|ZNF468;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213793|ENST00000638862|ZNF888;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000213799|ENST00000458035|ZNF845;ENSG00000221994|ENST00000276054|ZNF630;ENSG00000250571|ENST00000340042|GLI4;ENSG00000258405|ENST00000421239|ZNF578;ENSG00000258405|ENST00000421239|ZNF578;ENSG00000278318|ENST00000614049|ZNF229;ENSG00000278318|ENST00000614049|ZNF229;ENSG00000278318|ENST00000614049|ZNF229;ENST00000270443.8_1_19:53472914-53473064:-|nuORF;ENST00000493756.1_1_1:40997452-41013129:+|nuORF;ENST00000523812.1_1_8:144357822-144358971:+|nuORF;ENST00000574529.1_1_17:52031395-52031542:+|nuORF;ENST00000601957.5_1_19:35433558-35435739:+|nuORF;nc|ENSG00000152439|Q6PK81-2|ZNF773;nc|ENSG00000167232|Q05481-2|ZNF91;nc|ENSG00000167562|Q9NV72|ZNF701;nc|ENSG00000168661|P17039-2|ZNF30;nc|ENSG00000186300|Q8NEP9-2|ZNF555;nc|ENSG00000186300|Q8NEP9-4|ZNF555;nc|ENSG00000197050|Q8TAQ5-2|ZNF420;nc|ENSG00000197808|Q8TAF7-2|ZNF461;nc|ENSG00000197808|Q8TAF7-2|ZNF461;nc|ENSG00000198298|Q8NCK3-2|ZNF485;nc|ENSG00000198482|Q8N4W9-2|ZNF808;nc|ENSG00000198538|P17035-2|ZNF28;nc|ENSG00000198538|P17035-2|ZNF28;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000204604|Q5VIY5-2|ZNF468;nc|ENSG00000221994|Q2M218-2|ZNF630;nc|ENSG00000278318|Q9UJW7-2|ZNF229;nc|ENSG00000278318|Q9UJW7-2|ZNF229;nc|ENSG00000278318|Q9UJW7-2|ZNF229;nc|ENSG00000278970|Q8NB50-3|ZFP62;nc|ENSG00000293317|Q9H963|ZNF702P 7.101721422024254 0.6667666702315642 6 [R{I|L}]H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RPY 8 4 [R{I|L}]H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}R + + 14.949 1.2148 0.14788 1.3595 1.3595 50.006 0.0 0.0 0.0 0.0 3.5285169349749346 0.0 0.0 0 0.0 0.0 0.0 0.0 [R{I|L}]H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RPY 1.3595 - 28 + 1 2.22 38825.2 1.0 112 3186 3299 SUDHL4_400M_050219_2,3300 SUDHL4_400M_050219_2,3300,RLHTGEKPY False True RIHTGEKPY 13.781133 367.533526599407 348103.65625 3299.0 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681824:+|nuORF;;ENSG00000152926|ENST00000282869|ZNF117;;ENSG00000181894|ENST00000598312|ZNF329;;nc|ENSG00000197808|Q8TAF7-2|ZNF461;;ENSG00000141946|ENST00000269834|ZIM3;;nc|ENSG00000147124|P51814|ZNF41;;ENSG00000186230|ENST00000334181|ZNF749;;nc|ENSG00000185252|Q16587-3|ZNF74;;ENSG00000147118|ENST00000376943|ZNF182;;nc|ENSG00000189042|Q8N184-1|ZNF567;;ENSG00000204514|ENST00000435989|ZNF814;;nc|ENSG00000197062|Q16670-2|ZSCAN26;;nc|ENSG00000290687|P0CG31|ZNF286B;;nc|ENSG00000161298|Q96SR6-3|ZNF382;;ENSG00000153896|ENST00000329285|ZNF599;;nc|ENSG00000184635|P35789-2|ZNF93;;nc|ENSG00000005889|P17010-3|ZFX;;nc|ENSG00000115568|P52746|ZNF142;;ENSG00000171466|ENST00000453372|ZNF562;;ENST00000600766.1_3_19:23032061-23041232:+|nuORF;;ENSG00000186026|ENST00000421176|ZNF284;;ENSG00000213967|ENST00000594466|ZNF726;;nc|ENSG00000147118|P17025|ZNF182;;ENST00000397121.2_1_19:22362411-22362768:-|nuORF;;ENSG00000089335|ENST00000505242|ZNF302;;nc|ENSG00000157429|P17023-2|ZNF19;;ENSG00000169957|ENST00000380412|ZNF768;;ENSG00000117010|ENST00000372699|ZNF684;;ENSG00000186814|ENST00000333206|ZSCAN30;;ENSG00000173875|ENST00000343325|ZNF791;;ENSG00000257446|ENST00000547628|ZNF878;;ENST00000403682.7_1_22:20748811-20761255:+|nuORF;;ENSG00000196109|ENST00000397121|ZNF676;;ENSG00000196081|ENST00000418100|ZNF724;;ENSG00000181007|ENST00000392161|ZFP82;;ENSG00000186448|ENST00000344387|ZNF197;;ENSG00000160229|ENST00000344519|ZNF66;;nc|ENSG00000147124|P51814-2|ZNF41;;ENST00000535379.1_1_11:114107968-114121274:+|nuORF;;ENSG00000160908|ENST00000337673|ZNF394;;nc|ENSG00000197134|Q9Y2Q1-2|ZNF257;;ENSG00000005889|ENST00000304543|ZFX;;ENSG00000169740|ENST00000374433|ZNF32;;ENSG00000185869|ENST00000391711|ZNF829;;nc|ENSG00000161298|Q96SR6-2|ZNF382;;nc|ENSG00000197937|Q96SE7-2|ZNF347;;nc|ENSG00000197841|Q2M3W8-3|ZNF181;;nc|ENSG00000197619|Q8N8J6|ZNF615;;nc|ENSG00000290988|Q8N8C0|ZNF781;;ENSG00000269067|ENST00000594710|ZNF728;;nc|ENSG00000067646|P08048-3|ZFY;;ENSG00000167384|ENST00000592529|ZNF180;;ENST00000568079.5_1_16:75182493-75204229:+|nuORF 4.64793586730957 3.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3307 13.81 353.0 210980.0 25 0 60489.0 -1 EAVMCLREGIL 11 59 430.8880992440531 0 430.8880493044853 PEAK CID FTMS 0 0 0 3306 176703.3125 0.6872659460540864 -65 0.3353815078735351 1 Carbamidomethyl (C) _EAVMC(Carbamidomethyl (C))LREGIL_ ENST00000540341.1_1_12:8789534-8790158:+|nuORF 2.6312355333042263 0.4761840153648598 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 66645.5 1.0 113 3192 3306 SUDHL4_400M_050219_2,3307 SUDHL4_400M_050219_2,3307,EAVMCLREGIL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 3316 13.855 800.0 121160.0 25 0 19560.0 36647 TATRPITKM 9 91 509.7893663320958 1017.5641797309916 2 509.7893554568291 MULTI CID FTMS 0 0 0 3315 148950.546875 0.3733629788591353 28 -0.1495494842529297 1 Unmodified _TATRPITKM_ ENSG00000158636|ENST00000695367|EMSY;ENST00000531641.1_1_11:76237526-76255878:+|nuORF;nc|ENSG00000158636|Q7Z589-2|EMSY;nc|ENSG00000158636|Q7Z589-4|EMSY;nc|ENSG00000158636|Q7Z589-5|EMSY;nc|ENSG00000158636|Q7Z589-6|EMSY;nc|ENSG00000158636|Q7Z589|EMSY 24.99096001346401 0.2132109383330889 6 TMK 3 7 43.94 0.0 0.0 4.3182 0.0 0.0 639.3706327099753 0.0 639.3706327099753 0.0 22.068174985992783 0.0 0.0 0 1.424742501084005 0.0 0.0 0.3494850021680094 TMK 4.3182 - 173 + 1 2.22 77935.6 0.5400000214576721 114 3200 3315 SUDHL4_400M_050219_2,3316 SUDHL4_400M_050219_2,3316,TATRPITKM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3338 13.952 800.0 66510.0 25 0 4215.1 10997 GASDTLTGQA 10 92 460.71985944942486 919.4251659656496 2 460.7202026247978 MULTI CID FTMS 0 0 0 3337 101081.609375 0.2139840026588803 -25 0.1131591796875 1 Unmodified _GASDTLTGQA_ ENST00000468892.5_1_3:183910449-183911483:+|nuORF 21.74664581756881 0.480091245866545 6 SNS{I|L}[DP] 6 8 27.797 0.0 0.0 3.0233 0.0 0.0 288.1442281250194 0.0 288.1442281250194 0.0 9.380390763043277 0.0 0.0 0 0.0 0.0 1.1421590589602533 0.0 SNS{I|L}[DP] 3.0233 - 268 + 1 2.22 46774.0 0.9700000286102296 115 3221 3337 SUDHL4_400M_050219_2,3338 SUDHL4_400M_050219_2,3338,GASDTLTGQA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 3345 13.988 800.0 116180.0 25 0 56946.0 -1 0 62 490.28358179864057 489.2763053320406 1 490.2838928103447 MULTI CID FTMS 0 0 0 3344 111315.6640625 0.7040509847292282 56 -0.281804084777832 1 6 Y 1 -1 13.979 0.0 0.0 2.8572 0.0 0.0 308.2020998650468 0.0 308.2020998650468 0.0 13.979400086720377 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.8572 - 7 + 1 2.22 78233.1 0.4000000059604645 116 3227 3344 SUDHL4_400M_050219_2,3345 SUDHL4_400M_050219_2,3345, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3376 14.119 684.0 95583.0 25 0 22916.0 25656 NFVSFCQPHRQ 11 74 454.8826550182264 1361.6261356548794 3 454.8828307986259 MULTI CID FTMS 0 0 0 3375 62713.3125 0.7262945776160272 1 -0.0244970321655273 1 Unmodified _NFVSFCQPHRQ_ ENST00000448183.6_1_6:11200558-11306280:-|nuORF 6.623454094837244 0.8438980474264925 6 {[RE]|[WV]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 10 9 {[RE]|[WV]}HQ + + 47.076 6.6555 1.2095 3.4574 3.4574 52.548 0.0 0.0 0.0 0.0 39.54033167468004 0.0 0.0 0 1.424742501084005 0.0 0.0 0.6989700043360187 {[RE]|[WV]}HQ{M(Oxidation (M))|F}NT{M(Oxidation (M))|F}QR 3.4574 - 151 + 1 2.22 57122.8 1.0 117 3257 3375 SUDHL4_400M_050219_2,3376 SUDHL4_400M_050219_2,3376,NFVSFCQPHRQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 3377 14.129 575.0 92656.0 25 0 6014.1 + 12432 GTSPPSVEK 9 94 451.2350385795921 900.4555242259843 2 451.2348815798759 MULTI CID FTMS 0 0 0 3375 87899.0 0.2627605869582276 -34 0.1491146087646484 2 Unmodified _GTSPPSVEK_ ENSG00000181143|ENST00000397910|MUC16 19.361941925380144 0.3125782356748823 6 K 1 8 12.565 0.0 0.0 1.3954 0.0 0.0 754.3499772062562 0.0 754.3499772062562 0.0 0.5750804966763923 0.0 0.0 0 0.0 0.0 0.0 0.1595680409956017 + K 1.3954 + + 83 + 1 2.22 46479.3 1.0 118 3257 3375 SUDHL4_400M_050219_2,3377 SUDHL4_400M_050219_2,3377,GTSPPSVEK False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3386 14.172 683.0 64220.0 25 0 13576.0 + 8608 EVDMTCPR 8 70 475.7072550177419 949.3999571022838 2 475.7070190310478 MULTI CID FTMS 0 0 0 3385 81692.6875 0.6298144984017123 -17 0.0885982513427734 1 Unmodified _EVDMTCPR_ REV__ENST00000470907.6_1_2:74760550-74760706:-|nuORF 8.593279151180031 0.7721714526254883 6 QGG 3 -1 11.682 0.0 0.0 1.2305 0.0 0.0 636.2254098384151 68.0512941949828 704.2767040333979 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QGG 1.2305 - 61 + 1 2.22 37746.2 1.0 119 3265 3385 SUDHL4_400M_050219_2,3386 SUDHL4_400M_050219_2,3386,EVDMTCPR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3390 14.19 418.0 162750.0 25 0 26169.0 + -1 IQRLETMK 8 70 517.7865986066354 1033.558644280071 2 517.7865478396416 MULTI CID FTMS 0 0 0 3389 137097.140625 0.00197927587981 -99 0.4861154556274414 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 6 KTT[{I|L}P][WP]K 8 -1 48.932 0.0 0.0 4.7343 0.0 0.0 63.99798277915631 0.0 63.99798277915631 0.0 34.155462488490684 0.0 0.0 0 1.305462187404089 0.0 1.274227503252014 0.25 KTT[{I|L}P][WP]K 4.7343 - 109 + 1 2.22 60022.3 1.0 120 3268 3389 SUDHL4_400M_050219_2,3390 SUDHL4_400M_050219_2,3390,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3392 14.201 500.0 91744.0 25 0 7628.2 10998 GASDTLTGQA 10 80 460.71985944942486 919.4251659656496 2 460.7195007205009 MULTI CID FTMS 0 0 0 3391 127964.1796875 0.2708928709762289 23 -0.0999822616577148 1 Unmodified _GASDTLTGQA_ ENST00000468892.5_1_3:183910449-183911483:+|nuORF 21.74664581756881 0.480091245866545 6 [AG]S{I|L}{I|L}CS 7 6 20.308 0.0 0.0 2.2088 0.0 0.0 0.0 285.11880003987807 285.11880003987807 3.106938726630407 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.2059771852360797 0.0 [AG]S{I|L}{I|L}CS 2.2088 - 173 1 2.22 40865.1 1.0 121 3269 3391 SUDHL4_400M_050219_2,3392 SUDHL4_400M_050219_2,3392,GASDTLTGQA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 3423 14.334 800.0 66075.0 25 0 4580.0 + 44955 YPQFEQSE 8 84 514.221092907492 1026.427632881784 2 514.2204467654228 MULTI CID FTMS 0 0 0 3422 79894.84375 0.2264101334283618 -20 0.0806694030761718 1 Unmodified _YPQFEQSE_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3 20.453626601364224 0.6087503291685402 6 {[ES]|[DT]|[{I|L}C]}[YR]EQSE 8 4 {[ES]|[DT]|[{I|L}C]}[YR]EQ + + 33.029 11.444 1.4443 3.2178 3.2178 51.981 0.0 0.0 0.0 0.0 6.909459342190019 0.0 0.0 0 0.5 0.0 0.7059771852360797 0.0 {[ES]|[DT]|[{I|L}C]}[YR]EQSE 3.2178 - 330 + 1 2.22 46167.7 0.4000000059604645 122 3299 3422 SUDHL4_400M_050219_2,3423 SUDHL4_400M_050219_2,3423,YPQFEQSE False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3433 14.375 305.0 167110.0 25 0 13011.0 + + 37103 GTSPPSVEK 9 90 451.2350385795921 900.4555242259843 2 451.2346374392509 MULTI CID FTMS 0 0 0 3432 221258.625 0.6614187439512438 17 -0.0980062484741211 1 Unmodified _TGSPVPSASV_ ENSG00000181143|ENST00000397910|MUC16 36.12702656103203 0.1984647928738587 6 {[SA]|[TG]}SPPSVEK 9 -1 + 58.592 0.0 0.0 6.507 6.507 94.772 0.0 0.0 0.0 29.6469835964497 12.186673363629552 12.186673363629552 58.59223065793856 0 0.3252574989159953 1.6989700043360187 0.8494850021680094 0.1595680409956017 {[SA]|[TG]}SPPSVEK 6.507 - 102 + 1 2.22 47531.2 1.0 123 3308 3432 SUDHL4_400M_050219_2,3433 SUDHL4_400M_050219_2,3433,TGSPVPSASV False False GTSPPSVEK 14.37455 451.234637439251 3560642.75 3432.0 ENSG00000181143|ENST00000397910|MUC16 6.076324462890625 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3440 14.411 800.0 30576.0 25 0 5335.6 40183 VGPQEYTLL 9 58 510.2751941617931 1018.5358353903862 2 510.2753784060478 MULTI CID FTMS 0 0 0 3439 117443.484375 0.3099196872263189 -51 0.2451820373535156 1 Unmodified _VGPQEYTLL_ ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1 1.844237919475145 0.850302753031785 6 Q 1 8 11.42 0.0 0.0 1.1212 0.0 0.0 872.4650173745644 0.0 872.4650173745644 0.0 5.9354332167857216 0.0 0.0 0 0.0 0.0 0.0 0.0 + Q 1.1212 + + 5 + 1 2.22 25051.6 0.4799999892711639 124 3314 3439 SUDHL4_400M_050219_2,3440 SUDHL4_400M_050219_2,3440,VGPQEYTLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3441 14.425 800.0 40232.0 25 0 2789.4 -1 0 45 753.9911783749258 2258.9517057249773 3 753.9909545779228 MULTI CID FTMS 0 0 0 3439 72937.109375 1.0 0 0.0 2 6 PDVS{[SA]|[TG]}Q 7 -1 36.458 0.0 0.0 1.6139 0.0 0.0 1023.4225091828052 548.1867159479124 1571.6092251307175 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.8494850021680094 PDVS{[SA]|[TG]}Q 1.6139 - 81 + 1 2.22 31595.1 0.3400000035762787 125 3314 3439 SUDHL4_400M_050219_2,3441 SUDHL4_400M_050219_2,3441, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3445 14.437 1.4 34355000.0 25 0 5537200.0 + -1 IQRLETMK 8 74 517.7865986066354 1033.558644280071 2 517.7873412966728 MULTI CID FTMS 0 0 0 3444 36734016.0 0.5303301841738015 -50 0.2567710876464844 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 6 TT[{I|L}P]AE{M(Oxidation (M))|F}K 8 -1 45.896 0.0 0.0 4.4406 0.0 0.0 128.09544570136876 0.0 128.09544570136876 0.0 32.22357194224834 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 TT[{I|L}P]AE{M(Oxidation (M))|F}K 4.4406 - 139 1 2.22 42522.2 1.0 126 3317 3444 SUDHL4_400M_050219_2,3445 SUDHL4_400M_050219_2,3445,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3458 14.496 800.0 153820.0 25 0 29119.0 -1 KIMSMKISS 9 79 528.7771769374342 1055.5398009416683 2 528.7771484255791 MULTI CID FTMS 0 0 0 3457 70487.7109375 0.4839528050877114 -7 0.0272159576416015 1 2 Oxidation (M) _KIM(Oxidation (M))SM(Oxidation (M))KISS_ ENSG00000185842|ENST00000682510|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;nc|ENSG00000185842|Q0VDD8|DNAH14 6.2057823575117 0.6980434486082533 6 R 1 -1 13.099 0.0 0.0 1.241 0.0 0.0 881.4274942783856 0.0 881.4274942783856 0.0 2.302046884880937 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.241 - 13 + 1 2.22 96980.4 0.6000000238418579 127 3329 3457 SUDHL4_400M_050219_2,3458 SUDHL4_400M_050219_2,3458,KIMSMKISS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3472 14.559 800.0 83752.0 25 0 4459.5 -1 EQMFELMK 8 107 544.2427501929499 1086.4709474526996 2 544.2416869997978 MULTI CID FTMS 0 0 0 3471 31912.80078125 0.3094529609872341 -11 0.0426626205444335 1 2 Oxidation (M) _EQM(Oxidation (M))FELM(Oxidation (M))K_ ENSG00000101811|ENST00000372972|CSTF2;ENSG00000177613|ENST00000331173|CSTF2T;nc|ENSG00000101811|P33240-2|CSTF2 4.75600775471527 0.7954636275367004 6 [{I|L}T]T 3 -1 19.044 0.0 0.0 1.7529 0.0 0.0 0.0 768.2675227302965 768.2675227302965 2.8465664177246026 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.2396518287104437 0.0 [{I|L}T]T 1.7529 - 229 1 2.22 57331.6 0.6000000238418579 128 3342 3471 SUDHL4_400M_050219_2,3472 SUDHL4_400M_050219_2,3472,EQMFELMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3476 14.583 800.0 57194.0 25 0 3776.6 + 13719 HQQPPSQQY 9 90 556.7598641475608 1111.5051753619216 2 556.7607910037041 MULTI CID FTMS 0 0 0 3475 68686.2265625 0.2642409963440775 -29 0.1378002166748047 1 Unmodified _HQQPPSQQY_ ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18 72.96794272382148 0.0199516581995792 6 [AG]QHP[PS]QQY 10 3 + 64.714 0.0 0.0 5.8222 5.8222 77.234 0.0 0.0 0.0 8.278611088986423 16.532125137753447 8.278611088986423 0.0443219174010778 0 1.274227503252014 1.6989700043360187 0.9247425010840048 0.566901560044258 [AG]QHP[PS]QQY;[AG]HQP[PS]QQY;[AG]SPPQHQQY;[HQ]QP[PS]QQY;[AG]QHP[PS][AG]QY;[AG]QHP[PS]Q[AG]Y;[AG]HQP[PS][AG]QY;[AG]HQP[PS]Q[AG]Y;QQHP[PS]QQY;[AG]H[AG]P[PS]QQY 5.8222;5.8182;5.2616;5.0774;4.9977;4.9977;4.9937;4.9937;4.8565;4.7585 -;-;-;+;-;-;-;-;-;- + 704 1 2.22 38210.0 0.5899999737739563 129 3345 3475 SUDHL4_400M_050219_2,3476 SUDHL4_400M_050219_2,3476,HQQPPSQQY True True HQQPPSQQY 14.582818 556.760791003704 4339868.0 3475.0 ENSG00000141380|ENST00000415083|SS18;;nc|ENSG00000141380|Q15532-2|SS18 8.959657033284506 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3478 14.595 555.0 103540.0 25 0 7694.4 + 44956 YPQFEQSE 8 86 514.221092907492 1026.427632881784 2 514.2213622927666 MULTI CID FTMS 0 0 0 3477 127880.8125 0.3623952493311224 27 -0.1203241348266601 1 Unmodified _YPQFEQSE_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3 20.453626601364224 0.6087503291685402 6 {[ES]|[DT]|[{I|L}C]}[YR]EQSE 8 4 {[ES]|[DT]|[{I|L}C]}[YR]EQ + + 33.271 11.444 1.4443 3.2415 3.2415 52.042 0.0 0.0 0.0 0.0 13.234002963358408 0.0 0.0 0 0.5 0.0 0.7302046884880937 0.0 {[ES]|[DT]|[{I|L}C]}[YR]EQSE 3.2415 - 287 + 1 2.22 48073.3 1.0 130 3346 3477 SUDHL4_400M_050219_2,3478 SUDHL4_400M_050219_2,3478,YPQFEQSE False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3493 14.653 265.0 55597.0 25 0 6268.2 12959 HAHLDIWK 8 40 510.2751941617931 1018.5358353903862 2 510.2756835818291 MULTI CID FTMS 0 0 0 3492 279704.5625 0.7381077885000751 -5 0.019454002380371 1 Unmodified _HAHLDIWK_ ENSG00000124664|ENST00000374037|SPDEF;nc|ENSG00000124664|O95238-2|SPDEF 0.7936320650641473 0.8195151834710337 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 21589.2 1.0 131 3360 3492 SUDHL4_400M_050219_2,3493 SUDHL4_400M_050219_2,3493,HAHLDIWK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3501 14.684 314.0 262350.0 25 0 149380.0 + 12819 GVTGIEIS 8 57 388.2148151093453 0 388.2148620486259 PEAK CID FTMS 0 0 0 3500 224429.3125 0.6706560108593834 26 -0.1497821807861328 1 Unmodified _GVTGIEIS_ REV__ENSG00000113161|ENST00000287936|HMGCR;REV__ENST00000514315.2_1_5:74655018-74655384:+|nuORF;REV__nc|ENSG00000113161|P04035-2|HMGCR;REV__nc|ENSG00000113161|P04035-3|HMGCR 2.577480529830294 0.5910327097116076 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 69444.3 1.0 132 3367 3500 SUDHL4_400M_050219_2,3501 SUDHL4_400M_050219_2,3501,GVTGIEIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3504 14.692 0.8 57659000.0 25 0 9234800.0 + -1 IQRLETMK 8 62 517.7865986066354 1033.558644280071 2 517.7872192263603 MULTI CID FTMS 0 0 0 3503 63209368.0 0.912555702402634 2 -0.0082960128784179 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 6 T{M(Oxidation (M))|F}K 3 -1 32.536 0.0 0.0 3.148 0.0 0.0 639.3703030708895 0.0 639.3703030708895 0.0 16.684531067637423 0.0 0.0 0 1.0 0.0 0.0 0.2614393726401688 T{M(Oxidation (M))|F}K 3.148 + + 71 + 1 2.22 42410.0 1.0 133 3369 3503 SUDHL4_400M_050219_2,3504 SUDHL4_400M_050219_2,3504,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3518 14.754 800.0 116500.0 25 0 14462.0 -1 0 98 402.2314404822207 401.2241640156207 1 403.2334472537041 MULTI CID FTMS 0 0 0 3517 52375.08203125 0.4171257022885692 -77 0.3835344314575195 1 6 R 1 -1 12.078 0.0 0.0 3.0104 0.0 0.0 227.111628470502 0.0 227.111628470502 0.0 1.8007572389131887 0.0 0.0 0 0.1989700043360188 0.0 0.0 0.0 R 3.0104 - 22 + 1 2.22 73554.0 0.6200000047683716 134 3382 3517 SUDHL4_400M_050219_2,3518 SUDHL4_400M_050219_2,3518, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3522 14.778 800.0 99440.0 25 0 15129.0 + 9769 FNDPNAKEM 9 100 541.2351094370033 1080.4556659408065 2 541.2358886599541 MULTI CID FTMS 0 0 0 3521 101286.96875 0.3876066164456829 -19 0.0902252197265625 1 Oxidation (M) _FNDPNAKEM(Oxidation (M))_ ENSG00000056097|ENST00000265069|ZFR 72.96794272382148 0.0199516581995792 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DPNAKE{M(Oxidation (M))|F} 9 0 + 59.263 0.0 0.0 5.485 5.485 86.642 0.0 0.0 0.0 37.40295303156586 19.88100131276053 19.88100131276053 9.208187539523747 0 1.0 0.0 1.066901560044258 0.0 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DPNAKE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DPGGAKE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DV[QT]DSR;[DN]{M(Oxidation (M))|F}V[QT]DSR;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DP[KS]M{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YYAKE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}D[QT]V[NP]{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QT]DSR;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[KC][QT]DSR;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}M[KS][HC][KS] 5.485;4.6327;3.4651;3.0183;2.6617;2.6134;2.3505;1.627;1.4641;0.4109 +;-;-;-;-;-;-;-;-;- + 441 + 1 2.22 62299.9 0.6299999952316284 135 3385 3521 SUDHL4_400M_050219_2,3522 SUDHL4_400M_050219_2,3522,FNDPNAKEM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3525 14.793 513.0 151100.0 25 0 53557.0 + 30023 QTPARVGC 8 77 416.21011639062897 0 416.2106201052666 PEAK CID FTMS 0 0 0 3524 96537.546875 0.6501173933571344 23 -0.1315851211547851 1 Unmodified _QTPARVGC_ REV__THE1B-int_dup2245|chr8:65979378-65980910:+|2.4889373374620183|0.1233308191720168|4.33|48.0|12|1|sense 6.723162845929126 0.5749384031518959 6 D 1 -1 8.9794 0.0 0.0 1.0813 0.0 0.0 630.2882309728611 82.06698785953358 712.3552188323947 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 D 1.0813 - 33 + 1 2.22 65992.2 1.0 136 3387 3524 SUDHL4_400M_050219_2,3525 SUDHL4_400M_050219_2,3525,QTPARVGC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3531 14.825 800.0 100610.0 25 0 11478.0 + 17521 KPLEIRNQ 8 85 499.2934272788604 996.5723016245208 2 499.2930786013603 MULTI CID FTMS 0 0 0 3530 74542.3203125 0.6324532226461519 -10 0.0707216262817382 1 Unmodified _KPLEIRNQ_ REV__ENSG00000162621|ENST00000294635|LRRC53 26.88365393820708 0.4786498634179528 6 KPT 3 -1 39.041 0.0 0.0 3.9175 0.0 0.0 0.0 667.3538302057249 667.3538302057249 26.082268588648247 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.8807196863200843 0.0 KPT 3.9175 - 58 + 1 2.22 67350.5 0.5099999904632568 137 3392 3530 SUDHL4_400M_050219_2,3531 SUDHL4_400M_050219_2,3531,KPLEIRNQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3533 14.837 561.0 123320.0 25 0 7423.1 + 13720 HQQPPSQQY 9 94 556.7598641475608 1111.5051753619216 2 556.7598754763603 MULTI CID FTMS 0 0 0 3532 167974.296875 0.6462095501207621 19 -0.0963191986083984 1 Unmodified _HQQPPSQQY_ ENSG00000141380|ENST00000415083|SS18;nc|ENSG00000141380|Q15532-2|SS18 88.95385435242217 0.0153473310052057 6 [AG]HQP[PS]QQY 10 3 + 76.925 0.0 0.0 6.9208 6.9208 80.438 0.0 0.0 0.0 12.998037644757048 16.53212513775344 12.998037644757048 0.1849178312658494 0 1.325257498915995 2.0 1.0 0.8600233437409719 [AG]HQP[PS]QQY;[AG]QHP[PS]QQY;[AG]SPPQHQQY;[AG]HQP[PS]Q[AG]Y;[AG]HQP[PS][AG]QY;[AG]QHP[PS]Q[AG]Y;[AG]QHP[PS][AG]QY;[HQ]QP[PS]QQY;[AG]H[AG]P[PS]QQY;QQHP[PS]QQY 6.9208;6.9041;6.1491;6.0962;6.0962;6.0796;6.0796;5.7514;5.665;5.488 -;-;-;-;-;-;-;+;-;- + 1288 1 2.22 58458.8 1.0 138 3393 3532 SUDHL4_400M_050219_2,3533 SUDHL4_400M_050219_2,3533,HQQPPSQQY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3550 14.913 800.0 35815.0 25 0 13101.0 40184 VGPQEYTLL 9 45 510.2751941617931 1018.5358353903862 2 510.2749511599541 MULTI CID FTMS 0 0 0 3549 104835.25 0.2766480240534242 44 -0.2192878723144531 1 Unmodified _VGPQEYTLL_ ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1 1.844237919475145 0.850302753031785 6 {M(Oxidation (M))|F} 1 9 11.594 0.0 0.0 1.1383 0.0 0.0 853.4568386636269 0.0 853.4568386636269 0.0 9.119543704721591 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1383 - 5 + 1 2.22 30212.9 0.4300000071525574 139 3409 3549 SUDHL4_400M_050219_2,3550 SUDHL4_400M_050219_2,3550,VGPQEYTLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3559 14.946 4.1 10235000.0 25 0 1624600.0 + -1 IQRLETMK 8 58 517.7865986066354 1033.558644280071 2 517.7870971560478 MULTI CID FTMS 0 0 0 3558 13293478.0 0.1919183744039959 50 -0.2500057220458984 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 6 T{M(Oxidation (M))|F}K 3 -1 33.174 0.0 0.0 3.2097 0.0 0.0 639.3683892573202 0.0 639.3683892573202 0.0 16.698018647354186 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.25 T{M(Oxidation (M))|F}K 3.2097 + + 56 + 1 2.22 39558.0 1.0 140 3417 3558 SUDHL4_400M_050219_2,3559 SUDHL4_400M_050219_2,3559,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3573 15.011 800.0 73501.0 25 0 3951.9 + 2604 ASNVTNKTD 9 107 496.2383643959821 990.462175858764 2 496.2378417849541 MULTI CID FTMS 0 0 0 3572 122620.84375 0.6478958193121769 -12 0.0482511520385742 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNVTNKTD_ ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC 57.24910588100465 0.0276051374632116 6 EANVTNKTD 9 2 + 80.755 0.0 0.0 8.1532 8.1532 93.11 0.0 0.0 0.0 52.350616251310285 15.296283695593344 15.296283695593344 9.208187539523747 0 1.3494850021680094 0.0 1.2468328665259174 0.0 EANVTNKTD;EAGGVTNKTD;EANVTGGKTD;EAGGVTGGKTD;[WQ]V[HD]{[VA]|[{I|L}G]}H;[WQ]V[HN][NP]P 8.1532;7.2236;7.2236;6.2983;1.5137;0.71815 -;-;-;-;-;- 660 + 1 2.22 49862.7 0.4799999892711639 141 3430 3572 SUDHL4_400M_050219_2,3573 SUDHL4_400M_050219_2,3573,ASNVTNKTD True False ASNVTNKTD 15.010832 496.237841784954 644514.75 3572.0 nc|ENSG00000092199|P07910-3|HNRNPC;;nc|ENSG00000092199|P07910-4|HNRNPC;;ENSG00000092199|ENST00000553300|HNRNPC;;nc|ENSG00000092199|P07910|HNRNPC 8.03325621287028 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3581 15.042 237.0 359800.0 25 0 57765.0 17297 KLRENQLPR 9 90 385.2321823378761 1152.6747176138283 3 385.2314941287041 MULTI CID FTMS 0 0 0 3580 152827.75 0.7391731759812338 9 -0.0530834197998046 1 Unmodified _KLRENQLPR_ ENSG00000099817|ENST00000615234|POLR2E;ENST00000586817.5_1_19:1089487-1094188:-|nuORF 6.2057823575117 0.6980434486082533 6 K{I|L} 2 7 22.717 0.0 0.0 1.9708 0.0 0.0 0.0 908.4702403489212 908.4702403489212 12.120593102324566 0.0 0.0 0.0 0 0.1747425010840047 0.0 0.0 0.0 + K{I|L} 1.9708 + + 23 + 1 2.22 74477.6 1.0 142 3437 3580 SUDHL4_400M_050219_2,3581 SUDHL4_400M_050219_2,3581,KLRENQLPR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3582 15.056 800.0 132830.0 25 0 10658.0 + 1240 AIKDKQVKY 9 119 364.8853588511298 1091.6342471535895 3 364.8853637576103 MULTI CID FTMS 0 0 0 3580 86621.484375 0.3512988859305105 -18 0.0847682952880859 2 Unmodified _AIKDKQVKY_ ENSG00000185787|ENST00000426013|MORF4L1;ENST00000433352.1_1_X:64550801-64551062:-|nuORF;ENST00000557961.5_1_15:79165359-79178570:+|nuORF;ENST00000558522.5_1_15:79165359-79183469:+|nuORF;ENST00000558539.5_1_15:79170271-79178570:+|nuORF;ENST00000558893.5_1_15:79165359-79184661:+|nuORF;ENST00000559619.5_1_15:79165359-79179692:+|nuORF;ENST00000561171.5_1_15:79170562-79187198:+|nuORF;nc|ENSG00000185787|Q9UBU8|MORF4L1 49.55428908609986 0.0413471690215031 6 A{I|L}KDKQVKY 9 0 + 72.507 0.0 0.0 6.642 6.642 95.29 0.0 0.0 0.0 57.32931433837626 12.94917177197476 12.94917177197476 72.50660200798058 0 0.8569758080123702 1.6989700043360187 0.0 1.0114393726401687 + + A{I|L}KDKQVKY 6.642 + + 319 + 1 2.22 86785.8 0.7699999809265137 143 3437 3580 SUDHL4_400M_050219_2,3582 SUDHL4_400M_050219_2,3582,AIKDKQVKY True True AIKDKQVKY 15.055848 364.88536375761 942636.25 3580.0 ENST00000557961.5_1_15:79165359-79178570:+|nuORF;;ENST00000433352.1_1_X:64550801-64551062:-|nuORF;;ENST00000559619.5_1_15:79165359-79179692:+|nuORF;;ENSG00000185787|ENST00000426013|MORF4L1;;ENST00000558522.5_1_15:79165359-79183469:+|nuORF;;nc|ENSG00000185787|Q9UBU8|MORF4L1;;ENST00000561171.5_1_15:79170562-79187198:+|nuORF;;ENST00000558539.5_1_15:79170271-79178570:+|nuORF;;ENST00000558893.5_1_15:79165359-79184661:+|nuORF 3.82235829035441 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3599 15.133 800.0 79308.0 25 0 26010.0 18755 LALTLTLFQ 9 74 510.309352014121 1018.604151095042 2 510.3091003298759 MULTI CID FTMS 0 0 0 3598 55540.57421875 0.6282861502599685 1 -0.0226068496704101 1 Unmodified _LALTLTLFQ_ ENSG00000153956|ENST00000356860|CACNA2D1;nc|ENSG00000153956|P54289-3|CACNA2D1;nc|ENSG00000153956|P54289-4|CACNA2D1;nc|ENSG00000153956|P54289-5|CACNA2D1;nc|ENSG00000153956|P54289|CACNA2D1 4.75600775471527 0.7486543447549536 6 K 1 9 5.4846 0.0 0.0 0.53844 0.0 0.0 201.1475766393866 686.3391817682249 887.4867584076114 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.53844 - 10 + 1 2.22 52580.7 0.4099999964237213 144 3453 3598 SUDHL4_400M_050219_2,3599 SUDHL4_400M_050219_2,3599,LALTLTLFQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3600 15.139 345.0 183280.0 25 0 31152.0 + 33427 SHVVVKND 8 79 470.2481921270144 938.4818313208287 2 470.2472106814384 MULTI CID FTMS 0 0 0 3598 215127.578125 0.8219915814933273 -8 0.0321617126464843 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SHVVVKND_ ENSG00000067048|ENST00000336079|DDX3Y;ENST00000493363.1_1_Y:15016814-15021353:+|nuORF;nc|ENSG00000067048|O15523-3|DDX3Y 89.40071534611396 0.0508339161556384 6 EHVVVKND 8 1 + 85.136 0.0 0.0 9.0717 9.0717 96.182 0.0 0.0 0.0 66.55661659352981 13.047444008242906 13.047444008242906 12.75698788007091 0 1.924742501084005 1.2218487496163564 0.0 1.5356668758921828 EHVVVKND;EHVVVKGGD;{[YC]|[HE]}VVV[QT]Q;[HV]EVV[QT]Q;[HV]VEV[QT]Q;DDKVV[HV]Q 9.0717;7.7123;6.0329;5.0294;3.3039;0.31479 -;-;-;-;-;- 163 + 1 2.22 53441.7 1.0 145 3453 3598 SUDHL4_400M_050219_2,3600 SUDHL4_400M_050219_2,3600,SHVVVKND True False SHVVVKND 15.138833 470.247210681438 949790.5 3598.0 ENSG00000067048|ENST00000336079|DDX3Y;;ENST00000493363.1_1_Y:15016814-15021353:+|nuORF;;nc|ENSG00000067048|O15523-3|DDX3Y 10.7266419728597 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3616 15.2 55.0 975550.0 25 0 165250.0 + -1 IQRLETMK 8 65 517.7865986066354 1033.558644280071 2 517.7868530154228 MULTI CID FTMS 0 0 0 3615 1056611.75 0.0152543382127808 101 -0.5469970703125 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 6 T{M(Oxidation (M))|F}K 3 -1 34.079 0.0 0.0 3.2972 0.0 0.0 639.3698147896395 0.0 639.3698147896395 0.0 23.28205902846762 0.0 0.0 0 1.0 0.0 0.0 0.2396518287104437 T{M(Oxidation (M))|F}K 3.2972 + + 80 + 1 2.22 45653.2 1.0 146 3468 3615 SUDHL4_400M_050219_2,3616 SUDHL4_400M_050219_2,3616,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3629 15.255 433.0 138580.0 25 0 31231.0 + 2009 APARPAPAA 9 81 411.23570556790327 820.4568582026066 2 411.2355834841728 MULTI CID FTMS 0 0 0 3628 72823.3359375 0.4962561131040034 -23 0.0936174392700195 1 Unmodified _APARPAPAA_ REV__ENSG00000125533|ENST00000612929|BHLHE23;REV__nc|ENSG00000125533|Q8NDY6|BHLHE23 21.74664581756881 0.2544899275067181 6 [PA]{[QV]|[N{I|L}]|[RA]|[KV]}PAPAA 9 -1 + 30.172 0.0 0.0 3.6775 3.6775 78.77 0.0 0.0 0.0 9.409999832893591 17.073551726139357 9.409999832893591 8.010299956639813 0 0.6069758080123702 1.3010299956639813 0.0 0.0 [PA]{[QV]|[N{I|L}]|[RA]|[KV]}PAPAA;[PA]{[QV]|[N{I|L}]|[RA]|[KV]}PPAAA;[PA]{[QV]|[N{I|L}]|[RA]|[KV]}[HK]AA 3.6775;2.7012;0.72695 +;-;- + 40 1 2.22 52264.3 1.0 147 3480 3628 SUDHL4_400M_050219_2,3629 SUDHL4_400M_050219_2,3629,APARPAPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3643 15.32 800.0 68662.0 25 0 9670.7 -1 0 37 509.6279169460253 2543.1032023971266 5 509.6273986697197 MULTI CID FTMS 0 0 0 3642 37997.71484375 0.4416335376192886 1 -0.0163555145263671 1 6 D 1 -1 5.4846 0.0 0.0 0.21566 0.0 0.0 872.3259329652891 1552.72262284741 2425.0485558127 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.21566 - 3 + 1 2.22 51127.7 0.3899999856948852 148 3493 3642 SUDHL4_400M_050219_2,3643 SUDHL4_400M_050219_2,3643, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3648 15.348 800.0 89504.0 25 0 4520.2 -1 0 50 636.7824041157107 2543.1005105964427 4 637.2842285037041 MULTI CID FTMS 0 0 0 3647 40253.7734375 0.4169630938091964 -2 0.0079822540283203 1 6 DN 2 -1 18.583 0.0 0.0 0.73074 0.0 0.0 744.334474827578 1566.6947387926955 2311.029213620274 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 DN 0.73074 - 10 + 1 2.22 58839.3 0.3499999940395355 149 3497 3647 SUDHL4_400M_050219_2,3648 SUDHL4_400M_050219_2,3648, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3655 15.384 800.0 105940.0 25 0 5875.0 36297 SYINIEGITAT 11 124 394.5387504111308 1180.5944218335924 3 394.5388976931572 MULTI CID FTMS 0 0 0 3654 64490.94140625 0.4090807117220167 -31 0.155766487121582 1 Unmodified _SYINIEGITAT_ ENSG00000214944|ENST00000513042|ARHGEF28;nc|ENSG00000214944|Q8N1W1-2|ARHGEF28;nc|ENSG00000214944|Q8N1W1-3|ARHGEF28;nc|ENSG00000214944|Q8N1W1-4|ARHGEF28;nc|ENSG00000214944|Q8N1W1-5|ARHGEF28;nc|ENSG00000214944|Q8N1W1-6|ARHGEF28 4.11662792887243 0.8557254166428417 6 PVPT{M(Oxidation (M))|F}K 6 10 15.157 0.0 0.0 1.2838 0.0 0.0 493.2320693939424 0.0 493.2320693939424 0.0 3.736638942263559 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.1307196863200844 PVPT{M(Oxidation (M))|F}K 1.2838 - 162 + 1 2.22 72155.7 0.4099999964237213 150 3503 3654 SUDHL4_400M_050219_2,3655 SUDHL4_400M_050219_2,3655,SYINIEGITAT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3656 15.398 800.0 100260.0 25 0 14667.0 + -1 KRRWNMMK 8 75 591.3043031988432 1180.5940534644865 2 591.3046752810478 MULTI CID FTMS 0 0 0 3654 84467.0078125 0.520286340479093 -27 0.1396741867065429 2 2 Oxidation (M) _KRRWNM(Oxidation (M))M(Oxidation (M))K_ REV__ENST00000344293.5_1_10:7866412-8006047:+|nuORF 12.531546534597751 0.7257836412119636 6 T{M(Oxidation (M))|F}K[HV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 8 -1 29.117 0.0 0.0 2.4663 0.0 0.0 128.0953541486344 0.0 128.0953541486344 0.0 10.920919034428705 0.0 0.0 0 0.7429928190999391 0.0 0.3807196863200844 0.0 T{M(Oxidation (M))|F}K[HV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q 2.4663 - 208 1 2.22 66082.9 0.3799999952316284 151 3503 3654 SUDHL4_400M_050219_2,3656 SUDHL4_400M_050219_2,3656,KRRWNMMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3659 15.412 426.0 105230.0 25 0 8602.8 + 32154 RVQEGNESY 9 90 541.2503334193012 1080.4861139054024 2 541.2508422732353 MULTI CID FTMS 0 0 0 3658 100123.453125 0.38566782533311 -17 0.1193180084228515 1 Unmodified _RVQEGNESY_ ENSG00000105369|ENST00000221972|CD79A 49.55428908609986 0.0413471690215031 6 [RV]QEGNESY 9 0 + 73.51 0.0 0.0 6.8034 6.8034 90.484 0.0 0.0 0.0 4.137342758552691 61.16674631049834 4.137342758552691 9.208187539523747 0 1.0 0.0 0.3494850021680094 1.1421590589602533 + + [RV]QEGNESY;[RV][AG]EGNESY;[RV]QEGGGESY;[RV]QEGNTDY;[RV][AG]EGGGESY;[RV]QEGGGTDY;[RV][AG]EGNTDY;[RV][AG]EGGGTDY;{[{M(Oxidation (M))|F}C]|[YS]}[PA][HK]ESY;{[{M(Oxidation (M))|F}C]|[YS]}[PA][HK]TDY 6.8034;5.9512;5.9512;5.7097;5.103;4.8575;4.8575;4.0093;3.115;2.0212 +;-;-;-;-;-;-;-;-;- + 341 1 2.22 38498.3 1.0 152 3505 3658 SUDHL4_400M_050219_2,3659 SUDHL4_400M_050219_2,3659,RVQEGNESY True True RVQEGNESY 15.412473 541.250842273235 1235092.125 3658.0 ENSG00000105369|ENST00000221972|CD79A 7.11917241414388 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3670 15.454 11.0 4786800.0 25 0 719620.0 + -1 IQRLETMK 8 76 517.7867601603277 1033.5589673874554 2 517.7869140505791 MULTI CID FTMS 0 0 0 3669 5092379.5 0.9658859228065808 -2 0.0079450607299804 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 6 KTT[{I|L}P][WP]K 8 -1 52.686 0.0 0.0 5.0975 0.0 0.0 63.99887447715111 0.0 63.99887447715111 0.0 37.909686104016686 0.0 0.0 0 1.6421590589602533 0.0 1.274227503252014 0.2887254899964357 KTT[{I|L}P][WP]K 5.0975 - 59 + 1 2.22 45247.7 1.0 153 3515 3669 SUDHL4_400M_050219_2,3670 SUDHL4_400M_050219_2,3670,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3684 15.52 800.0 95268.0 25 0 11851.0 + -1 VQIAWLTMK 9 89 553.305385411799 1104.5962178903978 2 553.3047973513603 MULTI CID FTMS 0 0 0 3683 80378.359375 0.4610976336121106 -26 0.1379508972167968 1 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 16.149105407346934 0.3995459350917656 6 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 40.876 0.0 0.0 3.7005 3.7005 78.993 0.0 0.0 0.0 0.4305997461732147 24.05667695090241 0.4305997461732147 8.266062568876713 0 1.0 0.0 0.7742275032520141 0.0 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]T{M(Oxidation (M))|F}K;{[DS]|[MA]|[CV]|TT}K[PA]A{I|L}E{M(Oxidation (M))|F}K;{[DS]|[MA]|[CV]|TT}KAAP{I|L}E{M(Oxidation (M))|F}K;[KT]T[{I|L}P][RD]{M(Oxidation (M))|F}K;{[DS]|[MA]|[CV]|TT}K[{I|L}P]AAE{M(Oxidation (M))|F}K;{[DS]|[MA]|[CV]|TT}K[{I|L}P][RD]{M(Oxidation (M))|F}K;[KT][RD][{I|L}P]GV[YG];[KT]T[PA]A{I|L}T[R{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]GV[YG] 3.7005;2.9522;2.6861;2.3259;2.2709;2.1139;1.7951;1.2122;0.46783;0.46382 -;-;-;-;-;-;-;-;-;- 329 1 2.22 62672.9 0.3899999856948852 154 3528 3683 SUDHL4_400M_050219_2,3684 SUDHL4_400M_050219_2,3684,VQIAWLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3708 15.625 800.0 36094.0 25 0 11086.0 -1 0 20 1189.4714371701643 3565.392482110693 3 1189.805712878704 MULTI CID FTMS 0 0 0 3707 42296.4453125 0.2054009775880748 -7 0.0282831192016601 1 6 E 1 -1 6.9897 0.0 0.0 0.19604 0.0 0.0 2909.164862245699 524.1644991510374 3433.3293613967367 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19604 - 2 + 1 2.22 36381.4 0.2899999916553497 155 3551 3707 SUDHL4_400M_050219_2,3708 SUDHL4_400M_050219_2,3708, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3710 15.641 800.0 124160.0 25 0 8219.6 + 10296 FRSVTPRDGF 10 121 394.5387504111308 1180.5944218335924 3 394.5384399294853 MULTI CID FTMS 0 0 0 3709 102485.1875 0.6500868576156541 18 -0.1215906143188476 1 Unmodified _FRSVTPRDGF_ REV__ENSG00000135870|ENST00000367696|RC3H1;REV__nc|ENSG00000135870|Q5TC82-2|RC3H1 8.444304893310646 0.6875766406947869 6 P{I|L}{M(Oxidation (M))|F} 3 -1 17.945 0.0 0.0 1.52 0.0 0.0 429.24098052675487 391.15329919986567 820.3942797266205 0.0 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 P{I|L}{M(Oxidation (M))|F} 1.52 - 270 + 1 2.22 83177.4 0.4199999868869781 156 3552 3709 SUDHL4_400M_050219_2,3710 SUDHL4_400M_050219_2,3710,FRSVTPRDGF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3712 15.658 800.0 92396.0 25 0 10359.0 + -1 KRRWNMMK 8 80 591.3043031988432 1180.5940534644865 2 591.3043090701103 MULTI CID FTMS 0 0 0 3711 95349.0859375 0.5873160216657629 23 -0.1692104339599609 1 2 Oxidation (M) _KRRWNM(Oxidation (M))M(Oxidation (M))K_ REV__ENST00000344293.5_1_10:7866412-8006047:+|nuORF 7.910154910731844 0.7763180056447161 6 T{M(Oxidation (M))|F}K[HV]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 8 -1 33.148 0.0 0.0 2.8078 0.0 0.0 128.09504897285314 0.0 128.09504897285314 0.0 19.16895006820745 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K[HV]{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 2.8078 - 140 1 2.22 64106.1 0.4399999976158142 157 3553 3711 SUDHL4_400M_050219_2,3712 SUDHL4_400M_050219_2,3712,KRRWNMMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3715 15.678 800.0 80001.0 25 0 4398.6 + 12206 GQTGSGKTF 9 104 441.7194161956016 881.4242794580033 2 441.7190734744072 MULTI CID FTMS 0 0 0 3714 95436.859375 0.7056280802120133 -10 0.0774765014648437 1 Unmodified _GQTGSGKTF_ chr3:44778191-44780885|28|14.18|0.86|4.05|+|1|KIF15,KIF15|1;ENSG00000163808|ENST00000326047|KIF15;ENSG00000164627|ENST00000287152|KIF6;ENSG00000237649|ENST00000428849|KIFC1;ENST00000481166.6_1_3:44803368-44835731:+|nuORF;nc|ENSG00000163808|Q9NS87-2|KIF15;nc|ENSG00000163808|Q9NS87-4|KIF15;nc|ENSG00000164627|Q6ZMV9-3|KIF6 43.77239144664712 0.0547478964384323 6 {[QG]|[NA]}TGP 5 5 31.54 0.0 0.0 3.5783 0.0 0.0 0.0 438.19529138736567 438.19529138736567 15.89977144241652 0.0 0.0 0.0 0 1.064909327626439 0.619788758288394 0.0 0.0 {[QG]|[NA]}TGP 3.5783 - 240 + 1 2.22 52094.0 0.4600000083446502 158 3555 3714 SUDHL4_400M_050219_2,3715 SUDHL4_400M_050219_2,3715,GQTGSGKTF True True GQTGSGKTF 15.678184 441.719073474407 615533.875 3714.0 ENSG00000164627|ENST00000287152|KIF6;;ENSG00000163808|ENST00000326047|KIF15;;ENSG00000237649|ENST00000428849|KIFC1;;chr3:44778191-44780885|28|14.18|0.86|4.05|+|1|KIF15,KIF15|1;;ENST00000481166.6_1_3:44803368-44835731:+|nuORF;;nc|ENSG00000163808|Q9NS87-4|KIF15;;nc|ENSG00000163808|Q9NS87-2|KIF15;;nc|ENSG00000164627|Q6ZMV9-3|KIF6 4.390047947565715 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3722 15.711 587.0 101520.0 25 0 11504.0 + 34554 SPESLPSSQ 9 83 466.2227243336414 930.4308957340828 2 466.2222778201103 MULTI CID FTMS 0 0 0 3721 91259.1484375 0.6275631072864162 -9 0.0734033584594726 1 Unmodified _SPESLPSSQ_ REV__ENSG00000166272|ENST00000448841|WBP1L;REV__nc|ENSG00000166272|Q9NX94|WBP1L 39.957323273325 0.0756908302845263 6 [PS][{I|L}T]DPSQS 9 -1 + 40.414 0.0 0.0 4.3435 4.3435 85.449 0.0 0.0 0.0 7.87787469514015 23.38019718488278 7.87787469514015 15.713337517843655 0 0.5440228147639203 0.8239087409443188 1.1382104921644451 0.0 [PS][{I|L}T]DPSQS;[VG]{[QN]|[E{I|L}]|[KN]}DPSQS;[AG]S[PS][RN]GW;[VG]{[QN]|[E{I|L}]|[KN]}DRGW 4.3435;2.6547;0.79799;0.78007 -;-;-;- 119 1 2.22 54700.6 1.0 159 3561 3721 SUDHL4_400M_050219_2,3722 SUDHL4_400M_050219_2,3722,SPESLPSSQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3724 15.718 251.0 266270.0 25 0 37157.0 3214 AWLFQLEK 8 86 517.7867601603277 1033.5589673874554 2 517.7867309451103 MULTI CID FTMS 0 0 0 3723 248898.5 0.0472092775798963 45 -0.2896881103515625 1 Unmodified _AWLFQLEK_ ENST00000311956.8_1_11:46700310-46700529:-|nuORF 23.1484247019978 0.5573009939494978 6 KTT[{I|L}P][WP]K 8 7 51.036 0.0 0.0 4.9379 0.0 0.0 63.998297284470205 0.0 63.998297284470205 0.0 37.17949822148904 0.0 0.0 0 1.6861818737241734 0.0 1.3494850021680094 0.3054621874040891 KTT[{I|L}P][WP]K 4.9379 - 99 + 1 2.22 57917.7 1.0 160 3562 3723 SUDHL4_400M_050219_2,3724 SUDHL4_400M_050219_2,3724,AWLFQLEK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 3734 15.768 800.0 72056.0 25 0 19928.0 + -1 SRQFSSRSG 9 78 527.2577187571669 1052.5008845811335 2 527.2579833865166 MULTI CID FTMS 0 0 0 3733 59293.27734375 0.6424567530110956 1 -0.0177021026611328 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SRQFSSRSG_ P04264;ENSG00000167768|ENST00000252244|KRT1 8.97624648632007 0.6013279508813512 6 {[RE]|[WV]}Q{M(Oxidation (M))|F} 4 -1 18.667 0.0 0.0 1.7736 0.0 0.0 0.0 489.2052401178344 489.2052401178344 14.062755376215978 0.0 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 {[RE]|[WV]}Q{M(Oxidation (M))|F} 1.7736 - 34 + 1 2.22 52891.3 0.4099999964237213 161 3571 3733 SUDHL4_400M_050219_2,3734 SUDHL4_400M_050219_2,3734,SRQFSSRSG False False SRQFSSRSG 15.768333 527.257983386517 313744.46875 3733.0 P04264;;ENSG00000167768|ENST00000252244|KRT1 3.445055509606997 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3736 15.785 800.0 122110.0 25 0 12261.0 + -1 VQIAWLTMK 9 106 553.305385411799 1104.5962178903978 2 553.3055908083916 MULTI CID FTMS 0 0 0 3735 113684.234375 0.6521597586330067 18 -0.1634044647216797 1 Oxidation (M) _VQIAWLTM(Oxidation (M))K_ REV__ENSG00000107147|ENST00000371757|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-2|KCNT1;REV__nc|ENSG00000107147|Q5JUK3-4|KCNT1;REV__nc|ENSG00000107147|Q5JUK3|KCNT1 18.1463463914782 0.3454829746528889 6 [KT][RD][{I|L}P]TTK 9 -1 40.145 0.0 0.0 3.6344 0.0 0.0 0.0 60.9756921187608 60.9756921187608 18.64389316659686 0.0 0.0 0.0 0 1.5 0.0 1.5021934810768762 0.0 [KT][RD][{I|L}P]TTK 3.6344 - 278 1 2.22 78216.8 0.4300000071525574 162 3572 3735 SUDHL4_400M_050219_2,3736 SUDHL4_400M_050219_2,3736,VQIAWLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3737 15.799 800.0 102630.0 25 0 16818.0 + 35495 STMSTNGIPR 10 104 532.2628675536546 1062.511182174109 2 532.2633544802666 MULTI CID FTMS 0 0 0 3735 92808.6875 1.0 0 0.0 2 Unmodified _STMSTNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 70.33199760932243 0.018925923965799 6 {[MG]|[TS]}MSTNG{I|L}RP 10 2 + 69.206 0.0 0.0 6.5134 6.5134 84.727 0.0 0.0 0.0 7.269987279362624 3.979400086720375 3.979400086720375 3.979400086720375 0 0.7742275032520141 0.0 0.3494850021680094 0.7614393726401688 {[MG]|[TS]}MSTNG{I|L}RP;{[MG]|[TS]}MSTNG{I|L}PR;{[MG]|[TS]}MSTGGG{I|L}RP;{[MG]|[TS]}MSTGGG{I|L}PR;[VG][RD]KTSDW;{[MG]|[TS]}MSVV{[{M(Oxidation (M))|F}H]|[RQ]}R;AA{[RE]|[WV]}KTSDW;{[MG]|[TS]}[RN]VVSDW;{[MG]|[TS]}M{[RE]|[WV]}{[{M(Oxidation (M))|F}H]|[RQ]}R;{[MG]|[TS]}M[{I|L}V][YN][HV] 6.5134;6.1389;5.6509;5.2764;2.3016;2.2775;2.1138;1.8516;1.6678;1.3338 -;+;-;-;-;-;-;-;-;- + 261 + 1 2.22 66662.8 0.4000000059604645 163 3572 3735 SUDHL4_400M_050219_2,3737 SUDHL4_400M_050219_2,3737,STMSTNGIPR True True STMSTNGIPR 15.798539 532.263354480267 393545.03125 3735.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 8.12123171488444 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 3747 15.847 800.0 108520.0 25 0 12992.0 + 38873 TVKDSRTVY 9 81 534.7881934279461 1067.561833922692 2 534.7877075076103 MULTI CID FTMS 0 0 0 3746 97763.109375 0.5234890922882224 -7 0.0280961990356445 1 Unmodified _TVKDSRTVY_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 32.037481411007896 0.1235546156350648 6 TVKD 4 5 65.433 0.0 0.0 6.1292 0.0 0.0 0.0 621.2997782120117 621.2997782120117 46.141303353600094 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.4247425010840047 + TVKD 6.1292 + + 61 + 1 2.22 71259.2 0.4099999964237213 164 3581 3746 SUDHL4_400M_050219_2,3747 SUDHL4_400M_050219_2,3747,TVKDSRTVY True True TVKDSRTVY 15.84707 534.78770750761 854560.25 3746.0 nc|ENSG00000166226|P78371-2|CCT2;;ENSG00000166226|ENST00000299300|CCT2 5.840891202290853 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3750 15.868 800.0 91807.0 25 0 5781.7 -1 NYWLRCCMHRW 11 75 820.8549203149254 1639.695287696651 2 821.3571044802666 MULTI CID FTMS 0 0 0 3749 111428.0546875 0.327125833021409 -27 0.1729040145874023 1 Carbamidomethyl (C),Oxidation (M) _NYWLRC(Carbamidomethyl (C))CM(Oxidation (M))HRW_ ENSG00000146221|ENST00000371505|TCTE1 0.0 0.8751479354844584 6 EEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGGAE 12 -1 66.54 0.0 0.0 4.058 0.0 0.0 331.1366241359852 0.0 331.1366241359852 0.0 28.42532961713691 0.0 0.0 0 0.8182503180159344 0.0 2.920818753952375 0.0 EEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QGGAE 4.058 - 2368 + 1 2.22 54949.7 0.4000000059604645 165 3583 3749 SUDHL4_400M_050219_2,3750 SUDHL4_400M_050219_2,3750,NYWLRCCMHRW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3751 15.881 800.0 101370.0 25 0 17806.0 + 31943 RVDKNAPTV 9 93 500.28355612185976 998.5525593105197 2 500.2835571169853 MULTI CID FTMS 0 0 0 3749 95821.3984375 0.7972209964506031 -8 0.0446405410766601 2 Unmodified _RVDKNAPTV_ ENSG00000102879|ENST00000219150|CORO1A;ENST00000568982.5_1_16:30195026-30198313:+|nuORF;ENST00000569469.1_1_16:30195026-30198371:+|nuORF 28.49450938151212 0.1686335738423394 6 V{M(Oxidation (M))|F}PR[PS]VTP 9 7 + 72.627 0.0 0.0 7.2732 7.2732 94.218 0.0 0.0 0.0 31.73470971777453 15.256534898888155 15.256534898888155 15.256534898888155 0 0.5 1.6989700043360187 1.610924374808178 0.0 V{M(Oxidation (M))|F}PR[PS]VTP;V{M(Oxidation (M))|F}PR[PS]PTV;V{[WT]|[RM]}{I|L}[PS]PTV;V{[WT]|[RM]}{I|L}[PS]VTP;V{M(Oxidation (M))|F}P[HK][TA]TV;{[QD]|[EN]|[WG]|[KD]|[RS]}[RV]NAPTV;[VP]{[HG]|PP}[HK]PEV 7.2732;5.7454;4.4309;4.2573;2.4593;1.6972;0.42681 -;-;-;-;-;-;- 214 + 1 2.22 65750.7 0.4099999964237213 166 3583 3749 SUDHL4_400M_050219_2,3751 SUDHL4_400M_050219_2,3751,RVDKNAPTV False True RVDKNAPTV 15.881335 500.283557116985 558173.375 3749.0 ENST00000568982.5_1_16:30195026-30198313:+|nuORF;;chr16:30183725-30186598|15|20.67|0.24|6.45|+|0|CORO1A,CORO1A|1;;ENST00000569469.1_1_16:30195026-30198371:+|nuORF;;ENSG00000102879|ENST00000219150|CORO1A 6.409919579823812 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3753 15.898 800.0 37514.0 25 0 11833.0 -1 0 21 1189.4714371701643 3565.392482110693 3 1190.139941394329 MULTI CID FTMS 0 0 0 3752 89214.75 0.3432578991782903 16 -0.0912456512451171 1 6 G 1 -1 6.9897 0.0 0.0 0.19604 0.0 0.0 2146.749572271057 1358.5983534151703 3505.3479256862274 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19604 - 1 + 1 2.22 33940.6 0.4399999976158142 167 3584 3752 SUDHL4_400M_050219_2,3753 SUDHL4_400M_050219_2,3753, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3754 15.912 800.0 90927.0 25 0 6919.4 + 27289 PHIFDCLLSAN 11 93 615.3040383265396 1228.5935237198792 2 615.3043090701103 MULTI CID FTMS 0 0 0 3752 119229.8828125 0.5156418841322344 -21 0.1628742218017578 2 Unmodified _PHIFDCLLSAN_ REV__ENST00000424710.5_1_7:120496852-120497216:-|nuORF 31.26834338654808 0.3580123756476716 6 DP[WK]PSQSAN 10 -1 78.203 0.0 0.0 6.3652 0.0 0.0 100.0641117780289 0.0 100.0641117780289 0.0 51.357580297878926 0.0 0.0 0 1.5 0.0 2.8243923658886185 0.0 DP[WK]PSQSAN 6.3652 - 541 1 2.22 58172.8 0.4399999976158142 168 3584 3752 SUDHL4_400M_050219_2,3754 SUDHL4_400M_050219_2,3754,PHIFDCLLSAN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3769 15.969 37.0 1305800.0 25 0 180580.0 + -1 IQRLETMK 8 64 517.7868859214288 1033.5592189096576 2 517.7867919802666 MULTI CID FTMS 0 0 0 3768 1471202.25 0.9447165553665616 -6 0.0242061614990234 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 6 KTT[{I|L}P][WP]K 8 -1 44.262 0.0 0.0 4.2825 0.0 0.0 63.99882143951999 0.0 63.99882143951999 0.0 26.63786753388136 0.0 0.0 0 1.3494850021680094 0.0 0.8494850021680094 0.2887254899964357 KTT[{I|L}P][WP]K 4.2825 - 116 + 1 2.22 41837.1 1.0 169 3598 3768 SUDHL4_400M_050219_2,3769 SUDHL4_400M_050219_2,3769,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3785 16.041 800.0 110450.0 25 0 14146.0 -1 KSPIRETMK 9 96 553.3054008383871 1104.596248743574 2 553.3052245974541 MULTI CID FTMS 0 0 0 3784 99995.3203125 0.573845901535271 -32 0.194406509399414 1 Oxidation (M) _KSPIRETM(Oxidation (M))K_ ENSG00000151849|ENST00000381884|CENPJ;nc|ENSG00000151849|Q9HC77-2|CENPJ 23.78978130925829 0.2284941198415988 6 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 44.912 0.0 0.0 4.0659 4.0659 83.883 0.0 0.0 0.0 0.7378621416091846 13.016500751245577 0.7378621416091846 12.04628427264403 0 1.5 0.0 1.1549471895720984 0.0 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K;{[CT]|[{M(Oxidation (M))|F}G]}A[KP][{I|L}P]T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]TT{[CA]|SS};[KT][RD][{I|L}P]GV[YG];[PS]KST[{I|L}P]R[YG];[KT]T[{I|L}P][RD]{M(Oxidation (M))|F}K;[PS]KST[{I|L}P]GYR;{[CT]|[{M(Oxidation (M))|F}G]}A[KP][{I|L}P]GV[YG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KP][{I|L}P]GV[YG] 4.0659;2.9754;2.9729;2.5712;2.2709;2.1542;1.9278;1.6924;1.1843;1.1779 -;-;-;-;-;-;-;-;-;- 426 1 2.22 72710.8 0.4699999988079071 170 3613 3784 SUDHL4_400M_050219_2,3785 SUDHL4_400M_050219_2,3785,KSPIRETMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3792 16.078 800.0 98341.0 25 0 16349.0 + 37675 TLMWSLPSK 9 80 531.7847408722963 1061.5549288113923 2 531.7843505740166 MULTI CID FTMS 0 0 0 3791 58274.2109375 0.2903031925376996 -52 0.3270902633666992 1 Unmodified _TLMWSLPSK_ REV__ENST00000282397.8_1_13:28979936-29001362:-|nuORF 20.453626601364224 0.2830276176381075 6 AE{M(Oxidation (M))|F}K 4 -1 27.696 0.0 0.0 2.609 0.0 0.0 568.3228016584 0.0 568.3228016584 0.0 13.716459608685485 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 AE{M(Oxidation (M))|F}K 2.609 - 79 1 2.22 64551.5 0.449999988079071 171 3619 3791 SUDHL4_400M_050219_2,3792 SUDHL4_400M_050219_2,3792,TLMWSLPSK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3800 16.108 144.0 253530.0 25 0 22966.0 -1 NYWLRCCMHRW 11 52 820.8549203149254 1639.695287696651 2 820.8555175662041 MULTI CID FTMS 0 0 0 3799 398989.1875 0.9485985762760272 17 -0.0949134826660156 1 Carbamidomethyl (C),Oxidation (M) _NYWLRC(Carbamidomethyl (C))CM(Oxidation (M))HRW_ ENSG00000146221|ENST00000371505|TCTE1 0.0 0.8751479354844584 6 [EP]AEQ[QA][EP]AEQGQE 15 -1 + 63.055 0.0 0.0 3.8455 3.8455 72.458 0.0 0.0 0.0 1.249387366082999 2.8816456785509104 1.249387366082999 1.249387366082999 0 1.6989700043360187 0.0 0.8494850021680094 0.0 [EP]AEQ[QA][EP]AEQGQE;{[CP]|[EA]}PEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQE[WE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}QNAE;[EP]AY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AEQGQE;{[CP]|[EA]}PY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AEQGQE;{[CP]|[EA]}PY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WE]EQGQE;[EP]AY{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[WE]EQ[WQ] 3.8455;3.7693;3.6698;3.2631;3.0918;3.0156;2.609;2.086 -;-;-;-;-;-;-;- 317 1 2.22 33298.7 1.0 172 3626 3799 SUDHL4_400M_050219_2,3800 SUDHL4_400M_050219_2,3800,NYWLRCCMHRW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3805 16.136 800.0 69982.0 25 0 9212.3 -1 EKKLQNTMK 9 79 568.3106261664249 1134.6066993996496 2 568.3113281130791 MULTI CID FTMS 0 0 0 3804 62534.1171875 0.2102089145502649 -41 0.1922531127929687 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 22.736283301280096 0.2418982879461534 6 T{M(Oxidation (M))|F}K 3 -1 34.169 0.0 0.0 3.0115 0.0 0.0 740.4183581904684 0.0 740.4183581904684 0.0 18.891208547781773 0.0 0.0 0 1.0 0.0 0.0 0.2742275032520141 T{M(Oxidation (M))|F}K 3.0115 + + 128 + 1 2.22 47000.8 0.4199999868869781 173 3630 3804 SUDHL4_400M_050219_2,3805 SUDHL4_400M_050219_2,3805,EKKLQNTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3816 16.189 800.0 106820.0 25 0 31314.0 + + 38777 SLDTQPKKV 9 104 508.2935977346193 1014.5726425360386 2 508.2940856814384 MULTI CID FTMS 0 0 0 3815 83927.5859375 0.4881016174592363 -11 0.05694580078125 1 Unmodified _TVDIRTLPT_ ENSG00000071564|ENST00000262965|TCF3;nc|ENSG00000071564|P15923-2|TCF3;nc|ENSG00000071564|P15923-3|TCF3 18.1463463914782 0.3454829746528889 6 {[TV]|[{I|L}S]}D 3 -1 36.879 0.0 0.0 3.6349 0.0 0.0 0.0 696.4104097955686 696.4104097955686 21.060333777879485 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 {[TV]|[{I|L}S]}D 3.6349 + + 294 + 1 2.22 70287.1 0.4199999868869781 174 3640 3815 SUDHL4_400M_050219_2,3816 SUDHL4_400M_050219_2,3816,TVDIRTLPT False False SLDTQPKKV 16.189154 508.294085681438 1020379.6875 3815.0 ENSG00000071564|ENST00000262965|TCF3;;nc|ENSG00000071564|P15923-2|TCF3;;nc|ENSG00000071564|P15923-3|TCF3 4.008485237757365 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3825 16.225 251.0 215670.0 25 0 31316.0 + -1 IQRLETMK 8 70 517.7868859214288 1033.5592189096576 2 517.7866699099541 MULTI CID FTMS 0 0 0 3824 189709.84375 0.1218201169190902 44 -0.2699928283691406 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 6 T{M(Oxidation (M))|F}K 3 -1 32.224 0.0 0.0 3.1177 0.0 0.0 639.3710913235233 0.0 639.3710913235233 0.0 11.025684359364403 0.0 0.0 0 1.0 0.0 0.0 0.2302046884880938 T{M(Oxidation (M))|F}K 3.1177 + + 79 + 1 2.22 47049.9 1.0 175 3648 3824 SUDHL4_400M_050219_2,3825 SUDHL4_400M_050219_2,3825,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3840 16.285 327.0 159640.0 25 0 22199.0 -1 IIPLVMEMK 9 68 553.3054008383871 1104.596248743574 2 553.3054687380791 MULTI CID FTMS 0 0 0 3839 144848.421875 0.8312456320661445 17 -0.1410961151123047 1 2 Oxidation (M) _IIPLVM(Oxidation (M))EM(Oxidation (M))K_ ENSG00000168356|ENST00000302328|SCN11A;nc|ENSG00000168356|Q9UI33-2|SCN11A;nc|ENSG00000168356|Q9UI33-3|SCN11A 21.74664581756881 0.2544899275067181 6 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 44.995 0.0 0.0 4.0735 4.0735 86.57 0.0 0.0 0.0 1.935749724493121 31.892653074926045 1.935749724493121 40.92355294484548 0 1.805462187404089 0.0 0.3807196863200844 0.0 [KT][RD][{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[PA]A{I|L}T[R{M(Oxidation (M))|F}];[KT][RD][RH][RH] 4.0735;0.36863;0.10356 -;-;- 119 1 2.22 43079.1 1.0 176 3662 3839 SUDHL4_400M_050219_2,3840 SUDHL4_400M_050219_2,3840,IIPLVMEMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3845 16.313 800.0 54877.0 25 0 5634.6 7462 EGPKETPSSAN 11 81 558.7622781619131 1115.510003390626 2 558.7622558474541 MULTI CID FTMS 0 0 0 3844 76819.8125 0.5397988551336891 -8 0.0364246368408203 1 Unmodified _EGPKETPSSAN_ ENSG00000151929|ENST00000369085|BAG3 28.49450938151212 0.4231428536161201 6 {[DA]|[EG]}[{I|L}V]DPSQSAN 11 5 + 79.149 0.0 0.0 7.0953 7.0953 93.279 0.0 0.0 0.0 10.088422267289118 57.46639837922589 10.088422267289118 12.623348264491083 0 1.0 1.0969100130080565 1.3494850021680094 0.3494850021680094 {[DA]|[EG]}[{I|L}V]DPSQSAN;{[DA]|[EG]}[{I|L}V]DPS[AG]SAN;{[QD]|[EN]|[WG]|[KD]|[RS]}[WK][HM]SAN 7.0953;5.9637;3.2161 -;-;- 169 1 2.22 38423.2 0.4199999868869781 177 3666 3844 SUDHL4_400M_050219_2,3845 SUDHL4_400M_050219_2,3845,EGPKETPSSAN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3848 16.33 593.0 157060.0 25 0 19352.0 + 37676 TLMWSLPSK 9 88 531.7847408722963 1061.5549288113923 2 531.7842285037041 MULTI CID FTMS 0 0 0 3847 192011.0 0.9565364404871952 -3 0.0243167877197265 1 Unmodified _TLMWSLPSK_ REV__ENST00000282397.8_1_13:28979936-29001362:-|nuORF 15.847184025352805 0.4077185912009129 6 KTE[{I|L}P][WP]K 8 -1 25.411 0.0 0.0 2.3938 0.0 0.0 63.99982355947595 0.0 63.99982355947595 0.0 12.875240784723374 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.6549471895720984 KTE[{I|L}P][WP]K 2.3938 - 255 + 1 2.22 74233.6 1.0 178 3668 3847 SUDHL4_400M_050219_2,3848 SUDHL4_400M_050219_2,3848,TLMWSLPSK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3851 16.342 204.0 361890.0 25 0 92210.0 + 27319 PHPHGREALPV 11 63 403.8879360486972 1208.6419787462914 3 403.8873474001884 MULTI CID FTMS 0 0 0 3850 151153.4375 0.078046303795751 -31 0.1656723022460937 1 Unmodified _PHPHGREALPV_ ENST00000400451.6_1_22:20760237-20760540:+|nuORF 6.723162845929126 0.8434276150410019 6 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 9 34.098 0.0 0.0 2.8212 0.0 0.0 0.0 394.22042305012553 394.22042305012553 23.15552802072581 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 2.8212 - 63 + 1 2.22 60886.9 1.0 179 3670 3850 SUDHL4_400M_050219_2,3851 SUDHL4_400M_050219_2,3851,PHPHGREALPV False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 3855 16.366 800.0 87629.0 25 0 9457.8 + + 28757 RVQEGNESY 9 93 541.741222244477 1081.4678915557538 2 541.7411376833916 MULTI CID FTMS 0 0 0 3854 87871.4609375 0.4046268832294324 -6 0.0367469787597656 1 Carbamidomethyl (C) _PWAWLC(Carbamidomethyl (C))SY_ ENSG00000105369|ENST00000221972|CD79A 42.96799951952854 0.1846367511955703 6 [RV]QEGDESY 9 -1 + 64.887 0.0 0.0 5.9999 5.9999 86.25 0.0 0.0 0.0 4.762036441594191 57.8976719887757 4.762036441594191 8.010299956639813 0 1.0 0.0 0.3807196863200844 0.4247425010840047 [RV]QEGDESY;[RV]QEGDTDY;[RV][AG]EGDESY;[RV][AG]EGDTDY;[VP][DP]N[YQ]SY;{[{M(Oxidation (M))|F}C]|[YS]}[YK]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DY 5.9999;5.2592;5.1485;4.4078;2.156;1.7977 -;-;-;-;-;- 234 1 2.22 57219.8 0.4399999976158142 180 3673 3854 SUDHL4_400M_050219_2,3855 SUDHL4_400M_050219_2,3855,PWAWLCSY False False RVQEGNESY 16.366475 541.741137683392 0.0 3854.0 ENSG00000105369|ENST00000221972|CD79A 5.710086027781169 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3857 16.383 800.0 63001.0 25 0 5717.3 -1 NYWLRCCMHRW 11 71 820.8549203149254 1639.695287696651 2 820.8543578982353 MULTI CID FTMS 0 0 0 3856 60007.50390625 0.142668108697424 65 -0.3962936401367187 1 Carbamidomethyl (C),Oxidation (M) _NYWLRC(Carbamidomethyl (C))CM(Oxidation (M))HRW_ ENSG00000146221|ENST00000371505|TCTE1 0.0 0.8751479354844584 6 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE 14 -1 + 79.677 0.0 0.0 4.8592 4.8592 80.077 0.0 0.0 0.0 55.45502919002999 10.21144069483583 10.21144069483583 4.937879028767824 0 0.242992819099939 0.0 2.004432191740108 0.7059771852360797 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{M(Oxidation (M))|F}QNAE;[EP]APNS{[SA]|[TG]}[EP]AEQGQE;{[CP]|[EA]}PPNS{[SA]|[TG]}[EP]AEQGQE;[EP]AEQ[QA][EP]AEQGQE;{[CP]|[EA]}PEQ[QA][EP]AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQ{M(Oxidation (M))|F}KWEEQNAE;{[CP]|[EA]}PY{M(Oxidation (M))|F}Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AEQGQE;{[CP]|[EA]}PE[HT]A{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AEQGQE;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GQEA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AQ[HA][Y{M(Oxidation (M))|F}];{[QG]|[NA]}Q[YT]SA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AEQ[WQ] 4.8592;4.5581;4.3745;4.2711;4.0875;3.4849;3.1571;3.0782;3.0035;2.9264 -;-;-;-;-;-;-;-;-;- 1292 + 1 2.22 39075.2 0.3799999952316284 181 3674 3856 SUDHL4_400M_050219_2,3857 SUDHL4_400M_050219_2,3857,NYWLRCCMHRW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3859 16.392 359.0 218980.0 25 0 35137.0 -1 EKKLQNTMK 9 74 568.3106261664249 1134.6066993996496 2 568.3108398318291 MULTI CID FTMS 0 0 0 3858 250079.421875 0.8406438946932089 4 -0.0348587036132812 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 6 T{M(Oxidation (M))|F}K 3 -1 41.682 0.0 0.0 3.6737 0.0 0.0 740.4168620626414 0.0 740.4168620626414 0.0 18.50447842314608 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.6737 + + 112 1 2.22 64109.2 1.0 182 3675 3858 SUDHL4_400M_050219_2,3859 SUDHL4_400M_050219_2,3859,EKKLQNTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3860 16.406 800.0 128380.0 25 0 11791.0 + -1 TIHIFRIMY 9 75 605.3279571868612 1208.6413614405224 2 605.3286010622978 MULTI CID FTMS 0 0 0 3858 100360.8125 0.3083172856716742 -19 0.1302814483642578 2 Oxidation (M) _TIHIFRIM(Oxidation (M))Y_ REV__ENST00000316660.6_1_18:57570359-57570470:+|nuORF 16.942295170755138 0.3780752226737986 6 [{I|L}T]HPP 5 -1 31.783 0.0 0.0 2.6297 0.0 0.0 0.0 660.3237896140029 660.3237896140029 23.824543621168388 0.0 0.0 0.0 0 1.5 0.0 0.6861818737241735 0.0 [{I|L}T]HPP 2.6297 - 191 1 2.22 81025.7 0.4099999964237213 183 3675 3858 SUDHL4_400M_050219_2,3860 SUDHL4_400M_050219_2,3860,TIHIFRIMY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3872 16.462 800.0 22609.0 25 0 6121.4 -1 0 23 1054.077193334091 3159.209750602472 3 1054.417163074017 MULTI CID FTMS 0 0 0 3871 20453.259765625 0.2741590034249753 1 -0.0164051055908203 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 31326.5 0.3100000023841858 184 3686 3871 SUDHL4_400M_050219_2,3872 SUDHL4_400M_050219_2,3872, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3876 16.479 347.0 176590.0 25 0 23708.0 37371 TKSTVNKWA 9 71 517.786870397463 1033.5591878617258 2 517.7867309451103 MULTI CID FTMS 0 0 0 3875 167141.46875 0.6102122674579326 21 -0.1259498596191406 1 Unmodified _TKSTVNKWA_ nc|ENSG00000114742|Q8TAF3-5|WDR48 20.453626601364224 0.2830276176381075 6 T{M(Oxidation (M))|F}K 3 7 32.137 0.0 0.0 3.1093 0.0 0.0 639.3724335666071 0.0 639.3724335666071 0.0 16.920141535679704 0.0 0.0 0 1.0 0.0 0.0 0.2215141619232908 T{M(Oxidation (M))|F}K 3.1093 - 108 + 1 2.22 53709.8 1.0 185 3689 3875 SUDHL4_400M_050219_2,3876 SUDHL4_400M_050219_2,3876,TKSTVNKWA False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 3886 16.527 782.0 92830.0 25 0 7305.4 + 26460 NTIDPSHPM 9 95 514.2292048825 1026.4438568317998 2 514.2291747927666 MULTI CID FTMS 0 0 0 3885 76812.6875 0.3325564681669283 -17 0.0856056213378906 1 Oxidation (M) _NTIDPSHPM(Oxidation (M))_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 71.13359017698441 0.0206607516130725 6 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}DR{M(Oxidation (M))|F} 8 4 + 64.805 0.0 0.0 6.3136 6.3136 83.426 0.0 0.0 0.0 41.65122871044118 6.102434403821633 6.102434403821633 3.30652530802702 0 0.6549471895720985 2.0 0.6747425010840047 0.0 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}DR{M(Oxidation (M))|F};{[QS]|[NT]}{I|L}DPSHP{M(Oxidation (M))|F};{[QS]|[NT]}{I|L}{[QG]|[NA]}N{[MS]|[{M(Oxidation (M))|F}A]}Y;{[QS]|[NT]}{[{M(Oxidation (M))|F}D]|MM}{I|L}DR{M(Oxidation (M))|F};{[QS]|[NT]}{I|L}[WM]{[CP]|[EA]}Y;{[QS]|[NT]}[YE][TP]R{M(Oxidation (M))|F} 6.3136;5.9915;3.9546;3.6478;2.8147;1.7356 -;+;-;-;-;- + 254 + 1 2.22 64341.8 1.0 186 3698 3885 SUDHL4_400M_050219_2,3886 SUDHL4_400M_050219_2,3886,NTIDPSHPM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3892 16.56 800.0 103320.0 25 0 16841.0 + 40173 VGPGLGWAASV 11 85 507.2723335407286 1012.5301141482572 2 507.2719909548759 MULTI CID FTMS 0 0 0 3891 92956.9453125 0.6782274673913564 -15 0.0771770477294921 1 Unmodified _VGPGLGWAASV_ REV__ENST00000396465.5_1_8:74204990-74206187:-|nuORF 17.11289562659939 0.6791789249425932 6 V[PG]G 4 -1 24.693 0.0 0.0 2.4387 0.0 0.0 0.0 699.3420619134264 699.3420619134264 10.713337517843655 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 V[PG]G 2.4387 + + 50 + 1 2.22 68496.3 0.4199999868869781 187 3703 3891 SUDHL4_400M_050219_2,3892 SUDHL4_400M_050219_2,3892,VGPGLGWAASV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3899 16.596 800.0 82231.0 25 0 8629.4 -1 0 70 396.42479592023176 1977.0875972681588 5 396.4242431521416 MULTI CID FTMS 0 0 0 3898 41574.13671875 0.4084958946522972 -13 0.0765724182128906 1 6 ERP{I|L}SDHE 8 -1 59.027 0.0 0.0 2.9856 0.0 0.0 0.0 1010.6232036860932 1010.6232036860932 41.55320604342912 0.0 0.0 0.0 0 0.9386218330464624 0.0 0.8494850021680094 0.0 ERP{I|L}SDHE 2.9856 - 54 + 1 2.22 56618.8 0.8299999833106995 188 3709 3898 SUDHL4_400M_050219_2,3899 SUDHL4_400M_050219_2,3899, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3901 16.601 33.0 1503000.0 25 0 128110.0 + 27297 PHLEPLHNPR 10 69 403.8879360486972 1208.6419787462914 3 403.8877136111259 MULTI CID FTMS 0 0 0 3900 1225220.5 0.6326282282517193 9 -0.0725688934326171 1 Unmodified _PHLEPLHNPR_ REV__ENSG00000242715|ENST00000239859|CCDC169;REV__nc|ENSG00000242715|A6NNP5-5|CCDC169 7.289230182591677 0.6929195370588109 6 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 6 -1 35.418 0.0 0.0 2.9304 0.0 0.0 0.0 394.2207430475219 394.2207430475219 24.648415687162952 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]EH 2.9304 - 116 + 1 2.22 43605.1 1.0 189 3710 3900 SUDHL4_400M_050219_2,3901 SUDHL4_400M_050219_2,3901,PHLEPLHNPR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3902 16.613 664.0 57128.0 25 0 5469.3 + -1 CCSSQSCCPN 10 83 573.1782862765341 0 573.1776611208916 PEAK CID FTMS 0 0 0 3900 117718.578125 1.0 0 0.0 2 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))C(Carbamidomethyl (C))SSQSCCPN_ REV__ENSG00000241598|ENST00000399682|KRTAP5-4;REV__ENSG00000244411|ENST00000398536|KRTAP5-7;REV__nc|ENSG00000241598|Q6L8H1|KRTAP5-4 5.296884461304476 0.3961065659209837 6 S 1 -1 4.3618 0.0 0.0 0.38116 0.0 0.0 943.2807993823666 111.00906549625232 1054.289864878619 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 S 0.38116 + + 6 + 1 2.22 36304.7 1.0 190 3710 3900 SUDHL4_400M_050219_2,3902 SUDHL4_400M_050219_2,3902,CCSSQSCCPN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3909 16.648 737.0 56518.0 25 0 3391.7 + 17894 KQPDNSPEY 9 85 539.2463496437902 1076.4781463543802 2 539.2458373904228 MULTI CID FTMS 0 0 0 3908 73777.0546875 0.6325709785466264 -17 0.1057052612304687 1 Unmodified _KQPDNSPEY_ ENSG00000180098|ENST00000373830|TRNAU1AP;ENST00000464093.1_1_1:28887839-28891347:+|nuORF;ENST00000484775.1_1_1:28887181-28904036:+|nuORF;ENST00000491577.5_1_1:28887839-28904145:+|nuORF 32.30548876998284 0.1201446275138228 6 TM[EP]Y 5 6 39.749 0.0 0.0 3.6925 0.0 0.0 437.229014129574 0.0 437.229014129574 0.0 17.77692445103522 0.0 0.0 0 1.3494850021680094 0.0 0.6421590589602533 0.0 TM[EP]Y 3.6925 - 104 + 1 2.22 40161.8 1.0 191 3716 3908 SUDHL4_400M_050219_2,3909 SUDHL4_400M_050219_2,3909,KQPDNSPEY True True KQPDNSPEY 16.64842 539.245837390423 744008.1875 3908.0 ENST00000464093.1_1_1:28887839-28891347:+|nuORF;;ENST00000491577.5_1_1:28887839-28904145:+|nuORF;;ENSG00000180098|ENST00000373830|TRNAU1AP;;ENST00000484775.1_1_1:28887181-28904036:+|nuORF 5.6051375071207685 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3911 16.665 800.0 158750.0 25 0 13767.0 19235 LEHQRDRQK 9 85 605.3279571868612 1208.6413614405224 2 605.3277465701103 MULTI CID FTMS 0 0 0 3910 130946.6875 0.4022797967851939 23 -0.1255397796630859 1 Unmodified _LEHQRDRQK_ ENSG00000185352|ENST00000376705|HS6ST3 17.11289562659939 0.3734572693229295 6 [{I|L}T]HPPEH 7 7 39.073 0.0 0.0 3.2328 0.0 0.0 0.0 394.2196444147094 394.2196444147094 23.270694719097943 0.0 0.0 0.0 0 1.274227503252014 0.0 0.0 0.0 [{I|L}T]HPPEH 3.2328 - 182 + 1 2.22 95428.8 0.550000011920929 192 3717 3910 SUDHL4_400M_050219_2,3911 SUDHL4_400M_050219_2,3911,LEHQRDRQK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3914 16.684 634.0 74004.0 25 0 10107.0 -1 EKKLQNTMK 9 75 568.3106261664249 1134.6066993996496 2 568.3107787966728 MULTI CID FTMS 0 0 0 3913 76367.3984375 0.2567095955707094 48 -0.2259120941162109 1 Oxidation (M) _EKKLQNTM(Oxidation (M))K_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000480467.5_1_9:123151516-123165527:-|nuORF;ENST00000484546.1_1_9:123151516-123165527:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 26.268140514670165 0.1969607489560049 6 T{M(Oxidation (M))|F}K 3 -1 41.682 0.0 0.0 3.6737 0.0 0.0 740.418260642775 0.0 740.418260642775 0.0 20.0 0.0 0.0 0 1.3494850021680094 0.0 0.5 0.0 T{M(Oxidation (M))|F}K 3.6737 + + 181 1 2.22 40613.9 1.0 193 3719 3913 SUDHL4_400M_050219_2,3914 SUDHL4_400M_050219_2,3914,EKKLQNTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3926 16.73 212.0 279940.0 25 0 40639.0 + -1 IQRLETMK 8 72 517.7869087000633 1033.5592644669266 2 517.7869140505791 MULTI CID FTMS 0 0 0 3925 263532.15625 0.4461444218436806 -28 0.1843299865722656 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 6 KTT[{I|L}P][WP]K 8 -1 44.857 0.0 0.0 4.34 0.0 0.0 63.999364336428535 0.0 63.999364336428535 0.0 33.64516253185087 0.0 0.0 0 1.424742501084005 0.0 1.3494850021680094 0.25 KTT[{I|L}P][WP]K 4.34 - 187 + 1 2.22 50905.2 1.0 194 3730 3925 SUDHL4_400M_050219_2,3926 SUDHL4_400M_050219_2,3926,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3936 16.774 487.0 158180.0 25 0 10045.0 + 26461 NTIDPSHPM 9 108 514.2292048825 1026.4438568317998 2 514.2297241091728 MULTI CID FTMS 0 0 0 3935 209368.78125 0.9064510656122298 24 -0.1158943176269531 1 Oxidation (M) _NTIDPSHPM(Oxidation (M))_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 61.357469665136826 0.0253304979873734 6 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}DR{M(Oxidation (M))|F} 8 4 + 71.525 0.0 0.0 6.9682 6.9682 92.556 0.0 0.0 0.0 51.82258126592544 9.71971276399757 9.71971276399757 11.13113446143054 0 0.6694451763165201 2.0 0.6694451763165201 0.0 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}DR{M(Oxidation (M))|F};{[QS]|[NT]}{I|L}DPSHP{M(Oxidation (M))|F};{[QS]|[NT]}{[{M(Oxidation (M))|F}D]|MM}{I|L}DR{M(Oxidation (M))|F};{[QS]|[NT]}[YE][TP]R{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}D]|MM}WW{I|L}N{M(Oxidation (M))|F};[VP]D[HA]D{I|L}N{M(Oxidation (M))|F};[VP]DD[HA]{I|L}N{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}]GHH{I|L}N{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[YQ]D{I|L}N{M(Oxidation (M))|F} 6.9682;5.8838;4.5832;2.2868;1.0647;0.6542;0.57706;0.078508;0.033929 -;+;-;-;-;-;-;-;- + 396 + 1 2.22 64054.2 1.0 195 3739 3935 SUDHL4_400M_050219_2,3936 SUDHL4_400M_050219_2,3936,NTIDPSHPM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3949 16.835 800.0 17649.0 25 0 1331.8 -1 0 32 733.0675241775535 2928.240990843814 4 733.3189575076103 MULTI CID FTMS 0 0 0 3948 12512.404296875 0.1811163449591631 1 -0.0163688659667968 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.22 20673.2 0.3000000119209289 196 3751 3948 SUDHL4_400M_050219_2,3949 SUDHL4_400M_050219_2,3949, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3966 16.911 800.0 83039.0 25 0 15480.0 + 37794 TLSGHSQEV 9 91 479.23590186299145 956.4572507927828 2 479.2364379763603 MULTI CID FTMS 0 0 0 3965 70412.390625 0.4590542697237327 -9 0.0360488891601562 1 Unmodified _TLSGHSQEV_ ENSG00000117399|ENST00000310955|CDC20;ENST00000488829.1_1_9:89626569-89628063:+|nuORF 18.1463463914782 0.3454829746528889 6 [{I|L}T][{M(Oxidation (M))|F}V]QSG 7 6 35.679 0.0 0.0 3.7303 0.0 0.0 0.0 221.0682772272094 221.0682772272094 21.69933211002821 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.7742275032520141 0.0 [{I|L}T][{M(Oxidation (M))|F}V]QSG 3.7303 - 151 + 1 2.22 57167.4 0.4199999868869781 197 3767 3965 SUDHL4_400M_050219_2,3966 SUDHL4_400M_050219_2,3966,TLSGHSQEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3975 16.956 800.0 139760.0 25 0 26815.0 + 30076 QVDHADGLEK 10 88 556.2727219042466 1110.5308908752932 2 556.2728759646416 MULTI CID FTMS 0 0 0 3974 106100.3125 0.2050036886305525 -8 0.0446395874023437 1 Unmodified _QVDHADGLEK_ REV__ENSG00000163492|ENST00000443758|CCDC141;REV__nc|ENSG00000163492|Q6ZP82-1|CCDC141 49.52724829834842 0.0829255630816734 6 [DV]QHVDAAEK 10 -1 + 114.06 0.0 0.0 10.271 10.271 88.894 0.0 0.0 0.0 20.569326514825462 16.53212513775344 16.53212513775344 3.481362441963327 0 3.305462187404089 1.3010299956639813 0.8609243748081782 1.079689690656103 [DV]QHVDAAEK;[DV]HQVDAAEK;[DV]HAGVDAAEK;[DV][AG]HVDAAEK;[HV]DQVDAAEK;[HV]DAGVDAAEK;[DV]HAAEAAAEK;GG{NN|[MP]|[D{I|L}]|[EV]}HVDAAEK;[DV]QHVD[VS]{[NV]|[RG]};{[CP]|[EA]}AAHVDAAEK 10.271;9.9577;8.9482;8.4737;8.419;7.4095;7.3827;6.7846;6.1713;6.0835 -;-;-;-;-;-;-;-;-;- 1219 1 2.22 92054.8 0.5 198 3775 3974 SUDHL4_400M_050219_2,3975 SUDHL4_400M_050219_2,3975,QVDHADGLEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3976 16.967 637.0 117510.0 25 0 56846.0 -1 0 64 472.2730143670384 471.2657379004384 1 472.2733947634697 MULTI CID FTMS 0 0 0 3974 95547.765625 0.6564829204382323 45 -0.3515472412109375 2 6 {I|L} 1 -1 12.218 0.0 0.0 2.5927 0.0 0.0 340.1709025506321 0.0 340.1709025506321 0.0 2.303654192657465 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.5927 - 14 + 1 2.22 62379.4 1.0 199 3775 3974 SUDHL4_400M_050219_2,3976 SUDHL4_400M_050219_2,3976, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3979 16.987 800.0 89267.0 25 0 7145.8 + 14336 IERDGTESY 9 90 535.2441770611384 1068.4738011890768 2 535.2440673708916 MULTI CID FTMS 0 0 0 3978 46694.5703125 0.4715022195351436 1 -0.0407447814941406 1 Unmodified _IERDGTESY_ ENSG00000166851|ENST00000300093|PLK1;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENST00000564794.1_1_16:23700038-23701081:+|nuORF 24.881564428377168 0.2146028316269493 6 VHESY 5 6 43.672 0.0 0.0 4.0873 0.0 0.0 435.1949635236344 0.0 435.1949635236344 0.0 8.712725460977346 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 VHESY 4.0873 - 202 1 2.22 59708.0 0.4300000071525574 200 3777 3978 SUDHL4_400M_050219_2,3979 SUDHL4_400M_050219_2,3979,IERDGTESY False True IERDGTESY 16.987351 535.244067370892 360489.1875 3978.0 ENST00000564794.1_1_16:23700038-23701081:+|nuORF;;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;;ENSG00000166851|ENST00000300093|PLK1 6.464064915974935 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3980 16.998 599.0 140170.0 25 0 21607.0 + -1 LTGWPLTMK 9 95 531.7847758511125 1061.554998769025 2 531.7843505740166 MULTI CID FTMS 0 0 0 3978 99096.359375 0.3863929770203976 -18 0.108367919921875 2 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 29.081581746732265 0.1611639662936252 6 KTTH[RP]MK 8 -1 56.046 0.0 0.0 5.2796 0.0 0.0 63.99904738980246 0.0 63.99904738980246 0.0 40.82900060949935 0.0 0.0 0 1.6861818737241734 0.0 1.305462187404089 0.5774509799928715 KTTH[RP]MK 5.2796 - 428 + 1 2.22 71860.6 1.0 201 3777 3978 SUDHL4_400M_050219_2,3980 SUDHL4_400M_050219_2,3980,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3981 17.012 800.0 113590.0 25 0 19864.0 + 28054 PPDAPPSKNK 10 95 525.783980598283 1049.553408263366 2 525.7837402224541 MULTI CID FTMS 0 0 0 3978 92474.9921875 0.6324253402716616 -3 0.0356369018554687 3 Unmodified _PPDAPPSKNK_ REV__ENSG00000156970|ENST00000287598|BUB1B;REV__nc|ENSG00000156970|O60566-2|BUB1B;REV__nc|ENSG00000156970|O60566-3|BUB1B 17.11289562659939 0.5604042439455784 6 T{I|L}P[WP]K 6 -1 47.184 0.0 0.0 4.4957 0.0 0.0 309.13566117127374 0.0 309.13566117127374 0.0 38.87009080640347 0.0 0.0 0 1.8807196863200843 0.0 0.4247425010840047 0.3494850021680094 T{I|L}P[WP]K 4.4957 - 79 + 1 2.22 75910.6 0.4199999868869781 202 3777 3978 SUDHL4_400M_050219_2,3981 SUDHL4_400M_050219_2,3981,PPDAPPSKNK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3983 17.029 800.0 96201.0 25 0 28145.0 + -1 IQRLETMK 8 80 517.7869087000633 1033.5592644669266 2 517.7868530154228 MULTI CID FTMS 0 0 0 3982 59151.77734375 0.10014047575666 20 -0.1303997039794922 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 13.90604991867851 0.7054780292895731 6 KTT[{I|L}P][WP]K 8 -1 41.005 0.0 0.0 3.9674 0.0 0.0 63.99884437362977 0.0 63.99884437362977 0.0 25.827731244245346 0.0 0.0 0 0.805462187404089 0.0 0.8494850021680094 0.2059771852360797 KTT[{I|L}P][WP]K 3.9674 - 134 + 1 2.22 67003.7 0.6000000238418579 203 3778 3982 SUDHL4_400M_050219_2,3983 SUDHL4_400M_050219_2,3983,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3984 17.043 800.0 130430.0 25 0 19114.0 + 27478 PKGLAPKW 8 102 448.7694755090205 895.524398084841 2 448.7691833376884 MULTI CID FTMS 0 0 0 3982 114192.8046875 1.0 0 0.0 2 Unmodified _PKGLAPKW_ REV__ENSG00000124827|ENST00000379491|GCM2 13.50788311687929 0.7113601687236069 6 KPG 3 -1 35.445 0.0 0.0 3.9581 0.0 0.0 0.0 610.3288057916624 610.3288057916624 20.84121882396211 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 KPG 3.9581 - 76 + 1 2.22 87533.5 0.9800000190734864 204 3778 3982 SUDHL4_400M_050219_2,3984 SUDHL4_400M_050219_2,3984,PKGLAPKW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 3986 17.05 246.0 206570.0 25 0 17402.0 -1 NTIDPSHPM 9 79 514.2293654641234 1026.4441779950466 2 514.2295410037041 MULTI CID FTMS 0 0 0 3985 276556.4375 0.9976866690130668 -4 0.1038265228271484 1 Oxidation (M) _NTIDPSHPM(Oxidation (M))_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 26.88365393820708 0.1891292719743517 6 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}] 8 -1 + 57.695 0.0 0.0 5.6208 5.6208 88.641 0.0 0.0 0.0 41.76477176880759 4.6040937697618745 4.6040937697618745 10.753800256993957 0 0.3807196863200844 2.0 0.3252574989159953 0.0 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}D[PS]H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QS]|[NT]}{[{M(Oxidation (M))|F}D]|MM}{I|L}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}[YE][TP][R{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}D]|MM}WW{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{NN|[MP]|[D{I|L}]|[EV]}[YQ]D{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 5.6208;4.5732;3.4064;1.7722;0.99817;0.22815 -;+;-;-;-;- + 207 + 1 2.22 46483.1 1.0 205 3779 3985 SUDHL4_400M_050219_2,3986 SUDHL4_400M_050219_2,3986,NTIDPSHPM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 3990 17.075 800.0 101330.0 25 0 11870.0 -1 0 50 509.5343900716923 2034.1084544203693 4 509.7848693728447 MULTI CID FTMS 0 0 0 3989 75859.59375 0.2547805456328746 -21 0.1875972747802734 1 6 [{I|L}T][Y{I|L}]TS 6 -1 17.113 0.0 0.0 0.8413 0.0 0.0 0.0 1352.7136539655444 1352.7136539655444 1.1439372640168737 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T][Y{I|L}]TS 0.8413 - 34 1 2.22 71185.1 0.4300000071525574 206 3782 3989 SUDHL4_400M_050219_2,3990 SUDHL4_400M_050219_2,3990, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3993 17.086 236.0 199750.0 25 0 39889.0 -1 0 63 407.8288258060361 2034.1077466971808 5 408.0293151736259 MULTI CID FTMS 0 0 0 3992 196346.0 0.4438379740819395 -17 0.1839828491210937 1 6 ERP{I|L}SDHE 8 -1 52.384 0.0 0.0 2.5753 0.0 0.0 0.0 1067.646731476085 1067.646731476085 47.779419084123234 0.0 0.0 0.0 0 0.6989700043360187 0.0 0.4247425010840047 0.0 ERP{I|L}SDHE 2.5753 - 45 + 1 2.22 44848.9 1.0 207 3784 3992 SUDHL4_400M_050219_2,3993 SUDHL4_400M_050219_2,3993, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 3997 17.102 299.0 241700.0 25 0 94675.0 -1 0 66 448.2363384847338 447.22906201813385 1 448.2357055544853 MULTI CID FTMS 0 0 0 3996 163463.171875 0.5818002856491076 -19 0.1827030181884765 1 6 {M(Oxidation (M))|F} 1 -1 10.713 0.0 0.0 2.3955 0.0 0.0 282.1498058919604 0.0 282.1498058919604 0.0 9.119543704721591 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.3955 - 4 + 1 2.22 65524.4 1.0 208 3787 3996 SUDHL4_400M_050219_2,3997 SUDHL4_400M_050219_2,3997, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4011 17.167 800.0 167900.0 25 0 17519.0 + 18129 KTLQVKDKA 9 118 515.8165064179849 1029.6184599027697 2 515.8163940310478 MULTI CID FTMS 0 0 0 4010 161994.625 0.1178224667442781 -18 0.0919189453125 1 Unmodified _KTLQVKDKA_ ENST00000532980.3_1_11:59055317-59056556:-|nuORF 53.40400417844725 0.0329064971918313 6 KT{I|L}QTQ{I|L}AK 9 5 + 97.834 0.0 0.0 9.502 9.502 94.303 0.0 0.0 0.0 75.93949106023024 19.973024840566467 19.973024840566467 9.208187539523747 0 2.341129063296272 0.0 0.7302046884880937 0.8807196863200843 KT{I|L}QTQ{I|L}AK;KT{I|L}[AG]TQ{I|L}AK;KT{I|L}QT[AG]{I|L}AK;KT{I|L}[TA]GQ{I|L}AK;KT{I|L}[AG]T[AG]{I|L}AK;KT{I|L}[TA]G[AG]{I|L}AK;[{I|L}T]QQTK{I|L}AK;[{I|L}T]QKTQ{I|L}AK;[{I|L}T]Q[TA]GK{I|L}AK;[KT]{I|L}QTQ{I|L}AK 9.502;8.6076;8.6076;8.5054;7.7175;7.6153;4.552;4.1206;3.9035;3.8803 -;-;-;-;-;-;-;-;-;- 2493 + 1 2.22 103305.5 0.6000000238418579 209 3800 4010 SUDHL4_400M_050219_2,4011 SUDHL4_400M_050219_2,4011,KTLQVKDKA True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4014 17.188 800.0 128810.0 25 0 37954.0 + 31428 RPNVTRQSSL 10 83 579.3228455182989 1156.6311381033977 2 579.3224365115166 MULTI CID FTMS 0 0 0 4013 77420.0546875 0.1092402226709811 -25 0.1997356414794922 1 Unmodified _RPNVTRQSSL_ REV__ENST00000598424.5_1_19:17581379-17594898:+|nuORF 10.799506525563784 0.666336781075408 6 RP 2 -1 22.875 0.0 0.0 1.9777 0.0 0.0 0.0 900.4527071588499 900.4527071588499 3.1825031801593404 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 RP 1.9777 + + 72 + 1 2.22 81635.4 0.4399999976158142 210 3802 4013 SUDHL4_400M_050219_2,4014 SUDHL4_400M_050219_2,4014,RPNVTRQSSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4017 17.203 470.0 113960.0 25 0 20885.0 -1 CPFKVMWK 8 76 556.2727219042466 1110.5308908752932 2 556.2725097537041 MULTI CID FTMS 0 0 0 4016 110257.53125 0.2130361360203196 21 -0.1431770324707031 1 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))PFKVM(Oxidation (M))WK_ ENST00000361121.6_1_13:45603401-45603617:+|nuORF 23.1484247019978 0.5573009939494978 6 [DV]QHVDAA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 10 -1 + 69.161 0.0 0.0 6.2277 6.2277 90.243 0.0 0.0 0.0 2.7723363982340032 39.50704680132773 2.7723363982340032 9.832881222565248 0 2.742992819099939 1.3979400086720375 0.2614393726401688 0.3252574989159953 [DV]QHVDAA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CT]|[{M(Oxidation (M))|F}G]}VDAAEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AADV{[CT]|[{M(Oxidation (M))|F}G]}EK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[CT]|[{M(Oxidation (M))|F}G]}VDAAT[VG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAA[{M(Oxidation (M))|F}E]AEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AA[{M(Oxidation (M))|F}E]AAEK;[DV]A[RH]WA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AADV{[CT]|[{M(Oxidation (M))|F}G]}T[VG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AAA[{M(Oxidation (M))|F}E]AT[VG];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AA[{M(Oxidation (M))|F}E]AAT[VG] 6.2277;5.3423;5.3129;3.908;3.7371;3.7165;3.6622;3.5857;2.3028;2.2822 -;-;-;-;-;-;-;-;-;- 248 1 2.22 45749.4 1.0 211 3804 4016 SUDHL4_400M_050219_2,4017 SUDHL4_400M_050219_2,4017,CPFKVMWK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4018 17.217 800.0 84152.0 25 0 17437.0 -1 0 35 679.0431533425639 2034.107630627892 3 679.3770629763603 MULTI CID FTMS 0 0 0 4016 75030.1640625 1.0 0 0.0 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.22 58570.2 0.3499999940395355 212 3804 4016 SUDHL4_400M_050219_2,4018 SUDHL4_400M_050219_2,4018, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4025 17.25 591.0 179570.0 25 0 25368.0 + -1 LTGWPLTMK 9 91 531.7847758511125 1061.554998769025 2 531.7845336794853 MULTI CID FTMS 0 0 0 4024 184536.5 0.7195381147565453 15 -0.0983161926269531 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 34.40172386719151 0.1061884637610825 6 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K 9 -1 + 54.113 0.0 0.0 5.0975 5.0975 80.8 0.0 0.0 0.0 6.679738915614436 37.20143303225781 6.679738915614436 4.820618910682484 0 1.7302046884880935 0.0 0.8807196863200843 0.5941876774005248 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;[KT]T[HS]{I|L}T{M(Oxidation (M))|F}K;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L}T{M(Oxidation (M))|F}K;{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}P{I|L}TT{[CA]|SS};[KT]T{[TV]|[{I|L}S]}HGV[YG];[KT]T{[TV]|[{I|L}S]}HR[YG];[HT]VGH{[TV]|[{I|L}S]}[PS]K;[KT]T[HS]{I|L}GV[YG];[KT]T[HS]{I|L}R[YG];[KT]{[{M(Oxidation (M))|F}H]|[RQ]}[PG]TT{[CA]|SS} 5.0975;4.6434;4.0128;3.1453;3.0538;3.0056;2.8047;2.5997;2.5515;2.5022 -;-;-;-;-;-;-;-;-;- 524 1 2.22 84303.8 1.0 213 3810 4024 SUDHL4_400M_050219_2,4025 SUDHL4_400M_050219_2,4025,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4028 17.259 115.0 379760.0 25 0 34290.0 23154 LSPVAIEQTSL 11 75 386.5512012552906 1156.6317743660718 3 386.5509521365166 MULTI CID FTMS 0 0 0 4027 393779.03125 0.5635111652399706 -12 0.1041450500488281 1 Unmodified _LSPVAIEQTSL_ ENSG00000198795|ENST00000361524|ZNF521 20.41453444215458 0.6105011870913812 6 [{M(Oxidation (M))|F}V]T 3 9 28.952 0.0 0.0 2.5032 0.0 0.0 0.0 806.4392276276077 806.4392276276077 5.848396689760094 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{M(Oxidation (M))|F}V]T 2.5032 - 19 + 1 2.22 40629.9 1.0 214 3812 4027 SUDHL4_400M_050219_2,4028 SUDHL4_400M_050219_2,4028,LSPVAIEQTSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4031 17.271 273.0 155390.0 25 0 27058.0 + 31967 RVFDHKQGTY 10 57 417.547344617972 1249.620204454116 3 417.5471374392509 MULTI CID FTMS 0 0 0 4030 170946.71875 0.2986003766637885 -15 0.1170520782470703 1 Unmodified _RVFDHKQGTY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 15.248480904072842 0.5916873121453583 6 Y 1 9 15.485 0.0 0.0 1.2391 0.0 0.0 1068.5460447634894 0.0 1068.5460447634894 0.0 -11.896512253176828 -11.896512253176828 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2391 + + 51 + 1 2.22 41313.7 1.0 215 3814 4030 SUDHL4_400M_050219_2,4031 SUDHL4_400M_050219_2,4031,RVFDHKQGTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4039 17.311 800.0 66538.0 25 0 10882.0 + 33777 SLAVAETR 8 94 423.73765309307214 845.4607532529443 2 423.7371398806572 MULTI CID FTMS 0 0 0 4038 29823.896484375 0.3467767040932175 1 -0.0163555145263671 1 Unmodified _SLAVAETR_ REV__ENST00000585130.5_1_17:29284921-29285101:+|nuORF 7.289230182591677 0.7800870086367542 6 [Y{I|L}]E 3 -1 20.29 0.0 0.0 2.3999 0.0 0.0 0.0 437.23895694851 437.23895694851 4.828249072344022 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [Y{I|L}]E 2.3999 - 85 1 2.22 46724.7 0.8199999928474426 216 3821 4038 SUDHL4_400M_050219_2,4039 SUDHL4_400M_050219_2,4039,SLAVAETR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4042 17.324 361.0 213250.0 25 0 43534.0 + 15949 ITAKDSAKN 9 80 474.26167709294754 946.5088012526952 2 474.2617370486259 MULTI CID FTMS 0 0 0 4041 157785.921875 0.0391615046470276 -16 0.0901031494140625 1 Unmodified _ITAKDSAKN_ REV__ENSG00000108469|ENST00000317905|RECQL5;REV__nc|ENSG00000108469|O94762-2|RECQL5;REV__nc|ENSG00000108469|O94762-3|RECQL5;REV__nc|ENSG00000108469|O94762-4|RECQL5 24.020572477871973 0.2255576514309169 6 [{I|L}T]AQSVSNK 9 -1 + 68.043 0.0 0.0 7.1888 7.1888 91.46 0.0 0.0 0.0 54.090475125574855 7.236286549994659 7.236286549994659 9.208187539523747 0 0.9247425010840048 2.0 0.0 0.8494850021680094 [{I|L}T]AQSVSNK;[{I|L}T]A[AG]SVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]AQS[SG][VG]K;[{I|L}T]A[AG]SVSGGK;[{I|L}T]A{[MG]|[TS]}{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]};{[CT]|[{M(Oxidation (M))|F}G]}[R{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP];[VS]V{[MG]|[TS]}{[QN]|[E{I|L}]|[KN]}{[NV]|[RG]} 7.1888;6.216;6.216;5.4593;5.2477;4.0274;0.8216;0.60396 -;-;-;-;-;-;-;- 247 + 1 2.22 64400.1 1.0 217 3823 4041 SUDHL4_400M_050219_2,4042 SUDHL4_400M_050219_2,4042,ITAKDSAKN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4043 17.332 408.0 148960.0 25 0 19585.0 -1 0 44 509.5343900716923 2034.1084544203693 4 509.5340759158134 MULTI CID FTMS 0 0 0 4041 132441.015625 0.5512551224360668 22 -0.2023849487304687 2 6 HE 2 -1 20.969 0.0 0.0 1.0309 0.0 0.0 697.3410739306734 1067.641675431778 1764.9827493624516 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 HE 1.0309 - 7 + 1 2.22 56250.7 1.0 218 3823 4041 SUDHL4_400M_050219_2,4043 SUDHL4_400M_050219_2,4043, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4046 17.343 205.0 168860.0 25 0 33341.0 -1 0 50 407.8288258060361 2034.1077466971808 5 408.0292541384697 MULTI CID FTMS 0 0 0 4045 172853.734375 0.3907339659453093 24 -0.2016754150390625 1 6 {I|L}SDHE 5 -1 39.706 0.0 0.0 1.952 0.0 0.0 382.1972950259152 1067.640940599521 1449.838235625436 0.0 0.0 0.0 0.0 0 0.75 0.0 0.4247425010840047 0.0 {I|L}SDHE 1.952 - 30 + 1 2.22 36466.1 1.0 219 3825 4045 SUDHL4_400M_050219_2,4046 SUDHL4_400M_050219_2,4046, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4049 17.364 800.0 91982.0 25 0 8279.0 + 31969 RVFDHKQGTY 10 78 625.817298167488 1249.620043401776 2 625.8178588747978 MULTI CID FTMS 0 0 0 4048 111604.6015625 1.0 0 0.0 1 Unmodified _RVFDHKQGTY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 67.08073823543168 0.0190306485248484 6 KQGTY 5 5 60.503 0.0 0.0 4.8417 0.0 0.0 654.3229419951844 0.0 654.3229419951844 0.0 49.86825951563077 0.0 0.0 0 1.8494850021680087 0.0 0.3807196863200844 0.3252574989159953 + KQGTY 4.8417 + + 110 1 2.22 59456.8 0.3899999856948852 220 3827 4048 SUDHL4_400M_050219_2,4049 SUDHL4_400M_050219_2,4049,RVFDHKQGTY True True RVFDHKQGTY 17.363888 625.817858874798 6154083.4375 4048.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 10.626178741455078 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4050 17.367 131.0 378730.0 25 0 146800.0 -1 0 61 448.2363384847338 447.22906201813385 1 448.2359802126884 MULTI CID FTMS 0 0 0 4048 235836.515625 0.839392448973395 21 -0.1857662200927734 2 6 K 1 -1 16.722 0.0 0.0 3.739 0.0 0.0 301.12354551598384 0.0 301.12354551598384 0.0 4.503187623076954 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 K 3.739 - 11 + 1 2.22 45653.7 1.0 221 3827 4048 SUDHL4_400M_050219_2,4050 SUDHL4_400M_050219_2,4050, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4051 17.38 800.0 79502.0 25 0 5756.6 + -1 ESEELCNRESE 11 77 691.2785850660864 1380.5426171989727 2 691.2785522341728 MULTI CID FTMS 0 0 0 4048 96473.078125 0.4583763026371342 -4 0.0322437286376953 3 Carbamidomethyl (C) _ESEELC(Carbamidomethyl (C))NRESE_ REV__ENSG00000058729|ENST00000283109|RIOK2;REV__nc|ENSG00000058729|Q9BVS4-2|RIOK2 41.95555342248728 0.1822715950200113 6 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TEEVEHGEAH 12 -1 + 119.39 0.0 0.0 8.648 8.648 91.647 0.0 0.0 0.0 94.76986224881998 16.611814434466183 16.611814434466183 8.010299956639813 0 3.593569022618561 0.0 1.610924374808178 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TEEVEHGEAH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TEPMEHGEAH;EESEEVEHGEAH;{[ES]|[DT]|[{I|L}C]}EEEVEHGEAH;{[ET]|[MV]}DEEVEHGEAH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QQCVEHGEAH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TEPM[WH]EAH;{[MG]|[TS]}[HS]HEVEESCH;EETDEVEHGEAH;[HA]{M(Oxidation (M))|F}GHEVEESCH 8.648;8.0678;6.8361;6.0961;6.0326;5.9316;5.8971;5.8795;5.7661;5.7095 -;-;-;-;-;-;-;-;-;- 3321 + 1 2.22 50911.3 0.3899999856948852 222 3827 4048 SUDHL4_400M_050219_2,4051 SUDHL4_400M_050219_2,4051,ESEELCNRESE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4054 17.392 267.0 326780.0 25 0 118960.0 + 13587 HPLTVVLTSNE 11 81 403.8879360486972 1208.6419787462914 3 403.8875305056572 MULTI CID FTMS 0 0 0 4053 89464.8125 0.0461941061406883 128 -0.961322784423828 1 Unmodified _HPLTVVLTSNE_ REV__ENSG00000159650|ENST00000290868|UROC1;REV__nc|ENSG00000159650|Q96N76-2|UROC1 7.608950283845883 0.8392484121837455 6 PEH 3 -1 20.49 0.0 0.0 1.6953 0.0 0.0 448.24477815465247 394.219733706465 842.4645118611174 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 PEH 1.6953 - 100 + 1 2.22 70279.4 1.0 223 3829 4053 SUDHL4_400M_050219_2,4054 SUDHL4_400M_050219_2,4054,HPLTVVLTSNE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4055 17.403 662.0 96440.0 25 0 8191.8 2791 ATTLPAAYA 9 96 439.73612024838087 877.4576875635618 2 439.7364990115166 MULTI CID FTMS 0 0 0 4053 97743.515625 0.1906234293321271 -26 0.1960277557373047 2 Unmodified _ATTLPAAYA_ ENSG00000124788|ENST00000436367|ATXN1 23.1484247019978 0.2366544122328345 6 [TA]TP{I|L}T{M(Oxidation (M))|F}K 8 5 + 58.301 0.0 0.0 6.6443 6.6443 92.424 0.0 0.0 0.0 42.237017028498045 9.18366291575822 9.18366291575822 13.476348903606414 0 0.9247425010840048 1.6989700043360187 0.5 0.0 [TA]TP{I|L}T{M(Oxidation (M))|F}K;[TA]TP{I|L}{[NV]|[RG]}Y;[TP]{I|L}TK{M(Oxidation (M))|F}[TA];[{I|L}P]TTK{M(Oxidation (M))|F}[TA];[TP]{I|L}TKT{[MS]|[{M(Oxidation (M))|F}A]};[{I|L}P]TTKT{[MS]|[{M(Oxidation (M))|F}A]};{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]K{M(Oxidation (M))|F}[TA] 6.6443;5.1085;1.8892;1.7133;1.3454;1.1696;0.32518 -;-;-;-;-;-;- 120 + 1 2.22 54281.1 1.0 224 3829 4053 SUDHL4_400M_050219_2,4055 SUDHL4_400M_050219_2,4055,ATTLPAAYA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4056 17.408 216.0 282810.0 25 0 42309.0 + -1 IQRLETMK 8 81 517.7871400340238 1033.5597271348474 2 517.7870361208916 MULTI CID FTMS 0 0 0 4053 312438.78125 0.9001569100849752 21 -0.1567649841308593 3 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 6 T{M(Oxidation (M))|F}K 3 -1 39.253 0.0 0.0 3.7978 0.0 0.0 639.3700931966415 0.0 639.3700931966415 0.0 14.038077735717422 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.7978 + + 157 1 2.22 50118.8 1.0 225 3829 4053 SUDHL4_400M_050219_2,4056 SUDHL4_400M_050219_2,4056,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4057 17.421 800.0 108930.0 25 0 12270.0 + + 16621 RQSSGASSSSF 11 96 550.6033024431435 1648.7880779296306 3 550.6027099490166 MULTI CID FTMS 0 0 0 4053 74407.3515625 0.5330791300707254 -10 0.0975761413574218 4 Unmodified _KEFYQFPRYWW_ nc|ENSG00000215301|O00571-2|DDX3X;ENSG00000215301|ENST00000644876|DDX3X 2.434785330301024 0.8636604596255422 6 {[DA]|[EG]}H[YR]S{I|L}GSGGS{I|L}R{[CA]|SS} 16 -1 {[DA]|[EG]}H[YR]S{I|L} + + 43.751 -5.1362 -0.60971 2.6535 2.6535 51.138 0.0 0.0 0.0 0.0 25.176062401770302 0.0 0.0 0 0.8807196863200843 0.0 0.3807196863200844 0.3054621874040891 {[DA]|[EG]}H[YR]S{I|L}GSGGS{I|L}R{[CA]|SS} 2.6535 - 753 + 1 2.22 69182.7 0.3899999856948852 226 3829 4053 SUDHL4_400M_050219_2,4057 SUDHL4_400M_050219_2,4057,KEFYQFPRYWW False False RQSSGASSSSF 17.421365 550.602709949017 314808.65625 4053.0 nc|ENSG00000215301|O00571-2|DDX3X;;ENSG00000215301|ENST00000644876|DDX3X 1.5835336446762085 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4059 17.428 125.0 392470.0 25 0 43290.0 + 18130 KTLQVKDKA 9 73 515.8165064179849 1029.6184599027697 2 515.8164550662041 MULTI CID FTMS 0 0 0 4058 504397.21875 0.3668598543444157 12 -0.0693378448486328 1 Unmodified _KTLQVKDKA_ ENST00000532980.3_1_11:59055317-59056556:-|nuORF 34.93206674587334 0.1032771302489716 6 KT{I|L}Q[QT]{I|L}AK 9 5 + 81.899 0.0 0.0 7.9543 7.9543 92.893 0.0 0.0 0.0 76.41445682122455 16.979823445252407 16.979823445252407 9.208187539523747 0 2.06295299324845 0.0 0.805462187404089 0.6382104921644451 KT{I|L}Q[QT]{I|L}AK;KT{I|L}[AG][QT]{I|L}AK 7.9543;7.06 -;- 106 + 1 2.22 42984.1 1.0 227 3830 4058 SUDHL4_400M_050219_2,4059 SUDHL4_400M_050219_2,4059,KTLQVKDKA True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4060 17.438 570.0 105990.0 25 0 10711.0 + 35526 STMSTNGIPR 10 84 540.2611019914189 1078.5076510496376 2 540.2610961794853 MULTI CID FTMS 0 0 0 4058 139158.265625 0.0316854317888352 -50 0.370981216430664 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 79.59630418116434 0.0173986606250113 6 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 79.73 0.0 0.0 7.3926 7.3926 64.328 0.0 0.0 0.0 7.269987279362624 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7742275032520141 0.7614393726401688 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}S{[QG]|[NA]}S{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}S{[QG]|[NA]}S{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STN[KT]PP;{[MG]|[TS]}{M(Oxidation (M))|F}STK{[QS]|[NT]}PP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG[KT]PP;AAE[VG]KTS[WM] 7.3926;7.3926;6.5429;6.5429;5.1496;5.1496;4.8937;4.2456;4.0439;3.6582 -;+;-;-;-;-;-;-;-;- + 306 + 1 2.22 48501.4 1.0 228 3830 4058 SUDHL4_400M_050219_2,4060 SUDHL4_400M_050219_2,4060,STMSTNGIPR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4062 17.443 158.0 378670.0 25 0 128240.0 24045 LWELLFHSI 9 49 579.3228455182989 1156.6311381033977 2 579.3228637576103 MULTI CID FTMS 0 0 0 4061 295857.59375 0.4174570729845906 4 -0.017679214477539 1 Unmodified _LWELLFHSI_ ENSG00000170615|ENST00000306312|SLC26A5;nc|ENSG00000170615|P58743-5|SLC26A5;nc|ENSG00000170615|P58743-6|SLC26A5 7.289230182591677 0.6602208344931196 6 TS{I|L} 3 7 11.695 0.0 0.0 1.0111 0.0 0.0 837.4565298043727 0.0 837.4565298043727 0.0 4.704999916446797 0.0 0.0 0 0.274227503252014 0.0 0.0 0.0 TS{I|L} 1.0111 - 16 + 1 2.22 52930.7 1.0 229 3831 4061 SUDHL4_400M_050219_2,4062 SUDHL4_400M_050219_2,4062,LWELLFHSI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4067 17.467 494.0 149710.0 25 0 47490.0 -1 0 78 400.21660890517137 399.2093324385714 1 400.2158080935478 MULTI CID FTMS 0 0 0 4066 127948.1328125 0.5478143368786222 34 -0.1957206726074218 1 6 V 1 -1 9.8329 0.0 0.0 2.4631 0.0 0.0 282.12995424208543 0.0 282.12995424208543 0.0 -3.9794000867203767 -3.9794000867203767 0.0 0 0.0 0.0 0.0 0.0 V 2.4631 - 10 + 1 2.22 65656.9 1.0 230 3835 4066 SUDHL4_400M_050219_2,4067 SUDHL4_400M_050219_2,4067, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4075 17.507 800.0 136030.0 25 0 20608.0 + -1 LTGWPLTMK 9 94 531.7850803231456 1061.5556077130911 2 531.7845336794853 MULTI CID FTMS 0 0 0 4074 109975.046875 0.5049539038923562 -17 0.1550369262695312 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 18.1463463914782 0.3454829746528889 6 [KT]EA[{I|L}P]ETK 9 -1 37.189 0.0 0.0 3.5033 0.0 0.0 0.0 60.9763584651553 60.9763584651553 18.65024697793566 0.0 0.0 0.0 0 0.7614393726401688 0.0 1.274227503252014 0.0 [KT]EA[{I|L}P]ETK 3.5033 - 269 1 2.22 88843.2 0.4900000095367431 231 3842 4074 SUDHL4_400M_050219_2,4075 SUDHL4_400M_050219_2,4075,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4078 17.518 209.0 234810.0 25 0 77624.0 + -1 APMSNPHTV 9 69 485.22649504247255 968.4384371517452 2 485.2263366580009 MULTI CID FTMS 0 0 0 4077 176601.640625 0.1427887620183804 -41 0.3227138519287109 1 Oxidation (M) _APM(Oxidation (M))SNPHTV_ REV__ENSG00000068697|ENST00000175091|LAPTM4A 25.399314129420983 0.2080152500878129 6 [PS]A{M(Oxidation (M))|F} 4 -1 41.995 0.0 0.0 4.3363 0.0 0.0 0.0 563.2586025172326 563.2586025172326 21.827125221306645 0.0 0.0 0.0 0 0.5 2.0 0.3807196863200844 0.0 [PS]A{M(Oxidation (M))|F} 4.3363 - 165 1 2.22 45525.5 1.0 232 3844 4077 SUDHL4_400M_050219_2,4078 SUDHL4_400M_050219_2,4078,APMSNPHTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4080 17.525 278.0 168990.0 25 0 32647.0 + 31968 RVFDHKQGTY 10 67 417.547344617972 1249.620204454116 3 417.5471984744072 MULTI CID FTMS 0 0 0 4079 159813.375 0.2791532608514095 16 -0.0885791778564453 1 Unmodified _RVFDHKQGTY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 17.44264345198275 0.5548713957087773 6 H[KQ]{[SA]|[TG]}Y 6 4 22.72 0.0 0.0 1.8182 0.0 0.0 517.2654064143933 0.0 517.2654064143933 0.0 18.11629054940952 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + H[KQ]{[SA]|[TG]}Y 1.8182 + + 16 1 2.22 45716.3 1.0 233 3845 4079 SUDHL4_400M_050219_2,4080 SUDHL4_400M_050219_2,4080,RVFDHKQGTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4087 17.561 800.0 78968.0 25 0 4245.4 + 14230 IDQVHQEKE 9 96 563.2804731098298 1124.5463932864595 2 563.2804443240166 MULTI CID FTMS 0 0 0 4086 64376.2265625 0.3576043240829858 -11 0.0623245239257812 1 Unmodified _IDQVHQEKE_ REV__ENSG00000122126|ENST00000371113|OCRL;REV__ENST00000486673.1_1_X:128678947-128683662:+|nuORF;REV__nc|ENSG00000122126|Q01968-2|OCRL 34.93206674587334 0.1032771302489716 6 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK 10 -1 + 77.023 0.0 0.0 6.8493 6.8493 89.846 0.0 0.0 0.0 57.75663561143497 18.279550148593486 18.279550148593486 9.164539485499262 0 2.4876954943324545 0.0 0.7742275032520141 0.7059771852360797 {NN|[MP]|[D{I|L}]|[EV]}QHVDAAEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HVDAAEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A{M(Oxidation (M))|F}VDAAEK;{NN|[MP]|[D{I|L}]|[EV]}QHERAEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AADV{M(Oxidation (M))|F}AEK;{NN|[MP]|[D{I|L}]|[EV]}QHS[TP]AEK;{NN|[MP]|[D{I|L}]|[EV]}[AG]HERAEK;{NN|[MP]|[D{I|L}]|[EV]}QHVDAT{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}[AG]HS[TP]AEK;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[VG]E{M(Oxidation (M))|F}AEK 6.8493;6.0343;5.1338;5.1032;5.0891;4.5141;4.2843;3.86;3.6992;3.3004 -;-;-;-;-;-;-;-;-;- 858 + 1 2.22 56169.2 0.4099999964237213 234 3851 4086 SUDHL4_400M_050219_2,4087 SUDHL4_400M_050219_2,4087,IDQVHQEKE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4091 17.574 34.0 1468100.0 25 0 378570.0 + 37156 TIAETERK 8 72 474.26167709294754 946.5088012526952 2 474.2615234255791 MULTI CID FTMS 0 0 0 4090 1724747.0 0.428071699000852 15 -0.0815601348876953 1 Unmodified _TIAETERK_ REV__ENST00000299237.2_1_16:58031894-58032311:-|nuORF 25.399314129420983 0.5099049743284904 6 [{I|L}T]AQSVSNK 9 -1 + 78.81 0.0 0.0 8.3264 8.3264 93.303 0.0 0.0 0.0 57.841087759491856 11.962724883926654 11.962724883926654 9.208187539523747 0 0.8494850021680094 2.0 0.3494850021680094 0.4247425010840047 [{I|L}T]AQSVSNK;[{I|L}T]A[AG]SVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSGGK;[{I|L}T]A{[MG]|[TS]}{[VA]|[{I|L}G]}{[RE]|[WV]} 8.3264;7.3536;7.3536;6.3853;2.4924 -;-;-;-;- 149 + 1 2.22 44666.2 1.0 235 3854 4090 SUDHL4_400M_050219_2,4091 SUDHL4_400M_050219_2,4091,TIAETERK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4094 17.59 518.0 141870.0 25 0 19497.0 + 20777 ILEKKVEKV 9 105 362.5693970454898 1084.6863617366694 3 362.5690490603447 MULTI CID FTMS 0 0 0 4093 113981.3125 0.9981160480985825 1 -0.0116539001464843 1 Unmodified _LLVASPFLLL_ ENST00000436135.1_1_1:158495166-158495214:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;ENSG00000080824|ENST00000216281|HSP90AA1 17.44264345198275 0.5548713957087773 6 {I|L}E{I|L}KKD{I|L}KV 9 8 + 33.752 0.0 0.0 3.1117 3.1117 80.571 0.0 0.0 0.0 17.553816946194058 0.8899513240713901 0.8899513240713901 9.902953031565865 0 0.3865006360318688 1.5228787452803376 0.0 0.0 {I|L}E{I|L}KKD{I|L}KV;{I|L}V{I|L}{[SA]|[TG]}KD{I|L}KV 3.1117;2.1987 -;- 137 + 1 2.22 64706.2 1.0 236 3856 4093 SUDHL4_400M_050219_2,4094 SUDHL4_400M_050219_2,4094,LLVASPFLLL False False ILEKKVEKV 17.589989 362.569049060345 405941.40625 4093.0 ENST00000436135.1_1_1:158495166-158495214:+|nuORF;;nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1 3.8737715085347495 3.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4103 17.634 790.0 95463.0 25 0 16934.0 -1 0 38 578.4895509688916 2887.411372511458 5 578.6902953982353 MULTI CID FTMS 0 0 0 4102 59521.75390625 0.7584892167837236 1 -0.0161819458007812 1 6 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.24207 0.0 0.0 2531.35123564798 206.00745569400627 2737.3586913419863 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.24207 - 1 + 1 2.22 63535.4 1.0 237 3864 4102 SUDHL4_400M_050219_2,4103 SUDHL4_400M_050219_2,4103, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4107 17.647 100.0 454650.0 25 0 36105.0 36641 TATPTPPPP 9 101 439.73612024838087 877.4576875635618 2 439.7356445193291 MULTI CID FTMS 0 0 0 4106 452573.40625 0.8826272942225872 12 -0.0640201568603515 1 Unmodified _TATPTPPPP_ ENST00000420367.1_1_10:112631800-112631956:-|nuORF 15.847184025352805 0.4077185912009129 6 [VS][HA]{I|L}PTGP 9 7 [VS][HA]{I|L}P + + 31.198 6.6555 1.1013 3.5555 3.5555 52.921 0.0 0.0 0.0 0.0 2.269987279362624 0.0 0.0 0 0.5 0.0 0.0 0.0 [VS][HA]{I|L}PTGP 3.5555 - 177 + 1 2.22 39333.2 1.0 238 3867 4106 SUDHL4_400M_050219_2,4107 SUDHL4_400M_050219_2,4107,TATPTPPPP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4116 17.68 13.0 2730200.0 25 0 301330.0 + 35527 STMSTNGIPR 10 66 540.2611019914189 1078.5076510496376 2 540.2612792849541 MULTI CID FTMS 0 0 0 4115 4158057.25 0.9467625855871384 -5 0.0201416015625 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 40.23920728925047 0.1550410903091231 6 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP 10 2 + 55.406 0.0 0.0 5.1373 5.1373 57.751 0.0 0.0 0.0 7.269987279362624 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.4247425010840047 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP 5.1373;5.1373;4.2875;4.2875 -;+;-;- + 81 + 1 2.22 30319.2 1.0 239 3875 4115 SUDHL4_400M_050219_2,4116 SUDHL4_400M_050219_2,4116,STMSTNGIPR False False STMSTNGIPR 17.680211 540.261279284954 110340536.0 4115.0 ENST00000345125.7_1_8:11710176-11718921:-|nuORF;;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;;ENST00000534636.5_1_8:11710176-11725551:-|nuORF;;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;;ENST00000532370.1_1_8:11710176-11711001:-|nuORF 10.518720944722494 2.0 True 10.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4120 17.705 800.0 130230.0 25 0 26514.0 + 17642 KPTAAFHLL 9 74 499.2930674051332 996.5715818770664 2 499.2928039431572 MULTI CID FTMS 0 0 0 4119 93751.71875 0.0015279064885242 -37 0.2016811370849609 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 23.1484247019978 0.2366544122328345 6 KPT 3 -1 43.5 0.0 0.0 4.365 0.0 0.0 0.0 667.3527881625458 667.3527881625458 23.578409410397462 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 KPT 4.365 + + 33 + 1 2.22 84053.6 0.4600000083446502 240 3878 4119 SUDHL4_400M_050219_2,4120 SUDHL4_400M_050219_2,4120,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4121 17.706 72.0 554940.0 25 0 116620.0 + + 35816 TATPTIMK 8 79 439.24841672738927 876.4822805215786 2 439.2478515505791 MULTI CID FTMS 0 0 0 4119 459018.5625 0.4943946303805736 -14 0.070098876953125 2 Unmodified _SVKSFRGP_ ENSG00000020577|ENST00000554335|SAMD4A;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 16.942295170755138 0.6606234159769251 6 TP{I|L}[HA]AP 7 -1 28.293 0.0 0.0 3.228 0.0 0.0 171.1049744686473 0.0 171.1049744686473 0.0 3.2314572477816483 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 TP{I|L}[HA]AP 3.228 - 106 + 1 2.22 35915.2 1.0 241 3878 4119 SUDHL4_400M_050219_2,4121 SUDHL4_400M_050219_2,4121,SVKSFRGP False False TATPTIMK 17.706379 439.247851550579 9260521.0 4119.0 ENSG00000020577|ENST00000554335|SAMD4A;;nc|ENSG00000020577|Q9UPU9-2|SAMD4A;;ENST00000556069.5_1_14:55241706-55251269:+|nuORF;;nc|ENSG00000020577|Q9UPU9-3|SAMD4A 3.38290270169576 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4132 17.755 577.0 164020.0 25 0 25863.0 + -1 LTGWPLTMK 9 84 531.7849729455694 1061.5553929579387 2 531.7843505740166 MULTI CID FTMS 0 0 0 4131 126981.4609375 0.5491500209981894 -16 0.0794181823730468 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 29.081581746732265 0.1611639662936252 6 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K 9 -1 + 56.488 0.0 0.0 5.3213 5.3213 88.551 0.0 0.0 0.0 4.232712163289278 33.136955994924264 4.232712163289278 14.704999916446797 0 1.2614393726401687 0.0 0.8494850021680094 0.3494850021680094 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]HT{M(Oxidation (M))|F}K;[KT]T{[TV]|[{I|L}S]}HGV[YG];[KT]T{[TV]|[{I|L}S]}HR[YG];[HT]VGH{[TV]|[{I|L}S]}[PS]K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]HTT{[CA]|SS};[PS]{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]T{M(Oxidation (M))|F}K;[HT]R[PG][HV]MK;[PS]{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]TT{[CA]|SS};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]HR[YG] 5.3213;3.936;3.0156;2.9674;2.9248;2.8965;2.8057;1.9964;1.7712;1.5822 -;-;-;-;-;-;-;-;-;- 361 1 2.22 79332.5 1.0 242 3888 4131 SUDHL4_400M_050219_2,4132 SUDHL4_400M_050219_2,4132,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4136 17.768 59.0 722940.0 25 0 47870.0 + 28335 PSAHCPASTV 10 78 485.22649504247255 968.4384371517452 2 485.2263671755791 MULTI CID FTMS 0 0 0 4135 976212.3125 0.7893026762133193 6 -0.0410747528076171 1 Unmodified _PSAHCPASTV_ REV__ENST00000295404.9_1_19:50194996-50204826:+|nuORF 22.736283301280096 0.4578556481593033 6 SPA{M(Oxidation (M))|F}PHNS{I|L} 9 -1 + 70.529 0.0 0.0 7.2828 7.2828 95.868 0.0 0.0 0.0 40.8366748685809 6.606056125004827 6.606056125004827 30.501896823007822 0 2.517220322351953 2.0 0.3807196863200844 0.0 SPA{M(Oxidation (M))|F}PHNS{I|L};SP[WE]HNS{I|L};SPA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{I|L};SP{[WN]|[YH]}{[YC]|[HE]}S{I|L};[PS][HN][WE]S{I|L};[PS][HN]S{NN|[MP]|[D{I|L}]|[EV]}S{I|L};S[WE]PHNS{I|L};[PS][HN]{I|L}T[WD];[PS][HN]{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{I|L};[PS][HN]S[WE]{I|L} 7.2828;4.1332;3.8368;3.5979;3.2956;3.2428;2.772;2.4876;2.4876;2.2585 -;-;-;-;-;-;-;-;-;- 356 + 1 2.22 40666.1 1.0 243 3891 4135 SUDHL4_400M_050219_2,4136 SUDHL4_400M_050219_2,4136,PSAHCPASTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4137 17.782 800.0 120080.0 25 0 6972.5 -1 0 53 636.7820335426157 2543.099028304063 4 637.0341064333916 MULTI CID FTMS 0 0 0 4135 88451.625 0.4563160091525921 -23 0.1162776947021484 2 6 DD[R{I|L}][C(Carbamidomethyl (C))H]C(Carbamidomethyl (C)) 7 -1 23.6 0.0 0.0 0.92802 0.0 0.0 1568.715594315285 0.0 1568.715594315285 0.0 12.631288188505678 0.0 0.0 0 1.0 0.0 0.0 0.0 DD[R{I|L}][C(Carbamidomethyl (C))H]C(Carbamidomethyl (C)) 0.92802 - 30 1 2.22 77932.2 0.949999988079071 244 3891 4135 SUDHL4_400M_050219_2,4137 SUDHL4_400M_050219_2,4137, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4140 17.793 183.0 452800.0 25 0 54758.0 + 27499 PKHATAKN 8 78 433.7458719753147 865.4771910174294 2 433.7457763552666 MULTI CID FTMS 0 0 0 4139 294498.09375 0.0675297909773194 -21 0.1232337951660156 1 Unmodified _PKHATAKN_ REV__ENSG00000155966|ENST00000370460|AFF2;REV__nc|ENSG00000155966|P51816-2|AFF2;REV__nc|ENSG00000155966|P51816-3|AFF2;REV__nc|ENSG00000155966|P51816-5|AFF2;REV__nc|ENSG00000155966|P51816-6|AFF2;REV__nc|ENSG00000155966|P51816-7|AFF2 15.847184025352805 0.6768015514314958 6 [VG]PTQ 5 -1 41.131 0.0 0.0 4.7525 0.0 0.0 0.0 380.1985872858032 380.1985872858032 13.300507888170031 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.3807196863200844 0.0 [VG]PTQ 4.7525 - 189 + 1 2.22 67409.9 1.0 245 3893 4139 SUDHL4_400M_050219_2,4140 SUDHL4_400M_050219_2,4140,PKHATAKN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4152 17.844 523.0 197850.0 25 0 77553.0 + 23335 LTATRGTLD 9 77 474.26167709294754 946.5088012526952 2 474.2620727419853 MULTI CID FTMS 0 0 0 4151 90130.8828125 0.0223699360764179 65 -0.6314830780029297 1 Unmodified _LTATRGTLD_ REV__ENST00000407780.7_1_21:45646995-45647220:-|nuORF 24.020572477871973 0.2255576514309169 6 [{I|L}T]AQSVS{[QN]|[E{I|L}]|[KN]} 9 -1 + 65.3 0.0 0.0 6.899 6.899 90.713 0.0 0.0 0.0 51.32052444111585 8.529747636836959 8.529747636836959 9.208187539523747 0 0.7742275032520141 2.0 0.0 0.7134679910804405 [{I|L}T]AQSVS{[QN]|[E{I|L}]|[KN]};[{I|L}T]A[AG]SVS{[QN]|[E{I|L}]|[KN]};{[CT]|[{M(Oxidation (M))|F}G]}[R{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP] 6.899;5.9262;0.52724 -;-;- 152 + 1 2.22 85381.6 1.0 246 3904 4151 SUDHL4_400M_050219_2,4152 SUDHL4_400M_050219_2,4152,LTATRGTLD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4155 17.864 800.0 174010.0 25 0 33188.0 -1 0 36 509.6276123518052 2543.1016794260263 5 509.6279479861259 MULTI CID FTMS 0 0 0 4154 59834.5546875 0.5165115893406647 1 -0.0162887573242187 1 6 W 1 -1 15.485 0.0 0.0 0.60888 0.0 0.0 2339.010674032275 0.0 2339.010674032275 0.0 15.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.60888 - 2 + 1 2.22 111046.2 0.5400000214576721 247 3906 4154 SUDHL4_400M_050219_2,4155 SUDHL4_400M_050219_2,4155, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4159 17.883 463.0 340640.0 25 0 74777.0 17501 KPGSPGPR 8 106 398.2278051943812 794.4410574555624 2 398.2275878787041 MULTI CID FTMS 0 0 0 4158 157462.5625 0.5300887973076027 -5 0.0397510528564453 1 Unmodified _KPGSPGPR_ ENST00000440422.5_1_2:219150512-219157252:-|nuORF;ENST00000444881.5_1_2:219150512-219151090:-|nuORF;ENST00000451181.5_1_2:219150512-219154698:-|nuORF;ENST00000453281.5_1_2:219150512-219157202:-|nuORF 24.020572477871973 0.5389365498350341 6 KPSPSQS 7 4 48.83 0.0 0.0 6.1465 0.0 0.0 0.0 80.05135523013905 80.05135523013905 16.206086617294147 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.7614393726401688 0.3252574989159953 KPSPSQS 6.1465 - 721 + 1 2.22 125411.5 1.0 248 3909 4158 SUDHL4_400M_050219_2,4159 SUDHL4_400M_050219_2,4159,KPGSPGPR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4160 17.897 800.0 89485.0 25 0 5654.5 -1 CDCEQCGEV 9 48 578.6898263026379 0 578.6898071169853 PEAK CID FTMS 0 0 0 4158 67746.53125 0.840762224108346 15 -0.1884365081787109 2 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))DC(Carbamidomethyl (C))EQC(Carbamidomethyl (C))GEV_ ENSG00000130818|ENST00000253115|ZNF426 0.5247636613948944 0.3444685223463735 6 {M(Oxidation (M))|F} 1 -1 2.4743 0.0 0.0 0.21415 0.0 0.0 799.305542642582 206.0055788629516 1005.3111215055336 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.21415 - 4 + 1 2.22 61806.4 0.4699999988079071 249 3909 4158 SUDHL4_400M_050219_2,4160 SUDHL4_400M_050219_2,4160,CDCEQCGEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4164 17.915 460.0 95170.0 25 0 4990.4 + 12344 GTAQSIGLK 9 91 437.7535227748407 873.4924926164814 2 437.7535888552666 MULTI CID FTMS 0 0 0 4163 123884.0 0.2106977127352837 26 -0.2777080535888672 1 Unmodified _GTAQSIGLK_ ENSG00000164061|ENST00000296452|BSN 34.40172386719151 0.1061884637610825 6 {[SA]|[TG]}AQVG{I|L}TK 9 3 + 68.785 0.0 0.0 7.8747 7.8747 92.785 0.0 0.0 0.0 58.59540131780594 13.169528901762703 13.169528901762703 9.208187539523747 0 0.6549471895720985 2.0 0.2742275032520141 0.6462566630072955 {[SA]|[TG]}AQVG{I|L}TK;{[SA]|[TG]}A[AG]VG{I|L}TK;{[SA]|[TG]}A{I|L}{I|L}[NG]TK 7.8747;6.8205;3.9925 -;-;- 116 + 1 2.22 42114.0 1.0 250 3912 4163 SUDHL4_400M_050219_2,4164 SUDHL4_400M_050219_2,4164,GTAQSIGLK True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4165 17.919 195.0 272080.0 25 0 84954.0 -1 0 56 490.2837389831674 489.2764625165674 1 490.2851440310478 MULTI CID FTMS 0 0 0 4163 211938.546875 0.7850385381177619 -46 0.2657394409179687 2 6 E{[QD]|[EN]|[WG]|[KD]|[RS]} 3 -1 8.9524 0.0 0.0 1.8297 0.0 0.0 99.10551650215 0.0 99.10551650215 0.0 5.853481135844875 0.0 0.0 0 0.0 0.0 0.0 0.0 E{[QD]|[EN]|[WG]|[KD]|[RS]} 1.8297 - 7 1 2.22 46918.6 1.0 251 3912 4163 SUDHL4_400M_050219_2,4165 SUDHL4_400M_050219_2,4165, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4168 17.939 800.0 298190.0 25 0 33837.0 + -1 EKLSFHMK 8 105 518.2661199032503 1034.5176868733006 2 518.2646362185478 MULTI CID FTMS 0 0 0 4167 134974.484375 0.7530007828678766 1 -0.0248012542724609 1 Oxidation (M) _EKLSFHM(Oxidation (M))K_ REV__ENSG00000125651|ENST00000394456|GTF2F1;REV__ENST00000594213.5_1_19:6380294-6381826:-|nuORF 8.593279151180031 0.7721714526254883 6 K 1 -1 15.159 0.0 0.0 1.4653 0.0 0.0 888.4115752783772 0.0 888.4115752783772 0.0 0.8939438749951716 0.0 0.0 0 0.0 0.0 0.0 0.2059771852360797 K 1.4653 + + 132 + 1 2.22 183836.1 0.7599999904632568 252 3914 4167 SUDHL4_400M_050219_2,4168 SUDHL4_400M_050219_2,4168,EKLSFHMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4169 17.947 499.0 188550.0 25 0 51471.0 17734 KPVSQAFSR 9 74 510.28388071659714 1018.5532084999944 2 510.2843200564384 MULTI CID FTMS 0 0 0 4167 97015.0078125 0.8693901991978987 1 -0.0248012542724609 2 Unmodified _KPVSQAFSR_ nc|ENSG00000162222|Q8N5M4-2|TTC9C 8.745405648335112 0.6093864874670651 6 P 1 8 6.9061 0.0 0.0 0.67803 0.0 0.0 793.4052267878834 125.0723360651 918.4775628529834 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + P 0.67803 + + 24 + 1 2.22 78454.7 1.0 253 3914 4167 SUDHL4_400M_050219_2,4169 SUDHL4_400M_050219_2,4169,KPVSQAFSR False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 4171 17.952 0.96 52482000.0 25 0 7647800.0 + 17687 KPTGARPSAL 10 58 499.2930674051332 996.5715818770664 2 499.2934142947197 MULTI CID FTMS 0 0 0 4170 61359592.0 1.0 0 0.0 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 18.373094154950223 0.5392593366289069 6 KPTG 4 6 45.433 0.0 0.0 4.5589 0.0 0.0 0.0 610.3311251275999 610.3311251275999 34.5955948453724 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPTG 4.5589 + + 20 + 1 2.22 44911.7 1.0 254 3915 4170 SUDHL4_400M_050219_2,4171 SUDHL4_400M_050219_2,4171,KPTGARPSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4172 17.956 193.0 300380.0 25 0 28145.0 + 35528 STMSTNGIPR 10 90 540.2611019914189 1078.5076510496376 2 540.2614013552666 MULTI CID FTMS 0 0 0 4170 474054.15625 0.1079390474192194 35 -0.3286209106445312 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 61.60191391372663 0.0323840705564037 6 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 74.698 0.0 0.0 6.926 6.926 63.184 0.0 0.0 0.0 7.269987279362624 0.0 0.0 0.0 0 1.0 0.0 0.8494850021680094 0.3807196863200844 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;AAE[VG]KTS[WM];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV][HV]T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};[HD]TS{[VA]|[{I|L}G]}[DV][HV] 6.926;6.926;6.0763;6.0763;2.5614;0.36719;0.037896 -;+;-;-;-;-;- + 214 + 1 2.22 49577.2 1.0 255 3915 4170 SUDHL4_400M_050219_2,4172 SUDHL4_400M_050219_2,4172,STMSTNGIPR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4173 17.969 800.0 89012.0 25 0 8004.8 + 27532 PKTKEQAPR 9 83 527.8038443989615 1053.5931358647229 2 527.8041869997978 MULTI CID FTMS 0 0 0 4170 95026.296875 0.8072417420154793 -2 0.0286540985107421 3 Unmodified _PKTKEQAPR_ REV__ENST00000578928.1_1_18:67562957-67563032:-|nuORF 13.90604991867851 0.4602628045680013 6 KPTG 4 -1 43.928 0.0 0.0 4.1693 0.0 0.0 0.0 667.3535250299436 667.3535250299436 33.74683944024909 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTG 4.1693 - 23 + 1 2.22 62025.1 0.4699999988079071 256 3915 4170 SUDHL4_400M_050219_2,4173 SUDHL4_400M_050219_2,4173,PKTKEQAPR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4175 17.976 214.0 233540.0 25 0 50137.0 31392 RPATPAPAP 9 85 439.24841672738927 876.4822805215786 2 439.2477294802666 MULTI CID FTMS 0 0 0 4174 306116.625 0.329708704689309 24 -0.2206916809082031 1 Unmodified _RPATPAPAP_ ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000095539|Q9NTN9|SEMA4G 18.1463463914782 0.3454829746528889 6 SAP 3 7 31.95 0.0 0.0 3.6453 0.0 0.0 603.3496338924755 0.0 603.3496338924755 0.0 24.960762528683706 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 SAP 3.6453 - 75 + 1 2.22 45566.8 1.0 257 3916 4174 SUDHL4_400M_050219_2,4175 SUDHL4_400M_050219_2,4175,RPATPAPAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4176 17.982 337.0 262930.0 25 0 31372.0 + -1 IQRLETMK 8 76 517.7864244883774 0 517.7864257693291 PEAK CID FTMS 0 0 0 4174 222006.171875 1.0 0 0.0 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.4320151646958274 6 T 1 -1 20.044 0.0 0.0 1.9394 0.0 0.0 293.14046264687346 636.3478596369984 929.488322283872 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 T 1.9394 + + 41 + 1 2.22 74052.1 1.0 258 3916 4174 SUDHL4_400M_050219_2,4176 SUDHL4_400M_050219_2,4176,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4181 18.009 800.0 131810.0 25 0 21064.0 + -1 LTGWPLTMK 9 88 531.7849729455694 1061.5553929579387 2 531.7848998904228 MULTI CID FTMS 0 0 0 4180 142479.015625 0.6161714776677583 16 -0.1808204650878906 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 36.12702656103203 0.0967173616627612 6 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K 9 -1 + 52.188 0.0 0.0 4.9162 4.9162 88.473 0.0 0.0 0.0 3.9904371307691378 34.52394126343172 3.9904371307691378 26.083041560618693 0 1.7302046884880935 0.0 0.7742275032520141 0.3252574989159953 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;[PS]{[QV]|[N{I|L}]|[RA]|[KV]}[KQ]T{M(Oxidation (M))|F}K;[HT]VGH{[TV]|[{I|L}S]}[PS]K;[KT]T{[TV]|[{I|L}S]}HGV[YG];[KT]T{[TV]|[{I|L}S]}HR[YG];[HT]R[PG][HV]MK;[PS]{[TV]|[{I|L}S]}[RV]E{M(Oxidation (M))|F}K;[YG]TT[RV][HT]K;[KT]T{[CP]|[EA]}[{I|L}P]T{[DS]|[MA]|[CV]|TT};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HT][RV]{M(Oxidation (M))|F}K 4.9162;2.4591;2.4098;2.3762;2.328;1.8343;1.7754;1.3584;1.2858;1.2829 -;-;-;-;-;-;-;-;-;- 380 1 2.22 88332.3 0.7300000190734863 259 3920 4180 SUDHL4_400M_050219_2,4181 SUDHL4_400M_050219_2,4181,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4182 18.023 800.0 134130.0 25 0 11812.0 + -1 TMGRVPAPA 9 126 458.23951410704905 914.464475280898 2 458.2392150759697 MULTI CID FTMS 0 0 0 4180 112125.4140625 0.3650506266781024 -11 0.1209754943847656 2 Oxidation (M) _TM(Oxidation (M))GRVPAPA_ REV__ENST00000406555.7_1_9:139557386-139563011:+|nuORF 15.847184025352805 0.4077185912009129 6 [VG][TA]E 5 -1 18.837 0.0 0.0 2.0599 0.0 0.0 0.0 454.2288756092229 454.2288756092229 2.173491715385904 0.0 0.0 0.0 0 0.8807196863200843 0.6575773191777937 0.3252574989159953 0.0 [VG][TA]E 2.0599 - 195 1 2.22 85884.9 0.7300000190734863 260 3920 4180 SUDHL4_400M_050219_2,4182 SUDHL4_400M_050219_2,4182,TMGRVPAPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4184 18.041 800.0 113810.0 25 0 5423.9 -1 0 60 636.7820335426157 2543.099028304063 4 636.7811767458916 MULTI CID FTMS 0 0 0 4183 31841.9375 0.1867459462689051 6 -0.084573745727539 1 6 D 1 -1 16.99 0.0 0.0 0.66807 0.0 0.0 1683.7369929593176 741.3129718945696 2425.049964853887 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 D 0.66807 - 13 + 1 2.22 77078.2 0.4900000095367431 261 3921 4183 SUDHL4_400M_050219_2,4184 SUDHL4_400M_050219_2,4184, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4185 18.048 422.0 344470.0 25 0 113120.0 -1 0 118 420.24158198258186 419.2343055159819 1 420.2409240603447 MULTI CID FTMS 0 0 0 4183 182192.609375 0.9486007067609252 -4 0.0414581298828125 2 6 Y 1 -1 16.99 0.0 0.0 4.0526 0.0 0.0 238.1597948732069 0.0 238.1597948732069 0.0 6.812412373755876 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 4.0526 - 24 + 1 2.22 122019.1 1.0 262 3921 4183 SUDHL4_400M_050219_2,4185 SUDHL4_400M_050219_2,4185, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4187 18.053 22.0 3965100.0 25 0 615370.0 + 1345 AKPSRNPP 8 90 433.7458719753147 865.4771910174294 2 433.7457763552666 MULTI CID FTMS 0 0 0 4186 3299107.75 0.7565008449877436 8 -0.0713634490966796 1 Unmodified _AKPSRNPP_ REV__ENST00000508652.5_1_4:164415907-164436651:+|nuORF 13.042465956692816 0.7182358012947757 6 [VG]PTQGTAA 9 -1 41.098 0.0 0.0 4.7485 0.0 0.0 0.0 80.05135523013905 80.05135523013905 12.285240617616964 0.0 0.0 0.0 0 1.079689690656103 1.6989700043360187 0.0 0.0 [VG]PTQGTAA 4.7485 - 682 + 1 2.22 71187.9 1.0 263 3922 4186 SUDHL4_400M_050219_2,4187 SUDHL4_400M_050219_2,4187,AKPSRNPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4188 18.057 197.0 424480.0 25 0 84116.0 + 12791 GVRSGAGAY 9 89 419.214627787238 836.414702641276 2 419.2142211794853 MULTI CID FTMS 0 0 0 4186 207295.25 0.3726840428066106 -19 0.2196197509765625 2 Unmodified _GVRSGAGAY_ REV__ENSG00000089692|ENST00000203629|LAG3;REV__ENST00000538079.1_1_12:6882155-6887174:+|nuORF;REV__nc|ENSG00000089692|P18627-2|LAG3 10.823927491677226 0.5436922275383211 6 VAY 3 -1 30.177 0.0 0.0 3.6079 0.0 0.0 485.23555190254064 0.0 485.23555190254064 0.0 21.397065965837 0.0 0.0 0 1.0 0.0 0.0 0.0 VAY 3.6079 - 75 1 2.22 73342.2 1.0 264 3922 4186 SUDHL4_400M_050219_2,4188 SUDHL4_400M_050219_2,4188,GVRSGAGAY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4191 18.077 800.0 49238.0 25 0 11549.0 + 43288 WITFKEQGS 9 54 548.2765673396218 1094.5385817460435 2 548.2761718630791 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _WITFKEQGS_ REV__ENSG00000188039|ENST00000524140|NWD1;REV__ENST00000438489.6_1_19:16849058-16926137:+|nuORF;REV__nc|ENSG00000188039|Q149M9|NWD1 4.75600775471527 0.7486543447549536 6 Q 1 -1 10.969 0.0 0.0 1.0022 0.0 0.0 948.470037289792 0.0 948.470037289792 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 1.0022 + + 17 + 1 2.22 36887.1 0.5199999809265137 265 3924 4190 SUDHL4_400M_050219_2,4191 SUDHL4_400M_050219_2,4191,WITFKEQGS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4192 18.091 800.0 105230.0 25 0 15665.0 17705 KPTKWALP 8 72 470.782600523711 939.550648114222 2 470.7823669314384 MULTI CID FTMS 0 0 0 4190 87956.1328125 0.7269451089334353 -1 0.0039443969726562 2 Unmodified _KPTKWALP_ ENST00000522362.6_1_8:26364258-26364426:-|nuORF 10.823927491677226 0.7510103885582552 6 KPT 3 5 35.445 0.0 0.0 3.7726 0.0 0.0 0.0 610.3287231354468 610.3287231354468 19.694831024277235 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + KPT 3.7726 + + 34 + 1 2.22 69839.5 0.5600000023841858 266 3924 4190 SUDHL4_400M_050219_2,4192 SUDHL4_400M_050219_2,4192,KPTKWALP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4194 18.104 527.0 145970.0 25 0 31702.0 + 15950 ITAKDSAKN 9 90 474.2621948363923 946.5098367395848 2 474.2619811892509 MULTI CID FTMS 0 0 0 4193 103715.5546875 0.4495863583250001 9 -0.0492172241210937 1 Unmodified _ITAKDSAKN_ REV__ENSG00000108469|ENST00000317905|RECQL5;REV__nc|ENSG00000108469|O94762-2|RECQL5;REV__nc|ENSG00000108469|O94762-3|RECQL5;REV__nc|ENSG00000108469|O94762-4|RECQL5 18.1463463914782 0.3454829746528889 6 [{I|L}T]AQSVSNK 9 -1 + 69.321 0.0 0.0 7.3238 7.3238 91.737 0.0 0.0 0.0 54.67931103030384 12.550371960669535 12.550371960669535 9.208187539523747 0 0.9247425010840048 2.0 0.0 0.6462566630072955 [{I|L}T]AQSVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSNK;[{I|L}T]AQSVVVM;[{I|L}T]A[AG]SVSGGK;[{I|L}T]AQ[{M(Oxidation (M))|F}T]AVP;[{I|L}T]A[{M(Oxidation (M))|F}T]QAVP;[{I|L}T]A{[MG]|[TS]}[{I|L}T]{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVSQAVP;[{I|L}T]A[AG]SVVVM 7.3238;6.3509;6.3509;5.6528;5.3827;5.1083;5.0315;4.7548;4.3475;4.2312 -;-;-;-;-;-;-;-;-;- 298 + 1 2.22 64876.1 1.0 267 3925 4193 SUDHL4_400M_050219_2,4194 SUDHL4_400M_050219_2,4194,ITAKDSAKN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4202 18.136 338.0 259490.0 25 0 74903.0 -1 0 74 491.21739002952 490.21011356292 1 491.2171813845634 MULTI CID FTMS 0 0 0 4201 197340.375 0.9299810930064004 9 -0.0666961669921875 1 6 {[{M(Oxidation (M))|F}D]|MM}[{I|L}P] 4 -1 + 14.705 0.0 0.0 2.9997 2.9997 81.697 0.0 0.0 0.0 2.2577249674798594 2.2577249674798594 2.2577249674798594 14.704999916446797 0 0.4247425010840047 0.0 0.0 0.0 {[{M(Oxidation (M))|F}D]|MM}[{I|L}P] 2.9997 - 6 + 1 2.22 71673.4 1.0 268 3932 4201 SUDHL4_400M_050219_2,4202 SUDHL4_400M_050219_2,4202, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4206 18.16 800.0 41217.0 25 0 8627.0 -1 0 35 1146.1432119459682 3435.4078064381047 3 1146.481249988079 MULTI CID FTMS 0 0 0 4205 64335.1875 0.1973805959309641 -18 0.1621112823486328 1 6 G 1 -1 6.9897 0.0 0.0 0.20346 0.0 0.0 1856.655405401062 1518.6990450494752 3375.354450450537 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20346 - 8 + 1 2.22 36884.5 0.3199999928474426 269 3935 4205 SUDHL4_400M_050219_2,4206 SUDHL4_400M_050219_2,4206, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4207 18.174 800.0 34946.0 25 0 6661.2 -1 0 25 1174.1130029212425 3519.317179363928 3 1174.449023425579 MULTI CID FTMS 0 0 0 4205 67611.5390625 1.0 0 0.0 2 6 P 1 -1 5.4846 0.0 0.0 0.15584 0.0 0.0 2553.906914326621 865.3269137018186 3419.2338280284403 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.15584 - 4 + 1 2.22 29113.8 0.3199999928474426 270 3935 4205 SUDHL4_400M_050219_2,4207 SUDHL4_400M_050219_2,4207, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4214 18.21 800.0 75920.0 25 0 7724.0 + 30416 RAYQQSEAY 9 83 558.2598811026053 1114.5052092720105 2 558.2593871951103 MULTI CID FTMS 0 0 0 4213 34673.4375 0.4183180751826407 1 -0.0163936614990234 1 Unmodified _RAYQQSEAY_ ENSG00000064961|ENST00000333651|HMG20B;ENST00000483417.1_1_19:3575543-3576359:+|nuORF;ENST00000486028.1_1_19:3574329-3575756:+|nuORF;ENST00000488973.6_1_19:3574329-3578516:+|nuORF;nc|ENSG00000064961|Q9P0W2-2|HMG20B;nc|ENSG00000064961|Q9P0W2-3|HMG20B 39.94969957227396 0.0757326808254658 6 QSEAY 5 4 49.609 0.0 0.0 4.4512 0.0 0.0 518.2612171857437 0.0 518.2612171857437 0.0 39.877203139966326 0.0 0.0 0 1.0 0.0 0.5 0.3807196863200844 + QSEAY 4.4512 + + 285 1 2.22 52010.2 0.4300000071525574 271 3941 4213 SUDHL4_400M_050219_2,4214 SUDHL4_400M_050219_2,4214,RAYQQSEAY True True RAYQQSEAY 18.210227 558.25938719511 332852.78125 4213.0 ENST00000488973.6_1_19:3574329-3578516:+|nuORF;;nc|ENSG00000064961|Q9P0W2-2|HMG20B;;ENST00000483417.1_1_19:3575543-3576359:+|nuORF;;ENSG00000064961|ENST00000333651|HMG20B;;nc|ENSG00000064961|Q9P0W2-3|HMG20B;;ENST00000486028.1_1_19:3574329-3575756:+|nuORF 6.377407391866048 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4216 18.215 4.9 9317500.0 25 0 1404600.0 + 17643 KPTAAFHLL 9 56 499.2930674051332 996.5715818770664 2 499.2932922244072 MULTI CID FTMS 0 0 0 4215 11463801.0 0.186829811384665 27 -0.2535915374755859 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 11.640296217721598 0.521594087909532 6 KPT 3 -1 35.445 0.0 0.0 3.5567 0.0 0.0 0.0 667.3553489780073 667.3553489780073 19.50318762307696 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 KPT 3.5567 + + 27 + 1 2.22 42529.4 1.0 272 3942 4215 SUDHL4_400M_050219_2,4216 SUDHL4_400M_050219_2,4216,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4217 18.226 646.0 71896.0 25 0 5868.2 + 35529 STMSTNGIPR 10 84 540.2611019914189 1078.5076510496376 2 540.2615234255791 MULTI CID FTMS 0 0 0 4215 97874.4140625 0.0222853673601147 62 -0.57781982421875 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 70.33199760932243 0.018925923965799 6 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 68.958 0.0 0.0 6.3939 6.3939 61.895 0.0 0.0 0.0 7.269987279362624 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.4247425010840047 0.75 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP 6.3939;6.3939;5.5441;5.5441 -;+;-;- + 205 + 1 2.22 39624.1 1.0 273 3942 4215 SUDHL4_400M_050219_2,4217 SUDHL4_400M_050219_2,4217,STMSTNGIPR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4222 18.25 525.0 200530.0 25 0 36482.0 + -1 NQGLLSKMK 9 101 517.7862942788914 1033.5580356245828 2 517.7866699099541 MULTI CID FTMS 0 0 0 4221 160608.078125 0.891207013046894 -33 0.3198585510253906 1 Oxidation (M) _NQGLLSKM(Oxidation (M))K_ REV__ENSG00000167632|ENST00000438773|TRAPPC9;REV__nc|ENSG00000167632|Q96Q05-2|TRAPPC9;REV__nc|ENSG00000167632|Q96Q05-3|TRAPPC9 24.020572477871973 0.2255576514309169 6 KTT[{I|L}P][WP]K 8 -1 44.659 0.0 0.0 4.3209 0.0 0.0 63.99697093610275 0.0 63.99697093610275 0.0 29.17403451429223 0.0 0.0 0 1.424742501084005 0.0 1.305462187404089 0.2742275032520141 KTT[{I|L}P][WP]K 4.3209 - 348 + 1 2.22 83872.8 1.0 274 3946 4221 SUDHL4_400M_050219_2,4222 SUDHL4_400M_050219_2,4222,NQGLLSKMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4225 18.272 800.0 168820.0 25 0 62161.0 + -1 SCFYKTVRRRC 11 72 492.58191356662365 1474.723911300071 3 492.5818664431572 MULTI CID FTMS 0 0 0 4224 66195.5625 0.262899821552727 -11 0.0761985778808593 1 Carbamidomethyl (C) _SCFYKTVRRRC(Carbamidomethyl (C))_ REV__ENSG00000075290|ENST00000343737|WNT8B 2.434785330301024 0.8636604596255422 6 {[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MNG{I|L}G 9 -1 27.466 0.0 0.0 1.8624 0.0 0.0 0.0 572.2805878960272 572.2805878960272 13.971085147928411 0.0 0.0 0.0 0 1.305462187404089 1.0457574905606752 0.0 0.5114393726401688 {[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}MNG{I|L}G 1.8624 - 61 1 2.22 103140.2 0.3899999856948852 275 3948 4224 SUDHL4_400M_050219_2,4225 SUDHL4_400M_050219_2,4225,SCFYKTVRRRC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4228 18.286 425.0 176040.0 25 0 21038.0 + 42972 VVTPLEKKLY 10 92 397.2440158273132 1188.7102180821396 3 397.2443420290947 MULTI CID FTMS 0 0 0 4227 110378.34375 0.6053147147000989 -8 0.0654430389404296 1 Unmodified _VVTPLEKKLY_ REV__ENSG00000163938|ENST00000418458|GNL3;REV__ENST00000496254.5_1_3:52720087-52724795:+|nuORF;REV__nc|ENSG00000163938|Q9BVP2-2|GNL3 11.517880264261096 0.6542831674726655 6 VVY 3 -1 50.964 0.0 0.0 4.2874 0.0 0.0 0.0 824.4863197331277 824.4863197331277 35.07879262861516 0.0 0.0 0.0 0 0.4766445787094412 2.0 0.0 0.0 VVY 4.2874 - 80 + 1 2.22 66467.2 1.0 276 3950 4227 SUDHL4_400M_050219_2,4228 SUDHL4_400M_050219_2,4228,VVTPLEKKLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4229 18.3 800.0 87433.0 25 0 4303.2 + -1 TGYKWAEK 8 97 512.7566594849727 1023.4987660367456 2 512.7564575076103 MULTI CID FTMS 0 0 0 4227 93122.75 0.4203028383327424 -9 0.0818367004394531 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))TGYKWAEK_ REV__ENST00000464874.1_1_7:105515663-105517004:-|nuORF 24.020572477871973 0.5389365498350341 6 HVDAAEK 7 -1 62.427 0.0 0.0 6.0994 0.0 0.0 255.1224339423232 0.0 255.1224339423232 0.0 53.13563554718151 0.0 0.0 0 2.4489700043360187 0.0 0.5 0.3252574989159953 HVDAAEK 6.0994 - 230 + 1 2.22 59377.5 0.4199999868869781 277 3950 4227 SUDHL4_400M_050219_2,4229 SUDHL4_400M_050219_2,4229,TGYKWAEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4232 18.31 219.0 463510.0 25 0 56322.0 + 27500 PKHATAKN 8 88 433.7458719753147 865.4771910174294 2 433.7457153201103 MULTI CID FTMS 0 0 0 4231 356463.53125 0.0817387557584137 38 -0.3206939697265625 1 Unmodified _PKHATAKN_ REV__ENSG00000155966|ENST00000370460|AFF2;REV__nc|ENSG00000155966|P51816-2|AFF2;REV__nc|ENSG00000155966|P51816-3|AFF2;REV__nc|ENSG00000155966|P51816-5|AFF2;REV__nc|ENSG00000155966|P51816-6|AFF2;REV__nc|ENSG00000155966|P51816-7|AFF2 15.847184025352805 0.6768015514314958 6 [VG]PTQGTAA 9 -1 44.618 0.0 0.0 5.1553 0.0 0.0 0.0 80.05121027164296 80.05121027164296 34.696144486951255 0.0 0.0 0.0 0 1.024227503252014 1.6989700043360187 0.3494850021680094 0.0 [VG]PTQGTAA 5.1553 - 343 + 1 2.22 82109.9 1.0 278 3952 4231 SUDHL4_400M_050219_2,4232 SUDHL4_400M_050219_2,4232,PKHATAKN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4233 18.314 182.0 290760.0 25 0 33779.0 + 32558 SARGGGVAY 9 87 419.214627787238 836.414702641276 2 419.2143737673759 MULTI CID FTMS 0 0 0 4231 208217.546875 0.3743421865800106 11 -0.0864772796630859 2 Unmodified _SARGGGVAY_ ENST00000171111.9_2_19:10610689-10614227:-|nuORF;ENST00000591039.1_1_19:10610689-10613347:-|nuORF;ENST00000591419.2_2_19:10610689-10613347:-|nuORF;ENST00000592055.2_2_19:10610689-10613773:-|nuORF 13.90604991867851 0.4602628045680013 6 VAY 3 6 30.177 0.0 0.0 3.6079 0.0 0.0 485.2342701642594 0.0 485.2342701642594 0.0 23.187587626244124 0.0 0.0 0 1.0 0.0 0.0 0.0 + VAY 3.6079 + + 29 1 2.22 48052.8 1.0 279 3952 4231 SUDHL4_400M_050219_2,4233 SUDHL4_400M_050219_2,4233,SARGGGVAY False True SARGGGVAY 18.313711 419.214373767376 2577439.0 4231.0 ENST00000591039.1_1_19:10610689-10613347:-|nuORF;;ENST00000591419.2_2_19:10610689-10613347:-|nuORF;;ENST00000592055.2_2_19:10610689-10613773:-|nuORF;;ENST00000171111.9_2_19:10610689-10614227:-|nuORF 4.42750867207845 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4237 18.328 180.0 241530.0 25 0 29364.0 -1 NQCILISGE 9 76 517.2510986899904 1032.487644446781 2 517.2510253787041 MULTI CID FTMS 0 0 0 4236 123368.6953125 0.4029190723038892 -26 0.2064933776855468 1 Carbamidomethyl (C) _NQC(Carbamidomethyl (C))ILISGE_ ENSG00000145555|ENST00000513610|MYO10 11.640296217721598 0.521594087909532 6 A{M(Oxidation (M))|F}YK[HS] 6 -1 19.085 0.0 0.0 1.8485 0.0 0.0 281.1371327130875 0.0 281.1371327130875 0.0 2.095690636129892 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 A{M(Oxidation (M))|F}YK[HS] 1.8485 - 116 1 2.22 37466.7 1.0 280 3955 4236 SUDHL4_400M_050219_2,4237 SUDHL4_400M_050219_2,4237,NQCILISGE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4238 18.342 800.0 94905.0 25 0 13233.0 -1 SQQCYSEY 8 84 532.704850627282 1063.395148321364 2 532.7048217654228 MULTI CID FTMS 0 0 0 4236 96546.203125 1.0 0 0.0 2 Carbamidomethyl (C) _SQQC(Carbamidomethyl (C))YSEY_ nc|ENSG00000151914|Q03001-3|DST 7.910154910731844 0.7763180056447161 6 [VS]S 3 -1 23.222 0.0 0.0 2.1837 0.0 0.0 0.0 787.2394530911482 787.2394530911482 5.774509799928715 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VS]S 2.1837 - 85 1 2.22 60652.7 0.4399999976158142 281 3955 4236 SUDHL4_400M_050219_2,4238 SUDHL4_400M_050219_2,4238,SQQCYSEY False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 4242 18.361 512.0 192250.0 25 0 58447.0 + 15951 ITAKDSAKN 9 97 474.2621948363923 946.5098367395848 2 474.2619811892509 MULTI CID FTMS 0 0 0 4241 95790.4921875 0.4152327842674876 42 -0.3938179016113281 1 Unmodified _ITAKDSAKN_ REV__ENSG00000108469|ENST00000317905|RECQL5;REV__nc|ENSG00000108469|O94762-2|RECQL5;REV__nc|ENSG00000108469|O94762-3|RECQL5;REV__nc|ENSG00000108469|O94762-4|RECQL5 30.63653989081413 0.1413794767160703 6 [{I|L}T]AQSVSNK 9 -1 + 79.327 0.0 0.0 8.381 8.381 93.363 0.0 0.0 0.0 66.26303339656081 18.634740199865945 18.634740199865945 9.208187539523747 0 0.7742275032520141 2.0 0.3252574989159953 1.2638793319624575 [{I|L}T]AQSVSNK;[{I|L}T]A[AG]SVSNK;[{I|L}T]AQSVSGGK;[{I|L}T]A[AG]SVSGGK;[{I|L}T]AQSVVVM;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SVSQA[VP];[{I|L}T]A[{M(Oxidation (M))|F}T]QA[VP];[{I|L}T]A[AG]SVVVM;[{I|L}T]AQ[{M(Oxidation (M))|F}T]V[PA];[{I|L}A]YVSQA[VP] 8.381;7.4081;7.4081;6.4399;5.5858;4.8953;4.6339;4.1642;3.8644;3.6588 -;-;-;-;-;-;-;-;-;- 321 + 1 2.22 82002.5 1.0 282 3958 4241 SUDHL4_400M_050219_2,4242 SUDHL4_400M_050219_2,4242,ITAKDSAKN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4245 18.382 800.0 92545.0 25 0 9464.7 + -1 KPCLLLDPL 9 73 534.811771949743 1067.608990966286 2 534.8115722537041 MULTI CID FTMS 0 0 0 4244 42847.85546875 0.1714202311876039 -10 0.0897846221923828 1 Carbamidomethyl (C) _KPC(Carbamidomethyl (C))LLLDPL_ REV__ENST00000478182.5_1_3:119246651-119248702:-|nuORF 20.453626601364224 0.2830276176381075 6 KPTMRKQD 8 -1 47.6 0.0 0.0 4.4586 0.0 0.0 0.0 80.05122553043202 80.05122553043202 20.60525350536075 0.0 0.0 0.0 0 1.1237125054200234 0.0 0.4247425010840047 0.0 KPTMRKQD 4.4586 - 155 + 1 2.22 67307.6 0.449999988079071 283 3960 4244 SUDHL4_400M_050219_2,4245 SUDHL4_400M_050219_2,4245,KPCLLLDPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4249 18.401 453.0 159850.0 25 0 61205.0 -1 0 70 472.2729389878788 471.2656625212788 1 472.2727538943291 MULTI CID FTMS 0 0 0 4248 112383.234375 0.6584147190678292 27 -0.2342166900634765 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.22 63389.9 1.0 284 3963 4248 SUDHL4_400M_050219_2,4249 SUDHL4_400M_050219_2,4249, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4251 18.417 800.0 48944.0 25 0 10486.0 -1 0 42 1146.1432119459682 3435.4078064381047 3 1146.477832019329 MULTI CID FTMS 0 0 0 4250 131340.46875 0.4029530494758747 11 -0.0989532470703125 1 6 G 1 -1 6.9897 0.0 0.0 0.20346 0.0 0.0 1856.657463826161 1518.6929415338502 3375.350405360012 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20346 - 10 + 1 2.22 40165.3 0.4600000083446502 285 3964 4250 SUDHL4_400M_050219_2,4251 SUDHL4_400M_050219_2,4251, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4254 18.437 800.0 133100.0 25 0 16547.0 28123 PPPHPPPPP 9 91 466.7535142998673 931.4924756665346 2 466.7525817751884 MULTI CID FTMS 0 0 0 4253 120313.8828125 0.7613340574822359 -8 0.0711708068847656 1 Unmodified _PPPHPPPPP_ ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000175879|ENST00000313173|HOXD8;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000175879|P13378-2|HOXD8;REV__ENSG00000175879|ENST00000313173|HOXD8;REV__nc|ENSG00000175879|P13378-2|HOXD8 56.04830969593885 0.0282699710924866 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK] 8 4 + 39.625 0.0 0.0 4.2539 4.2539 78.403 0.0 0.0 0.0 5.0565842292838425 6.989700043360188 5.0565842292838425 5.0565842292838425 0 1.120371515030528 0.0 0.3807196863200844 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK];{[HG]|PP}HPPP[YK];[YK]HPP[YK];{[HG]|PP}PHPP[YK];{[NV]|[RG]}{[QS]|[NT]}PP[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]P[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YK][YK];{[HG]|PP}H[YK][YK] 4.2539;3.7111;3.4084;3.127;2.2404;1.5332;1.21;0.66719 -;-;-;-;-;-;-;- 130 1 2.22 87493.1 0.449999988079071 286 3966 4253 SUDHL4_400M_050219_2,4254 SUDHL4_400M_050219_2,4254,PPPHPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4255 18.442 250.0 273750.0 25 0 22613.0 + 34154 SLLYDSIVP 9 87 503.7745793992455 1005.534605865291 2 503.7745239138603 MULTI CID FTMS 0 0 0 4253 182899.65625 0.0425815494079023 -23 0.1947250366210937 2 Unmodified _SLLYDSIVP_ REV__ENSG00000197386|ENST00000355072|HTT 36.04419817259434 0.0971720506436186 6 VT{I|L}DTTQ[KT] 9 -1 + 80.812 0.0 0.0 8.0367 8.0367 93.014 0.0 0.0 0.0 57.10077508221467 4.137342758552691 4.137342758552691 9.208187539523747 0 0.4247425010840047 2.0 0.8494850021680094 0.4247425010840047 VT{I|L}DTTQ[KT];VT{I|L}DTT[AG][KT];VT{I|L}[WM]Q[KT];VT{I|L}DT[YV][VP];VT{I|L}DTVV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};VT{I|L}[WM][AG][KT] 8.0367;7.121;6.601;5.8738;5.7496;5.6799 -;-;-;-;-;- 241 + 1 2.22 57842.1 1.0 287 3966 4253 SUDHL4_400M_050219_2,4255 SUDHL4_400M_050219_2,4255,SLLYDSIVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4256 18.456 800.0 48254.0 25 0 6760.2 + -1 FWYNCWCYLPN 11 60 811.8314821236145 1621.6484113140289 2 811.8321411013603 MULTI CID FTMS 0 0 0 4253 103920.296875 0.5316653448774653 -4 0.0350990295410156 3 2 Carbamidomethyl (C) _FWYNC(Carbamidomethyl (C))WC(Carbamidomethyl (C))YLPN_ REV__ENST00000272542.7_1_2:113404910-113405027:+|nuORF 0.3070304955306653 0.8736993455979228 6 STQ 3 -1 38.06 0.0 0.0 2.347 0.0 0.0 1287.5004143431288 0.0 1287.5004143431288 0.0 -2.7916813960059983 -2.7916813960059983 0.0 0 0.0 0.0 0.6505149978319906 0.7742275032520141 STQ 2.347 - 302 + 1 2.22 34075.1 0.3899999856948852 288 3966 4253 SUDHL4_400M_050219_2,4256 SUDHL4_400M_050219_2,4256,FWYNCWCYLPN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4260 18.469 30.0 1712500.0 25 0 223630.0 + 17644 KPTAAFHLL 9 73 499.2930674051332 996.5715818770664 2 499.2930175662041 MULTI CID FTMS 0 0 0 4259 1876571.875 0.0305831869775144 54 -0.436981201171875 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 6 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3548678033811 667.3548678033811 27.808487663269965 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 24 + 1 2.22 45692.1 1.0 289 3969 4259 SUDHL4_400M_050219_2,4260 SUDHL4_400M_050219_2,4260,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4261 18.479 623.0 129200.0 25 0 13883.0 -1 KFAMFITL 8 102 493.7728389286585 985.531124924117 2 493.7720214724541 MULTI CID FTMS 0 0 0 4259 149407.65625 0.6566799871686955 -16 0.1501331329345703 2 Oxidation (M) _KFAM(Oxidation (M))FITL_ ENSG00000170522|ENST00000302274|ELOVL6 18.13498045792455 0.6430038125133779 6 NP[NS]VGN[{I|L}T] 9 -1 33.154 0.0 0.0 3.3641 0.0 0.0 71.07423598457187 0.0 71.07423598457187 0.0 11.81726699982422 0.0 0.0 0 0.2215141619232908 0.0 0.0 1.135151878060192 NP[NS]VGN[{I|L}T] 3.3641 - 438 1 2.22 66862.2 1.0 290 3969 4259 SUDHL4_400M_050219_2,4261 SUDHL4_400M_050219_2,4261,KFAMFITL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4274 18.54 800.0 90938.0 25 0 5797.9 + 31143 RLNSGSATY 9 108 484.74407279524576 967.4735926572916 2 484.7444335818291 MULTI CID FTMS 0 0 0 4273 65075.35546875 0.6946239406117121 -2 0.0081291198730468 1 Unmodified _RLNSGSATY_ ENST00000371368.5_1_1:54412201-54413639:+|nuORF 34.40172386719151 0.1061884637610825 6 [VG]{NN|[MP]|[D{I|L}]|[EV]}VMATY 9 5 + 60.01 0.0 0.0 6.2028 6.2028 80.595 0.0 0.0 0.0 1.5970084286751245 16.478174818886373 1.5970084286751245 1.5970084286751245 0 1.3494850021680094 1.0457574905606752 1.3996498648046138 0.0 [VG]{NN|[MP]|[D{I|L}]|[EV]}VMATY;[PS]{[TV]|[{I|L}S]}VMATY;[VG]{NN|[MP]|[D{I|L}]|[EV]}VVG{M(Oxidation (M))|F}Y;[PS]{[TV]|[{I|L}S]}VVG{M(Oxidation (M))|F}Y;[QA]TA[WK]TY;[DV]R{I|L}MATY;[KG]{[QG]|[NA]}{I|L}MATY;[DV]{[WT]|[RM]}{I|L}ATY;[QP]GAS[QA]N[VP];[{I|L}T]N[QA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y 6.2028;6.0377;4.1269;3.9619;3.4782;3.3444;2.954;2.3622;2.1888;1.5164 -;-;-;-;-;-;-;-;-;- 380 1 2.22 58115.3 0.4099999964237213 291 3981 4273 SUDHL4_400M_050219_2,4274 SUDHL4_400M_050219_2,4274,RLNSGSATY True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4280 18.573 800.0 70535.0 25 0 5164.1 + 11036 GAYREHPYGRY 11 72 456.8862362918049 1367.6368794756147 3 456.8859741091728 MULTI CID FTMS 0 0 0 4279 32548.734375 0.3742397286225297 1 -0.016357421875 1 Unmodified _GAYREHPYGRY_ ENSG00000121774|ENST00000327300|KHDRBS1;ENST00000307714.12_1_1:32503693-32508222:+|nuORF;nc|ENSG00000121774|Q07666-2|KHDRBS1;nc|ENSG00000121774|Q07666-3|KHDRBS1 13.534932898082838 0.7536045057035061 6 PYY{[NV]|[RG]} 5 7 20.445 0.0 0.0 1.4949 0.0 0.0 713.3242243478255 0.0 713.3242243478255 0.0 9.336068845642204 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 PYY{[NV]|[RG]} 1.4949 - 202 + 1 2.22 52160.5 0.4099999964237213 292 3986 4279 SUDHL4_400M_050219_2,4280 SUDHL4_400M_050219_2,4280,GAYREHPYGRY False True GAYREHPYGRY 18.572528 456.885974109173 411528.125 4279.0 nc|ENSG00000121774|Q07666-3|KHDRBS1;;ENST00000307714.12_1_1:32503693-32508222:+|nuORF;;ENSG00000121774|ENST00000327300|KHDRBS1;;nc|ENSG00000121774|Q07666-2|KHDRBS1 5.848153750101726 3.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4283 18.593 800.0 100130.0 25 0 5559.5 -1 0 52 636.7822261612338 2543.099798778535 4 637.0340453982353 MULTI CID FTMS 0 0 0 4282 55347.17578125 0.3044856548168162 -5 0.0326137542724609 1 6 DD 2 -1 20.969 0.0 0.0 0.82455 0.0 0.0 744.3317177179448 1565.6970055126951 2310.02872323064 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 DD 0.82455 - 25 + 1 2.22 68863.2 0.3600000143051147 293 3988 4282 SUDHL4_400M_050219_2,4283 SUDHL4_400M_050219_2,4283, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4284 18.596 164.0 265420.0 25 0 26523.0 + 26244 NQKPPSAEY 9 77 517.2510986899904 1032.487644446781 2 517.2507812380791 MULTI CID FTMS 0 0 0 4282 210070.15625 0.6860838745240989 7 -0.1193904876708984 2 Unmodified _NQKPPSAEY_ ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1 19.256988751693697 0.3154191944385105 6 Y 1 8 21.99 0.0 0.0 2.1298 0.0 0.0 851.4135152737323 0.0 851.4135152737323 0.0 4.977568795947672 0.0 0.0 0 0.5 0.0 0.0 0.0 + Y 2.1298 + + 97 + 1 2.22 40454.3 1.0 294 3988 4282 SUDHL4_400M_050219_2,4284 SUDHL4_400M_050219_2,4284,NQKPPSAEY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4285 18.606 579.0 136390.0 25 0 14017.0 + 13361 HLGPEGRSV 9 83 476.2535467001412 950.4925404670824 2 476.2528564333916 MULTI CID FTMS 0 0 0 4282 96104.3359375 0.7424859045826011 5 -0.0989665985107421 3 Unmodified _HLGPEGRSV_ nc|ENSG00000291317|P0DTL5|TMEM276 17.11289562659939 0.3734572693229295 6 H{I|L}GW 4 6 55.09 0.0 0.0 5.7959 0.0 0.0 0.0 454.2273958795532 454.2273958795532 49.6051149383741 0.0 0.0 0.0 0 1.0387254899964358 1.6989700043360187 0.0 0.0 H{I|L}GW 5.7959 - 36 + 1 2.22 64045.0 1.0 295 3988 4282 SUDHL4_400M_050219_2,4285 SUDHL4_400M_050219_2,4285,HLGPEGRSV False True HLGPEGRSV 18.606328 476.252856433392 663504.5 4282.0 nc|ENSG00000291317|P0DTL5|TMEM276 5.719467004140218 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 4286 18.62 800.0 91768.0 25 0 20264.0 898 AEYASLMEILY 11 69 434.8819857597532 0 434.8822204470634 PEAK CID FTMS 0 0 0 4282 78899.6484375 0.7697784247506453 -11 0.0689506530761718 4 Unmodified _AEYASLMEILY_ ENSG00000168434|ENST00000307149|COG7 3.2813086475875832 0.4761840153648598 6 H 1 11 5.4846 0.0 0.0 0.63204 0.0 0.0 296.4527399747814 431.2287691705688 727.6815091453502 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.63204 - 5 + 1 2.22 64943.2 0.3700000047683716 296 3988 4282 SUDHL4_400M_050219_2,4286 SUDHL4_400M_050219_2,4286,AEYASLMEILY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4289 18.636 505.0 187580.0 25 0 20993.0 + -1 KPCLLLDPL 9 88 534.811771949743 1067.608990966286 2 534.8118163943291 MULTI CID FTMS 0 0 0 4288 206642.375 0.8267084386869769 20 -0.1929340362548828 1 Carbamidomethyl (C) _KPC(Carbamidomethyl (C))LLLDPL_ REV__ENST00000478182.5_1_3:119246651-119248702:-|nuORF 14.838274106304384 0.4350285940865338 6 KPTG 4 -1 45.433 0.0 0.0 4.2556 0.0 0.0 0.0 681.3690279596311 681.3690279596311 20.194093936868285 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTG 4.2556 - 73 + 1 2.22 78998.1 1.0 297 3990 4288 SUDHL4_400M_050219_2,4289 SUDHL4_400M_050219_2,4289,KPCLLLDPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4290 18.641 307.0 217420.0 25 0 44715.0 + 16538 KAVNPGRSL 9 69 471.2800432285685 940.545533523937 2 471.2795287966728 MULTI CID FTMS 0 0 0 4288 134273.859375 0.4457887606494079 -10 0.1045513153076171 2 Unmodified _KAVNPGRSL_ ENSG00000103429|ENST00000261658|BFAR;nc|ENSG00000103429|Q9NZS9-2|BFAR 23.78978130925829 0.2284941198415988 6 KAVNP 5 4 45.054 0.0 0.0 4.7902 0.0 0.0 0.0 428.2280672662719 428.2280672662719 34.67528006283997 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 + KAVNP 4.7902 + + 240 + 1 2.22 57067.6 1.0 298 3990 4288 SUDHL4_400M_050219_2,4290 SUDHL4_400M_050219_2,4290,KAVNPGRSL False True KAVNPGRSL 18.641276 471.279528796673 1293151.875 4288.0 nc|ENSG00000103429|Q9NZS9-2|BFAR;;ENSG00000103429|ENST00000261658|BFAR 5.9982523918151855 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4291 18.655 800.0 116200.0 25 0 7979.7 -1 0 39 509.6276512105021 2543.1018737195104 5 510.0280334353447 MULTI CID FTMS 0 0 0 4288 74584.0546875 0.6520877512192716 -2 0.0476188659667968 3 6 W 1 -1 6.9897 0.0 0.0 0.27485 0.0 0.0 1938.824360147048 415.17380701236567 2353.9981671594137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.27485 - 2 + 1 2.22 79764.5 0.3899999856948852 299 3990 4288 SUDHL4_400M_050219_2,4291 SUDHL4_400M_050219_2,4291, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4294 18.676 800.0 43529.0 25 0 13186.0 -1 0 33 1146.1430020316764 3435.4071766952293 3 1146.476489245892 MULTI CID FTMS 0 0 0 4293 133760.71875 0.8216553723700977 -7 0.1070461273193359 1 6 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.3193 0.0 0.0 1709.5937766339175 1518.7030187459166 3228.2967953798343 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.3193 - 20 + 1 2.22 38640.4 0.3100000023841858 300 3992 4293 SUDHL4_400M_050219_2,4294 SUDHL4_400M_050219_2,4294, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4297 18.696 800.0 138910.0 25 0 15006.0 28082 PPHPPPPPP 9 109 466.7535142998673 931.4924756665346 2 466.7527038455009 MULTI CID FTMS 0 0 0 4296 87756.0390625 0.5553113217378546 20 -0.16607666015625 1 Unmodified _PPHPPPPPP_ ENSG00000048991|ENST00000683871|R3HDM1;ENSG00000066855|ENST00000262146|MTFR1;ENSG00000163064|ENST00000295206|EN1;ENSG00000175879|ENST00000313173|HOXD8;ENST00000261716.7_1_17:27717806-27778530:+|nuORF;ENST00000424808.6_1_8:66582187-66620357:+|nuORF;nc|ENSG00000048991|Q15032-2|R3HDM1;nc|ENSG00000048991|Q15032-3|R3HDM1;nc|ENSG00000048991|Q15032-4|R3HDM1;nc|ENSG00000048991|Q15032|R3HDM1;nc|ENSG00000066855|Q15390-2|MTFR1;nc|ENSG00000175879|P13378-2|HOXD8;REV__nc|ENSG00000182095|O15417-2|TNRC18 56.04830969593885 0.0282699710924866 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK] 8 3 + 34.773 0.0 0.0 3.733 3.733 71.934 0.0 0.0 0.0 1.1932554326627098 6.989700043360191 1.1932554326627098 1.1932554326627098 0 0.9634679910804403 0.0 0.2742275032520141 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PPPP[YK];{[HG]|PP}HPPP[YK];[YK]HPP[YK];{[HG]|PP}PHPP[YK];{[NV]|[RG]}{[QS]|[NT]}PP[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]P[YK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[YK][YK];{[HG]|PP}H[YK][YK];{[TV]|[{I|L}S]}V[WH][YK] 3.733;3.6049;3.0292;2.8101;1.8829;1.1155;0.77675;0.64865;0.26322 -;-;-;-;-;-;-;-;- 144 1 2.22 95074.2 0.4399999976158142 301 3994 4296 SUDHL4_400M_050219_2,4297 SUDHL4_400M_050219_2,4297,PPHPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4299 18.701 27.0 1437400.0 25 0 141410.0 + 34155 SLLYDSIVP 9 53 503.7745793992455 1005.534605865291 2 503.7743713259697 MULTI CID FTMS 0 0 0 4298 1816207.0 0.4228379084527561 6 -0.0517578125 1 Unmodified _SLLYDSIVP_ REV__ENSG00000197386|ENST00000355072|HTT 28.486842064014134 0.1687311288560894 6 VT{I|L}DT 5 -1 64.949 0.0 0.0 6.4591 0.0 0.0 0.0 473.2370699518188 473.2370699518188 48.29303772831025 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 VT{I|L}DT 6.4591 - 138 + 1 2.22 34014.5 1.0 302 3995 4298 SUDHL4_400M_050219_2,4299 SUDHL4_400M_050219_2,4299,SLLYDSIVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4303 18.725 800.0 166130.0 25 0 25711.0 + 12034 GQAPPGKAL 9 115 419.7427211486034 0 419.7426330447197 PEAK CID FTMS 0 0 0 4302 121213.5234375 0.9610915809987792 30 -0.2330913543701172 1 Unmodified _GQAPPGKAL_ ENSG00000013573|ENST00000542838|DDX11;ENST00000435753.6_1_12:31250908-31256767:+|nuORF;ENST00000536265.5_1_12:31242773-31256767:+|nuORF;nc|ENSG00000013573|Q96FC9-3|DDX11;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000256263|A8MPP1|DDX11L8 24.020572477871973 0.1646235280836931 6 AP 2 7 20.969 0.0 0.0 2.5039 0.0 0.0 185.0788128032632 481.2786741392931 666.3574869425563 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 + AP 2.5039 + + 47 + 1 2.22 109504.4 0.449999988079071 303 3998 4302 SUDHL4_400M_050219_2,4303 SUDHL4_400M_050219_2,4303,GQAPPGKAL False True GQAPPGKAL 18.725078 419.74263304472 5185885.0 4302.0 nc|ENSG00000013573|Q96FC9-3|DDX11;;nc|ENSG00000013573|Q96FC9-4|DDX11;;ENSG00000013573|ENST00000542838|DDX11;;nc|ENSG00000256263|A8MPP1|DDX11L8;;ENST00000435753.6_1_12:31250908-31256767:+|nuORF;;ENST00000536265.5_1_12:31242773-31256767:+|nuORF 7.264331976572673 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4304 18.739 800.0 114940.0 25 0 20893.0 + -1 KLNPYAKTMR 10 99 413.2287639674178 1236.6644625024535 3 413.2288390994072 MULTI CID FTMS 0 0 0 4302 80000.21875 1.0 0 0.0 2 Oxidation (M) _KLNPYAKTM(Oxidation (M))R_ ENSG00000174444|ENST00000307961|RPL4;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;ENST00000567229.5_1_15:66791747-66793486:-|nuORF 15.538449434065043 0.58682192184891 6 K{[QV]|[N{I|L}]|[RA]|[KV]}[VP]AH{I|L}C 9 -1 16.833 0.0 0.0 1.3611 0.0 0.0 64.00135145654606 194.09389673404533 258.0952481905914 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.5 K{[QV]|[N{I|L}]|[RA]|[KV]}[VP]AH{I|L}C 1.3611 - 253 + 1 2.22 80263.0 0.8799999952316284 304 3998 4302 SUDHL4_400M_050219_2,4304 SUDHL4_400M_050219_2,4304,KLNPYAKTMR False False KLNPYAKTMR 18.73889 413.228839099407 1471592.125 4302.0 ENSG00000174444|ENST00000307961|RPL4;;ENST00000422486.1_1_3:185135285-185135612:-|nuORF;;ENST00000567229.5_1_15:66791747-66793486:-|nuORF 3.2737015883127847 3.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4306 18.744 86.0 569480.0 25 0 72880.0 + 17645 KPTAAFHLL 9 60 499.2930674051332 996.5715818770664 2 499.2930480837822 MULTI CID FTMS 0 0 0 4305 608736.125 0.0099207981206915 84 -0.6985092163085938 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 6 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3539709747985 667.3539709747985 29.41515096531488 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 24 + 1 2.22 43249.2 1.0 305 3999 4305 SUDHL4_400M_050219_2,4306 SUDHL4_400M_050219_2,4306,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4309 18.753 114.0 527300.0 25 0 86252.0 + 14777 ILDKKVEKV 9 85 357.8973258787533 1070.67014823646 3 357.8971740603447 MULTI CID FTMS 0 0 0 4308 447557.25 0.1685588349498474 -15 0.1915664672851562 1 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 21.799462835604743 0.2538179108695974 6 {I|L}{I|L}DKKVEKV 9 0 + 68.554 0.0 0.0 6.4029 6.4029 87.738 0.0 0.0 0.0 54.19592522764098 10.238956344972934 10.238956344972934 8.41129063296271 0 0.2742275032520141 2.0 0.0 0.5 + + {I|L}{I|L}DKKVEKV;{I|L}{I|L}V[SG]KVEKV;{I|L}{I|L}VDKKEKV;{I|L}{I|L}DVKKEKV 6.4029;5.6173;5.4039;5.3295 +;-;-;- + 99 + 1 2.22 54924.6 1.0 306 4001 4308 SUDHL4_400M_050219_2,4309 SUDHL4_400M_050219_2,4309,ILDKKVEKV False True ILDKKVEKV 18.752665 357.897174060345 28195100.5 4308.0 nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1 5.442660331726074 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4310 18.767 800.0 203370.0 25 0 16520.0 + 14779 ILDKKVEKV 9 116 536.3424905190626 1070.6704281049251 2 536.3423950076103 MULTI CID FTMS 0 0 0 4308 144062.296875 0.1862342366231718 -12 0.1275978088378906 2 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 59.17704102725264 0.0265377155841051 6 {I|L}{I|L}DKKVEKV 9 0 + 98.787 0.0 0.0 9.2267 9.2267 87.702 0.0 0.0 0.0 29.39358432901716 3.004276450947956 3.004276450947956 3.004276450947956 0 2.4291746928241125 2.0 1.0189301784845295 0.2302046884880938 + + {I|L}{I|L}DKKVEKV;{I|L}{I|L}DKKVEVK;{I|L}{I|L}V[SG]KVEKV;{I|L}{I|L}V[SG]KVEVK;{I|L}{I|L}DKKD{I|L}KV;{I|L}{I|L}DKKDK{I|L}V;V{[QN]|[E{I|L}]|[KN]}KKVEKV;{I|L}{I|L}DKKV[SG]{I|L}V;V{[QN]|[E{I|L}]|[KN]}KKVEVK;{I|L}{I|L}DKKDKV{I|L} 9.2267;8.9461;7.7138;7.4332;5.916;5.7249;5.617;5.4302;5.3364;4.9941 +;-;-;-;-;-;-;-;-;- + 1717 + 1 2.22 129189.1 0.5400000214576721 307 4001 4308 SUDHL4_400M_050219_2,4310 SUDHL4_400M_050219_2,4310,ILDKKVEKV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4312 18.784 800.0 112840.0 25 0 20752.0 + 37263 TINGHNAEV 9 105 477.7355871917829 953.456621450366 2 477.7357055544853 MULTI CID FTMS 0 0 0 4311 124522.1484375 0.841049408773979 2 -0.0215721130371093 1 Unmodified _TINGHNAEV_ ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;ENST00000495810.1_1_7:26235422-26236427:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1 24.99096001346401 0.2132109383330889 6 [{I|L}T][{M(Oxidation (M))|F}V]ANG 7 6 42.942 0.0 0.0 4.5039 0.0 0.0 0.0 248.0794466608032 248.0794466608032 27.457734666609504 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.9698565171985376 [{I|L}T][{M(Oxidation (M))|F}V]ANG 4.5039 - 387 + 1 2.22 79762.3 0.5199999809265137 308 4002 4311 SUDHL4_400M_050219_2,4312 SUDHL4_400M_050219_2,4312,TINGHNAEV False True TINGHNAEV 18.784179 477.735705554485 531499.875 4311.0 ENST00000495810.1_1_7:26235422-26236427:-|nuORF;;ENSG00000122566|ENST00000618183|HNRNPA2B1;;nc|ENSG00000122566|P22626|HNRNPA2B1;;ENST00000463181.5_1_7:26232138-26237376:-|nuORF 5.863654454549153 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4315 18.797 352.0 324060.0 25 0 67713.0 -1 0 90 464.2523096581675 463.24503319156753 1 466.2575561404228 MULTI CID FTMS 0 0 0 4314 104460.3203125 0.8257113241564445 -1 0.0038909912109375 1 6 Y 1 -1 11.99 0.0 0.0 2.5882 0.0 0.0 282.17067513668314 0.0 282.17067513668314 0.0 1.712113404111033 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5882 - 18 + 1 2.22 89999.6 1.0 309 4004 4314 SUDHL4_400M_050219_2,4315 SUDHL4_400M_050219_2,4315, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4323 18.838 800.0 87330.0 25 0 11922.0 28240 PQQPAAYAL 9 102 479.7513246275786 957.4880963219572 2 479.7510253787041 MULTI CID FTMS 0 0 0 4322 64533.2578125 0.2233498877498939 -21 0.1969985961914062 1 Unmodified _PQQPAAYAL_ ENSG00000157303|ENST00000375472|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;nc|ENSG00000157303|Q96L08-3|SUSD3 23.1484247019978 0.2366544122328345 6 PQD 3 7 55.49 0.0 0.0 5.7953 0.0 0.0 0.0 614.325643029557 614.325643029557 43.01538440272459 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.3494850021680094 PQD 5.7953 - 88 + 1 2.22 58394.3 0.4300000071525574 310 4011 4322 SUDHL4_400M_050219_2,4323 SUDHL4_400M_050219_2,4323,PQQPAAYAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4331 18.873 474.0 235050.0 25 0 42904.0 + 29164 VQRNHETAF 9 117 367.85416019622136 1100.540651188864 3 368.1895629763603 MULTI CID FTMS 0 0 0 4330 69324.359375 0.7021757631749185 -6 0.0242156982421875 1 Unmodified _QFTLIMMAF_ ENSG00000143384|ENST00000369026|MCL1;nc|ENSG00000143384|Q07820-2|MCL1 11.640296217721598 0.521594087909532 6 ETA{M(Oxidation (M))|F} 4 6 21.37 0.0 0.0 1.9418 0.0 0.0 634.3287601135918 0.0 634.3287601135918 0.0 5.885540741363187 0.0 0.0 0 0.3182503180159344 0.0 0.5 0.0 ETA{M(Oxidation (M))|F} 1.9418 - 32 1 2.22 95603.2 1.0 311 4018 4330 SUDHL4_400M_050219_2,4331 SUDHL4_400M_050219_2,4331,QFTLIMMAF False False VQRNHETAF 18.872712 368.18956297636 438562.21875 4330.0 ENSG00000143384|ENST00000369026|MCL1;;nc|ENSG00000143384|Q07820-2|MCL1 3.4344777266184487 3.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4332 18.877 204.0 283780.0 25 0 81232.0 -1 0 77 427.2207461052786 426.2134696386786 1 427.2201110720634 MULTI CID FTMS 0 0 0 4330 278519.03125 0.7965601712630345 -11 0.0568313598632812 2 6 [DP][VP] 4 -1 + -0.68186 0.0 0.0 -0.15998 -0.15998 0.024091 0.0 0.0 0.0 -0.6818586174616204 -0.6818586174616204 -0.6818586174616204 -0.6818586174616204 0 0.0 0.0 0.0 0.0 [DP][VP] -0.15998 - 3 + 1 2.22 52073.0 1.0 312 4018 4330 SUDHL4_400M_050219_2,4332 SUDHL4_400M_050219_2,4332, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4337 18.901 549.0 153380.0 25 0 72786.0 -1 0 67 472.2724875299272 471.2652110633272 1 472.2722350955009 MULTI CID FTMS 0 0 0 4336 138279.09375 0.9522057355957808 9 -0.0716285705566406 1 6 P 1 -1 3.0989 0.0 0.0 0.65758 0.0 0.0 246.11715305727097 125.0723360651 371.18948912237096 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.65758 - 6 + 1 2.22 72138.0 1.0 313 4022 4336 SUDHL4_400M_050219_2,4337 SUDHL4_400M_050219_2,4337, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4342 18.924 471.0 135240.0 25 0 66761.0 -1 0 57 470.25699181459856 469.2497153479986 1 470.2569763064384 MULTI CID FTMS 0 0 0 4341 115412.9609375 0.5507298908975518 -65 0.5311450958251953 1 6 S 1 -1 3.9794 0.0 0.0 0.84803 0.0 0.0 283.11233849428606 96.08241449527576 379.1947529895618 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.84803 - 3 + 1 2.22 54374.3 1.0 314 4026 4341 SUDHL4_400M_050219_2,4342 SUDHL4_400M_050219_2,4342, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4343 18.938 800.0 26428.0 25 0 8524.1 -1 0 22 1102.1037751095676 3303.289495928903 3 1102.439135730267 MULTI CID FTMS 0 0 0 4341 69453.4921875 0.669840720404235 -8 0.0512313842773437 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 31183.0 0.2899999916553497 315 4026 4341 SUDHL4_400M_050219_2,4343 SUDHL4_400M_050219_2,4343, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4348 18.96 439.0 172860.0 25 0 25154.0 + 42517 VTLDSPVLY 9 76 503.7745793992455 1005.534605865291 2 503.7745849490166 MULTI CID FTMS 0 0 0 4347 113784.6640625 0.0264906309502094 41 -0.354888916015625 1 Unmodified _VTLDSPVLY_ REV__ENSG00000139112|ENST00000266458|GABARAPL1;REV__ENSG00000170296|ENST00000302386|GABARAP;REV__nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 34.10243960390752 0.1078313939113124 6 VT{I|L}DTTQTK 9 -1 + 77.611 0.0 0.0 7.7184 7.7184 92.532 0.0 0.0 0.0 63.63150886449748 8.59526940462149 8.59526940462149 9.208187539523747 0 0.4247425010840047 2.0 0.4247425010840047 0.0 VT{I|L}DTTQTK;VT{I|L}DTT[AG]TK;VT{I|L}DTT[KT]Q;VT{I|L}[WM]QTK;VT{I|L}[WM][AG]TK;VT{I|L}DT[YV][VP];VT{I|L}[WM][KT]Q 7.7184;6.8026;6.3699;6.3492;5.4281;5.0189;5.0007 -;-;-;-;-;-;- 155 + 1 2.22 67994.7 1.0 316 4030 4347 SUDHL4_400M_050219_2,4348 SUDHL4_400M_050219_2,4348,VTLDSPVLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4354 18.993 800.0 150610.0 25 0 26737.0 + 17017 KKGAKGGS 8 131 366.7216397474466 0 366.7217285037041 PEAK CID FTMS 0 0 0 4353 81241.65625 0.8722491030219406 1 -0.0163841247558593 1 Unmodified _KKGAKGGS_ REV__ENST00000479896.1_1_10:129869671-129881167:+|nuORF 0.0 0.6010389664953673 6 G 1 -1 4.6041 0.0 0.0 0.62947 0.0 0.0 308.2257979501682 363.1560152643188 671.381813214487 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.62947 + + 5 + 1 2.22 97834.1 0.959999978542328 317 4035 4353 SUDHL4_400M_050219_2,4354 SUDHL4_400M_050219_2,4354,KKGAKGGS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4357 19.009 564.0 156900.0 25 0 20898.0 + 17688 KPTGARPSAL 10 82 499.2930674051332 996.5715818770664 2 499.2931396365166 MULTI CID FTMS 0 0 0 4356 144545.40625 0.0023557100290041 122 -1.0664520263671875 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 18.373094154950223 0.5392593366289069 6 KPTG 4 6 45.433 0.0 0.0 4.5589 0.0 0.0 0.0 610.3266085260374 610.3266085260374 33.65031366427216 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPTG 4.5589 + + 39 + 1 2.22 70864.0 1.0 318 4037 4356 SUDHL4_400M_050219_2,4357 SUDHL4_400M_050219_2,4357,KPTGARPSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4358 19.019 563.0 173230.0 25 0 66897.0 -1 0 82 418.225777601156 417.2185011345561 1 418.2252685427666 MULTI CID FTMS 0 0 0 4356 167956.125 0.8150533084931906 -15 0.1079826354980468 2 6 Y 1 -1 11.99 0.0 0.0 2.8737 0.0 0.0 236.1445703257654 0.0 236.1445703257654 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.8737 - 13 + 1 2.22 82284.9 1.0 319 4037 4356 SUDHL4_400M_050219_2,4358 SUDHL4_400M_050219_2,4358, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4360 19.026 150.0 490000.0 25 0 76156.0 + 14778 ILDKKVEKV 9 97 357.8973258787533 1070.67014823646 3 357.8971740603447 MULTI CID FTMS 0 0 0 4359 328406.65625 0.1236843853323235 22 -0.1936378479003906 1 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 21.799462835604743 0.2538179108695974 6 {I|L}{I|L}DKKVEKV 9 0 + 69.933 0.0 0.0 6.5317 6.5317 62.232 0.0 0.0 0.0 36.47817481888638 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.2742275032520141 0.5 + + {I|L}{I|L}DKKVEKV;{I|L}{I|L}DKKVEVK;{I|L}{I|L}V[SG]KVEVK;{I|L}{I|L}V[SG]KVEKV;{I|L}VEKKVEVK;{I|L}VEKKVEKV;{I|L}V{I|L}[SG]KVEVK;{I|L}V{I|L}[SG]KVEKV 6.5317;6.5317;5.6227;5.6227;4.3587;4.3587;3.4497;3.4497 +;-;-;-;-;-;-;- + 206 + 1 2.22 64807.1 1.0 320 4038 4359 SUDHL4_400M_050219_2,4360 SUDHL4_400M_050219_2,4360,ILDKKVEKV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4361 19.04 800.0 118780.0 25 0 13956.0 + 14780 ILDKKVEKV 9 97 536.3424905190626 1070.6704281049251 2 536.3423950076103 MULTI CID FTMS 0 0 0 4359 126568.296875 0.163619147136485 25 -0.2201118469238281 2 Unmodified _ILDKKVEKV_ ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P 38.558800761779466 0.0833680625411826 6 {I|L}{I|L}DKKVEKV 9 0 + 76.781 0.0 0.0 7.1713 7.1713 93.857 0.0 0.0 0.0 27.90176364829336 7.632192780232785 7.632192780232785 14.035984316004216 0 1.2346368802282015 2.0 0.7302046884880937 0.0 + + {I|L}{I|L}DKKVEKV;{I|L}{I|L}V[SG]KVEKV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KDK{I|L}{I|L}V;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KD{I|L}{I|L}KV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KD{I|L}K{I|L}V;VE{I|L}KKVEKV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}KKD{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}KKDK{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}KKD{I|L}{I|L}KV;{NN|[MP]|[D{I|L}]|[EV]}KKD{I|L}K{I|L}V 7.1713;5.8603;3.3461;3.2972;3.1816;3.173;2.9005;2.6247;2.5757;2.4602 +;-;-;-;-;-;-;-;-;- + 290 + 1 2.22 79762.2 0.6000000238418579 321 4038 4359 SUDHL4_400M_050219_2,4361 SUDHL4_400M_050219_2,4361,ILDKKVEKV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4364 19.06 800.0 120430.0 25 0 12468.0 17742 KPYPKKPPN 9 76 534.8118095620911 1067.609066190982 2 534.8123046755791 MULTI CID FTMS 0 0 0 4363 78058.546875 0.181115583479479 -10 0.0936317443847656 1 Unmodified _KPYPKKPPN_ ENSG00000035499|ENST00000265036|DEPDC1B;ENST00000512078.5_1_5:59893582-59984814:-|nuORF;nc|ENSG00000035499|Q8WUY9-2|DEPDC1B 14.838274106304384 0.4350285940865338 6 KPTGAP 6 6 54.641 0.0 0.0 5.1181 0.0 0.0 0.0 513.2669161432249 513.2669161432249 28.610469015915783 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTGAP 5.1181 - 111 + 1 2.22 81216.3 0.4699999988079071 322 4040 4363 SUDHL4_400M_050219_2,4364 SUDHL4_400M_050219_2,4364,KPYPKKPPN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4365 19.072 713.0 101330.0 25 0 6906.3 + 2771 ATPLELMSY 9 106 512.7565259240597 1023.4984989149194 2 512.7570068240166 MULTI CID FTMS 0 0 0 4363 140373.109375 1.0 0 0.0 2 Unmodified _ATPLELMSY_ REV__ENSG00000139187|ENST00000356986|KLRG1;REV__nc|ENSG00000139187|Q96E93|KLRG1 21.74664581756881 0.2544899275067181 6 [YK]{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}VSY 8 -1 [YK]{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}V + + 32.519 -0.87029 -0.11521 3.1772 3.1772 51.897 0.0 0.0 0.0 0.0 19.035385087241146 0.0 0.0 0 0.805462187404089 0.0 0.3494850021680094 0.0 [YK]{M(Oxidation (M))|F}{[MS]|[{M(Oxidation (M))|F}A]}VSY 3.1772 - 194 + 1 2.22 60352.3 1.0 323 4040 4363 SUDHL4_400M_050219_2,4365 SUDHL4_400M_050219_2,4365,ATPLELMSY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4366 19.085 716.0 112960.0 25 0 6189.8 + 30348 RAFPNKQGY 9 91 540.7830949140231 1079.551636894846 2 540.7829467654228 MULTI CID FTMS 0 0 0 4363 120463.8671875 0.3693352290435918 -89 0.7439403533935547 3 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 78.14939416004806 0.0179651292570206 6 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY 9 0 + 56.594 0.0 0.0 5.2424 5.2424 85.775 0.0 0.0 0.0 6.395067726032551 45.17967338337931 6.395067726032551 9.208187539523747 0 1.7931576817365436 0.0 0.0 1.1549471895720984 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]K[AG]GY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]VRQGY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]V[VG]QGY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]VR[AG]GY 5.2424;4.3894;3.3551;2.5022;2.5022 +;-;-;-;- + 152 1 2.22 66352.3 1.0 324 4040 4363 SUDHL4_400M_050219_2,4366 SUDHL4_400M_050219_2,4366,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4368 19.102 800.0 73088.0 25 0 12063.0 28241 PQQPAAYAL 9 78 479.7513246275786 957.4880963219572 2 479.7506896853447 MULTI CID FTMS 0 0 0 4367 90076.34375 0.3117546199811786 9 -0.0722179412841796 1 Unmodified _PQQPAAYAL_ ENSG00000157303|ENST00000375472|SUSD3;nc|ENSG00000157303|Q96L08-2|SUSD3;nc|ENSG00000157303|Q96L08-3|SUSD3 23.1484247019978 0.2366544122328345 6 PQD 3 7 53.729 0.0 0.0 5.6114 0.0 0.0 0.0 614.3270582155209 614.3270582155209 40.62977812912628 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.0 0.4247425010840047 PQD 5.6114 - 26 + 1 2.22 51474.0 0.5 325 4041 4367 SUDHL4_400M_050219_2,4368 SUDHL4_400M_050219_2,4368,PQQPAAYAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4369 19.113 573.0 171530.0 25 0 67192.0 42120 VRQGLSRSL 9 71 508.3044557705364 1014.5943586078728 2 508.3065978884697 MULTI CID FTMS 0 0 0 4367 92771.890625 0.6361058977829612 -7 0.1125068664550781 2 Unmodified _VRQGLSRSL_ ENSG00000241935|ENST00000370646|HOGA1;ENST00000465608.1_1_10:99344436-99359039:+|nuORF;nc|ENSG00000241935|Q86XE5-3|HOGA1 5.731851221503515 0.7145881442174411 6 {I|L} 1 8 11.259 0.0 0.0 1.1097 0.0 0.0 883.4995537756447 0.0 883.4995537756447 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1097 + + 18 + 1 2.22 80165.9 1.0 326 4041 4367 SUDHL4_400M_050219_2,4369 SUDHL4_400M_050219_2,4369,VRQGLSRSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4374 19.141 800.0 131410.0 25 0 13778.0 + 16476 KAISGVHTV 9 123 456.26827798529314 910.5220030373864 2 456.2679626345634 MULTI CID FTMS 0 0 0 4373 70881.234375 0.4878886593179344 -6 0.0848731994628906 1 Unmodified _KAISGVHTV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 118.0683919894846 0.0022886718041725 6 KA{I|L}S[VG]HTV 9 0 + 66.796 0.0 0.0 7.336 7.336 90.159 0.0 0.0 0.0 47.79964324350276 4.153258167475357 4.153258167475357 8.57533693750294 0 2.610924374808178 0.0 2.0693415193665468 0.0 + + KA{I|L}S[VG]HTV;[KA]{I|L}S[VG]HTV;[KA]{I|L}[HD]KTV;{[TV]|[{I|L}S]}V[KQ]HTV;[KA]{I|L}S{[YC]|[HE]}KV;{[TV]|[{I|L}S]}[KA][VG]HTV;[KA]{I|L}[HD]TKV;[HT]V[VG]AKTV;{[TV]|[{I|L}S]}H[VG]AKTV;[HT]AA{I|L}AKTV 7.336;6.3942;4.4593;3.8019;3.4596;3.2389;3.1425;2.7103;2.6459;2.5169 +;+;-;-;-;-;-;-;-;- + 980 + 1 2.22 84858.2 0.9800000190734864 327 4045 4373 SUDHL4_400M_050219_2,4374 SUDHL4_400M_050219_2,4374,KAISGVHTV True True KAISGVHTV 19.140912 456.267962634563 461046.09375 4373.0 ENSG00000180574|ENST00000538173|EIF2S3B;;ENSG00000130741|ENST00000253039|EIF2S3;;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 5.616004467010498 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4385 19.185 292.0 220040.0 25 0 31494.0 + -1 IQRLETMK 8 79 517.7862027476164 1033.5578525620326 2 517.7867919802666 MULTI CID FTMS 0 0 0 4384 165471.140625 0.8773476581120845 -1 0.0040626525878906 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.5659792798204337 6 KTT[{I|L}P][WP]K 8 -1 45.099 0.0 0.0 4.3635 0.0 0.0 63.99754733567279 0.0 63.99754733567279 0.0 29.61426266193144 0.0 0.0 0 1.424742501084005 0.0 1.3494850021680094 0.2742275032520141 KTT[{I|L}P][WP]K 4.3635 - 109 + 1 2.22 53364.5 1.0 328 4055 4384 SUDHL4_400M_050219_2,4385 SUDHL4_400M_050219_2,4385,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4390 19.213 736.0 124640.0 25 0 13964.0 + 42499 VTKPVGGNY 9 109 467.7536527202894 933.4927525073788 2 467.7534057497978 MULTI CID FTMS 0 0 0 4389 116787.390625 0.1362207342206765 -15 0.0765876770019531 1 Unmodified _VTKPVGGNY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;nc|ENSG00000184110|Q99613-2|EIF3C 32.30548876998284 0.1201446275138228 6 VTK 3 6 43.984 0.0 0.0 4.7118 0.0 0.0 0.0 602.2591775154325 602.2591775154325 23.8991593855502 0.0 0.0 0.0 0 0.3807196863200844 1.3979400086720375 0.0 0.0 + VTK 4.7118 + + 334 + 1 2.22 75511.2 1.0 329 4059 4389 SUDHL4_400M_050219_2,4390 SUDHL4_400M_050219_2,4390,VTKPVGGNY True True VTKPVGGNY 19.212552 467.753405749798 6700384.0 4389.0 nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 5.502978324890137 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4392 19.219 180.0 278750.0 25 0 24094.0 + 42518 VTLDSPVLY 9 73 503.77463271791976 1005.5347125026396 2 503.7744628787041 MULTI CID FTMS 0 0 0 4391 289396.03125 0.6537976493658447 3 -0.0264739990234375 1 Unmodified _VTLDSPVLY_ REV__ENSG00000139112|ENST00000266458|GABARAPL1;REV__ENSG00000170296|ENST00000302386|GABARAP;REV__nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 26.88365393820708 0.1891292719743517 6 VT{I|L}DTTQ[KT] 9 -1 + 77.317 0.0 0.0 7.6892 7.6892 92.508 0.0 0.0 0.0 70.32760017977509 10.642492736872596 10.642492736872596 9.208187539523747 0 0.4247425010840047 2.0 0.9247425010840048 0.0 VT{I|L}DTTQ[KT];VT{I|L}DTT[AG][KT];VT{I|L}[WM]Q[KT];VT{I|L}[WM][AG][KT] 7.6892;6.7734;6.2534;5.3323 -;-;-;- 113 + 1 2.22 44801.0 1.0 330 4060 4391 SUDHL4_400M_050219_2,4392 SUDHL4_400M_050219_2,4392,VTLDSPVLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4395 19.239 800.0 38821.0 25 0 6783.0 -1 0 30 932.6324287422764 3726.5006091027058 4 933.1339599490166 MULTI CID FTMS 0 0 0 4394 46355.640625 0.0891259021757965 -13 0.069528579711914 1 6 G 1 -1 6.9897 0.0 0.0 0.18757 0.0 0.0 2147.751526772081 1518.6977711216011 3666.4492978936814 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.18757 - 1 + 1 2.22 37051.5 0.3100000023841858 331 4062 4394 SUDHL4_400M_050219_2,4395 SUDHL4_400M_050219_2,4395, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4398 19.26 800.0 39977.0 25 0 13309.0 -1 0 27 1094.109310237502 3279.306101312706 3 1094.444384753704 MULTI CID FTMS 0 0 0 4397 68495.8984375 0.1785102597830009 -14 0.086090087890625 1 6 G 1 -1 6.9897 0.0 0.0 0.21315 0.0 0.0 1856.647972505868 1362.5955294244752 3219.2435019303434 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21315 - 4 + 1 2.22 39538.2 0.3300000131130218 332 4064 4397 SUDHL4_400M_050219_2,4398 SUDHL4_400M_050219_2,4398, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4399 19.273 800.0 63049.0 25 0 18936.0 -1 0 29 1198.802058873392 3593.384347220376 3 1199.469042956829 MULTI CID FTMS 0 0 0 4397 84816.0234375 0.3085947515375373 -16 0.0940418243408203 2 6 E 1 -1 6.9897 0.0 0.0 0.19452 0.0 0.0 2937.156721396089 524.1605318658811 3461.31725326197 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19452 - 16 + 1 2.22 51295.1 0.2899999916553497 333 4064 4397 SUDHL4_400M_050219_2,4399 SUDHL4_400M_050219_2,4399, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4401 19.279 88.0 621660.0 25 0 79388.0 + 17689 KPTGARPSAL 10 67 499.29317817118175 996.5718034091636 2 499.2929870486259 MULTI CID FTMS 0 0 0 4400 633672.9375 0.5426451032312505 9 -0.0483684539794921 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 15.248480904072842 0.5916873121453583 6 KPT 3 7 39.253 0.0 0.0 3.9388 0.0 0.0 0.0 667.3526506955843 667.3526506955843 18.70674301237948 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + KPT 3.9388 + + 48 + 1 2.22 49802.1 1.0 334 4065 4400 SUDHL4_400M_050219_2,4401 SUDHL4_400M_050219_2,4401,KPTGARPSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4402 19.281 93.0 597680.0 25 0 49381.0 + 12136 GQKPGGSDF 9 87 446.7117864325284 891.4090199318568 2 446.7114745974541 MULTI CID FTMS 0 0 0 4400 639804.8125 0.1269672910864988 -18 0.1283798217773437 2 Unmodified _GQKPGGSDF_ ENSG00000128989|ENST00000249822|ARPP19;ENSG00000143420|ENST00000369014|ENSA;nc|ENSG00000128989|P56211-2|ARPP19;nc|ENSG00000143420|O43768-2|ENSA;nc|ENSG00000143420|O43768-3|ENSA;nc|ENSG00000143420|O43768-4|ENSA;nc|ENSG00000143420|O43768-5|ENSA;nc|ENSG00000143420|O43768-6|ENSA;nc|ENSG00000143420|O43768-7|ENSA;nc|ENSG00000143420|O43768-8|ENSA;nc|ENSG00000143420|O43768-9|ENSA 24.020572477871973 0.2255576514309169 6 D{M(Oxidation (M))|F} 2 7 25.261 0.0 0.0 2.8338 0.0 0.0 611.3043579218944 0.0 611.3043579218944 0.0 8.706290716515923 0.0 0.0 0 0.4247425010840047 0.0 0.3054621874040891 0.0 + D{M(Oxidation (M))|F} 2.8338 + + 82 + 1 2.22 48397.8 1.0 335 4065 4400 SUDHL4_400M_050219_2,4402 SUDHL4_400M_050219_2,4402,GQKPGGSDF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4408 19.305 268.0 201110.0 25 0 21482.0 17727 KPVGFTVHAI 10 57 534.8118095620911 1067.609066190982 2 534.8115722537041 MULTI CID FTMS 0 0 0 4407 261441.96875 0.6066115321363389 20 -0.2503776550292969 1 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 14.838274106304384 0.5985701837916485 6 KPTQ 4 7 44.993 0.0 0.0 4.2144 0.0 0.0 0.0 610.3320406549436 610.3320406549436 33.39902832107995 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 KPTQ 4.2144 - 20 + 1 2.22 47023.4 1.0 336 4070 4407 SUDHL4_400M_050219_2,4408 SUDHL4_400M_050219_2,4408,KPVGFTVHAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4411 19.318 356.0 249410.0 25 0 116570.0 -1 0 64 488.2678420812519 487.2605656146519 1 488.2679015994072 MULTI CID FTMS 0 0 0 4410 280593.28125 0.8567153370334644 -10 0.0862483978271484 1 6 V 1 -1 9.3323 0.0 0.0 1.9153 0.0 0.0 370.1817062169941 0.0 370.1817062169941 0.0 6.233361666706943 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.9153 - 15 + 1 2.22 76433.3 1.0 337 4072 4410 SUDHL4_400M_050219_2,4411 SUDHL4_400M_050219_2,4411, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4414 19.333 480.0 182530.0 25 0 10894.0 + 30349 RAFPNKQGY 9 99 540.7830949140231 1079.551636894846 2 540.7830688357353 MULTI CID FTMS 0 0 0 4413 154146.328125 0.4726037004578505 -55 0.4451274871826172 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 78.14939416004806 0.0179651292570206 6 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY 9 0 + 62.168 0.0 0.0 5.7587 5.7587 87.437 0.0 0.0 0.0 4.762036441594191 45.178571281644444 4.762036441594191 9.208187539523747 0 1.350576203518622 0.0 0.0 1.1549471895720984 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]K[AG]GY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]VRQGY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]V[VG]QGY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]VR[AG]GY;{[CT]|[{M(Oxidation (M))|F}G]}[RK][QP]QGY 5.7587;4.9057;4.4188;3.5658;3.5658;3.0176 +;-;-;-;-;- + 192 1 2.22 73232.0 1.0 338 4074 4413 SUDHL4_400M_050219_2,4414 SUDHL4_400M_050219_2,4414,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4417 19.343 122.0 335790.0 25 0 25481.0 -1 ESATITCLV 9 65 497.2496950873901 992.4848372415802 2 497.2497436404228 MULTI CID FTMS 0 0 0 4416 467208.8125 0.5990157998335173 -9 0.0517387390136718 1 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 57.47134341890925 0.0274820932774257 6 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 38.31 0.0 0.0 3.8601 3.8601 85.365 0.0 0.0 0.0 22.9583478775772 4.907585181787091 4.907585181787091 26.638115730523143 0 0.805462187404089 0.0 0.7614393726401688 0.0 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K;[KT]T[{I|L}P]TA{[{M(Oxidation (M))|F}D]|MM};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG][{I|L}P]T{M(Oxidation (M))|F}K 3.8601;1.1761;1.0262 -;-;- 113 + 1 2.22 37674.3 1.0 339 4076 4416 SUDHL4_400M_050219_2,4417 SUDHL4_400M_050219_2,4417,ESATITCLV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 4418 19.346 149.0 287740.0 25 0 24043.0 + 30124 QVKFYASY 8 80 503.2546716116781 1004.4947902901562 2 503.2539855837822 MULTI CID FTMS 0 0 0 4416 170700.890625 0.7758723618218929 -3 0.0189990997314453 2 Unmodified _QVKFYASY_ REV__ENST00000397863.5_1_18:74727156-74727399:-|nuORF 12.531546534597751 0.7257836412119636 6 T{I|L}D 3 -1 16.198 0.0 0.0 1.6125 0.0 0.0 98.02965464738118 574.2837008111936 672.3133554585748 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L}D 1.6125 - 21 + 1 2.22 37570.9 1.0 340 4076 4416 SUDHL4_400M_050219_2,4418 SUDHL4_400M_050219_2,4418,QVKFYASY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4422 19.368 661.0 150110.0 25 0 34516.0 + 39299 VADPETRTV 9 95 494.2590050743504 986.5034572155008 2 494.2592956423759 MULTI CID FTMS 0 0 0 4421 135728.703125 0.5517927789558643 -6 0.0363140106201171 1 Unmodified _VADPETRTV_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 24.99096001346401 0.2132109383330889 6 VADPE 5 4 69.949 0.0 0.0 7.0905 0.0 0.0 0.0 472.2551943098357 472.2551943098357 59.94850021680094 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + VADPE 7.0905 + + 222 + 1 2.22 79341.8 1.0 341 4079 4421 SUDHL4_400M_050219_2,4422 SUDHL4_400M_050219_2,4422,VADPETRTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4423 19.382 800.0 76100.0 25 0 5308.4 + 35001 SQPASGSAY 9 97 867.383209494278 866.375933027678 1 867.3835327029228 MULTI CID FTMS 0 0 0 4421 100797.921875 0.7937908261694281 1 -0.0278835296630859 2 Unmodified _SQPASGSAY_ ENSG00000161904|ENST00000293760|LEMD2 75.76082778847304 0.0188720312721366 6 {[QS]|[NT]}PSAGSAY 9 2 + 75.874 0.0 0.0 8.7576 8.7576 88.605 0.0 0.0 0.0 15.814243664528576 34.640012553530966 15.814243664528576 3.710149894766701 0 0.8807196863200843 0.0 2.2856668758921828 0.816901560044258 {[QS]|[NT]}PSAGSAY;{[QS]|[NT]}PSQSAY;{[QS]|[NT]}PTGGSAY;{[QS]|[NT]}PTNSAY;{[QS]|[NT]}PSATNY;{[QS]|[NT]}PTGTNY;{[QS]|[NT]}PSATGGY;{[QS]|[NT]}G[TP]GSAY;[NS][TP]AGSAY;{[QS]|[NT]}PTGTGGY 8.7576;8.3294;7.8807;7.4525;6.7241;5.8472;5.655;5.4589;5.0064;4.7781 -;-;-;-;-;-;-;-;-;- 1758 1 2.22 46477.5 0.3799999952316284 342 4079 4421 SUDHL4_400M_050219_2,4423 SUDHL4_400M_050219_2,4423,SQPASGSAY True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4426 19.398 539.0 129010.0 25 0 8687.3 + 30355 RAFPNKQGY 9 100 360.8579422004341 1079.5519972015024 3 360.8571960330009 MULTI CID FTMS 0 0 0 4425 119071.703125 0.8967303056707925 -13 0.0967636108398437 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 32.30548876998284 0.1201446275138228 6 PN 2 7 20.261 0.0 0.0 1.8768 0.0 0.0 374.2083550147177 491.2251070611938 865.4334620759115 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.3807196863200844 + PN 1.8768 + + 113 + 1 2.22 66179.4 1.0 343 4081 4425 SUDHL4_400M_050219_2,4426 SUDHL4_400M_050219_2,4426,RAFPNKQGY True True RAFPNKQGY 19.397949 360.857196033001 105792589.5 4425.0 nc|ENSG00000154473|O43684-2|BUB3;;ENSG00000154473|ENST00000368865|BUB3 8.150612513224283 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4427 19.41 686.0 109620.0 25 0 14142.0 + 45188 YQSDPSGNY 9 102 515.7092735658225 1029.403994198445 2 515.7095825076103 MULTI CID FTMS 0 0 0 4425 118617.0546875 1.0 0 0.0 2 Unmodified _YQSDPSGNY_ ENSG00000041357|ENST00000044462|PSMA4;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4 23.78978130925829 0.2284941198415988 6 [PS]GDH[PS]GNY 10 4 [PS]GDH[PS]G + + 22.321 9.8356 1.3395 2.1683 2.1683 50.476 0.0 0.0 0.0 0.0 10.58485698296213 0.0 0.0 0 0.5 0.0 0.0 0.3252574989159953 [PS]GDH[PS]GNY 2.1683 - 231 + 1 2.22 64783.8 1.0 344 4081 4425 SUDHL4_400M_050219_2,4427 SUDHL4_400M_050219_2,4427,YQSDPSGNY False True YQSDPSGNY 19.409884 515.70958250761 507885.75 4425.0 ENSG00000041357|ENST00000044462|PSMA4;;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;;nc|ENSG00000041357|P25789-2|PSMA4 7.650747934977214 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4429 19.425 696.0 127490.0 25 0 18213.0 + + 17476 KPEGTPQRI 9 93 513.2907038012028 1024.5668546692054 2 513.2906371951103 MULTI CID FTMS 0 0 0 4428 121271.203125 0.7875685970528369 -4 0.0596275329589843 1 Unmodified _KPEQPKWL_ ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 21.74664581756881 0.5868176546531598 6 KPE 3 -1 37.435 0.0 0.0 3.6537 0.0 0.0 0.0 667.3531588190061 667.3531588190061 9.780840948662613 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 KPE 3.6537 + + 131 + 1 2.22 72575.9 1.0 345 4082 4428 SUDHL4_400M_050219_2,4429 SUDHL4_400M_050219_2,4429,KPEQPKWL False False KPEGTPQRI 19.424544 513.29063719511 700667.5 4428.0 ENSG00000177853|ENST00000316045|ZNF518A;;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 2.7685148318608603 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4430 19.437 741.0 78144.0 25 0 5784.5 -1 LGIMNCSHPLA 11 88 614.7939051215832 1227.5732573099665 2 614.7941772341728 MULTI CID FTMS 0 0 0 4428 95639.546875 0.6988816967545423 -2 0.0278549194335937 2 Carbamidomethyl (C),Oxidation (M) _LGIM(Oxidation (M))NC(Carbamidomethyl (C))SHPLA_ ENSG00000188404|ENST00000236147|SELL;ENST00000463108.5_1_1:169670695-169680678:-|nuORF;nc|ENSG00000188404|P14151-2|SELL 13.90604991867851 0.7458848613461305 6 [PG]{I|L}DAD[NG]N[TA][{I|L}A] 13 -1 + 35.992 0.0 0.0 2.932 2.932 70.001 0.0 0.0 0.0 1.1394335230683694 11.162613361812564 1.1394335230683694 1.1394335230683694 0 0.4247425010840047 0.0 0.7059771852360797 0.7742275032520141 [PG]{I|L}DAD[NG]N[TA][{I|L}A];{[VA]|[{I|L}G]}PDAD[NG]N[TA][{I|L}A];[PG]D{I|L}AD[NG]N[TA][{I|L}A];[PG]{I|L}DAD[NG]{[SA]|[TG]}Q[{I|L}A];{[VA]|[{I|L}G]}PDAD[NG]{[SA]|[TG]}Q[{I|L}A];[PG]D{I|L}AD[NG]{[SA]|[TG]}Q[{I|L}A];[DP]G{I|L}AD[NG]N[TA][{I|L}A];[PG]{I|L}D[DV][WD]Q[{I|L}A];{[VA]|[{I|L}G]}PD[DV][WD]Q[{I|L}A];[PG]{I|L}D[KC]YY[RN] 2.932;2.8392;2.2981;2.2016;2.1088;1.5677;1.419;1.3671;1.2743;0.96911 -;-;-;-;-;-;-;-;-;- 1358 1 2.22 47354.3 1.0 346 4082 4428 SUDHL4_400M_050219_2,4430 SUDHL4_400M_050219_2,4430,LGIMNCSHPLA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4435 19.456 192.0 182410.0 25 0 22781.0 15838 ISKYPAANA 9 55 467.7536527202894 933.4927525073788 2 467.7531005740166 MULTI CID FTMS 0 0 0 4434 253101.390625 0.2952172925407523 12 -0.139261245727539 1 Unmodified _ISKYPAANA_ ENSG00000001460|ENST00000337248|STPG1;ENST00000497384.1_1_1:24696162-24710359:-|nuORF;nc|ENSG00000001460|Q5TH74-2|STPG1;nc|ENSG00000001460|Q5TH74-3|STPG1 21.74664581756881 0.2544899275067181 6 {[TV]|[{I|L}S]}KY 4 5 28.188 0.0 0.0 3.0196 0.0 0.0 0.0 439.1947725885376 439.1947725885376 12.703037561203844 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.0 0.0 + {[TV]|[{I|L}S]}KY 3.0196 + + 26 + 1 2.22 32526.8 1.0 347 4086 4434 SUDHL4_400M_050219_2,4435 SUDHL4_400M_050219_2,4435,ISKYPAANA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4436 19.469 800.0 8367.5 25 0 798.58 -1 0 20 977.4159859890062 2929.2261285672184 3 978.0844604372978 MULTI CID FTMS 0 0 0 4434 68166.03125 1.0 0 0.0 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 15706.0 0.3100000023841858 348 4086 4434 SUDHL4_400M_050219_2,4436 SUDHL4_400M_050219_2,4436, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4437 19.483 800.0 27031.0 25 0 2466.8 -1 0 31 875.0430935381944 0 874.8450195193291 PEAK CID FTMS 0 0 0 4434 16446.849609375 0.3317991748192848 3 -0.0805244445800781 3 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 24097.2 0.3100000023841858 349 4086 4434 SUDHL4_400M_050219_2,4437 SUDHL4_400M_050219_2,4437, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4439 19.5 800.0 55775.0 25 0 9922.0 -1 0 30 932.6324287422764 3726.5006091027058 4 932.8838989138604 MULTI CID FTMS 0 0 0 4438 134865.359375 0.2707973386926092 6 -0.0770950317382812 1 6 G 1 -1 6.9897 0.0 0.0 0.18757 0.0 0.0 2147.7501676277707 1518.7029334668232 3666.453101094594 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.18757 - 1 + 1 2.22 48261.0 0.5699999928474426 350 4087 4438 SUDHL4_400M_050219_2,4439 SUDHL4_400M_050219_2,4439, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4441 19.516 800.0 32994.0 25 0 9644.2 -1 0 24 1094.109310237502 3279.306101312706 3 1094.778857409954 MULTI CID FTMS 0 0 0 4440 92784.3046875 0.3224978860193785 7 -0.0744075775146484 1 6 G 1 -1 6.9897 0.0 0.0 0.21315 0.0 0.0 1856.662682109095 1362.6035271202795 3219.2662092293745 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21315 - 2 + 1 2.22 35011.6 0.3799999952316284 351 4088 4440 SUDHL4_400M_050219_2,4441 SUDHL4_400M_050219_2,4441, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4442 19.53 800.0 91885.0 25 0 4788.2 + 30911 RITENTSQY 9 95 556.2729800018093 1110.5314070704185 2 556.2734252810478 MULTI CID FTMS 0 0 0 4440 94718.515625 0.5652996365921915 -2 0.0502815246582031 2 Unmodified _RITENTSQY_ ENSG00000132603|ENST00000254940|NIP7;ENST00000565034.1_1_16:69373956-69375289:+|nuORF 40.23920728925047 0.0741434193262949 6 [AG]S[RK]NGMQY 10 7 + 59.938 0.0 0.0 5.3972 5.3972 78.62 0.0 0.0 0.0 1.912101459372991 6.704328361272971 1.912101459372991 1.912101459372991 0 0.8807196863200843 1.6989700043360187 0.7059771852360797 0.0 [AG]S[RK]NGMQY;[R{I|L}]TENTSQY;[AG]S[RK]NGM[AG]Y;[AG]S[RK]GGGMQY;[R{I|L}]TENTS[AG]Y;[R{I|L}]TEGGTSQY;{[QS]|[NT]}[RK]NGMQY;{[QD]|[EN]|[WG]|[KD]|[RS]}[KQ]NTSQY;[R{I|L}]TEGGTS[AG]Y;{[QS]|[NT]}[RK]GGGMQY 5.3972;5.225;4.572;4.572;4.3959;4.3959;4.3871;4.3498;3.5706;3.5579 -;+;-;-;-;-;-;-;-;- + 454 1 2.22 57915.1 0.4199999868869781 352 4088 4440 SUDHL4_400M_050219_2,4442 SUDHL4_400M_050219_2,4442,RITENTSQY True True RITENTSQY 19.52995 556.273425281048 575160.1875 4440.0 ENST00000565034.1_1_16:69373956-69375289:+|nuORF;;ENSG00000132603|ENST00000254940|NIP7 7.24843676884969 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4444 19.548 800.0 61823.0 25 0 16997.0 -1 0 30 1198.802058873392 3593.384347220376 3 1199.471118152142 MULTI CID FTMS 0 0 0 4443 115318.453125 0.4195748391343287 9 -0.0587368011474609 1 6 T 1 -1 5.4846 0.0 0.0 0.15263 0.0 0.0 2751.002158354945 738.3095186822874 3489.3116770372326 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.15263 - 9 + 1 2.22 49030.1 0.4199999868869781 353 4089 4443 SUDHL4_400M_050219_2,4444 SUDHL4_400M_050219_2,4444, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4446 19.552 16.0 2302700.0 25 0 229770.0 + 12137 GQKPGGSDF 9 64 446.7117864325284 891.4090199318568 2 446.7116271853447 MULTI CID FTMS 0 0 0 4445 3516145.0 0.6977681270838166 7 -0.0369415283203125 1 Unmodified _GQKPGGSDF_ ENSG00000128989|ENST00000249822|ARPP19;ENSG00000143420|ENST00000369014|ENSA;nc|ENSG00000128989|P56211-2|ARPP19;nc|ENSG00000143420|O43768-2|ENSA;nc|ENSG00000143420|O43768-3|ENSA;nc|ENSG00000143420|O43768-4|ENSA;nc|ENSG00000143420|O43768-5|ENSA;nc|ENSG00000143420|O43768-6|ENSA;nc|ENSG00000143420|O43768-7|ENSA;nc|ENSG00000143420|O43768-8|ENSA;nc|ENSG00000143420|O43768-9|ENSA 20.453626601364224 0.2830276176381075 6 D{M(Oxidation (M))|F} 2 7 24.776 0.0 0.0 2.7795 0.0 0.0 611.3030454477381 0.0 611.3030454477381 0.0 9.318722087674656 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + D{M(Oxidation (M))|F} 2.7795 + + 33 + 1 2.22 34978.4 1.0 354 4090 4445 SUDHL4_400M_050219_2,4446 SUDHL4_400M_050219_2,4446,GQKPGGSDF False True GQKPGGSDF 19.552466 446.711627185345 57222964.0 4445.0 nc|ENSG00000143420|O43768-7|ENSA;;nc|ENSG00000143420|O43768-4|ENSA;;ENSG00000143420|ENST00000369014|ENSA;;nc|ENSG00000128989|P56211-2|ARPP19;;nc|ENSG00000143420|O43768-3|ENSA;;nc|ENSG00000143420|O43768-9|ENSA;;ENSG00000128989|ENST00000249822|ARPP19;;nc|ENSG00000143420|O43768-5|ENSA;;nc|ENSG00000143420|O43768-2|ENSA;;nc|ENSG00000143420|O43768-6|ENSA;;nc|ENSG00000143420|O43768-8|ENSA 5.811785856882731 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4450 19.57 397.0 210110.0 25 0 111650.0 -1 0 53 488.2678420812519 487.2605656146519 1 488.2680236697197 MULTI CID FTMS 0 0 0 4449 178538.3125 0.5451182219525204 11 -0.0655059814453125 1 6 P[QP] 3 -1 2.9318 0.0 0.0 0.6017 0.0 0.0 147.08626249140815 0.0 147.08626249140815 0.0 2.9318250140072184 0.0 0.0 0 0.0 0.0 0.0 0.0 P[QP] 0.6017 - 10 + 1 2.22 69598.9 1.0 355 4093 4449 SUDHL4_400M_050219_2,4450 SUDHL4_400M_050219_2,4450, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4453 19.581 205.0 244060.0 25 0 15993.0 + 30350 RAFPNKQGY 9 69 540.7830949140231 1079.551636894846 2 540.7831298708916 MULTI CID FTMS 0 0 0 4452 253640.28125 0.7776463893886215 -34 0.35552978515625 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 48.345845343767074 0.0439967357579942 6 [HT]QK 4 8 36.598 0.0 0.0 3.3902 0.0 0.0 0.0 582.2801618299427 582.2801618299427 19.6087259199831 0.0 0.0 0.0 0 0.805462187404089 1.154901959985743 0.0 0.3807196863200844 [HT]QK 3.3902 - 116 + 1 2.22 44849.4 1.0 356 4095 4452 SUDHL4_400M_050219_2,4453 SUDHL4_400M_050219_2,4453,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4457 19.593 81.0 530920.0 25 0 40602.0 -1 ESATITCLV 9 78 497.2496950873901 992.4848372415802 2 497.2497741580009 MULTI CID FTMS 0 0 0 4456 649907.125 0.8332561926994403 13 -0.0969696044921875 1 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 57.47134341890925 0.0274820932774257 6 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 41.805 0.0 0.0 4.2122 4.2122 80.053 0.0 0.0 0.0 21.36001010907393 4.53234439706371 4.53234439706371 7.429475895135837 0 1.1549471895720984 0.0 0.7614393726401688 0.0 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}ATVV[TA]{[ES]|[DT]|[{I|L}C]};[TA]DTVV[TA]{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG][{I|L}P]T{M(Oxidation (M))|F}K;{[MG]|[TS]}{[CP]|[EA]}VV[TA]{[ES]|[DT]|[{I|L}C]} 4.2122;3.4636;3.3164;1.0262;0.8541 -;-;-;-;- 120 + 1 2.22 37352.8 1.0 357 4098 4456 SUDHL4_400M_050219_2,4457 SUDHL4_400M_050219_2,4457,ESATITCLV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 4462 19.622 800.0 112600.0 25 0 19391.0 + 39300 VADPETRTV 9 86 494.2590050743504 986.5034572155008 2 494.2582580447197 MULTI CID FTMS 0 0 0 4461 84176.5703125 0.3422122409357404 17 -0.1371574401855468 1 Unmodified _VADPETRTV_ ENSG00000039650|ENST00000322344|PNKP;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;ENST00000595792.1_1_19:50369586-50370764:-|nuORF;nc|ENSG00000039650|Q96T60-2|PNKP 24.99096001346401 0.2132109383330889 6 VADPE 5 4 66.573 0.0 0.0 6.7484 0.0 0.0 0.0 472.25303064517817 472.25303064517817 56.81897028431644 0.0 0.0 0.0 0 1.113982988912431 1.6989700043360187 0.3494850021680094 0.0 + VADPE 6.7484 + + 42 + 1 2.22 70843.1 0.4699999988079071 358 4102 4461 SUDHL4_400M_050219_2,4462 SUDHL4_400M_050219_2,4462,VADPETRTV False True VADPETRTV 19.622022 494.25825804472 2535308.0 4461.0 nc|ENSG00000039650|Q96T60-2|PNKP;;ENST00000593946.5_1_19:50364507-50370327:-|nuORF;;ENST00000594661.5_1_19:50367579-50369988:-|nuORF;;ENSG00000039650|ENST00000322344|PNKP;;ENST00000595792.1_1_19:50369586-50370764:-|nuORF 5.859707514444987 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4465 19.631 93.0 559810.0 25 0 78908.0 + 17646 KPTAAFHLL 9 63 499.293210522654 996.571868112108 2 499.2932311892509 MULTI CID FTMS 0 0 0 4464 487815.0 0.7865321396245102 -1 0.0038928985595703 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 6 KPTQ 4 -1 41.938 0.0 0.0 4.2082 0.0 0.0 0.0 539.2956026666624 539.2956026666624 31.22486274231747 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTQ 4.2082 - 24 + 1 2.22 44552.1 1.0 359 4104 4464 SUDHL4_400M_050219_2,4465 SUDHL4_400M_050219_2,4465,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4466 19.636 301.0 220510.0 25 0 28242.0 + 42519 VTLDSPVLY 9 75 503.7745186546179 1005.5344843760358 2 503.7740966677666 MULTI CID FTMS 0 0 0 4464 146628.453125 0.6515535582950001 -1 0.0038928985595703 2 Unmodified _VTLDSPVLY_ REV__ENSG00000139112|ENST00000266458|GABARAPL1;REV__ENSG00000170296|ENST00000302386|GABARAP;REV__nc|ENSG00000139112|Q9H0R8-2|GABARAPL1 34.10243960390752 0.1078313939113124 6 VT{I|L}DTTQ[KT] 9 -1 + 76.648 0.0 0.0 7.6226 7.6226 92.399 0.0 0.0 0.0 64.86509570926009 5.642492736872597 5.642492736872597 9.208187539523747 0 0.4247425010840047 2.0 0.4247425010840047 0.5 VT{I|L}DTTQ[KT];VT{I|L}DTT[AG][KT];VT{I|L}[WM]Q[KT];VT{I|L}DTVVPY;VT{I|L}DT[YV][VP];VT{I|L}[WM][AG][KT];VT{I|L}[HQ][{M(Oxidation (M))|F}V]Y 7.6226;6.7068;6.2534;5.9557;5.3849;5.3323;4.8593 -;-;-;-;-;-;- 193 + 1 2.22 55914.1 1.0 360 4104 4464 SUDHL4_400M_050219_2,4466 SUDHL4_400M_050219_2,4466,VTLDSPVLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4473 19.672 734.0 139770.0 25 0 20430.0 + 30356 RAFPNKQGY 9 127 360.8574111152603 0 360.8575622439384 PEAK CID FTMS 0 0 0 4472 80495.6171875 0.5180834234145628 -21 0.1265811920166015 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 25.399314129420983 0.152124705672316 6 {M(Oxidation (M))|F} 1 8 5.4846 0.0 0.0 0.76206 0.0 0.0 345.4934867465088 224.11573206119377 569.6092188077025 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 0.76206 + + 31 + 1 2.22 92318.0 1.0 361 4110 4472 SUDHL4_400M_050219_2,4473 SUDHL4_400M_050219_2,4473,RAFPNKQGY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4474 19.686 800.0 38230.0 25 0 11119.0 -1 0 26 1179.4609867064523 3535.361130719557 3 1179.791674792767 MULTI CID FTMS 0 0 0 4472 72409.9453125 0.8163981783305615 1 -0.0291252136230468 2 6 G 1 -1 6.9897 0.0 0.0 0.19771 0.0 0.0 2147.7590321861576 1327.5601036856433 3475.319135871801 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19771 - 2 + 1 2.22 33820.1 0.2800000011920929 362 4110 4472 SUDHL4_400M_050219_2,4474 SUDHL4_400M_050219_2,4474, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4477 19.705 719.0 159380.0 25 0 49477.0 + 31816 RTAGPHTQF 9 95 507.7598598137196 1013.5051666942392 2 507.7592346072197 MULTI CID FTMS 0 0 0 4476 90325.8984375 0.8336568441943332 -1 0.004068374633789 1 Unmodified _RTAGPHTQF_ ENSG00000008838|ENST00000394128|MED24;ENST00000491466.5_1_17:38175784-38176226:-|nuORF;nc|ENSG00000008838|O75448-2|MED24 28.49450938151212 0.1686335738423394 6 [QT]RPHTQ{M(Oxidation (M))|F} 8 3 + 55.299 0.0 0.0 5.4562 5.4562 87.491 0.0 0.0 0.0 6.945830421822663 43.800532298722985 6.945830421822663 9.262137858390815 0 0.8209991640913001 0.0 0.8494850021680094 0.0 [QT]RPHTQ{M(Oxidation (M))|F};[QT]RPHT[AG]{M(Oxidation (M))|F};[{I|L}T]E[Y{I|L}]TQ{M(Oxidation (M))|F};[QT]RPHG[TA]{M(Oxidation (M))|F};[{I|L}T]E[Y{I|L}]T[AG]{M(Oxidation (M))|F};[{I|L}T]E[Y{I|L}]G[TA]{M(Oxidation (M))|F};[QT]R[YQ][YR] 5.4562;4.5423;3.4168;3.2082;2.5029;1.1688;0.24313 -;-;-;-;-;-;- 241 1 2.22 92492.4 1.0 363 4112 4476 SUDHL4_400M_050219_2,4477 SUDHL4_400M_050219_2,4477,RTAGPHTQF False True RTAGPHTQF 19.704734 507.75923460722 522901.78125 4476.0 nc|ENSG00000008838|O75448-2|MED24;;ENSG00000008838|ENST00000394128|MED24;;ENST00000491466.5_1_17:38175784-38176226:-|nuORF 6.27343225479126 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4478 19.719 800.0 116160.0 25 0 5099.4 + 32170 RVSNVKSVY 9 111 526.298891252301 1050.583229571402 2 526.2989990115166 MULTI CID FTMS 0 0 0 4476 94504.3046875 0.6093260212168375 -5 0.045389175415039 2 Unmodified _RVSNVKSVY_ ENSG00000104738|ENST00000649973|MCM4 30.7034409873982 0.1405282614900322 6 [VS][RN]VKSVY 9 2 + 68.591 0.0 0.0 6.5289 6.5289 82.095 0.0 0.0 0.0 21.60856500487897 44.31525716318134 21.60856500487897 1.9188552623891293 0 0.8807196863200843 1.6989700043360187 0.6307196863200843 0.6643943297944485 [VS][RN]VKSVY;[VS]G{[NV]|[RG]}VKSVY;[VS]V[RN]KSVY;[VS]GKR[VG]SVY;[VS]GK[VG]RSVY;{[QD]|[EN]|[WG]|[KD]|[RS]}{[NV]|[RG]}VKSVY;{[QD]|[EN]|[WG]|[KD]|[RS]}K[PS]KSVY;{[QD]|[EN]|[WG]|[KD]|[RS]}KR[VG]SVY;{[QD]|[EN]|[WG]|[KD]|[RS]}K[VG]RSVY;{[QD]|[EN]|[WG]|[KD]|[RS]}KRRWY 6.5289;6.3462;6.0747;5.3774;5.3774;4.2694;3.8152;3.3006;3.3006;2.9068 -;-;-;-;-;-;-;-;-;- 403 1 2.22 77414.4 0.4300000071525574 364 4112 4476 SUDHL4_400M_050219_2,4478 SUDHL4_400M_050219_2,4478,RVSNVKSVY False True RVSNVKSVY 19.718565 526.298999011517 507243.65625 4476.0 ENSG00000104738|ENST00000649973|MCM4 6.092043876647949 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4486 19.759 800.0 72492.0 25 0 12932.0 + 44450 YMMKKSNYFR 10 72 684.3308746164681 1366.6471962997362 2 684.3308593630791 MULTI CID FTMS 0 0 0 4485 78482.703125 0.8985322914573125 1 -0.0163764953613281 1 Unmodified _YMMKKSNYFR_ REV__ENST00000406606.7_3_9:136627407-136627686:-|nuORF 5.731851221503515 0.7001233259664787 6 ENAWD 5 -1 56.375 0.0 0.0 4.1251 0.0 0.0 239.12721450019689 509.2860112581852 748.4132257583822 0.0 0.0 0.0 0.0 0 2.9247425010840047 0.0 0.5 1.1237125054200234 ENAWD 4.1251 - 239 1 2.22 48156.3 0.3899999856948852 365 4119 4485 SUDHL4_400M_050219_2,4486 SUDHL4_400M_050219_2,4486,YMMKKSNYFR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4488 19.777 800.0 24224.0 25 0 8414.8 -1 0 22 1094.109310237502 3279.306101312706 3 1094.445239245892 MULTI CID FTMS 0 0 0 4487 83963.5859375 0.2188212999599061 42 -0.328409194946289 1 6 QY 2 -1 6.1979 0.0 0.0 0.189 0.0 0.0 2623.0764393027434 362.1095761031203 2985.186015405864 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QY 0.189 - 4 + 1 2.22 29333.8 0.3199999928474426 366 4120 4487 SUDHL4_400M_050219_2,4488 SUDHL4_400M_050219_2,4488, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4492 19.801 800.0 15324.0 25 0 5163.3 -1 0 20 1096.690037866586 4382.731045599944 4 1097.192675769329 MULTI CID FTMS 0 0 0 4491 31324.73046875 0.2766121249404029 -10 0.0662612915039062 1 6 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.12514 0.0 0.0 2860.0558269493567 1372.6438692682252 4232.699696217582 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.12514 - 1 + 1 2.22 24801.0 0.2899999916553497 367 4123 4491 SUDHL4_400M_050219_2,4492 SUDHL4_400M_050219_2,4492, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4496 19.826 800.0 41642.0 25 0 13259.0 -1 0 29 1196.4740525833888 3586.400328350366 3 1196.806933581829 MULTI CID FTMS 0 0 0 4495 97821.2578125 0.7748435646123001 -10 0.078775405883789 1 6 G 1 -1 6.9897 0.0 0.0 0.19489 0.0 0.0 2163.7505963297804 1362.5933321588502 3526.343928488631 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19489 - 9 + 1 2.22 38988.5 0.2800000011920929 368 4126 4495 SUDHL4_400M_050219_2,4496 SUDHL4_400M_050219_2,4496, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4499 19.836 201.0 266950.0 25 0 15424.0 + 30351 RAFPNKQGY 9 86 540.7830949140231 1079.551636894846 2 540.7830688357353 MULTI CID FTMS 0 0 0 4498 264180.5 0.8099620886691503 -1 0.0040607452392578 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 61.357469665136826 0.0253304979873734 6 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY 9 0 + 62.864 0.0 0.0 5.8232 5.8232 87.69 0.0 0.0 0.0 4.137342758552691 55.87456204152056 4.137342758552691 9.208187539523747 0 1.620371515030528 0.0 0.0 1.079689690656103 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]K[AG]GY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]VRQGY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]V[VG]QGY;{[QV]|[N{I|L}]|[RA]|[KV]}[KC]VR[AG]GY 5.8232;4.9702;4.2613;3.4083;3.4083 +;-;-;-;- + 128 1 2.22 47698.7 1.0 369 4128 4498 SUDHL4_400M_050219_2,4499 SUDHL4_400M_050219_2,4499,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4502 19.853 589.0 123200.0 25 0 12056.0 -1 ESATITCLV 9 100 497.2496950873901 992.4848372415802 2 497.2494079470634 MULTI CID FTMS 0 0 0 4501 104273.5 0.1336907017436454 45 -0.3600540161132812 1 Carbamidomethyl (C) _ESATITC(Carbamidomethyl (C))LV_ nc|ENSG00000211899|P01871-1|IGHM;nc|ENSG00000211899|P01871|IGHM 67.34385681178166 0.0221257235307089 6 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K 9 -1 + 47.127 0.0 0.0 4.7484 4.7484 74.621 0.0 0.0 0.0 5.642492736872597 0.9017663034908808 0.9017663034908808 0.9017663034908808 0 1.1861818737241734 0.0 1.2302046884880935 0.0 {[ES]|[DT]|[{I|L}C]}AT[{I|L}P]T{M(Oxidation (M))|F}K;{[ES]|[DT]|[{I|L}C]}AT[{I|L}P]TK{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG][{I|L}P]T{M(Oxidation (M))|F}K;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PG][{I|L}P]TK{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[RH]T{M(Oxidation (M))|F}K;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[RH]TK{M(Oxidation (M))|F};[KT]T{I|L}P{M(Oxidation (M))|F}A{[ES]|[DT]|[{I|L}C]};[KT]T{I|L}PTAD{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{M(Oxidation (M))|F}P{I|L}[PS]K 4.7484;4.6575;1.7983;1.7074;1.3577;1.2668;0.68845;0.6042;0.57364 -;-;-;-;-;-;-;-;- 218 + 1 2.22 59705.2 1.0 370 4130 4501 SUDHL4_400M_050219_2,4502 SUDHL4_400M_050219_2,4502,ESATITCLV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 4503 19.867 800.0 116650.0 25 0 12107.0 17728 KPVGFTVHAI 10 95 534.811873919923 1067.6091949066458 2 534.8118163943291 MULTI CID FTMS 0 0 0 4501 100489.5078125 0.3483280511783729 -13 0.1056385040283203 2 Unmodified _KPVGFTVHAI_ ENSG00000142609|ENST00000682832|CFAP74;nc|ENSG00000142609|Q9C0B2|CFAP74 20.453626601364224 0.5043500229302764 6 KPTQP 5 7 48.36 0.0 0.0 4.5297 0.0 0.0 0.0 513.2687471979124 513.2687471979124 33.667053245199625 0.0 0.0 0.0 0 1.2302046884880935 0.0 0.3494850021680094 0.0 KPTQP 4.5297 - 81 + 1 2.22 77619.8 0.4600000083446502 371 4130 4501 SUDHL4_400M_050219_2,4503 SUDHL4_400M_050219_2,4503,KPVGFTVHAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4506 19.876 123.0 497550.0 25 0 132230.0 + 12888 GVYGGSVHEA 10 64 488.2308050728709 974.4470572125418 2 488.2308532595634 MULTI CID FTMS 0 0 0 4505 340771.53125 0.7529875572939403 -3 0.0346317291259765 1 Unmodified _GVYGGSVHEA_ ENSG00000133313|ENST00000324262|CNDP2;ENST00000583938.5_1_18:72178083-72181050:+|nuORF;nc|ENSG00000133313|Q96KP4-2|CNDP2 13.90604991867851 0.6142120002215601 6 [VG]YG{M(Oxidation (M))|F} 5 6 38.812 0.0 0.0 3.983 0.0 0.0 0.0 448.2166231744751 448.2166231744751 19.771212547196622 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 [VG]YG{M(Oxidation (M))|F} 3.983 - 39 + 1 2.22 54569.9 1.0 372 4132 4505 SUDHL4_400M_050219_2,4506 SUDHL4_400M_050219_2,4506,GVYGGSVHEA False True GVYGGSVHEA 19.875981 488.230853259563 1692871.5 4505.0 ENSG00000133313|ENST00000324262|CNDP2;;ENST00000583938.5_1_18:72178083-72181050:+|nuORF;;nc|ENSG00000133313|Q96KP4-2|CNDP2 2.8316897551218667 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4507 19.89 800.0 88047.0 25 0 26490.0 + 18942 LDALTSYALP 10 81 532.2862577599494 1062.5579625866987 2 532.2962524294853 MULTI CID FTMS 0 0 0 4505 92561.875 0.1578391598509033 -64 0.5817241668701172 2 Unmodified _LDALTSYALP_ REV__ENSG00000196367|ENST00000456197|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5|TRRAP 6.723162845929126 0.6955379296933136 6 Y 1 -1 13.979 0.0 0.0 1.3156 0.0 0.0 881.4838791900175 0.0 881.4838791900175 0.0 -1.593793813122062 -1.593793813122062 0.0 0 0.0 0.0 0.0 0.0 Y 1.3156 + + 22 + 1 2.22 54367.6 0.4399999976158142 373 4132 4505 SUDHL4_400M_050219_2,4507 SUDHL4_400M_050219_2,4507,LDALTSYALP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4510 19.91 800.0 157790.0 25 0 25480.0 -1 QPHYRLCL 8 120 543.7806280103604 1085.5467030875209 2 543.7803222537041 MULTI CID FTMS 0 0 0 4509 173086.203125 0.1310552210663642 -28 0.2536220550537109 1 Carbamidomethyl (C) _QPHYRLC(Carbamidomethyl (C))L_ ENSG00000166037|ENST00000325542|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 38.15118350030904 0.2652218139009398 6 [AG]PQDT[WK]A 9 -1 44.548 0.0 0.0 4.1037 0.0 0.0 0.0 128.0718172662719 128.0718172662719 17.76515853243602 0.0 0.0 0.0 0 0.75 1.3979400086720375 0.3252574989159953 0.3494850021680094 [AG]PQDT[WK]A 4.1037 - 739 + 1 2.22 97819.9 0.5699999928474426 374 4134 4509 SUDHL4_400M_050219_2,4510 SUDHL4_400M_050219_2,4510,QPHYRLCL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4513 19.928 622.0 95495.0 25 0 8500.7 + 28846 QAGPATGQAY 10 102 482.2302455508013 962.4459381684028 2 482.2299682497978 MULTI CID FTMS 0 0 0 4512 96920.0234375 0.6773673940360609 -2 0.0202598571777343 1 Unmodified _QAGPATGQAY_ ENSG00000167615|ENST00000326764|LENG8;nc|ENSG00000167615|Q96PV6-1|LENG8 47.74868867922204 0.0933642699623533 6 {[QG]|[NA]}PAATGQAY 10 2 + 32.043 0.0 0.0 3.3293 3.3293 73.982 0.0 0.0 0.0 3.34044585199166 8.895520021896104 3.34044585199166 3.3322751996265367 0 0.8935078169319297 0.0 1.174742501084005 0.4247425010840047 {[QG]|[NA]}PAATGQAY;{[QG]|[NA]}TAPAGQAY;[PG]QAATGQAY;[QA]SAPAGQAY;[QA][QP]TGQAY;[NP]AAATGQAY;{[QG]|[NA]}TAPQQAY;[QA]SAPQQAY;{[QG]|[NA]}P[TA]AGQAY;[NP]{[NV]|[RG]}TGQAY 3.3293;2.9831;2.947;2.8605;2.8408;2.8336;2.6927;2.5701;2.5221;2.4677 -;-;-;-;-;-;-;-;-;- 572 1 2.22 50522.9 1.0 375 4136 4512 SUDHL4_400M_050219_2,4513 SUDHL4_400M_050219_2,4513,QAGPATGQAY True True QAGPATGQAY 19.927535 482.229968249798 721973.625 4512.0 ENSG00000167615|ENST00000326764|LENG8;;nc|ENSG00000167615|Q96PV6-1|LENG8 4.985689004262288 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4514 19.941 800.0 98770.0 25 0 29067.0 -1 0 41 1191.1413664957363 3570.4022700874093 3 1191.475634753704 MULTI CID FTMS 0 0 0 4512 178692.9375 0.0481572747510753 -28 0.2657527923583984 2 6 E 1 -1 6.9897 0.0 0.0 0.19577 0.0 0.0 2914.174946568377 524.1637667291624 3438.3387132975395 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19577 - 43 + 1 2.22 73732.2 0.4600000083446502 376 4136 4512 SUDHL4_400M_050219_2,4514 SUDHL4_400M_050219_2,4514, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4531 20.02 800.0 128100.0 25 0 21511.0 + -1 LTGWPLTMK 9 101 531.7843247213077 0 531.7843505740166 PEAK CID FTMS 0 0 0 4530 47841.5234375 0.0476226289997171 -42 0.3453216552734375 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 34.40172386719151 0.0892392376003579 6 KTTH{[TV]|[{I|L}S]}TT 8 -1 42.362 0.0 0.0 3.9905 0.0 0.0 63.99838977532347 125.07229028873282 189.0706800640563 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 1.548455006504028 0.0 KTTH{[TV]|[{I|L}S]}TT 3.9905 - 388 + 1 2.22 84632.0 0.4399999976158142 377 4152 4530 SUDHL4_400M_050219_2,4531 SUDHL4_400M_050219_2,4531,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4536 20.043 479.0 217470.0 25 0 85058.0 38969 TVPPAIRSY 9 84 502.28288196111214 0 502.2821838259697 PEAK CID FTMS 0 0 0 4535 133894.71875 0.829123291575914 23 -0.184915542602539 1 Unmodified _TVPPAIRSY_ ENSG00000073578|ENST00000264932|SDHA;ENST00000503674.5_1_5:250762-256532:+|nuORF;ENST00000507522.1_1_5:253163-256532:+|nuORF;ENST00000515752.5_1_5:236500-256532:+|nuORF;nc|ENSG00000073578|P31040-2|SDHA;nc|ENSG00000073578|P31040-3|SDHA 7.910154910731844 0.3362437653303669 6 K 1 9 3.4949 0.0 0.0 0.3486 0.0 0.0 328.15437368609304 543.2775362604124 871.4319099465054 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.3486 - 5 + 1 2.22 86136.1 1.0 378 4156 4535 SUDHL4_400M_050219_2,4536 SUDHL4_400M_050219_2,4536,TVPPAIRSY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4539 20.063 800.0 17524.0 25 0 3123.5 -1 0 23 903.3431873893002 1804.6718218454 2 903.3430663943292 MULTI CID FTMS 0 0 0 4538 59729.95703125 0.9021212745511716 1 -0.0163841247558593 1 6 V 1 -1 5.4846 0.0 0.0 0.30391 0.0 0.0 471.0981656948128 1231.4956759088502 1702.593841603663 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.30391 - 3 + 1 2.22 22648.3 0.3000000119209289 379 4158 4538 SUDHL4_400M_050219_2,4539 SUDHL4_400M_050219_2,4539, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4542 20.084 800.0 41755.0 25 0 10391.0 -1 0 30 1198.467249115413 3592.3799179464404 3 1199.137011706829 MULTI CID FTMS 0 0 0 4541 73547.375 0.2913062418513558 -7 0.047576904296875 1 6 N 1 -1 5.4846 0.0 0.0 0.15267 0.0 0.0 2258.759264725541 1216.5472916892538 3475.3065564147946 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.15267 - 1 + 1 2.22 35897.4 0.3499999940395355 380 4160 4541 SUDHL4_400M_050219_2,4542 SUDHL4_400M_050219_2,4542, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4545 20.095 259.0 285070.0 25 0 55015.0 + 30352 RAFPNKQGY 9 78 540.7830949140231 1079.551636894846 2 540.7833740115166 MULTI CID FTMS 0 0 0 4544 174448.859375 0.534850083580453 33 -0.2066535949707031 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 52.268347100219714 0.0353964759249114 6 KQGY 4 5 52.18 0.0 0.0 4.8335 0.0 0.0 585.3010703370372 0.0 585.3010703370372 0.0 38.20107520596089 0.0 0.0 0 1.4005149978319906 0.0 0.0 0.7742275032520141 + KQGY 4.8335 + + 99 1 2.22 60788.0 1.0 381 4162 4544 SUDHL4_400M_050219_2,4545 SUDHL4_400M_050219_2,4545,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4546 20.109 800.0 116050.0 25 0 26553.0 + 37211 TIIDKSKSV 9 94 495.795236357721 989.575919782242 2 495.7952453494072 MULTI CID FTMS 0 0 0 4544 100171.359375 0.1311668586883524 -18 0.1179351806640625 2 Unmodified _TIIDKSKSV_ ENSG00000112972|ENST00000325110|HMGCS1;ENST00000507004.1_1_5:43298575-43313480:-|nuORF;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 38.61474834105838 0.0830609365873449 6 T{I|L}{I|L}DKSKSV 9 0 + 89.677 0.0 0.0 9.0622 9.0622 84.239 0.0 0.0 0.0 42.48013344840447 10.616742845273066 10.616742845273066 0.5237875363565792 0 0.6549471895720985 2.0 0.6747425010840047 0.3807196863200844 + + T{I|L}{I|L}DKSKSV;T{I|L}VEKSKSV;V[{I|L}T]EKSKSV 9.0622;9.0093;3.8502 +;-;- + 568 + 1 2.22 78357.1 0.449999988079071 382 4162 4544 SUDHL4_400M_050219_2,4546 SUDHL4_400M_050219_2,4546,TIIDKSKSV True True TIIDKSKSV 20.108788 495.795245349407 6146563.5 4544.0 ENST00000507004.1_1_5:43298575-43313480:-|nuORF;;ENSG00000112972|ENST00000325110|HMGCS1;;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 4.758258819580078 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4549 20.129 800.0 27073.0 25 0 6487.2 -1 0 23 893.606946394798 3570.398679712792 4 894.1097289919853 MULTI CID FTMS 0 0 0 4548 46816.0 0.5531695900213894 1 -0.0218544006347656 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 2.22 33205.1 0.3499999940395355 383 4164 4548 SUDHL4_400M_050219_2,4549 SUDHL4_400M_050219_2,4549, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4550 20.135 299.0 176780.0 25 0 32783.0 -1 0 74 416.211932709954 415.204656243354 1 416.2123290896416 MULTI CID FTMS 0 0 0 4548 135226.984375 0.5715399421930543 28 -0.1568889617919922 2 6 M 1 -1 11.783 0.0 0.0 2.8378 0.0 0.0 266.15352206542275 0.0 266.15352206542275 0.0 7.178642847807186 0.0 0.0 0 0.0 0.0 0.0 0.0 M 2.8378 - 5 + 1 2.22 47616.3 1.0 384 4164 4548 SUDHL4_400M_050219_2,4550 SUDHL4_400M_050219_2,4550, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4553 20.147 343.0 198160.0 25 0 28578.0 3158 AVSKSIHTC 9 74 473.2437301368155 944.472907340431 2 473.2435790896416 MULTI CID FTMS 0 0 0 4552 81214.40625 0.5393121814393848 -8 0.0919094085693359 1 Unmodified _AVSKSIHTC_ ENST00000475432.6_1_19:46800333-46815736:+|nuORF;nc|ENSG00000124440|Q9Y2N7-4|HIF3A 15.847184025352805 0.4077185912009129 6 {[VA]|[{I|L}G]}PYD 5 7 40.075 0.0 0.0 4.2431 0.0 0.0 0.0 396.2005404108032 396.2005404108032 33.0854562117252 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {[VA]|[{I|L}G]}PYD 4.2431 - 53 + 1 2.22 56559.2 1.0 385 4166 4552 SUDHL4_400M_050219_2,4553 SUDHL4_400M_050219_2,4553,AVSKSIHTC False False False False non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_2 4556 20.156 67.0 754650.0 25 0 126790.0 28252 PQSTQQERL 9 68 543.7806280103604 1085.5467030875209 2 543.7806274294853 MULTI CID FTMS 0 0 0 4555 869329.125 0.6582276264620901 6 -0.0449275970458984 1 Unmodified _PQSTQQERL_ ENST00000520584.5_1_8:144332832-144332988:+|nuORF 26.88365393820708 0.1891292719743517 6 [QP]QDT[WK]A{I|L} 9 6 [QP] + + 40.762 4.705 2.0901 3.755 3.755 53.403 0.0 0.0 0.0 0.0 20.316978991741976 0.0 0.0 0 0.75 0.0 0.3054621874040891 0.3252574989159953 [QP]QDT[WK]A{I|L} 3.755 - 74 + 1 2.22 44103.2 1.0 386 4168 4555 SUDHL4_400M_050219_2,4556 SUDHL4_400M_050219_2,4556,PQSTQQERL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4557 20.163 357.0 258870.0 25 0 137970.0 -1 0 66 488.2677575321264 487.2604810655264 1 488.2668945193291 MULTI CID FTMS 0 0 0 4555 190346.546875 0.4270230383641367 -64 0.5254802703857422 2 6 M 1 -1 10.837 0.0 0.0 2.2242 0.0 0.0 338.209560510642 0.0 338.209560510642 0.0 1.8030784282411272 0.0 0.0 0 0.0 0.0 0.0 0.0 M 2.2242 - 13 + 1 2.22 78766.3 1.0 387 4168 4555 SUDHL4_400M_050219_2,4557 SUDHL4_400M_050219_2,4557, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4561 20.187 800.0 108460.0 25 0 24113.0 + 17690 KPTGARPSAL 10 80 499.2936521980932 996.5727514629864 2 499.2926208376884 MULTI CID FTMS 0 0 0 4560 48449.78515625 0.122829752486335 -31 0.217498779296875 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 13.614867670302877 0.6190977555336379 6 KPTG 4 6 41.186 0.0 0.0 4.1327 0.0 0.0 0.0 610.3283785455686 610.3283785455686 30.34816983453236 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + KPTG 4.1327 + + 43 + 1 2.22 70768.1 0.4300000071525574 388 4171 4560 SUDHL4_400M_050219_2,4561 SUDHL4_400M_050219_2,4561,KPTGARPSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4563 20.192 66.0 1315800.0 25 0 377620.0 -1 0 40 1191.1413664957363 3570.4022700874093 3 1191.475878894329 MULTI CID FTMS 0 0 0 4562 2573923.75 0.6936656532218477 8 -0.0331230163574218 1 6 GYW 3 -1 11.682 0.0 0.0 0.3272 0.0 0.0 2147.752589715669 1013.4678438776 3161.220433593269 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GYW 0.3272 - 13 + 1 2.22 80897.3 1.0 389 4172 4562 SUDHL4_400M_050219_2,4563 SUDHL4_400M_050219_2,4563, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4581 20.262 60.0 891430.0 25 0 129940.0 + -1 LTGWPLTMK 9 77 531.7843247213077 0 531.7842895388603 PEAK CID FTMS 0 0 0 4580 941419.1875 0.9371118116273432 -5 0.0201492309570312 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 30.63653989081413 0.1077493867305487 6 KTT 3 -1 34.297 0.0 0.0 3.2308 0.0 0.0 63.99847522430077 664.3426074653634 728.3410826896642 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 1.2302046884880935 0.0 KTT 3.2308 - 83 + 1 2.22 43943.5 1.0 390 4189 4580 SUDHL4_400M_050219_2,4581 SUDHL4_400M_050219_2,4581,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4586 20.29 800.0 21134.0 25 0 12909.0 -1 0 21 989.899177617718 5933.351406906709 6 990.2349731326104 MULTI CID FTMS 0 0 0 4585 35758.6796875 0.476985710992644 1 -0.0163917541503906 1 6 SK 2 -1 10.969 0.0 0.0 0.18487 0.0 0.0 5060.850931908465 654.3518160455686 5715.202747954034 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SK 0.18487 - 3 + 1 2.22 22568.1 0.3100000023841858 391 4193 4585 SUDHL4_400M_050219_2,4586 SUDHL4_400M_050219_2,4586, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4589 20.304 419.0 112150.0 25 0 9307.1 33718 SKWSTFGTL 9 87 513.7652012490628 1025.5158495649257 2 513.7651855349541 MULTI CID FTMS 0 0 0 4588 105345.3515625 0.417394196018261 -20 0.0938758850097656 1 Unmodified _SKWSTFGTL_ ENSG00000176571|ENST00000518476|CNBD1 14.838274106304384 0.4350285940865338 6 [KS]P{[TV]|[{I|L}S]}TVSK 9 6 24.451 0.0 0.0 2.3842 0.0 0.0 0.0 94.95454278202274 94.95454278202274 4.457932731903668 0.0 0.0 0.0 0 0.0 0.0 0.0 1.113982988912431 [KS]P{[TV]|[{I|L}S]}TVSK 2.3842 - 150 1 2.22 45056.8 1.0 392 4195 4588 SUDHL4_400M_050219_2,4589 SUDHL4_400M_050219_2,4589,SKWSTFGTL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4590 20.318 800.0 74625.0 25 0 6727.2 + 12046 GQDPHSSQAF 10 100 537.2361512859103 1072.4577496386205 2 537.2361328005791 MULTI CID FTMS 0 0 0 4588 96283.71875 1.0 0 0.0 2 Unmodified _GQDPHSSQAF_ ENSG00000160949|ENST00000409379|TONSL;ENST00000497613.2_1_8:145658938-145666334:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL 35.61225514009592 0.2039006631696762 6 QCSQA{M(Oxidation (M))|F} 6 5 39.73 0.0 0.0 3.7046 0.0 0.0 390.1648731916032 0.0 390.1648731916032 0.0 20.29290666384 0.0 0.0 0 1.0 0.0 0.0 0.0 QCSQA{M(Oxidation (M))|F} 3.7046 - 300 1 2.22 52002.9 0.4600000083446502 393 4195 4588 SUDHL4_400M_050219_2,4590 SUDHL4_400M_050219_2,4590,GQDPHSSQAF False True GQDPHSSQAF 20.318116 537.236132800579 491572.1875 4588.0 ENSG00000160949|ENST00000409379|TONSL;;ENST00000497613.2_1_8:145658938-145666334:-|nuORF;;nc|ENSG00000160949|Q96HA7-2|TONSL 6.577654043833415 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4598 20.354 535.0 168800.0 25 0 37169.0 + 37212 TIIDKSKSV 9 110 495.795236357721 989.575919782242 2 495.7953063845634 MULTI CID FTMS 0 0 0 4597 183035.828125 0.2396716461908097 22 -0.1820583343505859 1 Unmodified _TIIDKSKSV_ ENSG00000112972|ENST00000325110|HMGCS1;ENST00000507004.1_1_5:43298575-43313480:-|nuORF;ENST00000507293.1_1_5:43298575-43313499:-|nuORF 45.739877483867886 0.0497104363764649 6 T{I|L}VEKSKSV 9 2 + 84.944 0.0 0.0 8.5839 8.5839 98.856 0.0 0.0 0.0 51.60663158696751 9.085842975353629 9.085842975353629 84.94383123087708 0 0.75 2.0 1.089136830878453 0.0 T{I|L}VEKSKSV 8.5839 - 530 + 1 2.22 73983.5 1.0 394 4202 4597 SUDHL4_400M_050219_2,4598 SUDHL4_400M_050219_2,4598,TIIDKSKSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4599 20.368 800.0 158050.0 25 0 9308.9 + 30353 RAFPNKQGY 9 119 540.7830949140231 1079.551636894846 2 540.7831909060478 MULTI CID FTMS 0 0 0 4597 161214.296875 0.4942736826533505 73 -0.6353988647460938 2 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 68.08070601005525 0.0218408846571049 6 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY 9 0 + 53.603 0.0 0.0 4.9653 4.9653 84.606 0.0 0.0 0.0 4.556070476787106 38.85601643943844 4.556070476787106 9.208187539523747 0 1.829689690656103 0.0 0.0 0.8473349592275301 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]KQGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[NP]K[AG]GY;{[CT]|[{M(Oxidation (M))|F}G]}[RK][PA]GQGY;{[CT]|[{M(Oxidation (M))|F}G]}[RK][QP]QGY;[HT]QK[KP][MN]P;Y{[DA]|[EG]}KN[RK]W;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]NT{[QN]|[E{I|L}]|[KN]}Y 4.9653;4.1123;2.6877;2.5245;2.4061;2.3315;0.37799 +;-;-;-;-;-;- + 458 1 2.22 100152.1 0.5899999737739563 395 4202 4597 SUDHL4_400M_050219_2,4599 SUDHL4_400M_050219_2,4599,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4602 20.381 345.0 171960.0 25 0 32035.0 + -1 IQRLETMK 8 68 517.7867112116512 0 517.7867309451103 PEAK CID FTMS 0 0 0 4601 111707.0078125 0.6482231424029374 2 -0.0128459930419921 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 13.90604991867851 0.4976509803484061 6 T 1 -1 20.044 0.0 0.0 1.9393 0.0 0.0 293.1413239341519 636.3468721979124 929.4881961320644 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 T 1.9393 + + 30 + 1 2.22 50936.3 1.0 396 4204 4601 SUDHL4_400M_050219_2,4602 SUDHL4_400M_050219_2,4602,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4605 20.401 800.0 125630.0 25 0 26044.0 + 30357 RAFPNKQGY 9 124 360.8574111152603 0 360.8573181033134 PEAK CID FTMS 0 0 0 4604 33738.5859375 0.2171472524143931 75 -0.6551189422607422 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 26.88365393820708 0.1386685954232994 6 N 1 8 7.3464 0.0 0.0 1.0208 0.0 0.0 111.40755797095184 491.2258394830688 602.6333974540206 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + N 1.0208 + + 17 + 1 2.22 85516.8 0.8199999928474426 397 4206 4604 SUDHL4_400M_050219_2,4605 SUDHL4_400M_050219_2,4605,RAFPNKQGY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4608 20.422 800.0 93221.0 25 0 10848.0 -1 QPHYRLCL 8 85 543.7806280103604 1085.5467030875209 2 543.7806274294853 MULTI CID FTMS 0 0 0 4607 104708.234375 0.0792816559363434 46 -0.3973903656005859 1 Carbamidomethyl (C) _QPHYRLC(Carbamidomethyl (C))L_ ENSG00000166037|ENST00000325542|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 32.116972079565 0.368454113111938 6 [QP]QDT[WK]A{I|L} 9 -1 [QP] + + 32.044 5.9814 2.6571 2.9519 2.9519 51.5 0.0 0.0 0.0 0.0 12.038654110982492 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.3807196863200844 [QP]QDT[WK]A{I|L} 2.9519 - 233 + 1 2.22 63604.3 0.4900000095367431 398 4208 4607 SUDHL4_400M_050219_2,4608 SUDHL4_400M_050219_2,4608,QPHYRLCL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4611 20.435 383.0 142700.0 25 0 24185.0 + 17647 KPTAAFHLL 9 60 499.2936521980932 996.5727514629864 2 499.2928344607353 MULTI CID FTMS 0 0 0 4610 94174.1953125 0.2387501423077407 8 -0.0734672546386718 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 16.942295170755138 0.3780752226737986 6 KPT 3 -1 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3489473932249 667.3489473932249 27.47425010840047 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPT 3.9829 + + 23 + 1 2.22 51698.3 1.0 399 4210 4610 SUDHL4_400M_050219_2,4611 SUDHL4_400M_050219_2,4611,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4612 20.449 800.0 89863.0 25 0 15828.0 + 26930 PDSTSITK 8 122 424.7224405855415 847.430328237883 2 424.7216979861259 MULTI CID FTMS 0 0 0 4610 91399.9375 1.0 0 0.0 2 Unmodified _PDSTSITK_ REV__ENSG00000147649|ENST00000336273|MTDH 11.640296217721598 0.738950129755968 6 DT[QT]TK 6 -1 24.23 0.0 0.0 2.8592 0.0 0.0 155.09694981865815 0.0 155.09694981865815 0.0 11.75585610201412 0.0 0.0 0 0.6747425010840047 0.0 0.6989700043360187 0.1421590589602531 DT[QT]TK 2.8592 - 78 + 1 2.22 58660.4 0.4099999964237213 400 4210 4610 SUDHL4_400M_050219_2,4612 SUDHL4_400M_050219_2,4612,PDSTSITK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4614 20.46 447.0 237860.0 25 0 55841.0 -1 0 41 1191.1413664957363 3570.4022700874093 3 1191.475756824017 MULTI CID FTMS 0 0 0 4613 376537.90625 0.1014759713459627 47 -0.3812770843505859 1 6 YG 2 -1 9.464 0.0 0.0 0.26507 0.0 0.0 1984.699219405572 1362.6038338178846 3347.303053223456 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG 0.26507 - 11 + 1 2.22 90634.0 1.0 401 4211 4613 SUDHL4_400M_050219_2,4614 SUDHL4_400M_050219_2,4614, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4615 20.474 800.0 126130.0 25 0 7375.8 -1 0 94 855.8392004041606 1709.663847875121 2 855.8400146365166 MULTI CID FTMS 0 0 0 4613 83034.453125 0.2121423877992094 -16 0.1549510955810547 2 6 EESEEVEHGEAHEAE 15 -1 + 125.29 0.0 0.0 7.3285 7.3285 87.919 0.0 0.0 0.0 5.440680443502757 6.112458363634829 5.440680443502757 5.440680443502757 0 3.7346368802282015 0.0 2.4916440611282624 0.0 EESEEVEHGEAHEAE;{[ES]|[DT]|[{I|L}C]}EEEVEHGEAHEAE;{[ES]|[DT]|[{I|L}C]}EEEK{M(Oxidation (M))|F}E{M(Oxidation (M))|F}AHEAE;{[ES]|[DT]|[{I|L}C]}EEEVSA{M(Oxidation (M))|F}{M(Oxidation (M))|F}AHEAE;{M(Oxidation (M))|F}AEHAWHEVEES[HC];{[ES]|[DT]|[{I|L}C]}EEEK{M(Oxidation (M))|F}{M(Oxidation (M))|F}EAHEAE;{[ES]|[DT]|[{I|L}C]}EEEKE{M(Oxidation (M))|F}{M(Oxidation (M))|F}AHEAE;EETDEVEHGEAHEAE;[DP]DEERHE{M(Oxidation (M))|F}AHEAE;{M(Oxidation (M))|F}AEHA{M(Oxidation (M))|F}EHR[HC]S[HC] 7.3285;7.0103;6.9821;6.9159;6.7452;6.6773;6.4255;6.4023;6.2167;6.176 -;-;-;-;-;-;-;-;-;- 25343 1 2.22 76513.2 0.3600000143051147 402 4211 4613 SUDHL4_400M_050219_2,4615 SUDHL4_400M_050219_2,4615, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4618 20.483 162.0 332800.0 25 0 31114.0 6 AAAAPLGAR 9 67 399.2351649644135 796.455776995627 2 399.2350646853447 MULTI CID FTMS 0 0 0 4617 345339.25 0.5503786560864027 -14 0.1475124359130859 1 Unmodified _AAAAPLGAR_ ENST00000426838.8_1_18:42260239-42281192:+|nuORF;REV__ENST00000345057.8_1_16:67188417-67189138:-|nuORF 28.486842064014134 0.1687311288560894 6 AAAAD 5 5 54.71 0.0 0.0 6.8692 0.0 0.0 0.0 394.2617211697083 394.2617211697083 50.75741123860296 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.2887254899964357 0.0 AAAAD 6.8692 - 63 1 2.22 48435.6 1.0 403 4213 4617 SUDHL4_400M_050219_2,4618 SUDHL4_400M_050219_2,4618,AAAAPLGAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4627 20.516 96.0 581960.0 25 0 87562.0 + -1 LTGWPLTMK 9 66 531.7843247213077 0 531.7841674685478 PEAK CID FTMS 0 0 0 4626 619640.4375 0.6168053303493822 27 -0.2182979583740234 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 32.78568957990786 0.0971838787772021 6 KTT 3 -1 36.242 0.0 0.0 3.4141 0.0 0.0 63.99866385884656 664.3428651580454 728.341529016892 0.0 0.0 0.0 0.0 0 1.0 0.0 1.305462187404089 0.0 KTT 3.4141 - 52 + 1 2.22 47467.6 1.0 404 4221 4626 SUDHL4_400M_050219_2,4627 SUDHL4_400M_050219_2,4627,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4631 20.531 196.0 230470.0 25 0 28618.0 17465 KPEGTPQRI 9 74 513.2905026136732 1024.5664522941463 2 513.2900268435478 MULTI CID FTMS 0 0 0 4630 145872.15625 0.4420149038059096 -8 0.0328922271728515 1 Unmodified _KPEGTPQRI_ ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 22.736283301280096 0.2418982879461534 6 KPT[VS]EAS 8 7 46.19 0.0 0.0 4.5083 0.0 0.0 0.0 222.12484155826408 222.12484155826408 35.23193848097671 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.5752574989159953 0.0 KPT[VS]EAS 4.5083 - 216 + 1 2.22 42053.8 1.0 405 4224 4630 SUDHL4_400M_050219_2,4631 SUDHL4_400M_050219_2,4631,KPEGTPQRI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4634 20.55 722.0 115760.0 25 0 9492.7 16512 KANKHIDQ 8 100 477.2615990110344 952.5086450888688 2 477.2608825564384 MULTI CID FTMS 0 0 0 4633 76535.2109375 0.7676257208068147 1 -0.0150432586669921 1 Unmodified _KANKHIDQ_ ENSG00000138472|ENST00000261047|GUCA1C;nc|ENSG00000138472|O95843-2|GUCA1C 10.073929032068715 0.7620901558688216 6 T{I|L}DGA 5 7 24.236 0.0 0.0 2.5444 0.0 0.0 477.2751637189469 0.0 477.2751637189469 0.0 10.256275913557031 0.0 0.0 0 0.4402794777712158 0.0 0.0 0.0 T{I|L}DGA 2.5444 - 76 1 2.22 69112.5 1.0 406 4226 4633 SUDHL4_400M_050219_2,4634 SUDHL4_400M_050219_2,4634,KANKHIDQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4637 20.569 755.0 82182.0 25 0 16974.0 16604 KEADLPEPSE 10 64 557.7654464130324 1113.5163398928646 2 557.7650634646416 MULTI CID FTMS 0 0 0 4636 58625.5390625 0.6227579074962383 -10 0.0542430877685546 1 Unmodified _KEADLPEPSE_ ENSG00000186868|ENST00000262410|MAPT;nc|ENSG00000186868|P10636-9|MAPT;nc|ENSG00000186868|P10636|MAPT 8.745405648335112 0.6861838735306406 6 YT{M(Oxidation (M))|F}K 4 10 22.141 0.0 0.0 1.9884 0.0 0.0 556.2576861836834 0.0 556.2576861836834 0.0 11.344340914803936 0.0 0.0 0 0.0 0.0 0.25 0.0 YT{M(Oxidation (M))|F}K 1.9884 - 40 + 1 2.22 52562.5 1.0 407 4228 4636 SUDHL4_400M_050219_2,4637 SUDHL4_400M_050219_2,4637,KEADLPEPSE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4638 20.583 800.0 92561.0 25 0 9189.8 + 31889 RTLTPISGGQR 11 102 395.8944872196119 1184.6616322590355 3 395.8942138552666 MULTI CID FTMS 0 0 0 4636 82046.609375 0.9310383132105652 6 -0.0837306976318359 2 Unmodified _RTLTPISGGQR_ ENSG00000085840|ENST00000371568|ORC1 20.87787396458995 0.6008632127290732 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TP{I|L}SG{[QG]|[NA]}R 11 0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}T + + 21.757 3.0417 0.64541 1.8366 1.8366 50.271 0.0 0.0 0.0 0.0 8.99293176385715 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.4802046884880938 + + {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TP{I|L}SG{[QG]|[NA]}R 1.8366 + + 88 + 1 2.22 66170.0 0.3600000143051147 408 4228 4636 SUDHL4_400M_050219_2,4638 SUDHL4_400M_050219_2,4638,RTLTPISGGQR False True RTLTPISGGQR 20.58312 395.894213855267 339553.1875 4636.0 ENSG00000085840|ENST00000371568|ORC1 7.466823736826579 3.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4641 20.594 147.0 430250.0 25 0 64780.0 + 42548 VTNVQTSTVDP 11 72 387.5315327359118 1159.5727688079355 3 387.5316650271416 MULTI CID FTMS 0 0 0 4640 227392.890625 0.7780616391044655 -6 0.0628089904785156 1 Unmodified _VTNVQTSTVDP_ REV__ENSG00000170322|ENST00000682444|NFRKB;REV__nc|ENSG00000170322|Q6P4R8-2|NFRKB;REV__nc|ENSG00000170322|Q6P4R8-3|NFRKB 10.150570793230772 0.8240029794358671 6 VTE{[RE]|[WV]}QR{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 + 45.185 0.0 0.0 3.8967 3.8967 76.987 0.0 0.0 0.0 24.71726222832956 4.771212547196626 4.771212547196626 4.771212547196626 0 0.0 0.8239087409443188 0.3807196863200844 0.3807196863200844 VTE{[RE]|[WV]}QR{[QD]|[EN]|[WG]|[KD]|[RS]};VTE{[RE]|[WV]}Q[HV]Y;VTE{[RE]|[WV]}[AG]R{[QD]|[EN]|[WG]|[KD]|[RS]} 3.8967;3.4852;3.1026 -;-;- 104 + 1 2.22 60071.8 1.0 409 4230 4640 SUDHL4_400M_050219_2,4641 SUDHL4_400M_050219_2,4641,VTNVQTSTVDP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4642 20.599 281.0 282290.0 25 0 53328.0 + 35 AAAPPAKEI 9 72 434.2504055756493 866.4862582180987 2 434.2502929568291 MULTI CID FTMS 0 0 0 4640 135737.515625 0.4086289698112636 -18 0.1136074066162109 2 Unmodified _AAAPPAKEI_ ENSG00000166851|ENST00000300093|PLK1 13.90604991867851 0.4602628045680013 6 [PA]KH 4 6 23.901 0.0 0.0 2.7584 0.0 0.0 0.0 430.2143086405832 430.2143086405832 -0.0514997831990626 0.0 -0.0514997831990626 0.0 0 0.0 1.2218487496163564 0.0 0.0 [PA]KH 2.7584 - 52 1 2.22 67509.1 1.0 410 4230 4640 SUDHL4_400M_050219_2,4642 SUDHL4_400M_050219_2,4642,AAAPPAKEI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4643 20.613 800.0 96319.0 25 0 27704.0 + 38998 TVREEGAGRW 10 71 580.7940043305452 1159.5734557278904 2 580.7938110232353 MULTI CID FTMS 0 0 0 4640 86171.734375 0.7902196298327239 -10 0.0796184539794921 3 Unmodified _TVREEGAGRW_ REV__ENST00000529313.5_1_11:17298611-17304373:+|nuORF 23.78978130925829 0.4341852049148378 6 VYRGW 5 -1 24.253 0.0 0.0 2.0915 0.0 0.0 480.23152358222814 0.0 480.23152358222814 0.0 13.551434250963936 0.0 0.0 0 0.3935078169319297 0.0 0.0 0.3494850021680094 VYRGW 2.0915 - 45 1 2.22 62184.0 0.4099999964237213 411 4230 4640 SUDHL4_400M_050219_2,4643 SUDHL4_400M_050219_2,4643,TVREEGAGRW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4646 20.633 800.0 92017.0 25 0 4742.8 + 30354 RAFPNKQGY 9 105 540.7830949140231 1079.551636894846 2 540.7830078005791 MULTI CID FTMS 0 0 0 4645 73071.109375 0.2240317827044272 103 -0.8802299499511719 1 Unmodified _RAFPNKQGY_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 54.773552608820026 0.0299037012502309 6 KQGY 4 5 45.834 0.0 0.0 4.2457 0.0 0.0 585.3026645923039 0.0 585.3026645923039 0.0 32.33919093648403 0.0 0.0 0 1.2614393726401687 0.0 0.0 0.8807196863200843 + KQGY 4.2457 + + 205 1 2.22 60612.6 0.4699999988079071 412 4232 4645 SUDHL4_400M_050219_2,4646 SUDHL4_400M_050219_2,4646,RAFPNKQGY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4649 20.649 534.0 159900.0 25 0 26882.0 + 30854 RILQETVK 8 82 493.80323062008 985.59190830696 2 493.8035156130791 MULTI CID FTMS 0 0 0 4648 113877.5625 0.2718718154727244 -17 0.142038345336914 1 Unmodified _RILQETVK_ ENSG00000156510|ENST00000354624|HKDC1 22.736283301280096 0.5659792798204337 6 VT[HK]TVK 7 5 43.805 0.0 0.0 4.4445 0.0 0.0 174.09753682434126 0.0 174.09753682434126 0.0 36.8149511042639 0.0 0.0 0 1.3494850021680094 0.0 0.3807196863200844 0.3807196863200844 VT[HK]TVK 4.4445 - 134 + 1 2.22 69237.7 1.0 413 4234 4648 SUDHL4_400M_050219_2,4649 SUDHL4_400M_050219_2,4649,RILQETVK False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4658 20.684 190.0 300230.0 25 0 37321.0 + 17691 KPTGARPSAL 10 66 499.2931694303658 996.5717859275316 2 499.2931396365166 MULTI CID FTMS 0 0 0 4657 294927.90625 0.2915464232812241 -17 0.1467475891113281 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 15.248480904072842 0.5916873121453583 6 KPT 3 7 39.693 0.0 0.0 3.9829 0.0 0.0 0.0 667.3536573469803 667.3536573469803 20.69644305573966 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 + KPT 3.9829 + + 23 + 1 2.22 49564.4 1.0 414 4242 4657 SUDHL4_400M_050219_2,4658 SUDHL4_400M_050219_2,4658,KPTGARPSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4659 20.697 800.0 18774.0 25 0 5394.0 -1 0 22 1058.4182960461972 3172.2330587387914 3 1058.752734363079 MULTI CID FTMS 0 0 0 4657 29544.25390625 0.381985039847847 1 -0.0200462341308593 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.22 23870.2 0.3100000023841858 415 4242 4657 SUDHL4_400M_050219_2,4659 SUDHL4_400M_050219_2,4659, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4664 20.726 800.0 63638.0 25 0 2898.4 -1 0 69 855.8392004041606 1709.663847875121 2 855.8386108279228 MULTI CID FTMS 0 0 0 4663 69451.59375 0.1774399225873826 19 -0.228281021118164 1 6 TEERHE{M(Oxidation (M))|F}AHEAE 12 -1 97.112 0.0 0.0 5.6802 0.0 0.0 226.05897719550936 0.0 226.05897719550936 0.0 68.23333891070098 0.0 0.0 0 1.5114393726401687 0.0 0.3807196863200844 0.2887254899964357 TEERHE{M(Oxidation (M))|F}AHEAE 5.6802 - 3171 1 2.22 42222.2 0.3499999940395355 416 4246 4663 SUDHL4_400M_050219_2,4664 SUDHL4_400M_050219_2,4664, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4667 20.737 266.0 245020.0 25 0 19587.0 7 AAAAPLGAR 9 79 399.2351649644135 796.455776995627 2 399.2350952029228 MULTI CID FTMS 0 0 0 4666 183694.9375 0.2927607355118937 21 -0.2239017486572265 1 Unmodified _AAAAPLGAR_ ENST00000426838.8_1_18:42260239-42281192:+|nuORF;REV__ENST00000345057.8_1_16:67188417-67189138:-|nuORF 53.57557251787612 0.0325303259649373 6 AAAAP 5 4 49.794 0.0 0.0 6.2519 0.0 0.0 0.0 412.2316988580688 412.2316988580688 29.336068845642203 0.0 0.0 0.0 0 1.6237125054200234 1.5228787452803376 0.0 0.0 + AAAAP 6.2519 + + 93 + 1 2.22 54462.3 1.0 417 4248 4666 SUDHL4_400M_050219_2,4667 SUDHL4_400M_050219_2,4667,AAAAPLGAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4671 20.762 800.0 60949.0 25 0 5784.0 + 2600 ASNDYTQQATQ 11 79 634.7730626643478 1267.5315723954957 2 634.7732421755791 MULTI CID FTMS 0 0 0 4670 105711.09375 1.0 0 0.0 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASNDYTQQATQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 55.50274090549119 0.0873970505193986 6 ATQ 3 8 37.769 0.0 0.0 2.9798 0.0 0.0 949.3781127781112 0.0 949.3781127781112 0.0 13.29664870991925 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.7302046884880937 + ATQ 2.9798 + + 507 + 1 2.22 41939.9 0.4099999964237213 418 4251 4670 SUDHL4_400M_050219_2,4671 SUDHL4_400M_050219_2,4671,ASNDYTQQATQ True False ASNDYTQQATQ 20.761534 634.773242175579 528046.625 4670.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 3.8613839944203696 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4674 20.778 558.0 183190.0 25 0 23663.0 + -1 LTGWPLTMK 9 100 531.7848984313885 1061.5552439295768 2 531.7841064333916 MULTI CID FTMS 0 0 0 4673 181645.375 0.9720288759860714 -1 0.0040607452392578 1 Oxidation (M) _LTGWPLTM(Oxidation (M))K_ REV__ENSG00000081019|ENST00000261441|RSBN1;REV__ENST00000476412.5_1_1:114308604-114340019:-|nuORF 32.78568957990786 0.1150597335874693 6 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K 9 -1 + 48.663 0.0 0.0 4.5841 4.5841 84.57 0.0 0.0 0.0 2.7102154270018275 36.89651225317682 2.7102154270018275 9.739152941678306 0 1.0 0.0 0.805462187404089 0.3494850021680094 [KT]T{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;[HT]V[KT]TT{M(Oxidation (M))|F}K;{[DS]|[MA]|[CV]|TT}K{[TV]|[{I|L}S]}HT{M(Oxidation (M))|F}K;[KT]{[{M(Oxidation (M))|F}H]|[RQ]}[PG]T{M(Oxidation (M))|F}K;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RV]HT{M(Oxidation (M))|F}K;[HT]VGH{[TV]|[{I|L}S]}[PS]K;[KT]T{[TV]|[{I|L}S]}HGV[YG];[KT]T{[TV]|[{I|L}S]}HR[YG];[TA]{[RE]|[WV]}[{I|L}P]T{M(Oxidation (M))|F}K;[KT]{[{M(Oxidation (M))|F}H]|[RQ]}[PG]TT{[CA]|SS} 4.5841;3.6666;3.4924;3.147;3.048;2.732;2.7278;2.6797;2.6759;2.562 -;-;-;-;-;-;-;-;-;- 731 1 2.22 81918.2 1.0 419 4253 4673 SUDHL4_400M_050219_2,4674 SUDHL4_400M_050219_2,4674,LTGWPLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4675 20.789 634.0 190820.0 25 0 35002.0 + -1 IQRLETMK 8 91 517.7867339088659 0 517.7865478396416 PEAK CID FTMS 0 0 0 4673 111454.8359375 0.746515512067453 -2 0.0204391479492187 2 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.3662555986329114 6 KTE[{I|L}P]ATT 8 -1 34.858 0.0 0.0 3.3726 0.0 0.0 63.99787885781718 125.07236658267811 189.0702454404953 0.0 0.0 0.0 0.0 0 0.5 0.0 1.774227503252014 0.0 KTE[{I|L}P]ATT 3.3726 - 285 + 1 2.22 96300.0 1.0 420 4253 4673 SUDHL4_400M_050219_2,4675 SUDHL4_400M_050219_2,4675,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4676 20.803 800.0 63705.0 25 0 18051.0 -1 0 25 1191.141403243635 3570.4023803311056 3 1191.476123034954 MULTI CID FTMS 0 0 0 4673 142197.9375 1.0 0 0.0 3 6 G 1 -1 6.9897 0.0 0.0 0.19577 0.0 0.0 2147.755482618594 1362.5996798151002 3510.355162433694 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19577 - 3 + 1 2.22 50747.6 0.3899999856948852 421 4253 4673 SUDHL4_400M_050219_2,4676 SUDHL4_400M_050219_2,4676, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4678 20.818 742.0 83713.0 25 0 8850.8 + 27463 PKEGTHTKK 9 93 513.2905026136732 1024.5664522941463 2 513.2905761599541 MULTI CID FTMS 0 0 0 4677 76431.0625 0.2315977881400582 22 -0.1788978576660156 1 Unmodified _PKEGTHTKK_ REV__ENSG00000005801|ENST00000399602|ZNF195;REV__ENSG00000005801|ENST00000399602|ZNF195;REV__ENSG00000166704|ENST00000551380|ZNF606;REV__ENSG00000196418|ENST00000543802|ZNF124;REV__ENST00000436625.1_1_7:63930096-63930567:+|nuORF;REV__nc|ENSG00000005801|O14628-4|ZNF195;REV__nc|ENSG00000005801|O14628-4|ZNF195;REV__nc|ENSG00000005801|O14628-5|ZNF195;REV__nc|ENSG00000005801|O14628-5|ZNF195;REV__nc|ENSG00000005801|O14628-6|ZNF195;REV__nc|ENSG00000005801|O14628-6|ZNF195;REV__nc|ENSG00000005801|O14628-7|ZNF195;REV__nc|ENSG00000005801|O14628-7|ZNF195;REV__nc|ENSG00000196418|Q15973-1|ZNF124;REV__nc|ENSG00000196418|Q15973-2|ZNF124;REV__nc|ENSG00000196418|Q15973-4|ZNF124 30.63653989081413 0.1413794767160703 6 KPTW 4 -1 46.542 0.0 0.0 4.5426 0.0 0.0 0.0 509.2744234674437 509.2744234674437 28.04403712585568 0.0 0.0 0.0 0 1.274227503252014 0.0 0.4247425010840047 0.0 KPTW 4.5426 - 161 + 1 2.22 54632.7 1.0 422 4254 4677 SUDHL4_400M_050219_2,4678 SUDHL4_400M_050219_2,4678,PKEGTHTKK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4684 20.852 800.0 106950.0 25 0 16601.0 -1 PTIPFNLMK 9 96 538.7921158431403 1075.5696787530806 2 538.7921020388603 MULTI CID FTMS 0 0 0 4683 76784.7734375 0.3323535755146865 -15 0.1330127716064453 1 Oxidation (M) _PTIPFNLM(Oxidation (M))K_ ENSG00000149256|ENST00000278550|TENM4 29.081581746732265 0.1611639662936252 6 T{M(Oxidation (M))|F}K 3 -1 39.169 0.0 0.0 3.6417 0.0 0.0 681.3808620943769 0.0 681.3808620943769 0.0 21.505149978319903 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}K 3.6417 - 195 1 2.22 72730.7 0.5 423 4259 4683 SUDHL4_400M_050219_2,4684 SUDHL4_400M_050219_2,4684,PTIPFNLMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4685 20.866 800.0 118510.0 25 0 9021.8 + 27053 PEQWTAGVIS 10 108 544.2730902391849 1086.5316275451696 2 544.2726928591728 MULTI CID FTMS 0 0 0 4683 127976.9375 0.6273295683712549 -9 0.0934600830078125 2 Unmodified _PEQWTAGVIS_ REV__ENSG00000064763|ENST00000536681|FAR2;REV__nc|ENSG00000064763|Q96K12-2|FAR2 21.53697664764585 0.484802182336468 6 EPQDT[WK]A{I|L} 9 -1 + 49.589 0.0 0.0 4.5639 4.5639 83.329 0.0 0.0 0.0 16.2684116877481 13.16061246681059 13.16061246681059 9.208187539523747 0 0.0 0.0 0.7742275032520141 0.3252574989159953 EPQDT[WK]A{I|L};EP[AG]DT[WK]A{I|L};WW[NG]G{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[QG]|[NA]}T[WK]A{I|L};WW{NN|[MP]|[D{I|L}]|[EV]}{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L} 4.5639;3.7164;1.1348;0.70803;0.14762 -;-;-;-;- 916 + 1 2.22 77413.0 0.5 424 4259 4683 SUDHL4_400M_050219_2,4685 SUDHL4_400M_050219_2,4685,PEQWTAGVIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4686 20.879 750.0 130090.0 25 0 15304.0 + + 34230 TVPPPPAAA 9 113 410.7321134417925 819.4496739503851 2 410.7316161990166 MULTI CID FTMS 0 0 0 4683 96825.7265625 0.3402864990060225 -7 0.0730209350585937 3 Unmodified _SLPPPAPAA_ ENSG00000150990|ENST00000308736|DHX37 40.44857923139169 0.0729940656229577 6 {[TV]|[{I|L}S]}PPP[PA]AA 9 -1 + 51.621 0.0 0.0 6.2995 6.2995 91.942 0.0 0.0 0.0 32.959252469304296 11.884249941294058 11.884249941294058 16.197887582883936 0 0.6549471895720984 2.0 0.0 0.0 {[TV]|[{I|L}S]}PPP[PA]AA;{[TV]|[{I|L}S]}[YK][PA]AA;{[TV]|[{I|L}S]}PPP{[NV]|[RG]}P;{[TV]|[{I|L}S]}QVQV{M(Oxidation (M))|F};{[TV]|[{I|L}S]}PP{[NV]|[RG]}PP;{[TV]|[{I|L}S]}QV[AG]V{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[AG]VQV{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[YK]{[NV]|[RG]}P;{[TV]|[{I|L}S]}[AG]V[AG]V{M(Oxidation (M))|F} 6.2995;4.3228;4.1496;3.6718;2.951;2.5332;2.5332;2.1812;1.4029 +;-;-;-;-;-;-;-;- + 238 + 1 2.22 79160.5 1.0 425 4259 4683 SUDHL4_400M_050219_2,4686 SUDHL4_400M_050219_2,4686,SLPPPAPAA False False TVPPPPAAA 20.879139 410.731616199017 1230150.5 4683.0 ENSG00000150990|ENST00000308736|DHX37 2.4874308109283447 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4688 20.887 289.0 287170.0 25 0 30093.0 + 36 AAAPPAKEI 9 91 434.2504055756493 866.4862582180987 2 434.2492248415947 MULTI CID FTMS 0 0 0 4687 224340.203125 0.6753616026351843 12 -0.0866355895996093 1 Unmodified _AAAPPAKEI_ ENSG00000166851|ENST00000300093|PLK1 13.90604991867851 0.4602628045680013 6 [PA]KH 4 6 25.406 0.0 0.0 2.9321 0.0 0.0 0.0 430.2131330224937 430.2131330224937 2.2454626555970947 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [PA]KH 2.9321 - 88 1 2.22 69176.0 1.0 426 4260 4687 SUDHL4_400M_050219_2,4688 SUDHL4_400M_050219_2,4688,AAAPPAKEI False True AAAPPAKEI 20.886968 434.249224841595 4838347.0 4687.0 ENSG00000166851|ENST00000300093|PLK1 3.8687008221944175 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4689 20.89 159.0 263880.0 25 0 67191.0 + + -1 ALSPNNHEV 9 61 490.74340100279176 979.4722490723836 2 490.7433654665947 MULTI CID FTMS 0 0 0 4687 128568.28125 0.3446976507490092 -8 0.1176033020019531 2 Oxidation (M) _LASPM(Oxidation (M))IMTT_ ENSG00000241685|ENST00000262942|ARPC1A 15.847184025352805 0.4077185912009129 6 [{I|L}A]SP 4 -1 45.445 0.0 0.0 4.6398 0.0 0.0 0.0 608.2430513971311 608.2430513971311 38.4556125503638 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 [{I|L}A]SP 4.6398 + + 30 + 1 2.22 35465.9 1.0 427 4260 4687 SUDHL4_400M_050219_2,4689 SUDHL4_400M_050219_2,4689,LASPMIMTT False False ALSPNNHEV 20.890095 490.743365466595 1848760.375 4687.0 ENSG00000241685|ENST00000262942|ARPC1A 4.1037669976552325 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4690 20.904 800.0 69868.0 25 0 21055.0 -1 0 26 1163.4816283750135 3487.423055725241 3 1163.814501941204 MULTI CID FTMS 0 0 0 4687 139195.59375 0.509640734471564 -11 0.1419277191162109 3 6 G 1 -1 6.9897 0.0 0.0 0.20043 0.0 0.0 2147.7546146934574 1279.6271332611227 3427.38174795458 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20043 - 3 + 1 2.22 59534.9 0.4099999964237213 428 4260 4687 SUDHL4_400M_050219_2,4690 SUDHL4_400M_050219_2,4690, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4692 20.92 800.0 113500.0 25 0 17925.0 + 30855 RILQETVK 8 92 493.80323062008 985.59190830696 2 493.8033019900322 MULTI CID FTMS 0 0 0 4691 79557.3046875 0.189935474422429 10 -0.0577812194824218 1 Unmodified _RILQETVK_ ENSG00000156510|ENST00000354624|HKDC1 22.736283301280096 0.5659792798204337 6 TVK 3 5 44.693 0.0 0.0 4.5346 0.0 0.0 639.3724969172137 0.0 639.3724969172137 0.0 23.26606256887672 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 + TVK 4.5346 + + 178 1 2.22 75401.4 0.5699999928474426 429 4261 4691 SUDHL4_400M_050219_2,4692 SUDHL4_400M_050219_2,4692,RILQETVK False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4693 20.925 250.0 327390.0 25 0 36034.0 + 16753 KFKFPGRQK 9 78 379.2293536512714 1134.6662315540143 3 379.2292358279228 MULTI CID FTMS 0 0 0 4691 146778.546875 0.2893887027026827 -23 0.2426071166992187 2 Unmodified _KFKFPGRQK_ ENSG00000147403|ENST00000369817|RPL10;ENSG00000165496|ENST00000298283|RPL10L;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;ENST00000491035.5_1_X:153628724-153629192:+|nuORF 30.63653989081413 0.1413794767160703 6 K{M(Oxidation (M))|F}K{M(Oxidation (M))|F}K[EP]{M(Oxidation (M))|F} 8 5 54.602 0.0 0.0 4.8122 0.0 0.0 0.0 80.05126367740468 80.05126367740468 41.04733715741826 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.8494850021680094 K{M(Oxidation (M))|F}K{M(Oxidation (M))|F}K[EP]{M(Oxidation (M))|F} 4.8122 - 103 + 1 2.22 71094.9 1.0 430 4261 4691 SUDHL4_400M_050219_2,4693 SUDHL4_400M_050219_2,4693,KFKFPGRQK False True KFKFPGRQK 20.924953 379.229235827923 2538524.25 4691.0 ENST00000491035.5_1_X:153628724-153629192:+|nuORF;;ENST00000467168.5_1_X:153626860-153629039:+|nuORF;;ENSG00000147403|ENST00000369817|RPL10;;ENSG00000165496|ENST00000298283|RPL10L 4.891990502675374 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4696 20.934 74.0 672340.0 25 0 89588.0 + 17692 KPTGARPSAL 10 64 499.2931694303658 996.5717859275316 2 499.2929565310478 MULTI CID FTMS 0 0 0 4695 754777.75 0.7461238788242 4 -0.0168361663818359 1 Unmodified _KPTGARPSAL_ ENSG00000227057|ENST00000374617|WDR46;ENST00000473611.5_1_6:33247055-33247262:-|nuORF 13.614867670302877 0.6190977555336379 6 KPT 3 7 40.445 0.0 0.0 4.0584 0.0 0.0 0.0 667.3537223297337 667.3537223297337 26.422264452979107 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 + KPT 4.0584 + + 38 + 1 2.22 42168.8 1.0 431 4263 4695 SUDHL4_400M_050219_2,4696 SUDHL4_400M_050219_2,4696,KPTGARPSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4711 21.002 800.0 59828.0 25 0 8255.3 -1 0 43 583.9265708867784 2914.596472100892 5 584.3275634646416 MULTI CID FTMS 0 0 0 4710 32716.912109375 0.4869626960736717 1 -0.0163555145263671 1 6 {I|L}[YC(Carbamidomethyl (C))]Q 4 -1 16.198 0.0 0.0 0.55575 0.0 0.0 2332.299352116947 0.0 2332.299352116947 0.0 15.228787452803374 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}[YC(Carbamidomethyl (C))]Q 0.55575 - 8 1 2.22 44614.5 0.4199999868869781 432 4277 4710 SUDHL4_400M_050219_2,4711 SUDHL4_400M_050219_2,4711, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4714 21.022 800.0 27971.0 25 0 5977.9 -1 0 25 1155.4500913776285 3463.328444733085 3 1156.453417956829 MULTI CID FTMS 0 0 0 4713 35428.8828125 0.1548172401566601 -14 0.0682754516601562 1 6 A 1 -1 4.6041 0.0 0.0 0.13294 0.0 0.0 2553.9127537159206 835.3585909479124 3389.271344663833 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.13294 - 2 + 1 2.22 29030.9 0.2899999916553497 433 4279 4713 SUDHL4_400M_050219_2,4714 SUDHL4_400M_050219_2,4714, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4715 21.036 800.0 131570.0 25 0 9459.7 + 2477 AQYEDIAQK 9 116 533.2649440560792 1064.5153351789584 2 533.2635375857353 MULTI CID FTMS 0 0 0 4713 122733.9375 0.7374912402064945 -12 0.0602397918701171 2 Unmodified _AQYEDIAQK_ ENSG00000167768|ENST00000252244|KRT1 47.594388314883695 0.0456443387682827 6 [QA]YED{I|L}AQK 9 0 [QA] + + 55.681 18.015 9.0484 5.2307 5.2307 58.137 0.0 0.0 0.0 0.0 41.244416773225865 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.9095680409956016 + + [QA]YED{I|L}AQK 5.2307 + + 421 + 1 2.22 83879.4 0.5199999809265137 434 4279 4713 SUDHL4_400M_050219_2,4715 SUDHL4_400M_050219_2,4715,AQYEDIAQK True True AQYEDIAQK 21.036282 533.263537585735 670784.8125 4713.0 ENSG00000167768|ENST00000252244|KRT1 7.527084827423096 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4722 21.073 800.0 106390.0 25 0 7229.7 + 25294 NADPASHEI 9 104 477.2197380876585 952.4249232421172 2 477.2198364138603 MULTI CID FTMS 0 0 0 4721 70610.921875 0.5844293784492411 -15 0.0985374450683593 1 Unmodified _NADPASHEI_ ENSG00000136699|ENST00000680298|SMPD4;ENST00000415574.6_1_2:132258965-132266117:+|nuORF;ENST00000433118.5_1_2:130917171-130932539:-|nuORF;ENST00000473720.5_1_2:130913661-130934206:-|nuORF;nc|ENSG00000136699|Q9NXE4-2|SMPD4;nc|ENSG00000136699|Q9NXE4-3|SMPD4;nc|ENSG00000136699|Q9NXE4-4|SMPD4;nc|ENSG00000136699|Q9NXE4-6|SMPD4;nc|ENSG00000136699|Q9NXE4|SMPD4 41.8396318013385 0.0653578398400075 6 NADPAS 6 3 58.353 0.0 0.0 6.1267 0.0 0.0 0.0 394.1737154596313 394.1737154596313 45.8783628755652 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + NADPAS 6.1267 + + 332 + 1 2.22 72114.5 0.4300000071525574 435 4285 4721 SUDHL4_400M_050219_2,4722 SUDHL4_400M_050219_2,4722,NADPASHEI True True NADPASHEI 21.072584 477.21983641386 642316.5625 4721.0 nc|ENSG00000136699|Q9NXE4-4|SMPD4;;nc|ENSG00000136699|Q9NXE4-3|SMPD4;;ENSG00000136699|ENST00000680298|SMPD4;;ENST00000433118.5_1_2:130917171-130932539:-|nuORF;;nc|ENSG00000136699|Q9NXE4-6|SMPD4;;nc|ENSG00000136699|Q9NXE4-2|SMPD4;;ENST00000415574.6_1_2:132258965-132266117:+|nuORF;;ENST00000473720.5_1_2:130913661-130934206:-|nuORF;;nc|ENSG00000136699|Q9NXE4|SMPD4 6.48183027903239 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4728 21.102 597.0 156100.0 25 0 26444.0 + -1 EKLNGQLMK 9 94 538.7921158431403 1075.5696787530806 2 538.7921020388603 MULTI CID FTMS 0 0 0 4727 176245.59375 0.7628576686392126 16 -0.169961929321289 1 Oxidation (M) _EKLNGQLM(Oxidation (M))K_ REV__ENSG00000129596|ENST00000250535|CDO1;REV__ENST00000502631.1_1_5:115145323-115152339:-|nuORF 22.736283301280096 0.2418982879461534 6 T{M(Oxidation (M))|F}K 3 -1 39.495 0.0 0.0 3.672 0.0 0.0 681.3809840669436 0.0 681.3809840669436 0.0 19.624759215276622 0.0 0.0 0 1.305462187404089 0.0 0.0 0.3252574989159953 T{M(Oxidation (M))|F}K 3.672 - 183 + 1 2.22 72755.3 1.0 436 4290 4727 SUDHL4_400M_050219_2,4728 SUDHL4_400M_050219_2,4728,EKLNGQLMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4730 21.114 583.0 119840.0 25 0 25838.0 + 40256 VGSYHLSDPL 10 81 544.2730902391849 1086.5316275451696 2 544.2739745974541 MULTI CID FTMS 0 0 0 4729 82645.3359375 0.4051187966704488 23 -0.2139205932617187 1 Unmodified _VGSYHLSDPL_ REV__ENSG00000135424|ENST00000257879|ITGA7;REV__nc|ENSG00000135424|Q13683-10|ITGA7;REV__nc|ENSG00000135424|Q13683-13|ITGA7;REV__nc|ENSG00000135424|Q13683-3|ITGA7;REV__nc|ENSG00000135424|Q13683|ITGA7 20.453626601364224 0.5043500229302764 6 [EP]QDT[WK]A{I|L} 9 -1 + 43.918 0.0 0.0 4.042 4.042 75.163 0.0 0.0 0.0 24.45386945443112 11.655462488490684 11.655462488490684 2.730012720637376 0 0.0 1.154901959985743 0.0 0.3494850021680094 [EP]QDT[WK]A{I|L};[EP]Q{[MG]|[TS]}{I|L}{[WN]|[YH]}{I|L};[EP][C(Carbamidomethyl (C))R]{I|L}{[WN]|[YH]}{I|L};[EP][AG]DT[WK]A{I|L};{[TV]|[{I|L}S]}[KC]{I|L}{[MG]|[TS]}Q[HA] 4.042;3.7908;3.1945;3.1945;1.2124 -;-;-;-;- 91 + 1 2.22 57394.1 1.0 437 4291 4729 SUDHL4_400M_050219_2,4730 SUDHL4_400M_050219_2,4730,VGSYHLSDPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4732 21.127 595.0 102750.0 25 0 7529.2 + 34231 SLPPPAPAA 9 107 410.7321134417925 819.4496739503851 2 410.7316161990166 MULTI CID FTMS 0 0 0 4731 93590.359375 0.3289160522010333 26 -0.2253894805908203 1 Unmodified _SLPPPAPAA_ REV__ENSG00000204371|ENST00000375537|EHMT2;REV__ENST00000480912.5_1_6:31847863-31860642:-|nuORF;REV__nc|ENSG00000204371|Q96KQ7-2|EHMT2 34.18733598223924 0.1073653526364521 6 {[TV]|[{I|L}S]}PPP[PA]AA 9 -1 + 42.546 0.0 0.0 5.192 5.192 87.714 0.0 0.0 0.0 27.06153761089837 8.249256301612746 8.249256301612746 13.187587626244124 0 0.3494850021680094 2.0 0.0 0.0 {[TV]|[{I|L}S]}PPP[PA]AA;{[TV]|[{I|L}S]}[YK][PA]AA;{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}{[VA]|[{I|L}G]}G{M(Oxidation (M))|F} 5.192;3.5827;1.531 +;-;- + 199 + 1 2.22 55857.8 1.0 438 4292 4731 SUDHL4_400M_050219_2,4732 SUDHL4_400M_050219_2,4732,SLPPPAPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4735 21.148 800.0 98711.0 25 0 9720.1 + 8956 FANDDRHVM 9 100 560.7455180511035 1119.476483169007 2 560.7453491091728 MULTI CID FTMS 0 0 0 4734 81653.8671875 0.548950859796002 -7 0.0549507141113281 1 Oxidation (M) _FANDDRHVM(Oxidation (M))_ ENSG00000165209|ENST00000348403|STRBP 59.36838082759317 0.0264317782606298 6 {M(Oxidation (M))|F}ANDDRHV{M(Oxidation (M))|F} 9 0 + 69.313 0.0 0.0 6.1916 6.1916 88.846 0.0 0.0 0.0 49.47025986567944 14.09256854528806 14.09256854528806 9.208187539523747 0 2.1747425010840047 0.0 0.0 0.3054621874040891 + + {M(Oxidation (M))|F}ANDDRHV{M(Oxidation (M))|F};{M(Oxidation (M))|F}AGGDDRHV{M(Oxidation (M))|F};[YT]H[VG]DDN{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}N[Y{I|L}][C(Carbamidomethyl (C))S]V{M(Oxidation (M))|F};[YT]HRDD[WQ];[YT]HRD{[WN]|[YH]}E;{[MS]|[{M(Oxidation (M))|F}A]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}C(Carbamidomethyl (C))VT[YT];[YT]H[VG]DDGG{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}N[Y{I|L}]D[KC]{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}N[Y{I|L}][WC(Carbamidomethyl (C))]{M(Oxidation (M))|F} 6.1916;5.369;2.6926;2.6047;2.5531;2.0164;1.7712;1.6011;1.577;1.2672 +;-;-;-;-;-;-;-;-;- + 489 + 1 2.22 63337.1 0.4699999988079071 439 4294 4734 SUDHL4_400M_050219_2,4735 SUDHL4_400M_050219_2,4735,FANDDRHVM True False FANDDRHVM 21.147842 560.745349109173 605006.625 4734.0 ENSG00000165209|ENST00000348403|STRBP 10.14609146118164 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4741 21.178 662.0 105020.0 25 0 7137.4 + 31971 RVFDKDGNGY 10 93 585.7803010714645 1169.5460492097288 2 585.7808105349541 MULTI CID FTMS 0 0 0 4740 98876.328125 0.7570812254812554 -8 0.0622329711914062 1 Unmodified _RVFDKDGNGY_ ENSG00000143933|ENST00000272298|CALM2;ENSG00000160014|ENST00000291295|CALM3;ENSG00000198668|ENST00000356978|CALM1;ENST00000482532.5_1_2:47387917-47389823:-|nuORF 43.9818466556824 0.1155196613165264 6 [RV]{M(Oxidation (M))|F}DKDGN 8 2 66.336 0.0 0.0 5.6719 0.0 0.0 0.0 235.07400140399707 235.07400140399707 45.36683765109139 0.0 0.0 0.0 0 0.9247425010840048 1.0457574905606752 0.4247425010840047 0.4247425010840047 + [RV]{M(Oxidation (M))|F}DKDGN 5.6719 + + 133 1 2.22 59594.4 1.0 440 4299 4740 SUDHL4_400M_050219_2,4741 SUDHL4_400M_050219_2,4741,RVFDKDGNGY True True RVFDKDGNGY 21.177992 585.780810534954 642522.375 4740.0 ENSG00000160014|ENST00000291295|CALM3;;ENSG00000198668|ENST00000356978|CALM1;;ENSG00000143933|ENST00000272298|CALM2;;ENST00000482532.5_1_2:47387917-47389823:-|nuORF 10.88998794555664 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4744 21.198 800.0 91059.0 25 0 6664.0 + 38283 TQAYGQQSY 9 107 523.232816014127 1044.451079095054 2 523.2328979372978 MULTI CID FTMS 0 0 0 4743 83975.65625 0.456861039639764 -7 0.0506095886230468 1 Unmodified _TQAYGQQSY_ ENSG00000182944|ENST00000397938|EWSR1;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;nc|ENSG00000182944|Q01844-2|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1 28.49450938151212 0.1686335738423394 6 [AG]TAYGQ 7 6 38.597 0.0 0.0 3.6955 0.0 0.0 0.0 393.1399841911888 393.1399841911888 10.894422353779149 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.6171302707394362 0.0 [AG]TAYGQ 3.6955 - 473 1 2.22 59385.0 0.4600000083446502 441 4301 4743 SUDHL4_400M_050219_2,4744 SUDHL4_400M_050219_2,4744,TQAYGQQSY False True TQAYGQQSY 21.198452 523.232897937298 713287.9375 4743.0 nc|ENSG00000182944|Q01844-6|EWSR1;;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;;nc|ENSG00000182944|Q01844-5|EWSR1;;nc|ENSG00000182944|Q01844-4|EWSR1;;nc|ENSG00000182944|Q01844-3|EWSR1;;nc|ENSG00000182944|Q01844-2|EWSR1;;ENSG00000182944|ENST00000397938|EWSR1 6.749457359313965 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4745 21.204 311.0 276550.0 25 0 88628.0 24316 MDWLVRNVTY 10 55 432.88506029001866 0 432.8849365115166 PEAK CID FTMS 0 0 0 4743 133412.8125 0.623773408250645 -227 1.8603382110595703 2 Unmodified _MDWLVRNVTY_ ENSG00000093072|ENST00000399837|ADA2 1.7422754331352035 0.3961065659209837 6 V 1 9 2.4743 0.0 0.0 0.28645 0.0 0.0 131.36434557828107 630.2982271783811 761.6625727566623 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.28645 + + 1 + 1 2.22 74562.6 1.0 442 4301 4743 SUDHL4_400M_050219_2,4745 SUDHL4_400M_050219_2,4745,MDWLVRNVTY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4746 21.218 800.0 193210.0 25 0 17769.0 + 31215 RLQEVTHSV 9 119 534.7933032958771 1067.572053658554 2 534.7932617068291 MULTI CID FTMS 0 0 0 4743 126010.1484375 0.2451908430784587 -9 0.0676155090332031 3 Unmodified _RLQEVTHSV_ ENSG00000139626|ENST00000267082|ITGB7;ENST00000549462.1_1_12:53591166-53600997:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7 72.96794272382148 0.0199516581995792 6 {[QN]|[E{I|L}]|[KN]}V[KG]VTHSV 10 4 + 63.822 0.0 0.0 5.9783 5.9783 85.558 0.0 0.0 0.0 1.6554624884906843 34.54628427264403 1.6554624884906843 6.931890546242343 0 1.110924374808178 0.0 2.110924374808178 0.0 {[QN]|[E{I|L}]|[KN]}V[KG]VTHSV;V{[QN]|[E{I|L}]|[KN]}TV[KG]HSV;{[QN]|[E{I|L}]|[KN]}VKKEHSV;V{[QN]|[E{I|L}]|[KN]}EKKHSV;{[QN]|[E{I|L}]|[KN]}KKVEHSV;{[QN]|[E{I|L}]|[KN]}VTKKHDV;{[QN]|[E{I|L}]|[KN]}V[RK]GHMV;{[QN]|[E{I|L}]|[KN]}VKKTHDV;V{[QN]|[E{I|L}]|[KN]}TV[KG]VSH;[VS]QQKKHDV 5.9783;5.329;5.2918;4.6425;4.6094;4.5097;4.048;3.8084;3.6149;3.3663 -;-;-;-;-;-;-;-;-;- 817 1 2.22 120721.9 0.5199999809265137 443 4301 4743 SUDHL4_400M_050219_2,4746 SUDHL4_400M_050219_2,4746,RLQEVTHSV True True RLQEVTHSV 21.217954 534.793261706829 3906508.0 4743.0 ENST00000549462.1_1_12:53591166-53600997:-|nuORF;;ENSG00000139626|ENST00000267082|ITGB7;;nc|ENSG00000139626|P26010-2|ITGB7 6.289480209350586 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4749 21.238 800.0 120840.0 25 0 18146.0 + 34658 SPPPPPPPP 9 111 441.7401431015701 881.4657332699402 2 441.7397033572197 MULTI CID FTMS 0 0 0 4748 94279.859375 0.3082484181728865 -24 0.2159805297851562 1 Unmodified _SPPPPPPPP_ ENSG00000103479|ENST00000262133|RBL2;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENSG00000099999|ENST00000382363|RNF215;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000136754|Q8IZP0-8|ABI1;ENSG00000100312|ENST00000216139|ACR;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-10|ABI1;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;ENSG00000139800|ENST00000267294|ZIC5;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000164944|Q69YN4-4|VIRMA;ENSG00000109920|ENST00000263773|FNBP4;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000260428|ENST00000567180|SCX;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000109920|Q8N3X1-2|FNBP4;ENSG00000274209|ENST00000620264|ANTXRL;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000136754|ENST00000376140|ABI1;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;ENSG00000107816|ENST00000454422|LZTS2;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;ENSG00000184863|ENST00000401878|RBM33;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217;nc|ENSG00000136754|Q8IZP0-12|ABI1 93.88341677533236 0.0134066622201488 6 [PS]PPPPKY 8 3 + 70.311 0.0 0.0 7.9766 7.9766 96.513 0.0 0.0 0.0 20.66946789630613 53.511135643454615 20.66946789630613 22.21848749616356 0 1.3650219788552205 2.0 1.3807196863200843 0.0 [PS]PPPPKY;{[HG]|PP}SPPPKY;[PS][YK]PKY;[YK]SPPKY;{[HG]|PP}PSPPKY;[PS]P[YK]KY;[YK]PSPKY;{[HG]|PP}PPSPKY;{[NV]|[RG]}[YV]PKY;{[HG]|PP}S[YK]KY 7.9766;5.4559;5.0637;5.0139;4.9481;3.9602;3.48;3.4142;1.7776;1.4396 -;-;-;-;-;-;-;-;-;- 259 1 2.22 82226.1 0.4399999976158142 444 4303 4748 SUDHL4_400M_050219_2,4749 SUDHL4_400M_050219_2,4749,SPPPPPPPP False False SPPPPPPPP 21.238379 441.73970335722 17153544.0 4748.0 ENSG00000103479|ENST00000262133|RBL2;;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;;ENSG00000099999|ENST00000382363|RNF215;;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;;nc|ENSG00000136754|Q8IZP0-8|ABI1;;ENSG00000100312|ENST00000216139|ACR;;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;;nc|ENSG00000136754|Q8IZP0-7|ABI1;;nc|ENSG00000136754|Q8IZP0-10|ABI1;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000136754|Q8IZP0-11|ABI1;;nc|ENSG00000136754|Q8IZP0-3|ABI1;;ENSG00000139800|ENST00000267294|ZIC5;;nc|ENSG00000136754|Q8IZP0-5|ABI1;;nc|ENSG00000164944|Q69YN4-4|VIRMA;;ENSG00000109920|ENST00000263773|FNBP4;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000260428|ENST00000567180|SCX;;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;;nc|ENSG00000109920|Q8N3X1-2|FNBP4;;ENSG00000274209|ENST00000620264|ANTXRL;;nc|ENSG00000136754|Q8IZP0-4|ABI1;;nc|ENSG00000136754|Q8IZP0-6|ABI1;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA;;ENSG00000136754|ENST00000376140|ABI1;;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;;ENSG00000107816|ENST00000454422|LZTS2;;nc|ENSG00000136754|Q8IZP0-2|ABI1;;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;;ENSG00000184863|ENST00000401878|RBM33;;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;;ENSG00000126461|ENST00000360565|SCAF1;;ENSG00000127666|ENST00000248244|TICAM1;;nc|ENSG00000136754|Q8IZP0|ABI1;;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;;ENSG00000120549|ENST00000376454|KIAA1217;;nc|ENSG00000136754|Q8IZP0-12|ABI1 4.815529664357503 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4752 21.259 800.0 161560.0 25 0 25823.0 + 5099 DHNDGLGNAF 10 110 530.2282542958646 1058.4419556585292 2 530.2279540896416 MULTI CID FTMS 0 0 0 4751 129541.9609375 0.2320901023015611 -20 0.1860389709472656 1 Unmodified _DHNDGLGNAF_ ENSG00000271447|ENST00000605424|MMP28 27.628801355627647 0.3479284626772844 6 [HD]EAQQNA{M(Oxidation (M))|F} 9 5 + 89.218 0.0 0.0 8.4292 8.4292 93.447 0.0 0.0 0.0 17.147642715192504 62.73509716672216 17.147642715192504 9.208187539523747 0 0.9247425010840048 1.0 0.6861818737241735 0.8494850021680094 [HD]EAQQNA{M(Oxidation (M))|F};[HD]EAQQGGA{M(Oxidation (M))|F};[HD]EAQ[AG]NA{M(Oxidation (M))|F};[HD]EA[AG]QNA{M(Oxidation (M))|F};[HD]EAQ[AG]GGA{M(Oxidation (M))|F};[HD]EA[AG]QGGA{M(Oxidation (M))|F};[HD]Q{[CP]|[EA]}QNA{M(Oxidation (M))|F};[HD]EA[AG][AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}EEHQNA{M(Oxidation (M))|F};[HD][AG]{[CP]|[EA]}QNA{M(Oxidation (M))|F} 8.4292;7.5592;7.5592;7.5592;6.6934;6.6934;6.604;6.2921;5.7449;5.734 -;-;-;-;-;-;-;-;-;- 701 1 2.22 103765.6 0.4900000095367431 445 4305 4751 SUDHL4_400M_050219_2,4752 SUDHL4_400M_050219_2,4752,DHNDGLGNAF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4755 21.279 800.0 117320.0 25 0 31426.0 -1 0 43 1155.4500913776285 3463.328444733085 3 1155.784228503704 MULTI CID FTMS 0 0 0 4754 231746.78125 0.646725314607108 10 -0.0730781555175781 1 6 YTYG 4 -1 12.907 0.0 0.0 0.37268 0.0 0.0 2307.832181160623 668.3024996393186 2976.1346807999416 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YTYG 0.37268 - 31 + 1 2.22 85212.6 0.550000011920929 446 4307 4754 SUDHL4_400M_050219_2,4755 SUDHL4_400M_050219_2,4755, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4760 21.308 800.0 104140.0 25 0 17505.0 -1 0 100 437.2052506255695 436.1979741589695 1 437.2043945193291 MULTI CID FTMS 0 0 0 4759 91030.4921875 0.9375588795418316 -4 0.0285797119140625 1 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS] 4 -1 + -1.0037 0.0 0.0 -0.2301 -0.2301 0.0 0.0 0.0 0.0 1.326255652745907 1.326255652745907 1.326255652745907 -1.0037054511756327 0 0.0 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS] -0.2301 - 11 1 2.22 68720.9 0.8199999928474426 447 4311 4759 SUDHL4_400M_050219_2,4760 SUDHL4_400M_050219_2,4760, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4765 21.332 541.0 182560.0 25 0 9765.8 + 2667 ATDPSARTL 9 98 466.2458206154503 930.4770882977006 2 466.2454101443291 MULTI CID FTMS 0 0 0 4764 88347.1484375 0.5829108234355364 -11 0.0813007354736328 1 Unmodified _ATDPSARTL_ ENSG00000070669|ENST00000394308|ASNS;nc|ENSG00000070669|P08243-2|ASNS;nc|ENSG00000070669|P08243-3|ASNS 14.40537977576856 0.4467465336100671 6 [TA]DPS 5 4 34.208 0.0 0.0 3.6764 0.0 0.0 0.0 456.2577303522094 456.2577303522094 16.395196135305273 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + [TA]DPS 3.6764 + + 64 + 1 2.22 81812.5 1.0 448 4315 4764 SUDHL4_400M_050219_2,4765 SUDHL4_400M_050219_2,4765,ATDPSARTL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4770 21.358 653.0 185360.0 25 0 24034.0 + -1 MDELMELL 8 104 505.23083854844174 0 505.2306091189384 PEAK CID FTMS 0 0 0 4769 101217.1484375 0.7643014713213103 -1 0.0038890838623046 1 Oxidation (M) _M(Oxidation (M))DELMELL_ REV__ENSG00000127481|ENST00000375254|UBR4;REV__nc|ENSG00000127481|Q5T4S7-2|UBR4;REV__nc|ENSG00000127481|Q5T4S7-3|UBR4;REV__nc|ENSG00000127481|Q5T4S7-4|UBR4 5.760428011301431 0.5786759180849727 6 D 1 -1 3.4949 0.0 0.0 0.34656 0.0 0.0 820.3631225541117 70.03071771793202 890.3938402720437 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.34656 + + 7 + 1 2.22 94264.7 1.0 449 4319 4769 SUDHL4_400M_050219_2,4770 SUDHL4_400M_050219_2,4770,MDELMELL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4773 21.37 334.0 194120.0 25 0 53584.0 + 40001 VGDPGQRTL 9 67 471.7539486925943 941.4933444519886 2 471.7536804080009 MULTI CID FTMS 0 0 0 4772 140667.703125 0.7311969479683078 -8 0.0501747131347656 1 Unmodified _VGDPGQRTL_ ENSG00000117713|ENST00000324856|ARID1A;nc|ENSG00000117713|O14497-2|ARID1A;nc|ENSG00000117713|O14497-3|ARID1A 21.53697664764585 0.2571576504437394 6 [PS]S 3 8 29.437 0.0 0.0 3.1266 0.0 0.0 0.0 667.3534878448198 667.3534878448198 11.377268672201453 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [PS]S 3.1266 - 69 1 2.22 58276.6 1.0 450 4321 4772 SUDHL4_400M_050219_2,4773 SUDHL4_400M_050219_2,4773,VGDPGQRTL False True VGDPGQRTL 21.370328 471.753680408001 768991.125 4772.0 nc|ENSG00000117713|O14497-3|ARID1A;;ENSG00000117713|ENST00000324856|ARID1A;;nc|ENSG00000117713|O14497-2|ARID1A 4.871203502019246 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4774 21.384 800.0 17853.0 25 0 5711.7 -1 0 14 1182.4762730830173 3544.406989849252 3 1183.147387683392 MULTI CID FTMS 0 0 0 4772 66751.625 1.0 0 0.0 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 23860.3 0.270000010728836 451 4321 4772 SUDHL4_400M_050219_2,4774 SUDHL4_400M_050219_2,4774, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4777 21.405 800.0 159800.0 25 0 18022.0 + 18528 KYQPPPPP 8 102 462.2522614103556 0 462.2526428103447 PEAK CID FTMS 0 0 0 4776 93805.0 0.7653496326914051 13 -0.1130046844482421 1 Unmodified _KYQPPPPP_ ENSG00000131149|ENST00000253458|GSE1;nc|ENSG00000131149|Q14687-2|GSE1;nc|ENSG00000131149|Q14687-3|GSE1 40.44857923139169 0.1366842323899322 6 PPT 3 6 18.012 0.0 0.0 1.9525 0.0 0.0 516.2681814127051 108.04583154849844 624.3140129612035 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.8754223615525999 0.0 PPT 1.9525 - 21 + 1 2.22 104494.6 0.9100000262260436 452 4323 4776 SUDHL4_400M_050219_2,4777 SUDHL4_400M_050219_2,4777,KYQPPPPP False True KYQPPPPP 21.404613 462.252642810345 3878749.25 4776.0 ENSG00000131149|ENST00000253458|GSE1;;nc|ENSG00000131149|Q14687-3|GSE1;;nc|ENSG00000131149|Q14687-2|GSE1 0.2041014631589253 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4782 21.429 542.0 183700.0 25 0 34975.0 28469 PTGARSPAL 9 104 435.2458918324555 868.4772307317111 2 435.2455322146416 MULTI CID FTMS 0 0 0 4781 145077.21875 0.09584069234799 -17 0.1293773651123047 1 Unmodified _PTGARSPAL_ ENST00000546571.5_1_12:109124172-109124316:-|nuORF 23.78978130925829 0.2284941198415988 6 PT 2 7 44.776 0.0 0.0 5.1557 0.0 0.0 0.0 667.3528973271063 667.3528973271063 18.605384569831003 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + PT 5.1557 + + 88 + 1 2.22 80064.9 1.0 453 4327 4781 SUDHL4_400M_050219_2,4782 SUDHL4_400M_050219_2,4782,PTGARSPAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4787 21.457 800.0 146770.0 25 0 25475.0 + 32384 RYRPGTVALR 10 114 396.9035772112162 1187.6889022338487 3 396.9035827517509 MULTI CID FTMS 0 0 0 4786 61603.11328125 0.0717333874387475 -13 0.1010017395019531 1 Unmodified _RYRPGTVALR_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7 28.270515756011903 0.3335101494214266 6 R[YR]PGTVA{I|L}R 10 0 + 66.292 0.0 0.0 5.5816 5.5816 92.134 0.0 0.0 0.0 53.8173657553704 19.58674701179433 19.58674701179433 66.29161586377087 0 1.305462187404089 0.0 0.3807196863200844 0.3054621874040891 + + R[YR]PGTVA{I|L}R 5.5816 + + 210 + 1 2.22 96824.0 0.9100000262260436 454 4331 4786 SUDHL4_400M_050219_2,4787 SUDHL4_400M_050219_2,4787,RYRPGTVALR False True RYRPGTVALR 21.457209 396.903582751751 7432737.5 4786.0 ENSG00000275379|ENST00000616365|H3C11;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000163041|ENST00000366815|H3-3A;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000188375|ENST00000340398|H3-5 6.5628204345703125 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4789 21.474 800.0 110330.0 25 0 9267.0 + 31216 RLQEVTHSV 9 107 534.7933032958771 1067.572053658554 2 534.7933227419853 MULTI CID FTMS 0 0 0 4788 81697.1953125 0.1589665947084634 22 -0.2547035217285156 1 Unmodified _RLQEVTHSV_ ENSG00000139626|ENST00000267082|ITGB7;ENST00000549462.1_1_12:53591166-53600997:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7 36.506200033944 0.094635877243972 6 VTHSV 5 4 51.766 0.0 0.0 4.8489 0.0 0.0 526.2862175679376 0.0 526.2862175679376 0.0 38.10271477485273 0.0 0.0 0 0.9247425010840048 0.0 0.805462187404089 0.0 + VTHSV 4.8489 + + 297 1 2.22 70186.4 0.4300000071525574 455 4332 4788 SUDHL4_400M_050219_2,4789 SUDHL4_400M_050219_2,4789,RLQEVTHSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4792 21.483 138.0 356000.0 25 0 44088.0 + 17648 KPTAAFHLL 9 65 499.29322714004496 996.57190134689 2 499.2928954958916 MULTI CID FTMS 0 0 0 4791 308076.40625 0.8541184272107872 -4 0.0406723022460937 1 Unmodified _KPTAAFHLL_ REV__ENSG00000146350|ENST00000398212|TBC1D32;REV__nc|ENSG00000146350|Q96NH3-4|TBC1D32 20.453626601364224 0.2830276176381075 6 KPT 3 -1 44.693 0.0 0.0 4.4846 0.0 0.0 0.0 667.3525963487349 667.3525963487349 29.67584314246004 0.0 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 KPT 4.4846 + + 73 + 1 2.22 43645.5 1.0 456 4334 4791 SUDHL4_400M_050219_2,4792 SUDHL4_400M_050219_2,4792,KPTAAFHLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4793 21.488 298.0 170690.0 25 0 26707.0 28147 PPPSPPPPP 9 84 441.7401431015701 881.4657332699402 2 441.7398559451103 MULTI CID FTMS 0 0 0 4791 168451.671875 0.550753487948198 7 -0.0618057250976562 2 Unmodified _PPPSPPPPP_ ENSG00000100312|ENST00000216139|ACR;ENSG00000163092|ENST00000409195|XIRP2;ENSG00000171634|ENST00000306378|BPTF;ENST00000230859.7_2_5:6713434-6713641:+|nuORF;ENST00000366671.7_1_2:63282997-63283414:+|nuORF;ENST00000395348.7_1_10:61444064-61469743:-|nuORF;nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;REV__ENSG00000182580|ENST00000330394|EPHB3;REV__ENST00000366671.7_1_2:63282997-63283414:+|nuORF 78.44472497914707 0.017893573946697 6 [YK]SPP[YK] 7 6 + 45.225 0.0 0.0 5.1306 5.1306 76.741 0.0 0.0 0.0 1.3717319302531197 6.777807052660805 1.3717319302531197 1.3717319302531197 0 1.2134679910804405 0.0 1.0114393726401687 0.0 [YK]SPP[YK];{[HG]|PP}PSPP[YK];[PS][YK]P[YK];[YK]PSP[YK];{[HG]|PP}PPSP[YK];{[NV]|[RG]}[YV]P[YK] 5.1306;4.975;4.5633;3.2552;3.0996;1.2642 -;-;-;-;-;- 139 1 2.22 48043.8 1.0 457 4334 4791 SUDHL4_400M_050219_2,4793 SUDHL4_400M_050219_2,4793,PPPSPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4794 21.497 507.0 173200.0 25 0 31929.0 + -1 IQRLETMK 8 80 517.7869735658978 0 517.7864868044853 PEAK CID FTMS 0 0 0 4791 107967.4609375 0.7066949354834025 -4 0.0406723022460937 3 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.4320151646958274 6 KTEA[{I|L}P]TTG 9 -1 37.022 0.0 0.0 3.582 0.0 0.0 63.99844380455495 68.05126367740468 132.04970748195962 0.0 0.0 0.0 0.0 0 0.5 0.0 1.774227503252014 0.0 KTEA[{I|L}P]TTG 3.582 - 216 + 1 2.22 75679.9 1.0 458 4334 4791 SUDHL4_400M_050219_2,4794 SUDHL4_400M_050219_2,4794,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4797 21.511 325.0 190210.0 25 0 20719.0 5100 DHNDGLGNAF 10 82 530.2282542958646 1058.4419556585292 2 530.2281982302666 MULTI CID FTMS 0 0 0 4796 183670.046875 0.3290671197228362 11 -0.13629150390625 1 Unmodified _DHNDGLGNAF_ ENSG00000271447|ENST00000605424|MMP28 16.149105407346934 0.5765757077271437 6 [HD]EAQQNA{M(Oxidation (M))|F} 9 5 + 71.551 0.0 0.0 6.7601 6.7601 90.34 0.0 0.0 0.0 16.100067642479345 51.30814555234796 16.100067642479345 9.208187539523747 0 0.9247425010840048 1.0457574905606752 0.3252574989159953 0.0 [HD]EAQQNA{M(Oxidation (M))|F};[HD]EA[AG]QNA{M(Oxidation (M))|F};[HD]EAQ[AG]NA{M(Oxidation (M))|F};[HD]EAQQGGA{M(Oxidation (M))|F};[HD]EA[AG][AG]NA{M(Oxidation (M))|F};[HD]EA[AG]QGGA{M(Oxidation (M))|F};[HD]EAQ[AG]GGA{M(Oxidation (M))|F};[HD]Q{[CP]|[EA]}QNA{M(Oxidation (M))|F};[HD][AG]{[CP]|[EA]}QNA{M(Oxidation (M))|F};[HD]Q{[CP]|[EA]}QGGA{M(Oxidation (M))|F} 6.7601;5.8901;5.8901;5.8901;5.0242;5.0242;5.0242;4.6329;3.7629;3.7629 -;-;-;-;-;-;-;-;-;- 218 1 2.22 52433.1 1.0 459 4336 4796 SUDHL4_400M_050219_2,4797 SUDHL4_400M_050219_2,4797,DHNDGLGNAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4800 21.531 800.0 123860.0 25 0 6175.2 -1 0 58 636.7821882122964 2543.099646982785 4 636.7816039919853 MULTI CID FTMS 0 0 0 4799 50257.11328125 0.0334651724098896 -17 0.1532115936279297 1 6 DD 2 -1 18.583 0.0 0.0 0.73074 0.0 0.0 744.3313346157012 1565.6865044463182 2310.0178390620194 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 DD 0.73074 - 21 + 1 2.22 79189.4 0.3700000047683716 460 4338 4799 SUDHL4_400M_050219_2,4800 SUDHL4_400M_050219_2,4800, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4804 21.55 492.0 228120.0 25 0 51770.0 + 1068 AGHLSTAQY 9 117 474.2332581779648 946.4519634227296 2 474.2340881228447 MULTI CID FTMS 0 0 0 4803 113679.7421875 0.3755088502472148 -3 0.024332046508789 1 Unmodified _AGHLSTAQY_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 42.09456458481378 0.0639583784996157 6 [AG]H{I|L}STAQY 9 0 + 56.455 0.0 0.0 5.9649 5.9649 86.232 0.0 0.0 0.0 8.089683911513816 16.478174818886373 8.089683911513816 8.089683911513816 0 0.5 1.5228787452803376 1.0 0.0 + + [AG]H{I|L}STAQY;[HQ]{I|L}STAQY;[AG]H{I|L}STA[AG]Y;[H{I|L}]QSTAQY;[H{I|L}]GASTAQY;[HQ]{I|L}STA[AG]Y;[{I|L}T][HN]TAQY;[AG]H{I|L}A{[MG]|[TS]}QY;[H{I|L}]QSTA[AG]Y;[H{I|L}]GASTA[AG]Y 5.9649;5.1101;4.9919;4.474;4.1502;4.1315;4.1019;3.9158;3.4954;3.1773 +;-;-;-;-;-;-;-;-;- + 426 1 2.22 90245.5 1.0 461 4341 4803 SUDHL4_400M_050219_2,4804 SUDHL4_400M_050219_2,4804,AGHLSTAQY True True AGHLSTAQY 21.550494 474.234088122845 1080354.125 4803.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 6.271859645843506 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4805 21.564 800.0 157450.0 25 0 19894.0 + 24073 LYDSQCGSPFA 11 125 594.2573000951795 1186.500047257159 2 594.2574951052666 MULTI CID FTMS 0 0 0 4803 94965.6484375 0.3647101848495353 -10 0.0984172821044921 2 Unmodified _LYDSQCGSPFA_ REV__ENST00000522969.1_1_8:1808097-1817553:+|nuORF 13.042465956692816 0.7638483625850725 6 {[QG]|[NA]}G[HS]NQQ 8 -1 48.317 0.0 0.0 4.0722 0.0 0.0 0.0 347.1344859696388 347.1344859696388 19.11089237444783 0.0 0.0 0.0 0 0.0 1.2218487496163564 1.1307196863200843 1.4436726795685342 {[QG]|[NA]}G[HS]NQQ 4.0722 - 1382 1 2.22 96819.6 0.4399999976158142 462 4341 4803 SUDHL4_400M_050219_2,4805 SUDHL4_400M_050219_2,4805,LYDSQCGSPFA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4808 21.583 703.0 221840.0 25 0 13528.0 -1 0 61 509.6275025770345 2543.1011305521724 5 510.2279235720634 MULTI CID FTMS 0 0 0 4807 91643.53125 0.1425811023724645 -13 0.1315898895263672 1 6 V 1 -1 11.99 0.0 0.0 0.47146 0.0 0.0 1584.65857791721 856.3381275776537 2440.996705494864 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V 0.47146 - 32 + 1 2.22 123353.1 1.0 463 4343 4807 SUDHL4_400M_050219_2,4808 SUDHL4_400M_050219_2,4808, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4809 21.593 544.0 348600.0 25 0 20729.0 -1 0 53 509.6275025770345 2543.1011305521724 5 509.8285095095634 MULTI CID FTMS 0 0 0 4807 218153.890625 0.1448306195780253 -13 0.1315898895263672 2 6 GA 2 -1 9.464 0.0 0.0 0.37214 0.0 0.0 1832.7929996584944 579.2377413385374 2412.030740997032 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GA 0.37214 - 17 + 1 2.22 146666.7 1.0 464 4343 4807 SUDHL4_400M_050219_2,4809 SUDHL4_400M_050219_2,4809, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4810 21.607 800.0 207550.0 25 0 35309.0 -1 0 88 632.279601546093 2525.089300317972 4 632.5323974490166 MULTI CID FTMS 0 0 0 4807 68718.9921875 0.1585007760672312 -10 0.0948066711425781 3 6 D 1 -1 20.797 0.0 0.0 0.82361 0.0 0.0 1665.728960096889 741.3149112382208 2407.04387133511 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.0 D 0.82361 - 64 + 1 2.22 125980.5 0.3700000047683716 465 4343 4807 SUDHL4_400M_050219_2,4810 SUDHL4_400M_050219_2,4810, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4813 21.627 800.0 162550.0 25 0 10871.0 -1 0 53 848.7071336231925 2543.0995714697774 3 849.0421630740166 MULTI CID FTMS 0 0 0 4812 132849.0 0.3740708981966377 -10 0.1133441925048828 1 6 D 1 -1 10.485 0.0 0.0 0.41227 0.0 0.0 127.99145499017898 2297.058892927898 2425.050347918077 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 D 0.41227 - 7 + 1 2.22 95659.2 0.3799999952316284 466 4345 4812 SUDHL4_400M_050219_2,4813 SUDHL4_400M_050219_2,4813, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4814 21.634 376.0 245250.0 25 0 30190.0 + 39233 VAAAESHPL 9 102 447.7375065234578 893.4604601137156 2 448.2383911013603 MULTI CID FTMS 0 0 0 4812 123619.7109375 0.1696961506753518 -12 0.136962890625 2 Unmodified _VAAAESHPL_ ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 24.67388899826682 0.2172451872415813 6 {[VA]|[{I|L}G]}A 3 6 30.062 0.0 0.0 3.3646 0.0 0.0 0.0 649.2944957184609 649.2944957184609 23.071968632008435 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[VA]|[{I|L}G]}A 3.3646 + + 82 1 2.22 76232.5 1.0 467 4345 4812 SUDHL4_400M_050219_2,4814 SUDHL4_400M_050219_2,4814,VAAAESHPL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4817 21.654 800.0 123040.0 25 0 6482.5 12186 GQQFSSFYAHS 11 117 629.7758018974215 1257.537050861643 2 629.7765380740166 MULTI CID FTMS 0 0 0 4816 107440.03125 0.0190338956574686 -15 0.1803436279296875 1 Unmodified _GQQFSSFYAHS_ ENST00000335154.9_1_12:50036614-50037331:-|nuORF 26.268140514670165 0.4754186812857754 6 [AG]AHDEAQQNA{M(Oxidation (M))|F} 12 11 + 107.63 0.0 0.0 8.5591 8.5591 66.002 0.0 0.0 0.0 1.6896155137222024 16.611814434466197 1.6896155137222024 0.0 0 1.2396518287104437 1.6989700043360187 1.079689690656103 1.5669015600442575 [AG]AHDEAQQNA{M(Oxidation (M))|F};[AG]AHDEQAQNA{M(Oxidation (M))|F};[AG]AHDEAGAQNA{M(Oxidation (M))|F};[QA]HDEAGAQNA{M(Oxidation (M))|F};[HD]EAQAGAQNA{M(Oxidation (M))|F};[HD][QA]EAGAQNA{M(Oxidation (M))|F};[QA]HDEQAQNA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[AG]AHDEQAQGGA{M(Oxidation (M))|F};[AG]AHDEQA[AG]NA{M(Oxidation (M))|F} 8.5591;8.5591;8.5451;8.4247;8.3218;7.8654;7.8604;7.8604;7.8356;7.8356 -;-;-;-;-;-;-;-;-;- 12045 1 2.22 74865.5 0.550000011920929 468 4347 4816 SUDHL4_400M_050219_2,4817 SUDHL4_400M_050219_2,4817,GQQFSSFYAHS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4819 21.67 772.0 143590.0 25 0 18329.0 28155 PPQPPPPPP 9 108 462.25243213607456 0 462.2523681521416 PEAK CID FTMS 0 0 0 4818 64148.94140625 0.5914301642860668 9 -0.1208248138427734 1 Unmodified _PPQPPPPPP_ ENSG00000077044|ENST00000264057|DGKD;ENSG00000128652|ENST00000683222|HOXD3;ENSG00000131061|ENST00000375200|ZNF341;ENSG00000139718|ENST00000604567|SETD1B;ENSG00000148143|ENST00000277225|ZNF462;ENSG00000165556|ENST00000381020|CDX2;ENSG00000181240|ENST00000321510|SLC25A41;ENSG00000183654|ENST00000332432|MARCHF11;ENSG00000196814|ENST00000361171|MVB12B;ENSG00000198914|ENST00000361360|POU3F3;ENSG00000204612|ENST00000376708|FOXB2;ENSG00000242265|ENST00000612748|PEG10;ENST00000372441.1_1_6:43477335-43478064:-|nuORF;ENST00000482108.1_2_7:94293788-94294991:+|nuORF;ENST00000519758.5_1_X:47078159-47081683:+|nuORF;ENST00000522234.5_1_X:47078210-47085639:+|nuORF;nc|ENSG00000131061|Q9BYN7-2|ZNF341;nc|ENSG00000139718|Q9UPS6-2|SETD1B;nc|ENSG00000148143|Q96JM2-3|ZNF462;nc|ENSG00000168066|Q15637-5|SF1;nc|ENSG00000181240|Q8N5S1-2|SLC25A41;nc|ENSG00000196814|Q9H7P6-2|MVB12B;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7|PEG10;nc|ENSG00000288658|A0A7I2V3R4|RNF228;REV__ENSG00000100207|ENST00000677622|TCF20;REV__ENSG00000117523|ENST00000647382|PRRC2C;REV__ENSG00000131061|ENST00000375200|ZNF341;REV__ENSG00000165556|ENST00000381020|CDX2;REV__ENSG00000187961|ENST00000338591|KLHL17;REV__nc|ENSG00000100207|Q9UGU0-2|TCF20;REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-3|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-4|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-5|PRRC2C;REV__nc|ENSG00000117523|Q9Y520-6|PRRC2C;REV__nc|ENSG00000117523|Q9Y520|PRRC2C;REV__nc|ENSG00000131061|Q9BYN7-2|ZNF341 46.92087301778293 0.040090346589497 6 PPE 3 7 11.498 0.0 0.0 1.2465 0.0 0.0 516.2678209598461 80.05137048892811 596.3191914487742 0.0 0.0 0.0 0.0 0 0.5 0.0 0.5467716608392861 0.0 PPE 1.2465 - 23 + 1 2.22 91542.0 1.0 469 4348 4818 SUDHL4_400M_050219_2,4819 SUDHL4_400M_050219_2,4819,PPQPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4820 21.675 271.0 250360.0 25 0 32780.0 26809 PAPPPPPPP 9 70 433.7422270350796 865.4699011369593 2 433.7423889040947 MULTI CID FTMS 0 0 0 4818 158398.875 0.3965689904130518 -15 0.1803512573242187 2 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;ENSG00000103495|ENST00000322945|MAZ;ENSG00000105429|ENST00000251268|MEGF8;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139687|ENST00000267163|RB1;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000158195|ENST00000618852|WASF2;ENSG00000165821|ENST00000537235|SALL2;ENSG00000167771|ENST00000301459|RCOR2;ENSG00000169862|ENST00000304623|CTNND2;ENSG00000171634|ENST00000306378|BPTF;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000182601|ENST00000331351|HS3ST4;ENSG00000184937|ENST00000452863|WT1;ENSG00000196367|ENST00000456197|TRRAP;ENSG00000197483|ENST00000598519|ZNF628;ENSG00000205177|ENST00000379011|C11orf91;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000272333|ENST00000420124|KMT2B;ENST00000263228.3_1_9:33817570-33817774:+|nuORF;ENST00000378204.6_1_8:119123785-119123992:-|nuORF;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;ENST00000592092.1_1_19:36224173-36224410:+|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000103495|P56270-2|MAZ;nc|ENSG00000103495|P56270-3|MAZ;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000169862|Q9UQB3-2|CTNND2;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;nc|nan|Q3C1V1-2|C11orf91;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000060749|ENST00000650167|QSER1;REV__ENSG00000077420|ENST00000376236|APBB1IP;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000108819|ENST00000612501|PPP1R9B;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000112320|ENST00000317357|SOBP;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__ENSG00000126464|ENST00000418929|PRR12;REV__ENSG00000136848|ENST00000408936|DAB2IP;REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000168874|ENST00000306279|ATOH8;REV__ENSG00000171450|ENST00000302625|CDK5R2;REV__ENSG00000176058|ENST00000409012|TPRN;REV__ENSG00000176165|ENST00000313071|FOXG1;REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENSG00000182484|ENST00000359512|WASH6P;REV__ENSG00000188620|ENST00000357878|HMX3;REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENSG00000247746|ENST00000500968|USP51;REV__ENSG00000274588|ENST00000611977|DGKK;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000400706.3_1_12:88275-90926:+|nuORF;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;REV__ENST00000557932.5_1_15:102513813-102516466:+|nuORF;REV__ENST00000602719.5_1_16:85784553-85784670:-|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000168874|Q96SQ7-2|ATOH8;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6;REV__nc|ENSG00000234769|A8MWX3|WASH4P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P;REV__nc|ENSG00000292372|Q9NQA3|WASH6P 67.41302359171755 0.0220989861905124 6 [PA]PPPP[YK] 8 3 + 44.875 0.0 0.0 5.1851 5.1851 88.533 0.0 0.0 0.0 12.809702017350126 24.9097150413482 12.809702017350126 17.366618391781117 0 1.2302046884880935 1.6989700043360187 0.0 0.0 [PA]PPPP[YK];[PA][YK]P[YK];{[HG]|PP}APPP[YK];[PA]P[YK][YK];{[HG]|PP}A[YK][YK] 5.1851;3.1784;3.11;2.3333;0.25829 -;-;-;-;- 68 1 2.22 58946.5 1.0 470 4348 4818 SUDHL4_400M_050219_2,4820 SUDHL4_400M_050219_2,4820,PAPPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4822 21.68 57.0 643370.0 25 0 187380.0 + + 28554 PTGARPSAL 9 54 435.2458918324555 868.4772307317111 2 435.2456237673759 MULTI CID FTMS 0 0 0 4821 981053.3125 0.6481019522597447 5 -0.0370960235595703 1 Unmodified _PTQRSAPL_ ENST00000473611.5_1_6:33247055-33247262:-|nuORF;ENSG00000227057|ENST00000374617|WDR46 15.847184025352805 0.6768015514314958 6 PT 2 -1 45.217 0.0 0.0 5.2064 0.0 0.0 0.0 667.3536377775612 667.3536377775612 32.11758134947864 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 PT 5.2064 + + 15 + 1 2.22 32014.4 1.0 471 4349 4821 SUDHL4_400M_050219_2,4822 SUDHL4_400M_050219_2,4822,PTQRSAPL False False PTGARPSAL 21.680116 435.245623767376 6340475.0 4821.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 -0.3257826914389928 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4823 21.685 253.0 366000.0 25 0 48997.0 -1 0 45 506.025142084421 2525.089328089105 5 506.4262267947197 MULTI CID FTMS 0 0 0 4821 220563.09375 0.7635777013408769 -7 0.1104946136474609 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 2.22 82171.8 1.0 472 4349 4821 SUDHL4_400M_050219_2,4823 SUDHL4_400M_050219_2,4823, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4826 21.701 570.0 97206.0 25 0 11711.0 -1 0 87 578.2850194532286 577.2777429866286 1 578.2847167849541 MULTI CID FTMS 0 0 0 4825 152833.078125 0.7318412217139928 7 -0.1325359344482422 1 6 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[{I|L}P] 5 -1 + 25.999 0.0 0.0 4.5037 4.5037 85.702 0.0 0.0 0.0 1.4659125070036083 1.4659125070036083 1.4659125070036083 14.863070997551835 0 1.0 0.0 0.7302046884880937 0.0 {[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}[{I|L}P];[{M(Oxidation (M))|F}T]T[{I|L}P];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[DS]|[MA]|[CV]|TT} 4.5037;1.929;0.81716 -;-;- 50 1 2.22 44752.1 1.0 473 4351 4825 SUDHL4_400M_050219_2,4826 SUDHL4_400M_050219_2,4826, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4828 21.708 218.0 336850.0 25 0 84226.0 + 32385 RYRPGTVALR 10 74 396.9035772112162 1187.6889022338487 3 396.9033996462822 MULTI CID FTMS 0 0 0 4827 378613.9375 0.4408748003433073 8 -0.1321334838867187 1 Unmodified _RYRPGTVALR_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;nc|ENSG00000273213|Q5TEC6|H3-7 16.13717665003241 0.576775860688875 6 R[YR]PGTVA{I|L}R 10 0 + 68.524 0.0 0.0 5.7695 5.7695 92.652 0.0 0.0 0.0 56.53389089629101 19.146518864155126 19.146518864155126 68.5235909396512 0 1.1307196863200843 0.0 0.4247425010840047 0.2614393726401688 + + R[YR]PGTVA{I|L}R 5.7695 + + 86 + 1 2.22 63656.0 1.0 474 4352 4827 SUDHL4_400M_050219_2,4828 SUDHL4_400M_050219_2,4828,RYRPGTVALR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4832 21.732 800.0 77821.0 25 0 4150.2 -1 0 53 842.703947840323 2525.090014121169 3 843.0408813357353 MULTI CID FTMS 0 0 0 4831 41713.1484375 0.5746123482480687 1 -0.0350723266601562 1 6 D 1 -1 16.99 0.0 0.0 0.67284 0.0 0.0 1665.7259300390726 741.3120409007292 2407.037970939802 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 D 0.67284 - 5 + 1 2.22 50890.6 0.3600000143051147 475 4355 4831 SUDHL4_400M_050219_2,4832 SUDHL4_400M_050219_2,4832, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4833 21.737 262.0 242370.0 25 0 26175.0 + + 29083 IAHDTGTSL 9 83 457.73284313982975 913.4511333464596 2 457.7325012087822 MULTI CID FTMS 0 0 0 4831 187677.546875 0.7270066799550747 -1 0.0040454864501953 2 Unmodified _QELSHTSL_ ENSG00000186141|ENST00000334163|POLR3C 21.74664581756881 0.5868176546531598 6 [HV]{I|L}[WC(Carbamidomethyl (C))]S{I|L} 7 -1 + 23.261 0.0 0.0 2.5465 2.5465 75.584 0.0 0.0 0.0 3.2559818715471778 11.694247663943427 3.2559818715471778 6.632578988574803 0 0.0 0.0 0.3807196863200844 0.0 [HV]{I|L}[WC(Carbamidomethyl (C))]S{I|L};[YR]HYY{I|L} 2.5465;1.8204 -;- 101 + 1 2.22 53308.3 1.0 476 4355 4831 SUDHL4_400M_050219_2,4833 SUDHL4_400M_050219_2,4833,QELSHTSL False False IAHDTGTSL 21.737199 457.732501208782 1341096.5 4831.0 ENSG00000186141|ENST00000334163|POLR3C 5.62313445409139 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4834 21.751 800.0 85157.0 25 0 6663.4 + 2481 AQYEDIAQKS 10 114 576.7794407669127 1151.5443286006252 2 576.7792236208916 MULTI CID FTMS 0 0 0 4831 100351.96875 1.0 0 0.0 3 Unmodified _AQYEDIAQKS_ ENSG00000167768|ENST00000252244|KRT1 34.221707139014875 0.2185845369562963 6 [QA]YED{I|L}AQSK 10 2 + 46.473 0.0 0.0 4.0357 4.0357 80.95 0.0 0.0 0.0 26.37305777526978 9.91322103232929 9.91322103232929 9.164539485499256 0 0.7887254899964358 0.7958800173440752 0.2614393726401688 0.3054621874040891 [QA]YED{I|L}AQSK;[QA]YED{I|L}A[AG]SK;[QA]Y[DV][DV]QSK;[QA]YVVDDQSK;[QA]Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[HG]|PP}QSK;[QA][NP]W{[HG]|PP}QSK;[QA]YVVAHH{NN|[MP]|[D{I|L}]|[EV]} 4.0357;3.2398;2.0533;1.8607;1.639;1.1269;0.3426 -;-;-;-;-;-;- 228 + 1 2.22 56464.1 0.4900000095367431 477 4355 4831 SUDHL4_400M_050219_2,4834 SUDHL4_400M_050219_2,4834,AQYEDIAQKS False True AQYEDIAQKS 21.75103 576.779223620892 440572.90625 4831.0 ENSG00000167768|ENST00000252244|KRT1 3.2417718966801963 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4836 21.763 485.0 174450.0 25 0 24576.0 34659 SPPPPPPPP 9 85 441.74003702865895 881.4655211241179 2 441.7393981814384 MULTI CID FTMS 0 0 0 4835 141252.0625 0.5473420332805737 12 -0.1988143920898437 1 Unmodified _SPPPPPPPP_ ENSG00000099999|ENST00000382363|RNF215;ENSG00000100312|ENST00000216139|ACR;ENSG00000103479|ENST00000262133|RBL2;ENSG00000107816|ENST00000454422|LZTS2;ENSG00000109920|ENST00000263773|FNBP4;ENSG00000120549|ENST00000376454|KIAA1217;ENSG00000126461|ENST00000360565|SCAF1;ENSG00000127666|ENST00000248244|TICAM1;ENSG00000136754|ENST00000376140|ABI1;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139800|ENST00000267294|ZIC5;ENSG00000164944|ENST00000297591|VIRMA;ENSG00000184863|ENST00000401878|RBM33;ENSG00000260428|ENST00000567180|SCX;ENSG00000274209|ENST00000620264|ANTXRL;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;ENST00000471339.1_1_5:173036657-173043649:-|nuORF;ENST00000587013.5_1_19:38882703-38882923:+|nuORF;nc|ENSG00000109920|Q8N3X1-2|FNBP4;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000136754|Q8IZP0-10|ABI1;nc|ENSG00000136754|Q8IZP0-11|ABI1;nc|ENSG00000136754|Q8IZP0-12|ABI1;nc|ENSG00000136754|Q8IZP0-2|ABI1;nc|ENSG00000136754|Q8IZP0-3|ABI1;nc|ENSG00000136754|Q8IZP0-4|ABI1;nc|ENSG00000136754|Q8IZP0-5|ABI1;nc|ENSG00000136754|Q8IZP0-6|ABI1;nc|ENSG00000136754|Q8IZP0-7|ABI1;nc|ENSG00000136754|Q8IZP0-8|ABI1;nc|ENSG00000136754|Q8IZP0|ABI1;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000015285|ENST00000376701|WAS;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000091656|ENST00000651372|ZFHX4;REV__ENSG00000099999|ENST00000382363|RNF215;REV__ENSG00000100201|ENST00000403230|DDX17;REV__ENSG00000107816|ENST00000454422|LZTS2;REV__ENSG00000112541|ENST00000539869|PDE10A;REV__ENSG00000127666|ENST00000248244|TICAM1;REV__ENSG00000137460|ENST00000511601|FHDC1;REV__ENSG00000138771|ENST00000296043|SHROOM3;REV__ENSG00000139218|ENST00000369367|SCAF11;REV__ENSG00000141867|ENST00000679869|BRD4;REV__ENSG00000143006|ENST00000371445|DMRTB1;REV__ENSG00000148143|ENST00000277225|ZNF462;REV__ENSG00000169992|ENST00000302926|NLGN2;REV__ENSG00000170807|ENST00000458573|LMOD2;REV__ENSG00000204334|ENST00000697325|ERICH2;REV__ENSG00000242265|ENST00000612748|PEG10;REV__ENST00000216019.11_1_22:38881942-38884127:-|nuORF;REV__ENST00000247087.9_1_1:27875205-27875379:-|nuORF;REV__ENST00000361272.8_2_8:17102747-17104366:-|nuORF;REV__ENST00000431312.2_1_22:38881942-38884127:-|nuORF;REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF;REV__ENST00000482108.1_2_7:94293788-94294991:+|nuORF;REV__ENST00000508096.1_1_10:126605730-126631034:+|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000091656|Q86UP3-2|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3-4|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000091656|Q86UP3|ZFHX4;REV__nc|ENSG00000100201|Q92841-1|DDX17;REV__nc|ENSG00000100201|Q92841-2|DDX17;REV__nc|ENSG00000100201|Q92841-3|DDX17;REV__nc|ENSG00000139218|Q99590-2|SCAF11;REV__nc|ENSG00000148143|Q96JM2-3|ZNF462;REV__nc|ENSG00000168066|Q15637-5|SF1;REV__nc|ENSG00000242265|Q86TG7-4|PEG10;REV__nc|ENSG00000242265|Q86TG7|PEG10 81.86404211737425 0.017065112157077 6 [PS]PPPP[YK] 8 3 + 63.554 0.0 0.0 7.2101 7.2101 95.001 0.0 0.0 0.0 20.66946789630613 50.36683765109139 20.66946789630613 21.714949549306084 0 1.1989700043360187 2.0 1.2971062485323517 0.0 [PS]PPPP[YK];[PS][YK]P[YK];{[HG]|PP}SPPP[YK];[PS]P[YK][YK];{[NV]|[RG]}[YV]P[YK];{[HG]|PP}S[YK][YK] 7.2101;4.7466;4.6654;3.6526;1.2477;1.1079 -;-;-;-;-;- 173 1 2.22 71640.3 1.0 478 4356 4835 SUDHL4_400M_050219_2,4836 SUDHL4_400M_050219_2,4836,SPPPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4837 21.775 647.0 147930.0 25 0 44039.0 + 32160 RVQVVGTYR 9 100 539.3120761808151 1076.60959942843 2 539.3116332888603 MULTI CID FTMS 0 0 0 4835 109433.828125 1.0 0 0.0 2 Unmodified _RVQVVGTYR_ ENSG00000112118|ENST00000596288|MCM3;nc|ENSG00000112118|P25205-2|MCM3 24.99096001346401 0.2132109383330889 6 YR 2 7 33.126 0.0 0.0 3.0769 0.0 0.0 739.4355099282333 0.0 739.4355099282333 0.0 14.185552236249649 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.7887254899964358 + YR 3.0769 + + 27 + 1 2.22 80603.1 1.0 479 4356 4835 SUDHL4_400M_050219_2,4837 SUDHL4_400M_050219_2,4837,RVQVVGTYR False True RVQVVGTYR 21.774755 539.31163328886 460710.65625 4835.0 ENSG00000112118|ENST00000596288|MCM3;;nc|ENSG00000112118|P25205-2|MCM3 0.4101129372914632 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4839 21.78 52.0 2666500.0 25 0 153250.0 -1 0 69 636.7821882122964 2543.099646982785 4 637.0334960818291 MULTI CID FTMS 0 0 0 4838 1605413.25 0.8262291627049183 1 -0.0466480255126953 1 6 D 1 -1 20.242 0.0 0.0 0.79597 0.0 0.0 1683.7397579303222 741.3106476716457 2425.050405601968 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3252574989159953 0.0 D 0.79597 - 11 + 1 2.22 105723.6 1.0 480 4357 4838 SUDHL4_400M_050219_2,4839 SUDHL4_400M_050219_2,4839, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4840 21.794 800.0 120370.0 25 0 6673.2 + 6755 EDTEEPNQPGE 11 117 622.7492944118397 1243.4840358904794 2 622.7495605349541 MULTI CID FTMS 0 0 0 4838 91253.6953125 0.3420048649393153 -5 0.0733528137207031 2 Unmodified _EDTEEPNQPGE_ REV__ENSG00000092853|ENST00000318121|CLSPN;REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN;REV__nc|ENSG00000092853|Q9HAW4-3|CLSPN 59.36838082759317 0.0717085717264091 6 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TEEVE[HS]T 10 -1 64.017 0.0 0.0 5.1482 0.0 0.0 0.0 84.00975977115468 84.00975977115468 -6.615037852477684 0.0 -6.615037852477684 0.0 0 1.3324385367314688 0.0 1.829689690656103 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TEEVE[HS]T 5.1482 - 8975 + 1 2.22 73804.6 0.4399999976158142 481 4357 4838 SUDHL4_400M_050219_2,4840 SUDHL4_400M_050219_2,4840,EDTEEPNQPGE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4841 21.808 800.0 99599.0 25 0 8954.2 + 31387 RNVSTGDVNVE 11 97 595.2938971258304 1188.5732413184608 2 595.2937499880791 MULTI CID FTMS 0 0 0 4838 108299.171875 0.8628466438703708 -1 0.0237236022949218 3 Unmodified _RNVSTGDVNVE_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 28.181266145913348 0.4304979014012044 6 {[NV]|[RG]}RSTGDVNVE 11 2 + 61.949 0.0 0.0 5.212 5.212 81.306 0.0 0.0 0.0 4.8550201325557865 5.862435673934279 4.8550201325557865 4.8550201325557865 0 1.325257498915995 0.0 0.0 0.3807196863200844 {[NV]|[RG]}RSTGDVNVE;[KG]RDTGDVNVE;{[NV]|[RG]}RSTGDVGGVE;{[NV]|[RG]}RSWWNVE;[VS][RN]TGDVNVE;[KG]RDTGDVGGVE;[KG]RDWWNVE;[KG][VS]WGDVNVE;{M(Oxidation (M))|F}VNVD[DV][RP]E;[VS][KG]WGDVNVE 5.212;4.8036;4.444;4.3045;4.134;4.0355;3.8961;3.8141;3.6317;3.6274 -;-;-;-;-;-;-;-;-;- 538 1 2.22 68504.2 0.4799999892711639 482 4357 4838 SUDHL4_400M_050219_2,4841 SUDHL4_400M_050219_2,4841,RNVSTGDVNVE False True RNVSTGDVNVE 21.80754 595.293749988079 517851.34375 4838.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 8.528683503468832 2.0 True 11.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_2 4842 21.821 800.0 79739.0 25 0 23945.0 -1 0 36 1057.770876809297 3170.290801028092 3 1058.106494128704 MULTI CID FTMS 0 0 0 4838 93492.84375 0.3335856602491112 -6 0.0858879089355468 4 6 E 1 -1 6.9897 0.0 0.0 0.22048 0.0 0.0 2514.062115580629 524.1599825494749 3038.222098130104 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.22048 - 3 + 1 2.22 69396.5 0.3600000143051147 483 4357 4838 SUDHL4_400M_050219_2,4842 SUDHL4_400M_050219_2,4842, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4845 21.834 304.0 133100.0 25 0 12446.0 -1 SQGFSHSQM 9 79 512.7112106647855 1023.4078683963712 2 512.7114135622978 MULTI CID FTMS 0 0 0 4844 153792.953125 0.5870989777011819 -4 0.109466552734375 1 Oxidation (M) _SQGFSHSQM(Oxidation (M))_ ENSG00000181143|ENST00000397910|MUC16;ENSG00000181143|ENST00000397910|MUC16 38.61474834105838 0.0830609365873449 6 {[QS]|[NT]}HYQTN{M(Oxidation (M))|F} 8 -1 + 46.279 0.0 0.0 4.5221 4.5221 76.084 0.0 0.0 0.0 5.422881389671659 5.422881389671659 5.422881389671659 2.272437815030628 0 1.242992819099939 1.0969100130080565 0.0 0.3494850021680094 {[QS]|[NT]}HYQTN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}QTN{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HSQ{M(Oxidation (M))|F};{[QS]|[NT]}HY[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]TN{M(Oxidation (M))|F};{[QS]|[NT]}G[MN]{[QV]|[N{I|L}]|[RA]|[KV]}N{M(Oxidation (M))|F};{[QS]|[NT]}[YQ]HS[AG]{M(Oxidation (M))|F};{[QS]|[NT]}{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}Q{M(Oxidation (M))|F};[HS]QYQTN{M(Oxidation (M))|F};[VP][EC]SQTN{M(Oxidation (M))|F} 4.5221;4.3;3.9922;3.6171;3.4003;2.7632;2.7152;2.3333;1.8599;1.793 -;-;-;-;-;-;-;-;-;- 161 1 2.22 35164.7 1.0 484 4359 4844 SUDHL4_400M_050219_2,4845 SUDHL4_400M_050219_2,4845,SQGFSHSQM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4847 21.839 84.0 814020.0 25 0 51374.0 -1 0 36 509.6275025770345 2543.1011305521724 5 509.8282348513603 MULTI CID FTMS 0 0 0 4846 569768.375 0.3782646577184538 4 -0.0956745147705078 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 60462.6 1.0 485 4360 4846 SUDHL4_400M_050219_2,4847 SUDHL4_400M_050219_2,4847, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4849 21.848 352.0 300950.0 25 0 29781.0 -1 0 60 632.279601546093 2525.089300317972 4 632.5302612185478 MULTI CID FTMS 0 0 0 4848 182985.296875 0.4220567071828492 8 -0.1146163940429687 1 6 WWT[RD]D 6 -1 23.958 0.0 0.0 0.94878 0.0 0.0 0.0 1662.7052819136768 1662.7052819136768 16.100840614449794 0.0 0.0 0.0 0 1.0 0.0 0.3807196863200844 0.3494850021680094 WWT[RD]D 0.94878 - 29 1 2.22 85922.5 1.0 486 4361 4848 SUDHL4_400M_050219_2,4849 SUDHL4_400M_050219_2,4849, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4850 21.854 293.0 323300.0 25 0 40181.0 + 12542 GVGPVPARA 9 100 412.2429889046579 822.4714248761159 2 412.2422668337822 MULTI CID FTMS 0 0 0 4848 160606.03125 0.1217218725555053 -13 0.1853580474853515 2 Unmodified _GVGPVPARA_ ENSG00000129636|ENST00000320640|ITFG1 34.10243960390752 0.1078313939113124 6 [VG]GPVA 6 3 53.293 0.0 0.0 6.4797 0.0 0.0 0.0 339.1789644830688 339.1789644830688 29.64816749052117 0.0 0.0 0.0 0 0.6382104921644451 2.0 0.0 0.0 [VG]GPVA 6.4797 - 288 + 1 2.22 81938.4 1.0 487 4361 4848 SUDHL4_400M_050219_2,4850 SUDHL4_400M_050219_2,4850,GVGPVPARA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4851 21.862 499.0 185460.0 25 0 24546.0 + 18596 LADPSAKAV 9 101 436.2480645156896 870.4815760981793 2 436.2478210330009 MULTI CID FTMS 0 0 0 4848 142402.28125 0.3173779546067924 -9 0.1378860473632812 3 Unmodified _LADPSAKAV_ ENSG00000107854|ENST00000371627|TNKS2;ENSG00000173273|ENST00000310430|TNKS;nc|ENSG00000173273|O95271-2|TNKS 34.40172386719151 0.1061884637610825 6 [{I|L}A]DPSAKAV 9 0 + 47.33 0.0 0.0 5.4372 5.4372 78.818 0.0 0.0 0.0 9.882287586051106 1.9188552623891293 1.9188552623891293 1.9188552623891293 0 0.9247425010840048 2.0 0.0 0.0 + + [{I|L}A]DPSAKAV;[{I|L}A]DPSAKG{I|L};[{I|L}A]DPS[KQ]{I|L} 5.4372;5.2167;4.1589 +;-;- + 364 + 1 2.22 74846.0 1.0 488 4361 4848 SUDHL4_400M_050219_2,4851 SUDHL4_400M_050219_2,4851,LADPSAKAV True True LADPSAKAV 21.862363 436.247821033001 4659084.0 4848.0 ENSG00000107854|ENST00000371627|TNKS2;;ENSG00000173273|ENST00000310430|TNKS;;nc|ENSG00000173273|O95271-2|TNKS 6.163574934005737 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4853 21.874 545.0 125770.0 25 0 22333.0 + 35042 SQRPPTRETF 10 83 406.8805233713816 1217.6197407143447 3 406.8788024783134 MULTI CID FTMS 0 0 0 4852 71081.4140625 0.6619750681661621 1 -0.0259380340576171 1 Unmodified _SQRPPTRETF_ ENSG00000155629|ENST00000339364|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1 28.23362336080872 0.3343390635154222 6 SQRPP[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{I|L}Q 10 5 + 69.836 0.0 0.0 5.7354 5.7354 83.197 0.0 0.0 0.0 51.296452113213874 11.840905095085205 11.840905095085205 5.044321917401078 0 0.9291746928241128 0.0 0.0 1.0189301784845295 SQRPP[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{I|L}Q;SQRPP[YT]E{I|L}Q;SQ[VG]PP[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{I|L}Q;S[AG]RPP[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{I|L}Q;SQRPP[{M(Oxidation (M))|F}V][Q{I|L}]{M(Oxidation (M))|F};S[AG]RPP[YT]E{I|L}Q;SQRPP[MD][K{I|L}]{M(Oxidation (M))|F};SQRPP[{M(Oxidation (M))|F}V][YK]P 5.7354;5.3211;4.9828;4.9828;4.5974;4.5685;4.51;4.2366 -;-;-;-;-;-;-;- 174 + 1 2.22 58394.3 1.0 489 4362 4852 SUDHL4_400M_050219_2,4853 SUDHL4_400M_050219_2,4853,SQRPPTRETF False True SQRPPTRETF 21.874462 406.878802478313 592647.625 4852.0 nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1;;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;;ENSG00000155629|ENST00000339364|PIK3AP1 7.507735411326091 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4854 21.888 800.0 150390.0 25 0 28862.0 19004 LDISPRKPK 9 94 527.3244870193539 1052.6344211055075 2 527.3243286013603 MULTI CID FTMS 0 0 0 4852 102685.8359375 0.9077689958436987 -2 0.0288295745849609 2 Unmodified _LDISPRKPK_ ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-2|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-5|OTOF 10.823927491677226 0.5436922275383211 6 KPTQ 4 8 25.433 0.0 0.0 2.4161 0.0 0.0 56.063000683459286 539.2962740533811 595.3592747368405 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.4247425010840047 KPTQ 2.4161 - 106 + 1 2.22 97923.4 0.4799999892711639 490 4362 4852 SUDHL4_400M_050219_2,4854 SUDHL4_400M_050219_2,4854,LDISPRKPK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4856 21.893 59.0 741950.0 25 0 103120.0 + 39234 VAAAESHPL 9 69 447.7375065234578 893.4604601137156 2 447.7375060915947 MULTI CID FTMS 0 0 0 4855 836783.625 0.5858012522901904 6 -0.0656013488769531 1 Unmodified _VAAAESHPL_ ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 36.04419817259434 0.0971720506436186 6 {[VA]|[{I|L}G]}AAESH[{I|L}P] 9 0 + 56.577 0.0 0.0 6.3323 6.3323 93.893 0.0 0.0 0.0 30.89033289338617 7.147642715192504 7.147642715192504 40.9568378181978 0 0.8494850021680094 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}AAESH[{I|L}P];{[VA]|[{I|L}G]}[KG]YY{[HG]|PP} 6.3323;1.7483 +;- + 112 + 1 2.22 44820.0 1.0 491 4363 4855 SUDHL4_400M_050219_2,4856 SUDHL4_400M_050219_2,4856,VAAAESHPL True True VAAAESHPL 21.893087 447.737506091595 14365615.0 4855.0 ENST00000416120.1_1_6:64259201-64259360:-|nuORF;;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 4.575419267018636 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4857 21.907 800.0 78379.0 25 0 3945.5 -1 0 47 848.7071336231925 2543.0995714697774 3 849.0424682497978 MULTI CID FTMS 0 0 0 4855 70739.953125 0.1991867293231924 8 -0.0735397338867187 2 6 D 1 -1 10.797 0.0 0.0 0.42456 0.0 0.0 63.99615392689004 2361.052419990308 2425.048573917198 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 D 0.42456 - 10 + 1 2.22 52294.0 0.4399999976158142 492 4363 4855 SUDHL4_400M_050219_2,4857 SUDHL4_400M_050219_2,4857, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4858 21.92 748.0 92357.0 25 0 11355.0 + 30517 REIESSPQY 9 83 554.7668326956431 1107.519112458086 2 554.7666503787041 MULTI CID FTMS 0 0 0 4855 91617.609375 0.7416301381618902 -9 0.1763896942138672 3 Unmodified _REIESSPQY_ ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;ENSG00000168488|ENST00000336783|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ENST00000564284.1_1_16:28841101-28842119:+|nuORF;ENST00000570284.1_1_16:28840745-28842349:+|nuORF;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L 43.77239144664712 0.0547478964384323 6 ESSPQY 6 3 38.862 0.0 0.0 3.5089 0.0 0.0 398.2277699201188 0.0 398.2277699201188 0.0 21.05774396488272 0.0 0.0 0 1.048455006504028 0.0 0.7742275032520141 0.0 + ESSPQY 3.5089 + + 196 1 2.22 61927.1 1.0 493 4363 4855 SUDHL4_400M_050219_2,4858 SUDHL4_400M_050219_2,4858,REIESSPQY True True REIESSPQY 21.919894 554.766650378704 624138.9375 4855.0 ENST00000564284.1_1_16:28841101-28842119:+|nuORF;;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;;ENST00000570284.1_1_16:28840745-28842349:+|nuORF;;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;;ATXN2L|p.S763Afs*262|1|0.57|ENSG00000168488|chr16:28834547-28834563|TCAGCCCCGCCGATGAT/-|frameshift_variant;;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;;nc|ENSG00000168488|Q8WWM7-3|ATXN2L;;ENSG00000168488|ENST00000336783|ATXN2L;;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;;nc|ENSG00000168488|Q8WWM7-5|ATXN2L 7.589925924936931 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4859 21.929 529.0 179240.0 25 0 13337.0 + 35017 SQPYGQQSY 9 108 529.2329544002242 1056.4513558672484 2 529.2321044802666 MULTI CID FTMS 0 0 0 4855 113558.1328125 0.1325899539215771 -20 0.3199176788330078 4 Unmodified _SQPYGQQSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 75.76082778847304 0.0188720312721366 6 {[QS]|[NT]}{[ET]|[MV]}QSY{[QS]|[NT]} 9 6 + 49.354 0.0 0.0 4.6716 4.6716 73.488 0.0 0.0 0.0 0.3689310708045923 4.762036441594191 0.3689310708045923 0.3689310708045923 0 0.8494850021680094 0.9208187539523752 0.6989700043360187 0.930884548956689 {[QS]|[NT]}{[ET]|[MV]}QSY{[QS]|[NT]};{[QS]|[NT]}[QA][{M(Oxidation (M))|F}V]QSY;[AG]S{[ET]|[MV]}QSY{[QS]|[NT]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQQSY{[QS]|[NT]};{[QS]|[NT]}{[QG]|[NA]}YPY{[QS]|[NT]};{[QS]|[NT]}{[ET]|[MV]}SQY{[QS]|[NT]};[AG]GYPQSY{[QS]|[NT]};{[QS]|[NT]}PTS[C(Carbamidomethyl (C))K]SY;[AG]S{[QG]|[NA]}YPY{[QS]|[NT]};{[QS]|[NT]}{[ET]|[MV]}[AG]SY{[QS]|[NT]} 4.6716;4.6367;4.4726;4.4014;4.0005;3.9825;3.8315;3.8084;3.8015;3.8 -;-;-;-;-;-;-;-;-;- 1405 1 2.22 76700.1 1.0 494 4363 4855 SUDHL4_400M_050219_2,4859 SUDHL4_400M_050219_2,4859,SQPYGQQSY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4861 21.934 12.0 2597700.0 25 0 175240.0 + -1 CLCFAPCIAF 10 64 629.7758018974215 1257.537050861643 2 629.7762939333916 MULTI CID FTMS 0 0 0 4860 4448673.0 0.7881194440382105 2 -0.0088272094726562 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 12.531546534597751 0.6372748319968624 6 [QA]HDEAQNQA{M(Oxidation (M))|F} 11 -1 + 51.987 0.0 0.0 4.134 4.134 75.891 0.0 0.0 0.0 4.552593986562812 18.92326815330007 4.552593986562812 3.0102999566398125 0 0.8182503180159344 0.0 0.0 0.2614393726401688 [QA]HDEAQNQA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[HD][QA]EAQNQA{M(Oxidation (M))|F};[HD][QA]EAQQNA{M(Oxidation (M))|F};[QA]HDEA[AG]NQA{M(Oxidation (M))|F};[QA]HDEAQGGQA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]SAQNQA{M(Oxidation (M))|F};[HD]{[CP]|[EA]}QAQNQA{M(Oxidation (M))|F};[QA]HDEA[AG]QNA{M(Oxidation (M))|F};[QA]HDEAQ[AG]NA{M(Oxidation (M))|F} 4.134;3.8946;3.772;3.5326;3.4081;3.4081;3.3856;3.2932;3.1687;3.1687 -;-;-;-;-;-;-;-;-;- 315 1 2.22 29833.4 1.0 495 4364 4860 SUDHL4_400M_050219_2,4861 SUDHL4_400M_050219_2,4861,CLCFAPCIAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4865 21.95 284.0 277530.0 25 0 71081.0 -1 0 67 497.25243398227286 496.2451575156729 1 497.2522460818291 MULTI CID FTMS 0 0 0 4864 229447.265625 0.0876908131551928 13 -0.0874786376953125 1 6 {I|L} 1 -1 16.99 0.0 0.0 3.4237 0.0 0.0 365.1502916482885 0.0 365.1502916482885 0.0 6.1522446068913705 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 3.4237 - 6 + 1 2.22 63575.0 1.0 496 4367 4864 SUDHL4_400M_050219_2,4865 SUDHL4_400M_050219_2,4865, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4870 21.978 800.0 143720.0 25 0 12721.0 -1 EKGKQILMK 9 82 545.8183634745656 1089.622174015931 2 545.8181030154228 MULTI CID FTMS 0 0 0 4869 70733.3125 0.2499520186509963 -13 0.1404399871826172 1 Oxidation (M) _EKGKQILM(Oxidation (M))K_ ENSG00000198515|ENST00000514170|CNGA1 6.723162845929126 0.6799819581413107 6 T{M(Oxidation (M))|F}K 3 -1 25.054 0.0 0.0 2.2994 0.0 0.0 695.4341685001092 0.0 695.4341685001092 0.0 0.1327175555614523 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.2134679910804404 T{M(Oxidation (M))|F}K 2.2994 - 95 + 1 2.22 94516.2 0.4799999892711639 497 4371 4869 SUDHL4_400M_050219_2,4870 SUDHL4_400M_050219_2,4870,EKGKQILMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4874 21.992 179.0 221110.0 25 0 11931.0 + 35564 STQMTITTQK 10 73 577.7893893037437 1153.5642256742874 2 577.7897216677666 MULTI CID FTMS 0 0 0 4873 291649.71875 0.6454314971814904 7 -0.0596065521240234 1 Oxidation (M) _STQM(Oxidation (M))TITTQK_ ENSG00000181143|ENST00000397910|MUC16 61.08992128646608 0.0337271188422265 6 {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK 10 0 + 68.751 0.0 0.0 5.9599 5.9599 87.051 0.0 0.0 0.0 5.764837301042711 9.652055486284349 5.764837301042711 9.16453948549924 0 0.7302046884880937 0.0 0.3054621874040891 1.1050541008457977 + + {[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TTQK;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T{M(Oxidation (M))|F}{I|L}P;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}TT[AG]K;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T{M(Oxidation (M))|F}{I|L}P;{[MG]|[TS]}Q{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}[AG]{M(Oxidation (M))|F}T{I|L}T[KS]AA;{[MG]|[TS]}Q{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[WY]{I|L}P 5.9599;5.1655;5.1655;5.1232;4.3741;3.8953;3.7403;2.949;1.3022 +;-;-;-;-;-;-;-;- + 183 + 1 2.22 34654.0 1.0 498 4374 4873 SUDHL4_400M_050219_2,4874 SUDHL4_400M_050219_2,4874,STQMTITTQK True False STQMTITTQK 21.992372 577.789721667767 4821200.5 4873.0 ENSG00000181143|ENST00000397910|MUC16 11.06463368733724 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4875 22.006 800.0 36281.0 25 0 12230.0 -1 0 31 1129.783338711448 3386.328186734544 3 1130.118090808392 MULTI CID FTMS 0 0 0 4873 38210.34765625 0.2130258544467819 -13 0.1470661163330078 2 6 {I|L}W 2 -1 9.464 0.0 0.0 0.27948 0.0 0.0 2262.814458163758 821.3457735650999 3084.160231728858 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}W 0.27948 - 27 + 1 2.22 36323.1 0.3300000131130218 499 4374 4873 SUDHL4_400M_050219_2,4875 SUDHL4_400M_050219_2,4875, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4881 22.03 242.0 316310.0 25 0 65416.0 -1 0 90 382.6860795704571 763.3576062077142 2 382.6859619021416 MULTI CID FTMS 0 0 0 4880 174845.390625 0.6795308111499576 17 -0.1240711212158203 1 6 [{M(Oxidation (M))|F}E]P{M(Oxidation (M))|F}PK 6 -1 + 26.929 0.0 0.0 3.5276 3.5276 84.474 0.0 0.0 0.0 19.16436201540624 13.728721920568244 13.728721920568244 26.928571858695136 0 0.2742275032520141 0.0 0.0 0.2302046884880938 [{M(Oxidation (M))|F}E]P{M(Oxidation (M))|F}PK 3.5276 - 24 + 1 2.22 65277.3 1.0 500 4379 4880 SUDHL4_400M_050219_2,4881 SUDHL4_400M_050219_2,4881, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4883 22.042 567.0 125130.0 25 0 6272.8 -1 0 66 636.7821882122964 2543.099646982785 4 636.7830688357353 MULTI CID FTMS 0 0 0 4882 57528.5625 0.0383070800700738 25 -0.1544342041015625 1 6 DD 2 -1 20.217 0.0 0.0 0.79496 0.0 0.0 744.3290625823498 1565.6936296390893 2310.0226922214392 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 DD 0.79496 - 123 + 1 2.22 60114.6 1.0 501 4380 4882 SUDHL4_400M_050219_2,4883 SUDHL4_400M_050219_2,4883, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4884 22.046 204.0 373750.0 25 0 49836.0 26810 PAPPPPPPP 9 86 433.7422270350796 865.4699011369593 2 433.7420532107353 MULTI CID FTMS 0 0 0 4882 281352.8125 0.7043976846615714 17 -0.1210594177246093 2 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;ENSG00000103495|ENST00000322945|MAZ;ENSG00000105429|ENST00000251268|MEGF8;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000139687|ENST00000267163|RB1;ENSG00000142235|ENST00000600059|LMTK3;ENSG00000158195|ENST00000618852|WASF2;ENSG00000165821|ENST00000537235|SALL2;ENSG00000167771|ENST00000301459|RCOR2;ENSG00000169862|ENST00000304623|CTNND2;ENSG00000171634|ENST00000306378|BPTF;ENSG00000173166|ENST00000319170|RAPH1;ENSG00000182601|ENST00000331351|HS3ST4;ENSG00000184937|ENST00000452863|WT1;ENSG00000196367|ENST00000456197|TRRAP;ENSG00000197483|ENST00000598519|ZNF628;ENSG00000205177|ENST00000379011|C11orf91;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000272333|ENST00000420124|KMT2B;ENST00000263228.3_1_9:33817570-33817774:+|nuORF;ENST00000378204.6_1_8:119123785-119123992:-|nuORF;ENST00000525036.1_1_13:48877982-48934322:+|nuORF;ENST00000592092.1_1_19:36224173-36224410:+|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;nc|ENSG00000103495|P56270-2|MAZ;nc|ENSG00000103495|P56270-3|MAZ;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000169862|Q9UQB3-2|CTNND2;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000171634|Q12830|BPTF;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;nc|nan|Q3C1V1-2|C11orf91;REV__ENSG00000005483|ENST00000311117|KMT2E;REV__ENSG00000060749|ENST00000650167|QSER1;REV__ENSG00000077420|ENST00000376236|APBB1IP;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000099822|ENST00000251287|HCN2;REV__ENSG00000108819|ENST00000612501|PPP1R9B;REV__ENSG00000109920|ENST00000263773|FNBP4;REV__ENSG00000112320|ENST00000317357|SOBP;REV__ENSG00000126461|ENST00000360565|SCAF1;REV__ENSG00000126464|ENST00000418929|PRR12;REV__ENSG00000136848|ENST00000408936|DAB2IP;REV__ENSG00000139613|ENST00000550164|SMARCC2;REV__ENSG00000154380|ENST00000366843|ENAH;REV__ENSG00000168874|ENST00000306279|ATOH8;REV__ENSG00000171450|ENST00000302625|CDK5R2;REV__ENSG00000176058|ENST00000409012|TPRN;REV__ENSG00000176165|ENST00000313071|FOXG1;REV__ENSG00000181404|ENST00000696149|WASHC1;REV__ENSG00000182484|ENST00000359512|WASH6P;REV__ENSG00000188620|ENST00000357878|HMX3;REV__ENSG00000204463|ENST00000676615|BAG6;REV__ENSG00000247746|ENST00000500968|USP51;REV__ENSG00000274588|ENST00000611977|DGKK;REV__ENST00000360947.7_1_14:21561312-21566652:-|nuORF;REV__ENST00000400706.3_1_12:88275-90926:+|nuORF;REV__ENST00000403681.6_2_12:66218024-66218900:+|nuORF;REV__ENST00000557932.5_1_15:102513813-102516466:+|nuORF;REV__ENST00000602719.5_1_16:85784553-85784670:-|nuORF;REV__nc|ENSG00000005483|Q8IZD2-2|KMT2E;REV__nc|ENSG00000005483|Q8IZD2-7|KMT2E;REV__nc|ENSG00000109920|Q8N3X1-2|FNBP4;REV__nc|ENSG00000126464|Q9ULL5-2|PRR12;REV__nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;REV__nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;REV__nc|ENSG00000139613|Q8TAQ2|SMARCC2;REV__nc|ENSG00000154380|Q8N8S7-3|ENAH;REV__nc|ENSG00000154380|Q8N8S7|ENAH;REV__nc|ENSG00000168874|Q96SQ7-2|ATOH8;REV__nc|ENSG00000185596|C4AMC7|WASH3P;REV__nc|ENSG00000204463|P46379-2|BAG6;REV__nc|ENSG00000204463|P46379-5|BAG6;REV__nc|ENSG00000204463|P46379|BAG6;REV__nc|ENSG00000234769|A8MWX3|WASH4P;REV__nc|ENSG00000291134|Q6VEQ5|WASH2P;REV__nc|ENSG00000292372|Q9NQA3|WASH6P 67.41302359171755 0.0220989861905124 6 [PA]PPPP[YK] 8 3 + 45.947 0.0 0.0 5.3089 5.3089 88.864 0.0 0.0 0.0 14.259687322722812 18.78022170376731 14.259687322722812 16.989700043360187 0 1.2302046884880935 1.6989700043360187 0.0 0.0 [PA]PPPP[YK];{[HG]|PP}APPP[YK];[YK]APP[YK];[PA][YK]P[YK];{[HG]|PP}PAPP[YK];[PA]P[YK][YK];[YK]PAP[YK];{[HG]|PP}PPAP[YK];{[NV]|[RG]}[{M(Oxidation (M))|F}V]P[YK];{[HG]|PP}A[YK][YK] 5.3089;3.3459;3.1179;3.0665;3.0509;2.4572;1.6507;1.5837;0.75559;0.49413 -;-;-;-;-;-;-;-;-;- 137 1 2.22 64366.8 1.0 502 4380 4882 SUDHL4_400M_050219_2,4884 SUDHL4_400M_050219_2,4884,PAPPPPPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4888 22.063 369.0 173200.0 25 0 24996.0 + 15 AAAGRAPAL 9 79 399.2350845835802 796.4556162339604 2 399.2356140017509 MULTI CID FTMS 0 0 0 4887 74830.296875 0.1151078059430533 -30 0.346038818359375 1 Unmodified _AAAGRAPAL_ REV__ENST00000442885.2_1_11:65655295-65655958:-|nuORF;REV__ENST00000528937.1_1_11:65654989-65655958:-|nuORF;REV__ENST00000532679.5_1_11:65653270-65655931:-|nuORF 24.67388899826682 0.2172451872415813 6 AAAAGR 6 -1 51.159 0.0 0.0 6.4233 0.0 0.0 0.0 296.16221033267817 296.16221033267817 40.32119467509882 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 AAAAGR 6.4233 - 131 + 1 2.22 56520.9 1.0 503 4383 4887 SUDHL4_400M_050219_2,4888 SUDHL4_400M_050219_2,4888,AAAGRAPAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4889 22.077 800.0 65992.0 25 0 8045.4 -1 0 59 785.8595023896956 3139.4089036923824 4 786.1117431521416 MULTI CID FTMS 0 0 0 4887 65198.98828125 0.841000806085822 -3 0.0245113372802734 2 6 SNQ 3 -1 15.177 0.0 0.0 0.48344 0.0 0.0 2116.9481015457013 690.2598971002561 2807.2079986459576 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.5 SNQ 0.48344 - 71 + 1 2.22 45952.4 0.3300000131130218 504 4383 4887 SUDHL4_400M_050219_2,4889 SUDHL4_400M_050219_2,4889, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4894 22.105 800.0 139200.0 25 0 19096.0 + 18387 KVRDLEVK 8 101 493.8031459869349 985.5917390406698 2 493.8033630251884 MULTI CID FTMS 0 0 0 4893 123880.3828125 0.7465071142953666 -2 0.0079555511474609 1 Unmodified _KVRDLEVK_ REV__ENSG00000155363|ENST00000369645|MOV10;REV__ENST00000468624.5_1_1:113217534-113241292:+|nuORF;REV__ENST00000496577.5_1_1:113231344-113241292:+|nuORF;REV__nc|ENSG00000155363|Q9HCE1-2|MOV10 24.020572477871973 0.5389365498350341 6 {M(Oxidation (M))|F}TVK 4 -1 53.047 0.0 0.0 5.3823 0.0 0.0 492.2946034162125 0.0 492.2946034162125 0.0 30.705619161342096 0.0 0.0 0 1.924742501084005 0.0 0.4247425010840047 0.0 {M(Oxidation (M))|F}TVK 5.3823 - 198 1 2.22 91023.2 0.5600000023841858 505 4387 4893 SUDHL4_400M_050219_2,4894 SUDHL4_400M_050219_2,4894,KVRDLEVK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4896 22.11 107.0 485600.0 25 0 83114.0 + 12543 GVGPVPARA 9 69 412.2429889046579 822.4714248761159 2 412.2426940798759 MULTI CID FTMS 0 0 0 4895 563876.3125 0.4273568066715633 14 -0.0662994384765625 1 Unmodified _GVGPVPARA_ ENSG00000129636|ENST00000320640|ITFG1 28.486842064014134 0.1687311288560894 6 [VG]GPV 5 4 48.601 0.0 0.0 5.9091 0.0 0.0 0.0 410.2155028721725 410.2155028721725 25.924530016037707 0.0 0.0 0.0 0 0.6382104921644451 2.0 0.0 0.0 + [VG]GPV 5.9091 + + 153 + 1 2.22 49902.2 1.0 506 4388 4895 SUDHL4_400M_050219_2,4896 SUDHL4_400M_050219_2,4896,GVGPVPARA False True GVGPVPARA 22.110309 412.242694079876 5883333.0 4895.0 ENSG00000129636|ENST00000320640|ITFG1 4.512800852457683 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4897 22.118 460.0 138420.0 25 0 20201.0 + 18597 LADPSAKAV 9 86 436.2480645156896 870.4815760981793 2 436.2481262087822 MULTI CID FTMS 0 0 0 4895 137924.6875 0.3073985530588614 18 -0.0851268768310546 2 Unmodified _LADPSAKAV_ ENSG00000107854|ENST00000371627|TNKS2;ENSG00000173273|ENST00000310430|TNKS;nc|ENSG00000173273|O95271-2|TNKS 18.1463463914782 0.3454829746528889 6 [{I|L}A]D 3 6 32.447 0.0 0.0 3.7275 0.0 0.0 0.0 568.310103280073 568.310103280073 21.138560523870296 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + [{I|L}A]D 3.7275 + + 112 1 2.22 60176.8 1.0 507 4388 4895 SUDHL4_400M_050219_2,4897 SUDHL4_400M_050219_2,4897,LADPSAKAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4911 22.172 122.0 326550.0 25 0 22716.0 + 35018 SQPYGQQSY 9 81 529.2329544002242 1056.4513558672484 2 529.2328369021416 MULTI CID FTMS 0 0 0 4910 407119.09375 0.4753503826100675 18 -0.1781597137451172 1 Unmodified _SQPYGQQSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 41.8396318013385 0.0653578398400075 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQQS 6 3 36.833 0.0 0.0 3.4865 0.0 0.0 0.0 393.14169945539214 393.14169945539214 4.931153458833389 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.5 0.3494850021680094 + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQQS 3.4865 + + 295 1 2.22 37538.2 1.0 508 4401 4910 SUDHL4_400M_050219_2,4911 SUDHL4_400M_050219_2,4911,SQPYGQQSY True True SQPYGQQSY 22.171806 529.232836902142 4587166.5 4910.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 0.95613823334376 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4916 22.191 215.0 172670.0 25 0 7491.0 + -1 EMETKQMQAF 10 78 629.7758018974215 1257.537050861643 2 629.7759277224541 MULTI CID FTMS 0 0 0 4915 279077.96875 0.0494409846654413 43 -0.4800376892089844 1 Oxidation (M) _EM(Oxidation (M))ETKQMQAF_ REV__ENSG00000137877|ENST00000320955|SPTBN5 13.042465956692816 0.6287021003332052 6 [QA]HDEAGANQA{M(Oxidation (M))|F} 12 -1 + 48.797 0.0 0.0 3.8803 3.8803 74.404 0.0 0.0 0.0 2.703037561203842 20.19585969540585 2.703037561203842 2.455678082598922 0 0.7742275032520141 0.0 0.0 0.3252574989159953 [QA]HDEAGANQA{M(Oxidation (M))|F};[QA]HDEAGAQNA{M(Oxidation (M))|F};[QA]HDEAGGQQA{M(Oxidation (M))|F};[QA]HDEAQNQA{M(Oxidation (M))|F};[HV]QNAG[HA]{M(Oxidation (M))|F}M{M(Oxidation (M))|F};[HD][QA]EAGANQA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[HV]NQAG[HA]{M(Oxidation (M))|F}M{M(Oxidation (M))|F};[QA]HDEQANQA{M(Oxidation (M))|F};[QA]HDEANQQA{M(Oxidation (M))|F} 3.8803;3.6851;3.641;3.5939;3.5523;3.4239;3.3987;3.357;3.3546;3.3546 -;-;-;-;-;-;-;-;-;- 1186 1 2.22 33020.3 1.0 509 4405 4915 SUDHL4_400M_050219_2,4916 SUDHL4_400M_050219_2,4916,EMETKQMQAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4922 22.221 702.0 126540.0 25 0 18304.0 + 38735 TVADHIQKV 9 96 505.78321250489415 1009.5518720765884 2 505.7850829958916 MULTI CID FTMS 0 0 0 4921 78326.6640625 0.5786862296197753 -1 0.0040645599365234 1 Unmodified _TVADHIQKV_ ENSG00000181789|ENST00000314797|COPG1 41.95555342248728 0.0647214845423414 6 {[TV]|[{I|L}S]}AHD{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 49.097 0.0 0.0 4.8632 4.8632 75.235 0.0 0.0 0.0 1.0543687975728773 1.0543687975728773 1.0543687975728773 1.0543687975728773 0 1.5451140161145327 2.0 0.2887254899964357 0.0 {[TV]|[{I|L}S]}AHD{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}ADH{I|L}QVK;{[TV]|[{I|L}S]}WH{I|L}QVK;{[TV]|[{I|L}S]}ADH{I|L}QKV;{[TV]|[{I|L}S]}WH{I|L}QKV;{[TV]|[{I|L}S]}AHD{I|L}[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}{[WT]|[RM]}[YN]{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}A[KS]{[YD]|[{M(Oxidation (M))|F}M]}{[QV]|[N{I|L}]|[RA]|[KV]};[H{I|L}]DAQK[W{I|L}];[H{I|L}]DAS{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]} 4.8632;4.7588;4.5897;4.5536;4.3845;3.9511;2.6381;2.471;2.1682;1.5493 -;-;-;+;-;-;-;-;-;- + 245 1 2.22 72545.8 1.0 510 4410 4921 SUDHL4_400M_050219_2,4922 SUDHL4_400M_050219_2,4922,TVADHIQKV True True TVADHIQKV 22.221431 505.785082995892 515402.875 4921.0 ENSG00000181789|ENST00000314797|COPG1 5.1589195728302 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4923 22.235 800.0 61344.0 25 0 10518.0 + 1413 ALDESHNQNL 10 75 570.7667863230474 1139.5190197128948 2 570.7664672732353 MULTI CID FTMS 0 0 0 4921 83651.6953125 1.0 0 0.0 2 Unmodified _ALDESHNQNL_ ENSG00000072786|ENST00000176763|STK10;ENST00000517360.1_1_5:171471888-171480055:-|nuORF 16.149105407346934 0.5765757077271437 6 TY 2 10 14.949 0.0 0.0 1.3118 0.0 0.0 857.3975730349636 0.0 857.3975730349636 0.0 1.7609125905568117 0.0 0.0 0 0.0 0.0 0.0 0.0 TY 1.3118 - 43 + 1 2.22 41978.9 0.4300000071525574 511 4410 4921 SUDHL4_400M_050219_2,4923 SUDHL4_400M_050219_2,4923,ALDESHNQNL False True ALDESHNQNL 22.235262 570.766467273235 396929.28125 4921.0 ENSG00000072786|ENST00000176763|STK10;;ENST00000517360.1_1_5:171471888-171480055:-|nuORF 2.0787657101949057 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4925 22.252 800.0 182080.0 25 0 19247.0 + 23662 LTRQLELFA 9 100 545.8183634745656 1089.622174015931 2 545.8182861208916 MULTI CID FTMS 0 0 0 4924 163736.421875 0.5785993576131107 27 -0.2640857696533203 1 Unmodified _LTRQLELFA_ REV__ENSG00000261787|ENST00000563496|TCF24 10.073929032068715 0.563993802247229 6 KTT[{I|L}P][WP]K 8 -1 28.322 0.0 0.0 2.5993 0.0 0.0 120.0610739146169 0.0 120.0610739146169 0.0 10.161679480790893 0.0 0.0 0 0.0 0.0 1.274227503252014 0.2215141619232908 KTT[{I|L}P][WP]K 2.5993 - 323 + 1 2.22 116223.5 0.7200000286102295 512 4411 4924 SUDHL4_400M_050219_2,4925 SUDHL4_400M_050219_2,4925,LTRQLELFA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4928 22.272 800.0 157160.0 25 0 7522.3 -1 0 84 656.7737356123687 2623.0658365830745 4 657.0253784060478 MULTI CID FTMS 0 0 0 4927 88296.90625 0.3526282904135995 -11 0.0839519500732421 1 6 [DP]VQS{[MS]|[{M(Oxidation (M))|F}A]}D 8 -1 45.102 0.0 0.0 1.7195 0.0 0.0 0.0 1760.683112936876 1760.683112936876 37.61107503885448 0.0 0.0 0.0 0 0.9247425010840048 1.0457574905606752 0.9947026752325154 0.3054621874040891 [DP]VQS{[MS]|[{M(Oxidation (M))|F}A]}D 1.7195 - 510 1 2.22 94982.7 0.3799999952316284 513 4413 4927 SUDHL4_400M_050219_2,4928 SUDHL4_400M_050219_2,4928, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4931 22.293 800.0 142340.0 25 0 6772.0 + 10859 GADTLLSANHA 11 128 535.267612900696 1068.520672868192 2 535.2663452029228 MULTI CID FTMS 0 0 0 4930 109175.546875 0.1289193332716342 -24 0.1497802734375 1 Unmodified _GADTLLSANHA_ REV__ENST00000498717.2_1_3:143566691-143567164:-|nuORF 17.11289562659939 0.6791789249425932 6 [EP]QDTRNP{I|L} 9 -1 + 38.343 0.0 0.0 3.5884 3.5884 81.258 0.0 0.0 0.0 18.86213996863504 11.426675035687316 11.426675035687316 9.208187539523756 0 0.0 0.0 0.8494850021680094 0.3807196863200844 [EP]QDTRNP{I|L};[EP]QDTRGGP{I|L};[EP][AG]DTRNP{I|L};[EP][AG]DTRGGP{I|L};[EP]Q{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[QP]P{I|L};{[TV]|[{I|L}S]}AA[VG]TDQ[HA];{[QD]|[EN]|[WG]|[KD]|[RS]}[KP][{M(Oxidation (M))|F}V]Q[HA];[EP]QKKNYY;{[QD]|[EN]|[WG]|[KD]|[RS]}TN[H{I|L}][WR];[EP]QKK[HD]{[MG]|[TS]} 3.5884;2.7266;2.7266;1.869;0.92396;0.77244;0.72795;0.45854;0.26024;0.035162 -;-;-;-;-;-;-;-;-;- 545 + 1 2.22 89814.5 0.5699999928474426 514 4415 4930 SUDHL4_400M_050219_2,4931 SUDHL4_400M_050219_2,4931,GADTLLSANHA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4932 22.3 432.0 182120.0 25 0 38727.0 + -1 TVRMEKEV 8 104 504.2635684002769 0 504.2635681033134 PEAK CID FTMS 0 0 0 4930 131401.796875 0.8855337733072544 1 -0.0240592956542968 2 Oxidation (M) _TVRM(Oxidation (M))EKEV_ REV__ENSG00000197102|ENST00000360184|DYNC1H1 7.289230182591677 0.5720337190865908 6 V 1 -1 0.088644 0.0 0.0 0.008807 0.0 0.0 484.30898386911 420.1096285455688 904.4186124146788 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.008807 + + 1 + 1 2.22 65577.5 1.0 515 4415 4930 SUDHL4_400M_050219_2,4932 SUDHL4_400M_050219_2,4932,TVRMEKEV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4934 22.308 282.0 260990.0 25 0 30962.0 + 26811 APPPPPPPP 9 86 433.7422270350796 865.4699011369593 2 433.7424194216728 MULTI CID FTMS 0 0 0 4933 184330.234375 0.4614909982706314 53 -0.4976329803466797 1 Unmodified _PAPPPPPPP_ ENSG00000095539|ENST00000210633|SEMA4G;nc|ENSG00000150275|Q96QU1-2|PCDH15;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000204463|P46379-2|BAG6;ENSG00000005483|ENST00000311117|KMT2E;ENSG00000137460|ENST00000511601|FHDC1;ENSG00000106299|ENST00000223023|WASL;ENSG00000142235|ENST00000600059|LMTK3;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;nc|ENSG00000127481|Q5T4S7-5|UBR4;nc|ENSG00000150275|Q96QU1-6|PCDH15;nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000173273|O95271-2|TNKS;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;ENSG00000215474|ENST00000425639|SKOR2;ENSG00000107758|ENST00000360663|PPP3CB;nc|ENSG00000127481|Q5T4S7-4|UBR4;nc|ENSG00000137710|P35241-5|RDX;ENSG00000105879|ENST00000440859|CBLL1;nc|ENSG00000105879|Q75N03-2|CBLL1;nc|ENSG00000168066|Q15637-7|SF1;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;nc|ENSG00000171634|Q12830-4|BPTF;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000126464|ENST00000418929|PRR12;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;ENSG00000158195|ENST00000618852|WASF2;ENSG00000184937|ENST00000452863|WT1;nc|ENSG00000165821|Q9Y467|SALL2;nc|ENSG00000150275|Q96QU1-4|PCDH15;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000204463|P46379|BAG6;nc|ENSG00000005483|Q8IZD2-7|KMT2E;nc|ENSG00000204463|P46379-5|BAG6;ENSG00000168066|ENST00000377390|SF1;ENSG00000165821|ENST00000537235|SALL2;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;nc|ENSG00000182095|O15417-2|TNRC18;nc|ENSG00000171634|Q12830|BPTF;ENSG00000105323|ENST00000392006|HNRNPUL1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;nc|ENSG00000133816|O94851|MICAL2;ENSG00000010017|ENST00000011619|RANBP9;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;nc|ENSG00000185090|Q5VSG8-3|MANEAL;nc|ENSG00000184937|P19544-8|WT1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000150275|Q96QU1|PCDH15;ENSG00000185090|ENST00000373045|MANEAL;ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000127481|Q5T4S7-2|UBR4;nc|ENSG00000107758|P16298-4|PPP3CB;ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000005483|Q8IZD2-2|KMT2E;nc|ENSG00000107758|P16298-3|PPP3CB;ENSG00000183307|ENST00000331437|TMEM121B;nc|ENSG00000126464|Q9ULL5-2|PRR12;nc|ENSG00000137710|P35241-2|RDX;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;nc|ENSG00000095539|Q9NTN9|SEMA4G;ENSG00000171634|ENST00000306378|BPTF;ENSG00000204463|ENST00000676615|BAG6;ENSG00000122574|ENST00000242140|WIPF3;nc|ENSG00000107758|P16298-2|PPP3CB;ENSG00000182601|ENST00000331351|HS3ST4;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;nc|ENSG00000137710|P35241-4|RDX;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;ENSG00000184863|ENST00000401878|RBM33;ENSG00000173273|ENST00000310430|TNKS;ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000168066|Q15637-2|SF1;ENSG00000171992|ENST00000307662|SYNPO 67.41302359171755 0.0220989861905124 6 [PA]PPPP[YK] 8 3 + 43.594 0.0 0.0 5.037 5.037 87.148 0.0 0.0 0.0 13.089989253352565 17.395775165767873 13.089989253352565 13.399480616943508 0 1.1989700043360187 1.6989700043360187 0.0 0.0 [PA]PPPP[YK];[YK]APP[YK];{[HG]|PP}PAPP[YK];{[HG]|PP}APPP[YK];[PA][YK]P[YK];[PA]P[YK][YK];[YK]PAP[YK];{[HG]|PP}PPAP[YK];{[HG]|PP}A[YK][YK] 5.037;3.4888;3.3303;2.9824;2.886;2.3657;1.8954;1.7369;0.31116 -;-;-;-;-;-;-;-;- 135 1 2.22 62295.9 1.0 516 4416 4933 SUDHL4_400M_050219_2,4934 SUDHL4_400M_050219_2,4934,PAPPPPPPP False False APPPPPPPP 22.307976 433.742419421673 25038678.0 4933.0 ENSG00000095539|ENST00000210633|SEMA4G;;nc|ENSG00000150275|Q96QU1-2|PCDH15;;ENST00000295899.9_1_3:63849453-63849567:-|nuORF;;nc|ENSG00000184937|P19544-4|WT1;;nc|ENSG00000204463|P46379-2|BAG6;;ENSG00000005483|ENST00000311117|KMT2E;;ENSG00000137460|ENST00000511601|FHDC1;;ENSG00000106299|ENST00000223023|WASL;;ENSG00000142235|ENST00000600059|LMTK3;;ENST00000463095.2_1_10:55581620-55664971:-|nuORF;;nc|ENSG00000127481|Q5T4S7-5|UBR4;;nc|ENSG00000150275|Q96QU1-6|PCDH15;;nc|ENSG00000127481|Q5T4S7-3|UBR4;;nc|ENSG00000173273|O95271-2|TNKS;;ENST00000532461.5_1_11:110102596-110108435:-|nuORF;;ENSG00000215474|ENST00000425639|SKOR2;;ENSG00000107758|ENST00000360663|PPP3CB;;nc|ENSG00000127481|Q5T4S7-4|UBR4;;nc|ENSG00000137710|P35241-5|RDX;;ENSG00000105879|ENST00000440859|CBLL1;;nc|ENSG00000105879|Q75N03-2|CBLL1;;nc|ENSG00000168066|Q15637-7|SF1;;ENST00000307403.6_1_7:155500050-155531112:+|nuORF;;nc|ENSG00000171634|Q12830-4|BPTF;;nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000126464|ENST00000418929|PRR12;;nc|ENSG00000183307|Q9BXQ6-2|TMEM121B;;ENSG00000158195|ENST00000618852|WASF2;;ENSG00000184937|ENST00000452863|WT1;;nc|ENSG00000165821|Q9Y467|SALL2;;nc|ENSG00000150275|Q96QU1-4|PCDH15;;ENSG00000127481|ENST00000375254|UBR4;;nc|ENSG00000184937|P19544-2|WT1;;nc|ENSG00000204463|P46379|BAG6;;nc|ENSG00000005483|Q8IZD2-7|KMT2E;;nc|ENSG00000204463|P46379-5|BAG6;;ENSG00000168066|ENST00000377390|SF1;;ENSG00000165821|ENST00000537235|SALL2;;ENST00000590137.1_1_17:74143442-74143655:+|nuORF;;nc|ENSG00000182095|O15417-2|TNRC18;;nc|ENSG00000171634|Q12830|BPTF;;ENSG00000105323|ENST00000392006|HNRNPUL1;;nc|ENSG00000184937|P19544|WT1;;nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1;;nc|ENSG00000133816|O94851|MICAL2;;ENSG00000010017|ENST00000011619|RANBP9;;ENST00000234091.8_1_2:8819035-8819278:+|nuORF;;nc|ENSG00000185090|Q5VSG8-3|MANEAL;;nc|ENSG00000184937|P19544-8|WT1;;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;;nc|ENSG00000150275|Q96QU1|PCDH15;;ENSG00000185090|ENST00000373045|MANEAL;;ENSG00000137710|ENST00000645495|RDX;;nc|ENSG00000127481|Q5T4S7-2|UBR4;;nc|ENSG00000107758|P16298-4|PPP3CB;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000005483|Q8IZD2-2|KMT2E;;nc|ENSG00000107758|P16298-3|PPP3CB;;ENSG00000183307|ENST00000331437|TMEM121B;;nc|ENSG00000126464|Q9ULL5-2|PRR12;;nc|ENSG00000137710|P35241-2|RDX;;ENST00000413725.5_1_11:64533292-64535069:-|nuORF;;nc|ENSG00000095539|Q9NTN9|SEMA4G;;ENSG00000171634|ENST00000306378|BPTF;;ENSG00000204463|ENST00000676615|BAG6;;ENSG00000122574|ENST00000242140|WIPF3;;nc|ENSG00000107758|P16298-2|PPP3CB;;ENSG00000182601|ENST00000331351|HS3ST4;;nc|ENSG00000184937|P19544-3|WT1;;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1;;nc|ENSG00000137710|P35241-4|RDX;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;;ENSG00000184863|ENST00000401878|RBM33;;ENSG00000173273|ENST00000310430|TNKS;;ENSG00000150275|ENST00000644397|PCDH15;;nc|ENSG00000168066|Q15637-2|SF1;;ENSG00000171992|ENST00000307662|SYNPO 1.648676872253418 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4937 22.317 93.0 403340.0 25 0 49533.0 + 1 AAAAGPALR 9 58 399.2350845835802 796.4556162339604 2 399.2350341677666 MULTI CID FTMS 0 0 0 4936 573924.5 0.8828401427074243 5 -0.068643569946289 1 Unmodified _AAAAGPALR_ ENST00000604430.1_1_16:29332285-29370594:+|nuORF 28.486842064014134 0.1687311288560894 6 AAAAG 5 4 49.208 0.0 0.0 6.1784 0.0 0.0 0.0 452.2620943658813 452.2620943658813 46.73393743112328 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 + AAAAG 6.1784 + + 104 + 1 2.22 36423.7 1.0 517 4418 4936 SUDHL4_400M_050219_2,4937 SUDHL4_400M_050219_2,4937,AAAAGPALR False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4938 22.331 800.0 83024.0 25 0 5350.4 -1 FRCQCPAGGAF 11 98 635.7756932595429 1269.5368335858857 2 635.7758666872978 MULTI CID FTMS 0 0 0 4936 84376.125 0.3901843076033335 -6 0.0603485107421875 2 2 Carbamidomethyl (C) _FRC(Carbamidomethyl (C))QC(Carbamidomethyl (C))PAGGAF_ ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3 18.1463463914782 0.6576820063886638 6 {[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F} 11 -1 + 90.947 0.0 0.0 7.1638 7.1638 84.317 0.0 0.0 0.0 2.340832060333668 16.575773191777927 2.340832060333668 2.340832060333668 0 0.8807196863200843 1.154901959985743 0.7059771852360797 1.1549471895720984 {[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};[NP]HDEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F};[NP]HDEAQQGGA{M(Oxidation (M))|F};[NP]HDEAQ[AG]NA{M(Oxidation (M))|F};[NP]HDEA[AG]QNA{M(Oxidation (M))|F};[NP]HDEA[AG][AG]NA{M(Oxidation (M))|F};[NP]HDEA[AG]QGGA{M(Oxidation (M))|F} 7.1638;6.9794;6.4448;6.4448;6.4448;6.2604;6.2604;6.2604;5.5437;5.5437 -;-;-;-;-;-;-;-;-;- 712 1 2.22 54802.1 0.4199999868869781 518 4418 4936 SUDHL4_400M_050219_2,4938 SUDHL4_400M_050219_2,4938,FRCQCPAGGAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4939 22.345 800.0 33107.0 25 0 6608.1 -1 0 34 1057.7713649231794 3170.2922653697383 3 1058.439990222454 MULTI CID FTMS 0 0 0 4936 76693.8984375 1.0 0 0.0 3 6 SQS 3 -1 13.812 0.0 0.0 0.43568 0.0 0.0 2293.917156582432 571.2343844049436 2865.151540987376 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SQS 0.43568 - 14 + 1 2.22 32601.7 0.3199999928474426 519 4418 4936 SUDHL4_400M_050219_2,4939 SUDHL4_400M_050219_2,4939, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4942 22.36 495.0 202600.0 25 0 60250.0 + 30593 REVQTNDL 8 122 487.7484682553436 973.4823835774872 2 487.7484313845634 MULTI CID FTMS 0 0 0 4941 129558.8828125 0.909464364059141 -3 0.0409793853759765 1 Unmodified _REVQTNDL_ ENSG00000145425|ENST00000274065|RPS3A 31.26834338654808 0.3863233259196171 6 {NN|[MP]|[D{I|L}]|[EV]}RQTND{I|L} 8 2 + 66.302 0.0 0.0 6.8108 6.8108 88.4 0.0 0.0 0.0 7.835755116765299 16.40978057358332 7.835755116765299 7.835755116765299 0 0.8807196863200843 1.2218487496163564 0.3807196863200844 0.7134679910804405 {NN|[MP]|[D{I|L}]|[EV]}RQTND{I|L};{[RE]|[WV]}VQTND{I|L};{NN|[MP]|[D{I|L}]|[EV]}RQTGGD{I|L};{NN|[MP]|[D{I|L}]|[EV]}R[AG]TND{I|L};{[RE]|[WV]}V[AG]TND{I|L};{[RE]|[WV]}VQTGGD{I|L};{NN|[MP]|[D{I|L}]|[EV]}R[AG]TGGD{I|L};{NN|[MP]|[D{I|L}]|[EV]}RQG{[SA]|[TG]}D{I|L};{[TV]|[{I|L}S]}RQEND{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}TND{I|L} 6.8108;6.0058;5.8593;5.8593;5.0544;5.0544;4.9134;4.6689;4.6268;4.2606 -;+;-;-;-;-;-;-;-;- + 649 1 2.22 79286.3 1.0 520 4420 4941 SUDHL4_400M_050219_2,4942 SUDHL4_400M_050219_2,4942,REVQTNDL False True REVQTNDL 22.360232 487.748431384563 536947.0625 4941.0 ENSG00000145425|ENST00000274065|RPS3A 5.014624277750651 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4945 22.381 800.0 27122.0 25 0 6731.6 -1 0 25 1003.4179290045493 3007.2319576138475 3 1004.419177234173 MULTI CID FTMS 0 0 0 4944 63207.7890625 0.779301750920404 -2 0.0153408050537109 1 6 Y 1 -1 6.9897 0.0 0.0 0.23243 0.0 0.0 1530.5495368148224 1310.604850388515 2841.154387203337 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.23243 - 2 + 1 2.22 36727.8 0.3400000035762787 521 4422 4944 SUDHL4_400M_050219_2,4945 SUDHL4_400M_050219_2,4945, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4949 22.405 800.0 143510.0 25 0 10086.0 + 884 AEVLNRVRP 9 132 351.8772382086495 1052.6098852261484 3 351.8768188357353 MULTI CID FTMS 0 0 0 4948 62426.2734375 0.4857218771347613 -14 0.1533470153808593 1 Unmodified _AEVLNRVRP_ REV__ENSG00000130309|ENST00000252599|COLGALT1;REV__ENST00000593832.1_1_19:17691448-17692250:+|nuORF 7.608950283845883 0.6490595679007971 6 VAE{I|L} 4 -1 47.044 0.0 0.0 4.4693 0.0 0.0 0.0 637.3537189566096 637.3537189566096 34.279732813000145 0.0 0.0 0.0 0 0.2887254899964357 1.5228787452803376 0.0 0.0 VAE{I|L} 4.4693 - 32 + 1 2.22 99318.8 0.3799999952316284 522 4425 4948 SUDHL4_400M_050219_2,4949 SUDHL4_400M_050219_2,4949,AEVLNRVRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4952 22.417 302.0 313260.0 25 0 14796.0 -1 0 57 636.781692931874 2543.097665861096 4 637.0336791872978 MULTI CID FTMS 0 0 0 4951 221432.453125 1.0 0 0.0 1 6 DG[WM][RV]DD 8 -1 23.02 0.0 0.0 0.90521 0.0 0.0 63.9949346913557 1501.6901749210272 1565.6851096123828 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 DG[WM][RV]DD 0.90521 - 35 + 1 2.22 78118.5 1.0 523 4427 4951 SUDHL4_400M_050219_2,4952 SUDHL4_400M_050219_2,4952, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4953 22.424 388.0 211350.0 25 0 29723.0 + + 17649 KPTGARPSAL 10 72 499.2932568359517 996.5719607387032 2 499.2933532595634 MULTI CID FTMS 0 0 0 4951 153984.296875 0.8209017262268447 -2 0.0204391479492187 2 Unmodified _KPTAAFHLL_ ENST00000473611.5_1_6:33247055-33247262:-|nuORF;ENSG00000227057|ENST00000374617|WDR46 23.1484247019978 0.2366544122328345 6 KPTG 4 -1 45.433 0.0 0.0 4.5589 0.0 0.0 0.0 610.3313692682249 610.3313692682249 27.383220559823314 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 KPTG 4.5589 - 72 + 1 2.22 71436.2 1.0 524 4427 4951 SUDHL4_400M_050219_2,4953 SUDHL4_400M_050219_2,4953,KPTAAFHLL False False KPTGARPSAL 22.424103 499.2941 1434289152.0 4951.0 ENST00000473611.5_1_6:33247055-33247262:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 6.951751550038655 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4955 22.433 255.0 238370.0 25 0 24360.0 + 39235 VAAAESHPL 9 80 447.7374695206419 893.4603861080839 2 447.7383605837822 MULTI CID FTMS 0 0 0 4954 146196.125 1.0 0 0.0 1 Unmodified _VAAAESHPL_ ENST00000416120.1_1_6:64259201-64259360:-|nuORF;ENST00000489392.1_1_9:136216448-136216496:+|nuORF 30.22481116460888 0.1466181017706357 6 {[VA]|[{I|L}G]}A 3 6 35.062 0.0 0.0 3.9243 0.0 0.0 0.0 649.2959078424436 649.2959078424436 21.56681865368853 0.0 0.0 0.0 0 0.7614393726401688 1.6989700043360187 0.0 0.0 + {[VA]|[{I|L}G]}A 3.9243 + + 122 + 1 2.22 54725.3 1.0 525 4428 4954 SUDHL4_400M_050219_2,4955 SUDHL4_400M_050219_2,4955,VAAAESHPL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 4956 22.438 312.0 228720.0 25 0 28899.0 -1 0 37 509.6274506126005 2543.1008707300025 5 509.6276733279228 MULTI CID FTMS 0 0 0 4954 131963.84375 0.9554496821535364 1 -0.0256214141845703 2 6 K 1 -1 2.7642 0.0 0.0 0.10869 0.0 0.0 2190.516563944649 221.46322046451408 2411.979784409164 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.10869 - 4 + 1 2.22 61915.7 1.0 526 4428 4954 SUDHL4_400M_050219_2,4956 SUDHL4_400M_050219_2,4956, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4957 22.45 649.0 102370.0 25 0 14967.0 + 35019 SQPYGQQSY 9 91 529.2329544002242 1056.4513558672484 2 529.2329589724541 MULTI CID FTMS 0 0 0 4954 91013.0546875 0.1062664243273756 45 -0.414011001586914 3 Unmodified _SQPYGQQSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 16.149105407346934 0.3995459350917656 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQQSQSY 9 4 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQQS + + 24.908 19.447 2.9452 2.3577 2.3577 50.693 0.0 0.0 0.0 0.0 1.6882278296879178 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GQQSQSY 2.3577 - 238 + 1 2.22 55908.4 1.0 527 4428 4954 SUDHL4_400M_050219_2,4957 SUDHL4_400M_050219_2,4957,SQPYGQQSY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4959 22.455 129.0 250820.0 25 0 11835.0 + -1 CLCFAPCIAF 10 70 629.7752386879666 1257.5359244427332 2 629.7761718630791 MULTI CID FTMS 0 0 0 4958 382925.65625 0.7929988346038275 2 -0.0090751647949218 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 12.531546534597751 0.6372748319968624 6 [QA]HDEAQNQA{M(Oxidation (M))|F} 11 -1 + 47.951 0.0 0.0 3.8131 3.8131 71.712 0.0 0.0 0.0 3.872735630574091 15.59994749176294 3.872735630574091 0.796896906561031 0 0.8182503180159344 0.0 0.0 0.3807196863200844 [QA]HDEAQNQA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[QA]HDAEQNQA{M(Oxidation (M))|F};[QA]HDAEQQNA{M(Oxidation (M))|F};[QA]HDEAQGGQA{M(Oxidation (M))|F};[QA]HDEA[AG]NQA{M(Oxidation (M))|F};[QA]HDEA[AG]QNA{M(Oxidation (M))|F};[QA]HDEAQ[AG]NA{M(Oxidation (M))|F};[HD]EAQAQNQA{M(Oxidation (M))|F};[HD]EAQAQQNA{M(Oxidation (M))|F} 3.8131;3.7497;3.5737;3.5103;3.0872;3.0872;3.0238;3.0238;2.9787;2.9154 -;-;-;-;-;-;-;-;-;- 535 1 2.22 29302.8 1.0 528 4429 4958 SUDHL4_400M_050219_2,4959 SUDHL4_400M_050219_2,4959,CLCFAPCIAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 4968 22.499 800.0 81159.0 25 0 7734.4 + + -1 VEGEGEEEGEEY 12 101 678.2593375554917 1354.5041221777833 2 678.2589599490166 MULTI CID FTMS 0 0 0 4967 73548.0390625 0.277026421793389 -6 0.0241813659667968 1 Carbamidomethyl (C) _TEC(Carbamidomethyl (C))SSSYMVEY_ ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000123416|ENST00000336023|TUBA1B;nc|ENSG00000123416|P68363-2|TUBA1B 21.53697664764585 0.586507868110548 6 {[DA]|[EG]}EEGVEEGEEY 12 -1 + 113.86 0.0 0.0 8.4059 8.4059 82.956 0.0 0.0 0.0 0.026053099415165 16.611814434466183 0.026053099415165 0.026053099415165 0 0.8252574989159953 0.958607314841775 3.423877368056628 0.0 {[DA]|[EG]}EEGVEEGEEY;EEGEGVEEGEEY;{[DA]|[EG]}EGEVEEGEEY;EEGGEVEEGEEY;{[DA]|[EG]}EEGEVEGEEY;EEGEGEVEGEEY;EENEVEEGEEY;EEEGGVEEGEEY;{[DA]|[EG]}EGEEVEGEEY;EEGGEEVEGEEY 8.4059;8.404;8.2769;8.275;7.7749;7.773;7.728;7.6784;7.6459;7.644 -;-;-;-;-;-;-;-;-;- 14081 1 2.22 53954.9 0.449999988079071 529 4437 4967 SUDHL4_400M_050219_2,4968 SUDHL4_400M_050219_2,4968,TECSSSYMVEY False False VEGEGEEEGEEY 22.499375 678.258959949017 1002118.875 4967.0 ENSG00000167552|ENST00000301071|TUBA1A;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;ENSG00000123416|ENST00000336023|TUBA1B;;nc|ENSG00000123416|P68363-2|TUBA1B 4.868575890858968 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4972 22.514 221.0 232250.0 25 0 17734.0 -1 0 60 656.7737356123687 2623.0658365830745 4 657.2753784060478 MULTI CID FTMS 0 0 0 4971 165775.640625 0.6254713153629324 18 -0.2104778289794922 1 6 DQ{[RE]|[WV]}Q 5 -1 11.695 0.0 0.0 0.44584 0.0 0.0 1763.705429526818 200.0564974420532 1963.761926968871 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 DQ{[RE]|[WV]}Q 0.44584 - 29 + 1 2.22 44470.3 1.0 530 4440 4971 SUDHL4_400M_050219_2,4972 SUDHL4_400M_050219_2,4972, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4973 22.528 800.0 55282.0 25 0 15278.0 -1 0 36 1165.4657549443489 3493.375435433247 3 1165.799731433392 MULTI CID FTMS 0 0 0 4971 76923.734375 0.2238764181111871 -5 0.0326251983642578 2 6 E 1 -1 6.9897 0.0 0.0 0.20008 0.0 0.0 2837.146946839716 524.1605318658811 3361.307478705597 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20008 - 6 + 1 2.22 42641.3 0.2899999916553497 531 4440 4971 SUDHL4_400M_050219_2,4973 SUDHL4_400M_050219_2,4973, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4974 22.542 800.0 70397.0 25 0 1743.0 -1 0 59 871.6467681920578 3482.557966901831 4 872.1464721560478 MULTI CID FTMS 0 0 0 4971 85515.3359375 0.94190688342129 -1 0.0040664672851562 3 6 V 1 -1 6.9897 0.0 0.0 0.20071 0.0 0.0 1321.5812150889603 2058.88141934966 3380.4626344386206 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.20071 - 6 + 1 2.22 43971.7 0.3700000047683716 532 4440 4971 SUDHL4_400M_050219_2,4974 SUDHL4_400M_050219_2,4974, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4976 22.547 66.0 615850.0 25 0 41351.0 27049 PEQNDRTPL 9 66 535.267612900696 1068.520672868192 2 535.2673828005791 MULTI CID FTMS 0 0 0 4975 764201.875 0.9024035054546892 2 -0.0308609008789062 1 Unmodified _PEQNDRTPL_ ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;ENST00000544562.5_1_14:23067206-23078652:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4 15.847184025352805 0.4077185912009129 6 [EP]QDTR[NP]{I|L} 9 3 + 40.328 0.0 0.0 3.7742 3.7742 81.029 0.0 0.0 0.0 24.843050114734808 7.447274948966935 7.447274948966935 9.208187539523747 0 0.0 0.0 0.9247425010840048 0.4247425010840047 [EP]QDTR[NP]{I|L};[EP][AG]DTR[NP]{I|L} 3.7742;2.9124 -;- 118 + 1 2.22 39088.7 1.0 533 4441 4975 SUDHL4_400M_050219_2,4976 SUDHL4_400M_050219_2,4976,PEQNDRTPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4977 22.555 435.0 187630.0 25 0 18217.0 + 12198 GQRQVGVGY 9 93 482.2543828273268 962.4942127214536 2 482.2541381716728 MULTI CID FTMS 0 0 0 4975 183489.8125 0.5068221951418672 -3 0.0425682067871093 2 Unmodified _GQRQVGVGY_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 36.12702656103203 0.0967173616627612 6 {[QG]|[NA]}RQVGVGY 9 0 + 51.08 0.0 0.0 5.3071 5.3071 83.143 0.0 0.0 0.0 2.147642715192504 32.7524439246897 2.147642715192504 6.7609125905568135 0 1.424742501084005 0.0 0.0 0.0 + + {[QG]|[NA]}RQVGVGY;{[QG]|[NA]}RQVGGVY;{[QG]|[NA]}R[AG]VGVGY;{[QG]|[NA]}RQVNVY;[VG]GQQRVGY;{[QG]|[NA]}R[AG]VGGVY;[VG]{NN|[MP]|[D{I|L}]|[EV]}[{I|L}A]GVGY;[VG]GQQVRGY;[VG]{NN|[MP]|[D{I|L}]|[EV]}[Q{I|L}]VGY;[VG]GQQVGRY 5.3071;4.6046;4.3504;3.9316;3.6864;3.6479;3.5743;3.3736;3.2084;3.1669 +;-;-;-;-;-;-;-;-;- + 363 1 2.22 69776.4 1.0 534 4441 4975 SUDHL4_400M_050219_2,4977 SUDHL4_400M_050219_2,4977,GQRQVGVGY True True GQRQVGVGY 22.554887 482.254138171673 1475124.25 4975.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 5.736700534820557 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4978 22.569 800.0 165130.0 25 0 14062.0 + 14756 ILDESHERV 9 100 549.2832153646095 1096.551877796019 2 549.2825195193291 MULTI CID FTMS 0 0 0 4975 111536.140625 0.7730794939529597 -2 0.0385112762451171 3 Unmodified _ILDESHERV_ ENSG00000128534|ENST00000249299|LSM8 51.41523569358685 0.0372669606867193 6 {I|L}{I|L}DESHERV 9 0 + 85.072 0.0 0.0 7.7581 7.7581 95.893 0.0 0.0 0.0 48.88621229653701 11.623855178835925 11.623855178835925 19.58674701179433 0 1.110924374808178 2.0 0.7302046884880937 0.3807196863200844 + + {I|L}{I|L}DESHERV;{I|L}{I|L}DE{I|L}{[WT]|[RM]}[HA];{I|L}{I|L}DE{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}NP;{I|L}{I|L}DE{I|L}{[CP]|[EA]}[TP]P;{I|L}{I|L}DE{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}GGP;{I|L}{I|L}DV[VP]{[QC]|[C(Carbamidomethyl (C))A]}NP;V{I|L}EESHERV;{I|L}VEESHERV;{I|L}{I|L}VD[VP]{[QC]|[C(Carbamidomethyl (C))A]}NP;{I|L}{I|L}V[HC]A[KC]NP 7.7581;5.9719;5.6604;4.9403;4.8207;4.748;4.6791;4.6064;4.1263;3.6053 +;-;-;-;-;-;-;-;-;- + 551 + 1 2.22 101482.5 0.5 535 4441 4975 SUDHL4_400M_050219_2,4978 SUDHL4_400M_050219_2,4978,ILDESHERV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4981 22.578 113.0 419260.0 25 0 58879.0 + 14757 ILDESHERV 9 81 366.5245209501253 1096.551733450576 3 366.5244018435478 MULTI CID FTMS 0 0 0 4980 273172.46875 0.848754698045844 1 -0.0309009552001953 1 Unmodified _ILDESHERV_ ENSG00000128534|ENST00000249299|LSM8 28.49450938151212 0.1686335738423394 6 {I|L}{I|L}DESHERV 9 0 + 69.792 0.0 0.0 6.3646 6.3646 91.773 0.0 0.0 0.0 46.81585569599101 7.1400125535309655 7.1400125535309655 13.81340746852576 0 0.0 2.0 0.5 0.0 + + {I|L}{I|L}DESHERV;{I|L}{I|L}DEV{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AY 6.3646;5.1049 +;- + 110 + 1 2.22 42951.2 1.0 536 4443 4980 SUDHL4_400M_050219_2,4981 SUDHL4_400M_050219_2,4981,ILDESHERV False True ILDESHERV 22.577702 366.524401843548 1563799.0 4980.0 ENSG00000128534|ENST00000249299|LSM8 5.48212194442749 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4982 22.592 800.0 101680.0 25 0 7016.0 -1 FRCQCPAGGAF 11 98 635.7756932595429 1269.5368335858857 2 635.7759277224541 MULTI CID FTMS 0 0 0 4980 124915.0625 0.577650338538178 19 -0.1612358093261718 2 2 Carbamidomethyl (C) _FRC(Carbamidomethyl (C))QC(Carbamidomethyl (C))PAGGAF_ ENSG00000008300|ENST00000164024|CELSR3;nc|ENSG00000008300|Q9NYQ7-2|CELSR3 24.020572477871973 0.5281922720044371 6 [NP]HDEAQQNA{M(Oxidation (M))|F} 11 -1 + 100.34 0.0 0.0 7.9034 7.9034 89.244 0.0 0.0 0.0 5.940910616566868 16.575773191777927 5.940910616566868 5.940910616566868 0 1.0 1.0 0.6861818737241735 1.274227503252014 [NP]HDEAQQNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F};[NP]HDEAQQGGA{M(Oxidation (M))|F};[NP]HDEAQ[AG]NA{M(Oxidation (M))|F};[NP]HDEA[AG]QNA{M(Oxidation (M))|F};[HD][NP]EAQQNA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F};[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F} 7.9034;7.4354;7.3889;7.1844;7.1844;7.1844;6.9076;6.7188;6.7188;6.7188 -;-;-;-;-;-;-;-;-;- 2183 1 2.22 63477.0 0.5799999833106995 537 4443 4980 SUDHL4_400M_050219_2,4982 SUDHL4_400M_050219_2,4982,FRCQCPAGGAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4983 22.604 699.0 151540.0 25 0 35396.0 -1 SMLEDVQRA 9 115 532.7546294226747 1063.4947059121494 2 532.7549316287041 MULTI CID FTMS 0 0 0 4980 87101.7734375 0.6420850268484074 -8 0.097930908203125 3 Oxidation (M) _SM(Oxidation (M))LEDVQRA_ ENSG00000106344|ENST00000223073|RBM28 36.506200033944 0.094635877243972 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EDVQ{[QV]|[N{I|L}]|[RA]|[KV]} 9 -1 + 50.938 0.0 0.0 4.7897 4.7897 84.136 0.0 0.0 0.0 32.97933224628249 2.3764301679958777 2.3764301679958777 9.208187539523747 0 1.25 0.6575773191777937 0.4247425010840047 0.3054621874040891 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EDVQ{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EDV[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[PS]NA{I|L}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[PS]N{I|L}A{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[PS]GGA{I|L}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}AN[PS][MT]P;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}AN[{M(Oxidation (M))|F}T]PAP;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A[NG]DVQ{[QV]|[N{I|L}]|[RA]|[KV]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[PS]GG{I|L}A{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}N[PS][MT]P 4.7897;3.9239;3.8299;3.4521;2.9682;2.9542;2.946;2.6057;2.5903;2.5763 +;-;-;-;-;-;-;-;-;- + 327 + 1 2.22 85431.4 1.0 538 4443 4980 SUDHL4_400M_050219_2,4983 SUDHL4_400M_050219_2,4983,SMLEDVQRA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4986 22.614 172.0 338380.0 25 0 47180.0 + 32141 RVPPPPQSV 9 70 488.78278324079616 975.5510135483923 2 488.7824279665947 MULTI CID FTMS 0 0 0 4985 238695.5 0.4365335346875363 -14 0.1490497589111328 1 Unmodified _RVPPPPQSV_ ENSG00000160691|ENST00000448116|SHC1;nc|ENSG00000160691|P29353-2|SHC1;nc|ENSG00000160691|P29353-3|SHC1;nc|ENSG00000160691|P29353-5|SHC1;nc|ENSG00000160691|P29353-7|SHC1;nc|ENSG00000160691|P29353|SHC1 49.55428908609986 0.0413471690215031 6 [RV]PPPPQSV 9 0 + 57.813 0.0 0.0 5.9262 5.9262 88.051 0.0 0.0 0.0 16.980523937757752 45.59439983606076 16.980523937757752 9.208187539523747 0 1.5471062485323517 1.2218487496163564 0.0 0.0 + + [RV]PPPPQSV;[RV]PPPP[AG]SV;[RV]P[YK]QSV;[RV][YK]PQSV;[RV]P[YK][AG]SV;[RV][YK]P[AG]SV;[RV][MT]KKDV 5.9262;4.9823;3.7637;3.5963;2.8143;2.6469;1.4514 +;-;-;-;-;-;- + 92 1 2.22 52844.9 1.0 539 4445 4985 SUDHL4_400M_050219_2,4986 SUDHL4_400M_050219_2,4986,RVPPPPQSV True True RVPPPPQSV 22.613795 488.782427966595 6169527.5 4985.0 nc|ENSG00000160691|P29353-5|SHC1;;nc|ENSG00000160691|P29353|SHC1;;nc|ENSG00000160691|P29353-2|SHC1;;nc|ENSG00000160691|P29353-7|SHC1;;nc|ENSG00000160691|P29353-3|SHC1;;ENSG00000160691|ENST00000448116|SHC1 9.209606329600016 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4987 22.622 487.0 212090.0 25 0 20473.0 -1 0 122 383.2398281434001 764.4651033536002 2 383.2396728396416 MULTI CID FTMS 0 0 0 4985 93254.1171875 0.4413270565317366 -5 0.1003608703613281 2 6 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}HR 6 -1 + 55.125 0.0 0.0 7.2109 7.2109 96.435 0.0 0.0 0.0 44.327665712010216 17.945312593723983 17.945312593723983 55.12456261857125 0 0.4247425010840047 2.0 0.0 0.3252574989159953 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{I|L}HR 7.2109 - 51 + 1 2.22 84464.0 1.0 540 4445 4985 SUDHL4_400M_050219_2,4987 SUDHL4_400M_050219_2,4987, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4988 22.636 800.0 63857.0 25 0 7588.1 + 45166 YQGPPPQQGY 10 92 567.7644167560835 1133.514280578967 2 567.7641479372978 MULTI CID FTMS 0 0 0 4985 84272.578125 1.0 0 0.0 3 Unmodified _YQGPPPQQGY_ ENSG00000141380|ENST00000415083|SS18;ENST00000580958.5_1_18:23598320-23615185:-|nuORF;nc|ENSG00000141380|Q15532-2|SS18 62.57269311338072 0.0298375429882549 6 [YQ]GPPPQ 7 3 51.317 0.0 0.0 4.5272 0.0 0.0 0.0 363.1309869813852 363.1309869813852 30.51493210686104 0.0 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.9361818737241736 + [YQ]GPPPQ 4.5272 + + 814 1 2.22 42497.9 0.449999988079071 541 4445 4985 SUDHL4_400M_050219_2,4988 SUDHL4_400M_050219_2,4988,YQGPPPQQGY True True YQGPPPQQGY 22.636229 567.764147937298 644594.6875 4985.0 ENSG00000141380|ENST00000415083|SS18;;ENST00000580958.5_1_18:23598320-23615185:-|nuORF;;nc|ENSG00000141380|Q15532-2|SS18 6.915677547454834 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4991 22.657 800.0 39315.0 25 0 10115.0 -1 0 22 1154.802624574003 3461.3860443222093 3 1155.471240222454 MULTI CID FTMS 0 0 0 4990 57974.203125 0.0431514566235837 -27 0.2911872863769531 1 6 E 1 -1 4.6041 0.0 0.0 0.13301 0.0 0.0 2805.1590068239657 524.1627901666624 3329.321796990628 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.13301 - 1 + 1 2.22 35688.7 0.3000000119209289 542 4447 4990 SUDHL4_400M_050219_2,4991 SUDHL4_400M_050219_2,4991, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 4992 22.664 422.0 149580.0 25 0 25995.0 + 20131 LKLWYNHIAY 10 69 440.9067267652589 1319.6983508959763 3 440.9069091677666 MULTI CID FTMS 0 0 0 4990 90885.328125 0.850156982005058 -1 0.0038928985595703 2 Unmodified _LKLWYNHIAY_ ENSG00000136802|ENST00000372600|LRRC8A 6.1918466704503565 0.6979955778746556 6 AY 2 8 29.024 0.0 0.0 2.1993 0.0 0.0 1067.5879058049593 0.0 1067.5879058049593 0.0 20.440228147639203 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + AY 2.1993 + + 21 + 1 2.22 58224.0 1.0 543 4447 4990 SUDHL4_400M_050219_2,4992 SUDHL4_400M_050219_2,4992,LKLWYNHIAY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 4995 22.686 800.0 19737.0 25 0 5362.5 -1 0 22 1160.4673404042906 3478.380191813072 3 1160.800341784954 MULTI CID FTMS 0 0 0 4994 37590.1796875 0.5193054374781376 1 -0.0177268981933593 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 2.22 25118.8 0.3000000119209289 544 4449 4994 SUDHL4_400M_050219_2,4995 SUDHL4_400M_050219_2,4995, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5009 22.749 706.0 113330.0 25 0 8605.0 + 45393 YTAQPTQGY 9 106 514.7378913564926 1027.461229779785 2 514.7377197146416 MULTI CID FTMS 0 0 0 5008 70909.328125 0.6106834964701187 -6 0.0240116119384765 1 Unmodified _YTAQPTQGY_ ENSG00000182944|ENST00000397938|EWSR1;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;nc|ENSG00000182944|Q01844-2|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1 36.12702656103203 0.0967173616627612 6 [C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}TPQGY 8 5 + 31.324 0.0 0.0 3.0486 3.0486 70.73 0.0 0.0 0.0 7.613525574522484 8.77211306332179 7.613525574522484 1.4215905896025305 0 0.0 0.0 0.0 0.0 [C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}TPQGY;[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}PTQGY;[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}TP[AG]GY;[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}PT[AG]GY;[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}THP[NP];[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}TYA[NP];[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}T[QA][{M(Oxidation (M))|F}V];[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}TYQ[PG];[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}THPG[PG];[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}T[TA]{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3.0486;2.9103;2.1472;2.0088;1.0891;0.91771;0.86368;0.81577;0.6041;0.57501 -;-;-;-;-;-;-;-;-;- 869 + 1 2.22 67889.1 1.0 545 4462 5008 SUDHL4_400M_050219_2,5009 SUDHL4_400M_050219_2,5009,YTAQPTQGY True True YTAQPTQGY 22.748842 514.737719714642 452514.53125 5008.0 nc|ENSG00000182944|Q01844-6|EWSR1;;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;;nc|ENSG00000182944|Q01844-5|EWSR1;;nc|ENSG00000182944|Q01844-4|EWSR1;;nc|ENSG00000182944|Q01844-3|EWSR1;;nc|ENSG00000182944|Q01844-2|EWSR1;;ENSG00000182944|ENST00000397938|EWSR1 6.16241439183553 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5014 22.777 800.0 96156.0 25 0 9811.2 + 2396 AQPETRVSY 9 94 525.763988194236 1049.513423455272 2 525.7643310427666 MULTI CID FTMS 0 0 0 5013 71784.71875 0.3641480370167048 -8 0.0430583953857421 1 Unmodified _AQPETRVSY_ ENSG00000158615|ENST00000367188|PPP1R15B 22.736283301280096 0.2418982879461534 6 [QA]PEV 5 4 40.326 0.0 0.0 3.8424 0.0 0.0 0.0 522.2155855768186 522.2155855768186 25.722385214173364 0.0 0.0 0.0 0 0.5 0.8860566476931632 0.4247425010840047 0.0 [QA]PEV 3.8424 - 79 + 1 2.22 66463.8 0.449999988079071 546 4466 5013 SUDHL4_400M_050219_2,5014 SUDHL4_400M_050219_2,5014,AQPETRVSY False True AQPETRVSY 22.777407 525.764331042767 2109836.75 5013.0 ENSG00000158615|ENST00000367188|PPP1R15B 6.5171380043029785 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5016 22.794 800.0 37566.0 25 0 10284.0 -1 0 24 1165.4657549443489 3493.375435433247 3 1165.800219714642 MULTI CID FTMS 0 0 0 5015 115329.6015625 0.3356516465273709 22 -0.1776256561279297 1 6 G 1 -1 6.9897 0.0 0.0 0.20008 0.0 0.0 2147.7495011011483 1285.579336743417 3433.328837844565 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20008 - 1 + 1 2.22 35509.7 0.3799999952316284 547 4467 5015 SUDHL4_400M_050219_2,5016 SUDHL4_400M_050219_2,5016, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5021 22.82 670.0 140350.0 25 0 41051.0 30195 QVVGVFRP 8 92 451.2655826313408 900.5166123294816 2 451.2647582888603 MULTI CID FTMS 0 0 0 5020 121961.203125 0.8718406526051788 1 -0.0280590057373046 1 Unmodified _QVVGVFRP_ ENST00000475678.5_1_2:219129258-219130549:-|nuORF;ENST00000494720.5_1_2:219130300-219130549:-|nuORF 2.577480529830294 0.808687252328423 6 {I|L} 1 8 11.109 0.0 0.0 1.2337 0.0 0.0 769.421685426941 0.0 769.421685426941 0.0 0.9281828848095586 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2337 - 24 + 1 2.22 80263.1 1.0 548 4471 5020 SUDHL4_400M_050219_2,5021 SUDHL4_400M_050219_2,5021,QVVGVFRP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5022 22.834 800.0 18083.0 25 0 5051.3 -1 0 21 1162.127751198103 3483.361424194509 3 1162.796069324017 MULTI CID FTMS 0 0 0 5020 69057.765625 1.0 0 0.0 2 6 Q 1 -1 1.9897 0.0 0.0 0.05712 0.0 0.0 3096.2484308857183 256.0261629693969 3352.274593855115 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.05712 - 1 + 1 2.22 22310.9 0.2899999916553497 549 4471 5020 SUDHL4_400M_050219_2,5022 SUDHL4_400M_050219_2,5022, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5025 22.854 800.0 66129.0 25 0 2904.8 + 19251 LEKDYEEVG 9 94 541.2561760438707 1080.497799154541 2 541.2548095583916 MULTI CID FTMS 0 0 0 5024 89597.078125 1.0 0 0.0 1 Unmodified _LEKDYEEVG_ ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000530835.1_1_11:90016856-90017168:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C 18.1463463914782 0.3454829746528889 6 K{I|L}ER 4 7 36.414 0.0 0.0 3.3702 0.0 0.0 536.1753407209 0.0 536.1753407209 0.0 25.305168975722765 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 K{I|L}ER 3.3702 - 133 1 2.22 51843.0 0.449999988079071 550 4473 5024 SUDHL4_400M_050219_2,5025 SUDHL4_400M_050219_2,5025,LEKDYEEVG False True LEKDYEEVG 22.854496 541.254809558392 402390.875 5024.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000127824|ENST00000248437|TUBA4A;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000167553|ENST00000301072|TUBA1C;;ENST00000530835.1_1_11:90016856-90017168:+|nuORF;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;ENSG00000167552|ENST00000301071|TUBA1A;;ENSG00000075886|ENST00000321253|TUBA3D;;ENSG00000198033|ENST00000400113|TUBA3C;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000198033|P0DPH7-2|TUBA3C;;nc|ENSG00000123416|P68363-2|TUBA1B;;nc|ENSG00000127824|P68366-2|TUBA4A 2.248021682103475 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5026 22.859 254.0 335950.0 25 0 33211.0 6415 EAAGKAGL 8 114 358.7003619396585 0 358.7005493044853 PEAK CID FTMS 0 0 0 5024 107987.0703125 0.1156504601203792 -23 0.1522808074951172 2 Unmodified _EAAGKAGL_ ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18 9.347437153973935 0.5488964601725408 6 A{I|L}E 3 7 22.505 0.0 0.0 3.1459 0.0 0.0 129.04151870177947 270.1572790451791 399.1987977469586 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6307196863200843 0.0 A{I|L}E 3.1459 - 38 + 1 2.22 69579.5 1.0 551 4473 5024 SUDHL4_400M_050219_2,5026 SUDHL4_400M_050219_2,5026,EAAGKAGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5029 22.871 272.0 283540.0 25 0 47437.0 + 32142 RVPPPPQSV 9 71 488.78278324079616 975.5510135483923 2 488.7820312380791 MULTI CID FTMS 0 0 0 5028 196296.765625 0.3589934495874959 16 -0.1000862121582031 1 Unmodified _RVPPPPQSV_ ENSG00000160691|ENST00000448116|SHC1;nc|ENSG00000160691|P29353-2|SHC1;nc|ENSG00000160691|P29353-3|SHC1;nc|ENSG00000160691|P29353-5|SHC1;nc|ENSG00000160691|P29353-7|SHC1;nc|ENSG00000160691|P29353|SHC1 43.77239144664712 0.0547478964384323 6 [RV]PPP[QP][VS] 9 0 + 39.274 0.0 0.0 4.0258 4.0258 85.449 0.0 0.0 0.0 15.73113657167476 27.67992158002109 15.73113657167476 22.72878745280337 0 1.392159058960253 1.0969100130080565 0.0 0.0 + + [RV]PPP[QP][VS];[RV][YK][QP][VS];[RV][MT]KKDV 4.0258;1.696;1.2142 +;-;- + 54 1 2.22 65380.4 1.0 552 4475 5028 SUDHL4_400M_050219_2,5029 SUDHL4_400M_050219_2,5029,RVPPPPQSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5032 22.881 226.0 327390.0 25 0 47234.0 + -1 IQRLETMK 8 80 517.7868584544028 1033.5591639756055 2 517.7868530154228 MULTI CID FTMS 0 0 0 5031 259477.515625 0.1574133177291571 -28 0.2064189910888672 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 6 KTT[{I|L}P][WP]K 8 -1 38.421 0.0 0.0 3.7174 0.0 0.0 63.99891046659929 0.0 63.99891046659929 0.0 21.205672625722 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.3054621874040891 KTT[{I|L}P][WP]K 3.7174 - 139 + 1 2.22 62515.9 1.0 553 4477 5031 SUDHL4_400M_050219_2,5032 SUDHL4_400M_050219_2,5032,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5037 22.899 182.0 663980.0 25 0 189540.0 -1 0 50 1154.802624574003 3461.3860443222093 3 1155.137133777142 MULTI CID FTMS 0 0 0 5036 1420272.375 0.9433191358927692 6 -0.0262680053710937 1 6 YG[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}GM 7 -1 20.846 0.0 0.0 0.60224 0.0 0.0 1457.5368754763092 1122.5394991510375 2580.076374627347 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}GM 0.60224 - 166 + 1 2.22 104154.2 1.0 554 4481 5036 SUDHL4_400M_050219_2,5037 SUDHL4_400M_050219_2,5037, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5044 22.937 800.0 88136.0 25 0 6014.9 -1 0 73 725.658363844966 2173.9532621350977 3 725.6594116091728 MULTI CID FTMS 0 0 0 5043 52403.49609375 0.458506156561559 -7 0.0303287506103515 1 6 TVGGD 5 -1 49.425 0.0 0.0 2.2735 0.0 0.0 1726.7548192682482 0.0 1726.7548192682482 0.0 29.618806617312643 0.0 0.0 0 0.8494850021680094 0.0 0.7742275032520141 0.0 TVGGD 2.2735 - 97 1 2.22 60763.4 0.3700000047683716 555 4487 5043 SUDHL4_400M_050219_2,5044 SUDHL4_400M_050219_2,5044, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5045 22.951 800.0 80001.0 25 0 26908.0 + -1 LFICPFGTSAL 11 53 613.3178507601867 1224.6211485871734 2 613.3181640505791 MULTI CID FTMS 0 0 0 5043 81221.296875 1.0 0 0.0 2 Carbamidomethyl (C) _LFIC(Carbamidomethyl (C))PFGTSAL_ REV__ENST00000462770.5_1_3:133661447-133748739:-|nuORF 5.731851221503515 0.8481046878870278 6 QA{I|L} 3 -1 13.812 0.0 0.0 1.1279 0.0 0.0 894.4371408740859 0.0 894.4371408740859 0.0 8.239087409443188 0.0 0.0 0 0.0 0.0 0.0 0.0 QA{I|L} 1.1279 - 43 + 1 2.22 54823.3 0.4199999868869781 556 4487 5043 SUDHL4_400M_050219_2,5045 SUDHL4_400M_050219_2,5045,LFICPFGTSAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5053 22.989 633.0 151870.0 25 0 24725.0 -1 0 101 460.238534835526 459.2312583689261 1 460.2378417849541 MULTI CID FTMS 0 0 0 5052 111461.0 0.6304179703707697 -17 0.1006603240966796 1 6 {M(Oxidation (M))|F} 1 -1 9.9148 0.0 0.0 2.159 0.0 0.0 294.1515444790807 0.0 294.1515444790807 0.0 4.430283238465815 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.159 - 12 + 1 2.22 79796.2 1.0 557 4494 5052 SUDHL4_400M_050219_2,5053 SUDHL4_400M_050219_2,5053, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5059 23.013 312.0 230570.0 25 0 100500.0 -1 0 50 560.2935057768586 559.2862293102586 1 560.2924682497978 MULTI CID FTMS 0 0 0 5058 244796.8125 0.7405198358878683 -9 0.0457324981689453 1 6 {[ET]|[MV]}{I|L}[TP] 5 -1 + 32.275 0.0 0.0 5.7708 5.7708 91.496 0.0 0.0 0.0 6.020599913279625 11.817496819840656 6.020599913279625 26.58870936703728 0 0.8494850021680094 0.0 0.7302046884880937 0.0 {[ET]|[MV]}{I|L}[TP];[TP]{I|L}{[ET]|[MV]};[{I|L}P]T{[ET]|[MV]} 5.7708;1.0167;0.58217 -;-;- 16 + 1 2.22 59953.5 1.0 558 4499 5058 SUDHL4_400M_050219_2,5059 SUDHL4_400M_050219_2,5059, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5067 23.054 800.0 66647.0 25 0 5875.7 2397 AQPETRVSY 9 84 525.763988194236 1049.513423455272 2 525.7643920779228 MULTI CID FTMS 0 0 0 5066 45797.7890625 0.2323220774172705 32 -0.25787353515625 1 Unmodified _AQPETRVSY_ ENSG00000158615|ENST00000367188|PPP1R15B 13.042465956692816 0.4836390050082244 6 [QA]PE 4 5 28.684 0.0 0.0 2.7331 0.0 0.0 0.0 621.3001803392124 621.3001803392124 14.704999916446797 0.0 0.0 0.0 0 0.4247425010840047 0.8239087409443188 0.0 0.0 + [QA]PE 2.7331 + + 37 + 1 2.22 46065.8 0.4399999976158142 559 4506 5066 SUDHL4_400M_050219_2,5067 SUDHL4_400M_050219_2,5067,AQPETRVSY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5068 23.068 800.0 59333.0 25 0 2674.0 -1 0 44 667.0882783314061 3330.4050093240303 5 667.2887451052666 MULTI CID FTMS 0 0 0 5066 62878.46875 0.2168230770648214 -67 0.5338916778564453 2 6 D 1 -1 5.4846 0.0 0.0 0.16468 0.0 0.0 2793.886162743755 418.4589022272094 3212.3450649709644 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.16468 - 1 + 1 2.22 41949.0 0.3600000143051147 560 4506 5066 SUDHL4_400M_050219_2,5068 SUDHL4_400M_050219_2,5068, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5071 23.088 800.0 63012.0 25 0 2592.6 + -1 KIMDQVQQA 9 91 538.7737287166113 1075.5329045000226 2 538.7734252810478 MULTI CID FTMS 0 0 0 5070 63481.12109375 0.6510696406193411 1 -0.0164241790771484 1 Oxidation (M) _KIM(Oxidation (M))DQVQQA_ ENSG00000134982|ENST00000257430|APC;nc|ENSG00000134982|P25054-3|APC;nc|ENSG00000134982|P25054-2|APC 39.94969957227396 0.0757326808254658 6 [AG]AE[R{M(Oxidation (M))|F}]VQ 8 -1 44.6 0.0 0.0 4.1468 0.0 0.0 0.0 214.0853696701976 214.0853696701976 22.09137916201556 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.7059771852360797 1.1861818737241734 [AG]AE[R{M(Oxidation (M))|F}]VQ 4.1468 - 608 1 2.22 44551.5 0.4699999988079071 561 4508 5070 SUDHL4_400M_050219_2,5071 SUDHL4_400M_050219_2,5071,KIMDQVQQA False False KIMDQVQQA 23.08797 538.773425281048 302322.0 5070.0 ENSG00000134982|ENST00000257430|APC;;nc|ENSG00000134982|P25054-3|APC;;nc|ENSG00000134982|P25054-2|APC 7.020715872446696 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5075 23.109 617.0 118140.0 25 0 6048.4 27050 PEQNDRTPL 9 116 535.2673495980498 1068.5201462628995 2 535.2668334841728 MULTI CID FTMS 0 0 0 5074 119671.265625 0.1899996467412525 -19 0.1289100646972656 1 Unmodified _PEQNDRTPL_ ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;ENST00000544562.5_1_14:23067206-23078652:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4 25.399314129420983 0.2080152500878129 6 A{I|L} 2 8 19.821 0.0 0.0 1.855 0.0 0.0 866.3882015380933 0.0 866.3882015380933 0.0 1.091896990114236 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 A{I|L} 1.855 - 454 + 1 2.22 59601.8 1.0 562 4511 5074 SUDHL4_400M_050219_2,5075 SUDHL4_400M_050219_2,5075,PEQNDRTPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5077 23.116 205.0 335470.0 25 0 44483.0 + 6526 EALAKAGG 8 98 358.7003619396585 0 358.7003967165947 PEAK CID FTMS 0 0 0 5076 285220.71875 0.305461637803915 16 -0.113321304321289 1 Unmodified _EALAKAGG_ REV__ENSG00000167984|ENST00000359128|NLRC3;REV__nc|ENSG00000167984|Q7RTR2-2|NLRC3;REV__nc|ENSG00000167984|Q7RTR2-4|NLRC3 18.13498045792455 0.4501116112875982 6 A{I|L}E 3 -1 21.753 0.0 0.0 3.0407 0.0 0.0 129.04536391662322 270.1571555960443 399.2025195126675 0.0 0.0 0.0 0.0 0 0.25 0.0 0.3054621874040891 0.0 A{I|L}E 3.0407 - 28 + 1 2.22 60089.9 1.0 563 4512 5076 SUDHL4_400M_050219_2,5077 SUDHL4_400M_050219_2,5077,EALAKAGG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5082 23.133 61.0 963380.0 25 0 158660.0 + -1 IQRLETMK 8 84 517.7868584544028 1033.5591639756055 2 517.7869140505791 MULTI CID FTMS 0 0 0 5081 1040354.9375 0.6311364664230138 11 -0.0784683227539062 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 19.256988751693697 0.6264283240490721 6 KTT[{I|L}P][WP]K 8 -1 45.072 0.0 0.0 4.3608 0.0 0.0 63.99840299330294 0.0 63.99840299330294 0.0 30.98111424532155 0.0 0.0 0 0.8807196863200843 0.0 1.274227503252014 0.2887254899964357 KTT[{I|L}P][WP]K 4.3608 - 142 + 1 2.22 49157.6 1.0 564 4516 5081 SUDHL4_400M_050219_2,5082 SUDHL4_400M_050219_2,5082,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5083 23.135 96.0 393020.0 25 0 48897.0 + 35812 SVKPASSSF 9 72 455.2376792955625 908.460805657925 2 455.2372924685478 MULTI CID FTMS 0 0 0 5081 601402.25 1.0 0 0.0 2 Unmodified _SVKPASSSF_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;nc|ENSG00000001497|Q9Y4W2-3|LAS1L 26.88365393820708 0.1891292719743517 6 [VS][RH]SSS 7 4 29.363 0.0 0.0 3.2322 0.0 0.0 0.0 165.06696497135002 165.06696497135002 5.141208884033457 0.0 0.0 0.0 0 0.3807196863200844 1.5228787452803376 0.7887254899964358 0.0 [VS][RH]SSS 3.2322 - 151 + 1 2.22 37209.2 1.0 565 4516 5081 SUDHL4_400M_050219_2,5083 SUDHL4_400M_050219_2,5083,SVKPASSSF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5088 23.164 800.0 66240.0 25 0 17305.0 -1 0 36 1154.802624574003 3461.3860443222093 3 1155.137744128704 MULTI CID FTMS 0 0 0 5087 135231.625 0.0898183910958452 45 -0.3842983245849609 1 6 E 1 -1 6.9897 0.0 0.0 0.20193 0.0 0.0 2805.157664050528 524.1619967096311 3329.3196607601594 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.20193 - 5 + 1 2.22 56101.4 0.3899999856948852 566 4520 5087 SUDHL4_400M_050219_2,5088 SUDHL4_400M_050219_2,5088, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5092 23.182 424.0 138130.0 25 0 17823.0 + 17060 KLAPIMPAL 9 86 477.2977610221816 952.5809691111632 2 477.2967407107353 MULTI CID FTMS 0 0 0 5091 77629.65625 0.6427301560073069 -5 0.0324916839599609 1 Unmodified _KLAPIMPAL_ REV__ENST00000468220.1_1_3:190040432-190088720:+|nuORF 24.67388899826682 0.2172451872415813 6 K{I|L}A 3 -1 39.253 0.0 0.0 4.1206 0.0 0.0 0.0 637.3420400552282 637.3420400552282 25.27310937020445 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 K{I|L}A 4.1206 + + 23 + 1 2.22 49770.0 1.0 567 4523 5091 SUDHL4_400M_050219_2,5092 SUDHL4_400M_050219_2,5092,KLAPIMPAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5095 23.202 800.0 71535.0 25 0 13778.0 -1 0 41 1186.9886409955618 2371.962729057924 2 1187.491748034954 MULTI CID FTMS 0 0 0 5094 61325.87890625 0.7259960498819172 1 -0.0164241790771484 1 6 Y 1 -1 6.9897 0.0 0.0 0.29468 0.0 0.0 809.2552838448363 1396.61904853825 2205.8743323830863 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.29468 - 5 + 1 2.22 45315.7 0.3000000119209289 568 4525 5094 SUDHL4_400M_050219_2,5095 SUDHL4_400M_050219_2,5095, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5098 23.223 800.0 34521.0 25 0 9212.5 -1 0 30 1188.8411520511156 3563.501626753547 3 1189.176440417767 MULTI CID FTMS 0 0 0 5097 51328.01171875 0.3712366298013377 -17 0.1143436431884765 1 6 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.11167 0.0 0.0 2203.7675702123347 1209.644397332641 3413.411967544976 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.11167 - 1 + 1 2.22 36084.8 0.2899999916553497 569 4527 5097 SUDHL4_400M_050219_2,5098 SUDHL4_400M_050219_2,5098, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5101 23.24 618.0 140260.0 25 0 19453.0 -1 0 97 460.238534835526 459.2312583689261 1 460.2375671267509 MULTI CID FTMS 0 0 0 5100 147871.046875 0.8363514166169194 18 -0.1171989440917968 1 6 {M(Oxidation (M))|F} 1 -1 10.278 0.0 0.0 2.238 0.0 0.0 294.1514376675573 0.0 294.1514376675573 0.0 0.7446950650603323 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.238 - 10 + 1 2.22 73565.6 1.0 570 4529 5100 SUDHL4_400M_050219_2,5101 SUDHL4_400M_050219_2,5101, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5102 23.254 800.0 43987.0 25 0 15528.0 -1 0 26 1079.4651363990151 3235.373579797246 3 1079.800097644329 MULTI CID FTMS 0 0 0 5100 96829.125 0.6118220934110492 -13 0.098764419555664 2 6 G 1 -1 6.9897 0.0 0.0 0.21604 0.0 0.0 1856.663625690937 1318.6691378229127 3175.3327635138503 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.21604 - 2 + 1 2.22 44529.2 0.3600000143051147 571 4529 5100 SUDHL4_400M_050219_2,5102 SUDHL4_400M_050219_2,5102, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5111 23.295 599.0 68455.0 25 0 5140.4 + -1 AQYEDIAQKSKAEAE 15 78 560.9399757592302 1679.7980978778903 3 560.9407836794853 MULTI CID FTMS 0 0 0 5110 70358.1953125 0.5673075093850463 -14 0.1104259490966796 1 Acetyl (Protein N-term),2 Carbamidomethyl (C),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))WRC(Carbamidomethyl (C))RRRC(Carbamidomethyl (C))RVS_ ENSG00000167768|ENST00000252244|KRT1 0.0 0.8751479354844584 6 [YE]D{I|L}{I|L}KQA{I|L}D 10 -1 50.406 0.0 0.0 3.0007 0.0 0.0 0.0 488.1792297015342 488.1792297015342 35.99362475384609 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.5 [YE]D{I|L}{I|L}KQA{I|L}D 3.0007 - 379 1 2.22 38620.8 1.0 572 4537 5110 SUDHL4_400M_050219_2,5111 SUDHL4_400M_050219_2,5111,MWRCRRRCRVS False False AQYEDIAQKSKAEAE 23.295198 560.940783679485 528407.625 5110.0 ENSG00000167768|ENST00000252244|KRT1 6.548349062601726 3.0 False 15.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5115 23.311 276.0 286190.0 25 0 83811.0 + 43480 WVPFSRSDLSP 11 40 430.8880762214017 0 430.8882018923759 PEAK CID FTMS 0 0 0 5114 217742.578125 0.7699424998657417 -364 3.098814010620117 1 Unmodified _WVPFSRSDLSP_ REV__ENST00000594984.1_1_19:50385622-50386129:+|nuORF 1.3295316138638542 0.4761840153648598 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 70510.5 1.0 573 4540 5114 SUDHL4_400M_050219_2,5115 SUDHL4_400M_050219_2,5115,WVPFSRSDLSP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5119 23.332 589.0 177980.0 25 0 36541.0 -1 0 103 504.2635382434659 503.2562617768659 1 504.2633849978447 MULTI CID FTMS 0 0 0 5118 114936.3203125 0.8551563983874626 29 -0.2531452178955078 1 6 Y 1 -1 15.485 0.0 0.0 3.0769 0.0 0.0 322.18217838018467 0.0 322.18217838018467 0.0 6.335858642015069 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 3.0769 - 16 + 1 2.22 82051.0 1.0 574 4543 5118 SUDHL4_400M_050219_2,5119 SUDHL4_400M_050219_2,5119, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5125 23.354 180.0 240440.0 25 0 17901.0 + 26947 PEAAGGQQQAI 11 73 535.2673495980498 1068.5201462628995 2 535.2673828005791 MULTI CID FTMS 0 0 0 5124 332153.5625 0.5273534896556213 18 -0.1875972747802734 1 Unmodified _PEAAGGQQQAI_ REV__ENSG00000160959|ENST00000292524|LRRC14 13.042465956692816 0.7638483625850725 6 A{I|L} 2 -1 22.351 0.0 0.0 2.0918 0.0 0.0 866.3881099853589 0.0 866.3881099853589 0.0 5.840970627320328 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 A{I|L} 2.0918 + + 57 + 1 2.22 42326.3 1.0 575 4548 5124 SUDHL4_400M_050219_2,5125 SUDHL4_400M_050219_2,5125,PEAAGGQQQAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5130 23.381 707.0 140690.0 25 0 52688.0 -1 0 71 502.283157111752 501.275880645152 1 502.2836791872978 MULTI CID FTMS 0 0 0 5129 72128.3203125 0.4465835320422478 64 -0.6915836334228516 1 6 {I|L} 1 -1 9.6777 0.0 0.0 1.9306 0.0 0.0 370.1811978832364 0.0 370.1811978832364 0.0 9.67771005386541 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.9306 - 3 + 1 2.22 80345.5 1.0 576 4552 5129 SUDHL4_400M_050219_2,5130 SUDHL4_400M_050219_2,5130, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5134 23.406 800.0 61584.0 25 0 2444.7 -1 0 79 684.3267647789517 2733.2779532494064 4 684.5785400271416 MULTI CID FTMS 0 0 0 5133 40338.1875 0.5587059779828236 1 -0.044036865234375 1 6 TPQ 3 -1 10.177 0.0 0.0 0.37235 0.0 0.0 1366.634717020694 1037.4345186822875 2404.0692357029816 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TPQ 0.37235 - 116 + 1 2.22 45563.8 0.3799999952316284 577 4555 5133 SUDHL4_400M_050219_2,5134 SUDHL4_400M_050219_2,5134, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5135 23.419 800.0 106960.0 25 0 14673.0 + 35098 SQVPQQSHF 9 105 529.2565191537695 1056.498485374339 2 529.2573119997978 MULTI CID FTMS 0 0 0 5133 97789.1171875 1.0 0 0.0 2 Unmodified _SQVPQQSHF_ ENSG00000116830|ENST00000369466|TTF2;nc|ENSG00000116830|Q9UNY4-2|TTF2 66.45667989310934 0.0225072657982126 6 {[QS]|[NT]}VPQQSH{M(Oxidation (M))|F} 9 0 + 55.339 0.0 0.0 5.238 5.238 85.112 0.0 0.0 0.0 37.72717452981972 8.59526940462149 8.59526940462149 9.208187539523742 0 1.0 1.2218487496163564 0.75 0.5 + + {[QS]|[NT]}VPQQSH{M(Oxidation (M))|F};{[QS]|[NT]}VP[AG]QSH{M(Oxidation (M))|F};{[QS]|[NT]}VPQ[AG]SH{M(Oxidation (M))|F};{[QS]|[NT]}VP[AG][AG]SH{M(Oxidation (M))|F};{[QS]|[NT]}[{I|L}T][HT]SH{M(Oxidation (M))|F};[WK][MT][HA]H{M(Oxidation (M))|F} 5.238;4.3664;4.3664;3.0257;1.4959;0.33819 +;-;-;-;-;- + 332 + 1 2.22 70523.5 0.4699999988079071 578 4555 5133 SUDHL4_400M_050219_2,5135 SUDHL4_400M_050219_2,5135,SQVPQQSHF True True SQVPQQSHF 23.419392 529.257311999798 760014.3125 5133.0 ENSG00000116830|ENST00000369466|TTF2;;nc|ENSG00000116830|Q9UNY4-2|TTF2 9.396711031595864 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5136 23.433 800.0 90079.0 25 0 4012.0 -1 0 64 870.6092909298725 4348.010072316362 5 871.0096923708916 MULTI CID FTMS 0 0 0 5133 80159.75 1.0 0 0.0 3 6 MA 2 -1 12.717 0.0 0.0 0.29247 0.0 0.0 602.2126612829624 3540.6629211310124 4142.875582413974 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 MA 0.29247 - 26 + 1 2.22 54145.1 0.3600000143051147 579 4555 5133 SUDHL4_400M_050219_2,5136 SUDHL4_400M_050219_2,5136, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5138 23.451 800.0 45439.0 25 0 11449.0 -1 0 42 1154.802624574003 3461.3860443222093 3 1155.477709949017 MULTI CID FTMS 0 0 0 5137 104441.6171875 0.0777381606099195 82 -0.9923477172851562 1 6 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.3169 0.0 0.0 1709.5776469606842 1544.7107102529708 3254.288357213655 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.3169 - 4 + 1 2.22 40948.0 0.3499999940395355 580 4556 5137 SUDHL4_400M_050219_2,5138 SUDHL4_400M_050219_2,5138, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5139 23.455 200.0 355820.0 25 0 29973.0 + 14064 IAMVPPLS 8 78 414.2380225345603 826.4614921359206 2 414.2383605837822 MULTI CID FTMS 0 0 0 5137 211708.109375 0.271833958281923 -17 0.1339645385742187 2 Unmodified _IAMVPPLS_ REV__ENSG00000138336|ENST00000373644|TET1;REV__nc|ENSG00000138336|Q8NFU7-3|TET1;REV__nc|ENSG00000138336|Q8NFU7-4|TET1 28.17323086031832 0.4514957916281387 6 [{I|L}A]GP[RN]S{I|L} 8 -1 + 57.049 0.0 0.0 6.9028 6.9028 91.743 0.0 0.0 0.0 23.97940008672037 9.420080530223132 9.420080530223132 9.420080530223132 0 0.6989700043360187 1.6989700043360187 0.6694451763165201 0.0 [{I|L}A]GP[RN]S{I|L};[{I|L}A]GP[RN]TV;[{I|L}A]GPT[RN]V;[{I|L}A]GPG{[NV]|[RG]}{[TV]|[{I|L}S]};[{I|L}A]GPG[QT][{I|L}A];[{I|L}A][NP]{[NV]|[RG]}{[TV]|[{I|L}S]};[{I|L}A][NP][QT][{I|L}A] 6.9028;5.763;4.6265;2.4834;2.1206;1.3469;0.98415 -;-;-;-;-;-;- 89 + 1 2.22 62064.9 1.0 581 4556 5137 SUDHL4_400M_050219_2,5139 SUDHL4_400M_050219_2,5139,IAMVPPLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5142 23.466 275.0 365340.0 25 0 136920.0 7925 ELQVPRSF 8 97 488.26810822675793 0 488.2682372927666 PEAK CID FTMS 0 0 0 5141 236469.734375 0.6455641219016549 18 -0.1675758361816406 1 Unmodified _ELQVPRSF_ ENSG00000187516|ENST00000341016|H2AP 8.593279151180031 0.5573742999696857 6 {M(Oxidation (M))|F}D 2 8 6.9157 0.0 0.0 0.70965 0.0 0.0 487.3060597597354 222.1159609430297 709.422020702765 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.3054621874040891 0.0 {M(Oxidation (M))|F}D 0.70965 - 16 + 1 2.22 82326.5 1.0 582 4558 5141 SUDHL4_400M_050219_2,5142 SUDHL4_400M_050219_2,5142,ELQVPRSF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5143 23.475 455.0 233240.0 25 0 27596.0 + + 30970 RIAPPDRRF 9 82 376.55231022328513 1126.6351012700554 3 376.5522643923759 MULTI CID FTMS 0 0 0 5141 96354.203125 0.1986735805046521 -18 0.155527114868164 2 Unmodified _RLAQRRQAE_ nc|ENSG00000196313|Q96HA1-3|POM121;nc|ENSG00000196313|Q96HA1-2|POM121;ENSG00000272391|ENST00000615331|POM121C;ENSG00000196313|ENST00000434423|POM121;nc|ENSG00000272391|A8CG34|POM121C;nc|ENSG00000146707|Q6PJE2-5|POMZP3;ENSG00000146707|ENST00000310842|POMZP3 11.494710602746466 0.5255349189887087 6 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 1.1072 0.0 0.0 961.5561655784524 0.0 961.5561655784524 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1072 - 36 + 1 2.22 88980.3 1.0 583 4558 5141 SUDHL4_400M_050219_2,5143 SUDHL4_400M_050219_2,5143,RLAQRRQAE False False RIAPPDRRF 23.474511 376.552264392376 6234111.5 5141.0 nc|ENSG00000196313|Q96HA1-3|POM121;;nc|ENSG00000196313|Q96HA1-2|POM121;;ENSG00000272391|ENST00000615331|POM121C;;ENSG00000196313|ENST00000434423|POM121;;nc|ENSG00000272391|A8CG34|POM121C;;nc|ENSG00000146707|Q6PJE2-5|POMZP3;;ENSG00000146707|ENST00000310842|POMZP3 7.323212464650472 3.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5146 23.489 469.0 156690.0 25 0 12605.0 + 29120 QERPSVTSY 9 109 533.761859326935 1065.50916572067 2 533.7618286013603 MULTI CID FTMS 0 0 0 5145 105842.515625 0.5097321294063485 -15 0.1426315307617187 1 Unmodified _QERPSVTSY_ ENSG00000196510|ENST00000455511|ANAPC7;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 69.10491478415734 0.0214449631113747 6 YTSY 4 6 53.175 0.0 0.0 4.9906 0.0 0.0 533.3016834943375 0.0 533.3016834943375 0.0 35.63354911253704 0.0 0.0 0 1.3494850021680094 0.0 0.7742275032520141 0.0 YTSY 4.9906 - 357 1 2.22 62356.3 1.0 584 4560 5145 SUDHL4_400M_050219_2,5146 SUDHL4_400M_050219_2,5146,QERPSVTSY True True QERPSVTSY 23.489465 533.76182860136 1183455.375 5145.0 nc|ENSG00000196510|Q9UJX3-2|ANAPC7;;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;;ENSG00000196510|ENST00000455511|ANAPC7 5.855802536010742 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5149 23.51 800.0 24764.0 25 0 7293.1 -1 0 23 1164.1341714039386 3489.380684812016 3 1164.467822253704 MULTI CID FTMS 0 0 0 5148 31017.939453125 0.3589756891231249 -9 0.1122951507568359 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 26280.8 0.3100000023841858 585 4562 5148 SUDHL4_400M_050219_2,5149 SUDHL4_400M_050219_2,5149, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5150 23.524 800.0 99236.0 25 0 19380.0 20574 LLNNPSAL 8 111 421.2432660007559 0 421.2435180544853 PEAK CID FTMS 0 0 0 5148 96378.8515625 0.9605399395326276 2 -0.0342788696289062 2 Unmodified _LLNNPSAL_ ENSG00000135241|ENST00000257694|PNPLA8;nc|ENSG00000135241|Q9NP80-2|PNPLA8;nc|ENSG00000135241|Q9NP80-3|PNPLA8 13.50788311687929 0.5021269579892848 6 DA 2 7 11.454 0.0 0.0 1.3628 0.0 0.0 523.3076246755368 128.07203088931877 651.3796555648555 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 DA 1.3628 - 24 + 1 2.22 64841.4 0.4099999964237213 586 4562 5148 SUDHL4_400M_050219_2,5150 SUDHL4_400M_050219_2,5150,LLNNPSAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5157 23.56 800.0 95673.0 25 0 24629.0 -1 NMVAKVDEV 9 106 510.7550188381013 1019.4954847430024 2 510.7552368044853 MULTI CID FTMS 0 0 0 5156 47727.66796875 0.4994774372078444 1 -0.0163631439208984 1 Oxidation (M) _NM(Oxidation (M))VAKVDEV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 21.53697664764585 0.2571576504437394 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VAA 5 -1 30.062 0.0 0.0 2.9487 0.0 0.0 0.0 514.2423800104124 514.2423800104124 13.863781092484686 0.0 0.0 0.0 0 1.2614393726401687 0.0 0.0 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VAA 2.9487 - 240 + 1 2.22 62504.5 0.4600000083446502 587 4568 5156 SUDHL4_400M_050219_2,5157 SUDHL4_400M_050219_2,5157,NMVAKVDEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5162 23.589 800.0 154800.0 25 0 39818.0 12316 GSGKGSNK 8 73 734.3782632812182 733.3709868146182 1 734.3753539919853 MULTI CID FTMS 0 0 0 5161 151318.890625 0.9160445271157688 -17 0.183023452758789 1 Unmodified _GSGKGSNK_ ENSG00000170581|ENST00000314128|STAT2;ENST00000556539.5_1_12:56737175-56743495:-|nuORF;nc|ENSG00000170581|P52630-4|STAT2 2.059750862983233 0.8118298629782807 6 EP{I|L}T{M(Oxidation (M))|F}K 6 7 + 54.162 0.0 0.0 7.3853 7.3853 93.315 0.0 0.0 0.0 10.45518919183175 10.45518919183175 10.45518919183175 10.45518919183175 0 1.1989700043360187 1.0 0.5796896906561032 0.0 EP{I|L}T{M(Oxidation (M))|F}K;[EP]{I|L}T{M(Oxidation (M))|F}Q;[TP]{I|L}E{M(Oxidation (M))|F}Q;[KT][NP]{M(Oxidation (M))|F}Q;[KT]{M(Oxidation (M))|F}[{I|L}P]E;[TP]{I|L}T[R{M(Oxidation (M))|F}];[{M(Oxidation (M))|F}T]K[{I|L}P]E 7.3853;5.9597;1.7466;1.3743;0.38907;0.086568;0.04467 -;-;-;-;-;-;- 120 + 1 2.22 89669.6 0.5400000214576721 588 4572 5161 SUDHL4_400M_050219_2,5162 SUDHL4_400M_050219_2,5162,GSGKGSNK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5163 23.592 162.0 509710.0 25 0 190380.0 -1 0 71 432.2441776591637 431.2369011925637 1 432.2422057986259 MULTI CID FTMS 0 0 0 5161 182998.65625 0.7863539991349505 -4 0.028512954711914 2 6 [{I|L}V][NS] 4 -1 + 15.986 0.0 0.0 3.707 3.707 83.365 0.0 0.0 0.0 6.153113369619305 15.043869621537524 6.153113369619305 14.559319556497242 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}V][NS];{[QV]|[N{I|L}]|[RA]|[KV]}[VS] 3.707;0.33083 -;- 7 1 2.22 71276.8 1.0 589 4572 5161 SUDHL4_400M_050219_2,5163 SUDHL4_400M_050219_2,5163, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5164 23.603 630.0 141330.0 25 0 22962.0 + 5076 DGYEQAARV 9 98 504.7407864494671 1007.4670199657342 2 504.7408325076103 MULTI CID FTMS 0 0 0 5161 86764.1640625 1.0 0 0.0 3 Unmodified _DGYEQAARV_ ENSG00000150753|ENST00000280326|CCT5;nc|ENSG00000150753|P48643-2|CCT5 30.63653989081413 0.1413794767160703 6 EQAA[RV] 6 3 29.671 0.0 0.0 2.9451 0.0 0.0 335.1116965223022 0.0 335.1116965223022 0.0 18.25086360938928 0.0 0.0 0 0.3252574989159953 0.0 0.4247425010840047 0.6307196863200843 + EQAA[RV] 2.9451 + + 122 + 1 2.22 73410.4 1.0 590 4572 5161 SUDHL4_400M_050219_2,5164 SUDHL4_400M_050219_2,5164,DGYEQAARV False True DGYEQAARV 23.60276 504.74083250761 279962.125 5161.0 ENSG00000150753|ENST00000280326|CCT5;;nc|ENSG00000150753|P48643-2|CCT5 7.241153717041016 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5167 23.623 761.0 114120.0 25 0 10767.0 + 20912 RVFDHKQGTYGGY 13 114 509.9164089747596 1526.7273975244789 3 509.9163085818291 MULTI CID FTMS 0 0 0 5166 116963.515625 0.551834759449432 -5 0.0467700958251953 1 Unmodified _LMWQLYPEERY_ ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENSG00000184110|ENST00000331666|EIF3C 4.406150317652783 0.8543594311449257 6 GGY 3 10 31.95 0.0 0.0 2.0927 0.0 0.0 1231.610223307485 0.0 1231.610223307485 0.0 18.99288766643714 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 GGY 2.0927 - 211 + 1 2.22 80005.6 1.0 591 4574 5166 SUDHL4_400M_050219_2,5167 SUDHL4_400M_050219_2,5167,LMWQLYPEERY False False RVFDHKQGTYGGY 23.622525 509.916308581829 1114890.375 5166.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 5.691627343495687 3.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5172 23.649 670.0 153130.0 25 0 60444.0 -1 0 81 470.2567971771665 469.24952071056646 1 470.2563354372978 MULTI CID FTMS 0 0 0 5171 91632.8046875 0.0885324053842199 134 -1.5670509338378906 1 6 [PA]T 3 -1 13.054 0.0 0.0 2.7819 0.0 0.0 0.0 197.08869852722583 197.08869852722583 0.2897381673754076 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [PA]T 2.7819 - 18 1 2.22 86087.4 1.0 592 4578 5171 SUDHL4_400M_050219_2,5172 SUDHL4_400M_050219_2,5172, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5173 23.659 617.0 146240.0 25 0 48786.0 -1 0 90 472.2722659727526 471.26498950615263 1 472.2723266482353 MULTI CID FTMS 0 0 0 5171 105782.96875 0.4689274466740493 -36 0.319528579711914 2 6 {[QN]|[E{I|L}]|[KN]}V 3 -1 18.512 0.0 0.0 3.9282 0.0 0.0 0.0 127.07178817242136 127.07178817242136 8.234610140398487 0.0 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 {[QN]|[E{I|L}]|[KN]}V 3.9282 - 30 1 2.22 79669.1 1.0 593 4578 5171 SUDHL4_400M_050219_2,5173 SUDHL4_400M_050219_2,5173, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5177 23.685 800.0 95861.0 25 0 15348.0 -1 SGCPALYCNAF 11 109 630.2650589640939 1258.5155649949877 2 630.2657348513603 MULTI CID FTMS 0 0 0 5176 113480.75 0.8756716877425981 8 -0.1292438507080078 1 2 Carbamidomethyl (C) _SGC(Carbamidomethyl (C))PALYC(Carbamidomethyl (C))NAF_ ENSG00000123473|ENST00000371877|STIL;nc|ENSG00000123473|Q15468|STIL 15.248480904072842 0.7179608125786238 6 [HA]QDEAQEGGA{M(Oxidation (M))|F} 12 -1 + 87.875 0.0 0.0 6.9824 6.9824 85.473 0.0 0.0 0.0 4.246094370095548 16.611814434466183 4.246094370095548 3.6015144778263704 0 0.8494850021680094 0.8860566476931632 0.2742275032520141 0.8494850021680094 [HA]QDEAQEGGA{M(Oxidation (M))|F};[HA]QDEAQENA{M(Oxidation (M))|F};[AG]AHDEAQEGGA{M(Oxidation (M))|F};[AG]D[HA]EAQEGGA{M(Oxidation (M))|F};[AG]AHDEAQENA{M(Oxidation (M))|F};[QA]HDEAQEGGA{M(Oxidation (M))|F};[HA][AG]DEAQEGGA{M(Oxidation (M))|F};[HA]QDEA[AG]EGGA{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[HA]EAQEGGA{M(Oxidation (M))|F};[AG]D[HA]EAQENA{M(Oxidation (M))|F} 6.9824;6.6963;6.645;6.4645;6.3565;6.3214;6.2595;6.2595;6.2059;6.176 -;-;-;-;-;-;-;-;-;- 5907 1 2.22 61686.8 0.4600000083446502 594 4581 5176 SUDHL4_400M_050219_2,5177 SUDHL4_400M_050219_2,5177,SGCPALYCNAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5178 23.695 560.0 175950.0 25 0 21092.0 38018 TPAFFSQTPI 10 107 554.7886078755524 1107.5626628179048 2 554.7889282107353 MULTI CID FTMS 0 0 0 5176 194292.6875 0.2315725888723425 -15 0.1320762634277343 2 Unmodified _TPAFFSQTPI_ ENSG00000158711|ENST00000357992|ELK4 22.65808497894818 0.4596126414678359 6 TP{M(Oxidation (M))|F}K[TA]AY{I|L}P 10 7 + 62.362 0.0 0.0 5.6305 5.6305 91.797 0.0 0.0 0.0 37.94917177197476 10.0 10.0 42.730012720637376 0 1.1549471895720984 2.0 0.0 0.0 TP{M(Oxidation (M))|F}K[TA]AY{I|L}P;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RP][PS]PTP{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[RP][PS]PPT{I|L};{[VA]|[{I|L}G]}{[DS]|[MA]|[CV]|TT}[WR]THH 5.6305;1.7725;1.3171;0.24075 -;-;-;- 709 + 1 2.22 79935.5 1.0 595 4581 5176 SUDHL4_400M_050219_2,5178 SUDHL4_400M_050219_2,5178,TPAFFSQTPI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5180 23.712 800.0 24335.0 25 0 7985.2 -1 0 26 1154.810174006654 3461.4086926201626 3 1155.145800769329 MULTI CID FTMS 0 0 0 5179 61978.859375 0.6098865613059345 1 -0.0364265441894531 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 29744.5 0.3499999940395355 596 4582 5179 SUDHL4_400M_050219_2,5180 SUDHL4_400M_050219_2,5180, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5181 23.718 341.0 190750.0 25 0 23238.0 + 16577 KDKQLMPF 8 93 503.7747878591729 0 503.7752563357353 PEAK CID FTMS 0 0 0 5179 88870.015625 0.7641914570883707 -1 0.0275421142578125 2 Unmodified _KDKQLMPF_ REV__ENSG00000115159|ENST00000438166|GPD2;REV__ENST00000587908.1_1_19:56832840-56833431:-|nuORF;REV__nc|ENSG00000115159|P43304-2|GPD2 18.13498045792455 0.4501116112875982 6 YGD 3 -1 7.0834 0.0 0.0 0.70444 0.0 0.0 599.3493671228397 68.05137048892811 667.4007376117678 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 YGD 0.70444 - 90 + 1 2.22 57341.7 1.0 597 4582 5179 SUDHL4_400M_050219_2,5181 SUDHL4_400M_050219_2,5181,KDKQLMPF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5182 23.732 800.0 24505.0 25 0 5695.3 -1 0 31 1100.7933611341746 3299.358254002724 3 1101.130053699017 MULTI CID FTMS 0 0 0 5179 65176.484375 0.6890470819119267 -3 0.0356597900390625 3 6 D 1 -1 6.9897 0.0 0.0 0.21185 0.0 0.0 2199.3916535162 981.9193525364471 3181.3110060526465 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.21185 - 4 + 1 2.22 30591.2 0.3000000119209289 598 4582 5179 SUDHL4_400M_050219_2,5182 SUDHL4_400M_050219_2,5182, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5184 23.737 113.0 408300.0 25 0 46167.0 + 30971 RLAQRRQAE 9 68 376.55231022328513 1126.6351012700554 3 376.5521118044853 MULTI CID FTMS 0 0 0 5183 354556.5 0.7310631717312301 7 -0.0693378448486328 1 Unmodified _RLAQRRQAE_ REV__ENSG00000130299|ENST00000324894|GTPBP3;REV__ENST00000598038.5_1_19:17448347-17452509:+|nuORF;REV__nc|ENSG00000130299|Q969Y2-2|GTPBP3;REV__nc|ENSG00000130299|Q969Y2-3|GTPBP3;REV__nc|ENSG00000130299|Q969Y2-4|GTPBP3 17.11289562659939 0.3734572693229295 6 PDH 3 -1 7.7917 0.0 0.0 0.69159 0.0 0.0 454.3014353538429 320.1731966608032 774.4746320146461 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PDH 0.69159 - 9 + 1 2.22 41121.0 1.0 599 4583 5183 SUDHL4_400M_050219_2,5184 SUDHL4_400M_050219_2,5184,RLAQRRQAE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5185 23.751 800.0 120510.0 25 0 15718.0 + 17224 KLLGKVETA 9 124 479.8001780067482 957.5858030802964 2 479.8005554080009 MULTI CID FTMS 0 0 0 5183 112624.5859375 0.6931263594769608 -7 0.1052112579345703 2 Unmodified _KLLGKVETA_ ENSG00000129696|ENST00000431156|TTI2 41.95555342248728 0.0647214845423414 6 K{I|L}{I|L} 3 6 45.049 0.0 0.0 4.7045 0.0 0.0 0.0 600.2996879429879 600.2996879429879 12.822774136905949 0.0 0.0 0.0 0 1.1861818737241734 0.6989700043360187 0.0 0.0 + K{I|L}{I|L} 4.7045 + + 701 + 1 2.22 80827.2 0.4699999988079071 600 4583 5183 SUDHL4_400M_050219_2,5185 SUDHL4_400M_050219_2,5185,KLLGKVETA True True KLLGKVETA 23.750603 479.800555408001 630893.125 5183.0 ENSG00000129696|ENST00000431156|TTI2 5.760945955912272 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5186 23.764 800.0 101040.0 25 0 11880.0 + 12059 GQERPSVTSY 10 108 562.2719402410959 1122.5293275489917 2 562.2726318240166 MULTI CID FTMS 0 0 0 5183 105439.7578125 0.6034076152022915 -10 0.1288566589355468 3 Unmodified _GQERPSVTSY_ ENSG00000196510|ENST00000455511|ANAPC7;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 53.31671820480216 0.0606844387689228 6 {[MG]|[TS]}Y[R{M(Oxidation (M))|F}]VTSY 9 4 + 58.012 0.0 0.0 5.168 5.168 76.253 0.0 0.0 0.0 1.0526595187979382 8.938937347570075 1.0526595187979382 1.0526595187979382 0 1.325257498915995 0.0 1.4916440611282626 0.0 {[MG]|[TS]}Y[R{M(Oxidation (M))|F}]VTSY;{[{M(Oxidation (M))|F}C]|[YS]}T[R{M(Oxidation (M))|F}]VTSY;{[QG]|[NA]}ER[PS]VTSY;[AG]GER[PS]VTSY;{[QG]|[NA]}[PS]V{[RE]|[WV]}TSY;{[QG]|[NA]}ER[RP]MSY;{[{M(Oxidation (M))|F}C]|[YS]}[RH][{I|L}P]TSY;{[{M(Oxidation (M))|F}C]|[YS]}G[HV][{I|L}P]TSY;{[MG]|[TS]}Y[R{M(Oxidation (M))|F}]RMY;[AG]GER[RP]MSY 5.168;5.0742;4.8436;4.1915;3.583;3.5469;3.1402;3.0289;2.9802;2.8909 -;-;+;-;-;-;-;-;-;- + 525 1 2.22 65895.2 0.4699999988079071 601 4583 5183 SUDHL4_400M_050219_2,5186 SUDHL4_400M_050219_2,5186,GQERPSVTSY True True GQERPSVTSY 23.764434 562.272631824017 1089363.5 5183.0 nc|ENSG00000196510|Q9UJX3-2|ANAPC7;;ENST00000550231.1_1_12:110825542-110834223:-|nuORF;;ENSG00000196510|ENST00000455511|ANAPC7 4.7214674949646 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5190 23.789 800.0 128410.0 25 0 13889.0 + -1 ALAPSPAAA 9 89 768.6717066349975 2302.9932905051924 3 768.6722900271416 MULTI CID FTMS 0 0 0 5189 50709.68359375 0.5398354970534949 -6 0.1089820861816406 1 ENSG00000146278|ENST00000336032|PNRC1 6 TVGGDE 6 -1 64.558 0.0 0.0 2.8032 0.0 0.0 1726.754063740752 0.0 1726.754063740752 0.0 45.66438345022135 0.0 0.0 0 1.5356668758921828 0.0 0.805462187404089 0.0 TVGGDE 2.8032 - 1237 1 2.22 79187.6 0.4000000059604645 602 4586 5189 SUDHL4_400M_050219_2,5190 SUDHL4_400M_050219_2,5190, False False ALAPSPAAA 23.788949 768.672290027142 617577.5625 5189.0 ENSG00000146278|ENST00000336032|PNRC1 1.4134788115819297 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5195 23.813 532.0 179340.0 25 0 28849.0 + 38740 TVADKIHSV 9 87 485.27101898182536 968.5274850304507 2 485.2712585330009 MULTI CID FTMS 0 0 0 5194 140013.5 0.4695080271320132 -14 0.1745491027832031 1 Unmodified _TVADKIHSV_ ENSG00000276023|ENST00000617516|DUSP14 38.17557092003332 0.0854718145212029 6 {[TV]|[{I|L}S]}ADK{I|L}HSV 9 0 + 57.487 0.0 0.0 5.9355 5.9355 82.583 0.0 0.0 0.0 34.07019373108585 9.836157191368706 9.836157191368706 3.573381354162805 0 0.9247425010840048 2.0 0.8494850021680094 0.0 + + {[TV]|[{I|L}S]}ADK{I|L}HSV;{[TV]|[{I|L}S]}A[VG]HSV{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}N{I|L}HSV{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}A[HK]DV{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}GG{I|L}HSV{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}ADV[HK]{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}A[{I|L}T][HQ]{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}A[{I|L}T][DP][RP];{[TV]|[{I|L}S]}A[VP][WP]{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}A[VP]{[ET]|[MV]}[RP] 5.9355;5.5665;5.357;4.7867;4.4063;4.1486;3.4973;3.0588;2.7506;2.3121 +;-;-;-;-;-;-;-;-;- + 312 + 1 2.22 77259.9 1.0 603 4590 5194 SUDHL4_400M_050219_2,5195 SUDHL4_400M_050219_2,5195,TVADKIHSV True True TVADKIHSV 23.812853 485.271258533001 2927173.75 5194.0 ENSG00000276023|ENST00000617516|DUSP14 6.8561075528462725 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5200 23.841 800.0 103990.0 25 0 5226.6 -1 GQQFDMLLEMV 11 85 663.8061543017917 1325.597755670383 2 663.8064453005791 MULTI CID FTMS 0 0 0 5199 114500.8828125 0.4327080156298032 -11 0.0934333801269531 1 Oxidation (M) _GQQFDMLLEM(Oxidation (M))V_ ENSG00000138246|ENST00000260818|DNAJC13 21.53697664764585 0.586507868110548 6 {[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F} 13 -1 + 96.544 0.0 0.0 7.2831 7.2831 88.683 0.0 0.0 0.0 7.403626894942448 16.642078980768076 7.403626894942448 6.642078980768076 0 0.9269359821608808 1.3979400086720375 0.0 1.885151878060192 {[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QQNA{M(Oxidation (M))|F};[AG]NA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}AQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}{[MG]|[TS]}A[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};[AG]GQ{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};[AG]GGA{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}{[MG]|[TS]}AQQNA{M(Oxidation (M))|F} 7.2831;6.782;6.7246;6.5987;6.5987;6.5987;6.5184;6.4609;6.4463;6.3382 -;-;-;-;-;-;-;-;-;- 1707 1 2.22 64848.0 0.4300000071525574 604 4594 5199 SUDHL4_400M_050219_2,5200 SUDHL4_400M_050219_2,5200,GQQFDMLLEMV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5203 23.862 800.0 35860.0 25 0 11937.0 -1 0 26 1079.4636043337214 3235.368983601365 3 1079.799731433392 MULTI CID FTMS 0 0 0 5202 99553.6328125 0.8656997014007527 -5 0.0326423645019531 1 6 G 1 -1 3.9794 0.0 0.0 0.123 0.0 0.0 1856.637978817964 1318.6680391901002 3175.3060180080643 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.123 - 1 + 1 2.22 35827.5 0.3300000131130218 605 4596 5202 SUDHL4_400M_050219_2,5203 SUDHL4_400M_050219_2,5203, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5204 23.873 627.0 137330.0 25 0 32533.0 -1 0 77 514.3093215257318 513.3020450591317 1 514.3083984255791 MULTI CID FTMS 0 0 0 5202 118371.3671875 0.8357774358761635 -3 0.0245094299316406 2 6 Y 1 -1 12.764 0.0 0.0 2.4867 0.0 0.0 332.22809899155203 0.0 332.22809899155203 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.4867 - 21 + 1 2.22 73157.9 1.0 606 4596 5202 SUDHL4_400M_050219_2,5204 SUDHL4_400M_050219_2,5204, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5209 23.901 800.0 88854.0 25 0 14199.0 + 18097 KTKEIEQVY 9 100 569.3097146667093 1136.6048764002185 2 569.3107177615166 MULTI CID FTMS 0 0 0 5208 64897.96875 0.1903851918808735 -15 0.1162643432617187 1 Unmodified _KTKEIEQVY_ ENSG00000134283|ENST00000358314|PPHLN1;nc|ENSG00000134283|Q8NEY8-2|PPHLN1;nc|ENSG00000134283|Q8NEY8-3|PPHLN1;nc|ENSG00000134283|Q8NEY8-6|PPHLN1;nc|ENSG00000134283|Q8NEY8-9|PPHLN1;nc|ENSG00000134283|Q8NEY8|PPHLN1 51.629811660486645 0.0367964933207742 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VV[C(Carbamidomethyl (C))K]VY 9 6 + 52.303 0.0 0.0 4.6017 4.6017 73.934 0.0 0.0 0.0 7.654083493581538 14.09256854528806 7.654083493581538 0.7918124604762511 0 1.424742501084005 0.0 1.066901560044258 0.805462187404089 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VV[C(Carbamidomethyl (C))K]VY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}V[C(Carbamidomethyl (C))K]VY;[KA]{[WT]|[RM]}{I|L}EQVY;[KA]{[WT]|[RM]}{I|L}E[AG]VY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VVQ[{I|L}T][HA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}VQ[{I|L}T][HA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VV[WR][HA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}V[WR][HA];[{I|L}T]{[TV]|[{I|L}S]}[KG]EQVY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}VVAA{[TV]|[{I|L}S]}[HA] 4.6017;4.532;3.9282;3.1181;2.2457;2.176;2.0907;2.0211;1.9509;1.8591 -;-;-;-;-;-;-;-;-;- 570 1 2.22 59900.1 0.4799999892711639 607 4600 5208 SUDHL4_400M_050219_2,5209 SUDHL4_400M_050219_2,5209,KTKEIEQVY True True KTKEIEQVY 23.901152 569.310717761517 1230480.25 5208.0 nc|ENSG00000134283|Q8NEY8-9|PPHLN1;;ENSG00000134283|ENST00000358314|PPHLN1;;nc|ENSG00000134283|Q8NEY8-3|PPHLN1;;nc|ENSG00000134283|Q8NEY8-2|PPHLN1;;nc|ENSG00000134283|Q8NEY8|PPHLN1;;nc|ENSG00000134283|Q8NEY8-6|PPHLN1 2.883247370521228 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5215 23.934 800.0 101510.0 25 0 5632.9 -1 VGCIPLTI 8 133 436.7503549572508 871.4861569813016 2 436.7502929568291 MULTI CID FTMS 0 0 0 5214 89788.2578125 0.3311505286123766 -9 0.0711231231689453 1 Carbamidomethyl (C) _VGC(Carbamidomethyl (C))IPLTI_ ENSG00000172209|ENST00000304402|GPR22 20.871210003555333 0.6025813472596342 6 [RV]NVGNT{I|L} 8 -1 + 41.257 0.0 0.0 4.7341 4.7341 84.805 0.0 0.0 0.0 3.777880087412328 31.10690213172679 3.777880087412328 9.262137858390815 0 0.8807196863200843 0.0 0.0 0.2887254899964357 [RV]NVGNT{I|L};[RV]GGVGNT{I|L};[RV]NVGGGT{I|L};[RV]GGVGGGT{I|L};[KG][H{I|L}]{[CT]|[{M(Oxidation (M))|F}G]}T{I|L};[RV]N{[QN]|[E{I|L}]|[KN]}E{I|L};[RV]GG{[QN]|[E{I|L}]|[KN]}E{I|L};[RV][KG][NG]E{I|L} 4.7341;3.6713;3.6713;2.6147;2.2617;1.8208;0.75016;0.12586 -;-;-;-;-;-;-;- 262 1 2.22 66069.3 0.5600000023841858 608 4605 5214 SUDHL4_400M_050219_2,5215 SUDHL4_400M_050219_2,5215,VGCIPLTI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5218 23.943 99.0 507810.0 25 0 68338.0 38019 TPAFFSQTPI 10 84 554.7886078755524 1107.5626628179048 2 554.7876464724541 MULTI CID FTMS 0 0 0 5217 573268.3125 0.6832641462335224 11 -0.1570053100585937 1 Unmodified _TPAFFSQTPI_ ENSG00000158711|ENST00000357992|ELK4 19.361941925380144 0.5226674314761524 6 TP{M(Oxidation (M))|F}K 4 7 28.843 0.0 0.0 2.6042 0.0 0.0 0.0 631.3131197565061 631.3131197565061 -0.6702408682765792 0.0 -0.6702408682765792 0.0 0 0.218765315847925 1.5228787452803376 0.0 0.0 TP{M(Oxidation (M))|F}K 2.6042 - 260 + 1 2.22 44286.3 1.0 609 4607 5217 SUDHL4_400M_050219_2,5218 SUDHL4_400M_050219_2,5218,TPAFFSQTPI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5219 23.956 800.0 120370.0 25 0 9393.2 + 18098 KTKEIEQVY 9 136 379.8756562822721 0 379.8751708865166 PEAK CID FTMS 0 0 0 5217 83931.2421875 0.5750338655112606 -6 0.0367355346679687 2 Unmodified _KTKEIEQVY_ ENSG00000134283|ENST00000358314|PPHLN1;nc|ENSG00000134283|Q8NEY8-2|PPHLN1;nc|ENSG00000134283|Q8NEY8-3|PPHLN1;nc|ENSG00000134283|Q8NEY8-6|PPHLN1;nc|ENSG00000134283|Q8NEY8-9|PPHLN1;nc|ENSG00000134283|Q8NEY8|PPHLN1 17.11289562659939 0.230679707888486 6 V 1 8 6.9897 0.0 0.0 0.92244 0.0 0.0 523.5997795061475 132.04566370181877 655.6454432079662 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.92244 + + 14 + 1 2.22 80730.9 0.6399999856948853 610 4607 5217 SUDHL4_400M_050219_2,5219 SUDHL4_400M_050219_2,5219,KTKEIEQVY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5225 23.99 800.0 28966.0 25 0 2293.5 -1 0 44 694.3140289188103 2079.920257356631 3 694.6476928591728 MULTI CID FTMS 0 0 0 5224 68487.5 0.634105813441938 -3 0.0113334655761718 1 6 Y{[SA]|[TG]}EG[WR] 7 -1 22.803 0.0 0.0 1.0964 0.0 0.0 1212.5726795880876 0.0 1212.5726795880876 0.0 15.813791368665022 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 Y{[SA]|[TG]}EG[WR] 1.0964 - 37 1 2.22 25442.0 0.7799999713897705 611 4612 5224 SUDHL4_400M_050219_2,5225 SUDHL4_400M_050219_2,5225, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5228 24.012 800.0 15758.0 25 0 3319.7 -1 0 17 1026.112214337688 0 1026.111621081829 PEAK CID FTMS 0 0 0 5227 47759.68359375 1.0 0 0.0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.22 20985.4 0.6499999761581421 612 4614 5227 SUDHL4_400M_050219_2,5228 SUDHL4_400M_050219_2,5228, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5230 24.031 800.0 137520.0 25 0 15565.0 + 12457 GTYVSSVPR 9 111 483.2552275650488 964.4959021968976 2 483.2556030154228 MULTI CID FTMS 0 0 0 5229 140056.375 0.7783944244236186 1 -0.0461444854736328 1 Unmodified _GTYVSSVPR_ ENSG00000204252|ENST00000229829|HLA-DOA;ENST00000485901.1_1_6:32974617-32975137:-|nuORF 41.95555342248728 0.0647214845423414 6 {[SA]|[TG]}YVSSVPR 9 0 + 56.13 0.0 0.0 5.8196 5.8196 83.215 0.0 0.0 0.0 18.116742845273063 4.771212547196626 4.771212547196626 4.771212547196626 0 0.6694451763165201 1.0969100130080565 0.25 0.3807196863200844 + + {[SA]|[TG]}YVSSVPR;{[SA]|[TG]}YVSSVRP 5.8196;5.3249 +;- + 122 + 1 2.054 88266.1 0.699999988079071 613 4615 5229 SUDHL4_400M_050219_2,5230 SUDHL4_400M_050219_2,5230,GTYVSSVPR True True GTYVSSVPR 24.030622 483.255603015423 728031.8125 5229.0 ENST00000485901.1_1_6:32974617-32975137:-|nuORF;;ENSG00000204252|ENST00000229829|HLA-DOA 7.838425477345784 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5231 24.044 800.0 57290.0 25 0 3828.5 -1 0 44 1111.639941394329 0 1111.639941394329 PEAK CID FTMS 0 0 0 -1 0 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.054 36851.2 0.4399999976158142 614 4615 5229 SUDHL4_400M_050219_2,5231 SUDHL4_400M_050219_2,5231, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5232 24.058 800.0 29229.0 25 0 9093.5 -1 0 26 1136.4442267831344 0 1136.444628894329 PEAK CID FTMS 0 0 0 5229 80651.0546875 1.0 0 0.0 3 6 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.3078 0.0 0.0 778.2276126465439 1342.5539615846683 2120.7815742312123 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.3078 - 1 + 1 2.054 29637.2 0.4199999868869781 615 4615 5229 SUDHL4_400M_050219_2,5232 SUDHL4_400M_050219_2,5232, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5234 24.074 800.0 142340.0 25 0 21498.0 + 38741 TVADKIHSV 9 125 485.27101898182536 968.5274850304507 2 485.2711059451103 MULTI CID FTMS 0 0 0 5233 63453.44140625 0.2127787684000845 12 -0.2334842681884765 1 Unmodified _TVADKIHSV_ ENSG00000276023|ENST00000617516|DUSP14 30.63653989081413 0.1413794767160703 6 {[TV]|[{I|L}S]}{[HG]|PP}{[VA]|[{I|L}G]}SVTV 10 6 + 39.462 0.0 0.0 4.0744 4.0744 78.559 0.0 0.0 0.0 3.532025228105873 15.988928578538792 3.532025228105873 6.046860534575792 0 0.6331596456423735 2.0 0.2215141619232908 0.0 {[TV]|[{I|L}S]}{[HG]|PP}{[VA]|[{I|L}G]}SVTV;{[TV]|[{I|L}S]}{[DA]|[EG]}[K{I|L}]HSV;{[TV]|[{I|L}S]}{[HG]|PP}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VTV;{[VA]|[{I|L}G]}GV[HT]SVTV;{[TV]|[{I|L}S]}W{I|L}{I|L}[PS]GP;[AG]VV[HT]SVTV;{[VA]|[{I|L}G]}GN[VG][PG]VTV;{[QV]|[N{I|L}]|[RA]|[KV]}V[HT]SVTV;{[VA]|[{I|L}G]}GQAA[PG]VTV;{[VA]|[{I|L}G]}[QA]P{[QG]|[NA]}VTV 4.0744;3.4501;3.4;2.2152;1.66;1.3218;1.269;1.0009;0.93049;0.80405 -;+;-;-;-;-;-;-;-;- + 714 1 2.054 88118.1 0.6299999952316284 616 4616 5233 SUDHL4_400M_050219_2,5234 SUDHL4_400M_050219_2,5234,TVADKIHSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5235 24.076 93.0 486570.0 25 0 83140.0 + 14581 IIAPPERKY 9 58 362.881334326283 1085.622173579049 3 362.8807556033134 MULTI CID FTMS 0 0 0 5233 536375.625 0.2400154043731863 -4 0.0865993499755859 2 Unmodified _IIAPPERKY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2 9.38312468134398 0.5871240394367778 6 PP 2 7 10.969 0.0 0.0 1.0104 0.0 0.0 297.20377859778324 591.2916964166624 888.4954750144457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + PP 1.0104 + + 14 + 1 2.054 43637.8 1.0 617 4616 5233 SUDHL4_400M_050219_2,5235 SUDHL4_400M_050219_2,5235,IIAPPERKY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5236 24.08 181.0 233860.0 25 0 21253.0 + -1 GVPPRCRAL 9 70 513.2894975302916 1024.564442127383 2 513.2889892458916 MULTI CID FTMS 0 0 0 5233 372443.3125 0.8126799828274767 -5 0.0904254913330078 3 Carbamidomethyl (C) _GVPPRC(Carbamidomethyl (C))RAL_ REV__ENSG00000141753|ENST00000269593|IGFBP4 12.531546534597751 0.4974689918368763 6 [VG]PTG 5 -1 47.263 0.0 0.0 4.613 0.0 0.0 0.0 610.3342379205686 610.3342379205686 35.04432191740108 0.0 0.0 0.0 0 0.6549471895720985 2.0 0.0 0.0 [VG]PTG 4.613 - 135 + 1 2.054 39537.2 1.0 618 4616 5233 SUDHL4_400M_050219_2,5236 SUDHL4_400M_050219_2,5236,GVPPRCRAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5237 24.091 655.0 134170.0 25 0 8037.9 14156 IDAHAGGL 8 133 377.19692725172376 752.3793015702475 2 377.1965209841728 MULTI CID FTMS 0 0 0 5233 136281.703125 1.0 0 0.0 4 Unmodified _IDAHAGGL_ ENSG00000172456|ENST00000303721|FGGY;ENST00000495718.5_1_1:59787394-60091722:+|nuORF;nc|ENSG00000172456|Q96C11-2|FGGY;nc|ENSG00000172456|Q96C11-3|FGGY;nc|ENSG00000172456|Q96C11-4|FGGY;nc|ENSG00000172456|Q96C11-5|FGGY 9.347437153973935 0.7675937258251505 6 {[YC]|[HE]}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 6 6 + 19.627 0.0 0.0 2.6086 2.6086 79.68 0.0 0.0 0.0 5.647124887093828 -15.740312677277185 -15.740312677277185 9.420080530223135 0 0.0 0.0 0.7742275032520141 0.0 {[YC]|[HE]}Q{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};{[YC]|[HE]}[AG]{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 2.6086;1.3566 -;- 48 1 2.054 72290.7 1.0 619 4616 5233 SUDHL4_400M_050219_2,5237 SUDHL4_400M_050219_2,5237,IDAHAGGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5240 24.111 800.0 214020.0 25 0 29483.0 + -1 IQRLETMK 8 131 517.7860343471627 0 517.7855712771416 PEAK CID FTMS 0 0 0 5239 177747.203125 0.9286787043585318 1 -0.0576419830322265 1 Oxidation (M) _IQRLETM(Oxidation (M))K_ REV__PPARG|p.D439E|1|0.22|ENSG00000132170|chr3:12433944-12433944|C/A|missense_variant 22.736283301280096 0.3662555986329114 6 KTT[{I|L}P]T 6 -1 41.713 0.0 0.0 4.0359 0.0 0.0 63.99711399162238 325.1634947567975 389.1606087484199 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 1.674742501084005 0.0 KTT[{I|L}P]T 4.0359 - 301 + 1 2.054 133709.7 0.8399999737739563 620 4618 5239 SUDHL4_400M_050219_2,5240 SUDHL4_400M_050219_2,5240,IQRLETMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5241 24.125 800.0 71276.0 25 0 4946.0 + -1 CLCFAPCIAF 10 102 629.7745417547793 1257.5345305763583 2 629.7749511599541 MULTI CID FTMS 0 0 0 5239 106664.2734375 1.0 0 0.0 2 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LC(Carbamidomethyl (C))FAPC(Carbamidomethyl (C))IAF_ REV__ENST00000524227.5_1_8:41518986-41519133:-|nuORF;REV__nc|ENSG00000029534|P16157-14|ANK1;REV__nc|ENSG00000029534|P16157-15|ANK1 12.531546534597751 0.6372748319968624 6 [AG]AHDEAQQNA{M(Oxidation (M))|F} 12 -1 + 70.32 0.0 0.0 5.5919 5.5919 84.299 0.0 0.0 0.0 9.525840394642309 11.382353118286233 9.525840394642309 6.817496819840656 0 0.8935078169319297 1.6989700043360187 0.4247425010840047 0.3807196863200844 [AG]AHDEAQQNA{M(Oxidation (M))|F};[AG]AHDEAQNQA{M(Oxidation (M))|F};[AG]AHDEA[AG]QNA{M(Oxidation (M))|F};[AG]AHDEAQ[AG]NA{M(Oxidation (M))|F};[AG]AHDEAQQGGA{M(Oxidation (M))|F};[QA]HDEAQQNA{M(Oxidation (M))|F};[AG]AHD[DN]VQNA{M(Oxidation (M))|F};[AG]AHDEA[AG]NQA{M(Oxidation (M))|F};[AG]AHDEAQGGQA{M(Oxidation (M))|F};[AG]AHDEAQN[AG]A{M(Oxidation (M))|F} 5.5919;5.0498;4.8684;4.8684;4.8684;4.8344;4.5796;4.3263;4.3263;4.3263 -;-;-;-;-;-;-;-;-;- 1907 1 2.054 47949.2 0.6000000238418579 621 4618 5239 SUDHL4_400M_050219_2,5241 SUDHL4_400M_050219_2,5241,CLCFAPCIAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5242 24.139 800.0 256730.0 25 0 23073.0 + 14583 IIAPPERKY 9 95 543.8181316042893 1085.6217102753783 2 543.8167602419853 MULTI CID FTMS 0 0 0 5239 89256.0390625 0.2029179884571916 -5 0.1052875518798828 3 Unmodified _IIAPPERKY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2 51.629811660486645 0.0367964933207742 6 {I|L}{I|L}APPERKY 9 0 + 92.671 0.0 0.0 8.5362 8.5362 97.001 0.0 0.0 0.0 81.07696055338198 8.738221912761503 8.738221912761503 20.94212497064703 0 0.9247425010840048 2.0 0.3494850021680094 0.8494850021680094 + + {I|L}{I|L}APPERKY;{I|L}{I|L}A[WH]RKY;{I|L}{I|L}[HK]E[VG]KY 8.5362;6.6071;4.7846 +;-;- + 278 + 1 2.054 161056.8 0.6000000238418579 622 4618 5239 SUDHL4_400M_050219_2,5242 SUDHL4_400M_050219_2,5242,IIAPPERKY True True IIAPPERKY 24.138926 543.816760241985 20097614.375 5239.0 ENSG00000143632|ENST00000366684|ACTA1;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000163017|ENST00000345517|ACTG2;;ENSG00000107796|ENST00000224784|ACTA2;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;ENSG00000159251|ENST00000290378|ACTC1;;ENSG00000169067|ENST00000423391|ACTBL2;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENSG00000075624|ENST00000646664|ACTB 4.486903190612793 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5243 24.153 800.0 97002.0 25 0 6847.9 27051 PEQNDRTPL 9 119 535.2664634197479 1068.5183739062957 2 535.2659789919853 MULTI CID FTMS 0 0 0 5239 191060.78125 1.0 0 0.0 4 Unmodified _PEQNDRTPL_ ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;ENST00000544562.5_1_14:23067206-23078652:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4 15.847184025352805 0.4077185912009129 6 [EP]QDTRNP{I|L} 9 3 + 36.217 0.0 0.0 3.3894 3.3894 79.945 0.0 0.0 0.0 20.731976094617536 10.00264211718298 10.00264211718298 9.208187539523747 0 0.0 0.0 0.8494850021680094 0.6203715150305281 [EP]QDTRNP{I|L};[EP]QDTRGGP{I|L};[EP][AG]DTRNP{I|L};[EP]QDT[VG]NP{I|L};[EP][AG]DTRGGP{I|L};[EP][AG]DT[VG]NP{I|L};[EP]QDT[VG]GGP{I|L};[EP]Q{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QNP{I|L};{[WT]|[RM]}RRDQ[HA];{[HG]|PP}C(Carbamidomethyl (C)){[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QNP{I|L} 3.3894;2.5276;2.5276;2.5276;1.67;1.67;1.4457;1.3624;1.3277;0.74581 -;-;-;-;-;-;-;-;-;- 247 + 1 2.054 64507.7 0.8299999833106995 623 4618 5239 SUDHL4_400M_050219_2,5243 SUDHL4_400M_050219_2,5243,PEQNDRTPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5245 24.169 800.0 61834.0 25 0 17887.0 40923 VLSQASSLAVY 11 78 569.3097146667093 1136.6048764002185 2 569.8113891482353 MULTI CID FTMS 0 0 0 5244 29504.689453125 0.1166978908540143 8 -0.1347675323486328 1 Unmodified _VLSQASSLAVY_ ENST00000454741.5_1_22:28396868-28397276:+|nuORF 13.042465956692816 0.7638483625850725 6 S[{I|L}A]VY 5 6 26.51 0.0 0.0 2.3324 0.0 0.0 585.3121650738498 0.0 585.3121650738498 0.0 26.025684359364405 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 + S[{I|L}A]VY 2.3324 + + 34 + 1 2.054 43797.8 0.4600000083446502 624 4619 5244 SUDHL4_400M_050219_2,5245 SUDHL4_400M_050219_2,5245,VLSQASSLAVY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5246 24.172 180.0 336990.0 25 0 41330.0 + 31993 RVGATAAVY 9 70 454.2526332409241 906.4907135486484 2 454.2515136599541 MULTI CID FTMS 0 0 0 5244 264312.375 0.4946302937981355 -3 0.0947017669677734 2 Unmodified _RVGATAAVY_ ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENST00000511203.1_1_4:100869836-100870579:-|nuORF;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;ENST00000511348.1_1_4:100870420-100870579:-|nuORF;nc|ENSG00000105968|Q71UI9-2|H2AZ2;nc|ENSG00000105968|Q71UI9-4|H2AZ2;nc|ENSG00000105968|Q71UI9-5|H2AZ2 18.373094154950223 0.3393451798331396 6 AVY 3 6 36.198 0.0 0.0 3.9932 0.0 0.0 555.311490538308 0.0 555.311490538308 0.0 25.08864383480216 0.0 0.0 0 1.0 0.0 0.0 0.0 + AVY 3.9932 + + 36 1 2.054 51364.7 1.0 625 4619 5244 SUDHL4_400M_050219_2,5246 SUDHL4_400M_050219_2,5246,RVGATAAVY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5247 24.179 360.0 200270.0 25 0 84584.0 + -1 TSSAVTTALK 10 72 490.2829284494583 489.2756519828584 1 490.2824890017509 MULTI CID FTMS 0 0 0 5244 171968.40625 0.8462226723390199 -5 0.1592311859130859 3 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 6 P 1 -1 11.42 0.0 0.0 2.3341 0.0 0.0 374.2119903391068 0.0 374.2119903391068 0.0 -3.317076240139105 -3.317076240139105 0.0 0 0.0 0.0 0.0 0.0 P 2.3341 - 13 + 1 2.054 60672.8 1.0 626 4619 5244 SUDHL4_400M_050219_2,5247 SUDHL4_400M_050219_2,5247, False False TSSAVTTALK 24.178861 490.282489001751 974179.125 5244.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 4.742732127507527 2.0 False 10.0 True splicing PXD020620_cell_line SUDHL4_400M_050219_2 5250 24.199 800.0 169390.0 25 0 48128.0 + 40973 VLYDRQGIGR 10 77 588.8267757896767 1175.6389986461534 2 588.8270751833916 MULTI CID FTMS 0 0 0 5249 109552.8203125 0.7848226711558789 -3 0.0877532958984375 1 Unmodified _VLYDRQGIGR_ ENSG00000168090|ENST00000303904|COPS6 34.93206674587334 0.2110832994570416 6 ARQG{I|L}GR 7 4 30.112 0.0 0.0 2.5613 0.0 0.0 419.1921125150971 0.0 419.1921125150971 0.0 18.85278814585593 0.0 0.0 0 1.1677353201839438 0.0 0.0 0.5994850021680094 ARQG{I|L}GR 2.5613 - 180 + 1 2.054 107166.6 0.5699999928474426 627 4621 5249 SUDHL4_400M_050219_2,5250 SUDHL4_400M_050219_2,5250,VLYDRQGIGR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5251 24.213 800.0 136920.0 25 0 17384.0 + 29851 QQPASGVAY 9 117 460.72639043197455 919.4382279307492 2 460.7260619997978 MULTI CID FTMS 0 0 0 5249 88632.4765625 0.7601210382602629 -3 0.0877532958984375 2 Unmodified _QQPASGVAY_ ENSG00000056097|ENST00000265069|ZFR;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 26.88365393820708 0.1891292719743517 6 [PA]SGVQQAY 9 4 + 27.489 0.0 0.0 2.9897 2.9897 70.67 0.0 0.0 0.0 1.5194812565558848 14.532326928772456 1.5194812565558848 1.4413878832380789 0 0.8935078169319297 0.0 0.6382104921644451 0.2742275032520141 [PA]SGVQQAY;[PA]SGQQVAY;QQVSPQAY;[PA]SGVAGQAY;{[QG]|[NA]}AVSPQAY;[VG]QPTGQAY;[PA]SGVQ[AG]AY;[VG][PG]TQQAY;[VG]QASPQAY;[VG]S[PA]QQAY 2.9897;2.8329;2.3676;2.3641;2.2259;2.1424;1.9882;1.9872;1.7845;1.6598 -;-;-;-;-;-;-;-;-;- 423 1 2.054 92582.9 0.5600000023841858 628 4621 5249 SUDHL4_400M_050219_2,5251 SUDHL4_400M_050219_2,5251,QQPASGVAY False True QQPASGVAY 24.212825 460.726061999798 1052854.0 5249.0 ENSG00000056097|ENST00000265069|ZFR;;ENST00000505366.1_1_5:32406854-32444764:-|nuORF 2.978641708691915 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5254 24.221 65.0 990520.0 25 0 308120.0 + 40974 VLYDRQGIGR 10 60 392.8871199909609 1175.6395305730828 3 392.8867065310478 MULTI CID FTMS 0 0 0 5253 609764.3125 0.9787457841735626 -1 0.0039596557617187 1 Unmodified _VLYDRQGIGR_ ENSG00000168090|ENST00000303904|COPS6 43.77239144664712 0.1177314611616471 6 V{I|L}YDRQ{[QV]|[N{I|L}]|[RA]|[KV]}R 9 2 + 76.877 0.0 0.0 6.5391 6.5391 89.846 0.0 0.0 0.0 61.03540095567041 0.2456819149073652 0.2456819149073652 9.208187539523747 0 0.4247425010840047 2.0 0.0 1.1237125054200234 V{I|L}YDRQ{[QV]|[N{I|L}]|[RA]|[KV]}R;V{I|L}YDR[AG]{[QV]|[N{I|L}]|[RA]|[KV]}R;V{I|L}YD[VG]Q{[QV]|[N{I|L}]|[RA]|[KV]}R 6.5391;5.7559;5.7559 -;-;- 53 + 1 2.054 61439.7 1.0 629 4623 5253 SUDHL4_400M_050219_2,5254 SUDHL4_400M_050219_2,5254,VLYDRQGIGR True True VLYDRQGIGR 24.221494 392.886706531048 3388674.625 5253.0 ENSG00000168090|ENST00000303904|COPS6 6.836125373840332 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5255 24.235 800.0 32531.0 25 0 10102.0 -1 0 27 1181.827342654124 3542.4601985625723 3 1182.159716784954 MULTI CID FTMS 0 0 0 5253 49376.56640625 0.6451574557879557 1 -0.0325126647949218 2 6 G 1 -1 5.4846 0.0 0.0 0.15482 0.0 0.0 2163.750922294798 1318.6726712552315 3482.423593550029 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.15482 - 6 + 1 2.054 34928.7 0.3700000047683716 630 4623 5253 SUDHL4_400M_050219_2,5255 SUDHL4_400M_050219_2,5255, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5256 24.249 800.0 62567.0 25 0 16683.0 -1 0 31 1176.4966704943597 3526.46818208328 3 1176.830249011517 MULTI CID FTMS 0 0 0 5253 81046.5390625 0.0596829683271863 -14 0.256814956665039 3 6 E 1 -1 6.9897 0.0 0.0 0.19821 0.0 0.0 2870.240787485347 524.1597384088499 3394.400525894197 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19821 - 3 + 1 2.054 50472.6 0.3700000047683716 631 4623 5253 SUDHL4_400M_050219_2,5256 SUDHL4_400M_050219_2,5256, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5258 24.266 800.0 32722.0 25 0 2456.6 -1 0 45 694.3140289188103 2079.920257356631 3 694.3152343630791 MULTI CID FTMS 0 0 0 5257 16419.861328125 0.1899267427237931 5 -0.0461082458496093 1 6 TG[WR] 4 -1 15.674 0.0 0.0 0.75359 0.0 0.0 1561.6855573651742 0.0 1561.6855573651742 0.0 10.189549981487076 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 TG[WR] 0.75359 - 16 1 2.054 25798.9 0.4099999964237213 632 4624 5257 SUDHL4_400M_050219_2,5258 SUDHL4_400M_050219_2,5258, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5259 24.279 800.0 51490.0 25 0 9172.5 -1 0 53 939.1328692130317 3752.5023709857264 4 939.3835937380792 MULTI CID FTMS 0 0 0 5257 92340.71875 0.4699996755225677 -6 0.1543350219726562 2 6 YW 2 -1 10.969 0.0 0.0 0.29231 0.0 0.0 1311.4576454992014 2088.9016817682245 3400.359327267426 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YW 0.29231 - 15 + 1 2.054 47473.4 0.3799999952316284 633 4624 5257 SUDHL4_400M_050219_2,5259 SUDHL4_400M_050219_2,5259, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5265 24.312 800.0 116500.0 25 0 44127.0 40257 VGSYLKFPT 9 81 506.2778769457271 0 506.2790099978447 PEAK CID FTMS 0 0 0 5264 83950.1171875 0.6055720144246944 9 -0.1302394866943359 1 Unmodified _VGSYLKFPT_ ENSG00000171310|ENST00000303694|CHST11;nc|ENSG00000171310|Q9NPF2-2|CHST11 4.75600775471527 0.3444685223463735 6 K 1 8 6.9897 0.0 0.0 0.69168 0.0 0.0 215.04603601860416 664.3781832330686 879.4242192516729 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.69168 + + 21 + 1 2.054 78429.1 0.5 634 4629 5264 SUDHL4_400M_050219_2,5265 SUDHL4_400M_050219_2,5265,VGSYLKFPT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5266 24.318 344.0 281840.0 25 0 46017.0 + + 19916 HLDPAVKEV 9 113 504.26243242805 0 504.2626220583916 PEAK CID FTMS 0 0 0 5264 83537.0546875 0.7240378978926963 19 -0.2212696075439453 2 Unmodified _LHYPLTTY_ ENSG00000168438|ENST00000307731|CDC40;ENST00000606893.5_1_6:110501354-110532119:+|nuORF 14.581692164780916 0.4900557725783909 6 YDG 3 -1 15.322 0.0 0.0 1.5223 0.0 0.0 600.3258159285626 68.05121027164296 668.3770262002056 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2134679910804404 0.0 YDG 1.5223 - 67 + 1 2.054 79190.0 1.0 635 4629 5264 SUDHL4_400M_050219_2,5266 SUDHL4_400M_050219_2,5266,LHYPLTTY False False HLDPAVKEV 24.317895 504.262622058392 344520.09375 5264.0 ENSG00000168438|ENST00000307731|CDC40;;ENST00000606893.5_1_6:110501354-110532119:+|nuORF 2.623811642328898 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5269 24.327 119.0 511560.0 25 0 84113.0 + 14582 IIAPPERKY 9 61 362.881334326283 1085.622173579049 3 362.8813049197197 MULTI CID FTMS 0 0 0 5268 425401.1875 0.1903569686609941 11 -0.1197223663330078 1 Unmodified _IIAPPERKY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2 13.042465956692816 0.4836390050082244 6 {I|L}{I|L}AP 4 5 40.445 0.0 0.0 3.7255 0.0 0.0 0.0 688.3418382889049 688.3418382889049 33.4556125503638 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}{I|L}AP 3.7255 + + 22 + 1 2.054 57483.7 1.0 636 4631 5268 SUDHL4_400M_050219_2,5269 SUDHL4_400M_050219_2,5269,IIAPPERKY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5270 24.33 127.0 528360.0 25 0 52620.0 + 42282 VSQVGKEL 8 89 430.24785079340177 858.4811486536036 2 430.2472717165947 MULTI CID FTMS 0 0 0 5268 345988.09375 0.2775057460604708 -11 0.1432228088378906 2 Unmodified _VSQVGKEL_ ENSG00000168209|ENST00000307365|DDIT4 38.17557092003332 0.2648138137323925 6 VSQV 4 4 40.618 0.0 0.0 4.7313 0.0 0.0 0.0 442.2305404404658 442.2305404404658 29.90417829939986 0.0 0.0 0.0 0 0.8935078169319297 1.6989700043360187 0.0 0.0 + VSQV 4.7313 + + 274 + 1 2.054 56791.3 1.0 637 4631 5268 SUDHL4_400M_050219_2,5270 SUDHL4_400M_050219_2,5270,VSQVGKEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5271 24.332 141.0 299970.0 25 0 61697.0 + 35541 STPSSLANSL 10 76 488.750872273417 975.487191613634 2 488.7505676150322 MULTI CID FTMS 0 0 0 5268 184057.203125 0.2321084550676724 -12 0.1693916320800781 3 Unmodified _STPSSLANSL_ REV__nc|ENSG00000157087|Q01814-2|ATP2B2;REV__nc|ENSG00000157087|Q01814-3|ATP2B2;REV__nc|ENSG00000157087|Q01814-4|ATP2B2;REV__nc|ENSG00000157087|Q01814-7|ATP2B2 14.838274106304384 0.5985701837916485 6 {[QN]|[E{I|L}]|[KN]}[MN]RNS{I|L} 8 -1 {[QN]|[E{I|L}]|[KN]}[MN]RN + + 21.454 -0.50136 -0.066198 2.1993 2.1993 50.512 0.0 0.0 0.0 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}[MN]RNS{I|L} 2.1993 - 63 + 1 2.054 38796.8 1.0 638 4631 5268 SUDHL4_400M_050219_2,5271 SUDHL4_400M_050219_2,5271,STPSSLANSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5275 24.357 800.0 48178.0 25 0 2500.6 -1 0 51 1115.162324567925 5570.775240506626 5 1115.764208972454 MULTI CID FTMS 0 0 0 -1 0 1 6 GP 2 -1 10.969 0.0 0.0 0.1969 0.0 0.0 1821.907647499796 3591.8309416420766 5413.738589141873 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GP 0.1969 - 11 + 1 2.054 33604.1 0.2800000011920929 639 4634 5274 SUDHL4_400M_050219_2,5275 SUDHL4_400M_050219_2,5275, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5276 24.368 639.0 133320.0 25 0 15484.0 + 19599 VAAPPPKNSF 10 101 513.2791068464835 1024.543660759767 2 514.2812988162041 MULTI CID FTMS 0 0 0 5274 102386.1171875 0.9500716318564794 -4 0.0224666595458984 2 Unmodified _LGADFLRHP_ ENSG00000165458|ENST00000298229|INPPL1;nc|ENSG00000165458|O15357-2|INPPL1 7.910154910731844 0.6385446671287552 6 {[VA]|[{I|L}G]}A 3 6 22.932 0.0 0.0 2.2382 0.0 0.0 0.0 780.3778642111919 780.3778642111919 11.149088396438156 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 + {[VA]|[{I|L}G]}A 2.2382 + + 149 1 2.054 74350.6 1.0 640 4634 5274 SUDHL4_400M_050219_2,5276 SUDHL4_400M_050219_2,5276,LGADFLRHP False False VAAPPPKNSF 24.367929 514.281298816204 2708686.5 5274.0 ENSG00000165458|ENST00000298229|INPPL1;;nc|ENSG00000165458|O15357-2|INPPL1 6.051419893900554 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5279 24.381 329.0 182150.0 25 0 16001.0 + 647 AELQSPVY 8 89 453.7333693060117 905.4521856788234 2 453.7331115603447 MULTI CID FTMS 0 0 0 5278 78393.3984375 0.5361813992353941 -4 0.0396671295166015 1 Unmodified _AELQSPVY_ REV__ENSG00000138002|ENST00000260570|IFT172;REV__nc|ENSG00000138002|Q9UG01-2|IFT172 15.768221252438446 0.6779680726941459 6 NVY 3 -1 19.922 0.0 0.0 2.2002 0.0 0.0 511.263081530189 0.0 511.263081530189 0.0 9.190840781556206 0.0 0.0 0 0.0 0.0 0.0 0.0 NVY 2.2002 - 90 + 1 2.054 54252.2 1.0 641 4636 5278 SUDHL4_400M_050219_2,5279 SUDHL4_400M_050219_2,5279,AELQSPVY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5280 24.394 800.0 50292.0 25 0 14705.0 -1 0 33 1183.8147903035083 3548.422541510725 3 1184.144824206829 MULTI CID FTMS 0 0 0 5278 99065.53125 0.8767070287558711 -5 0.0500850677490234 2 6 N 1 -1 5.4846 0.0 0.0 0.15456 0.0 0.0 2999.254891219513 432.1124361627563 3431.367327382269 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.15456 - 3 + 1 2.054 42018.7 0.3199999928474426 642 4636 5278 SUDHL4_400M_050219_2,5280 SUDHL4_400M_050219_2,5280, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5281 24.407 710.0 166240.0 25 0 46995.0 14147 ICERLLKE 8 100 502.2830495839116 0 502.2823058962822 PEAK CID FTMS 0 0 0 5278 88971.8125 0.6899258421888338 -46 0.5710391998291016 3 Unmodified _ICERLLKE_ ENSG00000135334|ENST00000257787|AKIRIN2 8.593279151180031 0.5573742999696857 6 V 1 8 0.83746 0.0 0.0 0.083532 0.0 0.0 802.4355164268092 98.0251940362914 900.4607104631006 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.083532 - 1 + 1 2.054 97621.2 1.0 643 4636 5278 SUDHL4_400M_050219_2,5281 SUDHL4_400M_050219_2,5281,ICERLLKE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5283 24.411 46.0 1030100.0 25 0 67808.0 + 12178 GQPREPQVY 9 75 537.27220502126 1072.52985710932 2 537.2721435427666 MULTI CID FTMS 0 0 0 5282 1182525.125 0.8553414986874042 3 -0.0269966125488281 1 Unmodified _GQPREPQVY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 32.78568957990786 0.1150597335874693 6 VY 2 7 25.005 0.0 0.0 2.3314 0.0 0.0 792.3873227849043 0.0 792.3873227849043 0.0 4.732648939256908 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + VY 2.3314 + + 158 + 1 2.054 44809.5 1.0 644 4637 5282 SUDHL4_400M_050219_2,5283 SUDHL4_400M_050219_2,5283,GQPREPQVY True True GQPREPQVY 24.411478 537.272143542767 51098304.0 5282.0 nc|ENSG00000211896|P01857|IGHG1;;nc|ENSG00000211892|P01861-1|IGHG4;;nc|ENSG00000211893|P01859|IGHG2;;nc|ENSG00000211897|P01860-1|IGHG3;;nc|ENSG00000211893|P01859-1|IGHG2;;nc|ENSG00000211892|P01861|IGHG4;;nc|ENSG00000211897|P01860|IGHG3;;nc|ENSG00000211896|P01857-1|IGHG1 7.297131379445394 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 5284 24.426 794.0 100620.0 25 0 23162.0 + 7957 ELSSNPKVEYH 11 87 434.881967049771 0 434.8819457888603 PEAK CID FTMS 0 0 0 5282 77703.25 0.672762692236929 27 -0.2539081573486328 2 Unmodified _ELSSNPKVEYH_ REV__ENSG00000137809|ENST00000315757|ITGA11;REV__nc|ENSG00000137809|Q9UKX5-2|ITGA11 2.735195868890462 0.4761840153648598 6 T 1 -1 5.4846 0.0 0.0 0.63204 0.0 0.0 96.323796304817 667.3529146783811 763.6767109831982 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.63204 - 4 + 1 2.054 67049.8 1.0 645 4637 5282 SUDHL4_400M_050219_2,5284 SUDHL4_400M_050219_2,5284,ELSSNPKVEYH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5291 24.462 800.0 132350.0 25 0 20916.0 + 12451 GTYQPLSTR 9 101 511.76680366931527 1021.5190544054306 2 511.7664672732353 MULTI CID FTMS 0 0 0 5290 71918.96875 0.2371064121769339 -13 0.1278133392333984 1 Unmodified _GTYQPLSTR_ ENSG00000227057|ENST00000374617|WDR46;ENST00000489905.1_1_6:33248421-33255161:-|nuORF 79.59630418116434 0.0176145593575188 6 {[SA]|[TG]}YQP{I|L}STR 9 0 + 69.402 0.0 0.0 6.794 6.794 90.448 0.0 0.0 0.0 57.18341241091368 15.26007408635124 15.26007408635124 9.208187539523747 0 0.555462187404089 0.958607314841775 0.6694451763165201 1.392159058960253 + + {[SA]|[TG]}YQP{I|L}STR;{[SA]|[TG]}Y[AG]P{I|L}STR 6.794;5.8926 +;- + 112 + 1 2.054 86908.2 0.4799999892711639 646 4643 5290 SUDHL4_400M_050219_2,5291 SUDHL4_400M_050219_2,5291,GTYQPLSTR True True GTYQPLSTR 24.462082 511.766467273235 2966911.75 5290.0 ENST00000489905.1_1_6:33248421-33255161:-|nuORF;;ENSG00000227057|ENST00000374617|WDR46 7.972386678059895 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5292 24.471 517.0 193120.0 25 0 30055.0 19745 LGPRNEGALL 10 99 520.2971349717283 1038.5797170102564 2 520.2965576052666 MULTI CID FTMS 0 0 0 5290 103748.4921875 0.3008231574495044 -17 0.1622486114501953 2 Unmodified _LGPRNEGALL_ nc|ENSG00000112078|Q7Z5Y7-2|KCTD20 18.1463463914782 0.5430639438673815 6 {[VA]|[{I|L}G]}PT 4 7 35.718 0.0 0.0 3.4392 0.0 0.0 0.0 667.3541453921941 667.3541453921941 22.619478172486467 0.0 0.0 0.0 0 0.7302046884880937 1.2218487496163564 0.0 0.0 {[VA]|[{I|L}G]}PT 3.4392 - 69 + 1 2.054 81052.1 1.0 647 4643 5290 SUDHL4_400M_050219_2,5292 SUDHL4_400M_050219_2,5292,LGPRNEGALL False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 5295 24.491 800.0 60540.0 25 0 5980.6 + 35059 SQTPNNTVTY 10 86 562.7641800099817 0 562.7641479372978 PEAK CID FTMS 0 0 0 5294 62242.5859375 0.64386255905403 1 -0.0163841247558593 1 Unmodified _SQTPNNTVTY_ ENSG00000131263|ENST00000332687|RLIM;nc|ENSG00000131263|Q9NVW2-2|RLIM 16.149105407346934 0.3281668441439271 6 T 1 9 10.485 0.0 0.0 0.93319 0.0 0.0 841.3921977208037 178.05109583072502 1019.4432935515288 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 + T 0.93319 + + 51 + 1 2.054 44623.2 0.4699999988079071 648 4645 5294 SUDHL4_400M_050219_2,5295 SUDHL4_400M_050219_2,5295,SQTPNNTVTY False True SQTPNNTVTY 24.491467 562.764147937298 361422.5 5294.0 ENSG00000131263|ENST00000332687|RLIM;;nc|ENSG00000131263|Q9NVW2-2|RLIM 5.537489096323649 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5297 24.501 369.0 455150.0 25 0 125890.0 -1 0 58 1176.4966704943597 3526.46818208328 3 1176.830981433392 MULTI CID FTMS 0 0 0 5296 889512.875 0.6550405404024648 9 -0.0714855194091796 1 6 {M(Oxidation (M))|F}G[WY]{I|L} 5 -1 10.713 0.0 0.0 0.3038 0.0 0.0 2000.6897110214904 856.4553927057249 2857.145103727215 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G[WY]{I|L} 0.3038 - 60 + 1 2.054 142339.6 1.0 649 4646 5296 SUDHL4_400M_050219_2,5297 SUDHL4_400M_050219_2,5297, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5298 24.513 681.0 102870.0 25 0 8962.3 + 43580 YADRVKEL 8 92 497.2716501243346 992.5287473154692 2 497.2713500857353 MULTI CID FTMS 0 0 0 5296 87601.984375 0.9071797678122874 -9 0.0847854614257812 2 Unmodified _YADRVKEL_ ENSG00000142945|ENST00000372224|KIF2C;ENSG00000186638|ENST00000402558|KIF24;nc|ENSG00000142945|Q99661-2|KIF2C;nc|ENSG00000186638|Q5T7B8-2|KIF24;nc|ENSG00000186638|Q5T7B8-4|KIF24 36.506200033944 0.2927422953263032 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DRVKE{I|L} 8 0 + 48.395 0.0 0.0 4.876 4.876 89.244 0.0 0.0 0.0 10.431372718143663 29.9004073159891 10.431372718143663 48.39525733766919 0 1.1435078169319297 1.6989700043360187 0.3807196863200844 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DRVKE{I|L} 4.876 + + 77 1 2.054 59929.5 1.0 650 4646 5296 SUDHL4_400M_050219_2,5298 SUDHL4_400M_050219_2,5298,YADRVKEL False True YADRVKEL 24.512528 497.271350085735 397746.96875 5296.0 ENSG00000142945|ENST00000372224|KIF2C;;nc|ENSG00000186638|Q5T7B8-4|KIF24;;nc|ENSG00000142945|Q99661-2|KIF2C;;nc|ENSG00000186638|Q5T7B8-2|KIF24;;ENSG00000186638|ENST00000402558|KIF24 4.007597208023071 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5305 24.543 409.0 99756.0 25 0 13287.0 -1 TVVMTYSI 8 78 465.2370552775384 0 465.2368347048759 PEAK CID FTMS 0 0 0 5304 42243.70703125 0.4746003586540091 1 -0.0098400115966796 1 Oxidation (M) _TVVM(Oxidation (M))TYSI_ ENSG00000137216|ENST00000323267|TMEM63B;nc|ENSG00000137216|Q5T3F8-3|TMEM63B 24.67388899826682 0.3296343502680589 6 G 1 -1 8.8515 0.0 0.0 0.95336 0.0 0.0 299.1829459678248 569.2327974908811 868.415743458706 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 G 0.95336 - 47 + 1 2.054 37496.4 1.0 651 4652 5304 SUDHL4_400M_050219_2,5305 SUDHL4_400M_050219_2,5305,TVVMTYSI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5308 24.563 800.0 45108.0 25 0 11408.0 -1 0 35 1164.7934539148423 3491.358532344728 3 1165.128710925579 MULTI CID FTMS 0 0 0 5307 93266.953125 0.6828660379827813 -6 0.0299587249755859 1 6 E 1 -1 6.9897 0.0 0.0 0.2002 0.0 0.0 2835.1312366425745 524.1613253229124 3359.292561965487 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.2002 - 1 + 1 2.054 38826.2 0.2899999916553497 652 4654 5307 SUDHL4_400M_050219_2,5308 SUDHL4_400M_050219_2,5308, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5313 24.585 390.0 189050.0 25 0 34004.0 -1 0 94 504.26260341079495 503.25532694419496 1 504.2630798220634 MULTI CID FTMS 0 0 0 5312 66187.796875 0.6295847003875437 -9 0.0544910430908203 1 6 AY 2 -1 17.959 0.0 0.0 3.5685 0.0 0.0 251.1446377125528 0.0 251.1446377125528 0.0 4.75895023531386 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 3.5685 - 42 + 1 2.054 65176.4 1.0 653 4658 5312 SUDHL4_400M_050219_2,5313 SUDHL4_400M_050219_2,5313, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5315 24.591 146.0 405280.0 25 0 42209.0 + 42283 VSQVGKEL 8 79 430.24785079340177 858.4811486536036 2 430.2477905154228 MULTI CID FTMS 0 0 0 5314 319679.28125 0.2564043071015542 17 -0.2292385101318359 1 Unmodified _VSQVGKEL_ ENSG00000168209|ENST00000307365|DDIT4 24.99096001346401 0.5185035129578945 6 VSQV 4 4 39.737 0.0 0.0 4.6288 0.0 0.0 0.0 442.2318571280588 442.2318571280588 28.317076240139105 0.0 0.0 0.0 0 0.8935078169319297 1.6989700043360187 0.0 0.0 + VSQV 4.6288 + + 140 + 1 2.054 52719.7 1.0 654 4659 5314 SUDHL4_400M_050219_2,5315 SUDHL4_400M_050219_2,5315,VSQVGKEL False True VSQVGKEL 24.591471 430.247790515423 5587314.5 5314.0 ENSG00000168209|ENST00000307365|DDIT4 4.617127736409505 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5316 24.594 141.0 246610.0 25 0 52726.0 33803 SLDLQSNSI 9 50 488.750872273417 975.487191613634 2 488.7509033083916 MULTI CID FTMS 0 0 0 5314 220392.34375 0.2779294998947403 16 -0.2251720428466797 2 Unmodified _SLDLQSNSI_ ENSG00000167984|ENST00000359128|NLRC3;nc|ENSG00000167984|Q7RTR2-2|NLRC3;nc|ENSG00000167984|Q7RTR2-4|NLRC3 18.1463463914782 0.3454829746528889 6 S{I|L} 2 7 20.005 0.0 0.0 2.0508 0.0 0.0 757.3603585831637 0.0 757.3603585831637 0.0 7.530834337684311 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 + S{I|L} 2.0508 + + 31 + 1 2.054 35321.8 1.0 655 4659 5314 SUDHL4_400M_050219_2,5316 SUDHL4_400M_050219_2,5316,SLDLQSNSI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5317 24.6 328.0 202770.0 25 0 21843.0 + 13270 HINDSAPEV 9 95 491.23522768948544 980.4559024457708 2 491.2353393435478 MULTI CID FTMS 0 0 0 5314 197177.5625 0.4295191314807986 14 -0.2172260284423828 3 Unmodified _HINDSAPEV_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 52.268347100219714 0.0353964759249114 6 [EP][YT]{M(Oxidation (M))|F} 5 9 27.019 0.0 0.0 2.7558 0.0 0.0 0.0 340.1511374346928 340.1511374346928 11.5431621818022 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.4247425010840047 0.0 [EP][YT]{M(Oxidation (M))|F} 2.7558 - 144 1 2.054 55355.0 1.0 656 4659 5314 SUDHL4_400M_050219_2,5317 SUDHL4_400M_050219_2,5317,HINDSAPEV True True HINDSAPEV 24.600252 491.235339343548 2186731.5 5314.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 5.928725719451904 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5318 24.614 800.0 39392.0 25 0 4526.3 6717 EDFVRWYSPRD 11 57 735.341531204436 1468.668509475672 2 735.3398315310478 MULTI CID FTMS 0 0 0 5314 81686.40625 1.0 0 0.0 4 Unmodified _EDFVRWYSPRD_ ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1 4.189502756095605 0.855381588458882 6 DEED 4 9 34.825 0.0 0.0 2.3712 0.0 0.0 962.5240345685562 0.0 962.5240345685562 0.0 24.36788025451873 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 DEED 2.3712 - 37 1 2.054 28567.4 0.3700000047683716 657 4659 5314 SUDHL4_400M_050219_2,5318 SUDHL4_400M_050219_2,5318,EDFVRWYSPRD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5321 24.627 347.0 182580.0 25 0 41283.0 + -1 SEQMTNEK 8 91 491.7126873368778 981.4108217405555 2 491.7126037478447 MULTI CID FTMS 0 0 0 5320 94384.6015625 0.5528092850066102 6 -0.0963039398193359 1 Oxidation (M) _SEQM(Oxidation (M))TNEK_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 20.453626601364224 0.6087503291685402 6 [EP][VG]E[Y{M(Oxidation (M))|F}]AA 9 -1 + 28.965 0.0 0.0 2.9514 2.9514 69.007 0.0 0.0 0.0 0.4524904595219681 8.362176563538654 0.4524904595219681 0.4524904595219681 0 0.6822333069283655 1.5228787452803376 0.7302046884880937 0.0 [EP][VG]E[Y{M(Oxidation (M))|F}]AA;[TP]PSE[Y{M(Oxidation (M))|F}]AA;[EP][VG][Y{M(Oxidation (M))|F}]EAA;[TP]PS[Y{M(Oxidation (M))|F}]EAA;[H{I|L}]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[Y{M(Oxidation (M))|F}]AA;[DN][YR][SG]EAA 2.9514;2.9053;2.8195;2.7734;1.5518;0.6556 -;-;-;-;-;- 135 1 2.054 53638.3 1.0 658 4661 5320 SUDHL4_400M_050219_2,5321 SUDHL4_400M_050219_2,5321,SEQMTNEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5322 24.641 800.0 24615.0 25 0 8213.2 -1 0 26 1136.1118040908732 3405.31358287282 3 1136.447192370892 MULTI CID FTMS 0 0 0 5320 73626.6171875 1.0 0 0.0 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.054 27686.1 0.3000000119209289 659 4661 5320 SUDHL4_400M_050219_2,5322 SUDHL4_400M_050219_2,5322, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5324 24.657 765.0 137110.0 25 0 25818.0 -1 EATPMLKT 8 122 453.7333693060117 905.4521856788234 2 453.7333251833916 MULTI CID FTMS 0 0 0 5323 97851.0625 0.6692645127478308 22 -0.239694595336914 1 Oxidation (M) _EATPM(Oxidation (M))LKT_ ENSG00000153310|ENST00000694912|CYRIB;ENSG00000197872|ENST00000381323|CYRIA;ENST00000469507.1_1_2:16742256-16742729:-|nuORF;ENST00000517801.5_1_8:130863079-130874553:-|nuORF;ENST00000523288.5_1_8:130864395-130891707:-|nuORF;nc|ENSG00000153310|Q9NUQ9-2|CYRIB 21.74664581756881 0.5868176546531598 6 {[CP]|[EA]}TP{I|L}T{M(Oxidation (M))|F}K 8 -1 {[CP]|[EA]}T + + 28.655 8.9524 2.973 3.1648 3.1648 51.861 0.0 0.0 0.0 0.0 11.361730739309056 0.0 0.0 0 0.3054621874040891 0.0 0.25 0.2302046884880938 {[CP]|[EA]}TP{I|L}T{M(Oxidation (M))|F}K 3.1648 - 143 + 1 2.054 83721.9 1.0 660 4662 5323 SUDHL4_400M_050219_2,5324 SUDHL4_400M_050219_2,5324,EATPMLKT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5327 24.666 158.0 358980.0 25 0 20243.0 + 12179 GQPREPQVY 9 82 537.27220502126 1072.52985710932 2 537.2724487185478 MULTI CID FTMS 0 0 0 5326 398504.21875 0.2882452038377435 30 -0.3164043426513672 1 Unmodified _GQPREPQVY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 27.628801355627647 0.1796483985696185 6 VA[KQ]VY 6 6 34.654 0.0 0.0 3.231 0.0 0.0 366.1565485978344 0.0 366.1565485978344 0.0 15.216525140920606 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 VA[KQ]VY 3.231 - 202 + 1 2.054 48364.9 1.0 661 4664 5326 SUDHL4_400M_050219_2,5327 SUDHL4_400M_050219_2,5327,GQPREPQVY False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 5328 24.68 800.0 106560.0 25 0 7594.1 + 35530 STMSTNGIPR 10 126 540.2608481889691 1078.5071434447382 2 540.2618896365166 MULTI CID FTMS 0 0 0 5326 102291.0390625 0.0479727066550843 -15 0.1399459838867187 2 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 79.59630418116434 0.0173986606250113 6 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP 10 2 + 75.628 0.0 0.0 7.0123 7.0123 86.16 0.0 0.0 0.0 7.269987279362624 4.259687322722812 4.259687322722812 4.259687322722812 0 0.7302046884880937 0.0 0.805462187404089 0.9916440611282626 {[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STNG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGGG{I|L}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STNVVQP;{[MG]|[TS]}{M(Oxidation (M))|F}STK[PS]QP;{[MG]|[TS]}{M(Oxidation (M))|F}STRRQP;{[MG]|[TS]}{M(Oxidation (M))|F}STK[{M(Oxidation (M))|F}V]Y;{[MG]|[TS]}{M(Oxidation (M))|F}STGGVVQP;{[MG]|[TS]}{M(Oxidation (M))|F}STNVV[AG]P 7.0123;6.6173;6.1625;5.7676;4.9744;4.4162;4.3688;4.315;4.1247;4.1247 -;+;-;-;-;-;-;-;-;- + 598 + 1 2.054 69965.9 0.4799999892711639 662 4664 5326 SUDHL4_400M_050219_2,5328 SUDHL4_400M_050219_2,5328,STMSTNGIPR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5331 24.701 800.0 209790.0 25 0 15691.0 + 17342 KLWLAPVP 8 151 462.28968983205937 0 462.2897216677666 PEAK CID FTMS 0 0 0 5330 99794.1171875 0.7939866560061243 -1 0.0040664672851562 1 Unmodified _KLWLAPVP_ REV__ENST00000397261.7_1_3:9845656-9848155:+|nuORF 2.577480529830294 0.5910327097116076 6 P 1 -1 5.4846 0.0 0.0 0.59449 0.0 0.0 697.4167687248625 125.07230554752188 822.4890742723844 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.59449 + + 23 + 1 2.054 129127.1 0.4399999976158142 663 4666 5330 SUDHL4_400M_050219_2,5331 SUDHL4_400M_050219_2,5331,KLWLAPVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5332 24.714 800.0 85765.0 25 0 6620.5 -1 EQCDMSFSL 9 105 558.7203608654178 1115.4261687976357 2 558.7203857302666 MULTI CID FTMS 0 0 0 5330 97756.90625 1.0 0 0.0 2 Carbamidomethyl (C) _EQC(Carbamidomethyl (C))DMSFSL_ ENSG00000188629|ENST00000683217|ZNF177 10.823927491677226 0.5436922275383211 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L}V 5 -1 23.764 0.0 0.0 2.1305 0.0 0.0 0.0 572.1107750810917 572.1107750810917 1.8014194271271222 0.0 0.0 0.0 0 0.0 0.0 0.5044321917401079 0.6747425010840047 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{I|L}V 2.1305 - 130 1 2.054 58982.6 0.4699999988079071 664 4666 5330 SUDHL4_400M_050219_2,5332 SUDHL4_400M_050219_2,5332,EQCDMSFSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5334 24.731 800.0 86812.0 25 0 13055.0 + 12452 GTYQPLSTR 9 100 511.76680366931527 1021.5190544054306 2 511.7670165896416 MULTI CID FTMS 0 0 0 5333 76555.6640625 0.252392924330996 11 -0.1200027465820312 1 Unmodified _GTYQPLSTR_ ENSG00000227057|ENST00000374617|WDR46;ENST00000489905.1_1_6:33248421-33255161:-|nuORF 23.78978130925829 0.2284941198415988 6 {[SA]|[TG]}YQP{I|L}{[MG]|[TS]}R 9 0 + 37.334 0.0 0.0 3.6548 3.6548 81.414 0.0 0.0 0.0 26.620661229125112 2.229810748439263 2.229810748439263 9.208187539523756 0 0.2396518287104437 1.0 0.0 0.7302046884880937 + + {[SA]|[TG]}YQP{I|L}{[MG]|[TS]}R;{[SA]|[TG]}Y[AG]P{I|L}{[MG]|[TS]}R 3.6548;2.7533 +;- + 83 + 1 2.054 61384.5 0.4600000083446502 665 4667 5333 SUDHL4_400M_050219_2,5334 SUDHL4_400M_050219_2,5334,GTYQPLSTR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5335 24.741 612.0 97611.0 25 0 9030.9 -1 NEEEEFECYPP 11 86 721.7751726807599 1441.5357924283196 2 721.7751953005791 MULTI CID FTMS 0 0 0 5333 127900.5390625 0.9387860859863691 -7 0.1002731323242187 2 Carbamidomethyl (C) _NEEEEFEC(Carbamidomethyl (C))YPP_ ENSG00000054267|ENST00000264183|ARID4B;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B 13.614867670302877 0.751941774060705 6 {[DA]|[EG]}EEGEEW[PA][Y{M(Oxidation (M))|F}] 12 -1 + 60.561 0.0 0.0 4.2011 4.2011 72.754 0.0 0.0 0.0 11.452728135102475 3.2121122500096533 3.2121122500096533 0.7525749891599531 0 0.0 0.958607314841775 2.66944517631652 0.0 {[DA]|[EG]}EEGEEW[PA][Y{M(Oxidation (M))|F}];{[DA]|[EG]}EGEEEW[PA][Y{M(Oxidation (M))|F}];{[DA]|[EG]}EEGEE[PA]W[Y{M(Oxidation (M))|F}];{[DA]|[EG]}EGEEE[PA]W[Y{M(Oxidation (M))|F}];{[DA]|[EG]}GEEEEW[PA][Y{M(Oxidation (M))|F}];{[DA]|[EG]}GEEEE[PA]W[Y{M(Oxidation (M))|F}];EEGEGEEW[PA][Y{M(Oxidation (M))|F}];EEGGEEEW[PA][Y{M(Oxidation (M))|F}];EEGEGEE[PA]W[Y{M(Oxidation (M))|F}];EEGGEEE[PA]W[Y{M(Oxidation (M))|F}] 4.2011;4.1489;4.0631;4.0109;3.6087;3.4707;3.4066;3.3544;3.2686;3.2164 -;-;-;-;-;-;-;-;-;- 2591 1 2.054 48097.7 1.0 666 4667 5333 SUDHL4_400M_050219_2,5335 SUDHL4_400M_050219_2,5335,NEEEEFECYPP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5338 24.762 800.0 59201.0 25 0 15018.0 -1 0 36 1176.4974353876346 3526.470476763104 3 1176.831469714642 MULTI CID FTMS 0 0 0 5337 83571.34375 0.3672629480307196 -21 0.2289009094238281 1 6 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.26837 0.0 0.0 2000.7250676828287 1318.6715742351005 3319.3966419179296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.26837 - 13 + 1 2.054 49960.5 0.3100000023841858 667 4669 5337 SUDHL4_400M_050219_2,5338 SUDHL4_400M_050219_2,5338, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5339 24.773 656.0 101830.0 25 0 8962.6 + 18245 KVIDQQNGL 9 113 507.7824365113947 1013.5503200895894 2 507.7823974490166 MULTI CID FTMS 0 0 0 5337 98141.9609375 0.8888677795688859 -8 0.1274299621582031 2 Unmodified _KVIDQQNGL_ ENSG00000132383|ENST00000254719|RPA1 34.40172386719151 0.1061884637610825 6 GV{I|L}DQQ{[{M(Oxidation (M))|F}H]|[RQ]} 8 4 36.86 0.0 0.0 3.6367 0.0 0.0 71.07416732002109 0.0 71.07416732002109 0.0 22.88032523080816 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.4247425010840047 GV{I|L}DQQ{[{M(Oxidation (M))|F}H]|[RQ]} 3.6367 - 171 1 2.054 57140.8 1.0 668 4669 5337 SUDHL4_400M_050219_2,5339 SUDHL4_400M_050219_2,5339,KVIDQQNGL True True KVIDQQNGL 24.773309 507.782397449017 502217.25 5337.0 ENSG00000132383|ENST00000254719|RPA1 5.141340414683024 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5342 24.783 160.0 446260.0 25 0 174850.0 -1 0 72 525.2670776559677 524.2598011893676 1 525.2666503787041 MULTI CID FTMS 0 0 0 5341 304648.71875 0.9896578251394124 -2 0.0318851470947265 1 6 {I|L}PQ 3 -1 30.49 0.0 0.0 5.8157 0.0 0.0 168.05385133760825 0.0 168.05385133760825 0.0 20.03205960551832 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.3494850021680094 {I|L}PQ 5.8157 - 34 + 1 2.054 63473.9 1.0 669 4671 5341 SUDHL4_400M_050219_2,5342 SUDHL4_400M_050219_2,5342, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5343 24.788 290.0 225430.0 25 0 126980.0 -1 0 55 454.26188028719656 453.25460382059657 1 454.2618896365166 MULTI CID FTMS 0 0 0 5341 159745.609375 0.7046866257086176 -2 0.0318851470947265 2 6 T 1 -1 1.5938 0.0 0.0 0.35163 0.0 0.0 267.11783731844656 82.06671320133046 349.184550519777 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.35163 - 4 + 1 2.054 57331.4 1.0 670 4671 5341 SUDHL4_400M_050219_2,5343 SUDHL4_400M_050219_2,5343, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5344 24.798 538.0 167570.0 25 0 21909.0 + 22877 SLIDKTTAA 9 105 460.2580381525967 918.5015233719934 2 460.2575256228447 MULTI CID FTMS 0 0 0 5341 89889.7734375 0.5756762233360718 -5 0.0932254791259765 3 Unmodified _LSASTVALGT_ ENSG00000124562|ENST00000244520|SNRPC;ENST00000474635.1_2_6:34730443-34740721:+|nuORF 29.081581746732265 0.3152867722954398 6 {[TV]|[{I|L}S]}{I|L}DEY{I|L} 7 7 36.431 0.0 0.0 3.9664 0.0 0.0 0.0 82.06684290103749 82.06684290103749 18.50711233356286 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}DEY{I|L} 3.9664 - 498 + 1 2.054 74277.5 1.0 671 4671 5341 SUDHL4_400M_050219_2,5344 SUDHL4_400M_050219_2,5344,LSASTVALGT False False SLIDKTTAA 24.797853 460.257525622845 603462.25 5341.0 ENSG00000124562|ENST00000244520|SNRPC;;ENST00000474635.1_2_6:34730443-34740721:+|nuORF 3.627319574356079 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5350 24.83 800.0 155250.0 25 0 20948.0 + 16125 ITSSAVTTALK 11 136 546.3188191844407 1090.623085435681 2 546.3182250857353 MULTI CID FTMS 0 0 0 5349 88719.1328125 0.7593112683352052 -2 0.0081233978271484 1 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 61.08992128646608 0.0647217981198246 6 [{I|L}T][KA]TVASST{I|L} 11 8 + 72.302 0.0 0.0 6.6294 6.6294 91.869 0.0 0.0 0.0 17.119852294477155 34.58210989817281 17.119852294477155 11.695925227640975 0 0.516375387189108 2.0 3.1791746928241125 0.0 [{I|L}T][KA]TVASST{I|L};[{I|L}T][KA]G[{I|L}T]SST{I|L};[{I|L}T][KQ][{I|L}T]SST{I|L};[{I|L}T][KP]RAS[YR];{I|L}HSSAR[KP][VP];{I|L}TS{[HG]|PP}R[KP][VP];[{I|L}T][KA][RP]S[YR];{I|L}TS[RH]G[KP][VP];{I|L}HSS[RP][KA][VP];{I|L}HSS[RP][PG]{I|L}K 6.6294;5.557;4.7027;3.5006;3.4043;3.2884;3.2257;2.8872;2.8779;2.7489 -;-;-;-;-;-;-;-;-;- 1752 1 2.054 98429.7 0.4600000083446502 672 4676 5349 SUDHL4_400M_050219_2,5350 SUDHL4_400M_050219_2,5350,ITSSAVTTALK True True False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 5356 24.86 643.0 148540.0 25 0 26635.0 + 38844 TVIDSQTHY 9 105 532.2551403493945 1062.495727765589 2 532.2554809451103 MULTI CID FTMS 0 0 0 5355 69929.3359375 0.7100252242270296 -2 0.0079460144042968 1 Unmodified _TVIDSQTHY_ ENSG00000166557|ENST00000299705|TMED3 36.12702656103203 0.0967173616627612 6 {[TV]|[{I|L}S]}{I|L}D{[QS]|[NT]}THY 9 0 + 61.348 0.0 0.0 5.774 5.774 77.59 0.0 0.0 0.0 46.74410632329284 11.962724883926654 11.962724883926654 0.5102999566398125 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + + {[TV]|[{I|L}S]}{I|L}D{[QS]|[NT]}THY;{[TV]|[{I|L}S]}{I|L}DC{[NV]|[RG]}HY;{[TV]|[{I|L}S]}{I|L}D[C(Carbamidomethyl (C))R]HY;{[TV]|[{I|L}S]}{I|L}D{[QS]|[NT]}{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]};{[TV]|[{I|L}S]}{I|L}[QA]M{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]};{[TV]|[{I|L}S]}S[QP]M{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]};{[TV]|[{I|L}S]}[QA]{I|L}M{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]};{[TV]|[{I|L}S]}[WY][RD][HS] 5.774;5.7259;5.1643;3.2534;2.5583;2.2749;1.9916;1.2602 +;-;-;-;-;-;-;- + 183 + 1 2.054 76645.4 1.0 673 4681 5355 SUDHL4_400M_050219_2,5356 SUDHL4_400M_050219_2,5356,TVIDSQTHY True True TVIDSQTHY 24.860136 532.25548094511 797577.125 5355.0 ENSG00000166557|ENST00000299705|TMED3 6.990671634674072 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5359 24.88 800.0 32189.0 25 0 10242.0 -1 0 22 1183.4731181305976 3547.397524991993 3 1184.145312488079 MULTI CID FTMS 0 0 0 5358 76453.2265625 0.2363670999848412 -16 0.1496562957763672 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.054 31875.8 0.3000000119209289 674 4683 5358 SUDHL4_400M_050219_2,5359 SUDHL4_400M_050219_2,5359, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5369 24.929 800.0 81749.0 25 0 3326.1 + 12180 GQPREPQVY 9 101 537.27220502126 1072.52985710932 2 537.2720214724541 MULTI CID FTMS 0 0 0 5368 72443.40625 0.0523996068767633 58 -0.9365577697753906 1 Unmodified _GQPREPQVY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 38.17557092003332 0.0854718145212029 6 [RP]E[PG]AGQVY 10 5 + 46.52 0.0 0.0 4.3374 4.3374 79.589 0.0 0.0 0.0 2.7203843191713872 31.631876924332225 2.7203843191713872 6.532125137753432 0 1.1861818737241734 0.0 0.3054621874040891 0.0 [RP]E[PG]AGQVY;[RP]E[PG]QQVY;[RP]E[PG]AG[AG]VY;[RP]E[QP]GQVY;[RP]E[PG]Q[AG]VY;[RP]E[PG]AV{[QG]|[NA]}Y;[RP]E[QP]G[AG]VY;[RP]E{[QG]|[NA]}PQVY;[AG]P[RH]HHVY;[RP]E[QP]V{[QG]|[NA]}Y 4.3374;3.7284;3.483;3.0476;2.8699;2.7956;2.189;2.0766;1.5269;1.5057 -;-;-;-;-;-;-;-;-;- 360 1 2.054 55808.3 0.4699999988079071 675 4692 5368 SUDHL4_400M_050219_2,5369 SUDHL4_400M_050219_2,5369,GQPREPQVY True True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 5370 24.943 800.0 116330.0 25 0 9783.0 + 8855 EYVSSQLGRP 10 107 568.2922417789471 1134.569930624694 2 568.2920410037041 MULTI CID FTMS 0 0 0 5368 82203.890625 0.1367157355773388 -11 0.0661888122558593 2 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 22.736283301280096 0.4578556481593033 6 {M(Oxidation (M))|F}STNG{I|L}RP 8 -1 64.858 0.0 0.0 5.7165 0.0 0.0 244.14193605542363 0.0 244.14193605542363 0.0 43.97178783955842 0.0 0.0 0 0.0 0.0 1.086696871556164 1.0114393726401687 {M(Oxidation (M))|F}STNG{I|L}RP 5.7165 - 507 + 1 2.054 72845.8 0.4600000083446502 676 4692 5368 SUDHL4_400M_050219_2,5370 SUDHL4_400M_050219_2,5370,EYVSSQLGRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5372 24.948 30.0 1163300.0 25 0 139430.0 -1 STMSTNGIPR 10 60 540.2608481889691 1078.5071434447382 2 540.2612182497978 MULTI CID FTMS 0 0 0 5371 924509.75 0.4335788886592177 14 -0.1966972351074218 1 Oxidation (M) _STM(Oxidation (M))STNGIPR_ ENST00000345125.7_1_8:11710176-11718921:-|nuORF;ENST00000353047.10_1_8:11710176-11725594:-|nuORF;ENST00000453527.6_1_8:11710176-11718921:-|nuORF;ENST00000527243.5_1_8:11710176-11719899:-|nuORF;ENST00000530296.5_1_8:11710176-11726410:-|nuORF;ENST00000531089.5_1_8:11710176-11725551:-|nuORF;ENST00000531502.5_1_8:11710176-11725594:-|nuORF;ENST00000532370.1_1_8:11710176-11711001:-|nuORF;ENST00000534510.5_1_8:11710176-11715376:-|nuORF;ENST00000534636.5_1_8:11710176-11725551:-|nuORF 22.65808497894818 0.4596126414678359 6 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR 10 -1 + 38.135 0.0 0.0 3.5359 3.5359 71.639 0.0 0.0 0.0 7.269987279362624 1.249387366082999 1.249387366082999 1.249387366082999 0 0.5 0.0 0.0 0.25 {[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STN{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}PR;{[MG]|[TS]}{M(Oxidation (M))|F}STGG{[VA]|[{I|L}G]}RP;{[MG]|[TS]}{M(Oxidation (M))|F}SV{M(Oxidation (M))|F}[VG][HV];{[MG]|[TS]}{M(Oxidation (M))|F}SV{M(Oxidation (M))|F}[H{I|L}]AA;{[MG]|[TS]}[VS]PN[W{M(Oxidation (M))|F}]AA 3.5359;3.42;2.6862;2.5703;0.56442;0.56442;0.10607 +;-;-;-;-;-;- + 160 + 1 2.054 33199.2 1.0 677 4693 5371 SUDHL4_400M_050219_2,5372 SUDHL4_400M_050219_2,5372,STMSTNGIPR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5373 24.955 409.0 269920.0 25 0 26074.0 + 17123 KLGPAPKTL 9 133 462.79747305158406 923.580393169968 2 462.7972289919853 MULTI CID FTMS 0 0 0 5371 202713.171875 0.747648450105281 11 -0.1360797882080078 2 Unmodified _KLGPAPKTL_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 67.83816525789305 0.0219346420158844 6 {I|L}KG[PA]PKT{I|L} 9 2 + 57.698 0.0 0.0 6.2472 6.2472 82.793 0.0 0.0 0.0 41.68494652779835 11.962724883926654 11.962724883926654 3.0102999566398125 0 2.267220322351953 0.0 1.120371515030528 0.0 {I|L}KG[PA]PKT{I|L};K{I|L}G[PA]PKT{I|L};{I|L}K[QP]PKT{I|L};K{I|L}[QP]PKT{I|L};[K{I|L}]G[PA]PKT{I|L};[K{I|L}][QP]PKT{I|L};[KP][Q{I|L}]PKT{I|L};[{I|L}T][HV]{I|L}KT{I|L};[KP][QP]{I|L}KT{I|L};[QP][K{I|L}]PKT{I|L} 6.2472;5.9213;5.4934;5.1674;4.7711;4.2616;4.2064;3.8823;3.1484;2.8741 -;+;-;-;+;-;-;-;-;- + 457 + 1 2.054 87109.0 1.0 678 4693 5371 SUDHL4_400M_050219_2,5373 SUDHL4_400M_050219_2,5373,KLGPAPKTL True True KLGPAPKTL 24.954958 462.797228991985 5177874.5 5371.0 ENSG00000071794|ENST00000310053|HLTF;;nc|ENSG00000071794|Q14527-2|HLTF 5.104135990142822 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5374 24.956 26.0 1775300.0 25 0 307110.0 -1 FNDPNAKEM 9 65 541.2344968329695 1080.454440732739 2 541.2347289919853 MULTI CID FTMS 0 0 0 5371 1735980.625 0.5824672140443271 -10 0.078744888305664 3 Oxidation (M) _FNDPNAKEM(Oxidation (M))_ ENSG00000056097|ENST00000265069|ZFR 34.93206674587334 0.1032771302489716 6 ANPD{[QD]|[EN]|[WG]|[KD]|[RS]} 6 -1 33.901 0.0 0.0 3.1377 0.0 0.0 422.18266493965 0.0 422.18266493965 0.0 11.232040608115454 0.0 0.0 0 1.0 0.0 0.0 0.0 ANPD{[QD]|[EN]|[WG]|[KD]|[RS]} 3.1377 - 127 1 2.054 39820.5 1.0 679 4693 5371 SUDHL4_400M_050219_2,5374 SUDHL4_400M_050219_2,5374,FNDPNAKEM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5375 24.963 391.0 187000.0 25 0 39121.0 + 12162 GQNAQTMAY 9 105 500.21348102731696 998.412409121434 2 500.2135192751884 MULTI CID FTMS 0 0 0 5371 170098.53125 0.3962366078266141 -11 0.0826339721679687 4 Oxidation (M) _GQNAQTM(Oxidation (M))AY_ ENSG00000009307|ENST00000358528|CSDE1;ENST00000483030.1_1_1:115263111-115268953:-|nuORF;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 44.40701690623563 0.0526327925666318 6 {[QG]|[NA]}NA 4 5 25.801 0.0 0.0 2.5842 0.0 0.0 0.0 625.229064965437 625.229064965437 4.109197342459016 0.0 0.0 0.0 0 0.0 0.958607314841775 0.0 0.9559771852360796 + {[QG]|[NA]}NA 2.5842 + + 193 1 2.054 60932.3 1.0 680 4693 5371 SUDHL4_400M_050219_2,5375 SUDHL4_400M_050219_2,5375,GQNAQTMAY True False GQNAQTMAY 24.963137 500.213519275188 3455513.75 5371.0 nc|ENSG00000009307|O75534-2|CSDE1;;nc|ENSG00000009307|O75534-4|CSDE1;;ENSG00000009307|ENST00000358528|CSDE1;;nc|ENSG00000009307|O75534-3|CSDE1;;ENST00000483030.1_1_1:115263111-115268953:-|nuORF 6.278878688812256 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5376 24.977 800.0 111080.0 25 0 17514.0 -1 ENQQMMKR 8 116 548.7489245470884 1095.4832961609768 2 548.7494384646416 MULTI CID FTMS 0 0 0 5371 86103.84375 0.3518989234879427 -8 0.0582790374755859 5 2 Oxidation (M) _ENQQM(Oxidation (M))M(Oxidation (M))KR_ ENSG00000101350|ENST00000375712|KIF3B;nc|ENSG00000101350|O15066-2|KIF3B 15.847184025352805 0.6768015514314958 6 EQNE 4 -1 38.457 0.0 0.0 3.5105 0.0 0.0 356.2063389291564 236.067682134436 592.2740210635924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.91944517631652 1.1549471895720984 EQNE 3.5105 - 514 + 1 2.054 76843.0 0.449999988079071 681 4693 5371 SUDHL4_400M_050219_2,5376 SUDHL4_400M_050219_2,5376,ENQQMMKR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5379 24.986 73.0 648850.0 25 0 136780.0 + 9773 FNDPNAKEM 9 69 533.2371452870211 1064.459737640842 2 533.2371703982353 MULTI CID FTMS 0 0 0 5378 672614.0 0.4444573665821404 -3 0.0685138702392578 1 Unmodified _FNDPNAKEM_ ENSG00000056097|ENST00000265069|ZFR 41.95555342248728 0.0647214845423414 6 [DN]{M(Oxidation (M))|F}[KS]PD{[QD]|[EN]|[WG]|[KD]|[RS]} 9 7 + 38.623 0.0 0.0 3.6284 3.6284 70.188 0.0 0.0 0.0 0.9594717286145809 15.698624670292894 0.9594717286145809 0.0565842292838496 0 0.5 1.0969100130080565 0.4247425010840047 0.3054621874040891 [DN]{M(Oxidation (M))|F}[KS]PD{[QD]|[EN]|[WG]|[KD]|[RS]};[DN]PA{[HG]|PP}PD{[QD]|[EN]|[WG]|[KD]|[RS]};[DN]P[HK]PD{[QD]|[EN]|[WG]|[KD]|[RS]};{[HG]|PP}[DP]ANPD{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}D[KS]PD{[QD]|[EN]|[WG]|[KD]|[RS]};[DN]PA[YK]D{[QD]|[EN]|[WG]|[KD]|[RS]};[KA]{[YD]|[{M(Oxidation (M))|F}M]}NPD{[QD]|[EN]|[WG]|[KD]|[RS]};[NS][Y{I|L}]NPD{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]AD{[HG]|PP}PD{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DP{[HG]|PP}[{M(Oxidation (M))|F}T]M 3.6284;3.6231;3.4577;3.3981;3.1648;3.0095;2.9928;2.8754;2.8754;2.8274 -;-;-;-;-;-;-;-;-;- 285 1 2.054 44593.6 1.0 682 4695 5378 SUDHL4_400M_050219_2,5379 SUDHL4_400M_050219_2,5379,FNDPNAKEM True True FNDPNAKEM 24.98587 533.237170398235 3345965.5 5378.0 ENSG00000056097|ENST00000265069|ZFR 8.293259620666504 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5380 24.989 139.0 409860.0 25 0 66506.0 + 8960 FANGRSTGL 9 81 461.74042289897375 921.4662928647476 2 461.7405578494072 MULTI CID FTMS 0 0 0 5378 355290.40625 0.5535869454814903 -9 0.092529296875 2 Unmodified _FANGRSTGL_ ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A 19.256988751693697 0.3154191944385105 6 ENAE 4 8 35.182 0.0 0.0 3.8181 0.0 0.0 460.26582534004064 0.0 460.26582534004064 0.0 22.707873810646845 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 ENAE 3.8181 - 65 1 2.054 49074.7 1.0 683 4695 5378 SUDHL4_400M_050219_2,5380 SUDHL4_400M_050219_2,5380,FANGRSTGL False True FANGRSTGL 24.988677 461.740557849407 4462166.0 5378.0 ENSG00000136518|ENST00000429709|ACTL6A;;nc|ENSG00000136518|O96019-2|ACTL6A;;ENSG00000077080|ENST00000160382|ACTL6B 1.370768904685974 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5381 24.997 481.0 156670.0 25 0 26538.0 34145 SLLWRIYSYSY 11 98 484.2511658775397 1449.7316682328192 3 484.2503234744072 MULTI CID FTMS 0 0 0 5378 111262.5234375 1.0 0 0.0 3 Unmodified _SLLWRIYSYSY_ ENSG00000143199|ENST00000367851|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;nc|ENSG00000143199|Q96PN6-3|ADCY10;nc|ENSG00000143199|Q96PN6-4|ADCY10 1.3296431237094175 0.8688745925763601 6 [KG]{I|L}QETE 7 10 22.413 0.0 0.0 1.546 0.0 0.0 0.0 661.3012232467441 661.3012232467441 4.453869454431118 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 [KG]{I|L}QETE 1.546 - 219 1 2.054 64047.8 1.0 684 4695 5378 SUDHL4_400M_050219_2,5381 SUDHL4_400M_050219_2,5381,SLLWRIYSYSY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5384 25.019 800.0 31222.0 25 0 8447.8 -1 0 20 1176.4974353876346 3526.470476763104 3 1177.499316394329 MULTI CID FTMS 0 0 0 5383 49135.859375 0.3290869155223639 9 -0.1170978546142578 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.054 32158.3 0.3199999928474426 685 4697 5383 SUDHL4_400M_050219_2,5384 SUDHL4_400M_050219_2,5384, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5387 25.039 800.0 51144.0 25 0 8721.8 -1 0 41 1123.3668343391653 2244.7191157451307 2 1123.868579089642 MULTI CID FTMS 0 0 0 5386 78879.0 0.4864468124654732 -17 0.1627311706542968 1 6 N 1 -1 3.0989 0.0 0.0 0.13805 0.0 0.0 1705.534375610168 422.12965233847655 2127.6640279486446 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.13805 - 10 + 1 2.054 38588.1 0.3300000131130218 686 4699 5386 SUDHL4_400M_050219_2,5387 SUDHL4_400M_050219_2,5387, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5388 25.045 309.0 194640.0 25 0 60107.0 + 12161 GQNAQTMAY 9 83 492.2160129847285 982.417473036257 2 492.2162048220634 MULTI CID FTMS 0 0 0 5386 151586.1875 1.0 0 0.0 2 Unmodified _GQNAQTMAY_ ENSG00000009307|ENST00000358528|CSDE1;ENST00000483030.1_1_1:115263111-115268953:-|nuORF;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 16.942295170755138 0.3780752226737986 6 AY 2 7 20.969 0.0 0.0 2.1344 0.0 0.0 730.306585440357 0.0 730.306585440357 0.0 0.7660625688767198 0.0 0.0 0 0.0 0.0 0.0 0.0 + AY 2.1344 + + 72 + 1 2.054 50964.1 1.0 687 4699 5386 SUDHL4_400M_050219_2,5388 SUDHL4_400M_050219_2,5388,GQNAQTMAY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5389 25.05 290.0 274180.0 25 0 38794.0 + -1 ILDALFMG 8 107 448.23523354877193 894.4559141643439 2 448.2352477908134 MULTI CID FTMS 0 0 0 5386 118425.515625 0.0884115759308791 -13 0.1343154907226562 3 Oxidation (M) _ILDALFM(Oxidation (M))G_ REV__ENSG00000169432|ENST00000642356|SCN9A;REV__nc|ENSG00000169432|Q15858-2|SCN9A;REV__nc|ENSG00000169432|Q15858-3|SCN9A;REV__nc|ENSG00000169432|Q15858-4|SCN9A 34.18733598223924 0.3315367612694167 6 {I|L}{I|L}DAN 5 -1 61.102 0.0 0.0 6.8312 0.0 0.0 0.0 365.1577242486938 365.1577242486938 45.23841585426936 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.4247425010840047 0.0 {I|L}{I|L}DAN 6.8312 - 149 + 1 2.054 66827.6 1.0 688 4699 5386 SUDHL4_400M_050219_2,5389 SUDHL4_400M_050219_2,5389,ILDALFMG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5393 25.075 800.0 26760.0 25 0 7812.4 -1 0 29 1105.117198136211 3312.3297650088334 3 1105.789111316204 MULTI CID FTMS 0 0 0 5392 21688.634765625 0.2846469849453616 1 -0.0164031982421875 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.054 27064.7 0.3199999928474426 689 4702 5392 SUDHL4_400M_050219_2,5393 SUDHL4_400M_050219_2,5393, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5396 25.088 365.0 194790.0 25 0 24640.0 11928 GMGGGRVV 8 97 366.69338549830553 731.3722180634111 2 366.6920959353447 MULTI CID FTMS 0 0 0 5395 134413.421875 0.3721590641161849 -8 0.0816707611083984 1 Unmodified _GMGGGRVV_ ENSG00000178965|ENST00000326665|ERICH3;ENST00000433746.2_1_1:75036803-75045091:-|nuORF;nc|ENSG00000178965|Q5RHP9-2|ERICH3 0.7936320650641473 0.8195151834710337 6 S{I|L} 2 8 44.464 0.0 0.0 6.0795 0.0 0.0 0.0 528.2313825467975 528.2313825467975 27.25772496747986 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 S{I|L} 6.0795 - 70 + 1 2.054 59809.5 1.0 690 4704 5395 SUDHL4_400M_050219_2,5396 SUDHL4_400M_050219_2,5396,GMGGGRVV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5397 25.1 720.0 158080.0 25 0 15272.0 + -1 RMLPHAPGV 9 117 497.2684189638632 992.5222849945264 2 497.2700073122978 MULTI CID FTMS 0 0 0 5395 98270.703125 0.2796841675545776 -10 0.1018486022949218 2 Oxidation (M) _RM(Oxidation (M))LPHAPGV_ ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;ENSG00000116478|ENST00000373548|HDAC1 23.1484247019978 0.2366544122328345 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[R{M(Oxidation (M))|F}]APR 8 -1 + 25.053 0.0 0.0 2.5242 2.5242 80.137 0.0 0.0 0.0 2.408037477650637 7.094465368295886 2.408037477650637 10.926003480513485 0 1.218765315847925 0.0 0.0 0.2742275032520141 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}[R{M(Oxidation (M))|F}]APR;[WR][PG][QP]P[VG];[WR][PG][QP]V[PG];[WR][PG][PG]AP[VG];[WR][PG][PG]AV[PG] 2.5242;1.4234;1.2177;1.0251;0.81949 -;-;-;-;- 264 1 2.054 88256.8 1.0 691 4704 5395 SUDHL4_400M_050219_2,5397 SUDHL4_400M_050219_2,5397,RMLPHAPGV False False RMLPHAPGV 25.100447 497.270007312298 4837212.5 5395.0 ENSG00000196591|ENST00000519065|HDAC2;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 6.815731048583984 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5398 25.114 800.0 71241.0 25 0 6654.4 -1 0 88 692.6183200381282 2074.8331307145845 3 692.6185790896416 MULTI CID FTMS 0 0 0 5395 71949.84375 0.2120433986291011 -8 0.0816707611083984 3 6 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TEE{NN|[MP]|[D{I|L}]|[EV]}HWAHE{[CP]|[EA]}EVH 17 -1 + 112.09 0.0 0.0 5.4024 5.4024 90.629 0.0 0.0 0.0 97.62720473575422 16.726410656136693 16.726410656136693 30.47228775315752 0 2.9604093769761874 0.0 1.6989700043360187 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TEE{NN|[MP]|[D{I|L}]|[EV]}HWAHE{[CP]|[EA]}EVH;{[YC]|[HE]}V{[MS]|[{M(Oxidation (M))|F}A]}EHAWH{NN|[MP]|[D{I|L}]|[EV]}EET[EP] 5.4024;3.9338 -;- 886 + 1 2.054 49044.7 0.3799999952316284 692 4704 5395 SUDHL4_400M_050219_2,5398 SUDHL4_400M_050219_2,5398, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5401 25.126 255.0 342360.0 25 0 53319.0 + 14584 IIAPPERKY 9 82 362.8814994236696 1085.6226688712088 3 362.8813354372978 MULTI CID FTMS 0 0 0 5400 273467.9375 0.9656193896861258 -1 0.0040664672851562 1 Unmodified _IIAPPERKY_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2 13.042465956692816 0.4836390050082244 6 {I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}P 5 6 23.468 0.0 0.0 2.1617 0.0 0.0 0.0 475.2558982714642 475.2558982714642 1.7609125905568137 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}P 2.1617 - 55 1 2.054 77734.2 1.0 693 4706 5400 SUDHL4_400M_050219_2,5401 SUDHL4_400M_050219_2,5401,IIAPPERKY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5402 25.139 800.0 45266.0 25 0 11911.0 -1 0 28 1183.4731181305976 3547.397524991993 3 1184.138354480267 MULTI CID FTMS 0 0 0 5400 97651.3828125 0.3019045134220877 7 -0.0973415374755859 2 6 Y 1 -1 5.4846 0.0 0.0 0.15461 0.0 0.0 1311.482682317968 2069.8499239557245 3381.3326062736924 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.15461 - 1 + 1 2.054 38713.1 0.3700000047683716 694 4706 5400 SUDHL4_400M_050219_2,5402 SUDHL4_400M_050219_2,5402, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5406 25.163 756.0 119590.0 25 0 8955.2 17466 KPEGTPQRI 9 121 513.2903550169011 1024.566157100602 2 513.2916137576103 MULTI CID FTMS 0 0 0 5405 61698.6953125 0.651432354970832 1 -0.0156421661376953 1 Unmodified _KPEGTPQRI_ ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A 21.53697664764585 0.2571576504437394 6 [VG]PTG 5 7 45.939 0.0 0.0 4.4837 0.0 0.0 0.0 610.3275850885374 610.3275850885374 30.10132365724756 0.0 0.0 0.0 0 0.7215141619232908 2.0 0.0 0.0 [VG]PTG 4.4837 - 243 + 1 2.054 74646.4 1.0 695 4709 5405 SUDHL4_400M_050219_2,5406 SUDHL4_400M_050219_2,5406,KPEGTPQRI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5409 25.185 800.0 104040.0 25 0 5012.0 + 12181 GQPREPQVY 9 120 537.2721311166049 1072.5297093000097 2 537.2718994021416 MULTI CID FTMS 0 0 0 5408 128090.6484375 0.698262266093938 3 -0.0888748168945312 1 Unmodified _GQPREPQVY_ nc|ENSG00000211892|P01861-1|IGHG4;nc|ENSG00000211892|P01861|IGHG4;nc|ENSG00000211893|P01859-1|IGHG2;nc|ENSG00000211893|P01859|IGHG2;nc|ENSG00000211896|P01857-1|IGHG1;nc|ENSG00000211896|P01857|IGHG1;nc|ENSG00000211897|P01860-1|IGHG3;nc|ENSG00000211897|P01860|IGHG3 39.94969957227396 0.0757326808254658 6 {[QG]|[NA]}[RP]E[QP]VY 9 0 + 37.959 0.0 0.0 3.5392 3.5392 71.236 0.0 0.0 0.0 0.9911824249442917 10.735872108570938 0.9911824249442917 0.9911824249442917 0 1.3494850021680094 0.7695510786217261 0.0 0.7614393726401688 + + {[QG]|[NA]}[RP]E[QP]VY;[AG]G[RP]E[QP]VY;[RP]E[QP]VGQY;[AG]P[RH]HHVY;[RP]E[QP]{[QG]|[NA]}VY;[AG]P{[NV]|[RG]}E[QP]VY;{[QG]|[NA]}[RP]E[VP]QY;[RP]E[QP]VG[AG]Y;[AG]G[RP]E[VP]QY;[RP]E{[QG]|[NA]}[QP]VY 3.5392;3.4468;2.9228;2.4619;2.4619;2.4193;2.1365;2.0643;2.0441;1.8102 +;-;-;-;-;-;-;-;-;- + 378 1 2.054 71528.5 0.550000011920929 696 4711 5408 SUDHL4_400M_050219_2,5409 SUDHL4_400M_050219_2,5409,GQPREPQVY True True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 5410 25.19 284.0 289390.0 25 0 112230.0 -1 0 65 406.22524568527854 405.21796921867855 1 406.2247192263603 MULTI CID FTMS 0 0 0 5408 197413.765625 0.7760748679190395 8 -0.2530994415283203 2 6 HH{I|L} 3 -1 HH + + 14.604 1.0033 0.366 3.604 3.604 52.981 0.0 0.0 0.0 0.0 14.604093769761874 0.0 0.0 0 0.0 0.0 0.0 0.0 HH{I|L} 3.604 - 4 + 1 2.054 69587.2 1.0 697 4711 5408 SUDHL4_400M_050219_2,5410 SUDHL4_400M_050219_2,5410, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5411 25.202 651.0 167120.0 25 0 16523.0 + 43793 YENEVALRQ 9 137 561.2832367847004 1120.5519206362007 2 561.2828857302666 MULTI CID FTMS 0 0 0 5408 108919.4140625 0.6184491241574206 -2 0.0197086334228515 3 Unmodified _YENEVALRQ_ CON__P13645;ENSG00000186395|ENST00000269576|KRT10 59.36838082759317 0.0264317782606298 6 YENEVA{I|L}RQ 9 0 + 105.46 0.0 0.0 9.4115 9.4115 94.278 0.0 0.0 0.0 36.47817481888637 10.515384402724592 10.515384402724592 9.208187539523747 0 1.110924374808178 2.0 0.3494850021680094 1.305462187404089 + + YENEVA{I|L}RQ;YEGGEVA{I|L}RQ;YENEVA[{I|L}A]{[NV]|[RG]};YENEV[RV]{[NV]|[RG]};YEGGEVA[{I|L}A]{[NV]|[RG]};YEGGEV[RV]{[NV]|[RG]};YEN[W{I|L}][{I|L}A]{[NV]|[RG]};[HQ]T[HM]A{I|L}RQ;[HQ]M[HT]A{I|L}RQ;[{I|L}P][Y{I|L}][HT]SQY 9.4115;8.5897;6.9518;6.3688;6.1339;5.5471;4.7308;1.9499;1.6813;0.61958 +;-;-;-;-;-;-;-;-;- + 389 + 1 2.054 84079.3 1.0 698 4711 5408 SUDHL4_400M_050219_2,5411 SUDHL4_400M_050219_2,5411,YENEVALRQ True True YENEVALRQ 25.201582 561.282885730267 609089.125 5408.0 ENSG00000186395|ENST00000269576|KRT10;;P13645 7.035305023193359 2.0 True 9.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_2 5413 25.207 116.0 353950.0 25 0 33494.0 + 8858 EYVSSQLGRP 10 68 568.2925906774915 0 568.2923461794853 PEAK CID FTMS 0 0 0 5412 466522.0625 1.0 0 0.0 1 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 22.736283301280096 0.276231959287006 6 {M(Oxidation (M))|F}STNG{I|L}R 7 -1 42.555 0.0 0.0 3.7508 0.0 0.0 244.14275241494727 112.04062830142811 356.18338071637544 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.7302046884880937 {M(Oxidation (M))|F}STNG{I|L}R 3.7508 - 141 + 1 2.054 34989.9 1.0 699 4712 5412 SUDHL4_400M_050219_2,5413 SUDHL4_400M_050219_2,5413,EYVSSQLGRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5414 25.216 511.0 229510.0 25 0 52824.0 + 2179 AQAPAQSQF 9 115 474.2331211299969 946.4516893267936 2 474.2328369021416 MULTI CID FTMS 0 0 0 5412 127448.3046875 1.0 0 0.0 2 Unmodified _AQAPAQSQF_ ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP 26.88365393820708 0.1891292719743517 6 [QA]PAA 5 5 21.268 0.0 0.0 2.2471 0.0 0.0 0.0 505.2061503465781 505.2061503465781 10.298859261803983 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7059771852360797 [QA]PAA 2.2471 - 198 1 2.054 95605.9 1.0 700 4712 5412 SUDHL4_400M_050219_2,5414 SUDHL4_400M_050219_2,5414,AQAPAQSQF False True AQAPAQSQF 25.215686 474.232836902142 1299355.125 5412.0 ENSG00000005339|ENST00000262367|CREBBP;;nc|ENSG00000005339|Q92793-2|CREBBP 4.209392229715983 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5416 25.22 70.0 474220.0 25 0 69642.0 + 9770 FNDPNAKEM 9 59 541.2344968329695 1080.454440732739 2 541.2346069216728 MULTI CID FTMS 0 0 0 5415 479125.15625 0.160759106939624 10 -0.2583389282226562 1 Oxidation (M) _FNDPNAKEM(Oxidation (M))_ ENSG00000056097|ENST00000265069|ZFR 40.23920728925047 0.0741434193262949 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DPNAKE{M(Oxidation (M))|F} 9 0 + 41.538 0.0 0.0 3.8445 3.8445 81.27 0.0 0.0 0.0 23.88621229653701 10.959924024478129 10.959924024478129 9.208187539523747 0 0.4247425010840047 0.0 0.0 0.0 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DPNAKE{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}DPGGAKE{M(Oxidation (M))|F};[QT][YT]NPD{[QD]|[EN]|[WG]|[KD]|[RS]};[QT][YT]GGPD{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}YYAKE{M(Oxidation (M))|F} 3.8445;2.9922;2.3511;1.4988;1.395 +;-;-;-;- + 131 + 1 2.054 32837.5 1.0 701 4713 5415 SUDHL4_400M_050219_2,5416 SUDHL4_400M_050219_2,5416,FNDPNAKEM True False FNDPNAKEM 25.220471 541.234606921673 26086748.0 5415.0 ENSG00000056097|ENST00000265069|ZFR 10.325549284617106 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5417 25.231 578.0 138860.0 25 0 19942.0 8294 EQNGGYGSATL 11 115 548.7489245470884 1095.4832961609768 2 548.7492553591728 MULTI CID FTMS 0 0 0 5415 128159.609375 0.5237771812445685 12 -0.2670459747314453 2 Unmodified _EQNGGYGSATL_ ENSG00000178950|ENST00000314167|GAK;ENST00000504435.1_1_4:882633-887812:-|nuORF;nc|ENSG00000178950|O14976-2|GAK 17.11289562659939 0.6791789249425932 6 EQNE 4 8 38.457 0.0 0.0 3.5105 0.0 0.0 356.2073580662714 236.06775842838127 592.2751164946527 0.0 0.0 0.0 0.0 0 0.0 0.0 0.91944517631652 1.1549471895720984 EQNE 3.5105 - 609 + 1 2.054 69645.6 1.0 702 4713 5415 SUDHL4_400M_050219_2,5417 SUDHL4_400M_050219_2,5417,EQNGGYGSATL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5418 25.238 444.0 160510.0 25 0 35799.0 -1 GQNAQTMAY 9 96 500.21348102731696 998.412409121434 2 500.2133972048759 MULTI CID FTMS 0 0 0 5415 175185.328125 0.4080860642777733 9 -0.2419567108154297 3 Oxidation (M) _GQNAQTM(Oxidation (M))AY_ ENSG00000009307|ENST00000358528|CSDE1;ENST00000483030.1_1_1:115263111-115268953:-|nuORF;nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1 30.22481116460888 0.1466181017706357 6 {[QG]|[NA]}NA 4 -1 23.214 0.0 0.0 2.3251 0.0 0.0 0.0 625.2295227291089 625.2295227291089 2.2450544571535502 0.0 0.0 0.0 0 0.0 0.5528419686577808 0.0 0.9269359821608808 {[QG]|[NA]}NA 2.3251 + + 129 1 2.054 58694.3 1.0 703 4713 5415 SUDHL4_400M_050219_2,5418 SUDHL4_400M_050219_2,5418,GQNAQTMAY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5419 25.242 202.0 267560.0 25 0 54021.0 + 19153 LEDEKPDGA 9 86 487.2271910885371 972.4398292438742 2 487.2277709841728 MULTI CID FTMS 0 0 0 5415 107580.8828125 0.2930700895013535 -18 0.2346000671386718 4 Unmodified _LEDEKPDGA_ REV__ENSG00000197321|ENST00000355867|SVIL;REV__ENST00000422642.6_2_10:30987145-31001569:+|nuORF;REV__nc|ENSG00000197321|O95425-2|SVIL;REV__nc|ENSG00000197321|O95425-3|SVIL;REV__nc|ENSG00000197321|O95425-4|SVIL 7.910154910731844 0.6385446671287552 6 {I|L}{I|L}PP 4 -1 40.445 0.0 0.0 4.1592 0.0 0.0 0.0 549.1459444635374 549.1459444635374 27.971062485323515 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}PP 4.1592 - 36 + 1 2.054 46317.3 1.0 704 4713 5415 SUDHL4_400M_050219_2,5419 SUDHL4_400M_050219_2,5419,LEDEKPDGA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5420 25.256 800.0 161280.0 25 0 18989.0 9356 FIMHHCASL 9 127 529.7473810076895 1057.4802090821788 2 529.7474243044853 MULTI CID FTMS 0 0 0 5415 106939.0234375 0.3620386559099059 -4 0.0680828094482421 5 Unmodified _FIMHHCASL_ ENSG00000152078|ENST00000370203|TLCD4 18.13498045792455 0.3457906370836843 6 [DN]SSSQ 6 8 26.845 0.0 0.0 2.5386 0.0 0.0 0.0 436.2302950494751 436.2302950494751 2.420299789533402 0.0 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 [DN]SSSQ 2.5386 - 425 + 1 2.054 101110.1 0.4900000095367431 705 4713 5415 SUDHL4_400M_050219_2,5420 SUDHL4_400M_050219_2,5420,FIMHHCASL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5422 25.274 800.0 169220.0 25 0 14652.0 + 961 AFMELAAGL 9 133 461.74042289897375 921.4662928647476 2 461.7404662966728 MULTI CID FTMS 0 0 0 5421 103028.421875 0.1605311833931897 10 -0.2217292785644531 1 Unmodified _AFMELAAGL_ REV__ENSG00000120318|ENST00000239440|ARAP3;REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3 26.34127834903884 0.1960301806784604 6 A[RD]QNAE 7 -1 43.231 0.0 0.0 4.6916 0.0 0.0 119.07381636787264 0.0 119.07381636787264 0.0 28.774874814254623 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 A[RD]QNAE 4.6916 - 168 1 2.054 108197.0 0.5199999809265137 706 4714 5421 SUDHL4_400M_050219_2,5422 SUDHL4_400M_050219_2,5422,AFMELAAGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5423 25.276 120.0 756640.0 25 0 139950.0 + 1774 ALSDGVHKI 9 80 470.2669479347852 938.5193429363704 2 470.2674133181572 MULTI CID FTMS 0 0 0 5421 521161.53125 0.7622011737331236 -2 0.0546035766601562 2 Unmodified _ALSDGVHKI_ ENSG00000158234|ENST00000360570|FAIM;ENST00000470889.5_1_3:138329799-138348004:+|nuORF;ENST00000491175.1_1_3:138340270-138348004:+|nuORF;nc|ENSG00000158234|Q9NVQ4-2|FAIM;nc|ENSG00000158234|Q9NVQ4|FAIM 22.736283301280096 0.2418982879461534 6 [{I|L}A]SDRH 6 4 51.956 0.0 0.0 5.5359 0.0 0.0 0.0 256.1668795221313 256.1668795221313 41.118091581659854 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 [{I|L}A]SDRH 5.5359 - 219 + 1 2.054 76871.7 1.0 707 4714 5421 SUDHL4_400M_050219_2,5423 SUDHL4_400M_050219_2,5423,ALSDGVHKI False True ALSDGVHKI 25.27636 470.267413318157 2391733.0 5421.0 ENST00000491175.1_1_3:138340270-138348004:+|nuORF;;nc|ENSG00000158234|Q9NVQ4|FAIM;;nc|ENSG00000158234|Q9NVQ4-2|FAIM;;ENSG00000158234|ENST00000360570|FAIM;;ENST00000470889.5_1_3:138329799-138348004:+|nuORF 4.821560859680176 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5424 25.279 152.0 465790.0 25 0 64687.0 + 11708 GLGPPGRSV 9 79 420.24044350384975 838.4663340744995 2 420.2401000857353 MULTI CID FTMS 0 0 0 5421 355748.0625 0.525163950859813 -4 0.0929412841796875 3 Unmodified _GLGPPGRSV_ ENSG00000179119|ENST00000336349|SPTY2D1;ENST00000536336.5_1_11:18633859-18655855:-|nuORF;nc|ENSG00000179119|Q68D10-2|SPTY2D1 17.11289562659939 0.3734572693229295 6 {[VA]|[{I|L}G]}GPP 5 4 45.388 0.0 0.0 5.4132 0.0 0.0 0.0 414.2117098443969 414.2117098443969 26.602196946754045 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.0 0.0 + {[VA]|[{I|L}G]}GPP 5.4132 + + 87 + 1 2.054 62892.6 1.0 708 4714 5421 SUDHL4_400M_050219_2,5424 SUDHL4_400M_050219_2,5424,GLGPPGRSV False True GLGPPGRSV 25.279368 420.240100085735 4563693.5 5421.0 ENSG00000179119|ENST00000336349|SPTY2D1;;nc|ENSG00000179119|Q68D10-2|SPTY2D1;;ENST00000536336.5_1_11:18633859-18655855:-|nuORF 2.244592229525248 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5426 25.293 654.0 117340.0 25 0 19871.0 -1 0 52 1123.3668343391653 2244.7191157451307 2 1123.365893542767 MULTI CID FTMS 0 0 0 5425 181994.78125 1.0 0 0.0 1 6 C 1 -1 5.4846 0.0 0.0 0.24433 0.0 0.0 1370.8686041257931 767.8152559869749 2138.683860112768 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.24433 - 24 + 1 2.054 63280.9 1.0 709 4715 5425 SUDHL4_400M_050219_2,5426 SUDHL4_400M_050219_2,5426, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5427 25.307 800.0 114550.0 25 0 7794.8 + 17124 KLGPAPKTL 9 117 462.79747305158406 923.580393169968 2 462.7971984744072 MULTI CID FTMS 0 0 0 5425 93694.7421875 0.3455657475612586 33 -0.5493144989013672 2 Unmodified _KLGPAPKTL_ ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF 47.594388314883695 0.0456443387682827 6 K{I|L}[QP]PKT{I|L} 8 2 + 37.227 0.0 0.0 4.0308 4.0308 79.535 0.0 0.0 0.0 26.68108734954757 3.6729365852036153 3.6729365852036153 7.612492023567619 0 1.832129649978392 0.0 0.7302046884880937 0.0 K{I|L}[QP]PKT{I|L};[K{I|L}][QP]PKT{I|L};[KP][Q{I|L}]PKT{I|L};[K{I|L}]G[PA]PKT{I|L};[K{I|L}][QP]PTK{I|L};[KP]T[QP]{I|L}K{I|L};[K{I|L}][Y{M(Oxidation (M))|F}]{I|L}K{I|L};[KP][Q{I|L}]PTK{I|L};[K{I|L}]G[PA]PTK{I|L};[{I|L}A][PG]KPKT{I|L} 4.0308;3.2065;3.1154;3.0654;2.4207;2.3992;2.3328;2.3296;2.2796;1.9325 -;-;-;+;-;-;-;-;-;- + 253 + 1 2.054 80037.0 0.4300000071525574 710 4715 5425 SUDHL4_400M_050219_2,5427 SUDHL4_400M_050219_2,5427,KLGPAPKTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5429 25.312 80.0 591440.0 25 0 136700.0 + 14744 ILDAGGHNV 9 73 448.23523354877193 894.4559141643439 2 448.2350036501884 MULTI CID FTMS 0 0 0 5428 596561.0 0.4453676884626288 4 -0.1172924041748046 1 Unmodified _ILDAGGHNV_ ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1 29.081581746732265 0.1611639662936252 6 {I|L}{I|L}DAGGH{[NV]|[RG]} 9 0 + 41.322 0.0 0.0 4.6198 4.6198 73.47 0.0 0.0 0.0 26.88547520912806 0.6424927368725974 0.6424927368725974 0.4575749056067479 0 0.75 2.0 0.0 0.0 + + {I|L}{I|L}DAGGH{[NV]|[RG]};{I|L}{I|L}DANH{[NV]|[RG]};{I|L}{I|L}DQGH{[NV]|[RG]} 4.6198;4.5687;4.5687 +;-;- + 117 + 1 2.054 43358.9 1.0 711 4716 5428 SUDHL4_400M_050219_2,5429 SUDHL4_400M_050219_2,5429,ILDAGGHNV False True ILDAGGHNV 25.311962 448.235003650188 10937388.0 5428.0 ENSG00000173692|ENST00000308696|PSMD1;;nc|ENSG00000173692|Q99460-2|PSMD1 5.306419213612874 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5430 25.32 454.0 240510.0 25 0 29352.0 + 36669 TAYPGQTQY 9 123 514.7378222158789 1027.4610914985576 2 514.7379028201103 MULTI CID FTMS 0 0 0 5428 193946.984375 0.2843114525002746 -3 0.09149169921875 2 Unmodified _TAYPGQTQY_ ENSG00000158161|ENST00000373871|EYA3;ENST00000471498.5_1_1:28324859-28384546:-|nuORF;nc|ENSG00000158161|Q99504-3|EYA3;nc|ENSG00000158161|Q99504-4|EYA3;nc|ENSG00000158161|Q99504-5|EYA3 45.69961567697781 0.0497987121815769 6 [TA]G[PG]QY 7 3 41.771 0.0 0.0 4.0655 0.0 0.0 0.0 350.1390869908775 350.1390869908775 27.16704871842107 0.0 0.0 0.0 0 0.5 1.5228787452803376 1.6819235388994782 0.3252574989159953 [TA]G[PG]QY 4.0655 - 1963 1 2.054 89160.6 1.0 712 4716 5428 SUDHL4_400M_050219_2,5430 SUDHL4_400M_050219_2,5430,TAYPGQTQY True True TAYPGQTQY 25.320364 514.73790282011 3171908.0 5428.0 ENSG00000158161|ENST00000373871|EYA3;;nc|ENSG00000158161|Q99504-5|EYA3;;ENST00000471498.5_1_1:28324859-28384546:-|nuORF;;nc|ENSG00000158161|Q99504-3|EYA3;;nc|ENSG00000158161|Q99504-4|EYA3 7.260481198628743 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5431 25.334 800.0 120930.0 25 0 5526.9 -1 RPCPWNYGQF 10 102 662.7993552193267 1323.5841575054533 2 662.7990600466728 MULTI CID FTMS 0 0 0 5428 109992.328125 1.0 0 0.0 3 Carbamidomethyl (C) _RPC(Carbamidomethyl (C))PWNYGQF_ ENSG00000104055|ENST00000220420|TGM5;nc|ENSG00000104055|O43548-2|TGM5 32.30548876998284 0.2428506522065767 6 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F} 13 -1 + 122.71 0.0 0.0 9.2713 9.2713 92.46 0.0 0.0 0.0 13.305944602890731 16.642078980768062 13.305944602890731 8.37279628298296 0 1.1549471895720984 1.2218487496163564 0.2742275032520141 2.124803706770636 {[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}Q{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}GEA[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}GEAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}GEAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}GEAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}AG{M(Oxidation (M))|F}GEA[AG]QNA{M(Oxidation (M))|F} 9.2713;8.6387;8.5884;8.5859;8.5859;8.5859;8.266;7.9533;7.9533;7.9533 -;-;-;-;-;-;-;-;-;- 4496 1 2.054 73295.7 0.4900000095367431 713 4716 5428 SUDHL4_400M_050219_2,5431 SUDHL4_400M_050219_2,5431,RPCPWNYGQF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5432 25.346 673.0 125290.0 25 0 13951.0 + 17126 KLGPDDPNV 9 107 477.7477405403206 953.4809281474412 2 477.7477294802666 MULTI CID FTMS 0 0 0 5428 103470.8046875 1.0 0 0.0 4 Unmodified _KLGPDDPNV_ ENSG00000126214|ENST00000334553|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866-4|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866|KLC1 32.78568957990786 0.1150597335874693 6 [DP]VAKDPNV 9 5 [DP]VAKD + + 21.752 1.609 0.25732 2.2813 2.2813 50.596 0.0 0.0 0.0 0.0 15.726372801696868 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3252574989159953 [DP]VAKDPNV 2.2813 - 113 + 1 2.054 68042.0 1.0 714 4716 5428 SUDHL4_400M_050219_2,5432 SUDHL4_400M_050219_2,5432,KLGPDDPNV True True KLGPDDPNV 25.345906 477.747729480267 456213.21875 5428.0 nc|ENSG00000126214|Q07866-10|KLC1;;nc|ENSG00000126214|Q07866-2|KLC1;;nc|ENSG00000126214|Q07866-6|KLC1;;nc|ENSG00000126214|Q07866-5|KLC1;;nc|ENSG00000126214|Q07866-8|KLC1;;ENSG00000126214|ENST00000334553|KLC1;;nc|ENSG00000126214|Q07866-3|KLC1;;nc|ENSG00000126214|Q07866-7|KLC1;;nc|ENSG00000126214|Q07866|KLC1;;nc|ENSG00000126214|Q07866-4|KLC1 5.263948122660319 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5434 25.353 145.0 375820.0 25 0 53403.0 -1 RMLPHAPGV 9 73 497.2684189638632 992.5222849945264 2 497.2689391970634 MULTI CID FTMS 0 0 0 5433 308718.5625 0.8786310814488573 3 -0.0785541534423828 1 Oxidation (M) _RM(Oxidation (M))LPHAPGV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 11.640296217721598 0.521594087909532 6 KA[RP] 4 -1 22.703 0.0 0.0 2.2874 0.0 0.0 522.22758681465 0.0 522.22758681465 0.0 10.228787452803374 0.0 0.0 0 1.0 0.0 0.0 0.0 KA[RP] 2.2874 - 45 1 2.054 47623.0 1.0 715 4717 5433 SUDHL4_400M_050219_2,5434 SUDHL4_400M_050219_2,5434,RMLPHAPGV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5435 25.359 331.0 225280.0 25 0 22739.0 18579 LACRGAAA 8 109 366.69338549830553 731.3722180634111 2 366.6923705935478 MULTI CID FTMS 0 0 0 5433 126138.203125 0.3492469350862379 5 -0.1117267608642578 2 Unmodified _LACRGAAA_ ENSG00000123453|ENST00000439388|SARDH;nc|ENSG00000123453|Q9UL12-2|SARDH 2.889219685676258 0.8067950007271085 6 S{I|L}G{I|L}{I|L}DD 7 8 + 58.974 0.0 0.0 8.0635 8.0635 98.061 0.0 0.0 0.0 46.34241515446461 10.033867992887116 10.033867992887116 58.9740306082912 0 0.2742275032520141 2.0 0.3536348176228748 0.0 S{I|L}G{I|L}{I|L}DD 8.0635 - 63 + 1 2.054 63641.7 1.0 716 4717 5433 SUDHL4_400M_050219_2,5435 SUDHL4_400M_050219_2,5435,LACRGAAA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5436 25.367 497.0 241680.0 25 0 32947.0 + 45332 YSLGPVGW 8 89 439.7221835776089 877.4298142220179 2 439.7218505740166 MULTI CID FTMS 0 0 0 5433 199491.65625 0.2940296495981703 -8 0.198312759399414 3 Unmodified _YSLGPVGW_ REV__ENST00000586077.1_1_19:34890117-34890414:+|nuORF 28.17323086031832 0.4514957916281387 6 YSA{I|L}D 5 -1 52.083 0.0 0.0 5.9359 0.0 0.0 0.0 325.16235066563064 325.16235066563064 31.62585341864037 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.2614393726401688 0.0 YSA{I|L}D 5.9359 - 90 + 1 2.054 97983.5 1.0 717 4717 5433 SUDHL4_400M_050219_2,5436 SUDHL4_400M_050219_2,5436,YSLGPVGW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5437 25.373 327.0 284300.0 25 0 61143.0 + + 24025 IVDRTTTVV 9 91 502.29293093939856 1002.5713089455973 2 502.2918884158134 MULTI CID FTMS 0 0 0 5433 196622.578125 0.6825304335629471 -1 0.0387382507324218 4 Unmodified _LVYNPSLVV_ ENSG00000115902|ENST00000234256|SLC1A4;nc|ENSG00000115902|P43007-2|SLC1A4 39.94969957227396 0.0757326808254658 6 [{I|L}V]{[C(Carbamidomethyl (C))E]|[WC]}[TA]{I|L}VV 9 -1 + 54.12 0.0 0.0 5.3981 5.3981 91.291 0.0 0.0 0.0 18.3746870720632 18.46787486224656 18.3746870720632 54.12008419542517 0 1.1549471895720984 2.0 1.1989700043360187 0.0 [{I|L}V]{[C(Carbamidomethyl (C))E]|[WC]}[TA]{I|L}VV 5.3981 - 207 1 2.054 75922.6 1.0 718 4717 5433 SUDHL4_400M_050219_2,5437 SUDHL4_400M_050219_2,5437,LVYNPSLVV False False IVDRTTTVV 25.373389 502.291888415813 1101992.125 5433.0 ENSG00000115902|ENST00000234256|SLC1A4;;nc|ENSG00000115902|P43007-2|SLC1A4 4.213699658711751 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5438 25.378 261.0 188940.0 25 0 12907.0 + 38347 TQMPDPKTF 9 92 540.7554747585469 1079.4963965838938 2 540.7552368044853 MULTI CID FTMS 0 0 0 5433 182346.578125 0.9388501090722569 1 -0.0448646545410156 5 Oxidation (M) _TQM(Oxidation (M))PDPKTF_ ENSG00000120963|ENST00000311212|ZNF706 49.55428908609986 0.0413471690215031 6 [KP]T{M(Oxidation (M))|F}{[ET]|[MV]}{M(Oxidation (M))|F}[NP] 9 8 + 25.212 0.0 0.0 2.3355 2.3355 50.669 0.0 0.0 0.0 0.7640941797061593 8.288493772929048 0.7640941797061593 0.0 0 0.8494850021680094 0.0 0.2614393726401688 0.0 [KP]T{M(Oxidation (M))|F}{[ET]|[MV]}{M(Oxidation (M))|F}[NP];[KP]T[DV]Y{M(Oxidation (M))|F}[NP];[QT][YT]NYYK;[NP][NP]ANP[DN]K;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[{I|L}V]{[ET]|[MV]}{M(Oxidation (M))|F}[NP];[QT][YT][{I|L}P]{M(Oxidation (M))|F}[NP];[QT][YT]N{[QD]|[EN]|[WG]|[KD]|[RS]}[NP];[NP][NP]AN{[QD]|[EN]|[WG]|[KD]|[RS]}[NP];[QT]{M(Oxidation (M))|F}{[ET]|[MV]}[KP]{[ET]|[MV]};[{M(Oxidation (M))|F}T]{[CA]|SS}ANYYK 2.3355;2.3355;1.5847;1.2905;0.81292;0.65696;0.54236;0.50467;0.41906;0.27963 -;-;-;-;-;-;-;-;-;- 200 1 2.054 45806.9 1.0 719 4717 5433 SUDHL4_400M_050219_2,5438 SUDHL4_400M_050219_2,5438,TQMPDPKTF True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5439 25.391 724.0 163860.0 25 0 9251.8 + 33809 SLDPLQFT 8 145 460.7414530615935 919.468353189987 2 460.7416259646416 MULTI CID FTMS 0 0 0 5433 126655.5703125 0.7145480327212922 -9 0.2023792266845703 6 Unmodified _SLDPLQFT_ REV__ENSG00000169918|ENST00000307050|OTUD7A;REV__nc|ENSG00000169918|Q8TE49|OTUD7A 19.256988751693697 0.6264283240490721 6 [DV]TP{I|L}T{M(Oxidation (M))|F}K 8 -1 + 30.081 0.0 0.0 3.2715 3.2715 73.826 0.0 0.0 0.0 5.484550065040281 3.210439986852414 3.210439986852414 3.210439986852414 0 0.6462566630072955 0.0 0.3807196863200844 0.0 [DV]TP{I|L}T{M(Oxidation (M))|F}K;[DV]TP{I|L}T{M(Oxidation (M))|F}Q;{[TV]|[{I|L}S]}[Q{I|L}]VT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}P]T[KT]T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[DV]TK{[QN]|[E{I|L}]|[KN]}{[ES]|[DT]|[{I|L}C]};[TP]{I|L}[KT]T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}[KA]VT{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[DV][YV]{I|L}N[TP];{[YD]|[{M(Oxidation (M))|F}M]}T[KT]PVP;{[YD]|[{M(Oxidation (M))|F}M]}T[{I|L}P][KS]P 3.2715;2.9224;2.0163;0.8961;0.85858;0.37175;0.294;0.19067;0.17912;0.14653 -;-;-;-;-;-;-;-;-;- 431 + 1 2.054 96044.0 1.0 720 4717 5433 SUDHL4_400M_050219_2,5439 SUDHL4_400M_050219_2,5439,SLDPLQFT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5441 25.396 156.0 301650.0 25 0 49784.0 + 31584 RQPPSTTTF 9 72 517.7675974819439 1033.5206420306877 2 517.7666503787041 MULTI CID FTMS 0 0 0 5440 191076.3125 0.5559562624800385 -7 0.2234687805175781 1 Unmodified _RQPPSTTTF_ nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1 39.94969957227396 0.0757326808254658 6 TTT{M(Oxidation (M))|F} 4 5 38.66 0.0 0.0 3.7406 0.0 0.0 565.2987538221581 0.0 565.2987538221581 0.0 12.673880787217088 0.0 0.0 0 0.5 0.0 1.424742501084005 0.0 + TTT{M(Oxidation (M))|F} 3.7406 + + 169 1 2.054 46082.1 1.0 721 4718 5440 SUDHL4_400M_050219_2,5441 SUDHL4_400M_050219_2,5441,RQPPSTTTF True True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 5442 25.403 339.0 143090.0 25 0 22036.0 -1 0 76 512.2373605140843 511.2300840474844 1 512.2360107302666 MULTI CID FTMS 0 0 0 5440 225812.328125 0.4969513052684237 -9 0.2431774139404297 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 2.054 42272.4 1.0 722 4718 5440 SUDHL4_400M_050219_2,5442 SUDHL4_400M_050219_2,5442, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5443 25.407 212.0 235480.0 25 0 34576.0 + 43678 YATVSQSL 8 81 434.72383247900336 867.4331120248067 2 434.7241393923759 MULTI CID FTMS 0 0 0 5440 137468.140625 0.7097680997113237 -2 0.0836029052734375 3 Unmodified _YATVSQSL_ REV__ENSG00000158715|ENST00000367145|SLC45A3;REV__ENST00000460934.1_1_1:205628364-205631520:-|nuORF 16.942295170755138 0.6606234159769251 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[TV]|[{I|L}S]}[KA]DT 8 -1 + 20.876 0.0 0.0 2.4066 2.4066 81.426 0.0 0.0 0.0 4.604546065625428 6.271818570135324 4.604546065625428 18.182955476022894 0 0.7742275032520141 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[TV]|[{I|L}S]}[KA]DT;[KG][{M(Oxidation (M))|F}T]{[TV]|[{I|L}S]}DT 2.4066;0.31045 -;- 31 1 2.054 44259.4 1.0 723 4718 5440 SUDHL4_400M_050219_2,5443 SUDHL4_400M_050219_2,5443,YATVSQSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5444 25.42 800.0 85787.0 25 0 9185.0 6409 DYSGYQRDGYQ 11 80 676.2809019697343 1350.5472510062684 2 676.2806884646416 MULTI CID FTMS 0 0 0 5440 83467.0078125 0.5641648464524992 -8 0.2275352478027343 4 Unmodified _DYSGYQRDGYQ_ ENSG00000135387|ENST00000341394|CAPRIN1;ENST00000531668.1_1_11:34117397-34120911:+|nuORF;nc|ENSG00000135387|Q14444-2|CAPRIN1 20.41453444215458 0.6105011870913812 6 [HD]EAQQDA{M(Oxidation (M))|F}YQ 11 7 + 93.748 0.0 0.0 6.9415 6.9415 89.78 0.0 0.0 0.0 4.981979378655879 83.91496412826197 4.981979378655879 9.128498242811006 0 1.0 0.0 1.2302046884880935 0.8494850021680094 [HD]EAQQDA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]DA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QDA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QDA{M(Oxidation (M))|F}YQ;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQDA{M(Oxidation (M))|F}YQ;[HD]EA[AG][AG]DA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K][AG]DA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QW{M(Oxidation (M))|F}YQ;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q[AG]DA{M(Oxidation (M))|F}YQ;{[SA]|[TG]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[AG]QDA{M(Oxidation (M))|F}YQ 6.9415;6.2656;6.2656;5.2722;5.0904;4.9629;4.5936;4.5066;4.4145;4.4145 -;-;-;-;-;-;-;-;-;- 760 1 2.054 53065.8 0.4300000071525574 724 4718 5440 SUDHL4_400M_050219_2,5444 SUDHL4_400M_050219_2,5444,DYSGYQRDGYQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5447 25.44 735.0 201400.0 25 0 29548.0 + 8880 FAEGQGRAL 9 138 474.7485084508058 0 474.7489501833916 PEAK CID FTMS 0 0 0 5446 87166.125 0.319009642743959 -10 0.2612247467041015 1 Unmodified _FAEGQGRAL_ ENSG00000103335|ENST00000301015|PIEZO1 36.12702656103203 0.0807574182900477 6 AEGQ[KP]A 7 4 36.969 0.0 0.0 3.9018 0.0 0.0 147.0685631004182 116.05098901920157 263.1195521196197 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.3252574989159953 AEGQ[KP]A 3.9018 - 137 + 1 2.054 116387.4 1.0 725 4720 5446 SUDHL4_400M_050219_2,5447 SUDHL4_400M_050219_2,5447,FAEGQGRAL True True FAEGQGRAL 25.439735 474.748950183392 2498640.75 5446.0 ENSG00000103335|ENST00000301015|PIEZO1 3.957267920176188 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5448 25.454 800.0 112940.0 25 0 11485.0 -1 VLFVEDGKME 10 96 591.789793316112 1181.5650336990238 2 591.7900878787041 MULTI CID FTMS 0 0 0 5446 94230.96875 0.2531963255606962 -26 0.4474639892578125 2 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 31.26834338654808 0.266153677697784 6 G{I|L}KG{[MS]|[{M(Oxidation (M))|F}A]}SV 8 -1 44.646 0.0 0.0 3.7786 0.0 0.0 404.1656666486344 0.0 404.1656666486344 0.0 30.113525574522484 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.3494850021680094 G{I|L}KG{[MS]|[{M(Oxidation (M))|F}A]}SV 3.7786 - 144 1 2.054 70999.1 0.4799999892711639 726 4720 5446 SUDHL4_400M_050219_2,5448 SUDHL4_400M_050219_2,5448,VLFVEDGKME False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5451 25.474 800.0 92091.0 25 0 19787.0 + 19713 LGMRPFSQ 8 94 468.2425472861191 0 468.2422668337822 PEAK CID FTMS 0 0 0 5450 60408.55859375 0.5972537034764136 1 -0.0163822174072265 1 Unmodified _LGMRPFSQ_ REV__ENST00000497825.5_1_9:130213401-130213527:-|nuORF 10.183394434864962 0.5394990767616434 6 {I|L} 1 -1 3.9794 0.0 0.0 0.42585 0.0 0.0 675.3170209864976 143.04633508853752 818.3633560750351 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.42585 + + 2 + 1 2.054 63926.1 0.4600000083446502 727 4722 5450 SUDHL4_400M_050219_2,5451 SUDHL4_400M_050219_2,5451,LGMRPFSQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5454 25.483 79.0 771490.0 25 0 113830.0 35682 SVELSGYFK 9 83 515.2679599979142 1028.5213670626283 2 515.2679931521416 MULTI CID FTMS 0 0 0 5453 573975.125 0.8435189786217824 -3 0.0243244171142578 1 Unmodified _SVELSGYFK_ ENST00000478553.1_1_20:4761798-4761861:-|nuORF 14.838274106304384 0.4350285940865338 6 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K 9 6 + 65.473 0.0 0.0 6.3657 6.3657 93.243 0.0 0.0 0.0 49.95333646624393 10.379304062195928 10.379304062195928 24.247425010840047 0 0.4247425010840047 2.0 0.0 0.1382104921644452 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}Y[PG]TT{I|L}K 6.3657;4.0082;2.4778 -;-;- 75 + 1 2.054 51323.3 1.0 728 4724 5453 SUDHL4_400M_050219_2,5454 SUDHL4_400M_050219_2,5454,SVELSGYFK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5457 25.492 142.0 396860.0 25 0 59201.0 37018 TFQQICSF 8 74 487.2271910885371 972.4398292438742 2 487.2274658083916 MULTI CID FTMS 0 0 0 5456 327109.875 0.8911073960055634 -5 0.0332050323486328 1 Unmodified _TFQQICSF_ ENSG00000182578|ENST00000675795|CSF1R;ENST00000509861.1_1_5:149433634-149434058:-|nuORF 8.593279151180031 0.7721714526254883 6 {I|L}{I|L}PP 4 7 40.445 0.0 0.0 4.1592 0.0 0.0 0.0 549.1465402148341 549.1465402148341 27.68110275043508 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}PP 4.1592 - 25 + 1 2.054 51060.9 1.0 729 4726 5456 SUDHL4_400M_050219_2,5457 SUDHL4_400M_050219_2,5457,TFQQICSF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5458 25.506 800.0 61705.0 25 0 5195.0 + 17784 KQIKPDMETY 10 87 634.8127254923794 1267.6108980515587 2 634.8134033083916 MULTI CID FTMS 0 0 0 5456 90931.609375 0.6293658868512839 -3 0.0127716064453125 2 Oxidation (M) _KQIKPDM(Oxidation (M))ETY_ ENSG00000117614|ENST00000236273|SYF2;nc|ENSG00000117614|O95926-2|SYF2 49.55428908609986 0.0827668555218455 6 [KQ]{I|L}K[DC][RN]TY 10 3 [KQ] + + 32.827 7.8432 3.0619 2.5897 2.5897 51.042 0.0 0.0 0.0 0.0 20.062689843980856 0.0 0.0 0 1.274227503252014 0.0 0.6139829889124311 0.0 [KQ]{I|L}K[DC][RN]TY 2.5897 - 207 + 1 2.054 44819.7 0.449999988079071 730 4726 5456 SUDHL4_400M_050219_2,5458 SUDHL4_400M_050219_2,5458,KQIKPDMETY True False KQIKPDMETY 25.506024 634.813403308392 491370.78125 5456.0 ENSG00000117614|ENST00000236273|SYF2;;nc|ENSG00000117614|O95926-2|SYF2 8.844208399454752 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5462 25.526 523.0 131630.0 25 0 11033.0 + 38554 TSTYSINT 8 105 443.71087310768223 885.4071932821645 2 443.7112914919853 MULTI CID FTMS 0 0 0 5461 78846.9296875 0.6939989118711937 3 -0.0619678497314453 1 Unmodified _TSTYSINT_ REV__ENSG00000205038|ENST00000378402|PKHD1L1 23.1484247019978 0.5573009939494978 6 [EP]P{I|L}N[WM] 7 -1 + 24.9 0.0 0.0 2.8123 2.8123 76.5 0.0 0.0 0.0 8.178732196748587 -3.698339878747493 -3.698339878747493 7.270760251333069 0 0.0 0.9208187539523752 0.1747425010840047 0.0 [EP]P{I|L}N[WM];[EP]P{I|L}{[ES]|[DT]|[{I|L}C]}{[QS]|[NT]};[EP]{I|L}PN[WM];[EP]{I|L}NP[WM];[EP]P{I|L}GG[WM];{[HG]|PP}E{I|L}N[WM];[EP]{I|L}P{[ES]|[DT]|[{I|L}C]}{[QS]|[NT]};[EP]{I|L}PGG[WM];[EP]{I|L}GGP[WM];{[HG]|PP}E{I|L}{[ES]|[DT]|[{I|L}C]}{[QS]|[NT]} 2.8123;1.9911;1.8578;1.8001;1.7585;1.3005;1.0367;0.80402;0.74625;0.47929 -;-;-;-;-;-;-;-;-;- 120 1 2.054 61291.4 1.0 731 4729 5461 SUDHL4_400M_050219_2,5462 SUDHL4_400M_050219_2,5462,TSTYSINT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5463 25.54 800.0 132120.0 25 0 7074.7 + 32158 RVQPKVTVY 9 138 545.3247682956013 1088.6349836580025 2 545.3242675662041 MULTI CID FTMS 0 0 0 5461 104869.46875 0.692304605749794 -3 0.0271892547607421 2 Unmodified _RVQPKVTVY_ ENSG00000196126|ENST00000360004|HLA-DRB1 43.85829265575387 0.0542763391141878 6 [RV]Q[KP]VTVY 9 0 + 59.741 0.0 0.0 5.4877 5.4877 86.654 0.0 0.0 0.0 11.78271899205285 30.30413597472293 11.78271899205285 9.208187539523747 0 0.8807196863200843 0.8860566476931632 0.7742275032520141 0.566901560044258 + + [RV]Q[KP]VTVY;[RV][AG][KP]VTVY;[QA]VRQ{I|L}{I|L}VY;[QA]VR[AG]{I|L}{I|L}VY;[QA]Q[RV]{I|L}{I|L}VY 5.4877;4.6419;1.87;1.0241;0.78964 +;-;-;-;- + 229 1 2.054 85441.5 0.5099999904632568 732 4729 5461 SUDHL4_400M_050219_2,5463 SUDHL4_400M_050219_2,5463,RVQPKVTVY True True RVQPKVTVY 25.539555 545.324267566204 750810.5625 5461.0 ENSG00000196126|ENST00000360004|HLA-DRB1 7.057214101155599 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5464 25.552 729.0 123580.0 25 0 11492.0 + 35813 SVKRESTP 8 97 452.248273041819 902.481993150438 2 452.2486450076103 MULTI CID FTMS 0 0 0 5461 94104.140625 0.5670392436897016 11 -0.1956863403320312 3 Unmodified _SVKRESTP_ REV__ENSG00000080986|ENST00000261597|NDC80 11.640296217721598 0.738950129755968 6 [VS]A 3 -1 23.543 0.0 0.0 2.6087 0.0 0.0 0.0 642.3223360650999 642.3223360650999 11.553331073971762 0.0 0.0 0.0 0 0.3252574989159953 1.5228787452803376 0.0 0.0 [VS]A 2.6087 - 80 + 1 2.054 73769.8 1.0 733 4729 5461 SUDHL4_400M_050219_2,5464 SUDHL4_400M_050219_2,5464,SVKRESTP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5467 25.573 794.0 108190.0 25 0 12650.0 + 42396 VTDSTQVNV 9 123 481.7422948383851 961.4700367435702 2 481.7429382205009 MULTI CID FTMS 0 0 0 5466 128175.875 1.0 0 0.0 1 Unmodified _VTDSTQVNV_ ENSG00000274523|ENST00000610322|RCC1L;ENST00000420642.1_7:74765936-74789271:+|nuORF;nc|ENSG00000274523|Q96I51-2|RCC1L;nc|ENSG00000274523|Q96I51-3|RCC1L 54.773552608820026 0.0299037012502309 6 {[TV]|[{I|L}S]}DSQT 6 4 36.171 0.0 0.0 3.762 0.0 0.0 0.0 327.16663084885766 327.16663084885766 16.35029351276792 0.0 0.0 0.0 0 0.25 1.5228787452803376 1.0994850021680094 0.0 {[TV]|[{I|L}S]}DSQT 3.762 - 629 1 2.054 72842.9 1.0 734 4731 5466 SUDHL4_400M_050219_2,5467 SUDHL4_400M_050219_2,5467,VTDSTQVNV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5468 25.576 175.0 277560.0 25 0 18484.0 -1 ECKECRKCFYQ 11 74 775.8289297661361 1549.643306599072 2 775.8287231326103 MULTI CID FTMS 0 0 0 5466 198127.5 0.8880505274764479 -3 0.0461807250976562 2 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 19.361941925380144 0.6323962752489956 6 EWQHW{M(Oxidation (M))|F}YQ 8 -1 47.12 0.0 0.0 3.0407 0.0 0.0 327.15326861254704 0.0 327.15326861254704 0.0 3.4994821719013203 0.0 0.0 0 0.5 0.0 0.0 0.6861818737241735 EWQHW{M(Oxidation (M))|F}YQ 3.0407 - 4024 + 1 2.054 40688.8 1.0 735 4731 5466 SUDHL4_400M_050219_2,5468 SUDHL4_400M_050219_2,5468,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5471 25.596 800.0 115680.0 25 0 39842.0 + -1 SALRRSGYGPSD 12 63 654.3203423903215 1306.6261318474428 2 654.3201171755791 MULTI CID FTMS 0 0 0 5470 66981.21875 0.6310511058451526 -1 0.0040607452392578 1 Oxidation (M) _DTTLRRSQM(Oxidation (M))SP_ ENSG00000156735|ENST00000287322|BAG4;nc|ENSG00000156735|O95429-2|BAG4 8.155526934196011 0.8366696279279818 6 GD[PS] 4 -1 16.995 0.0 0.0 1.3007 0.0 0.0 932.4823768199022 0.0 932.4823768199022 0.0 0.796896906561031 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 GD[PS] 1.3007 - 37 + 1 2.054 73817.8 0.4799999892711639 736 4733 5470 SUDHL4_400M_050219_2,5471 SUDHL4_400M_050219_2,5471,DTTLRRSQMSP False False SALRRSGYGPSD 25.596394 654.320117175579 608812.375 5470.0 ENSG00000156735|ENST00000287322|BAG4;;nc|ENSG00000156735|O95429-2|BAG4 6.422764937082927 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5474 25.608 242.0 274660.0 25 0 52734.0 13744 HRLPSLLLPP 10 74 381.5739774609832 1141.7001029831497 3 381.5739318728447 MULTI CID FTMS 0 0 0 5473 122621.1484375 0.0135013675690873 -14 0.146860122680664 1 Unmodified _HRLPSLLLPP_ ENSG00000078070|ENST00000265594|MCCC1 3.319642798002388 0.7112812012931492 6 K{I|L}K[QP]E 6 8 23.901 0.0 0.0 2.0935 0.0 0.0 400.2805348126969 0.0 400.2805348126969 0.0 13.063469707618962 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.0935 - 38 1 2.054 58002.2 1.0 737 4735 5473 SUDHL4_400M_050219_2,5474 SUDHL4_400M_050219_2,5474,HRLPSLLLPP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5475 25.621 800.0 119920.0 25 0 21007.0 29187 QGDQMCRGN 9 119 504.70074995162304 1007.386946970046 2 504.7008849978447 MULTI CID FTMS 0 0 0 5473 110242.7421875 1.0 0 0.0 2 Unmodified _QGDQMCRGN_ ENST00000435880.6_1_2:70190354-70215932:-|nuORF 19.256988751693697 0.3154191944385105 6 [AG]GD 4 7 19.921 0.0 0.0 1.9775 0.0 0.0 0.0 704.2563677066273 704.2563677066273 4.430951486635273 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.3807196863200844 0.0 [AG]GD 1.9775 - 268 1 2.054 75581.8 0.5099999904632568 738 4735 5473 SUDHL4_400M_050219_2,5475 SUDHL4_400M_050219_2,5475,QGDQMCRGN False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5477 25.629 301.0 177160.0 25 0 23400.0 + + 45333 YSAPGRDL 8 70 439.7221835776089 877.4298142220179 2 439.7219421267509 MULTI CID FTMS 0 0 0 5476 169363.90625 0.24962452538295 11 -0.203277587890625 1 Unmodified _YSLGPVGW_ ENSG00000008018|ENST00000262193|PSMB1 20.871210003555333 0.6025813472596342 6 YSAP 4 -1 49.24 0.0 0.0 5.6119 0.0 0.0 0.0 456.2219637506469 456.2219637506469 29.196599091017564 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 YSAP 5.6119 - 37 + 1 2.054 46222.9 1.0 739 4736 5476 SUDHL4_400M_050219_2,5477 SUDHL4_400M_050219_2,5477,YSLGPVGW False False YSAPGRDL 25.629373 439.721942126751 6332191.5 5476.0 ENSG00000008018|ENST00000262193|PSMB1 5.594582239786784 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5479 25.641 520.0 143100.0 25 0 10202.0 22900 LSDFTQLP 8 111 460.7414530615935 919.468353189987 2 460.7420226931572 MULTI CID FTMS 0 0 0 5478 149229.625 0.8419032396632175 11 -0.1993083953857422 1 Unmodified _LSDFTQLP_ ENST00000491148.5_1_3:148509015-148545505:+|nuORF 19.438996006549623 0.6237395211498085 6 [TA]PP 4 6 13.265 0.0 0.0 1.4426 0.0 0.0 0.0 550.255681641412 550.255681641412 -0.5079609222079764 0.0 -0.5079609222079764 0.0 0 0.0 1.3979400086720375 0.1462566630072955 0.0 [TA]PP 1.4426 - 139 1 2.054 65193.6 1.0 740 4737 5478 SUDHL4_400M_050219_2,5479 SUDHL4_400M_050219_2,5479,LSDFTQLP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5480 25.655 800.0 105410.0 25 0 9610.8 1272 AINGDHTESE 10 114 536.7314611452626 1071.4483693573252 2 536.7310668826103 MULTI CID FTMS 0 0 0 5478 93204.546875 1.0 0 0.0 2 Unmodified _AINGDHTESE_ ENSG00000107521|ENST00000361490|HPS1;ENST00000467246.5_1_10:100191016-100205113:-|nuORF;ENST00000474873.5_1_10:100195027-100205113:-|nuORF;nc|ENSG00000289758|Q92902-2|HPS1;nc|ENSG00000289758|Q92902-3|HPS1;nc|ENSG00000289758|Q92902-4|HPS1 19.256988751693697 0.5244284437930726 6 [{I|L}A]{[{M(Oxidation (M))|F}C]|[YS]}C(Carbamidomethyl (C))P 6 8 16.928 0.0 0.0 1.5799 0.0 0.0 0.0 377.1308759979217 377.1308759979217 4.163909719542684 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}A]{[{M(Oxidation (M))|F}C]|[YS]}C(Carbamidomethyl (C))P 1.5799 - 209 1 2.054 68458.0 0.4699999988079071 741 4737 5478 SUDHL4_400M_050219_2,5480 SUDHL4_400M_050219_2,5480,AINGDHTESE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5482 25.661 200.0 302730.0 25 0 40224.0 + 31585 RQPPSTTTF 9 94 517.7675974819439 1033.5206420306877 2 517.7671386599541 MULTI CID FTMS 0 0 0 5481 229991.21875 0.6691832007145259 13 -0.1982994079589843 1 Unmodified _RQPPSTTTF_ nc|ENSG00000139697|A3KN83-2|SBNO1;nc|ENSG00000139697|A3KN83-4|SBNO1 47.74868867922204 0.0453060283459952 6 TTT{M(Oxidation (M))|F} 4 5 42.384 0.0 0.0 4.1009 0.0 0.0 565.2965565412125 0.0 565.2965565412125 0.0 16.308670327676626 0.0 0.0 0 1.0 0.0 1.424742501084005 0.0 + TTT{M(Oxidation (M))|F} 4.1009 + + 394 1 2.054 53230.2 1.0 742 4738 5481 SUDHL4_400M_050219_2,5482 SUDHL4_400M_050219_2,5482,RQPPSTTTF True True RQPPSTTTF 25.661266 517.767138659954 7172685.0 5481.0 nc|ENSG00000139697|A3KN83-4|SBNO1;;nc|ENSG00000139697|A3KN83-2|SBNO1 8.524779001871744 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 5483 25.668 401.0 210390.0 25 0 25619.0 + 5987 DRGAGEGFIQ 10 82 525.2539808962176 1048.4934088592352 2 525.2538329958916 MULTI CID FTMS 0 0 0 5481 146992.046875 0.3997353224867533 -6 0.0789413452148437 2 Unmodified _DRGAGEGFIQ_ REV__ENST00000598018.1_1_19:49936751-49940072:-|nuORF 26.020703789607367 0.3840598856887971 6 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q 8 -1 + 44.13 0.0 0.0 4.2089 4.2089 76.144 0.0 0.0 0.0 34.6657624451305 0.5225622685225773 0.5225622685225773 3.0102999566398125 0 0.9247425010840048 0.0 0.0 0.4247425010840047 {[CA]|SS}W{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}W[C(Carbamidomethyl (C))R]{I|L}Q;{[DA]|[EG]}{[NV]|[RG]}ADG{M(Oxidation (M))|F}{I|L}Q;{[DA]|[EG]}{[NV]|[RG]}WG{M(Oxidation (M))|F}{I|L}Q;{[CA]|SS}{[DA]|[EG]}{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}[HV]{[YC]|[HE]}{I|L}Q;{[CA]|SS}{I|L}{[DA]|[EG]}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[DN]{I|L}Q;{[DA]|[EG]}{[NV]|[RG]}A[{M(Oxidation (M))|F}V]WQ 4.2089;3.9218;3.5184;3.4696;3.3255;3.0384;3.0384;2.9654;0.27375 -;-;-;-;-;-;-;-;- 205 + 1 2.054 70333.0 1.0 743 4738 5481 SUDHL4_400M_050219_2,5483 SUDHL4_400M_050219_2,5483,DRGAGEGFIQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5484 25.673 216.0 243740.0 25 0 35911.0 + 12009 GPPSHLQS 8 88 411.7089211522572 821.4032893713144 2 411.7087890505791 MULTI CID FTMS 0 0 0 5481 117651.296875 0.813535180665355 -3 0.054443359375 3 Unmodified _GPPSHLQS_ REV__ENSG00000189050|ENST00000305783|RNFT1;REV__ENST00000477207.2_1_17:58039882-58042045:-|nuORF;REV__ENST00000586083.5_1_17:58037427-58042045:-|nuORF;REV__nc|ENSG00000189050|Q5M7Z0-2|RNFT1;REV__nc|ENSG00000189050|Q5M7Z0-3|RNFT1 16.942295170755138 0.6606234159769251 6 {I|L}QS 3 -1 15.7 0.0 0.0 1.9113 0.0 0.0 475.2172273689743 0.0 475.2172273689743 0.0 2.2049999164467966 0.0 0.0 0 0.5242275032520141 0.0 0.0 0.0 {I|L}QS 1.9113 + + 65 1 2.054 47068.2 1.0 744 4738 5481 SUDHL4_400M_050219_2,5484 SUDHL4_400M_050219_2,5484,GPPSHLQS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5485 25.682 532.0 159450.0 25 0 51818.0 -1 0 87 490.2826729494694 489.2753964828694 1 490.2829467654228 MULTI CID FTMS 0 0 0 5481 89762.2578125 0.554665413175579 -18 0.2304248809814453 4 6 VY 2 -1 17.078 0.0 0.0 3.4905 0.0 0.0 209.1335335451725 0.0 209.1335335451725 0.0 5.2956072605932825 0.0 0.0 0 0.0 0.0 0.0 0.0 VY 3.4905 - 20 + 1 2.054 70024.3 1.0 745 4738 5481 SUDHL4_400M_050219_2,5485 SUDHL4_400M_050219_2,5485, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5487 25.695 525.0 164280.0 25 0 27510.0 + 8881 FAEGQGRAL 9 105 474.7485084508058 0 474.7484619021416 PEAK CID FTMS 0 0 0 5486 31804.34765625 0.1163972080154415 9 -0.1468276977539062 1 Unmodified _FAEGQGRAL_ ENSG00000103335|ENST00000301015|PIEZO1 13.90604991867851 0.2674652324371145 6 AEY 3 7 16.555 0.0 0.0 1.7472 0.0 0.0 147.06957441938658 434.2366121881469 581.3061866075335 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 AEY 1.7472 - 28 + 1 2.054 70543.0 1.0 746 4739 5486 SUDHL4_400M_050219_2,5487 SUDHL4_400M_050219_2,5487,FAEGQGRAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5488 25.699 212.0 502330.0 25 0 62932.0 + -1 MPKLGKARLI 10 90 571.8573147157704 1141.7000764983406 2 571.8572265505791 MULTI CID FTMS 0 0 0 5486 249520.0 0.1969372399682281 -5 0.0854625701904296 2 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 24.020572477871973 0.4289996903560794 6 K{I|L}KQPE 6 -1 48.875 0.0 0.0 4.2809 0.0 0.0 400.28013808418126 0.0 400.28013808418126 0.0 35.94335023848103 0.0 0.0 0 0.75 0.0 0.0 0.5 K{I|L}KQPE 4.2809 - 53 1 2.054 87215.4 1.0 747 4739 5486 SUDHL4_400M_050219_2,5488 SUDHL4_400M_050219_2,5488,MPKLGKARLI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5489 25.71 613.0 179540.0 25 0 18230.0 + 26852 PATAVSGTPA 10 108 436.2300778145144 870.4456026958287 2 436.2298461794853 MULTI CID FTMS 0 0 0 5486 156364.3125 0.596481448743137 -4 0.0814037322998046 3 Unmodified _PATAVSGTPA_ ENSG00000006047|ENST00000007699|YBX2 34.10243960390752 0.2198439752719791 6 [TP]AAVD 6 7 36.584 0.0 0.0 4.2029 0.0 0.0 0.0 313.15163231912874 313.15163231912874 21.4581429995878 0.0 0.0 0.0 0 0.2887254899964357 0.638272163982407 1.3324385367314688 0.0 [TP]AAVD 4.2029 - 238 1 2.054 90319.3 1.0 748 4739 5486 SUDHL4_400M_050219_2,5489 SUDHL4_400M_050219_2,5489,PATAVSGTPA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5491 25.718 330.0 296120.0 25 0 43095.0 -1 VLFVEDGKME 10 78 591.789793316112 1181.5650336990238 2 591.7898437380791 MULTI CID FTMS 0 0 0 5490 311847.0625 0.8379254868044301 -6 0.1132793426513671 1 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 28.49450938151212 0.328477364964909 6 [KP][DG][HA]PGK[{M(Oxidation (M))|F}E] 11 -1 [KP][DG][HA]P + + 39.495 -10.546 -1.5015 3.3426 3.3426 52.198 0.0 0.0 0.0 0.0 27.50508444608478 0.0 0.0 0 1.5 0.0 1.1307196863200843 0.0 [KP][DG][HA]PGK[{M(Oxidation (M))|F}E] 3.3426 - 227 + 1 2.054 79199.7 1.0 749 4740 5490 SUDHL4_400M_050219_2,5491 SUDHL4_400M_050219_2,5491,VLFVEDGKME False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5492 25.732 800.0 81099.0 25 0 6116.9 13926 HYGKIDRQDQS 11 84 673.8251684518041 1345.635783970408 2 673.8254882693291 MULTI CID FTMS 0 0 0 5490 87129.0390625 0.6408915726320263 -3 0.0802974700927734 2 Unmodified _HYGKIDRQDQS_ ENSG00000215853|ENST00000316073|RPTN 28.49450938151212 0.4231428536161201 6 SQSP[HQ]KSTN 10 11 78.941 0.0 0.0 5.8665 0.0 0.0 233.10241054759337 0.0 233.10241054759337 0.0 49.18702570072543 0.0 0.0 0 0.2887254899964357 0.0 2.353917193908117 0.6139829889124311 SQSP[HQ]KSTN 5.8665 - 697 + 1 2.054 54311.6 0.4399999976158142 750 4740 5490 SUDHL4_400M_050219_2,5492 SUDHL4_400M_050219_2,5492,HYGKIDRQDQS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5495 25.745 374.0 189840.0 25 0 21790.0 33804 SLDLWCVLE 9 100 359.8480999050862 1076.5224703154586 3 359.8487731814384 MULTI CID FTMS 0 0 0 5494 97503.015625 0.543417734063418 -1 0.004058837890625 1 Unmodified _SLDLWCVLE_ ENST00000377989.8_2_6:25138607-25138802:-|nuORF 10.823927491677226 0.5436922275383211 6 M{I|L} 2 8 13.366 0.0 0.0 1.2416 0.0 0.0 315.1420400370135 514.251707034188 829.3937470712015 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 M{I|L} 1.2416 - 108 + 1 2.054 67412.3 1.0 751 4742 5494 SUDHL4_400M_050219_2,5495 SUDHL4_400M_050219_2,5495,SLDLWCVLE False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5496 25.759 800.0 138970.0 25 0 9189.7 + 2679 ATDPTIHTV 9 129 477.7480843098672 953.4816156865344 2 477.7479125857353 MULTI CID FTMS 0 0 0 5494 112440.2578125 0.3120903101978429 -11 0.1798362731933593 2 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 81.61307344734483 0.0171259190214613 6 [TA]DPT{I|L}HTV 9 0 + 72.006 0.0 0.0 7.5519 7.5519 96.76 0.0 0.0 0.0 54.10138713908098 14.593567365782803 14.593567365782803 39.108057617650175 0 0.7302046884880937 2.0 1.3945990182825423 0.0 + + [TA]DPT{I|L}HTV;[DP]KKTPDGP;[TA][Y{I|L}]TV{[WT]|[RM]};[TA]{[ET]|[MV]}[VP]HTV;[TA]{[ET]|[MV]}T{I|L}RY;[TA][Y{I|L}]S{I|L}{[WT]|[RM]};[TA][Y{I|L}]S[{M(Oxidation (M))|F}V]GP;[TA]{[ET]|[MV]}TV[HV]P;[VS][YV]TV{[WT]|[RM]};[TA][{M(Oxidation (M))|F}V]S[Y{I|L}]GP 7.5519;3.4503;3.2656;3.0513;2.8544;2.4195;1.1879;0.97285;0.68069;0.58757 +;-;-;-;-;-;-;-;-;- + 619 + 1 2.054 85600.3 0.4799999892711639 752 4742 5494 SUDHL4_400M_050219_2,5496 SUDHL4_400M_050219_2,5496,ATDPTIHTV True True ATDPTIHTV 25.75917 477.747912585735 4262997.0 5494.0 nc|ENSG00000086848|Q9H6U8|ALG9;;ENSG00000086848|ENST00000616540|ALG9;;nc|ENSG00000086848|Q9H6U8-2|ALG9;;nc|ENSG00000086848|Q9H6U8-4|ALG9 8.259208043416342 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5498 25.765 109.0 424460.0 25 0 86182.0 + -1 LLPCCPAAE 9 72 487.2271910885371 972.4398292438742 2 487.2273132205009 MULTI CID FTMS 0 0 0 5497 284186.40625 0.7741759812467193 12 -0.1727027893066406 1 Carbamidomethyl (C) _LLPC(Carbamidomethyl (C))CPAAE_ REV__ENSG00000128159|ENST00000248846|TUBGCP6;REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF;REV__nc|ENSG00000128159|Q96RT7-2|TUBGCP6;REV__nc|ENSG00000128159|Q96RT7-3|TUBGCP6 7.910154910731844 0.6385446671287552 6 {I|L}{I|L}PP 4 -1 40.445 0.0 0.0 4.1592 0.0 0.0 0.0 549.1446016900999 549.1446016900999 27.68110275043508 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}PP 4.1592 - 21 + 1 2.054 38532.3 1.0 753 4743 5497 SUDHL4_400M_050219_2,5498 SUDHL4_400M_050219_2,5498,LLPCCPAAE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5499 25.779 800.0 118460.0 25 0 9687.7 + 42176 VSDQHKLMP 9 107 527.7721571394695 1053.529761345739 2 527.7719604372978 MULTI CID FTMS 0 0 0 5497 131250.03125 1.0 0 0.0 2 Unmodified _VSDQHKLMP_ REV__ENSG00000216937|ENST00000639629|CCDC7 10.073929032068715 0.563993802247229 6 {I|L}{NN|[MP]|[D{I|L}]|[EV]} 3 -1 19.749 0.0 0.0 1.8746 0.0 0.0 694.3415116892921 0.0 694.3415116892921 0.0 2.7596217904876887 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.3807196863200844 {I|L}{NN|[MP]|[D{I|L}]|[EV]} 1.8746 + + 171 + 1 2.054 81371.0 0.550000011920929 754 4743 5497 SUDHL4_400M_050219_2,5499 SUDHL4_400M_050219_2,5499,VSDQHKLMP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5500 25.793 800.0 99716.0 25 0 7546.8 38370 TQRSFYRSSNA 11 106 658.8198180504198 1315.6250831676396 2 658.8200561404228 MULTI CID FTMS 0 0 0 5497 97190.0 0.2615494886418538 -12 0.2029399871826172 3 Unmodified _TQRSFYRSSNA_ ENSG00000023516|ENST00000025301|AKAP11 28.49450938151212 0.4231428536161201 6 DPSQSAN 7 8 77.001 0.0 0.0 5.8528 0.0 0.0 598.3336048810562 0.0 598.3336048810562 0.0 46.507049109530485 0.0 0.0 0 1.8807196863200843 0.0 1.674742501084005 0.0 DPSQSAN 5.8528 - 1812 1 2.054 62821.3 0.4600000083446502 755 4743 5497 SUDHL4_400M_050219_2,5500 SUDHL4_400M_050219_2,5500,TQRSFYRSSNA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5503 25.803 161.0 275470.0 25 0 20415.0 + 13047 HAVGPSTSL 9 77 434.73005450743074 867.4455560816615 2 434.7296020388603 MULTI CID FTMS 0 0 0 5502 268099.03125 0.2868796237486841 -19 0.3101463317871094 1 Unmodified _HAVGPSTSL_ ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12 40.44857923139169 0.0729940656229577 6 [HV]TPNTS{I|L} 8 3 + 30.479 0.0 0.0 3.5136 3.5136 74.38 0.0 0.0 0.0 2.9566769030936584 13.36561841718499 2.9566769030936584 3.060158615989224 0 0.3935078169319297 0.0 0.5451140161145328 0.0 [HV]TPNTS{I|L};[YR]D[KS]S{I|L} 3.5136;3.1608 -;- 75 + 1 2.054 41069.4 1.0 756 4745 5502 SUDHL4_400M_050219_2,5503 SUDHL4_400M_050219_2,5503,HAVGPSTSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5504 25.807 229.0 173030.0 25 0 36998.0 + 42181 VSDSGAHVL 9 76 442.727144210444 883.439735487688 2 442.7270385622978 MULTI CID FTMS 0 0 0 5502 148999.984375 0.4169061676849595 -9 0.1756134033203125 2 Unmodified _VSDSGAHVL_ ENSG00000064102|ENST00000261191|INTS13 20.453626601364224 0.2830276176381075 6 VSD 3 6 44.935 0.0 0.0 5.0864 0.0 0.0 0.0 579.2899874322874 579.2899874322874 22.00318762307696 0.0 0.0 0.0 0 0.1747425010840047 2.0 0.0 0.0 + VSD 5.0864 + + 40 + 1 2.054 37285.0 1.0 757 4745 5502 SUDHL4_400M_050219_2,5504 SUDHL4_400M_050219_2,5504,VSDSGAHVL False True VSDSGAHVL 25.806947 442.727038562298 1791905.0 5502.0 ENSG00000064102|ENST00000261191|INTS13 2.483280499776205 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5505 25.821 797.0 167890.0 25 0 10701.0 + 34813 SQFGGGSQY 9 134 465.7014087663598 929.3882645995196 2 465.7015563845634 MULTI CID FTMS 0 0 0 5502 103163.328125 0.1313670025229011 -14 0.2406730651855468 3 Unmodified _SQFGGGSQY_ ENSG00000100353|ENST00000216190|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 46.020951573049366 0.0490941689151868 6 {[QS]|[NT]}{[WN]|[YH]}S 5 6 22.874 0.0 0.0 2.4612 0.0 0.0 0.0 324.12139383219466 324.12139383219466 0.3997654084889035 0.0 0.0 0.0 0 0.0 1.0 0.805462187404089 0.5866968715561641 {[QS]|[NT]}{[WN]|[YH]}S 2.4612 - 348 1 2.054 108557.7 1.0 758 4745 5502 SUDHL4_400M_050219_2,5505 SUDHL4_400M_050219_2,5505,SQFGGGSQY True True SQFGGGSQY 25.82072 465.701556384563 7420742.0 5502.0 ENSG00000100353|ENST00000216190|EIF3D;;nc|ENSG00000100353|O15371-3|EIF3D 5.950539906819661 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5510 25.849 800.0 139910.0 25 0 23011.0 -1 PMDPVTFIQ 9 106 532.2607205270532 1062.5068881209063 2 532.2614623904228 MULTI CID FTMS 0 0 0 5509 63849.37109375 0.6978684097609293 1 -0.0163822174072265 1 Oxidation (M) _PM(Oxidation (M))DPVTFIQ_ ENSG00000086758|ENST00000262854|HUWE1;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 26.88365393820708 0.1891292719743517 6 {[ES]|[DT]|[{I|L}C]}[HV]{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}Q 9 -1 + 50.556 0.0 0.0 4.7582 4.7582 88.111 0.0 0.0 0.0 3.1234684152074976 37.85335007137462 3.1234684152074976 28.807196863200843 0 0.8807196863200843 0.0 1.4916440611282624 0.0 {[ES]|[DT]|[{I|L}C]}[HV]{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}Q;{[ES]|[DT]|[{I|L}C]}[HV]{M(Oxidation (M))|F}GT{I|L}SS;{[ES]|[DT]|[{I|L}C]}[HV]EHVVQ;{[ES]|[DT]|[{I|L}C]}[HV]EH{I|L}{[NV]|[RG]} 4.7582;2.047;1.9905;1.8032 -;-;-;- 162 1 2.054 90179.6 0.4699999988079071 759 4749 5509 SUDHL4_400M_050219_2,5510 SUDHL4_400M_050219_2,5510,PMDPVTFIQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5513 25.858 5.6 7627300.0 25 0 852940.0 + 6391 DWAKLIKRL 9 68 381.5739774609832 1141.7001029831497 3 381.5741149783134 MULTI CID FTMS 0 0 0 5512 8268338.5 0.9103966052889808 2 -0.0316276550292968 1 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 7.608950283845883 0.6490595679007971 6 {M(Oxidation (M))|F}[QP]K{I|L}K[R{I|L}]{I|L} 9 -1 + 31.092 0.0 0.0 2.7233 2.7233 79.884 0.0 0.0 0.0 19.49864366769575 2.676062401770313 2.676062401770313 9.476212463643424 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[QP]K{I|L}K[R{I|L}]{I|L};[PG]A{M(Oxidation (M))|F}K{I|L}K[R{I|L}]{I|L} 2.7233;1.8933 -;- 33 + 1 2.054 40613.7 1.0 760 4751 5512 SUDHL4_400M_050219_2,5513 SUDHL4_400M_050219_2,5513,DWAKLIKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5514 25.862 212.0 262630.0 25 0 91598.0 + 41531 VPNSVTSQ 8 72 416.2137926336245 0 416.2108947634697 PEAK CID FTMS 0 0 0 5512 153547.9375 0.9277358530466004 2 -0.0316276550292968 2 Unmodified _VPNSVTSQ_ REV__ENST00000565728.5_1_15:31239263-31253097:-|nuORF 7.910154910731844 0.5650536163073903 6 C 1 -1 2.7642 0.0 0.0 0.33287 0.0 0.0 311.1338097772114 413.2449740045532 724.3787837817646 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.33287 - 2 + 1 2.054 49064.3 1.0 761 4751 5512 SUDHL4_400M_050219_2,5514 SUDHL4_400M_050219_2,5514,VPNSVTSQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5515 25.871 494.0 175880.0 25 0 17743.0 + 26462 NTIDPSHPM 9 123 514.2289968246747 1026.443440716149 2 514.2291747927666 MULTI CID FTMS 0 0 0 5512 114786.0859375 0.0268024775070067 -25 0.3663978576660156 3 Oxidation (M) _NTIDPSHPM(Oxidation (M))_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 46.020951573049366 0.0490941689151868 6 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}] 8 4 + 63.637 0.0 0.0 6.1997 6.1997 90.147 0.0 0.0 0.0 46.73754841273228 4.164317917986224 4.164317917986224 9.9271045180595 0 0.6694451763165201 2.0 0.6307196863200843 0.0 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}D[PS]H{M(Oxidation (M))|F}P;{[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}C]|[YS]}AP;{[QS]|[NT]}{I|L}D[WM][{M(Oxidation (M))|F}T];{[QS]|[NT]}D{M(Oxidation (M))|F}{I|L}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}{[QG]|[NA]}N{[MS]|[{M(Oxidation (M))|F}A]}Y;{[QS]|[NT]}D{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}C]|[YS]}AP;{[QS]|[NT]}[YE][TP][R{M(Oxidation (M))|F}];{[QS]|[NT]}D{M(Oxidation (M))|F}[WP][{M(Oxidation (M))|F}T];{[QS]|[NT]}[C(Carbamidomethyl (C))R][WH]GP 6.1997;5.2326;4.5546;3.9909;3.5698;3.1426;1.9247;1.6504;1.3609;1.0097 -;-;-;-;-;-;-;-;-;- 428 + 1 2.054 70837.6 1.0 762 4751 5512 SUDHL4_400M_050219_2,5515 SUDHL4_400M_050219_2,5515,NTIDPSHPM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5516 25.881 572.0 187560.0 25 0 39091.0 + 32224 RVYNWDVKR 9 116 412.5597751575651 1234.6574960728954 3 412.5595275759697 MULTI CID FTMS 0 0 0 5512 86664.7890625 0.8074131595959955 1 -0.027566909790039 4 Unmodified _RVYNWDVKR_ ENSG00000155959|ENST00000286428|VBP1;nc|ENSG00000155959|P61758-2|VBP1 43.77239144664712 0.0547478964384323 6 [RV]YNGDE 7 4 48.025 0.0 0.0 3.8898 0.0 0.0 0.0 398.25405906732175 398.25405906732175 23.38386317766563 0.0 0.0 0.0 0 0.8807196863200843 0.8239087409443188 0.0 1.0044321917401078 [RV]YNGDE 3.8898 - 186 1 2.054 85421.0 1.0 763 4751 5512 SUDHL4_400M_050219_2,5516 SUDHL4_400M_050219_2,5516,RVYNWDVKR True True RVYNWDVKR 25.880761 412.55952757597 545201.3125 5512.0 ENSG00000155959|ENST00000286428|VBP1;;nc|ENSG00000155959|P61758-2|VBP1 6.501202901204427 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5519 25.895 427.0 192050.0 25 0 26071.0 -1 SDGKGMISI 9 104 462.229452505541 922.444352077882 2 462.2299072146416 MULTI CID FTMS 0 0 0 5518 103428.421875 0.5433131203659921 12 -0.1360378265380859 1 Oxidation (M) _SDGKGM(Oxidation (M))ISI_ ENSG00000132670|ENST00000399903|PTPRA;nc|ENSG00000132670|P18433-6|PTPRA 15.847184025352805 0.4077185912009129 6 E[C(Carbamidomethyl (C))R]S{I|L} 5 -1 21.605 0.0 0.0 2.3421 0.0 0.0 259.1462696577633 0.0 259.1462696577633 0.0 16.54303715125956 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 E[C(Carbamidomethyl (C))R]S{I|L} 2.3421 - 110 + 1 2.054 69678.6 1.0 764 4753 5518 SUDHL4_400M_050219_2,5519 SUDHL4_400M_050219_2,5519,SDGKGMISI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5520 25.906 636.0 160640.0 25 0 9795.2 + 26611 NVPWTRTI 8 133 493.77245786107153 985.5303627889432 2 493.7723266482353 MULTI CID FTMS 0 0 0 5518 145195.71875 0.0106430223402306 -18 0.2843704223632812 2 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 39.957323273325 0.2350051964751539 6 ED[RP]GNT{I|L} 8 -1 60.122 0.0 0.0 6.1004 0.0 0.0 85.08980757881015 0.0 85.08980757881015 0.0 39.47328406004017 0.0 0.0 0 1.2302046884880935 0.0 0.6171302707394362 1.0044321917401078 ED[RP]GNT{I|L} 6.1004 - 652 1 2.054 80685.2 1.0 765 4753 5518 SUDHL4_400M_050219_2,5520 SUDHL4_400M_050219_2,5520,NVPWTRTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5521 25.92 800.0 167390.0 25 0 31590.0 + 18201 KVAPAPAVV 9 142 426.2712129439816 850.5278729547631 2 426.2715026736259 MULTI CID FTMS 0 0 0 5518 89385.8671875 0.0718005918762135 -16 0.2554473876953125 3 Unmodified _KVAPAPAVV_ ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF 32.30548876998284 0.1201446275138228 6 [PA]VAKPAVV 9 4 + 62.801 0.0 0.0 7.3837 7.3837 83.058 0.0 0.0 0.0 13.001123851037375 52.422021450650966 13.001123851037375 1.249387366082999 0 1.25 0.8239087409443188 0.0 0.0 [PA]VAKPAVV;[PA]VKAPAVV;[PA]AVKPAVV;[PA]APVKAVV;[PA]APVAKVV;[PA]VAPKAVV;[PA]APAVKVV;[PA]VAPAKVV;[PA]AVPKAVV;[PA]AVPAKVV 7.3837;7.2368;6.8228;6.6474;6.2934;6.2934;6.0864;5.9395;5.7325;5.3785 -;-;-;-;-;-;-;-;-;- 353 1 2.054 106118.6 0.8100000023841858 766 4753 5518 SUDHL4_400M_050219_2,5521 SUDHL4_400M_050219_2,5521,KVAPAPAVV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5523 25.932 457.0 145230.0 25 0 17055.0 + 27604 PLEDMGFIQ 9 86 525.2539808962176 1048.4934088592352 2 525.2535888552666 MULTI CID FTMS 0 0 0 5522 81815.984375 0.2224932545263721 10 -0.0968799591064453 1 Unmodified _PLEDMGFIQ_ REV__ENSG00000089639|ENST00000203556|GMIP;REV__nc|ENSG00000089639|Q9P107-2|GMIP 19.256988751693697 0.3154191944385105 6 {[CA]|SS}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[DN]{I|L}Q 9 -1 + 38.688 0.0 0.0 3.6899 3.6899 79.306 0.0 0.0 0.0 26.698188482496825 0.7636936735113338 0.7636936735113338 8.818785311707025 0 0.9247425010840048 0.958607314841775 0.2887254899964357 0.4247425010840047 {[CA]|SS}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[DN]{I|L}Q;[EP][YV]DW{I|L}Q;[YQ][SG][PA]W{I|L}Q;[EP][YV]D{I|L}WQ;{[SA]|[TG]}[YN][PA]W{I|L}Q;[YQ][SG][PA]{I|L}WQ;{[SA]|[TG]}[YN][PA]{I|L}WQ;{[CA]|SS}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YV][HA] 3.6899;2.8488;2.3206;1.9168;1.7731;1.3887;0.84121;0.33907 -;-;-;-;-;-;-;- 227 + 1 2.054 55906.0 1.0 767 4754 5522 SUDHL4_400M_050219_2,5523 SUDHL4_400M_050219_2,5523,PLEDMGFIQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5526 25.952 800.0 97080.0 25 0 4820.0 + 31236 RLSTPSASTY 10 108 541.7772685414251 1081.53998414965 2 541.7759277224541 MULTI CID FTMS 0 0 0 5525 80834.9921875 0.5933913881483437 -11 0.1388511657714843 1 Unmodified _RLSTPSASTY_ ENSG00000104765|ENST00000380629|BNIP3L;nc|ENSG00000104765|O60238-2|BNIP3L 40.23920728925047 0.1550410903091231 6 {[MG]|[TS]}[RP]VTASTY 10 5 + 51.703 0.0 0.0 4.7805 4.7805 75.078 0.0 0.0 0.0 1.1471309210214358 15.026975159433531 1.1471309210214358 1.1471309210214358 0 1.0 0.0 1.8338395061109685 0.0 {[MG]|[TS]}[RP]VTASTY;{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]VTASTY;{[MG]|[TS]}[R{I|L}]RADTY;{[MG]|[TS]}[R{I|L}][PS]ASTY;AA[W{I|L}]VTASTY;{[WT]|[RM]}[RP]TASTY;{[MG]|[TS]}[R{I|L}][VG]ADTY;{[MG]|[TS]}[R{I|L}]RASEY;{[MG]|[TS]}[R{I|L}][VG]WTY;AA{[RE]|[WV]}{I|L}TASTY 4.7805;4.6745;4.3235;4.3059;3.688;3.5984;3.4721;3.2361;3.1464;2.8253 -;-;-;-;-;-;-;-;-;- 238 1 2.054 66192.9 0.4600000083446502 768 4756 5525 SUDHL4_400M_050219_2,5526 SUDHL4_400M_050219_2,5526,RLSTPSASTY False True RLSTPSASTY 25.952165 541.775927722454 1081519.125 5525.0 ENSG00000104765|ENST00000380629|BNIP3L;;nc|ENSG00000104765|O60238-2|BNIP3L 6.8943610191345215 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5527 25.966 800.0 37405.0 25 0 7124.6 -1 0 39 1081.4491075100705 3241.325493130412 3 1081.784594714642 MULTI CID FTMS 0 0 0 5525 77301.09375 1.0 0 0.0 2 6 C 1 -1 4.6041 0.0 0.0 0.14204 0.0 0.0 2159.784063542324 975.4891451471312 3135.273208689456 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.14204 - 4 + 1 2.054 32472.7 0.3400000035762787 769 4756 5525 SUDHL4_400M_050219_2,5527 SUDHL4_400M_050219_2,5527, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5529 25.971 123.0 581730.0 25 0 57071.0 + -1 MPKLGKARLI 10 79 571.8573147157704 1141.7000764983406 2 571.8574706912041 MULTI CID FTMS 0 0 0 5528 483778.125 0.3818288261241763 13 -0.1381912231445312 1 Oxidation (M) _M(Oxidation (M))PKLGKARLI_ REV__ENSG00000149927|ENST00000350119|DOC2A;REV__ENST00000564233.5_1_16:30020315-30023028:-|nuORF 19.256988751693697 0.5244284437930726 6 K{I|L}KQPE 6 -1 50.693 0.0 0.0 4.4401 0.0 0.0 400.2808246289207 0.0 400.2808246289207 0.0 43.70297202896872 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.4247425010840047 K{I|L}KQPE 4.4401 - 54 1 2.054 58967.1 1.0 770 4757 5528 SUDHL4_400M_050219_2,5529 SUDHL4_400M_050219_2,5529,MPKLGKARLI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5530 25.975 227.0 266770.0 25 0 35395.0 -1 VLFVEDGKME 10 64 591.789793316112 1181.5650336990238 2 591.7898437380791 MULTI CID FTMS 0 0 0 5528 279344.75 0.7505925621153217 11 -0.1121597290039062 2 Oxidation (M) _VLFVEDGKM(Oxidation (M))E_ ENSG00000006125|ENST00000610402|AP2B1;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1 23.78978130925829 0.4341852049148378 6 GK[{M(Oxidation (M))|F}E] 4 -1 36.414 0.0 0.0 3.0819 0.0 0.0 702.3663165132801 0.0 702.3663165132801 0.0 25.15535285883555 0.0 0.0 0 1.5 0.0 1.274227503252014 0.0 GK[{M(Oxidation (M))|F}E] 3.0819 + + 90 + 1 2.054 52128.3 1.0 771 4757 5528 SUDHL4_400M_050219_2,5530 SUDHL4_400M_050219_2,5530,VLFVEDGKME False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5531 25.983 412.0 187830.0 25 0 21061.0 + -1 HAQMTCMM 8 98 484.6748917077613 967.3352304823226 2 484.6739684939384 MULTI CID FTMS 0 0 0 5528 86781.7421875 0.4174205973424723 -4 0.081207275390625 3 Oxidation (M) _HAQMTCMM(Oxidation (M))_ REV__ENSG00000106346|ENST00000306177|USP42;REV__ENST00000479544.6_1_7:6150764-6196715:+|nuORF;REV__nc|ENSG00000106346|Q9H9J4|USP42 5.230669730166228 0.792582437072536 6 YQ 2 -1 25.217 0.0 0.0 2.6068 0.0 0.0 0.0 673.1896837675457 673.1896837675457 10.268024924119672 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 YQ 2.6068 - 47 + 1 2.054 64954.3 1.0 772 4757 5528 SUDHL4_400M_050219_2,5531 SUDHL4_400M_050219_2,5531,HAQMTCMM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5536 26.002 257.0 221370.0 25 0 15781.0 + 2680 ATDPTIHTV 9 108 477.7480843098672 953.4816156865344 2 477.7478820681572 MULTI CID FTMS 0 0 0 5535 220616.78125 0.6123461563915751 8 -0.1053276062011718 1 Unmodified _ATDPTIHTV_ ENSG00000086848|ENST00000616540|ALG9;nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9 57.47134341890925 0.0274820932774257 6 [TA]DPT{I|L}HS{I|L} 9 2 [TA]D + + 37.709 31.439 10.95 3.9548 3.9548 53.981 0.0 0.0 0.0 0.0 6.269736064175966 0.0 0.0 0 0.0 0.0 1.6976212463643423 0.0 [TA]DPT{I|L}HS{I|L} 3.9548 - 251 + 1 2.054 49273.9 1.0 773 4761 5535 SUDHL4_400M_050219_2,5536 SUDHL4_400M_050219_2,5536,ATDPTIHTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5537 26.008 306.0 232250.0 25 0 32995.0 -1 0 87 504.2645116028062 503.2572351362062 1 504.2647582888603 MULTI CID FTMS 0 0 0 5535 161381.359375 0.7664823955697757 -4 0.0287494659423828 2 6 [RV]C(Carbamidomethyl (C)) 3 -1 8.072 0.0 0.0 1.6039 0.0 0.0 0.0 85.03012262515858 85.03012262515858 6.962724883926656 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [RV]C(Carbamidomethyl (C)) 1.6039 - 13 + 1 2.054 61929.5 1.0 774 4761 5535 SUDHL4_400M_050219_2,5537 SUDHL4_400M_050219_2,5537, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5540 26.017 124.0 421810.0 25 0 77988.0 + -1 LLPCCPAAE 9 65 487.2271910885371 972.4398292438742 2 487.2249633669853 MULTI CID FTMS 0 0 0 5539 212968.171875 0.5801644266214725 32 -0.7428207397460938 1 Carbamidomethyl (C) _LLPC(Carbamidomethyl (C))CPAAE_ REV__ENSG00000128159|ENST00000248846|TUBGCP6;REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF;REV__nc|ENSG00000128159|Q96RT7-2|TUBGCP6;REV__nc|ENSG00000128159|Q96RT7-3|TUBGCP6 7.910154910731844 0.6385446671287552 6 {I|L}{I|L}PP 4 -1 40.445 0.0 0.0 4.1592 0.0 0.0 0.0 549.1439913385374 549.1439913385374 30.16772595447483 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}PP 4.1592 - 29 + 1 2.054 46301.5 1.0 775 4763 5539 SUDHL4_400M_050219_2,5540 SUDHL4_400M_050219_2,5540,LLPCCPAAE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5544 26.041 800.0 87267.0 25 0 8911.3 + 25443 NEGRSSVACIQ 11 89 582.2752507291734 1162.5359485251468 2 582.2756835818291 MULTI CID FTMS 0 0 0 5543 75827.421875 0.367840330499984 -6 0.0340328216552734 1 Unmodified _NEGRSSVACIQ_ REV__ENST00000547005.5_1_12:108959188-108962689:+|nuORF 27.22323531849824 0.4529927607131788 6 {[QG]|[NA]}D[DV]{[QG]|[NA]}G{M(Oxidation (M))|F}{I|L} 10 -1 41.338 0.0 0.0 3.5559 0.0 0.0 0.0 143.04508102256662 143.04508102256662 20.10119844074672 0.0 0.0 0.0 0 1.7614393726401687 1.5228787452803376 0.0 0.2887254899964357 {[QG]|[NA]}D[DV]{[QG]|[NA]}G{M(Oxidation (M))|F}{I|L} 3.5559 - 238 1 2.054 55395.0 0.4600000083446502 776 4766 5543 SUDHL4_400M_050219_2,5544 SUDHL4_400M_050219_2,5544,NEGRSSVACIQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5546 26.053 519.0 83657.0 25 0 6992.9 31450 RPQSNWKESAN 11 74 658.8198180504198 1315.6250831676396 2 658.8204833865166 MULTI CID FTMS 0 0 0 5545 122923.921875 0.3308024375785311 12 -0.3050041198730469 1 Unmodified _RPQSNWKESAN_ ENSG00000197077|ENST00000358431|KIAA1671 18.373094154950223 0.6529654022026722 6 PSQSAN 6 6 51.643 0.0 0.0 3.9254 0.0 0.0 713.3599356896569 0.0 713.3599356896569 0.0 34.65350013324773 0.0 0.0 0 1.3935078169319297 0.0 1.2302046884880935 0.0 PSQSAN 3.9254 - 88 1 2.054 38057.5 1.0 777 4767 5545 SUDHL4_400M_050219_2,5546 SUDHL4_400M_050219_2,5546,RPQSNWKESAN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5547 26.067 800.0 138970.0 25 0 16088.0 + -1 MNYAMKMCRPV 11 96 680.3061308692289 1358.5977088052578 2 680.3075439333916 MULTI CID FTMS 0 0 0 5545 88304.4375 0.2945589494314107 -5 0.033639907836914 2 Oxidation (M) _M(Oxidation (M))NYAMKMCRPV_ REV__ENSG00000164930|ENST00000358755|FZD6 13.042465956692816 0.7638483625850725 6 [TP]{M(Oxidation (M))|F}QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 12 -1 + 68.928 0.0 0.0 5.0735 5.0735 82.022 0.0 0.0 0.0 4.8107423125747175 48.26635486293851 4.8107423125747175 6.611814434466197 0 0.9247425010840048 0.0 0.2134679910804404 0.8494850021680094 [TP]{M(Oxidation (M))|F}QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[TP]{M(Oxidation (M))|F}QWN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[TP]{M(Oxidation (M))|F}QDAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[TP]{M(Oxidation (M))|F}QDAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[TP]{M(Oxidation (M))|F}WGAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[TP]{M(Oxidation (M))|F}[AG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[TP]{M(Oxidation (M))|F}QWN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[TP]{M(Oxidation (M))|F}QWGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}{[MG]|[TS]}{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[TP]{M(Oxidation (M))|F}QDAGG{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]} 5.0735;4.5868;4.4038;4.4038;4.0961;4.0912;3.9149;3.9149;3.8164;3.736 -;-;-;-;-;-;-;-;-;- 799 1 2.054 84419.8 0.4399999976158142 778 4767 5545 SUDHL4_400M_050219_2,5547 SUDHL4_400M_050219_2,5547,MNYAMKMCRPV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5548 26.078 651.0 124900.0 25 0 9694.0 + 30704 RVFQGAPKGY 10 120 561.3111059022765 0 561.3123046755791 PEAK CID FTMS 0 0 0 5545 86293.921875 0.4246845438602724 -41 0.5545082092285156 3 Unmodified _RFRTEKER_ nc|ENSG00000005100|Q9H6R0-2|DHX33;ENST00000575153.5_1_17:5347527-5364435:-|nuORF;ENSG00000005100|ENST00000225296|DHX33 7.910154910731844 0.5650536163073903 6 V 1 8 7.7423 0.0 0.0 0.6909 0.0 0.0 560.2862038650372 458.2342012994751 1018.5204051645125 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V 0.6909 - 17 + 1 2.054 71249.2 1.0 779 4767 5545 SUDHL4_400M_050219_2,5548 SUDHL4_400M_050219_2,5548,RFRTEKER False False RVFQGAPKGY 26.078174 561.312304675579 504954.4375 5545.0 nc|ENSG00000005100|Q9H6R0-2|DHX33;;ENST00000575153.5_1_17:5347527-5364435:-|nuORF;;ENSG00000005100|ENST00000225296|DHX33 4.19203249613444 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5550 26.083 106.0 413190.0 25 0 29046.0 + 13048 HAVGPSTSL 9 77 434.73005450743074 867.4455560816615 2 434.7296630740166 MULTI CID FTMS 0 0 0 5549 526675.5625 0.563569687302354 4 -0.0824813842773437 1 Unmodified _HAVGPSTSL_ ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000140262|Q99081-2|TCF12;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000140262|Q99081|TCF12 40.44857923139169 0.0729940656229577 6 [YR]D[KS]S{I|L} 7 6 + 24.058 0.0 0.0 2.7734 2.7734 82.739 0.0 0.0 0.0 3.356888018232098 4.672488015064928 3.356888018232098 24.05796322419299 0 0.0 0.0 0.7614393726401688 0.0 [YR]D[KS]S{I|L} 2.7734 - 44 + 1 2.054 43502.6 1.0 780 4768 5549 SUDHL4_400M_050219_2,5550 SUDHL4_400M_050219_2,5550,HAVGPSTSL True True HAVGPSTSL 26.082978 434.729663074017 11642586.0 5549.0 nc|ENSG00000140262|Q99081-4|TCF12;;nc|ENSG00000140262|Q99081|TCF12;;nc|ENSG00000140262|Q99081-2|TCF12;;ENSG00000140262|ENST00000333725|TCF12 7.353242079416911 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5551 26.086 168.0 234250.0 25 0 19300.0 + 34814 SQFGGGSQY 9 76 465.7014087663598 929.3882645995196 2 465.7011596560478 MULTI CID FTMS 0 0 0 5549 283275.1875 0.3607193849533223 9 -0.2048206329345703 2 Unmodified _SQFGGGSQY_ ENSG00000100353|ENST00000216190|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 24.020572477871973 0.2255576514309169 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}ESQY 7 4 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}ES + + 22.959 10.247 1.652 2.4703 2.4703 50.873 0.0 0.0 0.0 0.0 7.439235916358484 0.0 0.0 0 0.0 0.0 0.0 0.5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}ESQY 2.4703 - 114 + 1 2.054 38523.6 1.0 781 4768 5549 SUDHL4_400M_050219_2,5551 SUDHL4_400M_050219_2,5551,SQFGGGSQY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5552 26.1 800.0 132910.0 25 0 11424.0 + -1 KMKEIAEAY 9 152 549.7787390959633 1097.5429252587264 2 549.7777587771416 MULTI CID FTMS 0 0 0 5549 104889.578125 0.1982834735854121 -7 0.0834102630615234 3 Oxidation (M) _KM(Oxidation (M))KEIAEAY_ ENSG00000109971|ENST00000534624|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000204388|ENST00000375650|HSPA1B;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENSG00000204389|ENST00000375651|HSPA1A;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 32.78568957990786 0.1150597335874693 6 EW{I|L}GK{M(Oxidation (M))|F}AY 8 -1 34.466 0.0 0.0 3.1403 0.0 0.0 85.08979994941562 0.0 85.08979994941562 0.0 18.906782562143007 0.0 0.0 0 1.0 0.0 0.4604093769761875 0.0 EW{I|L}GK{M(Oxidation (M))|F}AY 3.1403 - 2036 1 2.054 84439.2 0.5 782 4768 5549 SUDHL4_400M_050219_2,5552 SUDHL4_400M_050219_2,5552,KMKEIAEAY False False KMKEIAEAY 26.100087 549.777758777142 4282104.0 5549.0 ENSG00000109971|ENST00000534624|HSPA8;;ENSG00000126803|ENST00000247207|HSPA2;;nc|ENSG00000109971|P11142-2|HSPA8;;ENSG00000204388|ENST00000375650|HSPA1B;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENSG00000204389|ENST00000375651|HSPA1A;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 2.961714188257853 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5555 26.109 73.0 579390.0 25 0 63886.0 + 6392 DWAKLIKRL 9 68 381.5739774609832 1141.7001029831497 3 381.5739929080009 MULTI CID FTMS 0 0 0 5554 606039.125 0.0667287583923063 21 -0.5454139709472656 1 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 2.282774691075616 0.8349936567342158 6 K{I|L}K[QP]E 6 -1 24.922 0.0 0.0 2.1828 0.0 0.0 400.2804127423844 0.0 400.2804127423844 0.0 19.436974992327123 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.1828 - 27 1 2.054 39328.3 1.0 783 4770 5554 SUDHL4_400M_050219_2,5555 SUDHL4_400M_050219_2,5555,DWAKLIKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5556 26.123 800.0 109560.0 25 0 8558.8 + 35299 SSQFGGGSQY 10 122 509.2172217723409 1016.4198906114818 2 509.2168151736259 MULTI CID FTMS 0 0 0 5554 108854.546875 0.529657739405349 -4 0.0793018341064453 2 Unmodified _SSQFGGGSQY_ ENSG00000100353|ENST00000216190|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 29.84058131909904 0.2982332456971691 6 [AG]SS{M(Oxidation (M))|F} 5 8 34.723 0.0 0.0 3.4162 0.0 0.0 0.0 564.2056931840006 564.2056931840006 11.764319472944038 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5994850021680094 0.0 [AG]SS{M(Oxidation (M))|F} 3.4162 - 470 1 2.054 71878.3 0.5799999833106995 784 4770 5554 SUDHL4_400M_050219_2,5556 SUDHL4_400M_050219_2,5556,SSQFGGGSQY False True SSQFGGGSQY 26.12282 509.216815173626 967125.5 5554.0 ENSG00000100353|ENST00000216190|EIF3D;;nc|ENSG00000100353|O15371-3|EIF3D 2.61123118797938 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5558 26.128 23.0 2388900.0 25 0 198670.0 + 26463 NTIDPSHPM 9 84 514.2289968246747 1026.443440716149 2 514.2294189333916 MULTI CID FTMS 0 0 0 5557 2501133.75 0.5840131278009707 -5 0.0979022979736328 1 Oxidation (M) _NTIDPSHPM(Oxidation (M))_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 46.020951573049366 0.0490941689151868 6 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}] 8 4 + 65.952 0.0 0.0 6.4253 6.4253 91.665 0.0 0.0 0.0 55.150064313529 5.484550065040281 5.484550065040281 13.06933472159166 0 0.6694451763165201 2.0 0.6861818737241735 0.0 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}D[PS]H{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QS]|[NT]}{[{M(Oxidation (M))|F}D]|MM}{I|L}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}[YE][TP][R{M(Oxidation (M))|F}] 6.4253;5.152;4.0197;1.9437 -;+;-;- + 141 + 1 2.054 47826.8 1.0 785 4771 5557 SUDHL4_400M_050219_2,5558 SUDHL4_400M_050219_2,5558,NTIDPSHPM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5559 26.141 800.0 107080.0 25 0 9931.0 -1 0 94 604.9572503511636 1811.849921653691 3 604.9581176638603 MULTI CID FTMS 0 0 0 5557 103799.03125 0.5840118751596153 -1 0.0186004638671875 2 6 GSGGS{I|L} 6 -1 38.141 0.0 0.0 2.1051 0.0 0.0 842.3996837917736 508.2164738074762 1350.6161575992498 0.0 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.7742275032520141 0.0 GSGGS{I|L} 2.1051 - 745 + 1 2.054 66219.5 0.4600000083446502 786 4771 5557 SUDHL4_400M_050219_2,5559 SUDHL4_400M_050219_2,5559, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5560 26.147 293.0 160340.0 25 0 5478.3 -1 RLMNDMTAV 9 97 541.7522431908448 1081.4899334484894 2 541.7520629763603 MULTI CID FTMS 0 0 0 5557 104205.3984375 0.6410434467834047 -3 0.0446319580078125 3 2 Oxidation (M) _RLM(Oxidation (M))NDM(Oxidation (M))TAV_ ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1 31.26834338654808 0.1333407332142048 6 [R{I|L}]{M(Oxidation (M))|F}ND{M(Oxidation (M))|F}TAV 9 -1 + 42.858 0.0 0.0 3.9629 3.9629 79.957 0.0 0.0 0.0 4.938419519471395 17.922969584511677 4.938419519471395 8.538719643217611 0 0.4247425010840047 0.0 0.5 0.0 [R{I|L}]{M(Oxidation (M))|F}ND{M(Oxidation (M))|F}TAV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[TP]W{M(Oxidation (M))|F}TAV;[R{I|L}]{M(Oxidation (M))|F}GGD{M(Oxidation (M))|F}TAV;[YT][YN][HN]TAV;[R{I|L}]{M(Oxidation (M))|F}ND{M(Oxidation (M))|F}G[{I|L}T];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[TP]W{M(Oxidation (M))|F}G[{I|L}T];[R{I|L}]{M(Oxidation (M))|F}ND[PS]AY;[R{I|L}]{M(Oxidation (M))|F}GGD{M(Oxidation (M))|F}G[{I|L}T] 3.9629;3.1733;3.1114;1.5917;1.374;0.58449;0.5608;0.52259 +;-;-;-;-;-;-;- + 255 1 2.054 40930.8 1.0 787 4771 5557 SUDHL4_400M_050219_2,5560 SUDHL4_400M_050219_2,5560,RLMNDMTAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5561 26.161 800.0 106130.0 25 0 7309.8 + -1 LSDRELCRGL 10 103 609.8143447198952 1217.6141365065905 2 609.8146240115166 MULTI CID FTMS 0 0 0 5557 132693.5625 1.0 0 0.0 4 Carbamidomethyl (C) _LSDRELC(Carbamidomethyl (C))RGL_ REV__ENST00000554169.1_1_14:95999360-96000279:-|nuORF 10.073929032068715 0.6785112666868882 6 [VG]Q[WK]DPSQS 10 -1 62.278 0.0 0.0 5.1148 0.0 0.0 0.0 102.06387782847663 102.06387782847663 47.58532514725495 0.0 0.0 0.0 0 0.3807196863200844 0.9208187539523752 1.5669015600442575 1.1989700043360187 [VG]Q[WK]DPSQS 5.1148 - 415 1 2.054 68086.2 0.5600000023841858 788 4771 5557 SUDHL4_400M_050219_2,5561 SUDHL4_400M_050219_2,5561,LSDRELCRGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5563 26.165 4.6 7553300.0 25 0 360160.0 + 26612 NVPWTRTI 8 74 493.77245786107153 985.5303627889432 2 493.7727538943291 MULTI CID FTMS 0 0 0 5562 11989442.0 0.8788406445551602 1 -0.0201778411865234 1 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 25.399314129420983 0.5099049743284904 6 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L} 9 -1 + 41.634 0.0 0.0 4.2245 4.2245 82.474 0.0 0.0 0.0 1.6407496409399158 33.99797211252192 1.6407496409399158 9.208187539523747 0 1.2302046884880935 0.0 0.0 0.0 {[NV]|[RG]}R{[NV]|[RG]}GNT{I|L};{[NV]|[RG]}R{[NV]|[RG]}GGGT{I|L};{[NV]|[RG]}R[KG][NG]E{I|L};{[NV]|[RG]}R[NP]HH{I|L} 4.2245;3.2901;1.4068;1.0549 -;-;-;- 121 1 2.054 32191.9 1.0 789 4772 5562 SUDHL4_400M_050219_2,5563 SUDHL4_400M_050219_2,5563,NVPWTRTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5564 26.167 72.0 633750.0 25 0 151870.0 + 18202 KVAPAPAVV 9 64 426.2712129439816 850.5278729547631 2 426.2709838747978 MULTI CID FTMS 0 0 0 5562 817832.625 0.6569368109110779 3 -0.0669097900390625 2 Unmodified _KVAPAPAVV_ ENSG00000148303|ENST00000323345|RPL7A;ENST00000424041.1_1_20:36073469-36073910:-|nuORF;ENST00000463740.5_1_9:136215098-136217195:+|nuORF 21.74664581756881 0.2544899275067181 6 HQVKAVV 7 6 36.899 0.0 0.0 4.3383 0.0 0.0 71.07430464912265 0.0 71.07430464912265 0.0 19.90881044962109 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 HQVKAVV 4.3383 - 133 1 2.054 44299.8 1.0 790 4772 5562 SUDHL4_400M_050219_2,5564 SUDHL4_400M_050219_2,5564,KVAPAPAVV False True KVAPAPAVV 26.167144 426.270983874798 12905145.0 5562.0 ENST00000463740.5_1_9:136215098-136217195:+|nuORF;;ENSG00000148303|ENST00000323345|RPL7A;;ENST00000424041.1_1_20:36073469-36073910:-|nuORF 5.960974375406901 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5565 26.175 415.0 198330.0 25 0 15077.0 + -1 KVMSVGQNY 9 120 521.2550561003217 1040.4955592674432 2 521.2548095583916 MULTI CID FTMS 0 0 0 5562 200526.90625 0.9192505360083048 -3 0.0605640411376953 3 Oxidation (M) _KVM(Oxidation (M))SVGQNY_ chr4:67606389-67607194|48|46.31|0.9|5.69|+|ENST00000396225|STAP1,STAP1;ENSG00000035720|ENST00000265404|STAP1 31.26834338654808 0.1333407332142048 6 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}KDQNY 8 -1 + 33.842 0.0 0.0 3.2525 3.2525 71.971 0.0 0.0 0.0 0.5216941166433742 26.852547451730544 0.5216941166433742 1.9478286616271097 0 0.805462187404089 0.0 0.0 0.3494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}KDQNY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[VS]GQNY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}KD[AG]NY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}KDQGGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[VS]G[AG]NY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[VS]GQGGY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}KD[AG]GGY;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[Y{I|L}][KP]NY;[AG]G[YT]A[KP]NY;{[QG]|[NA]}[YT]A[KP]NY 3.2525;3.0653;2.3623;2.3623;2.1803;2.1803;1.4774;1.1997;1.1946;1.1014 -;+;-;-;-;-;-;-;-;- + 315 1 2.054 67380.9 1.0 791 4772 5562 SUDHL4_400M_050219_2,5565 SUDHL4_400M_050219_2,5565,KVMSVGQNY False False KVMSVGQNY 26.174553 521.254809558392 944654.25 5562.0 chr4:67606389-67607194|48|46.31|0.9|5.69|+|ENST00000396225|STAP1,STAP1;;ENSG00000035720|ENST00000265404|STAP1 3.801718235015869 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5566 26.181 349.0 250520.0 25 0 29317.0 + 40588 VKSSVCLEAY 10 116 366.8548358855839 0 366.8548766970634 PEAK CID FTMS 0 0 0 5562 131893.46875 0.6573779603468133 -2 0.0564498901367187 4 Unmodified _VKSSVCLEAY_ ENSG00000076344|ENST00000397770|RGS11;nc|ENSG00000076344|O94810-2|RGS11;nc|ENSG00000076344|O94810-3|RGS11 5.731851221503515 0.3961065659209837 6 S 1 9 3.9794 0.0 0.0 0.54386 0.0 0.0 296.46344266784905 345.1817721002563 641.6452147681053 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + S 0.54386 + + 23 + 1 2.054 73683.3 1.0 792 4772 5562 SUDHL4_400M_050219_2,5566 SUDHL4_400M_050219_2,5566,VKSSVCLEAY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5568 26.196 637.0 149450.0 25 0 13755.0 + 12263 GQYSTGKTTF 10 119 545.2642968829012 1088.5140408326024 2 545.2642089724541 MULTI CID FTMS 0 0 0 5567 140753.46875 0.819476086770627 -1 0.0201778411865234 1 Unmodified _GQYSTGKTTF_ EHD1|p.T93Pfs*111|1|0.12|ENSG00000110047|chr11:64878189-64878189|G/-|frameshift_variant;ENSG00000013016|ENST00000322054|EHD3;ENSG00000103966|ENST00000220325|EHD4;ENSG00000110047|ENST00000320631|EHD1;ENST00000569223.1_1_15:42235208-42264692:-|nuORF;nc|ENSG00000013016|Q9NZN3-2|EHD3 53.40400417844725 0.0601721406801337 6 {[QG]|[NA]}YSTG[KT]T{M(Oxidation (M))|F} 10 0 + 46.103 0.0 0.0 4.2354 4.2354 76.277 0.0 0.0 0.0 0.7480310337787515 1.0924374808178143 0.7480310337787515 3.0102999566398125 0 0.8807196863200843 0.619788758288394 1.079689690656103 0.0 + + {[QG]|[NA]}YSTG[KT]T{M(Oxidation (M))|F};{[QG]|[NA]}YST[RK]C{M(Oxidation (M))|F};[KG]TTSYT{M(Oxidation (M))|F}{[QG]|[NA]};[KG]TSTYT{M(Oxidation (M))|F}{[QG]|[NA]};[KG]TTSTY{M(Oxidation (M))|F}{[QG]|[NA]};[KG]TTST{M(Oxidation (M))|F}Y{[QG]|[NA]};{[QG]|[NA]}Y[RP]H{M(Oxidation (M))|F}{[QG]|[NA]};[KG]TSTTY{M(Oxidation (M))|F}{[QG]|[NA]};[KG]TTTSY{M(Oxidation (M))|F}{[QG]|[NA]};[KG]TSYTT{M(Oxidation (M))|F}{[QG]|[NA]} 4.2354;3.9588;3.9135;3.4752;3.0616;2.8554;2.839;2.6232;2.5658;2.4837 +;-;-;-;-;-;-;-;-;- + 1190 + 1 2.054 79852.4 1.0 793 4773 5567 SUDHL4_400M_050219_2,5568 SUDHL4_400M_050219_2,5568,GQYSTGKTTF True True GQYSTGKTTF 26.19584 545.264208972454 841437.25 5567.0 ENST00000569223.1_1_15:42235208-42264692:-|nuORF;;nc|ENSG00000013016|Q9NZN3-2|EHD3;;ENSG00000103966|ENST00000220325|EHD4;;ENSG00000013016|ENST00000322054|EHD3;;EHD1|p.T93Pfs*111|1|0.12|ENSG00000110047|chr11:64878189-64878189|G/-|frameshift_variant;;ENSG00000110047|ENST00000320631|EHD1 7.298782189687093 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5569 26.21 800.0 89723.0 25 0 24013.0 -1 0 35 1177.8021778313398 3530.38470409422 3 1178.136767566204 MULTI CID FTMS 0 0 0 5567 158262.9375 0.551029974058881 -4 0.0807418823242187 2 6 G 1 -1 6.9897 0.0 0.0 0.19799 0.0 0.0 2147.756103519192 1322.5880244170703 3470.344127936262 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19799 - 4 + 1 2.054 65116.2 0.449999988079071 794 4773 5567 SUDHL4_400M_050219_2,5569 SUDHL4_400M_050219_2,5569, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5570 26.224 800.0 94732.0 25 0 13374.0 -1 NMPKFDSLWDY 11 75 716.3166526372258 1430.6187523412516 2 716.3179199099541 MULTI CID FTMS 0 0 0 5567 97401.15625 0.9710592389575567 -1 0.0201778411865234 3 Oxidation (M) _NM(Oxidation (M))PKFDSLWDY_ ENSG00000197928|ENST00000598513|ZNF677 11.494710602746466 0.7960433852372589 6 [NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 12 -1 + 67.968 0.0 0.0 4.751 4.751 75.988 0.0 0.0 0.0 3.309710622901207 45.45039703980875 3.309710622901207 1.7609125905568137 0 0.9247425010840048 0.958607314841775 0.3807196863200844 0.8494850021680094 [NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}NE{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NE{M(Oxidation (M))|F}M{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}EN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}EGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{[YD]|[{M(Oxidation (M))|F}M]}E{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}NE{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}GGE{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEE[MN][{I|L}P];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}ENE[MN][{I|L}P] 4.751;4.6279;4.1892;4.115;4.115;3.9975;3.9919;3.9919;3.7738;3.6507 -;-;-;-;-;-;-;-;-;- 510 1 2.054 58143.2 0.4600000083446502 795 4773 5567 SUDHL4_400M_050219_2,5570 SUDHL4_400M_050219_2,5570,NMPKFDSLWDY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5573 26.234 231.0 310410.0 25 0 30890.0 + 6815 EEAPSRPAL 9 86 485.2532415078942 968.4919300825884 2 485.2541076540947 MULTI CID FTMS 0 0 0 5572 222124.765625 0.040054466129529 -7 0.1493911743164062 1 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 29.081581746732265 0.1611639662936252 6 EEAPSR[PA]{I|L} 9 0 + 40.428 0.0 0.0 4.1743 4.1743 85.004 0.0 0.0 0.0 24.4242603845808 1.9281195628315828 1.9281195628315828 16.197887582883936 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + + EEAPSR[PA]{I|L};EEK[WP][PA]{I|L};[PS]R[SG]{I|L}{I|L}[HC] 4.1743;2.5018;1.1042 +;-;- + 120 + 1 2.054 56522.5 1.0 796 4775 5572 SUDHL4_400M_050219_2,5573 SUDHL4_400M_050219_2,5573,EEAPSRPAL False True EEAPSRPAL 26.234448 485.254107654095 80519454.0 5572.0 nc|ENSG00000173349|Q587I9|SFT2D3 6.902249972025554 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 5574 26.248 800.0 154890.0 25 0 13346.0 + -1 RCLCCSPAF 9 115 585.7438612417332 1169.4731695502662 2 585.7441894412041 MULTI CID FTMS 0 0 0 5572 132338.796875 0.8942697127597425 -1 0.0040435791015625 2 3 Carbamidomethyl (C) _RC(Carbamidomethyl (C))LC(Carbamidomethyl (C))C(Carbamidomethyl (C))SPAF_ REV__ENST00000481165.5_1_1:32050098-32051133:+|nuORF;REV__nc|ENSG00000142910|Q9GZM7-2|TINAGL1 14.838274106304384 0.4350285940865338 6 DEAQQNA{M(Oxidation (M))|F} 8 -1 71.992 0.0 0.0 6.156 0.0 0.0 248.09126479316564 0.0 248.09126479316564 0.0 41.80282340226212 0.0 0.0 0 0.8494850021680094 0.0 0.7134679910804405 0.4247425010840047 DEAQQNA{M(Oxidation (M))|F} 6.156 - 1070 1 2.054 92693.5 0.6000000238418579 797 4775 5572 SUDHL4_400M_050219_2,5574 SUDHL4_400M_050219_2,5574,RCLCCSPAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5575 26.262 800.0 168150.0 25 0 17632.0 + 9498 FLDNERHEV 9 128 579.7801784182736 1157.5458039033472 2 579.7805053591728 MULTI CID FTMS 0 0 0 5572 136075.515625 0.8410156388065518 1 -0.051370620727539 3 Unmodified _FLDNERHEV_ ENSG00000123143|ENST00000242783|PKN1;ENST00000585839.5_1_19:14544333-14578454:+|nuORF;nc|ENSG00000123143|Q16512-2|PKN1;nc|ENSG00000123143|Q16512-3|PKN1 80.6760300276096 0.0173529540220427 6 PREND{I|L}E 7 7 76.503 0.0 0.0 6.609 0.0 0.0 286.12813002754064 0.0 286.12813002754064 0.0 38.05925402426212 0.0 0.0 0 1.1861818737241734 0.0 1.0 0.9163865622122672 PREND{I|L}E 6.609 - 1725 1 2.054 103601.0 0.5799999833106995 798 4775 5572 SUDHL4_400M_050219_2,5575 SUDHL4_400M_050219_2,5575,FLDNERHEV True True FLDNERHEV 26.262113 579.780505359173 671334.3125 5572.0 nc|ENSG00000123143|Q16512-3|PKN1;;ENSG00000123143|ENST00000242783|PKN1;;nc|ENSG00000123143|Q16512-2|PKN1;;ENST00000585839.5_1_19:14544333-14578454:+|nuORF 7.547155857086182 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5576 26.27 426.0 282470.0 25 0 145100.0 -1 0 84 436.2358299018039 435.22855343520393 1 436.2358276247978 MULTI CID FTMS 0 0 0 5572 140172.03125 0.2657357385288843 -4 0.1047592163085937 4 6 T 1 -1 3.9794 0.0 0.0 0.91432 0.0 0.0 141.0701499701633 190.08790002994377 331.1580500001071 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.91432 - 10 + 1 2.054 100736.7 1.0 799 4775 5572 SUDHL4_400M_050219_2,5576 SUDHL4_400M_050219_2,5576, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5577 26.279 525.0 214890.0 25 0 34077.0 + 30064 QVAPVANSY 9 140 474.7431483638545 947.471743794509 2 474.7427856326103 MULTI CID FTMS 0 0 0 5572 97500.90625 0.2522300119072478 -5 0.1233596801757812 5 Unmodified _QVAPVANSY_ ENSG00000157557|ENST00000360938|ETS2 39.957323273325 0.0756908302845263 6 {[QV]|[N{I|L}]|[RA]|[KV]}APVA 6 3 29.07 0.0 0.0 3.0681 0.0 0.0 0.0 379.1260766404653 379.1260766404653 -2.163637706194628 0.0 -2.163637706194628 0.0 0 0.0 1.6989700043360187 0.0 0.649649864804614 + {[QV]|[N{I|L}]|[RA]|[KV]}APVA 3.0681 + + 475 1 2.054 88858.2 1.0 800 4775 5572 SUDHL4_400M_050219_2,5577 SUDHL4_400M_050219_2,5577,QVAPVANSY True True QVAPVANSY 26.278934 474.74278563261 1773116.75 5572.0 ENSG00000157557|ENST00000360938|ETS2 7.869391441345215 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5580 26.288 142.0 391860.0 25 0 57591.0 + 31344 RMSDKVDQ 8 77 489.7351835225543 977.4558141119086 2 489.7355834841728 MULTI CID FTMS 0 0 0 5579 318968.125 0.2730269106036402 -4 0.1021614074707031 1 Unmodified _RMSDKVDQ_ REV__ENSG00000141748|ENST00000269586|ARL5C 21.53697664764585 0.591232569029014 6 {[CA]|SS}{I|L}SD[QT]{I|L}Q 9 -1 + 61.889 0.0 0.0 6.3316 6.3316 80.469 0.0 0.0 0.0 18.027194418743804 13.455612550363796 13.455612550363796 1.249387366082999 0 0.9247425010840048 1.154901959985743 0.2742275032520141 0.4247425010840047 {[CA]|SS}{I|L}SD[QT]{I|L}Q;{[CA]|SS}S{I|L}D[QT]{I|L}Q;{[CA]|SS}D{I|L}S[QT]{I|L}Q;{[CA]|SS}{I|L}DS[QT]{I|L}Q;{[CA]|SS}D{I|L}[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}{I|L}SWRDQ;{[CA]|SS}{I|L}D[C(Carbamidomethyl (C))R]{I|L}Q;{[CA]|SS}S{I|L}W[RD]Q;{[CA]|SS}D{[CP]|[EA]}[KT]{I|L}Q;{[CA]|SS}S[{M(Oxidation (M))|F}V][NP]{I|L}Q 6.3316;6.2038;6.2038;6.0237;5.5685;5.4568;5.3883;5.0803;4.3768;4.0545 -;-;-;-;-;-;-;-;-;- 255 + 1 2.054 48732.9 1.0 801 4777 5579 SUDHL4_400M_050219_2,5580 SUDHL4_400M_050219_2,5580,RMSDKVDQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5581 26.297 514.0 158360.0 25 0 15871.0 + 42316 VSVQPRQSL 9 96 507.2908166031772 1012.5670802731544 2 507.2908508181572 MULTI CID FTMS 0 0 0 5579 139435.703125 0.858007124896834 3 -0.0948238372802734 2 Unmodified _VSVQPRQSL_ ENST00000332629.6_1_3:196293846-196293930:-|nuORF 39.94969957227396 0.0757326808254658 6 VSVQ{I|L} 5 4 58.549 0.0 0.0 5.7822 0.0 0.0 0.0 483.2349337213501 483.2349337213501 46.76599703664159 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.3807196863200844 VSVQ{I|L} 5.7822 - 136 + 1 2.054 65416.7 1.0 802 4777 5579 SUDHL4_400M_050219_2,5581 SUDHL4_400M_050219_2,5581,VSVQPRQSL True True VSVQPRQSL 26.297436 507.290850818157 716991.375 5579.0 ENST00000332629.6_1_3:196293846-196293930:-|nuORF 4.777914841969808 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5583 26.314 800.0 119000.0 25 0 9500.7 + 42002 VQPSKFNSY 9 117 535.2690582236797 1068.5235635141594 2 535.2690917849541 MULTI CID FTMS 0 0 0 5582 97502.0546875 1.0 0 0.0 1 Unmodified _VQPSKFNSY_ ENSG00000126012|ENST00000375401|KDM5C;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-3|KDM5C;nc|ENSG00000126012|P41229-4|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C 30.63653989081413 0.1413794767160703 6 [KS]P{M(Oxidation (M))|F}GGSYQV 10 8 + 42.278 0.0 0.0 3.9566 3.9566 72.41 0.0 0.0 0.0 2.2969624387961503 26.308510325874863 2.2969624387961503 1.0526595187979382 0 0.0 0.0 0.9916440611282626 0.0 [KS]P{M(Oxidation (M))|F}GGSYQV;[KS]P{M(Oxidation (M))|F}NSYQV;[PS]K{M(Oxidation (M))|F}GGSYQV;[PS]K{M(Oxidation (M))|F}NSYQV;[KS]P{M(Oxidation (M))|F}GGSY[AG]V;[KS]P{M(Oxidation (M))|F}NSY[AG]V;[KA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGSYQV;[KA]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NSYQV;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VVGGSYQV;[PS]K{M(Oxidation (M))|F}GGSY[AG]V 3.9566;3.8581;3.5299;3.4314;3.099;2.9964;2.9779;2.8794;2.7464;2.6723 -;-;-;-;-;-;-;-;-;- 371 1 2.054 84581.5 0.4799999892711639 803 4778 5582 SUDHL4_400M_050219_2,5583 SUDHL4_400M_050219_2,5583,VQPSKFNSY False True VQPSKFNSY 26.313806 535.269091784954 493091.65625 5582.0 nc|ENSG00000126012|P41229-2|KDM5C;;nc|ENSG00000126012|P41229-3|KDM5C;;nc|ENSG00000126012|P41229-4|KDM5C;;ENSG00000126012|ENST00000375401|KDM5C;;nc|ENSG00000126012|P41229-5|KDM5C 0.8239566584428152 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5584 26.323 531.0 126290.0 25 0 12649.0 + 8042 ENKSCNDKLQ 10 80 618.2862084367579 1234.5578639403157 2 618.2872192263603 MULTI CID FTMS 0 0 0 5582 111899.3046875 0.8697271416948381 -1 0.0144252777099609 2 Carbamidomethyl (C) _ENKSC(Carbamidomethyl (C))NDKLQ_ ENSG00000138193|ENST00000371380|PLCE1;nc|ENSG00000138193|Q9P212-2|PLCE1 43.77239144664712 0.1177314611616471 6 {[QD]|[EN]|[WG]|[KD]|[RS]}EQVGDG{M(Oxidation (M))|F}{I|L}Q 11 6 + 58.396 0.0 0.0 4.7301 4.7301 85.69 0.0 0.0 0.0 5.835460514500745 47.344182224328506 5.835460514500745 11.665090889956671 0 2.242992819099939 0.0 0.3494850021680094 0.7302046884880937 {[QD]|[EN]|[WG]|[KD]|[RS]}EQVGDG{M(Oxidation (M))|F}{I|L}Q;[TP]{I|L}[C(Carbamidomethyl (C))Q]GDG{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}EQV[DN]{M(Oxidation (M))|F}{I|L}Q;{[QS]|[NT]}[C(Carbamidomethyl (C))H]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}G{M(Oxidation (M))|F}{I|L}Q;[{I|L}T]P[C(Carbamidomethyl (C))Q]GDG{M(Oxidation (M))|F}{I|L}Q;[TP]{I|L}[C(Carbamidomethyl (C))Q][DN]{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}EQV[{M(Oxidation (M))|F}V]ENQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[YT][HN]A{I|L}Q;[{I|L}T]P[C(Carbamidomethyl (C))Q][DN]{M(Oxidation (M))|F}{I|L}Q;[TP]{I|L}[C(Carbamidomethyl (C))Q][{M(Oxidation (M))|F}V]ENQ 4.7301;3.7853;3.4102;2.8924;2.762;2.4653;2.2986;2.0557;1.4421;1.3537 -;-;-;-;-;-;-;-;-;- 226 1 2.054 56870.3 1.0 804 4778 5582 SUDHL4_400M_050219_2,5584 SUDHL4_400M_050219_2,5584,ENKSCNDKLQ True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5585 26.337 800.0 131710.0 25 0 20295.0 -1 0 123 455.2489136522221 454.2416371856221 1 458.2590209841728 MULTI CID FTMS 0 0 0 5582 91159.796875 0.9826140170650542 1 -0.0488739013671875 3 6 Y 1 -1 12.764 0.0 0.0 2.81 0.0 0.0 273.167355424683 0.0 273.167355424683 0.0 1.7951097132083405 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.81 - 75 + 1 2.054 88865.1 0.4099999964237213 805 4778 5582 SUDHL4_400M_050219_2,5585 SUDHL4_400M_050219_2,5585, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5586 26.346 529.0 219650.0 25 0 42656.0 + 25549 NESPNGYRLQ 10 107 589.2827953541853 1176.5510377751705 2 589.2840453982353 MULTI CID FTMS 0 0 0 5582 106087.796875 0.8182801016676676 -2 0.0184841156005859 4 Unmodified _NESPNGYRLQ_ REV__ENSG00000126016|ENST00000371959|AMOT 36.506200033944 0.1944608063770638 6 {[QD]|[EN]|[WG]|[KD]|[RS]}AR{[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F}{I|L}Q 10 -1 + 52.643 0.0 0.0 4.4744 4.4744 77.138 0.0 0.0 0.0 3.08094652042314 9.164539485499256 3.08094652042314 3.08094652042314 0 1.774227503252014 0.0 0.3252574989159953 0.3054621874040891 {[QD]|[EN]|[WG]|[KD]|[RS]}AR{[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F}{I|L}Q;[AG]DAR{[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}AR{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}A[VG]{[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F}{I|L}Q;[AG]DA[VG]{[QD]|[EN]|[WG]|[KD]|[RS]}G{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}AQQ{[CP]|[EA]}{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}A[VG]{[WN]|[YH]}{M(Oxidation (M))|F}{I|L}Q;[AG]DAQQ{[CP]|[EA]}{M(Oxidation (M))|F}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}A[HA][{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}{I|L}Q;{[QS]|[NT]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HT]G{M(Oxidation (M))|F}{I|L}Q 4.4744;4.2125;3.9192;3.6954;3.4366;3.3501;3.1365;3.0883;2.948;2.9468 -;-;-;-;-;-;-;-;-;- 399 1 2.054 91522.8 1.0 806 4778 5582 SUDHL4_400M_050219_2,5586 SUDHL4_400M_050219_2,5586,NESPNGYRLQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5588 26.364 800.0 125150.0 25 0 17781.0 + -1 PMEFIVLAY 9 127 549.7787390959633 1097.5429252587264 2 549.7785522341728 MULTI CID FTMS 0 0 0 5587 88080.109375 0.1665068193890976 4 -0.1641712188720703 1 Oxidation (M) _PM(Oxidation (M))EFIVLAY_ REV__ENSG00000027644|ENST00000368195|INSRR 16.942295170755138 0.3780752226737986 6 {I|L}EAY 4 -1 32.155 0.0 0.0 2.9297 0.0 0.0 603.3065221770061 0.0 603.3065221770061 0.0 16.665090889956673 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}EAY 2.9297 - 705 1 2.054 81618.2 0.8899999856948853 807 4779 5587 SUDHL4_400M_050219_2,5588 SUDHL4_400M_050219_2,5588,PMEFIVLAY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5589 26.378 800.0 219270.0 25 0 15083.0 -1 0 81 877.0035936818679 4379.981586076339 5 877.4058715701103 MULTI CID FTMS 0 0 0 5587 72069.2578125 0.3493919506340013 -1 0.0488739013671875 2 6 AASA 4 -1 21.938 0.0 0.0 0.50087 0.0 0.0 584.1380832879466 3492.6746185736347 4076.812701861581 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AASA 0.50087 - 60 + 1 2.054 124318.7 0.3600000143051147 808 4779 5587 SUDHL4_400M_050219_2,5589 SUDHL4_400M_050219_2,5589, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5591 26.385 251.0 255970.0 25 0 22987.0 + -1 PQMLLKLRK 9 89 381.5739774609832 1141.7001029831497 3 381.5739318728447 MULTI CID FTMS 0 0 0 5590 159154.8125 0.0175239561146903 31 -0.5503482818603516 1 Oxidation (M) _PQM(Oxidation (M))LLKLRK_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 8.155526934196011 0.6299788542272896 6 K{I|L}K[QP]E 6 -1 24.191 0.0 0.0 2.1188 0.0 0.0 400.2801075666032 0.0 400.2801075666032 0.0 9.58679110921434 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.1188 - 43 1 2.054 55583.1 1.0 809 4780 5590 SUDHL4_400M_050219_2,5591 SUDHL4_400M_050219_2,5591,PQMLLKLRK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5592 26.391 355.0 152580.0 25 0 14236.0 + 31196 RLQEDPPAGV 10 88 541.2854510866874 1080.5563492401748 2 541.2848998904228 MULTI CID FTMS 0 0 0 5590 130406.671875 0.9664436920994004 -8 0.2171630859375 2 Unmodified _RLQEDPPAGV_ ENSG00000077721|ENST00000371558|UBE2A;nc|ENSG00000077721|P49459-2|UBE2A 29.84058131909904 0.2982332456971691 6 [VG][RD]VDP[PA]GV 11 5 + 55.107 0.0 0.0 5.0999 5.0999 80.312 0.0 0.0 0.0 5.581567732795563 36.38422294881795 5.581567732795563 4.247425010840047 0 1.6549471895720984 1.6989700043360187 0.4247425010840047 0.0 [VG][RD]VDP[PA]GV;[VG][VS]PSD[HK]GV;[QT]{I|L}PSD[HK]GV;[VG][RD]VDP[QP]V;[VG][VS]PSDP[PA]R;[QT]{I|L}PSDP[PA]R;[PA]WWTP[PA]R;[PA]WWT[HK]GV 5.0999;4.7068;4.4564;4.0983;3.9614;3.7109;2.9312;2.8208 -;-;-;-;-;-;-;- 345 1 2.054 52688.0 1.0 810 4780 5590 SUDHL4_400M_050219_2,5592 SUDHL4_400M_050219_2,5592,RLQEDPPAGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5593 26.405 800.0 50712.0 25 0 13872.0 -1 0 34 1168.477451216872 3502.410524250816 3 1168.810961902142 MULTI CID FTMS 0 0 0 5590 96482.65625 0.6753076231394807 -2 0.0803985595703125 3 6 G 1 -1 6.9897 0.0 0.0 0.19957 0.0 0.0 2147.7557990874698 1294.6141626713088 3442.3699617587786 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19957 - 1 + 1 2.054 42465.0 0.3499999940395355 811 4780 5590 SUDHL4_400M_050219_2,5593 SUDHL4_400M_050219_2,5593, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5594 26.419 800.0 70519.0 25 0 5161.7 -1 0 59 1096.0040180884005 4379.986966487202 4 1096.503710925579 MULTI CID FTMS 0 0 0 5590 70345.1875 1.0 0 0.0 4 6 ASA 3 -1 18.377 0.0 0.0 0.41956 0.0 0.0 3575.658125676049 572.2000826471311 4147.85820832318 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.0 ASA 0.41956 - 25 + 1 2.054 44267.0 0.3300000131130218 812 4780 5590 SUDHL4_400M_050219_2,5594 SUDHL4_400M_050219_2,5594, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5596 26.424 32.0 1281800.0 25 0 112010.0 + 26464 NTIDPSHPM 9 66 514.2289968246747 1026.443440716149 2 514.2292358279228 MULTI CID FTMS 0 0 0 5595 1448082.75 0.3381263941371112 5 -0.1642494201660156 1 Oxidation (M) _NTIDPSHPM(Oxidation (M))_ ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1 43.85829265575387 0.0542763391141878 6 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}] 8 4 + 62.708 0.0 0.0 6.1093 6.1093 86.774 0.0 0.0 0.0 51.73902187720806 6.989700043360188 6.989700043360188 8.293037728310253 0 0.7302046884880937 2.0 0.0 0.0 {[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}D[R{M(Oxidation (M))|F}];{[QS]|[NT]}{I|L}DPSH{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};{[QS]|[NT]}{I|L}D{M(Oxidation (M))|F}W[MT];{[QS]|[NT]}[YE][TP][R{M(Oxidation (M))|F}] 6.1093;5.3013;5.2294;2.2799 -;+;-;- + 154 + 1 2.054 37558.9 1.0 813 4781 5595 SUDHL4_400M_050219_2,5596 SUDHL4_400M_050219_2,5596,NTIDPSHPM True False NTIDPSHPM 26.424093 514.229235827923 94714140.0 5595.0 nc|ENSG00000090861|P49588-2|AARS1;;ENSG00000090861|ENST00000261772|AARS1 10.059208393096924 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5597 26.432 454.0 194300.0 25 0 36526.0 + 1753 ALRDNSTMGY 10 113 572.2579663599809 1142.5013797867616 2 572.2583495974541 MULTI CID FTMS 0 0 0 5595 133032.984375 0.3927765758743662 -2 0.0728721618652343 2 Oxidation (M) _ALRDNSTM(Oxidation (M))GY_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88814417-88815164:+|nuORF;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P 45.739877483867886 0.1051543674217965 6 [{I|L}A]RDNST{M(Oxidation (M))|F}GY 10 0 + 63.604 0.0 0.0 5.5671 5.5671 86.208 0.0 0.0 0.0 4.728858883601944 36.18128381088879 4.728858883601944 9.164539485499262 0 1.5 0.958607314841775 0.75 0.0 + + [{I|L}A]RDNST{M(Oxidation (M))|F}GY;[{I|L}A]RDGGST{M(Oxidation (M))|F}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}V]NST{M(Oxidation (M))|F}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}R{[VA]|[{I|L}G]}ST{M(Oxidation (M))|F}GY;[YG]T[VS][H{I|L}]{M(Oxidation (M))|F}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}R[KT]E{M(Oxidation (M))|F}GY;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}V]GGST{M(Oxidation (M))|F}GY;[{I|L}A]RDNSG[{M(Oxidation (M))|F}T]Y;[{I|L}A]RDGGSG[{M(Oxidation (M))|F}T]Y;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}V]NSG[{M(Oxidation (M))|F}T]Y 5.5671;4.7649;4.5228;4.438;3.9037;3.7357;3.7207;2.4154;1.6132;1.3711 +;-;-;-;-;-;-;-;-;- + 545 1 2.054 71079.2 1.0 814 4781 5595 SUDHL4_400M_050219_2,5597 SUDHL4_400M_050219_2,5597,ALRDNSTMGY True False ALRDNSTMGY 26.432391 572.258349597454 1407770.75 5595.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;ENSG00000096384|ENST00000371646|HSP90AB1;;ENST00000518337.1_1_8:74128289-74128592:-|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1;;nc|ENSG00000183199|Q58FF7|HSP90AB3P;;ENST00000505987.1_1_4:88814417-88815164:+|nuORF 7.28377644220988 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5598 26.438 294.0 154620.0 25 0 12830.0 + 10483 FTQAARTSL 9 73 497.769132172287 993.523711411374 2 497.7690307497978 MULTI CID FTMS 0 0 0 5595 120839.0078125 1.0 0 0.0 3 Unmodified _FTQAARTSL_ ENSG00000128886|ENST00000319359|ELL3;ENST00000497700.1_1_15:44068610-44069126:-|nuORF 43.85829265575387 0.0542763391141878 6 AQET 4 7 23.742 0.0 0.0 2.3897 0.0 0.0 546.3116322248062 0.0 546.3116322248062 0.0 9.76280941356464 0.0 0.0 0 0.6677353201839438 0.0 0.0 0.3252574989159953 AQET 2.3897 - 69 1 2.054 38899.9 1.0 815 4781 5595 SUDHL4_400M_050219_2,5598 SUDHL4_400M_050219_2,5598,FTQAARTSL True True FTQAARTSL 26.437768 497.769030749798 462941.125 5595.0 ENSG00000128886|ENST00000319359|ELL3;;ENST00000497700.1_1_15:44068610-44069126:-|nuORF 4.303833484649658 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5599 26.452 800.0 108760.0 25 0 8463.7 + 38301 TQFVSGSKY 9 110 508.7557385153525 1015.4969240975048 2 508.7559081912041 MULTI CID FTMS 0 0 0 5595 94880.15625 0.863125929512086 -1 0.0413475036621093 4 Unmodified _TQFVSGSKY_ ENSG00000171681|ENST00000261168|ATF7IP;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;nc|ENSG00000171681|Q6VMQ6-5|ATF7IP 45.739877483867886 0.0497104363764649 6 [QT]{M(Oxidation (M))|F}VSGSKY 9 0 + 72.752 0.0 0.0 7.1642 7.1642 95.567 0.0 0.0 0.0 43.30848535506722 12.983324797206286 12.983324797206286 29.823194476893136 0 1.0 0.958607314841775 0.7302046884880937 0.0 + + [QT]{M(Oxidation (M))|F}VSGSKY;[QT][DP]VV{M(Oxidation (M))|F}[NP];[NP]{[QN]|[E{I|L}]|[KN]}SV{M(Oxidation (M))|F}[NP];[DP][{I|L}A]GSV{M(Oxidation (M))|F}[NP];[KS]G[HM]V{M(Oxidation (M))|F}[NP];[DP][Q{I|L}]SV{M(Oxidation (M))|F}[NP];[QT]{M(Oxidation (M))|F}T[YK][QT];[AG]T[DP]VV{M(Oxidation (M))|F}[NP];[NP]{[ET]|[MV]}VV{M(Oxidation (M))|F}[NP];[NP]{[QN]|[E{I|L}]|[KN]}SVE[QT] 7.1642;4.2273;4.0083;3.548;3.5449;3.3746;3.1617;3.1158;3.0235;2.8012 +;-;-;-;-;-;-;-;-;- + 363 + 1 2.054 70729.8 0.9900000095367432 816 4781 5595 SUDHL4_400M_050219_2,5599 SUDHL4_400M_050219_2,5599,TQFVSGSKY True True TQFVSGSKY 26.451584 508.755908191204 470819.875 5595.0 nc|ENSG00000171681|Q6VMQ6-5|ATF7IP;;nc|ENSG00000171681|Q6VMQ6-4|ATF7IP;;ENSG00000171681|ENST00000261168|ATF7IP 6.794985135396321 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5601 26.457 143.0 266930.0 25 0 12654.0 + 26613 NVPWTRTI 8 70 493.77245786107153 985.5303627889432 2 493.7722045779228 MULTI CID FTMS 0 0 0 5600 448296.0 0.0328606406863221 11 -0.2473201751708984 1 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 21.74664581756881 0.5868176546531598 6 {M(Oxidation (M))|F}NT{I|L} 4 -1 26.682 0.0 0.0 2.7074 0.0 0.0 492.296536993653 0.0 492.296536993653 0.0 10.48455006504028 0.0 0.0 0 1.048455006504028 0.0 0.0 0.0 {M(Oxidation (M))|F}NT{I|L} 2.7074 - 127 1 2.054 35917.8 1.0 817 4782 5600 SUDHL4_400M_050219_2,5601 SUDHL4_400M_050219_2,5601,NVPWTRTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5602 26.471 800.0 39358.0 25 0 8789.9 -1 0 34 1177.8021778313398 3530.38470409422 3 1178.471118152142 MULTI CID FTMS 0 0 0 5600 58278.91015625 0.1769480916876506 4 -0.1318931579589843 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.054 32136.9 0.3300000131130218 818 4782 5600 SUDHL4_400M_050219_2,5602 SUDHL4_400M_050219_2,5602, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5603 26.485 800.0 165950.0 25 0 36110.0 + 32415 RYYTPTISR 9 113 578.8087313132827 1155.6029096933653 2 578.8092529177666 MULTI CID FTMS 0 0 0 5600 122198.359375 0.9046121519331128 -1 0.0323562622070312 3 Unmodified _RYYTPTISR_ ENSG00000126067|ENST00000373237|PSMB2 26.020703789607367 0.2001090068861241 6 RYY 3 6 29.085 0.0 0.0 2.5169 0.0 0.0 0.0 670.3443087213499 670.3443087213499 6.204074130703578 0.0 0.0 0.0 0 0.2887254899964357 0.0 0.0 0.0 + RYY 2.5169 + + 28 + 1 2.054 104566.0 0.5600000023841858 819 4782 5600 SUDHL4_400M_050219_2,5603 SUDHL4_400M_050219_2,5603,RYYTPTISR False True RYYTPTISR 26.484664 578.809252917767 686389.875 5600.0 ENSG00000126067|ENST00000373237|PSMB2 7.011020660400391 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5604 26.498 800.0 213550.0 25 0 26162.0 + 37409 TLAQQPTAV 9 133 464.7584622394838 927.5023715457676 2 464.7582885622978 MULTI CID FTMS 0 0 0 5600 105816.109375 1.0 0 0.0 4 Unmodified _TLAQQPTAV_ ENSG00000066136|ENST00000447388|NFYC;ENST00000424419.6_1_1:41157373-41232429:+|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 30.63653989081413 0.1413794767160703 6 [{I|L}T]ATH 5 5 29.252 0.0 0.0 3.1539 0.0 0.0 0.0 401.2032742159426 401.2032742159426 10.311894545657193 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [{I|L}T]ATH 3.1539 - 343 1 2.054 132293.5 0.4600000083446502 820 4782 5600 SUDHL4_400M_050219_2,5604 SUDHL4_400M_050219_2,5604,TLAQQPTAV False True TLAQQPTAV 26.49848 464.758288562298 454260.65625 5600.0 ENSG00000066136|ENST00000447388|NFYC;;nc|ENSG00000066136|Q13952|NFYC;;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC;;nc|ENSG00000066136|Q13952-5|NFYC;;ENST00000424419.6_1_1:41157373-41232429:+|nuORF 3.4448105096817017 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5605 26.511 697.0 96564.0 25 0 11182.0 19920 LIACFHGVY 9 83 511.7608574584718 1021.5071619837436 2 511.7587768435478 MULTI CID FTMS 0 0 0 5600 95343.78125 1.0 0 0.0 5 Unmodified _LIACFHGVY_ ENST00000435041.2_1_6:90037389-90037533:-|nuORF 20.871210003555333 0.2717241269066626 6 {I|L}{I|L}SAAV 6 6 64.179 0.0 0.0 6.2827 0.0 0.0 0.0 464.13974939517817 464.13974939517817 44.926113110168615 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}SAAV 6.2827 - 70 + 1 2.054 59145.3 1.0 821 4782 5600 SUDHL4_400M_050219_2,5605 SUDHL4_400M_050219_2,5605,LIACFHGVY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5607 26.515 14.0 2903700.0 25 0 408960.0 + 6816 EEAPSRPAL 9 65 485.2532415078942 968.4919300825884 2 485.2532836794853 MULTI CID FTMS 0 0 0 5606 3403185.5 0.6136766333042891 1 -0.0195941925048828 1 Unmodified _EEAPSRPAL_ nc|ENSG00000173349|Q587I9|SFT2D3 24.020572477871973 0.2255576514309169 6 EEAP 4 5 35.674 0.0 0.0 3.6835 0.0 0.0 0.0 539.2958349832791 539.2958349832791 19.9171144746592 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 + EEAP 3.6835 + + 42 + 1 2.054 37949.1 1.0 822 4783 5606 SUDHL4_400M_050219_2,5607 SUDHL4_400M_050219_2,5607,EEAPSRPAL False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 5608 26.519 158.0 281930.0 25 0 24053.0 + 13199 HGIDPTGTY 9 65 480.7247712163328 959.4349894994656 2 480.7245666384697 MULTI CID FTMS 0 0 0 5606 282338.5625 0.1483256411627026 -9 0.2869434356689453 2 Unmodified _HGIDPTGTY_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF 50.855029805455786 0.0384952370514206 6 {[HG]|PP}{I|L}DPTGTY 9 0 + 36.722 0.0 0.0 3.8275 3.8275 76.608 0.0 0.0 0.0 4.648867983026513 9.515990425663295 4.648867983026513 4.648867983026513 0 0.8182503180159344 0.0 1.0 0.0 + + {[HG]|PP}{I|L}DPTGTY;{[SA]|[TG]}Y[W{I|L}]GTY;[YT]G[W{I|L}]GTY 3.8275;3.3429;2.5063 +;-;- + 81 1 2.054 40860.7 1.0 823 4783 5606 SUDHL4_400M_050219_2,5608 SUDHL4_400M_050219_2,5608,HGIDPTGTY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5609 26.526 383.0 181290.0 25 0 16842.0 + -1 VACMMTEA 8 107 464.68202310032416 927.3494932674485 2 464.6815673708916 MULTI CID FTMS 0 0 0 5606 150638.84375 0.4253401239143684 -3 0.1326465606689453 3 Carbamidomethyl (C),Oxidation (M) _VAC(Carbamidomethyl (C))M(Oxidation (M))MTEA_ REV__ENSG00000114648|ENST00000232766|KLHL18;REV__ENST00000461084.5_1_3:47324437-47378284:+|nuORF;REV__nc|ENSG00000114648|O94889-2|KLHL18 14.581692164780916 0.6954967302934248 6 VA 2 -1 43.856 0.0 0.0 4.7292 0.0 0.0 0.0 754.220126386228 754.220126386228 25.757411238602955 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 VA 4.7292 + + 109 + 1 2.054 58047.2 1.0 824 4783 5606 SUDHL4_400M_050219_2,5609 SUDHL4_400M_050219_2,5609,VACMMTEA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5610 26.53 247.0 219860.0 25 0 28313.0 + 28987 QDSHPCEV 8 77 457.68646877712666 913.3583846210532 2 457.6873962283134 MULTI CID FTMS 0 0 0 5606 120950.9609375 0.7768605520896779 -2 0.0912990570068359 4 Unmodified _QDSHPCEV_ REV__ENST00000356284.6_2_6:169068153-169068438:+|nuORF 5.760428011301431 0.7893668129297577 6 {[VA]|[{I|L}G]}{[DA]|[EG]}T 5 -1 19.242 0.0 0.0 2.1068 0.0 0.0 0.0 453.1181862170096 453.1181862170096 3.229414910557189 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}{[DA]|[EG]}T 2.1068 - 45 1 2.054 46782.1 1.0 825 4783 5606 SUDHL4_400M_050219_2,5610 SUDHL4_400M_050219_2,5610,QDSHPCEV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5612 26.544 652.0 180270.0 25 0 57234.0 40930 VLSSPHPGPL 10 108 502.2833865327113 0 502.2825805544853 PEAK CID FTMS 0 0 0 5611 90233.734375 0.6550637696346124 -59 1.047342300415039 1 Unmodified _VLSSPHPGPL_ ENST00000318876.9_1_14:73437074-73437530:-|nuORF 15.847184025352805 0.3304572136216667 6 V 1 9 6.9897 0.0 0.0 0.69719 0.0 0.0 818.3940302902289 82.06698023013905 900.461010520368 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.69719 + + 9 + 1 2.054 95953.8 1.0 826 4784 5611 SUDHL4_400M_050219_2,5612 SUDHL4_400M_050219_2,5612,VLSSPHPGPL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5613 26.546 110.0 454870.0 25 0 65370.0 + 33814 SLDQPTQTV 9 82 494.7508558169898 987.4871587007796 2 494.7504760622978 MULTI CID FTMS 0 0 0 5611 400289.9375 0.0225034530429447 -15 0.4299678802490234 2 Unmodified _SLDQPTQTV_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 34.40172386719151 0.1061884637610825 6 {[TV]|[{I|L}S]}QD 4 6 36.916 0.0 0.0 3.7384 0.0 0.0 0.0 541.2623106385328 541.2623106385328 8.359542653121878 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.2614393726401688 0.2887254899964357 {[TV]|[{I|L}S]}QD 3.7384 - 225 1 2.054 42874.7 1.0 827 4784 5611 SUDHL4_400M_050219_2,5613 SUDHL4_400M_050219_2,5613,SLDQPTQTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5614 26.551 272.0 212590.0 25 0 53203.0 -1 RMIDIQTRM 9 78 399.2012051449492 1194.5817860350476 3 399.2000915408134 MULTI CID FTMS 0 0 0 5611 69601.8828125 1.0 0 0.0 3 2 Oxidation (M) _RM(Oxidation (M))IDIQTRM(Oxidation (M))_ ENSG00000071462|ENST00000265758|BUD23;ENST00000463307.5_1_7:73097949-73107126:+|nuORF;nc|ENSG00000071462|O43709-2|BUD23;nc|ENSG00000071462|O43709-3|BUD23 10.898955630103616 0.5416613042237204 6 [R{M(Oxidation (M))|F}]{I|L}D{I|L} 5 -1 14.425 0.0 0.0 1.2075 0.0 0.0 0.0 547.2316633145975 547.2316633145975 8.407927847995502 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [R{M(Oxidation (M))|F}]{I|L}D{I|L} 1.2075 + + 23 1 2.054 50911.7 1.0 828 4784 5611 SUDHL4_400M_050219_2,5614 SUDHL4_400M_050219_2,5614,RMIDIQTRM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5615 26.565 800.0 185640.0 25 0 24761.0 + 34295 SLREDQQSF 9 160 555.2648837185476 1108.515214503895 2 555.2649413943291 MULTI CID FTMS 0 0 0 5611 103341.6953125 1.0 0 0.0 4 Unmodified _SLREDQQSF_ chr7:74220734-74223724|44|16.84|0.83|4.35|+|ENST00000488266|LAT2,LAT2;ENSG00000086730|ENST00000460943|LAT2;nc|ENSG00000086730|Q9GZY6-2|LAT2 43.77239144664712 0.0547478964384323 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HT]KQQS{M(Oxidation (M))|F} 9 4 + 47.285 0.0 0.0 4.2656 4.2656 77.632 0.0 0.0 0.0 2.7762946850786463 30.74227272431738 2.7762946850786463 4.126047707142995 0 0.9247425010840048 1.0457574905606752 0.2302046884880938 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HT]KQQS{M(Oxidation (M))|F};[DP]{M(Oxidation (M))|F}{I|L}KQQS{M(Oxidation (M))|F};[AG]D[QT]KQQS{M(Oxidation (M))|F};[AG]S{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KQQS{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E][VP]KQQS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HT]K[AG]QS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[HT]KQ[AG]S{M(Oxidation (M))|F};{[QS]|[NT]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KQQS{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}[QT]KQQS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[HG]|PP}[TA]QQS{M(Oxidation (M))|F} 4.2656;3.8934;3.7185;3.6757;3.4993;3.4349;3.4349;3.3437;3.3405;3.126 -;-;-;-;-;-;-;-;-;- 1099 1 2.054 118796.3 0.5199999809265137 829 4784 5611 SUDHL4_400M_050219_2,5615 SUDHL4_400M_050219_2,5615,SLREDQQSF True True SLREDQQSF 26.565128 555.264941394329 516197.71875 5611.0 nc|ENSG00000086730|Q9GZY6-2|LAT2;;chr7:74220734-74223724|44|16.84|0.83|4.35|+|ENST00000488266|LAT2,LAT2;;ENSG00000086730|ENST00000460943|LAT2 6.3691887855529785 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5617 26.57 122.0 371590.0 25 0 53378.0 + 31345 RMSDKVDQ 8 59 489.7351835225543 977.4558141119086 2 489.7350646853447 MULTI CID FTMS 0 0 0 5616 346838.0625 0.2968827204415089 4 -0.0549449920654296 1 Unmodified _RMSDKVDQ_ REV__ENSG00000141748|ENST00000269586|ARL5C 34.40172386719151 0.3279500639400574 6 {[CA]|SS}S{I|L}D[QT]{I|L}Q 9 -1 + 54.715 0.0 0.0 5.5977 5.5977 79.583 0.0 0.0 0.0 6.478174818886373 13.015384402724592 6.478174818886373 2.003187623076954 0 0.9247425010840048 0.0 0.6307196863200843 0.6307196863200843 {[CA]|SS}S{I|L}D[QT]{I|L}Q;{[CA]|SS}{I|L}SD[QT]{I|L}Q;{[CA]|SS}D{[TV]|[{I|L}S]}[QT]{I|L}Q;{[CA]|SS}D{[CP]|[EA]}[KT]{I|L}Q;{[CA]|SS}S{[QV]|[N{I|L}]|[RA]|[KV]}DD{I|L}Q;{[CA]|SS}S[{M(Oxidation (M))|F}V][NP]{I|L}Q;{[CA]|SS}[W{M(Oxidation (M))|F}][NP]{I|L}Q;{[CA]|SS}{I|L}{[DS]|[MA]|[CV]|TT}ND{I|L}Q 5.5977;5.3928;3.9626;3.3767;3.1066;2.9107;2.8639;2.8207 -;-;-;-;-;-;-;- 166 + 1 2.054 39023.3 1.0 830 4785 5616 SUDHL4_400M_050219_2,5617 SUDHL4_400M_050219_2,5617,RMSDKVDQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5618 26.577 389.0 151730.0 25 0 20776.0 + 28111 AQPPVGAAY 9 99 437.226075426669 1308.656396880207 3 437.2256957888603 MULTI CID FTMS 0 0 0 5616 92705.0703125 0.5738496504842462 -2 0.0545730590820312 2 Unmodified _PPMRVYEVATF_ ENSG00000136861|ENST00000349780|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2 3.2813086475875832 0.8596665074481906 6 {[HG]|PP}VGAAGA 8 7 22.951 0.0 0.0 1.7538 0.0 0.0 0.0 685.305053456632 685.305053456632 1.9818483141856191 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}VGAAGA 1.7538 - 132 1 2.054 51850.6 1.0 831 4785 5616 SUDHL4_400M_050219_2,5618 SUDHL4_400M_050219_2,5618,PPMRVYEVATF False False AQPPVGAAY 26.577123 437.22569578886 1572218.875 5616.0 ENSG00000136861|ENST00000349780|CDK5RAP2;;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2 5.374581972757976 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5619 26.583 348.0 124030.0 25 0 10571.0 + -1 IVDPQNQTM 9 74 531.2508437000944 1060.487134466989 2 531.2496215701103 MULTI CID FTMS 0 0 0 5616 93134.796875 0.9821903622492332 -1 0.0349788665771484 3 Oxidation (M) _IVDPQNQTM(Oxidation (M))_ ENST00000511309.5_1_5:176730986-176733129:+|nuORF;ENSG00000169230|ENST00000303204|PRELID1;nc|ENSG00000169230|Q9Y255-2|PRELID1 12.531546534597751 0.4974689918368763 6 [{I|L}V]D 3 -1 25.686 0.0 0.0 2.4221 0.0 0.0 0.0 730.2851745883355 730.2851745883355 7.727562184969372 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]D 2.4221 + + 46 1 2.054 41119.9 1.0 832 4785 5616 SUDHL4_400M_050219_2,5619 SUDHL4_400M_050219_2,5619,IVDPQNQTM False False IVDPQNQTM 26.583425 531.24962157011 590666.75 5616.0 ENST00000511309.5_1_5:176730986-176733129:+|nuORF;;ENSG00000169230|ENST00000303204|PRELID1;;nc|ENSG00000169230|Q9Y255-2|PRELID1 4.123205184936523 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5622 26.6 473.0 209550.0 25 0 23909.0 + 15667 IQNDRQLQY 9 101 589.3011431838923 1176.5877334345846 2 589.3008911013603 MULTI CID FTMS 0 0 0 5621 76358.7890625 0.7283291357586418 1 -0.0163154602050781 1 Unmodified _IQNDRQLQY_ ENSG00000100109|ENST00000407690|TFIP11 57.72198328787511 0.0273433238377839 6 [Q{I|L}]N{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}ST{I|L}Q 10 6 + 40.724 0.0 0.0 3.4612 3.4612 79.204 0.0 0.0 0.0 7.269987279362624 15.895720547286595 7.269987279362624 9.164539485499247 0 0.4247425010840047 0.0 0.0 1.528659694992122 [Q{I|L}]N{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}ST{I|L}Q;[Q{I|L}]GG{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}ST{I|L}Q;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}DT{I|L}Q;{[QN]|[E{I|L}]|[KN]}T[WP]Q{I|L}QY;[Q{I|L}]N{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}R{[WS]|[C(Carbamidomethyl (C)){I|L}]};[Q{I|L}]N[EC][KT]T{I|L}Q;[Q{I|L}][YE][WP]T{I|L}Q;[Q{I|L}][WC(Carbamidomethyl (C))][KT]T{I|L}Q;{[QN]|[E{I|L}]|[KN]}T[WP]QQ{I|L}Y;[Q{I|L}]N{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}R 3.4612;2.6823;2.5047;2.3216;2.1102;2.0171;1.9861;1.8675;1.7687;1.7047 -;-;-;-;-;-;-;-;-;- 964 + 1 2.054 77723.9 1.0 833 4787 5621 SUDHL4_400M_050219_2,5622 SUDHL4_400M_050219_2,5622,IQNDRQLQY True True IQNDRQLQY 26.599527 589.30089110136 463631.875 5621.0 ENSG00000100109|ENST00000407690|TFIP11 6.706702868143718 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5623 26.604 212.0 250240.0 25 0 25456.0 + 39314 VAEENTRVL 9 72 515.7798708380559 1029.5451887429117 2 515.7801391482353 MULTI CID FTMS 0 0 0 5621 163794.96875 0.5915457462665259 -4 0.0767974853515625 2 Unmodified _VAEENTRVL_ ENSG00000156256|ENST00000399976|USP16;ENST00000485067.1_1_21:30426080-30426505:+|nuORF;nc|ENSG00000156256|Q9Y5T5-2|USP16;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-4|USP16 23.78978130925829 0.2284941198415988 6 VAEENT 6 3 68.633 0.0 0.0 6.6663 0.0 0.0 0.0 383.2409762018188 383.2409762018188 61.64320017660792 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + VAEENT 6.6663 + + 53 + 1 2.054 46267.3 1.0 834 4787 5621 SUDHL4_400M_050219_2,5623 SUDHL4_400M_050219_2,5623,VAEENTRVL False True VAEENTRVL 26.60356 515.780139148235 1512417.375 5621.0 ENSG00000156256|ENST00000399976|USP16;;nc|ENSG00000156256|Q9Y5T5-4|USP16;;nc|ENSG00000156256|Q9Y5T5-2|USP16;;nc|ENSG00000156256|Q9Y5T5-3|USP16;;ENST00000485067.1_1_21:30426080-30426505:+|nuORF 5.207996050516765 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5625 26.62 800.0 119980.0 25 0 6628.8 + -1 GQNKKVMIY 9 129 548.7946119552291 1095.5746709772582 2 548.7939941287041 MULTI CID FTMS 0 0 0 5624 71320.8359375 0.3380018767130449 -9 0.2572841644287109 1 Oxidation (M) _GQNKKVM(Oxidation (M))IY_ ENSG00000111642|ENST00000544040|CHD4;ENSG00000116254|ENST00000262450|CHD5;nc|ENSG00000111642|Q14839-2|CHD4 39.957323273325 0.0756908302845263 6 {M(Oxidation (M))|F}{I|L}Y 3 -1 22.03 0.0 0.0 2.0108 0.0 0.0 654.3793107251082 0.0 654.3793107251082 0.0 2.789308460428341 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 {M(Oxidation (M))|F}{I|L}Y 2.0108 + + 255 + 1 2.054 80283.6 0.5 835 4788 5624 SUDHL4_400M_050219_2,5625 SUDHL4_400M_050219_2,5625,GQNKKVMIY False False GQNKKVMIY 26.619967 548.793994128704 1138178.875 5624.0 ENSG00000111642|ENST00000544040|CHD4;;ENSG00000116254|ENST00000262450|CHD5;;nc|ENSG00000111642|Q14839-2|CHD4 5.786841710408528 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5628 26.636 536.0 151350.0 25 0 12717.0 + -1 CRNIMCLEKMY 11 93 775.3363008929401 1548.6580488526802 2 775.3361083865166 MULTI CID FTMS 0 0 0 5627 148166.609375 0.0534020565956896 -15 0.3962440490722656 1 2 Carbamidomethyl (C),2 Oxidation (M) _C(Carbamidomethyl (C))RNIM(Oxidation (M))C(Carbamidomethyl (C))LEKM(Oxidation (M))Y_ REV__ENST00000370766.7_1_X:134425468-134426389:-|nuORF 5.296884461304476 0.8501568894076437 6 [QA]HDAEGAQNA{M(Oxidation (M))|F}YQ 14 -1 + 117.95 0.0 0.0 7.6161 7.6161 64.786 0.0 0.0 0.0 5.184013239538743 93.5057918858201 5.184013239538743 0.0 0 1.325257498915995 0.0 1.385151878060192 1.274227503252014 [QA]HDAEGAQNA{M(Oxidation (M))|F}YQ;[QA]HDEAGAQNA{M(Oxidation (M))|F}YQ;[QA]HDEAGANQA{M(Oxidation (M))|F}YQ;[QA]HDAEGANQA{M(Oxidation (M))|F}YQ;[QA]HDEAQQNA{M(Oxidation (M))|F}YQ;[QA]HDAEQQNA{M(Oxidation (M))|F}YQ;[QA]HDEAQNQA{M(Oxidation (M))|F}YQ;[QA]HDAEQNQA{M(Oxidation (M))|F}YQ;[QA]HDAEGA[AG]NA{M(Oxidation (M))|F}YQ;[QA]HDEAGA[AG]NA{M(Oxidation (M))|F}YQ 7.6161;7.6161;7.4732;7.4732;7.38;7.38;7.237;7.237;7.0317;7.0317 -;-;-;-;-;-;-;-;-;- 11024 1 2.054 61344.9 1.0 836 4790 5627 SUDHL4_400M_050219_2,5628 SUDHL4_400M_050219_2,5628,CRNIMCLEKMY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5629 26.65 800.0 138030.0 25 0 17412.0 22920 LSDQYKQE 8 117 505.7420097028248 1009.4694664724497 2 505.7418090701103 MULTI CID FTMS 0 0 0 5627 93733.0703125 0.2496035787302003 -9 0.2046432495117187 2 Unmodified _LSDQYKQE_ ENSG00000117724|ENST00000366955|CENPF 29.081581746732265 0.4323690340403521 6 {[TV]|[{I|L}S]}DQ 4 4 51.44 0.0 0.0 5.0958 0.0 0.0 0.0 563.2444047930364 563.2444047930364 32.996812376923046 0.0 0.0 0.0 0 1.0994850021680094 2.0 0.4247425010840047 0.0 + {[TV]|[{I|L}S]}DQ 5.0958 + + 764 + 1 2.054 86701.6 0.5400000214576721 837 4790 5627 SUDHL4_400M_050219_2,5629 SUDHL4_400M_050219_2,5629,LSDQYKQE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5631 26.666 800.0 94619.0 25 0 8164.6 + 31197 RLQEDPPAGV 10 115 541.2854510866874 1080.5563492401748 2 541.2852050662041 MULTI CID FTMS 0 0 0 5630 68433.2109375 0.5071584458811231 3 -0.0658893585205078 1 Unmodified _RLQEDPPAGV_ ENSG00000077721|ENST00000371558|UBE2A;nc|ENSG00000077721|P49459-2|UBE2A 41.95555342248728 0.1369168616057562 6 [VG]SVPSD[HK]GV 11 9 + 51.098 0.0 0.0 4.7289 4.7289 75.488 0.0 0.0 0.0 2.9728216893236947 1.989700043360188 1.989700043360188 1.5420458332812217 0 1.0 1.6989700043360187 0.7134679910804405 0.0 [VG]SVPSD[HK]GV;[VG][RD]VDP[PA]GV;[VG]SVPSDP[PA]R;[PS]{NN|[MP]|[D{I|L}]|[EV]}QTP[PA]R;[VG]SVA{NN|[MP]|[D{I|L}]|[EV]}P[PA]GV;[VG]SVSPD[HK]GV;{[TV]|[{I|L}S]}[DP]QTP[PA]R;[VG]SVA{NN|[MP]|[D{I|L}]|[EV]}[HQ]GV;[VG]SVSPDP[PA]R;[PS]{NN|[MP]|[D{I|L}]|[EV]}QT[HK]GV 4.7289;4.5862;4.5448;4.4538;4.3644;4.2662;4.2371;4.2153;4.082;3.7821 -;-;-;-;-;-;-;-;-;- 742 1 2.054 67784.4 0.4900000095367431 838 4791 5630 SUDHL4_400M_050219_2,5631 SUDHL4_400M_050219_2,5631,RLQEDPPAGV False True RLQEDPPAGV 26.666019 541.285205066204 2567584.75 5630.0 nc|ENSG00000077721|P49459-2|UBE2A;;ENSG00000077721|ENST00000371558|UBE2A 7.955833911895752 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5632 26.667 52.0 878430.0 25 0 53507.0 + -1 APMSNPHTV 9 81 485.2265307405547 968.4385085479096 2 485.2266418337822 MULTI CID FTMS 0 0 0 5630 600584.3125 0.4053145867628532 -18 0.4687862396240234 2 Oxidation (M) _APM(Oxidation (M))SNPHTV_ REV__ENSG00000068697|ENST00000175091|LAPTM4A 25.399314129420983 0.2080152500878129 6 SPA{M(Oxidation (M))|F}PERD 8 -1 55.841 0.0 0.0 5.7661 0.0 0.0 0.0 66.03576074771718 66.03576074771718 43.07665413011413 0.0 0.0 0.0 0 0.8452266673433143 2.0 0.3054621874040891 0.0 SPA{M(Oxidation (M))|F}PERD 5.7661 - 371 + 1 2.054 41352.3 1.0 839 4791 5630 SUDHL4_400M_050219_2,5632 SUDHL4_400M_050219_2,5632,APMSNPHTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5633 26.681 800.0 87672.0 25 0 5049.7 + + 33477 RLAEQVSSY 9 105 526.7726677402683 1051.5307825473365 2 526.7729980349541 MULTI CID FTMS 0 0 0 5630 113391.25 0.9388063228134436 -2 0.0296363830566406 3 Unmodified _SIHFLVSSY_ ENSG00000133114|ENST00000379151|GPALPP1;nc|ENSG00000133114|Q8IXQ4-3|GPALPP1;nc|ENSG00000133114|Q8IXQ4-2|GPALPP1 54.773552608820026 0.0299037012502309 6 EGAVSSY 7 -1 70.279 0.0 0.0 6.6835 0.0 0.0 340.2228871076188 0.0 340.2228871076188 0.0 56.88838781880818 0.0 0.0 0 1.325257498915995 0.0 0.805462187404089 0.0 EGAVSSY 6.6835 - 531 1 2.054 62044.7 0.5199999809265137 840 4791 5630 SUDHL4_400M_050219_2,5633 SUDHL4_400M_050219_2,5633,SIHFLVSSY False False RLAEQVSSY 26.681194 526.772998034954 808472.4375 5630.0 ENSG00000133114|ENST00000379151|GPALPP1;;nc|ENSG00000133114|Q8IXQ4-3|GPALPP1;;nc|ENSG00000133114|Q8IXQ4-2|GPALPP1 7.253242492675781 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5634 26.695 800.0 136440.0 25 0 12344.0 33227 SFMDVSNPFYQ 11 99 675.7884881995756 1349.562423465951 2 675.7892944216728 MULTI CID FTMS 0 0 0 5630 96951.671875 0.5579813846346979 -6 0.0845813751220703 4 Oxidation (M) _SFM(Oxidation (M))DVSNPFYQ_ ENSG00000163939|ENST00000707071|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-6|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1 41.95555342248728 0.1822715950200113 6 [HD]EAQQNA{M(Oxidation (M))|F}YQ 11 7 + 101.34 0.0 0.0 7.5093 7.5093 91.044 0.0 0.0 0.0 4.981979378655879 90.14442917016676 4.981979378655879 9.128498242811006 0 1.0 0.0 1.2638793319624575 1.274227503252014 [HD]EAQQNA{M(Oxidation (M))|F}YQ;[HD]EAQ[AG]NA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QNA{M(Oxidation (M))|F}YQ;[HD]EAQQGGA{M(Oxidation (M))|F}YQ;[HD]EAQQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[SG];[HD]EAQ[AG]GGA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QGGA{M(Oxidation (M))|F}YQ;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QNA{M(Oxidation (M))|F}YQ;[HD]EA[AG]QNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}[SG] 7.5093;6.8329;6.8329;6.8329;6.2393;6.1587;6.1587;6.1587;5.7272;5.5652 -;-;-;-;-;-;-;-;-;- 700 1 2.054 87041.5 0.4799999892711639 841 4791 5630 SUDHL4_400M_050219_2,5634 SUDHL4_400M_050219_2,5634,SFMDVSNPFYQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5637 26.707 325.0 209150.0 25 0 48052.0 + 2165 AQAESLRY 8 77 469.2406239078688 936.4666948825376 2 469.2416869997978 MULTI CID FTMS 0 0 0 5636 130028.015625 1.0 0 0.0 1 Unmodified _AQAESLRY_ ENSG00000149273|ENST00000531188|RPS3;ENST00000433853.1_1_3:183867695-183868220:+|nuORF;ENST00000487417.1_1_12:62415587-62415818:-|nuORF;nc|ENSG00000149273|P23396-2|RPS3 24.020572477871973 0.5389365498350341 6 [QA]AVV 5 5 41.146 0.0 0.0 4.3938 0.0 0.0 0.0 465.1752879824002 465.1752879824002 29.363651182115813 0.0 0.0 0.0 0 1.424742501084005 0.7958800173440752 0.0 0.4247425010840047 [QA]AVV 4.3938 - 68 1 2.054 59254.6 1.0 842 4793 5636 SUDHL4_400M_050219_2,5637 SUDHL4_400M_050219_2,5637,AQAESLRY False True AQAESLRY 26.707297 469.241686999798 719065.75 5636.0 ENST00000433853.1_1_3:183867695-183868220:+|nuORF;;nc|ENSG00000149273|P23396-2|RPS3;;ENSG00000149273|ENST00000531188|RPS3;;ENST00000487417.1_1_12:62415587-62415818:-|nuORF 2.656586587429046 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5638 26.716 471.0 122210.0 25 0 18037.0 + -1 GAPYRHVWT 9 58 564.7854128633662 1127.5562727935323 2 564.7857543826103 MULTI CID FTMS 0 0 0 5636 142191.265625 0.7751189818715545 -5 0.0952644348144531 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))GAPYRHVWT_ REV__ENST00000264644.10_1_17:38333422-38337880:+|nuORF 15.847184025352805 0.4077185912009129 6 PQD 3 -1 29.253 0.0 0.0 2.5943 0.0 0.0 170.06708713270092 614.3281964362808 784.3952835689818 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.805462187404089 PQD 2.5943 - 27 + 1 2.054 52815.4 1.0 843 4793 5636 SUDHL4_400M_050219_2,5638 SUDHL4_400M_050219_2,5638,GAPYRHVWT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5640 26.73 711.0 133460.0 25 0 10654.0 + 42010 VQQPGQTNF 9 125 509.7514344971159 1017.4883160610318 2 509.7517578005791 MULTI CID FTMS 0 0 0 5639 126368.9140625 0.3220706901158801 -5 0.0955257415771484 1 Unmodified _VQQPGQTNF_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 61.357469665136826 0.0253304979873734 6 {[QV]|[N{I|L}]|[RA]|[KV]}Q 3 6 30.519 0.0 0.0 2.9995 0.0 0.0 0.0 659.2791964858458 659.2791964858458 0.6952177879056656 0.0 0.0 0.0 0 0.5 0.744727494896694 0.0 0.7614393726401688 + {[QV]|[N{I|L}]|[RA]|[KV]}Q 2.9995 + + 479 1 2.054 77396.6 1.0 844 4794 5639 SUDHL4_400M_050219_2,5640 SUDHL4_400M_050219_2,5640,VQQPGQTNF True True VQQPGQTNF 26.730389 509.751757800579 2047374.875 5639.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 7.137849648793538 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5641 26.741 610.0 143190.0 25 0 6663.8 + 15775 ISEAAASTSTI 11 132 525.7695052265893 1049.5244575199786 2 525.7704955935478 MULTI CID FTMS 0 0 0 5639 131579.234375 0.4147622291274798 -7 0.1282463073730468 2 Unmodified _ISEAAASTSTI_ REV__ENSG00000124214|ENST00000371856|STAU1 38.17557092003332 0.2405003631267018 6 {[NV]|[RG]}RNYGNT{I|L} 9 -1 + 63.771 0.0 0.0 6.0762 6.0762 88.509 0.0 0.0 0.0 2.632192780232785 45.15031251017078 2.632192780232785 9.208187539523747 0 0.8494850021680094 0.0 0.3494850021680094 1.2218487496163564 {[NV]|[RG]}RNYGNT{I|L};{[NV]|[RG]}RGGYGNT{I|L};{[NV]|[RG]}RNYGGGT{I|L};{[TV]|[{I|L}S]}[WP]YGNT{I|L};{[NV]|[RG]}RGGYGGGT{I|L};[NG]{[NV]|[RG]}VYGNT{I|L};{[TV]|[{I|L}S]}E[VP][YE]T{I|L};[NG]{[NV]|[RG]}VYGGGT{I|L};[{I|L}T]D[VP][YE]T{I|L};{[TV]|[{I|L}S]}[WP]YGGGT{I|L} 6.0762;5.1988;5.1988;4.5802;4.3256;4.3226;3.9749;3.4494;3.4279;3.3698 -;-;-;-;-;-;-;-;-;- 1087 1 2.054 71559.6 1.0 845 4794 5639 SUDHL4_400M_050219_2,5641 SUDHL4_400M_050219_2,5641,ISEAAASTSTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5642 26.755 800.0 81942.0 25 0 7595.8 + 3488 KMMDSGQIDFYQ 12 75 739.8179072044649 1477.6212614757296 2 739.8182861208916 MULTI CID FTMS 0 0 0 5639 96255.5234375 0.812196741524452 -10 0.1854496002197265 3 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKC(Carbamidomethyl (C))FYQ_ nc|ENSG00000162419|Q9Y692|GMEB1;ENSG00000162419|ENST00000373816|GMEB1 41.8396318013385 0.1381409678234242 6 [YE][C(Carbamidomethyl (C))K]QQNA{M(Oxidation (M))|F}YQ 11 7 + 79.429 0.0 0.0 5.3755 5.3755 85.112 0.0 0.0 0.0 2.3232637348531 45.40076910880987 2.3232637348531 9.128498242810991 0 1.274227503252014 0.0 1.066901560044258 2.579689690656103 [YE][C(Carbamidomethyl (C))K]QQNA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K][AG]QNA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]Q[AG]NA{M(Oxidation (M))|F}YQ;[YE][C(Carbamidomethyl (C))K]QQGGA{M(Oxidation (M))|F}YQ;YY{M(Oxidation (M))|F}ANEYA{M(Oxidation (M))|F}YQ;YY{M(Oxidation (M))|F}AGGEYA{M(Oxidation (M))|F}YQ;YY{M(Oxidation (M))|F}[WQ]YA{M(Oxidation (M))|F}YQ 5.3755;4.7577;4.7577;4.7577;3.9183;3.3006;2.8155 -;-;-;-;-;-;- 556 1 2.054 53545.0 0.4399999976158142 846 4794 5639 SUDHL4_400M_050219_2,5642 SUDHL4_400M_050219_2,5642,CKECRKCFYQ False False KMMDSGQIDFYQ 26.754895 739.818286120892 639532.3125 5639.0 nc|ENSG00000162419|Q9Y692|GMEB1;;ENSG00000162419|ENST00000373816|GMEB1 -0.3794896602630615 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5645 26.775 800.0 72484.0 25 0 20330.0 -1 0 35 1178.4807721430088 3532.420487029227 3 1178.816332995892 MULTI CID FTMS 0 0 0 5644 148259.296875 0.344853196172166 -17 0.4121284484863281 1 6 G 1 -1 6.9897 0.0 0.0 0.19787 0.0 0.0 2147.7525925973896 1324.632894332076 3472.385486929465 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19787 - 6 + 1 1.927 58538.8 0.6100000143051147 847 4796 5644 SUDHL4_400M_050219_2,5645 SUDHL4_400M_050219_2,5645, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5647 26.779 39.0 961160.0 25 0 94089.0 + 13200 HGIDPTGTY 9 56 480.7247712163328 959.4349894994656 2 480.7247802615166 MULTI CID FTMS 0 0 0 5646 1420164.375 0.7460787134888947 5 -0.034830093383789 1 Unmodified _HGIDPTGTY_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000604929.1_1_9:140135770-140136775:+|nuORF 50.855029805455786 0.0384952370514206 6 {[HG]|PP}{I|L}DPTGTY 9 0 + 47.642 0.0 0.0 4.9656 4.9656 81.83 0.0 0.0 0.0 4.762036441594191 30.652209333178604 4.762036441594191 6.7609125905568135 0 0.7742275032520141 0.0 0.8807196863200843 0.0 + + {[HG]|PP}{I|L}DPTGTY;{[HG]|PP}{I|L}DPGTTY;[TP][HS]PTGTY;{[SA]|[TG]}Y[W{I|L}]GTY;[YT]G[W{I|L}]GTY;[TP][HS]PGTTY;[QA][PS]G[TP]G[{M(Oxidation (M))|F}V] 4.9656;4.2609;3.1948;3.0209;2.5668;2.4901;0.77059 +;-;-;-;-;-;- + 184 1 1.927 37040.4 1.0 848 4797 5646 SUDHL4_400M_050219_2,5647 SUDHL4_400M_050219_2,5647,HGIDPTGTY True True HGIDPTGTY 26.779224 480.724780261517 23748288.0 5646.0 ENSG00000196230|ENST00000327892|TUBB;;ENSG00000104833|ENST00000264071|TUBB4A;;ENST00000604929.1_1_9:140135770-140136775:+|nuORF;;ENSG00000188229|ENST00000340384|TUBB4B;;ENST00000518096.1_1_8:30209523-30210210:+|nuORF 8.934678713480631 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5648 26.782 101.0 1293600.0 25 0 941800.0 -1 0 55 437.2358718172526 436.2285953506526 1 437.2368347048759 MULTI CID FTMS 0 0 0 5646 560413.6875 0.0732088040058503 -13 0.2443656921386718 2 6 AY 2 -1 18.583 0.0 0.0 4.26 0.0 0.0 184.1162734285807 0.0 184.1162734285807 0.0 8.90578380261684 0.0 0.0 0 0.0 0.0 0.0 0.0 AY 4.26 - 6 + 1 1.927 106808.7 1.0 849 4797 5646 SUDHL4_400M_050219_2,5648 SUDHL4_400M_050219_2,5648, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5651 26.802 800.0 88433.0 25 0 14196.0 + 24460 MHYTGRTELQ 10 80 618.2950471964887 0 618.2956420779228 PEAK CID FTMS 0 0 0 5650 50050.078125 0.3220879900542215 -6 0.0863666534423828 1 Unmodified _MHYTGRTELQ_ REV__ENST00000605870.5_1_14:35742653-35742716:+|nuORF 12.240655878213236 0.3578162629684178 6 {I|L} 1 -1 13.227 0.0 0.0 1.0714 0.0 0.0 146.06731499668973 972.3943940431212 1118.4617090398108 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 {I|L} 1.0714 + + 7 + 1 1.927 59131.3 0.7300000190734863 850 4799 5650 SUDHL4_400M_050219_2,5651 SUDHL4_400M_050219_2,5651,MHYTGRTELQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5653 26.806 3.6 8954600.0 25 0 1301900.0 + 33815 SLDQPTQTV 9 61 494.7508558169898 987.4871587007796 2 494.7510558962822 MULTI CID FTMS 0 0 0 5652 16500688.0 0.9276337544315152 1 -0.0042953491210937 1 Unmodified _SLDQPTQTV_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 24.020572477871973 0.2255576514309169 6 {[TV]|[{I|L}S]}DQ 4 5 32.224 0.0 0.0 3.2632 0.0 0.0 0.0 541.2615171815015 541.2615171815015 8.539171939081172 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {[TV]|[{I|L}S]}DQ 3.2632 + + 144 1 1.927 30031.3 1.0 851 4800 5652 SUDHL4_400M_050219_2,5653 SUDHL4_400M_050219_2,5653,SLDQPTQTV False True SLDQPTQTV 26.805903 494.751055896282 376523232.0 5652.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 6.579981009165446 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5659 26.84 800.0 125770.0 25 0 36564.0 -1 LIWRRCIY 8 82 611.3328124880791 0 611.3328124880791 PEAK CID FTMS 0 0 0 -1 0 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))LIWRRC(Carbamidomethyl (C))IY_ ENST00000374270.7_1_9:114840952-114842376:-|nuORF 9.347437153973935 0.5488964601725408 6 V 1 -1 9.2917 0.0 0.0 0.76121 0.0 0.0 511.287743040808 607.2691744440061 1118.5569174848142 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 V 0.76121 - 27 + 1 1.927 78004.5 0.8299999833106995 852 4805 5658 SUDHL4_400M_050219_2,5659 SUDHL4_400M_050219_2,5659,LIWRRCIY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5661 26.858 800.0 118920.0 25 0 10844.0 -1 0 124 422.12305319993584 842.2315534666717 2 422.1237060427666 MULTI CID FTMS 0 0 0 5660 158847.84375 0.9239279540167292 -3 0.0260009765625 1 6 P 1 -1 10.837 0.0 0.0 1.2868 0.0 0.0 727.1677544938186 0.0 727.1677544938186 0.0 1.0835455498197266 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.2868 - 20 + 1 1.837 76985.5 0.7599999904632568 853 4806 5660 SUDHL4_400M_050219_2,5661 SUDHL4_400M_050219_2,5661, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5663 26.874 800.0 61288.0 25 0 6991.8 36305 SYKPLVDLY 9 78 549.2961913943291 0 549.2961913943291 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _SYKPLVDLY_ ENSG00000077009|ENST00000168977|NMRK2;nc|ENSG00000077009|Q9NPI5-3|NMRK2 5.230669730166228 0.3444685223463734 6 S 1 8 2.4743 0.0 0.0 0.22563 0.0 0.0 566.3083691051544 440.2273653619751 1006.5357344671296 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + S 0.22563 + + 2 + 1 1.837 45219.6 0.6200000047683716 854 4807 5662 SUDHL4_400M_050219_2,5663 SUDHL4_400M_050219_2,5663,SYKPLVDLY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5665 26.892 800.0 93514.0 25 0 10032.0 + -1 NAECHTPEKL 10 108 599.7804399617214 1197.5463269902427 2 599.7808105349541 MULTI CID FTMS 0 0 0 5664 100914.4296875 0.4786421937140209 -6 0.0640888214111328 1 Carbamidomethyl (C) _NAEC(Carbamidomethyl (C))HTPEKL_ REV__ENSG00000163104|ENST00000354268|SMARCAD1;REV__nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;REV__nc|ENSG00000163104|Q9H4L7-3|SMARCAD1 7.608950283845883 0.6914406445242895 6 N[EP][K{I|L}] 5 -1 23.028 0.0 0.0 1.9229 0.0 0.0 598.2320092185615 0.0 598.2320092185615 0.0 9.532796692927263 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.3494850021680094 N[EP][K{I|L}] 1.9229 - 87 + 1 1.837 61681.3 0.6700000166893005 855 4808 5664 SUDHL4_400M_050219_2,5665 SUDHL4_400M_050219_2,5665,NAECHTPEKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5667 26.896 23.0 1563700.0 25 0 168520.0 -1 RAWDMRYYMNQ 11 49 775.3363008929401 1548.6580488526802 2 775.3369628787041 MULTI CID FTMS 0 0 0 5666 2596660.25 0.9358856102276092 4 -0.0441799163818359 1 Oxidation (M) _RAWDM(Oxidation (M))RYYMNQ_ ENSG00000172009|ENST00000307741|THOP1;ENST00000589087.5_1_19:2806818-2807876:+|nuORF;ENST00000591149.5_1_19:2807001-2808381:+|nuORF 1.3295316138638542 0.8688751186870782 6 [QA]HDEAQQNA{M(Oxidation (M))|F}[YQ] 13 -1 + 72.198 0.0 0.0 4.662 4.662 77.409 0.0 0.0 0.0 5.127974464358772 50.96134155914631 5.127974464358772 3.0102999566398125 0 0.5 0.0 0.0 0.8494850021680094 [QA]HDEAQQNA{M(Oxidation (M))|F}[YQ];[QA]HDAEQQNA{M(Oxidation (M))|F}[YQ];[QA]HDEAQNQA{M(Oxidation (M))|F}[YQ];[QA]HDAEQNQA{M(Oxidation (M))|F}[YQ];[QA]HDEA[AG]QNA{M(Oxidation (M))|F}[YQ];[QA]HDEAQQGGA{M(Oxidation (M))|F}[YQ];[QA]HDEAQ[AG]NA{M(Oxidation (M))|F}[YQ];[QA]HDAEQQGGA{M(Oxidation (M))|F}[YQ];[QA]HDAE[AG]QNA{M(Oxidation (M))|F}[YQ];[QA]HDAEQ[AG]NA{M(Oxidation (M))|F}[YQ] 4.662;4.4676;4.3539;4.1595;4.0762;4.0762;4.0762;3.8818;3.8818;3.8818 -;-;-;-;-;-;-;-;-;- 1108 1 1.837 33392.4 1.0 856 4809 5666 SUDHL4_400M_050219_2,5667 SUDHL4_400M_050219_2,5667,RAWDMRYYMNQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5668 26.91 800.0 156560.0 25 0 24270.0 + 22911 LSDLEDRY 8 134 505.7420097028248 1009.4694664724497 2 505.7404968142509 MULTI CID FTMS 0 0 0 5666 161873.15625 0.4310551117726985 10 -0.1642894744873047 2 Unmodified _LSDLEDRY_ REV__ENSG00000015133|ENST00000389857|CCDC88C 32.30548876998284 0.3644845974844379 6 {[TV]|[{I|L}S]}DQN 5 -1 52.945 0.0 0.0 5.2449 0.0 0.0 0.0 449.20798669986567 449.20798669986567 30.893943874995173 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.4247425010840047 0.3252574989159953 {[TV]|[{I|L}S]}DQN 5.2449 - 274 + 1 1.837 99437.6 0.7300000190734863 857 4809 5666 SUDHL4_400M_050219_2,5668 SUDHL4_400M_050219_2,5668,LSDLEDRY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5669 26.924 800.0 233010.0 25 0 22194.0 + 42038 VQTEVNREL 9 129 544.2914185602539 1086.5682841873077 2 544.2924682497978 MULTI CID FTMS 0 0 0 5666 94664.1875 0.6564076450235352 -5 0.07476806640625 3 Unmodified _VQTEVNREL_ ENSG00000117475|ENST00000367808|BLZF1 49.55428908609986 0.0413471690215031 6 [QT]VTTV[DP]QV 10 7 + 65.131 0.0 0.0 5.9942 5.9942 80.637 0.0 0.0 0.0 3.3514303449628926 5.012262311882758 3.3514303449628926 1.9897000433601804 0 1.1861818737241734 0.8538719643217619 0.5629529932484498 0.9258337024346172 [QT]VTTV[DP]QV;[QT]VTTVE[NP]V;{[QV]|[N{I|L}]|[RA]|[KV]}TTTV[DP]QV;{[QV]|[N{I|L}]|[RA]|[KV]}TTTVE[NP]V;[AG]TVTTV[DP]QV;[AG]VTTTV[DP]QV;[AG]TVTTVE[NP]V;[QT]VTTV[DP][AG]V;[AG]VTTTVE[NP]V;{[QV]|[N{I|L}]|[RA]|[KV]}TTTV[DP][AG]V 5.9942;5.8111;5.6858;5.5027;5.4046;5.322;5.2215;5.1508;5.1389;4.8424 -;-;-;-;-;-;-;-;-;- 2310 1 1.837 147573.0 0.6700000166893005 858 4809 5666 SUDHL4_400M_050219_2,5669 SUDHL4_400M_050219_2,5669,VQTEVNREL True True VQTEVNREL 26.924144 544.292468249798 1465395.5 5666.0 ENSG00000117475|ENST00000367808|BLZF1 3.301438013712565 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5671 26.929 44.0 790980.0 25 0 52127.0 + 28336 PSAHCPASTV 10 75 485.2265307405547 968.4385085479096 2 485.2265197634697 MULTI CID FTMS 0 0 0 5670 1029341.625 0.694668786199238 1 -0.0045700073242187 1 Unmodified _PSAHCPASTV_ REV__ENST00000295404.9_1_19:50194996-50204826:+|nuORF 24.020572477871973 0.4289996903560794 6 SPA{M(Oxidation (M))|F}PHN{[TV]|[{I|L}S]} 9 -1 + 65.428 0.0 0.0 6.756 6.756 90.316 0.0 0.0 0.0 54.10351040942807 15.924325916815931 15.924325916815931 9.208187539523747 0 1.6237125054200234 2.0 0.9559771852360796 0.0 SPA{M(Oxidation (M))|F}PHN{[TV]|[{I|L}S]};SPA{M(Oxidation (M))|F}PHGG{[TV]|[{I|L}S]};SP[WE]HN{[TV]|[{I|L}S]};SP[WE]HGG{[TV]|[{I|L}S]};S[WE]PHN{[TV]|[{I|L}S]};S[WE]PHGG{[TV]|[{I|L}S]} 6.756;5.8052;4.9722;4.0158;3.5656;2.6092 -;-;-;-;-;- 186 + 1 1.772 30683.9 1.0 859 4810 5670 SUDHL4_400M_050219_2,5671 SUDHL4_400M_050219_2,5671,PSAHCPASTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5675 26.955 800.0 212460.0 25 0 35688.0 + 17520 KPKSRSPTP 9 134 499.29188800144334 0 499.2911865115166 PEAK CID FTMS 0 0 0 5674 124412.578125 1.0 0 0.0 1 Unmodified _KPKSRSPTP_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 30.63653989081413 0.1077493867305487 6 PT[NG]{I|L} 5 8 25.19 0.0 0.0 2.5276 0.0 0.0 128.09092058269852 383.1948946588501 511.28581524154856 0.0 0.0 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.4247425010840047 PT[NG]{I|L} 2.5276 - 120 + 1 1.772 135534.9 0.9900000095367432 860 4813 5674 SUDHL4_400M_050219_2,5675 SUDHL4_400M_050219_2,5675,KPKSRSPTP True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5676 26.969 800.0 128340.0 25 0 10372.0 + 6393 DWAKLIKRL 9 148 381.5730267094525 1141.6972507285575 3 381.5721008181572 MULTI CID FTMS 0 0 0 5674 115710.0859375 1.0 0 0.0 2 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 4.5288652416199255 0.7565837746943351 6 {I|L}K[QP]E 5 -1 19.208 0.0 0.0 1.6824 0.0 0.0 528.3755360334 0.0 528.3755360334 0.0 6.109243748081781 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}K[QP]E 1.6824 - 48 1 1.772 87159.2 0.8700000047683716 861 4813 5674 SUDHL4_400M_050219_2,5676 SUDHL4_400M_050219_2,5676,DWAKLIKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5679 26.988 800.0 228320.0 25 0 14076.0 + 26174 NQEFMQEDIF 10 136 650.7810830306305 1299.547613128061 2 650.7817260622978 MULTI CID FTMS 0 0 0 5678 277505.1875 0.3239006332284907 -9 0.1329593658447265 1 Unmodified _NQEFMQEDIF_ REV__ENSG00000171385|ENST00000302127|KCND3;REV__nc|ENSG00000171385|Q9UK17-2|KCND3 17.11289562659939 0.5604042439455784 6 [AG]NA{M(Oxidation (M))|F}MTEQNA{M(Oxidation (M))|F} 12 -1 + 87.041 0.0 0.0 6.6978 6.6978 62.593 0.0 0.0 0.0 0.0 16.611814434466197 0.0 0.0 0 1.5172203223519531 1.6989700043360187 0.4247425010840047 2.278659694992122 [AG]NA{M(Oxidation (M))|F}MTEQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}MTEQNA{M(Oxidation (M))|F};[AG]NA{M(Oxidation (M))|F}H[HS]QNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}H[HS]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}MTEQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}H[HS]QNA{M(Oxidation (M))|F};{[QG]|[NA]}[{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}D]|MM}QQNA{M(Oxidation (M))|F};[AG][R{M(Oxidation (M))|F}]{[{M(Oxidation (M))|F}D]|MM}QQNA{M(Oxidation (M))|F};[AG]G[{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}D]|MM}QQNA{M(Oxidation (M))|F};[AG]GGA{M(Oxidation (M))|F}MTEQNA{M(Oxidation (M))|F} 6.6978;6.6978;6.6413;6.6413;6.328;6.2714;6.1434;6.1434;6.1006;6.0689 -;-;-;-;-;-;-;-;-;- 7967 1 1.772 137552.2 0.8999999761581421 862 4815 5678 SUDHL4_400M_050219_2,5679 SUDHL4_400M_050219_2,5679,NQEFMQEDIF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5680 27.002 800.0 167050.0 25 0 23965.0 + 29552 QLPKPTSTY 9 139 517.7788747992737 1033.5431966653473 2 517.7792236208916 MULTI CID FTMS 0 0 0 5678 149919.53125 1.0 0 0.0 2 Unmodified _QLPKPTSTY_ ENSG00000151445|ENST00000557658|VIPAS39;ENST00000553691.5_1_14:77907431-77919723:-|nuORF 30.63653989081413 0.1413794767160703 6 [Q{I|L}]PK[VG]ETY 9 3 + 54.515 0.0 0.0 5.2745 5.2745 87.142 0.0 0.0 0.0 31.949207453576 14.09256854528806 14.09256854528806 10.0 0 0.3054621874040891 2.0 0.8149093276264391 0.0 [Q{I|L}]PK[VG]ETY;[Q{I|L}]PK[PS]TTY;[Q{I|L}][QA][{I|L}P]TTY;[Q{I|L}]P[DV][KA]TY;[Q{I|L}]PKHH{M(Oxidation (M))|F}K;[Q{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RP][{M(Oxidation (M))|F}V];[VP]GTSG{I|L}Y[Q{I|L}];[Q{I|L}][RH]{I|L}{[CP]|[EA]}[PA];[Q{I|L}][Y{I|L}]S[VS][QP];[Q{I|L}][Y{I|L}]S{[QS]|[NT]}[VP] 5.2745;4.307;3.1994;3.0581;2.3693;1.6429;1.6087;1.5835;1.4759;1.4759 -;-;-;-;-;-;-;-;-;- 1096 + 1 1.772 105343.2 0.9100000262260436 863 4815 5678 SUDHL4_400M_050219_2,5680 SUDHL4_400M_050219_2,5680,QLPKPTSTY False True QLPKPTSTY 27.002273 517.779223620892 1621797.375 5678.0 ENSG00000151445|ENST00000557658|VIPAS39;;ENST00000553691.5_1_14:77907431-77919723:-|nuORF 6.782528400421143 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5681 27.016 800.0 80680.0 25 0 3932.5 + 42011 VQQPGQTNF 9 101 509.7514344971159 1017.4883160610318 2 509.7518798708916 MULTI CID FTMS 0 0 0 5678 163961.453125 0.4178810805816826 16 -0.2626209259033203 3 Unmodified _VQQPGQTNF_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 25.399314129420983 0.2080152500878129 6 {[QV]|[N{I|L}]|[RA]|[KV]}Q 3 6 18.345 0.0 0.0 1.803 0.0 0.0 0.0 659.2785436823787 659.2785436823787 2.215001545097209 0.0 0.0 0.0 0 0.5 0.0 0.0 0.2887254899964357 + {[QV]|[N{I|L}]|[RA]|[KV]}Q 1.803 + + 207 1 1.772 54307.4 0.9399999976158142 864 4815 5678 SUDHL4_400M_050219_2,5681 SUDHL4_400M_050219_2,5681,VQQPGQTNF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5684 27.036 800.0 108300.0 25 0 5042.6 + 25860 NLENHIILN 9 114 540.296275066391 1078.577997199582 2 540.2972289919853 MULTI CID FTMS 0 0 0 5683 97238.8671875 0.6118504440356235 -1 0.0039920806884765 1 Unmodified _NLENHIILN_ ENSG00000204361|ENST00000389586|NXPE2;nc|ENSG00000204361|Q96DL1-3|NXPE2;NXPE2|p.M335Nfs*8|1|0.33|ENSG00000204361|chr11:114705848-114705849|-/A|frameshift_variant 46.020951573049366 0.0490941689151868 6 {NN|[MP]|[D{I|L}]|[EV]}QHV{I|L}QQV 9 7 + 64.789 0.0 0.0 6.0069 6.0069 83.932 0.0 0.0 0.0 4.843793236071377 8.824995917031949 4.843793236071377 4.843793236071377 0 0.8737125054200234 0.9208187539523752 0.819341519366547 0.8807196863200843 {NN|[MP]|[D{I|L}]|[EV]}QHV{I|L}QQV;[AG]VEHV{I|L}QQV;{NN|[MP]|[D{I|L}]|[EV]}QHV{I|L}[AG]QV;{NN|[MP]|[D{I|L}]|[EV]}[AG]HV{I|L}QQV;{NN|[MP]|[D{I|L}]|[EV]}QH{I|L}VQQV;[AG]{I|L}DHV{I|L}QQV;{[QV]|[N{I|L}]|[RA]|[KV]}EHV{I|L}QQV;[AG]HD{I|L}V{I|L}QQV;[AG]VEH{I|L}VQQV;[AG]V[H{I|L}]D{I|L}QQV 6.0069;5.5578;5.1532;5.1532;5.1247;4.9097;4.8741;4.766;4.6756;4.6484 -;-;-;-;-;-;-;-;-;- 852 1 1.756 71663.8 0.8100000023841858 865 4817 5683 SUDHL4_400M_050219_2,5684 SUDHL4_400M_050219_2,5684,NLENHIILN True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5685 27.038 107.0 366430.0 25 0 20772.0 + 2621 ASSPEHPEL 9 71 483.730339621582 965.446126309964 2 483.7297546267509 MULTI CID FTMS 0 0 0 5683 558728.25 0.6963938714018931 6 -0.0747337341308593 2 Unmodified _ASSPEHPEL_ ENSG00000068308|ENST00000376488|OTUD5;nc|ENSG00000068308|Q96G74-2|OTUD5;nc|ENSG00000068308|Q96G74-3|OTUD5;nc|ENSG00000068308|Q96G74-4|OTUD5;nc|ENSG00000068308|Q96G74|OTUD5 26.88365393820708 0.1891292719743517 6 {[SA]|[TG]}S[RN]SH 7 6 34.001 0.0 0.0 3.5218 0.0 0.0 0.0 223.07282434635 223.07282434635 20.02197890818877 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.3807196863200844 0.0 {[SA]|[TG]}S[RN]SH 3.5218 - 120 + 1 1.756 34274.0 1.0 866 4817 5683 SUDHL4_400M_050219_2,5685 SUDHL4_400M_050219_2,5685,ASSPEHPEL False True ASSPEHPEL 27.038424 483.729754626751 5084532.5 5683.0 ENSG00000068308|ENST00000376488|OTUD5;;nc|ENSG00000068308|Q96G74-3|OTUD5;;nc|ENSG00000068308|Q96G74|OTUD5;;nc|ENSG00000068308|Q96G74-2|OTUD5;;nc|ENSG00000068308|Q96G74-4|OTUD5 7.264307657877604 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5686 27.052 800.0 55624.0 25 0 16243.0 -1 0 28 1178.4807721430088 3532.420487029227 3 1178.815844714642 MULTI CID FTMS 0 0 0 5683 171175.234375 0.3981559870036876 4 -0.0543785095214843 3 6 G 1 -1 6.9897 0.0 0.0 0.19787 0.0 0.0 2147.744658027077 1324.6221887595766 3472.3668467866537 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19787 - 7 + 1 1.756 47435.4 0.6000000238418579 867 4817 5683 SUDHL4_400M_050219_2,5686 SUDHL4_400M_050219_2,5686, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5689 27.061 64.0 606380.0 25 0 88690.0 + 33816 SLDQPTQTV 9 72 494.7508558169898 987.4871587007796 2 494.7506286501884 MULTI CID FTMS 0 0 0 5688 930786.0 0.0523268188424805 20 -0.3237018585205078 1 Unmodified _SLDQPTQTV_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 27.628801355627647 0.1796483985696185 6 {[TV]|[{I|L}S]}DQ 4 5 32.664 0.0 0.0 3.3078 0.0 0.0 0.0 541.262127533064 541.262127533064 -0.0308343376843112 0.0 -0.0308343376843112 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[TV]|[{I|L}S]}DQ 3.3078 + + 175 1 1.756 35435.8 1.0 868 4819 5688 SUDHL4_400M_050219_2,5689 SUDHL4_400M_050219_2,5689,SLDQPTQTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5690 27.064 118.0 415260.0 25 0 33456.0 -1 LGGSLMEYAI 10 77 535.2672363000411 1068.519919666882 2 535.2670165896416 MULTI CID FTMS 0 0 0 5688 510204.59375 0.0421043253387275 -14 0.2352485656738281 2 Oxidation (M) _LGGSLM(Oxidation (M))EYAI_ ENSG00000127483|ENST00000438032|HP1BP3;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;nc|ENSG00000127483|Q5SSJ5-3|HP1BP3 20.453626601364224 0.5043500229302764 6 QDTRGTA{I|L} 8 -1 65.84 0.0 0.0 6.1618 0.0 0.0 208.0854511945328 0.0 208.0854511945328 0.0 49.821844178516486 0.0 0.0 0 2.825257498915996 0.0 0.4247425010840047 0.0 QDTRGTA{I|L} 6.1618 - 536 1 1.756 43677.8 1.0 869 4819 5688 SUDHL4_400M_050219_2,5690 SUDHL4_400M_050219_2,5690,LGGSLMEYAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5691 27.07 369.0 247070.0 25 0 126890.0 + 39305 VAEAVKHW 8 70 470.2570804170945 0 470.2573119997978 PEAK CID FTMS 0 0 0 5688 172728.421875 0.8562142500803382 -2 0.03619384765625 3 Unmodified _VAEAVKHW_ REV__ENSG00000134247|ENST00000393203|PTGFRN 5.230669730166228 0.5807325378471833 6 Y 1 -1 3.9794 0.0 0.0 0.42402 0.0 0.0 704.3625209642688 68.05134760074452 772.4138685650133 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.42402 - 21 + 1 1.756 75426.4 1.0 870 4819 5688 SUDHL4_400M_050219_2,5691 SUDHL4_400M_050219_2,5691,VAEAVKHW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5694 27.091 800.0 169780.0 25 0 19339.0 + + 2572 SAIASTKVM 9 131 462.2471865590439 922.4798201848878 2 462.2463256716728 MULTI CID FTMS 0 0 0 5693 56743.08203125 0.2613281803476391 9 -0.1417827606201172 1 Unmodified _ASIAYAQSL_ nc|ENSG00000104442|Q9NVT9-2|ARMC1;ENSG00000104442|ENST00000276569|ARMC1 30.63653989081413 0.1413794767160703 6 [KT]YTSA[RP] 8 -1 + 29.2 0.0 0.0 3.1654 3.1654 76.439 0.0 0.0 0.0 5.399120845791181 16.43557456260286 5.399120845791181 6.629172106187575 0 0.9247425010840048 0.0 0.6307196863200843 0.0 [KT]YTSA[RP];[{I|L}A]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}HA[RP];[KT]SYTA[RP];[YT]KTSA[RP];[KT]Y{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RP];[WR]S{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L};[{I|L}A][HA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[RP];[WR]H[QP]S{I|L};[KP][HM]SA[RP];[WR]STKV{M(Oxidation (M))|F} 3.1654;2.4467;2.2493;2.2049;1.6078;1.0531;1.0172;0.86222;0.79455;0.73776 -;-;-;-;-;-;-;-;-;- 328 1 1.756 105671.5 0.5099999904632568 871 4821 5693 SUDHL4_400M_050219_2,5694 SUDHL4_400M_050219_2,5694,ASIAYAQSL False False SAIASTKVM 27.090522 462.2461 820426.1875 5693.0 nc|ENSG00000104442|Q9NVT9-2|ARMC1;;ENSG00000104442|ENST00000276569|ARMC1 4.1934982140858965 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5697 27.111 800.0 101020.0 25 0 21558.0 + + 15151 VQFGANKSQY 10 97 571.2851023244831 1140.555651715766 2 571.2853271365166 MULTI CID FTMS 0 0 0 5696 80674.3515625 0.7543181672749628 1 -0.030221939086914 1 Unmodified _INYEGRNYL_ ENSG00000160714|ENST00000292211|UBE2Q1;nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1 24.020572477871973 0.2255576514309169 6 {[QV]|[N{I|L}]|[RA]|[KV]}{[ET]|[MV]}{M(Oxidation (M))|F}Q[YN]{I|L} 9 -1 + 35.089 0.0 0.0 3.0765 3.0765 71.922 0.0 0.0 0.0 2.798859261803983 8.952424927286842 2.798859261803983 2.156818820794932 0 0.5 1.0969100130080565 0.3807196863200844 0.7742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}{[ET]|[MV]}{M(Oxidation (M))|F}Q[YN]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[ET]|[MV]}Q{M(Oxidation (M))|F}[YN]{I|L};{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}SQ[YN]{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}KSQ[YN]{I|L};{[QN]|[E{I|L}]|[KN]}QS{M(Oxidation (M))|F}Q[YN]{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NKSQ[YN]{I|L};{[QN]|[E{I|L}]|[KN]}QSQ{M(Oxidation (M))|F}[YN]{I|L};{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}S[AG][YN]{I|L};{[QN]|[E{I|L}]|[KN]}[AG]{M(Oxidation (M))|F}SQ[YN]{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}KS[AG][YN]{I|L} 3.0765;2.8874;2.8311;2.8272;2.4279;2.3463;2.2388;2.0238;2.0238;2.0199 -;-;-;-;-;-;-;-;-;- 1003 1 1.756 71552.8 0.5899999737739563 872 4823 5696 SUDHL4_400M_050219_2,5697 SUDHL4_400M_050219_2,5697,INYEGRNYL False False VQFGANKSQY 27.110895 571.285327136517 631615.25 5696.0 ENSG00000160714|ENST00000292211|UBE2Q1;;nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1 5.374736785888672 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5698 27.125 800.0 35453.0 25 0 8389.8 -1 0 49 657.2695497265047 3281.311366299524 5 657.4708740115166 MULTI CID FTMS 0 0 0 5696 75329.5234375 0.9782957718155806 -3 0.024332046508789 2 6 EESE 4 -1 23.391 0.0 0.0 0.71284 0.0 0.0 0.0 2804.1290902587607 2804.1290902587607 16.40092514408778 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.75 0.0 EESE 0.71284 - 130 1 1.756 34128.2 0.5 873 4823 5696 SUDHL4_400M_050219_2,5698 SUDHL4_400M_050219_2,5698, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5701 27.145 800.0 111340.0 25 0 15265.0 -1 CTPCCRLLFF 10 87 687.3142101159428 1372.6138672986856 2 687.3160888552666 MULTI CID FTMS 0 0 0 5700 114065.296875 0.4761966544808974 -6 0.072793960571289 1 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))TPC(Carbamidomethyl (C))C(Carbamidomethyl (C))RLLFF_ ENST00000264027.8_1_11:121163492-121174158:+|nuORF 14.838274106304384 0.5985701837916485 6 QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 57.017 0.0 0.0 4.1539 0.0 0.0 345.17622573066564 0.0 345.17622573066564 0.0 45.74870489715532 0.0 0.0 0 0.5 0.0 0.0 1.1549471895720984 QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.1539 - 304 1 1.756 69997.7 0.4699999988079071 874 4825 5700 SUDHL4_400M_050219_2,5701 SUDHL4_400M_050219_2,5701,CTPCCRLLFF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5702 27.159 800.0 58207.0 25 0 13278.0 -1 0 30 1091.7845044025808 3272.3316838079427 3 1092.454394519329 MULTI CID FTMS 0 0 0 5700 80895.8828125 0.6385790522928579 -7 0.0765571594238281 2 6 E 1 -1 5.4846 0.0 0.0 0.1676 0.0 0.0 2616.1064773643866 524.1625460260374 3140.269023390424 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.1676 - 2 + 1 1.756 49548.4 0.3600000143051147 875 4825 5700 SUDHL4_400M_050219_2,5702 SUDHL4_400M_050219_2,5702, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5704 27.175 800.0 90525.0 25 0 7116.3 + -1 EMWCINRNWPQ 11 86 775.3363008929401 1548.6580488526802 2 775.3359252810478 MULTI CID FTMS 0 0 0 5703 112428.25 0.0405212739549088 21 -0.3688869476318359 1 Carbamidomethyl (C),Oxidation (M) _EM(Oxidation (M))WC(Carbamidomethyl (C))INRNWPQ_ REV__ENST00000295974.12_1_4:41145057-41216499:-|nuORF;REV__ENST00000502682.1_1_4:41145057-41218531:-|nuORF;REV__ENST00000503555.5_1_4:41145057-41179590:-|nuORF 2.9952420565917617 0.861016188266951 6 {M(Oxidation (M))|F}ANQQN{M(Oxidation (M))|F}{M(Oxidation (M))|F}PQ 10 -1 82.657 0.0 0.0 5.3373 0.0 0.0 309.1352293210803 0.0 309.1352293210803 0.0 52.47933455448525 0.0 0.0 0 0.9247425010840048 0.0 0.0 2.004432191740108 {M(Oxidation (M))|F}ANQQN{M(Oxidation (M))|F}{M(Oxidation (M))|F}PQ 5.3373 - 4887 + 1 1.756 54108.7 0.4699999988079071 876 4826 5703 SUDHL4_400M_050219_2,5704 SUDHL4_400M_050219_2,5704,EMWCINRNWPQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5705 27.183 449.0 230380.0 25 0 47410.0 19622 LGDMIWEDL 9 99 546.2575821827578 1090.5006114323155 2 546.2557861208916 MULTI CID FTMS 0 0 0 5703 100740.2109375 0.3118415588408079 -6 0.0888290405273437 2 Unmodified _LGDMIWEDL_ ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10 23.1484247019978 0.2366544122328345 6 {[VA]|[{I|L}G]}E 3 6 22.932 0.0 0.0 2.1029 0.0 0.0 0.0 788.3292606845217 788.3292606845217 1.9627248839266545 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}E 2.1029 - 71 1 1.756 82411.6 1.0 877 4826 5703 SUDHL4_400M_050219_2,5705 SUDHL4_400M_050219_2,5705,LGDMIWEDL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5706 27.191 452.0 102470.0 25 0 4585.4 + 13423 HLMGRYRI 8 100 523.2878858337486 1044.5612187342972 2 523.2884399294853 MULTI CID FTMS 0 0 0 5703 89746.828125 1.0 0 0.0 3 Unmodified _HLMGRYRI_ REV__ENSG00000174032|ENST00000519676|SLC25A30 19.438996006549623 0.6237395211498085 6 H{I|L} 2 -1 35.802 0.0 0.0 3.4275 0.0 0.0 0.0 791.3957003229124 791.3957003229124 9.446603393793112 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 H{I|L} 3.4275 + + 109 + 1 1.756 40807.4 1.0 878 4826 5703 SUDHL4_400M_050219_2,5706 SUDHL4_400M_050219_2,5706,HLMGRYRI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5709 27.206 457.0 290320.0 25 0 18253.0 + 41305 VPHTRPVSL 9 104 503.2956380395608 1004.5767231459216 2 503.2963134646416 MULTI CID FTMS 0 0 0 5708 170946.375 0.0977588054129618 -13 0.2233867645263672 1 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 65.23502041540118 0.0231836506122253 6 VPHTR[VP]S{I|L} 9 0 + 78.313 0.0 0.0 7.7956 7.7956 97.868 0.0 0.0 0.0 63.377650909051326 4.556966466133716 4.556966466133716 78.3126635461355 0 0.7059771852360797 2.0 1.3962566630072957 0.0 + + VPHTR[VP]S{I|L} 7.7956 + + 187 + 1 1.756 105032.0 1.0 879 4828 5708 SUDHL4_400M_050219_2,5709 SUDHL4_400M_050219_2,5709,VPHTRPVSL True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5710 27.212 332.0 295270.0 25 0 59283.0 + 30961 RLAHYIDRV 9 98 381.55244796722 1141.63551450186 3 381.5523254275322 MULTI CID FTMS 0 0 0 5708 127174.609375 0.9458621483496924 -1 0.0040302276611328 2 Unmodified _RLAHYIDRV_ ENSG00000176619|ENST00000325327|LMNB2 11.517880264261096 0.5249077435482886 6 Y{I|L}DVR 5 6 18.684 0.0 0.0 1.6366 0.0 0.0 477.2802840140564 0.0 477.2802840140564 0.0 14.080306233405295 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 Y{I|L}DVR 1.6366 - 59 + 1 1.756 84997.0 1.0 880 4828 5708 SUDHL4_400M_050219_2,5710 SUDHL4_400M_050219_2,5710,RLAHYIDRV False True RLAHYIDRV 27.212103 381.552325427532 632254.5625 5708.0 ENSG00000176619|ENST00000325327|LMNB2 3.86898406346639 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5713 27.225 378.0 168600.0 25 0 17415.0 + 42808 VVKPPGSSL 9 86 442.2659085954192 882.5172642576384 2 442.2655212283134 MULTI CID FTMS 0 0 0 5712 147946.40625 0.2494238150948275 -9 0.1417827606201172 1 Unmodified _VVKPPGSSL_ ENSG00000163930|ENST00000460680|BAP1 26.88365393820708 0.1891292719743517 6 VVKD 4 6 38.5 0.0 0.0 4.3625 0.0 0.0 0.0 438.2327601811392 438.2327601811392 25.400990676322905 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 VVKD 4.3625 - 130 + 1 1.756 53985.8 1.0 881 4830 5712 SUDHL4_400M_050219_2,5713 SUDHL4_400M_050219_2,5713,VVKPPGSSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5714 27.235 536.0 187070.0 25 0 35758.0 + + 992 FAEAGRSTL 9 101 476.2482117327391 950.4818705322782 2 476.2481262087822 MULTI CID FTMS 0 0 0 5712 92540.4296875 0.7061424784298866 -5 0.0871734619140625 2 Unmodified _AFTRQTDI_ nc|ENSG00000140451|Q9H611-2|PIF1;nc|ENSG00000140451|Q9H611-3|PIF1;ENST00000560444.1_1_15:65114569-65116540:-|nuORF;ENST00000560504.1_1_15:65115949-65116540:-|nuORF;nc|ENSG00000140451|Q9H611-4|PIF1;ENSG00000140451|ENST00000559239|PIF1 28.486842064014134 0.4448922141344407 6 A[WR]AEAE 7 -1 46.726 0.0 0.0 4.9161 0.0 0.0 119.0739536969742 0.0 119.0739536969742 0.0 33.627363478019774 0.0 0.0 0 0.7742275032520141 0.0 0.4247425010840047 0.0 A[WR]AEAE 4.9161 - 151 1 1.756 82063.0 1.0 882 4830 5712 SUDHL4_400M_050219_2,5714 SUDHL4_400M_050219_2,5714,AFTRQTDI False False FAEAGRSTL 27.234684 476.248126208782 614334.8125 5712.0 nc|ENSG00000140451|Q9H611-2|PIF1;;nc|ENSG00000140451|Q9H611-3|PIF1;;ENST00000560444.1_1_15:65114569-65116540:-|nuORF;;ENST00000560504.1_1_15:65115949-65116540:-|nuORF;;nc|ENSG00000140451|Q9H611-4|PIF1;;ENSG00000140451|ENST00000559239|PIF1 2.6558581590652466 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5716 27.242 243.0 295270.0 25 0 22811.0 36396 SYRCHECGKAF 11 94 650.7810830306305 1299.547613128061 2 650.7813598513603 MULTI CID FTMS 0 0 0 5715 341897.4375 0.3990584734760979 7 -0.114786148071289 1 Unmodified _SYRCHECGKAF_ nc|ENSG00000269001|Q6ZRF7|ZNF818P 9.5439744041441 0.8301188422821563 6 {[QN]|[E{I|L}]|[KN]}AG[HD]AQQNA{M(Oxidation (M))|F} 12 9 + 82.691 0.0 0.0 6.3631 6.3631 79.174 0.0 0.0 0.0 2.165663336536639 3.8464343345171415 2.165663336536639 0.3527986669171952 0 0.8494850021680094 0.0 1.110924374808178 1.579689690656103 {[QN]|[E{I|L}]|[KN]}AG[HD]AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F};[AG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}Q[HD]AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AGA[HD]QQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AQ[HD]QQNA{M(Oxidation (M))|F};[HS][PG]DEAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG[HD]AQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG[HD]AQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG[HD]A[AG]QNA{M(Oxidation (M))|F} 6.3631;6.3359;6.1964;5.9285;5.8998;5.7985;5.7419;5.663;5.663;5.663 -;-;-;-;-;-;-;-;-;- 3165 1 1.756 56589.2 1.0 883 4831 5715 SUDHL4_400M_050219_2,5716 SUDHL4_400M_050219_2,5716,SYRCHECGKAF False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 5717 27.256 800.0 105030.0 25 0 9654.2 + -1 EGIYPCCTY 9 117 581.7301463808876 1161.4457398285751 2 581.7309448122978 MULTI CID FTMS 0 0 0 5715 83592.0859375 0.4426647908338266 -8 0.1401615142822265 2 2 Carbamidomethyl (C) _EGIYPC(Carbamidomethyl (C))C(Carbamidomethyl (C))TY_ REV__ENSG00000140326|ENST00000356231|CDAN1;REV__nc|ENSG00000140326|Q8IWY9-1|CDAN1 16.942295170755138 0.3780752226737986 6 TY 2 -1 27.519 0.0 0.0 2.3693 0.0 0.0 879.323798863105 0.0 879.323798863105 0.0 4.783474859079391 0.0 0.0 0 0.3807196863200844 0.0 0.2742275032520141 0.0 TY 2.3693 + + 159 + 1 1.756 70093.5 0.5299999713897705 884 4831 5715 SUDHL4_400M_050219_2,5717 SUDHL4_400M_050219_2,5717,EGIYPCCTY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5720 27.276 800.0 95728.0 25 0 8129.8 + -1 IHCYARQCYYQ 11 61 781.3361527860244 1560.6577526388487 2 781.3373901247978 MULTI CID FTMS 0 0 0 5719 89882.921875 0.7343659082036711 -1 0.0040225982666015 1 2 Carbamidomethyl (C) _IHC(Carbamidomethyl (C))YARQC(Carbamidomethyl (C))YYQ_ REV__ENSG00000165416|ENST00000310528|SUGT1;REV__ENST00000607588.1_1_13:52743381-52745380:-|nuORF;REV__nc|ENSG00000165416|Q9Y2Z0|SUGT1 13.042465956692816 0.7638483625850725 6 {M(Oxidation (M))|F}ANQQAEMWQ 10 -1 91.517 0.0 0.0 5.864 0.0 0.0 309.1308404788345 0.0 309.1308404788345 0.0 80.5474440082429 0.0 0.0 0 0.8807196863200843 0.0 0.3252574989159953 1.6549471895720984 {M(Oxidation (M))|F}ANQQAEMWQ 5.864 - 661 + 1 1.756 61751.3 0.4799999892711639 885 4833 5719 SUDHL4_400M_050219_2,5720 SUDHL4_400M_050219_2,5720,IHCYARQCYYQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5721 27.285 489.0 107480.0 25 0 10752.0 -1 0 59 604.2974535059612 603.2901770393612 1 604.2957641482353 MULTI CID FTMS 0 0 0 5719 83514.046875 0.0827674739143582 22 -0.4063529968261719 2 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VEP 5 -1 + 49.576 0.0 0.0 8.2176 8.2176 90.629 0.0 0.0 0.0 7.153691850126869 7.153691850126869 7.153691850126869 7.153691850126869 0 0.5138793319624578 1.5228787452803376 0.0 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VEP;YPVEP;[VP]EYP;[VP]YEP;[EP]VYP;{NN|[MP]|[D{I|L}]|[EV]}PYP 8.2176;7.0318;6.9536;6.8519;5.296;4.6364 -;-;-;-;-;- 44 1 1.756 41796.5 1.0 886 4833 5719 SUDHL4_400M_050219_2,5721 SUDHL4_400M_050219_2,5721, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5722 27.299 800.0 149030.0 25 0 68689.0 -1 0 33 1188.8140007321872 3563.420172796762 3 1189.476489245892 MULTI CID FTMS 0 0 0 5719 74610.03125 0.8074427473171154 -1 0.0040225982666015 3 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.756 82784.6 0.3199999928474426 887 4833 5719 SUDHL4_400M_050219_2,5722 SUDHL4_400M_050219_2,5722, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5725 27.319 800.0 120220.0 25 0 8263.9 + 16609 KEEEEEESN 9 130 561.7240179445457 1121.4334829558911 2 561.7230712771416 MULTI CID FTMS 0 0 0 5724 83710.9375 0.713548905236843 1 -0.0302085876464843 1 Unmodified _KEEEEEESN_ REV__ENSG00000085224|ENST00000373344|ATRX;REV__ENSG00000166197|ENST00000605788|NOLC1;REV__ENST00000477977.1_1_10:103920762-103923575:+|nuORF;REV__nc|ENSG00000085224|P46100-2|ATRX;REV__nc|ENSG00000085224|P46100-3|ATRX;REV__nc|ENSG00000085224|P46100-4|ATRX;REV__nc|ENSG00000085224|P46100-5|ATRX;REV__nc|ENSG00000166197|Q14978-2|NOLC1;REV__nc|ENSG00000166197|Q14978-3|NOLC1 3.5964929083625545 0.7891324200061827 6 S 1 -1 10.797 0.0 0.0 0.96278 0.0 0.0 106.05658878325852 925.2994007872228 1031.3559895704814 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 S 0.96278 + + 27 + 1 1.756 76831.6 0.550000011920929 888 4835 5724 SUDHL4_400M_050219_2,5725 SUDHL4_400M_050219_2,5725,KEEEEEESN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5726 27.333 800.0 180040.0 25 0 14293.0 + 30986 RLDDVSNDV 9 136 516.7513365924137 1031.4881202516274 2 516.7506591677666 MULTI CID FTMS 0 0 0 5724 107969.140625 0.4330501554870045 -5 0.0866355895996093 2 Unmodified _RLDDVSNDV_ ENSG00000164818|ENST00000297440|DNAAF5;nc|ENSG00000164818|Q86Y56-2|DNAAF5;nc|ENSG00000164818|Q86Y56-3|DNAAF5 47.594388314883695 0.0456443387682827 6 [DV]{[RE]|[WV]}VSNDV 9 4 + 69.671 0.0 0.0 6.7544 6.7544 82.841 0.0 0.0 0.0 2.04119982655925 16.478174818886373 2.04119982655925 2.04119982655925 0 0.8807196863200843 1.6989700043360187 0.7742275032520141 0.4247425010840047 [DV]{[RE]|[WV]}VSNDV;[R{I|L}]DDVSNDV;{NN|[MP]|[D{I|L}]|[EV]}RDVSNDV;[DV]{[RE]|[WV]}VSGGDV;[R{I|L}]DDVSGGDV;{NN|[MP]|[D{I|L}]|[EV]}RDVSGGDV;[DV][KS]QQNDV;[R{I|L}]DM{[{M(Oxidation (M))|F}H]|[RQ]}DV;[VS]DD[R{I|L}]NDV;{NN|[MP]|[D{I|L}]|[EV]}A[W{I|L}]SNDV 6.7544;6.5565;5.9908;5.8617;5.6638;5.098;4.7659;4.1161;4.0141;3.747 -;+;-;-;-;-;-;-;-;- + 698 1 1.756 113273.0 0.5199999809265137 889 4835 5724 SUDHL4_400M_050219_2,5726 SUDHL4_400M_050219_2,5726,RLDDVSNDV True True RLDDVSNDV 27.33279 516.750659167767 1159885.0 5724.0 nc|ENSG00000164818|Q86Y56-3|DNAAF5;;nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENSG00000164818|ENST00000297440|DNAAF5 6.527896245320638 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5728 27.338 5.7 6675100.0 25 0 553350.0 34488 SMLSFSDVAI 10 65 535.2672363000411 1068.519919666882 2 535.2676879763603 MULTI CID FTMS 0 0 0 5727 9874143.0 0.8148576755403223 3 -0.0468902587890625 1 Unmodified _SMLSFSDVAI_ ENSG00000187918|ENST00000641930|OR51I2 15.847184025352805 0.5816416552707754 6 QDT[WK]A{I|L} 7 8 59.385 0.0 0.0 5.5577 0.0 0.0 208.0867054108258 0.0 208.0867054108258 0.0 51.93774796429757 0.0 0.0 0 2.3807196863200843 0.0 0.4247425010840047 0.3494850021680094 QDT[WK]A{I|L} 5.5577 - 148 + 1 1.756 35780.5 1.0 890 4836 5727 SUDHL4_400M_050219_2,5728 SUDHL4_400M_050219_2,5728,SMLSFSDVAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5729 27.34 144.0 230010.0 25 0 27278.0 + 33817 SLDQPTQTV 9 75 494.7508558169898 987.4871587007796 2 494.7511169314384 MULTI CID FTMS 0 0 0 5727 295203.0625 0.0165956913546002 37 -0.7793083190917969 2 Unmodified _SLDQPTQTV_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 24.020572477871973 0.2255576514309169 6 {[TV]|[{I|L}S]}DQ 4 5 32.664 0.0 0.0 3.3078 0.0 0.0 0.0 541.2638670350171 541.2638670350171 -0.2151682533299492 0.0 -0.2151682533299492 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[TV]|[{I|L}S]}DQ 3.3078 + + 230 1 1.756 32276.6 1.0 891 4836 5727 SUDHL4_400M_050219_2,5729 SUDHL4_400M_050219_2,5729,SLDQPTQTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5730 27.345 266.0 348470.0 25 0 40773.0 38020 TPAFFSQTPI 10 115 554.7890573983185 1107.563561863437 2 554.7890502810478 MULTI CID FTMS 0 0 0 5727 215575.203125 0.5550293493295949 -5 0.0981101989746093 3 Unmodified _TPAFFSQTPI_ ENSG00000158711|ENST00000357992|ELK4 22.65808497894818 0.4596126414678359 6 TP{M(Oxidation (M))|F}K[TA]AY{I|L}P 10 7 + 55.609 0.0 0.0 5.0209 5.0209 87.485 0.0 0.0 0.0 34.20696227168975 8.661968799114845 8.661968799114845 15.21652514092061 0 1.0994850021680094 1.6989700043360187 0.0 0.0 TP{M(Oxidation (M))|F}K[TA]AY{I|L}P;TP{M(Oxidation (M))|F}K[TA]A[{I|L}P]Y;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[QA]{[QN]|[E{I|L}]|[KN]}YP{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KQ]{[QG]|[NA]}YP{I|L} 5.0209;3.647;0.68708;0.2563 -;-;-;- 213 + 1 1.756 77296.0 1.0 892 4836 5727 SUDHL4_400M_050219_2,5730 SUDHL4_400M_050219_2,5730,TPAFFSQTPI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5733 27.366 800.0 147560.0 25 0 13189.0 + 14172 IDEWRDLD 8 151 531.2469553869822 1060.4793578407644 2 531.2480346560478 MULTI CID FTMS 0 0 0 5732 67709.0546875 0.5897097515815166 -1 0.004058837890625 1 Unmodified _IDEWRDLD_ REV__ENSG00000185915|ENST00000379499|KLHL34 26.88365393820708 0.4786498634179528 6 {[TV]|[{I|L}S]}AANGWD{I|L}D 10 -1 + 57.488 0.0 0.0 5.4209 5.4209 87.846 0.0 0.0 0.0 0.5806199622822064 42.064180857256446 0.5806199622822064 10.243500300354142 0 0.6237125054200234 0.8239087409443188 0.4876954943324546 0.75 {[TV]|[{I|L}S]}AANGWD{I|L}D;{[TV]|[{I|L}S]}A[WQ]ND{I|L}D;{[TV]|[{I|L}S]}{[NV]|[RG]}[DG]ND{I|L}D;{[TV]|[{I|L}S]}AAGGGWD{I|L}D;{[TV]|[{I|L}S]}A[WQ]GGD{I|L}D;[{I|L}A]SANGWD{I|L}D;{[SA]|[TG]}{I|L}ANGWD{I|L}D;{[TV]|[{I|L}S]}QQGWD{I|L}D;[{M(Oxidation (M))|F}V]DN[DG]AA[VG]P;[{M(Oxidation (M))|F}V]DNENA[VG]P 5.4209;4.455;3.859;3.8495;3.5867;3.4251;3.1412;3.0621;2.9629;2.8841 -;-;-;-;-;-;-;-;-;- 1816 1 1.756 92582.8 0.4600000083446502 893 4838 5732 SUDHL4_400M_050219_2,5733 SUDHL4_400M_050219_2,5733,IDEWRDLD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5734 27.38 800.0 124380.0 25 0 12676.0 + 44350 YLQKETSTL 9 118 541.790491120322 1081.566429307444 2 541.7893554568291 MULTI CID FTMS 0 0 0 5732 109935.203125 0.5742434046326316 -3 0.046884536743164 2 Unmodified _YLQKETSTL_ ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4;nc|ENSG00000161813|Q71RC2-5|LARP4;nc|ENSG00000161813|Q71RC2-7|LARP4 86.33184430468982 0.0159826143231117 6 Y{I|L}QH 4 6 66.983 0.0 0.0 6.1931 0.0 0.0 0.0 537.2674654596311 537.2674654596311 13.978086624046355 0.0 0.0 0.0 0 1.3807196863200843 2.0 0.0 0.4247425010840047 Y{I|L}QH 6.1931 - 1102 + 1 1.756 81586.9 0.5199999809265137 894 4838 5732 SUDHL4_400M_050219_2,5734 SUDHL4_400M_050219_2,5734,YLQKETSTL True True YLQKETSTL 27.379675 541.789355456829 813097.125 5732.0 nc|ENSG00000161813|Q71RC2-4|LARP4;;nc|ENSG00000161813|Q71RC2-3|LARP4;;nc|ENSG00000161813|Q71RC2-2|LARP4;;nc|ENSG00000161813|Q71RC2-5|LARP4;;nc|ENSG00000161813|Q71RC2-7|LARP4;;ENSG00000161813|ENST00000398473|LARP4 6.243967533111572 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5737 27.39 194.0 439620.0 25 0 46766.0 -1 0 93 429.2339961971017 428.2267197305017 1 429.2332641482353 MULTI CID FTMS 0 0 0 5736 275546.125 0.7960814358991768 9 -0.1816120147705078 1 6 {M(Oxidation (M))|F} 1 -1 10.969 0.0 0.0 2.5615 0.0 0.0 263.147402569172 0.0 263.147402569172 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.5615 - 4 + 1 1.756 71272.5 1.0 895 4840 5736 SUDHL4_400M_050219_2,5737 SUDHL4_400M_050219_2,5737, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5738 27.398 473.0 125930.0 25 0 8077.6 -1 GATPCRMF 8 93 449.6991170920666 897.3836812509333 2 449.6992065310478 MULTI CID FTMS 0 0 0 5736 87783.3046875 0.7792011558203563 1 -0.042276382446289 2 Oxidation (M) _GATPCRM(Oxidation (M))F_ ENSG00000148985|ENST00000278243|PGAP2 15.768221252438446 0.6779680726941459 6 [AG]T 3 -1 19.92 0.0 0.0 2.2198 0.0 0.0 0.0 665.2541548439598 665.2541548439598 3.2046040785647314 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.25 0.0 [AG]T 2.2198 + + 123 1 1.756 52615.7 1.0 896 4840 5736 SUDHL4_400M_050219_2,5738 SUDHL4_400M_050219_2,5738,GATPCRMF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5739 27.412 800.0 137320.0 25 0 12318.0 + 26562 NVKVDPEIQ 9 127 521.2819901120539 1040.5494272909075 2 521.2827026247978 MULTI CID FTMS 0 0 0 5736 87985.0078125 0.8928261199944284 -2 0.034280776977539 3 Unmodified _NVKVDPEIQ_ CON__P35908;CON__P35908v2;ENSG00000172867|ENST00000309680|KRT2 38.61474834105838 0.0830609365873449 6 {[NV]|[RG]}KVD{I|L}EPQ 9 2 + 35.121 0.0 0.0 3.3752 3.3752 70.868 0.0 0.0 0.0 0.5954210046729926 22.35658179187159 0.5954210046729926 1.1413033536000938 0 1.2302046884880935 0.0 0.0 0.0 {[NV]|[RG]}KVD{I|L}EPQ;{[NV]|[RG]}KVD[EP]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NVD{I|L}EPQ;{[NV]|[RG]}[WR][EP]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NVD[EP]{I|L}Q;[KG][VG]VD{I|L}EPQ;{[NV]|[RG]}[WR]{I|L}EPQ;[KG][VG]VD[EP]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}GGVD{I|L}EPQ;[EP]DVK{[NV]|[RG]}{I|L}Q 3.3752;3.2655;2.6777;2.5858;2.568;2.3714;2.3414;2.2617;1.7928;1.7432 -;+;-;-;-;-;-;-;-;- + 420 1 1.756 87634.1 0.4699999988079071 897 4840 5736 SUDHL4_400M_050219_2,5739 SUDHL4_400M_050219_2,5739,NVKVDPEIQ True True NVKVDPEIQ 27.412193 521.2829 443366.84375 5736.0 P35908;;P35908v2;;ENSG00000172867|ENST00000309680|KRT2 5.689226150512695 2.0 True 9.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_2 5740 27.426 800.0 161580.0 25 0 6247.3 -1 0 116 708.8868084566 3539.39765995 5 709.2880737185478 MULTI CID FTMS 0 0 0 5736 73881.2578125 0.2257229252817287 -4 0.0509567260742187 4 6 EDTEEVEHWAHEAR[NS]H 17 -1 137.55 0.0 0.0 3.8861 0.0 0.0 0.0 1479.5532519174903 1479.5532519174903 91.53267383522322 0.0 0.0 0.0 0 1.774227503252014 0.0 2.1237125054200234 0.3807196863200844 EDTEEVEHWAHEAR[NS]H 3.8861 - 5655 + 1 1.756 95339.1 0.4099999964237213 898 4840 5736 SUDHL4_400M_050219_2,5740 SUDHL4_400M_050219_2,5740, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5743 27.436 171.0 276100.0 25 0 12721.0 + -1 PPWLLMTL 8 102 493.7723564348103 0 493.7721740603447 PEAK CID FTMS 0 0 0 5742 242803.09375 0.8152899118497903 -3 0.0504131317138671 1 Oxidation (M) _PPWLLM(Oxidation (M))TL_ REV__ENST00000404404.5_1_7:5036913-5037096:+|nuORF 26.34127834903884 0.298120260672589 6 N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}T 5 -1 26.044 0.0 0.0 2.6427 0.0 0.0 232.1415355218988 128.07178674869377 360.2133222705926 0.0 0.0 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 N{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}T 2.6427 - 151 + 1 1.756 41365.7 1.0 899 4842 5742 SUDHL4_400M_050219_2,5743 SUDHL4_400M_050219_2,5743,PPWLLMTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5744 27.445 512.0 197480.0 25 0 8859.9 + -1 SRPDSILGMQF 11 114 633.8104116747107 1265.6062704162214 2 633.8110839724541 MULTI CID FTMS 0 0 0 5742 226639.078125 0.0735798161552247 -11 0.195413589477539 2 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 32.78568957990786 0.3235288296534633 6 [AG]K{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 11 -1 + 89.267 0.0 0.0 7.0533 7.0533 84.425 0.0 0.0 0.0 15.783960731301676 3.265388705500129 3.265388705500129 2.7422750325201264 0 1.1237125054200234 2.0 1.0228787452803376 2.159379381312206 [AG]K{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]K{I|L}[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}K[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 7.0533;6.8366;6.332;6.332;6.1153;6.1153;5.8061;5.7522;5.6131;5.3964 -;-;-;-;-;-;-;-;-;- 2351 1 1.756 80522.8 1.0 900 4842 5742 SUDHL4_400M_050219_2,5744 SUDHL4_400M_050219_2,5744,SRPDSILGMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5745 27.449 203.0 351360.0 25 0 53311.0 -1 ILMEHIHKL 9 87 383.8863361286535 1148.6371789861605 3 383.8862182497978 MULTI CID FTMS 0 0 0 5742 210764.71875 0.323656764664217 -6 0.0973033905029296 3 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 30.7034409873982 0.1405282614900322 6 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L} 9 -1 + 59.797 0.0 0.0 5.2059 5.2059 90.665 0.0 0.0 0.0 42.10404643528406 10.379920780375542 10.379920780375542 59.79700329915836 0 0.0 1.5228787452803376 0.4247425010840047 0.2614393726401688 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L} 5.2059 + + 126 + 1 1.756 61228.6 1.0 901 4842 5742 SUDHL4_400M_050219_2,5745 SUDHL4_400M_050219_2,5745,ILMEHIHKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5746 27.457 461.0 173450.0 25 0 13385.0 + 17317 KLTEENTTL 9 121 524.779598292081 1047.544643650962 2 524.7794067263603 MULTI CID FTMS 0 0 0 5742 187952.84375 0.4399799384356354 -5 0.084686279296875 4 Unmodified _KLTEENTTL_ ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10 63.960520009940105 0.0238892913700936 6 [{I|L}T]KEENTT{I|L} 9 2 + 82.036 0.0 0.0 7.8312 7.8312 91.038 0.0 0.0 0.0 8.46787486224656 13.46787486224656 8.46787486224656 8.46787486224656 0 0.5 1.2218487496163564 1.674742501084005 0.4247425010840047 [{I|L}T]KEENTT{I|L};[K{I|L}]TEENTT{I|L};[{I|L}T]KEEGGTT{I|L};[{I|L}T]G{[TV]|[{I|L}S]}ENTT{I|L};[K{I|L}]TEEGGTT{I|L};[{I|L}T]G{[TV]|[{I|L}S]}EGGTT{I|L};[{I|L}T]KEE[C(Carbamidomethyl (C))R]{I|L};[{I|L}A]S{[TV]|[{I|L}S]}ENTT{I|L};[PS]{I|L}R{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}TT{I|L};[PS]NK[C(Carbamidomethyl (C))K]TT{I|L} 7.8312;7.0229;6.9522;6.3775;6.1439;5.0972;4.6375;4.4683;4.2259;4.2259 -;+;-;-;-;-;-;-;-;- + 1370 1 1.756 65337.7 1.0 902 4842 5742 SUDHL4_400M_050219_2,5746 SUDHL4_400M_050219_2,5746,KLTEENTTL True True KLTEENTTL 27.457045 524.77940672636 1851800.25 5742.0 nc|ENSG00000242265|Q86TG7-4|PEG10;;nc|ENSG00000242265|Q86TG7-2|PEG10;;ENSG00000242265|ENST00000612748|PEG10;;nc|ENSG00000242265|Q86TG7-3|PEG10;;nc|ENSG00000242265|Q86TG7-5|PEG10;;nc|ENSG00000242265|Q86TG7|PEG10 6.8064866065979 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5747 27.462 251.0 256040.0 25 0 32372.0 10873 GAEVELSAPV 10 93 486.25483819911295 970.495123465026 2 486.2538024783134 MULTI CID FTMS 0 0 0 5742 233235.21875 0.4217598831655605 -17 0.3013210296630859 5 Unmodified _GAEVELSAPV_ ENSG00000169169|ENST00000598293|CPT1C;ENST00000295404.9_1_19:50194996-50204826:+|nuORF;ENST00000599023.5_1_19:50195509-50213852:+|nuORF;ENST00000600944.5_1_19:50195509-50200723:+|nuORF;nc|ENSG00000169169|Q8TCG5-2|CPT1C;nc|ENSG00000169169|Q8TCG5-3|CPT1C 20.453626601364224 0.5043500229302764 6 [{I|L}T][RD]D 5 9 32.587 0.0 0.0 3.3578 0.0 0.0 0.0 367.1975496881469 367.1975496881469 18.60801848024778 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.3807196863200844 0.0 [{I|L}T][RD]D 3.3578 - 158 + 1 1.756 54959.1 1.0 903 4842 5742 SUDHL4_400M_050219_2,5747 SUDHL4_400M_050219_2,5747,GAEVELSAPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5749 27.466 35.0 1819700.0 25 0 196450.0 + 41306 VPHTRPVSL 9 72 503.2956380395608 1004.5767231459216 2 503.2957031130791 MULTI CID FTMS 0 0 0 5748 1532382.0 0.8763206225129092 2 -0.03192138671875 1 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 49.93300154707207 0.0405168250806675 6 VPHT 4 5 68.73 0.0 0.0 6.8417 0.0 0.0 0.0 567.3267502661525 567.3267502661525 56.74024714504206 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 1.274227503252014 0.0 + VPHT 6.8417 + + 38 + 1 1.756 55792.8 1.0 904 4843 5748 SUDHL4_400M_050219_2,5749 SUDHL4_400M_050219_2,5749,VPHTRPVSL True True VPHTRPVSL 27.466487 503.295703113079 34237275.0 5748.0 ENST00000412609.5_1_19:40170059-40174276:+|nuORF 7.46281894048055 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5750 27.474 404.0 196360.0 25 0 48729.0 + 41708 VPSKNTDI 8 107 437.2367793419139 0 437.2372314333916 PEAK CID FTMS 0 0 0 -1 0 2 Unmodified _VPSKNTDI_ REV__ENSG00000122507|ENST00000242067|BBS9;REV__nc|ENSG00000122507|Q3SYG4-2|BBS9;REV__nc|ENSG00000122507|Q3SYG4-3|BBS9;REV__nc|ENSG00000122507|Q3SYG4-4|BBS9;REV__nc|ENSG00000122507|Q3SYG4-7|BBS9 6.354104778181461 0.5763711549229614 6 PS 2 -1 19.024 0.0 0.0 2.1805 0.0 0.0 98.0448194989611 587.3053668120427 685.3501863110039 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 PS 2.1805 + + 120 + 1 1.756 65098.8 1.0 905 4843 5748 SUDHL4_400M_050219_2,5750 SUDHL4_400M_050219_2,5750,VPSKNTDI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5751 27.488 800.0 116660.0 25 0 7549.3 -1 0 101 885.8566377569949 3539.3974451615795 4 886.3593627810478 MULTI CID FTMS 0 0 0 5748 113554.203125 1.0 0 0.0 3 6 EDTEE{NN|[MP]|[D{I|L}]|[EV]}H{[QG]|[NA]}A 11 -1 77.026 0.0 0.0 2.1763 0.0 0.0 0.0 2311.8884635726613 2311.8884635726613 55.087969971425565 0.0 0.0 0.0 0 2.1549471895720984 0.0 1.3494850021680094 0.0 EDTEE{NN|[MP]|[D{I|L}]|[EV]}H{[QG]|[NA]}A 2.1763 - 1767 + 1 1.756 68508.0 0.4399999976158142 906 4843 5748 SUDHL4_400M_050219_2,5751 SUDHL4_400M_050219_2,5751, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5753 27.494 183.0 273600.0 25 0 41528.0 + 42809 VVKPPGSSL 9 77 442.2659085954192 882.5172642576384 2 442.2658874392509 MULTI CID FTMS 0 0 0 5752 282668.59375 0.4765528332028336 5 -0.0778083801269531 1 Unmodified _VVKPPGSSL_ ENSG00000163930|ENST00000460680|BAP1 42.09456458481378 0.0639583784996157 6 VVKD 4 6 44.693 0.0 0.0 5.0642 0.0 0.0 0.0 438.2315989246624 438.2315989246624 28.56176314493526 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 VVKD 5.0642 - 61 + 1 1.756 46514.5 1.0 907 4844 5752 SUDHL4_400M_050219_2,5753 SUDHL4_400M_050219_2,5753,VVKPPGSSL True True VVKPPGSSL 27.493624 442.265887439251 5881162.5 5752.0 ENSG00000163930|ENST00000460680|BAP1 5.931926409403483 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5756 27.514 800.0 70628.0 25 0 2567.2 + 8398 ESEELQQPFTD 11 113 661.7894369089036 1321.564320884607 2 662.2885619997978 MULTI CID FTMS 0 0 0 5755 65451.515625 0.6603608979174237 -5 0.0716571807861328 1 Unmodified _ESEELQQPFTD_ REV__ENSG00000168685|ENST00000303115|IL7R 7.608950283845883 0.8392484121837455 6 {NN|[MP]|[D{I|L}]|[EV]}DWWQQ 7 -1 22.508 0.0 0.0 1.7032 0.0 0.0 0.0 347.1366224805633 347.1366224805633 6.076731846699911 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.0 0.3054621874040891 {NN|[MP]|[D{I|L}]|[EV]}DWWQQ 1.7032 - 1032 1 1.756 47293.5 0.4600000083446502 908 4846 5755 SUDHL4_400M_050219_2,5756 SUDHL4_400M_050219_2,5756,ESEELQQPFTD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5757 27.528 800.0 144880.0 25 0 9233.7 + 12210 GQTGTKSVF 9 135 462.7429435872327 923.4713342412654 2 462.7428161501884 MULTI CID FTMS 0 0 0 5755 112470.578125 0.4486858636018392 -5 0.0716571807861328 2 Unmodified _GQTGTKSVF_ ENSG00000004897|ENST00000066544|CDC27;ENST00000525495.6_2_17:45219385-45266538:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 41.95555342248728 0.0647214845423414 6 {[QG]|[NA]}TGT[KS]V{M(Oxidation (M))|F} 9 0 + 43.783 0.0 0.0 4.7412 4.7412 86.57 0.0 0.0 0.0 20.95229386281659 9.399210985486604 9.399210985486604 15.26728180278311 0 1.3494850021680094 0.6989700043360187 0.0 0.4247425010840047 + + {[QG]|[NA]}TGT[KS]V{M(Oxidation (M))|F};{[QG]|[NA]}[Y{I|L}][TP]V{M(Oxidation (M))|F};{[QG]|[NA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[KS]V{M(Oxidation (M))|F};{[QG]|[NA]}[Y{I|L}]Y{I|L}[PA];{[QG]|[NA]}T{[HG]|PP}{[QS]|[NT]}[{I|L}P];[KT]ASS{[QG]|[NA]}V{M(Oxidation (M))|F};[KT]ASG{[QS]|[NT]}V{M(Oxidation (M))|F};{[QG]|[NA]}[Y{I|L}]YA[{I|L}P];[KT][SG]T{[QG]|[NA]}V{M(Oxidation (M))|F};[KT]{[QS]|[NT]}{[QS]|[NT]}V{M(Oxidation (M))|F} 4.7412;3.0879;2.4457;0.49807;0.35694;0.34455;0.25018;0.1721;0.1105;0.063875 +;-;-;-;-;-;-;-;-;- + 249 + 1 1.756 93786.4 0.4699999988079071 909 4846 5755 SUDHL4_400M_050219_2,5757 SUDHL4_400M_050219_2,5757,GQTGTKSVF True True GQTGTKSVF 27.527897 462.742816150188 1228029.5 5755.0 ENST00000525495.6_2_17:45219385-45266538:-|nuORF;;ENSG00000004897|ENST00000066544|CDC27;;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;;nc|ENSG00000004897|P30260-2|CDC27 5.260879993438721 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5760 27.54 308.0 323830.0 25 0 34843.0 + 11840 GLQEGTHEL 9 126 492.2433061371232 982.4720593410464 2 492.2430297732353 MULTI CID FTMS 0 0 0 5759 250218.359375 0.4424066772957887 -6 0.1018753051757812 1 Unmodified _GLQEGTHEL_ ENSG00000174780|ENST00000642900|SRP72;nc|ENSG00000174780|O76094-2|SRP72 34.10243960390752 0.1078313939113124 6 {[VA]|[{I|L}G]}Q 3 6 29.309 0.0 0.0 2.9832 0.0 0.0 0.0 681.284656347159 681.284656347159 9.935822444757232 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {[VA]|[{I|L}G]}Q 2.9832 + + 460 1 1.756 79058.7 1.0 910 4848 5759 SUDHL4_400M_050219_2,5760 SUDHL4_400M_050219_2,5760,GLQEGTHEL True True GLQEGTHEL 27.540134 492.243029773235 2732284.5 5759.0 nc|ENSG00000174780|O76094-2|SRP72;;ENSG00000174780|ENST00000642900|SRP72 6.232131481170654 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5761 27.554 800.0 138950.0 25 0 8720.3 + 7201 EEQLQQIRAE 10 113 622.317792605931 1242.621032278662 2 622.3177978396416 MULTI CID FTMS 0 0 0 5759 109839.890625 0.846115339562951 -1 0.0040664672851562 2 Unmodified _EEQLQQIRAE_ CON__P02535-1;CON__P13645;ENSG00000186395|ENST00000269576|KRT10 94.90867108109512 0.0089818344207408 6 EEQ{I|L}QQ{I|L}RAE 10 0 + 87.862 0.0 0.0 7.0707 7.0707 90.412 0.0 0.0 0.0 60.93898213257006 15.48205850142341 15.48205850142341 9.164539485499262 0 1.4361818737241734 1.6989700043360187 1.2150302283996908 1.110924374808178 + + EEQ{I|L}QQ{I|L}RAE;EE[AG]{I|L}QQ{I|L}RAE;EEQ{I|L}[AG]Q{I|L}RAE;EEQ{I|L}Q[AG]{I|L}RAE;EE[AG]{I|L}[AG]Q{I|L}RAE;EE[AG]{I|L}Q[AG]{I|L}RAE;EEQ{I|L}[AG][AG]{I|L}RAE;EEQ{I|L}QV{M(Oxidation (M))|F}{I|L}[HT];[AG]Q{I|L}{M(Oxidation (M))|F}VQ{I|L}Q[HC];[AG]{I|L}R{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L}Q[HC] 7.0707;6.3332;6.3332;6.3332;5.5985;5.5985;5.5985;4.8913;4.3087;4.2583 +;-;-;-;-;-;-;-;-;- + 929 + 1 1.756 87573.6 0.5199999809265137 911 4848 5759 SUDHL4_400M_050219_2,5761 SUDHL4_400M_050219_2,5761,EEQLQQIRAE True True EEQLQQIRAE 27.553971 622.317797839642 571658.8125 5759.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 5.7936075528462725 2.0 True 10.0 False contaminant PXD020620_cell_line SUDHL4_400M_050219_2 5762 27.565 654.0 93982.0 25 0 6734.8 + 26241 NQKPPSAEF 9 88 509.25335457746974 1016.4921562217396 2 509.2529785037041 MULTI CID FTMS 0 0 0 5759 88755.3671875 0.4736578365952598 -6 0.1018753051757812 3 Unmodified _NQKPPSAEF_ ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST 34.40172386719151 0.1061884637610825 6 E{M(Oxidation (M))|F} 2 7 25.969 0.0 0.0 2.5548 0.0 0.0 722.3705311505875 0.0 722.3705311505875 0.0 2.5476406049482847 0.0 0.0 0 0.5 0.0 0.0 0.0 + E{M(Oxidation (M))|F} 2.5548 + + 176 1 1.756 53668.5 1.0 912 4848 5759 SUDHL4_400M_050219_2,5762 SUDHL4_400M_050219_2,5762,NQKPPSAEF True True NQKPPSAEF 27.565361 509.252978503704 3200729.75 5759.0 nc|ENSG00000151914|Q03001-14|DST;;nc|ENSG00000151914|Q03001-8|DST;;nc|ENSG00000151914|Q03001|DST;;ENSG00000151914|ENST00000680361|DST 6.350000699361165 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5767 27.594 800.0 151490.0 25 0 12383.0 + 14931 ILMEHIHKL 9 137 575.3242665721965 1148.633980211193 2 575.3257324099541 MULTI CID FTMS 0 0 0 5766 74230.921875 0.5790958492705869 1 -0.0354862213134765 1 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 61.60191391372663 0.0251951588191061 6 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L} 9 0 + 98.246 0.0 0.0 8.5533 8.5533 97.868 0.0 0.0 0.0 77.84924269648207 10.831794521717896 10.831794521717896 31.57644705515452 0 2.166386562212267 2.0 0.7614393726401688 0.2134679910804404 + + {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}[C(Carbamidomethyl (C))R]K{I|L};{I|L}{I|L}[WY]{I|L}SE{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[RD]{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[{I|L}A]MSE{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[RD][MN]K{I|L};{I|L}{I|L}[WY][WQ]K{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[HT][RH]{I|L}{I|L};[{M(Oxidation (M))|F}E][H{I|L}]{I|L}{I|L}HK{I|L};[H{I|L}][DP]{I|L}{I|L}SE{I|L}{I|L} 8.5533;5.8042;3.4446;3.3296;3.0043;2.8133;2.2949;2.1815;1.3887;1.0749 +;-;-;-;-;-;-;-;-;- + 704 + 1 1.756 94670.2 0.5600000023841858 913 4852 5766 SUDHL4_400M_050219_2,5767 SUDHL4_400M_050219_2,5767,ILMEHIHKL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5768 27.601 428.0 232130.0 25 0 108880.0 -1 0 74 470.25685510359057 469.2495786369906 1 470.2567932009697 MULTI CID FTMS 0 0 0 5766 153328.0 0.7698005726166188 -4 0.0454082489013671 2 6 GAP 3 -1 3.1998 0.0 0.0 0.68191 0.0 0.0 226.1274453135515 0.0 226.1274453135515 0.0 0.7255998297264217 0.0 0.0 0 0.274227503252014 0.0 0.0 0.0 GAP 0.68191 - 27 + 1 1.756 82116.8 1.0 914 4852 5766 SUDHL4_400M_050219_2,5768 SUDHL4_400M_050219_2,5768, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5769 27.613 661.0 153740.0 25 0 16919.0 42608 VTSATSLQI 9 125 460.257821248545 918.50108956389 2 460.2577697634697 MULTI CID FTMS 0 0 0 5766 97698.625 1.0 0 0.0 3 Unmodified _VTSATSLQI_ ENSG00000130764|ENST00000378251|LRRC47 26.88365393820708 0.1891292719743517 6 {[DA]|[EG]}{I|L}G 4 7 28.672 0.0 0.0 3.1216 0.0 0.0 0.0 559.3102511041624 559.3102511041624 15.655014719405685 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 {[DA]|[EG]}{I|L}G 3.1216 - 334 + 1 1.756 83915.3 1.0 915 4852 5766 SUDHL4_400M_050219_2,5769 SUDHL4_400M_050219_2,5769,VTSATSLQI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5771 27.619 92.0 352160.0 25 0 24861.0 + -1 GVVTDMFTAI 10 71 535.2672363000411 1068.519919666882 2 535.2670165896416 MULTI CID FTMS 0 0 0 5770 510666.25 0.0421424232413783 20 -0.4992351531982422 1 Oxidation (M) _GVVTDM(Oxidation (M))FTAI_ REV__ENSG00000164659|ENST00000450689|ELAPOR2 19.256988751693697 0.5244284437930726 6 QD[WK]TA{I|L} 7 -1 46.203 0.0 0.0 4.324 0.0 0.0 208.08502394843907 0.0 208.08502394843907 0.0 40.71796966806488 0.0 0.0 0 1.5 0.0 0.4247425010840047 0.0 QD[WK]TA{I|L} 4.324 - 69 1 1.756 29833.4 1.0 916 4853 5770 SUDHL4_400M_050219_2,5771 SUDHL4_400M_050219_2,5771,GVVTDMFTAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5772 27.633 800.0 108900.0 25 0 20055.0 38021 TPAFFSQTPI 10 115 554.7890573983185 1107.563561863437 2 554.7883788943291 MULTI CID FTMS 0 0 0 5770 56515.37109375 0.1455069469520401 12 -0.3160076141357422 2 Unmodified _TPAFFSQTPI_ ENSG00000158711|ENST00000357992|ELK4 16.149105407346934 0.5765757077271437 6 [EP]VY[TA]K[PG]{M(Oxidation (M))|F} 10 8 + 24.683 0.0 0.0 2.2286 2.2286 70.874 0.0 0.0 0.0 2.213403050078778 2.213403050078778 2.213403050078778 2.213403050078778 0 0.0 1.2218487496163564 0.0 0.0 [EP]VY[TA]K[PG]{M(Oxidation (M))|F};T{[MS]|[{M(Oxidation (M))|F}A]}K[RP]YEP;[EP]V[QT][HS]T{I|L}P;[EP]V[{I|L}P][PS]C(Carbamidomethyl (C)){I|L}P;T{[WT]|[RM]}RRYEP 2.2286;2.0287;1.4003;1.0364;1.013 -;-;-;-;- 261 1 1.756 75441.3 0.4900000095367431 917 4853 5770 SUDHL4_400M_050219_2,5772 SUDHL4_400M_050219_2,5772,TPAFFSQTPI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5773 27.642 522.0 122080.0 25 0 21334.0 + 35910 SVNGERLGTY 10 75 548.2741765113427 1094.533800089485 2 548.2732421755791 MULTI CID FTMS 0 0 0 5770 94915.2109375 0.9742299294343384 -1 0.0354862213134765 3 Unmodified _SVNGERLGTY_ ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF 27.22323531849824 0.3570408936368626 6 [VS][TP]Y[HK]TY 9 6 + 53.675 0.0 0.0 4.9039 4.9039 87.858 0.0 0.0 0.0 24.244974475172043 2.961434083857526 2.961434083857526 20.00508444608478 0 0.7742275032520141 2.0 0.3494850021680094 0.805462187404089 [VS][TP]Y[HK]TY;[VS]NG[CS][YR][{I|L}P];[VS]NG[KS]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{I|L}P];[VS]N[C(Carbamidomethyl (C))S][YR][{I|L}P] 4.9039;3.0762;2.8735;2.4794 -;-;-;- 58 + 1 1.756 52582.6 1.0 918 4853 5770 SUDHL4_400M_050219_2,5773 SUDHL4_400M_050219_2,5773,SVNGERLGTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5774 27.648 347.0 219300.0 25 0 69278.0 + 39710 VEHIGGPY 8 87 436.2195366121152 0 436.2199890017509 PEAK CID FTMS 0 0 0 5770 115777.140625 0.5077992440033189 -4 0.0475044250488281 4 Unmodified _VEHIGGPY_ REV__CON__P35908;REV__CON__P35908v2;REV__ENSG00000172867|ENST00000309680|KRT2 2.889219685676258 0.5898224805723975 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.756 62743.9 1.0 919 4853 5770 SUDHL4_400M_050219_2,5774 SUDHL4_400M_050219_2,5774,VEHIGGPY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5775 27.662 800.0 251900.0 25 0 22281.0 4730 DEEMKEAAGSL 11 139 590.2656087709605 1178.516664608721 2 590.2657958865166 MULTI CID FTMS 0 0 0 5770 100874.359375 0.073152133200456 -8 0.1192455291748046 5 Unmodified _DEEMKEAAGSL_ ENSG00000053254|ENST00000557258|FOXN3;nc|ENSG00000053254|O00409|FOXN3 28.49450938151212 0.4231428536161201 6 QHVDAAEK 8 9 78.363 0.0 0.0 6.6493 0.0 0.0 282.0828820880998 0.0 282.0828820880998 0.0 35.78508689054182 0.0 0.0 0 2.579689690656103 0.0 0.0 1.3996498648046138 QHVDAAEK 6.6493 - 1290 1 1.756 151204.1 0.5 920 4853 5770 SUDHL4_400M_050219_2,5775 SUDHL4_400M_050219_2,5775,DEEMKEAAGSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5778 27.672 194.0 272720.0 25 0 30358.0 + 12253 GQYPTQPTY 9 80 527.7454733714261 1053.476393809652 2 527.7456542849541 MULTI CID FTMS 0 0 0 5777 278532.71875 0.0107389279910878 -9 0.1683063507080078 1 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 25.399314129420983 0.2080152500878129 6 [TP]QY 4 5 30.01 0.0 0.0 2.8487 0.0 0.0 0.0 561.2310684524833 561.2310684524833 4.348331157524967 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.6989700043360187 0.0 [TP]QY 2.8487 - 151 1 1.756 44592.3 1.0 921 4855 5777 SUDHL4_400M_050219_2,5778 SUDHL4_400M_050219_2,5778,GQYPTQPTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5779 27.683 639.0 123020.0 25 0 23111.0 + 37430 TLDEKIEKV 9 104 537.8057944303339 1073.5970359274677 2 537.8054077029228 MULTI CID FTMS 0 0 0 5777 115007.0390625 0.7861618456497738 -5 0.0965595245361328 2 Unmodified _TLDEKIEKV_ ENSG00000124228|ENST00000618172|DDX27;ENST00000484427.5_1_20:47835892-47850293:+|nuORF;nc|ENSG00000124228|Q96GQ7|DDX27 43.476825903602695 0.0563704125597561 6 T{I|L}DEK{I|L}EKV 9 0 + 74.506 0.0 0.0 6.9398 6.9398 84.221 0.0 0.0 0.0 46.16345464593326 6.581309933726274 6.581309933726274 2.7865969499212326 0 1.8539171939081167 2.0 0.3807196863200844 0.0 + + T{I|L}DEK{I|L}EKV;T{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}RDPV;[{I|L}T]D[VG]T{I|L}EKV;[{I|L}T]DR{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VPV;T{I|L}WW{I|L}EKV;[{I|L}T]D[VG]E[{I|L}T]KV;T{I|L}V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HC]KV;[{I|L}T]VGDT{I|L}EKV;[{I|L}T]AAET{I|L}EKV;[{I|L}T]VGDE[{I|L}T]KV 6.9398;6.6802;5.1717;5.0855;5.0354;4.8047;4.7443;4.722;4.4054;4.355 +;-;-;-;-;-;-;-;-;- + 930 + 1 1.756 65554.6 1.0 922 4855 5777 SUDHL4_400M_050219_2,5779 SUDHL4_400M_050219_2,5779,TLDEKIEKV True True TLDEKIEKV 27.683423 537.805407702923 647341.8125 5777.0 ENST00000484427.5_1_20:47835892-47850293:+|nuORF;;ENSG00000124228|ENST00000618172|DDX27;;nc|ENSG00000124228|Q96GQ7|DDX27 4.072557131449382 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5780 27.694 610.0 118210.0 25 0 5309.2 + 16548 KAWENSPNV 9 115 522.7591294165611 1043.503705899922 2 522.7588378787041 MULTI CID FTMS 0 0 0 5777 164603.34375 0.6734375564348245 -3 0.0886096954345703 3 Unmodified _KAWENSPNV_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 82.5293158979368 0.0169039238599547 6 {[QV]|[N{I|L}]|[RA]|[KV]}TWNSPNV 9 3 + 68.608 0.0 0.0 6.5747 6.5747 89.894 0.0 0.0 0.0 14.472866586712769 15.734516264678533 14.472866586712769 9.208187539523747 0 0.6677353201839438 1.3010299956639813 0.6989700043360187 1.907696035647464 {[QV]|[N{I|L}]|[RA]|[KV]}TWNSPNV;{[QV]|[N{I|L}]|[RA]|[KV]}TWGGSPNV;[KA]WENSPNV;{[QV]|[N{I|L}]|[RA]|[KV]}TSNWPNV;[KA]EWNSPNV;{[QV]|[N{I|L}]|[RA]|[KV]}G{[ET]|[MV]}NSPNV;[NP]SMKASPNV;[KA]WEGGSPNV;[KA]EWGGSPNV;{[VA]|[{I|L}G]}GTWNSPNV 6.5747;5.6923;5.1878;5.1342;5.1157;4.9546;4.9409;4.3054;4.2332;4.0119 -;-;+;-;-;-;-;-;-;- + 790 1 1.756 68927.2 1.0 923 4855 5777 SUDHL4_400M_050219_2,5780 SUDHL4_400M_050219_2,5780,KAWENSPNV True True KAWENSPNV 27.694096 522.758837878704 1149641.875 5777.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 8.69906489054362 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5782 27.699 31.0 995630.0 25 0 59136.0 + -1 SRPDSILGMQF 11 67 633.8104116747107 1265.6062704162214 2 633.8110229372978 MULTI CID FTMS 0 0 0 5781 1525865.5 0.4953819257316131 3 -0.0729236602783203 1 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 20.41453444215458 0.6105011870913812 6 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 50.826 0.0 0.0 4.0159 4.0159 76.704 0.0 0.0 0.0 3.177418734074564 37.15350013324773 3.177418734074564 3.997420708064503 0 0.8609243748081782 0.0 0.0 1.1861818737241734 [KQ]{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[KQ]{I|L}[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[RH]{M(Oxidation (M))|F}A[KG][Y{I|L}]Q{M(Oxidation (M))|F};[RH]{M(Oxidation (M))|F}[KQ][Y{I|L}]Q{M(Oxidation (M))|F} 4.0159;3.7001;3.2918;3.2918;2.9759;2.9759;2.5705;2.2547;1.8268;1.3107 -;-;-;-;-;-;-;-;-;- 208 1 1.756 30831.7 1.0 924 4856 5781 SUDHL4_400M_050219_2,5782 SUDHL4_400M_050219_2,5782,SRPDSILGMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5783 27.705 313.0 167920.0 25 0 24669.0 + 23041 RLDSTGVNV 9 94 480.75838643481177 959.5022199364236 2 480.7587768435478 MULTI CID FTMS 0 0 0 5781 130344.765625 0.261086987234254 -6 0.1246700286865234 2 Unmodified _LSKREDNV_ ENSG00000196550|ENST00000367128|FAM72A;ENSG00000215784|ENST00000400889|FAM72D;ENSG00000263513|ENST00000584486|FAM72C;nc|ENSG00000196550|Q5TYM5-2|FAM72A 21.74664581756881 0.5868176546531598 6 GVNV 4 6 36.983 0.0 0.0 3.8543 0.0 0.0 572.2911244123062 0.0 572.2911244123062 0.0 20.58282230130842 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 GVNV 3.8543 - 129 1 1.756 46223.7 1.0 925 4856 5781 SUDHL4_400M_050219_2,5783 SUDHL4_400M_050219_2,5783,LSKREDNV False False RLDSTGVNV 27.704927 480.758776843548 2388362.5 5781.0 ENSG00000196550|ENST00000367128|FAM72A;;ENSG00000215784|ENST00000400889|FAM72D;;ENSG00000263513|ENST00000584486|FAM72C;;nc|ENSG00000196550|Q5TYM5-2|FAM72A 4.413900216420491 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5785 27.71 126.0 431500.0 25 0 37634.0 23624 LTQDAPDLV 9 102 486.25483819911295 970.495123465026 2 486.2548095583916 MULTI CID FTMS 0 0 0 5784 437197.5625 0.7905855465075119 -2 0.0389480590820312 1 Unmodified _LTQDAPDLV_ ENST00000271688.10_1_1:150941549-150947423:-|nuORF 20.453626601364224 0.2830276176381075 6 [{I|L}T][C(Carbamidomethyl (C))H]Q 5 7 25.915 0.0 0.0 2.6703 0.0 0.0 0.0 328.18804251430555 328.18804251430555 11.311056041451623 0.0 0.0 0.0 0 0.5 2.0 0.6989700043360187 0.0 [{I|L}T][C(Carbamidomethyl (C))H]Q 2.6703 - 98 1 1.756 48563.9 1.0 926 4857 5784 SUDHL4_400M_050219_2,5785 SUDHL4_400M_050219_2,5785,LTQDAPDLV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5786 27.714 211.0 296480.0 25 0 43891.0 -1 ILMEHIHKL 9 88 383.8863361286535 1148.6371789861605 3 383.8864318728447 MULTI CID FTMS 0 0 0 5784 181248.90625 0.2783313779636232 9 -0.2744579315185547 2 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 26.020703789607367 0.2001090068861241 6 {I|L}{I|L}{M(Oxidation (M))|F}E[H{I|L}]H{I|L}K 9 -1 + 57.67 0.0 0.0 5.0207 5.0207 89.81 0.0 0.0 0.0 44.0018312907727 6.879810057907001 6.879810057907001 57.66952909867005 0 0.0 1.6989700043360187 0.4247425010840047 0.25 {I|L}{I|L}{M(Oxidation (M))|F}E[H{I|L}]H{I|L}K 5.0207 - 112 + 1 1.756 56006.3 1.0 927 4857 5784 SUDHL4_400M_050219_2,5786 SUDHL4_400M_050219_2,5786,ILMEHIHKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5787 27.72 317.0 237980.0 25 0 27505.0 + 26978 PEFQLLKRL 9 90 381.9015084531294 1142.6826959595885 3 381.9018737673759 MULTI CID FTMS 0 0 0 5784 239445.046875 1.0 0 0.0 3 Unmodified _PEFQLLKRL_ REV__ENST00000553315.1_2_14:75373719-75374108:-|nuORF 7.608950283845883 0.6490595679007971 6 {M(Oxidation (M))|F}[EP]K{I|L}K[R{I|L}]{I|L} 9 -1 + 26.699 0.0 0.0 2.3365 2.3365 82.293 0.0 0.0 0.0 6.253797948791199 0.6683417370659974 0.6683417370659974 26.699110542515182 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}[EP]K{I|L}K[R{I|L}]{I|L} 2.3365 - 36 + 1 1.756 64599.5 1.0 928 4857 5784 SUDHL4_400M_050219_2,5787 SUDHL4_400M_050219_2,5787,PEFQLLKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5788 27.729 522.0 212040.0 25 0 50002.0 + 30984 RLDDNIRTV 9 120 551.303894970377 1100.593237007554 2 551.3037597537041 MULTI CID FTMS 0 0 0 5784 135781.515625 0.7969010422326465 -1 0.0108375549316406 4 Unmodified _RLDDNIRTV_ ENSG00000141252|ENST00000437048|VPS53;ENST00000575207.5_1_17:560762-617949:-|nuORF;nc|ENSG00000141252|Q5VIR6-1|VPS53;nc|ENSG00000141252|Q5VIR6-2|VPS53;nc|ENSG00000141252|Q5VIR6-3|VPS53 55.24861242081279 0.0288621114503864 6 VG{I|L}DDN{I|L}R{[TV]|[{I|L}S]} 10 2 + 77.788 0.0 0.0 7.0678 7.0678 93.965 0.0 0.0 0.0 37.74350030035414 9.569940744530356 9.569940744530356 16.479151890078597 0 2.888210492164445 1.3010299956639813 0.3807196863200844 0.3494850021680094 VG{I|L}DDN{I|L}R{[TV]|[{I|L}S]};VT[PS]DN{I|L}R{[TV]|[{I|L}S]};VG{I|L}D[{I|L}A][WQ]{[TV]|[{I|L}S]};V{[RE]|[WV]}DN{I|L}R{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}GV[HV][KS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[R{I|L}][{M(Oxidation (M))|F}E]Y 7.0678;5.5705;4.1027;3.6861;0.025215;0.014078 -;-;-;-;-;- 536 + 1 1.756 85392.7 1.0 929 4857 5784 SUDHL4_400M_050219_2,5788 SUDHL4_400M_050219_2,5788,RLDDNIRTV True True RLDDNIRTV 27.729012 551.303759753704 740027.5 5784.0 nc|ENSG00000141252|Q5VIR6-2|VPS53;;ENSG00000141252|ENST00000437048|VPS53;;nc|ENSG00000141252|Q5VIR6-3|VPS53;;ENST00000575207.5_1_17:560762-617949:-|nuORF;;nc|ENSG00000141252|Q5VIR6-1|VPS53 6.890502452850342 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5790 27.736 262.0 260090.0 25 0 19922.0 + 41307 VPHTRPVSL 9 80 503.2956380395608 1004.5767231459216 2 503.2952758669853 MULTI CID FTMS 0 0 0 5789 135904.96875 0.0777197375181889 17 -0.4035224914550781 1 Unmodified _VPHTRPVSL_ ENST00000412609.5_1_19:40170059-40174276:+|nuORF 27.628801355627647 0.1796483985696185 6 VPHT 4 5 58.972 0.0 0.0 5.8704 0.0 0.0 0.0 567.3253878229124 567.3253878229124 48.88357838612024 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.8494850021680094 0.0 + VPHT 5.8704 + + 27 + 1 1.756 59241.0 1.0 930 4858 5789 SUDHL4_400M_050219_2,5790 SUDHL4_400M_050219_2,5790,VPHTRPVSL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5791 27.743 366.0 222590.0 25 0 19434.0 + 37431 TLDEKIEKV 9 91 358.8727199281887 1073.596330384766 3 358.8724243044853 MULTI CID FTMS 0 0 0 5789 101338.5234375 0.713239467380808 -1 0.024078369140625 2 Unmodified _TLDEKIEKV_ ENSG00000124228|ENST00000618172|DDX27;ENST00000484427.5_1_20:47835892-47850293:+|nuORF;nc|ENSG00000124228|Q96GQ7|DDX27 16.565877749689598 0.3882643987948875 6 [{I|L}T]VDGT{[QN]|[E{I|L}]|[KN]}KV 10 3 + 36.889 0.0 0.0 3.4361 3.4361 81.245 0.0 0.0 0.0 25.295540574256776 0.647124887093824 0.647124887093824 9.731975075880328 0 0.5796896906561032 2.0 0.0 0.0 [{I|L}T]VDGT{[QN]|[E{I|L}]|[KN]}KV;[{I|L}T]WW{[QN]|[E{I|L}]|[KN]}KV;[{I|L}T]V{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[RD]PV;[{I|L}T]VHHK[SG]PV;[{I|L}T][RD]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VPV;[{I|L}T][SG]KHHVPV 3.4361;2.5296;2.1236;2.1089;1.778;1.7632 -;-;-;-;-;- 100 + 1 1.756 71507.9 1.0 931 4858 5789 SUDHL4_400M_050219_2,5791 SUDHL4_400M_050219_2,5791,TLDEKIEKV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5792 27.746 177.0 225930.0 25 0 17947.0 + 11718 GLHSVAEGV 9 70 434.7299854930655 867.445418052931 2 434.7295104861259 MULTI CID FTMS 0 0 0 5789 191053.90625 0.9272013358730148 1 -0.0380077362060546 3 Unmodified _GLHSVAEGV_ ENSG00000117174|ENST00000370574|ZNHIT6;nc|ENSG00000117174|Q9NWK9-2|ZNHIT6 24.67388899826682 0.2172451872415813 6 [VG][HT]{[VA]|[{I|L}G]}EGV 9 2 [VG][HT]{[VA]|[{I|L}G]}E + + 16.198 12.794 1.8452 1.8673 1.8673 50.283 0.0 0.0 0.0 0.0 -8.111206103324733 -8.111206103324733 0.0 0 0.0 0.0 0.0 0.0 [VG][HT]{[VA]|[{I|L}G]}EGV 1.8673 - 48 + 1 1.756 40329.8 1.0 932 4858 5789 SUDHL4_400M_050219_2,5792 SUDHL4_400M_050219_2,5792,GLHSVAEGV False True GLHSVAEGV 27.746431 434.729510486126 908506.0625 5789.0 nc|ENSG00000117174|Q9NWK9-2|ZNHIT6;;ENSG00000117174|ENST00000370574|ZNHIT6 5.340073903401692 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5793 27.76 800.0 106060.0 25 0 9751.6 -1 ECKECRKCFYQ 11 93 775.8286053352747 1549.6426577373493 2 775.8290893435478 MULTI CID FTMS 0 0 0 5789 102952.875 0.775065349613078 -1 0.024078369140625 4 2 Carbamidomethyl (C) _EC(Carbamidomethyl (C))KEC(Carbamidomethyl (C))RKCFYQ_ ENSG00000175395|ENST00000302609|ZNF25;nc|ENSG00000175395|P17030-2|ZNF25 26.268140514670165 0.4754186812857754 6 {M(Oxidation (M))|F}ADQQAE[{M(Oxidation (M))|F}T]GQ 11 -1 82.128 0.0 0.0 5.2998 0.0 0.0 309.1328611017012 0.0 309.1328611017012 0.0 70.13814930688187 0.0 0.0 0 0.5 0.0 1.1237125054200234 1.360924374808178 {M(Oxidation (M))|F}ADQQAE[{M(Oxidation (M))|F}T]GQ 5.2998 - 3131 + 1 1.756 65489.6 0.4399999976158142 933 4858 5789 SUDHL4_400M_050219_2,5793 SUDHL4_400M_050219_2,5793,ECKECRKCFYQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5794 27.767 375.0 90484.0 25 0 13663.0 + 15861 ISNPPGSNL 9 63 449.7342658769242 897.4539788206484 2 449.7344543337822 MULTI CID FTMS 0 0 0 5789 87455.140625 0.8329084561399801 -5 0.11614990234375 5 Unmodified _ISNPPGSNL_ ENSG00000060237|ENST00000315939|WNK1;ENST00000540885.1_1_12:1016996-1017955:+|nuORF;nc|ENSG00000060237|Q9H4A3-2|WNK1;nc|ENSG00000060237|Q9H4A3-4|WNK1;nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1 17.11289562659939 0.3734572693229295 6 {I|L} 1 8 13.979 0.0 0.0 1.5577 0.0 0.0 766.3591587296313 0.0 766.3591587296313 0.0 3.701813447471221 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5577 + + 31 + 1 1.756 34409.2 1.0 934 4858 5789 SUDHL4_400M_050219_2,5794 SUDHL4_400M_050219_2,5794,ISNPPGSNL False True ISNPPGSNL 27.767014 449.734454333782 1024529.0625 5789.0 nc|ENSG00000060237|Q9H4A3-6|WNK1;;nc|ENSG00000060237|Q9H4A3-4|WNK1;;nc|ENSG00000060237|Q9H4A3-5|WNK1;;nc|ENSG00000060237|Q9H4A3-7|WNK1;;ENSG00000060237|ENST00000315939|WNK1;;nc|ENSG00000060237|Q9H4A3-2|WNK1;;ENST00000540885.1_1_12:1016996-1017955:+|nuORF 1.101452757914861 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5797 27.777 146.0 406800.0 25 0 39888.0 + 1678 ALPDQGIAKA 10 88 492.2794740833976 982.5443952335952 2 492.2797119021416 MULTI CID FTMS 0 0 0 5796 224673.203125 0.8625503361341009 3 -0.0967674255371093 1 Unmodified _ALPDQGIAKA_ ENSG00000089289|ENST00000356413|IGBP1 29.84058131909904 0.2982332456971691 6 [{I|L}A]PDQG{I|L}AKA 10 0 + 44.434 0.0 0.0 4.5223 4.5223 82.227 0.0 0.0 0.0 12.98455006504028 3.631995628241 3.631995628241 9.164539485499247 0 0.6237125054200234 2.0 0.0 0.3494850021680094 + + [{I|L}A]PDQG{I|L}AKA;[{I|L}A]PD[AG]G{I|L}AKA;[{I|L}A]PDQ[Q{I|L}]KA;[{I|L}A]PD[AG][Q{I|L}]KA;[DP]QGRR[RV];[{I|L}A]PRR{[WN]|[YH]}A;[DP][AG]GRR[RV] 4.5223;3.5896;3.5784;2.6412;1.7779;1.6423;0.8352 +;-;-;-;-;-;- + 387 + 1 1.756 49969.4 1.0 935 4860 5796 SUDHL4_400M_050219_2,5797 SUDHL4_400M_050219_2,5797,ALPDQGIAKA False True ALPDQGIAKA 27.776532 492.279711902142 1286984.5 5796.0 ENSG00000089289|ENST00000356413|IGBP1 4.259535630544026 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5798 27.79 800.0 303850.0 25 0 47456.0 + -1 TPYCFCKAC 9 134 546.7193531406645 1091.4241533481288 2 546.7194702029228 MULTI CID FTMS 0 0 0 5796 135603.765625 0.1922282656124647 -1 0.0040435791015625 2 Carbamidomethyl (C) _TPYC(Carbamidomethyl (C))FCKAC_ REV__ENSG00000162063|ENST00000397066|CCNF;REV__ENST00000569093.1_1_16:2479482-2485933:+|nuORF 10.823927491677226 0.5436922275383211 6 YTP 3 -1 26.44 0.0 0.0 2.4225 0.0 0.0 0.0 727.2376352550705 727.2376352550705 1.378946235899008 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 YTP 2.4225 - 544 + 1 1.756 183358.9 0.6200000047683716 936 4860 5796 SUDHL4_400M_050219_2,5798 SUDHL4_400M_050219_2,5798,TPYCFCKAC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5799 27.804 800.0 226740.0 25 0 17625.0 -1 EPCCVPDKM 9 146 539.7228464589582 1077.4311399847163 2 539.7225219607353 MULTI CID FTMS 0 0 0 5796 95829.0 0.3112510360560707 -5 0.1050777435302734 3 Carbamidomethyl (C) _EPC(Carbamidomethyl (C))CVPDKM_ ENSG00000266524|ENST00000580279|GDF10 12.531546534597751 0.4974689918368763 6 {[QG]|[NA]}Y[WP]PY 7 -1 23.733 0.0 0.0 2.2027 0.0 0.0 0.0 183.0255000683273 183.0255000683273 3.9418037392537286 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 1.0 {[QG]|[NA]}Y[WP]PY 2.2027 - 1539 1 1.756 138759.1 0.5199999809265137 937 4860 5796 SUDHL4_400M_050219_2,5799 SUDHL4_400M_050219_2,5799,EPCCVPDKM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5801 27.812 314.0 195310.0 25 0 26484.0 + 26242 NQKPPSAEF 9 88 509.25335457746974 1016.4921562217396 2 509.2532836794853 MULTI CID FTMS 0 0 0 5800 150929.515625 0.805460561030457 7 -0.2280693054199218 1 Unmodified _NQKPPSAEF_ ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST;nc|ENSG00000151914|Q03001|DST 19.256988751693697 0.3154191944385105 6 {[ET]|[MV]}[HN][Q{I|L}]E{M(Oxidation (M))|F} 8 7 {[ET]|[MV]}[HN][Q{I|L}]E + + 16.99 -9.9785 -1.172 1.6714 1.6714 50.126 0.0 0.0 0.0 0.0 -4.257593903009607 -4.257593903009607 0.0 0 0.0 0.0 0.0 0.0 {[ET]|[MV]}[HN][Q{I|L}]E{M(Oxidation (M))|F} 1.6714 - 83 + 1 1.756 52267.2 1.0 938 4861 5800 SUDHL4_400M_050219_2,5801 SUDHL4_400M_050219_2,5801,NQKPPSAEF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5802 27.815 94.0 445880.0 25 0 46514.0 + -1 ANYHVLCPC 9 72 538.7360806954147 1075.4576084576292 2 538.7364379763603 MULTI CID FTMS 0 0 0 5800 507336.03125 0.5775749579895433 -3 0.0752124786376953 2 Carbamidomethyl (C) _ANYHVLC(Carbamidomethyl (C))PC_ REV__ENSG00000183128|ENST00000369783|CALHM3 18.13498045792455 0.3457906370836843 6 {[QG]|[NA]}YP 4 -1 28.734 0.0 0.0 2.6718 0.0 0.0 0.0 627.2432584422573 627.2432584422573 15.545970543767124 0.0 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.7134679910804405 {[QG]|[NA]}YP 2.6718 - 262 1 1.756 34664.1 1.0 939 4861 5800 SUDHL4_400M_050219_2,5802 SUDHL4_400M_050219_2,5802,ANYHVLCPC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5803 27.826 635.0 142550.0 25 0 18533.0 + 31147 RLPDDDPTAV 10 102 549.7749461826226 1097.535339432045 2 549.7749511599541 MULTI CID FTMS 0 0 0 5800 140910.765625 0.1021544241756182 -8 0.1913623809814453 3 Unmodified _RLPDDDPTAV_ ENSG00000158623|ENST00000425248|COPG2 59.012897905743536 0.0391755228671419 6 [R{I|L}][DP]DDPTAV 10 0 + 69.927 0.0 0.0 6.3712 6.3712 88.081 0.0 0.0 0.0 8.066884185923655 53.47295930833134 8.066884185923655 9.030899869919438 0 1.5 0.0 1.3494850021680094 0.3807196863200844 + + [R{I|L}][DP]DDPTAV;[QP][KQ]DDPTAV;[R{I|L}][DP]DDPG[{I|L}T];{[ES]|[DT]|[{I|L}C]}{[RE]|[WV]}D[RH]AV;[QP][KQ]DDPG[{I|L}T];[R{I|L}][DP]DD{[VA]|[{I|L}G]}[TP];[QP][KQ]DD{[VA]|[{I|L}G]}[TP];[TP][HN]V[WM][{I|L}T] 6.3712;5.5484;3.3438;2.5517;2.521;2.1683;1.3454;0.0080847 +;-;-;-;-;-;-;- + 243 1 1.756 78712.9 1.0 940 4861 5800 SUDHL4_400M_050219_2,5803 SUDHL4_400M_050219_2,5803,RLPDDDPTAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5804 27.832 375.0 318700.0 25 0 45308.0 36921 TESYSVPQRGG 11 116 394.1930192665805 1179.5572283999416 3 394.1947509646416 MULTI CID FTMS 0 0 0 5800 148848.125 0.6619060764401923 -1 0.0331611633300781 4 Unmodified _TESYSVPQRGG_ ENST00000372876.1_1_6:42712424-42712766:-|nuORF 26.120906184454547 0.478875788770541 6 TESYSYKR{M(Oxidation (M))|F} 9 5 + 88.44 0.0 0.0 7.4977 7.4977 86.521 0.0 0.0 0.0 77.02004826910782 6.382805414149786 6.382805414149786 3.4948500216800937 0 0.5994850021680094 1.5228787452803376 0.9247425010840048 0.7614393726401688 TESYSYKR{M(Oxidation (M))|F};TE{M(Oxidation (M))|F}CSYKR{M(Oxidation (M))|F};TE[HM][MT]KR{M(Oxidation (M))|F};TESRR[DN]R{M(Oxidation (M))|F};[{I|L}V][WH]{M(Oxidation (M))|F}CQ{M(Oxidation (M))|F}T;[{I|L}V][WH]{M(Oxidation (M))|F}CK{M(Oxidation (M))|F}T;[Y{I|L}][Y{I|L}]{M(Oxidation (M))|F}YSDP;[{I|L}V]Y[YG]SCK{M(Oxidation (M))|F}T;[Y{I|L}][Y{I|L}]E[MT]{M(Oxidation (M))|F}T;[Y{I|L}][YR]SCQ{M(Oxidation (M))|F}T 7.4977;7.2014;3.2718;3.2307;1.6317;1.6317;1.5398;1.2706;0.5359;0.42279 -;-;-;-;-;-;-;-;-;- 269 + 1 1.756 101929.4 1.0 941 4861 5800 SUDHL4_400M_050219_2,5804 SUDHL4_400M_050219_2,5804,TESYSVPQRGG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5806 27.84 294.0 156700.0 25 0 12921.0 -1 GQCMAAGCDHV 11 96 554.2022432543032 1106.3899335754063 2 554.2017089724541 MULTI CID FTMS 0 0 0 5805 174094.28125 0.6868937835624144 -2 0.0612640380859375 1 Oxidation (M) _GQCM(Oxidation (M))AAGCDHV_ ENSG00000173157|ENST00000389420|ADAMTS20;nc|ENSG00000173157|P59510|ADAMTS20 5.731851221503515 0.8481046878870278 6 {[QG]|[NA]}P 3 -1 9.6214 0.0 0.0 0.86962 0.0 0.0 0.0 821.2296607084719 821.2296607084719 9.13689046268914 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 {[QG]|[NA]}P 0.86962 - 72 1 1.756 39224.6 1.0 942 4862 5805 SUDHL4_400M_050219_2,5806 SUDHL4_400M_050219_2,5806,GQCMAAGCDHV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5807 27.854 800.0 194030.0 25 0 57087.0 + 31461 RPRGPEGVGSL 11 94 562.8119715510192 1123.6093901688382 2 562.8123046755791 MULTI CID FTMS 0 0 0 5805 126105.6953125 0.1461636720862958 -5 0.1273937225341797 2 Unmodified _RPRGPEGVGSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 47.05281240577143 0.1339515440072066 6 {I|L}S 2 10 34.923 0.0 0.0 3.1081 0.0 0.0 0.0 920.473301649992 920.473301649992 -2.5532655417366428 0.0 -2.5532655417366428 0.0 0 0.3252574989159953 0.7958800173440752 0.4247425010840047 0.0 {I|L}S 3.1081 - 217 + 1 1.756 122054.0 0.5600000023841858 943 4862 5805 SUDHL4_400M_050219_2,5807 SUDHL4_400M_050219_2,5807,RPRGPEGVGSL False True RPRGPEGVGSL 27.854115 562.812304675579 20305924.0 5805.0 ENST00000523767.5_1_5:149877380-149900454:+|nuORF 8.427752335866293 2.0 True 11.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5808 27.868 800.0 108730.0 25 0 12434.0 + 8948 FAMNDESVFY 10 97 611.7594603353967 1221.5043677375934 2 611.7598144412041 MULTI CID FTMS 0 0 0 5805 114065.9296875 0.9904943218567438 -2 0.0612640380859375 3 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 32.30548876998284 0.2428506522065767 6 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 84.747 0.0 0.0 6.9379 6.9379 90.111 0.0 0.0 0.0 4.884381005764311 62.80537307494454 4.884381005764311 9.164539485499262 0 1.0 0.0 0.8882104921644451 1.25 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[TP][NS]NQDH{M(Oxidation (M))|F}Y;[TP][WE]QDH{M(Oxidation (M))|F}Y;[PG]{[CP]|[EA]}[EP]QNA{M(Oxidation (M))|F}Y 6.9379;6.1877;6.1877;6.1877;5.4403;5.4403;5.4403;4.3089;3.5079;3.4909 -;-;-;-;-;-;-;-;-;- 535 1 1.756 68796.2 0.5400000214576721 944 4862 5805 SUDHL4_400M_050219_2,5808 SUDHL4_400M_050219_2,5808,FAMNDESVFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5810 27.886 800.0 79796.0 25 0 4396.3 -1 0 98 636.2611356989164 2541.015436929265 4 636.5121948122978 MULTI CID FTMS 0 0 0 5809 119228.03125 1.0 0 0.0 1 6 EDTEEVEH 8 -1 79.648 0.0 0.0 3.1345 0.0 0.0 0.0 1569.6183775551112 1569.6183775551112 65.93739764051705 0.0 0.0 0.0 0 1.055462187404089 0.7958800173440752 0.4247425010840047 0.0 EDTEEVEH 3.1345 - 983 + 1 1.756 55337.6 0.4799999892711639 945 4863 5809 SUDHL4_400M_050219_2,5810 SUDHL4_400M_050219_2,5810, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5811 27.888 84.0 969580.0 25 0 113400.0 22720 LQHKENRSL 9 80 375.5434512485391 1123.6085243458174 3 375.5435058474541 MULTI CID FTMS 0 0 0 5809 514262.25 0.2804241351500349 -5 0.1388187408447265 2 Unmodified _LQHKENRSL_ ENSG00000135436|ENST00000257894|FAM186B;ENST00000533372.1_1_12:49976813-49999059:-|nuORF;nc|ENSG00000135436|Q8IYM0-2|FAM186B 26.020703789607367 0.2001090068861241 6 GVGS{I|L} 5 7 44.24 0.0 0.0 3.9373 0.0 0.0 692.3722307402617 0.0 692.3722307402617 0.0 29.547509540478032 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 0.0 GVGS{I|L} 3.9373 - 188 1 1.756 69487.1 1.0 946 4863 5809 SUDHL4_400M_050219_2,5811 SUDHL4_400M_050219_2,5811,LQHKENRSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5812 27.901 800.0 86014.0 25 0 4763.7 -1 RWSWCRWWWTE 11 105 580.2608863500108 1737.7608296502322 3 580.2595703005791 MULTI CID FTMS 0 0 0 5809 92195.890625 0.8601635473998092 -4 0.1008110046386718 3 Carbamidomethyl (C) _RWSWC(Carbamidomethyl (C))RWWWTE_ ENST00000348956.6_1_14:103986274-103986647:-|nuORF 0.0 0.8751479354844584 6 Y 1 -1 13.495 0.0 0.0 0.77657 0.0 0.0 1556.6864105601917 0.0 1556.6864105601917 0.0 0.3072623954359681 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.77657 - 172 + 1 1.756 57530.6 0.4799999892711639 947 4863 5809 SUDHL4_400M_050219_2,5812 SUDHL4_400M_050219_2,5812,RWSWCRWWWTE False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5813 27.915 800.0 179130.0 25 0 43784.0 -1 0 58 1188.8161605331093 3563.426652199528 3 1189.149707019329 MULTI CID FTMS 0 0 0 5809 203546.734375 0.372256198168568 -3 0.0967674255371093 4 6 E 1 -1 6.9897 0.0 0.0 0.19615 0.0 0.0 2907.1982242879017 524.1641335474817 3431.362357835384 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19615 - 17 + 1 1.756 118208.5 0.5299999713897705 948 4863 5809 SUDHL4_400M_050219_2,5813 SUDHL4_400M_050219_2,5813, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5815 27.92 78.0 645630.0 25 0 34283.0 + 36912 TESLSGCPEEK 11 70 590.2656087709605 1178.516664608721 2 590.2661620974541 MULTI CID FTMS 0 0 0 5814 680134.4375 0.4932203314546924 3 -0.0883216857910156 1 Unmodified _TESLSGCPEEK_ REV__ENSG00000188895|ENST00000398532|MSL1;REV__nc|ENSG00000188895|Q68DK7-2|MSL1;REV__nc|ENSG00000188895|Q68DK7-3|MSL1 20.41453444215458 0.6105011870913812 6 HVDAAEK 7 -1 66.011 0.0 0.0 5.6012 0.0 0.0 410.1385226552724 0.0 410.1385226552724 0.0 49.81298874902095 0.0 0.0 0 2.774227503252014 0.0 0.3807196863200844 0.3807196863200844 HVDAAEK 5.6012 - 142 + 1 1.756 45739.3 1.0 949 4864 5814 SUDHL4_400M_050219_2,5815 SUDHL4_400M_050219_2,5815,TESLSGCPEEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5816 27.929 522.0 124820.0 25 0 7045.3 + -1 GVVTDMFTAI 10 108 535.2672363000411 1068.519919666882 2 535.2660400271416 MULTI CID FTMS 0 0 0 5814 110948.9921875 0.0091559984372767 31 -0.7932682037353516 2 Oxidation (M) _GVVTDM(Oxidation (M))FTAI_ REV__ENSG00000164659|ENST00000450689|ELAPOR2 26.88365393820708 0.3646707531412818 6 EDT[WK]A{I|L} 7 -1 49.416 0.0 0.0 4.6247 0.0 0.0 207.08408089910705 0.0 207.08408089910705 0.0 21.50205285828573 0.0 0.0 0 1.947621246364342 0.0 0.75 0.0 EDT[WK]A{I|L} 4.6247 - 298 + 1 1.756 55817.7 1.0 950 4864 5814 SUDHL4_400M_050219_2,5816 SUDHL4_400M_050219_2,5816,GVVTDMFTAI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5818 27.934 2.4 16288000.0 25 0 1898400.0 + 12254 GQYPTQPTY 9 65 527.7454733714261 1053.476393809652 2 527.7462036013603 MULTI CID FTMS 0 0 0 5817 23699912.0 0.9137585325893384 1 -0.0505218505859375 1 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 36.12702656103203 0.0967173616627612 6 [TP]QY 4 5 35.974 0.0 0.0 3.4148 0.0 0.0 0.0 561.2307473856064 561.2307473856064 10.7521226932964 0.0 0.0 0.0 0 0.0 1.154901959985743 0.6989700043360187 0.4247425010840047 [TP]QY 3.4148 - 132 1 1.756 37511.7 1.0 951 4865 5817 SUDHL4_400M_050219_2,5818 SUDHL4_400M_050219_2,5818,GQYPTQPTY True True GQYPTQPTY 27.933661 527.74620360136 536832096.0 5817.0 nc|ENSG00000183283|Q15038-2|DAZAP2;;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;;nc|ENSG00000183283|Q15038-3|DAZAP2;;nc|ENSG00000183283|Q15038-6|DAZAP2;;ENSG00000183283|ENST00000412716|DAZAP2;;nc|ENSG00000183283|Q15038-4|DAZAP2;;nc|ENSG00000183283|Q15038-5|DAZAP2;;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;;ENST00000552173.5_1_12:51632691-51634513:+|nuORF 8.42877689997355 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5819 27.942 464.0 180750.0 25 0 18253.0 -1 YTMDPRTPFDY 11 108 711.307027320259 1420.5995017073178 2 711.3076049685478 MULTI CID FTMS 0 0 0 5817 187118.84375 0.4540731734025092 -1 0.0138473510742187 2 Oxidation (M) _YTM(Oxidation (M))DPRTPFDY_ ENSG00000173531|ENST00000449682|MST1;ENST00000442552.7_1_1:17085068-17087541:-|nuORF;ENST00000492329.5_1_3:49721463-49723185:-|nuORF;nc|ENSG00000173531|P26927|MST1;nc|ENSG00000186715|Q2TV78-2|MST1L;nc|ENSG00000186715|Q2TV78|MST1L 13.042465956692816 0.7638483625850725 6 [QA]HDEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 83.634 0.0 0.0 5.8872 5.8872 80.149 0.0 0.0 0.0 7.32422989229147 54.11701590364441 7.32422989229147 1.808901419374493 0 1.218765315847925 0.0 0.6694451763165201 1.5189301784845295 [QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAGAQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAGANQA{M(Oxidation (M))|F}Y;[QA]HDEQAQNA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;[HD][QA]EAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAGAQGGA{M(Oxidation (M))|F}Y;[QA]HDEAGA[AG]NA{M(Oxidation (M))|F}Y 5.8872;5.7599;5.6753;5.548;5.2924;5.2468;5.2468;5.2117;5.1213;5.1213 -;-;-;-;-;-;-;-;-;- 5923 1 1.756 62350.3 1.0 952 4865 5817 SUDHL4_400M_050219_2,5819 SUDHL4_400M_050219_2,5819,YTMDPRTPFDY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5820 27.952 564.0 101880.0 25 0 7978.6 3153 AVSADKPDSV 10 107 494.7510080711424 0 494.7510253787041 PEAK CID FTMS 0 0 0 5817 123383.0 1.0 0 0.0 3 Unmodified _AVSADKPDSV_ ENSG00000111877|ENST00000619706|MCM9;nc|ENSG00000111877|Q9NXL9-4|MCM9 25.399314129420983 0.2547831343944559 6 DQD 3 8 14.48 0.0 0.0 1.4663 0.0 0.0 544.2857247831066 82.06702600650624 626.3527507896129 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.2614393726401688 0.2396518287104437 DQD 1.4663 - 119 + 1 1.756 47525.1 1.0 953 4865 5817 SUDHL4_400M_050219_2,5820 SUDHL4_400M_050219_2,5820,AVSADKPDSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5821 27.966 800.0 53103.0 25 0 7884.6 -1 0 62 629.8580159090571 3144.2536972122853 5 630.2587158083916 MULTI CID FTMS 0 0 0 5817 94640.3828125 0.9880889060431408 2 -0.0744743347167968 4 6 EDT{M(Oxidation (M))|F} 4 -1 32.18 0.0 0.0 1.0235 0.0 0.0 0.0 2649.062846551376 2649.062846551376 27.57638152291939 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 EDT{M(Oxidation (M))|F} 1.0235 - 29 + 1 1.756 40772.8 0.4900000095367431 954 4865 5817 SUDHL4_400M_050219_2,5821 SUDHL4_400M_050219_2,5821, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5822 27.979 800.0 97361.0 25 0 11647.0 -1 0 89 567.9900279629471 1700.9482544890411 3 568.3239623904228 MULTI CID FTMS 0 0 0 5817 76647.375 1.0 0 0.0 5 6 [EP]APP 5 -1 34.961 0.0 0.0 2.0554 0.0 0.0 0.0 1206.6859555634876 1206.6859555634876 21.46591250700361 0.0 0.0 0.0 0 0.2742275032520141 1.0 0.0 0.0 [EP]APP 2.0554 - 92 + 1 1.756 63115.4 0.4699999988079071 955 4865 5817 SUDHL4_400M_050219_2,5822 SUDHL4_400M_050219_2,5822, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5824 27.984 122.0 375260.0 25 0 48198.0 10874 GAEVELSAPV 10 75 486.25483819911295 970.495123465026 2 486.2551147341728 MULTI CID FTMS 0 0 0 5823 382371.25 0.6914429758514733 7 -0.1327056884765625 1 Unmodified _GAEVELSAPV_ ENSG00000169169|ENST00000598293|CPT1C;ENST00000295404.9_1_19:50194996-50204826:+|nuORF;ENST00000599023.5_1_19:50195509-50213852:+|nuORF;ENST00000600944.5_1_19:50195509-50200723:+|nuORF;nc|ENSG00000169169|Q8TCG5-2|CPT1C;nc|ENSG00000169169|Q8TCG5-3|CPT1C 20.453626601364224 0.5043500229302764 6 [{I|L}T][C(Carbamidomethyl (C))H]Q 5 9 27.517 0.0 0.0 2.8353 0.0 0.0 0.0 328.18401099413774 328.18401099413774 12.03234439706371 0.0 0.0 0.0 0 0.5 2.0 0.75 0.0 [{I|L}T][C(Carbamidomethyl (C))H]Q 2.8353 - 38 1 1.756 41725.1 1.0 956 4866 5823 SUDHL4_400M_050219_2,5824 SUDHL4_400M_050219_2,5824,GAEVELSAPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5825 27.987 131.0 470950.0 25 0 58029.0 + 2138 APVPAPERK 9 71 482.7823089440374 963.5500649548748 2 482.7821533083916 MULTI CID FTMS 0 0 0 5823 489116.78125 0.945895465674906 -5 0.1751670837402343 2 Unmodified _APVPAPERK_ REV__ENSG00000134323|ENST00000281043|MYCN 25.399314129420983 0.2080152500878129 6 APAPV 5 -1 69.196 0.0 0.0 7.1814 0.0 0.0 0.0 525.2796793882313 525.2796793882313 46.26410021363377 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.0 0.0 APAPV 7.1814 - 49 + 1 1.756 51460.6 1.0 957 4866 5823 SUDHL4_400M_050219_2,5825 SUDHL4_400M_050219_2,5825,APVPAPERK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5826 27.991 191.0 283000.0 25 0 24162.0 + 32171 RVSPDGTAF 9 85 475.2405768250894 948.4666007169787 2 475.2403137087822 MULTI CID FTMS 0 0 0 5823 157161.859375 0.3971463577000921 -4 0.147064208984375 3 Unmodified _RVSPDGTAF_ ENSG00000069966|ENST00000261837|GNB5;nc|ENSG00000069966|O14775-2|GNB5;nc|ENSG00000069966|O14775-3|GNB5 20.41453444215458 0.284085796332423 6 GTA{M(Oxidation (M))|F} 4 5 46.186 0.0 0.0 4.8695 0.0 0.0 554.2835324666546 0.0 554.2835324666546 0.0 26.00833760139686 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 + GTA{M(Oxidation (M))|F} 4.8695 + + 53 1 1.756 46549.0 1.0 958 4866 5823 SUDHL4_400M_050219_2,5826 SUDHL4_400M_050219_2,5826,RVSPDGTAF False True RVSPDGTAF 27.990767 475.240313708782 1859172.375 5823.0 nc|ENSG00000069966|O14775-2|GNB5;;ENSG00000069966|ENST00000261837|GNB5;;nc|ENSG00000069966|O14775-3|GNB5 6.796857515970866 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5827 28.003 726.0 197070.0 25 0 32488.0 + 14850 ILGPKPQGV 9 124 454.7817573017615 907.548961670323 2 454.7813598513603 MULTI CID FTMS 0 0 0 5823 145337.40625 0.988018032381681 -1 0.0505218505859375 4 Unmodified _ILGPKPQGV_ ENSG00000164073|ENST00000641686|MFSD8 50.855029805455786 0.0384952370514206 6 {I|L}{I|L}GPKSS 7 4 67.745 0.0 0.0 7.4646 0.0 0.0 0.0 222.12494836978752 222.12494836978752 54.89146369165354 0.0 0.0 0.0 0 0.805462187404089 2.0 0.6989700043360187 0.3807196863200844 {I|L}{I|L}GPKSS 7.4646 - 541 + 1 1.756 114740.7 1.0 959 4866 5823 SUDHL4_400M_050219_2,5827 SUDHL4_400M_050219_2,5827,ILGPKPQGV True True ILGPKPQGV 28.003354 454.78135985136 711686.1875 5823.0 ENSG00000164073|ENST00000641686|MFSD8 5.843565464019775 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5829 28.021 800.0 81944.0 25 0 8428.8 + 23964 LVSEYQQYQD 10 109 636.7903657765041 1271.5661786198082 2 636.7910034060478 MULTI CID FTMS 0 0 0 5828 91635.546875 0.8449425727773231 1 -0.0289497375488281 1 Unmodified _LVSEYQQYQD_ ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000137267|ENST00000333628|TUBB2A;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000176014|ENST00000317702|TUBB6;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000196230|ENST00000327892|TUBB;ENSG00000258947|ENST00000315491|TUBB3;ENSG00000261456|ENST00000568584|TUBB8;ENST00000290377.9_1_9:141071128-141071713:+|nuORF;ENST00000402141.1_1_6:143757385-143757844:+|nuORF;ENST00000415481.1_1_1:809210-809726:+|nuORF;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;ENST00000427668.1_1_1:53461605-53461695:+|nuORF;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3 63.960520009940105 0.0261970246776379 6 [{I|L}V]SEYQQ 7 3 34.461 0.0 0.0 2.7102 0.0 0.0 0.0 421.1336840685957 421.1336840685957 5.887439872573765 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.7742275032520141 0.0 + [{I|L}V]SEYQQ 2.7102 + + 716 1 1.756 55965.6 0.5199999809265137 960 4867 5828 SUDHL4_400M_050219_2,5829 SUDHL4_400M_050219_2,5829,LVSEYQQYQD True True LVSEYQQYQD 28.021058 636.791003406048 1043687.25 5828.0 ENSG00000261456|ENST00000568584|TUBB8;;ENSG00000137267|ENST00000333628|TUBB2A;;ENST00000604929.1_1_9:140136931-140138005:+|nuORF;;ENSG00000104833|ENST00000264071|TUBB4A;;ENSG00000196230|ENST00000327892|TUBB;;ENST00000427668.1_1_1:53461605-53461695:+|nuORF;;nc|ENSG00000258947|Q13509-2|TUBB3;;ENST00000415481.1_1_1:809210-809726:+|nuORF;;ENSG00000176014|ENST00000317702|TUBB6;;ENSG00000258947|ENST00000315491|TUBB3;;ENST00000518096.1_1_8:30210219-30210855:+|nuORF;;ENSG00000137285|ENST00000259818|TUBB2B;;ENSG00000188229|ENST00000340384|TUBB4B;;ENST00000417736.2_1_18:12308439-12326126:+|nuORF;;ENST00000402141.1_1_6:143757385-143757844:+|nuORF;;ENSG00000173213|ENST00000308911|TUBB8B;;ENST00000290377.9_1_9:141071128-141071713:+|nuORF 7.437461217244466 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5830 28.032 645.0 270090.0 25 0 45849.0 33406 SGVLLLDNY 9 109 497.26563578771726 992.5167186422344 2 497.2653991580009 MULTI CID FTMS 0 0 0 5828 134414.390625 1.0 0 0.0 2 Unmodified _SGVLLLDNY_ ENSG00000065989|ENST00000380702|PDE4A;ENSG00000113448|ENST00000340635|PDE4D;ENSG00000184588|ENST00000341517|PDE4B;ENST00000483863.2_1_1:66833392-66833766:+|nuORF;ENST00000590407.1_1_19:10569976-10577573:+|nuORF;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-5|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;nc|ENSG00000113448|Q08499-10|PDE4D;nc|ENSG00000113448|Q08499-11|PDE4D;nc|ENSG00000113448|Q08499-2|PDE4D;nc|ENSG00000113448|Q08499-3|PDE4D;nc|ENSG00000113448|Q08499-4|PDE4D;nc|ENSG00000113448|Q08499-5|PDE4D;nc|ENSG00000113448|Q08499-6|PDE4D;nc|ENSG00000113448|Q08499-8|PDE4D;nc|ENSG00000113448|Q08499-9|PDE4D;nc|ENSG00000184588|Q07343-2|PDE4B;nc|ENSG00000184588|Q07343-3|PDE4B;nc|ENSG00000184588|Q07343-4|PDE4B 19.256988751693697 0.3154191944385105 6 SGVG[WP]RP 8 6 40.73 0.0 0.0 4.1037 0.0 0.0 0.0 153.07869898013908 153.07869898013908 19.760715993851434 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 1.4802046884880935 SGVG[WP]RP 4.1037 - 301 + 1 1.756 136947.0 1.0 961 4867 5828 SUDHL4_400M_050219_2,5830 SUDHL4_400M_050219_2,5830,SGVLLLDNY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5832 28.044 533.0 521860.0 25 0 89653.0 -1 GQYMFTDNT 9 116 546.7193531406645 1091.4241533481288 2 546.7189819216728 MULTI CID FTMS 0 0 0 5831 188991.96875 0.2679099522056332 7 -0.1002407073974609 1 Oxidation (M) _GQYM(Oxidation (M))FTDNT_ ENSG00000184374|ENST00000332843|COLEC10 12.240655878213236 0.5053430591993562 6 YTP 3 -1 26.427 0.0 0.0 2.4213 0.0 0.0 0.0 727.2388671028771 727.2388671028771 4.017412290202671 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.0 YTP 2.4213 - 186 + 1 1.756 212456.3 1.0 962 4868 5831 SUDHL4_400M_050219_2,5832 SUDHL4_400M_050219_2,5832,GQYMFTDNT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5833 28.05 335.0 431600.0 25 0 94995.0 + 31963 RVEKNIYR 8 127 539.3124166111753 1076.6102802891503 2 539.3114501833916 MULTI CID FTMS 0 0 0 5831 236786.03125 1.0 0 0.0 2 Unmodified _RVEKNIYR_ REV__ENSG00000122483|ENST00000690025|CCDC18;REV__nc|ENSG00000122483|Q5T9S5|CCDC18 20.41453444215458 0.6093278397249439 6 {[QG]|[NA]}YE 4 -1 24.169 0.0 0.0 2.2449 0.0 0.0 0.0 596.4136609866692 596.4136609866692 3.7679593918845455 0.0 0.0 0.0 0 0.0 1.0 0.0 0.4247425010840047 {[QG]|[NA]}YE 2.2449 - 441 1 1.756 111704.2 1.0 963 4868 5831 SUDHL4_400M_050219_2,5833 SUDHL4_400M_050219_2,5833,RVEKNIYR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5834 28.058 410.0 204770.0 25 0 16027.0 37217 TIIPLMKKDH 10 118 399.23260854447176 1194.6759962336153 3 399.2328063845634 MULTI CID FTMS 0 0 0 5831 135456.21875 0.7792971833036987 -5 0.1644630432128906 3 Unmodified _TIIPLMKKDH_ ENSG00000169710|ENST00000306749|FASN 7.945399516374404 0.6898843699695153 6 TT{I|L}KY[WQ]KK 9 7 + 65.921 0.0 0.0 5.5179 5.5179 88.172 0.0 0.0 0.0 50.12456261857125 0.2853716820872165 0.2853716820872165 10.389180660303694 0 0.75 1.3979400086720375 0.0 0.3807196863200844 TT{I|L}KY[WQ]KK;[VG][YR]{I|L}YK{I|L}[PS];[K{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}YK{I|L}[PS];[VG]{[VA]|[{I|L}G]}[YV]YK{I|L}[PS];[K{I|L}]{[C(Carbamidomethyl (C))G]|[NC]}[RH]K{I|L}[PS] 5.5179;4.6483;3.1777;3.1631;0.78653 -;-;-;-;- 130 + 1 1.756 67606.8 1.0 964 4868 5831 SUDHL4_400M_050219_2,5834 SUDHL4_400M_050219_2,5834,TIIPLMKKDH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5837 28.074 566.0 339360.0 25 0 76064.0 + + 12240 RVNVTGIYR 9 144 538.7360806954147 1075.4576084576292 2 539.2366210818291 MULTI CID FTMS 0 0 0 5836 206169.078125 0.4164317059464351 6 -0.0749530792236328 1 Unmodified _GQYCLCRFS_ ENSG00000104738|ENST00000649973|MCM4 13.042465956692816 0.4836390050082244 6 {[QG]|[NA]}Y 3 -1 29.398 0.0 0.0 2.7335 0.0 0.0 0.0 724.292483295773 724.292483295773 13.02181914718602 0.0 0.0 0.0 0 0.9247425010840048 0.9208187539523752 0.0 0.3494850021680094 {[QG]|[NA]}Y 2.7335 + + 705 1 1.756 153023.3 1.0 965 4870 5836 SUDHL4_400M_050219_2,5837 SUDHL4_400M_050219_2,5837,GQYCLCRFS False False RVNVTGIYR 28.074118 539.236621081829 2212304.25 5836.0 ENSG00000104738|ENST00000649973|MCM4 3.6648048559824624 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5838 28.088 800.0 64711.0 25 0 2906.6 -1 0 69 1000.9104267479614 3999.6126011254455 4 1001.415393054485 MULTI CID FTMS 0 0 0 5836 79860.390625 0.7475757302062609 -5 0.1327705383300781 2 6 ASA 3 -1 15.445 0.0 0.0 0.38617 0.0 0.0 3473.373354333716 294.10984216861567 3767.483196502332 0.0 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 ASA 0.38617 - 183 + 1 1.756 44524.9 0.3700000047683716 966 4870 5836 SUDHL4_400M_050219_2,5838 SUDHL4_400M_050219_2,5838, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5840 28.093 44.0 989060.0 25 0 152170.0 + 31148 RLPDDDPTAV 10 62 549.7749461826226 1097.535339432045 2 549.7747070193291 MULTI CID FTMS 0 0 0 5839 1352649.25 0.9806142535131932 2 -0.0241355895996093 1 Unmodified _RLPDDDPTAV_ ENSG00000158623|ENST00000425248|COPG2 44.94466952835103 0.1098215951422272 6 [R{I|L}][DP]DDPTAV 10 0 + 64.456 0.0 0.0 5.8728 5.8728 90.243 0.0 0.0 0.0 4.259687322722812 58.97099695308839 4.259687322722812 13.534087492996392 0 1.325257498915995 0.0 0.8807196863200843 0.0 + + [R{I|L}][DP]DDPTAV;[TP][WP]{[ET]|[MV]}PTAV;[R{I|L}][DP]DDPG[{I|L}T];{[ES]|[DT]|[{I|L}C]}{[RE]|[WV]}D[RH]AV;[TP][WP]{[ET]|[MV]}PG[{I|L}T];[R{I|L}][DP]DD{[VA]|[{I|L}G]}[TP] 5.8728;4.6396;3.1857;2.6075;1.9526;1.6378 +;-;-;-;-;- + 113 1 1.756 40145.7 1.0 967 4871 5839 SUDHL4_400M_050219_2,5840 SUDHL4_400M_050219_2,5840,RLPDDDPTAV True True RLPDDDPTAV 28.093076 549.774707019329 37601487.0 5839.0 ENSG00000158623|ENST00000425248|COPG2 9.030799865722656 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5841 28.107 800.0 135920.0 25 0 10133.0 + -1 KSMFLCNECC 10 114 674.7620506361268 1347.5095483390537 2 674.7624389529228 MULTI CID FTMS 0 0 0 5839 92880.0703125 0.3076228284250747 -10 0.2837371826171875 2 3 Carbamidomethyl (C) _KSMFLC(Carbamidomethyl (C))NEC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ REV__ENSG00000104755|ENST00000265708|ADAM2;REV__nc|ENSG00000104755|Q99965-2|ADAM2 9.38312468134398 0.6832340498775793 6 [TP]QGQY 6 -1 42.853 0.0 0.0 3.1802 0.0 0.0 0.0 670.1894549154784 670.1894549154784 24.18076008422666 0.0 0.0 0.0 0 0.0 1.0 1.2416440611282626 0.6747425010840047 [TP]QGQY 3.1802 - 1915 1 1.756 81334.8 0.4600000083446502 968 4871 5839 SUDHL4_400M_050219_2,5841 SUDHL4_400M_050219_2,5841,KSMFLCNECC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5843 28.112 125.0 529440.0 25 0 171740.0 + 31462 RPRGPEGVGSL 11 48 562.8119715510192 1123.6093901688382 2 562.8118774294853 MULTI CID FTMS 0 0 0 5842 467153.34375 0.5414572908914719 5 -0.0758953094482421 1 Unmodified _RPRGPEGVGSL_ ENST00000523767.5_1_5:149877380-149900454:+|nuORF 14.170726826480095 0.7403792890213726 6 RP 2 9 24.45 0.0 0.0 2.1761 0.0 0.0 0.0 867.4388521783811 867.4388521783811 10.955612550363796 0.0 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 + RP 2.1761 + + 70 + 1 1.756 60403.1 1.0 969 4872 5842 SUDHL4_400M_050219_2,5843 SUDHL4_400M_050219_2,5843,RPRGPEGVGSL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5846 28.133 800.0 178950.0 25 0 21623.0 + 44147 YLDPAQRGV 9 101 509.7693674528877 1017.5241819725752 2 509.7693054080009 MULTI CID FTMS 0 0 0 5845 85854.1953125 0.0266866333581847 -12 0.2838459014892578 1 Unmodified _YLDPAQRGV_ ENSG00000130731|ENST00000301686|METTL26;ENST00000448973.6_1_16:685849-686290:-|nuORF;nc|ENSG00000130731|Q96S19-2|METTL26;nc|ENSG00000130731|Q96S19-3|METTL26;nc|ENSG00000130731|Q96S19-4|METTL26;nc|ENSG00000130731|Q96S19-5|METTL26;nc|ENSG00000130731|Q96S19-6|METTL26 41.8396318013385 0.0653578398400075 6 Y{I|L}DPAQ 6 3 69.87 0.0 0.0 6.8667 0.0 0.0 0.0 327.17902551822505 327.17902551822505 57.39577516576787 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.4247425010840047 + Y{I|L}DPAQ 6.8667 + + 105 + 1 1.756 115162.6 0.5099999904632568 970 4874 5845 SUDHL4_400M_050219_2,5846 SUDHL4_400M_050219_2,5846,YLDPAQRGV True True YLDPAQRGV 28.132535 509.769305408001 80800816.0 5845.0 nc|ENSG00000130731|Q96S19-2|METTL26;;nc|ENSG00000130731|Q96S19-4|METTL26;;ENSG00000130731|ENST00000301686|METTL26;;ENST00000448973.6_1_16:685849-686290:-|nuORF;;nc|ENSG00000130731|Q96S19-3|METTL26;;nc|ENSG00000130731|Q96S19-5|METTL26;;nc|ENSG00000130731|Q96S19-6|METTL26 7.754093170166016 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5849 28.143 225.0 156200.0 25 0 14825.0 + 26614 NVPWTRTI 8 66 493.7725303487839 0 493.7724182009697 PEAK CID FTMS 0 0 0 5848 146307.796875 1.0 0 0.0 1 Unmodified _NVPWTRTI_ REV__ENSG00000196236|ENST00000357137|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-2|XPNPEP3;REV__nc|ENSG00000196236|Q9NQH7-4|XPNPEP3 18.13498045792455 0.4501116112875982 6 NGV 3 -1 15.78 0.0 0.0 1.6011 0.0 0.0 232.14136089112407 480.2304781549438 712.3718390460679 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 NGV 1.6011 - 62 + 1 1.756 31850.4 1.0 971 4876 5848 SUDHL4_400M_050219_2,5849 SUDHL4_400M_050219_2,5849,NVPWTRTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5850 28.157 800.0 117450.0 25 0 10335.0 + -1 EYRWECMKRYP 11 76 809.3673553555552 1616.7201577779103 2 809.3684570193291 MULTI CID FTMS 0 0 0 5848 56838.73828125 0.5854904743985478 1 -0.0462722778320312 2 Carbamidomethyl (C) _EYRWEC(Carbamidomethyl (C))MKRYP_ REV__ENSG00000165899|ENST00000547103|OTOGL 0.3070304955306653 0.8736993455979228 6 {M(Oxidation (M))|F}ANQQA[C(Carbamidomethyl (C))R]WQ 10 -1 71.988 0.0 0.0 4.4527 0.0 0.0 309.13526933516124 0.0 309.13526933516124 0.0 62.523656471886326 0.0 0.0 0 0.805462187404089 0.0 0.0 1.579689690656103 {M(Oxidation (M))|F}ANQQA[C(Carbamidomethyl (C))R]WQ 4.4527 - 718 + 1 1.756 69329.9 0.4300000071525574 972 4876 5848 SUDHL4_400M_050219_2,5850 SUDHL4_400M_050219_2,5850,EYRWECMKRYP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5851 28.161 221.0 187760.0 25 0 26189.0 -1 0 70 499.27511746651845 498.26784099991846 1 499.2931701540947 MULTI CID FTMS 0 0 0 5848 48851.328125 0.0265822577096144 -57 1.0806159973144531 3 6 V 1 -1 10.181 0.0 0.0 2.0433 0.0 0.0 381.1883865094872 0.0 381.1883865094872 0.0 10.181060863272222 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.0433 - 5 + 1 1.756 40377.7 1.0 973 4876 5848 SUDHL4_400M_050219_2,5851 SUDHL4_400M_050219_2,5851, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5852 28.169 430.0 190000.0 25 0 35593.0 36315 SYLLHLKLR 9 100 381.5737625732008 0 381.5735656619072 PEAK CID FTMS 0 0 0 5848 108307.6953125 1.0 0 0.0 4 Unmodified _SYLLHLKLR_ ENST00000506591.1_1_5:145316511-145316655:+|nuORF 2.735195868890462 0.3444685223463735 6 H 1 8 3.0989 0.0 0.0 0.40715 0.0 0.0 379.9726766583173 241.07418237857652 621.0468590368939 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 0.40715 + + 7 + 1 1.756 69098.3 1.0 974 4876 5848 SUDHL4_400M_050219_2,5852 SUDHL4_400M_050219_2,5852,SYLLHLKLR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5853 28.183 800.0 139600.0 25 0 5827.7 6728 EDKRQDMANAF 11 103 662.7991404735951 1323.58372801399 2 662.7986938357353 MULTI CID FTMS 0 0 0 5848 82808.2265625 0.2223240141204009 -7 0.0789852142333984 5 Unmodified _EDKRQDMANAF_ ENSG00000062598|ENST00000290246|ELMO2;ENST00000480042.5_1_20:45008831-45014791:-|nuORF;nc|ENSG00000062598|Q96JJ3-3|ELMO2 24.99096001346401 0.505407273373304 6 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F} 13 9 + 128.83 0.0 0.0 9.7334 9.7334 86.015 0.0 0.0 0.0 1.5126767533064935 16.642078980768062 1.5126767533064935 1.5126767533064935 0 1.1861818737241734 1.3979400086720375 0.6382104921644451 2.341129063296272 {[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};[AG]NAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}GAG{M(Oxidation (M))|F}EA[AG]QNA{M(Oxidation (M))|F};[AG]GQG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}QG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};[AG]GGAG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GQ{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F} 9.7334;9.6191;9.0479;9.0479;9.0479;9.0278;9.0007;8.9848;8.9563;8.9439 -;-;-;-;-;-;-;-;-;- 6542 1 1.756 85201.0 0.449999988079071 975 4876 5848 SUDHL4_400M_050219_2,5853 SUDHL4_400M_050219_2,5853,EDKRQDMANAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5855 28.201 800.0 75159.0 25 0 5209.5 + 12619 GVIYTETCAL 10 109 535.2672363000411 1068.519919666882 2 535.2655517458916 MULTI CID FTMS 0 0 0 5854 55367.0703125 0.0045691339710515 44 -0.8391284942626953 1 Unmodified _GVIYTETCAL_ REV__ENSG00000174982|ENST00000641692|OR4S2 20.453626601364224 0.5043500229302764 6 DT[WK]A{I|L} 6 -1 26.916 0.0 0.0 2.519 0.0 0.0 336.1439424908604 0.0 336.1439424908604 0.0 15.496326264986369 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.0 DT[WK]A{I|L} 2.519 - 58 + 1 1.756 53030.4 0.4900000095367431 976 4877 5854 SUDHL4_400M_050219_2,5855 SUDHL4_400M_050219_2,5855,GVIYTETCAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5856 28.214 800.0 62160.0 25 0 15049.0 -1 0 28 1188.8161605331093 3563.426652199528 3 1189.484301745892 MULTI CID FTMS 0 0 0 5854 162814.6875 0.283178170810995 10 -0.2285690307617187 2 6 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.30782 0.0 0.0 2000.7043144083152 1355.6265021730817 3356.330816581397 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.30782 - 5 + 1 1.756 48617.0 0.4399999976158142 977 4877 5854 SUDHL4_400M_050219_2,5856 SUDHL4_400M_050219_2,5856, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5858 28.219 39.0 1337900.0 25 0 284100.0 + 12255 GQYPTQPTY 9 74 527.7454733714261 1053.476393809652 2 527.7455932497978 MULTI CID FTMS 0 0 0 5857 1262424.25 0.0486732157564634 14 -0.399148941040039 1 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 36.12702656103203 0.0967173616627612 6 [TP]QYG 5 6 42.101 0.0 0.0 3.9963 0.0 0.0 0.0 504.2125137649834 504.2125137649834 21.24374778865516 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.9876954943324544 0.3807196863200844 [TP]QYG 3.9963 - 120 1 1.756 44843.9 1.0 978 4878 5857 SUDHL4_400M_050219_2,5858 SUDHL4_400M_050219_2,5858,GQYPTQPTY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5859 28.233 800.0 121800.0 25 0 23137.0 + 8965 FANSRDTSF 9 123 522.7412712419671 1043.467989550734 2 522.7408935427666 MULTI CID FTMS 0 0 0 5857 120434.9453125 0.5352396244604697 -5 0.1023330688476562 2 Unmodified _FANSRDTSF_ ENSG00000169710|ENST00000306749|FASN 53.40400417844725 0.0329064971918313 6 SNAE 4 8 49.285 0.0 0.0 4.7232 0.0 0.0 624.2906971662125 0.0 624.2906971662125 0.0 18.750554289710863 0.0 0.0 0 0.4247425010840047 0.0 0.7742275032520141 0.7742275032520141 SNAE 4.7232 - 535 1 1.756 80185.2 0.5400000214576721 979 4878 5857 SUDHL4_400M_050219_2,5859 SUDHL4_400M_050219_2,5859,FANSRDTSF True True FANSRDTSF 28.23349 522.740893542767 1053463.375 5857.0 ENSG00000169710|ENST00000306749|FASN 6.695533593495687 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5861 28.242 334.0 237200.0 25 0 29402.0 + 42643 VTVNDIDPV 9 100 486.25483819911295 970.495123465026 2 486.2549316287041 MULTI CID FTMS 0 0 0 5860 211459.90625 0.3823835260908699 20 -0.5263957977294922 1 Unmodified _VTVNDIDPV_ REV__ENSG00000123384|ENST00000243077|LRP1 26.88365393820708 0.1891292719743517 6 [{I|L}T][C(Carbamidomethyl (C))H]Q 5 -1 27.319 0.0 0.0 2.8149 0.0 0.0 0.0 328.18516187738845 328.18516187738845 10.32924130362474 0.0 0.0 0.0 0 0.5 2.0 0.7302046884880937 0.0 [{I|L}T][C(Carbamidomethyl (C))H]Q 2.8149 - 112 1 1.756 64806.6 1.0 980 4879 5860 SUDHL4_400M_050219_2,5861 SUDHL4_400M_050219_2,5861,VTVNDIDPV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5862 28.256 800.0 195700.0 25 0 53699.0 + 30909 RISGVDRYY 9 102 564.7934272982388 1127.5723016632776 2 564.7932617068291 MULTI CID FTMS 0 0 0 5860 138859.203125 0.4536684347863197 -6 0.1214199066162109 2 Unmodified _RISGVDRYY_ ENSG00000125356|ENST00000371437|NDUFA1 43.77239144664712 0.0547478964384323 6 RDD[K{I|L}]RYY 8 5 + 38.153 0.0 0.0 3.3837 3.3837 81.45 0.0 0.0 0.0 15.194634427571856 12.334354687041031 12.334354687041031 10.82387206599456 0 1.3494850021680094 0.0 0.0 0.3054621874040891 RDD[K{I|L}]RYY;[TP]MG[K{I|L}]RYY;RDD[K{I|L}]RD[NP];[TP]MG[K{I|L}]RD[NP];R{I|L}[{M(Oxidation (M))|F}T]H{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP];Y[TP]RH{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[VP] 3.3837;2.4238;1.9829;1.0278;0.6581;0.62496 -;-;-;-;-;- 257 + 1 1.756 123044.9 0.5799999833106995 981 4879 5860 SUDHL4_400M_050219_2,5862 SUDHL4_400M_050219_2,5862,RISGVDRYY True True RISGVDRYY 28.255949 564.793261706829 1448366.75 5860.0 ENSG00000125356|ENST00000371437|NDUFA1 6.412517388661702 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5863 28.27 800.0 53443.0 25 0 12654.0 -1 0 40 1155.449761158808 3463.327454076624 3 1155.781909167767 MULTI CID FTMS 0 0 0 5860 71219.96875 0.444658174146545 -7 0.1265468597412109 3 6 Q 1 -1 5.4846 0.0 0.0 0.15836 0.0 0.0 2679.0534195080686 653.2066134088499 3332.2600329169186 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.15836 - 15 + 1 1.756 45728.1 0.2899999916553497 982 4879 5860 SUDHL4_400M_050219_2,5863 SUDHL4_400M_050219_2,5863, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5865 28.277 181.0 305020.0 25 0 32001.0 2012 APAVLHFPL 9 81 482.7823089440374 963.5500649548748 2 482.7820312380791 MULTI CID FTMS 0 0 0 5864 293601.28125 0.5677910292527258 9 -0.2323074340820312 1 Unmodified _APAVLHFPL_ ENSG00000243708|ENST00000458483|PLA2G4B;nc|ENSG00000243708|P0C869-4|PLA2G4B;nc|ENSG00000243708|P0C869-6|PLA2G4B 14.581692164780916 0.4419739649577144 6 [PA]APV 5 5 49.208 0.0 0.0 5.107 0.0 0.0 0.0 525.2793754122696 525.2793754122696 26.27636252551653 0.0 0.0 0.0 0 1.0 1.6989700043360187 0.0 0.0 [PA]APV 5.107 - 45 + 1 1.756 50660.6 1.0 983 4880 5864 SUDHL4_400M_050219_2,5865 SUDHL4_400M_050219_2,5865,APAVLHFPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5866 28.291 800.0 149930.0 25 0 10030.0 + 30901 RISDFHETY 9 105 584.2738521102145 1166.533151287229 2 584.2726928591728 MULTI CID FTMS 0 0 0 5864 80417.25 0.659331612977115 -4 0.1332149505615234 2 Unmodified _RISDFHETY_ ENSG00000183337|ENST00000378444|BCOR;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;nc|ENSG00000183337|Q6W2J9-2|BCOR;nc|ENSG00000183337|Q6W2J9-3|BCOR;nc|ENSG00000183337|Q6W2J9-4|BCOR 24.99096001346401 0.2132109383330889 6 Y{M(Oxidation (M))|F}TH{M(Oxidation (M))|F}[Q{I|L}]DP 9 8 + 53.814 0.0 0.0 4.6131 4.6131 78.716 0.0 0.0 0.0 18.384315473529185 4.424260384580805 4.424260384580805 4.424260384580805 0 0.0 1.6989700043360187 0.7742275032520141 0.3252574989159953 Y{M(Oxidation (M))|F}TH{M(Oxidation (M))|F}[Q{I|L}]DP;{[ET]|[MV]}[Q{I|L}]{M(Oxidation (M))|F}HETY;Y{M(Oxidation (M))|F}T[Q{I|L}]TMTY;Y{M(Oxidation (M))|F}T[TA]{[VA]|[{I|L}G]}MTY;[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}HETY;{[ET]|[MV]}[Q{I|L}]{M(Oxidation (M))|F}HTEY;Y{M(Oxidation (M))|F}[WR]TMTY;Y{M(Oxidation (M))|F}EQQ[Q{I|L}]DP;{[YC]|[HE]}{M(Oxidation (M))|F}T[Q{I|L}]ETY;[VP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}HTEY 4.6131;4.2339;4.0343;3.7615;3.7407;3.6117;3.479;3.2638;3.1886;3.1186 -;-;-;-;-;-;-;-;-;- 312 + 1 1.756 92198.1 0.4799999892711639 984 4880 5864 SUDHL4_400M_050219_2,5866 SUDHL4_400M_050219_2,5866,RISDFHETY False True RISDFHETY 28.291015 584.272692859173 516690.9375 5864.0 ENSG00000183337|ENST00000378444|BCOR;;nc|ENSG00000183337|Q6W2J9-3|BCOR;;ENST00000490976.5_1_X:39931586-39937182:-|nuORF;;nc|ENSG00000183337|Q6W2J9-2|BCOR;;nc|ENSG00000183337|Q6W2J9-4|BCOR 7.469534397125244 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5867 28.305 800.0 95289.0 25 0 7367.1 + 32028 RVIGEDGQSVY 11 90 611.8066455570306 1221.5987381808611 2 611.8072387576103 MULTI CID FTMS 0 0 0 5864 88062.0234375 0.6598923325271191 -2 0.0553779602050781 3 Unmodified _RVIGEDGQSVY_ ENSG00000183735|ENST00000331710|TBK1 46.0223103267499 0.1396584557920269 6 [RV]{I|L}GEDGQSVY 11 0 + 87.644 0.0 0.0 7.1745 7.1745 90.279 0.0 0.0 0.0 15.07062321345802 76.53444230074842 15.07062321345802 9.128498242810991 0 1.0 0.9208187539523752 0.8494850021680094 0.0 + + [RV]{I|L}GEDGQSVY;[RV]{I|L}GEDG[AG]SVY;[RV]{I|L}GE[SG]QDVY;[RV]{I|L}[WD]GQWY;[RV][DG]{[QN]|[E{I|L}]|[KN]}GQSVY;[RV]{I|L}GE[SG][AG]DVY;[RV]{I|L}G[WD]QWY;[RV]{I|L}GE{[WN]|[YH]}WY;[RV]{I|L}G{[QG]|[NA]}{[ES]|[DT]|[{I|L}C]}DVY;[RV]{I|L}[WD]G[AG]WY 7.1745;6.4272;5.0026;4.6314;4.4952;4.2553;4.2408;4.2408;3.9605;3.8776 +;-;-;-;-;-;-;-;-;- + 492 1 1.756 61929.7 0.4799999892711639 985 4880 5864 SUDHL4_400M_050219_2,5867 SUDHL4_400M_050219_2,5867,RVIGEDGQSVY False True RVIGEDGQSVY 28.304852 611.80723875761 680393.625 5864.0 ENSG00000183735|ENST00000331710|TBK1 8.913188934326172 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5870 28.316 255.0 518110.0 25 0 50708.0 + 11537 GIPPAPRGV 9 90 432.2586355527423 862.5027181722846 2 432.2584411501884 MULTI CID FTMS 0 0 0 5869 185245.8125 0.3346616600271032 -4 0.0943012237548828 1 Unmodified _GIPPAPRGV_ ENSG00000044574|ENST00000324460|HSPA5;ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000432228.1_1_2:222827655-222828180:+|nuORF;ENST00000509378.1_1_4:165110937-165111516:+|nuORF;ENST00000532091.1_1_11:122929265-122929517:-|nuORF;nc|ENSG00000204389|P0DMV8-2|HSPA1A 15.847184025352805 0.4077185912009129 6 {[VA]|[{I|L}G]}PPQ 5 5 34.704 0.0 0.0 4.0236 0.0 0.0 0.0 367.1979769342407 367.1979769342407 25.75122469078331 0.0 0.0 0.0 0 0.2396518287104437 1.3979400086720375 0.0 0.0 {[VA]|[{I|L}G]}PPQ 4.0236 - 42 + 1 1.756 106410.1 1.0 986 4882 5869 SUDHL4_400M_050219_2,5870 SUDHL4_400M_050219_2,5870,GIPPAPRGV False True GIPPAPRGV 28.316006 432.258441150188 7910526.5 5869.0 ENSG00000109971|ENST00000534624|HSPA8;;ENSG00000126803|ENST00000247207|HSPA2;;ENST00000509378.1_1_4:165110937-165111516:+|nuORF;;ENSG00000044574|ENST00000324460|HSPA5;;ENST00000532091.1_1_11:122929265-122929517:-|nuORF;;ENSG00000173110|ENST00000309758|HSPA6;;ENSG00000204388|ENST00000375650|HSPA1B;;nc|ENSG00000204389|P0DMV8-2|HSPA1A;;ENST00000432228.1_1_2:222827655-222828180:+|nuORF;;ENSG00000204390|ENST00000375654|HSPA1L;;ENSG00000204389|ENST00000375651|HSPA1A;;ENSG00000113013|ENST00000297185|HSPA9;;ENST00000425843.1_1_X:120337248-120337797:-|nuORF 3.118771473566691 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5873 28.333 585.0 103720.0 25 0 9654.4 -1 VLGSHCCFP 9 92 538.7360806954147 1075.4576084576292 2 539.2375366091728 MULTI CID FTMS 0 0 0 5872 122758.421875 0.2479542495199214 20 -0.4922962188720703 1 2 Carbamidomethyl (C) _VLGSHC(Carbamidomethyl (C))C(Carbamidomethyl (C))FP_ ENST00000510318.5_1_8:12953202-12953370:-|nuORF 8.593279151180031 0.6146971463335029 6 [{I|L}V]W[HC]N{I|L} 7 -1 35.462 0.0 0.0 3.2974 0.0 0.0 0.0 207.007177096896 207.007177096896 23.243719559664413 0.0 0.0 0.0 0 0.0 2.0 0.0 0.4247425010840047 [{I|L}V]W[HC]N{I|L} 3.2974 - 110 1 1.756 52395.0 1.0 987 4884 5872 SUDHL4_400M_050219_2,5873 SUDHL4_400M_050219_2,5873,VLGSHCCFP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5874 28.346 753.0 133570.0 25 0 9492.5 39417 VALGAAEK 8 145 379.7241992360424 757.4338455388848 2 379.7236511111259 MULTI CID FTMS 0 0 0 5872 116623.1875 0.9540152761130432 1 -0.0346832275390625 2 Unmodified _VALGAAEK_ ENSG00000145901|ENST00000521591|TNIP1;nc|ENSG00000145901|Q15025-2|TNIP1;nc|ENSG00000145901|Q15025-3|TNIP1;nc|ENSG00000145901|Q15025-4|TNIP1;nc|ENSG00000145901|Q15025-5|TNIP1;nc|ENSG00000145901|Q15025-6|TNIP1;nc|ENSG00000145901|Q15025-7|TNIP1;nc|ENSG00000145901|Q15025-8|TNIP1 28.486842064014134 0.4448922141344407 6 D[RK]EK 5 6 30.075 0.0 0.0 3.9707 0.0 0.0 83.07410628486484 0.0 83.07410628486484 0.0 9.106056125004828 0.0 0.0 0 0.6549471895720985 0.0 0.1307196863200844 0.0 D[RK]EK 3.9707 - 211 1 1.756 81441.0 1.0 988 4884 5872 SUDHL4_400M_050219_2,5874 SUDHL4_400M_050219_2,5874,VALGAAEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5875 28.355 503.0 193490.0 25 0 20007.0 -1 0 103 499.27511746651845 498.26784099991846 1 499.2752563357353 MULTI CID FTMS 0 0 0 5872 151599.78125 0.0824924236163471 -49 1.017314910888672 3 6 Y 1 -1 11.109 0.0 0.0 2.2296 0.0 0.0 317.1935592389794 0.0 317.1935592389794 0.0 1.77693828993287 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.2296 - 17 + 1 1.756 79858.6 1.0 989 4884 5872 SUDHL4_400M_050219_2,5875 SUDHL4_400M_050219_2,5875, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5877 28.361 139.0 326800.0 25 0 47562.0 + 31149 RLPDDDPTAV 10 69 549.7749461826226 1097.535339432045 2 549.7748290896416 MULTI CID FTMS 0 0 0 5876 415140.4375 0.3009594913257837 16 -0.4396381378173828 1 Unmodified _RLPDDDPTAV_ ENSG00000158623|ENST00000425248|COPG2 44.94466952835103 0.1098215951422272 6 [R{I|L}][DP]DDPTAV 10 0 + 61.176 0.0 0.0 5.5739 5.5739 90.563 0.0 0.0 0.0 8.066884185923655 39.776296993281406 8.066884185923655 22.21848749616356 0 0.9247425010840048 0.0 0.9247425010840048 0.3807196863200844 + + [R{I|L}][DP]DDPTAV;[R{I|L}][DP]DDPG[{I|L}T];[R{I|L}][DP]DD{[VA]|[{I|L}G]}[TP] 5.5739;3.5495;2.374 +;-;- + 90 1 1.756 41961.9 1.0 990 4885 5876 SUDHL4_400M_050219_2,5877 SUDHL4_400M_050219_2,5877,RLPDDDPTAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5878 28.366 232.0 191560.0 25 0 24804.0 -1 PFDTVCRCMM 10 62 674.7620506361268 1347.5095483390537 2 674.7629272341728 MULTI CID FTMS 0 0 0 5876 235221.625 0.7790642421542607 4 -0.1475372314453125 2 2 Carbamidomethyl (C),2 Oxidation (M) _PFDTVC(Carbamidomethyl (C))RC(Carbamidomethyl (C))M(Oxidation (M))M(Oxidation (M))_ ENST00000422717.1_1_9:32333457-32333676:-|nuORF 3.944395688203298 0.708391353636983 6 KMTY 4 -1 23.902 0.0 0.0 1.7738 0.0 0.0 806.2558384775285 0.0 806.2558384775285 0.0 11.142528621434094 0.0 0.0 0 0.0 0.0 0.25 0.0 KMTY 1.7738 - 74 + 1 1.756 39474.7 1.0 991 4885 5876 SUDHL4_400M_050219_2,5878 SUDHL4_400M_050219_2,5878,PFDTVCRCMM False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5879 28.379 800.0 77344.0 25 0 8918.8 + 1437 ALEEPDDQNRI 11 79 650.3116399708296 1298.608727008459 2 650.3112670779228 MULTI CID FTMS 0 0 0 5876 88513.578125 1.0 0 0.0 3 Unmodified _ALEEPDDQNRI_ ENSG00000072694|ENST00000358671|FCGR2B;ENST00000480308.5_1_1:161647083-161647340:+|nuORF;nc|ENSG00000072694|P31994-2|FCGR2B;nc|ENSG00000072694|P31994-3|FCGR2B;nc|ENSG00000072694|P31994-4|FCGR2B;nc|ENSG00000072694|P31994-5|FCGR2B 35.61225514009592 0.279986979807413 6 [{I|L}A]EEPDD 7 4 67.708 0.0 0.0 5.2139 0.0 0.0 0.0 526.2752716584276 526.2752716584276 60.71796966806488 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.8494850021680094 0.0 + [{I|L}A]EEPDD 5.2139 + + 50 + 1 1.756 53256.0 0.4600000083446502 992 4885 5876 SUDHL4_400M_050219_2,5879 SUDHL4_400M_050219_2,5879,ALEEPDDQNRI False True ALEEPDDQNRI 28.379493 650.311267077923 454193.5625 5876.0 ENST00000480308.5_1_1:161647083-161647340:+|nuORF;;nc|ENSG00000072694|P31994-3|FCGR2B;;nc|ENSG00000072694|P31994-5|FCGR2B;;nc|ENSG00000072694|P31994-2|FCGR2B;;nc|ENSG00000072694|P31994-4|FCGR2B;;ENSG00000072694|ENST00000358671|FCGR2B 5.856662591298421 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5880 28.384 217.0 369600.0 25 0 45520.0 + 26269 NQMPTQPQV 9 98 529.7503325586251 1057.4861121840502 2 529.7502319216728 MULTI CID FTMS 0 0 0 5876 212498.296875 0.2582077104781832 -4 0.0497322082519531 4 Oxidation (M) _NQM(Oxidation (M))PTQPQV_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 78.14939416004806 0.0179651292570206 6 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}PTQ 6 3 31.903 0.0 0.0 3.0169 0.0 0.0 0.0 339.16833242460365 339.16833242460365 11.994481281629326 0.0 0.0 0.0 0 0.5 0.0 1.0228787452803376 0.9049471895720984 + {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}PTQ 3.0169 + + 158 1 1.756 72411.9 1.0 993 4885 5876 SUDHL4_400M_050219_2,5880 SUDHL4_400M_050219_2,5880,NQMPTQPQV True False NQMPTQPQV 28.383608 529.750231921673 9234397.0 5876.0 EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;;ENSG00000100393|ENST00000263253|EP300 7.907482941945394 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5881 28.39 367.0 113190.0 25 0 20349.0 -1 0 70 556.2634467824491 555.2561703158491 1 556.2630493044853 MULTI CID FTMS 0 0 0 5876 183369.421875 0.3921546566540771 10 -0.3537120819091797 5 6 Y 1 -1 13.979 0.0 0.0 2.5176 0.0 0.0 374.1820564015897 0.0 374.1820564015897 0.0 3.798339223448153 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5176 - 8 + 1 1.756 38998.4 1.0 994 4885 5876 SUDHL4_400M_050219_2,5881 SUDHL4_400M_050219_2,5881, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5882 28.404 800.0 359470.0 25 0 6646.1 -1 0 172 735.0468381612087 2936.1582467784347 4 735.2983276247978 MULTI CID FTMS 0 0 0 5876 89997.359375 0.0688177701680932 -4 0.0497322082519531 6 6 EDTEEVEHWA{M(Oxidation (M))|F}[NS][C(Carbamidomethyl (C))S]VHEEAHHEE 24 -1 + 223.99 0.0 0.0 7.6285 7.6285 84.853 0.0 0.0 0.0 171.11815319796517 8.239805370239765 8.239805370239765 1.989700043360188 0 6.579863547571516 1.154901959985743 4.0400990676322905 0.0 EDTEEVEHWA{M(Oxidation (M))|F}[NS][C(Carbamidomethyl (C))S]VHEEAHHEE;EDTEEVEHWA{M(Oxidation (M))|F}[YN][NG]VHEEAHHEE;EDTEEVEHWAH[NP][C(Carbamidomethyl (C))S]VHEEAHHEE;EDTEEVEH{M(Oxidation (M))|F}EQ[YN][RN]HEEAHHEE;EDTEEVEHWA{M(Oxidation (M))|F}[YN][RN]HEEAHHEE;EDTE{M(Oxidation (M))|F}V{M(Oxidation (M))|F}TWAH[NS]QEVHEEAHHEE;EDTE{M(Oxidation (M))|F}V{M(Oxidation (M))|F}TWAHE{[SA]|[TG]}[NG]VHEEAHHEE;EDTEEVEH{M(Oxidation (M))|F}E[YR]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VHEEAHHEE;EDTEEVEH{M(Oxidation (M))|F}EQ[NS]HAE{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAHHEE;EDTEEVE{M(Oxidation (M))|F}HEQ[YN][RN]HEEAHHEE 7.6285;7.5608;7.3905;7.1694;7.1587;7.1342;7.1131;7.076;7.0664;7.0069 -;-;-;-;-;-;-;-;-;- 321860 + 1 1.756 201141.3 0.449999988079071 995 4885 5876 SUDHL4_400M_050219_2,5882 SUDHL4_400M_050219_2,5882, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5884 28.409 18.0 3342500.0 25 0 603680.0 + 44148 YLDPAQRGV 9 59 509.7693674528877 1017.5241819725752 2 509.7694885134697 MULTI CID FTMS 0 0 0 5883 3217123.5 1.0 0 0.0 1 Unmodified _YLDPAQRGV_ ENSG00000130731|ENST00000301686|METTL26;ENST00000448973.6_1_16:685849-686290:-|nuORF;nc|ENSG00000130731|Q96S19-2|METTL26;nc|ENSG00000130731|Q96S19-3|METTL26;nc|ENSG00000130731|Q96S19-4|METTL26;nc|ENSG00000130731|Q96S19-5|METTL26;nc|ENSG00000130731|Q96S19-6|METTL26 37.97399986684836 0.0865783450051559 6 [Y{I|L}]DPAQ 6 3 66.159 0.0 0.0 6.5019 0.0 0.0 0.0 327.1784265026912 327.1784265026912 55.70107520596089 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.8494850021680094 + [Y{I|L}]DPAQ 6.5019 + + 51 + 1 1.756 51649.1 1.0 996 4886 5883 SUDHL4_400M_050219_2,5884 SUDHL4_400M_050219_2,5884,YLDPAQRGV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5885 28.411 128.0 277360.0 25 0 50901.0 + 33808 SLDPKTNTL 9 69 494.7686373301524 987.5227217271048 2 494.7686645388603 MULTI CID FTMS 0 0 0 5883 286268.6875 0.9134608212713188 3 -0.0980720520019531 2 Unmodified _SLDPKTNTL_ ENSG00000127837|ENST00000248450|AAMP;ENST00000461911.1_1_2:219132163-219134845:-|nuORF;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF 37.97399986684836 0.0865783450051559 6 {[TV]|[{I|L}S]}D 3 6 36.695 0.0 0.0 3.7158 0.0 0.0 0.0 669.3567115554829 669.3567115554829 19.66067799904572 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[TV]|[{I|L}S]}D 3.7158 + + 114 1 1.756 34206.0 1.0 997 4886 5883 SUDHL4_400M_050219_2,5885 SUDHL4_400M_050219_2,5885,SLDPKTNTL True True SLDPKTNTL 28.411443 494.76866453886 2112610.0 5883.0 ENST00000489767.5_1_2:219130391-219134818:-|nuORF;;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;;ENSG00000127837|ENST00000248450|AAMP;;ENST00000461911.1_1_2:219132163-219134845:-|nuORF 6.083088874816895 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5887 28.418 233.0 236520.0 25 0 18342.0 -1 0 80 588.2390309901872 2936.158772617936 5 588.4398071169853 MULTI CID FTMS 0 0 0 5886 276559.84375 0.3550195675828158 -1 0.0073909759521484 1 6 H{NN|[MP]|[D{I|L}]|[EV]}EETPE 8 -1 32.396 0.0 0.0 1.1033 0.0 0.0 1967.7850355463868 0.0 1967.7850355463868 0.0 2.6021314145189223 0.0 0.0 0 0.2742275032520141 0.0 0.4247425010840047 0.0 H{NN|[MP]|[D{I|L}]|[EV]}EETPE 1.1033 - 202 1 1.756 48592.5 1.0 998 4887 5886 SUDHL4_400M_050219_2,5887 SUDHL4_400M_050219_2,5887, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5888 28.429 623.0 192610.0 25 0 23321.0 + 242 AAVVPEMHA 9 106 462.7340398347402 923.4535267362804 2 462.7338744997978 MULTI CID FTMS 0 0 0 5886 149278.6875 0.6503164476184389 -2 0.0568561553955078 2 Unmodified _AAVVPEMHA_ REV__ENSG00000119431|ENST00000374180|HDHD3 24.67388899826682 0.2172451872415813 6 [Q{I|L}]PVHSP{M(Oxidation (M))|F} 8 -1 + 31.961 0.0 0.0 3.461 3.461 78.704 0.0 0.0 0.0 8.381681563112402 3.65987537940164 3.65987537940164 8.839256468719157 0 0.3807196863200844 0.0 0.6549471895720985 0.0 [Q{I|L}]PVHSP{M(Oxidation (M))|F};[VP]HS[TP]{[WT]|[RM]};{[{M(Oxidation (M))|F}D]|MM}S{I|L}R{[WT]|[RM]};[HV]PS[TP]{[WT]|[RM]} 3.461;2.5038;1.4832;0.25227 -;-;-;- 191 + 1 1.756 94815.8 1.0 999 4887 5886 SUDHL4_400M_050219_2,5888 SUDHL4_400M_050219_2,5888,AAVVPEMHA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5889 28.437 417.0 235310.0 25 0 16061.0 + 1293 AIRQQIESY 9 104 554.2935060479763 1106.5724591627525 2 554.2933837771416 MULTI CID FTMS 0 0 0 5886 206474.375 0.6866508097987504 -2 0.0568561553955078 3 Unmodified _AIRQQIESY_ ENSG00000099956|ENST00000644036|SMARCB1;nc|ENSG00000099956|Q12824-2|SMARCB1 69.10491478415734 0.0214449631113747 6 [{I|L}A]RQQ{I|L}ESY 9 0 + 74.25 0.0 0.0 6.7099 6.7099 88.178 0.0 0.0 0.0 18.45493868698722 52.96443602398296 18.45493868698722 8.010299956639813 0 1.6861818737241734 1.3979400086720375 0.3494850021680094 0.3494850021680094 + + [{I|L}A]RQQ{I|L}ESY;[{I|L}A]RQQ{I|L}TDY;[{I|L}A]R[AG]Q{I|L}ESY;[{I|L}A]RQ[AG]{I|L}ESY;[{I|L}A]R[AG]Q{I|L}TDY;[{I|L}A]RQ[AG]{I|L}TDY;[{I|L}A]R[AG][AG]{I|L}ESY;[QA][R{I|L}]Q{I|L}ESY;[{I|L}A]R[AG][AG]{I|L}TDY;[{I|L}A]RQ[VP]{[CA]|SS}SY 6.7099;5.986;5.8777;5.8777;5.1539;5.1539;5.0496;4.4645;4.3257;3.9763 +;-;-;-;-;-;-;-;-;- + 381 1 1.756 76412.9 1.0 1000 4887 5886 SUDHL4_400M_050219_2,5889 SUDHL4_400M_050219_2,5889,AIRQQIESY True True AIRQQIESY 28.436658 554.293383777142 1491237.5 5886.0 nc|ENSG00000099956|Q12824-2|SMARCB1;;ENSG00000099956|ENST00000644036|SMARCB1 5.567283471425374 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5890 28.441 215.0 265720.0 25 0 65292.0 + 20089 LIYGTPRAA 9 69 481.2770398109943 960.5395266887886 2 481.2775756716728 MULTI CID FTMS 0 0 0 5886 169670.390625 1.0 0 0.0 4 Unmodified _LIYGTPRAA_ ENSG00000108946|ENST00000589228|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;nc|ENSG00000108946|P10644-2|PRKAR1A 26.88365393820708 0.1891292719743517 6 {I|L}{I|L}Y 3 6 34.705 0.0 0.0 3.6131 0.0 0.0 0.0 568.2855929010374 568.2855929010374 27.715299873086607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + {I|L}{I|L}Y 3.6131 + + 8 + 1 1.756 52011.1 1.0 1001 4887 5886 SUDHL4_400M_050219_2,5890 SUDHL4_400M_050219_2,5890,LIYGTPRAA False True LIYGTPRAA 28.440716 481.277575671673 1041370.3125 5886.0 ENSG00000188191|ENST00000537384|PRKAR1B;;ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 2.2896426394581795 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5891 28.455 800.0 165760.0 25 0 12278.0 + 17361 KLYRPGSVAY 10 137 577.3219333002197 1152.629313667239 2 577.3220092654228 MULTI CID FTMS 0 0 0 5886 131958.25 0.9667496814257108 -1 0.0073909759521484 5 Unmodified _KLYRPGSVAY_ ENSG00000131473|ENST00000352035|ACLY;nc|ENSG00000131473|P53396-2|ACLY;nc|ENSG00000131473|P53396-3|ACLY 65.47368725323818 0.0222277162070287 6 {I|L}[QP]VAY 6 5 35.512 0.0 0.0 3.081 0.0 0.0 463.2677174298844 0.0 463.2677174298844 0.0 1.28530614985209 0.0 0.0 0 1.305462187404089 0.0 0.0 1.048455006504028 {I|L}[QP]VAY 3.081 - 298 1 1.756 99874.9 0.5699999928474426 1002 4887 5886 SUDHL4_400M_050219_2,5891 SUDHL4_400M_050219_2,5891,KLYRPGSVAY True True KLYRPGSVAY 28.454549 577.322009265423 864030.0625 5886.0 ENSG00000131473|ENST00000352035|ACLY;;nc|ENSG00000131473|P53396-2|ACLY;;nc|ENSG00000131473|P53396-3|ACLY 7.295097986857097 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5892 28.468 800.0 204920.0 25 0 14836.0 + 30841 RILDESHSI 9 142 535.2858183509044 1068.557083768609 2 535.2853881716728 MULTI CID FTMS 0 0 0 5886 111877.359375 0.6876787470834296 -1 0.0073909759521484 6 Unmodified _RILDESHSI_ ENSG00000100888|ENST00000646647|CHD8;ENST00000554384.1_1_14:21876861-21881122:-|nuORF;nc|ENSG00000100888|Q9HCK8-2|CHD8 86.33184430468982 0.0159826143231117 6 [R{I|L}]{I|L}DESHS{I|L} 9 0 + 66.151 0.0 0.0 6.1907 6.1907 87.039 0.0 0.0 0.0 1.2415356369084378 51.26851079634197 1.2415356369084378 8.32264679816057 0 1.6593793813122062 0.0 1.1861818737241734 0.3494850021680094 + + [R{I|L}]{I|L}DESHS{I|L};[R{I|L}]{I|L}DTDHS{I|L};{I|L}{[QN]|[E{I|L}]|[KN]}S[{I|L}A]SHS{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KA][{I|L}A]SHS{I|L};[HV]H[RP]SHS{I|L};[HS]{I|L}SE[R{I|L}]D{I|L};{[TV]|[{I|L}S]}HSE[R{I|L}]D{I|L};[R{I|L}]{I|L}DTSHD{I|L};[HS]{I|L}SE{[RE]|[WV]}V{I|L};{[TV]|[{I|L}S]}HSE{[RE]|[WV]}V{I|L} 6.1907;5.4118;4.5123;3.7512;3.5249;3.0749;2.967;2.8782;2.4208;2.3129 +;-;-;-;-;-;-;-;-;- + 537 1 1.756 127905.8 0.5400000214576721 1003 4887 5886 SUDHL4_400M_050219_2,5892 SUDHL4_400M_050219_2,5892,RILDESHSI True True RILDESHSI 28.468381 535.285388171673 743521.625 5886.0 ENST00000554384.1_1_14:21876861-21881122:-|nuORF;;nc|ENSG00000100888|Q9HCK8-2|CHD8;;ENSG00000100888|ENST00000646647|CHD8 4.186983585357666 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5894 28.486 800.0 71031.0 25 0 3121.2 6729 EDKRQDMANAF 11 76 662.7991404735951 1323.58372801399 2 662.7999755740166 MULTI CID FTMS 0 0 0 5893 81125.375 0.2178058843394014 5 -0.1752510070800781 1 Unmodified _EDKRQDMANAF_ ENSG00000062598|ENST00000290246|ELMO2;ENST00000480042.5_1_20:45008831-45014791:-|nuORF;nc|ENSG00000062598|Q96JJ3-3|ELMO2 15.248480904072842 0.7179608125786238 6 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F} 12 8 + 95.014 0.0 0.0 7.1785 7.1785 90.201 0.0 0.0 0.0 16.34378951034654 15.374689380265975 15.374689380265975 9.098233696509112 0 0.6643943297944485 1.0969100130080565 0.0 1.579689690656103 {[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F};{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA[AG]QNA{M(Oxidation (M))|F};{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQ[AG]NA{M(Oxidation (M))|F};{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQGGA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]A[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQGGA{M(Oxidation (M))|F} 7.1785;6.4911;6.4911;6.4911;5.9437;5.8503;5.254;5.254;5.254;5.1606 -;-;-;-;-;-;-;-;-;- 893 1 1.756 50142.2 0.5699999928474426 1004 4888 5893 SUDHL4_400M_050219_2,5894 SUDHL4_400M_050219_2,5894,EDKRQDMANAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5895 28.497 653.0 342150.0 25 0 25675.0 -1 0 115 979.7266186361252 2936.158026508576 3 980.0615112185478 MULTI CID FTMS 0 0 0 5893 251974.234375 0.9153511594555148 -1 0.0569419860839843 2 6 NHAEEHVEEAEHAEGHEVEE[QA]Q 23 -1 196.35 0.0 0.0 6.6873 0.0 0.0 299.1128102033219 0.0 299.1128102033219 0.0 184.0423348902852 0.0 0.0 0 7.420818753952375 0.0 2.3723637474483468 0.4247425010840047 NHAEEHVEEAEHAEGHEVEE[QA]Q 6.6873 - 82289 1 1.756 145132.7 1.0 1005 4888 5893 SUDHL4_400M_050219_2,5895 SUDHL4_400M_050219_2,5895, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5896 28.502 249.0 332440.0 25 0 153580.0 -1 0 67 482.241693380737 481.234416914137 1 482.2414123415947 MULTI CID FTMS 0 0 0 5893 187609.421875 0.8182314347988215 -2 0.0643329620361328 3 6 [PA]A[HS] 5 -1 + 24.437 0.0 0.0 5.078 5.078 88.985 0.0 0.0 0.0 16.989700043360187 2.385606273598313 2.385606273598313 24.436974992327123 0 0.0 1.3979400086720375 0.0 0.0 [PA]A[HS] 5.078 - 20 1 1.756 70033.6 1.0 1006 4888 5893 SUDHL4_400M_050219_2,5896 SUDHL4_400M_050219_2,5896, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5898 28.519 800.0 71565.0 25 0 23751.0 -1 0 75 657.3089591031546 656.3016826365546 1 657.3087036013603 MULTI CID FTMS 0 0 0 5897 78283.609375 0.2908465061737711 12 -0.2921009063720703 1 6 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PP{[TV]|[{I|L}S]} 6 -1 + 22.315 0.0 0.0 3.4001 3.4001 81.763 0.0 0.0 0.0 4.79789321344369 5.615455565519472 4.79789321344369 11.523135216873197 0 1.0 0.0 0.6171302707394362 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PP{[TV]|[{I|L}S]};{[HG]|PP}S{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[PS]P{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 3.4001;1.6444;1.5237 -;-;- 29 1 1.756 47531.7 0.4600000083446502 1007 4889 5897 SUDHL4_400M_050219_2,5898 SUDHL4_400M_050219_2,5898, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5899 28.521 130.0 485190.0 25 0 264750.0 -1 0 47 488.26959905228057 487.2623225856806 1 488.2674133181572 MULTI CID FTMS 0 0 0 5897 409546.9375 0.9233335594903112 1 -0.03289794921875 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.756 56109.7 1.0 1008 4889 5897 SUDHL4_400M_050219_2,5899 SUDHL4_400M_050219_2,5899, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5900 28.535 800.0 43262.0 25 0 11636.0 -1 0 31 1196.8281781945602 3587.4627051838806 3 1197.495166003704 MULTI CID FTMS 0 0 0 5897 102446.609375 1.0 0 0.0 3 6 G 1 -1 6.9897 0.0 0.0 0.19484 0.0 0.0 2147.753749378563 1379.661068017303 3527.414817395866 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19484 - 2 + 1 1.756 39476.6 0.3499999940395355 1009 4889 5897 SUDHL4_400M_050219_2,5900 SUDHL4_400M_050219_2,5900, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5902 28.551 800.0 36328.0 25 0 6893.8 -1 0 32 1155.449761158808 3463.327454076624 3 1156.453540027142 MULTI CID FTMS 0 0 0 5901 39482.13671875 0.3840582546199796 3 -0.1086139678955078 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.756 32263.9 0.3000000119209289 1010 4890 5901 SUDHL4_400M_050219_2,5902 SUDHL4_400M_050219_2,5902, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5903 28.565 800.0 196170.0 25 0 22355.0 + 44318 YLNEQGDRVY 10 117 628.7986683165636 1255.5827836999272 2 628.7992431521416 MULTI CID FTMS 0 0 0 5901 144991.71875 0.5751427216365926 -2 0.0666370391845703 2 Unmodified _YLNEQGDRVY_ ENSG00000182117|ENST00000328848|NOP10 88.36371040165146 0.0102134265615327 6 Y{I|L}NEQGDRVY 10 0 + 118.88 0.0 0.0 9.4682 9.4682 93.297 0.0 0.0 0.0 84.30673727311253 15.089096130665707 15.089096130665707 9.164539485499247 0 1.7474250108400469 2.0 1.3979400086720375 1.2302046884880935 + + Y{I|L}NEQGDRVY;Y{I|L}GGEQGDRVY;Y{I|L}NE[AG]GDRVY;Y{I|L}N{M(Oxidation (M))|F}[YV]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Y;[Y{I|L}]N[QT]NNN{I|L}Y;[Y{I|L}]N[QT]NNQVY;{[QN]|[E{I|L}]|[KN]}[TA]HGQEWW;[VP]{[MS]|[{M(Oxidation (M))|F}A]}HGQEWW;[Y{I|L}]N[QT]NND{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QN]|[E{I|L}]|[KN]}[TA]HG[AG]EWW 9.4682;8.7383;8.7383;4.9744;3.743;3.5095;3.3019;3.0452;2.8801;2.572 +;-;-;-;-;-;-;-;-;- + 2717 + 1 1.756 117178.3 0.5899999737739563 1011 4890 5901 SUDHL4_400M_050219_2,5903 SUDHL4_400M_050219_2,5903,YLNEQGDRVY True True YLNEQGDRVY 28.565253 628.799243152142 1436651.375 5901.0 ENSG00000182117|ENST00000328848|NOP10 7.2884799639383955 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5904 28.578 724.0 122560.0 25 0 11197.0 + 38568 TSYDWSSL 8 131 479.7093328022461 957.4041126712922 2 479.7097961306572 MULTI CID FTMS 0 0 0 5901 88802.0703125 1.0 0 0.0 3 Unmodified _TSYDWSSL_ REV__nc|ENSG00000138653|Q9H3R1-2|NDST4 32.116972079565 0.368454113111938 6 P 1 -1 13.495 0.0 0.0 1.4095 0.0 0.0 842.3403747335954 0.0 842.3403747335954 0.0 0.5617997398388752 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.4095 - 188 + 1 1.756 71874.3 1.0 1012 4890 5901 SUDHL4_400M_050219_2,5904 SUDHL4_400M_050219_2,5904,TSYDWSSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5905 28.587 548.0 142220.0 25 0 27464.0 -1 0 87 548.290857997598 547.2835815309979 1 548.2914916872978 MULTI CID FTMS 0 0 0 5901 129349.734375 0.9292815553554192 -3 0.1235790252685546 4 6 Q 1 -1 11.292 0.0 0.0 2.0633 0.0 0.0 401.2140757710354 0.0 401.2140757710354 0.0 2.143667562082223 0.0 0.0 0 0.0 0.0 0.0 0.1203715150305281 Q 2.0633 - 10 + 1 1.756 66660.4 1.0 1013 4890 5901 SUDHL4_400M_050219_2,5905 SUDHL4_400M_050219_2,5905, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5907 28.595 170.0 605760.0 25 0 94692.0 + 11538 GIPPAPRGV 9 85 432.2586355527423 862.5027181722846 2 432.2585021853447 MULTI CID FTMS 0 0 0 5906 248430.9375 0.4488107386818233 5 -0.1249408721923828 1 Unmodified _GIPPAPRGV_ ENSG00000044574|ENST00000324460|HSPA5;ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9;ENSG00000126803|ENST00000247207|HSPA2;ENSG00000173110|ENST00000309758|HSPA6;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;ENST00000432228.1_1_2:222827655-222828180:+|nuORF;ENST00000509378.1_1_4:165110937-165111516:+|nuORF;ENST00000532091.1_1_11:122929265-122929517:-|nuORF;nc|ENSG00000204389|P0DMV8-2|HSPA1A 15.847184025352805 0.4077185912009129 6 {[VA]|[{I|L}G]}PPA 5 4 33.218 0.0 0.0 3.8514 0.0 0.0 0.0 424.2310274713501 424.2310274713501 32.505101354121344 0.0 0.0 0.0 0 0.2215141619232908 1.3010299956639813 0.0 0.0 + {[VA]|[{I|L}G]}PPA 3.8514 + + 11 + 1 1.756 84268.3 1.0 1014 4891 5906 SUDHL4_400M_050219_2,5907 SUDHL4_400M_050219_2,5907,GIPPAPRGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5908 28.606 638.0 151890.0 25 0 33999.0 19212 LEGEREVSY 9 103 541.2639278429249 1080.5133027526497 2 541.2614013552666 MULTI CID FTMS 0 0 0 5906 83216.625 0.792269124300843 -1 0.0524024963378906 2 Unmodified _LEGEREVSY_ ENSG00000181467|ENST00000323534|RAP2B 34.40172386719151 0.1061884637610825 6 {[QN]|[E{I|L}]|[KN]}[WR]EVSY 8 2 + 45.684 0.0 0.0 4.228 4.228 84.076 0.0 0.0 0.0 7.508943624335558 28.69456889533673 7.508943624335558 11.020599913279623 0 0.5 1.2218487496163564 0.6861818737241735 0.0 {[QN]|[E{I|L}]|[KN]}[WR]EVSY;{[QN]|[E{I|L}]|[KN]}[WR]TVDY;{[QN]|[E{I|L}]|[KN]}[WR]EWY;{[QN]|[E{I|L}]|[KN]}QQ[KS]VSY;[HM]V[KS]{[ET]|[MV]}SY;{[QN]|[E{I|L}]|[KN]}QQ[WK]SY;[HM][WK]MVSY;[HM]{[ET]|[MV]}[KS]VSY;[HM]{[ET]|[MV]}[KS]WY;{[QN]|[E{I|L}]|[KN]}QQ[KS]WY 4.228;3.2081;3.1721;2.7606;2.2579;2.161;2.0225;1.8872;1.7504;1.6983 -;-;-;-;-;-;-;-;-;- 162 1 1.756 80441.8 1.0 1015 4891 5906 SUDHL4_400M_050219_2,5908 SUDHL4_400M_050219_2,5908,LEGEREVSY True False GIREEEVSY 28.605749 541.261401355267 524206.09375 5906.0 nc|ENSG00000090989|Q9NV70-2|EXOC1;;ENST00000506936.1_1_4:56768485-56770658:+|nuORF;;ENSG00000090989|ENST00000381295|EXOC1 -0.2907081842422485 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5909 28.614 440.0 210560.0 25 0 16717.0 + -1 MYVLDETAL 9 120 535.7592906537812 1069.5040283743624 2 535.7592040896416 MULTI CID FTMS 0 0 0 5906 183960.421875 0.3772263095061873 -6 0.2328376770019531 3 Oxidation (M) _M(Oxidation (M))YVLDETAL_ REV__ENSG00000117305|ENST00000374490|HMGCL;REV__ENST00000509389.5_1_1:24130838-24151905:-|nuORF;REV__nc|ENSG00000117305|P35914-2|HMGCL;REV__nc|ENSG00000117305|P35914-3|HMGCL 30.22481116460888 0.1466181017706357 6 EDTRGTA{I|L} 8 -1 66.363 0.0 0.0 6.205 0.0 0.0 208.08484084297032 0.0 208.08484084297032 0.0 46.71704296901929 0.0 0.0 0 2.6747425010840047 0.0 0.75 0.0 EDTRGTA{I|L} 6.205 - 708 1 1.756 74571.4 1.0 1016 4891 5906 SUDHL4_400M_050219_2,5909 SUDHL4_400M_050219_2,5909,MYVLDETAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5911 28.622 327.0 158950.0 25 0 21190.0 + -1 AQAPDLQRV 9 84 499.27511746651845 498.26784099991846 1 499.2747070193291 MULTI CID FTMS 0 0 0 5910 179893.859375 0.097888534740495 -41 1.040266036987305 1 ENSG00000111641|ENST00000322166|NOP2;nc|ENSG00000111641|P46087-4|NOP2;nc|ENSG00000111641|P46087-2|NOP2;nc|ENSG00000111641|P46087-3|NOP2 6 [QA]A 3 -1 19.895 0.0 0.0 3.9927 0.0 0.0 0.0 225.11147438298408 225.11147438298408 9.805906063131722 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 0.3494850021680094 [QA]A 3.9927 - 9 1 1.756 46068.0 1.0 1017 4892 5910 SUDHL4_400M_050219_2,5911 SUDHL4_400M_050219_2,5911, False False AQAPDLQRV 28.622057 499.274707019329 18986992.0 5910.0 ENSG00000111641|ENST00000322166|NOP2;;nc|ENSG00000111641|P46087-4|NOP2;;nc|ENSG00000111641|P46087-2|NOP2;;nc|ENSG00000111641|P46087-3|NOP2 3.841418981552124 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5912 28.626 219.0 229830.0 25 0 22290.0 + 23091 LSMEPLAF 8 84 454.2352728007568 906.4559926683136 2 454.2357360720634 MULTI CID FTMS 0 0 0 5910 134670.375 0.3002729138063951 -7 0.2590007781982422 2 Unmodified _LSMEPLAF_ REV__ENSG00000133958|ENST00000695012|UNC79;REV__nc|ENSG00000133958|Q9P2D8-2|UNC79;REV__nc|ENSG00000133958|Q9P2D8-3|UNC79;REV__nc|ENSG00000133958|Q9P2D8|UNC79 14.581692164780916 0.6954967302934248 6 A{M(Oxidation (M))|F} 2 -1 25.969 0.0 0.0 2.8649 0.0 0.0 670.3397950138199 0.0 670.3397950138199 0.0 20.28151250383644 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 A{M(Oxidation (M))|F} 2.8649 + + 46 + 1 1.756 47683.3 1.0 1018 4892 5910 SUDHL4_400M_050219_2,5912 SUDHL4_400M_050219_2,5912,LSMEPLAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5913 28.63 188.0 367820.0 25 0 99168.0 28706 PVSLGFPRA 9 96 472.2734082004043 0 472.2741882205009 PEAK CID FTMS 0 0 0 5910 255998.234375 0.6817139782370965 3 -0.0947113037109375 3 Unmodified _PVSLGFPRA_ ENST00000526570.5_1_8:38271148-38285795:-|nuORF 7.910154910731844 0.3362437653303669 6 P 1 8 6.9897 0.0 0.0 0.74159 0.0 0.0 299.1511889603493 543.3049706941264 842.4561596544756 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.74159 + + 4 + 1 1.756 58043.8 1.0 1019 4892 5910 SUDHL4_400M_050219_2,5913 SUDHL4_400M_050219_2,5913,PVSLGFPRA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5914 28.644 800.0 141540.0 25 0 14452.0 + 17355 KLYDPGQQY 9 129 556.275630236246 0 556.2763549685478 PEAK CID FTMS 0 0 0 5910 86666.6015625 0.8537352613193759 2 -0.0562152862548828 4 Unmodified _KLYDPGQQY_ ENSG00000180448|ENST00000313093|ARHGAP45;ENST00000587602.5_1_19:1073185-1086002:+|nuORF;nc|ENSG00000180448|Q92619-2|ARHGAP45 45.69961567697781 0.0434306681590773 6 QQ[PG]D 5 7 21.872 0.0 0.0 1.9695 0.0 0.0 181.0769149156867 401.21921716861567 582.2961320843024 0.0 0.0 0.0 0.0 0 1.0941876774005248 0.0 0.0 0.7742275032520141 QQ[PG]D 1.9695 - 229 + 1 1.756 88560.2 0.449999988079071 1020 4892 5910 SUDHL4_400M_050219_2,5914 SUDHL4_400M_050219_2,5914,KLYDPGQQY True True KLYDPGQQY 28.643623 556.276354968548 655193.625 5910.0 nc|ENSG00000180448|Q92619-2|ARHGAP45;;ENST00000587602.5_1_19:1073185-1086002:+|nuORF;;ENSG00000180448|ENST00000313093|ARHGAP45 4.323482036590576 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5916 28.651 187.0 268610.0 25 0 20892.0 + 26270 NQMPTQPQV 9 87 529.7503325586251 1057.4861121840502 2 529.7503539919853 MULTI CID FTMS 0 0 0 5915 246431.109375 0.2994396354138662 4 -0.0827198028564453 1 Oxidation (M) _NQM(Oxidation (M))PTQPQV_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 48.345845343767074 0.0439967357579942 6 PQV 3 6 20.388 0.0 0.0 1.9279 0.0 0.0 715.2956850873103 0.0 715.2956850873103 0.0 1.8838085591843488 0.0 0.0 0 0.5 0.0 0.0 0.805462187404089 + PQV 1.9279 + + 210 + 1 1.756 46851.7 1.0 1021 4893 5915 SUDHL4_400M_050219_2,5916 SUDHL4_400M_050219_2,5916,NQMPTQPQV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5917 28.656 261.0 253980.0 25 0 52191.0 -1 0 80 735.0468381612087 2936.1582467784347 4 735.2980834841728 MULTI CID FTMS 0 0 0 5915 175437.859375 0.1341510725325214 4 -0.0827198028564453 2 6 HMPEET[EP] 8 -1 21.24 0.0 0.0 0.72338 0.0 0.0 1967.789142412243 0.0 1967.789142412243 0.0 4.029549571542791 0.0 0.0 0 0.7326446478103829 0.0 0.4247425010840047 0.0 HMPEET[EP] 0.72338 - 634 1 1.756 56759.4 1.0 1022 4893 5915 SUDHL4_400M_050219_2,5917 SUDHL4_400M_050219_2,5917, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5918 28.67 800.0 87574.0 25 0 6818.0 + + 39394 KIGQPTVSY 9 115 496.774394606574 0 496.7744323611259 PEAK CID FTMS 0 0 0 5915 90823.3828125 0.6741008147037495 -7 0.2395839691162109 3 Unmodified _VAKQLSPSY_ nc|ENSG00000174547|Q9Y3B7-2|MRPL11;nc|ENSG00000174547|Q9Y3B7-3|MRPL11;ENST00000524576.5_1_11:66203480-66233392:-|nuORF;ENSG00000174547|ENST00000310999|MRPL11 46.020951573049366 0.0425517664003206 6 SVKSP 5 -1 41.709 0.0 0.0 4.2065 0.0 0.0 181.073006887173 309.15571008853755 490.22871697571054 0.0 0.0 0.0 0.0 0 1.3807196863200843 0.0 1.16944517631652 0.0 SVKSP 4.2065 - 217 + 1 1.756 58396.8 0.4699999988079071 1023 4893 5915 SUDHL4_400M_050219_2,5918 SUDHL4_400M_050219_2,5918,VAKQLSPSY False False KIGQPTVSY 28.669786 496.774432361126 704561.9375 5915.0 nc|ENSG00000174547|Q9Y3B7-2|MRPL11;;nc|ENSG00000174547|Q9Y3B7-3|MRPL11;;ENST00000524576.5_1_11:66203480-66233392:-|nuORF;;ENSG00000174547|ENST00000310999|MRPL11 4.9365739822387695 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5920 28.678 304.0 254030.0 25 0 43265.0 + 44149 YLDPAQRGV 9 79 509.7693674528877 1017.5241819725752 2 509.7694579958916 MULTI CID FTMS 0 0 0 5919 231851.421875 0.0720679271016484 8 -0.1284847259521484 1 Unmodified _YLDPAQRGV_ ENSG00000130731|ENST00000301686|METTL26;ENST00000448973.6_1_16:685849-686290:-|nuORF;nc|ENSG00000130731|Q96S19-2|METTL26;nc|ENSG00000130731|Q96S19-3|METTL26;nc|ENSG00000130731|Q96S19-4|METTL26;nc|ENSG00000130731|Q96S19-5|METTL26;nc|ENSG00000130731|Q96S19-6|METTL26 34.40172386719151 0.1061884637610825 6 Y{I|L}DPAQ 6 3 76.146 0.0 0.0 7.4835 0.0 0.0 0.0 327.17902551822505 327.17902551822505 62.65153777800478 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + Y{I|L}DPAQ 7.4835 + + 97 + 1 1.756 63283.2 1.0 1024 4894 5919 SUDHL4_400M_050219_2,5920 SUDHL4_400M_050219_2,5920,YLDPAQRGV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5921 28.683 301.0 181530.0 25 0 16604.0 + 12256 GQYPTQPTY 9 83 527.7454733714261 1053.476393809652 2 527.7455322146416 MULTI CID FTMS 0 0 0 5919 207652.328125 0.0080061093322312 30 -0.3765468597412109 2 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 25.399314129420983 0.2080152500878129 6 [TP]QY 4 5 27.708 0.0 0.0 2.6301 0.0 0.0 0.0 561.2296646438896 561.2296646438896 1.2932569876205235 0.0 0.0 0.0 0 0.0 1.154901959985743 1.1237125054200234 0.0 [TP]QY 2.6301 - 93 1 1.756 49303.1 1.0 1025 4894 5919 SUDHL4_400M_050219_2,5921 SUDHL4_400M_050219_2,5921,GQYPTQPTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5922 28.694 635.0 181440.0 25 0 14885.0 + 45152 YQEKGVRVL 9 137 364.5450706900658 1090.6133826703974 3 364.5450317263603 MULTI CID FTMS 0 0 0 5919 87081.515625 0.900911731465368 3 -0.0565528869628906 3 Unmodified _YQEKGVRVL_ ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2 3.944395688203298 0.7769873103969335 6 {M(Oxidation (M))|F} 1 9 10.596 0.0 0.0 0.97156 0.0 0.0 925.5342028381692 0.0 925.5342028381692 0.0 0.6810987350899467 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.97156 - 43 + 1 1.756 96833.9 1.0 1026 4894 5919 SUDHL4_400M_050219_2,5922 SUDHL4_400M_050219_2,5922,YQEKGVRVL False True YQEKGVRVL 28.694481 364.54503172636 573281.875 5919.0 ENSG00000138071|ENST00000260641|ACTR2;;nc|ENSG00000138071|P61160-2|ACTR2 4.932894786198934 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5923 28.708 800.0 57597.0 25 0 17286.0 -1 0 55 588.2390309901872 2936.158772617936 5 588.4397460818291 MULTI CID FTMS 0 0 0 5919 133479.796875 0.171347868602506 6 -0.0941848754882812 4 6 ET 2 -1 7.9588 0.0 0.0 0.27106 0.0 0.0 2480.0118437622705 223.03644739322505 2703.0482911554955 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ET 0.27106 - 16 + 1 1.756 43418.1 0.5600000023841858 1027 4894 5919 SUDHL4_400M_050219_2,5923 SUDHL4_400M_050219_2,5923, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5926 28.72 304.0 255020.0 25 0 48089.0 + 3134 AVPPALRGP 9 69 439.266509429665 876.51846592613 2 439.2663452029228 MULTI CID FTMS 0 0 0 5925 169898.671875 0.0512766512780179 -19 0.5294914245605469 1 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 6 {[VA]|[{I|L}G]}PPA 5 -1 43.768 0.0 0.0 4.9934 0.0 0.0 0.0 438.2469857657179 438.2469857657179 40.27310937020445 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.9934 + + 28 + 1 1.756 65136.1 1.0 1028 4896 5925 SUDHL4_400M_050219_2,5926 SUDHL4_400M_050219_2,5926,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5927 28.723 98.0 680740.0 25 0 120300.0 + 37175 TIDPNTRTL 9 70 515.7800454646359 1029.5455379960715 2 515.7802001833916 MULTI CID FTMS 0 0 0 5925 487649.375 0.2428698144657013 -14 0.40362548828125 2 Unmodified _TIDPNTRTL_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;nc|ENSG00000107937|Q9BZE4-3|GTPBP4 18.373094154950223 0.3393451798331396 6 [{I|L}T]DPN 5 4 46.8 0.0 0.0 4.5457 0.0 0.0 0.0 486.26532922916255 486.26532922916255 43.70125036785115 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 + [{I|L}T]DPN 4.5457 + + 104 + 1 1.756 57464.6 1.0 1029 4896 5925 SUDHL4_400M_050219_2,5927 SUDHL4_400M_050219_2,5927,TIDPNTRTL False True TIDPNTRTL 28.722589 515.780200183392 9332095.0 5925.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 4.065363883972168 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5928 28.726 197.0 294630.0 25 0 58615.0 + 45539 YTYTSKAL 8 79 473.7477970218415 945.481041110483 2 473.7474548220634 MULTI CID FTMS 0 0 0 5925 172970.453125 0.5387601766025816 -8 0.2439804077148437 3 Unmodified _YTYTSKAL_ ENSG00000172578|ENST00000341319|KLHL6;ENST00000487643.1_1_3:183240843-183262455:-|nuORF;ENST00000489245.5_1_3:183211997-183273441:-|nuORF 19.256988751693697 0.6264283240490721 6 [YT]YTS[KA]{I|L} 8 0 + 39.831 0.0 0.0 4.2128 4.2128 84.57 0.0 0.0 0.0 11.586615947324075 2.3957751657678727 2.3957751657678727 13.11919338094107 0 0.4247425010840047 2.0 0.0 0.0 + + [YT]YTS[KA]{I|L};[YT][HA][WR]{I|L} 4.2128;2.8252 +;- + 136 + 1 1.756 52601.4 1.0 1030 4896 5925 SUDHL4_400M_050219_2,5928 SUDHL4_400M_050219_2,5928,YTYTSKAL False True YTYTSKAL 28.726354 473.747454822063 1501432.625 5925.0 ENST00000487643.1_1_3:183240843-183262455:-|nuORF;;ENST00000489245.5_1_3:183211997-183273441:-|nuORF;;ENSG00000172578|ENST00000341319|KLHL6 2.5488058278958 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5931 28.741 425.0 160320.0 25 0 14931.0 + 1666 ALNPESEQY 9 96 525.7410832775439 1049.4676136218875 2 525.7406494021416 MULTI CID FTMS 0 0 0 5930 163964.734375 0.8527376115578599 5 -0.0777091979980468 1 Unmodified _ALNPESEQY_ ENSG00000084774|ENST00000264705|CAD 27.22323531849824 0.1848086127304535 6 [AG]GPQ[HT]C 8 7 25.72 0.0 0.0 2.4508 0.0 0.0 0.0 295.147825374094 295.147825374094 5.508558805562529 0.0 0.0 0.0 0 0.5 1.3010299956639813 0.0 0.8494850021680094 [AG]GPQ[HT]C 2.4508 - 637 1 1.756 56018.3 1.0 1031 4898 5930 SUDHL4_400M_050219_2,5931 SUDHL4_400M_050219_2,5931,ALNPESEQY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5932 28.746 304.0 182760.0 25 0 29442.0 7601 EIPDGQITV 9 69 486.25483819911295 970.495123465026 2 486.2547485232353 MULTI CID FTMS 0 0 0 5930 146884.84375 0.265612264180371 39 -0.445352554321289 2 Unmodified _EIPDGQITV_ ENSG00000157764|ENST00000646891|BRAF;ENST00000497784.1_2_7:140434399-140508041:-|nuORF 16.942295170755138 0.3780752226737986 6 [{I|L}T][C(Carbamidomethyl (C))H]Q 5 7 27.319 0.0 0.0 2.8149 0.0 0.0 0.0 328.1876643187947 328.1876643187947 13.339541260264554 0.0 0.0 0.0 0 0.5 2.0 0.7302046884880937 0.0 [{I|L}T][C(Carbamidomethyl (C))H]Q 2.8149 - 84 1 1.756 50875.9 1.0 1032 4898 5930 SUDHL4_400M_050219_2,5932 SUDHL4_400M_050219_2,5932,EIPDGQITV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5933 28.76 800.0 121220.0 25 0 10426.0 -1 NQKDGMVSF 9 125 521.2372273382396 1040.459901743279 2 521.2375976443291 MULTI CID FTMS 0 0 0 5930 96959.3203125 1.0 0 0.0 3 Oxidation (M) _NQKDGM(Oxidation (M))VSF_ ENSG00000141030|ENST00000268717|COPS3;nc|ENSG00000141030|Q9UNS2-2|COPS3 22.736283301280096 0.2418982879461534 6 [{I|L}V][C(Carbamidomethyl (C))M]WVS{M(Oxidation (M))|F} 8 -1 [{I|L}V][C(Carbamidomethyl (C))M]WV + + 25.227 0.55639 0.070576 2.4246 2.4246 50.813 0.0 0.0 0.0 0.0 12.999685357820717 0.0 0.0 0 0.4247425010840047 0.0 0.2396518287104437 0.0 [{I|L}V][C(Carbamidomethyl (C))M]WVS{M(Oxidation (M))|F} 2.4246 - 174 + 1 1.756 79624.2 0.4699999988079071 1033 4898 5930 SUDHL4_400M_050219_2,5933 SUDHL4_400M_050219_2,5933,NQKDGMVSF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5936 28.78 800.0 108940.0 25 0 11283.0 + 17150 KLIDRTESL 9 91 537.8113102225499 1073.6080675118997 2 537.8110229372978 MULTI CID FTMS 0 0 0 5935 93608.5390625 0.2510575016911227 -13 0.3525447845458984 1 Unmodified _KLIDRTESL_ ENSG00000130592|ENST00000311604|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;nc|ENSG00000130592|P33241-2|LSP1;nc|ENSG00000130592|P33241-3|LSP1 34.221707139014875 0.1071766711162635 6 K{I|L}{I|L}D{M(Oxidation (M))|F} 5 5 47.123 0.0 0.0 4.3892 0.0 0.0 0.0 454.2371309869751 454.2371309869751 32.20114073819602 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 K{I|L}{I|L}D{M(Oxidation (M))|F} 4.3892 - 69 + 1 1.756 71587.3 0.4900000095367431 1034 4900 5935 SUDHL4_400M_050219_2,5936 SUDHL4_400M_050219_2,5936,KLIDRTESL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5937 28.794 800.0 94326.0 25 0 9929.8 + 1190 AIDDCNQTDD 10 120 555.2062354785386 1108.397918023877 2 555.2070800662041 MULTI CID FTMS 0 0 0 5935 85352.125 0.7905930682559184 -1 0.0040664672851562 2 Unmodified _AIDDCNQTDD_ REV__ENSG00000162694|ENST00000370114|EXTL2 8.155526934196011 0.6889124077178598 6 [{I|L}A]DD 4 -1 34.425 0.0 0.0 3.1058 0.0 0.0 0.0 691.1962374322874 691.1962374322874 20.929862658764264 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]DD 3.1058 + + 166 + 1 1.756 61787.0 0.4799999892711639 1035 4900 5935 SUDHL4_400M_050219_2,5937 SUDHL4_400M_050219_2,5937,AIDDCNQTDD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5940 28.808 409.0 195120.0 25 0 25101.0 + 18891 LAVDPNRAV 9 90 477.77189716474896 953.529241396298 2 477.7723266482353 MULTI CID FTMS 0 0 0 5939 132811.734375 0.3514546170238982 -15 0.3868446350097656 1 Unmodified _LAVDPNRAV_ ENSG00000048162|ENST00000614830|NOP16;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;ENST00000510608.1_1_5:175813700-175815552:-|nuORF;nc|ENSG00000048162|Q9Y3C1-2|NOP16;nc|ENSG00000048162|Q9Y3C1-3|NOP16 34.40172386719151 0.1061884637610825 6 {I|L}AVDP 5 4 63.928 0.0 0.0 6.7043 0.0 0.0 0.0 455.2318819635376 455.2318819635376 42.501225267834 0.0 0.0 0.0 0 1.3494850021680094 1.6989700043360187 0.0 0.0 + {I|L}AVDP 6.7043 + + 157 + 1 1.756 65628.5 1.0 1036 4902 5939 SUDHL4_400M_050219_2,5940 SUDHL4_400M_050219_2,5940,LAVDPNRAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5946 28.837 563.0 124110.0 25 0 13926.0 2401 AQPNGDWTY 9 106 526.2272714415157 1050.4399899498312 2 526.2270385622978 MULTI CID FTMS 0 0 0 5945 52948.421875 0.5517231891260662 1 -0.0145187377929687 1 Unmodified _AQPNGDWTY_ ENSG00000242574|ENST00000418107|HLA-DMB;ENST00000498020.1_1_6:32904922-32905177:-|nuORF 16.942295170755138 0.3780752226737986 6 [AG]GPQG 6 7 28.109 0.0 0.0 2.6759 0.0 0.0 0.0 580.2040945243031 580.2040945243031 10.661837734644587 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.6505149978319906 [AG]GPQG 2.6759 - 438 1 1.756 60042.2 1.0 1037 4907 5945 SUDHL4_400M_050219_2,5946 SUDHL4_400M_050219_2,5946,AQPNGDWTY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5947 28.839 96.0 562300.0 25 0 90298.0 + 3135 AVPPALRGP 9 60 439.266509429665 876.51846592613 2 440.2690612673759 MULTI CID FTMS 0 0 0 5945 237206.359375 0.4894794152224249 -10 0.0980377197265625 2 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 11.640296217721598 0.521594087909532 6 PP 2 -1 10.969 0.0 0.0 1.2514 0.0 0.0 169.10356573911594 510.28687463931874 679.3904403784347 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 1.2514 + + 20 + 1 1.756 47774.1 1.0 1038 4907 5945 SUDHL4_400M_050219_2,5947 SUDHL4_400M_050219_2,5947,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5951 28.859 572.0 115790.0 25 0 7122.1 + -1 SLLMFFTI 8 114 494.26555964978337 986.5165663663668 2 494.2657043337822 MULTI CID FTMS 0 0 0 5950 80519.703125 0.8605965203300829 -1 0.0040645599365234 1 Oxidation (M) _SLLM(Oxidation (M))FFTI_ REV__ENSG00000104059|ENST00000261275|ENTREP2 19.438996006549623 0.6237395211498085 6 N{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L} 6 -1 25.098 0.0 0.0 2.5441 0.0 0.0 232.14579632257568 0.0 232.14579632257568 0.0 11.602737437457629 0.0 0.0 0 0.5 0.0 0.5994850021680094 0.0 N{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L} 2.5441 - 516 + 1 1.756 55145.8 1.0 1039 4910 5950 SUDHL4_400M_050219_2,5951 SUDHL4_400M_050219_2,5951,SLLMFFTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5956 28.878 204.0 224090.0 25 0 29290.0 + 23092 LSMEPLAF 8 73 454.2352728007568 906.4559926683136 2 454.2349120974541 MULTI CID FTMS 0 0 0 5955 172188.953125 0.383927635755945 15 -0.2486743927001953 1 Unmodified _LSMEPLAF_ REV__ENSG00000133958|ENST00000695012|UNC79;REV__nc|ENSG00000133958|Q9P2D8-2|UNC79;REV__nc|ENSG00000133958|Q9P2D8-3|UNC79;REV__nc|ENSG00000133958|Q9P2D8|UNC79 19.438996006549623 0.6237395211498085 6 A{M(Oxidation (M))|F} 2 -1 26.454 0.0 0.0 2.9184 0.0 0.0 670.3404511417496 0.0 670.3404511417496 0.0 26.453650195120844 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 A{M(Oxidation (M))|F} 2.9184 + + 20 + 1 1.756 41701.1 1.0 1040 4914 5955 SUDHL4_400M_050219_2,5956 SUDHL4_400M_050219_2,5956,LSMEPLAF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5957 28.892 800.0 154990.0 25 0 10511.0 -1 AMRPGLEGY 9 144 505.2416537417825 1008.468754550365 2 505.2423889040947 MULTI CID FTMS 0 0 0 5955 74473.546875 0.6877401831268057 2 -0.0325584411621093 2 Oxidation (M) _AM(Oxidation (M))RPGLEGY_ ENSG00000100297|ENST00000216122|MCM5 26.268140514670165 0.1969607489560049 6 {[QN]|[E{I|L}]|[KN]}[YV]HEGY 8 -1 + 43.14 0.0 0.0 4.2778 4.2778 84.004 0.0 0.0 0.0 3.543031117331949 24.952359395051715 3.543031117331949 10.286596949921218 0 1.305462187404089 0.6989700043360187 0.3252574989159953 0.0 {[QN]|[E{I|L}]|[KN]}[YV]HEGY;{[QN]|[E{I|L}]|[KN]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}HGY;{[QN]|[E{I|L}]|[KN]}[YV]HWY;{[MS]|[{M(Oxidation (M))|F}A]}R[PG]{I|L}EGY;{[MS]|[{M(Oxidation (M))|F}A]}R{I|L}[PG]EGY;[KP]C(Carbamidomethyl (C))[KQ]EGY;{[TV]|[{I|L}S]}[QA]S{M(Oxidation (M))|F}HGY;[PG]R[WH]HGY;[KP]{[CA]|SS}S{M(Oxidation (M))|F}HGY;{[VA]|[{I|L}G]}{[QS]|[NT]}T{M(Oxidation (M))|F}HGY 4.2778;3.2577;3.1464;2.8357;2.6986;2.4861;2.349;2.2661;2.2154;2.0693 -;-;-;+;-;-;-;-;-;- + 786 1 1.756 96468.2 0.449999988079071 1041 4914 5955 SUDHL4_400M_050219_2,5957 SUDHL4_400M_050219_2,5957,AMRPGLEGY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5958 28.895 189.0 376200.0 25 0 170130.0 8966 FAPADIPV 8 66 415.22641606766666 828.4382792021333 2 415.2266113162041 MULTI CID FTMS 0 0 0 5955 223208.375 0.4412836285122385 -12 0.0733184814453125 3 Unmodified _FAPADIPV_ ENSG00000161692|ENST00000315005|DBF4B 2.889219685676258 0.8067950007271085 6 {I|L} 1 7 9.8329 0.0 0.0 1.1869 0.0 0.0 697.343413334749 0.0 697.343413334749 0.0 7.843181179205061 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1869 + + 7 + 1 1.756 60957.5 1.0 1042 4914 5955 SUDHL4_400M_050219_2,5958 SUDHL4_400M_050219_2,5958,FAPADIPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5959 28.9 247.0 256690.0 25 0 81420.0 38685 TTLTAAEVGI 10 71 488.2706231834141 974.526693433628 2 488.2686035037041 MULTI CID FTMS 0 0 0 5955 180770.9375 0.4430327008186118 -7 0.0472126007080078 4 Unmodified _TTLTAAEVGI_ ENSG00000163029|ENST00000448223|SMC6;nc|ENSG00000163029|Q96SB8-2|SMC6 13.90604991867851 0.6142120002215601 6 PS{I|L} 3 9 20.15 0.0 0.0 2.0677 0.0 0.0 659.3472938748375 0.0 659.3472938748375 0.0 8.891252645201781 0.0 0.0 0 0.5 0.0 0.0 0.0 PS{I|L} 2.0677 - 47 + 1 1.756 56861.0 1.0 1043 4914 5955 SUDHL4_400M_050219_2,5959 SUDHL4_400M_050219_2,5959,TTLTAAEVGI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5962 28.921 800.0 117550.0 25 0 17302.0 + -1 LQYPDTNMDFY 11 99 711.7993206605114 1421.5840883878227 2 711.8008911013603 MULTI CID FTMS 0 0 0 5961 104284.6953125 0.070798253961007 -13 0.0960330963134765 1 Oxidation (M) _LQYPDTNM(Oxidation (M))DFY_ REV__ENSG00000137573|ENST00000402687|SULF1;REV__ENST00000521946.5_1_8:70505207-70554528:+|nuORF;REV__ENST00000530674.1_1_8:70550702-70570767:+|nuORF 12.240655878213236 0.7805268987462184 6 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y 13 -1 + 100.08 0.0 0.0 7.0401 7.0401 85.636 0.0 0.0 0.0 9.603189178034768 11.448658907276354 9.603189178034768 3.6317790241282495 0 1.3182503180159344 1.154901959985743 1.3807196863200843 1.174742501084005 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEQAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGAQAD{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGADQA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGA[AG]DA{M(Oxidation (M))|F}Y;{[DA]|[EG]}[AG]HEAGAQDA{M(Oxidation (M))|F}Y;[QA]HDEAGAQDA{M(Oxidation (M))|F}Y;[QA]DHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQQAD{M(Oxidation (M))|F}Y 7.0401;6.7846;6.5729;6.4757;6.4057;6.4019;6.4019;6.3646;6.3305;6.2202 -;-;-;-;-;-;-;-;-;- 3735 1 1.756 71321.0 0.4399999976158142 1044 4916 5961 SUDHL4_400M_050219_2,5962 SUDHL4_400M_050219_2,5962,LQYPDTNMDFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5963 28.934 800.0 117280.0 25 0 7498.2 + -1 ELSLNYMAL 9 132 535.2675713412365 1068.5205897492729 2 535.2675659060478 MULTI CID FTMS 0 0 0 5961 99176.0390625 0.9202498590215242 -8 0.0652523040771484 2 Oxidation (M) _ELSLNYM(Oxidation (M))AL_ REV__ENSG00000149474|ENST00000688188|KAT14;REV__nc|ENSG00000149474|Q9H8E8-2|KAT14;REV__nc|ENSG00000149474|Q9H8E8|KAT14 26.88365393820708 0.1891292719743517 6 QDT[WK]A{I|L} 7 -1 44.649 0.0 0.0 4.1786 0.0 0.0 208.0835913135291 0.0 208.0835913135291 0.0 34.19154706719014 0.0 0.0 0 1.6307196863200843 0.0 0.3494850021680094 0.6109243748081782 QDT[WK]A{I|L} 4.1786 - 589 + 1 1.756 78502.7 0.5 1045 4916 5961 SUDHL4_400M_050219_2,5963 SUDHL4_400M_050219_2,5963,ELSLNYMAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5965 28.948 646.0 91669.0 25 0 7743.1 + 44150 YLDPAQRGV 9 101 509.7693674528877 1017.5241819725752 2 509.7693359255791 MULTI CID FTMS 0 0 0 5964 29068.154296875 0.0090354486847878 31 -0.3829975128173828 1 Unmodified _YLDPAQRGV_ ENSG00000130731|ENST00000301686|METTL26;ENST00000448973.6_1_16:685849-686290:-|nuORF;nc|ENSG00000130731|Q96S19-2|METTL26;nc|ENSG00000130731|Q96S19-3|METTL26;nc|ENSG00000130731|Q96S19-4|METTL26;nc|ENSG00000130731|Q96S19-5|METTL26;nc|ENSG00000130731|Q96S19-6|METTL26 19.256988751693697 0.3154191944385105 6 [Y{I|L}]DP 4 5 37.792 0.0 0.0 3.7141 0.0 0.0 0.0 526.2714327447874 526.2714327447874 14.286662482156345 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + [Y{I|L}]DP 3.7141 + + 107 + 1 1.756 48842.9 1.0 1046 4917 5964 SUDHL4_400M_050219_2,5965 SUDHL4_400M_050219_2,5965,YLDPAQRGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5966 28.962 800.0 171110.0 25 0 15455.0 + 1960 AMPPPPPQGV 10 143 503.7555795449998 1005.4966061567995 2 503.7545349001884 MULTI CID FTMS 0 0 0 5964 96934.1796875 0.4977752599307921 -37 0.6645565032958984 2 Oxidation (M) _AM(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 61.357469665136826 0.0330252915653943 6 {[MS]|[{M(Oxidation (M))|F}A]}PPPPPQGV 10 0 + 39.324 0.0 0.0 3.9109 3.9109 79.993 0.0 0.0 0.0 6.532125137753432 8.913749774181817 6.532125137753432 8.913749774181817 0 1.274227503252014 0.0 0.0 0.3252574989159953 + + {[MS]|[{M(Oxidation (M))|F}A]}PPPPPQGV;{[QD]|[EN]|[WG]|[KD]|[RS]}[VG]PPPP{[CP]|[EA]};[KP]{[CA]|SS}PPPP{[CP]|[EA]};{[TV]|[{I|L}S]}[QA]PPPP{[CP]|[EA]};{[VA]|[{I|L}G]}[QT]PPPP{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}PPPP[VG]QP;{[MS]|[{M(Oxidation (M))|F}A]}PPPPP[AG]GV;{[MS]|[{M(Oxidation (M))|F}A]}PP[YK]QGV;{[MS]|[{M(Oxidation (M))|F}A]}P[YK]PQGV;{[MS]|[{M(Oxidation (M))|F}A]}[YK]PPQGV 3.9109;3.0244;2.8514;2.848;2.8429;2.7009;2.6759;1.5969;1.5461;1.4979 +;-;-;-;-;-;-;-;-;- + 806 + 1 1.756 108089.0 0.4699999988079071 1047 4917 5964 SUDHL4_400M_050219_2,5966 SUDHL4_400M_050219_2,5966,AMPPPPPQGV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5967 28.976 800.0 114760.0 25 0 4755.2 + + 27356 RLMNDMTAV 9 127 541.752201392814 1081.4898498524278 2 541.7521240115166 MULTI CID FTMS 0 0 0 5964 91414.4296875 0.5835107146917843 -4 0.0668315887451171 3 Unmodified _PHTYTYMAV_ nc|ENSG00000120694|Q92598-4|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1 36.04419817259434 0.0971720506436186 6 YATTDN{NN|[MP]|[D{I|L}]|[EV]}AV 10 -1 + 50.953 0.0 0.0 4.7114 4.7114 75.416 0.0 0.0 0.0 1.5629594754377507 1.5629594754377507 1.5629594754377507 1.5629594754377507 0 0.8494850021680094 0.0 1.055462187404089 0.0 YATTDN{NN|[MP]|[D{I|L}]|[EV]}AV;[R{I|L}]{M(Oxidation (M))|F}NDT{M(Oxidation (M))|F}AV;[R{I|L}]{M(Oxidation (M))|F}ND{M(Oxidation (M))|F}TAV;[R{I|L}]TC(Carbamidomethyl (C))DT{M(Oxidation (M))|F}AV;[R{I|L}]TC(Carbamidomethyl (C))D{M(Oxidation (M))|F}TAV;YATTDC(Carbamidomethyl (C))RPV;YATTDGG{NN|[MP]|[D{I|L}]|[EV]}AV;[R{I|L}]{M(Oxidation (M))|F}GGDT{M(Oxidation (M))|F}AV;[R{I|L}]{M(Oxidation (M))|F}GGD{M(Oxidation (M))|F}TAV;[{I|L}T]RC(Carbamidomethyl (C))DT{M(Oxidation (M))|F}AV 4.7114;4.5669;4.4725;4.0102;3.9158;3.8939;3.864;3.7154;3.6211;3.569 -;-;-;-;-;-;-;-;-;- 803 + 1 1.756 75260.4 0.4799999892711639 1048 4917 5964 SUDHL4_400M_050219_2,5967 SUDHL4_400M_050219_2,5967,PHTYTYMAV False False RLMNDMTAV 28.975807 541.752124011517 23645090.0 5964.0 nc|ENSG00000120694|Q92598-4|HSPH1;;nc|ENSG00000120694|Q92598-2|HSPH1;;ENSG00000120694|ENST00000320027|HSPH1;;nc|ENSG00000120694|Q92598-3|HSPH1 8.406413873036703 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5968 28.99 800.0 63976.0 25 0 4403.7 -1 KLEQAQEMMK 10 94 634.3028566188704 1266.5911603045406 2 634.3024780154228 MULTI CID FTMS 0 0 0 5964 99863.6640625 1.0 0 0.0 4 2 Oxidation (M) _KLEQAQEM(Oxidation (M))M(Oxidation (M))K_ ENSG00000164440|ENST00000358430|TXLNB 29.84058131909904 0.2982332456971691 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 46.15 0.0 0.0 3.6437 3.6437 79.674 0.0 0.0 0.0 2.2969624387961503 31.546153208173777 2.2969624387961503 9.164539485499247 0 0.8979400086720376 0.0 1.1307196863200843 0.0 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QC[PG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]EKEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QC[QP]{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[AG]C[PG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]EKE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}G[HK][KS]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 3.6437;2.9201;2.9201;2.8576;2.5748;2.3384;2.1994;2.1369;1.8512;1.832 -;-;-;-;-;-;-;-;-;- 706 1 1.756 48062.7 0.4900000095367431 1049 4917 5964 SUDHL4_400M_050219_2,5968 SUDHL4_400M_050219_2,5968,KLEQAQEMMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5971 28.998 21.0 2632100.0 25 0 424090.0 -1 RMLPHAPGV 9 55 497.2683880185765 992.5222231039528 2 497.2686340212822 MULTI CID FTMS 0 0 0 5970 2762810.25 0.5383754268033892 -9 0.1468486785888672 1 Oxidation (M) _RM(Oxidation (M))LPHAPGV_ ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;ENST00000471488.1_1_1:32797142-32797421:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2 16.942295170755138 0.3780752226737986 6 KAPR 4 -1 26.242 0.0 0.0 2.644 0.0 0.0 522.2411976544937 0.0 522.2411976544937 0.0 20.300084529637985 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.0 KAPR 2.644 - 65 1 1.756 51155.1 1.0 1050 4919 5970 SUDHL4_400M_050219_2,5971 SUDHL4_400M_050219_2,5971,RMLPHAPGV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5972 29.012 800.0 149320.0 25 0 26206.0 + -1 DNCFMARFY 9 104 612.2515112194337 1222.4884695056674 2 612.2523071169853 MULTI CID FTMS 0 0 0 5970 161201.125 0.4109743339619588 -13 0.1733837127685547 2 Carbamidomethyl (C) _DNC(Carbamidomethyl (C))FMARFY_ REV__ENSG00000114796|ENST00000242810|KLHL24;REV__ENSG00000172578|ENST00000341319|KLHL6;REV__ENST00000489245.5_1_3:183211997-183273441:-|nuORF;REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24 28.486842064014134 0.1687311288560894 6 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 -1 + 109.84 0.0 0.0 8.9851 8.9851 92.285 0.0 0.0 0.0 7.269987279362624 87.80688916825156 7.269987279362624 8.45098040014257 0 1.0 0.0 2.129854553292708 1.4386218330464624 [HD]EAQQDA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQW{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQ[AG]DA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQWGA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HA[AG]QDA{M(Oxidation (M))|F}Y;[HD]EAQ{[DA]|[EG]}GA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQ[AG]W{M(Oxidation (M))|F}Y 8.9851;8.2938;8.2354;8.0394;7.7594;7.5441;7.3887;7.3481;7.3303;7.0062 -;-;-;-;-;-;-;-;-;- 1990 1 1.756 94799.8 0.6000000238418579 1051 4919 5970 SUDHL4_400M_050219_2,5972 SUDHL4_400M_050219_2,5972,DNCFMARFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 5973 29.018 307.0 295270.0 25 0 35440.0 + 43584 YADVGGKQF 9 99 492.7430189691612 983.4714850051224 2 492.7433044314384 MULTI CID FTMS 0 0 0 5970 103747.078125 0.073860498417561 -14 0.1774425506591797 3 Unmodified _YADVGGKQF_ ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF 47.74868867922204 0.0453060283459952 6 YADVNKQ{M(Oxidation (M))|F} 8 2 + 72.063 0.0 0.0 7.3274 7.3274 83.094 0.0 0.0 0.0 29.9311534588334 7.0546874062760025 7.0546874062760025 1.3033376849500655 0 0.9247425010840048 2.0 0.0 0.3252574989159953 YADVNKQ{M(Oxidation (M))|F};YADVGGKQ{M(Oxidation (M))|F};YADVNK[AG]{M(Oxidation (M))|F};YADVGGK[AG]{M(Oxidation (M))|F};YA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KA]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7.3274;7.1949;6.0549;5.9278;3.8256 -;+;-;-;- + 679 + 1 1.756 75973.0 1.0 1052 4919 5970 SUDHL4_400M_050219_2,5973 SUDHL4_400M_050219_2,5973,YADVGGKQF True True YADVGGKQF 29.017927 492.743304431438 11618469.0 5970.0 ENST00000485612.5_1_X:153061851-153063885:+|nuORF;;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;;ENSG00000180879|ENST00000370086|SSR4 7.428256034851074 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5976 29.038 800.0 103140.0 25 0 11361.0 20120 LKITREDSL 9 84 537.8113102225499 1073.6080675118997 2 537.8112060427666 MULTI CID FTMS 0 0 0 5975 89131.3828125 0.2390497973292875 8 -0.0982780456542968 1 Unmodified _LKITREDSL_ ENSG00000074054|ENST00000696935|CLASP1;ENST00000472776.1_1_2:122122630-122145458:-|nuORF;nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1 57.24910588100465 0.0276051374632116 6 K{I|L}{I|L}D 4 6 61.983 0.0 0.0 5.7733 0.0 0.0 0.0 601.2932222955686 601.2932222955686 29.40252967303381 0.0 0.0 0.0 0 1.274227503252014 1.0 0.7302046884880937 0.0 K{I|L}{I|L}D 5.7733 - 48 + 1 1.756 66270.0 0.5400000214576721 1053 4921 5975 SUDHL4_400M_050219_2,5976 SUDHL4_400M_050219_2,5976,LKITREDSL True True KLIDRTESL 29.038373 537.811206042767 3539567.0 5975.0 ENSG00000130592|ENST00000311604|LSP1;;nc|ENSG00000130592|P33241-3|LSP1;;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;;nc|ENSG00000130592|P33241-2|LSP1 4.170702298482259 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5981 29.061 430.0 237500.0 25 0 27621.0 + 18892 LAVDPNRAV 9 96 477.77189716474896 953.529241396298 2 477.7718078494072 MULTI CID FTMS 0 0 0 5980 182780.734375 0.4836856720636624 8 -0.1013336181640625 1 Unmodified _LAVDPNRAV_ ENSG00000048162|ENST00000614830|NOP16;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;ENST00000510608.1_1_5:175813700-175815552:-|nuORF;nc|ENSG00000048162|Q9Y3C1-2|NOP16;nc|ENSG00000048162|Q9Y3C1-3|NOP16 29.081581746732265 0.1611639662936252 6 {I|L}AVD 4 5 61.983 0.0 0.0 6.5003 0.0 0.0 0.0 552.2900230638973 552.2900230638973 39.93115345883339 0.0 0.0 0.0 0 1.305462187404089 1.6989700043360187 0.0 0.0 + {I|L}AVD 6.5003 + + 81 + 1 1.756 85111.8 1.0 1054 4925 5980 SUDHL4_400M_050219_2,5981 SUDHL4_400M_050219_2,5981,LAVDPNRAV False True LAVDPNRAV 29.060596 477.771807849407 4277550.0 5980.0 ENST00000510608.1_1_5:175813700-175815552:-|nuORF;;ENSG00000048162|ENST00000614830|NOP16;;nc|ENSG00000048162|Q9Y3C1-2|NOP16;;ENST00000504821.1_1_5:175813909-175815568:-|nuORF;;nc|ENSG00000048162|Q9Y3C1-3|NOP16 6.273361841837565 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5982 29.074 800.0 73818.0 25 0 11669.0 -1 YKCEQCRMAF 10 98 676.2811585010517 1350.5477640689032 2 676.2807494997978 MULTI CID FTMS 0 0 0 5980 82099.3515625 0.8419359488130178 -5 0.0324745178222656 2 Carbamidomethyl (C),Oxidation (M) _YKC(Carbamidomethyl (C))EQCRM(Oxidation (M))AF_ ENSG00000171970|ENST00000306908|ZNF57 18.1463463914782 0.5430639438673815 6 [AG][HD]EAQQDA{M(Oxidation (M))|F}Y 12 -1 + 67.7 0.0 0.0 5.0128 5.0128 83.606 0.0 0.0 0.0 2.2084067988340195 31.70802753772199 2.2084067988340195 9.098233696509126 0 1.1237125054200234 1.0457574905606752 1.7803695511246982 1.7302046884880935 [AG][HD]EAQQDA{M(Oxidation (M))|F}Y;[AG][HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;[AG][HD]EA[AG]QDA{M(Oxidation (M))|F}Y;[C(Carbamidomethyl (C))H][DP]AQQW{M(Oxidation (M))|F}Y;{[SA]|[TG]}[HN][NG]QQW{M(Oxidation (M))|F}Y;[C(Carbamidomethyl (C))H][WP]QQDA{M(Oxidation (M))|F}Y;[C(Carbamidomethyl (C))H][DP]AQ[AG]W{M(Oxidation (M))|F}Y;[C(Carbamidomethyl (C))H]Q[WP]QDA{M(Oxidation (M))|F}Y;[C(Carbamidomethyl (C))H][DP]A[AG]QW{M(Oxidation (M))|F}Y;[AG][C(Carbamidomethyl (C))H][WP]QDA{M(Oxidation (M))|F}Y 5.0128;4.3391;4.0572;3.7372;3.7013;3.1762;3.0586;3.0459;2.7767;2.6368 -;-;-;-;-;-;-;-;-;- 1325 1 1.756 49752.5 0.4199999868869781 1055 4925 5980 SUDHL4_400M_050219_2,5982 SUDHL4_400M_050219_2,5982,YKCEQCRMAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5985 29.092 637.0 141540.0 25 0 10571.0 + 12257 GQYPTQPTY 9 126 527.7454894719127 1053.4764260106251 2 527.7453491091728 MULTI CID FTMS 0 0 0 5984 160206.765625 0.4898271335994286 2 -0.0417747497558593 1 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 43.85829265575387 0.0542763391141878 6 [TP]QY[TP]Y{[QG]|[NA]} 9 6 + 39.733 0.0 0.0 3.7716 3.7716 78.62 0.0 0.0 0.0 10.932656570982807 6.980071641894206 6.980071641894206 7.380770024155318 0 0.0 1.2218487496163564 1.3411290632962718 0.0 [TP]QY[TP]Y{[QG]|[NA]};[TP]YQ[TP]Y{[QG]|[NA]};[TP][AG]Y[TP]Y{[QG]|[NA]};[QP]TY[TP]Y{[QG]|[NA]};[AG]PTY[TP]Y{[QG]|[NA]};[TP]Y[AG][TP]Y{[QG]|[NA]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TQ[TP]Y{[QG]|[NA]};[AG]TPY[TP]Y{[QG]|[NA]};[QT]PY[TP]Y{[QG]|[NA]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}T[AG][TP]Y{[QG]|[NA]} 3.7716;3.071;2.8975;2.7338;2.6512;2.1969;2.1952;2.1432;1.3392;1.3211 -;-;-;-;-;-;-;-;-;- 526 1 1.756 77219.9 1.0 1056 4927 5984 SUDHL4_400M_050219_2,5985 SUDHL4_400M_050219_2,5985,GQYPTQPTY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5987 29.097 46.0 1343300.0 25 0 268190.0 2139 APVPAPGRL 9 68 439.266509429665 876.51846592613 2 439.2663146853447 MULTI CID FTMS 0 0 0 5986 1236818.25 0.3732807172630428 13 -0.123178482055664 1 Unmodified _APVPAPGRL_ ENST00000256509.6_1_3:238430-286315:+|nuORF;ENST00000427688.5_1_3:238592-361403:+|nuORF 11.640296217721598 0.521594087909532 6 {[VA]|[{I|L}G]}PPA 5 5 42.218 0.0 0.0 4.8166 0.0 0.0 0.0 438.2469576471313 438.2469576471313 29.28666248215634 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.8166 - 39 + 1 1.756 52703.2 1.0 1057 4928 5986 SUDHL4_400M_050219_2,5987 SUDHL4_400M_050219_2,5987,APVPAPGRL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 5988 29.106 519.0 198740.0 25 0 21182.0 37541 TLHPVWSQQ 9 113 548.2829519693347 1094.551351005469 2 548.2834350466728 MULTI CID FTMS 0 0 0 5986 138190.296875 0.1799566786057489 -17 0.2327537536621093 2 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 19.62595529434964 0.305431704817896 6 EHPPEH[HK] 8 7 54.344 0.0 0.0 4.9649 0.0 0.0 85.08983809638828 0.0 85.08983809638828 0.0 36.65409794332792 0.0 0.0 0 2.7134679910804405 0.0 0.7134679910804405 0.0 EHPPEH[HK] 4.9649 - 947 1 1.756 83381.2 1.0 1058 4928 5986 SUDHL4_400M_050219_2,5988 SUDHL4_400M_050219_2,5988,TLHPVWSQQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5989 29.12 800.0 104320.0 25 0 11083.0 + 15670 IQNPDITSSRY 11 87 647.3249608156896 1292.635368698179 2 647.3259155154228 MULTI CID FTMS 0 0 0 5986 116622.8515625 0.578627992249467 -13 0.1920719146728515 3 Unmodified _IQNPDITSSRY_ ENSG00000015285|ENST00000376701|WAS 51.487983226225225 0.1093896055713593 6 [DP]{I|L}WT{I|L}DPN 9 8 61.806 0.0 0.0 4.7814 0.0 0.0 0.0 238.11878232222253 238.11878232222253 45.48000610965907 0.0 0.0 0.0 0 1.0 0.8239087409443188 0.4247425010840047 0.4247425010840047 [DP]{I|L}WT{I|L}DPN 4.7814 - 416 1 1.756 70786.7 0.5199999809265137 1059 4928 5986 SUDHL4_400M_050219_2,5989 SUDHL4_400M_050219_2,5989,IQNPDITSSRY True True IQNPDITSSRY 29.120272 647.325915515423 1095757.875 5986.0 ENSG00000015285|ENST00000376701|WAS 5.715161005655925 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5992 29.13 132.0 417190.0 25 0 82932.0 + + -1 ASNDYTQQATQSYG 14 71 788.3310609460825 1574.647568958965 2 788.3318359255791 MULTI CID FTMS 0 0 0 5991 302261.21875 0.5441617693737635 -6 0.0779323577880859 1 Oxidation (M) _YSYM(Oxidation (M))RDYYDRQ_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 1.3295316138638542 0.8688751186870782 6 {[CP]|[EA]}[DN]YTQQA 9 -1 23.152 0.0 0.0 1.4703 0.0 0.0 0.0 551.21344863858 551.21344863858 4.42857185869514 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 1.1307196863200843 {[CP]|[EA]}[DN]YTQQA 1.4703 - 229 1 1.756 44886.0 1.0 1060 4930 5991 SUDHL4_400M_050219_2,5992 SUDHL4_400M_050219_2,5992,YSYMRDYYDRQ False False ASNDYTQQATQSYG 29.129537 788.331835925579 6161283.5 5991.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 6.567048072814941 2.0 False 14.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5993 29.132 123.0 345390.0 25 0 26664.0 + 8982 FASHVSPEV 9 72 486.7421751322575 971.469797331315 2 486.7425720095634 MULTI CID FTMS 0 0 0 5991 321613.375 0.9106977761605888 -3 0.0457763671875 2 Unmodified _FASHVSPEV_ ENSG00000242247|ENST00000263245|ARFGAP3;nc|ENSG00000242247|Q9NP61-2|ARFGAP3 50.855029805455786 0.0384952370514206 6 [{I|L}T]EAA 5 9 39.807 0.0 0.0 4.0976 0.0 0.0 0.0 483.203583323601 483.203583323601 21.874854021094947 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.7059771852360797 0.0 [{I|L}T]EAA 4.0976 - 174 1 1.756 38711.1 1.0 1061 4930 5991 SUDHL4_400M_050219_2,5993 SUDHL4_400M_050219_2,5993,FASHVSPEV True True FASHVSPEV 29.13207 486.742572009563 3106137.25 5991.0 nc|ENSG00000242247|Q9NP61-2|ARFGAP3;;ENSG00000242247|ENST00000263245|ARFGAP3 7.907704035441081 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 5994 29.14 476.0 154860.0 25 0 47798.0 -1 0 90 490.2846309987203 489.2773545321203 1 490.2830993533134 MULTI CID FTMS 0 0 0 5991 103459.3515625 0.1783904759174689 -25 0.308013916015625 3 6 {[QN]|[E{I|L}]|[KN]}[KT] 4 -1 + 15.272 0.0 0.0 3.1214 3.1214 77.054 0.0 0.0 0.0 0.6683417370659974 3.332498462979217 0.6683417370659974 7.468491798939108 0 0.0 0.958607314841775 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[KT];{[ET]|[MV]}K{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.1214;1.595;0.0089209 -;-;- 25 1 1.756 61443.3 1.0 1062 4930 5991 SUDHL4_400M_050219_2,5994 SUDHL4_400M_050219_2,5994, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 5997 29.152 248.0 190590.0 25 0 14529.0 + 31209 RLQESVMEA 9 82 539.7635385981572 1077.5125242631143 2 539.7643310427666 MULTI CID FTMS 0 0 0 5996 130222.5703125 0.1759176536186343 -12 0.1266307830810547 1 Oxidation (M) _RLQESVM(Oxidation (M))EA_ ENSG00000164754|ENST00000297338|RAD21 45.69961567697781 0.0497987121815769 6 ESV{M(Oxidation (M))|F}EA 6 3 40.422 0.0 0.0 3.7514 0.0 0.0 397.24412734199376 0.0 397.24412734199376 0.0 20.48117489773044 0.0 0.0 0 0.8466276367228139 0.0 0.805462187404089 0.0 + ESV{M(Oxidation (M))|F}EA 3.7514 + + 210 1 1.756 40109.6 1.0 1063 4932 5996 SUDHL4_400M_050219_2,5997 SUDHL4_400M_050219_2,5997,RLQESVMEA True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6000 29.161 43.0 988450.0 25 0 165390.0 -1 WRCSMAANTFY 11 61 711.7993206605114 1421.5840883878227 2 711.7998535037041 MULTI CID FTMS 0 0 0 5999 1162689.625 0.7893430105147102 5 -0.0432872772216796 1 Carbamidomethyl (C),Oxidation (M) _WRC(Carbamidomethyl (C))SM(Oxidation (M))AANTFY_ nc|ENSG00000183060|Q5XG99-2|LYSMD4 5.731851221503515 0.8481046878870278 6 [QA]DHAEQQDA{M(Oxidation (M))|F}Y 12 -1 + 68.727 0.0 0.0 4.8345 4.8345 56.727 0.0 0.0 0.0 0.6694678963061307 9.112365838923608 0.6694678963061307 0.0 0 1.3182503180159344 0.0 0.3494850021680094 0.4247425010840047 [QA]DHAEQQDA{M(Oxidation (M))|F}Y;[QA]DHEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHAEQQDA{M(Oxidation (M))|F}Y;[QA]HDAEQQDA{M(Oxidation (M))|F}Y;[QA]HDEAQQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHAEQQW{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQW{M(Oxidation (M))|F}Y;[QA]DHEAQ[AG]DA{M(Oxidation (M))|F}Y;[QA]DHAEQ[AG]DA{M(Oxidation (M))|F}Y 4.8345;4.8345;4.7874;4.7874;4.5546;4.5546;4.3223;4.3223;4.1945;4.1945 -;-;-;-;-;-;-;-;-;- 889 1 1.756 37088.2 1.0 1064 4934 5999 SUDHL4_400M_050219_2,6000 SUDHL4_400M_050219_2,6000,WRCSMAANTFY False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 6001 29.168 373.0 137440.0 25 0 27501.0 + 31253 RLTTSTSTF 9 94 507.26739135020927 1012.5202297672186 2 507.2665893435478 MULTI CID FTMS 0 0 0 5999 99549.53125 0.8129159727474353 -7 0.0773067474365234 2 Unmodified _RLTTSTSTF_ ENSG00000176171|ENST00000368636|BNIP3;ENST00000550043.1_1_14:28734103-28734340:+|nuORF 31.26834338654808 0.1333407332142048 6 STST{M(Oxidation (M))|F} 5 4 37.792 0.0 0.0 3.7324 0.0 0.0 471.2787647931656 0.0 471.2787647931656 0.0 20.80198135264581 0.0 0.0 0 0.5 0.0 0.7614393726401688 0.0 + STST{M(Oxidation (M))|F} 3.7324 + + 111 1 1.756 42747.9 1.0 1065 4934 5999 SUDHL4_400M_050219_2,6001 SUDHL4_400M_050219_2,6001,RLTTSTSTF False True RLTTSTSTF 29.167624 507.266589343548 471363.1875 5999.0 ENSG00000176171|ENST00000368636|BNIP3;;ENST00000550043.1_1_14:28734103-28734340:+|nuORF 4.596433162689209 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6006 29.185 154.0 495040.0 25 0 266100.0 23326 LTAPPPAY 8 57 415.22641606766666 828.4382792021333 2 415.2258788943291 MULTI CID FTMS 0 0 0 6005 413174.125 0.8168464874464016 12 -0.1457748413085937 1 Unmodified _LTAPPPAY_ ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-4|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A 2.889219685676258 0.8067950007271085 6 Y 1 7 12.474 0.0 0.0 1.5058 0.0 0.0 647.3645772751787 0.0 647.3645772751787 0.0 -6.989700043360188 -6.989700043360188 0.0 0 0.0 0.0 0.0 0.0 + Y 1.5058 + + 14 + 1 1.756 66833.4 1.0 1066 4938 6005 SUDHL4_400M_050219_2,6006 SUDHL4_400M_050219_2,6006,LTAPPPAY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6007 29.199 800.0 93616.0 25 0 7194.0 + -1 RLMAEDEEGY 10 92 614.7609858629719 1227.5074187927437 2 614.7615844607353 MULTI CID FTMS 0 0 0 6005 69718.5 0.6870608894113637 1 -0.0194301605224609 2 Oxidation (M) _RLM(Oxidation (M))AEDEEGY_ ENSG00000080503|ENST00000349721|SMARCA2;nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2 21.59015148037692 0.4836074274810599 6 AEDEEGY 7 -1 54.456 0.0 0.0 4.4363 0.0 0.0 416.21977431465 0.0 416.21977431465 0.0 29.53479493273172 0.0 0.0 0 1.0 0.0 0.0 0.0 AEDEEGY 4.4363 + + 115 1 1.756 61037.4 0.4900000095367431 1067 4938 6005 SUDHL4_400M_050219_2,6007 SUDHL4_400M_050219_2,6007,RLMAEDEEGY False False RLMAEDEEGY 29.199095 614.761584460735 401355.09375 6005.0 ENSG00000080503|ENST00000349721|SMARCA2;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4;;nc|ENSG00000080503|P51531-2|SMARCA2 5.079578081766765 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6009 29.211 549.0 181080.0 25 0 18336.0 + 1961 AMPPPPPQGV 10 127 503.7555795449998 1005.4966061567995 2 503.7542907595634 MULTI CID FTMS 0 0 0 6008 86769.609375 0.4455782779611602 -15 0.152750015258789 1 Oxidation (M) _AM(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 52.268347100219714 0.0668375294751462 6 {[MS]|[{M(Oxidation (M))|F}A]}PPPPPQGV 10 0 + 34.774 0.0 0.0 3.4583 3.4583 81.703 0.0 0.0 0.0 22.00931986690272 5.643817113300472 5.643817113300472 10.859146287065933 0 1.610924374808178 0.0 0.0 0.3494850021680094 + + {[MS]|[{M(Oxidation (M))|F}A]}PPPPPQGV;{[MS]|[{M(Oxidation (M))|F}A]}PPPPP[NG]{I|L};{[MS]|[{M(Oxidation (M))|F}A]}PPPPP[AG]GV;[QP]G[{I|L}T]PPP{[CP]|[EA]};[PG]AG[{I|L}T]PPP{[CP]|[EA]};[QP]{[TV]|[{I|L}S]}APPP{[CP]|[EA]};[PG]Q[{I|L}T]PPP{[CP]|[EA]};[PG]A{[TV]|[{I|L}S]}APPP{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}PP[YK]QGV;{[MS]|[{M(Oxidation (M))|F}A]}P[YK]PQGV 3.4583;2.3784;2.1993;2.0096;1.7899;1.7558;1.6104;1.536;1.3391;1.0936 +;-;-;-;-;-;-;-;-;- + 535 + 1 1.756 79753.9 1.0 1068 4939 6008 SUDHL4_400M_050219_2,6009 SUDHL4_400M_050219_2,6009,AMPPPPPQGV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6012 29.232 800.0 102720.0 25 0 5955.8 + -1 ELSLNYMAL 9 142 535.2675828446414 1068.5206127560828 2 535.2665283083916 MULTI CID FTMS 0 0 0 6011 77345.9765625 0.7084671987698501 -12 0.0950679779052734 1 Oxidation (M) _ELSLNYM(Oxidation (M))AL_ REV__ENSG00000149474|ENST00000688188|KAT14;REV__nc|ENSG00000149474|Q9H8E8-2|KAT14;REV__nc|ENSG00000149474|Q9H8E8|KAT14 28.486842064014134 0.1687311288560894 6 DT[WK]A{I|L} 6 -1 36.119 0.0 0.0 3.3803 0.0 0.0 336.14321432501475 0.0 336.14321432501475 0.0 23.45098040014257 0.0 0.0 0 1.424742501084005 0.0 0.4247425010840047 0.0 DT[WK]A{I|L} 3.3803 - 466 + 1 1.756 68153.3 0.4699999988079071 1069 4941 6011 SUDHL4_400M_050219_2,6012 SUDHL4_400M_050219_2,6012,ELSLNYMAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6013 29.246 800.0 111430.0 25 0 4072.4 -1 0 83 755.0382360816798 3016.123838460319 4 755.2886230349541 MULTI CID FTMS 0 0 0 6011 66191.0234375 0.5222658201380701 -4 0.0395736694335937 2 6 EET 3 -1 25.49 0.0 0.0 0.84511 0.0 0.0 2430.932018247232 223.03608118228752 2653.968099429519 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 EET 0.84511 - 312 + 1 1.756 67229.4 0.3799999952316284 1070 4941 6011 SUDHL4_400M_050219_2,6013 SUDHL4_400M_050219_2,6013, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6016 29.261 471.0 131540.0 25 0 23731.0 + -1 DNCFMARFY 9 77 612.2515112194337 1222.4884695056674 2 612.2520629763603 MULTI CID FTMS 0 0 0 6015 125820.3515625 0.3207727935041269 11 -0.2395591735839843 1 Carbamidomethyl (C) _DNC(Carbamidomethyl (C))FMARFY_ REV__ENSG00000114796|ENST00000242810|KLHL24;REV__ENSG00000172578|ENST00000341319|KLHL6;REV__ENST00000489245.5_1_3:183211997-183273441:-|nuORF;REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24 15.847184025352805 0.4077185912009129 6 [HD]EAQQDA{M(Oxidation (M))|F}Y 10 -1 + 90.75 0.0 0.0 7.4234 7.4234 91.279 0.0 0.0 0.0 7.269987279362624 83.76078152608656 7.269987279362624 9.164539485499262 0 1.0 0.0 1.110924374808178 0.8494850021680094 [HD]EAQQDA{M(Oxidation (M))|F}Y;[HD]EA[AG]QDA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]DA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]DA{M(Oxidation (M))|F}Y;{[SA]|[TG]}[{M(Oxidation (M))|F}E]HHW{M(Oxidation (M))|F}Y 7.4234;6.6738;6.6738;5.2322;2.0716 -;-;-;-;- 319 1 1.756 50033.4 1.0 1071 4943 6015 SUDHL4_400M_050219_2,6016 SUDHL4_400M_050219_2,6016,DNCFMARFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6017 29.268 415.0 159550.0 25 0 15959.0 -1 0 105 464.25058094856325 463.24330448196326 1 464.2511169314384 MULTI CID FTMS 0 0 0 6015 89210.4140625 0.634466307857816 -8 0.0819931030273437 2 6 {[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q 4 -1 + 36.585 0.0 0.0 7.8976 7.8976 94.58 0.0 0.0 0.0 1.848535256746743 1.848535256746743 1.848535256746743 11.568248020744306 0 0.7887254899964358 0.0 0.0 0.25 {[CT]|[{M(Oxidation (M))|F}G]}{I|L}Q;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[AG];{[CT]|[{M(Oxidation (M))|F}G]}AAV 7.8976;5.4004;2.5766 -;-;- 36 + 1 1.756 57173.9 1.0 1072 4943 6015 SUDHL4_400M_050219_2,6017 SUDHL4_400M_050219_2,6017, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6019 29.273 102.0 489030.0 25 0 80483.0 + 43585 YADVGGKQF 9 73 492.7430189691612 983.4714850051224 2 492.7428466677666 MULTI CID FTMS 0 0 0 6018 513301.9375 0.3654342621270785 11 -0.2686672210693359 1 Unmodified _YADVGGKQF_ ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF;ENST00000485612.5_1_X:153061851-153063885:+|nuORF 46.020951573049366 0.0490941689151868 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVNKQ{M(Oxidation (M))|F} 8 2 + 69.901 0.0 0.0 7.1076 7.1076 92.189 0.0 0.0 0.0 17.033099900742897 11.202817147792189 11.202817147792189 9.262137858390815 0 0.9247425010840048 2.0 0.0 0.5941876774005248 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVNKQ{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVGGKQ{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVNK[AG]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DAAAKQ{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DVGGK[AG]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AKQ{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DAAAK[AG]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}[QT]Q{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AK[AG]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D[{I|L}T][VS]{[ES]|[DT]|[{I|L}C]} 7.1076;6.1658;5.8552;5.4676;4.9189;4.3005;4.2207;3.2317;3.0481;2.8086 -;+;-;-;-;-;-;-;-;- + 532 + 1 1.756 46369.6 1.0 1073 4944 6018 SUDHL4_400M_050219_2,6019 SUDHL4_400M_050219_2,6019,YADVGGKQF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6020 29.281 421.0 269190.0 25 0 17439.0 -1 0 146 366.2278398725784 730.4411268119569 2 366.2277709841728 MULTI CID FTMS 0 0 0 6018 138257.109375 0.9068580276483188 -5 0.0688304901123046 2 6 [{I|L}P]HEK 5 -1 29.654 0.0 0.0 4.0597 0.0 0.0 0.0 123.09323936916785 123.09323936916785 16.98994824000197 0.0 0.0 0.0 0 0.4247425010840047 1.5228787452803376 0.0 0.0 [{I|L}P]HEK 4.0597 - 49 1 1.756 89114.8 1.0 1074 4944 6018 SUDHL4_400M_050219_2,6020 SUDHL4_400M_050219_2,6020, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6021 29.29 521.0 159410.0 25 0 18427.0 + 41041 VMINKATPY 9 121 526.7759927813885 1051.5374326295769 2 526.7765380740166 MULTI CID FTMS 0 0 0 6018 88838.765625 0.1945450091067638 -7 0.0921554565429687 3 Oxidation (M) _VM(Oxidation (M))INKATPY_ ENSG00000170906|ENST00000485876|NDUFA3 74.92900055777586 0.0191935851694334 6 [TP]Q{M(Oxidation (M))|F}KAT{M(Oxidation (M))|F}{I|L} 9 6 + 44.1 0.0 0.0 4.1939 4.1939 78.957 0.0 0.0 0.0 6.241757204421454 8.697114610913488 6.241757204421454 6.241757204421454 0 1.1549471895720984 0.8538719643217619 0.9731975075880328 0.0 [TP]Q{M(Oxidation (M))|F}KAT{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]{I|L}NKAT{M(Oxidation (M))|F}{I|L};{[QG]|[NA]}[KT]{I|L}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L};[TP][AG]{M(Oxidation (M))|F}KAT{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}AT{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L};{[QG]|[NA]}[K{I|L}]T{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KAT{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[TA]{I|L}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L};[{M(Oxidation (M))|F}V]{I|L}GGKAT{M(Oxidation (M))|F}{I|L};[QP]T{M(Oxidation (M))|F}KAT{M(Oxidation (M))|F}{I|L} 4.1939;3.6003;3.4014;3.3182;3.2311;2.9962;2.9166;2.8041;2.7246;2.7058 -;-;-;-;-;-;-;-;-;- 769 1 1.756 72112.5 1.0 1075 4944 6018 SUDHL4_400M_050219_2,6021 SUDHL4_400M_050219_2,6021,VMINKATPY True False VMINKATPY 29.289734 526.776538074017 4091528.25 6018.0 ENSG00000170906|ENST00000485876|NDUFA3 4.62710444132487 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6023 29.296 170.0 300600.0 25 0 33553.0 8027 ENELGITPV 9 82 486.25483819911295 970.495123465026 2 486.2534973025322 MULTI CID FTMS 0 0 0 6022 143627.703125 0.2597223678910533 86 -1.877347946166992 1 Unmodified _ENELGITPV_ ENSG00000135596|ENST00000358807|MICAL1;ENST00000456101.6_1_6:109766698-109772967:-|nuORF;ENST00000465904.1_1_6:109769379-109769610:-|nuORF;nc|ENSG00000135596|Q8TDZ2-2|MICAL1;nc|ENSG00000135596|Q8TDZ2-4|MICAL1 16.942295170755138 0.3780752226737986 6 [{I|L}T]E[TP]S 6 6 20.92 0.0 0.0 2.1556 0.0 0.0 0.0 339.17429761957595 339.17429761957595 5.435684192257995 0.0 0.0 0.0 0 0.0 2.0 0.3807196863200844 0.0 [{I|L}T]E[TP]S 2.1556 - 82 1 1.756 43720.2 1.0 1076 4945 6022 SUDHL4_400M_050219_2,6023 SUDHL4_400M_050219_2,6023,ENELGITPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6024 29.309 800.0 62317.0 25 0 6720.5 -1 0 58 1006.3817364345512 3016.1233799038537 3 1006.718066394329 MULTI CID FTMS 0 0 0 6022 65703.6953125 0.8298454635919564 3 -0.0276336669921875 2 6 C[DC]PPP 6 -1 13.901 0.0 0.0 0.46089 0.0 0.0 1907.6860762923288 493.24363123111567 2400.9297075234444 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C[DC]PPP 0.46089 - 31 + 1 1.756 39869.7 0.3600000143051147 1077 4945 6022 SUDHL4_400M_050219_2,6024 SUDHL4_400M_050219_2,6024, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6030 29.342 800.0 81668.0 25 0 3707.2 + -1 LNDLQDKMQF 10 97 634.3025305103047 1266.5905080874093 2 634.3022338747978 MULTI CID FTMS 0 0 0 6029 83737.84375 0.4996676634432491 -5 0.0357074737548828 1 Oxidation (M) _LNDLQDKM(Oxidation (M))QF_ REV__ENSG00000136634|ENST00000423557|IL10 27.628801355627647 0.3479284626772844 6 [AG]{I|L}KEEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 11 -1 + 50.201 0.0 0.0 3.9635 3.9635 80.101 0.0 0.0 0.0 8.79426068794151 8.966463911461041 8.79426068794151 8.79426068794151 0 1.2231975075880328 1.5228787452803376 0.75 0.3494850021680094 [AG]{I|L}KEEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KEEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[DN]QTA{I|L}{I|L}A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KEE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]VW[WR]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}{[SA]|[TG]}VEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[DN]QTA{I|L}{I|L}A{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q;[AG]VW{[MG]|[TS]}[PG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]V[TA]VEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[AG]{I|L}KEC[PG]AC[YR] 3.9635;3.2691;3.2555;3.2427;3.1172;2.7972;2.7594;2.7565;2.74;2.6551 -;-;-;-;-;-;-;-;-;- 989 1 1.756 55616.3 0.5099999904632568 1078 4950 6029 SUDHL4_400M_050219_2,6030 SUDHL4_400M_050219_2,6030,LNDLQDKMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6031 29.356 800.0 104880.0 25 0 8263.4 + -1 GQVKTGISM 9 138 468.7445533369642 935.4745537407284 2 468.7448303103447 MULTI CID FTMS 0 0 0 6029 96550.796875 1.0 0 0.0 2 Oxidation (M) _GQVKTGISM(Oxidation (M))_ ENSG00000168813|ENST00000355898|ZNF507;nc|ENSG00000168813|Q8TCN5-2|ZNF507 32.78568957990786 0.1150597335874693 6 {[TV]|[{I|L}S]}AK[VG]QS{M(Oxidation (M))|F} 9 -1 {[TV]|[{I|L}S]}AK[VG]Q + + 25.261 -7.0412 -1.0303 2.7003 2.7003 51.211 0.0 0.0 0.0 0.0 2.0609971201947985 0.0 0.0 0 0.3807196863200844 0.0 0.3494850021680094 0.0 {[TV]|[{I|L}S]}AK[VG]QS{M(Oxidation (M))|F} 2.7003 - 200 + 1 1.756 68031.2 0.4699999988079071 1079 4950 6029 SUDHL4_400M_050219_2,6031 SUDHL4_400M_050219_2,6031,GQVKTGISM False False GQVKTGISM 29.355633 468.744830310345 366217.25 6029.0 ENSG00000168813|ENST00000355898|ZNF507;;nc|ENSG00000168813|Q8TCN5-2|ZNF507 5.848963260650635 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6032 29.365 530.0 216590.0 25 0 23653.0 + 15938 ISYPSPYFGNQ 11 91 636.7962631360548 1271.5779733389095 2 636.7962524294853 MULTI CID FTMS 0 0 0 6029 115444.4765625 0.348813515584148 -3 0.0119438171386718 3 Unmodified _ISYPSPYFGNQ_ REV__ENSG00000153250|ENST00000348849|RBMS1;REV__nc|ENSG00000153250|P29558-2|RBMS1 27.22323531849824 0.4529927607131788 6 {[TV]|[{I|L}S]}YPGNSD 8 -1 65.909 0.0 0.0 5.1833 0.0 0.0 0.0 435.1998174263717 435.1998174263717 48.9541024909844 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.75 {[TV]|[{I|L}S]}YPGNSD 5.1833 - 550 + 1 1.756 87505.3 1.0 1080 4950 6029 SUDHL4_400M_050219_2,6032 SUDHL4_400M_050219_2,6032,ISYPSPYFGNQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6033 29.377 681.0 120820.0 25 0 16962.0 + 15619 IQEESLRTY 9 93 569.7896439148035 1137.564734896407 2 569.7903930544853 MULTI CID FTMS 0 0 0 6029 88101.8125 0.6689995267125052 -3 0.0119438171386718 4 Unmodified _IQEESLRTY_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 47.594388314883695 0.0456443387682827 6 {I|L}QEE{[TV]|[{I|L}S]}RTY 9 0 + 68.835 0.0 0.0 6.0511 6.0511 88.437 0.0 0.0 0.0 57.865612383257385 12.98332479720628 12.98332479720628 9.208187539523747 0 1.0 0.0 1.3494850021680094 0.4247425010840047 + + {I|L}QEE{[TV]|[{I|L}S]}RTY;{I|L}[AG]EE{[TV]|[{I|L}S]}RTY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ]{[QV]|[N{I|L}]|[RA]|[KV]}EQ{I|L};[QT][KQ][YT]EQ{I|L} 6.0511;5.2416;0.87855;0.20586 +;-;-;- + 121 + 1 1.756 65596.4 1.0 1081 4950 6029 SUDHL4_400M_050219_2,6033 SUDHL4_400M_050219_2,6033,IQEESLRTY True True IQEESLRTY 29.376802 569.790393054485 665502.8125 6029.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 5.56208062171936 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6035 29.381 103.0 647730.0 25 0 90940.0 -1 ELMTLAHKH 9 81 548.2829519693347 1094.551351005469 2 548.2827026247978 MULTI CID FTMS 0 0 0 6034 578565.6875 0.7534303191484599 6 -0.2064990997314453 1 Oxidation (M) _ELM(Oxidation (M))TLAHKH_ ENSG00000023734|ENST00000419869|STRAP;nc|ENSG00000023734|Q9Y3F4-2|STRAP 10.823927491677226 0.5436922275383211 6 SHPPEH[HK] 8 -1 39.346 0.0 0.0 3.5947 0.0 0.0 127.10037429023592 0.0 127.10037429023592 0.0 29.610403483680656 0.0 0.0 0 2.1989700043360187 0.0 0.7742275032520141 0.0 SHPPEH[HK] 3.5947 - 216 1 1.756 54932.3 1.0 1082 4951 6034 SUDHL4_400M_050219_2,6035 SUDHL4_400M_050219_2,6035,ELMTLAHKH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6036 29.383 96.0 652370.0 25 0 141930.0 + + 3136 APVPAPGRL 9 62 439.266509429665 876.51846592613 2 439.2662536501884 MULTI CID FTMS 0 0 0 6034 587321.75 0.1772579634106996 36 -0.4661121368408203 2 Unmodified _AVPPALRGP_ ENST00000427688.5_1_3:238592-361403:+|nuORF;ENST00000256509.6_1_3:238430-286315:+|nuORF 15.847184025352805 0.4077185912009129 6 {[VA]|[{I|L}G]}PPA 5 -1 43.768 0.0 0.0 4.9934 0.0 0.0 0.0 438.2483004205688 438.2483004205688 34.16386562212267 0.0 0.0 0.0 0 0.3054621874040891 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.9934 + + 20 + 1 1.756 53319.4 1.0 1083 4951 6034 SUDHL4_400M_050219_2,6036 SUDHL4_400M_050219_2,6036,AVPPALRGP False False APVPAPGRL 29.383437 439.266253650188 20465728.0 6034.0 ENST00000427688.5_1_3:238592-361403:+|nuORF;;ENST00000256509.6_1_3:238430-286315:+|nuORF 3.2738003730773926 2.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6037 29.389 327.0 241590.0 25 0 17182.0 + 1690 ALPEVQKQV 9 106 506.29588026042313 1010.5772075876464 2 506.2958557009697 MULTI CID FTMS 0 0 0 6034 183723.0625 0.551366576734471 -2 0.0551662445068359 3 Unmodified _ALPEVQKQV_ ENST00000405489.7_2_2:27435269-27435350:+|nuORF 43.85829265575387 0.0542763391141878 6 [{I|L}A]PEVQKQV 9 0 + 52.589 0.0 0.0 5.2039 5.2039 85.606 0.0 0.0 0.0 19.40163471084675 9.660191235302191 9.660191235302191 9.208187539523747 0 0.2887254899964357 2.0 0.0 0.9916440611282626 + + [{I|L}A]PEVQKQV;[{I|L}A]PEV[AG]KQV;[{I|L}A]PEVQK[AG]V;[{I|L}A]PEV[AG]K[AG]V;[KT][Y{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QV 5.2039;4.2927;3.9904;3.0836;0.43763 +;-;-;-;- + 468 + 1 1.756 67277.0 1.0 1084 4951 6034 SUDHL4_400M_050219_2,6037 SUDHL4_400M_050219_2,6037,ALPEVQKQV True True ALPEVQKQV 29.389364 506.296 1743346.0 6034.0 ENST00000405489.7_2_2:27435269-27435350:+|nuORF 7.326810995737712 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6038 29.4 593.0 94155.0 25 0 5474.6 + -1 RQFAAQTVGNTY 12 86 678.3384110251916 1354.662269117183 2 678.3383666872978 MULTI CID FTMS 0 0 0 6034 118949.8203125 1.0 0 0.0 4 Oxidation (M) _VKRKM(Oxidation (M))DQGNYT_ ENSG00000144224|ENST00000272638|UBXN4 22.65808497894818 0.560183898709508 6 AQTVGNTY 8 -1 61.191 0.0 0.0 4.517 0.0 0.0 502.26692397285314 0.0 502.26692397285314 0.0 30.64780966422425 0.0 0.0 0 1.1989700043360187 0.0 0.805462187404089 0.0 AQTVGNTY 4.517 - 403 1 1.756 45182.3 1.0 1085 4951 6034 SUDHL4_400M_050219_2,6038 SUDHL4_400M_050219_2,6038,VKRKMDQGNYT False False RQFAAQTVGNTY 29.39976 678.338366687298 597337.4375 6034.0 ENSG00000144224|ENST00000272638|UBXN4 8.62518803278605 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6040 29.417 800.0 61621.0 25 0 11346.0 + -1 YSYMRDYYDRQ 11 74 788.3310609460825 1574.647568958965 2 788.8323852419853 MULTI CID FTMS 0 0 0 6039 76685.40625 0.1674730365485417 13 -0.2829227447509765 1 Oxidation (M) _YSYM(Oxidation (M))RDYYDRQ_ REV__ENSG00000092199|ENST00000553300|HNRNPC;REV__ENST00000556181.1_1_14:58988169-58988316:+|nuORF;REV__nc|ENSG00000092199|P07910-3|HNRNPC;REV__nc|ENSG00000092199|P07910-4|HNRNPC;REV__nc|ENSG00000092199|P07910|HNRNPC 1.3295316138638542 0.8688751186870782 6 {[WT]|[RM]}AAA 5 -1 21.708 0.0 0.0 1.3786 0.0 0.0 0.0 1071.3641260914244 1071.3641260914244 6.49166239860314 0.0 0.0 0.0 0 0.0 0.0 0.9489700043360187 0.0 {[WT]|[RM]}AAA 1.3786 - 113 1 1.737 40314.1 0.5 1086 4952 6039 SUDHL4_400M_050219_2,6040 SUDHL4_400M_050219_2,6040,YSYMRDYYDRQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6041 29.422 282.0 419620.0 25 0 74390.0 + 1323 AIVVGGKG 8 92 350.7213140513034 699.4280751694068 2 350.7210876345634 MULTI CID FTMS 0 0 0 6039 250035.234375 0.1293247873117159 -3 0.0780315399169921 2 Unmodified _AIVVGGKG_ REV__ENSG00000188011|ENST00000343216|RTP5;REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF 13.50788311687929 0.7113601687236069 6 A{I|L}{I|L}EVR 6 -1 + 68.18 0.0 0.0 9.748 9.748 96.904 0.0 0.0 0.0 61.1902574212224 14.714672415332792 14.714672415332792 14.477437731477425 0 0.4247425010840047 2.0 0.0 0.4247425010840047 A{I|L}{I|L}EVR;A{I|L}V{[QN]|[E{I|L}]|[KN]}R 9.748;7.6781 -;- 67 + 1 1.737 94843.1 1.0 1087 4952 6039 SUDHL4_400M_050219_2,6041 SUDHL4_400M_050219_2,6041,AIVVGGKG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6042 29.436 800.0 33599.0 25 0 9601.7 -1 0 29 1187.141393794088 0 1186.810595691204 PEAK CID FTMS 0 0 0 6039 24002.25 0.3629831583096211 -2 0.0739955902099609 3 6 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.29464 0.0 0.0 1020.6325667856383 1201.5507795664937 2222.183346352132 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.29464 - 2 + 1 1.737 35129.2 0.3899999856948852 1088 4952 6039 SUDHL4_400M_050219_2,6042 SUDHL4_400M_050219_2,6042, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6044 29.445 399.0 205590.0 25 0 28146.0 + -1 ERCGCNGFLYF 11 114 711.7993206605114 1421.5840883878227 2 711.7992431521416 MULTI CID FTMS 0 0 0 6043 199015.28125 0.135110280390011 24 -0.3224353790283203 1 2 Carbamidomethyl (C) _ERC(Carbamidomethyl (C))GC(Carbamidomethyl (C))NGFLYF_ REV__ENST00000328705.7_1_12:75706630-75719020:-|nuORF 16.149105407346934 0.6992268271266642 6 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y 13 -1 + 102.76 0.0 0.0 7.2287 7.2287 86.112 0.0 0.0 0.0 5.607218515801236 11.448658907276382 5.607218515801236 3.631779024128264 0 1.242992819099939 1.0969100130080565 1.234354503942959 1.7346368802282015 {[DA]|[EG]}QHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAGAQDA{M(Oxidation (M))|F}Y;[AG]DAHEAGAQDA{M(Oxidation (M))|F}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}AHEAGAQDA{M(Oxidation (M))|F}Y;[HD]EAQAGAQDA{M(Oxidation (M))|F}Y;[AG]ADHEAGAQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}GAHEAQQDA{M(Oxidation (M))|F}Y;{[DA]|[EG]}QHEAGA[AG]DA{M(Oxidation (M))|F}Y;[AG]DAHEAQQDA{M(Oxidation (M))|F}Y 7.2287;6.9732;6.8664;6.8342;6.7048;6.6708;6.6633;6.6091;6.5905;6.577 -;-;-;-;-;-;-;-;-;- 6098 1 1.737 60969.4 1.0 1089 4953 6043 SUDHL4_400M_050219_2,6044 SUDHL4_400M_050219_2,6044,ERCGCNGFLYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6045 29.448 135.0 318130.0 25 0 24777.0 + 12258 GQYPTQPTY 9 83 527.7455670447395 1053.4765811562788 2 527.7457153201103 MULTI CID FTMS 0 0 0 6043 333764.46875 1.0 0 0.0 2 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 21.74664581756881 0.2544899275067181 6 [{I|L}T]{M(Oxidation (M))|F}[HK]VN 7 9 21.514 0.0 0.0 2.0422 0.0 0.0 0.0 211.0367703597809 211.0367703597809 0.0569049053907342 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}T]{M(Oxidation (M))|F}[HK]VN 2.0422 - 174 1 1.737 39954.8 1.0 1090 4953 6043 SUDHL4_400M_050219_2,6045 SUDHL4_400M_050219_2,6045,GQYPTQPTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6046 29.462 800.0 118630.0 25 0 7266.6 + 31210 RLQESVMEA 9 127 539.7635385981572 1077.5125242631143 2 539.7635375857353 MULTI CID FTMS 0 0 0 6043 118791.6640625 0.1604756438241037 9 -0.2214698791503906 3 Oxidation (M) _RLQESVM(Oxidation (M))EA_ ENSG00000164754|ENST00000297338|RAD21 53.832793166522166 0.0319663582346103 6 {[CP]|[EA]}T[KP]SV{M(Oxidation (M))|F}EA 10 5 + 44.222 0.0 0.0 4.1041 4.1041 76.355 0.0 0.0 0.0 5.47950971637551 22.2835189564994 5.47950971637551 3.398780124438169 0 0.7984550065040282 0.0 1.3684151806525389 0.2887254899964357 {[CP]|[EA]}T[KP]SV{M(Oxidation (M))|F}EA;{[CP]|[EA]}TRRV{M(Oxidation (M))|F}EA;{[CP]|[EA]}T[KP]SVE{[MS]|[{M(Oxidation (M))|F}A]};{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}VS[KP][DP]A;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}VDR[RP]A;{[QV]|[N{I|L}]|[RA]|[KV]}[W{I|L}]SV{M(Oxidation (M))|F}EA;{[CP]|[EA]}TRRVE{[MS]|[{M(Oxidation (M))|F}A]};{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}VRR[DP]A;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}VS[PS][NP]{I|L};{[TV]|[{I|L}S]}AARDV{M(Oxidation (M))|F}EA 4.1041;3.7886;2.8741;2.8447;2.7867;2.7213;2.5587;2.5293;1.939;1.8514 -;-;-;-;-;-;-;-;-;- 1162 1 1.737 77077.6 0.6299999952316284 1091 4953 6043 SUDHL4_400M_050219_2,6046 SUDHL4_400M_050219_2,6046,RLQESVMEA True False RLQESVMEA 29.462024 539.763537585735 6123231.5 6043.0 ENSG00000164754|ENST00000297338|RAD21 5.892638365427653 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6047 29.476 800.0 209520.0 25 0 51061.0 + 37922 TLYEHNNEL 9 124 566.7670954742789 1131.5196380153575 2 566.7665893435478 MULTI CID FTMS 0 0 0 6043 92593.6875 0.0332160066508288 -5 0.1183948516845703 4 Unmodified _TLYEHNNEL_ ENSG00000094914|ENST00000209873|AAAS;ENST00000548880.1_1_12:53709415-53715282:-|nuORF;nc|ENSG00000094914|Q9NRG9-2|AAAS 96.36657018975838 0.0123932121270252 6 [YE]HNNE{I|L}T{I|L} 9 4 + 70.204 0.0 0.0 6.2044 6.2044 83.173 0.0 0.0 0.0 3.3937397757733976 16.478174818886373 3.3937397757733976 3.3937397757733976 0 0.3807196863200844 0.9208187539523752 0.6421590589602533 1.4604093769761874 [YE]HNNE{I|L}T{I|L};[HN]NEYE{I|L}T{I|L};{[YC]|[HE]}YNNE{I|L}T{I|L};[YE]HNNT{I|L}E{I|L};[HN]NEEY{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEYE{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}HEEY{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}EHYE{I|L}T{I|L};[HN]NEYT{I|L}E{I|L};{[YC]|[HE]}YNNT{I|L}E{I|L} 6.2044;5.9045;5.8606;5.833;5.8114;5.7906;5.6975;5.5697;5.533;5.4891 -;-;-;-;-;-;-;-;-;- 3528 1 1.737 128979.5 0.5600000023841858 1092 4953 6043 SUDHL4_400M_050219_2,6047 SUDHL4_400M_050219_2,6047,TLYEHNNEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6048 29.49 800.0 127570.0 25 0 14759.0 + 33683 SIYMIPVGPI 10 128 363.873030122081 0 363.8729431033134 PEAK CID FTMS 0 0 0 6043 87210.9375 1.0 0 0.0 5 Unmodified _SIYMIPVGPI_ REV__ENSG00000119616|ENST00000341162|FCF1 6.723162845929126 0.3961065659209837 6 VE 2 -1 8.8502 0.0 0.0 1.2195 0.0 0.0 362.5452412970933 132.04607568912346 494.5913169862167 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 VE 1.2195 - 13 + 1 1.737 86379.1 0.4199999868869781 1093 4953 6043 SUDHL4_400M_050219_2,6048 SUDHL4_400M_050219_2,6048,SIYMIPVGPI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6050 29.507 800.0 92225.0 25 0 8112.5 + + 30096 KMVGDVTGAQAY 12 100 628.3028629267392 1254.5911729202785 2 628.3018066287041 MULTI CID FTMS 0 0 0 6049 82593.6875 1.0 0 0.0 1 Unmodified _QVFDQKEQAY_ chr11:314356-314927|47|98.94|0.0|23.24|+|1|IFITM1,IFITM1|3;ENSG00000142089|ENST00000399808|IFITM3;ENSG00000185885|ENST00000408968|IFITM1;ENST00000527146.1_2_11:308871-309162:+|nuORF;ENSG00000185201|ENST00000616316|IFITM2 13.042465956692816 0.6287021003332052 6 [AG]AY[PS]VTGAQAY 13 -1 + 60.342 0.0 0.0 4.8097 4.8097 82.643 0.0 0.0 0.0 11.870866433571445 11.448658907276368 11.448658907276368 8.631779024128257 0 0.8935078169319297 2.0 1.3494850021680094 0.0 [AG]AY[PS]VTGAQAY;[AG]AY[PS]VTQQAY;[AG]AY[PS]VTGA[AG]AY;[QA]Y[PS]VTGAQAY;[AG]AY[PS]VTQ[AG]AY;[QA]Y[PS]VTQQAY;[QA]Y[PS]VTGA[AG]AY;[AG]AY[PS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AQAY;[AG]AGA[HQ][PG]GAQAY;[AG]AGT[RN]THHAY 4.8097;4.1217;4.0865;3.8635;3.3965;3.1779;3.1383;3.0684;3.0109;2.987 -;-;-;-;-;-;-;-;-;- 905 1 1.709 59388.4 0.5799999833106995 1094 4954 6049 SUDHL4_400M_050219_2,6050 SUDHL4_400M_050219_2,6050,QVFDQKEQAY False False KMVGDVTGAQAY 29.506895 628.301806628704 446089.03125 6049.0 chr11:314356-314927|47|98.94|0.0|23.24|+|1|IFITM1,IFITM1|3;;ENSG00000142089|ENST00000399808|IFITM3;;ENSG00000185885|ENST00000408968|IFITM1;;ENST00000527146.1_2_11:308871-309162:+|nuORF;;ENSG00000185201|ENST00000616316|IFITM2 6.844929536183675 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6051 29.509 116.0 454000.0 25 0 78268.0 + 43646 YANSKAVTL 9 71 483.7664120590944 965.5182711849887 2 483.7667724490166 MULTI CID FTMS 0 0 0 6049 180159.015625 0.5288363668719602 -3 0.1126117706298828 2 Unmodified _YANSKAVTL_ ENSG00000164091|ENST00000296490|WDR82;ENST00000487402.1_1_3:52291508-52301068:-|nuORF 14.838274106304384 0.4350285940865338 6 C{I|L} 2 8 14.464 0.0 0.0 1.4981 0.0 0.0 731.4170118849872 0.0 731.4170118849872 0.0 2.6812135341915955 0.0 0.0 0 0.5 0.0 0.0 0.0 C{I|L} 1.4981 - 28 + 1 1.709 46382.1 1.0 1095 4954 6049 SUDHL4_400M_050219_2,6051 SUDHL4_400M_050219_2,6051,YANSKAVTL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6052 29.523 800.0 94168.0 25 0 24090.0 -1 0 41 1168.794642544305 3503.362098233114 3 1169.131518542767 MULTI CID FTMS 0 0 0 6049 170537.375 0.6894767852584368 -8 0.1797504425048828 3 6 VT 2 -1 17.078 0.0 0.0 0.48748 0.0 0.0 2670.9869692954 629.2378381593101 3300.2248074547097 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7614393726401688 0.0 VT 0.48748 - 47 + 1 1.709 69887.0 0.550000011920929 1096 4954 6049 SUDHL4_400M_050219_2,6052 SUDHL4_400M_050219_2,6052, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6053 29.537 800.0 26937.0 25 0 9101.5 -1 0 22 1094.7845069372147 0 1094.786303699017 PEAK CID FTMS 0 0 0 6049 102571.609375 0.957634630793082 1 -0.0474109649658203 4 6 C(Carbamidomethyl (C)) 1 -1 5.4846 0.0 0.0 0.25072 0.0 0.0 1482.2170718804855 542.2746676080686 2024.4917394885545 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.25072 - 1 + 1 1.709 28625.7 0.4699999988079071 1097 4954 6049 SUDHL4_400M_050219_2,6053 SUDHL4_400M_050219_2,6053, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6055 29.553 800.0 106990.0 25 0 7034.6 -1 VMINKATPY 9 126 526.7759927813885 1051.5374326295769 2 526.7764770388603 MULTI CID FTMS 0 0 0 6054 105774.5234375 0.2316320525239405 4 -0.0908031463623046 1 Oxidation (M) _VM(Oxidation (M))INKATPY_ ENSG00000170906|ENST00000485876|NDUFA3 36.12702656103203 0.0967173616627612 6 N{M(Oxidation (M))|F}[KA]TPY 7 -1 34.728 0.0 0.0 3.3026 0.0 0.0 212.1203926899269 0.0 212.1203926899269 0.0 16.267959391884546 0.0 0.0 0 1.174742501084005 0.0 0.3807196863200844 0.0 N{M(Oxidation (M))|F}[KA]TPY 3.3026 - 800 + 1 1.709 74618.5 0.9399999976158142 1098 4955 6054 SUDHL4_400M_050219_2,6055 SUDHL4_400M_050219_2,6055,VMINKATPY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6056 29.557 229.0 430830.0 25 0 109440.0 + 37078 TGKLISSY 8 70 434.7425547083944 0 434.7423278689384 PEAK CID FTMS 0 0 0 6054 137047.265625 1.0 0 0.0 2 Unmodified _TGKLISSY_ ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-2|TMEM209;nc|ENSG00000146842|Q96SK2-3|TMEM209;nc|ENSG00000146842|Q96SK2-4|TMEM209 19.256988751693697 0.4320151646958274 6 S 1 7 7.8811 0.0 0.0 0.90851 0.0 0.0 599.3640023837826 178.05149255924064 777.4154949430232 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 + S 0.90851 + + 5 + 1 1.709 82061.1 1.0 1099 4955 6054 SUDHL4_400M_050219_2,6056 SUDHL4_400M_050219_2,6056,TGKLISSY False True TGKLISSY 29.557265 434.742327868938 548965.1875 6054.0 nc|ENSG00000146842|Q96SK2-4|TMEM209;;ENSG00000146842|ENST00000397622|TMEM209;;nc|ENSG00000146842|Q96SK2-3|TMEM209;;nc|ENSG00000146842|Q96SK2-2|TMEM209 4.59721048672994 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6057 29.566 473.0 178560.0 25 0 12740.0 + 10594 FVKQTTNY 8 124 500.7585229879687 0 500.7580749392509 PEAK CID FTMS 0 0 0 6054 101612.2890625 1.0 0 0.0 3 Unmodified _FVKQTTNY_ REV__ENSG00000214842|ENST00000399080|RAD51AP2 10.073929032068715 0.5407296281113586 6 ENNY 4 -1 8.0913 0.0 0.0 0.80953 0.0 0.0 213.2111244898062 263.07883630924067 476.28996079904687 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ENNY 0.80953 - 62 + 1 1.709 67922.0 1.0 1100 4955 6054 SUDHL4_400M_050219_2,6057 SUDHL4_400M_050219_2,6057,FVKQTTNY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6058 29.579 800.0 138020.0 25 0 7285.2 + 2202 AQAPPTAQL 9 137 448.7458690223488 895.4771851114975 2 448.7466613650322 MULTI CID FTMS 0 0 0 6054 83905.3515625 0.4857359004825933 -17 0.3569278717041015 4 Unmodified _AQAPPTAQL_ ENSG00000118513|ENST00000341911|MYB;nc|ENSG00000118513|P10242-10|MYB;nc|ENSG00000118513|P10242-11|MYB;nc|ENSG00000118513|P10242-12|MYB;nc|ENSG00000118513|P10242-2|MYB;nc|ENSG00000118513|P10242-3|MYB;nc|ENSG00000118513|P10242-5|MYB;nc|ENSG00000118513|P10242-6|MYB;nc|ENSG00000118513|P10242-7|MYB;nc|ENSG00000118513|P10242-8|MYB;nc|ENSG00000118513|P10242-9|MYB;nc|ENSG00000118513|P10242|MYB 57.72198328787511 0.0273433238377839 6 [QA]TPPAA[Q{I|L}] 9 2 + 37.527 0.0 0.0 4.1908 4.1908 76.945 0.0 0.0 0.0 3.6515681109976015 4.762036441594198 3.6515681109976015 3.6515681109976015 0 0.805462187404089 0.585026652029182 1.0 0.4247425010840047 [QA]TPPAA[Q{I|L}];[AG]ATPPAA[Q{I|L}];{[HG]|PP}TAAGAA[Q{I|L}];{[HG]|PP}TAAQA[Q{I|L}];{[HG]|PP}TAQAA[Q{I|L}];[PA][TP]AGAA[Q{I|L}];[PA][TP]AQA[Q{I|L}];[PA][TP]QAA[Q{I|L}];[PA][QT]PAA[Q{I|L}];[VP][NS]PAA[Q{I|L}] 4.1908;3.783;3.4521;3.2554;3.1969;3.042;2.8453;2.7868;1.8638;0.96624 -;-;-;-;-;-;-;-;-;- 309 1 1.709 89921.4 0.5799999833106995 1101 4955 6054 SUDHL4_400M_050219_2,6058 SUDHL4_400M_050219_2,6058,AQAPPTAQL True True AQAPPTAQL 29.579444 448.746661365032 1892042.0 6054.0 nc|ENSG00000118513|P10242-10|MYB;;nc|ENSG00000118513|P10242-3|MYB;;nc|ENSG00000118513|P10242-9|MYB;;nc|ENSG00000118513|P10242-12|MYB;;nc|ENSG00000118513|P10242|MYB;;nc|ENSG00000118513|P10242-6|MYB;;ENSG00000118513|ENST00000341911|MYB;;nc|ENSG00000118513|P10242-8|MYB;;nc|ENSG00000118513|P10242-5|MYB;;nc|ENSG00000118513|P10242-7|MYB;;nc|ENSG00000118513|P10242-11|MYB;;nc|ENSG00000118513|P10242-2|MYB 6.344122250874837 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6061 29.599 800.0 129300.0 25 0 7044.9 + -1 SIRPDNMSEY 10 124 614.269382635262 1226.524212337324 2 614.2689086794853 MULTI CID FTMS 0 0 0 6060 96519.28125 0.7261106650884124 1 -0.0405502319335937 1 Oxidation (M) _SIRPDNM(Oxidation (M))SEY_ ENST00000481281.5_1_1:32757770-32793222:+|nuORF;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;nc|ENSG00000196591|Q92769-3|HDAC2;ENSG00000196591|ENST00000519065|HDAC2;ENST00000521233.1_1_6:114279792-114292096:-|nuORF;ENSG00000116478|ENST00000373548|HDAC1 35.61225514009592 0.2039006631696762 6 {[TV]|[{I|L}S]}R[DP]N{M(Oxidation (M))|F}SEY 10 -1 + 63.454 0.0 0.0 5.1734 5.1734 79.228 0.0 0.0 0.0 16.73393743112328 40.58785173621935 16.73393743112328 3.0102999566398125 0 0.7302046884880937 1.3979400086720375 0.8807196863200843 0.0 {[TV]|[{I|L}S]}R[DP]N{M(Oxidation (M))|F}SEY;{[TV]|[{I|L}S]}R[DP]NTD{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}RYY{M(Oxidation (M))|F}SEY;{[TV]|[{I|L}S]}RYYTD{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}R[DP]GG{M(Oxidation (M))|F}SEY;{[TV]|[{I|L}S]}R[DP]GGTD{M(Oxidation (M))|F}Y;{[TV]|[{I|L}S]}QV[PA][DG]M{M(Oxidation (M))|F}Y;[VS]V[WP]N{M(Oxidation (M))|F}SEY;[VS]V[WP]NTD{M(Oxidation (M))|F}Y;[PS][KP]WS{M(Oxidation (M))|F}SEY 5.1734;4.928;4.8863;4.6409;4.4262;4.1808;3.1983;2.952;2.7066;2.3822 +;-;-;-;-;-;-;-;-;- + 813 1 1.691 79088.1 0.7599999904632568 1102 4957 6060 SUDHL4_400M_050219_2,6061 SUDHL4_400M_050219_2,6061,SIRPDNMSEY False False SIRPDNMSEY 29.599448 614.268908679485 671774.375 6060.0 ENST00000481281.5_1_1:32757770-32793222:+|nuORF;;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;;nc|ENSG00000196591|Q92769-3|HDAC2;;ENSG00000196591|ENST00000519065|HDAC2;;ENST00000521233.1_1_6:114279792-114292096:-|nuORF;;ENSG00000116478|ENST00000373548|HDAC1 7.347732384999593 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6062 29.61 604.0 301820.0 25 0 36607.0 + 12214 GQTKPVVVY 9 130 495.7844483304508 989.5543437277016 2 495.7843810915947 MULTI CID FTMS 0 0 0 6060 371511.25 1.0 0 0.0 2 Unmodified _GQTKPVVVY_ chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;ENSG00000119969|ENST00000348459|HELLS;nc|ENSG00000119969|Q9NRZ9-2|HELLS;nc|ENSG00000119969|Q9NRZ9-3|HELLS;nc|ENSG00000119969|Q9NRZ9-4|HELLS;nc|ENSG00000119969|Q9NRZ9-5|HELLS;nc|ENSG00000119969|Q9NRZ9-6|HELLS 45.69961567697781 0.0497987121815769 6 [VP]VKT{[QG]|[NA]}VY 9 6 + 46.09 0.0 0.0 4.6577 4.6577 79.788 0.0 0.0 0.0 5.462522626101368 8.628940329170504 5.462522626101368 5.462522626101368 0 1.0 0.7695510786217261 0.3807196863200844 0.3494850021680094 [VP]VKT{[QG]|[NA]}VY;VVPKT{[QG]|[NA]}VY;{[QG]|[NA]}{I|L}VPSKVY;[VG][{I|L}T][NP]KVY;[VP]VKTV{[QG]|[NA]}Y;[VP]VKVT{[QG]|[NA]}Y;[VP][W{I|L}][{I|L}T]VY;VVPKTV{[QG]|[NA]}Y;[VP]VVKT{[QG]|[NA]}Y;VV[TA][NP]KVY 4.6577;4.1056;3.7856;3.5702;2.806;2.54;2.4434;2.254;2.2358;2.2267 -;-;-;-;-;-;-;-;-;- 464 1 1.691 138161.8 1.0 1103 4957 6060 SUDHL4_400M_050219_2,6062 SUDHL4_400M_050219_2,6062,GQTKPVVVY True True GQTKPVVVY 29.609997 495.784381091595 1899791.5 6060.0 chr10:94545907-94546377|43|10.81|0.65|4.05|+|ENST00000419900|HELLS,HELLS;;nc|ENSG00000119969|Q9NRZ9-5|HELLS;;nc|ENSG00000119969|Q9NRZ9-2|HELLS;;nc|ENSG00000119969|Q9NRZ9-3|HELLS;;nc|ENSG00000119969|Q9NRZ9-6|HELLS;;ENSG00000119969|ENST00000348459|HELLS;;nc|ENSG00000119969|Q9NRZ9-4|HELLS 4.595028400421143 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6063 29.624 800.0 48956.0 25 0 3045.8 -1 ELELQGRMEF 10 84 634.3025305103047 1266.5905080874093 2 634.3033325076103 MULTI CID FTMS 0 0 0 6060 96855.125 0.5779390993842474 2 -0.0443267822265625 3 Oxidation (M) _ELELQGRM(Oxidation (M))EF_ ENSG00000103549|ENST00000324685|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;nc|ENSG00000103549|O75150-4|RNF40 18.1463463914782 0.5430639438673815 6 [KQ]{I|L}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}E{M(Oxidation (M))|F} 10 -1 + 33.483 0.0 0.0 2.6435 2.6435 77.855 0.0 0.0 0.0 2.263261709428196 18.878786234097248 2.263261709428196 9.164539485499256 0 0.5629529932484498 0.0 0.3494850021680094 0.8494850021680094 [KQ]{I|L}Q{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[KQ]{I|L}[AG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}A{M(Oxidation (M))|F}E{M(Oxidation (M))|F};[KQ]{I|L}[MD][{I|L}P]{M(Oxidation (M))|F}E{M(Oxidation (M))|F} 2.6435;1.92;0.92644 -;-;- 152 1 1.691 38185.4 0.6800000071525574 1104 4957 6060 SUDHL4_400M_050219_2,6063 SUDHL4_400M_050219_2,6063,ELELQGRMEF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6066 29.633 136.0 398770.0 25 0 186870.0 -1 0 52 488.2674278094713 487.2601513428713 1 488.2677490115166 MULTI CID FTMS 0 0 0 6065 348724.9375 0.9616427762554024 3 -0.0298347473144531 1 6 V[HN] 3 -1 5.9421 0.0 0.0 1.2195 0.0 0.0 119.0740452497086 0.0 119.0740452497086 0.0 5.942124970647031 0.0 0.0 0 0.0 0.0 0.0 0.0 V[HN] 1.2195 - 3 1 1.691 49370.6 1.0 1105 4959 6065 SUDHL4_400M_050219_2,6066 SUDHL4_400M_050219_2,6066, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6068 29.639 177.0 393870.0 25 0 79073.0 + 3137 AVPPALRGP 9 76 439.266509429665 876.51846592613 2 439.2662536501884 MULTI CID FTMS 0 0 0 6067 343130.9375 0.1035594053250267 45 -0.5746135711669922 1 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 6 {[VA]|[{I|L}G]}PPA 5 -1 42.72 0.0 0.0 4.8738 0.0 0.0 0.0 438.2477205865844 438.2477205865844 39.95592627924071 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.8738 + + 25 + 1 1.691 60986.9 1.0 1106 4960 6067 SUDHL4_400M_050219_2,6068 SUDHL4_400M_050219_2,6068,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6069 29.646 439.0 223720.0 25 0 27592.0 + -1 THLPGACLVQ 10 105 548.2829519693347 1094.551351005469 2 548.2827026247978 MULTI CID FTMS 0 0 0 6067 196568.984375 0.2559796334834407 15 -0.0997791290283203 2 Carbamidomethyl (C) _THLPGAC(Carbamidomethyl (C))LVQ_ REV__ENST00000418904.5_1_7:55540449-55620397:-|nuORF;REV__ENST00000428648.5_1_7:55540449-55639414:-|nuORF;REV__ENST00000453256.5_1_7:55540449-55583655:-|nuORF;REV__ENST00000462326.5_1_7:55503854-55639964:-|nuORF;REV__ENST00000471168.1_1_7:55560881-55640496:-|nuORF 13.90604991867851 0.6142120002215601 6 EHPPEH[HK] 8 -1 46.469 0.0 0.0 4.2455 0.0 0.0 85.08990676093906 0.0 85.08990676093906 0.0 34.64632226744975 0.0 0.0 0 2.305462187404089 0.0 0.7742275032520141 0.0 EHPPEH[HK] 4.2455 - 425 1 1.691 78921.0 1.0 1107 4960 6067 SUDHL4_400M_050219_2,6069 SUDHL4_400M_050219_2,6069,THLPGACLVQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6070 29.653 386.0 200730.0 25 0 30393.0 + 2649 ATDDSLHQL 9 102 500.2399916400665 998.465430346933 2 500.2401611208916 MULTI CID FTMS 0 0 0 6067 88861.9140625 1.0 0 0.0 3 Unmodified _ATDDSLHQL_ ENSG00000104549|ENST00000265896|SQLE 16.149105407346934 0.3995459350917656 6 [TA]DD{[TV]|[{I|L}S]}HQ{I|L} 9 0 + 38.527 0.0 0.0 3.8587 3.8587 83.63 0.0 0.0 0.0 20.58705000109704 6.36037863061177 6.36037863061177 13.455612550363805 0 0.3494850021680094 1.6989700043360187 0.0 0.4247425010840047 + + [TA]DD{[TV]|[{I|L}S]}HQ{I|L};[TA]DD{[TV]|[{I|L}S]}H[AG]{I|L};[TA][QP][KA]DD[PG];[TA][YK][{M(Oxidation (M))|F}T]D[PG];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WD][YK][PG] 3.8587;2.511;1.8691;1.1479;0.24164 +;-;-;-;- + 116 + 1 1.691 62880.5 1.0 1108 4960 6067 SUDHL4_400M_050219_2,6070 SUDHL4_400M_050219_2,6070,ATDDSLHQL False True ATDDSLHQL 29.65328 500.240161120892 351120.65625 6067.0 ENSG00000104549|ENST00000265896|SQLE 5.983016649881999 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6073 29.674 800.0 67961.0 25 0 7850.2 -1 0 46 996.5037918013684 0 996.7042724490166 PEAK CID FTMS 0 0 0 6072 34621.9609375 0.5051727182330809 -2 0.0246715545654296 1 6 AECT 4 -1 18.928 0.0 0.0 0.95068 0.0 0.0 1175.6452045970743 408.1803072565063 1583.8255118535806 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AECT 0.95068 - 16 + 1 1.684 41031.8 0.4300000071525574 1109 4962 6072 SUDHL4_400M_050219_2,6073 SUDHL4_400M_050219_2,6073, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6075 29.678 92.0 643260.0 25 0 127070.0 + 1324 AIVVGGKG 8 76 350.7213140513034 699.4280751694068 2 350.7211181521416 MULTI CID FTMS 0 0 0 6074 643018.125 0.332585855193847 8 -0.0428619384765625 1 Unmodified _AIVVGGKG_ REV__ENSG00000188011|ENST00000343216|RTP5;REV__ENST00000419912.1_1_2:242813297-242815423:+|nuORF 9.347437153973935 0.7675937258251505 6 [{I|L}A]{I|L}EVR 6 -1 + 53.461 0.0 0.0 7.6435 7.6435 90.93 0.0 0.0 0.0 46.47099695308839 15.00508444608478 15.00508444608478 8.81430547103885 0 0.4247425010840047 2.0 0.0 0.3807196863200844 [{I|L}A]{I|L}EVR;[{I|L}A]V{I|L}ER;[{I|L}A]{I|L}VER 7.6435;6.3833;5.6102 -;-;- 45 + 1 1.684 51322.9 1.0 1110 4963 6074 SUDHL4_400M_050219_2,6075 SUDHL4_400M_050219_2,6075,AIVVGGKG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6079 29.694 284.0 253820.0 25 0 24176.0 + 1390 ALAPGVRAV 9 89 427.2663394693895 852.518126005579 2 427.2667724490166 MULTI CID FTMS 0 0 0 6078 139381.28125 0.4207201366543069 -17 0.3647994995117187 1 Unmodified _ALAPGVRAV_ ENSG00000124226|ENST00000244061|RNF114;nc|ENSG00000124226|Q9Y508-2|RNF114 21.74664581756881 0.2544899275067181 6 [{I|L}A]APG 5 4 43.456 0.0 0.0 5.0973 0.0 0.0 0.0 440.2628267877563 440.2628267877563 36.46591250700361 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.0 + [{I|L}A]APG 5.0973 + + 47 + 1 1.684 59748.5 1.0 1111 4966 6078 SUDHL4_400M_050219_2,6079 SUDHL4_400M_050219_2,6079,ALAPGVRAV False True ALAPGVRAV 29.693958 427.266772449017 1477712.375 6078.0 ENSG00000124226|ENST00000244061|RNF114;;nc|ENSG00000124226|Q9Y508-2|RNF114 1.2352648576100669 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6083 29.712 412.0 234630.0 25 0 50850.0 + 12885 GVYGDVQRV 9 96 496.7621857594416 991.5098185856832 2 496.7617370486259 MULTI CID FTMS 0 0 0 6082 133109.484375 0.5814314600094378 11 -0.0809001922607421 1 Unmodified _GVYGDVQRV_ ENSG00000011304|ENST00000356948|PTBP1;ENSG00000117569|ENST00000674951|PTBP2;ENST00000586944.5_1_19:807712-810823:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;nc|ENSG00000117569|Q9UKA9-2|PTBP2;nc|ENSG00000117569|Q9UKA9-3|PTBP2;nc|ENSG00000117569|Q9UKA9-4|PTBP2 21.53697664764585 0.2571576504437394 6 [VG]YGDVQ[RV] 9 0 + 53.338 0.0 0.0 5.3795 5.3795 83.907 0.0 0.0 0.0 33.4163750790475 4.137342758552691 4.137342758552691 7.403626894942441 0 0.3494850021680094 1.6989700043360187 0.0 0.0 + + [VG]YGDVQ[RV];[VG]YGVDQ[RV];[VG]YGDV[RN]{I|L};[VG]YGDV[AG][RV];[VG]YVGDQ[RV];[VG]YGV[HV]VY;[VG]YGHVVVY;[VG]YVG[HV]VY;[VG]YGVD[RN]{I|L};[VG]VYGDQ[RV] 5.3795;4.6328;4.5768;4.4508;4.3292;4.2314;4.1933;3.9278;3.8301;3.7219 +;-;-;-;-;-;-;-;-;- + 446 + 1 1.684 79660.6 1.0 1112 4969 6082 SUDHL4_400M_050219_2,6083 SUDHL4_400M_050219_2,6083,GVYGDVQRV False True GVYGDVQRV 29.711675 496.761737048626 1052658.125 6082.0 nc|ENSG00000117569|Q9UKA9-2|PTBP2;;ENSG00000011304|ENST00000356948|PTBP1;;nc|ENSG00000011304|P26599-1|PTBP1;;ENST00000586944.5_1_19:807712-810823:+|nuORF;;nc|ENSG00000117569|Q9UKA9-3|PTBP2;;nc|ENSG00000011304|P26599-2|PTBP1;;nc|ENSG00000117569|Q9UKA9-4|PTBP2;;ENSG00000117569|ENST00000674951|PTBP2 2.025339841842652 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6085 29.716 33.0 1328600.0 25 0 358140.0 + 37923 TLYEHNNEL 9 62 566.7670954742789 1131.5196380153575 2 566.7671386599541 MULTI CID FTMS 0 0 0 6084 1662469.125 0.5963752714006291 12 -0.0980415344238281 1 Unmodified _TLYEHNNEL_ ENSG00000094914|ENST00000209873|AAAS;ENST00000548880.1_1_12:53709415-53715282:-|nuORF;nc|ENSG00000094914|Q9NRG9-2|AAAS 38.17557092003332 0.0854718145212029 6 {[YC]|[HE]}YNNT{I|L}E{I|L} 9 6 + 42.062 0.0 0.0 3.7173 3.7173 75.934 0.0 0.0 0.0 4.762036441594191 28.32441255669813 4.762036441594191 4.151603310239899 0 0.0 0.0 0.0 0.0 {[YC]|[HE]}YNNT{I|L}E{I|L};{[YC]|[HE]}YNNE[{I|L}T]{I|L};{NN|[MP]|[D{I|L}]|[EV]}EWNT{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}EHYT{I|L}E{I|L};{[YC]|[HE]}YNGGT{I|L}E{I|L};{[YC]|[HE]}YGGNT{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}EWNE[{I|L}T]{I|L};{NN|[MP]|[D{I|L}]|[EV]}EHYE[{I|L}T]{I|L};{[YC]|[HE]}YGGNE[{I|L}T]{I|L};{[YC]|[HE]}YNGGE[{I|L}T]{I|L} 3.7173;3.3504;3.2552;2.9891;2.9035;2.9035;2.8883;2.6222;2.5366;2.5366 -;-;-;-;-;-;-;-;-;- 290 1 1.684 42138.2 1.0 1113 4970 6084 SUDHL4_400M_050219_2,6085 SUDHL4_400M_050219_2,6085,TLYEHNNEL True True TLYEHNNEL 29.716464 566.767138659954 46397520.0 6084.0 nc|ENSG00000094914|Q9NRG9-2|AAAS;;ENSG00000094914|ENST00000209873|AAAS;;ENST00000548880.1_1_12:53709415-53715282:-|nuORF 5.019785006841024 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6092 29.744 299.0 163010.0 25 0 24820.0 33417 SHFKHTEL 8 84 499.7560474888279 997.4975420444558 2 499.7568542361259 MULTI CID FTMS 0 0 0 6091 54936.6953125 0.1119578070825367 -21 0.1997623443603515 1 Unmodified _SHFKHTEL_ ENSG00000130856|ENST00000320610|ZNF236;nc|ENSG00000130856|Q9UL36-2|ZNF236;nc|ENSG00000130856|Q9UL36|ZNF236 12.531546534597751 0.7257836412119636 6 {I|L} 1 7 12.764 0.0 0.0 1.2796 0.0 0.0 866.4022794485559 0.0 866.4022794485559 0.0 0.7745097999287154 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2796 + + 88 + 1 1.684 42988.0 1.0 1114 4976 6091 SUDHL4_400M_050219_2,6092 SUDHL4_400M_050219_2,6092,SHFKHTEL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6093 29.758 800.0 72997.0 25 0 5329.9 -1 CLCHRAGCYC 10 104 593.2220919515656 1184.4296309699312 2 593.2224609255791 MULTI CID FTMS 0 0 0 6091 87024.6328125 1.0 0 0.0 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))LCHRAGCYC_ ENST00000260356.5_1_15:39887667-39888120:+|nuORF 3.944395688203298 0.708391353636983 6 {[YC]|[HE]}{[MG]|[TS]}[KQ]S 7 -1 18.446 0.0 0.0 1.5573 0.0 0.0 0.0 384.0688852940569 384.0688852940569 2.9609817879939726 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3494850021680094 {[YC]|[HE]}{[MG]|[TS]}[KQ]S 1.5573 - 40 1 1.684 53271.1 0.5 1115 4976 6091 SUDHL4_400M_050219_2,6093 SUDHL4_400M_050219_2,6093,CLCHRAGCYC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6096 29.779 800.0 52584.0 25 0 13718.0 -1 0 34 1168.794642544305 3503.362098233114 3 1169.127612292767 MULTI CID FTMS 0 0 0 6095 95097.6015625 0.3844763566408841 16 -0.2237968444824218 1 6 S 1 -1 6.9897 0.0 0.0 0.19951 0.0 0.0 2466.901235051277 946.4296729178556 3413.330907969133 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.19951 - 14 + 1 1.684 45655.1 0.3600000143051147 1116 4978 6095 SUDHL4_400M_050219_2,6096 SUDHL4_400M_050219_2,6096, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6099 29.787 84.0 577640.0 25 0 44881.0 26447 NTEKIYGV 8 76 462.2460374992555 922.4775220653112 2 462.2462646365166 MULTI CID FTMS 0 0 0 6098 536914.125 0.5543974290740837 -6 0.0543441772460937 1 Unmodified _NTEKIYGV_ ENSG00000101974|ENST00000682941|ATP11C;nc|ENSG00000101974|Q8NB49-2|ATP11C;nc|ENSG00000101974|Q8NB49-3|ATP11C;nc|ENSG00000101974|Q8NB49-4|ATP11C;nc|ENSG00000101974|Q8NB49|ATP11C 18.13498045792455 0.6430038125133779 6 YGV 3 5 21.031 0.0 0.0 2.2798 0.0 0.0 585.3138390592549 0.0 585.3138390592549 0.0 14.041068762088996 0.0 0.0 0 0.5 0.0 0.0 0.0 + YGV 2.2798 + + 58 + 1 1.684 45019.6 1.0 1117 4980 6098 SUDHL4_400M_050219_2,6099 SUDHL4_400M_050219_2,6099,NTEKIYGV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6100 29.802 800.0 79804.0 25 0 4048.7 + 35275 SSKISFPDFTL 11 98 621.3221036345836 1240.6296543359672 2 621.3230468630791 MULTI CID FTMS 0 0 0 6098 86428.6484375 1.0 0 0.0 2 Unmodified _SSKISFPDFTL_ REV__ENSG00000197653|ENST00000673944|DNAH10;REV__ENST00000467219.5_1_12:124265674-124298205:+|nuORF;REV__nc|ENSG00000197653|Q8IVF4-2|DNAH10;REV__nc|ENSG00000197653|Q8IVF4|DNAH10 8.155526934196011 0.8366696279279818 6 D[PS]QSANV{I|L} 9 -1 48.427 0.0 0.0 3.9034 0.0 0.0 311.18541152168126 0.0 311.18541152168126 0.0 39.93169394953696 0.0 0.0 0 0.3494850021680094 0.0 1.1989700043360187 0.0 D[PS]QSANV{I|L} 3.9034 - 218 1 1.684 49502.7 0.4799999892711639 1118 4980 6098 SUDHL4_400M_050219_2,6100 SUDHL4_400M_050219_2,6100,SSKISFPDFTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6101 29.806 209.0 257330.0 25 0 53073.0 44063 YIRPQAGSSVT 11 74 393.54351621163926 1177.608719235118 3 393.5436279177666 MULTI CID FTMS 0 0 0 6098 80253.421875 0.5019295514840885 -8 0.0622081756591796 3 Unmodified _YIRPQAGSSVT_ ENSG00000175398|ENST00000309675|OR10P1 5.731851221503515 0.8481046878870278 6 {I|L} 1 10 15.485 0.0 0.0 1.3149 0.0 0.0 1046.5138075913662 0.0 1046.5138075913662 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3149 + + 22 + 1 1.684 49023.3 1.0 1119 4980 6098 SUDHL4_400M_050219_2,6101 SUDHL4_400M_050219_2,6101,YIRPQAGSSVT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6104 29.818 290.0 197250.0 25 0 11230.0 + 31138 RLNEKNYEL 9 93 589.8123357336706 1177.610118534141 2 589.8113891482353 MULTI CID FTMS 0 0 0 6103 120648.3515625 0.4892731467265407 -9 0.085235595703125 1 Unmodified _RLNEKNYEL_ ENSG00000047249|ENST00000359530|ATP6V1H;ENST00000521707.1_1_8:54669113-54684583:-|nuORF;nc|ENSG00000047249|Q9UI12-2|ATP6V1H 23.78978130925829 0.2284941198415988 6 [{I|L}V]{[WN]|[YH]}KNYE{I|L} 9 2 + 56.834 0.0 0.0 4.8263 4.8263 75.126 0.0 0.0 0.0 10.000700492505338 14.973024840566469 10.000700492505338 1.064921830680703 0 0.4517188504113846 1.3979400086720375 0.0 0.8494850021680094 [{I|L}V]{[WN]|[YH]}KNYE{I|L};[{I|L}V]{[WN]|[YH]}KNEY{I|L};[{I|L}V]{[WN]|[YH]}KGGYE{I|L};{[ET]|[MV]}K[PG]KNYE{I|L};[{I|L}V]{[WN]|[YH]}KGGEY{I|L};{[ET]|[MV]}K[PG]KNEY{I|L};{I|L}{M(Oxidation (M))|F}YNK[PG]K[DP];{[QN]|[E{I|L}]|[KN]}[RN]KNYE{I|L};{[QN]|[E{I|L}]|[KN]}[RN]KNEY{I|L};[{I|L}V]S{[ET]|[MV]}[QP]YE{I|L} 4.8263;4.7358;4.0443;3.977;3.9539;3.8866;3.7033;3.4896;3.3992;3.3835 -;-;-;-;-;-;-;-;-;- 474 1 1.684 49315.1 1.0 1120 4982 6103 SUDHL4_400M_050219_2,6104 SUDHL4_400M_050219_2,6104,RLNEKNYEL False True RLNEKNYEL 29.817593 589.811389148235 1238637.625 6103.0 ENSG00000047249|ENST00000359530|ATP6V1H;;ENST00000521707.1_1_8:54669113-54684583:-|nuORF;;nc|ENSG00000047249|Q9UI12-2|ATP6V1H 4.718063036600749 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6106 29.831 603.0 135810.0 25 0 6343.0 + 2203 AQAPPTAQL 9 130 448.7458690223488 895.4771851114975 2 448.7454406619072 MULTI CID FTMS 0 0 0 6105 153259.6875 0.887234615303902 11 -0.1684322357177734 1 Unmodified _AQAPPTAQL_ ENSG00000118513|ENST00000341911|MYB;nc|ENSG00000118513|P10242-10|MYB;nc|ENSG00000118513|P10242-11|MYB;nc|ENSG00000118513|P10242-12|MYB;nc|ENSG00000118513|P10242-2|MYB;nc|ENSG00000118513|P10242-3|MYB;nc|ENSG00000118513|P10242-5|MYB;nc|ENSG00000118513|P10242-6|MYB;nc|ENSG00000118513|P10242-7|MYB;nc|ENSG00000118513|P10242-8|MYB;nc|ENSG00000118513|P10242-9|MYB;nc|ENSG00000118513|P10242|MYB 45.69961567697781 0.0497987121815769 6 [QA]A 3 6 21.325 0.0 0.0 2.3814 0.0 0.0 0.0 622.3208490121413 622.3208490121413 0.9633418206192026 0.0 0.0 0.0 0 0.5 0.6575773191777937 0.0 0.3807196863200844 + [QA]A 2.3814 + + 279 1 1.684 65637.4 1.0 1121 4983 6105 SUDHL4_400M_050219_2,6106 SUDHL4_400M_050219_2,6106,AQAPPTAQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6111 29.848 150.0 498480.0 25 0 237170.0 37027 TFSLAAIKNY 10 76 376.54092506666353 1126.6009458001906 3 376.5407287478447 MULTI CID FTMS 0 0 0 6110 89868.5234375 0.1887646576375608 -7 0.0600013732910156 1 Unmodified _TFSLAAIKNY_ ENST00000557871.1_1_15:52214044-52217987:-|nuORF 3.5870582119611467 0.710044248540513 6 Y 1 9 13.979 0.0 0.0 1.2408 0.0 0.0 945.526984473822 0.0 945.526984473822 0.0 2.7203402217513784 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2408 + + 29 + 1 1.684 65730.1 1.0 1122 4987 6110 SUDHL4_400M_050219_2,6111 SUDHL4_400M_050219_2,6111,TFSLAAIKNY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6114 29.869 800.0 159350.0 25 0 7527.5 + 2253 AQFETKKLY 9 150 564.307968930035 1126.60138492687 2 564.3062621951103 MULTI CID FTMS 0 0 0 6113 68225.625 0.1889841235573667 -4 0.0176963806152343 1 Unmodified _AQFETKKLY_ ENSG00000183291|ENST00000331835|SELENOF;ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF 59.05245873256422 0.0266066919017776 6 AQ{M(Oxidation (M))|F}ETKK{I|L}Y 9 0 + 67.164 0.0 0.0 5.9617 5.9617 88.846 0.0 0.0 0.0 50.97473598062277 14.092568545288067 14.092568545288067 9.208187539523756 0 1.5 0.0 0.5796896906561032 0.5 + + AQ{M(Oxidation (M))|F}ETKK{I|L}Y;A[AG]{M(Oxidation (M))|F}ETKK{I|L}Y;AQTK[{M(Oxidation (M))|F}E]K{I|L}Y;AQT[{M(Oxidation (M))|F}E]KK{I|L}Y;AQ{M(Oxidation (M))|F}ETK[Y{I|L}]K;A[AG]TK[{M(Oxidation (M))|F}E]K{I|L}Y;AQT[YV]AAK{I|L}Y;A[AG]T[{M(Oxidation (M))|F}E]KK{I|L}Y;A[AG]{M(Oxidation (M))|F}ETK[Y{I|L}]K;AQTK[{M(Oxidation (M))|F}E][Y{I|L}]K 5.9617;5.1443;4.0952;3.7913;3.6368;3.2779;3.1482;2.9739;2.8194;1.7703 +;-;-;-;-;-;-;-;-;- + 901 + 1 1.684 96722.1 0.4600000083446502 1123 4989 6113 SUDHL4_400M_050219_2,6114 SUDHL4_400M_050219_2,6114,AQFETKKLY True True AQFETKKLY 29.868643 564.30626219511 1697756.125 6113.0 ENST00000331835.9_2_1:87346375-87379803:-|nuORF;;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;;nc|ENSG00000183291|O60613-2|SELENOF;;ENSG00000183291|ENST00000331835|SELENOF 5.685173988342285 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6115 29.875 337.0 143490.0 25 0 27498.0 -1 AVAEIGCTM 9 75 484.2162612239459 966.4179695146918 2 484.2154418826103 MULTI CID FTMS 0 0 0 6113 93062.1328125 0.5338221015590696 8 -0.1843090057373047 2 Carbamidomethyl (C),Oxidation (M) _AVAEIGC(Carbamidomethyl (C))TM(Oxidation (M))_ ENST00000468984.1_1_2:68384284-68384644:-|nuORF;ENST00000492039.6_1_2:68374697-68384644:-|nuORF 4.75600775471527 0.7486543447549536 6 M{M(Oxidation (M))|F} 2 -1 14.949 0.0 0.0 1.5468 0.0 0.0 670.330864923771 0.0 670.330864923771 0.0 4.859856381998782 0.0 0.0 0 0.0 0.0 0.0 0.0 M{M(Oxidation (M))|F} 1.5468 - 17 + 1 1.684 43375.4 1.0 1124 4989 6113 SUDHL4_400M_050219_2,6115 SUDHL4_400M_050219_2,6115,AVAEIGCTM False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6118 29.891 558.0 107630.0 25 0 10272.0 + 35907 SVNELIYKR 9 88 561.3195320433381 1120.624511153476 2 561.3198730349541 MULTI CID FTMS 0 0 0 6117 77160.921875 0.8795384074354788 1 -0.0261783599853515 1 Unmodified _SVNELIYKR_ ENSG00000147604|ENST00000352983|RPL7;ENST00000444633.1_1_10:100807788-100807923:+|nuORF;ENST00000461513.1_1_17:49579856-49580498:-|nuORF 34.93206674587334 0.1032771302489716 6 [VS]NE{I|L}{I|L}[YK]R 9 0 + 72.637 0.0 0.0 6.4818 6.4818 83.98 0.0 0.0 0.0 16.93574972449312 3.424226808222059 3.424226808222059 3.424226808222059 0 1.3494850021680094 2.0 0.0 0.4247425010840047 + + [VS]NE{I|L}{I|L}[YK]R;[VS]NE{I|L}{I|L}[RK]Y;[VS]GGE{I|L}{I|L}[YK]R;[VS]GGE{I|L}{I|L}[RK]Y 6.4818;6.1763;5.6601;5.3546 +;-;-;- + 132 + 1 1.684 53246.3 1.0 1125 4991 6117 SUDHL4_400M_050219_2,6118 SUDHL4_400M_050219_2,6118,SVNELIYKR True True SVNELIYKR 29.891153 561.319873034954 441323.8125 6117.0 ENSG00000147604|ENST00000352983|RPL7;;ENST00000444633.1_1_10:100807788-100807923:+|nuORF;;ENST00000461513.1_1_17:49579856-49580498:-|nuORF 5.191392262776692 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6119 29.905 800.0 96019.0 25 0 10432.0 -1 RMLDSVEKL 9 87 553.7968275392438 1105.5791021452876 2 553.7979003787041 MULTI CID FTMS 0 0 0 6117 84188.8671875 0.933996324746011 25 -0.8067760467529297 2 Oxidation (M) _RM(Oxidation (M))LDSVEKL_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 19.361941925380144 0.3125782356748823 6 SVE[K{I|L}] 5 -1 21.823 0.0 0.0 1.9739 0.0 0.0 531.2473220678862 0.0 531.2473220678862 0.0 8.723637474483468 0.0 0.0 0 0.5 0.0 0.0 0.0 SVE[K{I|L}] 1.9739 + + 77 1 1.684 65941.9 0.4799999892711639 1126 4991 6117 SUDHL4_400M_050219_2,6119 SUDHL4_400M_050219_2,6119,RMLDSVEKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6121 29.912 181.0 324520.0 25 0 60044.0 + 3138 AVPPALRGP 9 70 439.266509429665 876.51846592613 2 439.2663452029228 MULTI CID FTMS 0 0 0 6120 297545.5 0.0898013897016725 77 -2.149005889892578 1 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 6 {[VA]|[{I|L}G]}PPA 5 -1 42.575 0.0 0.0 4.8573 0.0 0.0 0.0 438.2470797174438 438.2470797174438 39.47621246364342 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.8573 + + 29 + 1 1.684 53850.3 1.0 1127 4992 6120 SUDHL4_400M_050219_2,6121 SUDHL4_400M_050219_2,6121,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6122 29.919 398.0 177490.0 25 0 17406.0 37542 TLHPVWSQQ 9 99 548.2829519693347 1094.551351005469 2 548.2836791872978 MULTI CID FTMS 0 0 0 6120 169705.375 0.2209968161090767 47 -1.358072280883789 2 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 14.95716135407024 0.4318104563536712 6 EHPPEH[HK] 8 7 54.774 0.0 0.0 5.0042 0.0 0.0 85.08981520820468 0.0 85.08981520820468 0.0 43.179957464582586 0.0 0.0 0 2.6549471895720984 0.0 0.805462187404089 0.0 EHPPEH[HK] 5.0042 - 686 1 1.684 60218.0 1.0 1128 4992 6120 SUDHL4_400M_050219_2,6122 SUDHL4_400M_050219_2,6122,TLHPVWSQQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6123 29.93 595.0 180880.0 25 0 26825.0 + 35618 SVADIRNAY 9 107 504.75909024027663 1007.5036275473532 2 504.7589904665947 MULTI CID FTMS 0 0 0 6120 111657.546875 0.551321315758634 -4 0.0567893981933593 3 Unmodified _SVADIRNAY_ ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4 27.628801355627647 0.1796483985696185 6 [VS]AD{I|L} 5 4 48.812 0.0 0.0 4.8449 0.0 0.0 0.0 519.2284029596311 519.2284029596311 34.20818753952375 0.0 0.0 0.0 0 0.9604093769761876 2.0 0.0 0.0 + [VS]AD{I|L} 4.8449 + + 161 + 1 1.684 87704.7 1.0 1129 4992 6120 SUDHL4_400M_050219_2,6123 SUDHL4_400M_050219_2,6123,SVADIRNAY False True SVADIRNAY 29.929892 504.758990466595 1057544.375 6120.0 nc|ENSG00000128815|Q6ZS81-5|WDFY4;;ENSG00000128815|ENST00000325239|WDFY4;;nc|ENSG00000128815|Q6ZS81-4|WDFY4 5.34802230199178 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6124 29.942 691.0 119210.0 25 0 6636.3 + -1 VISDLRLKM 9 103 545.8179425599652 1089.6213321867303 2 545.8182861208916 MULTI CID FTMS 0 0 0 6120 84926.625 1.0 0 0.0 4 Oxidation (M) _VISDLRLKM(Oxidation (M))_ REV__ENSG00000153147|ENST00000283131|SMARCA5 14.838274106304384 0.4350285940865338 6 T{M(Oxidation (M))|F}K 3 -1 22.92 0.0 0.0 2.1034 0.0 0.0 695.4324416611429 0.0 695.4324416611429 0.0 8.531453582579605 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 T{M(Oxidation (M))|F}K 2.1034 - 110 + 1 1.684 66464.9 1.0 1130 4992 6120 SUDHL4_400M_050219_2,6124 SUDHL4_400M_050219_2,6124,VISDLRLKM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6126 29.958 800.0 103550.0 25 0 11994.0 -1 0 53 996.3020099326912 4976.473667330456 5 996.9050170779228 MULTI CID FTMS 0 0 0 6125 23567.20703125 0.1546870136549661 -7 0.1033172607421875 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.684 61779.1 0.3300000131130218 1131 4993 6125 SUDHL4_400M_050219_2,6126 SUDHL4_400M_050219_2,6126, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6127 29.972 800.0 134850.0 25 0 15815.0 + 2126 APVNRPDSTDE 11 90 600.7783203720103 1199.5420878108205 2 600.7784301638603 MULTI CID FTMS 0 0 0 6125 116301.484375 1.0 0 0.0 2 Unmodified _APVNRPDSTDE_ REV__ENSG00000189023|ENST00000399988|MAGEB16 16.149105407346934 0.6992268271266642 6 {I|L}{I|L}RDHDP 7 -1 40.74 0.0 0.0 3.3963 0.0 0.0 0.0 350.0848990152237 350.0848990152237 25.02706335427355 0.0 0.0 0.0 0 1.1861818737241734 0.0 0.3807196863200844 1.066901560044258 {I|L}{I|L}RDHDP 3.3963 - 143 1 1.684 82161.1 0.5400000214576721 1132 4993 6125 SUDHL4_400M_050219_2,6127 SUDHL4_400M_050219_2,6127,APVNRPDSTDE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6128 29.986 800.0 24833.0 25 0 5928.7 -1 0 26 1040.0981883267268 3117.272735580381 3 1040.770312488079 MULTI CID FTMS 0 0 0 6125 69539.9296875 1.0 0 0.0 3 6 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.22422 0.0 0.0 1750.6177806016683 1216.566943030966 2967.1847236326344 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.22422 - 2 + 1 1.684 33126.2 0.3199999928474426 1133 4993 6125 SUDHL4_400M_050219_2,6128 SUDHL4_400M_050219_2,6128, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6131 29.995 118.0 377900.0 25 0 24904.0 + 10351 FSHPQAAQL 9 75 499.7560474888279 997.4975420444558 2 499.7561828494072 MULTI CID FTMS 0 0 0 6130 463869.78125 0.945339780363332 -2 0.0481643676757812 1 Unmodified _FSHPQAAQL_ ENSG00000269404|ENST00000595883|SPIB;ENST00000594188.1_1_19:50922219-50926375:+|nuORF;nc|ENSG00000269404|Q01892-2|SPIB 26.268140514670165 0.1969607489560049 6 KDAAQ{I|L} 6 5 45.623 0.0 0.0 4.5737 0.0 0.0 353.14848525215 0.0 353.14848525215 0.0 33.78653141768609 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 KDAAQ{I|L} 4.5737 - 236 1 1.684 39910.9 1.0 1134 4995 6130 SUDHL4_400M_050219_2,6131 SUDHL4_400M_050219_2,6131,FSHPQAAQL False True FSHPQAAQL 29.995086 499.756182849407 3305029.25 6130.0 ENSG00000269404|ENST00000595883|SPIB;;nc|ENSG00000269404|Q01892-2|SPIB;;ENST00000594188.1_1_19:50922219-50926375:+|nuORF 7.523972988128662 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6132 30.008 770.0 132370.0 25 0 10257.0 + 2277 AQGGYRSNC 9 111 478.20796461879866 0 478.2092162966728 PEAK CID FTMS 0 0 0 6130 46406.27734375 0.5266954173624244 1 -0.0424098968505859 2 Unmodified _AQGGYRSNC_ REV__ENST00000455577.6_1_15:40531750-40531930:+|nuORF 10.073929032068715 0.3114232490637051 6 P 1 -1 7.4743 0.0 0.0 0.78313 0.0 0.0 658.2525858764661 196.072564946936 854.325150823402 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 P 0.78313 - 8 + 1 1.684 81570.5 1.0 1135 4995 6130 SUDHL4_400M_050219_2,6132 SUDHL4_400M_050219_2,6132,AQGGYRSNC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6133 30.022 800.0 76141.0 25 0 16130.0 + 37924 TLYEHNNEL 9 88 566.7670954742789 1131.5196380153575 2 566.7665283083916 MULTI CID FTMS 0 0 0 6130 87031.6875 0.0312207580115313 37 -1.1956501007080078 3 Unmodified _TLYEHNNEL_ ENSG00000094914|ENST00000209873|AAAS;ENST00000548880.1_1_12:53709415-53715282:-|nuORF;nc|ENSG00000094914|Q9NRG9-2|AAAS 27.628801355627647 0.1796483985696185 6 [{I|L}T]C(Carbamidomethyl (C)) 3 7 32.319 0.0 0.0 2.8563 0.0 0.0 0.0 754.3194674127561 754.3194674127561 17.715299873086607 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]C(Carbamidomethyl (C)) 2.8563 - 266 + 1 1.684 53812.6 0.4600000083446502 1136 4995 6130 SUDHL4_400M_050219_2,6133 SUDHL4_400M_050219_2,6133,TLYEHNNEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6134 30.033 587.0 146060.0 25 0 8118.8 29682 QPDFELHAI 9 118 535.2672155443643 1068.5198781555284 2 535.2663452029228 MULTI CID FTMS 0 0 0 6130 97659.234375 0.4520492720095522 -7 0.1418933868408203 4 Unmodified _QPDFELHAI_ ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4 25.399314129420983 0.2080152500878129 6 QDT[WK]A{I|L} 7 5 58.37 0.0 0.0 5.4627 0.0 0.0 208.08800667290967 0.0 208.08800667290967 0.0 48.092663928157066 0.0 0.0 0 2.339136830878453 0.0 0.3494850021680094 0.3252574989159953 QDT[WK]A{I|L} 5.4627 - 293 + 1 1.684 67025.1 1.0 1137 4995 6130 SUDHL4_400M_050219_2,6134 SUDHL4_400M_050219_2,6134,QPDFELHAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6138 30.049 309.0 214190.0 25 0 13021.0 + 29845 QQLYWSHPR 9 79 405.5402542175732 1213.5989332529196 3 405.5400268435478 MULTI CID FTMS 0 0 0 6137 155866.1875 0.3002710840236457 -6 0.1356410980224609 1 Unmodified _QQLYWSHPR_ ENSG00000213741|ENST00000245458|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50053001-50053064:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 27.628801355627647 0.1796483985696185 6 YWSHPR 6 3 37.159 0.0 0.0 3.0619 0.0 0.0 369.19873901639454 0.0 369.19873901639454 0.0 25.73268251561565 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.6989700043360187 + YWSHPR 3.0619 + + 183 + 1 1.684 57872.0 1.0 1138 4998 6137 SUDHL4_400M_050219_2,6138 SUDHL4_400M_050219_2,6138,QQLYWSHPR False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6139 30.054 261.0 291220.0 25 0 35414.0 26448 NTEKIYGV 8 90 462.2460374992555 922.4775220653112 2 462.2468749880791 MULTI CID FTMS 0 0 0 6137 232348.25 0.2399141062825688 12 -0.3334674835205078 2 Unmodified _NTEKIYGV_ ENSG00000101974|ENST00000682941|ATP11C;nc|ENSG00000101974|Q8NB49-2|ATP11C;nc|ENSG00000101974|Q8NB49-3|ATP11C;nc|ENSG00000101974|Q8NB49-4|ATP11C;nc|ENSG00000101974|Q8NB49|ATP11C 21.74664581756881 0.5868176546531598 6 YR 2 7 27.206 0.0 0.0 2.9493 0.0 0.0 585.3112049787125 0.0 585.3112049787125 0.0 14.107281392838829 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 YR 2.9493 - 70 1 1.684 65493.3 1.0 1139 4998 6137 SUDHL4_400M_050219_2,6139 SUDHL4_400M_050219_2,6139,NTEKIYGV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6140 30.058 254.0 152480.0 25 0 8329.4 + 15981 ITDKPLMP 8 80 457.7561157725802 0 457.7560607790947 PEAK CID FTMS 0 0 0 6137 126569.5078125 0.5979942390505382 5 -0.1160488128662109 3 Unmodified _ITDKPLMP_ REV__ENSG00000085224|ENST00000373344|ATRX;REV__nc|ENSG00000085224|P46100-2|ATRX;REV__nc|ENSG00000085224|P46100-3|ATRX;REV__nc|ENSG00000085224|P46100-4|ATRX;REV__nc|ENSG00000085224|P46100-5|ATRX 24.67388899826682 0.3296343502680589 6 QKNT 4 -1 24.641 0.0 0.0 2.6975 0.0 0.0 329.15797021527914 110.0615709894164 439.21954120469553 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.2742275032520141 0.5 QKNT 2.6975 - 206 + 1 1.684 37251.9 1.0 1140 4998 6137 SUDHL4_400M_050219_2,6140 SUDHL4_400M_050219_2,6140,ITDKPLMP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6141 30.072 800.0 108930.0 25 0 11344.0 -1 KMDPIISRV 9 104 537.801761438145 1073.58896994309 2 537.8009521365166 MULTI CID FTMS 0 0 0 6137 92413.6953125 0.9006754826464142 2 -0.0356273651123046 4 Oxidation (M) _KM(Oxidation (M))DPIISRV_ ENSG00000159388|ENST00000290551|BTG2 22.65808497894818 0.2428932432760099 6 K{M(Oxidation (M))|F}DV 4 -1 39.042 0.0 0.0 3.6366 0.0 0.0 0.0 581.3429049127561 581.3429049127561 19.25508502313547 0.0 0.0 0.0 0 1.25 0.0 0.0 0.0 K{M(Oxidation (M))|F}DV 3.6366 - 153 + 1 1.684 71116.7 0.4600000083446502 1141 4998 6137 SUDHL4_400M_050219_2,6141 SUDHL4_400M_050219_2,6141,KMDPIISRV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6144 30.083 218.0 206080.0 25 0 16892.0 -1 VMDSKIVQV 9 92 517.7798405746147 1033.5451282160293 2 517.7812377810478 MULTI CID FTMS 0 0 0 6143 185120.015625 0.6504368387303623 -4 0.0437545776367187 1 Oxidation (M) _VM(Oxidation (M))DSKIVQV_ ENSG00000025800|ENST00000373625|KPNA6;ENSG00000114030|ENST00000344337|KPNA1;ENSG00000196911|ENST00000368564|KPNA5 31.26834338654808 0.1333407332142048 6 V{M(Oxidation (M))|F} 2 -1 24.776 0.0 0.0 2.3972 0.0 0.0 0.0 784.4193209283811 784.4193209283811 4.001743095932682 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 V{M(Oxidation (M))|F} 2.3972 + + 149 + 1 1.684 38768.8 1.0 1142 5000 6143 SUDHL4_400M_050219_2,6144 SUDHL4_400M_050219_2,6144,VMDSKIVQV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6145 30.097 800.0 155170.0 25 0 11354.0 + 29308 QIKPDMETY 9 141 570.7654135632508 1139.5162741933016 2 570.7655517458916 MULTI CID FTMS 0 0 0 6143 115860.9453125 0.2670608128306161 -7 0.1343288421630859 2 Oxidation (M) _QIKPDM(Oxidation (M))ETY_ ENSG00000117614|ENST00000236273|SYF2;nc|ENSG00000117614|O95926-2|SYF2 46.020951573049366 0.0490941689151868 6 [WH]VK[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]TY 8 6 + 28.764 0.0 0.0 2.5242 2.5242 71.694 0.0 0.0 0.0 0.1580151512974303 1.5787717634729397 0.1580151512974303 2.5322637047400818 0 0.2887254899964357 0.0 0.8921590589602533 0.0 [WH]VK[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]TY;[DP]{M(Oxidation (M))|F}EK[Q{I|L}]TY;[WH]VKT[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]Y;[DP]{M(Oxidation (M))|F}KE[Q{I|L}]TY;[WH]VTK[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]Y;[QA]TWM{M(Oxidation (M))|F}{[HG]|PP}Y;[WH]KV[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]TY;[Q{I|L}][WH]{M(Oxidation (M))|F}TT[HA];[EP]T{I|L}K{[C(Carbamidomethyl (C))E]|[WC]}TY;[TP]E{I|L}K{[C(Carbamidomethyl (C))E]|[WC]}TY 2.5242;2.302;1.7212;1.6886;1.62;1.5873;1.5733;1.4861;1.4667;1.3894 -;-;-;-;-;-;-;-;-;- 1789 + 1 1.684 95604.7 0.550000011920929 1143 5000 6143 SUDHL4_400M_050219_2,6145 SUDHL4_400M_050219_2,6145,QIKPDMETY True False QIKPDMETY 30.096779 570.765551745892 4695154.5 6143.0 ENSG00000117614|ENST00000236273|SYF2;;nc|ENSG00000117614|O95926-2|SYF2 6.967706362406413 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6146 30.109 718.0 216940.0 25 0 51535.0 + -1 VQGRPGAPF 9 125 465.2627204386104 464.2554439720104 1 465.2631408572197 MULTI CID FTMS 0 0 0 6143 108369.765625 0.1987952528977756 -7 0.1343288421630859 3 ENST00000589104.5_1_19:5070919-5151519:+|nuORF;UHRF1-KDM4B|2|fusion;UHRF1-KDM4B|1|fusion;nc|ENSG00000127663|O94953|KDM4B;ENSG00000127663|ENST00000159111|KDM4B 6 {I|L} 1 -1 13.495 0.0 0.0 2.9068 0.0 0.0 333.1602729288448 0.0 333.1602729288448 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.9068 - 26 + 1 1.684 122180.6 1.0 1144 5000 6143 SUDHL4_400M_050219_2,6146 SUDHL4_400M_050219_2,6146, False False VQGRPGAPF 30.109221 465.26314085722 702031.5625 6143.0 ENST00000589104.5_1_19:5070919-5151519:+|nuORF;;UHRF1-KDM4B|2|fusion;;UHRF1-KDM4B|1|fusion;;nc|ENSG00000127663|O94953|KDM4B;;ENSG00000127663|ENST00000159111|KDM4B 0.6758979558944702 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6148 30.117 281.0 270850.0 25 0 89763.0 + 2254 AQFETKKLY 9 76 376.54092506666353 1126.6009458001906 3 376.5411865115166 MULTI CID FTMS 0 0 0 6147 119284.3046875 0.2505511393155344 7 -0.1701984405517578 1 Unmodified _AQFETKKLY_ ENSG00000183291|ENST00000331835|SELENOF;ENST00000331835.9_2_1:87346375-87379803:-|nuORF;ENST00000467557.1_1_1:87346375-87379497:-|nuORF;nc|ENSG00000183291|O60613-2|SELENOF 6.1918466704503565 0.6985299363762377 6 Y 1 8 16.99 0.0 0.0 1.508 0.0 0.0 945.52652671015 0.0 945.52652671015 0.0 1.9846155972754056 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.508 + + 28 + 1 1.684 65337.0 1.0 1145 5001 6147 SUDHL4_400M_050219_2,6148 SUDHL4_400M_050219_2,6148,AQFETKKLY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6149 30.125 451.0 232100.0 25 0 49464.0 + + -1 ASNDYTQQATQSY 13 98 759.8203635093431 1517.626174085486 2 759.8209106326103 MULTI CID FTMS 0 0 0 6147 195541.96875 0.8271514739726606 -1 0.0329627990722656 2 Oxidation (M) _WWM(Oxidation (M))WTKEEGSY_ ENSG00000089280|ENST00000254108|FUS;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;nc|ENSG00000089280|P35637-2|FUS 3.2813086475875832 0.8596665074481906 6 [DN]{[CP]|[EA]}YTQQA 9 -1 34.385 0.0 0.0 2.2657 0.0 0.0 0.0 494.1886206233197 494.1886206233197 5.540553589187852 0.0 0.0 0.0 0 0.5 1.3979400086720375 1.035666875892183 0.3054621874040891 [DN]{[CP]|[EA]}YTQQA 2.2657 - 942 1 1.684 77168.8 1.0 1146 5001 6147 SUDHL4_400M_050219_2,6149 SUDHL4_400M_050219_2,6149,WWMWTKEEGSY False False ASNDYTQQATQSY 30.12496 759.82091063261 1286400.625 6147.0 ENSG00000089280|ENST00000254108|FUS;;ENST00000487045.6_1_16:31191511-31194161:+|nuORF;;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;;nc|ENSG00000089280|P35637-2|FUS 8.144753138224283 2.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6150 30.139 800.0 146590.0 25 0 8925.0 + 29846 QQLYWSHPR 9 98 607.8068798457648 1213.5992067583295 2 607.8066894412041 MULTI CID FTMS 0 0 0 6147 94120.40625 0.5395395954867782 -3 0.0685901641845703 3 Unmodified _QQLYWSHPR_ ENSG00000213741|ENST00000245458|RPS29;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50053001-50053064:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 57.72198328787511 0.0273433238377839 6 QQ{I|L}YWSHPR 9 0 + 66.283 0.0 0.0 5.4617 5.4617 90.966 0.0 0.0 0.0 43.161589538002815 18.389151722972187 18.389151722972187 32.730012720637376 0 0.6747425010840047 0.0 0.0 1.0941876774005248 + + QQ{I|L}YWSHPR;QQ{I|L}Y{[HG]|PP}{[ES]|[DT]|[{I|L}C]}PR;QQ{I|L}QQ[WM]PR;QQ{I|L}QQT{[ES]|[DT]|[{I|L}C]}PR;QQ{I|L}YW[WP]{[HG]|PP};QQ{I|L}Y{[HG]|PP}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[HG]|PP};[AG]Q{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}W[KQ][HT];QQ[KQ]W{[HG]|PP}{M(Oxidation (M))|F}R;QQ[RH]{[QN]|[E{I|L}]|[KN]}T{M(Oxidation (M))|F}R;QQ{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}W[KQ][HT] 5.4617;2.7647;1.8098;1.7069;1.6382;0.90194;0.88093;0.45784;0.31275;0.21505 +;-;-;-;-;-;-;-;-;- + 495 + 1 1.684 91076.9 0.4699999988079071 1147 5001 6147 SUDHL4_400M_050219_2,6150 SUDHL4_400M_050219_2,6150,QQLYWSHPR True True QQLYWSHPR 30.138791 607.806689441204 3871839.875 6147.0 ENST00000557367.2_1_14:50053001-50053064:-|nuORF;;ENSG00000213741|ENST00000245458|RPS29;;nc|ENSG00000213741|P62273-2|RPS29;;ENST00000554075.1_1_14:50052568-50053064:-|nuORF 8.29618533452352 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6151 30.153 800.0 94141.0 25 0 16446.0 + 13310 HKKVEFSL 8 96 494.2826032465824 986.5506535599648 2 494.2832519412041 MULTI CID FTMS 0 0 0 6147 86388.46875 1.0 0 0.0 4 Unmodified _HKKVEFSL_ REV__ENSG00000211448|ENST00000438257|DIO2;REV__ENST00000422005.7_2_14:80669058-80669397:-|nuORF;REV__nc|ENSG00000211448|Q92813-2|DIO2 14.581692164780916 0.6954967302934248 6 {[TV]|[{I|L}S]}D 3 -1 17.024 0.0 0.0 1.7256 0.0 0.0 0.0 668.3826597457648 668.3826597457648 4.260183716006381 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {[TV]|[{I|L}S]}D 1.7256 - 59 1 1.684 61596.6 0.9700000286102296 1148 5001 6147 SUDHL4_400M_050219_2,6151 SUDHL4_400M_050219_2,6151,HKKVEFSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6154 30.163 226.0 336980.0 25 0 59446.0 + 3139 AVPPALRGP 9 78 439.266509429665 876.51846592613 2 439.2662536501884 MULTI CID FTMS 0 0 0 6153 247827.671875 0.0747961886195728 88 -2.41778564453125 1 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 21.74664581756881 0.2544899275067181 6 {[VA]|[{I|L}G]}PPA 5 -1 46.695 0.0 0.0 5.3273 0.0 0.0 0.0 438.247069627664 438.247069627664 34.47621246364342 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 5.3273 + + 41 + 1 1.684 63978.0 1.0 1149 5003 6153 SUDHL4_400M_050219_2,6154 SUDHL4_400M_050219_2,6154,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6155 30.168 271.0 185800.0 25 0 21635.0 28368 PSKDGHEIS 9 86 485.2364300607264 968.4583071882528 2 485.2366210818291 MULTI CID FTMS 0 0 0 6153 121992.4609375 0.7296347096569683 -4 0.0844860076904296 2 Unmodified _PSKDGHEIS_ ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12 13.042465956692816 0.4836390050082244 6 [{I|L}T]AAE 5 8 22.205 0.0 0.0 2.2928 0.0 0.0 0.0 480.1918941845998 480.1918941845998 9.106056125004828 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3252574989159953 0.0 [{I|L}T]AAE 2.2928 - 158 1 1.684 43898.2 1.0 1150 5003 6153 SUDHL4_400M_050219_2,6155 SUDHL4_400M_050219_2,6155,PSKDGHEIS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6156 30.182 800.0 84695.0 25 0 23359.0 -1 0 30 1191.14844502313 3570.4235056695907 3 1191.817187488079 MULTI CID FTMS 0 0 0 6153 159307.5625 0.1715388046059966 -6 0.1201133728027343 3 6 E 1 -1 6.9897 0.0 0.0 0.19577 0.0 0.0 2914.196565844115 524.1618746393186 3438.3584404834337 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19577 - 4 + 1 1.684 64574.6 0.4399999976158142 1151 5003 6153 SUDHL4_400M_050219_2,6156 SUDHL4_400M_050219_2,6156, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6157 30.196 800.0 100970.0 25 0 7818.9 -1 0 91 681.3452969158284 680.3380204492283 1 681.3453857302666 MULTI CID FTMS 0 0 0 6153 106853.828125 0.9710258201345038 4 -0.0887432098388671 4 6 [YE]VTAV 6 -1 + 75.875 0.0 0.0 11.152 11.152 98.627 0.0 0.0 0.0 24.819393642848475 46.064023828167606 24.819393642848475 25.624693683041485 0 1.3263487002666077 1.5228787452803376 1.674742501084005 0.0 [YE]VTAV;[YE]ATVV;{[TV]|[{I|L}S]}YEAV;[TA]EYVV;[YT]VEAV;[TA]V[YE]V;{[TV]|[{I|L}S]}A[YE]V;[YT]{[CP]|[EA]}VV;[TA]VV[YE];{[ES]|[DT]|[{I|L}C]}[Y{I|L}]AV 11.152;7.386;7.3848;6.3299;5.611;4.9708;4.6093;3.115;2.9234;2.8423 -;-;-;-;-;-;-;-;-;- 246 1 1.684 64247.4 0.5 1152 5003 6153 SUDHL4_400M_050219_2,6157 SUDHL4_400M_050219_2,6157, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6159 30.207 476.0 140320.0 25 0 14545.0 37543 TLHPVWSQQ 9 106 548.2829519693347 1094.551351005469 2 548.2833740115166 MULTI CID FTMS 0 0 0 6158 114382.25 0.1489529313340396 59 -1.7788925170898438 1 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 12.872603262515298 0.4882369880199512 6 [{I|L}T]AYPEH[HK] 9 7 + 41.589 0.0 0.0 3.7997 3.7997 82.113 0.0 0.0 0.0 0.6935402242081068 30.16926657591485 0.6935402242081068 9.348331157524967 0 2.1989700043360187 0.0 0.4247425010840047 0.0 [{I|L}T]AYPEH[HK];[{I|L}T]H[WH]H[HK];{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]ES{[DS]|[MA]|[CV]|TT}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[{I|L}T]EH[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSE[YV][HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VS[HV]SH[VP];[{I|L}T]{NN|[MP]|[D{I|L}]|[EV]}[MT]H[HK];[{I|L}T]H[MD][{I|L}T][HK];{[QN]|[E{I|L}]|[KN]}[WH]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[MS]|[{M(Oxidation (M))|F}A]}[YV][HK] 3.7997;2.9456;2.6436;2.1115;1.9816;1.2896;1.1817;0.97949;0.49368;0.47078 -;-;-;-;-;-;-;-;-;- 414 1 1.684 56172.3 1.0 1153 5004 6158 SUDHL4_400M_050219_2,6159 SUDHL4_400M_050219_2,6159,TLHPVWSQQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6161 30.224 800.0 68264.0 25 0 8171.7 -1 0 38 996.3020099326912 4976.473667330456 5 996.9050781130792 MULTI CID FTMS 0 0 0 6160 33596.578125 0.2205163442698523 5 -0.1669330596923828 1 6 E 1 -1 6.9897 0.0 0.0 0.14045 0.0 0.0 4325.206041453306 519.2031344049436 4844.40917585825 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.14045 - 7 + 1 1.684 44342.7 0.3700000047683716 1154 5005 6160 SUDHL4_400M_050219_2,6161 SUDHL4_400M_050219_2,6161, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6162 30.233 560.0 104980.0 25 0 7083.6 + 12259 GQYPTQPTY 9 91 527.745482018233 1053.476411103266 2 527.7455932497978 MULTI CID FTMS 0 0 0 6160 143835.0625 0.9275614020061768 -4 0.0979442596435546 2 Unmodified _GQYPTQPTY_ ENSG00000183283|ENST00000412716|DAZAP2;ENST00000549041.1_1_12:51632691-51634266:+|nuORF;ENST00000552173.5_1_12:51632691-51634513:+|nuORF;ENST00000552459.2_1_12:51634062-51634266:+|nuORF;nc|ENSG00000183283|Q15038-2|DAZAP2;nc|ENSG00000183283|Q15038-3|DAZAP2;nc|ENSG00000183283|Q15038-4|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2;nc|ENSG00000183283|Q15038-6|DAZAP2 21.74664581756881 0.2544899275067181 6 [TP]QY 4 5 29.226 0.0 0.0 2.7743 0.0 0.0 0.0 561.2319031376929 561.2319031376929 2.142878945214619 0.0 0.0 0.0 0 0.0 1.154901959985743 0.5994850021680094 0.0 [TP]QY 2.7743 - 145 1 1.684 50984.7 1.0 1155 5005 6160 SUDHL4_400M_050219_2,6162 SUDHL4_400M_050219_2,6162,GQYPTQPTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6163 30.241 449.0 156180.0 25 0 18700.0 + 1962 AMPPPPPQGV 10 100 503.7555795449998 1005.4966061567995 2 503.7549621462822 MULTI CID FTMS 0 0 0 6160 105060.34375 0.5395046420898162 50 -1.590280532836914 3 Oxidation (M) _AM(Oxidation (M))PPPPPQGV_ ENSG00000164754|ENST00000297338|RAD21;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 46.020951573049366 0.1035046897853725 6 [VS]{[NV]|[RG]}PPPP{[CP]|[EA]} 10 7 + 42.756 0.0 0.0 4.2522 4.2522 79.884 0.0 0.0 0.0 4.181212380090216 31.91839537060811 4.181212380090216 6.92487876808098 0 2.0114393726401687 1.0969100130080565 0.0 0.0 [VS]{[NV]|[RG]}PPPP{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}PPPP[QP]GV;[VS]{[NV]|[RG]}[YK]P{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}P[YK][QP]GV;[VS]{[NV]|[RG]}P[YK]{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{[RE]|[WV]}[KA]EGV;{[MS]|[{M(Oxidation (M))|F}A]}[YK]P[QP]GV;{[MS]|[{M(Oxidation (M))|F}A]}{[RE]|[WV]}[RK]{[CP]|[EA]};[R{M(Oxidation (M))|F}][KA]{[RE]|[WV]}{[CP]|[EA]} 4.2522;3.5635;2.0766;1.3879;1.2164;0.6982;0.5277;0.40286;0.35211 -;+;-;-;-;-;-;-;- + 196 1 1.684 59480.8 1.0 1156 5005 6160 SUDHL4_400M_050219_2,6163 SUDHL4_400M_050219_2,6163,AMPPPPPQGV True False AMPPPPPQGV 30.241363 503.754962146282 5469156.0 6160.0 ENSG00000164754|ENST00000297338|RAD21;;ENST00000523986.5_1_8:117864120-117864294:-|nuORF 8.201685905456543 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6166 30.252 199.0 268330.0 25 0 32511.0 -1 0 72 473.2594934157232 472.2522169491232 1 473.2592346072197 MULTI CID FTMS 0 0 0 6165 187127.90625 0.6909297949846522 14 -0.5648307800292969 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.684 48538.1 1.0 1157 5007 6165 SUDHL4_400M_050219_2,6166 SUDHL4_400M_050219_2,6166, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6167 30.266 800.0 109960.0 25 0 10650.0 8643 EVEEDEYKAFY 11 112 711.3068376421643 1420.5991223511285 2 711.3082763552666 MULTI CID FTMS 0 0 0 6165 93312.6171875 0.0057594365568423 -5 0.0928153991699218 2 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 6 {[QG]|[NA]}GS[HN]AQQNA{M(Oxidation (M))|F}Y 13 10 + 78.765 0.0 0.0 5.5445 5.5445 79.704 0.0 0.0 0.0 5.338741295818011 11.448658907276382 5.338741295818011 2.2577249674798736 0 0.8935078169319297 0.744727494896694 0.6505149978319906 1.416386562212267 {[QG]|[NA]}GS[HN]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GS[HN]AQNQA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GS[HN]AGAQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GS[HN]AGANQA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}S[HN]AQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAGAQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}S[HN]AQNQA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}S[HN]AGAQNA{M(Oxidation (M))|F}Y 5.5445;5.3856;5.3782;5.2192;5.1687;5.1005;5.0098;5.0005;4.9416;4.9323 -;-;-;-;-;-;-;-;-;- 5003 1 1.684 66444.2 0.5 1158 5007 6165 SUDHL4_400M_050219_2,6167 SUDHL4_400M_050219_2,6167,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6168 30.279 800.0 121710.0 25 0 48247.0 40241 VGSMMGGG 8 68 695.2863362150173 694.2790597484172 1 695.2878295779228 MULTI CID FTMS 0 0 0 6165 142795.015625 0.9002884329605414 -1 0.004068374633789 3 Unmodified _VGSMMGGG_ L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|69|2|sense 0.7936320650641473 0.8195151834710337 6 A 1 8 0.83746 0.0 0.0 0.12062 0.0 0.0 452.11578872966567 168.10299097232658 620.2187797019923 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.12062 - 4 + 1 1.684 75218.0 0.5899999737739563 1159 5007 6165 SUDHL4_400M_050219_2,6168 SUDHL4_400M_050219_2,6168,VGSMMGGG False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_2 6170 30.296 800.0 125020.0 25 0 7662.7 -1 LGGSLMEYAI 10 137 535.2672155443643 1068.5198781555284 2 535.2662231326103 MULTI CID FTMS 0 0 0 6169 84888.359375 0.3929348955389452 6 -0.3321437835693359 1 Oxidation (M) _LGGSLM(Oxidation (M))EYAI_ ENSG00000127483|ENST00000438032|HP1BP3;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;nc|ENSG00000127483|Q5SSJ5-3|HP1BP3 20.453626601364224 0.5043500229302764 6 QDTTRGA{I|L} 8 -1 56.707 0.0 0.0 5.3071 0.0 0.0 208.08208626275345 0.0 208.08208626275345 0.0 46.8744381650793 0.0 0.0 0 1.9489700043360187 0.0 0.0 0.3252574989159953 QDTTRGA{I|L} 5.3071 - 1225 + 1 1.684 79995.7 0.5899999737739563 1160 5008 6169 SUDHL4_400M_050219_2,6170 SUDHL4_400M_050219_2,6170,LGGSLMEYAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6171 30.31 800.0 86091.0 25 0 8733.8 -1 GQGPVMENAQ 10 111 523.7316980670155 1045.4488432008309 2 523.7321655154228 MULTI CID FTMS 0 0 0 6169 100643.5546875 1.0 0 0.0 2 Oxidation (M) _GQGPVM(Oxidation (M))ENAQ_ ENSG00000069998|ENST00000336737|HDHD5;nc|ENSG00000069998|Q9BXW7-2|HDHD5 17.11289562659939 0.5604042439455784 6 [VP]QN{M(Oxidation (M))|F}NEAQ 9 -1 + 41.788 0.0 0.0 3.9972 3.9972 75.217 0.0 0.0 0.0 3.010299956639805 9.577570906191896 3.010299956639805 3.010299956639805 0 0.8935078169319297 0.6989700043360187 0.0 0.0 [VP]QN{M(Oxidation (M))|F}NEAQ;[NP]{I|L}N{M(Oxidation (M))|F}NEAQ;{[TV]|[{I|L}S]}[HT]{M(Oxidation (M))|F}NEAQ;[VP][AG]N{M(Oxidation (M))|F}NEAQ;[VP]QN{M(Oxidation (M))|F}GGEAQ;[VP]QGG{M(Oxidation (M))|F}NEAQ;[VP]QNEA[CS]AQ;[NP]{I|L}N{M(Oxidation (M))|F}GGEAQ;[NP]{I|L}GG{M(Oxidation (M))|F}NEAQ;[NP]{I|L}NEA[CS]AQ 3.9972;3.7092;3.3083;3.1164;3.1164;3.1164;3.0242;2.8284;2.8284;2.7362 -;-;-;-;-;-;-;-;-;- 616 1 1.684 59758.3 0.4900000095367431 1161 5008 6169 SUDHL4_400M_050219_2,6171 SUDHL4_400M_050219_2,6171,GQGPVMENAQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6172 30.323 800.0 67936.0 25 0 5997.4 + + 29097 QENSSDFQSNIA 12 96 670.2911289325498 1338.5677049318997 2 670.2917358279228 MULTI CID FTMS 0 0 0 6169 90647.515625 0.9849737136764436 -1 0.03399658203125 3 Unmodified _QENSFDSDRLE_ chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;ENSG00000169045|ENST00000393432|HNRNPH1;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 26.268140514670165 0.4754186812857754 6 [NS]QE[WY]Q 7 -1 44.663 0.0 0.0 3.3366 0.0 0.0 0.0 400.185966000512 400.185966000512 23.94953030252148 0.0 0.0 0.0 0 0.0 0.7695510786217261 1.274227503252014 1.4604093769761874 [NS]QE[WY]Q 3.3366 - 359 1 1.684 47708.0 0.4900000095367431 1162 5008 6169 SUDHL4_400M_050219_2,6172 SUDHL4_400M_050219_2,6172,QENSFDSDRLE False False QENSSDFQSNIA 30.323469 670.291735827923 485927.0 6169.0 chr5:179614230-179615546|11|29.27|0.28|6.69|-|0|None,HNRNPH1|1;;ENSG00000169045|ENST00000393432|HNRNPH1;;ENST00000502632.5_1_5:179042549-179043984:-|nuORF 6.465871016184489 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6173 30.331 394.0 241030.0 25 0 117280.0 -1 0 70 492.26224254213616 491.2549660755362 1 492.2616149783134 MULTI CID FTMS 0 0 0 6169 182597.859375 0.4762287104761682 -8 0.2031612396240234 4 6 YSY 3 -1 20.177 0.0 0.0 4.1073 0.0 0.0 60.07779429994867 0.0 60.07779429994867 0.0 9.208187539523747 0.0 0.0 0 0.0 0.0 0.0 0.0 YSY 4.1073 - 11 + 1 1.684 79773.5 1.0 1163 5008 6169 SUDHL4_400M_050219_2,6173 SUDHL4_400M_050219_2,6173, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6175 30.348 800.0 82608.0 25 0 9013.4 + 18077 KTFTWVMPW 9 81 598.3004378101202 1194.5863226870404 2 598.3005248904228 MULTI CID FTMS 0 0 0 6174 66288.078125 0.7941386177608534 1 -0.0435771942138671 1 Unmodified _KTFTWVMPW_ REV__ENST00000480380.1_1_1:19545909-19546163:-|nuORF 4.3292370932331545 0.7635526921153418 6 K 1 -1 14.118 0.0 0.0 1.1818 0.0 0.0 1048.480516267898 0.0 1048.480516267898 0.0 4.440483352479543 0.0 0.0 0 0.0 0.0 0.0 0.1643943297944484 K 1.1818 + + 11 + 1 1.684 52234.5 0.4799999892711639 1164 5009 6174 SUDHL4_400M_050219_2,6175 SUDHL4_400M_050219_2,6175,KTFTWVMPW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6176 30.362 800.0 238120.0 25 0 32199.0 + 8949 FAMNDESVFY 10 125 611.7596076675779 1221.5046624019558 2 611.7595092654228 MULTI CID FTMS 0 0 0 6174 115164.3125 0.06841365902168 -3 0.0891666412353515 2 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 32.30548876998284 0.2428506522065767 6 [HD]EAQQNA{M(Oxidation (M))|F}Y 10 -1 + 117.59 0.0 0.0 9.6263 9.6263 93.369 0.0 0.0 0.0 16.856060427780363 79.37483655280369 16.856060427780363 9.164539485499247 0 0.75 0.958607314841775 1.979339555460717 1.6549471895720984 [HD]EAQQNA{M(Oxidation (M))|F}Y;[HD]EA[AG]QNA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[HD]EAQQGGA{M(Oxidation (M))|F}Y;[HD]EA[AG]QGGA{M(Oxidation (M))|F}Y;[HD]EAQ[AG]GGA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQNA{M(Oxidation (M))|F}Y;[HD]EA[AG][AG]NA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQ[AG]NA{M(Oxidation (M))|F}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HAQQGGA{M(Oxidation (M))|F}Y 9.6263;8.876;8.876;8.876;8.1287;8.1287;7.989;7.817;7.2387;7.2387 -;-;-;-;-;-;-;-;-;- 2486 1 1.684 142050.3 0.550000011920929 1165 5009 6174 SUDHL4_400M_050219_2,6176 SUDHL4_400M_050219_2,6176,FAMNDESVFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6177 30.374 693.0 148010.0 25 0 14911.0 -1 RLQGATAMV 9 123 481.7573741193458 961.5001953054916 2 481.7580749392509 MULTI CID FTMS 0 0 0 6174 94848.4375 0.9325886921758292 -1 0.0511016845703125 3 Oxidation (M) _RLQGATAM(Oxidation (M))V_ ENST00000371085.7_2_20:57470717-57478626:+|nuORF 29.081581746732265 0.1611639662936252 6 QTA{M(Oxidation (M))|F}V 5 -1 41.498 0.0 0.0 4.316 0.0 0.0 397.2435475080094 0.0 397.2435475080094 0.0 21.37218422611668 0.0 0.0 0 0.8807196863200843 0.0 0.9247425010840048 0.0 QTA{M(Oxidation (M))|F}V 4.316 - 341 1 1.684 82918.2 1.0 1166 5009 6174 SUDHL4_400M_050219_2,6177 SUDHL4_400M_050219_2,6177,RLQGATAMV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6179 30.39 800.0 121290.0 25 0 9453.1 -1 YLAEDGVTCL 10 141 570.7654135632508 1139.5162741933016 2 570.7656127810478 MULTI CID FTMS 0 0 0 6178 61484.71875 0.1417229845807695 3 -0.2285575866699218 1 Carbamidomethyl (C) _YLAEDGVTC(Carbamidomethyl (C))L_ ENSG00000168702|ENST00000389484|LRP1B 10.823927491677226 0.6659270209832991 6 {[WN]|[YH]}QC(Carbamidomethyl (C))R{I|L}TY 8 -1 + 31.151 0.0 0.0 2.7337 2.7337 77.054 0.0 0.0 0.0 9.724797210082343 8.494850021680094 8.494850021680094 8.298122174395033 0 0.0 0.0 0.3807196863200844 0.0 {[WN]|[YH]}QC(Carbamidomethyl (C))R{I|L}TY;[QA]TQ[DN]S{I|L}TY;[QA]TW[NG]S{I|L}TY;[Q{I|L}][MN]EE{I|L}TY;{[WN]|[YH]}Q[CG]R{I|L}TY;{[WN]|[YH]}[AG]C(Carbamidomethyl (C))R{I|L}TY;[QA]TWEE{I|L}TY;[W{I|L}]E[DN]S{I|L}TY;[QA]Y{[{M(Oxidation (M))|F}H]|[RQ]}TD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[QA]TEG[NG]S{I|L}TY 2.7337;2.0055;2.0055;2.0008;1.9209;1.9209;1.851;1.5173;1.4251;1.3373 -;-;-;-;-;-;-;-;-;- 1669 + 1 1.684 81332.9 0.7099999785423279 1167 5010 6178 SUDHL4_400M_050219_2,6179 SUDHL4_400M_050219_2,6179,YLAEDGVTCL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6180 30.404 800.0 185510.0 25 0 14071.0 + 18933 RLTPKLMEV 9 138 550.8145177812619 1099.6144826293237 2 551.8178588747978 MULTI CID FTMS 0 0 0 6178 106274.65625 0.4439510044019278 -1 0.0435771942138671 2 Unmodified _LDAAIVEKIE_ ENSG00000147677|ENST00000521861|EIF3H 14.838274106304384 0.5985701837916485 6 {NN|[MP]|[D{I|L}]|[EV]}KK{[HG]|PP}{I|L}{M(Oxidation (M))|F}V 9 8 28.183 0.0 0.0 2.563 0.0 0.0 0.0 58.96817048627682 58.96817048627682 -2.0554603782464618 0.0 -2.0554603782464618 0.0 0 0.0 1.3979400086720375 1.1861818737241734 0.0 {NN|[MP]|[D{I|L}]|[EV]}KK{[HG]|PP}{I|L}{M(Oxidation (M))|F}V 2.563 - 496 1 1.684 114976.0 0.5199999809265137 1168 5010 6178 SUDHL4_400M_050219_2,6180 SUDHL4_400M_050219_2,6180,LDAAIVEKIE False False RLTPKLMEV 30.40431 551.817858874798 18266093.875 6178.0 ENSG00000147677|ENST00000521861|EIF3H 5.6141357421875 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6181 30.418 800.0 58258.0 25 0 2277.0 33084 SERPPYTWLQS 11 81 682.3332239859784 1362.6518950387567 2 682.3340331912041 MULTI CID FTMS 0 0 0 6178 90456.171875 1.0 0 0.0 3 Unmodified _SERPPYTWLQS_ nc|ENSG00000235098|E5RJM6-2|ANKRD65 18.373094154950223 0.6529654022026722 6 {[QV]|[N{I|L}]|[RA]|[KV]}[NG][W{I|L}]DG{M(Oxidation (M))|F}{I|L}QS 12 9 + 35.863 0.0 0.0 2.6318 2.6318 71.657 0.0 0.0 0.0 8.53724093556825 15.47035674964459 8.53724093556825 2.352127111743372 0 0.8737125054200234 0.8860566476931632 0.0 0.6203715150305281 {[QV]|[N{I|L}]|[RA]|[KV]}[NG][W{I|L}]DG{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))K][C(Carbamidomethyl (C))H]G{M(Oxidation (M))|F}{I|L}QS 2.6318;2.4592 -;- 125 1 1.684 41276.6 0.4900000095367431 1169 5010 6178 SUDHL4_400M_050219_2,6181 SUDHL4_400M_050219_2,6181,SERPPYTWLQS False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 6182 30.432 800.0 261360.0 25 0 9296.8 + 29540 QLNEQVHSL 9 192 534.2778457088406 1066.541138484481 2 534.7817260622978 MULTI CID FTMS 0 0 0 6178 100828.0234375 0.361906384319954 -1 0.0435771942138671 4 Unmodified _QLNEQVHSL_ ENSG00000166974|ENST00000300249|MAPRE2;nc|ENSG00000166974|Q15555-3|MAPRE2;nc|ENSG00000166974|Q15555-4|MAPRE2;nc|ENSG00000166974|Q15555-5|MAPRE2 85.64151623876279 0.0161498729896241 6 [Q{I|L}]NEQVHS{I|L} 9 0 + 76.097 0.0 0.0 7.1349 7.1349 91.303 0.0 0.0 0.0 40.06044340753462 14.09256854528806 14.09256854528806 9.208187539523747 0 0.2059771852360797 1.6989700043360187 1.7856668758921828 0.6549471895720984 + + [Q{I|L}]NEQVHS{I|L};[Q{I|L}]GGEQVHS{I|L};[Q{I|L}]NE[AG]VHS{I|L};[Q{I|L}]NEQ[HS]V{I|L};[Q{I|L}]GGE[AG]VHS{I|L};[Q{I|L}]N[Q{I|L}]DHS{I|L};[Q{I|L}]GGEQ[HS]V{I|L};[Q{I|L}]N{M(Oxidation (M))|F}QVRY;[Q{I|L}]NE[AG][HS]V{I|L};[Q{I|L}]NVQ[YG][{M(Oxidation (M))|F}V] 7.1349;6.2716;5.9852;5.0715;4.7982;4.5284;4.2082;3.9473;3.9218;3.6769 +;-;-;-;-;-;-;-;-;- + 5369 + 1 1.684 160707.4 0.4900000095367431 1170 5010 6178 SUDHL4_400M_050219_2,6182 SUDHL4_400M_050219_2,6182,QLNEQVHSL True True QLNEQVHSL 30.431979 534.781726062298 1943510.25 6178.0 ENSG00000166974|ENST00000300249|MAPRE2;;nc|ENSG00000166974|Q15555-4|MAPRE2;;nc|ENSG00000166974|Q15555-3|MAPRE2;;nc|ENSG00000166974|Q15555-5|MAPRE2 6.360867659250896 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6183 30.446 800.0 212210.0 25 0 29420.0 + 44315 YLNEKAVSY 9 154 543.7769545693296 1085.5393562054592 2 543.7774536013603 MULTI CID FTMS 0 0 0 6178 92432.484375 0.3223636027166329 -1 0.0435771942138671 5 Unmodified _YLNEKAVSY_ ENSG00000073921|ENST00000393346|PICALM;ENST00000531771.5_1_11:85718509-85733504:-|nuORF;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-5|PICALM 75.5705956163825 0.0189455680524554 6 Y{I|L}[QA][VS]RSY 9 5 + 75.453 0.0 0.0 6.9507 6.9507 82.727 0.0 0.0 0.0 43.413799512836846 0.4193287522687825 0.4193287522687825 1.71371189912945 0 1.1861818737241734 2.0 0.9456290139465237 0.7302046884880937 Y{I|L}[QA][VS]RSY;Y{I|L}N[PG]VAGQ[PA];Y{I|L}[HM]VAGQ[PA];Y{I|L}{[RE]|[WV]}[KQ]SY;Y{I|L}[TP]S[KQ]SY;{[QD]|[EN]|[WG]|[KD]|[RS]}KAV{I|L}YSY;Y{I|L}GG[PG]VAGQ[PA];Y{I|L}N[PG]VQQ[PA];{[QD]|[EN]|[WG]|[KD]|[RS]}KAVSY{I|L}Y;{[QD]|[EN]|[WG]|[KD]|[RS]}KAVS{I|L}YY 6.9507;6.7929;6.5297;6.4074;6.2873;6.1546;5.9519;5.7958;5.7228;5.6498 -;-;-;-;-;-;-;-;-;- 9358 + 1 1.684 132155.0 0.4900000095367431 1171 5010 6178 SUDHL4_400M_050219_2,6183 SUDHL4_400M_050219_2,6183,YLNEKAVSY True True YLNEKAVSY 30.44581 543.77745360136 1184642.125 6178.0 nc|ENSG00000073921|Q13492-5|PICALM;;ENSG00000073921|ENST00000393346|PICALM;;ENST00000531771.5_1_11:85718509-85733504:-|nuORF;;nc|ENSG00000073921|Q13492-3|PICALM;;nc|ENSG00000073921|Q13492-4|PICALM;;nc|ENSG00000073921|Q13492-2|PICALM 7.441771984100342 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6185 30.453 185.0 334930.0 25 0 54388.0 + 3140 AVPPALRGP 9 85 439.266509429665 876.51846592613 2 439.2663146853447 MULTI CID FTMS 0 0 0 6184 246870.171875 0.0745072081757773 96 -2.505434036254883 1 Unmodified _AVPPALRGP_ REV__ENSG00000260220|ENST00000638797|CCDC187 15.847184025352805 0.4077185912009129 6 {[VA]|[{I|L}G]}PPA 5 -1 42.461 0.0 0.0 4.8443 0.0 0.0 0.0 438.2461045056104 438.2461045056104 29.98651242028324 0.0 0.0 0.0 0 0.1747425010840047 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.8443 + + 32 + 1 1.684 53516.7 1.0 1172 5011 6184 SUDHL4_400M_050219_2,6185 SUDHL4_400M_050219_2,6185,AVPPALRGP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6186 30.461 441.0 263820.0 25 0 78878.0 -1 0 44 1191.14844502313 3570.4235056695907 3 1191.483081042767 MULTI CID FTMS 0 0 0 6184 621446.6875 0.6515590595513424 1 -0.0726776123046875 2 6 {M(Oxidation (M))|F}G 2 -1 9.464 0.0 0.0 0.26507 0.0 0.0 2000.6824911205656 1362.6262377191858 3363.3087288397514 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.26507 - 13 + 1 1.684 104764.8 1.0 1173 5011 6184 SUDHL4_400M_050219_2,6186 SUDHL4_400M_050219_2,6186, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6187 30.463 85.0 601400.0 25 0 77834.0 + -1 ICFNTDEAAFY 11 90 675.788241727832 1349.561930522464 2 675.7891723513603 MULTI CID FTMS 0 0 0 6184 670100.75 0.9906043478035912 -1 0.0717144012451171 3 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FNTDEAAFY_ REV__ENSG00000163746|ENST00000696113|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7-3|PLSCR2;REV__nc|ENSG00000163746|Q9NRY7|PLSCR2 17.11289562659939 0.6791789249425932 6 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y 11 -1 + 66.641 0.0 0.0 4.938 4.938 78.029 0.0 0.0 0.0 2.920305823461028 6.911294358687584 2.920305823461028 2.920305823461028 0 0.8935078169319297 0.0 0.7614393726401688 2.589136830878453 {[QN]|[E{I|L}]|[KN]}[HS]NQQNA{M(Oxidation (M))|F}Y;[HQ][NS]NQQNA{M(Oxidation (M))|F}Y;[HQ][SG]GNQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]GGQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]N[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HS]NQQGGA{M(Oxidation (M))|F}Y;[HQ][NS]GGQQNA{M(Oxidation (M))|F}Y;[HQ][NS]N[AG]QNA{M(Oxidation (M))|F}Y;[HQ][NS]NQ[AG]NA{M(Oxidation (M))|F}Y 4.938;4.7216;4.6349;4.2616;4.2616;4.2616;4.2616;4.0452;4.0452;4.0452 -;-;-;-;-;-;-;-;-;- 529 1 1.684 43263.0 1.0 1174 5011 6184 SUDHL4_400M_050219_2,6187 SUDHL4_400M_050219_2,6187,ICFNTDEAAFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6188 30.465 92.0 673220.0 25 0 116300.0 + 11765 GLKNGVPAV 9 81 427.7585310754444 853.5025092176888 2 427.7582885622978 MULTI CID FTMS 0 0 0 6184 637091.3125 0.902291467061522 -1 0.0717144012451171 4 Unmodified _GLKNGVPAV_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 26.34127834903884 0.1960301806784604 6 P[RV]PAV 6 5 24.359 0.0 0.0 2.8539 0.0 0.0 216.1105333538509 0.0 216.1105333538509 0.0 6.197887582883933 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 P[RV]PAV 2.8539 - 164 + 1 1.684 53548.6 1.0 1175 5011 6184 SUDHL4_400M_050219_2,6188 SUDHL4_400M_050219_2,6188,GLKNGVPAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6189 30.472 358.0 264670.0 25 0 31544.0 + -1 KVYNHLTMK 9 107 575.3078834299989 0 575.3066894412041 PEAK CID FTMS 0 0 0 6184 184684.890625 0.4163847751229761 -1 0.0717144012451171 5 Oxidation (M) _KVYNHLTM(Oxidation (M))K_ REV__ENSG00000006459|ENST00000397560|KDM7A;REV__nc|ENSG00000006459|Q6ZMT4-2|KDM7A 24.99096001346401 0.1558265925128033 6 KTT[{I|L}P][DV]TT 9 -1 51.039 0.0 0.0 4.4436 0.0 0.0 63.99806443645623 125.07235132388908 189.0704157603453 0.0 0.0 0.0 0.0 0 1.66944517631652 0.0 2.024227503252014 0.0 KTT[{I|L}P][DV]TT 4.4436 - 360 + 1 1.684 78323.9 1.0 1176 5011 6184 SUDHL4_400M_050219_2,6189 SUDHL4_400M_050219_2,6189,KVYNHLTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6190 30.485 800.0 98621.0 25 0 11342.0 -1 0 82 893.88091595436 1785.74727897552 2 894.3824340701103 MULTI CID FTMS 0 0 0 6184 130554.7734375 1.0 0 0.0 6 6 {M(Oxidation (M))|F}AQNQA[HD]{M(Oxidation (M))|F}Y 10 -1 57.216 0.0 0.0 3.2041 0.0 0.0 546.2180715047183 0.0 546.2180715047183 0.0 45.64606943178073 0.0 0.0 0 0.0 0.0 0.0 1.5356668758921828 {M(Oxidation (M))|F}AQNQA[HD]{M(Oxidation (M))|F}Y 3.2041 - 4592 + 1 1.684 62485.0 0.5 1177 5011 6184 SUDHL4_400M_050219_2,6190 SUDHL4_400M_050219_2,6190, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6191 30.499 800.0 126130.0 25 0 7801.5 + + -1 RLADKSVLV 9 105 500.8110012178515 999.6074495025032 2 500.8109619021416 MULTI CID FTMS 0 0 0 6184 112868.3515625 1.0 0 0.0 7 Oxidation (M) _VLPTLM(Oxidation (M))VIV_ ENST00000536090.1_1_12:6626539-6627126:+|nuORF;ENSG00000010292|ENST00000315579|NCAPD2 28.486842064014134 0.1687311288560894 6 [{I|L}V]{[QD]|[EN]|[WG]|[KD]|[RS]}KSV{I|L}V 9 -1 + 45.624 0.0 0.0 4.5642 4.5642 85.51 0.0 0.0 0.0 13.133637307377056 28.17212301312638 13.133637307377056 13.201075205960883 0 0.634400500525261 1.6989700043360187 0.5 0.0 [{I|L}V]{[QD]|[EN]|[WG]|[KD]|[RS]}KSV{I|L}V;[VS][WK]{[VA]|[{I|L}G]}V{I|L}V;[{I|L}V]{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L}WV;[{I|L}V]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TP]V{I|L}V 4.5642;3.2436;3.2169;2.5914 -;-;-;- 189 1 1.684 80817.8 0.5 1178 5011 6184 SUDHL4_400M_050219_2,6191 SUDHL4_400M_050219_2,6191,VLPTLMVIV False False RLADKSVLV 30.499214 500.810961902142 565771.875 6184.0 ENST00000536090.1_1_12:6626539-6627126:+|nuORF;;ENSG00000010292|ENST00000315579|NCAPD2 4.059181213378906 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6192 30.513 800.0 155800.0 25 0 13443.0 -1 YKCNMGYEYSE 11 113 730.2813217304379 1458.5480905276756 2 730.2818481326103 MULTI CID FTMS 0 0 0 6184 95178.0078125 0.8978255332734134 -1 0.0717144012451171 8 Carbamidomethyl (C),Oxidation (M) _YKC(Carbamidomethyl (C))NM(Oxidation (M))GYEYSE_ ENSG00000000971|ENST00000367429|CFH;ENST00000466229.5_1_1:196648727-196709933:+|nuORF;nc|ENSG00000000971|P08603-2|CFH;nc|ENSG00000000971|P08603|CFH 11.494710602746466 0.7960433852372589 6 [QA]HDE 5 -1 44.055 0.0 0.0 3.0204 0.0 0.0 0.0 875.3003750153354 875.3003750153354 22.627881306118454 0.0 0.0 0.0 0 1.805462187404089 0.0 0.9802046884880936 0.0 [QA]HDE 3.0204 - 258 + 1 1.684 92539.2 0.4900000095367431 1179 5011 6184 SUDHL4_400M_050219_2,6192 SUDHL4_400M_050219_2,6192,YKCNMGYEYSE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6193 30.518 297.0 277450.0 25 0 26741.0 + 42644 VTVNDIDPV 9 100 486.25483819911295 970.495123465026 2 486.2554199099541 MULTI CID FTMS 0 0 0 6184 98529.1328125 0.1781705000047468 152 -3.3945751190185547 9 Unmodified _VTVNDIDPV_ REV__ENSG00000123384|ENST00000243077|LRP1 25.399314129420983 0.2080152500878129 6 {[TV]|[{I|L}S]}V{[{M(Oxidation (M))|F}H]|[RQ]}AVT 8 -1 28.751 0.0 0.0 2.9625 0.0 0.0 0.0 113.01068684722055 113.01068684722055 11.756120438533824 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.2887254899964357 0.0 {[TV]|[{I|L}S]}V{[{M(Oxidation (M))|F}H]|[RQ]}AVT 2.9625 - 145 1 1.684 68467.6 1.0 1180 5011 6184 SUDHL4_400M_050219_2,6193 SUDHL4_400M_050219_2,6193,VTVNDIDPV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6195 30.523 3.3 12388000.0 25 0 1405800.0 8644 EVEEDEYKAFY 11 58 711.3068376421643 1420.5991223511285 2 711.3085815310478 MULTI CID FTMS 0 0 0 6194 16201692.0 1.0 0 0.0 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 6 [QA]HDEAQQNA{M(Oxidation (M))|F}Y 12 8 + 67.01 0.0 0.0 4.717 4.717 74.325 0.0 0.0 0.0 5.929862658764264 10.093728280886936 5.929862658764264 0.796896906561031 0 0.8935078169319297 0.0 0.3807196863200844 1.1237125054200234 [QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDAEQQNA{M(Oxidation (M))|F}Y;[QA]HDAEQNQA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]SAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]SAQNQA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]SAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[HN]SAQNQA{M(Oxidation (M))|F}Y;[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SAQQNA{M(Oxidation (M))|F}Y;[QA]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}SAQNQA{M(Oxidation (M))|F}Y 4.717;4.6609;4.3812;4.3251;4.2996;4.2435;4.2194;4.1633;4.1568;4.1007 -;-;-;-;-;-;-;-;-;- 1480 1 1.684 34182.8 1.0 1181 5012 6194 SUDHL4_400M_050219_2,6195 SUDHL4_400M_050219_2,6195,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6196 30.533 554.0 174570.0 25 0 11803.0 37544 TLHPVWSQQ 9 133 548.2829519693347 1094.551351005469 2 548.2819702029228 MULTI CID FTMS 0 0 0 6194 94184.34375 0.1226504469647636 67 -1.9383869171142576 2 Unmodified _TLHPVWSQQ_ ENSG00000214943|ENST00000399285|GPR33 14.218169984304629 0.4518140821082705 6 [{I|L}T]AYPEH[HK] 9 7 + 37.157 0.0 0.0 3.3948 3.3948 82.86 0.0 0.0 0.0 0.8476535684235387 20.118705200516025 0.8476535684235387 16.89522864113669 0 1.6989700043360187 0.0 0.3054621874040891 0.0 [{I|L}T]AYPEH[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VSE[YV][HK];[{I|L}T]H[WH]H[HK];{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}A{[CP]|[EA]}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P[{I|L}T]EH[HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T]PEH[HK];{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}RMP;[HS][VP]E[YV][HK];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}PA{M(Oxidation (M))|F}[YV][HK];{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F}{[MG]|[TS]}VP 3.3948;1.8512;1.7959;1.6054;1.4952;1.4538;1.4449;0.58405;0.56419;0.38599 -;-;-;-;-;-;-;-;-;- 803 1 1.684 78394.8 1.0 1182 5012 6194 SUDHL4_400M_050219_2,6196 SUDHL4_400M_050219_2,6196,TLHPVWSQQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6197 30.536 141.0 549940.0 25 0 35430.0 -1 RMQKEITAL 9 104 553.3054826561685 1104.5964123791368 2 553.3054687380791 MULTI CID FTMS 0 0 0 6194 451766.03125 0.4438193078494223 -3 0.1879692077636718 3 Oxidation (M) _RM(Oxidation (M))QKEITAL_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 38.17557092003332 0.0854718145212029 6 [TA]{I|L}HHE{I|L}TA{I|L} 10 -1 + 71.667 0.0 0.0 6.4881 6.4881 85.799 0.0 0.0 0.0 16.505149978319906 16.53212513775344 16.505149978319906 5.362427068383198 0 1.1307196863200843 1.5228787452803376 0.3807196863200844 0.0 [TA]{I|L}HHE{I|L}TA{I|L};[TA][TA]SKE{I|L}TA{I|L};[TA]{I|L}HHET{I|L}A{I|L};[TA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KE{I|L}TA{I|L};[TA][TA]SKET{I|L}A{I|L};[{I|L}T]AHHE{I|L}TA{I|L};[TA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KET{I|L}A{I|L};[TA][RN][{M(Oxidation (M))|F}V]{I|L}TA{I|L};[TA]G{[NV]|[RG]}[{M(Oxidation (M))|F}V]{I|L}TA{I|L};[TA]{I|L}HH[{I|L}T]EA{I|L} 6.4881;6.0026;5.827;5.4073;5.3415;4.9938;4.7462;4.7282;4.5584;4.4459 -;-;-;-;-;-;-;-;-;- 842 1 1.684 61840.0 1.0 1183 5012 6194 SUDHL4_400M_050219_2,6197 SUDHL4_400M_050219_2,6197,RMQKEITAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6198 30.54 220.0 365530.0 25 0 31786.0 + + 23252 RLNEAAVTV 9 102 486.7770714896896 971.5395900461792 2 486.7768127322197 MULTI CID FTMS 0 0 0 6194 244212.546875 0.3602260470098865 -2 0.1443920135498047 4 Unmodified _LSVICELPV_ nc|ENSG00000166946|O95273-2|CCNDBP1;ENST00000566833.1_1_15:43477651-43481519:+|nuORF;ENSG00000166946|ENST00000300213|CCNDBP1 30.22481116460888 0.1466181017706357 6 {[TV]|[{I|L}S]}V{[{M(Oxidation (M))|F}H]|[RQ]}AVTV 9 -1 + 66.594 0.0 0.0 6.8545 6.8545 95.772 0.0 0.0 0.0 17.727562184969372 46.96826162587499 17.727562184969372 66.59408610718386 0 0.8807196863200843 1.6989700043360187 0.6694451763165201 0.0 {[TV]|[{I|L}S]}V{[{M(Oxidation (M))|F}H]|[RQ]}AVTV 6.8545 - 221 1 1.684 66063.2 1.0 1184 5012 6194 SUDHL4_400M_050219_2,6198 SUDHL4_400M_050219_2,6198,LSVICELPV False False RLNEAAVTV 30.540022 486.77681273222 3030932.5 6194.0 nc|ENSG00000166946|O95273-2|CCNDBP1;;ENST00000566833.1_1_15:43477651-43481519:+|nuORF;;ENSG00000166946|ENST00000300213|CCNDBP1 3.3624955813090005 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6199 30.547 385.0 104800.0 25 0 8669.9 -1 RPMEVFMC 8 65 514.7223105615592 1027.4300681899183 2 514.7225829958916 MULTI CID FTMS 0 0 0 6194 102130.78125 0.8041373823426667 -1 0.0726776123046875 5 Oxidation (M) _RPMEVFM(Oxidation (M))C_ ENSG00000079332|ENST00000373241|SAR1A;nc|ENSG00000079332|Q9NR31-2|SAR1A 7.910154910731844 0.7763180056447161 6 GT 2 -1 15.217 0.0 0.0 1.481 0.0 0.0 211.04787932448704 655.2835177057249 866.331397030212 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 GT 1.481 - 20 + 1 1.684 39406.5 1.0 1185 5012 6194 SUDHL4_400M_050219_2,6199 SUDHL4_400M_050219_2,6199,RPMEVFMC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6200 30.554 418.0 133440.0 25 0 8759.8 + 8101 EPGARTPVA 9 109 449.24335631565503 896.4721596981101 2 449.2428161501884 MULTI CID FTMS 0 0 0 6194 101801.828125 1.0 0 0.0 6 Unmodified _EPGARTPVA_ nc|ENSG00000077327|O75602-3|SPAG6 38.17557092003332 0.0854718145212029 6 [EP]GAR[PS]A{I|L} 9 3 + 46.805 0.0 0.0 5.221 5.221 86.798 0.0 0.0 0.0 31.320320341894075 3.978991888276832 3.978991888276832 9.532796692927263 0 0.9604093769761876 1.5228787452803376 0.0 0.0 [EP]GAR[PS]A{I|L};[EP]QR[PS]A{I|L};[WP]A[VG][PS]A{I|L} 5.221;4.1576;1.4606 -;-;- 85 + 1 1.684 48347.3 1.0 1186 5012 6194 SUDHL4_400M_050219_2,6200 SUDHL4_400M_050219_2,6200,EPGARTPVA True False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 6201 30.563 468.0 199950.0 25 0 27943.0 + 107 AAIKPGTPL 9 96 434.2693661496879 866.5241793661758 2 434.2695190310478 MULTI CID FTMS 0 0 0 6194 100465.6171875 1.0 0 0.0 7 Unmodified _AAIKPGTPL_ ENSG00000114686|ENST00000264995|MRPL3 26.88365393820708 0.1891292719743517 6 AA{I|L}Q[RV][{I|L}P] 8 4 + 19.098 0.0 0.0 2.2039 2.2039 81.354 0.0 0.0 0.0 6.650378042405906 7.107952948012656 6.650378042405906 19.097652991372843 0 0.8182503180159344 1.3979400086720375 0.0 0.0 AA{I|L}Q[RV][{I|L}P] 2.2039 - 32 1 1.684 77311.8 1.0 1187 5012 6194 SUDHL4_400M_050219_2,6201 SUDHL4_400M_050219_2,6201,AAIKPGTPL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6202 30.568 276.0 265840.0 25 0 23547.0 + 31576 RQPDSGISSI 10 98 530.2769060338204 1058.5392591344407 2 530.2776977419853 MULTI CID FTMS 0 0 0 6194 207515.90625 0.6928009621683509 -1 0.0726776123046875 8 Unmodified _RQPDSGISSI_ ENSG00000163902|ENST00000296255|RPN1 49.52724829834842 0.0829255630816734 6 {[CA]|SS}{I|L}[PG]AAG{I|L}SS{I|L} 12 6 + 69.69 0.0 0.0 6.5836 6.5836 86.901 0.0 0.0 0.0 8.187587626244131 12.914930551903232 8.187587626244131 6.611814434466197 0 1.305462187404089 0.6575773191777937 1.6237125054200234 0.0 {[CA]|SS}{I|L}[PG]AAG{I|L}SS{I|L};{[CA]|SS}{I|L}[PG]AQ{I|L}SS{I|L};{[WT]|[RM]}[PG]AAG{I|L}SS{I|L};{[TV]|[{I|L}S]}S{[QN]|[E{I|L}]|[KN]}[HS]SS{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}[DP]SG{I|L}SS{I|L};{[CA]|SS}{I|L}{[QN]|[E{I|L}]|[KN]}[HS]SS{I|L};{[TV]|[{I|L}S]}[TA][HM]{I|L}SS{I|L};{[WT]|[RM]}[PG]AQ{I|L}SS{I|L};{[CA]|SS}VV[HM]{I|L}SS{I|L};{[TV]|[{I|L}S]}S{[QN]|[E{I|L}]|[KN]}[VP]DS{I|L} 6.5836;5.959;5.8101;5.6803;5.6613;5.4732;5.2653;5.1889;5.0583;5.0362 -;-;-;-;+;-;-;-;-;- + 526 1 1.684 64418.2 1.0 1188 5012 6194 SUDHL4_400M_050219_2,6202 SUDHL4_400M_050219_2,6202,RQPDSGISSI True True RQPDSGISSI 30.567761 530.277697741985 1869144.5 6194.0 ENSG00000163902|ENST00000296255|RPN1 6.1742262840271 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6203 30.573 257.0 351200.0 25 0 61342.0 + 16139 ITTTSKGLLA 10 95 502.8041920479138 1003.5938311626276 2 503.3058349490166 MULTI CID FTMS 0 0 0 6194 160262.125 0.8555172685306902 -1 0.0726776123046875 9 Unmodified _ITTTSKGLLA_ REV__ENST00000354911.8_2_10:28822518-28879725:+|nuORF 9.38312468134398 0.6832340498775793 6 [{I|L}T]VPP 5 -1 25.432 0.0 0.0 2.5341 0.0 0.0 0.0 493.24140344791255 493.24140344791255 11.936974992327125 0.0 0.0 0.0 0 0.25 0.8239087409443188 0.0 0.0 [{I|L}T]VPP 2.5341 - 135 + 1 1.684 72902.7 1.0 1189 5012 6194 SUDHL4_400M_050219_2,6203 SUDHL4_400M_050219_2,6203,ITTTSKGLLA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6204 30.58 427.0 206840.0 25 0 76104.0 -1 0 94 470.2568829018801 469.2496064352801 1 470.2566100955009 MULTI CID FTMS 0 0 0 6194 136788.90625 1.0 0 0.0 10 6 {I|L} 1 -1 13.979 0.0 0.0 2.9791 0.0 0.0 338.15464901516134 0.0 338.15464901516134 0.0 3.383468048124332 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.9791 - 21 + 1 1.684 76596.1 1.0 1190 5012 6194 SUDHL4_400M_050219_2,6204 SUDHL4_400M_050219_2,6204, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6205 30.595 800.0 132790.0 25 0 12792.0 + 6348 DVNNNEYHFEY 11 113 722.2954419698841 1442.576331006568 2 722.2961303591728 MULTI CID FTMS 0 0 0 6194 131860.53125 1.0 0 0.0 11 Unmodified _DVNNNEYHFEY_ REV__ENSG00000137760|ENST00000428149|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-2|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-3|ALKBH8;REV__nc|ENSG00000137760|Q96BT7-4|ALKBH8 10.799506525563784 0.8105043987015127 6 [QA]HD[DP]QA[HD]{M(Oxidation (M))|F}Y 12 -1 + 72.138 0.0 0.0 5.0006 5.0006 79.607 0.0 0.0 0.0 3.168464195985152 41.96063146421345 3.168464195985152 3.807196863200844 0 3.4291746928241125 0.0 0.805462187404089 0.5 [QA]HD[DP]QA[HD]{M(Oxidation (M))|F}Y;[QA]HD[DP]Q[HD]A{M(Oxidation (M))|F}Y;[QA]HDE[NP][HD]A{M(Oxidation (M))|F}Y;[QA]HD[DP][HD]QA{M(Oxidation (M))|F}Y;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P[SG]QQAEA[QA]Y;[QA]HDE[NP]A[HD]{M(Oxidation (M))|F}Y;[QA]HD[DP]Q[YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}Y;[QA]HD[DP]Q[WH]{M(Oxidation (M))|F}Y;[QA]HDE[NP][WH]{M(Oxidation (M))|F}Y;[QA]HDE[NP][YC(Carbamidomethyl (C))]{M(Oxidation (M))|F}Y 5.0006;4.7367;4.719;4.7031;4.4335;4.3724;4.2784;4.2784;4.2607;4.2607 -;-;-;-;-;-;-;-;-;- 2328 1 1.684 79905.0 0.5600000023841858 1191 5012 6194 SUDHL4_400M_050219_2,6205 SUDHL4_400M_050219_2,6205,DVNNNEYHFEY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6206 30.603 422.0 67467.0 25 0 5199.7 + 35329 SSYANDIYL 9 76 523.2441446045891 0 523.2437621951103 PEAK CID FTMS 0 0 0 6194 99429.8203125 1.0 0 0.0 12 Unmodified _SSYANDIYL_ REV__ENSG00000169933|ENST00000675598|FRMPD4;REV__nc|ENSG00000169933|Q14CM0|FRMPD4 7.289230182591677 0.3433663536648894 6 {I|L} 1 -1 6.9897 0.0 0.0 0.66921 0.0 0.0 347.0652412582031 581.3044527643186 928.3696940225218 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.66921 + + 15 + 1 1.684 31196.2 1.0 1192 5012 6194 SUDHL4_400M_050219_2,6206 SUDHL4_400M_050219_2,6206,SSYANDIYL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6208 30.608 52.0 943860.0 25 0 151800.0 + 8950 FAMNDESVFY 10 58 611.7596076675779 1221.5046624019558 2 611.7599365115166 MULTI CID FTMS 0 0 0 6207 935343.5 0.555643236068854 1 -0.0089073181152343 1 Unmodified _FAMNDESVFY_ REV__ENSG00000186501|ENST00000374076|TMEM222 13.90604991867851 0.6142120002215601 6 [HD]{[CP]|[EA]}QQNA{M(Oxidation (M))|F}Y 10 -1 + 65.718 0.0 0.0 5.3801 5.3801 85.431 0.0 0.0 0.0 4.259687322722812 56.76599703664159 4.259687322722812 9.164539485499256 0 1.0 0.0 0.0 0.7302046884880937 [HD]{[CP]|[EA]}QQNA{M(Oxidation (M))|F}Y;[HD]{[CP]|[EA]}[AG]QNA{M(Oxidation (M))|F}Y;[HD]{[CP]|[EA]}Q[AG]NA{M(Oxidation (M))|F}Y;[HD]{[CP]|[EA]}QQGGA{M(Oxidation (M))|F}Y 5.3801;4.6299;4.6299;4.6299 -;-;-;- 145 1 1.684 42320.9 1.0 1193 5013 6207 SUDHL4_400M_050219_2,6208 SUDHL4_400M_050219_2,6208,FAMNDESVFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6209 30.612 191.0 514580.0 25 0 227970.0 -1 0 81 492.26224254213616 491.2549660755362 1 492.2625610232353 MULTI CID FTMS 0 0 0 6207 257031.796875 0.6703579198361217 -3 0.2285575866699218 2 6 GG{M(Oxidation (M))|F} 3 -1 15.406 0.0 0.0 3.1361 0.0 0.0 212.1324512823705 0.0 212.1324512823705 0.0 2.9318250140072184 0.0 0.0 0 0.0 0.0 0.0 0.0 GG{M(Oxidation (M))|F} 3.1361 - 29 + 1 1.684 81758.7 1.0 1194 5013 6207 SUDHL4_400M_050219_2,6209 SUDHL4_400M_050219_2,6209, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6211 30.617 149.0 551220.0 25 0 43704.0 + 30968 RLAQHITYV 9 73 550.8145177812619 1099.6144826293237 2 550.8141967654228 MULTI CID FTMS 0 0 0 6210 512342.5625 0.8441034385646244 -1 0.0089073181152343 1 Unmodified _RLAQHITYV_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7 36.12702656103203 0.0967173616627612 6 H{I|L}TYV 5 4 54.906 0.0 0.0 4.9932 0.0 0.0 468.2831713691599 0.0 468.2831713691599 0.0 44.421366803513706 0.0 0.0 0 1.0709991640913 0.0 0.9247425010840048 0.0 + H{I|L}TYV 4.9932 + + 56 1 1.684 66282.1 1.0 1195 5014 6210 SUDHL4_400M_050219_2,6211 SUDHL4_400M_050219_2,6211,RLAQHITYV True True RLAQHITYV 30.617086 550.814196765423 3057443.5 6210.0 nc|ENSG00000166508|P33993-3|MCM7;;ENSG00000166508|ENST00000303887|MCM7 4.402999083201091 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6212 30.62 148.0 308870.0 25 0 32534.0 + 40630 VLDDSTAKL 9 78 481.2644011674465 960.5142494016932 2 481.2636596560478 MULTI CID FTMS 0 0 0 6210 215139.328125 0.9586438321142676 -3 0.165750503540039 2 Unmodified _VLDDSTAKL_ ENSG00000015133|ENST00000389857|CCDC88C 20.41453444215458 0.284085796332423 6 V{I|L}DD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}K{I|L} 8 3 + 53.633 0.0 0.0 5.5838 5.5838 77.132 0.0 0.0 0.0 41.64320017660792 0.9421249706470292 0.9421249706470292 0.5115252244738144 0 0.4247425010840047 2.0 0.0 0.0 V{I|L}DD{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}K{I|L};V{I|L}DD{[MG]|[TS]}AK{I|L};V{I|L}DD[RK]C{I|L};V{I|L}[EP][Y{I|L}]D{I|L};V[WD]{[ET]|[MV]}AK{I|L} 5.5838;5.5305;5.1695;2.9992;1.4206 -;+;-;-;- + 134 + 1 1.684 41346.8 1.0 1196 5014 6210 SUDHL4_400M_050219_2,6212 SUDHL4_400M_050219_2,6212,VLDDSTAKL False True VLDDSTAKL 30.620032 481.263659656048 998940.8125 6210.0 ENSG00000015133|ENST00000389857|CCDC88C 5.765193939208984 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6213 30.622 81.0 616970.0 25 0 57571.0 + 35264 SSFIGKVKS 9 74 476.77677470375 951.5389964743 2 476.7767516970634 MULTI CID FTMS 0 0 0 6210 482743.0 0.2925912428944073 -5 0.2810420989990234 3 Unmodified _SSFIGKVKS_ REV__ENST00000335500.8_1_17:42474164-42474308:-|nuORF 22.736283301280096 0.2418982879461534 6 {[CA]|SS}{M(Oxidation (M))|F}{I|L}SKVGK 9 -1 + 40.068 0.0 0.0 4.2109 4.2109 86.943 0.0 0.0 0.0 25.46417691358733 9.256820931039169 9.256820931039169 40.068270683349205 0 0.7614393726401688 0.0 0.2887254899964357 0.1307196863200844 {[CA]|SS}{M(Oxidation (M))|F}{I|L}SKVGK 4.2109 - 92 + 1 1.684 43071.2 1.0 1197 5014 6210 SUDHL4_400M_050219_2,6213 SUDHL4_400M_050219_2,6213,SSFIGKVKS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6214 30.632 570.0 100690.0 25 0 7725.2 -1 0 71 631.9715056623336 1892.8926875872007 3 632.3065063357353 MULTI CID FTMS 0 0 0 6210 140642.21875 1.0 0 0.0 4 6 PDQ 3 -1 47.99 0.0 0.0 2.5353 0.0 0.0 1534.7438276054609 0.0 1534.7438276054609 0.0 22.30327215271494 0.0 0.0 0 1.0 0.0 0.75 0.7302046884880937 PDQ 2.5353 - 134 + 1 1.684 47825.2 1.0 1198 5014 6210 SUDHL4_400M_050219_2,6214 SUDHL4_400M_050219_2,6214, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6215 30.646 800.0 90924.0 25 0 7963.9 + -1 ICPFFECTSLY 11 85 718.8162471109678 1435.6179412887354 2 718.8165771365166 MULTI CID FTMS 0 0 0 6210 90522.2890625 0.870900105130183 1 -0.0341243743896484 5 2 Carbamidomethyl (C) _IC(Carbamidomethyl (C))PFFEC(Carbamidomethyl (C))TSLY_ REV__ENST00000565695.2_1_6:101329383-101329548:+|nuORF 6.2057823575117 0.8458686499021061 6 ANQQAEH{M(Oxidation (M))|F}Y 9 -1 68.409 0.0 0.0 4.7651 0.0 0.0 329.1435945683112 0.0 329.1435945683112 0.0 50.97418457616534 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.4247425010840047 ANQQAEH{M(Oxidation (M))|F}Y 4.7651 - 1267 + 1 1.684 57780.0 0.4699999988079071 1199 5014 6210 SUDHL4_400M_050219_2,6215 SUDHL4_400M_050219_2,6215,ICPFFECTSLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6217 30.66 658.0 83934.0 25 0 9284.9 + -1 LNDLQDKMQF 10 89 634.3028081654219 1266.5910633976437 2 634.3020507693291 MULTI CID FTMS 0 0 0 6216 72005.4921875 0.7918131765841521 2 -0.0439605712890625 1 Oxidation (M) _LNDLQDKM(Oxidation (M))QF_ REV__ENSG00000136634|ENST00000423557|IL10 29.081581746732265 0.3152867722954398 6 QP{I|L}AEEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 62.063 0.0 0.0 4.9 0.0 0.0 88.05317122627109 0.0 88.05317122627109 0.0 48.083362792012 0.0 0.0 0 0.8296896906561032 0.0 0.3494850021680094 1.2302046884880935 QP{I|L}AEEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 4.9 - 369 1 1.684 47424.9 1.0 1200 5015 6216 SUDHL4_400M_050219_2,6217 SUDHL4_400M_050219_2,6217,LNDLQDKMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6218 30.667 427.0 269360.0 25 0 38903.0 + 11920 GLYVPSLAPH 10 103 527.2900311335662 1052.5655093339324 2 527.2905151247978 MULTI CID FTMS 0 0 0 6216 136283.453125 0.2929293400833838 -4 0.1998748779296875 2 Unmodified _GLYVPSLAPH_ REV__ENSG00000183161|ENST00000327470|FANCF 20.453626601364224 0.5043500229302764 6 {[VA]|[{I|L}G]}YPV 5 -1 41.845 0.0 0.0 3.9755 0.0 0.0 0.0 520.2539156549436 520.2539156549436 22.344647141164447 0.0 0.0 0.0 0 0.6861818737241735 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}YPV 3.9755 - 167 + 1 1.684 95273.2 1.0 1201 5015 6216 SUDHL4_400M_050219_2,6218 SUDHL4_400M_050219_2,6218,GLYVPSLAPH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6219 30.672 236.0 411780.0 25 0 69756.0 -1 0 95 473.2590521412895 472.2517756746895 1 473.2586242556572 MULTI CID FTMS 0 0 0 6216 198316.125 0.0444114781907657 -7 0.3662681579589844 3 6 V 1 -1 12.764 0.0 0.0 2.7028 0.0 0.0 355.1723517018364 0.0 355.1723517018364 0.0 3.6155184202636894 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.7028 - 21 + 1 1.684 83409.9 1.0 1202 5015 6216 SUDHL4_400M_050219_2,6219 SUDHL4_400M_050219_2,6219, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6220 30.686 800.0 43431.0 25 0 12658.0 -1 0 27 1185.8270411193614 3554.4592939582844 3 1186.496630847454 MULTI CID FTMS 0 0 0 6216 73923.1640625 0.6709434845269814 -5 0.2715892791748047 4 6 G 1 -1 2.4743 0.0 0.0 0.06961 0.0 0.0 3207.394426870197 287.0185946100219 3494.413021480219 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.06961 - 1 + 1 1.684 37558.6 0.3000000119209289 1203 5015 6216 SUDHL4_400M_050219_2,6220 SUDHL4_400M_050219_2,6220, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6223 30.707 800.0 128470.0 25 0 9527.0 + -1 FHNLNYWCQYF 11 81 796.3417790539611 1590.669005174722 2 796.8434326052666 MULTI CID FTMS 0 0 0 6222 85675.6484375 0.3401079105007895 -3 0.0780849456787109 1 Carbamidomethyl (C) _FHNLNYWC(Carbamidomethyl (C))QYF_ REV__L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|122|1|anti-sense 2.9952420565917617 0.861016188266951 6 {M(Oxidation (M))|F}ANQQAED[MT]Q 11 -1 78.035 0.0 0.0 4.9058 0.0 0.0 309.13362504956064 0.0 309.13362504956064 0.0 66.26342635025719 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.805462187404089 {M(Oxidation (M))|F}ANQQAED[MT]Q 4.9058 - 2232 + 1 1.684 75905.7 0.449999988079071 1204 5017 6222 SUDHL4_400M_050219_2,6223 SUDHL4_400M_050219_2,6223,FHNLNYWCQYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6224 30.715 411.0 121660.0 25 0 8777.7 + 17171 KLIQESPTV 9 91 507.7952103914998 1013.5758678497996 2 507.7956725955009 MULTI CID FTMS 0 0 0 6222 89738.328125 0.7414929599358391 1 -0.0388641357421875 2 Unmodified _KLIQESPTV_ ENSG00000166037|ENST00000325542|CEP57;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;nc|ENSG00000166037|Q86XR8-2|CEP57;nc|ENSG00000166037|Q86XR8-4|CEP57;nc|ENSG00000166037|Q86XR8-5|CEP57 53.832793166522166 0.0319663582346103 6 [Q{I|L}][K{I|L}]ESPTV 9 2 [Q{I|L}][K{I|L}]E + + 43.805 -12.765 -2.0879 4.3218 4.3218 55.077 0.0 0.0 0.0 0.0 24.76378648475686 0.0 0.0 0 1.5 0.0 0.6382104921644451 0.0 [Q{I|L}][K{I|L}]ESPTV 4.3218 - 131 + 1 1.684 45274.1 1.0 1205 5017 6222 SUDHL4_400M_050219_2,6224 SUDHL4_400M_050219_2,6224,KLIQESPTV True True KLIQESPTV 30.714709 507.795672595501 642776.375 6222.0 nc|ENSG00000166037|Q86XR8-4|CEP57;;nc|ENSG00000166037|Q86XR8-5|CEP57;;ENST00000539855.5_1_11:95532492-95564417:+|nuORF;;nc|ENSG00000166037|Q86XR8-2|CEP57;;ENSG00000166037|ENST00000325542|CEP57 7.187338352203369 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6225 30.729 800.0 115100.0 25 0 10623.0 + + 40137 RLGVISKV 8 125 436.2901712646181 870.5657895960361 2 436.2903320193291 MULTI CID FTMS 0 0 0 6222 100723.25 1.0 0 0.0 3 Unmodified _VGLRSLVK_ ENSG00000092148|ENST00000399332|HECTD1 21.74664581756881 0.5868176546531598 6 S{I|L} 2 -1 19.693 0.0 0.0 2.2621 0.0 0.0 245.1748338964804 422.25180412509707 667.4266380215774 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.3807196863200844 0.0 S{I|L} 2.2621 + + 75 + 1 1.684 74622.9 0.4199999868869781 1206 5017 6222 SUDHL4_400M_050219_2,6225 SUDHL4_400M_050219_2,6225,VGLRSLVK False False RLGVISKV 30.728525 436.290332019329 363986.9375 6222.0 ENSG00000092148|ENST00000399332|HECTD1 0.7243324120839437 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6227 30.738 367.0 247030.0 25 0 32937.0 + 19736 LGPPRLAPG 9 92 439.266509429665 876.51846592613 2 439.2666503787041 MULTI CID FTMS 0 0 0 6226 136381.609375 0.0411609587495884 103 -2.421609878540039 1 Unmodified _LGPPRLAPG_ REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF 16.942295170755138 0.3780752226737986 6 {[VA]|[{I|L}G]}PPA 5 -1 39.565 0.0 0.0 4.5139 0.0 0.0 0.0 438.24740479402254 438.24740479402254 32.53083433768431 0.0 0.0 0.0 0 0.2742275032520141 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.5139 - 59 + 1 1.684 74759.6 1.0 1207 5018 6226 SUDHL4_400M_050219_2,6227 SUDHL4_400M_050219_2,6227,LGPPRLAPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6228 30.745 416.0 176670.0 25 0 18302.0 + 11283 GEVDVEQHTL 10 110 563.7723282224122 1125.5301035116242 2 563.7725097537041 MULTI CID FTMS 0 0 0 6226 146752.09375 0.3495555252022886 -4 0.1169490814208984 2 Unmodified _GEVDVEQHTL_ ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1 90.13494162714682 0.0093239051209448 6 {[DA]|[EG]}VDVEQHT{I|L} 10 0 + 99.538 0.0 0.0 8.8437 8.8437 95.881 0.0 0.0 0.0 49.90434071560014 14.92709561538885 14.92709561538885 12.219161359540152 0 1.620371515030528 1.6989700043360187 2.504432191740108 0.3054621874040891 + + {[DA]|[EG]}VDVEQHT{I|L};{[DA]|[EG]}VDVE[AG]HT{I|L};{[DA]|[EG]}VDV[WH]VW;{[DA]|[EG]}VDAHT{I|L}V{[DA]|[EG]};{[DA]|[EG]}VDAHTV{I|L}{[DA]|[EG]};{[DA]|[EG]}VD[{M(Oxidation (M))|F}V][RH][PA];WVDV[H{I|L}][CS][PA];[DV]ADV[WH]VW;[DV]ADAHT{I|L}V{[DA]|[EG]};{NN|[MP]|[D{I|L}]|[EV]}GDAHT{I|L}VW 8.8437;7.7581;5.3366;5.2459;5.0894;4.5933;4.3636;4.201;4.1103;4.0172 +;-;-;-;-;-;-;-;-;- + 2429 + 1 1.684 60386.0 1.0 1208 5018 6226 SUDHL4_400M_050219_2,6228 SUDHL4_400M_050219_2,6228,GEVDVEQHTL True True GEVDVEQHTL 30.745091 563.772509753704 4211561.5 6226.0 ENSG00000134057|ENST00000256442|CCNB1;;ENSG00000157456|ENST00000288207|CCNB2;;nc|ENSG00000134057|P14635-2|CCNB1 8.673132101694742 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6229 30.751 310.0 240630.0 25 0 24837.0 + 25840 NLDPAVHEV 9 98 497.25335097431554 992.4921490154312 2 497.2523681521416 MULTI CID FTMS 0 0 0 6226 132939.015625 0.1700783974911523 -6 0.21002197265625 3 Unmodified _NLDPAVHEV_ ENSG00000198522|ENST00000610189|GPN1;ENST00000461249.1_1_2:27852141-27855513:+|nuORF;ENST00000478484.5_1_2:27851925-27854072:+|nuORF;ENST00000503738.5_1_2:27851561-27855513:+|nuORF;nc|ENSG00000198522|Q9HCN4-4|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1 52.268347100219714 0.0353964759249114 6 {[QV]|[N{I|L}]|[RA]|[KV]}DPAVS 7 3 55.084 0.0 0.0 5.5501 0.0 0.0 0.0 293.1254061334594 293.1254061334594 42.42207850744741 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.7059771852360797 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}DPAVS 5.5501 - 309 + 1 1.684 59725.0 1.0 1209 5018 6226 SUDHL4_400M_050219_2,6229 SUDHL4_400M_050219_2,6229,NLDPAVHEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6230 30.759 469.0 194020.0 25 0 30279.0 + 12739 GVNKLGVPA 9 108 427.7585310754444 853.5025092176888 2 427.7585021853447 MULTI CID FTMS 0 0 0 6226 105363.7890625 0.1492232682239939 6 -0.189178466796875 4 Unmodified _GVNKLGVPA_ REV__ENSG00000155313|ENST00000400183|USP25;REV__nc|ENSG00000155313|Q9UHP3-1|USP25;REV__nc|ENSG00000155313|Q9UHP3|USP25 23.1484247019978 0.2366544122328345 6 PAV 3 -1 14.385 0.0 0.0 1.6855 0.0 0.0 568.3334214978767 0.0 568.3334214978767 0.0 5.116115387519255 0.0 0.0 0 0.5 0.0 0.0 0.0 PAV 1.6855 - 85 + 1 1.684 75835.4 1.0 1210 5018 6226 SUDHL4_400M_050219_2,6230 SUDHL4_400M_050219_2,6230,GVNKLGVPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6232 30.775 800.0 62176.0 25 0 2648.2 + -1 ASTDYSTYSQAAA 13 95 689.2935974869537 1376.5726420407073 2 689.2938720583916 MULTI CID FTMS 0 0 0 6231 58904.421875 0.6548533478158269 1 -0.0302295684814453 1 Carbamidomethyl (C) _DSTYRC(Carbamidomethyl (C))SYQPT_ nc|ENSG00000182944|Q01844-6|EWSR1;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;nc|ENSG00000182944|Q01844-5|EWSR1;nc|ENSG00000182944|Q01844-4|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;nc|ENSG00000182944|Q01844-2|EWSR1;ENSG00000182944|ENST00000397938|EWSR1 5.731851221503515 0.8481046878870278 6 DT 2 -1 12.703 0.0 0.0 0.9228 0.0 0.0 978.4292282598448 179.04609094791252 1157.4753192077574 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6505149978319906 0.0 DT 0.9228 - 469 + 1 1.684 41934.2 0.449999988079071 1211 5019 6231 SUDHL4_400M_050219_2,6232 SUDHL4_400M_050219_2,6232,DSTYRCSYQPT False False ASTDYSTYSQAAA 30.775408 689.293872058392 591811.5625 6231.0 nc|ENSG00000182944|Q01844-6|EWSR1;;ENST00000483415.5_1_22:29664325-29684776:+|nuORF;;ENST00000485037.5_1_22:29664325-29670342:+|nuORF;;nc|ENSG00000182944|Q01844-5|EWSR1;;nc|ENSG00000182944|Q01844-4|EWSR1;;nc|ENSG00000182944|Q01844-3|EWSR1;;nc|ENSG00000182944|Q01844-2|EWSR1;;ENSG00000182944|ENST00000397938|EWSR1 2.2975244522094727 2.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6233 30.789 800.0 85646.0 25 0 5790.6 -1 MCVNIFFYAYF 11 81 745.8306969403346 1489.6468409474692 2 745.8300048708916 MULTI CID FTMS 0 0 0 6231 83021.9765625 1.0 0 0.0 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))C(Carbamidomethyl (C))VNIFFYAYF_ ENSG00000154025|ENST00000395645|SLC5A10;nc|ENSG00000154025|A0PJK1-2|SLC5A10;nc|ENSG00000154025|A0PJK1-3|SLC5A10;nc|ENSG00000154025|A0PJK1-4|SLC5A10;nc|ENSG00000154025|A0PJK1-5|SLC5A10 9.38312468134398 0.8308777417566128 6 HDEAQQDA{M(Oxidation (M))|F}Y 10 -1 78.25 0.0 0.0 5.253 0.0 0.0 267.15840346504064 0.0 267.15840346504064 0.0 61.26078152608656 0.0 0.0 0 1.3182503180159344 0.0 0.6307196863200843 0.8494850021680094 HDEAQQDA{M(Oxidation (M))|F}Y 5.253 - 363 1 1.684 54074.8 0.4399999976158142 1212 5019 6231 SUDHL4_400M_050219_2,6233 SUDHL4_400M_050219_2,6233,MCVNIFFYAYF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6235 30.794 41.0 949810.0 25 0 105500.0 8645 EVEEDEYKAFY 11 60 711.3068376421643 1420.5991223511285 2 711.3077880740166 MULTI CID FTMS 0 0 0 6234 1152770.0 0.0711512106266431 8 -0.3066234588623047 1 Unmodified _EVEEDEYKAFY_ ENSG00000166598|ENST00000299767|HSP90B1;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;ENST00000550479.1_1_12:104332030-104335334:+|nuORF 12.240655878213236 0.7805268987462184 6 [QA]HDEAQQNA{M(Oxidation (M))|F}Y 12 8 + 66.481 0.0 0.0 4.6798 4.6798 77.481 0.0 0.0 0.0 5.061668675368622 49.49146580189776 5.061668675368622 3.0102999566398125 0 0.8935078169319297 0.0 0.0 0.8494850021680094 [QA]HDEAQQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]QNA{M(Oxidation (M))|F}Y;[QA]HDEAQ[AG]NA{M(Oxidation (M))|F}Y;[QA]HDEAQQGGA{M(Oxidation (M))|F}Y;[QA]HDEA[AG]NQA{M(Oxidation (M))|F}Y;[QA]HDEAQGGQA{M(Oxidation (M))|F}Y;[QA]HDEAQN[AG]A{M(Oxidation (M))|F}Y;[QA]E[HD]AQQNA{M(Oxidation (M))|F}Y;[HD][QA]EAQQNA{M(Oxidation (M))|F}Y 4.6798;4.4679;4.0393;4.0393;4.0393;3.8274;3.8274;3.8274;3.7676;3.7515 -;-;-;-;-;-;-;-;-;- 504 1 1.684 34098.7 1.0 1213 5020 6234 SUDHL4_400M_050219_2,6235 SUDHL4_400M_050219_2,6235,EVEEDEYKAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6236 30.799 234.0 209010.0 25 0 14598.0 + + -1 RMQKEITAL 9 81 553.3054826561685 1104.5964123791368 2 553.3054077029228 MULTI CID FTMS 0 0 0 6234 187313.34375 0.1840184361450614 5 -0.1621551513671875 2 2 Oxidation (M) _LM(Oxidation (M))ALPM(Oxidation (M))LTLA_ ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000107796|ENST00000224784|ACTA2;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000159251|ENST00000290378|ACTC1;nc|ENSG00000204434|Q9BYX7|POTEKP;ENSG00000143632|ENST00000366684|ACTA1;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB 20.453626601364224 0.5043500229302764 6 [TA][H{I|L}]HETA{I|L}{I|L} 10 -1 + 51.393 0.0 0.0 4.6526 4.6526 79.487 0.0 0.0 0.0 17.473024840566467 42.96388461952553 17.473024840566467 5.18513939877888 0 0.2059771852360797 1.5228787452803376 0.25 0.0 [TA][H{I|L}]HETA{I|L}{I|L};[TA][TA]SKETA{I|L}{I|L};[TA][HK][HN]TA{I|L}{I|L};[TA][H{I|L}]HE{I|L}TA{I|L};[TA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KETA{I|L}{I|L};[TA][TA]SKE{I|L}TA{I|L};[TA][RN][{M(Oxidation (M))|F}V]TA{I|L}{I|L};[TA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KE{I|L}TA{I|L};[TA]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}KE{[RE]|[WV]}{I|L};[R{M(Oxidation (M))|F}]{I|L}EQQTA{I|L} 4.6526;4.1832;4.0452;4.0198;4.0198;3.5504;3.5001;3.387;2.4354;1.6577 -;-;-;-;-;-;-;-;-;- 157 1 1.684 41774.9 1.0 1214 5020 6234 SUDHL4_400M_050219_2,6236 SUDHL4_400M_050219_2,6236,LMALPMLTLA False False RMQKEITAL 30.798695 553.305407702923 10587068.0 6234.0 ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000163017|ENST00000345517|ACTG2;;ENSG00000107796|ENST00000224784|ACTA2;;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;ENSG00000159251|ENST00000290378|ACTC1;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENSG00000075624|ENST00000646664|ACTB 6.343751112620036 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6237 30.801 136.0 339260.0 25 0 30589.0 + -1 TAADFCIFGT 10 75 551.7485882161901 1101.48262349918 2 551.7490722537041 MULTI CID FTMS 0 0 0 6234 321259.34375 0.8403785746318668 -2 0.0607357025146484 3 Carbamidomethyl (C) _TAADFC(Carbamidomethyl (C))IFGT_ REV__ENSG00000147481|ENST00000642720|SNTG1;REV__ENST00000524004.5_3_8:51571197-51621559:+|nuORF;REV__nc|ENSG00000147481|Q9NSN8-2|SNTG1 18.1463463914782 0.5430639438673815 6 [TA]ADY{I|L} 6 -1 48.901 0.0 0.0 4.4396 0.0 0.0 0.0 464.16431514010594 464.16431514010594 22.16190326687972 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [TA]ADY{I|L} 4.4396 - 104 + 1 1.684 41981.0 1.0 1215 5020 6234 SUDHL4_400M_050219_2,6237 SUDHL4_400M_050219_2,6237,TAADFCIFGT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6238 30.81 498.0 321840.0 25 0 24711.0 + -1 FQAPTAKEM 9 132 519.7500754910437 1037.4855980488874 2 519.7499267458916 MULTI CID FTMS 0 0 0 6234 219210.40625 1.0 0 0.0 4 Oxidation (M) _FQAPTAKEM(Oxidation (M))_ nc|ENSG00000125637|Q8NDX1-2|PSD4;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;ENSG00000125637|ENST00000245796|PSD4;ENST00000418251.6_1_2:113943320-113958989:+|nuORF 36.506200033944 0.094635877243972 6 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[{M(Oxidation (M))|F}T]PA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 -1 + 37.398 0.0 0.0 3.6047 3.6047 70.453 0.0 0.0 0.0 2.075352851790754 0.4271928637859901 0.4271928637859901 0.4271928637859901 0 0.0 1.0 0.6989700043360187 0.3807196863200844 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[{M(Oxidation (M))|F}T]PA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AS[HK]{[CA]|SS}{M(Oxidation (M))|F};[PA]TKEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[TP]AKEA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[PA]TKAE{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[PA]TK{M(Oxidation (M))|F}{M(Oxidation (M))|F}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[PA]TKEAT{[CA]|SS}{M(Oxidation (M))|F};[TP]AKAE{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[PA]TKETA{[CA]|SS}{M(Oxidation (M))|F};[TP]AK{M(Oxidation (M))|F}{M(Oxidation (M))|F}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3.6047;3.5635;3.4047;3.2747;3.2461;3.1784;3.1208;3.1161;3.0974;3.0484 -;-;-;-;-;-;-;-;-;- 1198 1 1.684 125082.9 1.0 1216 5020 6234 SUDHL4_400M_050219_2,6238 SUDHL4_400M_050219_2,6238,FQAPTAKEM False False FQAPTAKEM 30.810262 519.749926745892 1417533.625 6234.0 nc|ENSG00000125637|Q8NDX1-2|PSD4;;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;;ENSG00000125637|ENST00000245796|PSD4;;ENST00000418251.6_1_2:113943320-113958989:+|nuORF 6.024489084879558 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6240 30.82 393.0 147710.0 25 0 17034.0 + 33583 SINRSPVTV 9 85 486.7770714896896 971.5395900461792 2 486.7771179080009 MULTI CID FTMS 0 0 0 6239 68572.0234375 0.1011472557591536 7 -0.2856178283691406 1 Unmodified _SINRSPVTV_ REV__ENSG00000085465|ENST00000369732|OVGP1 19.256988751693697 0.3154191944385105 6 PAVTV 5 -1 27.703 0.0 0.0 2.8515 0.0 0.0 486.2463551251969 0.0 486.2463551251969 0.0 14.604093769761874 0.0 0.0 0 0.6989700043360187 0.0 0.0 0.0 PAVTV 2.8515 - 149 1 1.684 51519.6 1.0 1217 5021 6239 SUDHL4_400M_050219_2,6240 SUDHL4_400M_050219_2,6240,SINRSPVTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6241 30.827 414.0 215220.0 25 0 21901.0 + 25767 NIVERVKEV 9 108 543.3207436269602 1084.6269343207202 2 543.3209106326103 MULTI CID FTMS 0 0 0 6239 117815.578125 1.0 0 0.0 2 Unmodified _NIVERVKEV_ ENSG00000132274|ENST00000379965|TRIM22;ENST00000460454.1_1_11:5717462-5717939:+|nuORF;nc|ENSG00000132274|Q8IYM9-2|TRIM22 36.506200033944 0.094635877243972 6 {[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VEVQV 10 5 + 58.546 0.0 0.0 5.3978 5.3978 85.1 0.0 0.0 0.0 25.76483730104272 46.9174885966499 25.76483730104272 9.035984316004216 0 1.0916328861051037 2.0 0.3807196863200844 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VEVQV;{[QV]|[N{I|L}]|[RA]|[KV]}VESVVVQV;{[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VEV[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}V[VS]V{[QV]|[N{I|L}]|[RA]|[KV]}EV;{[QV]|[N{I|L}]|[RA]|[KV]}V[VS]VQQ[KA];{NN|[MP]|[D{I|L}]|[EV]}[RK]VEVQV;[{I|L}A]DRSVVVQV;{NN|[MP]|[D{I|L}]|[EV]}ARSVVVQV;{NN|[MP]|[D{I|L}]|[EV]}[RK]VEV[AG]V;{NN|[MP]|[D{I|L}]|[EV]}[RK]V{[QV]|[N{I|L}]|[RA]|[KV]}EV 5.3978;4.5647;4.5528;4.1506;2.7301;2.4171;1.9562;1.7463;1.5681;1.1699 -;-;-;-;-;-;-;-;-;- 131 1 1.684 71740.8 1.0 1218 5021 6239 SUDHL4_400M_050219_2,6241 SUDHL4_400M_050219_2,6241,NIVERVKEV True True NIVERVKEV 30.827235 543.32091063261 544117.625 6239.0 ENST00000460454.1_1_11:5717462-5717939:+|nuORF;;nc|ENSG00000132274|Q8IYM9-2|TRIM22;;ENSG00000132274|ENST00000379965|TRIM22 3.397763508061568 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6242 30.841 800.0 114220.0 25 0 13924.0 + -1 NQRCPCFYF 9 98 617.7597634887788 1233.5049740443576 2 617.7601806521416 MULTI CID FTMS 0 0 0 6239 98856.8125 0.9201818624355724 -1 0.021005630493164 3 Carbamidomethyl (C) _NQRC(Carbamidomethyl (C))PCFYF_ REV__ENST00000264645.11_1_17:38327543-38327843:+|nuORF 12.531546534597751 0.4974689918368763 6 EAQQNA{M(Oxidation (M))|F}Y 8 -1 60.214 0.0 0.0 4.8816 0.0 0.0 264.0861073224625 0.0 264.0861073224625 0.0 43.22473167784722 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 EAQQNA{M(Oxidation (M))|F}Y 4.8816 - 508 1 1.684 69634.8 0.5 1219 5021 6239 SUDHL4_400M_050219_2,6242 SUDHL4_400M_050219_2,6242,NQRCPCFYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6243 30.855 800.0 198850.0 25 0 21405.0 -1 CPNARCQFAFY 11 130 717.3073394128171 1432.600125892434 2 717.3082153201103 MULTI CID FTMS 0 0 0 6239 96278.9375 0.158743700722448 -5 0.1246662139892578 4 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PNARC(Carbamidomethyl (C))QFAFY_ ENSG00000129353|ENST00000335757|SLC44A2;ENST00000589561.5_1_19:10746968-10754058:+|nuORF;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;nc|ENSG00000129353|Q8IWA5-3|SLC44A2 13.90604991867851 0.7458848613461305 6 [AG]G{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y 13 -1 + 90.456 0.0 0.0 6.3141 6.3141 79.848 0.0 0.0 0.0 0.823512928371315 11.448658907276354 0.823512928371315 0.823512928371315 0 1.218765315847925 1.5228787452803376 0.6505149978319906 1.2302046884880935 [AG]G{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQNA{M(Oxidation (M))|F}Y;[NP]HDEAQQNA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;[AG]G{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}MEA[AG]QNA{M(Oxidation (M))|F}Y;[AG]D[WY]AQQNA{M(Oxidation (M))|F}Y 6.3141;6.2566;6.0963;5.6808;5.6808;5.6808;5.6215;5.6215;5.6215;5.5081 -;-;-;-;-;-;-;-;-;- 12616 1 1.684 116611.6 0.4699999988079071 1220 5021 6239 SUDHL4_400M_050219_2,6243 SUDHL4_400M_050219_2,6243,CPNARCQFAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6245 30.873 800.0 110930.0 25 0 4285.3 + 41911 VQFIGRESKY 10 128 409.5558365649475 1225.645680295043 3 409.5557433962822 MULTI CID FTMS 0 0 0 6244 81487.4296875 1.0 0 0.0 1 Unmodified _VQFIGRESKY_ ENSG00000109919|ENST00000302503|MTCH2 14.218169984304629 0.6089749286722269 6 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L} 4 6 20.005 0.0 0.0 1.6322 0.0 0.0 0.0 735.342838246139 735.342838246139 4.520534381044499 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{I|L} 1.6322 + + 153 + 1 1.684 75951.3 0.8500000238418579 1221 5022 6244 SUDHL4_400M_050219_2,6245 SUDHL4_400M_050219_2,6245,VQFIGRESKY False True VQFIGRESKY 30.872601 409.555743396282 488519.96875 6244.0 ENSG00000109919|ENST00000302503|MTCH2 3.2986629009246826 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6246 30.875 114.0 506630.0 25 0 113290.0 36485 TADGMAVA 8 86 368.1690934939053 0 368.1686584353447 PEAK CID FTMS 0 0 0 6244 288043.875 0.884751505341056 2 -0.0627822875976562 2 Unmodified _TADGMAVA_ ENSG00000111664|ENST00000229264|GNB3;nc|ENSG00000111664|P16520-2|GNB3 5.230669730166228 0.5807325378471833 6 {I|L} 1 8 6.9897 0.0 0.0 0.95186 0.0 0.0 154.05088122433568 464.1647795125102 618.2156607368458 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.95186 - 8 + 1 1.684 54969.5 1.0 1222 5022 6244 SUDHL4_400M_050219_2,6246 SUDHL4_400M_050219_2,6246,TADGMAVA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6247 30.889 800.0 145100.0 25 0 23204.0 + 31032 RLGSVNENL 9 114 501.2716496449746 1000.5287463567493 2 501.2721435427666 MULTI CID FTMS 0 0 0 6244 103091.8359375 0.5478033284776256 -2 0.0656604766845703 3 Unmodified _RLGSVNENL_ ENSG00000132199|ENST00000647584|ENOSF1;ENST00000583973.5_1_18:674307-686832:-|nuORF;nc|ENSG00000132199|Q7L5Y1-2|ENOSF1;nc|ENSG00000132199|Q7L5Y1-4|ENOSF1;nc|ENSG00000132199|Q7L5Y1-5|ENOSF1;nc|ENSG00000132199|Q7L5Y1-6|ENOSF1;nc|ENSG00000132199|Q7L5Y1-7|ENOSF1 34.93206674587334 0.1032771302489716 6 [R{I|L}]GSVNEN{I|L} 9 0 + 43.338 0.0 0.0 4.3315 4.3315 78.716 0.0 0.0 0.0 3.2568864632742844 29.10865574872074 3.2568864632742844 5.295248280194983 0 0.3252574989159953 0.0 0.3252574989159953 0.0 + + [R{I|L}]GSVNEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RK]NEN{I|L};[R{I|L}]GSVGGEN{I|L};[R{I|L}]GSVNEGG{I|L};[VS]{[QV]|[N{I|L}]|[RA]|[KV]}VNEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RK]GGEN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RK]NEGG{I|L};{[TV]|[{I|L}S]}{[NV]|[RG]}VNEN{I|L};[R{I|L}]GSVGGEGG{I|L};[VS]{[QV]|[N{I|L}]|[RA]|[KV]}VNEGG{I|L} 4.3315;3.8023;3.4112;3.4112;3.2352;2.8765;2.8765;2.7583;2.4952;2.3148 +;-;-;-;-;-;-;-;-;- + 576 1 1.684 94874.1 0.4699999988079071 1223 5022 6244 SUDHL4_400M_050219_2,6247 SUDHL4_400M_050219_2,6247,RLGSVNENL True True RLGSVNENL 30.888803 501.272143542767 794500.25 6244.0 nc|ENSG00000132199|Q7L5Y1-4|ENOSF1;;nc|ENSG00000132199|Q7L5Y1-7|ENOSF1;;nc|ENSG00000132199|Q7L5Y1-2|ENOSF1;;nc|ENSG00000132199|Q7L5Y1-6|ENOSF1;;ENSG00000132199|ENST00000647584|ENOSF1;;nc|ENSG00000132199|Q7L5Y1-5|ENOSF1;;ENST00000583973.5_1_18:674307-686832:-|nuORF 3.2600580851236978 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6248 30.903 800.0 26798.0 25 0 2522.1 -1 0 41 974.6377838892532 3894.5220296906127 4 974.8904296755792 MULTI CID FTMS 0 0 0 6244 80779.265625 1.0 0 0.0 4 6 {I|L} 1 -1 5.4846 0.0 0.0 0.14083 0.0 0.0 2612.960041462685 1165.453873195774 3778.413914658459 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.14083 - 2 + 1 1.684 26731.8 0.3600000143051147 1224 5022 6244 SUDHL4_400M_050219_2,6248 SUDHL4_400M_050219_2,6248, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6250 30.907 87.0 485530.0 25 0 45747.0 + 35265 SSFIGKVKS 9 68 476.77677470375 951.5389964743 2 476.7765991091728 MULTI CID FTMS 0 0 0 6249 248387.25 0.1505478778493398 4 -0.1498279571533203 1 Unmodified _SSFIGKVKS_ REV__ENST00000335500.8_1_17:42474164-42474308:-|nuORF 29.081581746732265 0.1611639662936252 6 {[CA]|SS}{M(Oxidation (M))|F}{I|L}[KS]V[KG] 9 -1 + 25.594 0.0 0.0 2.6898 2.6898 82.727 0.0 0.0 0.0 11.614999749340388 3.256886463274288 3.256886463274288 25.594399836060763 0 0.3252574989159953 0.0 0.6989700043360187 0.0 {[CA]|SS}{M(Oxidation (M))|F}{I|L}[KS]V[KG] 2.6898 - 40 + 1 1.684 38425.8 1.0 1225 5023 6249 SUDHL4_400M_050219_2,6250 SUDHL4_400M_050219_2,6250,SSFIGKVKS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6251 30.913 290.0 338620.0 25 0 121960.0 + 32037 RVITALVER 9 73 528.8297555540532 1055.6449581749064 2 528.8296996951103 MULTI CID FTMS 0 0 0 6249 212753.390625 0.815456743422146 1 -0.0150508880615234 2 Unmodified _RVITALVER_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 15.738622578938676 0.4106572216562794 6 R{M(Oxidation (M))|F}V{I|L} 4 7 29.17 0.0 0.0 2.7633 0.0 0.0 0.0 537.3150118463499 537.3150118463499 4.293220392716908 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 R{M(Oxidation (M))|F}V{I|L} 2.7633 - 57 + 1 1.684 81033.3 1.0 1226 5023 6249 SUDHL4_400M_050219_2,6251 SUDHL4_400M_050219_2,6251,RVITALVER False True RVITALVER 30.91319 528.82969969511 1457626.75 6249.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 6.1280544598897295 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6252 30.918 242.0 296510.0 25 0 31965.0 39730 VEKHLNAQL 9 106 351.20143685853947 1050.5824811758184 3 351.2013427615166 MULTI CID FTMS 0 0 0 6249 117311.09375 0.3763712424460413 -2 0.092386245727539 3 Unmodified _VEKHLNAQL_ ENSG00000163635|ENST00000674280|ATXN7;ENST00000474112.5_1_3:63898274-63982174:+|nuORF;ENST00000484668.1_1_3:63973932-63976536:+|nuORF;nc|ENSG00000163635|O15265-2|ATXN7;nc|ENSG00000163635|O15265-3|ATXN7 12.174745833636583 0.5071271664557081 6 {I|L}NAQ{I|L} 5 4 30.886 0.0 0.0 2.9398 0.0 0.0 493.2635670392594 0.0 493.2635670392594 0.0 16.90614065464281 0.0 0.0 0 0.242992819099939 0.0 0.0 0.9247425010840048 + {I|L}NAQ{I|L} 2.9398 + + 81 1 1.684 62653.4 1.0 1227 5023 6249 SUDHL4_400M_050219_2,6252 SUDHL4_400M_050219_2,6252,VEKHLNAQL False True KLHDINAQL 30.917703 351.201342761517 2834741.25 6249.0 nc|ENSG00000100280|Q10567-2|AP1B1;;nc|ENSG00000100280|Q10567-3|AP1B1;;nc|ENSG00000100280|Q10567-4|AP1B1;;ENSG00000100280|ENST00000357586|AP1B1 2.8600506583849588 3.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6254 30.934 800.0 128260.0 25 0 12102.0 + -1 LFDEKMYEN 9 98 602.7642621519177 1203.513971370635 2 602.7650024294853 MULTI CID FTMS 0 0 0 6253 98322.078125 0.7728744782883898 -2 0.0627822875976562 1 Oxidation (M) _LFDEKM(Oxidation (M))YEN_ REV__ENSG00000174238|ENST00000313486|PITPNA 11.640296217721598 0.521594087909532 6 {M(Oxidation (M))|F}{I|L}DKE{I|L}KCE 9 -1 42.649 0.0 0.0 3.5437 0.0 0.0 79.95613960992758 0.0 79.95613960992758 0.0 11.512232664209131 0.0 0.0 0 0.0 0.0 1.579689690656103 0.0 {M(Oxidation (M))|F}{I|L}DKE{I|L}KCE 3.5437 - 668 + 1 1.684 76060.4 0.4600000083446502 1228 5024 6253 SUDHL4_400M_050219_2,6254 SUDHL4_400M_050219_2,6254,LFDEKMYEN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6255 30.936 78.0 697660.0 25 0 60505.0 + -1 TAVTAHFMKK 10 88 575.3077318787435 1148.600910824287 2 575.3079101443291 MULTI CID FTMS 0 0 0 6253 392985.0625 1.0 0 0.0 2 Oxidation (M) _TAVTAHFM(Oxidation (M))KK_ REV__ENSG00000163565|ENST00000295809|IFI16;REV__ENST00000493884.5_1_1:158984458-159022017:+|nuORF;REV__nc|ENSG00000163565|Q16666-2|IFI16;REV__nc|ENSG00000163565|Q16666-3|IFI16;REV__nc|ENSG00000163565|Q16666-6|IFI16;REV__nc|ENSG00000163565|Q16666-8|IFI16 27.628801355627647 0.3479284626772844 6 [TA]VTAT[{I|L}P]T{M(Oxidation (M))|F} 10 -1 60.697 0.0 0.0 5.2844 0.0 0.0 0.0 143.08562697102448 143.08562697102448 44.41508427897838 0.0 0.0 0.0 0 1.411954370472159 1.0 1.8494850021680087 0.0 [TA]VTAT[{I|L}P]T{M(Oxidation (M))|F} 5.2844 - 963 1 1.684 45395.4 1.0 1229 5024 6253 SUDHL4_400M_050219_2,6255 SUDHL4_400M_050219_2,6255,TAVTAHFMKK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6256 30.94 231.0 258690.0 25 0 13737.0 + 39731 VEKHLNAQL 9 97 526.2984996902561 1050.582446447312 2 526.2989379763603 MULTI CID FTMS 0 0 0 6253 176803.046875 0.6647173085052414 -2 0.0627822875976562 3 Unmodified _VEKHLNAQL_ ENSG00000163635|ENST00000674280|ATXN7;ENST00000474112.5_1_3:63898274-63982174:+|nuORF;ENST00000484668.1_1_3:63973932-63976536:+|nuORF;nc|ENSG00000163635|O15265-2|ATXN7;nc|ENSG00000163635|O15265-3|ATXN7 30.7034409873982 0.1405282614900322 6 {NN|[MP]|[D{I|L}]|[EV]}HK{I|L}ANQ{I|L} 9 4 + 42.46 0.0 0.0 4.0416 4.0416 78.294 0.0 0.0 0.0 5.977139162689021 14.044023348612676 5.977139162689021 5.977139162689021 0 0.718765315847925 1.154901959985743 0.0 0.7614393726401688 {NN|[MP]|[D{I|L}]|[EV]}HK{I|L}ANQ{I|L};{[VA]|[{I|L}G]}A{[{M(Oxidation (M))|F}H]|[RQ]}PP{[CP]|[EA]}{I|L};[H{I|L}]KD{I|L}ANQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}HK{I|L}AN[AG]{I|L};[HD]{I|L}K{I|L}ANQ{I|L};[H{I|L}]DK{I|L}ANQ{I|L};[H{I|L}]KD{I|L}AN[AG]{I|L};[H{I|L}]K{M(Oxidation (M))|F}PP{[CP]|[EA]}{I|L};[Q{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}PP{[CP]|[EA]}{I|L};[HD]{I|L}K{I|L}AN[AG]{I|L} 4.0416;3.4727;3.4602;3.1651;2.9423;2.8384;2.5837;2.5812;2.2778;2.0658 -;-;-;-;-;-;-;-;-;- 317 1 1.684 49720.6 1.0 1230 5024 6253 SUDHL4_400M_050219_2,6256 SUDHL4_400M_050219_2,6256,VEKHLNAQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6257 30.951 642.0 215890.0 25 0 17125.0 + -1 ALDCSSLDCC 10 147 543.6988716772203 1085.3831904212404 2 543.6993286013603 MULTI CID FTMS 0 0 0 6253 99486.5 0.8813661145984029 -1 0.0150508880615234 4 Carbamidomethyl (C) _ALDC(Carbamidomethyl (C))SSLDCC_ REV__ENSG00000137261|ENST00000378214|KIAA0319;REV__nc|ENSG00000137261|Q5VV43-2|KIAA0319;REV__nc|ENSG00000137261|Q5VV43-3|KIAA0319;REV__nc|ENSG00000137261|Q5VV43-4|KIAA0319 3.944395688203298 0.708391353636983 6 [{I|L}A]D 3 -1 20.546 0.0 0.0 1.893 0.0 0.0 0.0 783.2120227789154 783.2120227789154 8.952424927286842 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]D 1.893 + + 251 1 1.684 107714.4 1.0 1231 5024 6253 SUDHL4_400M_050219_2,6257 SUDHL4_400M_050219_2,6257,ALDCSSLDCC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6259 30.969 800.0 96076.0 25 0 6834.2 + -1 FHNLNYWCQYF 11 70 796.3417790539611 1590.669005174722 2 796.3425781130791 MULTI CID FTMS 0 0 0 6258 63020.84375 0.2475417725137721 4 -0.1613388061523437 1 Carbamidomethyl (C) _FHNLNYWC(Carbamidomethyl (C))QYF_ REV__L1PREC2_dup7703|chr22:35184780-35188467:+|2.233589900920421|0.1698046790599514|3.72|46.0|122|1|anti-sense 2.9952420565917617 0.861016188266951 6 {M(Oxidation (M))|F}ANQQAED[MT]Q 11 -1 75.069 0.0 0.0 4.7193 0.0 0.0 309.13337955867456 0.0 309.13337955867456 0.0 66.9965611617364 0.0 0.0 0 0.8494850021680094 0.0 0.0 1.1861818737241734 {M(Oxidation (M))|F}ANQQAED[MT]Q 4.7193 - 719 + 1 1.684 58890.1 0.5600000023841858 1232 5025 6258 SUDHL4_400M_050219_2,6259 SUDHL4_400M_050219_2,6259,FHNLNYWCQYF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6260 30.975 296.0 222120.0 25 0 16570.0 -1 CSYTCAKK 8 110 480.717151966457 959.419750999714 2 480.7176391482353 MULTI CID FTMS 0 0 0 6258 187312.484375 0.674646362143084 -1 0.0337123870849609 2 Carbamidomethyl (C) _CSYTC(Carbamidomethyl (C))AKK_ ENSG00000010327|ENST00000321725|STAB1 11.640296217721598 0.738950129755968 6 [HT]GP{I|L}T 6 -1 42.203 0.0 0.0 4.3988 0.0 0.0 0.0 350.0829949784829 350.0829949784829 24.76789385964942 0.0 0.0 0.0 0 0.7742275032520141 0.619788758288394 0.8252574989159953 0.0 [HT]GP{I|L}T 4.3988 - 258 1 1.684 54642.0 1.0 1233 5025 6258 SUDHL4_400M_050219_2,6260 SUDHL4_400M_050219_2,6260,CSYTCAKK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6261 30.982 418.0 259920.0 25 0 25537.0 + 38855 TVIPNSHVY 9 119 515.2718567301536 1028.529160527107 2 515.2708007693291 MULTI CID FTMS 0 0 0 6258 161439.125 0.4664298486095546 -6 0.1923847198486328 3 Unmodified _TVIPNSHVY_ ENSG00000117133|ENST00000370654|RPF1 43.85829265575387 0.0542763391141878 6 {[TV]|[{I|L}S]}{I|L}PSN[HV]Y 9 2 + 52.258 0.0 0.0 5.0808 5.0808 78.222 0.0 0.0 0.0 32.705219175757065 3.8022006119560814 3.8022006119560814 2.5134875797167666 0 1.048455006504028 2.0 0.805462187404089 0.3807196863200844 {[TV]|[{I|L}S]}{I|L}PSN[HV]Y;{[TV]|[{I|L}S]}{I|L}[NS]P[HV]Y;{[TV]|[{I|L}S]}{I|L}P[NP][{M(Oxidation (M))|F}E]{I|L};{[TV]|[{I|L}S]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}S[KT]Y;{[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C))K][{M(Oxidation (M))|F}V]Y;{[TV]|[{I|L}S]}{I|L}[NS]{[RE]|[WV]}[NP];{[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C))K][TP][NP];{[TV]|[{I|L}S]}[WK]S[{M(Oxidation (M))|F}V]Y;[NP]SHV{I|L}YS{I|L};{[TV]|[{I|L}S]}[WK]S[TP][NP] 5.0808;4.8365;4.3752;4.1595;3.7188;3.5086;3.34;2.8587;1.8322;1.6968 -;-;-;-;-;-;-;-;-;- 356 + 1 1.684 85167.5 1.0 1234 5025 6258 SUDHL4_400M_050219_2,6261 SUDHL4_400M_050219_2,6261,TVIPNSHVY True True TVIPNSHVY 30.982021 515.270800769329 6608381.0 6258.0 ENSG00000117133|ENST00000370654|RPF1 5.186097939809163 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6262 30.996 800.0 151660.0 25 0 22844.0 + 42718 VVAPPGVVVSR 11 99 540.3323641047675 1078.650175276335 2 540.3329345583916 MULTI CID FTMS 0 0 0 6258 124051.9921875 0.8246055190308382 -2 0.0487632751464843 4 Unmodified _VVAPPGVVVSR_ ENSG00000145191|ENST00000648915|EIF2B5;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;ENST00000491144.5_1_3:183853173-183855624:+|nuORF 27.088373467376528 0.4561593585727911 6 VVAPPGVV[VS]R 11 0 + 63.224 0.0 0.0 5.8614 5.8614 92.929 0.0 0.0 0.0 52.51026800076343 1.497298249145338 1.497298249145338 63.22360551860708 0 1.0 1.6989700043360187 0.3494850021680094 0.0 + + VVAPPGVV[VS]R 5.8614 + + 93 + 1 1.684 100655.6 0.5600000023841858 1235 5025 6258 SUDHL4_400M_050219_2,6262 SUDHL4_400M_050219_2,6262,VVAPPGVVVSR False True VVAPPGVVVSR 30.995852 540.332934558392 941900.8125 6258.0 ENST00000491144.5_1_3:183853173-183855624:+|nuORF;;ENST00000481054.5_1_3:183853173-183856676:+|nuORF;;ENSG00000145191|ENST00000648915|EIF2B5 7.007544994354248 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6263 31.009 746.0 155740.0 25 0 17327.0 + 22915 LSDLTSVSL 9 106 467.7589144260872 933.5032759189744 2 467.7588989138603 MULTI CID FTMS 0 0 0 6258 122032.640625 0.5591063534876349 -8 0.2617549896240234 5 Unmodified _LSDLTSVSL_ nc|ENSG00000158793|Q86X76-3|NIT1 32.30548876998284 0.1201446275138228 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ERPVS{I|L} 8 5 + 60.455 0.0 0.0 6.4762 6.4762 92.207 0.0 0.0 0.0 5.55462187404089 34.25759390300961 5.55462187404089 14.841284356197235 0 1.5994850021680094 0.0 0.5866968715561641 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ERPVS{I|L};[VP][WH]PVS{I|L};[{M(Oxidation (M))|F}V][KQ]{[WN]|[YH]}{I|L};{[{M(Oxidation (M))|F}D]|MM}[RK]QQ{I|L} 6.4762;4.8863;1.737;1.2546 -;-;-;- 313 1 1.684 98942.3 1.0 1236 5025 6258 SUDHL4_400M_050219_2,6263 SUDHL4_400M_050219_2,6263,LSDLTSVSL True False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 6265 31.014 108.0 441000.0 25 0 77165.0 + 25841 NLDPAVHEV 9 68 497.25335097431554 992.4921490154312 2 497.2534973025322 MULTI CID FTMS 0 0 0 6264 413288.375 0.5287493982955572 2 -0.0871162414550781 1 Unmodified _NLDPAVHEV_ ENSG00000198522|ENST00000610189|GPN1;ENST00000461249.1_1_2:27852141-27855513:+|nuORF;ENST00000478484.5_1_2:27851925-27854072:+|nuORF;ENST00000503738.5_1_2:27851561-27855513:+|nuORF;nc|ENSG00000198522|Q9HCN4-4|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1 36.12702656103203 0.0967173616627612 6 {[QV]|[N{I|L}]|[RA]|[KV]}DPG{I|L} 6 5 49.697 0.0 0.0 5.0073 0.0 0.0 0.0 380.157712198194 380.157712198194 38.27738647295925 0.0 0.0 0.0 0 1.274227503252014 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}DPG{I|L} 5.0073 - 83 + 1 1.684 40247.7 1.0 1237 5026 6264 SUDHL4_400M_050219_2,6265 SUDHL4_400M_050219_2,6265,NLDPAVHEV True True NLDPAVHEV 31.013577 497.253497302532 8298962.0 6264.0 ENSG00000198522|ENST00000610189|GPN1;;ENST00000503738.5_1_2:27851561-27855513:+|nuORF;;ENST00000478484.5_1_2:27851925-27854072:+|nuORF;;nc|ENSG00000198522|Q9HCN4-4|GPN1;;ENST00000461249.1_1_2:27852141-27855513:+|nuORF;;nc|ENSG00000198522|Q9HCN4-5|GPN1 8.365124066670736 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6266 31.027 800.0 93378.0 25 0 11556.0 + 11284 GEVDVEQHTL 10 123 563.7723282224122 1125.5301035116242 2 563.7720214724541 MULTI CID FTMS 0 0 0 6264 80569.609375 0.1919124381857166 4 -0.1542568206787109 2 Unmodified _GEVDVEQHTL_ ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1 59.36838082759317 0.0382430275470746 6 {[DA]|[EG]}VDVEQ[HT]{I|L} 10 0 + 71.746 0.0 0.0 6.3744 6.3744 91.641 0.0 0.0 0.0 56.6585575868564 5.7671594274379885 5.7671594274379885 13.411964496339294 0 1.3494850021680094 1.6989700043360187 1.6549471895720984 0.4247425010840047 + + {[DA]|[EG]}VDVEQ[HT]{I|L};{[DA]|[EG]}VDVE[AG][HT]{I|L};{[DA]|[EG]}VDV{M(Oxidation (M))|F}[RH]AP;WVDV{M(Oxidation (M))|F}Q[HV]P;WVDV{M(Oxidation (M))|F}[HV]QP;WVDY[YR]QP;WVDV{M(Oxidation (M))|F}[HV]GAP;WVDY[YR]GAP;WVDV{M(Oxidation (M))|F}[AG][HV]P;WVDY[NP][HV]P 6.3744;5.1828;5.1036;4.8362;4.2558;4.2129;4.1448;4.0971;4.0181;3.9703 +;-;-;-;-;-;-;-;-;- + 602 + 1 1.684 62277.5 0.6299999952316284 1238 5026 6264 SUDHL4_400M_050219_2,6266 SUDHL4_400M_050219_2,6266,GEVDVEQHTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6267 31.037 575.0 217340.0 25 0 31859.0 + 19737 LGPPRLAPG 9 102 439.266509429665 876.51846592613 2 439.2667419314384 MULTI CID FTMS 0 0 0 6264 152057.53125 0.0458920656533387 111 -2.354257583618164 3 Unmodified _LGPPRLAPG_ REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF 16.942295170755138 0.3780752226737986 6 {[VA]|[{I|L}G]}PP[R{I|L}]PQ 8 -1 + 48.919 0.0 0.0 5.5811 5.5811 83.341 0.0 0.0 0.0 14.929155219028942 5.88271706842329 5.88271706842329 5.88271706842329 0 0.2302046884880938 1.6989700043360187 0.0 0.3252574989159953 {[VA]|[{I|L}G]}PP[R{I|L}]PQ;{[VA]|[{I|L}G]}PP[R{I|L}]QP;{[VA]|[{I|L}G]}V[HK]VPQ;{[VA]|[{I|L}G]}[HK]VVPQ;{[VA]|[{I|L}G]}V[HK]VQP;{[VA]|[{I|L}G]}PP[R{I|L}][AG]P;{[VA]|[{I|L}G]}[HK]VVQP;{[VA]|[{I|L}G]}V[HK]V[AG]P;{[VA]|[{I|L}G]}V[HK][NP]{I|L};{[VA]|[{I|L}G]}[HK]VV[AG]P 5.5811;4.91;4.5508;4.0968;3.8797;3.4822;3.4257;2.4519;2.183;1.9979 -;-;-;-;-;-;-;-;-;- 273 + 1 1.684 99774.8 1.0 1239 5026 6264 SUDHL4_400M_050219_2,6267 SUDHL4_400M_050219_2,6267,LGPPRLAPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6268 31.051 800.0 155550.0 25 0 22024.0 23848 LVHPVTEPKA 10 112 545.8177771677813 1089.6210014023625 2 545.8184081912041 MULTI CID FTMS 0 0 0 6264 85342.234375 0.569773153860991 -2 0.091064453125 4 Unmodified _LVHPVTEPKA_ ENSG00000214013|ENST00000318010|GANC 9.38312468134398 0.6832340498775793 6 KTT[{I|L}P][WP]K 8 7 35.095 0.0 0.0 3.2209 0.0 0.0 120.06084601808966 0.0 120.06084601808966 0.0 21.105897871151125 0.0 0.0 0 0.0 0.0 1.3494850021680094 0.2215141619232908 KTT[{I|L}P][WP]K 3.2209 - 406 + 1 1.684 101040.6 0.4799999892711639 1240 5026 6264 SUDHL4_400M_050219_2,6268 SUDHL4_400M_050219_2,6268,LVHPVTEPKA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6269 31.052 35.0 1118800.0 25 0 165350.0 -1 0 60 473.2590521412895 472.2517756746895 1 473.2589599490166 MULTI CID FTMS 0 0 0 6264 1690847.25 0.3786531517156821 4 -0.1542568206787109 5 6 V 1 -1 10.485 0.0 0.0 2.2201 0.0 0.0 355.1727255421684 0.0 355.1727255421684 0.0 10.48455006504028 0.0 0.0 0 0.0 0.0 0.0 0.0 V 2.2201 - 1 + 1 1.684 37210.0 1.0 1241 5026 6264 SUDHL4_400M_050219_2,6269 SUDHL4_400M_050219_2,6269, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6271 31.058 83.0 648170.0 25 0 106750.0 + -1 KCHHYHCRHS 10 70 711.3068376421643 1420.5991223511285 2 711.8011352419853 MULTI CID FTMS 0 0 0 6270 727750.875 0.0622179038076028 15 -0.3326244354248047 1 2 Carbamidomethyl (C) _KC(Carbamidomethyl (C))HHYHC(Carbamidomethyl (C))RHS_ REV__MER57-int_dup428|chr6:33132600-33134898:-|2.586491035679624|0.0776769780525371|5.06|48.0|82|1|anti-sense 3.5964929083625545 0.7100006075494749 6 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA 10 -1 71.191 0.0 0.0 5.0113 0.0 0.0 0.0 324.13196299677537 324.13196299677537 47.08797227962833 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 1.2302046884880935 {[QD]|[EN]|[WG]|[KD]|[RS]}AHEAQQDA 5.0113 - 1549 1 1.684 44817.8 1.0 1242 5027 6270 SUDHL4_400M_050219_2,6271 SUDHL4_400M_050219_2,6271,KCHHYHCRHS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6272 31.068 569.0 167000.0 25 0 20632.0 + 42645 VTVNDIDPV 9 112 486.25483819911295 970.495123465026 2 486.2546874880791 MULTI CID FTMS 0 0 0 6270 92568.4375 0.1673917583890554 168 -3.704214096069336 2 Unmodified _VTVNDIDPV_ REV__ENSG00000123384|ENST00000243077|LRP1 26.88365393820708 0.1891292719743517 6 [{I|L}T]G 3 -1 30.062 0.0 0.0 3.0976 0.0 0.0 0.0 696.3155329711384 696.3155329711384 17.29745883207972 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}T]G 3.0976 - 252 1 1.684 78989.8 1.0 1243 5027 6270 SUDHL4_400M_050219_2,6272 SUDHL4_400M_050219_2,6272,VTVNDIDPV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6273 31.082 800.0 105470.0 25 0 4596.3 + 44223 YLHDQNPDAAL 11 111 628.7982263543136 1255.581899775427 2 628.7986938357353 MULTI CID FTMS 0 0 0 6270 92272.96875 0.3972731404454971 -5 0.1975593566894531 3 Unmodified _YLHDQNPDAAL_ ENSG00000105669|ENST00000262812|COPE;ENST00000597026.5_1_19:19017767-19023834:-|nuORF;nc|ENSG00000105669|O14579-3|COPE 40.72490554402381 0.2012291192650359 6 [{I|L}V]DE{[CP]|[EA]}N[DP]AA{I|L} 12 5 + 65.35 0.0 0.0 5.2048 5.2048 81.167 0.0 0.0 0.0 20.027515650137104 31.392522010455792 20.027515650137104 4.771212547196626 0 2.0356668758921828 2.0 0.0 0.8494850021680094 [{I|L}V]DE{[CP]|[EA]}N[DP]AA{I|L};[{I|L}V]DE{[CP]|[EA]}NA[DP]A{I|L};[{I|L}V]DE[C(Carbamidomethyl (C))H][QT]AA{I|L};[{I|L}V]DE{[CP]|[EA]}N[WP]A{I|L};[{I|L}V]DE{[CP]|[EA]}YYAA{I|L};{NN|[MP]|[D{I|L}]|[EV]}EV{[CP]|[EA]}N[DP]AA{I|L};AA[RD]DQN[DP]AA{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}V{[CP]|[EA]}N[DP]AA{I|L};{[QN]|[E{I|L}]|[KN]}DV{[CP]|[EA]}N[DP]AA{I|L};{NN|[MP]|[D{I|L}]|[EV]}EV{[CP]|[EA]}NA[DP]A{I|L} 5.2048;4.8248;4.4415;4.3399;3.7233;3.5764;3.5102;3.46;3.1964;3.1964 -;-;-;-;-;-;-;-;-;- 1171 1 1.684 66881.0 0.4900000095367431 1244 5027 6270 SUDHL4_400M_050219_2,6273 SUDHL4_400M_050219_2,6273,YLHDQNPDAAL False True YLHDQNPDAAL 31.082016 628.798693835735 1321379.75 6270.0 ENST00000597026.5_1_19:19017767-19023834:-|nuORF;;nc|ENSG00000105669|O14579-3|COPE;;ENSG00000105669|ENST00000262812|COPE 7.337490240732829 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6274 31.096 800.0 55766.0 25 0 16768.0 -1 0 40 1077.7651317134794 3230.2735657406383 3 1078.101123034954 MULTI CID FTMS 0 0 0 6270 114239.75 0.4504516349158694 -3 0.1347770690917968 4 6 E 1 -1 3.9794 0.0 0.0 0.12319 0.0 0.0 2574.0455516798947 524.1610811822874 3098.2066328621822 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.12319 - 7 + 1 1.684 51043.9 0.4199999868869781 1245 5027 6270 SUDHL4_400M_050219_2,6274 SUDHL4_400M_050219_2,6274, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6276 31.102 161.0 342360.0 25 0 41353.0 -1 CPNARCQFAFY 11 69 717.3073394128171 1432.600125892434 2 717.3076049685478 MULTI CID FTMS 0 0 0 6275 337530.21875 0.5565162788593551 2 -0.0671405792236328 1 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))PNARC(Carbamidomethyl (C))QFAFY_ ENSG00000129353|ENST00000335757|SLC44A2;ENST00000589561.5_1_19:10746968-10754058:+|nuORF;nc|ENSG00000129353|Q8IWA5-2|SLC44A2;nc|ENSG00000129353|Q8IWA5-3|SLC44A2 13.90604991867851 0.7458848613461305 6 [AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 64.838 0.0 0.0 4.5259 4.5259 79.8 0.0 0.0 0.0 1.0460553079698087 47.84797112838049 1.0460553079698087 6.073030467403342 0 0.8935078169319297 1.2218487496163564 0.3252574989159953 0.8494850021680094 [AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQNA{M(Oxidation (M))|F}Y;[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F}Y;[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F}Y;[AG]G{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F}Y;[AG][DP][HD]AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{[YD]|[{M(Oxidation (M))|F}M]}EAQQGGA{M(Oxidation (M))|F}Y 4.5259;4.102;3.8926;3.8926;3.8926;3.6373;3.4669;3.4669;3.4669 -;-;-;-;-;-;-;-;- 217 1 1.684 45611.0 1.0 1246 5028 6275 SUDHL4_400M_050219_2,6276 SUDHL4_400M_050219_2,6276,CPNARCQFAFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6277 31.106 205.0 378470.0 25 0 36439.0 + 11637 GLAPKPVQV 9 97 454.7818650361968 907.5491771391936 2 454.7816650271416 MULTI CID FTMS 0 0 0 6275 315796.0 0.5456420543649002 -6 0.2409629821777343 2 Unmodified _GLAPKPVQV_ ENSG00000160796|ENST00000450053|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 60.38955033654506 0.025866396858536 6 {[VA]|[{I|L}G]}GPKP{I|L}QV 9 2 + 47.289 0.0 0.0 5.2107 5.2107 86.69 0.0 0.0 0.0 9.488474775526171 7.1919646325935815 7.1919646325935815 9.488474775526171 0 0.5484550065040281 2.0 0.0 0.2887254899964357 {[VA]|[{I|L}G]}GPKP{I|L}QV;[VP]QKP{I|L}QV;[Q{I|L}]PK[VP]QV;[VP][AG]KP{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}PKP{I|L}QV;[VP][KP]AG{I|L}QV;[VP][KP]Q{I|L}QV;[Q{I|L}]PK[VP][AG]V;[PA][VG]KP{I|L}QV;[PA]K[VP]G{I|L}QV 5.2107;4.1652;3.3797;3.1446;2.6248;2.5404;2.49;1.6374;1.4501;1.0903 -;-;-;-;-;-;-;-;-;- 467 1 1.684 67346.2 1.0 1247 5028 6275 SUDHL4_400M_050219_2,6277 SUDHL4_400M_050219_2,6277,GLAPKPVQV True True GLAPKPVQV 31.10551 454.781665027142 2684117.75 6275.0 nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2;;ENSG00000160796|ENST00000450053|NBEAL2;;nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2 7.284182866414388 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6278 31.113 406.0 189710.0 25 0 11516.0 + 17062 KLAPPSSTL 9 105 457.2706135804485 912.5266742276972 2 457.2704955935478 MULTI CID FTMS 0 0 0 6275 215995.515625 1.0 0 0.0 3 Unmodified _KLAPPSSTL_ ENSG00000120071|ENST00000432791|KANSL1 56.17704186161178 0.0281986971544335 6 [{I|L}A]KP[PS]S[{I|L}T] 9 2 + 34.763 0.0 0.0 3.8095 3.8095 82.848 0.0 0.0 0.0 9.669169327517723 8.837523893847749 8.837523893847749 11.249387366083 0 1.2887254899964358 1.3010299956639813 0.8494850021680094 0.25 [{I|L}A]KP[PS]S[{I|L}T];[K{I|L}]AP[PS]S[{I|L}T];[PS]PA[K{I|L}]S[{I|L}T];[Y{I|L}]Y[K{I|L}][{I|L}T];{[HG]|PP}SA[K{I|L}]S[{I|L}T] 3.8095;2.5767;0.74582;0.65388;0.5027 -;+;-;-;- + 233 1 1.684 63322.7 1.0 1248 5028 6275 SUDHL4_400M_050219_2,6278 SUDHL4_400M_050219_2,6278,KLAPPSSTL True True KLAPPSSTL 31.112752 457.270495593548 1083929.75 6275.0 ENSG00000120071|ENST00000432791|KANSL1 5.8766663869222 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6280 31.126 508.0 201720.0 25 0 16242.0 2501 ARELQLLY 8 123 503.2888045529765 0 503.2897216677666 PEAK CID FTMS 0 0 0 6279 80868.4453125 0.4790253469004011 -2 0.0602741241455078 1 Unmodified _ARELQLLY_ ENSG00000142700|ENST00000404795|DMRTA2 36.04419817259434 0.1760516939127867 6 Q 1 7 13.979 0.0 0.0 1.3916 0.0 0.0 294.1563072878084 579.3241060846311 873.4804133724394 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 + Q 1.3916 + + 31 + 1 1.684 82678.7 1.0 1249 5029 6279 SUDHL4_400M_050219_2,6280 SUDHL4_400M_050219_2,6280,ARELQLLY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6281 31.135 556.0 180800.0 25 0 23418.0 + -1 VTIHPSSSL 9 111 470.68588524655513 939.3572175599104 2 470.6853210330009 MULTI CID FTMS 0 0 0 6279 103512.8359375 0.7019301320713155 -7 0.2578334808349609 2 2 Oxidation (M) _AM(Oxidation (M))M(Oxidation (M))HGGTGF_ nc|ENSG00000162419|Q9Y692|GMEB1;ENSG00000162419|ENST00000373816|GMEB1 19.438996006549623 0.310492472477042 6 G{M(Oxidation (M))|F}[DN]TG{M(Oxidation (M))|F} 7 -1 33.716 0.0 0.0 3.5893 0.0 0.0 183.0869459225898 0.0 183.0869459225898 0.0 18.767507096020992 0.0 0.0 0 0.5 0.0 0.0 0.0 G{M(Oxidation (M))|F}[DN]TG{M(Oxidation (M))|F} 3.5893 - 192 + 1 1.684 83562.7 1.0 1250 5029 6279 SUDHL4_400M_050219_2,6281 SUDHL4_400M_050219_2,6281,AMMHGGTGF False False VTIHPSSSL 31.135331 470.685321033001 295956.6875 6279.0 nc|ENSG00000162419|Q9Y692|GMEB1;;ENSG00000162419|ENST00000373816|GMEB1 1.5896341403325398 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6282 31.149 800.0 162840.0 25 0 10093.0 -1 DWERMPRWYF 10 99 751.3387605935197 1500.6629682538394 2 751.3406860232353 MULTI CID FTMS 0 0 0 6279 98045.390625 0.5237234454630382 -8 0.3024883270263672 3 Oxidation (M) _DWERM(Oxidation (M))PRWYF_ ENSG00000052802|ENST00000261507|MSMO1 6.2057823575117 0.6979311171683138 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 82.507 0.0 0.0 5.498 5.498 85.497 0.0 0.0 0.0 17.341284356197235 10.62977812912628 10.62977812912628 9.098233696509126 0 1.0924778212679485 2.0 0.6694451763165201 0.805462187404089 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEAQQNA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEAQ[AG]NA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEA[AG]QNA{M(Oxidation (M))|F}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RDEAQQGGA{M(Oxidation (M))|F}Y;[EP]T[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;[TP]{M(Oxidation (M))|F}WEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[QA]EAQQNA{M(Oxidation (M))|F}Y;[EP]T[W{M(Oxidation (M))|F}]AQQGGA{M(Oxidation (M))|F}Y;[EP]T[W{M(Oxidation (M))|F}]AQ[AG]NA{M(Oxidation (M))|F}Y;[EP]T[W{M(Oxidation (M))|F}]A[AG]QNA{M(Oxidation (M))|F}Y 5.498;4.8917;4.8917;4.8917;4.3424;4.3198;4.0741;3.7362;3.7362;3.7362 -;-;-;-;-;-;-;-;-;- 1931 1 1.684 92607.1 0.4699999988079071 1251 5029 6279 SUDHL4_400M_050219_2,6282 SUDHL4_400M_050219_2,6282,DWERMPRWYF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6283 31.163 800.0 126440.0 25 0 6680.8 + 17103 KLFHEVVQA 9 138 535.8034958651548 1069.5924387971097 2 535.8035156130791 MULTI CID FTMS 0 0 0 6279 94668.2265625 0.8399163045696313 -8 0.3024883270263672 4 Unmodified _KLFHEVVQA_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000487214.1_1_1:889839-894659:-|nuORF 49.52724829834842 0.0414064571532091 6 {[YC]|[HE]}{M(Oxidation (M))|F}{I|L}KVVQA 9 4 + 74.112 0.0 0.0 6.929 6.929 88.521 0.0 0.0 0.0 7.619582244480625 16.478174818886373 7.619582244480625 7.539237471316298 0 0.8829131673969606 0.8860566476931632 0.9947026752325154 0.7302046884880937 {[YC]|[HE]}{M(Oxidation (M))|F}{I|L}KVVQA;{[YC]|[HE]}{M(Oxidation (M))|F}V{I|L}KVQA;{NN|[MP]|[D{I|L}]|[EV]}H{M(Oxidation (M))|F}{I|L}KVQA;{[{M(Oxidation (M))|F}H]|[RQ]}E{I|L}KVVQA;{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}KVV[AG]A;{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}VKVQA;{[YC]|[HE]}V{M(Oxidation (M))|F}{I|L}KVQA;{[{M(Oxidation (M))|F}H]|[RQ]}EV{I|L}KVQA;{[YC]|[HE]}{M(Oxidation (M))|F}V{I|L}KV[AG]A;{NN|[MP]|[D{I|L}]|[EV]}H{M(Oxidation (M))|F}{I|L}KV[AG]A 6.929;6.2242;6.2166;6.1632;6.0681;6.0167;5.8521;5.4583;5.3633;5.3557 -;-;-;-;-;-;-;-;-;- 1062 1 1.684 86390.5 0.4900000095367431 1252 5029 6279 SUDHL4_400M_050219_2,6283 SUDHL4_400M_050219_2,6283,KLFHEVVQA True True KLFHEVVQA 31.16301 535.803515613079 593088.125 6279.0 ENSG00000188976|ENST00000327044|NOC2L;;ENST00000487214.1_1_1:889839-894659:-|nuORF 4.681350668271382 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6286 31.172 52.0 989930.0 25 0 155880.0 + 18582 LADDSVRSL 9 66 488.2585743762348 974.5025958192696 2 488.2583495974541 MULTI CID FTMS 0 0 0 6285 767334.25 0.5872888783353901 -4 0.1146049499511718 1 Unmodified _LADDSVRSL_ ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL 22.65808497894818 0.2428932432760099 6 {I|L}ADDSVR{[TV]|[{I|L}S]} 9 0 + 72.33 0.0 0.0 7.4222 7.4222 97.193 0.0 0.0 0.0 65.33986249165785 4.762036441594191 4.762036441594191 72.32956253501804 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}ADDSVR{[TV]|[{I|L}S]} 7.4222 + + 55 + 1 1.684 46581.0 1.0 1253 5031 6285 SUDHL4_400M_050219_2,6286 SUDHL4_400M_050219_2,6286,LADDSVRSL False True LADDSVRSL 31.171868 488.258349597454 5180975.5 6285.0 ENSG00000138078|ENST00000409411|PREPL;;nc|ENSG00000138078|Q4J6C6|PREPL;;nc|ENSG00000138078|Q4J6C6-2|PREPL 6.384546120961507 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6287 31.176 225.0 186350.0 25 0 27081.0 + 13757 HSALSLSSI 9 67 457.7513206179867 913.4880883027736 2 457.7509033083916 MULTI CID FTMS 0 0 0 6285 145219.34375 0.6205550025215368 -6 0.2156696319580078 2 Unmodified _HSALSLSSI_ REV__ENSG00000153292|ENST00000371253|ADGRF1 26.88365393820708 0.1891292719743517 6 {[TV]|[{I|L}S]}[HA]S{I|L}{[WT]|[RM]} 8 -1 + 23.011 0.0 0.0 2.519 2.519 74.006 0.0 0.0 0.0 10.2463824074127 -8.665827977365627 -8.665827977365627 4.771212547196615 0 0.0 2.0 0.2887254899964357 0.0 {[TV]|[{I|L}S]}[HA]S{I|L}{[WT]|[RM]};{[TV]|[{I|L}S]}[HT]G{I|L}{[WT]|[RM]} 2.519;1.9967 -;- 104 1 1.684 37905.0 1.0 1254 5031 6285 SUDHL4_400M_050219_2,6287 SUDHL4_400M_050219_2,6287,HSALSLSSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6288 31.186 529.0 115720.0 25 0 15669.0 + 34446 SLYEENNKL 9 87 555.2776807771708 1108.5408086211414 2 555.2776977419853 MULTI CID FTMS 0 0 0 6285 102491.1875 1.0 0 0.0 3 Unmodified _SLYEENNKL_ ENSG00000135968|ENST00000309863|GCC2 49.93300154707207 0.0405168250806675 6 {[TV]|[{I|L}S]}YEE 5 4 48.645 0.0 0.0 4.3882 0.0 0.0 0.0 484.2494600885376 484.2494600885376 36.42642683904553 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.6694451763165201 0.0 + {[TV]|[{I|L}S]}YEE 4.3882 + + 262 + 1 1.684 55176.1 1.0 1255 5031 6285 SUDHL4_400M_050219_2,6288 SUDHL4_400M_050219_2,6288,SLYEENNKL True True SLYEENNKL 31.185747 555.277697741985 525392.9375 6285.0 ENSG00000135968|ENST00000309863|GCC2 4.257205486297607 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6292 31.203 372.0 191360.0 25 0 18362.0 + 11908 GLWRTTPEAHA 11 93 413.5473384825374 1237.6201860478122 3 413.5469238162041 MULTI CID FTMS 0 0 0 6291 139566.609375 0.5142045693318128 -6 0.0978260040283203 1 Unmodified _GLWRTTPEAHA_ ENSG00000104635|ENST00000381237|SLC39A14;nc|ENSG00000104635|Q15043-2|SLC39A14;nc|ENSG00000104635|Q15043-3|SLC39A14 26.268140514670165 0.4754186812857754 6 {[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AH[Q{I|L}] 11 7 + 33.504 0.0 0.0 2.7072 2.7072 74.91 0.0 0.0 0.0 4.283895199066564 19.53257512541424 4.283895199066564 5.37070774309602 0 0.5 2.0 0.3054621874040891 0.0 {[VA]|[{I|L}G]}{[QN]|[E{I|L}]|[KN]}N{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AH[Q{I|L}];{[VA]|[{I|L}G]}[WR]EEAH[Q{I|L}];[WR]{[VA]|[{I|L}G]}EEAH[Q{I|L}];{[DS]|[MA]|[CV]|TT}[WR][EP]AH[Q{I|L}] 2.7072;2.2732;0.70051;0.19021 -;-;-;- 273 1 1.684 62075.0 1.0 1256 5034 6291 SUDHL4_400M_050219_2,6292 SUDHL4_400M_050219_2,6292,GLWRTTPEAHA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6293 31.217 800.0 111680.0 25 0 13465.0 + 20937 LNEISEETTIQ 11 105 638.8174921542727 1275.620431375345 2 638.8187133669853 MULTI CID FTMS 0 0 0 6291 102138.2734375 0.3066272746854477 -8 0.1849422454833984 2 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 53.40400417844725 0.0987786977674846 6 {[QV]|[N{I|L}]|[RA]|[KV]}AD[R{M(Oxidation (M))|F}]WN{I|L}Q 10 7 + 80.201 0.0 0.0 6.2872 6.2872 80.173 0.0 0.0 0.0 25.056584229283843 42.7536691925237 25.056584229283843 1.2057393120584976 0 2.2302046884880937 1.3979400086720375 0.0 1.055462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}AD[R{M(Oxidation (M))|F}]WN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}AD[R{M(Oxidation (M))|F}]EGN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}AD[DG]{[QV]|[N{I|L}]|[RA]|[KV]}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}AD[KP]{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}AD[DG]{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}AD[R{M(Oxidation (M))|F}]WGG{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}AD[R{M(Oxidation (M))|F}]EGGG{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}AD[R{M(Oxidation (M))|F}]W{I|L}NQ;{[QV]|[N{I|L}]|[RA]|[KV]}AD[R{M(Oxidation (M))|F}]EG{I|L}NQ;{[QV]|[N{I|L}]|[RA]|[KV]}AD[R{M(Oxidation (M))|F}]W{I|L}GGQ 6.2872;6.1927;6.1251;5.7047;5.6068;5.5688;5.4771;5.0892;4.9947;4.3708 -;-;-;-;-;-;-;-;-;- 901 1 1.684 75401.8 0.4799999892711639 1257 5034 6291 SUDHL4_400M_050219_2,6293 SUDHL4_400M_050219_2,6293,LNEISEETTIQ True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6296 31.226 148.0 386300.0 25 0 42837.0 33994 SLINSRDQP 9 89 515.2718567301536 1028.529160527107 2 515.2718994021416 MULTI CID FTMS 0 0 0 6295 257851.421875 0.7449842141359144 5 -0.1246871948242187 1 Unmodified _SLINSRDQP_ ENSG00000091009|ENST00000265271|RBM27 20.41453444215458 0.284085796332423 6 {[TV]|[{I|L}S]}{I|L}PC 5 6 41.427 0.0 0.0 4.0278 0.0 0.0 0.0 512.2322481744749 512.2322481744749 25.22878745280337 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}{I|L}PC 4.0278 - 161 + 1 1.684 49684.7 1.0 1258 5036 6295 SUDHL4_400M_050219_2,6296 SUDHL4_400M_050219_2,6296,SLINSRDQP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6297 31.229 127.0 416220.0 25 0 33544.0 -1 0 88 490.2857422075471 489.2784657409471 1 490.2837097048759 MULTI CID FTMS 0 0 0 6295 295130.5625 0.0691133350685986 14 -0.4269351959228515 2 6 [R{I|L}]CV 4 -1 [R{I|L}]C + + 10.278 6.2321 1.6744 2.1006 2.1006 50.452 0.0 0.0 0.0 0.0 -2.2405330906888388 -2.2405330906888388 0.0 0 0.0 0.0 0.0 0.0 [R{I|L}]CV 2.1006 - 11 + 1 1.684 45010.8 1.0 1259 5036 6295 SUDHL4_400M_050219_2,6297 SUDHL4_400M_050219_2,6297, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6300 31.249 800.0 88636.0 25 0 5731.3 44202 YLFYCKNCRFY 11 71 760.3437219463395 1518.672890959479 2 760.8456909060478 MULTI CID FTMS 0 0 0 6299 52700.80859375 0.3992552136582772 -3 0.0160560607910156 1 Unmodified _YLFYCKNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 6.2057823575117 0.8458686499021061 6 {[QN]|[E{I|L}]|[KN]}A[HV]EAQQNA{M(Oxidation (M))|F}Y 13 10 + 70.42 0.0 0.0 4.637 4.637 82.281 0.0 0.0 0.0 3.287372577089201 54.9356571997819 3.287372577089201 9.07245946763102 0 0.8182503180159344 0.0 0.0 1.274227503252014 {[QN]|[E{I|L}]|[KN]}A[HV]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[HV]EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[WS]|[C(Carbamidomethyl (C)){I|L}]}YQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[ES]|[DT]|[{I|L}C]}GYQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[WT]|[RM]}GYQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}{[WT]|[RM]}GYQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[WS]|[C(Carbamidomethyl (C)){I|L}]}YQ[AG]NA{M(Oxidation (M))|F}Y 4.637;4.0396;4.0396;4.0396;3.8854;3.8625;3.7466;3.6234;3.2863;3.2863 -;-;-;-;-;-;-;-;-;- 1193 1 1.684 55146.6 0.4600000083446502 1260 5038 6299 SUDHL4_400M_050219_2,6300 SUDHL4_400M_050219_2,6300,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6301 31.263 800.0 41495.0 25 0 3395.5 -1 0 35 1191.4757665514744 3571.405470254624 3 1191.808764636517 MULTI CID FTMS 0 0 0 6299 80287.03125 0.8518663365770337 -3 0.0160560607910156 2 6 [WY]P 3 -1 4.437 0.0 0.0 0.12424 0.0 0.0 0.0 3122.1811814700377 3122.1811814700377 4.436974992327125 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [WY]P 0.12424 - 5 1 1.684 30337.5 0.3199999928474426 1261 5038 6299 SUDHL4_400M_050219_2,6301 SUDHL4_400M_050219_2,6301, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6303 31.276 603.0 207590.0 25 0 13686.0 19550 LFQMPVSL 8 123 467.7589144260872 933.5032759189744 2 467.7589294314384 MULTI CID FTMS 0 0 0 6302 149245.953125 0.6837872244437081 6 -0.1881256103515625 1 Unmodified _LFQMPVSL_ ENSG00000063169|ENST00000594866|BICRA;nc|ENSG00000063169|Q9NZM4-2|BICRA 46.020951573049366 0.1579632664462935 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ERPVS{I|L} 8 3 + 60.665 0.0 0.0 6.4986 6.4986 90.882 0.0 0.0 0.0 9.729881656167125 9.729881656167125 9.729881656167125 9.729881656167125 0 1.5044321917401078 0.7958800173440752 0.5796896906561032 0.2302046884880938 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}ERPVS{I|L};{[SA]|[TG]}KKRT{M(Oxidation (M))|F}P;[VP][WH]PVS{I|L};{[SA]|[TG]}KKREC{I|L};{[SA]|[TG]}[KT][RK]{M(Oxidation (M))|F}P;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E[VS][RP]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E[VS][R{I|L}]P;{I|L}{I|L}{[ET]|[MV]}C(Carbamidomethyl (C))VS{I|L};{I|L}{I|L}{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}P{I|L};[{M(Oxidation (M))|F}V][{I|L}P]C(Carbamidomethyl (C))VS{I|L} 6.4986;5.4563;4.0762;3.9074;3.0412;2.534;2.0408;1.9831;1.7602;1.2875 -;-;-;-;-;-;-;-;-;- 731 1 1.684 96834.3 1.0 1262 5039 6302 SUDHL4_400M_050219_2,6303 SUDHL4_400M_050219_2,6303,LFQMPVSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6304 31.29 800.0 114810.0 25 0 13101.0 + 11909 GLWRTTPEAHA 11 88 619.8169845714802 1237.6194162097604 2 619.8178588747978 MULTI CID FTMS 0 0 0 6302 94247.0859375 1.0 0 0.0 2 Unmodified _GLWRTTPEAHA_ ENSG00000104635|ENST00000381237|SLC39A14;nc|ENSG00000104635|Q15043-2|SLC39A14;nc|ENSG00000104635|Q15043-3|SLC39A14 21.59015148037692 0.5852593066373742 6 AHA 3 8 36.198 0.0 0.0 2.9248 0.0 0.0 940.4753994243102 0.0 940.4753994243102 0.0 25.22878745280337 0.0 0.0 0 1.0 0.0 0.0 0.0 + AHA 2.9248 + + 45 1 1.684 72675.8 0.4799999892711639 1263 5039 6302 SUDHL4_400M_050219_2,6304 SUDHL4_400M_050219_2,6304,GLWRTTPEAHA False True GLWRTTPEAHA 31.289982 619.817858874798 2115415.75 6302.0 ENSG00000104635|ENST00000381237|SLC39A14;;nc|ENSG00000104635|Q15043-3|SLC39A14;;nc|ENSG00000104635|Q15043-2|SLC39A14 6.694720109303792 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6305 31.304 800.0 196880.0 25 0 14024.0 + -1 GAVGSVTAM 9 104 808.3587048986387 1614.7028568640774 2 808.3553344607353 MULTI CID FTMS 0 0 0 6302 86772.328125 0.7081313801655137 -1 0.030252456665039 3 Carbamidomethyl (C),Oxidation (M) _C(Carbamidomethyl (C))WNYRWRWAAM(Oxidation (M))_ ENSG00000100372|ENST00000435456|SLC25A17 1.4819007175156935 0.86815623132643 6 {M(Oxidation (M))|F}ANQQAE[HA]YQ 11 -1 74.475 0.0 0.0 4.6123 0.0 0.0 309.1343698125596 0.0 309.1343698125596 0.0 31.556556603278658 0.0 0.0 0 0.3252574989159953 0.0 0.2742275032520141 1.8539171939081167 {M(Oxidation (M))|F}ANQQAE[HA]YQ 4.6123 - 5393 + 1 1.684 108564.6 0.4199999868869781 1264 5039 6302 SUDHL4_400M_050219_2,6305 SUDHL4_400M_050219_2,6305,CWNYRWRWAAM False False GAVGSVTAM 31.30384 808.355334460735 294500.25 6302.0 ENSG00000100372|ENST00000435456|SLC25A17 2.973995084563891 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6307 31.317 555.0 165940.0 25 0 24856.0 + 19738 LGPPRLAPG 9 90 439.266509429665 876.51846592613 2 439.2668029665947 MULTI CID FTMS 0 0 0 6306 98097.7578125 0.0296066147133148 125 -2.595975875854492 1 Unmodified _LGPPRLAPG_ REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF 16.942295170755138 0.3780752226737986 6 {[VA]|[{I|L}G]}PP[R{I|L}][QP] 8 -1 + 39.155 0.0 0.0 4.4672 4.4672 86.576 0.0 0.0 0.0 27.73547920666468 0.4575749056067479 0.4575749056067479 21.76091259055681 0 0.25 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}PP[R{I|L}][QP];{[VA]|[{I|L}G]}[HK]VV[QP];{[VA]|[{I|L}G]}[HK][KT]{[HG]|PP} 4.4672;1.9845;1.4402 -;-;- 65 + 1 1.684 76442.5 1.0 1265 5040 6306 SUDHL4_400M_050219_2,6307 SUDHL4_400M_050219_2,6307,LGPPRLAPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6308 31.319 53.0 1107100.0 25 0 59718.0 + 28109 PPLRTPPLS 9 84 489.2923100061832 976.5700670791664 2 489.2922241091728 MULTI CID FTMS 0 0 0 6306 986621.5 0.8138532691487166 -2 0.0710201263427734 2 Unmodified _PPLRTPPLS_ REV__ENST00000266085.6_1_22:33256171-33256252:+|nuORF 20.453626601364224 0.2830276176381075 6 [R{I|L}]PPP[TP]{[TV]|[{I|L}S]} 9 -1 + 36.996 0.0 0.0 3.7884 3.7884 84.425 0.0 0.0 0.0 9.661130294909276 19.091218246911417 9.661130294909276 19.84379323607137 0 0.6643943297944485 1.0 0.5 0.0 [R{I|L}]PPP[TP]{[TV]|[{I|L}S]};[R{I|L}][YK][TP]{[TV]|[{I|L}S]} 3.7884;1.7564 -;- 62 1 1.684 52412.4 1.0 1266 5040 6306 SUDHL4_400M_050219_2,6308 SUDHL4_400M_050219_2,6308,PPLRTPPLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6309 31.328 507.0 170720.0 25 0 14021.0 + 31199 RLQEDPPVGV 10 106 555.3005560921989 1108.5865592511975 2 555.3030883669853 MULTI CID FTMS 0 0 0 6306 98496.7890625 0.4432499252378098 -2 0.0710201263427734 3 Unmodified _RLQEDPPVGV_ ENSG00000119048|ENST00000265339|UBE2B;ENST00000511807.1_1_5:133707262-133710155:+|nuORF 36.506200033944 0.1944608063770638 6 [H{I|L}]{I|L}YDP[VP]GV 10 3 + 63.873 0.0 0.0 5.7617 5.7617 85.184 0.0 0.0 0.0 7.573507992066695 16.53212513775344 7.573507992066695 7.573507992066695 0 2.017220322351953 1.5228787452803376 0.4247425010840047 0.0 [H{I|L}]{I|L}YDP[VP]GV;[VP]P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}SP[VP]GV;[H{I|L}]{I|L}YD[RH]GV;[VP]PG{[CT]|[{M(Oxidation (M))|F}G]}SP[VP]GV;[VP]P{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}S[RH]GV;[VP]PG[YQ]P[VP]GV;[VP]PG{[CT]|[{M(Oxidation (M))|F}G]}S[RH]GV;[VP]PG[YQ][RH]GV 5.7617;5.0785;4.7215;4.4934;4.0343;3.8688;3.4459;2.8246 -;-;-;-;-;-;-;- 294 1 1.684 70662.4 1.0 1267 5040 6306 SUDHL4_400M_050219_2,6309 SUDHL4_400M_050219_2,6309,RLQEDPPVGV False True RLQEDPPVGV 31.327753 555.303088366985 2534024.5 6306.0 ENST00000511807.1_1_5:133707262-133710155:+|nuORF;;ENSG00000119048|ENST00000265339|UBE2B 7.181228478749593 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6310 31.332 207.0 307960.0 25 0 33609.0 -1 0 86 416.249078011754 415.241801545154 1 416.2489807009697 MULTI CID FTMS 0 0 0 6306 223640.5625 0.0950300611910639 15 -0.4936161041259765 4 6 {I|L} 1 -1 2.4743 0.0 0.0 0.59586 0.0 0.0 193.09371302151965 106.04142175845936 299.135134779979 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.59586 - 7 + 1 1.684 55944.5 1.0 1268 5040 6306 SUDHL4_400M_050219_2,6310 SUDHL4_400M_050219_2,6310, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6311 31.346 800.0 128140.0 25 0 8298.8 + -1 SMYGVDLHKA 10 106 568.7734988303822 1135.5324447275643 2 568.7740966677666 MULTI CID FTMS 0 0 0 6306 117413.2421875 0.8969777267576311 -1 0.0407676696777343 5 Oxidation (M) _SM(Oxidation (M))YGVDLHKA_ nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-2|EPB41;ENSG00000159023|ENST00000343067|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-7|EPB41 30.7034409873982 0.2788461460996952 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YGVD{I|L}HAK 10 -1 + 47.275 0.0 0.0 4.1632 4.1632 76.271 0.0 0.0 0.0 27.91625492833109 11.818048224298074 11.818048224298074 3.125918950875501 0 1.086696871556164 0.0 0.0 0.3737125054200235 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YGVD{I|L}HAK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YRD{I|L}HAK;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[W{M(Oxidation (M))|F}]T{I|L}HAK;[HK]{I|L}{[CT]|[{M(Oxidation (M))|F}G]}VGY{[ES]|[DT]|[{I|L}C]};[H{I|L}]K{[CT]|[{M(Oxidation (M))|F}G]}VGY{[ES]|[DT]|[{I|L}C]};[VG][VP]{[ET]|[MV]}VGY{[ES]|[DT]|[{I|L}C]};AA[{I|L}P]{[ET]|[MV]}VGY{[ES]|[DT]|[{I|L}C]} 4.1632;3.8879;2.4804;1.8238;1.6284;0.99386;0.69269 -;-;-;-;-;-;- 566 + 1 1.684 81675.6 0.5400000214576721 1269 5040 6306 SUDHL4_400M_050219_2,6311 SUDHL4_400M_050219_2,6311,SMYGVDLHKA False False SMYGVDLHKA 31.345513 568.774096667767 651909.8125 6306.0 nc|ENSG00000159023|P11171-5|EPB41;;nc|ENSG00000159023|P11171-2|EPB41;;ENSG00000159023|ENST00000343067|EPB41;;nc|ENSG00000159023|P11171-3|EPB41;;nc|ENSG00000159023|P11171-4|EPB41;;nc|ENSG00000159023|P11171-6|EPB41;;nc|ENSG00000159023|P11171-7|EPB41 6.290449301401774 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6313 31.362 800.0 101720.0 25 0 12689.0 34988 SQLSYYYMGFY 11 106 711.3068376421643 1420.5991223511285 2 711.8005859255791 MULTI CID FTMS 0 0 0 6312 126100.9140625 0.0107807971253781 29 -0.7444686889648438 1 Unmodified _SQLSYYYMGFY_ ENSG00000107669|ENST00000224652|ATE1;nc|ENSG00000107669|O95260-2|ATE1 9.38312468134398 0.8308777417566128 6 {M(Oxidation (M))|F}AGADQA[HD]{M(Oxidation (M))|F}Y 11 9 73.563 0.0 0.0 5.1783 0.0 0.0 180.08833241147846 0.0 180.08833241147846 0.0 56.705127962372174 0.0 0.0 0 0.4247425010840047 0.0 0.6549471895720984 0.805462187404089 {M(Oxidation (M))|F}AGADQA[HD]{M(Oxidation (M))|F}Y 5.1783 - 4103 + 1 1.684 64542.8 0.6399999856948853 1270 5041 6312 SUDHL4_400M_050219_2,6313 SUDHL4_400M_050219_2,6313,SQLSYYYMGFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6314 31.364 81.0 554440.0 25 0 66134.0 + 44227 YLHNQGIGV 9 71 500.76415034899793 999.513747764796 2 500.7640869021416 MULTI CID FTMS 0 0 0 6312 563823.0 0.6074063001828043 -2 0.0824413299560546 2 Unmodified _YLHNQGIGV_ ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 32.78568957990786 0.1150597335874693 6 [VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NQG{I|L}R 9 6 + 39.336 0.0 0.0 3.9355 3.9355 79.439 0.0 0.0 0.0 7.861201800549193 6.778259348524365 6.778259348524365 7.861201800549193 0 0.5 1.6989700043360187 0.0 0.4247425010840047 [VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}NQG{I|L}R;{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]}NQG{I|L}R;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}N[AG]G{I|L}R;[VG]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GGQG{I|L}R;{[VA]|[{I|L}G]}{[YC]|[HE]}{I|L}Y{I|L}GV;[HN]{[QG]|[NA]}{I|L}Y{I|L}GV;{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]}GGQG{I|L}R;{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]}N[AG]G{I|L}R;[HN][Y{I|L}]QG{I|L}GV;[HN][Y{I|L}][AG]G{I|L}GV 3.9355;3.149;3.0143;3.0143;2.3629;2.3519;2.2278;2.2278;1.6826;0.76131 -;-;-;-;-;-;-;-;-;- 113 1 1.684 43363.1 1.0 1271 5041 6312 SUDHL4_400M_050219_2,6314 SUDHL4_400M_050219_2,6314,YLHNQGIGV True True YLHNQGIGV 31.363715 500.764086902142 8762688.0 6312.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B 8.241196791330973 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6315 31.378 800.0 120890.0 25 0 10871.0 + 14987 ILRGGAEQF 9 123 495.771461467504 989.528370001808 2 495.7718383669853 MULTI CID FTMS 0 0 0 6312 86298.421875 1.0 0 0.0 3 Unmodified _ILRGGAEQF_ ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 24.020572477871973 0.2255576514309169 6 {I|L}{I|L}R{[QG]|[NA]}EQ{M(Oxidation (M))|F} 8 2 + 41.749 0.0 0.0 4.2191 4.2191 83.384 0.0 0.0 0.0 8.416375079047498 26.26439250769556 8.416375079047498 9.262137858390815 0 0.7134679910804405 1.3979400086720375 0.0 0.0 {I|L}{I|L}R{[QG]|[NA]}EQ{M(Oxidation (M))|F};{I|L}{I|L}R{[QG]|[NA]}E[AG]{M(Oxidation (M))|F};{[TV]|[{I|L}S]}H[{M(Oxidation (M))|F}V]{I|L}Q{M(Oxidation (M))|F};{[TV]|[{I|L}S]}H[{M(Oxidation (M))|F}V]{I|L}[AG]{M(Oxidation (M))|F};[HT]V[{M(Oxidation (M))|F}V]{I|L}Q{M(Oxidation (M))|F};{[ET]|[MV]}[HK]C{I|L}{I|L}{M(Oxidation (M))|F};[HT]V[{M(Oxidation (M))|F}V]{I|L}[AG]{M(Oxidation (M))|F} 4.2191;3.2831;2.9222;1.9862;1.9399;1.0076;1.0039 -;-;-;-;-;-;- 321 1 1.684 78429.3 0.4600000083446502 1272 5041 6312 SUDHL4_400M_050219_2,6315 SUDHL4_400M_050219_2,6315,ILRGGAEQF False True ILRGGAEQF 31.377527 495.771838366985 460298.46875 6312.0 nc|ENSG00000135624|Q99832-2|CCT7;;nc|ENSG00000135624|Q99832-4|CCT7;;ENSG00000135624|ENST00000258091|CCT7;;nc|ENSG00000135624|Q99832-3|CCT7 3.614845593770345 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6316 31.385 425.0 235970.0 25 0 26142.0 + 17075 KLDQDLNEV 9 122 537.278238242166 1072.541923551132 2 537.2774536013603 MULTI CID FTMS 0 0 0 6312 102526.15625 0.2196396672745607 -5 0.1246871948242187 4 Unmodified _KLDQDLNEV_ ENSG00000108055|ENST00000361804|SMC3 63.960520009940105 0.0238892913700936 6 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}NEV 9 2 + 88.302 0.0 0.0 8.233 8.233 83.365 0.0 0.0 0.0 8.916754340159528 16.478174818886373 8.916754340159528 0.5546218740408904 0 0.3807196863200844 1.0457574905606752 0.8609243748081781 1.7803695511246982 {NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}NEV;{NN|[MP]|[D{I|L}]|[EV]}NEK{I|L}NEV;{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}NEV;{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}K{I|L}NEV;{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}GGEV;{NN|[MP]|[D{I|L}]|[EV]}K[AG]D{I|L}NEV;{NN|[MP]|[D{I|L}]|[EV]}GGEK{I|L}NEV;{NN|[MP]|[D{I|L}]|[EV]}NEK{I|L}GGEV;{NN|[MP]|[D{I|L}]|[EV]}D[AG]K{I|L}NEV;{NN|[MP]|[D{I|L}]|[EV]}DQK{I|L}GGEV 8.233;8.1813;8.1075;7.4016;7.3745;7.3745;7.3227;7.3227;7.2489;7.2489 -;-;-;-;-;-;-;-;-;- 1145 1 1.684 79876.2 1.0 1273 5041 6312 SUDHL4_400M_050219_2,6316 SUDHL4_400M_050219_2,6316,KLDQDLNEV True True KLDQDLNEV 31.385104 537.27745360136 2057893.0 6312.0 ENSG00000108055|ENST00000361804|SMC3 5.0507510503133135 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6318 31.403 800.0 82321.0 25 0 6239.3 -1 FCDQHCLLRFY 11 65 751.3387605935197 1500.6629682538394 2 751.3381225466728 MULTI CID FTMS 0 0 0 6317 83344.15625 0.4451947041284972 5 -0.1331043243408203 1 Carbamidomethyl (C) _FC(Carbamidomethyl (C))DQHCLLRFY_ ENSG00000121741|ENST00000610343|ZMYM2 5.731851221503515 0.8481046878870278 6 EAQQNA{M(Oxidation (M))|F}Y 8 -1 58.576 0.0 0.0 3.9034 0.0 0.0 531.243944236525 0.0 531.243944236525 0.0 36.99982483810974 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.8494850021680094 EAQQNA{M(Oxidation (M))|F}Y 3.9034 - 343 1 1.684 52698.4 0.4699999988079071 1274 5042 6317 SUDHL4_400M_050219_2,6318 SUDHL4_400M_050219_2,6318,FCDQHCLLRFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6319 31.412 525.0 139770.0 25 0 5364.1 + 17146 KLIDPQTQV 9 122 521.3014812928261 1040.588409652452 2 521.3013793826103 MULTI CID FTMS 0 0 0 6317 117076.125 1.0 0 0.0 2 Unmodified _KLIDPQTQV_ ENSG00000157500|ENST00000288266|APPL1;ENST00000482800.5_1_3:57261911-57301862:+|nuORF 66.45667989310934 0.0225072657982126 6 [K{I|L}]{I|L}D[QP]T{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 40.065 0.0 0.0 3.8502 3.8502 74.368 0.0 0.0 0.0 2.498774732165991 7.147642715192497 2.498774732165991 2.498774732165991 0 0.9076960356474644 0.0 0.8494850021680094 0.5891368308784531 + + [K{I|L}]{I|L}D[QP]T{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}K{I|L}[QP]T{[QV]|[N{I|L}]|[RA]|[KV]};[K{I|L}]D{I|L}[QP]T{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}[KP]{[QN]|[E{I|L}]|[KN]}T{[QV]|[N{I|L}]|[RA]|[KV]};{[QN]|[E{I|L}]|[KN]}[{I|L}P]{[QN]|[E{I|L}]|[KN]}T{[QV]|[N{I|L}]|[RA]|[KV]};[K{I|L}][NP]{[QN]|[E{I|L}]|[KN]}T{[QV]|[N{I|L}]|[RA]|[KV]};[K{I|L}]{I|L}[QT][DP]{[QV]|[N{I|L}]|[RA]|[KV]};[NP][K{I|L}]{[QN]|[E{I|L}]|[KN]}T{[QV]|[N{I|L}]|[RA]|[KV]};[K{I|L}][WR][DP]{[QV]|[N{I|L}]|[RA]|[KV]} 3.8502;3.6101;2.9823;1.1991;0.90984;0.74061;0.70381;0.65686;0.081261 +;-;-;-;-;-;-;-;- + 276 1 1.684 60480.1 1.0 1275 5042 6317 SUDHL4_400M_050219_2,6319 SUDHL4_400M_050219_2,6319,KLIDPQTQV True True KLIDPQTQV 31.412071 521.30137938261 940808.625 6317.0 ENST00000482800.5_1_3:57261911-57301862:+|nuORF;;ENSG00000157500|ENST00000288266|APPL1 5.809682369232178 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6320 31.426 800.0 106780.0 25 0 7182.1 + 2416 AQQIQKVVM 9 132 530.7953116604622 0 530.7955810427666 PEAK CID FTMS 0 0 0 6317 120746.8828125 1.0 0 0.0 3 Oxidation (M) _AQQIQKVVM(Oxidation (M))_ ENSG00000161960|ENST00000293831|EIF4A1;ENST00000550578.1_1_12:53547103-53547616:+|nuORF;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000161960|P60842-2|EIF4A1 71.13359017698441 0.0166968128596244 6 {I|L}QHQ{I|L}Q 6 6 36.905 0.0 0.0 3.483 0.0 0.0 113.07883025276176 196.073053228186 309.15188348094773 0.0 0.0 0.0 0.0 0 1.9720499982754136 0.0 0.0 0.6549471895720984 {I|L}QHQ{I|L}Q 3.483 - 123 + 1 1.684 71429.1 0.550000011920929 1276 5042 6317 SUDHL4_400M_050219_2,6320 SUDHL4_400M_050219_2,6320,AQQIQKVVM True False AQQIQKVVM 31.425902 530.795581042767 433562.0625 6317.0 ENST00000550578.1_1_12:53547103-53547616:+|nuORF;;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF 6.214780489603679 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6323 31.437 272.0 187270.0 25 0 24017.0 + 44153 YLDPNQRDL 9 60 567.2829467411661 1132.5513405491322 2 567.2819091677666 MULTI CID FTMS 0 0 0 6322 126224.140625 0.3020616867528985 -3 0.0842819213867187 1 Unmodified _YLDPNQRDL_ ENSG00000189144|ENST00000536220|ZNF573 27.628801355627647 0.1796483985696185 6 [Y{I|L}]DPN 5 4 52.703 0.0 0.0 4.6535 0.0 0.0 0.0 527.2589205377561 527.2589205377561 45.713337517843655 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.7742275032520141 + [Y{I|L}]DPN 4.6535 + + 39 + 1 1.684 45404.4 1.0 1277 5044 6322 SUDHL4_400M_050219_2,6323 SUDHL4_400M_050219_2,6323,YLDPNQRDL False True YLDPNQRDL 31.437362 567.281909167767 4275779.0 6322.0 ENSG00000189144|ENST00000536220|ZNF573 5.186038176218669 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6324 31.451 800.0 131740.0 25 0 9432.3 + 45339 YSMPSTHAM 9 131 528.7096118486411 1055.404670764082 2 528.7100097537041 MULTI CID FTMS 0 0 0 6322 94581.7421875 0.3585397004895334 -4 0.125955581665039 2 2 Oxidation (M) _YSM(Oxidation (M))PSTHAM(Oxidation (M))_ ENSG00000126821|ENST00000247225|SGPP1 74.42276476219924 0.019389277360085 6 YS{M(Oxidation (M))|F}PSTHA{M(Oxidation (M))|F} 9 0 + 72.851 0.0 0.0 6.9026 6.9026 92.074 0.0 0.0 0.0 30.0 10.138050198288012 10.138050198288012 10.138050198288012 0 0.7742275032520141 2.0 0.6549471895720985 0.0 + + YS{M(Oxidation (M))|F}PSTHA{M(Oxidation (M))|F};YS{M(Oxidation (M))|F}P{NN|[MP]|[D{I|L}]|[EV]}EW;YS{M(Oxidation (M))|F}P{NN|[MP]|[D{I|L}]|[EV]}PA{M(Oxidation (M))|F};YS{M(Oxidation (M))|F}PH{[QD]|[EN]|[WG]|[KD]|[RS]}Y;YS{M(Oxidation (M))|F}PS[HS][MT];YS[WY][YQ]{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{NN|[MP]|[D{I|L}]|[EV]}P{M(Oxidation (M))|F}[MT];[VG]{[C(Carbamidomethyl (C))G]|[NC]}TSP{M(Oxidation (M))|F}[MT];Y[HD]{M(Oxidation (M))|F}A[TA][MT];Y[HD]{M(Oxidation (M))|F}A[VS]A{M(Oxidation (M))|F} 6.9026;5.9421;5.6785;5.2315;4.992;3.4519;3.0026;2.0364;1.7694;1.7646 +;-;-;-;-;-;-;-;-;- + 1120 + 1 1.684 86180.2 0.4900000095367431 1278 5044 6322 SUDHL4_400M_050219_2,6324 SUDHL4_400M_050219_2,6324,YSMPSTHAM True False YSMPSTHAM 31.451196 528.710009753704 1301696.375 6322.0 ENSG00000126821|ENST00000247225|SGPP1 11.129091580708822 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6326 31.464 536.0 137380.0 25 0 16864.0 39251 VAAGYLVPLL 10 108 508.3122247563132 1014.6098965794264 2 508.3114807009697 MULTI CID FTMS 0 0 0 6325 83887.9609375 0.8780295044617957 2 -0.0670089721679687 1 Unmodified _VAAGYLVPLL_ ENSG00000059588|ENST00000040877|TARBP1 12.531546534597751 0.6372748319968624 6 GTVV{M(Oxidation (M))|F}V[{I|L}P]{I|L} 9 6 45.143 0.0 0.0 4.4493 0.0 0.0 71.07419783759921 0.0 71.07419783759921 0.0 19.737059521965108 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 GTVV{M(Oxidation (M))|F}V[{I|L}P]{I|L} 4.4493 - 1235 1 1.684 61938.6 1.0 1279 5045 6325 SUDHL4_400M_050219_2,6326 SUDHL4_400M_050219_2,6326,VAAGYLVPLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6327 31.473 463.0 191440.0 25 0 11016.0 14481 IGFVKPAT 8 113 416.751491102754 0 416.7515746951103 PEAK CID FTMS 0 0 0 6325 109258.4296875 0.5947754049744803 -4 0.1056842803955078 2 Unmodified _IGFVKPAT_ ENSG00000151690|ENST00000392328|MFSD6 19.438996006549623 0.4285751805470146 6 KT 2 6 13.003 0.0 0.0 1.5638 0.0 0.0 63.99841339846871 535.3252657525999 599.3236791510686 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 KT 1.5638 - 78 + 1 1.684 74302.8 1.0 1280 5045 6325 SUDHL4_400M_050219_2,6327 SUDHL4_400M_050219_2,6327,IGFVKPAT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6328 31.487 800.0 161280.0 25 0 27795.0 -1 NSDERDCEMR 10 102 635.7408374328647 1269.4671219325294 2 635.7418701052666 MULTI CID FTMS 0 0 0 6325 99085.3515625 0.4610886905323677 -2 0.0252952575683593 3 Oxidation (M) _NSDERDCEM(Oxidation (M))R_ ENSG00000081479|ENST00000649046|LRP2 3.2813086475875832 0.7114585191678878 6 EEK{M(Oxidation (M))|F}{I|L}R 6 -1 42.384 0.0 0.0 3.3387 0.0 0.0 449.0230433322486 0.0 449.0230433322486 0.0 23.64130335360009 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 EEK{M(Oxidation (M))|F}{I|L}R 3.3387 - 463 + 1 1.684 97750.9 0.5 1281 5045 6325 SUDHL4_400M_050219_2,6328 SUDHL4_400M_050219_2,6328,NSDERDCEMR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6330 31.503 800.0 63654.0 25 0 5823.0 20938 LNEISEETTIQ 11 80 638.8174921542727 1275.620431375345 2 638.8172485232353 MULTI CID FTMS 0 0 0 6329 80500.2421875 0.2416681723974499 4 -0.1612491607666015 1 Unmodified _LNEISEETTIQ_ ENSG00000164118|ENST00000503780|CEP44 32.037481411007896 0.3399527776090619 6 {[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}[EP]DG{M(Oxidation (M))|F}{I|L}Q 11 6 + 76.688 0.0 0.0 6.0118 6.0118 78.62 0.0 0.0 0.0 0.6728856924472097 0.6728856924472097 0.6728856924472097 0.6728856924472097 0 1.3494850021680094 1.3010299956639813 0.0 1.024227503252014 {[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}[EP]DG{M(Oxidation (M))|F}{I|L}Q;{I|L}NADQP[PS]{[HG]|PP}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}P[WQ]{[CA]|SS}G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}P[WQ]{[QC]|[C(Carbamidomethyl (C))A]}{M(Oxidation (M))|F}{I|L}Q;{I|L}QGDQP[PS]{[HG]|PP}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}P{M(Oxidation (M))|F}[MN]{[WN]|[YH]}{I|L}Q 6.0118;5.9591;5.4859;4.9704;4.6272;4.4604 -;-;-;-;-;- 300 1 1.684 46296.8 0.550000011920929 1282 5046 6329 SUDHL4_400M_050219_2,6330 SUDHL4_400M_050219_2,6330,LNEISEETTIQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6331 31.512 494.0 183650.0 25 0 14430.0 + 2494 AQYEHDLEVA 10 115 587.772234820335 1173.52991670747 2 587.7723266482353 MULTI CID FTMS 0 0 0 6329 157258.125 0.923697904716453 -1 0.0353145599365234 2 Unmodified _AQYEHDLEVA_ ENSG00000132341|ENST00000543796|RAN;ENST00000413691.2_1_4:174554896-174555010:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 27.22323531849824 0.3570408936368626 6 [HD]{I|L}EYE[QA]VA 10 7 + 46.419 0.0 0.0 3.9555 3.9555 72.29 0.0 0.0 0.0 0.9691001300805624 16.532125137753436 0.9691001300805624 0.9691001300805624 0 0.5 0.0 0.805462187404089 0.0 [HD]{I|L}EYE[QA]VA;{[YC]|[HE]}VEYE[QA]VA;[HD]{I|L}EY[QA]EVA;[HD]E{I|L}YE[QA]VA;{[YC]|[HE]}VEY[QA]EVA;{[YC]|[HE]}D{I|L}YE[QA]VA;[HD]E{I|L}Y[QA]EVA;{[YC]|[HE]}D{I|L}Y[QA]EVA;[HD]EY{I|L}E[QA]VA;{[YC]|[HE]}DY{I|L}E[QA]VA 3.9555;3.873;3.6311;3.549;3.5485;3.4664;3.2246;3.142;3.0359;2.9534 -;-;-;-;-;-;-;-;-;- 407 1 1.684 75834.1 1.0 1283 5046 6329 SUDHL4_400M_050219_2,6331 SUDHL4_400M_050219_2,6331,AQYEHDLEVA False True AQYEHDLEVA 31.511618 587.772326648235 812407.5625 6329.0 ENST00000413691.2_1_4:174554896-174555010:-|nuORF;;ENST00000455094.1_1_6:30454046-30454364:+|nuORF;;ENSG00000132341|ENST00000543796|RAN 6.263829072316487 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6332 31.518 366.0 231010.0 25 0 18705.0 + 22682 LQAKQQAEV 9 106 507.78265208149736 1013.5507512297949 2 507.7831298708916 MULTI CID FTMS 0 0 0 6329 134391.4375 0.4613671576371707 -2 0.0567169189453125 3 Unmodified _LQAKQQAEV_ chr3:133450464-133466828|47|20.57|0.39|5.71|+|0|BFSP2,BFSP2|1;ENSG00000170819|ENST00000302334|BFSP2 37.97399986684836 0.0865783450051559 6 {NN|[MP]|[D{I|L}]|[EV]}A{[NV]|[RG]}A{I|L}AEV 10 5 + 51.744 0.0 0.0 5.1052 5.1052 78.999 0.0 0.0 0.0 3.0102999566398125 14.47621246364342 3.0102999566398125 3.0102999566398125 0 1.110924374808178 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}A{[NV]|[RG]}A{I|L}AEV;{[CP]|[EA]}V{[NV]|[RG]}A{I|L}AEV;[Q{I|L}][RD]A{I|L}AEV;{[CP]|[EA]}RRA{I|L}AEV;{[CP]|[EA]}{I|L}[RN]{I|L}AEV;[{I|L}A]D{[NV]|[RG]}A{I|L}AEV;[{I|L}A]G[RD]A{I|L}AEV;{[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}A{I|L}AEV;[{I|L}A]E[RN]{I|L}AEV;{NN|[MP]|[D{I|L}]|[EV]}A{[NV]|[RG]}[RV]EV 5.1052;4.8082;4.6079;4.4608;4.3375;4.1186;3.9449;3.8667;3.6479;2.5321 -;-;-;-;-;-;-;-;-;- 242 1 1.684 70389.4 1.0 1284 5046 6329 SUDHL4_400M_050219_2,6332 SUDHL4_400M_050219_2,6332,LQAKQQAEV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6334 31.535 800.0 91680.0 25 0 13370.0 24121 LYLYCHELS 9 106 570.7714204231397 1139.528287913079 2 571.2722656130791 MULTI CID FTMS 0 0 0 6333 57836.2421875 0.6501384138532937 1 -0.0523052215576171 1 Unmodified _LYLYCHELS_ ENSG00000197323|ENST00000358465|TRIM33;nc|ENSG00000197323|Q9UPN9-2|TRIM33 18.13498045792455 0.3457906370836843 6 [Y{I|L}][WC(Carbamidomethyl (C))]NKGS{I|L} 9 6 + 15.707 0.0 0.0 1.3784 1.3784 73.043 0.0 0.0 0.0 4.993525041105883 3.488375062785977 3.488375062785977 4.716235816543756 0 0.8182503180159344 2.0 0.2396518287104437 0.0 [Y{I|L}][WC(Carbamidomethyl (C))]NKGS{I|L};[Y{I|L}][W{M(Oxidation (M))|F}]{[WT]|[RM]}QP;[Y{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}[WR]QP;[Y{I|L}][W{M(Oxidation (M))|F}]{[WT]|[RM]}GAP;[Y{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}[WR]GAP 1.3784;0.96449;0.9136;0.39126;0.34037 -;-;-;-;- 122 + 1 1.684 58889.5 0.4799999892711639 1285 5047 6333 SUDHL4_400M_050219_2,6334 SUDHL4_400M_050219_2,6334,LYLYCHELS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6335 31.548 800.0 68606.0 25 0 6671.0 + -1 NMFCTRLSRCF 11 59 754.3318550279587 1506.6491571227173 2 754.3343994021416 MULTI CID FTMS 0 0 0 6333 101660.75 1.0 0 0.0 2 2 Carbamidomethyl (C),Oxidation (M) _NM(Oxidation (M))FC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 5.296884461304476 0.8501568894076437 6 VDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 54.346 0.0 0.0 3.6071 0.0 0.0 522.2142201154312 0.0 522.2142201154312 0.0 43.087177872842766 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.4247425010840047 VDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.6071 - 242 1 1.684 44108.5 0.4799999892711639 1286 5047 6333 SUDHL4_400M_050219_2,6335 SUDHL4_400M_050219_2,6335,NMFCTRLSRCF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6336 31.562 800.0 96714.0 25 0 24935.0 -1 0 41 1174.7974044333257 3521.3703839001773 3 1175.467333972454 MULTI CID FTMS 0 0 0 6333 119303.3125 0.1117468638511625 -6 0.1726932525634765 3 6 {M(Oxidation (M))|F}N 2 -1 10.445 0.0 0.0 0.29663 0.0 0.0 2587.9581023021374 669.3203219049436 3257.278424207081 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}N 0.29663 - 93 + 1 1.684 72765.7 0.3799999952316284 1287 5047 6333 SUDHL4_400M_050219_2,6336 SUDHL4_400M_050219_2,6336, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6337 31.57 463.0 181430.0 25 0 18708.0 + 39270 VATEKAVEL 9 112 480.2738368623373 958.5331207914744 2 480.2715942263603 MULTI CID FTMS 0 0 0 6333 100104.96875 0.2322828913201775 -4 0.0923042297363281 4 Unmodified _VAASTGIDLL_ ENST00000461139.5_1_3:53259774-53265639:-|nuORF;nc|ENSG00000163931|P29401-2|TKT;ENST00000460243.1_1_3:53262881-53263452:-|nuORF;ENSG00000163931|ENST00000462138|TKT;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;ENST00000460343.5_1_3:53261754-53265639:-|nuORF 26.88365393820708 0.3646707531412818 6 {[VA]|[{I|L}G]}GVTTA{[QN]|[E{I|L}]|[KN]}V 10 6 + 51.151 0.0 0.0 5.3364 5.3364 79.487 0.0 0.0 0.0 5.511525224473814 6.020599913279625 5.511525224473814 2.8523572848074963 0 0.5 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}GVTTA{[QN]|[E{I|L}]|[KN]}V;{[VA]|[{I|L}G]}KETA{[QN]|[E{I|L}]|[KN]}V;{[VA]|[{I|L}G]}EKTA{[QN]|[E{I|L}]|[KN]}V;{[VA]|[{I|L}G]}GVTTE[{I|L}A]V;{[QV]|[N{I|L}]|[RA]|[KV]}VTTA{[QN]|[E{I|L}]|[KN]}V;{[VA]|[{I|L}G]}GVTTAV{[QN]|[E{I|L}]|[KN]};{[VA]|[{I|L}G]}KETE[{I|L}A]V;{[VA]|[{I|L}G]}EKTE[{I|L}A]V;{[VA]|[{I|L}G]}KETAV{[QN]|[E{I|L}]|[KN]};{[QV]|[N{I|L}]|[RA]|[KV]}VTTE[{I|L}A]V 5.3364;5.0388;4.9085;4.8933;4.7614;4.7083;4.5957;4.4653;4.4107;4.3183 -;-;-;-;-;-;-;-;-;- 962 1 1.684 70584.2 1.0 1288 5047 6333 SUDHL4_400M_050219_2,6337 SUDHL4_400M_050219_2,6337,VAASTGIDLL False False VATEKAVEL 31.570495 480.27159422636 2242939.0 6333.0 ENST00000461139.5_1_3:53259774-53265639:-|nuORF;;nc|ENSG00000163931|P29401-2|TKT;;ENST00000460243.1_1_3:53262881-53263452:-|nuORF;;ENSG00000163931|ENST00000462138|TKT;;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;;ENST00000460343.5_1_3:53261754-53265639:-|nuORF 0.3035638531049092 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6339 31.577 105.0 461890.0 25 0 67924.0 -1 ASYLCLLP 8 68 468.7485148801517 935.4824768271036 2 468.7486450076103 MULTI CID FTMS 0 0 0 6338 531481.0625 0.7275487722733125 1 -0.0364799499511718 1 Carbamidomethyl (C) _ASYLC(Carbamidomethyl (C))LLP_ ENSG00000021776|ENST00000156471|AQR 19.438996006549623 0.6237395211498085 6 [HN]G{I|L}Q{[SA]|[TG]}[{I|L}P] 9 -1 + 23.974 0.0 0.0 2.5628 2.5628 68.496 0.0 0.0 0.0 0.5799194697768684 6.782891498745588 0.5799194697768684 0.4402281476392033 0 0.5 0.0 0.0 0.7302046884880937 [HN]G{I|L}Q{[SA]|[TG]}[{I|L}P];[HN]GQ{[SA]|[TG]}{I|L}[{I|L}P];[H{I|L}]NGQ{[SA]|[TG]}[{I|L}P];[HN]GQ{I|L}{[SA]|[TG]}[{I|L}P];[HN]{I|L}GQ{[SA]|[TG]}[{I|L}P];[HN]G{I|L}T{[QG]|[NA]}[{I|L}P];[H{I|L}]NGT{[QG]|[NA]}[{I|L}P];[HN]{I|L}GT{[QG]|[NA]}[{I|L}P];[HN]G{I|L}[AG]{[SA]|[TG]}[{I|L}P];[HN]G[AG]{[SA]|[TG]}{I|L}[{I|L}P] 2.5628;2.5157;2.5008;2.3214;2.241;1.9723;1.9103;1.6505;1.5785;1.5314 -;-;-;-;-;-;-;-;-;- 157 1 1.684 45998.5 1.0 1289 5048 6338 SUDHL4_400M_050219_2,6339 SUDHL4_400M_050219_2,6339,ASYLCLLP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6340 31.582 275.0 318220.0 25 0 38429.0 + 16126 ITSSAVTTALK 11 117 546.3190456511188 1090.6235383690375 2 546.3195678591728 MULTI CID FTMS 0 0 0 6338 300712.59375 0.039120790072868 -7 0.2249984741210937 2 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 41.34703777101937 0.1916454788238683 6 {I|L}TSSAVTTA{I|L}K 11 0 + 98.32 0.0 0.0 9.015 9.015 97.645 0.0 0.0 0.0 68.04014789357785 12.965183905326626 12.965183905326626 22.316085869055115 0 0.4247425010840047 2.0 0.4247425010840047 0.1803115997617927 + + {I|L}TSSAVTTA{I|L}K;{I|L}TS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TTA{I|L}K 9.015;6.9688 +;- + 654 + 1 1.684 69670.9 1.0 1290 5048 6338 SUDHL4_400M_050219_2,6340 SUDHL4_400M_050219_2,6340,ITSSAVTTALK False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 6341 31.596 800.0 130210.0 25 0 9231.6 6776 EEADWIYRNAF 11 130 707.3230957089927 1412.6316384847853 2 707.3229247927666 MULTI CID FTMS 0 0 0 6338 122247.765625 0.4377547181466075 -3 0.1193141937255859 3 Unmodified _EEADWIYRNAF_ ENSG00000109111|ENST00000314616|SUPT6H;nc|ENSG00000109111|Q7KZ85-3|SUPT6H 19.361941925380144 0.6323962752489956 6 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F} 12 7 + 90.145 0.0 0.0 6.3814 6.3814 87.967 0.0 0.0 0.0 1.0340874929963917 54.91992656234899 1.0340874929963917 8.855958663988972 0 0.9456290139465237 0.0 0.3252574989159953 2.361407999752478 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}G[KS]{[YD]|[{M(Oxidation (M))|F}M]}AQQNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}A[AG]QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQ[AG]NA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQGGA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}[VP]{[YD]|[{M(Oxidation (M))|F}M]}QNA{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}AQQNA{M(Oxidation (M))|F};{[QG]|[NA]}GAS[KQ]{[YD]|[{M(Oxidation (M))|F}M]}QNA{M(Oxidation (M))|F};{[QG]|[NA]}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][WK]QQNA{M(Oxidation (M))|F};{[QG]|[NA]}GA{M(Oxidation (M))|F}[HT][HV]QNA{M(Oxidation (M))|F} 6.3814;5.7545;5.7373;5.7373;5.7373;5.3625;5.2644;5.102;5.001;4.9923 -;-;-;-;-;-;-;-;-;- 11416 1 1.684 74940.7 0.5299999713897705 1291 5048 6338 SUDHL4_400M_050219_2,6341 SUDHL4_400M_050219_2,6341,EEADWIYRNAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6342 31.607 655.0 167840.0 25 0 41608.0 33192 SFFWDKIWPA 10 91 432.8850519643625 0 432.8852111697197 PEAK CID FTMS 0 0 0 6338 130767.1484375 0.5729812402691371 245 -6.145278930664063 4 Unmodified _SFFWDKIWPA_ ENSG00000125508|ENST00000217188|SRMS 2.0860074813731053 0.3961065659209837 6 GD 2 9 7.9588 0.0 0.0 0.92142 0.0 0.0 259.465952462125 429.2128389947876 688.6787914569126 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GD 0.92142 - 7 + 1 1.684 93420.7 1.0 1292 5048 6338 SUDHL4_400M_050219_2,6342 SUDHL4_400M_050219_2,6342,SFFWDKIWPA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6344 31.613 170.0 366140.0 25 0 19362.0 + 1498 ALGRTLFLS 9 106 489.2923100061832 976.5700670791664 2 489.2923156619072 MULTI CID FTMS 0 0 0 6343 197611.4375 0.1630075104085531 7 -0.21112060546875 1 Unmodified _ALGRTLFLS_ REV__ENST00000424484.5_1_1:45155363-45158665:+|nuORF 23.1484247019978 0.2366544122328345 6 [R{I|L}]PPP[TP]S{I|L} 9 -1 + 17.786 0.0 0.0 1.8213 1.8213 75.416 0.0 0.0 0.0 0.5071853683143814 6.114079997524783 0.5071853683143814 7.319145446206697 0 0.4876954943324546 0.0 0.4247425010840047 0.0 [R{I|L}]PPP[TP]S{I|L};[{M(Oxidation (M))|F}V][K{I|L}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T{I|L};[{I|L}A]G[{M(Oxidation (M))|F}T][R{I|L}]S{I|L};[R{I|L}][YK][TP]S{I|L} 1.8213;1.0718;0.53395;0.41154 -;-;-;- 107 1 1.684 51980.7 1.0 1293 5049 6343 SUDHL4_400M_050219_2,6344 SUDHL4_400M_050219_2,6344,ALGRTLFLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6345 31.627 800.0 110780.0 25 0 10221.0 + 31200 RLQEDPPVGV 10 112 555.3005560921989 1108.5865592511975 2 555.3004028201103 MULTI CID FTMS 0 0 0 6343 89337.453125 0.4020315768209014 7 -0.21112060546875 2 Unmodified _RLQEDPPVGV_ ENSG00000119048|ENST00000265339|UBE2B;ENST00000511807.1_1_5:133707262-133710155:+|nuORF 24.99096001346401 0.4071966087057876 6 [PS]D[RV]SP[VP]GV 11 6 + 52.8 0.0 0.0 4.7628 4.7628 74.488 0.0 0.0 0.0 0.7737918391321159 13.350173362051509 0.7737918391321159 0.7737918391321159 0 1.25 1.2218487496163564 0.6549471895720985 0.2614393726401688 [PS]D[RV]SP[VP]GV;[VG]PP{[CT]|[{M(Oxidation (M))|F}G]}SP[VP]GV;[DP]S[RV]SP[VP]GV;[VG]PP{[CT]|[{M(Oxidation (M))|F}G]}S[RH]GV;[VG]PP[YQ]P[VP]GV;[PS]D[RV]S[RH]R;[VG]PP[YQ][RH]GV;[DP][WR]SP[VP]R;[DP]S[RV]S[RH]R;[VP]GP{[CT]|[{M(Oxidation (M))|F}G]}SP[VP]GV 4.7628;4.693;4.4913;4.0966;3.9362;3.5586;3.343;3.287;3.287;3.2732 -;-;-;-;-;-;-;-;-;- 209 1 1.684 74023.9 0.5299999713897705 1294 5049 6343 SUDHL4_400M_050219_2,6345 SUDHL4_400M_050219_2,6345,RLQEDPPVGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6346 31.638 649.0 190820.0 25 0 10908.0 + 26064 NMVAKVDEV 9 134 510.75493577791656 1019.4953186226332 2 510.7551147341728 MULTI CID FTMS 0 0 0 6343 166828.703125 0.1855225333425078 -4 0.1557941436767578 3 Oxidation (M) _NM(Oxidation (M))VAKVDEV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 70.33199760932243 0.0209706178985989 6 GG{M(Oxidation (M))|F}V{M(Oxidation (M))|F}DVVAG 10 7 59.563 0.0 0.0 5.8424 0.0 0.0 0.0 68.05124841861561 68.05124841861561 30.053950318867063 0.0 0.0 0.0 0 0.9247425010840048 1.0969100130080565 0.7742275032520141 0.0 GG{M(Oxidation (M))|F}V{M(Oxidation (M))|F}DVVAG 5.8424 - 1622 + 1 1.684 99623.5 1.0 1295 5049 6343 SUDHL4_400M_050219_2,6346 SUDHL4_400M_050219_2,6346,NMVAKVDEV True False NMVAKVDEV 31.63798 510.755114734173 4619310.0 6343.0 ENST00000478340.2_1_6:35437033-35438524:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENSG00000198755|ENST00000322203|RPL10A 6.786714394887288 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6347 31.648 557.0 146290.0 25 0 24585.0 + 21516 LPIIETTL 8 101 450.2746238137866 898.5346946943732 2 450.2743102908134 MULTI CID FTMS 0 0 0 6343 150572.53125 0.965558335787314 -1 0.0364799499511718 4 Unmodified _LPIIETTL_ REV__ENSG00000144580|ENST00000273064|CNOT9;REV__nc|ENSG00000144580|Q92600-2|CNOT9;REV__nc|ENSG00000144580|Q92600-3|CNOT9 18.13498045792455 0.6430038125133779 6 TT{I|L} 3 -1 25.222 0.0 0.0 2.807 0.0 0.0 565.3383578797233 0.0 565.3383578797233 0.0 17.99828584139883 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 TT{I|L} 2.807 + + 37 + 1 1.684 69056.3 1.0 1296 5049 6343 SUDHL4_400M_050219_2,6347 SUDHL4_400M_050219_2,6347,LPIIETTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6349 31.656 343.0 123810.0 25 0 12748.0 43305 WKWDPGLV 8 73 500.76415034899793 999.513747764796 2 500.7644531130791 MULTI CID FTMS 0 0 0 6348 66479.609375 0.0716184575089466 7 -0.1996421813964843 1 Unmodified _WKWDPGLV_ ENST00000428206.5_1_7:72721469-72721618:-|nuORF 11.640296217721598 0.738950129755968 6 V 1 7 18.099 0.0 0.0 1.8108 0.0 0.0 882.4343390507319 0.0 882.4343390507319 0.0 1.7288529850385004 0.0 0.0 0 0.5 0.0 0.0 0.0 + V 1.8108 + + 24 + 1 1.684 39976.7 1.0 1297 5050 6348 SUDHL4_400M_050219_2,6349 SUDHL4_400M_050219_2,6349,WKWDPGLV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6350 31.667 599.0 138900.0 25 0 16875.0 + -1 PNEKQCHPCFY 11 109 711.801339494547 0 711.8000366091728 PEAK CID FTMS 0 0 0 6348 135863.515625 0.7437352797077906 -2 0.077249526977539 2 Carbamidomethyl (C) _PNEKQC(Carbamidomethyl (C))HPCFY_ REV__ENSG00000109674|ENST00000264596|NEIL3 12.240655878213236 0.4295705806160874 6 AQNEAED 7 -1 61.19 0.0 0.0 4.3044 0.0 0.0 328.1441922889276 333.1328524225219 661.2770447114495 0.0 0.0 0.0 0.0 0 0.5 0.0 0.9604093769761876 0.8494850021680094 AQNEAED 4.3044 - 2349 + 1 1.684 61995.7 1.0 1298 5050 6348 SUDHL4_400M_050219_2,6350 SUDHL4_400M_050219_2,6350,PNEKQCHPCFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6351 31.672 253.0 206560.0 25 0 40475.0 + 11828 GLPGHLTE 8 71 412.2197441743304 822.4249354154607 2 412.2212402224541 MULTI CID FTMS 0 0 0 6348 99951.6484375 0.916117446359006 2 -0.0738849639892578 3 Unmodified _GLPGHLTE_ REV__ENSG00000163646|ENST00000327047|CLRN1;REV__nc|ENSG00000163646|P58418-1|CLRN1;REV__nc|ENSG00000163646|P58418-4|CLRN1 28.17323086031832 0.4514957916281387 6 [H{I|L}][NP]{I|L}TE 7 -1 + 31.215 0.0 0.0 3.7955 3.7955 82.372 0.0 0.0 0.0 0.1620784287699805 19.061281911740195 0.1620784287699805 10.0 0 0.6989700043360187 1.3979400086720375 0.0 0.0 [H{I|L}][NP]{I|L}TE;[NP]{I|L}H{I|L}TE 3.7955;2.5795 -;- 39 1 1.684 45447.6 1.0 1299 5050 6348 SUDHL4_400M_050219_2,6351 SUDHL4_400M_050219_2,6351,GLPGHLTE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6353 31.689 800.0 130230.0 25 0 17157.0 + 19739 LGPPRLAPG 9 115 439.266509429665 876.51846592613 2 439.2669860720634 MULTI CID FTMS 0 0 0 6352 90146.1484375 0.027206761338823 136 -2.849693298339844 1 Unmodified _LGPPRLAPG_ REV__ENST00000297533.8_1_7:150778427-150778592:-|nuORF 16.942295170755138 0.3780752226737986 6 {[VA]|[{I|L}G]}PPA 5 -1 41.224 0.0 0.0 4.7031 0.0 0.0 0.0 438.2472537343627 438.2472537343627 29.96457760951447 0.0 0.0 0.0 0 0.25 2.0 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.7031 - 125 + 1 1.684 82830.7 0.4099999964237213 1300 5051 6352 SUDHL4_400M_050219_2,6353 SUDHL4_400M_050219_2,6353,LGPPRLAPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6354 31.694 253.0 433190.0 25 0 43959.0 + 29512 QLLGSAHEV 9 111 477.2562180950675 952.497883256935 2 477.2557556033134 MULTI CID FTMS 0 0 0 6352 287510.875 0.2599999841745126 -4 0.1534862518310547 2 Unmodified _QLLGSAHEV_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 58.6788170122104 0.0268135626297836 6 [Q{I|L}]{I|L}GSA 6 3 40.335 0.0 0.0 4.2347 0.0 0.0 0.0 380.15800122209305 380.15800122209305 14.172047188241628 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.3252574989159953 0.0 + [Q{I|L}]{I|L}GSA 4.2347 + + 310 + 1 1.684 88913.6 1.0 1301 5051 6352 SUDHL4_400M_050219_2,6354 SUDHL4_400M_050219_2,6354,QLLGSAHEV True True QLLGSAHEV 31.694065 477.255755603313 10407354.0 6352.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 5.733795166015625 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6355 31.698 212.0 268400.0 25 0 19352.0 + 18656 LAGYLFFF 8 94 489.2617105575344 976.5088681818688 2 489.2617370486259 MULTI CID FTMS 0 0 0 6352 125409.6953125 1.0 0 0.0 3 Unmodified _LAGYLFFF_ REV__ENSG00000123560|ENST00000621218|PLP1;REV__ENST00000476160.1_1_X:103041108-103041682:+|nuORF;REV__ENST00000485931.5_1_X:103031923-103041682:+|nuORF;REV__nc|ENSG00000123560|P60201-2|PLP1 17.086550045450526 0.6584923310065985 6 [{I|L}A]G 3 -1 18.645 0.0 0.0 1.9094 0.0 0.0 0.0 732.3430868920827 732.3430868920827 3.891252645201785 0.0 0.0 0.0 0 0.5 1.2218487496163564 0.0 0.0 [{I|L}A]G 1.9094 + + 205 1 1.684 52014.7 1.0 1302 5051 6352 SUDHL4_400M_050219_2,6355 SUDHL4_400M_050219_2,6355,LAGYLFFF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6356 31.708 559.0 156390.0 25 0 6872.3 + 30877 RINPQTTEF 9 107 553.2839487478943 1104.5533445625886 2 553.2829467654228 MULTI CID FTMS 0 0 0 6352 99235.09375 0.6104692360721554 -3 0.1011810302734375 4 Unmodified _RINPQTTEF_ ENSG00000138231|ENST00000260803|DBR1;nc|ENSG00000138231|Q9UK59-2|DBR1 21.53697664764585 0.2571576504437394 6 [R{I|L}]N[QP]TTE{M(Oxidation (M))|F} 9 0 + 51.66 0.0 0.0 4.677 4.677 83.703 0.0 0.0 0.0 8.484769324350552 33.07660078222966 8.484769324350552 9.208187539523747 0 0.5 0.8538719643217619 0.9247425010840048 0.0 + + [R{I|L}]N[QP]TTE{M(Oxidation (M))|F};[R{I|L}]GG[QP]TTE{M(Oxidation (M))|F};[R{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}KEE{M(Oxidation (M))|F};[R{I|L}]N[QP][PS]{M(Oxidation (M))|F}{M(Oxidation (M))|F};[Q{I|L}][KQ][DP]TE{M(Oxidation (M))|F};[R{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}[VG]TE{M(Oxidation (M))|F};[R{I|L}]N[QP]GHH{M(Oxidation (M))|F};[Q{I|L}][KQ][PS]EE{M(Oxidation (M))|F};[Q{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}[{I|L}A]TE{M(Oxidation (M))|F};[QT][RH]GRG{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4.677;3.8434;3.274;3.0037;2.9379;2.8674;2.1422;2.1214;1.7358;1.7051 +;-;-;-;-;-;-;-;-;- + 274 1 1.684 72794.8 1.0 1303 5051 6352 SUDHL4_400M_050219_2,6356 SUDHL4_400M_050219_2,6356,RINPQTTEF False True RINPQTTEF 31.707892 553.282946765423 789593.0 6352.0 nc|ENSG00000138231|Q9UK59-2|DBR1;;ENSG00000138231|ENST00000260803|DBR1 6.738467534383138 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6357 31.722 800.0 191520.0 25 0 21882.0 + 17290 KLQEKIQEL 9 148 564.8347197490239 1127.6548865648476 2 564.8345825076103 MULTI CID FTMS 0 0 0 6352 95224.6796875 0.4799011956465419 -5 0.1851806640625 5 Unmodified _KLQEKIQEL_ ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE 103.82355648334676 0.0089708497247674 6 K{I|L}{M(Oxidation (M))|F}K{I|L}KQE 8 4 85.98 0.0 0.0 7.6247 0.0 0.0 0.0 110.06160913638904 110.06160913638904 67.39659223515832 0.0 0.0 0.0 0 2.1549471895720984 0.6777807052660807 1.666386562212267 0.8494850021680094 K{I|L}{M(Oxidation (M))|F}K{I|L}KQE 7.6247 - 2024 + 1 1.684 116334.7 0.4799999892711639 1304 5051 6352 SUDHL4_400M_050219_2,6357 SUDHL4_400M_050219_2,6357,KLQEKIQEL True True KLQEKIQEL 31.721721 564.83458250761 930805.375 6352.0 nc|ENSG00000138778|Q02224-3|CENPE;;ENSG00000138778|ENST00000265148|CENPE 3.864588816960653 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6359 31.738 800.0 106150.0 25 0 11185.0 + 44154 YLDPNQRDL 9 103 567.2829467411661 1132.5513405491322 2 567.2828246951103 MULTI CID FTMS 0 0 0 6358 78932.53125 0.1888901236403317 5 -0.1257572174072265 1 Unmodified _YLDPNQRDL_ ENSG00000189144|ENST00000536220|ZNF573 19.361941925380144 0.3125782356748823 6 [Y{I|L}]DPN[HV]{I|L}Y 9 4 + 47.33 0.0 0.0 4.179 4.179 77.536 0.0 0.0 0.0 31.166280273229177 3.3893999196139646 3.3893999196139646 4.446603393793112 0 0.9247425010840048 2.0 0.0 0.0 [Y{I|L}]DPN[HV]{I|L}Y;[Y{I|L}]D{I|L}[MT][KS]Y;[Y{I|L}]D[YV]{I|L}ANY;[Y{I|L}]DPGG[HV]{I|L}Y;[Y{I|L}]DP[RP][EP]{M(Oxidation (M))|F};[Y{I|L}]D{[WN]|[YH]}{[QV]|[N{I|L}]|[RA]|[KV]}[VP];[Y{I|L}][YQ][KA]ANY;[Y{I|L}]DP[RP][NG]{[DS]|[MA]|[CV]|TT};[{I|L}T]C[H{I|L}][RN]NY;[{I|L}A][DP]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}ANY 4.179;3.7864;3.6558;3.366;2.8923;2.5482;2.3049;2.2841;0.83328;0.26077 -;-;-;-;-;-;-;-;-;- 409 + 1 1.684 66967.1 0.6600000262260437 1305 5052 6358 SUDHL4_400M_050219_2,6359 SUDHL4_400M_050219_2,6359,YLDPNQRDL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6360 31.752 800.0 129980.0 25 0 13737.0 + 17565 KPQNERILL 9 100 555.8351255021212 0 555.8352538943291 PEAK CID FTMS 0 0 0 6358 103872.125 0.8330768743965258 -3 0.114654541015625 2 Unmodified _KPQNERILL_ REV__ENSG00000115616|ENST00000233969|SLC9A2 30.63653989081413 0.1077493867305487 6 PT 2 -1 24.464 0.0 0.0 2.2046 0.0 0.0 128.09459791695105 780.4380312573002 908.5326291742512 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 PT 2.2046 - 72 + 1 1.684 87161.0 0.5099999904632568 1306 5052 6358 SUDHL4_400M_050219_2,6360 SUDHL4_400M_050219_2,6360,KPQNERILL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6362 31.765 558.0 146270.0 25 0 16126.0 + -1 MQYPGRSL 8 96 484.23676077669865 966.4589686201972 2 484.2370788455009 MULTI CID FTMS 0 0 0 6361 59625.421875 0.4232295714708909 4 -0.0957298278808593 1 Oxidation (M) _M(Oxidation (M))QYPGRSL_ nc|ENSG00000089737|Q9GZR7-2|DDX24;ENSG00000089737|ENST00000621632|DDX24;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 8.745405648335112 0.7712480472641603 6 {I|L}YQE 4 -1 15.08 0.0 0.0 1.5604 0.0 0.0 415.2156544416032 0.0 415.2156544416032 0.0 2.316030857881266 0.0 0.0 0 0.6663865622122673 0.0 0.0 0.0 {I|L}YQE 1.5604 - 149 1 1.671 71363.3 1.0 1307 5053 6361 SUDHL4_400M_050219_2,6362 SUDHL4_400M_050219_2,6362,MQYPGRSL False False MQYPGRSL 31.765323 484.237078845501 988197.75 6361.0 nc|ENSG00000089737|Q9GZR7-2|DDX24;;ENSG00000089737|ENST00000621632|DDX24;;ENST00000555762.1_1_14:94524146-94547480:-|nuORF 3.730556488037109 2.0 True 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6363 31.768 141.0 478940.0 25 0 48456.0 17006 KIYHLPDAE 9 90 543.2843940519017 1084.5542351706033 2 543.2841064333916 MULTI CID FTMS 0 0 0 6361 69840.3125 0.478711908132484 -2 0.0799808502197265 2 Unmodified _KIYHLPDAE_ ENSG00000168385|ENST00000391971|SEPTIN2;ENST00000481500.1_1_2:242277175-242285749:+|nuORF;nc|ENSG00000168385|Q15019-2|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2 3.944395688203298 0.7769873103969335 6 Y 1 8 12.218 0.0 0.0 1.1266 0.0 0.0 903.4800297036096 0.0 903.4800297036096 0.0 -6.989700043360188 -6.989700043360188 0.0 0 0.0 0.0 0.0 0.0 + Y 1.1266 + + 35 + 1 1.671 56896.0 1.0 1308 5053 6361 SUDHL4_400M_050219_2,6363 SUDHL4_400M_050219_2,6363,KIYHLPDAE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6364 31.78 690.0 174290.0 25 0 12390.0 + 22785 LQRVTKESK 9 158 363.55383920255554 1087.6396882078666 3 363.5541869997978 MULTI CID FTMS 0 0 0 6361 80097.5234375 0.8025850444086052 -1 0.0300273895263671 3 Unmodified _LQRVTKESK_ REV__ENSG00000204815|ENST00000377540|ODAD4;REV__ENST00000585530.1_1_17:40091759-40093269:+|nuORF;REV__nc|ENSG00000204815|Q96NG3-2|ODAD4 8.155526934196011 0.6299788542272896 6 VV{M(Oxidation (M))|F}PER 6 -1 31.419 0.0 0.0 2.8888 0.0 0.0 342.2260953894541 0.0 342.2260953894541 0.0 20.310253421807545 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 VV{M(Oxidation (M))|F}PER 2.8888 - 114 + 1 1.671 100622.6 1.0 1309 5053 6361 SUDHL4_400M_050219_2,6364 SUDHL4_400M_050219_2,6364,LQRVTKESK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6365 31.794 800.0 85259.0 25 0 3404.2 + -1 RMKQVEELY 9 115 606.3081372175659 1210.6017215019317 2 606.3089477419853 MULTI CID FTMS 0 0 0 6361 101403.40625 1.0 0 0.0 4 Oxidation (M) _RM(Oxidation (M))KQVEELY_ nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1 21.53697664764585 0.2571576504437394 6 {NN|[MP]|[D{I|L}]|[EV]}{[ET]|[MV]}{[ET]|[MV]}VE{I|L}Y 10 -1 + 38.35 0.0 0.0 3.1679 3.1679 74.898 0.0 0.0 0.0 0.5584810522916683 31.896512253176823 0.5584810522916683 4.6560458488244905 0 1.0 1.3010299956639813 0.4247425010840047 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[ET]|[MV]}{[ET]|[MV]}VE{I|L}Y;[{I|L}T]T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VEE{I|L}Y;{[QN]|[E{I|L}]|[KN]}{[ES]|[DT]|[{I|L}C]}{[ET]|[MV]}VE{I|L}Y;[{I|L}T]T{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EVE{I|L}Y;[R{M(Oxidation (M))|F}][KQ]VEE{I|L}Y;[R{M(Oxidation (M))|F}][KQ]EVE{I|L}Y;[{I|L}T][{M(Oxidation (M))|F}V][TP]EE{I|L}Y;[QA]MK{[ET]|[MV]}VE{I|L}Y;[KT][DN]{[ET]|[MV]}VE{I|L}Y;{[TV]|[{I|L}S]}[HV][HD]VE{I|L}Y 3.1679;2.7833;2.7818;2.6368;2.4607;2.3142;1.9325;1.8693;1.4926;1.4605 -;-;-;-;+;-;-;-;-;- + 393 1 1.671 53807.1 0.5 1310 5053 6361 SUDHL4_400M_050219_2,6365 SUDHL4_400M_050219_2,6365,RMKQVEELY False False RMKQVEELY 31.793987 606.308947741985 590950.0 6361.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1 2.5229918360710144 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6368 31.807 415.0 175770.0 25 0 14223.0 -1 FTNFLYDMLFY 11 74 745.3382599295898 1488.6619669259794 2 745.3392211794853 MULTI CID FTMS 0 0 0 6367 142953.4375 0.2014949664909912 -7 0.2269439697265625 1 Oxidation (M) _FTNFLYDM(Oxidation (M))LFY_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 5.731851221503515 0.8481046878870278 6 HDEAQQNA{M(Oxidation (M))|F}Y 10 -1 65.042 0.0 0.0 4.3692 0.0 0.0 267.15913588691564 0.0 267.15913588691564 0.0 48.052528454327685 0.0 0.0 0 0.8935078169319297 0.0 0.0 1.274227503252014 HDEAQQNA{M(Oxidation (M))|F}Y 4.3692 - 581 1 1.671 57496.5 1.0 1311 5055 6367 SUDHL4_400M_050219_2,6368 SUDHL4_400M_050219_2,6368,FTNFLYDMLFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6369 31.818 628.0 170660.0 25 0 24560.0 + 9471 FLDEKTHEL 9 143 377.86067648581127 1130.560200057634 3 377.8610717654228 MULTI CID FTMS 0 0 0 6367 118844.015625 0.2358013258912129 -8 0.2792491912841797 2 Unmodified _FLDEKTHEL_ ENSG00000129317|ENST00000344862|PUS7L 36.506200033944 0.094635877243972 6 {NN|[MP]|[D{I|L}]|[EV]}[RN]KED{I|L}E 9 7 + 50.302 0.0 0.0 4.4493 4.4493 80.179 0.0 0.0 0.0 2.6760624017703094 25.361753205006607 2.6760624017703094 6.709412807357751 0 0.0 1.0969100130080565 1.25 0.0 {NN|[MP]|[D{I|L}]|[EV]}[RN]KED{I|L}E;{[QN]|[E{I|L}]|[KN]}QQKED{I|L}E;[HT]EKE[{M(Oxidation (M))|F}V]{I|L}E;{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))K]SK[WY];[HT]EKE{I|L}[{M(Oxidation (M))|F}V]E;[VP]{[ES]|[DT]|[{I|L}C]}[{I|L}T]ED{I|L}E;{[ES]|[DT]|[{I|L}C]}[VP][{I|L}T]ED{I|L}E;{M(Oxidation (M))|F}{I|L}[C(Carbamidomethyl (C))K]SK[HD]P;[HT]E{I|L}[SG][{M(Oxidation (M))|F}V]{I|L}E;[HT]E{I|L}[SG]{I|L}[{M(Oxidation (M))|F}V]E 4.4493;3.8558;2.2881;1.9346;1.9124;1.8696;1.6281;1.346;0.81254;0.43685 -;-;-;-;-;-;-;-;-;- 496 1 1.671 89969.2 1.0 1312 5055 6367 SUDHL4_400M_050219_2,6369 SUDHL4_400M_050219_2,6369,FLDEKTHEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6371 31.829 462.0 113820.0 25 0 13390.0 + 42344 VTASAPTSLL 10 87 480.2738368623373 958.5331207914744 2 480.2738830447197 MULTI CID FTMS 0 0 0 6370 116593.765625 0.27054338388455 5 -0.1488990783691406 1 Unmodified _VTASAPTSLL_ ENSG00000169116|ENST00000307428|PARM1 26.88365393820708 0.3646707531412818 6 {[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VAE{I|L}V 9 7 + 59.036 0.0 0.0 6.159 6.159 61.16 0.0 0.0 0.0 3.013514572192875 16.478174818886373 3.013514572192875 0.0 0 0.6694451763165201 2.0 0.0 0.0 {[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VAE{I|L}V;{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VEA{I|L}V;{[TV]|[{I|L}S]}{[SA]|[TG]}AVAE{I|L}V;{[TV]|[{I|L}S]}{[SA]|[TG]}AVEA{I|L}V;{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}AVE{I|L}V;{[TV]|[{I|L}S]}{[SA]|[TG]}AAVE{I|L}V;{[TV]|[{I|L}S]}[QT]VEA{I|L}V;{[TV]|[{I|L}S]}[QT]VAE{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[KA]TEA{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[KA]TAE{I|L}V 6.159;6.159;5.8446;5.8446;5.6613;5.3469;4.7986;4.7986;4.3812;4.3812 -;-;-;-;-;-;-;-;-;- 772 1 1.671 44831.7 1.0 1313 5056 6370 SUDHL4_400M_050219_2,6371 SUDHL4_400M_050219_2,6371,VTASAPTSLL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6372 31.843 800.0 220300.0 25 0 28227.0 + 32457 SAFQEIKNKV 10 148 388.5517892236657 1162.633538271197 3 388.5516235232353 MULTI CID FTMS 0 0 0 6370 103101.7421875 0.9425151061404284 1 -0.0292911529541015 2 Unmodified _SAFQEIKNKV_ REV__ENSG00000164142|ENST00000435205|FHIP1A 8.751783647060863 0.6861543715548071 6 {I|L}KNKV 5 -1 35.745 0.0 0.0 3.0745 0.0 0.0 562.2486828376989 0.0 562.2486828376989 0.0 21.14130335360009 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {I|L}KNKV 3.0745 + + 431 1 1.671 142478.3 0.4799999892711639 1314 5056 6370 SUDHL4_400M_050219_2,6372 SUDHL4_400M_050219_2,6372,SAFQEIKNKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6373 31.848 268.0 380800.0 25 0 105280.0 -1 0 45 1174.7974044333257 3521.3703839001773 3 1175.131762683392 MULTI CID FTMS 0 0 0 6370 713292.8125 0.6609011157393546 2 -0.0885429382324218 3 6 TYN 3 -1 10.445 0.0 0.0 0.29663 0.0 0.0 2470.8720451324025 669.3227633111936 3140.194808443596 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 TYN 0.29663 - 46 + 1 1.671 90621.7 1.0 1315 5056 6370 SUDHL4_400M_050219_2,6373 SUDHL4_400M_050219_2,6373, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6375 31.852 11.0 3726000.0 25 0 600400.0 + 16127 ITSSAVTTALK 11 61 546.3190456511188 1090.6235383690375 2 546.3190185427666 MULTI CID FTMS 0 0 0 6374 4950236.0 0.6439941239313459 2 -0.0950736999511718 1 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 36.39500950444726 0.267929034476522 6 {I|L}TSSAVT[TA]{I|L}K 11 0 + 89.003 0.0 0.0 8.1608 8.1608 96.754 0.0 0.0 0.0 70.15618084197985 5.783960731301676 5.783960731301676 22.316085869055115 0 0.4247425010840047 2.0 0.8494850021680094 0.0 + + {I|L}TSSAVT[TA]{I|L}K;{I|L}TS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}T[TA]{I|L}K 8.1608;6.1146 +;- + 81 + 1 1.658 42865.4 1.0 1316 5057 6374 SUDHL4_400M_050219_2,6375 SUDHL4_400M_050219_2,6375,ITSSAVTTALK False True ITSSAVTTALK 31.852189 546.319018542767 114158592.0 6374.0 chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 9.94000482559204 2.0 True 11.0 False splicing PXD020620_cell_line SUDHL4_400M_050219_2 6376 31.866 800.0 211250.0 25 0 23174.0 + 9472 FLDEKTHEL 9 129 566.2872054447009 1130.5598579562018 2 566.2877685427666 MULTI CID FTMS 0 0 0 6374 184508.84375 0.4542376712387784 -2 0.0499477386474609 2 Unmodified _FLDEKTHEL_ ENSG00000129317|ENST00000344862|PUS7L 63.22749603027936 0.0242951379232427 6 {I|L}{M(Oxidation (M))|F}DEKTHE{I|L} 9 2 + 78.313 0.0 0.0 6.9269 6.9269 81.294 0.0 0.0 0.0 29.3806214913938 14.313912467360405 14.313912467360405 0.7968969065610167 0 1.4916440611282626 0.0 1.9476212463643423 0.0 {I|L}{M(Oxidation (M))|F}DEKTHE{I|L};{M(Oxidation (M))|F}{I|L}DEKTHE{I|L};{I|L}{M(Oxidation (M))|F}D{I|L}[SG]THE{I|L};{I|L}{M(Oxidation (M))|F}EDKTHE{I|L};{M(Oxidation (M))|F}{I|L}D{I|L}[SG]THE{I|L};{M(Oxidation (M))|F}{I|L}EDKTHE{I|L};{I|L}{M(Oxidation (M))|F}{I|L}D[SG]THE{I|L};{M(Oxidation (M))|F}{I|L}{I|L}D[SG]THE{I|L};{I|L}{M(Oxidation (M))|F}EV[SG]THE{I|L};{M(Oxidation (M))|F}{I|L}EV[SG]THE{I|L} 6.9269;6.8564;6.1829;6.1693;6.1124;6.0988;5.5607;5.4902;5.4253;5.3548 -;+;-;-;-;-;-;-;-;- + 3760 + 1 1.658 126679.7 0.75 1317 5057 6374 SUDHL4_400M_050219_2,6376 SUDHL4_400M_050219_2,6376,FLDEKTHEL True True FLDEKTHEL 31.866433 566.287768542767 4384196.625 6374.0 ENSG00000129317|ENST00000344862|PUS7L 4.766444683074951 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6377 31.879 729.0 223000.0 25 0 20643.0 + 6394 DWAKLIKRL 9 161 381.5741023293045 1141.7004775881137 3 381.5739623904228 MULTI CID FTMS 0 0 0 6374 133886.109375 0.401196663601756 -6 0.1757106781005859 3 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 11.494710602746466 0.5255349189887087 6 {M(Oxidation (M))|F}PQK{I|L}K[R{I|L}]{I|L} 9 -1 + 42.757 0.0 0.0 3.745 3.745 80.944 0.0 0.0 0.0 29.99241393575847 0.7914042620327066 0.7914042620327066 9.208187539523747 0 0.0 0.0 0.0 0.805462187404089 {M(Oxidation (M))|F}PQK{I|L}K[R{I|L}]{I|L};{M(Oxidation (M))|F}P[AG]K{I|L}K[R{I|L}]{I|L};[PG]A{M(Oxidation (M))|F}K{I|L}K[R{I|L}]{I|L} 3.745;2.9385;1.5759 -;-;- 81 + 1 1.658 130583.9 1.0 1318 5057 6374 SUDHL4_400M_050219_2,6377 SUDHL4_400M_050219_2,6377,DWAKLIKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6378 31.893 800.0 273820.0 25 0 43285.0 + -1 KEAACSSGVLLEVK 14 181 358.71343488255496 715.41231683191 2 358.7130615115166 MULTI CID FTMS 0 0 0 6374 131778.8125 0.362476794652195 -9 0.2768917083740234 4 nc|ENSG00000134363|P19883-2|FST;ENSG00000134363|ENST00000256759|FST 6 {NN|[MP]|[D{I|L}]|[EV]}{I|L}EVK 6 -1 + 50.337 0.0 0.0 7.036 7.036 85.943 0.0 0.0 0.0 21.14996076598585 3.899803948247929 3.899803948247929 3.899803948247929 0 0.3252574989159953 2.0 0.6747425010840047 0.3851518780601923 {NN|[MP]|[D{I|L}]|[EV]}{I|L}EVK;{NN|[MP]|[D{I|L}]|[EV]}{I|L}EKV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}EV;{[TV]|[{I|L}S]}GV{I|L}EV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}EV 7.036;6.4909;4.6322;2.64;1.3019 -;-;-;-;- 131 + 1 1.658 173718.3 0.5 1319 5057 6374 SUDHL4_400M_050219_2,6378 SUDHL4_400M_050219_2,6378, False False KEAACSSGVLLEVK 31.892878 358.713061511517 392798.9375 6374.0 nc|ENSG00000134363|P19883-2|FST;;ENSG00000134363|ENST00000256759|FST 0.1582406510909398 4.0 False 14.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6379 31.907 800.0 167470.0 25 0 19080.0 -1 0 138 514.2297319414552 513.2224554748551 1 514.2295410037041 MULTI CID FTMS 0 0 0 6374 91310.9375 0.1920386839039122 8 -0.1398506164550781 5 6 {[QG]|[NA]}{M(Oxidation (M))|F}Y 4 -1 + 44.442 0.0 0.0 8.6594 8.6594 96.934 0.0 0.0 0.0 9.259687322722812 9.259687322722812 9.259687322722812 19.20818753952375 0 0.6989700043360187 1.2218487496163564 0.0 0.3807196863200844 {[QG]|[NA]}{M(Oxidation (M))|F}Y;{[QG]|[NA]}Y{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}NY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}GY;{[MS]|[{M(Oxidation (M))|F}A]}GGY 8.6594;4.9168;4.6347;2.1487;1.999 -;-;-;-;- 80 1 1.658 104188.9 0.5299999713897705 1320 5057 6374 SUDHL4_400M_050219_2,6379 SUDHL4_400M_050219_2,6379, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6381 31.915 224.0 199910.0 25 0 10975.0 -1 NMVAKVDEV 9 92 510.75493577791656 1019.4953186226332 2 510.7552978396416 MULTI CID FTMS 0 0 0 6380 258835.5625 0.2878391330426702 5 -0.0684375762939453 1 Oxidation (M) _NM(Oxidation (M))VAKVDEV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 26.268140514670165 0.1969607489560049 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V{M(Oxidation (M))|F}DVVAG 9 -1 41.38 0.0 0.0 4.0589 0.0 0.0 0.0 68.05139337711171 68.05139337711171 25.8952573376692 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V{M(Oxidation (M))|F}DVVAG 4.0589 - 327 + 1 1.658 40015.6 1.0 1321 5058 6380 SUDHL4_400M_050219_2,6381 SUDHL4_400M_050219_2,6381,NMVAKVDEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6382 31.926 639.0 146110.0 25 0 19393.0 + 23866 LVKREDYLY 9 133 400.219172465575 1197.635687996925 3 400.2209655642509 MULTI CID FTMS 0 0 0 6380 71424.953125 0.7316670950946965 1 -0.0358219146728515 2 Unmodified _LVKREDYLY_ ENSG00000151366|ENST00000281031|NDUFC2;nc|ENSG00000259112|E9PQ53|NDUFC2-KCTD14 15.248480904072842 0.4239247793462406 6 KY{I|L}V{I|L}Y 6 6 22.083 0.0 0.0 1.8439 0.0 0.0 400.1683521955094 0.0 400.1683521955094 0.0 6.598878259206842 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.0 KY{I|L}V{I|L}Y 1.8439 - 85 1 1.658 74972.3 1.0 1322 5058 6380 SUDHL4_400M_050219_2,6382 SUDHL4_400M_050219_2,6382,LVKREDYLY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6383 31.935 513.0 203020.0 25 0 44859.0 + 18681 ALSDSIHTV 9 106 471.7485466846789 941.4825404361576 2 471.7485229372978 MULTI CID FTMS 0 0 0 6380 150611.421875 0.8089218868511656 -7 0.2349624633789062 3 Unmodified _LAISSDSHL_ ENSG00000110851|ENST00000228437|PRDM4 44.40701690623563 0.0526327925666318 6 [{I|L}A]{[WT]|[RM]}DHS{I|L} 8 5 + 46.13 0.0 0.0 4.8997 4.8997 75.915 0.0 0.0 0.0 14.378297343330082 1.383026981662816 1.383026981662816 1.383026981662816 0 0.9247425010840048 2.0 1.3851518780601924 0.0 [{I|L}A]{[WT]|[RM]}DHS{I|L};[{I|L}A]{[WT]|[RM]}DHTV;[{I|L}A]SD{[TV]|[{I|L}S]}HS{I|L};[{I|L}A]SD{[TV]|[{I|L}S]}HTV;[{I|L}A]{[WT]|[RM]}[HM]A{I|L};{[TV]|[{I|L}S]}HDSTVA{I|L};[HT]VDSTVA{I|L};{[TV]|[{I|L}S]}HDTSVA{I|L};[HT]VDTSVA{I|L};[{I|L}A][{M(Oxidation (M))|F}V]{[CA]|SS}[YR] 4.8997;4.7528;4.0541;3.9072;3.4345;3.3639;3.2124;2.5374;2.3859;2.3814 -;-;-;-;-;-;-;-;-;- 397 + 1 1.658 85294.9 1.0 1323 5058 6380 SUDHL4_400M_050219_2,6383 SUDHL4_400M_050219_2,6383,LAISSDSHL True False ALSDSIHTV 31.934911 471.748522937298 770367.0625 6380.0 ENSG00000110851|ENST00000228437|PRDM4 6.248994509379069 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6384 31.942 423.0 211480.0 25 0 15524.0 + 1287 AIQEQITRV 9 115 529.3035952191681 1056.592637505136 2 529.3038818240166 MULTI CID FTMS 0 0 0 6380 119199.9140625 0.6853385963916206 -7 0.2349624633789062 4 Unmodified _AIQEQITRV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1 55.50274090549119 0.0285720310785888 6 [{I|L}A]QEQ{I|L}TRV 9 0 + 76.93 0.0 0.0 7.281 7.281 86.69 0.0 0.0 0.0 51.98194147242592 8.967009365564877 8.967009365564877 4.247425010840033 0 1.424742501084005 2.0 0.9247425010840048 0.7742275032520141 + + [{I|L}A]QEQ{I|L}TRV;[{I|L}A]QAW{I|L}TRV;[{I|L}A][AG]EQ{I|L}TRV;[{I|L}A]QE[AG]{I|L}TRV;[{I|L}A][AG]AW{I|L}TRV;[{I|L}A]QA{[DA]|[EG]}{I|L}TRV;[{I|L}A]QE[WR]RV;[{I|L}A][AG]E[AG]{I|L}TRV;[{I|L}A][AG]A{[DA]|[EG]}{I|L}TRV;[{I|L}A][AG]E[WR]RV 7.281;6.879;6.4095;6.4095;6.0075;6.0075;5.8397;5.5421;5.1401;4.9631 +;-;-;-;-;-;-;-;-;- + 398 + 1 1.658 72509.0 1.0 1324 5058 6380 SUDHL4_400M_050219_2,6384 SUDHL4_400M_050219_2,6384,AIQEQITRV True True AIQEQITRV 31.942463 529.303881824017 778860.375 6380.0 ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 4.9781514803568525 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6386 31.948 136.0 371990.0 25 0 32104.0 15653 IQLGSAAFF 9 89 477.2562180950675 952.497883256935 2 477.2559081912041 MULTI CID FTMS 0 0 0 6385 316323.3125 0.2860554622291397 4 -0.0326156616210937 1 Unmodified _IQLGSAAFF_ ENSG00000183303|ENST00000329434|OR5P2 28.486842064014134 0.1687311288560894 6 [Q{I|L}]{I|L}G 4 5 34.935 0.0 0.0 3.6677 0.0 0.0 0.0 538.2255343072874 538.2255343072874 23.697887582883936 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 + [Q{I|L}]{I|L}G 3.6677 + + 143 + 1 1.658 44008.9 1.0 1325 5059 6385 SUDHL4_400M_050219_2,6386 SUDHL4_400M_050219_2,6386,IQLGSAAFF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6387 31.955 433.0 205730.0 25 0 15242.0 + 31579 RQPDSPTALY 10 103 574.2899221200755 1146.565291306951 2 574.2885009646416 MULTI CID FTMS 0 0 0 6385 140469.640625 0.3630716767601837 -10 0.3354854583740234 2 Unmodified _RQPDSPTALY_ ENSG00000132382|ENST00000254718|MYBBP1A;ENST00000574547.5_1_17:4442712-4447986:-|nuORF;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 34.93206674587334 0.2110832994570416 6 QS[TP]A{I|L}Y 7 3 37.496 0.0 0.0 3.2703 0.0 0.0 368.1721363751969 0.0 368.1721363751969 0.0 30.50652897322905 0.0 0.0 0 1.0 0.0 0.8807196863200843 0.0 QS[TP]A{I|L}Y 3.2703 - 209 1 1.658 71568.4 1.0 1326 5059 6385 SUDHL4_400M_050219_2,6387 SUDHL4_400M_050219_2,6387,RQPDSPTALY False True RQPDSPTALY 31.95548 574.288500964642 4990580.0 6385.0 ENST00000574547.5_1_17:4442712-4447986:-|nuORF;;ENSG00000132382|ENST00000254718|MYBBP1A;;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 8.005497773488363 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6388 31.963 421.0 186530.0 25 0 22897.0 + 39472 VAQEPVNTL 9 108 485.7641357090065 969.513718484813 2 485.7632018923759 MULTI CID FTMS 0 0 0 6385 85984.875 0.6705273039677062 -3 0.1243648529052734 3 Unmodified _VAQEPVNTL_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 43.85829265575387 0.0542763391141878 6 [{I|L}T]NR 4 8 36.042 0.0 0.0 3.7175 0.0 0.0 0.0 482.2227083131912 482.2227083131912 12.98242679469319 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.5891368308784531 0.2742275032520141 [{I|L}T]NR 3.7175 - 310 1 1.658 64697.2 1.0 1327 5059 6385 SUDHL4_400M_050219_2,6388 SUDHL4_400M_050219_2,6388,VAQEPVNTL True True VAQEPVNTL 31.962978 485.763201892376 538874.9375 6385.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 4.950234810511272 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6393 31.983 305.0 165900.0 25 0 22964.0 23861 LVKGRAGP 8 75 399.2520482320572 796.4895435309145 2 399.2520934939384 MULTI CID FTMS 0 0 0 6392 76133.21875 0.7842682976784897 1 -0.0081157684326171 1 Unmodified _LVKGRAGP_ ENSG00000103056|ENST00000219334|SMPD3;nc|ENSG00000103056|Q9NY59-2|SMPD3 2.302733041254933 0.8103549651115762 6 Y 1 8 13.099 0.0 0.0 1.6446 0.0 0.0 615.4151702172411 0.0 615.4151702172411 0.0 3.345033904792878 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.6446 - 3 + 1 1.658 44656.7 1.0 1328 5063 6392 SUDHL4_400M_050219_2,6393 SUDHL4_400M_050219_2,6393,LVKGRAGP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6397 32.002 433.0 309360.0 25 0 218380.0 -1 0 54 525.2876237910065 524.2803473244064 1 525.2883788943291 MULTI CID FTMS 0 0 0 6396 155755.03125 0.270980905053511 9 -0.3464298248291015 1 6 Y 1 -1 5.4846 0.0 0.0 1.0461 0.0 0.0 276.1272996943267 82.0667971246703 358.194096818997 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0461 - 4 + 1 1.658 111069.0 1.0 1329 5066 6396 SUDHL4_400M_050219_2,6397 SUDHL4_400M_050219_2,6397, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6398 32.015 800.0 80792.0 25 0 7106.4 -1 ENRQYRMHSLQ 11 84 739.354889938977 1476.6952269447538 2 739.3549682497978 MULTI CID FTMS 0 0 0 6396 114524.3359375 0.640096111037268 -3 0.0162239074707031 2 Oxidation (M) _ENRQYRM(Oxidation (M))HSLQ_ ENSG00000149260|ENST00000648180|CAPN5;ENST00000527129.1_1_11:76831698-76834913:+|nuORF 15.248480904072842 0.7179608125786238 6 {[QV]|[N{I|L}]|[RA]|[KV]}NAYY{[MG]|[TS]}G{M(Oxidation (M))|F}{I|L}QS 13 -1 + 83.109 0.0 0.0 5.628 5.628 91.267 0.0 0.0 0.0 23.16843489530629 46.29821302443257 23.16843489530629 28.84643433451713 0 2.1791746928241125 2.0 0.0 1.7104093769761874 {[QV]|[N{I|L}]|[RA]|[KV]}NAYY{[MG]|[TS]}G{M(Oxidation (M))|F}{I|L}QS;{[QV]|[N{I|L}]|[RA]|[KV]}NAYY{[MG]|[TS]}GRS[MT];{[QV]|[N{I|L}]|[RA]|[KV]}NAYY[MN]RS[MT] 5.628;3.6746;3.4286 -;-;- 227 1 1.658 52216.3 0.5 1330 5066 6396 SUDHL4_400M_050219_2,6398 SUDHL4_400M_050219_2,6398,ENRQYRMHSLQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6399 32.029 800.0 141760.0 25 0 16935.0 + 11559 GIVRKAAY 8 131 439.266509429665 876.51846592613 2 439.2664977908134 MULTI CID FTMS 0 0 0 6396 96488.984375 0.0291210752230431 151 -3.592905044555664 3 Unmodified _GIVRKAAY_ REV__ENSG00000136813|ENST00000684092|ECPAS;REV__nc|ENSG00000136813|Q5VYK3|ECPAS 20.871210003555333 0.6025813472596342 6 {[VA]|[{I|L}G]}PPA 5 -1 38.768 0.0 0.0 4.4229 0.0 0.0 0.0 438.2477030078378 438.2477030078378 27.347976110058543 0.0 0.0 0.0 0 0.3054621874040891 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}PPA 4.4229 - 77 + 1 1.658 88546.9 0.8600000143051147 1331 5066 6396 SUDHL4_400M_050219_2,6399 SUDHL4_400M_050219_2,6399,GIVRKAAY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6402 32.04 240.0 297170.0 25 0 17704.0 + 31203 RLQEEINEV 9 105 565.295960094607 1128.577367256014 2 565.2960082888603 MULTI CID FTMS 0 0 0 6401 204145.265625 0.9605114171444854 -1 0.0038871765136718 1 Unmodified _RLQEEINEV_ nc|ENSG00000166130|Q70UQ0-2|IKBIP;nc|ENSG00000166130|Q70UQ0|IKBIP 55.50274090549119 0.0285720310785888 6 [R{I|L}]QEE{I|L}NEV 9 0 + 60.784 0.0 0.0 5.3859 5.3859 86.305 0.0 0.0 0.0 2.922152515121226 43.24514892672019 2.922152515121226 9.208187539523747 0 0.6139829889124311 0.0 0.6505149978319906 0.6747425010840047 + + [R{I|L}]QEE{I|L}NEV;[R{I|L}][AG]EE{I|L}NEV;[R{I|L}]QEE{I|L}GGEV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{[VA]|[{I|L}G]}E{I|L}NEV;{NN|[MP]|[D{I|L}]|[EV]}DRR{I|L}NEV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}[W{I|L}]{I|L}NEV;{NN|[MP]|[D{I|L}]|[EV]}Q[W{I|L}]{I|L}NEV;[R{I|L}]QEEVQEV;{[QV]|[N{I|L}]|[RA]|[KV]}[W{I|L}]E{I|L}NEV;{[QV]|[N{I|L}]|[RA]|[KV]}E{[VA]|[{I|L}G]}E{I|L}NEV 5.3859;4.57;4.57;4.5163;4.432;4.2042;4.0506;4.0417;3.9398;3.8291 +;-;-;-;-;-;-;-;-;- + 1747 1 1.658 55895.4 1.0 1332 5068 6401 SUDHL4_400M_050219_2,6402 SUDHL4_400M_050219_2,6402,RLQEEINEV True True RLQEEINEV 32.040173 565.29600828886 1260602.625 6401.0 nc|ENSG00000166130|Q70UQ0-2|IKBIP;;nc|ENSG00000166130|Q70UQ0|IKBIP 5.179983297983806 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 6403 32.054 800.0 73662.0 25 0 7516.6 + 13226 HHADNMQKMFY 11 99 711.3066540099268 1420.5987550866537 2 711.3079101443291 MULTI CID FTMS 0 0 0 6401 87105.9921875 0.6542257052504268 -6 0.0620746612548828 2 Unmodified _HHADNMQKMFY_ REV__ENSG00000121879|ENST00000263967|PIK3CA 12.240655878213236 0.7805268987462184 6 [AG]AHDEAQQNA{M(Oxidation (M))|F}Y 13 -1 + 64.241 0.0 0.0 4.5221 4.5221 72.994 0.0 0.0 0.0 3.217852172546003 10.696083918116416 3.217852172546003 0.3218468337140123 0 0.8182503180159344 1.0 0.0 0.4247425010840047 [AG]AHDEAQQNA{M(Oxidation (M))|F}Y;[AG]AHDEAGAQNA{M(Oxidation (M))|F}Y;[AG]AHDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAQQNA{M(Oxidation (M))|F}Y;[AG]AHDEAGANQA{M(Oxidation (M))|F}Y;[QA]HDEAGAQNA{M(Oxidation (M))|F}Y;[QA]HDEAQNQA{M(Oxidation (M))|F}Y;[QA]HDEAGANQA{M(Oxidation (M))|F}Y;[AG]AHDEQAQNA{M(Oxidation (M))|F}Y;[AG]AHDEAQ[AG]NA{M(Oxidation (M))|F}Y 4.5221;4.4995;4.3102;4.2956;4.2876;4.2712;4.0837;4.0593;4.0301;3.8835 -;-;-;-;-;-;-;-;-;- 3343 1 1.658 50763.6 0.4799999892711639 1333 5068 6401 SUDHL4_400M_050219_2,6403 SUDHL4_400M_050219_2,6403,HHADNMQKMFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6405 32.059 106.0 554780.0 25 0 51176.0 -1 FTNFLYDMLFY 11 55 745.3382599295898 1488.6619669259794 2 745.3389160037041 MULTI CID FTMS 0 0 0 6404 456162.03125 0.6429670724160182 7 -0.3263320922851562 1 Oxidation (M) _FTNFLYDM(Oxidation (M))LFY_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4-5|ABCA13;nc|ENSG00000179869|Q86UQ4-6|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 5.731851221503515 0.8481046878870278 6 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 60.851 0.0 0.0 4.0877 0.0 0.0 404.2178822248063 0.0 404.2178822248063 0.0 39.463950151760656 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.8494850021680094 DEAQQNA{M(Oxidation (M))|F}Y 4.0877 - 205 1 1.658 46989.2 1.0 1334 5069 6404 SUDHL4_400M_050219_2,6405 SUDHL4_400M_050219_2,6405,FTNFLYDMLFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6406 32.068 526.0 165430.0 25 0 22851.0 + 17409 KMPEINAKV 9 128 523.288989124056 1044.563425314912 2 523.2885619997978 MULTI CID FTMS 0 0 0 6404 154928.078125 0.9256968285486727 -2 0.0247650146484375 2 Oxidation (M) _KM(Oxidation (M))PEINAKV_ ENSG00000051108|ENST00000439977|HERPUD1;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;ENST00000569569.5_1_16:56966069-56970730:+|nuORF;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1 47.594388314883695 0.0456443387682827 6 [EP]{I|L}NAK{M(Oxidation (M))|F} 7 3 37.635 0.0 0.0 3.6029 0.0 0.0 0.0 242.15098569993063 242.15098569993063 12.201972054372597 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 1.0138793319624575 [EP]{I|L}NAK{M(Oxidation (M))|F} 3.6029 - 822 1 1.658 69452.2 1.0 1335 5069 6404 SUDHL4_400M_050219_2,6406 SUDHL4_400M_050219_2,6406,KMPEINAKV True False KMPEINAKV 32.068098 523.288561999798 1389844.875 6404.0 nc|ENSG00000051108|Q15011-2|HERPUD1;;ENST00000570273.5_1_16:56966069-56976120:+|nuORF;;nc|ENSG00000051108|Q15011-3|HERPUD1;;ENSG00000051108|ENST00000439977|HERPUD1;;ENST00000568676.5_1_16:56966069-56969519:+|nuORF;;ENST00000569569.5_1_16:56966069-56970730:+|nuORF 9.008695920308432 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6407 32.07 107.0 565150.0 25 0 42333.0 + 44218 YLGRLAHEV 9 78 529.2927775695491 1056.571002205898 2 529.2916137576103 MULTI CID FTMS 0 0 0 6404 359856.15625 0.7355755509376333 -1 0.0208778381347656 3 Unmodified _YLGRLAHEV_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000425147.1_1_21:26734448-26734742:+|nuORF 38.17557092003332 0.0854718145212029 6 [{I|L}A]QEQ{I|L}KEV 9 6 + 46.397 0.0 0.0 4.3913 4.3913 72.609 0.0 0.0 0.0 0.2140746052526054 8.325141431248568 0.2140746052526054 0.2140746052526054 0 0.9247425010840048 1.3979400086720375 0.5 0.0 [{I|L}A]QEQ{I|L}KEV;V{M(Oxidation (M))|F}HW{I|L}KEV;[{I|L}A]QA{[DA]|[EG]}{I|L}KEV;[Y{I|L}]{[NV]|[RG]}[{I|L}A]HEV;[PS]QAW{I|L}KEV;[{I|L}A][AG]EQ{I|L}KEV;[{I|L}A]QE[AG]{I|L}KEV;V{M(Oxidation (M))|F}H{[DA]|[EG]}{I|L}KEV;[{I|L}A][AG]A{[DA]|[EG]}{I|L}KEV;[PS][AG]AW{I|L}KEV 4.3913;4.371;3.993;3.6033;3.5414;3.5197;3.5197;3.4944;3.1256;2.6699 -;-;-;+;-;-;-;-;-;- + 198 + 1 1.658 52527.0 1.0 1336 5069 6404 SUDHL4_400M_050219_2,6407 SUDHL4_400M_050219_2,6407,YLGRLAHEV True True YLGRLAHEV 32.070375 529.29161375761 2281636.5 6404.0 ENST00000425147.1_1_21:26734448-26734742:+|nuORF;;ENSG00000142541|ENST00000391857|RPL13A 5.650793552398682 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6408 32.081 626.0 375350.0 25 0 92100.0 19669 LGKVVQVY 8 131 453.2760685847744 904.5375842363488 2 453.2764770388603 MULTI CID FTMS 0 0 0 6404 196440.453125 0.947519284538733 -1 0.0208778381347656 4 Unmodified _LGKVVQVY_ ENST00000495104.1_1_4:165841962-165842070:-|nuORF 38.15118350030904 0.2652218139009398 6 {[QV]|[N{I|L}]|[RA]|[KV]}V[KG]{I|L}VY 8 5 + 38.152 0.0 0.0 4.2179 4.2179 77.042 0.0 0.0 0.0 2.274132665840334 21.9546079585216 2.274132665840334 3.64699075533359 0 0.8807196863200843 0.721246399047171 0.0 0.6549471895720985 {[QV]|[N{I|L}]|[RA]|[KV]}V[KG]{I|L}VY;VV[KA]N{I|L}VY;VVQ[KG]{I|L}VY;{[QV]|[N{I|L}]|[RA]|[KV]}VV[KA]VY;VV[KA]VQVY;[KG][{I|L}V]N{I|L}VY;VV[KG]Q{I|L}VY;{[VA]|[{I|L}G]}GV[KG]{I|L}VY;VVQV[KA]VY;{[QV]|[N{I|L}]|[RA]|[KV]}V[KG]V{I|L}Y 4.2179;3.8147;3.8147;3.429;3.3169;3.3134;3.2872;3.2861;3.0258;2.9226 -;-;-;-;-;-;-;-;-;- 606 1 1.658 183819.2 1.0 1337 5069 6404 SUDHL4_400M_050219_2,6408 SUDHL4_400M_050219_2,6408,LGKVVQVY False True IGKVVQVY 32.081294 453.27647703886 939825.4375 6404.0 ENSG00000161970|ENST00000648839|RPL26;;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;;ENSG00000037241|ENST00000265100|RPL26L1 4.002818902333577 2.0 False 8.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6409 32.09 493.0 166480.0 25 0 23682.0 + 8954 FANDANKVL 9 101 496.2637205810372 990.5128882288744 2 496.2638122439384 MULTI CID FTMS 0 0 0 6404 144955.625 0.5638905821928528 -2 0.0247650146484375 5 Unmodified _FANDANKVL_ ENSG00000123104|ENST00000381340|ITPR2 39.94969957227396 0.0757326808254658 6 [DN]ANKVA{M(Oxidation (M))|F}{I|L} 9 4 + 43.307 0.0 0.0 4.3722 4.3722 82.86 0.0 0.0 0.0 14.168601844338037 9.889917747712644 9.889917747712644 9.208187539523747 0 0.2742275032520141 0.8860566476931632 0.3807196863200844 0.6505149978319906 [DN]ANKVA{M(Oxidation (M))|F}{I|L};[DN]AGGKVA{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}VADNA{M(Oxidation (M))|F}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}DNANKV{I|L};{[QN]|[E{I|L}]|[KN]}VADGGA{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}V{[WN]|[YH]}A{M(Oxidation (M))|F}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}DGGANKV{I|L};{[MS]|[{M(Oxidation (M))|F}A]}DNAGGKV{I|L};{[QN]|[E{I|L}]|[KN]}{[CP]|[EA]}AQA{M(Oxidation (M))|F}{I|L};[TA]VQQNA{M(Oxidation (M))|F}{I|L} 4.3722;3.4426;2.9418;2.6409;2.0121;1.9659;1.7113;1.7113;1.2317;1.169 -;-;-;-;-;-;-;-;-;- 406 1 1.658 65627.6 1.0 1338 5069 6404 SUDHL4_400M_050219_2,6409 SUDHL4_400M_050219_2,6409,FANDANKVL True True FANDANKVL 32.089985 496.263812243938 1310255.875 6404.0 ENSG00000123104|ENST00000381340|ITPR2 5.239171504974365 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6411 32.105 643.0 122950.0 25 0 11457.0 + 18020 KSFGSAQEF 9 119 500.74018838859934 999.4658238439988 2 500.7394286990166 MULTI CID FTMS 0 0 0 6410 51283.78125 0.5477734783075636 5 -0.2477645874023437 1 Unmodified _KSFGSAQEF_ ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2 9.38312468134398 0.5871240394367778 6 QE{M(Oxidation (M))|F} 3 6 28.812 0.0 0.0 2.8828 0.0 0.0 577.2880116193375 0.0 577.2880116193375 0.0 17.703037561203843 0.0 0.0 0 0.5 0.0 0.0 0.0 + QE{M(Oxidation (M))|F} 2.8828 + + 122 1 1.658 65354.8 1.0 1339 5070 6410 SUDHL4_400M_050219_2,6411 SUDHL4_400M_050219_2,6411,KSFGSAQEF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6412 32.119 800.0 215690.0 25 0 15935.0 + 29827 QQIGKVVQV 9 166 499.80329092228095 997.592028911362 2 499.8038818240166 MULTI CID FTMS 0 0 0 6410 109381.375 0.2927025398158874 -2 0.056854248046875 2 Unmodified _QQLGKVVQV_ ENSG00000161970|ENST00000648839|RPL26;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;ENSG00000037241|ENST00000265100|RPL26L1 48.345845343767074 0.0439967357579942 6 [AG]VV[KG]{I|L}QQV 10 6 + 17.946 0.0 0.0 1.7989 1.7989 70.802 0.0 0.0 0.0 0.956153041067374 0.956153041067374 0.956153041067374 2.3957751657678763 0 0.468765315847925 1.5228787452803376 0.0 0.25 [AG]VV[KG]{I|L}QQV;[KG]{I|L}VVQQQV;[KG]{I|L}VN{I|L}QQV;VV[KA]VQQQV;VV[KA]N{I|L}QQV;{[QV]|[N{I|L}]|[RA]|[KV]}V[KG]{I|L}QQV;VV[KG]{I|L}QQQV;VV[KG]Q{I|L}QQV;{[VA]|[{I|L}G]}KVVQQQV;{[VA]|[{I|L}G]}KVN{I|L}QQV 1.7989;1.5588;1.4794;1.0983;1.0189;1.0175;0.97302;0.89365;0.84103;0.76166 -;-;-;-;-;-;-;-;-;- 1676 1 1.658 131593.9 0.4900000095367431 1340 5070 6410 SUDHL4_400M_050219_2,6412 SUDHL4_400M_050219_2,6412,QQLGKVVQV True True QQIGKVVQV 32.118881 499.803881824017 1627151.25 6410.0 ENSG00000161970|ENST00000648839|RPL26;;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;;ENSG00000037241|ENST00000265100|RPL26L1 5.119424661000569 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6413 32.133 800.0 140800.0 25 0 17245.0 + + 1754 RLQDAIAKV 9 121 507.3104234452284 1012.6062939572568 2 507.3076660037041 MULTI CID FTMS 0 0 0 6410 100786.1484375 0.6821903973835621 1 -0.0565681457519531 3 Unmodified _ALRDQIAKV_ nc|ENSG00000100014|Q69YQ0-2|SPECC1L;ENSG00000100014|ENST00000314328|SPECC1L 29.081581746732265 0.1611639662936252 6 {[QV]|[N{I|L}]|[RA]|[KV]}AER{I|L}A 7 -1 45.75 0.0 0.0 4.518 0.0 0.0 0.0 242.1552414248246 242.1552414248246 33.03305183679903 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}AER{I|L}A 4.518 - 992 1 1.658 88815.3 0.4900000095367431 1341 5070 6410 SUDHL4_400M_050219_2,6413 SUDHL4_400M_050219_2,6413,ALRDQIAKV False False RLQDAIAKV 32.132696 507.307666003704 577311.125 6410.0 nc|ENSG00000100014|Q69YQ0-2|SPECC1L;;ENSG00000100014|ENST00000314328|SPECC1L 3.5052690505981445 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6414 32.147 800.0 87500.0 25 0 12339.0 + 45216 YQYLEQSKY 9 106 611.292439170652 1220.5703254081038 2 611.2928344607353 MULTI CID FTMS 0 0 0 6410 91490.6015625 1.0 0 0.0 4 Unmodified _YQYLEQSKY_ ENSG00000137692|ENST00000260247|DCUN1D5;ENST00000529281.5_1_11:102933090-102962462:-|nuORF;ENST00000531571.5_1_11:102933090-102962381:-|nuORF 66.45667989310934 0.0225072657982126 6 [YQ]Y{I|L}EQSKY 9 0 + 75.281 0.0 0.0 6.1677 6.1677 88.786 0.0 0.0 0.0 39.866822491002885 13.46787486224656 13.46787486224656 9.208187539523747 0 1.0 1.0969100130080565 0.7134679910804405 0.7614393726401688 + + [YQ]Y{I|L}EQSKY;[YQ]Y{I|L}E[AG]SKY;[YQ]YR[DV]SKY;[YQ]YRRY{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]YRR{[WS]|[C(Carbamidomethyl (C)){I|L}]}Y;[YQ]Y{I|L}E[VP]{M(Oxidation (M))|F}Y;[Y{I|L}]ET{M(Oxidation (M))|F}{I|L}Y{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]Y[VG][DV]SKY;[YQ]Y[VG]RY{[WS]|[C(Carbamidomethyl (C)){I|L}]};[YQ]YR[VG]Y{[WS]|[C(Carbamidomethyl (C)){I|L}]} 6.1677;5.4133;4.4518;4.335;4.2513;4.1201;3.7428;3.6974;3.5761;3.5761 +;-;-;-;-;-;-;-;-;- + 841 + 1 1.658 55810.8 0.4799999892711639 1342 5070 6410 SUDHL4_400M_050219_2,6414 SUDHL4_400M_050219_2,6414,YQYLEQSKY True True YQYLEQSKY 32.14655 611.292834460735 445696.0625 6410.0 ENST00000531571.5_1_11:102933090-102962381:-|nuORF;;ENST00000529281.5_1_11:102933090-102962462:-|nuORF;;ENSG00000137692|ENST00000260247|DCUN1D5 7.970199902852376 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6416 32.156 369.0 169560.0 25 0 20992.0 + 16128 ITSSAVTTALK 11 93 546.3190456511188 1090.6235383690375 2 546.3189575076103 MULTI CID FTMS 0 0 0 6415 168985.328125 0.0219839131595161 16 -0.3998146057128906 1 Unmodified _ITSSAVTTALK_ chr11:33881887-33891795|33|39.79|0.15|8.08|-|2|LMO2,LMO2|1 29.28111348798908 0.4046731465847057 6 {I|L}TSSAVTTA{I|L}K 11 0 + 94.7 0.0 0.0 8.6831 8.6831 97.338 0.0 0.0 0.0 87.2523237739733 11.57577319177794 11.57577319177794 22.31608586905513 0 0.4247425010840047 2.0 0.0 0.0 + + {I|L}TSSAVTTA{I|L}K;{I|L}TS{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TTA{I|L}K 8.6831;6.6369 +;- + 146 + 1 1.658 52763.9 1.0 1343 5071 6415 SUDHL4_400M_050219_2,6416 SUDHL4_400M_050219_2,6416,ITSSAVTTALK False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 6417 32.164 442.0 212970.0 25 0 34467.0 + 37437 TLDEYTTRV 9 121 549.2777928259134 1096.5410327186266 2 549.2781860232353 MULTI CID FTMS 0 0 0 6415 107918.359375 0.6590490129162356 -1 0.0565681457519531 2 Unmodified _TLDEYTTRV_ ENSG00000106459|ENST00000393232|NRF1;nc|ENSG00000106459|Q16656-2|NRF1;nc|ENSG00000106459|Q16656-4|NRF1 34.93206674587334 0.1032771302489716 6 [{I|L}T]DEYTTRV 9 0 + 74.191 0.0 0.0 6.7659 6.7659 93.911 0.0 0.0 0.0 60.16765926813832 12.007499097191284 12.007499097191284 21.760912590556813 0 0.9247425010840048 2.0 0.6861818737241735 0.0 + + [{I|L}T]DEYTTRV;[{I|L}T]DEV{[YC]|[HE]}RV;[{I|L}T]V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AHHSV;[{I|L}T][PG]YSHHSV;[{I|L}T][W{M(Oxidation (M))|F}]AHHSV;[{I|L}T]V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{M(Oxidation (M))|F}E]RV;[{I|L}T]V{[MS]|[{M(Oxidation (M))|F}A]}SHHSV;[KA][Y{I|L}]YEDPV;[K{I|L}]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YEDPV;[{I|L}T][W{M(Oxidation (M))|F}][{M(Oxidation (M))|F}E]RV 6.7659;4.7814;3.4568;3.2793;3.1356;3.0867;2.9606;2.8663;2.8663;2.7704 +;-;-;-;-;-;-;-;-;- + 537 + 1 1.658 76226.4 1.0 1344 5071 6415 SUDHL4_400M_050219_2,6417 SUDHL4_400M_050219_2,6417,TLDEYTTRV True True TLDEYTTRV 32.163602 549.278186023235 703869.4375 6415.0 nc|ENSG00000106459|Q16656-4|NRF1;;nc|ENSG00000106459|Q16656-2|NRF1;;ENSG00000106459|ENST00000393232|NRF1 5.175744374593099 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6418 32.175 650.0 163150.0 25 0 12009.0 26292 NQVEALNNL 9 132 507.76420897564 1013.51386501808 2 507.7642700076103 MULTI CID FTMS 0 0 0 6415 100771.4921875 0.2305418329171263 -2 0.0925445556640625 3 Unmodified _NQVEALNNL_ ENSG00000115760|ENST00000421745|BIRC6 74.92900055777586 0.0191935851694334 6 [{I|L}A]NGD{I|L}A{I|L}{NN|[MP]|[D{I|L}]|[EV]} 10 6 + 59.447 0.0 0.0 5.8654 5.8654 81.956 0.0 0.0 0.0 4.075221787320515 7.269987279362624 4.075221787320515 3.133345013315264 0 0.3494850021680094 2.0 0.2742275032520141 1.035666875892183 [{I|L}A]NGD{I|L}A{I|L}{NN|[MP]|[D{I|L}]|[EV]};[{I|L}A]NGDA{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[{I|L}A]NEN{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}DQ{I|L}A{I|L}{NN|[MP]|[D{I|L}]|[EV]};[{I|L}A]NGD{I|L}{I|L}A{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}EN{I|L}A{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}AGD{I|L}A{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}NE{I|L}A{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}DQA{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QV]|[N{I|L}]|[RA]|[KV]}ENA{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 5.8654;5.5563;5.4763;5.4634;5.442;5.4123;5.2714;5.2236;5.1542;5.1031 -;-;-;-;-;-;-;-;-;- 2843 1 1.658 83231.0 1.0 1345 5071 6415 SUDHL4_400M_050219_2,6418 SUDHL4_400M_050219_2,6418,NQVEALNNL True True ALNENINQV 32.174918 507.76427000761 3505390.0 6415.0 ENSG00000125779|ENST00000610179|PANK2;;nc|ENSG00000125779|Q9BZ23-2|PANK2;;nc|ENSG00000125779|Q9BZ23-3|PANK2;;nc|ENSG00000125779|Q9BZ23|PANK2 6.492839177449544 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6419 32.189 800.0 114790.0 25 0 9412.2 + 33982 SLIKETTTGY 10 110 556.7946263373728 1111.5746997415456 2 556.7956420779228 MULTI CID FTMS 0 0 0 6415 96233.2421875 0.8419530067399412 -1 0.0565681457519531 4 Unmodified _SLIKETTTGY_ nc|ENSG00000120802|P42166|TMPO 38.61474834105838 0.1721950110283317 6 {[TV]|[{I|L}S]}{I|L}[HT]K{[HG]|PP}GY 10 5 + 41.967 0.0 0.0 3.7755 3.7755 76.909 0.0 0.0 0.0 12.286881741466615 3.767507096020992 3.767507096020992 5.147767515346132 0 0.7742275032520141 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}[HT]K{[HG]|PP}GY;{[TV]|[{I|L}S]}{I|L}[HT]KWMP;{[TV]|[{I|L}S]}{I|L}[HT]K[HN]Y;{[TV]|[{I|L}S]}{I|L}{[QN]|[E{I|L}]|[KN]}D[Y{I|L}]{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{I|L}{[QN]|[E{I|L}]|[KN]}DT[QP]P;{[TV]|[{I|L}S]}GE{[VA]|[{I|L}G]}V[{I|L}P]{NN|[MP]|[D{I|L}]|[EV]};{[TV]|[{I|L}S]}GE[R{I|L}][{I|L}P]{NN|[MP]|[D{I|L}]|[EV]} 3.7755;3.3124;3.1878;3.0439;2.9699;1.8848;1.7225 -;-;-;-;-;-;- 405 + 1 1.658 72848.8 0.5 1346 5071 6415 SUDHL4_400M_050219_2,6419 SUDHL4_400M_050219_2,6419,SLIKETTTGY False True SLIKETTTGY 32.188749 556.795642077923 553036.5 6415.0 nc|ENSG00000120802|P42166|TMPO 6.609049161275228 2.0 True 10.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 6421 32.204 668.0 191240.0 25 0 48310.0 + 43368 WPWLGAPL 8 98 470.2567735464963 0 470.2563049197197 PEAK CID FTMS 0 0 0 6420 94459.546875 1.0 0 0.0 1 Unmodified _WPWLGAPL_ REV__ENST00000454036.6_2_20:44673649-44676200:+|nuORF 11.114462752807354 0.5290325060821968 6 E 1 -1 6.9897 0.0 0.0 0.74477 0.0 0.0 710.3515007289317 96.08236871890858 806.4338694478403 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.74477 - 65 + 1 1.658 103438.5 1.0 1347 5072 6420 SUDHL4_400M_050219_2,6421 SUDHL4_400M_050219_2,6421,WPWLGAPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6422 32.218 800.0 119180.0 25 0 7784.7 + 8856 EYVSSQLGRP 10 129 568.2926052187419 1134.5706575042836 2 568.2924072146416 MULTI CID FTMS 0 0 0 6420 87477.359375 0.5947516789617368 -1 0.0421981811523437 2 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 22.736283301280096 0.4578556481593033 6 {M(Oxidation (M))|F}STNG{I|L}RP 8 -1 50.782 0.0 0.0 4.4759 0.0 0.0 244.14385123690369 0.0 244.14385123690369 0.0 32.291392528858665 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.3494850021680094 {M(Oxidation (M))|F}STNG{I|L}RP 4.4759 - 407 + 1 1.658 75423.4 0.4900000095367431 1348 5072 6420 SUDHL4_400M_050219_2,6422 SUDHL4_400M_050219_2,6422,EYVSSQLGRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6423 32.227 526.0 193740.0 25 0 23647.0 38447 TRYIHHKI 8 116 534.3094287035085 1066.604304473817 2 534.3124267458916 MULTI CID FTMS 0 0 0 6420 125936.0234375 0.4985962741925646 -3 0.1347427368164062 3 Unmodified _TRYIHHKI_ ENSG00000173809|ENST00000639142|TDRD12;nc|ENSG00000173809|Q587J7|TDRD12 4.75600775471527 0.7954636275367004 6 Y 1 7 13.099 0.0 0.0 1.2281 0.0 0.0 885.5303584062373 0.0 885.5303584062373 0.0 2.821357152192814 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2281 + + 82 + 1 1.658 80870.8 1.0 1349 5072 6420 SUDHL4_400M_050219_2,6423 SUDHL4_400M_050219_2,6423,TRYIHHKI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6424 32.241 800.0 36839.0 25 0 2698.3 -1 0 55 792.8280864889152 3167.2832400892607 4 793.3301879763603 MULTI CID FTMS 0 0 0 6420 118024.9375 1.0 0 0.0 4 6 A 1 -1 3.0989 0.0 0.0 0.097842 0.0 0.0 2288.925343216017 804.2965792291624 3093.22192244518 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.097842 - 3 + 1 1.658 30339.3 0.5099999904632568 1350 5072 6420 SUDHL4_400M_050219_2,6424 SUDHL4_400M_050219_2,6424, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6425 32.246 254.0 214930.0 25 0 18732.0 -1 0 82 492.28331080152697 491.276034334927 1 492.2821838259697 MULTI CID FTMS 0 0 0 6420 91463.8828125 0.2191926563332337 13 -0.3444595336914062 5 6 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V 4 -1 + 26.198 0.0 0.0 5.3326 5.3326 81.245 0.0 0.0 0.0 4.286662482156345 14.415150965314876 4.286662482156345 4.286662482156345 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}V]QV;[{M(Oxidation (M))|F}V][AG]V 5.3326;4.4601;2.4816 -;-;- 21 1 1.658 49248.5 1.0 1351 5072 6420 SUDHL4_400M_050219_2,6425 SUDHL4_400M_050219_2,6425, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6427 32.256 332.0 178460.0 25 0 19122.0 + 31580 RQPDSPTALY 10 85 574.2899221200755 1146.565291306951 2 574.2897216677666 MULTI CID FTMS 0 0 0 6426 89420.46875 0.2311249561207035 4 -0.168792724609375 1 Unmodified _RQPDSPTALY_ ENSG00000132382|ENST00000254718|MYBBP1A;ENST00000574547.5_1_17:4442712-4447986:-|nuORF;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A 23.78978130925829 0.4341852049148378 6 {[TV]|[{I|L}S]}G[HQ]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A{I|L}Y 10 7 + 39.037 0.0 0.0 3.4046 3.4046 72.802 0.0 0.0 0.0 0.1478619745027742 26.640749640939912 0.1478619745027742 2.218487496163561 0 1.0 1.0457574905606752 0.9247425010840048 0.0 {[TV]|[{I|L}S]}G[HQ]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A{I|L}Y;{[TV]|[{I|L}S]}GYY[TP]A{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HQ]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A{I|L}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YY[TP]A{I|L}Y;[KA]{[HG]|PP}C{[RE]|[WV]}A{I|L}Y 3.4046;3.2112;2.7551;2.5616;2.4527 -;-;-;-;- 325 1 1.658 47272.4 1.0 1352 5073 6426 SUDHL4_400M_050219_2,6427 SUDHL4_400M_050219_2,6427,RQPDSPTALY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6428 32.268 693.0 143700.0 25 0 13363.0 + 8872 FADHVSSSL 9 122 481.73277936033577 961.4510057874716 2 481.7325012087822 MULTI CID FTMS 0 0 0 6426 122957.4140625 0.928667346886754 -1 0.0571708679199218 2 Unmodified _FADHVSSSL_ ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA 34.10243960390752 0.1078313939113124 6 [HD]A{M(Oxidation (M))|F}VSSS{I|L} 9 4 + 38.471 0.0 0.0 4.0013 4.0013 77.969 0.0 0.0 0.0 5.671918431974135 7.944539621753542 5.671918431974135 5.671918431974135 0 0.8182503180159344 0.7958800173440752 0.4247425010840047 0.0 [HD]A{M(Oxidation (M))|F}VSSS{I|L};{[TV]|[{I|L}S]}T[HM]SSS{I|L};{[TV]|[{I|L}S]}TPEE{[WT]|[RM]};{[MS]|[{M(Oxidation (M))|F}A]}[HD]VSSS{I|L};[PA]T{[WN]|[YH]}SSS{I|L};[H{I|L}][YQ]DSS{I|L};[QP][MN]VSSS{I|L};[HV]MDK[W{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}[HS]VDSS{I|L};[HD]V[VP]C(Carbamidomethyl (C))[HV] 4.0013;3.4114;2.3045;1.4933;1.454;1.2233;1.2013;1.0763;0.76635;0.71067 -;-;-;+;-;-;-;-;-;- + 649 1 1.658 83410.4 1.0 1353 5073 6426 SUDHL4_400M_050219_2,6428 SUDHL4_400M_050219_2,6428,FADHVSSSL True True FADHVSSSL 32.267836 481.732501208782 686994.75 6426.0 nc|ENSG00000164944|Q69YN4-4|VIRMA;;nc|ENSG00000164944|Q69YN4-2|VIRMA;;ENSG00000164944|ENST00000297591|VIRMA;;nc|ENSG00000164944|Q69YN4-3|VIRMA 2.8502593835194907 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6429 32.282 800.0 187140.0 25 0 12398.0 + 25382 NAYSDCGWF 9 153 531.7051208610325 1061.3956887888648 2 531.7043945193291 MULTI CID FTMS 0 0 0 6426 92870.4453125 0.1512489003126201 -4 0.1919136047363281 3 Unmodified _NAYSDCGWF_ REV__ENSG00000205213|ENST00000379214|LGR4;REV__nc|ENSG00000205213|Q9BXB1-2|LGR4 11.640296217721598 0.521594087909532 6 {[QG]|[NA]}PQ{M(Oxidation (M))|F}T 6 -1 27.113 0.0 0.0 2.5544 0.0 0.0 0.0 400.0634472959807 400.0634472959807 1.8914278070920505 0.0 0.0 0.0 0 0.6861818737241735 0.6020599913279624 0.3807196863200844 0.0 {[QG]|[NA]}PQ{M(Oxidation (M))|F}T 2.5544 - 276 + 1 1.658 119455.7 0.4799999892711639 1354 5073 6426 SUDHL4_400M_050219_2,6429 SUDHL4_400M_050219_2,6429,NAYSDCGWF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6431 32.292 428.0 204700.0 25 0 45904.0 19077 LDRKEELRL 9 80 586.3428193243102 1170.6710857154203 2 586.3429443240166 MULTI CID FTMS 0 0 0 6430 108998.921875 0.7682358428074364 1 -0.0560722351074218 1 Unmodified _LDRKEELRL_ ENSG00000158428|ENST00000289388|CATIP 8.745405648335112 0.6093864874670651 6 V 1 9 0.088644 0.0 0.0 0.0075721 0.0 0.0 549.3635428460829 519.2280367486936 1068.5915795947765 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.0075721 - 4 + 1 1.658 71417.2 1.0 1355 5074 6430 SUDHL4_400M_050219_2,6431 SUDHL4_400M_050219_2,6431,LDRKEELRL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6432 32.296 230.0 418560.0 25 0 115680.0 + 38408 TREVGPVVHR 10 91 383.8884800108103 1148.643610632631 3 383.8890563845634 MULTI CID FTMS 0 0 0 6430 233099.109375 0.3223029879163571 -3 0.1351242065429687 2 Unmodified _TREVGPVVHR_ REV__ENSG00000130589|ENST00000467148|HELZ2;REV__nc|ENSG00000130589|Q9BYK8|HELZ2 21.53697664764585 0.484802182336468 6 DPVVHR 6 -1 36.628 0.0 0.0 3.1888 0.0 0.0 427.257950210072 0.0 427.257950210072 0.0 29.63879549246316 0.0 0.0 0 0.5 0.0 0.0 0.5796896906561032 DPVVHR 3.1888 - 183 + 1 1.658 86710.7 1.0 1356 5074 6430 SUDHL4_400M_050219_2,6432 SUDHL4_400M_050219_2,6432,TREVGPVVHR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6433 32.306 585.0 96116.0 25 0 5507.3 7716 ELDDLRMNWIV 11 100 702.3533094444841 1402.6920659557682 2 702.3540527224541 MULTI CID FTMS 0 0 0 6430 97739.21875 0.951609589528219 -2 0.092926025390625 3 Unmodified _ELDDLRMNWIV_ ENST00000396271.7_1_10:27486275-27486362:-|nuORF 13.042465956692816 0.7638483625850725 6 {[QS]|[NT]}SVWWPSNTV{I|L} 12 11 + 60.554 0.0 0.0 4.317 4.317 76.68 0.0 0.0 0.0 4.366351778869102 45.949952246461606 4.366351778869102 3.0776337832295013 0 0.6694451763165201 0.0 1.4291746928241125 0.3807196863200844 {[QS]|[NT]}SVWWPSNTV{I|L};{[QS]|[NT]}S[KQ]{[QS]|[NT]}PSNTV{I|L};{[QS]|[NT]}S[KQ][PS]QSNTV{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}DQQKQSNTV{I|L};{[TV]|[{I|L}S]}[NS]WWPSNTV{I|L};{[QS]|[NT]}SVWWPSGGTV{I|L};[QP]H[HD]KQSNTV{I|L};{[QS]|[NT]}P[{M(Oxidation (M))|F}V]{[QS]|[NT]}PSNTV{I|L};{[QS]|[NT]}P[{M(Oxidation (M))|F}V][PS]QSNTV{I|L};{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))R][PS]QSNTV{I|L} 4.317;4.0976;4.0976;3.9649;3.8195;3.6684;3.6395;3.6338;3.6338;3.581 -;-;-;-;-;-;-;-;-;- 756 1 1.658 45858.6 1.0 1357 5074 6430 SUDHL4_400M_050219_2,6433 SUDHL4_400M_050219_2,6433,ELDDLRMNWIV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6434 32.32 800.0 82634.0 25 0 8268.9 10971 GAPSPGPG 8 93 639.3116779420591 638.304401475459 1 639.3100463747978 MULTI CID FTMS 0 0 0 6430 99068.890625 1.0 0 0.0 4 Unmodified _GAPSPGPG_ nc|ENSG00000067221|Q9UBI4-6|STOML1 2.889219685676258 0.8067950007271085 6 {I|L}Q 2 8 28.469 0.0 0.0 4.4601 0.0 0.0 379.15156173310095 0.0 379.15156173310095 0.0 17.755762612236907 0.0 0.0 0 0.0 0.0 0.0 0.75 {I|L}Q 4.4601 - 39 + 1 1.658 57724.5 0.4799999892711639 1358 5074 6430 SUDHL4_400M_050219_2,6434 SUDHL4_400M_050219_2,6434,GAPSPGPG False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 6435 32.331 640.0 123400.0 25 0 9601.2 + 33560 SILRHVAEV 9 104 512.3012197949396 1022.5878866566792 2 512.3006469607353 MULTI CID FTMS 0 0 0 6430 84408.5078125 1.0 0 0.0 5 Unmodified _SILRHVAEV_ ENSG00000134001|ENST00000256383|EIF2S1 43.9818466556824 0.0535980856389242 6 {[TV]|[{I|L}S]}{I|L}RHVAEV 9 0 + 61.606 0.0 0.0 6.0245 6.0245 78.053 0.0 0.0 0.0 7.262561216922862 13.784162674354697 7.262561216922862 0.1464533319200001 0 1.1886218330464624 2.0 0.2887254899964357 0.0 + + {[TV]|[{I|L}S]}{I|L}RHVAEV;{[TV]|[{I|L}S]}[RH]{I|L}VAEV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]HVAEV;V{M(Oxidation (M))|F}AV{I|L}RRY;{[TV]|[{I|L}S]}{I|L}RH[W{I|L}]V;{[TV]|[{I|L}S]}[RH]{I|L}[W{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]H[W{I|L}]V 6.0245;6.0102;5.3143;3.7175;3.5531;3.5387;2.8428 +;-;-;-;-;-;- + 185 1 1.658 65935.8 1.0 1359 5074 6430 SUDHL4_400M_050219_2,6435 SUDHL4_400M_050219_2,6435,SILRHVAEV True True SILRHVAEV 32.331411 512.300646960735 457048.6875 6430.0 ENSG00000134001|ENST00000256383|EIF2S1 4.226411660512288 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6436 32.338 351.0 331210.0 25 0 27143.0 + 22714 LQFPVGRVHR 10 112 403.5718668187219 1207.6937710563657 3 403.5717956423759 MULTI CID FTMS 0 0 0 6430 77675.734375 0.1789415837850625 -5 0.2276687622070312 6 Unmodified _LQFPVGRVHR_ ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 19.62595529434964 0.5182375435722777 6 {I|L}Q{M(Oxidation (M))|F} 3 7 33.188 0.0 0.0 2.748 0.0 0.0 0.0 816.4591690321756 816.4591690321756 -1.431759481772097 0.0 -1.431759481772097 0.0 0 0.5 0.0 0.0 0.5 + {I|L}Q{M(Oxidation (M))|F} 2.748 + + 198 + 1 1.658 94963.2 1.0 1360 5074 6430 SUDHL4_400M_050219_2,6436 SUDHL4_400M_050219_2,6436,LQFPVGRVHR False True LQFPVGRVHR 32.337744 403.571795642376 5527741.0 6430.0 nc|ENSG00000246705|Q9BTM1-2|H2AJ;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000274997|ENST00000377459|H2AC12;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000196747|ENST00000358739|H2AC13;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000184270|ENST00000331128|H2AC21;;ENSG00000276903|ENST00000613174|H2AC16;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000180573|ENST00000377791|H2AC6;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000246705|ENST00000544848|H2AJ 9.445647875467936 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6438 32.355 800.0 97919.0 25 0 10195.0 -1 KDSTAWMEQFY 11 114 711.3066540099268 1420.5987550866537 2 711.3081542849541 MULTI CID FTMS 0 0 0 6437 55835.140625 0.4193601764447771 1 -0.0425910949707031 1 Oxidation (M) _KDSTAWM(Oxidation (M))EQFY_ ENSG00000171804|ENST00000447313|WDR87;nc|ENSG00000171804|Q6ZQQ6-2|WDR87;nc|ENSG00000171804|Q6ZQQ6|WDR87 12.240655878213236 0.7805268987462184 6 [QA][HD]EAQNQA{M(Oxidation (M))|F}Y 12 -1 + 48.787 0.0 0.0 3.4343 3.4343 73.844 0.0 0.0 0.0 3.1767339569441333 29.34546476584131 3.1767339569441333 3.0102999566398125 0 0.5484550065040282 0.744727494896694 0.0 0.555462187404089 [QA][HD]EAQNQA{M(Oxidation (M))|F}Y;[QA][HD]EAQQNA{M(Oxidation (M))|F}Y;[QA]E[HD]AQNQA{M(Oxidation (M))|F}Y;[QA]E[HD]AQQNA{M(Oxidation (M))|F}Y;[QA][HD]EAQGGQA{M(Oxidation (M))|F}Y;[QA][HD]EA[AG]NQA{M(Oxidation (M))|F}Y;[QA][HD]EAQN[AG]A{M(Oxidation (M))|F}Y;[EP][{M(Oxidation (M))|F}E][YN]NQA{M(Oxidation (M))|F}Y;[QA][HD]EAQ[AG]NA{M(Oxidation (M))|F}Y;[QA][HD]EA[AG]QNA{M(Oxidation (M))|F}Y 3.4343;3.2224;3.0423;2.8304;2.7938;2.7938;2.7938;2.7234;2.5819;2.5819 -;-;-;-;-;-;-;-;-;- 1014 1 1.658 59921.4 0.5799999833106995 1361 5075 6437 SUDHL4_400M_050219_2,6438 SUDHL4_400M_050219_2,6438,KDSTAWMEQFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6439 32.363 403.0 289260.0 25 0 32051.0 + 16988 KIWDPVHRV 9 129 575.3306892343816 0 575.3316528201103 PEAK CID FTMS 0 0 0 6437 175100.84375 0.6331899456719497 -2 0.091827392578125 2 Unmodified _KIWDPVHRV_ ENSG00000134900|ENST00000376052|TPP2;nc|ENSG00000134900|P29144|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 27.088373467376528 0.1368127342934387 6 {I|L}WDVP 5 5 39.993 0.0 0.0 3.4817 0.0 0.0 128.09837412808514 407.2138155572876 535.3121896853727 0.0 0.0 0.0 0.0 0 1.6549471895720984 0.0 0.0 0.0 {I|L}WDVP 3.4817 - 781 + 1 1.658 90496.7 1.0 1362 5075 6437 SUDHL4_400M_050219_2,6439 SUDHL4_400M_050219_2,6439,KIWDPVHRV False True KIWDPVHRV 32.362673 575.33165282011 9475630.375 6437.0 nc|ENSG00000134900|P29144|TPP2;;ENSG00000134900|ENST00000376052|TPP2;;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 8.553755442301432 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6440 32.369 326.0 203430.0 25 0 7336.5 + 26230 NQIRPGLQY 9 101 544.7958811491914 1087.5772093651826 2 544.7957031130791 MULTI CID FTMS 0 0 0 6437 119069.6640625 0.2149136866061101 -6 0.2837409973144531 3 Unmodified _NQIRPGLQY_ ENSG00000165209|ENST00000348403|STRBP;nc|ENSG00000165209|Q96SI9-2|STRBP 88.90359156742426 0.0153595091083554 6 Y{M(Oxidation (M))|F}R{I|L}NQY 7 6 48.467 0.0 0.0 4.4564 0.0 0.0 85.0897465436539 0.0 85.0897465436539 0.0 16.471769925058837 0.0 0.0 0 0.75 0.0 0.0 0.7302046884880937 Y{M(Oxidation (M))|F}R{I|L}NQY 4.4564 - 602 1 1.658 56883.2 1.0 1363 5075 6437 SUDHL4_400M_050219_2,6440 SUDHL4_400M_050219_2,6440,NQIRPGLQY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6441 32.375 360.0 363250.0 25 0 35764.0 + 30873 RIMSGESTF 9 131 522.2447685867163 1042.4749842402323 2 522.2446166872978 MULTI CID FTMS 0 0 0 6437 264831.84375 0.4497053461783091 -2 0.091827392578125 4 Oxidation (M) _RIM(Oxidation (M))SGESTF_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 66.45667989310934 0.0225072657982126 6 [R{I|L}]{M(Oxidation (M))|F}SGEST{M(Oxidation (M))|F} 9 0 + 78.822 0.0 0.0 7.561 7.561 87.816 0.0 0.0 0.0 15.932452471761032 62.800128627058 15.932452471761032 4.771212547196626 0 1.0 1.3010299956639813 1.5669015600442575 0.0 + + [R{I|L}]{M(Oxidation (M))|F}SGEST{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}SGTDT{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}SGTSE{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}SG[WM]{M(Oxidation (M))|F};[DN]EY[RV]T{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}TY[RV]T{M(Oxidation (M))|F};AAQQ[YQ]ST{M(Oxidation (M))|F};[NP]AA{M(Oxidation (M))|F}[Y{I|L}]T{M(Oxidation (M))|F};[DN][RD][Y{I|L}]T{M(Oxidation (M))|F};{[DA]|[EG]}[Y{I|L}][WQ]T{M(Oxidation (M))|F} 7.561;7.1034;5.6222;4.7592;3.3541;3.2739;2.9559;2.4784;2.3458;1.4287 +;-;-;-;-;-;-;-;-;- + 755 1 1.658 100487.8 1.0 1364 5075 6437 SUDHL4_400M_050219_2,6441 SUDHL4_400M_050219_2,6441,RIMSGESTF True False RIMSGESTF 32.375098 522.244616687298 5726121.0 6437.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 8.670693715413412 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6442 32.38 284.0 245630.0 25 0 27436.0 -1 0 79 517.2850613753723 516.2777849087722 1 517.2845336794853 MULTI CID FTMS 0 0 0 6437 199716.515625 0.9634795554165236 -16 0.3952693939208984 5 6 {I|L} 1 -1 9.7539 0.0 0.0 1.8893 0.0 0.0 385.18255283045033 0.0 385.18255283045033 0.0 8.784809756568528 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.8893 - 5 + 1 1.658 60170.6 1.0 1365 5075 6437 SUDHL4_400M_050219_2,6442 SUDHL4_400M_050219_2,6442, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6444 32.397 800.0 140980.0 25 0 10030.0 25362 NAVLRKLL 8 117 463.81077930206953 925.6070056709392 2 463.8108398318291 MULTI CID FTMS 0 0 0 6443 94533.4140625 0.93610190868357 1 -0.0343742370605468 1 Unmodified _NAVLRKLL_ ENSG00000198691|ENST00000370225|ABCA4 16.942295170755138 0.6606234159769251 6 {I|L}NG{I|L}KR{I|L}{I|L} 8 5 + 24.442 0.0 0.0 2.6407 2.6407 82.607 0.0 0.0 0.0 13.332815690330122 1.1143281941665606 1.1143281941665606 24.442059438411903 0 0.778659694992122 0.0 0.0 0.0 {I|L}NG{I|L}KR{I|L}{I|L} 2.6407 - 61 + 1 1.658 89674.2 0.449999988079071 1366 5076 6443 SUDHL4_400M_050219_2,6444 SUDHL4_400M_050219_2,6444,NAVLRKLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6445 32.398 34.0 1938400.0 25 0 225260.0 + 17005 KIYEGQVEV 9 90 532.7847150373982 1063.5548771415963 2 532.7848388552666 MULTI CID FTMS 0 0 0 6443 1661584.375 0.1132568062248205 -15 0.4133262634277344 2 Unmodified _KIYEGQVEV_ ENSG00000122406|ENST00000370321|RPL5;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 66.45667989310934 0.0225072657982126 6 {[QG]|[NA]}EY[K{I|L}]VEV 9 6 + 66.906 0.0 0.0 6.2908 6.2908 80.667 0.0 0.0 0.0 1.447154985521948 16.478174818886373 1.447154985521948 1.447154985521948 0 0.7742275032520141 0.0 1.1421590589602533 1.0629529932484498 {[QG]|[NA]}EY[K{I|L}]VEV;[AG]GEY[K{I|L}]VEV;{[QG]|[NA]}EYV[K{I|L}]EV;[AG]GEYV[K{I|L}]EV;[YE][K{I|L}]GQVEV;{[QG]|[NA]}EVY[K{I|L}]EV;[{M(Oxidation (M))|F}V]{[WT]|[RM]}GQVEV;[AG]GEVY[K{I|L}]EV;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}Y[K{I|L}]EV;[YE]{[QG]|[NA]}[K{I|L}]VEV 6.2908;6.1548;4.9219;4.7858;4.7829;4.5867;4.5544;4.4506;4.2371;4.0639 -;-;-;-;-;-;-;-;-;- 441 1 1.658 62825.4 1.0 1367 5076 6443 SUDHL4_400M_050219_2,6445 SUDHL4_400M_050219_2,6445,KIYEGQVEV True True KIYEGQVEV 32.397869 532.784838855267 78678160.0 6443.0 ENSG00000122406|ENST00000370321|RPL5;;ENST00000454085.2_1_15:28141134-28141371:+|nuORF 1.5728322466214495 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6446 32.401 151.0 566320.0 25 0 47208.0 + 40529 VIWGKVTRA 9 75 515.3138457778084 1028.6131386224167 2 515.3136474490166 MULTI CID FTMS 0 0 0 6443 366535.21875 0.4936524947973235 -3 0.1344184875488281 3 Unmodified _VIWGKVTRA_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 29.84058131909904 0.1515068451768857 6 V{I|L}WGKV 6 3 76.459 0.0 0.0 7.4332 0.0 0.0 0.0 343.1732271783813 343.1732271783813 66.99478448944497 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.4247425010840047 + V{I|L}WGKV 7.4332 + + 93 + 1 1.658 69582.2 1.0 1368 5076 6443 SUDHL4_400M_050219_2,6446 SUDHL4_400M_050219_2,6446,VIWGKVTRA False True VIWGKVTRA 32.400879 515.313647449017 6683672.0 6443.0 ENSG00000182899|ENST00000647248|RPL35A;;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 6.029552300771077 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6447 32.415 800.0 110080.0 25 0 7784.5 + -1 VQMHKMKQCLQ 11 125 731.8509360940172 1461.6873192548344 2 731.8478881716728 MULTI CID FTMS 0 0 0 6443 82293.953125 0.5970321675394996 -1 0.0425910949707031 4 Carbamidomethyl (C),2 Oxidation (M) _VQM(Oxidation (M))HKM(Oxidation (M))KQC(Carbamidomethyl (C))LQ_ REV__ENSG00000106546|ENST00000242057|AHR 39.94969957227396 0.2131707853268865 6 {[QV]|[N{I|L}]|[RA]|[KV]}NWW{[VA]|[{I|L}G]}DG{M(Oxidation (M))|F}{I|L}Q 12 -1 + 70.799 0.0 0.0 4.8436 4.8436 87.087 0.0 0.0 0.0 24.3312325961992 9.09823369650912 9.09823369650912 16.12726436942591 0 2.0 2.0 0.0 1.174742501084005 {[QV]|[N{I|L}]|[RA]|[KV]}NWW{[VA]|[{I|L}G]}DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NWW{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}[HQ]A[W{I|L}]EE[WH];{[QV]|[N{I|L}]|[RA]|[KV]}[HQ]{[QN]|[E{I|L}]|[KN]}QEE[WH];{[QN]|[E{I|L}]|[KN]}VWW{[VA]|[{I|L}G]}DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NWW{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{I|L}NQ;{[QV]|[N{I|L}]|[RA]|[KV]}NWW{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EVNQ;[KA]C(Carbamidomethyl (C))Y[{I|L}V]QEE[WH];{[QN]|[E{I|L}]|[KN]}[H{I|L}]A[W{I|L}]EE[WH];{[QN]|[E{I|L}]|[KN]}VWW{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DN{I|L}Q 4.8436;3.7403;3.6874;3.2755;3.179;2.8035;2.7372;2.5321;2.2453;2.0757 -;-;-;-;-;-;-;-;-;- 1165 1 1.658 65350.2 0.4399999976158142 1369 5076 6443 SUDHL4_400M_050219_2,6447 SUDHL4_400M_050219_2,6447,VQMHKMKQCLQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6449 32.425 362.0 96995.0 25 0 7386.6 5975 DQVPSVNKQ 9 84 507.76420897564 1013.51386501808 2 507.7639037966728 MULTI CID FTMS 0 0 0 6448 63043.5625 0.1442290685279569 4 -0.1024932861328125 1 Unmodified _DQVPSVNKQ_ ENSG00000032742|ENST00000351808|IFT88;nc|ENSG00000032742|Q13099-1|IFT88;nc|ENSG00000032742|Q13099-3|IFT88 20.453626601364224 0.2830276176381075 6 [{I|L}A][WH]{M(Oxidation (M))|F} 5 9 23.072 0.0 0.0 2.2764 0.0 0.0 0.0 356.15599083278624 356.15599083278624 5.8534811358448735 0.0 0.0 0.0 0 0.2614393726401688 2.0 0.0 0.0 [{I|L}A][WH]{M(Oxidation (M))|F} 2.2764 - 91 1 1.658 31097.4 1.0 1370 5077 6448 SUDHL4_400M_050219_2,6449 SUDHL4_400M_050219_2,6449,DQVPSVNKQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6450 32.439 800.0 70998.0 25 0 18750.0 -1 0 40 1189.144480066167 3564.411610798701 3 1189.814379870892 MULTI CID FTMS 0 0 0 6448 194817.375 1.0 0 0.0 2 6 {M(Oxidation (M))|F}G 2 -1 10.969 0.0 0.0 0.30774 0.0 0.0 2000.6985503512385 1356.611719953846 3357.3102703050845 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}G 0.30774 - 5 + 1 1.658 56646.4 0.5099999904632568 1371 5077 6448 SUDHL4_400M_050219_2,6450 SUDHL4_400M_050219_2,6450, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6451 32.453 800.0 36061.0 25 0 9450.8 -1 0 32 1120.148136784101 3357.422580952504 3 1120.484179675579 MULTI CID FTMS 0 0 0 6448 108812.90625 1.0 0 0.0 3 6 T 1 -1 6.9897 0.0 0.0 0.20819 0.0 0.0 2424.470079587072 828.8871554010374 3253.3572349881097 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.20819 - 6 + 1 1.658 32971.4 0.3899999856948852 1372 5077 6448 SUDHL4_400M_050219_2,6451 SUDHL4_400M_050219_2,6451, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6454 32.473 800.0 77565.0 25 0 3757.1 -1 LDCRNVDRNVL 11 109 687.3485901511723 1372.6826273691445 2 687.3495361208916 MULTI CID FTMS 0 0 0 6453 105089.0078125 0.3472492549499708 -13 0.4655704498291015 1 Carbamidomethyl (C) _LDC(Carbamidomethyl (C))RNVDRNVL_ ENST00000289968.10_1_16:24930781-24931099:-|nuORF;ENST00000537417.1_16:24930737-24931099:-|nuORF 38.17557092003332 0.2405003631267018 6 {[TV]|[{I|L}S]}[NG]{[{M(Oxidation (M))|F}H]|[RQ]}SQSANV{I|L} 13 -1 + 73.249 0.0 0.0 5.3362 5.3362 77.391 0.0 0.0 0.0 0.5797910605041494 60.0618609422028 0.5797910605041494 1.261649677965778 0 0.5866968715561641 1.6989700043360187 1.2614393726401687 0.8494850021680094 {[TV]|[{I|L}S]}[NG]{[{M(Oxidation (M))|F}H]|[RQ]}SQSANV{I|L};{[NV]|[RG]}AHHPSQSANV{I|L};{[QG]|[NA]}VHHPSQSANV{I|L};{[SA]|[TG]}NV{[{M(Oxidation (M))|F}H]|[RQ]}SQSANV{I|L};{[QG]|[NA]}SV{[{M(Oxidation (M))|F}H]|[RQ]}SQSANV{I|L};[VS]WWPSQSANV{I|L};{[NV]|[RG]}AS{[{M(Oxidation (M))|F}H]|[RQ]}SQSANV{I|L};{[QG]|[NA]}VS{[{M(Oxidation (M))|F}H]|[RQ]}SQSANV{I|L};{[NV]|[RG]}AHHPS[AG]SANV{I|L};{[NV]|[RG]}AHHPSQSAGGV{I|L} 5.3362;5.2443;5.116;5.1045;5.0259;5.0238;4.7156;4.5873;4.5834;4.5834 -;-;-;-;-;-;-;-;-;- 1955 1 1.658 49530.3 0.4600000083446502 1373 5079 6453 SUDHL4_400M_050219_2,6454 SUDHL4_400M_050219_2,6454,LDCRNVDRNVL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6455 32.484 632.0 164850.0 25 0 23584.0 + + 27001 AQLPEKVEY 9 112 538.7845446824214 1075.5545364316426 2 538.7842895388603 MULTI CID FTMS 0 0 0 6453 93646.203125 0.37785267132798 -7 0.2681388854980469 2 Unmodified _PEKVIAEQY_ ENST00000591595.5_1_19:11130023-11172489:+|nuORF;nc|ENSG00000127616|P51532-5|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENSG00000127616|ENST00000344626|SMARCA4;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 34.40172386719151 0.1061884637610825 6 [EP]KVE{I|L}[QA]Y 9 -1 + 51.515 0.0 0.0 4.7896 4.7896 75.018 0.0 0.0 0.0 9.756406541405552 11.184852299030725 9.756406541405552 1.0921451867560208 0 0.3807196863200844 0.958607314841775 0.9247425010840048 0.0 [EP]KVE{I|L}[QA]Y;[EP]KV{I|L}E[QA]Y;[EP]KV{I|L}[QA]EY;[EP]K{I|L}D{I|L}[QA]Y;[{I|L}P]GSVE{I|L}[QA]Y;[EP]K{I|L}VE[QA]Y;[{I|L}P]GSV{I|L}E[QA]Y;[EP]K{I|L}V[QA]EY;[{I|L}P]GSV{I|L}[QA]EY;[VP]ASVE{I|L}[QA]Y 4.7896;4.688;4.4082;3.9511;3.8825;3.8495;3.7809;3.5697;3.5011;3.1901 -;-;-;-;-;-;-;-;-;- 687 1 1.658 83590.8 1.0 1374 5079 6453 SUDHL4_400M_050219_2,6455 SUDHL4_400M_050219_2,6455,PEKVIAEQY False False AQLPEKVEY 32.4843 538.78428953886 1416149.125 6453.0 ENST00000591595.5_1_19:11130023-11172489:+|nuORF;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;;ENSG00000127616|ENST00000344626|SMARCA4;;ENST00000592604.5_1_19:11123597-11172489:+|nuORF 5.314744631449382 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6456 32.498 800.0 63708.0 25 0 8367.3 -1 QIEMMKDRY 9 85 623.2829241051156 1244.5512952770312 2 623.2827636599541 MULTI CID FTMS 0 0 0 6453 85167.515625 1.0 0 0.0 3 2 Oxidation (M) _QIEM(Oxidation (M))M(Oxidation (M))KDRY_ ENSG00000205832|ENST00000444310|C16orf96 3.944395688203298 0.7769873103969335 6 [Q{I|L}]V 3 -1 11.21 0.0 0.0 0.90074 0.0 0.0 0.0 901.317108835878 901.317108835878 0.831546325076113 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 [Q{I|L}]V 0.90074 - 67 1 1.658 42991.8 0.4600000083446502 1375 5079 6453 SUDHL4_400M_050219_2,6456 SUDHL4_400M_050219_2,6456,QIEMMKDRY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6458 32.503 53.0 796410.0 25 0 50644.0 + 16838 KIAPNTPQL 9 73 491.29005666374405 980.565560394288 2 491.2899658083916 MULTI CID FTMS 0 0 0 6457 1030294.125 0.987680998691816 3 -0.0271530151367187 1 Unmodified _KIAPNTPQL_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 56.17704186161178 0.0281986971544335 6 [QP]{I|L}GKT 6 8 44.135 0.0 0.0 4.501 0.0 0.0 0.0 353.183753780896 353.183753780896 22.435012637084167 0.0 0.0 0.0 0 0.9247425010840048 1.2218487496163564 0.4247425010840047 0.3807196863200844 [QP]{I|L}GKT 4.501 - 134 1 1.658 41612.3 1.0 1376 5080 6457 SUDHL4_400M_050219_2,6458 SUDHL4_400M_050219_2,6458,KIAPNTPQL True True KIAPNTPQL 32.50337 491.289965808392 6580926.0 6457.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 5.433761755625407 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6459 32.517 800.0 98318.0 25 0 9371.6 + + 23449 RLMPENPTY 9 105 568.2926052187419 1134.5706575042836 2 568.2929565310478 MULTI CID FTMS 0 0 0 6457 58389.91796875 0.3969884550067575 7 -0.0482292175292968 2 Unmodified _LTFSHGYTPI_ nc|ENSG00000198862|O94822-3|LTN1;ENSG00000198862|ENST00000361371|LTN1 10.073929032068715 0.6785112666868882 6 [{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}NTS{M(Oxidation (M))|F} 8 -1 20.934 0.0 0.0 1.8451 0.0 0.0 0.0 241.1163477721149 241.1163477721149 7.439644787305397 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}T]{[QV]|[N{I|L}]|[RA]|[KV]}NTS{M(Oxidation (M))|F} 1.8451 - 305 1 1.658 65191.3 0.5 1377 5080 6457 SUDHL4_400M_050219_2,6459 SUDHL4_400M_050219_2,6459,LTFSHGYTPI False False RLMPENPTY 32.517206 568.292956531048 380938.625 6457.0 nc|ENSG00000198862|O94822-3|LTN1;;ENSG00000198862|ENST00000361371|LTN1 0.8072916766007742 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6466 32.546 365.0 141860.0 25 0 19326.0 16081 ITPSSSPSPV 10 82 486.2549422934278 970.4953316536556 2 486.2541076540947 MULTI CID FTMS 0 0 0 6465 53024.03125 0.3228543294913448 -14 0.3485069274902344 1 Unmodified _ITPSSSPSPV_ ENSG00000189079|ENST00000334344|ARID2;nc|ENSG00000189079|Q68CP9-3|ARID2 17.11289562659939 0.5604042439455784 6 [{I|L}T]SPS 5 5 35.177 0.0 0.0 3.6247 0.0 0.0 0.0 482.2280199487095 482.2280199487095 23.187587626244124 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.0 [{I|L}T]SPS 3.6247 - 77 1 1.658 45135.4 1.0 1378 5086 6465 SUDHL4_400M_050219_2,6466 SUDHL4_400M_050219_2,6466,ITPSSSPSPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6468 32.553 192.0 345930.0 25 0 78085.0 + 16987 KIWDPVHRV 9 86 383.8884800108103 1148.643610632631 3 383.8889953494072 MULTI CID FTMS 0 0 0 6467 287942.03125 0.3981335547244841 10 -0.2364578247070312 1 Unmodified _KIWDPVHRV_ ENSG00000134900|ENST00000376052|TPP2;nc|ENSG00000134900|P29144|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 30.7034409873982 0.1405282614900322 6 DPVV[RH] 6 5 33.391 0.0 0.0 2.907 0.0 0.0 427.2562948140747 0.0 427.2562948140747 0.0 26.40092514408778 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.3252574989159953 DPVV[RH] 2.907 - 143 + 1 1.658 61922.0 1.0 1379 5087 6467 SUDHL4_400M_050219_2,6468 SUDHL4_400M_050219_2,6468,KIWDPVHRV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6471 32.57 645.0 169440.0 25 0 32732.0 -1 GIKPLTMK 8 95 452.2701119254098 902.5256709176195 2 452.2701904177666 MULTI CID FTMS 0 0 0 6470 117837.578125 1.0 0 0.0 1 Oxidation (M) _GIKPLTM(Oxidation (M))K_ ENSG00000256229|ENST00000335117|ZNF486 21.74664581756881 0.5868176546531598 6 T{M(Oxidation (M))|F}Q 3 -1 20.63 0.0 0.0 2.2858 0.0 0.0 508.3373585431656 0.0 508.3373585431656 0.0 4.0359843160042175 0.0 0.0 0 0.5924778212679485 0.0 0.4247425010840047 0.0 T{M(Oxidation (M))|F}Q 2.2858 - 123 1 1.658 91334.3 1.0 1380 5089 6470 SUDHL4_400M_050219_2,6471 SUDHL4_400M_050219_2,6471,GIKPLTMK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6474 32.583 266.0 305000.0 25 0 23735.0 + 15625 IQFRRRGLY 9 96 403.5718668187219 1207.6937710563657 3 403.5717040896416 MULTI CID FTMS 0 0 0 6473 233553.875 0.5380380453163692 12 -0.2814979553222656 1 Unmodified _IQFRRRGLY_ REV__ENST00000264607.8_1_2:239356321-239356399:+|nuORF 19.361941925380144 0.3125782356748823 6 {I|L}Q{M(Oxidation (M))|F}R 4 -1 41.67 0.0 0.0 3.4504 0.0 0.0 0.0 660.3614596002561 660.3614596002561 15.951753372113018 0.0 0.0 0.0 0 0.5 0.0 0.0 0.9247425010840048 {I|L}Q{M(Oxidation (M))|F}R 3.4504 + + 68 + 1 1.658 65850.2 1.0 1381 5091 6473 SUDHL4_400M_050219_2,6474 SUDHL4_400M_050219_2,6474,IQFRRRGLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6475 32.597 800.0 116780.0 25 0 6222.4 + 60 AADPQIRQF 9 132 523.2755199331598 1044.5364869331197 2 523.2744628787041 MULTI CID FTMS 0 0 0 6473 81655.2734375 0.850836596798514 1 -0.0503044128417968 2 Unmodified _AADPQIRQF_ ENSG00000196497|ENST00000354464|IPO4;ENST00000558193.5_1_14:24657452-24657993:-|nuORF;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000560315.5_1_14:24657420-24657993:-|nuORF;ENST00000561199.5_1_14:24652794-24657993:-|nuORF;nc|ENSG00000196497|Q8TEX9-2|IPO4 34.10243960390752 0.1078313939113124 6 AADKH 5 6 39.208 0.0 0.0 3.7536 0.0 0.0 0.0 519.2434931189194 519.2434931189194 18.728633725728223 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 AADKH 3.7536 - 717 1 1.658 76191.6 0.4799999892711639 1382 5091 6473 SUDHL4_400M_050219_2,6475 SUDHL4_400M_050219_2,6475,AADPQIRQF True True AADPQIRQF 32.597086 523.274462878704 476012.78125 6473.0 ENST00000561199.5_1_14:24652794-24657993:-|nuORF;;ENST00000558193.5_1_14:24657452-24657993:-|nuORF;;nc|ENSG00000196497|Q8TEX9-2|IPO4;;ENSG00000196497|ENST00000354464|IPO4;;ENST00000560315.5_1_14:24657420-24657993:-|nuORF;;ENST00000559588.5_1_14:24652221-24657802:-|nuORF 5.106106519699097 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6476 32.611 800.0 128560.0 25 0 7151.7 -1 RVASVMQEY 9 117 549.7660548659412 1097.5175567986823 2 549.7644531130791 MULTI CID FTMS 0 0 0 6473 95071.4296875 0.1682834679511503 -6 0.0412673950195312 3 Oxidation (M) _RVASVM(Oxidation (M))QEY_ ENSG00000106588|ENST00000223321|PSMA2;ENST00000411875.1_1_7:42961455-42966220:-|nuORF;ENST00000429685.1_1_2:203044345-203044546:+|nuORF;ENST00000433579.1_1_7:42952135-42964395:-|nuORF 28.49450938151212 0.1686335738423394 6 SV{M(Oxidation (M))|F}QEY 6 -1 48.51 0.0 0.0 4.42 0.0 0.0 326.2072926251969 0.0 326.2072926251969 0.0 32.29003276963996 0.0 0.0 0 0.7887254899964358 0.0 0.2742275032520141 0.0 SV{M(Oxidation (M))|F}QEY 4.42 + + 403 1 1.658 81862.1 0.4900000095367431 1383 5091 6473 SUDHL4_400M_050219_2,6476 SUDHL4_400M_050219_2,6476,RVASVMQEY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6477 32.625 800.0 105660.0 25 0 39997.0 -1 RAMLKAFS 8 94 470.25754360831655 0 470.2570983767509 PEAK CID FTMS 0 0 0 6473 103769.4609375 1.0 0 0.0 4 Oxidation (M) _RAM(Oxidation (M))LKAFS_ ENST00000319394.7_1_1:27633971-27634208:+|nuORF 5.230669730166228 0.5807325378471833 6 {I|L} 1 -1 6.9897 0.0 0.0 0.74477 0.0 0.0 740.3269025469082 82.0669191949828 822.393821741891 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.74477 + + 12 + 1 1.658 69864.4 0.4699999988079071 1384 5091 6473 SUDHL4_400M_050219_2,6477 SUDHL4_400M_050219_2,6477,RAMLKAFS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6479 32.631 177.0 287850.0 25 0 12952.0 + 26231 NQIRPGLQY 9 92 544.7958811491914 1087.5772093651826 2 544.7960693240166 MULTI CID FTMS 0 0 0 6478 315217.28125 0.5689485103429308 11 -0.2311935424804687 1 Unmodified _NQIRPGLQY_ ENSG00000165209|ENST00000348403|STRBP;nc|ENSG00000165209|Q96SI9-2|STRBP 71.13359017698441 0.0206607516130725 6 Q{I|L}[VP]{I|L}NQY 8 4 45.095 0.0 0.0 4.1464 0.0 0.0 114.0432377545914 0.0 114.0432377545914 0.0 37.54767925505334 0.0 0.0 0 1.424742501084005 0.0 0.0 0.7302046884880937 Q{I|L}[VP]{I|L}NQY 4.1464 - 316 1 1.658 43944.4 1.0 1385 5092 6478 SUDHL4_400M_050219_2,6479 SUDHL4_400M_050219_2,6479,NQIRPGLQY True True NQIRPGLQY 32.630759 544.796069324017 7224687.0 6478.0 ENSG00000165209|ENST00000348403|STRBP;;nc|ENSG00000165209|Q96SI9-2|STRBP 8.108625570933023 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6480 32.639 479.0 148620.0 25 0 9048.5 -1 RIMSGESTF 9 120 522.2447685867163 1042.4749842402323 2 522.2446777224541 MULTI CID FTMS 0 0 0 6478 83533.390625 0.1418462818388453 15 -0.32647705078125 2 Oxidation (M) _RIM(Oxidation (M))SGESTF_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-3|MSH6;nc|ENSG00000116062|P52701-4|MSH6 29.84058131909904 0.1515068451768857 6 EST{M(Oxidation (M))|F} 4 -1 37.167 0.0 0.0 3.5653 0.0 0.0 560.2729969709 0.0 560.2729969709 0.0 24.69273760456403 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 EST{M(Oxidation (M))|F} 3.5653 + + 271 1 1.658 59290.8 1.0 1386 5092 6478 SUDHL4_400M_050219_2,6480 SUDHL4_400M_050219_2,6480,RIMSGESTF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6481 32.641 100.0 466430.0 25 0 44261.0 + 13367 HLGTPGPVSL 10 74 489.2747373971055 976.534921861011 2 489.2741577029228 MULTI CID FTMS 0 0 0 6478 559579.75 1.0 0 0.0 3 Unmodified _HLGTPGPVSL_ REV__ENSG00000122515|ENST00000309315|ZMIZ2;REV__nc|ENSG00000122515|Q8NF64-2|ZMIZ2;REV__nc|ENSG00000122515|Q8NF64-3|ZMIZ2 30.63653989081413 0.2803493085145199 6 [HT]QPVPVS{I|L} 9 -1 + 51.653 0.0 0.0 5.2895 5.2895 78.09 0.0 0.0 0.0 1.8052345079578915 7.689549981487076 1.8052345079578915 1.8052345079578915 0 0.5 0.0 1.1861818737241734 0.0 [HT]QPVPVS{I|L};[VP]H[QT]PVS{I|L};[HT]QPPVVS{I|L};[HT][AG]PVPVS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]VPVS{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[QT]PVS{I|L};[HT][AG]PPVVS{I|L};[VP]HVG[Q{I|L}]D{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]PVVS{I|L};[VP]H[NP][{I|L}T]S{I|L} 5.2895;5.1046;4.5913;4.3465;3.9859;3.8579;3.6484;3.4882;3.2877;2.9225 -;-;-;-;-;-;-;-;-;- 410 1 1.658 41989.1 1.0 1387 5092 6478 SUDHL4_400M_050219_2,6481 SUDHL4_400M_050219_2,6481,HLGTPGPVSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6482 32.653 649.0 138630.0 25 0 17300.0 + 12580 GVIEPNKEL 9 104 499.7791057828464 0 499.7797729372978 PEAK CID FTMS 0 0 0 6478 89621.9453125 0.865935261584468 -2 0.0543594360351562 4 Unmodified _GVIEPNKEL_ ENSG00000117475|ENST00000367808|BLZF1;nc|ENSG00000117475|Q9H2G9-2|BLZF1 39.957323273325 0.0619271662220897 6 SS{I|L}TQT{I|L}S 8 8 27.058 0.0 0.0 2.7124 0.0 0.0 111.07022220846792 66.03560815982655 177.10583036829445 0.0 0.0 0.0 0.0 0 0.718765315847925 0.0 0.3807196863200844 0.7302046884880937 SS{I|L}TQT{I|L}S 2.7124 - 651 + 1 1.658 73324.5 1.0 1388 5092 6478 SUDHL4_400M_050219_2,6482 SUDHL4_400M_050219_2,6482,GVIEPNKEL True True GVIEPNKEL 32.652699 499.779772937298 646820.625 6478.0 ENSG00000117475|ENST00000367808|BLZF1;;nc|ENSG00000117475|Q9H2G9-2|BLZF1 3.678594986597697 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6483 32.667 800.0 29041.0 25 0 8029.6 -1 0 20 1140.450067391638 3418.328372775114 3 1141.455615222454 MULTI CID FTMS 0 0 0 6478 73532.5546875 0.8790689842095413 -3 0.0681343078613281 5 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.658 30167.2 0.3100000023841858 1389 5092 6478 SUDHL4_400M_050219_2,6483 SUDHL4_400M_050219_2,6483, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6485 32.671 8.1 4144400.0 25 0 525920.0 + 15856 ISNEFKVEV 9 57 532.7847150373982 1063.5548771415963 2 532.7851440310478 MULTI CID FTMS 0 0 0 6484 6197067.0 0.422404078264897 2 -0.0782890319824218 1 Unmodified _ISNEFKVEV_ ENSG00000171603|ENST00000377298|CLSTN1;ENST00000477264.1_1_1:9790568-9793533:-|nuORF;nc|ENSG00000171603|O94985-2|CLSTN1 36.12702656103203 0.0967173616627612 6 {[QG]|[NA]}EY[K{I|L}]VEV 9 4 + 58.28 0.0 0.0 5.4797 5.4797 85.269 0.0 0.0 0.0 6.197114610913488 38.28996723740482 6.197114610913488 9.018637558036673 0 0.8494850021680094 0.0 0.7614393726401688 0.6307196863200843 {[QG]|[NA]}EY[K{I|L}]VEV;{[QG]|[NA]}EYV[K{I|L}]EV;{[QG]|[NA]}EVY[K{I|L}]EV;{NN|[MP]|[D{I|L}]|[EV]}{[QG]|[NA]}Y[K{I|L}]EV 5.4797;4.6318;4.6318;4.498 -;-;-;- 94 1 1.658 33576.6 1.0 1390 5093 6484 SUDHL4_400M_050219_2,6485 SUDHL4_400M_050219_2,6485,ISNEFKVEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6486 32.682 614.0 157780.0 25 0 20187.0 + 40530 VIWGKVTRA 9 104 515.3138457778084 1028.6131386224167 2 515.3136474490166 MULTI CID FTMS 0 0 0 6484 92580.1796875 0.1246877089393442 14 -0.2846946716308594 2 Unmodified _VIWGKVTRA_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 18.373094154950223 0.3393451798331396 6 V{I|L}ADGKVN{M(Oxidation (M))|F} 9 5 72.841 0.0 0.0 7.0815 0.0 0.0 0.0 82.0668200128539 82.0668200128539 59.74214396804989 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 V{I|L}ADGKVN{M(Oxidation (M))|F} 7.0815 - 233 + 1 1.658 78119.5 1.0 1391 5093 6484 SUDHL4_400M_050219_2,6486 SUDHL4_400M_050219_2,6486,VIWGKVTRA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6487 32.69 446.0 293990.0 25 0 32989.0 + 15961 ITAPPSRVL 9 88 477.2926588682337 952.5707648032676 2 477.2925903201103 MULTI CID FTMS 0 0 0 6484 159046.640625 0.0832919968538997 -10 0.1412734985351562 3 Unmodified _ITAPPSRVL_ ENSG00000099194|ENST00000370355|SCD 24.99096001346401 0.2132109383330889 6 {I|L}TAPP 5 4 54.53 0.0 0.0 5.7245 0.0 0.0 0.0 470.2726229303344 470.2726229303344 33.103531844243186 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}TAPP 5.7245 + + 67 + 1 1.658 107179.5 1.0 1392 5093 6484 SUDHL4_400M_050219_2,6487 SUDHL4_400M_050219_2,6487,ITAPPSRVL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6488 32.704 800.0 92409.0 25 0 6878.8 42019 VQQWRNWMLQ 10 102 702.8474076653223 1403.6802623974445 2 703.3496581912041 MULTI CID FTMS 0 0 0 6484 95092.125 0.7631227123795766 -2 0.0920867919921875 4 Oxidation (M) _VQQWRNWM(Oxidation (M))LQ_ ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1 41.8396318013385 0.1381409678234242 6 {[QV]|[N{I|L}]|[RA]|[KV]}NE[MT][HT]G{M(Oxidation (M))|F}{I|L}Q 12 7 + 72.348 0.0 0.0 5.1541 5.1541 78.15 0.0 0.0 0.0 10.290003832308445 57.88373211319538 10.290003832308445 2.218487496163561 0 1.8494850021680087 2.0 0.0 1.024227503252014 {[QV]|[N{I|L}]|[RA]|[KV]}NE[MT][HT]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[MT][{I|L}T]NN{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NE[MT][HT]GYPK;{[QV]|[N{I|L}]|[RA]|[KV]}NE[MT][{I|L}T]EDPK;[KA][WH]{M(Oxidation (M))|F}RDG{M(Oxidation (M))|F}{I|L}Q;[KA][WH]{M(Oxidation (M))|F}RDGYPQ 5.1541;4.9961;4.3191;3.9466;2.7149;1.8798 -;-;-;-;-;- 392 1 1.658 57293.3 0.4600000083446502 1393 5093 6484 SUDHL4_400M_050219_2,6488 SUDHL4_400M_050219_2,6488,VQQWRNWMLQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6490 32.717 616.0 210920.0 25 0 18402.0 -1 MDNITRQNQFY 11 93 744.3303692585547 1486.6461855839093 2 744.3289062380791 MULTI CID FTMS 0 0 0 6489 183805.84375 0.5412151852703165 -6 0.1512603759765625 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 6 {[QG]|[NA]}GAQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y 13 -1 + 82.191 0.0 0.0 5.5286 5.5286 83.853 0.0 0.0 0.0 7.099653886374824 11.448658907276382 7.099653886374824 6.642078980768076 0 0.8935078169319297 0.744727494896694 0.0 1.960409376976188 {[QG]|[NA]}GAQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE{M(Oxidation (M))|F}[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA[AG]E{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE{M(Oxidation (M))|F}Q[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQE{M(Oxidation (M))|F}QQGGA{M(Oxidation (M))|F}Y;[AG]NAQE{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}{M(Oxidation (M))|F}{[QG]|[NA]}EAQQNA{M(Oxidation (M))|F}Y 5.5286;5.0819;5.0511;4.9911;4.9184;4.9184;4.9184;4.9184;4.7974;4.6702 -;-;-;-;-;-;-;-;-;- 6436 1 1.658 96619.8 1.0 1394 5094 6489 SUDHL4_400M_050219_2,6490 SUDHL4_400M_050219_2,6490,MDNITRQNQFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6491 32.731 800.0 138640.0 25 0 14500.0 + 15782 ISEENFRVM 9 133 570.7708530319599 1139.5271531307196 2 570.7717162966728 MULTI CID FTMS 0 0 0 6489 119812.8125 0.6414940850183245 -4 0.1334228515625 2 Oxidation (M) _ISEENFRVM(Oxidation (M))_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 85.64151623876279 0.0161498729896241 6 {I|L}SEEN{M(Oxidation (M))|F}RV{M(Oxidation (M))|F} 9 0 + 99.409 0.0 0.0 8.7237 8.7237 93.761 0.0 0.0 0.0 81.22154405477026 13.46787486224656 13.46787486224656 9.208187539523747 0 1.2302046884880935 2.0 1.055462187404089 0.0 + + {I|L}SEEN{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};{I|L}SEEGG{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};{I|L}SEEN{M(Oxidation (M))|F}HPPA;{I|L}SEEN{M(Oxidation (M))|F}HPAP;{I|L}SEEGG{M(Oxidation (M))|F}HPPA;{I|L}SEEGG{M(Oxidation (M))|F}HPAP;{I|L}S{M(Oxidation (M))|F}WWRV{M(Oxidation (M))|F};{I|L}SEEN[HM]{I|L}PA;{I|L}SEEN[HM]{I|L}AP;{I|L}S{M(Oxidation (M))|F}{M(Oxidation (M))|F}[QP][VG]V{M(Oxidation (M))|F} 8.7237;7.9156;6.7754;6.7508;5.9712;5.9466;5.8041;5.717;5.6924;4.9511 +;-;-;-;-;-;-;-;-;- + 1368 + 1 1.658 87421.2 0.5400000214576721 1395 5094 6489 SUDHL4_400M_050219_2,6491 SUDHL4_400M_050219_2,6491,ISEENFRVM True False ISEENFRVM 32.73099 570.771716296673 12881457.0 6489.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 7.235951900482178 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6492 32.745 800.0 44339.0 25 0 11500.0 -1 0 33 1188.8157494146556 3563.425418844167 3 1189.811450183392 MULTI CID FTMS 0 0 0 6489 72289.1640625 0.4340450010169763 -9 0.1706352233886718 3 6 G{M(Oxidation (M))|F} 2 -1 7.9588 0.0 0.0 0.22335 0.0 0.0 2146.760552893504 1209.5774630182252 3356.3380159117287 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G{M(Oxidation (M))|F} 0.22335 - 6 + 1 1.658 39009.9 0.3000000119209289 1396 5094 6489 SUDHL4_400M_050219_2,6492 SUDHL4_400M_050219_2,6492, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6494 32.763 800.0 64866.0 25 0 2950.8 -1 LDCRNVDRNVL 11 100 687.3485901511723 1372.6826273691445 2 687.3500854372978 MULTI CID FTMS 0 0 0 6493 77648.7265625 0.2565773814779029 3 -0.0589027404785156 1 Carbamidomethyl (C) _LDC(Carbamidomethyl (C))RNVDRNVL_ ENST00000289968.10_1_16:24930781-24931099:-|nuORF;ENST00000537417.1_16:24930737-24931099:-|nuORF 15.248480904072842 0.7179608125786238 6 EQ{[SA]|[TG]}NV{I|L} 7 -1 44.668 0.0 0.0 3.2541 0.0 0.0 613.3069935529312 0.0 613.3069935529312 0.0 33.92024295247633 0.0 0.0 0 0.5709991640913001 0.0 0.75 0.4247425010840047 EQ{[SA]|[TG]}NV{I|L} 3.2541 - 573 1 1.658 44583.4 0.5199999809265137 1397 5095 6493 SUDHL4_400M_050219_2,6494 SUDHL4_400M_050219_2,6494,LDCRNVDRNVL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6495 32.766 167.0 253650.0 25 0 17923.0 + 29240 QGVVTTLENV 10 73 530.2877718788941 1058.560990824588 2 530.2882568240166 MULTI CID FTMS 0 0 0 6493 272697.875 0.3277457919169079 -8 0.198486328125 2 Unmodified _QGVVTTLENV_ ENSG00000115414|ENST00000354785|FN1;ENST00000492816.6_1_2:216226280-216244056:-|nuORF;nc|ENSG00000115414|P02751-1|FN1;nc|ENSG00000115414|P02751-10|FN1;nc|ENSG00000115414|P02751-11|FN1;nc|ENSG00000115414|P02751-12|FN1;nc|ENSG00000115414|P02751-13|FN1;nc|ENSG00000115414|P02751-14|FN1;nc|ENSG00000115414|P02751-17|FN1;nc|ENSG00000115414|P02751-3|FN1;nc|ENSG00000115414|P02751-4|FN1;nc|ENSG00000115414|P02751-5|FN1;nc|ENSG00000115414|P02751-6|FN1;nc|ENSG00000115414|P02751-7|FN1;nc|ENSG00000115414|P02751-8|FN1;nc|ENSG00000115414|P02751-9|FN1 41.95555342248728 0.1369168616057562 6 DE{I|L}T[RP]NV 8 7 57.657 0.0 0.0 5.4467 0.0 0.0 116.09494846102524 0.0 116.09494846102524 0.0 32.90266824002046 0.0 0.0 0 0.4247425010840047 0.0 1.1989700043360187 0.805462187404089 DE{I|L}T[RP]NV 5.4467 - 375 + 1 1.658 40456.1 1.0 1398 5095 6493 SUDHL4_400M_050219_2,6495 SUDHL4_400M_050219_2,6495,QGVVTTLENV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6496 32.771 256.0 264460.0 25 0 44913.0 41366 VPKFRGPL 8 86 457.28350165083503 912.55245036847 2 457.2837097048759 MULTI CID FTMS 0 0 0 6493 148290.15625 1.0 0 0.0 3 Unmodified _VPKFRGPL_ ENST00000308234.11_1_5:98105044-98106367:+|nuORF;ENST00000434027.2_1_5:98106187-98106367:+|nuORF 15.768221252438446 0.6779680726941459 6 {[TV]|[{I|L}S]}V 3 7 24.437 0.0 0.0 2.6779 0.0 0.0 0.0 610.3453025015357 610.3453025015357 7.155593552960937 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}V 2.6779 - 147 1 1.658 58257.4 1.0 1399 5095 6493 SUDHL4_400M_050219_2,6496 SUDHL4_400M_050219_2,6496,VPKFRGPL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6497 32.779 461.0 189120.0 25 0 14035.0 + 6395 DWAKLIKRL 9 108 381.5741796781509 1141.7007096346529 3 381.5737182497978 MULTI CID FTMS 0 0 0 6493 80930.0859375 0.5131880607254191 -7 0.1922683715820312 4 Unmodified _DWAKLIKRL_ REV__ENST00000585457.5_1_17:42254041-42254848:-|nuORF;REV__nc|ENSG00000267080|Q495Z4|ASB16-AS1 4.5288652416199255 0.7565837746943351 6 K{I|L}K[QP]E 6 -1 23.209 0.0 0.0 2.0329 0.0 0.0 400.2808399884781 0.0 400.2808399884781 0.0 10.947276103068308 0.0 0.0 0 0.0 0.0 0.0 0.0 K{I|L}K[QP]E 2.0329 - 52 1 1.658 72780.9 1.0 1400 5095 6493 SUDHL4_400M_050219_2,6497 SUDHL4_400M_050219_2,6497,DWAKLIKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6500 32.79 244.0 236100.0 25 0 41117.0 + -1 SVDLLIMM 8 62 469.2405402637018 936.4665275942036 2 469.2406494021416 MULTI CID FTMS 0 0 0 6499 191494.9375 0.181871005884846 -8 0.2261772155761718 1 Oxidation (M) _SVDLLIM(Oxidation (M))M_ REV__L1ME4a_dup26355|chr13:95619065-95619323:+|1.0406061103701636|0.0391026215980412|4.73|48.0|16|1|anti-sense 26.34127834903884 0.4900704351052977 6 VSD{M(Oxidation (M))|F}G 5 -1 60.701 0.0 0.0 6.4819 0.0 0.0 0.0 428.2263277643188 428.2263277643188 53.7113751626007 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 VSD{M(Oxidation (M))|F}G 6.4819 - 55 + 1 1.658 52310.2 1.0 1401 5097 6499 SUDHL4_400M_050219_2,6500 SUDHL4_400M_050219_2,6500,SVDLLIMM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6501 32.804 800.0 144240.0 25 0 8628.6 -1 AMRPGLEGY 9 145 505.2420311720845 1008.4695094109692 2 505.2419616580009 MULTI CID FTMS 0 0 0 6499 78901.296875 0.0964301678777019 -14 0.2575340270996094 2 Oxidation (M) _AM(Oxidation (M))RPGLEGY_ ENSG00000100297|ENST00000216122|MCM5 38.17557092003332 0.0854718145212029 6 {[QN]|[E{I|L}]|[KN]}G[QT]{I|L}EGY 9 -1 {[QN]|[E{I|L}]|[KN]}G[QT]{I|L} + + 40.049 -8.0058 -1.2483 3.9713 3.9713 54.077 0.0 0.0 0.0 0.0 25.356668758921828 0.0 0.0 0 1.5 0.0 0.2742275032520141 0.0 {[QN]|[E{I|L}]|[KN]}G[QT]{I|L}EGY 3.9713 - 613 + 1 1.658 90534.6 0.4399999976158142 1402 5097 6499 SUDHL4_400M_050219_2,6501 SUDHL4_400M_050219_2,6501,AMRPGLEGY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6503 32.815 498.0 175280.0 25 0 18250.0 + 38675 TTLEQPPSV 9 110 486.2549422934278 970.4953316536556 2 486.2547485232353 MULTI CID FTMS 0 0 0 6502 120944.875 0.7364128226961151 -2 0.0249977111816406 1 Unmodified _TTLEQPPSV_ chr18:79451041-79451676|45|16.2|0.83|4.28|+|ENST00000587635|NFATC1,NFATC1;ENSG00000131196|ENST00000427363|NFATC1;nc|ENSG00000131196|O95644-10|NFATC1;nc|ENSG00000131196|O95644-11|NFATC1;nc|ENSG00000131196|O95644-2|NFATC1;nc|ENSG00000131196|O95644-3|NFATC1;nc|ENSG00000131196|O95644-4|NFATC1;nc|ENSG00000131196|O95644-5|NFATC1;nc|ENSG00000131196|O95644-6|NFATC1;nc|ENSG00000131196|O95644-8|NFATC1 46.020951573049366 0.0490941689151868 6 [{I|L}T]SPSS 6 5 50.992 0.0 0.0 5.2542 0.0 0.0 0.0 395.1922963557872 395.1922963557872 27.591979406209923 0.0 0.0 0.0 0 0.0 2.0 1.336696871556164 0.0 [{I|L}T]SPSS 5.2542 - 568 1 1.658 70988.6 1.0 1403 5098 6502 SUDHL4_400M_050219_2,6503 SUDHL4_400M_050219_2,6503,TTLEQPPSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6506 32.836 800.0 89054.0 25 0 7317.9 + 18456 KYFDEHYEY 9 120 647.2746544532773 1292.5347559733543 2 647.2744628787041 MULTI CID FTMS 0 0 0 6505 99486.828125 1.0 0 0.0 1 Unmodified _KYFDEHYEY_ ENSG00000123975|ENST00000314355|CKS2 61.60191391372663 0.0251951588191061 6 KY{M(Oxidation (M))|F}YY{M(Oxidation (M))|F}D 7 5 53.193 0.0 0.0 4.1154 0.0 0.0 0.0 263.0785311334594 263.0785311334594 2.5804731824370464 0.0 0.0 0.0 0 0.75 0.0 0.4247425010840047 0.0 KY{M(Oxidation (M))|F}YY{M(Oxidation (M))|F}D 4.1154 - 793 + 1 1.658 59598.3 0.4799999892711639 1404 5100 6505 SUDHL4_400M_050219_2,6506 SUDHL4_400M_050219_2,6506,KYFDEHYEY True True KYFDEHYEY 32.835527 647.274462878704 413479.28125 6505.0 ENSG00000123975|ENST00000314355|CKS2 6.786895751953125 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6509 32.856 800.0 147250.0 25 0 7618.2 -1 0 63 851.4186051563777 4252.056643448888 5 851.6203491091728 MULTI CID FTMS 0 0 0 6508 41431.6484375 0.7369831287073235 1 -0.0163764953613281 1 6 D[WD]NQGYAE[EC] 11 -1 67.294 0.0 0.0 1.5826 0.0 0.0 2923.561755543524 0.0 2923.561755543524 0.0 60.30449511234619 0.0 0.0 0 1.0 0.0 0.805462187404089 0.4247425010840047 D[WD]NQGYAE[EC] 1.5826 - 329 1 1.658 88355.1 0.3799999952316284 1405 5102 6508 SUDHL4_400M_050219_2,6509 SUDHL4_400M_050219_2,6509, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6511 32.864 270.0 229500.0 25 0 14292.0 + -1 RVASVMQEY 9 92 549.7660548659412 1097.5175567986823 2 549.7660400271416 MULTI CID FTMS 0 0 0 6510 192874.359375 0.3414018930941668 6 -0.1204109191894531 1 Oxidation (M) _RVASVM(Oxidation (M))QEY_ ENST00000433579.1_1_7:42952135-42964395:-|nuORF;ENST00000429685.1_1_2:203044345-203044546:+|nuORF;ENSG00000106588|ENST00000223321|PSMA2;ENST00000411875.1_1_7:42961455-42966220:-|nuORF 14.40537977576856 0.4467465336100671 6 SV{M(Oxidation (M))|F}QEY 6 -1 43.761 0.0 0.0 3.9873 0.0 0.0 326.2064381330094 0.0 326.2064381330094 0.0 27.830918867322296 0.0 0.0 0 0.5 0.0 0.0 0.0 SV{M(Oxidation (M))|F}QEY 3.9873 + + 127 1 1.658 52732.0 1.0 1406 5103 6510 SUDHL4_400M_050219_2,6511 SUDHL4_400M_050219_2,6511,RVASVMQEY False False RVASVMQEY 32.863516 549.766040027142 5607301.0 6510.0 ENST00000433579.1_1_7:42952135-42964395:-|nuORF;;ENST00000429685.1_1_2:203044345-203044546:+|nuORF;;ENSG00000106588|ENST00000223321|PSMA2;;ENST00000411875.1_1_7:42961455-42966220:-|nuORF 7.106199900309245 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6512 32.877 800.0 109460.0 25 0 9137.8 + 20901 LMTKEISSV 9 139 512.2730110310087 1022.5314691288172 2 512.2731201052666 MULTI CID FTMS 0 0 0 6510 96000.3828125 0.5779108474486994 -4 0.0408897399902343 2 Oxidation (M) _LM(Oxidation (M))TKEISSV_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 43.77239144664712 0.0547478964384323 6 {I|L}{M(Oxidation (M))|F}[HN]{I|L}{[HG]|PP}SV 9 5 + 49.447 0.0 0.0 4.8358 4.8358 86.027 0.0 0.0 0.0 23.553884786631937 13.46787486224656 13.46787486224656 11.28862483739929 0 1.0 0.0 0.9604093769761876 0.0 {I|L}{M(Oxidation (M))|F}[HN]{I|L}{[HG]|PP}SV;{I|L}{M(Oxidation (M))|F}[R{I|L}]{[DS]|[MA]|[CV]|TT}SSV;[VS]{I|L}S[MT]{I|L}SSV;{[CA]|SS}[{I|L}A]{I|L}{M(Oxidation (M))|F}{I|L}SW;[VS][TA]{I|L}{M(Oxidation (M))|F}{I|L}SSV;[VS]{I|L}[TA]{M(Oxidation (M))|F}{I|L}SSV;[VS]{I|L}{M(Oxidation (M))|F}[TA]{I|L}SSV;[KT]E{I|L}{M(Oxidation (M))|F}{I|L}SSV;{I|L}TYSS{I|L}[PG]SV;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}[YG]{I|L}SSV 4.8358;3.7318;2.6384;2.6177;2.4661;2.4661;2.3809;2.3547;2.3389;2.2774 -;-;-;-;-;-;-;-;-;- 1518 + 1 1.658 70238.8 0.449999988079071 1407 5103 6510 SUDHL4_400M_050219_2,6512 SUDHL4_400M_050219_2,6512,LMTKEISSV True False LMTKEISSV 32.877347 512.273120105267 778160.0 6510.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 5.320367813110352 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6513 32.891 800.0 251240.0 25 0 31363.0 42605 VTRTGEQAPA 10 145 515.2675537572401 1028.52055458128 2 515.2676269412041 MULTI CID FTMS 0 0 0 6510 95287.15625 0.0606365460318793 -8 0.1111221313476562 3 Unmodified _VTRTGEQAPA_ ENSG00000105426|ENST00000262963|PTPRS;ENST00000588552.5_1_19:5159112-5286160:-|nuORF;nc|ENSG00000105426|Q13332-2|PTPRS;nc|ENSG00000105426|Q13332-3|PTPRS;nc|ENSG00000105426|Q13332-4|PTPRS;nc|ENSG00000105426|Q13332-5|PTPRS;nc|ENSG00000105426|Q13332-6|PTPRS;nc|ENSG00000105426|Q13332-7|PTPRS 27.628801355627647 0.3479284626772844 6 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K 9 9 + 81.213 0.0 0.0 7.8961 7.8961 90.906 0.0 0.0 0.0 27.147642715192504 8.162699622207171 8.162699622207171 8.162699622207171 0 0.7742275032520141 2.0 0.9604093769761876 0.5484550065040281 [VS]Y{M(Oxidation (M))|F}ATT{I|L}K;[VS]Y{M(Oxidation (M))|F}ATTK{I|L};{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}ATT{I|L}K;{[{M(Oxidation (M))|F}C]|[YS]}V{M(Oxidation (M))|F}ATTK{I|L};[VS]Y{M(Oxidation (M))|F}S{[DA]|[EG]}{I|L}K;[VS]Y{M(Oxidation (M))|F}S{[DA]|[EG]}K{I|L};[VS]{[TV]|[{I|L}S]}KTY[MT];[VS]{[TV]|[{I|L}S]}Q[VS][Y{M(Oxidation (M))|F}];[VS]{[TV]|[{I|L}S]}E[KG][Y{M(Oxidation (M))|F}];{[{M(Oxidation (M))|F}C]|[YS]}Y[PG]TT{I|L}K 7.8961;7.1024;5.1988;4.4051;4.0411;3.2474;3.2285;3.0978;3.0216;2.9845 -;-;-;-;-;-;-;-;-;- 763 + 1 1.658 154419.4 0.449999988079071 1408 5103 6510 SUDHL4_400M_050219_2,6513 SUDHL4_400M_050219_2,6513,VTRTGEQAPA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6515 32.905 654.0 155070.0 25 0 15808.0 + -1 NVISPTRSL 9 115 494.252910271888 493.245633805288 1 494.2536498904228 MULTI CID FTMS 0 0 0 6514 126278.859375 0.8578528350120974 -3 0.0556602478027343 1 ENST00000373768.3_1_9:124914566-124914674:-|nuORF 6 C(Carbamidomethyl (C)) 1 -1 18.539 0.0 0.0 3.7586 0.0 0.0 315.20435680509115 0.0 315.20435680509115 0.0 5.440228147639203 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 C(Carbamidomethyl (C)) 3.7586 - 54 + 1 1.658 81113.3 1.0 1409 5104 6514 SUDHL4_400M_050219_2,6515 SUDHL4_400M_050219_2,6515, False False NVISPTRSL 32.905114 494.253649890423 205113.421875 6514.0 ENST00000373768.3_1_9:124914566-124914674:-|nuORF -0.3473334113756816 2.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6516 32.919 800.0 142910.0 25 0 13462.0 -1 0 73 849.4108678620638 4242.017956977319 5 849.8138305544853 MULTI CID FTMS 0 0 0 6514 64174.3671875 1.0 0 0.0 2 6 V[W{M(Oxidation (M))|F}]K[PS]PQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 10 -1 30.903 0.0 0.0 0.72849 0.0 0.0 2960.414808069176 0.0 2960.414808069176 0.0 4.71726222832956 0.0 0.0 0 0.5 0.0 0.5 0.4247425010840047 V[W{M(Oxidation (M))|F}]K[PS]PQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 0.72849 - 170 + 1 1.658 84459.0 0.3799999952316284 1410 5104 6514 SUDHL4_400M_050219_2,6516 SUDHL4_400M_050219_2,6516, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6518 32.927 239.0 212020.0 25 0 22282.0 + 11871 GLTHPGVPSL 10 86 489.2747373971055 976.534921861011 2 489.2744628787041 MULTI CID FTMS 0 0 0 6517 84640.5 0.1512572604709159 13 -0.2064971923828125 1 Unmodified _GLTHPGVPSL_ REV__ENSG00000269743|ENST00000594199|SLC25A53 20.453626601364224 0.5043500229302764 6 [VP]T[HQ]VPS{I|L} 9 -1 [VP]T[HQ]V + + 24.397 15.194 2.2974 2.4984 2.4984 50.909 0.0 0.0 0.0 0.0 9.20330719266074 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.0 [VP]T[HQ]VPS{I|L} 2.4984 - 107 + 1 1.658 44291.4 1.0 1411 5105 6517 SUDHL4_400M_050219_2,6518 SUDHL4_400M_050219_2,6518,GLTHPGVPSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6519 32.929 100.0 381670.0 25 0 21922.0 + 10708 RLMGEGTSSL 10 92 533.7636720510266 1065.512791168853 2 533.7635375857353 MULTI CID FTMS 0 0 0 6517 407572.53125 0.935645635914536 -1 0.0277557373046875 2 Unmodified _FWEIQGSSL_ ENST00000567449.5_1_15:30918407-30918461:+|nuORF 34.40172386719151 0.1061884637610825 6 GTSS{I|L} 5 6 49.821 0.0 0.0 4.6757 0.0 0.0 602.28422743965 0.0 602.28422743965 0.0 32.830918867322296 0.0 0.0 0 0.5 0.0 0.6861818737241735 0.0 GTSS{I|L} 4.6757 - 142 1 1.658 35637.4 1.0 1412 5105 6517 SUDHL4_400M_050219_2,6519 SUDHL4_400M_050219_2,6519,FWEIQGSSL True False RLMGEGTSSL 32.92943 533.763537585735 2145291.5 6517.0 ENST00000567449.5_1_15:30918407-30918461:+|nuORF 6.3122483889261884 2.0 False 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6520 32.943 800.0 150330.0 25 0 16677.0 -1 0 65 852.4144041804243 4257.035638569121 5 853.0173217654228 MULTI CID FTMS 0 0 0 6517 104034.1640625 0.9756419450396928 -6 0.1038627624511718 3 6 V[PS]NY[PS]PQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 11 -1 26.687 0.0 0.0 0.62689 0.0 0.0 2975.435874682574 0.0 2975.435874682574 0.0 10.661163871268013 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 V[PS]NY[PS]PQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 0.62689 - 204 + 1 1.658 90351.0 0.4600000083446502 1413 5105 6517 SUDHL4_400M_050219_2,6520 SUDHL4_400M_050219_2,6520, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6522 32.948 37.0 1597600.0 25 0 233820.0 + 15962 ITAPPSRVL 9 61 477.2926588682337 952.5707648032676 2 477.2925292849541 MULTI CID FTMS 0 0 0 6521 1621112.125 0.8489689910124048 3 -0.0331192016601562 1 Unmodified _ITAPPSRVL_ ENSG00000099194|ENST00000370355|SCD 36.506200033944 0.094635877243972 6 {I|L}TAPP 5 4 60.618 0.0 0.0 6.3636 0.0 0.0 0.0 470.2708529108032 470.2708529108032 41.92085350219358 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + {I|L}TAPP 6.3636 + + 40 + 1 1.658 48763.3 1.0 1414 5106 6521 SUDHL4_400M_050219_2,6522 SUDHL4_400M_050219_2,6522,ITAPPSRVL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6523 32.951 138.0 404130.0 25 0 39918.0 + -1 ILIAAQTMK 9 87 502.7941792706 0 502.7941467165947 PEAK CID FTMS 0 0 0 6521 254411.828125 0.9031976111107844 -6 0.124114990234375 2 Oxidation (M) _ILIAAQTM(Oxidation (M))K_ REV__ENSG00000108509|ENST00000348066|CAMTA2;REV__ENSG00000171735|ENST00000303635|CAMTA1;REV__ENST00000574442.1_1_17:4872053-4872704:-|nuORF;REV__ENST00000574951.5_1_17:4872053-4885503:-|nuORF;REV__nc|ENSG00000108509|O94983-2|CAMTA2;REV__nc|ENSG00000108509|O94983-3|CAMTA2;REV__nc|ENSG00000108509|O94983-4|CAMTA2;REV__nc|ENSG00000108509|O94983-5|CAMTA2;REV__nc|ENSG00000108509|O94983-6|CAMTA2;REV__nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1 13.042465956692816 0.2773713495150148 6 T 1 -1 15.485 0.0 0.0 1.5429 0.0 0.0 293.1415679144438 606.3617490678059 899.5033169822498 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 T 1.5429 + + 21 + 1 1.658 48558.1 1.0 1415 5106 6521 SUDHL4_400M_050219_2,6523 SUDHL4_400M_050219_2,6523,ILIAAQTMK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6526 32.967 508.0 177220.0 25 0 15247.0 -1 MDNITRQNQFY 11 79 744.3303692585547 1486.6461855839093 2 744.3312255740166 MULTI CID FTMS 0 0 0 6525 143426.90625 0.4223196502088474 8 -0.1423606872558593 1 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 6 {[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y 13 -1 + 75.009 0.0 0.0 5.0455 5.0455 82.281 0.0 0.0 0.0 11.657524035901538 59.52491309145034 11.657524035901538 6.884354013288188 0 0.8182503180159344 0.0 0.0 1.4143943297944483 {[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AG{M(Oxidation (M))|F}EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A[W{M(Oxidation (M))|F}]AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}W{[MS]|[{M(Oxidation (M))|F}A]}AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}EAQQGGA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}Q{M(Oxidation (M))|F}EAQ[AG]NA{M(Oxidation (M))|F}Y 5.0455;4.5825;4.4353;4.4353;4.4353;4.1819;4.1656;3.9794;3.9705;3.9705 -;-;-;-;-;-;-;-;-;- 1521 1 1.658 66589.7 1.0 1416 5108 6525 SUDHL4_400M_050219_2,6526 SUDHL4_400M_050219_2,6526,MDNITRQNQFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6527 32.976 553.0 143530.0 25 0 12665.0 19754 LGQDNNFY 8 104 485.7167257525584 969.4188985719168 2 485.7167846560478 MULTI CID FTMS 0 0 0 6525 91994.734375 1.0 0 0.0 2 Unmodified _LGQDNNFY_ ENST00000395246.5_1_5:130694918-130695191:+|nuORF 20.871210003555333 0.6025813472596342 6 R{M(Oxidation (M))|F}Y 3 6 23.94 0.0 0.0 2.4695 0.0 0.0 485.1870698139074 0.0 485.1870698139074 0.0 8.9574211785316 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 R{M(Oxidation (M))|F}Y 2.4695 - 274 + 1 1.658 63763.8 1.0 1417 5108 6525 SUDHL4_400M_050219_2,6527 SUDHL4_400M_050219_2,6527,LGQDNNFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6530 32.997 800.0 137140.0 25 0 11455.0 -1 RAADCCRIQLQ 11 133 695.8388855999522 1389.6632182667042 2 695.8405639529228 MULTI CID FTMS 0 0 0 6529 121506.4375 0.3994898144227704 -7 0.124481201171875 1 2 Carbamidomethyl (C) _RAADC(Carbamidomethyl (C))C(Carbamidomethyl (C))RIQLQ_ ENSG00000104728|ENST00000349830|ARHGEF10;ENST00000523711.5_1_8:1824717-1874701:+|nuORF;nc|ENSG00000104728|O15013-4|ARHGEF10;nc|ENSG00000104728|O15013-6|ARHGEF10;nc|ENSG00000104728|O15013-7|ARHGEF10;nc|ENSG00000104728|O15013|ARHGEF10 34.93206674587334 0.2904649469012649 6 {[QV]|[N{I|L}]|[RA]|[KV]}NADQR{[MG]|[TS]}M{I|L}Q 12 -1 {[QV]|[N{I|L}]|[RA]|[KV]} + + 77.727 27.218 11.984 5.5932 5.5932 59.474 0.0 0.0 0.0 0.0 56.22872192056825 0.0 0.0 0 2.6549471895720984 0.0 1.055462187404089 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}NADQR{[MG]|[TS]}M{I|L}Q 5.5932 - 1850 + 1 1.658 82094.5 0.5099999904632568 1418 5110 6529 SUDHL4_400M_050219_2,6530 SUDHL4_400M_050219_2,6530,RAADCCRIQLQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6531 33.011 800.0 43570.0 25 0 12339.0 -1 0 29 1188.8157494146556 3563.425418844167 3 1189.149584949017 MULTI CID FTMS 0 0 0 6529 109872.890625 0.373083414288117 7 -0.1211204528808593 2 6 G 1 -1 6.9897 0.0 0.0 0.19615 0.0 0.0 2147.755205076392 1355.6303278885398 3503.385532964932 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19615 - 1 + 1 1.658 41342.8 0.3799999952316284 1419 5110 6529 SUDHL4_400M_050219_2,6531 SUDHL4_400M_050219_2,6531, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6532 33.025 800.0 137490.0 25 0 7461.1 35396 STFSEIFNKEY 11 99 682.8239862303526 1363.633419527505 2 683.3245117068291 MULTI CID FTMS 0 0 0 6529 87961.359375 0.449735049447051 -7 0.124481201171875 3 Unmodified _STFSEIFNKEY_ ENSG00000007350|ENST00000369915|TKTL1;nc|ENSG00000007350|P51854-1|TKTL1;nc|ENSG00000007350|P51854-4|TKTL1 16.149105407346934 0.6992268271266642 6 {[CP]|[EA]}TMT{I|L} 6 10 28.21 0.0 0.0 2.0687 0.0 0.0 0.0 714.3179647758051 714.3179647758051 4.5742365032697805 0.0 0.0 0.0 0 0.0 0.0 1.5189301784845295 0.0 {[CP]|[EA]}TMT{I|L} 2.0687 - 640 1 1.658 80843.2 0.4600000083446502 1420 5110 6529 SUDHL4_400M_050219_2,6532 SUDHL4_400M_050219_2,6532,STFSEIFNKEY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6534 33.035 388.0 131370.0 25 0 8597.8 + 29241 QGVVTTLENV 10 97 530.2877718788941 1058.560990824588 2 530.2880126833916 MULTI CID FTMS 0 0 0 6533 137400.828125 0.1651371255601719 8 -0.1049728393554687 1 Unmodified _QGVVTTLENV_ ENSG00000115414|ENST00000354785|FN1;ENST00000492816.6_1_2:216226280-216244056:-|nuORF;nc|ENSG00000115414|P02751-1|FN1;nc|ENSG00000115414|P02751-10|FN1;nc|ENSG00000115414|P02751-11|FN1;nc|ENSG00000115414|P02751-12|FN1;nc|ENSG00000115414|P02751-13|FN1;nc|ENSG00000115414|P02751-14|FN1;nc|ENSG00000115414|P02751-17|FN1;nc|ENSG00000115414|P02751-3|FN1;nc|ENSG00000115414|P02751-4|FN1;nc|ENSG00000115414|P02751-5|FN1;nc|ENSG00000115414|P02751-6|FN1;nc|ENSG00000115414|P02751-7|FN1;nc|ENSG00000115414|P02751-8|FN1;nc|ENSG00000115414|P02751-9|FN1 24.99096001346401 0.4071966087057876 6 [DV]DKK{I|L}ED 8 7 49.659 0.0 0.0 4.6911 0.0 0.0 0.0 113.06969378773184 113.06969378773184 35.67918449261214 0.0 0.0 0.0 0 0.3494850021680094 2.0 1.0044321917401078 0.0 [DV]DKK{I|L}ED 4.6911 - 139 1 1.658 47590.1 1.0 1421 5111 6533 SUDHL4_400M_050219_2,6534 SUDHL4_400M_050219_2,6534,QGVVTTLENV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6535 33.039 209.0 215900.0 25 0 17170.0 + 16764 KFSPNTSQF 9 85 528.261206454241 1054.507859975282 2 528.2621337771416 MULTI CID FTMS 0 0 0 6533 169354.46875 0.9145655126837094 -1 0.0440750122070312 2 Unmodified _KFSPNTSQF_ ENSG00000154473|ENST00000368865|BUB3;nc|ENSG00000154473|O43684-2|BUB3 31.26834338654808 0.1333407332142048 6 {[QS]|[NT]}V{[NV]|[RG]}{M(Oxidation (M))|F}SQ{M(Oxidation (M))|F} 9 5 + 45.181 0.0 0.0 4.2846 4.2846 82.631 0.0 0.0 0.0 1.038398967110723 28.191446804494905 1.038398967110723 9.208187539523747 0 0.3807196863200844 0.0 1.25 0.0 {[QS]|[NT]}V{[NV]|[RG]}{M(Oxidation (M))|F}SQ{M(Oxidation (M))|F};{[QS]|[NT]}V{[NV]|[RG]}{M(Oxidation (M))|F}S[AG]{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[SG]{[NV]|[RG]}{M(Oxidation (M))|F}SQ{M(Oxidation (M))|F} 4.2846;3.4114;2.355 -;-;- 204 1 1.658 40136.5 1.0 1422 5111 6533 SUDHL4_400M_050219_2,6535 SUDHL4_400M_050219_2,6535,KFSPNTSQF False True KFSPNTSQF 33.039325 528.262133777142 834979.5625 6533.0 nc|ENSG00000154473|O43684-2|BUB3;;ENSG00000154473|ENST00000368865|BUB3 6.810081164042155 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6536 33.049 577.0 175580.0 25 0 8901.0 + 38207 TPRHIIVRF 9 130 380.2324697889048 1137.6755799669145 3 380.2320434451103 MULTI CID FTMS 0 0 0 6533 95599.8046875 0.761935844532093 -6 0.1055831909179687 3 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 20.580933911654288 0.2795815587326093 6 T[RP]H{I|L}{I|L}[RV]{M(Oxidation (M))|F} 9 0 + 41.348 0.0 0.0 3.6344 3.6344 77.481 0.0 0.0 0.0 13.46787486224656 6.532125137753432 6.532125137753432 6.532125137753432 0 0.8494850021680094 0.0 0.0 0.0 + + T[RP]H{I|L}{I|L}[RV]{M(Oxidation (M))|F};T[RP]H{I|L}{I|L}{M(Oxidation (M))|F}[RV];T[RP]H{M(Oxidation (M))|F}{I|L}{I|L}[RV] 3.6344;3.0603;1.2182 +;-;- + 71 + 1 1.658 86162.1 1.0 1423 5111 6533 SUDHL4_400M_050219_2,6536 SUDHL4_400M_050219_2,6536,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 6537 33.062 706.0 301230.0 25 0 52478.0 + 14796 ILDQKINEV 9 171 536.30576863163 1070.59698433006 2 536.3041259646416 MULTI CID FTMS 0 0 0 6533 90000.9765625 0.008858624536539 -15 0.2457733154296875 4 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 117.7605887643192 0.0024069341015653 6 {I|L}{I|L}V{M(Oxidation (M))|F}N{I|L}DQ 8 6 92.693 0.0 0.0 8.6581 0.0 0.0 0.0 125.07222925357657 125.07222925357657 44.223655890753705 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.8882104921644447 2.0158715643802765 {I|L}{I|L}V{M(Oxidation (M))|F}N{I|L}DQ 8.6581 - 12113 + 1 1.658 162372.2 1.0 1424 5111 6533 SUDHL4_400M_050219_2,6537 SUDHL4_400M_050219_2,6537,ILDQKINEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6539 33.066 68.0 654020.0 25 0 66344.0 + -1 AMRPGLEGY 9 63 505.2420311720845 1008.4695094109692 2 505.2422057986259 MULTI CID FTMS 0 0 0 6538 793472.6875 0.9697521776253606 1 -0.0238189697265625 1 Oxidation (M) _AM(Oxidation (M))RPGLEGY_ ENSG00000100297|ENST00000216122|MCM5 26.268140514670165 0.1969607489560049 6 {I|L}EGY 4 -1 38.928 0.0 0.0 3.8601 0.0 0.0 528.24809462715 0.0 528.24809462715 0.0 22.730012720637376 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}EGY 3.8601 + + 118 1 1.658 38549.7 1.0 1425 5112 6538 SUDHL4_400M_050219_2,6539 SUDHL4_400M_050219_2,6539,AMRPGLEGY False False AMRPGLEGY 33.066465 505.242205798626 18101776.5 6538.0 ENSG00000100297|ENST00000216122|MCM5 6.906086444854736 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6540 33.07 174.0 273940.0 25 0 45725.0 + + -1 VSDFGGRSL 9 72 469.2405402637018 936.4665275942036 2 469.2402526736259 MULTI CID FTMS 0 0 0 6538 215718.546875 0.2048772130499458 7 -0.0678215026855468 2 Oxidation (M) _SVDLLIM(Oxidation (M))M_ ENSG00000132383|ENST00000254719|RPA1 34.18733598223924 0.3315367612694167 6 VSD{M(Oxidation (M))|F}G 5 -1 60.433 0.0 0.0 6.4533 0.0 0.0 0.0 428.22687708072505 428.22687708072505 49.83711824324517 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 VSD{M(Oxidation (M))|F}G 6.4533 - 57 + 1 1.658 44305.1 1.0 1426 5112 6538 SUDHL4_400M_050219_2,6540 SUDHL4_400M_050219_2,6540,SVDLLIMM False False VSDFGGRSL 33.069846 469.240252673626 9443744.0 6538.0 ENSG00000132383|ENST00000254719|RPA1 5.233127276102702 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6541 33.076 316.0 260550.0 25 0 18919.0 + 31614 RQYAKDIGF 9 101 549.2907141702171 1096.5668754072342 2 549.2909423708916 MULTI CID FTMS 0 0 0 6538 183604.8125 0.1905573943101011 -13 0.2465972900390625 3 Unmodified _RQYAKDIGF_ ENSG00000213741|ENST00000245458|RPS29;ENST00000401543.2_1_9:90140306-90140387:+|nuORF;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50050387-50052826:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 47.74868867922204 0.0453060283459952 6 GDKA[QP]G{M(Oxidation (M))|F} 8 6 49.646 0.0 0.0 4.5274 0.0 0.0 278.16579970996423 0.0 278.16579970996423 0.0 22.47933455448525 0.0 0.0 0 1.3494850021680094 0.0 0.4247425010840047 0.3054621874040891 GDKA[QP]G{M(Oxidation (M))|F} 4.5274 - 347 + 1 1.658 64286.1 1.0 1427 5112 6538 SUDHL4_400M_050219_2,6541 SUDHL4_400M_050219_2,6541,RQYAKDIGF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6542 33.085 564.0 236400.0 25 0 21885.0 + 14862 ILHDDEVTV 9 145 520.766508779972 1039.518464626744 2 520.7663452029228 MULTI CID FTMS 0 0 0 6538 111104.0703125 0.0545362497847897 -19 0.3951187133789062 4 Unmodified _ILHDDEVTV_ ENSG00000137818|ENST00000260379|RPLP1;ENST00000487304.6_1_15:69745218-69746066:+|nuORF;nc|ENSG00000137818|P05386-2|RPLP1 42.09456458481378 0.0639583784996157 6 [{M(Oxidation (M))|F}V]VTAC(Carbamidomethyl (C)) 6 8 35.908 0.0 0.0 3.4543 0.0 0.0 0.0 359.1858309381469 359.1858309381469 5.827410568138447 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.0 [{M(Oxidation (M))|F}V]VTAC(Carbamidomethyl (C)) 3.4543 - 500 + 1 1.658 103847.1 1.0 1428 5112 6538 SUDHL4_400M_050219_2,6542 SUDHL4_400M_050219_2,6542,ILHDDEVTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6548 33.112 420.0 226110.0 25 0 24366.0 + 31616 RQYAKDIGF 9 132 366.52959692273055 1096.5669613683915 3 366.5295898318291 MULTI CID FTMS 0 0 0 6547 120324.15625 0.3874090180082465 -8 0.1251907348632812 1 Unmodified _RQYAKDIGF_ ENSG00000213741|ENST00000245458|RPS29;ENST00000401543.2_1_9:90140306-90140387:+|nuORF;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50050387-50052826:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 43.85829265575387 0.0542763391141878 6 {[{M(Oxidation (M))|F}H]|[RQ]}YAKDG{I|L}{M(Oxidation (M))|F} 9 2 + 47.783 0.0 0.0 4.3575 4.3575 80.366 0.0 0.0 0.0 8.89506772603255 32.29872819733373 8.89506772603255 7.257724967479859 0 0.7429928190999391 0.0 0.4247425010840047 0.3252574989159953 {[{M(Oxidation (M))|F}H]|[RQ]}YAKDG{I|L}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YAKGD{I|L}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}Y[KQ]D{I|L}{M(Oxidation (M))|F} 4.3575;3.6957;1.5346 -;-;- 238 1 1.658 77800.4 1.0 1429 5117 6547 SUDHL4_400M_050219_2,6548 SUDHL4_400M_050219_2,6548,RQYAKDIGF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6549 33.125 800.0 89107.0 25 0 5798.2 + + -1 RFNPNASSSF 10 112 564.2607207840139 1126.5068886348276 2 564.2600585818291 MULTI CID FTMS 0 0 0 6547 89620.4921875 1.0 0 0.0 2 Carbamidomethyl (C) _HLYTC(Carbamidomethyl (C))LSSF_ ENST00000534096.5_1_19:50838046-50848012:-|nuORF;chr19:50337135-50361969|12|40.75|0.1|8.63|-|2|NAPSB,None|1;chr19:50337135-50337313|10|14.4|0.0|12.96|-|2|NAPSB,None|1 36.04419817259434 0.0971720506436186 6 ASSS{M(Oxidation (M))|F} 5 -1 42.792 0.0 0.0 3.7986 0.0 0.0 629.2926086140121 0.0 629.2926086140121 0.0 22.34636880228201 0.0 0.0 0 0.0 0.0 1.2614393726401687 0.0 ASSS{M(Oxidation (M))|F} 3.7986 - 132 1 1.658 58527.8 0.4799999892711639 1430 5117 6547 SUDHL4_400M_050219_2,6549 SUDHL4_400M_050219_2,6549,HLYTCLSSF False False RFNPNASSSF 33.125431 564.260058581829 0.0 6547.0 ENST00000534096.5_1_19:50838046-50848012:-|nuORF;;chr19:50337135-50361969|12|40.75|0.1|8.63|-|2|NAPSB,None|1;;chr19:50337135-50337313|10|14.4|0.0|12.96|-|2|NAPSB,None|1 5.907859007517497 2.0 False 10.0 True non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_2 6552 33.141 498.0 158410.0 25 0 9594.8 + -1 GMQGAGIQGV 10 111 467.2270042902071 932.439455647214 2 467.2272216677666 MULTI CID FTMS 0 0 0 6551 88417.1328125 0.6437303117908164 -2 0.0279273986816406 1 Oxidation (M) _GM(Oxidation (M))QGAGIQGV_ ENSG00000177613|ENST00000331173|CSTF2T 26.88365393820708 0.3646707531412818 6 [VG]EEC{I|L}QGV 9 -1 [VG]EEC{I|L} + + 21.044 12.735 2.0205 2.2569 2.2569 50.572 0.0 0.0 0.0 0.0 9.361818737241734 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 [VG]EEC{I|L}QGV 2.2569 - 413 + 1 1.658 62910.3 1.0 1431 5119 6551 SUDHL4_400M_050219_2,6552 SUDHL4_400M_050219_2,6552,GMQGAGIQGV False False GMQGAGIQGV 33.140819 467.227221667767 523671.59375 6551.0 ENSG00000177613|ENST00000331173|CSTF2T 4.789167563120524 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6553 33.146 284.0 129600.0 25 0 13518.0 + -1 VDALSPLMFP 10 65 553.2833137783014 1104.5520746234026 2 553.2830078005791 MULTI CID FTMS 0 0 0 6551 87660.84375 0.3369471271177233 -19 0.3103523254394531 2 Oxidation (M) _VDALSPLM(Oxidation (M))FP_ REV__ENSG00000130348|ENST00000369046|QRSL1;REV__nc|ENSG00000130348|Q9H0R6-2|QRSL1 10.823927491677226 0.6659270209832991 6 [YV]{M(Oxidation (M))|F}AT[{I|L}T]KY 9 -1 + 58.139 0.0 0.0 5.2636 5.2636 90.448 0.0 0.0 0.0 40.17992158002109 7.113037394097432 7.113037394097432 41.24609797921465 0 0.8807196863200843 2.0 0.0 0.0 [YV]{M(Oxidation (M))|F}AT[{I|L}T]KY;[{I|L}T][PG][KG]AA{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};YY[KQ]{I|L}{NN|[MP]|[D{I|L}]|[EV]}Y;YY[PG]T[{I|L}T]KY;[{I|L}T][PG][KQ]A{M(Oxidation (M))|F}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 5.2636;1.5294;1.3278;1.2305;0.61763 -;-;-;-;- 112 + 1 1.658 38816.6 1.0 1432 5119 6551 SUDHL4_400M_050219_2,6553 SUDHL4_400M_050219_2,6553,VDALSPLMFP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6556 33.165 706.0 126110.0 25 0 9140.8 + 2382 AQMPTVHY 8 127 481.723493177423 961.432433421646 2 481.7235290408134 MULTI CID FTMS 0 0 0 6555 109847.75 0.4165756712075514 -17 0.258941650390625 1 Oxidation (M) _AQM(Oxidation (M))PTVHY_ ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A;ENSG00000077080|ENST00000160382|ACTL6B 40.44857923139169 0.2267865117615937 6 [QA]{M(Oxidation (M))|F}[TP]VHY 8 0 + 40.34 0.0 0.0 4.1958 4.1958 80.776 0.0 0.0 0.0 9.692737604564028 8.692317197309762 8.692317197309762 8.692317197309762 0 0.9247425010840048 0.744727494896694 0.0 0.0 + + [QA]{M(Oxidation (M))|F}[TP]VHY;[QA]{M(Oxidation (M))|F}[TP]VYH;[QA]{M(Oxidation (M))|F}[TP][RN]E;[QA]{M(Oxidation (M))|F}[TP]{[WN]|[YH]}V 4.1958;3.2917;1.7226;1.6796 +;-;-;- + 172 + 1 1.658 70313.1 1.0 1433 5121 6555 SUDHL4_400M_050219_2,6556 SUDHL4_400M_050219_2,6556,AQMPTVHY False False AQMPTVHY 33.164927 481.7243 3574063.25 6555.0 ENSG00000136518|ENST00000429709|ACTL6A;;nc|ENSG00000136518|O96019-2|ACTL6A;;ENSG00000077080|ENST00000160382|ACTL6B 7.271472295125325 2.0 True 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6557 33.179 800.0 73930.0 25 0 5115.9 + 42013 VQQPGQTNFY 10 103 591.2827078756054 1180.5508628180107 2 591.2839233279228 MULTI CID FTMS 0 0 0 6555 94037.4453125 0.9145367883061276 -4 0.0485572814941406 2 Unmodified _VQQPGQTNFY_ ENSG00000117523|ENST00000647382|PRRC2C;nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C 47.74868867922204 0.0933642699623533 6 YTN{M(Oxidation (M))|F}[HA]{M(Oxidation (M))|F}Y 8 8 30.909 0.0 0.0 2.6182 0.0 0.0 119.07390792060704 0.0 119.07390792060704 0.0 -2.048377692357235 -2.048377692357235 0.0 0 0.7429928190999391 0.0 0.7059771852360797 0.3054621874040891 YTN{M(Oxidation (M))|F}[HA]{M(Oxidation (M))|F}Y 2.6182 - 577 1 1.658 52066.5 0.5 1434 5121 6555 SUDHL4_400M_050219_2,6557 SUDHL4_400M_050219_2,6557,VQQPGQTNFY True True VQQPGQTNFY 33.178758 591.283923327923 536316.0625 6555.0 nc|ENSG00000117523|Q9Y520|PRRC2C;;nc|ENSG00000117523|Q9Y520-4|PRRC2C;;ENSG00000117523|ENST00000647382|PRRC2C;;nc|ENSG00000117523|Q9Y520-6|PRRC2C;;nc|ENSG00000117523|Q9Y520-2|PRRC2C;;nc|ENSG00000117523|Q9Y520-3|PRRC2C;;nc|ENSG00000117523|Q9Y520-5|PRRC2C 6.279918352762858 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6561 33.199 566.0 213440.0 25 0 50575.0 -1 0 115 399.78131595401385 797.5480789748277 2 399.7813293337822 MULTI CID FTMS 0 0 0 6560 78075.9375 0.576396939485277 -2 0.0081329345703125 1 6 [VG]{I|L}KR{I|L}{I|L} 7 -1 + 30.186 0.0 0.0 3.7848 3.7848 82.968 0.0 0.0 0.0 16.690779888348306 3.107490131087829 3.107490131087829 11.853167406967966 0 0.2887254899964357 1.6989700043360187 0.0 0.0 [VG]{I|L}KR{I|L}{I|L};{I|L}[VG]KR{I|L}{I|L} 3.7848;2.2986 -;- 32 + 1 1.658 97270.3 1.0 1435 5124 6560 SUDHL4_400M_050219_2,6561 SUDHL4_400M_050219_2,6561, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6562 33.205 315.0 237660.0 25 0 96319.0 -1 0 80 488.2677430061139 487.2604665395139 1 488.2668029665947 MULTI CID FTMS 0 0 0 6560 126608.5546875 0.7428260851629085 6 -0.1048164367675781 2 6 [{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 4 -1 + 24.437 0.0 0.0 5.0152 5.0152 88.72 0.0 0.0 0.0 14.058371422636531 1.5051499783199065 1.5051499783199065 24.436974992327123 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}P]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 5.0152 - 27 1 1.658 63211.3 1.0 1436 5124 6560 SUDHL4_400M_050219_2,6562 SUDHL4_400M_050219_2,6562, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6564 33.21 89.0 647860.0 25 0 96031.0 + 15963 ITAPPSRVL 9 58 477.2926588682337 952.5707648032676 2 477.2925292849541 MULTI CID FTMS 0 0 0 6563 623788.75 0.3266753098231186 22 -0.4462966918945312 1 Unmodified _ITAPPSRVL_ ENSG00000099194|ENST00000370355|SCD 29.84058131909904 0.1515068451768857 6 {I|L}TAPP 5 4 58.778 0.0 0.0 6.1704 0.0 0.0 0.0 470.2723177545532 470.2723177545532 37.35095685508323 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + {I|L}TAPP 6.1704 + + 39 + 1 1.658 50355.6 1.0 1437 5125 6563 SUDHL4_400M_050219_2,6564 SUDHL4_400M_050219_2,6564,ITAPPSRVL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6565 33.216 323.0 206030.0 25 0 20907.0 + 35884 SVLPQKAR 8 90 449.77663867070754 0 449.7770568728447 PEAK CID FTMS 0 0 0 6563 96161.734375 0.7130465359720961 -5 0.059051513671875 2 Unmodified _SVLPQKAR_ REV__ENSG00000163354|ENST00000368424|DCST2;REV__nc|ENSG00000163354|Q5T1A1-2|DCST2 8.593279151180031 0.5573742999696857 6 TA{I|L}C(Carbamidomethyl (C)) 4 -1 24.117 0.0 0.0 2.687 0.0 0.0 126.11610100163666 323.1976107233032 449.3137117249398 0.0 0.0 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 TA{I|L}C(Carbamidomethyl (C)) 2.687 - 63 + 1 1.658 59108.3 1.0 1438 5125 6563 SUDHL4_400M_050219_2,6565 SUDHL4_400M_050219_2,6565,SVLPQKAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6566 33.23 800.0 130320.0 25 0 12970.0 -1 0 69 852.4144041804243 4257.035638569121 5 852.8181640505791 MULTI CID FTMS 0 0 0 6563 61043.59375 0.6368796793488122 14 -0.1707077026367187 3 6 V[PS]NY[PS]PQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 11 -1 32.484 0.0 0.0 0.76306 0.0 0.0 2975.434960966394 0.0 2975.434960966394 0.0 16.017832630189844 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.3807196863200844 V[PS]NY[PS]PQ{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]} 0.76306 - 153 + 1 1.658 76802.2 0.3700000047683716 1439 5125 6563 SUDHL4_400M_050219_2,6566 SUDHL4_400M_050219_2,6566, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6569 33.25 800.0 117690.0 25 0 9409.3 + -1 DLMPKEWTNIQ 11 124 695.8388855999522 1389.6632182667042 2 695.8380615115166 MULTI CID FTMS 0 0 0 6568 124320.359375 0.4087414487457989 10 -0.1290321350097656 1 Oxidation (M) _DLM(Oxidation (M))PKEWTNIQ_ REV__ENSG00000196090|ENST00000373187|PTPRT;REV__nc|ENSG00000196090|O14522-1|PTPRT 34.93206674587334 0.2904649469012649 6 {[QV]|[N{I|L}]|[RA]|[KV]}NA[PG]Q[EC]G{M(Oxidation (M))|F}{I|L}Q 13 -1 + 90.429 0.0 0.0 6.5073 6.5073 86.798 0.0 0.0 0.0 28.62282448603885 63.51890285962236 28.62282448603885 6.642078980768062 0 2.4247425010840047 2.0 0.0 1.2249073637206092 {[QV]|[N{I|L}]|[RA]|[KV]}NA[PG]Q[EC]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NA[PG]Q{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}N[QP]Q[EC]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NHQQQ[HM]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}N[QP]Q{[C(Carbamidomethyl (C))E]|[WC]}{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NH[HT]{[WN]|[YH]}N{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NHQQQDA[WH];{[QV]|[N{I|L}]|[RA]|[KV]}NA[PG]Q[PA]DA[WH];{[QV]|[N{I|L}]|[RA]|[KV]}N[QP]Q[PA]DA[WH];{[QV]|[N{I|L}]|[RA]|[KV]}NA[PG]Q[PA]W[WH] 6.5073;6.0293;5.6695;5.6261;5.1937;4.8174;4.6917;4.3696;4.2514;4.2514 -;-;-;-;-;-;-;-;-;- 1121 1 1.658 73179.8 0.5899999737739563 1440 5127 6568 SUDHL4_400M_050219_2,6569 SUDHL4_400M_050219_2,6569,DLMPKEWTNIQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6570 33.254 178.0 479050.0 25 0 72456.0 + 14821 ILFGHENRV 9 95 362.2012835652839 1083.5820212960518 3 362.2010681033134 MULTI CID FTMS 0 0 0 6568 283920.8125 0.4177422806243642 -6 0.0838584899902343 2 Unmodified _ILFGHENRV_ ENSG00000069966|ENST00000261837|GNB5;nc|ENSG00000069966|O14775-2|GNB5;nc|ENSG00000069966|O14775-3|GNB5 18.721224879955976 0.3299216912490967 6 {I|L}{I|L}{M(Oxidation (M))|F}GHVH 7 4 66.859 0.0 0.0 6.1702 0.0 0.0 0.0 277.1081637018188 277.1081637018188 50.07613332627761 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F}GHVH 6.1702 - 426 + 1 1.658 75940.5 1.0 1441 5127 6568 SUDHL4_400M_050219_2,6570 SUDHL4_400M_050219_2,6570,ILFGHENRV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6571 33.262 472.0 216330.0 25 0 16783.0 + -1 ILFGHENRV 9 99 542.7988888193026 1083.5832247054052 2 542.7981445193291 MULTI CID FTMS 0 0 0 6568 112807.3828125 0.4816230458942875 -8 0.1044883728027343 3 Oxidation (M) _LLVLM(Oxidation (M))WFF_ nc|ENSG00000069966|O14775-2|GNB5;ENSG00000069966|ENST00000261837|GNB5;nc|ENSG00000069966|O14775-3|GNB5 17.086550045450526 0.6584923310065985 6 {I|L}{I|L}{M(Oxidation (M))|F}GHE 6 -1 63.633 0.0 0.0 5.8725 0.0 0.0 0.0 384.2002352350219 384.2002352350219 46.18562527100117 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F}GHE 5.8725 - 136 + 1 1.658 81658.3 1.0 1442 5127 6568 SUDHL4_400M_050219_2,6571 SUDHL4_400M_050219_2,6571,LLVLMWFF False False ILFGHENRV 33.262168 542.798144519329 6776464.875 6568.0 nc|ENSG00000069966|O14775-2|GNB5;;ENSG00000069966|ENST00000261837|GNB5;;nc|ENSG00000069966|O14775-3|GNB5 5.010925531387329 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6572 33.272 534.0 178320.0 25 0 13808.0 + 18232 KVFSGALQEA 10 123 525.2849165493574 1048.555280165515 2 525.2850829958916 MULTI CID FTMS 0 0 0 6568 128920.9140625 0.5232075442385073 -5 0.0552024841308593 4 Unmodified _KVFSGALQEA_ BTG2|p.L46V|1|0.63|ENSG00000159388|chr1:203305742-203305742|C/G|missense_variant;ENSG00000159388|ENST00000290551|BTG2 47.594388314883695 0.0942698883389255 6 A{I|L}QEA 5 5 28.447 0.0 0.0 2.713 0.0 0.0 518.2836170880875 0.0 518.2836170880875 0.0 6.184151806525389 0.0 0.0 0 0.8129529932484498 0.0 0.0 0.3494850021680094 + A{I|L}QEA 2.713 + + 942 1 1.658 78017.8 1.0 1443 5127 6568 SUDHL4_400M_050219_2,6572 SUDHL4_400M_050219_2,6572,KVFSGALQEA True True KVFSGALQEA 33.27157 525.285082995892 1085387.375 6568.0 BTG2|p.L46V|1|0.63|ENSG00000159388|chr1:203305742-203305742|C/G|missense_variant;;ENSG00000159388|ENST00000290551|BTG2;;BTG2|p.R34S|1|0.26|ENSG00000159388|chr1:203305708-203305708|G/T|missense_variant 4.120664993921916 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6575 33.284 347.0 212220.0 25 0 13943.0 + 12110 GQIEVVKY 8 101 468.26342884014434 934.5123047470888 2 468.2634460330009 MULTI CID FTMS 0 0 0 6574 110586.890625 0.3965791997837562 -9 0.1296043395996093 1 Unmodified _GQIEVVKY_ ENSG00000139645|ENST00000267116|ANKRD52 46.020951573049366 0.1579632664462935 6 {[QG]|[NA]}{I|L}EVVKY 8 0 + 51.011 0.0 0.0 5.4586 5.4586 90.641 0.0 0.0 0.0 34.35586613927775 13.399480616943508 13.399480616943508 26.958086469388807 0 0.805462187404089 0.0 0.4247425010840047 0.2614393726401688 + + {[QG]|[NA]}{I|L}EVVKY;{[QG]|[NA]}{I|L}EV[YK]V 5.4586;2.5739 +;- + 170 + 1 1.658 61490.8 1.0 1444 5129 6574 SUDHL4_400M_050219_2,6575 SUDHL4_400M_050219_2,6575,GQIEVVKY False True GQIEVVKY 33.284476 468.263446033001 1184855.5 6574.0 ENSG00000139645|ENST00000267116|ANKRD52 4.432830174763997 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6576 33.292 406.0 199200.0 25 0 25430.0 -1 RMVGQVLGA 9 94 473.760870263534 945.507187593868 2 473.7602416872978 MULTI CID FTMS 0 0 0 6574 115033.03125 0.5839421257432714 -7 0.0968818664550781 2 Oxidation (M) _RM(Oxidation (M))VGQVLGA_ ENSG00000130741|ENST00000253039|EIF2S3 16.942295170755138 0.3780752226737986 6 DV{I|L}Q 4 -1 26.37 0.0 0.0 2.789 0.0 0.0 472.2689686505875 0.0 472.2689686505875 0.0 10.885540741363188 0.0 0.0 0 1.1677353201839438 0.0 0.0 0.0 DV{I|L}Q 2.789 - 259 1 1.658 67177.9 1.0 1445 5129 6574 SUDHL4_400M_050219_2,6576 SUDHL4_400M_050219_2,6576,RMVGQVLGA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6579 33.301 7.6 6262700.0 25 0 1352000.0 + 14797 ILDQKINEV 9 66 536.30576863163 1070.59698433006 2 536.3060790896416 MULTI CID FTMS 0 0 0 6578 7787918.5 0.7665499703190084 5 -0.0631523132324218 1 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 62.57269311338072 0.0246576765497938 6 {I|L}{I|L}[C(Carbamidomethyl (C))S]{I|L}{I|L}DQ 8 6 72.332 0.0 0.0 6.7562 0.0 0.0 0.0 125.07229028873282 125.07229028873282 50.61919338094107 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.4731975075880328 0.4247425010840047 {I|L}{I|L}[C(Carbamidomethyl (C))S]{I|L}{I|L}DQ 6.7562 - 724 + 1 1.658 42847.0 1.0 1446 5131 6578 SUDHL4_400M_050219_2,6579 SUDHL4_400M_050219_2,6579,ILDQKINEV True True ILDQKINEV 33.300588 536.306079089642 234516120.0 6578.0 ENST00000446285.5_1_2:10584646-10585158:-|nuORF;;ENSG00000115758|ENST00000234111|ODC1 5.520449320475261 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6580 33.314 800.0 121400.0 25 0 18328.0 + 14884 ILLDNDHYAM 10 97 610.783940559826 1219.5533281864518 2 610.7841674685478 MULTI CID FTMS 0 0 0 6578 102989.6328125 0.5402862821914388 -9 0.1170158386230468 2 Oxidation (M) _ILLDNDHYAM(Oxidation (M))_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 45.69961567697781 0.105390671673896 6 {I|L}{I|L}{I|L}DNDHYA{M(Oxidation (M))|F} 10 0 + 79.462 0.0 0.0 6.5157 6.5157 88.804 0.0 0.0 0.0 41.53766187970177 15.026975159433531 15.026975159433531 9.164539485499247 0 0.4247425010840047 2.0 0.6109243748081782 0.0 + + {I|L}{I|L}{I|L}DNDHYA{M(Oxidation (M))|F};{I|L}{I|L}{I|L}DGGDHYA{M(Oxidation (M))|F};{I|L}{I|L}[WY]YD[NS]{M(Oxidation (M))|F};{I|L}{I|L}[YE]T{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}AY{I|L}[MN]A{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}AY{I|L}D[NS]{M(Oxidation (M))|F};{I|L}[WY]Y{I|L}D[NS]{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}A{I|L}Y[MN]A{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}A{I|L}YD[NS]{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}A{I|L}Y{I|L}[MN]A{M(Oxidation (M))|F} 6.5157;5.7642;4.668;3.7831;3.075;2.9956;2.8512;2.8282;2.7487;2.6838 +;-;-;-;-;-;-;-;-;- + 854 + 1 1.658 77037.9 0.5299999713897705 1447 5131 6578 SUDHL4_400M_050219_2,6580 SUDHL4_400M_050219_2,6580,ILLDNDHYAM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6583 33.324 166.0 376080.0 25 0 33044.0 + 31615 RQYAKDIGF 9 85 549.2907141702171 1096.5668754072342 2 549.2903320193291 MULTI CID FTMS 0 0 0 6582 273400.84375 0.2837537408622289 8 -0.085723876953125 1 Unmodified _RQYAKDIGF_ ENSG00000213741|ENST00000245458|RPS29;ENST00000401543.2_1_9:90140306-90140387:+|nuORF;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;ENST00000557367.2_1_14:50050387-50052826:-|nuORF;nc|ENSG00000213741|P62273-2|RPS29 56.17704186161178 0.0281986971544335 6 {[{M(Oxidation (M))|F}H]|[RQ]}YAKD{I|L}G{M(Oxidation (M))|F} 9 0 + 63.338 0.0 0.0 5.776 5.776 82.649 0.0 0.0 0.0 5.642492736872597 29.973024840566467 5.642492736872597 4.247425010840047 0 1.548455006504028 0.0 0.4247425010840047 0.7742275032520141 + + {[{M(Oxidation (M))|F}H]|[RQ]}YAKD{I|L}G{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YAKDG{I|L}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YAKGD{I|L}{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}YAK{[TV]|[{I|L}S]}[MT];{[{M(Oxidation (M))|F}C]|[YS]}{[TV]|[{I|L}S]}KA{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[VA]|[{I|L}G]};{[{M(Oxidation (M))|F}H]|[RQ]}Y[KQ]D{I|L}{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[YN][WK]{I|L}G{M(Oxidation (M))|F};{[VA]|[{I|L}G]}[YN][WK]G{I|L}{M(Oxidation (M))|F} 5.776;5.3887;3.9521;2.8157;1.2663;1.2199;1.0705;0.68313 +;-;-;-;-;-;-;- + 322 1 1.658 50923.9 1.0 1448 5133 6582 SUDHL4_400M_050219_2,6583 SUDHL4_400M_050219_2,6583,RQYAKDIGF True True RQYAKDIGF 33.324126 549.290332019329 10444032.5 6582.0 ENSG00000213741|ENST00000245458|RPS29;;ENST00000401543.2_1_9:90140306-90140387:+|nuORF;;nc|ENSG00000213741|P62273-2|RPS29;;ENST00000554075.1_1_14:50052568-50053064:-|nuORF;;ENST00000557367.2_1_14:50050387-50052826:-|nuORF 7.568273067474365 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6584 33.33 300.0 207890.0 25 0 14686.0 -1 AMRPGLEGY 9 109 505.2420311720845 1008.4695094109692 2 505.2428161501884 MULTI CID FTMS 0 0 0 6582 126393.859375 0.1544737737017316 22 -0.426513671875 2 Oxidation (M) _AM(Oxidation (M))RPGLEGY_ ENSG00000100297|ENST00000216122|MCM5 32.78568957990786 0.1150597335874693 6 HEGY 4 -1 42.735 0.0 0.0 4.2376 0.0 0.0 504.2592003469834 0.0 504.2592003469834 0.0 26.704780657136524 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.0 HEGY 4.2376 - 212 1 1.658 49126.0 1.0 1449 5133 6582 SUDHL4_400M_050219_2,6584 SUDHL4_400M_050219_2,6584,AMRPGLEGY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6585 33.343 800.0 102330.0 25 0 6468.6 + -1 YVHQWYMPYLM 11 105 781.8465761127752 1561.6785992923503 2 781.8470336794853 MULTI CID FTMS 0 0 0 6582 92470.5625 0.7793299105644935 1 -0.0251388549804687 3 2 Oxidation (M) _YVHQWYM(Oxidation (M))PYLM(Oxidation (M))_ REV__ENSG00000119522|ENST00000394215|DENND1A;REV__ENST00000473039.5_1_9:126143713-126520026:-|nuORF;REV__ENST00000474676.1_1_9:126331853-126520026:-|nuORF;REV__nc|ENSG00000119522|Q8TEH3-2|DENND1A;REV__nc|ENSG00000119522|Q8TEH3-3|DENND1A;REV__nc|ENSG00000119522|Q8TEH3-4|DENND1A;REV__nc|ENSG00000119522|Q8TEH3-5|DENND1A;REV__nc|ENSG00000119522|Q8TEH3-6|DENND1A;REV__nc|ENSG00000119522|Q8TEH3-7|DENND1A;REV__nc|ENSG00000119522|Q8TEH3|DENND1A 3.2813086475875832 0.8596665074481906 6 NN{M(Oxidation (M))|F}QAQQNA{M(Oxidation (M))|F}Y 11 -1 65.831 0.0 0.0 4.2154 0.0 0.0 218.10548598457189 0.0 218.10548598457189 0.0 31.594097020937696 0.0 0.0 0 0.9124379954164592 0.0 0.0 1.9291746928241125 NN{M(Oxidation (M))|F}QAQQNA{M(Oxidation (M))|F}Y 4.2154 - 2988 1 1.658 59116.0 0.4600000083446502 1450 5133 6582 SUDHL4_400M_050219_2,6585 SUDHL4_400M_050219_2,6585,YVHQWYMPYLM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6587 33.349 41.0 1117100.0 25 0 107420.0 + 14863 ILHDDEVTV 9 73 520.766508779972 1039.518464626744 2 520.7667724490166 MULTI CID FTMS 0 0 0 6586 1302647.625 0.6394141642043012 3 -0.0195693969726562 1 Unmodified _ILHDDEVTV_ ENSG00000137818|ENST00000260379|RPLP1;ENST00000487304.6_1_15:69745218-69746066:+|nuORF;nc|ENSG00000137818|P05386-2|RPLP1 34.10243960390752 0.1078313939113124 6 [HD]DE{I|L}{I|L}VTV 9 4 + 37.514 0.0 0.0 3.6088 3.6088 71.772 0.0 0.0 0.0 0.2715634262635618 15.118252904652472 0.2715634262635618 1.249387366082999 0 0.8182503180159344 0.0 0.0 0.0 [HD]DE{I|L}{I|L}VTV;[HD]DEV{I|L}{I|L}TV;[HD]D{I|L}{I|L}EVTV;[HD]DE{I|L}V{I|L}TV;[HD]D{I|L}{I|L}D{I|L}TV;[HD]{I|L}{I|L}DEVTV;[HD]D{I|L}E{I|L}VTV;[HD]{I|L}D{I|L}EVTV;[HD]D{I|L}D{I|L}{I|L}TV;[HD]{I|L}{I|L}DD{I|L}TV 3.6088;3.4886;3.3954;3.3192;3.1058;2.9652;2.9364;2.872;2.8162;2.6756 -;-;-;-;-;-;-;-;-;- 312 1 1.658 44973.7 1.0 1451 5134 6586 SUDHL4_400M_050219_2,6587 SUDHL4_400M_050219_2,6587,ILHDDEVTV True True ILHDDEVTV 33.348584 520.766772449017 10205119.0 6586.0 ENST00000487304.6_1_15:69745218-69746066:+|nuORF;;nc|ENSG00000137818|P05386-2|RPLP1;;ENSG00000137818|ENST00000260379|RPLP1 8.849575996398926 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6588 33.355 346.0 128890.0 25 0 10234.0 + + 19885 FAHTNVESL 9 92 509.2514422475125 1016.488331561825 2 509.2527953982353 MULTI CID FTMS 0 0 0 6586 115360.15625 1.0 0 0.0 2 Unmodified _LHQFGSESI_ ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;ENSG00000167004|ENST00000300289|PDIA3 20.453626601364224 0.2830276176381075 6 C(Carbamidomethyl (C))KYS{I|L} 5 -1 26.128 0.0 0.0 2.5704 0.0 0.0 347.16620129014376 0.0 347.16620129014376 0.0 5.158715643802765 0.0 0.0 0 0.8182503180159344 0.0 0.3252574989159953 0.0 C(Carbamidomethyl (C))KYS{I|L} 2.5704 - 155 + 1 1.658 38901.4 1.0 1452 5134 6586 SUDHL4_400M_050219_2,6588 SUDHL4_400M_050219_2,6588,LHQFGSESI False False FAHTNVESL 33.35488 509.252795398235 679332.375 6586.0 ENST00000471856.1_1_1:146649692-146651075:+|nuORF;;ENST00000434494.5_1_15:44038867-44063413:+|nuORF;;ENSG00000167004|ENST00000300289|PDIA3 3.19316832224528 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6593 33.376 342.0 203740.0 25 0 23231.0 + 28392 PSPHELPLS 9 87 488.76013273798105 0 488.7603332400322 PEAK CID FTMS 0 0 0 6592 108468.125 0.8952912657075869 -2 0.0081329345703125 1 Unmodified _PSPHELPLS_ REV__ENSG00000185775|ENST00000332857|SPATA31A6;REV__ENSG00000204849|ENST00000377647|SPATA31A1;REV__ENSG00000275969|ENST00000428649|SPATA31A3;REV__ENSG00000276040|ENST00000619167|SPATA31A7;REV__ENSG00000276581|ENST00000437823|SPATA31A5 26.88365393820708 0.1386685954232994 6 {I|L}PS 3 -1 14.548 0.0 0.0 1.4913 0.0 0.0 547.2402228960809 128.0719393365844 675.3121622326653 0.0 0.0 0.0 0.0 0 0.5 0.0 0.6237125054200234 0.0 {I|L}PS 1.4913 - 242 + 1 1.658 60882.9 1.0 1453 5138 6592 SUDHL4_400M_050219_2,6593 SUDHL4_400M_050219_2,6593,PSPHELPLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6596 33.39 437.0 127420.0 25 0 12416.0 + 11446 GIAMDARQY 9 78 512.747522574126 1023.480492215052 2 512.7471191287041 MULTI CID FTMS 0 0 0 6595 54991.69921875 0.5651344741352539 -3 0.0168647766113281 1 Unmodified _GIAMDARQY_ REV__ENSG00000105464|ENST00000263269|GRIN2D 9.347437153973935 0.588369872918737 6 VY 2 -1 19.464 0.0 0.0 1.9017 0.0 0.0 743.3381715136834 0.0 743.3381715136834 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 VY 1.9017 - 67 + 1 1.658 47026.0 1.0 1454 5140 6595 SUDHL4_400M_050219_2,6596 SUDHL4_400M_050219_2,6596,GIAMDARQY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6597 33.404 800.0 55750.0 25 0 2546.6 + -1 FKFELGCKNVI 11 67 677.8639561631514 1353.7133593931028 2 677.8640624880791 MULTI CID FTMS 0 0 0 6595 80628.0078125 1.0 0 0.0 2 Carbamidomethyl (C) _FKFELGC(Carbamidomethyl (C))KNVI_ REV__ENSG00000232040|ENST00000452236|SCAND3 7.101721422024254 0.8416415510090076 6 PSQSANV{I|L} 8 -1 62.588 0.0 0.0 4.6234 0.0 0.0 539.2971962019813 0.0 539.2971962019813 0.0 46.389888100039016 0.0 0.0 0 0.4247425010840047 0.0 1.3494850021680094 0.0 PSQSANV{I|L} 4.6234 - 221 1 1.658 38412.7 0.449999988079071 1455 5140 6595 SUDHL4_400M_050219_2,6597 SUDHL4_400M_050219_2,6597,FKFELGCKNVI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6599 33.417 507.0 167390.0 25 0 13635.0 + -1 VDALSPLMFP 10 107 553.2833137783014 1104.5520746234026 2 553.2830688357353 MULTI CID FTMS 0 0 0 6598 164766.875 0.6333241023066816 3 -0.1035614013671875 1 Oxidation (M) _VDALSPLM(Oxidation (M))FP_ REV__ENSG00000130348|ENST00000369046|QRSL1;REV__nc|ENSG00000130348|Q9H0R6-2|QRSL1 20.453626601364224 0.5043500229302764 6 YV{M(Oxidation (M))|F}ATT{I|L}KY 9 -1 + 84.892 0.0 0.0 7.6857 7.6857 86.262 0.0 0.0 0.0 72.90275643486048 10.998709199930872 10.998709199930872 3.0102999566398125 0 0.805462187404089 2.0 0.3807196863200844 0.0 YV{M(Oxidation (M))|F}ATT{I|L}KY;VY{M(Oxidation (M))|F}ATT{I|L}KY;YYKQ{I|L}EVY;YY[PG]TT{I|L}KY;YV[VP]M{I|L}[PS]{[CP]|[EA]};YYK[AG]{I|L}EVY;VY[VP]M{I|L}[PS]{[CP]|[EA]} 7.6857;7.4132;3.7221;3.3761;3.0279;2.8835;2.7553 -;-;-;-;-;-;- 498 + 1 1.658 69204.8 1.0 1456 5141 6598 SUDHL4_400M_050219_2,6599 SUDHL4_400M_050219_2,6599,VDALSPLMFP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6600 33.422 278.0 314860.0 25 0 34771.0 + -1 VQIPPSTTY 9 115 503.30677395492967 502.2994974883297 1 503.3062011599541 MULTI CID FTMS 0 0 0 6598 124590.7734375 0.3295483344144959 13 -0.3281288146972656 2 ENSG00000129351|ENST00000588657|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-2|ILF3;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;nc|ENSG00000129351|Q12906|ILF3;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-3|ILF3;nc|ENSG00000129351|Q12906-6|ILF3 6 TY 2 -1 16.186 0.0 0.0 3.2223 0.0 0.0 220.1785085740703 0.0 220.1785085740703 0.0 6.826382099970079 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 TY 3.2223 - 16 + 1 1.658 71189.8 1.0 1457 5141 6598 SUDHL4_400M_050219_2,6600 SUDHL4_400M_050219_2,6600, False False VQIPPSTTY 33.421969 503.306201159954 1118189.75 6598.0 ENSG00000129351|ENST00000588657|ILF3;;nc|ENSG00000129351|Q12906-4|ILF3;;nc|ENSG00000129351|Q12906-2|ILF3;;ENST00000587928.5_1_19:10781281-10792148:+|nuORF;;nc|ENSG00000129351|Q12906|ILF3;;nc|ENSG00000129351|Q12906-5|ILF3;;nc|ENSG00000129351|Q12906-3|ILF3;;nc|ENSG00000129351|Q12906-6|ILF3 3.8620936075846353 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6601 33.428 307.0 220670.0 25 0 69837.0 -1 0 78 472.2729539867175 471.2656775201175 1 472.2731811404228 MULTI CID FTMS 0 0 0 6598 100607.8828125 0.7732253395670222 -2 0.0282135009765625 3 6 TP 2 -1 18.583 0.0 0.0 3.9433 0.0 0.0 0.0 270.1407869928344 270.1407869928344 7.163510574656247 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TP 3.9433 - 22 + 1 1.658 57608.4 1.0 1458 5141 6598 SUDHL4_400M_050219_2,6601 SUDHL4_400M_050219_2,6601, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6603 33.436 304.0 168870.0 25 0 8980.4 2383 AQMPTVHY 8 94 481.723493177423 961.432433421646 2 481.7238036990166 MULTI CID FTMS 0 0 0 6602 126713.578125 0.4805359587113289 4 -0.1898384094238281 1 Oxidation (M) _AQM(Oxidation (M))PTVHY_ ENSG00000077080|ENST00000160382|ACTL6B;ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A 49.66892048692302 0.1408045912742846 6 [QA]{M(Oxidation (M))|F}[TP]VHY 8 0 + 33.689 0.0 0.0 3.5041 3.5041 84.678 0.0 0.0 0.0 17.402953031565854 7.74735947860492 7.74735947860492 32.42320262106496 0 0.9247425010840048 0.0 0.3807196863200844 0.0 + + [QA]{M(Oxidation (M))|F}[TP]VHY;[QA]{[{M(Oxidation (M))|F}D]|MM}[YR]Y 3.5041;0.13171 +;- + 92 + 1 1.658 43899.9 1.0 1459 5142 6602 SUDHL4_400M_050219_2,6603 SUDHL4_400M_050219_2,6603,AQMPTVHY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6604 33.441 292.0 259550.0 25 0 18638.0 + -1 AMAPTSPQI 9 102 466.2309496503328 930.4473463674656 2 466.2312805056572 MULTI CID FTMS 0 0 0 6602 231353.328125 1.0 0 0.0 2 Oxidation (M) _AM(Oxidation (M))APTSPQI_ ENSG00000143436|ENST00000368830|MRPL9 24.67388899826682 0.2172451872415813 6 {I|L} 1 -1 14.604 0.0 0.0 1.5696 0.0 0.0 799.3524652412922 0.0 799.3524652412922 0.0 3.634993639681312 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5696 + + 133 + 1 1.658 64460.8 1.0 1460 5142 6602 SUDHL4_400M_050219_2,6604 SUDHL4_400M_050219_2,6604,AMAPTSPQI False False AMAPTSPQI 33.441004 466.231280505657 1379183.625 6602.0 ENSG00000143436|ENST00000368830|MRPL9 4.129609902699788 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6605 33.444 168.0 371870.0 25 0 44741.0 + 45390 YTAPPGPRL 9 79 486.26998094443263 970.5254089556652 2 486.2690612673759 MULTI CID FTMS 0 0 0 6602 129927.875 0.7557887197721196 5 -0.2238426208496093 3 Unmodified _YTAPPGPRL_ ENSG00000140398|ENST00000355059|NEIL1;ENST00000561643.5_1_15:75639698-75645080:+|nuORF;ENST00000564738.5_1_15:75641306-75646619:+|nuORF;ENST00000564951.1_1_15:75639698-75641681:+|nuORF 14.838274106304384 0.4350285940865338 6 [YT]APP 5 4 37.461 0.0 0.0 3.8598 0.0 0.0 0.0 438.2442721002563 438.2442721002563 26.99227560957083 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + [YT]APP 3.8598 + + 44 + 1 1.658 50795.4 1.0 1461 5142 6602 SUDHL4_400M_050219_2,6605 SUDHL4_400M_050219_2,6605,YTAPPGPRL False True YTAPPGPRL 33.444285 486.269061267376 1455665.125 6602.0 ENST00000564951.1_1_15:75639698-75641681:+|nuORF;;ENST00000561643.5_1_15:75639698-75645080:+|nuORF;;ENSG00000140398|ENST00000355059|NEIL1;;ENST00000564738.5_1_15:75641306-75646619:+|nuORF 1.33327051003774 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6606 33.45 304.0 172990.0 25 0 26971.0 + 10308 FSDENVRAI 9 81 525.7647545924375 1049.514956251675 2 525.7643310427666 MULTI CID FTMS 0 0 0 6602 104211.71875 0.9425465014503406 -2 0.0476837158203125 4 Unmodified _FSDENVRAI_ ENSG00000105851|ENST00000496166|PIK3CG 38.17557092003332 0.0854718145212029 6 {M(Oxidation (M))|F}SDENV{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 9 0 + 54.299 0.0 0.0 5.1738 5.1738 77.258 0.0 0.0 0.0 43.46201805504006 1.163385648463816 1.163385648463816 1.6749108729376303 0 0.7742275032520141 0.0 0.4247425010840047 0.0 + + {M(Oxidation (M))|F}SDENV{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{M(Oxidation (M))|F}SDENV[R{I|L}]A;{M(Oxidation (M))|F}SDEGGV{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{M(Oxidation (M))|F}SDEGGV[R{I|L}]A;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HK][RH]SE 5.1738;5.0142;4.2964;4.1368;1.4678 +;-;-;-;- + 105 + 1 1.658 51195.7 1.0 1462 5142 6602 SUDHL4_400M_050219_2,6606 SUDHL4_400M_050219_2,6606,FSDENVRAI True True FSDENVRAI 33.449852 525.764331042767 627440.0625 6602.0 ENSG00000105851|ENST00000496166|PIK3CG 5.591519355773926 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6608 33.466 800.0 167700.0 25 0 15853.0 + 45161 YQFTGIKKY 9 117 574.3105366879895 1146.606520442779 2 574.3109008669853 MULTI CID FTMS 0 0 0 6607 121839.0 0.666156023957948 -1 0.0223007202148437 1 Unmodified _YQFTGIKKY_ ENSG00000173915|ENST00000369815|ATP5MK 65.47368725323818 0.0230515101691092 6 YQ{M(Oxidation (M))|F}T{[VA]|[{I|L}G]}KKY 9 0 + 64.131 0.0 0.0 5.5931 5.5931 90.364 0.0 0.0 0.0 43.72515503637926 11.373949984654246 11.373949984654246 19.665762445130497 0 0.7887254899964358 1.0457574905606752 0.4247425010840047 0.6747425010840047 + + YQ{M(Oxidation (M))|F}T{[VA]|[{I|L}G]}KKY;Y[AG]{M(Oxidation (M))|F}T{[VA]|[{I|L}G]}KKY;{I|L}{I|L}[NP]{[VA]|[{I|L}G]}T{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 5.5931;3.878;1.1156 +;-;- + 191 + 1 1.658 102580.7 0.5099999904632568 1463 5143 6607 SUDHL4_400M_050219_2,6608 SUDHL4_400M_050219_2,6608,YQFTGIKKY True True YQFTGIKKY 33.466242 574.310900866985 902204.5625 6607.0 ENSG00000173915|ENST00000369815|ATP5MK 5.4596865971883135 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6609 33.475 513.0 169790.0 25 0 11182.0 + 10352 FSHQGVQL 8 108 458.2378298808015 0 458.2375060915947 PEAK CID FTMS 0 0 0 6607 120761.7578125 0.9461590819918578 -1 0.0223007202148437 2 Unmodified _FSHQGVQL_ ENSG00000106263|ENST00000360876|EIF3B;ENST00000463026.5_1_7:2404000-2406084:+|nuORF;nc|ENSG00000106263|P55884-2|EIF3B 32.30548876998284 0.2094692153732555 6 VGQW 4 6 17.656 0.0 0.0 1.9308 0.0 0.0 259.1537125477443 182.0568483942016 441.2105609419459 0.0 0.0 0.0 0.0 0 0.25 0.0 0.0 0.6139829889124311 VGQW 1.9308 - 74 + 1 1.658 70207.9 1.0 1464 5143 6607 SUDHL4_400M_050219_2,6609 SUDHL4_400M_050219_2,6609,FSHQGVQL False True FSHQGVQL 33.475267 458.237506091595 747273.25 6607.0 nc|ENSG00000106263|P55884-2|EIF3B;;ENST00000463026.5_1_7:2404000-2406084:+|nuORF;;ENSG00000106263|ENST00000360876|EIF3B 4.292972882588704 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6610 33.489 800.0 136510.0 25 0 9147.0 + + 27558 SAQGKPLAL 9 152 442.7637847545906 883.5130165759813 2 442.7634155154228 MULTI CID FTMS 0 0 0 6607 104878.0625 0.9183379007178752 -1 0.0223007202148437 3 Unmodified _PLAKNQTL_ ENSG00000100401|ENST00000356244|RANGAP1 28.17323086031832 0.4514957916281387 6 [{I|L}P]AKNA{I|L}{[SA]|[TG]} 9 -1 + 33.355 0.0 0.0 3.7752 3.7752 74.103 0.0 0.0 0.0 13.970223981117954 19.37517294428551 13.970223981117954 2.4987747321660017 0 0.0 0.9208187539523752 0.0 1.0 [{I|L}P]AKNA{I|L}{[SA]|[TG]};[{I|L}P]AKGGA{I|L}{[SA]|[TG]};[{I|L}P]AKGQ{I|L}{[SA]|[TG]};[{I|L}P][KQ]GA{I|L}{[SA]|[TG]};[{I|L}P][KQ]Q{I|L}{[SA]|[TG]};[KG]Q[{I|L}P]A{I|L}{[SA]|[TG]} 3.7752;3.4924;2.7272;2.4909;1.7318;0.92251 -;-;-;-;-;- 138 1 1.658 88177.5 0.4600000083446502 1465 5143 6607 SUDHL4_400M_050219_2,6610 SUDHL4_400M_050219_2,6610,PLAKNQTL False False SAQGKPLAL 33.489083 442.763415515423 672915.3125 6607.0 ENSG00000100401|ENST00000356244|RANGAP1 3.989577372868856 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6611 33.494 250.0 260640.0 25 0 44309.0 -1 0 78 517.2855959050784 516.2783194384783 1 517.2856323122978 MULTI CID FTMS 0 0 0 6607 326128.84375 0.1308805771198566 18 -0.3772468566894531 4 6 SV 2 -1 11.792 0.0 0.0 2.2841 0.0 0.0 312.16749287773456 0.0 312.16749287773456 0.0 3.116387447746229 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 SV 2.2841 - 12 + 1 1.658 53165.9 1.0 1466 5143 6607 SUDHL4_400M_050219_2,6611 SUDHL4_400M_050219_2,6611, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6612 33.508 800.0 93519.0 25 0 10195.0 -1 0 79 954.4299515968038 1906.845350260408 2 954.4326049685478 MULTI CID FTMS 0 0 0 6607 99053.8046875 0.755436072045375 -3 0.0699844360351562 5 6 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 69.625 0.0 0.0 3.6513 3.6513 79.324 0.0 0.0 0.0 3.4336777395950406 51.62330770306362 3.4336777395950406 9.013902021140495 0 0.9247425010840048 0.0 0.3252574989159953 0.805462187404089 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN[NP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEND[HT][{I|L}T] 3.6513;3.1786;3.1786;3.1786;3.1786;2.9773;2.6686;2.6449;2.5279;1.8552 -;-;-;-;-;-;-;-;-;- 462 1 1.658 56506.6 0.4199999868869781 1467 5143 6607 SUDHL4_400M_050219_2,6612 SUDHL4_400M_050219_2,6612, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6614 33.515 199.0 358960.0 25 0 45880.0 + 15964 ITAPPSRVL 9 77 477.2926588682337 952.5707648032676 2 477.2925292849541 MULTI CID FTMS 0 0 0 6613 319624.9375 0.1673861150670117 41 -0.9773216247558594 1 Unmodified _ITAPPSRVL_ ENSG00000099194|ENST00000370355|SCD 36.506200033944 0.094635877243972 6 {I|L}TAPP 5 4 58.232 0.0 0.0 6.1131 0.0 0.0 0.0 470.2734469049438 470.2734469049438 39.53524722859527 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + {I|L}TAPP 6.1131 + + 71 + 1 1.658 59201.8 1.0 1468 5144 6613 SUDHL4_400M_050219_2,6614 SUDHL4_400M_050219_2,6614,ITAPPSRVL True True ITAPPSRVL 33.51526 477.292529284954 90134870.0 6613.0 ENSG00000099194|ENST00000370355|SCD 5.567946434020996 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6615 33.523 443.0 178180.0 25 0 16750.0 + 14822 ILFGHENRV 9 123 362.2012835652839 1083.5820212960518 3 362.2010681033134 MULTI CID FTMS 0 0 0 6613 89008.0 0.1309604765723661 11 -0.2372283935546875 2 Unmodified _ILFGHENRV_ ENSG00000069966|ENST00000261837|GNB5;nc|ENSG00000069966|O14775-2|GNB5;nc|ENSG00000069966|O14775-3|GNB5 11.517880264261096 0.5249077435482886 6 {I|L}{I|L}{M(Oxidation (M))|F}GHE 6 3 40.406 0.0 0.0 3.7289 0.0 0.0 0.0 384.1993807428344 384.1993807428344 31.37169811418 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + {I|L}{I|L}{M(Oxidation (M))|F}GHE 3.7289 + + 82 + 1 1.658 67893.4 1.0 1469 5144 6613 SUDHL4_400M_050219_2,6615 SUDHL4_400M_050219_2,6615,ILFGHENRV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6616 33.528 291.0 221550.0 25 0 26684.0 + 9673 FLQEHNTTL 9 106 551.7800049665187 1101.5454569998374 2 551.7798339724541 MULTI CID FTMS 0 0 0 6613 209100.546875 0.47008634526105 -1 0.0577278137207031 3 Unmodified _FLQEHNTTL_ ENSG00000015133|ENST00000389857|CCDC88C 66.45667989310934 0.0225072657982126 6 {[YC]|[HE]}QNTT{I|L}{M(Oxidation (M))|F}{I|L} 9 6 + 38.253 0.0 0.0 3.4727 3.4727 73.988 0.0 0.0 0.0 5.954839578393354 11.949485500851676 5.954839578393354 3.0102999566398125 0 0.242992819099939 0.0 1.360924374808178 0.6861818737241735 {[YC]|[HE]}QNTT{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}NQTT{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}QNT{I|L}{M(Oxidation (M))|F}T{I|L};{[YC]|[HE]}QNT{I|L}T{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}QGGTT{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}[AG]NTT{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}NQT{I|L}{M(Oxidation (M))|F}T{I|L};{[YC]|[HE]}NQT{I|L}T{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}N[AG]TT{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}GGQTT{I|L}{M(Oxidation (M))|F}{I|L} 3.4727;3.1994;2.8565;2.753;2.6367;2.6367;2.5833;2.4798;2.3635;2.3635 -;-;-;-;-;-;-;-;-;- 544 1 1.658 53991.1 1.0 1470 5144 6613 SUDHL4_400M_050219_2,6616 SUDHL4_400M_050219_2,6616,FLQEHNTTL True True FLQEHNTTL 33.528476 551.779833972454 2468348.75 6613.0 ENSG00000015133|ENST00000389857|CCDC88C 6.51333491007487 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6617 33.533 228.0 457500.0 25 0 69759.0 + 25678 NGKTSKPA 8 76 401.7231956913327 801.4318384494654 2 401.7230712771416 MULTI CID FTMS 0 0 0 6613 207271.96875 0.1665008779530314 -5 0.13177490234375 4 Unmodified _NGKTSKPA_ REV__ENSG00000163629|ENST00000411767|PTPN13;REV__nc|ENSG00000163629|Q12923-2|PTPN13;REV__nc|ENSG00000163629|Q12923-3|PTPN13;REV__nc|ENSG00000163629|Q12923-4|PTPN13 2.059750862983233 0.8118298629782807 6 T 1 -1 5.4846 0.0 0.0 0.68434 0.0 0.0 401.22369133208105 296.1325777643188 697.3562690963998 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.68434 + + 5 + 1 1.658 87434.5 1.0 1471 5144 6613 SUDHL4_400M_050219_2,6617 SUDHL4_400M_050219_2,6617,NGKTSKPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6618 33.542 540.0 182530.0 25 0 24177.0 + 37426 TLDDKKVYL 9 132 547.8084010902487 1093.602249247297 2 547.8076660037041 MULTI CID FTMS 0 0 0 6613 114382.9765625 0.8057898457306243 -1 0.0577278137207031 5 Unmodified _TLDDKKVYL_ ENSG00000125633|ENST00000376300|CCDC93;ENST00000466171.1_1_2:118694276-118701638:-|nuORF 61.60191391372663 0.0251951588191061 6 T{I|L}DDK 5 4 63.998 0.0 0.0 5.852 0.0 0.0 0.0 518.2994956064207 518.2994956064207 31.764683573967567 0.0 0.0 0.0 0 1.174742501084005 2.0 0.3807196863200844 0.0 + T{I|L}DDK 5.852 + + 1263 + 1 1.658 75861.6 1.0 1472 5144 6613 SUDHL4_400M_050219_2,6618 SUDHL4_400M_050219_2,6618,TLDDKKVYL True True TLDDKKVYL 33.542252 547.807666003704 747455.5625 6613.0 ENST00000466171.1_1_2:118694276-118701638:-|nuORF;;ENSG00000125633|ENST00000376300|CCDC93 6.090775807698567 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6619 33.556 800.0 110100.0 25 0 5915.3 + 29537 QLNEKVAQL 9 133 521.7981585332745 1041.581764133349 2 521.7985717654228 MULTI CID FTMS 0 0 0 6613 97121.53125 0.8944807444486896 1 -0.0812492370605468 6 Unmodified _QLNEKVAQL_ ENSG00000001630|ENST00000003100|CYP51A1;ENST00000419457.1_1_13:29296686-29297403:-|nuORF;nc|ENSG00000001630|Q16850-2|CYP51A1 41.8396318013385 0.0653578398400075 6 [Q{I|L}]N 3 6 27.76 0.0 0.0 2.6651 0.0 0.0 0.0 683.3718966119749 683.3718966119749 12.609309280316904 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + [Q{I|L}]N 2.6651 + + 404 + 1 1.658 69720.5 0.4900000095367431 1473 5144 6613 SUDHL4_400M_050219_2,6619 SUDHL4_400M_050219_2,6619,QLNEKVAQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6620 33.57 800.0 141380.0 25 0 20453.0 3557 CYGRYWSYGFY 11 116 732.8046343476676 1463.5947157621351 2 732.8059570193291 MULTI CID FTMS 0 0 0 6613 82863.2421875 0.4623953174261538 -2 0.0800285339355468 7 Unmodified _CYGRYWSYGFY_ ENSG00000244624|ENST00000334664|KRTAP20-1 17.11289562659939 0.6791789249425932 6 DEAQQDA{M(Oxidation (M))|F}Y 9 9 85.838 0.0 0.0 5.8649 0.0 0.0 378.16424536304 0.0 378.16424536304 0.0 58.394440268278736 0.0 0.0 0 1.242992819099939 0.0 1.392159058960253 1.1861818737241734 DEAQQDA{M(Oxidation (M))|F}Y 5.8649 - 2977 1 1.658 81062.4 0.4399999976158142 1474 5144 6613 SUDHL4_400M_050219_2,6620 SUDHL4_400M_050219_2,6620,CYGRYWSYGFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6621 33.575 275.0 253960.0 25 0 23602.0 27809 PLPSCGVWIL 10 92 542.7988888193026 1083.5832247054052 2 543.3013183474541 MULTI CID FTMS 0 0 0 6613 264892.5625 0.8600540511582565 9 -0.2205085754394531 8 Unmodified _PLPSCGVWIL_ ENST00000224950.7_1_10:105677279-105677345:-|nuORF 3.876331618118854 0.7087061897849828 6 QS{M(Oxidation (M))|F} 3 9 18.94 0.0 0.0 1.7479 0.0 0.0 179.14085517591144 539.2432955377561 718.3841507136676 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 QS{M(Oxidation (M))|F} 1.7479 - 46 + 1 1.658 61658.7 1.0 1475 5144 6613 SUDHL4_400M_050219_2,6621 SUDHL4_400M_050219_2,6621,PLPSCGVWIL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6622 33.589 800.0 198770.0 25 0 22903.0 -1 0 75 996.3026161098056 4976.476698216027 5 996.9044067263604 MULTI CID FTMS 0 0 0 6613 107220.546875 0.2477987555380938 -13 0.2117958068847656 9 6 {I|L} 1 -1 11.99 0.0 0.0 0.24093 0.0 0.0 1869.9274018528747 2990.483362448626 4860.4107643015 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L} 0.24093 - 10 + 1 1.658 106130.3 0.4199999868869781 1476 5144 6613 SUDHL4_400M_050219_2,6622 SUDHL4_400M_050219_2,6622, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6624 33.597 208.0 320490.0 25 0 57388.0 + 14798 ILDQKINEV 9 108 536.30576863163 1070.59698433006 2 536.3057128787041 MULTI CID FTMS 0 0 0 6623 274137.5625 0.0269828376346902 19 -0.2824172973632812 1 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 57.72198328787511 0.0273433238377839 6 {I|L}{I|L}DQ 4 5 60.795 0.0 0.0 5.6786 0.0 0.0 0.0 598.3219698541624 598.3219698541624 30.62612305009728 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.0 0.7742275032520141 + {I|L}{I|L}DQ 5.6786 + + 876 + 1 1.658 54104.8 1.0 1477 5145 6623 SUDHL4_400M_050219_2,6624 SUDHL4_400M_050219_2,6624,ILDQKINEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6625 33.603 325.0 162060.0 25 0 12841.0 + 11719 GLHSVDVTY 9 89 495.7482417930947 989.4819306529894 2 495.7486450076103 MULTI CID FTMS 0 0 0 6623 121519.75 1.0 0 0.0 2 Unmodified _GLHSVDVTY_ ENSG00000196924|ENST00000369850|FLNA;nc|ENSG00000196924|P21333-2|FLNA 42.09456458481378 0.0639583784996157 6 SVDVTY 6 3 36.542 0.0 0.0 3.693 0.0 0.0 307.16438491035314 0.0 307.16438491035314 0.0 19.55192012318623 0.0 0.0 0 0.8935078169319297 0.0 1.110924374808178 0.0 + SVDVTY 3.693 + + 285 1 1.658 46170.2 1.0 1478 5145 6623 SUDHL4_400M_050219_2,6625 SUDHL4_400M_050219_2,6625,GLHSVDVTY True True GLHSVDVTY 33.602586 495.74864500761 682982.1875 6623.0 ENSG00000196924|ENST00000369850|FLNA;;nc|ENSG00000196924|P21333-2|FLNA 7.561563809712728 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6626 33.606 185.0 400760.0 25 0 56723.0 + -1 GELTGEVRM 9 96 504.24407015456586 1006.4735873759316 2 504.2446166872978 MULTI CID FTMS 0 0 0 6623 274037.28125 0.5301235519176853 -6 0.2130241394042968 3 Oxidation (M) _GELTGEVRM(Oxidation (M))_ ENSG00000128591|ENST00000325888|FLNC;nc|ENSG00000128591|Q14315-2|FLNC 49.55428908609986 0.0413471690215031 6 {[DA]|[EG]}{I|L}TGEVR{M(Oxidation (M))|F} 9 -1 + 67.73 0.0 0.0 6.7294 6.7294 92.978 0.0 0.0 0.0 27.518119729938 7.949171771974761 7.949171771974761 16.03031650958563 0 1.424742501084005 1.6989700043360187 0.3807196863200844 0.3054621874040891 {[DA]|[EG]}{I|L}TGEVR{M(Oxidation (M))|F};{[DA]|[EG]}{I|L}TG{[YD]|[{M(Oxidation (M))|F}M]}G[VP];W{I|L}TGS[{M(Oxidation (M))|F}T][VP];{[DA]|[EG]}{I|L}[MN][{M(Oxidation (M))|F}T][VP];[{I|L}T]G[RD]T{I|L}[EC];{[{M(Oxidation (M))|F}C]|[YS]}{I|L}TAAEG[VP];{[SA]|[TG]}{I|L}[RD]T{I|L}[EC];[{I|L}T]G[{I|L}T][RD][EC];[{I|L}A]S[RD]T{I|L}[EC] 6.7294;5.1367;3.9682;2.8009;2.6694;1.997;1.413;1.0092;0.83625 +;-;-;-;-;-;-;-;- + 295 + 1 1.658 61685.3 1.0 1479 5145 6623 SUDHL4_400M_050219_2,6626 SUDHL4_400M_050219_2,6626,GELTGEVRM False False GELTGEVRM 33.606149 504.244616687298 5108091.0 6623.0 ENSG00000128591|ENST00000325888|FLNC;;nc|ENSG00000128591|Q14315-2|FLNC 5.437165816624959 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6627 33.612 312.0 236800.0 25 0 30152.0 + 11664 GLDPARVNV 9 93 470.7644661479432 939.5143793626864 2 470.7638732790947 MULTI CID FTMS 0 0 0 6623 177770.8125 0.4126968350845262 -9 0.2298927307128906 4 Unmodified _GLDPARVNV_ ENSG00000146701|ENST00000315758|MDH2;ENST00000424167.2_1_7:75689738-75694307:+|nuORF;nc|ENSG00000146701|P40926-2|MDH2 24.020572477871973 0.2255576514309169 6 {[VA]|[{I|L}G]}DPA 5 4 47.575 0.0 0.0 5.0638 0.0 0.0 0.0 483.2672213190063 483.2672213190063 32.51348757971677 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[VA]|[{I|L}G]}DPA 5.0638 + + 401 + 1 1.658 63321.7 1.0 1480 5145 6623 SUDHL4_400M_050219_2,6627 SUDHL4_400M_050219_2,6627,GLDPARVNV False True GLDPARVNV 33.611836 470.763873279095 4987663.0 6623.0 nc|ENSG00000146701|P40926-2|MDH2;;ENSG00000146701|ENST00000315758|MDH2;;ENST00000424167.2_1_7:75689738-75694307:+|nuORF 5.476166725158691 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6628 33.617 306.0 270910.0 25 0 51424.0 30389 RAPAGPKP 8 96 397.2374313642137 792.4603097952273 2 397.2372314333916 MULTI CID FTMS 0 0 0 6623 161158.203125 0.3967561099661972 -9 0.2298927307128906 5 Unmodified _RAPAGPKP_ ENST00000395738.2_1_22:50921135-50921831:+|nuORF 5.230669730166228 0.792582437072536 6 {I|L}{I|L}HR 4 8 42.44 0.0 0.0 5.3555 0.0 0.0 255.1217416407025 0.0 255.1217416407025 0.0 22.07854797738412 0.0 0.0 0 0.7614393726401688 0.0 0.0 0.2887254899964357 {I|L}{I|L}HR 5.3555 - 58 + 1 1.658 70536.0 1.0 1481 5145 6623 SUDHL4_400M_050219_2,6628 SUDHL4_400M_050219_2,6628,RAPAGPKP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6630 33.629 527.0 148400.0 25 0 7570.8 + + 42251 RLAAAAAAAQSVY 13 92 631.3494569154475 1260.684360897695 2 631.8458740115166 MULTI CID FTMS 0 0 0 6629 95774.7109375 0.98680481052698 1 -0.0340042114257812 1 Unmodified _VSMVSKLNREV_ nc|ENSG00000233276|P07203-2|GPX1;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;ENSG00000233276|ENST00000419783|GPX1 5.296884461304476 0.8501568894076437 6 SQAAA 5 -1 29.949 0.0 0.0 2.3756 0.0 0.0 279.1480394385732 550.3093966119749 829.457436050548 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 SQAAA 2.3756 - 92 + 1 1.658 64028.9 1.0 1482 5146 6629 SUDHL4_400M_050219_2,6630 SUDHL4_400M_050219_2,6630,VSMVSKLNREV False False RLAAAAAAAQSVY 33.629232 631.845874011517 709320.4375 6629.0 nc|ENSG00000233276|P07203-2|GPX1;;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;;ENSG00000233276|ENST00000419783|GPX1 6.654799620310466 2.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6631 33.633 172.0 340690.0 25 0 24171.0 + 30795 RIFGTDSQY 9 90 543.7645792100119 1085.5146054868237 2 543.7643920779228 MULTI CID FTMS 0 0 0 6629 232665.28125 0.3382188040356818 -8 0.2503204345703125 2 Unmodified _RIFGTDSQY_ ENSG00000052802|ENST00000261507|MSMO1;nc|ENSG00000052802|Q15800-2|MSMO1 38.17557092003332 0.0854718145212029 6 [R{I|L}]{M(Oxidation (M))|F}GTDSQY 9 0 + 78.906 0.0 0.0 7.269 7.269 91.556 0.0 0.0 0.0 17.191512336730028 61.58616365146053 17.191512336730028 9.208187539523747 0 0.5 1.154901959985743 0.7742275032520141 0.0 + + [R{I|L}]{M(Oxidation (M))|F}GTDSQY;[R{I|L}]{M(Oxidation (M))|F}GTDS[AG]Y;[R{I|L}]{M(Oxidation (M))|F}GT[NS]EY;[R{I|L}][QT]{[YD]|[{M(Oxidation (M))|F}M]}QY;[R{I|L}]QQ{[{M(Oxidation (M))|F}C]|[YS]}EY;[R{I|L}][QT][YN]EY 7.269;6.4207;5.2643;2.4908;2.0165;1.9362 +;-;-;-;-;- + 153 1 1.658 49827.5 1.0 1483 5146 6629 SUDHL4_400M_050219_2,6631 SUDHL4_400M_050219_2,6631,RIFGTDSQY True True RIFGTDSQY 33.63259 543.764392077923 7163625.0 6629.0 ENSG00000052802|ENST00000261507|MSMO1;;nc|ENSG00000052802|Q15800-2|MSMO1 7.965305328369141 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6632 33.642 550.0 136630.0 25 0 11515.0 -1 VAVDSTGTYM 10 96 530.2376279689454 1058.460703004691 2 530.2369872927666 MULTI CID FTMS 0 0 0 6629 107638.5 1.0 0 0.0 3 Oxidation (M) _VAVDSTGTYM(Oxidation (M))_ ENSG00000227057|ENST00000374617|WDR46;ENST00000489905.1_1_6:33248421-33255161:-|nuORF 11.640296217721598 0.652229146672156 6 Y{M(Oxidation (M))|F} 2 -1 20.969 0.0 0.0 1.9811 0.0 0.0 730.3519516392595 0.0 730.3519516392595 0.0 0.9589312379110028 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F} 1.9811 + + 155 + 1 1.658 65722.9 1.0 1484 5146 6629 SUDHL4_400M_050219_2,6632 SUDHL4_400M_050219_2,6632,VAVDSTGTYM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6633 33.651 520.0 105190.0 25 0 5548.2 + 17309 KLSEPSSLQY 10 94 576.3006410374355 1150.586729141671 2 576.3004638552666 MULTI CID FTMS 0 0 0 6629 95135.78125 0.8577023450880271 1 -0.0340042114257812 4 Unmodified _KLSEPSSLQY_ ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-2|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR 34.93206674587334 0.2110832994570416 6 {I|L}QY 3 7 34.253 0.0 0.0 2.977 0.0 0.0 728.3702854566234 0.0 728.3702854566234 0.0 24.648415687162952 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 + {I|L}QY 2.977 + + 169 1 1.658 44470.6 1.0 1485 5146 6629 SUDHL4_400M_050219_2,6633 SUDHL4_400M_050219_2,6633,KLSEPSSLQY False True KLSEPSSLQY 33.651416 576.300463855267 687319.625 6629.0 nc|ENSG00000113161|P04035-3|HMGCR;;ENSG00000113161|ENST00000287936|HMGCR;;nc|ENSG00000113161|P04035-2|HMGCR 5.9923601150512695 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6636 33.673 800.0 71101.0 25 0 5069.5 -1 0 73 918.41898582269 1834.82341871218 2 918.4243041872978 MULTI CID FTMS 0 0 0 6635 80847.15625 0.1331475179404475 -25 0.4726142883300781 1 6 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 56.085 0.0 0.0 3.0567 3.0567 80.872 0.0 0.0 0.0 4.648867983026506 42.8976719887757 4.648867983026506 11.064921830680705 0 0.5 0.0 0.3807196863200844 0.4247425010840047 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QWN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QD[Y{I|L}]QS{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 3.0567;2.4537;2.088;1.828 -;-;-;- 723 1 1.658 42840.8 0.3899999856948852 1486 5148 6635 SUDHL4_400M_050219_2,6636 SUDHL4_400M_050219_2,6636, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6637 33.683 589.0 128090.0 25 0 10571.0 + 41959 VQKAIPMY 8 108 483.2607336850399 964.5069144368798 2 483.2608215212822 MULTI CID FTMS 0 0 0 6635 89747.0078125 0.8709874990778431 -3 0.0666236877441406 2 Oxidation (M) _VQKAIPM(Oxidation (M))Y_ nc|ENSG00000131100|P36543-3|ATP6V1E1;ENST00000439215.1_1_1:43369124-43369580:+|nuORF;ENSG00000131100|ENST00000253413|ATP6V1E1;ENST00000481365.5_1_22:18080958-18102283:-|nuORF;nc|ENSG00000131100|P36543-2|ATP6V1E1 49.66892048692302 0.1408045912742846 6 {[QV]|[N{I|L}]|[RA]|[KV]}KA{I|L}P{M(Oxidation (M))|F}Y 8 0 {[QV]|[N{I|L}]|[RA]|[KV]}KA + + 26.899 16.27 3.8168 2.7889 2.7889 51.343 0.0 0.0 0.0 0.0 7.161258704181993 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}KA{I|L}P{M(Oxidation (M))|F}Y 2.7889 + + 208 + 1 1.658 64204.6 1.0 1487 5148 6635 SUDHL4_400M_050219_2,6637 SUDHL4_400M_050219_2,6637,VQKAIPMY False False VQKAIPMY 33.683499 483.260821521282 496211.09375 6635.0 nc|ENSG00000131100|P36543-3|ATP6V1E1;;ENST00000439215.1_1_1:43369124-43369580:+|nuORF;;ENSG00000131100|ENST00000253413|ATP6V1E1;;ENST00000481365.5_1_22:18080958-18102283:-|nuORF;;nc|ENSG00000131100|P36543-2|ATP6V1E1 5.69589885075887 2.0 True 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6640 33.704 800.0 180610.0 25 0 23097.0 -1 0 111 406.7894051349628 811.5642573367256 2 406.7894775271416 MULTI CID FTMS 0 0 0 6639 193088.671875 0.362843512441062 -11 0.3117446899414062 1 6 {I|L}G{I|L}KR{I|L}{I|L} 7 -1 + 46.249 0.0 0.0 5.6987 5.6987 91.99 0.0 0.0 0.0 35.13937457471588 5.26995647758762 5.26995647758762 46.24861832279766 0 0.7742275032520141 0.0 0.0 0.3494850021680094 {I|L}G{I|L}KR{I|L}{I|L} 5.6987 - 34 + 1 1.658 115648.1 0.959999978542328 1488 5150 6639 SUDHL4_400M_050219_2,6640 SUDHL4_400M_050219_2,6640, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6643 33.714 203.0 295040.0 25 0 26717.0 + 30973 RLASLQSEV 9 84 501.7822776313919 1001.5500023295838 2 501.7813293337822 MULTI CID FTMS 0 0 0 6642 246008.859375 0.0676842115272791 -12 0.3279647827148437 1 Unmodified _RLASLQSEV_ ENST00000397281.6_1_7:150065961-150066789:+|nuORF;ENST00000487455.1_1_7:150065323-150066789:+|nuORF 36.506200033944 0.094635877243972 6 S{I|L}QSEV 6 3 51.191 0.0 0.0 5.1111 0.0 0.0 340.2214527814469 0.0 340.2214527814469 0.0 36.726759565325295 0.0 0.0 0 0.7742275032520141 0.0 0.8807196863200843 0.0 + S{I|L}QSEV 5.1111 + + 148 1 1.658 51310.4 1.0 1489 5152 6642 SUDHL4_400M_050219_2,6643 SUDHL4_400M_050219_2,6643,RLASLQSEV True True RLASLQSEV 33.714265 501.781329333782 31595004.0 6642.0 ENST00000487455.1_1_7:150065323-150066789:+|nuORF;;ENST00000397281.6_1_7:150065961-150066789:+|nuORF 4.810497760772705 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6644 33.728 800.0 112740.0 25 0 10353.0 + -1 NETKKERCEFY 11 89 752.3457226774741 1502.676892421748 2 752.3458129763603 MULTI CID FTMS 0 0 0 6642 82126.1953125 0.6417852922437176 -2 0.0202827453613281 2 Carbamidomethyl (C) _NETKKERC(Carbamidomethyl (C))EFY_ REV__ENSG00000105835|ENST00000222553|NAMPT;REV__ENST00000393618.5_1_7:105910735-105925330:-|nuORF;REV__ENST00000486949.5_1_7:105912936-105925330:-|nuORF;REV__ENST00000489358.5_1_7:105912543-105925330:-|nuORF;REV__ENST00000489732.1_1_7:105917445-105925330:-|nuORF 9.38312468134398 0.8308777417566128 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEAQQNA{M(Oxidation (M))|F}Y 12 -1 + 87.305 0.0 0.0 5.81 5.81 86.425 0.0 0.0 0.0 15.501896823007826 71.82048784621223 15.501896823007826 9.098233696509126 0 0.8182503180159344 0.0 1.5044321917401078 0.8494850021680094 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEAQQNA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEAQQGGA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEAQ[AG]NA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEA[AG]QNA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEA[AG][AG]NA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEAQ[AG]GGA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YEA[AG]QGGA{M(Oxidation (M))|F}Y;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}YE{[ET]|[MV]}PNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G[YK]EAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[YK]EAQQNA{M(Oxidation (M))|F}Y 5.81;5.2045;5.2045;5.2045;4.6007;4.6007;4.6007;4.3797;4.351;4.2265 -;-;-;-;-;-;-;-;-;- 965 1 1.658 67752.5 0.4300000071525574 1490 5152 6642 SUDHL4_400M_050219_2,6644 SUDHL4_400M_050219_2,6644,NETKKERCEFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6647 33.737 109.0 381420.0 25 0 27486.0 + 44234 YLHSQVVSV 9 73 516.2798515018811 1030.5451500705622 2 516.2802001833916 MULTI CID FTMS 0 0 0 6646 250240.09375 0.3968709688099009 8 -0.1043663024902343 1 Unmodified _YLHSQVVSV_ ENSG00000204267|ENST00000374897|TAP2;nc|ENSG00000204267|Q03519-2|TAP2 30.63653989081413 0.1413794767160703 6 {[QV]|[N{I|L}]|[RA]|[KV]}W{[QS]|[NT]}VVSV 9 2 + 32.865 0.0 0.0 3.1891 3.1891 74.548 0.0 0.0 0.0 2.922152515121226 18.885760000673464 2.922152515121226 4.101744650890499 0 0.7429928190999391 0.0 0.7742275032520141 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}W{[QS]|[NT]}VVSV;[HS][YQ]{I|L}VVSV;{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))Q]{I|L}VVSV;[HS]T{I|L}[VS]Y[KP];[HS]T[VS]{I|L}Y[KP] 3.1891;2.7911;1.9748;0.44251;0.056369 -;-;-;-;- 103 1 1.658 33705.7 1.0 1491 5154 6646 SUDHL4_400M_050219_2,6647 SUDHL4_400M_050219_2,6647,YLHSQVVSV False True YLHSQVVSV 33.737025 516.280200183392 3261948.5 6646.0 nc|ENSG00000204267|Q03519-2|TAP2;;ENSG00000204267|ENST00000374897|TAP2 4.917714913686116 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6648 33.745 439.0 148640.0 25 0 16000.0 + 33750 SLAKIYTEA 9 103 498.2744346211816 994.5343163091632 2 498.2732421755791 MULTI CID FTMS 0 0 0 6646 84011.7578125 0.6876514458322944 1 -0.0126609802246093 2 Unmodified _SLAKIYTEA_ ENSG00000184897|ENST00000333762|H1-10 38.17557092003332 0.0854718145212029 6 {[TV]|[{I|L}S]}A{M(Oxidation (M))|F}T 5 5 52.817 0.0 0.0 5.3108 0.0 0.0 0.0 472.2562349908813 472.2562349908813 39.71848749616356 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.805462187404089 0.0 {[TV]|[{I|L}S]}A{M(Oxidation (M))|F}T 5.3108 - 172 + 1 1.658 53092.1 1.0 1492 5154 6646 SUDHL4_400M_050219_2,6648 SUDHL4_400M_050219_2,6648,SLAKIYTEA True True SLAKIYTEA 33.744821 498.273242175579 564774.6875 6646.0 ENSG00000184897|ENST00000333762|H1-10 4.212554534276326 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6650 33.763 800.0 166430.0 25 0 8291.1 + 13680 HQFLQNEY 8 131 539.7514946916269 1077.4884364500538 2 539.7515746951103 MULTI CID FTMS 0 0 0 6649 119469.578125 0.1135836857285093 -9 0.1274185180664062 1 Unmodified _HQFLQNEY_ ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1 64.23631603340823 0.116217441302575 6 [AG]H{M(Oxidation (M))|F}{I|L}QNEY 9 3 + 76.225 0.0 0.0 7.0743 7.0743 84.004 0.0 0.0 0.0 1.4955215768539176 60.51161341931383 1.4955215768539176 2.221894378550786 0 0.7302046884880938 1.2218487496163564 0.0 1.2302046884880935 [AG]H{M(Oxidation (M))|F}{I|L}QNEY;[HQ]{M(Oxidation (M))|F}{I|L}QNEY;[AG]H{M(Oxidation (M))|F}{I|L}QGGEY;[AG]{M(Oxidation (M))|F}H{I|L}QNEY;[HQ]{M(Oxidation (M))|F}{I|L}QGGEY;[HQ]{M(Oxidation (M))|F}{I|L}[AG]NEY;[AG]H{M(Oxidation (M))|F}{I|L}[AG]NEY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{I|L}QNEY;[AG]{M(Oxidation (M))|F}{I|L}HQNEY;[AG]{I|L}{M(Oxidation (M))|F}HQNEY 7.0743;6.8681;6.2197;6.1078;6.0085;6.0085;5.8664;5.5997;5.4591;5.3341 -;+;-;-;-;-;-;-;-;- + 1034 1 1.658 104251.9 0.5 1493 5155 6649 SUDHL4_400M_050219_2,6650 SUDHL4_400M_050219_2,6650,HQFLQNEY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6651 33.768 282.0 263120.0 25 0 43651.0 + 13469 HLSVEDRE 8 79 492.7429062866794 983.4712596401588 2 492.7430908083916 MULTI CID FTMS 0 0 0 6649 123356.1953125 0.749394678524652 -9 0.1274185180664062 2 Unmodified _HLSVEDRE_ REV__ENSG00000155827|ENST00000389120|RNF20 9.347437153973935 0.7675937258251505 6 {I|L} 1 -1 10.969 0.0 0.0 1.1153 0.0 0.0 852.376515843087 0.0 852.376515843087 0.0 3.4948500216800937 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1153 + + 27 + 1 1.658 62930.6 1.0 1494 5155 6649 SUDHL4_400M_050219_2,6651 SUDHL4_400M_050219_2,6651,HLSVEDRE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6653 33.779 471.0 267220.0 25 0 25831.0 + + 23323 YEDISRGL 8 107 477.2926588682337 952.5707648032676 2 477.2923766970634 MULTI CID FTMS 0 0 0 6652 184955.296875 0.0968602414039488 53 -1.4467430114746094 1 Unmodified _LTALKTLHG_ nc|ENSG00000105369|P11912-2|CD79A;ENSG00000105369|ENST00000221972|CD79A 16.149105407346934 0.3995459350917656 6 {I|L}TAP 4 -1 52.423 0.0 0.0 5.5033 0.0 0.0 0.0 567.3265270363136 567.3265270363136 28.24153794511119 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 {I|L}TAP 5.5033 - 148 + 1 1.658 99863.4 1.0 1495 5156 6652 SUDHL4_400M_050219_2,6653 SUDHL4_400M_050219_2,6653,LTALKTLHG False False YEDISRGL 33.778581 477.292376697063 751447.4375 6652.0 nc|ENSG00000105369|P11912-2|CD79A;;ENSG00000105369|ENST00000221972|CD79A 1.3765876460820436 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6654 33.784 302.0 163940.0 25 0 16550.0 27121 PFLMGIPLE 9 78 508.77988973047206 1015.545226527744 2 508.7806579470634 MULTI CID FTMS 0 0 0 6652 154385.265625 0.3132147351267129 -14 0.3401451110839844 2 Unmodified _PFLMGIPLE_ ENST00000419435.5_1_3:193311166-193332514:+|nuORF 13.50788311687929 0.4710407108020397 6 YTPE 4 7 38.8 0.0 0.0 3.8206 0.0 0.0 507.30467421699376 0.0 507.30467421699376 0.0 25.49926291259105 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 YTPE 3.8206 - 70 1 1.658 46752.0 1.0 1496 5156 6652 SUDHL4_400M_050219_2,6654 SUDHL4_400M_050219_2,6654,PFLMGIPLE False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6655 33.791 384.0 153260.0 25 0 8283.4 + 2489 AQYEHDLEV 9 97 552.253539145566 1102.492525357932 2 552.2544433474541 MULTI CID FTMS 0 0 0 6652 97208.2109375 0.5194320978047565 -5 0.0637550354003906 3 Unmodified _AQYEHDLEV_ ENSG00000132341|ENST00000543796|RAN;ENST00000413691.2_1_4:174554896-174555010:-|nuORF;ENST00000455094.1_1_6:30454046-30454364:+|nuORF 21.53697664764585 0.2571576504437394 6 {[YC]|[HE]}YD{I|L}E[QA]V 9 6 + 34.319 0.0 0.0 3.1129 3.1129 69.375 0.0 0.0 0.0 5.752574989159957 11.96272488392666 5.752574989159957 0.4845500650402812 0 0.0 0.0 0.6237125054200234 0.0 {[YC]|[HE]}YD{I|L}E[QA]V;{[YC]|[HE]}YD{I|L}[QA]EV;{[YC]|[HE]}YD[QA]{I|L}EV;[HD]E{I|L}YE[QA]V;[HD]EY{I|L}E[QA]V;{[YC]|[HE]}D{I|L}YE[QA]V;{[YC]|[HE]}DY{I|L}E[QA]V;[HD]EY[QA]{I|L}EV;[HD]E{I|L}Y[QA]EV;[HD]EY{I|L}[QA]EV 3.1129;3.0689;3.0689;2.5911;2.5911;2.5668;2.5668;2.5471;2.5471;2.5471 -;-;-;-;-;-;-;-;-;- 465 1 1.658 49699.4 1.0 1497 5156 6652 SUDHL4_400M_050219_2,6655 SUDHL4_400M_050219_2,6655,AQYEHDLEV False True AQYEHDLEV 33.790994 552.254443347454 806398.1875 6652.0 ENST00000413691.2_1_4:174554896-174555010:-|nuORF;;ENST00000455094.1_1_6:30454046-30454364:+|nuORF;;ENSG00000132341|ENST00000543796|RAN 5.70249875386556 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6657 33.796 98.0 691260.0 25 0 108160.0 + 38441 TRSTAGLP 8 59 401.7231956913327 801.4318384494654 2 401.7232238650322 MULTI CID FTMS 0 0 0 6656 477590.8125 0.3836470993309442 8 -0.1088180541992187 1 Unmodified _TRSTAGLP_ REV__ENSG00000134917|ENST00000257359|ADAMTS8 2.889219685676258 0.8067950007271085 6 V 1 -1 7.6587 0.0 0.0 0.95563 0.0 0.0 59.04928172754007 640.2930855780966 699.3423673056367 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 V 0.95563 - 6 + 1 1.658 58909.4 1.0 1498 5157 6656 SUDHL4_400M_050219_2,6657 SUDHL4_400M_050219_2,6657,TRSTAGLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6660 33.809 393.0 333780.0 25 0 46572.0 + 15830 ISKALVAY 8 115 432.7632574577473 863.5119619822946 2 432.7632934451103 MULTI CID FTMS 0 0 0 6659 237716.171875 0.3102684554834375 -6 0.0717124938964843 1 Unmodified _ISKALVAY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000339471.8_1_19:39923915-39924228:-|nuORF 36.12702656103203 0.299085846329477 6 {I|L}S 2 6 32.574 0.0 0.0 3.7722 0.0 0.0 0.0 660.3724459283811 660.3724459283811 7.069370403192899 0.0 0.0 0.0 0 0.2396518287104437 0.9208187539523752 0.0 0.0 + {I|L}S 3.7722 + + 247 + 1 1.658 105196.3 1.0 1499 5159 6659 SUDHL4_400M_050219_2,6660 SUDHL4_400M_050219_2,6660,ISKALVAY False True ISKALVAY 33.809391 432.76329344511 3467989.75 6659.0 ENST00000339471.8_1_19:39923915-39924228:-|nuORF;;ENSG00000105193|ENST00000251453|RPS16 3.26661761601766 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6661 33.823 800.0 174660.0 25 0 8900.6 + 11457 GIFERTQTI 9 144 532.7881869673566 1063.5618210015132 2 532.7891723513603 MULTI CID FTMS 0 0 0 6659 110315.2265625 0.4874274779689606 -6 0.0717124938964843 2 Unmodified _GIFERTQTI_ REV__ENST00000528435.5_1_11:118175667-118182938:+|nuORF 29.081581746732265 0.1611639662936252 6 VA{M(Oxidation (M))|F}ED[RK]TV 9 -1 + 62.502 0.0 0.0 5.8766 5.8766 77.644 0.0 0.0 0.0 50.36175320500661 2.196596782814808 2.196596782814808 0.2287874528033739 0 0.3054621874040891 1.6989700043360187 0.5796896906561032 0.3807196863200844 VA{M(Oxidation (M))|F}ED[RK]TV;VA{M(Oxidation (M))|F}EDT[RK]V;G{I|L}{M(Oxidation (M))|F}ED[RK]TV;G{I|L}{M(Oxidation (M))|F}EDT[RK]V;VA{M(Oxidation (M))|F}ED[RK]S{I|L};G{I|L}{M(Oxidation (M))|F}ED[RK]S{I|L};V{M(Oxidation (M))|F}AEDT[RK]V;VA{M(Oxidation (M))|F}[DV][WK]TV;V{M(Oxidation (M))|F}AED[RK]TV;VA{M(Oxidation (M))|F}[{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}MV 5.8766;5.8551;5.5936;5.5721;5.4419;5.1588;5.0324;4.3218;4.2792;4.2096 -;-;-;-;-;-;-;-;-;- 525 + 1 1.658 109878.4 0.5400000214576721 1500 5159 6659 SUDHL4_400M_050219_2,6661 SUDHL4_400M_050219_2,6661,GIFERTQTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6664 33.837 385.0 589400.0 25 0 70374.0 -1 0 88 996.3026161098056 4976.476698216027 5 996.9051391482352 MULTI CID FTMS 0 0 0 6663 318153.34375 0.7352881975452373 4 -0.0726966857910156 1 6 CMQQQQE 7 -1 45.974 0.0 0.0 0.92382 0.0 0.0 0.0 4098.060006900712 4098.060006900712 38.9840322369416 0.0 0.0 0.0 0 1.1237125054200234 0.0 0.0 0.0 CMQQQQE 0.92382 - 201 + 1 1.655 148471.5 1.0 1501 5161 6663 SUDHL4_400M_050219_2,6664 SUDHL4_400M_050219_2,6664, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6667 33.849 352.0 484760.0 25 0 32349.0 + 14521 IGQIKRIL 8 121 470.8187708974813 939.6229888617628 2 470.8184387087822 MULTI CID FTMS 0 0 0 6666 284616.09375 0.1470079175634893 -7 0.0726814270019531 1 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 28.486842064014134 0.4448922141344407 6 {I|L}GQ{I|L}KR{I|L}{I|L} 8 -1 + 49.047 0.0 0.0 5.2199 5.2199 90.508 0.0 0.0 0.0 24.5609971201948 8.672137691284405 8.672137691284405 49.04737847600778 0 0.9929928190999392 1.6989700043360187 0.0 0.2742275032520141 {I|L}GQ{I|L}KR{I|L}{I|L} 5.2199 + + 503 + 1 1.655 132988.8 1.0 1502 5163 6666 SUDHL4_400M_050219_2,6667 SUDHL4_400M_050219_2,6667,IGQIKRIL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6668 33.858 470.0 203530.0 25 0 26423.0 + 14799 ILDQKINEV 9 129 536.3057179693155 1070.596883005431 2 536.3066284060478 MULTI CID FTMS 0 0 0 6666 155151.875 0.7712990370296895 -4 0.0405769348144531 2 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 43.77239144664712 0.0547478964384323 6 {I|L}{I|L}DQ 4 5 58.276 0.0 0.0 5.4433 0.0 0.0 0.0 598.3229464166624 598.3229464166624 29.11613682233437 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.7302046884880937 + {I|L}{I|L}DQ 5.4433 + + 1285 + 1 1.655 76572.0 1.0 1503 5163 6666 SUDHL4_400M_050219_2,6668 SUDHL4_400M_050219_2,6668,ILDQKINEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6669 33.871 800.0 100510.0 25 0 16121.0 + -1 RGCSCLECIC 10 97 600.7362293424051 1199.45790575161 2 600.7360717654228 MULTI CID FTMS 0 0 0 6666 100105.8984375 1.0 0 0.0 3 2 Carbamidomethyl (C) _RGC(Carbamidomethyl (C))SC(Carbamidomethyl (C))LECIC_ REV__ENSG00000155875|ENST00000380534|SAXO1 3.944395688203298 0.708391353636983 6 ACEVTH{[QG]|[NA]}{I|L} 9 -1 36.621 0.0 0.0 3.0532 0.0 0.0 243.01899835616456 0.0 243.01899835616456 0.0 4.938871815334956 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.4247425010840047 ACEVTH{[QG]|[NA]}{I|L} 3.0532 - 400 + 1 1.655 60980.0 0.6100000143051147 1504 5163 6666 SUDHL4_400M_050219_2,6669 SUDHL4_400M_050219_2,6669,RGCSCLECIC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6671 33.883 527.0 227240.0 25 0 17613.0 -1 GELTGEVRM 9 144 504.24407015456586 1006.4735873759316 2 504.2424194216728 MULTI CID FTMS 0 0 0 6670 70820.0546875 0.1370009904006162 13 -0.3561363220214844 1 Oxidation (M) _GELTGEVRM(Oxidation (M))_ ENSG00000128591|ENST00000325888|FLNC;nc|ENSG00000128591|Q14315-2|FLNC 23.78978130925829 0.2284941198415988 6 {[DA]|[EG]}{I|L}TW 5 -1 45.93 0.0 0.0 4.5634 0.0 0.0 0.0 417.1927889459594 417.1927889459594 31.203557697505268 0.0 0.0 0.0 0 1.274227503252014 1.0969100130080565 0.0 0.0 {[DA]|[EG]}{I|L}TW 4.5634 - 410 + 1 1.655 90988.0 1.0 1505 5164 6670 SUDHL4_400M_050219_2,6671 SUDHL4_400M_050219_2,6671,GELTGEVRM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6672 33.893 546.0 186060.0 25 0 7335.8 + 26554 NVIRDAVTY 9 142 525.7813973362405 0 525.7803832888603 PEAK CID FTMS 0 0 0 6670 124679.0078125 0.3743281805754538 -3 0.0441474914550781 2 Unmodified _NVIRDAVTY_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 43.77239144664712 0.0487019148086553 6 TV[R{I|L}]EA 6 5 32.853 0.0 0.0 3.1302 0.0 0.0 181.0719976980684 196.07312952213127 377.1451272201997 0.0 0.0 0.0 0.0 0 2.004432191740108 0.0 0.805462187404089 0.3494850021680094 TV[R{I|L}]EA 3.1302 - 415 + 1 1.655 81474.4 1.0 1506 5164 6670 SUDHL4_400M_050219_2,6672 SUDHL4_400M_050219_2,6672,NVIRDAVTY True True NVIRDAVTY 33.892662 525.78038328886 1647357.125 6670.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 5.414608001708984 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6673 33.9 410.0 240850.0 25 0 19856.0 29191 QGFFFWGGS 9 112 516.7302584285678 1031.4459639239356 2 516.7301513552666 MULTI CID FTMS 0 0 0 6670 149984.15625 0.3893665262257133 -28 0.5123100280761719 3 Unmodified _QGFFFWGGS_ ENST00000328381.9_2_17:29298258-29315050:+|nuORF 26.88365393820708 0.1891292719743517 6 {[QG]|[NA]}{M(Oxidation (M))|F} 3 6 27.593 0.0 0.0 2.6752 0.0 0.0 0.0 696.2738807542668 696.2738807542668 12.49528407545305 0.0 0.0 0.0 0 1.0 0.638272163982407 0.0 0.4247425010840047 + {[QG]|[NA]}{M(Oxidation (M))|F} 2.6752 + + 396 1 1.655 78793.9 1.0 1507 5164 6670 SUDHL4_400M_050219_2,6673 SUDHL4_400M_050219_2,6673,QGFFFWGGS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6675 33.907 231.0 275230.0 25 0 20159.0 + 30796 RIFGTDSQY 9 106 543.7645792100119 1085.5146054868237 2 543.7647582888603 MULTI CID FTMS 0 0 0 6674 158237.640625 0.2300254910319393 11 -0.2928237915039062 1 Unmodified _RIFGTDSQY_ ENSG00000052802|ENST00000261507|MSMO1;nc|ENSG00000052802|Q15800-2|MSMO1 31.26834338654808 0.1333407332142048 6 [R{I|L}]{M(Oxidation (M))|F}GTDSQY 9 0 + 62.576 0.0 0.0 5.7646 5.7646 87.461 0.0 0.0 0.0 15.21961134720094 49.81148690250006 15.21961134720094 9.208187539523747 0 0.5 1.0457574905606752 0.3807196863200844 0.0 + + [R{I|L}]{M(Oxidation (M))|F}GTDSQY;[R{I|L}]{M(Oxidation (M))|F}GTDS[AG]Y;[R{I|L}]{M(Oxidation (M))|F}GT[NS]EY;[AG]{[QN]|[E{I|L}]|[KN]}[YR]SQY;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[PG]{[QS]|[NT]}{M(Oxidation (M))|F}Y 5.7646;4.9163;3.4826;2.1857;0.45245 +;-;-;-;- + 220 1 1.655 52891.5 1.0 1508 5165 6674 SUDHL4_400M_050219_2,6675 SUDHL4_400M_050219_2,6675,RIFGTDSQY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6676 33.912 301.0 242520.0 25 0 35079.0 -1 0 95 547.3326971433949 546.3254206767948 1 550.3407470583916 MULTI CID FTMS 0 0 0 6674 256174.796875 0.9849914725163178 1 -0.0122528076171875 2 6 Y 1 -1 11.259 0.0 0.0 2.0609 0.0 0.0 365.2511236570666 0.0 365.2511236570666 0.0 6.654966095207122 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.0609 - 7 + 1 1.655 62014.3 1.0 1509 5165 6674 SUDHL4_400M_050219_2,6676 SUDHL4_400M_050219_2,6676, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6678 33.92 286.0 247740.0 25 0 17317.0 -1 0 72 918.41898582269 1834.82341871218 2 918.9211303591728 MULTI CID FTMS 0 0 0 6677 315526.4375 0.5447626132515999 -7 0.1122474670410156 1 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{NN|[MP]|[D{I|L}]|[EV]}NADQ 9 -1 44.429 0.0 0.0 2.4214 0.0 0.0 0.0 818.3831270807249 818.3831270807249 27.50024819664178 0.0 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.6747425010840047 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{NN|[MP]|[D{I|L}]|[EV]}NADQ 2.4214 - 498 + 1 1.655 50108.2 1.0 1510 5166 6677 SUDHL4_400M_050219_2,6678 SUDHL4_400M_050219_2,6678, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6679 33.928 430.0 167470.0 25 0 25547.0 31368 RNLKRLHFD 9 105 400.2312265464807 0 400.2312805056572 PEAK CID FTMS 0 0 0 6677 125672.359375 1.0 0 0.0 2 Unmodified _RNLKRLHFD_ ENSG00000139323|ENST00000313546|POC1B;ENST00000539190.6_1_12:89855074-89919672:-|nuORF;ENST00000547496.5_1_12:89853476-89885774:-|nuORF;nc|ENSG00000139323|Q8TC44-2|POC1B 2.059750862983233 0.3444685223463734 6 G 1 9 1.5938 0.0 0.0 0.19961 0.0 0.0 480.3422310697208 258.0662935846313 738.408524654352 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19961 - 2 + 1 1.655 59901.1 1.0 1511 5166 6677 SUDHL4_400M_050219_2,6679 SUDHL4_400M_050219_2,6679,RNLKRLHFD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6680 33.941 800.0 89744.0 25 0 6785.7 25856 NLEAWRETFPQ 11 100 695.8391091950422 1389.6636654568842 2 695.8400146365166 MULTI CID FTMS 0 0 0 6677 82428.171875 0.7564246373991649 -1 0.0122528076171875 3 Unmodified _NLEAWRETFPQ_ ENSG00000115705|ENST00000329066|TPO;nc|ENSG00000115705|P07202-2|TPO;nc|ENSG00000115705|P07202-3|TPO;nc|ENSG00000115705|P07202-4|TPO;nc|ENSG00000115705|P07202-5|TPO;nc|ENSG00000115705|P07202-7|TPO;nc|ENSG00000115705|P07202-8|TPO 31.26834338654808 0.3580123756476716 6 {[QV]|[N{I|L}]|[RA]|[KV]}N 3 9 37.492 0.0 0.0 2.6979 0.0 0.0 0.0 1045.4707387813562 1045.4707387813562 -3.910553545553768 0.0 -3.910553545553768 0.0 0 1.0 2.0 0.0 0.3054621874040891 {[QV]|[N{I|L}]|[RA]|[KV]}N 2.6979 - 245 1 1.655 55262.6 0.4799999892711639 1512 5166 6677 SUDHL4_400M_050219_2,6680 SUDHL4_400M_050219_2,6680,NLEAWRETFPQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6683 33.962 800.0 223960.0 25 0 27025.0 -1 IVKMTMPQTL 10 153 589.3189487873167 1176.6233446414333 2 589.3184692263603 MULTI CID FTMS 0 0 0 6682 234103.984375 0.1043967680251653 -5 0.1048316955566406 1 Oxidation (M) _IVKM(Oxidation (M))TMPQTL_ ENSG00000115750|ENST00000263663|TAF1B;nc|ENSG00000115750|Q53T94-2|TAF1B 30.63653989081413 0.2803493085145199 6 {I|L}TQV[PG]QT{I|L} 9 -1 66.754 0.0 0.0 5.6733 0.0 0.0 221.09654744484925 0.0 221.09654744484925 0.0 22.610995488244868 0.0 0.0 0 0.0 0.0 2.2104093769761874 2.4049471895720984 {I|L}TQV[PG]QT{I|L} 5.6733 - 8469 + 1 1.655 133451.3 0.8899999856948853 1513 5168 6682 SUDHL4_400M_050219_2,6683 SUDHL4_400M_050219_2,6683,IVKMTMPQTL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6684 33.969 428.0 222920.0 25 0 34030.0 + 10281 FQYSKSPSL 9 104 528.7715979715837 1055.5286430099673 2 528.7720825076103 MULTI CID FTMS 0 0 0 6682 139602.71875 0.987670389556438 -2 0.0331611633300781 2 Unmodified _FQYSKSPSL_ ENSG00000258890|ENST00000556440|CEP95;ENST00000553956.6_1_17:62527116-62533894:+|nuORF;nc|ENSG00000258890|Q96GE4-2|CEP95 32.78568957990786 0.1150597335874693 6 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YSKSPS{I|L} 9 0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} + + 34.226 9.4762 3.4443 3.2426 3.2426 52.054 0.0 0.0 0.0 0.0 -7.52871106733722 -7.52871106733722 0.0 0 0.5 0.0 0.75 0.0 + + {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}YSKSPS{I|L} 3.2426 + + 338 + 1 1.655 77650.5 1.0 1514 5168 6682 SUDHL4_400M_050219_2,6684 SUDHL4_400M_050219_2,6684,FQYSKSPSL True True FQYSKSPSL 33.969236 528.77208250761 701912.0625 6682.0 nc|ENSG00000258890|Q96GE4-2|CEP95;;ENST00000553956.6_1_17:62527116-62533894:+|nuORF;;ENSG00000258890|ENST00000556440|CEP95 5.948604583740234 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6685 33.983 800.0 128320.0 25 0 13244.0 -1 0 111 406.7894051349628 811.5642573367256 2 406.7892944216728 MULTI CID FTMS 0 0 0 6682 129749.578125 0.2438195478142727 7 -0.2169952392578125 3 6 {I|L}G{I|L}K 4 -1 31.96 0.0 0.0 3.9381 0.0 0.0 0.0 397.2562960260376 397.2562960260376 21.246797553086232 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}G{I|L}K 3.9381 - 41 + 1 1.655 85990.7 0.6000000238418579 1515 5168 6682 SUDHL4_400M_050219_2,6685 SUDHL4_400M_050219_2,6685, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6687 33.988 34.0 1301000.0 25 0 86046.0 + 30974 RLASLQSEV 9 65 501.7822776313919 1001.5500023295838 2 501.7826415896416 MULTI CID FTMS 0 0 0 6686 1444998.5 0.3975612275878064 5 -0.1408538818359375 1 Unmodified _RLASLQSEV_ ENST00000397281.6_1_7:150065961-150066789:+|nuORF;ENST00000487455.1_1_7:150065323-150066789:+|nuORF 24.99096001346401 0.2132109383330889 6 {I|L}QSEV 5 4 49.196 0.0 0.0 4.912 0.0 0.0 427.2551136701188 0.0 427.2551136701188 0.0 37.51348757971677 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 + {I|L}QSEV 4.912 + + 42 1 1.655 42550.6 1.0 1516 5169 6686 SUDHL4_400M_050219_2,6687 SUDHL4_400M_050219_2,6687,RLASLQSEV False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6688 33.994 329.0 204790.0 25 0 16344.0 + 33043 SEPQPSMFY 9 103 543.2327117279627 1084.4508705227254 2 543.2309448122978 MULTI CID FTMS 0 0 0 6686 119163.9765625 1.0 0 0.0 2 Unmodified _SEPQPSMFY_ ENSG00000107263|ENST00000683357|RAPGEF1;nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1 11.640296217721598 0.521594087909532 6 {M(Oxidation (M))|F}Y 2 7 22.959 0.0 0.0 2.1171 0.0 0.0 756.3092822432317 0.0 756.3092822432317 0.0 6.136218907515314 0.0 0.0 0 0.5 0.0 0.0 0.0 + {M(Oxidation (M))|F}Y 2.1171 + + 190 + 1 1.655 57403.5 1.0 1517 5169 6686 SUDHL4_400M_050219_2,6688 SUDHL4_400M_050219_2,6688,SEPQPSMFY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6689 33.995 70.0 609200.0 25 0 104500.0 + + 20667 ILQDRLNQV 9 60 549.8165535619423 1097.6185541906846 2 549.8166381716728 MULTI CID FTMS 0 0 0 6686 222752.78125 0.9856637359162158 -1 0.037811279296875 3 Unmodified _LLQRINDQV_ ENSG00000094804|ENST00000209728|CDC6 17.11289562659939 0.3734572693229295 6 {I|L}{I|L}Q 3 -1 52.435 0.0 0.0 4.7772 0.0 0.0 0.0 740.3699434869749 740.3699434869749 46.95046257204389 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3494850021680094 {I|L}{I|L}Q 4.7772 + + 6 + 1 1.655 36992.3 1.0 1518 5169 6686 SUDHL4_400M_050219_2,6689 SUDHL4_400M_050219_2,6689,LLQRINDQV False False ILQDRLNQV 33.995474 549.816638171673 1082896.625 6686.0 ENSG00000094804|ENST00000209728|CDC6 3.4264132181803384 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6690 34.0 237.0 418750.0 25 0 44417.0 38653 TTIKAFFPKK 10 115 394.24112407471966 1179.701542824359 3 394.2417785525322 MULTI CID FTMS 0 0 0 6686 212731.78125 0.0258207663531516 -7 0.1465072631835937 4 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 32.78568957990786 0.2337485590374503 6 TT{I|L}KY{I|L}WKK 9 4 + 87.59 0.0 0.0 7.4248 7.4248 87.991 0.0 0.0 0.0 69.68555973876605 16.8348435778082 16.8348435778082 5.228787452803374 0 0.7302046884880937 1.5228787452803376 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK;TT{I|L}KY{I|L}KWK;TT{I|L}KY{I|L}K{[NV]|[RG]}T;TT{I|L}KK[Y{I|L}]WK;TT{I|L}KK[Y{I|L}]{[NV]|[RG]}T 7.4248;6.9816;5.7805;4.8142;3.9359 -;-;-;-;- 324 + 1 1.655 84238.8 1.0 1519 5169 6686 SUDHL4_400M_050219_2,6690 SUDHL4_400M_050219_2,6690,TTIKAFFPKK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6692 34.007 169.0 328590.0 25 0 17814.0 + 13681 HQFLQNEY 8 83 539.7514946916269 1077.4884364500538 2 539.7516357302666 MULTI CID FTMS 0 0 0 6691 403678.9375 0.3837909390141539 6 -0.1927299499511718 1 Unmodified _HQFLQNEY_ ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1 34.10243960390752 0.3329570729325616 6 [AG]H{M(Oxidation (M))|F}{I|L}QNEY 9 3 + 61.609 0.0 0.0 5.7178 5.7178 78.367 0.0 0.0 0.0 1.1704601275868498 14.973024840566469 1.1704601275868498 1.1704601275868498 0 0.5 1.154901959985743 0.0 0.4247425010840047 [AG]H{M(Oxidation (M))|F}{I|L}QNEY;[HQ]{M(Oxidation (M))|F}{I|L}QNEY;[AG]H{M(Oxidation (M))|F}{I|L}[AG]NEY;[AG]H{M(Oxidation (M))|F}{I|L}QGGEY;[HQ]{M(Oxidation (M))|F}{I|L}[AG]NEY;[HQ]{M(Oxidation (M))|F}{I|L}QGGEY;[HQ]{M(Oxidation (M))|F}{I|L}[AG]GGEY;[AG]H{M(Oxidation (M))|F}{I|L}[AG]GGEY;[YE]R[YR]EY;[{M(Oxidation (M))|F}V][RH]{NN|[MP]|[D{I|L}]|[EV]}EY 5.7178;5.6092;4.8632;4.8632;4.7496;4.7496;3.895;3.6185;2.4318;0.83536 -;+;-;-;-;-;-;-;-;- + 185 1 1.655 45519.3 1.0 1520 5170 6691 SUDHL4_400M_050219_2,6692 SUDHL4_400M_050219_2,6692,HQFLQNEY False True HQFLQNEY 34.007096 539.751635730267 8674173.0 6691.0 ENSG00000167986|ENST00000301764|DDB1;;nc|ENSG00000167986|Q16531-2|DDB1 7.361026763916016 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6693 34.021 800.0 161560.0 25 0 12933.0 + -1 WLNQYCSHAFY 11 120 744.8229342083177 1487.6313154834354 2 744.8244506716728 MULTI CID FTMS 0 0 0 6691 139483.234375 1.0 0 0.0 2 Carbamidomethyl (C) _WLNQYC(Carbamidomethyl (C))SHAFY_ REV__ENSG00000091128|ENST00000388781|LAMB4;REV__ENST00000475469.1_1_7:107703197-107763609:-|nuORF;REV__nc|ENSG00000091128|A4D0S4-3|LAMB4 15.248480904072842 0.7179608125786238 6 HDEAQQDA{M(Oxidation (M))|F}Y 10 -1 87.358 0.0 0.0 5.8723 0.0 0.0 265.1434498517594 0.0 265.1434498517594 0.0 50.59897309212083 0.0 0.0 0 0.8807196863200843 0.0 0.0 1.555462187404089 HDEAQQDA{M(Oxidation (M))|F}Y 5.8723 - 7897 1 1.655 93172.9 0.5199999809265137 1521 5170 6691 SUDHL4_400M_050219_2,6693 SUDHL4_400M_050219_2,6693,WLNQYCSHAFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6694 34.026 248.0 548550.0 25 0 94012.0 + 14932 ILMEHIHKL 9 128 383.8863160393483 1148.637118718245 3 384.2205078005791 MULTI CID FTMS 0 0 0 6691 215329.921875 0.048408545039769 -5 0.1000938415527343 3 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 42.312485326615175 0.0627620958981271 6 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L} 9 0 + 80.233 0.0 0.0 6.9851 6.9851 84.733 0.0 0.0 0.0 36.47817481888637 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.7302046884880938 2.0 0.7134679910804405 0.2059771852360797 + + {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}H{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C))R]K;{I|L}{I|L}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}P{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L};{I|L}{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQK{I|L};{I|L}{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}QQ{I|L}K 6.9851;6.723;4.1984;4.1226;3.6033;3.3412 +;-;-;-;-;- + 939 + 1 1.655 110562.6 1.0 1522 5170 6691 SUDHL4_400M_050219_2,6694 SUDHL4_400M_050219_2,6694,ILMEHIHKL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6695 34.032 331.0 178820.0 25 0 20667.0 42547 VTNSTVTNI 9 92 474.754012432439 947.493471931678 2 474.7534057497978 MULTI CID FTMS 0 0 0 6691 151182.640625 1.0 0 0.0 4 Unmodified _VTNSTVTNI_ ENST00000501122.2_1_11:65211032-65211398:+|nuORF 20.453626601364224 0.2830276176381075 6 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QQS{I|L} 8 7 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Q + + 24.57 20.942 3.4828 2.5931 2.5931 51.054 0.0 0.0 0.0 0.0 16.76574883999981 0.0 0.0 0 0.0 0.0 0.7887254899964358 0.0 [{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}QQS{I|L} 2.5931 - 127 + 1 1.655 52780.7 1.0 1523 5170 6691 SUDHL4_400M_050219_2,6695 SUDHL4_400M_050219_2,6695,VTNSTVTNI False True TLNSSVQSI 34.031563 474.753405749798 5040269.0 6691.0 nc|ENSG00000120690|P32519-2|ELF1;;ENSG00000120690|ENST00000239882|ELF1 2.235913634300232 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6697 34.037 138.0 420440.0 25 0 43692.0 9316 FIHDKPFI 8 81 508.77988973047206 1015.545226527744 2 508.7800475955009 MULTI CID FTMS 0 0 0 6696 444025.40625 0.9008327280787088 1 -0.0111351013183593 1 Unmodified _FIHDKPFI_ ENSG00000197928|ENST00000598513|ZNF677 29.081581746732265 0.4323690340403521 6 RAGTPE 6 7 51.133 0.0 0.0 5.035 0.0 0.0 386.2160511701188 0.0 386.2160511701188 0.0 29.7062251842808 0.0 0.0 0 0.4247425010840047 0.0 0.75 0.0 RAGTPE 5.035 - 96 1 1.655 54593.1 1.0 1524 5171 6696 SUDHL4_400M_050219_2,6697 SUDHL4_400M_050219_2,6697,FIHDKPFI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6698 34.043 319.0 248840.0 25 0 35500.0 + 15965 ITAPPSRVL 9 91 477.2926588682337 952.5707648032676 2 477.2923766970634 MULTI CID FTMS 0 0 0 6696 98378.78125 0.0515205169135617 68 -1.9529991149902344 2 Unmodified _ITAPPSRVL_ ENSG00000099194|ENST00000370355|SCD 29.84058131909904 0.1515068451768857 6 {I|L}TAPP 5 4 56.414 0.0 0.0 5.9223 0.0 0.0 0.0 470.2738741510376 470.2738741510376 43.28077541642748 0.0 0.0 0.0 0 0.7742275032520141 1.5228787452803376 0.0 0.0 + {I|L}TAPP 5.9223 + + 95 + 1 1.655 64632.4 1.0 1525 5171 6696 SUDHL4_400M_050219_2,6698 SUDHL4_400M_050219_2,6698,ITAPPSRVL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6700 34.049 191.0 277620.0 25 0 43726.0 + 9513 FLDTSNQHL 9 76 537.7646902001854 1073.5148274671708 2 537.7649413943291 MULTI CID FTMS 0 0 0 6699 233932.734375 0.7031936029308158 3 -0.1195259094238281 1 Unmodified _FLDTSNQHL_ ENSG00000134061|ENST00000256447|CD180 39.94969957227396 0.0757326808254658 6 {M(Oxidation (M))|F}{I|L}DT[YR]{I|L}{M(Oxidation (M))|F} 8 5 + 51.106 0.0 0.0 4.7606 4.7606 77.795 0.0 0.0 0.0 37.4610832047906 2.518119729937993 2.518119729937993 3.0102999566398125 0 0.8807196863200843 0.0 0.4247425010840047 0.3807196863200844 {M(Oxidation (M))|F}{I|L}DT[YR]{I|L}{M(Oxidation (M))|F};{M(Oxidation (M))|F}{I|L}D[YR]T{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{M(Oxidation (M))|F}[YQ]{I|L}E;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DTN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HA] 4.7606;4.4802;4.0698;1.5309 -;-;-;- 154 + 1 1.655 48796.7 1.0 1526 5172 6699 SUDHL4_400M_050219_2,6700 SUDHL4_400M_050219_2,6700,FLDTSNQHL True True FLDTSNQHL 34.048925 537.764941394329 1492898.875 6699.0 ENSG00000134061|ENST00000256447|CD180 5.993128140767415 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6701 34.055 329.0 308830.0 25 0 22900.0 + 14933 ILMEHIHKL 9 107 575.3257793259138 1148.6370057186275 2 575.3257324099541 MULTI CID FTMS 0 0 0 6699 212995.234375 0.1586336306911553 -3 0.0596580505371093 2 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 79.59630418116434 0.0176145593575188 6 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}H{I|L}K 9 2 + 106.1 0.0 0.0 9.2369 9.2369 96.194 0.0 0.0 0.0 60.20303756120384 14.730749808046326 14.730749808046326 12.403626894942434 0 1.960409376976188 2.0 1.066901560044258 0.3252574989159953 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}H{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}E{I|L}HH{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}[C(Carbamidomethyl (C))R]{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}HHK;{I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}EHH{I|L}K{I|L};{I|L}{I|L}{M(Oxidation (M))|F}EHHK{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[RD]{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}D]|MM}R{I|L}{I|L}{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[RD]{I|L}{M(Oxidation (M))|F}{I|L}{I|L} 9.2369;8.1571;6.5583;5.633;5.3774;4.7888;4.4622;4.3288;3.7066;3.331 -;-;-;-;+;-;-;-;-;- + 1568 + 1 1.655 80919.6 1.0 1527 5172 6699 SUDHL4_400M_050219_2,6701 SUDHL4_400M_050219_2,6701,ILMEHIHKL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6702 34.059 239.0 303640.0 25 0 92047.0 -1 0 85 492.26219422128514 491.2549177546852 1 493.2650024294853 MULTI CID FTMS 0 0 0 6699 195044.890625 1.0 0 0.0 3 6 DWT 3 -1 11.382 0.0 0.0 2.317 0.0 0.0 71.07422835517734 0.0 71.07422835517734 0.0 0.1232932533172377 0.0 0.0 0 0.3935078169319297 0.0 0.0 0.0 DWT 2.317 - 27 1 1.655 62699.7 1.0 1528 5172 6699 SUDHL4_400M_050219_2,6702 SUDHL4_400M_050219_2,6702, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6703 34.073 800.0 81355.0 25 0 6172.7 -1 HLLWFEQWCLQ 11 98 780.3774365427556 1558.7403201523111 2 780.3788940310478 MULTI CID FTMS 0 0 0 6699 93912.90625 0.7600748943178754 -3 0.0596580505371093 4 Carbamidomethyl (C) _HLLWFEQWC(Carbamidomethyl (C))LQ_ ENSG00000142207|ENST00000382751|URB1 20.41453444215458 0.6105011870913812 6 PN{I|L}NEER{[RE]|[WV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 12 -1 + 99.505 0.0 0.0 6.3837 6.3837 79.451 0.0 0.0 0.0 13.06856174962121 12.905430559709956 12.905430559709956 0.4706661192675767 0 2.20597718523608 1.3010299956639813 0.0 1.1861818737241734 PN{I|L}NEER{[RE]|[WV]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;PN{I|L}NEERA[DV]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;[NP]{I|L}NE{[NV]|[RG]}{[CP]|[EA]}DG{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NE{[NV]|[RG]}[WE]G{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NE{[NV]|[RG]}WW{M(Oxidation (M))|F}{I|L}K;[NP]{I|L}N[HM]HHDG{M(Oxidation (M))|F}{I|L}K;[NP]{I|L}N[HM]REE[YE]K;{[QV]|[N{I|L}]|[RA]|[KV]}PNE{[NV]|[RG]}{[CP]|[EA]}DG{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNE{[NV]|[RG]}[WE]G{M(Oxidation (M))|F}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNE{[NV]|[RG]}WW{M(Oxidation (M))|F}{I|L}K 6.3837;6.3535;5.5453;5.3106;5.0776;4.9097;4.734;3.77;3.5354;3.3024 -;-;-;-;-;-;-;-;-;- 1534 + 1 1.655 50378.0 0.4699999988079071 1529 5172 6699 SUDHL4_400M_050219_2,6703 SUDHL4_400M_050219_2,6703,HLLWFEQWCLQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6704 34.087 800.0 79717.0 25 0 14874.0 + -1 LMAPAPSTV 9 49 901.863661899054 4504.281927162269 5 902.2661010622978 MULTI CID FTMS 0 0 0 6699 60477.71484375 0.7736916180540863 4 -0.1499404907226562 5 ENSG00000155090|ENST00000285407|KLF10;nc|ENSG00000155090|Q13118-2|KLF10 6 A 1 -1 5.4846 0.0 0.0 0.12176 0.0 0.0 3862.943073257776 567.2799776666624 4430.223050924438 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.12176 - 7 + 1 1.655 50656.5 0.3799999952316284 1530 5172 6699 SUDHL4_400M_050219_2,6704 SUDHL4_400M_050219_2,6704, False False LMAPAPSTV 34.087073 902.266101062298 476984.21875 6699.0 ENSG00000155090|ENST00000285407|KLF10;;nc|ENSG00000155090|Q13118-2|KLF10 4.631538073221843 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6706 34.098 475.0 241710.0 25 0 41519.0 + 15831 ISKALVAY 8 106 432.7632574577473 863.5119619822946 2 432.7628661990166 MULTI CID FTMS 0 0 0 6705 162194.625 0.2116973169706245 8 -0.3093490600585937 1 Unmodified _ISKALVAY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000339471.8_1_19:39923915-39924228:-|nuORF 26.88365393820708 0.4786498634179528 6 {[TV]|[{I|L}S]}KAVA{I|L}Y 8 2 + 21.741 0.0 0.0 2.5177 2.5177 75.958 0.0 0.0 0.0 6.167666215368321 3.952101040696018 3.952101040696018 6.989700043360191 0 0.3182503180159344 0.8538719643217619 0.2887254899964357 0.0 {[TV]|[{I|L}S]}KAVA{I|L}Y;{[TV]|[{I|L}S]}KA{I|L}G{I|L}Y;{[TV]|[{I|L}S]}KAAV{I|L}Y;{[TV]|[{I|L}S]}KA{I|L}AVY;{[TV]|[{I|L}S]}KAA{I|L}VY;{[VA]|[{I|L}G]}{I|L}KSA{I|L}Y;{[VA]|[{I|L}G]}{I|L}AKS{I|L}Y;[KS]{I|L}AVA{I|L}Y;{[VA]|[{I|L}G]}[KT]VA{I|L}Y;{[VA]|[{I|L}G]}{I|L}AKTVY 2.5177;1.7083;1.6166;1.5044;1.4127;1.1377;1.0602;1.0539;1.0112;0.85624 -;-;-;-;-;-;-;-;-;- 195 1 1.655 90955.1 1.0 1531 5173 6705 SUDHL4_400M_050219_2,6706 SUDHL4_400M_050219_2,6706,ISKALVAY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6707 34.102 215.0 244160.0 25 0 21064.0 + 24305 AMAPGTVTV 9 87 431.7206928584692 861.4268327837384 2 431.7203552126884 MULTI CID FTMS 0 0 0 6705 178341.328125 0.9353804298120788 1 -0.0368232727050781 2 Unmodified _MDAINVLS_ nc|ENSG00000066827|Q9P243-2|ZFAT;ENST00000523243.5_1_8:135490727-135577256:-|nuORF;ENSG00000066827|ENST00000377838|ZFAT;nc|ENSG00000066827|Q9P243-4|ZFAT 28.486842064014134 0.4448922141344407 6 {[TV]|[{I|L}S]}[PG][CS]VTV 9 8 {[TV]|[{I|L}S]}[PG][CS]V + + 16.722 5.5357 0.86051 1.9412 1.9412 50.343 0.0 0.0 0.0 0.0 -1.4659125070036083 -1.4659125070036083 0.0 0 0.0 0.0 0.2742275032520141 0.0 {[TV]|[{I|L}S]}[PG][CS]VTV 1.9412 - 75 + 1 1.655 44540.8 1.0 1532 5173 6705 SUDHL4_400M_050219_2,6707 SUDHL4_400M_050219_2,6707,MDAINVLS False False AMAPGTVTV 34.102075 431.720355212688 1029567.625 6705.0 nc|ENSG00000066827|Q9P243-2|ZFAT;;ENST00000523243.5_1_8:135490727-135577256:-|nuORF;;ENSG00000066827|ENST00000377838|ZFAT;;nc|ENSG00000066827|Q9P243-4|ZFAT 2.7923762003580728 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6708 34.11 447.0 171040.0 25 0 13185.0 + 26024 NLYPGNEGY 9 105 513.7298698928272 1025.4451868524543 2 513.7302734255791 MULTI CID FTMS 0 0 0 6705 95968.0703125 1.0 0 0.0 3 Unmodified _NLYPGNEGY_ ENSG00000102710|ENST00000350612|SUPT20H;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;nc|ENSG00000102710|Q8NEM7-3|SUPT20H 15.847184025352805 0.4077185912009129 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y 3 6 25.29 0.0 0.0 2.4663 0.0 0.0 0.0 632.2311420128636 632.2311420128636 8.836805933051153 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}Y 2.4663 + + 184 1 1.655 64869.6 1.0 1533 5173 6705 SUDHL4_400M_050219_2,6708 SUDHL4_400M_050219_2,6708,NLYPGNEGY False True NLYPGNEGY 34.110021 513.730273425579 418687.3125 6705.0 nc|ENSG00000102710|Q8NEM7-3|SUPT20H;;nc|ENSG00000102710|Q8NEM7-2|SUPT20H;;ENSG00000102710|ENST00000350612|SUPT20H 2.2249882221221924 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6709 34.124 800.0 165980.0 25 0 13323.0 + -1 KIIDIQEKV 9 148 543.3007225415399 542.2934460749399 1 543.3012573122978 MULTI CID FTMS 0 0 0 6705 90214.3359375 0.7502425673428925 -1 0.04437255859375 4 ENSG00000047410|ENST00000367478|TPR 6 {M(Oxidation (M))|F}Y 2 -1 14.693 0.0 0.0 2.7094 0.0 0.0 214.15155261966487 0.0 214.15155261966487 0.0 3.356799823392077 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 2.7094 - 95 + 1 1.655 104578.9 0.5 1534 5173 6705 SUDHL4_400M_050219_2,6709 SUDHL4_400M_050219_2,6709, False False KIIDIQEKV 34.123852 543.301257312298 235178.34375 6705.0 ENSG00000047410|ENST00000367478|TPR 4.282622814178467 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6711 34.131 246.0 413290.0 25 0 36280.0 + 14522 IGQIKRIL 8 107 470.8187708974813 939.6229888617628 2 470.8187133669853 MULTI CID FTMS 0 0 0 6710 330926.09375 0.1709276354285834 4 -0.169769287109375 1 Unmodified _IGQIKRIL_ REV__ENSG00000144635|ENST00000273130|DYNC1LI1;REV__ENST00000475193.1_1_3:32587326-32612262:-|nuORF;REV__ENST00000481915.5_1_3:32574447-32611850:-|nuORF 34.10243960390752 0.3329570729325616 6 {I|L}GQ{I|L}KR{I|L}{I|L} 8 -1 + 48.625 0.0 0.0 5.1749 5.1749 88.292 0.0 0.0 0.0 34.54001679170176 10.080543908985804 10.080543908985804 16.364758163676896 0 1.2786596949921218 1.0969100130080565 0.0 0.2887254899964357 {I|L}GQ{I|L}KR{I|L}{I|L};{I|L}GQ{I|L}{I|L}[RK]{I|L};{[VA]|[{I|L}G]}Q{I|L}KR{I|L}{I|L} 5.1749;3.4333;2.6409 +;-;+ + 65 + 1 1.655 85792.8 1.0 1535 5174 6710 SUDHL4_400M_050219_2,6711 SUDHL4_400M_050219_2,6711,IGQIKRIL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6712 34.143 691.0 88567.0 25 0 5647.9 -1 0 82 925.4267117330484 1848.8388705328964 2 925.4291259646416 MULTI CID FTMS 0 0 0 6710 105342.59375 0.4652157049216594 -6 0.1786651611328125 2 6 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 67.495 0.0 0.0 3.6506 3.6506 79.3 0.0 0.0 0.0 3.768411687748099 51.06791285705228 3.768411687748099 9.013902021140495 0 0.5 0.0 0.0 0.8494850021680094 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[SG][YK]EN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[YQ][HV]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QAEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{NN|[MP]|[D{I|L}]|[EV]}[W{I|L}]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]TD[EP]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.6506;3.1631;3.1631;3.1631;3.1631;2.8424;2.5316;2.3944;2.3164;2.3108 -;-;-;-;-;-;-;-;-;- 471 1 1.655 45497.9 1.0 1536 5174 6710 SUDHL4_400M_050219_2,6712 SUDHL4_400M_050219_2,6712, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6713 34.157 800.0 125230.0 25 0 14302.0 + 14800 ILDQKINEV 9 131 536.3057179693155 1070.596883005431 2 536.3060790896416 MULTI CID FTMS 0 0 0 6710 91819.8984375 0.4564598348876392 7 -0.2725257873535156 3 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 23.78978130925829 0.2284941198415988 6 {I|L}{I|L}{M(Oxidation (M))|F}VND 6 6 56.737 0.0 0.0 5.2995 0.0 0.0 0.0 366.2163179986938 366.2163179986938 44.95333646624394 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.2887254899964357 {I|L}{I|L}{M(Oxidation (M))|F}VND 5.2995 - 810 + 1 1.655 80610.9 0.4900000095367431 1537 5174 6710 SUDHL4_400M_050219_2,6713 SUDHL4_400M_050219_2,6713,ILDQKINEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6714 34.162 292.0 216150.0 25 0 20045.0 34241 SLPSPHDVL 9 104 482.7587622776307 0 482.7590209841728 PEAK CID FTMS 0 0 0 6710 95112.5546875 0.3988084431876171 -3 0.0923309326171875 4 Unmodified _SLPSPHDVL_ ENSG00000255690|ENST00000539664|TRIL 15.847184025352805 0.2451986057151378 6 PVT 3 7 13.188 0.0 0.0 1.3687 0.0 0.0 286.12792777333044 377.1815889947876 663.309516768118 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PVT 1.3687 - 179 + 1 1.655 53738.2 1.0 1538 5174 6710 SUDHL4_400M_050219_2,6714 SUDHL4_400M_050219_2,6714,SLPSPHDVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6716 34.17 240.0 284700.0 25 0 33600.0 + 12078 GQFPGHNEF 9 93 516.7302584285678 1031.4459639239356 2 516.7297241091728 MULTI CID FTMS 0 0 0 6715 223114.875 0.5792176053797966 -17 0.3664360046386719 1 Unmodified _GQFPGHNEF_ ENSG00000163171|ENST00000295324|CDC42EP3 32.78568957990786 0.1150597335874693 6 {[QG]|[NA]}{M(Oxidation (M))|F}PGEET 8 3 35.252 0.0 0.0 3.4177 0.0 0.0 0.0 183.0606478326781 183.0606478326781 19.89815479370801 0.0 0.0 0.0 0 0.8807196863200843 0.721246399047171 0.6747425010840047 0.0 {[QG]|[NA]}{M(Oxidation (M))|F}PGEET 3.4177 - 194 + 1 1.655 56585.3 1.0 1539 5175 6715 SUDHL4_400M_050219_2,6716 SUDHL4_400M_050219_2,6716,GQFPGHNEF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6717 34.178 422.0 180050.0 25 0 30277.0 + 20237 LLDEPTNHL 9 107 526.2757969320251 1050.53704093085 2 526.2740356326103 MULTI CID FTMS 0 0 0 6715 159463.765625 0.7298843040718962 4 -0.1789054870605468 2 Unmodified _LLDEPTNHL_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 71.92227651296345 0.0203558744033348 6 {I|L}{I|L}DE[TP]NH{I|L} 9 0 + 79.283 0.0 0.0 7.5469 7.5469 89.954 0.0 0.0 0.0 61.32452082785436 5.254966846952428 5.254966846952428 7.6362616464364095 0 1.274227503252014 2.0 1.1549471895720984 0.6505149978319906 + + {I|L}{I|L}DE[TP]NH{I|L};{I|L}{I|L}D[{I|L}A]DQTY;{I|L}{I|L}DE[TP]GGH{I|L};{I|L}{I|L}D{M(Oxidation (M))|F}{I|L}{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F};{I|L}{I|L}D{M(Oxidation (M))|F}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}S{I|L};{I|L}{I|L}DC{[QD]|[EN]|[WG]|[KD]|[RS]}VV{M(Oxidation (M))|F};{I|L}{I|L}D[WC(Carbamidomethyl (C))]VV{M(Oxidation (M))|F};{I|L}{I|L}[C(Carbamidomethyl (C))R][HC]H{I|L};{I|L}{I|L}D[{I|L}A]{[QN]|[E{I|L}]|[KN]}[HQ];{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WY][VP] 7.5469;6.82;6.0512;5.4828;5.455;4.4117;3.6749;3.5009;3.3433;3.1297 +;-;-;-;-;-;-;-;-;- + 302 + 1 1.655 62968.4 1.0 1540 5175 6715 SUDHL4_400M_050219_2,6717 SUDHL4_400M_050219_2,6717,LLDEPTNHL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6718 34.179 33.0 1974200.0 25 0 231500.0 38656 TTIKAFFPKK 10 73 590.8577144522666 1179.700875971333 2 590.8580200076103 MULTI CID FTMS 0 0 0 6715 1612954.25 1.0 0 0.0 3 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 36.506200033944 0.1944608063770638 6 {[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK 9 4 + 74.632 0.0 0.0 6.3263 6.3263 94.399 0.0 0.0 0.0 54.96584697476848 18.339993556128107 18.339993556128107 65.24858474643892 0 2.2302046884880937 0.0 0.0 0.4247425010840047 {[DS]|[MA]|[CV]|TT}{I|L}KY{I|L}WKK;{[DS]|[MA]|[CV]|TT}{I|L}K[RH][R{I|L}][VG] 6.3263;0.79537 -;- 214 + 1 1.655 53783.0 1.0 1541 5175 6715 SUDHL4_400M_050219_2,6718 SUDHL4_400M_050219_2,6718,TTIKAFFPKK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6719 34.193 800.0 169350.0 25 0 17604.0 + 17203 KLLDVVHPA 9 142 496.2998346138292 990.5851162944584 2 496.3004028201103 MULTI CID FTMS 0 0 0 6715 117013.53125 0.8576260340024059 -1 0.038330078125 4 Unmodified _KLLDVVHPA_ ENSG00000135624|ENST00000258091|CCT7;ENST00000461290.5_1_2:73461506-73471178:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;nc|ENSG00000135624|Q99832-3|CCT7 62.57269311338072 0.0246576765497938 6 K{I|L}{I|L}DVVHAP 9 2 + 65.145 0.0 0.0 6.5764 6.5764 92.315 0.0 0.0 0.0 44.33285423008914 0.5455939378526011 0.5455939378526011 13.941387883238072 0 2.575257498915996 0.0 0.0 0.0 K{I|L}{I|L}DVVHAP;K{I|L}[DV]{I|L}VHAP;[HV]SV{I|L}{I|L}GVAP;[HV]SV{I|L}{I|L}RAP;K[DV]{I|L}{I|L}VHAP;[K{I|L}]{I|L}DVVHAP;K{I|L}{I|L}DV[Y{I|L}]Q;K{I|L}{I|L}DV[Q{I|L}]Y;[VS]HV{I|L}{I|L}GVAP;[VS]HV{I|L}{I|L}RAP 6.5764;5.169;4.2651;4.2134;4.1325;3.9573;3.7453;3.7429;3.6163;3.5646 -;-;-;-;-;-;-;-;-;- 722 + 1 1.655 104713.0 0.5400000214576721 1542 5175 6715 SUDHL4_400M_050219_2,6719 SUDHL4_400M_050219_2,6719,KLLDVVHPA True True KLLDVVHPA 34.192641 496.30040282011 702782.1875 6715.0 nc|ENSG00000135624|Q99832-3|CCT7;;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;;ENSG00000135624|ENST00000258091|CCT7;;ENST00000461290.5_1_2:73461506-73471178:+|nuORF 8.231640179951986 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6721 34.2 245.0 328630.0 25 0 26825.0 -1 0 81 918.41898582269 1834.82341871218 2 918.921435534954 MULTI CID FTMS 0 0 0 6720 449814.0625 0.7766128445728687 3 -0.1484909057617187 1 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}[HV]QDY{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 15 -1 + 54.376 0.0 0.0 2.9635 2.9635 71.121 0.0 0.0 0.0 3.533314521025943 40.38627782877214 3.533314521025943 1.7609125905568137 0 0.8182503180159344 0.0 0.0 1.385151878060192 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}[HV]QDY{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}[HA]RDY{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDY{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDY{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N{M(Oxidation (M))|F}[HA]RDY{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HA]RDY{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QN]|[E{I|L}]|[KN]};[NP]{M(Oxidation (M))|F}N{I|L}[HV]QDY{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{M(Oxidation (M))|F}N{I|L}[HA]RDY{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QDY{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]DY{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.9635;2.8676;2.7028;2.6107;2.6069;2.5147;2.373;2.277;2.2106;2.2106 -;-;-;-;-;-;-;-;-;- 1272 1 1.655 55130.1 1.0 1543 5176 6720 SUDHL4_400M_050219_2,6721 SUDHL4_400M_050219_2,6721, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6722 34.206 347.0 177350.0 25 0 16557.0 + 1046 AGFQVKAY 8 98 442.2375000820177 882.4604472308354 2 442.2374145388603 MULTI CID FTMS 0 0 0 6720 82041.4140625 0.752310309472147 1 -0.0347633361816406 2 Unmodified _AGFQVKAY_ chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA;ENSG00000132185|ENST00000236938|FCRLA;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;nc|ENSG00000132185|Q7L513-10|FCRLA;nc|ENSG00000132185|Q7L513-12|FCRLA;nc|ENSG00000132185|Q7L513-13|FCRLA;nc|ENSG00000132185|Q7L513-2|FCRLA;nc|ENSG00000132185|Q7L513-3|FCRLA;nc|ENSG00000132185|Q7L513-6|FCRLA;nc|ENSG00000132185|Q7L513-8|FCRLA;nc|ENSG00000132185|Q7L513-9|FCRLA 40.44857923139169 0.2267865117615937 6 [AG]{M(Oxidation (M))|F}QVKAY 8 0 + 52.209 0.0 0.0 5.9163 5.9163 88.96 0.0 0.0 0.0 33.674792326174185 14.904630595263413 14.904630595263413 9.262137858390815 0 0.7134679910804405 1.0 0.0 0.5 + + [AG]{M(Oxidation (M))|F}QVKAY;[AG]{M(Oxidation (M))|F}[AG]VKAY 5.9163;4.8667 +;- + 95 + 1 1.655 56112.0 1.0 1544 5176 6720 SUDHL4_400M_050219_2,6722 SUDHL4_400M_050219_2,6722,AGFQVKAY False True AGFQVKAY 34.206037 442.23741453886 425055.65625 6720.0 nc|ENSG00000132185|Q7L513-3|FCRLA;;ENSG00000132185|ENST00000236938|FCRLA;;nc|ENSG00000132185|Q7L513-10|FCRLA;;nc|ENSG00000132185|Q7L513-12|FCRLA;;nc|ENSG00000132185|Q7L513-6|FCRLA;;nc|ENSG00000132185|Q7L513-13|FCRLA;;chr1:161710912-161711934|44|12.82|0.12|6.8|+|ENST00000546024|FCRLA,FCRLA;;nc|ENSG00000132185|Q7L513-2|FCRLA;;nc|ENSG00000132185|Q7L513-8|FCRLA;;nc|ENSG00000132185|Q7L513-9|FCRLA;;ENST00000470841.1_1_1:161680536-161681272:+|nuORF;;chr1:161711474-161713085|44|27.18|0.2|7.06|+|ENST00000349527|FCRLA,FCRLA 5.472880999247233 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6723 34.215 537.0 167780.0 25 0 14000.0 + 31929 RVAQLEQVY 9 98 553.304463828375 1104.59437472355 2 553.3039428591728 MULTI CID FTMS 0 0 0 6720 153103.171875 0.8407470914154519 -1 0.0304145812988281 3 Unmodified _RVAQLEQVY_ ENSG00000100028|ENST00000215829|SNRPD3;nc|ENSG00000286070|P62318-2|SNRPD3 21.53697664764585 0.2571576504437394 6 [AG]T[KP]{I|L}EQVY 10 5 + 58.879 0.0 0.0 5.3304 5.3304 79.427 0.0 0.0 0.0 2.7929889771509053 16.53212513775344 2.7929889771509053 2.7929889771509053 0 1.0 1.5228787452803376 0.1861818737241735 0.0 [AG]T[KP]{I|L}EQVY;{[QV]|[N{I|L}]|[RA]|[KV]}VQ{I|L}EQVY;[AG]VVQ{I|L}EQVY;[QT][KP]{I|L}EQVY;[AG]T[KP]{I|L}E[AG]VY;{[QV]|[N{I|L}]|[RA]|[KV]}V[AG]{I|L}EQVY;{[QV]|[N{I|L}]|[RA]|[KV]}VQ{I|L}E[AG]VY;[AG]VV[AG]{I|L}EQVY;[AG]VVQ{I|L}E[AG]VY;[QT][KP]{I|L}E[AG]VY 5.3304;5.0776;5.0689;4.7937;4.5007;4.2439;4.2439;4.2392;4.2392;3.9601 -;-;-;-;-;-;-;-;-;- 308 1 1.655 77730.0 1.0 1545 5176 6720 SUDHL4_400M_050219_2,6723 SUDHL4_400M_050219_2,6723,RVAQLEQVY False True RVAQLEQVY 34.215487 553.303942859173 1039660.375 6720.0 ENSG00000100028|ENST00000215829|SNRPD3;;nc|ENSG00000286070|P62318-2|SNRPD3 4.94539753595988 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6724 34.227 686.0 117380.0 25 0 13905.0 + 20224 LLDATQHTL 9 119 506.27741718863456 1010.5402814440693 2 506.2782470583916 MULTI CID FTMS 0 0 0 6720 103911.5703125 1.0 0 0.0 4 Unmodified _LLDATQHTL_ ENSG00000072818|ENST00000158762|ACAP1;ENST00000576628.1_1_17:7240053-7245794:+|nuORF 38.17557092003332 0.0854718145212029 6 {I|L}{I|L}DYHGSPG 9 6 59.369 0.0 0.0 5.8749 0.0 0.0 0.0 68.05134760074452 68.05134760074452 46.89441883346362 0.0 0.0 0.0 0 0.805462187404089 2.0 1.1549471895720984 0.0 {I|L}{I|L}DYHGSPG 5.8749 - 399 + 1 1.655 65588.3 1.0 1546 5176 6720 SUDHL4_400M_050219_2,6724 SUDHL4_400M_050219_2,6724,LLDATQHTL True True LLDATQHTL 34.227399 506.278247058392 437063.375 6720.0 ENST00000576628.1_1_17:7240053-7245794:+|nuORF;;ENSG00000072818|ENST00000158762|ACAP1 5.01293142636617 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6726 34.244 800.0 113880.0 25 0 7423.8 + 43537 WWWWIWWQWW 10 104 874.9037657894092 1747.7929786456184 2 875.4066650271416 MULTI CID FTMS 0 0 0 6725 80423.6953125 0.0471397394670207 -26 0.5234413146972656 1 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 [NP]{I|L}N{M(Oxidation (M))|F}AS{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}DV[HC] 16 16 + 63.42 0.0 0.0 3.6286 3.6286 72.489 0.0 0.0 0.0 10.111085952608327 1.7216751192405155 1.7216751192405155 1.7216751192405155 0 0.3054621874040891 0.958607314841775 0.3807196863200844 0.3252574989159953 [NP]{I|L}N{M(Oxidation (M))|F}AS{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}DV[HC];[NP]{I|L}N{M(Oxidation (M))|F}AS{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}AS{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AN{I|L}DV[HC];[NP]{I|L}N{M(Oxidation (M))|F}AS{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}AGG{I|L}DV[HC];[NP]{I|L}N{[WT]|[RM]}HDAN{I|L}DV[HC];[NP]{I|L}N{[TV]|[{I|L}S]}SHDAN{I|L}DV[HC];EEVD{I|L}NADQM{M(Oxidation (M))|F}G[RP]Q;EEVD{I|L}NA{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SAW[RP]Q;[NP]{I|L}N{[WT]|[RM]}HDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}[WQ]SHDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.6286;3.5301;3.1128;3.1128;3.0692;3.0531;3.0501;3.014;2.9706;2.9152 -;-;-;-;-;-;-;-;-;- 4928 1 1.655 64566.7 0.449999988079071 1547 5177 6725 SUDHL4_400M_050219_2,6726 SUDHL4_400M_050219_2,6726,WWWWIWWQWW False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 6727 34.246 85.0 1183900.0 25 0 227750.0 + 14949 ILMEHIHKL 9 104 378.5546239649364 1132.642042495009 3 378.5546142458916 MULTI CID FTMS 0 0 0 6725 445427.40625 0.5601274749184606 -1 0.0347633361816406 2 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 49.52724829834842 0.0414064571532091 6 {I|L}{I|L}MEH{I|L}HK{I|L} 9 0 + 84.963 0.0 0.0 7.5013 7.5013 95.158 0.0 0.0 0.0 60.155297847661686 10.731136571674751 10.731136571674751 17.518572025801546 0 0.6421590589602533 2.0 0.75 0.1989700043360188 + + {I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}M{I|L}{[YC]|[HE]}HK{I|L};{I|L}{I|L}{I|L}M{[YC]|[HE]}HK{I|L};{I|L}{I|L}M{I|L}{M(Oxidation (M))|F}QQK{I|L};{I|L}{I|L}[YV]EQQK{I|L};{I|L}{I|L}{I|L}M{M(Oxidation (M))|F}QQK{I|L};{I|L}{I|L}M{I|L}[RK][C(Carbamidomethyl (C))S]{I|L};{I|L}{I|L}{I|L}M[RK][C(Carbamidomethyl (C))S]{I|L};{I|L}[YV]{I|L}EQQK{I|L} 7.5013;5.9546;5.6212;5.1832;4.7895;4.7619;4.2789;3.9455;1.8008 +;-;-;-;-;-;-;-;- + 818 + 1 1.655 83357.3 1.0 1548 5177 6725 SUDHL4_400M_050219_2,6727 SUDHL4_400M_050219_2,6727,ILMEHIHKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6728 34.252 357.0 222140.0 25 0 19083.0 -1 KLTEMRGIYA 10 113 399.8811186861108 1196.6215266585325 3 399.8811218142509 MULTI CID FTMS 0 0 0 6725 120081.5703125 1.0 0 0.0 3 Oxidation (M) _KLTEM(Oxidation (M))RGIYA_ chr20:50830380-50876486|48|24.4|0.99|4.62|+|ENST00000445038|BCAS4,BCAS4;ENSG00000124243|ENST00000371608|BCAS4;ENST00000485049.1_1_20:49411653-49449308:+|nuORF;nc|ENSG00000124243|Q8TDM0-2|BCAS4;nc|ENSG00000124243|Q8TDM0-3|BCAS4;nc|ENSG00000124243|Q8TDM0|BCAS4 7.0370850670814 0.6940858557465671 6 [VG]{[VA]|[{I|L}G]}[WY]VG{I|L}YA 11 -1 [VG]{[VA]|[{I|L}G]}[WY]VG{I|L} + + 17.691 0.34449 0.036473 1.4784 1.4784 50.03 0.0 0.0 0.0 0.0 4.895320659647169 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [VG]{[VA]|[{I|L}G]}[WY]VG{I|L}YA 1.4784 - 151 + 1 1.655 63391.4 1.0 1549 5177 6725 SUDHL4_400M_050219_2,6728 SUDHL4_400M_050219_2,6728,KLTEMRGIYA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6729 34.266 800.0 185730.0 25 0 22409.0 + 39614 VDNAYQCRSYD 11 127 667.2754358884116 1332.5363188436231 2 667.2757446169853 MULTI CID FTMS 0 0 0 6725 114508.1640625 0.2971168222378031 -4 0.1403312683105468 4 Unmodified _VDNAYQCRSYD_ REV__ENSG00000152990|ENST00000334304|ADGRA3;REV__ENST00000591780.1_1_18:12075195-12075588:-|nuORF;REV__nc|ENSG00000152990|Q8IWK6-2|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-3|ADGRA3;REV__nc|ENSG00000152990|Q8IWK6-4|ADGRA3 15.248480904072842 0.7179608125786238 6 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 89.747 0.0 0.0 6.7351 0.0 0.0 248.0908985822281 0.0 248.0908985822281 0.0 42.2202030047704 0.0 0.0 0 0.5 0.0 1.7174165578762484 1.1989700043360187 DEAQQNA{M(Oxidation (M))|F}Y 6.7351 - 5979 1 1.655 107945.0 0.5299999713897705 1550 5177 6725 SUDHL4_400M_050219_2,6729 SUDHL4_400M_050219_2,6729,VDNAYQCRSYD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6730 34.28 800.0 209990.0 25 0 20032.0 + 14950 ILMEHIHKL 9 137 567.3287103358847 1132.6428677385693 2 567.3287841677666 MULTI CID FTMS 0 0 0 6725 104982.5234375 0.6043743387430843 -1 0.0347633361816406 5 Unmodified _ILMEHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 73.1962812333195 0.0198633909068982 6 {I|L}{I|L}MEH{I|L}H{I|L}K 9 2 + 100.91 0.0 0.0 8.9094 8.9094 84.221 0.0 0.0 0.0 36.47817481888637 0.6192407154188828 0.6192407154188828 0.6192407154188828 0 1.8226825097560424 2.0 1.1237125054200234 0.2396518287104437 {I|L}{I|L}MEH{I|L}H{I|L}K;{I|L}{I|L}MEH{I|L}HK{I|L};{I|L}{I|L}[YV][{M(Oxidation (M))|F}T]H{I|L}K;{I|L}{I|L}[YV][{M(Oxidation (M))|F}T]HK{I|L};{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQ{I|L}K;{I|L}{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}QQK{I|L};{I|L}{I|L}[YV]EQQ{I|L}K;{I|L}{I|L}[YV]EQQK{I|L};{I|L}{I|L}MEHHK{I|L}{I|L};{I|L}{I|L}MMMR{I|L}{I|L}{I|L} 8.9094;8.8547;5.6812;5.6265;5.2269;5.1722;5.1068;5.0522;4.7914;4.7002 -;+;-;-;-;-;-;-;-;- + 3143 + 1 1.655 127950.7 0.5299999713897705 1551 5177 6725 SUDHL4_400M_050219_2,6730 SUDHL4_400M_050219_2,6730,ILMEHIHKL True True ILMEHIHKL 34.279791 567.328784167767 3085625.5625 6725.0 ENSG00000108298|ENST00000225430|RPL19;;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;;ENST00000432746.1_1_7:102781798-102782185:-|nuORF 6.632961273193359 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6731 34.294 800.0 92124.0 25 0 9314.5 + -1 KLTEMRGIYA 10 108 599.3180614360824 1196.6215699389647 2 599.3185302615166 MULTI CID FTMS 0 0 0 6725 91814.8984375 1.0 0 0.0 6 Oxidation (M) _KLTEM(Oxidation (M))RGIYA_ chr20:50830380-50876486|48|24.4|0.99|4.62|+|ENST00000445038|BCAS4,BCAS4;ENST00000485049.1_1_20:49411653-49449308:+|nuORF;nc|ENSG00000124243|Q8TDM0-2|BCAS4;ENSG00000124243|ENST00000371608|BCAS4;nc|ENSG00000124243|Q8TDM0-3|BCAS4;nc|ENSG00000124243|Q8TDM0|BCAS4 18.373094154950223 0.5392593366289069 6 K{I|L}TE 4 -1 37.735 0.0 0.0 3.1535 0.0 0.0 0.0 722.3269137018186 722.3269137018186 17.289784572998173 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 K{I|L}TE 3.1535 + + 94 + 1 1.655 59345.2 0.4900000095367431 1552 5177 6725 SUDHL4_400M_050219_2,6731 SUDHL4_400M_050219_2,6731,KLTEMRGIYA False False KLTEMRGIYA 34.293622 599.318530261517 363069.90625 6725.0 chr20:50830380-50876486|48|24.4|0.99|4.62|+|ENST00000445038|BCAS4,BCAS4;;ENST00000485049.1_1_20:49411653-49449308:+|nuORF;;nc|ENSG00000124243|Q8TDM0-2|BCAS4;;ENSG00000124243|ENST00000371608|BCAS4;;nc|ENSG00000124243|Q8TDM0-3|BCAS4;;nc|ENSG00000124243|Q8TDM0|BCAS4 4.188843806584676 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6733 34.298 15.0 2478000.0 25 0 321120.0 + 38654 TTIKAFFPKK 10 67 394.24112407471966 1179.701542824359 3 394.2411682009697 MULTI CID FTMS 0 0 0 6732 2563365.75 0.3111338969640735 2 -0.0747337341308593 1 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 32.78568957990786 0.2337485590374503 6 TT{I|L}KY{I|L}WKK 9 4 + 87.445 0.0 0.0 7.4125 7.4125 97.205 0.0 0.0 0.0 76.71958169952731 17.230749808046326 17.230749808046326 87.44518152925373 0 0.7614393726401688 1.2218487496163564 0.0 0.4247425010840047 TT{I|L}KY{I|L}WKK 7.4125 - 71 + 1 1.655 37296.4 1.0 1553 5178 6732 SUDHL4_400M_050219_2,6733 SUDHL4_400M_050219_2,6733,TTIKAFFPKK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6734 34.3 21.0 1736100.0 25 0 374150.0 -1 ILMEHIHKL 9 62 383.8863160393483 1148.637118718245 3 383.8864318728447 MULTI CID FTMS 0 0 0 6732 1748026.375 0.2616095923366907 3 -0.1027565002441406 2 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 18.721224879955976 0.3299216912490967 6 {I|L}{I|L}{M(Oxidation (M))|F} 3 -1 43.188 0.0 0.0 3.7599 0.0 0.0 0.0 772.4116586376898 772.4116586376898 29.23516269895728 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F} 3.7599 + + 29 + 1 1.655 32104.9 1.0 1554 5178 6732 SUDHL4_400M_050219_2,6734 SUDHL4_400M_050219_2,6734,ILMEHIHKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6735 34.313 800.0 167280.0 25 0 16701.0 -1 CLEKNCLGCFY 11 117 732.3122927987454 1462.6100326642909 2 732.8101684451103 MULTI CID FTMS 0 0 0 6732 151638.984375 0.084371462750096 -13 0.3938484191894531 3 3 Carbamidomethyl (C) _C(Carbamidomethyl (C))LEKNC(Carbamidomethyl (C))LGC(Carbamidomethyl (C))FY_ ENSG00000268223|ENST00000686077|ARL14EPL 8.155526934196011 0.8366696279279818 6 [AG]NHDEAQAGNA 12 -1 100.36 0.0 0.0 6.862 0.0 0.0 0.0 324.12213395840325 324.12213395840325 71.77175534610296 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.9392404878284264 2.5669015600442577 [AG]NHDEAQAGNA 6.862 - 25403 1 1.655 100496.6 0.6100000143051147 1555 5178 6732 SUDHL4_400M_050219_2,6735 SUDHL4_400M_050219_2,6735,CLEKNCLGCFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6736 34.327 800.0 172620.0 25 0 14461.0 + 25142 MQKEITAL 8 148 467.2569806125565 932.499408291913 2 467.2574645876884 MULTI CID FTMS 0 0 0 6732 99892.640625 0.229970439340792 -3 0.131439208984375 4 Unmodified _MQKEITAL_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;nc|ENSG00000204434|Q9BYX7|POTEKP 36.12702656103203 0.299085846329477 6 [TA][VG]{[MG]|[TS]}{I|L}TA{I|L} 10 6 [TA][VG]{[MG]|[TS]}{I|L} + + 28.21 -1.4273 -0.22679 3.0252 3.0252 51.62 0.0 0.0 0.0 0.0 11.143183959462352 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 [TA][VG]{[MG]|[TS]}{I|L}TA{I|L} 3.0252 - 1015 + 1 1.655 109893.6 0.4600000083446502 1556 5178 6732 SUDHL4_400M_050219_2,6736 SUDHL4_400M_050219_2,6736,MQKEITAL False True MQKEITAL 34.327276 467.257464587688 1229192.0 6732.0 ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000163017|ENST00000345517|ACTG2;;ENSG00000107796|ENST00000224784|ACTA2;;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;ENSG00000159251|ENST00000290378|ACTC1;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENSG00000075624|ENST00000646664|ACTB 3.691853205362956 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6737 34.341 800.0 126780.0 25 0 8650.1 + 31111 RLLPKVQEV 9 128 541.3400757359641 1080.665598538728 2 541.3401367068291 MULTI CID FTMS 0 0 0 6732 89485.0546875 0.7966374698307321 -1 0.0662612915039062 5 Unmodified _RLLPKVQEV_ ENSG00000186193|ENST00000409687|SAPCD2 32.78568957990786 0.1150597335874693 6 {I|L}{I|L}RPKVQ{M(Oxidation (M))|F} 8 4 54.314 0.0 0.0 5.026 0.0 0.0 0.0 96.04527437691402 96.04527437691402 32.90951697605403 0.0 0.0 0.0 0 0.7951140161145328 1.6989700043360187 0.0 0.4247425010840047 {I|L}{I|L}RPKVQ{M(Oxidation (M))|F} 5.026 - 412 1 1.655 83275.7 0.5 1557 5178 6732 SUDHL4_400M_050219_2,6737 SUDHL4_400M_050219_2,6737,RLLPKVQEV True True RLLPKVQEV 34.341107 541.340136706829 646040.9375 6732.0 ENSG00000186193|ENST00000409687|SAPCD2 5.391180197397868 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6739 34.35 328.0 209460.0 25 0 18395.0 + 14934 ILMEHIHKL 9 98 575.3257793259138 1148.6370057186275 2 575.3257934451103 MULTI CID FTMS 0 0 0 6738 190091.8125 0.1415757233725073 4 -0.10845947265625 1 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 70.33199760932243 0.0209706178985989 6 {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L} 9 0 + 98.305 0.0 0.0 8.5584 8.5584 84.486 0.0 0.0 0.0 36.47817481888637 1.096529140335463 1.096529140335463 1.096529140335463 0 2.2856668758921828 2.0 0.7614393726401688 0.2742275032520141 + + {I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}HK{I|L};{I|L}{I|L}{M(Oxidation (M))|F}EH{I|L}H{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}[C(Carbamidomethyl (C))R]K{I|L};{I|L}{I|L}{M(Oxidation (M))|F}S{I|L}[C(Carbamidomethyl (C))R]{I|L}K;{I|L}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}HHK;{I|L}{I|L}{M(Oxidation (M))|F}E{I|L}{I|L}[R{M(Oxidation (M))|F}]V;{I|L}{I|L}{M(Oxidation (M))|F}[RD]{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{I|L}{I|L}[WY][WQ]K{I|L};[{M(Oxidation (M))|F}E][H{I|L}]{I|L}{I|L}HK{I|L};[HK][H{I|L}]E{M(Oxidation (M))|F}{I|L}{I|L}{I|L} 8.5584;8.4629;6.3641;6.2686;4.2863;3.966;3.6721;2.4808;1.9594;1.0569 +;-;-;-;-;-;-;-;-;- + 530 + 1 1.655 55995.7 1.0 1558 5179 6738 SUDHL4_400M_050219_2,6739 SUDHL4_400M_050219_2,6739,ILMEHIHKL True False ILMEHIHKL 34.349636 575.32579344511 74880750.0 6738.0 ENSG00000108298|ENST00000225430|RPL19;;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;;ENST00000432746.1_1_7:102781798-102782185:-|nuORF 7.195241610209147 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6740 34.352 119.0 594020.0 25 0 57030.0 + 34480 SMLEDVQRA 9 86 532.7554861287224 1063.4964193242447 2 532.7559081912041 MULTI CID FTMS 0 0 0 6738 400597.28125 0.2654294987863939 -4 0.1789054870605468 2 Oxidation (M) _SM(Oxidation (M))LEDVQRA_ ENSG00000106344|ENST00000223073|RBM28 45.69961567697781 0.0497987121815769 6 QVDE{I|L}{[ES]|[DT]|[{I|L}C]} 7 8 52.237 0.0 0.0 4.9118 0.0 0.0 245.1488972394547 0.0 245.1488972394547 0.0 40.95516025450024 0.0 0.0 0 0.9247425010840048 0.0 0.8494850021680094 0.3252574989159953 QVDE{I|L}{[ES]|[DT]|[{I|L}C]} 4.9118 - 194 1 1.655 57710.4 1.0 1559 5179 6738 SUDHL4_400M_050219_2,6740 SUDHL4_400M_050219_2,6740,SMLEDVQRA True False SMLEDVQRA 34.352126 532.755908191204 5969995.0 6738.0 ENSG00000106344|ENST00000223073|RBM28 8.16045077641805 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6741 34.359 384.0 216390.0 25 0 20200.0 37828 TLTKHKIIHTD 11 115 436.2556802415231 1305.7452113247691 3 436.2555114626884 MULTI CID FTMS 0 0 0 6738 196983.328125 0.9460266668827824 -1 0.0474662780761718 3 Unmodified _TLTKHKIIHTD_ ENSG00000196268|ENST00000392288|ZNF493;nc|ENSG00000196268|Q6ZR52|ZNF493 15.538449434065043 0.7119291465483839 6 TT{I|L}KK[C(Carbamidomethyl (C))R][SG]KK 11 9 + 69.755 0.0 0.0 5.3422 5.3422 77.728 0.0 0.0 0.0 25.22878745280337 1.5123110778156672 1.5123110778156672 1.5123110778156672 0 0.3054621874040891 1.5228787452803376 1.1861818737241734 1.1989700043360187 TT{I|L}KK[C(Carbamidomethyl (C))R][SG]KK;TT{I|L}KK[C(Carbamidomethyl (C))R][{I|L}T]SV;TT{I|L}KY{I|L}[PA][{I|L}T]SV;TT{I|L}KK[R{M(Oxidation (M))|F}][KT][PS];[K{I|L}]{[QS]|[NT]}{[YD]|[{M(Oxidation (M))|F}M]}KK{I|L}[PS];[K{I|L}]YR[RH]H{I|L}[PS] 5.3422;5.2264;5.1735;4.3253;2.1941;1.095 -;-;-;-;-;- 348 + 1 1.655 73302.3 1.0 1560 5179 6738 SUDHL4_400M_050219_2,6741 SUDHL4_400M_050219_2,6741,TLTKHKIIHTD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6742 34.368 534.0 227820.0 25 0 19598.0 + -1 MQKEITAL 8 139 475.2545564765516 948.4945600199032 2 475.2539245486259 MULTI CID FTMS 0 0 0 6738 138294.640625 0.2103310751587263 -5 0.2172355651855468 4 Oxidation (M) _M(Oxidation (M))QKEITAL_ ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000107796|ENST00000224784|ACTA2;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000159251|ENST00000290378|ACTC1;nc|ENSG00000204434|Q9BYX7|POTEKP;ENSG00000143632|ENST00000366684|ACTA1;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB 30.63653989081413 0.3996269429323407 6 {I|L}TA{I|L} 4 -1 36.402 0.0 0.0 3.8379 0.0 0.0 532.2308827130875 0.0 532.2308827130875 0.0 20.4414534154732 0.0 0.0 0 0.9247425010840048 0.0 0.4247425010840047 0.0 {I|L}TA{I|L} 3.8379 + + 344 1 1.655 98375.7 1.0 1561 5179 6738 SUDHL4_400M_050219_2,6742 SUDHL4_400M_050219_2,6742,MQKEITAL False False MQKEITAL 34.368384 475.253924548626 2546879.25 6738.0 ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000163017|ENST00000345517|ACTG2;;ENSG00000107796|ENST00000224784|ACTA2;;ENST00000507366.1_1_5:79595499-79595778:-|nuORF;;ENST00000397487.3_1_2:132383579-132384836:+|nuORF;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;;ENST00000423783.1_1_17:17146010-17146160:+|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;ENSG00000159251|ENST00000290378|ACTC1;;nc|ENSG00000204434|Q9BYX7|POTEKP;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENSG00000075624|ENST00000646664|ACTB 4.865869204203288 2.0 True 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6744 34.378 384.0 230710.0 25 0 16518.0 + 34479 SMLEDVQRA 9 111 524.7583469677577 1047.5021410023153 2 524.7584106326103 MULTI CID FTMS 0 0 0 6743 153998.265625 0.8833965294028437 -1 0.0272674560546875 1 Unmodified _SMLEDVQRA_ ENSG00000106344|ENST00000223073|RBM28 45.69961567697781 0.0497987121815769 6 {[MS]|[{M(Oxidation (M))|F}A]}{I|L}EDVQ{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 70.467 0.0 0.0 6.7272 6.7272 90.231 0.0 0.0 0.0 46.03031650958563 2.922152515121226 2.922152515121226 9.208187539523747 0 0.9247425010840048 2.0 0.4247425010840047 0.6549471895720984 + + {[MS]|[{M(Oxidation (M))|F}A]}{I|L}EDVQ{[QV]|[N{I|L}]|[RA]|[KV]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EDV[AG]{[QV]|[N{I|L}]|[RA]|[KV]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}E[KQ]{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EA[KG]{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}A[WQ]{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}EA[RD]{[QV]|[N{I|L}]|[RA]|[KV]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}AE[KG]{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}[WQ]{I|L}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{I|L}AE[RD]{[QV]|[N{I|L}]|[RA]|[KV]};{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}E[KG]{I|L}{[CP]|[EA]} 6.7272;5.8481;4.8149;4.5275;4.5275;4.2673;4.2401;4.0246;3.9799;3.7372 +;-;-;-;-;-;-;-;-;- + 403 + 1 1.655 72043.2 1.0 1562 5180 6743 SUDHL4_400M_050219_2,6744 SUDHL4_400M_050219_2,6744,SMLEDVQRA True True SMLEDVQRA 34.377832 524.75841063261 452613.28125 6743.0 ENSG00000106344|ENST00000223073|RBM28 7.131857395172119 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6745 34.388 555.0 181430.0 25 0 14202.0 + 18424 KVYDPVSEY 9 137 550.2686702215697 1098.5227875099392 2 550.2686035037041 MULTI CID FTMS 0 0 0 6743 121932.3125 0.4424831368422007 -4 0.1757583618164062 2 Unmodified _KVYDPVSEY_ ENSG00000063601|ENST00000445323|MTMR1;nc|ENSG00000063601|Q13613-2|MTMR1;nc|ENSG00000063601|Q13613|MTMR1 61.60191391372663 0.0251951588191061 6 {[QV]|[N{I|L}]|[RA]|[KV]}YDPVSEY 9 0 + 69.102 0.0 0.0 6.2904 6.2904 85.365 0.0 0.0 0.0 0.9953981083011314 54.77893911046438 0.9953981083011314 5.51306453274195 0 1.4731975075880328 0.0 1.2059771852360797 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}YDPVSEY;[VP]D{[HG]|PP}PVSEY;[VP]DYKVSEY;[VP]SY[VG]VSEY;[Q{I|L}][YT]PVSEY;[VP]SYRWEY;[{M(Oxidation (M))|F}V]{NN|[MP]|[D{I|L}]|[EV]}KVSEY;[VS]PY[VG]VSEY;[VP]SY{I|L}AASEY;{[VA]|[{I|L}G]}A[YT]PVSEY 6.2904;5.7885;5.4825;4.8719;4.7556;4.4376;4.2853;4.1417;4.0498;3.9335 +;-;-;-;-;-;-;-;-;- + 792 1 1.655 84631.1 1.0 1563 5180 6743 SUDHL4_400M_050219_2,6745 SUDHL4_400M_050219_2,6745,KVYDPVSEY True True KVYDPVSEY 34.387576 550.268603503704 1751301.0 6743.0 ENSG00000063601|ENST00000445323|MTMR1;;nc|ENSG00000063601|Q13613-2|MTMR1;;nc|ENSG00000063601|Q13613|MTMR1 6.966202576955159 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6746 34.396 500.0 160260.0 25 0 17754.0 + 1661 ALNGHVEMV 9 117 493.2418682186839 984.469183504168 2 493.2421447634697 MULTI CID FTMS 0 0 0 6743 102883.1875 0.3729223298133566 -3 0.1409950256347656 3 Oxidation (M) _ALNGHVEM(Oxidation (M))V_ ENSG00000065413|ENST00000282272|ANKRD44;nc|ENSG00000065413|Q8N8A2-2|ANKRD44;nc|ENSG00000065413|Q8N8A2-3|ANKRD44;nc|ENSG00000065413|Q8N8A2-4|ANKRD44;nc|ENSG00000065413|Q8N8A2-5|ANKRD44 41.8396318013385 0.0653578398400075 6 [{I|L}A]N{[HG]|PP}VE{M(Oxidation (M))|F}V 9 0 + 46.479 0.0 0.0 4.7212 4.7212 83.835 0.0 0.0 0.0 5.836134377877329 5.836134377877329 5.836134377877329 9.208187539523747 0 1.7658715643802765 2.0 0.0 0.0 + + [{I|L}A]N{[HG]|PP}VE{M(Oxidation (M))|F}V;[{I|L}A]GG{[HG]|PP}VE{M(Oxidation (M))|F}V;[H{I|L}]NQVE{M(Oxidation (M))|F}V;[{I|L}A]N{[HG]|PP}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MV;{[QV]|[N{I|L}]|[RA]|[KV]}HQVE{M(Oxidation (M))|F}V;{[QV]|[N{I|L}]|[RA]|[KV]}A{[HG]|PP}VE{M(Oxidation (M))|F}V;[{I|L}A]N[HS][TP]{M(Oxidation (M))|F}V;[{I|L}A]N[HS][DV]MV;[{I|L}A][YT]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}N;{[QV]|[N{I|L}]|[RA]|[KV]}HQ{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}MV 4.7212;3.7859;3.4033;2.9967;2.5869;2.3391;1.9983;1.8727;1.6283;0.86238 +;-;-;-;-;-;-;-;-;- + 477 1 1.655 63912.7 1.0 1564 5180 6743 SUDHL4_400M_050219_2,6746 SUDHL4_400M_050219_2,6746,ALNGHVEMV True False ALNGHVEMV 34.396409 493.24214476347 1139552.375 6743.0 nc|ENSG00000065413|Q8N8A2-5|ANKRD44;;nc|ENSG00000065413|Q8N8A2-3|ANKRD44;;nc|ENSG00000065413|Q8N8A2-2|ANKRD44;;ENSG00000065413|ENST00000282272|ANKRD44;;nc|ENSG00000065413|Q8N8A2-4|ANKRD44 7.640190442403157 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6748 34.405 256.0 168840.0 25 0 13472.0 -1 0 54 925.4267117330484 1848.8388705328964 2 925.4288207888604 MULTI CID FTMS 0 0 0 6747 219813.6875 0.970744842531864 1 -0.0224990844726562 1 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L} 5 -1 31.075 0.0 0.0 1.6808 0.0 0.0 0.0 1260.5600979101027 1260.5600979101027 20.89755485660417 0.0 0.0 0.0 0 1.5 0.0 0.0 0.2887254899964357 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L} 1.6808 - 166 1 1.655 36649.5 1.0 1565 5181 6747 SUDHL4_400M_050219_2,6748 SUDHL4_400M_050219_2,6748, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6749 34.419 800.0 114270.0 25 0 17138.0 + 14801 ILDQKINEV 9 116 536.305916187746 0 536.3060790896416 PEAK CID FTMS 0 0 0 6747 86266.84375 0.7759800668280727 3 -0.0627670288085937 2 Unmodified _ILDQKINEV_ ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF 26.268140514670165 0.1442484609216422 6 {I|L}[C(Carbamidomethyl (C))S]{I|L}{I|L}DQ 7 7 27.133 0.0 0.0 2.5344 0.0 0.0 113.0857570807669 125.07222925357657 238.15798633434343 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.6643943297944485 1.0 {I|L}[C(Carbamidomethyl (C))S]{I|L}{I|L}DQ 2.5344 - 67 + 1 1.655 77721.9 0.550000011920929 1566 5181 6747 SUDHL4_400M_050219_2,6749 SUDHL4_400M_050219_2,6749,ILDQKINEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6751 34.425 154.0 319380.0 25 0 24502.0 + 23212 LSSPVTKSF 9 83 483.2686621050034 964.5227712768068 2 483.2693359255791 MULTI CID FTMS 0 0 0 6750 178098.71875 0.3675116748927272 4 -0.0812187194824218 1 Unmodified _LSSPVTKSF_ nc|ENSG00000211592|P01834|IGKC 29.84058131909904 0.1515068451768857 6 {[WT]|[RM]}PVTKS{M(Oxidation (M))|F} 8 3 + 46.217 0.0 0.0 4.7917 4.7917 85.473 0.0 0.0 0.0 27.63351715666065 7.439787320815903 7.439787320815903 10.09759837289156 0 0.8494850021680094 0.0 0.0 0.0 {[WT]|[RM]}PVTKS{M(Oxidation (M))|F};{[WT]|[RM]}PV[KS]T{M(Oxidation (M))|F};[DV]{[VA]|[{I|L}G]}VTKS{M(Oxidation (M))|F};[DV]{[VA]|[{I|L}G]}V[KS]T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}PSK{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}PKS{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[TV]|[{I|L}S]};[HK][YR]KS{M(Oxidation (M))|F};[VG]{NN|[MP]|[D{I|L}]|[EV]}P[HK]{[TV]|[{I|L}S]};[PS]{I|L}SK{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[TV]|[{I|L}S]};[VP]TSK{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[TV]|[{I|L}S]} 4.7917;3.7448;3.5193;2.4724;2.4007;2.1944;1.6396;1.327;1.1992;1.0697 -;-;-;-;-;-;-;-;-;- 400 + 1 1.655 46802.6 1.0 1567 5182 6750 SUDHL4_400M_050219_2,6751 SUDHL4_400M_050219_2,6751,LSSPVTKSF False False LSSPVTKSF 34.424513 483.269335925579 2526642.5 6750.0 nc|ENSG00000211592|P01834|IGKC 3.8053269386291504 2.0 True 9.0 True nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 6752 34.43 274.0 183350.0 25 0 16239.0 + 2997 AVIKIQSSY 9 93 504.78949403331154 1007.5644351334232 2 504.7900573611259 MULTI CID FTMS 0 0 0 6750 164364.140625 1.0 0 0.0 2 Unmodified _AVIKIQSSY_ ENSG00000066279|ENST00000367409|ASPM 29.081581746732265 0.1611639662936252 6 {[VA]|[{I|L}G]}{I|L}C 4 6 38.188 0.0 0.0 3.7901 0.0 0.0 0.0 618.3274019830686 618.3274019830686 12.697953115119065 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}C 3.7901 - 105 + 1 1.655 42993.6 1.0 1568 5182 6750 SUDHL4_400M_050219_2,6752 SUDHL4_400M_050219_2,6752,AVIKIQSSY False True AVIKIQSSY 34.429558 504.790057361126 689107.375 6750.0 ENSG00000066279|ENST00000367409|ASPM 6.023402055104573 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6753 34.439 535.0 177030.0 25 0 15243.0 -1 RMNCFIWEWQ 10 90 743.3235868052608 1484.6326206773217 2 743.3234741091728 MULTI CID FTMS 0 0 0 6750 137479.53125 0.7081018347316269 -2 0.0505218505859375 3 Carbamidomethyl (C),Oxidation (M) _RM(Oxidation (M))NC(Carbamidomethyl (C))FIWEWQ_ ENST00000409911.5_2_2:77749247-77749343:-|nuORF 3.2813086475875832 0.7114585191678878 6 {[QG]|[NA]}GAMAEAQQNA{M(Oxidation (M))|F}Y 14 -1 + 74.109 0.0 0.0 4.9917 4.9917 77.006 0.0 0.0 0.0 4.480844613864633 56.27314294656318 4.480844613864633 1.896640662449542 0 1.0924778212679485 0.958607314841775 0.0 1.1237125054200234 {[QG]|[NA]}GAMAEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QMAEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}G{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAMAEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAMAEAQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAMAEA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AMAEAQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QMAEA[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QMAEAQQGGA{M(Oxidation (M))|F}Y;{[QG]|[NA]}QMAEAQ[AG]NA{M(Oxidation (M))|F}Y 4.9917;4.864;4.5787;4.3822;4.3822;4.3822;4.3025;4.2529;4.2529;4.2529 -;-;-;-;-;-;-;-;-;- 1005 1 1.655 73235.7 1.0 1569 5182 6750 SUDHL4_400M_050219_2,6753 SUDHL4_400M_050219_2,6753,RMNCFIWEWQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6754 34.445 357.0 179180.0 25 0 29446.0 + -1 KQVMEGRVTF 10 85 404.2130239718605 1209.6172425157815 3 404.2131530642509 MULTI CID FTMS 0 0 0 6750 99944.828125 0.8531616518084574 -1 0.0224990844726562 4 Oxidation (M) _KQVM(Oxidation (M))EGRVTF_ ENSG00000103365|ENST00000309859|GGA2 20.871137199558856 0.4973446006067743 6 RHEG[RV]T{M(Oxidation (M))|F} 8 -1 32.384 0.0 0.0 2.6772 0.0 0.0 209.1036907869272 0.0 209.1036907869272 0.0 22.10592621463596 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 RHEG[RV]T{M(Oxidation (M))|F} 2.6772 - 75 + 1 1.655 54114.7 1.0 1570 5182 6750 SUDHL4_400M_050219_2,6754 SUDHL4_400M_050219_2,6754,KQVMEGRVTF False False KQVMEGRVTF 34.445417 404.213153064251 589705.1875 6750.0 ENSG00000103365|ENST00000309859|GGA2 5.799612840016683 3.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6755 34.45 221.0 247920.0 25 0 31712.0 + 15035 ILTNDRTGL 9 90 501.7822776313919 1001.5500023295838 2 502.2827331423759 MULTI CID FTMS 0 0 0 6750 126280.9296875 0.0626401229467055 18 -0.4906578063964844 5 Unmodified _ILTNDRTGL_ REV__ENSG00000197043|ENST00000354546|ANXA6;REV__nc|ENSG00000197043|P08133-2|ANXA6 9.347437153973935 0.588369872918737 6 {I|L} 1 -1 12.764 0.0 0.0 1.2744 0.0 0.0 870.4551974973557 0.0 870.4551974973557 0.0 -0.3347339481530653 -0.3347339481530653 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2744 + + 54 + 1 1.655 47295.2 1.0 1571 5182 6750 SUDHL4_400M_050219_2,6755 SUDHL4_400M_050219_2,6755,ILTNDRTGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6757 34.455 164.0 375930.0 25 0 44284.0 + 12079 GQFPGHNEF 9 90 516.7302584285678 1031.4459639239356 2 516.7300292849541 MULTI CID FTMS 0 0 0 6756 302326.59375 0.7848552709652621 -9 0.3256950378417969 1 Unmodified _GQFPGHNEF_ ENSG00000163171|ENST00000295324|CDC42EP3 26.268140514670165 0.1969607489560049 6 {[QG]|[NA]}{M(Oxidation (M))|F}PG{M(Oxidation (M))|F} 6 3 36.151 0.0 0.0 3.5049 0.0 0.0 0.0 395.1395662897094 395.1395662897094 22.07901774153892 0.0 0.0 0.0 0 0.8807196863200843 0.7958800173440752 0.0 0.0 {[QG]|[NA]}{M(Oxidation (M))|F}PG{M(Oxidation (M))|F} 3.5049 - 240 + 1 1.655 53737.4 1.0 1572 5183 6756 SUDHL4_400M_050219_2,6757 SUDHL4_400M_050219_2,6757,GQFPGHNEF False True GQFPGHNEF 34.455364 516.730029284954 34992207.0 6756.0 ENSG00000163171|ENST00000295324|CDC42EP3 8.246778806050619 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6758 34.459 198.0 329470.0 25 0 44880.0 -1 0 90 918.41898582269 1834.82341871218 2 918.4211913943292 MULTI CID FTMS 0 0 0 6756 139498.78125 0.2297411231351126 10 -0.2802772521972656 2 6 EDQVAV{M(Oxidation (M))|F}[YG]{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 14 -1 58.687 0.0 0.0 3.1985 0.0 0.0 241.14332778144689 0.0 241.14332778144689 0.0 30.57453666319532 0.0 0.0 0 0.8252574989159953 0.0 1.1549471895720984 1.4049471895720984 EDQVAV{M(Oxidation (M))|F}[YG]{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.1985 - 2385 1 1.655 46027.4 1.0 1573 5183 6756 SUDHL4_400M_050219_2,6758 SUDHL4_400M_050219_2,6758, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6760 34.465 192.0 337540.0 25 0 45372.0 + 11649 GLATDVQTV 9 89 452.2428486776828 902.4711444221656 2 452.2427856326103 MULTI CID FTMS 0 0 0 6759 308969.21875 0.0746774831906051 -7 0.2317848205566406 1 Unmodified _GLATDVQTV_ ENSG00000277791|ENST00000619426|PSMB3 67.34385681178166 0.0221257235307089 6 {[VA]|[{I|L}G]}GTE 5 6 37.99 0.0 0.0 4.2095 0.0 0.0 0.0 442.23119015874687 442.23119015874687 12.135242990424471 0.0 0.0 0.0 0 0.0 2.0 0.6307196863200843 0.0 {[VA]|[{I|L}G]}GTE 4.2095 - 537 1 1.655 55300.9 1.0 1574 5184 6759 SUDHL4_400M_050219_2,6760 SUDHL4_400M_050219_2,6760,GLATDVQTV True True GLATDVQTV 34.465404 452.24278563261 37722708.0 6759.0 ENSG00000277791|ENST00000619426|PSMB3 4.81594451268514 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6761 34.472 371.0 262450.0 25 0 18025.0 + 24096 LYIMKLNV 8 124 497.29571385303257 992.5768747728652 2 497.2964965701103 MULTI CID FTMS 0 0 0 6759 276287.25 0.3713036435179418 -4 0.090789794921875 2 Unmodified _LYIMKLNV_ REV__ENST00000287912.7_1_7:155437535-155471332:+|nuORF 34.18733598223924 0.3315367612694167 6 {[QV]|[N{I|L}]|[RA]|[KV]}HRK{I|L}D 7 -1 35.124 0.0 0.0 3.5387 0.0 0.0 0.0 113.07242694489494 113.07242694489494 19.55101553145913 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.0 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}HRK{I|L}D 3.5387 - 586 1 1.655 79080.1 1.0 1575 5184 6759 SUDHL4_400M_050219_2,6761 SUDHL4_400M_050219_2,6761,LYIMKLNV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6762 34.479 395.0 154590.0 25 0 12213.0 + 29201 QGIGKLASV 9 99 436.7636983455071 871.5128437578143 2 436.7638427615166 MULTI CID FTMS 0 0 0 6759 156128.515625 1.0 0 0.0 3 Unmodified _QGIGKLASV_ ENSG00000177600|ENST00000321153|RPLP2;ENST00000525722.1_1_11:811587-812833:+|nuORF;ENST00000526222.5_1_11:810419-812833:+|nuORF;ENST00000532004.5_1_11:810000-812833:+|nuORF 39.94969957227396 0.0757326808254658 6 GRRSV 5 6 25.546 0.0 0.0 2.9312 0.0 0.0 298.1653463296704 0.0 298.1653463296704 0.0 15.631385436902807 0.0 0.0 0 1.1505149978319906 0.0 0.2614393726401688 0.0 GRRSV 2.9312 - 144 + 1 1.655 53724.9 1.0 1576 5184 6759 SUDHL4_400M_050219_2,6762 SUDHL4_400M_050219_2,6762,QGIGKLASV True True QGIGKLASV 34.479135 436.763842761517 788768.375 6759.0 ENST00000525722.1_1_11:811587-812833:+|nuORF;;ENSG00000177600|ENST00000321153|RPLP2;;ENST00000526222.5_1_11:810419-812833:+|nuORF;;ENST00000532004.5_1_11:810000-812833:+|nuORF 4.072203159332275 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6763 34.485 318.0 293740.0 25 0 79601.0 + 20713 LLSAEPVPA 9 109 448.75814221499 895.50173149678 2 448.7581054568291 MULTI CID FTMS 0 0 0 6759 133174.421875 0.009074896371627 -7 0.2317848205566406 4 Unmodified _LLSAEPVPA_ ENSG00000007312|ENST00000006750|CD79B;ENST00000558969.1_1_17:62008689-62009627:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B 30.22481116460888 0.1466181017706357 6 {[SA]|[TG]}E{I|L}{I|L}P 6 5 19.687 0.0 0.0 2.1984 0.0 0.0 0.0 282.1520970575801 282.1520970575801 -1.6616049388903136 0.0 -1.6616049388903136 0.0 0 0.0 0.0 0.8338395061109687 0.0 {[SA]|[TG]}E{I|L}{I|L}P 2.1984 - 243 1 1.655 77041.6 1.0 1577 5184 6759 SUDHL4_400M_050219_2,6763 SUDHL4_400M_050219_2,6763,LLSAEPVPA False True LLSAEPVPA 34.484917 448.758105456829 70658808.0 6759.0 ENSG00000007312|ENST00000006750|CD79B;;nc|ENSG00000007312|P40259-2|CD79B;;ENST00000558969.1_1_17:62008689-62009627:-|nuORF 4.381420135498047 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6765 34.492 157.0 335860.0 25 0 33902.0 10011 FPLMLDLAP 9 74 508.77988973047206 1015.545226527744 2 508.7795593142509 MULTI CID FTMS 0 0 0 6764 412368.03125 0.8366066746059843 15 -0.4246559143066406 1 Unmodified _FPLMLDLAP_ ENSG00000123552|ENST00000500704|USP45;nc|ENSG00000123552|Q70EL2-3|USP45 30.22481116460888 0.1466181017706357 6 TPE 3 8 38.5 0.0 0.0 3.7911 0.0 0.0 670.3760867626349 0.0 670.3760867626349 0.0 16.817496819840656 0.0 0.0 0 0.4247425010840047 0.0 0.805462187404089 0.0 TPE 3.7911 - 51 1 1.655 50852.7 1.0 1578 5185 6764 SUDHL4_400M_050219_2,6765 SUDHL4_400M_050219_2,6765,FPLMLDLAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6766 34.5 465.0 170580.0 25 0 10734.0 43538 WWWWIWWQWW 10 81 874.9037657894092 1747.7929786456184 2 874.9114868044853 MULTI CID FTMS 0 0 0 6764 240794.625 0.1424370936239418 -18 0.5436630249023438 2 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NADEK[WC(Carbamidomethyl (C))]{I|L}Q 14 12 + 61.621 0.0 0.0 3.5256 3.5256 77.463 0.0 0.0 0.0 9.018637558036673 12.302819856851386 9.018637558036673 6.667853209646175 0 0.7742275032520141 0.0 0.6747425010840047 0.75 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NADEK[WC(Carbamidomethyl (C))]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NWEK[WC(Carbamidomethyl (C))]{I|L}Q;{[{M(Oxidation (M))|F}D]|MM}[{I|L}P]{I|L}NADEK[WC(Carbamidomethyl (C))]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}WNEK[WC(Carbamidomethyl (C))]{I|L}Q;{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NADEK[WC(Carbamidomethyl (C))]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}WDQK[WC(Carbamidomethyl (C))]{I|L}Q;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[NV]|[RG]}{I|L}NADEK[WC(Carbamidomethyl (C))]{I|L}Q;{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}NWEK[WC(Carbamidomethyl (C))]{I|L}Q;{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}WNEK[WC(Carbamidomethyl (C))]{I|L}Q;{[YD]|[{M(Oxidation (M))|F}M]}{[HG]|PP}{I|L}WDQK[WC(Carbamidomethyl (C))]{I|L}Q 3.5256;3.1441;3.0096;2.9719;2.9243;2.7997;2.7521;2.5428;2.3706;2.1983 -;-;-;-;-;-;-;-;-;- 1307 + 1 1.655 63369.8 1.0 1579 5185 6764 SUDHL4_400M_050219_2,6766 SUDHL4_400M_050219_2,6766,WWWWIWWQWW False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 6768 34.506 192.0 326380.0 25 0 36584.0 + + 44105 RLAPEIVSA 9 72 478.28219730819455 954.5498416831892 2 478.2816955447197 MULTI CID FTMS 0 0 0 6767 340178.9375 0.4883784011256943 -2 0.0409507751464843 1 Unmodified _YKKFIVAS_ ENSG00000275342|ENST00000615670|PRAG1 23.1484247019978 0.5573009939494978 6 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[YK]VSA 8 -1 + 32.911 0.0 0.0 3.4478 3.4478 84.486 0.0 0.0 0.0 10.208122007288624 9.23902187720806 9.23902187720806 32.911159568492465 0 0.4247425010840047 0.0 0.7059771852360797 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}[YK]VSA 3.4478 - 84 + 1 1.655 54308.1 1.0 1580 5186 6767 SUDHL4_400M_050219_2,6768 SUDHL4_400M_050219_2,6768,YKKFIVAS False False RLAPEIVSA 34.506352 478.28169554472 4006304.5 6767.0 ENSG00000275342|ENST00000615670|PRAG1 5.171286980311076 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6769 34.51 164.0 385970.0 25 0 46250.0 + 11669 GLDSGFHSV 9 78 459.7195995997038 917.4246462662076 2 459.7193176150322 MULTI CID FTMS 0 0 0 6767 93845.8671875 0.6422561545486236 -2 0.0409507751464843 2 Unmodified _GLDSGFHSV_ ENSG00000077454|ENST00000310300|LRCH4;ENST00000467201.5_1_7:100174858-100176198:-|nuORF 21.74664581756881 0.2544899275067181 6 {[VA]|[{I|L}G]}D[YR]S[HA] 8 5 + 32.101 0.0 0.0 3.499 3.499 81.137 0.0 0.0 0.0 0.3617532050066074 21.131674952134105 0.3617532050066074 9.262137858390812 0 0.9247425010840048 1.6989700043360187 0.0 0.0 {[VA]|[{I|L}G]}D[YR]S[HA];{[VA]|[{I|L}G]}D{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[TA][HA];{[VA]|[{I|L}G]}{NN|[MP]|[D{I|L}]|[EV]}[W{M(Oxidation (M))|F}][PA];[VS][W{M(Oxidation (M))|F}][TA][HA] 3.499;2.4894;1.9565;0.099752 -;-;-;- 147 1 1.655 52124.0 1.0 1581 5186 6767 SUDHL4_400M_050219_2,6769 SUDHL4_400M_050219_2,6769,GLDSGFHSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6770 34.513 161.0 421430.0 25 0 53419.0 14666 IIPGGIYDA 9 83 459.7491399470667 917.4837269609334 2 459.7489196658134 MULTI CID FTMS 0 0 0 6767 168725.4375 0.0303680973727636 -8 0.2064743041992187 3 Unmodified _IIPGGIYDA_ ENSG00000101441|ENST00000217423|CST4 16.942295170755138 0.3780752226737986 6 {I|L}{I|L} 2 7 41.766 0.0 0.0 4.5522 0.0 0.0 0.0 688.2919104459227 688.2919104459227 21.520315121734228 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 + {I|L}{I|L} 4.5522 + + 85 + 1 1.655 56763.9 1.0 1582 5186 6767 SUDHL4_400M_050219_2,6770 SUDHL4_400M_050219_2,6770,IIPGGIYDA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6771 34.522 499.0 181350.0 25 0 10044.0 36116 SVSMMVLVTG 10 121 512.2664339565858 1022.5183149799716 2 512.2652465701103 MULTI CID FTMS 0 0 0 6767 140629.015625 0.3737453622639419 -4 0.0812187194824218 4 Unmodified _SVSMMVLVTG_ ENST00000412485.1_1_X:13285365-13285440:-|nuORF 13.042465956692816 0.6287021003332052 6 NTGV 4 9 26.197 0.0 0.0 2.562 0.0 0.0 633.3215204016499 0.0 633.3215204016499 0.0 8.317338212939273 0.0 0.0 0 0.4247425010840047 0.0 0.2396518287104437 0.0 NTGV 2.562 - 458 + 1 1.655 73471.3 1.0 1583 5186 6767 SUDHL4_400M_050219_2,6771 SUDHL4_400M_050219_2,6771,SVSMMVLVTG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6773 34.538 800.0 118990.0 25 0 14777.0 + 362 AECYMNHRFY 10 103 667.2754358884116 1332.5363188436231 2 667.2750121951103 MULTI CID FTMS 0 0 0 6772 79451.421875 0.206154331291963 6 -0.2084808349609375 1 Unmodified _AECYMNHRFY_ REV__ENSG00000148985|ENST00000278243|PGAP2;REV__ENST00000490830.5_1_11:3845682-3846685:+|nuORF;REV__nc|ENSG00000148985|Q9UHJ9-3|PGAP2;REV__nc|ENSG00000148985|Q9UHJ9-5|PGAP2;REV__nc|ENSG00000148985|Q9UHJ9|PGAP2 10.823927491677226 0.6659270209832991 6 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 70.64 0.0 0.0 5.3012 0.0 0.0 248.09167678047032 0.0 248.09167678047032 0.0 47.92732127305871 0.0 0.0 0 0.8182503180159344 0.0 0.7302046884880937 1.2302046884880935 DEAQQNA{M(Oxidation (M))|F}Y 5.3012 - 856 1 1.655 71773.7 0.5400000214576721 1584 5187 6772 SUDHL4_400M_050219_2,6773 SUDHL4_400M_050219_2,6773,AECYMNHRFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6774 34.541 144.0 489370.0 25 0 76230.0 20185 LLACLCMAP 9 80 467.7317201425132 933.4488873518264 2 467.7317077517509 MULTI CID FTMS 0 0 0 6772 1006196.125 0.2575576582486985 -14 0.4343147277832031 2 Unmodified _LLACLCMAP_ ENST00000209873.8_1_12:53708561-53708627:-|nuORF 20.871210003555333 0.2717241269066626 6 {I|L}{I|L} 2 7 34.935 0.0 0.0 3.7426 0.0 0.0 0.0 704.2559908502561 704.2559908502561 15.471062485323516 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + {I|L}{I|L} 3.7426 + + 63 + 1 1.655 58893.8 1.0 1585 5187 6772 SUDHL4_400M_050219_2,6774 SUDHL4_400M_050219_2,6774,LLACLCMAP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6775 34.545 257.0 280810.0 25 0 57015.0 + 42679 VTVTASCSSS 10 90 471.2163540422278 940.4181551512556 2 471.2166625857353 MULTI CID FTMS 0 0 0 6772 368685.8125 0.6761582572895386 -2 0.0364646911621093 3 Unmodified _VTVTASCSSS_ REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-11|TTN;REV__nc|ENSG00000155657|Q8WZ42-12|TTN;REV__nc|ENSG00000155657|Q8WZ42-13|TTN;REV__nc|ENSG00000155657|Q8WZ42-2|TTN;REV__nc|ENSG00000155657|Q8WZ42-4|TTN;REV__nc|ENSG00000155657|Q8WZ42-5|TTN;REV__nc|ENSG00000155657|Q8WZ42-7|TTN;REV__nc|ENSG00000155657|Q8WZ42-8|TTN;REV__nc|ENSG00000155657|Q8WZ42|TTN;REV__TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 19.256988751693697 0.5244284437930726 6 VT 2 -1 29.966 0.0 0.0 3.1865 0.0 0.0 0.0 737.2799435445495 737.2799435445495 18.70715563133732 0.0 0.0 0.0 0 0.2614393726401688 0.638272163982407 0.0 0.0 VT 3.1865 + + 104 + 1 1.655 64058.7 1.0 1586 5187 6772 SUDHL4_400M_050219_2,6775 SUDHL4_400M_050219_2,6775,VTVTASCSSS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6776 34.559 800.0 199400.0 25 0 24163.0 + 11812 GLNCRYTV 8 146 463.2333061616866 924.4520593901732 2 463.2335082888603 MULTI CID FTMS 0 0 0 6772 213493.046875 0.662559623337328 -2 0.0364646911621093 4 Unmodified _GLNCRYTV_ REV__ENSG00000203710|ENST00000367049|CR1;REV__nc|ENSG00000203710|P17927|CR1 38.15118350030904 0.2652218139009398 6 {[VA]|[{I|L}G]}ATD 5 -1 52.575 0.0 0.0 5.6872 0.0 0.0 0.0 464.2131204168298 464.2131204168298 31.957640437841874 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.0 {[VA]|[{I|L}G]}ATD 5.6872 - 492 + 1 1.655 121973.2 0.7200000286102295 1587 5187 6772 SUDHL4_400M_050219_2,6776 SUDHL4_400M_050219_2,6776,GLNCRYTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6777 34.573 800.0 91900.0 25 0 10889.0 + 5855 DPVTAEKSPY 10 119 553.7724857695025 1105.530418605805 2 553.7718994021416 MULTI CID FTMS 0 0 0 6772 99688.1171875 1.0 0 0.0 5 Unmodified _DPVTAEKSPY_ REV__ENSG00000009765|ENST00000344419|IYD 19.256988751693697 0.5244284437930726 6 [QT][WH]{[SA]|[TG]}{I|L}TY 9 -1 [QT][WH]{[SA]|[TG]}{I|L} + + 20.701 2.9463 0.35781 1.8725 1.8725 50.295 0.0 0.0 0.0 0.0 9.262137858390815 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 [QT][WH]{[SA]|[TG]}{I|L}TY 1.8725 - 555 + 1 1.655 62050.4 0.5199999809265137 1588 5187 6772 SUDHL4_400M_050219_2,6777 SUDHL4_400M_050219_2,6777,DPVTAEKSPY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6779 34.578 70.0 659900.0 25 0 69597.0 + 44479 YNWETWHHQY 10 68 732.3122927987454 1462.6100326642909 2 732.8143798708916 MULTI CID FTMS 0 0 0 6778 657957.8125 0.3660856955569967 -3 0.0876235961914062 1 Unmodified _YNWETWHHQY_ REV__ENSG00000184949|ENST00000535113|FAM227A;REV__ENST00000540952.5_1_22:38982050-39003412:-|nuORF;REV__nc|ENSG00000184949|F5H4B4-2|FAM227A 3.5964929083625545 0.7100006075494749 6 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y 12 -1 + 54.764 0.0 0.0 3.7443 3.7443 72.26 0.0 0.0 0.0 1.2903267383754269 3.503822946694513 1.2903267383754269 1.2903267383754269 0 0.8935078169319297 0.0 0.6109243748081782 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}[HN]EAQQNA{M(Oxidation (M))|F}Y;[AG]N[HN]EAEQ[PS]{M(Oxidation (M))|F}Y;[AG]N[HN]EAQE[PS]{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAEQ[PS]{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EA[AG]QNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQ[AG]NA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQQGGA{M(Oxidation (M))|F}Y;[HS][PG]DEAQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}[HN]EAQE[PS]{M(Oxidation (M))|F}Y;[HS][PG]DEAEQ[PS]{M(Oxidation (M))|F}Y 3.7443;3.6561;3.4502;3.2856;3.1222;3.1222;3.1222;3.1058;3.0797;2.647 -;-;-;-;-;-;-;-;-;- 698 1 1.643 38683.8 1.0 1589 5188 6778 SUDHL4_400M_050219_2,6779 SUDHL4_400M_050219_2,6779,YNWETWHHQY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6780 34.586 417.0 265650.0 25 0 21058.0 + 38655 TTIKAFFPKK 10 132 394.24112407471966 1179.701542824359 3 394.2415038943291 MULTI CID FTMS 0 0 0 6778 161862.109375 0.0196463531825955 12 -0.3370323181152344 2 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 21.53697664764585 0.484802182336468 6 TT{I|L}KY{I|L}WKK 9 4 + 60.211 0.0 0.0 5.1039 5.1039 84.04 0.0 0.0 0.0 43.304490232519946 15.418789730154003 15.418789730154003 9.110496008391884 0 0.1331596456423734 1.5228787452803376 0.0 0.3807196863200844 TT{I|L}KY{I|L}WKK;TT{I|L}KY{I|L}{[NV]|[RG]}TK 5.1039;4.3316 -;- 113 + 1 1.643 92006.2 1.0 1590 5188 6778 SUDHL4_400M_050219_2,6780 SUDHL4_400M_050219_2,6780,TTIKAFFPKK False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6781 34.594 509.0 154270.0 25 0 13560.0 + 38348 TQMPDPKTF 9 96 540.7550312532467 1079.4955095732932 2 540.7549316287041 MULTI CID FTMS 0 0 0 6778 104649.8125 0.0393057139305108 -15 0.4854736328125 3 Oxidation (M) _TQM(Oxidation (M))PDPKTF_ ENSG00000120963|ENST00000311212|ZNF706 49.52724829834842 0.0414064571532091 6 [QT]{M(Oxidation (M))|F}PDPKT{M(Oxidation (M))|F} 9 0 + 56.716 0.0 0.0 5.2539 5.2539 88.617 0.0 0.0 0.0 40.51789328259873 12.587418566968154 12.587418566968154 16.55320604342912 0 1.1989700043360187 0.0 0.6643943297944485 0.0 + + [QT]{M(Oxidation (M))|F}PDPKT{M(Oxidation (M))|F};[{I|L}P][PS]PDP{M(Oxidation (M))|F}[NP];[KP]T{M(Oxidation (M))|F}{[ET]|[MV]}{M(Oxidation (M))|F}[NP];[KT][YV]DP{M(Oxidation (M))|F}[NP];{[TV]|[{I|L}S]}[YK]DP{M(Oxidation (M))|F}[NP];[KP]T[DV]Y{M(Oxidation (M))|F}[NP];[QT]{M(Oxidation (M))|F}PD{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}VV;[KT]P{M(Oxidation (M))|F}{[ET]|[MV]}{M(Oxidation (M))|F}[NP];[KP]D{[TV]|[{I|L}S]}Y{M(Oxidation (M))|F}[NP];[DP]K{[TV]|[{I|L}S]}Y{M(Oxidation (M))|F}[NP] 5.2539;3.7205;2.7208;2.7012;2.631;2.4921;2.2711;1.7748;1.7092;1.6199 +;-;-;-;-;-;-;-;-;- + 446 + 1 1.643 67847.7 1.0 1591 5188 6778 SUDHL4_400M_050219_2,6781 SUDHL4_400M_050219_2,6781,TQMPDPKTF True False TQMPDPKTF 34.594487 540.754931628704 105776632.0 6778.0 ENSG00000120963|ENST00000311212|ZNF706 10.562254905700684 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6782 34.601 381.0 181850.0 25 0 26119.0 -1 ILMEHIHKL 9 106 383.8863160393483 1148.637118718245 3 383.8864929080009 MULTI CID FTMS 0 0 0 6778 105364.9765625 0.0157689202859313 13 -0.3709335327148437 4 Oxidation (M) _ILM(Oxidation (M))EHIHKL_ ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF;ENST00000498753.1_1_3:141762467-141763034:-|nuORF 20.580933911654288 0.2795815587326093 6 {I|L}{I|L}{M(Oxidation (M))|F}E[H{I|L}]H{I|L}K 9 -1 + 63.159 0.0 0.0 5.4986 5.4986 91.785 0.0 0.0 0.0 50.940031550933824 7.413121923735417 7.413121923735417 63.158519047097386 0 0.0 2.0 0.3807196863200844 0.1549471895720985 {I|L}{I|L}{M(Oxidation (M))|F}E[H{I|L}]H{I|L}K 5.4986 - 99 + 1 1.643 60757.1 1.0 1592 5188 6778 SUDHL4_400M_050219_2,6782 SUDHL4_400M_050219_2,6782,ILMEHIHKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6783 34.603 71.0 709040.0 25 0 94726.0 + 27174 PGAGGFQGGCV 11 85 475.2155577905602 948.4165626479204 2 475.2140380740166 MULTI CID FTMS 0 0 0 6778 504784.59375 0.4328561326837149 -4 0.1133575439453125 5 Unmodified _PGAGGFQGGCV_ REV__ENSG00000133612|ENST00000397238|AGAP3;REV__nc|ENSG00000133612|Q96P47-6|AGAP3 10.073929032068715 0.8255972128077141 6 QGPW 4 -1 20.521 0.0 0.0 2.1637 0.0 0.0 462.193004153583 0.0 462.193004153583 0.0 7.026391799099727 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 QGPW 2.1637 - 181 + 1 1.643 42816.1 1.0 1593 5188 6778 SUDHL4_400M_050219_2,6783 SUDHL4_400M_050219_2,6783,PGAGGFQGGCV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6784 34.609 329.0 345480.0 25 0 29129.0 -1 0 99 910.914947692083 1819.815342450966 2 910.9150268435478 MULTI CID FTMS 0 0 0 6778 355112.21875 1.0 0 0.0 6 6 QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 69.901 0.0 0.0 3.8411 0.0 0.0 734.3753237187374 0.0 734.3753237187374 0.0 21.971580313422194 0.0 0.0 0 0.8494850021680094 0.0 0.3807196863200844 1.5994850021680094 QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.8411 - 2063 1 1.643 77273.6 1.0 1594 5188 6778 SUDHL4_400M_050219_2,6784 SUDHL4_400M_050219_2,6784, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6785 34.621 678.0 113970.0 25 0 10803.0 + 13247 HIIAGAGEL 9 108 440.7474642823194 879.480375631439 2 440.7482787966728 MULTI CID FTMS 0 0 0 6778 141958.546875 1.0 0 0.0 7 Unmodified _HIIAGAGEL_ ENSG00000167658|ENST00000309311|EEF2 42.96799951952854 0.0591636306142405 6 [H{I|L}]{I|L}QAGE{I|L} 8 2 + 63.365 0.0 0.0 7.2048 7.2048 84.618 0.0 0.0 0.0 22.21848749616356 34.848498661843124 22.21848749616356 2.552725051033065 0 0.0 1.5228787452803376 0.0 0.0 [H{I|L}]{I|L}QAGE{I|L};[H{I|L}]{I|L}AGAGE{I|L};[H{I|L}]{I|L}QQE{I|L};[H{I|L}]{I|L}AQGE{I|L};[H{I|L}]{I|L}AGQE{I|L};[H{I|L}]QQ{I|L}E{I|L};{[SA]|[TG]}YK{I|L}GE{I|L};[H{I|L}][QA]{I|L}GE{I|L};{[SA]|[TG]}YKG{I|L}E{I|L};[H{I|L}][QA]G{I|L}E{I|L} 7.2048;6.9146;6.476;6.178;6.178;4.6863;4.6454;4.5733;4.3031;4.231 -;+;-;-;-;-;-;-;-;- + 301 1 1.643 65712.6 1.0 1595 5188 6778 SUDHL4_400M_050219_2,6785 SUDHL4_400M_050219_2,6785,HIIAGAGEL True True HIIAGAGEL 34.620758 440.748278796673 753108.3125 6778.0 ENSG00000167658|ENST00000309311|EEF2 5.632767518361409 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6786 34.634 774.0 167540.0 25 0 9300.9 + 17117 KLGDGRKKCK 10 196 378.2269895782097 0 378.2267639040947 PEAK CID FTMS 0 0 0 6778 119059.1875 1.0 0 0.0 8 Unmodified _KLGDGRKKCK_ REV__chr9:136827864-136828494|15|37.2|0.0|21.83|+|2|None,RABL6|1;REV__ENSG00000196642|ENST00000311502|RABL6;REV__nc|ENSG00000196642|Q3YEC7-2|RABL6;REV__nc|ENSG00000196642|Q3YEC7-3|RABL6;REV__nc|ENSG00000196642|Q3YEC7-4|RABL6;REV__nc|ENSG00000196642|Q3YEC7-5|RABL6;REV__nc|ENSG00000196642|Q3YEC7-6|RABL6 2.0860074813731053 0.3961065659209837 6 E 1 -1 8.8515 0.0 0.0 1.1733 0.0 0.0 377.2204269867622 245.15542017154533 622.3758471583076 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E 1.1733 - 28 + 1 1.643 101866.5 1.0 1596 5188 6778 SUDHL4_400M_050219_2,6786 SUDHL4_400M_050219_2,6786,KLGDGRKKCK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6788 34.642 256.0 322320.0 25 0 32714.0 -1 SMLEDVQRA 9 102 532.7554861287224 1063.4964193242447 2 532.7549926638603 MULTI CID FTMS 0 0 0 6787 92753.2890625 0.061456879961411 6 -0.1232414245605468 1 Oxidation (M) _SM(Oxidation (M))LEDVQRA_ ENSG00000106344|ENST00000223073|RBM28 24.99096001346401 0.2132109383330889 6 VDE{I|L}SE 6 -1 50.636 0.0 0.0 4.7613 0.0 0.0 373.2083912580094 0.0 373.2083912580094 0.0 14.204780657136515 0.0 0.0 0 0.9247425010840048 0.0 0.3252574989159953 0.0 VDE{I|L}SE 4.7613 - 361 1 1.591 66495.3 1.0 1597 5189 6787 SUDHL4_400M_050219_2,6788 SUDHL4_400M_050219_2,6788,SMLEDVQRA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6789 34.656 800.0 201830.0 25 0 12895.0 -1 LKCCFMLFQLQ 11 150 744.3641013887316 1486.713649844263 2 744.3632079958916 MULTI CID FTMS 0 0 0 6787 250808.4375 1.0 0 0.0 2 2 Carbamidomethyl (C) _LKC(Carbamidomethyl (C))C(Carbamidomethyl (C))FMLFQLQ_ ENST00000372577.2_1_9:131744947-131745186:+|nuORF 17.11289562659939 0.6791789249425932 6 PN{I|L}NADQR[{M(Oxidation (M))|F}V]WQ 12 -1 + 108.88 0.0 0.0 7.3237 7.3237 90.039 0.0 0.0 0.0 8.474388675387118 8.474388675387118 8.474388675387118 8.474388675387118 0 2.805462187404089 1.5228787452803376 0.0 1.5858317385287874 PN{I|L}NADQR[{M(Oxidation (M))|F}V]WQ;[NP]{I|L}NAD{[MG]|[TS]}[NP]G{M(Oxidation (M))|F}{I|L}Q;PN{I|L}GGADQR[{M(Oxidation (M))|F}V]WQ;PN{I|L}NADQ[VG][{M(Oxidation (M))|F}V]WQ;PN{I|L}NAD[AG]R[{M(Oxidation (M))|F}V]WQ;PN{I|L}NADQR[H{I|L}]{M(Oxidation (M))|F}Y;PN{I|L}NWQR[{M(Oxidation (M))|F}V]WQ;[NP]{I|L}NW{[MG]|[TS]}[NP]G{M(Oxidation (M))|F}{I|L}Q;PN{I|L}NADHH[KQ]WQ;N{I|L}PNADQR[{M(Oxidation (M))|F}V]WQ 7.3237;6.7536;6.7117;6.7117;6.7117;6.5288;6.3878;6.2898;6.2071;6.0403 -;-;-;-;-;-;-;-;-;- 25091 + 1 1.591 115069.2 0.9700000286102296 1598 5189 6787 SUDHL4_400M_050219_2,6789 SUDHL4_400M_050219_2,6789,LKCCFMLFQLQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6790 34.669 775.0 226570.0 25 0 48189.0 + 17270 KLPEKWESV 9 126 558.3085468424849 1114.6025407517698 2 558.3076049685478 MULTI CID FTMS 0 0 0 6787 252953.71875 0.3007800382851271 -7 0.2145309448242187 3 Unmodified _KLPEKWESV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 53.40400417844725 0.0329064971918313 6 K{I|L}PEK[WE]SV 9 0 + 65.891 0.0 0.0 5.9116 5.9116 91.243 0.0 0.0 0.0 9.013845406013688 8.13847355682006 8.13847355682006 18.75930806161078 0 1.924742501084005 1.0457574905606752 0.7134679910804405 0.0 + + K{I|L}PEK[WE]SV;[WE]KPE{I|L}KSV;[EP]KWE{I|L}KSV;K{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}AP;[VS][PA]WE{I|L}KSV;[K{I|L}]PE[WE]KSV;K{I|L}V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}QS{[HG]|PP}{I|L};[EP]K{I|L}[WE]KSV;[VS]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}PE{I|L}KSV;[TP][VG]WE{I|L}KSV 5.9116;4.2286;4.0434;3.5916;3.1173;3.0331;2.9679;2.9407;2.5732;2.4819 +;-;-;-;-;-;-;-;-;- + 1044 + 1 1.591 134579.2 1.0 1599 5189 6787 SUDHL4_400M_050219_2,6790 SUDHL4_400M_050219_2,6790,KLPEKWESV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6792 34.682 611.0 219340.0 25 0 17240.0 + 63 AAEEGLREL 9 143 494.25849599992495 986.50243906665 2 494.2591125369072 MULTI CID FTMS 0 0 0 6791 409139.3125 0.8909642697172709 -6 0.2094573974609375 1 Unmodified _AAEEGLREL_ ENSG00000167657|ENST00000545797|DAPK3;ENST00000595279.1_1_19:3959101-3961233:-|nuORF 61.60191391372663 0.0251951588191061 6 AAEEG{I|L}{[RE]|[WV]}{I|L} 9 0 + 91.916 0.0 0.0 9.3174 9.3174 85.943 0.0 0.0 0.0 50.54113429432413 17.275071725447404 17.275071725447404 1.6334835803019132 0 0.8494850021680094 2.0 1.579689690656103 0.0 + + AAEEG{I|L}{[RE]|[WV]}{I|L};AAEE{I|L}G{[RE]|[WV]}{I|L};AAEE{I|L}REG{I|L};AAE{M(Oxidation (M))|F}{I|L}G[VP][PS];AA{M(Oxidation (M))|F}{I|L}EG[VP][PS];AA{M(Oxidation (M))|F}E{I|L}G[VP][PS];{[QN]|[E{I|L}]|[KN]}RW{I|L}[RD];{[QN]|[E{I|L}]|[KN]}RW[RD]{I|L};[RD]E[RH]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};{[QN]|[E{I|L}]|[KN]}R[RD]W{I|L} 9.3174;9.1518;7.6587;5.2432;4.6917;4.0006;2.4945;2.1893;1.7975;1.4304 +;-;-;-;-;-;-;-;-;- + 984 + 1 1.591 100885.7 1.0 1600 5190 6791 SUDHL4_400M_050219_2,6792 SUDHL4_400M_050219_2,6792,AAEEGLREL True True AAEEGLREL 34.681845 494.259112536907 3125956.0 6791.0 ENST00000595279.1_1_19:3959101-3961233:-|nuORF;;ENSG00000167657|ENST00000545797|DAPK3 4.073352177937825 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6793 34.693 643.0 326290.0 25 0 45468.0 + 8874 FADQEVRSL 9 167 532.7724264794294 1063.5303000256588 2 532.7725707888603 MULTI CID FTMS 0 0 0 6791 162823.921875 0.3758494702228717 -3 0.1472587585449218 2 Unmodified _FADQEVRSL_ ENSG00000011405|ENST00000691414|PIK3C2A 51.41523569358685 0.0372669606867193 6 {M(Oxidation (M))|F}ADQEVRS{I|L} 9 0 + 80.334 0.0 0.0 7.5536 7.5536 84.919 0.0 0.0 0.0 6.714644737537498 2.167091099639464 2.167091099639464 2.167091099639464 0 1.1382104921644451 0.0 0.8851518780601922 1.0501648626366045 + + {M(Oxidation (M))|F}ADQEVRS{I|L};{M(Oxidation (M))|F}ADQEVRTV;{M(Oxidation (M))|F}AD[AG]EVRS{I|L};{M(Oxidation (M))|F}AD[AG]EVRTV;{M(Oxidation (M))|F}WQA[HK]T{M(Oxidation (M))|F};{M(Oxidation (M))|F}W[AG]A[HK]T{M(Oxidation (M))|F};{M(Oxidation (M))|F}ADVVS[WQ]{I|L};AA[R{M(Oxidation (M))|F}]SVVDAE;[{M(Oxidation (M))|F}T]RQVVDAE;{M(Oxidation (M))|F}A[WQ][HK]T{M(Oxidation (M))|F} 7.5536;7.3498;6.6877;6.484;5.786;4.9151;4.6544;4.1486;3.8409;3.763 +;-;-;-;-;-;-;-;-;- + 2931 + 1 1.591 159823.3 1.0 1601 5190 6791 SUDHL4_400M_050219_2,6793 SUDHL4_400M_050219_2,6793,FADQEVRSL True True FADQEVRSL 34.693053 532.77257078886 3835454.75 6791.0 ENSG00000011405|ENST00000691414|PIK3C2A 8.192898273468018 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6795 34.707 527.0 228300.0 25 0 28827.0 + 14980 ILQEREYRL 9 88 407.2311677441968 1218.6716738327902 3 407.5656616091728 MULTI CID FTMS 0 0 0 6794 266807.4375 0.8732429717335153 -2 0.05889892578125 1 Unmodified _ILQEREYRL_ ENSG00000080503|ENST00000349721|SMARCA2;ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000080503|P51531-2|SMARCA2;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4 20.580933911654288 0.2795815587326093 6 {I|L}{I|L}{I|L}{[WN]|[YH]}E{I|L}[YR] 9 5 + 62.113 0.0 0.0 5.0968 5.0968 81.498 0.0 0.0 0.0 48.12855286129228 5.954387282529794 5.954387282529794 5.76606256887672 0 0.3494850021680094 2.0 0.4247425010840047 0.4247425010840047 {I|L}{I|L}{I|L}{[WN]|[YH]}E{I|L}[YR];{I|L}{I|L}Q{[RE]|[WV]}E{I|L}[YR];{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[DG]{I|L}[YR];{I|L}{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[RE]|[WV]}[YR];{I|L}{I|L}Q{[QN]|[E{I|L}]|[KN]}[DG]{I|L}[YR];{I|L}{I|L}{I|L}{[WN]|[YH]}E[YR]{I|L};{I|L}{I|L}Q{[QN]|[E{I|L}]|[KN]}{[RE]|[WV]}[YR];{I|L}{I|L}Q[WR]{[QG]|[NA]}[YR];{I|L}{I|L}[AG]{[RE]|[WV]}E{I|L}[YR];{I|L}{I|L}Q{[RE]|[WV]}E[YR]{I|L} 5.0968;4.6236;4.5232;4.3787;4.0501;3.9497;3.9056;3.9056;3.868;3.4765 -;-;-;-;-;-;-;-;-;+ + 262 + 1 1.591 97941.1 1.0 1602 5191 6794 SUDHL4_400M_050219_2,6795 SUDHL4_400M_050219_2,6795,ILQEREYRL False True ILQEREYRL 34.706694 407.565661609173 1648637.625 6794.0 ENSG00000080503|ENST00000349721|SMARCA2;;nc|ENSG00000127616|P51532-5|SMARCA4;;nc|ENSG00000127616|P51532-2|SMARCA4;;nc|ENSG00000127616|P51532-3|SMARCA4;;nc|ENSG00000127616|P51532-4|SMARCA4;;ENSG00000127616|ENST00000344626|SMARCA4;;nc|ENSG00000080503|P51531-2|SMARCA2 0.3398073712984721 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6796 34.718 643.0 29569.0 25 0 2522.4 -1 0 33 1163.7835387038224 6976.657573423335 6 1164.447192370892 MULTI CID FTMS 0 0 0 6794 263899.9375 0.8472707947249033 1 -0.0248832702636718 2 6 W 1 -1 5.4846 0.0 0.0 0.078613 0.0 0.0 6081.155268344086 706.3805521870506 6787.535820531137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.078613 - 7 + 1 1.591 21743.2 1.0 1603 5191 6794 SUDHL4_400M_050219_2,6796 SUDHL4_400M_050219_2,6796, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6798 34.722 35.0 1494000.0 25 0 242370.0 + 11650 GLATDVQTV 9 81 452.2428486776828 902.4711444221656 2 452.2426330447197 MULTI CID FTMS 0 0 0 6797 2132258.25 0.51536421740201 1 -0.01263427734375 1 Unmodified _GLATDVQTV_ ENSG00000277791|ENST00000619426|PSMB3 46.92087301778293 0.0471210510596396 6 {[VA]|[{I|L}G]}GTEV{[SA]|[TG]}AV 10 4 + 47.219 0.0 0.0 5.2321 5.2321 58.161 0.0 0.0 0.0 10.206808544614596 5.496812376923046 5.496812376923046 0.0 0 0.2742275032520141 2.0 0.958170666312956 0.0 {[VA]|[{I|L}G]}GTEV{[SA]|[TG]}AV;{[VA]|[{I|L}G]}ASEV{[SA]|[TG]}AV;{[VA]|[{I|L}G]}GTD{I|L}{[SA]|[TG]}AV;{[VA]|[{I|L}G]}ASD{I|L}{[SA]|[TG]}AV;{[VA]|[{I|L}G]}GTVE{[SA]|[TG]}AV;{[VA]|[{I|L}G]}ASVE{[SA]|[TG]}AV;{[TV]|[{I|L}S]}QEV{[SA]|[TG]}AV;{[TV]|[{I|L}S]}QD{I|L}{[SA]|[TG]}AV;{[VA]|[{I|L}G]}{[ES]|[DT]|[{I|L}C]}AV{[SA]|[TG]}AV;{[VA]|[{I|L}G]}{[ES]|[DT]|[{I|L}C]}G{I|L}{[SA]|[TG]}AV 5.2321;5.2321;5.1073;5.1073;4.5786;4.5786;4.1012;3.9763;3.609;3.4842 -;-;-;-;-;-;-;-;-;- 784 1 1.565 44175.6 1.0 1604 5192 6797 SUDHL4_400M_050219_2,6798 SUDHL4_400M_050219_2,6798,GLATDVQTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6799 34.731 474.0 263170.0 25 0 29883.0 + 12080 GQFPGHNEF 9 130 516.7302584285678 1031.4459639239356 2 516.7296020388603 MULTI CID FTMS 0 0 0 6797 385200.4375 1.0 0 0.0 2 Unmodified _GQFPGHNEF_ ENSG00000163171|ENST00000295324|CDC42EP3 47.74868867922204 0.0453060283459952 6 {[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}N{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F} 8 5 + 43.739 0.0 0.0 4.2405 4.2405 78.355 0.0 0.0 0.0 29.16940236407101 3.679767852945943 3.679767852945943 5.051499783199063 0 0.8807196863200843 0.7958800173440752 0.7614393726401688 0.3494850021680094 {[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}N{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F};{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;[WE]{[WT]|[RM]}P[WQ];{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}GG{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F};{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}GG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y;{[QG]|[NA]}{M(Oxidation (M))|F}[YG]{M(Oxidation (M))|F}[WQ];{[QG]|[NA]}[HD]YV[WQ];{[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}[YG][WQ];{[WT]|[RM]}EEGP[WQ];{[WT]|[RM]}[WE]P[WQ] 4.2405;3.7508;3.0399;3.0037;2.8528;2.7683;2.4691;2.3565;2.3405;2.0704 -;-;-;-;-;-;-;-;-;- 938 + 1 1.565 99147.2 1.0 1605 5192 6797 SUDHL4_400M_050219_2,6799 SUDHL4_400M_050219_2,6799,GQFPGHNEF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6801 34.735 4.9 7306800.0 25 0 2231600.0 28715 PVSVLEVGP 9 56 448.75814221499 895.50173149678 2 448.7580749392509 MULTI CID FTMS 0 0 0 6800 11054703.0 0.7532999410222871 2 -0.026824951171875 1 Unmodified _PVSVLEVGP_ ENST00000377080.7_1_X:47092827-47092914:+|nuORF 18.13498045792455 0.3457906370836843 6 {[SA]|[TG]}E{I|L}{I|L} 5 7 18.015 0.0 0.0 2.0118 0.0 0.0 0.0 379.1958592646113 379.1958592646113 -3.667053245199625 0.0 -3.667053245199625 0.0 0 0.0 0.0 0.7302046884880937 0.0 {[SA]|[TG]}E{I|L}{I|L} 2.0118 - 66 1 1.565 34881.7 1.0 1606 5193 6800 SUDHL4_400M_050219_2,6801 SUDHL4_400M_050219_2,6801,PVSVLEVGP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6802 34.745 612.0 172460.0 25 0 12369.0 + + 24097 KLHGVNINV 9 122 497.29571385303257 992.5768747728652 2 497.2956725955009 MULTI CID FTMS 0 0 0 6800 41716.3046875 0.0560627243007896 5 -0.1149444580078125 2 Unmodified _LYIMKLNV_ ENSG00000173914|ENST00000310046|RBM4B;nc|ENSG00000173933|Q9BWF3-4|RBM4;ENSG00000173933|ENST00000310092|RBM4;nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4 32.116972079565 0.368454113111938 6 D{I|L}K{I|L}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 7 -1 21.987 0.0 0.0 2.2152 0.0 0.0 116.0918402966708 0.0 116.0918402966708 0.0 9.51290421938296 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.8494850021680094 D{I|L}K{I|L}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 2.2152 - 403 + 1 1.565 83985.3 1.0 1607 5193 6800 SUDHL4_400M_050219_2,6802 SUDHL4_400M_050219_2,6802,LYIMKLNV False False KLHGVNINV 34.745342 497.295672595501 6870183.5 6800.0 ENSG00000173914|ENST00000310046|RBM4B;;nc|ENSG00000173933|Q9BWF3-4|RBM4;;ENSG00000173933|ENST00000310092|RBM4;;nc|ENSG00000173933|Q9BWF3-3|RBM4;;nc|ENSG00000173933|Q9BWF3-2|RBM4 6.005725065867106 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6804 34.755 467.0 200080.0 25 0 20402.0 + 10012 FPLMLDLAP 9 94 508.77988973047206 1015.545226527744 2 508.7791625857353 MULTI CID FTMS 0 0 0 6803 330742.09375 0.6710050785596834 24 -0.8743934631347656 1 Unmodified _FPLMLDLAP_ ENSG00000123552|ENST00000500704|USP45;nc|ENSG00000123552|Q70EL2-3|USP45 38.15118350030904 0.0856056900103839 6 {M(Oxidation (M))|F}PTGAR[PS]A{I|L} 10 7 + 55.117 0.0 0.0 5.4274 5.4274 82.245 0.0 0.0 0.0 39.00814100469148 4.69273760456403 4.69273760456403 5.00602350569185 0 0.75 0.0 0.805462187404089 0.0 {M(Oxidation (M))|F}PTGAR[PS]A{I|L};{M(Oxidation (M))|F}PTGAR{[TV]|[{I|L}S]}AP;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}TY[KT]{I|L}{M(Oxidation (M))|F};{M(Oxidation (M))|F}PTQR[PS]A{I|L};{M(Oxidation (M))|F}PTQR{[TV]|[{I|L}S]}AP;{M(Oxidation (M))|F}PTG[KG]{[QN]|[E{I|L}]|[KN]}AP;{M(Oxidation (M))|F}P{I|L}{[ET]|[MV]}[EP]A{I|L};{M(Oxidation (M))|F}P{I|L}{[ET]|[MV]}{[QN]|[E{I|L}]|[KN]}AP;[VS]{[TV]|[{I|L}S]}R[NP]P{M(Oxidation (M))|F};[VS]{[QN]|[E{I|L}]|[KN]}A[HT]{I|L}{M(Oxidation (M))|F} 5.4274;4.9344;4.7932;4.7842;4.2912;3.8543;3.1658;2.6729;0.93152;0.68547 -;-;-;-;-;-;-;-;-;- 371 + 1 1.565 83190.3 1.0 1608 5194 6803 SUDHL4_400M_050219_2,6804 SUDHL4_400M_050219_2,6804,FPLMLDLAP True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6805 34.757 85.0 963350.0 25 0 69670.0 43539 WWWWIWWQWW 10 79 874.9037657894092 1747.7929786456184 2 874.9086791872978 MULTI CID FTMS 0 0 0 6803 953968.9375 0.5643006477616344 -9 0.2597236633300781 2 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 8 46.929 0.0 0.0 2.685 0.0 0.0 734.36918837715 0.0 734.36918837715 0.0 23.111206103324733 0.0 0.0 0 0.5 0.0 0.0 1.1549471895720984 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.685 - 678 1 1.565 60105.5 1.0 1609 5194 6803 SUDHL4_400M_050219_2,6805 SUDHL4_400M_050219_2,6805,WWWWIWWQWW False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 6807 34.768 494.0 263300.0 25 0 25534.0 + 38875 TVKGVSLSSY 10 134 520.7848826929054 1039.5552124526107 2 520.7847778201103 MULTI CID FTMS 0 0 0 6806 287474.84375 0.5773775601403903 -2 0.026824951171875 1 Unmodified _TVKGVSLSSY_ ENSG00000101166|ENST00000355937|PRELID3B;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 78.06048673739656 0.0186573233964999 6 {[TV]|[{I|L}S]}KGVS{I|L}SSY 10 0 + 74.18 0.0 0.0 7.1357 7.1357 81.631 0.0 0.0 0.0 17.31385690090015 44.73274804785078 17.31385690090015 0.682503180159344 0 1.8182503180159344 1.6989700043360187 1.7104093769761877 0.0 + + {[TV]|[{I|L}S]}KGVS{I|L}SSY;{[TV]|[{I|L}S]}KGVSS{I|L}SY;{[TV]|[{I|L}S]}[VG]KS{I|L}SSY;{[TV]|[{I|L}S]}[VG]KSS{I|L}SY;{[TV]|[{I|L}S]}KKD{I|L}SSY;{[TV]|[{I|L}S]}KKDS{I|L}SY;{[TV]|[{I|L}S]}KDK{I|L}SSY;{[TV]|[{I|L}S]}KDKS{I|L}SY;{[TV]|[{I|L}S]}SK[VG]{I|L}SSY;{[TV]|[{I|L}S]}SK[VG]S{I|L}SY 7.1357;7.0701;6.6982;6.6326;6.4528;6.3871;5.9498;5.8841;5.8479;5.7823 +;-;-;-;-;-;-;-;-;- + 2043 1 1.565 99302.3 1.0 1610 5195 6806 SUDHL4_400M_050219_2,6807 SUDHL4_400M_050219_2,6807,TVKGVSLSSY True True TVKGVSLSSY 34.767954 520.78477782011 2503732.75 6806.0 ENSG00000101166|ENST00000355937|PRELID3B;;nc|ENSG00000101166|Q9Y3B1-2|PRELID3B 6.361697196960449 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6808 34.772 222.0 377360.0 25 0 68912.0 + + -1 SLAEPRVSV 9 95 479.2136588207554 956.4127647083108 2 479.2153808474541 MULTI CID FTMS 0 0 0 6806 208207.375 0.7843246111153687 2 -0.0425033569335937 2 Carbamidomethyl (C) _SIFMC(Carbamidomethyl (C))NSV_ ENSG00000169710|ENST00000306749|FASN 13.50788311687929 0.7113601687236069 6 {[TV]|[{I|L}S]}A 3 -1 22.676 0.0 0.0 2.3709 0.0 0.0 0.0 682.2361039019233 682.2361039019233 10.893325784201249 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}A 2.3709 - 87 1 1.565 69916.2 1.0 1611 5195 6806 SUDHL4_400M_050219_2,6808 SUDHL4_400M_050219_2,6808,SIFMCNSV False False SLAEPRVSV 34.77214 479.215380847454 1752896.25 6806.0 ENSG00000169710|ENST00000306749|FASN 4.365667819976807 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6810 34.776 26.0 1642500.0 25 0 366330.0 20810 LLWAFCAP 8 54 460.7368533575841 919.4591537819682 2 460.7367126345634 MULTI CID FTMS 0 0 0 6809 1544419.5 0.6256434624699175 6 -0.223358154296875 1 Unmodified _LLWAFCAP_ ENSG00000180398|ENST00000319466|MCFD2;ENST00000477791.5_1_2:47134810-47142912:-|nuORF;ENST00000487121.1_1_2:47136034-47168791:-|nuORF 11.114462752807354 0.7467182956244686 6 {I|L} 1 7 5.4846 0.0 0.0 0.5965 0.0 0.0 721.2850032466151 82.06711755924061 803.3521208058557 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.5965 + + 10 + 1 1.565 41799.9 1.0 1612 5196 6809 SUDHL4_400M_050219_2,6810 SUDHL4_400M_050219_2,6810,LLWAFCAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6811 34.777 17.0 2380700.0 25 0 361250.0 14667 IIPGGIYDA 9 53 459.7491399470667 917.4837269609334 2 459.7490417361259 MULTI CID FTMS 0 0 0 6809 3107409.0 0.5592879205840091 2 -0.073333740234375 2 Unmodified _IIPGGIYDA_ ENSG00000101441|ENST00000217423|CST4 12.531546534597751 0.4974689918368763 6 {I|L}{I|L}[TA]D 5 6 22.504 0.0 0.0 2.4528 0.0 0.0 0.0 401.1815584772094 401.1815584772094 17.019309113210497 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}{I|L}[TA]D 2.4528 - 21 + 1 1.565 39699.2 1.0 1613 5196 6809 SUDHL4_400M_050219_2,6811 SUDHL4_400M_050219_2,6811,IIPGGIYDA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6812 34.788 613.0 219210.0 25 0 15490.0 + 40492 VIRDVEQQF 9 138 567.3009587994432 1132.5873646656862 2 567.3010742068291 MULTI CID FTMS 0 0 0 6809 217115.09375 0.2637842480511233 -5 0.0791282653808593 3 Unmodified _VIRDVEQQF_ ENSG00000076003|ENST00000264156|MCM6 72.96794272382148 0.0199516581995792 6 [{I|L}V]RDVEQQ{M(Oxidation (M))|F} 9 0 + 83.201 0.0 0.0 7.3461 7.3461 90.057 0.0 0.0 0.0 19.911852558481414 55.07540445172717 19.911852558481414 8.45098040014257 0 1.2059771852360797 1.6989700043360187 0.6694451763165201 0.3054621874040891 + + [{I|L}V]RDVEQQ{M(Oxidation (M))|F};[{I|L}V]RDEVQQ{M(Oxidation (M))|F};[{I|L}V]RDVEQ[AG]{M(Oxidation (M))|F};[{I|L}V]RDVE[AG]Q{M(Oxidation (M))|F};[{I|L}V]RDEQVQ{M(Oxidation (M))|F};[{I|L}V]RDEVQ[AG]{M(Oxidation (M))|F};[{I|L}V]RDEV[AG]Q{M(Oxidation (M))|F};[{I|L}V]RDVE[AG][AG]{M(Oxidation (M))|F};[DV][R{I|L}]VEQQ{M(Oxidation (M))|F};[AG]QG[VS]{I|L}VQQ{M(Oxidation (M))|F} 7.3461;6.5999;6.5331;6.5331;5.8134;5.7869;5.7869;5.7239;5.3215;5.131 +;-;-;-;-;-;-;-;-;- + 1821 1 1.565 102955.3 1.0 1614 5196 6809 SUDHL4_400M_050219_2,6812 SUDHL4_400M_050219_2,6812,VIRDVEQQF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6813 34.8 672.0 98993.0 25 0 4077.6 + 17139 KLHYVVTEV 9 116 544.3108001648358 0 544.3102905154228 PEAK CID FTMS 0 0 0 6809 155128.1875 1.0 0 0.0 4 Unmodified _KLHYVVTEV_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 47.74868867922204 0.0378261468855112 6 ETVP 4 8 35.305 0.0 0.0 3.2491 0.0 0.0 117.0744679060402 540.3025191017275 657.3769870077678 0.0 0.0 0.0 0.0 0 1.1505149978319906 0.0 0.4247425010840047 0.0 ETVP 3.2491 - 393 + 1 1.565 54391.6 1.0 1615 5196 6809 SUDHL4_400M_050219_2,6813 SUDHL4_400M_050219_2,6813,KLHYVVTEV True True KLHYVVTEV 34.799848 544.310290515423 706466.5 6809.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 5.426999092102051 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6815 34.804 35.0 3419900.0 25 0 678740.0 + 20757 LLSTMDSPA 9 75 467.7317201425132 933.4488873518264 2 467.7315551638603 MULTI CID FTMS 0 0 0 6814 1668088.625 0.4269833577487603 -4 0.0693283081054687 1 Unmodified _LLSTMDSPA_ ENSG00000076555|ENST00000338432|ACACB;ENST00000538526.5_3_12:109697932-109704164:+|nuORF;nc|ENSG00000076555|O00763-2|ACACB;nc|ENSG00000076555|O00763-3|ACACB 34.10243960390752 0.1078313939113124 6 {I|L}{I|L}SA 4 5 41.419 0.0 0.0 4.4373 0.0 0.0 0.0 546.1895235650999 546.1895235650999 12.562893943202624 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.4247425010840047 0.0 {I|L}{I|L}SA 4.4373 - 83 + 1 1.542 95122.7 1.0 1616 5197 6814 SUDHL4_400M_050219_2,6815 SUDHL4_400M_050219_2,6815,LLSTMDSPA True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6816 34.818 788.0 98933.0 25 0 6691.8 -1 LSVPCPHLT 9 123 512.2664339565858 1022.5183149799716 2 512.2667114138603 MULTI CID FTMS 0 0 0 6814 78474.265625 0.2085586157597939 7 -0.2925910949707031 2 Carbamidomethyl (C) _LSVPC(Carbamidomethyl (C))PHLT_ ENST00000430799.7_2_1:27107308-27107494:+|nuORF 15.847184025352805 0.4077185912009129 6 [EP][WH]{I|L}Q{I|L}T 8 -1 [EP][WH]{I|L}Q + + 20.507 2.4741 0.31303 2.0056 2.0056 50.379 0.0 0.0 0.0 0.0 4.30439952406784 0.0 0.0 0 0.4247425010840047 0.0 0.4666152729074456 0.0 [EP][WH]{I|L}Q{I|L}T 2.0056 - 350 + 1 1.542 64069.2 1.0 1617 5197 6814 SUDHL4_400M_050219_2,6816 SUDHL4_400M_050219_2,6816,LSVPCPHLT False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6817 34.832 798.0 152250.0 25 0 6050.8 -1 0 81 629.7678298611478 3143.802766972739 5 630.1689941287041 MULTI CID FTMS 0 0 0 6814 147533.796875 1.0 0 0.0 3 6 {NN|[MP]|[D{I|L}]|[EV]}VGA 5 -1 11.682 0.0 0.0 0.3716 0.0 0.0 0.0 2685.539192103851 2685.539192103851 -1.5051499783199065 0.0 -1.5051499783199065 0.0 0 0.0 0.0 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}VGA 0.3716 - 63 1 1.542 89903.5 1.0 1618 5197 6814 SUDHL4_400M_050219_2,6817 SUDHL4_400M_050219_2,6817, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6818 34.845 800.0 109950.0 25 0 9873.5 + -1 LADPLPMCL 9 146 523.2574326647496 0 523.2567016482353 PEAK CID FTMS 0 0 0 6814 102614.921875 1.0 0 0.0 4 Carbamidomethyl (C),Oxidation (M) _LADPLPM(Oxidation (M))C(Carbamidomethyl (C))L_ REV__ENSG00000039987|ENST00000553030|BEST2 9.347437153973935 0.3197567915069932 6 TN{I|L} 3 -1 15.732 0.0 0.0 1.5062 0.0 0.0 233.09123871058392 480.2107943170532 713.3020330276371 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.3807196863200844 TN{I|L} 1.5062 - 460 + 1 1.542 68370.4 0.9700000286102296 1619 5197 6814 SUDHL4_400M_050219_2,6818 SUDHL4_400M_050219_2,6818,LADPLPMCL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6820 34.85 50.0 888620.0 25 0 103040.0 -1 SQRAFCTMHFY 11 55 732.3122927987454 1462.6100326642909 2 732.3134033083916 MULTI CID FTMS 0 0 0 6819 879102.8125 0.4363333658642451 6 -0.2469749450683593 1 Carbamidomethyl (C),Oxidation (M) _SQRAFC(Carbamidomethyl (C))TM(Oxidation (M))HFY_ ENST00000277415.15_1_9:137989658-137989826:+|nuORF 5.731851221503515 0.8481046878870278 6 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 60.807 0.0 0.0 4.1574 0.0 0.0 378.16588027168126 0.0 378.16588027168126 0.0 43.8173657553704 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.4247425010840047 DEAQQNA{M(Oxidation (M))|F}Y 4.1574 - 264 1 1.542 41178.4 1.0 1620 5198 6819 SUDHL4_400M_050219_2,6820 SUDHL4_400M_050219_2,6820,SQRAFCTMHFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6821 34.851 38.0 1134900.0 25 0 119120.0 + 38349 TQMPDPKTF 9 62 540.7550312532467 1079.4955095732932 2 540.7551757693291 MULTI CID FTMS 0 0 0 6819 1625459.875 0.6105109920982791 -5 0.1149444580078125 2 Oxidation (M) _TQM(Oxidation (M))PDPKTF_ ENSG00000120963|ENST00000311212|ZNF706 49.55428908609986 0.0413471690215031 6 [QT]{M(Oxidation (M))|F}[DP][KP]T{M(Oxidation (M))|F} 9 0 + 34.625 0.0 0.0 3.2075 3.2075 74.452 0.0 0.0 0.0 3.960828060918832 3.960828060918832 3.960828060918832 3.960828060918832 0 1.3494850021680094 0.0 0.6747425010840047 0.0 + + [QT]{M(Oxidation (M))|F}[DP][KP]T{M(Oxidation (M))|F};[KP]T{M(Oxidation (M))|F}{[ET]|[MV]}{M(Oxidation (M))|F}[NP];[{M(Oxidation (M))|F}T][KP]{[ET]|[MV]}{M(Oxidation (M))|F}[NP];[KP]T[DP][{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[KP][DP]T[{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[DP][KP]T[{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 3.2075;2.8406;0.8692;0.84962;0.72977;0.36161 +;-;-;-;-;- + 108 + 1 1.542 45159.3 1.0 1621 5198 6819 SUDHL4_400M_050219_2,6821 SUDHL4_400M_050219_2,6821,TQMPDPKTF True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6822 34.853 113.0 445150.0 25 0 39231.0 + 5627 DPCIYKFYEFY 11 65 744.3295021326318 1486.6444513320637 2 744.3325073122978 MULTI CID FTMS 0 0 0 6819 306743.59375 0.3029633122162013 -4 0.1001663208007812 3 Unmodified _DPCIYKFYEFY_ REV__ENSG00000163840|ENST00000296161|DTX3L 5.731851221503515 0.8481046878870278 6 ANQQAEEE{I|L}Q 10 -1 54.703 0.0 0.0 3.6796 0.0 0.0 328.1363116274338 0.0 328.1363116274338 0.0 34.06804392152253 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.6861818737241735 ANQQAEEE{I|L}Q 3.6796 - 696 + 1 1.542 43817.0 1.0 1622 5198 6819 SUDHL4_400M_050219_2,6822 SUDHL4_400M_050219_2,6822,DPCIYKFYEFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6823 34.867 800.0 172890.0 25 0 9122.6 -1 SMSMLQMRAP 10 135 592.2664198796094 1182.5182868260188 2 592.2683593630791 MULTI CID FTMS 0 0 0 6819 122134.40625 0.5250723211937623 -2 0.073333740234375 4 2 Oxidation (M) _SM(Oxidation (M))SM(Oxidation (M))LQMRAP_ ENSG00000243978|ENST00000520821|RTL9 13.90604991867851 0.6142120002215601 6 {I|L}QG{[VA]|[{I|L}G]}EV 7 -1 29.914 0.0 0.0 2.5297 0.0 0.0 468.1325301502608 0.0 468.1325301502608 0.0 16.726307269461742 0.0 0.0 0 1.0 0.0 0.5 0.0 {I|L}QG{[VA]|[{I|L}G]}EV 2.5297 - 169 + 1 1.542 104757.7 0.9300000071525574 1623 5198 6819 SUDHL4_400M_050219_2,6823 SUDHL4_400M_050219_2,6823,SMSMLQMRAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6825 34.871 89.0 456580.0 25 0 75681.0 + -1 NAQIHGMY 8 68 475.2155577905602 948.4165626479204 2 475.2138549685478 MULTI CID FTMS 0 0 0 6824 387809.09375 0.3325488666227766 7 -0.2753334045410156 1 Oxidation (M) _NAQIHGM(Oxidation (M))Y_ REV__ENSG00000178814|ENST00000618853|OPLAH 5.760428011301431 0.7893668129297577 6 Y 1 -1 13.099 0.0 0.0 1.3811 0.0 0.0 767.3416247590518 0.0 767.3416247590518 0.0 2.215845378980584 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.3811 + + 49 + 1 1.542 38153.5 1.0 1624 5199 6824 SUDHL4_400M_050219_2,6825 SUDHL4_400M_050219_2,6825,NAQIHGMY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6826 34.885 800.0 159700.0 25 0 24492.0 + 33738 SLAEPRVSV 9 142 479.2712238593821 956.5278947855644 2 479.2716857790947 MULTI CID FTMS 0 0 0 6824 81422.6328125 0.3799697572846364 6 -0.2537155151367187 2 Unmodified _SLAEPRVSV_ ENSG00000169710|ENST00000306749|FASN 16.149105407346934 0.3995459350917656 6 {[TV]|[{I|L}S]}AE{I|L} 5 5 39.798 0.0 0.0 4.1607 0.0 0.0 0.0 440.2211092584594 440.2211092584594 28.829020890213087 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 {[TV]|[{I|L}S]}AE{I|L} 4.1607 - 286 + 1 1.542 102087.9 0.7799999713897705 1625 5199 6824 SUDHL4_400M_050219_2,6826 SUDHL4_400M_050219_2,6826,SLAEPRVSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6827 34.896 633.0 261270.0 25 0 19280.0 + 40771 VLLAAGPSAA 10 135 435.25848513447033 868.5024173357407 2 435.2585327029228 MULTI CID FTMS 0 0 0 6824 327295.0625 0.9544316181749356 -1 0.0216712951660156 3 Unmodified _VLLAAGPSAA_ ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210 36.04419817259434 0.1993394420055842 6 [{I|L}V]{I|L}AAGR 7 4 40.666 0.0 0.0 4.6824 0.0 0.0 0.0 185.05538329265224 185.05538329265224 19.02806186028088 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}V]{I|L}AAGR 4.6824 - 555 1 1.542 130964.0 1.0 1626 5199 6824 SUDHL4_400M_050219_2,6827 SUDHL4_400M_050219_2,6827,VLLAAGPSAA False True VLLAAGPSAA 34.896106 435.258532702923 2006691.875 6824.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENSG00000132182|ENST00000254508|NUP210 4.853190898895264 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6828 34.91 800.0 78331.0 25 0 5384.5 -1 0 35 1049.442070508915 0 1049.774829089642 PEAK CID FTMS 0 0 0 6824 44514.73046875 0.5462967517125328 -1 0.0216712951660156 4 6 V 1 -1 6.9897 0.0 0.0 0.33334 0.0 0.0 1047.3901702152932 947.401806348442 1994.7919765637355 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.33334 - 8 + 1 1.542 50518.9 0.6899999976158142 1627 5199 6824 SUDHL4_400M_050219_2,6828 SUDHL4_400M_050219_2,6828, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6830 34.916 126.0 534830.0 25 0 109830.0 17071 KLDLSPWASV 10 90 558.3085468424849 1114.6025407517698 2 558.3082763552666 MULTI CID FTMS 0 0 0 6829 537235.5 0.638811380424228 4 -0.1822090148925781 1 Unmodified _KLDLSPWASV_ ENSG00000167419|ENST00000262290|LPO;nc|ENSG00000167419|P22079-2|LPO 30.63653989081413 0.2803493085145199 6 [EP]KWESV 7 7 44.073 0.0 0.0 3.9541 0.0 0.0 0.0 256.1700205703823 256.1700205703823 13.103575941663197 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.7742275032520141 0.0 [EP]KWESV 3.9541 - 268 1 1.534 55323.0 1.0 1628 5200 6829 SUDHL4_400M_050219_2,6830 SUDHL4_400M_050219_2,6830,KLDLSPWASV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6831 34.93 800.0 139620.0 25 0 11178.0 + 41925 VQHGVEGLTY 10 127 551.780333311366 1101.546113689532 2 551.7808105349541 MULTI CID FTMS 0 0 0 6829 182919.796875 1.0 0 0.0 2 Unmodified _VQHGVEGLTY_ ENSG00000114744|ENST00000473414|COMMD2;ENST00000463077.5_1_3:149459310-149470177:-|nuORF;ENST00000469896.1_1_3:149468461-149470237:-|nuORF;nc|ENSG00000114744|Q86X83-2|COMMD2 70.33199760932243 0.018925923965799 6 {[QV]|[N{I|L}]|[RA]|[KV]}HGVEG{I|L}TY 10 0 + 73.19 0.0 0.0 6.6443 6.6443 83.281 0.0 0.0 0.0 2.633157469082392 14.146518864155134 2.633157469082392 2.633157469082392 0 1.0 0.0 1.055462187404089 0.5010912013506126 + + {[QV]|[N{I|L}]|[RA]|[KV]}HGVEG{I|L}TY;[YT]{[SA]|[TG]}G{I|L}GG{I|L}TY;{[VA]|[{I|L}G]}GHGVEG{I|L}TY;{[HG]|PP}VAGVEG{I|L}TY;{[QV]|[N{I|L}]|[RA]|[KV]}HGVEAVTY;{[QV]|[N{I|L}]|[RA]|[KV]}HD{I|L}GG{I|L}TY;[YT]{[QS]|[NT]}{I|L}GG{I|L}TY;[YT]{[SA]|[TG]}G{I|L}GAVTY;{[QV]|[N{I|L}]|[RA]|[KV]}HREG{I|L}TY;{[HG]|PP}VQVEG{I|L}TY 6.6443;6.4053;6.2813;6.1679;6.0758;5.8604;5.8442;5.8367;5.814;5.8083 +;-;-;-;-;-;-;-;-;- + 7171 1 1.534 89591.1 0.6899999976158142 1629 5200 6829 SUDHL4_400M_050219_2,6831 SUDHL4_400M_050219_2,6831,VQHGVEGLTY True True VQHGVEGLTY 34.929868 551.780810534954 1052190.0 6829.0 nc|ENSG00000114744|Q86X83-2|COMMD2;;ENSG00000114744|ENST00000473414|COMMD2;;ENST00000469896.1_1_3:149468461-149470237:-|nuORF;;ENST00000463077.5_1_3:149459310-149470177:-|nuORF 8.066110452016195 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6832 34.944 800.0 141620.0 25 0 10381.0 + 16685 KEPEINTTL 9 148 522.7821936851517 1043.5498344371033 2 522.7822143435478 MULTI CID FTMS 0 0 0 6829 95498.6171875 1.0 0 0.0 3 Unmodified _KEPEINTTL_ ENSG00000165487|ENST00000382374|MICU2;ENST00000480341.5_1_13:22077016-22089705:-|nuORF 45.69961567697781 0.0497987121815769 6 [VG]T[EP]{I|L}NTT{I|L} 10 3 + 35.449 0.0 0.0 3.397 3.397 75.295 0.0 0.0 0.0 4.919951565663993 4.919951565663993 4.919951565663993 4.487774283020848 0 0.7429928190999391 1.5228787452803376 1.2887254899964358 0.3807196863200844 [VG]T[EP]{I|L}NTT{I|L};[VG]AQQ{I|L}NTT{I|L};[YV]AN{I|L}[HN]T{I|L};[EP]{I|L}[SG]{I|L}NTT{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP]{I|L}NTT{I|L};[VG]T[EP]{I|L}GGTT{I|L};[{I|L}A][NG]Q{I|L}NTT{I|L};[VG]AQQ{I|L}GGTT{I|L};[VG]A[AG]Q{I|L}NTT{I|L};[VG]AQ[AG]{I|L}NTT{I|L} 3.397;2.9669;2.9255;2.7154;2.5698;2.1539;2.1153;2.0887;2.0887;2.0887 -;-;-;-;+;-;-;-;-;- + 1175 1 1.534 93315.6 0.6800000071525574 1630 5200 6829 SUDHL4_400M_050219_2,6832 SUDHL4_400M_050219_2,6832,KEPEINTTL True True KEPEINTTL 34.943699 522.7851 2347120.75 6829.0 ENST00000480341.5_1_13:22077016-22089705:-|nuORF;;ENSG00000165487|ENST00000382374|MICU2 4.918441454569499 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6834 34.953 410.0 200420.0 25 0 15296.0 + 64 AVHDITVAY 9 116 494.25849599992495 986.50243906665 2 494.7595703005791 MULTI CID FTMS 0 0 0 6833 178680.703125 0.4930001745138702 4 -0.1767196655273437 1 Unmodified _AAEEGLREL_ nc|ENSG00000172954|Q6UWP7|LCLAT1;ENSG00000172954|ENST00000379509|LCLAT1 27.628801355627647 0.1796483985696185 6 AAHAT{I|L}G{I|L} 8 5 38.855 0.0 0.0 3.9386 0.0 0.0 0.0 249.06330286197505 249.06330286197505 17.885409676892934 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.7302046884880937 0.0 AAHAT{I|L}G{I|L} 3.9386 - 439 + 1 1.534 69155.3 1.0 1631 5201 6833 SUDHL4_400M_050219_2,6834 SUDHL4_400M_050219_2,6834,AAEEGLREL False True AVHDITVAY 34.953338 494.759570300579 2329643.0 6833.0 nc|ENSG00000172954|Q6UWP7|LCLAT1;;ENSG00000172954|ENST00000379509|LCLAT1 6.054399172465007 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6835 34.967 800.0 177040.0 25 0 21731.0 + -1 VTPMEVSY 8 119 471.2163540422278 940.4181551512556 2 471.2162353396416 MULTI CID FTMS 0 0 0 6833 174524.015625 0.3200715901162381 12 -0.4161109924316406 2 Oxidation (M) _VTPM(Oxidation (M))EVSY_ REV__ENSG00000162702|ENST00000367353|ZNF281;REV__nc|ENSG00000162702|Q9Y2X9-2|ZNF281 20.871210003555333 0.6025813472596342 6 VT 2 -1 35.421 0.0 0.0 3.7665 0.0 0.0 0.0 737.2794495666296 737.2794495666296 20.143509983855697 0.0 0.0 0.0 0 0.1344005005252609 0.8860566476931632 0.4247425010840047 0.0 VT 3.7665 + + 357 + 1 1.534 110793.7 0.7400000095367432 1632 5201 6833 SUDHL4_400M_050219_2,6835 SUDHL4_400M_050219_2,6835,VTPMEVSY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6836 34.981 800.0 112940.0 25 0 34728.0 + 40910 VLSELSLF 8 91 454.2620864027791 0 454.2320434451103 PEAK CID FTMS 0 0 0 6833 42685.9609375 0.3741935868275821 -6 0.1867866516113281 3 Unmodified _VLSELSLF_ REV__ENSG00000080345|ENST00000444746|RIF1;REV__nc|ENSG00000080345|Q5UIP0-2|RIF1 2.889219685676258 0.5898224805723975 6 {M(Oxidation (M))|F} 1 -1 4.6041 0.0 0.0 0.50789 0.0 0.0 453.2540215166416 303.17283044986567 756.4268519665072 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.50789 + + 22 + 1 1.534 77029.5 0.6000000238418579 1633 5201 6833 SUDHL4_400M_050219_2,6836 SUDHL4_400M_050219_2,6836,VLSELSLF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6837 34.995 800.0 86405.0 25 0 7108.6 -1 0 75 910.914947692083 1819.815342450966 2 910.9174682497978 MULTI CID FTMS 0 0 0 6833 120047.375 0.338054757514592 13 -0.4778289794921875 4 6 QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 59.051 0.0 0.0 3.2449 0.0 0.0 734.3725453107437 0.0 734.3725453107437 0.0 37.36880000633434 0.0 0.0 0 1.3494850021680094 0.0 0.0 1.110924374808178 QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.2449 - 172 1 1.534 51016.4 0.5600000023841858 1634 5201 6833 SUDHL4_400M_050219_2,6837 SUDHL4_400M_050219_2,6837, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6839 35.0 54.0 873090.0 25 0 274560.0 + 20714 LLSAEPVPA 9 59 448.75814221499 895.50173149678 2 448.7580139040947 MULTI CID FTMS 0 0 0 6838 1064565.875 0.072542646405954 11 -0.3647537231445312 1 Unmodified _LLSAEPVPA_ ENSG00000007312|ENST00000006750|CD79B;ENST00000558969.1_1_17:62008689-62009627:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B 23.1484247019978 0.2366544122328345 6 [VP]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P 6 8 21.949 0.0 0.0 2.4511 0.0 0.0 0.0 282.1490452997676 282.1490452997676 7.525749891599531 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3252574989159953 0.0 [VP]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}P 2.4511 - 111 1 1.534 41962.8 1.0 1635 5202 6838 SUDHL4_400M_050219_2,6839 SUDHL4_400M_050219_2,6839,LLSAEPVPA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6840 35.014 800.0 212400.0 25 0 22902.0 + 12081 GQFPGHNEF 9 137 516.7302584285678 1031.4459639239356 2 516.7308227419853 MULTI CID FTMS 0 0 0 6838 207545.734375 0.5387993215220582 10 -0.334930419921875 2 Unmodified _GQFPGHNEF_ ENSG00000163171|ENST00000295324|CDC42EP3 51.629811660486645 0.0367964933207742 6 {[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 7 5 53.67 0.0 0.0 5.2033 0.0 0.0 0.0 173.0819033258422 173.0819033258422 33.2120170701009 0.0 0.0 0.0 0 0.8807196863200843 0.7958800173440752 1.1861818737241734 0.6237125054200234 {[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 5.2033 - 1088 + 1 1.534 130047.5 0.7599999904632568 1636 5202 6838 SUDHL4_400M_050219_2,6840 SUDHL4_400M_050219_2,6840,GQFPGHNEF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6841 35.022 457.0 155280.0 25 0 12552.0 + 11651 GLATDVQTV 9 108 452.2428486776828 902.4711444221656 2 452.2426635622978 MULTI CID FTMS 0 0 0 6838 154983.875 0.0374594134876982 11 -0.3647537231445312 3 Unmodified _GLATDVQTV_ ENSG00000277791|ENST00000619426|PSMB3 44.40701690623563 0.0526327925666318 6 {[VA]|[{I|L}G]}AS 4 6 26.459 0.0 0.0 2.9318 0.0 0.0 0.0 571.2733959692937 571.2733959692937 5.924778212679485 0.0 0.0 0.0 0 0.0 2.0 0.2302046884880938 0.0 {[VA]|[{I|L}G]}AS 2.9318 - 284 1 1.534 58951.0 1.0 1637 5202 6838 SUDHL4_400M_050219_2,6841 SUDHL4_400M_050219_2,6841,GLATDVQTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6842 35.032 585.0 279470.0 25 0 21048.0 + 1742 ALQEVLKTA 9 149 486.7896610242418 971.5647691152836 2 486.7892944216728 MULTI CID FTMS 0 0 0 6838 109703.1875 0.3425901754308578 -2 0.0852584838867187 4 Unmodified _ALQEVLKTA_ ENSG00000112306|ENST00000230050|RPS12;ENST00000484616.2_1_6:133135907-133136327:+|nuORF 76.82478488871298 0.0184607444814265 6 [{I|L}A]QEV{I|L}KTA 9 0 + 78.066 0.0 0.0 8.0351 8.0351 92.99 0.0 0.0 0.0 48.74347886553903 17.273182404955975 17.273182404955975 9.208187539523747 0 1.3441876774005248 2.0 1.8243923658886183 0.3807196863200844 + + [{I|L}A]QEV{I|L}KTA;[{I|L}A][AG]EV{I|L}KTA;[{I|L}A]QEV[KT]{I|L}A;[{I|L}A]GAEV[KT]{I|L}A;[{I|L}A]GD{I|L}A[KT]{I|L}A;[{I|L}A]GD{I|L}K[TA]{I|L}A;AADV{I|L}A[KT]{I|L}A;[{I|L}A]GEAV[KT]{I|L}A;AADV{I|L}K[TA]{I|L}A;[{I|L}A]GEVA[KT]{I|L}A 8.0351;7.0873;4.2031;4.0745;3.9968;3.6069;3.4745;3.2278;3.0845;2.9802 +;-;-;-;-;-;-;-;-;- + 1528 + 1 1.534 125086.2 1.0 1638 5202 6838 SUDHL4_400M_050219_2,6842 SUDHL4_400M_050219_2,6842,ALQEVLKTA True True ALQEVLKTA 35.032251 486.789294421673 1593119.5 6838.0 ENSG00000112306|ENST00000230050|RPS12;;ENST00000484616.2_1_6:133135907-133136327:+|nuORF 5.019474347432454 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6844 35.037 28.0 1719200.0 25 0 142930.0 + 43540 WWWWIWWQWW 10 52 874.9037657894092 1747.7929786456184 2 874.9062377810478 MULTI CID FTMS 0 0 0 6843 1690533.125 1.0 0 0.0 1 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 {I|L}NA[QP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 14 13 75.953 0.0 0.0 4.3457 0.0 0.0 211.0957813947281 0.0 211.0957813947281 0.0 49.51290421938296 0.0 0.0 0 1.25 0.0 0.0 0.805462187404089 {I|L}NA[QP]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.3457 - 580 1 1.534 38169.0 1.0 1639 5203 6843 SUDHL4_400M_050219_2,6844 SUDHL4_400M_050219_2,6844,WWWWIWWQWW False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 6845 35.04 146.0 282270.0 25 0 36233.0 14668 IIPGGIYDA 9 60 459.7491399470667 917.4837269609334 2 459.7490417361259 MULTI CID FTMS 0 0 0 6843 180282.34375 0.0324481705349855 9 -0.2975196838378906 2 Unmodified _IIPGGIYDA_ ENSG00000101441|ENST00000217423|CST4 12.531546534597751 0.4974689918368763 6 {I|L}{I|L}[TA]D 5 6 21.254 0.0 0.0 2.3166 0.0 0.0 0.0 401.1805819147094 401.1805819147094 4.019089853900226 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.0 0.0 {I|L}{I|L}[TA]D 2.3166 - 49 + 1 1.534 37245.8 1.0 1640 5203 6843 SUDHL4_400M_050219_2,6845 SUDHL4_400M_050219_2,6845,IIPGGIYDA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6846 35.046 344.0 282230.0 25 0 36715.0 + -1 SHVAVENALG 10 106 519.7639421947683 1037.5133314563366 2 519.7645751833916 MULTI CID FTMS 0 0 0 6843 184634.8125 0.4569579048742783 -3 0.1226692199707031 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))SHVAVENALG_ ENST00000480592.5_1_X:41193505-41196960:+|nuORF;nc|ENSG00000215301|O00571-2|DDX3X;ENSG00000215301|ENST00000644876|DDX3X 24.99096001346401 0.4071966087057876 6 {[YC]|[HE]}VAVENA{[VA]|[{I|L}G]} 10 -1 + 63.606 0.0 0.0 6.1306 6.1306 87.768 0.0 0.0 0.0 18.964687239169606 50.11107503885448 18.964687239169606 9.164539485499256 0 0.5 1.0457574905606752 0.2742275032520141 0.0 {[YC]|[HE]}VAVENA{[VA]|[{I|L}G]};{[YC]|[HE]}VAVEGGA{[VA]|[{I|L}G]};{[YC]|[HE]}VAV{[QG]|[NA]}E{[VA]|[{I|L}G]};{[YC]|[HE]}V[PG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A{[VA]|[{I|L}G]};[{I|L}A][HD]VENA{[VA]|[{I|L}G]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}NEV[{M(Oxidation (M))|F}T]{[VA]|[{I|L}G]};{[YC]|[HE]}[RP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}A{[VA]|[{I|L}G]};{[YC]|[HE]}VA{[{M(Oxidation (M))|F}H]|[RQ]}[W{I|L}];[{I|L}A][HD]VEGGA{[VA]|[{I|L}G]};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}GGEV[{M(Oxidation (M))|F}T]{[VA]|[{I|L}G]} 6.1306;5.2473;4.3233;3.2377;3.0987;3.0018;2.6081;2.5874;2.2154;2.1143 -;-;-;-;-;-;-;-;-;- 226 1 1.534 77100.8 1.0 1641 5203 6843 SUDHL4_400M_050219_2,6846 SUDHL4_400M_050219_2,6846,SHVAVENALG False False SHVAVENALG 35.046197 519.764575183392 1985047.5 6843.0 ENST00000480592.5_1_X:41193505-41196960:+|nuORF;;nc|ENSG00000215301|O00571-2|DDX3X;;ENSG00000215301|ENST00000644876|DDX3X 7.884905656178792 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6847 35.051 249.0 176830.0 25 0 15539.0 + 10101 FPTSQRLPA 9 80 508.77988973047206 1015.545226527744 2 508.7799865603447 MULTI CID FTMS 0 0 0 6843 185016.625 0.3753592220009717 33 -0.9106292724609376 4 Unmodified _FPTSQRLPA_ ENST00000399831.7_1_8:38965091-38975631:+|nuORF 24.020572477871973 0.2255576514309169 6 GTPE 4 7 41.414 0.0 0.0 4.078 0.0 0.0 613.3502064435562 0.0 613.3502064435562 0.0 27.91956270212445 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.0 GTPE 4.078 - 55 1 1.534 43859.2 1.0 1642 5203 6843 SUDHL4_400M_050219_2,6847 SUDHL4_400M_050219_2,6847,FPTSQRLPA False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6848 35.065 800.0 136220.0 25 0 8625.8 -1 0 101 881.9128141677324 1761.8110754022648 2 882.4133788943291 MULTI CID FTMS 0 0 0 6843 123915.2890625 0.1896879494893772 -11 0.3150138854980469 5 6 [NP]{I|L}[TP][DP]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 62.934 0.0 0.0 3.5721 3.5721 75.608 0.0 0.0 0.0 4.894549897933871 16.59978285093395 4.894549897933871 4.151603310239906 0 1.3807196863200843 0.958607314841775 0.3807196863200844 0.3494850021680094 [NP]{I|L}[TP][DP]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NE[HQ]{[ET]|[MV]}N{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}GRQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[{M(Oxidation (M))|F}H]|[RQ]}RQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NE[QP]A[QA]N{I|L}DV[HC];[NP]{I|L}NE[QP]G{[NV]|[RG]}N{I|L}DV[HC];[NP]{I|L}NE[QP]G{[NV]|[RG]}NPMV[HC];{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}GR[AG]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}GRQAEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}G[VG]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.5721;3.3365;2.973;2.935;2.8191;2.7185;2.4926;2.4604;2.4604;2.4604 -;-;-;-;-;-;-;-;-;- 2395 1 1.534 77304.7 0.4900000095367431 1643 5203 6843 SUDHL4_400M_050219_2,6848 SUDHL4_400M_050219_2,6848, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6849 35.073 482.0 148100.0 25 0 11865.0 + 24019 LVYEGQLSQA 10 109 554.288149545459 1106.5617461577178 2 554.2897216677666 MULTI CID FTMS 0 0 0 6843 122591.4140625 0.9471099739244044 -4 0.1657638549804687 6 Unmodified _LVYEGQLSQA_ nc|ENSG00000288701|Q5JSZ5-2|PRRC2B;nc|ENSG00000288701|Q5JSZ5-3|PRRC2B;nc|ENSG00000288701|Q5JSZ5-4|PRRC2B;nc|ENSG00000288701|Q5JSZ5-5|PRRC2B;nc|ENSG00000288701|Q5JSZ5|PRRC2B 39.94969957227396 0.1580982266129622 6 [{I|L}V]YE{[QG]|[NA]}{I|L} 7 3 36.496 0.0 0.0 3.2982 0.0 0.0 0.0 301.1168358396116 301.1168358396116 18.215430937556857 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.4247425010840047 0.0 + [{I|L}V]YE{[QG]|[NA]}{I|L} 3.2982 + + 614 1 1.534 63268.1 1.0 1644 5203 6843 SUDHL4_400M_050219_2,6849 SUDHL4_400M_050219_2,6849,LVYEGQLSQA False True LVYEGQLSQA 35.073207 554.289721667767 930643.0625 6843.0 nc|ENSG00000288701|Q5JSZ5-5|PRRC2B;;nc|ENSG00000288701|Q5JSZ5|PRRC2B;;nc|ENSG00000288701|Q5JSZ5-2|PRRC2B;;nc|ENSG00000288701|Q5JSZ5-4|PRRC2B;;nc|ENSG00000288701|Q5JSZ5-3|PRRC2B 6.236567656199138 2.0 True 10.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 6850 35.078 256.0 225440.0 25 0 18411.0 + -1 IMRAGMSSL 9 111 499.2420870360386 996.4696211388772 2 499.2421752810478 MULTI CID FTMS 0 0 0 6843 111214.84375 0.4132211493524717 -3 0.1226692199707031 7 2 Oxidation (M) _IM(Oxidation (M))RAGM(Oxidation (M))SSL_ nc|ENSG00000132141|Q92526-3|CCT6B;ENSG00000146731|ENST00000275603|CCT6A;ENSG00000132141|ENST00000314144|CCT6B;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000146731|P40227-2|CCT6A;ENST00000466479.1_1_7:56130338-56130775:+|nuORF 32.78568957990786 0.1150597335874693 6 {I|L}{M(Oxidation (M))|F}SM{[WN]|[YH]}S{I|L} 8 -1 + 39.532 0.0 0.0 3.9672 3.9672 74.211 0.0 0.0 0.0 13.082049329337972 2.047509540478032 2.047509540478032 2.047509540478032 0 0.4361818737241735 0.0 0.3054621874040891 0.0 {I|L}{M(Oxidation (M))|F}SM{[WN]|[YH]}S{I|L};{I|L}{M(Oxidation (M))|F}SM[H{I|L}]SY;{[MS]|[{M(Oxidation (M))|F}A]}S{I|L}[Y{M(Oxidation (M))|F}]SY;{I|L}{M(Oxidation (M))|F}S[NS]{[ET]|[MV]}S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}S{M(Oxidation (M))|F}QTPS{I|L};{I|L}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]{[ET]|[MV]}S{I|L};[{I|L}P]{[C(Carbamidomethyl (C))E]|[WC]}KSTY;[HV]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[PS]PS{I|L};{[NV]|[RG]}{[RE]|[WV]}ETSY;{[NV]|[RG]}[HQ]{[WN]|[YH]}S{I|L} 3.9672;3.7617;2.4003;2.2568;2.183;1.6067;1.5031;1.44;1.4153;1.3981 -;-;-;-;-;-;-;-;-;- 568 + 1 1.534 47344.8 1.0 1645 5203 6843 SUDHL4_400M_050219_2,6850 SUDHL4_400M_050219_2,6850,IMRAGMSSL False False IMRAGMSSL 35.077955 499.242175281048 1038680.75 6843.0 nc|ENSG00000132141|Q92526-3|CCT6B;;ENSG00000146731|ENST00000275603|CCT6A;;ENSG00000132141|ENST00000314144|CCT6B;;nc|ENSG00000132141|Q92526-2|CCT6B;;nc|ENSG00000146731|P40227-2|CCT6A;;ENST00000466479.1_1_7:56130338-56130775:+|nuORF 4.570407787958781 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6851 35.092 800.0 148790.0 25 0 11994.0 + -1 AEQRMNSYYDQ 11 115 710.7913336760942 1419.5681144189882 2 711.2909423708916 MULTI CID FTMS 0 0 0 6843 97146.25 0.782653662889032 -7 0.2607688903808594 8 Oxidation (M) _AEQRM(Oxidation (M))NSYYDQ_ REV__ENSG00000155636|ENST00000286070|RBM45;REV__ENST00000424000.6_1_2:178977216-178988379:+|nuORF;REV__nc|ENSG00000155636|Q8IUH3-2|RBM45;REV__nc|ENSG00000155636|Q8IUH3|RBM45 10.150570793230772 0.8240029794358671 6 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 61.208 0.0 0.0 4.3117 0.0 0.0 335.1215992658219 0.0 335.1215992658219 0.0 36.3088744268984 0.0 0.0 0 0.8935078169319297 0.0 0.3054621874040891 0.8494850021680094 DEAQQNA{M(Oxidation (M))|F}Y 4.3117 - 623 1 1.534 87894.9 0.4699999988079071 1646 5203 6843 SUDHL4_400M_050219_2,6851 SUDHL4_400M_050219_2,6851,AEQRMNSYYDQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6853 35.101 311.0 177160.0 25 0 12616.0 + 40493 VIRDVEQQF 9 90 567.3009587994432 1132.5873646656862 2 567.3007079958916 MULTI CID FTMS 0 0 0 6852 178856.359375 0.2173017520431872 3 -0.0870819091796875 1 Unmodified _VIRDVEQQF_ ENSG00000076003|ENST00000264156|MCM6 40.23920728925047 0.0741434193262949 6 [{I|L}V]RDVEQQ{M(Oxidation (M))|F} 9 0 + 71.393 0.0 0.0 6.3035 6.3035 89.195 0.0 0.0 0.0 20.6424927368726 43.244171855527966 20.6424927368726 9.208187539523747 0 1.1549471895720984 1.6989700043360187 0.0 0.0 + + [{I|L}V]RDVEQQ{M(Oxidation (M))|F};[{I|L}V]RDVE[AG]Q{M(Oxidation (M))|F};[{I|L}V]RDVEQ[AG]{M(Oxidation (M))|F};[{I|L}V]RD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VQ{M(Oxidation (M))|F};[{I|L}V]RDVE[AG][AG]{M(Oxidation (M))|F};[{I|L}V]RD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[AG]{M(Oxidation (M))|F} 6.3035;5.4905;5.4905;4.7582;4.6813;3.9452 +;-;-;-;-;- + 223 1 1.534 46584.0 1.0 1647 5204 6852 SUDHL4_400M_050219_2,6853 SUDHL4_400M_050219_2,6853,VIRDVEQQF True True VIRDVEQQF 35.101344 567.300707995892 9332243.0 6852.0 ENSG00000076003|ENST00000264156|MCM6 6.771762053171794 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6854 35.112 625.0 181130.0 25 0 29846.0 + 14648 IILDEAHNV 9 128 512.2770927628732 1022.5396325925464 2 512.2781860232353 MULTI CID FTMS 0 0 0 6852 137173.171875 0.3551617595014076 -4 0.1822090148925781 2 Unmodified _IILDEAHNV_ ENSG00000116830|ENST00000369466|TTF2 53.832793166522166 0.0319663582346103 6 {I|L}{I|L}{I|L}DEAHNV 9 0 + 86.063 0.0 0.0 8.4166 8.4166 84.052 0.0 0.0 0.0 63.08234162339977 15.96476027392113 15.96476027392113 0.853232939203096 0 0.4247425010840047 2.0 0.6421590589602533 0.7134679910804405 + + {I|L}{I|L}{I|L}DEAHNV;{I|L}{I|L}VEEAHNV;{I|L}{I|L}{I|L}DEAHGGV;{I|L}{I|L}{I|L}DEQHGV;{I|L}{I|L}VEEQHGV;{I|L}{I|L}{I|L}DE[HN]AV;{I|L}{I|L}VEEAHGGV;{I|L}{I|L}VEE[HN]AV;{I|L}{I|L}{I|L}DE[HN]G{I|L};{I|L}{I|L}VEE[HN]G{I|L} 8.4166;8.3332;7.0448;7.006;6.9225;6.9015;6.8714;6.8181;6.412;6.3285 +;-;-;-;-;-;-;-;-;- + 1036 + 1 1.534 89617.8 1.0 1648 5204 6852 SUDHL4_400M_050219_2,6854 SUDHL4_400M_050219_2,6854,IILDEAHNV True True IILDEAHNV 35.112261 512.278186023235 1714725.0 6852.0 ENSG00000116830|ENST00000369466|TTF2 6.027492523193359 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6855 35.12 446.0 203810.0 25 0 11778.0 -1 NQVMLQMTESH 11 111 675.2966727294859 1348.5787925257716 2 675.2978393435478 MULTI CID FTMS 0 0 0 6852 128408.484375 0.9000789554183909 -1 0.059539794921875 3 2 Oxidation (M) _NQVM(Oxidation (M))LQM(Oxidation (M))TESH_ ENST00000471947.1_1_2:55633152-55646215:-|nuORF 8.155526934196011 0.8366696279279818 6 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQNA{[CA]|SS} 14 -1 + 74.99 0.0 0.0 5.5606 5.5606 84.088 0.0 0.0 0.0 7.733326444784296 7.569619513137042 7.569619513137042 6.712175127047246 0 0.5 0.958607314841775 0.0 1.9291746928241125 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQNA{[CA]|SS};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQQNA{[CA]|SS};{[QN]|[E{I|L}]|[KN]}A{[DS]|[MA]|[CV]|TT}EAQQNA{[CA]|SS};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQGGA{[CA]|SS};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQ[AG]NA{[CA]|SS};{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EA[AG]QNA{[CA]|SS};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}EAQQNA{[CA]|SS};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQ[AG]NA{[CA]|SS};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EA[AG]QNA{[CA]|SS};{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQQGGA{[CA]|SS} 5.5606;5.0629;4.9872;4.8895;4.8895;4.8895;4.4587;4.3902;4.3902;4.3902 -;-;-;-;-;-;-;-;-;- 997 1 1.534 74961.4 1.0 1649 5204 6852 SUDHL4_400M_050219_2,6855 SUDHL4_400M_050219_2,6855,NQVMLQMTESH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6857 35.125 24.0 1804300.0 25 0 189690.0 + 38350 TQMPDPKTF 9 64 540.7550312532467 1079.4955095732932 2 540.7552368044853 MULTI CID FTMS 0 0 0 6856 2248674.0 0.8445857174085 2 -0.0586700439453125 1 Oxidation (M) _TQM(Oxidation (M))PDPKTF_ ENSG00000120963|ENST00000311212|ZNF706 49.52724829834842 0.0414064571532091 6 [QT]{M(Oxidation (M))|F}PDPKT{M(Oxidation (M))|F} 9 0 + 56.794 0.0 0.0 5.2611 5.2611 90.099 0.0 0.0 0.0 43.605925060534574 12.587418566968154 12.587418566968154 31.441387883238075 0 1.3494850021680094 0.0 0.4247425010840047 0.0 + + [QT]{M(Oxidation (M))|F}PDPKT{M(Oxidation (M))|F};[KP]T{M(Oxidation (M))|F}{[ET]|[MV]}{M(Oxidation (M))|F}[NP];[KP][DP]T[{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[DP][KP]T[{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[KP]T[DP][{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 5.2611;2.3485;0.42847;0.41252;0.26534 +;-;-;-;- + 119 + 1 1.534 42257.8 1.0 1650 5205 6856 SUDHL4_400M_050219_2,6857 SUDHL4_400M_050219_2,6857,TQMPDPKTF True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6858 35.128 146.0 426290.0 25 0 35311.0 -1 MDNITRQNQFY 11 67 744.3295021326318 1486.6444513320637 2 744.3312866091728 MULTI CID FTMS 0 0 0 6856 343815.59375 0.3395784400927847 3 -0.0902023315429687 2 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))DNITRQNQFY_ ENSG00000105323|ENST00000392006|HNRNPUL1;ENST00000594207.1_1_19:41774132-41786840:+|nuORF;nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1;nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1 8.745405648335112 0.8338865417133445 6 HDEAQQNA{M(Oxidation (M))|F}Y 10 -1 63.819 0.0 0.0 4.2928 0.0 0.0 265.14180190254064 0.0 265.14180190254064 0.0 47.8321441351563 0.0 0.0 0 0.718765315847925 0.0 0.0 0.8494850021680094 HDEAQQNA{M(Oxidation (M))|F}Y 4.2928 - 629 1 1.534 51909.0 1.0 1651 5205 6856 SUDHL4_400M_050219_2,6858 SUDHL4_400M_050219_2,6858,MDNITRQNQFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6859 35.142 800.0 71149.0 25 0 20127.0 -1 0 30 1197.156876795893 3588.4488009878783 3 1197.825732409954 MULTI CID FTMS 0 0 0 6856 135217.484375 0.7089368411972347 -2 0.08795166015625 3 6 E 1 -1 6.9897 0.0 0.0 0.19478 0.0 0.0 2932.22193823542 524.1639498346311 3456.385888070052 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19478 - 11 + 1 1.534 56416.0 0.4099999964237213 1652 5205 6856 SUDHL4_400M_050219_2,6859 SUDHL4_400M_050219_2,6859, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6861 35.158 800.0 57262.0 25 0 8230.5 + 43545 WWWWIWWQWW 10 70 583.6055332233767 1747.79477027033 3 583.6061279177666 MULTI CID FTMS 0 0 0 6860 36897.90234375 0.4931175536002958 1 -0.0370521545410156 1 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 {I|L}Q 2 8 26.083 0.0 0.0 1.4924 0.0 0.0 1488.641921004508 0.0 1488.641921004508 0.0 20.598943791441968 0.0 0.0 0 0.0 0.0 0.0 0.75 {I|L}Q 1.4924 - 59 + 1 1.534 40441.6 0.449999988079071 1653 5206 6860 SUDHL4_400M_050219_2,6861 SUDHL4_400M_050219_2,6861,WWWWIWWQWW False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 6862 35.165 382.0 148930.0 25 0 12399.0 164 AALSSVLAGL 10 104 451.2709731873805 900.527393441561 2 451.2704955935478 MULTI CID FTMS 0 0 0 6860 100239.3125 1.0 0 0.0 2 Unmodified _AALSSVLAGL_ ENSG00000165349|ENST00000374299|SLC7A3 26.88365393820708 0.3646707531412818 6 AA{I|L}D 4 7 29.675 0.0 0.0 3.2953 0.0 0.0 0.0 527.3203219049436 527.3203219049436 11.133308418411652 0.0 0.0 0.0 0 0.3494850021680094 1.3979400086720375 0.5 0.0 AA{I|L}D 3.2953 - 621 + 1 1.534 50798.1 1.0 1654 5206 6860 SUDHL4_400M_050219_2,6862 SUDHL4_400M_050219_2,6862,AALSSVLAGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6863 35.179 800.0 71073.0 25 0 7590.1 + 9249 KQMEDGHTLF 10 96 407.8567681352198 1220.5484750058597 3 407.8569213747978 MULTI CID FTMS 0 0 0 6860 77112.1640625 1.0 0 0.0 3 Unmodified _FHEREDLEF_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;UHRF1-KDM4B|2|fusion;UHRF1-KDM4B|1|fusion;nc|ENSG00000276043|Q96T88-2|UHRF1;ENSG00000276043|ENST00000650932|UHRF1 4.897010918128616 0.7437319958283661 6 {M(Oxidation (M))|F} 1 8 15.485 0.0 0.0 1.2687 0.0 0.0 1055.4693409499985 0.0 1055.4693409499985 0.0 5.951658490851459 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.2687 + + 30 + 1 1.534 50554.3 0.3600000143051147 1655 5206 6860 SUDHL4_400M_050219_2,6863 SUDHL4_400M_050219_2,6863,FHEREDLEF False False KQMEDGHTLF 35.178864 407.856921374798 451009.6875 6860.0 chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;;UHRF1-KDM4B|2|fusion;;UHRF1-KDM4B|1|fusion;;nc|ENSG00000276043|Q96T88-2|UHRF1;;ENSG00000276043|ENST00000650932|UHRF1 -0.2369746367136637 3.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6865 35.197 800.0 107920.0 25 0 15764.0 + 17271 KLPEKWESV 9 107 558.3085468424849 1114.6025407517698 2 558.3090698122978 MULTI CID FTMS 0 0 0 6864 75497.2265625 0.089771594614636 11 -0.4401702880859375 1 Unmodified _KLPEKWESV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 29.84058131909904 0.1515068451768857 6 [EP]KWESV[K{I|L}] 9 4 + 31.889 0.0 0.0 2.861 2.861 75.09 0.0 0.0 0.0 1.7517364849543815 5.585908507588759 1.7517364849543815 5.347725134586266 0 0.0 0.0 0.3807196863200844 0.0 [EP]KWESV[K{I|L}];[K{I|L}]PEE[WK]SV;[EP]K{I|L}EC(Carbamidomethyl (C))V[K{I|L}];[K{I|L}]PEEC(Carbamidomethyl (C))V[K{I|L}];[K{I|L}][YN]E[RH]R;[VS][PA]WESV[K{I|L}];[K{I|L}]PE[KT][WD]V;[EP]KWE[K{I|L}][VS];[K{I|L}][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]V[RH][VG];[VS][PA]{I|L}EC(Carbamidomethyl (C))V[K{I|L}] 2.861;2.3813;2.207;2.1636;1.9394;1.5658;1.3714;1.2909;0.9504;0.91177 -;-;-;-;-;-;-;-;-;- 258 1 1.534 67603.4 0.550000011920929 1656 5207 6864 SUDHL4_400M_050219_2,6865 SUDHL4_400M_050219_2,6865,KLPEKWESV False True KLPEKWESV 35.196568 558.309069812298 18418306.5 6864.0 ENSG00000171490|ENST00000571133|RSL1D1;;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;;nc|ENSG00000171490|O76021-2|RSL1D1;;ENST00000574823.5_1_16:11935494-11935832:-|nuORF 5.392081101735433 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6866 35.21 800.0 150270.0 25 0 21435.0 + 1514 ALIEDEHNL 9 153 527.2630761697768 1052.5115994063535 2 527.2628661990166 MULTI CID FTMS 0 0 0 6864 86255.421875 0.9394591523054316 -2 0.0586700439453125 2 Unmodified _ALIEDEHNL_ ENSG00000175455|ENST00000409697|CCDC14;nc|ENSG00000175455|Q49A88-2|CCDC14;nc|ENSG00000175455|Q49A88-3|CCDC14;nc|ENSG00000175455|Q49A88-5|CCDC14;nc|ENSG00000175455|Q49A88-6|CCDC14;nc|ENSG00000175455|Q49A88|CCDC14 56.17704186161178 0.0281986971544335 6 [{I|L}A]{I|L}EDENH{I|L} 9 2 + 73.904 0.0 0.0 7.0217 7.0217 82.703 0.0 0.0 0.0 27.147642715192504 6.220454731232749 6.220454731232749 1.582881799615933 0 0.6549471895720985 2.0 0.6643943297944485 0.7302046884880937 [{I|L}A]{I|L}EDENH{I|L};[{I|L}A]{I|L}EDEHN{I|L};[{I|L}A]{I|L}EDEHQV;[{I|L}A]{I|L}EDEGGH{I|L};[{I|L}A]{I|L}EDEHGG{I|L};[{I|L}A]{I|L}ED[QT]TY;[{I|L}A]{I|L}[DN]{M(Oxidation (M))|F}PTY;[{I|L}A]{I|L}[DN]EEH{I|L};[{I|L}A]{I|L}EDEH[AG]V;[{I|L}A]{I|L}[DN]{M(Oxidation (M))|F}[YT]P 7.0217;6.8713;6.4307;5.453;5.0749;5.0039;4.9034;4.6694;4.6343;4.1021 -;+;-;-;-;-;-;-;-;- + 758 + 1 1.534 95460.5 0.4600000083446502 1657 5207 6864 SUDHL4_400M_050219_2,6866 SUDHL4_400M_050219_2,6866,ALIEDEHNL True True ALIEDEHNL 35.2104 527.262866199017 316314.3125 6864.0 nc|ENSG00000175455|Q49A88-3|CCDC14;;nc|ENSG00000175455|Q49A88-2|CCDC14;;nc|ENSG00000175455|Q49A88-5|CCDC14;;nc|ENSG00000175455|Q49A88|CCDC14;;ENSG00000175455|ENST00000409697|CCDC14;;nc|ENSG00000175455|Q49A88-6|CCDC14 6.447177886962891 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6869 35.22 141.0 342270.0 25 0 20063.0 + 13684 HQGPVPLSY 9 100 499.26015715785775 996.5057613825156 2 499.2591125369072 MULTI CID FTMS 0 0 0 6868 160684.046875 0.6466027100554541 -2 0.0355911254882812 1 Unmodified _HQGPVPLSY_ ENSG00000146083|ENST00000274811|RNF44;nc|ENSG00000146083|Q7L0R7-2|RNF44 23.78978130925829 0.2284941198415988 6 M[H{I|L}]SY 5 6 28.913 0.0 0.0 2.9014 0.0 0.0 347.18954614285286 0.0 347.18954614285286 0.0 4.247176814198266 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 M[H{I|L}]SY 2.9014 - 253 + 1 1.534 40836.1 1.0 1658 5209 6868 SUDHL4_400M_050219_2,6869 SUDHL4_400M_050219_2,6869,HQGPVPLSY False True HQGPVPLSY 35.219847 499.259112536907 1426511.5 6868.0 ENSG00000146083|ENST00000274811|RNF44;;nc|ENSG00000146083|Q7L0R7-2|RNF44 6.633314609527588 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6870 35.225 270.0 207790.0 25 0 37911.0 + 20238 LLDEPTNHL 9 81 526.2742924319465 1050.534031930693 2 526.2744018435478 MULTI CID FTMS 0 0 0 6868 127448.578125 0.2374627592008529 -4 0.0942611694335937 2 Unmodified _LLDEPTNHL_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 60.07390631473393 0.0260411565414776 6 {I|L}{I|L}DEPTN[H{I|L}] 9 0 + 81.635 0.0 0.0 7.7708 7.7708 95.579 0.0 0.0 0.0 74.64509699961575 5.642492736872597 5.642492736872597 17.26280941356464 0 0.8494850021680094 2.0 0.8252574989159953 0.805462187404089 + + {I|L}{I|L}DEPTN[H{I|L}];{I|L}{I|L}DEPTGG[H{I|L}];{I|L}[{M(Oxidation (M))|F}V][HA]TN[H{I|L}] 7.7708;6.1275;1.6126 +;-;- + 103 + 1 1.534 50587.4 1.0 1659 5209 6868 SUDHL4_400M_050219_2,6870 SUDHL4_400M_050219_2,6870,LLDEPTNHL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6871 35.239 800.0 138900.0 25 0 13018.0 + 1291 AIQPGSINY 9 124 481.7511069816044 961.4876610300088 2 481.7504455447197 MULTI CID FTMS 0 0 0 6868 118409.921875 0.9503218899257152 -1 0.004058837890625 3 Unmodified _AIQPGSINY_ ENSG00000136167|ENST00000323076|LCP1;nc|ENSG00000136167|P13796-2|LCP1 32.30548876998284 0.1201446275138228 6 [{I|L}A][HD]VNE 7 6 33.204 0.0 0.0 3.4534 0.0 0.0 0.0 180.10470139549628 180.10470139549628 10.980910146099774 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}A][HD]VNE 3.4534 - 510 1 1.534 87307.8 0.5299999713897705 1660 5209 6868 SUDHL4_400M_050219_2,6871 SUDHL4_400M_050219_2,6871,AIQPGSINY True True AIQPGSINY 35.238653 481.75044554472 596235.5 6868.0 ENSG00000136167|ENST00000323076|LCP1;;nc|ENSG00000136167|P13796-2|LCP1 4.41779104868571 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6872 35.243 254.0 176240.0 25 0 26148.0 + 18634 LAGDLQQK 8 61 436.7454150814417 871.4762772296833 2 436.7455627322197 MULTI CID FTMS 0 0 0 6868 113156.0390625 0.7312067549009976 -1 0.004058837890625 4 Unmodified _LAGDLQQK_ REV__ENSG00000151914|ENST00000680361|DST;REV__nc|ENSG00000151914|Q03001-14|DST;REV__nc|ENSG00000151914|Q03001-8|DST;REV__nc|ENSG00000151914|Q03001|DST 24.67388899826682 0.525179942228231 6 [{I|L}A]G 3 -1 28.557 0.0 0.0 3.2768 0.0 0.0 0.0 627.3104654223192 627.3104654223192 16.584121314236064 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 [{I|L}A]G 3.2768 + + 42 1 1.534 41393.1 1.0 1661 5209 6868 SUDHL4_400M_050219_2,6872 SUDHL4_400M_050219_2,6872,LAGDLQQK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6874 35.257 613.0 193210.0 25 0 24578.0 + 16960 KIPPVSPSI 9 142 469.2900744701825 936.565596007165 2 469.2898742556572 MULTI CID FTMS 0 0 0 6873 107020.171875 0.9547209145528328 1 -0.0368995666503906 1 Unmodified _KIPPVSPSI_ ENSG00000113369|ENST00000265138|ARRDC3 62.57269311338072 0.0246576765497938 6 [PS]VP[K{I|L}]SP{I|L} 9 6 + 39.116 0.0 0.0 4.1766 4.1766 80.39 0.0 0.0 0.0 1.029895806251119 15.88064856211258 1.029895806251119 8.195217787905666 0 1.1549471895720984 0.8860566476931632 0.6989700043360187 0.3054621874040891 [PS]VP[K{I|L}]SP{I|L};[PS]VP[PS]{I|L}K{I|L};[VS]PP[K{I|L}]SP{I|L};{[HG]|PP}VS[K{I|L}]SP{I|L};[VS]PP[PS]{I|L}K{I|L};[VG]VP[DP]{I|L}K{I|L};{[HG]|PP}V[K{I|L}]SSP{I|L};{[HG]|PP}VS[PS]{I|L}K{I|L};[K{I|L}][RH][RD]{I|L};[VG]VP[K{I|L}]DP{I|L} 4.1766;3.3016;3.3008;2.8928;2.4257;2.3024;2.25;2.0178;1.4493;1.3014 -;-;-;-;-;-;-;-;-;- 517 1 1.534 97567.1 1.0 1662 5210 6873 SUDHL4_400M_050219_2,6874 SUDHL4_400M_050219_2,6874,KIPPVSPSI True True KIPPVSPSI 35.256608 469.289874255657 678641.875 6873.0 ENSG00000113369|ENST00000265138|ARRDC3 5.682085831960042 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6875 35.261 214.0 357510.0 25 0 108130.0 + 20706 LLSAAEPVPA 10 94 484.276416737616 966.538280542032 2 484.2763244509697 MULTI CID FTMS 0 0 0 6873 282876.34375 0.1256515750014186 -4 0.1015548706054687 2 Unmodified _LLSAAEPVPA_ nc|ENSG00000007312|P40259-3|CD79B 46.020951573049366 0.1035046897853725 6 [VP]{I|L}{[CA]|SS}TP 7 8 29.174 0.0 0.0 3.0184 0.0 0.0 0.0 282.1450059661133 282.1450059661133 10.51132112525204 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.8494850021680094 0.0 [VP]{I|L}{[CA]|SS}TP 3.0184 - 649 1 1.534 66005.8 1.0 1663 5210 6873 SUDHL4_400M_050219_2,6875 SUDHL4_400M_050219_2,6875,LLSAAEPVPA True True LLSAAEPVPA 35.260664 484.27632445097 10706165.0 6873.0 nc|ENSG00000007312|P40259-3|CD79B 4.69867753982544 2.0 True 10.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 6876 35.269 500.0 135340.0 25 0 17953.0 + 30494 REEVEAVTI 9 119 523.2803127879588 1044.5460726427175 2 523.2802001833916 MULTI CID FTMS 0 0 0 6873 98382.84375 0.8356450095127335 -1 0.0289115905761718 3 Unmodified _REEVEAVTI_ ENSG00000140986|ENST00000268661|RPL3L 36.12702656103203 0.0967173616627612 6 {NN|[MP]|[D{I|L}]|[EV]}WV{I|L}WT{I|L} 8 5 + 59.365 0.0 0.0 5.6833 5.6833 83.293 0.0 0.0 0.0 15.970325397914564 7.697953115119063 7.697953115119063 5.327059689071518 0 1.3182503180159344 1.0969100130080565 0.9802046884880936 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}WV{I|L}WT{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADV{I|L}WT{I|L};{NN|[MP]|[D{I|L}]|[EV]}WV{I|L}T[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}WV{I|L}{[DA]|[EG]}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}WVT{I|L}[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}ADV{I|L}T[W{I|L}];{NN|[MP]|[D{I|L}]|[EV]}WV[VP]CT{I|L};{NN|[MP]|[D{I|L}]|[EV]}WVT[TP]T{I|L};{NN|[MP]|[D{I|L}]|[EV]}ADV{I|L}{[DA]|[EG]}T{I|L};{[SA]|[TG]}QQV{I|L}WT{I|L} 5.6833;5.1733;4.9463;4.7966;4.4664;4.4364;4.3166;4.3166;4.2918;4.1544 -;-;-;-;-;-;-;-;-;- 551 1 1.534 57275.6 1.0 1664 5210 6873 SUDHL4_400M_050219_2,6876 SUDHL4_400M_050219_2,6876,REEVEAVTI True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6877 35.28 617.0 118530.0 25 0 16515.0 + 33794 SLDDHVVAV 9 106 477.7480543924312 953.4815558516624 2 477.7482787966728 MULTI CID FTMS 0 0 0 6873 89836.921875 1.0 0 0.0 4 Unmodified _SLDDHVVAV_ ENSG00000184465|ENST00000448612|WDR27;ENST00000464249.1_1_6:170068797-170070787:-|nuORF;ENST00000496752.1_1_6:170065563-170070787:-|nuORF;ENST00000546953.1_1_6:170070523-170070838:-|nuORF;nc|ENSG00000184465|A2RRH5|WDR27 28.486842064014134 0.1687311288560894 6 VTVVG{I|L} 6 7 25.754 0.0 0.0 2.7011 0.0 0.0 367.1124745099625 0.0 367.1124745099625 0.0 11.14999878129387 0.0 0.0 0 0.4876954943324545 0.0 0.3252574989159953 0.0 VTVVG{I|L} 2.7011 - 143 1 1.534 60360.6 1.0 1665 5210 6873 SUDHL4_400M_050219_2,6877 SUDHL4_400M_050219_2,6877,SLDDHVVAV False True SLDDHVVAV 35.280256 477.748278796673 457322.09375 6873.0 ENST00000546953.1_1_6:170070523-170070838:-|nuORF;;nc|ENSG00000184465|A2RRH5|WDR27;;ENST00000496752.1_1_6:170065563-170070787:-|nuORF;;ENSG00000184465|ENST00000448612|WDR27;;ENST00000464249.1_1_6:170068797-170070787:-|nuORF 6.423364957173665 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6879 35.289 237.0 226990.0 25 0 58199.0 + 20315 LLESAPVPA 9 78 448.75814221499 895.50173149678 2 448.7579223513603 MULTI CID FTMS 0 0 0 6878 233718.546875 0.0159262684467192 20 -0.5820808410644531 1 Unmodified _LLESAPVPA_ REV__ENSG00000178209|ENST00000345136|PLEC;REV__nc|ENSG00000178209|Q15149-2|PLEC;REV__nc|ENSG00000178209|Q15149-3|PLEC;REV__nc|ENSG00000178209|Q15149-5|PLEC;REV__nc|ENSG00000178209|Q15149-6|PLEC;REV__nc|ENSG00000178209|Q15149-7|PLEC;REV__nc|ENSG00000178209|Q15149-8|PLEC;REV__nc|ENSG00000178209|Q15149-9|PLEC;REV__nc|ENSG00000178209|Q15149|PLEC 12.531546534597751 0.4974689918368763 6 [VP]{I|L} 3 -1 14.181 0.0 0.0 1.5836 0.0 0.0 0.0 583.2737401239863 583.2737401239863 -3.354706403678877 0.0 -3.354706403678877 0.0 0 0.0 1.3010299956639813 0.0 0.0 [VP]{I|L} 1.5836 - 67 1 1.534 48472.2 1.0 1666 5211 6878 SUDHL4_400M_050219_2,6879 SUDHL4_400M_050219_2,6879,LLESAPVPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6880 35.298 539.0 183450.0 25 0 16509.0 29192 QGFFFWGGS 9 116 516.7302584285678 1031.4459639239356 2 516.7302734255791 MULTI CID FTMS 0 0 0 6878 137169.015625 0.3560977669580139 19 -0.5782279968261719 2 Unmodified _QGFFFWGGS_ ENST00000328381.9_2_17:29298258-29315050:+|nuORF 26.88365393820708 0.1891292719743517 6 {[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 7 4 43.829 0.0 0.0 4.2493 0.0 0.0 0.0 173.08228479556877 173.08228479556877 31.83976193625636 0.0 0.0 0.0 0 0.8807196863200843 0.721246399047171 0.4247425010840047 0.6747425010840047 {[QG]|[NA]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}ND 4.2493 - 689 + 1 1.534 79189.6 1.0 1667 5211 6878 SUDHL4_400M_050219_2,6880 SUDHL4_400M_050219_2,6880,QGFFFWGGS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6881 35.304 322.0 245580.0 25 0 19031.0 + 19796 LGSLSVVLGA 10 105 458.2784972466674 914.5424415601348 2 458.2786437869072 MULTI CID FTMS 0 0 0 6878 142368.0625 1.0 0 0.0 3 Unmodified _LGSLSVVLGA_ REV__ENSG00000185085|ENST00000330574|INTS5 21.74664581756881 0.480091245866545 6 [TA][KQ]KV{I|L}Q 8 -1 [TA][KQ]KV + + 22.959 0.23329 0.035596 2.5104 2.5104 50.946 0.0 0.0 0.0 0.0 3.521825181113627 0.0 0.0 0 0.5 0.0 0.0 0.0 [TA][KQ]KV{I|L}Q 2.5104 - 177 + 1 1.534 64847.3 1.0 1668 5211 6878 SUDHL4_400M_050219_2,6881 SUDHL4_400M_050219_2,6881,LGSLSVVLGA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6882 35.316 691.0 205300.0 25 0 25338.0 42237 VSLLKDVHT 9 100 506.29519084048906 1010.575828747778 2 506.2952148318291 MULTI CID FTMS 0 0 0 6878 111040.3203125 0.2670289775293893 -4 0.1014022827148437 4 Unmodified _VSLLKDVHT_ ENSG00000214595|ENST00000356458|EML6;nc|ENSG00000214595|Q6ZMW3-2|EML6 29.081581746732265 0.1611639662936252 6 [VS]{I|L}PPN{I|L} 7 6 50.45 0.0 0.0 4.9922 0.0 0.0 0.0 287.1251619928344 287.1251619928344 39.0299614621192 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.0 0.4247425010840047 [VS]{I|L}PPN{I|L} 4.9922 - 139 + 1 1.534 112358.5 1.0 1669 5211 6878 SUDHL4_400M_050219_2,6882 SUDHL4_400M_050219_2,6882,VSLLKDVHT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6883 35.33 800.0 45210.0 25 0 4923.1 -1 0 57 1023.4417561307494 3067.303438992448 3 1023.774951159954 MULTI CID FTMS 0 0 0 6878 72295.65625 1.0 0 0.0 5 6 CTY 3 -1 16.198 0.0 0.0 0.52808 0.0 0.0 2271.019516728579 426.12510095767817 2697.1446176862573 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 CTY 0.52808 - 56 + 1 1.534 29031.9 0.3700000047683716 1670 5211 6878 SUDHL4_400M_050219_2,6883 SUDHL4_400M_050219_2,6883, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6885 35.335 63.0 695010.0 25 0 60592.0 43541 WWWWIWWQWW 10 52 874.9037657894092 1747.7929786456184 2 875.4057494997978 MULTI CID FTMS 0 0 0 6884 794138.125 0.4654780431049136 9 -0.3725662231445312 1 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 8 36.643 0.0 0.0 2.0965 0.0 0.0 862.4300272190583 0.0 862.4300272190583 0.0 18.257659435244733 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.0965 - 118 1 1.534 37814.6 1.0 1671 5212 6884 SUDHL4_400M_050219_2,6885 SUDHL4_400M_050219_2,6885,WWWWIWWQWW False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 6886 35.336 82.0 625060.0 25 0 48181.0 -1 0 55 881.9128141677324 1761.8110754022648 2 881.9128295779228 MULTI CID FTMS 0 0 0 6884 634982.625 0.929822474094675 -1 0.0494956970214843 2 6 RQAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 10 -1 52.708 0.0 0.0 2.9917 0.0 0.0 578.2696400373062 0.0 578.2696400373062 0.0 33.622979524440325 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.805462187404089 RQAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.9917 - 144 1 1.534 39804.9 1.0 1672 5212 6884 SUDHL4_400M_050219_2,6886 SUDHL4_400M_050219_2,6886, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6887 35.35 800.0 187530.0 25 0 7153.1 + 29830 QQIGKVVQVY 10 160 581.3345249032155 1160.654496873231 2 581.3346435427666 MULTI CID FTMS 0 0 0 6884 159890.78125 0.5005503945603095 -2 0.086395263671875 3 Unmodified _QQLGKVVQVY_ ENSG00000161970|ENST00000648839|RPL26;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;ENSG00000037241|ENST00000265100|RPL26L1 30.63653989081413 0.2803493085145199 6 [TP]VVVEKQVY 10 7 [TP] + + 27.948 -2.3638 -1.1932 2.4079 2.4079 50.765 0.0 0.0 0.0 0.0 -3.509453949917834 -3.509453949917834 0.0 0 0.1435078169319297 0.0 1.4731975075880328 0.2887254899964357 [TP]VVVEKQVY 2.4079 - 4043 + 1 1.534 115923.4 0.6299999952316284 1673 5212 6884 SUDHL4_400M_050219_2,6887 SUDHL4_400M_050219_2,6887,QQLGKVVQVY False True QQIGKVVQVY 35.35027 581.334643542767 1700519.5 6884.0 ENSG00000161970|ENST00000648839|RPL26;;ENST00000584906.5_1_17:8280884-8283916:-|nuORF;;ENST00000415894.1_1_1:165788676-165788994:+|nuORF;;ENSG00000037241|ENST00000265100|RPL26L1 5.340106964111328 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6888 35.355 226.0 231050.0 25 0 33660.0 + -1 LLCGVHPPP 9 73 495.2645465277293 988.5145401222586 2 495.2677490115166 MULTI CID FTMS 0 0 0 6884 157557.046875 0.8328930978079467 -1 0.0494956970214843 4 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))GVHPPP_ REV__ENST00000572585.5_1_17:909322-915797:-|nuORF 14.581692164780916 0.4419739649577144 6 {I|L}{I|L}S 3 -1 27.447 0.0 0.0 2.7766 0.0 0.0 0.0 672.2984102838499 672.2984102838499 8.266062568876716 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}S 2.7766 - 57 + 1 1.534 44944.7 1.0 1674 5212 6884 SUDHL4_400M_050219_2,6888 SUDHL4_400M_050219_2,6888,LLCGVHPPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6889 35.36 276.0 354790.0 25 0 39350.0 + -1 IFGCPMLPA 9 102 503.2498600578818 1004.4851671825636 2 503.2493774294853 MULTI CID FTMS 0 0 0 6884 132483.03125 1.0 0 0.0 5 Carbamidomethyl (C) _IFGC(Carbamidomethyl (C))PMLPA_ REV__ENSG00000047578|ENST00000261588|KATNIP 14.581692164780916 0.4419739649577144 6 {I|L}{I|L}C(Carbamidomethyl (C))[W{M(Oxidation (M))|F}]VPA 8 -1 + 33.35 0.0 0.0 3.3201 3.3201 72.067 0.0 0.0 0.0 4.19347469197298 19.37076236157729 4.19347469197298 1.9728055812561929 0 0.9247425010840048 1.5228787452803376 0.0 0.0 {I|L}{I|L}C(Carbamidomethyl (C))[W{M(Oxidation (M))|F}]VPA;{I|L}{I|L}C(Carbamidomethyl (C))V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPA;{I|L}{I|L}C(Carbamidomethyl (C))V[W{M(Oxidation (M))|F}]PA;{I|L}{I|L}[CG][W{M(Oxidation (M))|F}]VPA;{I|L}{I|L}[CG]V{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPA;{I|L}{I|L}[CG]V[W{M(Oxidation (M))|F}]PA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))G]|[NC]}VPA;WV[W{M(Oxidation (M))|F}]AAEP;WV{[C(Carbamidomethyl (C))G]|[NC]}[RN]T{I|L};WV{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]EP 3.3201;3.1237;2.4788;2.398;2.207;1.5567;1.4722;1.2086;1.1245;1.0631 -;-;-;-;-;-;-;-;-;- 150 1 1.534 80331.9 1.0 1675 5212 6884 SUDHL4_400M_050219_2,6889 SUDHL4_400M_050219_2,6889,IFGCPMLPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6891 35.371 412.0 118260.0 25 0 9139.0 + 10102 FPTSQRLPA 9 75 508.77988973047206 1015.545226527744 2 508.7803527712822 MULTI CID FTMS 0 0 0 6890 88564.84375 0.179679155030731 43 -1.1701126098632812 1 Unmodified _FPTSQRLPA_ ENST00000399831.7_1_8:38965091-38975631:+|nuORF 19.256988751693697 0.3154191944385105 6 TPE 3 7 34.253 0.0 0.0 3.3728 0.0 0.0 670.3762516565109 0.0 670.3762516565109 0.0 15.836134377877327 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 TPE 3.3728 - 48 1 1.534 47264.5 1.0 1676 5213 6890 SUDHL4_400M_050219_2,6891 SUDHL4_400M_050219_2,6891,FPTSQRLPA False True FPTSQRLPA 35.370884 508.780352771282 6956420.5 6890.0 ENST00000399831.7_1_8:38965091-38975631:+|nuORF -0.2161752780278523 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6892 35.374 159.0 383110.0 25 0 36680.0 + 26509 NVELLPAAG 9 79 442.24788575936935 882.4812185855387 2 442.2478210330009 MULTI CID FTMS 0 0 0 6890 352622.40625 0.2674611408150125 -2 0.0793190002441406 2 Unmodified _NVELLPAAG_ ENST00000468928.5_1_7:157161553-157163538:+|nuORF 64.23631603340823 0.0237365939569086 6 {I|L}{I|L}ND{I|L} 5 7 34.983 0.0 0.0 3.9642 0.0 0.0 0.0 311.1355457056904 311.1355457056904 10.034445319293312 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3054621874040891 0.5501648626366046 {I|L}{I|L}ND{I|L} 3.9642 - 288 1 1.534 51790.8 1.0 1677 5213 6890 SUDHL4_400M_050219_2,6892 SUDHL4_400M_050219_2,6892,NVELLPAAG True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6893 35.388 800.0 88388.0 25 0 8806.9 -1 FPWPCQHHCFY 11 84 761.3147451441532 1520.6149373551063 2 761.8169433474541 MULTI CID FTMS 0 0 0 6890 110160.296875 1.0 0 0.0 3 Carbamidomethyl (C) _FPWPC(Carbamidomethyl (C))QHHCFY_ ENST00000501122.2_1_11:65211061-65211343:+|nuORF 6.2057823575117 0.8458686499021061 6 A[MD]DEAQQNA{M(Oxidation (M))|F}Y 12 -1 55.315 0.0 0.0 3.6377 0.0 0.0 119.0739765851578 0.0 119.0739765851578 0.0 35.66183773464459 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.3807196863200844 A[MD]DEAQQNA{M(Oxidation (M))|F}Y 3.6377 - 967 1 1.534 53677.6 0.5 1678 5213 6890 SUDHL4_400M_050219_2,6893 SUDHL4_400M_050219_2,6893,FPWPCQHHCFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6894 35.394 318.0 108660.0 25 0 12309.0 + -1 MPCYYKSL 8 74 510.7317308961965 1019.4489088591928 2 510.7322570681572 MULTI CID FTMS 0 0 0 6890 105705.3359375 1.0 0 0.0 4 Oxidation (M) _M(Oxidation (M))PCYYKSL_ REV__Tigger1_dup3614|chr4:153370819-153372334:-|1.1451237488797577|0.4461990466272801|1.36|48.0|7|1|sense 5.230669730166228 0.792582437072536 6 {I|L} 1 -1 12.764 0.0 0.0 1.2521 0.0 0.0 888.3540429918086 0.0 888.3540429918086 0.0 2.5831489800166807 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2521 + + 26 + 1 1.534 37736.8 1.0 1679 5213 6890 SUDHL4_400M_050219_2,6894 SUDHL4_400M_050219_2,6894,MPCYYKSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6895 35.407 800.0 164090.0 25 0 13555.0 + 18190 KVADWTGATY 10 152 556.2744237381047 1110.5342945430093 2 556.2752563357353 MULTI CID FTMS 0 0 0 6890 104977.8359375 0.2107223852738187 -3 0.1162185668945312 5 Unmodified _KVADWTGATY_ ENSG00000100353|ENST00000216190|EIF3D;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 71.70789743142352 0.0188816056000227 6 [TA]GA{I|L}WTGATY 11 4 + 66.643 0.0 0.0 6.001 6.001 80.125 0.0 0.0 0.0 2.609904221939644 14.98254769114986 2.609904221939644 1.7207530592221616 0 1.5629529932484498 0.6020599913279624 1.7404443404078205 0.0 [TA]GA{I|L}WTGATY;[TA]Q{I|L}WTGATY;[QT]A{I|L}WTGATY;[{I|L}A][QT]WTGATY;{[QV]|[N{I|L}]|[RA]|[KV]}ADWTGATY;[AG]TA{I|L}WTGATY;[KG]{I|L}DWTGATY;[YT][YK]{[DS]|[MA]|[CV]|TT}ATY;[TA]GA{I|L}WTQTY;{[SA]|[TG]}AA{I|L}WTGATY 6.001;5.846;5.7405;5.6798;5.6641;5.6135;5.4386;5.1821;5.116;5.0295 -;-;-;-;+;-;-;-;-;- + 2264 1 1.534 105500.7 0.5099999904632568 1680 5213 6890 SUDHL4_400M_050219_2,6895 SUDHL4_400M_050219_2,6895,KVADWTGATY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6896 35.421 800.0 127180.0 25 0 9773.0 -1 NWNCKMNQFY 10 122 710.7913336760942 1419.5681144189882 2 710.7919189333916 MULTI CID FTMS 0 0 0 6890 98768.7890625 0.6736985676503956 8 -0.342742919921875 6 Carbamidomethyl (C),Oxidation (M) _NWNC(Carbamidomethyl (C))KM(Oxidation (M))NQFY_ ENST00000244230.6_1_2:71360149-71360302:+|nuORF 7.289230182591677 0.6929195370588109 6 DEAQQNA{M(Oxidation (M))|F}Y 9 -1 67.401 0.0 0.0 4.748 0.0 0.0 335.1242542951188 0.0 335.1242542951188 0.0 32.870156338638594 0.0 0.0 0 0.7429928190999391 0.0 0.7742275032520141 0.8494850021680094 DEAQQNA{M(Oxidation (M))|F}Y 4.748 - 773 1 1.534 75827.0 0.4900000095367431 1681 5213 6890 SUDHL4_400M_050219_2,6896 SUDHL4_400M_050219_2,6896,NWNCKMNQFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6898 35.432 460.0 150730.0 25 0 11752.0 + 38351 TQMPDPKTF 9 101 540.7550312532467 1079.4955095732932 2 540.7552978396416 MULTI CID FTMS 0 0 0 6897 122578.078125 0.0460394410447038 11 -0.3727645874023437 1 Oxidation (M) _TQM(Oxidation (M))PDPKTF_ ENSG00000120963|ENST00000311212|ZNF706 45.739877483867886 0.0497104363764649 6 [QT]{M(Oxidation (M))|F}[DP]PKT{M(Oxidation (M))|F} 9 0 + 46.85 0.0 0.0 4.34 4.34 85.726 0.0 0.0 0.0 33.662509289818416 12.587418566968154 12.587418566968154 17.25054710168187 0 1.274227503252014 0.0 0.6549471895720985 0.4247425010840047 + + [QT]{M(Oxidation (M))|F}[DP]PKT{M(Oxidation (M))|F};[KP]T{M(Oxidation (M))|F}{[ET]|[MV]}{M(Oxidation (M))|F}[NP];[QT]{M(Oxidation (M))|F}{[ET]|[MV]}[KP]MV;[{M(Oxidation (M))|F}T][KP]{[ET]|[MV]}{M(Oxidation (M))|F}[NP];[{I|L}A]AA{M(Oxidation (M))|F}{[ET]|[MV]}{M(Oxidation (M))|F}[NP];[{I|L}A]{[QN]|[E{I|L}]|[KN]}[YN]{M(Oxidation (M))|F}[NP];[NP]T{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]} 4.34;2.742;1.3736;1.2725;1.105;0.77757;0.77674 +;-;-;-;-;-;- + 335 + 1 1.534 59918.2 1.0 1682 5214 6897 SUDHL4_400M_050219_2,6898 SUDHL4_400M_050219_2,6898,TQMPDPKTF True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6899 35.434 75.0 1127900.0 25 0 229330.0 + 39226 TYYGSFVTR 9 72 547.2694005801245 1092.524248227049 2 547.2693969607353 MULTI CID FTMS 0 0 0 6897 617729.75 0.2788845426420092 -2 0.0915412902832031 2 Unmodified _TYYGSFVTR_ ENSG00000147677|ENST00000521861|EIF3H;ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 33.4449034751529 0.1114409586740657 6 TYYGS 5 4 66.454 0.0 0.0 6.0826 0.0 0.0 0.0 518.2719992142686 518.2719992142686 52.95880017344075 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + TYYGS 6.0826 + + 32 + 1 1.534 70529.0 1.0 1683 5214 6897 SUDHL4_400M_050219_2,6899 SUDHL4_400M_050219_2,6899,TYYGSFVTR True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6900 35.436 123.0 488800.0 25 0 62944.0 + 9724 FLYDDNQRV 9 62 585.2826551676825 1168.550757402165 2 585.2827636599541 MULTI CID FTMS 0 0 0 6897 380531.03125 0.4564653896924155 -2 0.0915412902832031 3 Unmodified _FLYDDNQRV_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 38.17557092003332 0.0854718145212029 6 {M(Oxidation (M))|F}{I|L}YDDNQ[RV] 9 0 + 61.916 0.0 0.0 5.2985 5.2985 85.931 0.0 0.0 0.0 49.92615720758863 2.922152515121219 2.922152515121219 9.208187539523747 0 0.4247425010840047 0.0 0.0 0.8494850021680094 + + {M(Oxidation (M))|F}{I|L}YDDNQ[RV];{M(Oxidation (M))|F}{I|L}YDDN[AG][RV];{M(Oxidation (M))|F}{I|L}YDDGGQ[RV];{M(Oxidation (M))|F}{I|L}YDDGG[AG][RV] 5.2985;4.5105;4.5105;3.7263 +;-;-;- + 97 + 1 1.534 49225.8 1.0 1684 5214 6897 SUDHL4_400M_050219_2,6900 SUDHL4_400M_050219_2,6900,FLYDDNQRV True True FLYDDNQRV 35.436313 585.282763659954 9921645.0 6897.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;nc|ENSG00000131747|P11388-2|TOP2A;;ENSG00000077097|ENST00000264331|TOP2B 6.6092251141866045 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6901 35.45 800.0 151410.0 25 0 7297.9 -1 MLIFYDQRQVL 11 116 721.3803021429037 1440.7460513526073 2 721.3809081912041 MULTI CID FTMS 0 0 0 6897 139344.234375 0.7552229225196311 -1 0.0617179870605468 4 Oxidation (M) _M(Oxidation (M))LIFYDQRQVL_ ENSG00000007541|ENST00000321878|PIGQ;nc|ENSG00000007541|Q9BRB3-3|PIGQ;nc|ENSG00000007541|Q9BRB3|PIGQ 26.268140514670165 0.4754186812857754 6 {[SA]|[TG]}[PG][WK]PSQSANV{I|L} 14 -1 + 90.747 0.0 0.0 6.2986 6.2986 83.281 0.0 0.0 0.0 1.2662818281869903 55.55275002184071 1.2662818281869903 3.146028028532556 0 0.8609243748081782 1.0 2.853917193908117 0.4247425010840047 {[SA]|[TG]}[PG][WK]PSQSANV{I|L};{[NV]|[RG]}A[WR]PSQSANV{I|L};[PS]Q[WK]PSQSANV{I|L};{[QG]|[NA]}V[WR]PSQSANV{I|L};[KG]{[QD]|[EN]|[WG]|[KD]|[RS]}[TP]PSQSANV{I|L};[KG][Y{M(Oxidation (M))|F}]{I|L}{[DS]|[MA]|[CV]|TT}QSANV{I|L};{[NV]|[RG]}A[NP]{I|L}{[DS]|[MA]|[CV]|TT}QSANV{I|L};{[NV]|[RG]}A[WR]PS[AG]SANV{I|L};{[NV]|[RG]}A[WR]PSQSAGGV{I|L};[PS][AG][WK]PSQSANV{I|L} 6.2986;6.0802;5.9386;5.804;5.5779;5.5348;5.4505;5.4505;5.4505;5.3088 -;-;-;-;-;-;-;-;-;- 3290 1 1.534 90441.5 0.5799999833106995 1685 5214 6897 SUDHL4_400M_050219_2,6901 SUDHL4_400M_050219_2,6901,MLIFYDQRQVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6902 35.456 320.0 269670.0 25 0 100960.0 34379 SLTQAQEQG 9 101 481.2308772487116 0 481.2311279177666 PEAK CID FTMS 0 0 0 6897 134747.578125 0.984778818744341 -1 0.0617179870605468 5 Unmodified _SLTQAQEQG_ ENSG00000137221|ENST00000372449|TJAP1;ENST00000454762.1_1_6:43472456-43473590:+|nuORF;nc|ENSG00000137221|Q5JTD0-2|TJAP1;nc|ENSG00000137221|Q5JTD0-4|TJAP1 10.823927491677226 0.3028200641087142 6 {I|L} 1 8 6.9897 0.0 0.0 0.72775 0.0 0.0 762.2736918980107 82.06694971256093 844.3406416105717 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.72775 + + 24 + 1 1.534 71367.2 1.0 1686 5214 6897 SUDHL4_400M_050219_2,6902 SUDHL4_400M_050219_2,6902,SLTQAQEQG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6903 35.46 225.0 287190.0 25 0 16711.0 + + 28584 AQFPSSGRF 9 97 498.3035044870484 994.5924560408968 2 498.3034545779228 MULTI CID FTMS 0 0 0 6897 114485.703125 0.8774755057895407 -1 0.0617179870605468 6 Unmodified _PTVLPRKQG_ nc|ENSG00000176102|Q12996-2|CSTF3;ENSG00000176102|ENST00000323959|CSTF3;ENST00000526480.1_1_11:33157665-33182871:-|nuORF 4.3292370932331545 0.7635526921153418 6 SY 2 -1 13.188 0.0 0.0 1.3259 0.0 0.0 726.4864512574969 0.0 726.4864512574969 0.0 3.0065267629719017 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 1.3259 - 89 + 1 1.534 55741.4 1.0 1687 5214 6897 SUDHL4_400M_050219_2,6903 SUDHL4_400M_050219_2,6903,PTVLPRKQG False False AQFPSSGRF 35.460179 498.303454577923 853487.125 6897.0 nc|ENSG00000176102|Q12996-2|CSTF3;;ENSG00000176102|ENST00000323959|CSTF3;;ENST00000526480.1_1_11:33157665-33182871:-|nuORF 1.323091208934784 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6904 35.465 240.0 215740.0 25 0 13807.0 + 17706 KPTLAEGSI 9 77 458.2589299336827 0 458.2592956423759 PEAK CID FTMS 0 0 0 6897 103528.703125 1.0 0 0.0 7 Unmodified _KPTLAEGSI_ REV__ENST00000266542.8_1_12:7260992-7261829:-|nuORF 6.2057823575117 0.3444685223463735 6 M 1 -1 6.9897 0.0 0.0 0.76432 0.0 0.0 457.2754454613122 323.17197595767817 780.4474214189904 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 M 0.76432 - 4 + 1 1.534 50637.5 1.0 1688 5214 6897 SUDHL4_400M_050219_2,6904 SUDHL4_400M_050219_2,6904,KPTLAEGSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6905 35.478 800.0 190240.0 25 0 9639.0 + 11280 GEVDPKVAL 9 143 464.2610911227292 926.5076293122584 2 464.2625610232353 MULTI CID FTMS 0 0 0 6897 90784.9140625 0.4111160224481516 -2 0.0915412902832031 8 Unmodified _GEVDPKVAL_ ENSG00000099795|ENST00000215565|NDUFB7;ENST00000593353.5_1_19:14676947-14682853:-|nuORF 24.020572477871973 0.2255576514309169 6 {[DA]|[EG]}VD 4 5 36.471 0.0 0.0 3.9364 0.0 0.0 0.0 523.325508092972 523.325508092972 8.856062735983123 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.0 + {[DA]|[EG]}VD 3.9364 + + 489 + 1 1.534 120605.3 0.4199999868869781 1689 5214 6897 SUDHL4_400M_050219_2,6905 SUDHL4_400M_050219_2,6905,GEVDPKVAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6907 35.485 158.0 355650.0 25 0 62460.0 + 20239 LLDEPTNHL 9 83 526.2742924319465 1050.534031930693 2 526.2745849490166 MULTI CID FTMS 0 0 0 6906 380169.5 0.7083335080087515 2 -0.1057395935058593 1 Unmodified _LLDEPTNHL_ ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2 60.07390631473393 0.0260411565414776 6 {I|L}{I|L}DEPTN[H{I|L}] 9 0 + 85.601 0.0 0.0 8.1483 8.1483 95.363 0.0 0.0 0.0 61.69978440589176 5.642492736872597 5.642492736872597 13.455612550363796 0 0.9247425010840048 2.0 1.305462187404089 0.4247425010840047 + + {I|L}{I|L}DEPTN[H{I|L}];{I|L}{I|L}DEPTGG[H{I|L}];{I|L}[{M(Oxidation (M))|F}V][HA]TN[H{I|L}] 8.1483;6.8675;1.5075 +;-;- + 168 + 1 1.534 46605.7 1.0 1690 5215 6906 SUDHL4_400M_050219_2,6907 SUDHL4_400M_050219_2,6907,LLDEPTNHL True True LLDEPTNHL 35.485492 526.274584949017 7213743.0 6906.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2 6.187595049540202 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6908 35.499 800.0 78511.0 25 0 5606.0 -1 0 85 910.9139424723492 1819.8133320114985 2 911.4202148318292 MULTI CID FTMS 0 0 0 6906 89239.7890625 0.8704991249812147 -2 0.1188926696777343 2 6 EQEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 47.993 0.0 0.0 2.6373 0.0 0.0 734.3717518537125 0.0 734.3717518537125 0.0 29.97347713643002 0.0 0.0 0 0.805462187404089 0.0 0.3807196863200844 0.4247425010840047 EQEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.6373 - 442 1 1.534 44835.3 0.4300000071525574 1691 5215 6906 SUDHL4_400M_050219_2,6908 SUDHL4_400M_050219_2,6908, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6909 35.501 87.0 719700.0 25 0 68375.0 + 31510 RQGFVPAAY 9 61 504.766622902889 1007.518692872578 2 504.7667419314384 MULTI CID FTMS 0 0 0 6906 627424.0 0.7598869750723096 -2 0.1188926696777343 3 Unmodified _RQGFVPAAY_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 36.04419817259434 0.0971720506436186 6 PAAY 4 5 42.167 0.0 0.0 4.1852 0.0 0.0 587.3172596223812 0.0 587.3172596223812 0.0 23.47032539791456 0.0 0.0 0 1.5 0.0 0.0 0.0 + PAAY 4.1852 + + 41 + 1 1.534 57052.7 1.0 1692 5215 6906 SUDHL4_400M_050219_2,6909 SUDHL4_400M_050219_2,6909,RQGFVPAAY True True RQGFVPAAY 35.501277 504.766741931438 4894779.0 6906.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 7.380871613820394 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6910 35.507 301.0 439110.0 25 0 60443.0 + 42418 VTEKAVLP 8 111 428.7605195800278 855.5064862268556 2 428.7604553103447 MULTI CID FTMS 0 0 0 6906 305551.59375 1.0 0 0.0 4 Unmodified _VTEKAVLP_ REV__ENSG00000168803|ENST00000562188|ADAL;REV__nc|ENSG00000168803|Q6DHV7-2|ADAL;REV__nc|ENSG00000168803|Q6DHV7-3|ADAL 34.10243960390752 0.3329570729325616 6 {[VA]|[{I|L}G]}SS{I|L}AV[{I|L}P] 9 -1 + 33.302 0.0 0.0 3.8927 3.8927 77.608 0.0 0.0 0.0 5.474469367710746 7.147642715192511 5.474469367710746 5.474469367710746 0 0.5 1.0457574905606752 1.298455006504028 0.0 {[VA]|[{I|L}G]}SS{I|L}AV[{I|L}P];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}AV[{I|L}P];{[VA]|[{I|L}G]}SS{I|L}G{I|L}[{I|L}P];{[VA]|[{I|L}G]}K{[ET]|[MV]}V[{I|L}P];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}S{I|L}G{I|L}[{I|L}P];{[VA]|[{I|L}G]}K{[ES]|[DT]|[{I|L}C]}{I|L}[{I|L}P];[KA]V{[ET]|[MV]}V[{I|L}P];{[VA]|[{I|L}G]}[TA][VS]V[{I|L}P];KKEE{I|L}[{I|L}P];[KA]V{[ES]|[DT]|[{I|L}C]}{I|L}[{I|L}P] 3.8927;3.2528;2.9265;2.6152;2.2865;1.649;1.6171;1.4728;1.0849;0.65092 -;-;-;-;-;-;-;-;-;- 140 1 1.534 106395.5 1.0 1693 5215 6906 SUDHL4_400M_050219_2,6910 SUDHL4_400M_050219_2,6910,VTEKAVLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6911 35.521 800.0 276010.0 25 0 19468.0 + -1 GLMKKAYEL 9 158 534.7918501515783 1067.5691473699565 2 534.7913696169853 MULTI CID FTMS 0 0 0 6906 139334.640625 0.2827245406995236 -3 0.1487159729003906 5 Oxidation (M) _GLM(Oxidation (M))KKAYEL_ ENST00000558983.5_1_15:100173318-100211695:+|nuORF;nc|ENSG00000116604|Q14814-4|MEF2D;ENSG00000116604|ENST00000348159|MEF2D;nc|ENSG00000068305|Q02078|MEF2A;nc|ENSG00000068305|Q02078-6|MEF2A;chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;nc|ENSG00000081189|Q06413-2|MEF2C;nc|ENSG00000081189|Q06413-3|MEF2C;nc|ENSG00000068305|Q02078-4|MEF2A;ENSG00000213999|ENST00000424583|MEF2B;ENSG00000068305|ENST00000557942|MEF2A;nc|ENSG00000068305|Q02078-5|MEF2A;nc|ENSG00000081189|Q06413-5|MEF2C;nc|ENSG00000213999|Q02080|MEF2B;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;nc|ENSG00000068305|Q02078-3|MEF2A;nc|ENSG00000116604|Q14814-6|MEF2D;nc|ENSG00000116604|Q14814-2|MEF2D;ENSG00000081189|ENST00000504921|MEF2C;nc|ENSG00000081189|Q06413-6|MEF2C;nc|ENSG00000081189|Q06413-4|MEF2C;nc|ENSG00000116604|Q14814-3|MEF2D;nc|ENSG00000116604|Q14814-5|MEF2D 89.40071534611396 0.0152361884002446 6 {I|L}G{M(Oxidation (M))|F}KKAYE{I|L} 9 -1 + 79.649 0.0 0.0 7.4608 7.4608 88.063 0.0 0.0 0.0 5.255762612236907 9.0232697082579 5.255762612236907 5.255762612236907 0 2.059894379144197 2.0 1.610924374808178 0.0 {I|L}G{M(Oxidation (M))|F}KKAYE{I|L};G{I|L}{M(Oxidation (M))|F}KKAYE{I|L};{I|L}G{M(Oxidation (M))|F}KKAY{I|L}E;G{I|L}{M(Oxidation (M))|F}KKAY{I|L}E;{I|L}G{M(Oxidation (M))|F}KKA{[QN]|[E{I|L}]|[KN]}Y;G{I|L}{M(Oxidation (M))|F}KKA{[QN]|[E{I|L}]|[KN]}Y;{[VA]|[{I|L}G]}{M(Oxidation (M))|F}KKAYE{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}KKE{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L};{I|L}{M(Oxidation (M))|F}GKKAYE{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}KRT{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L} 7.4608;6.9685;6.6156;6.1233;5.5754;5.0831;4.642;4.0693;4.0557;3.6224 -;+;-;-;-;-;+;-;-;- + 2437 + 1 1.534 170439.7 0.6000000238418579 1694 5215 6906 SUDHL4_400M_050219_2,6911 SUDHL4_400M_050219_2,6911,GLMKKAYEL False False GLMKKAYEL 35.5206 534.791369616985 2457360.0 6906.0 ENST00000558983.5_1_15:100173318-100211695:+|nuORF;;nc|ENSG00000116604|Q14814-4|MEF2D;;ENSG00000116604|ENST00000348159|MEF2D;;nc|ENSG00000068305|Q02078|MEF2A;;nc|ENSG00000068305|Q02078-6|MEF2A;;chr19:19146405-19146555|48|12.67|0.26|5.58|-|ENST00000410050|MEF2B,MEF2B;;nc|ENSG00000081189|Q06413-2|MEF2C;;nc|ENSG00000081189|Q06413-3|MEF2C;;nc|ENSG00000068305|Q02078-4|MEF2A;;ENSG00000213999|ENST00000424583|MEF2B;;ENSG00000068305|ENST00000557942|MEF2A;;nc|ENSG00000068305|Q02078-5|MEF2A;;nc|ENSG00000081189|Q06413-5|MEF2C;;nc|ENSG00000213999|Q02080|MEF2B;;chr19:19146648-19147036|46|60.87|0.59|6.7|-|ENST00000409447|MEF2B,MEF2B;;chr19:19147832-19149217|46|32.67|0.68|5.58|-|ENST00000409224|MEF2B,MEF2B;;chr19:19157142-19170205|46|82.54|0.86|6.59|-|ENST00000409447|MEF2B,MEF2B;;ENST00000559036.5_1_15:100173318-100185981:+|nuORF;;nc|ENSG00000068305|Q02078-3|MEF2A;;nc|ENSG00000116604|Q14814-6|MEF2D;;nc|ENSG00000116604|Q14814-2|MEF2D;;ENSG00000081189|ENST00000504921|MEF2C;;nc|ENSG00000081189|Q06413-6|MEF2C;;nc|ENSG00000081189|Q06413-4|MEF2C;;nc|ENSG00000116604|Q14814-3|MEF2D;;nc|ENSG00000116604|Q14814-5|MEF2D 6.103361924489339 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6912 35.528 395.0 192040.0 25 0 15828.0 + 22707 LQFPVGRIHR 10 93 408.2437301537659 1221.7093610614977 3 408.2439147830009 MULTI CID FTMS 0 0 0 6906 138800.078125 0.8100544929857995 1 -0.0593948364257812 6 Unmodified _LQFPVGRIHR_ ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENSG00000164508|ENST00000297012|H2AC1;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-2|H2AZ2;nc|ENSG00000105968|Q71UI9-5|H2AZ2 19.62595529434964 0.5182375435722777 6 {I|L}Q{M(Oxidation (M))|F} 3 7 35.445 0.0 0.0 2.9013 0.0 0.0 0.0 830.4755963737357 830.4755963737357 17.028937514676482 0.0 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 + {I|L}Q{M(Oxidation (M))|F} 2.9013 + + 96 + 1 1.534 64831.2 1.0 1695 5215 6906 SUDHL4_400M_050219_2,6912 SUDHL4_400M_050219_2,6912,LQFPVGRIHR False True LQFPVGRIHR 35.527654 408.243914783001 983418.6875 6906.0 nc|ENSG00000105968|Q71UI9-5|H2AZ2;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000105968|ENST00000308153|H2AZ2;;ENSG00000164032|ENST00000296417|H2AZ1;;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;;nc|ENSG00000105968|Q71UI9-2|H2AZ2 4.663779576619466 3.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6913 35.538 583.0 238970.0 25 0 25387.0 + 1283 AIQDEIRSV 9 136 515.7803989496422 0 515.7804443240166 PEAK CID FTMS 0 0 0 6906 128743.234375 0.7662506686446396 -1 0.0571746826171875 7 Unmodified _AIQDEIRSV_ ENSG00000164109|ENST00000296509|MAD2L1;ENST00000504707.1_1_4:120981275-120987923:-|nuORF 69.10491478415734 0.015593057067598 6 QDE{I|L}R 5 4 51.013 0.0 0.0 4.9549 0.0 0.0 184.1203595153013 201.08831201724848 385.2086715325498 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 1.16944517631652 0.9476212463643424 + QDE{I|L}R 4.9549 + + 219 + 1 1.534 110723.9 1.0 1696 5215 6906 SUDHL4_400M_050219_2,6913 SUDHL4_400M_050219_2,6913,AIQDEIRSV True True AIQDEIRSV 35.537862 515.780444324017 877836.25 6906.0 ENST00000504707.1_1_4:120981275-120987923:-|nuORF;;ENSG00000164109|ENST00000296509|MAD2L1 5.914919853210449 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6915 35.543 64.0 579890.0 25 0 183010.0 + 6429 EAASPLLVPA 10 55 484.276416737616 966.538280542032 2 484.2765380740166 MULTI CID FTMS 0 0 0 6914 639538.8125 0.2840783997695529 2 -0.0811614990234375 1 Unmodified _EAASPLLVPA_ REV__ENSG00000063438|ENST00000684583|AHRR;REV__nc|ENSG00000063438|A9YTQ3-2|AHRR;REV__nc|ENSG00000063438|A9YTQ3-3|AHRR;REV__nc|ENSG00000063438|A9YTQ3|AHRR 13.90604991867851 0.6142120002215601 6 [VP]{I|L}{[CA]|SS}TP 7 -1 22.976 0.0 0.0 2.3771 0.0 0.0 0.0 282.1482408293945 282.1482408293945 13.76750709602099 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [VP]{I|L}{[CA]|SS}TP 2.3771 - 106 1 1.534 36982.6 1.0 1697 5216 6914 SUDHL4_400M_050219_2,6915 SUDHL4_400M_050219_2,6915,EAASPLLVPA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6916 35.557 800.0 47841.0 25 0 3984.8 -1 0 66 994.4312665240212 2980.271970172264 3 995.1027709841728 MULTI CID FTMS 0 0 0 6914 55879.7109375 0.7262330274348153 1 -0.0463447570800781 2 6 {[QS]|[NT]}VDT{I|L} 6 -1 23.862 0.0 0.0 0.80065 0.0 0.0 0.0 2333.9313079010326 2333.9313079010326 15.902887499330731 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 {[QS]|[NT]}VDT{I|L} 0.80065 - 323 1 1.534 33916.8 0.3899999856948852 1698 5216 6914 SUDHL4_400M_050219_2,6916 SUDHL4_400M_050219_2,6916, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6917 35.56 166.0 484360.0 25 0 54456.0 + 41020 VMDSKIVQV 9 115 517.7808569350582 1033.5471609369165 2 517.7815429568291 MULTI CID FTMS 0 0 0 6914 268372.1875 0.0830935965708264 -5 0.2576065063476562 3 Oxidation (M) _VM(Oxidation (M))DSKIVQV_ ENSG00000025800|ENST00000373625|KPNA6;ENSG00000114030|ENST00000344337|KPNA1;ENSG00000196911|ENST00000368564|KPNA5 61.08992128646608 0.0254786290039527 6 V{M(Oxidation (M))|F}DSK{I|L}VQV 9 0 + 56.372 0.0 0.0 5.4542 5.4542 78.776 0.0 0.0 0.0 22.83477804557308 6.638816223028471 6.638816223028471 1.87677978143428 0 2.7856668758921828 0.0 0.4247425010840047 0.4247425010840047 + + V{M(Oxidation (M))|F}DSK{I|L}VQV;[{M(Oxidation (M))|F}V]DSK{I|L}VQV;{NN|[MP]|[D{I|L}]|[EV]}[KS]V{M(Oxidation (M))|F}VQV;{[{M(Oxidation (M))|F}D]|MM}VSK{I|L}VQV;[{M(Oxidation (M))|F}V]DSK{I|L}V[AG]V;V{M(Oxidation (M))|F}DSK{I|L}V[AG]V;[{M(Oxidation (M))|F}V]D[KT]VVQV;{NN|[MP]|[D{I|L}]|[EV]}[KS]{M(Oxidation (M))|F}VVQV;{[QV]|[N{I|L}]|[RA]|[KV]}[TP]VTYQV;V[YT]QV[TP]QV 5.4542;5.2726;4.5728;4.4976;4.3817;4.1523;4.1304;4.0643;3.8728;3.8086 +;+;-;-;-;-;-;-;-;- + 640 + 1 1.534 65477.0 1.0 1699 5216 6914 SUDHL4_400M_050219_2,6917 SUDHL4_400M_050219_2,6917,VMDSKIVQV True False VMDSKIVQV 35.559777 517.781542956829 14589663.0 6914.0 ENSG00000114030|ENST00000344337|KPNA1;;ENSG00000025800|ENST00000373625|KPNA6;;ENSG00000196911|ENST00000368564|KPNA5 6.852958520253499 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6918 35.574 800.0 426720.0 25 0 48251.0 + 20158 LKPGILPVPK 10 157 531.3577347660307 1060.700916598861 2 531.3577148318291 MULTI CID FTMS 0 0 0 6914 205988.53125 0.0710752502803272 -5 0.2576065063476562 4 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 40.72490554402381 0.149912226101682 6 K{I|L}AP{I|L}VPPVK 10 -1 + 99.332 0.0 0.0 9.3647 9.3647 96.362 0.0 0.0 0.0 67.1572451947097 4.736093364526724 4.736093364526724 12.850234014460398 0 3.744084020450552 1.0457574905606752 0.0 0.2742275032520141 K{I|L}AP{I|L}VPPVK;[K{I|L}]AP{I|L}VPPVK;K{I|L}AP{I|L}VPK[VP];K{I|L}AP{I|L}VKP[VP];[K{I|L}]AV[{I|L}P]PPVK;[{I|L}A]KP{I|L}VPPVK;[{I|L}P]A{I|L}KVPPVK;[{I|L}P]AK{I|L}VPPVK;K{I|L}T[K{I|L}]A{I|L}{M(Oxidation (M))|F}K;[{I|L}P]VA{I|L}KPPVK 9.3647;8.1533;7.2903;7.265;6.8677;5.9334;5.4349;5.4211;5.3602;5.227 -;-;-;-;-;-;-;-;-;- 1906 + 1 1.534 257526.9 0.75 1700 5216 6914 SUDHL4_400M_050219_2,6918 SUDHL4_400M_050219_2,6918,LKPGILPVPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6919 35.584 608.0 229460.0 25 0 21911.0 + 17968 KRGPVPPG 8 158 404.245611172629 806.4766694120581 2 404.2450744509697 MULTI CID FTMS 0 0 0 6914 108893.828125 0.5993784330047671 -2 0.1165695190429687 5 Unmodified _KRGPVPPG_ REV__ENST00000324849.8_1_8:17104467-17104572:+|nuORF 5.760428011301431 0.7893668129297577 6 {I|L}{I|L}{I|L}HR 5 -1 36.274 0.0 0.0 4.4979 0.0 0.0 156.05274525007036 0.0 156.05274525007036 0.0 25.895665536112737 0.0 0.0 0 0.805462187404089 0.0 0.0 0.2302046884880938 {I|L}{I|L}{I|L}HR 4.4979 - 71 + 1 1.534 112451.8 1.0 1701 5216 6914 SUDHL4_400M_050219_2,6919 SUDHL4_400M_050219_2,6919,KRGPVPPG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6921 35.595 401.0 129230.0 25 0 25792.0 + 20715 LLSAEPVPA 9 84 448.75814221499 895.50173149678 2 448.7579223513603 MULTI CID FTMS 0 0 0 6920 99787.6875 0.0067998262014366 26 -0.4866447448730469 1 Unmodified _LLSAEPVPA_ ENSG00000007312|ENST00000006750|CD79B;ENST00000558969.1_1_17:62008689-62009627:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B 13.50788311687929 0.4710407108020397 6 [VP]{I|L}W 4 7 17.536 0.0 0.0 1.9582 0.0 0.0 0.0 397.20684559273633 397.20684559273633 12.931825014007217 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 [VP]{I|L}W 1.9582 - 69 1 1.534 45473.8 1.0 1702 5217 6920 SUDHL4_400M_050219_2,6921 SUDHL4_400M_050219_2,6921,LLSAEPVPA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6922 35.609 800.0 163210.0 25 0 19572.0 + + -1 RLYGYFHDA 9 116 571.2780933432279 1140.5416337532556 2 571.2747680544853 MULTI CID FTMS 0 0 0 6920 148247.328125 1.0 0 0.0 2 Carbamidomethyl (C) _QC(Carbamidomethyl (C))NKIRHGE_ chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;ENSG00000087586|ENST00000395915|AURKA 10.823927491677226 0.5436922275383211 6 Y{M(Oxidation (M))|F}HDA 5 -1 48.628 0.0 0.0 4.2636 0.0 0.0 489.2717457501969 0.0 489.2717457501969 0.0 21.699696211051744 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 Y{M(Oxidation (M))|F}HDA 4.2636 - 379 1 1.534 100412.7 0.6200000047683716 1703 5217 6920 SUDHL4_400M_050219_2,6922 SUDHL4_400M_050219_2,6922,QCNKIRHGE False False RLYGYFHDA 35.609091 571.274768054485 679224.375 6920.0 chr20:56390665-56392154|35|10.49|0.64|4.04|-|ENST00000441357|AURKA,AURKA;;ENSG00000087586|ENST00000395915|AURKA 6.309210618336995 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6923 35.614 258.0 310800.0 25 0 34780.0 + 1249 AILDHNPSI 9 92 490.2645011278254 978.5144493224508 2 490.2644836306572 MULTI CID FTMS 0 0 0 6920 134534.21875 0.3701531110360025 -3 0.1629142761230468 3 Unmodified _AILDHNPSI_ ENSG00000131242|ENST00000621161|RAB11FIP4;ENST00000578148.1_1_17:29858134-29858747:+|nuORF;nc|ENSG00000131242|Q86YS3-2|RAB11FIP4 41.95555342248728 0.0647214845423414 6 [{I|L}A]{I|L}DHNSP{I|L} 9 2 + 68.911 0.0 0.0 7.0424 7.0424 91.086 0.0 0.0 0.0 51.16328226178887 11.522044440423898 11.522044440423898 9.208187539523747 0 1.2302046884880935 2.0 0.4247425010840047 0.0 [{I|L}A]{I|L}DHNSP{I|L};[{I|L}A]{I|L}DHGGSP{I|L};[{I|L}A]{I|L}DHNPS{I|L};[{I|L}A]M[{I|L}A]N{M(Oxidation (M))|F}S{I|L};[{I|L}A]{I|L}DHGGPS{I|L};[{I|L}A]MN[{I|L}A]{M(Oxidation (M))|F}S{I|L};[{I|L}A]{I|L}{[DS]|[MA]|[CV]|TT}N{M(Oxidation (M))|F}S{I|L};[{I|L}A]M[{I|L}A]GG{M(Oxidation (M))|F}S{I|L};[{I|L}A]MGG[{I|L}A]{M(Oxidation (M))|F}S{I|L};[{I|L}A]M[Y{I|L}]QQ{I|L} 7.0424;6.1013;5.9781;5.0429;5.0371;4.7352;4.3012;4.1018;3.7942;3.7055 -;-;+;-;-;-;-;-;-;- + 387 + 1 1.534 67427.3 1.0 1704 5217 6920 SUDHL4_400M_050219_2,6923 SUDHL4_400M_050219_2,6923,AILDHNPSI True True AILDHNPSI 35.61388 490.264483630657 1552389.875 6920.0 nc|ENSG00000131242|Q86YS3-2|RAB11FIP4;;ENSG00000131242|ENST00000621161|RAB11FIP4;;ENST00000578148.1_1_17:29858134-29858747:+|nuORF 6.164546489715576 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6924 35.619 280.0 222410.0 25 0 30945.0 + 14882 ILLDNDHYA 9 110 537.2665021065029 1072.5184512798055 2 537.2665893435478 MULTI CID FTMS 0 0 0 6920 126500.9765625 1.0 0 0.0 4 Unmodified _ILLDNDHYA_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 21.53697664764585 0.2571576504437394 6 {I|L}{I|L}{I|L}DNDA{[WN]|[YH]} 9 2 + 58.07 0.0 0.0 5.4143 5.4143 78.005 0.0 0.0 0.0 36.47817481888637 1.4612803567823818 1.4612803567823818 1.4612803567823818 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}{I|L}DNDA{[WN]|[YH]};{I|L}{I|L}{I|L}DND[HS]{M(Oxidation (M))|F};{I|L}{I|L}{I|L}DGGDA{[WN]|[YH]};{I|L}{I|L}{I|L}DGGD[HS]{M(Oxidation (M))|F} 5.4143;5.2781;4.5558;4.4195 -;-;-;- 264 + 1 1.534 54832.0 1.0 1705 5217 6920 SUDHL4_400M_050219_2,6924 SUDHL4_400M_050219_2,6924,ILLDNDHYA False True ILLDNDHYA 35.619037 537.266589343548 864687.875 6920.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 4.718408425649007 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6926 35.624 87.0 612060.0 25 0 45554.0 + 43542 WWWWIWWQWW 10 57 874.9037657894092 1747.7929786456184 2 874.9051391482353 MULTI CID FTMS 0 0 0 6925 513639.375 0.3038327776038106 15 -0.2960128784179687 1 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 8 61.164 0.0 0.0 3.4995 0.0 0.0 734.3651600568375 0.0 734.3651600568375 0.0 41.45750937337162 0.0 0.0 0 1.0 0.0 0.0 0.805462187404089 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.4995 - 165 1 1.534 41284.8 1.0 1706 5218 6925 SUDHL4_400M_050219_2,6926 SUDHL4_400M_050219_2,6926,WWWWIWWQWW False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 6927 35.632 489.0 156800.0 25 0 23014.0 -1 0 75 561.3120186119639 560.3047421453639 1 561.3140136599541 MULTI CID FTMS 0 0 0 6925 142868.625 0.0750934422891657 7 -0.1750335693359375 2 6 Y 1 -1 15.485 0.0 0.0 2.7636 0.0 0.0 379.2303383141123 0.0 379.2303383141123 0.0 -1.2590598649689966 -1.2590598649689966 0.0 0 0.0 0.0 0.0 0.0 Y 2.7636 - 12 + 1 1.534 62731.5 1.0 1707 5218 6925 SUDHL4_400M_050219_2,6927 SUDHL4_400M_050219_2,6927, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6928 35.636 160.0 464790.0 25 0 39440.0 + 22723 LQHPNIVGY 9 90 520.7798573404518 1039.5451617477036 2 520.7802612185478 MULTI CID FTMS 0 0 0 6925 356380.5625 0.6941921784194579 -2 0.0811614990234375 3 Unmodified _LQHPNIVGY_ ENSG00000086232|ENST00000199389|EIF2AK1;nc|ENSG00000086232|Q9BQI3-2|EIF2AK1 34.10243960390752 0.1078313939113124 6 [NP]{I|L}HQ{I|L}VGY 9 5 + 62.158 0.0 0.0 5.9794 5.9794 85.775 0.0 0.0 0.0 1.2096975989031478 51.70055737786221 1.2096975989031478 7.271212547196626 0 1.25 0.0 0.0 0.3494850021680094 [NP]{I|L}HQ{I|L}VGY;[NP]{I|L}HQV{I|L}GY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}VGY;[NP]{I|L}H[AG]{I|L}VGY;[VG][PA]HQ{I|L}VGY;[NP]{I|L}HVQ{I|L}GY;[NP]{I|L}HVAAVGY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}QV{I|L}GY;[NP]{I|L}H[AG]V{I|L}GY;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[QV]|[N{I|L}]|[RA]|[KV]}[AG]{I|L}VGY 5.9794;5.2799;5.1854;5.0936;4.9446;4.8209;4.6346;4.486;4.3941;4.2996 -;-;-;-;-;-;-;-;-;- 372 1 1.534 60526.3 1.0 1708 5218 6925 SUDHL4_400M_050219_2,6928 SUDHL4_400M_050219_2,6928,LQHPNIVGY True True LQHPNIVGY 35.635653 520.780261218548 2424598.5 6925.0 ENSG00000086232|ENST00000199389|EIF2AK1;;nc|ENSG00000086232|Q9BQI3-2|EIF2AK1 3.725598335266113 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6929 35.648 695.0 174880.0 25 0 26116.0 + 12608 GVIQPGRGF 9 121 465.7614661660716 929.5083793989432 2 465.7609741091728 MULTI CID FTMS 0 0 0 6925 113350.1328125 0.384295464085601 -6 0.2892723083496094 4 Unmodified _GVIQPGRGF_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 60.38955033654506 0.025866396858536 6 [VG]{I|L}QPGRG{M(Oxidation (M))|F} 9 0 + 56.921 0.0 0.0 6.1238 6.1238 86.521 0.0 0.0 0.0 46.32546195430111 5.9033397951942845 5.9033397951942845 7.861201800549189 0 0.8494850021680094 1.6989700043360187 0.0 0.7614393726401688 + + [VG]{I|L}QPGRG{M(Oxidation (M))|F};[VG]{I|L}Q{M(Oxidation (M))|F}[RN]P;[VG]{I|L}[AG]PGRG{M(Oxidation (M))|F};[VG]{I|L}QP[RN]{M(Oxidation (M))|F};[VG]{I|L}[AG]{M(Oxidation (M))|F}[RN]P;[VG]{I|L}[AG]P[RN]{M(Oxidation (M))|F};R{I|L}QPG[VG]G{M(Oxidation (M))|F};R{I|L}Q{[ET]|[MV]}[NG]{I|L};R{I|L}Q[KC][VS]P;[VG]{I|L}{[NV]|[RG]}[QP]G{M(Oxidation (M))|F} 6.1238;5.2781;5.1332;4.8945;4.2816;3.898;3.8864;3.4288;3.2428;2.89 +;-;-;-;-;-;-;-;-;- + 364 + 1 1.534 99195.0 1.0 1709 5218 6925 SUDHL4_400M_050219_2,6929 SUDHL4_400M_050219_2,6929,GVIQPGRGF True True GVIQPGRGF 35.647711 465.760974109173 2061140.75 6925.0 ENST00000526368.1_1_11:62530297-62533976:+|nuORF;;ENSG00000168002|ENST00000301788|POLR2G;;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 5.926727135976155 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6930 35.657 548.0 157670.0 25 0 6397.9 10071 FPRQQLDL 8 112 508.77988973047206 1015.545226527744 2 508.7791625857353 MULTI CID FTMS 0 0 0 6925 105492.1171875 0.2140209780323003 48 -1.198261260986328 5 Unmodified _FPRQQLDL_ ENSG00000242419|ENST00000306593|PCDHGC4;nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4 16.942295170755138 0.6606234159769251 6 GTPE 4 8 30.037 0.0 0.0 2.9577 0.0 0.0 613.3556385724625 0.0 613.3556385724625 0.0 6.33462431849793 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 GTPE 2.9577 - 206 1 1.534 72534.6 1.0 1710 5218 6925 SUDHL4_400M_050219_2,6930 SUDHL4_400M_050219_2,6930,FPRQQLDL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6931 35.668 582.0 127080.0 25 0 13981.0 34035 SLKNLDNSV 9 111 495.2645465277293 988.5145401222586 2 495.2613403201103 MULTI CID FTMS 0 0 0 6925 108388.03125 0.5729711549159615 5 -0.1444091796875 6 Unmodified _SLKNLDNSV_ ENSG00000214021|ENST00000685419|TTLL3;ENST00000473661.5_1_3:9867594-9876502:+|nuORF;nc|ENSG00000214021|Q9Y4R7-2|TTLL3;nc|ENSG00000214021|Q9Y4R7-5|TTLL3;nc|ENSG00000214021|Q9Y4R7-6|TTLL3;nc|ENSG00000214021|Q9Y4R7|TTLL3;nc|ENSG00000241553|P59998-2|ARPC4 28.486842064014134 0.1687311288560894 6 {I|L}{I|L}D 3 6 24.705 0.0 0.0 2.4992 0.0 0.0 0.0 644.2960397162617 644.2960397162617 0.5276026171873482 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}D 2.4992 - 363 1 1.534 61964.7 1.0 1711 5218 6925 SUDHL4_400M_050219_2,6931 SUDHL4_400M_050219_2,6931,SLKNLDNSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6932 35.673 313.0 169280.0 25 0 9788.3 38657 TTIKAFFPKK 10 105 394.2418902430159 1179.7038413292476 3 394.2425720095634 MULTI CID FTMS 0 0 0 6925 89618.0625 0.9675797726770656 2 -0.0687217712402343 7 Unmodified _TTIKAFFPKK_ ENST00000510740.1_1_5:36668711-36725248:-|nuORF 13.042465956692816 0.6287021003332052 6 KY{I|L}WKK 6 7 32.912 0.0 0.0 2.7899 0.0 0.0 315.18115307830766 0.0 315.18115307830766 0.0 23.44843468456581 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 KY{I|L}WKK 2.7899 - 74 + 1 1.534 46309.2 1.0 1712 5218 6925 SUDHL4_400M_050219_2,6932 SUDHL4_400M_050219_2,6932,TTIKAFFPKK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6934 35.68 136.0 293920.0 25 0 25529.0 + 20582 LLNVEPAGA 9 86 442.24788575936935 882.4812185855387 2 442.2477905154228 MULTI CID FTMS 0 0 0 6933 295639.53125 0.2242401075389421 4 -0.0902099609375 1 Unmodified _LLNVEPAGA_ ENST00000534096.5_1_19:50838046-50848012:-|nuORF;ENST00000534789.5_1_19:50838228-50848012:-|nuORF 36.04419817259434 0.0971720506436186 6 {I|L}{I|L}NVEPAGA 9 0 {I|L}{I|L}NVE + + 28.487 24.437 4.2998 3.2281 3.2281 51.993 0.0 0.0 0.0 0.0 -0.012714607746318 -0.012714607746318 0.0 0 0.5 0.0 0.0 0.0 + + {I|L}{I|L}NVEPAGA 3.2281 + + 150 + 1 1.541 34766.7 1.0 1713 5219 6933 SUDHL4_400M_050219_2,6934 SUDHL4_400M_050219_2,6934,LLNVEPAGA True True LLNVEPAGA 35.679847 442.247790515423 12869258.0 6933.0 ENST00000534096.5_1_19:50838046-50848012:-|nuORF;;ENST00000534789.5_1_19:50838228-50848012:-|nuORF 6.175201574961345 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6935 35.688 445.0 124510.0 25 0 12689.0 + 18191 KVADWTGATY 10 91 556.2744237381047 1110.5342945430093 2 556.2756835818291 MULTI CID FTMS 0 0 0 6933 70718.9140625 0.1419543289508878 3 -0.0637702941894531 2 Unmodified _KVADWTGATY_ ENSG00000100353|ENST00000216190|EIF3D;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D 35.61225514009592 0.2039006631696762 6 DWTGATY 7 3 60.125 0.0 0.0 5.4141 0.0 0.0 298.20054824043126 0.0 298.20054824043126 0.0 28.698660554854385 0.0 0.0 0 1.0 0.0 0.805462187404089 0.0 + DWTGATY 5.4141 + + 228 1 1.541 46832.6 1.0 1714 5219 6933 SUDHL4_400M_050219_2,6935 SUDHL4_400M_050219_2,6935,KVADWTGATY False True KVADWTGATY 35.687757 556.275683581829 5421959.5 6933.0 nc|ENSG00000100353|O15371-2|EIF3D;;ENSG00000100353|ENST00000216190|EIF3D;;nc|ENSG00000100353|O15371-3|EIF3D 7.422585964202881 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6937 35.693 69.0 1054800.0 25 0 197530.0 + 39227 TYYGSFVTR 9 72 547.2694005801245 1092.524248227049 2 547.2693969607353 MULTI CID FTMS 0 0 0 6936 777127.875 0.3508475219037637 4 -0.1023063659667968 1 Unmodified _TYYGSFVTR_ ENSG00000147677|ENST00000521861|EIF3H;ENST00000517974.1_1_8:117671049-117768052:-|nuORF;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 40.23920728925047 0.0741434193262949 6 [YT]YGS{M(Oxidation (M))|F}VTR 9 0 + 75.2 0.0 0.0 6.8831 6.8831 93.935 0.0 0.0 0.0 62.10077508221467 18.913639751834097 18.913639751834097 19.20818753952375 0 0.4247425010840047 2.0 0.3807196863200844 0.7302046884880937 + + [YT]YGS{M(Oxidation (M))|F}VTR;[YT]Y[YQ]VTR;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{M(Oxidation (M))|F}SGY[{M(Oxidation (M))|F}V];{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V[YQ]Y[{M(Oxidation (M))|F}V] 6.8831;5.125;4.324;2.2174 +;-;-;- + 57 + 1 1.541 58506.5 1.0 1715 5220 6936 SUDHL4_400M_050219_2,6937 SUDHL4_400M_050219_2,6937,TYYGSFVTR True True TYYGSFVTR 35.692544 547.269396960735 25028942.0 6936.0 ENST00000517974.1_1_8:117671049-117768052:-|nuORF;;ENSG00000147677|ENST00000521861|EIF3H;;ENST00000518034.5_1_8:117671049-117768048:-|nuORF 9.416467189788818 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6938 35.699 353.0 243200.0 25 0 29097.0 + 9725 FLYDDNQRV 9 75 585.2826551676825 1168.550757402165 2 585.2828246951103 MULTI CID FTMS 0 0 0 6936 216601.796875 0.2598243388820194 4 -0.1023063659667968 2 Unmodified _FLYDDNQRV_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 32.78568957990786 0.1150597335874693 6 {I|L}[WP]DDY{I|L}E 8 7 45.394 0.0 0.0 3.8846 0.0 0.0 119.0738774030289 0.0 119.0738774030289 0.0 34.4027778696756 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}[WP]DDY{I|L}E 3.8846 - 93 1 1.541 71465.0 1.0 1716 5220 6936 SUDHL4_400M_050219_2,6938 SUDHL4_400M_050219_2,6938,FLYDDNQRV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6939 35.702 174.0 291790.0 25 0 12369.0 + 17881 KQMEQISQF 9 91 577.7785681306358 1153.5425833280715 2 577.7794067263603 MULTI CID FTMS 0 0 0 6936 315177.96875 0.7915090624485476 -2 0.0687217712402343 3 Oxidation (M) _KQM(Oxidation (M))EQISQF_ ENSG00000144834|ENST00000478951|TAGLN3;ENSG00000158710|ENST00000368097|TAGLN2;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;nc|ENSG00000158710|P37802-2|TAGLN2 65.23502041540118 0.0231836506122253 6 S{I|L}TEHQ{M(Oxidation (M))|F} 7 6 58.127 0.0 0.0 5.039 0.0 0.0 293.1355531540465 0.0 293.1355531540465 0.0 47.64268234850924 0.0 0.0 0 0.3807196863200844 0.0 0.805462187404089 1.674742501084005 S{I|L}TEHQ{M(Oxidation (M))|F} 5.039 - 286 + 1 1.541 41872.1 1.0 1717 5220 6936 SUDHL4_400M_050219_2,6939 SUDHL4_400M_050219_2,6939,KQMEQISQF True False KQMEQISQF 35.702328 577.77940672636 1819151.875 6936.0 ENSG00000158710|ENST00000368097|TAGLN2;;ENST00000478033.1_1_1:159889062-159890299:-|nuORF;;nc|ENSG00000158710|P37802-2|TAGLN2;;ENSG00000144834|ENST00000478951|TAGLN3 2.2359397212664285 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6941 35.719 800.0 93664.0 25 0 15145.0 -1 0 65 674.6914141602688 2021.0524130810063 3 675.0260497927666 MULTI CID FTMS 0 0 0 6940 81003.859375 0.6642865906416806 -18 0.6700859069824219 1 6 KPTGAR[PS][{I|L}A] 10 -1 42.198 0.0 0.0 2.0879 0.0 0.0 1024.481644262018 0.0 1024.481644262018 0.0 28.70297202896872 0.0 0.0 0 1.0 0.0 0.75 0.3807196863200844 KPTGAR[PS][{I|L}A] 2.0879 - 180 + 1 1.541 64180.5 0.4699999988079071 1718 5221 6940 SUDHL4_400M_050219_2,6941 SUDHL4_400M_050219_2,6941, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6942 35.733 800.0 145250.0 25 0 17712.0 + 16479 KAISRWSSL 9 114 524.3012625824728 1046.5879722317454 2 524.3020507693291 MULTI CID FTMS 0 0 0 6940 97020.5078125 0.5605929491085946 -4 0.1181106567382812 2 Unmodified _KAISRWSSL_ ENSG00000163468|ENST00000295688|CCT3;nc|ENSG00000163468|P49368-2|CCT3 38.61474834105838 0.0830609365873449 6 KA{I|L}SAA{[WT]|[RM]}S{I|L} 10 3 + 53.438 0.0 0.0 5.106 5.106 82.125 0.0 0.0 0.0 23.64206811880433 4.95068183135416 4.95068183135416 6.53212513775344 0 2.0669015600442577 0.0 0.5356668758921829 0.0 KA{I|L}SAA{[WT]|[RM]}S{I|L};KA{I|L}[QT]{[WT]|[RM]}S{I|L};K{I|L}ASAA{[WT]|[RM]}S{I|L};KA{I|L}SAA{[WT]|[RM]}TV;K{I|L}A[QT]{[WT]|[RM]}S{I|L};{I|L}KASAA{[WT]|[RM]}S{I|L};KA{I|L}[QT]{[WT]|[RM]}TV;K{I|L}ASAA{[WT]|[RM]}TV;{I|L}KA[QT]{[WT]|[RM]}S{I|L};K{I|L}A[QT]{[WT]|[RM]}TV 5.106;4.4818;4.4546;4.0402;3.8304;3.7909;3.4161;3.3888;3.1668;2.7647 -;-;-;-;-;-;-;-;-;- 433 + 1 1.541 92610.9 0.4900000095367431 1719 5221 6940 SUDHL4_400M_050219_2,6942 SUDHL4_400M_050219_2,6942,KAISRWSSL True True KAISRWSSL 35.732542 524.302050769329 808259.125 6940.0 ENSG00000163468|ENST00000295688|CCT3;;nc|ENSG00000163468|P49368-2|CCT3 2.034206430117289 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6943 35.737 239.0 216780.0 25 0 10853.0 + 12169 GQPDISRPF 9 88 508.7611555746713 1015.5077582161424 2 508.7597228884697 MULTI CID FTMS 0 0 0 6940 92899.8515625 0.4206598021616582 -22 0.8358497619628906 3 Unmodified _GQPDISRPF_ ENSG00000102786|ENST00000311234|INTS6;ENST00000504674.1_1_5:39720798-39721572:-|nuORF;nc|ENSG00000102786|Q9UL03-3|INTS6 16.149105407346934 0.3995459350917656 6 {[QG]|[NA]}PD{I|L} 5 4 26.466 0.0 0.0 2.6062 0.0 0.0 0.0 502.2429079273133 502.2429079273133 0.2680249241196719 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {[QG]|[NA]}PD{I|L} 2.6062 + + 93 + 1 1.541 47870.0 1.0 1720 5221 6940 SUDHL4_400M_050219_2,6943 SUDHL4_400M_050219_2,6943,GQPDISRPF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6945 35.754 747.0 110060.0 25 0 14577.0 30948 RKQRKIAV 8 124 499.8340697431988 997.6535865531976 2 499.8340637087822 MULTI CID FTMS 0 0 0 6944 40184.7421875 0.1558118286742278 4 -0.0810470581054687 1 Unmodified _RKQRKIAV_ ENSG00000133958|ENST00000695012|UNC79;nc|ENSG00000133958|Q9P2D8-2|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;nc|ENSG00000133958|Q9P2D8|UNC79 18.13498045792455 0.6430038125133779 6 {[VA]|[{I|L}G]}[{I|L}V]SVK{I|L}AV 10 6 + 34.675 0.0 0.0 3.4757 3.4757 72.729 0.0 0.0 0.0 1.9957235490520373 13.433269541151487 1.9957235490520373 1.9957235490520373 0 0.805462187404089 1.2218487496163564 0.0 0.0 {[VA]|[{I|L}G]}[{I|L}V]SVK{I|L}AV;[{I|L}A]VVSVK{I|L}AV;{[VA]|[{I|L}G]}[{I|L}V]SVKA{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]VK{I|L}AV;[K{I|L}]VEVK{I|L}AV;[{I|L}A]VVSVKA{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]VKA{I|L}V;[K{I|L}]VEVKA{I|L}V;{[VA]|[{I|L}G]}[TA]{I|L}{I|L}K{I|L}AV;[{I|L}A]{[SA]|[TG]}{I|L}{I|L}K{I|L}AV 3.4757;3.2757;2.8493;2.7674;2.6755;2.6493;2.141;2.0491;1.9438;1.7438 -;-;-;-;-;-;-;-;-;- 1000 1 1.541 69660.9 1.0 1721 5222 6944 SUDHL4_400M_050219_2,6945 SUDHL4_400M_050219_2,6945,RKQRKIAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6946 35.758 214.0 329460.0 25 0 58162.0 + 1304 AIVDKVPSV 9 86 464.2791342711911 926.5437156091822 2 464.2789184451103 MULTI CID FTMS 0 0 0 6944 296504.53125 0.1134806465350993 -24 0.8921966552734375 2 Unmodified _AIVDKVPSV_ ENSG00000181789|ENST00000314797|COPG1 27.628801355627647 0.1796483985696185 6 [{I|L}A]VDKVPSV 9 0 + 52.924 0.0 0.0 5.712 5.712 88.81 0.0 0.0 0.0 31.68185694278793 6.977309322204697 6.977309322204697 10.740471300485517 0 0.7742275032520141 2.0 0.0 0.0 + + [{I|L}A]VDKVPSV;[{I|L}A]VDKV[VS]P 5.712;4.5528 +;- + 156 + 1 1.541 61023.0 1.0 1722 5222 6944 SUDHL4_400M_050219_2,6946 SUDHL4_400M_050219_2,6946,AIVDKVPSV False True AIVDKVPSV 35.75785 464.27891844511 72697464.0 6944.0 ENSG00000181789|ENST00000314797|COPG1 4.518870751063029 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6947 35.763 306.0 254530.0 25 0 11827.0 -1 ICFLMAVNV 9 119 533.7743171411747 1065.5340813491491 2 533.7743408083916 MULTI CID FTMS 0 0 0 6944 202331.390625 0.2492253717765107 -8 0.3157005310058594 3 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FLMAVNV_ ENSG00000103335|ENST00000301015|PIEZO1 23.1484247019978 0.2366544122328345 6 {[VA]|[{I|L}G]}[VS]DTYVNV 10 -1 + 54.135 0.0 0.0 5.0805 5.0805 75.608 0.0 0.0 0.0 0.7918124604762511 14.14651886415512 0.7918124604762511 0.7918124604762511 0 0.9247425010840048 1.2218487496163564 0.805462187404089 0.0 {[VA]|[{I|L}G]}[VS]DTYVNV;{NN|[MP]|[D{I|L}]|[EV]}KDTYVNV;[TA][{I|L}A]DTYVNV;{[VA]|[{I|L}G]}[VS]DTYVGGV;[PA]{M(Oxidation (M))|F}RTYVNV;{NN|[MP]|[D{I|L}]|[EV]}KDTYVGGV;[VS]{[VA]|[{I|L}G]}DTYVNV;{[QN]|[E{I|L}]|[KN]}[QT]TYVNV;[TA][{I|L}A]DTYVGGV;[PA]{M(Oxidation (M))|F}RTYVGGV 5.0805;5.0062;4.2593;4.2204;4.2051;4.142;4.0019;3.6943;3.3992;3.341 -;-;-;-;-;-;-;-;-;- 536 1 1.541 67874.7 1.0 1723 5222 6944 SUDHL4_400M_050219_2,6947 SUDHL4_400M_050219_2,6947,ICFLMAVNV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6949 35.772 343.0 217500.0 25 0 18499.0 + 33740 SLAESLDQA 9 113 467.2299426578204 932.4453323824408 2 467.2297241091728 MULTI CID FTMS 0 0 0 6948 166817.90625 0.9179600246351988 -1 0.0264396667480468 1 Unmodified _SLAESLDQA_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 52.268347100219714 0.0353964759249114 6 {[TV]|[{I|L}S]}AE 4 5 27.396 0.0 0.0 2.9381 0.0 0.0 0.0 529.2252145448033 529.2252145448033 12.703037561203844 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.5 0.0 + {[TV]|[{I|L}S]}AE 2.9381 + + 257 1 1.541 60203.8 1.0 1724 5223 6948 SUDHL4_400M_050219_2,6949 SUDHL4_400M_050219_2,6949,SLAESLDQA True True SLAESLDQA 35.772183 467.229724109173 926370.25 6948.0 nc|ENSG00000083520|Q9Y2L1-2|DIS3;;ENSG00000083520|ENST00000377767|DIS3 1.9881561001141863 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6950 35.781 481.0 184140.0 25 0 22576.0 + 18584 SVIPPRTEL 9 99 506.29519084048906 1010.575828747778 2 506.2953674197197 MULTI CID FTMS 0 0 0 6948 145413.71875 0.3496898831638869 8 -0.0989036560058593 2 Unmodified _LADGNKLLAP_ ENST00000489982.1_1_10:98363615-98369622:-|nuORF;nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;ENSG00000155629|ENST00000339364|PIK3AP1 27.628801355627647 0.3479284626772844 6 [VS]{I|L}{I|L}W{I|L}D 7 9 55.89 0.0 0.0 5.5305 0.0 0.0 0.0 181.09861169986564 181.09861169986564 39.94804792093738 0.0 0.0 0.0 0 0.9247425010840048 1.6989700043360187 0.3807196863200844 0.0 [VS]{I|L}{I|L}W{I|L}D 5.5305 - 157 + 1 1.541 71363.1 1.0 1725 5223 6948 SUDHL4_400M_050219_2,6950 SUDHL4_400M_050219_2,6950,LADGNKLLAP False False SVIPPRTEL 35.780688 506.29536741972 3173459.25 6948.0 ENST00000489982.1_1_10:98363615-98369622:-|nuORF;;nc|ENSG00000155629|Q6ZUJ8-3|PIK3AP1;;nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1;;ENSG00000155629|ENST00000339364|PIK3AP1 6.280286471048991 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6951 35.79 533.0 213610.0 25 0 23123.0 + -1 KMDPIISRV 9 118 537.8022192166989 1073.5898855001976 2 537.8027831912041 MULTI CID FTMS 0 0 0 6948 102915.46875 0.0963697803012648 -12 0.4831771850585937 3 Oxidation (M) _KM(Oxidation (M))DPIISRV_ ENSG00000159388|ENST00000290551|BTG2 26.020703789607367 0.2001090068861241 6 K{M(Oxidation (M))|F}DP{I|L}{I|L} 6 -1 46.235 0.0 0.0 4.3066 0.0 0.0 0.0 357.18906580142817 357.18906580142817 24.781381439366186 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.0 K{M(Oxidation (M))|F}DP{I|L}{I|L} 4.3066 + + 146 + 1 1.541 90573.3 1.0 1726 5223 6948 SUDHL4_400M_050219_2,6951 SUDHL4_400M_050219_2,6951,KMDPIISRV False False KMDPIISRV 35.790065 537.802783191204 20866852.5 6948.0 ENSG00000159388|ENST00000290551|BTG2 5.744143009185791 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6954 35.804 428.0 166970.0 25 0 9084.6 + 43206 WAEEGQRVL 9 110 544.2781650318017 1086.5417771304033 2 544.2773315310478 MULTI CID FTMS 0 0 0 6953 78461.6953125 0.7980580589378024 -1 0.0040054321289062 1 Unmodified _WAEEGQRVL_ ENSG00000196155|ENST00000379344|PLEKHG4;ENST00000563969.5_1_16:67314567-67322708:+|nuORF;nc|ENSG00000196155|Q58EX7-2|PLEKHG4 41.8396318013385 0.0653578398400075 6 WAEE 4 5 65.433 0.0 0.0 6.0221 0.0 0.0 0.0 568.3213740571089 568.3213740571089 46.57136260906974 0.0 0.0 0.0 0 0.75 2.0 0.75 0.0 + WAEE 6.0221 + + 415 + 1 1.541 57793.5 1.0 1727 5225 6953 SUDHL4_400M_050219_2,6954 SUDHL4_400M_050219_2,6954,WAEEGQRVL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6955 35.818 800.0 131670.0 25 0 12870.0 + 27456 PIVSVIEPN 9 130 484.276416737616 966.538280542032 2 484.2759582400322 MULTI CID FTMS 0 0 0 6953 129162.03125 0.0573728168350767 11 -0.1488037109375 2 Unmodified _PIVSVIEPN_ REV__ENSG00000165195|ENST00000333590|PIGA 20.453626601364224 0.2830276176381075 6 [VS]GVE 5 -1 23.79 0.0 0.0 2.4614 0.0 0.0 0.0 492.2807481536133 492.2807481536133 7.223075548964775 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 [VS]GVE 2.4614 - 266 1 1.541 81877.0 0.6000000238418579 1728 5225 6953 SUDHL4_400M_050219_2,6955 SUDHL4_400M_050219_2,6955,PIVSVIEPN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6957 35.823 36.0 1654300.0 25 0 224710.0 + 20159 LKPGILPVPK 10 74 531.3577347660307 1060.700916598861 2 531.3578369021416 MULTI CID FTMS 0 0 0 6956 1537307.25 0.5304397137474692 5 -0.0442962646484375 1 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 18.721224879955976 0.5334180411911432 6 K{I|L}AP{I|L}VKD{I|L} 9 -1 78.727 0.0 0.0 7.4221 0.0 0.0 0.0 80.05124078922108 80.05124078922108 49.42979712652914 0.0 0.0 0.0 0 1.8807196863200843 0.0 1.1861818737241734 0.0 K{I|L}AP{I|L}VKD{I|L} 7.4221 - 178 + 1 1.541 51537.3 1.0 1729 5226 6956 SUDHL4_400M_050219_2,6957 SUDHL4_400M_050219_2,6957,LKPGILPVPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6958 35.824 46.0 875640.0 25 0 111100.0 -1 VMDSKIVQV 9 80 517.7808569350582 1033.5471609369165 2 517.7813598513603 MULTI CID FTMS 0 0 0 6956 1035205.0 0.3205209430954999 5 -0.0442962646484375 2 Oxidation (M) _VM(Oxidation (M))DSKIVQV_ ENSG00000025800|ENST00000373625|KPNA6;ENSG00000114030|ENST00000344337|KPNA1;ENSG00000196911|ENST00000368564|KPNA5 18.1463463914782 0.3454829746528889 6 {I|L}V{M(Oxidation (M))|F}VQV 6 -1 27.713 0.0 0.0 2.6813 0.0 0.0 330.1529713361344 0.0 330.1529713361344 0.0 10.723258213371434 0.0 0.0 0 0.5317183090963749 0.0 0.0 0.0 {I|L}V{M(Oxidation (M))|F}VQV 2.6813 - 74 1 1.541 37560.0 1.0 1730 5226 6956 SUDHL4_400M_050219_2,6958 SUDHL4_400M_050219_2,6958,VMDSKIVQV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6961 35.835 205.0 317200.0 25 0 34786.0 -1 KMDPIISRV 9 77 358.87066610935904 1073.590168928277 3 358.8703796267509 MULTI CID FTMS 0 0 0 6960 274079.0 0.4225791910056664 -9 0.1549072265625 1 Oxidation (M) _KM(Oxidation (M))DPIISRV_ ENSG00000159388|ENST00000290551|BTG2 22.774965066869 0.2414061210083823 6 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DP{I|L}{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DP{I|L} + + 20.93 14.297 2.3816 1.9495 1.9495 50.355 0.0 0.0 0.0 0.0 6.63303128443836 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 {[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DP{I|L}{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]} 1.9495 - 63 + 1 1.541 63038.8 1.0 1731 5228 6960 SUDHL4_400M_050219_2,6961 SUDHL4_400M_050219_2,6961,KMDPIISRV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6962 35.841 344.0 230060.0 25 0 37211.0 + 37680 TLNDREYQL 9 108 576.2886533028454 1150.5627536724908 2 576.2887451052666 MULTI CID FTMS 0 0 0 6960 199962.0625 0.7199150879064959 -6 0.0911369323730468 2 Unmodified _TLNDREYQL_ ENSG00000084774|ENST00000264705|CAD 59.36838082759317 0.0264317782606298 6 {[QN]|[E{I|L}]|[KN]}[HV]P[C(Carbamidomethyl (C))S]N[VP] 10 9 + 26.672 0.0 0.0 2.3181 2.3181 68.58 0.0 0.0 0.0 0.5080976176135898 -17.316152555391625 -17.316152555391625 0.7390874094431865 0 0.4247425010840047 1.6989700043360187 0.3054621874040891 0.6747425010840047 {[QN]|[E{I|L}]|[KN]}[HV]P[C(Carbamidomethyl (C))S]N[VP];{[QN]|[E{I|L}]|[KN]}[HV][QT]DN[VP];[YQ][RK][C(Carbamidomethyl (C))S]N[VP];[VP]YY[KG]DN[VP];[{M(Oxidation (M))|F}V][Y{I|L}][KG]DN[VP];[VP]YY[DG]KN[VP];[Q{I|L}][WM][W{M(Oxidation (M))|F}]Q{I|L};[{M(Oxidation (M))|F}V][Y{I|L}][DG]KN[VP] 2.3181;2.2539;0.77267;0.65025;0.51562;0.4972;0.41471;0.36257 -;-;-;-;-;-;-;- 195 1 1.541 63509.1 1.0 1732 5228 6960 SUDHL4_400M_050219_2,6962 SUDHL4_400M_050219_2,6962,TLNDREYQL True True TLNDREYQL 35.840808 576.288745105267 1355050.25 6960.0 ENSG00000084774|ENST00000264705|CAD 6.41788387298584 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6964 35.849 336.0 233630.0 25 0 25339.0 + 40736 VLIDYQRNV 9 82 560.3114215952 1118.6082902572 2 560.3110229372978 MULTI CID FTMS 0 0 0 6963 188812.84375 0.0836565360752024 -11 0.2217750549316406 1 Unmodified _VLIDYQRNV_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF 34.40172386719151 0.1061884637610825 6 V{I|L}{I|L}DYQ 6 3 69.201 0.0 0.0 6.1863 0.0 0.0 0.0 384.1992586725219 384.1992586725219 53.47077769377812 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + V{I|L}{I|L}DYQ 6.1863 + + 148 + 1 1.541 66531.1 1.0 1733 5229 6963 SUDHL4_400M_050219_2,6964 SUDHL4_400M_050219_2,6964,VLIDYQRNV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6965 35.858 514.0 141820.0 25 0 7585.2 + -1 VMYGKVYRI 9 125 382.21052805693176 1143.609754770995 3 382.2103149294853 MULTI CID FTMS 0 0 0 6963 75845.9140625 0.8619639004760199 -1 0.0126686096191406 2 Oxidation (M) _VM(Oxidation (M))YGKVYRI_ nc|ENSG00000163882|P52434-3|POLR2H;ENSG00000163882|ENST00000456318|POLR2H;nc|ENSG00000163882|P52434-4|POLR2H;ENST00000476003.1_1_3:184084469-184086079:+|nuORF 19.361941925380144 0.3125782356748823 6 V{M(Oxidation (M))|F}YGKV[YR]{I|L} 9 -1 + 32.015 0.0 0.0 2.7994 2.7994 70.369 0.0 0.0 0.0 15.02494484393359 0.2456819149073652 0.2456819149073652 1.3628878499787227 0 0.3352587893338913 0.0 0.0 0.0 V{M(Oxidation (M))|F}YGKV[YR]{I|L};Y[{M(Oxidation (M))|F}V]GKV[YR]{I|L};V{M(Oxidation (M))|F}YGK{I|L}[H{I|L}]AP;Y[{M(Oxidation (M))|F}V]GK{I|L}[H{I|L}]AP 2.7994;2.6803;1.528;1.4089 +;-;-;- + 102 + 1 1.541 61991.1 1.0 1734 5229 6963 SUDHL4_400M_050219_2,6965 SUDHL4_400M_050219_2,6965,VMYGKVYRI False False VMYGKVYRI 35.858496 382.210314929485 428851.4375 6963.0 nc|ENSG00000163882|P52434-3|POLR2H;;ENSG00000163882|ENST00000456318|POLR2H;;nc|ENSG00000163882|P52434-4|POLR2H;;ENST00000476003.1_1_3:184084469-184086079:+|nuORF 3.2316123644510903 3.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6968 35.877 712.0 132590.0 25 0 19259.0 37346 TKAVVSPP 8 121 399.7381769109844 0 399.7386657595634 PEAK CID FTMS 0 0 0 6967 58020.80859375 0.37370083135723 -16 0.3838691711425781 1 Unmodified _TKAVVSPP_ chr2:106391513-106413084|44|20.64|0.92|4.48|-|ENST00000304514|RGPD3,RGPD3;ENSG00000015568|ENST00000016946|RGPD5;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000183054|ENST00000329516|RGPD6;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000196862|ENST00000408999|RGPD4;nc|ENSG00000187627|P0DJD0|RGPD1 7.910154910731844 0.5650536163073903 6 V 1 7 3.0989 0.0 0.0 0.3886 0.0 0.0 416.2262489862281 279.1450289361938 695.3712779224219 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.3886 + + 6 + 1 1.541 76562.1 1.0 1735 5231 6967 SUDHL4_400M_050219_2,6968 SUDHL4_400M_050219_2,6968,TKAVVSPP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6969 35.891 800.0 101340.0 25 0 9566.1 + 45183 YQQELEREL 9 109 604.3010796899651 1206.5876064467302 2 604.3016845583916 MULTI CID FTMS 0 0 0 6967 94358.7421875 1.0 0 0.0 2 Unmodified _YQQELEREL_ ENSG00000154723|ENST00000284971|ATP5PF;ENST00000486002.1_1_21:27097498-27107174:-|nuORF;nc|ENSG00000154723|P18859-2|ATP5PF 43.77239144664712 0.0547478964384323 6 E{I|L}EQWS 6 6 46.294 0.0 0.0 3.8367 0.0 0.0 416.23835951972814 0.0 416.23835951972814 0.0 20.803867949479766 0.0 0.0 0 0.8585380453316205 0.0 0.805462187404089 0.4247425010840047 E{I|L}EQWS 3.8367 - 210 1 1.541 62457.0 0.5299999713897705 1736 5231 6967 SUDHL4_400M_050219_2,6969 SUDHL4_400M_050219_2,6969,YQQELEREL True True YQQELEREL 35.891073 604.301684558392 401748.0 6967.0 ENST00000486002.1_1_21:27097498-27107174:-|nuORF;;ENSG00000154723|ENST00000284971|ATP5PF;;nc|ENSG00000154723|P18859-2|ATP5PF 5.866934458414714 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6971 35.896 115.0 375580.0 25 0 24397.0 43543 WWWWIWWQWW 10 59 874.9037657894092 1747.7929786456184 2 875.4047119021416 MULTI CID FTMS 0 0 0 6970 347387.46875 0.2036185319183855 29 -0.7275428771972656 1 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 KQDANN[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]} 10 9 47.396 0.0 0.0 2.7117 0.0 0.0 606.2618275373062 0.0 606.2618275373062 0.0 26.76091259055681 0.0 0.0 0 1.0 0.0 0.0 0.3494850021680094 KQDANN[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.7117 - 346 1 1.541 35097.1 1.0 1737 5232 6970 SUDHL4_400M_050219_2,6971 SUDHL4_400M_050219_2,6971,WWWWIWWQWW False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 6972 35.901 254.0 334200.0 25 0 75455.0 + 30329 RAFDQGADAIY 11 58 613.7932906975691 1225.572028461938 2 613.7927123904228 MULTI CID FTMS 0 0 0 6970 175884.375 0.1174714086742709 -11 0.1887397766113281 2 Unmodified _RAFDQGADAIY_ ENSG00000184076|ENST00000330029|UQCR10;nc|ENSG00000184076|Q9UDW1-2|UQCR10 27.088373467376528 0.4561593585727911 6 DQGADA{I|L}Y 8 3 63.608 0.0 0.0 5.1901 0.0 0.0 374.2052174298844 0.0 374.2052174298844 0.0 56.61867555284239 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.3494850021680094 + DQGADA{I|L}Y 5.1901 + + 319 1 1.541 67310.7 1.0 1738 5232 6970 SUDHL4_400M_050219_2,6972 SUDHL4_400M_050219_2,6972,RAFDQGADAIY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6973 35.908 416.0 116220.0 25 0 9032.8 -1 KMSSCDTF 8 107 496.1964782564119 990.3784035796238 2 496.1964904665947 MULTI CID FTMS 0 0 0 6970 100501.6796875 0.3828134569060548 -7 0.0970001220703125 3 Carbamidomethyl (C),Oxidation (M) _KM(Oxidation (M))SSC(Carbamidomethyl (C))DTF_ ENST00000368750.7_1_1:153065976-153066096:-|nuORF 11.640296217721598 0.738950129755968 6 {M(Oxidation (M))|F} 1 -1 14.604 0.0 0.0 1.4746 0.0 0.0 825.3321216966144 0.0 825.3321216966144 0.0 4.6040937697618745 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.4746 + + 89 + 1 1.541 38818.7 1.0 1739 5232 6970 SUDHL4_400M_050219_2,6973 SUDHL4_400M_050219_2,6973,KMSSCDTF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 6974 35.915 368.0 176590.0 25 0 13246.0 + 1788 ALSEKLARL 9 84 500.810666885795 999.60678083839 2 500.8108093142509 MULTI CID FTMS 0 0 0 6970 92847.1484375 0.4190967321948594 -7 0.0970001220703125 4 Unmodified _ALSEKLARL_ ENSG00000152240|ENST00000282058|HAUS1;nc|ENSG00000152240|Q96CS2-2|HAUS1 43.77239144664712 0.0547478964384323 6 {I|L}ASEK{I|L}RA{I|L} 9 4 + 87.482 0.0 0.0 8.7516 8.7516 91.339 0.0 0.0 0.0 71.6445212351994 8.593313839463207 8.593313839463207 7.257724967479859 0 1.6677353201839438 2.0 0.8494850021680094 0.0 {I|L}ASEK{I|L}RA{I|L};A{I|L}SEK{I|L}RA{I|L};[{I|L}A]S[R{I|L}]Q{[TV]|[{I|L}S]}{I|L} 8.7516;8.0256;4.8131 -;-;- 181 + 1 1.541 53418.4 1.0 1740 5232 6970 SUDHL4_400M_050219_2,6974 SUDHL4_400M_050219_2,6974,ALSEKLARL True True ALSEKLARL 35.915025 500.810809314251 1123272.0 6970.0 nc|ENSG00000152240|Q96CS2-2|HAUS1;;ENSG00000152240|ENST00000282058|HAUS1 4.419424533843994 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6977 35.925 180.0 244040.0 25 0 19111.0 + 11905 GLWRTTPEA 9 69 515.7697297341653 1029.5249065351304 2 515.7693969607353 MULTI CID FTMS 0 0 0 6976 272575.375 0.4344113217722228 -6 0.090972900390625 1 Unmodified _GLWRTTPEA_ ENSG00000104635|ENST00000381237|SLC39A14;nc|ENSG00000104635|Q15043-2|SLC39A14;nc|ENSG00000104635|Q15043-3|SLC39A14 27.22323531849824 0.1848086127304535 6 {[VA]|[{I|L}G]}[WR]TT 6 3 34.13 0.0 0.0 3.3151 0.0 0.0 0.0 312.1210424918601 312.1210424918601 8.187587626244124 0.0 0.0 0.0 0 1.0 2.0 0.3494850021680094 0.0 + {[VA]|[{I|L}G]}[WR]TT 3.3151 + + 108 1 1.541 43429.0 1.0 1741 5234 6976 SUDHL4_400M_050219_2,6977 SUDHL4_400M_050219_2,6977,GLWRTTPEA False True GLWRTTPEA 35.925147 515.769396960735 3293117.25 6976.0 ENSG00000104635|ENST00000381237|SLC39A14;;nc|ENSG00000104635|Q15043-3|SLC39A14;;nc|ENSG00000104635|Q15043-2|SLC39A14 6.71048625310262 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6978 35.939 800.0 164100.0 25 0 14919.0 + -1 VLMEKPDVV 9 159 523.2842366332741 1044.553920333348 2 523.2855712771416 MULTI CID FTMS 0 0 0 6976 115862.359375 0.6678355363833103 -4 0.0606193542480468 2 Oxidation (M) _VLM(Oxidation (M))EKPDVV_ nc|ENSG00000136271|Q9NY93-2|DDX56;ENSG00000136271|ENST00000258772|DDX56 41.95555342248728 0.0647214845423414 6 V{I|L}{M(Oxidation (M))|F}EK[DP]VV 9 -1 + 62.634 0.0 0.0 5.9963 5.9963 89.472 0.0 0.0 0.0 37.13976435688919 12.012131247412512 12.012131247412512 9.827796776480469 0 1.3996498648046138 2.0 0.3054621874040891 0.0 V{I|L}{M(Oxidation (M))|F}EK[DP]VV;V{I|L}{M(Oxidation (M))|F}EK[DV]PV;V{I|L}SAGQWWV;V{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}WPV;V{I|L}SQQWWV;V{I|L}SAHHWPV;V{I|L}{M(Oxidation (M))|F}[VP]WWV;V{I|L}SAG[AG]WWV;V{I|L}SAG{[NV]|[RG]}[CS]PV;V{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}{[DA]|[EG]}PV 5.9963;5.0554;5.0352;4.9358;4.8718;4.3661;4.2624;4.1537;4.114;4.0491 +;-;-;-;-;-;-;-;-;- + 3534 + 1 1.541 108016.1 0.4799999892711639 1742 5234 6976 SUDHL4_400M_050219_2,6978 SUDHL4_400M_050219_2,6978,VLMEKPDVV False False VLMEKPDVV 35.938981 523.285571277142 930012.625 6976.0 nc|ENSG00000136271|Q9NY93-2|DDX56;;ENSG00000136271|ENST00000258772|DDX56 4.829220294952393 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6983 35.957 171.0 342700.0 25 0 74494.0 + -1 ALDKALTSV 9 70 459.28077179211954 458.2734953255196 1 459.2800781130791 MULTI CID FTMS 0 0 0 6982 122237.90625 0.2337486766675423 9 -0.2247123718261718 1 ENSG00000108094|ENST00000374749|CUL2;nc|ENSG00000108094|Q13617-2|CUL2 6 SV 2 -1 13.544 0.0 0.0 2.9555 0.0 0.0 254.161982119268 0.0 254.161982119268 0.0 6.197887582883938 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 SV 2.9555 - 16 + 1 1.541 49718.6 1.0 1743 5238 6982 SUDHL4_400M_050219_2,6983 SUDHL4_400M_050219_2,6983, False False ALDKALTSV 35.956878 459.280078113079 1269483.25 6982.0 ENSG00000108094|ENST00000374749|CUL2;;nc|ENSG00000108094|Q13617-2|CUL2 2.9127339522043862 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6984 35.971 800.0 23234.0 25 0 3946.2 + 13304 HKEVWMRPLY 10 38 679.85599874792 1357.69744456264 2 679.8560058474541 MULTI CID FTMS 0 0 0 6982 46716.234375 0.5781721678649882 1 -0.0335502624511718 2 Unmodified _HKEVWMRPLY_ REV__ENSG00000102699|ENST00000381989|PARP4 2.735195868890462 0.713984610296514 6 W 1 -1 8.8515 0.0 0.0 0.65195 0.0 0.0 678.3465056972087 490.2440889947876 1168.5905946919963 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 W 0.65195 + + 4 + 1 1.541 29337.7 0.449999988079071 1744 5238 6982 SUDHL4_400M_050219_2,6984 SUDHL4_400M_050219_2,6984,HKEVWMRPLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6985 35.985 800.0 74402.0 25 0 5794.8 -1 0 62 909.413427554 1816.8123021748 2 909.4149047732352 MULTI CID FTMS 0 0 0 6982 83246.0625 0.5469398305905145 -9 0.110198974609375 3 6 [NP]{I|L}N{M(Oxidation (M))|F}[PS][YN]AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 53.07 0.0 0.0 2.921 2.921 83.92 0.0 0.0 0.0 0.6863623584101219 39.25759390300961 0.6863623584101219 53.06987521229523 0 0.5 0.0 0.0 0.4247425010840047 [NP]{I|L}N{M(Oxidation (M))|F}[PS][YN]AN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 2.921 - 234 1 1.541 45762.8 0.4099999964237213 1745 5238 6982 SUDHL4_400M_050219_2,6985 SUDHL4_400M_050219_2,6985, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6987 35.992 172.0 237090.0 25 0 15200.0 + 12170 GQPDISRPF 9 60 508.7611555746713 1015.5077582161424 2 508.7615539431572 MULTI CID FTMS 0 0 0 6986 171887.265625 0.7783226984305323 -4 0.0455818176269531 1 Unmodified _GQPDISRPF_ ENSG00000102786|ENST00000311234|INTS6;ENST00000504674.1_1_5:39720798-39721572:-|nuORF;nc|ENSG00000102786|Q9UL03-3|INTS6 16.149105407346934 0.3995459350917656 6 {[QG]|[NA]}PD{I|L}A[R{M(Oxidation (M))|F}]{I|L} 9 3 + 32.33 0.0 0.0 3.1836 3.1836 82.872 0.0 0.0 0.0 12.40803747765064 2.6760624017703165 2.6760624017703165 20.000000000000004 0 0.4247425010840047 0.0 0.0 0.0 {[QG]|[NA]}PD{I|L}A[R{M(Oxidation (M))|F}]{I|L};{[QG]|[NA]}P[NP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{M(Oxidation (M))|F};{[QG]|[NA]}P[NP]Y{[QN]|[E{I|L}]|[KN]}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T[HV][R{M(Oxidation (M))|F}]{I|L} 3.1836;1.2141;1.0065;0.57741 -;-;-;- 70 + 1 1.541 38422.7 1.0 1746 5239 6986 SUDHL4_400M_050219_2,6987 SUDHL4_400M_050219_2,6987,GQPDISRPF False True GQPDISRPF 35.991782 508.761553943157 9246836.25 6986.0 ENSG00000102786|ENST00000311234|INTS6;;nc|ENSG00000102786|Q9UL03-3|INTS6;;ENST00000504674.1_1_5:39720798-39721572:-|nuORF 6.260550181070964 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6988 36.006 800.0 148480.0 25 0 24746.0 -1 0 79 674.6914141602688 2021.0524130810063 3 674.6925536990166 MULTI CID FTMS 0 0 0 6986 77420.390625 0.691108333761652 -1 0.0335502624511718 2 6 KPTGAR 6 -1 37.868 0.0 0.0 1.8737 0.0 0.0 1024.482807713647 383.1929190456245 1407.6757267592714 0.0 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 KPTGAR 1.8737 - 289 + 1 1.541 95837.5 0.4699999988079071 1747 5239 6986 SUDHL4_400M_050219_2,6988 SUDHL4_400M_050219_2,6988, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6989 36.019 800.0 207320.0 25 0 43957.0 + 8857 EYVSSQLGRP 10 118 568.2923784865161 1134.570204039832 2 568.2920410037041 MULTI CID FTMS 0 0 0 6986 106776.453125 0.5875898610486173 -4 0.0455818176269531 3 Unmodified _EYVSSQLGRP_ REV__ENSG00000105549|ENST00000342640|THEG;REV__nc|ENSG00000105549|Q9P2T0-2|SPMAP2 22.736283301280096 0.4578556481593033 6 STESTNG{I|L}RP 10 -1 57.516 0.0 0.0 5.0695 0.0 0.0 74.07063319715719 0.0 74.07063319715719 0.0 44.24024714504206 0.0 0.0 0 0.0 0.0 1.4916440611282624 0.3494850021680094 STESTNG{I|L}RP 5.0695 - 1490 + 1 1.541 127361.9 0.5199999809265137 1748 5239 6986 SUDHL4_400M_050219_2,6989 SUDHL4_400M_050219_2,6989,EYVSSQLGRP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 6990 36.033 800.0 77149.0 25 0 2957.3 -1 0 77 845.7122199816794 2534.114830545238 3 846.0475952029228 MULTI CID FTMS 0 0 0 6986 116790.7578125 1.0 0 0.0 4 6 DVYYES[WP]{I|L}S 10 -1 35.406 0.0 0.0 1.3972 0.0 0.0 652.2120602267229 639.3217867486936 1291.5338469754165 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 DVYYES[WP]{I|L}S 1.3972 - 175 + 1 1.541 51298.8 0.4799999892711639 1749 5239 6986 SUDHL4_400M_050219_2,6990 SUDHL4_400M_050219_2,6990, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 6992 36.038 32.0 1799600.0 25 0 369340.0 + 1305 AIVDKVPSV 9 59 464.2791342711911 926.5437156091822 2 464.2791015505791 MULTI CID FTMS 0 0 0 6991 1814985.0 0.6946459481856817 -6 0.11419677734375 1 Unmodified _AIVDKVPSV_ ENSG00000181789|ENST00000314797|COPG1 24.020572477871973 0.2255576514309169 6 [{I|L}A]V{[QD]|[EN]|[WG]|[KD]|[RS]}VPSV 9 0 + 42.118 0.0 0.0 4.5457 4.5457 87.919 0.0 0.0 0.0 25.64667259123027 7.412669627871864 7.412669627871864 42.11766954431866 0 0.4247425010840047 2.0 0.0 0.0 + + [{I|L}A]V{[QD]|[EN]|[WG]|[KD]|[RS]}VPSV 4.5457 + + 81 + 1 1.541 49326.9 1.0 1750 5240 6991 SUDHL4_400M_050219_2,6992 SUDHL4_400M_050219_2,6992,AIVDKVPSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6993 36.042 214.0 204890.0 25 0 8921.2 + -1 KLNDTYVNV 9 93 533.7743171411747 1065.5340813491491 2 533.7745239138603 MULTI CID FTMS 0 0 0 6991 196331.3125 0.2418346663759693 10 -0.2211799621582031 2 Carbamidomethyl (C) _IC(Carbamidomethyl (C))FLMAVNV_ ENSG00000166881|ENST00000300128|NEMP1 13.50788311687929 0.4710407108020397 6 DTYVNV 6 -1 27.457 0.0 0.0 2.5769 0.0 0.0 356.2060719220719 0.0 356.2060719220719 0.0 14.983193732736034 0.0 0.0 0 0.6677353201839438 0.0 0.7302046884880937 0.0 DTYVNV 2.5769 - 209 1 1.541 41852.3 1.0 1751 5240 6991 SUDHL4_400M_050219_2,6993 SUDHL4_400M_050219_2,6993,ICFLMAVNV False False KLNDTYVNV 36.042161 533.77452391386 0.0 6991.0 ENSG00000166881|ENST00000300128|NEMP1 3.3923136393229165 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6994 36.048 342.0 206030.0 25 0 39242.0 + + 43595 YAEVGRVL 8 78 453.7569524790706 905.4993520249412 2 453.7555724978447 MULTI CID FTMS 0 0 0 6991 110462.3125 0.4514234331660904 -5 0.0943336486816406 3 Unmodified _YAEVRGLV_ nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;nc|ENSG00000132466|O75179-7|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000132466|O75179-2|ANKRD17;ENSG00000132466|ENST00000358602|ANKRD17 34.10243960390752 0.3329570729325616 6 YAEV 4 -1 62.423 0.0 0.0 6.8937 0.0 0.0 0.0 440.2622469537719 440.2622469537719 51.16369046023241 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 YAEV 6.8937 + + 58 + 1 1.541 61468.1 1.0 1752 5240 6991 SUDHL4_400M_050219_2,6994 SUDHL4_400M_050219_2,6994,YAEVRGLV False False YAEVGRVL 36.048345 453.755572497845 2403411.0 6991.0 nc|ENSG00000131503|Q8IWZ3-4|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;;ENST00000514252.1_1_4:73978989-74017230:-|nuORF;;nc|ENSG00000132466|O75179-7|ANKRD17;;nc|ENSG00000132466|O75179-6|ANKRD17;;ENSG00000131503|ENST00000360839|ANKHD1;;nc|ENSG00000132466|O75179-2|ANKRD17;;ENSG00000132466|ENST00000358602|ANKRD17 2.2280658880869546 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6996 36.053 65.0 872190.0 25 0 110660.0 -1 KMDPIISRV 9 67 537.8022192166989 1073.5898855001976 2 537.8024780154228 MULTI CID FTMS 0 0 0 6995 774044.5625 0.7248133379513333 6 -0.1273612976074218 1 Oxidation (M) _KM(Oxidation (M))DPIISRV_ ENSG00000159388|ENST00000290551|BTG2 28.49450938151212 0.1686335738423394 6 K{M(Oxidation (M))|F}DV 4 -1 41.414 0.0 0.0 3.8576 0.0 0.0 0.0 581.3417452447874 581.3417452447874 21.237125054200234 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 K{M(Oxidation (M))|F}DV 3.8576 - 47 + 1 1.541 48771.9 1.0 1753 5241 6995 SUDHL4_400M_050219_2,6996 SUDHL4_400M_050219_2,6996,KMDPIISRV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6997 36.059 328.0 192730.0 25 0 32984.0 + 37772 TLSAVPSSAL 10 77 473.2666958408686 944.5188387485372 2 473.2660705447197 MULTI CID FTMS 0 0 0 6995 92754.75 0.4701641625265404 -3 0.09735107421875 2 Unmodified _TLSAVPSSAL_ ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5-3|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1 14.838274106304384 0.5985701837916485 6 [KG]AS{[WN]|[YH]}VA{I|L} 9 7 [KG]AS{[WN]|[YH]}V + + 22.959 2.9757 0.40083 2.4307 2.4307 50.825 0.0 0.0 0.0 0.0 12.501225267834 0.0 0.0 0 0.5 0.0 0.0 0.0 [KG]AS{[WN]|[YH]}VA{I|L} 2.4307 - 244 + 1 1.541 52620.9 1.0 1754 5241 6995 SUDHL4_400M_050219_2,6997 SUDHL4_400M_050219_2,6997,TLSAVPSSAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6998 36.062 160.0 334200.0 25 0 19771.0 + 30813 RIIDTVAQV 9 81 507.8005295229851 1013.5865061127702 2 507.8006469607353 MULTI CID FTMS 0 0 0 6995 180325.21875 0.2299879370468969 -5 0.1054878234863281 3 Unmodified _RIIDTVAQV_ ENSG00000102699|ENST00000381989|PARP4 41.95555342248728 0.0647214845423414 6 DTVAQV 6 3 54.513 0.0 0.0 5.3783 0.0 0.0 382.2682972638688 0.0 382.2682972638688 0.0 32.11758134947864 0.0 0.0 0 0.9559771852360796 0.0 0.3807196863200844 0.0 + DTVAQV 5.3783 + + 232 1 1.541 47240.7 1.0 1755 5241 6995 SUDHL4_400M_050219_2,6998 SUDHL4_400M_050219_2,6998,RIIDTVAQV True True RIIDTVAQV 36.062244 507.800646960735 7667680.5 6995.0 ENSG00000102699|ENST00000381989|PARP4 5.065432707468669 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 6999 36.067 244.0 259180.0 25 0 45464.0 + 1809 ALTAAATLSV 10 80 459.2679909306713 916.5214289281428 2 459.2645751833916 MULTI CID FTMS 0 0 0 6995 69870.53125 0.7770025885814843 -2 0.0638008117675781 4 Unmodified _ALTAAATLSV_ ENSG00000100084|ENST00000263208|HIRA;ENST00000509549.5_1_22:19341546-19435194:-|nuORF 20.453626601364224 0.5043500229302764 6 [{I|L}A]S 3 7 29.181 0.0 0.0 3.1839 0.0 0.0 0.0 642.3400362604124 642.3400362604124 16.306423891230395 0.0 0.0 0.0 0 0.3494850021680094 1.5228787452803376 0.0 0.0 [{I|L}A]S 3.1839 - 47 + 1 1.541 54841.9 1.0 1756 5241 6995 SUDHL4_400M_050219_2,6999 SUDHL4_400M_050219_2,6999,ALTAAATLSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7002 36.076 130.0 544390.0 25 0 58880.0 + 20160 LKPGILPVPK 10 79 531.3577347660307 1060.700916598861 2 531.3576537966728 MULTI CID FTMS 0 0 0 7001 499848.15625 0.1724699554486913 22 -0.7326164245605469 1 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 19.62595529434964 0.5182375435722777 6 K{I|L}A[{I|L}P]VKD{I|L} 9 -1 58.496 0.0 0.0 5.5149 0.0 0.0 0.0 80.05118738345936 80.05118738345936 40.163800089887545 0.0 0.0 0.0 0 1.8252574989159955 0.0 0.7134679910804405 0.0 K{I|L}A[{I|L}P]VKD{I|L} 5.5149 - 156 + 1 1.541 59237.7 1.0 1757 5243 7001 SUDHL4_400M_050219_2,7002 SUDHL4_400M_050219_2,7002,LKPGILPVPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7003 36.086 591.0 131310.0 25 0 12886.0 + 17066 KLDEDVKMI 9 100 553.7918526216422 1105.5691523100843 2 553.7922851443291 MULTI CID FTMS 0 0 0 7001 82959.2890625 0.4281601601614517 -2 0.0225028991699218 2 Oxidation (M) _KLDEDVKM(Oxidation (M))I_ ENSG00000066136|ENST00000447388|NFYC;ENST00000437925.1_1_9:89699796-89699949:-|nuORF;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;nc|ENSG00000066136|Q13952|NFYC 61.60191391372663 0.0251951588191061 6 {I|L}KVK{M(Oxidation (M))|F}{I|L} 6 4 47.657 0.0 0.0 4.3106 0.0 0.0 359.09672743965 0.0 359.09672743965 0.0 26.90859119031081 0.0 0.0 0 1.531234684152075 0.0 0.0 0.3494850021680094 {I|L}KVK{M(Oxidation (M))|F}{I|L} 4.3106 - 590 1 1.541 62842.0 1.0 1758 5243 7001 SUDHL4_400M_050219_2,7003 SUDHL4_400M_050219_2,7003,KLDEDVKMI True False KLDEDVKMI 36.086434 553.792285144329 743128.6875 7001.0 ENSG00000066136|ENST00000447388|NFYC;;ENST00000467203.5_1_1:41157373-41224011:+|nuORF;;nc|ENSG00000066136|Q13952|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC;;nc|ENSG00000066136|Q13952-3|NFYC;;nc|ENSG00000066136|Q13952-7|NFYC;;nc|ENSG00000066136|Q13952-5|NFYC;;ENST00000437925.1_1_9:89699796-89699949:-|nuORF 5.451697031656901 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7004 36.093 377.0 146880.0 25 0 13379.0 + 2943 AVHEDIVAV 9 72 476.7583425316788 951.5021321301576 2 476.7588073611259 MULTI CID FTMS 0 0 0 7001 114768.125 0.9957583246192256 1 -0.03619384765625 3 Unmodified _AVHEDIVAV_ ENSG00000083520|ENST00000377767|DIS3;nc|ENSG00000083520|Q9Y2L1-2|DIS3 36.04419817259434 0.0971720506436186 6 {[VA]|[{I|L}G]}HED{I|L}VAV 9 0 + 44.803 0.0 0.0 4.7087 4.7087 87.521 0.0 0.0 0.0 14.850680276396346 29.31881028251468 14.850680276396346 23.029644954411804 0 0.8182503180159344 1.2218487496163564 0.0 0.0 + + {[VA]|[{I|L}G]}HED{I|L}VAV;{[VA]|[{I|L}G]}H[PA][C(Carbamidomethyl (C))K]AV;[VP]YYAAVAV 4.7087;2.2884;1.4224 +;-;- + 105 1 1.541 48678.9 1.0 1759 5243 7001 SUDHL4_400M_050219_2,7004 SUDHL4_400M_050219_2,7004,AVHEDIVAV True True AVHEDIVAV 36.093224 476.758807361126 624449.1875 7001.0 nc|ENSG00000083520|Q9Y2L1-2|DIS3;;ENSG00000083520|ENST00000377767|DIS3 7.535405953725179 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7005 36.107 800.0 115090.0 25 0 11024.0 + 6252 DTNADKQLSF 10 132 569.7722493579521 1137.529945782704 2 569.7722656130791 MULTI CID FTMS 0 0 0 7001 92251.0078125 0.9720309545012492 -1 0.0040626525878906 4 Unmodified _DTNADKQLSF_ ENSG00000163220|ENST00000368738|S100A9 47.7319792270244 0.0934623409360514 6 {[QN]|[E{I|L}]|[KN]}{I|L}[WQ]C{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 9 6 + 29.697 0.0 0.0 2.6107 2.6107 70.676 0.0 0.0 0.0 1.5129995961990623 11.008209192124134 1.5129995961990623 1.7609125905568137 0 0.5 0.585026652029182 0.3494850021680094 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}[WQ]C{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}{I|L}{[C(Carbamidomethyl (C))E]|[WC]}Q{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}W[Q{I|L}]C{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[ES]|[DT]|[{I|L}C]}N[WK]Q{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}W{[ES]|[DT]|[{I|L}C]}Q{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}DRRC{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}{I|L}T{[QG]|[NA]}DE{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}{I|L}T{[WN]|[YH]}E{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}D{[WT]|[RM]}Q{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]};{[QN]|[E{I|L}]|[KN]}{I|L}{[C(Carbamidomethyl (C))E]|[WC]}[AG]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]} 2.6107;2.4559;2.346;2.2953;2.1912;1.9962;1.9716;1.9266;1.8414;1.6464 -;-;-;-;-;-;-;-;-;- 745 1 1.541 72193.9 0.4799999892711639 1760 5243 7001 SUDHL4_400M_050219_2,7005 SUDHL4_400M_050219_2,7005,DTNADKQLSF True True DTNADKQLSF 36.107057 569.772265613079 521665.03125 7001.0 ENSG00000163220|ENST00000368738|S100A9 6.252537568410237 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7007 36.112 38.0 1158100.0 25 0 148490.0 + 40737 VLIDYQRNV 9 48 560.3114215952 1118.6082902572 2 560.3115722537041 MULTI CID FTMS 0 0 0 7006 1212177.5 0.5370745376440988 4 -0.0992851257324218 1 Unmodified _VLIDYQRNV_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF 27.628801355627647 0.1796483985696185 6 V{I|L}{I|L}DYQ 6 3 72.652 0.0 0.0 6.4948 0.0 0.0 0.0 384.1997164361938 384.1997164361938 65.20426282903784 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 + V{I|L}{I|L}DYQ 6.4948 + + 71 + 1 1.541 40575.3 1.0 1761 5244 7006 SUDHL4_400M_050219_2,7007 SUDHL4_400M_050219_2,7007,VLIDYQRNV False True VLIDYQRNV 36.111846 560.311572253704 23185614.0 7006.0 ENST00000492182.5_1_2:61710065-61713073:-|nuORF;;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;;ENSG00000082898|ENST00000401558|XPO1;;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 5.508324940999349 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7008 36.115 179.0 359930.0 25 0 44213.0 + 39093 TWAELVRLS 9 73 358.87066610935904 1073.590168928277 3 358.8704406619072 MULTI CID FTMS 0 0 0 7006 273449.5625 0.4216087146483437 7 -0.2192497253417968 2 Unmodified _TWAELVRLS_ REV__ENST00000367619.7_1_1:179320581-179322808:+|nuORF 16.149105407346934 0.3995459350917656 6 {[TV]|[{I|L}S]}[CS]P{I|L}{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]} 10 -1 {[TV]|[{I|L}S]}[CS]P + + 28.812 -7.6243 -1.5649 2.6837 2.6837 51.174 0.0 0.0 0.0 0.0 24.83288122256525 0.0 0.0 0 0.8494850021680094 0.0 0.3494850021680094 0.0 {[TV]|[{I|L}S]}[CS]P{I|L}{I|L}V{[QD]|[EN]|[WG]|[KD]|[RS]} 2.6837 - 65 + 1 1.541 58900.5 1.0 1762 5244 7006 SUDHL4_400M_050219_2,7008 SUDHL4_400M_050219_2,7008,TWAELVRLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7009 36.118 133.0 345700.0 25 0 28790.0 -1 HAVFPTSSM 9 86 496.7287494618379 991.4429459904758 2 496.7292968630791 MULTI CID FTMS 0 0 0 7006 203139.328125 0.5885304146456599 -6 0.1560478210449218 3 Oxidation (M) _HAVFPTSSM(Oxidation (M))_ ENSG00000075340|ENST00000264436|ADD2;nc|ENSG00000075340|P35612-2|ADD2;nc|ENSG00000075340|P35612-3|ADD2;nc|ENSG00000075340|P35612-4|ADD2;nc|ENSG00000075340|P35612-5|ADD2;nc|ENSG00000075340|P35612-6|ADD2;nc|ENSG00000075340|P35612-8|ADD2;nc|ENSG00000075340|P35612-9|ADD2 32.116972079565 0.1225432171549407 6 S{M(Oxidation (M))|F} 2 -1 19.508 0.0 0.0 1.9677 0.0 0.0 739.3649563437946 0.0 739.3649563437946 0.0 -3.345078002212894 -3.345078002212894 0.0 0 0.0 0.0 0.3054621874040891 0.0 S{M(Oxidation (M))|F} 1.9677 + + 64 + 1 1.541 40518.1 1.0 1763 5244 7006 SUDHL4_400M_050219_2,7009 SUDHL4_400M_050219_2,7009,HAVFPTSSM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7010 36.131 753.0 173430.0 25 0 24210.0 + 9277 FIAPSGHGL 9 123 449.74394903731815 897.4733451414363 2 449.7425109744072 MULTI CID FTMS 0 0 0 7006 124171.671875 0.3241086935172282 -5 0.12249755859375 4 Unmodified _FIAPSGHGL_ ENSG00000122545|ENST00000350320|SEPTIN7;ENST00000398921.6_1_7:45788229-45798731:-|nuORF;ENST00000425198.1_1_7:35872473-35938044:+|nuORF;nc|ENSG00000122545|Q16181-2|SEPTIN7 56.541270873467816 0.0279970378729908 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APSGHG{I|L} 9 0 + 37.441 0.0 0.0 4.1718 4.1718 78.885 0.0 0.0 0.0 20.281648544107405 1.277271537757947 1.277271537757947 6.278496805591949 0 0.7302046884880937 0.0 1.1237125054200234 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APSGHG{I|L};[VS][WP]PA{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APS[HN]{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AP[WP]AP;{[HG]|PP}S[TA]{I|L}A{[QN]|[E{I|L}]|[KN]};{[HG]|PP}SPAVA{M(Oxidation (M))|F}{I|L};{[HG]|PP}SPAG{I|L}{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{I|L}[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F};{[HG]|PP}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}A{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}{I|L} 4.1718;3.4722;3.291;2.9166;2.0956;1.9617;1.7655;1.2383;1.2198;1.1125 +;-;-;-;-;-;-;-;-;- + 281 + 1 1.541 104719.9 1.0 1764 5244 7006 SUDHL4_400M_050219_2,7010 SUDHL4_400M_050219_2,7010,FIAPSGHGL True True FIAPSGHGL 36.131044 449.742510974407 1738686.875 7006.0 nc|ENSG00000122545|Q16181-2|SEPTIN7;;ENST00000398921.6_1_7:45788229-45798731:-|nuORF;;ENSG00000122545|ENST00000350320|SEPTIN7;;ENST00000425198.1_1_7:35872473-35938044:+|nuORF 5.056845188140869 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7011 36.145 800.0 120180.0 25 0 26803.0 -1 0 61 690.4631859076273 689.4559094410273 1 690.4634887576103 MULTI CID FTMS 0 0 0 7006 150997.078125 0.1033142823982924 19 -0.6334991455078125 5 6 [K{I|L}]WD 4 -1 16.995 0.0 0.0 2.465 0.0 0.0 0.0 144.1481570525555 144.1481570525555 13.499934467764874 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [K{I|L}]WD 2.465 - 33 1 1.541 83551.9 0.6100000143051147 1765 5244 7006 SUDHL4_400M_050219_2,7011 SUDHL4_400M_050219_2,7011, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7013 36.153 286.0 215810.0 25 0 19093.0 + + 27492 RMIDIQTRM 9 106 399.7381769109844 0 399.7381469607353 PEAK CID FTMS 0 0 0 7012 105432.0625 0.6790675683930679 -2 0.0740127563476562 1 Unmodified _PKGVLSTP_ nc|ENSG00000071462|O43709-2|BUD23;ENSG00000071462|ENST00000265758|BUD23;nc|ENSG00000071462|O43709-3|BUD23;ENST00000463307.5_1_7:73097949-73107126:+|nuORF 4.75600775471527 0.5825752635465162 6 T 1 -1 5.1057 0.0 0.0 0.64025 0.0 0.0 439.2651962576745 254.1260775201781 693.3912737778527 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 T 0.64025 + + 11 + 1 1.541 54430.8 1.0 1766 5245 7012 SUDHL4_400M_050219_2,7013 SUDHL4_400M_050219_2,7013,PKGVLSTP False False RMIDIQTRM 36.152673 399.738146960735 5582144.5 7012.0 nc|ENSG00000071462|O43709-2|BUD23;;ENSG00000071462|ENST00000265758|BUD23;;nc|ENSG00000071462|O43709-3|BUD23;;ENST00000463307.5_1_7:73097949-73107126:+|nuORF 5.028466780980428 3.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7014 36.159 338.0 158820.0 25 0 9453.2 + 10199 FQHTGIYSV 9 97 526.2637718674181 1050.512990801636 2 526.2631713747978 MULTI CID FTMS 0 0 0 7012 93418.1640625 0.932288294202516 -1 0.0378189086914062 2 Unmodified _FQHTGIYSV_ ENSG00000187688|ENST00000338560|TRPV2;ENST00000583241.1_1_17:16331654-16335285:+|nuORF 21.53697664764585 0.2571576504437394 6 [QA]QV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YW 8 7 + 28.898 0.0 0.0 2.7509 2.7509 68.658 0.0 0.0 0.0 0.304820066534166 7.074484699911562 0.304820066534166 0.304820066534166 0 0.5 0.0 0.0 0.3807196863200844 [QA]QV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{I|L}{[SA]|[TG]}YW;AAGQV{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YW;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}H{[SA]|[TG]}{I|L}YW;[EP]W{I|L}{[SA]|[TG]}YSV;[QA]Q{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}YW;[QA][AG]V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YW;AAGQ{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}YW;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YK]{[SA]|[TG]}YSV;[HT]G{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}YW 2.7509;2.7219;2.5173;2.1579;2.0484;2.0139;1.8692;1.7803;1.7248;1.7037 -;-;-;-;-;-;-;-;-;- 235 1 1.541 48273.7 1.0 1767 5245 7012 SUDHL4_400M_050219_2,7014 SUDHL4_400M_050219_2,7014,FQHTGIYSV False True FQHTGIYSV 36.15881 526.263171374798 458714.5 7012.0 ENST00000583241.1_1_17:16331654-16335285:+|nuORF;;ENSG00000187688|ENST00000338560|TRPV2 3.731422662734986 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7016 36.165 77.0 711930.0 25 0 94670.0 + 30330 RAFDQGADAIY 11 51 613.7932906975691 1225.572028461938 2 613.7936889529228 MULTI CID FTMS 0 0 0 7015 605725.0625 0.4045576894547104 3 -0.0515518188476562 1 Unmodified _RAFDQGADAIY_ ENSG00000184076|ENST00000330029|UQCR10;nc|ENSG00000184076|Q9UDW1-2|UQCR10 22.774965066869 0.5574395181959457 6 QGADA{I|L}Y 7 4 61.714 0.0 0.0 5.0355 0.0 0.0 489.23211274649327 0.0 489.23211274649327 0.0 50.91206360493317 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 + QGADA{I|L}Y 5.0355 + + 137 1 1.541 45811.7 1.0 1768 5246 7015 SUDHL4_400M_050219_2,7016 SUDHL4_400M_050219_2,7016,RAFDQGADAIY False True RAFDQGADAIY 36.164512 613.793688952923 15347130.0 7015.0 ENSG00000184076|ENST00000330029|UQCR10;;nc|ENSG00000184076|Q9UDW1-2|UQCR10 8.207865397135416 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7017 36.17 313.0 219140.0 25 0 16898.0 43544 WWWWIWWQWW 10 70 874.9037657894092 1747.7929786456184 2 875.3992187380791 MULTI CID FTMS 0 0 0 7015 152965.484375 0.0896595593234744 43 -1.4874114990234375 2 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.4583401331227399 0.7245164002484112 6 [NP]{I|L}N[HC][{I|L}A]DANNNP{[QN]|[E{I|L}]|[KN]} 16 15 + 70.949 0.0 0.0 4.0593 4.0593 74.223 0.0 0.0 0.0 7.3688000063343395 48.519002886849975 7.3688000063343395 1.9382002601611248 0 0.5 1.0457574905606752 0.3807196863200844 1.4674165578762486 [NP]{I|L}N[HC][{I|L}A]DANNNP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[{M(Oxidation (M))|F}E][YV]DANNNP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N[HC][{I|L}A]DAD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N[HC][{I|L}A]DANNPN{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[{M(Oxidation (M))|F}E][YV]DANNPN{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N[HC][{I|L}A]DAD{I|L}PN{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[{M(Oxidation (M))|F}E][YV]WNNNP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}[{M(Oxidation (M))|F}E][YV]DAD{I|L}PN{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N[HC][{I|L}A]WNNNP{[QN]|[E{I|L}]|[KN]} 4.0593;3.9485;3.9455;3.8346;3.7408;3.6299;3.6269;3.5657;3.516;3.4576 -;-;-;-;-;-;-;-;-;- 1151 1 1.541 51047.9 1.0 1769 5246 7015 SUDHL4_400M_050219_2,7017 SUDHL4_400M_050219_2,7017,WWWWIWWQWW False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 7018 36.173 125.0 464210.0 25 0 49747.0 + 44367 YLSEKVLAA 9 103 497.2841212817356 992.5536896302712 2 497.2845336794853 MULTI CID FTMS 0 0 0 7015 314455.46875 1.0 0 0.0 3 Unmodified _YLSEKVLAA_ ENSG00000184432|ENST00000333188|COPB2;nc|ENSG00000184432|P35606-2|COPB2 14.838274106304384 0.4350285940865338 6 [Y{I|L}]S 3 6 30.942 0.0 0.0 3.1174 0.0 0.0 0.0 626.3553560846311 626.3553560846311 12.972412783700156 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + [Y{I|L}]S 3.1174 + + 158 + 1 1.541 49963.8 1.0 1770 5246 7015 SUDHL4_400M_050219_2,7018 SUDHL4_400M_050219_2,7018,YLSEKVLAA False True YLSEKVLAA 36.172796 497.284533679485 1411799.375 7015.0 ENSG00000184432|ENST00000333188|COPB2;;nc|ENSG00000184432|P35606-2|COPB2 2.560377756754557 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7019 36.176 147.0 378960.0 25 0 32017.0 -1 RMIDIQTRM 9 87 399.2016112960157 1194.583004488247 3 399.2014037966728 MULTI CID FTMS 0 0 0 7015 216818.515625 0.3688479249982536 -4 0.0920562744140625 4 2 Oxidation (M) _RM(Oxidation (M))IDIQTRM(Oxidation (M))_ ENSG00000071462|ENST00000265758|BUD23;ENST00000463307.5_1_7:73097949-73107126:+|nuORF;nc|ENSG00000071462|O43709-2|BUD23;nc|ENSG00000071462|O43709-3|BUD23 10.898955630103616 0.5416613042237204 6 [R{M(Oxidation (M))|F}]{I|L}D{I|L} 5 -1 21.695 0.0 0.0 1.8161 0.0 0.0 0.0 547.2276327443595 547.2276327443595 8.546349804879156 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [R{M(Oxidation (M))|F}]{I|L}D{I|L} 1.8161 + + 45 1 1.541 48110.6 1.0 1771 5246 7015 SUDHL4_400M_050219_2,7019 SUDHL4_400M_050219_2,7019,RMIDIQTRM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7021 36.181 112.0 351560.0 25 0 29007.0 + 3082 KQQAVSEEI 9 64 515.7697297341653 1029.5249065351304 2 516.2719604372978 MULTI CID FTMS 0 0 0 7020 373822.09375 0.670889783859239 5 -0.1852188110351562 1 Unmodified _AVMSLSFYL_ ENSG00000115616|ENST00000233969|SLC9A2 12.531546534597751 0.4974689918368763 6 {[VA]|[{I|L}G]}{[RE]|[WV]}VSEE 8 6 29.887 0.0 0.0 2.903 0.0 0.0 0.0 127.0680738516568 127.0680738516568 14.402369671232051 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.4247425010840047 0.0 {[VA]|[{I|L}G]}{[RE]|[WV]}VSEE 2.903 - 108 1 1.541 36798.8 1.0 1772 5247 7020 SUDHL4_400M_050219_2,7021 SUDHL4_400M_050219_2,7021,AVMSLSFYL False False KQQAVSEEI 36.180625 516.271960437298 3174758.0 7020.0 ENSG00000115616|ENST00000233969|SLC9A2 -0.3985153386990229 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7022 36.183 114.0 733930.0 25 0 117320.0 + 7944 ELRRVVKLL 9 81 375.91969707532166 1124.737261826165 3 375.9201232790947 MULTI CID FTMS 0 0 0 7020 471028.90625 0.2697909363111231 -3 0.06866455078125 2 Unmodified _ELRRVVKLL_ REV__ENSG00000196090|ENST00000373187|PTPRT;REV__nc|ENSG00000196090|O14522-1|PTPRT 13.614867670302877 0.4681447649821485 6 V{I|L}{I|L} 3 -1 27.479 0.0 0.0 2.4432 0.0 0.0 781.491206931228 0.0 781.491206931228 0.0 17.144804705553952 0.0 0.0 0 0.7302046884880937 0.0 0.0 0.0 V{I|L}{I|L} 2.4432 - 14 1 1.541 73314.9 1.0 1773 5247 7020 SUDHL4_400M_050219_2,7022 SUDHL4_400M_050219_2,7022,ELRRVVKLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7023 36.186 164.0 638460.0 25 0 93235.0 + 29853 QQQFHIFFT 9 82 598.2989805945938 1194.5834082559877 2 598.2999145388603 MULTI CID FTMS 0 0 0 7020 407240.09375 0.5985480080984156 -3 0.06866455078125 3 Unmodified _QQQFHIFFT_ REV__ENSG00000013288|ENST00000285599|MAN2B2;REV__ENST00000505907.1_1_4:6622802-6623009:+|nuORF 4.3292370932331545 0.7635526921153418 6 {I|L}{I|L}{I|L}{I|L}Q[C(Carbamidomethyl (C))S]R{M(Oxidation (M))|F} 9 -1 23.433 0.0 0.0 1.9616 0.0 0.0 0.0 60.97495727640481 60.97495727640481 11.650532923582432 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L}{I|L}Q[C(Carbamidomethyl (C))S]R{M(Oxidation (M))|F} 1.9616 - 200 1 1.541 79038.0 1.0 1774 5247 7020 SUDHL4_400M_050219_2,7023 SUDHL4_400M_050219_2,7023,QQQFHIFFT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7024 36.2 800.0 172570.0 25 0 14229.0 + 31262 RLVPSVNGV 9 148 470.7823769430526 939.5502009529052 2 470.7824890017509 MULTI CID FTMS 0 0 0 7020 91342.453125 0.2885198180295564 -3 0.06866455078125 4 Unmodified _RLVPSVNGV_ ENSG00000100714|ENST00000652337|MTHFD1;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 49.55428908609986 0.0413471690215031 6 [PS]V[R{I|L}]VNGV 9 4 + 47.709 0.0 0.0 5.0779 5.0779 79.957 0.0 0.0 0.0 3.8746434764138513 4.366371407252117 3.8746434764138513 3.8746434764138513 0 0.8252574989159953 1.0969100130080565 0.905855760735872 0.0 [PS]V[R{I|L}]VNGV;[R{I|L}]V[PS]VNGV;[VG]DVVA[KP]R;[VS]P[R{I|L}]VNGV;[VS]{I|L}[RP]VNGV;[PS]SVVA[KP]R;[PS]V[R{I|L}]VGGGV;[R{I|L}]V[PS]VGGGV;[VS]P[R{I|L}]VGGGV;[VS]{I|L}[RP]VGGGV 5.0779;4.6655;4.6132;4.5397;4.4414;4.1771;4.0978;3.6854;3.5597;3.4613 -;+;-;-;-;-;-;-;-;- + 843 1 1.541 107768.3 0.4399999976158142 1775 5247 7020 SUDHL4_400M_050219_2,7024 SUDHL4_400M_050219_2,7024,RLVPSVNGV True True RLVPSVNGV 36.200046 470.782489001751 1783219.875 7020.0 ENSG00000100714|ENST00000652337|MTHFD1;;ENST00000555252.5_1_14:64855058-64907131:+|nuORF 6.684786319732666 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7025 36.206 348.0 105010.0 25 0 10021.0 + 35962 SVPQKGLAY 9 67 481.7684324383572 961.5223119435144 2 481.7680847048759 MULTI CID FTMS 0 0 0 7020 88425.265625 1.0 0 0.0 5 Unmodified _SVPQKGLAY_ REV__ENSG00000073598|ENST00000158009|FNDC8 14.838274106304384 0.4350285940865338 6 AY 2 -1 24.464 0.0 0.0 2.5443 0.0 0.0 709.4113785712473 0.0 709.4113785712473 0.0 10.651668842475033 0.0 0.0 0 0.5 0.0 0.0 0.0 AY 2.5443 + + 23 + 1 1.541 33998.2 1.0 1776 5247 7020 SUDHL4_400M_050219_2,7025 SUDHL4_400M_050219_2,7025,SVPQKGLAY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7028 36.227 800.0 52220.0 25 0 13387.0 -1 0 34 1147.4403190037306 3439.299127611392 3 1147.773730456829 MULTI CID FTMS 0 0 0 7027 94922.9765625 0.9872280177747732 -1 0.0040664672851562 1 6 AT 2 -1 9.9485 0.0 0.0 0.28926 0.0 0.0 2734.9841384529923 529.2080554949678 3264.19219394796 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 AT 0.28926 - 8 + 1 1.541 46618.5 0.3600000143051147 1777 5249 7027 SUDHL4_400M_050219_2,7028 SUDHL4_400M_050219_2,7028, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7029 36.241 800.0 120010.0 25 0 11019.0 + -1 VLLCPCRAL 9 124 522.7878851924099 0 522.7877685427666 PEAK CID FTMS 0 0 0 7027 93460.484375 1.0 0 0.0 2 Carbamidomethyl (C) _VLLC(Carbamidomethyl (C))PCRAL_ REV__ENST00000434284.1_1_X:153001256-153003714:-|nuORF 30.22481116460888 0.1097735003385577 6 AVQEDWV 7 -1 38.933 0.0 0.0 3.7307 0.0 0.0 131.095700363709 82.06685815982655 213.16255852353555 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 AVQEDWV 3.7307 - 393 + 1 1.541 81970.9 0.4799999892711639 1778 5249 7027 SUDHL4_400M_050219_2,7029 SUDHL4_400M_050219_2,7029,VLLCPCRAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7030 36.254 800.0 250980.0 25 0 37064.0 -1 0 61 990.9096180268348 4949.511707801174 5 991.3114501833916 MULTI CID FTMS 0 0 0 7027 77648.03125 0.5088704379083683 -2 0.0346870422363281 3 6 E 1 -1 6.9897 0.0 0.0 0.14122 0.0 0.0 2230.1598187565755 2587.2819443355606 4817.441763092136 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.14122 - 3 + 1 1.541 134202.6 0.3899999856948852 1779 5249 7027 SUDHL4_400M_050219_2,7030 SUDHL4_400M_050219_2,7030, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7032 36.265 375.0 201030.0 25 0 18675.0 + 36224 SVYPNGHFV 9 111 510.25075454500046 1018.4869561568008 2 510.2507507205009 MULTI CID FTMS 0 0 0 7031 116692.2265625 0.6854943413669441 4 -0.2299346923828125 1 Unmodified _SVYPNGHFV_ ENSG00000166938|ENST00000319212|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-3|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L 28.486842064014134 0.1687311288560894 6 [VS]YPNGH{M(Oxidation (M))|F}V 9 0 + 41.485 0.0 0.0 4.0732 4.0732 81.98 0.0 0.0 0.0 23.604699792700576 3.9356186600228753 3.9356186600228753 9.208187539523747 0 0.6747425010840047 1.6989700043360187 0.0 0.0 + + [VS]YPNGH{M(Oxidation (M))|F}V;[VS]YPGGGH{M(Oxidation (M))|F}V;[VS]Y{M(Oxidation (M))|F}[YV]{[QN]|[E{I|L}]|[KN]};[{I|L}V][MD]NPY[PA];[VS]YP{[SA]|[TG]}{NN|[MP]|[D{I|L}]|[EV]}[PA];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TP]NPY[PA];[{I|L}V][MD]GGPY[PA];{[HG]|PP}N[{I|L}T]{M(Oxidation (M))|F}Y[PA];{[HG]|PP}N[YV]VY[PA];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[TP]GGPY[PA] 4.0732;3.1691;2.9089;2.4226;2.0708;1.7277;1.5185;1.3306;0.91357;0.82359 +;-;-;-;-;-;-;-;-;- + 255 + 1 1.541 61093.9 1.0 1780 5250 7031 SUDHL4_400M_050219_2,7032 SUDHL4_400M_050219_2,7032,SVYPNGHFV False True SVYPNGHFV 36.265085 510.250750720501 1534965.875 7031.0 ENST00000564909.5_1_15:66585934-66618751:+|nuORF;;nc|ENSG00000166938|Q8TF46-2|DIS3L;;nc|ENSG00000166938|Q8TF46-3|DIS3L;;nc|ENSG00000166938|Q8TF46-4|DIS3L;;ENSG00000166938|ENST00000319212|DIS3L 7.480515638987224 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7033 36.271 353.0 424090.0 25 0 136340.0 23838 LVGRVTRVLI 10 92 563.3768074584334 1124.7390619836667 2 563.3766967654228 MULTI CID FTMS 0 0 0 7031 241759.375 0.9609363947129184 -1 0.0440826416015625 2 Unmodified _LVGRVTRVLI_ ENSG00000146809|ENST00000451215|ASB15 13.614867670302877 0.6190977555336379 6 {M(Oxidation (M))|F} 1 10 10.485 0.0 0.0 0.93218 0.0 0.0 959.66018732722 0.0 959.66018732722 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.93218 - 22 + 1 1.541 117602.0 1.0 1781 5250 7031 SUDHL4_400M_050219_2,7033 SUDHL4_400M_050219_2,7033,LVGRVTRVLI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7034 36.28 467.0 215510.0 25 0 26376.0 + 34830 SQFPQPQHF 9 101 558.2674732276702 1114.5203935221402 2 558.2671996951103 MULTI CID FTMS 0 0 0 7031 157237.59375 0.7124966652185266 1 -0.0718154907226562 3 Unmodified _SQFPQPQHF_ ENSG00000143157|ENST00000367876|POGK 56.17704186161178 0.0281986971544335 6 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]PQ{M(Oxidation (M))|F}H 9 2 + 48.121 0.0 0.0 4.3177 4.3177 72.898 0.0 0.0 0.0 5.8825070861603805 0.6069784035361181 0.6069784035361181 0.6069784035361181 0 1.274227503252014 1.0 0.0 0.3494850021680094 {[QS]|[NT]}{M(Oxidation (M))|F}[QP]PQ{M(Oxidation (M))|F}H;{[QS]|[NT]}{M(Oxidation (M))|F}[QP]PQH{M(Oxidation (M))|F};{[QS]|[NT]}{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}P{M(Oxidation (M))|F}{[QS]|[NT]};{[QS]|[NT]}{M(Oxidation (M))|F}[QP]P[AG]{M(Oxidation (M))|F}H;{[QS]|[NT]}{M(Oxidation (M))|F}[QP]P[AG]H{M(Oxidation (M))|F};{[QS]|[NT]}{M(Oxidation (M))|F}[QP]{M(Oxidation (M))|F}[QP]H;[QP]{M(Oxidation (M))|F}HQP{M(Oxidation (M))|F}{[QS]|[NT]};[QP][QP]H{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QS]|[NT]};[QP]{M(Oxidation (M))|F}H[AG]P{M(Oxidation (M))|F}{[QS]|[NT]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}WP[QP]E{[QS]|[NT]} 4.3177;4.2632;4.1176;3.1779;3.1234;2.9729;2.7852;2.2606;1.959;1.8301 -;+;-;-;-;-;-;-;-;- + 496 + 1 1.541 81899.0 1.0 1782 5250 7031 SUDHL4_400M_050219_2,7034 SUDHL4_400M_050219_2,7034,SQFPQPQHF True True SQFPQPQHF 36.279749 558.26719969511 1640112.5 7031.0 ENSG00000143157|ENST00000367876|POGK 8.0959259668986 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7035 36.289 504.0 242100.0 25 0 34956.0 + 8019 TLMQDQQTL 9 118 547.2661989168807 1092.5178449005614 2 547.2645751833916 MULTI CID FTMS 0 0 0 7031 128716.3203125 0.7726083414201762 2 -0.1064491271972656 4 Unmodified _EMVTSLCPTI_ ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-5|PCM1 14.838274106304384 0.5985701837916485 6 [YT]YG{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VTR 9 8 + 37.118 0.0 0.0 3.3975 3.3975 76.801 0.0 0.0 0.0 5.5661410645871 0.1233373507372519 0.1233373507372519 6.47817481888638 0 0.3807196863200844 2.0 0.0 0.0 [YT]YG{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VTR;[YT]Y[YQ]VTR;[{I|L}T]Q{M(Oxidation (M))|F}DQWR;[YT]YG{[TV]|[{I|L}S]}{[HG]|PP}[VP];[YT][HK][TA]{M(Oxidation (M))|F}[EP];[YT][WP]GQWR;[YT][QP]GWWR;[YT][QP]D{I|L}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}T]Q{M(Oxidation (M))|F}GWWR;[YT]Y{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[HG]|PP}[VP] 3.3975;2.8045;2.54;2.3777;2.3232;2.2569;2.1187;1.9772;1.9002;1.7798 -;-;-;-;-;-;-;-;-;- 551 + 1 1.541 96707.1 1.0 1783 5250 7031 SUDHL4_400M_050219_2,7035 SUDHL4_400M_050219_2,7035,EMVTSLCPTI False False TLMQDQQTL 36.288647 547.264575183392 735760.5625 7031.0 ENSG00000078674|ENST00000325083|PCM1;;nc|ENSG00000078674|Q15154-4|PCM1;;nc|ENSG00000078674|Q15154-2|PCM1;;nc|ENSG00000078674|Q15154-5|PCM1 2.6240100661913552 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7036 36.302 800.0 90356.0 25 0 7181.7 -1 0 80 909.413427554 1816.8123021748 2 909.4149047732352 MULTI CID FTMS 0 0 0 7031 115990.5078125 0.7620760284376994 3 -0.1627655029296875 5 6 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 49.275 0.0 0.0 2.7122 0.0 0.0 803.3925648419937 0.0 803.3925648419937 0.0 25.0667531214534 0.0 0.0 0 1.424742501084005 0.0 0.0 1.1549471895720984 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.7122 - 284 1 1.541 54510.6 0.4799999892711639 1784 5250 7031 SUDHL4_400M_050219_2,7036 SUDHL4_400M_050219_2,7036, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7037 36.316 800.0 122440.0 25 0 10852.0 + -1 QCGPWSRNYFY 11 102 739.320000887006 1476.625448840812 2 739.3193237185478 MULTI CID FTMS 0 0 0 7031 78219.21875 0.8530882170750564 -2 0.0481491088867187 6 Carbamidomethyl (C) _QC(Carbamidomethyl (C))GPWSRNYFY_ REV__ENSG00000135862|ENST00000258341|LAMC1 5.731851221503515 0.8481046878870278 6 {[QG]|[NA]}GAG{[YC]|[HE]}AQQNA{M(Oxidation (M))|F}Y 14 -1 + 86.112 0.0 0.0 5.8317 5.8317 82.293 0.0 0.0 0.0 3.610264916694021 4.862618701688291 3.610264916694021 3.610264916694021 0 0.8935078169319297 0.8860566476931632 0.7302046884880937 2.166386562212267 {[QG]|[NA]}GAG{[YC]|[HE]}AQQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AG{[YC]|[HE]}AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAGA{[YC]|[HE]}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GQ{[YC]|[HE]}AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAQ{[YC]|[HE]}QQNA{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}AGA{[YC]|[HE]}QQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}AGG{[YC]|[HE]}AQQNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{[YC]|[HE]}A[AG]QNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{[YC]|[HE]}AQ[AG]NA{M(Oxidation (M))|F}Y;{[QG]|[NA]}GAG{[YC]|[HE]}AQQGGA{M(Oxidation (M))|F}Y 5.8317;5.5872;5.4779;5.3771;5.3167;5.2335;5.229;5.2188;5.2188;5.2188 -;-;-;-;-;-;-;-;-;- 7356 1 1.541 73173.9 0.4399999976158142 1785 5250 7031 SUDHL4_400M_050219_2,7037 SUDHL4_400M_050219_2,7037,QCGPWSRNYFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7038 36.326 568.0 181210.0 25 0 36903.0 -1 TIQMLFYME 9 109 604.2728770396388 1206.5312011460776 2 604.2745849490166 MULTI CID FTMS 0 0 0 7031 115815.296875 0.953262643301836 -2 0.0481491088867187 7 2 Oxidation (M) _TIQM(Oxidation (M))LFYM(Oxidation (M))E_ ENSG00000187535|ENST00000426508|IFT140;ENST00000439987.6_1_16:1604037-1657279:-|nuORF 10.073929032068715 0.563993802247229 6 [{I|L}T]Q{M(Oxidation (M))|F} 4 -1 17.484 0.0 0.0 1.4491 0.0 0.0 0.0 714.2840752517994 714.2840752517994 2.0386541109824936 0.0 0.0 0.0 0 0.0 0.619788758288394 0.3807196863200844 0.4247425010840047 [{I|L}T]Q{M(Oxidation (M))|F} 1.4491 + + 130 1 1.541 81655.3 1.0 1786 5250 7031 SUDHL4_400M_050219_2,7038 SUDHL4_400M_050219_2,7038,TIQMLFYME False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7040 36.331 42.0 1324400.0 25 0 252840.0 18640 LAGLSALPVS 10 67 464.2791342711911 926.5437156091822 2 464.2791015505791 MULTI CID FTMS 0 0 0 7039 1330539.0 0.5092348009779853 5 -0.2033920288085937 1 Unmodified _LAGLSALPVS_ ENSG00000061455|ENST00000407847|PRDM6 24.020572477871973 0.4289996903560794 6 [{I|L}A]V{[QD]|[EN]|[WG]|[KD]|[RS]}VPSV 9 6 + 46.017 0.0 0.0 4.9666 4.9666 89.328 0.0 0.0 0.0 10.942769533344752 7.523031669330038 7.523031669330038 46.01747349256659 0 0.8494850021680094 2.0 0.0 0.0 [{I|L}A]V{[QD]|[EN]|[WG]|[KD]|[RS]}VPSV 4.9666 - 106 + 1 1.541 46933.1 1.0 1787 5251 7039 SUDHL4_400M_050219_2,7040 SUDHL4_400M_050219_2,7040,LAGLSALPVS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7041 36.336 273.0 179780.0 25 0 10415.0 + 30814 RIIDTVAQV 9 73 507.8005295229851 1013.5865061127702 2 507.8007995486259 MULTI CID FTMS 0 0 0 7039 163872.46875 0.209003994493114 5 -0.2033920288085937 2 Unmodified _RIIDTVAQV_ ENSG00000102699|ENST00000381989|PARP4 24.99096001346401 0.2132109383330889 6 AVVTVAQV 8 4 47.186 0.0 0.0 4.6553 0.0 0.0 228.11163527656407 0.0 228.11163527656407 0.0 29.76280941356464 0.0 0.0 0 0.6747425010840047 0.0 0.3807196863200844 0.0 AVVTVAQV 4.6553 - 135 1 1.541 45690.4 1.0 1788 5251 7039 SUDHL4_400M_050219_2,7041 SUDHL4_400M_050219_2,7041,RIIDTVAQV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7042 36.341 219.0 414940.0 25 0 23600.0 + -1 VMPIQPTI 8 113 457.75622749960337 913.4979020660068 2 457.7560607790947 MULTI CID FTMS 0 0 0 7039 417091.8125 0.1985002313541577 -4 0.1505851745605468 3 Oxidation (M) _VM(Oxidation (M))PIQPTI_ REV__ENSG00000121406|ENST00000376233|ZNF549 28.486842064014134 0.4448922141344407 6 RNVGNT{I|L} 7 -1 51.49 0.0 0.0 5.6366 0.0 0.0 141.07934767890782 0.0 141.07934767890782 0.0 15.046568353847306 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 RNVGNT{I|L} 5.6366 - 1137 1 1.541 72713.1 1.0 1789 5251 7039 SUDHL4_400M_050219_2,7042 SUDHL4_400M_050219_2,7042,VMPIQPTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7043 36.347 336.0 232320.0 25 0 35168.0 + 17936 KQYADVEGF 9 100 528.7534279011402 1055.4923028690805 2 528.7535888552666 MULTI CID FTMS 0 0 0 7039 196066.390625 0.5088531307390828 -2 0.1158981323242187 4 Unmodified _KQYADVEGF_ ENSG00000165119|ENST00000376263|HNRNPK;nc|ENSG00000165119|P61978-3|HNRNPK 62.57269311338072 0.0246576765497938 6 [KQ]YADVEG{M(Oxidation (M))|F} 9 0 + 67.63 0.0 0.0 6.4074 6.4074 79.126 0.0 0.0 0.0 0.0860017176191831 12.388914047391673 0.0860017176191831 0.0860017176191831 0 0.5 0.0 0.75 1.1307196863200843 + + [KQ]YADVEG{M(Oxidation (M))|F};[AG]KYADVEG{M(Oxidation (M))|F};[YQ]KADVEG{M(Oxidation (M))|F};[AG]YKADVEG{M(Oxidation (M))|F};[YQ]AKDVEG{M(Oxidation (M))|F};[AG]YAKDVEG{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}SKADVEG{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}SAKDVEG{M(Oxidation (M))|F};{[DA]|[EG]}Y[KQ]VEG{M(Oxidation (M))|F};{[CT]|[{M(Oxidation (M))|F}G]}SKWVW{M(Oxidation (M))|F} 6.4074;6.3993;6.2902;6.282;6.1234;6.1152;5.9224;5.7556;4.7989;4.5013 +;-;-;-;-;-;-;-;-;- + 862 1 1.541 65710.0 1.0 1790 5251 7039 SUDHL4_400M_050219_2,7043 SUDHL4_400M_050219_2,7043,KQYADVEGF True True KQYADVEGF 36.346609 528.753588855267 1849454.375 7039.0 nc|ENSG00000165119|P61978-3|HNRNPK;;ENSG00000165119|ENST00000376263|HNRNPK 7.414900302886963 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7044 36.359 716.0 213650.0 25 0 14405.0 + 17253 KLNAKLAEL 9 168 500.3133747700542 998.6121966069084 2 500.3141662478447 MULTI CID FTMS 0 0 0 7039 115371.984375 0.7511692819075478 -1 0.0718154907226562 5 Unmodified _KLNAKLAEL_ ENSG00000168906|ENST00000306434|MAT2A;ENST00000490878.1_1_2:85768733-85769182:+|nuORF;nc|ENSG00000168906|P31153-2|MAT2A 67.83816525789305 0.0219346420158844 6 {I|L}K{M(Oxidation (M))|F}A{I|L}KNT 8 7 63.098 0.0 0.0 6.3186 0.0 0.0 0.0 80.05114923648671 80.05114923648671 43.27750082630029 0.0 0.0 0.0 0 0.6382104921644451 0.619788758288394 1.2376954943324543 0.3807196863200844 {I|L}K{M(Oxidation (M))|F}A{I|L}KNT 6.3186 - 8158 + 1 1.541 118280.2 1.0 1791 5251 7039 SUDHL4_400M_050219_2,7044 SUDHL4_400M_050219_2,7044,KLNAKLAEL True True KLNAKLAEL 36.359032 500.314166247845 833153.9375 7039.0 nc|ENSG00000168906|P31153-2|MAT2A;;ENST00000490878.1_1_2:85768733-85769182:+|nuORF;;ENSG00000168906|ENST00000306434|MAT2A 4.175068537394206 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7045 36.361 86.0 597270.0 25 0 82852.0 -1 0 81 487.2750156864829 486.2677392198829 1 487.2746459841728 MULTI CID FTMS 0 0 0 7039 817357.5 0.5618549463798976 2 -0.0909500122070312 6 6 A 1 -1 11.594 0.0 0.0 2.3842 0.0 0.0 397.21948895308446 0.0 397.21948895308446 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 A 2.3842 - 14 + 1 1.541 44354.0 1.0 1792 5251 7039 SUDHL4_400M_050219_2,7045 SUDHL4_400M_050219_2,7045, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7047 36.368 268.0 267810.0 25 0 25947.0 + 20161 LKPGILPVPK 10 99 531.3577347660307 1060.700916598861 2 531.3576537966728 MULTI CID FTMS 0 0 0 7046 194680.5625 0.0671734956331574 31 -1.0858917236328125 1 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 14.218169984304629 0.6089749286722269 6 K{I|L}AP{I|L}VPPVK 10 -1 + 66.655 0.0 0.0 6.284 6.284 90.713 0.0 0.0 0.0 46.1700442715712 2.0609971201947985 2.0609971201947985 11.057743964882718 0 2.25 0.0 0.0 0.1861818737241735 K{I|L}AP{I|L}VPPVK;K{I|L}AP{I|L}VKP[VP];K{I|L}AP{I|L}VPK[VP] 6.284;5.2415;5.1237 -;-;- 285 + 1 1.541 59599.2 1.0 1793 5252 7046 SUDHL4_400M_050219_2,7047 SUDHL4_400M_050219_2,7047,LKPGILPVPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7048 36.38 683.0 166180.0 25 0 66428.0 37601 TLKNSKCL 8 114 453.7569524790706 905.4993520249412 2 454.2619811892509 MULTI CID FTMS 0 0 0 7046 101236.53125 0.7181558319517893 5 -0.1963310241699218 2 Unmodified _TLKNSKCL_ ENSG00000163444|ENST00000367242|TMEM183A;nc|ENSG00000224831|Q1AE95|TMEM183BP 13.50788311687929 0.7113601687236069 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E 3 7 25.304 0.0 0.0 2.7945 0.0 0.0 0.0 539.3321627252561 539.3321627252561 9.106056125004828 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E 2.7945 - 47 + 1 1.541 95244.9 1.0 1794 5252 7046 SUDHL4_400M_050219_2,7048 SUDHL4_400M_050219_2,7048,TLKNSKCL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7049 36.39 558.0 232630.0 25 0 11085.0 + 31130 RLMNDMTAV 9 141 541.7516962118151 1081.48883949043 2 541.7513305544853 MULTI CID FTMS 0 0 0 7046 181169.34375 0.0761818623057365 -4 0.1545982360839843 3 2 Oxidation (M) _RLM(Oxidation (M))NDM(Oxidation (M))TAV_ ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1 62.57269311338072 0.0246576765497938 6 [R{I|L}]{M(Oxidation (M))|F}ND{M(Oxidation (M))|F}TAV 9 0 + 73.497 0.0 0.0 6.7959 6.7959 90.46 0.0 0.0 0.0 4.762036441594191 48.39780305324595 4.762036441594191 9.208187539523747 0 0.8494850021680094 0.0 1.2059771852360797 0.6109243748081782 + + [R{I|L}]{M(Oxidation (M))|F}ND{M(Oxidation (M))|F}TAV;[R{I|L}]{M(Oxidation (M))|F}GGD{M(Oxidation (M))|F}TAV;{[QN]|[E{I|L}]|[KN]}[C(Carbamidomethyl (C))K]D{M(Oxidation (M))|F}TAV;YA{[DS]|[MA]|[CV]|TT}DN{NN|[MP]|[D{I|L}]|[EV]}AV;[{I|L}T][C(Carbamidomethyl (C))R]D{M(Oxidation (M))|F}TAV;[DN]{M(Oxidation (M))|F}[R{I|L}]{M(Oxidation (M))|F}TAV;{[CP]|[EA]}NH{[HG]|PP}{M(Oxidation (M))|F}TAV;YA[WM]N{NN|[MP]|[D{I|L}]|[EV]}AV;YA{[DS]|[MA]|[CV]|TT}DN{NN|[MP]|[D{I|L}]|[EV]}VA;[R{I|L}]{M(Oxidation (M))|F}ND{M(Oxidation (M))|F}G[{I|L}T] 6.7959;5.9444;5.7737;4.6824;4.6439;4.1374;3.5612;3.4952;3.4303;3.415 +;-;-;-;-;-;-;-;-;- + 1116 1 1.541 101517.9 1.0 1795 5252 7046 SUDHL4_400M_050219_2,7049 SUDHL4_400M_050219_2,7049,RLMNDMTAV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7050 36.403 767.0 134040.0 25 0 15723.0 + 14101 IARLPSSTL 9 140 479.2896117245696 956.5646705159392 2 479.2907897830009 MULTI CID FTMS 0 0 0 7046 81276.734375 0.7913372509391187 -1 0.0346336364746093 4 Unmodified _IARLPSSTL_ ENSG00000186185|ENST00000593135|KIF18B;nc|ENSG00000186185|Q86Y91-6|KIF18B 78.7280429016045 0.0178249292250809 6 [{I|L}A]R{I|L}RDT{I|L} 8 3 + 55.058 0.0 0.0 5.7558 5.7558 82.414 0.0 0.0 0.0 4.45706311143568 14.024174299985006 4.45706311143568 4.006375246153908 0 1.079689690656103 1.3010299956639813 0.7742275032520141 0.2396518287104437 [{I|L}A]R{I|L}RDT{I|L};[{I|L}A]R{I|L}[PS]ST{I|L};[{I|L}V][Q{I|L}]RDT{I|L};[{I|L}V][Q{I|L}][PS]ST{I|L};[{I|L}A]R{I|L}[VG]DT{I|L};[{I|L}A]R[PS]{I|L}ST{I|L};[{I|L}A]R{I|L}RSE{I|L};[{I|L}V][Q{I|L}][VG]DT{I|L};[{I|L}V][Q{I|L}]RSE{I|L};[{I|L}A]R{I|L}WW{I|L} 5.7558;5.337;5.2898;4.871;4.7875;4.637;4.5304;4.3216;4.0644;3.9151 -;+;-;-;-;-;-;-;-;- + 398 1 1.541 82663.2 1.0 1796 5252 7046 SUDHL4_400M_050219_2,7050 SUDHL4_400M_050219_2,7050,IARLPSSTL True True IARLPSSTL 36.403397 479.290789783001 617608.75 7046.0 ENSG00000186185|ENST00000593135|KIF18B;;nc|ENSG00000186185|Q86Y91-6|KIF18B 1.5783214370409648 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7051 36.417 800.0 78397.0 25 0 24252.0 -1 0 40 1094.1215690137865 3279.3428776415594 3 1094.455371081829 MULTI CID FTMS 0 0 0 7046 117948.53125 0.7348124252285366 -1 0.0346336364746093 5 6 E 1 -1 6.9897 0.0 0.0 0.21314 0.0 0.0 2623.114863580816 524.1611422174436 3147.27600579826 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.21314 - 10 + 1 1.541 69172.8 0.4300000071525574 1797 5252 7046 SUDHL4_400M_050219_2,7051 SUDHL4_400M_050219_2,7051, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7053 36.426 267.0 200950.0 25 0 23065.0 + 13038 HAVFPTSSM 9 85 496.7287494618379 991.4429459904758 2 496.7289916872978 MULTI CID FTMS 0 0 0 7052 189651.515625 0.5494538460828097 3 -0.1124420166015625 1 Oxidation (M) _HAVFPTSSM(Oxidation (M))_ ENSG00000075340|ENST00000264436|ADD2;nc|ENSG00000075340|P35612-2|ADD2;nc|ENSG00000075340|P35612-3|ADD2;nc|ENSG00000075340|P35612-4|ADD2;nc|ENSG00000075340|P35612-5|ADD2;nc|ENSG00000075340|P35612-6|ADD2;nc|ENSG00000075340|P35612-8|ADD2;nc|ENSG00000075340|P35612-9|ADD2 63.562846038646086 0.0241094678104353 6 [HA][C(Carbamidomethyl (C))K]RSS{M(Oxidation (M))|F} 8 4 [HA][C(Carbamidomethyl (C))K]R + + 33.672 10.202 1.5639 3.3963 3.3963 52.391 0.0 0.0 0.0 0.0 1.4485657490360635 0.0 0.0 0 0.4247425010840047 0.0 0.6237125054200234 0.0 [HA][C(Carbamidomethyl (C))K]RSS{M(Oxidation (M))|F} 3.3963 - 57 + 1 1.541 46537.3 1.0 1798 5253 7052 SUDHL4_400M_050219_2,7053 SUDHL4_400M_050219_2,7053,HAVFPTSSM True False HAVFPTSSM 36.426071 496.728991687298 7147521.0 7052.0 nc|ENSG00000075340|P35612-6|ADD2;;nc|ENSG00000075340|P35612-3|ADD2;;nc|ENSG00000075340|P35612-2|ADD2;;nc|ENSG00000075340|P35612-4|ADD2;;nc|ENSG00000075340|P35612-9|ADD2;;nc|ENSG00000075340|P35612-5|ADD2;;nc|ENSG00000075340|P35612-8|ADD2;;ENSG00000075340|ENST00000264436|ADD2 8.310261885325113 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7054 36.44 800.0 221660.0 25 0 29723.0 18966 LDENWYQGEIN 11 112 690.8042189065449 1379.5938848798896 2 690.8052856326103 MULTI CID FTMS 0 0 0 7052 161743.671875 0.9975059448457462 2 -0.0878639221191406 2 Unmodified _LDENWYQGEIN_ ENSG00000156463|ENST00000359120|SH3RF2 17.11289562659939 0.6791789249425932 6 {NN|[MP]|[D{I|L}]|[EV]}ENSKADW{I|L}K 11 6 79.394 0.0 0.0 5.7549 0.0 0.0 0.0 76.93269261807532 76.93269261807532 58.92505248316361 0.0 0.0 0.0 0 0.0 2.0 0.8441876774005248 1.3441876774005248 {NN|[MP]|[D{I|L}]|[EV]}ENSKADW{I|L}K 5.7549 - 7437 1 1.541 131214.3 0.5899999737739563 1799 5253 7052 SUDHL4_400M_050219_2,7054 SUDHL4_400M_050219_2,7054,LDENWYQGEIN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7055 36.442 110.0 534350.0 25 0 76824.0 + 9280 FIAPTGHSL 9 91 471.7557312613339 941.4969095894678 2 471.7557861208916 MULTI CID FTMS 0 0 0 7052 321978.21875 0.5049922824666229 -2 0.0909500122070312 3 Unmodified _FIAPTGHSL_ ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11 77.98433622928108 0.0180125044636492 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APTGHTV 9 2 + 50.073 0.0 0.0 5.3185 5.3185 76.367 0.0 0.0 0.0 7.147642715192504 0.7463361829690385 0.7463361829690385 0.7463361829690385 0 0.75 0.0 1.73239816956497 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APTGHTV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}APTGHS{I|L};[Q{I|L}]NGTPA{[QN]|[E{I|L}]|[KN]};[Q{I|L}]GGGTPA{[QN]|[E{I|L}]|[KN]};{[HG]|PP}[YR]PA{[QN]|[E{I|L}]|[KN]};[PA][HS]S{I|L}A{M(Oxidation (M))|F}{I|L};[PA]Q[QA]PA{M(Oxidation (M))|F}{I|L};{[HG]|PP}[TP]S{I|L}A{M(Oxidation (M))|F}{I|L};[PA]Q[QA][VS]{[QN]|[E{I|L}]|[KN]};{[HG]|PP}{[VA]|[{I|L}G]}[{M(Oxidation (M))|F}V]A{[QN]|[E{I|L}]|[KN]} 5.3185;5.2392;4.2233;3.2453;1.8718;1.4584;0.97593;0.97411;0.76743;0.75537 -;+;-;-;-;-;-;-;-;- + 214 + 1 1.541 49485.0 1.0 1800 5253 7052 SUDHL4_400M_050219_2,7055 SUDHL4_400M_050219_2,7055,FIAPTGHSL True True FIAPTGHSL 36.442219 471.7559 5617683.5 7052.0 nc|ENSG00000125354|Q14141-4|SEPTIN6;;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11;;nc|ENSG00000125354|Q14141|SEPTIN6;;ENSG00000125354|ENST00000394610|SEPTIN6;;nc|ENSG00000125354|Q14141-3|SEPTIN6;;ENSG00000138758|ENST00000264893|SEPTIN11 5.974701881408691 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7056 36.446 179.0 391880.0 25 0 66981.0 + 16260 IVSAQNLLK 9 92 493.3060592828161 984.5975656324322 2 493.3065673708916 MULTI CID FTMS 0 0 0 7052 277135.9375 0.5230082093950694 -1 0.0563163757324218 4 Unmodified _IVSAQNLLK_ L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;nc|ENSG999|O00370|L1_ORF2 38.17557092003332 0.0854718145212029 6 {I|L}VSAQN{I|L}{I|L}K 9 0 + 74.339 0.0 0.0 7.5502 7.5502 88.449 0.0 0.0 0.0 36.47817481888637 5.528419686577806 5.528419686577806 5.528419686577806 0 0.9247425010840048 2.0 0.0 0.0 + + {I|L}VSAQN{I|L}{I|L}K;{I|L}VSAQN{I|L}K{I|L};{I|L}VSAQGG{I|L}{I|L}K;{I|L}VSA[AG]N{I|L}{I|L}K;{I|L}VSA[AG]N{I|L}K{I|L};{I|L}VSAQGG{I|L}K{I|L};{I|L}VSA[AG]GG{I|L}{I|L}K;{I|L}VSA[AG]GG{I|L}K{I|L} 7.5502;6.9887;6.6149;6.6149;6.0534;6.0534;5.6841;5.1226 +;-;-;-;-;-;-;- + 280 + 1 1.541 60326.3 1.0 1801 5253 7052 SUDHL4_400M_050219_2,7056 SUDHL4_400M_050219_2,7056,IVSAQNLLK True True IVSAQNLLK 36.445688 493.306567370892 2384000.0 7052.0 nc|ENSG999|O00370|L1_ORF2;;L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|27|1|sense;;L1PA4_dup6539|chr9:62818106-62820097:-|1.2919512390479817|0.3652598472434726|1.82|48.0|7|2|sense 5.468573093414307 2.0 True 9.0 False ERV PXD020620_cell_line SUDHL4_400M_050219_2 7057 36.454 453.0 185000.0 25 0 15080.0 + -1 AMFNGGMATT 10 128 516.7099230290399 1031.4052931248798 2 516.7099487185478 MULTI CID FTMS 0 0 0 7052 165536.359375 0.7624147464336766 -1 0.0563163757324218 5 2 Oxidation (M) _AM(Oxidation (M))FNGGM(Oxidation (M))ATT_ ENSG00000133243|ENST00000255608|BTBD2;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1 39.957323273325 0.1580177220464651 6 [YK]{M(Oxidation (M))|F}{M(Oxidation (M))|F}NN{[CP]|[EA]} 8 -1 + 32.484 0.0 0.0 3.1495 3.1495 80.246 0.0 0.0 0.0 6.223637474483468 6.989700043360188 6.223637474483468 9.262137858390812 0 0.3054621874040891 0.0 0.0 0.8494850021680094 [YK]{M(Oxidation (M))|F}{M(Oxidation (M))|F}NN{[CP]|[EA]};[YK]{M(Oxidation (M))|F}{M(Oxidation (M))|F}GGN{[CP]|[EA]};[YK]{M(Oxidation (M))|F}{M(Oxidation (M))|F}NGG{[CP]|[EA]};[YK][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]TN{[CP]|[EA]};WW{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[CP]|[EA]};WW{M(Oxidation (M))|F}[YE]TT;[YK][C(Carbamidomethyl (C))N]T{M(Oxidation (M))|F}{[CP]|[EA]};[YK][C(Carbamidomethyl (C)){M(Oxidation (M))|F}]TGG{[CP]|[EA]};[YK]{M(Oxidation (M))|F}{M(Oxidation (M))|F}GGGG{[CP]|[EA]};WW{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}M 3.1495;2.2515;2.2515;2.0309;1.6439;1.512;1.0571;0.72112;0.53507;0.36192 -;-;-;-;-;-;-;-;-;- 1206 + 1 1.541 68264.9 1.0 1802 5253 7052 SUDHL4_400M_050219_2,7057 SUDHL4_400M_050219_2,7057,AMFNGGMATT False False AMFNGGMATT 36.453744 516.709948718548 1065015.625 7052.0 ENSG00000133243|ENST00000255608|BTBD2;;nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1 7.217546145121257 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7058 36.465 629.0 361120.0 25 0 29913.0 + 33149 SEVMGEPHL 9 177 507.7314946897257 1013.4484364462514 2 507.7315856814384 MULTI CID FTMS 0 0 0 7052 160889.484375 0.1721638722763405 -5 0.2109146118164062 6 Oxidation (M) _SEVM(Oxidation (M))GEPHL_ ENSG00000132963|ENST00000380842|POMP 77.98433622928108 0.0180125044636492 6 {[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}{[DA]|[EG]}PH{I|L} 9 0 + 48.655 0.0 0.0 4.801 4.801 86.606 0.0 0.0 0.0 17.600975404644895 10.088422267289126 10.088422267289126 13.745624635175645 0 1.2396518287104437 0.0 0.9559771852360796 0.0 + + {[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}{[DA]|[EG]}PH{I|L};{[ES]|[DT]|[{I|L}C]}V[YR]VD{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}R{[YD]|[{M(Oxidation (M))|F}M]}V;{[ES]|[DT]|[{I|L}C]}YT{I|L}S[WE];{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}[HV]E[PA];{[ES]|[DT]|[{I|L}C]}V{I|L}[HD][WE];{[ES]|[DT]|[{I|L}C]}V[HV]E[WE];{[ES]|[DT]|[{I|L}C]}YT{I|L}{[C(Carbamidomethyl (C))E]|[WC]}{I|L};{[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}[VG]{[YD]|[{M(Oxidation (M))|F}M]}V;{NN|[MP]|[D{I|L}]|[EV]}S[YR]VD{M(Oxidation (M))|F} 4.801;3.4447;3.3488;3.0819;3.0186;2.7105;2.5685;2.5012;2.4349;2.4246 +;-;-;-;-;-;-;-;-;- + 1631 + 1 1.541 172542.7 1.0 1803 5253 7052 SUDHL4_400M_050219_2,7058 SUDHL4_400M_050219_2,7058,SEVMGEPHL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7059 36.471 324.0 124640.0 25 0 16762.0 + 43015 VVYHGVQP 8 63 449.74394903731815 897.4733451414363 2 450.7498962283134 MULTI CID FTMS 0 0 0 7052 113233.0546875 1.0 0 0.0 7 Unmodified _VVYHGVQP_ REV__ENSG00000053747|ENST00000313654|LAMA3;REV__nc|ENSG00000053747|Q16787-3|LAMA3 10.183394434864962 0.7604730176254005 6 VV[HN]S 5 -1 18.072 0.0 0.0 2.0136 0.0 0.0 0.0 358.17949683504884 358.17949683504884 4.576666314464788 0.0 0.0 0.0 0 0.0 2.0 0.0 0.3054621874040891 VV[HN]S 2.0136 - 103 1 1.541 36387.1 1.0 1804 5253 7052 SUDHL4_400M_050219_2,7059 SUDHL4_400M_050219_2,7059,VVYHGVQP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7060 36.484 800.0 88015.0 25 0 12736.0 + -1 LVGGTCPACSF 11 104 556.2491324416535 0 556.2490722537041 PEAK CID FTMS 0 0 0 7052 84908.984375 1.0 0 0.0 8 Carbamidomethyl (C) _LVGGTC(Carbamidomethyl (C))PACSF_ REV__ENSG00000153531|ENST00000612156|ADPRHL1 10.073929032068715 0.4495801685015257 6 N 1 -1 10.485 0.0 0.0 0.94414 0.0 0.0 784.2886568737382 209.12948023013908 993.4181371038773 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 N 0.94414 - 23 + 1 1.541 59988.8 0.4799999892711639 1805 5253 7052 SUDHL4_400M_050219_2,7060 SUDHL4_400M_050219_2,7060,LVGGTCPACSF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7062 36.491 150.0 553590.0 25 0 139390.0 22844 LRTLAARVLI 10 84 375.91969707532166 1124.737261826165 3 375.9200927615166 MULTI CID FTMS 0 0 0 7061 267323.96875 0.1531149848140937 4 -0.0767364501953125 1 Unmodified _LRTLAARVLI_ ENST00000155926.8_1_2:12857892-12858144:+|nuORF 11.631370582801994 0.6523789101569337 6 V{I|L}{I|L} 3 7 24.425 0.0 0.0 2.1716 0.0 0.0 781.492615767547 0.0 781.492615767547 0.0 17.43501263708417 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + V{I|L}{I|L} 2.1716 + + 26 1 1.541 68385.3 1.0 1806 5254 7061 SUDHL4_400M_050219_2,7062 SUDHL4_400M_050219_2,7062,LRTLAARVLI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7063 36.505 800.0 93218.0 25 0 10006.0 + -1 VGSKCVQDRF 10 100 598.2989805945938 1194.5834082559877 2 598.3001586794853 MULTI CID FTMS 0 0 0 7061 56917.140625 0.0836549290470031 4 -0.0767364501953125 2 Carbamidomethyl (C) _VGSKC(Carbamidomethyl (C))VQDRF_ REV__ENSG00000090006|ENST00000396819|LTBP4;REV__ENST00000318809.11_1_19:41120174-41135452:+|nuORF;REV__ENST00000595118.5_1_19:41119631-41135452:+|nuORF;REV__ENST00000598178.1_1_19:41128811-41129744:+|nuORF;REV__nc|ENSG00000090006|Q8N2S1-3|LTBP4;REV__nc|ENSG00000090006|Q8N2S1-4|LTBP4;REV__nc|ENSG00000090006|Q8N2S1|LTBP4 5.296884461304476 0.7021353017287152 6 {I|L}{I|L}{I|L}{I|L} 4 -1 21.146 0.0 0.0 1.7702 0.0 0.0 0.0 739.2249237191312 739.2249237191312 14.69273760456403 0.0 0.0 0.0 0 0.0 0.7958800173440752 0.0 0.0 {I|L}{I|L}{I|L}{I|L} 1.7702 - 38 1 1.541 61417.7 0.5 1807 5254 7061 SUDHL4_400M_050219_2,7063 SUDHL4_400M_050219_2,7063,VGSKCVQDRF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7065 36.516 463.0 201710.0 25 0 25927.0 + 27234 PGNPKGKG 8 141 377.71548454488766 0 377.7153503298759 PEAK CID FTMS 0 0 0 7064 124345.3046875 0.9604844870358242 2 -0.0521507263183593 1 Unmodified _PGNPKGKG_ REV__ENST00000478753.4_3_16:30455798-30455846:-|nuORF 5.760428011301431 0.5786759180849727 6 {I|L}RVG 4 -1 8.3855 0.0 0.0 1.113 0.0 0.0 147.0677971892233 178.05105005435783 325.1188472435812 0.0 0.0 0.0 0.0 0 0.6435078169319297 0.0 0.0 0.4247425010840047 {I|L}RVG 1.113 - 34 + 1 1.541 77374.4 1.0 1808 5255 7064 SUDHL4_400M_050219_2,7065 SUDHL4_400M_050219_2,7065,PGNPKGKG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7066 36.53 800.0 198970.0 25 0 15960.0 + 36154 SVVDISQQY 9 143 519.7584613647075 1037.502369796215 2 519.7587158083916 MULTI CID FTMS 0 0 0 7064 166738.625 1.0 0 0.0 2 Unmodified _SVVDISQQY_ ENSG00000168303|ENST00000306984|MPLKIP 48.345845343767074 0.0439967357579942 6 [VS]VD{I|L}S 6 3 35.187 0.0 0.0 3.3916 0.0 0.0 0.0 434.1701303765462 434.1701303765462 16.91630954681238 0.0 0.0 0.0 0 0.0 2.0 0.9604093769761876 0.0 + [VS]VD{I|L}S 3.3916 + + 373 1 1.541 123800.0 0.6600000262260437 1809 5255 7064 SUDHL4_400M_050219_2,7066 SUDHL4_400M_050219_2,7066,SVVDISQQY True True SVVDISQQY 36.529698 519.758715808392 859162.0 7064.0 ENSG00000168303|ENST00000306984|MPLKIP 5.462049643198649 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7068 36.54 429.0 158530.0 25 0 12019.0 + 31245 RLTEEFQNV 9 102 568.2902216355627 1134.565890337925 2 568.2899658083916 MULTI CID FTMS 0 0 0 7067 130221.2265625 0.7058585911113648 -4 0.1687583923339843 1 Unmodified _RLTEEFQNV_ ENSG00000122687|ENST00000242257|MRM2;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;ENST00000486040.1_1_7:2274759-2277695:-|nuORF 34.93206674587334 0.1032771302489716 6 [KG][KG]EE{M(Oxidation (M))|F}QNV 10 4 + 53.382 0.0 0.0 4.7051 4.7051 82.992 0.0 0.0 0.0 1.7339374311232802 38.67697394072741 1.7339374311232802 9.164539485499262 0 0.7614393726401688 0.0 0.2887254899964357 0.3494850021680094 [KG][KG]EE{M(Oxidation (M))|F}QNV;[KG][KG]EE{M(Oxidation (M))|F}[AG]NV;[KG][KG]EE{M(Oxidation (M))|F}QGGV;{[NV]|[RG]}{[NV]|[RG]}{[DS]|[MA]|[CV]|TT}{M(Oxidation (M))|F}QNV;{[NV]|[RG]}{[NV]|[RG]}WYQNV;[KC]Q[RP][YQ]NV 4.7051;3.8973;3.8973;3.1035;2.4099;1.6789 -;-;-;-;-;- 216 1 1.541 56469.1 1.0 1810 5256 7067 SUDHL4_400M_050219_2,7068 SUDHL4_400M_050219_2,7068,RLTEEFQNV True True RLTEEFQNV 36.539894 568.2898 1090256.875 7067.0 ENST00000486040.1_1_7:2274759-2277695:-|nuORF;;ENST00000467199.5_1_7:2274759-2281791:-|nuORF;;ENSG00000122687|ENST00000242257|MRM2 5.279487291971843 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7069 36.544 218.0 186690.0 25 0 21564.0 + 32426 SAAQPGVAF 9 85 424.2190506450983 846.4235483569965 2 424.2188293337822 MULTI CID FTMS 0 0 0 7067 183505.375 0.7075964861247912 -5 0.2033920288085937 2 Unmodified _SAAQPGVAF_ ENSG00000108061|ENST00000369452|SHOC2;nc|ENSG00000108061|Q9UQ13-2|SHOC2 25.399314129420983 0.2080152500878129 6 {M(Oxidation (M))|F}QA{M(Oxidation (M))|F} 4 6 24.157 0.0 0.0 2.854 0.0 0.0 335.1847921087528 0.0 335.1847921087528 0.0 -0.8534811358448735 -0.8534811358448735 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}QA{M(Oxidation (M))|F} 2.854 - 152 + 1 1.541 37602.1 1.0 1811 5256 7067 SUDHL4_400M_050219_2,7069 SUDHL4_400M_050219_2,7069,SAAQPGVAF False True SAAQPGVAF 36.544006 424.218829333782 3855084.25 7067.0 ENSG00000108061|ENST00000369452|SHOC2;;nc|ENSG00000108061|Q9UQ13-2|SHOC2 6.118866920471191 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7070 36.551 402.0 176470.0 25 0 11463.0 + 31135 RLNDFASTV 9 107 511.7660256408653 1021.5174983485306 2 511.7635986208916 MULTI CID FTMS 0 0 0 7067 141075.25 0.1648493010422471 -8 0.3233566284179687 3 Unmodified _RLNDFASTV_ ENSG00000178741|ENST00000322347|COX5A 26.268140514670165 0.1969607489560049 6 {[TV]|[{I|L}S]}PSN{M(Oxidation (M))|F}AS{[TV]|[{I|L}S]} 10 4 + 35.046 0.0 0.0 3.4308 3.4308 76.186 0.0 0.0 0.0 9.73206823412064 5.764837301042718 5.764837301042718 5.427965835756439 0 0.3494850021680094 1.0457574905606752 1.0629529932484498 0.0 {[TV]|[{I|L}S]}PSN{M(Oxidation (M))|F}AS{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}PSNP[HA]{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}PSGG{M(Oxidation (M))|F}AS{[TV]|[{I|L}S]};[PS]{I|L}SN{M(Oxidation (M))|F}AS{[TV]|[{I|L}S]};{[QV]|[N{I|L}]|[RA]|[KV]}RD{M(Oxidation (M))|F}AS{[TV]|[{I|L}S]};[PS]{I|L}SNP[HA]{[TV]|[{I|L}S]};[YE]K[QP]AS{[TV]|[{I|L}S]};{[MG]|[TS]}[VP]N{M(Oxidation (M))|F}AS{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}PSGGP[HA]{[TV]|[{I|L}S]};[PS]{I|L}SGG{M(Oxidation (M))|F}AS{[TV]|[{I|L}S]} 3.4308;2.8995;2.5337;2.4781;2.307;1.9468;1.7451;1.6741;1.6602;1.581 -;-;-;-;-;-;-;-;-;- 704 1 1.541 59257.2 1.0 1812 5256 7067 SUDHL4_400M_050219_2,7070 SUDHL4_400M_050219_2,7070,RLNDFASTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7071 36.557 335.0 178530.0 25 0 25059.0 40054 VGGLYTSV 8 99 398.21640358713256 794.4182542410651 2 398.2169372439384 MULTI CID FTMS 0 0 0 7067 146246.921875 1.0 0 0.0 4 Unmodified _VGGLYTSV_ ENSG00000164414|ENST00000369552|SLC35A1;nc|ENSG00000164414|P78382-2|SLC35A1 2.577480529830294 0.808687252328423 6 {M(Oxidation (M))|F} 1 8 8.4949 0.0 0.0 1.0693 0.0 0.0 397.22841767055576 247.0977360903099 644.3261537608656 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0693 - 8 + 1 1.541 53496.1 1.0 1813 5256 7067 SUDHL4_400M_050219_2,7071 SUDHL4_400M_050219_2,7071,VGGLYTSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7075 36.572 152.0 412510.0 25 0 153650.0 -1 0 59 414.2252508108948 413.2179743442948 1 414.2250549197197 MULTI CID FTMS 0 0 0 7074 288195.4375 0.5302005945074065 -3 0.0355224609375 1 6 {M(Oxidation (M))|F} 1 -1 10.837 0.0 0.0 2.6227 0.0 0.0 248.17237910679324 0.0 248.17237910679324 0.0 0.6563945731965948 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.6227 - 3 + 1 1.541 52745.3 1.0 1814 5259 7074 SUDHL4_400M_050219_2,7075 SUDHL4_400M_050219_2,7075, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7076 36.584 667.0 125690.0 25 0 9352.5 + + -1 AVLPHVDQV 9 130 488.2676136643005 974.520674395401 2 489.2731811404228 MULTI CID FTMS 0 0 0 7074 105264.5 1.0 0 0.0 2 Oxidation (M) _M(Oxidation (M))PKNTKLQ_ ENSG00000164151|ENST00000296564|ICE1 12.531546534597751 0.7257836412119636 6 {[VA]|[{I|L}G]}[KC][R{I|L}]ASQ 9 -1 + 37.113 0.0 0.0 3.8083 3.8083 84.895 0.0 0.0 0.0 10.915149811213505 11.874081049124506 10.915149811213505 22.97173634870009 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}[KC][R{I|L}]ASQ;{[RE]|[WV]}KG{[TV]|[{I|L}S]}ASQ;{[ES]|[DT]|[{I|L}C]}[KG][R{I|L}]ASQ;[{I|L}A]TW[KA]ASQ;{[ES]|[DT]|[{I|L}C]}[RV][KA]ASQ;{[VA]|[{I|L}G]}GKK{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}C{I|L};[KP][{M(Oxidation (M))|F}V][KA]ASQ;{[ES]|[DT]|[{I|L}C]}[RV][RN]SQ;{[QV]|[N{I|L}]|[RA]|[KV]}KKEESQ;[PA]{I|L}[WR]W{M(Oxidation (M))|F} 3.8083;1.4511;1.4471;1.2709;1.1978;0.94032;0.83636;0.533;0.25712;0.20235 -;-;-;-;-;-;-;-;-;- 341 1 1.541 67711.9 1.0 1815 5259 7074 SUDHL4_400M_050219_2,7076 SUDHL4_400M_050219_2,7076,MPKNTKLQ False False AVLPHVDQV 36.583708 489.273181140423 752594.25 7074.0 ENSG00000164151|ENST00000296564|ICE1 2.496490279833476 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7078 36.596 576.0 216690.0 25 0 17060.0 1306 AIVDKVPSV 9 134 464.2791342711911 926.5437156091822 2 464.2791015505791 MULTI CID FTMS 0 0 0 7077 75203.890625 0.0287826499450163 14 -0.5392074584960938 1 Unmodified _AIVDKVPSV_ ENSG00000181789|ENST00000314797|COPG1 38.17557092003332 0.0854718145212029 6 [{I|L}A]VDKVPSV 9 0 + 42.443 0.0 0.0 4.5808 4.5808 86.196 0.0 0.0 0.0 20.623398807370435 14.761904821837533 14.761904821837533 16.591663953560953 0 1.2544321917401078 2.0 0.4916440611282626 0.0 + + [{I|L}A]VDKVPSV;[{I|L}A][KP]HP[HK];[{I|L}A]VDKV[VS]P;[KP]A{I|L}HP[HK];[PA]K{I|L}HP[HK];[{I|L}A]VDK[{I|L}T]AP;[KP]{I|L}AHP[HK] 4.5808;2.7901;2.6303;1.1175;1.0947;0.86461;0.79265 +;-;-;-;-;-;- + 595 + 1 1.541 98129.9 1.0 1816 5260 7077 SUDHL4_400M_050219_2,7078 SUDHL4_400M_050219_2,7078,AIVDKVPSV True True VIAPKITSV 36.596349 464.2794 359791.0625 7077.0 ENSG00000065526|ENST00000375759|SPEN 4.009006420771281 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7079 36.601 250.0 307890.0 25 0 71606.0 + 34369 SLTGRLDEV 9 96 495.2667002542488 988.5188475752976 2 495.2673828005791 MULTI CID FTMS 0 0 0 7077 205162.875 0.0736584850084411 -4 0.0540313720703125 2 Unmodified _SLTGRLDEV_ ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6 32.78568957990786 0.1150597335874693 6 {[TV]|[{I|L}S]}T 3 6 40.062 0.0 0.0 4.0527 0.0 0.0 0.0 684.3314750989881 684.3314750989881 19.670306400511706 0.0 0.0 0.0 0 1.0 2.0 0.2614393726401688 0.0 + {[TV]|[{I|L}S]}T 4.0527 + + 242 1 1.541 62822.0 1.0 1817 5260 7077 SUDHL4_400M_050219_2,7079 SUDHL4_400M_050219_2,7079,SLTGRLDEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7080 36.605 198.0 224090.0 25 0 16634.0 23773 LVASAVIGVV 10 85 464.2973759522746 926.5801989713492 2 464.2976562380791 MULTI CID FTMS 0 0 0 7077 88888.1875 1.0 0 0.0 3 Unmodified _LVASAVIGVV_ ENSG00000166546|ENST00000536005|BEAN1 17.44264345198275 0.5548713957087773 6 [{I|L}V]A 3 7 34.749 0.0 0.0 3.7503 0.0 0.0 0.0 640.3729342096311 640.3729342096311 10.268024924119672 0.0 0.0 0.0 0 0.7302046884880937 1.6989700043360187 0.0 0.0 + [{I|L}V]A 3.7503 + + 87 + 1 1.541 40725.2 1.0 1818 5260 7077 SUDHL4_400M_050219_2,7080 SUDHL4_400M_050219_2,7080,LVASAVIGVV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7081 36.619 800.0 135950.0 25 0 22669.0 + 10328 FSEEDYRTL 9 107 580.2664242773347 1158.5182956214694 2 580.2676269412041 MULTI CID FTMS 0 0 0 7077 85572.15625 0.4205112628019367 -2 0.0225677490234375 4 Unmodified _FSEEDYRTL_ ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4 55.50274090549119 0.0285720310785888 6 {M(Oxidation (M))|F}SEEDYRT{I|L} 9 0 + 71.819 0.0 0.0 6.1992 6.1992 86.967 0.0 0.0 0.0 8.129874666096661 8.129874666096661 8.129874666096661 8.129874666096661 0 0.3807196863200844 0.0 1.5138793319624575 0.0 + + {M(Oxidation (M))|F}SEEDYRT{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YR]{I|L}EESE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YR]{I|L}EEES;{M(Oxidation (M))|F}SEED{I|L}[HS][VP];{M(Oxidation (M))|F}SEE{I|L}[YR]C{I|L};{M(Oxidation (M))|F}SEE{I|L}D[HS][VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YR][HS]{M(Oxidation (M))|F}SE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YR]EE{I|L}SE;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YR]{I|L}[HC]S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YR]{I|L}[HC]{M(Oxidation (M))|F}S 6.1992;5.4974;4.719;4.4489;3.7738;3.55;3.5123;3.3603;2.9508;2.7988 +;-;-;-;-;-;-;-;-;- + 538 + 1 1.541 85863.3 0.4799999892711639 1819 5260 7077 SUDHL4_400M_050219_2,7081 SUDHL4_400M_050219_2,7081,FSEEDYRTL True True FSEEDYRTL 36.61861 580.267626941204 931423.8125 7077.0 ENSG00000111642|ENST00000544040|CHD4;;nc|ENSG00000111642|Q14839-2|CHD4 7.162144025166829 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7083 36.623 74.0 518080.0 25 0 104040.0 -1 TLPLPCTL 8 65 457.75622749960337 913.4979020660068 2 457.7562438845634 MULTI CID FTMS 0 0 0 7082 597268.8125 0.2842491602778058 6 -0.25360107421875 1 Carbamidomethyl (C) _TLPLPC(Carbamidomethyl (C))TL_ ENST00000589644.1_1_19:38799520-38799736:-|nuORF 13.50788311687929 0.7113601687236069 6 RNVGNT{I|L} 7 -1 34.257 0.0 0.0 3.7501 0.0 0.0 141.07881362129064 0.0 141.07881362129064 0.0 18.77259154210577 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 RNVGNT{I|L} 3.7501 - 139 1 1.541 38899.3 1.0 1820 5261 7082 SUDHL4_400M_050219_2,7083 SUDHL4_400M_050219_2,7083,TLPLPCTL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7084 36.629 330.0 200960.0 25 0 20876.0 + 10301 FSAGEPRVL 9 82 488.2676136643005 974.520674395401 2 488.2657043337822 MULTI CID FTMS 0 0 0 7082 145828.65625 0.785086919059457 6 -0.25360107421875 2 Unmodified _FSAGEPRVL_ ENSG00000183011|ENST00000575771|NAA38;nc|ENSG00000183011|Q9BRA0-2|NAA38 20.41453444215458 0.284085796332423 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP][RP]SE 8 5 + 42.197 0.0 0.0 4.33 4.33 86.497 0.0 0.0 0.0 1.935749724493121 31.359141346346 1.935749724493121 23.866223421386486 0 0.0 2.0 0.7302046884880937 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP][RP]SE;{M(Oxidation (M))|F}S[RP][RP]C{I|L} 4.33;1.881 -;- 64 1 1.541 57473.5 1.0 1821 5261 7082 SUDHL4_400M_050219_2,7084 SUDHL4_400M_050219_2,7084,FSAGEPRVL False True FSAGEPRVL 36.629385 488.265704333782 1605964.875 7082.0 nc|ENSG00000183011|Q9BRA0-2|NAA38;;ENSG00000183011|ENST00000575771|NAA38 5.708791891733806 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7085 36.633 196.0 454530.0 25 0 44351.0 + 22710 LQFPVGRVH 9 101 351.5381167925788 1051.5925209779364 3 351.5380737185478 MULTI CID FTMS 0 0 0 7082 320527.5625 0.5827604333328485 -1 0.034881591796875 3 Unmodified _LQFPVGRVH_ ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 28.486842064014134 0.1687311288560894 6 [VP][RD]VP 6 5 25.664 0.0 0.0 2.4405 0.0 0.0 0.0 385.18868187481536 385.18868187481536 12.169621623381282 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.7302046884880937 [VP][RD]VP 2.4405 - 48 1 1.541 78262.2 1.0 1822 5261 7082 SUDHL4_400M_050219_2,7085 SUDHL4_400M_050219_2,7085,LQFPVGRVH False True LQFPVGRVH 36.63313 351.538073718548 3764930.0625 7082.0 nc|ENSG00000246705|Q9BTM1-2|H2AJ;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000274997|ENST00000377459|H2AC12;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000196747|ENST00000358739|H2AC13;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000184270|ENST00000331128|H2AC21;;ENSG00000276903|ENST00000613174|H2AC16;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000180573|ENST00000377791|H2AC6;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000246705|ENST00000544848|H2AJ 3.412802537282308 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7086 36.647 800.0 158230.0 25 0 15489.0 22715 LQFSRRVF 8 127 526.8036841931637 1051.5928154531273 2 526.8038207888603 MULTI CID FTMS 0 0 0 7082 116874.1328125 0.6845071635395835 -1 0.034881591796875 4 Unmodified _LQFSRRVF_ ENST00000564314.5_3_16:24549118-24549208:+|nuORF 44.40701690623563 0.1655546087385432 6 [Q{I|L}]{M(Oxidation (M))|F}H[W{I|L}]P 7 5 47.751 0.0 0.0 4.5408 0.0 0.0 0.0 127.09193589673976 127.09193589673976 34.25591633931205 0.0 0.0 0.0 0 1.3807196863200843 1.0457574905606752 0.0 0.75 [Q{I|L}]{M(Oxidation (M))|F}H[W{I|L}]P 4.5408 - 758 1 1.541 99406.8 0.5400000214576721 1823 5261 7082 SUDHL4_400M_050219_2,7086 SUDHL4_400M_050219_2,7086,LQFSRRVF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7087 36.661 800.0 157540.0 25 0 11446.0 + 20162 LKPGILPVPK 10 134 531.3577347660307 1060.700916598861 2 531.3577148318291 MULTI CID FTMS 0 0 0 7082 100617.484375 0.0347175293747332 40 -1.347942352294922 5 Unmodified _LKPGILPVPK_ REV__ENSG00000143653|ENST00000366510|SCCPDH 17.86316937532769 0.5478153791579383 6 K{I|L}AP{I|L}VKD{I|L} 9 -1 68.387 0.0 0.0 6.4473 0.0 0.0 0.0 80.05114923648671 80.05114923648671 47.492246672239325 0.0 0.0 0.0 0 1.8807196863200843 0.0 1.0941876774005248 0.0 K{I|L}AP{I|L}VKD{I|L} 6.4473 - 601 + 1 1.541 100647.7 0.5099999904632568 1824 5261 7082 SUDHL4_400M_050219_2,7087 SUDHL4_400M_050219_2,7087,LKPGILPVPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7088 36.675 800.0 82284.0 25 0 7101.1 + 17093 KLFDRPQEL 9 93 573.3194686554598 1144.6243843777197 2 573.3204833865166 MULTI CID FTMS 0 0 0 7082 90507.21875 1.0 0 0.0 6 Unmodified _KLFDRPQEL_ ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;ENST00000494124.2_1_9:19316810-19337609:+|nuORF;nc|ENSG00000137145|Q5VZ89-3|DENND4C;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89|DENND4C 14.218169984304629 0.4518140821082705 6 K{I|L}{M(Oxidation (M))|F}DR{[C(Carbamidomethyl (C))E]|[WC]}{I|L} 8 2 45.878 0.0 0.0 4.0082 0.0 0.0 0.0 80.05114160709218 80.05114160709218 33.65987537940164 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 K{I|L}{M(Oxidation (M))|F}DR{[C(Carbamidomethyl (C))E]|[WC]}{I|L} 4.0082 - 79 + 1 1.541 53602.2 0.4799999892711639 1825 5261 7082 SUDHL4_400M_050219_2,7088 SUDHL4_400M_050219_2,7088,KLFDRPQEL False True KLFDRPQEL 36.674632 573.320483386517 383088.78125 7082.0 ENST00000494124.2_1_9:19316810-19337609:+|nuORF;;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;;nc|ENSG00000137145|Q5VZ89-5|DENND4C;;nc|ENSG00000137145|Q5VZ89|DENND4C;;nc|ENSG00000137145|Q5VZ89-3|DENND4C;;ENSG00000137145|ENST00000434457|DENND4C 4.241529544194539 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7090 36.68 60.0 652320.0 25 0 31604.0 -1 RLMNDMTAV 9 77 541.7516962118151 1081.48883949043 2 541.7521850466728 MULTI CID FTMS 0 0 0 7089 905929.0625 0.3809439371452155 6 -0.237091064453125 1 2 Oxidation (M) _RLM(Oxidation (M))NDM(Oxidation (M))TAV_ ENSG00000120694|ENST00000320027|HSPH1;nc|ENSG00000120694|Q92598-2|HSPH1;nc|ENSG00000120694|Q92598-3|HSPH1;nc|ENSG00000120694|Q92598-4|HSPH1 26.268140514670165 0.1969607489560049 6 ND{M(Oxidation (M))|F}TAV 6 -1 46.631 0.0 0.0 4.3117 0.0 0.0 416.220506736525 0.0 416.220506736525 0.0 32.95880017344075 0.0 0.0 0 0.5 0.0 0.5 0.0 ND{M(Oxidation (M))|F}TAV 4.3117 + + 123 1 1.541 35665.0 1.0 1826 5262 7089 SUDHL4_400M_050219_2,7090 SUDHL4_400M_050219_2,7090,RLMNDMTAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7091 36.685 269.0 222080.0 25 0 29863.0 -1 0 81 909.0588667010333 2724.154770703299 3 909.3947021365166 MULTI CID FTMS 0 0 0 7089 272490.03125 0.8214732871043006 -2 0.0909004211425781 2 6 [YG]SA[QT]Q[TP]Y 10 -1 49.42 0.0 0.0 1.8141 0.0 0.0 0.0 1624.6530778090953 1624.6530778090953 8.962301525394615 0.0 0.0 0.0 0 0.0 2.0 1.3556270500406935 0.6989700043360187 [YG]SA[QT]Q[TP]Y 1.8141 - 1583 1 1.541 47919.6 1.0 1827 5262 7089 SUDHL4_400M_050219_2,7091 SUDHL4_400M_050219_2,7091, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7092 36.699 800.0 151360.0 25 0 12255.0 + 29400 QLDPQTVGV 9 126 478.7557844131217 955.4970158930436 2 478.7564269900322 MULTI CID FTMS 0 0 0 7089 105846.7421875 0.9870169559882144 -2 0.0909004211425781 3 Unmodified _QLDPQTVGV_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 46.020951573049366 0.0490941689151868 6 [QP]TC[RP]VR 8 7 + 20.028 0.0 0.0 2.096 2.096 79.68 0.0 0.0 0.0 0.1182529046524614 3.2038628538628053 0.1182529046524614 11.139433523068362 0 0.6677353201839438 0.0 0.9247425010840048 0.0 [QP]TC[RP]VR;[QT]PC[RP]VR;[VP][NP]ACTVR 2.096;0.93021;0.48138 -;-;- 248 1 1.541 95394.1 0.9200000166893004 1828 5262 7089 SUDHL4_400M_050219_2,7092 SUDHL4_400M_050219_2,7092,QLDPQTVGV True True QLDPQTVGV 36.698805 478.756426990032 793388.875 7089.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 4.485427697499593 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7093 36.703 221.0 235830.0 25 0 19198.0 + 1467 ALFGGSQKY 9 100 485.7531849384226 969.4918169436452 2 485.7535583376884 MULTI CID FTMS 0 0 0 7089 99939.453125 0.2586838796743882 -9 0.2573738098144531 4 Unmodified _ALFGGSQKY_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 18.1463463914782 0.3454829746528889 6 [{I|L}A]{M(Oxidation (M))|F}GN{[SA]|[TG]}KY 9 2 + 46.309 0.0 0.0 4.7766 4.7766 84.076 0.0 0.0 0.0 33.544752778449514 3.733806366653028 3.733806366653028 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}A]{M(Oxidation (M))|F}GN{[SA]|[TG]}KY;[{I|L}A]{M(Oxidation (M))|F}GGG{[SA]|[TG]}KY;[{I|L}A]{M(Oxidation (M))|F}GN[YK]{[SA]|[TG]};[{I|L}A]{[WN]|[YH]}{[QN]|[E{I|L}]|[KN]}[QP];[{I|L}A][WD][Q{I|L}][QP];[{I|L}A]{M(Oxidation (M))|F}GGG[YK]{[SA]|[TG]} 4.7766;3.8268;2.8715;2.6;2.4184;1.9217 -;-;-;-;-;- 206 + 1 1.541 42768.8 1.0 1829 5262 7089 SUDHL4_400M_050219_2,7093 SUDHL4_400M_050219_2,7093,ALFGGSQKY False True ALFGGSQKY 36.702965 485.753558337688 3496844.25 7089.0 ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8 4.864993731180827 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7094 36.713 592.0 187390.0 25 0 17070.0 + 42621 VTTDIQVKV 9 131 501.7954629895316 1001.5763730458632 2 501.7955505251884 MULTI CID FTMS 0 0 0 7089 97073.75 0.4531396854909847 -2 0.0909004211425781 5 Unmodified _VTTDIQVKV_ ENSG00000196235|ENST00000432763|SUPT5H;ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H 45.739877483867886 0.0497104363764649 6 VTTD{I|L}QVKV 9 0 + 82.735 0.0 0.0 8.2605 8.2605 85.702 0.0 0.0 0.0 33.4160005977872 1.9963613405956977 1.9963613405956977 1.9963613405956977 0 1.2302046884880935 2.0 0.0 0.4423877696554315 + + VTTD{I|L}QVKV;VTTD{I|L}QVVK;VTTD{I|L}[AG]VKV;VTTD{I|L}[AG]VVK;VTT[KA]{[WT]|[RM]}PV;V[WM]{I|L}QVKV;V[WM]{I|L}QVVK;V[WM]{I|L}[AG]VKV;V[WM]{I|L}[AG]VVK 8.2605;8.0611;7.3411;7.1418;4.4814;3.6212;3.4219;2.6964;2.4971 +;-;-;-;-;-;-;-;- + 1947 + 1 1.541 88759.9 1.0 1830 5262 7089 SUDHL4_400M_050219_2,7094 SUDHL4_400M_050219_2,7094,VTTDIQVKV True True VTTDIQVKV 36.713313 501.795550525188 946403.375 7089.0 ENSG00000196235|ENST00000432763|SUPT5H;;nc|ENSG00000196235|O00267-2|SUPT5H;;ENST00000599335.5_1_19:39959399-39965382:+|nuORF 5.847138086954753 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7095 36.727 800.0 103970.0 25 0 5449.1 + 8336 ERQQQQWNVI 10 103 664.83813910919 1327.66172528518 2 664.8384887576103 MULTI CID FTMS 0 0 0 7089 94231.109375 0.9295566326688286 -1 0.0560188293457031 6 Unmodified _ERQQQQWNVI_ REV__ENSG00000179271|ENST00000316939|GADD45GIP1 20.41453444215458 0.5050059513928961 6 NQ{I|L}PSQSANV{I|L} 11 -1 87.046 0.0 0.0 6.5563 0.0 0.0 158.06936843086095 0.0 158.06936843086095 0.0 57.25112780681815 0.0 0.0 0 0.4247425010840047 0.0 2.1549471895720984 0.3807196863200844 NQ{I|L}PSQSANV{I|L} 6.5563 - 2659 1 1.541 64153.4 0.4799999892711639 1831 5262 7089 SUDHL4_400M_050219_2,7095 SUDHL4_400M_050219_2,7095,ERQQQQWNVI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7096 36.741 775.0 118580.0 25 0 7521.2 + 42727 VVDAVVTQV 9 138 465.26898786191725 928.5234227906344 2 465.2693359255791 MULTI CID FTMS 0 0 0 7089 91066.328125 1.0 0 0.0 7 Unmodified _VVDAVVTQV_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 39.957323273325 0.0756908302845263 6 [{I|L}A]EAV[QT]VV 9 5 + 22.641 0.0 0.0 2.4384 2.4384 70.447 0.0 0.0 0.0 1.7609125905568137 0.9151498112134996 0.9151498112134996 1.7609125905568137 0 0.0 2.0 0.0 0.0 [{I|L}A]EAV[QT]VV;VVDAV[QT]VV;{NN|[MP]|[D{I|L}]|[EV]}GVV[QT]VV;[{I|L}A]EK[RD]VV;{[VA]|[{I|L}G]}DVV[QT]VV;VVDK[RD]VV;{[DA]|[EG]}VVV[QT]VV;[AG]T{I|L}V[RD]VV;[{I|L}V][DG]V[QT]VV;[QT]{I|L}V[RD]VV 2.4384;2.2488;2.1912;1.6746;1.6004;1.485;1.2065;0.89285;0.85604;0.75359 -;-;-;-;-;-;-;-;-;- 426 1 1.541 74939.8 1.0 1832 5262 7089 SUDHL4_400M_050219_2,7096 SUDHL4_400M_050219_2,7096,VVDAVVTQV True True VVDAVVTQV 36.740561 465.269335925579 403662.0 7089.0 ENST00000526368.1_1_11:62530297-62533976:+|nuORF;;ENSG00000168002|ENST00000301788|POLR2G;;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 4.311431010564168 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7098 36.748 199.0 236150.0 25 0 22237.0 + -1 SEVMGEPHL 9 83 507.7314946897257 1013.4484364462514 2 507.7317687869072 MULTI CID FTMS 0 0 0 7097 224335.328125 0.2400557061166443 5 -0.1711654663085937 1 Oxidation (M) _SEVM(Oxidation (M))GEPHL_ ENSG00000132963|ENST00000380842|POMP 26.88365393820708 0.1891292719743517 6 {[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}{[DA]|[EG]}PH{I|L} 9 -1 + 35.111 0.0 0.0 3.4645 3.4645 81.679 0.0 0.0 0.0 23.72872192056825 8.37250545750998 8.37250545750998 10.54113429432413 0 0.9247425010840048 0.0 0.0 0.0 {[ES]|[DT]|[{I|L}C]}V{M(Oxidation (M))|F}{[DA]|[EG]}PH{I|L};{[ES]|[DT]|[{I|L}C]}V[YR]VD{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}S[YR]VD{M(Oxidation (M))|F};{[TV]|[{I|L}S]}D[YR]VD{M(Oxidation (M))|F} 3.4645;2.4244;1.8529;1.0554 +;-;-;- + 95 + 1 1.541 41216.2 1.0 1833 5263 7097 SUDHL4_400M_050219_2,7098 SUDHL4_400M_050219_2,7098,SEVMGEPHL False False SEVMGEPHL 36.748219 507.731768786907 10055067.0 7097.0 ENSG00000132963|ENST00000380842|POMP 8.502250989278158 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7099 36.756 427.0 192270.0 25 0 37783.0 + 9281 FIAPTGHSL 9 113 471.7557312613339 941.4969095894678 2 471.7563354372978 MULTI CID FTMS 0 0 0 7097 40112.328125 0.0629123802645232 8 -0.2742919921875 2 Unmodified _FIAPTGHSL_ ENSG00000125354|ENST00000394610|SEPTIN6;ENSG00000138758|ENST00000264893|SEPTIN11;nc|ENSG00000125354|Q14141-3|SEPTIN6;nc|ENSG00000125354|Q14141-4|SEPTIN6;nc|ENSG00000125354|Q14141|SEPTIN6;nc|ENSG00000138758|Q9NVA2-2|SEPTIN11 42.09456458481378 0.0639583784996157 6 {M(Oxidation (M))|F}{I|L}AP[HA]TSV 9 4 + 34.567 0.0 0.0 3.6715 3.6715 75.114 0.0 0.0 0.0 21.46767826554119 2.6676592681383298 2.6676592681383298 3.486446888048114 0 0.7742275032520141 0.0 0.555462187404089 0.0 {M(Oxidation (M))|F}{I|L}AP[HA]TSV;{M(Oxidation (M))|F}{I|L}AP[HA]{[WT]|[RM]};{M(Oxidation (M))|F}{I|L}AP[HA]{[CA]|SS}{I|L};{M(Oxidation (M))|F}{I|L}AP{[SA]|[TG]}[HS]{I|L};{M(Oxidation (M))|F}{I|L}{NN|[MP]|[D{I|L}]|[EV]}[QP]P{I|L};{M(Oxidation (M))|F}{I|L}AP{[SA]|[TG]}[HT]V;{M(Oxidation (M))|F}{I|L}[KT]{M(Oxidation (M))|F}{[WT]|[RM]};[PA]H{M(Oxidation (M))|F}[KT]{I|L}E;[PA][QA][WK]{I|L}E;{M(Oxidation (M))|F}{I|L}[KT]{[YC]|[HE]}[PA] 3.6715;3.3011;3.1627;2.843;2.6102;2.2876;2.2005;2.0705;1.0896;0.28007 -;-;-;+;-;-;-;-;-;- + 200 + 1 1.541 67368.9 1.0 1834 5263 7097 SUDHL4_400M_050219_2,7099 SUDHL4_400M_050219_2,7099,FIAPTGHSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7101 36.761 96.0 400060.0 25 0 55995.0 -1 DVNECKVF 8 76 505.7341941059091 1009.4538352786184 2 505.7342101931572 MULTI CID FTMS 0 0 0 7100 548387.875 1.0 0 0.0 1 Carbamidomethyl (C) _DVNEC(Carbamidomethyl (C))KVF_ ENSG00000142449|ENST00000600128|FBN3 24.67388899826682 0.525179942228231 6 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 2 -1 19.464 0.0 0.0 1.9282 0.0 0.0 697.3107821553746 0.0 697.3107821553746 0.0 7.870156338638594 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 1.9282 - 49 + 1 1.541 33698.5 1.0 1835 5264 7100 SUDHL4_400M_050219_2,7101 SUDHL4_400M_050219_2,7101,DVNECKVF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7102 36.763 128.0 429670.0 25 0 72954.0 + -1 NVIERLQEA 9 70 536.2972078809644 0 536.2927734255791 PEAK CID FTMS 0 0 0 7100 402716.4375 0.8185975089770242 -1 0.0152664184570312 2 Carbamidomethyl (C) _VNLEKPVIC(Carbamidomethyl (C))_ ENSG00000126756|ENST00000333119|UXT;nc|ENSG00000126756|Q9UBK9-2|UXT 18.1463463914782 0.2188250594445807 6 {I|L} 1 -1 13.979 0.0 0.0 1.3058 0.0 0.0 213.11145217109527 741.3611182821068 954.472570453202 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L} 1.3058 + + 61 1 1.541 47961.6 1.0 1836 5264 7100 SUDHL4_400M_050219_2,7102 SUDHL4_400M_050219_2,7102,VNLEKPVIC False False NVIERLQEA 36.76324 536.292773425579 2475071.5 7100.0 ENSG00000126756|ENST00000333119|UXT;;nc|ENSG00000126756|Q9UBK9-2|UXT 3.9351805051167807 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7103 36.771 408.0 267300.0 25 0 19535.0 + 44141 YLDPAQQNL 9 145 531.2662176372421 1060.517882341284 2 531.2668945193291 MULTI CID FTMS 0 0 0 7100 138464.375 0.1738659762139434 -4 0.1720924377441406 3 Unmodified _YLDPAQQNL_ ENST00000421406.1_1_1:247353282-247372753:-|nuORF 36.12702656103203 0.0967173616627612 6 [Y{I|L}]DPAQQN{I|L} 9 0 + 35.033 0.0 0.0 3.3033 3.3033 73.127 0.0 0.0 0.0 2.8910699807951303 6.439389643433636 2.8910699807951303 2.8910699807951303 0 0.4731975075880329 2.0 0.0 0.0 + + [Y{I|L}]DPAQQN{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPAQQN{I|L};[Y{I|L}]DPA[AG]QN{I|L};[Y{I|L}]DPAQ[AG]N{I|L};[Y{I|L}]DM[RH]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPA[AG]QN{I|L};{NN|[MP]|[D{I|L}]|[EV]}YPAQ[AG]N{I|L};[NS]E{[TV]|[{I|L}S]}ERN{I|L};{NN|[MP]|[D{I|L}]|[EV]}YM[RH]N{I|L};[PA]QDQD{I|L}K{M(Oxidation (M))|F} 3.3033;3.0307;2.4351;2.4351;2.269;2.1625;2.1625;2.1155;1.9964;1.9574 +;-;-;-;-;-;-;-;-;- + 1001 1 1.541 84121.5 1.0 1837 5264 7100 SUDHL4_400M_050219_2,7103 SUDHL4_400M_050219_2,7103,YLDPAQQNL True True YLDPAQQNL 36.770532 531.266894519329 9238203.0 7100.0 ENST00000421406.1_1_1:247353282-247372753:-|nuORF 4.627864837646484 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7104 36.776 306.0 251550.0 25 0 17626.0 + 31235 RLSELGITQA 10 92 544.3090992259595 1086.6036455187188 2 544.3092529177666 MULTI CID FTMS 0 0 0 7100 145613.046875 0.3354208999635182 -4 0.1720924377441406 4 Unmodified _RLSELGITQA_ ENSG00000171241|ENST00000303383|SHCBP1 26.020703789607367 0.3840598856887971 6 [QT][KQ]{I|L}G{I|L}TQA 10 4 + 44.899 0.0 0.0 4.1321 4.1321 84.172 0.0 0.0 0.0 3.177418734074564 34.41483608233659 3.177418734074564 12.70223796010464 0 0.8371804965004639 0.0 0.6861818737241735 0.0 [QT][KQ]{I|L}G{I|L}TQA;{[CP]|[EA]}T[{I|L}A]{I|L}G{I|L}G{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}T][RD]{I|L}G{I|L}TQA;{[VA]|[{I|L}G]}[KS]{[NV]|[RG]}G{I|L}TQA;[VS][W{I|L}]{I|L}G{I|L}TQA;[QT][KQ]{I|L}G{I|L}G{[QD]|[EN]|[WG]|[KD]|[RS]};[VS]D[{I|L}A]{I|L}G{I|L}G{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}T][RD]{I|L}G{I|L}G{[QD]|[EN]|[WG]|[KD]|[RS]};{[VA]|[{I|L}G]}[KS]{[NV]|[RG]}G{I|L}G{[QD]|[EN]|[WG]|[KD]|[RS]};[VS][W{I|L}]{I|L}G{I|L}G{[QD]|[EN]|[WG]|[KD]|[RS]} 4.1321;2.9631;2.963;2.9371;2.9331;2.8076;2.4438;1.6384;1.6126;1.6086 -;-;-;-;-;-;-;-;-;- 265 1 1.541 62851.3 1.0 1838 5264 7100 SUDHL4_400M_050219_2,7104 SUDHL4_400M_050219_2,7104,RLSELGITQA False True RLSELGITQA 36.776142 544.309252917767 2226317.25 7100.0 ENSG00000171241|ENST00000303383|SHCBP1 4.2505083084106445 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7105 36.781 267.0 235720.0 25 0 51426.0 -1 0 89 398.2300484747443 794.4455440162886 2 398.2305786013603 MULTI CID FTMS 0 0 0 7100 130989.5 0.2443502019606711 -13 0.4295158386230469 5 6 {M(Oxidation (M))|F} 1 -1 2.2185 0.0 0.0 0.27925 0.0 0.0 397.2537848383574 247.09668909244377 644.3504739308012 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.27925 - 9 + 1 1.541 55008.7 1.0 1839 5264 7100 SUDHL4_400M_050219_2,7105 SUDHL4_400M_050219_2,7105, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7106 36.795 800.0 96066.0 25 0 6268.2 + 17944 KQYEVEIQTY 10 107 650.8245145978995 1299.6344762625988 2 650.8245727419853 MULTI CID FTMS 0 0 0 7100 118796.734375 1.0 0 0.0 6 Unmodified _KQYEVEIQTY_ ENSG00000117724|ENST00000366955|CENPF 51.41523569358685 0.0718446036348414 6 [YT]QRVE{I|L}QTY 10 4 + 85.338 0.0 0.0 6.5663 6.5663 88.304 0.0 0.0 0.0 8.668855839439829 11.20506544868192 8.668855839439829 8.668855839439829 0 1.1331596456423734 1.2218487496163564 1.4876954943324543 0.8494850021680094 [YT]QRVE{I|L}QTY;[QT]YRVE{I|L}QTY;[YT]QRVE{I|L}[AG]TY;[YT]Q[VG]VE{I|L}QTY;[YT][AG]RVE{I|L}QTY;[YE]QKVE{I|L}QTY;[YT]Q{I|L}AAE{I|L}QTY;[QT]Y[VG]VE{I|L}QTY;[QT]YRVE{I|L}[AG]TY;[YT]Q[VG]VNKQTY 6.5663;5.8993;5.8612;5.8612;5.5343;5.3366;5.2705;5.1941;5.1941;5.1672 -;-;-;-;-;-;-;-;-;- 2922 1 1.541 64227.0 0.550000011920929 1840 5264 7100 SUDHL4_400M_050219_2,7106 SUDHL4_400M_050219_2,7106,KQYEVEIQTY True True KQYEVEIQTY 36.794902 650.824572741985 732483.3125 7100.0 ENSG00000117724|ENST00000366955|CENPF 6.478387832641602 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7107 36.803 484.0 139650.0 25 0 12490.0 + 18394 KVTEGSFVY 9 106 515.2649436076715 1028.515334282143 2 515.2663452029228 MULTI CID FTMS 0 0 0 7100 104637.6875 0.922752862498454 -1 0.0152664184570312 7 Unmodified _KVTEGSFVY_ ENSG00000057608|ENST00000380191|GDI2 36.12702656103203 0.0967173616627612 6 {[WS]|[C(Carbamidomethyl (C)){I|L}]}[K{I|L}]S{M(Oxidation (M))|F}VY 8 5 + 51.292 0.0 0.0 4.987 4.987 79.583 0.0 0.0 0.0 2.007046801327732 34.63615337528019 2.007046801327732 3.872636521980226 0 1.0 0.0 1.1861818737241734 0.3054621874040891 {[WS]|[C(Carbamidomethyl (C)){I|L}]}[K{I|L}]S{M(Oxidation (M))|F}VY;{[ET]|[MV]}QYVKVY;{[ET]|[MV]}QVYKVY;{[ET]|[MV]}[RK]S{M(Oxidation (M))|F}VY;{[WS]|[C(Carbamidomethyl (C)){I|L}]}[{M(Oxidation (M))|F}T]VKVY;{[ET]|[MV]}[AG]YVKVY;{[ET]|[MV]}[AG]VYKVY;[QA]V{M(Oxidation (M))|F}R{M(Oxidation (M))|F}VY;{[DA]|[EG]}[TA]YVKVY;{[DA]|[EG]}[TA]VYKVY 4.987;4.6104;4.5305;4.5231;4.3005;3.7099;3.63;3.5037;3.323;3.243 -;-;-;-;-;-;-;-;-;- 253 1 1.541 57353.7 1.0 1841 5264 7100 SUDHL4_400M_050219_2,7107 SUDHL4_400M_050219_2,7107,KVTEGSFVY True True KVTEGSFVY 36.803473 515.266345202923 697890.75 7100.0 ENSG00000057608|ENST00000380191|GDI2 5.226078192392985 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7109 36.808 75.0 659040.0 25 0 32878.0 + 31136 RLNDFASTV 9 89 511.7660256408653 1021.5174983485306 2 511.7666503787041 MULTI CID FTMS 0 0 0 7108 548403.0625 0.640820140616818 1 -0.0138168334960937 1 Unmodified _RLNDFASTV_ ENSG00000178741|ENST00000322347|COX5A 31.26834338654808 0.1333407332142048 6 {[TV]|[{I|L}S]}S[NP]{M(Oxidation (M))|F}ASTV 10 3 + 65.411 0.0 0.0 6.4033 6.4033 91.135 0.0 0.0 0.0 11.094790571181337 15.026975159433531 11.094790571181337 11.094790571181337 0 0.5 1.154901959985743 1.424742501084005 0.0 {[TV]|[{I|L}S]}S[NP]{M(Oxidation (M))|F}ASTV;{[MG]|[TS]}V[NP]{M(Oxidation (M))|F}ASTV;{[TV]|[{I|L}S]}S[NP]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HE[RH]TV;{[MG]|[TS]}V[NP]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;{[WT]|[RM]}[NP]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V;[W{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[NV]|[RG]}TV;[W{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[WK]V 6.4033;5.3172;3.7848;3.4415;2.6987;2.3147;1.7282;0.31226 -;-;-;-;-;-;-;- 225 1 1.541 44123.5 1.0 1842 5265 7108 SUDHL4_400M_050219_2,7109 SUDHL4_400M_050219_2,7109,RLNDFASTV False True RLNDFASTV 36.808269 511.766650378704 4751949.5 7108.0 ENSG00000178741|ENST00000322347|COX5A 5.208212852478027 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7110 36.817 513.0 114020.0 25 0 11648.0 + 32427 SAAQPGVAF 9 104 424.2190506450983 846.4235483569965 2 424.2188903689384 MULTI CID FTMS 0 0 0 7108 118392.4140625 0.4565209938643831 4 -0.1349105834960937 2 Unmodified _SAAQPGVAF_ ENSG00000108061|ENST00000369452|SHOC2;nc|ENSG00000108061|Q9UQ13-2|SHOC2 25.399314129420983 0.2080152500878129 6 {[SA]|[TG]}AQ 4 5 21.205 0.0 0.0 2.5052 0.0 0.0 0.0 486.2355960467028 486.2355960467028 0.2356104680422852 0.0 0.0 0.0 0 0.5 1.0969100130080565 0.2215141619232908 0.0 + {[SA]|[TG]}AQ 2.5052 + + 162 1 1.541 51396.8 1.0 1843 5265 7108 SUDHL4_400M_050219_2,7110 SUDHL4_400M_050219_2,7110,SAAQPGVAF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7112 36.831 582.0 161860.0 25 0 11186.0 + 34492 SMMDVDHQI 9 133 554.225449363305 1106.4363457934098 2 554.2260619997978 MULTI CID FTMS 0 0 0 7111 147919.25 0.5306539216284184 -2 0.0614738464355468 1 2 Oxidation (M) _SM(Oxidation (M))M(Oxidation (M))DVDHQI_ ENSG00000150753|ENST00000280326|CCT5;ENST00000508451.1_1_5:10250422-10254994:+|nuORF 70.33199760932243 0.0209706178985989 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}DVDHQ{I|L} 9 0 + 66.891 0.0 0.0 6.0456 6.0456 92.339 0.0 0.0 0.0 54.41630954681237 21.93742728819068 21.93742728819068 25.24735947860492 0 1.6237125054200234 0.0 0.0 1.6039171939081172 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}DVDHQ{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}DVDH[AG]{I|L};[HQ][{M(Oxidation (M))|F}V]VD{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[CS][Y{I|L}]Q{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[DG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}Q{I|L};AAEE[{I|L}P]D{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}[KC]QQGY;{[QN]|[E{I|L}]|[KN]}[HD][KC]{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YR][HT][C(Carbamidomethyl (C))H] 6.0456;3.7637;3.655;1.9807;1.8931;1.5029;0.9958;0.85205;0.17495 +;-;-;-;-;-;-;-;- + 392 + 1 1.541 72070.5 1.0 1844 5266 7111 SUDHL4_400M_050219_2,7112 SUDHL4_400M_050219_2,7112,SMMDVDHQI True False SMMDVDHQI 36.831388 554.226061999798 1290137.375 7111.0 ENSG00000150753|ENST00000280326|CCT5;;ENST00000508451.1_1_5:10250422-10254994:+|nuORF 9.590331236521402 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7113 36.839 404.0 145820.0 25 0 20213.0 + 35036 SQRAGLQF 8 84 453.7429551852523 905.4713574373046 2 453.7429992556572 MULTI CID FTMS 0 0 0 7111 98544.078125 0.8860182506395787 -1 0.0138168334960937 2 Unmodified _SQRAGLQF_ ENSG00000105968|ENST00000308153|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-2|H2AZ2;nc|ENSG00000105968|Q71UI9-5|H2AZ2 16.149105407346934 0.6723412507259107 6 [AG]SRQ{I|L}Q{M(Oxidation (M))|F} 8 5 + 47.846 0.0 0.0 5.2841 5.2841 83.341 0.0 0.0 0.0 7.166987712964499 16.40978057358332 7.166987712964499 7.166987712964499 0 0.8494850021680094 1.5228787452803376 0.0 0.0 [AG]SRQ{I|L}Q{M(Oxidation (M))|F};{[QS]|[NT]}RQ{I|L}Q{M(Oxidation (M))|F};[AG]SR[AG]{I|L}Q{M(Oxidation (M))|F};[AG]SRQ{I|L}[AG]{M(Oxidation (M))|F};{[QS]|[NT]}R[AG]{I|L}Q{M(Oxidation (M))|F};{[QS]|[NT]}RQ{I|L}[AG]{M(Oxidation (M))|F};[AG]SR[AG]{I|L}[AG]{M(Oxidation (M))|F};{[QS]|[NT]}R[AG]{I|L}[AG]{M(Oxidation (M))|F} 5.2841;4.4925;4.2612;4.2612;3.4621;3.4621;3.2442;2.4392 -;-;-;-;+;-;-;- + 79 1 1.541 52003.2 1.0 1845 5266 7111 SUDHL4_400M_050219_2,7113 SUDHL4_400M_050219_2,7113,SQRAGLQF False True SQRAGLQF 36.838594 453.742999255657 637063.0625 7111.0 nc|ENSG00000105968|Q71UI9-5|H2AZ2;;ENSG00000105968|ENST00000308153|H2AZ2;;ENSG00000164032|ENST00000296417|H2AZ1;;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;;nc|ENSG00000105968|Q71UI9-2|H2AZ2 4.569509426752727 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7114 36.852 800.0 103960.0 25 0 7464.4 23174 LSREQVEAI 9 123 522.7879845355302 1043.5614161378603 2 522.7885009646416 MULTI CID FTMS 0 0 0 7111 90905.3671875 0.9933291104769238 1 -0.0549163818359375 3 Unmodified _LSREQVEAI_ ENSG00000156049|ENST00000341700|GNA14 18.1463463914782 0.3454829746528889 6 [Q{I|L}]RSEVAE{I|L} 9 5 + 37.067 0.0 0.0 3.5519 3.5519 72.404 0.0 0.0 0.0 0.6965312505796959 20.868734474099227 0.6965312505796959 1.7574016361754443 0 0.3807196863200844 0.0 0.0 0.1989700043360188 [Q{I|L}]RSEVAE{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]EVAE{I|L};[AG]{I|L}RSEVAE{I|L};{[CP]|[EA]}[RK]EVAE{I|L};{[VA]|[{I|L}G]}ARSEVAE{I|L};{[VA]|[{I|L}G]}W{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VAE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[Q{I|L}]EVAE{I|L};[Q{I|L}]RST[TP]E{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KQ]T[TP]E{I|L};[AG]{I|L}RST[TP]E{I|L} 3.5519;3.3835;3.2232;3.0558;2.7405;2.386;2.3101;1.7551;1.5867;1.4264 -;-;-;-;-;-;-;-;-;- 470 1 1.541 66913.5 0.4900000095367431 1846 5266 7111 SUDHL4_400M_050219_2,7114 SUDHL4_400M_050219_2,7114,LSREQVEAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7115 36.866 800.0 80816.0 25 0 6532.7 -1 0 77 585.0844256349328 2336.308596673331 4 585.3345825076103 MULTI CID FTMS 0 0 0 7111 62779.03125 1.0 0 0.0 4 6 [C(Carbamidomethyl (C))H]P{M(Oxidation (M))|F}PP 6 -1 28.416 0.0 0.0 1.2163 0.0 0.0 0.0 1597.9414368451894 1597.9414368451894 7.447274948966935 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [C(Carbamidomethyl (C))H]P{M(Oxidation (M))|F}PP 1.2163 - 119 + 1 1.541 56278.5 0.4399999976158142 1847 5266 7111 SUDHL4_400M_050219_2,7115 SUDHL4_400M_050219_2,7115, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7116 36.872 329.0 243300.0 25 0 63178.0 + 15097 IMLVNPLN 8 81 457.2643827811424 0 457.2649108767509 PEAK CID FTMS 0 0 0 7111 137300.625 0.7452421190487317 -1 0.0138168334960937 5 Unmodified _IMLVNPLN_ REV__ENSG00000015133|ENST00000389857|CCDC88C;REV__ENST00000553437.1_1_14:91808648-91875041:-|nuORF 9.347437153973935 0.5488964601725408 6 NGK 3 -1 12.703 0.0 0.0 1.3921 0.0 0.0 231.1597947597474 379.1754549615844 610.3352497213318 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NGK 1.3921 - 37 + 1 1.541 70120.4 1.0 1848 5266 7111 SUDHL4_400M_050219_2,7116 SUDHL4_400M_050219_2,7116,IMLVNPLN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7118 36.877 46.0 810690.0 25 0 191400.0 + 34370 SLTGRLDEV 9 60 495.2667002542488 988.5188475752976 2 495.2668029665947 MULTI CID FTMS 0 0 0 7117 1074225.5 0.385673201779002 3 -0.1068153381347656 1 Unmodified _SLTGRLDEV_ ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-2|STAT6;nc|ENSG00000166888|P42226-3|STAT6 27.628801355627647 0.1796483985696185 6 EVTV 4 7 27.964 0.0 0.0 2.8289 0.0 0.0 542.2813587873062 0.0 542.2813587873062 0.0 14.424712680444358 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 EVTV 2.8289 - 38 1 1.541 32974.2 1.0 1849 5267 7117 SUDHL4_400M_050219_2,7118 SUDHL4_400M_050219_2,7118,SLTGRLDEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7119 36.881 238.0 279950.0 25 0 35369.0 + -1 TVSKMCAAM 9 96 479.2154125241268 0 479.2159911990166 PEAK CID FTMS 0 0 0 7117 134887.421875 0.9980341739732912 -4 0.1316566467285156 2 Oxidation (M) _TVSKMCAAM(Oxidation (M))_ REV__ENSG00000164924|ENST00000395958|YWHAZ;REV__ENST00000440317.1_1_2:127315208-127315727:-|nuORF;REV__ENST00000480304.5_1_8:101936173-101961117:-|nuORF;REV__ENST00000517727.5_1_8:101936341-101962760:-|nuORF 13.50788311687929 0.2720325786695375 6 E 1 -1 5.8914 0.0 0.0 0.61598 0.0 0.0 756.3000134254036 68.05125604801015 824.3512694734137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2396518287104437 0.0 E 0.61598 - 24 + 1 1.541 55904.3 1.0 1850 5267 7117 SUDHL4_400M_050219_2,7119 SUDHL4_400M_050219_2,7119,TVSKMCAAM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7120 36.885 208.0 251010.0 25 0 20966.0 + 39899 VFPASPSVSL 10 80 502.2750566217484 1002.5355603102968 2 502.2751037478447 MULTI CID FTMS 0 0 0 7117 160652.65625 0.9307967633765196 -2 0.0687332153320312 3 Unmodified _VFPASPSVSL_ ENSG00000183655|ENST00000337975|KLHL25 43.85829265575387 0.1168243637355526 6 TVS{I|L} 4 7 40.165 0.0 0.0 4.0063 0.0 0.0 584.2897816388687 0.0 584.2897816388687 0.0 24.680475292681265 0.0 0.0 0 0.5 0.0 0.9247425010840048 0.0 TVS{I|L} 4.0063 - 70 1 1.541 46681.6 1.0 1851 5267 7117 SUDHL4_400M_050219_2,7120 SUDHL4_400M_050219_2,7120,VFPASPSVSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7121 36.89 272.0 217820.0 25 0 17902.0 + 42672 VTVRPGLAM 9 97 480.2706292272797 958.5267055213592 2 480.2708618044853 MULTI CID FTMS 0 0 0 7117 161135.1875 0.4785856220101311 -4 0.1316566467285156 4 Oxidation (M) _VTVRPGLAM(Oxidation (M))_ ENSG00000099974|ENST00000215770|DDTL;ENSG00000099977|ENST00000398344|DDT;ENST00000444947.2_1_22:24315904-24316657:-|nuORF;nc|ENSG00000099977|P30046-2|DDT 49.55428908609986 0.0413471690215031 6 {[TV]|[{I|L}S]}VR[PG]{I|L}A{M(Oxidation (M))|F} 9 0 + 51.053 0.0 0.0 5.3262 5.3262 90.918 0.0 0.0 0.0 3.8541526910186974 20.084099879420947 3.8541526910186974 51.05320000950151 0 2.167735320183944 1.6989700043360187 0.3054621874040891 0.0 + + {[TV]|[{I|L}S]}VR[PG]{I|L}A{M(Oxidation (M))|F} 5.3262 + + 113 1 1.541 50304.8 1.0 1852 5267 7117 SUDHL4_400M_050219_2,7121 SUDHL4_400M_050219_2,7121,VTVRPGLAM True False VTVRPGLAM 36.890416 480.270861804485 4107665.25 7117.0 ENSG00000099977|ENST00000398344|DDT;;ENSG00000099974|ENST00000215770|DDTL;;nc|ENSG00000099977|P30046-2|DDT;;ENST00000444947.2_1_22:24315904-24316657:-|nuORF 7.107043902079265 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7122 36.904 800.0 174300.0 25 0 20573.0 + 34451 SLYKDAMQY 9 136 567.7629353724716 1133.511317811743 2 567.7626220583916 MULTI CID FTMS 0 0 0 7117 145536.265625 0.8276225730409061 -1 0.0549163818359375 5 Oxidation (M) _SLYKDAM(Oxidation (M))QY_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 45.69961567697781 0.0497987121815769 6 {[TV]|[{I|L}S]}[WM]NEQ{[QV]|[N{I|L}]|[RA]|[KV]} 9 6 + 36.4 0.0 0.0 3.2112 3.2112 70.838 0.0 0.0 0.0 6.235943883786248 7.337192696679587 6.235943883786248 1.2493873660830062 0 0.7134679910804405 2.0 1.16944517631652 0.0 {[TV]|[{I|L}S]}[WM]NEQ{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}[WM]NEGA{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}TQQY;{NN|[MP]|[D{I|L}]|[EV]}Q[NP]EQQY;{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}T]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[CA]|SS}[KA];{[TV]|[{I|L}S]}[WM]GGEQ{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{[ES]|[DT]|[{I|L}C]}{[QS]|[NT]}TQ{[QV]|[N{I|L}]|[RA]|[KV]};{[TV]|[{I|L}S]}[WM]GGEGA{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}{[ES]|[DT]|[{I|L}C]}{[QS]|[NT]}TGA{[QV]|[N{I|L}]|[RA]|[KV]};{NN|[MP]|[D{I|L}]|[EV]}Q[HM]EY[KA] 3.2112;3.101;2.5279;2.4653;2.4047;2.3989;2.3861;2.2925;2.2797;2.2262 -;-;-;-;-;-;-;-;-;- 1607 1 1.541 106359.0 0.6000000238418579 1853 5267 7117 SUDHL4_400M_050219_2,7122 SUDHL4_400M_050219_2,7122,SLYKDAMQY True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7123 36.907 145.0 276570.0 25 0 39289.0 + + -1 AAGRPLEL 8 79 413.2395813335268 824.4646097338535 2 413.7417480349541 MULTI CID FTMS 0 0 0 7117 245937.109375 1.0 0 0.0 6 Acetyl (Protein N-term) _(Acetyl (Protein N-term))DIGGPLVL_ ENSG00000120802|ENST00000556029|TMPO;nc|ENSG00000120802|P42167-2|TMPO 2.889219685676258 0.8067950007271085 6 {I|L} 1 -1 13.099 0.0 0.0 1.5888 0.0 0.0 693.3698659367817 0.0 693.3698659367817 0.0 8.287953282225473 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5888 + + 9 + 1 1.541 36700.3 1.0 1854 5267 7117 SUDHL4_400M_050219_2,7123 SUDHL4_400M_050219_2,7123,DIGGPLVL False False AAGRPLEL 36.907139 413.741748034954 1469069.75 7117.0 ENSG00000120802|ENST00000556029|TMPO;;nc|ENSG00000120802|P42167-2|TMPO 1.9319624702135725 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7124 36.912 243.0 231980.0 25 0 29215.0 -1 0 76 471.2008949585981 470.19361849199805 1 471.2000610232353 MULTI CID FTMS 0 0 0 7117 170109.453125 0.8438458113736133 1 -0.0395088195800781 7 6 {M(Oxidation (M))|F} 1 -1 13.979 0.0 0.0 2.9731 0.0 0.0 305.1477485962933 0.0 305.1477485962933 0.0 3.701813447471221 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.9731 - 18 + 1 1.541 50661.2 1.0 1855 5267 7117 SUDHL4_400M_050219_2,7124 SUDHL4_400M_050219_2,7124, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7126 36.921 315.0 196550.0 25 0 18520.0 -1 MAYNKLNVF 9 87 558.2809923254387 1114.5474317176772 2 558.2807494997978 MULTI CID FTMS 0 0 0 7125 153186.125 1.0 0 0.0 1 Oxidation (M) _M(Oxidation (M))AYNKLNVF_ ENSG00000213614|ENST00000268097|HEXA;ENST00000563762.5_1_15:72640446-72647950:-|nuORF;ENST00000566672.5_1_15:72638574-72647950:-|nuORF;ENST00000568777.5_1_15:72638642-72646100:-|nuORF;nc|ENSG00000213614|P06865-2|HEXA 12.531546534597751 0.4974689918368763 6 DPY{[CP]|[EA]} 5 -1 29.961 0.0 0.0 2.6882 0.0 0.0 521.3178578107437 0.0 521.3178578107437 0.0 16.46591250700361 0.0 0.0 0 0.9247425010840048 0.0 0.3494850021680094 0.0 DPY{[CP]|[EA]} 2.6882 - 37 1 1.541 50863.7 1.0 1856 5268 7125 SUDHL4_400M_050219_2,7126 SUDHL4_400M_050219_2,7126,MAYNKLNVF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7127 36.925 163.0 359590.0 25 0 69887.0 + 17339 KLWEAESKL 9 81 552.3085257701146 1102.602498607029 2 552.3085815310478 MULTI CID FTMS 0 0 0 7125 354776.03125 0.6779290452889299 -3 0.1082420349121093 2 Unmodified _KLWEAESKL_ ENSG00000159055|ENST00000290130|MIS18A 94.90867108109512 0.0129882248954091 6 {I|L}KWEAESK{I|L} 9 2 + 83.594 0.0 0.0 7.5815 7.5815 89.557 0.0 0.0 0.0 35.96800612362415 13.170112459003846 13.170112459003846 6.817496819840642 0 2.778659694992122 0.0 1.7104093769761874 0.0 {I|L}KWEAESK{I|L};K{I|L}WEAESK{I|L};[K{I|L}]WEAESK{I|L};[WE]A[K{I|L}]ESK{I|L};[WE][K{I|L}]AESK{I|L};[K{I|L}]WEATDK{I|L};[WE]AE[K{I|L}]SK{I|L};[K{I|L}]WETADK{I|L};[K{I|L}]WTEADK{I|L};[K{I|L}]S{M(Oxidation (M))|F}AE[PA]K{I|L} 7.5815;6.9632;6.9573;5.7745;5.727;5.6125;5.2295;5.1834;4.6848;4.4396 -;+;+;-;-;-;-;-;-;- + 581 + 1 1.541 49481.9 1.0 1857 5268 7125 SUDHL4_400M_050219_2,7127 SUDHL4_400M_050219_2,7127,KLWEAESKL True True KLWEAESKL 36.924554 552.308581531048 2671821.25 7125.0 ENSG00000159055|ENST00000290130|MIS18A 6.916071891784668 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7128 36.938 800.0 136640.0 25 0 15804.0 + 38857 TVIPNSHVYY 10 120 596.8030125559292 1191.5914721786585 2 596.8038207888603 MULTI CID FTMS 0 0 0 7125 127563.4765625 1.0 0 0.0 3 Unmodified _TVIPNSHVYY_ ENSG00000117133|ENST00000370654|RPF1 41.8396318013385 0.1381409678234242 6 {[TV]|[{I|L}S]}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}VH 8 6 47.172 0.0 0.0 3.9587 0.0 0.0 0.0 295.1053255670532 295.1053255670532 20.25744017593446 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.3807196863200844 {[TV]|[{I|L}S]}{I|L}{[QC]|[C(Carbamidomethyl (C))A]}{I|L}VH 3.9587 - 649 + 1 1.541 85255.2 0.5699999928474426 1858 5268 7125 SUDHL4_400M_050219_2,7128 SUDHL4_400M_050219_2,7128,TVIPNSHVYY False True TVIPNSHVYY 36.938387 596.80382078886 1313894.125 7125.0 ENSG00000117133|ENST00000370654|RPF1 4.72201943397522 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7130 36.955 800.0 94922.0 25 0 12011.0 30199 QVVLAEAI 8 128 421.7511925075163 841.4878320818326 2 421.7513915896416 MULTI CID FTMS 0 0 0 7129 126963.3671875 0.7815065268564092 -21 0.7320480346679688 1 Unmodified _QVVLAEAI_ ENSG00000077782|ENST00000447712|FGFR1;ENST00000526570.5_1_8:38271148-38285795:-|nuORF;nc|ENSG00000077782|P11362-10|FGFR1;nc|ENSG00000077782|P11362-11|FGFR1;nc|ENSG00000077782|P11362-12|FGFR1;nc|ENSG00000077782|P11362-13|FGFR1;nc|ENSG00000077782|P11362-14|FGFR1;nc|ENSG00000077782|P11362-19|FGFR1;nc|ENSG00000077782|P11362-2|FGFR1;nc|ENSG00000077782|P11362-20|FGFR1;nc|ENSG00000077782|P11362-21|FGFR1;nc|ENSG00000077782|P11362-3|FGFR1;nc|ENSG00000077782|P11362-4|FGFR1;nc|ENSG00000077782|P11362-5|FGFR1;nc|ENSG00000077782|P11362-6|FGFR1;nc|ENSG00000077782|P11362-7|FGFR1;nc|ENSG00000077782|P11362-8|FGFR1;nc|ENSG00000077782|P11362-9|FGFR1 2.302733041254933 0.8103549651115762 6 V 1 7 9.2694 0.0 0.0 1.1015 0.0 0.0 724.4084920323194 0.0 724.4084920323194 0.0 0.6401490679272079 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1015 + + 14 + 1 1.541 62780.2 0.4699999988079071 1859 5269 7129 SUDHL4_400M_050219_2,7130 SUDHL4_400M_050219_2,7130,QVVLAEAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7131 36.965 595.0 231960.0 25 0 16729.0 + 31063 RLIGIYKTY 9 102 563.8344923267347 1125.6544317202693 2 563.8342773318291 MULTI CID FTMS 0 0 0 7129 135464.3125 0.3696873400154412 -4 0.1349105834960937 2 Unmodified _RLIGIYKTY_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 81.89019881105858 0.0170587746866453 6 [R{I|L}]{I|L}G{I|L}YKTY 9 0 + 69.223 0.0 0.0 6.1496 6.1496 87.268 0.0 0.0 0.0 8.600840614449794 41.77616592881115 8.600840614449794 8.927900303521312 0 1.3807196863200843 0.0 0.3807196863200844 1.079689690656103 + + [R{I|L}]{I|L}G{I|L}YKTY;[{I|L}A][RV]{I|L}YKTY;[{I|L}V]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}YKTY 6.1496;5.3565;5.0187 +;-;- + 199 1 1.541 108185.9 1.0 1860 5269 7129 SUDHL4_400M_050219_2,7131 SUDHL4_400M_050219_2,7131,RLIGIYKTY True True RLIGIYKTY 36.96517 563.834277331829 1684758.75 7129.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 4.154632973174254 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7132 36.979 800.0 126800.0 25 0 9103.8 -1 0 115 881.9108697492725 1761.8071865653449 2 882.4147216677666 MULTI CID FTMS 0 0 0 7129 104655.0234375 0.615508600036942 -5 0.1825675964355468 3 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ[YK]EPAQ 15 -1 + 82.067 0.0 0.0 4.6581 4.6581 81.992 0.0 0.0 0.0 7.617608341954735 10.326385825694928 7.617608341954735 8.565473235138114 0 1.0629529932484498 0.0 0.2742275032520141 1.1307196863200843 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ[YK]EPAQ;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAQ[YK]EPAQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[AG][YK]EPAQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEAQ[YK]EPAQ;{[NV]|[RG]}E{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}EV{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}VE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[KG]EE[YK]QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.6581;4.1719;4.1455;4.1455;4.1455;4.072;4.072;3.8975;3.8165;3.8029 -;-;-;-;-;-;-;-;-;- 2902 + 1 1.541 70958.9 0.4699999988079071 1861 5269 7129 SUDHL4_400M_050219_2,7132 SUDHL4_400M_050219_2,7132, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7134 36.985 120.0 387840.0 25 0 66588.0 + 40369 VHVSLEWT 8 74 485.7531849384226 969.4918169436452 2 485.7534667849541 MULTI CID FTMS 0 0 0 7133 343890.78125 0.8901289600488432 -1 0.0406379699707031 1 Unmodified _VHVSLEWT_ REV__ENSG00000073712|ENST00000341590|FERMT2;REV__nc|ENSG00000073712|Q96AC1-2|FERMT2;REV__nc|ENSG00000073712|Q96AC1-3|FERMT2 15.768221252438446 0.6779680726941459 6 [HV]VS{[DA]|[EG]}VP{M(Oxidation (M))|F} 9 -1 + 52.43 0.0 0.0 5.408 5.408 89.99 0.0 0.0 0.0 22.63219278023279 21.795357909850125 21.795357909850125 22.135380403309743 0 0.6069758080123702 1.6989700043360187 0.9247425010840048 0.0 [HV]VS{[DA]|[EG]}VP{M(Oxidation (M))|F};[HV]WWVP{M(Oxidation (M))|F};[HV]VWWP{M(Oxidation (M))|F};[HV][PA][TP]SYV;[YV]S[RP]SYV;[PA]HV[TP]SYV;[YV]V{[CT]|[{M(Oxidation (M))|F}G]}V{[WT]|[RM]};[YV]V[R{M(Oxidation (M))|F}]{[WT]|[RM]};[YV]V{[CT]|[{M(Oxidation (M))|F}G]}{[WT]|[RM]}V;[YV][R{M(Oxidation (M))|F}]V{[WT]|[RM]} 5.408;3.1248;3.1248;2.3465;2.1164;1.7299;1.6363;1.2856;1.0543;0.97514 -;-;-;-;-;-;-;-;-;- 170 1 1.541 40519.8 1.0 1862 5270 7133 SUDHL4_400M_050219_2,7134 SUDHL4_400M_050219_2,7134,VHVSLEWT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7135 36.998 713.0 146920.0 25 0 13952.0 + 17078 KLDVDAPRL 9 122 513.800571207858 1025.5865894825158 2 513.8008300662041 MULTI CID FTMS 0 0 0 7133 118624.171875 0.9626686853432288 -1 0.0406379699707031 2 Unmodified _KLDVDAPRL_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 38.61474834105838 0.0830609365873449 6 {I|L}KDVDVD{I|L}G 9 6 69.836 0.0 0.0 6.8094 0.0 0.0 0.0 68.05123315982655 68.05123315982655 58.72662850085504 0.0 0.0 0.0 0 0.5 0.744727494896694 0.3054621874040891 0.0 {I|L}KDVDVD{I|L}G 6.8094 - 579 + 1 1.541 82384.6 1.0 1863 5270 7133 SUDHL4_400M_050219_2,7135 SUDHL4_400M_050219_2,7135,KLDVDAPRL True True KLDVDAPRL 36.997768 513.800830066204 591300.0 7133.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 7.378804683685303 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7136 37.003 263.0 266900.0 25 0 27221.0 + 31067 RLIQESPTL 9 94 528.8061503207156 1055.597747708231 2 528.8062011599541 MULTI CID FTMS 0 0 0 7133 204341.203125 0.5635003624147898 -3 0.1068153381347656 3 Unmodified _RLIQESPTL_ ENSG00000111684|ENST00000261407|LPCAT3;ENST00000535479.5_1_12:7086310-7087113:-|nuORF;nc|ENSG00000111684|Q6P1A2-2|LPCAT3 62.57269311338072 0.0246576765497938 6 [TP]{I|L}[KA]E{[RE]|[WV]}{I|L} 9 7 + 53.111 0.0 0.0 5.0314 5.0314 86.027 0.0 0.0 0.0 0.4033763900979039 21.0947790971728 0.4033763900979039 9.542425094393243 0 0.805462187404089 1.5228787452803376 0.6694451763165201 0.0 [TP]{I|L}[KA]E{[RE]|[WV]}{I|L};[TP]{I|L}S[Q{I|L}]{[RE]|[WV]}{I|L};[TP]{I|L}[KA]W{NN|[MP]|[D{I|L}]|[EV]}{I|L};[{I|L}T]P[KA]E{[RE]|[WV]}{I|L};[RV][RV]EG{NN|[MP]|[D{I|L}]|[EV]}{I|L};[{I|L}T]PS[Q{I|L}]{[RE]|[WV]}{I|L};[{I|L}T]P[KA]W{NN|[MP]|[D{I|L}]|[EV]}{I|L};[RV][RV]W{NN|[MP]|[D{I|L}]|[EV]}{I|L} 5.0314;4.1274;4.1004;2.5781;2.0827;1.6741;1.647;1.1084 -;-;-;-;-;-;-;- 582 1 1.541 60699.8 1.0 1864 5270 7133 SUDHL4_400M_050219_2,7136 SUDHL4_400M_050219_2,7136,RLIQESPTL True True RLIQESPTL 37.002651 528.806201159954 1799271.5 7133.0 nc|ENSG00000111684|Q6P1A2-2|LPCAT3;;ENSG00000111684|ENST00000261407|LPCAT3;;ENST00000535479.5_1_12:7086310-7087113:-|nuORF 5.365765889485677 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7137 37.015 703.0 168250.0 25 0 17159.0 + 13736 HRAAIKSS 8 156 435.25087341894266 868.4871939046853 2 435.2514221072197 MULTI CID FTMS 0 0 0 7133 95139.5390625 0.6803717493552932 -1 0.0406379699707031 4 Unmodified _HRAAIKSS_ REV__ENSG00000144040|ENST00000272433|SFXN5;REV__ENST00000474528.5_1_2:73172153-73286292:-|nuORF 2.302733041254933 0.8103549651115762 6 P 1 -1 8.5835 0.0 0.0 0.98833 0.0 0.0 753.423219455758 0.0 753.423219455758 0.0 1.3100206260532667 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.98833 - 19 + 1 1.541 96702.8 1.0 1865 5270 7133 SUDHL4_400M_050219_2,7137 SUDHL4_400M_050219_2,7137,HRAAIKSS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7139 37.031 800.0 129880.0 25 0 8809.5 -1 AMNPTNTVF 9 131 505.7341941059091 1009.4538352786184 2 505.7342712283134 MULTI CID FTMS 0 0 0 7138 63113.82421875 0.115089751425941 7 -0.2954902648925781 1 Oxidation (M) _AM(Oxidation (M))NPTNTVF_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000443628.2_1_X:114011085-114011187:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 18.1463463914782 0.3454829746528889 6 [TP]NN{[MS]|[{M(Oxidation (M))|F}A]}{I|L}S{M(Oxidation (M))|F} 9 -1 [TP]NN{[MS]|[{M(Oxidation (M))|F}A]}{I|L} + + 17.959 -12.28 -1.6215 1.7791 1.7791 50.187 0.0 0.0 0.0 0.0 -4.232712163289278 -4.232712163289278 0.0 0 0.0 0.0 0.0 0.0 [TP]NN{[MS]|[{M(Oxidation (M))|F}A]}{I|L}S{M(Oxidation (M))|F} 1.7791 - 227 + 1 1.541 83230.0 0.5199999809265137 1866 5271 7138 SUDHL4_400M_050219_2,7139 SUDHL4_400M_050219_2,7139,AMNPTNTVF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7140 37.045 800.0 145880.0 25 0 15493.0 + 38840 TVIDEVRTGTY 11 95 627.3213283927355 1252.628103852271 2 627.3223144412041 MULTI CID FTMS 0 0 0 7138 97212.2265625 0.6129826959195884 -5 0.1975517272949218 2 Unmodified _TVIDEVRTGTY_ ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000167552|Q71U36-2|TUBA1A 44.391923383255 0.1486875248750151 6 {[TV]|[{I|L}S]}{I|L}DEV[WK]TY 10 3 + 67.005 0.0 0.0 5.3491 5.3491 89.882 0.0 0.0 0.0 52.40085961185265 3.187587626244124 3.187587626244124 22.959474036817333 0 0.9916440611282626 2.0 0.8494850021680094 0.0 {[TV]|[{I|L}S]}{I|L}DEV[WK]TY;{[TV]|[{I|L}S]}{I|L}K{[QG]|[NA]}[MN]Y{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}D{I|L}VV[MN]Y{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}DVV[MN]Y{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}Q[KG][MN]Y{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}QN[C(Carbamidomethyl (C))R]Y{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}S{I|L}VV[MN]Y{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}[AG]N[C(Carbamidomethyl (C))R]Y{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}QGG[C(Carbamidomethyl (C))R]Y{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}QN[HN]{NN|[MP]|[D{I|L}]|[EV]}{[TV]|[{I|L}S]} 5.3491;3.5162;3.175;3.1149;2.8029;2.6374;2.1862;1.9058;1.9058;1.9058 -;-;-;-;-;-;-;-;-;- 324 + 1 1.541 93734.5 0.5199999809265137 1867 5271 7138 SUDHL4_400M_050219_2,7140 SUDHL4_400M_050219_2,7140,TVIDEVRTGTY False True TVIDEVRTGTY 37.045042 627.322314441204 847321.8125 7138.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;;ENSG00000167553|ENST00000301072|TUBA1C;;ENSG00000167552|ENST00000301071|TUBA1A;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000123416|P68363-2|TUBA1B 5.540962219238281 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7141 37.059 800.0 85508.0 25 0 6928.2 -1 0 75 865.8973861736318 1729.7802194140636 2 866.3978759646416 MULTI CID FTMS 0 0 0 7138 97246.859375 0.2650851255693934 -8 0.2742919921875 3 6 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 46.86 0.0 0.0 2.709 0.0 0.0 844.4169097999625 0.0 844.4169097999625 0.0 27.791681396006 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 2.709 - 256 1 1.541 56124.2 0.4699999988079071 1868 5271 7138 SUDHL4_400M_050219_2,7141 SUDHL4_400M_050219_2,7141, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7143 37.064 80.0 428200.0 25 0 35620.0 + 44142 YLDPAQQNL 9 68 531.2662176372421 1060.517882341284 2 531.2667114138603 MULTI CID FTMS 0 0 0 7142 343156.5625 0.4308924279857804 4 -0.1652755737304687 1 Unmodified _YLDPAQQNL_ ENST00000421406.1_1_1:247353282-247372753:-|nuORF 28.486842064014134 0.1687311288560894 6 [Y{I|L}]DP{I|L}{I|L}ST 8 5 36.643 0.0 0.0 3.4552 0.0 0.0 0.0 155.03329917161537 155.03329917161537 20.15807108110504 0.0 0.0 0.0 0 0.0 2.0 0.4247425010840047 0.0 [Y{I|L}]DP{I|L}{I|L}ST 3.4552 - 177 1 1.541 33998.9 1.0 1869 5272 7142 SUDHL4_400M_050219_2,7143 SUDHL4_400M_050219_2,7143,YLDPAQQNL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7144 37.07 341.0 199850.0 25 0 26515.0 + 41084 VNHYEALLL 9 111 536.2972078809644 0 536.3010742068291 PEAK CID FTMS 0 0 0 7142 117881.5 0.2396164975373648 7 -0.2703666687011719 2 Unmodified _VNHYEALLL_ REV__ENST00000391785.7_1_19:53087386-53087446:+|nuORF 21.74664581756881 0.185237546287679 6 AT 2 -1 22.206 0.0 0.0 2.0742 0.0 0.0 244.1723935969398 651.2992647760374 895.4716583729771 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.8494850021680094 0.0 AT 2.0742 - 185 + 1 1.541 57750.3 1.0 1870 5272 7142 SUDHL4_400M_050219_2,7144 SUDHL4_400M_050219_2,7144,VNHYEALLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7145 37.071 66.0 755150.0 25 0 114520.0 + -1 RMLDSVEKL 9 62 553.7972527885564 1105.5799526439127 2 553.7971069216728 MULTI CID FTMS 0 0 0 7142 617742.25 0.5393643802437801 -3 0.1204986572265625 3 Oxidation (M) _RM(Oxidation (M))LDSVEKL_ nc|ENSG00000123338|P55160-2|NCKAP1L;ENSG00000123338|ENST00000293373|NCKAP1L 32.037481411007896 0.1235546156350648 6 EDSVE{I|L}K 7 -1 36.392 0.0 0.0 3.2916 0.0 0.0 287.186655380044 0.0 287.186655380044 0.0 25.282373670646912 0.0 0.0 0 1.742992819099939 0.0 0.3807196863200844 0.3807196863200844 EDSVE{I|L}K 3.2916 - 165 + 1 1.541 44369.3 1.0 1871 5272 7142 SUDHL4_400M_050219_2,7145 SUDHL4_400M_050219_2,7145,RMLDSVEKL False False RMLDSVEKL 37.071448 553.797106921673 10783128.0 7142.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 4.125317891438802 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7146 37.074 115.0 591340.0 25 0 243080.0 -1 0 65 398.2300484747443 794.4455440162886 2 398.2297851443291 MULTI CID FTMS 0 0 0 7142 424339.96875 0.7915715157630756 -5 0.186676025390625 4 6 {M(Oxidation (M))|F} 1 -1 1.5938 0.0 0.0 0.20062 0.0 0.0 397.248475764321 247.09763513736564 644.3461109016866 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.20062 - 1 + 1 1.541 59745.6 1.0 1872 5272 7142 SUDHL4_400M_050219_2,7146 SUDHL4_400M_050219_2,7146, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7148 37.084 346.0 243740.0 25 0 35865.0 28060 PPGANGFV 8 107 379.6951613837627 757.3757698343254 2 379.6945983767509 MULTI CID FTMS 0 0 0 7147 177816.171875 0.3827812730046626 -2 0.0589981079101562 1 Unmodified _PPGANGFV_ ENST00000403150.5_1_7:1577170-1577704:+|nuORF 2.889219685676258 0.8067950007271085 6 {[{M(Oxidation (M))|F}D]|MM}{I|L}HQV 6 7 + 30.425 0.0 0.0 4.0172 4.0172 84.1 0.0 0.0 0.0 6.478174818886373 13.547971438769087 6.478174818886373 13.547971438769087 0 0.2742275032520141 0.0 0.0 0.9436726795685344 {[{M(Oxidation (M))|F}D]|MM}{I|L}HQV;[H{I|L}]D{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[H{I|L}]QV{[{M(Oxidation (M))|F}D]|MM};[H{I|L}]AR{[{M(Oxidation (M))|F}D]|MM};{[{M(Oxidation (M))|F}D]|MM}{I|L}H[AG]V;[H{I|L}]AGV{[{M(Oxidation (M))|F}D]|MM};[H{I|L}]AVG{[{M(Oxidation (M))|F}D]|MM};{NN|[MP]|[D{I|L}]|[EV]}H{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HQ]{I|L}V{[{M(Oxidation (M))|F}D]|MM} 4.0172;2.2284;1.7367;1.7367;1.5274;1.4553;1.3787;0.45916;0.055847 -;-;-;-;-;-;-;-;- 78 + 1 1.541 71666.3 1.0 1873 5273 7147 SUDHL4_400M_050219_2,7148 SUDHL4_400M_050219_2,7148,PPGANGFV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7149 37.098 800.0 166550.0 25 0 9944.2 + 13110 HERPEFIAY 9 107 581.2877520683426 0 581.2880737185478 PEAK CID FTMS 0 0 0 7147 130914.5625 0.7695560968293235 -2 0.0589981079101562 2 Unmodified _HERPEFIAY_ ENSG00000111775|ENST00000229379|COX6A1;ENST00000550009.1_1_12:120875908-120876378:+|nuORF 36.39500950444726 0.0794399782185705 6 A{I|L}{M(Oxidation (M))|F}[EP]R 6 7 33.817 0.0 0.0 2.9139 0.0 0.0 181.07322067028585 263.07859216861567 444.1518128389015 0.0 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.0 0.7302046884880937 A{I|L}{M(Oxidation (M))|F}[EP]R 2.9139 - 269 + 1 1.541 100935.0 0.5899999737739563 1874 5273 7147 SUDHL4_400M_050219_2,7149 SUDHL4_400M_050219_2,7149,HERPEFIAY True True HERPEFIAY 37.097807 581.288073718548 899451.4375 7147.0 ENST00000550009.1_1_12:120875908-120876378:+|nuORF;;ENSG00000111775|ENST00000229379|COX6A1 8.30936861038208 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7150 37.109 647.0 219330.0 25 0 13201.0 + -1 LLSAEPVP 8 127 825.3622651896269 1648.7099774460537 2 825.3629638552666 MULTI CID FTMS 0 0 0 7147 129516.6328125 1.0 0 0.0 3 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))ENWYQRM(Oxidation (M))DFFR_ ENSG00000007312|ENST00000006750|CD79B;nc|ENSG00000007312|P40259-2|CD79B;ENST00000558969.1_1_17:62008689-62009627:-|nuORF 0.2690200627634905 0.8738786812967896 6 {NN|[MP]|[D{I|L}]|[EV]}[TA]{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SDA{M(Oxidation (M))|F}YVQ 14 -1 + 72.422 0.0 0.0 4.3926 4.3926 78.776 0.0 0.0 0.0 2.63676291853443 48.91214837285874 2.63676291853443 5.123465760009978 0 0.6655852772434645 0.0 2.2104093769761874 1.1989700043360187 {NN|[MP]|[D{I|L}]|[EV]}[TA]{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SDA{M(Oxidation (M))|F}YVQ;[VP]{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SW{M(Oxidation (M))|F}YVQ;[VP][DP]C[HM]QDA{M(Oxidation (M))|F}YVQ;{[QN]|[E{I|L}]|[KN]}{[SA]|[TG]}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SDA{M(Oxidation (M))|F}YVQ;{[SA]|[TG]}E{I|L}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SDA{M(Oxidation (M))|F}YVQ;{NN|[MP]|[D{I|L}]|[EV]}[TA]{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SW{M(Oxidation (M))|F}YVQ;[VP][DP]C[HM]GADA{M(Oxidation (M))|F}YVQ;{I|L}{I|L}{[SA]|[TG]}E[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]SDA{M(Oxidation (M))|F}YVQ;[YQ][YG][HM]GADA{M(Oxidation (M))|F}YVQ;[VP][DP]C[HM]QW{M(Oxidation (M))|F}YVQ 4.3926;4.0819;3.9811;3.9687;3.9068;3.7306;3.4771;3.3771;3.3556;3.319 -;-;-;-;-;-;-;-;-;- 2130 1 1.541 101791.7 1.0 1875 5273 7147 SUDHL4_400M_050219_2,7150 SUDHL4_400M_050219_2,7150,ENWYQRMDFFR False False LLSAEPVP 37.109098 825.362963855267 3878701.25 7147.0 ENSG00000007312|ENST00000006750|CD79B;;nc|ENSG00000007312|P40259-2|CD79B;;ENST00000558969.1_1_17:62008689-62009627:-|nuORF 0.6832836071650187 1.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7151 37.123 800.0 88002.0 25 0 8150.6 + 17095 KLFEDGKTGF 10 111 571.2979770666151 1140.58140120003 2 571.2980224490166 MULTI CID FTMS 0 0 0 7147 98756.1484375 1.0 0 0.0 4 Unmodified _KLFEDGKTGF_ ENSG00000278053|ENST00000617633|DDX52 53.31671820480216 0.0606844387689228 6 K{I|L}{M(Oxidation (M))|F}EDGKTG{M(Oxidation (M))|F} 10 0 + 69.474 0.0 0.0 6.0911 6.0911 90.882 0.0 0.0 0.0 52.02684409496328 13.037275116073346 13.037275116073346 13.521825181113629 0 1.4604093769761874 0.0 0.8494850021680094 0.0 + + K{I|L}{M(Oxidation (M))|F}EDGKTG{M(Oxidation (M))|F};K{I|L}{M(Oxidation (M))|F}EDGKAAY;K{I|L}{M(Oxidation (M))|F}DDAKTG{M(Oxidation (M))|F};K{I|L}{M(Oxidation (M))|F}DD{M(Oxidation (M))|F}[KT]Q;K[WH]H[KT]TG{M(Oxidation (M))|F};[WH]KH[KT]TG{M(Oxidation (M))|F};[WH]KH[KT]AAY;[WH]K[WQ][KT]Q;[WH][{M(Oxidation (M))|F}V][NS]RVP 6.0911;4.9056;4.3622;2.623;1.9789;1.5405;0.35498;0.22538;0.21614 +;-;-;-;-;-;-;-;- + 399 + 1 1.541 57394.4 0.5099999904632568 1876 5273 7147 SUDHL4_400M_050219_2,7151 SUDHL4_400M_050219_2,7151,KLFEDGKTGF True True KLFEDGKTGF 37.12293 571.298022449017 418113.90625 7147.0 ENSG00000278053|ENST00000617633|DDX52 6.944845040639241 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7153 37.139 800.0 98957.0 25 0 5924.5 + + -1 RMAVLNEQV 9 126 538.2824277254066 1074.550302517613 2 538.2817870974541 MULTI CID FTMS 0 0 0 7152 85560.8515625 0.7585169793127684 1 -0.0356369018554687 1 Carbamidomethyl (C) _GC(Carbamidomethyl (C))KKINENI_ nc|ENSG00000132780|P49321-2|NASP;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;ENSG00000132780|ENST00000350030|NASP;nc|ENSG00000132780|P49321-4|NASP;nc|ENSG00000132780|P49321-3|NASP;ENST00000529239.1_1_8:61850552-61850903:-|nuORF 29.081581746732265 0.1611639662936252 6 [NP]YN{I|L}VEQV 9 -1 + 39.663 0.0 0.0 3.6911 3.6911 74.578 0.0 0.0 0.0 3.0102999566398125 3.802112417116064 3.0102999566398125 3.0102999566398125 0 0.5 0.0 0.3807196863200844 0.8494850021680094 [NP]YN{I|L}VEQV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}TN{I|L}VEQV;[NP]YN{I|L}VEN{I|L};{[WS]|[C(Carbamidomethyl (C)){I|L}]}TN{I|L}VEN{I|L};[AG]V[{M(Oxidation (M))|F}V]{I|L}NE{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}V]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}NE{[QV]|[N{I|L}]|[RA]|[KV]};[NP]YGG{I|L}VEQV;{[WS]|[C(Carbamidomethyl (C)){I|L}]}TGG{I|L}VEQV;{[YD]|[{M(Oxidation (M))|F}M]}[{I|L}P]{I|L}VEQV;[NP]YGG{I|L}VEN{I|L} 3.6911;3.411;3.3373;3.0572;3.0325;2.8562;2.8342;2.5541;2.5278;2.4804 -;-;-;-;-;-;-;-;-;- 343 + 1 1.541 66031.1 0.5400000214576721 1877 5274 7152 SUDHL4_400M_050219_2,7153 SUDHL4_400M_050219_2,7153,GCKKINENI False False RMAVLNEQV 37.139313 538.281787097454 369650.65625 7152.0 nc|ENSG00000132780|P49321-2|NASP;;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;;ENSG00000132780|ENST00000350030|NASP;;nc|ENSG00000132780|P49321-4|NASP;;nc|ENSG00000132780|P49321-3|NASP;;ENST00000529239.1_1_8:61850552-61850903:-|nuORF 7.627752780914307 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7154 37.142 139.0 350120.0 25 0 21516.0 + 31587 RQPYAVSEL 9 81 531.7835528865954 1061.5525528399908 2 531.7839843630791 MULTI CID FTMS 0 0 0 7152 303320.0 1.0 0 0.0 2 Unmodified _RQPYAVSEL_ ENSG00000174444|ENST00000307961|RPL4;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;ENST00000567229.5_1_15:66795359-66797161:-|nuORF 34.40172386719151 0.1061884637610825 6 {[ES]|[DT]|[{I|L}C]}{I|L}[KS]AVSE{I|L} 10 5 + 48.659 0.0 0.0 4.5837 4.5837 80.017 0.0 0.0 0.0 3.802112417116064 32.4607625286837 3.802112417116064 6.262874945799766 0 0.5 0.0 0.8252574989159953 0.0 {[ES]|[DT]|[{I|L}C]}{I|L}[KS]AVSE{I|L};{[QN]|[E{I|L}]|[KN]}S[KS]AVSE{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}[KS]AVDT{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVSE{I|L};{[QN]|[E{I|L}]|[KN]}S[KS]AVDT{I|L};{NN|[MP]|[D{I|L}]|[EV]}T[KS]AVSE{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AVDT{I|L};[PA]Q[YR]VSE{I|L};{NN|[MP]|[D{I|L}]|[EV]}T[KS]AVDT{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}[KS]A[PA]{M(Oxidation (M))|F}{I|L} 4.5837;3.9938;3.9468;3.871;3.3569;3.3353;3.2341;2.909;2.6984;2.4425 -;-;-;+;-;-;-;-;-;- + 239 1 1.541 44668.9 1.0 1878 5274 7152 SUDHL4_400M_050219_2,7154 SUDHL4_400M_050219_2,7154,RQPYAVSEL True True RQPYAVSEL 37.142123 531.783984363079 1719112.875 7152.0 ENST00000566622.5_1_15:66794044-66797161:-|nuORF;;ENST00000564439.5_1_15:66793756-66797161:-|nuORF;;ENSG00000174444|ENST00000307961|RPL4;;ENST00000561554.5_1_15:66795666-66797161:-|nuORF;;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;;ENST00000566624.5_1_15:66794944-66797161:-|nuORF;;ENST00000561775.5_1_15:66795189-66797161:-|nuORF;;ENST00000567229.5_1_15:66795359-66797161:-|nuORF 6.765834490458171 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7155 37.15 446.0 160480.0 25 0 24747.0 + 1421 ALDNDNYNL 9 97 526.2376459811218 1050.4607390290437 2 526.2380248904228 MULTI CID FTMS 0 0 0 7152 130029.265625 0.3637025519791848 -2 0.0640487670898437 3 Unmodified _ALDNDNYNL_ ENSG00000162688|ENST00000361915|AGL;nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL 56.17704186161178 0.0281986971544335 6 [{I|L}A]DNDNYN{I|L} 9 0 + 50.244 0.0 0.0 4.783 4.783 77.548 0.0 0.0 0.0 2.901929735929976 9.335295873671754 2.901929735929976 2.901929735929976 0 0.6435078169319297 1.6989700043360187 0.25 0.9247425010840048 + + [{I|L}A]DNDNYN{I|L};{NN|[MP]|[D{I|L}]|[EV]}ANDNYN{I|L};[DN]DN{I|L}AYN{I|L};[{I|L}A]DNDGGYN{I|L};[{I|L}A]DGGDNYN{I|L};{NN|[MP]|[D{I|L}]|[EV]}ANDGGYN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AGGDNYN{I|L};[{I|L}A]G[DG]DNYN{I|L};[DN]DNY[{I|L}A]N{I|L};[DN]DGG{I|L}AYN{I|L} 4.783;4.5068;4.2148;3.9065;3.9065;3.6302;3.6302;3.6199;3.4328;3.3382 +;-;-;-;-;-;-;-;-;- + 332 1 1.541 63627.4 1.0 1879 5274 7152 SUDHL4_400M_050219_2,7155 SUDHL4_400M_050219_2,7155,ALDNDNYNL True True ALDNDNYNL 37.150046 526.238024890423 1894029.625 7152.0 nc|ENSG00000162688|P35573-2|AGL;;ENSG00000162688|ENST00000361915|AGL;;nc|ENSG00000162688|P35573-3|AGL 6.320931275685628 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7156 37.159 482.0 213430.0 25 0 20716.0 + 33647 SISKALVAY 9 123 476.2795654680134 950.5445780028268 2 476.2793762087822 MULTI CID FTMS 0 0 0 7152 133102.0625 0.3973361946469405 -2 0.0640487670898437 4 Unmodified _SISKALVAY_ ENSG00000105193|ENST00000251453|RPS16;ENST00000339471.8_1_19:39923915-39924228:-|nuORF 38.17557092003332 0.0854718145212029 6 {[TV]|[{I|L}S]}[KA]VTVAY 9 3 + 59.16 0.0 0.0 6.2238 6.2238 80.414 0.0 0.0 0.0 14.523080096621255 14.09256854528806 14.09256854528806 1.3438587683064966 0 1.2215141619232908 2.0 0.6643943297944485 0.0 {[TV]|[{I|L}S]}[KA]VTVAY;{[TV]|[{I|L}S]}[KA]S{I|L}VAY;{[TV]|[{I|L}S]}[KA]VS{I|L}AY;{[TV]|[{I|L}S]}[KA]VATVY;{[TV]|[{I|L}S]}[KA]SV{I|L}AY;{[TV]|[{I|L}S]}[KA]VTAVY;{[TV]|[{I|L}S]}[KA]S{I|L}AVY;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}KTVAY;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}KS{I|L}AY;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}KATVY 6.2238;6.0824;6.0385;5.9593;5.8971;5.6427;5.5013;5.4884;5.3032;5.224 -;-;-;-;-;-;-;-;-;- 753 1 1.541 81951.8 1.0 1880 5274 7152 SUDHL4_400M_050219_2,7156 SUDHL4_400M_050219_2,7156,SISKALVAY True True SISKALVAY 37.158567 476.279376208782 1733498.625 7152.0 ENST00000339471.8_1_19:39923915-39924228:-|nuORF;;ENSG00000105193|ENST00000251453|RPS16 2.748581012090048 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7158 37.172 540.0 192080.0 25 0 11960.0 + 42673 VTVRPGLAM 9 119 480.2706292272797 958.5267055213592 2 480.2701904177666 MULTI CID FTMS 0 0 0 7157 117345.3046875 0.3485258341467815 4 -0.1706809997558593 1 Oxidation (M) _VTVRPGLAM(Oxidation (M))_ ENSG00000099974|ENST00000215770|DDTL;ENSG00000099977|ENST00000398344|DDT;ENST00000444947.2_1_22:24315904-24316657:-|nuORF;nc|ENSG00000099977|P30046-2|DDT 45.69961567697781 0.0497987121815769 6 VTVR 4 5 42.186 0.0 0.0 4.4011 0.0 0.0 0.0 500.2169415777017 500.2169415777017 11.216459608685485 0.0 0.0 0.0 0 0.7059771852360797 1.6989700043360187 0.0 0.0 + VTVR 4.4011 + + 196 + 1 1.541 82163.3 1.0 1881 5275 7157 SUDHL4_400M_050219_2,7158 SUDHL4_400M_050219_2,7158,VTVRPGLAM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7159 37.176 209.0 399400.0 25 0 60567.0 + 9391 FISEFEHRV 9 88 388.5330535680924 1162.5773313044772 3 388.5328246951103 MULTI CID FTMS 0 0 0 7157 271657.0625 0.8658970269928372 -1 0.0356369018554687 2 Unmodified _FISEFEHRV_ ENSG00000185627|ENST00000532097|PSMD13;ENST00000527047.5_1_11:237024-247462:+|nuORF 39.94969957227396 0.0757326808254658 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EH[RV] 9 0 + 50.85 0.0 0.0 4.3739 4.3739 76.638 0.0 0.0 0.0 7.147642715192504 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.3252574989159953 0.0 0.9247425010840048 0.4247425010840047 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EH[RV];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SE{M(Oxidation (M))|F}EV[RH];[{M(Oxidation (M))|F}T][YK]{M(Oxidation (M))|F}ES{[QN]|[E{I|L}]|[KN]};{[MG]|[TS]}[KA]{[CP]|[EA]}VES{[QN]|[E{I|L}]|[KN]};{[MG]|[TS]}[QA]{[TV]|[{I|L}S]}VES{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}[C(Carbamidomethyl (C))R]ES{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[{M(Oxidation (M))|F}T][RV];[{M(Oxidation (M))|F}E][{M(Oxidation (M))|F}V][RH]S{[QN]|[E{I|L}]|[KN]} 4.3739;4.115;2.4188;1.8998;1.6408;1.5173;0.67646;0.1827 +;-;-;-;-;-;-;- + 175 + 1 1.541 71087.2 1.0 1882 5275 7157 SUDHL4_400M_050219_2,7159 SUDHL4_400M_050219_2,7159,FISEFEHRV True True FISEFEHRV 37.175883 388.53282469511 1577774.5 7157.0 ENST00000527047.5_1_11:237024-247462:+|nuORF;;ENSG00000185627|ENST00000532097|PSMD13 6.876964728037517 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7160 37.181 271.0 225020.0 25 0 31815.0 + 10937 GAKRHSGL 8 103 413.2395813335268 824.4646097338535 2 413.2382690310478 MULTI CID FTMS 0 0 0 7157 223436.453125 0.7248338044606177 -10 0.3550949096679687 3 Unmodified _GAKRHSGL_ REV__ENSG00000080823|ENST00000361847|MOK;REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF;REV__ENST00000521766.5_1_14:102695648-102699035:-|nuORF;REV__nc|ENSG00000080823|Q9UQ07-5|MOK;REV__nc|ENSG00000080823|Q9UQ07-6|MOK 5.230669730166228 0.792582437072536 6 {I|L} 1 -1 8.8224 0.0 0.0 1.0701 0.0 0.0 693.3698659367817 0.0 693.3698659367817 0.0 2.255539111773727 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0701 + + 6 + 1 1.541 52780.4 1.0 1883 5275 7157 SUDHL4_400M_050219_2,7160 SUDHL4_400M_050219_2,7160,GAKRHSGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7161 37.195 800.0 138470.0 25 0 26233.0 + 9485 FLDESRSTQYM 11 88 696.8077820146206 1391.601011096041 2 696.8085815310478 MULTI CID FTMS 0 0 0 7157 150192.765625 1.0 0 0.0 4 Oxidation (M) _FLDESRSTQYM(Oxidation (M))_ ENSG00000183207|ENST00000595090|RUVBL2;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;nc|ENSG00000183207|Q9Y230-2|RUVBL2 72.58957779350692 0.0248999445157541 6 DWWSTQY{M(Oxidation (M))|F} 8 5 51.117 0.0 0.0 3.6732 0.0 0.0 260.15247626947314 0.0 260.15247626947314 0.0 31.36241654732192 0.0 0.0 0 1.774227503252014 0.0 0.5774509799928715 0.0 DWWSTQY{M(Oxidation (M))|F} 3.6732 - 360 1 1.541 82557.5 0.6100000143051147 1884 5275 7157 SUDHL4_400M_050219_2,7161 SUDHL4_400M_050219_2,7161,FLDESRSTQYM True False FLDESRSTQYM 37.194729 696.808581531048 748763.625 7157.0 ENSG00000183207|ENST00000595090|RUVBL2;;ENST00000596247.5_1_19:49507512-49519096:+|nuORF;;nc|ENSG00000183207|Q9Y230-2|RUVBL2 9.166603724161783 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7162 37.209 800.0 485930.0 25 0 94342.0 + 38208 TPRHIIVRF 9 133 569.8456580345648 1137.6767631359296 2 569.8457519412041 MULTI CID FTMS 0 0 0 7157 123582.015625 0.0920554428904103 -4 0.1437263488769531 5 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 111.30893174071366 0.0049985560726157 6 TPRH{I|L}{I|L}V{M(Oxidation (M))|F}R 9 2 + 87.909 0.0 0.0 7.7271 7.7271 90.412 0.0 0.0 0.0 21.30503253575975 7.781512503836424 7.781512503836424 7.781512503836424 0 2.258582007194973 0.721246399047171 0.0 1.8882104921644447 TPRH{I|L}{I|L}V{M(Oxidation (M))|F}R;TPRH{I|L}{I|L}VR{M(Oxidation (M))|F} 7.7271;7.0431 -;+ + 398 + 1 1.541 292216.9 0.5799999833106995 1885 5275 7157 SUDHL4_400M_050219_2,7162 SUDHL4_400M_050219_2,7162,TPRHIIVRF True True TPRHIIVRF 37.20856 569.845751941204 80994792.0 7157.0 nc|ENSG1000|Q9UN81|L1_ORF1 8.471775690714518 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 7163 37.217 504.0 130370.0 25 0 10732.0 + -1 GMLPDPKNV 9 108 493.7526915280172 985.4908301228344 2 493.7522155642509 MULTI CID FTMS 0 0 0 7157 100361.234375 1.0 0 0.0 6 Oxidation (M) _GM(Oxidation (M))LPDPKNV_ ENSG00000151729|ENST00000281456|SLC25A4;ENST00000491736.1_1_4:186066902-186068122:+|nuORF 14.838274106304384 0.4350285940865338 6 [KP]DP[KC]{I|L}{[DA]|[EG]} 9 -1 + 19.828 0.0 0.0 2.012 2.012 81.318 0.0 0.0 0.0 0.1233373507372448 6.3334872455039495 0.1233373507372448 19.828337267184043 0 0.9247425010840048 0.0 0.0 0.0 [KP]DP[KC]{I|L}{[DA]|[EG]} 2.012 - 173 1 1.541 55970.4 1.0 1886 5275 7157 SUDHL4_400M_050219_2,7163 SUDHL4_400M_050219_2,7163,GMLPDPKNV False False GMLPDPKNV 37.217439 493.752215564251 1021056.0625 7157.0 ENSG00000151729|ENST00000281456|SLC25A4;;ENST00000491736.1_1_4:186066902-186068122:+|nuORF 4.102372964223226 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7164 37.224 375.0 178550.0 25 0 11553.0 + 2175 AQAFIHNSL 9 105 500.7647315970468 999.5149102608935 2 500.7644836306572 MULTI CID FTMS 0 0 0 7157 82342.7265625 0.5965651795179762 -1 0.0356369018554687 7 Unmodified _AQAFIHNSL_ ENSG00000225921|ENST00000451315|NOL7 49.52724829834842 0.0414064571532091 6 [QA]A{M(Oxidation (M))|F}{I|L}HNS{I|L} 9 0 + 60.583 0.0 0.0 6.0612 6.0612 91.207 0.0 0.0 0.0 46.43722806879513 12.351231680853765 12.351231680853765 16.197887582883936 0 0.9247425010840048 1.0 0.4916440611282626 0.6989700043360187 + + [QA]A{M(Oxidation (M))|F}{I|L}HNS{I|L};[QA]A{M(Oxidation (M))|F}{I|L}HGGS{I|L};[QA]A[QA][WK]PT 6.0612;4.4406;2.8733 +;-;- + 206 + 1 1.541 55115.0 1.0 1887 5275 7157 SUDHL4_400M_050219_2,7164 SUDHL4_400M_050219_2,7164,AQAFIHNSL True True AQAFIHNSL 37.224164 500.764483630657 650598.375 7157.0 ENSG00000225921|ENST00000451315|NOL7 7.767522652943929 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7166 37.241 800.0 138610.0 25 0 11363.0 -1 0 88 881.9108697492725 1761.8071865653449 2 881.9128906130791 MULTI CID FTMS 0 0 0 7165 145214.953125 0.7157992437930866 1 -0.0426673889160156 1 6 [NP]{I|L}NET{[HG]|PP}AEN{I|L}NPDQ 16 -1 + 108.51 0.0 0.0 6.1589 6.1589 84.486 0.0 0.0 0.0 4.998774732165998 4.998774732165998 4.998774732165998 4.998774732165998 0 1.424742501084005 1.0457574905606752 0.3807196863200844 1.8494850021680087 [NP]{I|L}NET{[HG]|PP}AEN{I|L}NPDQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQAAAD{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQ{[NV]|[RG]}D{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}NET{[HG]|PP}AEGG{I|L}NPDQ;[NP]{I|L}GGET{[HG]|PP}AEN{I|L}NPDQ;[NP]{I|L}NET{[HG]|PP}AEN{I|L}GGPDQ;[NP]{I|L}[TP][DP]QAEN{I|L}NPDQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[AG]AAAD{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAQAAAD{M(Oxidation (M))|F}{I|L}Q 6.1589;5.8752;5.8361;5.6652;5.6473;5.6473;5.6473;5.5225;5.3635;5.3635 -;-;-;-;-;-;-;-;-;- 2104 1 1.541 76431.5 0.6399999856948853 1888 5276 7165 SUDHL4_400M_050219_2,7166 SUDHL4_400M_050219_2,7166, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7167 37.242 16.0 3912600.0 25 0 361420.0 + 38210 TPRHIIVRF 9 87 380.2328173335859 1137.6766226009577 3 380.2328063845634 MULTI CID FTMS 0 0 0 7165 3211749.0 0.5235684106101312 -3 0.1503181457519531 2 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 22.774965066869 0.2414061210083823 6 TPRH{I|L}{I|L}{M(Oxidation (M))|F}[RV] 9 2 + 74.346 0.0 0.0 6.5349 6.5349 83.6 0.0 0.0 0.0 53.3771376077312 5.642492736872597 5.642492736872597 3.0102999566398125 0 1.274227503252014 1.0 0.0 0.0 TPRH{I|L}{I|L}{M(Oxidation (M))|F}[RV];TPRH{I|L}{M(Oxidation (M))|F}{I|L}[RV];TPRH{M(Oxidation (M))|F}{I|L}{I|L}[RV] 6.5349;6.2703;5.213 -;-;- 163 + 1 1.541 59790.2 1.0 1889 5276 7165 SUDHL4_400M_050219_2,7167 SUDHL4_400M_050219_2,7167,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 7168 37.244 131.0 407660.0 25 0 56196.0 + 11618 GLADPSALTQA 11 86 522.2722647226208 1042.5299765120417 2 522.2722656130791 MULTI CID FTMS 0 0 0 7165 371207.96875 0.8824802851417548 -1 0.0655899047851562 3 Unmodified _GLADPSALTQA_ ENSG00000124535|ENST00000380773|WRNIP1;nc|ENSG00000124535|Q96S55-2|WRNIP1;nc|ENSG00000124535|Q96S55-3|WRNIP1;nc|ENSG00000124535|Q96S55-4|WRNIP1 55.50274090549119 0.0873970505193986 6 {[VA]|[{I|L}G]}PTGEG{I|L} 8 8 47.049 0.0 0.0 4.513 0.0 0.0 0.0 315.13462674081023 315.13462674081023 24.51335651524652 0.0 0.0 0.0 0 0.6237125054200234 2.0 0.0 0.0 {[VA]|[{I|L}G]}PTGEG{I|L} 4.513 - 602 1 1.541 48218.4 1.0 1890 5276 7165 SUDHL4_400M_050219_2,7168 SUDHL4_400M_050219_2,7168,GLADPSALTQA True True GLADPSALTQA 37.244416 522.272265613079 2402995.25 7165.0 ENSG00000124535|ENST00000380773|WRNIP1;;nc|ENSG00000124535|Q96S55-3|WRNIP1;;nc|ENSG00000124535|Q96S55-2|WRNIP1;;nc|ENSG00000124535|Q96S55-4|WRNIP1 6.477911313374837 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7169 37.253 486.0 175470.0 25 0 18882.0 + 9040 FEDYSNAL 8 96 479.7132217579178 957.4118905826356 2 479.7131530642509 MULTI CID FTMS 0 0 0 7165 183903.234375 1.0 0 0.0 4 Unmodified _FEDYSNAL_ ENSG00000174343|ENST00000310169|CHRNA9 14.581692164780916 0.6954967302934248 6 VG[YC(Carbamidomethyl (C))][{M(Oxidation (M))|F}E]A{I|L} 8 5 + 29.869 0.0 0.0 3.1197 3.1197 83.57 0.0 0.0 0.0 14.384083853657437 1.955094722265116 1.955094722265116 29.86863391869772 0 0.1237125054200235 0.721246399047171 0.3494850021680094 0.0 VG[YC(Carbamidomethyl (C))][{M(Oxidation (M))|F}E]A{I|L} 3.1197 - 103 + 1 1.541 69086.8 1.0 1891 5276 7165 SUDHL4_400M_050219_2,7169 SUDHL4_400M_050219_2,7169,FEDYSNAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7170 37.267 800.0 80280.0 25 0 7710.8 + 40876 VLQQHLETL 9 116 540.8060137316976 1079.597474530195 2 540.8058959841728 MULTI CID FTMS 0 0 0 7165 102851.390625 0.8806990909417489 1 -0.0426673889160156 5 Unmodified _VLQQHLETL_ ENSG00000140382|ENST00000336216|HMG20A 52.268347100219714 0.0353964759249114 6 [{I|L}V][H{I|L}]QQ{M(Oxidation (M))|F}E 8 6 37.445 0.0 0.0 3.4684 0.0 0.0 0.0 82.0668200128539 82.0668200128539 9.414543788274797 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.5 0.3494850021680094 [{I|L}V][H{I|L}]QQ{M(Oxidation (M))|F}E 3.4684 - 849 + 1 1.541 58022.0 0.5099999904632568 1892 5276 7165 SUDHL4_400M_050219_2,7170 SUDHL4_400M_050219_2,7170,VLQQHLETL True True VLQQHLETL 37.266829 540.805895984173 578410.75 7165.0 ENSG00000140382|ENST00000336216|HMG20A 6.080686569213867 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7172 37.282 621.0 212400.0 25 0 21684.0 + 14088 IAPPVPLKA 9 114 453.2945246915641 904.574496449928 2 453.2942687869072 MULTI CID FTMS 0 0 0 7171 143939.015625 0.3969130468839336 -4 0.1929855346679687 1 Unmodified _IAPPVPLKA_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 26.88365393820708 0.1891292719743517 6 [{I|L}A]PPV[{I|L}P]KA 9 0 + 46.717 0.0 0.0 5.1645 5.1645 90.147 0.0 0.0 0.0 23.81956963289862 7.776626710406688 7.776626710406688 46.716789325810765 0 0.4247425010840047 1.6989700043360187 0.0 0.6050541008457975 + + [{I|L}A]PPV[{I|L}P]KA 5.1645 + + 141 + 1 1.541 105658.3 1.0 1893 5277 7171 SUDHL4_400M_050219_2,7172 SUDHL4_400M_050219_2,7172,IAPPVPLKA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7173 37.287 309.0 195600.0 25 0 13737.0 + 15004 ILSEVQQAV 9 106 493.7794000895626 985.5442472459254 2 493.7791931033134 MULTI CID FTMS 0 0 0 7171 125484.0703125 0.1616116469335368 -5 0.2079429626464843 2 Unmodified _ILSEVQQAV_ ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226555150-226558263:-|nuORF 34.10243960390752 0.1078313939113124 6 {[TV]|[{I|L}S]}D{I|L}{I|L}Q 6 6 20.099 0.0 0.0 2.0394 0.0 0.0 0.0 313.15695411531914 313.15695411531914 5.494718957209848 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 {[TV]|[{I|L}S]}D{I|L}{I|L}Q 2.0394 - 524 1 1.541 52849.1 1.0 1894 5277 7171 SUDHL4_400M_050219_2,7173 SUDHL4_400M_050219_2,7173,ILSEVQQAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7174 37.301 800.0 102090.0 25 0 13795.0 40801 VLLNEAAL 8 129 421.7511925075163 841.4878320818326 2 421.7512695193291 MULTI CID FTMS 0 0 0 7171 111660.8359375 0.687313782018144 -13 0.5110092163085938 3 Unmodified _VLLNEAAL_ ENST00000509961.5_1_5:7890412-7890478:+|nuORF 2.577480529830294 0.808687252328423 6 P 1 8 8.7236 0.0 0.0 1.0367 0.0 0.0 726.4242467320264 0.0 726.4242467320264 0.0 0.842569122338749 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.0367 - 19 + 1 1.541 68452.1 0.4600000083446502 1895 5277 7171 SUDHL4_400M_050219_2,7174 SUDHL4_400M_050219_2,7174,VLLNEAAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7175 37.31 528.0 136150.0 25 0 10843.0 + 17072 KLDLSVTEA 9 97 488.2698888677423 974.5252248022846 2 488.2692443728447 MULTI CID FTMS 0 0 0 7171 112106.890625 1.0 0 0.0 4 Unmodified _KLDLSVTEA_ ENSG00000159131|ENST00000381815|GART;ENST00000424203.5_1_21:34876433-34900844:-|nuORF 15.248480904072842 0.4239247793462406 6 {[VA]|[{I|L}G]}A{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}A 9 6 {[VA]|[{I|L}G]}A{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F} + + 13.099 -12.13 -1.3699 1.3441 1.3441 49.994 0.0 0.0 0.0 0.0 -11.833375580519526 -11.833375580519526 0.0 0 0.0 0.0 0.0 0.0 {[VA]|[{I|L}G]}A{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}A 1.3441 - 102 + 1 1.541 59248.2 1.0 1896 5277 7171 SUDHL4_400M_050219_2,7175 SUDHL4_400M_050219_2,7175,KLDLSVTEA False True KLDLSVTEA 37.310339 488.269244372845 441964.59375 7171.0 ENST00000424203.5_1_21:34876433-34900844:-|nuORF;;ENSG00000159131|ENST00000381815|GART 0.2665613691012065 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7177 37.315 122.0 405580.0 25 0 31141.0 -1 0 61 865.8973861736318 1729.7802194140636 2 865.8993408083916 MULTI CID FTMS 0 0 0 7176 420243.8125 1.0 0 0.0 1 6 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 39.654 0.0 0.0 2.2924 0.0 0.0 844.4215496045634 0.0 844.4215496045634 0.0 21.11432819416656 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 DAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.2924 - 112 1 1.541 39353.7 1.0 1897 5278 7176 SUDHL4_400M_050219_2,7177 SUDHL4_400M_050219_2,7177, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7178 37.329 800.0 71652.0 25 0 6410.7 -1 MREMCLFFSR 10 93 725.814781425024 1449.6150099168478 2 726.3178588747978 MULTI CID FTMS 0 0 0 7176 67656.296875 0.6430155895531869 1 -0.0189170837402343 2 Acetyl (Protein N-term),Carbamidomethyl (C),2 Oxidation (M) _(Acetyl (Protein N-term))M(Oxidation (M))REM(Oxidation (M))C(Carbamidomethyl (C))LFFSR_ ENST00000550106.5_1_12:95692693-95693986:+|nuORF 5.731851221503515 0.7001233259664787 6 [HD]EAQQDA{M(Oxidation (M))|F}YQV 12 -1 + 55.928 0.0 0.0 3.8581 3.8581 73.524 0.0 0.0 0.0 3.187587626244124 38.21298266728458 3.187587626244124 1.8406018872695569 0 0.4402794777712158 0.0 0.4247425010840047 0.4247425010840047 [HD]EAQQDA{M(Oxidation (M))|F}YQV;[HD]EAQQW{M(Oxidation (M))|F}YQV;[HD]EA[AG]QDA{M(Oxidation (M))|F}YQV;[HD]EAQ[AG]DA{M(Oxidation (M))|F}YQV;[HD]EAQ[AG]W{M(Oxidation (M))|F}YQV;[HD]EA[AG]QW{M(Oxidation (M))|F}YQV;[{M(Oxidation (M))|F}V]CCQQDA{M(Oxidation (M))|F}YQV;{NN|[MP]|[D{I|L}]|[EV]}Y[WM]DA{M(Oxidation (M))|F}YQV;{NN|[MP]|[D{I|L}]|[EV]}Y[WM]W{M(Oxidation (M))|F}YQV;[{M(Oxidation (M))|F}V]CCQQW{M(Oxidation (M))|F}YQV 3.8581;3.7312;3.2305;3.2305;3.1015;3.1015;2.956;2.853;2.7285;2.536 -;-;-;-;-;-;-;-;-;- 965 1 1.541 46868.5 0.4900000095367431 1898 5278 7176 SUDHL4_400M_050219_2,7178 SUDHL4_400M_050219_2,7178,MREMCLFFSR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7180 37.339 313.0 222520.0 25 0 12469.0 + 34198 SLNSNVYDV 9 109 505.7429343077135 1009.471315682227 2 505.7435180544853 MULTI CID FTMS 0 0 0 7179 206165.6875 0.9366701134132488 -4 0.1706809997558593 1 Unmodified _SLNSNVYDV_ ENSG00000175073|ENST00000310421|VCPIP1 52.268347100219714 0.0353964759249114 6 [VS]NNT 5 6 28.798 0.0 0.0 2.8528 0.0 0.0 0.0 491.21463778599576 491.21463778599576 2.7020447746367147 0.0 0.0 0.0 0 0.0 1.154901959985743 0.6747425010840047 0.3054621874040891 [VS]NNT 2.8528 - 534 1 1.541 58800.0 1.0 1899 5279 7179 SUDHL4_400M_050219_2,7180 SUDHL4_400M_050219_2,7180,SLNSNVYDV True True SLNSNVYDV 37.33883 505.743518054485 1621925.75 7179.0 ENSG00000175073|ENST00000310421|VCPIP1 3.710061470667521 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7181 37.353 800.0 117710.0 25 0 10476.0 + + 30005 RIFGTDSQYNAY 12 96 717.8351994944289 1433.6558460556578 2 717.8359252810478 MULTI CID FTMS 0 0 0 7179 140848.359375 1.0 0 0.0 2 Unmodified _QTHYKLHETDY_ ENSG00000052802|ENST00000261507|MSMO1;nc|ENSG00000052802|Q15800-2|MSMO1 15.248480904072842 0.7179608125786238 6 [R{I|L}]{M(Oxidation (M))|F}GTDSQYNAY 12 -1 + 104.91 0.0 0.0 7.3174 7.3174 84.052 0.0 0.0 0.0 1.9762124636434208 16.611814434466197 1.9762124636434208 1.9762124636434208 0 0.8494850021680094 1.0 1.174742501084005 0.6861818737241735 [R{I|L}]{M(Oxidation (M))|F}GTDSQYNAY;{[QG]|[NA]}Y{I|L}{I|L}DSQYNAY;[R{I|L}]{M(Oxidation (M))|F}GTDSQYGGAY;[R{I|L}]{M(Oxidation (M))|F}GTDS[AG]YNAY;[YN]A{I|L}{I|L}DSQYNAY;{[QG]|[NA]}Y{I|L}{I|L}DSQYGGAY;{[QG]|[NA]}Y{I|L}{I|L}DS[AG]YNAY;[R{I|L}]{M(Oxidation (M))|F}GTDS[AG]YGGAY;[YN]A{I|L}{I|L}DSQYGGAY;[YN]A{I|L}{I|L}DS[AG]YNAY 7.3174;7.1795;6.6828;6.6828;6.6275;6.5449;6.5449;6.0499;5.9929;5.9929 -;-;-;-;-;-;-;-;-;- 745 1 1.541 71965.2 0.5699999928474426 1900 5279 7179 SUDHL4_400M_050219_2,7181 SUDHL4_400M_050219_2,7181,QTHYKLHETDY False False RIFGTDSQYNAY 37.352661 717.835925281048 719806.0625 7179.0 ENSG00000052802|ENST00000261507|MSMO1;;nc|ENSG00000052802|Q15800-2|MSMO1 8.343057791392008 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7182 37.366 800.0 127170.0 25 0 13044.0 -1 LTMWLGEKL 9 120 553.7972527885564 1105.5799526439127 2 553.7983276247978 MULTI CID FTMS 0 0 0 7179 138813.734375 0.1212013324497338 4 -0.1175765991210937 3 Oxidation (M) _LTM(Oxidation (M))WLGEKL_ ENSG00000109182|ENST00000226432|CWH43 36.12702656103203 0.0967173616627612 6 {I|L}KE[HQ]E{I|L}K 8 -1 39.898 0.0 0.0 3.6088 0.0 0.0 82.00972782123297 0.0 82.00972782123297 0.0 11.979993739703808 0.0 0.0 0 1.0 0.0 0.4247425010840047 1.2453248753334392 {I|L}KE[HQ]E{I|L}K 3.6088 - 1518 + 1 1.541 82791.6 0.5899999737739563 1901 5279 7179 SUDHL4_400M_050219_2,7182 SUDHL4_400M_050219_2,7182,LTMWLGEKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7184 37.383 800.0 152580.0 25 0 13701.0 + + 18577 ALASHILTA 9 131 448.7613298273197 0 448.7628051638603 PEAK CID FTMS 0 0 0 7183 106750.9609375 0.9302684178757528 -1 0.0372390747070312 1 Unmodified _LACHRLLA_ nc|ENSG00000160049|O00273-2|DFFA;ENSG00000160049|ENST00000377038|DFFA 14.581692164780916 0.4900557725783909 6 {I|L}A{I|L}[HD]A 6 -1 18.659 0.0 0.0 2.0836 0.0 0.0 190.0886253755395 82.06682764224843 272.1554530177879 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {I|L}A{I|L}[HD]A 2.0836 - 244 + 1 1.541 99728.8 0.8199999928474426 1902 5280 7183 SUDHL4_400M_050219_2,7184 SUDHL4_400M_050219_2,7184,LACHRLLA False False ALASHILTA 37.382853 448.76280516386 590070.125 7183.0 nc|ENSG00000160049|O00273-2|DFFA;;ENSG00000160049|ENST00000377038|DFFA 2.6097191174825034 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7185 37.394 643.0 113410.0 25 0 7826.4 + 30802 RIFSGGDQSF 10 108 557.2693964173382 1112.5242399014762 2 557.2700683474541 MULTI CID FTMS 0 0 0 7183 103678.7890625 0.9330753286093948 -1 0.0372390747070312 2 Unmodified _RIFSGGDQSF_ ENSG00000148634|ENST00000373700|HERC4;ENST00000427635.6_1_10:69747892-69752485:-|nuORF;nc|ENSG00000148634|Q5GLZ8-3|HERC4;nc|ENSG00000148634|Q5GLZ8-6|HERC4;nc|ENSG00000148634|Q5GLZ8|HERC4 35.61225514009592 0.2039006631696762 6 [R{I|L}]{M(Oxidation (M))|F}SNDQS{M(Oxidation (M))|F} 9 2 + 60.411 0.0 0.0 5.4301 5.4301 79.372 0.0 0.0 0.0 2.272437815030628 16.478174818886373 2.272437815030628 2.272437815030628 0 0.5 0.0 0.3807196863200844 0.0 [R{I|L}]{M(Oxidation (M))|F}SNDQS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}]NDQS{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}SGGDQS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}]GGDQS{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}SND[AG]S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}]ND[AG]S{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}SGGD[AG]S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[R{I|L}]GGD[AG]S{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QA][{I|L}A]DQS{M(Oxidation (M))|F};[{I|L}V][YQ]NDQS{M(Oxidation (M))|F} 5.4301;5.2258;5.1595;4.9553;4.6024;4.3982;4.3358;4.1315;3.6987;3.4504 -;-;+;-;-;-;-;-;-;- + 432 1 1.541 60219.0 1.0 1903 5280 7183 SUDHL4_400M_050219_2,7185 SUDHL4_400M_050219_2,7185,RIFSGGDQSF False True RIFSGGDQSF 37.394074 557.270068347454 538329.125 7183.0 ENSG00000148634|ENST00000373700|HERC4;;nc|ENSG00000148634|Q5GLZ8-3|HERC4;;nc|ENSG00000148634|Q5GLZ8|HERC4;;ENST00000427635.6_1_10:69747892-69752485:-|nuORF;;nc|ENSG00000148634|Q5GLZ8-6|HERC4 6.744027296702067 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7186 37.408 800.0 236850.0 25 0 20415.0 23819 LVETYSRLL 9 163 547.3147163552205 1092.614879777241 2 547.3147460818291 MULTI CID FTMS 0 0 0 7183 98884.3203125 0.573986279139098 -2 0.0561561584472656 3 Unmodified _LVETYSRLL_ ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23 28.486842064014134 0.1687311288560894 6 [{I|L}V]{M(Oxidation (M))|F}KSGV[KC]{I|L} 10 7 + 57.018 0.0 0.0 5.2185 5.2185 58.076 0.0 0.0 0.0 17.81205454745895 3.1437180047066 3.1437180047066 0.0 0 0.3807196863200844 2.0 0.5866968715561641 0.0 [{I|L}V]{M(Oxidation (M))|F}KSGV[KC]{I|L};[{I|L}V]{M(Oxidation (M))|F}SKGV[KC]{I|L};[{I|L}V]{M(Oxidation (M))|F}KSG[KP]A{M(Oxidation (M))|F};[{I|L}V]{M(Oxidation (M))|F}SKG[KP]A{M(Oxidation (M))|F};[{I|L}V]{M(Oxidation (M))|F}K{M(Oxidation (M))|F}[RN]G{I|L};[{I|L}V]{M(Oxidation (M))|F}K{M(Oxidation (M))|F}[RN]AV;[{I|L}V]{M(Oxidation (M))|F}K{M(Oxidation (M))|F}[RH]{M(Oxidation (M))|F};[{I|L}V][KS]{M(Oxidation (M))|F}GV[KC]{I|L};[KS]{M(Oxidation (M))|F}VGSSAVV{I|L};[{I|L}V]{M(Oxidation (M))|F}K[QA]{[MS]|[{M(Oxidation (M))|F}A]}G{I|L} 5.2185;5.2185;4.4745;4.4745;3.3715;3.3247;3.1367;3.102;2.9152;2.7902 -;-;-;-;-;-;-;-;-;- 3392 + 1 1.541 145572.5 0.4900000095367431 1904 5280 7183 SUDHL4_400M_050219_2,7186 SUDHL4_400M_050219_2,7186,LVETYSRLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7187 37.411 135.0 502120.0 25 0 185740.0 -1 0 70 398.2300484747443 794.4455440162886 2 398.2298766970634 MULTI CID FTMS 0 0 0 7183 429651.0625 0.8014789268948423 3 -0.0803375244140625 4 6 Q 1 -1 10.181 0.0 0.0 1.2815 0.0 0.0 648.3728949457793 0.0 648.3728949457793 0.0 10.181060863272222 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 1.2815 - 4 + 1 1.541 60257.8 1.0 1905 5280 7183 SUDHL4_400M_050219_2,7187 SUDHL4_400M_050219_2,7187, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7188 37.416 266.0 179660.0 25 0 15796.0 + -1 VAAECGQDTV 10 100 525.2305579184434 1048.4465629036868 2 525.2311279177666 MULTI CID FTMS 0 0 0 7183 164437.75 0.6228286105391863 -2 0.0561561584472656 5 Carbamidomethyl (C) _VAAEC(Carbamidomethyl (C))GQDTV_ REV__ENST00000332598.6_1_5:177022592-177022790:+|nuORF 14.838274106304384 0.5985701837916485 6 CWTV 4 -1 27.625 0.0 0.0 2.6348 0.0 0.0 541.2244692530993 0.0 541.2244692530993 0.0 14.436974992327125 0.0 0.0 0 0.5 0.0 0.2614393726401688 0.0 CWTV 2.6348 - 153 + 1 1.541 44258.1 1.0 1906 5280 7183 SUDHL4_400M_050219_2,7188 SUDHL4_400M_050219_2,7188,VAAECGQDTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7190 37.423 211.0 232750.0 25 0 16655.0 + 30765 RIADISQVY 9 77 532.7897917623691 1063.565030591538 2 532.7907592654228 MULTI CID FTMS 0 0 0 7189 185098.265625 1.0 0 0.0 1 Unmodified _RIADISQVY_ ENSG00000100902|ENST00000261479|PSMA6;ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;ENST00000554843.5_1_14:35761682-35780127:+|nuORF;nc|ENSG00000100902|P60900-2|PSMA6;nc|ENSG00000100902|P60900-3|PSMA6 24.99096001346401 0.2132109383330889 6 D{I|L}SQVY 6 3 47.74 0.0 0.0 4.4887 0.0 0.0 340.22249037910314 0.0 340.22249037910314 0.0 30.750481569446748 0.0 0.0 0 1.0 0.0 0.5 0.0 + D{I|L}SQVY 4.4887 + + 214 1 1.541 49618.2 1.0 1907 5281 7189 SUDHL4_400M_050219_2,7190 SUDHL4_400M_050219_2,7190,RIADISQVY False True RIADISQVY 37.423465 532.790759265423 965434.625 7189.0 ENST00000400275.2_1_Y:15398697-15399255:+|nuORF;;ENST00000554843.5_1_14:35761682-35780127:+|nuORF;;ENSG00000100902|ENST00000261479|PSMA6;;nc|ENSG00000100902|P60900-2|PSMA6;;nc|ENSG00000100902|P60900-3|PSMA6 5.894378503163655 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7191 37.437 800.0 146650.0 25 0 8565.9 28377 PSLPLQPLS 9 127 476.2795654680134 950.5445780028268 2 476.2802612185478 MULTI CID FTMS 0 0 0 7189 55680.0859375 0.166216158100637 5 -0.1382369995117187 2 Unmodified _PSLPLQPLS_ ENST00000442218.2_1_12:48174732-48175212:+|nuORF 20.453626601364224 0.2830276176381075 6 {[TV]|[{I|L}S]}{[VA]|[{I|L}G]}KTVAY 9 7 {[TV]|[{I|L}S]}{[VA]|[{I|L}G]}KTV + + 16.198 3.5658 0.51054 1.7041 1.7041 50.163 0.0 0.0 0.0 0.0 5.601955544287893 0.0 0.0 0 0.0 0.0 0.0 0.0 {[TV]|[{I|L}S]}{[VA]|[{I|L}G]}KTVAY 1.7041 - 188 + 1 1.541 89934.3 0.5400000214576721 1908 5281 7189 SUDHL4_400M_050219_2,7191 SUDHL4_400M_050219_2,7191,PSLPLQPLS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7193 37.442 111.0 406720.0 25 0 39111.0 + 33786 SLCGSVDSITL 11 65 547.7732614004915 1093.531969867783 2 547.7737304568291 MULTI CID FTMS 0 0 0 7192 309940.28125 0.337744161672232 -4 0.1269378662109375 1 Unmodified _SLCGSVDSITL_ REV__nc|ENSG00000185499|P15941-13|MUC1 12.240655878213236 0.7805268987462184 6 {M(Oxidation (M))|F}SV 3 -1 14.693 0.0 0.0 1.3436 0.0 0.0 213.06787182266413 544.2597139947874 757.3275858174516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}SV 1.3436 - 24 + 1 1.541 39459.3 1.0 1909 5282 7192 SUDHL4_400M_050219_2,7193 SUDHL4_400M_050219_2,7193,SLCGSVDSITL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7194 37.447 251.0 208780.0 25 0 32440.0 + 2120 APTPLLDV 8 96 413.2395813335268 824.4646097338535 2 413.2387573122978 MULTI CID FTMS 0 0 0 7192 246379.71875 0.7992623691694197 -3 0.1080207824707031 2 Unmodified _APTPLLDV_ REV__ENSG00000115423|ENST00000389394|DNAH6;REV__ENST00000602588.1_2_2:84885442-84924911:+|nuORF;REV__nc|ENSG00000115423|Q9C0G6-4|DNAH6 2.577480529830294 0.808687252328423 6 P 1 -1 8.6292 0.0 0.0 1.0466 0.0 0.0 709.4007649846333 0.0 709.4007649846333 0.0 1.181935804714664 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.0466 + + 5 + 1 1.541 45231.4 1.0 1910 5282 7192 SUDHL4_400M_050219_2,7194 SUDHL4_400M_050219_2,7194,APTPLLDV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7196 37.452 99.0 745000.0 25 0 148620.0 + 38209 TPRHIIVRF 9 51 569.8456580345648 1137.6767631359296 2 569.8458129763603 MULTI CID FTMS 0 0 0 7195 577915.5 0.4304855122865531 4 -0.1287651062011718 1 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 7.945399516374404 0.6373142958196798 6 [TP]R{M(Oxidation (M))|F} 4 5 18.188 0.0 0.0 1.5987 0.0 0.0 0.0 633.3810518854124 633.3810518854124 15.96910013008056 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [TP]R{M(Oxidation (M))|F} 1.5987 - 18 + 1 1.541 59707.0 1.0 1911 5283 7195 SUDHL4_400M_050219_2,7196 SUDHL4_400M_050219_2,7196,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 7197 37.456 234.0 294870.0 25 0 36996.0 + 1874 ALVQDLAKA 9 99 464.7765955201929 927.538638107186 2 464.7767822146416 MULTI CID FTMS 0 0 0 7195 264194.53125 0.6499343894319514 -2 0.0312423706054687 2 Unmodified _ALVQDLAKA_ ENSG00000134057|ENST00000256442|CCNB1;nc|ENSG00000134057|P14635-2|CCNB1 71.92227651296345 0.0203558744033348 6 [{I|L}A]VQD{I|L}A[KA] 9 0 + 82.004 0.0 0.0 8.841 8.841 93.893 0.0 0.0 0.0 51.15787713959719 11.12704280191288 11.12704280191288 9.208187539523747 0 1.1307196863200843 2.0 0.6861818737241735 0.9731975075880328 + + [{I|L}A]VQD{I|L}A[KA];[{I|L}A]V[AG]D{I|L}A[KA];[{I|L}A]VQSK[VS]P;[{I|L}A]VQSK[PS]V 8.841;7.8482;4.8591;4.7244 +;-;-;- + 1035 + 1 1.541 57590.7 1.0 1912 5283 7195 SUDHL4_400M_050219_2,7197 SUDHL4_400M_050219_2,7197,ALVQDLAKA True True ALVQDLAKA 37.456006 464.776782214642 1963525.5 7195.0 ENSG00000134057|ENST00000256442|CCNB1;;nc|ENSG00000134057|P14635-2|CCNB1 6.658101558685303 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7198 37.468 681.0 142990.0 25 0 23891.0 -1 0 109 561.2977643417032 560.2904878751032 1 561.2951537966728 MULTI CID FTMS 0 0 0 7195 108962.1796875 1.0 0 0.0 3 6 [VG]YG 4 -1 20.846 0.0 0.0 3.7205 0.0 0.0 0.0 181.09877954654533 181.09877954654533 2.887050800742585 0.0 0.0 0.0 0 0.0 1.154901959985743 0.0 0.0 [VG]YG 3.7205 - 65 + 1 1.541 76567.7 1.0 1913 5283 7195 SUDHL4_400M_050219_2,7198 SUDHL4_400M_050219_2,7198, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7199 37.482 800.0 111320.0 25 0 14940.0 + 15711 IQVDPNYAY 9 133 541.7613934176338 1081.5082339020676 2 541.7620727419853 MULTI CID FTMS 0 0 0 7195 135230.28125 1.0 0 0.0 4 Unmodified _IQVDPNYAY_ ENSG00000004897|ENST00000066544|CDC27;ENST00000425026.1_1_Y:10028050-10028227:-|nuORF;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 26.268140514670165 0.1969607489560049 6 [Q{I|L}]VDPNYAY 9 0 + 36.169 0.0 0.0 3.3443 3.3443 77.162 0.0 0.0 0.0 6.94037745420005 10.330145895351857 6.94037745420005 6.94037745420005 0 0.6989700043360187 0.0 0.0 0.5356668758921829 + + [Q{I|L}]VDPNYAY;[{I|L}V]QDPNYAY;{I|L}{I|L}NDPNYAY;[Q{I|L}]VDPGGYAY;[{I|L}T]DVC(Carbamidomethyl (C))Q{I|L}AY;[{I|L}T]C(Carbamidomethyl (C))DVQ{I|L}AY;[{I|L}T]DV[HT]YAY;[Q{I|L}]HY[C(Carbamidomethyl (C))K]AY;[Q{I|L}]VYYYAY;[Q{I|L}]H[C(Carbamidomethyl (C))K]YAY 3.3443;2.7026;2.6749;2.4929;2.4083;2.2727;2.2291;2.1472;2.1249;2.0776 +;-;-;-;-;-;-;-;-;- + 1165 1 1.541 71838.0 0.5799999833106995 1914 5283 7195 SUDHL4_400M_050219_2,7199 SUDHL4_400M_050219_2,7199,IQVDPNYAY False True IQVDPNYAY 37.48169 541.762072741985 559664.875 7195.0 ENST00000425026.1_1_Y:10028050-10028227:-|nuORF;;ENSG00000004897|ENST00000066544|CDC27;;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;;nc|ENSG00000004897|P30260-2|CDC27 1.1277213096618652 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7201 37.497 675.0 144780.0 25 0 13456.0 + -1 TIMPKDIQLAR 11 113 434.5795615259485 1300.7168551780455 3 434.5794860720634 MULTI CID FTMS 0 0 0 7200 52846.58984375 0.4485463013628868 1 -0.0571212768554687 1 Oxidation (M) _TIM(Oxidation (M))PKDIQLAR_ ENSG00000275379|ENST00000616365|H3C11;ENSG00000277775|ENST00000618052|H3C7;ENSG00000197409|ENST00000356476|H3C4;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000197153|ENST00000359303|H3C12;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENSG00000278828|ENST00000685041|H3C10;ENSG00000203811|ENST00000369158|H3C14;ENSG00000275714|ENST00000613854|H3C1;ENSG00000132475|ENST00000254810|H3-3B;ENSG00000168148|ENST00000366696|H3-4;ENSG00000203852|ENST00000403683|H3C15;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENSG00000183598|ENST00000331491|H3C13;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;ENSG00000188375|ENST00000340398|H3-5 23.339653216869817 0.5441804662678561 6 [{I|L}T]{M(Oxidation (M))|F}PKD{I|L}Q{I|L}AR 11 -1 + 77.546 0.0 0.0 5.9618 5.9618 87.015 0.0 0.0 0.0 65.32790338759072 9.050023300178395 9.050023300178395 9.128498242810991 0 0.2887254899964357 2.0 0.0 0.25 [{I|L}T]{M(Oxidation (M))|F}PKD{I|L}Q{I|L}AR;[{I|L}T]{M(Oxidation (M))|F}PKD{I|L}[AG]{I|L}AR 5.9618;5.26 +;- + 92 + 1 1.541 84957.5 1.0 1915 5284 7200 SUDHL4_400M_050219_2,7201 SUDHL4_400M_050219_2,7201,TIMPKDIQLAR False False TIMPKDIQLAR 37.4973 434.579486072063 433338.6875 7200.0 ENSG00000275379|ENST00000616365|H3C11;;ENSG00000277775|ENST00000618052|H3C7;;ENSG00000197409|ENST00000356476|H3C4;;ENSG00000163041|ENST00000366815|H3-3A;;ENSG00000197153|ENST00000359303|H3C12;;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;;ENSG00000278828|ENST00000685041|H3C10;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;;ENSG00000188375|ENST00000340398|H3-5 7.858869552612305 3.0 True 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7202 37.511 800.0 262730.0 25 0 45469.0 + 31957 RVDPNGSRYLL 11 94 645.3513741470225 1288.688195360845 2 645.3513671755791 MULTI CID FTMS 0 0 0 7200 117096.7421875 0.5345522796816763 -2 0.0444145202636718 2 Unmodified _RVDPNGSRYLL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 20.580933911654288 0.6070398941446662 6 {I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[NP]{M(Oxidation (M))|F}H 7 9 27.636 0.0 0.0 2.1445 0.0 0.0 0.0 420.2537378412601 420.2537378412601 17.040440595994415 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.805462187404089 {I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[NP]{M(Oxidation (M))|F}H 2.1445 - 179 + 1 1.541 151520.1 0.5600000023841858 1916 5284 7200 SUDHL4_400M_050219_2,7202 SUDHL4_400M_050219_2,7202,RVDPNGSRYLL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7203 37.525 800.0 175670.0 25 0 17535.0 + 8992 FAVGPGHGI 9 142 427.728664054823 853.442775176446 2 427.7292053103447 MULTI CID FTMS 0 0 0 7200 94034.8359375 0.6448512285940433 -2 0.0444145202636718 3 Unmodified _FAVGPGHGI_ ENSG00000162139|ENST00000294064|NEU3;nc|ENSG00000162139|Q9UQ49|NEU3 28.17323086031832 0.1727213568982648 6 [VS][RH]GVAE 8 7 + 41.96 0.0 0.0 4.9166 4.9166 82.739 0.0 0.0 0.0 5.774700851373531 21.320379101078863 5.774700851373531 8.36203122350166 0 0.4247425010840047 0.638272163982407 1.110924374808178 0.0 [VS][RH]GVAE;{M(Oxidation (M))|F}AVG[PG]{I|L}GH;{M(Oxidation (M))|F}AVG[PG]HG{I|L};[VS][RH]RAE;{M(Oxidation (M))|F}AVG[HN]P{I|L};{M(Oxidation (M))|F}AVG[HN]{I|L}P;[{I|L}T][HQ]RAE;{M(Oxidation (M))|F}AV[NP]{I|L}GH;{M(Oxidation (M))|F}AVG[YQ]G{I|L};{M(Oxidation (M))|F}AV[NP]HG{I|L} 4.9166;3.9368;3.8823;3.7194;3.4317;3.2562;3.2016;3.1777;3.1232;3.1232 -;-;+;-;-;-;-;-;-;- + 326 1 1.541 111708.2 0.4199999868869781 1917 5284 7200 SUDHL4_400M_050219_2,7203 SUDHL4_400M_050219_2,7203,FAVGPGHGI False True FAVGPGHGI 37.524952 427.729205310345 789611.5625 7200.0 ENSG00000162139|ENST00000294064|NEU3;;nc|ENSG00000162139|Q9UQ49|NEU3 5.940925280253093 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7204 37.539 800.0 137040.0 25 0 38005.0 -1 0 42 1191.1529490788937 3570.437017836881 3 1191.821948230267 MULTI CID FTMS 0 0 0 7200 138870.6875 0.240084795137127 -4 0.1151962280273437 4 6 YG[WY]{I|L} 5 -1 12.218 0.0 0.0 0.34221 0.0 0.0 1984.6926011411847 900.3946627252561 2885.0872638664414 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YG[WY]{I|L} 0.34221 - 18 + 1 1.541 100454.4 0.4199999868869781 1918 5284 7200 SUDHL4_400M_050219_2,7204 SUDHL4_400M_050219_2,7204, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7206 37.544 52.0 783060.0 25 0 69579.0 + 38211 TPRHIIVRF 9 70 380.2328173335859 1137.6766226009577 3 380.2327758669853 MULTI CID FTMS 0 0 0 7205 843728.875 0.1375418147774387 6 -0.1554336547851562 1 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 10.898955630103616 0.5416613042237204 6 {I|L}{I|L}{M(Oxidation (M))|F}[RV] 5 6 30.713 0.0 0.0 2.6997 0.0 0.0 491.2623902784952 0.0 491.2623902784952 0.0 9.744237387763093 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F}[RV] 2.6997 - 36 + 1 1.541 39489.1 1.0 1919 5285 7205 SUDHL4_400M_050219_2,7206 SUDHL4_400M_050219_2,7206,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 7207 37.546 130.0 246880.0 25 0 24291.0 + 15005 ILSEVQQAV 9 58 493.7794000895626 985.5442472459254 2 493.7795593142509 MULTI CID FTMS 0 0 0 7205 373740.0 0.481341868928229 3 -0.0827484130859375 2 Unmodified _ILSEVQQAV_ ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226555150-226558263:-|nuORF 24.67388899826682 0.2172451872415813 6 [AG]QVA 5 7 20.718 0.0 0.0 2.1022 0.0 0.0 0.0 556.2984030899285 556.2984030899285 -0.4647527714047328 0.0 -0.4647527714047328 0.0 0 0.0 1.3979400086720375 0.0 0.3807196863200844 [AG]QVA 2.1022 - 144 1 1.541 30440.0 1.0 1920 5285 7205 SUDHL4_400M_050219_2,7207 SUDHL4_400M_050219_2,7207,ILSEVQQAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7208 37.55 207.0 363990.0 25 0 53936.0 + 14089 IAPPVPLKA 9 73 453.2945246915641 904.574496449928 2 453.2944824099541 MULTI CID FTMS 0 0 0 7205 337746.71875 0.931339419211854 4 -0.1074562072753906 3 Unmodified _IAPPVPLKA_ ENSG00000169679|ENST00000302759|BUB1;ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1 14.838274106304384 0.4350285940865338 6 [{I|L}A]PPV[{I|L}P]KA 9 0 + 40.868 0.0 0.0 4.518 4.518 87.738 0.0 0.0 0.0 15.162796389566566 3.689032153388396 3.689032153388396 40.86828217823566 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + + [{I|L}A]PPV[{I|L}P]KA 4.518 + + 85 + 1 1.541 62712.4 1.0 1921 5285 7205 SUDHL4_400M_050219_2,7208 SUDHL4_400M_050219_2,7208,IAPPVPLKA False True IAPPVPLKA 37.550181 453.294482409954 6980726.0 7205.0 ENST00000465029.5_1_2:111419157-111435602:-|nuORF;;nc|ENSG00000169679|O43683-2|BUB1;;ENSG00000169679|ENST00000302759|BUB1;;nc|ENSG00000169679|O43683-3|BUB1 5.869925816853841 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7209 37.554 190.0 349140.0 25 0 42996.0 + 31958 RVDPNGSRYLL 11 73 430.5702787568679 1288.6890068708035 3 430.5700866580009 MULTI CID FTMS 0 0 0 7205 223973.1875 0.8331663623679916 -2 0.09197998046875 4 Unmodified _RVDPNGSRYLL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF 32.89776655970281 0.3218023389984559 6 [RV]DP[YR]EE{I|L}{I|L} 10 5 [RV]DP[YR]EE{I|L} + + 15.485 5.586 0.48255 1.2016 1.2016 49.946 0.0 0.0 0.0 0.0 -0.89062518744797 -0.89062518744797 0.0 0 0.0 0.0 0.0 0.0 [RV]DP[YR]EE{I|L}{I|L} 1.2016 - 60 + 1 1.541 63180.8 1.0 1922 5285 7205 SUDHL4_400M_050219_2,7209 SUDHL4_400M_050219_2,7209,RVDPNGSRYLL False True RVDPNGSRYLL 37.553831 430.570086658001 1529697.875 7205.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;;ENST00000545930.5_1_11:61082914-61091715:-|nuORF;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 5.943151632944743 3.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7211 37.567 606.0 115270.0 25 0 16692.0 28087 PPILSTKS 8 109 421.7511925075163 841.4878320818326 2 421.7512390017509 MULTI CID FTMS 0 0 0 7210 159421.84375 0.9813004662212038 -4 0.1165504455566406 1 Unmodified _PPILSTKS_ ENST00000564902.5_1_15:30916943-30922907:+|nuORF 5.230669730166228 0.792582437072536 6 T 1 7 7.7866 0.0 0.0 0.92534 0.0 0.0 319.19829458358885 418.2249544733032 737.423249056892 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + T 0.92534 + + 21 + 1 1.541 57478.1 1.0 1923 5286 7210 SUDHL4_400M_050219_2,7211 SUDHL4_400M_050219_2,7211,PPILSTKS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7212 37.573 306.0 190410.0 25 0 19051.0 + 19921 LIAGQINTY 9 101 496.77430460766215 991.5340562821244 2 496.7739135622978 MULTI CID FTMS 0 0 0 7210 102573.921875 0.8251285506177092 -1 0.0150146484375 2 Unmodified _LIAGQINTY_ ENSG00000147677|ENST00000521861|EIF3H 30.22481116460888 0.1466181017706357 6 [AG]Q{I|L}{I|L}{I|L}NTY 9 4 [AG]Q{I|L}{I|L}{I|L}N + + 19.508 14.607 2.059 1.9675 1.9675 50.367 0.0 0.0 0.0 0.0 0.7643805846648597 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 [AG]Q{I|L}{I|L}{I|L}NTY 1.9675 - 166 + 1 1.541 50342.6 1.0 1924 5286 7210 SUDHL4_400M_050219_2,7212 SUDHL4_400M_050219_2,7212,LIAGQINTY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7213 37.576 155.0 600930.0 25 0 189110.0 -1 0 78 503.3059050207936 502.2986285541936 1 503.3063232302666 MULTI CID FTMS 0 0 0 7210 376332.03125 1.0 0 0.0 3 6 Y 1 -1 12.764 0.0 0.0 2.5412 0.0 0.0 321.2245451575123 0.0 321.2245451575123 0.0 12.764209843288905 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.5412 - 5 + 1 1.541 73728.5 1.0 1925 5286 7210 SUDHL4_400M_050219_2,7213 SUDHL4_400M_050219_2,7213, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7215 37.586 343.0 161250.0 25 0 13208.0 -1 0 60 865.8973861736318 1729.7802194140636 2 866.3999511599541 MULTI CID FTMS 0 0 0 7214 176139.53125 0.4801385881171585 8 -0.2186126708984375 1 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QDAN{I|L}[DP]{[QN]|[E{I|L}]|[KN]} 14 -1 + 52.686 0.0 0.0 3.0458 3.0458 82.691 0.0 0.0 0.0 11.438485051706522 34.82911023915449 11.438485051706522 21.18330314460589 0 1.0 0.0 0.5 0.805462187404089 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QDAN{I|L}[DP]{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[WR]{I|L}QDA[RH]EMQ 3.0458;1.8212 -;- 426 1 1.541 43636.8 1.0 1926 5287 7214 SUDHL4_400M_050219_2,7215 SUDHL4_400M_050219_2,7215, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7216 37.6 800.0 118230.0 25 0 7574.3 -1 YLFYCKNCRFY 11 105 788.854298373677 1575.694043814154 2 789.3567382693291 MULTI CID FTMS 0 0 0 7214 104261.5625 0.1853739916684298 -7 0.2091026306152343 2 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 1.4819007175156935 0.86815623132643 6 {[QG]|[NA]}GAMH[PG]AQQDAT[HA] 16 -1 + 72.321 0.0 0.0 4.5898 4.5898 76.831 0.0 0.0 0.0 4.890976927910032 7.659167939666332 4.890976927910032 2.895906230238125 0 0.2742275032520141 0.721246399047171 0.8494850021680094 1.6861818737241734 {[QG]|[NA]}GAMH[PG]AQQDAT[HA];{[QG]|[NA]}AGMH[PG]AQQDAT[HA];{[QG]|[NA]}QMH[PG]AQQDAT[HA];{[QN]|[E{I|L}]|[KN]}AMH[PG]AQQDAT[HA];{[QG]|[NA]}GAMH[PG]AEQNAT[HA];{[QG]|[NA]}GAMH[QP]QQDAT[HA];{[QG]|[NA]}GAMH[PG]AQENAT[HA];QQGMH[PG]AQQDAT[HA];{[QG]|[NA]}GAEEHQVQNAT[HA];{[QG]|[NA]}AGMH[PG]AEQNAT[HA] 4.5898;4.406;4.3081;4.2794;4.149;4.1486;4.1462;4.0956;4.0118;3.9652 -;-;-;-;-;-;-;-;-;- 5176 1 1.541 68398.4 0.4799999892711639 1927 5287 7214 SUDHL4_400M_050219_2,7216 SUDHL4_400M_050219_2,7216,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7217 37.613 800.0 64767.0 25 0 17278.0 -1 0 27 1178.153592802534 3531.438949007802 3 1178.488940417767 MULTI CID FTMS 0 0 0 7214 117272.1015625 0.8374513094426487 -2 0.0367851257324218 3 6 G 1 -1 6.9897 0.0 0.0 0.19793 0.0 0.0 2147.7565761391697 1323.642111384362 3471.3986875235314 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19793 - 4 + 1 1.541 54553.3 0.4000000059604645 1928 5287 7214 SUDHL4_400M_050219_2,7217 SUDHL4_400M_050219_2,7217, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7218 37.622 460.0 208610.0 25 0 28766.0 + 25819 NLAENISRV 9 103 508.2798765713172 1014.5452002094344 2 508.2789184451103 MULTI CID FTMS 0 0 0 7214 106569.8515625 0.1988219156598479 -4 0.1287651062011718 4 Unmodified _NLAENISRV_ ENSG00000068976|ENST00000164139|PYGM;ENSG00000100504|ENST00000216392|PYGL;ENSG00000100994|ENST00000216962|PYGB;nc|ENSG00000068976|P11217-2|PYGM;nc|ENSG00000100504|P06737-2|PYGL 36.506200033944 0.094635877243972 6 {[QV]|[N{I|L}]|[RA]|[KV]}AEN{I|L} 6 3 56.387 0.0 0.0 5.5579 0.0 0.0 0.0 357.189380848457 357.189380848457 45.15031251017078 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3494850021680094 0.0 + {[QV]|[N{I|L}]|[RA]|[KV]}AEN{I|L} 5.5579 + + 251 + 1 1.541 78871.5 1.0 1929 5287 7214 SUDHL4_400M_050219_2,7218 SUDHL4_400M_050219_2,7218,NLAENISRV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7220 37.635 626.0 130300.0 25 0 9043.0 + -1 LGSCGFAIW 9 110 505.7429343077135 1009.471315682227 2 505.7437316775322 MULTI CID FTMS 0 0 0 7219 70959.21875 0.322388173707509 5 -0.0942268371582031 1 Carbamidomethyl (C) _LGSC(Carbamidomethyl (C))GFAIW_ REV__ENSG00000241945|ENST00000291576|PWP2 16.942295170755138 0.3780752226737986 6 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}AGYE 7 -1 43.179 0.0 0.0 4.2774 0.0 0.0 0.0 269.1300448053344 269.1300448053344 23.20570735618212 0.0 0.0 0.0 0 0.75 1.5228787452803376 0.0 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}AGYE 4.2774 - 239 + 1 1.541 65104.9 1.0 1930 5288 7219 SUDHL4_400M_050219_2,7220 SUDHL4_400M_050219_2,7220,LGSCGFAIW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7221 37.639 208.0 445930.0 25 0 23841.0 -1 FYEWECKQRMR 11 93 824.8705113003263 1647.7264696674524 2 824.8708373904228 MULTI CID FTMS 0 0 0 7219 287822.40625 0.4697306021963459 -4 0.1398696899414062 2 Carbamidomethyl (C),Oxidation (M) _FYEWEC(Carbamidomethyl (C))KQRM(Oxidation (M))R_ ENSG00000120658|ENST00000690772|ENOX1;nc|ENSG00000120658|Q8TC92-2|ENOX1 1.4819007175156935 0.86815623132643 6 EAQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 10 -1 61.477 0.0 0.0 3.731 0.0 0.0 451.180955955275 0.0 451.180955955275 0.0 21.64024559008425 0.0 0.0 0 0.75 0.0 0.0 1.274227503252014 EAQQNA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]} 3.731 - 715 1 1.541 68554.5 1.0 1931 5288 7219 SUDHL4_400M_050219_2,7221 SUDHL4_400M_050219_2,7221,FYEWECKQRMR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7222 37.646 406.0 228380.0 25 0 25528.0 + 20833 LLYQGPHNTL 10 123 578.3114466713529 1154.6083404095057 2 578.3125488162041 MULTI CID FTMS 0 0 0 7219 159146.328125 0.4931658905089909 -3 0.0827484130859375 3 Unmodified _LLYQGPHNTL_ ENSG00000115232|ENST00000397033|ITGA4;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000484404.1_1_2:182322441-182339919:+|nuORF;nc|ENSG00000115232|P13612-2|ITGA4 79.59630418116434 0.0173986606250113 6 {I|L}{I|L}YQGP[HN]T{I|L} 10 0 + 87.916 0.0 0.0 7.6144 7.6144 91.604 0.0 0.0 0.0 55.031286633547865 9.784700126913393 9.784700126913393 9.164539485499262 0 0.4247425010840047 2.0 1.3556270500406935 1.674742501084005 + + {I|L}{I|L}YQGP[HN]T{I|L};{I|L}{I|L}Y[AG]GP[HN]T{I|L};{I|L}{I|L}YQG[KA]{[YC]|[HE]}P;{I|L}{I|L}YQ[KQ]{[YC]|[HE]}P;{I|L}[RH]QH[HN]T{I|L} 7.6144;6.8206;6.277;5.7456;2.1184 +;-;-;-;- + 696 + 1 1.541 76274.8 1.0 1932 5288 7219 SUDHL4_400M_050219_2,7222 SUDHL4_400M_050219_2,7222,LLYQGPHNTL True True LLYQGPHNTL 37.646266 578.312548816204 1766528.625 7219.0 ENST00000484404.1_1_2:182322441-182339919:+|nuORF;;ENST00000465522.5_1_2:182322141-182350724:+|nuORF;;ENST00000476089.1_1_2:182321937-182323202:+|nuORF;;nc|ENSG00000115232|P13612-2|ITGA4;;ENSG00000115232|ENST00000397033|ITGA4 7.074155171712239 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7224 37.658 455.0 242690.0 25 0 26784.0 14615 IIGWGLPAL 9 111 470.2847625692641 938.554972205328 2 470.2859985232353 MULTI CID FTMS 0 0 0 7223 159501.203125 0.6561908971427242 -2 0.0706710815429687 1 Unmodified _IIGWGLPAL_ ENSG00000112414|ENST00000367609|ADGRG6;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6 36.46614268402704 0.0948557732959553 6 AD{I|L}T{I|L}GPA{I|L} 9 5 36.833 0.0 0.0 3.9244 0.0 0.0 69.05855757881015 0.0 69.05855757881015 0.0 23.33790013641491 0.0 0.0 0 1.4731975075880328 0.0 0.9247425010840048 0.0 AD{I|L}T{I|L}GPA{I|L} 3.9244 - 522 1 1.541 86751.8 1.0 1933 5289 7223 SUDHL4_400M_050219_2,7224 SUDHL4_400M_050219_2,7224,IIGWGLPAL True False RLSPVSPAL 37.658197 470.285998523235 1163448.25 7223.0 ENSG00000168806|ENST00000305641|LCMT2;;ENST00000567039.1_1_15:43620629-43622752:-|nuORF 3.6793372631073 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7226 37.669 459.0 211330.0 25 0 52990.0 -1 0 104 398.2300484747443 794.4455440162886 2 398.2294189333916 MULTI CID FTMS 0 0 0 7225 93938.734375 0.1752350281240946 13 -0.3416557312011719 1 6 D 1 -1 3.0989 0.0 0.0 0.39008 0.0 0.0 397.2535051877513 279.14548669986567 676.398991887617 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.39008 - 9 + 1 1.541 80134.3 1.0 1934 5290 7225 SUDHL4_400M_050219_2,7226 SUDHL4_400M_050219_2,7226, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7227 37.683 800.0 159590.0 25 0 12052.0 + 1748 ALQPEPIKV 9 121 497.8002792590945 993.586005584989 2 497.8002197146416 MULTI CID FTMS 0 0 0 7225 106396.6328125 0.1082993026484928 -8 0.220916748046875 2 Unmodified _ALQPEPIKV_ ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF 36.12702656103203 0.0967173616627612 6 [{I|L}A]Q 3 6 30.942 0.0 0.0 3.1142 0.0 0.0 0.0 678.3828443086356 678.3828443086356 6.538970978223382 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + [{I|L}A]Q 3.1142 + + 353 1 1.541 98925.3 0.5 1935 5290 7225 SUDHL4_400M_050219_2,7227 SUDHL4_400M_050219_2,7227,ALQPEPIKV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7228 37.694 665.0 138300.0 25 0 10817.0 + -1 RTMVDKLLSSR 11 107 441.2467878041101 1320.7185340125304 3 441.2467834353447 MULTI CID FTMS 0 0 0 7225 89178.296875 0.7981643960405953 -1 0.0119247436523437 3 Oxidation (M) _RTM(Oxidation (M))VDKLLSSR_ ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENSG00000166851|ENST00000300093|PLK1 31.544477303781296 0.3515286661033918 6 DK{I|L}{I|L}SSR 7 -1 40.649 0.0 0.0 3.0778 0.0 0.0 503.2515673150679 0.0 503.2515673150679 0.0 16.95980538091078 0.0 0.0 0 1.2302046884880935 0.0 0.0 0.8106509928017439 DK{I|L}{I|L}SSR 3.0778 + + 186 + 1 1.541 79544.5 1.0 1936 5290 7225 SUDHL4_400M_050219_2,7228 SUDHL4_400M_050219_2,7228,RTMVDKLLSSR False False RTMVDKLLSSR 37.694251 441.246783435345 471743.84375 7225.0 ENST00000562272.5_1_16:23691188-23701381:+|nuORF;;ENSG00000166851|ENST00000300093|PLK1 8.221023241678873 3.0 True 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7231 37.704 141.0 341110.0 25 0 43439.0 + 11778 GLIDRQVTV 9 78 500.7933995458834 999.5722461585668 2 500.7931701540947 MULTI CID FTMS 0 0 0 7230 276720.25 0.525224021214309 -3 0.0520401000976562 1 Unmodified _GLLAWLQTV_ ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1 56.17704186161178 0.0281986971544335 6 {[VA]|[{I|L}G]}{I|L}DRVQTV 9 3 + 67.545 0.0 0.0 6.7574 6.7574 85.606 0.0 0.0 0.0 23.071720435366657 4.471580313422194 4.471580313422194 4.471580313422194 0 1.329689690656103 2.0 0.2887254899964357 0.4247425010840047 {[VA]|[{I|L}G]}{I|L}DRVQTV;{[VA]|[{I|L}G]}{I|L}DRVQS{I|L};{[VA]|[{I|L}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QTV;{[VA]|[{I|L}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}QS{I|L};{[VA]|[{I|L}G]}{I|L}DRV[AG]TV;{[VA]|[{I|L}G]}{I|L}DRV[AG]S{I|L};{[VA]|[{I|L}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[AG]TV;{[VA]|[{I|L}G]}{I|L}DRGAVTV;{[VA]|[{I|L}G]}{I|L}DRQVTV;{[VA]|[{I|L}G]}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[AG]S{I|L} 6.7574;6.31;6.284;5.8366;5.4112;4.9639;4.5129;4.4492;4.0969;4.0655 -;-;+;-;-;-;-;-;-;- + 1905 + 1 1.541 41091.7 1.0 1937 5292 7230 SUDHL4_400M_050219_2,7231 SUDHL4_400M_050219_2,7231,GLLAWLQTV True False GLIDRQVTV 37.703682 500.793170154095 2440977.75 7230.0 ENSG00000127603|ENST00000564288|MACF1;;nc|ENSG00000127603|Q9UPN3-5|MACF1;;nc|ENSG00000127603|Q9UPN3|MACF1 5.562817096710205 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7232 37.709 268.0 276390.0 25 0 18231.0 + -1 NQKDGMVSF 9 116 521.2367800265048 1040.4590071198097 2 521.2369872927666 MULTI CID FTMS 0 0 0 7230 327722.84375 0.3180290981920998 -4 0.0767478942871093 2 Oxidation (M) _NQKDGM(Oxidation (M))VSF_ nc|ENSG00000141030|Q9UNS2-2|COPS3;ENSG00000141030|ENST00000268717|COPS3 36.506200033944 0.094635877243972 6 [VS][EC]KNQS{M(Oxidation (M))|F} 9 -1 [VS][EC]K + + 40.028 3.2999 0.6041 3.8472 3.8472 53.704 0.0 0.0 0.0 0.0 27.78811963244225 0.0 0.0 0 0.805462187404089 0.0 0.2742275032520141 0.25 [VS][EC]KNQS{M(Oxidation (M))|F} 3.8472 - 404 + 1 1.541 63003.9 1.0 1938 5292 7230 SUDHL4_400M_050219_2,7232 SUDHL4_400M_050219_2,7232,NQKDGMVSF False False NQKDGMVSF 37.708643 521.236987292767 5019463.0 7230.0 nc|ENSG00000141030|Q9UNS2-2|COPS3;;ENSG00000141030|ENST00000268717|COPS3 6.752650260925293 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7233 37.712 175.0 268740.0 25 0 36735.0 + 42615 VTSSVYYIY 9 65 547.7732614004915 1093.531969867783 2 547.7734252810478 MULTI CID FTMS 0 0 0 7230 246498.421875 0.2686111095787103 6 -0.199371337890625 3 Unmodified _VTSSVYYIY_ REV__ENSG00000138600|ENST00000261854|SPPL2A 16.942295170755138 0.3780752226737986 6 [YT]D 3 -1 20.458 0.0 0.0 1.8708 0.0 0.0 0.0 711.3640230768186 711.3640230768186 6.478174818886373 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [YT]D 1.8708 - 21 + 1 1.541 39608.4 1.0 1939 5292 7230 SUDHL4_400M_050219_2,7233 SUDHL4_400M_050219_2,7233,VTSSVYYIY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7234 37.716 194.0 386050.0 25 0 101230.0 16798 KGLGGTRH 8 89 413.2395813335268 824.4646097338535 2 413.2379943728447 MULTI CID FTMS 0 0 0 7230 178836.5 0.5801503687444522 7 -0.2260475158691406 4 Unmodified _KGLGGTRH_ ENST00000305850.9_1_16:81040200-81040455:+|nuORF 5.230669730166228 0.792582437072536 6 H 1 7 9.2082 0.0 0.0 1.1169 0.0 0.0 669.3980946965473 0.0 669.3980946965473 0.0 6.109243748081781 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 1.1169 + + 7 + 1 1.541 65114.4 1.0 1940 5292 7230 SUDHL4_400M_050219_2,7234 SUDHL4_400M_050219_2,7234,KGLGGTRH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7236 37.722 200.0 244170.0 25 0 28037.0 + 40391 VIDGHIYAV 9 77 493.7675345366043 985.5205161400086 2 493.7676574587822 MULTI CID FTMS 0 0 0 7235 125000.5078125 0.6782443495904735 -1 0.0174789428710937 1 Unmodified _VIDGHIYAV_ ENSG00000079999|ENST00000171111|KEAP1 23.1484247019978 0.2366544122328345 6 [{I|L}V][WK]AQ{[QN]|[E{I|L}]|[KN]} 8 7 + 33.121 0.0 0.0 3.3608 3.3608 80.691 0.0 0.0 0.0 10.374689380265949 18.428637390930263 10.374689380265949 9.262137858390812 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}V][WK]AQ{[QN]|[E{I|L}]|[KN]};[{I|L}V][WK]A[AG]{[QN]|[E{I|L}]|[KN]};[{I|L}V][HT]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E{I|L};{[QN]|[E{I|L}]|[KN]}[RK]AQ{[QN]|[E{I|L}]|[KN]};{[QN]|[E{I|L}]|[KN]}[RK]A[AG]{[QN]|[E{I|L}]|[KN]} 3.3608;2.421;1.7587;1.5113;0.57152 -;-;-;-;- 128 1 1.541 43770.9 1.0 1941 5293 7235 SUDHL4_400M_050219_2,7236 SUDHL4_400M_050219_2,7236,VIDGHIYAV False True VIDGHIYAV 37.722147 493.767657458782 791130.0625 7235.0 ENSG00000079999|ENST00000171111|KEAP1 3.776321371396383 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7237 37.736 800.0 93900.0 25 0 5751.4 -1 0 79 881.911823898127 1761.8090948630538 2 881.9139282107353 MULTI CID FTMS 0 0 0 7235 86886.296875 0.749183684577553 -1 0.0174789428710937 2 6 [NP]{I|L}N[EP]V{I|L}DAN{I|L}NP 14 -1 79.071 0.0 0.0 4.488 0.0 0.0 0.0 258.0578119902913 258.0578119902913 61.87784504746652 0.0 0.0 0.0 0 0.9247425010840048 1.0 0.5 1.274227503252014 [NP]{I|L}N[EP]V{I|L}DAN{I|L}NP 4.488 - 668 1 1.541 54870.9 0.4300000071525574 1942 5293 7235 SUDHL4_400M_050219_2,7237 SUDHL4_400M_050219_2,7237, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7238 37.746 552.0 171410.0 25 0 35151.0 23007 LSHPRHTL 8 89 480.77241674321584 959.5302805532316 2 480.7723876833916 MULTI CID FTMS 0 0 0 7235 156984.796875 1.0 0 0.0 3 Unmodified _LSHPRHTL_ ENSG00000175764|ENST00000321582|TTLL11 18.13498045792455 0.6430038125133779 6 {I|L} 1 7 13.979 0.0 0.0 1.4569 0.0 0.0 828.4354604622146 0.0 828.4354604622146 0.0 1.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4569 + + 93 + 1 1.541 77596.1 1.0 1943 5293 7235 SUDHL4_400M_050219_2,7238 SUDHL4_400M_050219_2,7238,LSHPRHTL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7239 37.752 361.0 209050.0 25 0 50220.0 + + -1 ASSYIAHL 8 67 430.8881689329039 0 430.8880493044853 PEAK CID FTMS 0 0 0 7235 177305.90625 0.7593471833917074 -79 2.294483184814453 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))RLLSHFNLM_ ENSG00000125878|ENST00000246080|TCF15;ENSG00000118526|ENST00000367882|TCF21;ENSG00000178860|ENST00000325509|MSC 5.40270961882225 0.3961065659209837 6 K 1 -1 6.9897 0.0 0.0 0.81298 0.0 0.0 152.3672519700338 576.2709444635374 728.6381964335712 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.81298 - 13 + 1 1.541 65172.3 1.0 1944 5293 7235 SUDHL4_400M_050219_2,7239 SUDHL4_400M_050219_2,7239,CRLLSHFNLM False False ASSYIAHL 37.752176 430.888049304485 157790.0625 7235.0 ENSG00000125878|ENST00000246080|TCF15;;ENSG00000118526|ENST00000367882|TCF21;;ENSG00000178860|ENST00000325509|MSC 2.8805708289146423 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7241 37.77 800.0 109100.0 25 0 17059.0 25962 NLPKELHSKHS 11 84 645.3513741470225 1288.688195360845 2 645.3506347537041 MULTI CID FTMS 0 0 0 7240 45428.60546875 0.2073837765460231 8 -0.2436103820800781 1 Unmodified _NLPKELHSKHS_ nc|ENSG00000144115|Q86YJ6-3|THNSL2 7.608950283845883 0.8392484121837455 6 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S 4 7 16.375 0.0 0.0 1.2707 0.0 0.0 0.0 858.4250782556293 858.4250782556293 -1.8124123737558728 0.0 -1.8124123737558728 0.0 0 0.0 0.9208187539523752 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S 1.2707 - 99 1 1.541 68313.3 0.5199999809265137 1945 5294 7240 SUDHL4_400M_050219_2,7241 SUDHL4_400M_050219_2,7241,NLPKELHSKHS False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 7242 37.774 244.0 248020.0 25 0 33130.0 + 34184 SLNEYQPKL 9 78 546.2906753591249 1090.5667977850496 2 546.2916747927666 MULTI CID FTMS 0 0 0 7240 148099.96875 0.6869196794296849 -2 0.0538597106933593 2 Unmodified _SLNEYQPKL_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1 31.26834338654808 0.1333407332142048 6 {[TV]|[{I|L}S]}NEYQPK{I|L} 9 0 + 64.161 0.0 0.0 5.8832 5.8832 87.304 0.0 0.0 0.0 51.14017719435995 5.238238384176334 5.238238384176334 9.208187539523742 0 0.7614393726401688 2.0 0.0 0.3807196863200844 + + {[TV]|[{I|L}S]}NEYQPK{I|L};{[TV]|[{I|L}S]}GGEYQPK{I|L};{[TV]|[{I|L}S]}NEY[AG]PK{I|L};{[TV]|[{I|L}S]}NEY[KA]A[VP];{[TV]|[{I|L}S]}GGEY[AG]PK{I|L};{[TV]|[{I|L}S]}NEY[KA][PG]{I|L};{[TV]|[{I|L}S]}NEY[KA]{I|L}[PG];{[TV]|[{I|L}S]}GGEY[KA]A[VP];{[TV]|[{I|L}S]}GGEY[KA]{I|L}[PG];[WK]EYRR[PG] 5.8832;5.0389;5.0389;4.523;4.1985;3.933;3.8821;3.6827;3.0417;0.59449 +;-;-;-;-;-;-;-;-;- + 178 + 1 1.541 53731.5 1.0 1946 5294 7240 SUDHL4_400M_050219_2,7242 SUDHL4_400M_050219_2,7242,SLNEYQPKL False True SLNEYQPKL 37.774438 546.291674792767 1176971.0 7240.0 nc|ENSG00000131018|Q8NF91-2|SYNE1;;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;;nc|ENSG00000131018|Q8NF91-4|SYNE1;;ENSG00000131018|ENST00000367255|SYNE1;;nc|ENSG00000131018|Q8NF91-8|SYNE1 6.202367782592773 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7243 37.788 800.0 112450.0 25 0 8742.1 + 34842 SQFTDGQQLY 10 134 593.77232761473 1185.53010229626 2 593.7725707888603 MULTI CID FTMS 0 0 0 7240 105845.234375 0.8781361426382137 -1 0.0363807678222656 3 Unmodified _SQFTDGQQLY_ ENSG00000066136|ENST00000447388|NFYC;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-6|NFYC 59.36838082759317 0.0382430275470746 6 {[QS]|[NT]}{M(Oxidation (M))|F}TDGQQ{I|L}Y 10 0 + 63.08 0.0 0.0 5.3209 5.3209 81.39 0.0 0.0 0.0 4.628881018134415 10.452490459521968 4.628881018134415 4.628881018134415 0 0.8182503180159344 0.8239087409443188 1.4291746928241125 0.6203715150305281 + + {[QS]|[NT]}{M(Oxidation (M))|F}TDGQQ{I|L}Y;[AG]S{M(Oxidation (M))|F}TDGQQ{I|L}Y;{[QS]|[NT]}{M(Oxidation (M))|F}TDG[AG]Q{I|L}Y;{[QS]|[NT]}{M(Oxidation (M))|F}TDGQ[AG]{I|L}Y;{[QS]|[NT]}{M(Oxidation (M))|F}{[DA]|[EG]}QSQ{I|L}Y;[AG]S{M(Oxidation (M))|F}TDG[AG]Q{I|L}Y;[AG]S{M(Oxidation (M))|F}TDGQ[AG]{I|L}Y;{[QS]|[NT]}{[DA]|[EG]}Q{M(Oxidation (M))|F}SQ{I|L}Y;{[QS]|[NT]}{M(Oxidation (M))|F}{[DA]|[EG]}SQQ{I|L}Y;{[QS]|[NT]}{[DA]|[EG]}{M(Oxidation (M))|F}QSQ{I|L}Y 5.3209;4.9304;4.5478;4.5478;4.2218;4.1604;4.1604;3.9237;3.9114;3.8193 +;-;-;-;-;-;-;-;-;- + 1840 1 1.541 68822.6 0.5400000214576721 1947 5294 7240 SUDHL4_400M_050219_2,7243 SUDHL4_400M_050219_2,7243,SQFTDGQQLY True True SQFTDGQQLY 37.788269 593.77257078886 641477.4375 7240.0 nc|ENSG00000066136|Q13952-5|NFYC;;ENSG00000066136|ENST00000447388|NFYC;;nc|ENSG00000066136|Q13952-4|NFYC;;nc|ENSG00000066136|Q13952-6|NFYC 6.5086391766866045 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7244 37.794 327.0 166280.0 25 0 14368.0 + 17302 KLSEGVTISY 10 87 548.7973625921611 1095.580172251122 2 548.7982665896416 MULTI CID FTMS 0 0 0 7240 102648.0078125 0.8130143858173164 -1 0.0363807678222656 4 Unmodified _KLSEGVTISY_ ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-2|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1 34.93206674587334 0.2110832994570416 6 {[TV]|[{I|L}S]}G{[TV]|[{I|L}S]}RT{I|L}SY 10 4 + 64.314 0.0 0.0 5.8703 5.8703 83.444 0.0 0.0 0.0 5.105450102066129 16.53212513775344 5.105450102066129 4.771212547196626 0 1.0 1.0 1.066901560044258 0.0 {[TV]|[{I|L}S]}G{[TV]|[{I|L}S]}RT{I|L}SY;{[TV]|[{I|L}S]}{[RE]|[WV]}KT{I|L}SY;[{I|L}T][RD]KT{I|L}SY;{[TV]|[{I|L}S]}G{[TV]|[{I|L}S]}[VG]T{I|L}SY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[TV]|[{I|L}S]}RT{I|L}SY;{[TV]|[{I|L}S]}G{[TV]|[{I|L}S]}KE{I|L}SY;{[TV]|[{I|L}S]}G{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}G{I|L}SY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[TV]|[{I|L}S]}[VG]T{I|L}SY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[TV]|[{I|L}S]}KE{I|L}SY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}G{I|L}SY 5.8703;5.4348;5.4043;5.0338;4.9993;4.8603;4.2457;4.1589;3.9893;3.3707 -;-;-;-;-;-;-;-;-;- 207 1 1.541 48840.8 1.0 1948 5294 7240 SUDHL4_400M_050219_2,7244 SUDHL4_400M_050219_2,7244,KLSEGVTISY False True KLSEGVTISY 37.794213 548.798266589642 660413.75 7240.0 nc|ENSG00000150093|P05556-2|ITGB1;;nc|ENSG00000150093|P05556-4|ITGB1;;nc|ENSG00000150093|P05556-5|ITGB1;;ENSG00000150093|ENST00000302278|ITGB1;;nc|ENSG00000150093|P05556-3|ITGB1 4.471464474995931 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7246 37.811 800.0 93204.0 25 0 6046.9 -1 RWRCDCRWFRF 11 86 872.9065698314702 1743.7985867297402 2 873.4091674685478 MULTI CID FTMS 0 0 0 7245 102966.4140625 0.6292958172842548 -8 0.2186126708984375 1 2 Carbamidomethyl (C) _RWRC(Carbamidomethyl (C))DC(Carbamidomethyl (C))RWFRF_ ENST00000602980.1_1_7:29725056-29725440:+|nuORF 0.0 0.8751479354844584 6 QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 36.36 0.0 0.0 2.0851 0.0 0.0 716.3610707013687 0.0 716.3610707013687 0.0 15.558481052291675 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 QAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.0851 - 397 1 1.541 59679.4 0.4600000083446502 1949 5295 7245 SUDHL4_400M_050219_2,7246 SUDHL4_400M_050219_2,7246,RWRCDCRWFRF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7247 37.823 723.0 123130.0 25 0 21473.0 13657 HPVQLDLL 8 126 467.7720255636932 933.5294981941864 2 467.7707397341728 MULTI CID FTMS 0 0 0 7245 93568.1640625 0.7836088196716828 1 -0.0427703857421875 2 Unmodified _HPVQLDLL_ ENSG00000091536|ENST00000647165|MYO15A 32.116972079565 0.368454113111938 6 {I|L}{I|L} 2 6 22.206 0.0 0.0 2.3787 0.0 0.0 689.3507547633254 0.0 689.3507547633254 0.0 7.909393809954892 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + {I|L}{I|L} 2.3787 + + 701 + 1 1.541 71917.5 1.0 1950 5295 7245 SUDHL4_400M_050219_2,7247 SUDHL4_400M_050219_2,7247,HPVQLDLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7248 37.837 800.0 126770.0 25 0 7934.7 + -1 ALYDEVRTV 9 133 533.2804908427138 1064.5464287522277 2 533.2800781130791 MULTI CID FTMS 0 0 0 7245 96257.0546875 1.0 0 0.0 3 Oxidation (M) _LAM(Oxidation (M))LSTEVSV_ ENSG00000101596|ENST00000320876|SMCHD1;ENST00000577300.1_1_18:2703698-2706469:+|nuORF;nc|ENSG00000101596|A6NHR9-2|SMCHD1 25.399314129420983 0.3980215340001851 6 [{I|L}A]YDEVRTV 9 -1 + 62.189 0.0 0.0 5.8419 5.8419 83.775 0.0 0.0 0.0 27.147642715192504 5.2827377716704405 5.2827377716704405 5.2827377716704405 0 0.3494850021680094 2.0 0.1861818737241735 0.0 [{I|L}A]YDEVRTV;[{I|L}A]YDEVRS{I|L};[{I|L}A]YDE[R{I|L}]SV 5.8419;5.3456;5.2816 -;-;- 142 + 1 1.541 82997.5 0.4799999892711639 1951 5295 7245 SUDHL4_400M_050219_2,7248 SUDHL4_400M_050219_2,7248,LAMLSTEVSV False False ALYDEVRTV 37.836986 533.280078113079 397033.96875 7245.0 ENSG00000101596|ENST00000320876|SMCHD1;;ENST00000577300.1_1_18:2703698-2706469:+|nuORF;;nc|ENSG00000101596|A6NHR9-2|SMCHD1 6.234127203623454 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7250 37.853 722.0 113410.0 25 0 14764.0 28088 PPILSTKS 8 129 421.7511925075163 841.4878320818326 2 421.7512390017509 MULTI CID FTMS 0 0 0 7249 116515.8046875 0.7171979119830151 6 -0.1587982177734375 1 Unmodified _PPILSTKS_ ENST00000564902.5_1_15:30916943-30922907:+|nuORF 2.302733041254933 0.8103549651115762 6 {I|L} 1 7 8.9794 0.0 0.0 1.0671 0.0 0.0 710.3932256138623 0.0 710.3932256138623 0.0 8.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0671 + + 7 + 1 1.541 67440.9 1.0 1952 5296 7249 SUDHL4_400M_050219_2,7250 SUDHL4_400M_050219_2,7250,PPILSTKS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7251 37.858 266.0 189780.0 25 0 25216.0 -1 0 77 473.2852824991074 472.2780060325074 1 473.2855712771416 MULTI CID FTMS 0 0 0 7249 128406.2421875 1.0 0 0.0 2 6 [{I|L}A][RN] 4 -1 + 27.447 0.0 0.0 5.8117 5.8117 91.737 0.0 0.0 0.0 11.249387366083 0.0 0.0 27.44727494896693 0 0.0 2.0 0.0 0.0 [{I|L}A][RN] 5.8117 - 48 1 1.541 44911.2 1.0 1953 5296 7249 SUDHL4_400M_050219_2,7251 SUDHL4_400M_050219_2,7251, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7252 37.872 800.0 149890.0 25 0 10876.0 + 31289 RLYEDSGYSSF 11 108 662.2957293765843 1322.5769058199685 2 662.2964965701103 MULTI CID FTMS 0 0 0 7249 99890.9453125 0.625233178073623 -2 0.0848121643066406 3 Unmodified _RLYEDSGYSSF_ ENSG00000112029|ENST00000229758|FBXO5;nc|ENSG00000112029|Q9UKT4-2|FBXO5 79.42699986076722 0.0080827643292781 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVEDSGYSS{M(Oxidation (M))|F} 12 4 + 97.45 0.0 0.0 7.3682 7.3682 90.183 0.0 0.0 0.0 8.530669696855313 16.611814434466197 8.530669696855313 8.530669696855313 0 1.305462187404089 1.3979400086720375 1.960409376976188 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVEDSGYSS{M(Oxidation (M))|F};[R{I|L}]YEDSGYSS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[DV]{NN|[MP]|[D{I|L}]|[EV]}GYSS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[{I|L}T][WE]GYSS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[DV]{[RE]|[WV]}YSS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{NN|[MP]|[D{I|L}]|[EV]}GYSS{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}VV[WE]GYSS{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[RE]|[WV]}YSS{M(Oxidation (M))|F};{[CA]|SS}{M(Oxidation (M))|F}[DV]{[RE]|[WV]}YSS{M(Oxidation (M))|F};[MT]G[{M(Oxidation (M))|F}V]{NN|[MP]|[D{I|L}]|[EV]}GYSS{M(Oxidation (M))|F} 7.3682;6.7232;6.2899;6.1334;5.5021;5.4852;4.8681;4.6974;4.6634;4.5766 -;+;-;-;-;-;-;-;-;- + 1121 1 1.541 90577.2 0.4799999892711639 1954 5296 7249 SUDHL4_400M_050219_2,7252 SUDHL4_400M_050219_2,7252,RLYEDSGYSSF True True RLYEDSGYSSF 37.872127 662.29649657011 786541.0 7249.0 ENSG00000112029|ENST00000229758|FBXO5;;nc|ENSG00000112029|Q9UKT4-2|FBXO5 8.653745651245117 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7253 37.878 320.0 177720.0 25 0 27836.0 -1 IGLCPWTW 8 86 516.7499898818314 1031.4854268304628 2 516.7501708865166 MULTI CID FTMS 0 0 0 7249 96087.1875 0.6349798021329757 -2 0.0848121643066406 4 Carbamidomethyl (C) _IGLC(Carbamidomethyl (C))PWTW_ ENST00000265801.6_2_8:20104216-20104552:-|nuORF 20.871210003555333 0.6025813472596342 6 {[VA]|[{I|L}G]}{I|L} 3 -1 33.2 0.0 0.0 3.2186 0.0 0.0 0.0 745.2748507135374 745.2748507135374 19.39983094072403 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L} 3.2186 + + 58 + 1 1.541 49881.9 1.0 1955 5296 7249 SUDHL4_400M_050219_2,7253 SUDHL4_400M_050219_2,7253,IGLCPWTW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7254 37.883 294.0 390380.0 25 0 46447.0 + 31052 RLIEESVTV 9 96 523.2979653394276 1044.5813777456551 2 523.2975341677666 MULTI CID FTMS 0 0 0 7249 217428.1875 0.2653958905130599 -4 0.138671875 5 Unmodified _RLIEESVTV_ ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769-3|NUP160;nc|ENSG00000030066|Q12769|NUP160 46.0223103267499 0.0490911897871712 6 EESVTV 6 3 61.675 0.0 0.0 5.9043 0.0 0.0 382.26777846504064 0.0 382.26777846504064 0.0 25.07638152291939 0.0 0.0 0 1.274227503252014 0.0 1.2302046884880935 0.0 + EESVTV 5.9043 + + 402 1 1.541 97471.0 1.0 1956 5296 7249 SUDHL4_400M_050219_2,7254 SUDHL4_400M_050219_2,7254,RLIEESVTV True True RLIEESVTV 37.883364 523.297534167767 5393573.5 7249.0 nc|ENSG00000030066|Q12769|NUP160;;nc|ENSG00000030066|Q12769-3|NUP160;;ENSG00000030066|ENST00000378460|NUP160 4.92663033803304 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7256 37.889 180.0 205220.0 25 0 12917.0 -1 YLFYCKNCRFY 11 57 788.854298373677 1575.694043814154 2 789.3567382693291 MULTI CID FTMS 0 0 0 7255 232310.125 0.4130405697328955 3 -0.0791282653808593 1 Carbamidomethyl (C) _YLFYC(Carbamidomethyl (C))KNCRFY_ ENST00000421254.1_1_1:117569228-117575092:-|nuORF 3.2813086475875832 0.8596665074481906 6 QNA[Y{M(Oxidation (M))|F}] 5 -1 33.328 0.0 0.0 2.1151 0.0 0.0 934.4113026349625 0.0 934.4113026349625 0.0 26.338031200885155 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 QNA[Y{M(Oxidation (M))|F}] 2.1151 - 81 1 1.541 30445.9 1.0 1957 5297 7255 SUDHL4_400M_050219_2,7256 SUDHL4_400M_050219_2,7256,YLFYCKNCRFY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7257 37.898 466.0 108980.0 25 0 10308.0 + 25820 NLAENISRV 9 98 508.2798765713172 1014.5452002094344 2 508.2801086306572 MULTI CID FTMS 0 0 0 7255 103855.6015625 0.1937580784050568 6 -0.116485595703125 2 Unmodified _NLAENISRV_ ENSG00000068976|ENST00000164139|PYGM;ENSG00000100504|ENST00000216392|PYGL;ENSG00000100994|ENST00000216962|PYGB;nc|ENSG00000068976|P11217-2|PYGM;nc|ENSG00000100504|P06737-2|PYGL 33.4449034751529 0.1114409586740657 6 {[QV]|[N{I|L}]|[RA]|[KV]}AE 4 5 53.43 0.0 0.0 5.2664 0.0 0.0 0.0 584.3161712389845 584.3161712389845 41.2113751626007 0.0 0.0 0.0 0 1.5 2.0 0.0 0.6747425010840047 + {[QV]|[N{I|L}]|[RA]|[KV]}AE 5.2664 + + 189 1 1.541 46636.4 1.0 1958 5297 7255 SUDHL4_400M_050219_2,7257 SUDHL4_400M_050219_2,7257,NLAENISRV True True NLAENISRV 37.897671 508.280108630657 4861885.0 7255.0 nc|ENSG00000100504|P06737-2|PYGL;;ENSG00000100504|ENST00000216392|PYGL;;ENSG00000100994|ENST00000216962|PYGB;;ENSG00000068976|ENST00000164139|PYGM;;nc|ENSG00000068976|P11217-2|PYGM 5.883166154225667 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7259 37.903 50.0 915420.0 25 0 128250.0 + 11815 GLNEEIARV 9 74 500.7746127772632 999.5346726213264 2 500.7745544314384 MULTI CID FTMS 0 0 0 7258 970571.375 0.3270661910711261 -6 0.199371337890625 1 Unmodified _GLNEEIARV_ ENSG00000080986|ENST00000261597|NDC80 39.94969957227396 0.0757326808254658 6 {[VA]|[{I|L}G]}NEE{I|L}ARV 9 0 + 78.419 0.0 0.0 7.8456 7.8456 92.761 0.0 0.0 0.0 65.65939540574279 9.07831620036704 9.07831620036704 9.208187539523747 0 0.805462187404089 2.0 0.3807196863200844 0.4247425010840047 + + {[VA]|[{I|L}G]}NEE{I|L}ARV;{[VA]|[{I|L}G]}GGEE{I|L}ARV 7.8456;6.9243 +;- + 95 + 1 1.541 41074.3 1.0 1959 5298 7258 SUDHL4_400M_050219_2,7259 SUDHL4_400M_050219_2,7259,GLNEEIARV True True GLNEEIARV 37.902868 500.774554431438 28042250.0 7258.0 ENSG00000080986|ENST00000261597|NDC80 6.418787161509196 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7260 37.917 800.0 92370.0 25 0 13304.0 + 14093 IAQDFKTDL 9 129 525.7772873043072 1049.5400216754142 2 525.7772094607353 MULTI CID FTMS 0 0 0 7258 80456.8984375 0.353675084618067 -6 0.199371337890625 2 Unmodified _IAQDFKTDL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF 32.78568957990786 0.1150597335874693 6 {I|L}AQDP 5 5 70.49 0.0 0.0 6.7162 0.0 0.0 0.0 522.2515963190061 522.2515963190061 54.463950151760656 0.0 0.0 0.0 0 0.805462187404089 2.0 0.5 0.4247425010840047 {I|L}AQDP 6.7162 - 498 + 1 1.541 60905.1 0.4900000095367431 1960 5298 7258 SUDHL4_400M_050219_2,7260 SUDHL4_400M_050219_2,7260,IAQDFKTDL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7261 37.924 431.0 174380.0 25 0 13389.0 + 42781 VVISSDGQF 9 114 476.2435721540419 950.4725913748838 2 476.2431518435478 MULTI CID FTMS 0 0 0 7258 98477.3984375 0.907488701663588 -2 0.060699462890625 3 Unmodified _VVISSDGQF_ ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000514183.5_1_5:180665952-180670713:-|nuORF 9.347437153973935 0.588369872918737 6 {M(Oxidation (M))|F} 1 8 16.99 0.0 0.0 1.7875 0.0 0.0 785.393472577812 0.0 785.393472577812 0.0 -2.93182501400722 -2.93182501400722 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.7875 + + 154 + 1 1.541 61150.7 1.0 1961 5298 7258 SUDHL4_400M_050219_2,7261 SUDHL4_400M_050219_2,7261,VVISSDGQF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7263 37.929 82.0 714750.0 25 0 76939.0 + 1749 ALQPEPIKV 9 80 497.8002792590945 993.586005584989 2 497.8003112673759 MULTI CID FTMS 0 0 0 7262 766974.4375 0.780690088913335 1 -0.0381355285644531 1 Unmodified _ALQPEPIKV_ ENSG00000137642|ENST00000260197|SORL1;ENST00000532451.1_1_11:121323091-121416136:+|nuORF 29.081581746732265 0.1611639662936252 6 [{I|L}A]Q 3 6 30.942 0.0 0.0 3.1142 0.0 0.0 0.0 678.3839056417274 678.3839056417274 4.338162265355408 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + [{I|L}A]Q 3.1142 + + 161 1 1.541 56403.9 1.0 1962 5299 7262 SUDHL4_400M_050219_2,7263 SUDHL4_400M_050219_2,7263,ALQPEPIKV False True ALQPEPIKV 37.929145 497.800311267376 11013856.0 7262.0 ENST00000532451.1_1_11:121323091-121416136:+|nuORF;;ENSG00000137642|ENST00000260197|SORL1 9.440974871317543 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7264 37.943 800.0 84598.0 25 0 22004.0 -1 0 58 1191.478258387716 2380.9419638422323 2 1191.982226550579 MULTI CID FTMS 0 0 0 7262 57486.1015625 0.6519810528903078 1 -0.0381355285644531 2 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{[WT]|[RM]}TT{I|L}[HT]Q 11 -1 27.489 0.0 0.0 1.1545 0.0 0.0 0.0 1044.28556670772 1044.28556670772 9.38480134575148 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.805462187404089 0.3807196863200844 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}M{[WT]|[RM]}TT{I|L}[HT]Q 1.1545 - 135 1 1.541 52745.2 0.3700000047683716 1963 5299 7262 SUDHL4_400M_050219_2,7264 SUDHL4_400M_050219_2,7264, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7265 37.949 307.0 331710.0 25 0 46711.0 + 18659 LAHMKAKG 8 106 428.2478762730455 0 428.2484619021416 PEAK CID FTMS 0 0 0 7262 120468.1875 0.6241346971536168 -5 0.1721878051757812 3 Unmodified _LAHMKAKG_ REV__ENSG00000181215|ENST00000531445|C4orf50 2.889219685676258 0.5898224805723975 6 AEV 3 -1 14.693 0.0 0.0 1.7195 0.0 0.0 112.04829053261604 440.2623385065063 552.3106290391223 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AEV 1.7195 - 12 + 1 1.541 83496.7 1.0 1964 5299 7262 SUDHL4_400M_050219_2,7265 SUDHL4_400M_050219_2,7265,LAHMKAKG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7266 37.962 800.0 39523.0 25 0 12032.0 -1 0 30 1080.795223974054 3239.3638425223626 3 1081.465380847454 MULTI CID FTMS 0 0 0 7262 88884.671875 1.0 0 0.0 4 6 C 1 -1 6.9897 0.0 0.0 0.21577 0.0 0.0 2158.783838715525 974.5304659479124 3133.3143046634377 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.21577 - 8 + 1 1.541 39361.2 0.4000000059604645 1965 5299 7262 SUDHL4_400M_050219_2,7266 SUDHL4_400M_050219_2,7266, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7269 37.973 221.0 288540.0 25 0 37851.0 16799 KGLGGTRH 8 88 413.2395813335268 824.4646097338535 2 413.2391235232353 MULTI CID FTMS 0 0 0 7268 190659.078125 0.6185031270389214 16 -0.8043746948242188 1 Unmodified _KGLGGTRH_ ENST00000305850.9_1_16:81040200-81040455:+|nuORF 5.230669730166228 0.792582437072536 6 P 1 8 8.6759 0.0 0.0 1.0523 0.0 0.0 709.4009709782856 0.0 709.4009709782856 0.0 4.0718171151904405 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.0523 - 19 + 1 1.541 53687.6 1.0 1966 5301 7268 SUDHL4_400M_050219_2,7269 SUDHL4_400M_050219_2,7269,KGLGGTRH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7270 37.982 492.0 149380.0 25 0 13759.0 + 36931 TEVGEKIAL 9 114 480.2742855990458 958.5340182648916 2 480.2750732302666 MULTI CID FTMS 0 0 0 7268 82710.828125 0.2326347499073151 -5 0.1295738220214843 2 Unmodified _TEVGEKIAL_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;ENST00000460032.1_1_X:24091216-24091381:+|nuORF 24.020572477871973 0.2255576514309169 6 {[TV]|[{I|L}S]}N{I|L}VA 6 6 24.728 0.0 0.0 2.5798 0.0 0.0 0.0 358.1626398113704 358.1626398113704 2.2809291435026324 0.0 0.0 0.0 0 0.0 1.0 0.7059771852360797 0.0 {[TV]|[{I|L}S]}N{I|L}VA 2.5798 - 506 1 1.541 60584.0 1.0 1967 5301 7268 SUDHL4_400M_050219_2,7270 SUDHL4_400M_050219_2,7270,TEVGEKIAL False True TEVGEKIAL 37.981962 480.275073230267 1832782.25 7268.0 ENST00000460032.1_1_X:24091216-24091381:+|nuORF;;ENSG00000180574|ENST00000538173|EIF2S3B;;ENSG00000130741|ENST00000253039|EIF2S3 1.5478518853584926 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7271 37.996 800.0 191330.0 25 0 37579.0 + 38805 TVFDAKRLIGR 11 89 425.92271524159406 1274.7463163249822 3 425.9226867556572 MULTI CID FTMS 0 0 0 7268 110407.3125 0.382593909765667 -4 0.08319091796875 3 Unmodified _TVFDAKRLIGR_ ENSG00000044574|ENST00000324460|HSPA5;ENSG00000109971|ENST00000534624|HSPA8;ENSG00000173110|ENST00000309758|HSPA6;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204390|ENST00000375654|HSPA1L;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000442006.2_1_1:39174637-39175513:+|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8;nc|ENSG00000204389|P0DMV8-2|HSPA1A;nc|ENSG00000225217|P48741|HSPA7 26.120906184454547 0.478875788770541 6 TV{M(Oxidation (M))|F}D 4 7 56.186 0.0 0.0 4.4076 0.0 0.0 0.0 809.5107801616324 809.5107801616324 30.243500300354142 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + TV{M(Oxidation (M))|F}D 4.4076 + + 40 + 1 1.541 124056.2 0.9700000286102296 1968 5301 7268 SUDHL4_400M_050219_2,7271 SUDHL4_400M_050219_2,7271,TVFDAKRLIGR False True TVFDAKRLIGR 37.99578 425.922686755657 1485529.75 7268.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000225217|P48741|HSPA7;;nc|ENSG00000109971|P11142-2|HSPA8;;ENSG00000044574|ENST00000324460|HSPA5;;ENSG00000173110|ENST00000309758|HSPA6;;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;;ENSG00000204388|ENST00000375650|HSPA1B;;nc|ENSG00000204389|P0DMV8-2|HSPA1A;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENSG00000204390|ENST00000375654|HSPA1L;;ENST00000442006.2_1_1:39174637-39175513:+|nuORF;;ENSG00000204389|ENST00000375651|HSPA1A;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF 4.812753915786743 3.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7274 38.011 516.0 153200.0 25 0 7048.5 + 12484 GVAQPGVGF 9 111 416.2230359972473 830.4315190612946 2 416.2221557497978 MULTI CID FTMS 0 0 0 7273 87945.8203125 0.6799263724382864 1 -0.0300674438476562 1 Unmodified _GVAQPGVGF_ ENST00000512894.5_3_3:134205280-134214160:+|nuORF;ENST00000513612.6_1_3:134205280-134206907:+|nuORF 34.18733598223924 0.1073653526364521 6 [VG]PGS 5 5 33.188 0.0 0.0 3.9964 0.0 0.0 0.0 430.2194278026566 430.2194278026566 14.771212547196622 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [VG]PGS 3.9964 - 182 1 1.541 69357.3 1.0 1969 5303 7273 SUDHL4_400M_050219_2,7274 SUDHL4_400M_050219_2,7274,GVAQPGVGF True True GVAQPGVGF 38.011472 416.222155749798 826704.0 7273.0 ENST00000513612.6_1_3:134205280-134206907:+|nuORF;;ENST00000512894.5_3_3:134205280-134214160:+|nuORF 6.036853790283203 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7275 38.025 800.0 119820.0 25 0 20577.0 + + -1 ILDAGGHNVTI 11 113 555.3010941211686 1108.587635309137 2 555.3023559451103 MULTI CID FTMS 0 0 0 7273 118793.1484375 0.679432574232996 -2 0.033294677734375 2 Carbamidomethyl (C) _LLDYSC(Carbamidomethyl (C))LLL_ ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1 57.47134341890925 0.0274820932774257 6 {I|L}{I|L}DA 4 -1 56.274 0.0 0.0 5.0762 0.0 0.0 0.0 693.3308199518186 693.3308199518186 24.15417887645055 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3494850021680094 0.0 {I|L}{I|L}DA 5.0762 - 2680 + 1 1.541 78589.8 0.5600000023841858 1970 5303 7273 SUDHL4_400M_050219_2,7275 SUDHL4_400M_050219_2,7275,LLDYSCLLL False False ILDAGGHNVTI 38.025303 555.30235594511 922813.75 7273.0 ENSG00000173692|ENST00000308696|PSMD1;;nc|ENSG00000173692|Q99460-2|PSMD1 3.29204003016154 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7276 38.03 247.0 373270.0 25 0 46420.0 + 18617 LAEVGRVL 8 95 428.76620887502986 855.5178648168597 2 428.7657958865166 MULTI CID FTMS 0 0 0 7273 248531.453125 1.0 0 0.0 3 Unmodified _LAEVGRVL_ ENSG00000010165|ENST00000361735|METTL13;nc|ENSG00000010165|Q8N6R0-1|METTL13;nc|ENSG00000010165|Q8N6R0-2|METTL13;nc|ENSG00000010165|Q8N6R0-3|METTL13;nc|ENSG00000010165|Q8N6R0-4|METTL13 34.10243960390752 0.3329570729325616 6 {I|L}AEV 4 4 63.245 0.0 0.0 7.3926 0.0 0.0 0.0 440.2623856865961 440.2623856865961 52.96781048411282 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.4247425010840047 0.0 + {I|L}AEV 7.3926 + + 54 + 1 1.541 77858.4 1.0 1971 5303 7273 SUDHL4_400M_050219_2,7276 SUDHL4_400M_050219_2,7276,LAEVGRVL False True LAEVGRVL 38.029918 428.765795886517 1121352.5 7273.0 nc|ENSG00000010165|Q8N6R0-4|METTL13;;ENSG00000010165|ENST00000361735|METTL13;;nc|ENSG00000010165|Q8N6R0-3|METTL13;;nc|ENSG00000010165|Q8N6R0-2|METTL13;;nc|ENSG00000010165|Q8N6R0-1|METTL13 2.273315111796061 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7278 38.037 238.0 187250.0 25 0 22302.0 + 23806 VLNPETTVV 9 74 486.2732555522106 970.5319581712212 2 486.2718383669853 MULTI CID FTMS 0 0 0 7277 59629.0234375 0.2970653773736771 -3 0.0633621215820312 1 Unmodified _LVDTGLPEK_ ENSG00000138801|ENST00000265174|PAPSS1 16.942295170755138 0.3780752226737986 6 [{I|L}V]N 3 7 18.952 0.0 0.0 1.9528 0.0 0.0 0.0 641.3147395035056 641.3147395035056 4.348331157524971 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}V]N 1.9528 - 68 1 1.541 41521.8 1.0 1972 5304 7277 SUDHL4_400M_050219_2,7278 SUDHL4_400M_050219_2,7278,LVDTGLPEK False False VLNPETTVV 38.036901 486.271838366985 1271213.25 7277.0 ENSG00000138801|ENST00000265174|PAPSS1 2.468911478916804 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7279 38.049 697.0 139060.0 25 0 15306.0 + 23039 LSKQPMPL 8 120 457.2644247402373 912.5142965472744 2 457.2639953494072 MULTI CID FTMS 0 0 0 7277 103782.6328125 0.6433201171326784 -11 0.3141288757324219 2 Unmodified _LSKQPMPL_ REV__ENSG00000117479|ENST00000236137|SLC19A2 9.347437153973935 0.7675937258251505 6 [KG][RD][EP]V{I|L} 8 -1 [KG][RD][EP]V + + 11.783 -1.8225 -0.23323 1.2912 1.2912 49.97 0.0 0.0 0.0 0.0 -12.029544691716564 -12.029544691716564 0.0 0 0.0 0.0 0.0 0.0 [KG][RD][EP]V{I|L} 1.2912 - 57 + 1 1.541 78946.0 1.0 1973 5304 7277 SUDHL4_400M_050219_2,7279 SUDHL4_400M_050219_2,7279,LSKQPMPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7280 38.054 286.0 239310.0 25 0 28148.0 + 45694 YWQNHPEL 8 95 543.7535564877556 1085.4925600423112 2 543.7534667849541 MULTI CID FTMS 0 0 0 7277 131068.8671875 0.1320995075453689 -3 0.0633621215820312 3 Unmodified _YWQNHPEL_ ENSG00000119203|ENST00000238112|CPSF3 46.020951573049366 0.1579632664462935 6 YWQNH[EP]{I|L} 8 0 + 68.3 0.0 0.0 6.2921 6.2921 90.081 0.0 0.0 0.0 58.02266981522129 5.503942908243218 5.503942908243218 9.262137858390815 0 0.6747425010840047 2.0 0.805462187404089 0.5 + + YWQNH[EP]{I|L};YWQGGH[EP]{I|L};YW[AG]NH[EP]{I|L};YWQ{[WT]|[RM]}[R{M(Oxidation (M))|F}];YADQ{[WT]|[RM]}[R{M(Oxidation (M))|F}];YW[AG]{[WT]|[RM]}[R{M(Oxidation (M))|F}];[MD][KC]{[WT]|[RM]}[R{M(Oxidation (M))|F}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{[WT]|[RM]}[KC]{NN|[MP]|[D{I|L}]|[EV]} 6.2921;5.4388;5.4388;3.8269;3.09;2.9673;0.66127;0.29869 +;-;-;-;-;-;-;- + 342 + 1 1.541 57738.1 1.0 1974 5304 7277 SUDHL4_400M_050219_2,7280 SUDHL4_400M_050219_2,7280,YWQNHPEL False True YWQNHPEL 38.054268 543.753466784954 11115633.0 7277.0 ENSG00000119203|ENST00000238112|CPSF3 7.357713540395101 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7281 38.068 800.0 175190.0 25 0 19025.0 + 7223 EERADLIAY 9 119 540.2722596279355 1078.5299663226708 2 540.2716552615166 MULTI CID FTMS 0 0 0 7277 103120.75 0.3597940018123461 -3 0.0633621215820312 4 Unmodified _EERADLIAY_ ENSG00000172115|ENST00000305786|CYCS 43.77239144664712 0.0547478964384323 6 [{I|L}A]DDW{I|L}{I|L}AY 9 5 + 62.818 0.0 0.0 5.8245 5.8245 79.101 0.0 0.0 0.0 0.5014445271442725 43.43302134450971 0.5014445271442725 1.326255652745914 0 1.0 0.8538719643217619 1.4436726795685342 0.0 [{I|L}A]DDW{I|L}{I|L}AY;{NN|[MP]|[D{I|L}]|[EV]}WAD{I|L}{I|L}AY;[{I|L}A][WD]D{I|L}{I|L}AY;{NN|[MP]|[D{I|L}]|[EV]}WW{I|L}{I|L}AY;{[QN]|[E{I|L}]|[KN]}[DG]AD{I|L}{I|L}AY;{[QN]|[E{I|L}]|[KN]}[DG]W{I|L}{I|L}AY;{[QN]|[E{I|L}]|[KN]}{[QD]|[EN]|[WG]|[KD]|[RS]}D{I|L}{I|L}AY;[PS]{[ET]|[MV]}AD{I|L}{I|L}AY;[QT]{[QG]|[NA]}AD{I|L}{I|L}AY;{[DS]|[MA]|[CV]|TT}[DP]W{I|L}{I|L}AY 5.8245;5.7015;5.6612;5.5432;5.4751;5.3119;5.1486;5.0678;5.0328;5.0018 -;-;-;-;-;-;-;-;-;- 2552 1 1.541 106382.9 0.5099999904632568 1975 5304 7277 SUDHL4_400M_050219_2,7281 SUDHL4_400M_050219_2,7281,EERADLIAY True True EERADLIAY 38.068099 540.271655261517 1721425.875 7277.0 ENSG00000172115|ENST00000305786|CYCS 4.190616210301717 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7283 38.083 616.0 125990.0 25 0 18946.0 + 2938 AVHDSFVAV 9 105 472.7456033116984 943.4766536901968 2 472.7451354861259 MULTI CID FTMS 0 0 0 7282 99116.1640625 1.0 0 0.0 1 Unmodified _AVHDSFVAV_ ENSG00000080345|ENST00000444746|RIF1;nc|ENSG00000080345|Q5UIP0-2|RIF1 44.40701690623563 0.0526327925666318 6 {[VA]|[{I|L}G]}HDS{M(Oxidation (M))|F}VAV 9 0 + 32.632 0.0 0.0 3.4586 3.4586 75.006 0.0 0.0 0.0 3.863717505104973 9.889917747712651 3.863717505104973 3.863717505104973 0 0.7742275032520141 1.0969100130080565 0.4247425010840047 0.0 + + {[VA]|[{I|L}G]}HDS{M(Oxidation (M))|F}VAV;{[TV]|[{I|L}S]}P{M(Oxidation (M))|F}[DP]VAV;[{I|L}A]GN[WD]VAV;{[TV]|[{I|L}S]}N{[SA]|[TG]}[WP]AV;[TP]V{M(Oxidation (M))|F}[DP]VAV;{[TV]|[{I|L}S]}P{[CA]|SS}{[QG]|[NA]}VAV;[TP][HS]S{M(Oxidation (M))|F}VAV;{[VA]|[{I|L}G]}AN[WD]VAV;{[CP]|[EA]}P[DP]{M(Oxidation (M))|F}VAV;[HD]{[VA]|[{I|L}G]}S{M(Oxidation (M))|F}VAV 3.4586;3.0491;2.6404;2.422;2.2193;2.2056;2.1708;2.0681;1.7542;1.7057 +;-;-;-;-;-;-;-;-;- + 251 1 1.541 64605.8 1.0 1976 5305 7282 SUDHL4_400M_050219_2,7283 SUDHL4_400M_050219_2,7283,AVHDSFVAV True True AVHDSFVAV 38.082738 472.745135486126 472567.84375 7282.0 ENSG00000080345|ENST00000444746|RIF1;;nc|ENSG00000080345|Q5UIP0-2|RIF1 5.89086929957072 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7284 38.087 204.0 284070.0 25 0 47781.0 + 16955 KINEAIVAV 9 72 478.7924189320953 955.5702849309904 2 478.7923461794853 MULTI CID FTMS 0 0 0 7282 306127.5 0.2724846693855571 -4 0.1015434265136718 2 Unmodified _KINEAIVAV_ ENSG00000087302|ENST00000261700|RTRAF 22.736283301280096 0.2418982879461534 6 {[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}K{I|L}VAV 9 4 + 52.598 0.0 0.0 5.5043 5.5043 90.237 0.0 0.0 0.0 8.256886463274284 37.11303739409743 8.256886463274284 21.76091259055681 0 1.1989700043360187 0.0 0.3494850021680094 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}K{I|L}VAV;{[QD]|[EN]|[WG]|[KD]|[RS]}[K{I|L}]A{I|L}VAV;{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}V[K{I|L}]AV 5.5043;3.227;2.5936 -;-;- 50 1 1.541 49981.0 1.0 1977 5305 7282 SUDHL4_400M_050219_2,7284 SUDHL4_400M_050219_2,7284,KINEAIVAV False True KINEAIVAV 38.086624 478.792346179485 6053606.5 7282.0 ENSG00000087302|ENST00000261700|RTRAF 0.7103360295295715 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7285 38.091 233.0 208800.0 25 0 28533.0 -1 0 82 412.228088019318 411.220811552718 1 412.2308837771416 MULTI CID FTMS 0 0 0 7282 170845.078125 0.4967103078444276 -9 0.2311172485351562 3 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.541 44832.9 1.0 1978 5305 7282 SUDHL4_400M_050219_2,7285 SUDHL4_400M_050219_2,7285, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7286 38.105 800.0 181780.0 25 0 32080.0 + 14736 ILAQEIVKA 9 131 492.8079591466382 983.6013653600764 2 492.8079711794853 MULTI CID FTMS 0 0 0 7282 116090.9375 0.4014464091720894 -2 0.0682487487792968 4 Unmodified _ILAQEIVKA_ ENSG00000142230|ENST00000270225|SAE1 57.72198328787511 0.0273433238377839 6 {I|L}{I|L}AQE{I|L}VKA 9 0 + 80.583 0.0 0.0 8.1927 8.1927 87.28 0.0 0.0 0.0 36.47817481888637 3.1639083610437666 3.1639083610437666 3.1639083610437666 0 1.079689690656103 2.0 0.3252574989159953 0.6109243748081782 + + {I|L}{I|L}AQE{I|L}VKA;{I|L}{I|L}AQE{I|L}[KG]{I|L};{I|L}{I|L}AQE{I|L}[KA]V;{I|L}{I|L}A[AG]E{I|L}VKA;{I|L}{I|L}A[AG]E{I|L}[KG]{I|L};{I|L}{I|L}A[AG]E{I|L}[KA]V;{I|L}{I|L}AQ[K{I|L}]AD{I|L};{I|L}{I|L}AQ[K{I|L}]DA{I|L};{I|L}{I|L}AQ[K{I|L}]AEV;{I|L}{I|L}A[AG][K{I|L}]AD{I|L} 8.1927;7.871;7.4664;7.2565;6.9348;6.5303;5.9839;5.8749;5.5793;5.0477 +;-;-;-;-;-;-;-;-;- + 924 + 1 1.541 114535.1 0.5299999713897705 1979 5305 7282 SUDHL4_400M_050219_2,7286 SUDHL4_400M_050219_2,7286,ILAQEIVKA True True ILAQEIVKA 38.10482 492.807971179485 1596634.375 7282.0 ENSG00000142230|ENST00000270225|SAE1 4.114466349283855 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7287 38.112 391.0 175910.0 25 0 23009.0 38222 TPRPTRAA 8 106 435.25071808231087 868.4868832314218 2 435.2511169314384 MULTI CID FTMS 0 0 0 7282 96462.703125 0.2248407660478047 -13 0.3697891235351562 5 Unmodified _TPRPTRAA_ ENST00000469202.5_1_7:32997059-33014827:+|nuORF;ENST00000494374.5_1_7:32997059-33028356:+|nuORF 2.302733041254933 0.8103549651115762 6 P 1 7 9.1487 0.0 0.0 1.0534 0.0 0.0 753.4233207697991 0.0 753.4233207697991 0.0 7.72870814119921 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 1.0534 + + 12 + 1 1.541 60301.8 1.0 1980 5305 7282 SUDHL4_400M_050219_2,7287 SUDHL4_400M_050219_2,7287,TPRPTRAA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7289 38.124 562.0 108850.0 25 0 5233.2 -1 RWRCDCRWFRF 11 97 872.9065698314702 1743.7985867297402 2 873.4119140505791 MULTI CID FTMS 0 0 0 7288 133103.078125 0.8134808917486369 3 -0.1116371154785156 1 2 Carbamidomethyl (C) _RWRC(Carbamidomethyl (C))DC(Carbamidomethyl (C))RWFRF_ ENST00000602980.1_1_7:29725056-29725440:+|nuORF 0.0 0.8751479354844584 6 D{I|L}N[HA]A{M(Oxidation (M))|F}VEM{I|L}Q 12 -1 43.571 0.0 0.0 2.4986 0.0 0.0 357.1270301885277 0.0 357.1270301885277 0.0 35.612271369356975 0.0 0.0 0 0.5796896906561032 0.0 0.3494850021680094 0.2887254899964357 D{I|L}N[HA]A{M(Oxidation (M))|F}VEM{I|L}Q 2.4986 - 441 + 1 1.541 46744.5 1.0 1981 5306 7288 SUDHL4_400M_050219_2,7289 SUDHL4_400M_050219_2,7289,RWRCDCRWFRF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7290 38.135 593.0 230760.0 25 0 26877.0 + 42988 VVVAVGRAL 9 119 442.29014265090495 882.5657323686099 2 442.2899047732353 MULTI CID FTMS 0 0 0 7288 183158.890625 0.655089432780757 -4 0.1160469055175781 2 Unmodified _VVVAVGRAL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000414411.3_1_11:61081295-61081943:-|nuORF 34.10243960390752 0.1078313939113124 6 VVVAVG 6 3 56.203 0.0 0.0 6.3681 0.0 0.0 0.0 355.20810877017817 355.20810877017817 37.78659694992122 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.0 0.0 + VVVAVG 6.3681 + + 138 + 1 1.541 112260.2 1.0 1982 5306 7288 SUDHL4_400M_050219_2,7290 SUDHL4_400M_050219_2,7290,VVVAVGRAL True True VVVAVGRAL 38.134628 442.289904773235 1376787.75 7288.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000414411.3_1_11:61081295-61081943:-|nuORF 2.1596038341522217 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7291 38.148 800.0 138680.0 25 0 17339.0 + 15052 ILYNIKQEY 9 111 592.3210906450264 1182.6276283568527 2 592.3209106326103 MULTI CID FTMS 0 0 0 7288 118460.2109375 0.8426287399347121 -2 0.0819091796875 3 Unmodified _ILYNIKQEY_ ENSG00000135334|ENST00000257787|AKIRIN2 60.07390631473393 0.0260411565414776 6 {I|L}{I|L}Y{M(Oxidation (M))|F}QK{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 9 5 + 63.963 0.0 0.0 5.4085 5.4085 83.353 0.0 0.0 0.0 6.562959475437751 6.562959475437751 6.562959475437751 6.562959475437751 0 0.4247425010840047 2.0 0.0 0.6861818737241735 {I|L}{I|L}Y{M(Oxidation (M))|F}QK{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{I|L}{I|L}YEQE{I|L}{I|L}Y;{I|L}{I|L}Y{M(Oxidation (M))|F}[AG]K{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YE{I|L}{I|L}Y;[Y{I|L}]NKQE{I|L}{I|L}Y;{I|L}{I|L}YE[AG]E{I|L}{I|L}Y;[YN]{I|L}KQE{I|L}{I|L}Y;{[QV]|[N{I|L}]|[RA]|[KV]}YKQE{I|L}{I|L}Y;{I|L}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EY{I|L}{I|L}Y;{I|L}{I|L}YEQ{I|L}{I|L}[YE] 5.4085;4.8536;4.6299;4.4356;3.5905;3.532;3.5265;3.5121;3.2615;3.2498 -;-;-;-;-;-;-;-;-;- 1437 + 1 1.541 87343.0 0.5400000214576721 1983 5306 7288 SUDHL4_400M_050219_2,7291 SUDHL4_400M_050219_2,7291,ILYNIKQEY True True ILYNIKQEY 38.148477 592.32091063261 836771.5 7288.0 ENSG00000135334|ENST00000257787|AKIRIN2 6.143797238667806 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7292 38.162 800.0 94374.0 25 0 8929.9 30200 QVVLAEAI 8 131 421.7511925075163 841.4878320818326 2 421.7510864138603 MULTI CID FTMS 0 0 0 7288 104248.4453125 0.6416877736554965 16 -0.993927001953125 4 Unmodified _QVVLAEAI_ ENSG00000077782|ENST00000447712|FGFR1;ENST00000526570.5_1_8:38271148-38285795:-|nuORF;nc|ENSG00000077782|P11362-10|FGFR1;nc|ENSG00000077782|P11362-11|FGFR1;nc|ENSG00000077782|P11362-12|FGFR1;nc|ENSG00000077782|P11362-13|FGFR1;nc|ENSG00000077782|P11362-14|FGFR1;nc|ENSG00000077782|P11362-19|FGFR1;nc|ENSG00000077782|P11362-2|FGFR1;nc|ENSG00000077782|P11362-20|FGFR1;nc|ENSG00000077782|P11362-21|FGFR1;nc|ENSG00000077782|P11362-3|FGFR1;nc|ENSG00000077782|P11362-4|FGFR1;nc|ENSG00000077782|P11362-5|FGFR1;nc|ENSG00000077782|P11362-6|FGFR1;nc|ENSG00000077782|P11362-7|FGFR1;nc|ENSG00000077782|P11362-8|FGFR1;nc|ENSG00000077782|P11362-9|FGFR1 2.302733041254933 0.8103549651115762 6 T 1 8 9.2917 0.0 0.0 1.1042 0.0 0.0 319.2242345249951 418.1915682428344 737.4158027678295 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 T 1.1042 - 15 + 1 1.541 63234.7 0.949999988079071 1984 5306 7288 SUDHL4_400M_050219_2,7292 SUDHL4_400M_050219_2,7292,QVVLAEAI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7294 38.168 70.0 539570.0 25 0 83242.0 + 11816 GLNEEIARV 9 51 500.7746127772632 999.5346726213264 2 500.7747070193291 MULTI CID FTMS 0 0 0 7293 624497.25 0.2104450452105007 3 -0.0860061645507812 1 Unmodified _GLNEEIARV_ ENSG00000080986|ENST00000261597|NDC80 39.94969957227396 0.0757326808254658 6 {[VA]|[{I|L}G]}NEE{I|L}A[RV] 9 0 + 71.973 0.0 0.0 7.2006 7.2006 91.484 0.0 0.0 0.0 59.21327198560853 4.137342758552691 4.137342758552691 9.208187539523747 0 0.805462187404089 2.0 0.3807196863200844 0.4247425010840047 + + {[VA]|[{I|L}G]}NEE{I|L}A[RV];{[VA]|[{I|L}G]}GGEE{I|L}A[RV] 7.2006;6.2794 +;- + 59 + 1 1.541 35934.4 1.0 1985 5307 7293 SUDHL4_400M_050219_2,7294 SUDHL4_400M_050219_2,7294,GLNEEIARV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7295 38.171 169.0 279890.0 25 0 20992.0 + 17300 KLSDLQTQL 9 92 523.2979653394276 1044.5813777456551 2 523.2982665896416 MULTI CID FTMS 0 0 0 7293 326430.5625 0.3984457159004122 7 -0.1882972717285156 2 Unmodified _KLSDLQTQL_ ENSG00000102978|ENST00000219252|POLR2C 39.21299971606389 0.0797768173001226 6 [AG]T{I|L}T{I|L}QTQ{I|L} 10 5 + 71.595 0.0 0.0 6.854 6.854 85.811 0.0 0.0 0.0 4.344019683410636 12.962659351691528 4.344019683410636 4.344019683410636 0 0.3252574989159953 1.5228787452803376 1.0 0.7742275032520141 [AG]T{I|L}T{I|L}QTQ{I|L};{[TV]|[{I|L}S]}DK{I|L}QTQ{I|L};[AG]{I|L}TT{I|L}QTQ{I|L};[AG]T{I|L}T{I|L}QT[AG]{I|L};[QT]{I|L}T{I|L}QTQ{I|L};[AG]T{I|L}T{I|L}QAAS{I|L};{[TV]|[{I|L}S]}DK{I|L}QT[AG]{I|L};{[TV]|[{I|L}S]}DK{I|L}[AG]TQ{I|L};[AG]{I|L}TT{I|L}QT[AG]{I|L};[Q{I|L}]TT{I|L}QTQ{I|L} 6.854;6.4381;6.2544;5.9766;5.9724;5.6897;5.5566;5.5566;5.3771;5.3729 -;-;-;-;-;-;-;-;-;- 1410 1 1.541 43660.9 1.0 1986 5307 7293 SUDHL4_400M_050219_2,7295 SUDHL4_400M_050219_2,7295,KLSDLQTQL True True KLSDLQTQL 38.171135 523.298266589642 5393573.5 7293.0 ENSG00000102978|ENST00000219252|POLR2C 4.394443988800049 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7296 38.179 467.0 164080.0 25 0 17987.0 -1 0 78 632.9779627902756 1895.9120589710265 3 633.3122436404228 MULTI CID FTMS 0 0 0 7293 187059.015625 0.3803454994268977 -7 0.1998023986816406 3 6 G{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 7 -1 37.989 0.0 0.0 2.0037 0.0 0.0 1095.492176696488 0.0 1095.492176696488 0.0 11.90691362661326 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 G{M(Oxidation (M))|F}{I|L}H{I|L}{[QS]|[NT]} 2.0037 - 125 1 1.541 63263.6 1.0 1987 5307 7293 SUDHL4_400M_050219_2,7296 SUDHL4_400M_050219_2,7296, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7298 38.196 800.0 106360.0 25 0 18580.0 -1 IYYNNMEEVC 10 100 675.7699693803889 1349.5253858275778 2 675.7709838747978 MULTI CID FTMS 0 0 0 7297 125941.125 0.5656293631505462 -4 0.1494979858398437 1 Carbamidomethyl (C),Oxidation (M) _IYYNNM(Oxidation (M))EEVC(Carbamidomethyl (C))_ ENSG00000184743|ENST00000398868|ATL3 13.90604991867851 0.6142120002215601 6 [Y{I|L}]EY 4 -1 43.188 0.0 0.0 3.2002 0.0 0.0 0.0 778.2509859674436 778.2509859674436 9.24279286061882 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 [Y{I|L}]EY 3.2002 - 199 + 1 1.541 68981.0 0.5 1988 5308 7297 SUDHL4_400M_050219_2,7298 SUDHL4_400M_050219_2,7298,IYYNNMEEVC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7299 38.21 800.0 125330.0 25 0 12043.0 + 17765 KQFEGTVEI 9 130 525.7772873043072 1049.5400216754142 2 525.7771484255791 MULTI CID FTMS 0 0 0 7297 118454.2578125 0.5207051286938477 4 -0.1138153076171875 2 Unmodified _KQFEGTVEI_ ENSG00000139618|ENST00000380152|BRCA2 51.629811660486645 0.0367964933207742 6 C(Carbamidomethyl (C))TVE{I|L} 5 5 49.553 0.0 0.0 4.7214 0.0 0.0 429.24547011543126 0.0 429.24547011543126 0.0 31.171597200580823 0.0 0.0 0 0.7742275032520141 0.0 0.9247425010840048 0.0 C(Carbamidomethyl (C))TVE{I|L} 4.7214 - 654 1 1.541 79825.7 0.5400000214576721 1989 5308 7297 SUDHL4_400M_050219_2,7299 SUDHL4_400M_050219_2,7299,KQFEGTVEI True True KQFEGTVEI 38.209631 525.777148425579 1487731.0 7297.0 ENSG00000139618|ENST00000380152|BRCA2 2.9437519709269204 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7300 38.223 800.0 147210.0 25 0 26529.0 -1 0 124 548.3284022337491 547.321125767149 1 548.3265869021416 MULTI CID FTMS 0 0 0 7297 104357.734375 0.1001033903373574 -7 0.212860107421875 3 6 Y 1 -1 12.474 0.0 0.0 2.2791 0.0 0.0 366.2471644407803 0.0 366.2471644407803 0.0 1.8783180698044253 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 2.2791 - 44 + 1 1.541 101899.3 0.5199999809265137 1990 5308 7297 SUDHL4_400M_050219_2,7300 SUDHL4_400M_050219_2,7300, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7302 38.234 466.0 170970.0 25 0 35956.0 -1 0 87 531.3013664602555 530.2940899936555 1 531.3018676638603 MULTI CID FTMS 0 0 0 7301 257785.203125 0.2193261210559525 -5 0.1935462951660156 1 6 V 1 -1 10.596 0.0 0.0 1.9981 0.0 0.0 413.214833867482 0.0 413.214833867482 0.0 -0.117405479247612 -0.117405479247612 0.0 0 0.0 0.0 0.0 0.0 V 1.9981 - 16 + 1 1.541 78898.3 1.0 1991 5309 7301 SUDHL4_400M_050219_2,7302 SUDHL4_400M_050219_2,7302, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7303 38.243 493.0 168330.0 25 0 15103.0 42810 VVKRALNICE 10 131 382.2211144423048 0 382.2204467654228 PEAK CID FTMS 0 0 0 7301 104595.2734375 0.6272921623637868 -3 0.1116371154785156 2 Unmodified _VVKRALNICE_ ENST00000447858.1_1_6:6587295-6587394:-|nuORF 1.9063754702782607 0.3961065659209837 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.541 69963.9 1.0 1992 5309 7301 SUDHL4_400M_050219_2,7303 SUDHL4_400M_050219_2,7303,VVKRALNICE False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7304 38.248 290.0 170540.0 25 0 10130.0 + 31876 RTLDKVLEV 9 98 536.8224468392777 1071.6303407453554 2 536.8218871951103 MULTI CID FTMS 0 0 0 7301 108068.078125 1.0 0 0.0 3 Unmodified _RTLDKVLEV_ ENSG00000080608|ENST00000397885|PUM3;ENST00000469168.1_1_9:2828673-2829902:-|nuORF 15.248480904072842 0.4239247793462406 6 [{M(Oxidation (M))|F}V]{I|L}VKEQP{I|L} 9 7 + 38.251 0.0 0.0 3.5694 3.5694 77.246 0.0 0.0 0.0 25.56997928428938 10.225954877192851 10.225954877192851 6.4609593222964286 0 0.0 0.0 0.3807196863200844 0.0 [{M(Oxidation (M))|F}V]{I|L}VKEQP{I|L};{NN|[MP]|[D{I|L}]|[EV]}KEKV{I|L}D{I|L};{NN|[MP]|[D{I|L}]|[EV]}RTKV{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}VKE[AG]P{I|L};[{M(Oxidation (M))|F}V]{I|L}VKDRPV;[{I|L}T]RDKV{I|L}D{I|L};[VS][W{I|L}]KV{I|L}D{I|L};[VS]{[VA]|[{I|L}G]}EKV{I|L}D{I|L};[{M(Oxidation (M))|F}V]{I|L}VKEAAPV;{[ET]|[MV]}[RV]KV{I|L}D{I|L} 3.5694;2.9665;2.8375;2.7102;2.5585;2.4111;2.1761;1.9429;1.747;1.6143 -;-;-;-;-;-;-;-;-;- 519 + 1 1.541 46424.9 1.0 1993 5309 7301 SUDHL4_400M_050219_2,7304 SUDHL4_400M_050219_2,7304,RTLDKVLEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7307 38.266 657.0 179550.0 25 0 15824.0 + + 15941 KAWEPSGSPL 10 144 536.2774307214468 1070.5403085096934 2 536.2763549685478 MULTI CID FTMS 0 0 0 7306 96287.6484375 0.9775329102291972 1 -0.040863037109375 1 Unmodified _ITAGGEGAWPL_ ENST00000424374.5_2_3:69061521-69061665:-|nuORF 24.020572477871973 0.5281922720044371 6 {M(Oxidation (M))|F}{I|L}VKEQP{I|L} 8 -1 33.709 0.0 0.0 3.1488 0.0 0.0 97.97985693249582 0.0 97.97985693249582 0.0 19.729881656167123 0.0 0.0 0 0.5 0.0 0.5 0.0 {M(Oxidation (M))|F}{I|L}VKEQP{I|L} 3.1488 - 1547 + 1 1.541 98058.2 1.0 1994 5311 7306 SUDHL4_400M_050219_2,7307 SUDHL4_400M_050219_2,7307,ITAGGEGAWPL False False KAWEPSGSPL 38.266362 536.276354968548 607919.3125 7306.0 ENST00000424374.5_2_3:69061521-69061665:-|nuORF 0.7863804896672567 2.0 False 10.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7308 38.279 755.0 171740.0 25 0 20727.0 27215 PGKWPALA 8 131 420.241404944863 838.468256956526 2 420.7437011599541 MULTI CID FTMS 0 0 0 7306 157988.828125 0.6816944216773659 -3 0.0729522705078125 2 Unmodified _PGKWPALA_ ENSG00000151025|ENST00000376351|GPR158 2.577480529830294 0.808687252328423 6 {M(Oxidation (M))|F} 1 8 8.7724 0.0 0.0 1.0462 0.0 0.0 673.3891534182433 0.0 673.3891534182433 0.0 8.059099143085591 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0462 - 10 + 1 1.541 106059.8 1.0 1995 5311 7306 SUDHL4_400M_050219_2,7308 SUDHL4_400M_050219_2,7308,PGKWPALA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7309 38.293 800.0 93478.0 25 0 10656.0 20660 LLQKMVAQ 8 107 465.7777117171999 929.5408705011996 2 465.7777282595634 MULTI CID FTMS 0 0 0 7306 86857.015625 1.0 0 0.0 3 Unmodified _LLQKMVAQ_ ENSG00000167094|ENST00000373289|TTC16;ENST00000488285.1_1_9:130482605-130486777:+|nuORF;nc|ENSG00000167094|Q8NEE8-2|TTC16 5.230669730166228 0.792582437072536 6 SA[QA] 4 6 16.198 0.0 0.0 1.7426 0.0 0.0 554.3541126935562 0.0 554.3541126935562 0.0 4.777904301057934 0.0 0.0 0 0.0 0.0 0.0 0.0 SA[QA] 1.7426 - 46 1 1.541 64693.2 0.9200000166893004 1996 5311 7306 SUDHL4_400M_050219_2,7309 SUDHL4_400M_050219_2,7309,LLQKMVAQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7311 38.302 349.0 177400.0 25 0 24195.0 + 40691 VLFPPPML 8 84 457.2644247402373 912.5142965472744 2 457.2637206912041 MULTI CID FTMS 0 0 0 7310 144543.578125 0.8959860536410639 -3 0.0697669982910156 1 Unmodified _VLFPPPML_ REV__ENSG00000146247|ENST00000275034|PHIP;REV__ENSG00000165288|ENST00000373275|BRWD3;REV__ENSG00000185658|ENST00000342449|BRWD1;REV__nc|ENSG00000165288|Q6RI45-2|BRWD3;REV__nc|ENSG00000165288|Q6RI45-3|BRWD3;REV__nc|ENSG00000165288|Q6RI45-4|BRWD3;REV__nc|ENSG00000165288|Q6RI45-5|BRWD3;REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1;REV__nc|ENSG00000185658|Q9NSI6|BRWD1 2.889219685676258 0.8067950007271085 6 {I|L} 1 -1 10.278 0.0 0.0 1.1263 0.0 0.0 781.4197968908277 0.0 781.4197968908277 0.0 6.29818655252878 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1263 + + 9 + 1 1.541 51532.1 1.0 1997 5312 7310 SUDHL4_400M_050219_2,7311 SUDHL4_400M_050219_2,7311,VLFPPPML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7312 38.307 262.0 244110.0 25 0 18032.0 42482 VTIDAIREV 9 89 508.29307174157657 1014.5715905499532 2 508.2932311892509 MULTI CID FTMS 0 0 0 7310 198909.40625 0.2668258597567089 -3 0.0697669982910156 2 Unmodified _VTIDAIREV_ ENSG00000152818|ENST00000367545|UTRN;nc|ENSG00000152818|P46939-2|UTRN 30.63653989081413 0.1413794767160703 6 {[QN]|[E{I|L}]|[KN]}[RK]{I|L}EEV 8 5 + 47.413 0.0 0.0 4.6732 4.6732 88.449 0.0 0.0 0.0 7.732646631054152 36.444021793654855 7.732646631054152 47.41312192373542 0 0.7742275032520141 0.8239087409443188 0.3807196863200844 0.0 {[QN]|[E{I|L}]|[KN]}[RK]{I|L}EEV 4.6732 - 94 1 1.541 55014.7 1.0 1998 5312 7310 SUDHL4_400M_050219_2,7312 SUDHL4_400M_050219_2,7312,VTIDAIREV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7313 38.316 536.0 253010.0 25 0 29521.0 + 26558 NVKLFILHR 9 132 380.5727852172844 1138.6965262520532 3 380.5731078982353 MULTI CID FTMS 0 0 0 7310 198331.359375 1.0 0 0.0 3 Unmodified _NVKLFILHR_ REV__ENST00000585421.5_1_17:76850481-76850583:-|nuORF 10.150570793230772 0.5619192000662246 6 N{I|L}{I|L}{I|L}HR 6 -1 52.568 0.0 0.0 4.6165 0.0 0.0 374.2324892420907 0.0 374.2324892420907 0.0 28.61555346200056 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.2614393726401688 N{I|L}{I|L}{I|L}HR 4.6165 - 162 + 1 1.541 108824.8 1.0 1999 5312 7310 SUDHL4_400M_050219_2,7313 SUDHL4_400M_050219_2,7313,NVKLFILHR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7314 38.325 508.0 217330.0 25 0 25929.0 + 9502 FLDPNNIPKA 10 100 564.8061201432357 1127.597687353271 2 564.8055908083916 MULTI CID FTMS 0 0 0 7310 128504.53125 0.5069043559940682 -2 0.0449295043945312 4 Unmodified _FLDPNNIPKA_ ENSG00000159063|ENST00000299626|ALG8;ENST00000532552.2_1_11:77817934-77820625:-|nuORF;nc|ENSG00000159063|Q9BVK2-2|ALG8 49.52724829834842 0.0829255630816734 6 {M(Oxidation (M))|F}{I|L}DPNN{I|L}P[KA] 10 0 + 66.005 0.0 0.0 5.8536 5.8536 86.949 0.0 0.0 0.0 40.07007180900061 1.3464343345171417 1.3464343345171417 9.164539485499256 0 1.7302046884880935 0.0 0.0 0.6307196863200843 + + {M(Oxidation (M))|F}{I|L}DPNN{I|L}P[KA];{M(Oxidation (M))|F}{I|L}DPGGN{I|L}P[KA];{M(Oxidation (M))|F}{I|L}DPNGG{I|L}P[KA];{M(Oxidation (M))|F}{I|L}DPGGGG{I|L}P[KA];{M(Oxidation (M))|F}{I|L}YYN{I|L}P[KA];{M(Oxidation (M))|F}{I|L}[R{M(Oxidation (M))|F}]C{M(Oxidation (M))|F}P[KA];{[QV]|[N{I|L}]|[RA]|[KV]}[NP]D[WK]{I|L}E;{M(Oxidation (M))|F}{I|L}YYGG{I|L}P[KA];{M(Oxidation (M))|F}{I|L}[WR]{I|L}[KC]Y;{M(Oxidation (M))|F}{I|L}[WR]S[HS][VP] 5.8536;5.0408;5.0408;4.2313;3.435;2.8003;2.6285;2.6183;2.2715;1.8479 +;-;-;-;-;-;-;-;-;- + 580 + 1 1.541 86416.2 1.0 2000 5312 7310 SUDHL4_400M_050219_2,7314 SUDHL4_400M_050219_2,7314,FLDPNNIPKA True True FLDPNNIPKA 38.325293 564.805590808392 4409010.0 7310.0 ENSG00000159063|ENST00000299626|ALG8;;ENST00000532552.2_1_11:77817934-77820625:-|nuORF;;nc|ENSG00000159063|Q9BVK2-2|ALG8 7.544376532236735 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7315 38.329 195.0 272420.0 25 0 21684.0 3558 CYQLFSFY 8 96 535.7357635653808 1069.4569741975615 2 535.7357055544853 MULTI CID FTMS 0 0 0 7310 110116.7421875 0.3612403642363263 -2 0.0449295043945312 5 Unmodified _CYQLFSFY_ ENSG00000163322|ENST00000321945|ABRAXAS1 9.347437153973935 0.7675937258251505 6 Y 1 7 15.485 0.0 0.0 1.4479 0.0 0.0 888.3830281299819 0.0 888.3830281299819 0.0 2.345828311578437 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.4479 + + 165 + 1 1.541 48088.8 1.0 2001 5312 7310 SUDHL4_400M_050219_2,7315 SUDHL4_400M_050219_2,7315,CYQLFSFY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7316 38.34 634.0 118120.0 25 0 10169.0 + 38967 TVPNTTSAL 9 112 452.2433106546954 902.4720683761908 2 452.2429992556572 MULTI CID FTMS 0 0 0 7310 101160.3046875 0.39347025395378 -3 0.0697669982910156 6 Unmodified _TVPNTTSAL_ ENST00000584680.1_1_18:26232566-26232674:+|nuORF 11.640296217721598 0.521594087909532 6 A{I|L} 2 7 16.454 0.0 0.0 1.8232 0.0 0.0 700.340474603533 0.0 700.340474603533 0.0 7.245462655597095 0.0 0.0 0 0.0 0.0 0.0 0.0 + A{I|L} 1.8232 + + 78 + 1 1.541 62087.2 1.0 2002 5312 7310 SUDHL4_400M_050219_2,7316 SUDHL4_400M_050219_2,7316,TVPNTTSAL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7318 38.346 118.0 363200.0 25 0 48727.0 39493 VARRERAV 8 65 478.7924189320953 955.5702849309904 2 478.7924072146416 MULTI CID FTMS 0 0 0 7317 430449.75 0.383144140320114 4 -0.430816650390625 1 Unmodified _VARRERAV_ ENSG00000164403|ENST00000378679|SHROOM1;nc|ENSG00000164403|Q2M3G4-2|SHROOM1 14.581692164780916 0.6954967302934248 6 {[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}K{I|L}VAV 9 6 + 49.543 0.0 0.0 5.1846 5.1846 90.376 0.0 0.0 0.0 9.009461452434238 34.05841552005654 9.009461452434238 49.54296558509682 0 0.8182503180159344 0.0 0.0 0.4247425010840047 {[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}K{I|L}VAV 5.1846 - 32 1 1.541 38317.1 1.0 2003 5313 7317 SUDHL4_400M_050219_2,7318 SUDHL4_400M_050219_2,7318,VARRERAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7319 38.348 87.0 500150.0 25 0 43900.0 45695 YWQNHPEL 8 70 543.7535564877556 1085.4925600423112 2 543.7530395388603 MULTI CID FTMS 0 0 0 7317 259178.265625 0.26121627500257 6 -0.61468505859375 2 Unmodified _YWQNHPEL_ ENSG00000119203|ENST00000238112|CPSF3 32.30548876998284 0.3644845974844379 6 YWQ[KT]Q 6 5 50.684 0.0 0.0 4.6692 0.0 0.0 0.0 248.07879053287343 248.07879053287343 43.69432069869495 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.3807196863200844 0.7887254899964358 YWQ[KT]Q 4.6692 - 140 + 1 1.541 40792.9 1.0 2004 5313 7317 SUDHL4_400M_050219_2,7319 SUDHL4_400M_050219_2,7319,YWQNHPEL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7320 38.351 103.0 369160.0 25 0 118980.0 -1 0 45 412.228088019318 411.220811552718 1 412.2307006716728 MULTI CID FTMS 0 0 0 7317 314835.1875 0.9153432139787204 -1 0.0468826293945312 3 6 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 1.3337 0.0 0.0 70.0373226384586 191.09273706607652 261.1300597045352 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3337 - 1 + 1 1.541 37679.0 1.0 2005 5313 7317 SUDHL4_400M_050219_2,7320 SUDHL4_400M_050219_2,7320, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7322 38.367 800.0 140200.0 25 0 17315.0 -1 0 74 948.9624659106912 1895.910378888182 2 948.9635497927666 MULTI CID FTMS 0 0 0 7321 110346.859375 0.8647356251242824 -1 0.0104789733886718 1 6 H{I|L}P 3 -1 49.57 0.0 0.0 2.6146 0.0 0.0 0.0 1545.6880587213502 1545.6880587213502 36.97210508875087 0.0 0.0 0.0 0 0.7887254899964358 1.6989700043360187 0.0 0.0 H{I|L}P 2.6146 - 85 + 1 1.541 82791.7 0.4000000059604645 2006 5314 7321 SUDHL4_400M_050219_2,7322 SUDHL4_400M_050219_2,7322, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7323 38.373 302.0 181250.0 25 0 20987.0 42550 VTPAFPAGLGV 11 85 514.7907881119181 1027.567023290636 2 514.7916747927666 MULTI CID FTMS 0 0 0 7321 114722.3203125 1.0 0 0.0 2 Unmodified _VTPAFPAGLGV_ ENST00000504435.1_1_4:887824-888280:-|nuORF 22.736283301280096 0.5583477779825423 6 {[TV]|[{I|L}S]}D[TP]QV{I|L}GV 10 5 + 59.87 0.0 0.0 5.8264 5.8264 86.853 0.0 0.0 0.0 11.42667503568731 33.72608801015147 11.42667503568731 9.164539485499256 0 1.3494850021680094 1.3979400086720375 0.0 0.0 {[TV]|[{I|L}S]}D[TP]QV{I|L}GV;{[TV]|[{I|L}S]}D[TP][AG]V{I|L}GV;[VG][QP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GV;{[VA]|[{I|L}G]}[NP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{I|L}GV;{[TV]|[{I|L}S]}D[TP]Q[R{I|L}]V;{[TV]|[{I|L}S]}DVV[QA]{I|L}[PS];{[TV]|[{I|L}S]}D[TP][KA]{I|L}[PS];{[TV]|[{I|L}S]}DVVRR[PS] 5.8264;4.9345;4.1536;3.6241;2.759;1.4495;1.2769;1.1068 -;-;-;-;-;-;-;- 173 1 1.541 48102.5 1.0 2007 5314 7321 SUDHL4_400M_050219_2,7323 SUDHL4_400M_050219_2,7323,VTPAFPAGLGV False True RLEDQVIGV 38.372514 514.791674792767 1032690.9375 7321.0 nc|ENSG00000060749|Q2KHR3-2|QSER1;;ENSG00000060749|ENST00000650167|QSER1;;nc|ENSG00000060749|Q2KHR3|QSER1 4.968919436136882 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7324 38.375 96.0 587440.0 25 0 70294.0 + 9475 FLDEPTNHL 9 82 543.2670185582293 0 543.2671996951103 PEAK CID FTMS 0 0 0 7321 277771.59375 0.7320823232088212 -2 0.0573616027832031 3 Unmodified _FLDEPTNHL_ ENSG00000033050|ENST00000287844|ABCF2;ENST00000465687.1_1_3:88367908-88368169:+|nuORF;nc|ENSG00000285292|Q9UG63-2|ABCF2 56.17704186161178 0.0208571546621878 6 {I|L}D{M(Oxidation (M))|F}{I|L}QW 6 7 28.237 0.0 0.0 2.6036 0.0 0.0 147.0736966850148 132.0456484430297 279.11934512804453 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.4247425010840047 {I|L}D{M(Oxidation (M))|F}{I|L}QW 2.6036 - 227 + 1 1.541 47557.6 1.0 2008 5314 7321 SUDHL4_400M_050219_2,7324 SUDHL4_400M_050219_2,7324,FLDEPTNHL True True FLDEPTNHL 38.374607 543.26719969511 8319554.0 7321.0 ENSG00000033050|ENST00000287844|ABCF2;;nc|ENSG00000285292|Q9UG63-2|ABCF2;;ENST00000465687.1_1_3:88367908-88368169:+|nuORF 6.3147861162821455 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7326 38.38 119.0 401580.0 25 0 59776.0 -1 LHLAVMLG 8 84 435.25071808231087 868.4868832314218 2 435.2509338259697 MULTI CID FTMS 0 0 0 7325 312338.34375 0.728016012404821 -3 0.0813751220703125 1 Oxidation (M) _LHLAVM(Oxidation (M))LG_ ENSG00000118454|ENST00000370944|ANKRD13C;nc|ENSG00000118454|Q8N6S4-2|ANKRD13C 0.7936320650641473 0.8195151834710337 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.541 45619.0 1.0 2009 5315 7325 SUDHL4_400M_050219_2,7326 SUDHL4_400M_050219_2,7326,LHLAVMLG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7327 38.386 332.0 228220.0 25 0 24107.0 + 18239 KVIDEIYRV 9 87 567.8295154136842 1133.6444778941684 2 567.8296386599541 MULTI CID FTMS 0 0 0 7325 88360.65625 0.7434945498892729 1 -0.2379035949707031 2 Unmodified _KVIDEIYRV_ ENSG00000143756|ENST00000366862|FBXO28 32.037481411007896 0.1235546156350648 6 KV{I|L}DE{I|L}Y[RV] 9 0 + 54.804 0.0 0.0 4.8343 4.8343 75.482 0.0 0.0 0.0 3.0102999566398125 1.249387366082999 1.249387366082999 1.249387366082999 0 1.274227503252014 0.0 0.0 0.0 + + KV{I|L}DE{I|L}Y[RV];KV{I|L}DE{I|L}[RV]Y;VK{I|L}DE{I|L}Y[RV];VK{I|L}DE{I|L}[RV]Y;KVVEE{I|L}Y[RV];KVVEE{I|L}[RV]Y;VKVEE{I|L}Y[RV];VKVEE{I|L}[RV]Y 4.8343;4.7241;4.5688;4.4586;4.4146;4.3044;4.1491;4.0389 +;-;-;-;-;-;-;- + 173 + 1 1.541 61773.3 1.0 2010 5315 7325 SUDHL4_400M_050219_2,7327 SUDHL4_400M_050219_2,7327,KVIDEIYRV True True KVIDEIYRV 38.38564 567.829638659954 325070.53125 7325.0 ENSG00000143756|ENST00000366862|FBXO28 3.4758310317993164 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7328 38.39 257.0 234970.0 25 0 60339.0 + 20716 LLSAEPVPA 9 88 448.7580488585336 895.5015447838672 2 448.7581054568291 MULTI CID FTMS 0 0 0 7325 1278626.875 1.0 0 0.0 3 Unmodified _LLSAEPVPA_ ENSG00000007312|ENST00000006750|CD79B;ENST00000558969.1_1_17:62008689-62009627:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B 18.13498045792455 0.3457906370836843 6 [VP]{I|L}G 4 7 20.942 0.0 0.0 2.3386 0.0 0.0 0.0 526.2519469657609 526.2519469657609 -0.3615050083648263 0.0 -0.3615050083648263 0.0 0 0.0 1.5228787452803376 0.0 0.0 [VP]{I|L}G 2.3386 - 107 1 1.541 51405.1 1.0 2011 5315 7325 SUDHL4_400M_050219_2,7328 SUDHL4_400M_050219_2,7328,LLSAEPVPA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7329 38.399 473.0 225690.0 25 0 22634.0 -1 LLGKIMVK 8 95 459.29669861838914 0 459.7488586306572 PEAK CID FTMS 0 0 0 7325 12544.5458984375 0.6946861353342797 4 -0.5801925659179688 4 Oxidation (M) _LLGKIM(Oxidation (M))VK_ ENST00000374466.3_1_10:43650697-43650823:+|nuORF 2.889219685676258 0.5898224805723975 6 {I|L}SY 3 -1 11.198 0.0 0.0 1.2217 0.0 0.0 112.18042008658456 438.2036532037719 550.3840732903565 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}SY 1.2217 - 42 + 1 1.541 86457.5 1.0 2012 5315 7325 SUDHL4_400M_050219_2,7329 SUDHL4_400M_050219_2,7329,LLGKIMVK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7330 38.409 588.0 84984.0 25 0 7317.6 -1 VTAEMCCY 8 87 468.17101793219547 0 467.7316467165947 PEAK CID FTMS 0 0 0 7325 23339.154296875 0.4141863967325516 -1 0.0240135192871093 5 Oxidation (M) _VTAEM(Oxidation (M))CCY_ ENSG00000144233|ENST00000272647|AMMECR1L 2.577480529830294 0.5910327097116076 6 {I|L} 1 -1 3.4949 0.0 0.0 0.37405 0.0 0.0 736.1539122298223 82.06678186588124 818.2206940957035 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.37405 - 8 + 1 1.541 43875.8 1.0 2013 5315 7325 SUDHL4_400M_050219_2,7330 SUDHL4_400M_050219_2,7330,VTAEMCCY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7331 38.421 682.0 117040.0 25 0 6821.4 1241 AIKEKEIP 8 120 464.2792106101356 0 464.2791625857353 PEAK CID FTMS 0 0 0 7325 412982.53125 1.0 0 0.0 6 Unmodified _AIKEKEIP_ ENSG00000170855|ENST00000546954|TRIAP1 9.347437153973935 0.5488964601725408 6 A 1 7 6.9897 0.0 0.0 0.75438 0.0 0.0 770.4174930202728 82.06682764224843 852.4843206625212 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.75438 + + 28 + 1 1.541 67050.0 1.0 2014 5315 7325 SUDHL4_400M_050219_2,7331 SUDHL4_400M_050219_2,7331,AIKEKEIP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7332 38.433 719.0 103840.0 25 0 19313.0 + -1 GSGAESMI 8 118 384.16479853776127 0 383.8862182497978 PEAK CID FTMS 0 0 0 7325 29349.671875 1.0 0 0.0 7 Oxidation (M) _GSGAESM(Oxidation (M))I_ REV__ENSG00000213445|ENST00000534313|SIPA1 2.577480529830294 0.5910327097116076 6 C 1 -1 5.4846 0.0 0.0 0.7157 0.0 0.0 145.53240361673505 514.7539156549436 660.2863192716786 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.7157 - 4 + 1 1.541 64807.0 1.0 2015 5315 7325 SUDHL4_400M_050219_2,7332 SUDHL4_400M_050219_2,7332,GSGAESMI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7333 38.447 787.0 52611.0 25 0 4135.1 -1 0 75 874.9054751466646 1747.796397360129 2 874.9075805544853 MULTI CID FTMS 0 0 0 7325 383353.90625 1.0 0 0.0 8 6 [NP]S{I|L}GPH 7 -1 23.721 0.0 0.0 1.3572 0.0 0.0 0.0 1042.419602276398 1042.419602276398 10.956881915617808 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3494850021680094 [NP]S{I|L}GPH 1.3572 - 226 1 1.541 32929.0 1.0 2016 5315 7325 SUDHL4_400M_050219_2,7333 SUDHL4_400M_050219_2,7333, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7334 38.462 800.0 106840.0 25 0 8291.4 + 40211 VGRGKTVA 8 131 394.2421905774128 0 394.2413513064384 PEAK CID FTMS 0 0 0 7325 363124.09375 1.0 0 0.0 9 Unmodified _VGRGKTVA_ REV__ENSG00000140986|ENST00000268661|RPL3L 0.7936320650641473 0.5979579398327216 6 E 1 -1 8.5392 0.0 0.0 1.0858 0.0 0.0 264.21538593822555 390.1919164790344 654.4073024172599 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 E 1.0858 - 9 + 1 1.541 69148.0 1.0 2017 5315 7325 SUDHL4_400M_050219_2,7334 SUDHL4_400M_050219_2,7334,VGRGKTVA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7335 38.476 800.0 78265.0 25 0 5185.9 + 23193 LSSDPKIQF 9 116 517.7811917519471 1033.547830570694 2 517.7830688357353 MULTI CID FTMS 0 0 0 7325 309947.5 1.0 0 0.0 10 Unmodified _LSSDPKIQF_ REV__ENSG00000220201|ENST00000707000|ZGLP1;REV__nc|ENSG00000220201|P0C6A0-1|ZGLP1 15.847184025352805 0.4077185912009129 6 TV 2 -1 15.815 0.0 0.0 1.5302 0.0 0.0 815.4204482238175 0.0 815.4204482238175 0.0 1.2109228667371497 0.0 0.0 0 0.3807196863200844 0.0 0.25 0.0 TV 1.5302 - 103 + 1 1.541 52810.9 0.8899999856948853 2018 5315 7325 SUDHL4_400M_050219_2,7335 SUDHL4_400M_050219_2,7335,LSSDPKIQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7336 38.491 800.0 74284.0 25 0 4069.0 + 23183 LSRRASHY 8 104 495.2681441745789 0 495.2673217654228 PEAK CID FTMS 0 0 0 7325 219272.84375 1.0 0 0.0 11 Unmodified _LSRRASHY_ REV__ENSG00000111012|ENST00000228606|CYP27B1;REV__ENST00000547344.5_1_12:58159017-58160836:-|nuORF 8.593279151180031 0.5573742999696857 6 S 1 -1 8.5392 0.0 0.0 0.86383 0.0 0.0 494.24882999779214 404.208127007298 898.4569570050901 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 S 0.86383 + + 50 + 1 1.541 49771.4 0.7099999785423279 2019 5315 7325 SUDHL4_400M_050219_2,7336 SUDHL4_400M_050219_2,7336,LSRRASHY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7337 38.505 800.0 60935.0 25 0 3307.9 16223 IVLRNGTEAF 10 94 560.3105956912041 0 560.3105956912041 PEAK CID FTMS 0 0 0 -1 0 12 Unmodified _IVLRNGTEAF_ ENSG00000138760|ENST00000264896|SCARB2;nc|ENSG00000138760|Q14108-2|SCARB2 13.90604991867851 0.345182617568752 6 {I|L}DH 3 9 13.188 0.0 0.0 1.1789 0.0 0.0 212.1484917217436 538.2519014947874 750.400393216531 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {I|L}DH 1.1789 - 27 + 1 1.541 43973.6 0.6000000238418579 2020 5315 7325 SUDHL4_400M_050219_2,7337 SUDHL4_400M_050219_2,7337,IVLRNGTEAF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7338 38.516 658.0 87742.0 25 0 8081.6 + -1 TIFYLCVH 8 103 526.7663411529778 1051.5181293727555 2 527.7472411990166 MULTI CID FTMS 0 0 0 -1 0 13 Carbamidomethyl (C) _TIFYLC(Carbamidomethyl (C))VH_ REV__ENSG00000164402|ENST00000378719|SEPTIN8;REV__ENST00000371478.2_1_5:132097291-132101152:-|nuORF;REV__nc|ENSG00000164402|Q92599-2|SEPTIN8;REV__nc|ENSG00000164402|Q92599-3|SEPTIN8;REV__nc|ENSG00000164402|Q92599-4|SEPTIN8 10.183394434864962 0.7604730176254005 6 TY 2 -1 14.949 0.0 0.0 1.4216 0.0 0.0 769.4004117628951 0.0 769.4004117628951 0.0 3.57577549998069 0.0 0.0 0 0.0 0.0 0.0 0.0 TY 1.4216 - 105 + 1 1.541 52700.3 1.0 2021 5315 7325 SUDHL4_400M_050219_2,7338 SUDHL4_400M_050219_2,7338,TIFYLCVH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7339 38.531 800.0 107590.0 25 0 10418.0 -1 NCFMYTCQ 8 91 570.2025094243205 0 569.8457519412041 PEAK CID FTMS 0 0 0 7325 9994.4453125 0.0763683410538074 -1 0.0240135192871093 14 2 Carbamidomethyl (C),Oxidation (M) _NC(Carbamidomethyl (C))FM(Oxidation (M))YTC(Carbamidomethyl (C))Q_ ENST00000302538.9_1_17:908952-909069:-|nuORF 0.7936320650641473 0.5979579398327216 6 {I|L}SQP 4 -1 18.047 0.0 0.0 1.5853 0.0 0.0 161.85520087813467 548.2687471979124 710.1239480760471 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}SQP 1.5853 - 15 + 1 1.541 70359.9 0.5299999713897705 2022 5315 7325 SUDHL4_400M_050219_2,7339 SUDHL4_400M_050219_2,7339,NCFMYTCQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7340 38.545 800.0 65277.0 25 0 8790.8 -1 0 67 866.3985473513603 0 866.3985473513603 PEAK CID FTMS 0 0 0 -1 0 15 6 DW 2 -1 7.9588 0.0 0.0 0.4601 0.0 0.0 584.2639198224625 841.3976534479124 1425.661573270375 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DW 0.4601 - 213 + 1 1.541 41020.2 0.4300000071525574 2023 5315 7325 SUDHL4_400M_050219_2,7340 SUDHL4_400M_050219_2,7340, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7341 38.555 543.0 86014.0 25 0 7678.5 + 34676 TMVDRIEEV 9 82 553.8319736859085 1105.6493944386168 2 553.7977783083916 MULTI CID FTMS 0 0 0 -1 0 16 Unmodified _SPRRGRPALP_ ENSG00000073614|ENST00000399788|KDM5A;nc|ENSG00000073614|P29375-2|KDM5A 6.2057823575117 0.6979311171683138 6 [VG]HH[{I|L}T]DTE 9 10 20.947 0.0 0.0 1.8945 0.0 0.0 0.0 113.1804973041043 113.1804973041043 6.967135466634854 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 [VG]HH[{I|L}T]DTE 1.8945 - 145 1 1.541 42642.6 1.0 2024 5315 7325 SUDHL4_400M_050219_2,7341 SUDHL4_400M_050219_2,7341,SPRRGRPALP False False TMVDRIEEV 38.554796 553.797778308392 85150.9765625 7325.0 ENSG00000073614|ENST00000399788|KDM5A;;nc|ENSG00000073614|P29375-2|KDM5A 7.070998668670654 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7342 38.57 800.0 33873.0 25 0 2298.8 -1 LLCWCSLYFEW 11 46 788.8511676106199 1575.6877822880397 2 789.3533203005791 MULTI CID FTMS 0 0 0 7325 92334.265625 1.0 0 0.0 17 2 Carbamidomethyl (C) _LLC(Carbamidomethyl (C))WC(Carbamidomethyl (C))SLYFEW_ ENST00000417811.2_3_7:32763128-32763203:-|nuORF 0.3506318815782774 0.8734936314171269 6 ADQQD 5 -1 26.186 0.0 0.0 1.6619 0.0 0.0 327.1432210770791 688.2900484674436 1015.4332695445228 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 ADQQD 1.6619 - 74 + 1 1.541 25356.9 0.4300000071525574 2025 5315 7325 SUDHL4_400M_050219_2,7342 SUDHL4_400M_050219_2,7342,LLCWCSLYFEW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7343 38.584 800.0 13785.0 25 0 2047.5 -1 0 24 1191.4838966755117 0 1191.483691394329 PEAK CID FTMS 0 0 0 7325 253060.796875 1.0 0 0.0 18 6 W 1 -1 1.9897 0.0 0.0 0.083567 0.0 0.0 1047.381903603173 1144.4357393854127 2191.8176429885857 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.083567 - 1 + 1 1.541 18340.1 0.6399999856948853 2026 5315 7325 SUDHL4_400M_050219_2,7343 SUDHL4_400M_050219_2,7343, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7344 38.598 800.0 80676.0 25 0 5867.0 + + -1 AVIEHLERL 9 100 540.7550371143898 0 540.7552978396416 PEAK CID FTMS 0 0 0 7325 227972.53125 1.0 0 0.0 19 Carbamidomethyl (C) _GLLDC(Carbamidomethyl (C))SSCLL_ ENSG00000257218|ENST00000551765|GATC 10.823927491677226 0.3685635357628707 6 G{I|L}EH{I|L}E 6 -1 26.476 0.0 0.0 2.4526 0.0 0.0 113.96688488687204 284.17182336978755 398.1387082566596 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 G{I|L}EH{I|L}E 2.4526 - 77 + 1 1.541 53610.2 0.800000011920929 2027 5315 7325 SUDHL4_400M_050219_2,7344 SUDHL4_400M_050219_2,7344,GLLDCSSCLL False False AVIEHLERL 38.597514 540.755297839642 98392.4375 7325.0 ENSG00000257218|ENST00000551765|GATC 2.4668434063593545 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7345 38.613 800.0 93763.0 25 0 12862.0 26843 PASLDLALAP 10 120 484.276417361013 0 484.2765380740166 PEAK CID FTMS 0 0 0 7325 198446.34375 1.0 0 0.0 20 Unmodified _PASLDLALAP_ ENSG00000166963|ENST00000300231|MAP1A;nc|ENSG00000166963|P78559-2|MAP1A 15.847184025352805 0.3304572136216667 6 A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GD 6 7 11.26 0.0 0.0 1.1649 0.0 0.0 279.170314114801 68.05117975406483 347.2214938688658 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}GD 1.1649 - 98 + 1 1.541 58681.1 0.699999988079071 2028 5315 7325 SUDHL4_400M_050219_2,7345 SUDHL4_400M_050219_2,7345,PASLDLALAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7347 38.618 74.0 513520.0 25 0 41736.0 22862 LSALRVEEV 9 60 508.29307174157657 1014.5715905499532 2 508.2934142947197 MULTI CID FTMS 0 0 0 7346 593267.5625 0.7958353021820936 1 -0.1584205627441406 1 Unmodified _LSALRVEEV_ ENSG00000012048|ENST00000357654|BRCA1;ENST00000493795.5_1_17:41276035-41277334:-|nuORF;nc|ENSG00000012048|P38398-2|BRCA1;nc|ENSG00000012048|P38398-3|BRCA1;nc|ENSG00000012048|P38398-5|BRCA1;nc|ENSG00000012048|P38398-6|BRCA1;nc|ENSG00000012048|P38398-7|BRCA1 21.53697664764585 0.2571576504437394 6 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}EEV 9 2 + 65.098 0.0 0.0 6.4163 6.4163 92.725 0.0 0.0 0.0 22.24301211992909 49.61303739409743 22.24301211992909 18.750612633917 0 0.4247425010840047 2.0 0.6747425010840047 0.0 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}EEV;{[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}V{I|L}TQQ;{NN|[MP]|[D{I|L}]|[EV]}[KA]V{I|L}TQQ 6.4163;4.5681;3.805 -;-;- 65 1 1.541 37492.8 1.0 2029 5316 7346 SUDHL4_400M_050219_2,7347 SUDHL4_400M_050219_2,7347,LSALRVEEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7348 38.628 567.0 124100.0 25 0 9997.7 + 38212 TPRHIIVRF 9 116 380.2313108395545 0 380.2325012087822 PEAK CID FTMS 0 0 0 7346 36464.765625 0.068079242628727 1 -0.1584205627441406 2 Unmodified _TPRHIIVRF_ nc|ENSG1000|Q9UN81|L1_ORF1 6.1918466704503565 0.3444685223463735 6 {I|L} 1 8 6.9897 0.0 0.0 0.92158 0.0 0.0 112.03041845469654 530.3072703444766 642.3376887991732 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.92158 + + 10 + 1 1.541 57980.0 1.0 2030 5316 7346 SUDHL4_400M_050219_2,7348 SUDHL4_400M_050219_2,7348,TPRHIIVRF False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 7349 38.629 16.0 3583100.0 25 0 382220.0 + 1780 ALSDHHIYL 9 80 534.7773951439915 1067.540237354783 2 534.7775756716728 MULTI CID FTMS 0 0 0 7346 3577791.75 1.0 0 0.0 3 Unmodified _ALSDHHIYL_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 53.57557251787612 0.0325303259649373 6 [{I|L}A]{[DS]|[MA]|[CV]|TT}HH{I|L}Y{I|L} 9 0 + 43.93 0.0 0.0 4.1151 4.1151 86.738 0.0 0.0 0.0 29.51763154951294 11.076980043341692 11.076980043341692 43.930081918074535 0 1.6237125054200234 2.0 0.0 0.0 + + [{I|L}A]{[DS]|[MA]|[CV]|TT}HH{I|L}Y{I|L} 4.1151 + + 137 + 1 1.541 48170.9 1.0 2031 5316 7346 SUDHL4_400M_050219_2,7349 SUDHL4_400M_050219_2,7349,ALSDHHIYL True True ALSDHHIYL 38.629201 534.777575671673 40666998.5 7346.0 nc|ENSG00000149925|P04075|ALDOA;;ENSG00000149925|ENST00000642816|ALDOA 8.029664834340414 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7350 38.631 51.0 1163800.0 25 0 87477.0 + 31141 RLNKVISEL 9 82 536.329370515678 1070.6441880981558 2 536.3295165896416 MULTI CID FTMS 0 0 0 7346 1191186.5 1.0 0 0.0 4 Unmodified _RLNKVISEL_ ENSG00000177600|ENST00000321153|RPLP2;ENST00000524867.1_1_11:810234-811767:+|nuORF 56.17704186161178 0.0281986971544335 6 {I|L}{M(Oxidation (M))|F}S{I|L}VKS 7 7 58.849 0.0 0.0 5.4966 0.0 0.0 0.0 293.1678255670532 293.1678255670532 41.50260426274315 0.0 0.0 0.0 0 0.7302046884880937 0.0 1.1861818737241734 0.0 {I|L}{M(Oxidation (M))|F}S{I|L}VKS 5.4966 - 154 + 1 1.541 52055.7 1.0 2032 5316 7346 SUDHL4_400M_050219_2,7350 SUDHL4_400M_050219_2,7350,RLNKVISEL True True RLNKVISEL 38.630547 536.3303 6727687.0 7346.0 ENSG00000177600|ENST00000321153|RPLP2;;ENST00000524867.1_1_11:810234-811767:+|nuORF 5.404977639516194 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7351 38.632 58.0 1320200.0 25 0 206980.0 + 1782 ALSDHHIYL 9 90 356.8538176235979 0 356.8538696169853 PEAK CID FTMS 0 0 0 7346 1007718.1875 1.0 0 0.0 5 Unmodified _ALSDHHIYL_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 30.22481116460888 0.1097735003385577 6 AS 2 7 15.019 0.0 0.0 2.1103 0.0 0.0 51.39781911959 499.2058199518188 550.6036390714088 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 AS 2.1103 - 107 + 1 1.541 65155.3 1.0 2033 5316 7346 SUDHL4_400M_050219_2,7351 SUDHL4_400M_050219_2,7351,ALSDHHIYL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7352 38.634 66.0 745300.0 25 0 64101.0 + 13353 HLFETISQA 9 78 523.2687677135248 1044.5229824938494 2 523.2695800662041 MULTI CID FTMS 0 0 0 7346 690694.0 1.0 0 0.0 6 Unmodified _HLFETISQA_ ENSG00000277791|ENST00000619426|PSMB3 60.38955033654506 0.025866396858536 6 [H{I|L}]{M(Oxidation (M))|F}ET{I|L}S[QA] 9 0 + 64.191 0.0 0.0 6.1455 6.1455 93.206 0.0 0.0 0.0 19.366130211356065 47.99349368937584 19.366130211356065 38.372727025023 0 0.2614393726401688 1.2218487496163564 1.3494850021680094 0.0 + + [H{I|L}]{M(Oxidation (M))|F}ET{I|L}S[QA];{[TV]|[{I|L}S]}YYT{I|L}S[QA] 6.1455;2.4718 +;- + 89 1 1.541 43995.0 1.0 2034 5316 7346 SUDHL4_400M_050219_2,7352 SUDHL4_400M_050219_2,7352,HLFETISQA True True HLFETISQA 38.633587 523.269580066204 4926843.0 7346.0 ENSG00000277791|ENST00000619426|PSMB3;;chr17:38760582-38762411|14|73.21|0.86|6.41|+|0|None,PSMB3|1 6.146600087483724 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7353 38.636 89.0 537520.0 25 0 34815.0 + -1 RAVAPTMSL 9 85 481.2599159324789 960.505278931758 2 481.2603637576103 MULTI CID FTMS 0 0 0 7346 526941.4375 1.0 0 0.0 7 Oxidation (M) _RAVAPTM(Oxidation (M))SL_ nc|ENSG00000144560|Q14135-4|VGLL4;nc|ENSG00000144560|Q14135-5|VGLL4;nc|ENSG00000144560|Q14135|VGLL4;nc|ENSG00000144560|Q14135-2|VGLL4;nc|ENSG00000144560|Q14135-6|VGLL4;ENSG00000144560|ENST00000430365|VGLL4 36.12702656103203 0.0967173616627612 6 AS{I|L} 3 -1 30.177 0.0 0.0 3.1418 0.0 0.0 671.337781228436 0.0 671.337781228436 0.0 13.764100213633764 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 AS{I|L} 3.1418 - 69 + 1 1.541 43382.9 1.0 2035 5316 7346 SUDHL4_400M_050219_2,7353 SUDHL4_400M_050219_2,7353,RAVAPTMSL False False RAVAPTMSL 38.635549 481.26036375761 4030346.75 7346.0 nc|ENSG00000144560|Q14135-4|VGLL4;;nc|ENSG00000144560|Q14135-5|VGLL4;;nc|ENSG00000144560|Q14135|VGLL4;;nc|ENSG00000144560|Q14135-2|VGLL4;;nc|ENSG00000144560|Q14135-6|VGLL4;;ENSG00000144560|ENST00000430365|VGLL4 5.329756895701091 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7354 38.638 123.0 368970.0 25 0 49967.0 + 13015 HASDRIIAL 9 65 498.2849955104488 994.5554380876976 2 498.2852966189384 MULTI CID FTMS 0 0 0 7346 400987.0 1.0 0 0.0 8 Unmodified _HASDRIIAL_ ENSG00000163931|ENST00000462138|TKT;ENST00000460343.5_1_3:53261754-53265639:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;nc|ENSG00000163931|P29401-2|TKT 30.7034409873982 0.1405282614900322 6 HA 2 7 42.959 0.0 0.0 4.3194 0.0 0.0 0.0 783.4374485986622 783.4374485986622 15.880456295278409 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + HA 4.3194 + + 18 + 1 1.541 41280.8 1.0 2036 5316 7346 SUDHL4_400M_050219_2,7354 SUDHL4_400M_050219_2,7354,HASDRIIAL False True HASDRIIAL 38.638085 498.285296618938 2704234.25 7346.0 ENST00000461139.5_1_3:53259774-53265639:-|nuORF;;nc|ENSG00000163931|P29401-2|TKT;;ENSG00000163931|ENST00000462138|TKT;;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;;ENST00000460343.5_1_3:53261754-53265639:-|nuORF 6.614950815836589 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7355 38.641 164.0 219840.0 25 0 22542.0 + + -1 GIHTGQFVY 9 70 511.2580510688591 0 511.2580139040947 PEAK CID FTMS 0 0 0 7346 247038.28125 1.0 0 0.0 9 Oxidation (M) _SM(Oxidation (M))FIVFVY_ ENST00000531767.1_1_8:146017155-146017514:-|nuORF;ENSG00000161016|ENST00000528957|RPL8;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;chr8:144790470-144791773|11|189.18|0.81|7.86|-|2|RPL8,RPL8|1 19.438996006549623 0.4285751805470146 6 V{M(Oxidation (M))|F} 2 -1 15.969 0.0 0.0 1.5648 0.0 0.0 181.07376707736825 590.2687225503773 771.3424896277456 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 V{M(Oxidation (M))|F} 1.5648 + + 33 + 1 1.541 34806.5 1.0 2037 5316 7346 SUDHL4_400M_050219_2,7355 SUDHL4_400M_050219_2,7355,SMFIVFVY False False GIHTGQFVY 38.64132 511.258013904095 1060013.125 7346.0 ENST00000531767.1_1_8:146017155-146017514:-|nuORF;;ENSG00000161016|ENST00000528957|RPL8;;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;;chr8:144790470-144791773|11|189.18|0.81|7.86|-|2|RPL8,RPL8|1 3.950457652409872 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7356 38.655 800.0 465690.0 25 0 96135.0 + 45253 YSDDIPHAL 9 175 515.7454759663692 1029.4763989995383 2 515.7457763552666 MULTI CID FTMS 0 0 0 7346 229815.703125 0.1467852971005577 -1 0.2379035949707031 10 Unmodified _YSDDIPHAL_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 104.79918948944588 0.0084531067040494 6 YSDD{I|L}PHA{I|L} 9 0 + 90.806 0.0 0.0 8.8206 8.8206 96.073 0.0 0.0 0.0 56.392338924636825 7.324930384796815 7.324930384796815 13.306514394273163 0 1.6990786322795233 2.0 0.805462187404089 0.0 + + YSDD{I|L}PHA{I|L};YSDD{I|L}[RV]Y;YSDD{I|L}[YR]V;YSD[{M(Oxidation (M))|F}V]{I|L}CA{I|L};YSDD{I|L}{I|L}[HA]P;YSDD[YR]V{I|L};YSDD[YR]{I|L}V;YSH[HS]{I|L}CA{I|L};YSD[{M(Oxidation (M))|F}V]{I|L}MGV;YSD[{M(Oxidation (M))|F}V]{[MG]|[TS]}V{I|L} 8.8206;7.5281;7.0137;6.5507;6.4659;6.0434;5.5646;5.5284;5.5117;5.1201 +;-;-;-;-;-;-;-;-;- + 3287 + 1 1.541 281033.6 0.7799999713897705 2038 5316 7346 SUDHL4_400M_050219_2,7356 SUDHL4_400M_050219_2,7356,YSDDIPHAL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7357 38.669 800.0 142490.0 25 0 14018.0 17491 KPGLPGDR 8 135 420.241404944863 838.468256956526 2 420.7435790896416 MULTI CID FTMS 0 0 0 7346 145786.390625 0.6290430179462408 2 -0.2821502685546875 11 Unmodified _KPGLPGDR_ ENST00000547315.5_2_14:105452460-105452724:+|nuORF 4.75600775471527 0.7954636275367004 6 {I|L} 1 7 8.3683 0.0 0.0 0.99805 0.0 0.0 707.3732690188292 0.0 707.3732690188292 0.0 -0.9285106789696638 -0.9285106789696638 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.99805 + + 10 + 1 1.541 91840.4 0.5400000214576721 2039 5316 7346 SUDHL4_400M_050219_2,7357 SUDHL4_400M_050219_2,7357,KPGLPGDR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7358 38.683 800.0 77527.0 25 0 4041.4 + -1 SRPDSILGMQF 11 107 633.8104686378042 1265.6063843424083 2 633.8110839724541 MULTI CID FTMS 0 0 0 7346 141014.65625 1.0 0 0.0 12 Oxidation (M) _SRPDSILGM(Oxidation (M))QF_ REV__ENST00000423212.1_1_1:178716132-178716684:-|nuORF 26.268140514670165 0.4754186812857754 6 [Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 10 -1 + 52.726 0.0 0.0 4.1661 4.1661 81.348 0.0 0.0 0.0 2.269987279362624 39.23139171554652 2.269987279362624 9.164539485499256 0 0.9929928190999392 0.0 0.805462187404089 1.079689690656103 [Q{I|L}]KQEQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]EQA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]KQE[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[Q{I|L}]K[AG]E[AG]A{M(Oxidation (M))|F}Q{M(Oxidation (M))|F};[NP][R{I|L}]HHA{M(Oxidation (M))|F}Q{M(Oxidation (M))|F} 4.1661;3.442;3.442;2.7207;0.76756 -;-;-;-;- 251 1 1.541 53911.9 0.6000000238418579 2040 5316 7346 SUDHL4_400M_050219_2,7358 SUDHL4_400M_050219_2,7358,SRPDSILGMQF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7359 38.697 800.0 128300.0 25 0 11306.0 -1 0 93 603.9672444161467 1808.87990384864 3 603.9680053591728 MULTI CID FTMS 0 0 0 7346 140662.140625 0.0998801333265166 -11 0.5444107055664062 13 6 N{[WT]|[RM]}{I|L}GE[C(Carbamidomethyl (C))D]{I|L}H{I|L}Q 12 -1 42.502 0.0 0.0 2.3496 0.0 0.0 324.17881972480626 0.0 324.17881972480626 0.0 9.891915987517088 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.7302046884880937 N{[WT]|[RM]}{I|L}GE[C(Carbamidomethyl (C))D]{I|L}H{I|L}Q 2.3496 - 1175 1 1.541 82160.2 0.6000000238418579 2041 5316 7346 SUDHL4_400M_050219_2,7359 SUDHL4_400M_050219_2,7359, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7360 38.712 800.0 159780.0 25 0 12278.0 + 31985 RVFPEKGYSF 10 115 615.3187054145203 1228.6228578958403 2 615.3190185427666 MULTI CID FTMS 0 0 0 7346 134803.859375 1.0 0 0.0 14 Unmodified _RVFPEKGYSF_ ENSG00000151923|ENST00000436547|TIAL1;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000151923|Q01085-2|TIAL1 64.9267550582149 0.0236624172317635 6 [RV]{M(Oxidation (M))|F}[EP]KGYS{M(Oxidation (M))|F} 10 0 + 71.205 0.0 0.0 5.7955 5.7955 91.014 0.0 0.0 0.0 12.252684618815096 46.22233127352684 12.252684618815096 20.522658805492952 0 1.7951140161145327 0.9208187539523752 0.805462187404089 0.3807196863200844 + + [RV]{M(Oxidation (M))|F}[EP]KGYS{M(Oxidation (M))|F};[YG]SK[{I|L}P][PA]YS{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}[TP][VG]GYS{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}[TP]RG[HM]E;[YG]SK[{I|L}P][R{M(Oxidation (M))|F}]D{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}C]|[YS]}GK[{I|L}P][PA]YS{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}[EP]Y[KG]S{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}[{I|L}V][NG]YD{M(Oxidation (M))|F};[EP]K[YK][PA]YS{M(Oxidation (M))|F};[RV]{M(Oxidation (M))|F}[TP][KG]YD{M(Oxidation (M))|F} 5.7955;4.1251;4.0779;3.4685;3.1181;2.8856;2.2358;2.192;2.0265;1.9843 +;-;-;-;-;-;-;-;-;- + 488 1 1.541 96320.5 0.6000000238418579 2042 5316 7346 SUDHL4_400M_050219_2,7360 SUDHL4_400M_050219_2,7360,RVFPEKGYSF True True RVFPEKGYSF 38.711924 615.319018542767 4152258.75 7346.0 nc|ENSG00000151923|Q01085-2|TIAL1;;ENSG00000151923|ENST00000436547|TIAL1;;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;;ENST00000489822.5_1_10:121336540-121356247:-|nuORF 7.31039826075236 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7361 38.726 800.0 75712.0 25 0 4725.9 -1 0 110 548.3284022337491 547.321125767149 1 550.3401367068291 MULTI CID FTMS 0 0 0 7346 118723.71875 1.0 0 0.0 15 6 {I|L} 1 -1 11.594 0.0 0.0 2.1183 0.0 0.0 416.2262141233975 0.0 416.2262141233975 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.1183 - 53 + 1 1.541 52324.1 0.5699999928474426 2043 5316 7346 SUDHL4_400M_050219_2,7361 SUDHL4_400M_050219_2,7361, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7362 38.734 408.0 204280.0 25 0 16617.0 1593 ALLGRVAVSA 10 108 478.7975668764293 955.5805808196584 2 478.7975952029228 MULTI CID FTMS 0 0 0 7346 119218.8515625 1.0 0 0.0 16 Unmodified _ALLGRVAVSA_ ENSG00000141522|ENST00000269321|ARHGDIA;nc|ENSG00000141522|P52565-2|ARHGDIA 10.799506525563784 0.666336781075408 6 {I|L}V{[SA]|[TG]} 4 6 18.561 0.0 0.0 1.9424 0.0 0.0 567.3500259283674 0.0 567.3500259283674 0.0 0.602554773050965 0.0 0.0 0 0.7134679910804405 0.0 0.0 0.0 {I|L}V{[SA]|[TG]} 1.9424 - 179 1 1.541 68316.6 1.0 2044 5316 7346 SUDHL4_400M_050219_2,7362 SUDHL4_400M_050219_2,7362,ALLGRVAVSA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7363 38.748 800.0 101300.0 25 0 9053.8 + + 43343 TLDVQIQHV 9 127 526.7663411529778 1051.5181293727555 2 526.7903320193291 MULTI CID FTMS 0 0 0 -1 0 17 Unmodified _WNEPHRTL_ ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-4|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B 16.942295170755138 0.6606234159769251 6 {NN|[MP]|[D{I|L}]|[EV]}N{I|L}APVDS 9 -1 45.356 0.0 0.0 4.3134 0.0 0.0 0.0 124.03910704509568 124.03910704509568 17.908952523819657 0.0 0.0 0.0 0 0.0 0.8239087409443188 0.6643943297944485 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}N{I|L}APVDS 4.3134 - 861 1 1.541 68181.2 0.4799999892711639 2045 5316 7346 SUDHL4_400M_050219_2,7363 SUDHL4_400M_050219_2,7363,WNEPHRTL False False TLDVQIQHV 38.748036 526.790332019329 214955.96875 7346.0 ENSG00000138182|ENST00000371728|KIF20B;;nc|ENSG00000138182|Q96Q89-4|KIF20B;;nc|ENSG00000138182|Q96Q89-2|KIF20B;;nc|ENSG00000138182|Q96Q89-3|KIF20B 7.481403986612956 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7364 38.755 358.0 163320.0 25 0 18066.0 + 25578 NFAKLHLA 8 100 457.2644247402373 912.5142965472744 2 457.2646972537041 MULTI CID FTMS 0 0 0 7346 104702.2734375 0.6490207174986745 1 -0.1584205627441406 18 Unmodified _NFAKLHLA_ REV__ENSG00000155085|ENST00000424296|AK9 5.760428011301431 0.7893668129297577 6 {[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}{I|L}HR 7 -1 + 22.695 0.0 0.0 2.4871 2.4871 81.197 0.0 0.0 0.0 11.726307269461742 11.804782212094336 11.726307269461742 16.00360206450068 0 0.0 0.0 0.0 0.0 {[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}{I|L}HR;{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}[RH]{I|L} 2.4871;0.73334 -;- 51 + 1 1.541 52229.6 1.0 2046 5316 7346 SUDHL4_400M_050219_2,7364 SUDHL4_400M_050219_2,7364,NFAKLHLA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7365 38.768 800.0 67067.0 25 0 7222.8 + 9503 FLDPNNIPKA 10 90 564.8061201432357 1127.597687353271 2 564.8063232302666 MULTI CID FTMS 0 0 0 7346 96632.78125 0.3811817160917967 2 -0.2821502685546875 19 Unmodified _FLDPNNIPKA_ ENSG00000159063|ENST00000299626|ALG8;ENST00000532552.2_1_11:77817934-77820625:-|nuORF;nc|ENSG00000159063|Q9BVK2-2|ALG8 13.042465956692816 0.6287021003332052 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 3 7 31.254 0.0 0.0 2.7717 0.0 0.0 0.0 749.394088413653 749.394088413653 19.660225703182164 0.0 0.0 0.0 0 0.9247425010840048 1.154901959985743 0.0 0.0 + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D 2.7717 + + 43 + 1 1.541 47501.9 0.4600000083446502 2047 5316 7346 SUDHL4_400M_050219_2,7365 SUDHL4_400M_050219_2,7365,FLDPNNIPKA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7366 38.771 56.0 872810.0 25 0 157690.0 + 37076 TGKGSAKA 8 83 360.2052971486252 718.3960413640505 2 360.2066833376884 MULTI CID FTMS 0 0 0 7346 149101.578125 0.1032321074246449 -2 0.2619171142578125 20 Unmodified _TGKGSAKA_ REV__ENST00000520834.1_1_8:65489507-65489756:-|nuORF 0.0 0.8243325171867699 6 M 1 -1 0.3786 0.0 0.0 0.052701 0.0 0.0 422.2686437583848 162.06122766666252 584.3298714250474 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.052701 - 1 + 1 1.541 47693.5 1.0 2048 5316 7346 SUDHL4_400M_050219_2,7366 SUDHL4_400M_050219_2,7366,TGKGSAKA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7368 38.787 709.0 176650.0 25 0 12751.0 + 9476 FLDEPTNHL 9 145 543.2670185582293 0 543.2663452029228 PEAK CID FTMS 0 0 0 7367 82678.21875 0.2179029959260084 1 -0.1237297058105468 1 Unmodified _FLDEPTNHL_ ENSG00000033050|ENST00000287844|ABCF2;ENST00000465687.1_1_3:88367908-88368169:+|nuORF;nc|ENSG00000285292|Q9UG63-2|ABCF2 65.23502041540118 0.0134875362242201 6 DEPTN 5 4 37.942 0.0 0.0 3.4985 0.0 0.0 260.1514488511792 265.1307467096313 525.2821955608105 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 1.110924374808178 0.7134679910804405 + DEPTN 3.4985 + + 112 + 1 1.541 98681.3 1.0 2049 5317 7367 SUDHL4_400M_050219_2,7368 SUDHL4_400M_050219_2,7368,FLDEPTNHL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7369 38.789 98.0 649720.0 25 0 105140.0 + 27483 PKGPGPLA 8 108 368.7198354725169 0 368.7198669314384 PEAK CID FTMS 0 0 0 7367 688923.875 1.0 0 0.0 2 Unmodified _PKGPGPLA_ REV__ENST00000519574.1_1_2:219125758-219128073:+|nuORF;REV__ENST00000566665.1_1_16:10273773-10274277:-|nuORF 0.6903765706972694 0.5983587967854751 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.541 52787.1 1.0 2050 5317 7367 SUDHL4_400M_050219_2,7369 SUDHL4_400M_050219_2,7369,PKGPGPLA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7370 38.792 109.0 525660.0 25 0 78607.0 + 12977 HAIPPTLAM 9 75 483.7571500620577 965.4997471909154 2 483.7573730349541 MULTI CID FTMS 0 0 0 7367 534453.125 0.6033042411520905 -2 0.3963241577148437 3 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 6 [{I|L}P][TP]AH{I|L}A{M(Oxidation (M))|F} 9 4 [{I|L}P][TP]AH + + 31.198 7.9622 1.2919 3.2313 3.2313 52.018 0.0 0.0 0.0 0.0 11.272955643129304 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 [{I|L}P][TP]AH{I|L}A{M(Oxidation (M))|F} 3.2313 - 166 + 1 1.541 49313.6 1.0 2051 5317 7367 SUDHL4_400M_050219_2,7370 SUDHL4_400M_050219_2,7370,HAIPPTLAM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7371 38.794 112.0 609990.0 25 0 85667.0 + 33912 SLFVSNHAY 9 92 519.2556755326531 1036.496798132106 2 519.2557861208916 MULTI CID FTMS 0 0 0 7367 481537.625 1.0 0 0.0 4 Unmodified _SLFVSNHAY_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 49.93300154707207 0.0405168250806675 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}VSNHAY 9 0 + 66.859 0.0 0.0 6.4505 6.4505 92.472 0.0 0.0 0.0 48.67155698614812 5.683147742857059 5.683147742857059 16.82258126592543 0 0.8494850021680094 2.0 0.3807196863200844 0.7614393726401688 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}VSNHAY;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}VSGGHAY;{[TV]|[{I|L}S]}[WQ][KQ]T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[WQ]{[{M(Oxidation (M))|F}D]|MM}{[QN]|[E{I|L}]|[KN]} 6.4505;4.8275;2.8121;1.5839 +;-;-;- + 228 + 1 1.541 56197.1 1.0 2052 5317 7367 SUDHL4_400M_050219_2,7371 SUDHL4_400M_050219_2,7371,SLFVSNHAY True True SLFVSNHAY 38.793888 519.255786120892 2941857.0 7367.0 nc|ENSG00000149925|P04075|ALDOA;;ENSG00000149925|ENST00000642816|ALDOA 8.460151036580404 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7372 38.797 181.0 318560.0 25 0 55470.0 -1 LHLAVMLG 8 81 435.25071808231087 868.4868832314218 2 435.2509643435478 MULTI CID FTMS 0 0 0 7367 351602.0 0.819533980107301 -1 0.1584205627441406 5 Oxidation (M) _LHLAVM(Oxidation (M))LG_ ENSG00000118454|ENST00000370944|ANKRD13C;nc|ENSG00000118454|Q8N6S4-2|ANKRD13C 0.7936320650641473 0.8195151834710337 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.541 49368.1 1.0 2053 5317 7367 SUDHL4_400M_050219_2,7372 SUDHL4_400M_050219_2,7372,LHLAVMLG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7373 38.802 230.0 219830.0 25 0 41889.0 11704 GLGKTFNY 8 79 450.23434802939073 898.4541431255815 2 450.2345153689384 MULTI CID FTMS 0 0 0 7367 238834.6875 1.0 0 0.0 6 Unmodified _GLGKTFNY_ ENST00000374619.1_1_1:23520938-23521079:-|nuORF 14.581692164780916 0.6954967302934248 6 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}G 4 5 35.49 0.0 0.0 3.9501 0.0 0.0 0.0 521.2376803033811 521.2376803033811 12.474250108400469 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}G 3.9501 - 76 + 1 1.541 44292.1 1.0 2054 5317 7367 SUDHL4_400M_050219_2,7373 SUDHL4_400M_050219_2,7373,GLGKTFNY False True GIFGKGSAY 38.801707 450.234515368938 1275644.75 7367.0 ENST00000558825.5_1_15:91337395-91358506:+|nuORF;;ENSG00000197299|ENST00000355112|BLM 3.6297064622243247 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7374 38.806 210.0 265350.0 25 0 24080.0 + 10250 FQSDTNAML 9 101 521.7289453536727 1041.4433377741452 2 521.7290527224541 MULTI CID FTMS 0 0 0 7367 225478.90625 1.0 0 0.0 7 Oxidation (M) _FQSDTNAM(Oxidation (M))L_ ENSG00000127337|ENST00000247843|YEATS4 54.773552608820026 0.0299037012502309 6 {[DA]|[EG]}[YQ]{[QS]|[NT]}A{M(Oxidation (M))|F}{I|L} 9 4 + 28.609 0.0 0.0 2.7471 2.7471 77.632 0.0 0.0 0.0 3.0753755143956667 17.77187650645299 3.0753755143956667 9.078628669707744 0 1.048455006504028 0.9208187539523752 0.6237125054200234 0.6747425010840047 {[DA]|[EG]}[YQ]{[QS]|[NT]}A{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[MD]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{[ET]|[MV]}[C(Carbamidomethyl (C))M]{M(Oxidation (M))|F}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[QS]|[NT]}A{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[MD]{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}{I|L} 2.7471;1.8753;1.5863;1.4048;0.46325;0.052936 -;-;-;-;-;- 261 1 1.541 49737.3 1.0 2055 5317 7367 SUDHL4_400M_050219_2,7374 SUDHL4_400M_050219_2,7374,FQSDTNAML True False FQSDTNAML 38.805711 521.729052722454 1599161.5 7367.0 ENSG00000127337|ENST00000247843|YEATS4 3.2776303191979728 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7375 38.812 371.0 258640.0 25 0 22755.0 + 41921 VQGPVGTDF 9 112 460.2298611213589 918.4451693095178 2 460.2300598025322 MULTI CID FTMS 0 0 0 7367 220602.5625 0.5832345961040758 -1 0.1584205627441406 8 Unmodified _VQGPVGTDF_ ENSG00000010244|ENST00000394670|ZNF207;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;nc|ENSG00000010244|O43670-2|ZNF207;nc|ENSG00000010244|O43670-3|ZNF207;nc|ENSG00000010244|O43670|ZNF207 34.10243960390752 0.1078313939113124 6 [VP]G[KA]WD{M(Oxidation (M))|F} 8 5 [VP]G[KA]W + + 21.211 3.5658 0.5586 2.3095 2.3095 50.608 0.0 0.0 0.0 0.0 6.796964746998908 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 [VP]G[KA]WD{M(Oxidation (M))|F} 2.3095 - 217 + 1 1.541 79247.3 1.0 2056 5317 7367 SUDHL4_400M_050219_2,7375 SUDHL4_400M_050219_2,7375,VQGPVGTDF True True VQGPVGTDF 38.812375 460.230059802532 2066503.25 7367.0 ENSG00000010244|ENST00000394670|ZNF207;;nc|ENSG00000010244|O43670-3|ZNF207;;nc|ENSG00000010244|O43670-2|ZNF207;;ENST00000584696.1_1_17:30693734-30695045:+|nuORF;;nc|ENSG00000010244|O43670|ZNF207 6.2685972849528 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7376 38.826 800.0 141170.0 25 0 15016.0 37345 TIYYGEQRST 10 135 609.2936802461786 1216.5728075591571 2 609.2940551638603 MULTI CID FTMS 0 0 0 7367 132330.296875 1.0 0 0.0 9 Unmodified _TIYYGEQRST_ ENSG00000127083|ENST00000375550|OMD 13.042465956692816 0.6287021003332052 6 [{I|L}T]{[C(Carbamidomethyl (C))G]|[NC]}SKAC{I|L} 9 7 37.866 0.0 0.0 3.1125 0.0 0.0 0.0 280.1305330865844 280.1305330865844 18.801722133172103 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]{[C(Carbamidomethyl (C))G]|[NC]}SKAC{I|L} 3.1125 - 931 + 1 1.541 83763.3 0.5799999833106995 2057 5317 7367 SUDHL4_400M_050219_2,7376 SUDHL4_400M_050219_2,7376,TIYYGEQRST False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7377 38.84 800.0 141760.0 25 0 8361.7 + 24634 MLPPPPLTA 9 131 476.76204410566976 951.5095352781397 2 476.7619506716728 MULTI CID FTMS 0 0 0 7367 113523.0078125 1.0 0 0.0 10 Oxidation (M) _M(Oxidation (M))LPPPPLTA_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 93.88341677533236 0.0134066622201488 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPP[{I|L}P]TA 9 0 + 55.705 0.0 0.0 5.8544 5.8544 90.954 0.0 0.0 0.0 11.725286100849525 11.725286100849525 11.725286100849525 18.317562352075768 0 2.004432191740108 2.0 1.8882104921644447 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPP[{I|L}P]TA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPP[VS]PV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPP[VS]VP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YK][{I|L}P]TA;{I|L}{I|L}{[CA]|SS}PPP{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[KS]VV{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[VS][YK]V;{I|L}{I|L}[RD]PP{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WT]|[RM]}SVS{I|L} 5.8544;3.9293;3.9143;3.6705;2.854;2.6357;2.537;2.4036;2.3879;2.2295 +;-;-;-;-;-;-;-;-;- + 463 + 1 1.541 90295.6 0.5 2058 5317 7367 SUDHL4_400M_050219_2,7377 SUDHL4_400M_050219_2,7377,MLPPPPLTA True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7378 38.851 642.0 170330.0 25 0 30192.0 + 25704 NIFSSWST 8 109 471.2203667622034 940.4261805912068 2 471.2206298708916 MULTI CID FTMS 0 0 0 7367 95760.265625 1.0 0 0.0 11 Unmodified _NIFSSWST_ REV__ENSG00000132326|ENST00000254657|PER2;REV__ENST00000491417.1_1_2:239170336-239171614:-|nuORF 13.50788311687929 0.7113601687236069 6 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[TA]ND{M(Oxidation (M))|F} 8 -1 + 30.947 0.0 0.0 3.2908 3.2908 80.535 0.0 0.0 0.0 13.015384402724589 11.827125221306634 11.827125221306634 9.262137858390812 0 0.4247425010840047 0.0 0.3054621874040891 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[TA]ND{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[TA]GGD{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[YR]ND{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[SG]AAD{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[YR]GGD{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[YQ]AAD{M(Oxidation (M))|F} 3.2908;2.3059;2.2844;2.0344;1.2922;1.0208 -;-;-;-;-;- 194 + 1 1.541 86783.3 1.0 2059 5317 7367 SUDHL4_400M_050219_2,7378 SUDHL4_400M_050219_2,7378,NIFSSWST False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7379 38.864 656.0 146220.0 25 0 20202.0 + 19177 LEEKSAPDL 9 140 501.2608579604912 1000.5071629877824 2 501.2605468630791 MULTI CID FTMS 0 0 0 7367 97269.1875 1.0 0 0.0 12 Unmodified _LEEKSAPDL_ REV__ENSG00000131037|ENST00000201647|EPS8L1;REV__nc|ENSG00000131037|Q8TE68-3|EPS8L1 19.256988751693697 0.3154191944385105 6 [{I|L}A]{M(Oxidation (M))|F} 3 -1 24.437 0.0 0.0 2.4425 0.0 0.0 0.0 666.3551119440061 666.3551119440061 1.5051499783199065 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}A]{M(Oxidation (M))|F} 2.4425 - 538 + 1 1.541 76589.8 1.0 2060 5317 7367 SUDHL4_400M_050219_2,7379 SUDHL4_400M_050219_2,7379,LEEKSAPDL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7380 38.875 644.0 112680.0 25 0 12805.0 + + 23942 YSIVGQKL 8 110 454.2624662405865 0 454.2651550173759 PEAK CID FTMS 0 0 0 7367 96675.890625 1.0 0 0.0 13 Unmodified _LVRFAKCA_ ENST00000483205.1_1_3:47551637-47555080:-|nuORF;ENST00000485029.5_1_3:47545746-47555080:-|nuORF;ENSG00000163832|ENST00000296149|ELP6;nc|ENSG00000163832|Q0PNE2-2|ELP6 2.889219685676258 0.5898224805723975 6 D 1 -1 11.479 0.0 0.0 1.2663 0.0 0.0 656.4147812587137 132.04561792545158 788.4603991841652 0.0 0.0 0.0 0.0 0 0.5 0.0 0.25 0.0 D 1.2663 - 24 + 1 1.541 59258.9 1.0 2061 5317 7367 SUDHL4_400M_050219_2,7380 SUDHL4_400M_050219_2,7380,LVRFAKCA False False YSIVGQKL 38.875329 454.265155017376 158044.828125 7367.0 ENST00000483205.1_1_3:47551637-47555080:-|nuORF;;ENST00000485029.5_1_3:47545746-47555080:-|nuORF;;ENSG00000163832|ENST00000296149|ELP6;;nc|ENSG00000163832|Q0PNE2-2|ELP6 4.794427235921224 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7381 38.889 800.0 103810.0 25 0 25413.0 -1 0 49 1178.1613466201204 3531.462210460561 3 1178.830493152142 MULTI CID FTMS 0 0 0 7367 295869.0625 1.0 0 0.0 14 6 GR 2 -1 8.5835 0.0 0.0 0.24306 0.0 0.0 2147.7559502728777 1167.5750216119752 3315.330971884853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GR 0.24306 - 6 + 1 1.541 75288.8 0.6700000166893005 2062 5317 7367 SUDHL4_400M_050219_2,7381 SUDHL4_400M_050219_2,7381, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7382 38.895 228.0 180420.0 25 0 21870.0 -1 0 82 412.228088019318 411.220811552718 1 412.2302123904228 MULTI CID FTMS 0 0 0 7367 191825.796875 0.557709075754411 3 -0.2686004638671875 15 6 E 1 -1 0.9691 0.0 0.0 0.23566 0.0 0.0 183.0733944158024 96.0823229425414 279.15571735834374 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.23566 - 3 + 1 1.541 38100.0 1.0 2063 5317 7367 SUDHL4_400M_050219_2,7382 SUDHL4_400M_050219_2,7382, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7384 38.9 86.0 560400.0 25 0 121960.0 + 45254 YSDDIPHAL 9 76 515.7454759663692 1029.4763989995383 2 515.7457153201103 MULTI CID FTMS 0 0 0 7383 488287.5 0.3118734915995031 1 -0.0601387023925781 1 Unmodified _YSDDIPHAL_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 42.09456458481378 0.0639583784996157 6 YSDD{I|L}P[HA]{I|L} 9 0 + 68.466 0.0 0.0 6.6505 6.6505 93.592 0.0 0.0 0.0 55.53395642852614 3.4678748622465605 3.4678748622465605 21.29370928348408 0 0.6861818737241735 2.0 0.0 0.0 + + YSDD{I|L}P[HA]{I|L};YSD[{M(Oxidation (M))|F}V]{I|L}{[WT]|[RM]};YSD[{M(Oxidation (M))|F}V]{I|L}{[CA]|SS}{I|L};YSD[{M(Oxidation (M))|F}V]{[WT]|[RM]}{I|L};{[TV]|[{I|L}S]}[HV]{I|L}DD[MT];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}A{I|L}[{M(Oxidation (M))|F}V]D[MT] 6.6505;4.5821;4.24;4.1956;2.2129;1.4473 +;-;-;-;-;- + 137 + 1 1.541 42621.3 1.0 2064 5318 7383 SUDHL4_400M_050219_2,7384 SUDHL4_400M_050219_2,7384,YSDDIPHAL True True YSDDIPHAL 38.900471 515.74571532011 15418417.0 7383.0 ENST00000518442.5_1_8:109247181-109261015:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 9.732497056325276 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7385 38.904 180.0 242940.0 25 0 23627.0 + 1781 ALSDHHIYL 9 87 534.7773951439915 1067.540237354783 2 534.7774536013603 MULTI CID FTMS 0 0 0 7383 144501.390625 0.0403884297136634 2 -0.1448707580566406 2 Unmodified _ALSDHHIYL_ ENSG00000149925|ENST00000642816|ALDOA;nc|ENSG00000149925|P04075|ALDOA 44.40701690623563 0.0526327925666318 6 [{M(Oxidation (M))|F}T]{NN|[MP]|[D{I|L}]|[EV]}{I|L}A{I|L}Y{I|L} 9 5 + 47.668 0.0 0.0 4.4652 4.4652 87.124 0.0 0.0 0.0 2.406812209816636 33.766734124050544 2.406812209816636 27.00318762307695 0 0.7302046884880938 0.0 0.3252574989159953 0.0 [{M(Oxidation (M))|F}T]{NN|[MP]|[D{I|L}]|[EV]}{I|L}A{I|L}Y{I|L};[{M(Oxidation (M))|F}T]{NN|[MP]|[D{I|L}]|[EV]}{I|L}Y[{I|L}A]{I|L};[HA][{M(Oxidation (M))|F}V][VG]YY{I|L} 4.4652;1.9357;1.1112 -;-;- 93 1 1.541 41072.4 1.0 2065 5318 7383 SUDHL4_400M_050219_2,7385 SUDHL4_400M_050219_2,7385,ALSDHHIYL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7386 38.908 227.0 172270.0 25 0 14596.0 + 45200 YQTEIGQTL 9 68 526.7663411529778 1051.5181293727555 2 526.7660400271416 MULTI CID FTMS 0 0 0 7383 193092.859375 1.0 0 0.0 3 Unmodified _YQTEIGQTL_ ENSG00000160752|ENST00000368356|FDPS;ENST00000453932.1_1_7:76099481-76100288:-|nuORF;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS 36.12702656103203 0.0967173616627612 6 {I|L}EC(Carbamidomethyl (C))T{I|L} 5 6 36.643 0.0 0.0 3.4848 0.0 0.0 417.2235869916993 0.0 417.2235869916993 0.0 1.5308998699194376 0.0 0.0 0 0.0 0.0 1.274227503252014 0.0 {I|L}EC(Carbamidomethyl (C))T{I|L} 3.4848 - 253 + 1 1.541 35629.6 1.0 2066 5318 7383 SUDHL4_400M_050219_2,7386 SUDHL4_400M_050219_2,7386,YQTEIGQTL True True YQTEIGQTL 38.908235 526.766040027142 956960.3125 7383.0 ENST00000453932.1_1_7:76099481-76100288:-|nuORF;;ENSG00000160752|ENST00000368356|FDPS;;ENST00000470171.5_1_1:155279855-155288545:+|nuORF;;nc|ENSG00000160752|P14324-2|FDPS 6.009596188863118 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7387 38.916 441.0 222520.0 25 0 30508.0 + 34464 SLYSQVHQI 9 105 537.7823979273775 1073.5502429215549 2 537.7823364138603 MULTI CID FTMS 0 0 0 7383 155794.734375 0.8706311328558927 -1 0.1237297058105468 4 Unmodified _SLYSQVHQI_ ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12 65.23502041540118 0.0231836506122253 6 {[TV]|[{I|L}S]}YSQVHQ{I|L} 9 0 + 70.67 0.0 0.0 6.5829 6.5829 87.774 0.0 0.0 0.0 23.81093727522561 7.772538308114889 7.772538308114889 7.772538308114889 0 0.75 2.0 0.3252574989159953 1.1688265215345564 + + {[TV]|[{I|L}S]}YSQVHQ{I|L};{[TV]|[{I|L}S]}YSQVHAAV;{[TV]|[{I|L}S]}YS[AG]VHQ{I|L};{[TV]|[{I|L}S]}YSQVH[AG]{I|L};{[TV]|[{I|L}S]}YS[AG]VHAAV;{[TV]|[{I|L}S]}YS[AG]VH[AG]{I|L};{[TV]|[{I|L}S]}Y[HN]Q{I|L}S{I|L};{[TV]|[{I|L}S]}[HN]YQ{I|L}S{I|L};{[TV]|[{I|L}S]}{[QN]|[E{I|L}]|[KN]}WWQ{I|L};{[TV]|[{I|L}S]}{[QN]|[E{I|L}]|[KN]}[RP]C(Carbamidomethyl (C))TV 6.5829;5.8588;5.7251;5.5019;4.1397;3.7827;3.2702;3.0111;2.8765;2.8002 +;-;-;-;-;-;-;-;-;- + 611 + 1 1.541 81523.8 1.0 2067 5318 7383 SUDHL4_400M_050219_2,7387 SUDHL4_400M_050219_2,7387,SLYSQVHQI True True SLYSQVHQI 38.916079 537.78233641386 1572259.5 7383.0 ENSG00000184634|ENST00000374080|MED12;;nc|ENSG00000184634|Q93074-2|MED12;;nc|ENSG00000184634|Q93074-3|MED12 6.88791561126709 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7388 38.93 800.0 163690.0 25 0 12825.0 + 15646 IQKEATWTM 9 145 562.2763212498102 1122.5380895664202 2 562.2763549685478 MULTI CID FTMS 0 0 0 7383 111830.8203125 1.0 0 0.0 5 Oxidation (M) _IQKEATWTM(Oxidation (M))_ ENSG00000182481|ENST00000330459|KPNA2;ENST00000578492.5_1_17:62750240-62754721:-|nuORF 45.69961567697781 0.0497987121815769 6 WT{M(Oxidation (M))|F} 3 6 30.802 0.0 0.0 2.744 0.0 0.0 670.365617497864 0.0 670.365617497864 0.0 18.58349385648225 0.0 0.0 0 0.3807196863200844 0.0 0.7302046884880937 0.0 + WT{M(Oxidation (M))|F} 2.744 + + 316 + 1 1.541 102793.2 0.5400000214576721 2068 5318 7383 SUDHL4_400M_050219_2,7388 SUDHL4_400M_050219_2,7388,IQKEATWTM True False IQKEATWTM 38.929912 562.276354968548 1416599.75 7383.0 ENSG00000182481|ENST00000330459|KPNA2;;ENST00000578492.5_1_17:62750240-62754721:-|nuORF 4.441165129343669 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7389 38.937 395.0 180510.0 25 0 14641.0 + 14682 IISGQELTY 9 106 512.2707679746267 1022.5269830160534 2 512.2708007693291 MULTI CID FTMS 0 0 0 7383 90832.5234375 0.9418459740829112 -1 0.1237297058105468 6 Unmodified _IISGQELTY_ REV__ENSG00000063015|ENST00000317338|SEZ6;REV__nc|ENSG00000063015|Q53EL9-2|SEZ6;REV__nc|ENSG00000063015|Q53EL9-3|SEZ6 23.1484247019978 0.2366544122328345 6 TY 2 -1 24.024 0.0 0.0 2.3494 0.0 0.0 740.4056092619651 0.0 740.4056092619651 0.0 12.42992819099939 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 TY 2.3494 + + 127 + 1 1.541 58983.9 1.0 2069 5318 7383 SUDHL4_400M_050219_2,7389 SUDHL4_400M_050219_2,7389,IISGQELTY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7390 38.947 589.0 252370.0 25 0 22407.0 + + 40754 SLQDEIQRV 9 151 543.8119543956859 0 543.8118774294853 PEAK CID FTMS 0 0 0 7383 88593.328125 1.0 0 0.0 7 Unmodified _VLITDRELQ_ ENSG00000065183|ENST00000349139|WDR3 36.12702656103203 0.0807574182900477 6 QDE{I|L}Q 5 -1 37.875 0.0 0.0 3.4888 0.0 0.0 199.15845020988743 270.1572039358552 469.31565414574266 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.7302046884880937 QDE{I|L}Q 3.4888 - 471 + 1 1.541 116886.4 1.0 2070 5318 7383 SUDHL4_400M_050219_2,7390 SUDHL4_400M_050219_2,7390,VLITDRELQ False False SLQDEIQRV 38.947312 543.811877429485 2161061.25 7383.0 ENSG00000065183|ENST00000349139|WDR3 6.694422721862793 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7391 38.95 143.0 644500.0 25 0 387800.0 + 27276 PHGKVSSK 8 70 420.241404944863 838.468256956526 2 420.2407104372978 MULTI CID FTMS 0 0 0 7383 333236.3125 0.5107928583780128 -2 0.2821502685546875 8 Unmodified _PHGKVSSK_ REV__ENSG00000135315|ENST00000403245|CEP162;REV__ENST00000497936.5_1_6:84884653-84936120:-|nuORF;REV__nc|ENSG00000135315|Q5TB80-2|CEP162 2.059750862983233 0.8118298629782807 6 CH 2 -1 10.969 0.0 0.0 1.3082 0.0 0.0 316.218941626251 279.1450594537719 595.364001080023 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 CH 1.3082 - 3 + 1 1.541 79533.8 1.0 2071 5318 7383 SUDHL4_400M_050219_2,7391 SUDHL4_400M_050219_2,7391,PHGKVSSK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7392 38.955 247.0 329540.0 25 0 34405.0 + 28967 KTRIIDVVY 9 95 552.8126314947068 1103.6107100562135 2 553.8080322146416 MULTI CID FTMS 0 0 0 7383 125245.453125 0.4064807328440242 -3 0.5200538635253906 9 Unmodified _QDKVLRFAQ_ ENSG00000142937|ENST00000396651|RPS8 21.53697664764585 0.2571576504437394 6 {[QD]|[EN]|[WG]|[KD]|[RS]}KVKKV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 5 + 35.422 0.0 0.0 3.2097 3.2097 71.38 0.0 0.0 0.0 1.7165906731557357 0.5846832397547601 0.5846832397547601 1.7165906731557357 0 0.0 0.0 0.7742275032520141 0.6307196863200843 {[QD]|[EN]|[WG]|[KD]|[RS]}KVKKV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[KQ]DVKKV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}V]EEKKV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}V][SG]NKKV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}[NG]VKKV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QD]|[EN]|[WG]|[KD]|[RS]}KV{I|L}[KP][YN];[VS]{[QG]|[NA]}VKKV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[TV]|[{I|L}S]}RNKKV{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[KQ]DV{I|L}[KP][YN];[{I|L}V]EE{I|L}[KP][YN] 3.2097;3.0541;2.9842;2.8104;2.3753;1.9191;1.864;1.8325;1.7636;1.6937 -;-;-;-;-;-;-;-;-;- 784 1 1.541 73465.1 1.0 2072 5318 7383 SUDHL4_400M_050219_2,7392 SUDHL4_400M_050219_2,7392,QDKVLRFAQ False False KTRIIDVVY 38.954795 553.808032214642 600199.8125 7383.0 ENSG00000142937|ENST00000396651|RPS8 3.0794568061828613 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7394 38.973 800.0 117560.0 25 0 7579.7 + 31986 RVFPEKGYSF 10 96 615.3187054145203 1228.6228578958403 2 615.3181030154228 MULTI CID FTMS 0 0 0 7393 73670.4765625 0.5465012419085276 3 -0.1509552001953125 1 Unmodified _RVFPEKGYSF_ ENSG00000151923|ENST00000436547|TIAL1;ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;nc|ENSG00000151923|Q01085-2|TIAL1 32.037481411007896 0.2488723560272515 6 [YG]S 3 7 21.171 0.0 0.0 1.7231 0.0 0.0 0.0 918.4828487007812 918.4828487007812 0.4575749056067479 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [YG]S 1.7231 + + 236 1 1.541 74996.6 0.4799999892711639 2073 5319 7393 SUDHL4_400M_050219_2,7394 SUDHL4_400M_050219_2,7394,RVFPEKGYSF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7395 38.976 189.0 549980.0 25 0 60769.0 + 30979 RLAVYIDKV 9 87 538.8267523255453 1075.6389517178904 2 538.8267089724541 MULTI CID FTMS 0 0 0 7393 317875.53125 0.2661292305895522 -2 0.183868408203125 2 Unmodified _RLAVYIDKV_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 45.69961567697781 0.0497987121815769 6 VY{I|L}DKV 6 3 48.448 0.0 0.0 4.5042 0.0 0.0 340.2214527814469 0.0 340.2214527814469 0.0 22.977372199242296 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 + VY{I|L}DKV 4.5042 + + 96 1 1.541 80400.5 1.0 2074 5319 7393 SUDHL4_400M_050219_2,7395 SUDHL4_400M_050219_2,7395,RLAVYIDKV True True RLAVYIDKV 38.976158 538.826708972454 11101078.0 7393.0 chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;;ENSG00000113368|ENST00000261366|LMNB1 4.677950382232666 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7396 38.98 187.0 393220.0 25 0 45510.0 + 10552 FVEVGRVAY 9 83 520.2817517479585 1038.548950562717 2 520.2819702029228 MULTI CID FTMS 0 0 0 7393 284362.1875 1.0 0 0.0 3 Unmodified _FVEVGRVAY_ ENSG00000188846|ENST00000396203|RPL14 37.97399986684836 0.0865783450051559 6 VEVE 4 6 44.24 0.0 0.0 4.2598 0.0 0.0 564.3017717405094 0.0 564.3017717405094 0.0 30.260847058321687 0.0 0.0 0 0.805462187404089 0.0 0.4247425010840047 0.0 VEVE 4.2598 - 66 1 1.541 59574.0 1.0 2075 5319 7393 SUDHL4_400M_050219_2,7396 SUDHL4_400M_050219_2,7396,FVEVGRVAY True True FVEVGRVAY 38.979766 520.281970202923 1548910.375 7393.0 ENSG00000188846|ENST00000396203|RPL14 5.101053396860759 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7397 38.985 283.0 296250.0 25 0 36281.0 + 34250 SLQDEIQRV 9 101 544.2912255678099 1086.5678982024197 2 544.2918578982353 MULTI CID FTMS 0 0 0 7393 210657.453125 0.9798026060042327 -1 0.0601387023925781 4 Unmodified _SLQDEIQRV_ ENSG00000065183|ENST00000349139|WDR3 51.629811660486645 0.0367964933207742 6 {[TV]|[{I|L}S]}QDE{I|L}Q[RV] 9 0 + 82.118 0.0 0.0 7.5575 7.5575 92.255 0.0 0.0 0.0 65.74900810497097 7.147642715192504 7.147642715192504 9.208187539523747 0 0.8494850021680094 2.0 0.5 0.9749073637206092 + + {[TV]|[{I|L}S]}QDE{I|L}Q[RV];{[TV]|[{I|L}S]}QDE{I|L}[AG][RV];{[TV]|[{I|L}S]}[AG]DE{I|L}Q[RV];{[TV]|[{I|L}S]}[AG]DE{I|L}[AG][RV];{[TV]|[{I|L}S]}QVEEQ[RV];{[TV]|[{I|L}S]}QDEVAA[RV];{[TV]|[{I|L}S]}Q{[QN]|[E{I|L}]|[KN]}DQ[RV];{[TV]|[{I|L}S]}[AG]VEEQ[RV];{[TV]|[{I|L}S]}QVEE[AG][RV];{[TV]|[{I|L}S]}VQEEQ[RV] 7.5575;6.7101;6.7101;5.8667;5.8319;5.5662;5.5548;4.9844;4.9844;4.8669 +;-;-;-;-;-;-;-;-;- + 394 + 1 1.541 66581.5 1.0 2076 5319 7393 SUDHL4_400M_050219_2,7397 SUDHL4_400M_050219_2,7397,SLQDEIQRV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7398 38.989 207.0 455970.0 25 0 43644.0 + 20072 LIVEPSREL 9 85 528.3083886055542 1054.6022242779084 2 528.3080932497978 MULTI CID FTMS 0 0 0 7393 208728.484375 0.3954287220723358 -3 0.3422889709472656 5 Unmodified _LIVEPSREL_ ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 29.081581746732265 0.1611639662936252 6 {I|L}{I|L}VE 4 5 61.983 0.0 0.0 5.8773 0.0 0.0 0.0 597.2995924359565 597.2995924359565 44.98773768811724 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 + {I|L}{I|L}VE 5.8773 + + 215 + 1 1.541 80651.8 1.0 2077 5319 7393 SUDHL4_400M_050219_2,7398 SUDHL4_400M_050219_2,7398,LIVEPSREL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7399 39.003 800.0 121540.0 25 0 10516.0 + 18121 KTLERSYLL 9 121 561.8294990375065 0 561.8296386599541 PEAK CID FTMS 0 0 0 7393 118606.8203125 1.0 0 0.0 6 Unmodified _KTLERSYLL_ ENSG00000167325|ENST00000300738|RRM1 40.23920728925047 0.0605413866147893 6 T{I|L}E 3 6 28.887 0.0 0.0 2.5754 0.0 0.0 128.09547134517285 647.3541353815061 775.4496067266789 0.0 0.0 0.0 0.0 0 0.5941876774005249 0.0 0.6747425010840047 0.0 + T{I|L}E 2.5754 + + 119 + 1 1.541 76741.4 0.550000011920929 2078 5319 7393 SUDHL4_400M_050219_2,7399 SUDHL4_400M_050219_2,7399,KTLERSYLL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7400 39.017 800.0 127600.0 25 0 9788.5 + 31981 RVFPDKGYSF 10 107 608.3116462549168 1214.6087395766335 2 608.3118774294853 MULTI CID FTMS 0 0 0 7393 118224.296875 1.0 0 0.0 7 Unmodified _RVFPDKGYSF_ ENSG00000116001|ENST00000433529|TIA1;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1 42.312485326615175 0.1331477410672653 6 [RV]{M(Oxidation (M))|F}[DP]KGY 8 2 34.74 0.0 0.0 2.8602 0.0 0.0 0.0 249.09129424854203 249.09129424854203 16.57908917233749 0.0 0.0 0.0 0 1.1549471895720984 0.7695510786217261 0.5 0.2614393726401688 + [RV]{M(Oxidation (M))|F}[DP]KGY 2.8602 + + 219 1 1.541 77893.4 0.5400000214576721 2079 5319 7393 SUDHL4_400M_050219_2,7400 SUDHL4_400M_050219_2,7400,RVFPDKGYSF False True RVFPDKGYSF 39.016603 608.311877429485 1262800.125 7393.0 ENST00000477415.5_1_2:70443338-70451751:-|nuORF;;nc|ENSG00000116001|P31483-2|TIA1;;ENSG00000116001|ENST00000433529|TIA1;;ENST00000482876.5_1_2:70442329-70444102:-|nuORF 7.476685047149658 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7401 39.03 800.0 178090.0 25 0 23532.0 -1 0 86 904.9555358661588 0 904.9575073122978 PEAK CID FTMS 0 0 0 7393 83261.296875 0.731206006492415 -1 0.0601387023925781 8 6 {I|L}[NP]{I|L}NEE 7 -1 33.716 0.0 0.0 1.8649 0.0 0.0 137.06567643359205 858.4193764430448 995.4850528766368 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.4247425010840047 {I|L}[NP]{I|L}NEE 1.8649 - 241 + 1 1.541 102392.3 0.4199999868869781 2080 5319 7393 SUDHL4_400M_050219_2,7401 SUDHL4_400M_050219_2,7401, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7402 39.04 429.0 212260.0 25 0 45308.0 + 17415 KMTYLMYLID 10 90 430.8881689329039 0 430.8880493044853 PEAK CID FTMS 0 0 0 7393 148331.703125 0.635259497880735 -53 2.137500762939453 9 Unmodified _KMTYLMYLID_ REV__ENSG00000067177|ENST00000373542|PHKA1;REV__nc|ENSG00000067177|P46020-2|PHKA1;REV__nc|ENSG00000067177|P46020-3|PHKA1 6.2057823575117 0.3961065659209838 6 G 1 -1 3.0989 0.0 0.0 0.36044 0.0 0.0 703.6354096658094 96.08223138980702 799.7176410556165 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.36044 - 11 + 1 1.541 75242.0 1.0 2081 5319 7393 SUDHL4_400M_050219_2,7402 SUDHL4_400M_050219_2,7402,KMTYLMYLID False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7404 39.046 115.0 351130.0 25 0 46599.0 + 37077 TGKGSAKA 8 78 360.2052971486252 718.3960413640505 2 360.2064391970634 MULTI CID FTMS 0 0 0 7403 387211.0 0.2680897684026723 2 -0.06622314453125 1 Unmodified _TGKGSAKA_ REV__ENST00000520834.1_1_8:65489507-65489756:-|nuORF 0.0 0.8243325171867699 6 [VP]YV{[QN]|[E{I|L}]|[KN]} 6 -1 + 13.645 0.0 0.0 1.8994 1.8994 80.282 0.0 0.0 0.0 13.645162531850874 1.962724883926656 1.962724883926656 13.645162531850874 0 0.0 0.0 0.0 0.0 [VP]YV{[QN]|[E{I|L}]|[KN]} 1.8994 - 9 + 1 1.541 38877.8 1.0 2082 5320 7403 SUDHL4_400M_050219_2,7404 SUDHL4_400M_050219_2,7404,TGKGSAKA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7405 39.052 318.0 242980.0 25 0 24827.0 28092 PPKIPGGA 8 127 368.7198354725169 0 368.7198058962822 PEAK CID FTMS 0 0 0 7403 164172.421875 0.2383027034372992 3 -0.1512832641601562 2 Unmodified _PPKIPGGA_ ENSG00000173486|ENST00000309366|FKBP2;ENST00000541388.1_1_11:64010007-64011498:+|nuORF 0.7936320650641473 0.5979579398327216 6 A 1 7 0.71334 0.0 0.0 0.096997 0.0 0.0 493.2618469930823 168.10285364322502 661.3647006363074 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + A 0.096997 + + 1 + 1 1.541 67923.2 1.0 2083 5320 7403 SUDHL4_400M_050219_2,7405 SUDHL4_400M_050219_2,7405,PPKIPGGA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7407 39.056 56.0 699580.0 25 0 114860.0 + 12978 HAIPPTLAM 9 58 483.7571500620577 965.4997471909154 2 483.7574035525322 MULTI CID FTMS 0 0 0 7406 841574.875 0.9499910611141816 2 -0.1392288208007812 1 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 6 {I|L}AH{I|L}A{M(Oxidation (M))|F} 6 5 28.945 0.0 0.0 2.998 0.0 0.0 295.15336806465 0.0 295.15336806465 0.0 11.95554701812867 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.0 {I|L}AH{I|L}A{M(Oxidation (M))|F} 2.998 - 67 1 1.541 36909.5 1.0 2084 5321 7406 SUDHL4_400M_050219_2,7407 SUDHL4_400M_050219_2,7407,HAIPPTLAM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7408 39.059 146.0 326460.0 25 0 50543.0 -1 LHLAVMLG 8 75 435.25071808231087 868.4868832314218 2 435.2509033083916 MULTI CID FTMS 0 0 0 7406 332226.84375 0.7743732616905589 3 -0.1519355773925781 2 Oxidation (M) _LHLAVM(Oxidation (M))LG_ ENSG00000118454|ENST00000370944|ANKRD13C;nc|ENSG00000118454|Q8N6S4-2|ANKRD13C 0.7936320650641473 0.8195151834710337 6 {M(Oxidation (M))|F} 1 -1 11.783 0.0 0.0 1.3567 0.0 0.0 703.4405860896234 0.0 703.4405860896234 0.0 4.793036574208873 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3567 + + 3 + 1 1.541 40381.6 1.0 2085 5321 7406 SUDHL4_400M_050219_2,7408 SUDHL4_400M_050219_2,7408,LHLAVMLG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7409 39.063 222.0 318380.0 25 0 56469.0 + 20720 LLSDTVQHL 9 90 513.2845813445768 1024.5546097559536 2 513.2853881716728 MULTI CID FTMS 0 0 0 7406 236039.390625 0.3790538493841603 -1 0.012054443359375 3 Unmodified _LLSDTVQHL_ ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF 49.93300154707207 0.0405168250806675 6 {I|L}{I|L}SDTVQH{I|L} 9 0 + 70.512 0.0 0.0 6.8822 6.8822 93.748 0.0 0.0 0.0 55.90797194541551 9.87765543582988 9.87765543582988 18.015384402724592 0 0.7614393726401688 2.0 0.4247425010840047 0.8807196863200843 + + {I|L}{I|L}SDTVQH{I|L};{I|L}{I|L}SDTV[AG]H{I|L};{I|L}{I|L}SD[WP]VPV;{I|L}{I|L}{[RE]|[WV]}[MN]H{I|L};[H{I|L}]Q{[C(Carbamidomethyl (C))E]|[WC]}{I|L}{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}[HQ]{I|L}{I|L}{I|L};[H{I|L}][AG]{[C(Carbamidomethyl (C))E]|[WC]}{I|L}{I|L}{I|L} 6.8822;5.1239;3.8022;3.1718;1.1824;0.83602;0.27838 +;-;-;-;-;-;- + 337 + 1 1.541 57708.5 1.0 2086 5321 7406 SUDHL4_400M_050219_2,7409 SUDHL4_400M_050219_2,7409,LLSDTVQHL True True LLSDTVQHL 39.063476 513.285388171673 3194755.25 7406.0 ENST00000555641.1_1_12:57499966-57502061:-|nuORF;;ENSG00000166888|ENST00000300134|STAT6 6.450538635253906 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7410 39.067 192.0 237840.0 25 0 29346.0 + 22395 RVADGLPLA 9 68 456.2693796004755 910.524206267751 2 456.2681762576103 MULTI CID FTMS 0 0 0 7406 157487.21875 1.0 0 0.0 4 Unmodified _LPSTGRPLA_ ENSG00000265808|ENST00000578049|SEC22B 16.942295170755138 0.3780752226737986 6 [{I|L}P][KC]G{I|L} 6 5 25.635 0.0 0.0 2.8154 0.0 0.0 0.0 296.1628122732671 296.1628122732671 13.416375079047498 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 [{I|L}P][KC]G{I|L} 2.8154 - 47 1 1.541 42022.5 1.0 2087 5321 7406 SUDHL4_400M_050219_2,7410 SUDHL4_400M_050219_2,7410,LPSTGRPLA False False RVADGLPLA 39.067157 456.26817625761 794934.375 7406.0 ENSG00000265808|ENST00000578049|SEC22B 5.571367899576823 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7411 39.076 494.0 239110.0 25 0 65152.0 + + 16238 VLARVAVPSA 10 98 491.80561155879474 981.5966701843896 2 491.8057128787041 MULTI CID FTMS 0 0 0 7406 127434.578125 0.1104607271418793 -3 0.1569252014160156 5 Unmodified _IVNRLLPSA_ ENST00000361256.9_1_9:131585006-131586171:-|nuORF 61.357469665136826 0.0253304979873734 6 V{I|L}{[CA]|SS}N 5 -1 56.021 0.0 0.0 5.7071 0.0 0.0 0.0 478.3143099420532 478.3143099420532 35.300718963042335 0.0 0.0 0.0 0 0.5078792628615163 2.0 0.3494850021680094 0.7614393726401688 V{I|L}{[CA]|SS}N 5.7071 - 161 + 1 1.541 92918.0 1.0 2088 5321 7406 SUDHL4_400M_050219_2,7411 SUDHL4_400M_050219_2,7411,IVNRLLPSA False False VLARVAVPSA 39.075876 491.805712878704 5573311.5 7406.0 ENST00000361256.9_1_9:131585006-131586171:-|nuORF -0.044080709417661 2.0 False 10.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7412 39.09 800.0 187860.0 25 0 21413.0 + 20254 LLDPNVKSI 9 153 499.7972975043821 0 499.7972900271416 PEAK CID FTMS 0 0 0 7406 116109.7421875 0.89685922245291 -1 0.012054443359375 6 Unmodified _LLDPNVKSI_ ENSG00000117419|ENST00000372257|ERI3;nc|ENSG00000117419|O43414-2|ERI3;nc|ENSG00000117419|O43414-3|ERI3 55.50274090549119 0.0215595200729321 6 {I|L}DPNVKS 7 2 34.748 0.0 0.0 3.4832 0.0 0.0 113.08707440153916 128.07187830142814 241.15895270296733 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.7989651419161623 0.0 + {I|L}DPNVKS 3.4832 + + 542 + 1 1.541 117370.9 0.5299999713897705 2089 5321 7406 SUDHL4_400M_050219_2,7412 SUDHL4_400M_050219_2,7412,LLDPNVKSI True True LLDPNVKSI 39.089693 499.797290027142 601340.4375 7406.0 nc|ENSG00000117419|O43414-2|ERI3;;nc|ENSG00000117419|O43414-3|ERI3;;ENSG00000117419|ENST00000372257|ERI3 5.81149419148763 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7413 39.101 650.0 150840.0 25 0 8901.6 + 13375 HLIEPLANA 9 125 489.27462996564594 976.534706998092 2 489.2746765017509 MULTI CID FTMS 0 0 0 7406 105150.5234375 0.6275665067885785 -1 0.012054443359375 7 Unmodified _HLIEPLANA_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 77.98433622928108 0.0180125044636492 6 [H{I|L}]{I|L}EP{I|L}A{[QG]|[NA]} 9 0 + 69.961 0.0 0.0 7.1642 7.1642 93.11 0.0 0.0 0.0 18.652792693512403 57.48655651770324 18.652792693512403 11.465664310361817 0 0.8807196863200843 1.3010299956639813 0.9269359821608808 0.0 + + [H{I|L}]{I|L}EP{I|L}A{[QG]|[NA]};[H{I|L}]{I|L}EPA{I|L}{[QG]|[NA]};[{M(Oxidation (M))|F}V]{[QN]|[E{I|L}]|[KN]}T{I|L}A{[QG]|[NA]};[H{I|L}]{I|L}[PA]E{I|L}{[QG]|[NA]};[{M(Oxidation (M))|F}V]{[QN]|[E{I|L}]|[KN]}TA{I|L}{[QG]|[NA]};[H{I|L}][PA]{I|L}E{I|L}{[QG]|[NA]};[H{I|L}]{I|L}[HA]{I|L}HH;[{I|L}P][HA]{I|L}E{I|L}{[QG]|[NA]};[H{I|L}][PA]KK{[{M(Oxidation (M))|F}H]|[RQ]} 7.1642;5.9901;3.8496;2.8593;2.6755;2.1435;1.5559;1.0167;0.40198 +;-;-;-;-;-;-;-;- + 241 1 1.541 77875.4 1.0 2090 5321 7406 SUDHL4_400M_050219_2,7413 SUDHL4_400M_050219_2,7413,HLIEPLANA True True HLIEPLANA 39.101005 489.274676501751 906776.125 7406.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 6.12933333714803 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7414 39.106 255.0 212660.0 25 0 17533.0 + -1 HLLAPIEKM 9 96 534.2991121201118 1066.5836713070237 2 534.2996703982353 MULTI CID FTMS 0 0 0 7406 105405.25 0.7796833803582648 -1 0.012054443359375 8 Oxidation (M) _HLLAPIEKM(Oxidation (M))_ REV__ENSG00000121940|ENST00000369969|CLCC1;REV__ENST00000482889.1_1_1:109472820-109486481:-|nuORF;REV__nc|ENSG00000121940|Q96S66-2|CLCC1;REV__nc|ENSG00000121940|Q96S66-3|CLCC1;REV__nc|ENSG00000121940|Q96S66-4|CLCC1 21.74664581756881 0.2544899275067181 6 [HA]{I|L}[{I|L}P]{I|L}KE{M(Oxidation (M))|F} 9 -1 + 53.94 0.0 0.0 5.0572 5.0572 88.027 0.0 0.0 0.0 30.92895806703715 14.018681655456689 14.018681655456689 17.58896451090905 0 1.5941876774005248 1.5228787452803376 0.3807196863200844 0.0 [HA]{I|L}[{I|L}P]{I|L}KE{M(Oxidation (M))|F};[HA][DV]{I|L}[{I|L}P]R{M(Oxidation (M))|F};[HA]{I|L}[DV][{I|L}P]R{M(Oxidation (M))|F};[HA]{I|L}[DP][{I|L}V]R{M(Oxidation (M))|F};[HA]{I|L}[{I|L}P][DV]R{M(Oxidation (M))|F};[H{I|L}][DG]{I|L}[{I|L}P]R{M(Oxidation (M))|F};[{I|L}A]H[DV][{I|L}P]R{M(Oxidation (M))|F};[{I|L}A]H[DP][{I|L}V]R{M(Oxidation (M))|F};[{I|L}A]H[{I|L}P][DV]R{M(Oxidation (M))|F};[H{I|L}]A[DV][{I|L}P]R{M(Oxidation (M))|F} 5.0572;3.4081;2.3707;2.2172;2.1998;1.7195;1.1724;1.0188;1.0015;0.68212 -;-;-;-;-;-;-;-;-;- 321 + 1 1.541 48306.3 1.0 2091 5321 7406 SUDHL4_400M_050219_2,7414 SUDHL4_400M_050219_2,7414,HLLAPIEKM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7416 39.123 800.0 135410.0 25 0 12932.0 + 25763 NIVERLKEV 9 146 550.3267631700985 1098.638973406997 2 550.3270751833916 MULTI CID FTMS 0 0 0 7415 87176.203125 0.7081469024077576 1 -0.0850601196289062 1 Unmodified _NIVERLKEV_ ENSG00000258659|ENST00000429814|TRIM34;ENST00000491385.1_1_11:5653561-5662456:+|nuORF;nc|ENSG00000258659|Q9BYJ4-2|TRIM34 53.40400417844725 0.0329064971918313 6 {[QV]|[N{I|L}]|[RA]|[KV]}V{[TV]|[{I|L}S]}V{[QV]|[N{I|L}]|[RA]|[KV]}EV 10 4 + 48.542 0.0 0.0 4.4183 4.4183 74.717 0.0 0.0 0.0 23.46787486224656 11.656205609827246 11.656205609827246 1.6439432979444817 0 1.4896518287104437 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V{[TV]|[{I|L}S]}V{[QV]|[N{I|L}]|[RA]|[KV]}EV;{[QV]|[N{I|L}]|[RA]|[KV]}V{[TV]|[{I|L}S]}VE{[QV]|[N{I|L}]|[RA]|[KV]}V;{[QV]|[N{I|L}]|[RA]|[KV]}V{[TV]|[{I|L}S]}[TP]KEV;{[QV]|[N{I|L}]|[RA]|[KV]}V{[TV]|[{I|L}S]}VQQ[KA];[{I|L}V]N{[TV]|[{I|L}S]}V{[QV]|[N{I|L}]|[RA]|[KV]}EV;{[QV]|[N{I|L}]|[RA]|[KV]}V{[TV]|[{I|L}S]}[TP]D[K{I|L}];[{I|L}V]N{[TV]|[{I|L}S]}VE{[QV]|[N{I|L}]|[RA]|[KV]}V;[{I|L}V][WK]V{[QV]|[N{I|L}]|[RA]|[KV]}EV;[{I|L}V]N{[TV]|[{I|L}S]}[TP]KEV;[{I|L}V][WK]VE{[QV]|[N{I|L}]|[RA]|[KV]}V 4.4183;4.2687;3.8703;2.3797;1.7429;1.6297;1.5933;1.2412;1.1949;1.0916 -;-;-;-;-;-;-;-;-;- 220 1 1.541 86513.9 0.5699999928474426 2092 5322 7415 SUDHL4_400M_050219_2,7416 SUDHL4_400M_050219_2,7416,NIVERLKEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7417 39.126 100.0 820770.0 25 0 107240.0 + 9403 FIYRRKYLLQ 10 59 467.2770627530591 1398.8093588593772 3 467.2770568728447 MULTI CID FTMS 0 0 0 7415 527018.25 0.0360260826642136 -5 0.3348236083984375 2 Unmodified _FIYRRKYLLQ_ REV__ENSG00000077235|ENST00000356183|GTF3C1;REV__nc|ENSG00000077235|Q12789-3|GTF3C1 3.5964929083625545 0.7100006075494749 6 {I|L}AVA 4 -1 30.918 0.0 0.0 2.2103 0.0 0.0 1026.5737171787152 0.0 1026.5737171787152 0.0 19.948500216800937 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}AVA 2.2103 - 19 1 1.541 71634.3 1.0 2093 5322 7415 SUDHL4_400M_050219_2,7417 SUDHL4_400M_050219_2,7417,FIYRRKYLLQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7418 39.128 138.0 523970.0 25 0 46278.0 + 31305 RLYQGINQL 9 101 552.8126314947068 1103.6107100562135 2 552.8113281130791 MULTI CID FTMS 0 0 0 7415 381156.8125 0.2886430657942403 -4 0.2110939025878906 3 Unmodified _RLYQGINQL_ ENSG00000095002|ENST00000233146|MSH2;nc|ENSG00000095002|P43246-2|MSH2 61.357469665136826 0.0253304979873734 6 [{I|L}V][YG]QG{I|L}NQ{I|L} 10 2 + 65.803 0.0 0.0 5.9625 5.9625 77.945 0.0 0.0 0.0 0.3218468337140052 16.532125137753432 0.3218468337140052 0.3218468337140052 0 0.3054621874040891 1.5228787452803376 0.0 1.024227503252014 [{I|L}V][YG]QG{I|L}NQ{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVQG{I|L}NQ{I|L};{[VA]|[{I|L}G]}[YV]QG{I|L}NQ{I|L};[R{I|L}]YQG{I|L}NQ{I|L};{[VA]|[{I|L}G]}A[YR]G{I|L}NQ{I|L};[{I|L}V][YG]QG{I|L}N[AG]{I|L};[{I|L}V][YG]QG{I|L}GGQ{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVQG{I|L}N[AG]{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVQG{I|L}GGQ{I|L};{[VA]|[{I|L}G]}[YV]QG{I|L}GGQ{I|L} 5.9625;5.9333;5.6422;5.5617;5.2099;5.1321;5.1321;5.1029;5.1029;4.8118 -;-;-;+;-;-;-;-;-;- + 785 1 1.541 58543.8 1.0 2094 5322 7415 SUDHL4_400M_050219_2,7418 SUDHL4_400M_050219_2,7418,RLYQGINQL True True RLYQGINQL 39.128394 552.811328113079 7314708.5 7415.0 ENSG00000095002|ENST00000233146|MSH2;;nc|ENSG00000095002|P43246-2|MSH2 7.007699648539226 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7419 39.135 346.0 139350.0 25 0 18246.0 26926 PDSFNIPGSS 10 88 510.7345979918832 1019.4546430505663 2 510.7352783083916 MULTI CID FTMS 0 0 0 7415 117916.75 0.7707643041872286 -1 0.054168701171875 4 Unmodified _PDSFNIPGSS_ ENSG00000084693|ENST00000360131|AGBL5;nc|ENSG00000084693|Q8NDL9-2|AGBL5 13.042465956692816 0.6287021003332052 6 [DP]S{M(Oxidation (M))|F}NE 6 5 26.827 0.0 0.0 2.6315 0.0 0.0 0.0 327.17086891381217 327.17086891381217 12.847813329426288 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.3054621874040891 [DP]S{M(Oxidation (M))|F}NE 2.6315 - 151 1 1.541 40585.2 1.0 2095 5322 7415 SUDHL4_400M_050219_2,7419 SUDHL4_400M_050219_2,7419,PDSFNIPGSS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7420 39.148 800.0 544180.0 25 0 175200.0 + -1 IVICQNKKRQL 11 118 700.4113957178429 1398.8082385024857 2 700.4133788943291 MULTI CID FTMS 0 0 0 7415 110760.09375 0.0256655534547379 -5 0.3348236083984375 5 Carbamidomethyl (C) _IVIC(Carbamidomethyl (C))QNKKRQL_ REV__ENSG00000066933|ENST00000356056|MYO9A;REV__ENST00000563542.5_1_15:72185266-72338904:-|nuORF;REV__nc|ENSG00000066933|B2RTY4-2|MYO9A;REV__nc|ENSG00000066933|B2RTY4-3|MYO9A;REV__nc|ENSG00000066933|B2RTY4-4|MYO9A 13.90604991867851 0.7458848613461305 6 [{I|L}V][R{M(Oxidation (M))|F}]GG 6 -1 38.707 0.0 0.0 2.7671 0.0 0.0 0.0 766.4246920221311 766.4246920221311 18.44573595225603 0.0 0.0 0.0 0 1.0941876774005248 2.0 0.0 0.3494850021680094 [{I|L}V][R{M(Oxidation (M))|F}]GG 2.7671 - 546 + 1 1.541 303256.3 0.5299999713897705 2096 5322 7415 SUDHL4_400M_050219_2,7420 SUDHL4_400M_050219_2,7420,IVICQNKKRQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7421 39.162 800.0 79635.0 25 0 7438.2 + -1 TFDGAQCMFSP 11 105 610.2407111058616 1218.466869278523 2 610.2418090701103 MULTI CID FTMS 0 0 0 7415 89753.484375 1.0 0 0.0 6 Oxidation (M) _TFDGAQCM(Oxidation (M))FSP_ REV__ENSG00000108179|ENST00000225174|PPIF;REV__nc|ENSG00000108179|P30405-2|PPIF 17.11289562659939 0.6791789249425932 6 DE 2 -1 14.57 0.0 0.0 1.1957 0.0 0.0 855.3253420341856 116.05092035465076 971.3762623888364 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.6694451763165201 0.0 DE 1.1957 - 101 + 1 1.541 50185.5 0.5 2097 5322 7415 SUDHL4_400M_050219_2,7421 SUDHL4_400M_050219_2,7421,TFDGAQCMFSP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7422 39.169 384.0 174310.0 25 0 14213.0 + 3176 ALMDEVVKA 9 104 496.2587695915572 990.5029862499144 2 496.2573730349541 MULTI CID FTMS 0 0 0 7415 98533.3515625 0.5082121741378549 -1 0.054168701171875 7 Unmodified _AVVEPYNSI_ nc|ENSG00000102144|P00558-2|PGK1;ENSG00000102144|ENST00000373316|PGK1 36.04419817259434 0.0971720506436186 6 [{I|L}A]{M(Oxidation (M))|F}DEVV[KA] 9 8 + 46.748 0.0 0.0 4.7196 4.7196 81.523 0.0 0.0 0.0 25.6424927368726 7.512262311882765 7.512262311882765 7.512262311882765 0 0.6382104921644451 2.0 0.0 0.3252574989159953 [{I|L}A]{M(Oxidation (M))|F}DEVV[KA];[{I|L}A]{M(Oxidation (M))|F}DEV[KG]{I|L};[{I|L}A][DV]P[YN]S{I|L};[{I|L}A][DV]P{[YD]|[{M(Oxidation (M))|F}M]}[KA];[{I|L}A]{[{M(Oxidation (M))|F}H]|[RQ]}CCV[KA];[{I|L}A]RR[MD]ET 4.7196;3.9612;3.858;3.4845;1.992;0.84434 -;-;-;-;-;- 287 + 1 1.541 58228.8 1.0 2098 5322 7415 SUDHL4_400M_050219_2,7422 SUDHL4_400M_050219_2,7422,AVVEPYNSI True True ALMDEVVKA 39.169178 496.2585 1059102.0 7415.0 nc|ENSG00000102144|P00558-2|PGK1;;ENSG00000102144|ENST00000373316|PGK1 6.498809178670247 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7423 39.183 800.0 106830.0 25 0 9281.2 + 13316 HLAIKLEQV 9 121 525.8190483070549 1049.6235436809095 2 525.8194457888603 MULTI CID FTMS 0 0 0 7415 87298.015625 0.991431601784376 -1 0.054168701171875 8 Unmodified _HLAIKLEQV_ ENSG00000145041|ENST00000684031|DCAF1;nc|ENSG00000145041|Q9Y4B6-2|DCAF1 66.45667989310934 0.0225072657982126 6 H{I|L}A{I|L} 4 5 57.907 0.0 0.0 5.517 0.0 0.0 0.0 612.3352144830686 612.3352144830686 27.60258371038248 0.0 0.0 0.0 0 1.5 1.6989700043360187 0.0 0.0 + H{I|L}A{I|L} 5.517 + + 492 + 1 1.541 70202.9 0.4799999892711639 2099 5322 7415 SUDHL4_400M_050219_2,7423 SUDHL4_400M_050219_2,7423,HLAIKLEQV True True HLAIKLEQV 39.183008 525.81944578886 540240.4375 7415.0 nc|ENSG00000145041|Q9Y4B6-2|DCAF1;;ENSG00000145041|ENST00000684031|DCAF1 7.738598664601644 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7424 39.191 351.0 178330.0 25 0 23793.0 + 1294 AISDSGAVNI 10 96 473.7463539383529 945.4781549435058 2 473.7469970583916 MULTI CID FTMS 0 0 0 7415 87454.6953125 0.7261790434485218 -1 0.054168701171875 9 Unmodified _AISDSGAVNI_ REV__ENSG00000204311|ENST00000644580|PJVK 25.399314129420983 0.3980215340001851 6 {[VA]|[{I|L}G]}GE 4 -1 21.427 0.0 0.0 2.2662 0.0 0.0 0.0 586.2857165492277 586.2857165492277 5.251130462015677 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[VA]|[{I|L}G]}GE 2.2662 - 328 1 1.541 53033.0 1.0 2100 5322 7415 SUDHL4_400M_050219_2,7424 SUDHL4_400M_050219_2,7424,AISDSGAVNI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7426 39.196 79.0 765660.0 25 0 80185.0 + 32038 RVITQLVSA 9 66 493.8029395240546 985.5913261149092 2 493.8031188845634 MULTI CID FTMS 0 0 0 7425 886987.1875 1.0 0 0.0 1 Unmodified _RVITQLVSA_ REV__ENST00000339697.4_1_6:122768111-122768281:-|nuORF 32.78568957990786 0.1150597335874693 6 SQ{I|L}VSA 6 -1 34.213 0.0 0.0 3.4713 0.0 0.0 382.2679615705094 0.0 382.2679615705094 0.0 6.790521660407123 0.0 0.0 0 1.1549471895720984 0.0 0.4247425010840047 0.0 SQ{I|L}VSA 3.4713 - 71 1 1.541 52444.7 1.0 2101 5323 7425 SUDHL4_400M_050219_2,7426 SUDHL4_400M_050219_2,7426,RVITQLVSA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7427 39.204 394.0 180610.0 25 0 16714.0 -1 0 96 412.228088019318 411.220811552718 1 412.2308837771416 MULTI CID FTMS 0 0 0 7425 50064.51171875 0.145556192199501 9 -0.2747726440429687 2 6 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 2 -1 24.776 0.0 0.0 6.0251 0.0 0.0 99.10618938061658 0.0 99.10618938061658 0.0 12.993560375712343 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {M(Oxidation (M))|F}{M(Oxidation (M))|F} 6.0251 - 18 + 1 1.541 61699.2 1.0 2102 5323 7425 SUDHL4_400M_050219_2,7427 SUDHL4_400M_050219_2,7427, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7429 39.208 54.0 919380.0 25 0 86301.0 + 42655 VTVPPGPSL 9 83 433.75272576377824 0 433.7527038455009 PEAK CID FTMS 0 0 0 7428 1110401.625 0.251314965610028 -5 0.2487220764160156 1 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 67.34385681178166 0.0146349057813071 6 VPGPE 5 5 22.141 0.0 0.0 2.5582 0.0 0.0 315.17999879142525 68.0513170831664 383.2313158745917 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.4361818737241734 0.0 VPGPE 2.5582 - 143 + 1 1.541 44960.4 1.0 2103 5324 7428 SUDHL4_400M_050219_2,7429 SUDHL4_400M_050219_2,7429,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7430 39.21 52.0 875620.0 25 0 102740.0 -1 0 51 603.9672444161467 1808.87990384864 3 603.9680053591728 MULTI CID FTMS 0 0 0 7428 912573.9375 0.6479924601090883 -3 0.1519355773925781 2 6 [H{I|L}][NP]{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}Q 15 -1 + 74.855 0.0 0.0 4.1382 4.1382 83.209 0.0 0.0 0.0 9.51544993495972 0.0 0.0 9.51544993495972 0 0.7742275032520141 1.6989700043360187 0.0 0.0 [H{I|L}][NP]{I|L}NE{[YD]|[{M(Oxidation (M))|F}M]}G{M(Oxidation (M))|F}{I|L}H{I|L}Q;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H{I|L}{M(Oxidation (M))|F}G{[YD]|[{M(Oxidation (M))|F}M]}EN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q 4.1382;3.6122 -;- 109 1 1.541 40736.4 1.0 2104 5324 7428 SUDHL4_400M_050219_2,7430 SUDHL4_400M_050219_2,7430, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7432 39.217 235.0 306430.0 25 0 76737.0 -1 0 77 459.2806251870044 458.2733487204044 1 459.2808105349541 MULTI CID FTMS 0 0 0 7431 149427.0625 0.5496406625483268 10 -0.3179969787597656 1 6 {M(Oxidation (M))|F} 1 -1 11.783 0.0 0.0 2.5711 0.0 0.0 293.1935432778247 0.0 293.1935432778247 0.0 2.0288267309199703 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 2.5711 - 5 + 1 1.541 64597.6 1.0 2105 5325 7431 SUDHL4_400M_050219_2,7432 SUDHL4_400M_050219_2,7432, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7433 39.23 800.0 64815.0 25 0 10998.0 -1 0 53 988.4517843591344 2962.333523677603 3 988.4547607302666 MULTI CID FTMS 0 0 0 7431 60639.859375 0.5684996531976495 1 -0.0356292724609375 2 6 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3 -1 7.4473 0.0 0.0 0.2514 0.0 0.0 2569.2131477700623 0.0 2569.2131477700623 0.0 1.7609125905568137 0.0 0.0 0 0.0 0.0 0.0 0.0 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 0.2514 - 29 1 1.541 45207.3 0.4600000083446502 2106 5325 7431 SUDHL4_400M_050219_2,7433 SUDHL4_400M_050219_2,7433, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7434 39.236 323.0 256370.0 25 0 50541.0 + 11861 GLSNHIAAL 9 101 448.2539677518809 0 448.2537414431572 PEAK CID FTMS 0 0 0 7431 223549.734375 0.7013608294766416 -2 0.0188560485839843 3 Unmodified _GLSNHIAAL_ ENSG00000156802|ENST00000287394|ATAD2;ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;nc|ENSG00000156802|Q6PL18-2|ATAD2 19.256988751693697 0.2078072434435185 6 VAA{I|L} 4 6 19.781 0.0 0.0 2.2115 0.0 0.0 202.13432602934927 335.1111849420532 537.2455109714025 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 VAA{I|L} 2.2115 - 77 + 1 1.541 68612.1 1.0 2107 5325 7431 SUDHL4_400M_050219_2,7434 SUDHL4_400M_050219_2,7434,GLSNHIAAL False True GLSNHIAAL 39.236329 448.253741443157 2935705.75 7431.0 ENST00000521903.5_1_8:124361561-124413087:-|nuORF;;nc|ENSG00000156802|Q6PL18-2|ATAD2;;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;;ENSG00000156802|ENST00000287394|ATAD2;;ENST00000517666.5_1_8:124333376-124408650:-|nuORF 0.3406235128641128 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7435 39.245 509.0 173790.0 25 0 21659.0 + 20175 LKSQHVFV 8 125 479.2775589564674 956.5405649797348 2 479.2775146365166 MULTI CID FTMS 0 0 0 7431 114386.0234375 0.5077673636928609 -3 0.1039161682128906 4 Unmodified _LKSQHVFV_ REV__ENSG00000131914|ENST00000326279|LIN28A;REV__ENSG00000187772|ENST00000345080|LIN28B 5.760428011301431 0.7893668129297577 6 V 1 -1 11.99 0.0 0.0 1.2534 0.0 0.0 839.4612478184052 0.0 839.4612478184052 0.0 0.5697167615341847 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2534 + + 50 + 1 1.541 71989.5 1.0 2108 5325 7431 SUDHL4_400M_050219_2,7435 SUDHL4_400M_050219_2,7435,LKSQHVFV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7437 39.256 481.0 193360.0 25 0 17767.0 + 20073 LIVEPSREL 9 88 528.3083886055542 1054.6022242779084 2 528.3083373904228 MULTI CID FTMS 0 0 0 7436 135435.328125 0.2565774330431092 4 -0.1960563659667968 1 Unmodified _LIVEPSREL_ ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1;nc|ENSG00000079785|Q92499-3|DDX1 39.94969957227396 0.0757326808254658 6 {I|L}{I|L}VES 5 4 69.059 0.0 0.0 6.5483 0.0 0.0 0.0 510.2669771783813 510.2669771783813 48.596374259158935 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.7059771852360797 0.0 {I|L}{I|L}VES 6.5483 - 496 + 1 1.541 77411.3 1.0 2109 5326 7436 SUDHL4_400M_050219_2,7437 SUDHL4_400M_050219_2,7437,LIVEPSREL True True LIVEPSREL 39.256356 528.308337390423 6067919.0 7436.0 nc|ENSG00000079785|Q92499-2|DDX1;;nc|ENSG00000079785|Q92499-3|DDX1;;ENSG00000079785|ENST00000233084|DDX1 5.106768767038981 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7438 39.27 800.0 1134000.0 25 0 239550.0 -1 VAIPMPRLRNK 11 112 655.8876139355725 1309.760674937945 2 655.8885986208916 MULTI CID FTMS 0 0 0 7436 175281.515625 0.7753742533284435 -1 0.0356292724609375 2 Oxidation (M) _VAIPM(Oxidation (M))PRLRNK_ ENSG00000186094|ENST00000371839|AGBL4 18.1463463914782 0.6576820063886638 6 VA{I|L}[SG]RPNR{M(Oxidation (M))|F} 10 -1 50.966 0.0 0.0 3.8912 0.0 0.0 0.0 209.12954126529533 209.12954126529533 31.369069637791235 0.0 0.0 0.0 0 0.5796896906561032 1.3979400086720375 0.0 1.2059771852360797 VA{I|L}[SG]RPNR{M(Oxidation (M))|F} 3.8912 - 526 + 1 1.541 636887.9 0.6700000166893005 2110 5326 7436 SUDHL4_400M_050219_2,7438 SUDHL4_400M_050219_2,7438,VAIPMPRLRNK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7439 39.284 800.0 115390.0 25 0 11189.0 + 30980 RLAVYIDKV 9 101 538.8267523255453 1075.6389517178904 2 538.8269531130791 MULTI CID FTMS 0 0 0 7436 143411.03125 0.1200654459137981 5 -0.2000694274902343 3 Unmodified _RLAVYIDKV_ chr5:126811898-126815170|45|18.24|0.71|4.68|+|ENST00000460265|LMNB1,LMNB1;ENSG00000113368|ENST00000261366|LMNB1 26.268140514670165 0.1969607489560049 6 Y{I|L}DKV 5 4 45.89 0.0 0.0 4.2663 0.0 0.0 439.2907276837906 0.0 439.2907276837906 0.0 28.443102041839254 0.0 0.0 0 1.0941876774005248 0.0 0.0 0.0 + Y{I|L}DKV 4.2663 + + 140 1 1.541 73931.9 0.6100000143051147 2111 5326 7436 SUDHL4_400M_050219_2,7439 SUDHL4_400M_050219_2,7439,RLAVYIDKV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7440 39.295 630.0 243200.0 25 0 45785.0 + -1 LSDITDFCT 9 140 536.237597100316 1070.4606412674318 2 536.2371703982353 MULTI CID FTMS 0 0 0 7436 119891.3984375 0.3009526444871267 -2 0.041778564453125 4 Carbamidomethyl (C) _LSDITDFC(Carbamidomethyl (C))T_ REV__ENSG00000198796|ENST00000361673|ALPK2 36.12702656103203 0.0967173616627612 6 {[TV]|[{I|L}S]}D{I|L}TTT 7 -1 54.58 0.0 0.0 5.0988 0.0 0.0 0.0 336.0694588123103 336.0694588123103 39.07317099643854 0.0 0.0 0.0 0 1.453119819790884 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}D{I|L}TTT 5.0988 - 898 + 1 1.541 117745.2 1.0 2112 5326 7436 SUDHL4_400M_050219_2,7440 SUDHL4_400M_050219_2,7440,LSDITDFCT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7441 39.306 599.0 204800.0 25 0 9859.9 + -1 QVMEGRVTF 9 143 541.7690854256043 1081.5236179180083 2 541.7680541872978 MULTI CID FTMS 0 0 0 7436 99946.65625 0.4576001087380307 -1 0.0356292724609375 5 Oxidation (M) _QVM(Oxidation (M))EGRVTF_ ENSG00000103365|ENST00000309859|GGA2 36.506200033944 0.094635877243972 6 QV{M(Oxidation (M))|F}EG[RV]T{M(Oxidation (M))|F} 9 -1 + 68.611 0.0 0.0 6.3439 6.3439 92.436 0.0 0.0 0.0 49.566658892685766 11.003793646015652 11.003793646015652 18.20947833959288 0 0.3054621874040891 2.0 0.3494850021680094 0.0 QV{M(Oxidation (M))|F}EG[RV]T{M(Oxidation (M))|F};QV{M(Oxidation (M))|F}[QT][KG]Q{M(Oxidation (M))|F};[AG]Y[DP]RRT{M(Oxidation (M))|F};[AG]Y[DP]G[RV]T{M(Oxidation (M))|F};[AG]Y[W{I|L}][QP]T{M(Oxidation (M))|F};QV{M(Oxidation (M))|F}[KG]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}P{I|L};[AG]Y[W{I|L}][TP]Q{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}[YT][TP]TV{[CA]|SS};{[QV]|[N{I|L}]|[RA]|[KV]}[YT][W{I|L}]V{[CA]|SS};{[QV]|[N{I|L}]|[RA]|[KV]}[YT][SG]Y[HK] 6.3439;4.6602;2.9456;2.8301;2.6673;2.5891;2.4389;2.4178;2.3705;2.2102 +;-;-;-;-;-;-;-;-;- + 908 + 1 1.541 96603.4 1.0 2113 5326 7436 SUDHL4_400M_050219_2,7441 SUDHL4_400M_050219_2,7441,QVMEGRVTF False False QVMEGRVTF 39.30551 541.768054187298 1215520.875 7436.0 ENSG00000103365|ENST00000309859|GGA2 7.9131973584493 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7442 39.316 573.0 273220.0 25 0 28139.0 + -1 ALAPSTMKI 9 136 474.26516376798514 946.5157746027704 2 474.2652160525322 MULTI CID FTMS 0 0 0 7436 85422.8828125 0.2506521831423793 -2 0.041778564453125 6 Oxidation (M) _ALAPSTM(Oxidation (M))KI_ ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000107796|ENST00000224784|ACTA2;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB 39.94969957227396 0.0757326808254658 6 [{I|L}A]APST{M(Oxidation (M))|F}K{I|L} 9 -1 + 58.828 0.0 0.0 6.2152 6.2152 83.907 0.0 0.0 0.0 35.44723835406332 8.416375079047498 8.416375079047498 3.979400086720375 0 1.0 1.6989700043360187 0.6747425010840047 0.0 [{I|L}A]APST{M(Oxidation (M))|F}K{I|L};[{I|L}A]APS{M(Oxidation (M))|F}TK{I|L};[{I|L}A]APST[Q{I|L}]{M(Oxidation (M))|F};[{I|L}A]A{[MS]|[{M(Oxidation (M))|F}A]}[DV]K{I|L};[{I|L}A]A{I|L}[DG]{M(Oxidation (M))|F}K{I|L};[{I|L}A]APS[YN]V{I|L};[{I|L}A]APS[YN]{I|L}V;[{I|L}A]A{I|L}S[TA]AMV;[{I|L}A]A{I|L}[DC]TK{I|L};[{I|L}A]A{I|L}[MD][KS]V 6.2152;5.7948;5.2224;4.9868;4.7186;4.6475;4.4198;4.357;4.2982;4.1001 +;-;-;-;-;-;-;-;-;- + 928 + 1 1.541 122545.1 1.0 2114 5326 7436 SUDHL4_400M_050219_2,7442 SUDHL4_400M_050219_2,7442,ALAPSTMKI False False ALAPSTMKI 39.315541 473.7455 3504971.25 7436.0 ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;;ENSG00000163017|ENST00000345517|ACTG2;;ENSG00000107796|ENST00000224784|ACTA2;;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;;nc|ENSG00000163017|P63267-2|ACTG2;;ENSG00000159251|ENST00000290378|ACTC1;;ENSG00000143632|ENST00000366684|ACTA1;;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;;ENSG00000184009|ENST00000573283|ACTG1;;ENSG00000075624|ENST00000646664|ACTB 6.4053413073221845 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7443 39.331 800.0 81408.0 25 0 6377.7 -1 0 73 964.4433002476126 2890.3080713430377 3 964.7816039919852 MULTI CID FTMS 0 0 0 7436 73553.7578125 0.1139501676486555 -14 0.952068328857422 7 6 YD 2 -1 12.959 0.0 0.0 0.44835 0.0 0.0 2270.0281773994816 339.16785704160344 2609.196034441085 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 YD 0.44835 - 135 + 1 1.541 52316.2 0.3899999856948852 2115 5326 7436 SUDHL4_400M_050219_2,7443 SUDHL4_400M_050219_2,7443, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7445 39.336 75.0 895260.0 25 0 455320.0 + 16239 IVNRLLPSA 9 60 491.80561155879474 981.5966701843896 2 491.8058044314384 MULTI CID FTMS 0 0 0 7444 393838.90625 0.3413809077663743 3 -0.1108360290527343 1 Unmodified _IVNRLLPSA_ REV__ENSG00000222018|ENST00000410005|C21orf140 20.453626601364224 0.2830276176381075 6 [PS]A 3 -1 14.922 0.0 0.0 1.5201 0.0 0.0 0.0 723.4502522979238 723.4502522979238 2.4742501084004704 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.0 0.0 [PS]A 1.5201 + + 23 1 1.541 57153.8 1.0 2116 5327 7444 SUDHL4_400M_050219_2,7445 SUDHL4_400M_050219_2,7445,IVNRLLPSA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7446 39.338 80.0 632240.0 25 0 92018.0 + 12979 HAIPPTLAM 9 77 483.7571500620577 965.4997471909154 2 483.7572509646416 MULTI CID FTMS 0 0 0 7444 688510.8125 0.7772084656822275 8 -0.1971473693847656 2 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 40.44857923139169 0.0729940656229577 6 {I|L}AH{I|L}A{M(Oxidation (M))|F} 6 5 34.843 0.0 0.0 3.6088 0.0 0.0 295.1538330159943 0.0 295.1538330159943 0.0 17.853101874732843 0.0 0.0 0 1.1822333069283657 0.0 0.0 0.0 {I|L}AH{I|L}A{M(Oxidation (M))|F} 3.6088 - 104 1 1.541 45208.3 1.0 2117 5327 7444 SUDHL4_400M_050219_2,7446 SUDHL4_400M_050219_2,7446,HAIPPTLAM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7447 39.34 113.0 726270.0 25 0 110200.0 -1 0 58 905.447377064828 1808.880201196456 2 905.4474975466728 MULTI CID FTMS 0 0 0 7444 485843.75 1.0 0 0.0 3 6 H{I|L}PN{I|L}NEER[HM]N{I|L} 13 -1 80.708 0.0 0.0 4.4618 0.0 0.0 0.0 208.07293115787343 208.07293115787343 66.72862939585701 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.4247425010840047 H{I|L}PN{I|L}NEER[HM]N{I|L} 4.4618 - 285 + 1 1.541 61845.9 1.0 2118 5327 7444 SUDHL4_400M_050219_2,7447 SUDHL4_400M_050219_2,7447, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7448 39.343 138.0 314980.0 25 0 35525.0 + 35867 SVLKSIQEV 9 86 501.79512978437583 1001.5757066355516 2 501.7951537966728 MULTI CID FTMS 0 0 0 7444 224087.546875 0.4658404325998065 -2 0.120849609375 4 Unmodified _SVLKSIQEV_ ENSG00000039123|ENST00000230640|MTREX 26.268140514670165 0.1969607489560049 6 [VS][{M(Oxidation (M))|F}V]{I|L}KQE 8 5 40.596 0.0 0.0 4.0532 0.0 0.0 0.0 68.05140100650624 68.05140100650624 19.041068762089 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 [VS][{M(Oxidation (M))|F}V]{I|L}KQE 4.0532 - 260 + 1 1.541 39809.6 1.0 2119 5327 7444 SUDHL4_400M_050219_2,7448 SUDHL4_400M_050219_2,7448,SVLKSIQEV False True SVLKSIQEV 39.343232 501.795153796673 2317910.0 7444.0 ENSG00000039123|ENST00000230640|MTREX 3.0976803302764893 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7449 39.357 800.0 229820.0 25 0 23705.0 + -1 NMFCTRLSRCF 11 106 754.3319270027895 1506.6493010723789 2 754.3333618044853 MULTI CID FTMS 0 0 0 7444 179054.234375 0.4896243971701992 -3 0.1269989013671875 5 2 Carbamidomethyl (C),Oxidation (M) _NM(Oxidation (M))FC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 8.745405648335112 0.8338865417133445 6 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 90.002 0.0 0.0 5.9736 0.0 0.0 493.22996718574376 0.0 493.22996718574376 0.0 28.872636521980223 0.0 0.0 0 1.9916440611282624 0.0 0.9674165578762486 1.579689690656103 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 5.9736 - 2659 1 1.541 134194.6 0.6399999856948853 2120 5327 7444 SUDHL4_400M_050219_2,7449 SUDHL4_400M_050219_2,7449,NMFCTRLSRCF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7450 39.36 160.0 427340.0 25 0 49103.0 + 44194 YLFLGYLV 8 88 494.2790694088917 986.5435858845832 2 494.2787963747978 MULTI CID FTMS 0 0 0 7444 166744.09375 0.3477235098744332 -9 0.4358596801757812 6 Unmodified _YLFLGYLV_ REV__ENSG00000088836|ENST00000642402|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-1|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-2|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-4|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11 17.086550045450526 0.6584923310065985 6 VV 2 -1 16.37 0.0 0.0 1.6593 0.0 0.0 770.3959093482537 0.0 770.3959093482537 0.0 6.537209583838219 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 VV 1.6593 - 150 + 1 1.541 58203.0 1.0 2121 5327 7444 SUDHL4_400M_050219_2,7450 SUDHL4_400M_050219_2,7450,YLFLGYLV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7451 39.367 386.0 189310.0 25 0 24821.0 23156 LSPWAHGH 8 90 452.7264690075538 903.4383850819077 2 452.7265502810478 MULTI CID FTMS 0 0 0 7444 155048.9375 1.0 0 0.0 7 Unmodified _LSPWAHGH_ ENST00000584438.1_2_17:73282751-73285135:-|nuORF 20.871210003555333 0.6025813472596342 6 {I|L}S 2 6 28.711 0.0 0.0 3.178 0.0 0.0 0.0 700.2996010623208 700.2996010623208 15.21652514092061 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.4247425010840047 0.0 + {I|L}S 3.178 + + 54 + 1 1.541 58656.3 1.0 2122 5327 7444 SUDHL4_400M_050219_2,7451 SUDHL4_400M_050219_2,7451,LSPWAHGH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7452 39.381 800.0 213430.0 25 0 20845.0 -1 0 95 583.3247503443232 1746.9524216331697 3 583.3265258669853 MULTI CID FTMS 0 0 0 7444 102615.359375 1.0 0 0.0 8 6 SQ{I|L}A[PS]P 7 -1 34.028 0.0 0.0 1.9479 0.0 0.0 698.3479968177506 365.2310002331312 1063.5789970508818 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 SQ{I|L}A[PS]P 1.9479 - 458 + 1 1.541 132409.7 0.5 2123 5327 7444 SUDHL4_400M_050219_2,7452 SUDHL4_400M_050219_2,7452, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7453 39.395 800.0 131200.0 25 0 33937.0 -1 0 60 1191.4976315244774 3571.4710651736323 3 1192.168017566204 MULTI CID FTMS 0 0 0 7444 217628.21875 0.8825118927933718 -1 0.0852203369140625 9 6 G 1 -1 6.9897 0.0 0.0 0.19571 0.0 0.0 2147.7558497723057 1363.6795949929106 3511.4354447652163 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.19571 - 45 + 1 1.541 93101.1 0.5600000023841858 2124 5327 7444 SUDHL4_400M_050219_2,7453 SUDHL4_400M_050219_2,7453, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7455 39.4 3.6 13528000.0 25 0 2259800.0 + 9404 FIYRRKYLLQ 10 30 467.2770627530591 1398.8093588593772 3 467.2776977419853 MULTI CID FTMS 0 0 0 7454 10999873.0 0.7519328486135941 1 -0.0163230895996093 1 Unmodified _FIYRRKYLLQ_ REV__ENSG00000077235|ENST00000356183|GTF3C1;REV__nc|ENSG00000077235|Q12789-3|GTF3C1 3.5964929083625545 0.7100006075494749 6 {I|L}AVA 4 -1 30.918 0.0 0.0 2.2103 0.0 0.0 1026.576054462732 0.0 1026.576054462732 0.0 19.948500216800937 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}AVA 2.2103 - 12 1 1.541 46054.6 1.0 2125 5328 7454 SUDHL4_400M_050219_2,7455 SUDHL4_400M_050219_2,7455,FIYRRKYLLQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7456 39.401 15.0 5645000.0 25 0 2140800.0 -1 MRKHRHLPLVA 11 37 700.4113957178429 1398.8082385024857 2 700.4119750857353 MULTI CID FTMS 0 0 0 7454 3469910.5 0.8040546952038522 1 -0.0163230895996093 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MRKHRHLPLVA_ ENSG00000163359|ENST00000295550|COL6A3;nc|ENSG00000163359|P12111-2|COL6A3;nc|ENSG00000163359|P12111-3|COL6A3;nc|ENSG00000163359|P12111-4|COL6A3;nc|ENSG00000163359|P12111-5|COL6A3 5.731851221503515 0.8481046878870278 6 VA 2 -1 20.261 0.0 0.0 1.4484 0.0 0.0 1210.689326655816 0.0 1210.689326655816 0.0 20.260847058321687 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 VA 1.4484 + + 2 1 1.541 66033.0 1.0 2126 5328 7454 SUDHL4_400M_050219_2,7456 SUDHL4_400M_050219_2,7456,MRKHRHLPLVA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7457 39.403 80.0 682690.0 25 0 60604.0 -1 RLTPKLMEV 9 79 551.8180547658252 1101.6215565984503 2 551.8180419802666 MULTI CID FTMS 0 0 0 7454 560762.75 0.3546742609190503 -6 0.2890625 3 Oxidation (M) _RLTPKLM(Oxidation (M))EV_ ENSG00000147677|ENST00000521861|EIF3H 17.11289562659939 0.3734572693229295 6 [R{I|L}]T[KP]{I|L} 6 -1 20.468 0.0 0.0 1.858 0.0 0.0 0.0 390.1325740657017 390.1325740657017 -1.0475750727131512 0.0 -1.0475750727131512 0.0 0 0.3807196863200844 0.9208187539523752 0.3807196863200844 0.0 [R{I|L}]T[KP]{I|L} 1.858 + + 105 1 1.541 45782.6 1.0 2127 5328 7454 SUDHL4_400M_050219_2,7457 SUDHL4_400M_050219_2,7457,RLTPKLMEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7458 39.405 90.0 470260.0 25 0 45861.0 + 1884 ALVVQVAEA 9 83 450.26317690877954 898.5118008843591 2 450.2635375857353 MULTI CID FTMS 0 0 0 7454 530670.375 0.2190195819265946 -7 0.343231201171875 4 Unmodified _ALVVQVAEA_ ENSG00000049860|ENST00000261416|HEXB;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENST00000515528.1_1_5:73981085-73985366:+|nuORF 46.92087301778293 0.0471210510596396 6 [{I|L}A]VVQV 6 3 43.522 0.0 0.0 4.8438 0.0 0.0 0.0 286.1045492576592 286.1045492576592 19.93862361869317 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.2887254899964357 + [{I|L}A]VVQV 4.8438 + + 328 1 1.541 36502.2 1.0 2128 5328 7454 SUDHL4_400M_050219_2,7458 SUDHL4_400M_050219_2,7458,ALVVQVAEA True True ALVVQVAEA 39.404592 450.263537585735 13822502.0 7454.0 ENST00000513079.5_1_5:73981085-74001232:+|nuORF;;ENSG00000049860|ENST00000261416|HEXB;;ENST00000515528.1_1_5:73981085-73985366:+|nuORF 4.053674618403117 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7459 39.411 366.0 177730.0 25 0 28697.0 + 40692 VLFPPPML 8 100 457.2642794489496 912.5140059646992 2 457.2644531130791 MULTI CID FTMS 0 0 0 7454 180858.34375 0.3153642181876199 -17 1.1424484252929688 5 Unmodified _VLFPPPML_ REV__ENSG00000146247|ENST00000275034|PHIP;REV__ENSG00000165288|ENST00000373275|BRWD3;REV__ENSG00000185658|ENST00000342449|BRWD1;REV__nc|ENSG00000165288|Q6RI45-2|BRWD3;REV__nc|ENSG00000165288|Q6RI45-3|BRWD3;REV__nc|ENSG00000165288|Q6RI45-4|BRWD3;REV__nc|ENSG00000165288|Q6RI45-5|BRWD3;REV__nc|ENSG00000185658|Q9NSI6-3|BRWD1;REV__nc|ENSG00000185658|Q9NSI6|BRWD1 2.889219685676258 0.8067950007271085 6 C(Carbamidomethyl (C)) 1 -1 6.9897 0.0 0.0 0.76598 0.0 0.0 554.3857233492679 195.06696497135 749.4526883206179 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.76598 - 2 + 1 1.541 55362.4 1.0 2129 5328 7454 SUDHL4_400M_050219_2,7459 SUDHL4_400M_050219_2,7459,VLFPPPML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7461 39.428 800.0 210060.0 25 0 14752.0 + 32089 RVLPPSALQSV 11 125 583.8477666555467 1165.680980377893 2 583.8477661013603 MULTI CID FTMS 0 0 0 7460 186668.359375 0.8951968975714207 -8 0.3595542907714844 1 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 79.42699986076722 0.0080827643292781 6 [{I|L}V]RP[PS]A{I|L}QSV 11 2 + 62.501 0.0 0.0 5.3617 5.3617 79.427 0.0 0.0 0.0 2.6760624017703094 16.575773191777934 2.6760624017703094 2.6760624017703094 0 1.2302046884880935 0.8239087409443188 0.8494850021680094 0.4247425010840047 [{I|L}V]RP[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}QSV;[{I|L}V]RP[PS]A{I|L}[AG]SV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[{I|L}A]P[PS][RV]{I|L}QSV;[{I|L}V][Y{M(Oxidation (M))|F}]VV{I|L}QSV;[{I|L}V]RP{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[{I|L}V]RP{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV;[{I|L}V]RP[PS]RRW 5.3617;5.1322;4.5786;4.3491;3.7239;2.8587;2.8236;2.5941;2.0374;1.8584 -;+;-;-;-;-;-;-;-;- + 585 1 1.541 127280.4 0.6000000238418579 2130 5329 7460 SUDHL4_400M_050219_2,7461 SUDHL4_400M_050219_2,7461,RVLPPSALQSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7462 39.441 800.0 180300.0 25 0 14555.0 + 43620 YAISKPEVL 9 171 510.2922744135 1018.5699958938 2 510.2915832400322 MULTI CID FTMS 0 0 0 7460 141705.4375 0.943344304338356 -1 0.0163230895996093 2 Unmodified _YAISKPEVL_ ENSG00000181220|ENST00000458143|ZNF746;nc|ENSG00000181220|Q6NUN9-2|ZNF746;nc|ENSG00000181220|Q6NUN9|ZNF746 45.69961567697781 0.0497987121815769 6 YA{I|L}SK[EP]V{I|L} 9 0 + 78.889 0.0 0.0 7.745 7.745 89.954 0.0 0.0 0.0 53.912939259328745 5.694131508470605 5.694131508470605 6.989700043360188 0 1.0941876774005248 2.0 0.7134679910804405 0.0 + + YA{I|L}SK[EP]V{I|L};YA{I|L}SK[EP]{I|L}V;{[TV]|[{I|L}S]}KQKS{I|L}DT;[KS]{I|L}QKS{I|L}DT;{[TV]|[{I|L}S]}K[AG]KS{I|L}DT;[KS]{I|L}[AG]KS{I|L}DT;{[QS]|[NT]}[K{I|L}]KS{I|L}DT;{[QV]|[N{I|L}]|[RA]|[KV]}[KT]KS{I|L}DT;[{I|L}V]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}KS{I|L}DT;[EP]VKS[{M(Oxidation (M))|F}T]V{I|L} 7.745;7.0588;4.3355;4.321;3.4315;3.417;3.2657;2.9651;2.699;1.4243 +;-;-;-;-;-;-;-;-;- + 1756 + 1 1.541 109189.3 0.5899999737739563 2131 5329 7460 SUDHL4_400M_050219_2,7462 SUDHL4_400M_050219_2,7462,YAISKPEVL True True YAISKPEVL 39.441326 510.291583240032 833853.625 7460.0 ENSG00000181220|ENST00000458143|ZNF746;;nc|ENSG00000181220|Q6NUN9-2|ZNF746;;nc|ENSG00000181220|Q6NUN9|ZNF746 6.233436107635498 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7465 39.462 800.0 229400.0 25 0 36726.0 + 9726 FLYDTHQNL 9 132 575.7800657705209 1149.5455786078417 2 575.7798339724541 MULTI CID FTMS 0 0 0 7464 225240.984375 0.6092765818959506 -4 0.1148490905761718 1 Unmodified _FLYDTHQNL_ ENSG00000197943|ENST00000564138|PLCG2 81.89019881105858 0.0170587746866453 6 {M(Oxidation (M))|F}{I|L}YDTHQN{I|L} 9 0 + 67.588 0.0 0.0 5.8795 5.8795 87.943 0.0 0.0 0.0 10.420218178576016 16.208425743278134 10.420218178576016 9.208187539523747 0 0.4247425010840047 0.0 0.6307196863200843 2.0273109370204456 + + {M(Oxidation (M))|F}{I|L}YDTHQN{I|L};{M(Oxidation (M))|F}{I|L}YDTH[AG]N{I|L};{NN|[MP]|[D{I|L}]|[EV]}QC(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F}{I|L}{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}QC(Carbamidomethyl (C)){I|L}PY{I|L}E;{M(Oxidation (M))|F}{I|L}YDTHQGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EC(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F}{I|L}{I|L}E;[HT]DY{I|L}{M(Oxidation (M))|F}{I|L}{I|L}E;[HT]QN[{M(Oxidation (M))|F}V]Y{I|L}E;{[QV]|[N{I|L}]|[RA]|[KV]}EC(Carbamidomethyl (C)){I|L}PY{I|L}E;{NN|[MP]|[D{I|L}]|[EV]}Q[CG]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}E 5.8795;5.0785;4.9731;4.8571;4.8511;4.4838;4.4695;4.4051;4.3678;4.172 +;-;-;-;-;-;-;-;-;- + 3277 + 1 1.538 135496.0 0.9100000262260436 2132 5331 7464 SUDHL4_400M_050219_2,7465 SUDHL4_400M_050219_2,7465,FLYDTHQNL True True FLYDTHQNL 39.461742 575.779833972454 1921392.125 7464.0 ENSG00000197943|ENST00000564138|PLCG2 6.385824044545491 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7466 39.466 202.0 281120.0 25 0 71349.0 + 34327 SLSDTVEKL 9 90 496.26887002546346 990.5231871177268 2 496.2691528201103 MULTI CID FTMS 0 0 0 7464 234207.59375 0.8776540051678073 -3 0.0505523681640625 2 Unmodified _SLSDTVEKL_ ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 45.739877483867886 0.0497104363764649 6 {[TV]|[{I|L}S]}SDTVEK{I|L} 9 0 + 66.085 0.0 0.0 6.6718 6.6718 93.628 0.0 0.0 0.0 55.37192209717617 8.830080363116721 8.830080363116721 21.51023442440469 0 1.3539171939081174 2.0 0.3494850021680094 0.0 + + {[TV]|[{I|L}S]}SDTVEK{I|L};{[TV]|[{I|L}S]}{I|L}{[C(Carbamidomethyl (C))E]|[WC]}EK{I|L};{[TV]|[{I|L}S]}S[C(Carbamidomethyl (C))Q]RK{I|L};{[TV]|[{I|L}S]}S[C(Carbamidomethyl (C))Q][VG]K{I|L};{[TV]|[{I|L}S]}{I|L}[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L}PAA 6.6718;4.5001;3.6386;2.7035;2.5316 +;-;-;-;- + 203 + 1 1.538 49829.6 1.0 2133 5331 7464 SUDHL4_400M_050219_2,7466 SUDHL4_400M_050219_2,7466,SLSDTVEKL True True SLSDTVEKL 39.465584 496.26915282011 1367985.25 7464.0 nc|ENSG00000204843|Q14203-3|DCTN1;;ENSG00000204843|ENST00000628224|DCTN1;;nc|ENSG00000204843|Q14203-4|DCTN1;;nc|ENSG00000204843|Q14203-2|DCTN1;;nc|ENSG00000204843|Q14203-6|DCTN1;;nc|ENSG00000204843|Q14203-5|DCTN1 6.205465316772461 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7468 39.47 19.0 2355200.0 25 0 214230.0 + 42656 VTVPPGPSL 9 69 433.75272576377824 0 433.7525817751884 PEAK CID FTMS 0 0 0 7467 2954617.25 0.6687125773744663 3 -0.0620803833007812 1 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 67.34385681178166 0.0146349057813071 6 P[PG]PS 5 4 16.114 0.0 0.0 1.8619 0.0 0.0 299.1850064532395 128.0722597711547 427.25726622439424 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.548455006504028 0.0 + P[PG]PS 1.8619 + + 163 + 1 1.538 42275.1 1.0 2134 5332 7467 SUDHL4_400M_050219_2,7468 SUDHL4_400M_050219_2,7468,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7469 39.472 52.0 651350.0 25 0 88582.0 -1 0 42 603.9672444161467 1808.87990384864 3 603.9673950076103 MULTI CID FTMS 0 0 0 7467 839567.875 0.596152958564861 5 -0.0852851867675781 2 6 EN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q 7 -1 33.192 0.0 0.0 1.835 0.0 0.0 991.474033342584 0.0 991.474033342584 0.0 27.70766971142507 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 EN{I|L}{[DS]|[MA]|[CV]|TT}{I|L}Q 1.835 - 59 + 1 1.538 31650.3 1.0 2135 5332 7467 SUDHL4_400M_050219_2,7469 SUDHL4_400M_050219_2,7469, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7471 39.487 723.0 131920.0 25 0 12186.0 -1 AVINIKMAV 9 124 487.78999656124176 973.5654401892835 2 487.7906066775322 MULTI CID FTMS 0 0 0 7470 95646.0390625 0.7909315738201609 -10 0.2809219360351562 1 Oxidation (M) _AVINIKM(Oxidation (M))AV_ ENST00000287598.10_1_15:40504760-40504829:+|nuORF 9.347437153973935 0.588369872918737 6 V 1 -1 13.099 0.0 0.0 1.3455 0.0 0.0 856.485894146118 0.0 856.485894146118 0.0 2.917882928169746 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.3455 + + 91 + 1 1.538 75962.4 1.0 2136 5333 7470 SUDHL4_400M_050219_2,7471 SUDHL4_400M_050219_2,7471,AVINIKMAV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7472 39.491 251.0 291050.0 25 0 41058.0 + 9756 FMLTQPHSV 9 94 538.2653370788003 1074.5161212244004 2 538.2654907107353 MULTI CID FTMS 0 0 0 7470 171974.5625 0.2433112233998152 -6 0.1412162780761718 2 Oxidation (M) _FM(Oxidation (M))LTQPHSV_ nc|ENSG00000211640|P01721|IGLV6-57 71.92227651296345 0.0203558744033348 6 {M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TQPH[VS] 9 0 + 67.296 0.0 0.0 6.2629 6.2629 91.327 0.0 0.0 0.0 48.1666739840876 7.751422756077474 7.751422756077474 13.455612550363796 0 0.8807196863200843 0.0 1.7689301784845295 0.4247425010840047 + + {M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TQPH[VS];{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}T[AG]PH[VS];{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}TQ[HS][VP];{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}T[KS][W{M(Oxidation (M))|F}];{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}T[KS]{M(Oxidation (M))|F}[VS];[QP]{[NV]|[RG]}QT{I|L}{M(Oxidation (M))|F}E;[HS][WR]T{I|L}{M(Oxidation (M))|F}E;{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}T[AG][HS][VP];[QP]{[NV]|[RG]}[AG]T{I|L}{M(Oxidation (M))|F}E;{M(Oxidation (M))|F}[YT]PQPH[VS] 6.2629;5.0107;4.798;4.2438;4.0062;3.9275;3.6835;3.5457;3.0705;2.7848 +;-;-;-;-;-;-;-;-;- + 707 + 1 1.538 60416.3 1.0 2137 5333 7470 SUDHL4_400M_050219_2,7472 SUDHL4_400M_050219_2,7472,FMLTQPHSV True False FMLTQPHSV 39.491486 538.265490710735 7604452.5 7470.0 nc|ENSG00000211640|P01721|IGLV6-57 7.120576063791911 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 7474 39.497 179.0 267870.0 25 0 35073.0 + 33613 SIPWLVRS 8 93 479.2775589564674 956.5405649797348 2 479.2782775759697 MULTI CID FTMS 0 0 0 7473 175095.8125 0.7772622601515942 6 -0.1349945068359375 1 Unmodified _SIPWLVRS_ REV__ENST00000594859.5_1_19:18723732-18728463:+|nuORF 2.577480529830294 0.808687252328423 6 V 1 -1 3.0989 0.0 0.0 0.32397 0.0 0.0 619.332784073288 235.11878381900627 854.4515678922943 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.32397 + + 4 + 1 1.538 41374.8 1.0 2138 5334 7473 SUDHL4_400M_050219_2,7474 SUDHL4_400M_050219_2,7474,SIPWLVRS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7475 39.507 537.0 192740.0 25 0 17790.0 + 14010 RLDETIQAI 9 115 529.7962273768513 1057.5779018205026 2 529.7948486208916 MULTI CID FTMS 0 0 0 7473 97103.0234375 0.4740385331960426 -4 0.0501327514648437 2 Unmodified _IAELQPKPY_ ENSG00000103671|ENST00000261884|TRIP4 30.22481116460888 0.1466181017706357 6 [{I|L}A]GA[NS]T{I|L}QA{I|L} 11 9 + 65.385 0.0 0.0 6.1825 6.1825 80.968 0.0 0.0 0.0 6.7401457800355615 16.57577319177794 6.7401457800355615 1.804560644581315 0 1.25 1.2218487496163564 0.4247425010840047 0.0 [{I|L}A]GA[NS]T{I|L}QA{I|L};[{I|L}A]Q[NS]T{I|L}QA{I|L};[{I|L}A]GNSAT{I|L}QA{I|L};{NN|[MP]|[D{I|L}]|[EV]}RET{I|L}QA{I|L};[{I|L}A]GA[NS]T{I|L}[AG]A{I|L};[AG]{I|L}A[NS]T{I|L}QA{I|L};[{I|L}A]Q[NS]T{I|L}[AG]A{I|L};[AG][KQ]ET{I|L}QA{I|L};[{I|L}A]GN{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}QA{I|L};[AG]A{I|L}[NS]T{I|L}QA{I|L} 6.1825;6.0119;5.5557;5.5452;5.3193;5.2006;5.1453;5.0299;4.9293;4.7062 -;-;-;-;-;-;-;-;-;- 1058 1 1.538 81033.7 1.0 2139 5334 7473 SUDHL4_400M_050219_2,7475 SUDHL4_400M_050219_2,7475,IAELQPKPY False False RLDETIQAI 39.506932 529.794848620892 1009891.5 7473.0 ENSG00000103671|ENST00000261884|TRIP4 4.872506459554036 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7476 39.521 800.0 42086.0 25 0 3867.8 -1 0 46 979.1194871604218 2934.3366320814653 3 979.4560424685478 MULTI CID FTMS 0 0 0 7473 70412.2421875 0.5174463680216422 -3 0.0461196899414062 3 6 H 1 -1 6.9897 0.0 0.0 0.2382 0.0 0.0 1759.8047239777527 1034.4635900918263 2794.268314069579 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.2382 - 9 + 1 1.538 34138.4 0.3899999856948852 2140 5334 7473 SUDHL4_400M_050219_2,7476 SUDHL4_400M_050219_2,7476, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7477 39.528 384.0 130320.0 25 0 12251.0 + 27446 PITSPWTTI 9 83 508.274292511737 1014.534032090274 2 508.2748290896416 MULTI CID FTMS 0 0 0 7473 138252.3125 1.0 0 0.0 4 Unmodified _PITSPWTTI_ REV__ENST00000429985.1_1_2:27293569-27294269:-|nuORF 23.1484247019978 0.2366544122328345 6 T{I|L} 2 -1 26.013 0.0 0.0 2.5641 0.0 0.0 782.3913756955459 0.0 782.3913756955459 0.0 12.481427974198454 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 T{I|L} 2.5641 + + 114 + 1 1.538 43753.5 1.0 2141 5334 7473 SUDHL4_400M_050219_2,7477 SUDHL4_400M_050219_2,7477,PITSPWTTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7480 39.538 211.0 295140.0 25 0 64500.0 + 15820 ISGSLICSTM 10 90 506.2455866304549 1010.4766203277098 2 506.2458373904228 MULTI CID FTMS 0 0 0 7479 264066.5 0.2100392362263823 -6 0.0901679992675781 1 Unmodified _ISGSLICSTM_ REV__ENSG00000146147|ENST00000502396|MLIP;REV__ENST00000511744.1_1_6:53976250-54068425:+|nuORF 25.399314129420983 0.3980215340001851 6 {I|L}{I|L}[C(Carbamidomethyl (C))Q]{[YD]|[{M(Oxidation (M))|F}M]}TV 8 -1 + 33.166 0.0 0.0 3.2822 3.2822 71.688 0.0 0.0 0.0 13.459471728614574 4.609178215846654 4.609178215846654 1.7609125905568137 0 0.4247425010840047 2.0 0.3054621874040891 0.0 {I|L}{I|L}[C(Carbamidomethyl (C))Q]{[YD]|[{M(Oxidation (M))|F}M]}TV;{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[C(Carbamidomethyl (C))Q]TV;{I|L}{I|L}[C(Carbamidomethyl (C))Q][YE]SV;{I|L}{I|L}[C(Carbamidomethyl (C))Q]{[YD]|[{M(Oxidation (M))|F}M]}S{I|L};{I|L}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[C(Carbamidomethyl (C))Q]S{I|L} 3.2822;3.1079;2.4818;2.3146;2.1403 -;-;-;-;- 87 + 1 1.538 53458.4 1.0 2142 5336 7479 SUDHL4_400M_050219_2,7480 SUDHL4_400M_050219_2,7480,ISGSLICSTM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7481 39.545 360.0 231780.0 25 0 30641.0 + 2930 AVGVVRFH 8 112 442.7568876550958 883.4992223769916 2 442.7570068240166 MULTI CID FTMS 0 0 0 7479 171102.25 0.6672432499359295 -5 0.0861549377441406 2 Unmodified _AVGVVRFH_ REV__ENSG00000142609|ENST00000682832|CFAP74;REV__nc|ENSG00000142609|Q9C0B2|CFAP74 2.889219685676258 0.8067950007271085 6 R 1 -1 9.7539 0.0 0.0 1.104 0.0 0.0 709.387938052576 0.0 709.387938052576 0.0 7.764209843288903 0.0 0.0 0 0.0 0.0 0.0 0.0 R 1.104 + + 30 + 1 1.538 67874.5 1.0 2143 5336 7479 SUDHL4_400M_050219_2,7481 SUDHL4_400M_050219_2,7481,AVGVVRFH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7482 39.551 350.0 307210.0 25 0 16121.0 -1 RLTPKLMEV 9 144 368.2151030872138 1101.6234798618416 3 368.2153198122978 MULTI CID FTMS 0 0 0 7479 205463.734375 0.8329734673420821 1 -0.01934814453125 3 Oxidation (M) _RLTPKLM(Oxidation (M))EV_ ENSG00000147677|ENST00000521861|EIF3H 19.62595529434964 0.305431704817896 6 [R{I|L}]T[KP]{I|L}[DP]Y 9 -1 + 35.569 0.0 0.0 3.2287 3.2287 72.037 0.0 0.0 0.0 5.123337350737252 9.24742501084005 5.123337350737252 1.989700043360188 0 0.0 1.2218487496163564 0.9247425010840048 0.0 [R{I|L}]T[KP]{I|L}[DP]Y;[R{I|L}]T[KP][VP]EY;[R{I|L}]T[KP]{I|L}{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]} 3.2287;3.0481;2.5699 -;-;+ + 98 1 1.538 98553.0 1.0 2144 5336 7479 SUDHL4_400M_050219_2,7482 SUDHL4_400M_050219_2,7482,RLTPKLMEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7484 39.567 800.0 124790.0 25 0 11602.0 + 32299 ALEEQLQQIRAE 12 102 714.3781668819296 1426.741780830659 2 714.3784667849541 MULTI CID FTMS 0 0 0 7483 88863.125 0.7147370627619984 1 -0.0163764953613281 1 Unmodified _RWSGITRQHMR_ ENSG00000186395|ENST00000269576|KRT10;P13645;P02535-1 14.40537977576856 0.7354982482299568 6 [{I|L}A]EEQ{I|L}QQ{I|L}R{[CP]|[EA]} 12 11 + 105.77 0.0 0.0 7.4136 7.4136 90.731 0.0 0.0 0.0 85.7521226932964 11.214782044987928 11.214782044987928 9.098233696509112 0 1.8169015600442573 2.0 1.2971062485323517 0.75 [{I|L}A]EEQ{I|L}QQ{I|L}R{[CP]|[EA]};[{I|L}A]EE[AG]{I|L}QQ{I|L}R{[CP]|[EA]};[{I|L}A]EEQ{I|L}[AG]Q{I|L}R{[CP]|[EA]};[{I|L}A]EEQ{I|L}Q[AG]{I|L}R{[CP]|[EA]};[{I|L}A]EE[AG]{I|L}[AG]Q{I|L}R{[CP]|[EA]};[{I|L}A]EEQ{I|L}[AG][AG]{I|L}R{[CP]|[EA]};[{I|L}A]EE[AG]{I|L}Q[AG]{I|L}R{[CP]|[EA]};[{I|L}A]EEQ{I|L}QVAAR{[CP]|[EA]};[{I|L}A]EEQ{I|L}[AG]VAAR{[CP]|[EA]};[{I|L}A]EE[AG]{I|L}QVAAR{[CP]|[EA]} 7.4136;6.7759;6.7759;6.7759;6.14;6.14;6.14;6.107;5.4712;5.4712 -;-;-;-;-;-;-;-;-;- 6209 + 1 1.538 74350.0 0.5400000214576721 2145 5337 7483 SUDHL4_400M_050219_2,7484 SUDHL4_400M_050219_2,7484,RWSGITRQHMR False False ALEEQLQQIRAE 39.567248 714.378466784954 527171.0625 7483.0 ENSG00000186395|ENST00000269576|KRT10;;P13645;;P02535-1 6.570072650909424 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7486 39.572 90.0 836340.0 25 0 85948.0 -1 0 71 964.4433002476126 2890.3080713430377 3 964.779833972454 MULTI CID FTMS 0 0 0 7485 444866.125 0.6891907501746007 -2 0.0357246398925781 1 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[RP]SV{M(Oxidation (M))|F}VG 9 -1 39.97 0.0 0.0 1.3829 0.0 0.0 0.0 1883.804201063994 1883.804201063994 21.15951826344685 0.0 0.0 0.0 0 0.5 0.0 0.7059771852360797 1.3807196863200843 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[RP]SV{M(Oxidation (M))|F}VG 1.3829 - 2131 1 1.538 57721.4 1.0 2146 5338 7485 SUDHL4_400M_050219_2,7486 SUDHL4_400M_050219_2,7486, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7487 39.581 494.0 146810.0 25 0 21072.0 -1 ALAPSTMKI 9 123 474.26516376798514 946.5157746027704 2 474.2658264040947 MULTI CID FTMS 0 0 0 7485 65069.05078125 0.1909289302390066 10 -0.3289070129394531 2 Oxidation (M) _ALAPSTM(Oxidation (M))KI_ ENSG00000075624|ENST00000646664|ACTB;ENSG00000107796|ENST00000224784|ACTA2;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000163017|ENST00000345517|ACTG2;ENSG00000184009|ENST00000573283|ACTG1;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2 27.628801355627647 0.1796483985696185 6 [{I|L}A]AA{M(Oxidation (M))|F}[Q{I|L}]T{I|L} 9 -1 + 38.227 0.0 0.0 4.0387 4.0387 73.38 0.0 0.0 0.0 2.2753199220891887 1.4605798642770438 1.4605798642770438 1.4605798642770438 0 1.0317183090963749 1.6989700043360187 0.3807196863200844 0.0 [{I|L}A]AA{M(Oxidation (M))|F}[Q{I|L}]T{I|L};[{I|L}A]APST[KP]Y;[{I|L}A]APST{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};[{I|L}A]APS{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}T{I|L};[{I|L}A]APST[K{I|L}]{M(Oxidation (M))|F};[{I|L}A]AP{[NV]|[RG]}{[TV]|[{I|L}S]}Y;[{I|L}A]APST[YK]P;[{I|L}A]AP{[NV]|[RG]}[YT]V;[RV]A{M(Oxidation (M))|F}[WR]{I|L};[YR][PG][WR]{I|L} 4.0387;3.8844;3.8361;3.518;3.3803;3.3616;3.1069;2.8928;1.434;0.79274 -;-;+;-;-;-;-;-;-;- + 247 + 1 1.538 62252.3 1.0 2147 5338 7485 SUDHL4_400M_050219_2,7487 SUDHL4_400M_050219_2,7487,ALAPSTMKI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7488 39.593 705.0 145090.0 25 0 20667.0 + 9012 FCPPPCVG 8 136 410.1796985842499 818.3448442352998 2 410.1801940798759 MULTI CID FTMS 0 0 0 7485 92141.7890625 0.8052469842365712 -1 0.0163764953613281 3 Unmodified _FCPPPCVG_ REV__ENST00000259006.7_2_17:61775487-61775829:-|nuORF 0.7936320650641473 0.8195151834710337 6 {I|L} 1 -1 9.6777 0.0 0.0 1.1826 0.0 0.0 687.2499936267045 0.0 687.2499936267045 0.0 4.193159988825128 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1826 - 9 + 1 1.538 82324.0 1.0 2148 5338 7485 SUDHL4_400M_050219_2,7488 SUDHL4_400M_050219_2,7488,FCPPPCVG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7489 39.607 800.0 155770.0 25 0 85197.0 45503 YTSAGTYG 8 51 819.3519516685043 818.3446752019042 1 819.3530151247978 MULTI CID FTMS 0 0 0 7485 90479.2734375 0.8874780378564212 -3 0.039581298828125 4 Unmodified _YTSAGTYG_ ENSG00000087338|ENST00000282570|GMCL1 0.7936320650641473 0.8195151834710337 6 N{[YD]|[{M(Oxidation (M))|F}M]} 3 7 8.9524 0.0 0.0 1.094 0.0 0.0 408.19981581855626 0.0 408.19981581855626 0.0 1.962724883926656 0.0 0.0 0 0.0 0.0 0.0 0.0 N{[YD]|[{M(Oxidation (M))|F}M]} 1.094 - 9 1 1.538 93742.8 0.4399999976158142 2149 5338 7485 SUDHL4_400M_050219_2,7489 SUDHL4_400M_050219_2,7489,YTSAGTYG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7491 39.613 86.0 496080.0 25 0 74372.0 -1 HAIPPTLAM 9 63 483.7571500620577 965.4997471909154 2 483.7572814822197 MULTI CID FTMS 0 0 0 7490 540623.5 0.6102695169318866 20 -0.5038871765136719 1 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 24.67388899826682 0.2172451872415813 6 {I|L}AH{I|L}A{M(Oxidation (M))|F} 6 -1 30.846 0.0 0.0 3.1949 0.0 0.0 295.1533375470719 0.0 295.1533375470719 0.0 12.88750309660614 0.0 0.0 0 0.8935078169319297 0.0 0.0 0.0 {I|L}AH{I|L}A{M(Oxidation (M))|F} 3.1949 - 78 1 1.538 40953.4 1.0 2150 5339 7490 SUDHL4_400M_050219_2,7491 SUDHL4_400M_050219_2,7491,HAIPPTLAM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7492 39.626 800.0 146670.0 25 0 12830.0 + -1 NMFCTRLSRCF 11 93 754.3319270027895 1506.6493010723789 2 754.3333007693291 MULTI CID FTMS 0 0 0 7490 121617.140625 0.3325624740008552 9 -0.2893028259277344 2 2 Carbamidomethyl (C),Oxidation (M) _NM(Oxidation (M))FC(Carbamidomethyl (C))TRLSRC(Carbamidomethyl (C))F_ REV__L1PA6_dup1734|chr4:146042272-146048439:-|1.6202719751977472|0.110660677610939|3.87|48.0|281|2|anti-sense 13.042465956692816 0.7638483625850725 6 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 64.703 0.0 0.0 4.2945 0.0 0.0 493.2292347638688 0.0 493.2292347638688 0.0 44.95358466288572 0.0 0.0 0 1.305462187404089 0.0 0.3807196863200844 0.7742275032520141 QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.2945 - 569 1 1.538 86236.2 0.6700000166893005 2151 5339 7490 SUDHL4_400M_050219_2,7492 SUDHL4_400M_050219_2,7492,NMFCTRLSRCF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7494 39.633 181.0 303040.0 25 0 41878.0 + 44331 YLPPATQVV 9 77 494.2790694088917 986.5435858845832 2 494.2790405154228 MULTI CID FTMS 0 0 0 7493 321066.34375 0.669542851206994 4 -0.1841201782226562 1 Unmodified _YLPPATQVV_ ENSG00000141543|ENST00000649764|EIF4A3;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 21.74664581756881 0.2544899275067181 6 {[HG]|PP}ATQY{I|L}VV 9 4 + 44.134 0.0 0.0 4.4736 4.4736 85.028 0.0 0.0 0.0 1.5487980323443935 28.649324917917284 1.5487980323443935 12.095442439488105 0 0.6989700043360187 0.0 0.8807196863200843 0.2887254899964357 {[HG]|PP}ATQY{I|L}VV;{[HG]|PP}AT[AG]Y{I|L}VV;[QT][PA]PY{I|L}VV;[NP][VS]PY{I|L}VV 4.4736;3.2475;2.8629;2.5702 -;-;-;- 159 1 1.538 44585.8 1.0 2152 5340 7493 SUDHL4_400M_050219_2,7494 SUDHL4_400M_050219_2,7494,YLPPATQVV False True YLPPATQVV 39.632526 494.279040515423 5414528.5 7493.0 ENSG00000141543|ENST00000649764|EIF4A3;;ENST00000575978.1_1_17:78112818-78113115:-|nuORF 2.5828521649042764 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7495 39.635 94.0 588340.0 25 0 49327.0 + -1 LIDLCIPCI 9 68 530.2803422926582 1058.5461316521164 2 530.2805663943291 MULTI CID FTMS 0 0 0 7493 328482.8125 0.8190118236214995 -2 0.059234619140625 2 Carbamidomethyl (C) _LIDLC(Carbamidomethyl (C))IPCI_ REV__ENSG00000204616|ENST00000376734|TRIM31;REV__nc|ENSG00000204616|Q9BZY9-2|TRIM31 12.531546534597751 0.4974689918368763 6 VH{M(Oxidation (M))|F}W 4 -1 37.805 0.0 0.0 3.5714 0.0 0.0 471.2433511619902 0.0 471.2433511619902 0.0 19.51712749865728 0.0 0.0 0 0.5866968715561641 0.0 0.0 0.0 VH{M(Oxidation (M))|F}W 3.5714 - 81 1 1.538 48367.5 1.0 2153 5340 7493 SUDHL4_400M_050219_2,7495 SUDHL4_400M_050219_2,7495,LIDLCIPCI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7496 39.639 225.0 276610.0 25 0 30896.0 + -1 RMISEELVAA 10 74 567.7943865276627 1133.574220122125 2 567.7947265505791 MULTI CID FTMS 0 0 0 7493 268391.21875 0.485521502135815 -2 0.059234619140625 3 Oxidation (M) _RM(Oxidation (M))ISEELVAA_ ENST00000473880.5_1_7:102106264-102108393:+|nuORF;ENSG00000161036|ENST00000292616|LRWD1 22.65808497894818 0.4596126414678359 6 TSEE{I|L}VAA 8 -1 45.61 0.0 0.0 4.0236 0.0 0.0 315.17976576972814 0.0 315.17976576972814 0.0 17.193962872398032 0.0 0.0 0 1.024227503252014 0.0 0.3252574989159953 0.0 TSEE{I|L}VAA 4.0236 - 102 1 1.538 57641.0 1.0 2154 5340 7493 SUDHL4_400M_050219_2,7496 SUDHL4_400M_050219_2,7496,RMISEELVAA False False RMISEELVAA 39.638841 567.794726550579 5140399.5 7493.0 ENST00000473880.5_1_7:102106264-102108393:+|nuORF;;ENSG00000161036|ENST00000292616|LRWD1 8.025622208913168 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7498 39.655 800.0 112830.0 25 0 14410.0 -1 0 73 905.447377064828 1808.880201196456 2 905.9501220583916 MULTI CID FTMS 0 0 0 7497 82338.765625 0.1999139369617645 13 -0.364654541015625 1 6 [H{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H 5 -1 25.558 0.0 0.0 1.4129 0.0 0.0 0.0 1159.5235079401002 1159.5235079401002 2.3708934260475445 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.4247425010840047 [H{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}H 1.4129 - 111 + 1 1.538 64729.5 0.4199999868869781 2155 5341 7497 SUDHL4_400M_050219_2,7498 SUDHL4_400M_050219_2,7498, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7499 39.663 464.0 262940.0 25 0 36520.0 + 44156 YLDPRITVA 9 124 524.2953750810059 1046.5761972288117 2 524.2978393435478 MULTI CID FTMS 0 0 0 7497 134459.78125 0.154950961213796 -4 0.0879745483398437 2 Unmodified _YLDPRITVA_ ENSG00000198900|ENST00000361337|TOP1 41.8396318013385 0.0653578398400075 6 Y{I|L}D 3 6 49.922 0.0 0.0 4.77 0.0 0.0 0.0 652.3790826857648 652.3790826857648 22.89922491778533 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + Y{I|L}D 4.77 + + 660 + 1 1.538 96011.7 1.0 2156 5341 7497 SUDHL4_400M_050219_2,7499 SUDHL4_400M_050219_2,7499,YLDPRITVA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7500 39.677 800.0 147490.0 25 0 14070.0 + 16591 KDNKYLSVK 9 113 547.8135604105187 1093.6125678878373 2 547.8146240115166 MULTI CID FTMS 0 0 0 7497 96304.3515625 0.8993692282156466 2 -0.1402931213378906 3 Unmodified _KDNKYLSVK_ REV__CON__Q3Y5Z3 40.23920728925047 0.0741434193262949 6 [KS]V[NG]Y{I|L}S 8 -1 47.44 0.0 0.0 4.3379 0.0 0.0 0.0 242.1504496446168 242.1504496446168 36.020113801342944 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.7742275032520141 0.3807196863200844 [KS]V[NG]Y{I|L}S 4.3379 - 286 1 1.538 93445.5 0.5199999809265137 2157 5341 7497 SUDHL4_400M_050219_2,7500 SUDHL4_400M_050219_2,7500,KDNKYLSVK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7501 39.69 703.0 270810.0 25 0 28515.0 + 37791 TLSEVTNQL 9 161 502.7662995781122 1003.5180462230244 2 502.7655517458916 MULTI CID FTMS 0 0 0 7497 90205.0 0.1089073452996997 -4 0.0879745483398437 4 Unmodified _TLSEVTNQL_ ENSG00000170145|ENST00000304987|SIK2 81.61307344734483 0.0171259190214613 6 [{I|L}T]SEVTNQ{I|L} 9 0 + 55.392 0.0 0.0 5.5197 5.5197 83.161 0.0 0.0 0.0 13.9547415403268 13.961120354980622 13.9547415403268 5.9247782126794775 0 0.4802046884880938 2.0 1.909097005026964 0.5 + + [{I|L}T]SEVTNQ{I|L};[{I|L}T]SD{I|L}TNQ{I|L};[{I|L}T]{[WT]|[RM]}ENQ{I|L};[{I|L}T]S{[TV]|[{I|L}S]}ENQ{I|L};[{I|L}T]SEVTGGQ{I|L};[{I|L}T]{[WT]|[RM]}EGGQ{I|L};[{I|L}T]SD{I|L}TGGQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}ST{I|L}TNQ{I|L};[VS]ET{I|L}TNQ{I|L};{[TV]|[{I|L}S]}DT{I|L}TNQ{I|L} 5.5197;4.9293;4.5149;4.4972;4.1039;3.5919;3.5135;3.2977;3.2642;3.2445 +;-;-;-;-;-;-;-;-;- + 2463 1 1.538 146042.0 1.0 2158 5341 7497 SUDHL4_400M_050219_2,7501 SUDHL4_400M_050219_2,7501,TLSEVTNQL True True TLSEVTNQL 39.689501 502.765551745892 8624307.0 7497.0 ENSG00000170145|ENST00000304987|SIK2 5.6132659912109375 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7503 39.695 43.0 799950.0 25 0 81868.0 + 1885 ALVVQVAEA 9 76 450.26317690877954 898.5118008843591 2 450.2634765505791 MULTI CID FTMS 0 0 0 7502 947905.625 0.3912219401608152 7 -0.2304115295410156 1 Unmodified _ALVVQVAEA_ ENSG00000049860|ENST00000261416|HEXB;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENST00000515528.1_1_5:73981085-73985366:+|nuORF 32.116972079565 0.1225432171549407 6 [{I|L}A]AAA{I|L} 6 6 32.853 0.0 0.0 3.6564 0.0 0.0 0.0 385.1724813865654 385.1724813865654 9.89454989793387 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A]AAA{I|L} 3.6564 - 218 1 1.538 32780.8 1.0 2159 5342 7502 SUDHL4_400M_050219_2,7503 SUDHL4_400M_050219_2,7503,ALVVQVAEA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7504 39.698 156.0 377110.0 25 0 31484.0 -1 RLTPKLMEV 9 74 551.8180547658252 1101.6215565984503 2 551.8181640505791 MULTI CID FTMS 0 0 0 7502 358911.21875 0.2270061113112663 8 -0.2548484802246094 2 Oxidation (M) _RLTPKLM(Oxidation (M))EV_ ENSG00000147677|ENST00000521861|EIF3H 16.149105407346934 0.3995459350917656 6 TEY 3 -1 30.445 0.0 0.0 2.7637 0.0 0.0 690.4538836643475 0.0 690.4538836643475 0.0 13.450528104279016 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 TEY 2.7637 - 54 1 1.538 50056.3 1.0 2160 5342 7502 SUDHL4_400M_050219_2,7504 SUDHL4_400M_050219_2,7504,RLTPKLMEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7505 39.7 99.0 458990.0 25 0 84153.0 + 31375 RNVSPVNK 8 69 457.2642794489496 912.5140059646992 2 457.2643920779228 MULTI CID FTMS 0 0 0 7502 558357.375 0.9736124603660524 -3 0.0826492309570312 3 Unmodified _RNVSPVNK_ REV__ENSG00000176853|ENST00000334705|FAM91A1 4.75600775471527 0.7954636275367004 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.538 40001.6 1.0 2161 5342 7502 SUDHL4_400M_050219_2,7505 SUDHL4_400M_050219_2,7505,RNVSPVNK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7506 39.702 96.0 640610.0 25 0 113050.0 + 15048 ILYEPLVL 8 83 480.29233179726464 958.5701106613292 2 480.2928039431572 MULTI CID FTMS 0 0 0 7502 452277.5 0.1422720127387443 -3 0.0826492309570312 4 Unmodified _ILYEPLVL_ REV__ENSG00000100528|ENST00000216416|CNIH1;REV__ENST00000554683.1_1_14:54894534-54903393:-|nuORF 19.438996006549623 0.6237395211498085 6 [{I|L}T]DTKG[{I|L}V]{I|L} 9 -1 + 44.72 0.0 0.0 4.6653 4.6653 86.244 0.0 0.0 0.0 12.286881741466615 21.73902187720806 12.286881741466615 15.070844780971054 0 0.0 1.154901959985743 1.110924374808178 0.0 [{I|L}T]DTKG[{I|L}V]{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}TKG[{I|L}V]{I|L};[VG]HHKG[{I|L}V]{I|L} 4.6653;3.093;2.3307 -;-;- 148 1 1.538 52219.6 1.0 2162 5342 7502 SUDHL4_400M_050219_2,7506 SUDHL4_400M_050219_2,7506,ILYEPLVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7507 39.705 168.0 292710.0 25 0 52381.0 + 33756 SLAPGERMY 9 64 512.251227282416 1022.487901631632 2 512.2508422732353 MULTI CID FTMS 0 0 0 7502 283900.6875 0.399302224919549 -3 0.0826492309570312 5 Unmodified _SLAPGERMY_ ENST00000373044.2_1_1:38269292-38269487:-|nuORF 13.90604991867851 0.4602628045680013 6 {[TV]|[{I|L}S]}A 3 6 39.705 0.0 0.0 3.8832 0.0 0.0 0.0 748.313452914064 748.313452914064 27.715299873086607 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + {[TV]|[{I|L}S]}A 3.8832 + + 56 + 1 1.538 43955.1 1.0 2163 5342 7502 SUDHL4_400M_050219_2,7507 SUDHL4_400M_050219_2,7507,SLAPGERMY False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7508 39.715 537.0 248880.0 25 0 82540.0 + 40914 VLSIRKHQYKQ 11 77 700.4113957178429 1398.8082385024857 2 700.4120361208916 MULTI CID FTMS 0 0 0 7502 137762.640625 0.031922638355719 15 -0.3741874694824219 6 Unmodified _VLSIRKHQYKQ_ REV__ENSG00000214960|ENST00000407010|CRPPA;REV__nc|ENSG00000214960|A4D126-2|CRPPA 3.2813086475875832 0.8596665074481906 6 Q 1 -1 11.783 0.0 0.0 0.84234 0.0 0.0 1252.7385954134215 0.0 1252.7385954134215 0.0 -3.790457282273376 -3.790457282273376 0.0 0 0.0 0.0 0.0 0.0 Q 0.84234 + + 10 + 1 1.538 99426.3 1.0 2164 5342 7502 SUDHL4_400M_050219_2,7508 SUDHL4_400M_050219_2,7508,VLSIRKHQYKQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7509 39.728 800.0 189290.0 25 0 16637.0 + 1888 ALWEDEGVRA 10 125 573.2841824391932 1144.5538119451862 2 573.2828246951103 MULTI CID FTMS 0 0 0 7502 130271.546875 0.528633621877957 -2 0.063018798828125 7 Unmodified _ALWEDEGVRA_ ENSG00000087460|ENST00000371085|GNAS;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;ENST00000494081.5_1_20:57478601-57480533:+|nuORF;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;nc|ENSG00000087460|P63092-2|GNAS;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-4|GNAS;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS 49.55428908609986 0.0827668555218455 6 [{I|L}A]ADEDEGV{[QV]|[N{I|L}]|[RA]|[KV]} 11 2 + 77.203 0.0 0.0 6.7453 6.7453 82.426 0.0 0.0 0.0 58.02224552110079 13.604710706454412 13.604710706454412 1.8045606445813007 0 0.7742275032520141 1.6989700043360187 0.805462187404089 0.6237125054200234 [{I|L}A]ADEDEGV{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]WEDEGV{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]ADE[WD]V{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]ADAEDDV{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]ADEADDV{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A][NS]NDEGV{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]WE[WD]V{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]WAEDDV{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]WEADDV{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]AD[NS][DG]GV{[QV]|[N{I|L}]|[RA]|[KV]} 6.7453;6.5876;4.7259;4.6951;4.6951;4.6279;4.572;4.5375;4.5375;4.3144 -;+;-;-;-;-;-;-;-;- + 1205 + 1 1.538 115284.2 0.5799999833106995 2165 5342 7502 SUDHL4_400M_050219_2,7509 SUDHL4_400M_050219_2,7509,ALWEDEGVRA True True ALWEDEGVRA 39.728466 573.28282469511 1187505.125 7502.0 ENST00000494081.5_1_20:57478601-57480533:+|nuORF;;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;;nc|ENSG00000087460|Q5JWF2-2|GNAS;;nc|ENSG00000087460|Q5JWF2|GNAS;;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;;nc|ENSG00000087460|P63092-3|GNAS;;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;;ENST00000487981.5_1_20:57478601-57484479:+|nuORF;;nc|ENSG00000087460|P63092-2|GNAS;;nc|ENSG00000087460|P63092-4|GNAS;;ENSG00000087460|ENST00000371085|GNAS 7.720368226369222 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7510 39.739 599.0 278270.0 25 0 19286.0 + 20279 LLDRGKLQV 9 184 521.324105087879 1040.633657242558 2 521.3242065310478 MULTI CID FTMS 0 0 0 7502 122789.78125 0.6614378160770069 -2 0.063018798828125 8 Unmodified _LLDRGKLQV_ REV__ENSG00000036473|ENST00000039007|OTC 43.85829265575387 0.0542763391141878 6 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}K{I|L}{I|L}QV 9 -1 + 48.497 0.0 0.0 4.6603 4.6603 83.63 0.0 0.0 0.0 5.228113589426791 30.79556171418449 5.228113589426791 9.208187539523747 0 0.9489700043360187 0.6575773191777937 0.5356668758921829 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}K{I|L}{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}{[NV]|[RG]}K{I|L}{I|L}[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}R[VS]{I|L}{I|L}QV;[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}{I|L}QV;{[DA]|[EG]}[RV]K{I|L}{I|L}QV;{[QV]|[N{I|L}]|[RA]|[KV]}R[VS]{I|L}{I|L}[AG]V;{[QG]|[NA]}[KQ]K{I|L}{I|L}QV;[{I|L}A]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}{I|L}[AG]V;{[HG]|PP}[{I|L}V]Y{I|L}{I|L}QV;{[DA]|[EG]}[RV]K{I|L}{I|L}[AG]V 4.6603;3.7755;3.7392;3.4513;2.9128;2.8543;2.7005;2.5665;2.1382;2.028 -;-;-;-;-;-;-;-;-;- 753 1 1.538 128000.7 1.0 2166 5342 7502 SUDHL4_400M_050219_2,7510 SUDHL4_400M_050219_2,7510,LLDRGKLQV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7511 39.748 503.0 198940.0 25 0 18277.0 + -1 IVMKQSQEL 9 141 546.2929953918824 1090.5714378505647 2 546.2924072146416 MULTI CID FTMS 0 0 0 7502 131405.96875 0.4665137799922961 -3 0.0826492309570312 9 Oxidation (M) _IVM(Oxidation (M))KQSQEL_ REV__ENSG00000122483|ENST00000690025|CCDC18;REV__nc|ENSG00000122483|Q5T9S5-2|CCDC18;REV__nc|ENSG00000122483|Q5T9S5|CCDC18 36.04419817259434 0.0971720506436186 6 [{I|L}V]{M(Oxidation (M))|F}WRE{[QN]|[E{I|L}]|[KN]} 8 -1 + 48.121 0.0 0.0 4.4125 4.4125 79.282 0.0 0.0 0.0 11.452380829866826 5.747738739716951 5.747738739716951 5.747738739716951 0 0.8807196863200843 2.0 0.2614393726401688 0.3054621874040891 [{I|L}V]{M(Oxidation (M))|F}WRE{[QN]|[E{I|L}]|[KN]};[{I|L}V]{M(Oxidation (M))|F}WRQEN;[{I|L}V]{M(Oxidation (M))|F}W[KG]VEN;[{I|L}V]{M(Oxidation (M))|F}{[DA]|[EG]}RE{[QN]|[E{I|L}]|[KN]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DV{I|L}QVEN;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DV{I|L}VE{[QN]|[E{I|L}]|[KN]};[{I|L}V]{M(Oxidation (M))|F}WR[AG]EN;[DV]Q{M(Oxidation (M))|F}{I|L}VE{[QN]|[E{I|L}]|[KN]};[{I|L}V]{M(Oxidation (M))|F}{[DA]|[EG]}[KG]VEN;[DV]K{M(Oxidation (M))|F}{I|L}QVEN 4.4125;3.8855;3.8631;3.5632;3.3624;3.0624;3.0362;3.0286;3.0188;3.0056 -;-;-;-;-;-;-;-;-;- 5525 1 1.538 81917.5 1.0 2167 5342 7502 SUDHL4_400M_050219_2,7511 SUDHL4_400M_050219_2,7511,IVMKQSQEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7512 39.756 491.0 159980.0 25 0 17473.0 + 33716 SKSTGKSI 8 141 404.23170533050666 806.4488577278133 2 404.2326537966728 MULTI CID FTMS 0 0 0 7502 124750.7578125 1.0 0 0.0 10 Unmodified _SKSTGKSI_ REV__ENST00000416249.1_1_10:112629578-112631155:+|nuORF 12.531546534597751 0.7257836412119636 6 P 1 -1 10.837 0.0 0.0 1.3438 0.0 0.0 691.3850816431438 0.0 691.3850816431438 0.0 5.77578676110019 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.3438 - 18 + 1 1.538 64048.8 1.0 2168 5342 7502 SUDHL4_400M_050219_2,7512 SUDHL4_400M_050219_2,7512,SKSTGKSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7513 39.771 800.0 110030.0 25 0 8456.3 + 32090 RVLPPSALQSV 11 99 583.8477666555467 1165.680980377893 2 583.8486205935478 MULTI CID FTMS 0 0 0 7502 111063.1953125 0.5326206766428263 5 -0.1679573059082031 11 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 79.42699986076722 0.0080827643292781 6 [RV]{I|L}P[PS]A{I|L}QSV 11 0 + 64.377 0.0 0.0 5.5227 5.5227 85.642 0.0 0.0 0.0 4.357285695614365 48.48675009586374 4.357285695614365 9.128498242810991 0 1.5941876774005248 0.0 0.8494850021680094 0.0 + + [RV]{I|L}P[PS]A{I|L}QSV;[RV]{I|L}P[PS]A{I|L}[AG]SV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}QDV;[RV]{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[AG]DV 5.5227;4.7396;2.7785;1.9923 +;-;-;- + 204 1 1.538 71778.2 0.5299999713897705 2169 5342 7502 SUDHL4_400M_050219_2,7513 SUDHL4_400M_050219_2,7513,RVLPPSALQSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7514 39.779 428.0 119440.0 25 0 10393.0 + -1 IACVSCYDSV 10 90 558.7382539674788 1115.4619550017576 2 558.7375366091728 MULTI CID FTMS 0 0 0 7502 131112.8125 1.0 0 0.0 12 Carbamidomethyl (C) _IAC(Carbamidomethyl (C))VSCYDSV_ REV__ENST00000391942.6_1_19:45854889-45865127:-|nuORF 11.640296217721598 0.652229146672156 6 SV 2 -1 16.186 0.0 0.0 1.451 0.0 0.0 911.3508080064436 0.0 911.3508080064436 0.0 5.216525140920609 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 SV 1.451 + + 88 + 1 1.538 47199.4 1.0 2170 5342 7502 SUDHL4_400M_050219_2,7514 SUDHL4_400M_050219_2,7514,IACVSCYDSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7516 39.785 62.0 712250.0 25 0 49853.0 + 42657 VTVPPGPSL 9 81 433.75272576377824 0 433.7527343630791 PEAK CID FTMS 0 0 0 7515 634897.25 0.1436950171517007 14 -0.2845497131347656 1 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 54.773552608820026 0.0223190572393154 6 PP[TA]E 5 7 12.167 0.0 0.0 1.4058 0.0 0.0 299.1839660765815 68.0512941949828 367.2352602715643 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1989700043360187 0.0 PP[TA]E 1.4058 - 60 + 1 1.538 40622.7 1.0 2171 5343 7515 SUDHL4_400M_050219_2,7516 SUDHL4_400M_050219_2,7516,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7517 39.791 333.0 157510.0 25 0 18022.0 -1 FMLTQPHSV 9 91 538.2653370788003 1074.5161212244004 2 538.2657348513603 MULTI CID FTMS 0 0 0 7515 105181.7421875 0.1488121149949986 4 -0.0783195495605468 2 Oxidation (M) _FM(Oxidation (M))LTQPHSV_ nc|ENSG00000211640|P01721|IGLV6-57 24.020572477871973 0.2255576514309169 6 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[QT]PH[VS] 9 -1 + 26.219 0.0 0.0 2.44 2.44 82.438 0.0 0.0 0.0 3.186362358410125 0.314528456073976 0.314528456073976 26.21864122323871 0 0.5 0.0 1.1307196863200843 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[QT]PH[VS] 2.44 + + 85 + 1 1.538 44401.1 1.0 2172 5343 7515 SUDHL4_400M_050219_2,7517 SUDHL4_400M_050219_2,7517,FMLTQPHSV False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 7518 39.793 102.0 414020.0 25 0 46841.0 -1 0 53 603.9672444161467 1808.87990384864 3 603.9677001833916 MULTI CID FTMS 0 0 0 7515 424588.0 0.3014877056499299 16 -0.3316001892089844 3 6 {I|L}Q 2 -1 27.831 0.0 0.0 1.5386 0.0 0.0 1549.7268104421933 0.0 1549.7268104421933 0.0 7.585236952414931 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 {I|L}Q 1.5386 - 40 + 1 1.538 39970.6 1.0 2173 5343 7515 SUDHL4_400M_050219_2,7518 SUDHL4_400M_050219_2,7518, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7519 39.795 106.0 412350.0 25 0 55666.0 + -1 AMWEHPITA 9 83 536.2499714858307 1070.4853900384612 2 536.2507202029228 MULTI CID FTMS 0 0 0 7515 320041.53125 0.3303477193998361 -5 0.2118911743164062 4 Oxidation (M) _AM(Oxidation (M))WEHPITA_ nc|ENSG00000138621|Q96CD2-2|PPCDC;ENSG00000138621|ENST00000342932|PPCDC 20.453626601364224 0.2830276176381075 6 [{I|L}P][TA]H[W{M(Oxidation (M))|F}]{[CP]|[EA]} 9 -1 + 13.067 0.0 0.0 1.2207 1.2207 73.476 0.0 0.0 0.0 3.152591373121133 -15.740312677277188 -15.740312677277188 5.216525140920609 0 0.4247425010840047 1.2218487496163564 0.0 0.0 [{I|L}P][TA]H[W{M(Oxidation (M))|F}]{[CP]|[EA]};{[YC]|[HE]}W{[MS]|[{M(Oxidation (M))|F}A]}[{I|L}P][TA] 1.2207;0.7334 -;- 110 1 1.538 40616.8 1.0 2174 5343 7515 SUDHL4_400M_050219_2,7519 SUDHL4_400M_050219_2,7519,AMWEHPITA False False AMWEHPITA 39.795048 536.250720202923 4938637.0 7515.0 nc|ENSG00000138621|Q96CD2-2|PPCDC;;ENSG00000138621|ENST00000342932|PPCDC 7.333589235941569 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7520 39.803 475.0 191250.0 25 0 23182.0 + -1 NMWPWHKVNMF 11 72 761.3408744593083 1520.6671959854166 2 761.3412963747978 MULTI CID FTMS 0 0 0 7515 164296.0 0.8026108080154646 -2 0.1402931213378906 5 2 Oxidation (M) _NM(Oxidation (M))WPWHKVNM(Oxidation (M))F_ REV__ENSG00000006788|ENST00000252172|MYH13 9.38312468134398 0.8308777417566128 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NE[QA]R[DG]{M(Oxidation (M))|F} 13 -1 + 58.268 0.0 0.0 3.8317 3.8317 86.208 0.0 0.0 0.0 47.00871253263768 1.1229235946327094 1.1229235946327094 58.26777239760668 0 0.7887254899964358 0.0 0.3807196863200844 1.1549471895720984 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NE[QA]R[DG]{M(Oxidation (M))|F} 3.8317 - 157 + 1 1.538 67641.1 1.0 2175 5343 7515 SUDHL4_400M_050219_2,7520 SUDHL4_400M_050219_2,7520,NMWPWHKVNMF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7521 39.811 397.0 188060.0 25 0 24093.0 + 43920 YGGLTSLL 8 117 412.2308343210505 822.447115708901 2 412.2307617068291 MULTI CID FTMS 0 0 0 7515 155246.78125 0.9011380459464772 -9 0.2876510620117187 6 Unmodified _YGGLTSLL_ REV__ENSG00000153982|ENST00000284116|GDPD1;REV__nc|ENSG00000153982|Q8N9F7-2|GDPD1;REV__nc|ENSG00000153982|Q8N9F7-3|GDPD1 2.889219685676258 0.8067950007271085 6 {M(Oxidation (M))|F} 1 -1 9.464 0.0 0.0 1.1507 0.0 0.0 657.3680884645636 0.0 657.3680884645636 0.0 0.1316446936117454 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1507 - 18 + 1 1.538 63775.5 1.0 2176 5343 7515 SUDHL4_400M_050219_2,7521 SUDHL4_400M_050219_2,7521,YGGLTSLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7523 39.816 131.0 370680.0 25 0 80527.0 + 15821 ISGSLICSTM 10 74 506.2455866304549 1010.4766203277098 2 506.2458984255791 MULTI CID FTMS 0 0 0 7522 379384.5625 0.3017635472260973 2 -0.023345947265625 1 Unmodified _ISGSLICSTM_ REV__ENSG00000146147|ENST00000502396|MLIP;REV__ENST00000511744.1_1_6:53976250-54068425:+|nuORF 25.399314129420983 0.3980215340001851 6 {I|L}{I|L}G 3 -1 23.557 0.0 0.0 2.3312 0.0 0.0 0.0 724.2642234373379 724.2642234373379 5.809159218443796 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}G 2.3312 - 49 1 1.538 44719.5 1.0 2177 5344 7522 SUDHL4_400M_050219_2,7523 SUDHL4_400M_050219_2,7523,ISGSLICSTM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7524 39.818 127.0 405600.0 25 0 35712.0 18594 LADPEVLK 8 84 442.7568876550958 883.4992223769916 2 442.7568847537041 MULTI CID FTMS 0 0 0 7522 237986.3125 0.9280693888757612 3 -0.0468559265136718 2 Unmodified _LADPEVLK_ ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-5|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;nc|ENSG00000080802|O95628|CNOT4 8.593279151180031 0.7721714526254883 6 {I|L} 1 7 10.713 0.0 0.0 1.2126 0.0 0.0 752.404295474451 0.0 752.404295474451 0.0 4.999999999999998 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2126 + + 75 + 1 1.538 44182.3 1.0 2178 5344 7522 SUDHL4_400M_050219_2,7524 SUDHL4_400M_050219_2,7524,LADPEVLK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7526 39.823 106.0 555590.0 25 0 60444.0 + 34817 SQFGTVTRF 9 83 521.7695794095097 1041.5246058858193 2 521.7696411013603 MULTI CID FTMS 0 0 0 7525 426966.96875 0.2091310361793457 -7 0.2511711120605469 1 Unmodified _SQFGTVTRF_ ENSG00000155438|ENST00000285814|NIFK;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 51.629811660486645 0.0367964933207742 6 {[QS]|[NT]}{M(Oxidation (M))|F}GTV 6 3 44.001 0.0 0.0 4.2247 0.0 0.0 0.0 419.2052401178344 419.2052401178344 30.90243520346717 0.0 0.0 0.0 0 0.5 1.154901959985743 0.3807196863200844 0.0 + {[QS]|[NT]}{M(Oxidation (M))|F}GTV 4.2247 + + 118 + 1 1.538 53120.6 1.0 2179 5345 7525 SUDHL4_400M_050219_2,7526 SUDHL4_400M_050219_2,7526,SQFGTVTRF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7527 39.834 615.0 148660.0 25 0 9961.5 11855 GLSKTAKRN 9 134 487.78999656124176 973.5654401892835 2 487.7907897830009 MULTI CID FTMS 0 0 0 7525 69768.5390625 0.576941198451278 2 -0.0390396118164062 2 Unmodified _GLSKTAKRN_ ENSG00000170473|ENST00000408946|PYM1;nc|ENSG00000170473|Q9BRP8-2|PYM1 11.640296217721598 0.521594087909532 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q 3 8 19.666 0.0 0.0 2.02 0.0 0.0 0.0 608.3722693731304 608.3722693731304 7.191512336730035 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q 2.02 - 171 1 1.538 75074.7 1.0 2180 5345 7525 SUDHL4_400M_050219_2,7527 SUDHL4_400M_050219_2,7527,GLSKTAKRN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7529 39.844 318.0 263450.0 25 0 18340.0 -1 0 88 964.4433002476126 2890.3080713430377 3 964.7791015505792 MULTI CID FTMS 0 0 0 7528 227871.4375 0.3530205563617361 6 -0.1349639892578125 1 6 E[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 5 -1 15.726 0.0 0.0 0.54408 0.0 0.0 2289.0375730334536 0.0 2289.0375730334536 0.0 -1.0664393925764983 -1.0664393925764983 0.0 0 0.5 0.0 0.0 0.4247425010840047 E[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 0.54408 - 808 1 1.538 62798.3 1.0 2181 5346 7528 SUDHL4_400M_050219_2,7529 SUDHL4_400M_050219_2,7529, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7530 39.857 800.0 124490.0 25 0 9907.3 + 28169 PPTAITIQ 8 147 420.7436846625215 839.4728163918429 2 420.7434265017509 MULTI CID FTMS 0 0 0 7528 99620.6875 1.0 0 0.0 2 Unmodified _PPTAITIQ_ REV__ENSG00000106868|ENST00000374270|SUSD1;REV__nc|ENSG00000106868|Q6UWL2-2|SUSD1;REV__nc|ENSG00000106868|Q6UWL2-3|SUSD1 2.302733041254933 0.8103549651115762 6 {I|L} 1 -1 8.2488 0.0 0.0 0.98261 0.0 0.0 708.3781031123492 0.0 708.3781031123492 0.0 0.2899597348884342 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.98261 + + 21 + 1 1.538 82925.5 0.4300000071525574 2182 5346 7528 SUDHL4_400M_050219_2,7530 SUDHL4_400M_050219_2,7530,PPTAITIQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7532 39.864 234.0 309710.0 25 0 35569.0 + 44164 YLDPVQRDL 9 79 559.7955653771257 1117.5765778210514 2 560.2969848513603 MULTI CID FTMS 0 0 0 7531 144430.171875 0.2878078663587095 -5 0.1679573059082031 1 Unmodified _YLDPVQRDL_ ENST00000467680.5_1_7:99159903-99161679:+|nuORF;nc|ENSG00000197343|Q8N720-2|ZNF655 29.84058131909904 0.1515068451768857 6 [Y{I|L}]DPVQR{NN|[MP]|[D{I|L}]|[EV]} 9 0 + 59.944 0.0 0.0 5.3637 5.3637 86.22 0.0 0.0 0.0 47.179746418130826 5.871280189675971 5.871280189675971 9.208187539523747 0 0.9247425010840048 2.0 0.2614393726401688 0.0 + + [Y{I|L}]DPVQR{NN|[MP]|[D{I|L}]|[EV]};[Y{I|L}]DPV[AG]R{NN|[MP]|[D{I|L}]|[EV]};[Y{I|L}]D{I|L}[NP]R{NN|[MP]|[D{I|L}]|[EV]} 5.3637;4.5398;4.483 +;-;- + 77 + 1 1.538 59237.7 1.0 2183 5347 7531 SUDHL4_400M_050219_2,7532 SUDHL4_400M_050219_2,7532,YLDPVQRDL False True YLDPVQRDL 39.864392 560.29698485136 3783448.0 7531.0 nc|ENSG00000197343|Q8N720-2|ZNF655;;ENST00000467680.5_1_7:99159903-99161679:+|nuORF 4.894848187764485 2.0 True 9.0 False non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_2 7533 39.878 800.0 207980.0 25 0 17001.0 + + -1 VIFPEGTRY 9 133 540.2894649598835 1078.564376986567 2 541.2885009646416 MULTI CID FTMS 0 0 0 7531 139536.375 0.3275477492427616 -12 0.3297920227050781 2 Oxidation (M) _PFKWM(Oxidation (M))NKL_ ENSG00000155189|ENST00000285518|AGPAT5 9.347437153973935 0.7675937258251505 6 P{I|L}{M(Oxidation (M))|F}PY{M(Oxidation (M))|F}QT 8 -1 52.617 0.0 0.0 4.8785 0.0 0.0 0.0 82.06683527164296 82.06683527164296 21.146840095548427 0.0 0.0 0.0 0 0.0 0.0 0.6307196863200843 0.6747425010840047 P{I|L}{M(Oxidation (M))|F}PY{M(Oxidation (M))|F}QT 4.8785 - 1157 + 1 1.538 130528.3 0.5600000023841858 2184 5347 7531 SUDHL4_400M_050219_2,7533 SUDHL4_400M_050219_2,7533,PFKWMNKL False False VIFPEGTRY 39.878221 541.288500964642 2692024.25 7531.0 ENSG00000155189|ENST00000285518|AGPAT5 4.883455753326416 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7534 39.886 407.0 239840.0 25 0 26784.0 + -1 IMGEFRTEV 9 108 549.2682298505399 1096.5219067678795 2 549.2686645388603 MULTI CID FTMS 0 0 0 7531 163187.671875 0.2364221524516525 -5 0.1679573059082031 3 Oxidation (M) _IM(Oxidation (M))GEFRTEV_ ENST00000534336.1_1_11:65268195-65268336:+|nuORF 26.268140514670165 0.1969607489560049 6 {I|L}{M(Oxidation (M))|F}GET 5 -1 43.175 0.0 0.0 3.9375 0.0 0.0 0.0 546.2732637994749 546.2732637994749 26.12850055101375 0.0 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 {I|L}{M(Oxidation (M))|F}GET 3.9375 - 825 + 1 1.538 79230.3 1.0 2185 5347 7531 SUDHL4_400M_050219_2,7534 SUDHL4_400M_050219_2,7534,IMGEFRTEV False False IMGEFRTEV 39.8855 549.26866453886 7140204.5 7531.0 ENST00000534336.1_1_11:65268195-65268336:+|nuORF 6.005764166514079 2.0 True 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7535 39.896 608.0 212950.0 25 0 11961.0 -1 0 128 954.4296371683724 1906.8447214035448 2 954.4303466677666 MULTI CID FTMS 0 0 0 7531 147853.53125 0.3870691778003391 -4 0.0783195495605468 4 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQHH[NS]{I|L}{[QS]|[NT]} 16 -1 + 79.871 0.0 0.0 4.1886 4.1886 73.278 0.0 0.0 0.0 44.00946145243424 10.334778045573074 10.334778045573074 1.1413033536000938 0 2.3723637474483468 0.0 1.4604093769761874 1.5044321917401078 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQHH[NS]{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEE[Y{M(Oxidation (M))|F}][RH]{I|L}{[QS]|[NT]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEQHH[WK]{[QS]|[NT]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[WM][{I|L}P]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SVAT{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[PA]AQ[{I|L}P]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}T{[ES]|[DT]|[{I|L}C]}[{I|L}P]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SV[YV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}[HV]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.1886;4.1288;3.8204;3.5311;3.3696;3.3586;3.2885;3.2783;3.212;3.1317 -;-;-;-;-;-;-;-;-;- 2976 + 1 1.538 88237.9 1.0 2186 5347 7531 SUDHL4_400M_050219_2,7535 SUDHL4_400M_050219_2,7535, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7537 39.901 98.0 476210.0 25 0 60444.0 + 12980 HAIPPTLAM 9 81 483.7571500620577 965.4997471909154 2 483.7571288943291 MULTI CID FTMS 0 0 0 7536 456781.71875 0.5156267880417321 29 -0.7385063171386719 1 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 49.66892048692302 0.0410958345688192 6 [{I|L}T][HK]H{I|L}A{M(Oxidation (M))|F} 8 5 [{I|L}T][HK]H + + 30.467 8.9693 1.4553 3.1556 3.1556 51.849 0.0 0.0 0.0 0.0 14.092072152004494 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 [{I|L}T][HK]H{I|L}A{M(Oxidation (M))|F} 3.1556 - 114 + 1 1.538 44396.2 1.0 2187 5348 7536 SUDHL4_400M_050219_2,7537 SUDHL4_400M_050219_2,7537,HAIPPTLAM True False HAIPPTLAM 39.900942 483.757128894329 115108720.0 7536.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 7.414758364359538 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7538 39.906 277.0 209400.0 25 0 16474.0 + 44195 YLFLGYLV 8 95 494.2790694088917 986.5435858845832 2 494.2789184451103 MULTI CID FTMS 0 0 0 7536 156583.328125 0.32653453096263 12 -0.2504692077636719 2 Unmodified _YLFLGYLV_ REV__ENSG00000088836|ENST00000642402|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-1|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-2|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-4|SLC4A11;REV__nc|ENSG00000088836|Q8NBS3-5|SLC4A11 17.086550045450526 0.6584923310065985 6 {[HG]|PP}ATQ[Y{I|L}]VV 9 -1 + 17.073 0.0 0.0 1.7305 1.7305 78.397 0.0 0.0 0.0 0.0659801494829608 2.7533120765689034 0.0659801494829608 9.208187539523752 0 0.3252574989159953 0.0 0.5 0.0 {[HG]|PP}ATQ[Y{I|L}]VV;{[HG]|PP}AT[AG][Y{I|L}]VV 1.7305;0.79717 -;- 122 1 1.538 52641.9 1.0 2188 5348 7536 SUDHL4_400M_050219_2,7538 SUDHL4_400M_050219_2,7538,YLFLGYLV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7539 39.92 800.0 97492.0 25 0 12301.0 19189 LEFEERAVAA 10 100 567.7943865276627 1133.574220122125 2 567.7948486208916 MULTI CID FTMS 0 0 0 7536 108486.90625 0.1962535359013765 6 -0.1073455810546875 3 Unmodified _LEFEERAVAA_ ENST00000427858.4_1_2:38893256-38893316:+|nuORF 8.745405648335112 0.6861838735306406 6 {[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}PM{I|L}YAA 10 6 + 43.447 0.0 0.0 3.8327 3.8327 75.0 0.0 0.0 0.0 8.02378753635658 7.269987279362624 7.269987279362624 3.0102999566398125 0 0.5 1.154901959985743 0.0 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}{[QV]|[N{I|L}]|[RA]|[KV]}PM{I|L}YAA;{[QN]|[E{I|L}]|[KN]}[NP]{I|L}M{I|L}YAA;[{I|L}T][WM]TE{I|L}VAA;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}EWW{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}D]|MM}{[VA]|[{I|L}G]}E{I|L}VAA;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}[WP][NG]{M(Oxidation (M))|F}AA;{[TV]|[{I|L}S]}{[{M(Oxidation (M))|F}D]|MM}[W{I|L}]{I|L}VAA;{[TV]|[{I|L}S]}{[WT]|[RM]}[C(Carbamidomethyl (C))N]{I|L}VAA 3.8327;3.5672;3.1249;1.2037;0.9799;0.87286;0.39981;0.32996 -;-;-;-;-;-;-;- 187 1 1.538 65578.6 0.5299999713897705 2189 5348 7536 SUDHL4_400M_050219_2,7539 SUDHL4_400M_050219_2,7539,LEFEERAVAA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7541 39.927 139.0 409360.0 25 0 77778.0 + 44157 YLDPRITVA 9 55 524.2953750810059 1046.5761972288117 2 524.2953979372978 MULTI CID FTMS 0 0 0 7540 337353.28125 0.3887646901724791 4 -0.0795173645019531 1 Unmodified _YLDPRITVA_ ENSG00000198900|ENST00000361337|TOP1 24.020572477871973 0.2255576514309169 6 [Y{I|L}]D 3 6 39.705 0.0 0.0 3.7938 0.0 0.0 0.0 652.3789037201284 652.3789037201284 22.1868801865088 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + [Y{I|L}]D 3.7938 + + 36 + 1 1.538 48470.2 1.0 2190 5349 7540 SUDHL4_400M_050219_2,7541 SUDHL4_400M_050219_2,7541,YLDPRITVA False True YLDPRITVA 39.92661 524.295397937298 8549657.0 7540.0 ENSG00000198900|ENST00000361337|TOP1 2.9127466678619385 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7542 39.931 205.0 196330.0 25 0 11217.0 + 7547 EIGWDKEI 8 72 495.25228384542686 988.4900147576536 2 495.2516662478447 MULTI CID FTMS 0 0 0 7540 118994.140625 0.6306025556725021 -2 0.0624542236328125 2 Unmodified _EIGWDKEI_ REV__ENSG00000070601|ENST00000377765|FRMPD1;REV__nc|ENSG00000070601|Q5SYB0-2|FRMPD1;REV__nc|ENSG00000070601|Q5SYB0-3|FRMPD1 20.453626601364224 0.6087503291685402 6 SKE{I|L} 4 -1 39.557 0.0 0.0 4.0018 0.0 0.0 513.2262440412125 0.0 513.2262440412125 0.0 27.338942739842253 0.0 0.0 0 0.2134679910804404 0.0 0.8494850021680094 0.0 SKE{I|L} 4.0018 - 88 1 1.538 35763.5 1.0 2191 5349 7540 SUDHL4_400M_050219_2,7542 SUDHL4_400M_050219_2,7542,EIGWDKEI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7543 39.944 800.0 102250.0 25 0 27709.0 -1 0 83 958.4407594760808 2872.3004490284425 3 958.4413940310478 MULTI CID FTMS 0 0 0 7540 103512.421875 0.7216124665379307 -8 0.28106689453125 3 6 VGKT{I|L}{I|L} 6 -1 27.428 0.0 0.0 0.95491 0.0 0.0 1931.740464752855 326.1370028131469 2257.877467566002 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 VGKT{I|L}{I|L} 0.95491 - 184 + 1 1.538 65758.2 0.449999988079071 2192 5349 7540 SUDHL4_400M_050219_2,7543 SUDHL4_400M_050219_2,7543, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7545 39.95 139.0 351570.0 25 0 38794.0 + 37792 TLSEVTNQL 9 96 502.7662995781122 1003.5180462230244 2 502.7660705447197 MULTI CID FTMS 0 0 0 7544 268810.0625 0.3245428778529056 5 -0.0722427368164062 1 Unmodified _TLSEVTNQL_ ENSG00000170145|ENST00000304987|SIK2 44.40701690623563 0.0526327925666318 6 [{I|L}T]{[ES]|[DT]|[{I|L}C]}V[KC][QP] 9 3 + 31.359 0.0 0.0 3.1249 3.1249 73.633 0.0 0.0 0.0 6.169687155616405 2.178024757013265 2.178024757013265 3.3843154735291883 0 0.0 2.0 1.174742501084005 0.0 [{I|L}T]{[ES]|[DT]|[{I|L}C]}V[KC][QP];[{I|L}T]{[WT]|[RM]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP];{[QN]|[E{I|L}]|[KN]}{[CA]|SS}{I|L}[KC][QP];{[QN]|[E{I|L}]|[KN]}{[MG]|[TS]}V[KC][QP];[{I|L}T][VS]T{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[QP];{[ES]|[DT]|[{I|L}C]}VT{I|L}[KC][QP];{[QD]|[EN]|[WG]|[KD]|[RS]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[QN]|[E{I|L}]|[KN]}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KC]V[NG]Q{I|L};[VP]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[KC][QP];{[ES]|[DT]|[{I|L}C]}[{I|L}T]V[KC][QP] 3.1249;2.7877;2.5022;2.5008;2.4367;1.5597;1.1149;0.60564;0.41128;0.26566 -;-;-;-;-;-;-;-;-;- 217 1 1.538 42561.1 1.0 2193 5350 7544 SUDHL4_400M_050219_2,7545 SUDHL4_400M_050219_2,7545,TLSEVTNQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7546 39.953 192.0 303880.0 25 0 23442.0 + 44370 YLSPDLSKV 9 87 511.2826916856413 1020.5508304380826 2 511.2824279665947 MULTI CID FTMS 0 0 0 7544 219743.234375 0.7127956021022441 -7 0.1652107238769531 2 Unmodified _YLSPDLSKV_ ENSG00000157764|ENST00000646891|BRAF;ENST00000445336.2_1_X:74804463-74804925:+|nuORF;ENST00000479537.5_1_7:140434399-140447180:-|nuORF;ENST00000497784.1_2_7:140434399-140508041:-|nuORF 29.84058131909904 0.1515068451768857 6 [Y{I|L}]SPD{I|L}SKV 9 0 + 48.412 0.0 0.0 4.7437 4.7437 87.364 0.0 0.0 0.0 20.44994474394521 5.801076760918704 5.801076760918704 20.48995518723196 0 0.6989700043360187 2.0 0.3252574989159953 0.0 + + [Y{I|L}]SPD{I|L}SKV;{[TV]|[{I|L}S]}[DP]KSV[Y{I|L}];{[TV]|[{I|L}S]}[DP]SKV[Y{I|L}];{[TV]|[{I|L}S]}[DP]V[KS][Y{I|L}];[DP]S{I|L}KSV[Y{I|L}];[DP]{I|L}SKSV[Y{I|L}];[DP]S{I|L}SKV[Y{I|L}];[DP]{I|L}SSKV[Y{I|L}];[DP]S{I|L}V[KS][Y{I|L}];[DP]{I|L}SV[KS][Y{I|L}] 4.7437;2.736;2.536;2.1473;1.3996;1.2271;1.1996;1.0271;0.8109;0.63836 +;-;-;-;-;-;-;-;-;- + 460 + 1 1.538 48598.4 1.0 2194 5350 7544 SUDHL4_400M_050219_2,7546 SUDHL4_400M_050219_2,7546,YLSPDLSKV False True YLSPDLSKV 39.953381 511.282427966595 2400497.75 7544.0 ENST00000479537.5_1_7:140434399-140447180:-|nuORF;;ENSG00000157764|ENST00000646891|BRAF;;ENST00000497784.1_2_7:140434399-140508041:-|nuORF;;ENST00000445336.2_1_X:74804463-74804925:+|nuORF 5.507502873738607 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7547 39.957 210.0 242080.0 25 0 15320.0 -1 VLMEQITLK 9 92 545.8111185394025 1089.607684145605 2 546.3154174685478 MULTI CID FTMS 0 0 0 7544 81503.9453125 0.530835025355915 -4 0.1104011535644531 3 Oxidation (M) _VLM(Oxidation (M))EQITLK_ ENSG00000128683|ENST00000358196|GAD1;ENST00000462739.1_1_2:171700576-171701844:+|nuORF;nc|ENSG00000128683|Q99259-4|GAD1 10.073929032068715 0.563993802247229 6 [VP][WY]A{I|L}E 7 -1 12.641 0.0 0.0 1.1602 0.0 0.0 0.0 228.1575943463576 228.1575943463576 1.0476632675531796 0.0 0.0 0.0 0 0.0 0.5686362358410126 0.0 0.0 [VP][WY]A{I|L}E 1.1602 - 66 1 1.538 45015.3 1.0 2195 5350 7544 SUDHL4_400M_050219_2,7547 SUDHL4_400M_050219_2,7547,VLMEQITLK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7549 39.962 48.0 1142700.0 25 0 240670.0 + 15030 ILTDITKGV 9 76 480.29233179726464 958.5701106613292 2 480.2923156619072 MULTI CID FTMS 0 0 0 7548 1239818.125 0.3900070644100714 6 -0.1063003540039062 1 Unmodified _ILTDITKGV_ ENSG00000167658|ENST00000309311|EEF2 36.506200033944 0.094635877243972 6 {I|L}{I|L}TD{I|L}TKGV 9 0 + 74.892 0.0 0.0 7.8129 7.8129 94.074 0.0 0.0 0.0 42.642583239915375 4.454774046158221 4.454774046158221 10.209339068356428 0 0.6861818737241735 2.0 0.5 0.0 + + {I|L}{I|L}TD{I|L}TKGV;{I|L}{I|L}TD{I|L}KKE;[{I|L}T]DTKG[{I|L}V]{I|L};{I|L}{I|L}[RP][HQ]PV;{[ES]|[DT]|[{I|L}C]}{I|L}TKG[{I|L}V]{I|L} 7.8129;6.7479;3.7534;3.1138;2.6453 +;-;-;-;- + 164 + 1 1.538 47990.5 1.0 2196 5351 7548 SUDHL4_400M_050219_2,7549 SUDHL4_400M_050219_2,7549,ILTDITKGV True True ILTDITKGV 39.962177 480.292315661907 30488076.0 7548.0 ENSG00000167658|ENST00000309311|EEF2 3.8775224685668954 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7550 39.965 119.0 396880.0 25 0 83455.0 41092 VNKDKGRP 8 75 457.2642794489496 912.5140059646992 2 457.2643005251884 MULTI CID FTMS 0 0 0 7548 503328.15625 0.8776575478707903 6 -0.1063003540039062 2 Unmodified _VNKDKGRP_ ENSG00000165138|ENST00000353234|ANKS6;nc|ENSG00000165138|Q68DC2-4|ANKS6 4.75600775471527 0.7954636275367004 6 A 1 8 10.278 0.0 0.0 1.1263 0.0 0.0 823.465702292139 0.0 823.465702292139 0.0 10.277586639249154 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.1263 - 6 + 1 1.538 42707.9 1.0 2197 5351 7548 SUDHL4_400M_050219_2,7550 SUDHL4_400M_050219_2,7550,VNKDKGRP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7551 39.969 227.0 155700.0 25 0 7850.2 + 1355 ALAAALAEVA 10 86 450.26317690877954 898.5118008843591 2 450.2580749392509 MULTI CID FTMS 0 0 0 7548 182527.546875 0.0753332179258158 16 -0.363311767578125 3 Unmodified _ALAAALAEVA_ REV__ENSG00000165732|ENST00000354185|DDX21;REV__nc|ENSG00000165732|Q9NR30-2|DDX21 18.13498045792455 0.5432546531930572 6 [{I|L}A]VN{I|L} 5 -1 23.645 0.0 0.0 2.6316 0.0 0.0 0.0 385.1720541404716 385.1720541404716 11.170912423450403 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}A]VN{I|L} 2.6316 - 56 1 1.538 34116.4 1.0 2198 5351 7548 SUDHL4_400M_050219_2,7551 SUDHL4_400M_050219_2,7551,ALAAALAEVA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7553 39.985 800.0 129360.0 25 0 7444.0 23340 LTCSVSSN 8 164 405.6881625710898 809.3617722089796 2 405.6882812380791 MULTI CID FTMS 0 0 0 7552 72481.75 0.6027786124739669 -7 0.1504936218261718 1 Unmodified _LTCSVSSN_ ENST00000368704.5_1_1:153579638-153580001:-|nuORF 12.531546534597751 0.7257836412119636 6 {[QN]|[E{I|L}]|[KN]}YP{M(Oxidation (M))|F}AA 7 7 + 40.907 0.0 0.0 5.0543 5.0543 88.822 0.0 0.0 0.0 13.74028373994568 12.518119729937997 12.518119729937997 24.15711342305949 0 0.7931576817365437 2.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}YP{M(Oxidation (M))|F}AA;{[QN]|[E{I|L}]|[KN]}[HS]H{[MG]|[TS]} 5.0543;2.0696 -;- 197 + 1 1.538 83308.1 0.3700000047683716 2199 5352 7552 SUDHL4_400M_050219_2,7553 SUDHL4_400M_050219_2,7553,LTCSVSSN False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7554 39.997 664.0 151140.0 25 0 20702.0 + 11167 GELGNGNIKL 10 125 507.78253309734447 1013.550513261489 2 507.7827331423759 MULTI CID FTMS 0 0 0 7552 128763.3359375 0.6007205202517342 -1 0.0115242004394531 2 Unmodified _GELGNGNIKL_ ENSG00000132646|ENST00000379143|PCNA 47.74868867922204 0.0933642699623533 6 {[DA]|[EG]}{I|L}GN[NG]{I|L}K{I|L} 10 0 + 62.413 0.0 0.0 6.1579 6.1579 87.864 0.0 0.0 0.0 27.59459643276614 12.64136888583522 12.64136888583522 9.164539485499256 0 0.9247425010840048 1.5228787452803376 0.0 0.7302046884880937 + + {[DA]|[EG]}{I|L}GN[NG]{I|L}K{I|L};{[DA]|[EG]}{I|L}GGG[NG]{I|L}K{I|L};W{I|L}[KP]DDK{I|L};{[DA]|[EG]}{I|L}[KP][RD]S{I|L};{[DA]|[EG]}{I|L}[KP][RD]TV;{[DA]|[EG]}{I|L}[KP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}PV 6.1579;5.2537;3.6757;2.6811;2.021;1.6311 +;-;-;-;-;- + 660 + 1 1.538 81089.8 1.0 2200 5352 7552 SUDHL4_400M_050219_2,7554 SUDHL4_400M_050219_2,7554,GELGNGNIKL True True GELGNGNIKL 39.996818 507.782733142376 2027539.625 7552.0 ENSG00000132646|ENST00000379143|PCNA 4.667469501495361 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7555 39.999 127.0 666950.0 25 0 102730.0 + 37917 TLYEAVREV 9 85 540.2894649598835 1078.564376986567 2 540.2904540896416 MULTI CID FTMS 0 0 0 7552 286254.0625 0.1930064962199076 -7 0.1504936218261718 3 Unmodified _TLYEAVREV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF 23.78978130925829 0.2284941198415988 6 [{I|L}T]YEAV 6 3 57.268 0.0 0.0 5.3096 0.0 0.0 0.0 399.19968591861567 399.19968591861567 31.32576888900239 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.3494850021680094 0.0 + [{I|L}T]YEAV 5.3096 + + 624 + 1 1.538 69514.0 1.0 2201 5352 7552 SUDHL4_400M_050219_2,7555 SUDHL4_400M_050219_2,7555,TLYEAVREV False True TLYEAVREV 39.99943 540.290454089642 14687883.0 7552.0 ENST00000490335.4_1_6:35436211-35436651:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENSG00000198755|ENST00000322203|RPL10A;;ENST00000467020.5_1_6:35436211-35436817:+|nuORF 6.316837151845296 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7558 40.008 58.0 863980.0 25 0 85041.0 + 20595 LLPDNVHYV 9 74 535.2874673824573 1068.5603818317145 2 535.2877685427666 MULTI CID FTMS 0 0 0 7557 627511.375 0.9484606026621032 4 -0.0765571594238281 1 Unmodified _LLPDNVHYV_ ENSG00000039123|ENST00000230640|MTREX 26.88365393820708 0.1891292719743517 6 {I|L}{I|L}PD{[NV]|[RG]}HVY 9 2 + 59.939 0.0 0.0 5.6093 5.6093 89.689 0.0 0.0 0.0 40.8091592184438 11.478174818886371 11.478174818886371 15.056584229283844 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {I|L}{I|L}PD{[NV]|[RG]}HVY;{I|L}{I|L}VYYHVY;{I|L}{I|L}PD{[NV]|[RG]}[KA]{[CP]|[EA]};{I|L}{I|L}VYY[KA]{[CP]|[EA]};{I|L}{I|L}P[RH]{[{M(Oxidation (M))|F}D]|MM}[TA];{I|L}{I|L}V[YK]{[{M(Oxidation (M))|F}D]|MM}[TA];YYVHYV{I|L}{I|L};{[WN]|[YH]}[YV]YV{I|L}{I|L} 5.6093;4.2003;3.4821;2.8218;2.5891;2.5401;1.5753;0.54874 -;-;-;-;-;-;-;- 97 + 1 1.538 45481.1 1.0 2202 5354 7557 SUDHL4_400M_050219_2,7558 SUDHL4_400M_050219_2,7558,LLPDNVHYV False True LLPDNVHYV 40.008287 535.287768542767 3741466.5 7557.0 ENSG00000039123|ENST00000230640|MTREX 6.447092533111572 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7559 40.017 468.0 151990.0 25 0 17458.0 + 14802 ILDQLGEQL 9 123 514.7852083685204 1027.5558638038408 2 514.7853271365166 MULTI CID FTMS 0 0 0 7557 124959.2890625 0.6372476673120901 -5 0.083587646484375 2 Unmodified _ILDQLGEQL_ REV__ENSG00000119737|ENST00000394705|GPR75 32.30548876998284 0.1201446275138228 6 {I|L}{I|L}QDAVG 7 -1 23.165 0.0 0.0 2.2544 0.0 0.0 0.0 328.1411658880783 328.1411658880783 5.184509632822309 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.2742275032520141 {I|L}{I|L}QDAVG 2.2544 - 1558 1 1.538 60146.8 1.0 2203 5354 7557 SUDHL4_400M_050219_2,7559 SUDHL4_400M_050219_2,7559,ILDQLGEQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7561 40.03 648.0 66937.0 25 0 3553.3 -1 0 78 946.4325390312224 1890.8505251292447 2 946.9348022341728 MULTI CID FTMS 0 0 0 7560 77678.53125 0.6760301947877112 1 -0.0176849365234375 1 6 [NP]{I|L}NM 5 -1 20.062 0.0 0.0 1.061 0.0 0.0 0.0 1318.5685176431698 1318.5685176431698 0.2684772199832217 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 [NP]{I|L}NM 1.061 - 101 1 1.538 34254.3 1.0 2204 5355 7560 SUDHL4_400M_050219_2,7561 SUDHL4_400M_050219_2,7561, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7562 40.034 199.0 215420.0 25 0 17255.0 + 10590 FVKGWGAEY 9 86 528.7613053796025 1055.508057826005 2 528.7610351443291 MULTI CID FTMS 0 0 0 7560 168068.734375 0.5908752924740683 -3 0.0476799011230468 2 Unmodified _FVKGWGAEY_ ENSG00000113658|ENST00000545279|SMAD5;ENSG00000120693|ENST00000379826|SMAD9;ENSG00000166949|ENST00000327367|SMAD3;ENSG00000170365|ENST00000302085|SMAD1;ENSG00000175387|ENST00000262160|SMAD2;nc|ENSG00000120693|O15198-2|SMAD9;nc|ENSG00000166949|P84022-2|SMAD3;nc|ENSG00000166949|P84022-3|SMAD3;nc|ENSG00000166949|P84022-4|SMAD3;nc|ENSG00000175387|Q15796-2|SMAD2 16.942295170755138 0.3780752226737986 6 {[WN]|[YH]}AKEY[{M(Oxidation (M))|F}V] 8 8 + 24.614 0.0 0.0 2.332 2.332 70.357 0.0 0.0 0.0 3.979400086720375 6.030768805449185 3.979400086720375 1.7731749024395782 0 0.0 0.0 0.0 0.0 {[WN]|[YH]}AKEY[{M(Oxidation (M))|F}V];{[WN]|[YH]}ARTY[{M(Oxidation (M))|F}V];{[WN]|[YH]}AK[{M(Oxidation (M))|F}V]EY;{[WN]|[YH]}AK[Y{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]};[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}KEY[{M(Oxidation (M))|F}V];{[WN]|[YH]}A[VG]TY[{M(Oxidation (M))|F}V];[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}RTY[{M(Oxidation (M))|F}V];[{M(Oxidation (M))|F}V][RP]EY[{M(Oxidation (M))|F}V];[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}K[Y{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]};[AG]{[QD]|[EN]|[WG]|[KD]|[RS]}K[{M(Oxidation (M))|F}V]EY 2.332;2.164;1.6656;1.6009;1.328;1.2865;1.16;0.9591;0.95759;0.66155 -;-;-;-;-;-;-;-;-;- 102 1 1.538 36670.8 1.0 2205 5355 7560 SUDHL4_400M_050219_2,7562 SUDHL4_400M_050219_2,7562,FVKGWGAEY False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7564 40.051 800.0 97298.0 25 0 6746.9 + 32091 RVLPPSALQSV 11 102 583.8477666555467 1165.680980377893 2 583.8481933474541 MULTI CID FTMS 0 0 0 7563 97500.234375 0.4675774063543617 19 -0.5401954650878906 1 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 59.05245873256422 0.0729907235015292 6 {I|L}P[PS]A{I|L}QW 8 4 57.401 0.0 0.0 4.9242 0.0 0.0 255.169725486525 0.0 255.169725486525 0.0 39.83410649039925 0.0 0.0 0 1.16944517631652 0.0 0.805462187404089 0.0 {I|L}P[PS]A{I|L}QW 4.9242 - 193 1 1.538 67691.3 0.4799999892711639 2206 5356 7563 SUDHL4_400M_050219_2,7564 SUDHL4_400M_050219_2,7564,RVLPPSALQSV True True RVLPPSALQSV 40.050655 583.848193347454 12012103.0 7563.0 nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;nc|ENSG00000178999|Q96GD4-2|AURKB 9.092315991719564 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7565 40.053 97.0 608010.0 25 0 52497.0 + 32157 RVQGFQVEY 9 79 563.2882508190417 1124.5619487048832 2 563.2882568240166 MULTI CID FTMS 0 0 0 7563 323302.375 1.0 0 0.0 2 Unmodified _RVQGFQVEY_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 18.1463463914782 0.3454829746528889 6 [VG]ARG{M(Oxidation (M))|F}QVEY 10 3 + 62.049 0.0 0.0 5.5176 5.5176 77.927 0.0 0.0 0.0 1.249387366082999 16.53212513775344 1.249387366082999 1.249387366082999 0 0.4247425010840047 1.6989700043360187 0.0 0.0 [VG]ARG{M(Oxidation (M))|F}QVEY;{[VA]|[{I|L}G]}GRG{M(Oxidation (M))|F}QVEY;[VG]ARG{M(Oxidation (M))|F}[AG]VEY;{[VA]|[{I|L}G]}GRG{M(Oxidation (M))|F}[AG]VEY;{[QV]|[N{I|L}]|[RA]|[KV]}RG{M(Oxidation (M))|F}QVEY;{[VA]|[{I|L}G]}[RN]{M(Oxidation (M))|F}QVEY;[VG]AAV{M(Oxidation (M))|F}[RN]EY;{[QV]|[N{I|L}]|[RA]|[KV]}RG{M(Oxidation (M))|F}[AG]VEY;{[VA]|[{I|L}G]}GAV{M(Oxidation (M))|F}[RN]EY;[VG]AVA{M(Oxidation (M))|F}[RN]EY 5.5176;5.4065;4.7027;4.5916;4.5422;3.8503;3.7392;3.7234;3.6281;3.5826 -;-;-;-;-;-;-;-;-;- 378 1 1.538 51404.3 1.0 2207 5356 7563 SUDHL4_400M_050219_2,7565 SUDHL4_400M_050219_2,7565,RVQGFQVEY False True RVQGFQVEY 40.052778 563.288256824017 1757265.875 7563.0 nc|ENSG00000124214|O95793-2|STAU1;;nc|ENSG00000124214|O95793-3|STAU1;;ENSG00000124214|ENST00000371856|STAU1 5.575062433878581 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7566 40.055 104.0 488590.0 25 0 35561.0 + 42658 VTVPPGPSL 9 82 433.75272576377824 0 433.7528259158134 PEAK CID FTMS 0 0 0 7563 445323.4375 0.1007891575993073 27 -0.7268257141113281 3 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 81.61307344734483 0.0128847307415601 6 PP[TA]E 5 7 19.679 0.0 0.0 2.2738 0.0 0.0 299.1842747050326 68.05127130679921 367.2355460118318 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 1.25 0.0 PP[TA]E 2.2738 - 103 + 1 1.538 46454.1 1.0 2208 5356 7563 SUDHL4_400M_050219_2,7566 SUDHL4_400M_050219_2,7566,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7567 40.064 491.0 202290.0 25 0 14670.0 -1 0 113 917.9253426255488 1833.8361323178967 2 917.9295532107352 MULTI CID FTMS 0 0 0 7563 125104.3671875 0.8689919181710477 -3 0.0348472595214843 4 6 [NP]{I|L}{M(Oxidation (M))|F}EAD{I|L}[WY]{I|L}DP{[QN]|[E{I|L}]|[KN]} 15 -1 + 65.072 0.0 0.0 3.5484 3.5484 76.608 0.0 0.0 0.0 4.541095754565106 28.784284981239864 4.541095754565106 5.425719399310211 0 0.2887254899964357 0.8239087409443188 1.0189301784845295 0.4247425010840047 [NP]{I|L}{M(Oxidation (M))|F}EAD{I|L}[WY]{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}{M(Oxidation (M))|F}EG[YK]DAN{I|L}DP{[QN]|[E{I|L}]|[KN]};{[ES]|[DT]|[{I|L}C]}VVGEAD{I|L}[WY]{I|L}DP{[QN]|[E{I|L}]|[KN]};{[ES]|[DT]|[{I|L}C]}VVGEG[YK]DAN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}{M(Oxidation (M))|F}EAD{I|L}[WY]{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QS]|[NT]}[KQ]EAD{I|L}[WY]{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}{M(Oxidation (M))|F}EW{I|L}[WY]{I|L}DP{[QN]|[E{I|L}]|[KN]};{[CP]|[EA]}[{I|L}T]GEAD{I|L}[WY]{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}{M(Oxidation (M))|F}EGE{I|L}[WY]{I|L}DP{[QN]|[E{I|L}]|[KN]};{[ES]|[DT]|[{I|L}C]}[RV]EAD{I|L}[WY]{I|L}DP{[QN]|[E{I|L}]|[KN]} 3.5484;3.2525;3.2158;3.1525;3.1269;3.1202;3.0261;2.9832;2.9301;2.9241 -;-;-;-;-;-;-;-;-;- 4589 1 1.538 68036.1 1.0 2209 5356 7563 SUDHL4_400M_050219_2,7567 SUDHL4_400M_050219_2,7567, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7569 40.08 800.0 131140.0 25 0 16901.0 -1 0 89 603.9672444161467 1808.87990384864 3 604.2985107302666 MULTI CID FTMS 0 0 0 7568 88999.859375 0.0604162819931023 29 -0.8255424499511719 1 6 NH{I|L}{M(Oxidation (M))|F}GNY[MD][KG]Q{I|L}Q 14 -1 58.101 0.0 0.0 3.212 0.0 0.0 145.0816352937805 0.0 145.0816352937805 0.0 27.66843224010877 0.0 0.0 0 0.0 0.0 0.0 0.6989700043360187 NH{I|L}{M(Oxidation (M))|F}GNY[MD][KG]Q{I|L}Q 3.212 - 758 + 1 1.538 83006.0 0.5099999904632568 2210 5357 7568 SUDHL4_400M_050219_2,7569 SUDHL4_400M_050219_2,7569, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7571 40.085 58.0 964240.0 25 0 130840.0 + 34818 SQFGTVTRF 9 69 521.7695794095097 1041.5246058858193 2 521.7696411013603 MULTI CID FTMS 0 0 0 7570 734577.9375 0.359800772583445 6 -0.1728591918945312 1 Unmodified _SQFGTVTRF_ ENSG00000155438|ENST00000285814|NIFK;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 57.72198328787511 0.0273433238377839 6 {[QS]|[NT]}{M(Oxidation (M))|F}G{[TV]|[{I|L}S]}T[R{M(Oxidation (M))|F}] 9 0 + 59.019 0.0 0.0 5.6666 5.6666 91.689 0.0 0.0 0.0 52.02947800538006 8.697114610913488 8.697114610913488 36.378493940035455 0 1.0 1.0969100130080565 1.1861818737241734 0.3054621874040891 + + {[QS]|[NT]}{M(Oxidation (M))|F}G{[TV]|[{I|L}S]}T[R{M(Oxidation (M))|F}];{[QS]|[NT]}[RP][DP]K{[QS]|[NT]} 5.6666;2.1738 +;- + 59 + 1 1.538 47137.5 1.0 2211 5358 7570 SUDHL4_400M_050219_2,7571 SUDHL4_400M_050219_2,7571,SQFGTVTRF True True SQFGTVTRF 40.084847 521.76964110136 20066790.0 7570.0 ENSG00000155438|ENST00000285814|NIFK;;ENST00000477693.1_1_2:122488402-122494426:-|nuORF 4.723905245463054 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7572 40.09 293.0 162050.0 25 0 18987.0 + 8345 ERRPAAKG 8 75 442.7568876550958 883.4992223769916 2 442.7565795779228 MULTI CID FTMS 0 0 0 7570 109589.8828125 0.4273649795248757 17 -0.494415283203125 2 Unmodified _ERRPAAKG_ REV__ENSG00000182103|ENST00000329203|FAM181B 2.302733041254933 0.8103549651115762 6 {I|L} 1 -1 9.3323 0.0 0.0 1.0563 0.0 0.0 752.4044175447635 0.0 752.4044175447635 0.0 6.233361666706943 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0563 - 6 + 1 1.538 42330.8 1.0 2212 5358 7570 SUDHL4_400M_050219_2,7572 SUDHL4_400M_050219_2,7572,ERRPAAKG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7573 40.097 374.0 129030.0 25 0 14049.0 23216 LSSRGQLQL 9 77 501.2909857587062 1000.5674185842124 2 501.2905151247978 MULTI CID FTMS 0 0 0 7570 96198.1328125 0.2763024948129446 -22 0.5485343933105469 3 Unmodified _LSSRGQLQL_ ENST00000531038.5_1_4:8472779-8495174:+|nuORF 15.847184025352805 0.4077185912009129 6 {NN|[MP]|[D{I|L}]|[EV]}G 3 7 18.416 0.0 0.0 1.8406 0.0 0.0 0.0 712.4045455031379 712.4045455031379 6.82258126592544 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}G 1.8406 - 36 1 1.538 41992.7 1.0 2213 5358 7570 SUDHL4_400M_050219_2,7573 SUDHL4_400M_050219_2,7573,LSSRGQLQL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7574 40.111 800.0 166700.0 25 0 12077.0 -1 QAFPCCLS 8 136 491.70921788390353 981.4038828346072 2 491.7101623415947 MULTI CID FTMS 0 0 0 7570 96573.7734375 0.6012011238230527 -8 0.1357078552246093 4 2 Carbamidomethyl (C) _QAFPC(Carbamidomethyl (C))C(Carbamidomethyl (C))LS_ ENSG00000180113|ENST00000316081|TDRD6;nc|ENSG00000180113|O60522-2|TDRD6 23.1484247019978 0.5573009939494978 6 [QA]EV{I|L}V 6 -1 39.857 0.0 0.0 4.0612 0.0 0.0 0.0 339.0240518749512 339.0240518749512 23.743400000253043 0.0 0.0 0.0 0 0.5 0.8860566476931632 0.0 0.9876954943324544 [QA]EV{I|L}V 4.0612 - 438 1 1.538 104596.2 0.4799999892711639 2214 5358 7570 SUDHL4_400M_050219_2,7574 SUDHL4_400M_050219_2,7574,QAFPCCLS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7576 40.128 800.0 86752.0 25 0 6069.6 -1 0 85 964.4433002476126 2890.3080713430377 3 964.7799560427666 MULTI CID FTMS 0 0 0 7575 88590.9453125 0.1372459187774724 19 -0.540313720703125 1 6 [NP]VSE[VS][HD]M 10 -1 10.908 0.0 0.0 0.3774 0.0 0.0 0.0 1791.7810687397753 1791.7810687397753 3.728721920568246 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 [NP]VSE[VS][HD]M 0.3774 - 629 1 1.538 55085.6 0.5 2215 5359 7575 SUDHL4_400M_050219_2,7576 SUDHL4_400M_050219_2,7576, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7577 40.133 230.0 507520.0 25 0 65474.0 + 30823 RIIDVVYNA 9 96 531.8006311487749 1061.5867093643496 2 531.8008911013603 MULTI CID FTMS 0 0 0 7575 258504.140625 0.0263792682707181 -9 0.1663894653320312 2 Unmodified _RIIDVVYNA_ ENSG00000142937|ENST00000396651|RPS8 26.268140514670165 0.1969607489560049 6 DYVV 4 7 34.993 0.0 0.0 3.2963 0.0 0.0 88.0520546786059 494.2726857919228 582.3247404705287 0.0 0.0 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 DYVV 3.2963 - 75 + 1 1.538 92806.8 1.0 2216 5359 7575 SUDHL4_400M_050219_2,7577 SUDHL4_400M_050219_2,7577,RIIDVVYNA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7578 40.147 800.0 176610.0 25 0 18187.0 + 27010 PELLTAMSML 10 144 553.2829398808266 1104.551326828453 2 553.2828246951103 MULTI CID FTMS 0 0 0 7575 95726.7890625 0.1984016664858554 -6 0.1113090515136718 3 Unmodified _PELLTAMSML_ REV__ENST00000216181.9_1_22:36716845-36717844:-|nuORF 22.736283301280096 0.4578556481593033 6 VY{M(Oxidation (M))|F}ATT{I|L}KY 9 -1 + 94.791 0.0 0.0 8.5819 8.5819 87.371 0.0 0.0 0.0 3.0102999566398125 6.867355479190067 3.0102999566398125 3.0102999566398125 0 1.0941876774005248 2.0 0.6505149978319906 0.0 VY{M(Oxidation (M))|F}ATT{I|L}KY;YV{M(Oxidation (M))|F}ATT{I|L}KY;VY{M(Oxidation (M))|F}ATTPPP{I|L};VY{M(Oxidation (M))|F}ATT{I|L}YK;YV{M(Oxidation (M))|F}ATTPPP{I|L};YV{M(Oxidation (M))|F}ATT{I|L}YK;VY{M(Oxidation (M))|F}ATT[YK]{I|L};YV{M(Oxidation (M))|F}ATT[YK]{I|L};VYE[YQ]{I|L}KY;YVE[YQ]{I|L}KY 8.5819;8.3093;7.9602;7.8311;7.6876;7.5585;6.7088;6.4363;5.8308;5.5583 -;-;-;-;-;-;-;-;-;- 2537 + 1 1.538 110007.5 0.5099999904632568 2217 5359 7575 SUDHL4_400M_050219_2,7578 SUDHL4_400M_050219_2,7578,PELLTAMSML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7580 40.157 420.0 216380.0 25 0 23288.0 + 28785 PYISNYMLP 9 96 549.2682298505399 1096.5219067678795 2 549.2681152224541 MULTI CID FTMS 0 0 0 7579 213202.78125 0.3088827720418377 8 -0.1933326721191406 1 Unmodified _PYISNYMLP_ REV__ENSG00000075223|ENST00000265361|SEMA3C 15.847184025352805 0.4077185912009129 6 {I|L}{M(Oxidation (M))|F}GE{M(Oxidation (M))|F} 5 -1 39.993 0.0 0.0 3.6472 0.0 0.0 0.0 500.2461336725219 500.2461336725219 24.95567808259892 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {I|L}{M(Oxidation (M))|F}GE{M(Oxidation (M))|F} 3.6472 - 147 + 1 1.538 74003.2 1.0 2218 5360 7579 SUDHL4_400M_050219_2,7580 SUDHL4_400M_050219_2,7580,PYISNYMLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7581 40.16 169.0 360890.0 25 0 56087.0 + 39245 VAAFAALT 8 98 382.2201765751128 762.4258002170257 2 382.2199584841728 MULTI CID FTMS 0 0 0 7579 363028.5625 0.2167807251117949 -7 0.1471939086914062 2 Unmodified _VAAFAALT_ REV__ENSG00000117600|ENST00000370185|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-3|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5|PLPPR4 0.0 0.8243325171867699 6 E 1 -1 2.993 0.0 0.0 0.39256 0.0 0.0 381.2477739492506 249.112604009436 630.3603779586866 0.0 0.0 0.0 0.0 0 0.2614393726401688 0.0 0.0 0.0 E 0.39256 - 3 + 1 1.538 55107.1 1.0 2219 5360 7579 SUDHL4_400M_050219_2,7581 SUDHL4_400M_050219_2,7581,VAAFAALT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7582 40.173 759.0 289370.0 25 0 18246.0 + 16275 IVVDNVPQV 9 151 491.781720641966 981.548888350732 2 491.7823669314384 MULTI CID FTMS 0 0 0 7579 158375.796875 0.4138688400061182 -5 0.1300315856933593 3 Unmodified _IVVDNVPQV_ ENSG00000106263|ENST00000360876|EIF3B;nc|ENSG00000106263|P55884-2|EIF3B 54.773552608820026 0.0299037012502309 6 [QA]EV{I|L}V 6 7 44.874 0.0 0.0 4.5717 0.0 0.0 0.0 339.1670907617815 339.1670907617815 18.138429459400047 0.0 0.0 0.0 0 0.5 0.744727494896694 0.0 1.329689690656103 [QA]EV{I|L}V 4.5717 - 1118 1 1.538 168002.8 1.0 2220 5360 7579 SUDHL4_400M_050219_2,7582 SUDHL4_400M_050219_2,7582,IVVDNVPQV True True IVVDNVPQV 40.173096 491.782366931438 4087281.5 7579.0 nc|ENSG00000106263|P55884-2|EIF3B;;ENSG00000106263|ENST00000360876|EIF3B 4.719814936319987 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7583 40.182 532.0 105190.0 25 0 8002.1 -1 0 71 954.4296371683724 1906.8447214035448 2 954.4313232302666 MULTI CID FTMS 0 0 0 7579 148796.875 0.3895387792133631 9 -0.2149085998535156 4 6 [NP]{I|L}N{M(Oxidation (M))|F}[HV]EQEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 53.867 0.0 0.0 2.8249 2.8249 70.989 0.0 0.0 0.0 4.164317917986224 32.41434719156942 4.164317917986224 1.7609125905568137 0 0.8807196863200843 0.0 0.0 0.4247425010840047 [NP]{I|L}N{M(Oxidation (M))|F}[HV]EQEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]EQEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QEEN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]E[WY]{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 2.8249;2.7326;2.1821;2.0897;1.8928 -;-;-;-;- 553 1 1.538 43917.4 1.0 2221 5360 7579 SUDHL4_400M_050219_2,7583 SUDHL4_400M_050219_2,7583, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7585 40.188 88.0 559650.0 25 0 62738.0 -1 HAIPPTLAM 9 86 483.7571500620577 965.4997471909154 2 483.7565490603447 MULTI CID FTMS 0 0 0 7584 446332.125 0.5038310216165823 42 -1.178974151611328 1 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 34.18733598223924 0.1073653526364521 6 {I|L}A{M(Oxidation (M))|F} 3 -1 25.674 0.0 0.0 2.6592 0.0 0.0 616.3327988039998 0.0 616.3327988039998 0.0 3.617646881713768 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}A{M(Oxidation (M))|F} 2.6592 + + 190 + 1 1.538 43572.7 1.0 2222 5361 7584 SUDHL4_400M_050219_2,7585 SUDHL4_400M_050219_2,7585,HAIPPTLAM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7586 40.193 225.0 242660.0 25 0 26670.0 + 20314 LLERVAAW 8 103 479.2775589564674 956.5405649797348 2 479.2773620486259 MULTI CID FTMS 0 0 0 7584 101525.5625 0.4506788999988902 33 -1.0022010803222656 2 Unmodified _LLERVAAW_ REV__ENSG00000127399|ENST00000359623|LRRC61 6.354104778181461 0.7857632046190106 6 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 1.3041 0.0 0.0 791.4613088535615 0.0 791.4613088535615 0.0 -4.973024840566467 -4.973024840566467 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3041 - 47 + 1 1.538 48487.7 1.0 2223 5361 7584 SUDHL4_400M_050219_2,7586 SUDHL4_400M_050219_2,7586,LLERVAAW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7587 40.196 188.0 310650.0 25 0 79230.0 + 10950 GALKETRR 8 88 465.7774866454928 0 465.7776061892509 PEAK CID FTMS 0 0 0 7584 189599.640625 0.7334104435998056 10 -0.2650642395019531 3 Unmodified _GALKETRR_ REV__ENST00000394111.6_1_2:73143662-73143788:+|nuORF 5.760428011301431 0.5786759180849727 6 {I|L} 1 -1 6.9897 0.0 0.0 0.75195 0.0 0.0 464.2810342267293 349.1517428033813 813.4327770301106 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.75195 + + 1 + 1 1.538 49542.9 1.0 2224 5361 7584 SUDHL4_400M_050219_2,7587 SUDHL4_400M_050219_2,7587,GALKETRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7589 40.213 800.0 53487.0 25 0 4532.7 -1 0 61 958.4407594760808 2872.3004490284425 3 959.1100341677666 MULTI CID FTMS 0 0 0 7588 70076.0 0.4702825870625898 6 -0.1438255310058593 1 6 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3 -1 7.4473 0.0 0.0 0.25928 0.0 0.0 2479.167151714554 0.0 2479.167151714554 0.0 3.0102999566398125 0.0 0.0 0 0.0 0.0 0.0 0.0 D{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 0.25928 - 18 1 1.538 40341.6 0.5 2225 5362 7588 SUDHL4_400M_050219_2,7589 SUDHL4_400M_050219_2,7589, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7590 40.224 655.0 202040.0 25 0 30633.0 + + 38851 TVLDKTLSV 9 153 488.2896341777978 974.5647154223956 2 488.2896606326103 MULTI CID FTMS 0 0 0 7588 106211.0078125 0.5210603285127012 -2 0.0495071411132812 2 Unmodified _TVILSGSIVS_ nc|ENSG00000146918|Q86XI2-2|NCAPG2;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;ENSG00000146918|ENST00000356309|NCAPG2;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 43.85829265575387 0.1168243637355526 6 {[TV]|[{I|L}S]}[VG]T{I|L}SVTV 10 -1 + 63.224 0.0 0.0 6.4874 6.4874 84.702 0.0 0.0 0.0 6.289850105233299 6.759687322722812 6.289850105233299 4.023722004121453 0 0.5994850021680094 2.0 1.6593793813122064 0.0 {[TV]|[{I|L}S]}[VG]T{I|L}SVTV;{[TV]|[{I|L}S]}[VG]{I|L}TSVTV;{NN|[MP]|[D{I|L}]|[EV]}KT{I|L}SVTV;{[TV]|[{I|L}S]}MRG{I|L}VTV;{NN|[MP]|[D{I|L}]|[EV]}K{I|L}TSVTV;{[TV]|[{I|L}S]}{I|L}GS{I|L}SVTV;{[TV]|[{I|L}S]}[VG]TS{I|L}VTV;{[TV]|[{I|L}S]}{I|L}GVTSVTV;{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}T{I|L}SVTV;{[TV]|[{I|L}S]}MRR{I|L}TV 6.4874;6.0745;5.842;5.4472;5.4291;5.3972;5.2531;4.9843;4.9233;4.7328 -;-;-;-;-;-;-;-;-;- 1132 1 1.538 105316.3 1.0 2226 5362 7588 SUDHL4_400M_050219_2,7590 SUDHL4_400M_050219_2,7590,TVILSGSIVS False False TVLDKTLSV 40.223917 488.28966063261 1030923.1875 7588.0 nc|ENSG00000146918|Q86XI2-2|NCAPG2;;ENST00000467785.5_1_7:158448006-158486027:-|nuORF;;ENSG00000146918|ENST00000356309|NCAPG2;;ENST00000432615.5_1_7:158447451-158457424:-|nuORF 5.017756779988607 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7592 40.229 122.0 416770.0 25 0 76142.0 + 29378 QKTVMIPP 8 85 457.2642794489496 912.5140059646992 2 457.2643920779228 MULTI CID FTMS 0 0 0 7591 452610.09375 0.7892200348610907 18 -0.4936599731445312 1 Unmodified _QKTVMIPP_ REV__ENSG00000196091|ENST00000361466|MYBPC1;REV__nc|ENSG00000196091|Q00872-10|MYBPC1;REV__nc|ENSG00000196091|Q00872-2|MYBPC1;REV__nc|ENSG00000196091|Q00872-3|MYBPC1;REV__nc|ENSG00000196091|Q00872-5|MYBPC1;REV__nc|ENSG00000196091|Q00872-6|MYBPC1;REV__nc|ENSG00000196091|Q00872-7|MYBPC1;REV__nc|ENSG00000196091|Q00872-8|MYBPC1;REV__nc|ENSG00000196091|Q00872-9|MYBPC1;REV__nc|ENSG00000196091|Q00872|MYBPC1 5.230669730166228 0.792582437072536 6 R 1 -1 1.5938 0.0 0.0 0.17466 0.0 0.0 474.25205635708033 279.14499841861567 753.397054775696 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.17466 - 9 + 1 1.538 45104.6 1.0 2227 5363 7591 SUDHL4_400M_050219_2,7592 SUDHL4_400M_050219_2,7592,QKTVMIPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7593 40.234 250.0 137980.0 25 0 7580.0 18900 LAVQQLDI 8 76 450.26317690877954 898.5118008843591 2 450.2591430544853 MULTI CID FTMS 0 0 0 7591 98543.6015625 0.0406711575255348 28 -0.8423233032226562 2 Unmodified _LAVQQLDI_ ENST00000394635.7_2_4:110678924-110681470:-|nuORF 11.114462752807354 0.7467182956244686 6 [{I|L}A]V 3 5 17.447 0.0 0.0 1.9418 0.0 0.0 0.0 612.2991903709403 612.2991903709403 4.97302484056647 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + [{I|L}A]V 1.9418 + + 58 1 1.538 30558.8 1.0 2228 5363 7591 SUDHL4_400M_050219_2,7593 SUDHL4_400M_050219_2,7593,LAVQQLDI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7594 40.236 91.0 586530.0 25 0 91771.0 28174 PPVNVALA 8 87 390.73336081226375 779.4521686913275 2 390.7328674197197 MULTI CID FTMS 0 0 0 7591 502516.8125 0.5827869344990422 -5 0.1438713073730468 3 Unmodified _PPVNVALA_ ENSG00000187730|ENST00000378585|GABRD 0.7936320650641473 0.8195151834710337 6 C 1 8 5.4846 0.0 0.0 0.70364 0.0 0.0 390.2287322673025 283.19333826236567 673.4220705296682 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.70364 - 1 + 1 1.538 44727.0 1.0 2229 5363 7591 SUDHL4_400M_050219_2,7594 SUDHL4_400M_050219_2,7594,PPVNVALA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7595 40.239 178.0 280820.0 25 0 28562.0 + 34430 SLVWGLLSL 9 80 494.2953534142589 986.5761538953176 2 494.2952758669853 MULTI CID FTMS 0 0 0 7591 197412.375 0.4345485134939739 -6 0.1602401733398437 4 Unmodified _SLVWGLLSL_ REV__nc|ENSG00000177300|Q8N7P3|CLDN22 20.453626601364224 0.2830276176381075 6 {[TV]|[{I|L}S]}VWA{I|L}VTV 9 -1 + 47.335 0.0 0.0 4.7979 4.7979 88.485 0.0 0.0 0.0 14.717262228329552 31.85009691606254 14.717262228329552 31.38788986023457 0 0.7742275032520141 1.3979400086720375 0.2302046884880938 0.0 {[TV]|[{I|L}S]}VWA{I|L}VTV;{[QN]|[E{I|L}]|[KN]}[WK]{I|L}VTV 4.7979;1.6164 -;- 71 1 1.538 44901.8 1.0 2230 5363 7591 SUDHL4_400M_050219_2,7595 SUDHL4_400M_050219_2,7595,SLVWGLLSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7596 40.253 800.0 164200.0 25 0 12511.0 + 11866 GLSTEGIYRV 10 144 547.7956169689378 1093.5766810046755 2 547.7954589724541 MULTI CID FTMS 0 0 0 7591 101399.1640625 0.82549443607762 -2 0.0414505004882812 5 Unmodified _GLSTEGIYRV_ ENSG00000160007|ENST00000672722|ARHGAP35;ENST00000595822.1_1_19:47440583-47491508:+|nuORF 41.95555342248728 0.1369168616057562 6 {[VA]|[{I|L}G]}STEVAVRY 10 4 + 73.765 0.0 0.0 6.7453 6.7453 83.39 0.0 0.0 0.0 24.25968732272281 2.518119729937993 2.518119729937993 2.518119729937993 0 0.7614393726401688 1.6989700043360187 0.4247425010840047 0.0 {[VA]|[{I|L}G]}STEVAVRY;{[VA]|[{I|L}G]}STEVAY[RV];{[VA]|[{I|L}G]}STEG{I|L}VRY;{[VA]|[{I|L}G]}STVEAVRY;{[VA]|[{I|L}G]}STEG{I|L}Y[RV];{[VA]|[{I|L}G]}STVEAY[RV];{[VA]|[{I|L}G]}S[RP]{M(Oxidation (M))|F}VRY;{[VA]|[{I|L}G]}STEV[H{I|L}]PAA;{[VA]|[{I|L}G]}[WM]VAVRY;{[VA]|[{I|L}G]}S[RP]{M(Oxidation (M))|F}Y[RV] 6.7453;6.5151;6.4701;6.309;6.2398;6.0788;4.1593;4.1198;3.9721;3.929 -;-;-;-;+;-;-;-;-;- + 735 + 1 1.538 104062.5 0.5400000214576721 2231 5363 7591 SUDHL4_400M_050219_2,7596 SUDHL4_400M_050219_2,7596,GLSTEGIYRV False True GLSTEGIYRV 40.252921 547.795458972454 564887.875 7591.0 ENST00000595822.1_1_19:47440583-47491508:+|nuORF;;ENSG00000160007|ENST00000672722|ARHGAP35 4.982525547345479 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7598 40.259 107.0 539600.0 25 0 90251.0 + 37918 TLYEAVREV 9 69 540.2894649598835 1078.564376986567 2 540.2901489138603 MULTI CID FTMS 0 0 0 7597 429210.9375 0.2893950166598483 5 -0.1086158752441406 1 Unmodified _TLYEAVREV_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000467020.5_1_6:35436211-35436817:+|nuORF;ENST00000490335.4_1_6:35436211-35436651:+|nuORF 14.40537977576856 0.4467465336100671 6 [{I|L}T]YEAV 6 3 51.159 0.0 0.0 4.7432 0.0 0.0 0.0 399.1993502252563 399.1993502252563 22.954168023219523 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}T]YEAV 4.7432 + + 141 + 1 1.538 47115.9 1.0 2232 5364 7597 SUDHL4_400M_050219_2,7598 SUDHL4_400M_050219_2,7598,TLYEAVREV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7599 40.262 130.0 351730.0 25 0 43188.0 + 43633 YALNHTLSV 9 78 509.2728852195135 1016.531217505827 2 509.2719909548759 MULTI CID FTMS 0 0 0 7597 364345.71875 0.9865118773391348 -1 0.0289878845214843 2 Unmodified _YALNHTLSV_ ENSG00000110777|ENST00000393067|POU2AF1 24.020572477871973 0.2255576514309169 6 [HN]{I|L}T{I|L}S{M(Oxidation (M))|F}[VS] 9 6 + 31.22 0.0 0.0 3.0712 3.0712 69.459 0.0 0.0 0.0 0.5799194697768684 7.147642715192507 0.5799194697768684 0.5799194697768684 0 0.0 0.0 0.3807196863200844 0.0 [HN]{I|L}T{I|L}S{M(Oxidation (M))|F}[VS];{[QV]|[N{I|L}]|[RA]|[KV]}HT{I|L}S{M(Oxidation (M))|F}[VS];[HN]T{I|L}{I|L}S{M(Oxidation (M))|F}[VS];[HN]{I|L}T{I|L}AY[VS];{[QV]|[N{I|L}]|[RA]|[KV]}HT{I|L}AY[VS];[HN]T{I|L}{I|L}AY[VS];[HT]N{I|L}{I|L}S{M(Oxidation (M))|F}[VS];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{M(Oxidation (M))|F}[VS];[HT]N{I|L}{I|L}AY[VS];[HN]{I|L}TAY{I|L}[VS] 3.0712;3.0142;2.898;2.7751;2.718;2.6019;2.6019;2.5443;2.3057;2.2273 -;-;-;-;-;-;-;-;-;- 351 1 1.538 41368.8 1.0 2233 5364 7597 SUDHL4_400M_050219_2,7599 SUDHL4_400M_050219_2,7599,YALNHTLSV False True YALNHTLSV 40.261706 509.271990954876 1699112.875 7597.0 ENSG00000110777|ENST00000393067|POU2AF1 -0.3569238682587941 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7601 40.27 340.0 334480.0 25 0 35918.0 + 34162 SLMDPDTKL 9 112 518.25477016259 1034.49498739198 2 518.2552978396416 MULTI CID FTMS 0 0 0 7600 170312.5625 0.6646550188661343 -2 0.0377769470214843 1 Oxidation (M) _SLM(Oxidation (M))DPDTKL_ ENSG00000111229|ENST00000228825|ARPC3;ENST00000471641.1_1_12:110880867-110888065:-|nuORF;ENST00000475777.2_1_12:110883197-110888065:-|nuORF;ENST00000548878.6_1_12:110874955-110888065:-|nuORF 51.629811660486645 0.0367964933207742 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}D[DP]TK{I|L} 9 0 + 60.295 0.0 0.0 5.8284 5.8284 89.737 0.0 0.0 0.0 32.93900287980519 6.566144790311945 6.566144790311945 12.430380486862944 0 0.9476212463643424 2.0 1.110924374808178 0.0 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}D[DP]TK{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}D[{I|L}V][DN]{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[MG]|[TS]}[HC]K{I|L};{[MS]|[{M(Oxidation (M))|F}A]}ED[DP]TK{I|L};{[MS]|[{M(Oxidation (M))|F}A]}ED[{I|L}V][DN]{I|L};[DP]TK{I|L}DT[{M(Oxidation (M))|F}V];[KT][DP]{I|L}DT[{M(Oxidation (M))|F}V];[DP]TK[{M(Oxidation (M))|F}V]E{[TV]|[{I|L}S]};[KT][DP][{M(Oxidation (M))|F}V]E{[TV]|[{I|L}S]};[DP]TK{I|L}D{M(Oxidation (M))|F}{[TV]|[{I|L}S]} 5.8284;4.6268;3.2977;3.2723;2.0707;1.3434;1.3415;1.0671;1.0652;0.88216 +;-;-;-;-;-;-;-;-;- + 358 + 1 1.538 89302.9 1.0 2234 5365 7600 SUDHL4_400M_050219_2,7601 SUDHL4_400M_050219_2,7601,SLMDPDTKL True False SLMDPDTKL 40.270406 518.255297839642 1474777.5 7600.0 ENST00000475777.2_1_12:110883197-110888065:-|nuORF;;ENSG00000111229|ENST00000228825|ARPC3;;ENST00000471641.1_1_12:110880867-110888065:-|nuORF;;ENST00000548878.6_1_12:110874955-110888065:-|nuORF 7.270372072855632 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7602 40.284 800.0 177240.0 25 0 13882.0 + -1 LMYNWCFLAFY 11 100 772.3435575236343 1542.6725621140686 2 772.3442870974541 MULTI CID FTMS 0 0 0 7600 129972.1484375 0.8929809432243004 -1 0.0087890625 2 Carbamidomethyl (C),Oxidation (M) _LM(Oxidation (M))YNWC(Carbamidomethyl (C))FLAFY_ REV__ENST00000485853.5_1_3:174577149-174974391:+|nuORF;REV__nc|ENSG00000177694|Q58DX5-2|NAALADL2 5.731851221503515 0.8481046878870278 6 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQWNA{M(Oxidation (M))|F}Y 14 -1 + 59.879 0.0 0.0 3.8815 3.8815 76.03 0.0 0.0 0.0 1.1189603443877871 11.52893485947896 1.1189603443877871 3.6575532530063626 0 0.8935078169319297 0.8538719643217619 0.0 0.3054621874040891 {[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQWNA{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQWNA{M(Oxidation (M))|F}Y;{[{M(Oxidation (M))|F}H]|[RQ]}D[TA]QQAD[NS]{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EAQQ[TA]A{M(Oxidation (M))|F}Y;{[{M(Oxidation (M))|F}H]|[RQ]}DNWQW[NS]{M(Oxidation (M))|F}Y;{[QN]|[E{I|L}]|[KN]}A{[DS]|[MA]|[CV]|TT}EAQWNA{M(Oxidation (M))|F}Y;{[{M(Oxidation (M))|F}H]|[RQ]}{[WT]|[RM]}QQAD[NS]{M(Oxidation (M))|F}Y;{[QG]|[NA]}Q{[DS]|[MA]|[CV]|TT}EAQQ[TA]A{M(Oxidation (M))|F}Y;{[{M(Oxidation (M))|F}H]|[RQ]}DNQEKD[NS]{M(Oxidation (M))|F}Y;{[QG]|[NA]}GA{[DS]|[MA]|[CV]|TT}EKEQNA{M(Oxidation (M))|F}Y 3.8815;3.6444;3.6329;3.6042;3.4848;3.4225;3.3975;3.3656;3.3656;3.3337 -;-;-;-;-;-;-;-;-;- 7194 1 1.538 103582.5 0.5600000023841858 2235 5365 7600 SUDHL4_400M_050219_2,7602 SUDHL4_400M_050219_2,7602,LMYNWCFLAFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7603 40.294 541.0 246080.0 25 0 26248.0 + 9527 FLFGEVHKA 9 129 524.2849099824397 1046.5552670316793 2 524.2853271365166 MULTI CID FTMS 0 0 0 7600 117313.2578125 0.4778477198002573 -3 0.0655746459960937 3 Unmodified _FLFGEVHKA_ ENSG00000065328|ENST00000378714|MCM10;nc|ENSG00000065328|Q7L590|MCM10 53.832793166522166 0.0319663582346103 6 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GEVH[KA] 9 0 + 53.979 0.0 0.0 5.1577 5.1577 81.751 0.0 0.0 0.0 31.65233551782262 5.653404750378719 5.653404750378719 5.857116174959145 0 0.805462187404089 0.0 0.6237125054200234 0.2396518287104437 + + {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GEVH[KA];{[TV]|[{I|L}S]}[RP]W{M(Oxidation (M))|F}{I|L}E;[HK]V{[MS]|[{M(Oxidation (M))|F}A]}G{M(Oxidation (M))|F}{I|L}E;[HV]K{[MS]|[{M(Oxidation (M))|F}A]}G{M(Oxidation (M))|F}{I|L}E;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}W[QP]P{I|L};{M(Oxidation (M))|F}{I|L}[HV]K{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F};[HK]ER[HV]{I|L}E;[HV]{[DA]|[EG]}K[HV]{I|L}E;[HK]V{[DA]|[EG]}[HV]{I|L}E;[VG][HT]R[HV]{I|L}E 5.1577;4.5981;3.593;3.2414;3.0745;2.3482;2.0605;1.6868;1.4632;1.4312 +;-;-;-;-;-;-;-;-;- + 656 + 1 1.538 106271.6 1.0 2236 5365 7600 SUDHL4_400M_050219_2,7603 SUDHL4_400M_050219_2,7603,FLFGEVHKA True True FLFGEVHKA 40.293764 524.285327136517 1833680.75 7600.0 ENSG00000065328|ENST00000378714|MCM10;;nc|ENSG00000065328|Q7L590|MCM10 5.531944433848064 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7605 40.31 800.0 94040.0 25 0 7349.6 + 32092 RVLPPSALQSV 11 93 583.8484282491229 0 583.8480712771416 PEAK CID FTMS 0 0 0 7604 81849.46875 0.96423646845365 2 -0.0461807250976562 1 Unmodified _RVLPPSALQSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 46.0223103267499 0.0821528361752149 6 Q{I|L}A 3 9 24.253 0.0 0.0 2.0805 0.0 0.0 204.11414123463692 646.3675188316764 850.4816600663135 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 Q{I|L}A 2.0805 - 68 + 1 1.538 62560.8 0.4900000095367431 2237 5366 7604 SUDHL4_400M_050219_2,7605 SUDHL4_400M_050219_2,7605,RVLPPSALQSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7606 40.315 246.0 237320.0 25 0 19632.0 + 2330 AQKGLQVDL 9 90 486.2798098111637 970.5450666891276 2 486.2794372439384 MULTI CID FTMS 0 0 0 7604 223199.15625 1.0 0 0.0 2 Unmodified _AQKGLQVDL_ ENSG00000104738|ENST00000649973|MCM4 47.74868867922204 0.0453060283459952 6 [QA]VKVAQD{I|L} 9 4 + 60.367 0.0 0.0 6.2199 6.2199 79.764 0.0 0.0 0.0 2.251867549424631 16.478174818886373 2.251867549424631 1.0463498048791564 0 1.3494850021680094 0.0 0.0 0.9247425010840048 [QA]VKVAQD{I|L};[QA]VKAQVD{I|L};[QA]VKAVQD{I|L};{NN|[MP]|[D{I|L}]|[EV]}R{I|L}QVD{I|L};{NN|[MP]|[D{I|L}]|[EV]}R{I|L}VQD{I|L};[QA]VKVA[AG]D{I|L};[QA]VKA[AG]VD{I|L};[QA]VKAV[AG]D{I|L};{NN|[MP]|[D{I|L}]|[EV]}R{I|L}[AG]VD{I|L};{NN|[MP]|[D{I|L}]|[EV]}R{I|L}V[AG]D{I|L} 6.2199;6.1121;6.0622;5.9879;5.9379;5.2711;5.1633;5.1134;5.0335;4.9836 -;-;-;-;-;-;-;-;-;- 279 1 1.538 48941.0 1.0 2238 5366 7604 SUDHL4_400M_050219_2,7606 SUDHL4_400M_050219_2,7606,AQKGLQVDL True True AQKGLQVDL 40.314739 486.279437243938 1056878.375 7604.0 ENSG00000104738|ENST00000649973|MCM4 3.069838762283325 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7607 40.321 326.0 244280.0 25 0 35201.0 + -1 DIDSILLL 8 89 472.2706357465386 942.5267185598772 2 472.2740966677666 MULTI CID FTMS 0 0 0 7604 224284.703125 0.5768123479180144 -22 0.4831733703613281 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))DIDSILLL_ REV__ENST00000381344.7_1_10:1086490-1086559:-|nuORF 10.183394434864962 0.7604730176254005 6 {I|L} 1 -1 11.783 0.0 0.0 1.2501 0.0 0.0 811.4319595040164 0.0 811.4319595040164 0.0 11.78273661756906 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2501 + + 10 + 1 1.538 65065.1 1.0 2239 5366 7604 SUDHL4_400M_050219_2,7607 SUDHL4_400M_050219_2,7607,DIDSILLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7609 40.326 143.0 390510.0 25 0 27809.0 + 42659 VTVPPGPSL 9 100 433.75272576377824 0 433.7527953982353 PEAK CID FTMS 0 0 0 7608 266713.4375 0.0603647156703727 38 -1.1400260925292969 1 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 64.23631603340823 0.0129441640563295 6 PP[TA]E 5 7 15.49 0.0 0.0 1.7897 0.0 0.0 299.1846398641944 68.05126367740468 367.23590354159904 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 PP[TA]E 1.7897 - 124 + 1 1.538 49631.5 1.0 2240 5367 7608 SUDHL4_400M_050219_2,7609 SUDHL4_400M_050219_2,7609,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7610 40.34 800.0 83124.0 25 0 5951.0 + -1 GSFQTPSSF 9 70 956.4177464159252 4777.052349746626 5 957.222216784954 MULTI CID FTMS 0 0 0 7608 46187.7421875 0.4657217731901167 1 -0.019256591796875 2 nc|ENSG00000143437|P27540-3|ARNT;ENSG00000143437|ENST00000358595|ARNT;nc|ENSG00000143437|P27540-4|ARNT;nc|ENSG00000143437|P27540-2|ARNT 6 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.11481 0.0 0.0 3838.648127189788 788.3239229791624 4626.972050168951 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.11481 - 30 + 1 1.538 49929.2 0.4600000083446502 2241 5367 7608 SUDHL4_400M_050219_2,7610 SUDHL4_400M_050219_2,7610, False False GSFQTPSSF 40.339958 957.222216784954 335948.75 7608.0 nc|ENSG00000143437|P27540-3|ARNT;;ENSG00000143437|ENST00000358595|ARNT;;nc|ENSG00000143437|P27540-4|ARNT;;nc|ENSG00000143437|P27540-2|ARNT 5.624544779459636 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7612 40.355 617.0 148260.0 25 0 13273.0 + 44096 YIYKDTIQV 9 113 571.8079010009882 1141.6012490687765 2 571.8088867068291 MULTI CID FTMS 0 0 0 7611 141332.609375 0.4841968929945436 -4 0.0870399475097656 1 Unmodified _YIYKDTIQV_ ENSG00000183742|ENST00000400331|MACC1 71.92227651296345 0.0203558744033348 6 [Y{I|L}]Y{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}QV 9 0 + 52.009 0.0 0.0 4.5558 4.5558 77.59 0.0 0.0 0.0 3.3939438749951734 7.464825806156256 3.3939438749951734 3.3939438749951734 0 1.3129529932484498 2.0 1.079689690656103 0.0 + + [Y{I|L}]Y{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}TKYY{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}TYKY{I|L}QV;[YK]DT{I|L}Y{I|L}QV;{[QD]|[EN]|[WG]|[KD]|[RS]}YT{I|L}Y{I|L}QV;[YK]D[Y{I|L}]T{I|L}QV;[AG]V[DP]{[QD]|[EN]|[WG]|[KD]|[RS]}T{I|L}QV;{[QD]|[EN]|[WG]|[KD]|[RS]}[{I|L}T]YY{I|L}QV;[TA]AYT{I|L}Y{I|L}QV;{[QD]|[EN]|[WG]|[KD]|[RS]}Y[Y{I|L}]T{I|L}QV 4.5558;4.2585;3.5556;3.182;2.8821;2.5234;2.5084;2.4698;2.3547;2.2235 +;-;-;-;-;-;-;-;-;- + 1107 1 1.538 69437.5 1.0 2242 5368 7611 SUDHL4_400M_050219_2,7612 SUDHL4_400M_050219_2,7612,YIYKDTIQV True True YIYKDTIQV 40.354612 571.808886706829 1258030.125 7611.0 ENSG00000183742|ENST00000400331|MACC1 6.423997561136882 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7613 40.362 387.0 179600.0 25 0 45568.0 + 43432 WRVGPATP 8 104 442.2428438815327 0 442.2435790896416 PEAK CID FTMS 0 0 0 7611 126627.9375 1.0 0 0.0 2 Unmodified _WRVGPATP_ REV__ENST00000489226.5_1_9:130485405-130489873:+|nuORF 5.230669730166228 0.5807325378471833 6 {I|L}V 2 -1 7.0783 0.0 0.0 0.8021 0.0 0.0 174.00642643318412 493.29035364322505 667.2967800764092 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}V 0.8021 - 7 + 1 1.538 61404.5 1.0 2243 5368 7611 SUDHL4_400M_050219_2,7613 SUDHL4_400M_050219_2,7613,WRVGPATP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7615 40.371 371.0 152220.0 25 0 17886.0 12440 GTVSRGKPLS 10 105 501.2909857587062 1000.5674185842124 2 501.2913390994072 MULTI CID FTMS 0 0 0 7614 94015.0078125 0.2700320728582461 -11 0.2814750671386719 1 Unmodified _GTVSRGKPLS_ ENSG00000188011|ENST00000343216|RTP5;ENST00000419912.1_1_2:242813297-242815423:+|nuORF 9.38312468134398 0.6832340498775793 6 {[DA]|[EG]}V 3 8 14.895 0.0 0.0 1.4886 0.0 0.0 0.0 712.4053368809383 712.4053368809383 4.298617859337831 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[DA]|[EG]}V 1.4886 - 63 1 1.538 50750.1 1.0 2244 5369 7614 SUDHL4_400M_050219_2,7615 SUDHL4_400M_050219_2,7615,GTVSRGKPLS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7616 40.385 800.0 440330.0 25 0 102410.0 -1 RRDLGFSR 8 226 350.1935766436271 1047.5589005310817 3 350.1933166384697 MULTI CID FTMS 0 0 0 7614 113254.75 1.0 0 0.0 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))RRDLGFSR_ ENST00000395954.3_1_20:52782303-52782354:-|nuORF 8.155526934196011 0.7748286014565968 6 HVEG{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]} 7 -1 32.281 0.0 0.0 3.0815 0.0 0.0 217.14273268867345 0.0 217.14273268867345 0.0 17.403726003536306 0.0 0.0 0 0.0 0.0 0.7059771852360797 0.0 HVEG{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]} 3.0815 - 564 1 1.538 277839.0 0.4000000059604645 2245 5369 7614 SUDHL4_400M_050219_2,7616 SUDHL4_400M_050219_2,7616,RRDLGFSR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7617 40.398 800.0 161280.0 25 0 24901.0 + -1 YVGPSLRM 8 106 469.7413452013114 937.4681374694228 2 469.7415954470634 MULTI CID FTMS 0 0 0 7614 99365.890625 0.4827069194106883 -2 0.04083251953125 3 Oxidation (M) _YVGPSLRM(Oxidation (M))_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5 36.12702656103203 0.299085846329477 6 YVGPS{I|L}R{M(Oxidation (M))|F} 8 -1 + 68.557 0.0 0.0 7.313 7.313 92.99 0.0 0.0 0.0 53.63535075563611 3.3994806169435066 3.3994806169435066 10.11851361900105 0 0.9247425010840048 2.0 0.3494850021680094 0.0 YVGPS{I|L}R{M(Oxidation (M))|F};YV{M(Oxidation (M))|F}RGPS{I|L};YV{M(Oxidation (M))|F}RGSP{I|L};YV{M(Oxidation (M))|F}RGPTV;YVG[W{I|L}]GM{I|L};YV{M(Oxidation (M))|F}{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L};[YV]G[W{I|L}]G{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[PS]H{I|L}SPG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};YR[{M(Oxidation (M))|F}V]GPS{I|L};YR[{M(Oxidation (M))|F}V]GSP{I|L} 7.313;6.2336;6.1594;5.8146;5.6345;4.3371;3.5889;3.3473;2.1573;2.0831 +;-;-;-;-;-;-;-;-;- + 371 + 1 1.538 104794.8 0.4600000083446502 2246 5369 7614 SUDHL4_400M_050219_2,7617 SUDHL4_400M_050219_2,7617,YVGPSLRM False False YVGPSLRM 40.398366 469.741595447063 1215150.375 7614.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 5.610519091288249 2.0 True 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7619 40.403 7.9 6503000.0 25 0 821800.0 24041 LWALLVYNA 9 61 531.8006311487749 1061.5867093643496 2 531.8011962771416 MULTI CID FTMS 0 0 0 7618 6455977.0 0.658805498514774 2 -0.0574150085449218 1 Unmodified _LWALLVYNA_ ENSG00000112414|ENST00000367609|ADGRG6;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6 24.67388899826682 0.2172451872415813 6 VVY{[QG]|[NA]} 5 5 31.466 0.0 0.0 2.964 0.0 0.0 497.29613388705934 0.0 497.29613388705934 0.0 20.76606256887672 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 VVY{[QG]|[NA]} 2.964 - 30 1 1.538 48531.9 1.0 2247 5370 7618 SUDHL4_400M_050219_2,7619 SUDHL4_400M_050219_2,7619,LWALLVYNA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7620 40.411 425.0 159250.0 25 0 15743.0 + -1 LASVLPDMLM 10 100 553.2829398808266 1104.551326828453 2 553.2834350466728 MULTI CID FTMS 0 0 0 7618 94959.6015625 0.1968116071096056 5 -0.17608642578125 2 Oxidation (M) _LASVLPDM(Oxidation (M))LM_ REV__ENSG00000196367|ENST00000456197|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5-2|TRRAP;REV__nc|ENSG00000196367|Q9Y4A5|TRRAP 15.847184025352805 0.5816416552707754 6 YV{M(Oxidation (M))|F}ATT{I|L}KY 9 -1 + 83.7 0.0 0.0 7.5777 7.5777 64.713 0.0 0.0 0.0 0.0 3.815495924838672 0.0 0.0 0 1.066901560044258 2.0 0.0 0.0 YV{M(Oxidation (M))|F}ATT{I|L}KY;VY{M(Oxidation (M))|F}ATT{I|L}KY;YV{M(Oxidation (M))|F}ATTPPP{I|L};VY{M(Oxidation (M))|F}ATTPPP{I|L};VY{M(Oxidation (M))|F}ATT[YK]{I|L};YV{M(Oxidation (M))|F}ATT[YK]{I|L};YV{M(Oxidation (M))|F}VV{[MG]|[TS]}KY;VY{M(Oxidation (M))|F}VV{[MG]|[TS]}KY;VY{[QN]|[E{I|L}]|[KN]}[YQ]KY;YV{[QN]|[E{I|L}]|[KN]}[YQ]KY 7.5777;7.5777;7.2323;7.2323;5.8487;5.8487;5.2313;5.2313;4.0235;4.0235 -;-;-;-;-;-;-;-;-;- 460 + 1 1.538 59250.0 1.0 2248 5370 7618 SUDHL4_400M_050219_2,7620 SUDHL4_400M_050219_2,7620,LASVLPDMLM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7621 40.425 800.0 138590.0 25 0 8489.6 + -1 SLSPIYPAA 9 118 918.4186257963686 1834.822698659537 2 918.4183837771416 MULTI CID FTMS 0 0 0 7618 111995.7265625 0.0457874880965874 -10 0.2517623901367187 3 ENST00000599322.5_1_19:48618908-48621044:-|nuORF;ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-3|LIG1 6 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 95.791 0.0 0.0 5.2207 5.2207 80.703 0.0 0.0 0.0 11.252538394256334 7.659167939666318 7.659167939666318 4.030899869919438 0 1.3979400086720375 1.0 0.3494850021680094 1.1307196863200843 [NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NYYGQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[HV]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV][AG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[HV]QDAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}YT{[WN]|[YH]}QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD[RH]{M(Oxidation (M))|F}Y{I|L}{[QS]|[NT]};[NP]{I|L}N{M(Oxidation (M))|F}N[H{I|L}]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{M(Oxidation (M))|F}[HV]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 5.2207;5.0011;4.7295;4.7295;4.7295;4.7295;4.6075;4.5878;4.5791;4.5117 -;-;-;-;-;-;-;-;-;- 10919 1 1.538 74358.7 0.4900000095367431 2249 5370 7618 SUDHL4_400M_050219_2,7621 SUDHL4_400M_050219_2,7621, False False SLSPIYPAA 40.424595 918.418383777142 1071209.875 7618.0 ENST00000599322.5_1_19:48618908-48621044:-|nuORF;;ENSG00000105486|ENST00000263274|LIG1;;nc|ENSG00000105486|P18858-3|LIG1 -0.2201610257228215 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7622 40.438 800.0 87500.0 25 0 13874.0 -1 0 70 964.4433002476126 2890.3080713430377 3 965.4479858279228 MULTI CID FTMS 0 0 0 7618 125406.0390625 0.2929547975754135 29 -0.8912544250488281 4 6 [NP]VSESVS{M(Oxidation (M))|F} 9 -1 58.466 0.0 0.0 2.0228 0.0 0.0 0.0 1940.8331317280563 1940.8331317280563 36.75296175278838 0.0 0.0 0.0 0 0.0 0.0 1.9802046884880933 0.7059771852360797 [NP]VSESVS{M(Oxidation (M))|F} 2.0228 - 616 1 1.538 58871.4 0.4799999892711639 2250 5370 7618 SUDHL4_400M_050219_2,7622 SUDHL4_400M_050219_2,7622, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7623 40.448 515.0 153950.0 25 0 6307.8 + 29646 QNFKSEVMV 9 131 541.2690490815655 1080.523545229931 2 541.2699462771416 MULTI CID FTMS 0 0 0 7618 104161.609375 1.0 0 0.0 5 Unmodified _QNFKSEVMV_ ENSG00000008118|ENST00000361322|CAMK1G 32.30548876998284 0.1201446275138228 6 [{I|L}T]CK{M(Oxidation (M))|F}V{M(Oxidation (M))|F} 7 6 56.489 0.0 0.0 5.2279 0.0 0.0 0.0 239.0775602394896 239.0775602394896 42.993814365482734 0.0 0.0 0.0 0 1.0 2.0 0.9489700043360187 0.0 [{I|L}T]CK{M(Oxidation (M))|F}V{M(Oxidation (M))|F} 5.2279 - 686 1 1.538 66652.9 1.0 2251 5370 7618 SUDHL4_400M_050219_2,7623 SUDHL4_400M_050219_2,7623,QNFKSEVMV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7625 40.453 77.0 538130.0 25 0 99513.0 + 39246 VAAFAALT 8 78 382.2201765751128 762.4258002170257 2 382.2197143435478 MULTI CID FTMS 0 0 0 7624 808529.625 0.4828094989960125 4 -0.1269302368164062 1 Unmodified _VAAFAALT_ REV__ENSG00000117600|ENST00000370185|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-3|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5|PLPPR4 0.0 0.8243325171867699 6 C 1 -1 0.088644 0.0 0.0 0.011627 0.0 0.0 516.3481004873366 140.04804407291252 656.3961445602491 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.011627 - 1 + 1 1.538 38133.5 1.0 2252 5371 7624 SUDHL4_400M_050219_2,7625 SUDHL4_400M_050219_2,7625,VAAFAALT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7626 40.456 128.0 381310.0 25 0 50871.0 + 12981 HAIPPTLAM 9 81 483.7571500620577 965.4997471909154 2 483.7561828494072 MULTI CID FTMS 0 0 0 7624 389750.3125 0.4399600367601978 52 -1.6131248474121094 2 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 46.92087301778293 0.0471210510596396 6 {I|L}AH{I|L}A{M(Oxidation (M))|F} 6 5 43.382 0.0 0.0 4.4932 0.0 0.0 295.1530018537125 0.0 295.1530018537125 0.0 24.34180968681231 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.0 {I|L}AH{I|L}A{M(Oxidation (M))|F} 4.4932 - 115 1 1.538 40921.2 1.0 2253 5371 7624 SUDHL4_400M_050219_2,7626 SUDHL4_400M_050219_2,7626,HAIPPTLAM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7628 40.461 120.0 501750.0 25 0 68648.0 + 28096 PPLAALAA 8 96 362.2223351809882 722.4301174287765 2 362.2221252322197 MULTI CID FTMS 0 0 0 7627 416619.6875 0.0626878024870804 -6 0.1620254516601562 1 Unmodified _PPLAALAA_ REV__ENSG00000150281|ENST00000279804|CTF1;REV__nc|ENSG00000150281|Q16619-2|CTF1 0.7936320650641473 0.8195151834710337 6 P 1 -1 8.7724 0.0 0.0 1.2143 0.0 0.0 607.3663871204742 0.0 607.3663871204742 0.0 -5.268632101159749 -5.268632101159749 0.0 0 0.0 0.0 0.0 0.0 P 1.2143 + + 7 + 1 1.538 54301.1 1.0 2254 5372 7627 SUDHL4_400M_050219_2,7628 SUDHL4_400M_050219_2,7628,PPLAALAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7629 40.475 800.0 144340.0 25 0 18026.0 19504 LFLPLYVY 8 140 514.2951055157962 1026.5756580983923 2 514.2957031130791 MULTI CID FTMS 0 0 0 7627 65497.52734375 0.2222186394828726 -3 0.094268798828125 2 Unmodified _LFLPLYVY_ ENSG00000038532|ENST00000409790|CLEC16A;nc|ENSG00000038532|Q2KHT3-2|CLEC16A 41.81723621529253 0.2038889569391319 6 [{I|L}A]VAKS{I|L}YY 9 6 + 59.188 0.0 0.0 5.7656 5.7656 79.481 0.0 0.0 0.0 2.839966563652005 16.478174818886373 2.839966563652005 1.7609125905568137 0 0.9247425010840048 0.9208187539523752 0.4247425010840047 0.0 [{I|L}A]VAKS{I|L}YY;[{I|L}A]VKAS{I|L}YY;[{I|L}V]AAKS{I|L}YY;[{I|L}A]VKSA{I|L}YY;[{I|L}V]AKAS{I|L}YY;[{I|L}A]VAKTVYY;{[VA]|[{I|L}G]}{I|L}AKS{I|L}YY;[{I|L}V]AKSA{I|L}YY;[{I|L}A]VKS{I|L}AYY;[{I|L}A]VKATVYY 5.7656;5.5941;5.4889;5.4517;5.3174;5.1791;5.1771;5.1751;5.1585;5.0076 -;-;-;-;-;-;-;-;-;- 1431 1 1.538 90082.6 0.4799999892711639 2255 5372 7627 SUDHL4_400M_050219_2,7629 SUDHL4_400M_050219_2,7629,LFLPLYVY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7630 40.48 277.0 284770.0 25 0 41132.0 9541 FLGIYHLGA 9 84 495.7718879789695 989.5292230247388 2 495.7719909548759 MULTI CID FTMS 0 0 0 7627 259878.5625 0.7375344550514564 -1 0.0082588195800781 3 Unmodified _FLGIYHLGA_ ENSG00000006757|ENST00000381042|PNPLA4 20.871210003555333 0.2717241269066626 6 {[VA]|[{I|L}G]}{[RE]|[WV]}Q{M(Oxidation (M))|F}{I|L}Q 8 7 + 44.084 0.0 0.0 4.4551 4.4551 83.835 0.0 0.0 0.0 5.909126305521646 29.48035785012113 5.909126305521646 9.262137858390808 0 0.9247425010840048 0.721246399047171 0.0 0.0 {[VA]|[{I|L}G]}{[RE]|[WV]}Q{M(Oxidation (M))|F}{I|L}Q;{[VA]|[{I|L}G]}{[RE]|[WV]}[AG]{M(Oxidation (M))|F}{I|L}Q;{[CA]|SS}{I|L}{[ET]|[MV]}{[NV]|[RG]}{I|L}GA;{[CA]|SS}{I|L}{[ET]|[MV]}{[NV]|[RG]}{I|L}Q 4.4551;3.5191;3.1692;2.9913 -;-;-;- 89 1 1.538 66163.1 1.0 2256 5372 7627 SUDHL4_400M_050219_2,7630 SUDHL4_400M_050219_2,7630,FLGIYHLGA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7631 40.485 290.0 190130.0 25 0 26555.0 + 42277 VSQKRKAN 8 94 465.7774866454928 0 465.7772094607353 PEAK CID FTMS 0 0 0 7627 172364.0 0.6667394372896739 21 -0.7179794311523438 4 Unmodified _VSQKRKAN_ REV__ENSG00000047578|ENST00000261588|KATNIP 2.577480529830294 0.5910327097116076 6 {I|L} 1 -1 6.9897 0.0 0.0 0.75195 0.0 0.0 464.2802712872762 349.1517428033813 813.4320140906575 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.75195 - 2 + 1 1.538 45963.1 1.0 2257 5372 7627 SUDHL4_400M_050219_2,7631 SUDHL4_400M_050219_2,7631,VSQKRKAN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7632 40.499 800.0 142130.0 25 0 10705.0 -1 QAFPCCLS 8 145 491.70921788390353 981.4038828346072 2 491.7098571658134 MULTI CID FTMS 0 0 0 7627 112923.375 0.7029823681874502 6 -0.19525146484375 5 2 Carbamidomethyl (C) _QAFPC(Carbamidomethyl (C))C(Carbamidomethyl (C))LS_ ENSG00000180113|ENST00000316081|TDRD6;nc|ENSG00000180113|O60522-2|TDRD6 23.1484247019978 0.5573009939494978 6 [QA]EV{I|L}V 6 -1 34.363 0.0 0.0 3.5014 0.0 0.0 0.0 339.0221439032196 339.0221439032196 17.707669711425066 0.0 0.0 0.0 0 0.5 0.8538719643217619 0.0 0.9476212463643424 [QA]EV{I|L}V 3.5014 - 419 1 1.538 93200.1 0.5199999809265137 2258 5372 7627 SUDHL4_400M_050219_2,7632 SUDHL4_400M_050219_2,7632,QAFPCCLS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7634 40.505 122.0 368970.0 25 0 61635.0 + 29379 QKTVMIPP 8 83 457.2642794489496 912.5140059646992 2 457.2645446658134 MULTI CID FTMS 0 0 0 7633 383671.78125 0.6690117183745237 28 -0.8258705139160156 1 Unmodified _QKTVMIPP_ REV__ENSG00000196091|ENST00000361466|MYBPC1;REV__nc|ENSG00000196091|Q00872-10|MYBPC1;REV__nc|ENSG00000196091|Q00872-2|MYBPC1;REV__nc|ENSG00000196091|Q00872-3|MYBPC1;REV__nc|ENSG00000196091|Q00872-5|MYBPC1;REV__nc|ENSG00000196091|Q00872-6|MYBPC1;REV__nc|ENSG00000196091|Q00872-7|MYBPC1;REV__nc|ENSG00000196091|Q00872-8|MYBPC1;REV__nc|ENSG00000196091|Q00872-9|MYBPC1;REV__nc|ENSG00000196091|Q00872|MYBPC1 5.230669730166228 0.792582437072536 6 R 1 -1 2.4743 0.0 0.0 0.27115 0.0 0.0 474.2530535155122 279.14475427799067 753.3978077935028 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.27115 - 1 + 1 1.538 39463.6 1.0 2259 5373 7633 SUDHL4_400M_050219_2,7634 SUDHL4_400M_050219_2,7634,QKTVMIPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7635 40.517 644.0 134480.0 25 0 11073.0 -1 0 85 874.908188529516 1747.801824125832 2 875.3973876833916 MULTI CID FTMS 0 0 0 7633 105898.59375 0.1590255669091782 -25 0.6027412414550781 2 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NAD[HS]K[HN]{I|L}Q 15 -1 + 58.63 0.0 0.0 3.3545 3.3545 69.754 0.0 0.0 0.0 0.4519390550645497 0.4519390550645497 0.4519390550645497 0.4519390550645497 0 0.0 0.0 0.4247425010840047 1.4361818737241734 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NAD[HS]K[HN]{I|L}Q;[DP]{I|L}NAK[HS]DAN{I|L}DP{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NW[HS]K[HN]{I|L}Q;[DP]{I|L}NAK[HS]WN{I|L}DP{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}PNN{I|L}[HS]DAN{I|L}DP{[QN]|[E{I|L}]|[KN]};[DP]{I|L}NAK[HS]DAGG{I|L}DP{[QN]|[E{I|L}]|[KN]};[DP]{I|L}GGAK[HS]DAN{I|L}DP{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}Q{[QS]|[NT]}[YR]DAN{I|L}DP{[QN]|[E{I|L}]|[KN]};{[TV]|[{I|L}S]}PNN{I|L}[HS]WN{I|L}DP{[QN]|[E{I|L}]|[KN]};[DP]{I|L}NAK[HS]WGG{I|L}DP{[QN]|[E{I|L}]|[KN]} 3.3545;3.3286;2.9717;2.9447;2.8341;2.8129;2.6129;2.5301;2.4502;2.428 -;-;-;-;-;-;-;-;-;- 783 + 1 1.538 63633.9 1.0 2260 5373 7633 SUDHL4_400M_050219_2,7635 SUDHL4_400M_050219_2,7635, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7636 40.53 800.0 84346.0 25 0 8016.6 -1 0 75 599.3070306329064 1794.8992624989191 3 599.6412841677666 MULTI CID FTMS 0 0 0 7633 73545.6328125 0.6456865298762983 -8 0.2371902465820312 3 6 G[MT]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}H{I|L}Q 9 -1 43.906 0.0 0.0 2.4462 0.0 0.0 702.3438587873062 0.0 702.3438587873062 0.0 22.668884535972325 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 G[MT]{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}H{I|L}Q 2.4462 - 123 1 1.538 59625.1 0.4600000083446502 2261 5373 7633 SUDHL4_400M_050219_2,7636 SUDHL4_400M_050219_2,7636, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7637 40.533 128.0 384850.0 25 0 98990.0 + 33774 SLASHIQSL 9 73 478.26411247735297 0 478.2639343142509 PEAK CID FTMS 0 0 0 7633 287321.1875 1.0 0 0.0 4 Unmodified _SLASHIQSL_ ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-3|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4 21.53697664764585 0.1871382778112851 6 QAHD 4 7 17.907 0.0 0.0 1.8761 0.0 0.0 418.2428723162309 82.0667971246703 500.3096694409013 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 QAHD 1.8761 - 138 + 1 1.538 44054.0 1.0 2262 5373 7633 SUDHL4_400M_050219_2,7637 SUDHL4_400M_050219_2,7637,SLASHIQSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7638 40.54 407.0 191960.0 25 0 15574.0 + 14120 IAVEPGNQW 9 131 507.256089241994 1012.497625550788 2 507.2566406130791 MULTI CID FTMS 0 0 0 7633 107124.921875 0.2284058075883554 -6 0.1781959533691406 5 Unmodified _IAVEPGNQW_ ENSG00000171566|ENST00000499023|PLRG1;ENST00000506918.1_1_4:155463230-155466996:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1 24.67388899826682 0.2172451872415813 6 [{I|L}A]VEKVE 7 5 35.934 0.0 0.0 3.5491 0.0 0.0 0.0 241.02598183424416 241.02598183424416 21.330401039223617 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [{I|L}A]VEKVE 3.5491 - 616 1 1.538 67593.3 1.0 2263 5373 7633 SUDHL4_400M_050219_2,7638 SUDHL4_400M_050219_2,7638,IAVEPGNQW False True IAVEPGNQW 40.540238 507.256640613079 2401370.75 7633.0 ENSG00000171566|ENST00000499023|PLRG1;;nc|ENSG00000171566|O43660-2|PLRG1;;ENST00000506918.1_1_4:155463230-155466996:-|nuORF 5.062927802403768 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7640 40.551 480.0 182870.0 25 0 21066.0 + + 14387 HLDEAIHVL 9 113 524.2849099824397 1046.5552670316793 2 524.2853881716728 MULTI CID FTMS 0 0 0 7639 79483.4140625 0.3237568274884135 6 -0.1502571105957031 1 Unmodified _IFFDKHLQ_ ENSG00000071564|ENST00000262965|TCF3;nc|ENSG00000071564|P15923-2|TCF3;nc|ENSG00000071564|P15923-3|TCF3 27.628801355627647 0.4629596117395134 6 [H{I|L}][YQ][{M(Oxidation (M))|F}V]{I|L}Q 8 -1 + 20.123 0.0 0.0 1.9228 1.9228 68.14 0.0 0.0 0.0 0.5926340775231829 6.421039185145101 0.5926340775231829 0.5926340775231829 0 0.0 1.5228787452803376 0.0 0.0 [H{I|L}][YQ][{M(Oxidation (M))|F}V]{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}DKH{I|L}Q;[H{I|L}][KT][NG]H{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YN]{I|L}H{I|L}Q;[H{I|L}][YQ]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V{I|L};[H{I|L}]QQ[Y{M(Oxidation (M))|F}]V{I|L};[H{I|L}][YQ][{M(Oxidation (M))|F}V]G[{I|L}A];[H{I|L}][YQ][VG]A{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}DKHG[{I|L}A];[H{I|L}][YQ][VG]{M(Oxidation (M))|F}[{I|L}A] 1.9228;1.8662;1.7587;1.4657;1.2389;1.0439;0.46253;0.43151;0.4059;0.34315 -;+;-;-;-;-;-;-;-;- + 333 1 1.538 71594.1 1.0 2264 5374 7639 SUDHL4_400M_050219_2,7640 SUDHL4_400M_050219_2,7640,IFFDKHLQ False False HLDEAIHVL 40.551294 524.285388171673 1513121.5 7639.0 ENSG00000071564|ENST00000262965|TCF3;;nc|ENSG00000071564|P15923-2|TCF3;;nc|ENSG00000071564|P15923-3|TCF3 1.8968794345855715 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7641 40.554 141.0 308130.0 25 0 57525.0 19616 LGDDIWII 8 69 472.7567600539263 943.4989671746524 2 472.7564880251884 MULTI CID FTMS 0 0 0 7639 191389.265625 0.7278542142042214 -1 0.0413665771484375 2 Unmodified _LGDDIWII_ ENSG00000104412|ENST00000220853|EMC2;ENST00000517593.5_1_8:109455866-109468189:+|nuORF 20.871210003555333 0.6025813472596342 6 E[DG]{I|L}{I|L} 5 4 31.466 0.0 0.0 3.335 0.0 0.0 398.2272511212906 0.0 398.2272511212906 0.0 27.48651242028324 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 E[DG]{I|L}{I|L} 3.335 - 22 1 1.538 38752.0 1.0 2265 5374 7639 SUDHL4_400M_050219_2,7641 SUDHL4_400M_050219_2,7641,LGDDIWII False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7642 40.561 363.0 145870.0 25 0 9137.6 + 14669 IIPGVWYI 8 100 480.7825879690453 959.5506230048908 2 480.7815429568291 MULTI CID FTMS 0 0 0 7639 108382.71875 0.3177074769254812 -17 0.4765739440917969 3 Unmodified _IIPGVWYI_ REV__ENSG00000171885|ENST00000383168|AQP4;REV__nc|ENSG00000171885|P55087-2|AQP4 2.889219685676258 0.8067950007271085 6 YW 2 -1 10.969 0.0 0.0 1.1431 0.0 0.0 236.1790542566469 371.2047518365844 607.3838060932313 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YW 1.1431 - 25 + 1 1.538 46773.7 1.0 2266 5374 7639 SUDHL4_400M_050219_2,7642 SUDHL4_400M_050219_2,7642,IIPGVWYI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7643 40.574 800.0 106070.0 25 0 30336.0 + 20117 LKGLVPVP 8 97 411.77480584812287 821.5350587630458 2 411.7742187380791 MULTI CID FTMS 0 0 0 7639 91327.03125 0.3817022609648308 -2 0.0844612121582031 4 Unmodified _LKGLVPVP_ REV__ENST00000265052.9_1_3:127408587-127408710:-|nuORF 0.7936320650641473 0.8195151834710337 6 {M(Oxidation (M))|F} 1 -1 12.218 0.0 0.0 1.4873 0.0 0.0 656.4557873780833 0.0 656.4557873780833 0.0 2.464577609514471 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.4873 - 14 + 1 1.538 71129.0 0.75 2267 5374 7639 SUDHL4_400M_050219_2,7643 SUDHL4_400M_050219_2,7643,LKGLVPVP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7645 40.591 800.0 108770.0 25 0 10950.0 + 43766 YEIHDGMNL 9 118 554.2427416920183 1106.4709304508365 2 554.2424194216728 MULTI CID FTMS 0 0 0 7644 101215.4921875 0.9244198910796246 1 -0.0474510192871093 1 Oxidation (M) _YEIHDGM(Oxidation (M))NL_ ENSG00000198258|ENST00000586895|UBL5 47.74868867922204 0.0453060283459952 6 [YE][H{I|L}]DG{M(Oxidation (M))|F}N{I|L} 9 0 + 47.36 0.0 0.0 4.2803 4.2803 79.306 0.0 0.0 0.0 7.7549896402664515 13.46787486224656 7.7549896402664515 6.355830254716253 0 0.7059771852360797 2.0 0.0 0.0 + + [YE][H{I|L}]DG{M(Oxidation (M))|F}N{I|L};[YE]{[YD]|[{M(Oxidation (M))|F}M]}KYN{I|L};{NN|[MP]|[D{I|L}]|[EV]}H[YE]G{M(Oxidation (M))|F}N{I|L};[YE][H{I|L}]DG{M(Oxidation (M))|F}GG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WQ]DG{M(Oxidation (M))|F}N{I|L};[YE]{[YD]|[{M(Oxidation (M))|F}M]}KYGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}H[YE]G{M(Oxidation (M))|F}GG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PS]AACG{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}H{[CT]|[{M(Oxidation (M))|F}G]}EYN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[PS][MN]G{M(Oxidation (M))|F}N{I|L} 4.2803;3.7059;3.5794;3.4481;3.2611;2.8688;2.7472;2.6907;2.6294;2.5276 +;-;-;-;-;-;-;-;-;- + 841 1 1.538 69541.5 0.5400000214576721 2268 5375 7644 SUDHL4_400M_050219_2,7645 SUDHL4_400M_050219_2,7645,YEIHDGMNL True False YEIHDGMNL 40.59085 554.242419421673 537356.1875 7644.0 ENSG00000198258|ENST00000586895|UBL5 6.767023881276448 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7646 40.602 611.0 205120.0 25 0 17646.0 + 29496 QLLAQLQL 8 142 463.7869954401326 925.5594379470652 2 463.7869140505791 MULTI CID FTMS 0 0 0 7644 137347.25 1.0 0 0.0 2 Unmodified _QLLAQLQL_ REV__ENSG00000130396|ENST00000683244|AFDN;REV__nc|ENSG00000130396|P55196-1|AFDN;REV__nc|ENSG00000130396|P55196-2|AFDN;REV__nc|ENSG00000130396|P55196-3|AFDN;REV__nc|ENSG00000130396|P55196-5|AFDN;REV__nc|ENSG00000130396|P55196-6|AFDN;REV__nc|ENSG00000130396|P55196|AFDN 42.09456458481378 0.1992492688217789 6 AAVA{I|L}Q{I|L}[Q{I|L}] 9 -1 + 31.814 0.0 0.0 3.4373 3.4373 77.331 0.0 0.0 0.0 12.9227589307525 4.762036441594198 4.762036441594198 6.787666182477324 0 0.805462187404089 0.958607314841775 0.0 0.3494850021680094 AAVA{I|L}Q{I|L}[Q{I|L}];AAVS[KP]{I|L}[Q{I|L}];AA[{I|L}A]VQ{I|L}[Q{I|L}];AAVA{I|L}[AG]{I|L}[Q{I|L}];[VP][KT]Q{I|L}[Q{I|L}];[Q{I|L}]A{I|L}Q{I|L}[Q{I|L}];[KP]TVQ{I|L}[Q{I|L}];[{I|L}A]GA{I|L}Q{I|L}[Q{I|L}];[KP]S{I|L}Q{I|L}[Q{I|L}];[Q{I|L}]S[KP]{I|L}[Q{I|L}] 3.4373;2.7039;2.4566;2.0648;2.0411;2.0269;1.9061;1.6399;1.2964;1.2935 -;-;-;-;-;-;-;-;-;- 207 1 1.538 100984.1 1.0 2269 5375 7644 SUDHL4_400M_050219_2,7646 SUDHL4_400M_050219_2,7646,QLLAQLQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7647 40.615 770.0 159580.0 25 0 14767.0 + 1394 ALASVAYQV 9 130 461.25528241035255 920.4960118875052 2 461.2553893923759 MULTI CID FTMS 0 0 0 7644 124346.078125 1.0 0 0.0 3 Unmodified _ALASVAYQV_ ENSG00000108798|ENST00000225941|ABI3;nc|ENSG00000108798|Q9P2A4-2|ABI3 38.15118350030904 0.0856056900103839 6 [{I|L}A][SG]A{I|L} 6 5 19.656 0.0 0.0 2.1354 0.0 0.0 0.0 405.17787158893015 405.17787158893015 4.740507461446317 0.0 0.0 0.0 0 0.2614393726401688 1.6989700043360187 0.8703715150305282 0.0 [{I|L}A][SG]A{I|L} 2.1354 - 284 1 1.538 99363.9 1.0 2270 5375 7644 SUDHL4_400M_050219_2,7647 SUDHL4_400M_050219_2,7647,ALASVAYQV True True ALASVAYQV 40.614846 461.255389392376 615006.6875 7644.0 nc|ENSG00000108798|Q9P2A4-2|ABI3;;ENSG00000108798|ENST00000225941|ABI3 1.3009634415308635 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7648 40.622 396.0 234530.0 25 0 26678.0 + 14482 IGGAAKIK 8 123 379.2487512181031 756.4829495030061 2 379.2484924197197 MULTI CID FTMS 0 0 0 7644 87318.1796875 0.4213469286538215 -2 0.0755767822265625 4 Unmodified _IGGAAKIK_ REV__ENSG00000113552|ENST00000311337|GNPDA1;REV__ENSG00000154330|ENST00000396396|PGM5;REV__ENST00000507559.1_1_5:141384487-141385853:-|nuORF;REV__ENST00000604870.6_1_9:70993123-71019929:+|nuORF;REV__nc|ENSG00000154330|Q15124-2|PGM5 0.7936320650641473 0.8195151834710337 6 P 1 -1 11.42 0.0 0.0 1.5096 0.0 0.0 641.4193412650163 0.0 641.4193412650163 0.0 1.8158895120641283 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.5096 - 19 + 1 1.538 77847.5 1.0 2271 5375 7644 SUDHL4_400M_050219_2,7648 SUDHL4_400M_050219_2,7648,IGGAAKIK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7650 40.628 115.0 371420.0 25 0 52084.0 + 11590 GKPSEKRSL 9 82 501.2909857587062 1000.5674185842124 2 501.2906677126884 MULTI CID FTMS 0 0 0 7649 297156.375 0.8534993909091986 -4 0.1661224365234375 1 Unmodified _GKPSEKRSL_ REV__nc|ENSG00000198363|Q12797-3|ASPH;REV__nc|ENSG00000198363|Q12797-4|ASPH 7.910154910731844 0.6385446671287552 6 S{I|L} 2 -1 16.594 0.0 0.0 1.6584 0.0 0.0 782.4403261543281 0.0 782.4403261543281 0.0 4.119543704721593 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 S{I|L} 1.6584 + + 17 + 1 1.538 37953.8 1.0 2272 5376 7649 SUDHL4_400M_050219_2,7650 SUDHL4_400M_050219_2,7650,GKPSEKRSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7651 40.632 186.0 293510.0 25 0 36500.0 + 42660 VTVPPGPSL 9 83 433.75272576377824 0 433.7527038455009 PEAK CID FTMS 0 0 0 7649 303893.71875 0.068779653917347 47 -1.4387435913085938 2 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 67.34385681178166 0.0146349057813071 6 P[PG]PS 5 4 13.357 0.0 0.0 1.5433 0.0 0.0 299.184332287519 128.07190881900627 427.2562411065253 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.3703715150305282 0.0 + P[PG]PS 1.5433 + + 63 + 1 1.538 48338.1 1.0 2273 5376 7649 SUDHL4_400M_050219_2,7651 SUDHL4_400M_050219_2,7651,VTVPPGPSL True True VTVPPGPSL 40.631791 433.752703845501 387396664.0 7649.0 nc|ENSG00000159352|P55036-2|PSMD4;;ENSG00000159352|ENST00000368884|PSMD4;;nc|ENSG00000180764|A2A3N6|PIPSL;;ENST00000480546.1_1_10:95718567-95721153:-|nuORF 8.537150224049887 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7652 40.635 143.0 331680.0 25 0 41879.0 + 1542 ALKPDLVNV 9 83 484.7925983425816 967.5706437519632 2 484.7924682497978 MULTI CID FTMS 0 0 0 7649 447173.28125 1.0 0 0.0 3 Unmodified _ALKPDLVNV_ ENSG00000101868|ENST00000379068|POLA1;ENST00000493342.1_1_X:24745055-24752029:+|nuORF;nc|ENSG00000101868|P09884|POLA1 20.453626601364224 0.2830276176381075 6 [DP]{I|L}K[{I|L}A]VNV 9 4 [DP]{I|L}K[{I|L}A]V + + 23.227 3.0856 0.41899 2.4005 2.4005 50.717 0.0 0.0 0.0 0.0 3.8413498884323616 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 [DP]{I|L}K[{I|L}A]VNV 2.4005 - 152 + 1 1.538 42270.8 1.0 2274 5376 7649 SUDHL4_400M_050219_2,7652 SUDHL4_400M_050219_2,7652,ALKPDLVNV False True ALKPDLVNV 40.634664 484.792468249798 3299412.75 7649.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1;;ENST00000493342.1_1_X:24745055-24752029:+|nuORF 2.60297425587972 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7654 40.651 800.0 234440.0 25 0 13030.0 + -1 RRCMAVFCSFY 11 130 756.8281814710886 1511.641810008977 2 756.8297607302666 MULTI CID FTMS 0 0 0 7653 93859.328125 0.2830002907738749 -7 0.2362747192382812 1 2 Carbamidomethyl (C),Oxidation (M) _RRC(Carbamidomethyl (C))M(Oxidation (M))AVFC(Carbamidomethyl (C))SFY_ REV__ENSG00000171316|ENST00000423902|CHD7 2.9952420565917617 0.861016188266951 6 [PS]GSV{[C(Carbamidomethyl (C))G]|[NC]}AQQNA{M(Oxidation (M))|F} 13 -1 66.517 0.0 0.0 4.4003 0.0 0.0 0.0 205.0728152182145 205.0728152182145 45.34534330379857 0.0 0.0 0.0 0 0.3807196863200844 0.5686362358410126 1.1610892374447828 0.8494850021680094 [PS]GSV{[C(Carbamidomethyl (C))G]|[NC]}AQQNA{M(Oxidation (M))|F} 4.4003 - 6367 1 1.538 132977.8 0.5299999713897705 2275 5377 7653 SUDHL4_400M_050219_2,7654 SUDHL4_400M_050219_2,7654,RRCMAVFCSFY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7657 40.66 91.0 596550.0 25 0 63858.0 24042 LWALLVYNA 9 76 531.8006311487749 1061.5867093643496 2 531.8008911013603 MULTI CID FTMS 0 0 0 7656 397735.46875 0.0405872440014657 11 -0.3411827087402344 1 Unmodified _LWALLVYNA_ ENSG00000112414|ENST00000367609|ADGRG6;nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6 24.67388899826682 0.2172451872415813 6 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]VVY{[QG]|[NA]} 9 3 + 35.334 0.0 0.0 3.3284 3.3284 84.209 0.0 0.0 0.0 4.29779863479898 20.34082975213093 4.29779863479898 35.333651886332945 0 0.805462187404089 1.154901959985743 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]VVY{[QG]|[NA]} 3.3284 - 166 1 1.538 47462.4 1.0 2276 5379 7656 SUDHL4_400M_050219_2,7657 SUDHL4_400M_050219_2,7657,LWALLVYNA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7658 40.674 800.0 126910.0 25 0 26580.0 + 18781 LAPGKLGL 8 140 384.7512172228381 767.4878815124763 2 384.7513305544853 MULTI CID FTMS 0 0 0 7656 72573.84375 0.8348406285992831 1 -0.035400390625 2 Unmodified _LAPGKLGL_ REV__ENSG00000188522|ENST00000388995|FAM83G;REV__ENST00000399096.2_1_17:18880803-18882234:-|nuORF;REV__nc|ENSG00000188522|A6ND36-2|FAM83G 0.7936320650641473 0.8195151834710337 6 {I|L} 1 -1 8.2103 0.0 0.0 1.0698 0.0 0.0 636.3927104693107 0.0 636.3927104693107 0.0 6.6165319518756665 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0698 + + 6 + 1 1.538 83461.0 0.3700000047683716 2277 5379 7656 SUDHL4_400M_050219_2,7658 SUDHL4_400M_050219_2,7658,LAPGKLGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7659 40.677 149.0 290750.0 25 0 35728.0 39469 VAQATGRQL 9 82 472.2706357465386 942.5267185598772 2 472.2700378298759 MULTI CID FTMS 0 0 0 7656 171302.3125 0.4405529565778781 -9 0.2567329406738281 3 Unmodified _VAQATGRQL_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 7.910154910731844 0.6385446671287552 6 {I|L} 1 8 14.604 0.0 0.0 1.5495 0.0 0.0 811.4317763985476 0.0 811.4317763985476 0.0 1.6722687557546578 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.5495 + + 74 + 1 1.538 37929.9 1.0 2278 5379 7656 SUDHL4_400M_050219_2,7659 SUDHL4_400M_050219_2,7659,VAQATGRQL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7660 40.691 800.0 167110.0 25 0 15566.0 + 34227 SLPPGVHISY 10 131 535.2876614018917 1068.5607698705833 2 535.2873412966728 MULTI CID FTMS 0 0 0 7656 109180.5859375 0.8680032834166713 -3 0.0331954956054687 4 Unmodified _SLPPGVHISY_ ENSG00000139626|ENST00000267082|ITGB7;ENST00000548269.1_1_12:53587490-53588125:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7 37.97399986684836 0.1789611706409123 6 {[TV]|[{I|L}S]}WT{I|L}SYS{I|L} 9 7 + 56.806 0.0 0.0 5.3161 5.3161 89.376 0.0 0.0 0.0 13.226825097560422 39.716519106993 13.226825097560422 20.21652514092061 0 0.6237125054200235 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}WT{I|L}SYS{I|L};{[TV]|[{I|L}S]}P[NG]{I|L}HKG{M(Oxidation (M))|F};{[TV]|[{I|L}S]}P[NG]{I|L}P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};{[TV]|[{I|L}S]}P[NG]P{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};{[TV]|[{I|L}S]}P{[{M(Oxidation (M))|F}H]|[RQ]}HKG{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[HM]{I|L}HKG{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[HM]{I|L}P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};{[TV]|[{I|L}S]}P{[{M(Oxidation (M))|F}H]|[RQ]}P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};{[TV]|[{I|L}S]}[HM]P{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L};{[TV]|[{I|L}S]}P[HM]{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L} 5.3161;3.4242;3.2165;2.9348;2.8129;2.8129;2.6052;2.6052;2.3235;2.3235 -;-;-;-;-;-;-;-;-;- 396 1 1.538 105205.9 0.5099999904632568 2279 5379 7656 SUDHL4_400M_050219_2,7660 SUDHL4_400M_050219_2,7660,SLPPGVHISY False True SLPPGVHISY 40.690522 535.287341296673 1273474.75 7656.0 nc|ENSG00000139626|P26010-2|ITGB7;;ENSG00000139626|ENST00000267082|ITGB7;;ENST00000548269.1_1_12:53587490-53588125:-|nuORF 0.9535744662086169 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7662 40.695 27.0 1692100.0 25 0 120060.0 -1 0 55 918.4186257963686 1834.822698659537 2 918.9218627810478 MULTI CID FTMS 0 0 0 7661 2302843.5 0.895702407446465 3 -0.0705833435058593 1 6 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 43.136 0.0 0.0 2.351 0.0 0.0 949.4633012780964 0.0 949.4633012780964 0.0 26.938200260161125 0.0 0.0 0 0.5 0.0 0.0 0.0 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 2.351 - 103 1 1.538 35917.6 1.0 2280 5380 7661 SUDHL4_400M_050219_2,7662 SUDHL4_400M_050219_2,7662, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7663 40.698 93.0 463780.0 25 0 35146.0 + -1 IVMQEVETV 9 81 532.2711744601485 0 532.2711059451103 PEAK CID FTMS 0 0 0 7661 338440.53125 0.9348696075749484 -1 0.035400390625 2 Oxidation (M) _IVM(Oxidation (M))QEVETV_ ENSG00000197102|ENST00000360184|DYNC1H1 32.30548876998284 0.0995446103270859 6 YVV 3 -1 14.693 0.0 0.0 1.3828 0.0 0.0 204.0320206958844 494.2734774225219 698.3054981184063 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YVV 1.3828 - 93 + 1 1.538 41885.9 1.0 2281 5380 7661 SUDHL4_400M_050219_2,7663 SUDHL4_400M_050219_2,7663,IVMQEVETV False False IVMQEVETV 40.697689 532.27110594511 1828990.25 7661.0 ENSG00000197102|ENST00000360184|DYNC1H1 7.2239580154418945 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7664 40.704 335.0 193980.0 25 0 30197.0 + -1 VLMEDRLTNRL 11 84 459.2503854978088 1374.7293270936264 3 459.2508727908134 MULTI CID FTMS 0 0 0 7661 138120.984375 0.8966238695516344 -1 0.035400390625 3 Oxidation (M) _VLM(Oxidation (M))EDRLTNRL_ nc|ENSG00000120063|Q14344-2|GNA13;ENSG00000120063|ENST00000439174|GNA13 10.016264844850085 0.8267966916588064 6 V{I|L}{M(Oxidation (M))|F}ED 5 -1 54.825 0.0 0.0 3.9881 0.0 0.0 0.0 768.4483342661222 768.4483342661222 28.62756757724155 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 V{I|L}{M(Oxidation (M))|F}ED 3.9881 + + 58 + 1 1.538 59998.0 1.0 2282 5380 7661 SUDHL4_400M_050219_2,7664 SUDHL4_400M_050219_2,7664,VLMEDRLTNRL False False VLMEDRLTNRL 40.703753 459.250872790813 1029761.75 7661.0 nc|ENSG00000120063|Q14344-2|GNA13;;ENSG00000120063|ENST00000439174|GNA13 4.393092791239421 3.0 True 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7665 40.718 800.0 86448.0 25 0 4760.2 + 9550 FLHDGQEYTL 10 102 611.7906702009186 1221.5667874686371 2 612.2921630740166 MULTI CID FTMS 0 0 0 7661 76684.7734375 1.0 0 0.0 4 Unmodified _FLHDGQEYTL_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 23.78978130925829 0.4341852049148378 6 {[QS]|[NT]}[TP]VWEYT 9 7 21.07 0.0 0.0 1.7249 0.0 0.0 0.0 127.06676240443711 127.06676240443711 -0.3696778598546117 0.0 -0.3696778598546117 0.0 0 0.0 0.0 0.7302046884880938 0.5731074559755159 {[QS]|[NT]}[TP]VWEYT 1.7249 - 521 1 1.538 59117.0 0.4300000071525574 2283 5380 7661 SUDHL4_400M_050219_2,7665 SUDHL4_400M_050219_2,7665,FLHDGQEYTL False True FLHDGQEYTL 40.717591 612.292163074017 620705.1875 7661.0 nc|ENSG00000155657|Q8WZ42-3|TTN;;nc|ENSG00000155657|Q8WZ42-13|TTN;;nc|ENSG00000155657|Q8WZ42-9|TTN;;nc|ENSG00000155657|Q8WZ42-12|TTN;;nc|ENSG00000155657|Q8WZ42-4|TTN;;nc|ENSG00000155657|Q8WZ42-5|TTN;;nc|ENSG00000155657|Q8WZ42-11|TTN;;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant;;nc|ENSG00000155657|Q8WZ42-10|TTN;;ENSG00000155657|ENST00000589042|TTN;;nc|ENSG00000155657|Q8WZ42-2|TTN;;nc|ENSG00000155657|Q8WZ42-6|TTN;;nc|ENSG00000155657|Q8WZ42-7|TTN;;nc|ENSG00000155657|Q8WZ42|TTN;;nc|ENSG00000155657|Q8WZ42-8|TTN 5.478699604670207 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7667 40.722 11.0 3417600.0 25 0 865930.0 + 42862 VVLGPPAA 8 51 362.2223351809882 722.4301174287765 2 362.2222167849541 MULTI CID FTMS 0 0 0 7666 5162981.5 0.7768619060193848 3 -0.06787109375 1 Unmodified _VVLGPPAA_ REV__ENST00000468758.1_1_2:134877558-135010718:+|nuORF;REV__ENST00000481801.5_1_2:134877633-135011843:+|nuORF 0.0 0.8243325171867699 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.538 36136.7 1.0 2284 5381 7666 SUDHL4_400M_050219_2,7667 SUDHL4_400M_050219_2,7667,VVLGPPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7668 40.728 283.0 189430.0 25 0 18055.0 14125 IAVHLFGASL 10 96 514.2984335679752 1026.5823142027502 2 514.2957641482353 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _IAVHLFGASL_ nc|ENSG00000090487|Q9NZD8-2|SPG21 21.74664581756881 0.480091245866545 6 [{I|L}A]VAKTVYY 9 7 + 41.55 0.0 0.0 4.0474 4.0474 75.434 0.0 0.0 0.0 1.3115083373151748 26.06546232138428 1.3115083373151748 3.010299956639805 0 1.0 1.5228787452803376 0.0 0.0 [{I|L}A]VAKTVYY;[{I|L}A]VAKS{I|L}YY;[{I|L}A]VAKSY{I|L}Y;[{I|L}A]V[KS]A{I|L}YY;[{I|L}A]V[KS]{I|L}AYY;[{I|L}A]V[KS]AY{I|L}Y 4.0474;3.7542;3.2839;2.5433;2.4489;2.073 -;-;-;-;-;- 267 1 1.538 49706.7 1.0 2285 5381 7666 SUDHL4_400M_050219_2,7668 SUDHL4_400M_050219_2,7668,IAVHLFGASL False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 7669 40.73 92.0 469290.0 25 0 36952.0 + 45318 YSHLPVSSL 9 74 501.7664134221495 1001.5182739110992 2 501.7668029665947 MULTI CID FTMS 0 0 0 7666 295127.78125 0.5295403225119129 -5 0.0956649780273437 3 Unmodified _YSHLPVSSL_ ENSG00000113916|ENST00000406870|BCL6;nc|ENSG00000113916|P41182-2|BCL6 21.74664581756881 0.2544899275067181 6 S{I|L} 2 7 19.085 0.0 0.0 1.9056 0.0 0.0 783.3911509636366 0.0 783.3911509636366 0.0 2.402704834924073 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 + S{I|L} 1.9056 + + 59 + 1 1.538 37986.0 1.0 2286 5381 7666 SUDHL4_400M_050219_2,7669 SUDHL4_400M_050219_2,7669,YSHLPVSSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7670 40.741 631.0 169530.0 25 0 12794.0 -1 0 84 874.908188529516 1747.801824125832 2 874.9076415896416 MULTI CID FTMS 0 0 0 7666 139256.765625 0.1281087133611356 -18 0.4936599731445312 4 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NADQ[RD]G{M(Oxidation (M))|F}{I|L}Q 15 -1 + 94.171 0.0 0.0 5.388 5.388 84.998 0.0 0.0 0.0 7.61760834195475 12.83809673312028 7.61760834195475 9.030899869919438 0 1.174742501084005 0.0 0.7302046884880937 1.3851518780601924 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NADQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}GGADQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NAD[AG][RD]G{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NWQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PDN{I|L}ADQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}NW[AG][RD]G{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PD{I|L}GGWQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PDGG{I|L}ADQ[RD]G{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PDN{I|L}AD[AG][RD]G{M(Oxidation (M))|F}{I|L}Q;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PDN{I|L}WQ[RD]G{M(Oxidation (M))|F}{I|L}Q 5.388;4.8713;4.8713;4.8191;4.7549;4.3013;4.3013;4.2382;4.2382;4.186 -;-;-;-;-;-;-;-;-;- 1656 + 1 1.538 75672.7 1.0 2287 5381 7666 SUDHL4_400M_050219_2,7670 SUDHL4_400M_050219_2,7670, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7672 40.753 566.0 156390.0 25 0 13653.0 + 39247 VAAFAALT 8 144 382.2201765751128 762.4258002170257 2 382.2199279665947 MULTI CID FTMS 0 0 0 7671 89919.96875 0.0536952681998814 15 -0.4841346740722656 1 Unmodified _VAAFAALT_ REV__ENSG00000117600|ENST00000370185|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5-3|PLPPR4;REV__nc|ENSG00000117600|Q7Z2D5|PLPPR4 0.0 0.8243325171867699 6 {M(Oxidation (M))|F} 1 -1 8.8735 0.0 0.0 1.1638 0.0 0.0 597.3829973379226 0.0 597.3829973379226 0.0 5.774509799928715 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1638 + + 14 + 1 1.538 73708.3 1.0 2288 5382 7671 SUDHL4_400M_050219_2,7672 SUDHL4_400M_050219_2,7672,VAAFAALT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7673 40.761 449.0 183330.0 25 0 13307.0 -1 0 81 925.4275450404784 1848.8405371477563 2 925.9296752810478 MULTI CID FTMS 0 0 0 7671 183353.296875 0.1701326501627354 -6 0.1187171936035156 2 6 RQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 10 -1 56.235 0.0 0.0 3.0416 0.0 0.0 665.3013783185562 0.0 665.3013783185562 0.0 36.4852575047756 0.0 0.0 0 1.0 0.0 0.0 0.805462187404089 RQAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.0416 - 588 1 1.538 59903.0 1.0 2289 5382 7671 SUDHL4_400M_050219_2,7673 SUDHL4_400M_050219_2,7673, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7675 40.767 114.0 385450.0 25 0 69251.0 + 31895 RTPPIWAA 8 69 456.2565762900499 910.4985996468998 2 456.2565490603447 MULTI CID FTMS 0 0 0 7674 406810.5625 0.5865121741728688 -3 0.0705833435058593 1 Unmodified _RTPPIWAA_ REV__ENSG00000163520|ENST00000404922|FBLN2;REV__nc|ENSG00000163520|P98095|FBLN2 2.889219685676258 0.8067950007271085 6 T 1 -1 4.6041 0.0 0.0 0.50567 0.0 0.0 354.1930099025623 452.2488527547777 806.44186265734 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.50567 + + 4 + 1 1.538 39985.9 1.0 2290 5383 7674 SUDHL4_400M_050219_2,7675 SUDHL4_400M_050219_2,7675,RTPPIWAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7676 40.772 227.0 225400.0 25 0 20468.0 + + 9580 FLDITNPKA 9 78 509.803698958896 1017.592844984592 2 509.8040954470634 MULTI CID FTMS 0 0 0 7674 146782.921875 1.0 0 0.0 2 Unmodified _FLISRSPKA_ ENSG00000070010|ENST00000263202|UFD1;ENST00000459854.5_1_22:19442175-19463025:-|nuORF;nc|ENSG00000070010|Q92890-3|UFD1;nc|ENSG00000070010|Q92890-1|UFD1;ENST00000489406.1_1_22:19455337-19466647:-|nuORF 7.910154910731844 0.6385446671287552 6 D{I|L}TNP[KA] 7 -1 24.734 0.0 0.0 2.4307 0.0 0.0 260.19615478705174 0.0 260.19615478705174 0.0 10.467523297860431 0.0 0.0 0 0.0 0.0 0.0 0.2302046884880938 D{I|L}TNP[KA] 2.4307 - 78 + 1 1.538 42138.4 1.0 2291 5383 7674 SUDHL4_400M_050219_2,7676 SUDHL4_400M_050219_2,7676,FLISRSPKA False False FLDITNPKA 40.771632 509.804095447063 2018597.375 7674.0 ENSG00000070010|ENST00000263202|UFD1;;ENST00000459854.5_1_22:19442175-19463025:-|nuORF;;nc|ENSG00000070010|Q92890-3|UFD1;;nc|ENSG00000070010|Q92890-1|UFD1;;ENST00000489406.1_1_22:19455337-19466647:-|nuORF 7.047247091929118 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7677 40.785 800.0 194070.0 25 0 16924.0 + + 13462 HLSDAIVEV 9 148 491.762659382828 981.510765832456 2 491.7631103396416 MULTI CID FTMS 0 0 0 7674 96278.6015625 0.5679891690095404 -1 0.0204620361328125 3 Unmodified _HLSDALVEV_ ENSG00000105778|ENST00000318709|AVL9;nc|ENSG00000105778|Q8NBF6-2|AVL9 61.357469665136826 0.0253304979873734 6 [H{I|L}]SDA{I|L}VEV 9 -1 + 67.094 0.0 0.0 6.8357 6.8357 81.306 0.0 0.0 0.0 0.9834226936873732 16.478174818886373 0.9834226936873732 0.9834226936873732 0 0.9049471895720984 1.0969100130080565 0.3252574989159953 0.0 [H{I|L}]SDA{I|L}VEV;{NN|[MP]|[D{I|L}]|[EV]}{[SA]|[TG]}H{I|L}VEV;{NN|[MP]|[D{I|L}]|[EV]}[HS]A{I|L}VEV;{[TV]|[{I|L}S]}HDA{I|L}VEV;[H{I|L}]SDAV{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}{[SA]|[TG]}HV{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[HS]AV{I|L}EV;{[TV]|[{I|L}S]}{[DA]|[EG]}H{I|L}VEV;{[TV]|[{I|L}S]}HDAV{I|L}EV;{[TV]|[{I|L}S]}{[DA]|[EG]}HV{I|L}EV 6.8357;6.7356;6.7356;6.2782;5.7635;5.6633;5.6633;5.4673;5.206;4.3951 +;-;-;-;-;-;-;-;-;- + 699 1 1.538 123507.1 0.4699999988079071 2292 5383 7674 SUDHL4_400M_050219_2,7677 SUDHL4_400M_050219_2,7677,HLSDALVEV False False HLSDAIVEV 40.785447 491.763110339642 823454.5 7674.0 ENSG00000105778|ENST00000318709|AVL9;;nc|ENSG00000105778|Q8NBF6-2|AVL9 6.295385360717773 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7679 40.79 84.0 558750.0 25 0 114910.0 17790 KQIQRDAV 8 75 479.2772675551231 956.5399821770462 2 479.2774841189384 MULTI CID FTMS 0 0 0 7678 637225.75 0.8056317986659317 -2 0.0448188781738281 1 Unmodified _KQIQRDAV_ ENSG00000186001|ENST00000425562|LRCH3;ENST00000494069.1_1_3:197566242-197575018:+|nuORF;nc|ENSG00000186001|Q96II8-2|LRCH3;nc|ENSG00000186001|Q96II8-3|LRCH3;nc|ENSG00000186001|Q96II8-4|LRCH3 2.577480529830294 0.808687252328423 6 {I|L} 1 7 10.0 0.0 0.0 1.0454 0.0 0.0 825.4451620860291 0.0 825.4451620860291 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0454 + + 2 + 1 1.538 40262.5 1.0 2293 5384 7678 SUDHL4_400M_050219_2,7679 SUDHL4_400M_050219_2,7679,KQIQRDAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7680 40.796 333.0 294020.0 25 0 8933.7 -1 0 119 910.4211977643146 0 910.4183227419852 PEAK CID FTMS 0 0 0 7678 275009.40625 0.5669140925835678 -6 0.1344070434570312 2 6 PN{I|L}NADQ[HV]{M(Oxidation (M))|F}N{I|L} 12 -1 42.605 0.0 0.0 2.3424 0.0 0.0 245.08220758810177 208.0729464166625 453.1551540047643 0.0 0.0 0.0 0.0 0 0.9731975075880328 0.0 0.0 0.0 PN{I|L}NADQ[HV]{M(Oxidation (M))|F}N{I|L} 2.3424 - 1382 + 1 1.538 68098.8 1.0 2294 5384 7678 SUDHL4_400M_050219_2,7680 SUDHL4_400M_050219_2,7680, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7681 40.804 423.0 201890.0 25 0 16103.0 + 9598 FLKYKEEV 8 89 528.2904599522032 1054.5663669712062 2 528.2902709841728 MULTI CID FTMS 0 0 0 7678 134246.828125 0.1086530022677044 -7 0.1507987976074218 3 Unmodified _FLKYKEEV_ REV__ENSG00000077274|ENST00000324068|CAPN6 28.486842064014134 0.4448922141344407 6 {[QN]|[E{I|L}]|[KN]}[RP]A{I|L}EEV 9 -1 + 44.847 0.0 0.0 4.2526 4.2526 80.222 0.0 0.0 0.0 2.086062234663899 26.06160314313349 2.086062234663899 7.447274948966928 0 0.6307196863200843 0.9208187539523752 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[RP]A{I|L}EEV;[R{I|L}][EP]A{I|L}EEV;HHT{I|L}A[HA]{[VA]|[{I|L}G]}V;HHT{I|L}A[HA][VG]{I|L} 4.2526;3.5464;2.5927;1.6228 -;-;-;- 180 1 1.538 73493.8 1.0 2295 5384 7678 SUDHL4_400M_050219_2,7681 SUDHL4_400M_050219_2,7681,FLKYKEEV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7682 40.818 800.0 58690.0 25 0 3893.0 -1 0 61 1184.1888321867175 3549.544667160353 3 1184.858447253704 MULTI CID FTMS 0 0 0 7678 79934.421875 0.8940736242755579 -2 0.0448188781738281 4 6 QTQTAYYT[QT] 10 -1 38.005 0.0 0.0 1.0707 0.0 0.0 2346.003142478249 0.0 2346.003142478249 0.0 23.540689500976967 0.0 0.0 0 0.0 0.0 0.2887254899964357 1.4049471895720984 QTQTAYYT[QT] 1.0707 - 1012 + 1 1.538 36115.2 0.3400000035762787 2296 5384 7678 SUDHL4_400M_050219_2,7682 SUDHL4_400M_050219_2,7682, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7683 40.832 800.0 96179.0 25 0 13955.0 + -1 IVDNTTMQL 9 118 525.7604085452386 1049.5062641572772 2 525.7600585818291 MULTI CID FTMS 0 0 0 7678 89986.640625 1.0 0 0.0 5 Oxidation (M) _IVDNTTM(Oxidation (M))QL_ ENSG00000067829|ENST00000217901|IDH3G;nc|ENSG00000067829|P51553-2|IDH3G 30.22481116460888 0.1466181017706357 6 [{I|L}V]D[TP]M{I|L}D{M(Oxidation (M))|F} 9 -1 + 31.238 0.0 0.0 2.9764 2.9764 80.932 0.0 0.0 0.0 7.803943707888767 2.733098926917709 2.733098926917709 11.611140571089608 0 0.0924778212679485 2.0 0.2742275032520141 0.0 [{I|L}V]D[TP]M{I|L}D{M(Oxidation (M))|F};[Q{I|L}][WP]T{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{I|L}A]G[WP]T{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[Q{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}M{I|L}D{M(Oxidation (M))|F};[NP]N[KA]T{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[HG]|PP}M[KA]T{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[{I|L}A]G{[{M(Oxidation (M))|F}H]|[RQ]}M{I|L}D{M(Oxidation (M))|F};[Q{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}[C(Carbamidomethyl (C))S]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 2.9764;1.8701;1.2913;0.76587;0.6465;0.48604;0.18707;0.087198 -;-;-;-;-;-;-;- 290 1 1.538 64620.5 0.4699999988079071 2297 5384 7678 SUDHL4_400M_050219_2,7683 SUDHL4_400M_050219_2,7683,IVDNTTMQL False False IVDNTTMQL 40.831561 525.760058581829 914682.5625 7678.0 ENSG00000067829|ENST00000217901|IDH3G;;nc|ENSG00000067829|P51553-2|IDH3G 4.723695516586304 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7685 40.838 152.0 220820.0 25 0 13144.0 + 14121 IAVEPGNQW 9 78 507.256089241994 1012.497625550788 2 507.2557250857353 MULTI CID FTMS 0 0 0 7684 60872.06640625 0.1297880385230528 6 -0.23468017578125 1 Unmodified _IAVEPGNQW_ ENSG00000171566|ENST00000499023|PLRG1;ENST00000506918.1_1_4:155463230-155466996:-|nuORF;nc|ENSG00000171566|O43660-2|PLRG1 13.50788311687929 0.4710407108020397 6 S{M(Oxidation (M))|F} 2 9 23.469 0.0 0.0 2.3179 0.0 0.0 760.3866769197317 0.0 760.3866769197317 0.0 2.96765560293629 0.0 0.0 0 0.0 0.0 0.25 0.0 S{M(Oxidation (M))|F} 2.3179 - 66 + 1 1.538 31505.9 1.0 2298 5385 7684 SUDHL4_400M_050219_2,7685 SUDHL4_400M_050219_2,7685,IAVEPGNQW False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7686 40.852 800.0 85152.0 25 0 20925.0 40526 VIVVKAPP 8 102 411.77480584812287 821.5350587630458 2 411.7744628787041 MULTI CID FTMS 0 0 0 7684 76006.7421875 0.3176709561720232 9 -0.3531074523925781 2 Unmodified _VIVVKAPP_ ENSG00000112242|ENST00000346618|E2F3;nc|ENSG00000112242|O00716-2|E2F3 2.577480529830294 0.808687252328423 6 P 1 7 8.4949 0.0 0.0 1.034 0.0 0.0 706.4711300904856 0.0 706.4711300904856 0.0 5.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 1.034 + + 12 + 1 1.538 62858.1 0.4900000095367431 2299 5385 7684 SUDHL4_400M_050219_2,7686 SUDHL4_400M_050219_2,7686,VIVVKAPP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7687 40.855 107.0 346450.0 25 0 40933.0 -1 HAIPPTLAM 9 69 483.7571500620577 965.4997471909154 2 483.7576171755791 MULTI CID FTMS 0 0 0 7684 352968.6875 0.3984400056836357 66 -2.2850112915039062 3 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 19.438996006549623 0.310492472477042 6 A{M(Oxidation (M))|F} 2 -1 20.969 0.0 0.0 2.1718 0.0 0.0 729.4167221438436 0.0 729.4167221438436 0.0 9.542425094393252 0.0 0.0 0 0.0 0.0 0.0 0.0 A{M(Oxidation (M))|F} 2.1718 + + 65 + 1 1.538 33418.7 1.0 2300 5385 7684 SUDHL4_400M_050219_2,7687 SUDHL4_400M_050219_2,7687,HAIPPTLAM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7688 40.858 177.0 439590.0 25 0 120320.0 + 37393 TLAGDVHIV 9 82 462.7612820049268 923.5080110766536 2 462.7610351443291 MULTI CID FTMS 0 0 0 7684 284602.65625 0.399470147306751 -3 0.0909309387207031 4 Unmodified _TLAGDVHIV_ ENSG00000111237|ENST00000549578|VPS29;ENST00000548259.1_1_12:110930799-110939856:-|nuORF;ENST00000548539.1_1_12:110929849-110934008:-|nuORF;nc|ENSG00000111237|Q9UBQ0-2|VPS29 16.942295170755138 0.3780752226737986 6 [{I|L}T]A 3 6 33.2 0.0 0.0 3.595 0.0 0.0 0.0 635.3150842913692 635.3150842913692 11.888793896675269 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}T]A 3.595 + + 148 + 1 1.538 66787.7 1.0 2301 5385 7684 SUDHL4_400M_050219_2,7688 SUDHL4_400M_050219_2,7688,TLAGDVHIV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7689 40.872 800.0 262500.0 25 0 24135.0 + -1 AYIYGECC 8 184 518.1988785196631 1034.3832041061262 2 518.1993896365166 MULTI CID FTMS 0 0 0 7684 164965.8125 0.6155109899059764 -2 0.0704689025878906 5 2 Carbamidomethyl (C) _AYIYGEC(Carbamidomethyl (C))C(Carbamidomethyl (C))_ REV__ENSG00000170852|ENST00000304056|KBTBD2 20.871210003555333 0.6025813472596342 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GN 5 -1 38.94 0.0 0.0 3.7646 0.0 0.0 0.0 479.1278170221313 479.1278170221313 12.838300832342052 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{M(Oxidation (M))|F}GN 3.7646 - 357 + 1 1.538 158198.5 0.6399999856948853 2302 5385 7684 SUDHL4_400M_050219_2,7689 SUDHL4_400M_050219_2,7689,AYIYGECC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7690 40.875 185.0 259970.0 25 0 27616.0 42388 VTDRSQLDI 9 77 523.7793828058282 1045.5442126784562 2 523.7803222537041 MULTI CID FTMS 0 0 0 7684 141627.6875 0.4420872756586214 -3 0.0909309387207031 6 Unmodified _VTDRSQLDI_ ENSG00000140968|ENST00000268638|IRF8 22.736283301280096 0.2418982879461534 6 {NN|[MP]|[D{I|L}]|[EV]}[QP]DKA{M(Oxidation (M))|F}{I|L} 9 7 + 52.418 0.0 0.0 5.0135 5.0135 57.233 0.0 0.0 0.0 6.210149894766701 16.478174818886373 6.210149894766701 0.0 0 0.3807196863200844 1.5228787452803376 0.3807196863200844 0.2742275032520141 {NN|[MP]|[D{I|L}]|[EV]}[QP]DKA{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QP]KDA{M(Oxidation (M))|F}{I|L};[EP]N{I|L}KDA{M(Oxidation (M))|F}{I|L};[EP]N{I|L}DKA{M(Oxidation (M))|F}{I|L};[EP]GG{I|L}KDA{M(Oxidation (M))|F}{I|L};[EP]GG{I|L}DKA{M(Oxidation (M))|F}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[QP]K[W{M(Oxidation (M))|F}]{I|L};[EP]N{I|L}[QP][HV]{I|L} 5.0135;5.0135;4.4195;4.4195;3.5388;3.5388;3.1001;1.4519 -;-;-;-;-;-;-;- 127 1 1.538 43883.9 1.0 2303 5385 7684 SUDHL4_400M_050219_2,7690 SUDHL4_400M_050219_2,7690,VTDRSQLDI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7691 40.889 800.0 171830.0 25 0 16011.0 15927 ISYFIYCMS 9 142 563.7487416009922 1125.4829302687842 2 563.7493163943291 MULTI CID FTMS 0 0 0 7684 119131.90625 0.5628769198183867 -4 0.113983154296875 7 Unmodified _ISYFIYCMS_ ENST00000025301.3_1_13:42875194-42875302:+|nuORF 20.453626601364224 0.2830276176381075 6 [DP]VAQ{I|L}Y 7 8 33.994 0.0 0.0 3.0204 0.0 0.0 0.0 336.07165032177176 336.07165032177176 11.234331141981698 0.0 0.0 0.0 0 0.805462187404089 0.0 0.5387254899964358 0.3252574989159953 [DP]VAQ{I|L}Y 3.0204 - 768 1 1.538 107884.9 0.550000011920929 2304 5385 7684 SUDHL4_400M_050219_2,7691 SUDHL4_400M_050219_2,7691,ISYFIYCMS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7693 40.896 224.0 258600.0 25 0 44915.0 15018 ILSSSILEI 9 90 487.7900707648381 973.5655885964762 2 487.7910644412041 MULTI CID FTMS 0 0 0 7692 343380.90625 0.936199780983458 -11 0.31475830078125 1 Unmodified _ILSSSILEI_ ENSG00000157426|ENST00000205214|AASDH;ENST00000503808.5_1_4:57204874-57250274:-|nuORF;nc|ENSG00000157426|Q4L235-2|AASDH;nc|ENSG00000157426|Q4L235-3|AASDH;nc|ENSG00000157426|Q4L235-4|AASDH 4.75600775471527 0.7486543447549536 6 {M(Oxidation (M))|F} 1 9 10.0 0.0 0.0 1.0272 0.0 0.0 808.5189710201075 0.0 808.5189710201075 0.0 1.020599913279625 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0272 - 8 + 1 1.538 48892.1 1.0 2305 5386 7692 SUDHL4_400M_050219_2,7693 SUDHL4_400M_050219_2,7693,ILSSSILEI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7694 40.901 260.0 259500.0 25 0 14325.0 + 42661 VTVPPGPSL 9 87 433.75272576377824 0 433.7528564333916 PEAK CID FTMS 0 0 0 7692 175202.1875 0.0396531585824761 57 -1.9048385620117188 2 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 54.773552608820026 0.0223190572393154 6 E 1 9 8.9794 0.0 0.0 1.0375 0.0 0.0 665.3747772338081 68.05130182437733 733.4260790581855 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 E 1.0375 - 53 + 1 1.538 56958.5 1.0 2306 5386 7692 SUDHL4_400M_050219_2,7694 SUDHL4_400M_050219_2,7694,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7696 40.908 240.0 294360.0 25 0 26617.0 + 31785 RSPDFASSF 9 95 507.2377865389087 1012.4610201446176 2 507.2379028201103 MULTI CID FTMS 0 0 0 7695 321003.34375 0.7407377734831331 -3 0.1153450012207031 1 Unmodified _RSPDFASSF_ ENSG00000185043|ENST00000328649|CIB1;nc|ENSG00000185043|Q99828-2|CIB1 41.95555342248728 0.0647214845423414 6 {M(Oxidation (M))|F}ASS{M(Oxidation (M))|F} 5 4 49.425 0.0 0.0 4.8816 0.0 0.0 455.2129302074543 0.0 455.2129302074543 0.0 37.2062251842808 0.0 0.0 0 1.0 0.0 0.9247425010840048 0.0 + {M(Oxidation (M))|F}ASS{M(Oxidation (M))|F} 4.8816 + + 226 1 1.538 59886.8 1.0 2307 5387 7695 SUDHL4_400M_050219_2,7696 SUDHL4_400M_050219_2,7696,RSPDFASSF True True RSPDFASSF 40.907821 507.23790282011 4976792.0 7695.0 ENSG00000185043|ENST00000328649|CIB1;;nc|ENSG00000185043|Q99828-2|CIB1 6.95590861638387 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7697 40.916 468.0 172290.0 25 0 8167.4 + -1 RQFMAETQF 9 111 587.2712310489572 1172.5279091647144 2 587.2720214724541 MULTI CID FTMS 0 0 0 7695 177275.1875 1.0 0 0.0 2 Oxidation (M) _RQFM(Oxidation (M))AETQF_ nc|ENSG00000135387|Q14444-2|CAPRIN1;ENSG00000135387|ENST00000341394|CAPRIN1 38.17557092003332 0.0854718145212029 6 [AG]{M(Oxidation (M))|F}R{M(Oxidation (M))|F}AETQ{M(Oxidation (M))|F} 10 -1 + 73.594 0.0 0.0 6.2765 6.2765 61.509 0.0 0.0 0.0 8.750612633917001 16.53212513775344 8.750612633917001 0.0 0 0.7742275032520141 1.5228787452803376 0.4247425010840047 0.0 [AG]{M(Oxidation (M))|F}R{M(Oxidation (M))|F}AETQ{M(Oxidation (M))|F};[AG]R{M(Oxidation (M))|F}{M(Oxidation (M))|F}AETQ{M(Oxidation (M))|F};[AG]{M(Oxidation (M))|F}R{M(Oxidation (M))|F}ATEQ{M(Oxidation (M))|F};[AG]R{M(Oxidation (M))|F}{M(Oxidation (M))|F}ATEQ{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}AETQ{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{M(Oxidation (M))|F}AETQ{M(Oxidation (M))|F};[AG]{M(Oxidation (M))|F}R{M(Oxidation (M))|F}AET[AG]{M(Oxidation (M))|F};[AG]R{M(Oxidation (M))|F}{M(Oxidation (M))|F}AET[AG]{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}R{M(Oxidation (M))|F}ATEQ{M(Oxidation (M))|F};{[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}ATEQ{M(Oxidation (M))|F} 6.2765;6.2765;5.9033;5.9033;5.5302;5.5302;5.4949;5.4949;5.157;5.157 -;-;-;-;+;-;-;-;-;- + 1967 1 1.538 67517.1 1.0 2308 5387 7695 SUDHL4_400M_050219_2,7697 SUDHL4_400M_050219_2,7697,RQFMAETQF False False RQFMAETQF 40.916125 587.272021472454 1027581.8125 7695.0 nc|ENSG00000135387|Q14444-2|CAPRIN1;;ENSG00000135387|ENST00000341394|CAPRIN1 6.962809085845947 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7699 40.934 800.0 113920.0 25 0 15475.0 -1 AIYPMGYCST 10 125 581.7486617791907 1161.4827706251813 2 581.7487060427666 MULTI CID FTMS 0 0 0 7698 94925.296875 0.8421718683980265 2 -0.0801658630371093 1 Carbamidomethyl (C) _AIYPMGYC(Carbamidomethyl (C))ST_ TBRG1|p.V214M|1|0.4|ENSG00000154144|chr11:124626952-124626952|G/A|missense_variant 21.74664581756881 0.480091245866545 6 [{I|L}A]Y[QP]TTCCY 10 -1 + 42.713 0.0 0.0 3.6775 3.6775 84.004 0.0 0.0 0.0 10.061668675368622 4.648867983026506 4.648867983026506 19.05822393854157 0 0.6861818737241735 1.6989700043360187 0.4247425010840047 0.0 [{I|L}A]Y[QP]TTCCY;[QP]TT{[QN]|[E{I|L}]|[KN]}[QA][C(Carbamidomethyl (C))D];[{I|L}A]Y{[HG]|PP}Q[QA][C(Carbamidomethyl (C))D];[AG]PTT{[QN]|[E{I|L}]|[KN]}[QA][C(Carbamidomethyl (C))D];[QP][PS]YP[QA][C(Carbamidomethyl (C))D];[QT]PT{[QN]|[E{I|L}]|[KN]}[QA][C(Carbamidomethyl (C))D];[AG]TPT{[QN]|[E{I|L}]|[KN]}[QA][C(Carbamidomethyl (C))D];[QP]G[W{I|L}]{[WT]|[RM]}[C(Carbamidomethyl (C))D];[Y{I|L}]A{[HG]|PP}Q[QA][C(Carbamidomethyl (C))D];[QP]Y[PS]P[QA][C(Carbamidomethyl (C))D] 3.6775;2.0366;1.5809;1.3632;0.7149;0.7041;0.69319;0.5715;0.22132;0.047255 -;-;-;-;-;-;-;-;-;- 461 + 1 1.538 74238.5 0.5099999904632568 2309 5388 7698 SUDHL4_400M_050219_2,7699 SUDHL4_400M_050219_2,7699,AIYPMGYCST False False False False variant PXD020620_cell_line SUDHL4_400M_050219_2 7700 40.938 215.0 268230.0 25 0 25742.0 + 24043 RIIDVVYNA 9 93 531.8006311487749 1061.5867093643496 2 531.8002807497978 MULTI CID FTMS 0 0 0 7698 139744.0625 0.0142602981330002 20 -0.6089935302734375 2 Unmodified _LWALLVYNA_ ENSG00000142937|ENST00000396651|RPS8 24.67388899826682 0.2172451872415813 6 [{I|L}V]{[RE]|[WV]}VVY{[QG]|[NA]} 9 4 + 33.35 0.0 0.0 3.1415 3.1415 83.811 0.0 0.0 0.0 1.8842499412940648 20.58595260500877 1.8842499412940648 33.350162448297674 0 0.9247425010840048 0.7958800173440752 0.0 0.0 [{I|L}V]{[RE]|[WV]}VVY{[QG]|[NA]} 3.1415 - 69 1 1.538 52122.5 1.0 2310 5388 7698 SUDHL4_400M_050219_2,7700 SUDHL4_400M_050219_2,7700,LWALLVYNA False False RIIDVVYNA 40.937914 531.800280749798 210347840.0 7698.0 ENSG00000142937|ENST00000396651|RPS8 6.556783358256022 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7701 40.952 800.0 111680.0 25 0 10487.0 + 14854 ILGPPGSVY 9 133 451.7523772824792 901.4902016317584 2 451.7524902224541 MULTI CID FTMS 0 0 0 7698 100436.4375 1.0 0 0.0 3 Unmodified _ILGPPGSVY_ ENSG00000170035|ENST00000410062|UBE2E3;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000495141.5_1_3:23848730-23929256:+|nuORF;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1 34.18733598223924 0.1073653526364521 6 [PG]PSG{I|L}{I|L}VY 9 5 + 52.947 0.0 0.0 5.8733 5.8733 80.36 0.0 0.0 0.0 12.465074002798032 35.95737830890137 12.465074002798032 1.989700043360188 0 0.7429928190999391 0.9208187539523752 1.424742501084005 0.0 [PG]PSG{I|L}{I|L}VY;[PG]PGS{I|L}{I|L}VY;[PG]PS{I|L}G{I|L}VY;[PG]PS{I|L}VAVY;[PG]PSVA{I|L}VY;[PG]PG{I|L}S{I|L}VY;[PG]PSV{I|L}AVY;[PG]PG{I|L}{I|L}SVY;[PG]PAVS{I|L}VY;[PG]PAV{I|L}SVY 5.8733;5.6526;5.4021;4.7986;4.7045;4.244;4.101;4.0486;3.8025;3.6072 -;-;-;-;-;-;-;-;-;- 347 1 1.538 70029.6 0.8999999761581421 2311 5388 7698 SUDHL4_400M_050219_2,7701 SUDHL4_400M_050219_2,7701,ILGPPGSVY True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7702 40.966 800.0 100890.0 25 0 5012.9 -1 AMYPDQVQL 9 116 540.7547990079962 1079.4950450827923 2 540.7559692263603 MULTI CID FTMS 0 0 0 7698 86097.921875 0.8076260535455044 -3 0.084564208984375 4 Oxidation (M) _AM(Oxidation (M))YPDQVQL_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 28.486842064014134 0.1687311288560894 6 [AG][DP]VT 6 -1 15.741 0.0 0.0 1.4581 0.0 0.0 0.0 536.218103514686 536.218103514686 1.315892290894622 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2887254899964357 0.0 [AG][DP]VT 1.4581 - 368 1 1.538 69360.7 0.4699999988079071 2312 5388 7698 SUDHL4_400M_050219_2,7702 SUDHL4_400M_050219_2,7702,AMYPDQVQL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7704 40.97 93.0 412220.0 25 0 36879.0 -1 0 53 918.4186257963686 1834.822698659537 2 918.4207031130792 MULTI CID FTMS 0 0 0 7703 390876.6875 0.1598030766482157 9 -0.2915534973144531 1 6 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 45.126 0.0 0.0 2.4594 0.0 0.0 949.4633243087866 0.0 949.4633243087866 0.0 38.13608784304506 0.0 0.0 0 1.0 0.0 0.0 0.0 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 2.4594 - 173 1 1.538 32412.6 1.0 2313 5389 7703 SUDHL4_400M_050219_2,7704 SUDHL4_400M_050219_2,7704, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7705 40.973 133.0 222720.0 25 0 20740.0 + 14483 IGGDRQGKL 9 67 472.2706357465386 942.5267185598772 2 472.2699157595634 MULTI CID FTMS 0 0 0 7703 306593.59375 0.7884932329468661 1 -0.0307388305664062 2 Unmodified _IGGDRQGKL_ REV__ENST00000456585.5_1_6:168397144-168397219:-|nuORF 7.910154910731844 0.6385446671287552 6 {I|L} 1 -1 9.7539 0.0 0.0 1.0349 0.0 0.0 811.4319442452273 0.0 811.4319442452273 0.0 6.654966095207122 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0349 + + 10 + 1 1.538 31424.2 1.0 2314 5389 7703 SUDHL4_400M_050219_2,7705 SUDHL4_400M_050219_2,7705,IGGDRQGKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7706 40.987 800.0 124890.0 25 0 12468.0 + 37563 TLIDVPNL 8 120 442.7569656738488 883.4993784144975 2 442.7564880251884 MULTI CID FTMS 0 0 0 7703 101889.328125 0.8104166397394306 -6 0.2044601440429687 3 Unmodified _TLIDVPNL_ REV__ENST00000509421.1_1_4:4896340-4896505:-|nuORF 2.577480529830294 0.808687252328423 6 D 1 -1 4.9608 0.0 0.0 0.56149 0.0 0.0 442.2752095685975 323.1708694549231 765.4460790235206 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 D 0.56149 + + 13 + 1 1.538 81876.9 0.449999988079071 2315 5389 7703 SUDHL4_400M_050219_2,7706 SUDHL4_400M_050219_2,7706,TLIDVPNL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7707 40.996 536.0 189230.0 25 0 32532.0 + 20283 LLDVARTSL 9 104 494.2950537754433 986.5755546176864 2 494.2955810427666 MULTI CID FTMS 0 0 0 7703 96033.6953125 0.4426578891172383 -2 0.06475830078125 4 Unmodified _LLDVARTSL_ ENSG00000132141|ENST00000314144|CCT6B;nc|ENSG00000132141|Q92526-2|CCT6B;nc|ENSG00000132141|Q92526-3|CCT6B 43.77239144664712 0.0547478964384323 6 {I|L}{I|L}DVA 5 4 67.563 0.0 0.0 6.8482 0.0 0.0 0.0 472.2498873346313 472.2498873346313 51.57689935101807 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.4247425010840047 0.0 + {I|L}{I|L}DVA 6.8482 + + 190 + 1 1.538 82625.7 1.0 2316 5389 7703 SUDHL4_400M_050219_2,7707 SUDHL4_400M_050219_2,7707,LLDVARTSL True True LLDVARTSL 40.996302 494.295581042767 1109535.5 7703.0 ENSG00000132141|ENST00000314144|CCT6B;;nc|ENSG00000132141|Q92526-2|CCT6B;;nc|ENSG00000132141|Q92526-3|CCT6B 3.5516703923543296 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7709 41.001 52.0 963530.0 25 0 126800.0 + 1660 ALNEQIARL 9 71 514.2984335679752 1026.5823142027502 2 514.2985717654228 MULTI CID FTMS 0 0 0 7708 1057918.75 0.8707521977532992 2 -0.1463432312011718 1 Unmodified _ALNEQIARL_ ENSG00000080986|ENST00000261597|NDC80 45.69961567697781 0.0497987121815769 6 [{I|L}A]NEQ{I|L}A[R{I|L}] 9 0 + 82.681 0.0 0.0 8.054 8.054 91.297 0.0 0.0 0.0 68.4163750790475 7.147642715192504 7.147642715192504 8.45098040014257 0 1.2302046884880935 2.0 0.0 0.8494850021680094 + + [{I|L}A]NEQ{I|L}A[R{I|L}];[{I|L}A]NEQ{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]NE[AG]{I|L}A[R{I|L}];[{I|L}A]GGEQ{I|L}A[R{I|L}];[{I|L}A]NE[AG]{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]GGEQ{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]GGE[AG]{I|L}A[R{I|L}];[{I|L}A]GGE[AG]{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[KS][DP]Q{I|L}A[R{I|L}];[KS][DP]Q{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 8.054;7.2308;7.157;7.157;6.3338;6.3338;6.2643;5.4411;2.8665;2.0433 +;-;-;-;-;-;-;-;-;- + 147 + 1 1.538 46086.0 1.0 2317 5390 7708 SUDHL4_400M_050219_2,7709 SUDHL4_400M_050219_2,7709,ALNEQIARL True True ALNEQIARL 41.001091 514.298571765423 6671188.0 7708.0 ENSG00000080986|ENST00000261597|NDC80 4.905426661173503 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7710 41.003 84.0 593010.0 25 0 95334.0 41251 VPGPGLAL 8 78 362.2223351809882 722.4301174287765 2 362.2221862673759 MULTI CID FTMS 0 0 0 7708 612497.75 0.0921611223084151 12 -0.3476104736328125 2 Unmodified _VPGPGLAL_ ENST00000324871.11_1_12:58166069-58166180:-|nuORF 0.7936320650641473 0.8195151834710337 6 C(Carbamidomethyl (C)) 1 8 6.9897 0.0 0.0 0.96753 0.0 0.0 200.19026254772024 359.1977938287719 559.3880563764922 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.96753 - 2 + 1 1.538 43100.2 1.0 2318 5390 7708 SUDHL4_400M_050219_2,7710 SUDHL4_400M_050219_2,7710,VPGPGLAL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7711 41.005 103.0 435290.0 25 0 28454.0 + 45319 YSHLPVSSL 9 77 501.7664134221495 1001.5182739110992 2 501.7665283083916 MULTI CID FTMS 0 0 0 7708 306885.96875 0.550637741313131 4 -0.1883773803710937 3 Unmodified _YSHLPVSSL_ ENSG00000113916|ENST00000406870|BCL6;nc|ENSG00000113916|P41182-2|BCL6 20.453626601364224 0.2830276176381075 6 {[TV]|[{I|L}S]}HYR 5 7 24.258 0.0 0.0 2.4221 0.0 0.0 0.0 342.1480095890866 342.1480095890866 5.585456211725198 0.0 0.0 0.0 0 0.4247425010840047 1.2218487496163564 0.0 0.0 {[TV]|[{I|L}S]}HYR 2.4221 - 128 1 1.538 38959.4 1.0 2319 5390 7708 SUDHL4_400M_050219_2,7711 SUDHL4_400M_050219_2,7711,YSHLPVSSL False True YSHLPVSSL 41.005166 501.766528308392 4552021.0 7708.0 ENSG00000113916|ENST00000406870|BCL6;;nc|ENSG00000113916|P41182-2|BCL6 0.8159979184468588 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7712 41.009 192.0 265790.0 25 0 28604.0 + 9463 FLDDNQIVT 9 96 532.7664560527897 1063.5183591723794 2 532.7666503787041 MULTI CID FTMS 0 0 0 7708 280871.53125 0.3906744407262009 -1 0.0307388305664062 4 Unmodified _FLDDNQIVT_ ENSG00000078369|ENST00000378609|GNB1;ENST00000461893.5_1_1:1720336-1724757:-|nuORF;nc|ENSG00000078369|P62873-2|GNB1 47.74868867922204 0.0453060283459952 6 {[QN]|[E{I|L}]|[KN]}DD{I|L}{M(Oxidation (M))|F}{I|L}VT 9 3 + 36.097 0.0 0.0 3.3941 3.3941 71.248 0.0 0.0 0.0 1.2540195163042256 4.766668591815424 1.2540195163042256 1.2540195163042256 0 0.8182503180159344 0.0 0.0 1.0044321917401078 {[QN]|[E{I|L}]|[KN]}DD{I|L}{M(Oxidation (M))|F}{I|L}VT;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDNQ{I|L}VT;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDGGQ{I|L}VT;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDN[AG]{I|L}VT;{[DA]|[EG]}[NG]D{I|L}{M(Oxidation (M))|F}{I|L}VT;{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}T]NQ{I|L}VT;{[QN]|[E{I|L}]|[KN]}D{M(Oxidation (M))|F}{NN|[MP]|[D{I|L}]|[EV]}{I|L}VT;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DDGG[AG]{I|L}VT;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D{M(Oxidation (M))|F}[WH]VT;{[QN]|[E{I|L}]|[KN]}[{M(Oxidation (M))|F}T]GGQ{I|L}VT 3.3941;3.2762;2.4104;2.4104;2.1205;1.5677;1.2102;1.1907;1.1121;0.70184 -;+;-;-;-;-;-;-;-;- + 310 1 1.538 45268.5 1.0 2320 5390 7708 SUDHL4_400M_050219_2,7712 SUDHL4_400M_050219_2,7712,FLDDNQIVT True True FLDDNQIVT 41.008868 532.766650378704 3742481.5 7708.0 ENST00000461893.5_1_1:1720336-1724757:-|nuORF;;ENSG00000078369|ENST00000378609|GNB1;;nc|ENSG00000078369|P62873-2|GNB1 5.840576489766439 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7713 41.016 376.0 257800.0 25 0 36683.0 + 31054 RLIEQEEYL 9 94 596.8139090401093 1191.6132651470184 2 596.8141357302666 MULTI CID FTMS 0 0 0 7708 224980.78125 0.7820341206736104 -1 0.0307388305664062 5 Unmodified _RLIEQEEYL_ ENSG00000113810|ENST00000357388|SMC4;ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4 36.506200033944 0.094635877243972 6 [R{I|L}]{I|L}EQEEY{I|L} 9 0 + 65.595 0.0 0.0 5.5047 5.5047 86.738 0.0 0.0 0.0 2.922152515121219 49.045700912310224 2.922152515121219 9.208187539523747 0 0.8807196863200843 0.0 0.0 0.7614393726401688 + + [R{I|L}]{I|L}EQEEY{I|L};[R{I|L}]{I|L}E[AG]EEY{I|L};[R{I|L}]{I|L}DAAEEY{I|L};[R{I|L}]{I|L}DV[DG]EY{I|L} 5.5047;4.732;4.4794;4.079 +;-;-;- + 241 1 1.538 76268.6 1.0 2321 5390 7708 SUDHL4_400M_050219_2,7713 SUDHL4_400M_050219_2,7713,RLIEQEEYL True True RLIEQEEYL 41.015624 596.814135730267 1558992.25 7708.0 ENST00000462668.5_1_3:160131924-160151594:+|nuORF;;nc|ENSG00000113810|Q9NTJ3-2|SMC4;;ENSG00000113810|ENST00000357388|SMC4 5.328303178151448 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7714 41.019 186.0 346570.0 25 0 36051.0 + 42557 VTPMHGLL 8 101 434.2419937529344 866.4694345726689 2 434.2411987185478 MULTI CID FTMS 0 0 0 7708 191087.15625 0.8417774161841595 -6 0.2108421325683593 6 Unmodified _VTPMHGLL_ REV__ENSG00000126226|ENST00000337344|PCID2;REV__nc|ENSG00000126226|Q5JVF3-2|PCID2;REV__nc|ENSG00000126226|Q5JVF3-3|PCID2;REV__nc|ENSG00000126226|Q5JVF3-4|PCID2 5.760428011301431 0.7893668129297577 6 {I|L} 1 -1 11.259 0.0 0.0 1.2994 0.0 0.0 735.3744771525502 0.0 735.3744771525502 0.0 -6.699740308471753 -6.699740308471753 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2994 + + 25 + 1 1.538 56834.0 1.0 2322 5390 7708 SUDHL4_400M_050219_2,7714 SUDHL4_400M_050219_2,7714,VTPMHGLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7715 41.033 800.0 162410.0 25 0 9584.3 -1 0 107 874.908188529516 1747.801824125832 2 875.4057494997978 MULTI CID FTMS 0 0 0 7708 167388.0 0.251362842991421 -8 0.2556610107421875 7 6 [NP]{I|L}N[C(Carbamidomethyl (C))K][HN]AN{I|L}NPDQ 15 -1 + 66.404 0.0 0.0 3.7993 3.7993 75.632 0.0 0.0 0.0 1.5167384268260946 37.341824846900806 1.5167384268260946 3.6000785562332 0 1.1237125054200234 0.958607314841775 0.0 1.1989700043360187 [NP]{I|L}N[C(Carbamidomethyl (C))K][HN]AN{I|L}NPDQ;{[QV]|[N{I|L}]|[RA]|[KV]}PN[C(Carbamidomethyl (C))K][HN]AN{I|L}NPDQ;{[QV]|[N{I|L}]|[RA]|[KV]}[HV][RD]QDAN{I|L}NPDQ;[NP]{I|L}N{M(Oxidation (M))|F}{[TV]|[{I|L}S]}[YV]D{I|L}NPDQ;{[QV]|[N{I|L}]|[RA]|[KV]}PN{M(Oxidation (M))|F}{[TV]|[{I|L}S]}[YV]D{I|L}NPDQ;[KA][YT][RD]QDAN{I|L}NPDQ;[KA][YT][RD]QWN{I|L}NPDQ;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[RE]|[WV]}{M(Oxidation (M))|F}[HN]AN{I|L}NPDQ 3.7993;3.5933;3.3981;3.384;3.1781;2.7998;2.417;2.0579 -;-;-;-;-;-;-;- 995 1 1.538 91275.3 0.6100000143051147 2323 5390 7708 SUDHL4_400M_050219_2,7715 SUDHL4_400M_050219_2,7715, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7716 41.047 800.0 167360.0 25 0 22311.0 + 31030 RLGPVPPGL 9 116 453.2821012985476 904.5496496638953 2 453.2825805544853 MULTI CID FTMS 0 0 0 7708 114042.921875 0.4791095670777629 -5 0.1647300720214843 8 Unmodified _RLGPVPPGL_ ENSG00000146833|ENST00000349062|TRIM4;nc|ENSG00000146833|Q9C037-3|TRIM4;nc|ENSG00000146833|Q9C037|TRIM4 26.88365393820708 0.1891292719743517 6 {[VA]|[{I|L}G]}RPVPPG{I|L} 9 2 + 39.69 0.0 0.0 4.3878 4.3878 84.341 0.0 0.0 0.0 5.396231685238384 29.856967221445984 5.396231685238384 10.511525224473807 0 1.4645069810232298 1.154901959985743 0.0 0.0 {[VA]|[{I|L}G]}RPVPPG{I|L};{[VA]|[{I|L}G]}V[RP]PPG{I|L};[PG][R{I|L}]VPPG{I|L};VVA[RP]PPG{I|L};[{I|L}P]{[NV]|[RG]}VPPG{I|L};[VP]{[QV]|[N{I|L}]|[RA]|[KV]}VPPG{I|L} 4.3878;3.2257;2.6311;2.4681;2.2525;2.0726 -;-;-;-;-;- 202 1 1.538 105440.1 0.4799999892711639 2324 5390 7708 SUDHL4_400M_050219_2,7716 SUDHL4_400M_050219_2,7716,RLGPVPPGL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7717 41.057 573.0 177130.0 25 0 8057.9 + -1 RMFDGKFVVA 10 121 593.3077521657964 1184.600951398393 2 593.3075439333916 MULTI CID FTMS 0 0 0 7708 103561.5234375 0.5421440839195915 -1 0.0307388305664062 9 Oxidation (M) _RM(Oxidation (M))FDGKFVVA_ nc|ENSG00000152332|Q8TAS1-3|UHMK1;ENSG00000152332|ENST00000489294|UHMK1 18.373094154950223 0.5392593366289069 6 [{M(Oxidation (M))|F}V]E[C(Carbamidomethyl (C))S]K{M(Oxidation (M))|F}V{[VA]|[{I|L}G]} 10 -1 + 19.71 0.0 0.0 1.6639 1.6639 78.903 0.0 0.0 0.0 1.5617342076037453 8.027646714607355 1.5617342076037453 9.771212547196626 0 0.4247425010840047 0.0 0.8807196863200843 0.0 [{M(Oxidation (M))|F}V]E[C(Carbamidomethyl (C))S]K{M(Oxidation (M))|F}V{[VA]|[{I|L}G]};[{M(Oxidation (M))|F}V]E[C(Carbamidomethyl (C))S]KV{M(Oxidation (M))|F}{[VA]|[{I|L}G]} 1.6639;0.83901 -;- 132 1 1.538 78138.0 1.0 2325 5390 7708 SUDHL4_400M_050219_2,7717 SUDHL4_400M_050219_2,7717,RMFDGKFVVA False False RMFDGKFVVA 41.056916 593.307543933392 947787.625 7708.0 nc|ENSG00000152332|Q8TAS1-3|UHMK1;;ENSG00000152332|ENST00000489294|UHMK1 6.105579058329265 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7718 41.066 531.0 341050.0 25 0 45426.0 + 9707 FLTDREVRL 9 150 383.5522854975673 1147.635027092902 3 383.5518676638603 MULTI CID FTMS 0 0 0 7708 95114.609375 0.3860856601267004 -1 0.0307388305664062 10 Unmodified _FLTDREVRL_ ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2 29.43715596616401 0.1566398223704148 6 {M(Oxidation (M))|F}{I|L}TDRE{I|L}VR 9 2 + 58.54 0.0 0.0 5.1009 5.1009 76.981 0.0 0.0 0.0 47.70226520008213 6.310291276247369 6.310291276247369 1.668950068207451 0 0.3054621874040891 0.0 0.4247425010840047 0.6989700043360187 {M(Oxidation (M))|F}{I|L}TDRE{I|L}VR;{M(Oxidation (M))|F}{I|L}{I|L}C{I|L}[DG]{I|L}VR;{M(Oxidation (M))|F}{I|L}TD{I|L}{[RE]|[WV]}VR;{M(Oxidation (M))|F}{I|L}{I|L}C[VG]E{I|L}VR;{M(Oxidation (M))|F}{I|L}TD{I|L}[R{I|L}]DR;[{I|L}T]S[{I|L}T]RC{I|L}{I|L}E;{M(Oxidation (M))|F}{I|L}TDR{I|L}{I|L}DR;{M(Oxidation (M))|F}{I|L}TDRE[RV]{I|L};{M(Oxidation (M))|F}{I|L}{I|L}C{I|L}[DG][RV]{I|L};{M(Oxidation (M))|F}{I|L}{I|L}C[VG]{I|L}{I|L}DR 5.1009;4.9555;4.6697;4.5397;4.1005;4.0721;3.6848;3.4351;3.2896;3.1236 -;-;-;-;-;-;-;+;-;- + 666 + 1 1.538 145561.1 1.0 2326 5390 7708 SUDHL4_400M_050219_2,7718 SUDHL4_400M_050219_2,7718,FLTDREVRL False True FLTDREVRL 41.066249 383.55186766386 1182273.875 7708.0 ENSG00000134318|ENST00000315872|ROCK2;;ENSG00000067900|ENST00000399799|ROCK1 2.104208489259084 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7720 41.071 49.0 1302700.0 25 0 97952.0 + 31170 RLPEAIEEV 9 69 528.2904599522032 1054.5663669712062 2 528.2905151247978 MULTI CID FTMS 0 0 0 7719 1235555.625 1.0 0 0.0 1 Unmodified _RLPEAIEEV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 23.78978130925829 0.2284941198415988 6 A{I|L}EEV 5 4 45.019 0.0 0.0 4.2689 0.0 0.0 495.2810833708508 0.0 495.2810833708508 0.0 19.05910029718697 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 + A{I|L}EEV 4.2689 + + 70 1 1.538 54213.7 1.0 2327 5391 7719 SUDHL4_400M_050219_2,7720 SUDHL4_400M_050219_2,7720,RLPEAIEEV False True RLPEAIEEV 41.071439 528.290515124798 39391890.0 7719.0 ENST00000460882.5_1_9:37422710-37436776:+|nuORF;;ENST00000493368.5_1_9:37422710-37428742:+|nuORF;;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;;ENSG00000137106|ENST00000318158|GRHPR 5.758070309956868 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7721 41.076 221.0 388870.0 25 0 21061.0 -1 0 112 925.4275450404784 1848.8405371477563 2 925.4286376833916 MULTI CID FTMS 0 0 0 7719 304233.4375 0.2895723186154215 4 -0.1380538940429687 2 6 RQAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 10 -1 41.419 0.0 0.0 2.2403 0.0 0.0 665.3217373781856 0.0 665.3217373781856 0.0 13.438878090061555 0.0 0.0 0 1.079689690656103 0.0 0.0 0.4247425010840047 RQAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.2403 - 3105 1 1.538 59727.4 1.0 2328 5391 7719 SUDHL4_400M_050219_2,7721 SUDHL4_400M_050219_2,7721, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7722 41.077 72.0 748060.0 25 0 141890.0 11587 GKPMELIIG 9 78 479.2772675551231 956.5399821770462 2 479.2775451540947 MULTI CID FTMS 0 0 0 7719 744604.3125 0.9413883722900156 5 -0.1421241760253906 3 Unmodified _GKPMELIIG_ ENSG00000110711|ENST00000279146|AIP 2.059750862983233 0.8427793054688888 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.538 47902.0 1.0 2329 5391 7719 SUDHL4_400M_050219_2,7722 SUDHL4_400M_050219_2,7722,GKPMELIIG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7723 41.079 89.0 487110.0 25 0 70896.0 + 13515 HMPITLIS 8 81 456.2565762900499 910.4985996468998 2 456.2564880251884 MULTI CID FTMS 0 0 0 7719 525918.4375 0.7582339168386835 5 -0.1421241760253906 4 Unmodified _HMPITLIS_ REV__ENSG00000197181|ENST00000356766|PIWIL2;REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2 2.889219685676258 0.8067950007271085 6 E 1 -1 6.2591 0.0 0.0 0.68743 0.0 0.0 455.2621932521717 323.17194544010005 778.4341386922717 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 E 0.68743 - 3 + 1 1.538 39020.4 1.0 2330 5391 7719 SUDHL4_400M_050219_2,7723 SUDHL4_400M_050219_2,7723,HMPITLIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7724 41.083 186.0 434140.0 25 0 46072.0 + 35970 SVQGIIIYR 9 97 524.811820211365 1047.60908748953 2 524.8115112185478 MULTI CID FTMS 0 0 0 7719 296853.21875 1.0 0 0.0 5 Unmodified _SVQGIIIYR_ ENSG00000005022|ENST00000317881|SLC25A5;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000169100|ENST00000381401|SLC25A6;ENST00000406156.2_1_6:121975405-121975696:+|nuORF;ENST00000435239.1_1_7:32511604-32512018:+|nuORF 60.07390631473393 0.0260411565414776 6 [VS]QG{I|L}{I|L}{I|L}YR 9 0 + 93.601 0.0 0.0 8.9347 8.9347 93.977 0.0 0.0 0.0 77.30208825864347 18.60340107466033 18.60340107466033 9.208187539523747 0 1.1989700043360187 2.0 0.0 1.301727099955855 + + [VS]QG{I|L}{I|L}{I|L}YR;[VS][AG]G{I|L}{I|L}{I|L}YR;[VS]QG{I|L}{I|L}YR{I|L};{[TV]|[{I|L}S]}H{I|L}{I|L}{I|L}GQ[PA];[VS][AG]G{I|L}{I|L}YR{I|L};{[TV]|[{I|L}S]}H{I|L}{I|L}{I|L}G[AG][PA] 8.9347;8.0557;6.5784;5.9001;5.6994;4.6618 +;-;-;-;-;- + 216 + 1 1.538 65463.6 1.0 2331 5391 7719 SUDHL4_400M_050219_2,7724 SUDHL4_400M_050219_2,7724,SVQGIIIYR True True SVQGIIIYR 41.082872 524.811511218548 1697457.0 7719.0 ENSG00000169100|ENST00000381401|SLC25A6;;ENST00000435239.1_1_7:32511604-32512018:+|nuORF;;ENSG00000005022|ENST00000317881|SLC25A5;;ENSG00000151729|ENST00000281456|SLC25A4;;ENST00000406156.2_1_6:121975405-121975696:+|nuORF 8.653087139129639 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7725 41.097 800.0 145010.0 25 0 13326.0 -1 0 92 599.6358136523518 1795.8856115572553 3 599.6354858279228 MULTI CID FTMS 0 0 0 7719 116112.5078125 0.4856540513735058 -2 0.1006889343261718 6 6 [H{I|L}][NP][VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K 15 -1 + 93.254 0.0 0.0 5.1927 5.1927 77.451 0.0 0.0 0.0 15.01924031492912 71.03585325153396 15.01924031492912 1.7474250108400469 0 1.2614393726401687 1.6989700043360187 0.0 0.3807196863200844 [H{I|L}][NP][VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[H{I|L}][NP]{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP]{I|L}H[VP]{M(Oxidation (M))|F}YDG{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP]{I|L}H{I|L}TEYDG{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H[VP]{M(Oxidation (M))|F}YDG[H{I|L}]{M(Oxidation (M))|F}{I|L}K;[NP]{I|L}H{I|L}TEYDG[H{I|L}]{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}H{I|L}[C(Carbamidomethyl (C))Q][YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H{I|L}[C(Carbamidomethyl (C))K][YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q;[NP]{I|L}H{I|L}TEY[YQ]M{M(Oxidation (M))|F}{I|L}K;[NP]{I|L}H{I|L}[C(Carbamidomethyl (C))Q][YN]{M(Oxidation (M))|F}{I|L}H{I|L}K 5.1927;5.0954;4.2633;4.166;3.5672;3.4699;3.1369;3.1369;2.9298;2.7643 -;-;-;-;-;-;-;-;-;- 592 1 1.538 94848.2 0.5600000023841858 2332 5391 7719 SUDHL4_400M_050219_2,7725 SUDHL4_400M_050219_2,7725, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7726 41.111 800.0 145590.0 25 0 24121.0 -1 0 94 574.9914607181124 3443.905105509074 6 575.3265869021416 MULTI CID FTMS 0 0 0 7719 97220.3046875 0.9323210474553864 -1 0.0699501037597656 7 6 Y 1 -1 12.474 0.0 0.0 0.36221 0.0 0.0 3262.8312662530184 0.0 3262.8312662530184 0.0 1.6367946719316515 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.36221 - 49 + 1 1.538 96341.5 0.5199999809265137 2333 5391 7719 SUDHL4_400M_050219_2,7726 SUDHL4_400M_050219_2,7726, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7727 41.124 800.0 75092.0 25 0 3275.8 + -1 LLVFMDVMDA 10 101 585.2848555019939 0 585.3088867068291 PEAK CID FTMS 0 0 0 7719 11000.8193359375 0.5965888189660441 -3 0.150115966796875 8 Oxidation (M) _LLVFM(Oxidation (M))DVMDA_ REV__ENSG00000151611|ENST00000649156|MMAA 6.2057823575117 0.3961065659209838 6 YD 2 -1 10.573 0.0 0.0 0.90481 0.0 0.0 204.06032218512547 683.3845919244749 887.4449141096004 0.0 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 YD 0.90481 - 90 + 1 1.538 50304.5 0.5 2334 5391 7719 SUDHL4_400M_050219_2,7727 SUDHL4_400M_050219_2,7727,LLVFMDVMDA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7728 41.132 442.0 116030.0 25 0 8950.8 + 1431 ALDSGAFQSV 10 95 497.7467942241311 993.4790355150622 2 497.7455627322197 MULTI CID FTMS 0 0 0 7719 85732.5 1.0 0 0.0 9 Unmodified _ALDSGAFQSV_ ENSG00000111726|ENST00000229329|CMAS;nc|ENSG00000111726|Q8NFW8-2|CMAS 37.97399986684836 0.1789611706409123 6 [{I|L}A]D 3 7 20.942 0.0 0.0 2.108 0.0 0.0 0.0 691.308569777034 691.308569777034 1.8875686288412616 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + [{I|L}A]D 2.108 + + 106 1 1.538 45145.3 1.0 2335 5391 7719 SUDHL4_400M_050219_2,7728 SUDHL4_400M_050219_2,7728,ALDSGAFQSV False True ALDSGAFQSV 41.132218 497.74556273222 444053.625 7719.0 ENSG00000111726|ENST00000229329|CMAS;;nc|ENSG00000111726|Q8NFW8-2|CMAS 4.609104633331299 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7729 41.134 95.0 1074600.0 25 0 82681.0 -1 0 92 910.9151338918268 1819.815714850453 2 910.9185668826104 MULTI CID FTMS 0 0 0 7719 666894.9375 0.5872819017457768 -2 0.1006889343261718 10 6 SGRQEEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 13 -1 80.687 0.0 0.0 4.4338 0.0 0.0 434.217577049025 0.0 434.217577049025 0.0 37.07680682630685 0.0 0.0 0 1.7302046884880935 0.0 0.3494850021680094 1.174742501084005 SGRQEEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.4338 - 2452 1 1.538 71175.1 1.0 2336 5391 7719 SUDHL4_400M_050219_2,7729 SUDHL4_400M_050219_2,7729, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7730 41.139 153.0 403090.0 25 0 27979.0 -1 0 74 924.4440721395364 0 924.4438354372978 PEAK CID FTMS 0 0 0 7719 384635.6875 1.0 0 0.0 11 6 VATAS 5 -1 24.447 0.0 0.0 1.3237 0.0 0.0 1221.530767962682 193.0983828180297 1414.6291507807116 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4436726795685342 0.0 VATAS 1.3237 - 580 + 1 1.538 48330.4 1.0 2337 5391 7719 SUDHL4_400M_050219_2,7730 SUDHL4_400M_050219_2,7730, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7731 41.143 215.0 208450.0 25 0 37236.0 + + 23527 TLTEEGVIKV 10 70 544.8140205748273 1087.6134882164545 2 545.3160278201103 MULTI CID FTMS 0 0 0 7719 204655.46875 1.0 0 0.0 12 Unmodified _LTLCLHYLL_ nc|ENSG00000107937|Q9BZE4-3|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;ENSG00000107937|ENST00000360803|GTPBP4 8.593279151180031 0.6146971463335029 6 [{I|L}T]T{NN|[MP]|[D{I|L}]|[EV]}W{I|L}{[QV]|[N{I|L}]|[RA]|[KV]} 9 -1 + 41.36 0.0 0.0 3.8029 3.8029 81.137 0.0 0.0 0.0 35.8759123398972 5.642492736872597 5.642492736872597 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.0 [{I|L}T]T{NN|[MP]|[D{I|L}]|[EV]}W{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}T]T{NN|[MP]|[D{I|L}]|[EV]}{[DA]|[EG]}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]};[K{I|L}][R{M(Oxidation (M))|F}]{NN|[MP]|[D{I|L}]|[EV]}T[VP] 3.8029;2.9562;0.35484 -;-;- 39 + 1 1.538 39217.0 1.0 2338 5391 7719 SUDHL4_400M_050219_2,7731 SUDHL4_400M_050219_2,7731,LTLCLHYLL False False TLTEEGVIKV 41.142634 545.31602782011 1046945.125 7719.0 nc|ENSG00000107937|Q9BZE4-3|GTPBP4;;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;;ENSG00000107937|ENST00000360803|GTPBP4 2.5186527172724404 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7733 41.159 800.0 146050.0 25 0 24459.0 + 37394 TLAGDVHIV 9 116 462.7612820049268 923.5080110766536 2 462.7613708376884 MULTI CID FTMS 0 0 0 7732 80429.2578125 0.1128910316209743 4 -0.0657310485839843 1 Unmodified _TLAGDVHIV_ ENSG00000111237|ENST00000549578|VPS29;ENST00000548259.1_1_12:110930799-110939856:-|nuORF;ENST00000548539.1_1_12:110929849-110934008:-|nuORF;nc|ENSG00000111237|Q9UBQ0-2|VPS29 21.74664581756881 0.2544899275067181 6 [{I|L}T]A 3 6 36.254 0.0 0.0 3.9257 0.0 0.0 0.0 635.3163546197874 635.3163546197874 13.57840941039747 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.0 0.0 + [{I|L}T]A 3.9257 + + 273 + 1 1.538 94898.4 0.8399999737739563 2339 5392 7732 SUDHL4_400M_050219_2,7733 SUDHL4_400M_050219_2,7733,TLAGDVHIV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7734 41.163 198.0 271280.0 25 0 32410.0 -1 HAIPPTLAM 9 85 483.7571500620577 965.4997471909154 2 483.7572509646416 MULTI CID FTMS 0 0 0 7732 251023.953125 0.2833622042177713 73 -2.390880584716797 2 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 32.116972079565 0.1225432171549407 6 TAH{I|L}A{M(Oxidation (M))|F} 6 -1 34.931 0.0 0.0 3.6179 0.0 0.0 307.1898670880875 0.0 307.1898670880875 0.0 17.941386729136696 0.0 0.0 0 0.8935078169319297 0.0 0.8807196863200843 0.0 TAH{I|L}A{M(Oxidation (M))|F} 3.6179 - 185 1 1.538 46889.9 1.0 2340 5392 7732 SUDHL4_400M_050219_2,7734 SUDHL4_400M_050219_2,7734,HAIPPTLAM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7735 41.171 448.0 217630.0 25 0 36289.0 + -1 IEVDPDTKEML 11 99 653.3149505950366 1304.6153482568732 2 653.3162109255791 MULTI CID FTMS 0 0 0 7732 179714.75 0.7485151710781149 -5 0.2418403625488281 3 Oxidation (M) _IEVDPDTKEM(Oxidation (M))L_ ENST00000561068.5_3_15:83205554-83208094:-|nuORF;ENSG00000182774|ENST00000647841|RPS17;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;ENST00000396783.2_1_6:29457050-29457287:-|nuORF 42.83518252547288 0.1687213420692654 6 {I|L}EVDPDT 7 -1 83.052 0.0 0.0 6.366 0.0 0.0 0.0 532.2442173616779 532.2442173616779 45.84357025103624 0.0 0.0 0.0 0 1.424742501084005 1.6989700043360187 0.7614393726401688 0.0 {I|L}EVDPDT 6.366 + + 2486 + 1 1.538 79284.8 1.0 2341 5392 7732 SUDHL4_400M_050219_2,7735 SUDHL4_400M_050219_2,7735,IEVDPDTKEML False False IEVDPDTKEML 41.170746 653.316210925579 1085309.5 7732.0 ENST00000561068.5_3_15:83205554-83208094:-|nuORF;;ENSG00000182774|ENST00000647841|RPS17;;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;;ENST00000396783.2_1_6:29457050-29457287:-|nuORF 6.561774730682373 2.0 True 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7736 41.174 153.0 234970.0 25 0 27225.0 23590 LTPAFPRSL 9 76 501.2909857587062 1000.5674185842124 2 501.2902404665947 MULTI CID FTMS 0 0 0 7732 141719.0625 0.4070487584995363 12 -0.2682266235351562 4 Unmodified _LTPAFPRSL_ ENSG00000120733|ENST00000314358|KDM3B;nc|ENSG00000120733|Q7LBC6-2|KDM3B 10.823927491677226 0.5436922275383211 6 {I|L} 1 8 12.764 0.0 0.0 1.2757 0.0 0.0 869.4727358222968 0.0 869.4727358222968 0.0 8.784809756568528 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2757 + + 13 + 1 1.538 34082.3 1.0 2342 5392 7732 SUDHL4_400M_050219_2,7736 SUDHL4_400M_050219_2,7736,LTPAFPRSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7738 41.18 126.0 294470.0 25 0 42046.0 38513 TSLSVRVGR 9 71 487.7900707648381 973.5655885964762 2 487.7908203005791 MULTI CID FTMS 0 0 0 7737 334015.59375 0.9106660272081152 -4 0.2082176208496093 1 Unmodified _TSLSVRVGR_ ENST00000395290.6_1_11:47493253-47493394:-|nuORF 2.059750862983233 0.8427793054688888 6 A 1 9 10.713 0.0 0.0 1.1004 0.0 0.0 884.5175214351466 0.0 884.5175214351466 0.0 2.7545373444029053 0.0 0.0 0 0.0 0.0 0.0 0.0 A 1.1004 - 19 + 1 1.538 34968.5 1.0 2343 5393 7737 SUDHL4_400M_050219_2,7738 SUDHL4_400M_050219_2,7738,TSLSVRVGR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7739 41.185 237.0 239590.0 25 0 19991.0 + -1 SQWDSPMRV 9 68 561.2555558071194 1120.4965586810388 2 561.2563354372978 MULTI CID FTMS 0 0 0 7737 194508.25 0.5438038866349787 -4 0.2082176208496093 2 Oxidation (M) _SQWDSPM(Oxidation (M))RV_ ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B 23.78978130925829 0.2284941198415988 6 {[QS]|[NT]}WDS 5 -1 29.961 0.0 0.0 2.6739 0.0 0.0 0.0 514.2446325025427 514.2446325025427 7.742275032520141 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {[QS]|[NT]}WDS 2.6739 + + 54 + 1 1.538 52087.0 1.0 2344 5393 7737 SUDHL4_400M_050219_2,7739 SUDHL4_400M_050219_2,7739,SQWDSPMRV False False SQWDSPMRV 41.184677 561.256335437298 1406765.125 7737.0 ENSG00000132549|ENST00000357162|VPS13B;;nc|ENSG00000132549|Q7Z7G8|VPS13B;;nc|ENSG00000132549|Q7Z7G8-6|VPS13B 4.553562641143799 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7741 41.196 486.0 257480.0 25 0 20246.0 -1 AQCSSPHSGL 10 169 522.2332212306726 1042.451889528145 2 522.2330200076103 MULTI CID FTMS 0 0 0 7740 168104.0 0.7153427338628506 -3 0.1184272766113281 1 Carbamidomethyl (C) _AQC(Carbamidomethyl (C))SSPHSGL_ ENST00000545576.1_1_12:8757676-8765375:-|nuORF 13.042465956692816 0.6287021003332052 6 SG{I|L} 3 -1 26.969 0.0 0.0 2.5871 0.0 0.0 767.3038010045108 0.0 767.3038010045108 0.0 3.9229383163556895 0.0 0.0 0 0.7302046884880937 0.0 0.25 0.0 SG{I|L} 2.5871 + + 708 + 1 1.538 98700.6 1.0 2345 5394 7740 SUDHL4_400M_050219_2,7741 SUDHL4_400M_050219_2,7741,AQCSSPHSGL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7742 41.204 481.0 150080.0 25 0 9611.2 + 25836 NLDNPIQTV 9 120 507.266961886305 0 507.2674743533134 PEAK CID FTMS 0 0 0 7740 99644.7109375 0.8566665659181049 1 -0.0196266174316406 2 Unmodified _NLDNPIQTV_ ENSG00000103226|ENST00000399336|NOMO3;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000185164|ENST00000622306|NOMO2;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;nc|ENSG00000185164|Q5JPE7-3|NOMO2;nc|ENSG00000185164|Q5JPE7|NOMO2 29.081581746732265 0.1187435359889091 6 SSAHHEN 7 9 23.153 0.0 0.0 2.2867 0.0 0.0 165.13472377485647 82.06677423648671 247.2014980113432 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.535666875892183 SSAHHEN 2.2867 - 252 + 1 1.538 57389.2 1.0 2346 5394 7740 SUDHL4_400M_050219_2,7742 SUDHL4_400M_050219_2,7742,NLDNPIQTV True True NLDNPIQTV 41.204303 507.267474353313 1061973.625 7740.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;ENST00000572932.1_1_16:16374097-16382502:+|nuORF;;nc|ENSG00000185164|Q5JPE7|NOMO2 5.348713159561157 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7745 41.225 800.0 52691.0 25 0 16911.0 11996 GPGLGVIK 8 55 740.463561697617 739.456285231017 1 740.4652587771416 MULTI CID FTMS 0 0 0 7744 58539.3046875 0.026402707724778 19 -0.5762596130371094 1 Unmodified _GPGLGVIK_ ENST00000373998.5_1_X:70474787-70474928:-|nuORF 6.354104778181461 0.7857632046190106 6 {[QV]|[N{I|L}]|[RA]|[KV]}P 3 7 2.9318 0.0 0.0 0.39648 0.0 0.0 0.0 412.2531656843951 412.2531656843951 2.8431811792050627 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}P 0.39648 - 12 1 1.538 39403.5 0.4900000095367431 2347 5396 7744 SUDHL4_400M_050219_2,7745 SUDHL4_400M_050219_2,7745,GPGLGVIK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7747 41.23 154.0 251510.0 25 0 31735.0 + 1209 AIEAKKHF 8 73 472.2706357465386 942.5267185598772 2 472.2704955935478 MULTI CID FTMS 0 0 0 7746 302951.0 0.7791252599011165 9 -0.2628555297851562 1 Unmodified _AIEAKKHF_ REV__ENST00000434764.1_1_2:105486345-105489033:-|nuORF 9.347437153973935 0.7675937258251505 6 [{I|L}A]{[CP]|[EA]}S 5 -1 21.299 0.0 0.0 2.2598 0.0 0.0 0.0 468.2721768941148 468.2721768941148 10.853481135844874 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.0 0.0 [{I|L}A]{[CP]|[EA]}S 2.2598 - 57 1 1.538 36696.5 1.0 2348 5397 7746 SUDHL4_400M_050219_2,7747 SUDHL4_400M_050219_2,7747,AIEAKKHF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7748 41.244 800.0 136880.0 25 0 10989.0 32039 RVKPGRGD 8 138 442.7569656738488 883.4993784144975 2 442.7567016482353 MULTI CID FTMS 0 0 0 7746 88918.96875 0.7072518112501827 2 -0.0648651123046875 2 Unmodified _RVKPGRGD_ ENSG00000065457|ENST00000564657|ADAT1;nc|ENSG00000065457|Q9BUB4-2|ADAT1 2.302733041254933 0.8103549651115762 6 V 1 7 10.0 0.0 0.0 1.1319 0.0 0.0 766.4200307355898 0.0 766.4200307355898 0.0 0.9092179397238632 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.1319 + + 58 + 1 1.538 90523.4 0.959999978542328 2349 5397 7746 SUDHL4_400M_050219_2,7748 SUDHL4_400M_050219_2,7748,RVKPGRGD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7749 41.246 75.0 687380.0 25 0 98052.0 + 14057 RLPNSTIYV 9 75 532.2923937179164 1062.5702345026327 2 532.2923461794853 MULTI CID FTMS 0 0 0 7746 345539.75 0.3157305620465393 -6 0.1585235595703125 3 Unmodified _IALNKNEYV_ nc|ENSG00000132182|Q8TEM1-2|NUP210;ENSG00000132182|ENST00000254508|NUP210 25.399314129420983 0.2080152500878129 6 {I|L}YV 3 6 31.198 0.0 0.0 2.9361 0.0 0.0 669.3444786771919 0.0 669.3444786771919 0.0 15.970450428457202 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}YV 2.9361 - 44 1 1.538 46164.0 1.0 2350 5397 7746 SUDHL4_400M_050219_2,7749 SUDHL4_400M_050219_2,7749,IALNKNEYV False False RLPNSTIYV 41.245923 532.292346179485 0.0 7746.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENSG00000132182|ENST00000254508|NUP210 3.7569403648376474 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7750 41.257 641.0 262300.0 25 0 36614.0 + 15783 ISEENFRVM 9 162 570.7708052530172 1139.5270575728343 2 570.7709838747978 MULTI CID FTMS 0 0 0 7746 140833.171875 0.138158035110902 -8 0.2592124938964844 4 Oxidation (M) _ISEENFRVM(Oxidation (M))_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 107.1870275148908 0.0071859432680538 6 {I|L}SEEN{M(Oxidation (M))|F}RV{M(Oxidation (M))|F} 9 0 + 101.88 0.0 0.0 8.9406 8.9406 93.989 0.0 0.0 0.0 71.28709725010873 12.09614293199344 12.09614293199344 9.208187539523747 0 1.1643943297944483 2.0 1.079689690656103 0.2887254899964357 + + {I|L}SEEN{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};{I|L}SEEGG{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};{I|L}S{M(Oxidation (M))|F}WWRV{M(Oxidation (M))|F};{I|L}SEE[Q{I|L}]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}Y;{[TV]|[{I|L}S]}R{M(Oxidation (M))|F}NEEV{M(Oxidation (M))|F};{[TV]|[{I|L}S]}R{M(Oxidation (M))|F}GGEEV{M(Oxidation (M))|F};{I|L}SE[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][{I|L}V]C(Carbamidomethyl (C)){I|L};{[TV]|[{I|L}S]}R{M(Oxidation (M))|F}NE{[{M(Oxidation (M))|F}D]|MM}{I|L};{I|L}SE[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][{I|L}V]CG{I|L};{I|L}S{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))E]|[WC]}[{I|L}V]C(Carbamidomethyl (C)){I|L} 8.9406;8.1325;5.6496;5.5259;5.4188;4.6107;4.3715;4.3207;3.703;3.6329 +;-;-;-;-;-;-;-;-;- + 1796 + 1 1.538 123617.9 1.0 2351 5397 7746 SUDHL4_400M_050219_2,7750 SUDHL4_400M_050219_2,7750,ISEENFRVM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7752 41.265 205.0 319800.0 25 0 28819.0 + 28097 PPLAALAA 8 111 362.2223351809882 722.4301174287765 2 362.2222473025322 MULTI CID FTMS 0 0 0 7751 172751.5625 0.0259935287607706 20 -0.6295547485351562 1 Unmodified _PPLAALAA_ REV__ENSG00000150281|ENST00000279804|CTF1;REV__nc|ENSG00000150281|Q16619-2|CTF1 0.7936320650641473 0.8195151834710337 6 {M(Oxidation (M))|F} 1 -1 10.596 0.0 0.0 1.4667 0.0 0.0 557.3504340565094 0.0 557.3504340565094 0.0 4.398044455712106 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.4667 - 6 + 1 1.538 56899.8 1.0 2352 5398 7751 SUDHL4_400M_050219_2,7752 SUDHL4_400M_050219_2,7752,PPLAALAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7753 41.273 429.0 129130.0 25 0 9029.8 -1 0 74 918.4186257963686 1834.822698659537 2 918.9148437380792 MULTI CID FTMS 0 0 0 7751 112696.03125 0.0438336806214955 21 -0.6741218566894531 2 6 [NP]{I|L}KWD{M(Oxidation (M))|F}[WY]N[NP]{[QN]|[E{I|L}]|[KN]} 14 -1 + 39.746 0.0 0.0 2.1662 2.1662 82.595 0.0 0.0 0.0 13.419886033428874 23.82596115583656 13.419886033428874 39.74619541313484 0 0.4247425010840047 0.8860566476931632 0.0 0.6549471895720984 [NP]{I|L}KWD{M(Oxidation (M))|F}[WY]N[NP]{[QN]|[E{I|L}]|[KN]} 2.1662 - 525 1 1.538 42044.6 1.0 2353 5398 7751 SUDHL4_400M_050219_2,7753 SUDHL4_400M_050219_2,7753, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7754 41.286 800.0 150650.0 25 0 8989.2 + 17258 KLNPQQFEV 9 151 551.7983460343517 1101.5821391355032 2 551.7982665896416 MULTI CID FTMS 0 0 0 7751 105435.2578125 0.3930217069316688 -5 0.0833358764648437 3 Unmodified _KLNPQQFEV_ ENSG00000134910|ENST00000392708|STT3A;ENST00000525431.1_1_11:125476222-125478225:+|nuORF;ENST00000531001.1_1_11:125478078-125479612:+|nuORF;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;nc|ENSG00000134910|P46977-2|STT3A 65.23502041540118 0.0231836506122253 6 {[QN]|[E{I|L}]|[KN]}{I|L}[QP]Q{M(Oxidation (M))|F}EV 9 2 + 53.074 0.0 0.0 4.818 4.818 74.886 0.0 0.0 0.0 0.8293789573090109 16.478174818886373 0.8293789573090109 0.8293789573090109 0 0.6421590589602533 0.0 0.3252574989159953 1.8505762035186213 {[QN]|[E{I|L}]|[KN]}{I|L}[QP]Q{M(Oxidation (M))|F}EV;[QP]QN[K{I|L}]{M(Oxidation (M))|F}EV;[QP]Q{I|L}{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}EV;[K{I|L}]N[QP]Q{M(Oxidation (M))|F}EV;[QP]{I|L}Q{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}EV;{[QN]|[E{I|L}]|[KN]}{I|L}[QP][AG]{M(Oxidation (M))|F}EV;[QP]Q{M(Oxidation (M))|F}N[K{I|L}]EV;[QP]QGG[K{I|L}]{M(Oxidation (M))|F}EV;[QP][AG]N[K{I|L}]{M(Oxidation (M))|F}EV;[QP]Q{M(Oxidation (M))|F}{I|L}{[QN]|[E{I|L}]|[KN]}EV 4.818;4.7427;4.6437;4.5864;4.2465;3.9821;3.9114;3.9068;3.9068;3.8234 -;-;-;+;-;-;-;-;-;- + 1483 1 1.538 94867.8 0.5400000214576721 2354 5398 7751 SUDHL4_400M_050219_2,7754 SUDHL4_400M_050219_2,7754,KLNPQQFEV True True KLNPQQFEV 41.286465 551.798266589642 1794338.5 7751.0 ENST00000531001.1_1_11:125478078-125479612:+|nuORF;;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;;nc|ENSG00000134910|P46977-2|STT3A;;ENST00000525431.1_1_11:125476222-125478225:+|nuORF;;ENSG00000134910|ENST00000392708|STT3A 6.545015811920166 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7755 41.29 161.0 419790.0 25 0 39700.0 + 45568 YVDPVNKVL 9 100 523.7972835886276 1045.580014244055 2 523.7979614138603 MULTI CID FTMS 0 0 0 7751 249238.9375 0.2610833423136546 -6 0.114471435546875 4 Unmodified _YVDPVNKVL_ ENSG00000140992|ENST00000342085|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;nc|ENSG00000140992|O15530-4|PDPK1 36.12702656103203 0.0967173616627612 6 {[QN]|[E{I|L}]|[KN]}VPVDYV{I|L} 9 5 + 47.906 0.0 0.0 4.5818 4.5818 76.199 0.0 0.0 0.0 2.2526846188150884 6.368369145285904 2.2526846188150884 2.2526846188150884 0 0.778659694992122 0.0 0.6139829889124311 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}VPVDYV{I|L};[YV]YKVYV{I|L};[YV]D[VP]NKV{I|L};[YV]D[VP]NK{I|L}V;{[QN]|[E{I|L}]|[KN]}VPDVYV{I|L};[YV]D[VP]GGKV{I|L};[YV]D[VP]GGK{I|L}V;{[QN]|[E{I|L}]|[KN]}VPV[VP]{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]};{[QN]|[E{I|L}]|[KN]}VPV[KS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[DP]VNKVYV{I|L} 4.5818;4.3663;3.9727;3.9289;3.8762;3.092;3.0483;2.3548;2.1864;1.2346 -;-;+;-;-;-;-;-;-;- + 355 1 1.538 58817.3 1.0 2355 5398 7751 SUDHL4_400M_050219_2,7755 SUDHL4_400M_050219_2,7755,YVDPVNKVL True True YVDPVNKVL 41.289639 523.79796141386 10626023.0 7751.0 ENSG00000140992|ENST00000342085|PDPK1;;nc|ENSG00000140992|O15530-3|PDPK1;;nc|ENSG00000140992|O15530-4|PDPK1;;nc|ENSG00000140992|O15530-2|PDPK1 5.421262582143148 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7757 41.294 51.0 1040300.0 25 0 89243.0 -1 WRRECPRWWRC 11 53 874.4125980998518 0 874.4128906130791 PEAK CID FTMS 0 0 0 7756 1074992.0 0.9500202764557484 1 -0.0310554504394531 1 2 Carbamidomethyl (C) _WRREC(Carbamidomethyl (C))PRWWRC(Carbamidomethyl (C))_ ENST00000599470.5_2_19:39616427-39616532:+|nuORF 0.2690200627634905 0.4761840153648598 6 PN{I|L}NADQ 7 -1 63.704 0.0 0.0 3.6469 0.0 0.0 261.0808587984398 730.3632906549436 991.4441494533836 0.0 0.0 0.0 0.0 0 1.3494850021680094 0.0 0.0 1.274227503252014 PN{I|L}NADQ 3.6469 - 146 + 1 1.538 40406.8 1.0 2356 5399 7756 SUDHL4_400M_050219_2,7757 SUDHL4_400M_050219_2,7757,WRRECPRWWRC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7758 41.304 525.0 200850.0 25 0 26501.0 + 31031 RLGPVPPGL 9 92 453.2821012985476 904.5496496638953 2 453.2821227908134 MULTI CID FTMS 0 0 0 7756 185163.546875 0.7778968244877259 4 -0.0718116760253906 2 Unmodified _RLGPVPPGL_ ENSG00000146833|ENST00000349062|TRIM4;nc|ENSG00000146833|Q9C037-3|TRIM4;nc|ENSG00000146833|Q9C037|TRIM4 48.345845343767074 0.0439967357579942 6 [R{I|L}]GPVPPG{I|L} 9 0 + 40.881 0.0 0.0 4.5195 4.5195 84.618 0.0 0.0 0.0 4.990371598534011 33.43372183701504 4.990371598534011 10.5115252244738 0 1.5044321917401078 0.0 0.0 0.3494850021680094 + + [R{I|L}]GPVPPG{I|L};[PG][R{I|L}]VPPG{I|L} 4.5195;3.3574 +;- + 84 1 1.538 84978.3 1.0 2357 5399 7756 SUDHL4_400M_050219_2,7758 SUDHL4_400M_050219_2,7758,RLGPVPPGL True True RLGPVPPGL 41.303675 453.282122790813 5318789.5 7756.0 nc|ENSG00000146833|Q9C037|TRIM4;;nc|ENSG00000146833|Q9C037-3|TRIM4;;ENSG00000146833|ENST00000349062|TRIM4 6.587805112202962 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7759 41.309 295.0 245540.0 25 0 18301.0 + 42558 VTPMHGLL 8 98 434.2419937529344 866.4694345726689 2 434.2414733767509 MULTI CID FTMS 0 0 0 7756 190919.15625 0.8410373423419703 3 -0.0542716979980468 3 Unmodified _VTPMHGLL_ REV__ENSG00000126226|ENST00000337344|PCID2;REV__nc|ENSG00000126226|Q5JVF3-2|PCID2;REV__nc|ENSG00000126226|Q5JVF3-3|PCID2;REV__nc|ENSG00000126226|Q5JVF3-4|PCID2 5.760428011301431 0.7893668129297577 6 {I|L}{I|L}[WH]W{I|L} 6 -1 {I|L}{I|L}[WH]W + + 11.594 7.4473 1.0127 1.338 1.338 49.982 0.0 0.0 0.0 0.0 -7.870156338638594 -7.870156338638594 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}[WH]W{I|L} 1.338 - 37 + 1 1.538 61932.3 1.0 2358 5399 7756 SUDHL4_400M_050219_2,7759 SUDHL4_400M_050219_2,7759,VTPMHGLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7760 41.321 667.0 159830.0 25 0 6978.5 -1 0 120 902.916514279926 1803.818475626652 2 903.4198486208916 MULTI CID FTMS 0 0 0 7756 147908.703125 0.9543495579476964 -1 0.0325241088867187 4 6 [NP]P[DV]PGSVEGW{I|L}DP[EP] 17 -1 + 75.023 0.0 0.0 4.1591 4.1591 77.849 0.0 0.0 0.0 13.05462187404089 5.3546787258835735 5.3546787258835735 4.8870797380740925 0 0.3807196863200844 1.2218487496163564 0.5752574989159953 1.1549471895720984 [NP]P[DV]PGSVEGW{I|L}DP[EP];[NP]{I|L}N[HT]SVEGGE{I|L}DP[EP];[NP]P[DV]PGSVEGGE{I|L}DP[EP];[NP]{I|L}NM{[HG]|PP}VEGW{I|L}DP[EP];[NP]{I|L}NME{M(Oxidation (M))|F}{M(Oxidation (M))|F}E{[QV]|[N{I|L}]|[RA]|[KV]}NP[EP];[NP]P[DV]PGSVWGE{I|L}DP[EP];[NP]{I|L}N[HT][WE]GW{I|L}DP[EP];[NP]{I|L}NME{M(Oxidation (M))|F}{M(Oxidation (M))|F}E[YK]{M(Oxidation (M))|F}[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PD{I|L}WGEVSGAA{M(Oxidation (M))|F}A{I|L}Q;[NP]P[VS]K[HC]EGW{I|L}DP[EP] 4.1591;3.8882;3.7613;3.6727;3.6487;3.5544;3.4832;3.4447;3.4354;3.4036 -;-;-;-;-;-;-;-;-;- 8119 1 1.538 74306.5 1.0 2359 5399 7756 SUDHL4_400M_050219_2,7760 SUDHL4_400M_050219_2,7760, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7763 41.33 85.0 656580.0 25 0 40229.0 + 31171 RLPEAIEEV 9 78 528.2904599522032 1054.5663669712062 2 528.2903930544853 MULTI CID FTMS 0 0 0 7762 604280.75 0.4890761190941929 10 -0.2785110473632812 1 Unmodified _RLPEAIEEV_ ENSG00000137106|ENST00000318158|GRHPR;ENST00000377824.8_1_9:37422741-37431094:+|nuORF;ENST00000460882.5_1_9:37422710-37436776:+|nuORF;ENST00000493368.5_1_9:37422710-37428742:+|nuORF 29.84058131909904 0.1515068451768857 6 [R{I|L}][EP]A{I|L}EEV 9 0 + 52.743 0.0 0.0 5.0014 5.0014 89.665 0.0 0.0 0.0 8.362424760180431 38.93053421393809 8.362424760180431 52.74281552322371 0 0.6421590589602533 1.2218487496163564 0.0 0.0 + + [R{I|L}][EP]A{I|L}EEV 5.0014 + + 61 1 1.538 47338.3 1.0 2360 5401 7762 SUDHL4_400M_050219_2,7763 SUDHL4_400M_050219_2,7763,RLPEAIEEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7764 41.332 95.0 533450.0 25 0 101320.0 17482 KPGDGRKVT 9 77 479.2772675551231 956.5399821770462 2 479.2774230837822 MULTI CID FTMS 0 0 0 7762 537707.75 0.679813177338033 15 -0.5000114440917969 2 Unmodified _KPGDGRKVT_ ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1 1.844237919475145 0.850302753031785 6 {I|L} 1 9 10.969 0.0 0.0 1.1467 0.0 0.0 825.4455282969666 0.0 825.4455282969666 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1467 - 4 + 1 1.538 42438.1 1.0 2361 5401 7762 SUDHL4_400M_050219_2,7764 SUDHL4_400M_050219_2,7764,KPGDGRKVT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7765 41.333 75.0 1597700.0 25 0 578370.0 -1 RMKRWHRHCWY 11 78 866.4147013099907 1730.8148496867814 2 866.4164306521416 MULTI CID FTMS 0 0 0 7762 607395.4375 0.781745120089321 -2 0.035125732421875 3 Carbamidomethyl (C),Oxidation (M) _RM(Oxidation (M))KRWHRHC(Carbamidomethyl (C))WY_ ENST00000360093.7_1_2:166027051-166032921:-|nuORF 0.0 0.8751479354844584 6 [MN]PN{I|L}NADQ 9 -1 64.135 0.0 0.0 3.7055 0.0 0.0 0.0 730.3634127252561 730.3634127252561 30.03205960551832 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.0 0.4247425010840047 [MN]PN{I|L}NADQ 3.7055 - 214 + 1 1.538 86181.5 1.0 2362 5401 7762 SUDHL4_400M_050219_2,7765 SUDHL4_400M_050219_2,7765,RMKRWHRHCWY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7766 41.336 107.0 445060.0 25 0 84719.0 + 15787 ISEENFRVM 9 64 562.7737478553139 1123.5329427774277 2 562.7741577029228 MULTI CID FTMS 0 0 0 7762 459425.75 0.5650345582313713 -2 0.035125732421875 4 Unmodified _ISEENFRVM_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 69.10491478415734 0.0214449631113747 6 {I|L}SEEN{M(Oxidation (M))|F}RVM 9 0 + 97.528 0.0 0.0 8.6805 8.6805 93.688 0.0 0.0 0.0 77.60676356474015 10.412800692342117 10.412800692342117 9.208187539523747 0 0.805462187404089 2.0 0.7742275032520141 0.3807196863200844 + + {I|L}SEEN{M(Oxidation (M))|F}RVM;{I|L}SEEGG{M(Oxidation (M))|F}RVM 8.6805;7.8609 +;- + 133 + 1 1.538 41296.6 1.0 2363 5401 7762 SUDHL4_400M_050219_2,7766 SUDHL4_400M_050219_2,7766,ISEENFRVM True True ISEENFRVM 41.335677 562.774157702923 3062961.75 7762.0 ENSG00000138160|ENST00000260731|KIF11;;chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11 8.417828241984049 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7767 41.344 465.0 173410.0 25 0 15053.0 + -1 YMMPVNSEV 9 115 543.2362273215567 1084.4579017099134 2 543.2363769412041 MULTI CID FTMS 0 0 0 7762 101555.203125 0.5159625269976944 -2 0.035125732421875 5 Oxidation (M) _TDLTESSSM(Oxidation (M))V_ ENSG00000143228|ENST00000271452|NUF2;ENST00000487578.2_1_1:163295841-163298095:+|nuORF 15.847184025352805 0.5816416552707754 6 V 1 -1 14.604 0.0 0.0 1.3467 0.0 0.0 967.378676101318 0.0 967.378676101318 0.0 -3.75833099041856 -3.75833099041856 0.0 0 0.0 0.0 0.0 0.0 V 1.3467 + + 421 + 1 1.538 64305.0 1.0 2364 5401 7762 SUDHL4_400M_050219_2,7767 SUDHL4_400M_050219_2,7767,TDLTESSSMV False False YMMPVNSEV 41.343914 543.236376941204 836042.8125 7762.0 ENSG00000143228|ENST00000271452|NUF2;;ENST00000487578.2_1_1:163295841-163298095:+|nuORF 4.014233827590942 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7769 41.351 232.0 232340.0 25 0 35851.0 + 42505 VTLAASHRG 9 83 456.2565762900499 910.4985996468998 2 456.2566711306572 MULTI CID FTMS 0 0 0 7768 225444.5 0.3250307539650358 16 -0.5427589416503906 1 Unmodified _VTLAASHRG_ REV__ENST00000291574.8_1_21:45523422-45523842:+|nuORF 4.75600775471527 0.7486543447549536 6 E 1 -1 8.0989 0.0 0.0 0.88951 0.0 0.0 455.262511006406 323.17002283267817 778.4325338390842 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 E 0.88951 - 3 + 1 1.538 47640.2 1.0 2365 5402 7768 SUDHL4_400M_050219_2,7769 SUDHL4_400M_050219_2,7769,VTLAASHRG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7770 41.361 609.0 139370.0 25 0 10383.0 + -1 HVASELCML 9 144 538.2486541647804 1074.4827553963607 2 538.2490112185478 MULTI CID FTMS 0 0 0 7768 117118.1015625 1.0 0 0.0 2 Carbamidomethyl (C),Oxidation (M) _HVASELC(Carbamidomethyl (C))M(Oxidation (M))L_ REV__ENSG00000090863|ENST00000422840|GLG1;REV__nc|ENSG00000090863|Q92896-2|GLG1;REV__nc|ENSG00000090863|Q92896-3|GLG1 12.531546534597751 0.4974689918368763 6 {[QN]|[E{I|L}]|[KN]}GHS{I|L} 6 -1 34.43 0.0 0.0 3.2043 0.0 0.0 0.0 435.13675078527655 435.13675078527655 -1.0167990792349857 0.0 -1.0167990792349857 0.0 0 0.0 1.6989700043360187 0.805462187404089 0.0 {[QN]|[E{I|L}]|[KN]}GHS{I|L} 3.2043 - 1163 1 1.538 73632.6 1.0 2366 5402 7768 SUDHL4_400M_050219_2,7770 SUDHL4_400M_050219_2,7770,HVASELCML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7772 41.378 800.0 109720.0 25 0 10925.0 -1 0 83 599.6358136523518 1795.8856115572553 3 599.6354247927666 MULTI CID FTMS 0 0 0 7771 123991.0859375 0.5186071195446595 10 -0.3597488403320312 1 6 [H{I|L}]PN{I|L}C(Carbamidomethyl (C))Q[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q 15 -1 + 84.359 0.0 0.0 4.6973 4.6973 80.83 0.0 0.0 0.0 21.75195805246741 68.16061246681059 21.75195805246741 6.690067809585756 0 1.1989700043360187 1.6989700043360187 0.0 0.3494850021680094 [H{I|L}]PN{I|L}C(Carbamidomethyl (C))Q[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q;[H{I|L}]PN{I|L}C(Carbamidomethyl (C))Q[YN]{M(Oxidation (M))|F}{I|L}H{I|L}K;[Q{I|L}]N{I|L}{[YC]|[HE]}Q[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}K;{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}{[YC]|[HE]}Q[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q;[Q{I|L}][YG]{I|L}C(Carbamidomethyl (C))Q[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}K;[Q{I|L}]N{I|L}{[YC]|[HE]}Q[YN]{M(Oxidation (M))|F}{I|L}H{I|L}K;[NP][H{I|L}]{I|L}C(Carbamidomethyl (C))Q[YG]G{M(Oxidation (M))|F}{I|L}H{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}Q{I|L}{[YC]|[HE]}Q[YN]{M(Oxidation (M))|F}{I|L}H{I|L}Q;[Q{I|L}][YG]{I|L}C(Carbamidomethyl (C))Q[YN]{M(Oxidation (M))|F}{I|L}H{I|L}K;[Q{I|L}]N{I|L}{[YC]|[HE]}QEE[R{I|L}]{M(Oxidation (M))|F}{I|L}K 4.6973;4.3248;3.4763;3.3528;3.1408;3.1038;3.0172;2.9803;2.7683;2.7259 -;-;-;-;-;-;-;-;-;- 699 1 1.538 72089.2 0.5899999737739563 2367 5403 7771 SUDHL4_400M_050219_2,7772 SUDHL4_400M_050219_2,7772, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7773 41.382 195.0 240130.0 25 0 32838.0 + 42475 VTGVERIEL 9 93 508.2928682037397 1014.5711834742796 2 508.2929565310478 MULTI CID FTMS 0 0 0 7771 144406.65625 0.3952669883708348 -2 0.0366859436035156 2 Unmodified _VTGVERIEL_ ENSG00000166206|ENST00000311550|GABRB3;nc|ENSG00000166206|P28472-2|GABRB3;nc|ENSG00000166206|P28472-3|GABRB3;nc|ENSG00000166206|P28472-4|GABRB3 32.30548876998284 0.1201446275138228 6 {[QV]|[N{I|L}]|[RA]|[KV]}[TA]{[QN]|[E{I|L}]|[KN]}{I|L}E{I|L} 9 4 + 27.086 0.0 0.0 2.6697 2.6697 77.343 0.0 0.0 0.0 3.018018313141372 13.384767769392742 3.018018313141372 9.01267675330649 0 0.6237125054200234 1.5228787452803376 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}[TA]{[QN]|[E{I|L}]|[KN]}{I|L}E{I|L};{[TV]|[{I|L}S]}[QA]{[QN]|[E{I|L}]|[KN]}{I|L}E{I|L};[VS]{[NV]|[RG]}{[QN]|[E{I|L}]|[KN]}{I|L}E{I|L} 2.6697;1.7814;0.54933 -;-;- 116 1 1.538 41659.4 1.0 2368 5403 7771 SUDHL4_400M_050219_2,7773 SUDHL4_400M_050219_2,7773,VTGVERIEL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7774 41.391 509.0 140690.0 25 0 16827.0 + 39439 VANPNSAIF 9 108 466.74583539966176 931.4771178661236 2 466.7456542849541 MULTI CID FTMS 0 0 0 7771 135937.21875 0.8835141105111891 -2 0.0366859436035156 3 Unmodified _VANPNSAIF_ ENSG00000106682|ENST00000265753|EIF4H;nc|ENSG00000106682|Q15056-2|EIF4H 16.942295170755138 0.3780752226737986 6 [NP]SA{I|L} 5 4 34.556 0.0 0.0 3.7098 0.0 0.0 0.0 446.2041130655954 446.2041130655954 5.4597914914190895 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.75 0.8807196863200843 + [NP]SA{I|L} 3.7098 + + 181 1 1.538 58508.0 1.0 2369 5403 7771 SUDHL4_400M_050219_2,7774 SUDHL4_400M_050219_2,7774,VANPNSAIF False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7775 41.397 360.0 133100.0 25 0 10822.0 + 2236 AQDPSQLSF 9 88 496.7386275206984 991.4627021081968 2 496.7378112673759 MULTI CID FTMS 0 0 0 7771 100239.8515625 0.9137780371382406 1 -0.0494194030761718 4 Unmodified _AQDPSQLSF_ ENSG00000154016|ENST00000284154|GRAP 29.081581746732265 0.1611639662936252 6 {I|L}[QA]D{M(Oxidation (M))|F}{M(Oxidation (M))|F} 6 6 34.213 0.0 0.0 3.4508 0.0 0.0 252.1095049419843 0.0 252.1095049419843 0.0 22.9984899406206 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 {I|L}[QA]D{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3.4508 - 125 + 1 1.538 41898.8 1.0 2370 5403 7771 SUDHL4_400M_050219_2,7775 SUDHL4_400M_050219_2,7775,AQDPSQLSF False True AQDPSQLSF 41.39701 496.737811267376 680094.5625 7771.0 ENSG00000154016|ENST00000284154|GRAP 4.83795960744222 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7776 41.411 800.0 87729.0 25 0 15363.0 -1 0 90 1045.0094170652417 2088.0042811972835 2 1045.513110339642 MULTI CID FTMS 0 0 0 7771 94321.0 1.0 0 0.0 5 6 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}[{I|L}T]VN 9 -1 51.903 0.0 0.0 2.4858 0.0 0.0 0.0 1056.4273518362086 1056.4273518362086 32.43887181533495 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.3807196863200844 1.674742501084005 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}N{M(Oxidation (M))|F}[{I|L}T]VN 2.4858 - 885 1 1.538 52597.2 0.4399999976158142 2371 5403 7771 SUDHL4_400M_050219_2,7776 SUDHL4_400M_050219_2,7776, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7778 41.429 800.0 166190.0 25 0 18275.0 -1 0 140 910.9151338918268 1819.815714850453 2 910.9156371951104 MULTI CID FTMS 0 0 0 7777 134729.046875 0.1186452714212512 11 -0.3737640380859375 1 6 [NP]{I|L}NMHREEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 15 -1 + 74.042 0.0 0.0 4.0686 4.0686 78.222 0.0 0.0 0.0 5.54114250109032 2.442642798745709 2.442642798745709 5.54114250109032 0 1.1237125054200234 0.7695510786217261 0.4247425010840047 1.385151878060192 [NP]{I|L}NMHREEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEE{[YD]|[{M(Oxidation (M))|F}M]}V[EP]{I|L}Q;[NP]{I|L}NMH[VG]EEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GGMHREEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NMHREEN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NMHREEGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEERWN{M(Oxidation (M))|F}{I|L}Q;[NP]{I|L}[TP][DP]QEEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEER[C(Carbamidomethyl (C))R]M{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PNMHREEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.0686;3.7641;3.5724;3.5724;3.5724;3.5724;3.5655;3.5605;3.5125;3.3645 -;-;-;-;-;-;-;-;-;- 20136 1 1.538 89706.8 0.6399999856948853 2372 5404 7777 SUDHL4_400M_050219_2,7778 SUDHL4_400M_050219_2,7778, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7779 41.433 239.0 240360.0 25 0 40294.0 + 20189 LLAETHYQL 9 84 544.2924287691894 1086.5703046051788 2 544.2921020388603 MULTI CID FTMS 0 0 0 7777 206487.734375 1.0 0 0.0 2 Unmodified _LLAETHYQL_ ENSG00000132780|ENST00000350030|NASP;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;ENST00000529239.1_1_8:61850552-61850903:-|nuORF;nc|ENSG00000132780|P49321-2|NASP;nc|ENSG00000132780|P49321-3|NASP;nc|ENSG00000132780|P49321-4|NASP 32.78568957990786 0.1150597335874693 6 {I|L}{I|L}AETH[YQ]{I|L} 9 0 + 64.083 0.0 0.0 5.8978 5.8978 85.594 0.0 0.0 0.0 34.97810928665125 1.1244970863361203 1.1244970863361203 7.283545766807258 0 0.4247425010840047 2.0 0.4247425010840047 0.3807196863200844 + + {I|L}{I|L}AETH[YQ]{I|L};{I|L}{I|L}AEY[WP]PV;{I|L}{I|L}A[MN][RP]C(Carbamidomethyl (C)){I|L};{I|L}{I|L}M{[QG]|[NA]}[RP]C(Carbamidomethyl (C)){I|L} 5.8978;5.2274;4.6123;4.3353 +;-;-;- + 349 + 1 1.538 47799.9 1.0 2373 5404 7777 SUDHL4_400M_050219_2,7779 SUDHL4_400M_050219_2,7779,LLAETHYQL True True LLAETHYQL 41.433064 544.29210203886 1035869.9375 7777.0 nc|ENSG00000132780|P49321-2|NASP;;ENST00000527932.1_1_1:46080644-46081380:+|nuORF;;ENSG00000132780|ENST00000350030|NASP;;nc|ENSG00000132780|P49321-4|NASP;;nc|ENSG00000132780|P49321-3|NASP;;ENST00000529239.1_1_8:61850552-61850903:-|nuORF 3.771563768386841 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7780 41.447 800.0 202020.0 25 0 20329.0 + 37254 TIMPKDIQL 9 172 537.7966742271238 1073.5787955210476 2 537.7967407107353 MULTI CID FTMS 0 0 0 7777 123506.75 0.6491756888450215 -1 0.0494194030761718 3 Oxidation (M) _TIM(Oxidation (M))PKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 61.60191391372663 0.0251951588191061 6 {[QN]|[E{I|L}]|[KN]}NKP{I|L}T{M(Oxidation (M))|F}{I|L} 9 6 + 58.319 0.0 0.0 5.4322 5.4322 79.908 0.0 0.0 0.0 4.790780020815738 16.478174818886373 4.790780020815738 2.890078662816784 0 0.6989700043360187 1.6989700043360187 0.3962566630072955 0.5796896906561032 {[QN]|[E{I|L}]|[KN]}NKP{I|L}T{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}NM{I|L}T{I|L}Q{I|L};[{I|L}T]{M(Oxidation (M))|F}[SG][VP]{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}GGKP{I|L}T{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}NKP{M(Oxidation (M))|F}[{I|L}T]{I|L};{[QN]|[E{I|L}]|[KN]}NM{I|L}T{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}GGM{I|L}T{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}NM{I|L}Q[{I|L}T]{I|L};{[QN]|[E{I|L}]|[KN]}NM{I|L}[WR]{I|L};{[QN]|[E{I|L}]|[KN]}AA[KS]{I|L}{M(Oxidation (M))|F}PV 5.4322;5.163;4.9859;4.5745;4.5607;4.3053;4.3053;4.2036;3.9377;3.7678 -;-;-;-;-;-;-;-;-;- 2697 1 1.538 131803.2 0.550000011920929 2374 5404 7777 SUDHL4_400M_050219_2,7780 SUDHL4_400M_050219_2,7780,TIMPKDIQL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7781 41.461 800.0 157940.0 25 0 15124.0 + 11658 GLDIEGVKTV 10 144 515.7926023608724 1029.5706517885446 2 515.7928954958916 MULTI CID FTMS 0 0 0 7777 89752.25 0.3857114932898693 -3 0.0861053466796875 4 Unmodified _GLDIEGVKTV_ ENSG00000124228|ENST00000618172|DDX27;ENST00000471144.1_1_20:47852594-47852858:+|nuORF;ENST00000484427.5_1_20:47852594-47860368:+|nuORF;nc|ENSG00000124228|Q96GQ7|DDX27 53.40400417844725 0.0601721406801337 6 {[VA]|[{I|L}G]}DEAAK{I|L}T{I|L} 10 5 + 75.154 0.0 0.0 7.2996 7.2996 83.895 0.0 0.0 0.0 1.8778818831691524 15.02697515943354 1.8778818831691524 1.8778818831691524 0 1.7302046884880935 1.6989700043360187 0.2396518287104437 0.6861818737241735 {[VA]|[{I|L}G]}DEAAK{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}GEAAK{I|L}T{I|L};{[VA]|[{I|L}G]}DA[KA]E{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}GA[KA]E{I|L}T{I|L};{[VA]|[{I|L}G]}DA{[CP]|[EA]}K{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}GA{[CP]|[EA]}K{I|L}T{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q[KA]E{I|L}T{I|L};{[VA]|[{I|L}G]}D[KT]V[PS]T{I|L};{[VA]|[{I|L}G]}D[KT]VEVG{I|L};{NN|[MP]|[D{I|L}]|[EV]}G[KT]V[PS]T{I|L} 7.2996;7.1172;6.9231;6.7407;6.6034;6.421;5.7365;5.6538;5.5232;5.4714 -;-;-;-;-;-;-;-;-;- 3819 1 1.538 99090.5 0.449999988079071 2375 5404 7777 SUDHL4_400M_050219_2,7781 SUDHL4_400M_050219_2,7781,GLDIEGVKTV True True GLDIEGVKTV 41.460726 515.792895495892 1854771.125 7777.0 ENST00000471144.1_1_20:47852594-47852858:+|nuORF;;ENST00000484427.5_1_20:47852594-47860368:+|nuORF;;ENSG00000124228|ENST00000618172|DDX27;;nc|ENSG00000124228|Q96GQ7|DDX27 4.33620818456014 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7783 41.467 197.0 308970.0 25 0 34688.0 -1 LQKMPKTL 8 104 487.7900707648381 973.5655885964762 2 487.7905761599541 MULTI CID FTMS 0 0 0 7782 220532.515625 0.601263754244798 8 -0.2604751586914062 1 Oxidation (M) _LQKM(Oxidation (M))PKTL_ nc|ENSG00000288649|Q5JWF8|ACTL10 2.302733041254933 0.8103549651115762 6 {I|L} 1 -1 11.259 0.0 0.0 1.1565 0.0 0.0 842.4707074703028 0.0 842.4707074703028 0.0 2.224682856741307 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1565 + + 33 + 1 1.538 52151.2 1.0 2376 5405 7782 SUDHL4_400M_050219_2,7783 SUDHL4_400M_050219_2,7783,LQKMPKTL False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 7784 41.474 390.0 155340.0 25 0 17275.0 + 12982 HAIPPTLAM 9 92 483.7571500620577 965.4997471909154 2 483.7577087283134 MULTI CID FTMS 0 0 0 7782 118372.3828125 0.1336217476248456 86 -3.0265655517578125 2 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 56.541270873467816 0.0279970378729908 6 {I|L}AH{I|L}A{M(Oxidation (M))|F} 6 5 30.935 0.0 0.0 3.204 0.0 0.0 295.15336806465 0.0 295.15336806465 0.0 13.482587709797324 0.0 0.0 0 1.1549471895720984 0.0 0.0 0.0 {I|L}AH{I|L}A{M(Oxidation (M))|F} 3.204 - 191 1 1.538 50569.6 1.0 2377 5405 7782 SUDHL4_400M_050219_2,7784 SUDHL4_400M_050219_2,7784,HAIPPTLAM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7785 41.477 165.0 392760.0 25 0 72557.0 + 17069 KLDENSAFL 9 89 518.7691720112921 1035.523791089384 2 518.7695190310478 MULTI CID FTMS 0 0 0 7782 327200.0 0.4728003431848457 -4 0.1359596252441406 3 Unmodified _KLDENSAFL_ ENSG00000197694|ENST00000372739|SPTAN1;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1 36.12702656103203 0.0967173616627612 6 SA{M(Oxidation (M))|F}{I|L} 4 5 47.735 0.0 0.0 4.6098 0.0 0.0 599.291307517775 0.0 599.291307517775 0.0 37.64645333192 0.0 0.0 0 0.805462187404089 0.0 0.7742275032520141 0.0 + SA{M(Oxidation (M))|F}{I|L} 4.6098 + + 28 1 1.538 55827.7 1.0 2378 5405 7782 SUDHL4_400M_050219_2,7785 SUDHL4_400M_050219_2,7785,KLDENSAFL True True KLDENSAFL 41.477269 518.769519031048 3901881.75 7782.0 nc|ENSG00000197694|Q13813|SPTAN1;;ENSG00000197694|ENST00000372739|SPTAN1;;nc|ENSG00000197694|Q13813-3|SPTAN1 5.16790755589803 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7786 41.48 162.0 484420.0 25 0 28649.0 + 20470 LLLAAPAQA 9 113 434.2687610949719 866.5229692567437 2 434.2683898806572 MULTI CID FTMS 0 0 0 7782 234089.03125 0.2924295943309598 -6 0.1710853576660156 4 Unmodified _LLLAAPAQA_ ENSG00000196743|ENST00000357164|GM2A 67.03532852164291 0.0222449892513529 6 {I|L}{I|L}AA{I|L}P 6 5 42.664 0.0 0.0 4.9236 0.0 0.0 0.0 285.11967948798195 285.11967948798195 27.46961795817924 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}AA{I|L}P 4.9236 - 266 1 1.538 67672.7 1.0 2379 5405 7782 SUDHL4_400M_050219_2,7786 SUDHL4_400M_050219_2,7786,LLLAAPAQA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7787 41.488 402.0 166350.0 25 0 14369.0 + 23035 SQKIPGMTL 9 115 495.7684327301343 989.5223125270686 2 495.7681152224541 MULTI CID FTMS 0 0 0 7782 121202.1875 0.5323193864163559 -4 0.1359596252441406 5 Unmodified _LSKQDWTI_ nc|ENSG00000156970|O60566-3|BUB1B;ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B 38.15118350030904 0.2652218139009398 6 {[QS]|[NT]}K{I|L} 4 5 29.851 0.0 0.0 3.0168 0.0 0.0 0.0 530.2299674730892 530.2299674730892 13.908103009885764 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.5356668758921829 0.2059771852360797 {[QS]|[NT]}K{I|L} 3.0168 - 348 1 1.538 54577.1 1.0 2380 5405 7782 SUDHL4_400M_050219_2,7787 SUDHL4_400M_050219_2,7787,LSKQDWTI False False SQKIPGMTL 41.48763 495.768115222454 1337029.0 7782.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENSG00000156970|ENST00000287598|BUB1B;;nc|ENSG00000156970|O60566-2|BUB1B 6.922878424326579 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7789 41.5 489.0 146360.0 25 0 14430.0 + 20030 LINRNSIN 8 113 472.2706357465386 942.5267185598772 2 472.2698547244072 MULTI CID FTMS 0 0 0 7788 149251.90625 0.38384402179814 18 -0.6091499328613281 1 Unmodified _LINRNSIN_ REV__ENSG00000104237|ENST00000220676|RP1 14.581692164780916 0.6954967302934248 6 {I|L}{I|L}D 3 -1 19.666 0.0 0.0 2.0865 0.0 0.0 0.0 598.3082181538804 598.3082181538804 4.299846854057474 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {I|L}{I|L}D 2.0865 - 151 1 1.538 58817.2 1.0 2381 5406 7788 SUDHL4_400M_050219_2,7789 SUDHL4_400M_050219_2,7789,LINRNSIN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7790 41.504 199.0 375470.0 25 0 28739.0 + -1 RMWEDPMGA 9 122 562.7283262400465 1123.442099546893 2 562.7291137576103 MULTI CID FTMS 0 0 0 7788 230767.25 0.5746823860330245 -3 0.1261787414550781 2 2 Oxidation (M) _RM(Oxidation (M))WEDPM(Oxidation (M))GA_ ENST00000594893.5_1_19:15511079-15529746:-|nuORF;ENSG00000011243|ENST00000397410|AKAP8L;ENST00000593845.5_1_19:15510111-15529746:-|nuORF;nc|ENSG00000011243|Q9ULX6-2|AKAP8L 29.081581746732265 0.1611639662936252 6 {[TV]|[{I|L}S]}[CS]{NN|[MP]|[D{I|L}]|[EV]}DP{M(Oxidation (M))|F}Q 10 -1 + 53.311 0.0 0.0 4.7453 4.7453 86.895 0.0 0.0 0.0 6.315892290894624 21.936213494365216 6.315892290894624 17.134679910804408 0 0.8807196863200843 1.6989700043360187 0.5629529932484498 0.0 {[TV]|[{I|L}S]}[CS]{NN|[MP]|[D{I|L}]|[EV]}DP{M(Oxidation (M))|F}Q;[PS]AA[YE]DP{M(Oxidation (M))|F}Q;{[MG]|[TS]}{[DS]|[MA]|[CV]|TT}{NN|[MP]|[D{I|L}]|[EV]}DP{M(Oxidation (M))|F}Q;[AG][TP][YE]DP{M(Oxidation (M))|F}Q;{[MG]|[TS]}{[MS]|[{M(Oxidation (M))|F}A]}[DP]DP{M(Oxidation (M))|F}Q;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G[RP][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}Q;[WD][RP][{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}Q;{[MG]|[TS]}[KT]H[{M(Oxidation (M))|F}E]{M(Oxidation (M))|F}Q 4.7453;3.2201;2.6519;2.57;2.17;1.7258;1.1491;0.33339 -;-;-;-;-;-;-;- 748 1 1.538 61730.7 1.0 2382 5406 7788 SUDHL4_400M_050219_2,7790 SUDHL4_400M_050219_2,7790,RMWEDPMGA False False RMWEDPMGA 41.503963 562.72911375761 2166422.5 7788.0 ENST00000594893.5_1_19:15511079-15529746:-|nuORF;;ENSG00000011243|ENST00000397410|AKAP8L;;ENST00000593845.5_1_19:15510111-15529746:-|nuORF;;nc|ENSG00000011243|Q9ULX6-2|AKAP8L 5.893533388773601 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7791 41.509 251.0 219290.0 25 0 12959.0 + -1 YMMPVNSEV 9 83 551.2329387898538 1100.4513246465076 2 551.2329589724541 MULTI CID FTMS 0 0 0 7788 209202.53125 1.0 0 0.0 3 2 Oxidation (M) _YM(Oxidation (M))M(Oxidation (M))PVNSEV_ ENSG00000143228|ENST00000271452|NUF2;ENST00000487578.2_1_1:163295841-163298095:+|nuORF 24.67388899826682 0.2172451872415813 6 [Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[VP]NSEV 9 -1 [Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[VP]NS + + 22.474 18.6 2.1772 2.0423 2.0423 50.416 0.0 0.0 0.0 0.0 -0.8881746517799662 -0.8881746517799662 0.0 0 0.0 0.0 0.5 0.0 [Y{M(Oxidation (M))|F}]{M(Oxidation (M))|F}[VP]NSEV 2.0423 + + 287 + 1 1.538 49110.3 1.0 2383 5406 7788 SUDHL4_400M_050219_2,7791 SUDHL4_400M_050219_2,7791,YMMPVNSEV False False YMMPVNSEV 41.508648 551.232958972454 1583439.875 7788.0 ENSG00000143228|ENST00000271452|NUF2;;ENST00000487578.2_1_1:163295841-163298095:+|nuORF 5.826632499694824 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7792 41.512 182.0 247010.0 25 0 33618.0 + -1 SMYGKEELL 9 81 543.2633569417526 1084.512160950305 2 543.2627441287041 MULTI CID FTMS 0 0 0 7788 151193.390625 1.0 0 0.0 4 2 Carbamidomethyl (C),Oxidation (M) _LLFC(Carbamidomethyl (C))C(Carbamidomethyl (C))M(Oxidation (M))IL_ nc|ENSG00000112984|O95235-2|KIF20A;ENSG00000112984|ENST00000394894|KIF20A 17.086550045450526 0.6584923310065985 6 {I|L}{I|L} 2 -1 16.22 0.0 0.0 1.4956 0.0 0.0 840.3331581200301 0.0 840.3331581200301 0.0 1.0829974631986854 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}{I|L} 1.4956 + + 100 + 1 1.538 39796.4 1.0 2384 5406 7788 SUDHL4_400M_050219_2,7792 SUDHL4_400M_050219_2,7792,LLFCCMIL False False SMYGKEELL 41.512178 543.262744128704 958641.8125 7788.0 nc|ENSG00000112984|O95235-2|KIF20A;;ENSG00000112984|ENST00000394894|KIF20A 0.2970261375109355 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7793 41.518 338.0 150270.0 25 0 18504.0 23217 LSSRGQLQL 9 90 501.2909857587062 1000.5674185842124 2 501.2904846072197 MULTI CID FTMS 0 0 0 7788 104522.3203125 0.3002114180560148 26 -0.8692207336425781 5 Unmodified _LSSRGQLQL_ ENST00000531038.5_1_4:8472779-8495174:+|nuORF 10.823927491677226 0.5436922275383211 6 VVDW 4 9 13.812 0.0 0.0 1.3804 0.0 0.0 0.0 498.2907503717407 498.2907503717407 2.553221444316627 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VVDW 1.3804 - 16 + 1 1.538 45663.5 1.0 2385 5406 7788 SUDHL4_400M_050219_2,7793 SUDHL4_400M_050219_2,7793,LSSRGQLQL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7795 41.523 12.0 4026900.0 25 0 726630.0 + 33533 SILEHQIQV 9 70 533.7981254596042 1065.5816979860083 2 533.7985107302666 MULTI CID FTMS 0 0 0 7794 4319867.5 0.8766094749374331 2 -0.0610275268554687 1 Unmodified _SILEHQIQV_ ENSG00000104738|ENST00000649973|MCM4 49.93300154707207 0.0405168250806675 6 [HQ]E{I|L}{I|L}S{I|L}QV 9 6 + 52.386 0.0 0.0 4.9162 4.9162 76.09 0.0 0.0 0.0 4.762036441594191 18.556766893690494 4.762036441594191 1.4916623986031396 0 0.5242275032520141 0.0 1.4802046884880935 0.0 [HQ]E{I|L}{I|L}S{I|L}QV;[HQ]{I|L}E{I|L}S{I|L}QV;[Q{I|L}]HE{I|L}S{I|L}QV;[HQ]E{I|L}{I|L}QTVV;[HQ]{I|L}E{I|L}QTVV;[HQ]E{I|L}{I|L}SAAVV;[HQ]{I|L}[{I|L}T]D{I|L}QV;[HQ]{I|L}E{I|L}SAAVV;[HQ]E{I|L}Q{I|L}TVV;[Q{I|L}]HE{I|L}QTVV 4.9162;4.7762;4.2467;2.9381;2.7981;2.755;2.6886;2.6151;2.3731;2.2686 -;-;-;-;-;-;-;-;-;- 271 1 1.538 44769.8 1.0 2386 5407 7794 SUDHL4_400M_050219_2,7795 SUDHL4_400M_050219_2,7795,SILEHQIQV True True SILEHQIQV 41.52308 533.798510730267 48931856.0 7794.0 ENSG00000104738|ENST00000649973|MCM4 4.840972900390625 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7796 41.525 93.0 525610.0 25 0 85789.0 + 15784 ISEENFRVM 9 72 570.7708052530172 1139.5270575728343 2 570.7714111208916 MULTI CID FTMS 0 0 0 7794 667584.0625 0.6549032526812397 2 -0.0610275268554687 2 Oxidation (M) _ISEENFRVM(Oxidation (M))_ chr10:92637309-92637391|37|10.81|0.46|4.54|+|ENST00000677720|KIF11,KIF11;ENSG00000138160|ENST00000260731|KIF11 78.7280429016045 0.0178249292250809 6 {I|L}SEEN{M(Oxidation (M))|F}RV{M(Oxidation (M))|F} 9 0 + 104.69 0.0 0.0 9.1872 9.1872 94.134 0.0 0.0 0.0 94.51335651524651 13.46787486224656 13.46787486224656 9.208187539523747 0 0.9247425010840048 2.0 1.110924374808178 0.0 + + {I|L}SEEN{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};{I|L}SEEGG{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};{I|L}S{M(Oxidation (M))|F}WWRV{M(Oxidation (M))|F};[YT]{[HG]|PP}N{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};[YT]R{M(Oxidation (M))|F}N[HC]S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[HC]N{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};[YT]R{M(Oxidation (M))|F}N{[HG]|PP}V{M(Oxidation (M))|F};[YT]{[HG]|PP}GG{M(Oxidation (M))|F}RV{M(Oxidation (M))|F};[YT]R{M(Oxidation (M))|F}GG[HC]S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}[HC]GG{M(Oxidation (M))|F}RV{M(Oxidation (M))|F} 9.1872;8.3791;6.1779;3.2172;2.9031;2.7935;2.5775;2.4091;2.0951;1.9854 +;-;-;-;-;-;-;-;-;- + 222 + 1 1.538 42478.7 1.0 2387 5407 7794 SUDHL4_400M_050219_2,7796 SUDHL4_400M_050219_2,7796,ISEENFRVM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7798 41.532 247.0 254250.0 25 0 40456.0 + 38547 TSSKKSGL 8 92 404.2329155607814 806.4512781883628 2 404.2322265505791 MULTI CID FTMS 0 0 0 7797 143754.75 0.1434814178989026 -5 0.1636772155761718 1 Unmodified _TSSKKSGL_ REV__ENST00000511058.1_1_3:123385915-123401122:-|nuORF 7.910154910731844 0.7763180056447161 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.538 54616.8 1.0 2388 5408 7797 SUDHL4_400M_050219_2,7798 SUDHL4_400M_050219_2,7798,TSSKKSGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7799 41.537 274.0 244200.0 25 0 20343.0 + 16462 KAINVFVSA 9 103 474.7786540896645 947.5427552461292 2 474.7787963747978 MULTI CID FTMS 0 0 0 7797 126436.6640625 0.552830202600765 -1 0.0068397521972656 2 Unmodified _KAINVFVSA_ ENSG00000114209|ENST00000392750|PDCD10 25.399314129420983 0.2080152500878129 6 NV{M(Oxidation (M))|F}V{[SA]|[TG]} 6 3 28.205 0.0 0.0 2.9766 0.0 0.0 312.21638686347814 0.0 312.21638686347814 0.0 5.475081665376056 0.0 0.0 0 0.5 0.0 0.0 0.3054621874040891 + NV{M(Oxidation (M))|F}V{[SA]|[TG]} 2.9766 + + 297 1 1.538 57680.7 1.0 2389 5408 7797 SUDHL4_400M_050219_2,7799 SUDHL4_400M_050219_2,7799,KAINVFVSA False True KAINVFVSA 41.537304 474.778796374798 1034418.0625 7797.0 ENSG00000114209|ENST00000392750|PDCD10 4.324865976969401 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7800 41.544 398.0 215090.0 25 0 44196.0 + 42525 VTLGPQLP 8 113 412.7464469154773 823.4783408977545 2 412.7459899783134 MULTI CID FTMS 0 0 0 7797 109050.9296875 0.176043770335465 -4 0.1142578125 3 Unmodified _VTLGPQLP_ REV__ENST00000570069.5_1_16:1827428-1828166:+|nuORF 2.577480529830294 0.808687252328423 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.538 71300.0 1.0 2390 5408 7797 SUDHL4_400M_050219_2,7800 SUDHL4_400M_050219_2,7800,VTLGPQLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7801 41.552 404.0 167240.0 25 0 12474.0 18753 LALSRQEI 8 105 465.2739553353937 928.5333577375874 2 465.2732421755791 MULTI CID FTMS 0 0 0 7797 106612.515625 0.8274175770306043 3 -0.0781478881835937 4 Unmodified _LALSRQEI_ ENSG00000066427|ENST00000644486|ATXN3;ENST00000553309.5_1_14:92547307-92572896:-|nuORF;ENST00000553686.5_1_14:92547307-92572896:-|nuORF;ENST00000554214.5_1_14:92547307-92562474:-|nuORF;ENST00000555958.5_1_14:92547307-92572896:-|nuORF;ENST00000556274.5_1_14:92547307-92555106:-|nuORF;nc|ENSG00000066427|P54252-1|ATXN3;nc|ENSG00000066427|P54252-3|ATXN3;nc|ENSG00000066427|P54252-4|ATXN3;nc|ENSG00000066427|P54252-5|ATXN3 15.847184025352805 0.6768015514314958 6 [{I|L}A]{I|L}S 4 4 43.698 0.0 0.0 4.7061 0.0 0.0 0.0 541.2728975885374 541.2728975885374 31.99092531119419 0.0 0.0 0.0 0 0.75 2.0 0.0 0.0 + [{I|L}A]{I|L}S 4.7061 + + 81 + 1 1.538 55007.8 1.0 2391 5408 7797 SUDHL4_400M_050219_2,7801 SUDHL4_400M_050219_2,7801,LALSRQEI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7802 41.565 800.0 116780.0 25 0 9588.0 + -1 WRFHHSRCMRQ 11 102 808.8786281478065 1615.7427033624128 2 809.8840820193291 MULTI CID FTMS 0 0 0 7797 98494.265625 0.9593668358136176 2 -0.0705604553222656 5 Carbamidomethyl (C),Oxidation (M) _WRFHHSRC(Carbamidomethyl (C))M(Oxidation (M))RQ_ REV__ENST00000486765.5_1_1:3807197-3807341:-|nuORF 4.897010918128616 0.8520435188433833 6 EPN{I|L}NADQKKA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Q 14 -1 + 99.584 0.0 0.0 6.1634 6.1634 82.257 0.0 0.0 0.0 27.636953339726745 11.937499767655794 11.937499767655794 2.968740358928244 0 1.2302046884880935 1.0969100130080565 0.0 1.0941876774005248 EPN{I|L}NADQKKA{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Q;EPN{I|L}NADQR[{M(Oxidation (M))|F}E]RQ;EPN{I|L}NWQR[{M(Oxidation (M))|F}E]RQ;EPN{I|L}NADQ[VG][{M(Oxidation (M))|F}E]RQ;EPN{I|L}GGADQR[{M(Oxidation (M))|F}E]RQ;EPN{I|L}NAD[AG]R[{M(Oxidation (M))|F}E]RQ;EPGG{I|L}NADQR[{M(Oxidation (M))|F}E]RQ;EPN{I|L}NWQ[VG][{M(Oxidation (M))|F}E]RQ;EPGG{I|L}NWQR[{M(Oxidation (M))|F}E]RQ;EPN{I|L}NW[AG]R[{M(Oxidation (M))|F}E]RQ 6.1634;5.9796;5.5686;5.4181;5.4181;5.4181;5.4181;5.0055;5.0055;5.0055 -;-;-;-;-;-;-;-;-;- 2040 + 1 1.538 69172.3 0.4799999892711639 2392 5408 7797 SUDHL4_400M_050219_2,7802 SUDHL4_400M_050219_2,7802,WRFHHSRCMRQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7803 41.579 800.0 139210.0 25 0 42716.0 -1 0 87 629.3826319672536 628.3753555006535 1 631.3875610232353 MULTI CID FTMS 0 0 0 7797 102836.8046875 1.0 0 0.0 6 6 Y 1 -1 12.218 0.0 0.0 1.9445 0.0 0.0 447.3010127045582 0.0 447.3010127045582 0.0 2.218487496163561 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.9445 - 11 + 1 1.538 87448.8 0.5 2393 5408 7797 SUDHL4_400M_050219_2,7803 SUDHL4_400M_050219_2,7803, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7805 41.585 97.0 755470.0 25 0 59540.0 43546 WWWWIWWQWW 10 71 874.9028227946941 1747.791092656188 2 874.9103271365166 MULTI CID FTMS 0 0 0 7804 605982.5625 0.101081555813345 -6 0.217864990234375 1 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 15 13 + 85.587 0.0 0.0 4.8969 4.8969 81.553 0.0 0.0 0.0 61.14516253185087 9.396512253176825 9.396512253176825 6.690067809585756 0 1.274227503252014 0.0 0.6747425010840047 1.579689690656103 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NWQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}DANQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[{M(Oxidation (M))|F}H]|[RQ]}RQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}WNQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[TP]{[QN]|[E{I|L}]|[KN]}QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[{M(Oxidation (M))|F}H]|[RQ]}RQWN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[TP]{[QN]|[E{I|L}]|[KN]}QWN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[{M(Oxidation (M))|F}H]|[RQ]}RQDAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{[QV]|[N{I|L}]|[RA]|[KV]}{[NV]|[RG]}QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.8969;4.5141;4.151;4.1296;4.0412;3.9978;3.7481;3.6151;3.6118;3.6118 -;-;-;-;-;-;-;-;-;- 937 + 1 1.538 55744.8 1.0 2394 5409 7804 SUDHL4_400M_050219_2,7805 SUDHL4_400M_050219_2,7805,WWWWIWWQWW False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 7806 41.588 135.0 358480.0 25 0 31731.0 + 45569 YVDPVNKVL 9 78 523.7972835886276 1045.580014244055 2 523.7981445193291 MULTI CID FTMS 0 0 0 7804 217850.296875 0.2282030416380944 5 -0.1550865173339843 2 Unmodified _YVDPVNKVL_ ENSG00000140992|ENST00000342085|PDPK1;nc|ENSG00000140992|O15530-2|PDPK1;nc|ENSG00000140992|O15530-3|PDPK1;nc|ENSG00000140992|O15530-4|PDPK1 14.838274106304384 0.4350285940865338 6 [YV]D 3 6 39.705 0.0 0.0 3.7974 0.0 0.0 0.0 665.4003001303413 665.4003001303413 10.831049931792547 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + [YV]D 3.7974 + + 67 + 1 1.538 43624.2 1.0 2395 5409 7804 SUDHL4_400M_050219_2,7806 SUDHL4_400M_050219_2,7806,YVDPVNKVL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7807 41.596 428.0 451070.0 25 0 84152.0 + 5326 DLFFPGPL 8 102 453.24224196645423 904.4699309997084 2 453.2421447634697 MULTI CID FTMS 0 0 0 7804 143155.90625 0.84477814377952 -1 0.0541877746582031 3 Unmodified _DLFFPGPL_ REV__ENST00000569146.1_1_16:81726864-81730296:+|nuORF 10.183394434864962 0.7604730176254005 6 AQWHP 5 -1 28.5 0.0 0.0 3.151 0.0 0.0 0.0 282.14625327662213 282.14625327662213 4.318722087674658 0.0 0.0 0.0 0 0.5044321917401079 0.0 0.0 0.4247425010840047 AQWHP 3.151 - 79 + 1 1.538 158176.6 1.0 2396 5409 7804 SUDHL4_400M_050219_2,7807 SUDHL4_400M_050219_2,7807,DLFFPGPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7809 41.601 109.0 425140.0 25 0 77697.0 + 23155 LSPVVCQLV 9 78 479.2772675551231 956.5399821770462 2 479.2772094607353 MULTI CID FTMS 0 0 0 7808 466592.28125 0.5899033094426548 24 -0.7973403930664062 1 Unmodified _LSPVVCQLV_ REV__ENSG00000170927|ENST00000371117|PKHD1;REV__nc|ENSG00000170927|P08F94-2|PKHD1 4.3292370932331545 0.7635526921153418 6 {M(Oxidation (M))|F} 1 -1 10.181 0.0 0.0 1.0644 0.0 0.0 791.4608176036072 0.0 791.4608176036072 0.0 0.2662275597661256 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0644 - 6 + 1 1.538 40789.7 1.0 2397 5410 7808 SUDHL4_400M_050219_2,7809 SUDHL4_400M_050219_2,7809,LSPVVCQLV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7810 41.603 135.0 417250.0 25 0 63569.0 20774 LLTWTEPPV 9 83 528.2904599522032 1054.5663669712062 2 528.2919189333916 MULTI CID FTMS 0 0 0 7808 377896.4375 0.3058514160380274 19 -0.6491508483886719 2 Unmodified _LLTWTEPPV_ ENSG00000168477|ENST00000644971|TNXB;ENST00000498094.1_1_6:32010712-32011087:-|nuORF;ENST00000507684.1_1_6:31976393-31978991:-|nuORF;nc|ENSG00000168477|P22105-1|TNXB;nc|ENSG00000168477|P22105-2|TNXB;nc|ENSG00000168477|P22105-4|TNXB 18.13498045792455 0.3457906370836843 6 {I|L}EEV 4 6 35.191 0.0 0.0 3.337 0.0 0.0 566.3179798810562 0.0 566.3179798810562 0.0 -6.922262144776354 -6.922262144776354 0.0 0 0.3252574989159953 0.0 0.0 0.0 {I|L}EEV 3.337 - 404 1 1.538 48222.6 1.0 2398 5410 7808 SUDHL4_400M_050219_2,7810 SUDHL4_400M_050219_2,7810,LLTWTEPPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7812 41.62 800.0 153390.0 25 0 24685.0 + 9632 FLMKNSDLYGA 11 127 637.8076388871981 1273.600724841196 2 637.8087646365166 MULTI CID FTMS 0 0 0 7811 153069.78125 0.9315271669028812 1 -0.0477218627929687 1 Oxidation (M) _FLM(Oxidation (M))KNSDLYGA_ ENSG00000171241|ENST00000303383|SHCBP1 80.6760300276096 0.0071538679453211 6 {[DA]|[EG]}V[SG]K{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}YQ 11 10 + 74.995 0.0 0.0 5.8884 5.8884 84.245 0.0 0.0 0.0 5.669162554467391 9.128498242811006 5.669162554467391 5.669162554467391 0 0.4247425010840047 0.638272163982407 0.9916440611282626 0.9456290139465237 {[DA]|[EG]}V[SG]K{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}YQ;[VS]ENK{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}YQ;{[TV]|[{I|L}S]}DNK{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}YQ;{[DA]|[EG]}V[SG]KYM{I|L}YQ;{[DA]|[EG]}V[SG]K{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}YQ;[Y{I|L}]MKNSD{I|L}YQ;[VS]ENKYM{I|L}YQ;[VS]EGGK{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}YQ;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}KNSD{I|L}YQ;{[DA]|[EG]}VQQY{M(Oxidation (M))|F}{I|L}YQ 5.8884;5.4433;5.2429;5.2241;5.0221;4.8961;4.7789;4.7237;4.7133;4.6005 -;-;-;-;-;-;-;-;-;- 3421 1 1.538 95757.0 0.6499999761581421 2399 5411 7811 SUDHL4_400M_050219_2,7812 SUDHL4_400M_050219_2,7812,FLMKNSDLYGA True False FLMKNSDLYGA 41.61966 637.808764636517 870103.625 7811.0 ENSG00000171241|ENST00000303383|SHCBP1 8.51533571879069 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7813 41.63 578.0 234540.0 25 0 35689.0 + 10511 FVDDYTVRV 9 108 557.2824474005594 1112.5503418679186 2 557.2826415896416 MULTI CID FTMS 0 0 0 7811 121877.7578125 0.0813889857650963 -4 0.0849876403808593 2 Unmodified _FVDDYTVRV_ ENSG00000115233|ENST00000409682|PSMD14 47.594388314883695 0.0456443387682827 6 {M(Oxidation (M))|F}VDDYTV[RV] 9 0 + 75.966 0.0 0.0 6.8281 6.8281 94.056 0.0 0.0 0.0 58.474636872028896 10.999161495794423 10.999161495794423 21.760912590556813 0 1.174742501084005 0.0 0.4247425010840047 0.5356668758921829 + + {M(Oxidation (M))|F}VDDYTV[RV];{M(Oxidation (M))|F}VDDV[YT][RV];{M(Oxidation (M))|F}VDVD[YT][RV];{M(Oxidation (M))|F}VVDD[YT][RV];{M(Oxidation (M))|F}VVKYD{[QS]|[NT]}Q;{M(Oxidation (M))|F}VD{[HG]|PP}{[{M(Oxidation (M))|F}H]|[RQ]}[RV];{M(Oxidation (M))|F}VVD[YK]{[QS]|[NT]}Q;{M(Oxidation (M))|F}VDV[YK]{[QS]|[NT]}Q;[KQ]{[YC]|[HE]}[KT]DVE;[{M(Oxidation (M))|F}V][Y{M(Oxidation (M))|F}][NP]VVE 6.8281;4.8721;4.3092;3.7245;3.6391;3.4356;3.1937;2.9472;2.2586;1.0492 +;-;-;-;-;-;-;-;-;- + 334 + 1 1.538 108605.2 1.0 2400 5411 7811 SUDHL4_400M_050219_2,7813 SUDHL4_400M_050219_2,7813,FVDDYTVRV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7814 41.641 666.0 174190.0 25 0 13912.0 + 40977 VLYPEPVRV 9 130 536.3127590103446 1070.6109650874891 2 536.3134643435478 MULTI CID FTMS 0 0 0 7811 94668.4140625 0.4644870955799742 4 -0.1813583374023437 3 Unmodified _VLYPEPVRV_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-6|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 12.872603262515298 0.4882369880199512 6 [{I|L}V]YPE 5 4 45.7 0.0 0.0 4.2686 0.0 0.0 0.0 466.27860182083833 466.27860182083833 30.505667806418582 0.0 0.0 0.0 0 0.8252574989159953 1.5228787452803376 0.0 0.0 + [{I|L}V]YPE 4.2686 + + 348 + 1 1.538 90468.0 1.0 2401 5411 7811 SUDHL4_400M_050219_2,7814 SUDHL4_400M_050219_2,7814,VLYPEPVRV False True VLYPEPVRV 41.641383 536.313464343548 1081955.125 7811.0 nc|ENSG00000155657|Q8WZ42-3|TTN;;nc|ENSG00000155657|Q8WZ42-13|TTN;;nc|ENSG00000155657|Q8WZ42-9|TTN;;nc|ENSG00000155657|Q8WZ42-12|TTN;;nc|ENSG00000155657|Q8WZ42-4|TTN;;nc|ENSG00000155657|Q8WZ42-5|TTN;;nc|ENSG00000155657|Q8WZ42-11|TTN;;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant;;nc|ENSG00000155657|Q8WZ42-10|TTN;;ENSG00000155657|ENST00000589042|TTN;;nc|ENSG00000155657|Q8WZ42-2|TTN;;nc|ENSG00000155657|Q8WZ42-6|TTN;;nc|ENSG00000155657|Q8WZ42-7|TTN;;nc|ENSG00000155657|Q8WZ42|TTN;;nc|ENSG00000155657|Q8WZ42-8|TTN 6.344990571339925 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7815 41.651 547.0 183500.0 25 0 26219.0 + 14704 IIYDRDFSY 9 100 596.2874377614638 1190.5603225897275 2 596.2883788943291 MULTI CID FTMS 0 0 0 7811 88326.2265625 0.5489045850685422 -1 0.0075874328613281 4 Unmodified _IIYDRDFSY_ ENSG00000167325|ENST00000300738|RRM1 45.739877483867886 0.0497104363764649 6 {I|L}{I|L}YD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]SY 10 4 + 78.963 0.0 0.0 6.6324 6.6324 84.323 0.0 0.0 0.0 41.53533975330649 14.146518864155126 14.146518864155126 3.3939438749951734 0 1.1861818737241734 2.0 1.1237125054200234 0.0 {I|L}{I|L}YD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[PS]SY;{I|L}{I|L}YD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}RDY;{I|L}{I|L}Y[WY][PS]SY;{I|L}{I|L}YD{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{[ET]|[MV]}{[CT]|[{M(Oxidation (M))|F}G]};{I|L}{I|L}Y[WY]{[ET]|[MV]}{[CT]|[{M(Oxidation (M))|F}G]};{I|L}{I|L}[HM]{M(Oxidation (M))|F}D[C(Carbamidomethyl (C))K]Q;{I|L}{I|L}[RD]{[YD]|[{M(Oxidation (M))|F}M]}{M(Oxidation (M))|F}SY;{I|L}{I|L}[HM]{M(Oxidation (M))|F}D[WM]V;{I|L}{I|L}[HM]{M(Oxidation (M))|F}[WE]C{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[WE]{M(Oxidation (M))|F}S{I|L}{I|L}Y 6.6324;6.3473;6.0837;4.5775;4.0289;3.6191;3.5172;3.3063;3.2715;2.3795 -;-;-;-;-;-;-;-;-;- 353 + 1 1.538 77736.1 1.0 2402 5411 7811 SUDHL4_400M_050219_2,7815 SUDHL4_400M_050219_2,7815,IIYDRDFSY True True IIYDRDFSY 41.650998 596.288378894329 926279.5 7811.0 ENSG00000167325|ENST00000300738|RRM1 7.50316588083903 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7817 41.658 142.0 274100.0 25 0 21639.0 22939 LSEPQKSF 8 77 468.24466754901465 934.4747821648292 2 468.2449523806572 MULTI CID FTMS 0 0 0 7816 219627.6875 0.9913227176494824 2 -0.083404541015625 1 Unmodified _LSEPQKSF_ ASXL3|p.P2133S|1|0.07|ENSG00000141431|chr18:33746245-33746245|C/T|missense_variant 9.347437153973935 0.7675937258251505 6 {[TV]|[{I|L}S]}HA 4 6 25.406 0.0 0.0 2.7188 0.0 0.0 0.0 523.2391919150824 523.2391919150824 7.447274948966935 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}HA 2.7188 - 77 1 1.538 34421.1 1.0 2403 5412 7816 SUDHL4_400M_050219_2,7817 SUDHL4_400M_050219_2,7817,LSEPQKSF False False False False variant PXD020620_cell_line SUDHL4_400M_050219_2 7818 41.664 331.0 180320.0 25 0 22144.0 + 15325 IPLMPFPP 8 96 456.2565762900499 910.4985996468998 2 456.2567626833916 MULTI CID FTMS 0 0 0 7816 97882.4765625 0.141120387310732 26 -0.9704742431640624 2 Unmodified _IPLMPFPP_ REV__ENST00000528175.1_1_8:144803765-144804224:+|nuORF 6.354104778181461 0.7857632046190106 6 {I|L} 1 -1 9.3323 0.0 0.0 1.025 0.0 0.0 779.4042830959218 0.0 779.4042830959218 0.0 0.4588518667782271 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.025 + + 8 + 1 1.538 50464.4 1.0 2404 5412 7816 SUDHL4_400M_050219_2,7818 SUDHL4_400M_050219_2,7818,IPLMPFPP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7819 41.666 137.0 304400.0 25 0 39268.0 + 39288 VADNQELQL 9 83 515.2640568027042 1028.5135606722083 2 515.2643310427666 MULTI CID FTMS 0 0 0 7816 186104.875 0.7263583720909669 -1 0.0477218627929687 3 Unmodified _VADNQELQL_ ENSG00000070366|ENST00000263073|SMG6 16.942295170755138 0.3780752226737986 6 [Q{I|L}]E 3 7 21.444 0.0 0.0 2.085 0.0 0.0 0.0 655.304978479102 655.304978479102 3.952877223150395 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.6549471895720985 [Q{I|L}]E 2.085 - 170 1 1.538 38990.0 1.0 2405 5412 7816 SUDHL4_400M_050219_2,7819 SUDHL4_400M_050219_2,7819,VADNQELQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7820 41.67 174.0 266390.0 25 0 24897.0 28983 QDRKRGRA 8 98 493.7818362811986 985.5491196291972 2 493.7797424197197 MULTI CID FTMS 0 0 0 7816 177439.984375 0.1881827120507432 -3 0.0716819763183593 4 Unmodified _QDRKRGRA_ ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000165732|Q9NR30-2|DDX21 9.347437153973935 0.7675937258251505 6 [{I|L}A][TA]A{I|L}{I|L}[WQ] 9 9 + 40.876 0.0 0.0 4.1475 4.1475 77.246 0.0 0.0 0.0 14.539974558725248 7.147642715192504 7.147642715192504 4.24742501084004 0 0.3494850021680094 2.0 0.4247425010840047 0.0 [{I|L}A][TA]A{I|L}{I|L}[WQ];[{I|L}A][TA]{I|L}A{I|L}[WQ];[{I|L}A][K{I|L}]D{I|L}[WQ];{NN|[MP]|[D{I|L}]|[EV]}KA{I|L}{I|L}[WQ];{NN|[MP]|[D{I|L}]|[EV]}K{I|L}A{I|L}[WQ];{[QS]|[NT]}[{I|L}V]{I|L}{I|L}[WQ];{[VA]|[{I|L}G]}[VS]A{I|L}{I|L}[WQ];{[QV]|[N{I|L}]|[RA]|[KV]}{[TV]|[{I|L}S]}{I|L}{I|L}[WQ];{[VA]|[{I|L}G]}[VS]{I|L}A{I|L}[WQ];{[VA]|[{I|L}G]}G{[TV]|[{I|L}S]}{I|L}{I|L}[WQ] 4.1475;3.7166;2.9609;2.6722;2.2412;1.686;1.6056;1.2538;1.1747;0.68931 -;-;-;-;-;-;-;-;-;- 309 1 1.538 41361.5 1.0 2406 5412 7816 SUDHL4_400M_050219_2,7820 SUDHL4_400M_050219_2,7820,QDRKRGRA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7821 41.676 340.0 352060.0 25 0 49178.0 + 10419 FTDAGLKEL 9 130 497.2660960711856 992.5176392091712 2 497.2663452029228 MULTI CID FTMS 0 0 0 7816 134870.171875 0.1888616599206157 -3 0.0716819763183593 5 Unmodified _FTDAGLKEL_ ENSG00000136261|ENST00000258761|BZW2 55.50274090549119 0.0285720310785888 6 ADTE 4 7 43.488 0.0 0.0 4.3816 0.0 0.0 558.3383657453602 0.0 558.3383657453602 0.0 -8.517281225732418 -8.517281225732418 0.0 0 0.7742275032520141 0.0 0.3807196863200844 0.0 ADTE 4.3816 - 1661 1 1.538 94131.9 1.0 2407 5412 7816 SUDHL4_400M_050219_2,7821 SUDHL4_400M_050219_2,7821,FTDAGLKEL True True FTDAGLKEL 41.676016 497.266345202923 3070471.25 7816.0 ENSG00000136261|ENST00000258761|BZW2 6.565474987030029 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7822 41.68 191.0 255820.0 25 0 21019.0 -1 ALKMEECI 8 78 505.2383260929425 1008.462099252685 2 505.2384826540947 MULTI CID FTMS 0 0 0 7816 134173.734375 1.0 0 0.0 6 Carbamidomethyl (C),Oxidation (M) _ALKM(Oxidation (M))EEC(Carbamidomethyl (C))I_ ENSG00000170381|ENST00000643230|SEMA3E;nc|ENSG00000170381|O15041-2|SEMA3E 6.354104778181461 0.7857632046190106 6 H{I|L} 2 -1 14.949 0.0 0.0 1.4823 0.0 0.0 740.3084260122538 0.0 740.3084260122538 0.0 1.8495564253589687 0.0 0.0 0 0.0 0.0 0.0 0.0 H{I|L} 1.4823 - 29 + 1 1.538 43306.0 1.0 2408 5412 7816 SUDHL4_400M_050219_2,7822 SUDHL4_400M_050219_2,7822,ALKMEECI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7823 41.694 800.0 103470.0 25 0 5384.7 + 17160 KLIHPTENITF 11 105 656.8661223262162 1311.7176917192323 2 657.3679077029228 MULTI CID FTMS 0 0 0 7816 90907.2265625 1.0 0 0.0 7 Unmodified _KLIHPTENITF_ ENSG00000183624|ENST00000383463|HMCES 18.373094154950223 0.6529654022026722 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]MRR{I|L}T{M(Oxidation (M))|F} 10 8 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]MRR{I|L} + + 24.024 19.67 1.8813 1.8315 1.8315 50.259 0.0 0.0 0.0 0.0 5.523787536356576 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]MRR{I|L}T{M(Oxidation (M))|F} 1.8315 - 315 + 1 1.538 66426.7 0.5 2409 5412 7816 SUDHL4_400M_050219_2,7823 SUDHL4_400M_050219_2,7823,KLIHPTENITF False True KLIHPTENITF 41.693522 656.8669 618540.1875 7816.0 ENSG00000183624|ENST00000383463|HMCES 5.367576758066813 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7824 41.707 800.0 46830.0 25 0 3676.9 -1 0 53 964.4435897508891 2890.308939852868 3 965.1125366091728 MULTI CID FTMS 0 0 0 7816 120302.3203125 1.0 0 0.0 8 6 D 1 -1 6.9897 0.0 0.0 0.24183 0.0 0.0 862.3512835615157 1909.9046114557248 2772.255895017241 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.24183 - 8 + 1 1.538 36824.5 0.5199999809265137 2410 5412 7816 SUDHL4_400M_050219_2,7824 SUDHL4_400M_050219_2,7824, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7825 41.721 800.0 99316.0 25 0 8247.1 -1 LQMKEKTMK 9 112 584.8043170453008 1167.5940811574014 2 585.3072387576103 MULTI CID FTMS 0 0 0 7816 94798.3046875 1.0 0 0.0 9 2 Oxidation (M) _LQM(Oxidation (M))KEKTM(Oxidation (M))K_ chr4:87806184-87810606|14|10.21|0.28|5.2|+|1|IBSP,IBSP|1 20.41453444215458 0.284085796332423 6 T{M(Oxidation (M))|F}K 3 -1 35.628 0.0 0.0 3.0514 0.0 0.0 773.402993366189 0.0 773.402993366189 0.0 22.6219429549406 0.0 0.0 0 1.305462187404089 0.0 0.0 0.2396518287104437 T{M(Oxidation (M))|F}K 3.0514 + + 108 + 1 1.538 66850.7 0.5199999809265137 2411 5412 7816 SUDHL4_400M_050219_2,7825 SUDHL4_400M_050219_2,7825,LQMKEKTMK False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 7827 41.729 264.0 238150.0 25 0 14993.0 -1 0 66 910.9132169963588 1819.8118810595167 2 910.9150268435478 MULTI CID FTMS 0 0 0 7826 247645.125 0.858921473492059 1 -0.0132026672363281 1 6 [NP]{I|L}N[HM]REEN{I|L}NP 13 -1 71.957 0.0 0.0 3.9541 0.0 0.0 0.0 258.05126312855595 258.05126312855595 43.54104176961289 0.0 0.0 0.0 0 1.424742501084005 1.0 0.0 0.8494850021680094 [NP]{I|L}N[HM]REEN{I|L}NP 3.9541 - 263 1 1.538 48078.6 1.0 2412 5413 7826 SUDHL4_400M_050219_2,7827 SUDHL4_400M_050219_2,7827, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7828 41.734 315.0 203420.0 25 0 29491.0 39029 TVTIRRQT 8 94 487.7900707648381 973.5655885964762 2 487.7908203005791 MULTI CID FTMS 0 0 0 7826 140711.59375 0.3836385799351163 16 -0.5236396789550781 2 Unmodified _TVTIRRQT_ ENSG00000147481|ENST00000642720|SNTG1;nc|ENSG00000147481|Q9NSN8-2|SNTG1 2.577480529830294 0.808687252328423 6 {I|L} 1 7 10.596 0.0 0.0 1.0884 0.0 0.0 842.4706616939357 0.0 842.4706616939357 0.0 1.966721284914442 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0884 + + 8 + 1 1.538 54305.4 1.0 2413 5413 7826 SUDHL4_400M_050219_2,7828 SUDHL4_400M_050219_2,7828,TVTIRRQT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7830 41.741 150.0 331000.0 25 0 79750.0 + 18909 IAISRTPVL 9 64 485.30822986833226 968.6019068034644 2 485.3083068728447 MULTI CID FTMS 0 0 0 7829 343563.21875 0.8664472207545909 -1 0.0132026672363281 1 Unmodified _LAVWLAALL_ ENSG00000165678|ENST00000372134|GHITM 28.17323086031832 0.1727213568982648 6 {I|L}A{I|L}SV 5 6 66.454 0.0 0.0 6.8608 0.0 0.0 0.0 482.2593477838501 482.2593477838501 52.47425010840047 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 {I|L}A{I|L}SV 6.8608 - 41 + 1 1.538 43016.3 1.0 2414 5414 7829 SUDHL4_400M_050219_2,7830 SUDHL4_400M_050219_2,7830,LAVWLAALL False False IAISRTPVL 41.741247 485.308306872845 2099496.5 7829.0 ENSG00000165678|ENST00000372134|GHITM 0.694604218006134 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7831 41.745 174.0 389260.0 25 0 27616.0 + 20471 LLLAAPAQA 9 109 434.2687610949719 866.5229692567437 2 434.2683593630791 MULTI CID FTMS 0 0 0 7829 283033.875 0.3535726591126623 3 -0.1281013488769531 2 Unmodified _LLLAAPAQA_ ENSG00000196743|ENST00000357164|GM2A 56.541270873467816 0.0279970378729908 6 {I|L}{I|L}AA{I|L}P 6 5 38.421 0.0 0.0 4.434 0.0 0.0 0.0 285.1255442902 285.1255442902 27.001476243306275 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L}AA{I|L}P 4.434 - 245 1 1.538 59417.7 1.0 2415 5414 7829 SUDHL4_400M_050219_2,7831 SUDHL4_400M_050219_2,7831,LLLAAPAQA True True LLLAAPAQA 41.74463 434.268359363079 8486795.0 7829.0 chr5:151253297-151266731|12|14.92|0.5|4.9|+|0|GM2A,GM2A|1;;ENSG00000196743|ENST00000357164|GM2A 4.927682081858317 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7832 41.747 118.0 635670.0 25 0 73957.0 + 14708 IIYQPLLPV 9 94 528.3264610281772 1054.6383691231542 2 528.3269531130791 MULTI CID FTMS 0 0 0 7829 321933.3125 0.6959349560542636 -2 0.083404541015625 3 Unmodified _IIYQPLLPV_ REV__ENST00000598044.1_1_19:50861812-50862477:-|nuORF 30.22481116460888 0.1466181017706357 6 {I|L}{I|L}{I|L}TP 5 -1 45.735 0.0 0.0 4.3366 0.0 0.0 0.0 514.2600802057249 514.2600802057249 33.95253571104335 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 {I|L}{I|L}{I|L}TP 4.3366 - 140 + 1 1.538 62115.6 1.0 2416 5414 7829 SUDHL4_400M_050219_2,7832 SUDHL4_400M_050219_2,7832,IIYQPLLPV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7833 41.752 241.0 231360.0 25 0 16118.0 + 17080 KLEEIIHQI 9 103 561.8297648621283 1121.6449767910565 2 561.8299438357353 MULTI CID FTMS 0 0 0 7829 213087.03125 1.0 0 0.0 4 Unmodified _KLEEIIHQI_ ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1;nc|ENSG00000115839|Q15042-4|RAB3GAP1 38.61474834105838 0.0830609365873449 6 K{I|L}E[KQ]VH{I|L}Q 9 5 + 59.675 0.0 0.0 5.3203 5.3203 78.445 0.0 0.0 0.0 1.989700043360188 12.76679965628567 1.989700043360188 1.989700043360188 0 1.589136830878453 0.0 0.0 0.7742275032520141 K{I|L}E[KQ]VH{I|L}Q;{I|L}KE[KQ]VH{I|L}Q;K{I|L}E[KQ]VH{I|L}GA;{I|L}KE[KQ]VH{I|L}GA;KMK{I|L}[QP]H{I|L}Q;K{I|L}E[KQ]VHAAV;{I|L}KE[KQ]VHAAV;KMK{I|L}H[QP]{I|L}Q;KMK{I|L}[QP]H{I|L}GA;KMH[K{I|L}][QP]{I|L}Q 5.3203;5.1429;4.1821;4.0047;3.7682;3.4059;3.2286;2.6958;2.63;2.275 -;-;-;-;-;-;-;-;-;- 283 + 1 1.538 47564.9 1.0 2417 5414 7829 SUDHL4_400M_050219_2,7833 SUDHL4_400M_050219_2,7833,KLEEIIHQI True True KLEEIIHQI 41.751605 561.829943835735 1044441.0625 7829.0 ENSG00000115839|ENST00000264158|RAB3GAP1;;nc|ENSG00000115839|Q15042-4|RAB3GAP1;;nc|ENSG00000115839|Q15042-3|RAB3GAP1 3.3926488558451333 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7834 41.765 800.0 130170.0 25 0 17232.0 + -1 SLTALIKCI 9 139 509.8037624458528 1017.5929719585056 2 509.8043395876884 MULTI CID FTMS 0 0 0 7829 102858.7265625 0.2176809534346984 -12 0.3904914855957031 5 Carbamidomethyl (C) _SLTALIKC(Carbamidomethyl (C))I_ REV__ENST00000380523.8_1_X:14038468-14044204:-|nuORF;REV__ENST00000398355.7_1_X:14038468-14047965:-|nuORF 4.75600775471527 0.7486543447549536 6 P 1 -1 10.797 0.0 0.0 1.061 0.0 0.0 411.2890911985432 506.21726404361567 917.5063552421587 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 P 1.061 - 60 + 1 1.538 81259.9 0.4799999892711639 2418 5414 7829 SUDHL4_400M_050219_2,7834 SUDHL4_400M_050219_2,7834,SLTALIKCI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7835 41.771 294.0 217560.0 25 0 18184.0 + 1330 AKAPLFLHL 9 97 505.3112520184381 1008.607951103676 2 505.3120910525322 MULTI CID FTMS 0 0 0 7829 101445.6640625 0.8082595310181359 1 -0.05023193359375 6 Unmodified _AKAPLFLHL_ REV__ENST00000257177.8_1_1:52940808-52940859:-|nuORF 23.1484247019978 0.2366544122328345 6 {I|L}VH{I|L} 4 -1 37.805 0.0 0.0 3.7483 0.0 0.0 528.3025990216812 0.0 528.3025990216812 0.0 17.25895023531386 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 {I|L}VH{I|L} 3.7483 - 67 1 1.538 55352.2 1.0 2419 5414 7829 SUDHL4_400M_050219_2,7835 SUDHL4_400M_050219_2,7835,AKAPLFLHL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7836 41.785 800.0 177850.0 25 0 15003.0 -1 0 132 583.2720515189883 1746.7943251571646 3 583.9397460818291 MULTI CID FTMS 0 0 0 7829 92282.78125 0.7252137509345905 -1 0.0132026672363281 7 6 {I|L}Q 2 -1 24.421 0.0 0.0 1.3981 0.0 0.0 1487.6406824343114 0.0 1487.6406824343114 0.0 6.373922795270801 0.0 0.0 0 0.0 0.0 0.0 0.6462566630072955 {I|L}Q 1.3981 - 1607 + 1 1.538 112630.2 0.4900000095367431 2420 5414 7829 SUDHL4_400M_050219_2,7836 SUDHL4_400M_050219_2,7836, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7838 41.789 74.0 560380.0 25 0 103590.0 + 38548 TSSKKSGL 8 68 404.2329155607814 806.4512781883628 2 404.2327758669853 MULTI CID FTMS 0 0 0 7837 685670.4375 0.6843667189004946 2 -0.0778694152832031 1 Unmodified _TSSKKSGL_ REV__ENST00000511058.1_1_3:123385915-123401122:-|nuORF 4.3292370932331545 0.7980541185046766 6 C 1 -1 1.5938 0.0 0.0 0.19763 0.0 0.0 421.2615026530097 279.1484469049438 700.4099495579535 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.19763 - 1 + 1 1.538 39148.4 1.0 2421 5415 7837 SUDHL4_400M_050219_2,7838 SUDHL4_400M_050219_2,7838,TSSKKSGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7839 41.793 155.0 326340.0 25 0 30974.0 + 33534 SILEHQIQV 9 89 533.7981254596042 1065.5816979860083 2 533.7982665896416 MULTI CID FTMS 0 0 0 7837 201651.0 0.040920046096462 10 -0.3186492919921875 2 Unmodified _SILEHQIQV_ ENSG00000104738|ENST00000649973|MCM4 30.63653989081413 0.1413794767160703 6 {[TV]|[{I|L}S]}[YR]TS{I|L}QV 9 4 + 35.963 0.0 0.0 3.375 3.375 84.353 0.0 0.0 0.0 1.45673640140118 16.55841552005655 1.45673640140118 35.96333090686536 0 0.4049471895720985 2.0 0.2302046884880938 0.0 {[TV]|[{I|L}S]}[YR]TS{I|L}QV 3.375 - 129 1 1.538 42638.0 1.0 2422 5415 7837 SUDHL4_400M_050219_2,7839 SUDHL4_400M_050219_2,7839,SILEHQIQV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7840 41.795 101.0 391670.0 25 0 73720.0 34450 SLYHKIQL 8 67 501.2904592618345 1000.566365590469 2 501.2906066775322 MULTI CID FTMS 0 0 0 7837 425016.03125 0.4173632585413852 -11 0.3737640380859375 3 Unmodified _SLYHKIQL_ ENSG00000132793|ENST00000373257|LPIN3;ENST00000496565.5_1_20:39985772-39986924:+|nuORF;nc|ENSG00000132793|Q9BQK8-2|LPIN3 2.577480529830294 0.808687252328423 6 {M(Oxidation (M))|F} 1 8 10.837 0.0 0.0 1.0831 0.0 0.0 835.4869111000378 0.0 835.4869111000378 0.0 0.7488116016666613 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0831 - 2 + 1 1.538 34675.2 1.0 2423 5415 7837 SUDHL4_400M_050219_2,7840 SUDHL4_400M_050219_2,7840,SLYHKIQL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7841 41.797 97.0 495450.0 25 0 45772.0 + 12565 GVIDGHIYAV 10 81 522.2790856363165 1042.543618339433 2 522.2795287966728 MULTI CID FTMS 0 0 0 7837 415872.625 1.0 0 0.0 4 Unmodified _GVIDGHIYAV_ ENSG00000079999|ENST00000171111|KEAP1 25.399314129420983 0.3980215340001851 6 [VG]{I|L}[HT]{I|L}{I|L}D 8 5 39.232 0.0 0.0 3.7631 0.0 0.0 0.0 191.0572451227172 191.0572451227172 23.03395642852614 0.0 0.0 0.0 0 0.6747425010840047 2.0 0.0 0.0 [VG]{I|L}[HT]{I|L}{I|L}D 3.7631 - 272 + 1 1.538 44572.0 1.0 2424 5415 7837 SUDHL4_400M_050219_2,7841 SUDHL4_400M_050219_2,7841,GVIDGHIYAV False True GVIDGHIYAV 41.796797 522.279528796673 1874766.875 7837.0 ENSG00000079999|ENST00000171111|KEAP1 4.87510101000468 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7842 41.799 124.0 572180.0 25 0 57794.0 + 1603 ALLKVNQEL 9 107 514.3109807386478 1026.6074085440955 2 514.3111450076103 MULTI CID FTMS 0 0 0 7837 363142.8125 0.5239847909376181 -2 0.0634346008300781 5 Unmodified _ALLKVNQEL_ ENSG00000100347|ENST00000350028|SAMM50;ENST00000474323.5_1_22:44371844-44392260:+|nuORF 54.773552608820026 0.0299037012502309 6 [{I|L}A]{I|L}{M(Oxidation (M))|F}[{I|L}V]Q 7 4 45.762 0.0 0.0 4.4576 0.0 0.0 0.0 239.10393701724848 239.10393701724848 25.712885221980105 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.7742275032520141 [{I|L}A]{I|L}{M(Oxidation (M))|F}[{I|L}V]Q 4.4576 - 266 + 1 1.538 60566.9 1.0 2425 5415 7837 SUDHL4_400M_050219_2,7842 SUDHL4_400M_050219_2,7842,ALLKVNQEL True True ALLKVNQEL 41.799357 514.31114500761 3204377.25 7837.0 ENST00000474323.5_1_22:44371844-44392260:+|nuORF;;ENSG00000100347|ENST00000350028|SAMM50 5.13571564356486 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7843 41.802 112.0 407460.0 25 0 25540.0 + 44213 YLGNINPQM 9 86 533.2550952101623 1064.4956374871244 2 533.2556030154228 MULTI CID FTMS 0 0 0 7837 233460.90625 0.2756431452873031 -4 0.1813583374023437 6 Oxidation (M) _YLGNINPQM(Oxidation (M))_ ENSG00000163714|ENST00000473835|U2SURP;ENST00000461591.5_1_3:142720470-142741912:+|nuORF;nc|ENSG00000163714|O15042-2|U2SURP 57.47134341890925 0.0274820932774257 6 [Y{I|L}][NG]{I|L}NPQ{M(Oxidation (M))|F} 9 0 [Y{I|L}][NG]{I|L} + + 33.95 18.869 3.3677 3.1893 3.1893 51.933 0.0 0.0 0.0 0.0 1.9384043593829008 0.0 0.0 0 0.805462187404089 0.0 0.0 0.7134679910804405 + + [Y{I|L}][NG]{I|L}NPQ{M(Oxidation (M))|F} 3.1893 + + 216 + 1 1.538 42337.4 1.0 2426 5415 7837 SUDHL4_400M_050219_2,7843 SUDHL4_400M_050219_2,7843,YLGNINPQM True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7844 41.806 234.0 245270.0 25 0 32324.0 + -1 KSVDPTLAL 9 81 472.2753330723413 942.5361132114826 2 472.2765685915947 MULTI CID FTMS 0 0 0 7837 161591.53125 0.1640158703313515 -5 0.1889457702636718 7 Carbamidomethyl (C) _TPLC(Carbamidomethyl (C))RLAL_ ENSG00000141367|ENST00000269122|CLTC;nc|ENSG00000141367|Q00610-2|CLTC 30.22481116460888 0.4082965392918993 6 {[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[TP]{I|L}A{I|L} 9 -1 {[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[TP]{I|L} + + 22.959 -5.5353 -0.7476 2.4359 2.4359 50.837 0.0 0.0 0.0 0.0 13.62649471529184 0.0 0.0 0 0.5 0.0 0.0 0.0 {[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[TP]{I|L}A{I|L} 2.4359 - 53 + 1 1.538 52278.3 1.0 2427 5415 7837 SUDHL4_400M_050219_2,7844 SUDHL4_400M_050219_2,7844,TPLCRLAL False False KSVDPTLAL 41.806105 472.276568591595 10404671.0 7837.0 ENSG00000141367|ENST00000269122|CLTC;;nc|ENSG00000141367|Q00610-2|CLTC 2.083691120147705 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7845 41.82 800.0 132440.0 25 0 24689.0 + 14924 ILMDPSPEYA 10 121 576.2677095518194 1150.5208661704387 2 576.2679321169853 MULTI CID FTMS 0 0 0 7837 142207.890625 1.0 0 0.0 8 Oxidation (M) _ILM(Oxidation (M))DPSPEYA_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 46.020951573049366 0.1035046897853725 6 [EP]YVPS[EP]YA 10 4 + 51.916 0.0 0.0 4.5124 4.5124 74.753 0.0 0.0 0.0 1.4928876664371415 14.30400924012389 1.4928876664371415 1.4928876664371415 0 1.048455006504028 1.3979400086720375 1.079689690656103 0.0 [EP]YVPS[EP]YA;{I|L}{I|L}{M(Oxidation (M))|F}DPS[EP]YA;[EP]SP[YV][EP]YA;[EP]SPD{M(Oxidation (M))|F}{I|L}{I|L}YA;[EP]YVPE[PS]YA;{I|L}{I|L}{M(Oxidation (M))|F}DPE[PS]YA;{[{M(Oxidation (M))|F}D]|MM}{I|L}{I|L}PS[EP]YA;[PS]EP[YV][EP]YA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}DPS[EP]YA;[{M(Oxidation (M))|F}V]E{I|L}PS[EP]YA 4.5124;4.3827;4.1774;3.6764;3.5124;3.3827;2.9902;2.7056;2.6841;2.5755 -;+;-;-;-;-;-;-;-;- + 606 1 1.538 84510.5 0.6100000143051147 2428 5415 7837 SUDHL4_400M_050219_2,7845 SUDHL4_400M_050219_2,7845,ILMDPSPEYA True False ILMDPSPEYA 41.819936 576.267932116985 874402.4375 7837.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 6.457495212554932 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7846 41.825 261.0 225190.0 25 0 26662.0 + 44209 YLGEQIQKL 9 92 546.3072896395316 1090.6000263458632 2 546.3088867068291 MULTI CID FTMS 0 0 0 7837 115167.1015625 0.7341316021544981 -2 0.0634346008300781 9 Unmodified _YLGEQIQKL_ ENSG00000135775|ENST00000366669|COG2;nc|ENSG00000135775|Q14746-2|COG2 47.74868867922204 0.0453060283459952 6 Y{I|L}WQ{I|L}QK{I|L} 8 2 + 68.938 0.0 0.0 6.3211 6.3211 85.052 0.0 0.0 0.0 56.71958169952731 4.323806533759438 4.323806533759438 5.014712847550761 0 0.6549471895720985 2.0 0.0 0.805462187404089 Y{I|L}WQ{I|L}QK{I|L};Y{I|L}{[DA]|[EG]}Q{I|L}QK{I|L};Y{I|L}WQ{I|L}[AG]K{I|L};Y{I|L}W[AG]{I|L}QK{I|L};Y{I|L}{[DA]|[EG]}Q{I|L}[AG]K{I|L};Y{I|L}{[DA]|[EG]}[AG]{I|L}QK{I|L};Y{I|L}W[AG]{I|L}[AG]K{I|L} 6.3211;5.8613;5.4718;5.4718;5.017;5.017;4.6275 -;+;-;-;-;-;- + 171 + 1 1.538 48916.5 1.0 2429 5415 7837 SUDHL4_400M_050219_2,7846 SUDHL4_400M_050219_2,7846,YLGEQIQKL True True YLGEQIQKL 41.824782 546.308886706829 825066.3125 7837.0 nc|ENSG00000135775|Q14746-2|COG2;;ENSG00000135775|ENST00000366669|COG2 5.855658054351807 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7848 41.832 172.0 337800.0 25 0 66402.0 + -1 APPKVSAL 8 79 412.7464469154773 823.4783408977545 2 412.7460510134697 MULTI CID FTMS 0 0 0 7847 275826.40625 0.4452737877015789 4 -0.127166748046875 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))APPKVSAL_ REV__ENST00000344458.6_1_2:220414823-220415117:+|nuORF 0.7936320650641473 0.8195151834710337 6 Q 1 -1 4.6041 0.0 0.0 0.5591 0.0 0.0 301.22164031357323 391.1861971490844 692.4078374626577 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.5591 - 1 + 1 1.538 48828.8 1.0 2430 5416 7847 SUDHL4_400M_050219_2,7848 SUDHL4_400M_050219_2,7848,APPKVSAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7849 41.834 65.0 707510.0 25 0 108800.0 + -1 VGMFIFIL 8 75 478.2704281908084 954.5263034484168 2 478.2742797732353 MULTI CID FTMS 0 0 0 7847 648577.0 0.8512412652720851 -4 0.1737785339355468 2 Oxidation (M) _VGM(Oxidation (M))FIFIL_ REV__ENSG00000115616|ENST00000233969|SLC9A2;REV__ENSG00000180251|ENST00000295269|SLC9A4 17.086550045450526 0.6584923310065985 6 {I|L}K{I|L}{I|L} 4 -1 29.553 0.0 0.0 3.096 0.0 0.0 469.1798573224625 0.0 469.1798573224625 0.0 13.354706403678875 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}K{I|L}{I|L} 3.096 - 44 1 1.538 39129.7 1.0 2431 5416 7847 SUDHL4_400M_050219_2,7849 SUDHL4_400M_050219_2,7849,VGMFIFIL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7850 41.841 418.0 213740.0 25 0 11142.0 + 44212 YLGNINPQM 9 118 525.2574186093531 1048.500284285506 2 525.2579833865166 MULTI CID FTMS 0 0 0 7847 136610.765625 0.5282743856901515 -5 0.2215003967285156 3 Unmodified _YLGNINPQM_ ENSG00000163714|ENST00000473835|U2SURP;ENST00000461591.5_1_3:142720470-142741912:+|nuORF;nc|ENSG00000163714|O15042-2|U2SURP 50.855029805455786 0.0384952370514206 6 [Y{I|L}]NG{I|L}N 6 5 38.123 0.0 0.0 3.6359 0.0 0.0 0.0 371.1407932381358 371.1407932381358 19.834106490399247 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.6747425010840047 [Y{I|L}]NG{I|L}N 3.6359 - 594 1 1.538 76284.4 1.0 2432 5416 7847 SUDHL4_400M_050219_2,7850 SUDHL4_400M_050219_2,7850,YLGNINPQM True True YLGNINPQM 41.841011 525.257983386517 1426611.375 7847.0 ENSG00000163714|ENST00000473835|U2SURP;;ENST00000461591.5_1_3:142720470-142741912:+|nuORF;;nc|ENSG00000163714|O15042-2|U2SURP 5.930815060933431 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7851 41.849 431.0 206550.0 25 0 25299.0 + 16516 KAPLTLAA 8 122 392.7486454145605 783.4827378959211 2 392.7482787966728 MULTI CID FTMS 0 0 0 7847 105633.234375 0.0479630557179424 -6 0.2290878295898437 4 Unmodified _KAPLTLAA_ REV__ENST00000416447.1_1_21:42742154-42742199:+|nuORF 5.230669730166228 0.792582437072536 6 {M(Oxidation (M))|F} 1 -1 10.181 0.0 0.0 1.2995 0.0 0.0 618.4031765939665 0.0 618.4031765939665 0.0 3.1913608199120347 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2995 - 10 + 1 1.538 76385.0 1.0 2433 5416 7847 SUDHL4_400M_050219_2,7851 SUDHL4_400M_050219_2,7851,KAPLTLAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7852 41.863 800.0 93608.0 25 0 7855.5 -1 0 74 769.692801052493 2306.056573757679 3 769.6947509646416 MULTI CID FTMS 0 0 0 7847 93662.15625 0.8400700771024707 -1 0.0401420593261718 5 6 {I|L}D{[{M(Oxidation (M))|F}H]|[RQ]}{[WN]|[YH]}{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 11 -1 39.736 0.0 0.0 1.7231 0.0 0.0 908.450487205275 0.0 908.450487205275 0.0 26.88812003329869 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.4247425010840047 {I|L}D{[{M(Oxidation (M))|F}H]|[RQ]}{[WN]|[YH]}{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 1.7231 - 187 1 1.538 65282.6 0.4600000083446502 2434 5416 7847 SUDHL4_400M_050219_2,7852 SUDHL4_400M_050219_2,7852, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7854 41.867 11.0 4380200.0 25 0 356750.0 + 43547 WWWWIWWQWW 10 55 874.9028227946941 1747.791092656188 2 874.9051391482353 MULTI CID FTMS 0 0 0 7853 4542945.0 0.7577906972767995 2 -0.0687332153320312 1 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 8 54.627 0.0 0.0 3.1255 0.0 0.0 734.363573142775 0.0 734.363573142775 0.0 37.59250301305293 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.8494850021680094 QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.1255 - 120 1 1.538 37714.0 1.0 2435 5417 7853 SUDHL4_400M_050219_2,7854 SUDHL4_400M_050219_2,7854,WWWWIWWQWW False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 7855 41.869 96.0 468540.0 25 0 74472.0 + -1 VLELQVVVM 9 75 523.3031553536141 1044.591757774028 2 523.3037597537041 MULTI CID FTMS 0 0 0 7853 333278.875 0.8268680936348536 -1 0.0377273559570312 2 Oxidation (M) _VLELQVVVM(Oxidation (M))_ REV__ENST00000263934.10_1_1:10437581-10437845:+|nuORF 2.302733041254933 0.8342969208511092 6 SY 2 -1 13.188 0.0 0.0 1.2625 0.0 0.0 776.4861192015657 0.0 776.4861192015657 0.0 3.272754322738028 0.0 0.0 0 0.0 0.0 0.0 0.0 SY 1.2625 - 7 + 1 1.538 41247.6 1.0 2436 5417 7853 SUDHL4_400M_050219_2,7855 SUDHL4_400M_050219_2,7855,VLELQVVVM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7856 41.871 94.0 611040.0 25 0 120280.0 + 42981 VVTPLPAA 8 63 384.23547859210026 766.4564042510005 2 384.2354308962822 MULTI CID FTMS 0 0 0 7853 709267.4375 0.1529282946181452 -5 0.2115058898925781 3 Unmodified _VVTPLPAA_ REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF 0.0 0.8243325171867699 6 P 1 -1 3.9794 0.0 0.0 0.51919 0.0 0.0 590.3514065476787 76.02488886051015 666.3762954081889 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.51919 + + 1 + 1 1.538 49264.0 1.0 2437 5417 7853 SUDHL4_400M_050219_2,7856 SUDHL4_400M_050219_2,7856,VVTPLPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7857 41.875 192.0 289900.0 25 0 23992.0 -1 0 60 881.9112861213086 1761.8080193094172 2 882.4136230349541 MULTI CID FTMS 0 0 0 7853 318537.40625 0.110939841358984 -5 0.2115058898925781 4 6 V{I|L}QAEN{I|L}DP{[QN]|[E{I|L}]|[KN]} 11 -1 73.831 0.0 0.0 4.1907 0.0 0.0 522.23344618965 0.0 522.23344618965 0.0 53.88290452274365 0.0 0.0 0 0.4247425010840047 0.0 0.0 1.1861818737241734 V{I|L}QAEN{I|L}DP{[QN]|[E{I|L}]|[KN]} 4.1907 - 391 1 1.538 44788.7 1.0 2438 5417 7853 SUDHL4_400M_050219_2,7857 SUDHL4_400M_050219_2,7857, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7858 41.887 660.0 185620.0 25 0 14535.0 + -1 RAMEGELGEL 10 150 560.7682547314063 1119.5219565296125 2 560.7678100466728 MULTI CID FTMS 0 0 0 7853 115321.3359375 0.2674082861666814 -5 0.2115058898925781 5 Oxidation (M) _RAM(Oxidation (M))EGELGEL_ ENSG00000244045|ENST00000292114|TMEM199 35.61225514009592 0.2039006631696762 6 {[DA]|[EG]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}W{I|L}GE{I|L} 10 -1 + 71.164 0.0 0.0 6.3566 6.3566 87.136 0.0 0.0 0.0 10.145901927462582 12.74227503252014 10.145901927462582 7.658715643802765 0 0.6109243748081782 1.3979400086720375 0.566901560044258 0.0 {[DA]|[EG]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}W{I|L}GE{I|L};{[DA]|[EG]}{I|L}{[CT]|[{M(Oxidation (M))|F}G]}GE{I|L}W{I|L};{[QN]|[E{I|L}]|[KN]}G{[CT]|[{M(Oxidation (M))|F}G]}GE{I|L}GE{I|L};{[DA]|[EG]}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E{I|L}W{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{[CT]|[{M(Oxidation (M))|F}G]}GE{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}G{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}G{[CT]|[{M(Oxidation (M))|F}G]}W{I|L}GE{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}GE{I|L}GE{I|L};{NN|[MP]|[D{I|L}]|[EV]}A{[CT]|[{M(Oxidation (M))|F}G]}W{I|L}GE{I|L} 6.3566;5.6725;5.4503;5.3579;5.2014;5.1319;5.1079;4.8829;4.863;4.8589 -;-;-;-;-;-;-;-;-;- 3154 1 1.538 94677.0 1.0 2439 5417 7853 SUDHL4_400M_050219_2,7858 SUDHL4_400M_050219_2,7858,RAMEGELGEL False False RAMEGELGEL 41.886665 560.767810046673 1918319.5 7853.0 ENSG00000244045|ENST00000292114|TMEM199 4.2562094529469805 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7860 41.891 81.0 724360.0 25 0 116330.0 + 10512 FVDDYTVRV 9 56 557.2824474005594 1112.5503418679186 2 557.2825805544853 MULTI CID FTMS 0 0 0 7859 542502.5625 0.3622788450438026 3 -0.1036720275878906 1 Unmodified _FVDDYTVRV_ ENSG00000115233|ENST00000409682|PSMD14 41.95555342248728 0.0647214845423414 6 {M(Oxidation (M))|F}VDDYTV[RV] 9 0 + 68.906 0.0 0.0 6.1935 6.1935 91.863 0.0 0.0 0.0 56.07509072285026 9.44968960007344 9.44968960007344 17.501225267834002 0 0.9247425010840048 0.0 0.4247425010840047 0.3807196863200844 + + {M(Oxidation (M))|F}VDDYTV[RV];{M(Oxidation (M))|F}VDDV[YT][RV];{M(Oxidation (M))|F}VDVD[YT][RV];{M(Oxidation (M))|F}VVDD[YT][RV] 6.1935;4.6204;4.3499;3.9721 +;-;-;- + 114 + 1 1.538 52258.0 1.0 2440 5418 7859 SUDHL4_400M_050219_2,7860 SUDHL4_400M_050219_2,7860,FVDDYTVRV True True FVDDYTVRV 41.891461 557.282580554485 14451861.0 7859.0 ENSG00000115233|ENST00000409682|PSMD14 5.696781237920125 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7861 41.905 800.0 187390.0 25 0 32035.0 + 37651 TLLSLRPSEA 10 123 543.8115754810625 1085.608598028925 2 543.8115112185478 MULTI CID FTMS 0 0 0 7859 140464.484375 0.8608835116456944 -2 0.0618934631347656 2 Unmodified _TLLSLRPSEA_ ENSG00000163273|ENST00000409852|NPPC 78.06048673739656 0.0186573233964999 6 T{I|L}{I|L}S{I|L}R 6 4 87.74 0.0 0.0 8.0821 0.0 0.0 0.0 399.1511019342407 399.1511019342407 70.78508689054182 0.0 0.0 0.0 0 1.5994850021680094 2.0 0.7742275032520141 0.5866968715561641 + T{I|L}{I|L}S{I|L}R 8.0821 + + 1193 + 1 1.538 117700.5 0.5400000214576721 2441 5418 7859 SUDHL4_400M_050219_2,7861 SUDHL4_400M_050219_2,7861,TLLSLRPSEA True True TLLSLRPSEA 41.905296 543.811511218548 983004.3125 7859.0 ENSG00000163273|ENST00000409852|NPPC 6.55003293355306 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7862 41.919 800.0 116610.0 25 0 20306.0 23501 LTKAVVLA 8 128 407.7732812879426 813.5320096426852 2 407.7734863162041 MULTI CID FTMS 0 0 0 7859 113531.4765625 1.0 0 0.0 3 Unmodified _LTKAVVLA_ ENSG00000158246|ENST00000289166|TENT5B 30.22481116460888 0.4082965392918993 6 V{I|L}T{I|L}A 5 5 23.984 0.0 0.0 2.9482 0.0 0.0 298.20005995918126 0.0 298.20005995918126 0.0 8.499934467764874 0.0 0.0 0 0.8182503180159344 0.0 0.5 0.0 V{I|L}T{I|L}A 2.9482 - 80 1 1.538 73667.7 0.4399999976158142 2442 5418 7859 SUDHL4_400M_050219_2,7862 SUDHL4_400M_050219_2,7862,LTKAVVLA False True KAVVLTLA 41.919111 407.773486316204 516024.84375 7859.0 ENSG00000110244|ENST00000357780|APOA4;;P15497 1.2155219713846843 2.0 False 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7863 41.922 164.0 457810.0 25 0 59110.0 -1 0 105 377.2171663335743 376.2098898669743 1 377.2170287966728 MULTI CID FTMS 0 0 0 7859 296974.53125 0.2457778906310454 -7 0.2833938598632812 4 6 Y 1 -1 1.1092 0.0 0.0 0.29485 0.0 0.0 134.09421101130863 76.02484308414296 210.1190540954516 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.29485 - 4 + 1 1.538 64867.0 1.0 2443 5418 7859 SUDHL4_400M_050219_2,7863 SUDHL4_400M_050219_2,7863, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7864 41.931 505.0 239650.0 25 0 36232.0 + 42662 VTVPPGPSL 9 150 433.75272576377824 0 433.7528259158134 PEAK CID FTMS 0 0 0 7859 100071.703125 0.0226490272196749 89 -3.173309326171875 5 Unmodified _VTVPPGPSL_ ENSG00000159352|ENST00000368884|PSMD4;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;nc|ENSG00000180764|A2A3N6|PIPSL 39.957323273325 0.0619271662220897 6 E 1 9 5.7969 0.0 0.0 0.66978 0.0 0.0 665.3746093871284 68.05130945377186 733.4259188409003 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 E 0.66978 - 37 + 1 1.538 96651.0 1.0 2444 5418 7859 SUDHL4_400M_050219_2,7864 SUDHL4_400M_050219_2,7864,VTVPPGPSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7866 41.936 52.0 490560.0 25 0 42250.0 + + 32143 AERKPSVTV 9 60 493.7818362811986 985.5491196291972 2 494.2825500369072 MULTI CID FTMS 0 0 0 7865 596275.0 0.770231742841868 -3 0.1064605712890625 1 Unmodified _RVPQRMTV_ ENST00000463668.1_1_21:37623532-37623580:+|nuORF 9.347437153973935 0.7675937258251505 6 TV 2 -1 17.536 0.0 0.0 1.7793 0.0 0.0 767.4223476338832 0.0 767.4223476338832 0.0 6.115935501943092 0.0 0.0 0 0.3807196863200844 0.0 0.3807196863200844 0.0 TV 1.7793 + + 25 + 1 1.538 28025.5 1.0 2445 5419 7865 SUDHL4_400M_050219_2,7866 SUDHL4_400M_050219_2,7866,RVPQRMTV False False AERKPSVTV 41.93645 494.282550036907 3706436.25 7865.0 ENST00000463668.1_1_21:37623532-37623580:+|nuORF 2.3021840254465737 2.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7867 41.941 223.0 197550.0 25 0 21957.0 + 10432 FTDQLASLV 9 72 497.2660960711856 992.5176392091712 2 497.2664062380791 MULTI CID FTMS 0 0 0 7865 111211.4453125 0.1557318261843397 4 -0.1294288635253906 2 Unmodified _FTDQLASLV_ REV__nc|ENSG00000111913|Q9Y4F9|RIPOR2 37.97399986684836 0.0865783450051559 6 ADET 4 -1 29.865 0.0 0.0 3.009 0.0 0.0 558.3386097638687 0.0 558.3386097638687 0.0 9.51036548887494 0.0 0.0 0 1.242992819099939 0.0 0.4247425010840047 0.0 ADET 3.009 - 138 1 1.538 38852.1 1.0 2446 5419 7865 SUDHL4_400M_050219_2,7867 SUDHL4_400M_050219_2,7867,FTDQLASLV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7868 41.945 239.0 261480.0 25 0 53606.0 42641 VTVLKPPL 8 84 433.7878358682805 865.5611188033611 2 433.7874633669853 MULTI CID FTMS 0 0 0 7865 121941.3125 0.4468720961952012 -4 0.1466026306152343 3 Unmodified _VTVLKPPL_ ENST00000334126.11_1_11:73724306-73724423:-|nuORF 5.760428011301431 0.7893668129297577 6 {I|L} 1 7 11.259 0.0 0.0 1.3008 0.0 0.0 734.4662071596096 0.0 734.4662071596096 0.0 0.9814732257198422 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.3008 + + 30 + 1 1.538 55344.6 1.0 2447 5419 7865 SUDHL4_400M_050219_2,7868 SUDHL4_400M_050219_2,7868,VTVLKPPL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7869 41.952 380.0 201310.0 25 0 26458.0 + -1 SMLPTLREA 9 102 517.2707912919403 1032.5270296506806 2 517.2714111208916 MULTI CID FTMS 0 0 0 7865 113736.796875 0.6536254743824498 -3 0.1064605712890625 4 Oxidation (M) _SM(Oxidation (M))LPTLREA_ ENSG00000034693|ENST00000367591|PEX3 23.78978130925829 0.2284941198415988 6 {I|L}TP{I|L}{[ES]|[DT]|[{I|L}C]} 6 -1 32.128 0.0 0.0 3.1116 0.0 0.0 374.1926136701188 0.0 374.1926136701188 0.0 21.414412723804546 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 {I|L}TP{I|L}{[ES]|[DT]|[{I|L}C]} 3.1116 - 108 1 1.538 63521.1 1.0 2448 5419 7865 SUDHL4_400M_050219_2,7869 SUDHL4_400M_050219_2,7869,SMLPTLREA False False SMLPTLREA 41.951944 517.271411120892 1150883.75 7865.0 ENSG00000034693|ENST00000367591|PEX3 5.684621413548787 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7871 41.968 800.0 84481.0 25 0 6786.0 + -1 MWNKIRRFYTQ 11 97 779.9015976874447 1557.7886424416893 2 779.9015380740166 MULTI CID FTMS 0 0 0 7870 70332.2421875 0.7305003447805227 1 -0.0383987426757812 1 Oxidation (M) _M(Oxidation (M))WNKIRRFYTQ_ REV__ENSG00000134343|ENST00000256737|ANO3;REV__nc|ENSG00000134343|Q9BYT9-2|ANO3 2.9952420565917617 0.861016188266951 6 {[QS]|[NT]}SVH[Q{I|L}][{M(Oxidation (M))|F}V]STN[{I|L}V] 14 -1 + 66.569 0.0 0.0 4.2733 4.2733 80.065 0.0 0.0 0.0 19.31744089003304 39.89835314637703 19.31744089003304 7.174617874626037 0 0.7742275032520141 0.8860566476931632 2.337180496500464 0.3494850021680094 {[QS]|[NT]}SVH[Q{I|L}][{M(Oxidation (M))|F}V]STN[{I|L}V];{[QS]|[NT]}VSH[Q{I|L}][{M(Oxidation (M))|F}V]STN[{I|L}V];{[QS]|[NT]}SVH[K{I|L}][MD]STN[{I|L}V];{[QS]|[NT]}SVH[Q{I|L}][W{M(Oxidation (M))|F}]TN[{I|L}V];{[QS]|[NT]}VSH[K{I|L}][MD]STN[{I|L}V];{[QS]|[NT]}SVH[K{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}DTN[{I|L}V];[KG]ESH[Q{I|L}][{M(Oxidation (M))|F}V]STN[{I|L}V];{[QS]|[NT]}VSH[Q{I|L}][W{M(Oxidation (M))|F}]TN[{I|L}V];{[NV]|[RG]}TSH[Q{I|L}][{M(Oxidation (M))|F}V]STN[{I|L}V];{[QS]|[NT]}VSH[K{I|L}]{[MS]|[{M(Oxidation (M))|F}A]}DTN[{I|L}V] 4.2733;3.8127;3.8074;3.3482;3.3468;3.0041;2.9848;2.8877;2.7523;2.5435 -;-;-;-;-;-;-;-;-;- 832 1 1.538 49642.6 0.4600000083446502 2449 5420 7870 SUDHL4_400M_050219_2,7871 SUDHL4_400M_050219_2,7871,MWNKIRRFYTQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7872 41.98 682.0 192890.0 25 0 23451.0 + 40049 VGGIKLKS 8 147 401.2624580583821 800.5103631835642 2 401.2618896365166 MULTI CID FTMS 0 0 0 7870 148337.875 0.5486746387729637 -2 0.0652732849121093 2 Unmodified _VGGIKLKS_ REV__ENSG00000163867|ENST00000357182|ZMYM6;REV__ENST00000493328.5_1_1:35480755-35496240:-|nuORF;REV__nc|ENSG00000163867|O95789-1|ZMYM6;REV__nc|ENSG00000163867|O95789-2|ZMYM6;REV__nc|ENSG00000163867|O95789-4|ZMYM6 0.7936320650641473 0.8195151834710337 6 P 1 -1 8.2103 0.0 0.0 1.0256 0.0 0.0 685.4465870988947 0.0 685.4465870988947 0.0 6.220625721637543 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.0256 - 12 + 1 1.538 105503.2 1.0 2450 5420 7870 SUDHL4_400M_050219_2,7872 SUDHL4_400M_050219_2,7872,VGGIKLKS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7873 41.99 579.0 222240.0 25 0 24334.0 + 30382 RAMEGELGEL 10 131 552.7708938993367 1103.5272348654732 2 552.7719604372978 MULTI CID FTMS 0 0 0 7870 91697.7421875 0.7523059389573459 -1 0.0207061767578125 3 Unmodified _RAMEGELGEL_ ENSG00000244045|ENST00000292114|TMEM199 57.24910588100465 0.0438022649904578 6 {[QN]|[E{I|L}]|[KN]}MNGE{I|L}GE{I|L} 10 3 + 80.239 0.0 0.0 7.2711 7.2711 81.414 0.0 0.0 0.0 4.316945415383231 16.53212513775344 4.316945415383231 0.3696049341811829 0 1.5172203223519531 1.0 0.7926740567922438 0.3494850021680094 {[QN]|[E{I|L}]|[KN]}MNGE{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}G{[MG]|[TS]}GE{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}MNW{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}G{[MG]|[TS]}W{I|L}GE{I|L};{[DA]|[EG]}{I|L}{[MG]|[TS]}GE{I|L}GE{I|L};{[DA]|[EG]}{I|L}{[MG]|[TS]}W{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}GA{[CA]|SS}E{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}G[MN]E{I|L}GE{I|L};{[DA]|[EG]}{I|L}[MN]E{I|L}GE{I|L};{[QN]|[E{I|L}]|[KN]}Q{[CA]|SS}E{I|L}GE{I|L} 7.2711;7.2376;7.1116;7.0741;6.8799;6.7164;6.6921;6.6418;6.6008;6.369 -;-;-;-;-;-;-;-;-;- 3079 1 1.538 102204.6 1.0 2451 5420 7870 SUDHL4_400M_050219_2,7873 SUDHL4_400M_050219_2,7873,RAMEGELGEL True True RAMEGELGEL 41.990342 552.771960437298 672639.8125 7870.0 ENSG00000244045|ENST00000292114|TMEM199 2.3166621128718057 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7875 42.0 332.0 164350.0 25 0 21565.0 -1 PVLMVISH 8 83 456.2566283544109 910.4987037756218 2 456.2567016482353 MULTI CID FTMS 0 0 0 7874 122904.0234375 0.379754072677923 -12 0.4110260009765625 1 Oxidation (M) _PVLM(Oxidation (M))VISH_ ENSG00000196562|ENST00000688720|SULF2;ENST00000463221.2_1_20:46318868-46386107:-|nuORF;nc|ENSG00000196562|Q8IWU5-2|SULF2 2.889219685676258 0.8067950007271085 6 T 1 -1 0.9691 0.0 0.0 0.10644 0.0 0.0 626.3874499687844 180.04348169498283 806.4309316637672 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.10644 - 15 + 1 1.538 48414.1 1.0 2452 5421 7874 SUDHL4_400M_050219_2,7875 SUDHL4_400M_050219_2,7875,PVLMVISH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7876 42.005 280.0 318050.0 25 0 35383.0 + 17237 KLLPENNVL 9 103 520.3107154788775 1038.6068780245548 2 520.3115722537041 MULTI CID FTMS 0 0 0 7874 126538.46875 0.6356974045746879 -1 0.0383987426757812 2 Unmodified _KLLPENNVL_ ENSG00000141510|ENST00000269305|TP53;nc|ENSG00000141510|P04637-2|TP53;nc|ENSG00000141510|P04637-3|TP53 29.081581746732265 0.1611639662936252 6 NV{I|L} 3 6 18.557 0.0 0.0 1.7867 0.0 0.0 694.3997669904312 0.0 694.3997669904312 0.0 2.8431811792050645 0.0 0.0 0 0.5796896906561032 0.0 0.0 0.3807196863200844 + NV{I|L} 1.7867 + + 99 1 1.538 70707.2 1.0 2453 5421 7874 SUDHL4_400M_050219_2,7876 SUDHL4_400M_050219_2,7876,KLLPENNVL False True KLLPENNVL 42.0054 520.311572253704 973129.5625 7874.0 ENSG00000141510|ENST00000269305|TP53;;nc|ENSG00000141510|P04637-2|TP53;;nc|ENSG00000141510|P04637-3|TP53 2.8804744879404702 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7877 42.019 800.0 178570.0 25 0 18320.0 + + -1 YLDAMMNEA 9 160 545.2146480542698 1088.4147431753397 2 545.2148315310478 MULTI CID FTMS 0 0 0 7874 120871.3359375 0.7225754411804266 -1 0.0383987426757812 3 2 Oxidation (M) _ENM(Oxidation (M))M(Oxidation (M))ADLYA_ ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B 26.268140514670165 0.1969607489560049 6 [Y{I|L}]DA{M(Oxidation (M))|F}{M(Oxidation (M))|F}N{[CP]|[EA]} 9 -1 + 42.342 0.0 0.0 3.8902 3.8902 81.402 0.0 0.0 0.0 23.579348470004533 4.762036441594191 4.762036441594191 9.208187539523747 0 0.0 2.0 0.0 0.0 [Y{I|L}]DA{M(Oxidation (M))|F}{M(Oxidation (M))|F}N{[CP]|[EA]};[Y{I|L}]DA{M(Oxidation (M))|F}{M(Oxidation (M))|F}GG{[CP]|[EA]};{NN|[MP]|[D{I|L}]|[EV]}YA{M(Oxidation (M))|F}{M(Oxidation (M))|F}N{[CP]|[EA]};{NN|[MP]|[D{I|L}]|[EV]}YA{M(Oxidation (M))|F}{M(Oxidation (M))|F}GG{[CP]|[EA]};[{I|L}T][EC]Y{M(Oxidation (M))|F}N{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}[YG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}N{[CP]|[EA]};[C(Carbamidomethyl (C))R]Y{M(Oxidation (M))|F}A[EP]{M(Oxidation (M))|F};{[CP]|[EA]}[YV]{M(Oxidation (M))|F}{M(Oxidation (M))|F}N{[CP]|[EA]};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}[PG]DPN{[CP]|[EA]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}E[PG]DPN{[CP]|[EA]} 3.8902;3.0442;1.7238;0.87782;0.78814;0.77232;0.70453;0.60653;0.49577;0.48937 -;-;-;-;-;-;-;-;-;- 1254 1 1.538 108873.4 0.5699999928474426 2454 5421 7874 SUDHL4_400M_050219_2,7877 SUDHL4_400M_050219_2,7877,ENMMADLYA False False YLDAMMNEA 42.019231 545.214831531048 778919.8125 7874.0 ENSG00000101608|ENST00000217652|MYL12A;;ENSG00000118680|ENST00000237500|MYL12B 6.44506311416626 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7878 42.025 295.0 171450.0 25 0 33480.0 + 5246 DKEYKLVV 8 71 497.2845494225181 992.5545459118364 2 497.2848083376884 MULTI CID FTMS 0 0 0 7874 100437.375 0.6735256418383585 -1 0.0383987426757812 4 Unmodified _DKEYKLVV_ REV__ENSG00000121594|ENST00000264246|CD80;REV__ENST00000463729.1_1_3:119263370-119276575:-|nuORF;REV__nc|ENSG00000121594|P33681-2|CD80;REV__nc|ENSG00000121594|P33681-3|CD80 25.399314129420983 0.5099049743284904 6 {NN|[MP]|[D{I|L}]|[EV]}GSYK{I|L}VV 9 -1 + 36.493 0.0 0.0 3.6767 3.6767 78.933 0.0 0.0 0.0 2.922152515121226 21.008425796236885 2.922152515121226 8.288493772929051 0 0.6989700043360187 0.0 0.6861818737241735 0.0 {NN|[MP]|[D{I|L}]|[EV]}GSYK{I|L}VV;WWYK{I|L}VV 3.6767;2.8416 -;- 93 1 1.538 43356.2 1.0 2455 5421 7874 SUDHL4_400M_050219_2,7878 SUDHL4_400M_050219_2,7878,DKEYKLVV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7880 42.03 155.0 314210.0 25 0 61372.0 -1 LFLVCVII 8 80 509.8037624458528 1017.5929719585056 2 509.8039733767509 MULTI CID FTMS 0 0 0 7879 348248.8125 0.7370024505547311 -4 0.1379623413085937 1 Acetyl (Protein N-term),Carbamidomethyl (C) _(Acetyl (Protein N-term))LFLVC(Carbamidomethyl (C))VII_ ENST00000361887.5_2_X:152157945-152158029:-|nuORF 0.7936320650641473 0.8195151834710337 6 H 1 -1 9.5329 0.0 0.0 0.93681 0.0 0.0 862.5260449338948 0.0 862.5260449338948 0.0 4.048341509148541 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.93681 - 2 + 1 1.538 46231.2 1.0 2456 5422 7879 SUDHL4_400M_050219_2,7880 SUDHL4_400M_050219_2,7880,LFLVCVII False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7881 42.033 132.0 406380.0 25 0 43012.0 15008 ILSGQRWI 8 77 486.7833435707346 971.5521342082692 2 486.7831298708916 MULTI CID FTMS 0 0 0 7879 250097.125 0.9006733745276396 -2 0.0726890563964843 2 Unmodified _ILSGQRWI_ ENSG00000070882|ENST00000313367|OSBPL3;ENST00000409863.5_1_7:24839804-24873723:-|nuORF;nc|ENSG00000070882|Q9H4L5-2|OSBPL3;nc|ENSG00000070882|Q9H4L5-3|OSBPL3;nc|ENSG00000070882|Q9H4L5-4|OSBPL3;OSBPL3|p.R837Kfs*6|1|0.48|ENSG00000070882|chr7:24804369-24804372|TCTC/-|frameshift_variant 5.760428011301431 0.7893668129297577 6 C 1 8 9.3323 0.0 0.0 0.96056 0.0 0.0 850.5331884458654 0.0 850.5331884458654 0.0 7.738511645026849 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.96056 - 11 + 1 1.538 49119.6 1.0 2457 5422 7879 SUDHL4_400M_050219_2,7881 SUDHL4_400M_050219_2,7881,ILSGQRWI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7882 42.038 256.0 152840.0 25 0 15590.0 -1 HAIPPTLAM 9 70 483.7571500620577 965.4997471909154 2 483.7571288943291 MULTI CID FTMS 0 0 0 7879 118908.7890625 0.1342272566030286 102 -3.5529708862304688 3 Oxidation (M) _HAIPPTLAM(Oxidation (M))_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 24.67388899826682 0.2172451872415813 6 {I|L}AH{I|L}{[MS]|[{M(Oxidation (M))|F}A]} 6 -1 28.02 0.0 0.0 2.9022 0.0 0.0 295.15172011543126 0.0 295.15172011543126 0.0 11.030768805449185 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}AH{I|L}{[MS]|[{M(Oxidation (M))|F}A]} 2.9022 - 58 1 1.538 37530.5 1.0 2458 5422 7879 SUDHL4_400M_050219_2,7882 SUDHL4_400M_050219_2,7882,HAIPPTLAM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7883 42.047 520.0 137550.0 25 0 15926.0 + 11723 GLIDHQTYL 9 107 530.2765261449089 1058.5384993566176 2 530.2777587771416 MULTI CID FTMS 0 0 0 7879 115627.59375 0.6410947781922468 -2 0.0726890563964843 4 Unmodified _GLIDHQTYL_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 26.88365393820708 0.1891292719743517 6 [HD]QT{I|L}G{I|L}Y{I|L} 9 6 + 43.536 0.0 0.0 4.1128 4.1128 74.085 0.0 0.0 0.0 2.04119982655925 9.577570906191896 2.04119982655925 1.7609125905568137 0 0.6677353201839438 0.0 1.0994850021680094 0.0 [HD]QT{I|L}G{I|L}Y{I|L};[HD]QT{I|L}AVY{I|L};[HQ]DT{I|L}G{I|L}Y{I|L};[HQ]DT{I|L}AVY{I|L};[HD]Q{I|L}TG{I|L}Y{I|L};[HD]Q{I|L}TAVY{I|L};[HQ]D{I|L}TG{I|L}Y{I|L};[HQ]D{I|L}TAVY{I|L};[HD][AG]T{I|L}G{I|L}Y{I|L};[HD][AG]T{I|L}AVY{I|L} 4.1128;3.9465;3.92;3.7536;3.6163;3.45;3.4235;3.2571;3.2429;3.0766 -;-;-;-;-;-;-;-;-;- 709 1 1.538 57232.3 1.0 2459 5422 7879 SUDHL4_400M_050219_2,7883 SUDHL4_400M_050219_2,7883,GLIDHQTYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7884 42.061 800.0 156560.0 25 0 18219.0 + -1 ILFCRPWL 8 140 552.8035683104594 1103.5925836877186 2 552.8032104372978 MULTI CID FTMS 0 0 0 7879 109393.7890625 1.0 0 0.0 5 Carbamidomethyl (C) _ILFC(Carbamidomethyl (C))RPWL_ REV__nc|ENSG00000162493|Q86YL7-3|PDPN;REV__nc|ENSG00000162493|Q86YL7-4|PDPN 26.34127834903884 0.4900704351052977 6 {I|L}{I|L}{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}PP{I|L} 9 -1 + 59.685 0.0 0.0 5.4083 5.4083 78.09 0.0 0.0 0.0 23.63162269376284 11.726307269461742 11.726307269461742 1.578832768929516 0 0.2887254899964357 1.5228787452803376 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}PP{I|L};{I|L}{M(Oxidation (M))|F}{I|L}EE{M(Oxidation (M))|F}PP{I|L};{I|L}{I|L}{M(Oxidation (M))|F}N[SG]{M(Oxidation (M))|F}PP{I|L};{I|L}{M(Oxidation (M))|F}{I|L}N[SG]{M(Oxidation (M))|F}PP{I|L};{I|L}{I|L}{M(Oxidation (M))|F}N[YQ]PP{I|L};{I|L}{I|L}YY[YK]E{I|L};{I|L}{M(Oxidation (M))|F}{I|L}N[YQ]PP{I|L};{I|L}{I|L}{M(Oxidation (M))|F}MHHPP{I|L};{I|L}{M(Oxidation (M))|F}{I|L}MHHPP{I|L};{I|L}{I|L}{M(Oxidation (M))|F}[VP]HHE{I|L} 5.4083;5.2652;4.0284;3.8853;3.8688;3.8313;3.7257;3.6486;3.5055;3.4811 -;-;-;-;-;-;-;-;-;- 2604 + 1 1.538 94620.3 0.550000011920929 2460 5422 7879 SUDHL4_400M_050219_2,7884 SUDHL4_400M_050219_2,7884,ILFCRPWL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7886 42.065 84.0 469730.0 25 0 74487.0 + 1211 AIEGGTVLAL 10 68 472.2753330723413 942.5361132114826 2 472.2764465212822 MULTI CID FTMS 0 0 0 7885 531626.0 0.5396019234812163 3 -0.07244873046875 1 Unmodified _AIEGGTVLAL_ REV__ENSG00000166226|ENST00000299300|CCT2;REV__nc|ENSG00000166226|P78371-2|CCT2 26.88365393820708 0.3646707531412818 6 {I|L}A{I|L} 3 -1 29.693 0.0 0.0 3.1503 0.0 0.0 627.3200326429035 0.0 627.3200326429035 0.0 14.208187539523747 0.0 0.0 0 0.5 0.0 0.0 0.0 {I|L}A{I|L} 3.1503 + + 32 1 1.538 36213.6 1.0 2461 5423 7885 SUDHL4_400M_050219_2,7886 SUDHL4_400M_050219_2,7886,AIEGGTVLAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7887 42.068 99.0 415440.0 25 0 30053.0 + 44214 YLGNINPQM 9 78 533.2550952101623 1064.4956374871244 2 533.2554199099541 MULTI CID FTMS 0 0 0 7885 435695.09375 0.5144174583940493 4 -0.1099853515625 2 Oxidation (M) _YLGNINPQM(Oxidation (M))_ ENSG00000163714|ENST00000473835|U2SURP;ENST00000461591.5_1_3:142720470-142741912:+|nuORF;nc|ENSG00000163714|O15042-2|U2SURP 48.345845343767074 0.0439967357579942 6 [Y{I|L}]NG{I|L}N 6 5 49.308 0.0 0.0 4.632 0.0 0.0 0.0 387.1325753135495 387.1325753135495 24.08613380082664 0.0 0.0 0.0 0 1.0 2.0 0.0 0.2396518287104437 [Y{I|L}]NG{I|L}N 4.632 - 176 1 1.538 39499.7 1.0 2462 5423 7885 SUDHL4_400M_050219_2,7887 SUDHL4_400M_050219_2,7887,YLGNINPQM True False YLGNINPQM 42.067603 533.255419909954 10215526.0 7885.0 ENSG00000163714|ENST00000473835|U2SURP;;ENST00000461591.5_1_3:142720470-142741912:+|nuORF;;nc|ENSG00000163714|O15042-2|U2SURP 6.9840677579243975 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7888 42.069 60.0 829500.0 25 0 173160.0 + 8106 GMYGKIAVM 9 73 501.2904592618345 1000.566365590469 2 501.2908813357353 MULTI CID FTMS 0 0 0 7885 824208.6875 0.8093681137659868 -3 0.1087226867675781 3 Unmodified _EPGKKSRSL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1 4.3292370932331545 0.7635526921153418 6 {M(Oxidation (M))|F} 1 9 13.979 0.0 0.0 1.3971 0.0 0.0 835.5200837074597 0.0 835.5200837074597 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3971 - 8 + 1 1.538 43944.9 1.0 2463 5423 7885 SUDHL4_400M_050219_2,7888 SUDHL4_400M_050219_2,7888,EPGKKSRSL False False GMYGKIAVM 42.06908 501.290881335735 1035381.0625 7885.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;;nc|ENSG00000167986|Q16531-2|DDB1 4.7379335562388105 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7889 42.083 800.0 166310.0 25 0 27248.0 + 14602 IIDQHTFEV 9 148 551.2821976529387 1100.5498423726774 2 551.2834350466728 MULTI CID FTMS 0 0 0 7885 133971.1875 0.4306372270319941 -3 0.1087226867675781 4 Unmodified _IIDQHTFEV_ ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1 70.33199760932243 0.0209706178985989 6 {I|L}{I|L}[YT]ETD 7 6 63.32 0.0 0.0 5.7535 0.0 0.0 0.0 262.09479700260005 262.09479700260005 25.386510310039007 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.2302046884880935 0.0 {I|L}{I|L}[YT]ETD 5.7535 - 2309 + 1 1.538 105028.3 0.6000000238418579 2464 5423 7885 SUDHL4_400M_050219_2,7889 SUDHL4_400M_050219_2,7889,IIDQHTFEV True True IIDQHTFEV 42.082914 551.283435046673 1709478.0 7885.0 ENSG00000167986|ENST00000301764|DDB1;;nc|ENSG00000167986|Q16531-2|DDB1 5.532646656036377 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7890 42.097 800.0 80977.0 25 0 18217.0 -1 0 47 1106.7656971704391 3317.275262111518 3 1107.431323230267 MULTI CID FTMS 0 0 0 7885 109643.6796875 1.0 0 0.0 5 6 T{I|L} 2 -1 12.474 0.0 0.0 0.37604 0.0 0.0 2644.002997562493 456.1205538385376 3100.1235514010305 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 T{I|L} 0.37604 - 51 + 1 1.538 56926.9 0.4300000071525574 2465 5423 7885 SUDHL4_400M_050219_2,7890 SUDHL4_400M_050219_2,7890, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7892 42.102 33.0 1263200.0 25 0 293100.0 27495 PKGVVTAL 8 59 392.7486454145605 783.4827378959211 2 392.7485534548759 MULTI CID FTMS 0 0 0 7891 1781432.125 0.8088640736473486 2 -0.0363349914550781 1 Unmodified _PKGVVTAL_ MER52D_dup518|chr14:71230781-71232935:+|1.82709249221962|0.0272404342012767|6.07|46.0|51|1|anti-sense 0.6903765706972694 0.8201419426409876 6 P 1 7 1.1092 0.0 0.0 0.14158 0.0 0.0 563.3514950754118 120.05094324283436 683.4024383182461 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.14158 + + 1 + 1 1.538 39294.0 1.0 2466 5424 7891 SUDHL4_400M_050219_2,7892 SUDHL4_400M_050219_2,7892,PKGVVTAL False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_2 7893 42.103 68.0 642450.0 25 0 89257.0 + 42637 VTVKHFQP 8 70 478.2704281908084 954.5263034484168 2 478.2692138552666 MULTI CID FTMS 0 0 0 7891 631575.25 0.828926889057943 4 -0.1134872436523437 2 Unmodified _VTVKHFQP_ REV__ENSG00000130733|ENST00000586748|YIPF2 2.577480529830294 0.808687252328423 6 {I|L} 1 -1 10.837 0.0 0.0 1.1354 0.0 0.0 823.4311018876731 0.0 823.4311018876731 0.0 10.837455436468815 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1354 - 3 + 1 1.538 38332.7 1.0 2467 5424 7891 SUDHL4_400M_050219_2,7893 SUDHL4_400M_050219_2,7893,VTVKHFQP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7895 42.109 169.0 287140.0 25 0 38159.0 20309 LLENVRVR 8 78 499.808469911863 997.602386890526 2 499.8085204958916 MULTI CID FTMS 0 0 0 7894 166747.96875 0.9108752506495144 1 -0.0298309326171875 1 Unmodified _LLENVRVR_ ENSG00000128641|ENST00000392318|MYO1B;ENSG00000136286|ENST00000258787|MYO1G;ENSG00000166866|ENST00000300119|MYO1A;ENSG00000176658|ENST00000318217|MYO1D;ENST00000463516.5_1_7:45006053-45008547:-|nuORF;ENST00000483585.5_1_7:45006053-45011824:-|nuORF;nc|ENSG00000128641|O43795-2|MYO1B;nc|ENSG00000136286|B0I1T2-4|MYO1G 8.593279151180031 0.7721714526254883 6 {I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[VP]{M(Oxidation (M))|F} 7 3 14.215 0.0 0.0 1.4249 0.0 0.0 0.0 182.11847510757607 182.11847510757607 4.945845581911161 0.0 0.0 0.0 0 0.2887254899964357 2.0 0.0 0.0 {I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}[VP]{M(Oxidation (M))|F} 1.4249 - 60 1 1.538 43474.6 1.0 2468 5425 7894 SUDHL4_400M_050219_2,7895 SUDHL4_400M_050219_2,7895,LLENVRVR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7896 42.113 221.0 180410.0 25 0 12935.0 + + 18608 KTLEGEFSV 9 76 505.2637134414824 1008.5128739497648 2 505.2627136111259 MULTI CID FTMS 0 0 0 7894 107200.3359375 0.1977226661259436 -4 0.1129417419433593 2 Unmodified _LAEKSEFSV_ ENSG00000100811|ENST00000262238|YY1;ENSG00000230797|ENST00000429584|YY2 39.94969957227396 0.0757326808254658 6 E{M(Oxidation (M))|F}SV 4 -1 48.175 0.0 0.0 4.7769 0.0 0.0 528.2886219709 0.0 528.2886219709 0.0 32.69077524932108 0.0 0.0 0 0.9247425010840048 0.0 1.3494850021680094 0.0 E{M(Oxidation (M))|F}SV 4.7769 + + 106 1 1.538 33681.0 1.0 2469 5425 7894 SUDHL4_400M_050219_2,7896 SUDHL4_400M_050219_2,7896,LAEKSEFSV False False KTLEGEFSV 42.113299 505.262713611126 2669745.25 7894.0 ENSG00000100811|ENST00000262238|YY1;;ENSG00000230797|ENST00000429584|YY2 1.601432278752327 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7897 42.119 330.0 171550.0 25 0 13995.0 + 1393 ALARAWGAL 9 90 464.770023686689 927.525494440178 2 464.7697936892509 MULTI CID FTMS 0 0 0 7894 102923.0390625 0.6549776144766015 -6 0.1720466613769531 3 Unmodified _ALARAWGAL_ REV__ENST00000305626.5_1_4:140375235-140375289:+|nuORF 9.347437153973935 0.588369872918737 6 {I|L} 1 -1 13.495 0.0 0.0 1.4549 0.0 0.0 796.4305522788484 0.0 796.4305522788484 0.0 3.163931154357797 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4549 + + 49 + 1 1.538 49569.4 1.0 2470 5425 7894 SUDHL4_400M_050219_2,7897 SUDHL4_400M_050219_2,7897,ALARAWGAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7898 42.133 800.0 82861.0 25 0 5417.7 + -1 LFPLVLVC 8 110 480.7825865103511 959.5506200875022 2 480.7825805544853 MULTI CID FTMS 0 0 0 7894 91068.78125 0.7073159617204383 -6 0.1720466613769531 4 Carbamidomethyl (C) _LFPLVLVC(Carbamidomethyl (C))_ REV__ENST00000262056.13_1_12:53434781-53434886:+|nuORF 2.889219685676258 0.8067950007271085 6 {I|L} 1 -1 11.783 0.0 0.0 1.2279 0.0 0.0 828.455784737696 0.0 828.455784737696 0.0 1.694092782766905 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2279 + + 62 + 1 1.538 53687.1 0.9200000166893004 2471 5425 7894 SUDHL4_400M_050219_2,7898 SUDHL4_400M_050219_2,7898,LFPLVLVC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7900 42.138 20.0 2075800.0 25 0 491960.0 + 42982 VVTPLPAA 8 61 384.23547859210026 766.4564042510005 2 384.2352783083916 MULTI CID FTMS 0 0 0 7899 3117753.5 0.6722326453831506 4 -0.1417922973632812 1 Unmodified _VVTPLPAA_ REV__ENSG00000145198|ENST00000691901|VWA5B2;REV__ENST00000461141.5_1_3:183952309-183959823:+|nuORF 0.0 0.8243325171867699 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.538 39327.0 1.0 2472 5426 7899 SUDHL4_400M_050219_2,7900 SUDHL4_400M_050219_2,7900,VVTPLPAA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7901 42.139 37.0 1194200.0 25 0 93921.0 -1 0 53 881.9112861213086 1761.8080193094172 2 881.9125854372978 MULTI CID FTMS 0 0 0 7899 1461017.75 0.4789449930490715 3 -0.111724853515625 2 6 {I|L}N[QP]AQAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 14 -1 53.638 0.0 0.0 3.0445 0.0 0.0 211.09568984199376 0.0 211.09568984199376 0.0 34.55238988734104 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.4247425010840047 {I|L}N[QP]AQAEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 3.0445 - 265 1 1.538 37046.6 1.0 2473 5426 7899 SUDHL4_400M_050219_2,7901 SUDHL4_400M_050219_2,7901, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7902 42.14 35.0 1202400.0 25 0 88924.0 43548 WWWWIWWQWW 10 49 874.9028227946941 1747.791092656188 2 874.9088012576103 MULTI CID FTMS 0 0 0 7899 1181211.375 0.1970332001581655 11 -0.4231338500976562 3 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 QDANK[VP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 9 34.671 0.0 0.0 1.9837 0.0 0.0 734.3656280302188 0.0 734.3656280302188 0.0 13.824791817810176 0.0 0.0 0 0.5 0.0 0.0 0.3807196863200844 QDANK[VP]{[QD]|[EN]|[WG]|[KD]|[RS]} 1.9837 - 155 1 1.538 33483.8 1.0 2474 5426 7899 SUDHL4_400M_050219_2,7902 SUDHL4_400M_050219_2,7902,WWWWIWWQWW False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 7903 42.142 76.0 1888300.0 25 0 401210.0 -1 CRCRRCRCRRH 11 103 866.9051780132057 1731.7958030932114 2 866.9075805544853 MULTI CID FTMS 0 0 0 7899 746827.0625 0.9552368847749688 -1 0.0298309326171875 4 4 Carbamidomethyl (C) _C(Carbamidomethyl (C))RC(Carbamidomethyl (C))RRC(Carbamidomethyl (C))RC(Carbamidomethyl (C))RRH_ ENST00000569981.2_1_16:29820228-29821657:-|nuORF 0.3506318815782774 0.8734936314171269 6 [MN]PN{I|L}NADQW{I|L}{M(Oxidation (M))|F}AAQ 15 -1 + 87.46 0.0 0.0 5.0502 5.0502 82.071 0.0 0.0 0.0 54.80233917894273 12.006798604685956 12.006798604685956 6.690067809585756 0 0.6549471895720984 1.5228787452803376 0.0 1.837180496500464 [MN]PN{I|L}NADQW{I|L}{M(Oxidation (M))|F}AAQ;[MN]PN{I|L}NWQW{I|L}{M(Oxidation (M))|F}AAQ;[MN]PGG{I|L}NADQW{I|L}{M(Oxidation (M))|F}AAQ;[MN]PN{I|L}NAD[AG]W{I|L}{M(Oxidation (M))|F}AAQ;[MN]PN{I|L}NADQ{[DA]|[EG]}{I|L}{M(Oxidation (M))|F}AAQ;[MN]PN{I|L}GGADQW{I|L}{M(Oxidation (M))|F}AAQ;[MN]PN{I|L}NAD[RH][Y{M(Oxidation (M))|F}]{I|L}Q;[MN]PN{I|L}NAWW[YG]PAAQ;[MN]PN{I|L}GGWQW{I|L}{M(Oxidation (M))|F}AAQ;[MN]PGG{I|L}NWQW{I|L}{M(Oxidation (M))|F}AAQ 5.0502;4.6639;4.5288;4.5288;4.5288;4.5288;4.3657;4.2452;4.1413;4.1413 -;-;-;-;-;-;-;-;-;- 2117 + 1 1.538 103191.3 1.0 2475 5426 7899 SUDHL4_400M_050219_2,7903 SUDHL4_400M_050219_2,7903,CRCRRCRCRRH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7904 42.148 324.0 305430.0 25 0 28452.0 + 2970 AVIDVGINRV 10 104 528.3136764636201 1054.6127999940402 2 528.3129150271416 MULTI CID FTMS 0 0 0 7899 195351.421875 0.4969330237540714 -3 0.07244873046875 5 Unmodified _AVIDVGINRV_ ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2 43.77239144664712 0.1177314611616471 6 {[VA]|[{I|L}G]}{I|L}DVG{I|L}[RN]V 10 0 + 72.951 0.0 0.0 6.9173 6.9173 84.516 0.0 0.0 0.0 29.28628587624184 3.9224392515220217 3.9224392515220217 3.0102999566398125 0 1.579689690656103 2.0 0.0 0.2887254899964357 + + {[VA]|[{I|L}G]}{I|L}DVG{I|L}[RN]V;{[VA]|[{I|L}G]}{I|L}DVVA[RN]V;{[VA]|[{I|L}G]}{I|L}VDG{I|L}[RN]V;{[VA]|[{I|L}G]}{I|L}VDVA[RN]V 6.9173;6.6319;6.2751;5.9896 +;-;-;- + 1338 + 1 1.538 80658.5 1.0 2476 5426 7899 SUDHL4_400M_050219_2,7904 SUDHL4_400M_050219_2,7904,AVIDVGINRV True True AVIDVGINRV 42.147966 528.312915027142 1874482.625 7899.0 nc|ENSG00000065911|P13995-2|MTHFD2;;ENSG00000065911|ENST00000394053|MTHFD2 5.199863910675049 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7905 42.152 232.0 248670.0 25 0 35428.0 12870 GVVRMKGLW 9 86 523.3031553536141 1044.591757774028 2 523.3038818240166 MULTI CID FTMS 0 0 0 7899 147130.34375 0.3650317976271469 8 -0.2599143981933594 6 Unmodified _GVVRMKGLW_ nc|ENSG00000185332|Q8N8V8|TMEM105 2.302733041254933 0.8342969208511092 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.538 49027.5 1.0 2477 5426 7899 SUDHL4_400M_050219_2,7905 SUDHL4_400M_050219_2,7905,GVVRMKGLW False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 7906 42.157 239.0 160850.0 25 0 16580.0 + -1 IERPDLITY 9 73 560.7682547314063 1119.5219565296125 2 560.7692748904228 MULTI CID FTMS 0 0 0 7899 97675.875 0.22649181195522 4 -0.1417922973632812 7 Oxidation (M) _LSM(Oxidation (M))QNVNGEL_ nc|ENSG00000099204|O14639-5|ABLIM1;nc|ENSG00000099204|O14639-3|ABLIM1;ENSG00000099204|ENST00000533213|ABLIM1;nc|ENSG00000099204|O14639-2|ABLIM1;nc|ENSG00000099204|O14639-4|ABLIM1;nc|ENSG00000099204|O14639-6|ABLIM1 11.494710602746466 0.654671931888957 6 TY 2 -1 24.222 0.0 0.0 2.1636 0.0 0.0 837.4002317094613 0.0 837.4002317094613 0.0 1.5701373412357356 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 TY 2.1636 - 41 + 1 1.538 33512.3 1.0 2478 5426 7899 SUDHL4_400M_050219_2,7906 SUDHL4_400M_050219_2,7906,LSMQNVNGEL False False IERPDLITY 42.156826 560.769274890423 462036.65625 7899.0 nc|ENSG00000099204|O14639-5|ABLIM1;;nc|ENSG00000099204|O14639-3|ABLIM1;;ENSG00000099204|ENST00000533213|ABLIM1;;nc|ENSG00000099204|O14639-2|ABLIM1;;nc|ENSG00000099204|O14639-4|ABLIM1;;nc|ENSG00000099204|O14639-6|ABLIM1 3.355238755544027 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7907 42.171 800.0 123800.0 25 0 7302.6 + 31922 RVADFGSATF 10 126 535.766493478296 1069.5184340233918 2 535.7671996951103 MULTI CID FTMS 0 0 0 7899 100082.09375 0.9354802032562328 -1 0.0298309326171875 8 Unmodified _RVADFGSATF_ ENSG00000179335|ENST00000395066|CLK3;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;ENST00000569406.5_1_15:74914809-74922221:+|nuORF;nc|ENSG00000179335|P49761-3|CLK3 43.9818466556824 0.1155196613165264 6 P{M(Oxidation (M))|F}GSAT{M(Oxidation (M))|F} 7 4 67.787 0.0 0.0 6.3381 0.0 0.0 344.18635756660314 0.0 344.18635756660314 0.0 55.313163910911214 0.0 0.0 0 1.325257498915995 0.0 1.305462187404089 0.0 P{M(Oxidation (M))|F}GSAT{M(Oxidation (M))|F} 6.3381 - 1319 1 1.538 81541.8 0.5099999904632568 2479 5426 7899 SUDHL4_400M_050219_2,7907 SUDHL4_400M_050219_2,7907,RVADFGSATF True True RVADFGSATF 42.170657 535.76719969511 664898.1875 7899.0 ENSG00000179335|ENST00000395066|CLK3;;ENST00000562078.5_1_15:74917060-74922221:+|nuORF;;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;;nc|ENSG00000179335|P49761-3|CLK3;;ENST00000569406.5_1_15:74914809-74922221:+|nuORF 6.663052082061768 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7909 42.188 800.0 177640.0 25 0 6751.4 -1 KYYLCFYLFVL 11 126 764.8957143717695 1527.7768758103389 2 764.8959228396416 MULTI CID FTMS 0 0 0 7908 224495.671875 0.7863901849081546 -2 0.0673675537109375 1 Carbamidomethyl (C) _KYYLC(Carbamidomethyl (C))FYLFVL_ MER57F_dup142|chr6:29552528-29552933:-|5.889111264267852|0.0722232426967899|6.35|48.0|19|3|sense 9.38312468134398 0.8308777417566128 6 {[SA]|[TG]}NV[WR]PSQSANV{I|L} 14 -1 + 123.48 0.0 0.0 8.0821 8.0821 85.269 0.0 0.0 0.0 12.404630595263413 16.667853209646182 12.404630595263413 1.8753063169585005 0 0.6989700043360187 1.0969100130080565 2.6747425010840047 1.7658715643802767 {[SA]|[TG]}NV[WR]PSQSANV{I|L};{[SA]|[TG]}GGV[WR]PSQSANV{I|L};{[SA]|[TG]}GPS[WK]PSQSANV{I|L};{[SA]|[TG]}NV[WR]PSQSAGGV{I|L};{[SA]|[TG]}NV[WR]PS[AG]SANV{I|L};{[SA]|[TG]}GGV[WR]PSQSAGGV{I|L};{[SA]|[TG]}GGV[WR]PS[AG]SANV{I|L};{[QS]|[NT]}GV[WR]PSQSANV{I|L};{[QG]|[NA]}SV[WR]PSQSANV{I|L};{[NV]|[RG]}AS[WR]PSQSANV{I|L} 8.0821;7.9594;7.5812;7.4897;7.4897;7.3683;7.3683;7.2702;7.2656;7.1504 -;-;-;-;-;-;-;-;-;- 11193 1 1.538 102816.1 0.449999988079071 2480 5427 7908 SUDHL4_400M_050219_2,7909 SUDHL4_400M_050219_2,7909,KYYLCFYLFVL False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_2 7910 42.191 143.0 435690.0 25 0 22092.0 + 13496 HLYPGAVTI 9 93 485.7701968040476 969.5258406748952 2 485.7711364626884 MULTI CID FTMS 0 0 0 7908 270177.34375 1.0 0 0.0 2 Unmodified _HLYPGAVTI_ ENSG00000116191|ENST00000367635|RALGPS2;ENST00000478871.1_1_1:178863027-178885491:+|nuORF;ENST00000480743.1_1_1:178855116-178863183:+|nuORF;nc|ENSG00000116191|Q86X27-3|RALGPS2 26.34127834903884 0.1960301806784604 6 {I|L}{I|L}GA[YG]Y[{I|L}T] 9 5 + 30.581 0.0 0.0 3.1542 3.1542 69.417 0.0 0.0 0.0 6.461280356782382 7.147642715192507 6.461280356782382 0.4575749056067515 0 1.0 1.5228787452803376 0.0 0.0 {I|L}{I|L}GA[YG]Y[{I|L}T];{I|L}{I|L}G[YQ]Y[{I|L}T];{I|L}{I|L}Q[YG]Y[{I|L}T];{I|L}{I|L}GS[HM]V[{I|L}T];[H{I|L}]Y[PG]AV[{I|L}T];[H{I|L}]Y[QP]V[{I|L}T];[Q{I|L}]YYAV[{I|L}T];[Q{I|L}]{I|L}[YG]Y[{I|L}T];[{I|L}T][VG][HM]V[{I|L}T];[AG]{[RE]|[WV]}[PG]AV[{I|L}T] 3.1542;3.107;2.7965;2.6775;2.4878;2.3117;0.97786;0.87259;0.43298;0.42317 -;-;-;-;+;-;-;-;-;- + 237 1 1.538 56373.8 1.0 2481 5427 7908 SUDHL4_400M_050219_2,7910 SUDHL4_400M_050219_2,7910,HLYPGAVTI False True HLYPGAVTI 42.191257 485.771136462688 1661876.5 7908.0 ENSG00000116191|ENST00000367635|RALGPS2;;ENST00000478871.1_1_1:178863027-178885491:+|nuORF;;nc|ENSG00000116191|Q86X27-3|RALGPS2;;ENST00000480743.1_1_1:178855116-178863183:+|nuORF 4.854011535644531 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7911 42.196 279.0 344750.0 25 0 40285.0 37723 TLQHIVTLL 9 109 519.3212652905038 1036.6279776478077 2 519.3215209841728 MULTI CID FTMS 0 0 0 7908 208979.609375 0.944792218323114 -1 0.03753662109375 3 Unmodified _TLQHIVTLL_ ENSG00000168434|ENST00000307149|COG7;ENST00000566364.1_1_16:23400243-23404677:-|nuORF 41.8396318013385 0.0653578398400075 6 KVT{I|L}{I|L} 5 5 51.67 0.0 0.0 4.9844 0.0 0.0 464.23860366035314 0.0 464.23860366035314 0.0 40.70107520596089 0.0 0.0 0 0.8494850021680094 0.0 0.8494850021680094 0.4247425010840047 KVT{I|L}{I|L} 4.9844 - 322 1 1.538 76290.6 1.0 2482 5427 7908 SUDHL4_400M_050219_2,7911 SUDHL4_400M_050219_2,7911,TLQHIVTLL True True KHLDVVTLL 42.196405 519.321520984173 1422157.75 7908.0 nc|ENSG00000151067|Q13936-13|CACNA1C;;nc|ENSG00000151067|Q13936-20|CACNA1C;;nc|ENSG00000151067|Q13936-32|CACNA1C;;nc|ENSG00000151067|Q13936-5|CACNA1C;;nc|ENSG00000151067|Q13936-7|CACNA1C;;nc|ENSG00000157388|Q01668-2|CACNA1D;;ENSG00000081248|ENST00000362061|CACNA1S;;nc|ENSG00000151067|Q13936-37|CACNA1C;;nc|ENSG00000151067|Q13936-29|CACNA1C;;nc|ENSG00000151067|Q13936-10|CACNA1C;;ENSG00000151067|ENST00000399655|CACNA1C;;nc|ENSG00000151067|Q13936-26|CACNA1C;;nc|ENSG00000151067|Q13936-14|CACNA1C;;nc|ENSG00000151067|Q13936-11|CACNA1C;;nc|ENSG00000151067|Q13936-4|CACNA1C;;nc|ENSG00000151067|Q13936-9|CACNA1C;;nc|ENSG00000151067|Q13936-8|CACNA1C;;nc|ENSG00000151067|Q13936-30|CACNA1C;;nc|ENSG00000151067|Q13936-36|CACNA1C;;nc|ENSG00000151067|Q13936-19|CACNA1C;;ENSG00000157388|ENST00000350061|CACNA1D;;nc|ENSG00000157388|Q01668-3|CACNA1D;;nc|ENSG00000151067|Q13936-16|CACNA1C;;nc|ENSG00000151067|Q13936-34|CACNA1C;;nc|ENSG00000151067|Q13936-3|CACNA1C;;nc|ENSG00000151067|Q13936|CACNA1C;;nc|ENSG00000151067|Q13936-35|CACNA1C;;nc|ENSG00000151067|Q13936-2|CACNA1C;;nc|ENSG00000151067|Q13936-31|CACNA1C;;nc|ENSG00000151067|Q13936-23|CACNA1C;;nc|ENSG00000151067|Q13936-17|CACNA1C;;nc|ENSG00000151067|Q13936-24|CACNA1C;;nc|ENSG00000151067|Q13936-22|CACNA1C;;nc|ENSG00000151067|Q13936-6|CACNA1C;;nc|ENSG00000151067|Q13936-28|CACNA1C;;nc|ENSG00000157388|Q01668-4|CACNA1D;;nc|ENSG00000151067|Q13936-15|CACNA1C;;nc|ENSG00000151067|Q13936-18|CACNA1C;;nc|ENSG00000151067|Q13936-33|CACNA1C;;nc|ENSG00000151067|Q13936-25|CACNA1C;;nc|ENSG00000151067|Q13936-27|CACNA1C;;nc|ENSG00000151067|Q13936-21|CACNA1C 4.40463391939799 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7912 42.21 800.0 161940.0 25 0 48111.0 -1 0 93 596.0932849973173 595.0860085307172 1 596.0949584841728 MULTI CID FTMS 0 0 0 7908 125854.109375 1.0 0 0.0 4 6 Q 1 -1 14.525 0.0 0.0 2.4408 0.0 0.0 449.0166095822781 0.0 449.0166095822781 0.0 3.2659517851202047 0.0 0.0 0 0.0 0.0 0.0 0.2742275032520141 Q 2.4408 - 11 + 1 1.538 101112.9 0.550000011920929 2483 5427 7908 SUDHL4_400M_050219_2,7912 SUDHL4_400M_050219_2,7912, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7914 42.215 73.0 371020.0 25 0 26390.0 -1 LALSMLPTV 9 65 493.7818362811986 985.5491196291972 2 494.2834655642509 MULTI CID FTMS 0 0 0 7913 344718.09375 0.4452858465275065 6 -0.1827621459960937 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LALSMLPTV_ ENST00000548241.1_1_12:56637631-56637871:-|nuORF 11.640296217721598 0.521594087909532 6 SV 2 -1 19.253 0.0 0.0 1.9535 0.0 0.0 781.4378658223598 0.0 781.4378658223598 0.0 13.767959391884546 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 SV 1.9535 - 14 + 1 1.538 26379.5 1.0 2484 5428 7913 SUDHL4_400M_050219_2,7914 SUDHL4_400M_050219_2,7914,LALSMLPTV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7915 42.227 702.0 166620.0 25 0 20912.0 + 19919 LIAAIVGPL 9 144 433.7878358682805 865.5611188033611 2 433.7876464724541 MULTI CID FTMS 0 0 0 7913 70452.859375 0.2581849933085801 5 -0.1566619873046875 2 Unmodified _LIAAIVGPL_ REV__ENSG00000127954|ENST00000380079|STEAP4 14.581692164780916 0.4419739649577144 6 {I|L} 1 -1 12.474 0.0 0.0 1.4412 0.0 0.0 734.4662529359767 0.0 734.4662529359767 0.0 4.582269742749623 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4412 + + 61 + 1 1.538 93463.9 1.0 2485 5428 7913 SUDHL4_400M_050219_2,7915 SUDHL4_400M_050219_2,7915,LIAAIVGPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7916 42.235 427.0 176050.0 25 0 25720.0 + 1953 AMNPTNTVF 9 97 497.73664346707113 993.4587340009424 2 497.7360717654228 MULTI CID FTMS 0 0 0 7913 93105.3671875 0.0428173956854648 -7 0.2199249267578125 3 Unmodified _AMNPTNTVF_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000443628.2_1_X:114011085-114011187:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 37.97399986684836 0.0865783450051559 6 [TP]NTNAMV{M(Oxidation (M))|F} 9 5 + 43.628 0.0 0.0 4.3915 4.3915 78.957 0.0 0.0 0.0 5.3223121176349935 8.903106758641002 5.3223121176349935 5.3223121176349935 0 1.1677353201839438 0.6777807052660807 1.6861818737241734 0.5 [TP]NTNAMV{M(Oxidation (M))|F};{[QS]|[NT]}PTNAMV{M(Oxidation (M))|F};[NP]TTNAMV{M(Oxidation (M))|F};[TP]NNTAMV{M(Oxidation (M))|F};[TP]NTGGAMV{M(Oxidation (M))|F};[TP]GGTNAMV{M(Oxidation (M))|F};{[QS]|[NT]}PNTAMV{M(Oxidation (M))|F};[NP]TNTAMV{M(Oxidation (M))|F};{[QS]|[NT]}PTGGAMV{M(Oxidation (M))|F};[NP]TTGGAMV{M(Oxidation (M))|F} 4.3915;3.8558;3.789;3.711;3.4646;3.4646;3.1752;3.1084;2.9289;2.8621 -;-;-;-;-;-;-;-;-;- 362 1 1.538 61942.8 1.0 2486 5428 7913 SUDHL4_400M_050219_2,7916 SUDHL4_400M_050219_2,7916,AMNPTNTVF True True AMNPTNTVF 42.234844 497.736071765423 10791743.0 7913.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;;ENST00000443628.2_1_X:114011085-114011187:-|nuORF 7.2778401374816895 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7917 42.245 570.0 147280.0 25 0 21653.0 + 15191 KVIEPLKDF 9 129 545.3172057463412 1088.6198585594825 2 545.3167602419853 MULTI CID FTMS 0 0 0 7913 129319.296875 0.2619075436483828 -15 0.4890670776367187 4 Unmodified _IPEKGFKASL_ nc|ENSG00000163655|P49915-2|GMPS;ENSG00000163655|ENST00000496455|GMPS 6.2057823575117 0.6979311171683138 6 {M(Oxidation (M))|F} 1 9 11.109 0.0 0.0 1.0205 0.0 0.0 923.540617692098 0.0 923.540617692098 0.0 2.262268922861057 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0205 + + 62 + 1 1.538 70920.7 1.0 2487 5428 7913 SUDHL4_400M_050219_2,7917 SUDHL4_400M_050219_2,7917,IPEKGFKASL False False KVIEPLKDF 42.244844 545.316760241985 368884.25 7913.0 nc|ENSG00000163655|P49915-2|GMPS;;ENSG00000163655|ENST00000496455|GMPS 0.1247969667116801 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7919 42.263 800.0 202580.0 25 0 27482.0 -1 TLIEEMLLM 9 122 554.7873929089508 1107.5602328847017 2 554.7876464724541 MULTI CID FTMS 0 0 0 7918 156068.34375 0.9886081723795712 -1 0.0345726013183593 1 Oxidation (M) _TLIEEMLLM(Oxidation (M))_ ENSG00000204334|ENST00000697325|ERICH2;nc|ENSG00000204334|A1L162|ERICH2 48.345845343767074 0.0439967357579942 6 [{I|L}T]{I|L}TD 5 -1 55.317 0.0 0.0 4.9945 0.0 0.0 0.0 561.2455450297666 561.2455450297666 25.380157967289 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.6861818737241735 0.0 [{I|L}T]{I|L}TD 4.9945 - 812 + 1 1.538 126929.9 0.5299999713897705 2488 5429 7918 SUDHL4_400M_050219_2,7919 SUDHL4_400M_050219_2,7919,TLIEEMLLM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7920 42.268 290.0 211730.0 25 0 22158.0 9790 FPAAQAPA 8 101 386.702853784968 0 386.7028686404228 PEAK CID FTMS 0 0 0 7918 138131.953125 1.0 0 0.0 2 Unmodified _FPAAQAPA_ ENSG00000085185|ENST00000540052|BCORL1;nc|ENSG00000085185|Q5H9F3-1|BCORL1;nc|ENSG00000085185|Q5H9F3-4|BCORL1 0.7936320650641473 0.5979579398327216 6 D 1 8 8.2268 0.0 0.0 1.0665 0.0 0.0 537.2905972410314 116.05098901920157 653.3415862602329 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 D 1.0665 - 12 + 1 1.538 54797.3 1.0 2489 5429 7918 SUDHL4_400M_050219_2,7920 SUDHL4_400M_050219_2,7920,FPAAQAPA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7921 42.275 394.0 253850.0 25 0 34365.0 + 20727 ILSGVIRSV 9 120 472.2995812600041 942.5846095868084 2 472.2998535037041 MULTI CID FTMS 0 0 0 7918 110277.8046875 1.0 0 0.0 3 Unmodified _LLSGTALLR_ ENST00000597467.1_1_19:7701993-7703991:+|nuORF;ENST00000595181.5_1_19:7702035-7704702:+|nuORF;nc|ENSG00000076944|Q15833-2|STXBP2;ENSG00000076944|ENST00000221283|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2;ENST00000599905.1_1_19:7702035-7703991:+|nuORF 27.628801355627647 0.1796483985696185 6 {I|L}{I|L}SGV[RV]S{I|L} 9 5 + 53.553 0.0 0.0 5.6815 5.6815 77.192 0.0 0.0 0.0 38.86046240493748 1.029543537615183 1.029543537615183 0.4575749056067479 0 0.4247425010840047 2.0 0.5994850021680094 0.0 {I|L}{I|L}SGV[RV]S{I|L};{I|L}{I|L}SR[RV]S{I|L};{I|L}{I|L}SGV{I|L}RSV;{I|L}{I|L}SR{I|L}RSV;{I|L}{I|L}SGV[RV]TV;{I|L}{I|L}SR[RV]TV;{I|L}{I|L}V[SG][RV]S{I|L};{I|L}{I|L}V[SG]{I|L}RSV;{I|L}{I|L}V[SG][RV]TV;{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[RV]S{I|L} 5.6815;5.633;5.1345;5.086;4.6692;4.6206;4.5178;3.9708;3.5054;0.88731 -;-;-;-;-;-;-;-;-;- 347 + 1 1.538 80039.4 1.0 2490 5429 7918 SUDHL4_400M_050219_2,7921 SUDHL4_400M_050219_2,7921,LLSGTALLR False False ILSGVIRSV 42.274902 472.299853503704 514602.40625 7918.0 ENST00000597467.1_1_19:7701993-7703991:+|nuORF;;ENST00000595181.5_1_19:7702035-7704702:+|nuORF;;nc|ENSG00000076944|Q15833-2|STXBP2;;ENSG00000076944|ENST00000221283|STXBP2;;nc|ENSG00000076944|Q15833-3|STXBP2;;ENST00000599905.1_1_19:7702035-7703991:+|nuORF 4.238162279129028 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7923 42.281 162.0 287690.0 25 0 45637.0 + 13516 HMPITLIS 8 68 456.2566283544109 910.4987037756218 2 456.2566100955009 MULTI CID FTMS 0 0 0 7922 258517.84375 0.7987794156625081 -3 0.1042556762695312 1 Unmodified _HMPITLIS_ REV__ENSG00000197181|ENST00000356766|PIWIL2;REV__nc|ENSG00000197181|Q8TC59-2|PIWIL2 2.889219685676258 0.8067950007271085 6 C 1 -1 3.4949 0.0 0.0 0.38384 0.0 0.0 454.26333497855 350.1966951959594 804.4600301745094 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.38384 - 2 + 1 1.538 43352.1 1.0 2491 5430 7922 SUDHL4_400M_050219_2,7923 SUDHL4_400M_050219_2,7923,HMPITLIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7924 42.282 60.0 612820.0 25 0 93622.0 -1 AMNPTNTVF 9 63 505.73408218882594 1009.453611444452 2 505.7344238162041 MULTI CID FTMS 0 0 0 7922 514617.84375 0.2469598235109501 -5 0.1716232299804687 2 Oxidation (M) _AM(Oxidation (M))NPTNTVF_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000443628.2_1_X:114011085-114011187:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 24.020572477871973 0.2255576514309169 6 T{[QC]|[C(Carbamidomethyl (C))A]}T{M(Oxidation (M))|F}{M(Oxidation (M))|F} 6 -1 28.734 0.0 0.0 2.8465 0.0 0.0 264.14576339933313 0.0 264.14576339933313 0.0 13.78530614985209 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.4247425010840047 T{[QC]|[C(Carbamidomethyl (C))A]}T{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.8465 - 103 + 1 1.538 35100.1 1.0 2492 5430 7922 SUDHL4_400M_050219_2,7924 SUDHL4_400M_050219_2,7924,AMNPTNTVF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7925 42.296 800.0 131860.0 25 0 10165.0 -1 FLPEPMGTA 9 134 489.7330510449745 977.4515491567488 2 489.7332336306572 MULTI CID FTMS 0 0 0 7922 92852.609375 0.8411863701175468 -2 0.0646400451660156 3 Oxidation (M) _FLPEPM(Oxidation (M))GTA_ chr19:579656-581444|46|21.0|0.0|21.0|+|ENST00000618112|BSG,None;ENSG00000172270|ENST00000333511|BSG;nc|ENSG00000172270|P35613-2|BSG;nc|ENSG00000172270|P35613-4|BSG 30.22481116460888 0.1466181017706357 6 [EP][HQ][EP]{[QN]|[E{I|L}]|[KN]} 8 -1 + 22.196 0.0 0.0 2.2708 2.2708 70.887 0.0 0.0 0.0 2.208114504772226 2.208114504772226 2.208114504772226 2.208114504772226 0 0.3494850021680094 1.154901959985743 0.9247425010840048 0.0 [EP][HQ][EP]{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[EP]WDTA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GTA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QN]|[E{I|L}]|[KN]};{[SA]|[TG]}[W{M(Oxidation (M))|F}][EP]{[QN]|[E{I|L}]|[KN]};[TP]CTA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QN]|[E{I|L}]|[KN]};[WD]TA{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GT[WE]{[QN]|[E{I|L}]|[KN]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GTA[EP]{I|L}{M(Oxidation (M))|F};{[SA]|[TG]}[W{M(Oxidation (M))|F}][HA]{I|L}{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[EP]{[CP]|[EA]}C(Carbamidomethyl (C)){I|L} 2.2708;2.0449;1.4212;1.3266;1.2631;1.2465;1.0664;0.96951;0.8749;0.86588 -;-;-;-;-;-;-;-;-;- 373 1 1.538 85098.0 0.4699999988079071 2493 5430 7922 SUDHL4_400M_050219_2,7925 SUDHL4_400M_050219_2,7925,FLPEPMGTA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7926 42.31 800.0 138010.0 25 0 7787.8 -1 0 102 909.413793318084 1816.813033702968 2 909.9183837771416 MULTI CID FTMS 0 0 0 7922 94150.5234375 0.3934104828659836 -6 0.1781272888183593 4 6 [NP]{I|L}NA[YT]{[SA]|[TG]}DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 17 -1 + 67.587 0.0 0.0 3.7201 3.7201 72.061 0.0 0.0 0.0 11.194771390605553 41.702426523074735 11.194771390605553 1.249387366082999 0 0.8494850021680094 0.958607314841775 0.0 1.2302046884880935 [NP]{I|L}NA[YT]{[SA]|[TG]}DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA{[DS]|[MA]|[CV]|TT}[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA{[DS]|[MA]|[CV]|TT}[YG]WN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YG]WN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNA[YT]{[SA]|[TG]}DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNA{[DS]|[MA]|[CV]|TT}[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PN{[WS]|[C(Carbamidomethyl (C)){I|L}]}[YG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNA{[DS]|[MA]|[CV]|TT}[YG]WN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NA[YT]{[SA]|[TG]}DY{I|L}ES{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.7201;3.6513;3.5437;3.2811;3.1744;2.9107;2.842;2.7343;2.4717;2.4141 -;-;-;-;-;-;-;-;-;- 752 1 1.538 76310.3 0.4799999892711639 2494 5430 7922 SUDHL4_400M_050219_2,7926 SUDHL4_400M_050219_2,7926, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7928 42.315 153.0 309910.0 25 0 60786.0 14384 IFDWLLLV 8 72 509.8037624458528 1017.5929719585056 2 509.8039123415947 MULTI CID FTMS 0 0 0 7927 329954.5625 0.6982861460129579 5 -0.2031898498535156 1 Unmodified _IFDWLLLV_ ENSG00000048707|ENST00000620676|VPS13D;ENST00000460333.5_1_1:12359354-12409038:+|nuORF;ENST00000487188.1_1_1:12371595-12395946:+|nuORF;nc|ENSG00000048707|Q5THJ4-2|VPS13D 2.889219685676258 0.8067950007271085 6 {I|L} 1 7 10.379 0.0 0.0 1.0199 0.0 0.0 886.4980297971761 0.0 886.4980297971761 0.0 8.784809756568528 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0199 + + 6 + 1 1.538 42625.3 1.0 2495 5431 7927 SUDHL4_400M_050219_2,7928 SUDHL4_400M_050219_2,7928,IFDWLLLV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7929 42.329 800.0 244220.0 25 0 14916.0 -1 0 141 901.4164513147032 1800.8183496962065 2 901.4181396365166 MULTI CID FTMS 0 0 0 7927 169887.953125 0.476098206772182 -3 0.0994987487792968 2 6 [MN]PN{I|L}NAD{M(Oxidation (M))|F}T{I|L}AAR 14 -1 101.24 0.0 0.0 5.622 0.0 0.0 0.0 269.0452669733032 269.0452669733032 35.58598098705387 0.0 0.0 0.0 0 1.2689301784845295 1.5228787452803376 0.9291746928241126 1.1237125054200234 [MN]PN{I|L}NAD{M(Oxidation (M))|F}T{I|L}AAR 5.622 - 49980 + 1 1.538 126655.7 0.6399999856948853 2496 5431 7927 SUDHL4_400M_050219_2,7929 SUDHL4_400M_050219_2,7929, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7930 42.343 800.0 167880.0 25 0 20169.0 -1 0 135 516.3009402802825 515.2936638136824 1 516.3014404177666 MULTI CID FTMS 0 0 0 7927 118623.15625 0.7210492379240183 -1 0.0348587036132812 3 6 {I|L} 1 -1 11.783 0.0 0.0 2.2866 0.0 0.0 384.1987369111418 0.0 384.1987369111418 0.0 -0.2069634257911268 -0.2069634257911268 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.2866 - 56 + 1 1.538 103629.0 0.5299999713897705 2497 5431 7927 SUDHL4_400M_050219_2,7930 SUDHL4_400M_050219_2,7930, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7931 42.357 800.0 118610.0 25 0 9772.6 + -1 RLWSAGQPGL 10 119 542.7989516300446 1083.583350326889 2 542.7989990115166 MULTI CID FTMS 0 0 0 7927 92699.7734375 0.8077614756006165 -3 0.0994987487792968 4 Carbamidomethyl (C) _PGLCLPC(Carbamidomethyl (C))LLV_ ENST00000338338.9_1_1:1309740-1310620:-|nuORF;ENST00000321751.9_1_1:1309740-1310526:-|nuORF;ENST00000378853.3_1_1:1309740-1310526:-|nuORF 12.531546534597751 0.6372748319968624 6 {[QV]|[N{I|L}]|[RA]|[KV]}[WK]EQPG{I|L} 9 -1 + 36.414 0.0 0.0 3.3606 3.3606 75.397 0.0 0.0 0.0 4.611812126263445 10.374758638225943 4.611812126263445 4.771212547196626 0 1.1331596456423734 0.744727494896694 0.0 0.3252574989159953 {[QV]|[N{I|L}]|[RA]|[KV]}[WK]EQPG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[WK]EQPAV;{[QV]|[N{I|L}]|[RA]|[KV]}[WK]QEPG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[WQ]KEPG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}G{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KEPG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[WK]QEPAV;{[QV]|[N{I|L}]|[RA]|[KV]}[WQ]KEPAV;{[QV]|[N{I|L}]|[RA]|[KV]}G{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KEPAV;{[QV]|[N{I|L}]|[RA]|[KV]}[WK]QTT{[HG]|PP};{[QV]|[N{I|L}]|[RA]|[KV]}[WQ]KTT{[HG]|PP} 3.3606;2.9202;2.8049;2.5482;2.506;2.3646;2.1079;2.0657;2.0164;1.7597 -;-;-;-;-;-;-;-;-;- 658 1 1.538 83286.7 0.4900000095367431 2498 5431 7927 SUDHL4_400M_050219_2,7931 SUDHL4_400M_050219_2,7931,PGLCLPCLLV False False RLWSAGQPGL 42.356854 542.798999011517 1243053.5 7927.0 ENST00000338338.9_1_1:1309740-1310620:-|nuORF;;ENST00000321751.9_1_1:1309740-1310526:-|nuORF;;ENST00000378853.3_1_1:1309740-1310526:-|nuORF 4.073691288630168 2.0 False 10.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7933 42.362 71.0 608180.0 25 0 132060.0 31864 RTKNELLQ 8 64 501.2904592618345 1000.566365590469 2 501.2906371951103 MULTI CID FTMS 0 0 0 7932 663850.25 0.6518970654086667 6 -0.2646217346191406 1 Unmodified _RTKNELLQ_ ENSG00000141026|ENST00000268711|MED9 2.302733041254933 0.8103549651115762 6 H 1 8 10.0 0.0 0.0 0.99943 0.0 0.0 845.4989045082409 0.0 845.4989045082409 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.99943 - 1 + 1 1.538 37227.4 1.0 2499 5432 7932 SUDHL4_400M_050219_2,7933 SUDHL4_400M_050219_2,7933,RTKNELLQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7934 42.367 241.0 217500.0 25 0 23170.0 -1 TLPRLCAL 8 84 472.2753330723413 942.5361132114826 2 472.2715331912041 MULTI CID FTMS 0 0 0 7932 141239.875 0.1433588805330186 12 -0.4557952880859375 2 Carbamidomethyl (C) _TLPRLC(Carbamidomethyl (C))AL_ ENSG00000167914|ENST00000301659|GSDMA 13.50788311687929 0.7113601687236069 6 {I|L} 1 -1 13.979 0.0 0.0 1.4832 0.0 0.0 811.441171050153 0.0 811.441171050153 0.0 5.907431454711938 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.4832 + + 42 + 1 1.538 45985.8 1.0 2500 5432 7932 SUDHL4_400M_050219_2,7934 SUDHL4_400M_050219_2,7934,TLPRLCAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7936 42.372 85.0 592340.0 25 0 26735.0 + -1 WPWRWCWRRWA 11 70 873.4233388593626 0 873.4231445193291 PEAK CID FTMS 0 0 0 7935 408534.46875 0.8700111264449022 1 -0.0261001586914062 1 Carbamidomethyl (C) _WPWRWC(Carbamidomethyl (C))WRRWA_ REV__nc|ENSG00000127252|Q9HDD0-2|PLAAT1 0.0 0.4761840153648598 6 VPN{I|L}NEAQ 8 -1 29.545 0.0 0.0 1.6933 0.0 0.0 146.05949402556263 730.3647554986936 876.4242495242563 0.0 0.0 0.0 0.0 0 0.3182503180159344 0.0 0.0 0.4247425010840047 VPN{I|L}NEAQ 1.6933 - 263 + 1 1.538 38215.1 1.0 2501 5433 7935 SUDHL4_400M_050219_2,7936 SUDHL4_400M_050219_2,7936,WPWRWCWRRWA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7937 42.375 138.0 353710.0 25 0 11835.0 + 29866 QQVPVNQVF 9 84 529.7855883756657 1057.5566238181314 2 529.7853881716728 MULTI CID FTMS 0 0 0 7935 419404.21875 0.7512704093970551 -2 0.0571632385253906 2 Unmodified _QQVPVNQVF_ ENSG00000100316|ENST00000216146|RPL3;ENST00000474162.1_1_5:60686735-60687614:-|nuORF;ENST00000481985.5_1_22:39710087-39711482:-|nuORF 67.34385681178166 0.0221257235307089 6 {[QN]|[E{I|L}]|[KN]}{I|L}PVNQV{M(Oxidation (M))|F} 9 2 + 72.396 0.0 0.0 6.8456 6.8456 91.279 0.0 0.0 0.0 13.588330105925252 7.944539621753535 7.944539621753535 9.208187539523756 0 0.6989700043360187 0.0 1.6549471895720984 1.7764209843288905 {[QN]|[E{I|L}]|[KN]}{I|L}PVNQV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}PVGGQV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}PVN[AG]V{M(Oxidation (M))|F};[VP]NQ{I|L}NQV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[VP]{I|L}NQV{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}PVGG[AG]V{M(Oxidation (M))|F};QQVPVNQV{M(Oxidation (M))|F};[VP]NQVQQV{M(Oxidation (M))|F};[VP]GGQ{I|L}NQV{M(Oxidation (M))|F};[VP]NQ{I|L}N[AG]V{M(Oxidation (M))|F} 6.8456;5.9749;5.9749;5.5607;5.2656;5.1083;4.7984;4.7184;4.69;4.69 -;-;-;-;-;-;+;-;-;- + 478 1 1.538 47967.9 1.0 2502 5433 7935 SUDHL4_400M_050219_2,7937 SUDHL4_400M_050219_2,7937,QQVPVNQVF True True QQVPVNQVF 42.374526 529.785388171673 3328167.75 7935.0 ENST00000481985.5_1_22:39710087-39711482:-|nuORF;;ENSG00000100316|ENST00000216146|RPL3;;ENST00000474162.1_1_5:60686735-60687614:-|nuORF 5.626621166865031 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7938 42.377 145.0 371370.0 25 0 66932.0 9257 FHKPGLEK 8 76 478.2704281908084 954.5263034484168 2 478.2694274783134 MULTI CID FTMS 0 0 0 7935 352405.34375 0.4625232943850832 13 -0.6045188903808594 3 Unmodified _FHKPGLEK_ ENSG00000173705|ENST00000309558|SUSD5 2.577480529830294 0.808687252328423 6 {I|L} 1 7 10.278 0.0 0.0 1.0767 0.0 0.0 823.4311934404075 0.0 823.4311934404075 0.0 10.277586639249154 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0767 + + 4 + 1 1.538 45732.7 1.0 2503 5433 7935 SUDHL4_400M_050219_2,7938 SUDHL4_400M_050219_2,7938,FHKPGLEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7939 42.382 276.0 218010.0 25 0 49032.0 983 AFRNQFSL 8 77 491.7593812323812 981.5042095315624 2 491.7589294314384 MULTI CID FTMS 0 0 0 7935 168877.234375 0.6696388830511734 -2 0.0571632385253906 4 Unmodified _AFRNQFSL_ ENSG00000242419|ENST00000306593|PCDHGC4;nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4 26.34127834903884 0.4900704351052977 6 Q{I|L}AE 4 7 33.928 0.0 0.0 3.4567 0.0 0.0 522.2451039044937 0.0 522.2451039044937 0.0 18.711375162600703 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.4247425010840047 Q{I|L}AE 3.4567 - 44 1 1.538 49316.5 1.0 2504 5433 7935 SUDHL4_400M_050219_2,7939 SUDHL4_400M_050219_2,7939,AFRNQFSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7940 42.393 602.0 217540.0 25 0 22626.0 + 16341 IYLEKLKTI 9 116 560.8524777562412 1119.6904025792824 2 560.8523437380791 MULTI CID FTMS 0 0 0 7935 149741.40625 0.6547549628170891 -1 0.0100784301757812 5 Unmodified _IYLEKLKTI_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 114.18643581695662 0.0037801735748066 6 {I|L}Y{I|L}EK{I|L}KT{I|L} 9 0 + 123.66 0.0 0.0 11.044 11.044 99.59 0.0 0.0 0.0 60.964307978057576 12.587418566968154 12.587418566968154 56.14105515695832 0 2.3169015600442577 2.0 2.268930178484529 0.0 + + {I|L}Y{I|L}EK{I|L}KT{I|L};[Y{I|L}]{I|L}EKKT{I|L}{I|L};[Y{I|L}]{I|L}EK{I|L}KT{I|L};[Y{I|L}]E{I|L}KKT{I|L}{I|L};[Y{I|L}]E{I|L}K{I|L}KT{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}KT{I|L}Y{I|L};[Y{I|L}]EK{I|L}KT{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}YKT{I|L}{I|L};[Y{I|L}]EK{I|L}{I|L}KT{I|L};{[QN]|[E{I|L}]|[KN]}K{I|L}KTY{I|L}{I|L} 11.044;6.0302;5.9755;5.3855;5.3308;5.3109;4.9389;4.9;4.8842;4.8808 +;-;+;-;-;-;-;-;-;- + 2886 + 1 1.538 102313.8 1.0 2505 5433 7935 SUDHL4_400M_050219_2,7940 SUDHL4_400M_050219_2,7940,IYLEKLKTI True True IYLEKLKTI 42.393029 560.852343738079 885515.0625 7935.0 nc|ENSG00000178209|Q15149-5|PLEC;;nc|ENSG00000178209|Q15149-8|PLEC;;nc|ENSG00000178209|Q15149-6|PLEC;;nc|ENSG00000178209|Q15149|PLEC;;nc|ENSG00000178209|Q15149-9|PLEC;;nc|ENSG00000178209|Q15149-3|PLEC;;nc|ENSG00000178209|Q15149-7|PLEC;;nc|ENSG00000178209|Q15149-2|PLEC;;ENSG00000178209|ENST00000345136|PLEC 3.2375137408574424 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7942 42.398 140.0 418810.0 25 0 73730.0 -1 VPAAAALL 8 84 384.23547859210026 766.4564042510005 2 384.2353698611259 MULTI CID FTMS 0 0 0 7941 438747.6875 0.094600332779312 12 -0.5784187316894531 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VPAAAALL_ ENST00000308064.6_1_11:45687014-45687152:-|nuORF;ENST00000380574.5_2_11:2923688-2923841:+|nuORF 0.7936320650641473 0.8195151834710337 6 T 1 -1 1.2591 0.0 0.0 0.16427 0.0 0.0 383.2458767625224 279.14573084049067 662.3916076030131 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.16427 - 1 + 1 1.538 53764.6 1.0 2506 5434 7941 SUDHL4_400M_050219_2,7942 SUDHL4_400M_050219_2,7942,VPAAAALL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7943 42.409 601.0 168430.0 25 0 14392.0 18818 LARLQGRD 8 124 464.770023686689 927.525494440178 2 464.7702819705009 MULTI CID FTMS 0 0 0 7941 122456.765625 0.7792855803342287 3 -0.1632194519042968 2 Unmodified _LARLQGRD_ ENSG00000172425|ENST00000302783|TTC36;ENST00000533501.5_1_11:118398735-118401628:+|nuORF;nc|ENSG00000172425|A6NLP5-2|TTC36 5.230669730166228 0.792582437072536 6 {I|L} 1 7 11.42 0.0 0.0 1.2312 0.0 0.0 796.4306438315828 0.0 796.4306438315828 0.0 2.087677823677092 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2312 + + 28 + 1 1.538 82269.3 1.0 2507 5434 7941 SUDHL4_400M_050219_2,7943 SUDHL4_400M_050219_2,7943,LARLQGRD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7944 42.423 800.0 136030.0 25 0 27213.0 + + 12341 KVPQLEIVPN 10 128 568.8372278525568 1135.6599027719135 2 568.8373290896416 MULTI CID FTMS 0 0 0 7941 119511.4140625 1.0 0 0.0 3 Unmodified _GTALQPLPVQL_ P02662 27.628801355627647 0.4434699450731472 6 [QP]{I|L}E{I|L}VKVPN 10 -1 + 59.672 0.0 0.0 5.2544 5.2544 87.509 0.0 0.0 0.0 4.259687322722812 43.5972296328408 4.259687322722812 11.332946754800377 0 1.0682503180159344 0.0 0.6549471895720985 0.3054621874040891 [QP]{I|L}E{I|L}VKVPN;[QP]{I|L}EV{I|L}KVPN;[QP]{I|L}EVK{I|L}VPN;[VP]AAE{I|L}VKVPN;[QP]{I|L}VE{I|L}KVPN;[QP]{I|L}VEK{I|L}VPN;[VP]AAEV{I|L}KVPN;[QP]V{I|L}E{I|L}KVPN;[NP]{I|L}{I|L}E{I|L}KVPN;[VP]AAEVK{I|L}VPN 5.2544;4.2565;3.9914;3.9683;3.267;3.0019;2.9704;2.7879;2.7327;2.7054 -;-;-;-;-;-;-;-;-;- 2464 1 1.538 87994.9 0.5600000023841858 2508 5434 7941 SUDHL4_400M_050219_2,7944 SUDHL4_400M_050219_2,7944,GTALQPLPVQL False False KVPQLEIVPN 42.422731 568.837329089642 663659.375 7941.0 P02662 0.9771084388097128 2.0 False 10.0 True unknown PXD020620_cell_line SUDHL4_400M_050219_2 7946 42.429 133.0 381360.0 25 0 27262.0 -1 0 72 881.9112861213086 1761.8080193094172 2 881.9210082888603 MULTI CID FTMS 0 0 0 7945 426640.375 0.1398595406789741 12 -0.6098403930664062 1 6 {I|L}QAEN{I|L}[NP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 10 -1 29.486 0.0 0.0 1.6736 0.0 0.0 620.2999134748062 0.0 620.2999134748062 0.0 10.41833743429045 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 {I|L}QAEN{I|L}[NP]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 1.6736 - 290 1 1.538 37790.4 1.0 2509 5435 7945 SUDHL4_400M_050219_2,7946 SUDHL4_400M_050219_2,7946, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7947 42.435 304.0 278720.0 25 0 40438.0 + -1 TVVLLVECL 9 97 523.3031553536141 1044.591757774028 2 523.3035156130791 MULTI CID FTMS 0 0 0 7945 173665.828125 0.4308665895227739 17 -0.7267112731933594 2 Carbamidomethyl (C) _TVVLLVEC(Carbamidomethyl (C))L_ REV__ENSG00000161677|ENST00000598418|JOSD2;REV__nc|ENSG00000161677|Q8TAC2-2|JOSD2 4.3292370932331545 0.7635526921153418 6 Y 1 -1 10.278 0.0 0.0 0.98389 0.0 0.0 863.5173997191438 0.0 863.5173997191438 0.0 1.0693990997254057 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.98389 - 21 + 1 1.538 71137.6 1.0 2510 5435 7945 SUDHL4_400M_050219_2,7947 SUDHL4_400M_050219_2,7947,TVVLLVECL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7948 42.445 599.0 180350.0 25 0 19801.0 + 10499 FTVPDTREL 9 114 539.2823164853422 1076.5500800374843 2 539.2817870974541 MULTI CID FTMS 0 0 0 7945 129343.640625 0.3605387912280028 -1 0.0296974182128906 3 Unmodified _FTVPDTREL_ ENSG00000119522|ENST00000394215|DENND1A;ENST00000473039.5_1_9:126143713-126520026:-|nuORF;ENST00000474676.1_1_9:126331853-126520026:-|nuORF;nc|ENSG00000119522|Q8TEH3-2|DENND1A;nc|ENSG00000119522|Q8TEH3-3|DENND1A;nc|ENSG00000119522|Q8TEH3-4|DENND1A;nc|ENSG00000119522|Q8TEH3-5|DENND1A;nc|ENSG00000119522|Q8TEH3-6|DENND1A;nc|ENSG00000119522|Q8TEH3-7|DENND1A;nc|ENSG00000119522|Q8TEH3|DENND1A 28.49450938151212 0.1686335738423394 6 [{I|L}T][R{M(Oxidation (M))|F}]DPVTE 9 7 + 58.478 0.0 0.0 5.4319 5.4319 84.847 0.0 0.0 0.0 6.612781694939258 47.37619943964535 6.612781694939258 8.538719643217618 0 0.3807196863200844 1.154901959985743 0.0 0.4247425010840047 [{I|L}T][R{M(Oxidation (M))|F}]DPVTE;{[ET]|[MV]}V[R{M(Oxidation (M))|F}]PVTE;{M(Oxidation (M))|F}TVPDT{[RE]|[WV]}{I|L};{M(Oxidation (M))|F}TVPDT[{I|L}V]W;{[QV]|[N{I|L}]|[RA]|[KV]}GC(Carbamidomethyl (C))[TA]{I|L}VTE;{[QV]|[N{I|L}]|[RA]|[KV]}G{[QG]|[NA]}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VTE;{[QV]|[N{I|L}]|[RA]|[KV]}RR[CS]VTE;{M(Oxidation (M))|F}TV{I|L}[WD]T[VP];{[QV]|[N{I|L}]|[RA]|[KV]}G[CG][TA]{I|L}VTE;{M(Oxidation (M))|F}TV{I|L}[WD][PS]{I|L} 5.4319;4.6388;4.3592;4.0753;3.3358;2.8648;2.7912;2.7561;2.4845;1.7372 -;-;+;-;-;-;-;-;-;- + 393 1 1.538 92038.3 1.0 2511 5435 7945 SUDHL4_400M_050219_2,7948 SUDHL4_400M_050219_2,7948,FTVPDTREL False True FTVPDTREL 42.445378 539.281787097454 1972555.0 7945.0 nc|ENSG00000119522|Q8TEH3-3|DENND1A;;nc|ENSG00000119522|Q8TEH3-5|DENND1A;;ENST00000473039.5_1_9:126143713-126520026:-|nuORF;;nc|ENSG00000119522|Q8TEH3-2|DENND1A;;nc|ENSG00000119522|Q8TEH3|DENND1A;;nc|ENSG00000119522|Q8TEH3-4|DENND1A;;ENSG00000119522|ENST00000394215|DENND1A;;ENST00000474676.1_1_9:126331853-126520026:-|nuORF;;nc|ENSG00000119522|Q8TEH3-7|DENND1A;;nc|ENSG00000119522|Q8TEH3-6|DENND1A 5.319926738739014 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7949 42.459 800.0 221070.0 25 0 22874.0 + 35099 SQVPTQMSF 9 173 520.739488779405 1039.4644246256098 2 520.7401611208916 MULTI CID FTMS 0 0 0 7945 114364.25 0.8564776036967737 -2 0.0557975769042968 4 Oxidation (M) _SQVPTQM(Oxidation (M))SF_ ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP 51.41523569358685 0.0372669606867193 6 {[QS]|[NT]}VPTQ{M(Oxidation (M))|F}S{M(Oxidation (M))|F} 9 0 + 47.267 0.0 0.0 4.5473 4.5473 82.655 0.0 0.0 0.0 35.67332825043944 13.467874862246552 13.467874862246552 9.208187539523742 0 1.2059771852360797 0.721246399047171 1.3026048219588937 0.0 + + {[QS]|[NT]}VPTQ{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[QS]|[NT]}VPT[AG]{M(Oxidation (M))|F}S{M(Oxidation (M))|F};{[QS]|[NT]}VPTQ{M(Oxidation (M))|F}AY;{[QS]|[NT]}VPT[AG]{M(Oxidation (M))|F}AY;{[QS]|[NT]}Y{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YV]{M(Oxidation (M))|F};{[QS]|[NT]}VCCHHKV;{[QN]|[E{I|L}]|[KN]}[KC]S{M(Oxidation (M))|F}[WK] 4.5473;3.6614;3.1069;2.2211;0.61693;0.27113;0.056004 +;-;-;-;-;-;- + 730 + 1 1.538 133939.2 0.5199999809265137 2512 5435 7945 SUDHL4_400M_050219_2,7949 SUDHL4_400M_050219_2,7949,SQVPTQMSF True False SQVPTQMSF 42.45921 520.740161120892 1022018.875 7945.0 nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;;ENSG00000100991|ENST00000252015|TRPC4AP 6.917584578196208 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7950 42.47 621.0 158220.0 25 0 13986.0 + 45461 YTFDPVTKV 9 131 535.2827407811162 1068.5509286290323 2 535.2821533083916 MULTI CID FTMS 0 0 0 7945 111477.4609375 1.0 0 0.0 5 Unmodified _YTFDPVTKV_ ENSG00000185009|ENST00000355264|AP3M1 42.83518252547288 0.0598927335801051 6 YT{M(Oxidation (M))|F}DPVTKV 9 0 + 76.052 0.0 0.0 7.1173 7.1173 93.315 0.0 0.0 0.0 49.0128127936196 11.606826106850946 11.606826106850946 12.588316958086992 0 0.6643943297944485 2.0 0.2887254899964357 0.1271595765414318 + + YT{M(Oxidation (M))|F}DPVTKV;YT{M(Oxidation (M))|F}DPV[KS]{I|L};YT[RN]{[MG]|[TS]}TKV;{[TV]|[{I|L}S]}K[{I|L}T]D{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;YT[R{I|L}][RD]{M(Oxidation (M))|F}V;YT{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}P{I|L};YT{M(Oxidation (M))|F}{[VA]|[{I|L}G]}[RP]C{I|L};YT[R{I|L}]{[WT]|[RM]}MV;[KT]V[{I|L}T]D{M(Oxidation (M))|F}{M(Oxidation (M))|F}V;[YT][RD][R{I|L}]{M(Oxidation (M))|F}V 7.1173;5.9392;4.2286;3.4001;2.8357;2.3684;2.3684;2.2775;1.8591;1.6081 +;-;-;-;-;-;-;-;-;- + 415 + 1 1.538 80355.5 1.0 2513 5435 7945 SUDHL4_400M_050219_2,7950 SUDHL4_400M_050219_2,7950,YTFDPVTKV True True YTFDPVTKV 42.470053 535.282153308392 633073.9375 7945.0 ENSG00000185009|ENST00000355264|AP3M1 6.98118527730306 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7951 42.484 800.0 195050.0 25 0 12533.0 + 8912 FAHPYQYEL 9 151 584.2766136367908 1166.5386743403817 2 584.2771484255791 MULTI CID FTMS 0 0 0 7945 100100.484375 0.4792537699420977 -1 0.0296974182128906 6 Unmodified _FAHPYQYEL_ ENSG00000171824|ENST00000376936|EXOSC10;nc|ENSG00000171824|Q01780-2|EXOSC10 36.04419817259434 0.0971720506436186 6 {[MS]|[{M(Oxidation (M))|F}A]}HPYQYE{I|L} 9 0 + 55.001 0.0 0.0 4.7149 4.7149 76.632 0.0 0.0 0.0 2.261782159117537 16.478174818886373 2.261782159117537 2.261782159117537 0 0.3807196863200844 0.0 0.5994850021680094 0.6382104921644451 + + {[MS]|[{M(Oxidation (M))|F}A]}HPYQYE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QHA{M(Oxidation (M))|F}YE{I|L};[YE][WK]HYE{I|L};{[QN]|[E{I|L}]|[KN]}Y[NS]HYE{I|L};{[QN]|[E{I|L}]|[KN]}{[QC]|[C(Carbamidomethyl (C))A]}AAQYE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QYEHA{M(Oxidation (M))|F}{I|L};[Q{I|L}]{M(Oxidation (M))|F}HA{M(Oxidation (M))|F}YE{I|L};{[QN]|[E{I|L}]|[KN]}{[QC]|[C(Carbamidomethyl (C))A]}[RN]YE{I|L};[YE][YK]WHE{I|L};{[MS]|[{M(Oxidation (M))|F}A]}HPY[AG]YE{I|L} 4.7149;4.521;4.1588;4.0356;3.8062;3.6687;3.5053;3.5043;3.463;3.3784 +;-;-;-;-;-;-;-;-;- + 2361 1 1.538 116370.1 0.5099999904632568 2514 5435 7945 SUDHL4_400M_050219_2,7951 SUDHL4_400M_050219_2,7951,FAHPYQYEL True True FAHPYQYEL 42.483884 584.277148425579 1291377.5 7945.0 ENSG00000171824|ENST00000376936|EXOSC10;;nc|ENSG00000171824|Q01780-2|EXOSC10 6.201896190643311 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7952 42.498 800.0 73512.0 25 0 5743.1 -1 0 74 758.3636824821527 3029.4256240622108 4 758.8660766482353 MULTI CID FTMS 0 0 0 7945 76274.4765625 1.0 0 0.0 7 6 G 1 -1 6.9897 0.0 0.0 0.23073 0.0 0.0 880.3730416044822 2089.0039766900995 2969.377018294582 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.23073 - 23 + 1 1.538 50522.7 0.4699999988079071 2515 5435 7945 SUDHL4_400M_050219_2,7952 SUDHL4_400M_050219_2,7952, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7953 42.513 800.0 34628.0 25 0 5809.5 -1 0 43 1101.4540308053072 0 1101.767871081829 PEAK CID FTMS 0 0 0 -1 0 8 6 TS 2 -1 7.9588 0.0 0.0 0.36162 0.0 0.0 1259.4803217565598 750.3195894830686 2009.7999112396285 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TS 0.36162 - 33 + 1 1.538 30978.3 0.4300000071525574 2516 5435 7945 SUDHL4_400M_050219_2,7953 SUDHL4_400M_050219_2,7953, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7955 42.518 35.0 1083200.0 25 0 157410.0 + 23160 LSQDHTFF 8 63 497.73664346707113 993.4587340009424 2 497.7368957400322 MULTI CID FTMS 0 0 0 7954 1500752.75 0.6901677772602838 1 -0.0432929992675781 1 Unmodified _LSQDHTFF_ REV__ENSG00000180881|ENST00000699294|CAPS2;REV__nc|ENSG00000180881|Q9BXY5-2|CAPS2;REV__nc|ENSG00000180881|Q9BXY5-5|CAPS2;REV__nc|ENSG00000180881|Q9BXY5|CAPS2 20.871210003555333 0.6025813472596342 6 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TANT{M(Oxidation (M))|F}{M(Oxidation (M))|F} 8 -1 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TA + + 35.037 13.188 2.8286 3.5268 3.5268 52.825 0.0 0.0 0.0 0.0 9.095019080956064 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}TANT{M(Oxidation (M))|F}{M(Oxidation (M))|F} 3.5268 - 181 + 1 1.535 35429.8 1.0 2517 5436 7954 SUDHL4_400M_050219_2,7955 SUDHL4_400M_050219_2,7955,LSQDHTFF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7956 42.523 291.0 216570.0 25 0 28759.0 9641 FLNGLAQLLT 10 86 545.3172057463412 1088.6198585594825 2 545.3163329958916 MULTI CID FTMS 0 0 0 7954 141905.5 0.2873981055674959 -7 0.2681159973144531 2 Unmodified _FLNGLAQLLT_ ENSG00000197563|ENST00000640252|PIGN;ENST00000587942.1_1_18:59713091-59751818:-|nuORF 13.90604991867851 0.6142120002215601 6 REK{I|L} 4 9 21.591 0.0 0.0 1.9834 0.0 0.0 544.288377830275 0.0 544.288377830275 0.0 9.601664440497345 0.0 0.0 0 0.353165816373186 0.0 0.4247425010840047 0.0 REK{I|L} 1.9834 - 52 1 1.535 53036.6 1.0 2518 5436 7954 SUDHL4_400M_050219_2,7956 SUDHL4_400M_050219_2,7956,FLNGLAQLLT False True FLEEANRVL 42.523249 545.316332995892 1016363.625 7954.0 ENSG00000132275|ENST00000254605|RRP8;;ENST00000526352.5_1_11:6621466-6622302:-|nuORF 4.987948735555013 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7957 42.537 800.0 274610.0 25 0 19377.0 -1 0 120 1031.450255914786 3091.3289383445585 3 1031.786425769329 MULTI CID FTMS 0 0 0 7954 248226.34375 0.4511633843068557 -2 0.1199264526367187 3 6 GAGK[{M(Oxidation (M))|F}V]SYC(Carbamidomethyl (C))[HT] 11 -1 40.27 0.0 0.0 1.3027 0.0 0.0 1865.796891744376 0.0 1865.796891744376 0.0 8.096752366169582 0.0 0.0 0 0.0 0.0 2.1861818737241734 0.2614393726401688 GAGK[{M(Oxidation (M))|F}V]SYC(Carbamidomethyl (C))[HT] 1.3027 - 89672 + 1 1.535 139297.2 0.7400000095367432 2519 5436 7954 SUDHL4_400M_050219_2,7957 SUDHL4_400M_050219_2,7957, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7958 42.549 683.0 171050.0 25 0 18599.0 20698 LLRQASER 8 132 486.7833435707346 971.5521342082692 2 486.7849914431572 MULTI CID FTMS 0 0 0 7954 97741.609375 0.3519963100237303 12 -0.5520973205566406 4 Unmodified _LLRQASER_ ENSG00000099260|ENST00000263174|PALMD;nc|ENSG00000099260|Q9NP74-2|PALMD;nc|ENSG00000099260|Q9NP74-3|PALMD 9.347437153973935 0.7675937258251505 6 {I|L}{I|L}GSD 5 5 12.95 0.0 0.0 1.3329 0.0 0.0 0.0 483.28575172219433 483.28575172219433 1.356150930823148 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.25 0.0 {I|L}{I|L}GSD 1.3329 - 159 1 1.535 91840.2 1.0 2520 5436 7954 SUDHL4_400M_050219_2,7958 SUDHL4_400M_050219_2,7958,LLRQASER False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7959 42.556 418.0 320890.0 25 0 28733.0 + 40676 VLFEHAVGY 9 141 517.7682303441933 1033.5219077551865 2 517.7690307497978 MULTI CID FTMS 0 0 0 7954 190586.1875 0.5987262597188889 -2 0.1199264526367187 5 Unmodified _VLFEHAVGY_ ENSG00000101361|ENST00000329276|NOP56;ENST00000470143.1_1_20:2633306-2634188:+|nuORF;ENST00000494697.5_1_20:2633306-2634895:+|nuORF 54.773552608820026 0.0299037012502309 6 V{I|L}[HT]V{M(Oxidation (M))|F}VGY 9 4 + 72.355 0.0 0.0 7.0008 7.0008 80.595 0.0 0.0 0.0 31.18104045525776 14.09256854528806 14.09256854528806 0.0774978714403715 0 1.524227503252014 2.0 0.0 0.0 V{I|L}[HT]V{M(Oxidation (M))|F}VGY;{[YC]|[HE]}{M(Oxidation (M))|F}AV{I|L}GVY;{[YC]|[HE]}{M(Oxidation (M))|F}AVG{I|L}VY;{[YC]|[HE]}{M(Oxidation (M))|F}AV{I|L}VGY;{[YC]|[HE]}{M(Oxidation (M))|F}AV{I|L}RY;V{I|L}[HS]{I|L}{M(Oxidation (M))|F}VGY;{[YC]|[HE]}{M(Oxidation (M))|F}A{I|L}VGVY;V{I|L}[HT]VA[MT]Y;{[YC]|[HE]}{M(Oxidation (M))|F}AR{I|L}VY;{[YC]|[HE]}{M(Oxidation (M))|F}A{I|L}VVGY 7.0008;6.9934;6.9934;6.823;6.6578;6.5392;6.5317;6.5311;6.3665;6.3613 -;-;-;-;-;-;-;-;-;- 1746 + 1 1.535 104582.2 1.0 2521 5436 7954 SUDHL4_400M_050219_2,7959 SUDHL4_400M_050219_2,7959,VLFEHAVGY True True VLFEHAVGY 42.556448 517.769030749798 1598371.75 7954.0 ENST00000494697.5_1_20:2633306-2634895:+|nuORF;;ENST00000470143.1_1_20:2633306-2634188:+|nuORF;;ENSG00000101361|ENST00000329276|NOP56 7.878835678100586 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7961 42.561 27.0 1688400.0 25 0 219990.0 + -1 AMNPTNTVF 9 75 505.73408218882594 1009.453611444452 2 505.7345153689384 MULTI CID FTMS 0 0 0 7960 1898237.625 0.9109447613316364 2 -0.0895118713378906 1 Oxidation (M) _AM(Oxidation (M))NPTNTVF_ ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000443628.2_1_X:114011085-114011187:-|nuORF 30.63653989081413 0.1413794767160703 6 NMV{M(Oxidation (M))|F} 4 -1 27.691 0.0 0.0 2.7431 0.0 0.0 500.2278556844894 0.0 500.2278556844894 0.0 5.0147128475507685 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 NMV{M(Oxidation (M))|F} 2.7431 - 96 + 1 1.535 42902.4 1.0 2522 5437 7960 SUDHL4_400M_050219_2,7961 SUDHL4_400M_050219_2,7961,AMNPTNTVF False False AMNPTNTVF 42.561038 505.734515368938 47183397.0 7960.0 ENSG00000109971|ENST00000534624|HSPA8;;nc|ENSG00000109971|P11142-2|HSPA8;;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;;ENST00000443628.2_1_X:114011085-114011187:-|nuORF 7.501828193664551 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7962 42.565 225.0 175450.0 25 0 13189.0 -1 0 57 909.413793318084 1816.813033702968 2 909.9166747927666 MULTI CID FTMS 0 0 0 7960 214768.578125 0.8974162536726149 1 -0.0652236938476562 2 6 [NP]{I|L}N{[QS]|[NT]}QQHAN 11 -1 23.499 0.0 0.0 1.2934 0.0 0.0 0.0 582.2360333332841 582.2360333332841 13.195316896499529 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 [NP]{I|L}N{[QS]|[NT]}QQHAN 1.2934 - 66 1 1.535 32020.1 1.0 2523 5437 7960 SUDHL4_400M_050219_2,7962 SUDHL4_400M_050219_2,7962, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7963 42.569 177.0 289450.0 25 0 26760.0 + 8684 EVISKLYAV 9 86 511.299601418952 1020.584649904704 2 511.2996703982353 MULTI CID FTMS 0 0 0 7960 307849.53125 0.75760385114852 1 -0.0652236938476562 3 Unmodified _EVISKLYAV_ ENSG00000156261|ENST00000286788|CCT8;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 25.399314129420983 0.2080152500878129 6 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[HT]{I|L}{I|L}SG 9 5 43.795 0.0 0.0 4.2912 0.0 0.0 0.0 68.05145441226796 68.05145441226796 20.09418057675049 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.8494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}{I|L}[HT]{I|L}{I|L}SG 4.2912 - 315 + 1 1.535 45642.2 1.0 2524 5437 7960 SUDHL4_400M_050219_2,7963 SUDHL4_400M_050219_2,7963,EVISKLYAV False True EVISKLYAV 42.56875 511.299670398235 2128978.75 7960.0 nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 6.637315114339192 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7964 42.574 303.0 247280.0 25 0 25455.0 -1 LSPCSCTSR 9 76 534.2359273118541 1066.457301690508 2 534.2367431521416 MULTI CID FTMS 0 0 0 7960 157435.90625 0.8389091606044403 -1 0.0432929992675781 4 2 Carbamidomethyl (C) _LSPC(Carbamidomethyl (C))SC(Carbamidomethyl (C))TSR_ ENST00000219281.7_1_16:58054964-58055177:+|nuORF 22.736283301280096 0.2418982879461534 6 {[TV]|[{I|L}S]}PD{I|L} 5 -1 53.328 0.0 0.0 5.0005 0.0 0.0 0.0 538.1567438504999 538.1567438504999 30.65166884247504 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.3494850021680094 0.0 {[TV]|[{I|L}S]}PD{I|L} 5.0005 - 115 + 1 1.535 67170.7 1.0 2525 5437 7960 SUDHL4_400M_050219_2,7964 SUDHL4_400M_050219_2,7964,LSPCSCTSR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 7965 42.588 800.0 190040.0 25 0 23213.0 + 44186 YLFEPHSGEEY 11 128 685.7981300740004 1369.5817072148006 2 685.7993652224541 MULTI CID FTMS 0 0 0 7960 147025.296875 0.4757811039195534 -4 0.1893196105957031 5 Unmodified _YLFEPHSGEEY_ ENSG00000096063|ENST00000373825|SRPK1;nc|ENSG00000096063|Q96SB4-3|SRPK1;nc|ENSG00000096063|Q96SB4-4|SRPK1 69.10491478415734 0.0349985100263309 6 Y{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}EYYY 9 7 + 93.031 0.0 0.0 6.7926 6.7926 80.794 0.0 0.0 0.0 54.34955642535896 13.181730208188895 13.181730208188895 0.7390874094431865 0 1.492992819099939 2.0 1.9049471895720984 0.0 Y{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}EYYY;Y{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}YEYYY;Y{I|L}{M(Oxidation (M))|F}EY{M(Oxidation (M))|F}P[DN]Y;Y{I|L}{M(Oxidation (M))|F}EY{M(Oxidation (M))|F}YYY;Y{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}EP[DN]Y;Y{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}YEP[DN]Y;Y{I|L}{M(Oxidation (M))|F}YE{M(Oxidation (M))|F}YYY;Y{I|L}{M(Oxidation (M))|F}Y{M(Oxidation (M))|F}PE[DN]Y;Y{I|L}{M(Oxidation (M))|F}YE{M(Oxidation (M))|F}P[DN]Y;Y{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}YPE[DN]Y 6.7926;6.7387;6.3877;6.2832;6.2768;6.2229;6.1174;5.9285;5.9117;5.8745 -;-;-;-;-;-;-;-;-;- 4529 + 1 1.535 110982.7 0.6200000047683716 2526 5437 7960 SUDHL4_400M_050219_2,7965 SUDHL4_400M_050219_2,7965,YLFEPHSGEEY True True YLFEPHSGEEY 42.588129 685.799365222454 2218632.25 7960.0 nc|ENSG00000096063|Q96SB4-3|SRPK1;;ENSG00000096063|ENST00000373825|SRPK1;;nc|ENSG00000096063|Q96SB4-4|SRPK1 7.909850756327311 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7966 42.595 360.0 156430.0 25 0 18864.0 + 26759 PAAVCGLPAL 10 93 456.2566283544109 910.4987037756218 2 456.2569763064384 MULTI CID FTMS 0 0 0 7960 150107.75 0.4638093026466914 4 -0.1548233032226562 6 Unmodified _PAAVCGLPAL_ REV__ENSG00000110324|ENST00000227752|IL10RA;REV__ENST00000530761.5_1_11:117857521-117870353:+|nuORF 7.910154910731844 0.6900473968920092 6 {I|L} 1 -1 11.783 0.0 0.0 1.2941 0.0 0.0 779.4035327324563 0.0 779.4035327324563 0.0 -2.910000986994969 -2.910000986994969 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2941 + + 18 + 1 1.535 46614.0 1.0 2527 5437 7960 SUDHL4_400M_050219_2,7966 SUDHL4_400M_050219_2,7966,PAAVCGLPAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7967 42.608 800.0 101850.0 25 0 9215.3 + + 8436 SEFKGDLETL 10 115 569.7859059688607 1137.5572590045213 2 569.7857543826103 MULTI CID FTMS 0 0 0 7960 122254.890625 1.0 0 0.0 7 Unmodified _ESLNVTDFTL_ nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1;ENSG00000009307|ENST00000358528|CSDE1 43.77239144664712 0.1177314611616471 6 [{I|L}T][QA]E{M(Oxidation (M))|F}SET{I|L} 10 -1 + 45.028 0.0 0.0 3.9583 3.9583 71.724 0.0 0.0 0.0 0.5115252244738144 10.452490459521968 0.5115252244738144 0.5115252244738144 0 0.8182503180159344 1.3979400086720375 0.5752574989159953 0.0 [{I|L}T][QA]E{M(Oxidation (M))|F}SET{I|L};{[QN]|[E{I|L}]|[KN]}[DG]K{M(Oxidation (M))|F}SET{I|L};[{I|L}T][QA]E{M(Oxidation (M))|F}TDT{I|L};{[QN]|[E{I|L}]|[KN]}[DG]K{M(Oxidation (M))|F}TDT{I|L};{[ES]|[DT]|[{I|L}C]}[TP]K{M(Oxidation (M))|F}SET{I|L};{[MG]|[TS]}[EP]K{M(Oxidation (M))|F}SET{I|L};{[ES]|[DT]|[{I|L}C]}[TP]K{M(Oxidation (M))|F}TDT{I|L};{[MG]|[TS]}[EP]K{M(Oxidation (M))|F}TDT{I|L};{[MG]|[TS]}[KP]E{M(Oxidation (M))|F}SET{I|L};[QT]{[QG]|[NA]}K{M(Oxidation (M))|F}SET{I|L} 3.9583;3.9133;3.6936;3.6487;3.5933;3.5825;3.3287;3.3179;3.3179;3.2934 -;-;-;-;-;-;-;-;-;- 911 1 1.535 65772.5 0.550000011920929 2528 5437 7960 SUDHL4_400M_050219_2,7967 SUDHL4_400M_050219_2,7967,ESLNVTDFTL False False SEFKGDLETL 42.608444 569.78575438261 631437.9375 7960.0 nc|ENSG00000009307|O75534-2|CSDE1;;nc|ENSG00000009307|O75534-3|CSDE1;;nc|ENSG00000009307|O75534-4|CSDE1;;ENSG00000009307|ENST00000358528|CSDE1 4.610922972361247 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7968 42.622 774.0 139450.0 25 0 22491.0 + 22917 LSDPVHLTV 9 124 490.7750768296943 979.5356007261886 2 490.7755920290947 MULTI CID FTMS 0 0 0 7960 97785.65625 0.8243580097432671 -1 0.0432929992675781 8 Unmodified _LSDPVHLTV_ ENSG00000072694|ENST00000358671|FCGR2B;ENSG00000143226|ENST00000271450|FCGR2A;ENST00000465075.6_1_1:161559398-161559893:+|nuORF;ENST00000467654.1_1_1:161475257-161480016:+|nuORF;ENST00000473530.6_1_1:161559398-161565518:+|nuORF;ENST00000480308.5_1_1:161633004-161643868:+|nuORF;ENST00000485778.1_1_1:161633004-161641486:+|nuORF;nc|ENSG00000072694|P31994-2|FCGR2B;nc|ENSG00000072694|P31994-3|FCGR2B;nc|ENSG00000072694|P31994-4|FCGR2B;nc|ENSG00000072694|P31994-5|FCGR2B;nc|ENSG00000143226|P12318-2|FCGR2A;nc|ENSG00000244682|P31995-2|FCGR2C;nc|ENSG00000244682|P31995-3|FCGR2C;nc|ENSG00000244682|P31995-4|FCGR2C;nc|ENSG00000244682|P31995|FCGR2C 74.92900055777586 0.0191935851694334 6 {I|L}SDPV{I|L}HTV 9 2 + 86.997 0.0 0.0 8.8815 8.8815 84.046 0.0 0.0 0.0 36.47817481888637 0.5115252244738144 0.5115252244738144 0.5115252244738144 0 1.055462187404089 2.0 1.4361818737241734 0.0 {I|L}SDPV{I|L}HTV;{I|L}SDPV{I|L}HS{I|L};{I|L}SD{I|L}[VP]HTV;{I|L}SD{I|L}[VP]HS{I|L};{I|L}SD{I|L}T{I|L}RY;{I|L}SD{I|L}T[YR]{I|L};{[TV]|[{I|L}S]}H{I|L}T[DP]VV;{[TV]|[{I|L}S]}H[VP]{[ET]|[MV]}VV;{[TV]|[{I|L}S]}H{[QG]|[NA]}[Q{I|L}]VV;{I|L}[{M(Oxidation (M))|F}V][HK]HTV 8.8815;8.8293;6.8131;6.7609;6.6837;5.3456;3.2802;2.6128;2.1257;1.4821 -;-;-;-;-;-;-;-;-;- 791 + 1 1.535 84632.4 1.0 2529 5437 7960 SUDHL4_400M_050219_2,7968 SUDHL4_400M_050219_2,7968,LSDPVHLTV True True LSDPVHLTV 42.621829 490.775592029095 687893.6875 7960.0 nc|ENSG00000072694|P31994-3|FCGR2B;;ENSG00000143226|ENST00000271450|FCGR2A;;ENST00000480308.5_1_1:161633004-161643868:+|nuORF;;nc|ENSG00000244682|P31995-3|FCGR2C;;nc|ENSG00000072694|P31994-5|FCGR2B;;ENST00000485778.1_1_1:161633004-161641486:+|nuORF;;nc|ENSG00000244682|P31995|FCGR2C;;nc|ENSG00000244682|P31995-2|FCGR2C;;nc|ENSG00000244682|P31995-4|FCGR2C;;nc|ENSG00000143226|P12318-2|FCGR2A;;nc|ENSG00000072694|P31994-4|FCGR2B;;nc|ENSG00000072694|P31994-2|FCGR2B;;ENST00000473530.6_1_1:161559398-161565518:+|nuORF;;ENST00000467654.1_1_1:161475257-161480016:+|nuORF;;ENST00000465075.6_1_1:161559398-161559893:+|nuORF;;ENSG00000072694|ENST00000358671|FCGR2B 5.18780787785848 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7970 42.626 90.0 546840.0 25 0 110160.0 1168 AHLKGVITY 9 73 501.2904592618345 1000.566365590469 2 501.2908203005791 MULTI CID FTMS 0 0 0 7969 751092.1875 0.7375681381194419 12 -0.4912223815917969 1 Unmodified _AHLKGVITY_ ENSG00000205221|ENST00000379242|VIT;nc|ENSG00000205221|Q6UXI7-2|VIT;nc|ENSG00000205221|Q6UXI7-5|VIT;nc|ENSG00000205221|Q6UXI7|VIT 2.302733041254933 0.8342969208511092 6 Y 1 8 10.837 0.0 0.0 1.0831 0.0 0.0 819.4926789223034 0.0 819.4926789223034 0.0 7.342605414788723 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.0831 + + 5 + 1 1.535 42352.0 1.0 2530 5438 7969 SUDHL4_400M_050219_2,7970 SUDHL4_400M_050219_2,7970,AHLKGVITY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7971 42.64 800.0 74758.0 25 0 3680.7 + 41918 VQGIFVEKY 9 107 541.7975697016182 1081.5805864700362 2 541.7974731326103 MULTI CID FTMS 0 0 0 7969 48704.5390625 0.1747350293369186 3 -0.089599609375 2 Unmodified _VQGIFVEKY_ ENSG00000116473|ENST00000369709|RAP1A;ENSG00000127314|ENST00000250559|RAP1B;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;nc|ENSG00000127314|P61224-2|RAP1B;nc|ENSG00000127314|P61224-3|RAP1B;nc|ENSG00000254893|A6NIZ1|RAP1BL 38.17557092003332 0.0854718145212029 6 {[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}{M(Oxidation (M))|F}VEKY 9 0 + 47.004 0.0 0.0 4.3458 4.3458 86.57 0.0 0.0 0.0 26.59128493324792 9.973024840566469 9.973024840566469 22.998037644757044 0 0.6435078169319297 1.2218487496163564 0.4247425010840047 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}{M(Oxidation (M))|F}VEKY;{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}[HM]VW{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[WK]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[HK];{[QV]|[N{I|L}]|[RA]|[KV]}[WK][QT][RH];{[QV]|[N{I|L}]|[RA]|[KV]}G{I|L}{M(Oxidation (M))|F}[WH]PV;{[QV]|[N{I|L}]|[RA]|[KV]}GKKEE[HK];{[QV]|[N{I|L}]|[RA]|[KV]}A[QP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HK];{[TV]|[{I|L}S]}GY[RP]P[RH];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}Y[RP]P[RH];[{I|L}T]AA[{I|L}A]EE[HK] 4.3458;2.2195;1.9773;1.699;1.4158;1.3734;1.2106;1.0472;0.541;0.34106 +;-;-;-;-;-;-;-;-;- + 536 + 1 1.535 54257.1 0.6200000047683716 2531 5438 7969 SUDHL4_400M_050219_2,7971 SUDHL4_400M_050219_2,7971,VQGIFVEKY True True VQGIFVEKY 42.640092 541.79747313261 1618724.0 7969.0 nc|ENSG00000254893|A6NIZ1|RAP1BL;;nc|ENSG00000127314|P61224-3|RAP1B;;ENSG00000127314|ENST00000250559|RAP1B;;ENST00000460800.5_1_12:69042504-69044290:+|nuORF;;ENST00000494982.1_1_1:112233982-112249293:+|nuORF;;nc|ENSG00000127314|P61224-2|RAP1B;;ENSG00000116473|ENST00000369709|RAP1A 3.406196355819702 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7972 42.641 31.0 1325800.0 25 0 145280.0 + 16196 IVIDPKNPL 9 63 504.8080262794294 1007.6014996256588 2 504.8083373904228 MULTI CID FTMS 0 0 0 7969 1565013.875 1.0 0 0.0 3 Unmodified _IVIDPKNPL_ ENSG00000004897|ENST00000066544|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;nc|ENSG00000004897|P30260-2|CDC27 21.74664581756881 0.2544899275067181 6 [{I|L}V]{NN|[MP]|[D{I|L}]|[EV]}[KP]N[{I|L}P] 9 0 + 24.26 0.0 0.0 2.4077 2.4077 82.209 0.0 0.0 0.0 10.28057953006423 0.4573267089649633 0.4573267089649633 24.259979616784605 0 0.0 2.0 0.0 0.2887254899964357 + + [{I|L}V]{NN|[MP]|[D{I|L}]|[EV]}[KP]N[{I|L}P] 2.4077 + + 199 + 1 1.535 36844.1 1.0 2532 5438 7969 SUDHL4_400M_050219_2,7972 SUDHL4_400M_050219_2,7972,IVIDPKNPL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7973 42.643 80.0 663330.0 25 0 117860.0 + 9224 FGIDRPAEL 9 75 509.27181982793405 1016.529086722668 2 509.2720825076103 MULTI CID FTMS 0 0 0 7969 459306.59375 0.3158602163246946 -3 0.1987457275390625 4 Unmodified _FGIDRPAEL_ ENSG00000105705|ENST00000247001|SUGP1;ENST00000588731.6_1_19:19387459-19414804:-|nuORF;ENST00000589144.5_1_19:19387459-19413207:-|nuORF;ENST00000592188.1_1_19:19387459-19391209:-|nuORF 38.61474834105838 0.0830609365873449 6 {[QN]|[E{I|L}]|[KN]}[VS]RD{I|L}GE 9 8 + 51.929 0.0 0.0 5.1084 5.1084 80.035 0.0 0.0 0.0 0.915149811213496 16.52249673628745 0.915149811213496 3.7628749457997657 0 0.8807196863200843 0.0 0.4247425010840047 0.0 {[QN]|[E{I|L}]|[KN]}[VS]RD{I|L}GE;{[QN]|[E{I|L}]|[KN]}[VS]RDG{I|L}E;{[QN]|[E{I|L}]|[KN]}[VS]RDGE{I|L};{M(Oxidation (M))|F}G{I|L}DR[{I|L}P]{[CP]|[EA]};{M(Oxidation (M))|F}{I|L}GDR[{I|L}P]{[CP]|[EA]};{[QN]|[E{I|L}]|[KN]}[VS]RDW{I|L};{[QN]|[E{I|L}]|[KN]}[VS][VG]D{I|L}W;{[QN]|[E{I|L}]|[KN]}[VS][VG]DW{I|L};{[QN]|[E{I|L}]|[KN]}[QA]{M(Oxidation (M))|F}[PA]{I|L}E;{[QN]|[E{I|L}]|[KN]}[VS]R{[RE]|[WV]}E 5.1084;4.7383;4.4421;4.2771;3.9069;3.6831;3.56;2.772;2.1238;2.013 -;-;-;-;-;-;-;-;-;- 118 1 1.535 45394.1 1.0 2533 5438 7969 SUDHL4_400M_050219_2,7973 SUDHL4_400M_050219_2,7973,FGIDRPAEL True True FGIDRPAEL 42.643085 509.27208250761 12945439.0 7969.0 ENSG00000105705|ENST00000247001|SUGP1;;ENST00000588731.6_1_19:19387459-19414804:-|nuORF;;ENST00000589144.5_1_19:19387459-19413207:-|nuORF;;ENST00000592188.1_1_19:19387459-19391209:-|nuORF 6.070237000783284 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7974 42.646 152.0 352410.0 25 0 41483.0 + 37271 TIPEAFRGV 9 66 495.27427372909455 988.5339945249892 2 495.2746459841728 MULTI CID FTMS 0 0 0 7969 332390.8125 0.6913029888982776 -4 0.2284431457519531 5 Unmodified _TIPEAFRGV_ ENSG00000213719|ENST00000375784|CLIC1 13.042465956692816 0.4836390050082244 6 [{I|L}T]PEAV 6 3 47.396 0.0 0.0 4.7946 0.0 0.0 0.0 375.17353235416255 375.17353235416255 26.22486274231747 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 [{I|L}T]PEAV 4.7946 - 77 + 1 1.535 48673.7 1.0 2534 5438 7969 SUDHL4_400M_050219_2,7974 SUDHL4_400M_050219_2,7974,TIPEAFRGV False True TIPEAFRGV 42.646112 495.274645984173 3502286.75 7969.0 ENSG00000213719|ENST00000375784|CLIC1 2.084410826365153 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7976 42.652 196.0 389110.0 25 0 33425.0 + 13472 HLTDITLKV 9 107 520.3109025639412 1038.6072521946824 2 520.3124877810478 MULTI CID FTMS 0 0 0 7975 152714.796875 0.6928554222692361 1 -0.0097694396972656 1 Unmodified _HLTDITLKV_ ENSG00000065427|ENST00000302445|KARS1;ENST00000565738.1_1_16:75674022-75675473:-|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;nc|ENSG00000065427|Q15046-2|KARS1 52.268347100219714 0.0353964759249114 6 [{I|L}T][HD]{I|L}T{I|L}KV 9 2 + 49.688 0.0 0.0 4.7841 4.7841 74.127 0.0 0.0 0.0 0.4710624853235146 6.324995917031941 0.4710624853235146 0.4710624853235146 0 0.6791746928241126 2.0 1.055462187404089 0.0 [{I|L}T][HD]{I|L}T{I|L}KV;[H{I|L}]{[ES]|[DT]|[{I|L}C]}{I|L}T{I|L}KV;{[QN]|[E{I|L}]|[KN]}[HS]{I|L}T{I|L}KV;[{I|L}T]{[ES]|[DT]|[{I|L}C]}[H{I|L}]{I|L}KV;[{I|L}V][Y{M(Oxidation (M))|F}]GT{I|L}KV;{[QS]|[NT]}V[HK]T{I|L}KV;{[QN]|[E{I|L}]|[KN]}{[MG]|[TS]}[H{I|L}]{I|L}KV;[VP]H[{M(Oxidation (M))|F}V]T{I|L}KV 4.7841;4.7388;3.8666;2.8805;2.411;1.9774;1.963;1.3731 -;+;-;-;-;-;-;- + 303 1 1.535 61300.0 1.0 2535 5439 7975 SUDHL4_400M_050219_2,7976 SUDHL4_400M_050219_2,7976,HLTDITLKV True True HLTDITLKV 42.652071 520.312487781048 1098794.0 7975.0 nc|ENSG00000065427|Q15046-2|KARS1;;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;;ENST00000565738.1_1_16:75674022-75675473:-|nuORF;;ENSG00000065427|ENST00000302445|KARS1 4.197358767191569 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7977 42.656 196.0 289640.0 25 0 22552.0 + 43491 WWQWWIWWWW 10 74 874.9028227946941 1747.791092656188 2 875.3978149294853 MULTI CID FTMS 0 0 0 7975 190491.09375 0.0337835583518102 24 -0.7627296447753906 2 Unmodified _WWQWWIWWWW_ REV__chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.4583401331227399 0.7245164002484112 6 [NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ANNNP{[QN]|[E{I|L}]|[KN]} 15 -1 + 63.682 0.0 0.0 3.6435 3.6435 71.194 0.0 0.0 0.0 14.250639626393102 41.15920151602506 14.250639626393102 0.796896906561031 0 0.3807196863200844 0.958607314841775 0.0 0.4247425010840047 [NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ANNNP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}D[YV][{M(Oxidation (M))|F}E]ANNNP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}D[YV][{M(Oxidation (M))|F}E]AD{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W{I|L}NP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}D[YV][{M(Oxidation (M))|F}E]AN{I|L}DP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ANNNV[HC];[NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}ANNGGP{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AGGNNP{[QN]|[E{I|L}]|[KN]} 3.6435;3.598;3.4713;3.3305;3.2849;3.2152;3.1582;3.1275;3.1268;3.1268 -;-;-;-;-;-;-;-;-;- 1123 1 1.535 44424.2 1.0 2536 5439 7975 SUDHL4_400M_050219_2,7977 SUDHL4_400M_050219_2,7977,WWQWWIWWWW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7979 42.673 800.0 209080.0 25 0 39541.0 + 43918 YGGHSCSS 8 135 399.1473224401505 796.2800919471009 2 399.1477538943291 MULTI CID FTMS 0 0 0 7978 95147.453125 0.3226368533248391 1 -0.0555419921875 1 Unmodified _YGGHSCSS_ REV__ENSG00000240432|ENST00000390690|KRTAP13-3 0.0 0.8243325171867699 6 P 1 -1 8.5835 0.0 0.0 1.0779 0.0 0.0 681.2162777154588 0.0 681.2162777154588 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 P 1.0779 - 14 + 1 1.525 131961.0 0.9200000166893004 2537 5440 7978 SUDHL4_400M_050219_2,7979 SUDHL4_400M_050219_2,7979,YGGHSCSS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7980 42.687 800.0 124790.0 25 0 14760.0 37756 TLRLSEKFI 9 125 553.830297646023 1105.646042358846 2 553.8298828005791 MULTI CID FTMS 0 0 0 7978 145489.25 0.6496352717737037 -4 0.1425743103027343 2 Unmodified _TLRLSEKFI_ ENSG00000198162|ENST00000356554|MAN1A2;ENST00000482811.1_1_1:117910805-117957398:+|nuORF 7.289230182591677 0.6602208344931196 6 Y 1 9 10.837 0.0 0.0 0.98019 0.0 0.0 924.5712417990788 0.0 924.5712417990788 0.0 0.9226221329627204 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.98019 - 150 + 1 1.525 80966.6 0.6600000262260437 2538 5440 7978 SUDHL4_400M_050219_2,7980 SUDHL4_400M_050219_2,7980,TLRLSEKFI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7981 42.701 800.0 137980.0 25 0 14749.0 + 15046 ILYDKDHYK 9 110 597.8115176665166 1193.608482399833 2 597.8116332888603 MULTI CID FTMS 0 0 0 7978 97966.375 0.429956325116031 -1 0.0097694396972656 3 Unmodified _ILYDKDHYK_ ENSG00000107937|ENST00000360803|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4 32.30548876998284 0.1201446275138228 6 {I|L}{I|L}YTS{[QG]|[NA]}HY{I|L} 10 5 + 88.886 0.0 0.0 7.4468 7.4468 94.086 0.0 0.0 0.0 38.57235609988666 9.645973358261145 9.645973358261145 12.282257798011583 0 1.1989700043360187 2.0 1.5044321917401078 0.0 {I|L}{I|L}YTS{[QG]|[NA]}HY{I|L};{I|L}{I|L}YTS{[QG]|[NA]}{[RE]|[WV]}Q;{I|L}{I|L}YTYY{I|L}[{M(Oxidation (M))|F}V];{I|L}{I|L}Y[QP]P{[MG]|[TS]}Y{I|L};{I|L}{I|L}Y[QP]{[DS]|[MA]|[CV]|TT}{I|L}[{M(Oxidation (M))|F}V];[YT][{M(Oxidation (M))|F}V]YY{I|L}{I|L}{I|L};{I|L}{I|L}Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{[QV]|[N{I|L}]|[RA]|[KV]}[WE];{[WN]|[YH]}{[QG]|[NA]}STY{I|L}{I|L}{I|L};[YT][{M(Oxidation (M))|F}V]Y{I|L}Y{I|L}{I|L};{[WN]|[YH]}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}EY{I|L}{I|L}{I|L} 7.4468;6.4178;5.829;5.0167;4.3495;4.2596;3.9247;3.8204;3.7515;3.6729 -;-;-;-;-;-;-;-;-;- 824 + 1 1.525 84703.3 0.5400000214576721 2539 5440 7978 SUDHL4_400M_050219_2,7981 SUDHL4_400M_050219_2,7981,ILYDKDHYK True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7982 42.711 602.0 157850.0 25 0 18470.0 + -1 LAPRMQIV 8 109 472.2753330723413 942.5361132114826 2 472.2696716189384 MULTI CID FTMS 0 0 0 7978 92374.640625 0.0937605266900717 20 -0.6826362609863281 4 Oxidation (M) _LAPRM(Oxidation (M))QIV_ REV__ENSG00000125675|ENST00000620443|GRIA3;REV__ENST00000479118.1_1_X:122318417-122387488:+|nuORF;REV__nc|ENSG00000125675|P42263|GRIA3 11.114462752807354 0.7467182956244686 6 [{I|L}A]P 3 -1 22.676 0.0 0.0 2.4059 0.0 0.0 0.0 658.3381511355639 658.3381511355639 9.73728311114658 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]P 2.4059 + + 152 1 1.525 78748.7 1.0 2540 5440 7978 SUDHL4_400M_050219_2,7982 SUDHL4_400M_050219_2,7982,LAPRMQIV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7984 42.722 477.0 163120.0 25 0 22845.0 + 33596 SIPFAIRIE 9 94 523.3035751559308 1044.5925973786616 2 523.3053466677666 MULTI CID FTMS 0 0 0 7983 115760.9453125 0.0986341066964628 -11 0.4361648559570312 1 Unmodified _SIPFAIRIE_ REV__ENST00000580291.5_1_17:21121544-21121697:+|nuORF 3.5964929083625545 0.7891324200061827 6 {I|L} 1 -1 10.485 0.0 0.0 1.0037 0.0 0.0 913.4977009936993 0.0 913.4977009936993 0.0 0.8068400111748719 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0037 + + 12 + 1 1.525 65975.9 1.0 2541 5441 7983 SUDHL4_400M_050219_2,7984 SUDHL4_400M_050219_2,7984,SIPFAIRIE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7985 42.736 800.0 119060.0 25 0 12535.0 + 13490 HLYDIHVTV 9 119 548.7929140353195 1095.571275137439 2 548.7943603396416 MULTI CID FTMS 0 0 0 7983 87937.375 0.6894009234653642 -3 0.089599609375 2 Unmodified _HLYDIHVTV_ ENSG00000213965|ENST00000397061|NUDT19 39.957323273325 0.0756908302845263 6 [H{I|L}]V[YE]HVTV 9 3 + 56.065 0.0 0.0 5.1174 5.1174 57.691 0.0 0.0 0.0 14.771212547196626 13.455364353722018 13.455364353722018 0.0 0 0.8684151806525389 1.6989700043360187 0.4247425010840047 0.0 [H{I|L}]V[YE]HVTV;[H{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}HVTV;[H{I|L}]V[YE]VHTV;[H{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}VHTV;[H{I|L}]VDY{I|L}HTV;[H{I|L}]VD[WQ]VTV;[H{I|L}]V[YT]H{NN|[MP]|[D{I|L}]|[EV]}V;[H{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}{I|L}HG{[QN]|[E{I|L}]|[KN]};[H{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}V{I|L}HTV;{NN|[MP]|[D{I|L}]|[EV]}{[WN]|[YH]}{I|L}HVTV 5.1174;5.1174;4.6819;4.6819;4.6575;4.0918;3.9299;3.8893;3.8588;3.7692 -;+;-;-;-;-;-;-;-;- + 603 1 1.525 78344.8 0.5400000214576721 2542 5441 7983 SUDHL4_400M_050219_2,7985 SUDHL4_400M_050219_2,7985,HLYDIHVTV True True HLYDIHVTV 42.735895 548.794360339642 816882.25 7983.0 ENSG00000213965|ENST00000397061|NUDT19 5.55802043279012 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7986 42.746 571.0 148690.0 25 0 13715.0 + 33962 SLIDTVRSY 9 124 527.2839681731493 1052.5533834130986 2 527.2837402224541 MULTI CID FTMS 0 0 0 7983 86095.15625 1.0 0 0.0 3 Unmodified _SLIDTVRSY_ ENSG00000023330|ENST00000484952|ALAS1 29.84058131909904 0.1515068451768857 6 {[TV]|[{I|L}S]}{I|L}DT 5 4 49.542 0.0 0.0 4.7069 0.0 0.0 0.0 520.2532442682249 520.2532442682249 27.89485843249713 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.3054621874040891 0.0 + {[TV]|[{I|L}S]}{I|L}DT 4.7069 + + 388 + 1 1.525 71274.3 1.0 2543 5441 7983 SUDHL4_400M_050219_2,7986 SUDHL4_400M_050219_2,7986,SLIDTVRSY False True SLIDTVRSY 42.745908 527.283740222454 526996.0 7983.0 ENSG00000023330|ENST00000484952|ALAS1 3.79295015335083 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7988 42.763 800.0 131420.0 25 0 15468.0 + 15141 INTIPAPSAPV 11 149 540.3082018578756 1078.601850782551 2 540.3088867068291 MULTI CID FTMS 0 0 0 7987 76473.0859375 0.4779413847014696 1 -0.0483970642089843 1 Unmodified _INTIPAPSAPV_ ENSG00000186628|ENST00000334574|FSD2;nc|ENSG00000186628|A1L4K1-2|FSD2 21.53697664764585 0.586507868110548 6 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]TQT 7 7 47.056 0.0 0.0 4.3627 0.0 0.0 0.0 304.16718469791255 304.16718469791255 19.780929143502632 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 1.5356668758921828 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]TQT 4.3627 - 1430 + 1 1.514 87186.8 0.6899999976158142 2544 5442 7987 SUDHL4_400M_050219_2,7988 SUDHL4_400M_050219_2,7988,INTIPAPSAPV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7989 42.767 159.0 379710.0 25 0 76445.0 + 37173 TIDPIPHQL 9 82 517.2872889058215 1032.5600248784428 2 517.2877685427666 MULTI CID FTMS 0 0 0 7987 247935.375 0.9064502013652852 -2 0.0901412963867187 2 Unmodified _TIDPIPHQL_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 41.8396318013385 0.0653578398400075 6 [{I|L}T]DP{I|L}PHQ{I|L} 9 0 + 69.287 0.0 0.0 6.7103 6.7103 92.905 0.0 0.0 0.0 46.584451619883 14.46223812018313 14.46223812018313 15.955612550363789 0 0.8494850021680094 2.0 0.0 0.6747425010840047 + + [{I|L}T]DP{I|L}PHQ{I|L};[{I|L}T]DP{I|L}PH[AG]{I|L};[{I|L}T][{M(Oxidation (M))|F}V]P{I|L}CQ{I|L};[{I|L}P]WP{I|L}PD[VP];[{I|L}T][{M(Oxidation (M))|F}V]P{I|L}C[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HK]{I|L}PD[VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}Q{I|L}P[{M(Oxidation (M))|F}V][VP];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[AG]{I|L}P[{M(Oxidation (M))|F}V][VP] 6.7103;5.165;5.0661;4.1921;3.5208;2.8888;2.5282;1.2979 +;-;-;-;-;-;-;- + 148 + 1 1.514 52413.5 1.0 2545 5442 7987 SUDHL4_400M_050219_2,7989 SUDHL4_400M_050219_2,7989,TIDPIPHQL True True TIDPIPHQL 42.766516 517.287768542767 2266108.0 7987.0 ENSG00000125885|ENST00000610722|MCM8;;nc|ENSG00000125885|Q9UJA3-4|MCM8;;nc|ENSG00000125885|Q9UJA3-3|MCM8;;nc|ENSG00000125885|Q9UJA3-2|MCM8 8.355350653330484 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7990 42.78 800.0 112270.0 25 0 7235.0 -1 0 97 925.4267131055695 1848.838873277939 2 925.4276000857352 MULTI CID FTMS 0 0 0 7987 95927.2578125 0.7976029990476461 -1 0.0345993041992187 3 6 [NP]{I|L}N{M(Oxidation (M))|F}[H{I|L}]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 16 -1 + 75.18 0.0 0.0 4.0664 4.0664 74.874 0.0 0.0 0.0 2.286173591389172 2.286173591389172 2.286173591389172 2.286173591389172 0 0.8807196863200843 0.0 0.0 1.1861818737241734 [NP]{I|L}N{M(Oxidation (M))|F}[H{I|L}]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQ[H{I|L}][HS]Q{[QS]|[NT]};[NP]{I|L}N{M(Oxidation (M))|F}[H{I|L}]QWN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NWQ[H{I|L}][HS]Q{[QS]|[NT]};[NP]{I|L}N{M(Oxidation (M))|F}[H{I|L}]QDAGG{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[H{I|L}]QDAN{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[H{I|L}]QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[H{I|L}][AG]DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}GG{M(Oxidation (M))|F}[H{I|L}]QWN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[H{I|L}][AG]WN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.0664;3.9427;3.7035;3.5798;3.5788;3.5788;3.5788;3.5788;3.215;3.215 -;-;-;-;-;-;-;-;-;- 655 1 1.514 63831.0 0.5400000214576721 2546 5442 7987 SUDHL4_400M_050219_2,7990 SUDHL4_400M_050219_2,7990, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7991 42.794 800.0 162460.0 25 0 10389.0 + 19009 KEVNFTSEL 9 160 533.271836850181 1064.529120767162 2 533.7745239138603 MULTI CID FTMS 0 0 0 7987 83374.9140625 0.0417949667466494 -17 0.6423873901367188 4 Unmodified _LDKGNPFQF_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 16.942295170755138 0.3780752226737986 6 {[TV]|[{I|L}S]}EH{I|L}VQ 7 7 36.653 0.0 0.0 3.4431 0.0 0.0 0.0 255.0797548826494 255.0797548826494 6.655214291848907 0.0 0.0 0.0 0 0.0 2.0 0.4749073637206092 0.0 {[TV]|[{I|L}S]}EH{I|L}VQ 3.4431 - 4202 1 1.514 102665.4 0.5299999713897705 2547 5442 7987 SUDHL4_400M_050219_2,7991 SUDHL4_400M_050219_2,7991,LDKGNPFQF False False KEVNFTSEL 42.794195 533.77452391386 20651084.0 7987.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 1.0554237564404805 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7993 42.799 80.0 565880.0 25 0 79922.0 + 9775 FNIATNLLAL 10 64 545.3172057463412 1088.6198585594825 2 545.3174316287041 MULTI CID FTMS 0 0 0 7992 493759.34375 1.0 0 0.0 1 Unmodified _FNIATNLLAL_ REV__ENSG00000180269|ENST00000570682|GPR139 3.2813086475875832 0.7114585191678878 6 E 1 -1 6.9897 0.0 0.0 0.64207 0.0 0.0 428.2958349081436 528.2599191045879 956.5557540127317 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.64207 - 37 + 1 1.514 39827.5 1.0 2548 5443 7992 SUDHL4_400M_050219_2,7993 SUDHL4_400M_050219_2,7993,FNIATNLLAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7994 42.813 800.0 101820.0 25 0 9117.8 -1 0 80 1031.450255914786 3091.3289383445585 3 1032.119921863079 MULTI CID FTMS 0 0 0 7992 148468.25 0.2793943749272254 5 -0.2709846496582031 2 6 [QT]PGYAQT 8 -1 21.376 0.0 0.0 0.69149 0.0 0.0 0.0 2241.920771190514 2241.920771190514 2.832077448819799 0.0 0.0 0.0 0 0.0 0.0 0.8703715150305281 0.2396518287104437 [QT]PGYAQT 0.69149 - 3114 1 1.514 61667.9 0.7699999809265137 2549 5443 7992 SUDHL4_400M_050219_2,7994 SUDHL4_400M_050219_2,7994, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 7996 42.817 91.0 442230.0 25 0 54983.0 + 37937 TMADQIVTV 9 63 497.24988830797184 992.4852236827436 2 497.2502014040947 MULTI CID FTMS 0 0 0 7995 533169.875 0.962428292152842 1 -0.1072044372558593 1 Oxidation (M) _TM(Oxidation (M))ADQIVTV_ ENSG00000116266|ENST00000370008|STXBP3 43.85829265575387 0.0542763391141878 6 [{M(Oxidation (M))|F}T]ADQ{I|L} 6 3 35.195 0.0 0.0 3.5461 0.0 0.0 0.0 314.1739137083203 314.1739137083203 12.897379694713909 0.0 0.0 0.0 0 0.0 0.0 0.7742275032520141 0.3807196863200844 + [{M(Oxidation (M))|F}T]ADQ{I|L} 3.5461 + + 84 1 1.514 37652.3 1.0 2550 5444 7995 SUDHL4_400M_050219_2,7996 SUDHL4_400M_050219_2,7996,TMADQIVTV True False TMADQIVTV 42.817436 497.250201404095 3249095.25 7995.0 ENSG00000116266|ENST00000370008|STXBP3 6.546217600504558 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7997 42.824 355.0 185460.0 25 0 15088.0 + -1 GPMAPSYLV 9 97 475.73605643805263 949.4575599429052 2 475.7363769412041 MULTI CID FTMS 0 0 0 7995 128940.765625 0.8520940724377265 1 -0.1072044372558593 2 Oxidation (M) _GPM(Oxidation (M))APSYLV_ REV__ENSG00000165891|ENST00000322886|E2F7;REV__nc|ENSG00000165891|Q96AV8-3|E2F7 19.438996006549623 0.310492472477042 6 [Y{I|L}]P 3 -1 31.695 0.0 0.0 3.3382 0.0 0.0 0.0 573.2330416315061 573.2330416315061 18.19984993812689 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [Y{I|L}]P 3.3382 - 119 + 1 1.514 55915.4 1.0 2551 5444 7995 SUDHL4_400M_050219_2,7997 SUDHL4_400M_050219_2,7997,GPMAPSYLV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 7998 42.825 61.0 804930.0 25 0 84401.0 + 31010 RLFDEPQLA 9 62 544.791167328316 1087.5677817234318 2 544.7907592654228 MULTI CID FTMS 0 0 0 7995 574762.6875 0.5388379567921967 -2 0.0669746398925781 3 Unmodified _RLFDEPQLA_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1 8.155526934196011 0.6299788542272896 6 EPQ[{I|L}A] 5 4 26.466 0.0 0.0 2.4335 0.0 0.0 531.2807207618954 0.0 531.2807207618954 0.0 20.981362441963327 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 + EPQ[{I|L}A] 2.4335 + + 23 1 1.514 46257.7 1.0 2552 5444 7995 SUDHL4_400M_050219_2,7998 SUDHL4_400M_050219_2,7998,RLFDEPQLA False True RLFDEPQLA 42.825336 544.790759265423 42459243.0 7995.0 nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1;;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;;ENSG00000133243|ENST00000255608|BTBD2 5.149498462677002 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 7999 42.829 217.0 232360.0 25 0 20107.0 -1 AMNPTNTVF 9 98 505.73408218882594 1009.453611444452 2 505.7346374392509 MULTI CID FTMS 0 0 0 7995 199154.71875 0.0955723063069029 9 -0.3406829833984375 4 Oxidation (M) _AM(Oxidation (M))NPTNTVF_ ENSG00000109971|ENST00000534624|HSPA8;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;ENST00000443628.2_1_X:114011085-114011187:-|nuORF;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;ENST00000531063.1_1_11:122931759-122932032:-|nuORF;ENST00000532167.5_1_11:122930938-122932032:-|nuORF;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;ENST00000533238.5_1_11:122929516-122932032:-|nuORF;nc|ENSG00000109971|P11142-2|HSPA8 20.453626601364224 0.2830276176381075 6 TN{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4 -1 20.443 0.0 0.0 2.0251 0.0 0.0 482.2156486532394 0.0 482.2156486532394 0.0 9.95806193193042 0.0 0.0 0 0.0 0.0 0.2742275032520141 0.0 TN{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.0251 - 202 + 1 1.514 42647.6 1.0 2553 5444 7995 SUDHL4_400M_050219_2,7999 SUDHL4_400M_050219_2,7999,AMNPTNTVF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8000 42.838 458.0 245310.0 25 0 35842.0 + 18948 RLDDAIHVL 9 93 526.2983646028497 1050.5821762724993 2 526.2986938357353 MULTI CID FTMS 0 0 0 7995 161444.96875 0.8931789423528592 -1 0.0185775756835937 5 Unmodified _LDDIRAHVL_ nc|ENSG00000196628|P15884-6|TCF4;nc|ENSG00000196628|P15884-14|TCF4;nc|ENSG00000196628|P15884-7|TCF4;nc|ENSG00000140262|Q99081-2|TCF12;ENSG00000140262|ENST00000333725|TCF12;nc|ENSG00000196628|P15884-2|TCF4;nc|ENSG00000196628|P15884-16|TCF4;nc|ENSG00000196628|P15884-15|TCF4;nc|ENSG00000196628|P15884-4|TCF4;nc|ENSG00000196628|P15884-11|TCF4;nc|ENSG00000196628|P15884-9|TCF4;nc|ENSG00000196628|P15884|TCF4;nc|ENSG00000196628|P15884-13|TCF4;nc|ENSG00000196628|P15884-8|TCF4;nc|ENSG00000196628|P15884-10|TCF4;nc|ENSG00000140262|Q99081|TCF12;nc|ENSG00000196628|P15884-12|TCF4;ENSG00000196628|ENST00000354452|TCF4;ENST00000562680.5_1_18:52899738-53018213:-|nuORF;nc|ENSG00000140262|Q99081-4|TCF12;nc|ENSG00000196628|P15884-5|TCF4 18.373094154950223 0.3393451798331396 6 DA{I|L}HV{I|L} 6 4 54.073 0.0 0.0 5.147 0.0 0.0 384.21309096504064 0.0 384.21309096504064 0.0 34.49600975727897 0.0 0.0 0 1.142159058960253 0.0 0.0 0.0 DA{I|L}HV{I|L} 5.147 - 121 1 1.514 92588.4 1.0 2554 5444 7995 SUDHL4_400M_050219_2,8000 SUDHL4_400M_050219_2,8000,LDDIRAHVL False False RLDDAIHVL 42.837561 526.298693835735 1033002.5625 7995.0 nc|ENSG00000196628|P15884-6|TCF4;;nc|ENSG00000196628|P15884-14|TCF4;;nc|ENSG00000196628|P15884-7|TCF4;;nc|ENSG00000140262|Q99081-2|TCF12;;ENSG00000140262|ENST00000333725|TCF12;;nc|ENSG00000196628|P15884-2|TCF4;;nc|ENSG00000196628|P15884-16|TCF4;;nc|ENSG00000196628|P15884-15|TCF4;;nc|ENSG00000196628|P15884-4|TCF4;;nc|ENSG00000196628|P15884-11|TCF4;;nc|ENSG00000196628|P15884-9|TCF4;;nc|ENSG00000196628|P15884|TCF4;;nc|ENSG00000196628|P15884-13|TCF4;;nc|ENSG00000196628|P15884-8|TCF4;;nc|ENSG00000196628|P15884-10|TCF4;;nc|ENSG00000140262|Q99081|TCF12;;nc|ENSG00000196628|P15884-12|TCF4;;ENSG00000196628|ENST00000354452|TCF4;;ENST00000562680.5_1_18:52899738-53018213:-|nuORF;;nc|ENSG00000140262|Q99081-4|TCF12;;nc|ENSG00000196628|P15884-5|TCF4 5.92116133371989 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8001 42.848 583.0 190830.0 25 0 26096.0 + + 23977 KEIIPTSEF 9 143 531.81716351628 1061.6197740993598 2 531.8186523318291 MULTI CID FTMS 0 0 0 7995 121836.71875 0.2445824280940114 -13 0.5028800964355469 6 Unmodified _LVTGLRKEF_ nc|ENSG00000153827|Q14669-2|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;nc|ENSG00000153827|Q14669-4|TRIP12;nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12 12.531546534597751 0.4974689918368763 6 {[VA]|[{I|L}G]}S{I|L}{I|L} 5 -1 13.05 0.0 0.0 1.2293 0.0 0.0 0.0 575.2913798945348 575.2913798945348 1.060698551406393 0.0 0.0 0.0 0 0.0 1.154901959985743 0.4802046884880938 0.0 {[VA]|[{I|L}G]}S{I|L}{I|L} 1.2293 - 161 1 1.514 89381.7 1.0 2555 5444 7995 SUDHL4_400M_050219_2,8001 SUDHL4_400M_050219_2,8001,LVTGLRKEF False False KEIIPTSEF 42.84777 531.818652331829 1672031.75 7995.0 nc|ENSG00000153827|Q14669-2|TRIP12;;ENSG00000153827|ENST00000675903|TRIP12;;nc|ENSG00000153827|Q14669-4|TRIP12;;nc|ENSG00000153827|Q14669|TRIP12;;nc|ENSG00000153827|Q14669-3|TRIP12 -0.5388688643773397 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8002 42.862 800.0 164370.0 25 0 10483.0 + + -1 HSFGGGTGSGFTSL 14 123 656.3013762190633 1310.5881995049265 2 656.3021118044853 MULTI CID FTMS 0 0 0 7995 107484.8046875 0.878407791046278 -1 0.0185775756835937 7 Oxidation (M) _EKEIM(Oxidation (M))EESTSL_ ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000167553|ENST00000301072|TUBA1C;nc|ENSG00000183785|Q9NY65-2|TUBA8;chr2:219252230-219277814|45|11.58|0.35|5.03|-|ENST00000427737|TUBA4A,TUBA4A;ENSG00000167552|ENST00000301071|TUBA1A;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000127824|P68366-2|TUBA4A 29.84058131909904 0.3915366693542702 6 [HS]{M(Oxidation (M))|F}NGTGSG{M(Oxidation (M))|F}TS{I|L} 13 -1 + 79.471 0.0 0.0 6.0638 6.0638 78.258 0.0 0.0 0.0 8.394267761586008 8.750705792157305 8.394267761586008 0.3218468337140194 0 1.274227503252014 0.744727494896694 2.341129063296272 0.0 [HS]{M(Oxidation (M))|F}NGTGSG{M(Oxidation (M))|F}TS{I|L};[HS]{M(Oxidation (M))|F}GGGTGSG{M(Oxidation (M))|F}TS{I|L};[HS]{M(Oxidation (M))|F}GNTGSG{M(Oxidation (M))|F}TS{I|L};{[CT]|[{M(Oxidation (M))|F}G]}HSGGTGSG{M(Oxidation (M))|F}TS{I|L};{[CT]|[{M(Oxidation (M))|F}G]}HSNTGSG{M(Oxidation (M))|F}TS{I|L};[{M(Oxidation (M))|F}V]QYYSG{M(Oxidation (M))|F}TS{I|L};[HS]{M(Oxidation (M))|F}NGTGSGT{M(Oxidation (M))|F}S{I|L};[HS]{M(Oxidation (M))|F}GGGTGSGT{M(Oxidation (M))|F}S{I|L};[HS]{M(Oxidation (M))|F}GNTGSGT{M(Oxidation (M))|F}S{I|L};[HS]{M(Oxidation (M))|F}N{[QS]|[NT]}SG{M(Oxidation (M))|F}TS{I|L} 6.0638;6.0392;5.7602;5.4233;5.1442;5.1082;4.9324;4.9079;4.6288;4.5823 -;-;-;-;-;-;-;-;-;- 15673 1 1.514 100686.7 0.5299999713897705 2556 5444 7995 SUDHL4_400M_050219_2,8002 SUDHL4_400M_050219_2,8002,EKEIMEESTSL False False HSFGGGTGSGFTSL 42.861611 656.302111804485 902309.1875 7995.0 ENSG00000127824|ENST00000248437|TUBA4A;;ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000167553|ENST00000301072|TUBA1C;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;chr2:219252230-219277814|45|11.58|0.35|5.03|-|ENST00000427737|TUBA4A,TUBA4A;;ENSG00000167552|ENST00000301071|TUBA1A;;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000127824|P68366-2|TUBA4A 7.474260330200195 2.0 False 14.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8003 42.875 800.0 108610.0 25 0 12113.0 + 17307 KLSEIVREF 9 101 560.8215571937375 1119.6285614542749 2 560.8217651247978 MULTI CID FTMS 0 0 0 7995 99667.6796875 0.8642944383109792 1 -0.1072044372558593 8 Unmodified _KLSEIVREF_ ENSG00000102038|ENST00000371121|SMARCA1;ENSG00000153147|ENST00000283131|SMARCA5;nc|ENSG00000102038|P28370-2|SMARCA1;nc|ENSG00000102038|P28370|SMARCA1 28.49450938151212 0.1686335738423394 6 K{I|L}SE{I|L}V{[RE]|[WV]}{M(Oxidation (M))|F} 9 0 + 55.593 0.0 0.0 4.9653 4.9653 79.234 0.0 0.0 0.0 42.516581992763285 2.5849762380663464 2.5849762380663464 3.6505719321236327 0 1.0 0.0 0.4247425010840047 0.3807196863200844 + + K{I|L}SE{I|L}V{[RE]|[WV]}{M(Oxidation (M))|F};K{I|L}SE{I|L}V[MT]S{I|L};K{I|L}SE{I|L}V[MT]TV;K{I|L}SE{I|L}V[VS]{M(Oxidation (M))|F}V;K{I|L}SE{I|L}HH{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};K{I|L}SE[KG]RR{M(Oxidation (M))|F};K{I|L}S[WQ]RR{M(Oxidation (M))|F};K{I|L}[YR]{[{M(Oxidation (M))|F}H]|[RQ]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};K{I|L}S[R{I|L}]HHMV;K{I|L}S[R{I|L}][C(Carbamidomethyl (C))S]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.9653;4.6393;4.6142;4.4774;3.9898;3.4883;2.9097;2.2742;2.1077;2.098 +;-;-;-;-;-;-;-;-;- + 217 + 1 1.514 70088.8 0.5199999809265137 2557 5444 7995 SUDHL4_400M_050219_2,8003 SUDHL4_400M_050219_2,8003,KLSEIVREF False True KLSEIVREF 42.875444 560.821765124798 537294.9375 7995.0 nc|ENSG00000102038|P28370|SMARCA1;;nc|ENSG00000102038|P28370-2|SMARCA1;;ENSG00000102038|ENST00000371121|SMARCA1;;ENSG00000153147|ENST00000283131|SMARCA5 5.776224931081136 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8004 42.889 760.0 220830.0 25 0 32938.0 31660 RRGQVGPV 8 149 434.7598761673364 867.5051994014727 2 434.7585327029228 MULTI CID FTMS 0 0 0 7995 102978.7265625 0.2479983878279884 -2 0.0669746398925781 9 Unmodified _RRGQVGPV_ ENST00000462875.1_1_6:31609004-31609235:-|nuORF 0.7936320650641473 0.8195151834710337 6 {I|L} 1 8 7.993 0.0 0.0 0.92138 0.0 0.0 736.4103640516665 0.0 736.4103640516665 0.0 0.101016930441431 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.92138 - 11 + 1 1.514 132725.8 1.0 2558 5444 7995 SUDHL4_400M_050219_2,8004 SUDHL4_400M_050219_2,8004,RRGQVGPV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8005 42.904 800.0 99053.0 25 0 9217.0 + 17209 KLLEIQSLL 9 122 528.8368456545033 1055.6591383758066 2 528.8376953005791 MULTI CID FTMS 0 0 0 7995 84634.890625 0.7527221497211182 1 -0.1072044372558593 10 Unmodified _KLLEIQSLL_ ENSG00000170846|ENST00000635031|unknown;ENST00000307533.10_1_4:6675831-6676296:+|nuORF 47.594388314883695 0.0456443387682827 6 {I|L}{I|L}EKA{M(Oxidation (M))|F}{I|L} 7 5 50.795 0.0 0.0 4.8117 0.0 0.0 0.0 238.15612258895035 238.15612258895035 27.58414250825217 0.0 0.0 0.0 0 1.0629529932484498 2.0 1.1203715150305282 0.0 {I|L}{I|L}EKA{M(Oxidation (M))|F}{I|L} 4.8117 - 1906 1 1.514 65515.1 0.4199999868869781 2559 5444 7995 SUDHL4_400M_050219_2,8005 SUDHL4_400M_050219_2,8005,KLLEIQSLL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8006 42.906 98.0 498420.0 25 0 78029.0 + 18032 KSLPHGGR 8 79 426.2461837590248 850.4778145848496 2 426.2461120486259 MULTI CID FTMS 0 0 0 7995 207354.015625 0.280030295794419 -2 0.0669746398925781 11 Unmodified _KSLPHGGR_ REV__ENSG00000173992|ENST00000533244|CCS;REV__ENST00000530961.5_1_11:66372641-66373323:+|nuORF 2.302733041254933 0.8103549651115762 6 {M(Oxidation (M))|F} 1 -1 11.109 0.0 0.0 1.3062 0.0 0.0 685.4315327018403 0.0 685.4315327018403 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.3062 - 3 + 1 1.514 42921.4 1.0 2560 5444 7995 SUDHL4_400M_050219_2,8006 SUDHL4_400M_050219_2,8006,KSLPHGGR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8007 42.92 800.0 108450.0 25 0 14679.0 -1 0 80 987.13162338229 2958.37304074707 3 987.8004638552666 MULTI CID FTMS 0 0 0 7995 134002.015625 1.0 0 0.0 12 6 VGVV 4 -1 16.542 0.0 0.0 0.55917 0.0 0.0 1989.816474440232 611.3050020807249 2601.121476520957 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VGVV 0.55917 - 112 + 1 1.514 65264.9 0.4699999988079071 2561 5444 7995 SUDHL4_400M_050219_2,8007 SUDHL4_400M_050219_2,8007, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8009 42.926 96.0 395240.0 25 0 37019.0 + 9225 FGIDRPAEL 9 67 509.27181982793405 1016.529086722668 2 509.2718994021416 MULTI CID FTMS 0 0 0 8008 161822.0 0.1112832531072165 4 -0.1773033142089843 1 Unmodified _FGIDRPAEL_ ENSG00000105705|ENST00000247001|SUGP1;ENST00000588731.6_1_19:19387459-19414804:-|nuORF;ENST00000589144.5_1_19:19387459-19413207:-|nuORF;ENST00000592188.1_1_19:19387459-19391209:-|nuORF 22.736283301280096 0.2418982879461534 6 {I|L}GE 3 7 29.693 0.0 0.0 2.921 0.0 0.0 699.3567474347566 0.0 699.3567474347566 0.0 17.91000098699497 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 {I|L}GE 2.921 - 13 1 1.514 33286.5 1.0 2562 5445 8008 SUDHL4_400M_050219_2,8009 SUDHL4_400M_050219_2,8009,FGIDRPAEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8010 42.928 86.0 468770.0 25 0 73507.0 + 42342 KVWGNVVTV 9 80 501.2904592618345 1000.566365590469 2 501.2912780642509 MULTI CID FTMS 0 0 0 8008 462919.625 0.4545843660638531 19 -0.5535354614257812 2 Unmodified _VTAQRQVTV_ ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-4|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR 10.823927491677226 0.5436922275383211 6 TV 2 7 13.927 0.0 0.0 1.3919 0.0 0.0 782.4395783363659 0.0 782.4395783363659 0.0 3.262426195346947 0.0 0.0 0 0.0 0.0 0.25 0.0 + TV 1.3919 + + 31 + 1 1.514 35509.1 1.0 2563 5445 8008 SUDHL4_400M_050219_2,8010 SUDHL4_400M_050219_2,8010,VTAQRQVTV False False KVWGNVVTV 42.92774 501.291278064251 8271801.0 8008.0 ENSG00000125944|ENST00000302271|HNRNPR;;nc|ENSG00000125944|O43390-4|HNRNPR;;nc|ENSG00000125944|O43390-3|HNRNPR;;nc|ENSG00000125944|O43390-2|HNRNPR 0.2586586972077687 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8011 42.93 97.0 624460.0 25 0 109490.0 + 37885 TLVYHVVGV 9 71 493.7861167870489 985.5576806408978 2 493.7871581912041 MULTI CID FTMS 0 0 0 8008 424590.21875 0.4039394217235177 -2 0.1257820129394531 3 Unmodified _TLVYHVVGV_ ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3 38.15118350030904 0.0856056900103839 6 [{I|L}T]VYH{I|L}{I|L}Q 8 4 + 34.843 0.0 0.0 3.5354 3.5354 76.867 0.0 0.0 0.0 5.969100130080562 5.969100130080562 5.969100130080562 5.969100130080562 0 0.6989700043360187 2.0 0.0 0.5 [{I|L}T]VYH{I|L}{I|L}Q;[{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}TVR;[{I|L}T]VYH{I|L}{I|L}GA;{[WN]|[YH]}VV{I|L}TVR;[{I|L}T]VYH{I|L}AAV;[HV]YV{I|L}TVR;[VG]{[QD]|[EN]|[WG]|[KD]|[RS]}V{I|L}TVR;[HV]VY{I|L}TVR;{[WN]|[YH]}V[{I|L}T]VVR;[VG][WK]VCVPV 3.5354;2.9297;2.5224;2.372;2.199;1.7611;1.4885;1.4556;1.3054;1.1169 -;-;-;-;-;-;-;-;-;- 190 + 1 1.514 52670.8 1.0 2564 5445 8008 SUDHL4_400M_050219_2,8011 SUDHL4_400M_050219_2,8011,TLVYHVVGV True True TLVYHVVGV 42.929838 493.787158191204 11189008.0 8008.0 nc|ENSG00000189091|Q15393-2|SF3B3;;ENSG00000189091|ENST00000302516|SF3B3 6.344786167144775 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8012 42.933 131.0 392680.0 25 0 50534.0 + 17222 KLLGELHTL 9 84 512.3134088058559 1022.612264678512 2 512.3136474490166 MULTI CID FTMS 0 0 0 8008 381885.8125 1.0 0 0.0 4 Unmodified _KLLGELHTL_ ENSG00000078674|ENST00000325083|PCM1;nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-3|PCM1;nc|ENSG00000078674|Q15154-4|PCM1;nc|ENSG00000078674|Q15154-5|PCM1 56.17704186161178 0.0281986971544335 6 [K{I|L}]{I|L}[W{I|L}]HT{I|L} 8 2 [K{I|L}] + + 35.743 17.945 7.4406 3.4953 3.4953 52.704 0.0 0.0 0.0 0.0 -3.637533090941446 -3.637533090941446 0.0 0 1.642159058960253 0.0 1.305462187404089 0.0 [K{I|L}]{I|L}[W{I|L}]HT{I|L} 3.4953 - 224 + 1 1.514 43778.6 1.0 2565 5445 8008 SUDHL4_400M_050219_2,8012 SUDHL4_400M_050219_2,8012,KLLGELHTL True True KLLGELHTL 42.932517 512.313647449017 2091553.625 8008.0 ENSG00000078674|ENST00000325083|PCM1;;nc|ENSG00000078674|Q15154-4|PCM1;;nc|ENSG00000078674|Q15154-5|PCM1;;nc|ENSG00000078674|Q15154-3|PCM1;;nc|ENSG00000078674|Q15154-2|PCM1 3.874082008997599 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8013 42.935 121.0 496870.0 25 0 64470.0 + 40457 VILPTVHEV 9 75 503.799930764226 1005.585308595252 2 503.8003723025322 MULTI CID FTMS 0 0 0 8008 377049.375 0.6378879959532406 -2 0.1257820129394531 5 Unmodified _VILPTVHEV_ ENSG00000174839|ENST00000311128|DENND6A;ENST00000487662.1_1_3:57643405-57651906:-|nuORF 42.09456458481378 0.0639583784996157 6 [{I|L}V]{I|L}PTV[HD]{I|L} 9 2 + 60.549 0.0 0.0 6.0213 6.0213 92.676 0.0 0.0 0.0 43.70938512956245 5.410810659303863 5.410810659303863 31.68243764792421 0 0.8494850021680094 2.0 0.8494850021680094 0.0 [{I|L}V]{I|L}PTV[HD]{I|L};[{I|L}V]{I|L}HH{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L};[{I|L}V]HH{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L} 6.0213;2.8706;1.4993 -;-;- 195 + 1 1.514 52110.3 1.0 2566 5445 8008 SUDHL4_400M_050219_2,8013 SUDHL4_400M_050219_2,8013,VILPTVHEV True True VILPTVHEV 42.935006 503.800372302532 8451944.0 8008.0 ENST00000487662.1_1_3:57643405-57651906:-|nuORF;;ENSG00000174839|ENST00000311128|DENND6A 6.789413770039876 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8014 42.938 136.0 247170.0 25 0 26418.0 + 15995 ITDQKKWL 8 70 516.2962701045436 1030.5779872758872 2 516.2963744997978 MULTI CID FTMS 0 0 0 8008 325779.125 0.6443455665429124 -8 0.3636016845703125 6 Unmodified _ITDQKKWL_ REV__ENSG00000134759|ENST00000358232|ELP2;REV__ENST00000541294.1_1_18:33739943-33744659:+|nuORF;REV__nc|ENSG00000134759|Q6IA86-2|ELP2;REV__nc|ENSG00000134759|Q6IA86-3|ELP2;REV__nc|ENSG00000134759|Q6IA86-4|ELP2;REV__nc|ENSG00000134759|Q6IA86-5|ELP2;REV__nc|ENSG00000134759|Q6IA86-6|ELP2;REV__nc|ENSG00000134759|Q6IA86-7|ELP2 5.230669730166228 0.792582437072536 6 [{I|L}T]D 3 -1 24.437 0.0 0.0 2.3712 0.0 0.0 0.0 698.3966877976246 698.3966877976246 11.717042969019287 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T]D 2.3712 + + 47 1 1.514 32019.5 1.0 2567 5445 8008 SUDHL4_400M_050219_2,8014 SUDHL4_400M_050219_2,8014,ITDQKKWL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8015 42.941 158.0 226810.0 25 0 15886.0 + 43549 WWWWIWWQWW 10 53 874.9028227946941 1747.791092656188 2 875.8990966677666 MULTI CID FTMS 0 0 0 8008 263804.28125 0.0843392920569853 30 -0.8318901062011719 7 Unmodified _WWWWIWWQWW_ chr12:54282841-54283827|48|40.69|0.0|21.96|+|1|HNRNPA1,HNRNPA1|1 0.0 0.726636491536033 6 [NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AD{I|L}[NP]{[QN]|[E{I|L}]|[KN]} 15 14 + 31.36 0.0 0.0 1.7943 1.7943 74.892 0.0 0.0 0.0 4.122758320274649 13.925449767853308 4.122758320274649 6.690067809585756 0 0.0 0.0 0.0 0.4247425010840047 [NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AD{I|L}[NP]{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W{I|L}[NP]{[QN]|[E{I|L}]|[KN]};[NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}AD{I|L}{[HG]|PP}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};[NP]{I|L}DM{I|L}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}W{I|L}{[HG]|PP}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 1.7943;1.4115;1.379;0.99627 -;-;-;- 247 1 1.514 30455.4 1.0 2568 5445 8008 SUDHL4_400M_050219_2,8015 SUDHL4_400M_050219_2,8015,WWWWIWWQWW False True False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 8016 42.946 271.0 134920.0 25 0 12471.0 + -1 KLSEYEMSI 9 71 558.2690050004222 1114.5234570676444 2 558.2688476443291 MULTI CID FTMS 0 0 0 8008 160601.421875 1.0 0 0.0 8 Oxidation (M) _KLSEYEM(Oxidation (M))SI_ ENSG00000138138|ENST00000680024|ATAD1;nc|ENSG00000138138|Q8NBU5-2|ATAD1 34.93206674587334 0.1032771302489716 6 [YT]TQQK{M(Oxidation (M))|F}S{I|L} 9 -1 + 46.934 0.0 0.0 4.2111 4.2111 83.883 0.0 0.0 0.0 25.50698126909261 10.959471728614574 10.959471728614574 10.56810945375765 0 0.805462187404089 0.0 1.3807196863200843 0.0 [YT]TQQK{M(Oxidation (M))|F}S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}QQK{M(Oxidation (M))|F}S{I|L};{[MS]|[{M(Oxidation (M))|F}A]}EKHH{M(Oxidation (M))|F}S{I|L};[K{I|L}]{[ES]|[DT]|[{I|L}C]}YE{M(Oxidation (M))|F}S{I|L};[K{I|L}]{[ES]|[DT]|[{I|L}C]}YET[{M(Oxidation (M))|F}V] 4.2111;3.2629;2.6523;2.4126;1.4284 -;-;-;+;- + 109 + 1 1.514 35698.1 1.0 2569 5445 8008 SUDHL4_400M_050219_2,8016 SUDHL4_400M_050219_2,8016,KLSEYEMSI False False KLSEYEMSI 42.94596 558.268847644329 758867.625 8008.0 ENSG00000138138|ENST00000680024|ATAD1;;nc|ENSG00000138138|Q8NBU5-2|ATAD1 4.459164222081502 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8017 42.958 668.0 147430.0 25 0 8988.2 -1 0 96 916.4224456648212 1830.830338396442 2 916.9246093630792 MULTI CID FTMS 0 0 0 8008 143126.578125 0.7807071492383673 -1 0.1072044372558593 9 6 [NP]{I|L}NE[HV]QAEN{I|L}NP 14 -1 68.898 0.0 0.0 3.7632 0.0 0.0 0.0 258.0557889953945 258.0557889953945 52.70049184562709 0.0 0.0 0.0 0 1.0 1.0 0.0 1.079689690656103 [NP]{I|L}NE[HV]QAEN{I|L}NP 3.7632 - 1052 1 1.514 66574.5 1.0 2570 5445 8008 SUDHL4_400M_050219_2,8017 SUDHL4_400M_050219_2,8017, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8018 42.971 800.0 195640.0 25 0 15098.0 + 10492 FTSPSPFSSTV 11 149 578.7775414773805 1155.540530021561 2 578.7777587771416 MULTI CID FTMS 0 0 0 8008 140577.203125 0.3889964181137497 -2 0.1257820129394531 10 Unmodified _FTSPSPFSSTV_ REV__ENSG00000166507|ENST00000309979|NDST2 39.94969957227396 0.2131707853268865 6 [R{I|L}]{I|L}DCCS{M(Oxidation (M))|F}TV 10 -1 + 54.725 0.0 0.0 4.7358 4.7358 82.167 0.0 0.0 0.0 8.88634070580975 14.146518864155126 8.88634070580975 8.45098040014257 0 0.9247425010840048 0.8538719643217619 0.5 0.2887254899964357 [R{I|L}]{I|L}DCCS{M(Oxidation (M))|F}TV;[R{I|L}]{I|L}DCC{M(Oxidation (M))|F}STV;[R{I|L}]{I|L}DCCST{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]CCS{M(Oxidation (M))|F}TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[ET]|[MV]}{[QG]|[NA]}{M(Oxidation (M))|F}EV;[R{I|L}]{I|L}DCA{[YC]|[HE]}TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}AC(Carbamidomethyl (C))A[C(Carbamidomethyl (C))K]TV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[QT]{[DA]|[EG]}{M(Oxidation (M))|F}EV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}A{[SA]|[TG]}{[DA]|[EG]}{M(Oxidation (M))|F}EV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]CC{M(Oxidation (M))|F}STV 4.7358;4.0045;3.9699;3.9668;3.8193;3.7181;3.5455;3.5009;3.2487;3.2355 -;-;-;-;-;-;-;-;-;- 3538 1 1.514 121987.8 0.5799999833106995 2571 5445 8008 SUDHL4_400M_050219_2,8018 SUDHL4_400M_050219_2,8018,FTSPSPFSSTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8020 42.976 55.0 787090.0 25 0 163260.0 40212 VGRIPYDII 9 71 523.3035751559308 1044.5925973786616 2 523.3038818240166 MULTI CID FTMS 0 0 0 8019 1025169.8125 0.8734958789006979 -6 0.31591796875 1 Unmodified _VGRIPYDII_ ENST00000372572.5_2_1:42730832-42744035:-|nuORF 2.059750862983233 0.8427793054688888 6 H 1 9 6.9897 0.0 0.0 0.66913 0.0 0.0 385.2811482593241 519.2416933824884 904.5228416418124 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.66913 - 2 + 1 1.514 39702.3 1.0 2572 5446 8019 SUDHL4_400M_050219_2,8020 SUDHL4_400M_050219_2,8020,VGRIPYDII False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8021 42.979 165.0 270860.0 25 0 58855.0 + 37423 TLDAGNIKL 9 70 472.773840540357 943.5331281475142 2 472.7743713259697 MULTI CID FTMS 0 0 0 8019 280196.96875 0.8492800496782676 1 -0.0611190795898437 2 Unmodified _TLDAGNIKL_ ENSG00000196504|ENST00000545856|PRPF40A;nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A 29.081581746732265 0.1611639662936252 6 [{I|L}T]DA[NG]{I|L}K{I|L} 9 0 + 48.338 0.0 0.0 5.1231 5.1231 90.099 0.0 0.0 0.0 34.52561882712928 5.150312510170778 5.150312510170778 48.3379001364149 0 0.8494850021680094 2.0 0.0 0.0 + + [{I|L}T]DA[NG]{I|L}K{I|L} 5.1231 + + 62 + 1 1.514 40449.9 1.0 2573 5446 8019 SUDHL4_400M_050219_2,8021 SUDHL4_400M_050219_2,8021,TLDAGNIKL False True TLDAGNIKL 42.979464 472.77437132597 1775414.0 8019.0 nc|ENSG00000196504|O75400-3|PRPF40A;;ENSG00000196504|ENST00000545856|PRPF40A;;nc|ENSG00000196504|O75400|PRPF40A;;nc|ENSG00000196504|O75400-2|PRPF40A 5.424942970275879 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8022 42.981 88.0 486490.0 25 0 35005.0 + 26192 NQFPGFKEV 9 75 533.271836850181 1064.529120767162 2 533.2717773318291 MULTI CID FTMS 0 0 0 8019 366959.6875 0.1127174147340763 -12 0.5784187316894531 3 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 26.268140514670165 0.1969607489560049 6 [NG]A{M(Oxidation (M))|F}V{M(Oxidation (M))|F}PG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 10 6 + 44.575 0.0 0.0 4.1873 4.1873 85.461 0.0 0.0 0.0 33.97909315201909 2.5317733972913814 2.5317733972913814 18.73835032203423 0 0.9247425010840048 0.0 0.8494850021680094 0.0 [NG]A{M(Oxidation (M))|F}V{M(Oxidation (M))|F}PG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};[NG]A{M(Oxidation (M))|F}P[{M(Oxidation (M))|F}V]G{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P[R{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.1873;2.4271;2.1013 -;-;- 218 + 1 1.514 42097.6 1.0 2574 5446 8019 SUDHL4_400M_050219_2,8022 SUDHL4_400M_050219_2,8022,NQFPGFKEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8023 42.993 693.0 190500.0 25 0 17860.0 + + 23764 LVLAPTREL 9 123 506.3137074407593 1010.6128619483186 2 506.3138610720634 MULTI CID FTMS 0 0 0 8019 154669.53125 0.8285164986005651 -2 0.1588020324707031 4 Unmodified _LVALIWPSI_ ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENSG00000165732|ENST00000354185|DDX21;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;nc|ENSG00000067048|O15523-2|DDX3Y;ENST00000578754.5_2_17:7476163-7480421:+|nuORF;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;nc|ENSG00000165732|Q9NR30-2|DDX21;ENST00000485101.5_1_3:186502728-186502902:+|nuORF;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000067048|O15523-3|DDX3Y;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;ENSG00000107625|ENST00000373585|DDX50;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENSG00000161960|ENST00000293831|EIF4A1;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;nc|ENSG00000156976|Q14240-2|EIF4A2;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;nc|ENSG00000215301|O00571-2|DDX3X;nc|ENSG00000161960|P60842-2|EIF4A1;ENSG00000156976|ENST00000323963|EIF4A2;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;ENSG00000108654|ENST00000225792|DDX5;ENST00000428062.1_1_13:37513331-37513424:-|nuORF;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;nc|ENSG00000100201|Q92841-2|DDX17;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;ENSG00000100201|ENST00000403230|DDX17;nc|ENSG00000100201|Q92841-3|DDX17;ENST00000483593.5_1_10:70666544-70673107:+|nuORF;ENST00000463199.1_1_Y:15025644-15026909:+|nuORF;nc|ENSG00000108654|P17844-2|DDX5 60.38955033654506 0.025866396858536 6 {I|L}V{I|L}A{I|L}AEES 9 -1 84.339 0.0 0.0 8.3453 0.0 0.0 0.0 82.06686578922108 82.06686578922108 65.92268479296628 0.0 0.0 0.0 0 1.424742501084005 2.0 0.6549471895720985 0.0 {I|L}V{I|L}A{I|L}AEES 8.3453 - 481 + 1 1.514 103518.0 1.0 2575 5446 8019 SUDHL4_400M_050219_2,8023 SUDHL4_400M_050219_2,8023,LVALIWPSI False False LVLAPTREL 42.993456 506.313861072063 1124224.0 8019.0 ENST00000465032.5_1_3:186501384-186502902:+|nuORF;;ENSG00000165732|ENST00000354185|DDX21;;ENST00000581621.1_1_17:7476159-7481249:+|nuORF;;nc|ENSG00000067048|O15523-2|DDX3Y;;ENST00000578754.5_2_17:7476163-7480421:+|nuORF;;ENST00000580461.5_1_17:7476163-7478717:+|nuORF;;nc|ENSG00000165732|Q9NR30-2|DDX21;;ENST00000485101.5_1_3:186502728-186502902:+|nuORF;;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;;nc|ENSG00000067048|O15523-3|DDX3Y;;ENST00000577731.1_1_17:7478540-7480862:+|nuORF;;ENSG00000107625|ENST00000373585|DDX50;;ENST00000581230.5_1_17:62498125-62502378:-|nuORF;;ENSG00000161960|ENST00000293831|EIF4A1;;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;;ENST00000584712.5_1_17:7476159-7478717:+|nuORF;;ENST00000578324.5_1_17:7477602-7481249:+|nuORF;;nc|ENSG00000156976|Q14240-2|EIF4A2;;ENST00000582848.5_1_17:7476159-7480015:+|nuORF;;nc|ENSG00000215301|O00571-2|DDX3X;;nc|ENSG00000161960|P60842-2|EIF4A1;;ENSG00000156976|ENST00000323963|EIF4A2;;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;;nc|ENSG00000100201|Q92841-1|DDX17;;ENST00000584901.5_1_17:7476159-7480015:+|nuORF;;ENSG00000108654|ENST00000225792|DDX5;;ENST00000428062.1_1_13:37513331-37513424:-|nuORF;;ENSG00000067048|ENST00000336079|DDX3Y;;ENSG00000215301|ENST00000644876|DDX3X;;nc|ENSG00000100201|Q92841-2|DDX17;;ENST00000465267.5_1_3:186501384-186502902:+|nuORF;;ENSG00000100201|ENST00000403230|DDX17;;nc|ENSG00000100201|Q92841-3|DDX17;;ENST00000483593.5_1_10:70666544-70673107:+|nuORF;;ENST00000463199.1_1_Y:15025644-15026909:+|nuORF;;nc|ENSG00000108654|P17844-2|DDX5 2.569045225779216 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8024 43.002 500.0 163840.0 25 0 23246.0 + 31238 RLSVPLDPPL 10 106 553.830297646023 1105.646042358846 2 553.8303100466728 MULTI CID FTMS 0 0 0 8019 145850.703125 0.6512492240010527 2 -0.0936050415039062 5 Unmodified _RLSVPLDPPL_ REV__ENST00000554736.5_1_14:52328042-52344361:+|nuORF 7.289230182591677 0.6929195370588109 6 {I|L} 1 -1 12.764 0.0 0.0 1.1545 0.0 0.0 974.5510849387272 0.0 974.5510849387272 0.0 1.7951097132083405 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1545 + + 56 + 1 1.514 70913.6 1.0 2576 5446 8019 SUDHL4_400M_050219_2,8024 SUDHL4_400M_050219_2,8024,RLSVPLDPPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8025 43.01 428.0 246780.0 25 0 16729.0 + 18187 KVADPVVTF 9 127 488.2792955894785 974.5440382457572 2 488.2792846560478 MULTI CID FTMS 0 0 0 8019 137712.375 0.5108105119399805 -2 0.1588020324707031 6 Unmodified _KVADPVVTF_ ENSG00000108883|ENST00000426333|EFTUD2;ENST00000586276.5_1_17:42931463-42937758:-|nuORF;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;ENST00000590977.5_1_17:42931463-42936567:-|nuORF;nc|ENSG00000108883|Q15029-2|EFTUD2;nc|ENSG00000108883|Q15029-3|EFTUD2 29.84058131909904 0.1515068451768857 6 {[TV]|[{I|L}S]}{[NV]|[RG]}PVVT{M(Oxidation (M))|F} 9 3 + 55.467 0.0 0.0 5.6916 5.6916 79.806 0.0 0.0 0.0 6.900603912694479 14.973024840566469 6.900603912694479 2.04119982655925 0 0.5 1.154901959985743 1.0044321917401078 0.0 {[TV]|[{I|L}S]}{[NV]|[RG]}PVVT{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{[NV]|[RG]}VPVT{M(Oxidation (M))|F};[TA][Q{I|L}]PVVT{M(Oxidation (M))|F};[VP]DAVKVT{M(Oxidation (M))|F};[TA][Q{I|L}]VPVT{M(Oxidation (M))|F};[VP]DAKVVT{M(Oxidation (M))|F};[VP]VDAKVT{M(Oxidation (M))|F};[VP]DVAKVT{M(Oxidation (M))|F};[PS][KT]PVVT{M(Oxidation (M))|F};[PS][KT]VPVT{M(Oxidation (M))|F} 5.6916;5.4822;4.9835;4.9303;4.7741;4.7026;4.6214;4.4932;4.2375;4.0281 -;-;-;-;-;-;-;-;-;- 558 1 1.514 85678.1 1.0 2577 5446 8019 SUDHL4_400M_050219_2,8025 SUDHL4_400M_050219_2,8025,KVADPVVTF False True KVADPVVTF 43.009919 488.279284656048 1479795.75 8019.0 ENST00000590977.5_1_17:42931463-42936567:-|nuORF;;ENST00000586276.5_1_17:42931463-42937758:-|nuORF;;nc|ENSG00000108883|Q15029-3|EFTUD2;;ENST00000590367.5_1_17:42931463-42950195:-|nuORF;;nc|ENSG00000108883|Q15029-2|EFTUD2;;ENSG00000108883|ENST00000426333|EFTUD2 4.932325998942058 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8026 43.024 800.0 190200.0 25 0 16408.0 + 16731 KEYVGIVRL 9 126 538.8264879531827 1075.6384229731652 2 538.8265258669853 MULTI CID FTMS 0 0 0 8019 124342.578125 0.6712151664680752 -1 0.0515975952148437 7 Unmodified _KEYVGIVRL_ ENSG00000130826|ENST00000369550|DKC1;nc|ENSG00000130826|O60832-2|DKC1 100.0907132914201 0.0108732765679663 6 KEYV{I|L}GVR{I|L} 9 2 + 84.223 0.0 0.0 7.8301 7.8301 85.497 0.0 0.0 0.0 53.778128284054105 17.4785615825148 17.4785615825148 2.218487496163561 0 2.4291746928241125 0.0 0.3252574989159953 0.5866968715561641 KEYV{I|L}GVR{I|L};KEYVG{I|L}VR{I|L};{I|L}SGYV{I|L}GVR{I|L};{I|L}SGYVG{I|L}VR{I|L};KEYV{I|L}G[R{I|L}]V;KEYVG{I|L}[R{I|L}]V;KE{I|L}[YV]GVR{I|L};K{I|L}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}GVR{I|L};{I|L}SGYV{I|L}G[R{I|L}]V;K{I|L}{[YD]|[{M(Oxidation (M))|F}M]}G{I|L}VR{I|L} 7.8301;7.6238;7.3546;7.1484;5.6629;5.4567;5.2681;5.2272;5.1875;5.0209 -;+;-;-;-;-;-;-;-;- + 458 + 1 1.514 120871.1 0.550000011920929 2578 5446 8019 SUDHL4_400M_050219_2,8026 SUDHL4_400M_050219_2,8026,KEYVGIVRL True True KEYVGIVRL 43.02375 538.826525866985 1064185.375 8019.0 nc|ENSG00000130826|O60832-2|DKC1;;ENSG00000130826|ENST00000369550|DKC1 6.469348112742106 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8027 43.033 497.0 168440.0 25 0 35614.0 -1 0 92 479.2778167442048 478.2705402776048 1 479.2777282595634 MULTI CID FTMS 0 0 0 8019 196596.828125 0.1416392563386796 6 -0.1779899597167968 8 6 {I|L} 1 -1 10.596 0.0 0.0 2.2155 0.0 0.0 347.1756896690095 0.0 347.1756896690095 0.0 7.101082016915949 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.2155 - 14 + 1 1.514 70211.3 1.0 2579 5446 8019 SUDHL4_400M_050219_2,8027 SUDHL4_400M_050219_2,8027, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8029 43.04 178.0 390260.0 25 0 42715.0 + 11359 GFVTIHKKS 9 88 508.7972724064079 1015.5799918796158 2 508.7990295290947 MULTI CID FTMS 0 0 0 8028 189842.65625 0.7552855685915764 -2 0.1127166748046875 1 Unmodified _GFVTIHKKS_ REV__ENSG00000188316|ENST00000341276|ENO4;REV__nc|ENSG00000188316|A6NNW6-2|ENO4;REV__nc|ENSG00000188316|A6NNW6-4|ENO4 4.75600775471527 0.7486543447549536 6 W 1 -1 12.474 0.0 0.0 1.2283 0.0 0.0 811.4899935659424 0.0 811.4899935659424 0.0 1.215190243431472 0.0 0.0 0 0.0 0.0 0.0 0.0 W 1.2283 - 24 + 1 1.514 56234.9 1.0 2580 5447 8028 SUDHL4_400M_050219_2,8029 SUDHL4_400M_050219_2,8029,GFVTIHKKS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8030 43.047 384.0 222000.0 25 0 10274.0 + 31291 RLYHELVGL 9 95 550.3166420354812 1098.6187311377623 2 550.3170043826103 MULTI CID FTMS 0 0 0 8028 32465.72265625 0.3714207202015225 1 -0.0324859619140625 2 Unmodified _RLYHELVGL_ ENSG00000180448|ENST00000313093|ARHGAP45;ENST00000587602.5_1_19:1073185-1086002:+|nuORF;nc|ENSG00000180448|Q92619-2|ARHGAP45 10.073929032068715 0.563993802247229 6 Y 1 8 13.495 0.0 0.0 1.2283 0.0 0.0 917.5445714471358 0.0 917.5445714471358 0.0 0.3072623954359699 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 1.2283 + + 249 + 1 1.514 70096.6 1.0 2581 5447 8028 SUDHL4_400M_050219_2,8030 SUDHL4_400M_050219_2,8030,RLYHELVGL False True RLYHELVGL 43.046798 550.31700438261 484492.6875 8028.0 nc|ENSG00000180448|Q92619-2|ARHGAP45;;ENST00000587602.5_1_19:1073185-1086002:+|nuORF;;ENSG00000180448|ENST00000313093|ARHGAP45 3.4358001550038657 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8031 43.051 236.0 349780.0 25 0 15134.0 + 31315 RMFDGKFVV 9 95 549.7919717072085 1097.569390481217 2 549.7921020388603 MULTI CID FTMS 0 0 0 8028 169938.9375 0.5734147031227955 -2 0.1127166748046875 3 Unmodified _RMFDGKFVV_ ENSG00000152332|ENST00000489294|UHMK1;nc|ENSG00000152332|Q8TAS1-3|UHMK1 34.93206674587334 0.1032771302489716 6 [{M(Oxidation (M))|F}V]{[MG]|[TS]}DGK{M(Oxidation (M))|F}VV 10 3 + 53.14 0.0 0.0 4.8416 4.8416 78.108 0.0 0.0 0.0 3.0102999566398125 15.026975159433526 3.0102999566398125 3.0102999566398125 0 0.75 1.0 0.8807196863200843 0.0 [{M(Oxidation (M))|F}V]{[MG]|[TS]}DGK{M(Oxidation (M))|F}VV;{[WT]|[RM]}{M(Oxidation (M))|F}DGK{M(Oxidation (M))|F}VV;[{M(Oxidation (M))|F}V]{[MG]|[TS]}DGKV{M(Oxidation (M))|F}V;{[WT]|[RM]}{M(Oxidation (M))|F}DGKV{M(Oxidation (M))|F}V;{[{M(Oxidation (M))|F}H]|[RQ]}[HQ]GK{M(Oxidation (M))|F}VV;{[{M(Oxidation (M))|F}H]|[RQ]}[HQ]GKV{M(Oxidation (M))|F}V;[WK][HA]PD{M(Oxidation (M))|F}VV;[{M(Oxidation (M))|F}V]{[MG]|[TS]}D[RK]{M(Oxidation (M))|F}V;{[WT]|[RM]}{M(Oxidation (M))|F}D[RK]{M(Oxidation (M))|F}V;[WK][HA]PDV{M(Oxidation (M))|F}V 4.8416;4.5673;3.5644;3.2901;2.9676;2.1459;2.0188;1.4625;1.1931;0.74152 -;+;-;-;-;-;-;-;-;- + 447 1 1.514 70582.6 1.0 2582 5447 8028 SUDHL4_400M_050219_2,8031 SUDHL4_400M_050219_2,8031,RMFDGKFVV True True RMFDGKFVV 43.05122 549.79210203886 1364256.625 8028.0 nc|ENSG00000152332|Q8TAS1-3|UHMK1;;ENSG00000152332|ENST00000489294|UHMK1 4.35527491569519 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8032 43.065 800.0 235490.0 25 0 29274.0 + 14885 ILLDNDHYAM 10 130 610.7839305846886 1219.5533082361771 2 610.7845336794853 MULTI CID FTMS 0 0 0 8028 150712.78125 0.1929919807715871 -8 0.3868064880371094 4 Oxidation (M) _ILLDNDHYAM(Oxidation (M))_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 79.59630418116434 0.0173986606250113 6 {I|L}{I|L}{I|L}DNDHYA{M(Oxidation (M))|F} 10 0 + 102.41 0.0 0.0 8.3971 8.3971 96.061 0.0 0.0 0.0 66.45848644456385 14.51544993495972 14.51544993495972 15.858991248664452 0 1.079689690656103 2.0 0.7059771852360797 0.6694451763165201 + + {I|L}{I|L}{I|L}DNDHYA{M(Oxidation (M))|F};{I|L}{I|L}{I|L}DGGDHYA{M(Oxidation (M))|F};{I|L}{I|L}{I|L}D{[{M(Oxidation (M))|F}H]|[RQ]}D[NS]{M(Oxidation (M))|F};{I|L}{I|L}[WY]YD[NS]{M(Oxidation (M))|F};{I|L}{I|L}[WY]DY[NS]{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}A{I|L}YD[NS]{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}A{I|L}Y[MN]A{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}AY{I|L}D[NS]{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}AY{I|L}[MN]A{M(Oxidation (M))|F};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}A{I|L}[MN]YA{M(Oxidation (M))|F} 8.3971;7.0967;6.4516;5.4825;4.7384;3.5016;3.4489;3.4316;3.3789;3.2021 +;-;-;-;-;-;-;-;-;- + 2559 + 1 1.514 138391.5 0.6100000143051147 2583 5447 8028 SUDHL4_400M_050219_2,8032 SUDHL4_400M_050219_2,8032,ILLDNDHYAM True False ILLDNDHYAM 43.065058 610.784533679485 8018481.5 8028.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 7.536032835642497 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8034 43.073 270.0 222170.0 25 0 9895.7 + -1 RMFDGKFVV 9 89 557.7892531781938 1113.5639534231875 2 557.7895995974541 MULTI CID FTMS 0 0 0 8033 166233.65625 0.7801211741156743 -1 0.0324859619140625 1 Oxidation (M) _RM(Oxidation (M))FDGKFVV_ nc|ENSG00000152332|Q8TAS1-3|UHMK1;ENSG00000152332|ENST00000489294|UHMK1 20.41453444215458 0.284085796332423 6 [{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}VV 9 -1 + 37.728 0.0 0.0 3.3881 3.3881 84.437 0.0 0.0 0.0 3.1902215366609 12.797237144747584 3.1902215366609 37.728434701000985 0 0.5610312860818771 1.3979400086720375 0.8807196863200843 0.0 [{M(Oxidation (M))|F}V][{M(Oxidation (M))|F}E]{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}VV 3.3881 - 142 1 1.514 49988.5 1.0 2584 5448 8033 SUDHL4_400M_050219_2,8034 SUDHL4_400M_050219_2,8034,RMFDGKFVV False False RMFDGKFVV 43.072593 557.789599597454 1249428.375 8033.0 nc|ENSG00000152332|Q8TAS1-3|UHMK1;;ENSG00000152332|ENST00000489294|UHMK1 4.092083851496379 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8035 43.086 800.0 109400.0 25 0 3557.9 -1 0 97 908.42350533873 1814.83245774426 2 908.4264404177666 MULTI CID FTMS 0 0 0 8033 52714.67578125 0.4521118094326067 1 -0.0321006774902343 2 6 [MN]PN{I|L}NEAQVHEN{I|L} 14 -1 93.89 0.0 0.0 5.1735 0.0 0.0 0.0 208.0728701227172 208.0728701227172 74.15414204074793 0.0 0.0 0.0 0 0.6549471895720984 1.5228787452803376 0.3252574989159953 1.1549471895720984 [MN]PN{I|L}NEAQVHEN{I|L} 5.1735 - 2852 + 1 1.514 64869.9 0.5199999809265137 2585 5448 8033 SUDHL4_400M_050219_2,8035 SUDHL4_400M_050219_2,8035, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8036 43.088 82.0 668490.0 25 0 83061.0 + 32013 RVIDVGSEW 9 69 530.7752073269024 1059.5358617206048 2 530.7752563357353 MULTI CID FTMS 0 0 0 8033 514228.65625 0.8072595246939636 -5 0.2709846496582031 3 Unmodified _RVIDVGSEW_ ENSG00000137947|ENST00000370500|GTF2B;ENST00000494819.5_1_1:89324456-89357188:-|nuORF 24.99096001346401 0.2132109383330889 6 DVGSEW 6 3 56.459 0.0 0.0 5.3286 0.0 0.0 368.25422866035314 0.0 368.25422866035314 0.0 47.50630971391878 0.0 0.0 0 0.4247425010840047 0.0 0.805462187404089 0.0 + DVGSEW 5.3286 + + 54 1 1.514 47301.7 1.0 2586 5448 8033 SUDHL4_400M_050219_2,8036 SUDHL4_400M_050219_2,8036,RVIDVGSEW False True RVIDVGSEW 43.088312 530.775256335735 3418613.5 8033.0 ENSG00000137947|ENST00000370500|GTF2B;;ENST00000494819.5_1_1:89324456-89357188:-|nuORF 7.207637945810954 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8037 43.093 252.0 284060.0 25 0 49878.0 + 14888 ILLDNDHYAM 10 72 602.7866776041866 1203.558802275173 2 602.7872192263603 MULTI CID FTMS 0 0 0 8033 217142.546875 0.424146430032268 -5 0.2709846496582031 4 Unmodified _ILLDNDHYAM_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 32.78568957990786 0.2337485590374503 6 {I|L}{I|L}{I|L}D 4 6 54.597 0.0 0.0 4.5363 0.0 0.0 0.0 746.2583712213499 746.2583712213499 26.180540824916392 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + {I|L}{I|L}{I|L}D 4.5363 + + 216 + 1 1.514 54968.5 1.0 2587 5448 8033 SUDHL4_400M_050219_2,8037 SUDHL4_400M_050219_2,8037,ILLDNDHYAM False True ILLDNDHYAM 43.093001 602.78721922636 2230272.5 8033.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 5.1882790724436445 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8038 43.097 218.0 299240.0 25 0 14352.0 + 29391 QLAQFVHEV 9 109 535.7858198984745 1069.557086863749 2 535.7867919802666 MULTI CID FTMS 0 0 0 8033 97839.640625 0.1528208019568132 -7 0.3539810180664062 5 Unmodified _QLAQFVHEV_ ENSG00000013573|ENST00000542838|DDX11;ENST00000535158.5_1_12:31227017-31242187:+|nuORF;ENST00000536265.5_1_12:31227017-31242486:+|nuORF;ENST00000539757.1_1_12:9440801-9462940:+|nuORF;ENST00000542242.1_1_12:31240692-31242486:+|nuORF;ENST00000542244.5_1_12:31237807-31242486:+|nuORF;ENST00000543026.5_1_12:31240692-31242187:+|nuORF;nc|ENSG00000013573|Q96FC9-3|DDX11;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000013573|Q96FC9|DDX11;nc|ENSG00000214826|Q92771|DDX12P;nc|ENSG00000256263|A8MPP1|DDX11L8 41.8396318013385 0.0653578398400075 6 [Q{I|L}]AQ{M(Oxidation (M))|F}VVHE 9 2 + 50.918 0.0 0.0 4.7606 4.7606 85.317 0.0 0.0 0.0 14.110174973905927 10.09571831392519 10.09571831392519 10.09571831392519 0 0.6237125054200234 1.6989700043360187 0.6861818737241735 0.5 [Q{I|L}]AQ{M(Oxidation (M))|F}VVHE;[Q{I|L}]AQ{M(Oxidation (M))|F}V[HD]{I|L};[Q{I|L}]AQEVH[{M(Oxidation (M))|F}V];[Q{I|L}]A[AG]{M(Oxidation (M))|F}VVHE;[Q{I|L}]A[AG]{M(Oxidation (M))|F}V[HD]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[WR]VH[{M(Oxidation (M))|F}V];[QA]{I|L}QEVH[{M(Oxidation (M))|F}V];[EP][{I|L}T]{M(Oxidation (M))|F}VVHE;[QA][PS]V{M(Oxidation (M))|F}[{I|L}T][HA];[EP][{I|L}T]{M(Oxidation (M))|F}V[HD]{I|L} 4.7606;3.8167;3.4414;3.4322;2.4883;2.4182;1.5454;1.3774;0.45676;0.43348 -;-;-;-;-;-;-;-;-;- 429 + 1 1.514 55896.3 1.0 2588 5448 8033 SUDHL4_400M_050219_2,8038 SUDHL4_400M_050219_2,8038,QLAQFVHEV True True QLAQFVHEV 43.097139 535.786791980267 6466101.0 8033.0 ENST00000535158.5_1_12:31227017-31242187:+|nuORF;;ENST00000536265.5_1_12:31227017-31242486:+|nuORF;;nc|ENSG00000013573|Q96FC9|DDX11;;nc|ENSG00000013573|Q96FC9-4|DDX11;;nc|ENSG00000214826|Q92771|DDX12P;;ENST00000542244.5_1_12:31237807-31242486:+|nuORF;;ENST00000539757.1_1_12:9440801-9462940:+|nuORF;;ENSG00000013573|ENST00000542838|DDX11;;nc|ENSG00000256263|A8MPP1|DDX11L8;;ENST00000542242.1_1_12:31240692-31242486:+|nuORF;;nc|ENSG00000013573|Q96FC9-3|DDX11;;ENST00000543026.5_1_12:31240692-31242187:+|nuORF 6.281073570251465 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8040 43.102 39.0 1055300.0 25 0 128510.0 + 31011 RLFDEPQLA 9 51 544.791167328316 1087.5677817234318 2 544.7908813357353 MULTI CID FTMS 0 0 0 8039 1064717.5 0.998168835134928 3 -0.0522842407226562 1 Unmodified _RLFDEPQLA_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1 12.240655878213236 0.5053430591993562 6 TEPQ[{I|L}A] 6 4 36.911 0.0 0.0 3.3939 0.0 0.0 430.2273731916032 0.0 430.2273731916032 0.0 31.42667503568731 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 TEPQ[{I|L}A] 3.3939 - 85 1 1.514 38236.0 1.0 2589 5449 8039 SUDHL4_400M_050219_2,8040 SUDHL4_400M_050219_2,8040,RLFDEPQLA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8041 43.113 596.0 168400.0 25 0 15228.0 + 1507 ALHRETTK 8 118 478.2694832212155 954.5244135092312 2 478.2690307497978 MULTI CID FTMS 0 0 0 8039 97260.25 0.2489918771760992 -15 0.7041244506835938 2 Unmodified _ALHRETTK_ REV__ENSG00000143951|ENST00000272321|WDPCP;REV__ENST00000409835.5_1_2:63587012-63815411:-|nuORF;REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF;REV__nc|ENSG00000143951|O95876-2|WDPCP;REV__nc|ENSG00000143951|O95876-3|WDPCP 13.50788311687929 0.7113601687236069 6 [{I|L}A]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HN]{I|L}{I|L} 8 -1 [{I|L}A]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HN]{I|L} + + 10.379 -0.29037 -0.035263 1.0873 1.0873 49.934 0.0 0.0 0.0 0.0 -7.58019660375016 -7.58019660375016 0.0 0 0.0 0.0 0.0 0.0 [{I|L}A]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[HN]{I|L}{I|L} 1.0873 - 56 + 1 1.514 81929.4 1.0 2590 5449 8039 SUDHL4_400M_050219_2,8041 SUDHL4_400M_050219_2,8041,ALHRETTK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8044 43.129 558.0 192220.0 25 0 26079.0 31661 RRGQVGPV 8 122 434.7598761673364 867.5051994014727 2 434.7591430544853 MULTI CID FTMS 0 0 0 8043 152804.1875 0.3679904910298755 5 -0.1294441223144531 1 Unmodified _RRGQVGPV_ ENST00000462875.1_1_6:31609004-31609235:-|nuORF 0.7936320650641473 0.8195151834710337 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.514 85603.6 1.0 2591 5451 8043 SUDHL4_400M_050219_2,8044 SUDHL4_400M_050219_2,8044,RRGQVGPV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8045 43.136 371.0 232430.0 25 0 43060.0 40176 VGPIRRGG 8 104 406.2485091000349 810.4824652668699 2 406.2483703494072 MULTI CID FTMS 0 0 0 8043 216679.703125 0.0520088226759065 -9 0.37091064453125 2 Unmodified _VGPIRRGG_ ENST00000285605.7_1_10:99474680-99474815:+|nuORF 0.7936320650641473 0.8195151834710337 6 {I|L} 1 7 8.8224 0.0 0.0 1.0885 0.0 0.0 679.3875688819074 0.0 679.3875688819074 0.0 4.842957678741882 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0885 + + 17 + 1 1.514 71616.2 1.0 2592 5451 8043 SUDHL4_400M_050219_2,8045 SUDHL4_400M_050219_2,8045,VGPIRRGG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8046 43.149 800.0 184190.0 25 0 37406.0 + 40946 VLTTVAPK 8 125 414.7619608986876 827.5093688641753 2 414.7615539431572 MULTI CID FTMS 0 0 0 8043 98591.921875 0.0550171419503458 -8 0.3225135803222656 3 Unmodified _VLTTVAPK_ REV__ENSG00000172534|ENST00000310441|HCFC1;REV__nc|ENSG00000172534|P51610-2|HCFC1;REV__nc|ENSG00000172534|P51610-4|HCFC1 2.302733041254933 0.8103549651115762 6 {I|L} 1 -1 2.7642 0.0 0.0 0.33404 0.0 0.0 413.4371470397596 297.96308313541255 711.4002301751722 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.33404 + + 12 + 1 1.514 117148.6 0.4000000059604645 2593 5451 8043 SUDHL4_400M_050219_2,8046 SUDHL4_400M_050219_2,8046,VLTTVAPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8049 43.162 356.0 219620.0 25 0 29622.0 + 18033 KSLPHGGR 8 99 426.2461837590248 850.4778145848496 2 426.2459899783134 MULTI CID FTMS 0 0 0 8048 189129.828125 0.2554186450344582 7 -0.1848373413085937 1 Unmodified _KSLPHGGR_ REV__ENSG00000173992|ENST00000533244|CCS;REV__ENST00000530961.5_1_11:66372641-66373323:+|nuORF 2.302733041254933 0.8103549651115762 6 {M(Oxidation (M))|F} 1 -1 12.764 0.0 0.0 1.5008 0.0 0.0 685.4313801139497 0.0 685.4313801139497 0.0 2.8872548999643577 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.5008 - 7 + 1 1.514 65928.7 1.0 2594 5453 8048 SUDHL4_400M_050219_2,8049 SUDHL4_400M_050219_2,8049,KSLPHGGR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8050 43.171 476.0 187870.0 25 0 25333.0 + 38759 SLAEKIQAL 9 115 486.78667339701786 0 486.7899963259697 PEAK CID FTMS 0 0 0 8048 161179.984375 0.9550455857403084 -2 0.0367469787597656 2 Unmodified _TVAYRLHL_ ENSG00000148331|ENST00000277458|ASB6 23.1484247019978 0.3584660196589264 6 AQAVAD 6 7 31.121 0.0 0.0 3.2032 0.0 0.0 331.205291518842 82.06687341861561 413.2721649374576 0.0 0.0 0.0 0.0 0 1.0 0.0 0.3252574989159953 0.4247425010840047 AQAVAD 3.2032 - 399 + 1 1.514 74199.2 1.0 2595 5453 8048 SUDHL4_400M_050219_2,8050 SUDHL4_400M_050219_2,8050,TVAYRLHL False False SLAEKIQAL 43.170697 486.78999632597 944835.75 8048.0 ENSG00000148331|ENST00000277458|ASB6 3.6236258347829184 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8051 43.185 800.0 115820.0 25 0 7998.0 + 24632 MLPPPPLTA 9 117 468.7639676812421 935.5133824292842 2 468.7649108767509 MULTI CID FTMS 0 0 0 8048 96795.515625 0.1165672785728758 -11 0.4076576232910156 3 Unmodified _MLPPPPLTA_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 114.943777797906 0.0034891922099073 6 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPPP{I|L}TA 9 0 + 72.947 0.0 0.0 7.7975 7.7975 96.398 0.0 0.0 0.0 41.04548165299995 12.252684618815088 12.252684618815088 22.945312593723983 0 1.9802046884880933 2.0 1.8564921830680703 0.0 + + {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPPP{I|L}TA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]P{I|L}TA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPPPV[VS];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}P[YK]{I|L}TA;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPPVP[VS];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPPP[TA]{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}PPPV[VS]P;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}[YK]P{I|L}[TA];[{I|L}P]PPPM{I|L}[TA];[{I|L}P]PPPTAM{I|L} 7.7975;5.3448;5.3044;5.3039;5.0475;5.0446;4.6378;3.7654;2.9907;2.9727 +;-;-;-;-;-;-;-;-;- + 529 + 1 1.514 72550.1 0.4399999976158142 2596 5453 8048 SUDHL4_400M_050219_2,8051 SUDHL4_400M_050219_2,8051,MLPPPPLTA True True MLPPPPLTA 43.184511 468.764910876751 7763089.5 8048.0 nc|ENSG00000105486|P18858-2|LIG1;;ENSG00000105486|ENST00000263274|LIG1;;nc|ENSG00000105486|P18858-3|LIG1 6.579864184061687 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8052 43.198 800.0 123740.0 25 0 7686.9 -1 0 92 901.9079316808492 1801.8013104284985 2 901.9105102419852 MULTI CID FTMS 0 0 0 8048 94088.859375 0.8591563764430532 -4 0.0561752319335937 4 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEE[TP]{[WN]|[YH]}{I|L}SQ 16 -1 + 70.766 0.0 0.0 3.9275 3.9275 71.706 0.0 0.0 0.0 48.62572235417012 6.660546934575464 6.660546934575464 0.5803717656404217 0 1.274227503252014 0.0 0.2059771852360797 1.798455006504028 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEE[TP]{[WN]|[YH]}{I|L}SQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEE[TP]{[WN]|[YH]}S{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEE[TP]{[WN]|[YH]}{I|L}SQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEE[TP]{[WN]|[YH]}S{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEE[TP][C(Carbamidomethyl (C))R]PSQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEEVV[C(Carbamidomethyl (C))R]PSQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEE[TP][C(Carbamidomethyl (C))R]PSQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEEVV[C(Carbamidomethyl (C))R]PSQ;{[QV]|[N{I|L}]|[RA]|[KV]}PN{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R][NS]N{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}[C(Carbamidomethyl (C))R][NS]N{I|L}GGP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.9275;3.8953;3.8893;3.8571;3.7611;3.7611;3.7229;3.7229;3.1761;3.1761 -;-;-;-;-;-;-;-;-;- 697 + 1 1.514 70828.6 0.4900000095367431 2597 5453 8048 SUDHL4_400M_050219_2,8052 SUDHL4_400M_050219_2,8052, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8054 43.204 86.0 583110.0 25 0 91695.0 + 13149 HFKSTIGPI 9 67 500.2829222482266 998.5512915632534 2 500.2828857302666 MULTI CID FTMS 0 0 0 8053 586028.625 0.7970437716825949 5 -0.1285400390625 1 Unmodified _HFKSTIGPI_ REV__ENSG00000180773|ENST00000326402|SLC36A4;REV__ENST00000526735.1_1_11:92887247-92899179:-|nuORF;REV__ENST00000527503.1_1_11:92881705-92887463:-|nuORF;REV__nc|ENSG00000180773|Q6YBV0-2|SLC36A4 3.944395688203298 0.7769873103969335 6 V 1 -1 1.1092 0.0 0.0 0.11109 0.0 0.0 400.2729845337596 496.1990755670532 896.4720601008128 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.11109 - 5 + 1 1.514 44941.4 1.0 2598 5454 8053 SUDHL4_400M_050219_2,8054 SUDHL4_400M_050219_2,8054,HFKSTIGPI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8055 43.207 117.0 225290.0 25 0 18392.0 45652 YVPRAVLVD 9 64 516.2962701045436 1030.5779872758872 2 516.2962524294853 MULTI CID FTMS 0 0 0 8053 425521.84375 0.8416227205701973 1 -0.01605224609375 2 Unmodified _YVPRAVLVD_ CON__ENSEMBL:ENSBTAP00000025008;ENSG00000101162|ENST00000217133|TUBB1;ENSG00000104833|ENST00000264071|TUBB4A;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000261456|ENST00000568584|TUBB8;ENST00000604929.1_1_9:140135770-140136775:+|nuORF 4.75600775471527 0.7486543447549536 6 [YV][RP]AA{I|L}{[QN]|[E{I|L}]|[KN]} 9 3 + 24.383 0.0 0.0 2.366 2.366 81.968 0.0 0.0 0.0 13.92544976785331 14.850133099271238 13.92544976785331 22.641179123312103 0 0.0 1.6989700043360187 0.0 0.0 [YV][RP]AA{I|L}{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RV][RP]M{I|L} 2.366;0.16902 -;- 20 1 1.514 27485.3 1.0 2599 5454 8053 SUDHL4_400M_050219_2,8055 SUDHL4_400M_050219_2,8055,YVPRAVLVD False False False False contaminant PXD020620_cell_line SUDHL4_400M_050219_2 8056 43.211 204.0 231970.0 25 0 46364.0 + 37886 TLVYHVVGV 9 64 493.7861167870489 985.5576806408978 2 493.7873718142509 MULTI CID FTMS 0 0 0 8053 233204.875 0.2218624880901245 7 -0.1639556884765625 3 Unmodified _TLVYHVVGV_ ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-2|SF3B3 23.1484247019978 0.2366544122328345 6 [{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}VG 6 4 28.161 0.0 0.0 2.8573 0.0 0.0 0.0 328.18705010794787 328.18705010794787 5.752574989159953 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T]{[{M(Oxidation (M))|F}H]|[RQ]}VG 2.8573 - 80 1 1.514 41301.9 1.0 2600 5454 8053 SUDHL4_400M_050219_2,8056 SUDHL4_400M_050219_2,8056,TLVYHVVGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8057 43.214 203.0 292030.0 25 0 31890.0 + 40458 VILPTVHEV 9 83 503.799930764226 1005.585308595252 2 503.7997619509697 MULTI CID FTMS 0 0 0 8053 221984.5625 0.3755510474077351 7 -0.1639556884765625 4 Unmodified _VILPTVHEV_ ENSG00000174839|ENST00000311128|DENND6A;ENST00000487662.1_1_3:57643405-57651906:-|nuORF 28.486842064014134 0.1687311288560894 6 [{I|L}V]{I|L}V 4 5 32.307 0.0 0.0 3.2128 0.0 0.0 0.0 578.2587984674436 578.2587984674436 12.05107642466702 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}V]{I|L}V 3.2128 - 182 + 1 1.514 51541.3 1.0 2601 5454 8053 SUDHL4_400M_050219_2,8057 SUDHL4_400M_050219_2,8057,VILPTVHEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8059 43.227 593.0 160530.0 25 0 15228.0 + 405 AEEDFYEKL 9 115 572.2640422895315 1142.513531645863 2 572.2641479372978 MULTI CID FTMS 0 0 0 8058 113812.6875 0.6563648906997466 -2 0.0610847473144531 1 Unmodified _AEEDFYEKL_ ENSG00000166508|ENST00000303887|MCM7;nc|ENSG00000166508|P33993-3|MCM7 41.95555342248728 0.0647214845423414 6 {[CP]|[EA]}ED{M(Oxidation (M))|F}YEK{I|L} 9 0 + 58.439 0.0 0.0 5.1149 5.1149 87.943 0.0 0.0 0.0 37.17925002484726 10.597718523607966 10.597718523607966 15.740312677277188 0 0.6989700043360187 0.0 0.805462187404089 0.2302046884880938 + + {[CP]|[EA]}ED{M(Oxidation (M))|F}YEK{I|L};{[CP]|[EA]}EY{[{M(Oxidation (M))|F}D]|MM}EK{I|L};{[CP]|[EA]}EYK[C(Carbamidomethyl (C))C]K{I|L};{[CP]|[EA]}EYK{[HG]|PP}[Y{M(Oxidation (M))|F}];{[MS]|[{M(Oxidation (M))|F}A]}HH{[{M(Oxidation (M))|F}D]|MM}EK{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}YE[K{I|L}]{[CP]|[EA]};{[{M(Oxidation (M))|F}D]|MM}EYE[K{I|L}]{[CP]|[EA]};[YE]{M(Oxidation (M))|F}DE[K{I|L}]{[CP]|[EA]};{[{M(Oxidation (M))|F}D]|MM}YEE[K{I|L}]{[CP]|[EA]};{[CP]|[EA]}E{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[QP][Y{M(Oxidation (M))|F}] 5.1149;3.7372;2.5287;1.1437;1.1125;1.0968;0.75515;0.68109;0.15413;0.11435 +;-;-;-;-;-;-;-;-;- + 234 + 1 1.514 72368.3 1.0 2602 5455 8058 SUDHL4_400M_050219_2,8059 SUDHL4_400M_050219_2,8059,AEEDFYEKL True True AEEDFYEKL 43.227342 572.264147937298 774131.8125 8058.0 nc|ENSG00000166508|P33993-3|MCM7;;ENSG00000166508|ENST00000303887|MCM7 7.592216968536377 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8060 43.235 437.0 132230.0 25 0 44422.0 40637 VLDKILPL 8 57 455.80116368055104 909.587774427902 2 455.8014404177666 MULTI CID FTMS 0 0 0 8058 141378.640625 0.6267680127954913 -4 0.0978317260742187 2 Unmodified _VLDKILPL_ ENSG00000152223|ENST00000282041|EPG5;ENST00000587974.1_1_18:43487913-43547205:-|nuORF;nc|ENSG00000152223|Q9HCE0-2|EPG5 2.302733041254933 0.8103549651115762 6 P 1 7 2.4743 0.0 0.0 0.27202 0.0 0.0 612.4301033847365 197.0830782526 809.5131816373365 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.27202 + + 1 + 1 1.514 49804.2 1.0 2603 5455 8058 SUDHL4_400M_050219_2,8060 SUDHL4_400M_050219_2,8060,VLDKILPL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8061 43.246 626.0 136880.0 25 0 14399.0 + -1 SLISNPPAM 9 109 473.238976288786 944.463399644372 2 473.2392150759697 MULTI CID FTMS 0 0 0 8058 120868.296875 0.8459879671879325 -3 0.0649757385253906 3 Oxidation (M) _SLISNPPAM(Oxidation (M))_ nc|ENSG00000123338|P55160-2|NCKAP1L;ENSG00000123338|ENST00000293373|NCKAP1L 24.67388899826682 0.2172451872415813 6 {[TV]|[{I|L}S]}{I|L}C(Carbamidomethyl (C)) 4 -1 29.091 0.0 0.0 3.0801 0.0 0.0 0.0 468.2140764844689 468.2140764844689 7.944477609833939 0.0 0.0 0.0 0 0.0 2.0 0.1923877696554315 0.0 {[TV]|[{I|L}S]}{I|L}C(Carbamidomethyl (C)) 3.0801 - 229 1 1.514 70892.7 1.0 2604 5455 8058 SUDHL4_400M_050219_2,8061 SUDHL4_400M_050219_2,8061,SLISNPPAM False False SLISNPPAM 43.246026 473.23921507597 848717.8125 8058.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 6.294170379638672 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8063 43.251 18.0 2917800.0 25 0 285180.0 + 26193 NQFPGFKEV 9 83 533.271836850181 1064.529120767162 2 533.2720214724541 MULTI CID FTMS 0 0 0 8062 2976009.75 0.9141280000774058 -2 0.0476646423339843 1 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 29.081581746732265 0.1611639662936252 6 {[ET]|[MV]}AK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 9 9 + 41.806 0.0 0.0 3.9272 3.9272 73.494 0.0 0.0 0.0 1.1270428019128786 30.8366748685809 1.1270428019128786 1.7609125905568137 0 1.0 0.0 0.8494850021680094 0.0 {[ET]|[MV]}AK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS];{[ET]|[MV]}A{M(Oxidation (M))|F}KV{M(Oxidation (M))|F}[HS];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}PG{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}E[TA]V{M(Oxidation (M))|F}[HS];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V[TA]{[WT]|[RM]}V 3.9272;3.7617;3.3616;2.3312;1.7656 -;-;-;-;- 230 1 1.514 45615.5 1.0 2605 5456 8062 SUDHL4_400M_050219_2,8063 SUDHL4_400M_050219_2,8063,NQFPGFKEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8064 43.252 48.0 849730.0 25 0 195250.0 43400 WQRVILCK 8 56 523.3035751559308 1044.5925973786616 2 523.3038818240166 MULTI CID FTMS 0 0 0 8062 1080719.375 0.9208268803863536 4 -0.0921401977539062 2 Unmodified _WQRVILCK_ ENST00000441433.1_1_7:26961755-26962307:+|nuORF 0.7936320650641473 0.8195151834710337 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.514 37889.1 1.0 2606 5456 8062 SUDHL4_400M_050219_2,8064 SUDHL4_400M_050219_2,8064,WQRVILCK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8066 43.265 613.0 138870.0 25 0 20508.0 20123 LKKLSSGI 8 106 423.2745617194926 844.5345705057853 2 423.2747680544853 MULTI CID FTMS 0 0 0 8065 135697.890625 0.6197556905186781 -2 0.0377006530761718 1 Unmodified _LKKLSSGI_ ENST00000540664.5_1_10:98722597-98722837:+|nuORF 5.230669730166228 0.792582437072536 6 {I|L} 1 7 11.99 0.0 0.0 1.4197 0.0 0.0 713.4396436032447 0.0 713.4396436032447 0.0 10.395906230238126 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.4197 + + 37 + 1 1.514 70501.8 1.0 2607 5457 8065 SUDHL4_400M_050219_2,8066 SUDHL4_400M_050219_2,8066,LKKLSSGI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8067 43.279 800.0 177650.0 25 0 17148.0 + 16966 KIPTPIVGV 9 137 462.2997806220879 922.5850083109758 2 462.2997314333916 MULTI CID FTMS 0 0 0 8065 107388.40625 0.7858678084263281 -4 0.098785400390625 2 Unmodified _KIPTPIVGV_ ENSG00000090060|ENST00000216277|PAPOLA 39.94969957227396 0.0757326808254658 6 G{I|L}PTP{I|L}VR 8 3 41.185 0.0 0.0 4.4641 0.0 0.0 71.07425124336093 0.0 71.07425124336093 0.0 25.70026539828784 0.0 0.0 0 1.274227503252014 0.0 0.6203715150305281 0.0 G{I|L}PTP{I|L}VR 4.4641 - 255 1 1.514 110656.5 0.4699999988079071 2608 5457 8065 SUDHL4_400M_050219_2,8067 SUDHL4_400M_050219_2,8067,KIPTPIVGV True True KIPTPIVGV 43.279177 462.299731433392 834346.375 8065.0 ENSG00000090060|ENST00000216277|PAPOLA 5.366897106170654 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8069 43.297 800.0 136880.0 25 0 21625.0 -1 0 108 893.9112162899319 1785.8078796466637 2 893.9114257693291 MULTI CID FTMS 0 0 0 8068 47962.5859375 0.5242800172231894 3 -0.0831298828125 1 6 [MN]PN{I|L}NEE{[{M(Oxidation (M))|F}H]|[RQ]}V{[DS]|[MA]|[CV]|TT}{I|L}Q 15 -1 + 89.686 0.0 0.0 5.0221 5.0221 86.003 0.0 0.0 0.0 66.9849078913372 16.88424994129406 16.88424994129406 9.604093769761874 0 0.91944517631652 1.5228787452803376 0.4247425010840047 1.622363747448347 [MN]PN{I|L}NEE{[{M(Oxidation (M))|F}H]|[RQ]}V{[DS]|[MA]|[CV]|TT}{I|L}Q;[MN]PN{I|L}NEE[NS]QQQ{I|L}Q;[MN]NP{I|L}NEE{[{M(Oxidation (M))|F}H]|[RQ]}V{[DS]|[MA]|[CV]|TT}{I|L}Q;[MN]PN{I|L}NEE{NN|[MP]|[D{I|L}]|[EV]}TQQ{I|L}Q;[MN]NP{I|L}NEE[NS]QQQ{I|L}Q;[MN]NP{I|L}NEE{NN|[MP]|[D{I|L}]|[EV]}TQQ{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}VN{I|L}NEE{[{M(Oxidation (M))|F}H]|[RQ]}V{[DS]|[MA]|[CV]|TT}{I|L}Q;{[{M(Oxidation (M))|F}D]|MM}PP{I|L}NEE{[{M(Oxidation (M))|F}H]|[RQ]}V{[DS]|[MA]|[CV]|TT}{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}VN{I|L}NEE[NS]QQQ{I|L}Q;{[QD]|[EN]|[WG]|[KD]|[RS]}VN{I|L}NEE{NN|[MP]|[D{I|L}]|[EV]}TQQ{I|L}Q 5.0221;4.4843;4.404;4.2871;3.8662;3.669;3.5027;2.9831;2.9649;2.7677 -;-;-;-;-;-;-;-;-;- 1263 + 1 1.514 78273.1 0.4900000095367431 2609 5458 8068 SUDHL4_400M_050219_2,8069 SUDHL4_400M_050219_2,8069, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8070 43.302 285.0 266290.0 25 0 32144.0 + 1584 ALLERGYSL 9 103 511.2875364544317 1020.5605199756636 2 511.2875244021416 MULTI CID FTMS 0 0 0 8068 152146.859375 0.1547330678714026 -6 0.1297492980957031 2 Unmodified _ALLERGYSL_ ENSG00000182199|ENST00000328923|SHMT2;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 53.40400417844725 0.0329064971918313 6 {I|L}A{I|L}[KC]HHS{I|L} 9 6 + 71.933 0.0 0.0 7.0484 7.0484 91.881 0.0 0.0 0.0 42.680694551991536 6.015603662034863 6.015603662034863 9.259687322722812 0 1.305462187404089 2.0 1.6237125054200234 0.0 {I|L}A{I|L}[KC]HHS{I|L};{I|L}A{I|L}[KC]HHTV;[{I|L}A]AA[KQ]GYS{I|L};{I|L}A{I|L}[KC]{[TV]|[{I|L}S]}HH;[{I|L}V]N[KQ]GYS{I|L};[{I|L}V]GG[KQ]GYS{I|L} 7.0484;6.1411;4.9157;4.4732;3.5201;2.6178 -;-;-;-;-;- 234 + 1 1.514 60755.9 1.0 2610 5458 8068 SUDHL4_400M_050219_2,8070 SUDHL4_400M_050219_2,8070,ALLERGYSL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8071 43.313 627.0 170840.0 25 0 22359.0 31414 RPKAGGGR 8 129 399.7383824730871 797.4622120129742 2 399.7382690310478 MULTI CID FTMS 0 0 0 8068 150320.421875 0.8647764895304637 -2 0.0331611633300781 3 Unmodified _RPKAGGGR_ nc|ENSG00000126883|P35658-5|NUP214 2.302733041254933 0.8103549651115762 6 R 1 7 11.109 0.0 0.0 1.3931 0.0 0.0 623.3507293243008 0.0 623.3507293243008 0.0 7.129843661361406 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 1.3931 + + 14 + 1 1.514 87105.8 1.0 2611 5458 8068 SUDHL4_400M_050219_2,8071 SUDHL4_400M_050219_2,8071,RPKAGGGR False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 8072 43.327 800.0 95254.0 25 0 7138.2 + 33712 SKSNLALT 8 120 417.2392020985176 832.4638512638353 2 417.2389099001884 MULTI CID FTMS 0 0 0 8068 137426.625 1.0 0 0.0 4 Unmodified _SKSNLALT_ REV__ENST00000485887.1_1_2:25043436-25046221:-|nuORF 4.75600775471527 0.7954636275367004 6 P 1 -1 8.0989 0.0 0.0 0.97289 0.0 0.0 717.4003574667635 0.0 717.4003574667635 0.0 5.880456295278405 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.97289 - 24 + 1 1.514 65225.8 0.4900000095367431 2612 5458 8068 SUDHL4_400M_050219_2,8072 SUDHL4_400M_050219_2,8072,SKSNLALT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8074 43.333 202.0 259630.0 25 0 37465.0 -1 ILLDNDHYAM 10 66 610.7839305846886 1219.5533082361771 2 610.7846557497978 MULTI CID FTMS 0 0 0 8073 190458.453125 0.2438874382015044 4 -0.0815887451171875 1 Oxidation (M) _ILLDNDHYAM(Oxidation (M))_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 39.94969957227396 0.1580982266129622 6 {I|L}{I|L}{I|L}D[DN]{[WN]|[YH]}A{M(Oxidation (M))|F} 10 -1 + 61.904 0.0 0.0 5.076 5.076 90.123 0.0 0.0 0.0 40.58037176564042 3.728721920568248 3.728721920568248 61.90404723492961 0 0.4247425010840047 2.0 0.3494850021680094 0.3807196863200844 {I|L}{I|L}{I|L}D[DN]{[WN]|[YH]}A{M(Oxidation (M))|F} 5.076 + + 104 + 1 1.514 44931.4 1.0 2613 5459 8073 SUDHL4_400M_050219_2,8074 SUDHL4_400M_050219_2,8074,ILLDNDHYAM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8075 43.338 261.0 254300.0 25 0 27159.0 + 18877 LASVVQPFR 9 98 508.7972724064079 1015.5799918796158 2 508.7975952029228 MULTI CID FTMS 0 0 0 8073 139030.609375 0.5531307606397349 10 -0.3109474182128906 2 Unmodified _LASVVQPFR_ REV__ENSG00000196411|ENST00000358173|EPHB4;REV__ENST00000487222.5_1_7:100401085-100421908:-|nuORF 7.910154910731844 0.6385446671287552 6 [{I|L}A]SY 4 -1 17.184 0.0 0.0 1.692 0.0 0.0 0.0 578.3426621279158 578.3426621279158 7.786751831097742 0.0 0.0 0.0 0 0.5 1.154901959985743 0.0 0.0 [{I|L}A]SY 1.692 - 36 1 1.514 55546.0 1.0 2614 5459 8073 SUDHL4_400M_050219_2,8075 SUDHL4_400M_050219_2,8075,LASVVQPFR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8077 43.348 356.0 142620.0 25 0 11770.0 + 23820 LVFAVSVGTV 10 85 496.2948582988565 990.5751636645132 2 496.2948791384697 MULTI CID FTMS 0 0 0 8076 114596.7265625 0.93237755886275 1 -0.0241508483886718 1 Unmodified _LVFAVSVGTV_ REV__ENSG00000105609|ENST00000449561|LILRB5;REV__nc|ENSG00000105609|O75023-2|LILRB5;REV__nc|ENSG00000105609|O75023|LILRB5 25.399314129420983 0.3980215340001851 6 [{I|L}V]{M(Oxidation (M))|F} 3 -1 24.679 0.0 0.0 2.4914 0.0 0.0 0.0 628.3286837213499 628.3286837213499 9.841284356197232 0.0 0.0 0.0 0 0.3252574989159953 1.3979400086720375 0.0 0.0 [{I|L}V]{M(Oxidation (M))|F} 2.4914 + + 186 + 1 1.514 45859.8 1.0 2615 5460 8076 SUDHL4_400M_050219_2,8077 SUDHL4_400M_050219_2,8077,LVFAVSVGTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8078 43.362 800.0 95399.0 25 0 19427.0 -1 0 47 1197.4845601848056 3589.431851154617 3 1197.819995105267 MULTI CID FTMS 0 0 0 8076 122717.4296875 1.0 0 0.0 2 6 {I|L}Q 2 -1 8.5835 0.0 0.0 0.23913 0.0 0.0 2368.8447672696548 976.4216402643186 3345.266407533973 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Q 0.23913 - 17 + 1 1.514 66222.7 0.4699999988079071 2616 5460 8076 SUDHL4_400M_050219_2,8078 SUDHL4_400M_050219_2,8078, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8080 43.367 83.0 528460.0 25 0 50762.0 + 31012 RLFDEPQLA 9 66 544.791167328316 1087.5677817234318 2 544.7910034060478 MULTI CID FTMS 0 0 0 8079 455325.21875 0.4268657584826433 15 -0.4115486145019531 1 Unmodified _RLFDEPQLA_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1 11.494710602746466 0.5255349189887087 6 EPQ[{I|L}A] 5 4 26.695 0.0 0.0 2.4545 0.0 0.0 531.281053611525 0.0 531.281053611525 0.0 20.24104976468614 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + EPQ[{I|L}A] 2.4545 + + 47 1 1.514 38249.8 1.0 2617 5461 8079 SUDHL4_400M_050219_2,8080 SUDHL4_400M_050219_2,8080,RLFDEPQLA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8081 43.37 151.0 281540.0 25 0 40089.0 + 1508 ALHRETTK 8 60 478.2694832212155 954.5244135092312 2 478.2695190310478 MULTI CID FTMS 0 0 0 8079 323453.1875 0.8280589072536603 -3 0.0831298828125 2 Unmodified _ALHRETTK_ REV__ENSG00000143951|ENST00000272321|WDPCP;REV__ENST00000409835.5_1_2:63587012-63815411:-|nuORF;REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF;REV__nc|ENSG00000143951|O95876-2|WDPCP;REV__nc|ENSG00000143951|O95876-3|WDPCP 2.302733041254933 0.8103549651115762 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.514 41796.2 1.0 2618 5461 8079 SUDHL4_400M_050219_2,8081 SUDHL4_400M_050219_2,8081,ALHRETTK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8082 43.374 180.0 451470.0 25 0 111150.0 12273 GRGAGKHV 8 93 391.224765347858 780.4349777625159 2 391.2249023318291 MULTI CID FTMS 0 0 0 8079 305885.1875 0.960645090754776 2 -0.046173095703125 3 Unmodified _GRGAGKHV_ ENSG00000103404|ENST00000219689|USP31 0.7936320650641473 0.8195151834710337 6 S 1 8 1.7827 0.0 0.0 0.22843 0.0 0.0 548.3103114800925 142.06389795474846 690.374209434841 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.22843 - 9 + 1 1.514 68619.9 1.0 2619 5461 8079 SUDHL4_400M_050219_2,8082 SUDHL4_400M_050219_2,8082,GRGAGKHV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8083 43.387 800.0 90056.0 25 0 7285.8 -1 0 92 873.9124814412024 1745.8104099492048 2 874.9033080935478 MULTI CID FTMS 0 0 0 8079 105278.8359375 0.4904272776403924 -8 0.2089881896972656 4 6 EEPNNNADQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{I|L}Q 15 -1 + 54.153 0.0 0.0 3.1019 3.1019 73.085 0.0 0.0 0.0 33.03395642852614 6.242209500285014 6.242209500285014 3.0102999566398125 0 0.0 0.0 0.3252574989159953 0.6109243748081782 EEPNNNADQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{I|L}Q;EEPD{I|L}NADQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{I|L}Q;EEPNVEADQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{I|L}Q;EEPNNNWQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{I|L}Q;EEPD{I|L}NWQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{I|L}Q;EEPNVEWQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{I|L}Q;EEPNNNADQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]Q{I|L};EEPD{I|L}NADQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]Q{I|L};EEPNVEADQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]Q{I|L};EEPNNNWQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]Q{I|L} 3.1019;2.9295;2.8286;2.7187;2.5463;2.4454;2.4096;2.2372;2.1364;2.0264 -;-;-;-;-;-;-;-;-;- 796 + 1 1.514 56158.3 0.550000011920929 2620 5461 8079 SUDHL4_400M_050219_2,8083 SUDHL4_400M_050219_2,8083, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8084 43.399 672.0 89751.0 25 0 5944.3 + 422 AEEKYKTV 8 107 484.2579878287391 966.5014227242782 2 484.2577392458916 MULTI CID FTMS 0 0 0 8079 88319.9296875 0.8793092465076571 1 -0.0401573181152343 5 Unmodified _AEEKYKTV_ REV__ENSG00000214753|ENST00000301785|HNRNPUL2 14.581692164780916 0.6954967302934248 6 CTV 3 -1 23.672 0.0 0.0 2.4493 0.0 0.0 645.3690812709564 0.0 645.3690812709564 0.0 9.69273760456403 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 CTV 2.4493 - 78 + 1 1.514 51303.3 1.0 2621 5461 8079 SUDHL4_400M_050219_2,8084 SUDHL4_400M_050219_2,8084,AEEKYKTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8085 43.402 171.0 255690.0 25 0 25745.0 + 29392 QLAQFVHEV 9 85 535.7858198984745 1069.557086863749 2 535.7854492068291 MULTI CID FTMS 0 0 0 8079 179163.703125 0.2798450670731386 6 -0.21746826171875 6 Unmodified _QLAQFVHEV_ ENSG00000013573|ENST00000542838|DDX11;ENST00000535158.5_1_12:31227017-31242187:+|nuORF;ENST00000536265.5_1_12:31227017-31242486:+|nuORF;ENST00000539757.1_1_12:9440801-9462940:+|nuORF;ENST00000542242.1_1_12:31240692-31242486:+|nuORF;ENST00000542244.5_1_12:31237807-31242486:+|nuORF;ENST00000543026.5_1_12:31240692-31242187:+|nuORF;nc|ENSG00000013573|Q96FC9-3|DDX11;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000013573|Q96FC9|DDX11;nc|ENSG00000214826|Q92771|DDX12P;nc|ENSG00000256263|A8MPP1|DDX11L8 13.90604991867851 0.4602628045680013 6 [Q{I|L}]C(Carbamidomethyl (C))V 4 6 30.679 0.0 0.0 2.8684 0.0 0.0 0.0 566.2722262018186 566.2722262018186 20.221361390363604 0.0 0.0 0.0 0 0.2887254899964357 1.6989700043360187 0.0 0.0 [Q{I|L}]C(Carbamidomethyl (C))V 2.8684 - 274 + 1 1.514 39808.5 1.0 2622 5461 8079 SUDHL4_400M_050219_2,8085 SUDHL4_400M_050219_2,8085,QLAQFVHEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8087 43.407 20.0 1742300.0 25 0 410760.0 42132 VRRLPGGG 8 54 406.2485091000349 810.4824652668699 2 406.2484313845634 MULTI CID FTMS 0 0 0 8086 2882994.5 0.6919944395512421 2 -0.0709114074707031 1 Unmodified _VRRLPGGG_ ENST00000497505.5_1_2:203879615-203880929:+|nuORF 0.0 0.8243325171867699 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.514 34906.5 1.0 2623 5462 8086 SUDHL4_400M_050219_2,8087 SUDHL4_400M_050219_2,8087,VRRLPGGG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8088 43.408 45.0 915800.0 25 0 214190.0 + 40947 VLTTVAPK 8 62 414.7619608986876 827.5093688641753 2 414.7617065310478 MULTI CID FTMS 0 0 0 8086 1302718.375 0.7269545049498908 3 -0.1310501098632812 2 Unmodified _VLTTVAPK_ REV__ENSG00000172534|ENST00000310441|HCFC1;REV__nc|ENSG00000172534|P51610-2|HCFC1;REV__nc|ENSG00000172534|P51610-4|HCFC1 0.6903765706972694 0.8201419426409876 6 P 1 -1 3.0989 0.0 0.0 0.37449 0.0 0.0 651.4044321960097 76.02488123111561 727.4293134271253 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.37449 + + 3 + 1 1.514 35940.7 1.0 2624 5462 8086 SUDHL4_400M_050219_2,8088 SUDHL4_400M_050219_2,8088,VLTTVAPK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8090 43.422 614.0 166100.0 25 0 7446.4 -1 0 116 901.445585799672 1800.8766186661437 2 901.9501220583916 MULTI CID FTMS 0 0 0 8089 105290.546875 0.817712803920549 -2 0.046173095703125 1 6 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADH[R{M(Oxidation (M))|F}]Y{I|L}SQ 15 -1 + 90.107 0.0 0.0 5.0035 5.0035 79.692 0.0 0.0 0.0 3.906177249546431 12.885577336266806 3.906177249546431 3.906177249546431 0 1.3979400086720375 2.0 0.3807196863200844 1.2689301784845295 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADH[R{M(Oxidation (M))|F}]Y{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PNAR{M(Oxidation (M))|F}HDY{I|L}QA{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNAR{M(Oxidation (M))|F}HDY{I|L}KA{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNAR{M(Oxidation (M))|F}HDY{I|L}KV{[QS]|[NT]};{[QV]|[N{I|L}]|[RA]|[KV]}PNAR{M(Oxidation (M))|F}HDY{I|L}QV[KS];{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWH[R{M(Oxidation (M))|F}]Y{I|L}SQ;{[QV]|[N{I|L}]|[RA]|[KV]}PNAR{M(Oxidation (M))|F}HDY{I|L}NC[QP];{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADH[R{M(Oxidation (M))|F}]YS{I|L}Q;[NP]{I|L}NAR{M(Oxidation (M))|F}HDY{I|L}KA{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NAR{M(Oxidation (M))|F}HDY{I|L}QA{[QD]|[EN]|[WG]|[KD]|[RS]} 5.0035;4.7866;4.7866;4.6888;4.6888;4.632;4.5641;4.3111;4.288;4.288 -;-;-;-;-;-;-;-;-;- 3231 + 1 1.514 72061.2 1.0 2625 5463 8089 SUDHL4_400M_050219_2,8090 SUDHL4_400M_050219_2,8090, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8091 43.436 800.0 166490.0 25 0 26933.0 -1 0 129 396.8017408450874 791.5889287569748 2 396.8012878298759 MULTI CID FTMS 0 0 0 8089 101671.6171875 0.6635091863166459 -3 0.0703239440917968 2 6 {I|L}{I|L}{I|L} 3 -1 41.191 0.0 0.0 5.2035 0.0 0.0 0.0 449.3104647272094 449.3104647272094 20.39590623023813 0.0 0.0 0.0 0 1.1549471895720984 0.7958800173440752 0.0 0.0 {I|L}{I|L}{I|L} 5.2035 - 66 + 1 1.514 106209.0 0.4000000059604645 2626 5463 8089 SUDHL4_400M_050219_2,8091 SUDHL4_400M_050219_2,8091, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8092 43.449 800.0 178350.0 25 0 6330.7 + 32704 SEAFVTWGA 9 103 967.4514466110415 966.4441701444416 1 969.4588500857352 MULTI CID FTMS 0 0 0 8089 209539.328125 0.8719830047245872 -1 0.0060157775878906 3 Unmodified _SEAFVTWGA_ REV__ENSG00000204687|ENST00000377127|MAS1L 34.10243960390752 0.1078313939113124 6 [{M(Oxidation (M))|F}V]WQTAES 8 -1 + 38.8 0.0 0.0 4.0147 4.0147 80.185 0.0 0.0 0.0 4.938871815334956 17.956101441130976 4.938871815334956 8.750612633916997 0 0.3054621874040891 0.0 0.6694451763165201 0.0 [{M(Oxidation (M))|F}V]WQTAES;[{M(Oxidation (M))|F}V]WSAAAES;[{M(Oxidation (M))|F}V]W[AG]TAES;[{M(Oxidation (M))|F}V]WQTATD;{[WS]|[C(Carbamidomethyl (C)){I|L}]}V{M(Oxidation (M))|F}AAAES;[{M(Oxidation (M))|F}V]WS{[NV]|[RG]}ES;{[WS]|[C(Carbamidomethyl (C)){I|L}]}V{M(Oxidation (M))|F}{[NV]|[RG]}ES;{[CP]|[EA]}SA[R{M(Oxidation (M))|F}]AES;S{M(Oxidation (M))|F}ATQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[PG];{[WS]|[C(Carbamidomethyl (C)){I|L}]}VM[KT]ES 4.0147;3.1093;3.0564;3.0451;2.9062;2.439;2.2359;2.2212;2.1451;2.0537 -;-;-;-;-;-;-;-;-;- 3321 1 1.514 98047.7 0.699999988079071 2627 5463 8089 SUDHL4_400M_050219_2,8092 SUDHL4_400M_050219_2,8092,SEAFVTWGA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8093 43.46 575.0 265140.0 25 0 67155.0 + 43778 YELDRHKL 8 101 537.2918639602728 0 537.2917968630791 PEAK CID FTMS 0 0 0 8089 143467.703125 0.3056329407475859 -3 0.0703239440917968 4 Unmodified _YELDRHKL_ REV__ENSG00000254685|ENST00000370898|FPGT;REV__nc|ENSG00000254685|O14772|FPGT 19.438996006549623 0.4285751805470146 6 {I|L} 1 -1 6.9897 0.0 0.0 0.65168 0.0 0.0 667.3790817102362 289.08311339641915 956.4621951066554 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.65168 + + 47 + 1 1.514 117702.8 1.0 2628 5463 8089 SUDHL4_400M_050219_2,8093 SUDHL4_400M_050219_2,8093,YELDRHKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8094 43.473 800.0 123460.0 25 0 27487.0 + -1 VITETVVEV 9 95 988.4517748129596 2962.333495039079 3 989.122607409954 MULTI CID FTMS 0 0 0 8089 111678.0703125 0.715158303670969 1 -0.0648956298828125 5 nc|ENSG00000109381|Q15723-3|ELF2;nc|ENSG00000109381|Q15723-2|ELF2;nc|ENSG00000109381|Q15723-4|ELF2;nc|ENSG00000109381|Q15723-1|ELF2;ENST00000514606.1_1_4:139988805-140005344:-|nuORF;ENSG00000109381|ENST00000686138|ELF2 6 VT 2 -1 14.974 0.0 0.0 0.50549 0.0 0.0 2319.9754150603667 439.2192782037719 2759.1946932641386 0.0 0.0 0.0 0.0 0 0.0 0.0 0.75 0.0 VT 0.50549 - 745 + 1 1.514 72253.2 0.5099999904632568 2629 5463 8089 SUDHL4_400M_050219_2,8094 SUDHL4_400M_050219_2,8094, False False VITETVVEV 43.473389 989.122607409954 1167715.625 8089.0 nc|ENSG00000109381|Q15723-3|ELF2;;nc|ENSG00000109381|Q15723-2|ELF2;;nc|ENSG00000109381|Q15723-4|ELF2;;nc|ENSG00000109381|Q15723-1|ELF2;;ENST00000514606.1_1_4:139988805-140005344:-|nuORF;;ENSG00000109381|ENST00000686138|ELF2 2.5874348481496177 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8096 43.479 66.0 745660.0 25 0 73460.0 + 24633 MLPPPPLTA 9 85 468.7639676812421 935.5133824292842 2 468.7632629275322 MULTI CID FTMS 0 0 0 8095 830383.25 1.0 0 0.0 1 Unmodified _MLPPPPLTA_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 56.541270873467816 0.0279970378729908 6 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GH{I|L}{I|L}DS 8 6 35.471 0.0 0.0 3.7916 0.0 0.0 0.0 66.03568445377186 66.03568445377186 23.252867283221747 0.0 0.0 0.0 0 1.3129529932484498 2.0 0.8494850021680094 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GH{I|L}{I|L}DS 3.7916 - 173 + 1 1.514 42456.3 1.0 2630 5464 8095 SUDHL4_400M_050219_2,8096 SUDHL4_400M_050219_2,8096,MLPPPPLTA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8097 43.482 139.0 235350.0 25 0 38865.0 16229 IVNKQVQGN 9 58 500.2829222482266 998.5512915632534 2 500.2830688357353 MULTI CID FTMS 0 0 0 8095 297009.96875 0.4039562840805423 15 -0.4724082946777344 2 Unmodified _IVNKQVQGN_ ENST00000452720.1_1_2:232424765-232425035:+|nuORF 1.844237919475145 0.850302753031785 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.514 32092.8 1.0 2631 5464 8095 SUDHL4_400M_050219_2,8097 SUDHL4_400M_050219_2,8097,IVNKQVQGN False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8098 43.486 234.0 140940.0 25 0 14195.0 + -1 RFIVRPMP 8 67 516.2962701045436 1030.5779872758872 2 516.2961913943291 MULTI CID FTMS 0 0 0 8095 227369.171875 0.4497044366062119 11 -0.2783546447753906 3 Oxidation (M) _RFIVRPM(Oxidation (M))P_ REV__ENSG00000136937|ENST00000375147|NCBP1 2.302733041254933 0.8103549651115762 6 D 1 -1 1.5938 0.0 0.0 0.15465 0.0 0.0 844.4771704807685 68.05137048892811 912.5285409696966 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.15465 - 3 + 1 1.514 29825.8 1.0 2632 5464 8095 SUDHL4_400M_050219_2,8098 SUDHL4_400M_050219_2,8098,RFIVRPMP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8099 43.489 165.0 192910.0 25 0 16878.0 23112 LSPDKKWL 8 72 493.7861167870489 985.5576806408978 2 494.2829162478447 MULTI CID FTMS 0 0 0 8095 170036.875 0.3071323469147456 17 -0.5409431457519531 4 Unmodified _LSPDKKWL_ ENSG00000227345|ENST00000616448|PARG;nc|ENSG00000227345|Q86W56-2|PARG;nc|ENSG00000227345|Q86W56-3|PARG;nc|ENSG00000227345|Q86W56-4|PARG 14.581692164780916 0.6954967302934248 6 V 1 8 12.474 0.0 0.0 1.2657 0.0 0.0 868.4782719268338 0.0 868.4782719268338 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2657 - 41 + 1 1.514 33473.7 1.0 2633 5464 8095 SUDHL4_400M_050219_2,8099 SUDHL4_400M_050219_2,8099,LSPDKKWL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8100 43.495 319.0 269070.0 25 0 34611.0 + -1 IVVVPYKRC 9 101 567.3296542590296 1132.644755584859 2 567.3291503787041 MULTI CID FTMS 0 0 0 8095 141945.21875 0.25630555242072 -12 0.3239479064941406 5 Carbamidomethyl (C) _IVVVPYKRC(Carbamidomethyl (C))_ REV__ENSG00000147119|ENST00000276055|CHST7 4.75600775471527 0.7486543447549536 6 S 1 -1 2.4743 0.0 0.0 0.21845 0.0 0.0 583.3669368366153 459.2231539361938 1042.5900907728092 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.21845 - 18 + 1 1.514 74357.2 1.0 2634 5464 8095 SUDHL4_400M_050219_2,8100 SUDHL4_400M_050219_2,8100,IVVVPYKRC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8101 43.502 372.0 289910.0 25 0 17209.0 + + 23847 VLAETLTQV 9 139 487.284552316104 972.554551699008 2 487.2825500369072 MULTI CID FTMS 0 0 0 8095 143078.359375 0.7421493540506967 -1 0.0648956298828125 6 Unmodified _LVHHALANV_ ENSG00000005339|ENST00000262367|CREBBP;nc|ENSG00000005339|Q92793-2|CREBBP 13.50788311687929 0.4710407108020397 6 [{I|L}V]N 3 -1 19.922 0.0 0.0 2.0484 0.0 0.0 0.0 643.3365700918391 643.3365700918391 6.82258126592544 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}V]N 2.0484 - 427 1 1.514 87222.7 1.0 2635 5464 8095 SUDHL4_400M_050219_2,8101 SUDHL4_400M_050219_2,8101,LVHHALANV False False VLAETLTQV 43.501764 487.282550036907 999318.625 8095.0 ENSG00000005339|ENST00000262367|CREBBP;;nc|ENSG00000005339|Q92793-2|CREBBP 5.24546750386556 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8102 43.516 800.0 42321.0 25 0 6253.3 -1 0 52 983.1202372877732 2946.33888246352 3 983.4554931521416 MULTI CID FTMS 0 0 0 8095 118547.109375 1.0 0 0.0 7 6 [NP]{I|L} 3 -1 5.9421 0.0 0.0 0.20168 0.0 0.0 0.0 2619.1354882586947 2619.1354882586947 0.4575749056067497 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L} 0.20168 - 21 1 1.514 30290.0 0.5299999713897705 2636 5464 8095 SUDHL4_400M_050219_2,8102 SUDHL4_400M_050219_2,8102, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8103 43.529 800.0 84677.0 25 0 5126.8 + 42033 VQSSIASAF 9 105 909.4682780664804 908.4610015998802 1 909.4699584841728 MULTI CID FTMS 0 0 0 8095 125275.609375 0.9580609016239372 2 -0.0664749145507812 8 Unmodified _VQSSIASAF_ ENSG00000072818|ENST00000158762|ACAP1 57.72198328787511 0.0273433238377839 6 {[QV]|[N{I|L}]|[RA]|[KV]}SS{I|L}TQ{M(Oxidation (M))|F} 8 3 + 50.293 0.0 0.0 5.5361 5.5361 77.102 0.0 0.0 0.0 11.757080601689488 18.97247041756418 11.757080601689488 0.6284945170861462 0 0.3054621874040891 1.2218487496163564 1.5 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}SS{I|L}TQ{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}SS{I|L}ASA{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}P[TA]AS[HV];{[QV]|[N{I|L}]|[RA]|[KV]}SS{I|L}T[AG]{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}SATVSA{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}SS[WR]{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}NA{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F};{[QV]|[N{I|L}]|[RA]|[KV]}SS[QT]{I|L}{M(Oxidation (M))|F};{[WT]|[RM]}N{I|L}TQ{M(Oxidation (M))|F};{[WT]|[RM]}ARTQ{M(Oxidation (M))|F} 5.5361;5.4669;4.5406;4.5166;4.2659;4.0668;4.0016;3.6716;3.6212;3.6009 -;+;-;-;-;-;-;-;-;- + 2191 1 1.514 50793.9 0.550000011920929 2637 5464 8095 SUDHL4_400M_050219_2,8103 SUDHL4_400M_050219_2,8103,VQSSIASAF True True VQSSIASAF 43.529459 909.469958484173 1003766.1875 8095.0 ENSG00000072818|ENST00000158762|ACAP1 1.4065343936284382 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8104 43.534 215.0 273230.0 25 0 18962.0 23909 LVNDIRKF 8 110 502.7967919463931 1003.5790309595862 2 502.7963439822197 MULTI CID FTMS 0 0 0 8095 90600.90625 0.6990625248655152 -3 0.1110687255859375 9 Unmodified _LVNDIRKF_ ENSG00000137962|ENST00000260526|ARHGAP29;nc|ENSG00000137962|Q52LW3-2|ARHGAP29 10.183394434864962 0.7604730176254005 6 V 1 7 10.0 0.0 0.0 0.99643 0.0 0.0 886.5000342328269 0.0 886.5000342328269 0.0 0.1671187774347515 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.99643 + + 127 + 1 1.514 51942.3 1.0 2638 5464 8095 SUDHL4_400M_050219_2,8104 SUDHL4_400M_050219_2,8104,LVNDIRKF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8106 43.538 34.0 1677100.0 25 0 160780.0 + 26194 NQFPGFKEV 9 95 533.271836850181 1064.529120767162 2 533.2719604372978 MULTI CID FTMS 0 0 0 8105 1395918.0 0.4287780742694314 7 -0.1557044982910156 1 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 38.17557092003332 0.0854718145212029 6 {[ET]|[MV]}AK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS] 9 9 + 41.458 0.0 0.0 3.8945 3.8945 75.988 0.0 0.0 0.0 3.6317790241282495 3.6317790241282495 3.6317790241282495 3.6317790241282495 0 1.0 0.0 0.8494850021680094 0.0 {[ET]|[MV]}AK{M(Oxidation (M))|F}V{M(Oxidation (M))|F}[HS];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}GP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ET]|[MV]}A{M(Oxidation (M))|F}KV{M(Oxidation (M))|F}[HS];{[ET]|[MV]}AK{M(Oxidation (M))|F}{M(Oxidation (M))|F}V[HS];{[QN]|[E{I|L}]|[KN]}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}GP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[ET]|[MV]}A{M(Oxidation (M))|F}K{M(Oxidation (M))|F}V[HS];{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}P[R{M(Oxidation (M))|F}]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[R{M(Oxidation (M))|F}]P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}V[WY]KEV;{[QN]|[E{I|L}]|[KN]}V[WY]EKV 3.8945;3.5533;3.5207;2.8179;2.4767;2.4441;2.172;1.7982;1.2956;0.89912 -;-;-;-;-;-;-;-;-;- 328 1 1.514 46971.6 1.0 2639 5465 8105 SUDHL4_400M_050219_2,8106 SUDHL4_400M_050219_2,8106,NQFPGFKEV True True NQFPGFKEV 43.538311 533.271960437298 147140160.0 8105.0 ENSG00000125870|ENST00000246071|SNRPB2;;ENST00000407763.2_1_6:149433147-149433330:-|nuORF;;ENSG00000077312|ENST00000243563|SNRPA 8.030230522155762 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8107 43.54 63.0 643180.0 25 0 136780.0 -1 LRLCKAWV 8 58 523.3035751559308 1044.5925973786616 2 523.3037597537041 MULTI CID FTMS 0 0 0 8105 695324.25 0.5924509866259046 13 -0.354522705078125 2 Carbamidomethyl (C) _LRLC(Carbamidomethyl (C))KAWV_ ENST00000332065.9_1_17:74078001-74078805:-|nuORF 2.577480529830294 0.808687252328423 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.514 39028.1 1.0 2640 5465 8105 SUDHL4_400M_050219_2,8107 SUDHL4_400M_050219_2,8107,LRLCKAWV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8109 43.546 168.0 244080.0 25 0 15951.0 2430 AQRESSAAW 9 79 503.2429419404651 1004.4713309477302 2 503.2432128787041 MULTI CID FTMS 0 0 0 8108 104158.75 0.5447441945603703 -7 0.2129592895507812 1 Unmodified _AQRESSAAW_ chr1:212686979-212688127|15|23.73|0.47|5.67|-|2|TE_info:L3,L3_dup3841,CR1,LINE,donor,-,212688127,212688769|BATF3,None|7 8.593279151180031 0.6146971463335029 6 [QA]{M(Oxidation (M))|F}R 4 7 14.935 0.0 0.0 1.4869 0.0 0.0 0.0 499.1725387936864 499.1725387936864 1.440162615404077 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3252574989159953 [QA]{M(Oxidation (M))|F}R 1.4869 - 63 1 1.514 37323.9 1.0 2641 5466 8108 SUDHL4_400M_050219_2,8109 SUDHL4_400M_050219_2,8109,AQRESSAAW False False False False TE_chimeric_transcript PXD020620_cell_line SUDHL4_400M_050219_2 8110 43.552 353.0 242440.0 25 0 28053.0 + 7646 EKGIAQFLAL 10 112 545.3170059693753 1088.6194590055504 2 545.3170654177666 MULTI CID FTMS 0 0 0 8108 148579.109375 0.8228479540391971 4 -0.1210365295410156 2 Unmodified _EKGIAQFLAL_ REV__ENSG00000261150|ENST00000615648|EPPK1 9.38312468134398 0.6832340498775793 6 EPT[{I|L}V] 5 -1 14.437 0.0 0.0 1.3262 0.0 0.0 531.2796496449437 0.0 531.2796496449437 0.0 5.167615170718314 0.0 0.0 0 0.0 0.0 0.0 0.0 EPT[{I|L}V] 1.3262 - 172 1 1.514 70899.1 1.0 2642 5466 8108 SUDHL4_400M_050219_2,8110 SUDHL4_400M_050219_2,8110,EKGIAQFLAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8111 43.566 800.0 131180.0 25 0 8923.4 -1 0 113 857.9007808244363 1713.7870087156723 2 858.4027587771416 MULTI CID FTMS 0 0 0 8108 82516.453125 0.1430461885304382 -4 0.1373863220214843 3 6 [MN]PN{I|L}NADC[QA]{I|L}S[VP]Q 16 -1 + 85.342 0.0 0.0 4.9797 4.9797 78.698 0.0 0.0 0.0 56.95940619637944 10.797349202424584 10.797349202424584 3.0546218740408904 0 0.6307196863200843 1.5228787452803376 1.0356668758921828 0.7742275032520141 [MN]PN{I|L}NADC[QA]{I|L}S[VP]Q;[MN]PN{I|L}NADQ{[CA]|SS}{I|L}S[VP]Q;[MN]PN{I|L}NADC[QA]SVP{I|L}Q;[MN]PN{I|L}NADCK[PS]S[VP]Q;[MN]PN{I|L}NADC[QA]S{I|L}[VP]Q;[MN]PN{I|L}NADQ{[CA]|SS}SVP{I|L}Q;[MN]PN{I|L}NWC[QA]{I|L}S[VP]Q;[MN]PN{I|L}NADQ{[CA]|SS}S{I|L}[VP]Q;[MN]PN{I|L}NADQ{[WT]|[RM]}S[VP]Q;[MN]PN{I|L}NADCK[RD][VP]Q 4.9797;4.8015;4.7833;4.7319;4.7286;4.6051;4.5882;4.5503;4.4405;4.4405 -;-;-;-;-;-;-;-;-;- 5003 + 1 1.514 73503.0 0.5099999904632568 2643 5466 8108 SUDHL4_400M_050219_2,8111 SUDHL4_400M_050219_2,8111, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8112 43.58 800.0 42198.0 25 0 9483.8 -1 0 38 1081.1172769073432 3240.3300013222297 3 1081.789111316204 MULTI CID FTMS 0 0 0 8108 64872.52734375 0.6012851439182041 -3 0.1313705444335937 4 6 C 1 -1 6.9897 0.0 0.0 0.21571 0.0 0.0 2159.786862749768 974.4935531038392 3134.2804158536064 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.21571 - 10 + 1 1.514 39822.5 0.449999988079071 2644 5466 8108 SUDHL4_400M_050219_2,8112 SUDHL4_400M_050219_2,8112, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8114 43.586 139.0 312980.0 25 0 43233.0 + 1585 ALLERGYSL 9 64 511.2875364544317 1020.5605199756636 2 511.2879211306572 MULTI CID FTMS 0 0 0 8113 250718.4375 0.254980176164412 3 -0.0811119079589843 1 Unmodified _ALLERGYSL_ ENSG00000182199|ENST00000328923|SHMT2;ENST00000553837.5_1_12:57625333-57628141:+|nuORF;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;ENST00000555774.5_1_12:57624752-57628141:+|nuORF;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;nc|ENSG00000182199|P34897-2|SHMT2;nc|ENSG00000182199|P34897-3|SHMT2 38.17557092003332 0.0854718145212029 6 S{I|L} 2 7 26.753 0.0 0.0 2.6214 0.0 0.0 802.4339005682401 0.0 802.4339005682401 0.0 -17.940228147639203 -17.940228147639203 0.0 0 0.8807196863200843 0.0 0.3252574989159953 0.0 + S{I|L} 2.6214 + + 32 + 1 1.514 41570.4 1.0 2645 5467 8113 SUDHL4_400M_050219_2,8114 SUDHL4_400M_050219_2,8114,ALLERGYSL True True ALLERGYSL 43.586479 511.287921130657 10629224.0 8113.0 ENST00000553837.5_1_12:57625333-57628141:+|nuORF;;ENSG00000182199|ENST00000328923|SHMT2;;ENST00000556825.5_1_12:57623475-57628141:+|nuORF;;nc|ENSG00000182199|P34897-2|SHMT2;;ENST00000557348.5_1_12:57623887-57628141:+|nuORF;;ENST00000554467.5_1_12:57627324-57627898:+|nuORF;;nc|ENSG00000182199|P34897-3|SHMT2;;ENST00000557433.5_1_12:57625333-57628141:+|nuORF;;ENST00000555774.5_1_12:57624752-57628141:+|nuORF 5.463503996531169 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8115 43.592 317.0 483980.0 25 0 53191.0 -1 0 132 865.8982197439032 1729.7818865546062 2 866.4008056521416 MULTI CID FTMS 0 0 0 8113 335533.90625 0.239663866108936 -9 0.30059814453125 2 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[PA]AQ 16 -1 + 82.899 0.0 0.0 4.7925 4.7925 79.198 0.0 0.0 0.0 50.18640876403289 15.476146931408294 15.476146931408294 4.065401804339558 0 1.2134679910804405 0.0 0.0 1.3754223615525998 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[PA]AQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NAD{[CT]|[{M(Oxidation (M))|F}G]}{I|L}AA[PA]AQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NADQ{[HG]|PP}H[PA]AQ;{[QD]|[EN]|[WG]|[KD]|[RS]}DN{I|L}NADQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[PA]AQ;{[QD]|[EN]|[WG]|[KD]|[RS]}DN{I|L}NAD{[CT]|[{M(Oxidation (M))|F}G]}{I|L}AA[PA]AQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NWQ{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A[PA]AQ;{[QD]|[EN]|[WG]|[KD]|[RS]}DN{I|L}NADQ{[HG]|PP}H[PA]AQ;[QA][VS]A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NW{[CT]|[{M(Oxidation (M))|F}G]}{I|L}AA[PA]AQ;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NWQ{[HG]|PP}H[PA]AQ 4.7925;4.5574;4.5166;4.4961;4.2611;4.2377;4.2203;4.0566;4.0017;3.9618 -;-;-;-;-;-;-;-;-;- 2012 + 1 1.514 104380.4 1.0 2646 5467 8113 SUDHL4_400M_050219_2,8115 SUDHL4_400M_050219_2,8115, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8116 43.606 800.0 165220.0 25 0 30344.0 -1 LSCFMEEPAP 10 130 590.753661880315 1179.49277082743 2 590.7538329958916 MULTI CID FTMS 0 0 0 8113 109480.65625 0.4022608897736722 -3 0.1063995361328125 3 Carbamidomethyl (C) _LSC(Carbamidomethyl (C))FMEEPAP_ ENSG00000198742|ENST00000361368|SMURF1;nc|ENSG00000198742|Q9HCE7|SMURF1 20.453626601364224 0.5043500229302764 6 {[TV]|[{I|L}S]}Y[C(Carbamidomethyl (C))M]YN{I|L} 8 -1 34.32 0.0 0.0 2.9098 0.0 0.0 0.0 132.04563318424064 132.04563318424064 11.924712680444358 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.5994850021680094 {[TV]|[{I|L}S]}Y[C(Carbamidomethyl (C))M]YN{I|L} 2.9098 - 651 + 1 1.514 102615.7 0.5199999809265137 2647 5467 8113 SUDHL4_400M_050219_2,8116 SUDHL4_400M_050219_2,8116,LSCFMEEPAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8118 43.612 172.0 261980.0 25 0 19300.0 + + 31567 KLLPEYPGV 9 80 508.7972724064079 1015.5799918796158 2 508.7971069216728 MULTI CID FTMS 0 0 0 8117 187098.25 0.7443669980451978 19 -0.7794151306152344 1 Unmodified _RQLSLFGPV_ nc|ENSG00000228716|P00374-2|DHFR;ENSG00000228716|ENST00000439211|DHFR;ENSG00000178700|ENST00000314636|DHFR2 4.3292370932331545 0.7635526921153418 6 V 1 -1 11.594 0.0 0.0 1.1416 0.0 0.0 898.5004534658448 0.0 898.5004534658448 0.0 1.1092437480817807 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1416 + + 26 + 1 1.514 42460.8 1.0 2648 5468 8117 SUDHL4_400M_050219_2,8118 SUDHL4_400M_050219_2,8118,RQLSLFGPV False False KLLPEYPGV 43.612006 508.797106921673 1522707.75 8117.0 nc|ENSG00000228716|P00374-2|DHFR;;ENSG00000228716|ENST00000439211|DHFR;;ENSG00000178700|ENST00000314636|DHFR2 2.1184605161348977 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8119 43.624 690.0 126840.0 25 0 10696.0 + 8725 KLAEGVLDV 9 121 472.2755725874823 942.5365922417644 2 472.2764770388603 MULTI CID FTMS 0 0 0 8117 102846.6953125 0.8027637234120335 -1 0.0263252258300781 2 Unmodified _EVLQKIDV_ nc|ENSG00000183530|Q5THK1-3|PRR14L;nc|ENSG00000183530|Q5THK1-2|PRR14L;nc|ENSG00000183530|Q5THK1-4|PRR14L;ENSG00000183530|ENST00000327423|PRR14L 41.8396318013385 0.2035142800366642 6 {NN|[MP]|[D{I|L}]|[EV]}Q{I|L}K{I|L}DV 8 2 + 70.003 0.0 0.0 7.4271 7.4271 84.413 0.0 0.0 0.0 5.494630762369823 16.40978057358332 5.494630762369823 1.972805581256196 0 1.1861818737241734 1.3979400086720375 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}Q{I|L}K{I|L}DV;{NN|[MP]|[D{I|L}]|[EV]}GA{I|L}K{I|L}DV;[DV]AA{I|L}K{I|L}DV;{[TV]|[{I|L}S]}Q{I|L}R{I|L}DV;{[TV]|[{I|L}S]}Q{I|L}GV{I|L}DV;[DV]KVR{I|L}DV;[DV]KRV{I|L}DV;[DV]KVGV{I|L}DV;{NN|[MP]|[D{I|L}]|[EV]}GRR{I|L}DV;{[TV]|[{I|L}S]}[AG]{I|L}R{I|L}DV 7.4271;7.2178;6.8441;6.5412;6.2703;6.0858;6.0243;5.8149;5.6861;5.5585 -;-;-;-;-;-;-;-;-;- 983 1 1.514 73119.4 1.0 2649 5468 8117 SUDHL4_400M_050219_2,8119 SUDHL4_400M_050219_2,8119,EVLQKIDV False False KLAEGVLDV 43.623986 472.27647703886 598178.1875 8117.0 nc|ENSG00000183530|Q5THK1-3|PRR14L;;nc|ENSG00000183530|Q5THK1-2|PRR14L;;nc|ENSG00000183530|Q5THK1-4|PRR14L;;ENSG00000183530|ENST00000327423|PRR14L 3.991985003153483 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8120 43.638 800.0 44093.0 25 0 9271.3 -1 0 38 1197.4845601848056 3589.431851154617 3 1198.156298816204 MULTI CID FTMS 0 0 0 8117 72229.3515625 0.6362591498722301 6 -0.1032676696777343 3 6 T 1 -1 6.9897 0.0 0.0 0.19473 0.0 0.0 2997.1688639493423 488.1854647272094 3485.354328676552 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.19473 - 3 + 1 1.514 35800.8 0.3899999856948852 2650 5468 8117 SUDHL4_400M_050219_2,8120 SUDHL4_400M_050219_2,8120, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8122 43.645 219.0 360800.0 25 0 17938.0 -1 0 82 873.9124814412024 1745.8104099492048 2 873.9157592654228 MULTI CID FTMS 0 0 0 8121 310484.25 0.9757855221478506 -1 0.03173828125 1 6 [MN]PN{I|L}NEAQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{I|L}Q 15 -1 + 102.9 0.0 0.0 5.8943 5.8943 92.424 0.0 0.0 0.0 22.846395794758124 12.525749891599531 12.525749891599531 33.67976785294594 0 1.6237125054200234 1.5228787452803376 0.3807196863200844 1.079689690656103 [MN]PN{I|L}NEAQ{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[Q{I|L}]{I|L}Q;[NP]{I|L}N[QP]AQAEN{I|L}[Y{M(Oxidation (M))|F}]Q;[NP]{I|L}N[QP]AQAEN[Y{M(Oxidation (M))|F}]{I|L}Q;[NP]{I|L}N[QP]AQAEN{I|L}HG{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NEAH[YV]G{M(Oxidation (M))|F}{I|L}[MN]Q;[NP]{I|L}NEAH[YR]{M(Oxidation (M))|F}{I|L}[MN]K;[NP]{I|L}NEAH{[WT]|[RM]}N{I|L}[Y{M(Oxidation (M))|F}]Q;[NP]{I|L}NEAH{[WT]|[RM]}N[Y{M(Oxidation (M))|F}]{I|L}K;[NP]{I|L}NEAH[YV]G{M(Oxidation (M))|F}[MN]{I|L}Q;[NP]{I|L}NEAH[YR]{M(Oxidation (M))|F}[MN]{I|L}Q 5.8943;3.9651;3.6177;3.4146;3.2432;3.1333;3.126;2.7786;2.6982;2.5883 -;-;-;-;-;-;-;-;-;- 1100 + 1 1.514 57400.9 1.0 2651 5469 8121 SUDHL4_400M_050219_2,8122 SUDHL4_400M_050219_2,8122, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8123 43.649 265.0 236900.0 25 0 27987.0 + -1 VLCPPELK 8 97 478.2694832212155 954.5244135092312 2 478.2695190310478 MULTI CID FTMS 0 0 0 8121 249507.046875 0.6387525013566308 5 -0.0715293884277343 2 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))PPELK_ REV__ENSG00000142207|ENST00000382751|URB1 11.114462752807354 0.7467182956244686 6 V 1 -1 11.594 0.0 0.0 1.2146 0.0 0.0 837.4448827248546 0.0 837.4448827248546 0.0 1.6789605096159654 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2146 + + 32 + 1 1.514 54345.3 1.0 2652 5469 8121 SUDHL4_400M_050219_2,8123 SUDHL4_400M_050219_2,8123,VLCPPELK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8124 43.652 95.0 613710.0 25 0 71541.0 + 16967 KIQEILTQV 9 82 536.3240457674104 1070.6335386016208 2 536.3242065310478 MULTI CID FTMS 0 0 0 8121 374105.71875 0.3650854832615293 -7 0.2353744506835937 3 Unmodified _KIQEILTQV_ ENSG00000136231|ENST00000258729|IGF2BP3;ENST00000454907.1_1_6:167114584-167114857:-|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3 47.7319792270244 0.0453426645642791 6 [AG]{I|L}E{I|L}K{I|L}TN{I|L} 10 6 + 52.851 0.0 0.0 4.9365 4.9365 78.325 0.0 0.0 0.0 9.324627351160828 6.689615513722202 6.689615513722202 3.0102999566398125 0 0.7306883134323936 1.6989700043360187 0.8807196863200843 0.0 [AG]{I|L}E{I|L}K{I|L}TN{I|L};[AG]{I|L}EK{I|L}{I|L}TN{I|L};[AG]{I|L}KE{I|L}{I|L}TN{I|L};{[QN]|[E{I|L}]|[KN]}Q{I|L}K{I|L}TN{I|L};[Q{I|L}]E{I|L}K{I|L}TN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AA{I|L}K{I|L}TN{I|L};{[QN]|[E{I|L}]|[KN]}QK{I|L}{I|L}TN{I|L};[Q{I|L}]EK{I|L}{I|L}TN{I|L};{NN|[MP]|[D{I|L}]|[EV]}AAK{I|L}{I|L}TN{I|L};[{I|L}A]GE{I|L}K{I|L}TN{I|L} 4.9365;4.6553;4.0679;4.0655;4.0113;3.8303;3.7843;3.7302;3.5491;3.523 -;-;-;-;-;-;-;-;-;- 354 1 1.514 49808.2 1.0 2653 5469 8121 SUDHL4_400M_050219_2,8124 SUDHL4_400M_050219_2,8124,KIQEILTQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8125 43.658 379.0 234820.0 25 0 14565.0 24059 LWYLSLEEV 9 95 576.3007756876899 1150.5869984421795 2 576.3007690310478 MULTI CID FTMS 0 0 0 8121 160951.609375 0.6423558374301235 -2 0.0580635070800781 4 Unmodified _LWYLSLEEV_ ENSG00000256223|ENST00000248211|ZNF10 26.88365393820708 0.1891292719743517 6 Y{I|L}EEV 5 4 44.068 0.0 0.0 3.83 0.0 0.0 499.2760487287125 0.0 499.2760487287125 0.0 27.87015633863859 0.0 0.0 0 0.6109243748081782 0.0 0.0 0.0 Y{I|L}EEV 3.83 - 110 1 1.514 70762.6 1.0 2654 5469 8121 SUDHL4_400M_050219_2,8125 SUDHL4_400M_050219_2,8125,LWYLSLEEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8126 43.661 124.0 391220.0 25 0 30136.0 + 18368 KVPEIEVTV 9 90 507.2966867413238 1012.5788205494476 2 507.2973510622978 MULTI CID FTMS 0 0 0 8121 227520.484375 0.4409745156031264 -5 0.1644630432128906 5 Unmodified _KVPEIEVTV_ nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;ENSG00000263001|ENST00000573035|GTF2I 20.41453444215458 0.284085796332423 6 [EP]{I|L}EVKVTV 9 4 + 49.869 0.0 0.0 4.9249 4.9249 78.873 0.0 0.0 0.0 3.452205667976571 9.889917747712644 3.452205667976571 3.452205667976571 0 0.7742275032520141 0.0 0.3252574989159953 0.0 [EP]{I|L}EVKVTV;{[TV]|[{I|L}S]}[HM]VKVTV;[EP]{I|L}D{I|L}KVTV;{[QV]|[N{I|L}]|[RA]|[KV]}[EP]NKVTV;{NN|[MP]|[D{I|L}]|[EV]}[KP]NKVTV;{NN|[MP]|[D{I|L}]|[EV]}[EP]{I|L}KVTV;{[QV]|[N{I|L}]|[RA]|[KV]}[EP]{I|L}EVTV;{NN|[MP]|[D{I|L}]|[EV]}[KP]{I|L}EVTV;{[QV]|[N{I|L}]|[RA]|[KV]}[EP]GGKVTV;{NN|[MP]|[D{I|L}]|[EV]}[KP]GGKVTV 4.9249;4.584;4.0091;3.3917;3.3508;3.2274;3.0944;3.0535;2.4823;2.4415 -;-;-;-;-;-;+;-;-;- + 244 1 1.514 41699.2 1.0 2655 5469 8121 SUDHL4_400M_050219_2,8126 SUDHL4_400M_050219_2,8126,KVPEIEVTV False False KVPEIEVTV 43.660896 507.297351062298 2486047.0 8121.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 5.321341355641683 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8128 43.667 134.0 379240.0 25 0 65946.0 + 27449 PIVGALEL 8 76 406.2485091000349 810.4824652668699 2 406.2483093142509 MULTI CID FTMS 0 0 0 8127 382159.75 0.0917283824233077 10 -0.3345527648925781 1 Unmodified _PIVGALEL_ REV__chr7:44834562-44835643|14|15.29|0.2|6.28|-|2|H2AZ2,None|2 0.6903765706972694 0.8201419426409876 6 {I|L} 1 -1 10.485 0.0 0.0 1.2936 0.0 0.0 679.3874315528059 0.0 679.3874315528059 0.0 6.505149978319906 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2936 + + 8 + 1 1.514 47227.4 1.0 2656 5470 8127 SUDHL4_400M_050219_2,8128 SUDHL4_400M_050219_2,8128,PIVGALEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8129 43.671 202.0 242560.0 25 0 43432.0 + 38666 TTKVLGPL 8 69 414.7619608986876 827.5093688641753 2 414.7625610232353 MULTI CID FTMS 0 0 0 8127 197424.453125 0.1101685508861324 11 -0.3534317016601562 2 Unmodified _TTKVLGPL_ REV__ENSG00000181143|ENST00000397910|MUC16 2.577480529830294 0.808687252328423 6 {I|L} 1 -1 13.099 0.0 0.0 1.5829 0.0 0.0 696.4144572204237 0.0 696.4144572204237 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.5829 + + 12 + 1 1.514 44959.9 1.0 2657 5470 8127 SUDHL4_400M_050219_2,8129 SUDHL4_400M_050219_2,8129,TTKVLGPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8130 43.685 800.0 131450.0 25 0 6527.7 + 41029 VMFKEPVEV 9 152 539.2854066771331 0 539.2847778201103 PEAK CID FTMS 0 0 0 8127 96965.6953125 1.0 0 0.0 3 Unmodified _VMFKEPVEV_ ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000133243|Q9BX70-2|BTBD2 24.881564428377168 0.1568183054918469 6 VPVME 5 6 19.936 0.0 0.0 1.8518 0.0 0.0 246.123750309236 272.1406649225219 518.2644152317579 0.0 0.0 0.0 0.0 0 0.7302046884880938 0.0 0.6109243748081782 0.0 VPVME 1.8518 - 620 + 1 1.514 86930.9 0.4699999988079071 2658 5470 8127 SUDHL4_400M_050219_2,8130 SUDHL4_400M_050219_2,8130,VMFKEPVEV False True VMFKEPVEV 43.68516 539.28477782011 390846.28125 8127.0 ENST00000589685.2_1_19:1986489-1990887:-|nuORF;;nc|ENSG00000133243|Q9BX70-2|BTBD2;;ENSG00000133243|ENST00000255608|BTBD2 1.1474641958872478 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8133 43.695 165.0 437130.0 25 0 22462.0 -1 0 88 881.9106465213838 1761.8067401095675 2 881.9128295779228 MULTI CID FTMS 0 0 0 8132 315429.0 0.715357909358011 4 -0.0846366882324218 1 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQGA{I|L}S{M(Oxidation (M))|F}{I|L}Q 16 -1 + 87.285 0.0 0.0 4.9543 4.9543 83.04 0.0 0.0 0.0 7.659167939666318 12.068523895181372 7.659167939666318 8.699112850717938 0 0.9793036574208877 0.0 1.3494850021680094 0.7302046884880937 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQGA{I|L}S{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQQ{I|L}S{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}GGEAQGA{I|L}S{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEA[AG]GA{I|L}S{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PGG{I|L}NEAQGA{I|L}S{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQAG{I|L}S{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEHHA{I|L}SG{[QG]|[NA]}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}N[C(Carbamidomethyl (C))R]SAP[MT]{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEQQA{I|L}S{M(Oxidation (M))|F}{I|L}Q;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}PN{I|L}NEAQGYA[PS]{I|L}Q 4.9543;4.4605;4.4427;4.4427;4.4427;4.3997;4.3774;4.343;4.2217;4.1673 -;-;-;-;-;-;-;-;-;- 7026 + 1 1.514 51746.4 1.0 2659 5472 8132 SUDHL4_400M_050219_2,8133 SUDHL4_400M_050219_2,8133, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8134 43.705 586.0 182160.0 25 0 10816.0 + 41030 VMFKEPVEV 9 143 547.2834919205131 1092.5524309078262 2 547.2838012576103 MULTI CID FTMS 0 0 0 8132 115169.515625 0.6410440073420219 -4 0.0831184387207031 2 Oxidation (M) _VM(Oxidation (M))FKEPVEV_ ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000133243|Q9BX70-2|BTBD2 43.77239144664712 0.0547478964384323 6 V{M(Oxidation (M))|F}VPV{M(Oxidation (M))|F}{[WT]|[RM]}V 9 6 + 47.457 0.0 0.0 4.3437 4.3437 74.922 0.0 0.0 0.0 17.200936638974245 4.47625656106343 4.47625656106343 1.7828914987455846 0 0.9247425010840048 0.0 0.3807196863200844 0.0 V{M(Oxidation (M))|F}VPV{M(Oxidation (M))|F}{[WT]|[RM]}V;V{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{[SA]|[TG]}[VP]EV;V{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{[SA]|[TG]}[VP]D{I|L};V{M(Oxidation (M))|F}VPV{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}AV;V{M(Oxidation (M))|F}YP[SG]PVEV;V{M(Oxidation (M))|F}VP[W{M(Oxidation (M))|F}]W{I|L};V{M(Oxidation (M))|F}VPV{M(Oxidation (M))|F}{[ES]|[DT]|[{I|L}C]}G{I|L};V{M(Oxidation (M))|F}YP[SG]PVD{I|L};V{M(Oxidation (M))|F}V{M(Oxidation (M))|F}VP{[WT]|[RM]}V;V{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{M(Oxidation (M))|F}[HK]AV 4.3437;4.1805;3.7712;3.6314;3.6206;3.6053;3.2222;3.2113;3.1621;3.1621 -;-;-;-;-;-;-;-;-;- 1166 + 1 1.514 85279.8 1.0 2660 5472 8132 SUDHL4_400M_050219_2,8134 SUDHL4_400M_050219_2,8134,VMFKEPVEV True False VMFKEPVEV 43.705302 547.28380125761 1044918.8125 8132.0 ENST00000589685.2_1_19:1986489-1990887:-|nuORF;;nc|ENSG00000133243|Q9BX70-2|BTBD2;;ENSG00000133243|ENST00000255608|BTBD2 6.3934006690979 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8137 43.726 800.0 97702.0 25 0 7163.3 + 1460 ALFDAQAQV 9 130 481.7514513261072 961.4883497190144 2 481.7507812380791 MULTI CID FTMS 0 0 0 8136 52542.8671875 0.6248923474395159 1 -0.0423622131347656 1 Unmodified _ALFDAQAQV_ ENSG00000105397|ENST00000525621|TYK2 30.63653989081413 0.1413794767160703 6 [{I|L}A]D{M(Oxidation (M))|F}AQA{[QV]|[N{I|L}]|[RA]|[KV]} 9 2 + 38.782 0.0 0.0 4.0335 4.0335 72.031 0.0 0.0 0.0 0.6022515652353349 7.147642715192511 0.6022515652353349 0.6022515652353349 0 0.0 2.0 0.3252574989159953 0.0 [{I|L}A]D{M(Oxidation (M))|F}AQA{[QV]|[N{I|L}]|[RA]|[KV]};[AG]ADA{M(Oxidation (M))|F}{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};[QA]DA{M(Oxidation (M))|F}{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};[AG]AD{M(Oxidation (M))|F}A{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};[AG]AAD{M(Oxidation (M))|F}{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A]D{M(Oxidation (M))|F}A[AG]A{[QV]|[N{I|L}]|[RA]|[KV]};[QA]D{M(Oxidation (M))|F}A{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};[{I|L}A][W{M(Oxidation (M))|F}]QA{[QV]|[N{I|L}]|[RA]|[KV]};{[CP]|[EA]}NA{M(Oxidation (M))|F}{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]};[QA]AD{M(Oxidation (M))|F}{I|L}A{[QV]|[N{I|L}]|[RA]|[KV]} 4.0335;3.9709;3.483;3.2439;3.092;3.0758;2.7561;2.69;2.6737;2.6041 -;-;-;-;-;-;-;-;-;- 546 1 1.514 62776.1 0.4300000071525574 2661 5474 8136 SUDHL4_400M_050219_2,8137 SUDHL4_400M_050219_2,8137,ALFDAQAQV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8138 43.738 701.0 199750.0 25 0 13854.0 + 24635 MLPPPPLTA 9 137 476.7621932703769 951.5098336075538 2 476.7623779177666 MULTI CID FTMS 0 0 0 8136 158533.984375 0.638593278673058 -2 0.0201492309570312 2 Oxidation (M) _M(Oxidation (M))LPPPPLTA_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 136.0806070426287 0.0151576307317044 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPPP{I|L}TA 9 0 + 64.509 0.0 0.0 6.7797 6.7797 93.748 0.0 0.0 0.0 7.788498652755273 7.788498652755273 7.788498652755273 19.70858380022448 0 2.353917193908117 1.6989700043360187 2.0114393726401687 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPPP{I|L}TA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPPVSPV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[YK]P{I|L}TA;[{I|L}P]{M(Oxidation (M))|F}PPP{I|L}TA;[{I|L}P]P{M(Oxidation (M))|F}PP{I|L}TA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}]{M(Oxidation (M))|F}{I|L}TA;[{I|L}P]PP{M(Oxidation (M))|F}P{I|L}TA;[{I|L}P]PPP{M(Oxidation (M))|F}{I|L}TA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[YK]{I|L}TA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[K{I|L}]TA{M(Oxidation (M))|F}{I|L} 6.7797;4.7084;4.2021;4.183;4.0008;3.7509;3.6798;3.6751;3.6168;3.6156 +;-;-;-;-;-;-;-;-;- + 906 + 1 1.514 111743.5 1.0 2662 5474 8136 SUDHL4_400M_050219_2,8138 SUDHL4_400M_050219_2,8138,MLPPPPLTA True False MLPPPPLTA 43.737895 476.762377917767 4598193.0 8136.0 nc|ENSG00000105486|P18858-2|LIG1;;ENSG00000105486|ENST00000263274|LIG1;;nc|ENSG00000105486|P18858-3|LIG1 7.713749249776204 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8139 43.752 800.0 94358.0 25 0 7220.1 + 1461 ALFDAQAQV 9 88 962.493188405962 961.4859119393618 1 962.4954711794852 MULTI CID FTMS 0 0 0 8136 95688.765625 1.0 0 0.0 3 Unmodified _ALFDAQAQV_ ENSG00000105397|ENST00000525621|TYK2 99.7552728972412 0.0110101799492648 6 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}AAGAAQV 10 4 + 83.926 0.0 0.0 8.7288 8.7288 84.702 0.0 0.0 0.0 1.8613664413781803 13.322646798160562 1.8613664413781803 1.1357666116517606 0 1.6549471895720984 0.0 1.520021379835142 1.5044321917401078 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}AAGAAQV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}AAQAQV;{[{M(Oxidation (M))|F}D]|MM}{I|L}AAQAQV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}AAAGAQV;{[{M(Oxidation (M))|F}D]|MM}A{I|L}AQAQV;[QA]DA{M(Oxidation (M))|F}{I|L}AQV;[QA]AD{M(Oxidation (M))|F}{I|L}AQV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}AAGAA[AG]V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}AAQA[AG]V;[QA]D{M(Oxidation (M))|F}A{I|L}AQV 8.7288;8.6107;8.5352;8.2976;8.2825;8.0918;7.8391;7.7757;7.653;7.5956 -;-;-;-;-;-;-;-;-;- 5637 1 1.514 56588.0 0.4799999892711639 2663 5474 8136 SUDHL4_400M_050219_2,8139 SUDHL4_400M_050219_2,8139,ALFDAQAQV True True ALFDAQAQV 43.751743 962.495471179485 529688.9375 8136.0 ENSG00000105397|ENST00000525621|TYK2 7.9043660163879395 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8141 43.757 74.0 577210.0 25 0 87207.0 + 16931 KILEDVVGV 9 64 486.2925146247919 970.5704763163836 2 486.2922241091728 MULTI CID FTMS 0 0 0 8140 620898.375 0.6193448645344773 1 -0.022125244140625 1 Unmodified _KILEDVVGV_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 22.736283301280096 0.2418982879461534 6 VAVVR 5 7 40.433 0.0 0.0 4.1659 0.0 0.0 428.225877830275 0.0 428.225877830275 0.0 24.49092531119419 0.0 0.0 0 1.0 0.0 0.0 0.0 VAVVR 4.1659 - 118 1 1.514 38179.1 1.0 2664 5475 8140 SUDHL4_400M_050219_2,8141 SUDHL4_400M_050219_2,8141,KILEDVVGV False True KILEDVVGV 43.75732 486.292224109173 4294401.5 8140.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 5.439894994099935 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8142 43.759 91.0 666440.0 25 0 84503.0 + + 33643 SISLQITQV 9 100 495.2980438496338 988.5815347660676 2 495.2985107302666 MULTI CID FTMS 0 0 0 8140 372111.96875 0.4486531156221979 6 -0.2625885009765625 2 Unmodified _SISGTVISLL_ ENST00000605233.2_1_12:89919492-89933896:+|nuORF 74.92900055777586 0.0187778523875693 6 {[TV]|[{I|L}S]}SGTV{I|L}S{I|L}{I|L} 10 -1 + 75.007 0.0 0.0 7.5873 7.5873 85.606 0.0 0.0 0.0 20.79181246047625 56.56325176949954 20.79181246047625 2.6979531151190628 0 1.1549471895720984 2.0 1.9634679910804405 0.0 {[TV]|[{I|L}S]}SGTV{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}SGTVTV{I|L}{I|L};{[TV]|[{I|L}S]}S{I|L}[SG]{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}S{I|L}[SG]TV{I|L}{I|L};{[TV]|[{I|L}S]}E[KS]{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}E[KS]TV{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}T[KS]{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}S[KT]EV{I|L}{I|L};{[WT]|[RM]}GTV{I|L}S{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}T[KS]TV{I|L}{I|L} 7.5873;7.3144;6.4153;6.1424;5.5765;5.3036;4.708;4.6931;4.4493;4.435 +;-;-;-;-;-;-;-;-;- + 767 1 1.514 50779.4 1.0 2665 5475 8140 SUDHL4_400M_050219_2,8142 SUDHL4_400M_050219_2,8142,SISGTVISLL False False SISLQITQV 43.75932 495.298510730267 2675170.5 8140.0 ENST00000605233.2_1_12:89919492-89933896:+|nuORF 2.4457286596298218 2.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8143 43.761 100.0 524260.0 25 0 92713.0 + -1 VRKVQFPIM 9 78 567.3296542590296 1132.644755584859 2 567.3300048708916 MULTI CID FTMS 0 0 0 8140 460678.875 0.8318318474212842 -1 0.0423622131347656 3 Oxidation (M) _VRKVQFPIM(Oxidation (M))_ REV__ENST00000509330.5_1_6:64394512-64394560:+|nuORF 5.230669730166228 0.7320841359114558 6 W 1 -1 6.9897 0.0 0.0 0.61711 0.0 0.0 660.4124286009654 283.1195467584594 943.5319753594248 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.61711 - 16 + 1 1.514 43003.4 1.0 2666 5475 8140 SUDHL4_400M_050219_2,8143 SUDHL4_400M_050219_2,8143,VRKVQFPIM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8144 43.766 239.0 307170.0 25 0 33776.0 + 41121 FAYDGKDYL 9 109 546.255693944196 1090.4968349551918 2 546.2559081912041 MULTI CID FTMS 0 0 0 8140 179006.03125 0.9842851320217304 -1 0.0423622131347656 4 Unmodified _VNSYFDSFL_ ENSG00000204592|ENST00000376630|HLA-E 15.847184025352805 0.4077185912009129 6 [KG]DYDA 6 7 28.064 0.0 0.0 2.5735 0.0 0.0 0.0 438.2030476839606 438.2030476839606 10.629325833262726 0.0 0.0 0.0 0 0.0 0.0 1.2614393726401687 0.0 [KG]DYDA 2.5735 - 199 1 1.514 60888.0 1.0 2667 5475 8140 SUDHL4_400M_050219_2,8144 SUDHL4_400M_050219_2,8144,VNSYFDSFL False False FAYDGKDYL 43.76596 546.255908191204 1104313.75 8140.0 ENSG00000204592|ENST00000376630|HLA-E 0.8332902590433756 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8145 43.771 298.0 168160.0 25 0 13671.0 + 40969 VLYCIHKR 8 101 516.2962701045436 1030.5779872758872 2 516.2984496951103 MULTI CID FTMS 0 0 0 8140 102547.5859375 0.2028247892141844 22 -0.9060401916503906 5 Unmodified _VLYCIHKR_ REV__HERVFH21-int_dup68|chrX:64848898-64850686:+|1.1618635505066113|0.1868304972504996|2.64|46.0|41|3|sense 9.347437153973935 0.7675937258251505 6 [TA]WQ 4 -1 23.755 0.0 0.0 2.305 0.0 0.0 0.0 541.3098848932249 541.3098848932249 11.615010663094232 0.0 0.0 0.0 0 0.0 0.4814860601221125 0.0 0.4247425010840047 [TA]WQ 2.305 - 151 + 1 1.514 46632.5 1.0 2668 5475 8140 SUDHL4_400M_050219_2,8145 SUDHL4_400M_050219_2,8145,VLYCIHKR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8146 43.774 117.0 593560.0 25 0 58246.0 980 AFQRQLTA 8 87 467.75685377416704 933.499154615134 2 467.7570678591728 MULTI CID FTMS 0 0 0 8140 306797.28125 0.6207424506152376 -1 0.0423622131347656 6 Unmodified _AFQRQLTA_ ENSG00000105851|ENST00000496166|PIK3CG 20.453626601364224 0.6087503291685402 6 PPPP{I|L}TA 7 5 50.789 0.0 0.0 5.4407 0.0 0.0 242.1089649884781 0.0 242.1089649884781 0.0 37.2944167232194 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 PPPP{I|L}TA 5.4407 - 134 1 1.514 57578.9 1.0 2669 5475 8140 SUDHL4_400M_050219_2,8146 SUDHL4_400M_050219_2,8146,AFQRQLTA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8148 43.781 276.0 200680.0 25 0 26147.0 -1 VTPVMNPLI 9 92 500.2829222482266 998.5512915632534 2 500.2838622927666 MULTI CID FTMS 0 0 0 8147 142047.171875 0.1931950229019884 27 -1.164936065673828 1 Oxidation (M) _VTPVM(Oxidation (M))NPLI_ nc|ENSG00000203581|Q96R84|OR1F2P 7.910154910731844 0.6385446671287552 6 {I|L} 1 -1 11.783 0.0 0.0 1.18 0.0 0.0 867.4563951782909 0.0 867.4563951782909 0.0 9.018526774280158 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.18 + + 23 + 1 1.514 48365.3 1.0 2670 5476 8147 SUDHL4_400M_050219_2,8148 SUDHL4_400M_050219_2,8148,VTPVMNPLI False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 8149 43.795 800.0 101360.0 25 0 11864.0 -1 0 80 964.4441837716624 2890.310721915187 3 964.7820922732352 MULTI CID FTMS 0 0 0 8147 116842.375 0.0860587113754337 -5 0.0887031555175781 2 6 [NP]{I|L}NWQ[VG]DH 10 -1 12.573 0.0 0.0 0.43501 0.0 0.0 0.0 1726.7551636271446 1726.7551636271446 5.583362792011997 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [NP]{I|L}NWQ[VG]DH 0.43501 - 350 1 1.514 64165.0 0.4600000083446502 2671 5476 8147 SUDHL4_400M_050219_2,8149 SUDHL4_400M_050219_2,8149, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8150 43.8 272.0 200310.0 25 0 21442.0 + 12282 RTIEYLEEV 9 88 575.8427657225853 1149.6709785119706 2 575.8433105349541 MULTI CID FTMS 0 0 0 8147 196209.3125 0.871586166697241 -1 0.022125244140625 3 Unmodified _GRRAPLRPEV_ ENSG00000084754|ENST00000380649|HADHA 6.2057823575117 0.6979311171683138 6 EE[K{I|L}]Y{I|L}EE 8 8 28.082 0.0 0.0 2.4426 0.0 0.0 0.0 113.1460037439746 113.1460037439746 15.607887415777531 0.0 0.0 0.0 0 0.0 1.0457574905606752 0.0 0.0 EE[K{I|L}]Y{I|L}EE 2.4426 - 114 1 1.514 46598.7 1.0 2672 5476 8147 SUDHL4_400M_050219_2,8150 SUDHL4_400M_050219_2,8150,GRRAPLRPEV False False RTIEYLEEV 43.80037 575.843310534954 2327514.75 8147.0 ENSG00000084754|ENST00000380649|HADHA 2.3918230533599854 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8151 43.811 621.0 216480.0 25 0 32629.0 + 34443 SLYDYNPNL 9 132 549.7588660266049 1097.5031791200097 2 549.7592651247978 MULTI CID FTMS 0 0 0 8147 114138.75 0.2372862350478793 -2 0.0644874572753906 4 Unmodified _SLYDYNPNL_ ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL;ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C 78.14939416004806 0.0179651292570206 6 {[TV]|[{I|L}S]}YDYN 6 3 52.101 0.0 0.0 4.7472 0.0 0.0 0.0 339.1651126809372 339.1651126809372 8.25650085374724 0.0 0.0 0.0 0 0.8807196863200843 2.0 1.0897803053245954 0.0 + {[TV]|[{I|L}S]}YDYN 4.7472 + + 909 1 1.514 107780.7 1.0 2673 5476 8147 SUDHL4_400M_050219_2,8151 SUDHL4_400M_050219_2,8151,SLYDYNPNL True True SLYDYNPNL 43.81122 549.7597 2431449.75 8147.0 ENST00000565932.5_1_16:28734455-28746831:+|nuORF;;nc|ENSG00000184110|Q99613-2|EIF3C;;ENSG00000205609|ENST00000380876|EIF3CL;;ENSG00000184110|ENST00000331666|EIF3C 6.799717744191487 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8152 43.818 376.0 185410.0 25 0 12566.0 -1 LILMLCSSA 9 90 512.2653431168934 1022.5161333005868 2 512.2653686404228 MULTI CID FTMS 0 0 0 8147 96274.8359375 0.304999015443918 -3 0.0685539245605468 5 Carbamidomethyl (C),Oxidation (M) _LILM(Oxidation (M))LC(Carbamidomethyl (C))SSA_ ENST00000587250.3_1_17:41178007-41180165:+|nuORF 24.67388899826682 0.2172451872415813 6 {I|L}{I|L}[QP]P{I|L}S 7 -1 26.471 0.0 0.0 2.5888 0.0 0.0 0.0 271.03372742116875 271.03372742116875 1.9757601677798675 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.5 0.0 {I|L}{I|L}[QP]P{I|L}S 2.5888 - 108 1 1.514 58987.2 1.0 2674 5476 8147 SUDHL4_400M_050219_2,8152 SUDHL4_400M_050219_2,8152,LILMLCSSA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8154 43.824 121.0 477810.0 25 0 93131.0 + 40362 VHRRELHV 8 74 523.3035751559308 1044.5925973786616 2 523.3037597537041 MULTI CID FTMS 0 0 0 8153 389931.1875 0.3322408455488005 25 -1.0789260864257812 1 Unmodified _VHRRELHV_ REV__ENST00000436105.1_1_7:43549553-43549670:-|nuORF 0.7936320650641473 0.8195151834710337 6 {M(Oxidation (M))|F} 1 -1 11.259 0.0 0.0 1.0778 0.0 0.0 879.5132344409648 0.0 879.5132344409648 0.0 0.2899597348884342 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0778 - 7 + 1 1.514 48660.3 1.0 2675 5477 8153 SUDHL4_400M_050219_2,8154 SUDHL4_400M_050219_2,8154,VHRRELHV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8155 43.829 254.0 254650.0 25 0 17047.0 + 26195 NQFPGFKEV 9 101 533.271836850181 1064.529120767162 2 533.2720825076103 MULTI CID FTMS 0 0 0 8153 229228.421875 0.0704110995770405 19 -0.7989768981933594 2 Unmodified _NQFPGFKEV_ ENSG00000077312|ENST00000243563|SNRPA;ENSG00000125870|ENST00000246071|SNRPB2;ENST00000407763.2_1_6:149433147-149433330:-|nuORF 26.268140514670165 0.1969607489560049 6 GGQ{M(Oxidation (M))|F} 4 8 31.653 0.0 0.0 2.9734 0.0 0.0 0.0 672.3358757452789 672.3358757452789 8.949982598385041 0.0 0.0 0.0 0 1.0 1.0457574905606752 0.0 0.7302046884880937 GGQ{M(Oxidation (M))|F} 2.9734 - 132 1 1.514 54342.2 1.0 2676 5477 8153 SUDHL4_400M_050219_2,8155 SUDHL4_400M_050219_2,8155,NQFPGFKEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8156 43.832 142.0 361430.0 25 0 62969.0 8987 FASQVQAIIL 10 76 545.3165147194395 1088.618476505679 2 545.3166992068291 MULTI CID FTMS 0 0 0 8153 315913.46875 0.2494994329934716 -7 0.1571044921875 3 Unmodified _FASQVQAIIL_ ENST00000379477.5_1_13:41835952-41837434:-|nuORF;ENST00000498245.1_1_13:41835952-41837531:-|nuORF 3.5964929083625545 0.7100006075494749 6 V 1 9 9.2694 0.0 0.0 0.85148 0.0 0.0 971.5392737852673 0.0 971.5392737852673 0.0 4.665266051846935 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.85148 + + 7 + 1 1.514 47799.9 1.0 2677 5477 8153 SUDHL4_400M_050219_2,8156 SUDHL4_400M_050219_2,8156,FASQVQAIIL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8157 43.835 134.0 442180.0 25 0 35764.0 + 40433 VIINQIYEA 9 82 531.7954860765346 0 531.7953979372978 PEAK CID FTMS 0 0 0 8153 287419.375 0.4768720612292979 -2 0.0662612915039062 4 Unmodified _VIINQIYEA_ ENSG00000072818|ENST00000158762|ACAP1;ENST00000570439.1_1_17:7251430-7251541:+|nuORF;ENST00000576594.1_1_17:7251274-7251541:+|nuORF 44.40701690623563 0.0469661192146891 6 {I|L}V{I|L}Q 4 7 32.643 0.0 0.0 3.0749 0.0 0.0 381.1533367997504 224.1046541803344 605.2579909800849 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 1.5114393726401687 {I|L}V{I|L}Q 3.0749 - 71 + 1 1.514 50227.9 1.0 2678 5477 8153 SUDHL4_400M_050219_2,8157 SUDHL4_400M_050219_2,8157,VIINQIYEA True True VIINQIYEA 43.834711 531.795397937298 2985066.75 8153.0 ENST00000576594.1_1_17:7251274-7251541:+|nuORF;;ENST00000570439.1_1_17:7251430-7251541:+|nuORF;;ENSG00000072818|ENST00000158762|ACAP1 4.854908148447673 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8158 43.839 239.0 324290.0 25 0 35408.0 + 44131 YLDLSENRL 9 84 561.7929193315273 1121.5712857298545 2 561.7929565310478 MULTI CID FTMS 0 0 0 8153 165579.46875 0.7215078049462339 -1 0.0441360473632812 5 Unmodified _YLDLSENRL_ ENSG00000177731|ENST00000327031|FLII;ENST00000478416.1_1_17:18157237-18162004:-|nuORF;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENST00000584444.5_1_17:18156710-18162004:-|nuORF;nc|ENSG00000177731|Q13045-3|FLII 43.77239144664712 0.0547478964384323 6 Y{I|L}D{I|L}SE[RN]{I|L} 9 0 + 76.49 0.0 0.0 6.8199 6.8199 87.16 0.0 0.0 0.0 60.17915750013603 5.872697724344135 5.872697724344135 6.276362525516532 0 0.9247425010840048 2.0 0.3807196863200844 0.7742275032520141 + + Y{I|L}D{I|L}SE[RN]{I|L};Y{I|L}{I|L}DSE[RN]{I|L};Y{I|L}D{I|L}G{[MS]|[{M(Oxidation (M))|F}A]}[NP]{I|L};Y{I|L}{I|L}DG{[MS]|[{M(Oxidation (M))|F}A]}[NP]{I|L};Y{I|L}D{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[NP]{I|L};Y{I|L}{I|L}D{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[NP]{I|L};[Y{I|L}]{[{M(Oxidation (M))|F}H]|[RQ]}G[NP]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]};[RH][NP]SE[RN]{I|L} 6.8199;6.2603;6.1331;5.5735;5.5303;4.9707;2.6402;0.68721 +;-;-;-;-;-;-;- + 171 + 1 1.514 63317.4 1.0 2679 5477 8153 SUDHL4_400M_050219_2,8158 SUDHL4_400M_050219_2,8158,YLDLSENRL True True YLDLSENRL 43.839192 561.792956531048 1214764.5 8153.0 ENST00000584444.5_1_17:18156710-18162004:-|nuORF;;nc|ENSG00000177731|Q13045-3|FLII;;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;ENST00000478416.1_1_17:18157237-18162004:-|nuORF 5.071328639984131 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8159 43.847 412.0 203830.0 25 0 16033.0 + 2264 AQFPNGPQF 9 114 503.2429419404651 1004.4713309477302 2 503.2429992556572 MULTI CID FTMS 0 0 0 8153 135011.8125 0.70610391403937 4 -0.1963272094726562 6 Unmodified _AQFPNGPQF_ ENSG00000134375|ENST00000367287|TIMM17A;ENST00000482943.1_1_1:201932715-201938679:+|nuORF 54.773552608820026 0.0299037012502309 6 [QA]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 4 5 27.55 0.0 0.0 2.7427 0.0 0.0 0.0 508.2213058835302 508.2213058835302 13.769824979768105 0.0 0.0 0.0 0 0.5 0.6575773191777937 0.0 0.7302046884880937 [QA]{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.7427 - 255 1 1.514 68028.7 1.0 2680 5477 8153 SUDHL4_400M_050219_2,8159 SUDHL4_400M_050219_2,8159,AQFPNGPQF True True AQFPNGPQF 43.846564 503.242999255657 3833937.5 8153.0 ENSG00000134375|ENST00000367287|TIMM17A;;ENST00000482943.1_1_1:201932715-201938679:+|nuORF 8.215217272440592 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8160 43.86 800.0 168070.0 25 0 23378.0 + 44253 YLKLLTRAE 9 153 553.830663241412 1105.646773549624 2 553.8308593630791 MULTI CID FTMS 0 0 0 8153 125232.2734375 0.2486119990260077 -7 0.1571044921875 7 Unmodified _YLKLLTRAE_ REV__ENSG00000099957|ENST00000413302|P2RX6;REV__ENST00000487342.1_1_22:21377642-21380401:+|nuORF;REV__nc|ENSG00000099957|O15547-2|P2RX6 4.3292370932331545 0.7635526921153418 6 [Y{I|L}]NYK 5 -1 20.458 0.0 0.0 1.8503 0.0 0.0 0.0 421.2803189856891 421.2803189856891 9.861642867010705 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 [Y{I|L}]NYK 1.8503 - 159 1 1.514 104492.0 0.5699999928474426 2681 5477 8153 SUDHL4_400M_050219_2,8160 SUDHL4_400M_050219_2,8160,YLKLLTRAE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8161 43.874 800.0 256870.0 25 0 43115.0 + 14899 ILLENFSAEK 10 124 582.3192438801369 1162.6239348270738 2 582.3196899294853 MULTI CID FTMS 0 0 0 8153 104095.828125 0.1341436222243073 -2 0.0662612915039062 8 Unmodified _ILLENFSAEK_ ENST00000560979.1_1_15:49715501-49715549:+|nuORF 81.9152076656658 0.0154982280583276 6 {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK 10 0 + 121.36 0.0 0.0 10.438 10.438 93.61 0.0 0.0 0.0 62.05047337746616 16.361660483388036 16.361660483388036 9.164539485499247 0 1.1307196863200843 2.0 1.4436726795685342 0.9517188504113846 + + {I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SAEK;{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}SA[SG]{I|L};{I|L}{I|L}{I|L}EN{M(Oxidation (M))|F}S{[QS]|[NT]}{I|L};{I|L}{I|L}{I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}SAEK;{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}S{[QS]|[NT]}{I|L};{I|L}{I|L}{I|L}EGG{M(Oxidation (M))|F}SA[SG]{I|L};{I|L}{I|L}{I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}SA[SG]{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{NN|[MP]|[D{I|L}]|[EV]}SAEK;{I|L}{I|L}{I|L}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}S{[QS]|[NT]}{I|L} 10.438;9.6498;8.6826;8.3865;7.9175;7.5982;7.2693;6.1619;6.1494;5.8658 +;-;-;-;-;-;-;-;-;- + 1554 + 1 1.514 152123.5 0.5199999809265137 2682 5477 8153 SUDHL4_400M_050219_2,8161 SUDHL4_400M_050219_2,8161,ILLENFSAEK True True ILLENFSAEK 43.874226 582.319689929485 3610728.25 8153.0 ENST00000560979.1_1_15:49715501-49715549:+|nuORF 6.306604385375977 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8162 43.888 800.0 110260.0 25 0 7125.4 + 27976 KLNVAPLAV 9 108 462.7975356876896 923.5805184421793 2 462.7978088259697 MULTI CID FTMS 0 0 0 8153 94819.2734375 1.0 0 0.0 9 Unmodified _PLWLLLAV_ ENSG00000152082|ENST00000281871|MZT2B;ENST00000480182.1_1_2:130940128-130948196:+|nuORF;ENSG00000173272|ENST00000309451|MZT2A;ENST00000485869.1_1_2:130940017-130940434:+|nuORF 24.20995872069341 0.5349487244130675 6 AV 2 6 30.969 0.0 0.0 3.3532 0.0 0.0 735.4640156119043 0.0 735.4640156119043 0.0 13.010299956639813 0.0 0.0 0 1.0 0.0 0.0 0.0 + AV 3.3532 + + 174 + 1 1.514 70084.9 0.4300000071525574 2683 5477 8153 SUDHL4_400M_050219_2,8162 SUDHL4_400M_050219_2,8162,PLWLLLAV False False KLNVAPLAV 43.88804 462.79780882597 528124.5625 8153.0 ENSG00000152082|ENST00000281871|MZT2B;;ENST00000480182.1_1_2:130940128-130948196:+|nuORF;;ENSG00000173272|ENST00000309451|MZT2A;;ENST00000485869.1_1_2:130940017-130940434:+|nuORF 1.5617707173029582 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8164 43.893 104.0 520940.0 25 0 36246.0 -1 0 67 865.8982197439032 1729.7818865546062 2 865.8996459841728 MULTI CID FTMS 0 0 0 8163 458521.90625 0.3379086929214459 2 -0.1074028015136718 1 6 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 49.43 0.0 0.0 2.8576 0.0 0.0 844.4195527679509 0.0 844.4195527679509 0.0 27.289784572998173 0.0 0.0 0 0.5 0.0 0.0 0.805462187404089 DAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 2.8576 - 273 1 1.514 42633.0 1.0 2684 5478 8163 SUDHL4_400M_050219_2,8164 SUDHL4_400M_050219_2,8164, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8165 43.907 800.0 126290.0 25 0 13162.0 + + 1217 ALGPIREL 8 108 434.76630916151953 867.5180653898391 2 434.7664062380791 MULTI CID FTMS 0 0 0 8163 58464.46875 0.6217927221326892 1 -0.0577468872070312 2 Unmodified _AIGLPWLV_ nc|ENSG00000021574|Q9UBP0-3|SPAST;ENSG00000021574|ENST00000315285|SPAST;nc|ENSG00000021574|Q9UBP0-2|SPAST;nc|ENSG00000021574|Q9UBP0-4|SPAST 17.086550045450526 0.6584923310065985 6 [{I|L}A]GP{I|L} 5 -1 46.037 0.0 0.0 5.3067 0.0 0.0 0.0 413.2129305475219 413.2129305475219 36.121763069364434 0.0 0.0 0.0 0 0.6203715150305281 2.0 0.0 0.0 [{I|L}A]GP{I|L} 5.3067 - 91 + 1 1.514 83237.9 0.4099999964237213 2685 5478 8163 SUDHL4_400M_050219_2,8165 SUDHL4_400M_050219_2,8165,AIGLPWLV False False ALGPIREL 43.906665 434.766406238079 426102.8125 8163.0 nc|ENSG00000021574|Q9UBP0-3|SPAST;;ENSG00000021574|ENST00000315285|SPAST;;nc|ENSG00000021574|Q9UBP0-2|SPAST;;nc|ENSG00000021574|Q9UBP0-4|SPAST 0.3712349484364192 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8166 43.914 390.0 151970.0 25 0 11230.0 + 19058 LDPVLYRIS 9 109 538.3088172384545 1074.6030815437089 2 538.3094970583916 MULTI CID FTMS 0 0 0 8163 139469.328125 0.2746807272909896 -5 0.1827354431152343 3 Unmodified _LDPVLYRIS_ REV__ENSG00000173614|ENST00000377205|NMNAT1 7.289230182591677 0.6602208344931196 6 {M(Oxidation (M))|F} 1 -1 11.42 0.0 0.0 1.0627 0.0 0.0 909.5235660181214 0.0 909.5235660181214 0.0 1.1423966425768484 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0627 - 96 + 1 1.514 51901.9 1.0 2686 5478 8163 SUDHL4_400M_050219_2,8166 SUDHL4_400M_050219_2,8166,LDPVLYRIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8167 43.918 237.0 242120.0 25 0 15764.0 + -1 TMAPPVMAY 9 102 506.7270110912109 1011.4394692492216 2 506.7269775271416 MULTI CID FTMS 0 0 0 8163 133167.390625 0.7023679902583232 1 -0.0577468872070312 4 2 Oxidation (M) _TM(Oxidation (M))APPVM(Oxidation (M))AY_ nc|ENSG00000073921|Q13492-5|PICALM;ENSG00000073921|ENST00000393346|PICALM;nc|ENSG00000073921|Q13492-4|PICALM 26.88365393820708 0.1891292719743517 6 [{M(Oxidation (M))|F}V]QHT{M(Oxidation (M))|F}AY 8 -1 + 38.836 0.0 0.0 3.8397 3.8397 82.089 0.0 0.0 0.0 7.601810738412027 5.950528104279016 5.950528104279016 9.262137858390812 0 1.024227503252014 1.5228787452803376 0.0 0.0 [{M(Oxidation (M))|F}V]QHT{M(Oxidation (M))|F}AY;[{M(Oxidation (M))|F}V][AG]HT{M(Oxidation (M))|F}AY;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}HT{M(Oxidation (M))|F}AY;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}HT{M(Oxidation (M))|F}AY;{[MS]|[{M(Oxidation (M))|F}A]}T{[HG]|PP}V{M(Oxidation (M))|F}AY;[{M(Oxidation (M))|F}T]A{[HG]|PP}V{M(Oxidation (M))|F}AY;[EP]{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}AY;[EP]{[RE]|[WV]}T{M(Oxidation (M))|F}AY;{[QN]|[E{I|L}]|[KN]}P{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}AY;[EP]{I|L}{[CA]|SS}V{M(Oxidation (M))|F}AY 3.8397;2.9239;2.8619;2.0364;1.7985;1.0701;0.99713;0.90131;0.90131;0.86827 -;-;-;-;-;+;-;-;-;- + 326 1 1.514 48793.0 1.0 2687 5478 8163 SUDHL4_400M_050219_2,8167 SUDHL4_400M_050219_2,8167,TMAPPVMAY False False TMAPPVMAY 43.918096 506.726977527142 879875.6875 8163.0 nc|ENSG00000073921|Q13492-5|PICALM;;ENSG00000073921|ENST00000393346|PICALM;;nc|ENSG00000073921|Q13492-4|PICALM 4.879568497339885 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8168 43.932 800.0 286000.0 25 0 34805.0 -1 0 161 958.7759395913516 2873.3059893742548 3 959.4440795779228 MULTI CID FTMS 0 0 0 8163 169597.578125 0.3306922120786641 -5 0.1827354431152343 5 6 DG{M(Oxidation (M))|F}{I|L}QHP{[RE]|[WV]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}SAD{[QD]|[EN]|[WG]|[KD]|[RS]} 17 -1 76.326 0.0 0.0 2.6564 0.0 0.0 908.4461169777798 0.0 908.4461169777798 0.0 14.7714689506046 0.0 0.0 0 0.3182503180159344 0.0 2.079689690656103 1.110924374808178 DG{M(Oxidation (M))|F}{I|L}QHP{[RE]|[WV]}G{M(Oxidation (M))|F}{M(Oxidation (M))|F}SAD{[QD]|[EN]|[WG]|[KD]|[RS]} 2.6564 - 28334 1 1.514 152747.3 0.6200000047683716 2688 5478 8163 SUDHL4_400M_050219_2,8168 SUDHL4_400M_050219_2,8168, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8169 43.946 800.0 113370.0 25 0 7377.5 -1 0 94 979.1194113099594 2934.336404530078 3 979.7899047732352 MULTI CID FTMS 0 0 0 8163 96385.0859375 0.3796362876588652 -2 0.1141815185546875 6 6 S{[QS]|[NT]} 3 -1 13.587 0.0 0.0 0.46304 0.0 0.0 2614.2036358306627 0.0 2614.2036358306627 0.0 3.409817168486935 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.3252574989159953 S{[QS]|[NT]} 0.46304 - 645 + 1 1.514 72722.6 0.4699999988079071 2689 5478 8163 SUDHL4_400M_050219_2,8169 SUDHL4_400M_050219_2,8169, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8171 43.959 553.0 142530.0 25 0 11837.0 + 29074 QELKLITVQ 9 126 536.3240457674104 1070.6335386016208 2 536.3238403201103 MULTI CID FTMS 0 0 0 8170 88268.40625 0.0861401260055082 3 -0.1088523864746093 1 Unmodified _QELKLITVQ_ REV__ENSG00000139668|ENST00000298125|WDFY2 39.21299971606389 0.0797768173001226 6 [AG]E{I|L}{I|L}K{I|L}TQV 10 -1 + 43.718 0.0 0.0 4.0834 4.0834 54.439 0.0 0.0 0.0 3.5588685201699164 7.314309196763702 3.5588685201699164 0.0 0 0.5484550065040281 1.5228787452803376 1.110924374808178 0.0 [AG]E{I|L}{I|L}K{I|L}TQV;[AG]E{I|L}K{I|L}{I|L}TQV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}K{I|L}{I|L}TQV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}K{I|L}TQV;{NN|[MP]|[D{I|L}]|[EV]}AAK{I|L}{I|L}TQV;{NN|[MP]|[D{I|L}]|[EV]}AA{I|L}K{I|L}TQV;[VP]{[CA]|SS}{I|L}K{I|L}TQV;[VP]{[CA]|SS}K{I|L}{I|L}TQV;[VS][PS]{I|L}K{I|L}TQV;[VS][PS]K{I|L}{I|L}TQV 4.0834;4.0834;3.751;3.751;3.5825;3.5825;3.0004;3.0004;2.359;2.359 -;-;-;-;-;-;-;-;-;- 412 1 1.514 67386.3 1.0 2690 5479 8170 SUDHL4_400M_050219_2,8171 SUDHL4_400M_050219_2,8171,QELKLITVQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8172 43.973 800.0 133960.0 25 0 11421.0 -1 RIMDPDVITGY 11 81 648.3182649032743 1294.6219768733486 2 648.3181640505791 MULTI CID FTMS 0 0 0 8170 112346.0234375 0.516466508219768 -2 0.1277923583984375 2 Oxidation (M) _RIM(Oxidation (M))DPDVITGY_ ENSG00000062822|ENST00000440232|POLD1 28.23362336080872 0.4292685378469897 6 [{I|L}T][WM]DPV{I|L}TGY 11 -1 + 66.942 0.0 0.0 5.1708 5.1708 78.728 0.0 0.0 0.0 2.7021155011854745 2.7021155011854745 2.7021155011854745 2.7021155011854745 0 1.6989700043360187 0.958607314841775 0.7134679910804405 0.0 [{I|L}T][WM]DPV{I|L}TGY;[HT]T{I|L}V[{M(Oxidation (M))|F}E]KTGY;[HT]T{I|L}Y[DP]KTGY;QQ{M(Oxidation (M))|F}{I|L}V[DP]KTGY;[VP]G{[YD]|[{M(Oxidation (M))|F}M]}DPV{I|L}TGY;QQ[VP]V[{M(Oxidation (M))|F}E]KTGY;[{I|L}A][WP][{M(Oxidation (M))|F}E]V{I|L}TGY;[DP][YR]DPV{I|L}TGY;[VP][RD][{M(Oxidation (M))|F}E]V{I|L}TGY;[DP][RV][{M(Oxidation (M))|F}E]V{I|L}TGY 5.1708;4.962;4.5935;4.2042;3.9904;3.958;3.9462;3.8999;3.8659;3.7462 -;-;-;-;-;-;-;-;-;- 355 1 1.514 84560.1 0.5199999809265137 2691 5479 8170 SUDHL4_400M_050219_2,8172 SUDHL4_400M_050219_2,8172,RIMDPDVITGY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8173 43.987 800.0 108030.0 25 0 14659.0 + 31024 RLFQDEEIY 9 87 606.7981068139568 1211.5816606947135 2 606.7983276247978 MULTI CID FTMS 0 0 0 8170 97216.4453125 0.96485716766923 -4 0.1940536499023437 3 Unmodified _RLFQDEEIY_ ENSG00000132017|ENST00000254337|DCAF15 29.43715596616401 0.1566398223704148 6 [R{I|L}]{M(Oxidation (M))|F}QDEE{I|L}Y 9 0 + 69.218 0.0 0.0 5.7131 5.7131 87.328 0.0 0.0 0.0 5.642492736872597 62.22865638833312 5.642492736872597 9.208187539523747 0 1.0 0.0 0.0 0.7614393726401688 + + [R{I|L}]{M(Oxidation (M))|F}QDEE{I|L}Y;[R{I|L}]{M(Oxidation (M))|F}[AG]DEE{I|L}Y;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}E[R{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Y;EED[R{I|L}]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}Y 5.7131;4.953;2.116;1.9744 +;-;-;- + 132 1 1.514 68511.7 0.5 2692 5479 8170 SUDHL4_400M_050219_2,8173 SUDHL4_400M_050219_2,8173,RLFQDEEIY False True RLFQDEEIY 43.987042 606.798327624798 780341.1875 8170.0 ENSG00000132017|ENST00000254337|DCAF15 7.187653541564941 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8174 43.995 475.0 148300.0 25 0 15032.0 + 17849 KQLDDLKVEL 10 108 600.8472005691671 1199.679848205134 2 600.8455688357353 MULTI CID FTMS 0 0 0 8170 117305.953125 0.8211468938560281 -2 0.1277923583984375 4 Unmodified _KQLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 40.714236015149055 0.1500248939241792 6 {NN|[MP]|[D{I|L}]|[EV]}{I|L}AATQKVQN 11 8 + 66.548 0.0 0.0 5.5472 5.5472 78.198 0.0 0.0 0.0 12.21848749616356 1.985680303052959 1.985680303052959 1.2763625255165325 0 0.7897644799392252 1.5228787452803376 0.5 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}{I|L}AATQKVQN;{NN|[MP]|[D{I|L}]|[EV]}{I|L}AATQVKQN;{NN|[MP]|[D{I|L}]|[EV]}QKD{I|L}KVQN;{NN|[MP]|[D{I|L}]|[EV]}QKD{I|L}VKQN;{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}KVQN;{NN|[MP]|[D{I|L}]|[EV]}{I|L}DKQKVQN;{NN|[MP]|[D{I|L}]|[EV]}KQD{I|L}VKQN;{NN|[MP]|[D{I|L}]|[EV]}{I|L}SRQKVQN;{NN|[MP]|[D{I|L}]|[EV]}{I|L}DKQVKQN;{NN|[MP]|[D{I|L}]|[EV]}{I|L}SRQVKQN 5.5472;5.4408;5.3865;5.2801;5.1356;5.1032;5.0292;4.9991;4.9968;4.8927 -;-;-;-;-;-;-;-;-;- 5096 1 1.514 54349.4 1.0 2693 5479 8170 SUDHL4_400M_050219_2,8174 SUDHL4_400M_050219_2,8174,KQLDDLKVEL False True KQLDDLKVEL 43.995456 600.845568835735 575038.125 8170.0 ENST00000487431.1_1_9:127620199-127623861:-|nuORF;;ENSG00000136942|ENST00000348462|RPL35;;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;;ENST00000495728.1_1_9:127623696-127624209:-|nuORF;;ENST00000450819.1_1_1:237144684-237145005:+|nuORF 2.192253073056539 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8176 44.003 289.0 239940.0 25 0 16251.0 -1 0 64 881.9106465213838 1761.8067401095675 2 881.9127685427666 MULTI CID FTMS 0 0 0 8175 199169.75 0.4516948535719852 12 -0.5133590698242188 1 6 AQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 10 -1 75.438 0.0 0.0 4.2819 0.0 0.0 677.33500868965 0.0 677.33500868965 0.0 57.69077524932108 0.0 0.0 0 1.305462187404089 0.0 0.0 1.274227503252014 AQDAN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 4.2819 - 468 1 1.514 51258.5 1.0 2694 5480 8175 SUDHL4_400M_050219_2,8176 SUDHL4_400M_050219_2,8176, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8177 44.014 630.0 147750.0 25 0 10429.0 + 24636 MLPPPPLTA 9 113 476.7621932703769 951.5098336075538 2 476.7623474001884 MULTI CID FTMS 0 0 0 8175 124171.875 0.5001787161777509 4 -0.2148857116699218 2 Oxidation (M) _M(Oxidation (M))LPPPPLTA_ ENSG00000105486|ENST00000263274|LIG1;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1 86.12129899796855 0.0160336270647063 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPPP 6 3 43.153 0.0 0.0 4.5353 0.0 0.0 0.0 300.1562767200129 300.1562767200129 20.28121685032731 0.0 0.0 0.0 0 1.0044321917401078 2.0 0.0 0.0 + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PPPP 4.5353 + + 459 1 1.514 77011.9 1.0 2695 5480 8175 SUDHL4_400M_050219_2,8177 SUDHL4_400M_050219_2,8177,MLPPPPLTA True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8179 44.019 62.0 688500.0 25 0 139680.0 + + 8832 KQYGNEVFL 9 62 549.2849749659862 1096.5553969987725 2 549.2848998904228 MULTI CID FTMS 0 0 0 8178 764241.1875 0.9095604023356066 -2 0.0685348510742187 1 Unmodified _EYQIWVFI_ ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8 28.486842064014134 0.4448922141344407 6 {[QD]|[EN]|[WG]|[KD]|[RS]}GY[KQ]V{M(Oxidation (M))|F}{I|L} 9 -1 + 44.715 0.0 0.0 4.0777 4.0777 75.391 0.0 0.0 0.0 2.852357284807489 8.991210102739586 2.852357284807489 2.852357284807489 0 0.5 0.0 0.3807196863200844 0.8494850021680094 {[QD]|[EN]|[WG]|[KD]|[RS]}GY[KQ]V{M(Oxidation (M))|F}{I|L};[DP]{I|L}[HQ]EV{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}GYV[KQ]{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[YR][KQ]{M(Oxidation (M))|F}{I|L} 4.0777;3.8176;3.4159;1.9387 -;-;-;- 85 1 1.514 40879.5 1.0 2696 5481 8178 SUDHL4_400M_050219_2,8179 SUDHL4_400M_050219_2,8179,EYQIWVFI False False KQYGNEVFL 44.019116 549.284899890423 5075278.5 8178.0 ENST00000484403.5_1_21:30439206-30445917:-|nuORF;;nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 4.567310810089111 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8180 44.022 133.0 385860.0 25 0 64072.0 -1 TDLLVSLLML 10 77 567.3296542590296 1132.644755584859 2 567.3296996951103 MULTI CID FTMS 0 0 0 8178 311161.59375 0.5618536846857014 5 -0.3151206970214844 2 Oxidation (M) _TDLLVSLLM(Oxidation (M))L_ ENST00000468362.5_1_3:186503755-186505556:+|nuORF;ENST00000485101.5_1_3:186505247-186505556:+|nuORF 3.944395688203298 0.708391353636983 6 PP{M(Oxidation (M))|F}{I|L} 4 -1 16.375 0.0 0.0 1.4457 0.0 0.0 660.4105464557559 0.0 660.4105464557559 0.0 16.375175252488248 0.0 0.0 0 0.0 0.0 0.0 0.0 PP{M(Oxidation (M))|F}{I|L} 1.4457 - 22 + 1 1.514 46429.1 1.0 2697 5481 8178 SUDHL4_400M_050219_2,8180 SUDHL4_400M_050219_2,8180,TDLLVSLLML False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8181 44.024 83.0 502810.0 25 0 93031.0 + 27347 PHSSPLALL 9 71 467.77162695849336 933.5287009837868 2 467.7719299197197 MULTI CID FTMS 0 0 0 8178 300777.65625 0.0360080265375405 -6 0.2625885009765625 3 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 24.67388899826682 0.2172451872415813 6 MTA 3 8 19.13 0.0 0.0 2.0492 0.0 0.0 612.3848849210899 0.0 612.3848849210899 0.0 0.4187059558282904 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.0 MTA 2.0492 - 97 + 1 1.514 37816.1 1.0 2698 5481 8178 SUDHL4_400M_050219_2,8181 SUDHL4_400M_050219_2,8181,PHSSPLALL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8182 44.028 254.0 164200.0 25 0 24991.0 + + 18677 ALLGDLTKA 9 69 451.2711568491196 900.5277607650393 2 451.2709533572197 MULTI CID FTMS 0 0 0 8178 163898.765625 0.519858046996917 -2 0.0685348510742187 4 Unmodified _LAISDALKA_ ENSG00000105576|ENST00000425528|TNPO2;ENSG00000083312|ENST00000337273|TNPO1;nc|ENSG00000083312|Q92973-3|TNPO1;ENST00000423641.1_1_10:86150999-86151317:+|nuORF;nc|ENSG00000105576|O14787-2|TNPO2;nc|ENSG00000083312|Q92973-2|TNPO1 25.399314129420983 0.2080152500878129 6 [{I|L}A]{I|L}GD{I|L}T[KA] 9 -1 + 57.954 0.0 0.0 6.4356 6.4356 94.568 0.0 0.0 0.0 41.7098651032213 8.256886463274284 8.256886463274284 57.95425621805954 0 0.4247425010840047 2.0 0.0 0.2614393726401688 [{I|L}A]{I|L}GD{I|L}T[KA] 6.4356 - 68 + 1 1.514 42607.8 1.0 2699 5481 8178 SUDHL4_400M_050219_2,8182 SUDHL4_400M_050219_2,8182,LAISDALKA False False ALLGDLTKA 44.028423 451.27095335722 1632008.625 8178.0 ENSG00000105576|ENST00000425528|TNPO2;;ENSG00000083312|ENST00000337273|TNPO1;;nc|ENSG00000083312|Q92973-3|TNPO1;;ENST00000423641.1_1_10:86150999-86151317:+|nuORF;;nc|ENSG00000105576|O14787-2|TNPO2;;nc|ENSG00000083312|Q92973-2|TNPO1 5.442852258682251 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8183 44.042 800.0 200870.0 25 0 20554.0 + + 20095 KLAEKLTIL 9 164 514.839268296091 1027.6639836589818 2 514.8394042849541 MULTI CID FTMS 0 0 0 8178 142547.0625 0.2977765977996222 -3 0.12628173828125 5 Unmodified _LKAETIKLI_ nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;ENSG00000061676|ENST00000361354|NCKAP1;ENST00000547500.1_1_12:54891564-54894436:+|nuORF;ENSG00000123338|ENST00000293373|NCKAP1L 96.36657018975838 0.0123932121270252 6 [{I|L}T]N{I|L}{I|L}TK{I|L}{I|L} 9 -1 + 85.586 0.0 0.0 8.3282 8.3282 84.233 0.0 0.0 0.0 3.1286094764190864 14.092568545288074 3.1286094764190864 1.1227313277985616 0 1.055462187404089 1.6989700043360187 1.9500612056866315 0.25 [{I|L}T]N{I|L}{I|L}TK{I|L}{I|L};[{I|L}T]N{I|L}T{I|L}K{I|L}{I|L};[{I|L}T]{I|L}N{I|L}TK{I|L}{I|L};[K{I|L}]AE{I|L}TK{I|L}{I|L};[{I|L}T]{I|L}NT{I|L}K{I|L}{I|L};[K{I|L}]AET{I|L}K{I|L}{I|L};[{I|L}T]N{I|L}{I|L}KT{I|L}{I|L};[{I|L}A]KE{I|L}TK{I|L}{I|L};[{I|L}T]N{I|L}{I|L}T{I|L}K{I|L};[{I|L}A]KET{I|L}K{I|L}{I|L} 8.3282;8.2189;8.0971;8.0238;7.9879;7.9145;7.6691;7.646;7.5808;7.5368 -;-;-;-;-;+;-;-;-;- + 6384 1 1.514 124581.7 0.5799999833106995 2700 5481 8178 SUDHL4_400M_050219_2,8183 SUDHL4_400M_050219_2,8183,LKAETIKLI False False KLAEKLTIL 44.042254 514.839404284954 5935567.5 8178.0 nc|ENSG00000061676|Q9Y2A7-2|NCKAP1;;ENSG00000061676|ENST00000361354|NCKAP1;;ENST00000547500.1_1_12:54891564-54894436:+|nuORF;;ENSG00000123338|ENST00000293373|NCKAP1L 3.0527615944544477 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8184 44.055 715.0 107660.0 25 0 6712.4 21018 LNVTTSRPV 9 137 493.7861167870489 985.5576806408978 2 494.2823669314384 MULTI CID FTMS 0 0 0 8178 95332.640625 0.1721963994735628 34 -1.312274932861328 6 Unmodified _LNVTTSRPV_ ENST00000552176.2_17:6916714-6916840:+|nuORF 11.640296217721598 0.521594087909532 6 V 1 8 12.474 0.0 0.0 1.2657 0.0 0.0 868.4781727447049 0.0 868.4781727447049 0.0 0.2557626122369072 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 1.2657 + + 232 + 1 1.514 62137.7 1.0 2701 5481 8178 SUDHL4_400M_050219_2,8184 SUDHL4_400M_050219_2,8184,LNVTTSRPV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8186 44.06 82.0 544140.0 25 0 54525.0 -1 0 47 964.4441837716624 2890.310721915187 3 964.7799560427666 MULTI CID FTMS 0 0 0 8185 605623.6875 0.4460641451758265 1 -0.0268135070800781 1 6 W{I|L}EH 4 -1 17.423 0.0 0.0 0.6028 0.0 0.0 1301.576055022412 1020.4520526986348 2322.0281077210466 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W{I|L}EH 0.6028 - 54 + 1 1.514 43140.3 1.0 2702 5482 8185 SUDHL4_400M_050219_2,8186 SUDHL4_400M_050219_2,8186, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8187 44.062 47.0 1367400.0 25 0 240380.0 + 11724 GLIDKVNEL 9 97 500.7867260662667 999.5588991993334 2 500.7874328494072 MULTI CID FTMS 0 0 0 8185 402200.4375 0.4111130603127859 1 -0.0268135070800781 2 Unmodified _GLIDKVNEL_ ENSG00000100883|ENST00000216774|SRP54;nc|ENSG00000100883|P61011-2|SRP54 41.8396318013385 0.0653578398400075 6 {[VA]|[{I|L}G]}{I|L}CVSKG 8 5 62.133 0.0 0.0 6.216 0.0 0.0 0.0 239.10395227603752 239.10395227603752 37.9785974670763 0.0 0.0 0.0 0 0.75 2.0 0.3252574989159953 0.7302046884880937 {[VA]|[{I|L}G]}{I|L}CVSKG 6.216 - 1314 + 1 1.514 54537.9 1.0 2703 5482 8185 SUDHL4_400M_050219_2,8187 SUDHL4_400M_050219_2,8187,GLIDKVNEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8188 44.063 50.0 1353600.0 25 0 223290.0 + 18881 LATAVTGAALI 11 98 500.80410539833576 999.5936578634715 2 500.8056213259697 MULTI CID FTMS 0 0 0 8185 485496.78125 0.6019289051229619 -1 0.0403175354003906 3 Unmodified _LATAVTGAALI_ ENSG00000188760|ENST00000373883|TMEM198 41.8396318013385 0.1840573104808743 6 {[VA]|[{I|L}G]}[TA]{I|L}ASA{I|L}A{I|L} 11 6 + 53.931 0.0 0.0 5.3953 5.3953 77.716 0.0 0.0 0.0 1.3155999968328302 7.7242544111760125 1.3155999968328302 1.3155999968328302 0 0.6989700043360187 2.0 1.024227503252014 0.0 {[VA]|[{I|L}G]}[TA]{I|L}ASA{I|L}A{I|L};[{I|L}A]{[SA]|[TG]}{I|L}ASA{I|L}A{I|L};{[VA]|[{I|L}G]}EKVSA{I|L}A{I|L};[{I|L}A]DKVSA{I|L}A{I|L};{[VA]|[{I|L}G]}EVKSA{I|L}A{I|L};{[VA]|[{I|L}G]}[VS]VASA{I|L}A{I|L};[{I|L}A]DVKSA{I|L}A{I|L};[{I|L}A][TA]VASA{I|L}A{I|L};{[VA]|[{I|L}G]}EKSVA{I|L}A{I|L};[{I|L}A]DKSVA{I|L}A{I|L} 5.3953;5.2637;5.1598;5.0282;4.9379;4.8268;4.8062;4.6952;4.6825;4.5509 -;-;-;-;-;-;-;-;-;- 1474 1 1.514 57558.8 1.0 2704 5482 8185 SUDHL4_400M_050219_2,8188 SUDHL4_400M_050219_2,8188,LATAVTGAALI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8189 44.07 376.0 352250.0 25 0 52427.0 + 26587 NVPDVYTQI 9 133 524.7690836284975 1047.5236143237948 2 524.7697631716728 MULTI CID FTMS 0 0 0 8185 178001.78125 0.2078856713242177 -2 0.0591964721679687 4 Unmodified _NVPDVYTQI_ ENSG00000144451|ENST00000331683|SPAG16;ENST00000414961.2_1_2:214162027-214228821:+|nuORF;nc|ENSG00000144451|Q8N0X2-3|SPAG16;nc|ENSG00000144451|Q8N0X2-4|SPAG16;nc|ENSG00000144451|Q8N0X2-5|SPAG16 51.629811660486645 0.0367964933207742 6 [DP]VYTQ{I|L}{[NV]|[RG]} 9 4 + 38.712 0.0 0.0 3.6955 3.6955 74.295 0.0 0.0 0.0 2.9435468351864102 4.232712163289278 2.9435468351864102 2.9435468351864102 0 0.0 0.0 1.0629529932484498 0.0 [DP]VYTQ{I|L}{[NV]|[RG]};{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F}EQ{I|L}{[NV]|[RG]};{[QN]|[E{I|L}]|[KN]}TMTQ{I|L}{[NV]|[RG]};{[NV]|[RG]}{I|L}E[MT]TQ{I|L};[DP]VTYQ{I|L}{[NV]|[RG]};[{I|L}T]EMTQ{I|L}{[NV]|[RG]};[DV]PYTQ{I|L}{[NV]|[RG]};{[QN]|[E{I|L}]|[KN]}G{M(Oxidation (M))|F}QE{I|L}{[NV]|[RG]};[VP]DYTQ{I|L}{[NV]|[RG]};[{I|L}T]MTEQ{I|L}{[NV]|[RG]} 3.6955;3.4145;3.4061;3.2747;3.1901;3.1577;3.1081;2.9591;2.94;2.8746 -;-;-;-;-;-;-;-;-;- 2010 1 1.514 107500.4 1.0 2705 5482 8185 SUDHL4_400M_050219_2,8189 SUDHL4_400M_050219_2,8189,NVPDVYTQI True True NVPDVYTQI 44.069739 524.769763171673 5283329.0 8185.0 nc|ENSG00000144451|Q8N0X2-3|SPAG16;;ENST00000414961.2_1_2:214162027-214228821:+|nuORF;;nc|ENSG00000144451|Q8N0X2-4|SPAG16;;ENSG00000144451|ENST00000331683|SPAG16;;nc|ENSG00000144451|Q8N0X2-5|SPAG16 5.255026022593181 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8190 44.075 262.0 480080.0 25 0 43323.0 + -1 NIGAIVIMTI 10 138 530.8094122011559 1059.6042714691116 2 530.8092529177666 MULTI CID FTMS 0 0 0 8185 158756.890625 0.5890088871554332 -1 0.0403175354003906 5 Oxidation (M) _NIGAIVIM(Oxidation (M))TI_ REV__ENSG00000150269|ENST00000279791|OR5M9 13.042465956692816 0.6287021003332052 6 [{I|L}V]NQ{I|L}{I|L} 6 -1 14.02 0.0 0.0 1.3231 0.0 0.0 0.0 376.1615584166304 376.1615584166304 1.8014635245471384 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.0 0.3252574989159953 [{I|L}V]NQ{I|L}{I|L} 1.3231 - 448 1 1.514 100111.4 1.0 2706 5482 8185 SUDHL4_400M_050219_2,8190 SUDHL4_400M_050219_2,8190,NIGAIVIMTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8191 44.081 383.0 331750.0 25 0 54123.0 2091 APRDRLPA 8 134 448.258686655308 894.5028203774159 2 448.2587768435478 MULTI CID FTMS 0 0 0 8185 107058.609375 0.3535386938736927 -2 0.0591964721679687 6 Unmodified _APRDRLPA_ ENST00000412997.5_1_3:20227443-20227779:-|nuORF 2.889219685676258 0.8067950007271085 6 {I|L} 1 7 10.837 0.0 0.0 1.2116 0.0 0.0 763.408046062766 0.0 763.408046062766 0.0 -0.2617076142834218 -0.2617076142834218 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.2116 + + 28 + 1 1.514 101060.4 1.0 2707 5482 8185 SUDHL4_400M_050219_2,8191 SUDHL4_400M_050219_2,8191,APRDRLPA False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8193 44.086 46.0 833500.0 25 0 188110.0 30245 QWTSRKRK 8 53 545.3165147194395 1088.618476505679 2 545.3168823122978 MULTI CID FTMS 0 0 0 8192 1198807.375 0.9467838187285016 -1 0.0268135070800781 1 Unmodified _QWTSRKRK_ ENST00000275820.3_1_7:156745216-156745255:+|nuORF 0.7936320650641473 0.8195151834710337 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.514 36661.4 1.0 2708 5483 8192 SUDHL4_400M_050219_2,8193 SUDHL4_400M_050219_2,8193,QWTSRKRK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8194 44.088 65.0 872960.0 25 0 117220.0 20571 LLNLQATDR 9 84 522.2958238627225 1042.577094792245 2 522.2961303591728 MULTI CID FTMS 0 0 0 8192 656443.1875 1.0 0 0.0 2 Unmodified _LLNLQATDR_ ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000150275|Q96QU1-3|PCDH15;nc|ENSG00000150275|Q96QU1-4|PCDH15;nc|ENSG00000150275|Q96QU1-6|PCDH15;nc|ENSG00000150275|Q96QU1|PCDH15 10.823927491677226 0.5436922275383211 6 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S 4 6 13.188 0.0 0.0 1.2649 0.0 0.0 0.0 612.3198336236936 612.3198336236936 3.654696052055302 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}S 1.2649 - 20 + 1 1.514 50320.9 1.0 2709 5483 8192 SUDHL4_400M_050219_2,8194 SUDHL4_400M_050219_2,8194,LLNLQATDR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8195 44.094 365.0 256120.0 25 0 40962.0 + 34387 SLTVDNLSLKL 11 97 401.5708865726977 1201.690830318293 3 401.5707885622978 MULTI CID FTMS 0 0 0 8192 162728.828125 1.0 0 0.0 3 Unmodified _SLTVDNLSLKL_ REV__ENSG00000181544|ENST00000650831|FANCB 18.3397198061782 0.6536596255577894 6 {[TV]|[{I|L}S]}{I|L}DDKA{I|L}SK{I|L} 11 -1 + 57.602 0.0 0.0 4.7934 4.7934 77.499 0.0 0.0 0.0 45.38351054568237 2.6366033629410026 2.6366033629410026 2.7620641193894926 0 0.6989700043360187 2.0 0.4247425010840047 0.0 {[TV]|[{I|L}S]}{I|L}DDKA{I|L}SK{I|L};{[TV]|[{I|L}S]}{I|L}DDKA{I|L}S{I|L}K 4.7934;4.5636 -;- 151 + 1 1.514 74690.5 1.0 2710 5483 8192 SUDHL4_400M_050219_2,8195 SUDHL4_400M_050219_2,8195,SLTVDNLSLKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8196 44.099 275.0 226330.0 25 0 29380.0 + 27576 PLDAAIITV 9 86 456.7722895990624 0 456.7724182009697 PEAK CID FTMS 0 0 0 8192 152998.234375 0.8199625502569907 -1 0.0268135070800781 4 Unmodified _PLDAAIITV_ REV__ENST00000509910.1_1_5:115167175-115167292:-|nuORF 7.910154910731844 0.3362437653303669 6 MSVA 4 -1 21.67 0.0 0.0 2.3773 0.0 0.0 455.3351848116029 65.00408350162343 520.3392683132263 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 MSVA 2.3773 - 30 + 1 1.514 54640.0 1.0 2711 5483 8192 SUDHL4_400M_050219_2,8196 SUDHL4_400M_050219_2,8196,PLDAAIITV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8197 44.109 570.0 193940.0 25 0 29884.0 + 14984 ILQNKIDLV 9 127 528.3264574465536 1054.6383619599071 2 528.3268920779228 MULTI CID FTMS 0 0 0 8192 144386.796875 1.0 0 0.0 5 Unmodified _ILQNKIDLV_ ENSG00000130741|ENST00000253039|EIF2S3;ENSG00000180574|ENST00000538173|EIF2S3B;ENST00000487075.1_1_X:24073085-24080702:+|nuORF;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 66.45667989310934 0.0225072657982126 6 {I|L}{I|L}Q[QT]Q{I|L} 7 5 50.01 0.0 0.0 4.7419 0.0 0.0 0.0 227.13918217333847 227.13918217333847 26.734611294499857 0.0 0.0 0.0 0 0.9731975075880328 2.0 0.3252574989159953 0.7059771852360797 {I|L}{I|L}Q[QT]Q{I|L} 4.7419 - 1380 1 1.514 90329.6 1.0 2712 5483 8192 SUDHL4_400M_050219_2,8197 SUDHL4_400M_050219_2,8197,ILQNKIDLV True True ILQNKIDLV 44.109443 528.326892077923 815812.125 8192.0 ENSG00000180574|ENST00000538173|EIF2S3B;;ENST00000487075.1_1_X:24073085-24080702:+|nuORF;;ENSG00000130741|ENST00000253039|EIF2S3;;nc|ENSG00000180574|Q2VIR3-2|EIF2S3B 3.5907103220621743 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8198 44.123 800.0 37949.0 25 0 2969.3 + 30860 RIMDPDVITGY 11 62 640.3208776935226 1278.627202453845 2 640.3207885622978 MULTI CID FTMS 0 0 0 8192 117923.0625 1.0 0 0.0 6 Unmodified _RIMDPDVITGY_ ENSG00000062822|ENST00000440232|POLD1 12.872603262515298 0.7673816944342327 6 TGY 3 8 25.49 0.0 0.0 1.9935 0.0 0.0 939.4844545063826 0.0 939.4844545063826 0.0 16.90614065464281 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 + TGY 1.9935 + + 19 + 1 1.514 31415.0 0.5400000214576721 2713 5483 8192 SUDHL4_400M_050219_2,8198 SUDHL4_400M_050219_2,8198,RIMDPDVITGY False True RIMDPDVITGY 44.123278 640.320788562298 623098.9375 8192.0 ENSG00000062822|ENST00000440232|POLD1 7.1631191571553545 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8199 44.137 800.0 144470.0 25 0 31056.0 -1 0 104 857.9286056945348 1713.8426584558697 2 857.9396240115166 MULTI CID FTMS 0 0 0 8192 112325.15625 0.2344673429141437 -12 0.3962974548339844 7 6 {[QV]|[N{I|L}]|[RA]|[KV]}QS[YK]QDANKVP 13 -1 64.712 0.0 0.0 3.7758 0.0 0.0 0.0 225.08768609615012 225.08768609615012 29.050160555838715 0.0 0.0 0.0 0 0.1822333069283654 2.0 0.5629529932484498 1.633803120088516 {[QV]|[N{I|L}]|[RA]|[KV]}QS[YK]QDANKVP 3.7758 - 2962 1 1.514 81852.3 0.5099999904632568 2714 5483 8192 SUDHL4_400M_050219_2,8199 SUDHL4_400M_050219_2,8199, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8200 44.151 800.0 138240.0 25 0 7853.2 + 20516 LLLPGPSAA 9 136 419.75537868309374 837.4962044329875 2 419.7550536990166 MULTI CID FTMS 0 0 0 8192 105122.28125 1.0 0 0.0 8 Unmodified _LLLPGPSAA_ ENSG00000166794|ENST00000300026|PPIB;ENST00000561048.1_1_15:64452264-64455191:-|nuORF 40.44857923139169 0.0729940656229577 6 {I|L}{I|L}{I|L} 3 6 28.222 0.0 0.0 3.3698 0.0 0.0 0.0 495.2207277086313 495.2207277086313 14.242384662175276 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.0 0.0 + {I|L}{I|L}{I|L} 3.3698 + + 112 1 1.514 92713.1 0.949999988079071 2715 5483 8192 SUDHL4_400M_050219_2,8200 SUDHL4_400M_050219_2,8200,LLLPGPSAA True True LLLPGPSAA 44.150947 419.755053699017 711495.75 8192.0 ENST00000561048.1_1_15:64452264-64455191:-|nuORF;;ENSG00000166794|ENST00000300026|PPIB 4.291995048522949 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8201 44.162 643.0 392770.0 25 0 35253.0 -1 VMAPRTVLL 9 154 508.30153861518113 1014.5885242971624 2 508.3021423220634 MULTI CID FTMS 0 0 0 8192 106674.7578125 0.079217549251864 -4 0.1356658935546875 9 Oxidation (M) _VM(Oxidation (M))APRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 29.84058131909904 0.1515068451768857 6 V{M(Oxidation (M))|F}AP 4 -1 40.972 0.0 0.0 4.0383 0.0 0.0 0.0 597.3740328424436 597.3740328424436 -3.263508646533765 0.0 -3.263508646533765 0.0 0 1.0 0.7695510786217261 0.0 0.0 V{M(Oxidation (M))|F}AP 4.0383 + + 473 + 1 1.514 192003.5 1.0 2716 5483 8192 SUDHL4_400M_050219_2,8201 SUDHL4_400M_050219_2,8201,VMAPRTVLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8202 44.177 800.0 98701.0 25 0 4633.6 + 17275 KLPPVVGI 8 120 411.7762323220164 821.5379117108329 2 411.7757751345634 MULTI CID FTMS 0 0 0 8192 99164.2890625 0.7361048849346531 3 -0.2479896545410156 10 Unmodified _KLPPVVGI_ ENSG00000143479|ENST00000367109|DYRK3;nc|ENSG00000143479|O43781-2|DYRK3 26.34127834903884 0.4900704351052977 6 [VP]P[K{I|L}]VG{I|L} 8 4 + 17.893 0.0 0.0 2.1779 2.1779 73.368 0.0 0.0 0.0 0.4575749056067515 10.201812293369844 0.4575749056067515 4.471580313422196 0 0.6989700043360187 0.0 0.0 0.4247425010840047 [VP]P[K{I|L}]VG{I|L};{[HG]|PP}V[K{I|L}]VG{I|L};[VP]PV[K{I|L}]G{I|L};[VP]VP[K{I|L}]G{I|L};{[HG]|PP}VV[K{I|L}]G{I|L} 2.1779;1.6336;1.5972;1.1128;1.0529 -;-;-;-;- 113 1 1.514 66175.5 0.4000000059604645 2717 5483 8192 SUDHL4_400M_050219_2,8202 SUDHL4_400M_050219_2,8202,KLPPVVGI False True KLPPVVGI 44.177455 411.775775134563 746527.0625 8192.0 ENSG00000143479|ENST00000367109|DYRK3;;nc|ENSG00000143479|O43781-2|DYRK3 2.253713170687357 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8203 44.189 685.0 269870.0 25 0 12014.0 5967 DQQLEFLNEI 10 143 624.8102139266283 1247.6058749200563 2 624.8109008669853 MULTI CID FTMS 0 0 0 8192 97744.0390625 0.3492540882416128 -1 0.0268135070800781 11 Unmodified _DQQLEFLNEI_ ENSG00000123607|ENST00000243344|TTC21B;ENST00000464374.5_1_2:166785584-166810215:-|nuORF;nc|ENSG00000123607|Q7Z4L5-2|TTC21B 103.41943736471065 0.0068563894390004 6 [AG]D{I|L}E{M(Oxidation (M))|F}{I|L}QNE{I|L} 11 4 + 114.85 0.0 0.0 9.2055 9.2055 92.183 0.0 0.0 0.0 8.019409375905738 16.575773191777927 8.019409375905738 8.019409375905738 0 1.2346368802282015 1.6989700043360187 2.166386562212267 1.110924374808178 [AG]D{I|L}E{M(Oxidation (M))|F}{I|L}QNE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{M(Oxidation (M))|F}{I|L}QNE{I|L};[AG]{M(Oxidation (M))|F}{I|L}ED{I|L}QNE{I|L};[AG]D{I|L}E{M(Oxidation (M))|F}{I|L}QGGE{I|L};[AG]{I|L}{M(Oxidation (M))|F}ED{I|L}QNE{I|L};[AG]D{I|L}E{I|L}{M(Oxidation (M))|F}QNE{I|L};[AG]{I|L}DE{M(Oxidation (M))|F}{I|L}QNE{I|L};[AG]D{I|L}E{M(Oxidation (M))|F}{I|L}[AG]NE{I|L};[AG]{M(Oxidation (M))|F}E{I|L}D{I|L}QNE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}E{M(Oxidation (M))|F}{I|L}[AG]NE{I|L} 9.2055;8.5627;8.5093;8.4738;8.268;8.223;8.1765;8.1686;7.8856;7.8281 -;-;-;-;-;-;-;-;-;- 11388 1 1.514 146536.2 1.0 2718 5483 8192 SUDHL4_400M_050219_2,8203 SUDHL4_400M_050219_2,8203,DQQLEFLNEI True True KMIEDLQNEL 44.189374 624.810900866985 1317044.5 8192.0 ENSG00000198887|ENST00000361138|SMC5 6.520476659138997 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8204 44.201 617.0 151760.0 25 0 26928.0 + 5292 DLAYKWLRI 9 114 589.3425237759607 1176.6704946187212 2 589.3417236208916 MULTI CID FTMS 0 0 0 8192 89260.15625 0.1482553688444819 -16 0.5016746520996094 12 Unmodified _DLAYKWLRI_ REV__ENSG00000141965|ENST00000269856|FEM1A;REV__ENST00000431297.1_1_21:15134673-15136650:+|nuORF 7.910154910731844 0.6385446671287552 6 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F} 4 -1 27.14 0.0 0.0 2.3065 0.0 0.0 0.0 727.4311810569797 727.4311810569797 17.140012553530966 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.3494850021680094 0.0 {NN|[MP]|[D{I|L}]|[EV]}A{M(Oxidation (M))|F} 2.3065 - 51 1 1.514 73072.9 1.0 2719 5483 8192 SUDHL4_400M_050219_2,8204 SUDHL4_400M_050219_2,8204,DLAYKWLRI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8205 44.21 510.0 106160.0 25 0 14332.0 + -1 ILDGNQLHI 9 98 512.2653431168934 1022.5161333005868 2 512.2655517458916 MULTI CID FTMS 0 0 0 8192 206759.265625 0.6550140733604666 4 -0.3040657043457031 13 Carbamidomethyl (C),Oxidation (M) _LILM(Oxidation (M))LC(Carbamidomethyl (C))SSA_ nc|ENSG00000009307|O75534-2|CSDE1;nc|ENSG00000009307|O75534-3|CSDE1;nc|ENSG00000009307|O75534-4|CSDE1;ENSG00000009307|ENST00000358528|CSDE1 12.531546534597751 0.4974689918368763 6 {I|L}{I|L}RE 4 -1 23.901 0.0 0.0 2.3375 0.0 0.0 0.0 508.19343774525095 508.19343774525095 13.812281309285623 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}RE 2.3375 - 93 1 1.514 46456.9 1.0 2720 5483 8192 SUDHL4_400M_050219_2,8205 SUDHL4_400M_050219_2,8205,LILMLCSSA False False ILDGNQLHI 44.210334 512.265551745892 483989.96875 8192.0 nc|ENSG00000009307|O75534-2|CSDE1;;nc|ENSG00000009307|O75534-3|CSDE1;;nc|ENSG00000009307|O75534-4|CSDE1;;ENSG00000009307|ENST00000358528|CSDE1 0.258938267827034 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8207 44.215 43.0 946820.0 25 0 191880.0 + 14750 ILDEAIYKV 9 53 532.3050900840765 1062.5956272349529 2 532.3054077029228 MULTI CID FTMS 0 0 0 8206 920850.625 0.3734901563701251 1 -0.0766830444335937 1 Unmodified _ILDEAIYKV_ ENSG00000166578|ENST00000416617|IQCD;nc|ENSG00000166578|Q96DY2-2|IQCD;nc|ENSG00000166578|Q96DY2-3|IQCD 36.506200033944 0.094635877243972 6 {I|L}{I|L}DEA{I|L}Y{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 77.374 0.0 0.0 7.2816 7.2816 96.832 0.0 0.0 0.0 61.17599686953518 4.762036441594191 4.762036441594191 77.37388445241912 0 1.2302046884880935 2.0 0.0 0.0 + + {I|L}{I|L}DEA{I|L}Y{[QV]|[N{I|L}]|[RA]|[KV]} 7.2816 + + 87 + 1 1.514 38027.0 1.0 2721 5484 8206 SUDHL4_400M_050219_2,8207 SUDHL4_400M_050219_2,8207,ILDEAIYKV True True ILDEAIYKV 44.215424 532.305407702923 12068682.0 8206.0 nc|ENSG00000166578|Q96DY2-2|IQCD;;nc|ENSG00000166578|Q96DY2-3|IQCD;;ENSG00000166578|ENST00000416617|IQCD 6.862804730733235 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8208 44.218 107.0 232920.0 25 0 19751.0 28802 PYRCKIKAP 9 63 538.3088172384545 1074.6030815437089 2 538.3088256716728 MULTI CID FTMS 0 0 0 8206 502698.9375 0.9900507274054652 1 -0.0766830444335937 2 Unmodified _PYRCKIKAP_ ENSG00000158864|ENST00000676972|NDUFS2;ENST00000483804.5_1_1:161179060-161183980:+|nuORF;ENST00000492153.1_1_1:161183142-161183728:+|nuORF;ENST00000493849.5_1_1:161182144-161183624:+|nuORF;nc|ENSG00000158864|O75306-2|NDUFS2 2.059750862983233 0.8427793054688888 6 Y 1 8 1.5938 0.0 0.0 0.14831 0.0 0.0 420.2592227564026 488.2515352838501 908.5107580402528 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.14831 + + 7 + 1 1.514 26984.7 1.0 2722 5484 8206 SUDHL4_400M_050219_2,8208 SUDHL4_400M_050219_2,8208,PYRCKIKAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8209 44.22 92.0 452830.0 25 0 26920.0 + 13413 HLLNESPML 9 65 535.2705737333995 1068.5265945335989 2 535.2708618044853 MULTI CID FTMS 0 0 0 8206 515329.46875 1.0 0 0.0 3 Oxidation (M) _HLLNESPM(Oxidation (M))L_ ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 42.09456458481378 0.0639583784996157 6 [H{I|L}]{I|L}NES 6 3 46.119 0.0 0.0 4.3162 0.0 0.0 0.0 372.1588136724711 372.1588136724711 32.47425010840047 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.5 0.0 + [H{I|L}]{I|L}NES 4.3162 + + 78 1 1.514 41019.1 1.0 2723 5484 8206 SUDHL4_400M_050219_2,8209 SUDHL4_400M_050219_2,8209,HLLNESPML True False HLLNESPML 44.21974 535.270861804485 2606079.5 8206.0 ENSG00000155561|ENST00000285968|NUP205;;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 7.913673082987468 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8210 44.222 112.0 449830.0 25 0 83348.0 + 19556 LFREISKLT 9 77 553.830663241412 1105.646773549624 2 553.8302490115166 MULTI CID FTMS 0 0 0 8206 503725.78125 1.0 0 0.0 4 Unmodified _LFREISKLT_ REV__ENSG00000083168|ENST00000265713|KAT6A 2.059750862983233 0.8427793054688888 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.514 44184.9 1.0 2724 5484 8206 SUDHL4_400M_050219_2,8210 SUDHL4_400M_050219_2,8210,LFREISKLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8211 44.236 800.0 233860.0 25 0 58123.0 -1 0 72 1178.1495996284907 3531.426969485672 3 1178.818164050579 MULTI CID FTMS 0 0 0 8206 448160.40625 1.0 0 0.0 5 6 MTVV 4 -1 11.503 0.0 0.0 0.32573 0.0 0.0 2587.9459647022727 510.231759893225 3098.1777245954977 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 MTVV 0.32573 - 176 + 1 1.514 154210.4 0.9900000095367432 2725 5484 8206 SUDHL4_400M_050219_2,8211 SUDHL4_400M_050219_2,8211, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8212 44.239 151.0 651560.0 25 0 105240.0 + 13257 HIIENIVAV 9 83 504.2977804640929 1006.5810079949858 2 504.2979003787041 MULTI CID FTMS 0 0 0 8206 352598.90625 0.1139453518691692 -4 0.2148857116699218 6 Unmodified _HIIENIVAV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 64.23631603340823 0.0237365939569086 6 [H{I|L}]{I|L}EN{I|L}VAV 9 0 + 72.444 0.0 0.0 7.197 7.197 93.604 0.0 0.0 0.0 21.12704280191288 49.22217151252408 21.12704280191288 13.080371765640422 0 1.0994850021680094 1.3979400086720375 0.3054621874040891 0.7302046884880937 + + [H{I|L}]{I|L}EN{I|L}VAV;[H{I|L}]{I|L}ENV{I|L}AV;[H{I|L}]{I|L}EGG{I|L}VAV;[H{I|L}]{I|L}EGGV{I|L}AV;{[QN]|[E{I|L}]|[KN]}N{I|L}H{I|L}VAV;{[QN]|[E{I|L}]|[KN]}NH{I|L}{I|L}VAV;{[VA]|[{I|L}G]}{[DA]|[EG]}{I|L}H{I|L}VAV;{[VA]|[{I|L}G]}{[DA]|[EG]}H{I|L}{I|L}VAV;{[QN]|[E{I|L}]|[KN]}[H{I|L}]N{I|L}VAV;{[QN]|[E{I|L}]|[KN]}GG{I|L}H{I|L}VAV 7.197;5.8975;5.5568;4.6355;4.5944;4.3916;4.168;3.9652;3.9454;3.6796 +;-;-;-;-;-;-;-;-;- + 319 1 1.514 80625.1 1.0 2726 5484 8206 SUDHL4_400M_050219_2,8212 SUDHL4_400M_050219_2,8212,HIIENIVAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8213 44.244 249.0 298210.0 25 0 33958.0 + 33968 SLIEQTTAL 9 118 488.2713082330918 974.5280635329837 2 488.2711669802666 MULTI CID FTMS 0 0 0 8206 239082.53125 1.0 0 0.0 7 Unmodified _SLIEQTTAL_ ENSG00000111790|ENST00000229395|FGFR1OP2;ENST00000395941.4_1_12:27107091-27110700:+|nuORF;nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2 20.453626601364224 0.2830276176381075 6 {[TV]|[{I|L}S]}{I|L}RAVT 7 5 26.234 0.0 0.0 2.692 0.0 0.0 0.0 231.0599598555024 231.0599598555024 7.478429962758142 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.5 {[TV]|[{I|L}S]}{I|L}RAVT 2.692 - 400 1 1.514 59541.1 1.0 2727 5484 8206 SUDHL4_400M_050219_2,8213 SUDHL4_400M_050219_2,8213,SLIEQTTAL False True SLIEQTTAL 44.243592 488.271166980267 1270221.625 8206.0 nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2;;ENST00000395941.4_1_12:27107091-27110700:+|nuORF;;nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2;;ENSG00000111790|ENST00000229395|FGFR1OP2 -0.0593140920003255 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8214 44.249 304.0 234580.0 25 0 13895.0 -1 0 82 864.9078448806395 1727.8011368280788 2 865.4103881716728 MULTI CID FTMS 0 0 0 8206 212296.703125 0.7831840726734538 -1 0.128875732421875 8 6 [MN]PN{I|L}NE[WY]KN{I|L} 12 -1 68.599 0.0 0.0 3.9703 0.0 0.0 0.0 208.07312952213127 208.07312952213127 40.97418457616534 0.0 0.0 0.0 0 0.7302046884880937 1.5228787452803376 0.0 0.3494850021680094 [MN]PN{I|L}NE[WY]KN{I|L} 3.9703 - 946 + 1 1.514 54599.0 1.0 2728 5484 8206 SUDHL4_400M_050219_2,8214 SUDHL4_400M_050219_2,8214, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8215 44.259 580.0 165020.0 25 0 14082.0 + 13411 HLLNESPML 9 127 527.2729391926847 1052.5313254521693 2 527.2734863162041 MULTI CID FTMS 0 0 0 8206 140636.546875 0.6395414182400284 -1 0.128875732421875 9 Unmodified _HLLNESPML_ ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 41.95555342248728 0.0647214845423414 6 [H{I|L}]{I|L}NESPM{I|L} 9 0 + 60.812 0.0 0.0 5.7777 5.7777 83.841 0.0 0.0 0.0 5.740312677277188 18.95242492728684 5.740312677277188 5.740312677277188 0 1.1989700043360187 1.0969100130080565 0.5 0.0 + + [H{I|L}]{I|L}NESPM{I|L};{I|L}{I|L}HNESPM{I|L};[H{I|L}]{I|L}GGESPM{I|L};{I|L}{I|L}HGGESPM{I|L};[H{I|L}]{I|L}NE[WE]{I|L};{I|L}{I|L}HNE[WE]{I|L};[H{I|L}]{I|L}NH[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L};[{I|L}V][HQ]ESPM{I|L};[H{I|L}]{I|L}GGE[WE]{I|L};{I|L}{I|L}HNH[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]{I|L} 5.7777;5.2323;4.9028;4.3575;4.2376;3.6922;3.6656;3.5099;3.3576;3.1202 +;-;-;-;-;-;-;-;-;- + 414 1 1.514 84513.6 1.0 2729 5484 8206 SUDHL4_400M_050219_2,8215 SUDHL4_400M_050219_2,8215,HLLNESPML True True HLLNESPML 44.25934 527.273486316204 1155126.375 8206.0 ENSG00000155561|ENST00000285968|NUP205;;ENST00000607647.5_1_7:135285632-135291519:+|nuORF 7.671547889709473 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8216 44.273 800.0 82218.0 25 0 6410.5 + -1 RIMDPDVITGY 11 89 648.3182649032743 1294.6219768733486 2 648.3191406130791 MULTI CID FTMS 0 0 0 8206 116424.34375 0.5352149764498911 3 -0.1751899719238281 10 Oxidation (M) _RIM(Oxidation (M))DPDVITGY_ ENSG00000062822|ENST00000440232|POLD1 18.721224879955976 0.6457238982085786 6 [HT]T{I|L}V[{M(Oxidation (M))|F}E]KTGY 11 -1 + 59.992 0.0 0.0 4.634 4.634 77.885 0.0 0.0 0.0 3.48007882992318 3.48007882992318 3.48007882992318 3.48007882992318 0 0.5 0.0 0.0 0.0 [HT]T{I|L}V[{M(Oxidation (M))|F}E]KTGY;[{I|L}T][WM]DPV{I|L}TGY;{[QN]|[E{I|L}]|[KN]}[QP][{M(Oxidation (M))|F}E]V{I|L}TGY;[HT]T{I|L}Y[DP]KTGY;[HT]T{I|L}[DP]YKTGY;{[QN]|[E{I|L}]|[KN]}[QP][DP]Y{I|L}TGY;[{I|L}T][WM]V[DP]{I|L}TGY;{[QN]|[E{I|L}]|[KN]}[QP]Y[DP]{I|L}TGY;[VP][RD][{M(Oxidation (M))|F}E]V{I|L}TGY;[VP][RD][DP]Y{I|L}TGY 4.634;4.3651;4.0506;3.9812;3.8004;3.3978;3.3626;3.217;2.9999;2.3472 -;-;-;-;-;-;-;-;-;- 284 + 1 1.514 58112.1 0.5400000214576721 2730 5484 8206 SUDHL4_400M_050219_2,8216 SUDHL4_400M_050219_2,8216,RIMDPDVITGY False False RIMDPDVITGY 44.273177 648.319140613079 3090150.75 8206.0 ENSG00000062822|ENST00000440232|POLD1 8.427451292673746 2.0 True 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8217 44.287 800.0 88396.0 25 0 12746.0 31421 RPLRPRPSLP 10 105 594.8690717500232 1187.7235905668465 2 594.8694335818291 MULTI CID FTMS 0 0 0 8206 83605.546875 1.0 0 0.0 11 Unmodified _RPLRPRPSLP_ chr2:88747705-88749981|15|13.6|0.05|8.2|+|2|TE_info:L1PB1,L1PB1_dup1209,L1,LINE,donor,-,88745221,88747705|None,RPIA|37 3.2813086475875832 0.7114585191678878 6 Q 1 10 11.259 0.0 0.0 0.94795 0.0 0.0 1041.6537643723134 0.0 1041.6537643723134 0.0 2.577249674798592 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.94795 - 99 + 1 1.514 56648.1 0.4600000083446502 2731 5484 8206 SUDHL4_400M_050219_2,8217 SUDHL4_400M_050219_2,8217,RPLRPRPSLP False False False False TE_chimeric_transcript PXD020620_cell_line SUDHL4_400M_050219_2 8219 44.292 7.0 6103600.0 25 0 1893900.0 + 27348 PHSSPLALL 9 53 467.77162695849336 933.5287009837868 2 467.7717162966728 MULTI CID FTMS 0 0 0 8218 7874099.5 0.9426590634763437 -2 0.2055587768554687 1 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 30.22481116460888 0.1466181017706357 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 9 4 + 42.425 0.0 0.0 4.5446 4.5446 81.221 0.0 0.0 0.0 5.642492736872597 35.435684192257995 5.642492736872597 8.010299956639805 0 0.9247425010840048 0.0 1.305462187404089 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]{I|L}[PS]{I|L} 4.5446;3.6866 -;- 44 1 1.514 36813.0 1.0 2732 5485 8218 SUDHL4_400M_050219_2,8219 SUDHL4_400M_050219_2,8219,PHSSPLALL False True PHSSPLALL 44.291806 467.771716296673 126897960.0 8218.0 ENST00000517495.1_1_8:41132739-41134502:-|nuORF 1.1265821363776922 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8220 44.298 369.0 215230.0 25 0 23392.0 + 20096 LKAETIKLI 9 118 514.839268296091 1027.6639836589818 2 514.8395873904228 MULTI CID FTMS 0 0 0 8218 181141.53125 0.3783993016049625 1 -0.0424308776855468 2 Unmodified _LKAETIKLI_ REV__ENSG00000136811|ENST00000351030|ODF2;REV__nc|ENSG00000136811|Q5BJF6-10|ODF2;REV__nc|ENSG00000136811|Q5BJF6-2|ODF2;REV__nc|ENSG00000136811|Q5BJF6-3|ODF2;REV__nc|ENSG00000136811|Q5BJF6-4|ODF2;REV__nc|ENSG00000136811|Q5BJF6-5|ODF2;REV__nc|ENSG00000136811|Q5BJF6-6|ODF2;REV__nc|ENSG00000136811|Q5BJF6-7|ODF2;REV__nc|ENSG00000136811|Q5BJF6-8|ODF2;REV__nc|ENSG00000136811|Q5BJF6-9|ODF2;REV__nc|ENSG00000136811|Q5BJF6|ODF2 82.5293158979368 0.0169039238599547 6 [{I|L}T]{I|L}N{I|L}TK{I|L}{I|L} 9 -1 + 81.156 0.0 0.0 7.8971 7.8971 88.147 0.0 0.0 0.0 13.902120561287916 8.072420927872002 8.072420927872002 4.528937514676485 0 1.048455006504028 1.5228787452803376 1.8452788787511367 0.2887254899964357 [{I|L}T]{I|L}N{I|L}TK{I|L}{I|L};[{I|L}T]{I|L}NT{I|L}K{I|L}{I|L};[{I|L}T]{I|L}N{I|L}KT{I|L}{I|L};[{I|L}T]{I|L}N{I|L}T{I|L}K{I|L};[{I|L}T]{I|L}GG{I|L}TK{I|L}{I|L};[{I|L}T]{I|L}NT{I|L}{I|L}K{I|L};[{I|L}T]{I|L}GGT{I|L}K{I|L}{I|L};[{I|L}A]EK{I|L}TK{I|L}{I|L};[{I|L}T]{I|L}GG{I|L}KT{I|L}{I|L};{I|L}{I|L}TN{I|L}TK{I|L}{I|L} 7.8971;7.4564;7.3541;7.0508;7.0011;6.6101;6.5604;6.5444;6.4581;6.3641 -;-;-;-;-;-;-;-;-;- 2193 1 1.514 64298.8 1.0 2733 5485 8218 SUDHL4_400M_050219_2,8220 SUDHL4_400M_050219_2,8220,LKAETIKLI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8221 44.3 50.0 1027300.0 25 0 103780.0 + 38698 TTPVKITLT 9 90 487.3000690738352 972.5855852144704 2 487.3001586794853 MULTI CID FTMS 0 0 0 8218 971337.0 0.4724812242016892 -2 0.2055587768554687 3 Unmodified _TTPVKITLT_ ENSG00000139970|ENST00000267484|RTN1 49.93300154707207 0.0405168250806675 6 [{I|L}T]TPKVTT{I|L} 9 5 + 68.392 0.0 0.0 7.032 7.032 83.414 0.0 0.0 0.0 2.78684514656301 16.478174818886373 2.78684514656301 1.974987195809419 0 1.2134679910804405 1.3979400086720375 0.9247425010840048 0.0 [{I|L}T]TPKVTT{I|L};[{I|L}T]GVG{I|L}VTT{I|L};{[DS]|[MA]|[CV]|TT}PK{I|L}VTT{I|L};{[DS]|[MA]|[CV]|TT}P{I|L}KVTT{I|L};{[DS]|[MA]|[CV]|TT}{I|L}PKVTT{I|L};{[TV]|[{I|L}S]}AVG{I|L}VTT{I|L};{[DS]|[MA]|[CV]|TT}PV[K{I|L}]TT{I|L};[PS]{I|L}T[K{I|L}]TT{I|L};[VG][{I|L}T]G{I|L}VTT{I|L};{[TV]|[{I|L}S]}PT[K{I|L}]TT{I|L} 7.032;6.8289;6.7455;6.7455;6.3821;5.9681;5.7461;5.5271;5.4204;5.2256 -;-;-;-;-;-;-;-;-;- 668 1 1.514 44389.3 1.0 2734 5485 8218 SUDHL4_400M_050219_2,8221 SUDHL4_400M_050219_2,8221,TTPVKITLT True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8222 44.302 102.0 756870.0 25 0 281720.0 + 42994 VVVDPIQSV 9 81 478.2764653182795 954.5383777033592 2 478.2773620486259 MULTI CID FTMS 0 0 0 8218 379062.53125 0.5800812917151582 -2 0.2055587768554687 4 Unmodified _VVVDPIQSV_ ENSG00000115233|ENST00000409682|PSMD14 52.268347100219714 0.0353964759249114 6 VVDVP{I|L} 6 5 31.212 0.0 0.0 3.2698 0.0 0.0 0.0 329.14559140869034 329.14559140869034 7.02078257768629 0.0 0.0 0.0 0 0.6139829889124311 1.6989700043360187 0.0 0.0 VVDVP{I|L} 3.2698 - 141 1 1.514 65544.9 1.0 2735 5485 8218 SUDHL4_400M_050219_2,8222 SUDHL4_400M_050219_2,8222,VVVDPIQSV True True VVVDPIQSV 44.30194 478.277362048626 7381160.0 8218.0 ENSG00000115233|ENST00000409682|PSMD14 7.304984092712402 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8223 44.305 151.0 356930.0 25 0 33622.0 + 39376 GIHPDDLSF 9 86 500.2831885975156 0 500.2830688357353 PEAK CID FTMS 0 0 0 8218 208281.765625 0.5286130014365706 -5 0.2915687561035156 5 Unmodified _VAHTVNFVL_ nc|ENSG00000254087|P07948-2|LYN;ENSG00000254087|ENST00000519728|LYN 9.347437153973935 0.3197567915069932 6 N 1 8 7.232 0.0 0.0 0.72425 0.0 0.0 385.2064395956188 496.27331577568486 881.4797553713036 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + N 0.72425 + + 59 + 1 1.514 51120.0 1.0 2736 5485 8218 SUDHL4_400M_050219_2,8223 SUDHL4_400M_050219_2,8223,VAHTVNFVL False False GIHPDDLSF 44.304946 500.283068835735 1556689.625 8218.0 nc|ENSG00000254087|P07948-2|LYN;;ENSG00000254087|ENST00000519728|LYN 0.8439420759677887 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8224 44.312 392.0 244140.0 25 0 40158.0 + -1 VRKVQFPIM 9 107 567.3296542590296 1132.644755584859 2 567.3299438357353 MULTI CID FTMS 0 0 0 8218 150597.5 0.2719286762216454 9 -0.2823295593261719 6 Oxidation (M) _VRKVQFPIM(Oxidation (M))_ REV__ENST00000509330.5_1_6:64394512-64394560:+|nuORF 5.230669730166228 0.7320841359114558 6 PP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4 -1 11.427 0.0 0.0 1.0088 0.0 0.0 660.4117629605236 0.0 660.4117629605236 0.0 11.42667503568731 0.0 0.0 0 0.0 0.0 0.0 0.0 PP{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 1.0088 - 21 + 1 1.514 77268.6 1.0 2737 5485 8218 SUDHL4_400M_050219_2,8224 SUDHL4_400M_050219_2,8224,VRKVQFPIM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8225 44.319 398.0 183880.0 25 0 17787.0 17951 KQYGNEVFL 9 117 549.2849749659862 1096.5553969987725 2 549.2851440310478 MULTI CID FTMS 0 0 0 8218 141363.046875 0.1682429995844894 2 -0.0985069274902343 7 Unmodified _KQYGNEVFL_ ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 24.99096001346401 0.2132109383330889 6 [Y{I|L}]DV[DN]V 7 7 33.138 0.0 0.0 3.022 0.0 0.0 0.0 275.1398445908223 275.1398445908223 8.199397642263339 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.2742275032520141 0.7742275032520141 [Y{I|L}]DV[DN]V 3.022 - 465 1 1.514 62625.5 1.0 2738 5485 8218 SUDHL4_400M_050219_2,8225 SUDHL4_400M_050219_2,8225,KQYGNEVFL False True YLDFTNPKV 44.319117 549.285144031048 241182.3125 8218.0 ENST00000567421.1_1_15:42570725-42619667:+|nuORF;;ENSG00000214013|ENST00000318010|GANC 4.519543965657552 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8226 44.321 99.0 847720.0 25 0 71845.0 + -1 ALDPASISV 9 96 872.9062721707613 1743.7979914083226 2 873.4091064333916 MULTI CID FTMS 0 0 0 8218 298004.84375 0.5661541835537495 1 -0.0424308776855468 8 2 Carbamidomethyl (C) _RWRC(Carbamidomethyl (C))DC(Carbamidomethyl (C))RWFRF_ ENSG00000043093|ENST00000292782|DCUN1D1 1.1933415558491238 0.8695176722560516 6 AD{I|L}SV[CS]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 13 -1 46.432 0.0 0.0 2.6627 0.0 0.0 369.2093983380875 0.0 369.2093983380875 0.0 16.729949843599776 0.0 0.0 0 0.5 0.0 1.174742501084005 0.4247425010840047 AD{I|L}SV[CS]N{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 2.6627 - 1692 1 1.514 61272.4 1.0 2739 5485 8218 SUDHL4_400M_050219_2,8226 SUDHL4_400M_050219_2,8226,RWRCDCRWFRF False False ALDPASISV 44.321277 873.409106433392 26092864.0 8218.0 ENSG00000043093|ENST00000292782|DCUN1D1 4.748217105865479 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8227 44.329 460.0 163930.0 25 0 10139.0 -1 0 95 958.7759395913516 2873.3059893742548 3 959.1110107302666 MULTI CID FTMS 0 0 0 8218 258429.140625 0.7837134434895425 1 -0.0424308776855468 9 6 D{[QD]|[EN]|[WG]|[KD]|[RS]} 3 -1 18.2 0.0 0.0 0.63341 0.0 0.0 2497.148369202582 0.0 2497.148369202582 0.0 1.1041593019970009 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 D{[QD]|[EN]|[WG]|[KD]|[RS]} 0.63341 - 571 1 1.514 59845.9 1.0 2740 5485 8218 SUDHL4_400M_050219_2,8227 SUDHL4_400M_050219_2,8227, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8229 44.336 134.0 437860.0 25 0 67669.0 28610 PVDTYNNIL 9 99 524.7690836284975 1047.5236143237948 2 524.7692748904228 MULTI CID FTMS 0 0 0 8228 392832.09375 0.4587828444942418 2 -0.0641899108886718 1 Unmodified _PVDTYNNIL_ ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF 23.1484247019978 0.2366544122328345 6 [DP]VYTQ 6 6 31.643 0.0 0.0 3.0208 0.0 0.0 0.0 341.1820975603761 341.1820975603761 13.858696646399904 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 [DP]VYTQ 3.0208 - 307 1 1.514 51952.6 1.0 2741 5486 8228 SUDHL4_400M_050219_2,8229 SUDHL4_400M_050219_2,8229,PVDTYNNIL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8230 44.34 237.0 286850.0 25 0 22365.0 + + 19785 GLKEGIPAL 9 104 449.2744819576453 896.5344109820907 2 449.2744933962822 MULTI CID FTMS 0 0 0 8228 249770.046875 0.994497604693672 1 -0.0560760498046875 2 Unmodified _LGSGLIGAPL_ ENSG00000167658|ENST00000309311|EEF2 48.345845343767074 0.089859443182303 6 QPA{I|L} 4 -1 30.918 0.0 0.0 3.4486 0.0 0.0 469.291348815349 0.0 469.291348815349 0.0 5.855931671512877 0.0 0.0 0 0.5 0.0 0.0 0.0 QPA{I|L} 3.4486 - 291 + 1 1.514 58157.3 1.0 2742 5486 8228 SUDHL4_400M_050219_2,8230 SUDHL4_400M_050219_2,8230,LGSGLIGAPL False False GLKEGIPAL 44.340477 449.274493396282 2890465.0 8228.0 ENSG00000167658|ENST00000309311|EEF2 3.646410862604777 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8231 44.347 334.0 318030.0 25 0 54069.0 30738 RGPASLVR 8 109 428.2617724454285 854.5089919576569 2 428.2618896365166 MULTI CID FTMS 0 0 0 8228 178936.40625 0.0656075433140761 -5 0.3151206970214844 3 Unmodified _RGPASLVR_ ENST00000497343.5_1_3:160473400-160474084:+|nuORF 0.6903765706972694 0.8201419426409876 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.514 90015.1 1.0 2743 5486 8228 SUDHL4_400M_050219_2,8231 SUDHL4_400M_050219_2,8231,RGPASLVR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8232 44.358 651.0 189020.0 25 0 30129.0 + 104 AAIHPSLEI 9 132 475.7688618429083 949.5231707526166 2 475.7689086794853 MULTI CID FTMS 0 0 0 8228 95129.1015625 0.1747852914987502 -6 0.3339996337890625 4 Unmodified _AAIHPSLEI_ ENSG00000141127|ENST00000268835|PRPSAP2;nc|ENSG00000141127|O60256-2|PRPSAP2;nc|ENSG00000141127|O60256-3|PRPSAP2;nc|ENSG00000141127|O60256-4|PRPSAP2 44.40701690623563 0.0526327925666318 6 [H{I|L}]AAPS{I|L}E{I|L} 9 4 + 56.314 0.0 0.0 5.9308 5.9308 84.787 0.0 0.0 0.0 6.434526764861879 16.478174818886373 6.434526764861879 6.434526764861879 0 0.6989700043360187 1.0 0.805462187404089 0.0 [H{I|L}]AAPS{I|L}E{I|L};[{I|L}A]HAPS{I|L}E{I|L};AA[H{I|L}]PS{I|L}E{I|L};{[VA]|[{I|L}G]}[YR]S{I|L}E{I|L};[H{I|L}]PQT{I|L}E{I|L};[H{I|L}]PAAS{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}QT{I|L}E{I|L};[H{I|L}]PK[DV]E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RV]S{I|L}E{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}AAS{I|L}E{I|L} 5.9308;5.2531;5.0387;4.5265;4.2606;3.7283;3.6078;3.55;3.2833;3.0756 -;-;+;-;-;-;-;-;-;- + 558 1 1.514 96858.4 1.0 2744 5486 8228 SUDHL4_400M_050219_2,8232 SUDHL4_400M_050219_2,8232,AAIHPSLEI True True AAIHPSLEI 44.357867 475.768908679485 5777165.5 8228.0 nc|ENSG00000141127|O60256-3|PRPSAP2;;nc|ENSG00000141127|O60256-2|PRPSAP2;;ENSG00000141127|ENST00000268835|PRPSAP2;;nc|ENSG00000141127|O60256-4|PRPSAP2 4.037252028783162 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8233 44.372 800.0 201390.0 25 0 38648.0 + 1489 ALGLVLTSV 9 146 436.7749079157141 0 436.7753173708916 PEAK CID FTMS 0 0 0 8228 92331.65625 0.0699733512261221 -6 0.3339996337890625 5 Unmodified _ALGLVLTSV_ REV__ENSG00000137204|ENST00000372585|SLC22A7;REV__nc|ENSG00000137204|Q9Y694-2|SLC22A7;REV__nc|ENSG00000137204|Q9Y694-3|SLC22A7 12.531546534597751 0.2832320739326029 6 S 1 -1 2.613 0.0 0.0 0.29982 0.0 0.0 667.4237954683438 114.05655847720936 781.4803539455531 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1643943297944484 0.0 S 0.29982 + + 13 + 1 1.514 129724.3 0.3899999856948852 2745 5486 8228 SUDHL4_400M_050219_2,8233 SUDHL4_400M_050219_2,8233,ALGLVLTSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8234 44.386 800.0 86324.0 25 0 24426.0 -1 0 76 964.4441837716624 2890.310721915187 3 965.1127197146416 MULTI CID FTMS 0 0 0 8228 127526.3359375 0.1017479771792509 6 -0.1793594360351562 6 6 [NP]T{[SA]|[TG]}D{[YC]|[HE]}{I|L} 9 -1 11.36 0.0 0.0 0.39305 0.0 0.0 0.0 1922.870642191438 1922.870642191438 5.162574822053546 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 [NP]T{[SA]|[TG]}D{[YC]|[HE]}{I|L} 0.39305 - 79 1 1.514 56984.1 0.5699999928474426 2746 5486 8228 SUDHL4_400M_050219_2,8234 SUDHL4_400M_050219_2,8234, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8236 44.391 48.0 870880.0 25 0 205260.0 29703 QPIKLFGMR 9 62 545.3165147194395 1088.618476505679 2 545.3168212771416 MULTI CID FTMS 0 0 0 8235 985460.5 0.778288551483176 3 -0.0689277648925781 1 Unmodified _QPIKLFGMR_ ENST00000596028.5_1_2:70310792-70315777:-|nuORF 4.3292370932331545 0.7635526921153418 6 H 1 9 2.7642 0.0 0.0 0.25392 0.0 0.0 863.5076804625133 85.0301989191039 948.5378793816172 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.25392 - 4 + 1 1.52 36159.4 1.0 2747 5487 8235 SUDHL4_400M_050219_2,8236 SUDHL4_400M_050219_2,8236,QPIKLFGMR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8237 44.394 147.0 409280.0 25 0 67991.0 20572 LLNLQATDR 9 77 522.2958238627225 1042.577094792245 2 522.2959472537041 MULTI CID FTMS 0 0 0 8235 323005.1875 0.4920535297656661 4 -0.1017646789550781 2 Unmodified _LLNLQATDR_ ENSG00000150275|ENST00000644397|PCDH15;nc|ENSG00000150275|Q96QU1-3|PCDH15;nc|ENSG00000150275|Q96QU1-4|PCDH15;nc|ENSG00000150275|Q96QU1-6|PCDH15;nc|ENSG00000150275|Q96QU1|PCDH15 4.3292370932331545 0.7635526921153418 6 {M(Oxidation (M))|F} 1 9 11.783 0.0 0.0 1.1302 0.0 0.0 877.4980522891184 0.0 877.4980522891184 0.0 2.691954557292924 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.1302 - 6 + 1 1.52 52276.8 1.0 2748 5487 8235 SUDHL4_400M_050219_2,8237 SUDHL4_400M_050219_2,8237,LLNLQATDR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8239 44.398 69.0 738510.0 25 0 51751.0 + 9576 FLIRESETL 9 78 554.3063008153409 1106.5980486974818 2 554.3062621951103 MULTI CID FTMS 0 0 0 8238 459868.75 1.0 0 0.0 1 Unmodified _FLIRESETL_ ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN 69.10491478415734 0.0214449631113747 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}R{[ES]|[DT]|[{I|L}C]}ET{I|L} 9 0 + 48.094 0.0 0.0 4.3461 4.3461 80.631 0.0 0.0 0.0 9.328986159752972 35.430599746173215 9.328986159752972 7.697953115119063 0 1.5172203223519531 0.0 0.7302046884880937 0.4247425010840047 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}R{[ES]|[DT]|[{I|L}C]}ET{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}R{[ES]|[DT]|[{I|L}C]}TE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}R[WM]E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[RH]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}R{[ES]|[DT]|[{I|L}C]}TNK;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}R[WM]NK 4.3461;3.6505;2.7493;2.0703;1.9036;1.0024 +;-;-;-;-;- + 115 1 1.52 44514.6 1.0 2749 5488 8238 SUDHL4_400M_050219_2,8239 SUDHL4_400M_050219_2,8239,FLIRESETL True True FLIRESETL 44.398431 554.30626219511 4843227.5 8238.0 nc|ENSG00000254087|P07948-2|LYN;;ENSG00000254087|ENST00000519728|LYN 5.770455360412598 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8240 44.403 218.0 368210.0 25 0 47442.0 + + 41049 MVIVPTREL 9 73 529.3075969921977 1056.6006410511952 2 529.3075439333916 MULTI CID FTMS 0 0 0 8238 248993.234375 1.0 0 0.0 2 Unmodified _VMIVVAQGLQ_ ENSG00000110367|ENST00000534980|DDX6 26.88365393820708 0.3646707531412818 6 [{I|L}V]M{[SA]|[TG]}{I|L}V{I|L} 8 -1 42.546 0.0 0.0 4.0267 0.0 0.0 0.0 227.0856270731489 227.0856270731489 37.941745709535 0.0 0.0 0.0 0 0.805462187404089 1.5228787452803376 0.2887254899964357 0.0 [{I|L}V]M{[SA]|[TG]}{I|L}V{I|L} 4.0267 - 92 1 1.52 67718.5 1.0 2750 5488 8238 SUDHL4_400M_050219_2,8240 SUDHL4_400M_050219_2,8240,VMIVVAQGLQ False False MVIVPTREL 44.40257 529.307543933392 958058.4375 8238.0 ENSG00000110367|ENST00000534980|DDX6 -0.3443714777628581 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8241 44.408 314.0 102860.0 25 0 8406.1 + 26514 NVIAQFLGGL 10 66 516.2959239148704 1030.5772948965407 2 516.2959472537041 MULTI CID FTMS 0 0 0 8238 157778.75 0.7210667729979708 -8 0.3981895446777344 3 Unmodified _NVIAQFLGGL_ REV__ENSG00000132613|ENST00000338779|MTSS2;REV__nc|ENSG00000132613|Q765P7-2|MTSS2 3.944395688203298 0.708391353636983 6 {M(Oxidation (M))|F} 1 -1 10.596 0.0 0.0 1.0282 0.0 0.0 865.4971232430236 0.0 865.4971232430236 0.0 0.2173284689054533 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0282 + + 29 + 1 1.52 32757.0 1.0 2751 5488 8238 SUDHL4_400M_050219_2,8241 SUDHL4_400M_050219_2,8241,NVIAQFLGGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8242 44.415 364.0 158170.0 25 0 10547.0 + 29647 QNFQSLIQS 9 108 532.7718907074599 1063.5292284817197 2 533.2714111208916 MULTI CID FTMS 0 0 0 8238 95642.5703125 0.7332138645873411 -9 0.447845458984375 4 Unmodified _QNFQSLIQS_ REV__ENSG00000143971|ENST00000272342|ETAA1 7.910154910731844 0.6385446671287552 6 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 3 -1 16.84 0.0 0.0 1.5834 0.0 0.0 0.0 671.3357830073634 671.3357830073634 6.461076257560613 0.0 0.0 0.0 0 0.0 0.0 0.0 0.6382104921644451 {[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F} 1.5834 + + 178 1 1.52 49568.2 1.0 2752 5488 8238 SUDHL4_400M_050219_2,8242 SUDHL4_400M_050219_2,8242,QNFQSLIQS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8243 44.416 27.0 1516600.0 25 0 242810.0 + 1653 ALNEKLVNL 9 64 507.3029840006608 0 507.3030273318291 PEAK CID FTMS 0 0 0 8238 1407344.75 0.9141257837808564 1 -0.0224113464355468 5 Unmodified _ALNEKLVNL_ ENSG00000175390|ENST00000651655|EIF3F 25.399314129420983 0.152124705672316 6 DV{I|L}K 4 8 13.532 0.0 0.0 1.3364 0.0 0.0 314.2266212222217 240.06295190982652 554.2895731320483 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 DV{I|L}K 1.3364 - 108 + 1 1.52 38440.1 1.0 2753 5488 8238 SUDHL4_400M_050219_2,8243 SUDHL4_400M_050219_2,8243,ALNEKLVNL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8245 44.427 459.0 198620.0 25 0 36403.0 + -1 RLWDLTTGTTT 11 91 633.3396071544448 632.3323306878448 1 633.3404418826103 MULTI CID FTMS 0 0 0 8244 90089.6015625 0.6748540674997507 -1 0.0224113464355468 1 ENST00000514183.5_1_5:180665952-180670713:-|nuORF;ENSG00000204628|ENST00000512805|RACK1;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF 6 TT 2 -1 15.219 0.0 0.0 2.4069 0.0 0.0 412.2262343517104 0.0 412.2262343517104 0.0 0.5267534721013973 0.0 0.0 0 0.0 0.0 0.5297966019298022 0.0 TT 2.4069 - 55 + 1 1.52 72676.0 1.0 2754 5489 8244 SUDHL4_400M_050219_2,8245 SUDHL4_400M_050219_2,8245, False False RLWDLTTGTTT 44.426745 633.34044188261 487674.5 8244.0 ENST00000514183.5_1_5:180665952-180670713:-|nuORF;;ENSG00000204628|ENST00000512805|RACK1;;ENST00000502548.5_1_5:180666387-180669331:-|nuORF;;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;;ENST00000505461.5_1_5:180668319-180670896:-|nuORF 4.584372520446777 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8246 44.441 800.0 224460.0 25 0 10743.0 -1 0 139 857.9286056945348 1713.8426584558697 2 857.9322387576103 MULTI CID FTMS 0 0 0 8244 117101.5859375 0.2444376542391668 -6 0.3345909118652344 2 6 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 15 -1 + 125.43 0.0 0.0 7.3184 7.3184 86.088 0.0 0.0 0.0 59.46878640120366 6.038398967110723 6.038398967110723 3.4948500216800937 0 1.774227503252014 2.0 2.173877368056628 2.115356566548286 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[RV]DA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAD[DV]RA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NWQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NP{I|L}NADQ{[QN]|[E{I|L}]|[KN]}A{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW[RV]DA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NP{I|L}NAD[RV]DA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NW[DV]RA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}NP{I|L}NAD[DV]RA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NAT{NN|[MP]|[D{I|L}]|[EV]}RA{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 7.3184;7.1145;6.8823;6.6802;6.6471;6.4763;6.4432;6.2441;6.211;6.0923 -;-;-;-;-;-;-;-;-;- 28398 + 1 1.52 122743.5 0.5899999737739563 2755 5489 8244 SUDHL4_400M_050219_2,8246 SUDHL4_400M_050219_2,8246, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8247 44.454 800.0 174310.0 25 0 17871.0 + 44439 YMIDPSGVSY 10 133 574.2517582674502 1146.4889636017003 2 574.2526122927666 MULTI CID FTMS 0 0 0 8244 114066.4921875 0.2990469624937776 -3 0.0866012573242187 3 Oxidation (M) _YM(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 68.08070601005525 0.0189984391031388 6 [PS]GVY{M(Oxidation (M))|F}EVSY 10 7 + 52.671 0.0 0.0 4.5941 4.5941 73.314 0.0 0.0 0.0 0.4402281476392033 12.35786703427972 0.4402281476392033 0.4402281476392033 0 0.5 0.8860566476931632 0.6237125054200234 0.0 [PS]GVY{M(Oxidation (M))|F}EVSY;[VG]SPY{M(Oxidation (M))|F}EVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DK{M(Oxidation (M))|F}EVSY;[VS]GPY{M(Oxidation (M))|F}EVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DY[PS]GVSY;[VG]SYP{M(Oxidation (M))|F}EVSY;[VS]GYP{M(Oxidation (M))|F}EVSY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}YD[PS]GVSY;{[QD]|[EN]|[WG]|[KD]|[RS]}PY{M(Oxidation (M))|F}EVSY;[Y{M(Oxidation (M))|F}]{I|L}D[PS]GVSY 4.5941;4.5557;4.5354;4.5009;4.4766;4.4094;4.3546;4.323;4.2166;4.1539 -;-;-;-;-;-;-;-;-;+ + 2597 1 1.52 108540.2 0.5199999809265137 2756 5489 8244 SUDHL4_400M_050219_2,8247 SUDHL4_400M_050219_2,8247,YMIDPSGVSY True False YMIDPSGVSY 44.454441 574.252612292767 3863201.0 8244.0 ENSG00000100567|ENST00000216455|PSMA3;;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;;nc|ENSG00000100567|P25788-2|PSMA3 5.069539308547974 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8249 44.471 800.0 162570.0 25 0 29431.0 + 19526 LFNLTESIKL 10 132 589.3425237759607 1176.6704946187212 2 589.3434326052666 MULTI CID FTMS 0 0 0 8248 210065.125 0.3489046389411536 -9 0.44012451171875 1 Unmodified _LFNLTESIKL_ REV__ENST00000358356.9_1_21:36260194-36260230:-|nuORF 6.2057823575117 0.6979311171683138 6 {I|L} 1 -1 8.7236 0.0 0.0 0.74138 0.0 0.0 1045.5753235755556 0.0 1045.5753235755556 0.0 4.744237387763093 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.74138 + + 71 + 1 1.52 99628.0 0.550000011920929 2757 5490 8248 SUDHL4_400M_050219_2,8249 SUDHL4_400M_050219_2,8249,LFNLTESIKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8250 44.476 271.0 372930.0 25 0 65902.0 + 45326 YSLDHISSL 9 115 517.7610807866442 1033.5076086400884 2 517.7612182497978 MULTI CID FTMS 0 0 0 8248 195251.34375 0.1818578749739207 -5 0.1674346923828125 2 Unmodified _YSLDHISSL_ ENSG00000030066|ENST00000378460|NUP160;ENST00000527126.1_1_11:47843172-47843701:-|nuORF;nc|ENSG00000030066|Q12769-3|NUP160;nc|ENSG00000030066|Q12769|NUP160 68.08070601005525 0.0218408846571049 6 SS{I|L}S{M(Oxidation (M))|F}S{I|L} 7 5 64.161 0.0 0.0 6.2081 0.0 0.0 294.1583177238759 0.0 294.1583177238759 0.0 13.996294548824366 0.0 0.0 0 0.4247425010840047 0.0 2.071333751784365 0.0 SS{I|L}S{M(Oxidation (M))|F}S{I|L} 6.2081 - 1278 + 1 1.52 80299.9 1.0 2758 5490 8248 SUDHL4_400M_050219_2,8250 SUDHL4_400M_050219_2,8250,YSLDHISSL True True YSLDHISSL 44.475845 517.761218249798 4856185.0 8248.0 ENST00000527126.1_1_11:47843172-47843701:-|nuORF;;nc|ENSG00000030066|Q12769-3|NUP160;;nc|ENSG00000030066|Q12769|NUP160;;ENSG00000030066|ENST00000378460|NUP160 7.469285806020101 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8251 44.487 654.0 189980.0 25 0 19809.0 + 34760 SQANIAQVL 9 134 472.2637688020451 942.5129846708902 2 472.2633239626884 MULTI CID FTMS 0 0 0 8248 132523.875 0.618174736426585 -5 0.1674346923828125 3 Unmodified _SQANIAQVL_ ENSG00000006125|ENST00000610402|AP2B1;ENSG00000100280|ENST00000357586|AP1B1;ENST00000441188.2_1_X:92478653-92479352:-|nuORF;nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;nc|ENSG00000100280|Q10567-2|AP1B1;nc|ENSG00000100280|Q10567-3|AP1B1;nc|ENSG00000100280|Q10567-4|AP1B1 60.07390631473393 0.0260411565414776 6 [AG]SAN{I|L}AQ[{I|L}V] 10 3 + 61.213 0.0 0.0 6.4947 6.4947 83.233 0.0 0.0 0.0 3.001299747361984 7.269987279362624 3.001299747361984 3.001299747361984 0 0.0 1.154901959985743 0.809894379144197 1.579689690656103 [AG]SAN{I|L}AQ[{I|L}V];{[QS]|[NT]}AN{I|L}AQ[{I|L}V];[AG]ASN{I|L}AQ[{I|L}V];[QA]SN{I|L}AQ[{I|L}V];[AG]GTN{I|L}AQ[{I|L}V];[AG]SAN{I|L}A[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}ASQAQ[{I|L}V];{[QG]|[NA]}TN{I|L}AQ[{I|L}V];{[QS]|[NT]}AGG{I|L}AQ[{I|L}V];{[QS]|[NT]}AN{I|L}A[AG][{I|L}V] 6.4947;6.1762;6.1434;5.8739;5.6915;5.5223;5.5142;5.2179;5.1992;5.1992 -;+;-;-;-;-;-;-;-;- + 1076 1 1.52 99405.3 1.0 2759 5490 8248 SUDHL4_400M_050219_2,8251 SUDHL4_400M_050219_2,8251,SQANIAQVL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8253 44.504 800.0 139000.0 25 0 33255.0 -1 0 74 1178.1495996284907 3531.426969485672 3 1178.484545886517 MULTI CID FTMS 0 0 0 8252 219879.609375 0.4430722639113809 6 -0.1704902648925781 1 6 G{[YC]|[HE]}T{M(Oxidation (M))|F}TV 7 -1 14.028 0.0 0.0 0.39724 0.0 0.0 2147.7552165880443 609.3008010953245 2757.0560176833687 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 G{[YC]|[HE]}T{M(Oxidation (M))|F}TV 0.39724 - 250 + 1 1.52 93191.8 0.7699999809265137 2760 5491 8252 SUDHL4_400M_050219_2,8253 SUDHL4_400M_050219_2,8253, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8254 44.509 276.0 137320.0 25 0 13569.0 -1 LVMWKVRQ 8 79 538.3088172384545 1074.6030815437089 2 538.3085815310478 MULTI CID FTMS 0 0 0 8252 208508.890625 0.4106521089151652 8 -0.267120361328125 2 Oxidation (M) _LVM(Oxidation (M))WKVRQ_ nc|ENSG00000205176|Q8IX06|REXO1L1P 6.354104778181461 0.7857632046190106 6 [{I|L}V]N 3 -1 14.639 0.0 0.0 1.3623 0.0 0.0 0.0 745.3862596045088 745.3862596045088 10.034693515935096 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}V]N 1.3623 - 37 1 1.52 32634.8 1.0 2761 5491 8252 SUDHL4_400M_050219_2,8254 SUDHL4_400M_050219_2,8254,LVMWKVRQ False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 8256 44.514 40.0 1322400.0 25 0 190260.0 + 13258 HIIENIVAV 9 61 504.2977804640929 1006.5810079949858 2 504.2979614138603 MULTI CID FTMS 0 0 0 8255 1295435.5 0.4186310599802469 4 -0.1081695556640625 1 Unmodified _HIIENIVAV_ ENSG00000171490|ENST00000571133|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1 34.10243960390752 0.1078313939113124 6 [H{I|L}]{I|L}EN{I|L} 6 3 47.452 0.0 0.0 4.7142 0.0 0.0 0.0 284.1615614192809 284.1615614192809 26.817496819840656 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.3807196863200844 + [H{I|L}]{I|L}EN{I|L} 4.7142 + + 83 1 1.52 47551.1 1.0 2762 5492 8255 SUDHL4_400M_050219_2,8256 SUDHL4_400M_050219_2,8256,HIIENIVAV True True HIIENIVAV 44.513599 504.29796141386 32894874.0 8255.0 ENSG00000171490|ENST00000571133|RSL1D1;;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;;nc|ENSG00000171490|O76021-2|RSL1D1;;ENST00000574823.5_1_16:11935494-11935832:-|nuORF 6.38357416788737 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8257 44.518 254.0 163010.0 25 0 11540.0 41104 VNLPKEVHI 9 78 524.8089663919778 1047.6033798507556 2 524.8091918826103 MULTI CID FTMS 0 0 0 8255 149587.234375 0.9621688556274808 -1 0.0215187072753906 2 Unmodified _VNLPKEVHI_ ENSG00000204186|ENST00000374423|ZDBF2 7.910154910731844 0.6385446671287552 6 {I|L} 1 8 11.99 0.0 0.0 1.1445 0.0 0.0 916.5083766542696 0.0 916.5083766542696 0.0 0.8804562952784067 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1445 + + 78 + 1 1.52 37923.7 1.0 2763 5492 8255 SUDHL4_400M_050219_2,8257 SUDHL4_400M_050219_2,8257,VNLPKEVHI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8258 44.521 120.0 438080.0 25 0 53090.0 + 9594 FLKSNEKKI 9 87 553.830663241412 1105.646773549624 2 553.8304931521416 MULTI CID FTMS 0 0 0 8255 299199.8125 0.593973593643615 8 -0.2866020202636719 3 Unmodified _FLKSNEKKI_ REV__ENSG00000198625|ENST00000367182|MDM4;REV__nc|ENSG00000198625|O15151-4|MDM4;REV__nc|ENSG00000198625|O15151-5|MDM4 12.531546534597751 0.4974689918368763 6 ET 2 -1 15.261 0.0 0.0 1.3803 0.0 0.0 130.16210665684895 742.3909395807249 872.5530462375739 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8807196863200843 0.0 ET 1.3803 - 128 + 1 1.52 46532.3 1.0 2764 5492 8255 SUDHL4_400M_050219_2,8258 SUDHL4_400M_050219_2,8258,FLKSNEKKI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8259 44.535 800.0 181430.0 25 0 15593.0 7284 EEVAVEDNS 9 165 496.2145998835568 990.4146468339136 2 496.2151367068291 MULTI CID FTMS 0 0 0 8255 88588.5859375 0.6938515903222253 -3 0.0927581787109375 4 Unmodified _EEVAVEDNS_ ENSG00000075539|ENST00000358350|FRYL 11.640296217721598 0.521594087909532 6 [{I|L}V]ADE{I|L} 6 6 28.72 0.0 0.0 2.8998 0.0 0.0 0.0 347.0515236251824 347.0515236251824 11.172650224445904 0.0 0.0 0.0 0 0.2742275032520141 2.0 0.25 0.0 [{I|L}V]ADE{I|L} 2.8998 - 743 1 1.52 110689.5 0.4399999976158142 2765 5492 8255 SUDHL4_400M_050219_2,8259 SUDHL4_400M_050219_2,8259,EEVAVEDNS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8261 44.551 800.0 130260.0 25 0 14621.0 + 41438 VPLILADA 8 130 406.2485091000349 810.4824652668699 2 406.2476379275322 MULTI CID FTMS 0 0 0 8260 61676.76953125 0.0148040454343941 33 -1.0846176147460938 1 Unmodified _VPLILADA_ REV__ENSG00000178971|ENST00000651323|CTC1;REV__ENST00000578240.1_1_17:8133610-8135926:-|nuORF;REV__nc|ENSG00000178971|Q2NKJ3-2|CTC1 0.6903765706972694 0.8201419426409876 6 {I|L} 1 -1 9.9148 0.0 0.0 1.2233 0.0 0.0 679.3874162940168 0.0 679.3874162940168 0.0 0.7066457639823476 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2233 + + 23 + 1 1.52 84165.9 0.7200000286102295 2766 5493 8260 SUDHL4_400M_050219_2,8261 SUDHL4_400M_050219_2,8261,VPLILADA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8262 44.556 242.0 256440.0 25 0 27708.0 35935 SVPELLAP 8 89 413.2381377651415 824.461722597083 2 413.2384521365166 MULTI CID FTMS 0 0 0 8260 197991.9375 0.7611610870341934 -3 0.0801925659179687 2 Unmodified _SVPELLAP_ ENSG00000070476|ENST00000389709|ZXDC;nc|ENSG00000070476|Q2QGD7-2|ZXDC;nc|ENSG00000070476|Q2QGD7-3|ZXDC 9.347437153973935 0.7675937258251505 6 E 1 7 12.346 0.0 0.0 1.4975 0.0 0.0 412.260399012396 280.1262301080688 692.3866291204647 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.0 + E 1.4975 + + 16 + 1 1.52 54798.3 1.0 2767 5493 8260 SUDHL4_400M_050219_2,8262 SUDHL4_400M_050219_2,8262,SVPELLAP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8263 44.569 800.0 107010.0 25 0 16750.0 31656 RRGLNGTKPVP 11 107 597.8561619774339 1193.6977710216677 2 597.8558837771416 MULTI CID FTMS 0 0 0 8260 93290.9921875 0.4169877381392123 -4 0.1185951232910156 3 Unmodified _RRGLNGTKPVP_ ENSG00000198718|ENST00000361462|TOGARAM1;ENST00000555607.1_1_14:45431624-45475488:+|nuORF;nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1;nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1;nc|ENSG00000198718|Q9Y4F4|TOGARAM1 2.735195868890462 0.8622431031272658 6 {I|L} 1 10 9.2082 0.0 0.0 0.7714 0.0 0.0 1062.6028136015489 0.0 1062.6028136015489 0.0 0.4357508785945008 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.7714 + + 27 + 1 1.52 70029.9 0.4799999892711639 2768 5493 8260 SUDHL4_400M_050219_2,8263 SUDHL4_400M_050219_2,8263,RRGLNGTKPVP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8265 44.574 29.0 1351000.0 25 0 403330.0 + 18848 LASPHSPIL 9 57 467.77162695849336 933.5287009837868 2 467.7716247439384 MULTI CID FTMS 0 0 0 8264 1734470.375 0.2076445972425116 7 -0.2906608581542969 1 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 44.40701690623563 0.0526327925666318 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 9 3 + 45.123 0.0 0.0 4.8336 4.8336 80.89 0.0 0.0 0.0 5.642492736872597 37.164537177296495 5.642492736872597 6.131382658072312 0 0.9247425010840048 0.0 1.274227503252014 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};[{I|L}A][PS]H[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA][PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[PG]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[R{M(Oxidation (M))|F}][{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[PS][TA]{I|L}{I|L};[R{M(Oxidation (M))|F}][{I|L}T][TA]{I|L}{I|L};[{I|L}A][W{M(Oxidation (M))|F}][TA]{I|L}{I|L} 4.8336;4.1768;3.8477;3.7337;3.0703;2.9072;2.9072;2.7478;2.5848;2.3962 -;+;-;-;-;-;-;-;-;- + 105 1 1.52 38214.5 1.0 2769 5494 8264 SUDHL4_400M_050219_2,8265 SUDHL4_400M_050219_2,8265,LASPHSPIL True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8266 44.577 158.0 345560.0 25 0 30151.0 38699 TTPVKITLT 9 89 487.3000690738352 972.5855852144704 2 487.3002807497978 MULTI CID FTMS 0 0 0 8264 276188.09375 0.134344402246523 7 -0.2906608581542969 2 Unmodified _TTPVKITLT_ ENSG00000139970|ENST00000267484|RTN1 36.12702656103203 0.0967173616627612 6 {[DS]|[MA]|[CV]|TT}PK{I|L}VTT{I|L} 9 4 + 44.152 0.0 0.0 4.5396 4.5396 74.446 0.0 0.0 0.0 2.243012119929091 20.85113951948989 2.243012119929091 1.249387366082999 0 0.8182503180159344 0.0 0.7887254899964358 0.0 {[DS]|[MA]|[CV]|TT}PK{I|L}VTT{I|L};{[DS]|[MA]|[CV]|TT}P{I|L}KVTT{I|L};[{I|L}T]G[VG]{I|L}VTT{I|L};[{I|L}T][TP]KVTT{I|L};[PS]{I|L}T[K{I|L}]TT{I|L};{[DS]|[MA]|[CV]|TT}PV[K{I|L}]TT{I|L};[{I|L}T][PS][K{I|L}]TT{I|L};[PS]{I|L}TT[K{I|L}]T{I|L};[{I|L}T]G[K{I|L}]VET{I|L};{[DS]|[MA]|[CV]|TT}PVT[K{I|L}]T{I|L} 4.5396;4.4112;4.0435;3.9621;3.7122;3.4118;2.9627;2.7311;2.4822;2.4307 -;-;-;-;-;-;-;-;-;- 462 1 1.52 47451.1 1.0 2770 5494 8264 SUDHL4_400M_050219_2,8266 SUDHL4_400M_050219_2,8266,TTPVKITLT True False KLGEIVTTI 44.57729 487.300280749798 19422676.0 8264.0 ENST00000483848.5_1_3:57563094-57582900:-|nuORF;;ENST00000463733.5_1_7:127228552-127229672:+|nuORF;;ENST00000493378.1_1_3:57569737-57582900:-|nuORF;;ENST00000397387.2_1_13:101408869-101409262:-|nuORF;;ENSG00000143761|ENST00000272102|ARF1;;nc|ENSG00000134287|P61204-2|ARF3;;ENST00000605447.1_1_9:136944076-136944538:+|nuORF;;ENSG00000004059|ENST00000000233|ARF5;;ENSG00000134287|ENST00000256682|ARF3;;ENST00000470670.5_1_1:228270461-228285316:+|nuORF;;ENSG00000168374|ENST00000303436|ARF4 2.5579841136932373 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8267 44.58 135.0 381040.0 25 0 32495.0 + 12115 GQIEVVPEV 9 89 485.2660242716376 968.5174956100752 2 485.2662536501884 MULTI CID FTMS 0 0 0 8264 369049.5 0.803261970640387 -3 0.0820579528808593 3 Unmodified _GQIEVVPEV_ ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3 49.93300154707207 0.0405168250806675 6 [EP]VGVV 6 6 26.655 0.0 0.0 2.7522 0.0 0.0 0.0 385.1720725966565 385.1720725966565 -0.339322000954283 0.0 -0.339322000954283 0.0 0 0.0 1.5228787452803376 0.0 0.0 [EP]VGVV 2.7522 - 202 1 1.52 43123.2 1.0 2771 5494 8264 SUDHL4_400M_050219_2,8267 SUDHL4_400M_050219_2,8267,GQIEVVPEV True True GQIEVVPEV 44.580019 485.266253650188 6253360.0 8264.0 ENSG00000118482|ENST00000262043|PHF3;;nc|ENSG00000118482|Q92576-2|PHF3 5.896401246388753 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8268 44.583 127.0 350510.0 25 0 46202.0 + 17905 KQSRDGLPV 9 66 500.2831885975156 0 500.2831603884697 PEAK CID FTMS 0 0 0 8264 286579.5 0.7273303507419876 4 -0.1361465454101562 4 Unmodified _KQSRDGLPV_ REV__ENST00000271375.6_1_1:168213838-168214108:+|nuORF 3.944395688203298 0.3444685223463734 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 38372.9 1.0 2772 5494 8264 SUDHL4_400M_050219_2,8268 SUDHL4_400M_050219_2,8268,KQSRDGLPV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8269 44.584 72.0 491020.0 25 0 69326.0 + -1 AIYLCYLV 8 74 507.76837148317816 1013.5221900331564 2 507.7680541872978 MULTI CID FTMS 0 0 0 8264 223541.03125 1.0 0 0.0 5 Carbamidomethyl (C) _AIYLC(Carbamidomethyl (C))YLV_ REV__ENSG00000102383|ENST00000373367|ZDHHC15;REV__nc|ENSG00000102383|Q96MV8-3|ZDHHC15 17.086550045450526 0.6584923310065985 6 [{I|L}T][RH]E{M(Oxidation (M))|F}{I|L}V 8 -1 + 30.028 0.0 0.0 2.9627 2.9627 73.332 0.0 0.0 0.0 1.8842499412940583 16.04811556341673 1.8842499412940583 3.3437943901727465 0 0.5924778212679485 1.6989700043360187 0.0 0.0 [{I|L}T][RH]E{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[HS]A{I|L}{M(Oxidation (M))|F}{I|L}V;[{I|L}T][RH][DP]Y{I|L};{NN|[MP]|[D{I|L}]|[EV]}[HS]A[VP]Y{I|L} 2.9627;2.6328;0.99058;0.66066 -;-;-;- 60 1 1.52 33376.8 1.0 2773 5494 8264 SUDHL4_400M_050219_2,8269 SUDHL4_400M_050219_2,8269,AIYLCYLV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8270 44.598 794.0 126160.0 25 0 13557.0 42062 VQVLVLDG 8 135 421.7512300509723 0 421.7515746951103 PEAK CID FTMS 0 0 0 8264 158572.75 1.0 0 0.0 6 Unmodified _VQVLVLDG_ ENSG00000142541|ENST00000391857|RPL13A;ENST00000472481.5_1_19:49990877-49994169:+|nuORF;ENST00000479992.5_1_19:49990877-49993604:+|nuORF 4.75600775471527 0.5825752635465162 6 T 1 8 6.9897 0.0 0.0 0.83064 0.0 0.0 319.23090140878213 418.1894014947876 737.4203029035697 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.83064 - 7 + 1 1.52 82545.6 1.0 2774 5494 8264 SUDHL4_400M_050219_2,8270 SUDHL4_400M_050219_2,8270,VQVLVLDG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8272 44.603 29.0 1648700.0 25 0 382630.0 + -1 LLAPISIS 8 69 428.2617724454285 854.5089919576569 2 428.2616454958916 MULTI CID FTMS 0 0 0 8271 2185039.0 0.8011507766349005 4 -0.156402587890625 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))LLAPISIS_ REV__ENST00000566423.5_1_15:52842236-52842272:-|nuORF 0.6903765706972694 0.8201419426409876 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.52 44873.5 1.0 2775 5495 8271 SUDHL4_400M_050219_2,8272 SUDHL4_400M_050219_2,8272,LLAPISIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8273 44.606 154.0 330820.0 25 0 52299.0 + 105 AAIHPSLEI 9 76 475.7688618429083 949.5231707526166 2 475.7689697146416 MULTI CID FTMS 0 0 0 8271 340066.46875 0.6248205427480896 3 -0.1074867248535156 2 Unmodified _AAIHPSLEI_ ENSG00000141127|ENST00000268835|PRPSAP2;nc|ENSG00000141127|O60256-2|PRPSAP2;nc|ENSG00000141127|O60256-3|PRPSAP2;nc|ENSG00000141127|O60256-4|PRPSAP2 30.22481116460888 0.1466181017706357 6 T{I|L}E{I|L} 4 6 40.037 0.0 0.0 4.2166 0.0 0.0 475.2614002912125 0.0 475.2614002912125 0.0 33.047444008242906 0.0 0.0 0 0.4247425010840047 0.0 0.9247425010840048 0.0 T{I|L}E{I|L} 4.2166 - 86 1 1.52 47488.4 1.0 2776 5495 8271 SUDHL4_400M_050219_2,8273 SUDHL4_400M_050219_2,8273,AAIHPSLEI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8274 44.607 35.0 2103000.0 25 0 227430.0 + 9612 FLLDKKIGV 9 84 516.8258286262371 1031.6371043192742 2 516.8264037966728 MULTI CID FTMS 0 0 0 8271 1198631.625 0.4376488278479125 -2 0.0633621215820312 3 Unmodified _FLLDKKIGV_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 29.081581746732265 0.1611639662936252 6 KD{I|L}{I|L}E 5 7 46.013 0.0 0.0 4.4602 0.0 0.0 415.2789784162125 0.0 415.2789784162125 0.0 11.450659168749269 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 KD{I|L}{I|L}E 4.4602 - 396 1 1.52 62512.4 1.0 2777 5495 8271 SUDHL4_400M_050219_2,8274 SUDHL4_400M_050219_2,8274,FLLDKKIGV False True FLLDKKIGV 44.607025 516.826403796673 24205034.0 8271.0 nc|ENSG00000166226|P78371-2|CCT2;;ENSG00000166226|ENST00000299300|CCT2 5.673147360483806 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8275 44.611 229.0 182520.0 25 0 12655.0 + 11761 GLKEGIPAL 9 73 449.2744819576453 896.5344109820907 2 449.2754699587822 MULTI CID FTMS 0 0 0 8271 147328.125 0.5866094403619023 10 -0.3897895812988281 4 Unmodified _GLKEGIPAL_ ENSG00000167658|ENST00000309311|EEF2 36.12702656103203 0.0967173616627612 6 VG{I|L} 3 7 32.039 0.0 0.0 3.5737 0.0 0.0 609.3495487768157 0.0 609.3495487768157 0.0 22.034021960761265 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 VG{I|L} 3.5737 - 69 + 1 1.52 38682.4 1.0 2778 5495 8271 SUDHL4_400M_050219_2,8275 SUDHL4_400M_050219_2,8275,GLKEGIPAL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8276 44.617 309.0 241210.0 25 0 33525.0 + 1411 ALDDSRFQI 9 95 532.7718907074599 1063.5292284817197 2 532.7732421755791 MULTI CID FTMS 0 0 0 8271 131541.109375 0.908580041596421 -1 0.0286598205566406 5 Unmodified _ALDDSRFQI_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;ENST00000460912.6_1_6:152443573-152489284:-|nuORF;ENST00000478916.5_1_6:152456172-152464916:-|nuORF;nc|ENSG00000131018|Q8NF91-11|SYNE1;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-3|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1;nc|ENSG00000131018|Q8NF91-9|SYNE1 43.85829265575387 0.0542763391141878 6 [{I|L}A]DDS 5 4 50.585 0.0 0.0 4.7564 0.0 0.0 0.0 559.2980440729124 559.2980440729124 38.11120610332473 0.0 0.0 0.0 0 0.805462187404089 2.0 0.3807196863200844 0.0 + [{I|L}A]DDS 4.7564 + + 229 + 1 1.52 63085.3 1.0 2779 5495 8271 SUDHL4_400M_050219_2,8276 SUDHL4_400M_050219_2,8276,ALDDSRFQI True True ALDDSRFQI 44.61698 532.773242175579 666318.3125 8271.0 nc|ENSG00000131018|Q8NF91-9|SYNE1;;nc|ENSG00000131018|Q8NF91-2|SYNE1;;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;;nc|ENSG00000131018|Q8NF91-3|SYNE1;;nc|ENSG00000131018|Q8NF91-4|SYNE1;;nc|ENSG00000131018|Q8NF91-11|SYNE1;;ENST00000460912.6_1_6:152443573-152489284:-|nuORF;;ENSG00000131018|ENST00000367255|SYNE1;;nc|ENSG00000131018|Q8NF91-8|SYNE1;;ENST00000478916.5_1_6:152456172-152464916:-|nuORF 3.736193021138509 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8278 44.622 60.0 669890.0 25 0 143840.0 42102 VRKSLGRG 8 58 436.7749079157141 0 436.7749206423759 PEAK CID FTMS 0 0 0 8277 910617.625 0.6901096492225238 4 -0.1784324645996093 1 Unmodified _VRKSLGRG_ ENSG00000156983|ENST00000383829|BRPF1;nc|ENSG00000156983|P55201-3|BRPF1;nc|ENSG00000156983|P55201-4|BRPF1;nc|ENSG00000156983|P55201|BRPF1 0.0 0.6010389664953673 6 P 1 8 0.48455 0.0 0.0 0.055597 0.0 0.0 651.4038980074063 120.05079828433828 771.4546962917445 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.055597 - 1 + 1 1.52 37869.0 1.0 2780 5496 8277 SUDHL4_400M_050219_2,8278 SUDHL4_400M_050219_2,8278,VRKSLGRG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8279 44.63 470.0 225080.0 25 0 30789.0 + 42995 VVVDPIQSV 9 124 478.2764653182795 954.5383777033592 2 478.2775146365166 MULTI CID FTMS 0 0 0 8277 78209.7421875 0.119684760514917 9 -0.370819091796875 2 Unmodified _VVVDPIQSV_ ENSG00000115233|ENST00000409682|PSMD14 52.268347100219714 0.0353964759249114 6 VVDVP{I|L} 6 5 30.754 0.0 0.0 3.2219 0.0 0.0 0.0 329.14583554931534 329.14583554931534 12.535670587127306 0.0 0.0 0.0 0 0.6139829889124311 1.6989700043360187 0.0 0.0 VVDVP{I|L} 3.2219 - 276 1 1.52 84906.1 1.0 2781 5496 8277 SUDHL4_400M_050219_2,8279 SUDHL4_400M_050219_2,8279,VVVDPIQSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8280 44.644 800.0 40830.0 25 0 6153.0 -1 0 50 964.4441837716624 2890.310721915187 3 965.1096069216728 MULTI CID FTMS 0 0 0 8277 88057.640625 0.0702575412592601 16 -0.5839958190917969 3 6 NY 2 -1 7.9588 0.0 0.0 0.27536 0.0 0.0 2174.0031790458497 436.18515955142817 2610.188338597278 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NY 0.27536 - 57 + 1 1.52 33023.8 0.4699999988079071 2782 5496 8277 SUDHL4_400M_050219_2,8280 SUDHL4_400M_050219_2,8280, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8281 44.658 800.0 81246.0 25 0 14014.0 -1 0 69 973.1158288637112 2916.325657191333 3 973.4518310427666 MULTI CID FTMS 0 0 0 8277 73339.7265625 0.9808723576614796 -2 0.0476303100585937 4 6 T 1 -1 5.4846 0.0 0.0 0.18806 0.0 0.0 1758.7948477204334 1053.4823702447875 2812.277217965221 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.18806 - 40 + 1 1.52 54589.8 0.449999988079071 2783 5496 8277 SUDHL4_400M_050219_2,8281 SUDHL4_400M_050219_2,8281, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8283 44.664 84.0 476530.0 25 0 108750.0 30246 QWTSRKRK 8 61 545.3165147194395 1088.618476505679 2 545.3168823122978 MULTI CID FTMS 0 0 0 8282 494319.8125 0.3903996667954323 13 -0.475372314453125 1 Unmodified _QWTSRKRK_ ENST00000275820.3_1_7:156745216-156745255:+|nuORF 0.7936320650641473 0.8195151834710337 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 37523.8 1.0 2784 5497 8282 SUDHL4_400M_050219_2,8283 SUDHL4_400M_050219_2,8283,QWTSRKRK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8284 44.672 452.0 187770.0 25 0 28591.0 -1 VSRHHRLP 8 107 522.2958238627225 1042.577094792245 2 522.2960082888603 MULTI CID FTMS 0 0 0 8282 132215.53125 0.2014119938597123 14 -0.5085945129394531 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VSRHHRLP_ ENST00000243253.7_1_3:127789476-127789554:+|nuORF 5.230669730166228 0.792582437072536 6 {M(Oxidation (M))|F} 1 -1 11.594 0.0 0.0 1.112 0.0 0.0 877.4977928897043 0.0 877.4977928897043 0.0 1.5051499783199065 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.112 - 39 + 1 1.52 66215.8 1.0 2785 5497 8282 SUDHL4_400M_050219_2,8284 SUDHL4_400M_050219_2,8284,VSRHHRLP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8285 44.681 552.0 179130.0 25 0 9219.9 -1 0 86 864.9376883869602 1727.8608238407205 2 864.9384643435478 MULTI CID FTMS 0 0 0 8282 128297.1328125 0.6169229259624103 -3 0.0884323120117187 3 6 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQA{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q 15 -1 + 110.15 0.0 0.0 6.3748 6.3748 92.58 0.0 0.0 0.0 78.42191182099583 11.879165495209278 11.879165495209278 18.57840941039747 0 1.3494850021680094 2.0 0.6989700043360187 1.885151878060192 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQA{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]AQAENYE[K{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]AQAENY[SG]{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PGG[QP]AQAENYE[K{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]AQAEGGYE[K{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]A[AG]AENYE[K{I|L}];[NP]{I|L}N[QP]AQAENYE[K{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]AMGDG{M(Oxidation (M))|F}{I|L}E{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]AMGDG{M(Oxidation (M))|F}{I|L}N[Q{I|L}];{[QV]|[N{I|L}]|[RA]|[KV]}PN[QP]AMGDG{M(Oxidation (M))|F}{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]} 6.3748;5.2996;4.8789;4.7769;4.7769;4.7769;4.6322;4.6282;4.5263;4.454 -;-;-;-;-;-;-;-;-;- 1700 + 1 1.52 70738.6 1.0 2786 5497 8282 SUDHL4_400M_050219_2,8285 SUDHL4_400M_050219_2,8285, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8286 44.687 284.0 258570.0 25 0 49256.0 + 22982 LSGLTQVLL 9 109 472.2947761421159 942.5749993510318 2 472.2935668826103 MULTI CID FTMS 0 0 0 8282 119073.515625 0.0749203793915895 -4 0.1231346130371093 4 Unmodified _LSGLTQVLL_ ENSG00000131067|ENST00000336431|GGT7 46.020951573049366 0.0490941689151868 6 [{I|L}A]{[WT]|[RM]}QV{I|L}{I|L} 8 3 + 53.645 0.0 0.0 5.6913 5.6913 78.602 0.0 0.0 0.0 6.093921151867463 10.172203223519531 6.093921151867463 1.3033376849500655 0 1.242992819099939 1.6989700043360187 1.1549471895720984 0.0 [{I|L}A]{[WT]|[RM]}QV{I|L}{I|L};[{I|L}A]{[TV]|[{I|L}S]}SQV{I|L}{I|L};[{I|L}A]{[WT]|[RM]}GAV{I|L}{I|L};[{I|L}A]{[TV]|[{I|L}S]}SGAV{I|L}{I|L};{[TV]|[{I|L}S]}[{I|L}A]SQV{I|L}{I|L};[{I|L}A]N{[TV]|[{I|L}S]}TV{I|L}{I|L};[{I|L}A]{[WT]|[RM]}RA{I|L}{I|L};{[TV]|[{I|L}S]}[{I|L}A]SGAV{I|L}{I|L};[{I|L}A][VG]SATV{I|L}{I|L};[{I|L}A]{[WT]|[RM]}GVA{I|L}{I|L} 5.6913;5.5531;5.3662;5.2337;5.0448;4.8204;4.7345;4.7255;4.501;4.4094 -;-;-;-;-;-;-;-;-;- 952 1 1.52 60320.2 1.0 2787 5497 8282 SUDHL4_400M_050219_2,8286 SUDHL4_400M_050219_2,8286,LSGLTQVLL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8287 44.7 800.0 143200.0 25 0 16570.0 + -1 KQMDSNWTL 9 136 569.7634628568808 0 569.7637206912041 PEAK CID FTMS 0 0 0 8282 113708.765625 0.5210412317413713 -1 0.040802001953125 5 Oxidation (M) _KQM(Oxidation (M))DSNWTL_ nc|ENSG00000108039|Q9NQW7-2|XPNPEP1;ENST00000475123.1_1_10:111651462-111667565:-|nuORF;ENSG00000108039|ENST00000502935|XPNPEP1;nc|ENSG00000108039|Q9NQW7|XPNPEP1;nc|ENSG00000108039|Q9NQW7-4|XPNPEP1 32.78568957990786 0.0971838787772021 6 WNSD 4 -1 20.878 0.0 0.0 1.8354 0.0 0.0 232.1420858157041 400.1664522760376 632.3085380917416 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.7742275032520141 WNSD 1.8354 - 437 + 1 1.52 89785.1 0.5299999713897705 2788 5497 8282 SUDHL4_400M_050219_2,8287 SUDHL4_400M_050219_2,8287,KQMDSNWTL False False KQMDSNWTL 44.700342 569.763720691204 1009217.3125 8282.0 nc|ENSG00000108039|Q9NQW7-2|XPNPEP1;;ENST00000475123.1_1_10:111651462-111667565:-|nuORF;;ENSG00000108039|ENST00000502935|XPNPEP1;;nc|ENSG00000108039|Q9NQW7|XPNPEP1;;nc|ENSG00000108039|Q9NQW7-4|XPNPEP1 6.364439646402995 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8288 44.705 279.0 344570.0 25 0 52415.0 + 23379 LTDPDIHVL 9 108 511.7798682791161 1021.5451836250322 2 511.7800170779228 MULTI CID FTMS 0 0 0 8282 116722.78125 0.0716013260836059 -4 0.1231346130371093 6 Unmodified _LTDPDIHVL_ ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7 57.47134341890925 0.0274820932774257 6 {I|L}TDPD{I|L}HV{I|L} 9 0 + 70.329 0.0 0.0 6.8846 6.8846 94.833 0.0 0.0 0.0 34.165939551876164 6.748521869401316 6.748521869401316 28.886550318386817 0 0.7134679910804405 2.0 0.0 0.0 + + {I|L}TDPD{I|L}HV{I|L};{I|L}THHV[RP]Y;{I|L}THH[YR][VP];[VP]THVHH[VP];[VP]T[YT][{M(Oxidation (M))|F}V][VP];[HV][TP]VHH[VP];[HV]{I|L}[PS]HH[VP];[H{I|L}][PS]VHH[VP];[H{I|L}]V[PS]HH[VP];[{I|L}A]{[YD]|[{M(Oxidation (M))|F}M]}V[{M(Oxidation (M))|F}V][VP] 6.8846;4.0569;3.2515;2.0075;1.2704;1.02;1.02;0.8924;0.8924;0.55984 +;-;-;-;-;-;-;-;-;- + 1330 + 1 1.52 75801.1 1.0 2789 5497 8282 SUDHL4_400M_050219_2,8288 SUDHL4_400M_050219_2,8288,LTDPDIHVL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8290 44.711 168.0 431370.0 25 0 26231.0 -1 0 71 857.9286056945348 1713.8426584558697 2 857.9296752810478 MULTI CID FTMS 0 0 0 8289 353980.46875 0.7388982372443003 3 -0.1545143127441406 1 6 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQR 10 -1 97.67 0.0 0.0 5.6989 0.0 0.0 0.0 575.2462862604124 575.2462862604124 70.59176592564398 0.0 0.0 0.0 0 2.1237125054200234 2.0 0.0 1.1307196863200843 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQR 5.6989 - 665 + 1 1.52 54132.3 1.0 2790 5498 8289 SUDHL4_400M_050219_2,8290 SUDHL4_400M_050219_2,8290, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8291 44.72 513.0 115090.0 25 0 8954.0 -1 YMIDPSGVSY 10 85 574.2517582674502 1146.4889636017003 2 574.2526122927666 MULTI CID FTMS 0 0 0 8289 167401.65625 0.4388752196894149 6 -0.2636604309082031 2 Oxidation (M) _YM(Oxidation (M))IDPSGVSY_ ENSG00000100567|ENST00000216455|PSMA3;ENST00000554812.5_1_14:58714534-58734239:+|nuORF;ENST00000555743.1_1_14:58711638-58734239:+|nuORF;nc|ENSG00000100567|P25788-2|PSMA3 25.399314129420983 0.3980215340001851 6 [PS]KG[WC(Carbamidomethyl (C))]YSY 9 -1 [PS]KG[WC(Carbamidomethyl (C))]Y + + 29.464 7.535 0.85783 2.5699 2.5699 51.03 0.0 0.0 0.0 0.0 14.781293244526164 0.0 0.0 0 0.5 0.0 0.3494850021680094 0.0 [PS]KG[WC(Carbamidomethyl (C))]YSY 2.5699 - 250 + 1 1.52 51035.2 1.0 2791 5498 8289 SUDHL4_400M_050219_2,8291 SUDHL4_400M_050219_2,8291,YMIDPSGVSY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8292 44.724 181.0 232430.0 25 0 21966.0 + 12200 GQSGLFTQY 9 85 500.7404659226868 999.4663789121736 2 500.7406799197197 MULTI CID FTMS 0 0 0 8289 188780.890625 0.8351310481536705 -2 0.0885162353515625 3 Unmodified _GQSGLFTQY_ ENSG00000066135|ENST00000372396|KDM4A;ENSG00000107077|ENST00000381309|KDM4C;ENSG00000127663|ENST00000159111|KDM4B;ENST00000480996.1_1_9:6805652-6819052:+|nuORF;ENST00000489243.5_1_9:6758133-6893415:+|nuORF;nc|ENSG00000127663|O94953-2|KDM4B;nc|ENSG00000127663|O94953|KDM4B;nc|ENSG00000293552|Q9H3R0-2|KDM4C;nc|ENSG00000293552|Q9H3R0-3|KDM4C;nc|ENSG00000293552|Q9H3R0-4|KDM4C 13.90604991867851 0.4602628045680013 6 QY 2 7 19.949 0.0 0.0 1.9959 0.0 0.0 690.334342634633 0.0 690.334342634633 0.0 8.354706403678875 0.0 0.0 0 0.0 0.0 0.0 0.5 + QY 1.9959 + + 95 + 1 1.52 38805.8 1.0 2792 5498 8289 SUDHL4_400M_050219_2,8292 SUDHL4_400M_050219_2,8292,GQSGLFTQY False True GQSGLFTQY 44.723908 500.74067991972 1556689.625 8289.0 ENSG00000066135|ENST00000372396|KDM4A;;ENSG00000107077|ENST00000381309|KDM4C;;nc|ENSG00000293552|Q9H3R0-2|KDM4C;;nc|ENSG00000127663|O94953-2|KDM4B;;ENST00000489243.5_1_9:6758133-6893415:+|nuORF;;nc|ENSG00000127663|O94953|KDM4B;;nc|ENSG00000293552|Q9H3R0-4|KDM4C;;nc|ENSG00000293552|Q9H3R0-3|KDM4C;;ENST00000480996.1_1_9:6805652-6819052:+|nuORF;;ENSG00000127663|ENST00000159111|KDM4B 3.345986882845561 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8293 44.733 545.0 161160.0 25 0 15379.0 + + 40012 KLGDIMGV 8 119 424.73061078688033 847.4466686405607 2 424.7310668826103 MULTI CID FTMS 0 0 0 8289 158979.71875 0.675955014557209 -2 0.0885162353515625 4 Oxidation (M) _VGEKLM(Oxidation (M))GV_ ENSG00000140829|ENST00000268482|DHX38;ENST00000566329.1_1_16:72134993-72137705:+|nuORF 50.855029805455786 0.1352255786796883 6 [VG]EK{I|L}{M(Oxidation (M))|F}GV 8 -1 + 62.867 0.0 0.0 7.4184 7.4184 87.292 0.0 0.0 0.0 11.338483496748708 42.34514353444801 11.338483496748708 4.490925311194189 0 1.1677353201839438 2.0 1.055462187404089 0.0 [VG]EK{I|L}{M(Oxidation (M))|F}GV;[VG]T[VG]{I|L}{M(Oxidation (M))|F}GV;[VG]T{I|L}[VG]{M(Oxidation (M))|F}GV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[VG]{I|L}{M(Oxidation (M))|F}R;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}R{M(Oxidation (M))|F}R;[K{I|L}]GD{I|L}{M(Oxidation (M))|F}GV;[VG]EK[VP]GY;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[VG]{M(Oxidation (M))|F}R;[VG]T[VG][VP]GY;[VG]EK[RP]Y 7.4184;6.8884;5.7656;5.4031;5.3918;5.3805;4.6444;4.2802;4.1144;3.888 +;-;-;-;-;-;-;-;-;- + 554 1 1.52 74190.1 1.0 2793 5498 8289 SUDHL4_400M_050219_2,8293 SUDHL4_400M_050219_2,8293,VGEKLMGV False False KLGDIMGV 44.73347 424.73106688261 1079194.75 8289.0 ENSG00000140829|ENST00000268482|DHX38;;ENST00000566329.1_1_16:72134993-72137705:+|nuORF 6.575473149617513 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8294 44.741 397.0 218150.0 25 0 32777.0 + -1 VRKVQFPIM 9 110 567.3297394266125 1132.644925920025 2 567.3300659060478 MULTI CID FTMS 0 0 0 8289 131559.703125 0.0834093774897039 -13 0.4184761047363281 5 Oxidation (M) _VRKVQFPIM(Oxidation (M))_ REV__ENST00000509330.5_1_6:64394512-64394560:+|nuORF 5.230669730166228 0.7320841359114558 6 {I|L}QT[K{I|L}] 5 -1 15.942 0.0 0.0 1.4075 0.0 0.0 531.2475453107437 0.0 531.2475453107437 0.0 6.5449946266762815 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}QT[K{I|L}] 1.4075 - 134 1 1.52 75428.1 1.0 2794 5498 8289 SUDHL4_400M_050219_2,8294 SUDHL4_400M_050219_2,8294,VRKVQFPIM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8295 44.754 800.0 130010.0 25 0 16653.0 + + 38409 KLFDDDDSGKISL 13 112 726.8640981518613 1451.7136433705225 2 726.8648559451103 MULTI CID FTMS 0 0 0 8289 120992.5625 0.95178268030071 -1 0.0477142333984375 6 Unmodified _TRFERWDDKSL_ ENSG00000153140|ENST00000283122|CETN3 19.361941925380144 0.6323962752489956 6 {I|L}{M(Oxidation (M))|F}DDDDSGK{I|L}S{I|L} 12 -1 126.52 0.0 0.0 8.7154 0.0 0.0 128.0953083722672 0.0 128.0953083722672 0.0 93.71377068709484 0.0 0.0 0 4.284801742864806 0.0 1.1382104921644451 0.0 {I|L}{M(Oxidation (M))|F}DDDDSGK{I|L}S{I|L} 8.7154 - 3403 1 1.52 78462.9 0.5400000214576721 2795 5498 8289 SUDHL4_400M_050219_2,8295 SUDHL4_400M_050219_2,8295,TRFERWDDKSL False False KLFDDDDSGKISL 44.754416 726.86485594511 745097.3125 8289.0 ENSG00000153140|ENST00000283122|CETN3 7.552694638570149 2.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8297 44.761 104.0 423160.0 25 0 87495.0 -1 CKKRCKAKR 9 64 589.3425237759607 1176.6704946187212 2 589.3431884646416 MULTI CID FTMS 0 0 0 8296 602070.3125 1.0 0 0.0 1 Carbamidomethyl (C) _C(Carbamidomethyl (C))KKRCKAKR_ ENSG00000112655|ENST00000230419|PTK7;ENST00000487673.5_1_6:43111066-43128616:+|nuORF;ENST00000493339.1_1_6:43111066-43112355:+|nuORF;nc|ENSG00000112655|Q13308-2|PTK7;nc|ENSG00000112655|Q13308-3|PTK7;nc|ENSG00000112655|Q13308-4|PTK7;nc|ENSG00000112655|Q13308-5|PTK7;nc|ENSG00000112655|Q13308-6|PTK7 0.6014990680409731 0.8936861360942873 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 41274.2 1.0 2796 5499 8296 SUDHL4_400M_050219_2,8297 SUDHL4_400M_050219_2,8297,CKKRCKAKR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8298 44.772 679.0 111200.0 25 0 10985.0 + 8797 EWDSSFTAL 9 120 528.2391962366532 1054.4638395401064 2 528.2393676638603 MULTI CID FTMS 0 0 0 8296 92841.1796875 1.0 0 0.0 2 Unmodified _EWDSSFTAL_ REV__ENSG00000151468|ENST00000378825|CCDC3;REV__nc|ENSG00000151468|Q9BQI4-2|CCDC3 18.13498045792455 0.3457906370836843 6 VY 2 -1 20.969 0.0 0.0 1.9886 0.0 0.0 774.3220376375658 0.0 774.3220376375658 0.0 8.20489028679166 0.0 0.0 0 0.0 0.0 0.0 0.0 VY 1.9886 - 236 + 1 1.52 64051.6 1.0 2797 5499 8296 SUDHL4_400M_050219_2,8298 SUDHL4_400M_050219_2,8298,EWDSSFTAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8299 44.777 254.0 266870.0 25 0 20345.0 + 16940 KILPDLNTV 9 101 506.8050381099096 1011.5955232866193 2 506.8055602908134 MULTI CID FTMS 0 0 0 8296 200013.359375 0.2540737205999772 -3 0.1374320983886718 3 Unmodified _KILPDLNTV_ ENSG00000142207|ENST00000382751|URB1 53.832793166522166 0.0319663582346103 6 [K{I|L}]{I|L}[DP]{I|L}NTV 9 0 + 34.995 0.0 0.0 3.4594 3.4594 71.043 0.0 0.0 0.0 1.077858005940051 9.137342758552698 1.077858005940051 1.077858005940051 0 1.0044321917401078 0.0 0.0 0.5796896906561032 + + [K{I|L}]{I|L}[DP]{I|L}NTV;{NN|[MP]|[D{I|L}]|[EV]}P[K{I|L}]{I|L}NTV;[DP]{I|L}[K{I|L}]{I|L}NTV;{NN|[MP]|[D{I|L}]|[EV]}PN{I|L}[K{I|L}]TV;[K{I|L}]{I|L}[DP]{I|L}GGTV;{NN|[MP]|[D{I|L}]|[EV]}P[K{I|L}]{I|L}GGTV;{[TV]|[{I|L}S]}[{I|L}P][VG]{I|L}NTV;[DP]{I|L}N{I|L}[K{I|L}]TV;[{I|L}T][VP][VG]{I|L}NTV;[DP]{I|L}[K{I|L}]{I|L}GGTV 3.4594;3.3529;2.7028;2.6101;2.5492;2.4426;2.0836;1.9601;1.8888;1.7926 +;-;-;-;-;-;-;-;-;- + 437 1 1.52 56809.9 1.0 2798 5499 8296 SUDHL4_400M_050219_2,8299 SUDHL4_400M_050219_2,8299,KILPDLNTV True True KILPDLNTV 44.777052 506.805560290813 4354611.0 8296.0 ENSG00000142207|ENST00000382751|URB1 6.173986593882243 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8300 44.782 243.0 151300.0 25 0 6949.5 30708 RGCPGGGGG 9 80 359.1597538453384 716.3049547574768 2 359.1594116091728 MULTI CID FTMS 0 0 0 8296 168051.25 1.0 0 0.0 4 Unmodified _RGCPGGGGG_ ENST00000431232.6_1_16:431845-431977:-|nuORF 0.0 0.9146841635160942 6 P 1 8 10.089 0.0 0.0 1.4084 0.0 0.0 601.2408277206589 0.0 601.2408277206589 0.0 8.098943791441968 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 1.4084 + + 6 + 1 1.52 34317.7 1.0 2799 5499 8296 SUDHL4_400M_050219_2,8300 SUDHL4_400M_050219_2,8300,RGCPGGGGG False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8301 44.795 800.0 119760.0 25 0 18271.0 + 38886 TVKVTKVVNY 10 132 575.8432141312703 1149.6718753293403 2 575.8431274294853 MULTI CID FTMS 0 0 0 8296 100923.953125 0.1557209628453913 -11 0.3607711791992187 5 Unmodified _TVKVTKVVNY_ REV__ENSG00000137948|ENST00000399546|BRDT;REV__nc|ENSG00000137948|Q58F21-2|BRDT;REV__nc|ENSG00000137948|Q58F21-3|BRDT;REV__nc|ENSG00000137948|Q58F21-4|BRDT;REV__nc|ENSG00000137948|Q58F21-5|BRDT 3.5964929083625545 0.7100006075494749 6 Y 1 -1 11.99 0.0 0.0 1.0429 0.0 0.0 968.597746156292 0.0 968.597746156292 0.0 1.1522446068913703 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0429 + + 26 + 1 1.52 76799.5 0.4900000095367431 2800 5499 8296 SUDHL4_400M_050219_2,8301 SUDHL4_400M_050219_2,8301,TVKVTKVVNY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8303 44.804 310.0 206640.0 25 0 25839.0 + 19420 LETSLFRKI 9 100 553.830663241412 1105.646773549624 2 553.8304321169853 MULTI CID FTMS 0 0 0 8302 164878.390625 0.3273177525594438 16 -0.5486297607421875 1 Unmodified _LETSLFRKI_ REV__ENSG00000115207|ENST00000264720|GTF3C2 11.640296217721598 0.521594087909532 6 {[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F} 4 -1 16.744 0.0 0.0 1.5144 0.0 0.0 0.0 585.3616532705802 585.3616532705802 4.269856214892371 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {[QN]|[E{I|L}]|[KN]}K{M(Oxidation (M))|F} 1.5144 - 54 1 1.52 54308.5 1.0 2801 5500 8302 SUDHL4_400M_050219_2,8303 SUDHL4_400M_050219_2,8303,LETSLFRKI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8304 44.81 354.0 92404.0 25 0 8542.1 7964 ELTEILVRF 9 66 560.3217780573636 1118.6290031815272 2 560.3221923708916 MULTI CID FTMS 0 0 0 8302 158182.734375 0.2750771157529161 -9 0.3081207275390625 2 Unmodified _ELTEILVRF_ ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP 4.3292370932331545 0.7635526921153418 6 {M(Oxidation (M))|F} 1 8 11.259 0.0 0.0 1.0065 0.0 0.0 953.5498996432444 0.0 953.5498996432444 0.0 0.5457223471253414 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0065 + + 20 + 1 1.52 30727.7 1.0 2802 5500 8302 SUDHL4_400M_050219_2,8304 SUDHL4_400M_050219_2,8304,ELTEILVRF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8305 44.816 339.0 265150.0 25 0 25370.0 + 30369 RALDHYLTL 9 81 551.3060492661153 1100.5975455990306 2 551.3069335818291 MULTI CID FTMS 0 0 0 8302 159243.828125 0.4818067868557711 -1 0.0410003662109375 3 Unmodified _RALDHYLTL_ ENSG00000163156|ENST00000368905|SCNM1;ENST00000459799.1_1_1:151140554-151141558:+|nuORF;ENST00000497147.1_1_1:151139275-151141558:+|nuORF;nc|ENSG00000163156|Q9BWG6-2|SCNM1 24.99096001346401 0.2132109383330889 6 THY{I|L}T{I|L} 6 4 53.863 0.0 0.0 4.894 0.0 0.0 354.19566542793126 0.0 354.19566542793126 0.0 26.41590309631689 0.0 0.0 0 0.7215141619232908 0.0 0.7887254899964358 0.0 THY{I|L}T{I|L} 4.894 - 152 1 1.52 71941.5 1.0 2803 5500 8302 SUDHL4_400M_050219_2,8305 SUDHL4_400M_050219_2,8305,RALDHYLTL False True RALDHYLTL 44.816174 551.306933581829 1462823.125 8302.0 nc|ENSG00000163156|Q9BWG6-2|SCNM1;;ENST00000459799.1_1_1:151140554-151141558:+|nuORF;;ENSG00000163156|ENST00000368905|SCNM1;;ENST00000497147.1_1_1:151139275-151141558:+|nuORF 6.897155125935872 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8306 44.83 800.0 141310.0 25 0 17097.0 -1 SLVAACCCRCL 11 103 656.7875755713701 1311.56059820954 2 656.7878295779228 MULTI CID FTMS 0 0 0 8302 136285.1875 1.0 0 0.0 4 3 Carbamidomethyl (C) _SLVAAC(Carbamidomethyl (C))C(Carbamidomethyl (C))C(Carbamidomethyl (C))RCL_ ENSG00000180730|ENST00000319420|SHISA2 9.38312468134398 0.8308777417566128 6 [R{I|L}]{M(Oxidation (M))|F}QGDE{I|L} 8 -1 42.409 0.0 0.0 3.2335 0.0 0.0 0.0 350.08439501224024 350.08439501224024 26.92471268044436 0.0 0.0 0.0 0 0.5 0.0 0.0 0.3252574989159953 [R{I|L}]{M(Oxidation (M))|F}QGDE{I|L} 3.2335 - 349 1 1.52 89508.5 0.5699999928474426 2804 5500 8302 SUDHL4_400M_050219_2,8306 SUDHL4_400M_050219_2,8306,SLVAACCCRCL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8307 44.837 389.0 221230.0 25 0 33649.0 + 12093 GQHPNIITL 9 100 496.7796982528554 991.5448435725108 2 496.7795898318291 MULTI CID FTMS 0 0 0 8302 135098.78125 0.2504490883714614 -3 0.1376304626464843 5 Unmodified _GQHPNIITL_ ENSG00000071242|ENST00000265678|RPS6KA2;ENSG00000072133|ENST00000262752|RPS6KA6;ENSG00000117676|ENST00000374168|RPS6KA1;ENSG00000177189|ENST00000379565|RPS6KA3;ENST00000495332.1_1_X:83359500-83361456:-|nuORF;nc|ENSG00000071242|Q15349-2|RPS6KA2;nc|ENSG00000071242|Q15349-3|RPS6KA2;nc|ENSG00000072133|Q9UK32-2|RPS6KA6;nc|ENSG00000117676|Q15418-2|RPS6KA1;nc|ENSG00000117676|Q15418-3|RPS6KA1;nc|ENSG00000117676|Q15418-4|RPS6KA1 43.85829265575387 0.0542763391141878 6 [{I|L}T]{I|L}CC{I|L}{I|L}T{I|L} 9 5 + 49.857 0.0 0.0 5.0282 5.0282 81.643 0.0 0.0 0.0 6.47560191392617 16.478174818886373 6.47560191392617 6.47560191392617 0 0.5 1.5228787452803376 0.2215141619232908 0.0 [{I|L}T]{I|L}CC{I|L}{I|L}T{I|L};{[QG]|[NA]}H[NP]{I|L}{I|L}T{I|L};[{I|L}T]{I|L}CC{I|L}T{I|L}{I|L};[HA]N[NP]{I|L}{I|L}T{I|L};[AG]GH[NP]{I|L}{I|L}T{I|L};{[QG]|[NA]}H{I|L}[NP]{I|L}T{I|L};[HA]N{I|L}[NP]{I|L}T{I|L};{[QG]|[NA]}H[NP]{I|L}T{I|L}{I|L};[HA]GG[NP]{I|L}{I|L}T{I|L};[HA]N[NP]{I|L}T{I|L}{I|L} 5.0282;4.3751;4.3463;4.2845;3.8147;3.5228;3.4322;3.3652;3.3558;3.2746 -;+;-;-;-;-;-;-;-;- + 836 1 1.52 71956.1 1.0 2805 5500 8302 SUDHL4_400M_050219_2,8307 SUDHL4_400M_050219_2,8307,GQHPNIITL True True GQHPNIITL 44.836991 496.779589831829 5676201.0 8302.0 nc|ENSG00000117676|Q15418-2|RPS6KA1;;ENST00000495332.1_1_X:83359500-83361456:-|nuORF;;nc|ENSG00000117676|Q15418-4|RPS6KA1;;ENSG00000117676|ENST00000374168|RPS6KA1;;nc|ENSG00000071242|Q15349-3|RPS6KA2;;nc|ENSG00000117676|Q15418-3|RPS6KA1;;ENSG00000072133|ENST00000262752|RPS6KA6;;nc|ENSG00000072133|Q9UK32-2|RPS6KA6;;ENSG00000177189|ENST00000379565|RPS6KA3;;ENSG00000071242|ENST00000265678|RPS6KA2;;nc|ENSG00000071242|Q15349-2|RPS6KA2 5.156476656595866 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8308 44.846 522.0 153770.0 25 0 29792.0 + 23685 TLNDIMTRV 9 105 539.7816493323659 1077.5487457315317 2 539.7809326052666 MULTI CID FTMS 0 0 0 8302 127061.171875 0.8486129437158783 -1 0.0410003662109375 6 Unmodified _LTSRGPTSPY_ nc|ENSG00000170322|Q6P4R8-3|NFRKB;ENSG00000170322|ENST00000682444|NFRKB;nc|ENSG00000170322|Q6P4R8-2|NFRKB 27.628801355627647 0.3479284626772844 6 [{I|L}T]ND{I|L}{M(Oxidation (M))|F}TRV 9 7 + 62.562 0.0 0.0 5.8059 5.8059 87.617 0.0 0.0 0.0 26.13878592719805 3.2652668035922403 3.2652668035922403 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.3807196863200844 [{I|L}T]ND{I|L}{M(Oxidation (M))|F}TRV;[{I|L}T]GGD{I|L}{M(Oxidation (M))|F}TRV;{NN|[MP]|[D{I|L}]|[EV]}[RH]{I|L}DNPV;[{I|L}T]N[YE][PS]RV;{[QV]|[N{I|L}]|[RA]|[KV]}K[KS]DNPY;{NN|[MP]|[D{I|L}]|[EV]}[RH]{I|L}DGGPV;[{I|L}T]V[C(Carbamidomethyl (C)){M(Oxidation (M))|F}][PS]RV;{[QV]|[N{I|L}]|[RA]|[KV]}K[KS]DGGPY;{[QV]|[N{I|L}]|[RA]|[KV]}D[VP][NP]NPV;[KA]R[KS]DNPY 5.8059;4.9514;3.1263;2.8844;2.6828;2.2718;2.1001;1.8282;1.7162;1.611 -;-;-;-;-;-;-;-;-;- 236 + 1 1.52 65694.9 1.0 2806 5500 8302 SUDHL4_400M_050219_2,8308 SUDHL4_400M_050219_2,8308,LTSRGPTSPY False False TLNDIMTRV 44.846193 539.780932605267 681520.0625 8302.0 nc|ENSG00000170322|Q6P4R8-3|NFRKB;;ENSG00000170322|ENST00000682444|NFRKB;;nc|ENSG00000170322|Q6P4R8-2|NFRKB 5.878787517547607 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8309 44.86 800.0 83210.0 25 0 6537.0 -1 VVASNIMEV 9 118 489.2520376101842 976.4895222871684 2 489.2523986697197 MULTI CID FTMS 0 0 0 8302 106816.5234375 1.0 0 0.0 7 Oxidation (M) _VVASNIM(Oxidation (M))EV_ ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3 26.88365393820708 0.1891292719743517 6 VVA 3 -1 22.192 0.0 0.0 2.2726 0.0 0.0 0.0 704.2918348694527 704.2918348694527 4.23461129449986 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 VVA 2.2726 + + 333 1 1.52 56386.8 0.4699999988079071 2807 5500 8302 SUDHL4_400M_050219_2,8309 SUDHL4_400M_050219_2,8309,VVASNIMEV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8311 44.868 193.0 285530.0 25 0 57695.0 + 27349 PHSSPLALL 9 77 467.77162695849336 933.5287009837868 2 467.7718994021416 MULTI CID FTMS 0 0 0 8310 246838.3125 0.0295506009914315 14 -0.4665946960449219 1 Unmodified _PHSSPLALL_ ENST00000517495.1_1_8:41132739-41134502:-|nuORF 30.22481116460888 0.1466181017706357 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 9 4 + 28.936 0.0 0.0 3.0996 3.0996 80.667 0.0 0.0 0.0 2.9221966125412315 18.701746761134714 2.9221966125412315 10.140143618001218 0 0.805462187404089 0.0 1.1549471895720984 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]{I|L}SP{I|L} 3.0996;2.0134 -;- 179 1 1.52 49804.5 1.0 2808 5501 8310 SUDHL4_400M_050219_2,8311 SUDHL4_400M_050219_2,8311,PHSSPLALL False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8312 44.873 303.0 160400.0 25 0 10732.0 + 12116 GQIEVVPEV 9 94 485.2660242716376 968.5174956100752 2 485.2652465701103 MULTI CID FTMS 0 0 0 8310 69243.1640625 0.1507125749207609 4 -0.1277885437011718 2 Unmodified _GQIEVVPEV_ ENSG00000118482|ENST00000262043|PHF3;nc|ENSG00000118482|Q92576-2|PHF3 22.736283301280096 0.2418982879461534 6 TV 2 8 19.085 0.0 0.0 1.9706 0.0 0.0 750.3910745669097 0.0 750.3910745669097 0.0 -0.5358457490175752 -0.5358457490175752 0.0 0 0.0 0.0 0.2887254899964357 0.0 TV 1.9706 - 199 + 1 1.52 44119.5 1.0 2809 5501 8310 SUDHL4_400M_050219_2,8312 SUDHL4_400M_050219_2,8312,GQIEVVPEV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8313 44.887 800.0 108820.0 25 0 18596.0 16482 KAKRLLYCSL 10 106 597.8561619774339 1193.6977710216677 2 597.8564941287041 MULTI CID FTMS 0 0 0 8310 160250.125 0.716278555875725 4 -0.1277885437011718 3 Unmodified _KAKRLLYCSL_ ENSG00000151789|ENST00000281523|ZNF385D;ENST00000495739.1_1_3:21478408-21552461:-|nuORF;ZNF385D|p.C209F|1|0.24|ENSG00000151789|chr3:21437017-21437017|C/A|missense_variant 3.5964929083625545 0.7100006075494749 6 Y 1 9 11.259 0.0 0.0 0.94321 0.0 0.0 1012.623580813463 0.0 1012.623580813463 0.0 2.6298491112873954 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.94321 + + 18 + 1 1.52 68361.4 0.6100000143051147 2810 5501 8310 SUDHL4_400M_050219_2,8313 SUDHL4_400M_050219_2,8313,KAKRLLYCSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8314 44.897 570.0 165720.0 25 0 16914.0 + 35388 STFDHPELVKL 11 86 643.3414732644113 1284.6683935956223 2 643.3391601443291 MULTI CID FTMS 0 0 0 8310 84691.59375 1.0 0 0.0 4 Unmodified _STFDHPELVKL_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 67.08073823543168 0.0408645806987127 6 {[MG]|[TS]}{M(Oxidation (M))|F}DH[EP]{I|L}VK{I|L} 11 0 + 50.283 0.0 0.0 3.9141 3.9141 72.41 0.0 0.0 0.0 7.367585652254185 1.1394335230683694 1.1394335230683694 1.1394335230683694 0 1.8807196863200843 0.0 0.0 0.3807196863200844 + + {[MG]|[TS]}{M(Oxidation (M))|F}DH[EP]{I|L}VK{I|L};{[MG]|[TS]}{M(Oxidation (M))|F}DH[EP]{I|L}V{I|L}K;{[MG]|[TS]}{M(Oxidation (M))|F}D[{I|L}P]{[YC]|[HE]}VK{I|L};{[MG]|[TS]}{M(Oxidation (M))|F}D[{I|L}P]{[YC]|[HE]}V{I|L}K 3.9141;3.8254;2.8081;2.7194 +;-;-;- + 273 + 1 1.52 75279.1 1.0 2811 5501 8310 SUDHL4_400M_050219_2,8314 SUDHL4_400M_050219_2,8314,STFDHPELVKL True True STFDHPELVKL 44.896928 643.339160144329 612385.3125 8310.0 nc|ENSG00000166226|P78371-2|CCT2;;ENSG00000166226|ENST00000299300|CCT2 6.292938391367595 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8316 44.903 158.0 396100.0 25 0 36664.0 + 9613 FLLDKKIGV 9 81 516.8258286262371 1031.6371043192742 2 516.8263427615166 MULTI CID FTMS 0 0 0 8315 289913.09375 0.1058541448524265 5 -0.1630516052246093 1 Unmodified _FLLDKKIGV_ ENSG00000166226|ENST00000299300|CCT2;nc|ENSG00000166226|P78371-2|CCT2 29.081581746732265 0.1611639662936252 6 {M(Oxidation (M))|F}{I|L}{I|L}DK[K{I|L}]GV 9 0 + 58.28 0.0 0.0 5.6493 5.6493 92.183 0.0 0.0 0.0 27.601644650775405 0.8576265223225832 0.8576265223225832 58.28037684752399 0 0.4247425010840047 1.0969100130080565 0.4247425010840047 0.0 + + {M(Oxidation (M))|F}{I|L}{I|L}DK[K{I|L}]GV 5.6493 + + 125 + 1 1.52 52492.9 1.0 2812 5502 8315 SUDHL4_400M_050219_2,8316 SUDHL4_400M_050219_2,8316,FLLDKKIGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8317 44.913 612.0 111300.0 25 0 20415.0 + 41965 VQLISVLT 8 95 436.7749079157141 0 436.7748596072197 PEAK CID FTMS 0 0 0 8315 141339.5 0.1071138423949206 10 -0.304046630859375 2 Unmodified _VQLISVLT_ REV__ENST00000480296.5_1_3:50385794-50386017:-|nuORF 0.6903765706972694 0.5983587967854751 6 Q 1 -1 3.9794 0.0 0.0 0.4566 0.0 0.0 453.2890603609218 287.1649263971313 740.4539867580531 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.4566 + + 2 + 1 1.52 57588.5 1.0 2813 5502 8315 SUDHL4_400M_050219_2,8317 SUDHL4_400M_050219_2,8317,VQLISVLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8318 44.925 670.0 162270.0 25 0 14227.0 + + 36411 KIVDFSYSV 9 139 529.2819375729492 1056.5493222126984 2 529.2826415896416 MULTI CID FTMS 0 0 0 8315 109745.2421875 0.1507168178592408 -6 0.2799491882324219 3 Unmodified _SYTPYLKSV_ nc|ENSG00000156970|O60566-3|BUB1B;ENST00000453867.6_3_15:40509736-40545453:+|nuORF;ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-2|BUB1B 61.357469665136826 0.0253304979873734 6 [K{I|L}]VD{M(Oxidation (M))|F}SYSV 9 -1 + 75.384 0.0 0.0 7.1349 7.1349 89.111 0.0 0.0 0.0 7.683914130944871 16.478174818886373 7.683914130944871 7.683914130944871 0 0.5 1.0457574905606752 1.2302046884880935 0.0 [K{I|L}]VD{M(Oxidation (M))|F}SYSV;[DV]{I|L}K{M(Oxidation (M))|F}SYSV;{NN|[MP]|[D{I|L}]|[EV]}VK{M(Oxidation (M))|F}SYSV;[K{I|L}]VS{M(Oxidation (M))|F}DYSV;[Q{I|L}][{I|L}T]{M(Oxidation (M))|F}SYSV;[VS][K{I|L}]{M(Oxidation (M))|F}DYSV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}DV[K{I|L}]YSV;{[{M(Oxidation (M))|F}D]|MM}SV[K{I|L}]YSV;{[VA]|[{I|L}G]}A[{I|L}T]{M(Oxidation (M))|F}SYSV;{I|L}{I|L}[QT]{M(Oxidation (M))|F}SYSV 7.1349;6.4077;5.7745;5.7098;5.2759;5.0482;4.6304;4.5871;4.5184;4.2955 -;-;-;-;-;-;-;-;-;- 1014 1 1.52 91015.6 1.0 2814 5502 8315 SUDHL4_400M_050219_2,8318 SUDHL4_400M_050219_2,8318,SYTPYLKSV False False KIVDFSYSV 44.92494 529.282641589642 7915695.5 8315.0 nc|ENSG00000156970|O60566-3|BUB1B;;ENST00000453867.6_3_15:40509736-40545453:+|nuORF;;ENSG00000156970|ENST00000287598|BUB1B;;nc|ENSG00000156970|O60566-2|BUB1B 6.235052744547526 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8319 44.939 800.0 96688.0 25 0 23033.0 -1 0 54 1189.4772966651565 3565.4100605956696 3 1189.812548816204 MULTI CID FTMS 0 0 0 8315 144022.90625 0.6557990853285446 1 -0.0418739318847656 4 6 W{I|L} 2 -1 7.0783 0.0 0.0 0.19853 0.0 0.0 2532.920022609145 730.3128145807249 3263.2328371898698 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W{I|L} 0.19853 - 69 + 1 1.52 68420.4 0.4699999988079071 2815 5502 8315 SUDHL4_400M_050219_2,8319 SUDHL4_400M_050219_2,8319, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8321 44.944 51.0 867420.0 25 0 248280.0 + 1418 ALDKATVLL 9 64 472.2947761421159 942.5749993510318 2 472.2948181033134 MULTI CID FTMS 0 0 0 8320 1196860.75 0.7530579826944822 2 -0.0489959716796875 1 Unmodified _ALDKATVLL_ ENSG00000150593|ENST00000280154|PDCD4;ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4 53.832793166522166 0.0319663582346103 6 [{I|L}A]DKATV{I|L}{I|L} 9 0 + 65.983 0.0 0.0 7.0003 7.0003 92.568 0.0 0.0 0.0 18.935078169319297 10.330145895351848 10.330145895351848 10.969100130080562 0 1.3182503180159344 1.6989700043360187 1.25 0.0 + + [{I|L}A]DKATV{I|L}{I|L};[{I|L}A]{[TV]|[{I|L}S]}NTV{I|L}{I|L};[{I|L}A]{[TV]|[{I|L}S]}SQV{I|L}{I|L};[{I|L}A]{[WT]|[RM]}QV{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}ATV{I|L}{I|L};[{I|L}A]DKS[{I|L}A]{I|L}{I|L};[{I|L}A]{[TV]|[{I|L}S]}GGTV{I|L}{I|L};[{I|L}A]{[TV]|[{I|L}S]}S[AG]V{I|L}{I|L};[{I|L}A]{[WT]|[RM]}[AG]V{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}S[{I|L}A]{I|L}{I|L} 7.0003;5.8366;5.8109;5.4429;4.9914;4.9582;4.8596;4.8339;4.4603;2.9493 +;-;-;-;-;-;-;-;-;- + 215 1 1.52 38731.3 1.0 2816 5503 8320 SUDHL4_400M_050219_2,8321 SUDHL4_400M_050219_2,8321,ALDKATVLL True True ALDKATVLL 44.944017 472.294818103313 8438348.0 8320.0 ENST00000489049.5_1_10:112647518-112650449:+|nuORF;;nc|ENSG00000150593|Q53EL6-2|PDCD4;;ENSG00000150593|ENST00000280154|PDCD4 5.275545756022136 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8322 44.947 178.0 503720.0 25 0 67453.0 + 14440 FLWEAESHA 9 113 545.3165147194395 1088.618476505679 2 545.3156005740166 MULTI CID FTMS 0 0 0 8320 315871.65625 0.2494664106754194 19 -0.5982818603515625 2 Unmodified _IFQKLDPTK_ nc|ENSG00000101846|P08842|STS;ENSG00000101846|ENST00000674429|STS 12.531546534597751 0.4974689918368763 6 {I|L}WEAES[HA] 8 8 48.18 0.0 0.0 4.4258 0.0 0.0 147.19667582384142 0.0 147.19667582384142 0.0 36.38615395233087 0.0 0.0 0 0.0 0.0 1.305462187404089 0.0 {I|L}WEAES[HA] 4.4258 - 188 + 1 1.52 72193.4 1.0 2817 5503 8320 SUDHL4_400M_050219_2,8322 SUDHL4_400M_050219_2,8322,IFQKLDPTK False False FLWEAESHA 44.947477 545.315600574017 1434605.375 8320.0 nc|ENSG00000101846|P08842|STS;;ENSG00000101846|ENST00000674429|STS 8.740837097167969 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8323 44.959 687.0 130780.0 25 0 8485.2 -1 0 90 864.9376883869602 1727.8608238407205 2 864.9395629763603 MULTI CID FTMS 0 0 0 8320 113363.375 0.5451132341685506 3 -0.0839881896972656 3 6 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q 15 -1 + 123.68 0.0 0.0 7.1581 7.1581 90.033 0.0 0.0 0.0 27.61760834195473 13.278324880759484 13.278324880759484 9.030899869919438 0 2.1549471895720984 2.0 0.3807196863200844 1.274227503252014 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}GGEAQA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PGG{I|L}NEAQA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEA[AG]A{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQA{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEA[Y{M(Oxidation (M))|F}][RH]{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}[WQ]QA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NEAQ[{I|L}V]T{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}Q;{[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NE[RN]{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q;[KP]VN{I|L}NEAQA{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Q 7.1581;6.6355;6.6355;6.6355;6.2571;6.0441;5.86;5.8526;5.6396;5.3628 -;-;-;-;-;-;-;-;-;- 1355 + 1 1.52 65587.9 1.0 2818 5503 8320 SUDHL4_400M_050219_2,8323 SUDHL4_400M_050219_2,8323, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8324 44.969 553.0 200020.0 25 0 19577.0 + 32413 SLYGYLRGA 9 149 499.7674133919658 997.5202738507317 2 500.2654907107353 MULTI CID FTMS 0 0 0 8320 92282.5234375 0.4858127924110936 -7 0.3218231201171875 4 Unmodified _RYYSSPLL_ ENSG00000165733|ENST00000374518|BMS1;ENST00000436180.1_10:48941313-48942632:-|nuORF 23.1484247019978 0.5573009939494978 6 {[TV]|[{I|L}S]}[KS]YGY 7 7 35.986 0.0 0.0 3.6075 0.0 0.0 0.0 196.09418190116665 196.09418190116665 13.410297846395586 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {[TV]|[{I|L}S]}[KS]YGY 3.6075 - 506 1 1.52 87649.4 1.0 2819 5503 8320 SUDHL4_400M_050219_2,8324 SUDHL4_400M_050219_2,8324,RYYSSPLL False False SLYGYLRGA 44.969148 500.265490710735 1369244.75 8320.0 ENSG00000165733|ENST00000374518|BMS1;;ENST00000436180.1_10:48941313-48942632:-|nuORF 4.528317133585612 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8326 44.974 64.0 747470.0 25 0 117950.0 + 23380 LTDPDIHVL 9 74 511.7798682791161 1021.5451836250322 2 511.7795898318291 MULTI CID FTMS 0 0 0 8325 767849.3125 0.4710222667640999 3 -0.0908241271972656 1 Unmodified _LTDPDIHVL_ ENSG00000091157|ENST00000254442|WDR7;nc|ENSG00000091157|Q9Y4E6-2|WDR7 50.855029805455786 0.0384952370514206 6 [{I|L}T]DYWV{I|L}{I|L} 8 5 + 50.908 0.0 0.0 4.9834 4.9834 87.184 0.0 0.0 0.0 4.049471895720984 15.994077049709643 4.049471895720984 14.464402447624202 0 0.9247425010840048 2.0 0.8807196863200843 0.0 [{I|L}T]DYWV{I|L}{I|L};[HV]EPVDT{I|L}{I|L};[HV]EPDVT{I|L}{I|L};[HV]EPDTV{I|L}{I|L};[{I|L}T][{M(Oxidation (M))|F}T][WE]{I|L}{I|L};[H{I|L}]DPVDT{I|L}{I|L};[VP]D[H{I|L}]DT{I|L}{I|L};[H{I|L}]DPDVT{I|L}{I|L};[VP]D{[YC]|[HE]}VT{I|L}{I|L};[H{I|L}]DPDTV{I|L}{I|L} 4.9834;3.5675;3.2728;3.1004;2.8359;2.8265;2.8212;2.5318;2.5265;2.3594 -;-;-;-;-;-;-;-;-;- 429 1 1.52 40477.6 1.0 2820 5504 8325 SUDHL4_400M_050219_2,8326 SUDHL4_400M_050219_2,8326,LTDPDIHVL True True LTDPDIHVL 44.973946 511.779589831829 18004860.0 8325.0 ENSG00000091157|ENST00000254442|WDR7;;nc|ENSG00000091157|Q9Y4E6-2|WDR7 6.764780044555664 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8327 44.988 800.0 128840.0 25 0 7629.3 -1 0 91 857.9286056945348 1713.8426584558697 2 858.4303466677666 MULTI CID FTMS 0 0 0 8325 115919.71875 0.2760618139909345 9 -0.25677490234375 2 6 {[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDAD{[QV]|[N{I|L}]|[RA]|[KV]}P[HA] 16 -1 + 87.195 0.0 0.0 5.0877 5.0877 81.306 0.0 0.0 0.0 5.440680443502757 7.659167939666318 5.440680443502757 5.440680443502757 0 0.4247425010840047 2.0 0.8494850021680094 1.1421590589602533 {[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDAD{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];[NP]{I|L}NA[QP]QDAD{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QWD{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDAN{I|L}DP[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDW{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDA[WR]P[HA];[NP]{I|L}NA[QP]QWD{[QV]|[N{I|L}]|[RA]|[KV]}P[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QDA[Y{I|L}]Y[HA];{[QV]|[N{I|L}]|[RA]|[KV]}PNA[QP]QWN{I|L}DP[HA];[NP]{I|L}NA[QP]QDW{[QV]|[N{I|L}]|[RA]|[KV]}P[HA] 5.0877;4.7702;4.6962;4.646;4.474;4.4483;4.3787;4.3456;4.2545;4.1566 -;-;-;-;-;-;-;-;-;- 2018 1 1.52 74364.4 0.550000011920929 2821 5504 8325 SUDHL4_400M_050219_2,8327 SUDHL4_400M_050219_2,8327, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8329 44.993 48.0 833530.0 25 0 176450.0 + -1 VQVKRMIML 9 60 567.3297394266125 1132.644925920025 2 567.3298217654228 MULTI CID FTMS 0 0 0 8328 1083831.625 0.6871535812072339 -6 0.2333869934082031 1 Oxidation (M) _VQVKRM(Oxidation (M))IML_ REV__ENST00000489282.1_1_1:59158492-59165724:-|nuORF 0.6014990680409731 0.8936861360942873 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 36078.4 1.0 2822 5505 8328 SUDHL4_400M_050219_2,8329 SUDHL4_400M_050219_2,8329,VQVKRMIML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8330 44.997 247.0 255200.0 25 0 27993.0 16806 KGPARQAK 8 82 428.2617724454285 854.5089919576569 2 428.2620727419853 MULTI CID FTMS 0 0 0 8328 199551.53125 0.0731661376477129 14 -0.4707717895507812 2 Unmodified _KGPARQAK_ ENSG00000124839|ENST00000264601|RAB17;ENST00000466244.1_1_2:238483664-238484282:-|nuORF;nc|ENSG00000124839|Q9H0T7-2|RAB17 2.302733041254933 0.8103549651115762 6 P 1 7 10.181 0.0 0.0 1.1915 0.0 0.0 739.4452845375382 0.0 739.4452845375382 0.0 9.69651079823194 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 1.1915 + + 4 + 1 1.52 58683.5 1.0 2823 5505 8328 SUDHL4_400M_050219_2,8330 SUDHL4_400M_050219_2,8330,KGPARQAK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8331 45.011 800.0 155560.0 25 0 18862.0 + 17100 KLFEFMHET 9 144 599.2834082938324 1196.5522636544647 2 599.2839233279228 MULTI CID FTMS 0 0 0 8328 173069.0 0.8849691918288037 -1 0.0186424255371093 3 Oxidation (M) _KLFEFM(Oxidation (M))HET_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 80.6760300276096 0.0173529540220427 6 K{I|L}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}{M(Oxidation (M))|F}THE 9 2 + 84.126 0.0 0.0 7.0307 7.0307 93.496 0.0 0.0 0.0 38.08500391586165 8.697114610913488 8.697114610913488 14.080510332627073 0 1.9534021960761263 1.154901959985743 1.7179001828205482 0.0 K{I|L}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}{M(Oxidation (M))|F}THE;K{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}THE;K{I|L}[DN]{[HG]|PP}{M(Oxidation (M))|F}THE;{M(Oxidation (M))|F}EK{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}T{[YC]|[HE]};K[{M(Oxidation (M))|F}E]{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}THE;K{I|L}{M(Oxidation (M))|F}T{M(Oxidation (M))|F}[{M(Oxidation (M))|F}E]HE;{M(Oxidation (M))|F}[K{I|L}]E{M(Oxidation (M))|F}{M(Oxidation (M))|F}T{[YC]|[HE]};{M(Oxidation (M))|F}T[VG]{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}T{[YC]|[HE]};{[ET]|[MV]}HT{M(Oxidation (M))|F}E{M(Oxidation (M))|F}[VS]T;{[YC]|[HE]}{[YC]|[HE]}{M(Oxidation (M))|F}{I|L}RET 7.0307;5.8539;4.1798;4.0534;3.8513;3.6979;3.5924;3.5354;3.531;3.2548 -;-;-;-;-;-;-;-;-;- 2240 + 1 1.52 93077.1 0.6499999761581421 2824 5505 8328 SUDHL4_400M_050219_2,8331 SUDHL4_400M_050219_2,8331,KLFEFMHET True False KLFEFMHET 45.011017 599.283923327923 1229529.75 8328.0 ENSG00000082898|ENST00000401558|XPO1;;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 8.181405226389566 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8332 45.015 229.0 230030.0 25 0 24594.0 + 1121 AGRLLLENY 9 82 524.79190532025 1047.5692577072998 2 524.7917358279228 MULTI CID FTMS 0 0 0 8328 140570.3125 0.5854791030198526 -4 0.1277885437011718 4 Unmodified _AGRLLLENY_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 34.40172386719151 0.1061884637610825 6 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}{I|L}ENY 8 2 + 54.105 0.0 0.0 5.1648 5.1648 86.347 0.0 0.0 0.0 3.979400086720375 34.67584314246004 3.979400086720375 9.262137858390815 0 0.8494850021680094 0.0 0.0 0.3494850021680094 {[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}{I|L}ENY;{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}{I|L}{I|L}EGGY 5.1648;4.2807 -;- 116 1 1.52 42556.5 1.0 2825 5505 8328 SUDHL4_400M_050219_2,8332 SUDHL4_400M_050219_2,8332,AGRLLLENY True True AGRLLLENY 45.015335 524.791735827923 1186300.125 8328.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 5.143110434214274 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8333 45.023 417.0 212880.0 25 0 41004.0 + -1 PGKVVCHRLR 10 81 611.3549955786652 1220.6954382241304 2 611.3550292849541 MULTI CID FTMS 0 0 0 8328 122980.4375 0.1946655335752529 -21 0.7774620056152344 5 Carbamidomethyl (C) _PGKVVC(Carbamidomethyl (C))HRLR_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 1.4819007175156935 0.719781833666733 6 {M(Oxidation (M))|F} 1 -1 9.5329 0.0 0.0 0.78094 0.0 0.0 1055.616472014949 0.0 1055.616472014949 0.0 4.928797804426948 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.78094 - 5 + 1 1.52 70016.1 1.0 2826 5505 8328 SUDHL4_400M_050219_2,8333 SUDHL4_400M_050219_2,8333,PGKVVCHRLR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8335 45.033 351.0 172760.0 25 0 35175.0 -1 EVLFLICKR 9 87 589.3425237759607 1176.6704946187212 2 589.3431884646416 MULTI CID FTMS 0 0 0 8334 203172.875 0.3374570557321741 7 -0.2031402587890625 1 Carbamidomethyl (C) _EVLFLIC(Carbamidomethyl (C))KR_ ENST00000263754.4_1_3:20195391-20195478:+|nuORF 1.844237919475145 0.850302753031785 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.52 48437.1 1.0 2827 5506 8334 SUDHL4_400M_050219_2,8335 SUDHL4_400M_050219_2,8335,EVLFLICKR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8336 45.046 758.0 106360.0 25 0 8144.9 + 2461 AQWDIGIAHA 10 113 541.2755694542203 1080.5365859752403 2 541.2762328982353 MULTI CID FTMS 0 0 0 8334 94588.234375 0.8165784259108132 -2 0.0536346435546875 2 Unmodified _AQWDIGIAHA_ ENSG00000147548|ENST00000317025|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;nc|ENSG00000147548|Q9BZ95-3|NSD3;nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3 41.8396318013385 0.1381409678234242 6 [C(Carbamidomethyl (C))K]PD{I|L}G{I|L}AHA 10 3 + 48.945 0.0 0.0 4.5297 4.5297 84.907 0.0 0.0 0.0 29.20379732162769 3.534087492996392 3.534087492996392 11.193477000175733 0 0.6549471895720985 0.0 0.0 0.0 [C(Carbamidomethyl (C))K]PD{I|L}G{I|L}AHA;[{I|L}A][EP]G{I|L}DP[QA]A;[C(Carbamidomethyl (C))K]PD{I|L}[Q{I|L}]HA;[C(Carbamidomethyl (C))K]PD{I|L}G[KT]Y;[C(Carbamidomethyl (C))K]PD{I|L}[HN]VV;[{I|L}T][PS]WAH[QA]A;[QA]WR[WH]PT;{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}AH[QA]A;{NN|[MP]|[D{I|L}]|[EV]}{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}H[QA]A;{NN|[MP]|[D{I|L}]|[EV]}{[VA]|[{I|L}G]}WAH[QA]A 4.5297;3.4938;2.7471;2.5505;1.9196;1.4959;1.4886;1.3401;1.2669;1.2245 -;-;-;-;-;-;-;-;-;- 631 + 1 1.52 66707.3 1.0 2828 5506 8334 SUDHL4_400M_050219_2,8336 SUDHL4_400M_050219_2,8336,AQWDIGIAHA False True AQWDIGIAHA 45.046133 541.276232898235 475437.28125 8334.0 nc|ENSG00000147548|Q9BZ95-3|NSD3;;nc|ENSG00000147548|Q9BZ95-4|NSD3;;ENSG00000147548|ENST00000317025|NSD3;;nc|ENSG00000147548|Q9BZ95-5|NSD3;;nc|ENSG00000147548|Q9BZ95-2|NSD3 6.849127451578776 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8337 45.06 800.0 28450.0 25 0 3826.0 -1 0 41 979.1177193209454 2934.331328563036 3 979.4539062380792 MULTI CID FTMS 0 0 0 8334 74562.3359375 1.0 0 0.0 3 6 D 1 -1 5.4846 0.0 0.0 0.18691 0.0 0.0 2610.152539355808 206.12092004947505 2816.273459405283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.18691 - 9 + 1 1.52 28253.1 0.3899999856948852 2829 5506 8334 SUDHL4_400M_050219_2,8337 SUDHL4_400M_050219_2,8337, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8339 45.065 130.0 186990.0 25 0 18700.0 + 15144 INVEEKLFK 9 49 560.3217780573636 1118.6290031815272 2 560.3223144412041 MULTI CID FTMS 0 0 0 8338 507063.71875 0.8817752822885975 -2 0.0721817016601562 1 Unmodified _INVEEKLFK_ REV__ENSG00000100167|ENST00000644076|SEPTIN3;REV__nc|ENSG00000100167|Q9UH03-2|SEPTIN3;REV__nc|ENSG00000100167|Q9UH03|SEPTIN3 1.844237919475145 0.850302753031785 6 C(Carbamidomethyl (C)) 1 -1 5.4846 0.0 0.0 0.49029 0.0 0.0 552.3340945895335 403.23456751041255 955.568662099946 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.49029 - 1 + 1 1.52 24344.0 1.0 2830 5507 8338 SUDHL4_400M_050219_2,8339 SUDHL4_400M_050219_2,8339,INVEEKLFK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8340 45.068 134.0 363220.0 25 0 69090.0 9302 FIFRVLAVW 9 74 575.8432141312703 1149.6718753293403 2 575.8432494997978 MULTI CID FTMS 0 0 0 8338 493690.28125 0.7617411284756593 -3 0.0908241271972656 2 Unmodified _FIFRVLAVW_ ENSG00000114859|ENST00000265593|CLCN2;ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-3|CLCN2;nc|ENSG00000114859|P51788-4|CLCN2;nc|ENSG00000114859|P51788-5|CLCN2 0.6014990680409731 0.8936861360942873 6 K 1 9 2.4743 0.0 0.0 0.21521 0.0 0.0 779.4523756728937 239.09266077213127 1018.545036445025 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.21521 - 3 + 1 1.52 40684.7 1.0 2831 5507 8338 SUDHL4_400M_050219_2,8340 SUDHL4_400M_050219_2,8340,FIFRVLAVW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8341 45.071 142.0 383070.0 25 0 66218.0 + + 20006 ILLGKVQQL 9 86 506.3314580194583 1010.6483631057166 2 506.3317443728447 MULTI CID FTMS 0 0 0 8338 260575.234375 0.8301296553756432 1 -0.02032470703125 3 Unmodified _LILRSPITV_ nc|ENSG00000141030|Q9UNS2-2|COPS3;ENSG00000141030|ENST00000268717|COPS3 37.97399986684836 0.0865783450051559 6 {I|L}{I|L}{I|L}G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K 7 -1 38.001 0.0 0.0 3.7601 0.0 0.0 0.0 223.145318853186 223.145318853186 25.527194418743804 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.4247425010840047 {I|L}{I|L}{I|L}G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}K 3.7601 - 267 + 1 1.52 44972.9 1.0 2832 5507 8338 SUDHL4_400M_050219_2,8341 SUDHL4_400M_050219_2,8341,LILRSPITV False False ILLGKVQQL 45.070764 506.331744372845 1517043.625 8338.0 nc|ENSG00000141030|Q9UNS2-2|COPS3;;ENSG00000141030|ENST00000268717|COPS3 2.6983559926350917 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8342 45.08 542.0 180430.0 25 0 32259.0 + 23787 LVDASGEFTE 10 108 534.2483787363532 1066.4822045395065 2 534.2473022341728 MULTI CID FTMS 0 0 0 8338 118371.0078125 0.1975618465583231 -7 0.2645683288574219 4 Unmodified _LVDASGEFTE_ REV__ENSG00000038427|ENST00000265077|VCAN;REV__ENST00000513016.5_1_5:82832752-82876250:+|nuORF;REV__nc|ENSG00000038427|P13611-2|VCAN;REV__nc|ENSG00000038427|P13611-5|VCAN 24.020572477871973 0.4289996903560794 6 {I|L}VDE[HT]DE 8 -1 55.175 0.0 0.0 5.1736 0.0 0.0 0.0 125.07225977115468 125.07225977115468 16.72843712902285 0.0 0.0 0.0 0 0.7302046884880937 2.0 0.805462187404089 0.0 {I|L}VDE[HT]DE 5.1736 - 939 + 1 1.52 82888.4 1.0 2833 5507 8338 SUDHL4_400M_050219_2,8342 SUDHL4_400M_050219_2,8342,LVDASGEFTE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8344 45.093 605.0 142190.0 25 0 21513.0 + -1 LLGMCLLTL 9 96 496.7796982528554 991.5448435725108 2 496.7799865603447 MULTI CID FTMS 0 0 0 8343 146002.875 0.2706633368934439 5 -0.1456260681152343 1 Oxidation (M) _LLGM(Oxidation (M))CLLTL_ REV__ENSG00000100060|ENST00000356998|MFNG;REV__nc|ENSG00000100060|O00587-2|MFNG 26.34127834903884 0.1960301806784604 6 C{I|L}{I|L}T{I|L} 5 -1 27.391 0.0 0.0 2.7624 0.0 0.0 430.22676284004064 0.0 430.22676284004064 0.0 11.906140654642812 0.0 0.0 0 0.8182503180159344 0.0 0.0 0.0 C{I|L}{I|L}T{I|L} 2.7624 + + 415 1 1.52 70533.4 1.0 2834 5508 8343 SUDHL4_400M_050219_2,8344 SUDHL4_400M_050219_2,8344,LLGMCLLTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8345 45.098 249.0 340490.0 25 0 38657.0 16569 KDFNRRIR 8 95 552.8233371237253 1103.6321213142503 2 552.8226196169853 MULTI CID FTMS 0 0 0 8343 160844.78125 0.8359194238608072 -6 0.1833763122558593 2 Unmodified _KDFNRRIR_ ENSG00000070961|ENST00000428670|ATP2B1;nc|ENSG00000070961|P20020-1|ATP2B1;nc|ENSG00000070961|P20020-2|ATP2B1;nc|ENSG00000070961|P20020-4|ATP2B1;nc|ENSG00000070961|P20020-5|ATP2B1;nc|ENSG00000070961|P20020-6|ATP2B1 2.302733041254933 0.8103549651115762 6 {I|L} 1 7 11.109 0.0 0.0 1.0066 0.0 0.0 972.5375606226474 0.0 972.5375606226474 0.0 10.140143618001218 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0066 + + 8 + 1 1.52 69426.7 1.0 2835 5508 8343 SUDHL4_400M_050219_2,8345 SUDHL4_400M_050219_2,8345,KDFNRRIR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8347 45.111 509.0 152500.0 25 0 15577.0 + 17099 KLFEFMHET 9 114 591.2861706416676 1180.557788350135 2 591.2859985232353 MULTI CID FTMS 0 0 0 8346 104516.109375 0.8580948701648442 1 -0.0350914001464843 1 Unmodified _KLFEFMHET_ ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 72.96794272382148 0.0199516581995792 6 K{I|L}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}M 6 3 61.271 0.0 0.0 5.19 0.0 0.0 0.0 382.1366586988958 382.1366586988958 23.468851933438778 0.0 0.0 0.0 0 1.325257498915995 0.9208187539523752 0.6694451763165201 0.0 + K{I|L}{M(Oxidation (M))|F}E{M(Oxidation (M))|F}M 5.19 + + 861 + 1 1.52 60983.5 1.0 2836 5509 8346 SUDHL4_400M_050219_2,8347 SUDHL4_400M_050219_2,8347,KLFEFMHET True True KLFEFMHET 45.110904 591.2865 379313.78125 8346.0 ENSG00000082898|ENST00000401558|XPO1;;ENST00000428210.5_1_2:61705957-61719950:-|nuORF 7.35142453511556 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8348 45.124 761.0 132330.0 25 0 17011.0 + 11686 GLFQGKTPL 9 104 480.7793163601931 959.5440797871862 2 480.7793456912041 MULTI CID FTMS 0 0 0 8346 89799.6953125 0.0892584931751002 -5 0.12890625 2 Unmodified _GLFQGKTPL_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 46.020951573049366 0.0490941689151868 6 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}Q[KG]TP{I|L} 9 0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F} + + 35.274 20.546 6.4779 3.6761 3.6761 53.162 0.0 0.0 0.0 0.0 17.354363737470457 0.0 0.0 0 0.7887254899964358 0.0 0.9634679910804403 0.3807196863200844 + + {[VA]|[{I|L}G]}{M(Oxidation (M))|F}Q[KG]TP{I|L} 3.6761 + + 409 + 1 1.52 80800.9 1.0 2837 5509 8346 SUDHL4_400M_050219_2,8348 SUDHL4_400M_050219_2,8348,GLFQGKTPL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8349 45.133 516.0 237730.0 25 0 111950.0 -1 0 101 492.2633443936126 491.2560679270126 1 492.2616760134697 MULTI CID FTMS 0 0 0 8346 120076.8984375 0.5435539711107839 -3 0.0752716064453125 3 6 {I|L} 1 -1 11.109 0.0 0.0 2.2614 0.0 0.0 360.16135464751886 0.0 360.16135464751886 0.0 1.4315336942163714 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.2614 - 23 + 1 1.52 102100.2 1.0 2838 5509 8346 SUDHL4_400M_050219_2,8349 SUDHL4_400M_050219_2,8349, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8351 45.144 444.0 182080.0 25 0 39681.0 + 18849 LASPHSPIL 9 111 467.77162695849336 933.5287009837868 2 467.7717773318291 MULTI CID FTMS 0 0 0 8350 191902.875 0.0229739266599206 23 -0.6364364624023438 1 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 36.04419817259434 0.0971720506436186 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L} 9 3 + 36.857 0.0 0.0 3.9482 3.9482 75.982 0.0 0.0 0.0 3.506571842859273 10.403624586739689 3.506571842859273 3.506571842859273 0 0.4247425010840047 0.0 1.1237125054200234 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};[PS]{I|L}AH[PS]{I|L}{I|L};[{I|L}A][PS]H[PS]{I|L}{I|L};[PS]H[{I|L}A][PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VPS[TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[VP][TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA][PS]{I|L}{I|L};{[TV]|[{I|L}S]}PAH[PS]{I|L}{I|L};[PS]H[VP][TA]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]{I|L}SP{I|L} 3.9482;3.5725;3.4621;3.4013;3.358;3.3362;3.2513;3.0039;2.7893;2.6417 -;-;+;-;-;-;-;-;-;- + 526 1 1.52 68306.3 1.0 2839 5510 8350 SUDHL4_400M_050219_2,8351 SUDHL4_400M_050219_2,8351,LASPHSPIL True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8352 45.153 509.0 153980.0 25 0 15137.0 + 17185 KLLDEAIQAV 10 115 550.3219558385173 1098.6293587438345 2 550.3218871951103 MULTI CID FTMS 0 0 0 8350 135395.5625 0.4892534169138534 -4 0.1103630065917968 2 Unmodified _KLLDEAIQAV_ ENSG00000069329|ENST00000299138|VPS35;ENST00000563984.1_1_16:46717374-46723045:-|nuORF;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENST00000569950.1_1_16:46715399-46723351:-|nuORF 51.41523569358685 0.0718446036348414 6 [{I|L}A]DE{I|L}K{I|L}QAV 10 4 + 75.633 0.0 0.0 6.8843 6.8843 81.029 0.0 0.0 0.0 0.7208642928302424 16.53212513775344 0.7208642928302424 0.7208642928302424 0 1.1861818737241734 1.0457574905606752 0.7742275032520141 0.4247425010840047 [{I|L}A]DE{I|L}K{I|L}QAV;{[VA]|[{I|L}G]}EE{I|L}K{I|L}QAV;{[QN]|[E{I|L}]|[KN]}GE{I|L}K{I|L}QAV;{NN|[MP]|[D{I|L}]|[EV]}AE{I|L}K{I|L}QAV;[{I|L}A]DE{I|L}K{I|L}[AG]AV;{[VA]|[{I|L}G]}EE{I|L}K{I|L}[AG]AV;{[QN]|[E{I|L}]|[KN]}GE{I|L}K{I|L}[AG]AV;{NN|[MP]|[D{I|L}]|[EV]}AE{I|L}K{I|L}[AG]AV;{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]EA{I|L}QAV;[QA][WR]K{I|L}QAV 6.8843;6.8187;6.2592;6.2064;6.0501;5.9845;5.425;5.3722;4.8614;4.4258 -;-;-;-;-;-;-;-;-;- 963 1 1.52 65980.3 1.0 2840 5510 8350 SUDHL4_400M_050219_2,8352 SUDHL4_400M_050219_2,8352,KLLDEAIQAV True True KLLDEAIQAV 45.152547 550.32188719511 1481416.875 8350.0 ENST00000563984.1_1_16:46717374-46723045:-|nuORF;;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;;ENSG00000069329|ENST00000299138|VPS35;;ENST00000569950.1_1_16:46715399-46723351:-|nuORF 6.976507822672526 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8353 45.166 800.0 79982.0 25 0 8147.3 -1 MPAELLLLLI 10 95 584.3564588316277 1166.6983647300551 2 584.3571655154228 MULTI CID FTMS 0 0 0 8350 110406.5703125 1.0 0 0.0 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MPAELLLLLI_ ENSG00000105737|ENST00000593562|GRIK5;nc|ENSG00000105737|Q16478-2|GRIK5 3.944395688203298 0.708391353636983 6 {M(Oxidation (M))|F} 1 -1 3.9794 0.0 0.0 0.34108 0.0 0.0 601.4357437357179 415.1984041803344 1016.6341479160524 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.34108 + + 31 + 1 1.52 55708.9 0.5199999809265137 2841 5510 8350 SUDHL4_400M_050219_2,8353 SUDHL4_400M_050219_2,8353,MPAELLLLLI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8355 45.172 161.0 304120.0 25 0 32864.0 + 19491 LFKLKDGVL 9 87 516.8258286262371 1031.6371043192742 2 517.3240234255791 MULTI CID FTMS 0 0 0 8354 240646.734375 0.1420403829712135 14 -0.42681884765625 1 Unmodified _LFKLKDGVL_ REV__ENSG00000130377|ENST00000588485|ACSBG2;REV__ENST00000591741.5_1_19:6161567-6190665:+|nuORF;REV__nc|ENSG00000130377|Q5FVE4-2|ACSBG2;REV__nc|ENSG00000130377|Q5FVE4-3|ACSBG2;REV__nc|ENSG00000130377|Q5FVE4-4|ACSBG2 12.531546534597751 0.4974689918368763 6 VG{I|L} 3 -1 19.041 0.0 0.0 1.8457 0.0 0.0 744.4525167722023 0.0 744.4525167722023 0.0 4.436974992327126 0.0 0.0 0 0.0 0.0 0.0 0.0 VG{I|L} 1.8457 - 107 + 1 1.52 42723.7 1.0 2842 5511 8354 SUDHL4_400M_050219_2,8355 SUDHL4_400M_050219_2,8355,LFKLKDGVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8356 45.185 738.0 143610.0 25 0 20736.0 42471 VTGLVHKW 8 135 470.2726087640627 938.5306645949254 2 470.2735778689384 MULTI CID FTMS 0 0 0 8354 112968.734375 0.5224191928311649 -3 0.0860710144042968 2 Unmodified _VTGLVHKW_ ENSG00000176715|ENST00000614302|ACSF3 5.230669730166228 0.792582437072536 6 {I|L} 1 7 8.6292 0.0 0.0 0.91944 0.0 0.0 807.435783468752 0.0 807.435783468752 0.0 0.4566506781360981 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.91944 + + 10 + 1 1.52 81181.3 1.0 2843 5511 8354 SUDHL4_400M_050219_2,8356 SUDHL4_400M_050219_2,8356,VTGLVHKW False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8357 45.19 294.0 185520.0 25 0 17382.0 22704 LQEYVQLQ 8 99 510.7721447565111 1019.5297365798224 2 510.7716552615166 MULTI CID FTMS 0 0 0 8354 111518.203125 0.7012547817749893 -1 0.0332221984863281 3 Unmodified _LQEYVQLQ_ ENSG00000150281|ENST00000279804|CTF1;nc|ENSG00000150281|Q16619-2|CTF1 32.30548876998284 0.3644845974844379 6 {[QN]|[E{I|L}]|[KN]}QYV 5 5 24.314 0.0 0.0 2.3848 0.0 0.0 0.0 384.1916988203098 384.1916988203098 10.334529848931291 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.5629529932484498 0.4247425010840047 {[QN]|[E{I|L}]|[KN]}QYV 2.3848 - 278 1 1.52 49117.7 1.0 2844 5511 8354 SUDHL4_400M_050219_2,8357 SUDHL4_400M_050219_2,8357,LQEYVQLQ False True FLASDVQQL 45.190257 510.771655261517 833317.1875 8354.0 nc|ENSG00000140995|Q6ZN54|DEF8;;ENSG00000140995|ENST00000563594|DEF8;;nc|ENSG00000140995|Q6ZN54-6|DEF8;;nc|ENSG00000140995|Q6ZN54-2|DEF8;;nc|ENSG00000140995|Q6ZN54-4|DEF8 3.3423314094543457 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8358 45.201 613.0 170670.0 25 0 21359.0 + 42495 VTKPLNVSW 9 136 522.2960489684534 1042.5775450037067 2 522.2958251833916 MULTI CID FTMS 0 0 0 8354 96363.671875 0.2370308002543999 -7 0.1972198486328125 4 Unmodified _VTKPLNVSW_ REV__ENST00000485406.1_1_X:69510136-69510301:+|nuORF 4.3292370932331545 0.7635526921153418 6 {I|L} 1 -1 9.7539 0.0 0.0 0.93556 0.0 0.0 911.4826333599552 0.0 911.4826333599552 0.0 1.3020607237785864 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.93556 + + 24 + 1 1.52 84911.2 1.0 2845 5511 8354 SUDHL4_400M_050219_2,8358 SUDHL4_400M_050219_2,8358,VTKPLNVSW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8360 45.207 103.0 538110.0 25 0 84847.0 + 33780 SLAVTPKRTD 10 81 544.3090786932663 1086.6036044533323 2 544.3094360232353 MULTI CID FTMS 0 0 0 8359 462888.15625 0.7930815718931141 6 -0.2127876281738281 1 Unmodified _SLAVTPKRTD_ REV__ENSG00000103091|ENST00000262144|WDR59;REV__nc|ENSG00000103091|Q6PJI9-2|WDR59 5.731851221503515 0.7001233259664787 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 7 1 1.52 47775.8 1.0 2846 5512 8359 SUDHL4_400M_050219_2,8360 SUDHL4_400M_050219_2,8360,SLAVTPKRTD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8361 45.212 270.0 161790.0 25 0 14592.0 + 16976 KIVDFSYSV 9 87 529.2819375729492 1056.5493222126984 2 529.2819091677666 MULTI CID FTMS 0 0 0 8359 206703.96875 0.2838734854277299 4 -0.14306640625 2 Unmodified _KIVDFSYSV_ ENSG00000156970|ENST00000287598|BUB1B;ENST00000453867.6_3_15:40509736-40545453:+|nuORF;nc|ENSG00000156970|O60566-2|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B 26.268140514670165 0.1969607489560049 6 D{M(Oxidation (M))|F}SY[VS] 6 3 32.893 0.0 0.0 3.1132 0.0 0.0 340.24714858222814 0.0 340.24714858222814 0.0 17.408037477650637 0.0 0.0 0 0.5 0.0 0.4247425010840047 0.0 + D{M(Oxidation (M))|F}SY[VS] 3.1132 + + 93 1 1.52 39202.8 1.0 2847 5512 8359 SUDHL4_400M_050219_2,8361 SUDHL4_400M_050219_2,8361,KIVDFSYSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8362 45.217 279.0 591630.0 25 0 61831.0 45696 YWRRWNRFCRR 11 86 849.939717293183 1697.864881653166 2 849.9409057497978 MULTI CID FTMS 0 0 0 8359 92911.6953125 1.0 0 0.0 3 Unmodified _YWRRWNRFCRR_ ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C 0.0 0.8751479354844584 6 {I|L}{I|L}GPS 5 11 31.674 0.0 0.0 1.8655 0.0 0.0 849.3441023954783 378.2221163385376 1227.5662187340158 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2376954943324543 0.0 {I|L}{I|L}GPS 1.8655 - 792 + 1 1.52 115568.5 1.0 2848 5512 8359 SUDHL4_400M_050219_2,8362 SUDHL4_400M_050219_2,8362,YWRRWNRFCRR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8363 45.222 255.0 218180.0 25 0 23365.0 + -1 KMQETLVGL 9 97 517.7822933354211 1033.550033737642 2 517.7822143435478 MULTI CID FTMS 0 0 0 8359 192523.265625 1.0 0 0.0 4 Oxidation (M) _KM(Oxidation (M))QETLVGL_ nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1;ENST00000469871.1_1_7:2249647-2255919:-|nuORF;ENSG00000002822|ENST00000265854|MAD1L1 25.399314129420983 0.2080152500878129 6 MVVG{I|L} 5 -1 30.578 0.0 0.0 2.9586 0.0 0.0 516.2764264151796 0.0 516.2764264151796 0.0 11.141303353600094 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 MVVG{I|L} 2.9586 - 187 + 1 1.52 47651.3 1.0 2849 5512 8359 SUDHL4_400M_050219_2,8363 SUDHL4_400M_050219_2,8363,KMQETLVGL False False KMQETLVGL 45.221959 517.782214343548 1148891.375 8359.0 nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1;;ENST00000469871.1_1_7:2249647-2255919:-|nuORF;;ENSG00000002822|ENST00000265854|MAD1L1 1.0157646934191389 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8364 45.226 209.0 268950.0 25 0 18602.0 + 14917 YVLEGLKSV 9 98 504.2959678344711 0 504.2948486208916 PEAK CID FTMS 0 0 0 8359 117404.171875 0.8372568510807479 -1 0.0345993041992187 5 Unmodified _ILLYEPLF_ ENSG00000107938|ENST00000356792|EDRF1;nc|ENSG00000107938|Q3B7T1-3|EDRF1;ENST00000525091.5_1_10:127408310-127436620:+|nuORF;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;nc|ENSG00000107938|Q3B7T1-5|EDRF1 15.768221252438446 0.4767174489346095 6 {I|L}K[WM]T 5 7 14.671 0.0 0.0 1.4575 0.0 0.0 262.13736344881346 82.06680475406483 344.2041682028783 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.5941876774005248 0.0 {I|L}K[WM]T 1.4575 - 132 + 1 1.52 49314.3 1.0 2850 5512 8359 SUDHL4_400M_050219_2,8364 SUDHL4_400M_050219_2,8364,ILLYEPLF False False YVLEGLKSV 45.225917 504.294848620892 2004329.25 8359.0 ENSG00000107938|ENST00000356792|EDRF1;;nc|ENSG00000107938|Q3B7T1-3|EDRF1;;ENST00000525091.5_1_10:127408310-127436620:+|nuORF;;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;;nc|ENSG00000107938|Q3B7T1-5|EDRF1 3.026281078656514 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8366 45.232 161.0 231820.0 25 0 55405.0 + 27351 PHSTFTPVL 9 63 499.7674133919658 997.5202738507317 2 499.7688476443291 MULTI CID FTMS 0 0 0 8365 272813.28125 0.8714156520975304 3 -0.1181106567382812 1 Unmodified _PHSTFTPVL_ REV__ENST00000261797.6_1_5:149933402-149933609:+|nuORF 23.1484247019978 0.2366544122328345 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{[ET]|[MV]}{[DS]|[MA]|[CV]|TT}{I|L}{I|L} 9 -1 + 40.876 0.0 0.0 4.0978 4.0978 78.511 0.0 0.0 0.0 5.642492736872597 35.18954998148708 5.642492736872597 6.020599913279618 0 0.9247425010840048 0.0 0.8494850021680094 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S{[ET]|[MV]}{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[NS][KC]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[C(Carbamidomethyl (C))K][KC]{I|L}{I|L} 4.0978;3.4942;2.419 -;-;- 83 1 1.52 35360.6 1.0 2851 5513 8365 SUDHL4_400M_050219_2,8366 SUDHL4_400M_050219_2,8366,PHSTFTPVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8367 45.239 388.0 129540.0 25 0 11826.0 28119 PPPAPSLLL 9 77 452.778757350978 903.542961768756 2 452.7790099978447 MULTI CID FTMS 0 0 0 8365 103695.796875 0.9596202255447644 -1 0.0249557495117187 2 Unmodified _PPPAPSLLL_ ENST00000264203.7_1_1:19665671-19665956:-|nuORF 26.34127834903884 0.1960301806784604 6 SP[KC]{I|L} 5 7 18.244 0.0 0.0 2.0192 0.0 0.0 357.2627016142623 0.0 357.2627016142623 0.0 12.614641923043468 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 SP[KC]{I|L} 2.0192 - 70 + 1 1.52 45188.1 1.0 2852 5513 8365 SUDHL4_400M_050219_2,8367 SUDHL4_400M_050219_2,8367,PPPAPSLLL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8368 45.25 677.0 73781.0 25 0 6335.4 + 23934 LVQQAKFEL 9 85 538.3089370992992 1074.6033212653983 2 538.3082153201103 MULTI CID FTMS 0 0 0 8365 94902.0078125 0.3574630605973466 -6 0.1659507751464843 3 Unmodified _LVQQAKFEL_ REV__ENST00000334504.11_2_X:107464528-107554015:-|nuORF 12.531546534597751 0.4974689918368763 6 [{I|L}V]QQE 5 -1 16.242 0.0 0.0 1.5114 0.0 0.0 0.0 474.26955596682336 474.26955596682336 2.7466856152283405 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [{I|L}V]QQE 1.5114 - 157 1 1.52 44574.3 1.0 2853 5513 8365 SUDHL4_400M_050219_2,8368 SUDHL4_400M_050219_2,8368,LVQQAKFEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8369 45.264 800.0 143630.0 25 0 28054.0 12730 GVMEAYYRSL 10 108 594.7918160007493 1187.5690790682986 2 594.7919189333916 MULTI CID FTMS 0 0 0 8365 89297.3046875 0.8181670140698281 -2 0.0595550537109375 4 Unmodified _GVMEAYYRSL_ ENSG00000139117|ENST00000331366|CPNE8;nc|ENSG00000139117|Q86YQ8-2|CPNE8 13.042465956692816 0.6287021003332052 6 {I|L}RD[MT]VRS{I|L} 9 7 33.298 0.0 0.0 2.8039 0.0 0.0 97.97653714163296 0.0 97.97653714163296 0.0 21.30851032587487 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.6861818737241735 {I|L}RD[MT]VRS{I|L} 2.8039 - 323 + 1 1.52 91197.3 0.4900000095367431 2854 5513 8365 SUDHL4_400M_050219_2,8369 SUDHL4_400M_050219_2,8369,GVMEAYYRSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8371 45.269 42.0 938030.0 25 0 226930.0 + -1 LMVKRATWI 9 44 567.3297394266125 1132.644925920025 2 567.3300048708916 MULTI CID FTMS 0 0 0 8370 1278901.25 0.8108285029493469 3 -0.1165084838867187 1 Oxidation (M) _LM(Oxidation (M))VKRATWI_ REV__ENST00000474254.5_1_7:129940682-129945790:+|nuORF 0.5247636613948944 0.8963649302248013 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 36703.5 1.0 2855 5514 8370 SUDHL4_400M_050219_2,8371 SUDHL4_400M_050219_2,8371,LMVKRATWI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8372 45.281 689.0 159500.0 25 0 10608.0 + 11784 GLLERVKEL 9 144 528.8240129948891 1055.6334730565782 2 528.8246337771416 MULTI CID FTMS 0 0 0 8370 100520.59375 0.6181718353962705 -3 0.0978317260742187 2 Unmodified _GLLERVKEL_ ENSG00000115677|ENST00000310931|HDLBP;ENST00000487169.5_1_2:242169444-242174670:-|nuORF;nc|ENSG00000115677|Q00341-2|HDLBP 59.36838082759317 0.0264317782606298 6 {I|L}G{I|L}ERV[{I|L}A]SV 10 6 + 67.476 0.0 0.0 6.3919 6.3919 86.907 0.0 0.0 0.0 48.33744784055135 3.000671555173824 3.000671555173824 7.148112479347319 0 1.3424778212679485 2.0 1.566901560044258 0.0 {I|L}G{I|L}ERV[{I|L}A]SV;{I|L}G{I|L}{I|L}G[R{I|L}]ESV;{I|L}G{I|L}{I|L}[RD][{I|L}A]SV;{[VA]|[{I|L}G]}{I|L}ERVKE{I|L};{[VA]|[{I|L}G]}{I|L}ERVS{[VA]|[{I|L}G]}{I|L};{I|L}G{I|L}{I|L}G[QP][{M(Oxidation (M))|F}V]{I|L};{[VA]|[{I|L}G]}{I|L}[TA]G{I|L}[W{I|L}]{I|L};{[VA]|[{I|L}G]}{I|L}[QT]{I|L}[W{I|L}]{I|L};{[VA]|[{I|L}G]}{I|L}[TA][{I|L}A]RE{I|L};[{I|L}V]AERVKE{I|L} 6.3919;5.7148;5.7123;5.4724;4.1481;4.1033;4.051;4.0025;3.7173;3.5456 -;-;-;+;-;-;-;-;-;- + 1832 + 1 1.52 87094.3 1.0 2856 5514 8370 SUDHL4_400M_050219_2,8372 SUDHL4_400M_050219_2,8372,GLLERVKEL True True GLLERVKEL 45.28133 528.824633777142 1043238.3125 8370.0 ENSG00000115677|ENST00000310931|HDLBP;;nc|ENSG00000115677|Q00341-2|HDLBP;;ENST00000487169.5_1_2:242169444-242174670:-|nuORF 3.14094877243042 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8373 45.295 800.0 97271.0 25 0 6078.5 + 20372 LLGPPPVGV 9 118 424.7653724968602 847.5161920605204 2 424.7656738162041 MULTI CID FTMS 0 0 0 8370 88141.8515625 0.8582454852214496 -1 0.0382766723632812 3 Unmodified _LLGPPPVGV_ ENSG00000148337|ENST00000372938|CIZ1;ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-2|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-5|CIZ1 45.7499826716795 0.0496882803020414 6 [VP]PA{I|L}P 6 7 21.512 0.0 0.0 2.5382 0.0 0.0 0.0 270.1472094767892 270.1472094767892 7.532571863140181 0.0 0.0 0.0 0 0.3807196863200844 0.7695510786217261 0.0 0.0 [VP]PA{I|L}P 2.5382 - 219 1 1.52 64904.0 0.9700000286102296 2857 5514 8370 SUDHL4_400M_050219_2,8373 SUDHL4_400M_050219_2,8373,LLGPPPVGV True True LLGPPPVGV 45.295148 424.765673816204 845032.1875 8370.0 ENST00000476727.6_1_9:130931703-130953136:-|nuORF;;nc|ENSG00000148337|Q9ULV3-2|CIZ1;;nc|ENSG00000148337|Q9ULV3-3|CIZ1;;ENSG00000148337|ENST00000372938|CIZ1;;nc|ENSG00000148337|Q9ULV3-4|CIZ1;;nc|ENSG00000148337|Q9ULV3-5|CIZ1 4.879426161448161 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8374 45.299 197.0 298680.0 25 0 20288.0 + -1 LASLCSNPF 9 101 504.74390507620905 1007.473257219218 2 504.7441894412041 MULTI CID FTMS 0 0 0 8370 170827.546875 1.0 0 0.0 4 Carbamidomethyl (C) _LASLC(Carbamidomethyl (C))SNPF_ REV__ENSG00000103056|ENST00000219334|SMPD3;REV__nc|ENSG00000103056|Q9NY59-2|SMPD3 8.593279151180031 0.6146971463335029 6 [C(Carbamidomethyl (C))Q]{I|L}C 4 -1 16.198 0.0 0.0 1.6078 0.0 0.0 0.0 500.2688082330688 500.2688082330688 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [C(Carbamidomethyl (C))Q]{I|L}C 1.6078 - 138 + 1 1.52 52010.3 1.0 2858 5514 8370 SUDHL4_400M_050219_2,8374 SUDHL4_400M_050219_2,8374,LASLCSNPF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8375 45.313 800.0 138340.0 25 0 20831.0 + 40874 VLQQESNFL 9 139 539.283088751603 1076.551624570006 2 539.2814819216728 MULTI CID FTMS 0 0 0 8370 147887.046875 0.5406576383891406 -4 0.1310539245605468 5 Unmodified _VLQQESNFL_ ENSG00000092853|ENST00000318121|CLSPN;nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN 52.268347100219714 0.0353964759249114 6 [{I|L}V]QQE[NS]{M(Oxidation (M))|F}{I|L} 9 0 + 75.181 0.0 0.0 6.9835 6.9835 84.281 0.0 0.0 0.0 19.754318085092635 16.478174818886373 16.478174818886373 2.768024924119672 0 0.5 2.0 0.75 0.3807196863200844 + + [{I|L}V]QQE[NS]{M(Oxidation (M))|F}{I|L};[{I|L}V]QQ{[QS]|[NT]}D{M(Oxidation (M))|F}{I|L};[{I|L}V]Q[AG]E[NS]{M(Oxidation (M))|F}{I|L};[{I|L}V][AG]QE[NS]{M(Oxidation (M))|F}{I|L};[{I|L}V]Q[AG]{[QS]|[NT]}D{M(Oxidation (M))|F}{I|L};[{I|L}V][AG]Q{[QS]|[NT]}D{M(Oxidation (M))|F}{I|L};[{I|L}V]NAAE[NS]{M(Oxidation (M))|F}{I|L};{I|L}{I|L}NQE[NS]{M(Oxidation (M))|F}{I|L};[{I|L}V]NAA{[QS]|[NT]}D{M(Oxidation (M))|F}{I|L};{I|L}{I|L}NQ{[QS]|[NT]}D{M(Oxidation (M))|F}{I|L} 6.9835;6.7264;6.1282;6.1282;5.8711;5.8711;5.1993;5.1486;4.9422;4.8914 +;-;-;-;-;-;-;-;-;- + 862 1 1.52 87739.8 0.6100000143051147 2859 5514 8370 SUDHL4_400M_050219_2,8375 SUDHL4_400M_050219_2,8375,VLQQESNFL True True VLQQESNFL 45.31274 539.281481921673 1774934.375 8370.0 ENSG00000092853|ENST00000318121|CLSPN;;nc|ENSG00000092853|Q9HAW4-2|CLSPN;;nc|ENSG00000092853|Q9HAW4-3|CLSPN 5.781818707784017 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8376 45.327 800.0 228010.0 25 0 64388.0 + 31044 RLIAQRYLL 9 112 573.3609962337864 1144.7074395343727 2 573.3611938357353 MULTI CID FTMS 0 0 0 8370 127454.7421875 0.8583830612874783 -1 0.0382766723632812 6 Unmodified _RLIAQRYLL_ ENSG00000041357|ENST00000044462|PSMA4;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4 43.85829265575387 0.0542763391141878 6 GV{I|L}{I|L} 4 7 33.382 0.0 0.0 2.9162 0.0 0.0 0.0 759.4165743463499 759.4165743463499 14.798480000691953 0.0 0.0 0.0 0 0.6382104921644451 0.8239087409443188 0.0 0.0 GV{I|L}{I|L} 2.9162 - 76 + 1 1.52 140865.5 0.5799999833106995 2860 5514 8370 SUDHL4_400M_050219_2,8376 SUDHL4_400M_050219_2,8376,RLIAQRYLL True True RLIAQRYLL 45.326571 573.361193835735 841766.6875 8370.0 ENSG00000041357|ENST00000044462|PSMA4;;ENST00000557929.5_1_15:78834269-78838932:+|nuORF;;nc|ENSG00000041357|P25789-2|PSMA4 1.929507037003835 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8378 45.331 104.0 470630.0 25 0 91272.0 + 23788 LVDASGEFTE 10 75 534.2483787363532 1066.4822045395065 2 534.2489501833916 MULTI CID FTMS 0 0 0 8377 421236.75 0.7030463937592552 1 -0.0174369812011718 1 Unmodified _LVDASGEFTE_ REV__ENSG00000038427|ENST00000265077|VCAN;REV__ENST00000513016.5_1_5:82832752-82876250:+|nuORF;REV__nc|ENSG00000038427|P13611-2|VCAN;REV__nc|ENSG00000038427|P13611-5|VCAN 14.838274106304384 0.5985701837916485 6 {I|L}VN 3 -1 48.94 0.0 0.0 4.5889 0.0 0.0 0.0 737.2782076471311 737.2782076471311 17.425296040778164 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}VN 4.5889 - 139 + 1 1.52 45047.6 1.0 2861 5515 8377 SUDHL4_400M_050219_2,8378 SUDHL4_400M_050219_2,8378,LVDASGEFTE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8379 45.334 155.0 299350.0 25 0 58158.0 + 32326 RYKQKIVLC 9 68 575.8432141312703 1149.6718753293403 2 575.8431884646416 MULTI CID FTMS 0 0 0 8377 438926.6875 0.6772434519224863 5 -0.1592674255371093 2 Unmodified _RYKQKIVLC_ REV__ENST00000524717.5_1_11:95711383-95711476:-|nuORF 2.059750862983233 0.8427793054688888 6 K 1 -1 1.5938 0.0 0.0 0.13863 0.0 0.0 735.4249403701593 283.1192721002563 1018.5442124704156 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.13863 + + 2 + 1 1.52 41369.4 1.0 2862 5515 8377 SUDHL4_400M_050219_2,8379 SUDHL4_400M_050219_2,8379,RYKQKIVLC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8380 45.337 124.0 282930.0 25 0 16465.0 + 14264 KAMELIREL 9 68 560.3217780573636 1118.6290031815272 2 560.3208495974541 MULTI CID FTMS 0 0 0 8377 355834.84375 0.6187908110824094 6 -0.1776313781738281 3 Unmodified _IEFSLLRLE_ ENSG00000101003|ENST00000262460|GINS1;ENST00000484893.1_1_20:25388456-25391762:+|nuORF 6.2057823575117 0.6980434486082533 6 KA{M(Oxidation (M))|F} 3 8 17.167 0.0 0.0 1.5346 0.0 0.0 0.0 769.4258516900999 769.4258516900999 6.19788758288394 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 KA{M(Oxidation (M))|F} 1.5346 - 28 + 1 1.52 29661.8 1.0 2863 5515 8377 SUDHL4_400M_050219_2,8380 SUDHL4_400M_050219_2,8380,IEFSLLRLE False False KAMELIREL 45.33705 560.320849597454 1467814.5 8377.0 ENSG00000101003|ENST00000262460|GINS1;;ENST00000484893.1_1_20:25388456-25391762:+|nuORF -0.3373368382453918 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8381 45.344 389.0 191230.0 25 0 34969.0 16858 KIERKFPPY 9 95 589.3425237759607 1176.6704946187212 2 589.3426391482353 MULTI CID FTMS 0 0 0 8377 255019.359375 0.4235707260105106 16 -0.3851852416992187 4 Unmodified _KIERKFPPY_ ENSG00000183690|ENST00000420999|EFHC2 1.844237919475145 0.850302753031785 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 59708.3 1.0 2864 5515 8377 SUDHL4_400M_050219_2,8381 SUDHL4_400M_050219_2,8381,KIERKFPPY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8383 45.353 279.0 247410.0 25 0 16151.0 + 43465 WVDETLSSV 9 124 518.2529526100128 1034.4913522868255 2 518.2540771365166 MULTI CID FTMS 0 0 0 8382 163589.390625 0.6505939982067486 -2 0.079833984375 1 Unmodified _WVDETLSSV_ ENSG00000104517|ENST00000520539|UBR5;nc|ENSG00000104517|O95071-2|UBR5 42.09456458481378 0.0639583784996157 6 {[RE]|[WV]}DET{I|L}SSV 9 0 {[RE]|[WV]}DET{I|L} + + 19.503 19.782 2.6612 1.8853 1.8853 50.307 0.0 0.0 0.0 0.0 8.083248438670964 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 + + {[RE]|[WV]}DET{I|L}SSV 1.8853 + + 269 + 1 1.52 59614.5 1.0 2865 5516 8382 SUDHL4_400M_050219_2,8383 SUDHL4_400M_050219_2,8383,WVDETLSSV True True WVDETLSSV 45.353056 518.254077136517 1385976.75 8382.0 nc|ENSG00000104517|O95071-2|UBR5;;ENSG00000104517|ENST00000520539|UBR5 5.262784798940023 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8384 45.367 800.0 73792.0 25 0 11961.0 + 17990 KRRRRSQAH 9 84 597.8561619774339 1193.6977710216677 2 597.8561889529228 MULTI CID FTMS 0 0 0 8382 84999.65625 0.3799275103759391 19 -0.4473304748535156 2 Unmodified _KRRRRSQAH_ REV__ENSG00000188089|ENST00000696112|PLA2G4E;REV__nc|ENSG00000188089|Q3MJ16|PLA2G4E 1.844237919475145 0.850302753031785 6 {I|L} 1 -1 9.1487 0.0 0.0 0.76642 0.0 0.0 1062.6025542021348 0.0 1062.6025542021348 0.0 7.554897609903151 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.76642 - 5 + 1 1.52 50741.4 0.4799999892711639 2866 5516 8382 SUDHL4_400M_050219_2,8384 SUDHL4_400M_050219_2,8384,KRRRRSQAH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8385 45.381 800.0 177290.0 25 0 10404.0 + 16509 KAMELIREL 9 163 551.8188337085753 1101.6231144839503 2 551.8179199099541 MULTI CID FTMS 0 0 0 8382 120709.5703125 0.8752133112326865 1 -0.0366744995117187 3 Unmodified _KAMELIREL_ ENSG00000101003|ENST00000262460|GINS1;ENST00000484893.1_1_20:25388456-25391762:+|nuORF 27.22323531849824 0.1848086127304535 6 KAME{I|L}{I|L}RE{I|L} 9 0 + 54.776 0.0 0.0 4.9723 4.9723 83.028 0.0 0.0 0.0 19.00013368716041 6.356603226686701 6.356603226686701 8.543611822468229 0 1.2713701378068183 0.0 0.0 0.25 + + KAME{I|L}{I|L}RE{I|L};KAME{I|L}{I|L}[W{I|L}]V;K{I|L}[DC]{I|L}{I|L}RE{I|L};{I|L}K[DC]{I|L}{I|L}RE{I|L};{I|L}{M(Oxidation (M))|F}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DV[RP];{I|L}{M(Oxidation (M))|F}VWWV[RP];{I|L}{M(Oxidation (M))|F}V{[SA]|[TG]}VDV[RP];{I|L}{M(Oxidation (M))|F}A[VS]VDV[RP];K{I|L}[DC]{I|L}{I|L}[W{I|L}]V;K{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}NVDV[RP] 4.9723;4.1968;2.6308;2.0403;2.0345;1.8795;1.8603;1.8603;1.8552;1.7005 +;-;-;-;-;-;-;-;-;- + 349 + 1 1.52 109194.5 0.5400000214576721 2867 5516 8382 SUDHL4_400M_050219_2,8385 SUDHL4_400M_050219_2,8385,KAMELIREL False True KAMELIREL 45.380719 551.817919909954 494984.0 8382.0 ENSG00000101003|ENST00000262460|GINS1;;ENST00000484893.1_1_20:25388456-25391762:+|nuORF 5.244934717814128 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8387 45.386 107.0 474250.0 25 0 69966.0 + 11687 GLFQGKTPL 9 85 480.7793163601931 959.5440797871862 2 480.7793456912041 MULTI CID FTMS 0 0 0 8386 496547.34375 0.4935547669620444 3 -0.1051559448242187 1 Unmodified _GLFQGKTPL_ ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2 54.773552608820026 0.0299037012502309 6 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}Q[KG]TP{I|L} 9 0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F} + + 37.797 19.666 6.2003 3.939 3.939 53.933 0.0 0.0 0.0 0.0 22.619478172486467 0.0 0.0 0 0.8252574989159953 0.0 1.1307196863200843 0.4247425010840047 + + {[VA]|[{I|L}G]}{M(Oxidation (M))|F}Q[KG]TP{I|L} 3.939 + + 211 + 1 1.52 45981.6 1.0 2868 5517 8386 SUDHL4_400M_050219_2,8387 SUDHL4_400M_050219_2,8387,GLFQGKTPL True True GLFQGKTPL 45.385516 480.779345691204 10168102.0 8386.0 ENSG00000088325|ENST00000300403|TPX2;;nc|ENSG00000088325|Q9ULW0-2|TPX2 5.938956578572591 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8388 45.39 242.0 255780.0 25 0 25586.0 + 1409 ALDDIIYRA 9 98 525.2840959779339 1048.5536390226678 2 525.2841674685478 MULTI CID FTMS 0 0 0 8386 127487.03125 0.5195968766249005 -2 0.0541114807128906 2 Unmodified _ALDDIIYRA_ ENSG00000122591|ENST00000432176|HYCC1;nc|ENSG00000122591|Q9BYI3-3|HYCC1 32.78568957990786 0.1150597335874693 6 [{I|L}A]DD{I|L}[YR]A{I|L} 9 2 + 69.319 0.0 0.0 6.6109 6.6109 81.077 0.0 0.0 0.0 17.191512336730028 1.2371250542002343 1.2371250542002343 1.2371250542002343 0 1.6989700043360187 2.0 0.4247425010840047 0.0 [{I|L}A]DD{I|L}[YR]A{I|L};[{I|L}A]DD{I|L}{I|L}{[QV]|[N{I|L}]|[RA]|[KV]}Y;[{I|L}A]D[KP][KQ]SY 6.6109;6.493;4.0599 -;-;- 165 + 1 1.52 50631.3 1.0 2869 5517 8386 SUDHL4_400M_050219_2,8388 SUDHL4_400M_050219_2,8388,ALDDIIYRA True True ALDDIIYRA 45.390381 525.284167468548 1050309.125 8386.0 nc|ENSG00000122591|Q9BYI3-3|HYCC1;;ENSG00000122591|ENST00000432176|HYCC1 5.550853411356608 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8389 45.4 543.0 152360.0 25 0 9837.5 + 35117 SQWEDIHVV 9 126 556.7715944535573 1111.5286359739146 2 556.7721435427666 MULTI CID FTMS 0 0 0 8386 93092.0390625 0.5285955672747372 -2 0.0541114807128906 3 Unmodified _SQWEDIHVV_ ENSG00000075884|ENST00000295095|ARHGAP15;ENST00000549436.5_1_2:144276854-144461094:+|nuORF 60.38955033654506 0.025866396858536 6 {[QS]|[NT]}WED{I|L}HVV 9 0 + 43.075 0.0 0.0 3.8752 3.8752 80.715 0.0 0.0 0.0 8.514195019452082 6.700236701755316 6.700236701755316 9.208187539523742 0 0.5 0.8538719643217619 0.3494850021680094 0.0 + + {[QS]|[NT]}WED{I|L}HVV;{[QS]|[NT]}{[DA]|[EG]}ED{I|L}HVV;[HV]EEVVS[WQ];[HV]EVEVS[WQ];{NN|[MP]|[D{I|L}]|[EV]}HEWV[WK];[HV]{I|L}DEVS[WQ];[HV]EE{[DA]|[EG]}V[WK];{NN|[MP]|[D{I|L}]|[EV]}HEVVS[WQ];{NN|[MP]|[D{I|L}]|[EV]}HEVW[WK];{NN|[MP]|[D{I|L}]|[EV]}HVEVS[WK] 3.8752;3.0468;2.418;2.3308;2.2513;2.2184;1.9728;1.8632;1.8221;1.776 +;-;-;-;-;-;-;-;-;- + 658 + 1 1.52 67935.5 1.0 2870 5517 8386 SUDHL4_400M_050219_2,8389 SUDHL4_400M_050219_2,8389,SQWEDIHVV True True SQWEDIHVV 45.399931 556.772143542767 772368.625 8386.0 ENSG00000075884|ENST00000295095|ARHGAP15;;ENST00000549436.5_1_2:144276854-144461094:+|nuORF 6.220877965291341 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8390 45.414 800.0 27830.0 25 0 1890.1 + 12897 GWGGGHGG 8 60 684.2855709726258 683.2782945060258 1 684.2860595583916 MULTI CID FTMS 0 0 0 8386 142815.671875 0.4879579041552376 -2 0.0541114807128906 4 Unmodified _GWGGGHGG_ REV__ENST00000504087.5_1_4:125632412-125633877:-|nuORF;REV__ENST00000515641.1_1_4:125600034-125633877:-|nuORF 0.0 0.8243325171867699 6 T 1 -1 3.9794 0.0 0.0 0.5824 0.0 0.0 325.2578569167069 253.95411096744377 579.2119678841507 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.5824 - 3 + 1 1.52 22563.8 0.5899999737739563 2871 5517 8386 SUDHL4_400M_050219_2,8390 SUDHL4_400M_050219_2,8390,GWGGGHGG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8392 45.422 307.0 172830.0 25 0 33938.0 18850 LASPHSPIL 9 86 467.77162695849336 933.5287009837868 2 467.7717773318291 MULTI CID FTMS 0 0 0 8391 98939.671875 0.0118447040744588 31 -0.908111572265625 1 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 23.1484247019978 0.2366544122328345 6 {I|L}{I|L} 2 7 22.959 0.0 0.0 2.4594 0.0 0.0 689.3493472013633 0.0 689.3493472013633 0.0 13.28109011957534 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 2.4594 + + 89 + 1 1.52 46249.2 1.0 2872 5518 8391 SUDHL4_400M_050219_2,8392 SUDHL4_400M_050219_2,8392,LASPHSPIL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8393 45.431 509.0 149670.0 25 0 13115.0 + 12224 GQVGGFINY 9 118 477.7379031141647 953.4612532951294 2 477.7378723025322 MULTI CID FTMS 0 0 0 8391 162251.5625 0.648255124889979 -2 0.0697212219238281 2 Unmodified _GQVGGFINY_ ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE 28.486842064014134 0.1687311288560894 6 {[QG]|[NA]}{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}NY 8 2 {[QG]|[NA]}{[NV]|[RG]}{M(Oxidation (M))|F}{I|L} + + 15.261 14.796 2.2475 1.6006 1.6006 50.066 0.0 0.0 0.0 0.0 -5.019718135043895 -5.019718135043895 0.0 0 0.0 0.0 0.0 0.3807196863200844 {[QG]|[NA]}{[NV]|[RG]}{M(Oxidation (M))|F}{I|L}NY 1.6006 - 177 + 1 1.52 61552.6 1.0 2873 5518 8391 SUDHL4_400M_050219_2,8393 SUDHL4_400M_050219_2,8393,GQVGGFINY False True GQVGGFINY 45.43087 477.737872302532 1260119.875 8391.0 nc|ENSG00000138778|Q02224-3|CENPE;;ENSG00000138778|ENST00000265148|CENPE 3.70347515741984 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8394 45.445 800.0 100830.0 25 0 16921.0 + 35311 SSRRRRPRAP 10 83 619.8688254335004 1237.7230979338008 2 619.8696166872978 MULTI CID FTMS 0 0 0 8391 107095.703125 0.4950730154373432 -8 0.280609130859375 3 Unmodified _SSRRRRPRAP_ REV__ENST00000402690.6_3_18:45423134-45457349:-|nuORF 3.5964929083625545 0.7100006075494749 6 {I|L} 1 -1 4.6041 0.0 0.0 0.37198 0.0 0.0 618.3690462754008 503.2537020318969 1121.6227483072978 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.37198 - 24 + 1 1.52 66089.5 0.5400000214576721 2874 5518 8391 SUDHL4_400M_050219_2,8394 SUDHL4_400M_050219_2,8394,SSRRRRPRAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8395 45.459 800.0 48792.0 25 0 4142.9 -1 0 46 1011.1428594766174 3030.406749030052 3 1011.478564441204 MULTI CID FTMS 0 0 0 8391 109341.25 1.0 0 0.0 4 6 G 1 -1 6.9897 0.0 0.0 0.23065 0.0 0.0 1750.8013545982146 1219.5576876276002 2970.359042225815 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.23065 - 11 + 1 1.52 36258.4 0.449999988079071 2875 5518 8391 SUDHL4_400M_050219_2,8395 SUDHL4_400M_050219_2,8395, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8397 45.465 127.0 430290.0 25 0 61588.0 + 8578 ETRAQLVGVA 10 83 522.2960489684534 1042.5775450037067 2 522.2961913943291 MULTI CID FTMS 0 0 0 8396 392421.15625 0.9652589912031556 1 -0.0273017883300781 1 Unmodified _ETRAQLVGVA_ REV__ENST00000292524.5_1_8:145748479-145748992:+|nuORF 3.944395688203298 0.708391353636983 6 N 1 -1 1.42 0.0 0.0 0.1362 0.0 0.0 840.4814279156193 85.03023706607655 925.5116649816958 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.1362 - 13 + 1 1.52 45641.9 1.0 2876 5519 8396 SUDHL4_400M_050219_2,8397 SUDHL4_400M_050219_2,8397,ETRAQLVGVA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8398 45.467 89.0 444220.0 25 0 40784.0 + 11943 GMQIPSTQF 9 79 512.741932139365 1023.46931134553 2 512.7421142458916 MULTI CID FTMS 0 0 0 8396 475375.25 1.0 0 0.0 2 Oxidation (M) _GM(Oxidation (M))QIPSTQF_ ENSG00000168036|ENST00000349496|CTNNB1 43.85829265575387 0.0542763391141878 6 [QT]C{I|L}P 5 7 25.19 0.0 0.0 2.4612 0.0 0.0 0.0 478.1931021992987 478.1931021992987 0.3590103752768137 0.0 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.3494850021680094 [QT]C{I|L}P 2.4612 - 110 1 1.52 36743.5 1.0 2877 5519 8396 SUDHL4_400M_050219_2,8398 SUDHL4_400M_050219_2,8398,GMQIPSTQF True False GMQIPSTQF 45.467047 512.742114245892 9311984.0 8396.0 ENSG00000168036|ENST00000349496|CTNNB1 7.927199363708496 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8399 45.472 268.0 299050.0 25 0 89436.0 + 30956 RKSSGLLR 8 68 458.7881170313744 915.5616811295488 2 458.7883483767509 MULTI CID FTMS 0 0 0 8396 187847.71875 0.1382085851124333 -9 0.3254165649414062 3 Unmodified _RKSSGLLR_ REV__ENST00000555401.5_1_14:88852083-88883103:+|nuORF 0.6903765706972694 0.8201419426409876 6 P 1 -1 0.9691 0.0 0.0 0.10585 0.0 0.0 695.4299805453677 120.05108057193593 815.4810611173036 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.10585 - 2 + 1 1.52 67092.0 1.0 2878 5519 8396 SUDHL4_400M_050219_2,8399 SUDHL4_400M_050219_2,8399,RKSSGLLR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8400 45.486 800.0 120600.0 25 0 16041.0 + 1400 ALATLIHQV 9 126 483.2925406567899 964.57052838038 2 483.2924987673759 MULTI CID FTMS 0 0 0 8396 95077.875 0.2216962382658258 -5 0.1943626403808593 4 Unmodified _ALATLIHQV_ ENSG00000111652|ENST00000543155|COPS7A 68.08070601005525 0.0218408846571049 6 [{I|L}A]AT{I|L}{I|L}HN{I|L} 9 2 + 80.121 0.0 0.0 8.3063 8.3063 89.063 0.0 0.0 0.0 27.147642715192504 5.006023505691857 5.006023505691857 5.006023505691857 0 1.079689690656103 2.0 0.4247425010840047 0.6694451763165201 [{I|L}A]AT{I|L}{I|L}HN{I|L};[{I|L}A]AT{I|L}{I|L}HQV;[{I|L}A]AT{I|L}{I|L}HGG{I|L};[{I|L}A]AT{I|L}{I|L}H[AG]V;[{I|L}A]T{I|L}HGAVA{I|L};[{I|L}A]AT[HV]AVA{I|L};[{I|L}A]T{I|L}HQVA{I|L};[{I|L}A]TA[HV]AVA{I|L};[H{I|L}]{I|L}TAGAVA{I|L};[TA]{I|L}{I|L}HGAVA{I|L} 8.3063;7.7874;6.6577;6.1387;4.9902;4.9379;4.625;4.4784;2.6124;2.5462 -;+;-;-;-;-;-;-;-;- + 666 + 1 1.52 76579.9 0.9900000095367432 2879 5519 8396 SUDHL4_400M_050219_2,8400 SUDHL4_400M_050219_2,8400,ALATLIHQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8402 45.492 184.0 232380.0 25 0 41574.0 + 20284 LLDVGGVIVK 10 64 506.8236345413768 1011.6327161495536 2 506.8237487673759 MULTI CID FTMS 0 0 0 8401 356799.5 0.3771963701405786 4 -0.0917320251464843 1 Unmodified _LLDVGGVIVK_ REV__ENSG00000131437|ENST00000403231|KIF3A;REV__ENST00000487055.1_1_5:132036305-132039285:-|nuORF;REV__nc|ENSG00000131437|Q9Y496|KIF3A 12.240655878213236 0.6421556946785427 6 {I|L}{I|L} 2 -1 44.776 0.0 0.0 4.4261 0.0 0.0 0.0 782.4410016884499 782.4410016884499 31.58870936703728 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L} 4.4261 + + 63 + 1 1.52 41445.4 1.0 2880 5520 8401 SUDHL4_400M_050219_2,8402 SUDHL4_400M_050219_2,8402,LLDVGGVIVK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8403 45.499 372.0 207200.0 25 0 31701.0 + 19279 LEKQKQNLS 9 106 544.3090786932663 1086.6036044533323 2 544.3096191287041 MULTI CID FTMS 0 0 0 8401 161721.578125 0.2770829230703827 14 -0.3014335632324219 2 Unmodified _LEKQKQNLS_ REV__ENSG00000078177|ENST00000261435|N4BP2;REV__nc|ENSG00000078177|Q86UW6-2|N4BP2 8.745405648335112 0.6093864874670651 6 {I|L}{I|L}[WM][H{I|L}]Q{M(Oxidation (M))|F} 8 -1 {I|L}{I|L}[WM][H{I|L}]Q + + 9.6041 -7.0866 -0.769 0.88386 0.88386 49.922 0.0 0.0 0.0 0.0 -9.859856381998782 -9.859856381998782 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}[WM][H{I|L}]Q{M(Oxidation (M))|F} 0.88386 - 73 + 1 1.52 62422.4 1.0 2881 5520 8401 SUDHL4_400M_050219_2,8403 SUDHL4_400M_050219_2,8403,LEKQKQNLS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8404 45.504 304.0 134700.0 25 0 13706.0 37709 TLPPHIKSTV 10 68 546.8226809009476 1091.630808868695 2 546.8229858279228 MULTI CID FTMS 0 0 0 8401 202675.28125 1.0 0 0.0 3 Unmodified _TLPPHIKSTV_ ENSG00000108510|ENST00000397786|MED13 3.5964929083625545 0.7100006075494749 6 T 1 9 0.088644 0.0 0.0 0.0081203 0.0 0.0 905.4938440022872 82.06685815982655 987.560702162114 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + T 0.0081203 + + 5 + 1 1.52 40127.5 1.0 2882 5520 8401 SUDHL4_400M_050219_2,8404 SUDHL4_400M_050219_2,8404,TLPPHIKSTV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8406 45.511 218.0 241530.0 25 0 35605.0 + 33562 SILSEVQQA 9 84 487.7610800509965 973.507607168793 2 487.7616454958916 MULTI CID FTMS 0 0 0 8405 259484.453125 0.6335026157199544 -4 0.1235198974609375 1 Unmodified _SILSEVQQA_ ENSG00000143799|ENST00000366794|PARP1;ENST00000490921.5_1_1:226555150-226558263:-|nuORF 67.34385681178166 0.0221257235307089 6 {[TV]|[{I|L}S]}EVT 5 5 37.179 0.0 0.0 3.8191 0.0 0.0 0.0 441.2111343506868 441.2111343506868 19.77239980344548 0.0 0.0 0.0 0 0.0 2.0 0.9476212463643424 0.0 {[TV]|[{I|L}S]}EVT 3.8191 - 289 1 1.52 46264.9 1.0 2883 5521 8405 SUDHL4_400M_050219_2,8406 SUDHL4_400M_050219_2,8406,SILSEVQQA True True SILSEVQQA 45.510897 487.761645495892 1655517.875 8405.0 ENST00000490921.5_1_1:226555150-226558263:-|nuORF;;ENSG00000143799|ENST00000366794|PARP1 5.810751279195149 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8407 45.525 800.0 51960.0 25 0 3316.8 -1 0 69 969.1153104782752 2904.3241020350256 3 969.785205066204 MULTI CID FTMS 0 0 0 8405 106319.5 1.0 0 0.0 2 6 QQA{I|L}V 5 -1 18.672 0.0 0.0 0.64291 0.0 0.0 1937.825641196938 424.18161951236567 2362.007260709304 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QQA{I|L}V 0.64291 - 141 + 1 1.52 37641.8 0.4300000071525574 2884 5521 8405 SUDHL4_400M_050219_2,8407 SUDHL4_400M_050219_2,8407, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8408 45.528 153.0 400940.0 25 0 91112.0 + 14763 ILDISEHTL 9 75 520.7846425453353 1039.5547321574704 2 520.7850219607353 MULTI CID FTMS 0 0 0 8405 423717.15625 1.0 0 0.0 3 Unmodified _ILDISEHTL_ ENSG00000006634|ENST00000265728|DBF4 64.23631603340823 0.0237365939569086 6 {I|L}{I|L}D{I|L}SE 6 3 75.923 0.0 0.0 7.3034 0.0 0.0 0.0 366.17836868493737 366.17836868493737 48.48304000566088 0.0 0.0 0.0 0 0.8494850021680094 2.0 1.2302046884880935 0.0 + {I|L}{I|L}D{I|L}SE 7.3034 + + 412 + 1 1.52 52020.1 1.0 2885 5521 8405 SUDHL4_400M_050219_2,8408 SUDHL4_400M_050219_2,8408,ILDISEHTL True True ILDISEHTL 45.527797 520.785021960735 2037239.375 8405.0 ENSG00000006634|ENST00000265728|DBF4 3.972781578699748 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8409 45.531 145.0 196190.0 25 0 15288.0 + 13474 HLWNSIHGL 9 70 538.3089370992992 1074.6033212653983 2 538.3089477419853 MULTI CID FTMS 0 0 0 8405 237225.3125 0.8935457553748686 2 -0.069305419921875 4 Unmodified _HLTLDGLPPL_ ENSG00000188554|ENST00000590996|NBR1;nc|ENSG00000188554|Q14596-2|NBR1 7.289230182591677 0.6929195370588109 6 {I|L} 1 9 11.783 0.0 0.0 1.0965 0.0 0.0 943.5082875513344 0.0 943.5082875513344 0.0 4.793036574208873 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.0965 + + 27 + 1 1.52 28648.9 1.0 2886 5521 8405 SUDHL4_400M_050219_2,8409 SUDHL4_400M_050219_2,8409,HLTLDGLPPL False False HLWNSIHGL 45.530709 538.308947741985 851831.3125 8405.0 ENSG00000188554|ENST00000590996|NBR1;;nc|ENSG00000188554|Q14596-2|NBR1 1.8217327694098155 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8410 45.537 352.0 132750.0 25 0 12216.0 + -1 VVGPSSVLTY 10 91 511.2826912606624 510.2754147940624 1 511.2814819216728 MULTI CID FTMS 0 0 0 8405 120027.515625 0.8529223826476303 -4 0.1235198974609375 5 ENSG00000110777|ENST00000393067|POU2AF1 6 {[QN]|[E{I|L}]|[KN]}H{I|L} 4 -1 + 26.955 0.0 0.0 5.2825 5.2825 80.667 0.0 0.0 0.0 3.4859945921845537 10.845850974183335 3.4859945921845537 3.767507096020992 0 0.0 1.154901959985743 0.0 0.0 {[QN]|[E{I|L}]|[KN]}H{I|L};[H{I|L}]E{I|L};{I|L}[NP][PA] 5.2825;4.5441;0.42419 -;-;- 58 1 1.52 42343.1 1.0 2887 5521 8405 SUDHL4_400M_050219_2,8410 SUDHL4_400M_050219_2,8410, False False VVGPSSVLTY 45.537084 511.281481921673 1432114.5 8405.0 ENSG00000110777|ENST00000393067|POU2AF1 2.020595888296763 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8412 45.543 73.0 629760.0 25 0 134980.0 + -1 VQVKRMIML 9 68 567.3297394266125 1132.644925920025 2 567.3299438357353 MULTI CID FTMS 0 0 0 8411 784422.25 0.4973268410267473 11 -0.2325057983398437 1 Oxidation (M) _VQVKRM(Oxidation (M))IML_ REV__ENST00000489282.1_1_1:59158492-59165724:-|nuORF 2.059750862983233 0.8427793054688888 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 40434.6 1.0 2888 5522 8411 SUDHL4_400M_050219_2,8412 SUDHL4_400M_050219_2,8412,VQVKRMIML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8413 45.553 616.0 159290.0 25 0 15752.0 34037 SLKPRVVDF 9 120 530.8094071902635 1059.604261447327 2 530.8082763552666 MULTI CID FTMS 0 0 0 8411 112030.2734375 0.7363076897482483 4 -0.0821800231933593 2 Unmodified _SLKPRVVDF_ ENSG00000108094|ENST00000374749|CUL2;ENST00000478044.1_1_10:35352986-35363196:-|nuORF;nc|ENSG00000108094|Q13617-2|CUL2 7.910154910731844 0.6385446671287552 6 W 1 9 10.379 0.0 0.0 0.97948 0.0 0.0 855.5142173572864 0.0 855.5142173572864 0.0 0.3786035696905898 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.97948 - 61 + 1 1.52 76303.2 1.0 2889 5522 8411 SUDHL4_400M_050219_2,8413 SUDHL4_400M_050219_2,8413,SLKPRVVDF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8414 45.558 233.0 170420.0 25 0 18916.0 -1 VLTVCISII 9 70 509.30532448812 1016.59609604304 2 509.3054382205009 MULTI CID FTMS 0 0 0 8411 141022.65625 1.0 0 0.0 3 Carbamidomethyl (C) _VLTVC(Carbamidomethyl (C))ISII_ ENSG00000244694|ENST00000339488|PTCHD4;nc|ENSG00000244694|Q6ZW05-2|PTCHD4;nc|ENSG00000244694|Q6ZW05-4|PTCHD4;nc|ENSG00000244694|Q6ZW05|PTCHD4 9.347437153973935 0.588369872918737 6 {I|L} 1 -1 12.218 0.0 0.0 1.2019 0.0 0.0 885.5011386229212 0.0 885.5011386229212 0.0 8.239087409443187 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2019 + + 17 + 1 1.52 36818.6 1.0 2890 5522 8411 SUDHL4_400M_050219_2,8414 SUDHL4_400M_050219_2,8414,VLTVCISII False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8415 45.572 800.0 154450.0 25 0 39668.0 42595 VTRLLRQL 8 127 499.8269047863886 997.6392566395772 2 499.8265563845634 MULTI CID FTMS 0 0 0 8411 93954.0625 0.4735277179475609 -5 0.1563682556152343 4 Unmodified _VTRLLRQL_ ENST00000348520.10_2_14:104175690-104176350:+|nuORF 2.889219685676258 0.8067950007271085 6 Q{M(Oxidation (M))|F} 2 7 17.703 0.0 0.0 1.7745 0.0 0.0 704.4995299323491 0.0 704.4995299323491 0.0 3.546349804879154 0.0 0.0 0 0.0 0.0 0.0 0.5 Q{M(Oxidation (M))|F} 1.7745 - 114 + 1 1.52 98170.2 0.449999988079071 2891 5522 8411 SUDHL4_400M_050219_2,8415 SUDHL4_400M_050219_2,8415,VTRLLRQL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8416 45.574 86.0 911110.0 25 0 227800.0 + 27476 PKGKDKAR 8 84 450.2746633814199 898.5347738296398 2 450.7762939333916 MULTI CID FTMS 0 0 0 8411 756565.4375 0.5677443746623682 -4 0.123321533203125 5 Unmodified _PKGKDKAR_ REV__ENSG00000083857|ENST00000441802|FAT1 0.6903765706972694 0.8201419426409876 6 {I|L} 1 -1 10.089 0.0 0.0 1.1228 0.0 0.0 767.4396027864742 0.0 767.4396027864742 0.0 5.484550065040281 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1228 - 5 + 1 1.52 65927.3 1.0 2892 5522 8411 SUDHL4_400M_050219_2,8416 SUDHL4_400M_050219_2,8416,PKGKDKAR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8419 45.583 142.0 356960.0 25 0 46771.0 + 18376 KVPEWVDTV 9 80 536.7871799713155 1071.5598070094309 2 536.7875244021416 MULTI CID FTMS 0 0 0 8418 448795.65625 0.5206595999029264 -7 0.1968879699707031 1 Unmodified _KVPEWVDTV_ ENSG00000105372|ENST00000598742|RPS19 27.628801355627647 0.1796483985696185 6 [WE]PVKVDTV 9 4 + 41.036 0.0 0.0 3.8295 3.8295 73.603 0.0 0.0 0.0 3.010299956639805 1.9897000433601804 1.9897000433601804 1.9897000433601804 0 0.8182503180159344 0.0 0.0 0.0 [WE]PVKVDTV;[WE]PVDTVKV;[EP]WVKVDTV;[EP]WVDTVKV;{[RE]|[WV]}[TP]RVDTV;{[RE]|[WV]}[EP]KVDTV;[W{M(Oxidation (M))|F}]VR[HQ]TV;{[RE]|[WV]}[EP]DTVKV;[EP]VWKVDTV;{[RE]|[WV]}D[EP]TVKV 3.8295;3.6439;3.5486;3.3629;3.3193;3.2741;3.2583;3.0884;2.9868;2.8075 -;-;-;-;-;-;-;-;-;- 352 1 1.52 49139.0 1.0 2893 5524 8418 SUDHL4_400M_050219_2,8419 SUDHL4_400M_050219_2,8419,KVPEWVDTV False True KVPEWVDTV 45.583011 536.787524402142 10090343.0 8418.0 ENSG00000105372|ENST00000598742|RPS19 3.0601497491200766 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8420 45.587 189.0 324700.0 25 0 18567.0 + -1 HMMPDLPNV 9 106 543.2400395722191 1084.465526211238 2 543.2412597537041 MULTI CID FTMS 0 0 0 8418 279226.25 0.6663013231188268 -3 0.0733680725097656 2 2 Oxidation (M) _HM(Oxidation (M))M(Oxidation (M))PDLPNV_ nc|ENSG00000134014|Q9H9T3-5|ELP3;nc|ENSG00000134014|Q9H9T3-2|ELP3;ENSG00000134014|ENST00000256398|ELP3;nc|ENSG00000134014|Q9H9T3-4|ELP3 32.30548876998284 0.1201446275138228 6 {[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}[DP]{I|L}PNV 9 -1 + 28.975 0.0 0.0 2.6718 2.6718 82.896 0.0 0.0 0.0 3.925449767853312 14.28211852677514 3.925449767853312 28.97485613133917 0 0.8851518780601924 0.0 0.0 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}{M(Oxidation (M))|F}[DP]{I|L}PNV 2.6718 + + 92 1 1.52 51756.1 1.0 2894 5524 8418 SUDHL4_400M_050219_2,8420 SUDHL4_400M_050219_2,8420,HMMPDLPNV False False HMMPDLPNV 45.586655 543.241259753704 2488997.25 8418.0 nc|ENSG00000134014|Q9H9T3-5|ELP3;;nc|ENSG00000134014|Q9H9T3-2|ELP3;;ENSG00000134014|ENST00000256398|ELP3;;nc|ENSG00000134014|Q9H9T3-4|ELP3 8.361629327138266 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8421 45.588 20.0 2293800.0 25 0 429600.0 + 40221 VGRLRLAD 8 82 450.2746633814199 898.5347738296398 2 450.2745239138603 MULTI CID FTMS 0 0 0 8418 2671520.25 0.9005049058859002 -2 0.0405197143554687 3 Unmodified _VGRLRLAD_ REV__ENST00000528878.1_1_7:64465346-64465520:-|nuORF 0.0 0.8243325171867699 6 W 1 -1 5.4846 0.0 0.0 0.61039 0.0 0.0 449.395138675146 260.0285738580688 709.4237125332148 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.61039 - 2 + 1 1.52 41047.1 1.0 2895 5524 8418 SUDHL4_400M_050219_2,8421 SUDHL4_400M_050219_2,8421,VGRLRLAD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8422 45.593 293.0 198010.0 25 0 36163.0 32505 SALGYLHSL 9 87 480.76114173483273 959.5077305364656 2 480.7611266970634 MULTI CID FTMS 0 0 0 8418 108605.3125 0.2918091306298367 -7 0.1968879699707031 4 Unmodified _SALGYLHSL_ ENSG00000118515|ENST00000367858|SGK1;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;ENST00000474427.6_1_6:134493798-134493948:-|nuORF;ENST00000477460.6_1_6:134491408-134493948:-|nuORF;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;nc|ENSG00000118515|O00141-3|SGK1;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000118515|O00141|SGK1 43.85829265575387 0.0542763391141878 6 {[SA]|[TG]}{I|L}GY{I|L}HS{I|L} 9 0 + 60.561 0.0 0.0 6.3117 6.3117 93.122 0.0 0.0 0.0 18.88992935625594 13.099808706263367 13.099808706263367 24.71971276399756 0 0.7742275032520141 1.6989700043360187 0.805462187404089 0.0 + + {[SA]|[TG]}{I|L}GY{I|L}HS{I|L};{[SA]|[TG]}{I|L}[HA][YV]S{I|L};{[SA]|[TG]}G[HK][HA][RP];{[SA]|[TG]}{I|L}{[CA]|SS}[KG]TP{I|L};{[SA]|[TG]}{[WT]|[RM]}[KG]TP{I|L};[HS][KQ][HA][RP];[H{I|L}]{[ET]|[MV]}[HA][RP];{[QS]|[NT]}[HK][HA][RP] 6.3117;3.7354;3.1174;3.025;1.5832;1.5064;1.0092;0.46423 +;-;-;-;-;-;-;- + 234 + 1 1.52 48184.9 1.0 2896 5524 8418 SUDHL4_400M_050219_2,8422 SUDHL4_400M_050219_2,8422,SALGYLHSL True True SAIGYLHSL 45.593198 480.761126697063 1544217.75 8418.0 nc|ENSG00000101049|Q9HBY8-3|SGK2;;nc|ENSG00000101049|Q9HBY8-1|SGK2;;ENSG00000101049|ENST00000373100|SGK2 0.6320951680342356 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8424 45.602 240.0 252790.0 25 0 37774.0 44061 YIRKKQMAI 9 79 575.8432141312703 1149.6718753293403 2 575.8439819216728 MULTI CID FTMS 0 0 0 8423 220549.0625 0.3402969394650175 15 -0.4210929870605469 1 Unmodified _YIRKKQMAI_ ENST00000515273.5_2_10:123848201-123892185:+|nuORF 2.302733041254933 0.8342969208511092 6 R 1 8 4.6041 0.0 0.0 0.40047 0.0 0.0 575.3539157793512 415.1962374322876 990.5501532116386 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + R 0.40047 + + 10 + 1 1.52 50198.5 1.0 2897 5525 8423 SUDHL4_400M_050219_2,8424 SUDHL4_400M_050219_2,8424,YIRKKQMAI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8425 45.605 202.0 89437.0 25 0 7975.4 + 38703 TTRRHHRR 8 50 560.3217780573636 1118.6290031815272 2 560.3221923708916 MULTI CID FTMS 0 0 0 8423 175861.171875 0.3058196213603217 16 -0.4561996459960937 2 Unmodified _TTRRHHRR_ REV__ENST00000181839.8_1_7:39989713-39989800:+|nuORF 0.6903765706972694 0.8201419426409876 6 N 1 -1 3.9794 0.0 0.0 0.35574 0.0 0.0 916.5327335055492 85.03018366031483 1001.562917165864 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.35574 - 3 + 1 1.52 21786.0 1.0 2898 5525 8423 SUDHL4_400M_050219_2,8425 SUDHL4_400M_050219_2,8425,TTRRHHRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8426 45.619 800.0 126590.0 25 0 20334.0 + 26010 NLVTSRRFKG 10 124 589.3430741013665 1176.6715952695329 2 589.3433715701103 MULTI CID FTMS 0 0 0 8423 124844.640625 0.0814362624630227 -16 0.4951324462890625 3 Unmodified _NLVTSRRFKG_ REV__ENST00000380882.5_4:85656-87337:+|nuORF 6.2057823575117 0.6979311171683138 6 H 1 -1 3.0989 0.0 0.0 0.26337 0.0 0.0 951.5600973220704 85.0301989191039 1036.5902962411742 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.26337 - 125 + 1 1.52 78557.6 0.5600000023841858 2899 5525 8423 SUDHL4_400M_050219_2,8426 SUDHL4_400M_050219_2,8426,NLVTSRRFKG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8428 45.629 382.0 202830.0 25 0 18265.0 + 13493 HLYEDLFRA 9 100 582.2954759915958 1162.5763990499916 2 582.2960693240166 MULTI CID FTMS 0 0 0 8427 110455.546875 0.87431797056313 -5 0.1150283813476562 1 Unmodified _HLYEDLFRA_ ENSG00000160949|ENST00000409379|TONSL;ENST00000497613.2_1_8:145667587-145667875:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL 21.53697664764585 0.2571576504437394 6 H{I|L}YED 5 4 63.488 0.0 0.0 5.4609 0.0 0.0 0.0 502.2786982407096 502.2786982407096 43.3103844862778 0.0 0.0 0.0 0 1.1549471895720984 1.6989700043360187 0.0 0.0 + H{I|L}YED 5.4609 + + 187 + 1 1.52 63245.3 1.0 2900 5526 8427 SUDHL4_400M_050219_2,8428 SUDHL4_400M_050219_2,8428,HLYEDLFRA False True HLYEDLFRA 45.628667 582.296069324017 1576010.625 8427.0 ENSG00000160949|ENST00000409379|TONSL;;ENST00000497613.2_1_8:145667587-145667875:-|nuORF;;nc|ENSG00000160949|Q96HA7-2|TONSL 6.299736658732097 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8429 45.635 359.0 171470.0 25 0 8004.0 -1 AMYPDQVQL 9 109 540.7548638477517 1079.4951747623031 2 540.7548705935478 MULTI CID FTMS 0 0 0 8427 135858.84375 0.1351954733610855 -9 0.2385482788085937 2 Oxidation (M) _AM(Oxidation (M))YPDQVQL_ ENSG00000135108|ENST00000622495|FBXO21;nc|ENSG00000135108|O94952|FBXO21 25.399314129420983 0.2080152500878129 6 [AG]DPV{[MS]|[{M(Oxidation (M))|F}A]}YQ{I|L} 10 -1 + 22.335 0.0 0.0 2.069 2.069 72.76 0.0 0.0 0.0 3.6991128507179374 3.0276467146073536 3.0276467146073536 3.6991128507179374 0 0.5044321917401079 1.6989700043360187 0.0 0.0 [AG]DPV{[MS]|[{M(Oxidation (M))|F}A]}YQ{I|L};{[MS]|[{M(Oxidation (M))|F}A]}Y[DP]QVQ{I|L};[AG]DPY{[MS]|[{M(Oxidation (M))|F}A]}VQ{I|L};[AG]DPY[PG]YQ{I|L};[AG]DP{[MS]|[{M(Oxidation (M))|F}A]}YVQ{I|L};[AG]V[DP]{[MS]|[{M(Oxidation (M))|F}A]}YQ{I|L};[AG]DP{[MS]|[{M(Oxidation (M))|F}A]}VYQ{I|L};[DP]QV{[MS]|[{M(Oxidation (M))|F}A]}YQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PV{[MS]|[{M(Oxidation (M))|F}A]}YQ{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VQ[DP]{[CP]|[EA]}Y 2.069;1.7263;1.7004;1.4215;1.4215;1.216;1.1426;1.0285;1.0055;0.98428 -;+;-;-;-;-;-;-;-;- + 676 1 1.52 51559.0 1.0 2901 5526 8427 SUDHL4_400M_050219_2,8429 SUDHL4_400M_050219_2,8429,AMYPDQVQL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8430 45.649 800.0 114050.0 25 0 8668.0 + 33393 SGRLLLAGY 9 128 475.2771284035168 948.5397038738336 2 475.2765685915947 MULTI CID FTMS 0 0 0 8427 98189.984375 1.0 0 0.0 3 Unmodified _SGRLLLAGY_ ENSG00000078369|ENST00000378609|GNB1;ENSG00000114450|ENST00000232564|GNB4;ENSG00000172354|ENST00000303210|GNB2;ENST00000461893.5_1_1:1720336-1724757:-|nuORF;nc|ENSG00000078369|P62873-2|GNB1;nc|ENSG00000172354|P62879-2|GNB2 23.78978130925829 0.2284941198415988 6 {I|L}{I|L}{I|L}AGY 6 3 55.706 0.0 0.0 5.8728 0.0 0.0 300.155077049025 0.0 300.155077049025 0.0 39.50827206916173 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 + {I|L}{I|L}{I|L}AGY 5.8728 + + 127 1 1.52 72417.0 0.8899999856948853 2902 5526 8427 SUDHL4_400M_050219_2,8430 SUDHL4_400M_050219_2,8430,SGRLLLAGY False True SGRLLLAGY 45.648959 475.276568591595 505267.03125 8427.0 ENST00000461893.5_1_1:1720336-1724757:-|nuORF;;ENSG00000078369|ENST00000378609|GNB1;;nc|ENSG00000078369|P62873-2|GNB1;;nc|ENSG00000172354|P62879-2|GNB2;;ENSG00000172354|ENST00000303210|GNB2;;ENSG00000114450|ENST00000232564|GNB4 5.469499111175537 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8431 45.663 800.0 89516.0 25 0 14746.0 + 31040 RLHPRSSATAP 11 110 596.8328762637766 1191.651199594353 2 596.8326904177666 MULTI CID FTMS 0 0 0 8427 86701.6015625 1.0 0 0.0 4 Unmodified _RLHPRSSATAP_ REV__ENST00000325643.5_1_9:90499938-90500478:+|nuORF 4.5288652416199255 0.8537804541365391 6 R{I|L}W 3 -1 24.693 0.0 0.0 2.0721 0.0 0.0 0.0 733.3623751275999 733.3623751275999 12.412191149087889 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R{I|L}W 2.0721 - 43 + 1 1.52 57147.2 0.4699999988079071 2903 5526 8427 SUDHL4_400M_050219_2,8431 SUDHL4_400M_050219_2,8431,RLHPRSSATAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8434 45.676 388.0 213150.0 25 0 33689.0 + 33568 SILSNIHEV 9 115 506.277272763257 1010.539992593314 2 506.2773010134697 MULTI CID FTMS 0 0 0 8433 142487.328125 0.6666866739194786 -2 0.0474395751953125 1 Unmodified _SILSNIHEV_ ENSG00000165029|ENST00000374736|ABCA1 20.41453444215458 0.284085796332423 6 {[TV]|[{I|L}S]}{I|L}SN{I|L}[HD]{I|L} 9 2 + 44.954 0.0 0.0 4.4485 4.4485 83.016 0.0 0.0 0.0 28.578352795270657 1.163385648463816 1.163385648463816 9.208187539523747 0 0.7134679910804405 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}SN{I|L}[HD]{I|L};{[TV]|[{I|L}S]}{I|L}SGG{I|L}[HD]{I|L};{[TV]|[{I|L}S]}{I|L}QQ{I|L}[Y{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}{I|L}S[QA]P[QP]A;{[TV]|[{I|L}S]}{I|L}S[H{I|L}][DN]{I|L};{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V][TA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[TV]|[{I|L}S]}{I|L}[{M(Oxidation (M))|F}V]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SA;{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V]{I|L}[TA]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[TV]|[{I|L}S]}[{M(Oxidation (M))|F}V]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}SA;{[TV]|[{I|L}S]}{I|L}S[H{I|L}][PS]SA 4.4485;3.5373;3.1286;3.0702;2.9868;2.6841;2.6686;2.3984;2.3829;2.247 -;-;-;-;-;-;-;-;-;- 643 + 1 1.52 67346.8 1.0 2904 5528 8433 SUDHL4_400M_050219_2,8434 SUDHL4_400M_050219_2,8434,SILSNIHEV False True SILSNIHEV 45.676196 506.27730101347 877246.375 8433.0 ENSG00000165029|ENST00000374736|ABCA1 3.87190580368042 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8435 45.69 800.0 94581.0 25 0 12929.0 16734 KFFRWVRR 8 109 597.8561903970555 1193.6978278609108 2 597.8562499880791 MULTI CID FTMS 0 0 0 8433 124689.1875 0.1942987953637721 -13 0.3400993347167969 2 Unmodified _KFFRWVRR_ ENSG00000185955|ENST00000332375|SPACDR 0.6903765706972694 0.8201419426409876 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 9 1 1.52 59932.1 0.550000011920929 2905 5528 8433 SUDHL4_400M_050219_2,8435 SUDHL4_400M_050219_2,8435,KFFRWVRR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8437 45.708 800.0 141350.0 25 0 26669.0 + 14639 IIKHQSLALIC 11 96 619.8688254335004 1237.7230979338008 2 619.8693725466728 MULTI CID FTMS 0 0 0 8436 165931.96875 0.7670563592139216 3 -0.0471267700195312 1 Unmodified _IIKHQSLALIC_ REV__ENST00000429248.1_1_7:56706781-56707144:-|nuORF 3.2813086475875832 0.8596665074481906 6 H 1 -1 9.464 0.0 0.0 0.76463 0.0 0.0 1082.6571016953226 0.0 1082.6571016953226 0.0 4.859856381998782 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.76463 + + 10 + 1 1.52 88268.5 0.5400000214576721 2906 5529 8436 SUDHL4_400M_050219_2,8437 SUDHL4_400M_050219_2,8437,IIKHQSLALIC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8440 45.721 360.0 162580.0 25 0 17210.0 30391 RAQPQAKA 8 97 435.25112895059885 868.4877049679977 2 435.2511169314384 MULTI CID FTMS 0 0 0 8439 215305.4375 0.8495077286469875 -4 0.048980712890625 1 Unmodified _RAQPQAKA_ ENSG00000074621|ENST00000261892|SLC24A1;ENST00000434116.6_1_15:65916409-65944223:+|nuORF;nc|ENSG00000074621|O60721-2|SLC24A1;nc|ENSG00000074621|O60721-3|SLC24A1 2.577480529830294 0.808687252328423 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 3 1 1.52 51386.7 1.0 2907 5531 8439 SUDHL4_400M_050219_2,8440 SUDHL4_400M_050219_2,8440,RAQPQAKA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8441 45.728 409.0 160320.0 25 0 13561.0 + 14576 IIAHFKYSGK 10 89 582.3344689235521 1162.654384913904 2 582.3350097537041 MULTI CID FTMS 0 0 0 8439 151238.84375 0.316496732224471 -8 0.1382484436035156 2 Unmodified _IIAHFKYSGK_ REV__ENSG00000171316|ENST00000423902|CHD7;REV__nc|ENSG00000171316|Q9P2D1-2|CHD7 7.910154910731844 0.6900473968920092 6 [H{I|L}][{I|L}A]ADEY{I|L} 9 -1 44.103 0.0 0.0 3.7933 0.0 0.0 0.0 134.11393066619885 134.11393066619885 37.11303739409743 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [H{I|L}][{I|L}A]ADEY{I|L} 3.7933 - 131 1 1.52 54291.1 1.0 2908 5531 8439 SUDHL4_400M_050219_2,8441 SUDHL4_400M_050219_2,8441,IIAHFKYSGK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8442 45.733 285.0 209850.0 25 0 16329.0 + 11667 GLDPTQFRV 9 96 516.7770612021748 1031.5395694711494 2 516.7770873904228 MULTI CID FTMS 0 0 0 8439 103995.890625 0.4952153211508229 -6 0.1185951232910156 3 Unmodified _GLDPTQFRV_ ENSG00000101868|ENST00000379068|POLA1;ENST00000494204.1_1_X:24833141-24859977:+|nuORF;nc|ENSG00000101868|P09884|POLA1 32.78568957990786 0.1150597335874693 6 {[VA]|[{I|L}G]}DPTQ{M(Oxidation (M))|F}RV 9 0 + 63.816 0.0 0.0 6.1865 6.1865 88.822 0.0 0.0 0.0 52.03369007819427 5.100419382941404 5.100419382941404 9.208187539523747 0 0.8494850021680094 2.0 0.3494850021680094 0.0 + + {[VA]|[{I|L}G]}DPTQ{M(Oxidation (M))|F}RV;{[VA]|[{I|L}G]}DPT[AG]{M(Oxidation (M))|F}RV;{[VA]|[{I|L}G]}DCK{I|L}ERV;{[VA]|[{I|L}G]}D[{I|L}T]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RV;{[VA]|[{I|L}G]}[MT]N{[QN]|[E{I|L}]|[KN]}RV;{[VA]|[{I|L}G]}[MT]P{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}RV 6.1865;5.2939;4.3632;2.831;1.9451;1.4968 +;-;-;-;-;- + 191 + 1 1.52 54215.6 1.0 2909 5531 8439 SUDHL4_400M_050219_2,8442 SUDHL4_400M_050219_2,8442,GLDPTQFRV True True GLDPTQFRV 45.733358 516.777087390423 1101762.125 8439.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1;;ENST00000494204.1_1_X:24833141-24859977:+|nuORF 7.687107563018799 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8443 45.737 199.0 221330.0 25 0 20793.0 + 11864 GLSQITNQL 9 89 487.2691702423395 0 487.2694885134697 PEAK CID FTMS 0 0 0 8439 157378.90625 0.9656531491044776 -1 0.004058837890625 4 Unmodified _GLSQITNQL_ ENSG00000115464|ENST00000398571|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34 34.10243960390752 0.0907105591560806 6 TGADG 5 9 23.843 0.0 0.0 2.4517 0.0 0.0 486.2815217817509 82.06684290103749 568.3483646827883 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.5501648626366046 0.0 TGADG 2.4517 - 191 + 1 1.52 38612.5 1.0 2910 5531 8439 SUDHL4_400M_050219_2,8443 SUDHL4_400M_050219_2,8443,GLSQITNQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8445 45.742 69.0 309450.0 25 0 49972.0 14542 IHAHKVVL 8 44 458.7881170313744 915.5616811295488 2 458.7879821658134 MULTI CID FTMS 0 0 0 8444 803892.125 0.5914620306203606 4 -0.0738601684570312 1 Unmodified _IHAHKVVL_ ENSG00000179454|ENST00000396128|KLHL28;nc|ENSG00000179454|Q9NXS3-2|KLHL28 0.7936320650641473 0.8195151834710337 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.52 24138.1 1.0 2911 5532 8444 SUDHL4_400M_050219_2,8445 SUDHL4_400M_050219_2,8445,IHAHKVVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8446 45.756 800.0 101630.0 25 0 11947.0 + 1401 ALATLIHQV 9 119 483.2925406567899 964.57052838038 2 483.2927123904228 MULTI CID FTMS 0 0 0 8444 93259.8125 0.2174570015645201 8 -0.2771339416503906 2 Unmodified _ALATLIHQV_ ENSG00000111652|ENST00000543155|COPS7A 36.12702656103203 0.0967173616627612 6 [{I|L}A]AT{I|L}{I|L}HQV 9 0 + 68.166 0.0 0.0 7.067 7.067 82.137 0.0 0.0 0.0 27.147642715192504 1.165055690714368 1.165055690714368 1.165055690714368 0 0.8494850021680094 2.0 0.0 0.4947026752325154 + + [{I|L}A]AT{I|L}{I|L}HQV;[{I|L}A]AT{I|L}{I|L}HN{I|L};[{I|L}A]AT{I|L}{I|L}HAGV;[{I|L}A]AT{I|L}{I|L}HGG{I|L} 7.067;6.9462;6.0765;5.4787 +;-;-;- + 393 + 1 1.52 66560.7 0.6200000047683716 2912 5532 8444 SUDHL4_400M_050219_2,8446 SUDHL4_400M_050219_2,8446,ALATLIHQV True True ALATLIHQV 45.75576 483.292712390423 3462836.75 8444.0 ENSG00000111652|ENST00000543155|COPS7A 6.405547142028809 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8447 45.77 800.0 116910.0 25 0 7141.2 + 11944 GMQIPSTQF 9 140 512.741932139365 1023.46931134553 2 512.7418701052666 MULTI CID FTMS 0 0 0 8444 143336.203125 0.3015222250737707 13 -0.4560317993164062 3 Oxidation (M) _GM(Oxidation (M))QIPSTQF_ ENSG00000168036|ENST00000349496|CTNNB1 46.020951573049366 0.0490941689151868 6 [AG]TC{I|L} 5 7 29.384 0.0 0.0 2.871 0.0 0.0 0.0 575.2465149740757 575.2465149740757 10.126656038284452 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.25 0.0 [AG]TC{I|L} 2.871 - 451 1 1.52 73326.9 0.5699999928474426 2913 5532 8444 SUDHL4_400M_050219_2,8447 SUDHL4_400M_050219_2,8447,GMQIPSTQF True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8449 45.787 800.0 142470.0 25 0 25218.0 + 18750 LALRVGPPI 9 136 468.3058769896692 934.5972010461384 2 468.3065063357353 MULTI CID FTMS 0 0 0 8448 39886.98828125 0.3811114869159574 -5 0.1028861999511718 1 Unmodified _LALRVGPPI_ REV__ENST00000335509.10_1_12:113735488-113735659:+|nuORF 28.486842064014134 0.1687311288560894 6 {I|L}A{I|L} 3 -1 51.808 0.0 0.0 5.5434 0.0 0.0 0.0 634.3680460395877 634.3680460395877 25.64614344974784 0.0 0.0 0.0 0 0.5610312860818771 2.0 0.0 0.0 {I|L}A{I|L} 5.5434 + + 109 + 1 1.52 90370.7 0.4000000059604645 2914 5533 8448 SUDHL4_400M_050219_2,8449 SUDHL4_400M_050219_2,8449,LALRVGPPI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8452 45.798 223.0 323880.0 25 0 61465.0 41085 VNIGVKVLYE 10 88 567.3297394266125 1132.644925920025 2 567.3300659060478 MULTI CID FTMS 0 0 0 8451 318827.375 0.2021378297742066 24 -1.1585807800292969 1 Unmodified _VNIGVKVLYE_ ENSG00000167210|ENST00000642948|LOXHD1;nc|ENSG00000167210|Q8IVV2-3|LOXHD1;nc|ENSG00000167210|Q8IVV2|LOXHD1 1.4819007175156935 0.719781833666733 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.52 58953.9 1.0 2915 5535 8451 SUDHL4_400M_050219_2,8452 SUDHL4_400M_050219_2,8452,VNIGVKVLYE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8453 45.807 479.0 129780.0 25 0 17307.0 + 17104 KLFHGEIWPA 10 87 399.8854198094685 1196.6344300286055 3 399.8854247927666 MULTI CID FTMS 0 0 0 8451 106673.1328125 0.1967432276113919 -4 0.0795822143554687 2 Unmodified _KLFHGEIWPA_ ENST00000447578.6_1_12:110930933-110930975:-|nuORF 15.738622578938676 0.5834632108994704 6 [DV]{[SA]|[TG]}{I|L}K{M(Oxidation (M))|F} 7 8 37.976 0.0 0.0 3.1735 0.0 0.0 0.0 433.18503748111567 433.18503748111567 27.518119729938 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.8494850021680094 [DV]{[SA]|[TG]}{I|L}K{M(Oxidation (M))|F} 3.1735 - 89 + 1 1.52 51567.1 1.0 2916 5535 8451 SUDHL4_400M_050219_2,8453 SUDHL4_400M_050219_2,8453,KLFHGEIWPA False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8454 45.811 237.0 206920.0 25 0 51163.0 + 18851 LASPHSPIL 9 74 467.7722194691688 933.5298860051377 2 467.7729369997978 MULTI CID FTMS 0 0 0 8451 100542.71875 0.7757078053716279 -2 0.0217819213867187 3 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 32.116972079565 0.1225432171549407 6 TP{I|L} 3 7 20.802 0.0 0.0 2.2283 0.0 0.0 604.3347088584563 0.0 604.3347088584563 0.0 9.832881222565248 0.0 0.0 0 0.0 0.0 0.0 0.0 TP{I|L} 2.2283 - 110 + 1 1.52 42606.9 1.0 2917 5535 8451 SUDHL4_400M_050219_2,8454 SUDHL4_400M_050219_2,8454,LASPHSPIL True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8456 45.823 524.0 204820.0 25 0 26797.0 + -1 STPQAFVMPSM 11 94 614.2748149136158 1226.5350768940316 2 614.2748901247978 MULTI CID FTMS 0 0 0 8455 95541.9921875 0.3503435891753367 -3 0.0414237976074218 1 2 Oxidation (M) _STPQAFVM(Oxidation (M))PSM(Oxidation (M))_ REV__ENSG00000151065|ENST00000280665|DCP1B;REV__ENST00000543381.5_1_12:2055374-2100299:-|nuORF;REV__nc|ENSG00000151065|Q8IZD4-2|DCP1B 26.268140514670165 0.4754186812857754 6 {I|L}PS{M(Oxidation (M))|F} 4 -1 47.805 0.0 0.0 3.8976 0.0 0.0 764.3206126379754 0.0 764.3206126379754 0.0 25.33214413515629 0.0 0.0 0 0.8807196863200843 0.0 0.7059771852360797 0.0 {I|L}PS{M(Oxidation (M))|F} 3.8976 - 137 + 1 1.52 81130.7 1.0 2918 5536 8455 SUDHL4_400M_050219_2,8456 SUDHL4_400M_050219_2,8456,STPQAFVMPSM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8457 45.833 563.0 175580.0 25 0 14590.0 + -1 LGCHPPWE 8 135 498.2247266979823 994.4349004627646 2 498.2250549197197 MULTI CID FTMS 0 0 0 8455 148372.078125 0.5149715637471536 -2 0.0237083435058593 2 Carbamidomethyl (C) _LGC(Carbamidomethyl (C))HPPWE_ REV__ENST00000585538.1_1_17:41020205-41020445:+|nuORF 15.768221252438446 0.6779680726941459 6 {I|L} 1 -1 14.846 0.0 0.0 1.4929 0.0 0.0 863.3400803717475 0.0 863.3400803717475 0.0 3.0636321847129544 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {I|L} 1.4929 + + 602 + 1 1.52 79603.2 1.0 2919 5536 8455 SUDHL4_400M_050219_2,8457 SUDHL4_400M_050219_2,8457,LGCHPPWE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8458 45.842 549.0 132920.0 25 0 17957.0 + -1 ALMGSPQLV 9 104 466.24883392859135 930.4831149239828 2 466.2494689822197 MULTI CID FTMS 0 0 0 8455 108727.96875 1.0 0 0.0 3 Oxidation (M) _ALM(Oxidation (M))GSPQLV_ ENSG00000173801|ENST00000393931|JUP 30.22481116460888 0.1466181017706357 6 [QP]SY[QP]{I|L}V 8 -1 + 32.592 0.0 0.0 3.5026 3.5026 82.51 0.0 0.0 0.0 9.387081865097748 18.61216386672549 9.387081865097748 13.283503268237023 0 0.6435078169319297 0.721246399047171 0.7059771852360797 0.0 [QP]SY[QP]{I|L}V;[{I|L}A]{M(Oxidation (M))|F}[SG][QP]{I|L}V;[QP][MT]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}V;[QP]S[PG]{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}V;{[CP]|[EA]}{I|L}{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))G]|[NC]}{I|L}V;{[CP]|[EA]}{I|L}{[VA]|[{I|L}G]}{[C(Carbamidomethyl (C))G]|[NC]}V{I|L} 3.5026;2.0751;1.5466;1.3214;1.1126;0.83821 -;+;-;-;-;- + 115 1 1.52 60109.8 1.0 2920 5536 8455 SUDHL4_400M_050219_2,8458 SUDHL4_400M_050219_2,8458,ALMGSPQLV False False ALMGSPQLV 45.842297 466.24946898222 622749.875 8455.0 ENSG00000173801|ENST00000393931|JUP 5.489048798878987 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8459 45.847 262.0 192670.0 25 0 17704.0 + 40805 VLLQVVPSSA 10 95 506.8052463612598 0 506.8057739138603 PEAK CID FTMS 0 0 0 8455 94720.1171875 0.6021504367017612 -2 0.0237083435058593 4 Unmodified _VLLQVVPSSA_ ENSG00000104689|ENST00000221132|TNFRSF10A 43.85829265575387 0.0827756760151878 6 VVR 3 8 17.307 0.0 0.0 1.7109 0.0 0.0 360.1639462363883 294.1819857233032 654.3459319596915 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 VVR 1.7109 - 463 + 1 1.52 45535.2 1.0 2921 5536 8455 SUDHL4_400M_050219_2,8459 SUDHL4_400M_050219_2,8459,VLLQVVPSSA True True VLLQVVPSSA 45.847143 506.80577391386 748819.75 8455.0 ENSG00000104689|ENST00000221132|TNFRSF10A 5.454285303751628 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8461 45.853 66.0 478240.0 25 0 101270.0 + 40222 VGRLRLAD 8 53 450.2746633814199 898.5347738296398 2 450.2746459841728 MULTI CID FTMS 0 0 0 8460 783814.1875 0.2642048178922547 11 -0.4177360534667969 1 Unmodified _VGRLRLAD_ REV__ENST00000528878.1_1_7:64465346-64465520:-|nuORF 0.0 0.8243325171867699 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 32439.2 1.0 2922 5537 8460 SUDHL4_400M_050219_2,8461 SUDHL4_400M_050219_2,8461,VGRLRLAD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8462 45.855 137.0 270410.0 25 0 28842.0 + 18377 KVPEWVDTV 9 73 536.7871799713155 1071.5598070094309 2 536.7879516482353 MULTI CID FTMS 0 0 0 8460 248549.828125 0.2883491679683645 6 -0.2539787292480469 2 Unmodified _KVPEWVDTV_ ENSG00000105372|ENST00000598742|RPS19 17.11289562659939 0.3734572693229295 6 [EP]WVKVDTV 9 4 + 36.304 0.0 0.0 3.3879 3.3879 78.053 0.0 0.0 0.0 3.652792693512417 22.32447808893327 3.652792693512417 8.20702780392488 0 0.7429928190999391 0.0 0.0 0.0 [EP]WVKVDTV;[W{M(Oxidation (M))|F}]VR[HQ]TV;{[MG]|[TS]}[HS]VKVDTV;[W{M(Oxidation (M))|F}]VR[HQ]S{I|L};[EP]WVD{[TV]|[{I|L}S]}KV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP]RVDTV;{[MG]|[TS]}[HS]VD{[TV]|[{I|L}S]}KV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[EP][VG]VDTV;{[TV]|[{I|L}S]}[WP][VG]VDTV 3.3879;2.6221;2.6191;1.7547;1.7333;1.4476;0.96446;0.58829;0.58829 -;-;-;-;-;-;-;-;- 140 1 1.52 35786.8 1.0 2923 5537 8460 SUDHL4_400M_050219_2,8462 SUDHL4_400M_050219_2,8462,KVPEWVDTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8463 45.861 296.0 204090.0 25 0 31103.0 + 34067 SLLENIAKA 9 84 479.7813319732351 957.5481110132704 2 479.7823974490166 MULTI CID FTMS 0 0 0 8460 160447.859375 0.8037792248383367 -1 0.0361289978027343 3 Unmodified _SLLENIAKA_ ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;nc|ENSG00000184634|Q93074-3|MED12 21.53697664764585 0.2571576504437394 6 {[TV]|[{I|L}S]}{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}A[KA] 9 0 + 49.6 0.0 0.0 5.1798 5.1798 90.352 0.0 0.0 0.0 16.681212380090216 7.917112166456448 7.917112166456448 49.599549814380666 0 0.6989700043360187 2.0 0.0 0.4247425010840047 + + {[TV]|[{I|L}S]}{I|L}E{[QV]|[N{I|L}]|[RA]|[KV]}A[KA] 5.1798 + + 264 + 1 1.52 50555.2 1.0 2924 5537 8460 SUDHL4_400M_050219_2,8463 SUDHL4_400M_050219_2,8463,SLLENIAKA False True SLLENIAKA 45.860795 479.782397449017 946999.25 8460.0 ENSG00000184634|ENST00000374080|MED12;;nc|ENSG00000184634|Q93074-2|MED12;;nc|ENSG00000184634|Q93074-3|MED12 5.188610394795735 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8464 45.872 652.0 188290.0 25 0 12146.0 + 38915 SLLPTSPRL 9 141 492.298055184123 0 492.2979919314384 PEAK CID FTMS 0 0 0 8460 93158.8984375 1.0 0 0.0 4 Unmodified _TVLKSLHSV_ nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8 24.020572477871973 0.1646235280836931 6 {I|L}PTS 4 7 22.907 0.0 0.0 2.3313 0.0 0.0 200.1174653852242 381.2264498346313 581.3439152198555 0.0 0.0 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}PTS 2.3313 - 367 + 1 1.52 93892.0 1.0 2925 5537 8460 SUDHL4_400M_050219_2,8464 SUDHL4_400M_050219_2,8464,TVLKSLHSV False False SLLPTSPRL 45.872149 492.297991931438 619648.4375 8460.0 nc|ENSG00000112983|Q9H0E9-3|BRD8;;nc|ENSG00000112983|Q9H0E9-2|BRD8;;nc|ENSG00000112983|Q9H0E9-4|BRD8 2.840220292409261 2.0 False 9.0 True nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 8465 45.886 800.0 101780.0 25 0 5399.4 -1 0 112 953.1275774886992 2856.360903066298 3 953.4623901247978 MULTI CID FTMS 0 0 0 8460 92878.140625 0.6031883474121568 -1 0.0361289978027343 5 6 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VAEV 7 -1 44.685 0.0 0.0 1.5644 0.0 0.0 0.0 2080.928077709129 2080.928077709129 27.57084478097105 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}VAEV 1.5644 - 6548 1 1.52 60840.5 0.4300000071525574 2926 5537 8460 SUDHL4_400M_050219_2,8465 SUDHL4_400M_050219_2,8465, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8467 45.891 47.0 917960.0 25 0 187790.0 + -1 WQLTMKKKV 9 65 589.3430741013665 1176.6715952695329 2 589.3431274294853 MULTI CID FTMS 0 0 0 8466 1354006.5 0.883219561197233 -3 0.0946235656738281 1 Oxidation (M) _WQLTM(Oxidation (M))KKKV_ REV__ENST00000466094.5_1_7:107220736-107227893:+|nuORF;REV__ENST00000486326.5_1_7:107220736-107234551:+|nuORF 0.6014990680409731 0.8936861360942873 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 36540.9 1.0 2927 5538 8466 SUDHL4_400M_050219_2,8467 SUDHL4_400M_050219_2,8467,WQLTMKKKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8468 45.892 59.0 717470.0 25 0 41512.0 + -1 AMYPDQVQL 9 80 540.7548638477517 1079.4951747623031 2 540.7553588747978 MULTI CID FTMS 0 0 0 8466 973866.6875 0.9691114996490968 3 -0.1633987426757812 2 Oxidation (M) _AM(Oxidation (M))YPDQVQL_ nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21 32.30548876998284 0.1201446275138228 6 {[QD]|[EN]|[WG]|[KD]|[RS]}PV{[MS]|[{M(Oxidation (M))|F}A]}YQ{I|L} 9 -1 + 28.222 0.0 0.0 2.6144 2.6144 51.09 0.0 0.0 0.0 3.137728966894713 5.7868162092314925 3.137728966894713 0.0 0 0.6237125054200234 0.0 0.7302046884880937 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}PV{[MS]|[{M(Oxidation (M))|F}A]}YQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PY{[MS]|[{M(Oxidation (M))|F}A]}VQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PY[PG]YQ{I|L};{[MS]|[{M(Oxidation (M))|F}A]}Y[DP]QVQ{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PYV{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PVY{[MS]|[{M(Oxidation (M))|F}A]}Q{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}PY[WM]Q{I|L};{[MS]|[{M(Oxidation (M))|F}A]}Y[Y{I|L}]YQ{I|L};{[MS]|[{M(Oxidation (M))|F}A]}Y[DP][AG]VQ{I|L};{[MS]|[{M(Oxidation (M))|F}A]}V{[DA]|[EG]}{[MS]|[{M(Oxidation (M))|F}A]}VQ{I|L} 2.6144;2.6144;2.6144;2.3237;2.1724;2.1724;2.0142;2.0024;1.4707;1.4707 -;-;-;+;-;-;-;-;-;- + 227 1 1.52 41432.3 1.0 2928 5538 8466 SUDHL4_400M_050219_2,8468 SUDHL4_400M_050219_2,8468,AMYPDQVQL False False AMYPDQVQL 45.892265 540.755358874798 12397527.0 8466.0 nc|ENSG00000135108|O94952|FBXO21;;ENSG00000135108|ENST00000622495|FBXO21 7.552653948465983 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8469 45.9 405.0 251540.0 25 0 29130.0 + 33922 SLGLGESLYI 10 121 526.2866696401967 1050.5587863471933 2 526.2870971560478 MULTI CID FTMS 0 0 0 8466 230526.609375 0.5981793719565887 -2 0.074981689453125 3 Unmodified _SLGLGESLYI_ ENSG00000062524|ENST00000263800|LTK;ENST00000563518.5_1_15:41799676-41805922:-|nuORF;nc|ENSG00000062524|P29376-2|LTK;nc|ENSG00000062524|P29376-3|LTK;nc|ENSG00000062524|P29376-4|LTK;nc|ENSG00000062524|P29376-5|LTK 47.74868867922204 0.0933642699623533 6 {[TV]|[{I|L}S]}NE{I|L}S{I|L}Y{I|L} 9 4 + 91.252 0.0 0.0 8.6861 8.6861 83.444 0.0 0.0 0.0 20.737862141609185 68.7472939463698 20.737862141609185 0.2422750325201406 0 0.9247425010840048 2.0 1.3807196863200843 0.2614393726401688 {[TV]|[{I|L}S]}NE{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}DAG{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}DQ{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}GGE{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}GEG{I|L}S{I|L}Y{I|L};{[TV]|[{I|L}S]}G{I|L}ADS{I|L}Y{I|L};{[TV]|[{I|L}S]}DAKE{I|L}Y{I|L};{[TV]|[{I|L}S]}G{I|L}ASD{I|L}Y{I|L};{[TV]|[{I|L}S]}[Q{I|L}]DS{I|L}Y{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}GE{I|L}S{I|L}Y{I|L} 8.6861;8.663;8.4954;8.318;8.1273;7.1499;6.4077;6.3904;6.225;6.2101 -;-;-;-;-;-;-;-;-;- 1529 1 1.52 80152.5 1.0 2929 5538 8466 SUDHL4_400M_050219_2,8469 SUDHL4_400M_050219_2,8469,SLGLGESLYI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8470 45.902 149.0 790760.0 25 0 97561.0 + 27517 PKMIYTKKKE 10 62 633.3690769768929 1264.7236010205856 2 633.3688842654228 MULTI CID FTMS 0 0 0 8466 177514.890625 0.3138102550776095 -13 0.2928009033203125 4 Unmodified _PKMIYTKKKE_ REV__ENST00000272793.9_1_2:170938445-170938493:+|nuORF 3.2813086475875832 0.7114585191678878 6 D 1 -1 11.237 0.0 0.0 0.8885 0.0 0.0 686.3611627117629 460.3068768158344 1146.668039527597 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D 0.8885 - 7 + 1 1.52 89051.9 1.0 2930 5538 8466 SUDHL4_400M_050219_2,8470 SUDHL4_400M_050219_2,8470,PKMIYTKKKE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8471 45.909 344.0 178710.0 25 0 46175.0 + -1 SLMDPPGTAL 10 96 509.107496755801 3556.7015420244074 7 509.2504150271416 MULTI CID FTMS 0 0 0 8466 100587.1875 0.9520591841438528 -4 0.0986900329589843 5 nc|ENSG00000008838|O75448-2|MED24;ENSG00000008838|ENST00000394128|MED24 6 A{I|L} 2 -1 15.573 0.0 0.0 0.43785 0.0 0.0 3354.5693226413982 0.0 3354.5693226413982 0.0 3.979400086720375 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L} 0.43785 - 73 + 1 1.52 49198.9 1.0 2931 5538 8466 SUDHL4_400M_050219_2,8471 SUDHL4_400M_050219_2,8471, False False SLMDPPGTAL 45.908711 509.250415027142 879561.0625 8466.0 nc|ENSG00000008838|O75448-2|MED24;;ENSG00000008838|ENST00000394128|MED24 5.157798767089844 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8472 45.915 368.0 166740.0 25 0 16467.0 + 33798 SLDKDIVAL 9 103 487.28203170043446 972.5495104676688 2 487.2843505740166 MULTI CID FTMS 0 0 0 8466 90436.296875 0.6801173370772403 -1 0.0388526916503906 6 Unmodified _SLDKDIVAL_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 27.628801355627647 0.1796483985696185 6 {[TV]|[{I|L}S]}[RD]S{I|L}VA{I|L} 9 2 + 39.045 0.0 0.0 4.0147 4.0147 75.47 0.0 0.0 0.0 9.9563519459755 8.824995917031949 8.824995917031949 3.0102999566398125 0 0.7429928190999391 1.6989700043360187 0.3252574989159953 0.0 {[TV]|[{I|L}S]}[RD]S{I|L}VA{I|L};{[TV]|[{I|L}S]}[RD]SV{I|L}A{I|L};{[TV]|[{I|L}S]}[RD]VTVA{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KS]D{I|L}VA{I|L};{[TV]|[{I|L}S]}[TP][TA]TVA{I|L};{[TV]|[{I|L}S]}[RD]VS{I|L}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}[KS]DV{I|L}A{I|L};{[TV]|[{I|L}S]}[TP][TA]S{I|L}A{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WR]TVA{I|L};{[TV]|[{I|L}S]}[TP]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}A{I|L} 4.0147;3.7052;3.1897;2.991;2.9616;2.8801;2.6814;2.652;2.5706;2.471 -;-;-;-;-;-;-;-;-;- 408 1 1.52 50293.4 1.0 2932 5538 8466 SUDHL4_400M_050219_2,8472 SUDHL4_400M_050219_2,8472,SLDKDIVAL False True SLDKDIVAL 45.915334 487.284350574017 640873.4375 8466.0 nc|ENSG00000131747|P11388-4|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;nc|ENSG00000131747|P11388-2|TOP2A 4.010342518488566 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8473 45.927 669.0 162220.0 25 0 13874.0 + 26036 NMLEAVHTI 9 150 522.2631772022685 1042.5118014713369 2 522.2628661990166 MULTI CID FTMS 0 0 0 8466 86350.7109375 1.0 0 0.0 7 Oxidation (M) _NM(Oxidation (M))LEAVHTI_ ENSG00000112742|ENST00000369798|TTK;nc|ENSG00000112742|P33981-2|TTK 54.773552608820026 0.0299037012502309 6 [{I|L}T]HG{I|L}{M(Oxidation (M))|F}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 9 9 + 34.802 0.0 0.0 3.3383 3.3383 72.44 0.0 0.0 0.0 2.1579982715278234 2.1579982715278234 2.1579982715278234 2.1579982715278234 0 0.7742275032520141 0.6777807052660807 0.9247425010840048 0.0 [{I|L}T]HG{I|L}{M(Oxidation (M))|F}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}E{[VA]|[{I|L}G]}HT{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[W{I|L}]HT{I|L};[HT]{I|L}G{I|L}{M(Oxidation (M))|F}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}T]HGNQ{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[TV]|[{I|L}S]}[HA]{I|L}{M(Oxidation (M))|F}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}T]HG{I|L}E{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HT]{I|L}GNQ{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};{[{M(Oxidation (M))|F}H]|[RQ]}[RV]E{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}{M(Oxidation (M))|F}{I|L}GHPV 3.3383;3.1313;3.09;2.6882;2.5981;2.1555;2.0206;1.948;1.9253;1.7252 -;+;-;-;-;-;-;-;-;- + 282 1 1.52 84672.3 1.0 2933 5538 8466 SUDHL4_400M_050219_2,8473 SUDHL4_400M_050219_2,8473,NMLEAVHTI True False NMLEAVHTI 45.926984 522.262866199017 297924.34375 8466.0 ENSG00000112742|ENST00000369798|TTK;;nc|ENSG00000112742|P33981-2|TTK 6.152217864990234 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8474 45.937 542.0 214050.0 25 0 24935.0 5250 DKFLKEQIK 9 98 574.8362533610157 1147.6579537888313 2 574.8365356326103 MULTI CID FTMS 0 0 0 8466 151556.15625 1.0 0 0.0 8 Unmodified _DKFLKEQIK_ ENSG00000138385|ENST00000260956|SSB;ENST00000461708.1_1_2:170655414-170662397:+|nuORF 7.289230182591677 0.6602208344931196 6 D 1 8 0.9691 0.0 0.0 0.084442 0.0 0.0 574.3604206851188 455.2489107721313 1029.6093314572502 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + D 0.084442 + + 3 + 1 1.52 92182.6 1.0 2934 5538 8466 SUDHL4_400M_050219_2,8474 SUDHL4_400M_050219_2,8474,DKFLKEQIK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8476 45.942 72.0 656790.0 25 0 154540.0 + 17106 KLFHGEIWPA 10 80 599.3251970291125 1196.6358411250249 2 599.3245727419853 MULTI CID FTMS 0 0 0 8475 593077.8125 1.0 0 0.0 1 Unmodified _KLFHGEIWPA_ ENST00000447578.6_1_12:110930933-110930975:-|nuORF 18.721224879955976 0.5334180411911432 6 [VS]W{I|L}K{M(Oxidation (M))|F}[MT][VS] 10 10 + 48.371 0.0 0.0 4.0423 4.0423 75.65 0.0 0.0 0.0 30.2981853984274 0.4125791248290866 0.4125791248290866 3.0102999566398125 0 1.3807196863200843 0.0 1.2302046884880935 0.0 [VS]W{I|L}K{M(Oxidation (M))|F}[MT][VS];W[VS]K{I|L}{M(Oxidation (M))|F}[MT][VS];[HT][TP]{M(Oxidation (M))|F}K{I|L}W[PA];{[DA]|[EG]}[H{I|L}]{M(Oxidation (M))|F}K{I|L}W[PA];[HT][TP]{M(Oxidation (M))|F}{I|L}KW[PA];[VS]W[NP]K{I|L}W[PA];{[DA]|[EG]}[H{I|L}]{M(Oxidation (M))|F}{I|L}KW[PA];[VS]W[NP]K{I|L}[PA]W;[YE][YK]K{I|L}W[PA];[VS]W[NP]{I|L}KW[PA] 4.0423;3.7907;3.6734;3.5263;3.4219;3.3409;3.2747;3.2421;3.232;3.0893 -;-;-;-;-;-;-;-;-;- 298 + 1 1.52 40039.0 1.0 2935 5539 8475 SUDHL4_400M_050219_2,8476 SUDHL4_400M_050219_2,8476,KLFHGEIWPA False True KLFHGEIWPA 45.942109 599.324572741985 10027691.5 8475.0 ENST00000447578.6_1_12:110930933-110930975:-|nuORF 7.55585257212321 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8477 45.956 800.0 68665.0 25 0 19923.0 -1 0 38 748.5135483059452 747.5062718393451 1 748.5128661990166 MULTI CID FTMS 0 0 0 8475 47519.125 0.5666633283009411 1 -0.0777587890625 2 6 M 1 -1 3.9794 0.0 0.0 0.53236 0.0 0.0 171.14643144317148 442.29490076236567 613.4413322055372 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.53236 - 3 + 1 1.52 46767.5 0.4399999976158142 2936 5539 8475 SUDHL4_400M_050219_2,8477 SUDHL4_400M_050219_2,8477, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8478 45.959 151.0 516870.0 25 0 96455.0 + 11745 GLIEKNIEL 9 103 514.8028836609235 1027.591214388647 2 514.8029662966728 MULTI CID FTMS 0 0 0 8475 405886.25 0.0973465919294207 -5 0.1492233276367187 3 Unmodified _GLIEKNIEL_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 76.82478488871298 0.0184607444814265 6 {[VA]|[{I|L}G]}GEK{I|L}G{I|L}E{I|L} 10 3 + 91.495 0.0 0.0 8.9038 8.9038 89.503 0.0 0.0 0.0 12.20159303405957 15.026975159433531 12.20159303405957 4.771212547196626 0 1.1307196863200843 2.0 1.110924374808178 0.3494850021680094 {[VA]|[{I|L}G]}GEK{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}GKE{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}SN{I|L}{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}{I|L}EKGG{I|L}E{I|L};{[VA]|[{I|L}G]}{I|L}[NS]{I|L}G{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NK{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}{I|L}EKN{I|L}E{I|L};{[VA]|[{I|L}G]}GEK{I|L}E{[VA]|[{I|L}G]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EK{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}GEKE{I|L}{[VA]|[{I|L}G]}{I|L} 8.9038;8.4395;8.173;8.0429;7.8586;7.7164;7.7002;7.3305;7.2324;7.2063 -;-;-;-;-;-;+;-;-;- + 2199 1 1.52 62680.1 1.0 2937 5539 8475 SUDHL4_400M_050219_2,8478 SUDHL4_400M_050219_2,8478,GLIEKNIEL True True GLIEKNIEL 45.958971 514.802966296673 69549642.0 8475.0 ENSG00000130816|ENST00000359526|DNMT1;;nc|ENSG00000130816|P26358-3|DNMT1;;nc|ENSG00000130816|P26358|DNMT1 4.169156074523926 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8479 45.973 800.0 247810.0 25 0 33519.0 + 16993 KIWERIWSA 9 120 594.8298253053791 1187.6450976775582 2 594.8307372927666 MULTI CID FTMS 0 0 0 8475 155194.59375 0.3888821894303739 -2 0.089385986328125 4 Unmodified _KIWERIWSA_ ENST00000532383.5_1_11:10825070-10825157:-|nuORF 72.58957779350692 0.0200979202038191 6 K{I|L}WER{I|L}WSA 9 0 + 76.658 0.0 0.0 6.4546 6.4546 81.378 0.0 0.0 0.0 14.178374370451664 4.446691588633129 4.446691588633129 1.6457633604759394 0 2.4291746928241125 1.2218487496163564 1.079689690656103 0.0 + + K{I|L}WER{I|L}WSA;K{I|L}ADE{I|L}T[Q{I|L}]SA;K{I|L}ADE{[CT]|[{M(Oxidation (M))|F}G]}R[RP];[K{I|L}]DD{I|L}K{I|L}{[DA]|[EG]}SA;[K{I|L}]DD{I|L}K{I|L}{[SA]|[TG]}DA;[K{I|L}]DD{I|L}K[NG]KSA;[W{I|L}]{[RE]|[WV]}K{I|L}WSA;[K{I|L}]DD{I|L}K{I|L}{[ES]|[DT]|[{I|L}C]}GA;[K{I|L}]DD{I|L}{[DA]|[EG]}{I|L}KSA;K{I|L}[VS]E{[CT]|[{M(Oxidation (M))|F}G]}R[RP] 6.4546;6.316;5.6503;5.0796;4.6393;4.4882;4.2424;4.2376;4.1676;4.1575 +;-;-;-;-;-;-;-;-;- + 1535 + 1 1.52 146036.5 0.6200000047683716 2938 5539 8475 SUDHL4_400M_050219_2,8479 SUDHL4_400M_050219_2,8479,KIWERIWSA True True KIWERIWSA 45.972803 594.830737292767 3100171.125 8475.0 ENST00000532383.5_1_11:10825070-10825157:-|nuORF 6.894847234090169 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8480 45.987 800.0 91621.0 25 0 6884.6 + + 14606 LLSDLHAFAGSAA 13 87 636.8325168368716 0 636.8321411013603 PEAK CID FTMS 0 0 0 8475 87530.296875 0.8055783963437099 -2 0.089385986328125 5 Unmodified _IIEYFGELFAA_ nc|ENSG00000213402|Q14761|PTPRCAP 24.020572477871973 0.3025672323349825 6 SGA{I|L}{I|L}{M(Oxidation (M))|F}A 7 -1 41.178 0.0 0.0 3.2382 0.0 0.0 160.0836605274556 449.1794832818969 609.2631438093525 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.0 SGA{I|L}{I|L}{M(Oxidation (M))|F}A 3.2382 - 493 + 1 1.52 64809.8 0.4799999892711639 2939 5539 8475 SUDHL4_400M_050219_2,8480 SUDHL4_400M_050219_2,8480,IIEYFGELFAA False False LLSDLHAFAGSAA 45.98664 636.83214110136 666879.6875 8475.0 nc|ENSG00000213402|Q14761|PTPRCAP 3.4831697146097818 2.0 False 13.0 True nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 8481 46.0 800.0 145080.0 25 0 20684.0 + 44071 YITEGQIYV 9 140 543.2807523895807 1084.5469518459613 2 543.2820312380791 MULTI CID FTMS 0 0 0 8475 92615.609375 1.0 0 0.0 6 Unmodified _YITEGQIYV_ ENSG00000147416|ENST00000276390|ATP6V1B2;ENST00000523482.5_1_8:20073892-20074135:+|nuORF 37.97399986684836 0.0865783450051559 6 YAYT 4 7 48.66 0.0 0.0 4.4867 0.0 0.0 0.0 583.3204206392406 583.3204206392406 23.41903243759475 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.4247425010840047 0.0 YAYT 4.4867 - 945 + 1 1.52 90805.4 0.4600000083446502 2940 5539 8475 SUDHL4_400M_050219_2,8481 SUDHL4_400M_050219_2,8481,YITEGQIYV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8482 46.014 800.0 127360.0 25 0 9277.6 + 16994 KIWERIWSA 9 161 396.8887052925241 1187.6442864777723 3 396.8890258669853 MULTI CID FTMS 0 0 0 8475 75814.140625 0.429601316116952 -2 0.089385986328125 7 Unmodified _KIWERIWSA_ ENST00000532383.5_1_11:10825070-10825157:-|nuORF 15.738622578938676 0.4106572216562794 6 [K{I|L}]DD{I|L}WS{I|L}KA 10 5 + 46.49 0.0 0.0 3.9145 3.9145 80.481 0.0 0.0 0.0 12.08616630665805 14.73142367142291 12.08616630665805 9.164539485499247 0 0.0 0.8860566476931632 0.7059771852360797 0.6747425010840047 [K{I|L}]DD{I|L}WS{I|L}KA;[K{I|L}]DD{I|L}[VS]S{I|L}QA;[K{I|L}]DD{I|L}{[DA]|[EG]}S{I|L}KA;[K{I|L}]DD{I|L}[SG]E{I|L}KA;[K{I|L}]WEWD{I|L}KA;[K{I|L}]DD{I|L}{[SA]|[TG]}D{I|L}KA;[K{I|L}]DD{I|L}KEEKA;[K{I|L}]WEW{I|L}KDA;[K{I|L}]WEW{I|L}DKA;[K{I|L}]DD{I|L}{[SA]|[TG]}{I|L}KDA 3.9145;3.1428;3.1428;3.1283;3.1259;2.9946;2.7755;2.5756;2.5519;2.4442 -;-;-;-;-;-;-;-;-;- 1623 1 1.52 79473.4 0.949999988079071 2941 5539 8475 SUDHL4_400M_050219_2,8482 SUDHL4_400M_050219_2,8482,KIWERIWSA False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8484 46.021 128.0 162060.0 25 0 16187.0 + 26577 NVLRSALFML 10 44 582.3344689235521 1162.654384913904 2 582.3352538943291 MULTI CID FTMS 0 0 0 8483 416390.78125 0.8713787961237277 1 -0.0351066589355468 1 Unmodified _NVLRSALFML_ REV__nc|ENSG00000261716|Q6DN03|H2BC20P 0.6976657623105312 0.723409379185497 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 24556.7 1.0 2942 5540 8483 SUDHL4_400M_050219_2,8484 SUDHL4_400M_050219_2,8484,NVLRSALFML False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8485 46.027 335.0 200620.0 25 0 25918.0 + 19694 GLDALKVTV 9 102 458.7881170313744 915.5616811295488 2 458.7882263064384 MULTI CID FTMS 0 0 0 8483 113096.296875 0.0832103752793083 12 -0.5760421752929688 2 Unmodified _LGLSLTLTV_ ENSG00000159399|ENST00000290573|HK2;ENST00000447818.2_1_X:79827372-79827747:-|nuORF 13.50788311687929 0.4710407108020397 6 {[VA]|[{I|L}G]}EKVT 6 6 29.671 0.0 0.0 3.2407 0.0 0.0 0.0 285.1762190536302 285.1762190536302 19.186296826175003 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 {[VA]|[{I|L}G]}EKVT 3.2407 - 222 1 1.52 57696.2 1.0 2943 5540 8483 SUDHL4_400M_050219_2,8485 SUDHL4_400M_050219_2,8485,LGLSLTLTV False False GLDALKVTV 46.026856 458.788226306438 1159745.5 8483.0 ENSG00000159399|ENST00000290573|HK2;;ENST00000447818.2_1_X:79827372-79827747:-|nuORF 2.529326558113098 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8486 46.029 124.0 367720.0 25 0 74511.0 9779 FNIWKKLFV 9 64 597.8561903970555 1193.6978278609108 2 597.8564941287041 MULTI CID FTMS 0 0 0 8483 528062.75 0.822861695217003 -1 0.0777587890625 3 Unmodified _FNIWKKLFV_ ENSG00000205177|ENST00000379011|C11orf91;nc|nan|Q3C1V1-2|C11orf91 0.5247636613948944 0.8963649302248013 6 K 1 8 6.9897 0.0 0.0 0.58555 0.0 0.0 779.4511675599327 283.1191805475219 1062.5703481074547 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.58555 + + 4 + 1 1.52 38027.4 1.0 2944 5540 8483 SUDHL4_400M_050219_2,8486 SUDHL4_400M_050219_2,8486,FNIWKKLFV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8487 46.032 97.0 592730.0 25 0 79807.0 44269 YLLAEEPHVE 10 55 600.3005491252615 1198.5865453173228 2 600.3006469607353 MULTI CID FTMS 0 0 0 8483 359914.375 0.6172789615583828 -3 0.167144775390625 4 Unmodified _YLLAEEPHVE_ ENSG00000186150|ENST00000334179|UBL4B 14.838274106304384 0.5985701837916485 6 Y{I|L}YEDE 6 6 65.394 0.0 0.0 5.4559 0.0 0.0 0.0 383.24118982486567 383.24118982486567 47.23320034371433 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 Y{I|L}YEDE 5.4559 - 36 + 1 1.52 47488.9 1.0 2945 5540 8483 SUDHL4_400M_050219_2,8487 SUDHL4_400M_050219_2,8487,YLLAEEPHVE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8488 46.035 159.0 291700.0 25 0 32281.0 + 40627 VLDDKLYVV 9 85 532.3057019936563 1062.5968510541124 2 532.3054077029228 MULTI CID FTMS 0 0 0 8483 260380.8125 0.4890212140789891 -2 0.1282920837402343 5 Unmodified _VLDDKLYVV_ ENSG00000109790|ENST00000504108|KLHL5;nc|ENSG00000109790|Q96PQ7-2|KLHL5;nc|ENSG00000109790|Q96PQ7-3|KLHL5;nc|ENSG00000109790|Q96PQ7-4|KLHL5;nc|ENSG00000109790|Q96PQ7-5|KLHL5;nc|ENSG00000109790|Q96PQ7|KLHL5 29.081581746732265 0.1611639662936252 6 [{I|L}V]YKDD{I|L}VV 9 4 + 43.821 0.0 0.0 4.124 4.124 77.831 0.0 0.0 0.0 8.415149811213496 13.75955625825256 8.415149811213496 4.9595372608497 0 1.1237125054200234 2.0 0.0 0.3252574989159953 [{I|L}V]YKDD{I|L}VV;[{I|L}V]YWWVVV;[Y{I|L}]VKDD{I|L}VV;[Y{I|L}]VWWVVV 4.124;3.6572;1.8421;1.3753 -;-;-;- 163 1 1.52 47364.1 1.0 2946 5540 8483 SUDHL4_400M_050219_2,8488 SUDHL4_400M_050219_2,8488,VLDDKLYVV False True VLDDKLYVV 46.034702 532.305407702923 2326799.5 8483.0 nc|ENSG00000109790|Q96PQ7|KLHL5;;nc|ENSG00000109790|Q96PQ7-3|KLHL5;;ENSG00000109790|ENST00000504108|KLHL5;;nc|ENSG00000109790|Q96PQ7-4|KLHL5;;nc|ENSG00000109790|Q96PQ7-2|KLHL5;;nc|ENSG00000109790|Q96PQ7-5|KLHL5 3.639127731323242 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8489 46.039 225.0 221460.0 25 0 8275.8 -1 0 88 938.4334126746749 1874.8522724161496 2 938.9355346560478 MULTI CID FTMS 0 0 0 8483 243209.671875 0.6835647012035333 -4 0.2032737731933593 6 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YQ 13 -1 61.774 0.0 0.0 3.2949 0.0 0.0 0.0 341.1685401891338 341.1685401891338 37.57297705493069 0.0 0.0 0.0 0 0.2887254899964357 1.2218487496163564 0.0 0.6203715150305281 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YQ 3.2949 - 969 1 1.52 38068.8 1.0 2947 5540 8483 SUDHL4_400M_050219_2,8489 SUDHL4_400M_050219_2,8489, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8490 46.043 214.0 361150.0 25 0 50719.0 + 15011 ILSKDGVLYV 10 104 553.8266320351103 1105.6387111370204 2 553.8266479372978 MULTI CID FTMS 0 0 0 8483 238155.828125 0.4520737771949167 -4 0.2032737731933593 7 Unmodified _ILSKDGVLYV_ ENSG00000153107|ENST00000341068|ANAPC1;ENST00000454465.1_1_2:87398353-87423749:+|nuORF 36.506200033944 0.1944608063770638 6 {[TV]|[{I|L}S]}[PS]KS{I|L}{I|L}YV 10 5 + 47.865 0.0 0.0 4.3292 4.3292 73.856 0.0 0.0 0.0 2.498774732165998 2.648634946473223 2.498774732165998 1.249387366082999 0 0.7742275032520141 1.0 1.066901560044258 0.0 {[TV]|[{I|L}S]}[PS]KS{I|L}{I|L}YV;{[TV]|[{I|L}S]}[QA]S{I|L}{I|L}{I|L}YV;{[TV]|[{I|L}S]}[QA]{I|L}S{I|L}{I|L}YV;[KS][PS]S{I|L}{I|L}{I|L}YV;[KS]D[VG]{I|L}{I|L}{I|L}YV;{[QD]|[EN]|[WG]|[KD]|[RS]}[VG]S{I|L}{I|L}{I|L}YV;{[QD]|[EN]|[WG]|[KD]|[RS]}S[VG]{I|L}{I|L}{I|L}YV;[KS][PS]{I|L}S{I|L}{I|L}YV;{[QD]|[EN]|[WG]|[KD]|[RS]}[VG]{I|L}S{I|L}{I|L}YV;[KS]D{I|L}{I|L}[VG]{I|L}YV 4.3292;4.2162;3.7847;3.5315;3.5315;3.1342;3.1342;3.1;2.7027;1.1278 -;-;-;-;-;-;-;-;-;- 424 1 1.52 60101.6 1.0 2948 5540 8483 SUDHL4_400M_050219_2,8490 SUDHL4_400M_050219_2,8490,ILSKDGVLYV False True ILSKDGVLYV 46.043016 553.826647937298 3100567.25 8483.0 ENST00000454465.1_1_2:87398353-87423749:+|nuORF;;ENSG00000153107|ENST00000341068|ANAPC1 4.084879557291667 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8491 46.049 354.0 184890.0 25 0 47391.0 + 33921 SLGKVFGV 8 94 403.7420936602297 805.4696343872595 2 403.7419921755791 MULTI CID FTMS 0 0 0 8483 129389.4921875 0.6897263933640427 -2 0.1282920837402343 8 Unmodified _SLGKVFGV_ ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF 28.17323086031832 0.4514957916281387 6 {[TV]|[{I|L}S]}[KG]V{M(Oxidation (M))|F}GV 8 0 + 32.7 0.0 0.0 4.0598 4.0598 86.28 0.0 0.0 0.0 10.750029273583197 7.09183145787911 7.09183145787911 32.700491845627084 0 0.3807196863200844 2.0 0.0 0.0 + + {[TV]|[{I|L}S]}[KG]V{M(Oxidation (M))|F}GV 4.0598 + + 164 + 1 1.52 60187.4 1.0 2949 5540 8483 SUDHL4_400M_050219_2,8491 SUDHL4_400M_050219_2,8491,SLGKVFGV False True SLGKVFGV 46.049394 403.741992175579 958577.1875 8483.0 ENST00000558825.5_1_15:91337395-91358506:+|nuORF;;ENSG00000197299|ENST00000355112|BLM 0.0783556699752807 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8493 46.054 101.0 467260.0 25 0 68167.0 + 31743 RRVERPFAT 9 69 566.3221579520027 1130.6297629708054 2 566.3223144412041 MULTI CID FTMS 0 0 0 8492 469191.4375 0.8691779488846145 3 -0.0820808410644531 1 Unmodified _RRVERPFAT_ REV__ENSG00000187605|ENST00000409262|TET3;REV__nc|ENSG00000187605|O43151-2|TET3 2.059750862983233 0.8427793054688888 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.52 41240.5 1.0 2950 5541 8492 SUDHL4_400M_050219_2,8493 SUDHL4_400M_050219_2,8493,RRVERPFAT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8494 46.06 328.0 222460.0 25 0 31301.0 + 20599 LLPEGPPAI 9 99 453.76853477879104 905.522516624382 2 453.7681152224541 MULTI CID FTMS 0 0 0 8492 197366.078125 0.4158388634523204 -8 0.2798042297363281 2 Unmodified _LLPEGPPAI_ ENSG00000051108|ENST00000439977|HERPUD1;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 56.541270873467816 0.0279970378729908 6 {I|L}{I|L}[EP]GPPA{I|L} 9 0 + 62.814 0.0 0.0 6.9368 6.9368 94.206 0.0 0.0 0.0 7.697953115119063 14.973024840566469 7.697953115119063 19.931605754696943 0 1.3494850021680094 2.0 0.4247425010840047 0.0 + + {I|L}{I|L}[EP]GPPA{I|L};{I|L}{I|L}[EP]GP[{I|L}A]P;[EP]GPPA{I|L}{I|L}{I|L};[EP]GPAP{I|L}{I|L}{I|L};[PG]EPPA{I|L}{I|L}{I|L};[PG]EPAP{I|L}{I|L}{I|L};[PG]PAEP{I|L}{I|L}{I|L};[PG]PEAP{I|L}{I|L}{I|L};[PG]PEPA{I|L}{I|L}{I|L};[PA]DPPA{I|L}{I|L}{I|L} 6.9368;4.7357;3.9708;3.9708;3.5819;3.5819;2.8605;2.8605;2.8605;2.122 +;-;-;-;-;-;-;-;-;- + 333 + 1 1.52 61513.1 1.0 2951 5541 8492 SUDHL4_400M_050219_2,8494 SUDHL4_400M_050219_2,8494,LLPEGPPAI True False LLPEGPPAI 46.060131 453.768115222454 5833313.0 8492.0 nc|ENSG00000051108|Q15011-4|HERPUD1;;nc|ENSG00000051108|Q15011-2|HERPUD1;;nc|ENSG00000051108|Q15011-3|HERPUD1;;ENSG00000051108|ENST00000439977|HERPUD1 1.7915697793165843 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8495 46.071 595.0 143390.0 25 0 11963.0 + 12067 GQFGTINNF 9 120 499.24112269513 996.46769245706 2 499.2410766482353 MULTI CID FTMS 0 0 0 8492 117872.3203125 0.9021690579354232 -2 0.1128654479980468 3 Unmodified _GQFGTINNF_ ENSG00000126581|ENST00000590099|BECN1 28.486842064014134 0.1687311288560894 6 NN{M(Oxidation (M))|F} 3 6 18.544 0.0 0.0 1.861 0.0 0.0 603.30553532991 0.0 603.30553532991 0.0 2.7322734937822624 0.0 0.0 0 0.0 0.0 0.0 0.6861818737241735 + NN{M(Oxidation (M))|F} 1.861 + + 505 + 1 1.52 70065.0 1.0 2952 5541 8492 SUDHL4_400M_050219_2,8495 SUDHL4_400M_050219_2,8495,GQFGTINNF False True GQFGTINNF 46.070531 499.241076648235 663439.9375 8492.0 ENSG00000126581|ENST00000590099|BECN1 4.243523120880127 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8496 46.081 610.0 179010.0 25 0 27378.0 + 20579 LLNSEVHML 9 148 536.2792417153757 0 536.2792236208916 PEAK CID FTMS 0 0 0 8492 111620.4296875 0.8869705654389514 -1 0.0351066589355468 4 Oxidation (M) _LLNSEVHM(Oxidation (M))L_ ENSG00000144231|ENST00000272645|POLR2D 48.345845343767074 0.036192834052621 6 {I|L}NSEVH 6 3 35.706 0.0 0.0 3.3353 0.0 0.0 113.0814804016514 275.1074617975219 388.1889421991733 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3494850021680094 0.3807196863200844 + {I|L}NSEVH 3.3353 + + 272 + 1 1.52 87213.1 1.0 2953 5541 8492 SUDHL4_400M_050219_2,8496 SUDHL4_400M_050219_2,8496,LLNSEVHML True False LLNSEVHML 46.081198 536.279223620892 519782.15625 8492.0 ENSG00000144231|ENST00000272645|POLR2D 7.288228352864583 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8498 46.088 224.0 159050.0 25 0 18836.0 + 17105 KLFHGEIWPA 10 67 399.8854198094685 1196.6344300286055 3 399.8852416872978 MULTI CID FTMS 0 0 0 8497 159679.40625 0.2945056636136812 3 -0.1119880676269531 1 Unmodified _KLFHGEIWPA_ ENST00000447578.6_1_12:110930933-110930975:-|nuORF 7.945399516374404 0.6898843699695153 6 WW{I|L}K{I|L}A 6 8 25.406 0.0 0.0 2.1231 0.0 0.0 0.0 396.1406954401001 396.1406954401001 14.948500216800936 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WW{I|L}K{I|L}A 2.1231 - 28 + 1 1.52 32630.2 1.0 2954 5542 8497 SUDHL4_400M_050219_2,8498 SUDHL4_400M_050219_2,8498,KLFHGEIWPA False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8499 46.095 388.0 171150.0 25 0 24631.0 + -1 STPQAFVMPSM 11 76 614.2748149136158 1226.5350768940316 2 614.2754394412041 MULTI CID FTMS 0 0 0 8497 135083.484375 0.4953385592104049 3 -0.1119880676269531 2 2 Oxidation (M) _STPQAFVM(Oxidation (M))PSM(Oxidation (M))_ REV__ENSG00000151065|ENST00000280665|DCP1B;REV__ENST00000543381.5_1_12:2055374-2100299:-|nuORF;REV__nc|ENSG00000151065|Q8IZD4-2|DCP1B 21.53697664764585 0.586507868110548 6 {I|L}PS{M(Oxidation (M))|F} 4 -1 45.86 0.0 0.0 3.739 0.0 0.0 764.3208567786004 0.0 764.3208567786004 0.0 29.661903266879715 0.0 0.0 0 0.8807196863200843 0.0 0.75 0.0 {I|L}PS{M(Oxidation (M))|F} 3.739 - 45 + 1 1.52 53417.2 1.0 2955 5542 8497 SUDHL4_400M_050219_2,8499 SUDHL4_400M_050219_2,8499,STPQAFVMPSM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8500 46.097 88.0 529320.0 25 0 43486.0 + 18212 KVFDPVPVGV 10 68 528.808043785493 1055.601534637786 2 528.8082763552666 MULTI CID FTMS 0 0 0 8497 412351.46875 0.6521369130754092 -2 0.0669097900390625 3 Unmodified _KVFDPVPVGV_ ENSG00000135829|ENST00000367549|DHX9;ENST00000490519.1_1_1:182845328-182845691:+|nuORF 29.84058131909904 0.2982332456971691 6 V{M(Oxidation (M))|F}DPVPVR 8 3 39.813 0.0 0.0 3.7716 0.0 0.0 128.09527785468907 0.0 128.09527785468907 0.0 8.131003396960281 0.0 0.0 0 1.3182503180159344 0.0 0.0 0.0 V{M(Oxidation (M))|F}DPVPVR 3.7716 - 220 1 1.52 44040.4 1.0 2956 5542 8497 SUDHL4_400M_050219_2,8500 SUDHL4_400M_050219_2,8500,KVFDPVPVGV False True KVFDPVPVGV 46.0969 528.808276355267 3280404.0 8497.0 ENST00000490519.1_1_1:182845328-182845691:+|nuORF;;ENSG00000135829|ENST00000367549|DHX9 9.66786257425944 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8501 46.101 224.0 187670.0 25 0 25362.0 1559 ALLDQALSNA 10 95 508.2744525624283 1014.5343521916566 2 508.2745544314384 MULTI CID FTMS 0 0 0 8497 114200.1015625 0.8297670607700973 -2 0.0669097900390625 4 Unmodified _ALLDQALSNA_ ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1 36.12702656103203 0.1984647928738587 6 [{I|L}A]QD{I|L}A 6 5 44.684 0.0 0.0 4.4044 0.0 0.0 0.0 400.1848398227691 400.1848398227691 31.18948444925195 0.0 0.0 0.0 0 0.0 2.0 0.3252574989159953 0.3807196863200844 [{I|L}A]QD{I|L}A 4.4044 - 287 1 1.52 36248.7 1.0 2957 5542 8497 SUDHL4_400M_050219_2,8501 SUDHL4_400M_050219_2,8501,ALLDQALSNA False True ALDIQAAQSV 46.101116 508.274554431438 766099.0625 8497.0 ENSG00000236125|ENST00000526929|USP17L4;;ENSG00000232264|ENST00000504481|USP17L24;;ENSG00000225327|ENST00000530484|USP17L3;;ENSG00000232399|ENST00000429667|USP17L13;;ENSG00000235780|ENST00000515574|USP17L27;;ENSG00000250745|ENST00000506151|USP17L20;;ENSG00000230549|ENST00000529559|USP17L1;;ENSG00000231396|ENST00000417945|USP17L10;;ENSG00000231051|ENST00000504543|USP17L28;;ENSG00000249104|ENST00000511568|USP17L17;;ENSG00000230430|ENST00000509271|USP17L25;;ENSG00000248933|ENST00000511280|USP17L22;;ENSG00000226430|ENST00000530447|USP17L7;;ENSG00000231637|ENST00000511681|USP17L29;;ENSG00000229579|ENST00000509660|USP17L26;;ENSG00000227140|ENST00000507227|USP17L5;;ENSG00000250844|ENST00000504209|USP17L18;;ENSG00000223443|ENST00000333796|USP17L2;;ENSG00000223569|ENST00000456464|USP17L15;;nc|ENSG00000205946|Q6QN14|USP17L6P;;ENSG00000233136|ENST00000457736|USP17L11;;ENSG00000237038|ENST00000527080|USP17L8;;ENSG00000228856|ENST00000504104|USP17L30;;ENSG00000227551|ENST00000415041|USP17L12;;ENSG00000249811|ENST00000506414|USP17L21;;ENSG00000248920|ENST00000515566|USP17L19 -0.3280073801676432 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8503 46.119 800.0 143570.0 25 0 12080.0 + 9435 FLAKLIAQA 9 148 487.80500603348105 973.595459133762 2 487.8047363162041 MULTI CID FTMS 0 0 0 8502 87988.578125 0.5384887768081639 -4 0.1645927429199218 1 Unmodified _FLAKLIAQA_ ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF;nc|ENSG00000156261|P50990-2|CCT8;nc|ENSG00000156261|P50990-3|CCT8 54.773552608820026 0.0299037012502309 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AK{I|L}A{I|L}QA 9 2 + 33.993 0.0 0.0 3.4915 3.4915 72.29 0.0 0.0 0.0 2.287546220928615 6.637342758552698 2.287546220928615 1.7609125905568137 0 1.2104093769761874 0.0 0.3807196863200844 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AK{I|L}A{I|L}QA;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AK{I|L}{I|L}AQA;[{I|L}A]K{I|L}{M(Oxidation (M))|F}A{I|L}QA;[KA]{I|L}{I|L}{M(Oxidation (M))|F}A{I|L}QA;[{I|L}A]K{I|L}{M(Oxidation (M))|F}{I|L}AQA;[KA]{I|L}{I|L}{M(Oxidation (M))|F}{I|L}AQA;[{I|L}A]K{I|L}A{M(Oxidation (M))|F}{I|L}QA;[KA]{I|L}{I|L}A{M(Oxidation (M))|F}{I|L}QA;[{I|L}A]K{I|L}{I|L}{M(Oxidation (M))|F}AQA;[KA]{I|L}{I|L}{I|L}{M(Oxidation (M))|F}AQA 3.4915;3.3107;3.2566;3.2551;3.0757;3.0742;2.5387;2.5372;2.2765;2.275 -;+;-;-;-;-;-;-;-;- + 1156 1 1.52 90702.8 0.449999988079071 2958 5543 8502 SUDHL4_400M_050219_2,8503 SUDHL4_400M_050219_2,8503,FLAKLIAQA True True FLAKLIAQA 46.118808 487.804736316204 1294937.125 8502.0 ENST00000484403.5_1_21:30439206-30445917:-|nuORF;;nc|ENSG00000156261|P50990-3|CCT8;;nc|ENSG00000156261|P50990-2|CCT8;;ENSG00000156261|ENST00000286788|CCT8 5.147360324859619 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8504 46.131 730.0 87550.0 25 0 18396.0 + 18852 LASPHSPIL 9 108 467.7722194691688 933.5298860051377 2 467.7724792361259 MULTI CID FTMS 0 0 0 8502 102486.3671875 0.7907034538145155 6 -0.2207527160644531 2 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 44.40701690623563 0.0526327925666318 6 [{I|L}A][PS]H[PS]{I|L}{I|L} 9 0 + 39.586 0.0 0.0 4.2405 4.2405 75.223 0.0 0.0 0.0 2.174165578762484 13.132412039543064 2.174165578762484 2.174165578762484 0 0.8494850021680094 1.5228787452803376 0.75 0.0 + + [{I|L}A][PS]H[PS]{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A][PS]{I|L}{I|L};{[TV]|[{I|L}S]}[PA]H[PS]{I|L}{I|L};[VS][YR][PS]{I|L}{I|L};{I|L}{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[RP]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{[TV]|[{I|L}S]}{[WT]|[RM]}{[DS]|[MA]|[CV]|TT}{I|L}{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[MG]|[TS]}{I|L}{I|L};[R{M(Oxidation (M))|F}][{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}{I|L};[VG]{M(Oxidation (M))|F}[{I|L}A]{[DS]|[MA]|[CV]|TT}{I|L}{I|L} 4.2405;4.0076;3.3136;3.2997;2.7984;2.7228;2.6785;2.476;1.8893;1.6616 +;-;-;-;-;-;-;-;-;- + 248 1 1.52 54023.8 1.0 2959 5543 8502 SUDHL4_400M_050219_2,8504 SUDHL4_400M_050219_2,8504,LASPHSPIL True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8506 46.141 380.0 138130.0 25 0 20465.0 -1 VGRSRAIV 8 96 450.2746633814199 898.5347738296398 2 450.2749816775322 MULTI CID FTMS 0 0 0 8505 153368.59375 0.0516968460488729 18 -0.9332313537597656 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VGRSRAIV_ ENST00000536676.5_1_6:97372808-97372874:+|nuORF 0.7936320650641473 0.8195151834710337 6 V 1 -1 10.713 0.0 0.0 1.1923 0.0 0.0 781.45554059165 0.0 781.45554059165 0.0 0.9594276311945648 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.1923 + + 15 + 1 1.52 45471.1 1.0 2960 5544 8505 SUDHL4_400M_050219_2,8506 SUDHL4_400M_050219_2,8506,VGRSRAIV False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8507 46.155 800.0 165650.0 25 0 41148.0 + 20535 LLLSAEPVPA 10 139 505.3000461437287 1008.5855393542574 2 505.3005554080009 MULTI CID FTMS 0 0 0 8505 133022.5 0.0885401573601657 -5 0.1949462890625 2 Unmodified _LLLSAEPVPA_ ENSG00000007312|ENST00000006750|CD79B;ENST00000558969.1_1_17:62008689-62009627:-|nuORF;nc|ENSG00000007312|P40259-2|CD79B 26.88365393820708 0.3646707531412818 6 {[TV]|[{I|L}S]}AE{I|L}{I|L}P 7 5 45.76 0.0 0.0 4.5371 0.0 0.0 0.0 282.1441690752137 282.1441690752137 7.014099636583076 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.700061205686631 0.0 {[TV]|[{I|L}S]}AE{I|L}{I|L}P 4.5371 - 953 1 1.52 101009.7 0.5299999713897705 2961 5544 8505 SUDHL4_400M_050219_2,8507 SUDHL4_400M_050219_2,8507,LLLSAEPVPA False True LLLSAEPVPA 46.154653 505.300555408001 8346440.0 8505.0 ENSG00000007312|ENST00000006750|CD79B;;nc|ENSG00000007312|P40259-2|CD79B;;ENST00000558969.1_1_17:62008689-62009627:-|nuORF 5.15458869934082 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8508 46.168 800.0 148330.0 25 0 22225.0 42913 VVQEKIWSV 9 119 544.309802309944 1086.6050516866878 2 544.3101074099541 MULTI CID FTMS 0 0 0 8505 118217.6328125 0.3783814473112108 -5 0.1949462890625 3 Unmodified _VVQEKIWSV_ ENSG00000165072|ENST00000377182|MAMDC2 7.289230182591677 0.6602208344931196 6 V 1 8 10.596 0.0 0.0 0.97514 0.0 0.0 969.5256429726238 0.0 969.5256429726238 0.0 1.063040464407221 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.97514 + + 71 + 1 1.52 96685.1 0.5299999713897705 2962 5544 8505 SUDHL4_400M_050219_2,8508 SUDHL4_400M_050219_2,8508,VVQEKIWSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8509 46.182 800.0 79801.0 25 0 13819.0 + -1 AQMPTVHYEF 10 89 619.8688254335004 1237.7230979338008 2 619.8699218630791 MULTI CID FTMS 0 0 0 8505 93184.5703125 0.4307657998472337 18 -0.9332313537597656 4 2 Oxidation (M) _M(Oxidation (M))VKIFM(Oxidation (M))LLLV_ ENSG00000136518|ENST00000429709|ACTL6A;nc|ENSG00000136518|O96019-2|ACTL6A 3.944395688203298 0.708391353636983 6 {I|L} 1 -1 10.278 0.0 0.0 0.83036 0.0 0.0 1106.628369395518 0.0 1106.628369395518 0.0 0.5998765853837451 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.83036 + + 36 + 1 1.52 54734.8 0.4900000095367431 2963 5544 8505 SUDHL4_400M_050219_2,8509 SUDHL4_400M_050219_2,8509,MVKIFMLLLV False False AQMPTVHYEF 46.182322 619.869921863079 117320.421875 8505.0 ENSG00000136518|ENST00000429709|ACTL6A;;nc|ENSG00000136518|O96019-2|ACTL6A 4.036875247955322 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8510 46.193 622.0 178420.0 25 0 19275.0 + 44181 YLEPYLKEV 9 125 577.3087450720842 1152.6029372109683 2 577.3077270388603 MULTI CID FTMS 0 0 0 8505 104094.703125 0.7621528343829141 -3 0.0820808410644531 5 Unmodified _YLEPYLKEV_ ENSG00000156467|ENST00000287022|UQCRB;ENST00000518876.1_1_8:97243285-97244208:-|nuORF;ENST00000521036.5_1_8:97243285-97243480:-|nuORF 43.77239144664712 0.0547478964384323 6 [Y{I|L}]EPKVE{I|L}Y 9 5 + 53.176 0.0 0.0 4.6135 4.6135 74.524 0.0 0.0 0.0 3.1037800408849705 3.880879653810453 3.1037800408849705 1.1978875828839364 0 1.4124379954164592 2.0 0.6989700043360187 0.0 [Y{I|L}]EPKVE{I|L}Y;[Y{I|L}]PKEVE{I|L}Y;[Y{I|L}]PEKVE{I|L}Y;[Y{I|L}]{M(Oxidation (M))|F}VEK{I|L}{[QN]|[E{I|L}]|[KN]};[Y{I|L}]{M(Oxidation (M))|F}VKE{I|L}{[QN]|[E{I|L}]|[KN]};[Y{I|L}]{M(Oxidation (M))|F}VEKQQV;[Y{I|L}]{M(Oxidation (M))|F}VKEQQV;[Y{I|L}]E[{M(Oxidation (M))|F}V]K{I|L}{[QN]|[E{I|L}]|[KN]};[Y{I|L}]PK[{M(Oxidation (M))|F}V]N{[WS]|[C(Carbamidomethyl (C)){I|L}]};[Y{I|L}]{M(Oxidation (M))|F}VKP{[CA]|SS}NV 4.6135;4.5096;4.4409;4.3442;4.2755;3.9001;3.8314;3.8019;3.7882;3.5032 -;-;-;-;-;-;-;-;-;- 1248 1 1.52 84076.7 1.0 2964 5544 8505 SUDHL4_400M_050219_2,8510 SUDHL4_400M_050219_2,8510,YLEPYLKEV True True YLEPYLKEV 46.193187 577.30772703886 682113.1875 8505.0 ENST00000521036.5_1_8:97243285-97243480:-|nuORF;;ENSG00000156467|ENST00000287022|UQCRB;;ENST00000518876.1_1_8:97243285-97244208:-|nuORF 3.8304409980773926 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8512 46.198 44.0 886950.0 25 0 193190.0 -1 KELRKLMML 9 59 589.3430741013665 1176.6715952695329 2 589.3431884646416 MULTI CID FTMS 0 0 0 8511 1103100.0 0.7195530434725886 4 -0.1286888122558593 1 Oxidation (M) _KELRKLM(Oxidation (M))ML_ REV1|p.E65K|1|0.22|ENSG00000135945|chr2:99449493-99449493|C/T|missense_variant 0.6014990680409731 0.8936861360942873 6 H 1 -1 5.4846 0.0 0.0 0.46611 0.0 0.0 55.70084439238287 980.8647554986936 1036.5655998910763 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.46611 - 1 + 1 1.52 39637.3 1.0 2965 5545 8511 SUDHL4_400M_050219_2,8512 SUDHL4_400M_050219_2,8512,KELRKLMML False False False False variant PXD020620_cell_line SUDHL4_400M_050219_2 8513 46.208 546.0 156940.0 25 0 18928.0 + 39025 TVTIKSKSRE 10 97 574.8362533610157 1147.6579537888313 2 574.8362304568291 MULTI CID FTMS 0 0 0 8511 69851.9140625 0.4608978994378527 7 -0.3971443176269531 2 Unmodified _TVTIKSKSRE_ REV__ENSG00000116251|ENST00000234875|RPL22;REV__ENST00000469811.1_1_14:77352823-77353039:-|nuORF 5.731851221503515 0.7001233259664787 6 D 1 -1 2.4743 0.0 0.0 0.21559 0.0 0.0 574.3637776187126 455.2503450983032 1029.6141227170158 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.21559 - 24 + 1 1.52 69760.6 1.0 2966 5545 8511 SUDHL4_400M_050219_2,8513 SUDHL4_400M_050219_2,8513,TVTIKSKSRE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8515 46.213 20.0 2532800.0 25 0 455580.0 + 11746 GLIEKNIEL 9 88 514.8028836609235 1027.591214388647 2 514.8031494021416 MULTI CID FTMS 0 0 0 8514 2938574.0 0.7047791444829816 2 -0.0569953918457031 1 Unmodified _GLIEKNIEL_ ENSG00000130816|ENST00000359526|DNMT1;nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1 69.10491478415734 0.0214449631113747 6 {[VA]|[{I|L}G]}SN{I|L}{I|L}G{I|L}E{I|L} 10 5 + 71.353 0.0 0.0 6.9437 6.9437 86.04 0.0 0.0 0.0 6.49166239860314 42.10963051171021 6.49166239860314 4.259687322722812 0 1.1237125054200234 2.0 1.1549471895720984 0.3494850021680094 {[VA]|[{I|L}G]}SN{I|L}{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}S{I|L}N{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}{I|L}SN{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}{I|L}EGKG{I|L}E{I|L};{[VA]|[{I|L}G]}GEK{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}SGG{I|L}{I|L}G{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NK{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}S{I|L}GG{I|L}G{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}KN{I|L}G{I|L}E{I|L};{[VA]|[{I|L}G]}{I|L}SGG{I|L}G{I|L}E{I|L} 6.9437;6.5292;6.3866;5.8751;5.8057;5.7118;5.3636;5.2973;5.165;5.1546 -;-;-;-;-;-;-;-;-;- 1313 1 1.52 44969.2 1.0 2967 5546 8514 SUDHL4_400M_050219_2,8515 SUDHL4_400M_050219_2,8515,GLIEKNIEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8516 46.22 402.0 315910.0 25 0 96421.0 7667 EKKKTYIMKP 10 85 633.3690769768929 1264.7236010205856 2 633.3694946169853 MULTI CID FTMS 0 0 0 8514 170371.296875 0.3011818329268506 -5 0.1584892272949218 2 Unmodified _EKKKTYIMKP_ ENST00000272793.9_1_2:170938445-170938493:+|nuORF 3.2813086475875832 0.7114585191678878 6 D 1 10 11.237 0.0 0.0 0.8885 0.0 0.0 686.3607891863979 460.3073634265582 1146.6681526129562 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D 0.8885 - 10 + 1 1.52 99568.4 1.0 2968 5546 8514 SUDHL4_400M_050219_2,8516 SUDHL4_400M_050219_2,8516,EKKKTYIMKP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8517 46.226 357.0 204100.0 25 0 15692.0 + 715 AEPEDHYFL 9 97 560.7509032272991 1119.487253521398 2 560.7509643435478 MULTI CID FTMS 0 0 0 8514 146966.265625 0.6475512805463867 -3 0.1067619323730468 3 Unmodified _AEPEDHYFL_ ENSG00000115091|ENST00000263238|ACTR3;ENSG00000133627|ENST00000256001|ACTR3B;ENST00000489779.1_1_2:114684960-114691984:+|nuORF;ENST00000541653.2_1_14:22054224-22054383:-|nuORF;nc|ENSG00000133627|Q9P1U1-2|ACTR3B;nc|ENSG00000133627|Q9P1U1-3|ACTR3B 23.1484247019978 0.2366544122328345 6 [HD]YEP{M(Oxidation (M))|F} 6 7 31.661 0.0 0.0 2.8281 0.0 0.0 0.0 328.1530316695968 328.1530316695968 16.95554701812867 0.0 0.0 0.0 0 0.3494850021680094 1.3010299956639813 0.3807196863200844 0.0 [HD]YEP{M(Oxidation (M))|F} 2.8281 - 166 1 1.52 61223.2 1.0 2969 5546 8514 SUDHL4_400M_050219_2,8517 SUDHL4_400M_050219_2,8517,AEPEDHYFL False True AEPEDHYFL 46.226334 560.750964343548 1792975.25 8514.0 nc|ENSG00000133627|Q9P1U1-3|ACTR3B;;ENST00000489779.1_1_2:114684960-114691984:+|nuORF;;ENSG00000115091|ENST00000263238|ACTR3;;ENST00000541653.2_1_14:22054224-22054383:-|nuORF;;nc|ENSG00000133627|Q9P1U1-2|ACTR3B;;ENSG00000133627|ENST00000256001|ACTR3B 4.229690154393514 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8518 46.236 526.0 248860.0 25 0 35803.0 + 17428 KMYEEFLSKV 10 120 645.3254240725222 1288.6362952118443 2 645.3252441287041 MULTI CID FTMS 0 0 0 8514 123714.9453125 0.5671577552899044 -1 0.0146980285644531 4 Oxidation (M) _KM(Oxidation (M))YEEFLSKV_ ENSG00000108946|ENST00000589228|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;nc|ENSG00000108946|P10644-2|PRKAR1A 82.44511118730084 0.0150639512906888 6 K{M(Oxidation (M))|F}YEE{M(Oxidation (M))|F}{I|L}SKV 10 0 + 77.214 0.0 0.0 5.9919 5.9919 60.642 0.0 0.0 0.0 13.73326587594945 0.0 0.0 0.0 0 3.2302046884880937 0.0 0.3807196863200844 0.2614393726401688 + + K{M(Oxidation (M))|F}YEE{M(Oxidation (M))|F}{I|L}SKV;K{M(Oxidation (M))|F}YEE{M(Oxidation (M))|F}{I|L}SVK;KY{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}{I|L}SKV;KY{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}{I|L}SVK;K{M(Oxidation (M))|F}YEE{M(Oxidation (M))|F}{I|L}VSK;YK{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}{I|L}SKV;YK{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}{I|L}SVK;KY{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}{I|L}VSK;YK{M(Oxidation (M))|F}EE{M(Oxidation (M))|F}{I|L}VSK;V{[CA]|SS}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}E{M(Oxidation (M))|F}{I|L}SKV 5.9919;5.9919;5.4509;5.4509;5.1582;4.9262;4.9262;4.6172;4.0925;3.606 +;-;-;-;-;-;-;-;-;- + 1214 + 1 1.52 105069.0 1.0 2970 5546 8514 SUDHL4_400M_050219_2,8518 SUDHL4_400M_050219_2,8518,KMYEEFLSKV True False KMYEEFLSKV 46.235613 645.325244128704 2121995.125 8514.0 ENSG00000188191|ENST00000537384|PRKAR1B;;ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 5.020079930623372 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8520 46.247 481.0 173010.0 25 0 34704.0 + 17427 KMYEEFLSKV 10 103 637.3301243536013 1272.6456957740024 2 637.3292724490166 MULTI CID FTMS 0 0 0 8519 150131.75 0.9321437070468468 2 -0.0862655639648437 1 Unmodified _KMYEEFLSKV_ ENSG00000108946|ENST00000589228|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;nc|ENSG00000108946|P10644-2|PRKAR1A 61.52268572086107 0.0325919002847071 6 KMYEE{M(Oxidation (M))|F}{I|L}SKV 10 0 + 80.334 0.0 0.0 6.3124 6.3124 91.653 0.0 0.0 0.0 42.84465464368084 11.25447181216778 11.25447181216778 14.03124877910804 0 2.4489700043360187 0.0 0.0 0.2302046884880938 + + KMYEE{M(Oxidation (M))|F}{I|L}SKV;KMYEE{M(Oxidation (M))|F}{I|L}V[KS];V[WH]EE{M(Oxidation (M))|F}{I|L}SKV;KE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}E{M(Oxidation (M))|F}{I|L}SKV;V[WH]EE{M(Oxidation (M))|F}{I|L}V[KS];VAS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}E{M(Oxidation (M))|F}{I|L}SKV;KE{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}E{M(Oxidation (M))|F}{I|L}V[KS];VAS{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}E{M(Oxidation (M))|F}{I|L}V[KS];[{I|L}V][Y{M(Oxidation (M))|F}][KA]EY[Q{I|L}] 6.3124;5.2098;4.5644;4.2327;3.4619;3.3386;3.1301;2.2361;1.0084 +;-;-;-;-;-;-;-;- + 632 + 1 1.52 71911.5 1.0 2971 5547 8519 SUDHL4_400M_050219_2,8520 SUDHL4_400M_050219_2,8520,KMYEEFLSKV True True KMYEEFLSKV 46.24669 637.329272449017 928485.1875 8519.0 ENSG00000188191|ENST00000537384|PRKAR1B;;ENSG00000108946|ENST00000589228|PRKAR1A;;nc|ENSG00000108946|P10644-2|PRKAR1A 6.332029342651367 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8521 46.251 200.0 251780.0 25 0 30243.0 + 40929 VLSSDGVWRV 10 79 559.3038909233233 1116.5932289134464 2 559.3038818240166 MULTI CID FTMS 0 0 0 8519 232422.46875 1.0 0 0.0 2 Unmodified _VLSSDGVWRV_ ENSG00000125459|ENST00000245564|MSTO1;ENST00000483734.5_1_1:155580745-155584061:+|nuORF;ENST00000488901.5_1_1:155581342-155581721:+|nuORF;nc|ENSG00000125459|Q9BUK6-2|MSTO1;nc|ENSG00000125459|Q9BUK6-3|MSTO1 43.9818466556824 0.1155196613165264 6 V{I|L}SSDGVW[RV] 10 0 + 92.428 0.0 0.0 8.2777 8.2777 97.218 0.0 0.0 0.0 85.438134727926 5.764837301042718 5.764837301042718 26.07963467823147 0 1.305462187404089 2.0 0.4247425010840047 0.0 + + V{I|L}SSDGVW[RV];V{I|L}{[C(Carbamidomethyl (C))E]|[WC]}GVW[RV];V{I|L}{[C(Carbamidomethyl (C))E]|[WC]}RW[RV];V{I|L}[WC(Carbamidomethyl (C))]VW[RV];V{I|L}V[WC(Carbamidomethyl (C))]W[RV];V{[WT]|[RM]}DGVW[RV];V{[WT]|[RM]}DRW[RV] 8.2777;5.942;5.4533;4.9815;4.8033;3.3901;2.9013 +;-;-;-;-;-;- + 159 + 1 1.52 45901.1 1.0 2972 5547 8519 SUDHL4_400M_050219_2,8521 SUDHL4_400M_050219_2,8521,VLSSDGVWRV True True VLSSDGVWRV 46.250523 559.303881824017 974702.0 8519.0 ENST00000483734.5_1_1:155580745-155584061:+|nuORF;;ENST00000488901.5_1_1:155581342-155581721:+|nuORF;;ENSG00000125459|ENST00000245564|MSTO1;;nc|ENSG00000125459|Q9BUK6-3|MSTO1;;nc|ENSG00000125459|Q9BUK6-2|MSTO1 6.632213751475017 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8522 46.256 274.0 184320.0 25 0 19970.0 + 1792 ALSFIRDEV 9 85 525.2849195916299 0 525.2848998904228 PEAK CID FTMS 0 0 0 8519 126183.9375 0.5177707914788524 7 -0.4457359313964844 3 Unmodified _ALSFIRDEV_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 29.081581746732265 0.1187435359889091 6 S{M(Oxidation (M))|F}{I|L} 3 6 24.693 0.0 0.0 2.3549 0.0 0.0 184.1209195405251 514.2268160455686 698.3477355860937 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.4247425010840047 0.0 + S{M(Oxidation (M))|F}{I|L} 2.3549 + + 41 + 1 1.52 44648.0 1.0 2973 5547 8519 SUDHL4_400M_050219_2,8522 SUDHL4_400M_050219_2,8522,ALSFIRDEV True True ALSFIRDEV 46.255592 525.284899890423 2206994.0 8519.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 4.7976250648498535 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8523 46.265 527.0 204360.0 25 0 18046.0 + 44073 YITERIIAV 9 122 539.3187516431117 1076.6229503530233 2 539.3189575076103 MULTI CID FTMS 0 0 0 8519 123723.7734375 0.5356708619533198 -2 0.0424232482910156 4 Unmodified _YITERIIAV_ ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3;nc|ENSG00000136205|Q68CZ2-3|TNS3;nc|ENSG00000136205|Q68CZ2-4|TNS3 41.95555342248728 0.0647214845423414 6 Y{I|L}T 3 6 42.945 0.0 0.0 3.9889 0.0 0.0 0.0 696.4055880182249 696.4055880182249 16.964110153562416 0.0 0.0 0.0 0 0.3252574989159953 1.6989700043360187 0.0 0.0 + Y{I|L}T 3.9889 + + 368 + 1 1.52 88495.0 1.0 2974 5547 8519 SUDHL4_400M_050219_2,8523 SUDHL4_400M_050219_2,8523,YITERIIAV True True YITERIIAV 46.264878 539.31895750761 1626754.875 8519.0 nc|ENSG00000136205|Q68CZ2-2|TNS3;;nc|ENSG00000136205|Q68CZ2-3|TNS3;;nc|ENSG00000136205|Q68CZ2-4|TNS3;;ENSG00000136205|ENST00000311160|TNS3 5.484220663706462 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8525 46.28 670.0 160370.0 25 0 33163.0 10800 FYQQTLPGSHI 11 97 430.88819076855873 0 430.8877441287041 PEAK CID FTMS 0 0 0 8524 168853.421875 0.6045527723752551 -6 0.1836814880371093 1 Unmodified _FYQQTLPGSHI_ ENSG00000116127|ENST00000613296|ALMS1;nc|ENSG00000116127|Q8TCU4-2|ALMS1;nc|ENSG00000116127|Q8TCU4-3|ALMS1 2.9952420565917617 0.4761840153648598 6 E 1 11 11.237 0.0 0.0 1.307 0.0 0.0 163.48370467989247 564.2114962213499 727.6952009012423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E 1.307 - 15 + 1 1.52 92235.2 1.0 2975 5548 8524 SUDHL4_400M_050219_2,8525 SUDHL4_400M_050219_2,8525,FYQQTLPGSHI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8526 46.294 800.0 191320.0 25 0 30435.0 + -1 VQLDCFSQLD 10 145 612.7837415690454 0 612.7830078005791 PEAK CID FTMS 0 0 0 8524 137520.96875 0.381241234412968 -1 0.0292701721191406 2 Carbamidomethyl (C) _VQLDC(Carbamidomethyl (C))FSQLD_ REV__ENSG00000153157|ENST00000283141|SYCP2L 20.41453444215458 0.2949319999315323 6 VST{I|L}GE 6 -1 20.909 0.0 0.0 1.7089 0.0 0.0 245.1335434287292 389.0966890924438 634.230232521173 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2059771852360797 0.0 VST{I|L}GE 1.7089 - 1309 + 1 1.52 117609.8 0.449999988079071 2976 5548 8524 SUDHL4_400M_050219_2,8526 SUDHL4_400M_050219_2,8526,VQLDCFSQLD False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8527 46.308 800.0 216810.0 25 0 19746.0 + 40684 VLFGVETHV 9 164 500.7772874340731 999.5400219349464 2 500.7786437869072 MULTI CID FTMS 0 0 0 8524 84849.5546875 0.4087993421114539 -1 0.0292701721191406 3 Unmodified _VLFGVETHV_ ENSG00000066583|ENST00000173527|ISOC1 50.855029805455786 0.0384952370514206 6 [{I|L}V]{M(Oxidation (M))|F}GVETHV 9 0 + 73.931 0.0 0.0 7.3965 7.3965 86.027 0.0 0.0 0.0 27.14764271519251 3.136597640453488 3.136597640453488 3.136597640453488 0 0.4247425010840047 2.0 1.086696871556164 0.0 + + [{I|L}V]{M(Oxidation (M))|F}GVETHV;[{I|L}V]{M(Oxidation (M))|F}GVEHS{I|L};[{I|L}V]{M(Oxidation (M))|F}GVETVH;[{I|L}V]{M(Oxidation (M))|F}GVEHTV;[{I|L}V]{M(Oxidation (M))|F}RETHV;[{I|L}V]{M(Oxidation (M))|F}REHS{I|L};[{I|L}V]{M(Oxidation (M))|F}RETVH;[{I|L}V]{M(Oxidation (M))|F}REHTV;[{I|L}V]V[W{M(Oxidation (M))|F}]THV;[{I|L}V]{M(Oxidation (M))|F}G[HN]SKV 7.3965;7.0827;6.9761;6.9178;6.7484;6.4346;6.328;6.2697;4.5911;4.4179 +;-;-;-;-;-;-;-;-;- + 1571 + 1 1.52 134562.3 0.3400000035762787 2977 5548 8524 SUDHL4_400M_050219_2,8527 SUDHL4_400M_050219_2,8527,VLFGVETHV True True VLFGVETHV 46.308046 500.778643786907 847982.375 8524.0 ENSG00000066583|ENST00000173527|ISOC1 8.037714640299479 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8528 46.322 800.0 108360.0 25 0 8880.9 -1 0 82 769.6935664498567 2306.05886994977 3 770.0275756716728 MULTI CID FTMS 0 0 0 8524 80811.859375 0.5667497182940084 -1 0.0292701721191406 4 6 P[YR]Q[HD]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 11 -1 37.038 0.0 0.0 1.6061 0.0 0.0 924.4559193341812 0.0 924.4559193341812 0.0 10.38297005497878 0.0 0.0 0 0.5 0.0 0.805462187404089 0.4247425010840047 P[YR]Q[HD]{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 1.6061 - 216 1 1.52 70912.6 0.3100000023841858 2978 5548 8524 SUDHL4_400M_050219_2,8528 SUDHL4_400M_050219_2,8528, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8530 46.327 51.0 989700.0 25 0 187160.0 + 20600 LLPEGPPAI 9 75 453.76853477879104 905.522516624382 2 453.7682983279228 MULTI CID FTMS 0 0 0 8529 474621.53125 1.0 0 0.0 1 Unmodified _LLPEGPPAI_ ENSG00000051108|ENST00000439977|HERPUD1;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 26.34127834903884 0.1960301806784604 6 [VP]{I|L}SG 5 8 23.382 0.0 0.0 2.5822 0.0 0.0 0.0 449.2422181226821 449.2422181226821 7.184086274290262 0.0 0.0 0.0 0 0.3494850021680094 1.0969100130080565 0.2887254899964357 0.0 [VP]{I|L}SG 2.5822 - 169 1 1.52 43721.8 1.0 2979 5549 8529 SUDHL4_400M_050219_2,8530 SUDHL4_400M_050219_2,8530,LLPEGPPAI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8531 46.331 214.0 225990.0 25 0 41955.0 7660 EKIQALPTVPV 11 67 597.8561903970555 1193.6978278609108 2 597.8565551638603 MULTI CID FTMS 0 0 0 8529 269013.65625 0.4191945620447553 8 -0.4407844543457031 2 Unmodified _EKIQALPTVPV_ ENSG00000070423|ENST00000292363|RNF126 1.0714618166137932 0.8700927088084459 6 K 1 10 2.2185 0.0 0.0 0.18585 0.0 0.0 779.4517473939171 283.1191805475219 1062.570927941439 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + K 0.18585 + + 1 + 1 1.52 43576.1 1.0 2980 5549 8529 SUDHL4_400M_050219_2,8531 SUDHL4_400M_050219_2,8531,EKIQALPTVPV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8532 46.332 37.0 1076900.0 25 0 283550.0 + 37846 TLTSKLYSL 9 55 513.2976164331014 1024.5806799330028 2 513.2977172732353 MULTI CID FTMS 0 0 0 8529 1403521.0 0.947250622583558 2 -0.2051620483398437 3 Unmodified _TLTSKLYSL_ ENSG00000184076|ENST00000330029|UQCR10;nc|ENSG00000184076|Q9UDW1-2|UQCR10 22.736283301280096 0.2418982879461534 6 [{I|L}T][KS]YS{I|L}T{I|L} 9 4 + 52.043 0.0 0.0 5.0794 5.0794 87.533 0.0 0.0 0.0 8.8553779588527 16.241436528314566 8.8553779588527 14.03089986991943 0 0.718765315847925 2.0 0.7742275032520141 0.0 [{I|L}T][KS]YS{I|L}T{I|L};[KS]T{I|L}YS{I|L}T{I|L} 5.0794;3.71 -;- 131 1 1.52 34573.8 1.0 2981 5549 8529 SUDHL4_400M_050219_2,8532 SUDHL4_400M_050219_2,8532,TLTSKLYSL False True TLTSKLYSL 46.331906 513.297717273235 9570675.0 8529.0 ENSG00000184076|ENST00000330029|UQCR10;;nc|ENSG00000184076|Q9UDW1-2|UQCR10 4.471283674240112 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8533 46.333 54.0 972040.0 25 0 167300.0 15013 ILSLHLLV 8 68 454.3024725070714 906.5903920809428 2 454.3022338747978 MULTI CID FTMS 0 0 0 8529 916089.8125 0.2269506771311391 -2 0.0862655639648437 4 Unmodified _ILSLHLLV_ MER67C_dup844|chrX:304137-304231:+|1.13502019807356|0.4718080530988913|1.27|48.0|5|3|sense;nc|ENSG00000127603|O94854-4|MACF1;nc|ENSG00000127603|O94854|MACF1 28.17323086031832 0.4514957916281387 6 [VP]KVGPV{I|L}V 9 7 + 62.29 0.0 0.0 6.8708 6.8708 87.142 0.0 0.0 0.0 16.100067642479345 46.80577499866146 16.100067642479345 6.020599913279625 0 0.5 1.0457574905606752 0.0 0.0 [VP]KVGPV{I|L}V;[VP]GVKPV{I|L}V;[VP]GVPKV{I|L}V;[PG]VVKPV{I|L}V;[PG]VVPKV{I|L}V 6.8708;6.2067;5.5426;4.0571;3.393 -;-;-;-;- 221 1 1.52 43114.1 1.0 2982 5549 8529 SUDHL4_400M_050219_2,8533 SUDHL4_400M_050219_2,8533,ILSLHLLV False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_2 8534 46.337 216.0 298940.0 25 0 37997.0 + 40600 VLADALKSI 9 76 465.2869521089421 928.559351284684 2 465.2870056033134 MULTI CID FTMS 0 0 0 8529 291854.21875 0.8212565293004128 -1 0.0569953918457031 5 Unmodified _VLADALKSI_ ENSG00000134419|ENST00000322989|RPS15A;ENST00000573554.1_1_16:18800267-18800435:-|nuORF 31.26834338654808 0.1333407332142048 6 [{I|L}V]ADA{I|L}KS{I|L} 9 0 + 58.129 0.0 0.0 6.2601 6.2601 79.716 0.0 0.0 0.0 24.907068613224617 0.9177037335564506 0.9177037335564506 0.9177037335564506 0 0.7134679910804405 2.0 0.4247425010840047 0.0 + + [{I|L}V]ADA{I|L}KS{I|L};[{I|L}V]ADA{I|L}KTV;[{I|L}V]A{[CP]|[EA]}[KS][{I|L}V];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[KS]{I|L}[{I|L}V];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{I|L}[KS][{I|L}V] 6.2601;6.1613;1.8826;0.95567;0.045551 +;-;-;-;- + 113 + 1 1.52 57358.2 1.0 2983 5549 8529 SUDHL4_400M_050219_2,8534 SUDHL4_400M_050219_2,8534,VLADALKSI False True VLADALKSI 46.337371 465.287005603313 2448920.75 8529.0 ENSG00000134419|ENST00000322989|RPS15A;;ENST00000573554.1_1_16:18800267-18800435:-|nuORF 2.740354617436727 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8535 46.342 260.0 297870.0 25 0 39436.0 + 42927 VVRHLTVL 8 61 468.8032368588554 935.5919207845108 2 468.8031188845634 MULTI CID FTMS 0 0 0 8529 248297.765625 1.0 0 0.0 6 Unmodified _VVRHLTVL_ REV__ENSG00000158246|ENST00000289166|TENT5B 18.13498045792455 0.6430038125133779 6 VWH{I|L}VV{I|L} 7 -1 47.026 0.0 0.0 5.0264 0.0 0.0 71.07426650215 0.0 71.07426650215 0.0 36.057291669019165 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 VWH{I|L}VV{I|L} 5.0264 - 38 1 1.52 63977.8 1.0 2984 5549 8529 SUDHL4_400M_050219_2,8535 SUDHL4_400M_050219_2,8535,VVRHLTVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8536 46.348 297.0 205000.0 25 0 32529.0 + 10285 FRMLHITLT 9 83 566.3221579520027 1130.6297629708054 2 566.3220092654228 MULTI CID FTMS 0 0 0 8529 190066.734375 0.3520989539270084 11 -0.657806396484375 7 Unmodified _FRMLHITLT_ REV__ENSG00000184979|ENST00000215794|USP18;REV__nc|ENSG00000184979|Q9UMW8-2|USP18 1.844237919475145 0.850302753031785 6 {I|L} 1 -1 2.4743 0.0 0.0 0.21884 0.0 0.0 583.3336336756867 431.19257532291255 1014.5262089985991 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.21884 + + 2 + 1 1.52 49905.6 1.0 2985 5549 8529 SUDHL4_400M_050219_2,8536 SUDHL4_400M_050219_2,8536,FRMLHITLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8537 46.355 439.0 103850.0 25 0 9933.7 45662 YVRRRLTAE 9 84 582.3344689235521 1162.654384913904 2 582.3346435427666 MULTI CID FTMS 0 0 0 8529 140832.21875 0.2947188428653726 10 -0.6280784606933594 8 Unmodified _YVRRRLTAE_ ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149|PLEC 2.302733041254933 0.8342969208511092 6 Y 1 8 11.594 0.0 0.0 0.99718 0.0 0.0 981.5808813512072 0.0 981.5808813512072 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 + Y 0.99718 + + 53 + 1 1.52 38787.0 1.0 2986 5549 8529 SUDHL4_400M_050219_2,8537 SUDHL4_400M_050219_2,8537,YVRRRLTAE False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8538 46.369 800.0 82236.0 25 0 6972.2 + 15145 INVIKATYKS 10 90 568.835298082878 1135.656043232556 2 568.8354369997978 MULTI CID FTMS 0 0 0 8529 140473.6875 0.6234521990896531 -2 0.0862655639648437 9 Unmodified _INVIKATYKS_ REV__ENSG00000188738|ENST00000424728|FSIP2;REV__nc|ENSG00000188738|Q5CZC0-2|FSIP2 3.2813086475875832 0.7114585191678878 6 {I|L} 1 -1 10.379 0.0 0.0 0.91389 0.0 0.0 1004.5607196014996 0.0 1004.5607196014996 0.0 10.37860356969059 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.91389 + + 7 + 1 1.52 55548.9 0.5799999833106995 2987 5549 8529 SUDHL4_400M_050219_2,8538 SUDHL4_400M_050219_2,8538,INVIKATYKS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8539 46.375 320.0 134520.0 25 0 17070.0 + 27007 PELIIQALS 9 81 492.29046047563264 982.5663680180652 2 492.2872802615166 MULTI CID FTMS 0 0 0 8529 137752.578125 1.0 0 0.0 10 Unmodified _PELIIQALS_ REV__ENSG00000104643|ENST00000221086|MTMR9;REV__ENST00000530200.1_1_8:11152806-11180294:+|nuORF;REV__nc|ENSG00000104643|Q96QG7-2|MTMR9 4.3292370932331545 0.7635526921153418 6 V 1 -1 10.181 0.0 0.0 1.0362 0.0 0.0 865.4871195212864 0.0 865.4871195212864 0.0 7.249235849265004 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.0362 - 12 + 1 1.52 38478.0 1.0 2988 5549 8529 SUDHL4_400M_050219_2,8539 SUDHL4_400M_050219_2,8539,PELIIQALS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8540 46.389 800.0 128790.0 25 0 23267.0 22793 LQSRRTLLAPQ 11 95 641.8822410645847 1281.7499291959691 2 641.8829833865166 MULTI CID FTMS 0 0 0 8529 101385.0625 0.6221710829429569 -2 0.0862655639648437 11 Unmodified _LQSRRTLLAPQ_ ENST00000373178.4_1_1:36559063-36559231:+|nuORF 2.735195868890462 0.8622431031272658 6 H 1 11 8.9258 0.0 0.0 0.69637 0.0 0.0 1126.6830937240927 0.0 1126.6830937240927 0.0 8.837136924959355 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.69637 - 13 + 1 1.52 84065.4 0.5 2989 5549 8529 SUDHL4_400M_050219_2,8540 SUDHL4_400M_050219_2,8540,LQSRRTLLAPQ False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8541 46.401 672.0 419810.0 25 0 41190.0 17041 KKQPAHLER 9 148 553.8266320351103 1105.6387111370204 2 553.8256713747978 MULTI CID FTMS 0 0 0 8529 87285.203125 0.1656871124280587 5 -0.3594703674316406 12 Unmodified _KKQPAHLER_ ENSG00000138686|ENST00000264499|BBS7;nc|ENSG00000138686|Q8IWZ6-2|BBS7 14.838274106304384 0.4350285940865338 6 DVVDAYRV 8 8 61.412 0.0 0.0 5.5545 0.0 0.0 170.16777084367374 0.0 170.16777084367374 0.0 46.08471912431624 0.0 0.0 0 0.0 0.0 1.5356668758921828 0.7742275032520141 DVVDAYRV 5.5545 - 3031 + 1 1.52 212230.8 1.0 2990 5549 8529 SUDHL4_400M_050219_2,8541 SUDHL4_400M_050219_2,8541,KKQPAHLER False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8542 46.416 800.0 107180.0 25 0 4966.2 -1 RMWRVRWRYCQ 11 87 848.9237178146012 1695.8328826960023 2 849.4265014529228 MULTI CID FTMS 0 0 0 8529 81458.09375 0.9834314268195178 -1 0.0569953918457031 13 Carbamidomethyl (C) _RMWRVRWRYC(Carbamidomethyl (C))Q_ ENSG00000184345|ENST00000333127|IQCF2 1.3295316138638542 0.8688751186870782 6 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ 9 -1 78.03 0.0 0.0 4.6013 0.0 0.0 0.0 713.3374727838499 713.3374727838499 54.759242529375655 0.0 0.0 0.0 0 1.5189301784845295 2.0 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}PN{I|L}NADQ 4.6013 - 768 + 1 1.52 63812.9 0.3199999928474426 2991 5549 8529 SUDHL4_400M_050219_2,8542 SUDHL4_400M_050219_2,8542,RMWRVRWRYCQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8543 46.43 800.0 208450.0 25 0 23525.0 + 20541 LLLSPASAYP 10 147 516.2900698882025 1030.565586843205 2 516.2905761599541 MULTI CID FTMS 0 0 0 8529 171868.328125 1.0 0 0.0 14 Unmodified _LLLSPASAYP_ REV__ENST00000314891.10_1_15:34651206-34652316:-|nuORF 30.63653989081413 0.2803493085145199 6 {I|L}{I|L}{I|L}S{[CP]|[EA]}WTV 9 -1 + 63.303 0.0 0.0 6.1426 6.1426 83.468 0.0 0.0 0.0 33.01304278636961 3.802112417116064 3.802112417116064 3.802112417116064 0 0.7614393726401688 1.6989700043360187 0.4876954943324545 0.0 {I|L}{I|L}{I|L}S{[CP]|[EA]}WTV;{I|L}{I|L}{I|L}S{[CP]|[EA]}WS{I|L};{I|L}{I|L}{I|L}S{[CP]|[EA]}{[ES]|[DT]|[{I|L}C]}AV;{I|L}{I|L}{I|L}S[Y{M(Oxidation (M))|F}]Y{I|L};{I|L}{I|L}{I|L}S{[CP]|[EA]}{[ES]|[DT]|[{I|L}C]}G{I|L};{I|L}{I|L}{I|L}S{[CP]|[EA]}{[ET]|[MV]}GV;{I|L}{I|L}{I|L}[C(Carbamidomethyl (C))D][W{I|L}]V;{I|L}{I|L}[PG]V{M(Oxidation (M))|F}WTV;{I|L}{I|L}{I|L}S[EP]{[NV]|[RG]}{M(Oxidation (M))|F};{I|L}{I|L}{I|L}[C(Carbamidomethyl (C))D]{[RE]|[WV]}{I|L} 6.1426;5.7737;5.5462;5.3004;5.1773;4.8202;4.5487;4.5119;4.3116;4.1797 -;-;-;-;-;-;-;-;-;- 992 + 1 1.52 134177.0 0.550000011920929 2992 5549 8529 SUDHL4_400M_050219_2,8543 SUDHL4_400M_050219_2,8543,LLLSPASAYP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8544 46.445 800.0 54183.0 25 0 2919.5 -1 0 74 774.030813539473 2319.070611218619 3 774.3643676638603 MULTI CID FTMS 0 0 0 8529 95946.296875 1.0 0 0.0 15 6 A{I|L} 2 -1 10.969 0.0 0.0 0.473 0.0 0.0 1747.8580254863648 384.06846033267817 2131.926485819043 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{I|L} 0.473 - 66 + 1 1.52 41557.7 0.3499999940395355 2993 5549 8529 SUDHL4_400M_050219_2,8544 SUDHL4_400M_050219_2,8544, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8546 46.45 72.0 754560.0 25 0 242540.0 + 8544 ETGLLLGPPL 10 73 505.3000461437287 1008.5855393542574 2 505.3001891970634 MULTI CID FTMS 0 0 0 8545 784976.25 0.5224824424363761 1 -0.0822486877441406 1 Unmodified _ETGLLLGPPL_ REV__ENST00000417456.1_1_1:35441975-35442986:-|nuORF 19.256988751693697 0.5244284437930726 6 {[CP]|[EA]}S{I|L}{I|L}{I|L} 6 -1 27.55 0.0 0.0 2.7316 0.0 0.0 0.0 379.19745276662 379.19745276662 -5.769145564673117 0.0 -5.769145564673117 0.0 0 0.0 0.0 1.5044321917401078 0.0 {[CP]|[EA]}S{I|L}{I|L}{I|L} 2.7316 - 314 1 1.52 45958.8 1.0 2994 5550 8545 SUDHL4_400M_050219_2,8546 SUDHL4_400M_050219_2,8546,ETGLLLGPPL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8547 46.455 239.0 111230.0 25 0 13037.0 + 29694 QPFLNVIKE 9 51 544.309802309944 1086.6050516866878 2 544.3092529177666 MULTI CID FTMS 0 0 0 8545 231355.21875 0.7405030910445577 1 -0.0822486877441406 2 Unmodified _QPFLNVIKE_ REV__ENSG00000144306|ENST00000272732|SCRN3;REV__ENST00000475928.1_1_2:175275226-175292620:+|nuORF;REV__nc|ENSG00000144306|Q0VDG4-2|SCRN3 1.844237919475145 0.850302753031785 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 29266.5 1.0 2995 5550 8545 SUDHL4_400M_050219_2,8547 SUDHL4_400M_050219_2,8547,QPFLNVIKE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8548 46.456 51.0 866140.0 25 0 87563.0 + 33125 KESTLHLVL 9 64 520.3108852294612 1038.6072175257225 2 520.3111450076103 MULTI CID FTMS 0 0 0 8545 1185542.5 1.0 0 0.0 3 Unmodified _SETLKHLVL_ ENSG00000143947|ENST00000272317|RPS27A;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENSG00000170315|ENST00000302182|UBB;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENSG00000221983|ENST00000442744|UBA52;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENSG00000150991|ENST00000339647|UBC;ENST00000392399.3_1_2:137087013-137087097:-|nuORF 12.240655878213236 0.5053430591993562 6 H{I|L}V{I|L} 4 5 36.938 0.0 0.0 3.5565 0.0 0.0 558.3012562482437 0.0 558.3012562482437 0.0 31.453650195120844 0.0 0.0 0 0.5 0.0 0.0 0.0 + H{I|L}V{I|L} 3.5565 + + 16 1 1.52 40435.0 1.0 2996 5550 8545 SUDHL4_400M_050219_2,8548 SUDHL4_400M_050219_2,8548,SETLKHLVL False False KESTLHLVL 46.456162 520.31114500761 3955327.0 8545.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC;;ENST00000392399.3_1_2:137087013-137087097:-|nuORF -0.0359878540039062 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8549 46.458 91.0 405520.0 25 0 48286.0 + 11671 GLDVDGIYRV 10 53 553.7956776251568 1105.5768023171136 2 553.7958862185478 MULTI CID FTMS 0 0 0 8545 640085.125 0.9575726442918682 -1 0.1229133605957031 4 Unmodified _GLDVDGIYRV_ ENSG00000075884|ENST00000295095|ARHGAP15;ENSG00000123329|ENST00000393791|ARHGAP9;ENST00000546704.1_1_12:57868176-57868820:-|nuORF;ENST00000549436.5_1_2:144276854-144461094:+|nuORF;nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;nc|ENSG00000123329|Q9BRR9-4|ARHGAP9;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;nc|ENSG00000123329|Q9BRR9|ARHGAP9 23.78978130925829 0.4341852049148378 6 {[VA]|[{I|L}G]}DVDVA 7 5 60.974 0.0 0.0 5.5151 0.0 0.0 0.0 433.22138391666255 433.22138391666255 39.802819856851386 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {[VA]|[{I|L}G]}DVDVA 5.5151 - 125 + 1 1.52 37050.9 1.0 2997 5550 8545 SUDHL4_400M_050219_2,8549 SUDHL4_400M_050219_2,8549,GLDVDGIYRV False True GLDVDGIYRV 46.458176 553.795886218548 8367392.5 8545.0 ENST00000549436.5_1_2:144276854-144461094:+|nuORF;;nc|ENSG00000123329|Q9BRR9-3|ARHGAP9;;nc|ENSG00000123329|Q9BRR9-5|ARHGAP9;;ENSG00000123329|ENST00000393791|ARHGAP9;;ENST00000546704.1_1_12:57868176-57868820:-|nuORF;;ENSG00000075884|ENST00000295095|ARHGAP15;;nc|ENSG00000123329|Q9BRR9|ARHGAP9;;nc|ENSG00000123329|Q9BRR9-4|ARHGAP9 6.606503168741862 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8550 46.461 121.0 570160.0 25 0 100900.0 + 18254 KVIDYVPGI 9 84 502.2947649812981 1002.5749770293962 2 502.2950012087822 MULTI CID FTMS 0 0 0 8545 477595.4375 0.8208880491626575 -1 0.1229133605957031 5 Unmodified _KVIDYVPGI_ ENSG00000163659|ENST00000295924|TIPARP 54.773552608820026 0.0299037012502309 6 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}VKV 6 7 34.94 0.0 0.0 3.485 0.0 0.0 0.0 282.14470828581767 282.14470828581767 18.90932827771976 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.7059771852360797 0.0 {[YD]|[{M(Oxidation (M))|F}M]}{I|L}VKV 3.485 - 197 1 1.52 59165.5 1.0 2998 5550 8545 SUDHL4_400M_050219_2,8550 SUDHL4_400M_050219_2,8550,KVIDYVPGI True True KVIDYVPGI 46.460666 502.295001208782 4266925.0 8545.0 ENSG00000163659|ENST00000295924|TIPARP 5.648893515268962 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8551 46.471 597.0 207160.0 25 0 22508.0 + 18636 LAGFLHSI 8 108 429.24817330832377 0 429.2481262087822 PEAK CID FTMS 0 0 0 8545 140237.25 1.0 0 0.0 6 Unmodified _LAGFLHSI_ ENSG00000176555|ENST00000319988|OR4S1 34.18733598223924 0.1926487934498573 6 VT 2 8 11.454 0.0 0.0 1.3373 0.0 0.0 202.1331741539538 451.21053727758647 653.3437114315402 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 VT 1.3373 - 93 + 1 1.52 98687.1 1.0 2999 5550 8545 SUDHL4_400M_050219_2,8551 SUDHL4_400M_050219_2,8551,LAGFLHSI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8552 46.485 800.0 125690.0 25 0 16933.0 + 34329 SLSEKQYFL 9 119 557.7923448424456 0 557.7926513552666 PEAK CID FTMS 0 0 0 8545 113156.5546875 1.0 0 0.0 7 Unmodified _SLSEKQYFL_ ENSG00000106608|ENST00000453200|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP 63.960520009940105 0.0127941097601138 6 {M(Oxidation (M))|F}YQGSD 6 8 43.849 0.0 0.0 3.9377 0.0 0.0 331.20795706971427 82.06701074771718 413.27496781743145 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.6861818737241735 0.7302046884880937 {M(Oxidation (M))|F}YQGSD 3.9377 - 918 + 1 1.52 80790.1 0.5099999904632568 3000 5550 8545 SUDHL4_400M_050219_2,8552 SUDHL4_400M_050219_2,8552,SLSEKQYFL True True SLSEKQYFL 46.484924 557.792651355267 241531.515625 8545.0 nc|ENSG00000106608|Q8TCY9-2|URGCP;;nc|ENSG00000106608|Q8TCY9-3|URGCP;;ENSG00000106608|ENST00000453200|URGCP;;nc|ENSG00000106608|Q8TCY9-4|URGCP 5.602296193440755 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8553 46.496 663.0 165140.0 25 0 14836.0 + 3199 AVWKESFQV 9 133 547.2867232324132 1092.5588935316264 2 547.2870361208916 MULTI CID FTMS 0 0 0 8545 98354.25 1.0 0 0.0 8 Unmodified _AVWKESFQV_ ENSG00000181544|ENST00000650831|FANCB 53.832793166522166 0.0319663582346103 6 {[VA]|[{I|L}G]}GESS{M(Oxidation (M))|F}Q[R{I|L}] 10 5 + 47.84 0.0 0.0 4.3787 4.3787 73.0 0.0 0.0 0.0 5.1709779556855295 7.159394387005577 5.1709779556855295 0.5115252244738144 0 0.7742275032520141 2.0 0.2742275032520141 0.3252574989159953 {[VA]|[{I|L}G]}GESS{M(Oxidation (M))|F}Q[R{I|L}];{[VA]|[{I|L}G]}WSS{M(Oxidation (M))|F}Q[R{I|L}];[WK]ES{M(Oxidation (M))|F}Q[R{I|L}];{[VA]|[{I|L}G]}{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}T[NS]QV;{[VA]|[{I|L}G]}G[YT]WQ[R{I|L}];{[VA]|[{I|L}G]}GESS{M(Oxidation (M))|F}{[VA]|[{I|L}G]}QV;{[VA]|[{I|L}G]}GV{M(Oxidation (M))|F}G{M(Oxidation (M))|F}Q[R{I|L}];{[VA]|[{I|L}G]}{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}T[HK]Y;{[VA]|[{I|L}G]}WSS{M(Oxidation (M))|F}{[VA]|[{I|L}G]}QV;{[VA]|[{I|L}G]}{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}T[NS]N{I|L} 4.3787;4.3319;3.9054;3.7234;3.691;3.5182;3.4924;3.4888;3.4674;3.4479 -;-;-;-;-;-;-;-;-;- 2131 1 1.52 91629.5 1.0 3001 5550 8545 SUDHL4_400M_050219_2,8553 SUDHL4_400M_050219_2,8553,AVWKESFQV True True AVWKESFQV 46.496472 547.287036120892 1036036.0625 8545.0 ENSG00000181544|ENST00000650831|FANCB 5.338033358256022 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8554 46.506 536.0 95038.0 25 0 18694.0 + 33430 SIAEVVHQL 9 83 498.2791931033134 0 498.2791931033134 PEAK CID FTMS 0 0 0 -1 0 9 Unmodified _SIAEVVHQL_ ENSG00000178950|ENST00000314167|GAK;ENST00000504435.1_1_4:882633-887812:-|nuORF;nc|ENSG00000178950|O14976-2|GAK 22.736283301280096 0.1762661025464585 6 VVHSS 5 6 17.836 0.0 0.0 1.7934 0.0 0.0 400.1937016584 82.06693445377186 482.2606361121719 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.0 VVHSS 1.7934 - 77 + 1 1.52 43224.3 1.0 3002 5550 8545 SUDHL4_400M_050219_2,8554 SUDHL4_400M_050219_2,8554,SIAEVVHQL False True SIAEVVHQL 46.505885 498.279193103313 234663.859375 8545.0 ENSG00000178950|ENST00000314167|GAK;;nc|ENSG00000178950|O14976-2|GAK;;ENST00000504435.1_1_4:882633-887812:-|nuORF 3.8519771099090576 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8555 46.519 770.0 72518.0 25 0 8079.4 + 32227 RVYPQAVYF 9 72 571.8033325076103 0 571.8033325076103 PEAK CID FTMS 0 0 0 -1 0 10 Unmodified _RVYPQAVYF_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 20.453626601364224 0.1969592619112565 6 YVA 3 7 23.188 0.0 0.0 2.0312 0.0 0.0 165.0773472802976 640.3222376231253 805.3995849034229 0.0 0.0 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 YVA 2.0312 - 43 + 1 1.52 47990.2 1.0 3003 5550 8545 SUDHL4_400M_050219_2,8555 SUDHL4_400M_050219_2,8555,RVYPQAVYF False True RVYPQAVYF 46.51922 571.80333250761 617247.125 8545.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 6.092590808868408 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8556 46.526 279.0 294810.0 25 0 26723.0 + -1 GMYPNLVHV 9 102 523.2597429122246 1044.5049328912492 2 523.2595703005791 MULTI CID FTMS 0 0 0 8545 206741.703125 0.6686052381501489 -2 0.1799087524414062 11 Oxidation (M) _GM(Oxidation (M))YPNLVHV_ ENSG00000047188|ENST00000161863|YTHDC2 30.22481116460888 0.1466181017706357 6 {[CT]|[{M(Oxidation (M))|F}G]}YPN{I|L}V[HV] 9 -1 + 36.577 0.0 0.0 3.5018 3.5018 81.017 0.0 0.0 0.0 14.181212380090225 7.147642715192511 7.147642715192511 9.208187539523756 0 0.8494850021680094 0.0 0.0 0.0 {[CT]|[{M(Oxidation (M))|F}G]}YPN{I|L}V[HV];{[CT]|[{M(Oxidation (M))|F}G]}YPGG{I|L}V[HV];[NP]{I|L}[KQ]PY{[DA]|[EG]};[NP]{I|L}VHY[R{M(Oxidation (M))|F}];[NP]{I|L}VYH[R{M(Oxidation (M))|F}];[PA][KG]{I|L}NPY{[DA]|[EG]};{[CT]|[{M(Oxidation (M))|F}G]}V[{I|L}A]VH[R{M(Oxidation (M))|F}];[NP]{I|L}YVH[R{M(Oxidation (M))|F}];[PA][VG][KQ]PY{[DA]|[EG]};[PA][VG]VHY[R{M(Oxidation (M))|F}] 3.5018;2.6203;2.219;1.8357;1.5475;1.4675;1.2798;1.0907;0.99369;0.60519 +;-;-;-;-;-;-;-;-;- + 214 + 1 1.52 67107.2 1.0 3004 5550 8545 SUDHL4_400M_050219_2,8556 SUDHL4_400M_050219_2,8556,GMYPNLVHV False False GMYPNLVHV 46.525541 523.259570300579 480071.59375 8545.0 ENSG00000047188|ENST00000161863|YTHDC2 9.985813935597738 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8557 46.528 100.0 497330.0 25 0 42000.0 + 10588 FVIRNIVEA 9 68 530.811178839628 1059.607804746056 2 531.3151122927666 MULTI CID FTMS 0 0 0 8545 179590.25 0.2515541992773552 -2 0.1799087524414062 12 Unmodified _FVIRNIVEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 42.09456458481378 0.0639583784996157 6 N{I|L}V{[CP]|[EA]} 5 4 20.049 0.0 0.0 1.8922 0.0 0.0 515.3213978498062 0.0 515.3213978498062 0.0 6.9504625720438895 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.3494850021680094 + N{I|L}V{[CP]|[EA]} 1.8922 + + 39 1 1.52 46096.3 1.0 3005 5550 8545 SUDHL4_400M_050219_2,8557 SUDHL4_400M_050219_2,8557,FVIRNIVEA True False FVIRNIVEA 46.527701 531.315112292767 12844651.0 8545.0 ENST00000465478.1_1_8:93156318-93156576:-|nuORF;;ENSG00000197728|ENST00000646449|RPS26;;nc|ENSG00000196933|Q5JNZ5|RPS26P11;;ENST00000447425.1_1_7:22813267-22813561:-|nuORF 5.787974039713542 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8559 46.533 191.0 301830.0 25 0 68492.0 29170 QFVLTLSELK 10 70 589.3430741013665 1176.6715952695329 2 589.3432494997978 MULTI CID FTMS 0 0 0 8558 473389.15625 0.308792138633495 10 -0.4877510070800781 1 Unmodified _QFVLTLSELK_ ENSG00000058600|ENST00000299853|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-4|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E 1.3295316138638542 0.7204866299213272 6 R 1 10 0.9691 0.0 0.0 0.082359 0.0 0.0 938.5289388748048 79.01990686588124 1017.548845740686 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.082359 - 1 + 1 1.52 50034.9 1.0 3006 5551 8558 SUDHL4_400M_050219_2,8559 SUDHL4_400M_050219_2,8559,QFVLTLSELK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8560 46.537 175.0 301190.0 25 0 68180.0 + 29168 QFVFRTRRR 9 55 633.3690769768929 1264.7236010205856 2 633.3696777224541 MULTI CID FTMS 0 0 0 8558 565675.875 1.0 0 0.0 2 Unmodified _QFVFRTRRR_ REV__ENSG00000172732|ENST00000308110|MUS81 0.5247636613948944 0.8963649302248013 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.52 50565.6 1.0 3007 5551 8558 SUDHL4_400M_050219_2,8560 SUDHL4_400M_050219_2,8560,QFVFRTRRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8561 46.538 46.0 1065500.0 25 0 303650.0 20270 LLDRCGVF 8 63 461.7448941171408 921.4752353010816 2 461.7448303103447 MULTI CID FTMS 0 0 0 8558 1549431.125 0.6569370195378024 -1 0.0822486877441406 3 Unmodified _LLDRCGVF_ ENSG00000175215|ENST00000398073|CTDSP2 5.760428011301431 0.7893668129297577 6 {I|L}{I|L}D 3 5 27.447 0.0 0.0 2.9786 0.0 0.0 0.0 577.2558498853191 577.2558498853191 16.338031200885155 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {I|L}{I|L}D 2.9786 + + 16 1 1.52 46183.5 1.0 3008 5551 8558 SUDHL4_400M_050219_2,8561 SUDHL4_400M_050219_2,8561,LLDRCGVF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8562 46.539 38.0 1079200.0 25 0 181830.0 + -1 LLLVCCCI 8 58 468.7393642088624 935.4641754845248 2 468.7391235232353 MULTI CID FTMS 0 0 0 8558 1487252.125 0.2971954610139961 -2 0.2051620483398437 4 Carbamidomethyl (C) _LLLVC(Carbamidomethyl (C))CCI_ REV__ENST00000323853.9_1_2:96962401-96962708:-|nuORF 17.086550045450526 0.6584923310065985 6 {I|L}{I|L} 2 -1 41.766 0.0 0.0 4.4647 0.0 0.0 0.0 706.2754773170201 706.2754773170201 19.089934634871284 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L} 4.4647 + + 19 + 1 1.52 36840.1 1.0 3009 5551 8558 SUDHL4_400M_050219_2,8562 SUDHL4_400M_050219_2,8562,LLLVCCCI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8563 46.541 79.0 530920.0 25 0 59243.0 + 20291 LLDVPTAAV 9 82 449.76586557927385 897.5171782253477 2 449.7658264040947 MULTI CID FTMS 0 0 0 8558 812376.4375 0.5732033845311211 -2 0.2051620483398437 5 Unmodified _LLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 30.22481116460888 0.1466181017706357 6 [TP]AA[RN][R{I|L}] 8 8 + 30.194 0.0 0.0 3.3642 3.3642 84.088 0.0 0.0 0.0 0.5014445271442725 -2.2505471016818746 -2.2505471016818746 30.194182131708303 0 0.0 0.8538719643217619 1.1989700043360187 0.0 [TP]AA[RN][R{I|L}] 3.3642 - 97 1 1.52 36900.7 1.0 3010 5551 8558 SUDHL4_400M_050219_2,8563 SUDHL4_400M_050219_2,8563,LLDVPTAAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8564 46.543 91.0 510340.0 25 0 119090.0 17487 KPGERKKT 8 51 472.2879662384327 942.5613795436656 2 472.2879821658134 MULTI CID FTMS 0 0 0 8558 691728.6875 0.2543366095692341 -4 0.2914276123046875 6 Unmodified _KPGERKKT_ ENSG00000179603|ENST00000339582|GRM8;ENST00000341617.7_1_7:126079175-126341814:-|nuORF;nc|ENSG00000179603|O00222-2|GRM8 2.059750862983233 0.8118298629782807 6 P 1 7 0.088644 0.0 0.0 0.0094046 0.0 0.0 722.4295263715936 120.05120264224844 842.480729013842 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.0094046 + + 2 + 1 1.52 43393.1 1.0 3011 5551 8558 SUDHL4_400M_050219_2,8564 SUDHL4_400M_050219_2,8564,KPGERKKT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8565 46.545 78.0 478670.0 25 0 112150.0 -1 RLCTECGL 8 63 476.2226744943585 950.430796055517 2 476.2217895388603 MULTI CID FTMS 0 0 0 8558 618692.0625 0.5982851180167469 -2 0.2051620483398437 7 Carbamidomethyl (C) _RLC(Carbamidomethyl (C))TECGL_ ENSG00000061492|ENST00000506684|WNT8A;nc|ENSG00000061492|Q9H1J5-2|WNT8A;nc|ENSG00000061492|Q9H1J5|WNT8A 5.760428011301431 0.7893668129297577 6 {I|L}{I|L}D 3 -1 25.942 0.0 0.0 2.7295 0.0 0.0 0.0 606.2118073682701 606.2118073682701 15.104669534178212 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}D 2.7295 - 14 1 1.52 34664.9 1.0 3012 5551 8558 SUDHL4_400M_050219_2,8565 SUDHL4_400M_050219_2,8565,RLCTECGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8566 46.551 353.0 211430.0 25 0 26610.0 + 185 AANPHSFVF 9 106 495.2455348655546 0 495.2454711794853 PEAK CID FTMS 0 0 0 8558 310118.0 1.0 0 0.0 8 Unmodified _AANPHSFVF_ ENSG00000130810|ENST00000253107|PPAN;nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN 56.17704186161178 0.0208571546621878 6 V{M(Oxidation (M))|F}SN 4 8 20.522 0.0 0.0 2.0761 0.0 0.0 165.07540703404044 373.1599215143188 538.2353285483592 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.8807196863200843 0.0 V{M(Oxidation (M))|F}SN 2.0761 - 399 + 1 1.52 63544.6 1.0 3013 5551 8558 SUDHL4_400M_050219_2,8566 SUDHL4_400M_050219_2,8566,AANPHSFVF True True AANPHSFVF 46.551016 495.245471179485 1072577.125 8558.0 nc|ENSG00000130810|Q9NQ55-2|PPAN;;nc|ENSG00000130810|Q9NQ55-3|PPAN;;ENSG00000130810|ENST00000253107|PPAN 8.672574361165365 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8567 46.558 376.0 354050.0 25 0 71069.0 14611 IIFWVIAV 8 104 480.8011525693061 959.5877522054122 2 480.8012573122978 MULTI CID FTMS 0 0 0 8558 286294.875 0.2027626641954155 -4 0.2914276123046875 9 Unmodified _IIFWVIAV_ ENSG00000184185|ENST00000583088|KCNJ12 11.114462752807354 0.7467182956244686 6 {I|L}{I|L}D 3 6 20.458 0.0 0.0 2.1319 0.0 0.0 0.0 615.3674207447278 615.3674207447278 8.46787486224656 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}D 2.1319 - 15 1 1.52 107156.8 1.0 3014 5551 8558 SUDHL4_400M_050219_2,8567 SUDHL4_400M_050219_2,8567,IIFWVIAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8568 46.572 800.0 372570.0 25 0 47403.0 + 31683 RRLGQDPLVAP 11 136 611.3559653671452 1220.6973778010904 2 611.3565551638603 MULTI CID FTMS 0 0 0 8558 204810.890625 0.1729865907680496 -4 0.2914276123046875 10 Unmodified _RRLGQDPLVAP_ REV__ENST00000485559.1_1_22:46749554-46749875:+|nuORF 8.745405648335112 0.8338865417133445 6 D 1 -1 10.995 0.0 0.0 0.9007 0.0 0.0 610.375134849485 492.2858675592407 1102.6610024087256 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 D 0.9007 + + 45 + 1 1.52 218353.5 0.8999999761581421 3015 5551 8558 SUDHL4_400M_050219_2,8568 SUDHL4_400M_050219_2,8568,RRLGQDPLVAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8569 46.577 306.0 122880.0 25 0 28874.0 + 6493 EAIKMMKRL 9 65 560.3224741387844 1118.6303953443687 2 560.3208495974541 MULTI CID FTMS 0 0 0 8558 194479.625 0.797457504734439 2 -0.1150283813476562 11 Unmodified _EAIKMMKRL_ REV__ENSG00000122218|ENST00000241704|COPA;REV__nc|ENSG00000122218|P53621-2|COPA 2.059750862983233 0.8427793054688888 6 {M(Oxidation (M))|F}Y 2 -1 10.969 0.0 0.0 0.98058 0.0 0.0 330.3198007172187 475.1590670221313 805.47886773935 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}Y 0.98058 - 13 + 1 1.52 32980.9 1.0 3016 5551 8558 SUDHL4_400M_050219_2,8569 SUDHL4_400M_050219_2,8569,EAIKMMKRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8570 46.591 800.0 73590.0 25 0 6257.7 -1 0 71 1093.3784072649846 2184.7422615967694 2 1093.878710925579 MULTI CID FTMS 0 0 0 8558 95238.0390625 0.8532778362434541 -1 0.0822486877441406 12 6 VM{M(Oxidation (M))|F}{I|L} 4 -1 13.443 0.0 0.0 0.61533 0.0 0.0 1110.2025593118606 581.2569674127561 1691.4595267246168 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 VM{M(Oxidation (M))|F}{I|L} 0.61533 - 50 + 1 1.52 45639.9 0.6100000143051147 3017 5551 8558 SUDHL4_400M_050219_2,8570 SUDHL4_400M_050219_2,8570, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8572 46.595 28.0 1116200.0 25 0 197950.0 + 40814 KVGPVPVLV 9 44 454.3024725070714 906.5903920809428 2 454.3024474978447 MULTI CID FTMS 0 0 0 8571 2275784.5 0.5637993417589183 1 -0.0517349243164062 1 Unmodified _VLLTHLLV_ ENSG00000106803|ENST00000223641|SEC61B 15.768221252438446 0.6779680726941459 6 [VP]K[VG]PV{I|L}V 9 6 + 46.545 0.0 0.0 5.1341 5.1341 90.039 0.0 0.0 0.0 12.331655954731248 31.06037787529949 12.331655954731248 46.544927940339775 0 0.8182503180159344 1.6989700043360187 0.0 0.0 [VP]K[VG]PV{I|L}V 5.1341 - 61 1 1.496 32742.1 1.0 3018 5552 8571 SUDHL4_400M_050219_2,8572 SUDHL4_400M_050219_2,8572,VLLTHLLV False False KVGPVPVLV 46.595138 454.302447497845 66595632.0 8571.0 ENSG00000106803|ENST00000223641|SEC61B 4.844306230545044 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8573 46.608 764.0 111740.0 25 0 20871.0 + 40571 VKLEKKMRY 9 106 597.8561903970555 1193.6978278609108 2 597.8561279177666 MULTI CID FTMS 0 0 0 8571 179858.390625 0.2802670330537221 11 -0.5105705261230469 2 Unmodified _VKLEKKMRY_ REV__ENSG00000124256|ENST00000371173|ZBP1;REV__ENST00000432548.2_1_20:56190212-56195528:-|nuORF;REV__ENST00000461547.5_1_20:56191111-56191654:-|nuORF;REV__ENST00000480037.1_1_20:56191111-56195351:-|nuORF;REV__nc|ENSG00000124256|Q9H171-2|ZBP1;REV__nc|ENSG00000124256|Q9H171-3|ZBP1;REV__nc|ENSG00000124256|Q9H171-4|ZBP1;REV__nc|ENSG00000124256|Q9H171-5|ZBP1;REV__nc|ENSG00000124256|Q9H171-6|ZBP1 2.059750862983233 0.8427793054688888 6 {M(Oxidation (M))|F} 1 -1 9.6041 0.0 0.0 0.80457 0.0 0.0 1028.6491350892295 0.0 1028.6491350892295 0.0 0.5133117094857376 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.80457 + + 18 + 1 1.496 67004.3 1.0 3019 5552 8571 SUDHL4_400M_050219_2,8573 SUDHL4_400M_050219_2,8573,VKLEKKMRY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8574 46.62 645.0 171320.0 25 0 31940.0 + 20332 LLFFFRLSPV 10 97 619.8688924532786 0 619.8699218630791 PEAK CID FTMS 0 0 0 8571 241666.953125 0.6197202303048603 -1 0.06329345703125 3 Unmodified _LLFFFRLSPV_ REV__ENST00000307849.7_1_2:192542971-192543043:+|nuORF 1.6526216038709556 0.3961065659209837 6 P 1 -1 5.4846 0.0 0.0 0.44312 0.0 0.0 618.4363800219884 519.2212618463499 1137.6576418683385 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.44312 + + 2 + 1 1.496 84454.3 1.0 3020 5552 8571 SUDHL4_400M_050219_2,8574 SUDHL4_400M_050219_2,8574,LLFFFRLSPV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8575 46.631 645.0 267460.0 25 0 39122.0 41758 VPVAAPLG 8 179 362.2221553303906 722.4297577275812 2 362.2220336794853 MULTI CID FTMS 0 0 0 8571 248725.78125 1.0 0 0.0 4 Unmodified _VPVAAPLG_ ENSG00000182768|ENST00000379095|NGRN;ENST00000561573.1_1_15:90806992-90815017:+|nuORF;REV__ENSG00000221829|ENST00000378643|FANCG 0.7936320650641473 0.8195151834710337 6 G 1 7 15.485 0.0 0.0 2.1434 0.0 0.0 647.3967357322672 0.0 647.3967357322672 0.0 10.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + G 2.1434 + + 10 + 1 1.496 135292.2 1.0 3021 5552 8571 SUDHL4_400M_050219_2,8575 SUDHL4_400M_050219_2,8575,VPVAAPLG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8576 46.643 683.0 271390.0 25 0 41816.0 + 37912 TLWYRAPEV 9 136 567.7999299796566 1133.585307026113 2 567.8002197146416 MULTI CID FTMS 0 0 0 8571 205587.171875 0.6192440650819134 -1 0.06329345703125 5 Unmodified _TLWYRAPEV_ ENSG00000105810|ENST00000424848|CDK6;ENSG00000135446|ENST00000257904|CDK4;ENST00000473078.1_1_7:92300738-92355023:-|nuORF;nc|ENSG00000135446|P11802-2|CDK4 48.07275321834293 0.0445955024081691 6 [{I|L}T]EARYWPV 9 5 + 86.52 0.0 0.0 7.6325 7.6325 84.98 0.0 0.0 0.0 3.450980400142569 3.450980400142569 3.450980400142569 2.04628427264403 0 1.1549471895720984 2.0 0.6109243748081782 0.4247425010840047 [{I|L}T]EARYWPV;[{I|L}T]EARYGEPV;[{I|L}T]WYRAEPV;[{I|L}T]EGYRAEPV;[{I|L}T]EA[VG]YWPV;[{I|L}T]WY[VG]AEPV;[{I|L}T]WYRA[DP]{I|L};[{I|L}T]EGYRA[DP]{I|L};[{I|L}T]W{[VA]|[{I|L}G]}YGEPV;[{I|L}T][YQ][{I|L}T]AEPV 7.6325;7.4519;7.328;7.1475;6.4455;6.141;5.522;5.3415;5.3017;5.1722 -;-;-;-;-;-;-;-;-;- 1812 1 1.496 139994.5 1.0 3022 5552 8571 SUDHL4_400M_050219_2,8576 SUDHL4_400M_050219_2,8576,TLWYRAPEV True True TLWYRAPEV 46.642755 567.800219714642 1916341.0 8571.0 ENST00000473078.1_1_7:92300738-92355023:-|nuORF;;ENSG00000105810|ENST00000424848|CDK6;;ENSG00000135446|ENST00000257904|CDK4;;nc|ENSG00000135446|P11802-2|CDK4 5.750174283981323 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8578 46.655 566.0 307530.0 25 0 55614.0 -1 0 87 917.4976841226928 1832.980815312185 2 918.0005981326104 MULTI CID FTMS 0 0 0 8577 169887.875 1.0 0 0.0 1 6 [TP]AAV[RN]AV 9 -1 48.944 0.0 0.0 2.6702 0.0 0.0 0.0 950.4486857557978 950.4486857557978 39.90295303156586 0.0 0.0 0.0 0 0.0 1.0 1.7544321917401078 0.0 [TP]AAV[RN]AV 2.6702 - 1318 1 1.496 119210.4 1.0 3023 5553 8577 SUDHL4_400M_050219_2,8578 SUDHL4_400M_050219_2,8578, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8579 46.663 488.0 125730.0 25 0 40920.0 + -1 LVPIVKVKM 9 70 521.8405076471743 1041.6664623611484 2 521.8406249880791 MULTI CID FTMS 0 0 0 8577 227276.375 0.752653255359833 1 -0.0392799377441406 2 Oxidation (M) _LVPIVKVKM(Oxidation (M))_ REV__ENSG00000103253|ENST00000389703|HAGHL;REV__ENST00000561750.1_1_16:777422-778482:+|nuORF;REV__ENST00000567696.1_1_16:777422-777680:+|nuORF;REV__ENST00000569143.1_1_16:777422-777998:+|nuORF;REV__nc|ENSG00000103253|Q6PII5-3|HAGHL;REV__nc|ENSG00000103253|Q6PII5-4|HAGHL;REV__nc|ENSG00000103253|Q6PII5|HAGHL 2.059750862983233 0.8427793054688888 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.496 51401.8 1.0 3024 5553 8577 SUDHL4_400M_050219_2,8579 SUDHL4_400M_050219_2,8579,LVPIVKVKM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8580 46.673 534.0 109280.0 25 0 14734.0 + 14857 ILGSNREKI 9 97 515.3046752810478 0 515.3046752810478 PEAK CID FTMS 0 0 0 -1 0 3 Unmodified _ILGSNREKI_ REV__ENSG00000214960|ENST00000407010|CRPPA;REV__nc|ENSG00000214960|A4D126-2|CRPPA 21.74664581756881 0.185237546287679 6 {I|L}G{I|L}NS{I|L} 6 -1 29.373 0.0 0.0 2.8557 0.0 0.0 261.14150280643304 167.08335291080314 428.2248557172362 0.0 0.0 0.0 0.0 0 0.5 0.0 0.2742275032520141 0.0 {I|L}G{I|L}NS{I|L} 2.8557 - 127 + 1 1.496 48653.5 1.0 3025 5553 8577 SUDHL4_400M_050219_2,8580 SUDHL4_400M_050219_2,8580,ILGSNREKI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8581 46.682 541.0 117030.0 25 0 17433.0 37566 TLIHRKLP 8 87 489.3146240115166 0 489.3146240115166 PEAK CID FTMS 0 0 0 -1 0 4 Unmodified _TLIHRKLP_ ENSG00000169964|ENST00000302392|TMEM42;ENST00000477126.1_1_3:44905682-44906669:+|nuORF 2.889219685676258 0.5898224805723975 6 E 1 8 0.9691 0.0 0.0 0.099231 0.0 0.0 748.4663471667849 96.08273492984608 844.549082096631 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.099231 - 4 + 1 1.496 56635.7 1.0 3026 5553 8577 SUDHL4_400M_050219_2,8581 SUDHL4_400M_050219_2,8581,TLIHRKLP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8584 46.696 326.0 212830.0 25 0 35116.0 + -1 VLCRLVCLSI 10 77 588.334966526466 1174.655380119732 2 588.3359863162041 MULTI CID FTMS 0 0 0 8583 391473.53125 1.0 0 0.0 1 Carbamidomethyl (C) _VLC(Carbamidomethyl (C))RLVCLSI_ REV__ENST00000447069.5_3_2:201677557-201677948:+|nuORF 3.944395688203298 0.708391353636983 6 K 1 -1 0.48455 0.0 0.0 0.04125 0.0 0.0 892.4866808048918 151.0519198053344 1043.5386006102262 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.04125 - 20 + 1 1.51 57090.3 1.0 3027 5555 8583 SUDHL4_400M_050219_2,8584 SUDHL4_400M_050219_2,8584,VLCRLVCLSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8585 46.703 387.0 127730.0 25 0 27370.0 + 15044 ILVYFWKLID 10 58 655.3819204895708 1308.7492880459415 2 655.3823730349541 MULTI CID FTMS 0 0 0 8583 214673.953125 0.5215572769803345 -11 0.5534706115722656 2 Unmodified _ILVYFWKLID_ REV__ENST00000522522.5_1_1:243375035-243388582:-|nuORF 1.844237919475145 0.7181058121064529 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.51 51242.8 1.0 3028 5555 8583 SUDHL4_400M_050219_2,8585 SUDHL4_400M_050219_2,8585,ILVYFWKLID False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8587 46.714 399.0 85254.0 25 0 10123.0 + -1 GACIALLAKKY 11 63 604.3480719154178 1206.6815908976355 2 604.3483764529228 MULTI CID FTMS 0 0 0 8586 408156.25 0.9722118321626372 -1 0.0172309875488281 1 Carbamidomethyl (C) _GAC(Carbamidomethyl (C))IALLAKKY_ REV__ENSG00000109511|ENST00000359299|ANXA10;REV__ENST00000507278.5_1_4:169086345-169108582:+|nuORF 1.3295316138638542 0.8688751186870782 6 E 1 -1 6.9897 0.0 0.0 0.57925 0.0 0.0 640.3856447079855 434.2342928522094 1074.619937560195 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.57925 - 1 + 1 1.51 28209.6 1.0 3029 5556 8586 SUDHL4_400M_050219_2,8587 SUDHL4_400M_050219_2,8587,GACIALLAKKY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8588 46.723 491.0 279360.0 25 0 38536.0 -1 0 74 734.3741860903973 733.3669096237973 1 734.3737670779228 MULTI CID FTMS 0 0 0 8586 239317.328125 0.5168697050271011 -1 0.0172309875488281 2 6 [{M(Oxidation (M))|F}E]V{I|L}QV 6 -1 + 67.51 0.0 0.0 9.2055 9.2055 96.037 0.0 0.0 0.0 11.786662482156345 15.836134377877327 11.786662482156345 11.786662482156345 0 1.0994850021680094 0.0 1.7302046884880935 0.3807196863200844 [{M(Oxidation (M))|F}E]V{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}QV;[{M(Oxidation (M))|F}E]VQ{I|L}V;[{M(Oxidation (M))|F}E]V{I|L}[AG]V;[{M(Oxidation (M))|F}E]V{I|L}VQ;[DP]Y{I|L}QV;[{M(Oxidation (M))|F}V]E{I|L}QV;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{I|L}[AG]V;{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}Q{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}{M(Oxidation (M))|F}QV 9.2055;7.5983;7.4975;7.4019;7.0461;6.9417;6.7713;6.3138;5.8903;5.7894 -;-;-;-;-;-;-;-;-;- 459 1 1.51 104733.7 1.0 3030 5556 8586 SUDHL4_400M_050219_2,8588 SUDHL4_400M_050219_2,8588, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8589 46.733 562.0 147530.0 25 0 10909.0 -1 0 83 987.12996599531 2958.368068586129 3 987.4680053591728 MULTI CID FTMS 0 0 0 8586 235038.15625 0.7199597002888465 -2 0.0208320617675781 3 6 SW{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4 -1 13.188 0.0 0.0 0.44577 0.0 0.0 2407.1770965135456 0.0 2407.1770965135456 0.0 3.125918950875501 0.0 0.0 0 0.0 0.0 0.0 0.0 SW{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 0.44577 - 172 1 1.51 65298.0 1.0 3031 5556 8586 SUDHL4_400M_050219_2,8589 SUDHL4_400M_050219_2,8589, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8590 46.742 491.0 214200.0 25 0 19385.0 + 17255 KLNDLIQRL 9 95 556.8429422142044 1111.6713314952087 2 556.8431884646416 MULTI CID FTMS 0 0 0 8586 206975.109375 0.5657999193740667 -1 0.0172309875488281 4 Unmodified _KLNDLIQRL_ ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA 80.6760300276096 0.0173529540220427 6 K{I|L}ND{I|L}{I|L}QR{I|L} 9 0 + 103.01 0.0 0.0 9.2665 9.2665 91.713 0.0 0.0 0.0 82.56730452591081 7.078122310649306 7.078122310649306 7.257724967479845 0 2.8494850021680094 0.8239087409443188 0.3807196863200844 0.7302046884880937 + + K{I|L}ND{I|L}{I|L}QR{I|L};{I|L}KND{I|L}{I|L}QR{I|L};K{I|L}N{I|L}D{I|L}QR{I|L};K{I|L}GGD{I|L}{I|L}QR{I|L};K{I|L}ND{I|L}{I|L}[AG]R{I|L};{I|L}KN{I|L}D{I|L}QR{I|L};K{I|L}{I|L}ND{I|L}QR{I|L};{I|L}KND{I|L}{I|L}[AG]R{I|L};{I|L}KGGD{I|L}{I|L}QR{I|L};K{I|L}GG{I|L}D{I|L}QR{I|L} 9.2665;8.6136;8.5459;8.4381;8.4381;7.893;7.8253;7.7853;7.7853;7.7176 +;-;-;-;-;-;-;-;-;- + 580 + 1 1.51 84330.0 1.0 3032 5556 8586 SUDHL4_400M_050219_2,8590 SUDHL4_400M_050219_2,8590,KLNDLIQRL True True KLNDLIQRL 46.741714 556.843188464642 1395490.25 8586.0 ENSG00000122218|ENST00000241704|COPA;;nc|ENSG00000122218|P53621-2|COPA 5.82388162612915 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8591 46.752 600.0 105180.0 25 0 34864.0 -1 0 55 943.566226855609 0 943.5653564333916 PEAK CID FTMS 0 0 0 8586 141008.625 0.7724733496304056 3 -0.2477760314941406 5 6 Y 1 -1 3.0989 0.0 0.0 0.16439 0.0 0.0 786.6006411118054 932.455209600256 1719.0558507120616 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.16439 - 1 + 1 1.51 49987.1 1.0 3033 5556 8586 SUDHL4_400M_050219_2,8591 SUDHL4_400M_050219_2,8591, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8592 46.763 634.0 30547.0 25 0 1165.2 -1 0 58 1121.850512683392 0 1121.850512683392 PEAK CID FTMS 0 0 0 -1 0 6 6 W 1 -1 1.1092 0.0 0.0 0.049483 0.0 0.0 1155.1462635486216 897.4243868463499 2052.5706503949714 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.049483 - 5 + 1 1.51 23453.6 1.0 3034 5556 8586 SUDHL4_400M_050219_2,8592 SUDHL4_400M_050219_2,8592, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8594 46.779 729.0 77325.0 25 0 10646.0 -1 0 79 1117.5003407474835 0 1117.501757800579 PEAK CID FTMS 0 0 0 8593 94185.6015625 0.6646709046355556 1 -0.0724334716796875 1 6 {I|L}VQY{M(Oxidation (M))|F}ANQAG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F} 13 -1 78.763 0.0 0.0 3.5272 0.0 0.0 490.1867644033676 226.0842379205688 716.2710023239364 0.0 0.0 0.0 0.0 0 2.0 0.0 0.0 0.3807196863200844 {I|L}VQY{M(Oxidation (M))|F}ANQAG{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{M(Oxidation (M))|F} 3.5272 - 1950 + 1 1.499 39892.9 1.0 3035 5557 8593 SUDHL4_400M_050219_2,8594 SUDHL4_400M_050219_2,8594, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8595 46.79 610.0 87832.0 25 0 7893.1 23182 LSRPLYYTA 9 75 542.2961260783444 0 542.2958251833916 PEAK CID FTMS 0 0 0 8593 139913.46875 1.0 0 0.0 2 Unmodified _LSRPLYYTA_ ENSG00000176842|ENST00000394636|IRX5;ENST00000558597.1_2_16:54966274-54967782:+|nuORF;nc|ENSG00000176842|P78411-2|IRX5;nc|ENSG00000176842|P78411-3|IRX5 13.90604991867851 0.2674652324371145 6 YA{M(Oxidation (M))|F} 3 8 15.802 0.0 0.0 1.4597 0.0 0.0 190.09417476497865 508.2923678033813 698.3865425683599 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 YA{M(Oxidation (M))|F} 1.4597 - 23 + 1 1.499 47158.8 1.0 3036 5557 8593 SUDHL4_400M_050219_2,8595 SUDHL4_400M_050219_2,8595,LSRPLYYTA False True RLIEFAYTA 46.789866 542.295825183392 1387203.625 8593.0 ENSG00000079999|ENST00000171111|KEAP1 4.852344671885173 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8596 46.8 591.0 315470.0 25 0 23340.0 + 16946 KILPTLEAV 9 149 492.3104181566008 982.6062833800016 2 492.3104125857353 MULTI CID FTMS 0 0 0 8593 168574.546875 0.2954095357341684 -1 0.0604820251464843 3 Unmodified _KILPTLEAV_ ENSG00000143621|ENST00000361891|ILF2 53.832793166522166 0.0319663582346103 6 {I|L}{I|L}K[TP]{I|L}EAV 9 2 + 74.429 0.0 0.0 7.5746 7.5746 88.665 0.0 0.0 0.0 5.905654782420527 16.478174818886373 5.905654782420527 5.905654782420527 0 0.9247425010840048 1.6989700043360187 0.7302046884880937 0.5994850021680094 {I|L}{I|L}K[TP]{I|L}EAV;[TP]{I|L}{I|L}K{I|L}EAV;{I|L}{I|L}K[TP]E{I|L}AV;{I|L}{I|L}[TP]K{I|L}EAV;[K{I|L}]{I|L}[TP]{I|L}EAV;[TP]{I|L}E{I|L}K{I|L}AV;[TP]{I|L}{I|L}KE{I|L}AV;{I|L}{I|L}KHR{M(Oxidation (M))|F}AV;[{I|L}T]P{I|L}K{I|L}EAV;{I|L}{I|L}[TP]KE{I|L}AV 7.5746;6.9736;6.5744;6.2752;6.0758;6.0052;5.9734;5.8221;5.5913;5.275 -;-;-;-;+;-;-;-;-;- + 2846 1 1.499 144769.1 1.0 3037 5557 8593 SUDHL4_400M_050219_2,8596 SUDHL4_400M_050219_2,8596,KILPTLEAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8597 46.812 661.0 54067.0 25 0 9777.3 + -1 FYICMIKQCNP 11 65 745.3373876803312 0 745.3367797732353 PEAK CID FTMS 0 0 0 8593 161137.53125 1.0 0 0.0 4 2 Carbamidomethyl (C),Oxidation (M) _FYIC(Carbamidomethyl (C))M(Oxidation (M))IKQC(Carbamidomethyl (C))NP_ REV__nc|ENSG00000156500|Q6P4D5|PABIR3 3.2813086475875832 0.4761840153648598 6 Y{M(Oxidation (M))|F}ANQQAE 8 -1 39.361 0.0 0.0 2.6441 0.0 0.0 86.06959850343726 448.1608675592407 534.2304660626779 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{M(Oxidation (M))|F}ANQQAE 2.6441 - 515 + 1 1.499 35641.0 1.0 3038 5557 8593 SUDHL4_400M_050219_2,8597 SUDHL4_400M_050219_2,8597,FYICMIKQCNP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8598 46.823 638.0 137100.0 25 0 16164.0 22994 LSHCLLVTL 9 114 499.7885619997978 0 499.7885619997978 PEAK CID FTMS 0 0 0 -1 0 5 Unmodified _LSHCLLVTL_ ENSG00000130656|ENST00000252951|HBZ;ENSG00000188536|ENST00000251595|HBA2;ENSG00000206172|ENST00000320868|HBA1 23.1484247019978 0.1725298825155634 6 {I|L}S{I|L}{I|L}S 5 5 26.326 0.0 0.0 2.639 0.0 0.0 246.1383399713414 235.08396326236564 481.2223032337071 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 {I|L}S{I|L}{I|L}S 2.639 - 285 + 1 1.499 69626.0 1.0 3039 5557 8593 SUDHL4_400M_050219_2,8598 SUDHL4_400M_050219_2,8598,LSHCLLVTL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8599 46.836 738.0 129310.0 25 0 13270.0 -1 0 77 910.5013915896416 0 910.5013915896416 PEAK CID FTMS 0 0 0 -1 0 6 6 PTP 3 -1 19.693 0.0 0.0 1.0826 0.0 0.0 1264.679100462683 256.1316012018188 1520.8107016645015 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 PTP 1.0826 - 1284 + 1 1.499 68481.7 1.0 3040 5557 8593 SUDHL4_400M_050219_2,8599 SUDHL4_400M_050219_2,8599, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8601 46.84 55.0 700160.0 25 0 204160.0 20271 LLDRCGVF 8 66 461.7448941171408 921.4752353010816 2 461.7448303103447 MULTI CID FTMS 0 0 0 8600 841146.375 0.3566342405749249 6 -0.2832984924316406 1 Unmodified _LLDRCGVF_ ENSG00000175215|ENST00000398073|CTDSP2 5.760428011301431 0.7893668129297577 6 {I|L}{I|L}D 3 5 25.942 0.0 0.0 2.8153 0.0 0.0 0.0 577.2563992017253 577.2563992017253 13.735899786366232 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 + {I|L}{I|L}D 2.8153 + + 17 1 1.499 36625.4 1.0 3041 5558 8600 SUDHL4_400M_050219_2,8601 SUDHL4_400M_050219_2,8601,LLDRCGVF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8602 46.841 61.0 566090.0 25 0 118030.0 17180 KLKTVFHA 8 52 472.2879662384327 942.5613795436656 2 472.2879516482353 MULTI CID FTMS 0 0 0 8600 789124.0625 0.290147195298663 3 -0.1796951293945312 2 Unmodified _KLKTVFHA_ ENSG00000258659|ENST00000429814|TRIM34;ENST00000495668.1_1_11:5656076-5664473:+|nuORF 0.7936320650641473 0.8195151834710337 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.499 32234.1 1.0 3042 5558 8600 SUDHL4_400M_050219_2,8602 SUDHL4_400M_050219_2,8602,KLKTVFHA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8603 46.843 19.0 1380700.0 25 0 205560.0 + -1 LLVGCMLM 8 61 468.7393642088624 935.4641754845248 2 468.7393981814384 MULTI CID FTMS 0 0 0 8600 2998219.75 0.5991299564103956 5 -0.26580810546875 3 Carbamidomethyl (C) _LLVGC(Carbamidomethyl (C))MLM_ REV__ENSG00000046889|ENST00000288368|PREX2;REV__ENST00000517617.1_1_8:68864752-69023167:+|nuORF;REV__ENST00000529398.5_1_8:68864629-69017594:+|nuORF;REV__nc|ENSG00000046889|Q70Z35-3|PREX2;REV__nc|ENSG00000046889|Q70Z35-4|PREX2 2.889219685676258 0.8067950007271085 6 {I|L}DV 3 -1 14.693 0.0 0.0 1.5706 0.0 0.0 157.10469169721847 448.15302454166255 605.257716238881 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}DV 1.5706 - 13 + 1 1.499 28204.4 1.0 3043 5558 8600 SUDHL4_400M_050219_2,8603 SUDHL4_400M_050219_2,8603,LLVGCMLM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8604 46.844 55.0 894500.0 25 0 171930.0 + 29836 QQLLKRAHVE 10 62 611.3559653671452 1220.6973778010904 2 611.3560058474541 MULTI CID FTMS 0 0 0 8600 1022194.3125 0.8633618489830505 3 -0.1796951293945312 4 Unmodified _QQLLKRAHVE_ REV__ENSG00000039139|ENST00000265104|DNAH5 1.3295316138638542 0.7204866299213272 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.499 41935.1 1.0 3044 5558 8600 SUDHL4_400M_050219_2,8604 SUDHL4_400M_050219_2,8604,QQLLKRAHVE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8605 46.847 125.0 333440.0 25 0 33577.0 + 20292 LLDVPTAAV 9 82 449.76586557927385 897.5171782253477 2 449.7657958865166 MULTI CID FTMS 0 0 0 8600 499741.40625 0.3526117354343404 5 -0.26580810546875 5 Unmodified _LLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 23.1484247019978 0.2366544122328345 6 {I|L}{I|L}DV 4 5 31.414 0.0 0.0 3.5001 0.0 0.0 0.0 454.22995223341337 454.22995223341337 4.758950235313858 0.0 0.0 0.0 0 0.4247425010840047 1.6989700043360187 0.0 0.0 + {I|L}{I|L}DV 3.5001 + + 93 1 1.499 40506.6 1.0 3045 5558 8600 SUDHL4_400M_050219_2,8605 SUDHL4_400M_050219_2,8605,LLDVPTAAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8606 46.85 181.0 290620.0 25 0 53979.0 + 20075 LIVFIWIG 8 70 480.8011525693061 959.5877522054122 2 480.8010436892509 MULTI CID FTMS 0 0 0 8600 366191.9375 0.2593481732929418 2 -0.1445884704589843 6 Unmodified _LIVFIWIG_ REV__ENSG00000173198|ENST00000373304|CYSLTR1 6.354104778181461 0.7857632046190106 6 {I|L}{I|L}D 3 -1 20.458 0.0 0.0 2.1319 0.0 0.0 0.0 615.3692517994153 615.3692517994153 9.620119469137933 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 {I|L}{I|L}D 2.1319 - 16 1 1.499 44519.6 1.0 3046 5558 8600 SUDHL4_400M_050219_2,8606 SUDHL4_400M_050219_2,8606,LIVFIWIG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8607 46.864 800.0 125750.0 25 0 15108.0 + 14357 IEVDGKQVEL 10 121 565.3089164233322 1128.6032799134643 2 565.3083373904228 MULTI CID FTMS 0 0 0 8600 120681.7421875 1.0 0 0.0 7 Unmodified _IEVDGKQVEL_ ENSG00000067560|ENST00000418115|RHOA;ENSG00000143878|ENST00000272233|RHOB;ENSG00000155366|ENST00000339083|RHOC 50.13029200064056 0.0793861841501087 6 {I|L}EVDGKARE{I|L} 10 2 + 101.37 0.0 0.0 8.9817 8.9817 91.303 0.0 0.0 0.0 42.80851429239871 32.835329450030486 32.835329450030486 6.819398522674717 0 2.110924374808178 1.6989700043360187 2.079689690656103 0.7302046884880937 {I|L}EVDGKARE{I|L};{[QN]|[E{I|L}]|[KN]}VWEV{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}VWVE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}VWE{I|L}VE{I|L};{[QN]|[E{I|L}]|[KN]}WVEV{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}WVVE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}VDAEV{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}VDAVE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}WVE{I|L}VE{I|L};{I|L}EVD[KQ]RE{I|L} 8.9817;8.3774;8.3345;8.0569;7.9344;7.8915;7.8045;7.7616;7.6138;7.5475 -;-;-;-;-;-;-;-;-;- 3449 + 1 1.499 80211.0 0.9300000071525574 3047 5558 8600 SUDHL4_400M_050219_2,8607 SUDHL4_400M_050219_2,8607,IEVDGKQVEL True True IEVDGKQVEL 46.863882 565.308337390423 630819.9375 8600.0 ENSG00000155366|ENST00000339083|RHOC;;ENSG00000067560|ENST00000418115|RHOA;;ENSG00000143878|ENST00000272233|RHOB 3.997024774551392 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8608 46.878 800.0 152280.0 25 0 8259.3 + 10589 FVIRNIVEA 9 145 530.811178839628 1059.607804746056 2 530.8116943240166 MULTI CID FTMS 0 0 0 8600 114990.359375 0.097781073736831 3 -0.1796951293945312 8 Unmodified _FVIRNIVEA_ ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF;ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11 41.8396318013385 0.0653578398400075 6 [{M(Oxidation (M))|F}V]R{I|L}N{I|L}VEA 9 2 + 31.602 0.0 0.0 2.9824 2.9824 69.537 0.0 0.0 0.0 0.7497660990211585 0.7497660990211585 0.7497660990211585 0.7497660990211585 0 1.028659694992122 0.721246399047171 0.0 0.0 [{M(Oxidation (M))|F}V]R{I|L}N{I|L}VEA;{[MS]|[{M(Oxidation (M))|F}A]}V{I|L}N{I|L}RD{I|L};{[MS]|[{M(Oxidation (M))|F}A]}V{I|L}N{I|L}ERV;[{M(Oxidation (M))|F}V]R{I|L}GG{I|L}VEA;{[MS]|[{M(Oxidation (M))|F}A]}V{I|L}GG{I|L}RD{I|L};{[MS]|[{M(Oxidation (M))|F}A]}V{I|L}GG{I|L}ERV;[{M(Oxidation (M))|F}V][VG]{I|L}N{I|L}[W{I|L}];[{M(Oxidation (M))|F}V]{I|L}AN{I|L}ERV;[{M(Oxidation (M))|F}V]{I|L}AN{I|L}[RD]{I|L};[{I|L}V]{M(Oxidation (M))|F}RN{I|L}VEA 2.9824;2.9116;2.8961;2.1134;2.0426;2.027;1.8256;1.8139;1.623;1.0684 -;-;-;-;-;-;-;-;-;- 1840 1 1.499 98896.6 0.9100000262260436 3048 5558 8600 SUDHL4_400M_050219_2,8608 SUDHL4_400M_050219_2,8608,FVIRNIVEA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8609 46.887 546.0 181330.0 25 0 41933.0 -1 RLCTECGL 8 117 476.2226744943585 950.430796055517 2 476.7249023318291 MULTI CID FTMS 0 0 0 8600 371806.09375 0.3881747687012077 5 -0.26580810546875 9 Carbamidomethyl (C) _RLC(Carbamidomethyl (C))TECGL_ ENSG00000061492|ENST00000506684|WNT8A;nc|ENSG00000061492|Q9H1J5-2|WNT8A;nc|ENSG00000061492|Q9H1J5|WNT8A 14.581692164780916 0.6954967302934248 6 R{I|L}DV 4 -1 32.409 0.0 0.0 3.41 0.0 0.0 0.0 464.1248094489555 464.1248094489555 4.961987796517704 0.0 0.0 0.0 0 0.0 0.0 0.8252574989159953 0.0 R{I|L}DV 3.41 - 148 + 1 1.499 78364.5 1.0 3049 5558 8600 SUDHL4_400M_050219_2,8609 SUDHL4_400M_050219_2,8609,RLCTECGL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8610 46.9 753.0 141910.0 25 0 28355.0 + + 33839 SIIDTELKV 9 112 509.29465622733824 1016.5747595214764 2 509.2937499880791 MULTI CID FTMS 0 0 0 8600 181982.34375 1.0 0 0.0 10 Unmodified _SLEELLSKV_ nc|ENSG00000071539|Q15645-2|TRIP13;ENST00000512024.5_1_5:893053-908577:+|nuORF;ENSG00000071539|ENST00000166345|TRIP13 54.773552608820026 0.0299037012502309 6 {[TV]|[{I|L}S]}{I|L}DTE{I|L}KV 9 -1 + 64.9 0.0 0.0 6.3842 6.3842 91.315 0.0 0.0 0.0 41.44457319811228 12.12189282359298 12.12189282359298 11.76091259055682 0 0.6989700043360187 2.0 0.7742275032520141 0.25 {[TV]|[{I|L}S]}{I|L}DTE{I|L}KV;{[TV]|[{I|L}S]}VETE{I|L}KV;{[TV]|[{I|L}S]}{I|L}{[HG]|PP}[YT]KV;{[TV]|[{I|L}S]}{I|L}WW{I|L}TV;{[TV]|[{I|L}S]}{I|L}{[ET]|[MV]}AA{I|L}TV;{[TV]|[{I|L}S]}{I|L}{[ET]|[MV]}[K{I|L}][DV];{[TV]|[{I|L}S]}E[{I|L}T]AA{I|L}TV;{[TV]|[{I|L}S]}E[{I|L}T][K{I|L}][DV];{[TV]|[{I|L}S]}{I|L}{[ET]|[MV]}[RV]TV;{[TV]|[{I|L}S]}E[{I|L}T][RV]TV 6.3842;5.2273;4.0936;3.1371;1.9801;1.832;1.8025;1.6543;1.6337;1.4561 -;-;-;-;-;-;-;-;-;- 342 + 1 1.499 86925.0 1.0 3050 5558 8600 SUDHL4_400M_050219_2,8610 SUDHL4_400M_050219_2,8610,SLEELLSKV False False SIIDTELKV 46.900332 509.293749988079 843289.625 8600.0 nc|ENSG00000071539|Q15645-2|TRIP13;;ENST00000512024.5_1_5:893053-908577:+|nuORF;;ENSG00000071539|ENST00000166345|TRIP13 5.078915596008301 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8611 46.914 763.0 136570.0 25 0 26253.0 + 20060 LIRSYSVLVLC 11 104 633.3693854157528 0 633.3696166872978 PEAK CID FTMS 0 0 0 8600 176778.734375 0.7337208953182506 3 -0.1796951293945312 11 Unmodified _LIRSYSVLVLC_ REV__ENSG00000221836|ENST00000641693|OR2A5 3.2813086475875832 0.4761840153648598 6 D 1 -1 7.7423 0.0 0.0 0.61217 0.0 0.0 686.3578981734994 460.3074129693969 1146.6653111428964 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 D 0.61217 - 5 + 1 1.499 85407.8 1.0 3051 5558 8600 SUDHL4_400M_050219_2,8611 SUDHL4_400M_050219_2,8611,LIRSYSVLVLC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8612 46.929 800.0 131050.0 25 0 16460.0 + 1829 ALTGYLHTI 9 127 494.7765272434287 987.5385015536574 2 494.7765685915947 MULTI CID FTMS 0 0 0 8600 162898.40625 1.0 0 0.0 12 Unmodified _ALTGYLHTI_ ENSG00000118246|ENST00000402774|FASTKD2;ENST00000471788.1_1_2:207651391-207655428:+|nuORF;ENST00000487777.5_1_2:207631381-207653673:+|nuORF;nc|ENSG00000118246|Q9NYY8-2|FASTKD2 85.35673624503755 0.0162188719545379 6 [{I|L}A]TGY{I|L}HT{I|L} 9 0 + 76.988 0.0 0.0 7.7959 7.7959 96.977 0.0 0.0 0.0 37.73120960642628 26.44931033896141 26.44931033896141 32.31196758040872 0 0.7742275032520141 2.0 2.0986198691406326 0.0 + + [{I|L}A]TGY{I|L}HT{I|L};[{I|L}A][HS]YT{I|L}A{I|L};[{I|L}A]{[QG]|[NA]}{[DS]|[MA]|[CV]|TT}T{I|L}A{I|L};[{I|L}A][HS]Y{I|L}TA{I|L};[{I|L}A]{[QG]|[NA]}{[DS]|[MA]|[CV]|TT}{I|L}TA{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}WGTT{I|L}A{I|L};[{I|L}T]HGYT{I|L}A{I|L};[{I|L}A]{[QG]|[NA]}{I|L}[CS]{I|L}A{I|L};[H{I|L}]YGTT{I|L}A{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}WGT{I|L}TA{I|L} 7.7959;4.524;4.506;4.068;4.05;3.679;3.6029;3.3325;3.2297;3.223 +;-;-;-;-;-;-;-;-;- + 1703 + 1 1.499 82478.3 0.8299999833106995 3052 5558 8600 SUDHL4_400M_050219_2,8612 SUDHL4_400M_050219_2,8612,ALTGYLHTI True True ALTGYLHTI 46.92884 494.776568591595 797641.125 8600.0 nc|ENSG00000118246|Q9NYY8-2|FASTKD2;;ENST00000471788.1_1_2:207651391-207655428:+|nuORF;;ENSG00000118246|ENST00000402774|FASTKD2;;ENST00000487777.5_1_2:207631381-207653673:+|nuORF 5.943890412648519 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8613 46.943 800.0 145120.0 25 0 19341.0 -1 LYCFCSDDL 9 131 568.2267381473554 1134.438923361511 2 568.2274658083916 MULTI CID FTMS 0 0 0 8600 159915.484375 1.0 0 0.0 13 Carbamidomethyl (C) _LYC(Carbamidomethyl (C))FCSDDL_ ENST00000316660.6_1_18:57570570-57570669:+|nuORF 13.50788311687929 0.4710407108020397 6 [Y{I|L}]{I|L}D 4 -1 35.292 0.0 0.0 3.1109 0.0 0.0 0.0 627.1601656549436 627.1601656549436 15.052725051033065 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3252574989159953 0.0 [Y{I|L}]{I|L}D 3.1109 - 284 + 1 1.499 88298.5 0.8299999833106995 3053 5558 8600 SUDHL4_400M_050219_2,8613 SUDHL4_400M_050219_2,8613,LYCFCSDDL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8614 46.95 339.0 145350.0 25 0 15789.0 + 28430 PTAARRLE 8 92 457.2649028338805 912.515252734561 2 457.2642700076103 MULTI CID FTMS 0 0 0 8600 146249.078125 1.0 0 0.0 14 Unmodified _PTAARRLE_ REV__ENST00000555249.1_2_14:75151343-75179699:-|nuORF;REV__ENST00000556589.5_1_14:75158912-75179699:-|nuORF;REV__ENST00000556860.1_1_14:75168472-75179699:-|nuORF;REV__ENST00000557401.5_1_14:75158912-75179699:-|nuORF 13.50788311687929 0.7113601687236069 6 [TP]AA 4 -1 16.465 0.0 0.0 1.8044 0.0 0.0 0.0 569.316497201611 569.316497201611 6.187386808147384 0.0 0.0 0.0 0 0.0 0.721246399047171 0.3054621874040891 0.0 [TP]AA 1.8044 + + 20 1 1.499 44825.5 1.0 3054 5558 8600 SUDHL4_400M_050219_2,8614 SUDHL4_400M_050219_2,8614,PTAARRLE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8616 46.957 156.0 369460.0 25 0 75804.0 + 35312 SSRRRRPRAP 10 70 619.8690430541825 1237.723533175165 2 619.8691894412041 MULTI CID FTMS 0 0 0 8615 139982.8125 0.3103044391036587 4 -0.1509475708007812 1 Unmodified _SSRRRRPRAP_ REV__ENST00000402690.6_3_18:45423134-45457349:-|nuORF 1.4819007175156935 0.719781833666733 6 K 1 -1 1.1092 0.0 0.0 0.08962 0.0 0.0 823.4775442609056 283.1189364068969 1106.5964806678026 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.08962 - 1 + 1 1.499 47925.7 1.0 3055 5559 8615 SUDHL4_400M_050219_2,8616 SUDHL4_400M_050219_2,8616,SSRRRRPRAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8617 46.971 800.0 135630.0 25 0 21104.0 15014 ILSLHLLV 8 113 454.3024725070714 906.5903920809428 2 454.3017150759697 MULTI CID FTMS 0 0 0 -1 0 2 Unmodified _ILSLHLLV_ MER67C_dup844|chrX:304137-304231:+|1.13502019807356|0.4718080530988913|1.27|48.0|5|3|sense;nc|ENSG00000127603|O94854-4|MACF1;nc|ENSG00000127603|O94854|MACF1 22.4526382665184 0.5719518724627818 6 [VP]GVKPV{I|L}V 9 7 + 35.987 0.0 0.0 3.9695 3.9695 75.801 0.0 0.0 0.0 8.362424760180453 21.382893608989825 8.362424760180453 3.187587626244138 0 0.6989700043360187 1.0457574905606752 0.0 0.0 [VP]GVKPV{I|L}V;[VP]K[VG]PV{I|L}V;[PG]VVKPV{I|L}V;[VP]GVPKV{I|L}V;[VP][VP]GKV{I|L}V;[PG]VVPKV{I|L}V;[{I|L}P]AAKPV{I|L}V;[{I|L}P]AAPKV{I|L}V;[VP]GVP[{I|L}V]KV;[K{I|L}]{[HG]|PP}AAV{I|L}V 3.9695;3.6179;3.0373;2.9733;2.2159;2.0412;1.4535;0.45736;0.24235;0.20189 -;-;-;-;-;-;-;-;-;- 218 1 1.499 89141.4 0.5099999904632568 3056 5559 8615 SUDHL4_400M_050219_2,8617 SUDHL4_400M_050219_2,8617,ILSLHLLV False False False False ERV PXD020620_cell_line SUDHL4_400M_050219_2 8618 46.98 507.0 230710.0 25 0 38284.0 + 10639 FVQIRKGDGR 10 100 588.334966526466 1174.655380119732 2 588.3354369997978 MULTI CID FTMS 0 0 0 8615 143223.296875 0.3658569109836848 4 -0.1509475708007812 3 Unmodified _FVQIRKGDGR_ REV__ENST00000448967.1_1_2:202173962-202216133:-|nuORF 6.2057823575117 0.6979311171683138 6 {I|L} 1 -1 8.9258 0.0 0.0 0.75986 0.0 0.0 1043.560132782621 0.0 1043.560132782621 0.0 8.546680796787353 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.75986 + + 7 + 1 1.499 91649.3 1.0 3057 5559 8615 SUDHL4_400M_050219_2,8618 SUDHL4_400M_050219_2,8618,FVQIRKGDGR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8620 46.987 279.0 76616.0 25 0 7769.9 -1 SSKRLLMPFI 10 53 604.3480719154178 1206.6815908976355 2 604.8495361208916 MULTI CID FTMS 0 0 0 8619 119147.171875 0.7655236913300999 3 -0.1212196350097656 1 Oxidation (M) _SSKRLLM(Oxidation (M))PFI_ ENST00000500813.6_1_4:183812458-183812524:-|nuORF 0.4583401331227399 0.7245164002484112 6 S 1 -1 6.9897 0.0 0.0 0.57925 0.0 0.0 464.280298028298 652.3281954400999 1116.608493468398 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.57925 + + 1 + 1 1.499 20809.4 1.0 3058 5560 8619 SUDHL4_400M_050219_2,8620 SUDHL4_400M_050219_2,8620,SSKRLLMPFI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8621 46.996 482.0 215450.0 25 0 11016.0 -1 0 104 881.412780435523 1760.811007937846 2 881.4149047732353 MULTI CID FTMS 0 0 0 8619 216277.578125 0.4103004593356351 -4 0.2775039672851562 2 6 EY{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 13 -1 98.495 0.0 0.0 5.5937 0.0 0.0 229.15699435300104 0.0 229.15699435300104 0.0 74.71674634508629 0.0 0.0 0 0.8494850021680094 0.0 0.7302046884880937 1.6237125054200234 EY{M(Oxidation (M))|F}ANQQA[CS]C(Carbamidomethyl (C))V{I|L} 5.5937 - 7568 + 1 1.499 74163.6 1.0 3059 5560 8619 SUDHL4_400M_050219_2,8621 SUDHL4_400M_050219_2,8621, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8622 47.001 290.0 187170.0 25 0 25904.0 + 31006 RLFDDVPQV 9 78 544.7903994294904 1087.5662459257808 2 544.7905761599541 MULTI CID FTMS 0 0 0 8619 156560.078125 1.0 0 0.0 3 Unmodified _RLFDDVPQV_ ENSG00000164818|ENST00000297440|DNAAF5;ENST00000438961.1_1_7:766900-790557:+|nuORF;nc|ENSG00000164818|Q86Y56-2|DNAAF5 15.248480904072842 0.4239247793462406 6 DVPQV 5 4 29.961 0.0 0.0 2.7548 0.0 0.0 531.2811756818375 0.0 531.2811756818375 0.0 18.701702663714705 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 + DVPQV 2.7548 + + 35 1 1.499 52432.1 1.0 3060 5560 8619 SUDHL4_400M_050219_2,8622 SUDHL4_400M_050219_2,8622,RLFDDVPQV False True RLFDDVPQV 47.001257 544.790576159954 571508.625 8619.0 nc|ENSG00000164818|Q86Y56-2|DNAAF5;;ENST00000438961.1_1_7:766900-790557:+|nuORF;;ENSG00000164818|ENST00000297440|DNAAF5 4.776378631591797 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8623 47.015 782.0 141480.0 25 0 19944.0 + + -1 SLAEGRLYL 9 122 511.28516953457626 1020.5557861359524 2 511.2866088747978 MULTI CID FTMS 0 0 0 8619 120018.5390625 0.9741709554322852 2 -0.0850257873535156 4 Oxidation (M) _ISASLM(Oxidation (M))ALSI_ ENSG00000135931|ENST00000611582|ARMC9;nc|ENSG00000135931|Q7Z3E5-2|ARMC9 22.736283301280096 0.4578556481593033 6 {[TV]|[{I|L}S]}AE 4 -1 45.005 0.0 0.0 4.4099 0.0 0.0 0.0 617.3426404558556 617.3426404558556 19.330984399557423 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.0 {[TV]|[{I|L}S]}AE 4.4099 - 631 + 1 1.499 86716.6 1.0 3061 5560 8619 SUDHL4_400M_050219_2,8623 SUDHL4_400M_050219_2,8623,ISASLMALSI False False SLAEGRLYL 47.014786 511.286608874798 389290.375 8619.0 ENSG00000135931|ENST00000611582|ARMC9;;nc|ENSG00000135931|Q7Z3E5-2|ARMC9 0.7934161027272543 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8625 47.031 800.0 118420.0 25 0 23187.0 + -1 IEKFKKMLEK 10 95 655.3819204895708 1308.7492880459415 2 655.3818847537041 MULTI CID FTMS 0 0 0 8624 124556.5390625 0.302614119681792 -5 0.3126106262207031 1 Oxidation (M) _IEKFKKM(Oxidation (M))LEK_ REV__ENSG00000118412|ENST00000551025|CASP8AP2;REV__ENST00000237177.10_1_6:90556308-90583533:+|nuORF;REV__ENST00000547893.5_1_6:90556308-90566925:+|nuORF;REV__ENST00000548224.2_1_6:90556308-90583533:+|nuORF;REV__nc|ENSG00000118412|Q9UKL3|CASP8AP2 3.2813086475875832 0.7114585191678878 6 K 1 -1 1.2591 0.0 0.0 0.096203 0.0 0.0 850.4804109480884 327.1458458459997 1177.626256794088 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.096203 + + 17 + 1 1.499 87102.3 0.4600000083446502 3062 5561 8624 SUDHL4_400M_050219_2,8625 SUDHL4_400M_050219_2,8625,IEKFKKMLEK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8626 47.045 800.0 111390.0 25 0 17921.0 + 14963 IISSVIQKF 9 138 517.8155656261771 1033.616578319154 2 517.8159057497978 MULTI CID FTMS 0 0 0 8624 87956.453125 0.9977451882860392 -1 0.0351066589355468 2 Unmodified _ILNYLKSAL_ ENSG00000164209|ENST00000355943|SLC25A46;nc|ENSG00000164209|Q96AG3-2|SLC25A46 30.63653989081413 0.1413794767160703 6 {I|L}{I|L}C(Carbamidomethyl (C)){I|L}{I|L}QK 7 6 50.652 0.0 0.0 4.9005 0.0 0.0 0.0 162.05661951236564 162.05661951236564 21.41184191760103 0.0 0.0 0.0 0 0.9985619177777272 2.0 0.0 0.4247425010840047 {I|L}{I|L}C(Carbamidomethyl (C)){I|L}{I|L}QK 4.9005 - 800 + 1 1.499 71382.5 0.4300000071525574 3063 5561 8624 SUDHL4_400M_050219_2,8626 SUDHL4_400M_050219_2,8626,ILNYLKSAL False False IISSVIQKF 47.045 517.815905749798 403852.21875 8624.0 ENSG00000164209|ENST00000355943|SLC25A46;;nc|ENSG00000164209|Q96AG3-2|SLC25A46 3.859384536743164 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8627 47.051 323.0 162860.0 25 0 16359.0 + 37857 TLVDFDNHL 9 101 537.2665712017903 1072.5185894703804 2 537.2673217654228 MULTI CID FTMS 0 0 0 8624 102204.515625 0.4329796244851445 -4 0.2521286010742187 3 Unmodified _TLVDFDNHL_ ENSG00000131148|ENST00000253457|EMC8;ENST00000597291.1_1_16:85813316-85813502:-|nuORF 36.12702656103203 0.0967173616627612 6 [{I|L}T]V[HQ][{M(Oxidation (M))|F}E]S{I|L} 9 5 + 43.438 0.0 0.0 4.0501 4.0501 77.373 0.0 0.0 0.0 18.779670299309885 2.125299705980197 2.125299705980197 4.771212547196619 0 0.4247425010840047 2.0 0.5554621874040891 0.3054621874040891 [{I|L}T]V[HQ][{M(Oxidation (M))|F}E]S{I|L};[{I|L}T]V[HQ][{M(Oxidation (M))|F}E]TV;[{I|L}T][HN]{I|L}[{M(Oxidation (M))|F}E]S{I|L};[{I|L}T][HN]{I|L}[{M(Oxidation (M))|F}E]TV;{NN|[MP]|[D{I|L}]|[EV]}QV[WY]H{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q{[HG]|PP}QQT{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}[AG]V[WY]H{I|L};{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}[QA]{I|L}T{M(Oxidation (M))|F};[Y{M(Oxidation (M))|F}][PS][QA]{I|L}T{M(Oxidation (M))|F};{[TV]|[{I|L}S]}{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{I|L}[QA]T{M(Oxidation (M))|F} 4.0501;3.6052;3.1135;2.6687;1.8928;1.7126;1.0292;0.88418;0.65656;0.23247 -;-;-;-;-;-;-;-;-;- 148 + 1 1.499 47076.4 1.0 3064 5561 8624 SUDHL4_400M_050219_2,8627 SUDHL4_400M_050219_2,8627,TLVDFDNHL True True TLVDFDNHL 47.05089 537.267321765423 1514813.75 8624.0 ENSG00000131148|ENST00000253457|EMC8;;ENST00000597291.1_1_16:85813316-85813502:-|nuORF 5.200703779856364 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8628 47.065 800.0 193020.0 25 0 14085.0 + 33571 MLANDIARL 9 153 508.3018625351411 1014.5891721370822 2 508.3017455935478 MULTI CID FTMS 0 0 0 8624 95051.453125 0.0158516946336538 -7 0.3334426879882812 4 Unmodified _SILWVWVL_ ENST00000484846.1_1_11:64621807-64623066:-|nuORF;ENSG00000110047|ENST00000320631|EHD1 34.18733598223924 0.3315367612694167 6 [{M(Oxidation (M))|F}V]A[RP]T{I|L}V{I|L} 9 7 + 43.962 0.0 0.0 4.333 4.333 84.606 0.0 0.0 0.0 6.307578903143366 21.28607912182254 6.307578903143366 11.812412373755867 0 1.3494850021680094 0.0 0.3054621874040891 0.0 [{M(Oxidation (M))|F}V]A[RP]T{I|L}V{I|L};[{I|L}T]C[RP]T{I|L}V{I|L};{[MS]|[{M(Oxidation (M))|F}A]}V[RP]T{I|L}V{I|L};[PG]Y[RP]T{I|L}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WR]T{I|L}V{I|L};{[TV]|[{I|L}S]}[VG][DV]T{I|L}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[{I|L}P]A{M(Oxidation (M))|F}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}K[DV]T{I|L}V{I|L};{[RE]|[WV]}{[RE]|[WV]}T{I|L}V{I|L};[K{I|L}]D[DV]T{I|L}V{I|L} 4.333;3.1687;3.1634;2.7048;2.3116;2.1952;2.0755;2.0095;1.6825;1.1465 -;-;-;-;-;-;-;-;-;- 644 1 1.499 118528.9 0.9300000071525574 3065 5561 8624 SUDHL4_400M_050219_2,8628 SUDHL4_400M_050219_2,8628,SILWVWVL False False MLANDIARL 47.064704 508.301745593548 960470.25 8624.0 ENST00000484846.1_1_11:64621807-64623066:-|nuORF;;ENSG00000110047|ENST00000320631|EHD1 2.1663577556610107 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8630 47.073 249.0 239230.0 25 0 16832.0 + 16947 KILPTLEAV 9 90 492.3104181566008 982.6062833800016 2 492.3104125857353 MULTI CID FTMS 0 0 0 8629 191385.75 0.3353838204029615 4 -0.18353271484375 1 Unmodified _KILPTLEAV_ ENSG00000143621|ENST00000361891|ILF2 39.94969957227396 0.0757326808254658 6 [TP]{I|L}{I|L}K{I|L}EAV 9 4 + 60.372 0.0 0.0 6.144 6.144 91.713 0.0 0.0 0.0 10.530805400352795 52.33923503390403 10.530805400352795 17.66355189324576 0 0.9247425010840048 0.8538719643217619 1.3076556684809653 0.0 [TP]{I|L}{I|L}K{I|L}EAV;[TP]{I|L}E{I|L}[K{I|L}]AV;[TP]{I|L}{I|L}E[K{I|L}]AV;{[QN]|[E{I|L}]|[KN]}[TP]{I|L}[K{I|L}]AV;{[QN]|[E{I|L}]|[KN]}[TP]{I|L}RRV 6.144;4.3464;3.5545;2.5035;1.412 -;-;-;-;- 289 1 1.499 49693.2 1.0 3066 5562 8629 SUDHL4_400M_050219_2,8630 SUDHL4_400M_050219_2,8630,KILPTLEAV True True KILPTLEAV 47.073208 492.310412585735 7496693.5 8629.0 ENSG00000143621|ENST00000361891|ILF2 5.269126256306966 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8631 47.087 800.0 51361.0 25 0 3262.8 -1 0 54 987.12996599531 2958.368068586129 3 987.4654418826104 MULTI CID FTMS 0 0 0 8629 54217.09375 0.1660756840062316 4 -0.18353271484375 2 6 M 1 -1 11.99 0.0 0.0 0.40528 0.0 0.0 471.1758633099001 2353.076397528181 2824.2522608380814 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 M 0.40528 - 32 + 1 1.499 34512.2 0.4399999976158142 3067 5562 8629 SUDHL4_400M_050219_2,8631 SUDHL4_400M_050219_2,8631, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8632 47.101 800.0 54034.0 25 0 3700.0 -1 0 60 981.127865665536 2940.361767596808 3 981.4625121951104 MULTI CID FTMS 0 0 0 8629 70316.2890625 0.9908052721210128 1 -0.03619384765625 3 6 YE{I|L} 3 -1 10.802 0.0 0.0 0.36737 0.0 0.0 1912.8613191918 619.2852266900999 2532.1465458819 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YE{I|L} 0.36737 - 77 + 1 1.499 38468.3 0.4099999964237213 3068 5562 8629 SUDHL4_400M_050219_2,8632 SUDHL4_400M_050219_2,8632, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8634 47.106 94.0 702740.0 25 0 147600.0 + -1 PGKVVCHRLR 10 72 611.3559653671452 1220.6973778010904 2 611.3561889529228 MULTI CID FTMS 0 0 0 8633 743873.9375 0.6282879587928661 8 -0.4078941345214844 1 Carbamidomethyl (C) _PGKVVC(Carbamidomethyl (C))HRLR_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 1.4819007175156935 0.719781833666733 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.499 55816.0 1.0 3069 5563 8633 SUDHL4_400M_050219_2,8634 SUDHL4_400M_050219_2,8634,PGKVVCHRLR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8635 47.118 732.0 131440.0 25 0 24355.0 + 16094 ITRRTSLP 8 113 472.2879662384327 942.5613795436656 2 472.2884704470634 MULTI CID FTMS 0 0 0 8633 166366.953125 0.0611702356238856 8 -0.4078941345214844 2 Unmodified _ITRRTSLP_ REV__ENSG00000248383|ENST00000253807|PCDHAC1;REV__nc|ENSG00000248383|Q9H158-2|PCDHAC1 2.889219685676258 0.8067950007271085 6 {I|L} 1 -1 11.109 0.0 0.0 1.1786 0.0 0.0 811.4663610883905 0.0 811.4663610883905 0.0 -0.1498161168872158 -0.1498161168872158 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1786 + + 13 + 1 1.499 77263.1 1.0 3070 5563 8633 SUDHL4_400M_050219_2,8635 SUDHL4_400M_050219_2,8635,ITRRTSLP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8637 47.126 221.0 205870.0 25 0 37360.0 -1 LLMGWMGI 8 69 468.7393642088624 935.4641754845248 2 468.7393371462822 MULTI CID FTMS 0 0 0 8636 229087.53125 0.0457782331038202 11 -0.5445899963378906 1 Oxidation (M) _LLMGWM(Oxidation (M))GI_ ENSG00000115760|ENST00000421745|BIRC6 24.20995872069341 0.5349487244130675 6 {I|L}{I|L} 2 -1 39.706 0.0 0.0 4.2445 0.0 0.0 0.0 706.273827887777 706.273827887777 23.508337601396857 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {I|L}{I|L} 4.2445 + + 34 + 1 1.499 37718.9 1.0 3071 5564 8636 SUDHL4_400M_050219_2,8637 SUDHL4_400M_050219_2,8637,LLMGWMGI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8638 47.13 163.0 279640.0 25 0 31346.0 + 15911 KMMDVTVTI 9 79 535.2667304576909 1068.5189079821816 2 535.2673828005791 MULTI CID FTMS 0 0 0 8636 245092.890625 0.9408258303719748 -1 0.0174903869628906 2 Unmodified _ISVCGDVYTL_ ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;nc|ENSG00000185164|Q5JPE7|NOMO2 32.30548876998284 0.2428506522065767 6 VTVT{I|L} 5 6 36.396 0.0 0.0 3.4062 0.0 0.0 537.1918812482437 0.0 537.1918812482437 0.0 11.095916170166774 0.0 0.0 0 0.8182503180159344 0.0 0.75 0.0 VTVT{I|L} 3.4062 - 222 1 1.499 42845.6 1.0 3072 5564 8636 SUDHL4_400M_050219_2,8638 SUDHL4_400M_050219_2,8638,ISVCGDVYTL False True KMMDVTVTI 47.129639 535.267382800579 1135805.875 8636.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 5.591221809387207 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8639 47.141 633.0 160660.0 25 0 28085.0 + 14826 ILFNDPFW 8 108 526.2639613366192 0 526.2640258669853 PEAK CID FTMS 0 0 0 8636 121182.5546875 0.5761463093968053 -2 0.0536842346191406 3 Unmodified _ILFNDPFW_ REV__ENSG00000136051|ENST00000332180|WASHC4;REV__ENST00000311317.8_1_12:105501518-105541426:+|nuORF;REV__nc|ENSG00000136051|Q2M389-2|WASHC4 28.486842064014134 0.2575685520298453 6 G{M(Oxidation (M))|F}PE 4 -1 29.825 0.0 0.0 2.8391 0.0 0.0 147.0709342139656 470.2372507751193 617.3081849890849 0.0 0.0 0.0 0.0 0 0.7887254899964358 0.0 0.0 0.0 G{M(Oxidation (M))|F}PE 2.8391 - 131 + 1 1.499 84245.9 1.0 3073 5564 8636 SUDHL4_400M_050219_2,8639 SUDHL4_400M_050219_2,8639,ILFNDPFW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8640 47.155 800.0 59153.0 25 0 5161.0 14985 ILQVQFLTTT 10 82 582.3350249375534 1162.655496941907 2 582.3351318240166 MULTI CID FTMS 0 0 0 8636 120034.125 0.5735852189688645 -2 0.0536842346191406 4 Unmodified _ILQVQFLTTT_ chr4:70228760-70231195|10|26.5|0.93|4.84|+|2|TE_info:Tigger1,Tigger1_dup3143,TcMar-Tigger,DNA,donor,-,70227670,70228760|None,FDCSP|1 3.944395688203298 0.708391353636983 6 P 1 10 10.0 0.0 0.0 0.8601 0.0 0.0 1047.5917132278423 0.0 1047.5917132278423 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.8601 - 38 + 1 1.499 41935.8 0.5099999904632568 3074 5564 8636 SUDHL4_400M_050219_2,8640 SUDHL4_400M_050219_2,8640,ILQVQFLTTT False False False False TE_chimeric_transcript PXD020620_cell_line SUDHL4_400M_050219_2 8641 47.161 350.0 191120.0 25 0 18821.0 + 18630 LAFPCCSSSL 10 104 514.2322505016713 1026.4499480701425 2 514.2321044802666 MULTI CID FTMS 0 0 0 8636 121740.3203125 1.0 0 0.0 5 Unmodified _LAFPCCSSSL_ REV__ENST00000380243.8_2_14:99979836-99979959:-|nuORF 19.256988751693697 0.5244284437930726 6 [{I|L}A]{M(Oxidation (M))|F}PT 5 -1 35.211 0.0 0.0 3.4304 0.0 0.0 0.0 494.1375521295532 494.1375521295532 13.784809756568528 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [{I|L}A]{M(Oxidation (M))|F}PT 3.4304 - 131 + 1 1.499 57714.4 1.0 3075 5564 8636 SUDHL4_400M_050219_2,8641 SUDHL4_400M_050219_2,8641,LAFPCCSSSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8643 47.174 614.0 107260.0 25 0 18636.0 30456 RDVILNLYFL 10 88 633.3693854157528 0 633.3692504763603 PEAK CID FTMS 0 0 0 8642 108358.109375 0.4497407977645384 10 -0.50213623046875 1 Unmodified _RDVILNLYFL_ ENST00000533739.1_1_11:89951170-89956122:-|nuORF 3.5964929083625545 0.3961065659209837 6 {I|L} 1 9 5.4846 0.0 0.0 0.43366 0.0 0.0 686.3605226852181 462.2495821588501 1148.6101048440682 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.43366 + + 2 + 1 1.499 56347.1 1.0 3076 5565 8642 SUDHL4_400M_050219_2,8643 SUDHL4_400M_050219_2,8643,RDVILNLYFL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8644 47.179 234.0 437270.0 25 0 49828.0 + 41015 VMAPRTVLL 9 96 500.3043740301563 998.5941951271126 2 500.3045837283134 MULTI CID FTMS 0 0 0 8642 335593.96875 0.0692194732460174 -1 0.0424537658691406 2 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 32.78568957990786 0.1150597335874693 6 VMA 3 6 48.188 0.0 0.0 4.8255 0.0 0.0 0.0 694.4265477004751 694.4265477004751 6.750743698387254 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + VMA 4.8255 + + 243 + 1 1.499 80630.5 1.0 3077 5565 8642 SUDHL4_400M_050219_2,8644 SUDHL4_400M_050219_2,8644,VMAPRTVLL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8645 47.184 282.0 247650.0 25 0 32829.0 + 11584 GKPLALELGFS 11 91 566.322807910563 1130.631062887926 2 566.3224975466728 MULTI CID FTMS 0 0 0 8642 244351.96875 0.7577189231586058 -1 0.0424537658691406 3 Unmodified _GKPLALELGFS_ REV__ENST00000490092.1_1_7:149571926-149575857:+|nuORF 10.799506525563784 0.8105043987015127 6 E{I|L}[YQ] 4 -1 16.555 0.0 0.0 1.4642 0.0 0.0 579.390428611525 0.0 579.390428611525 0.0 12.417665879116624 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 E{I|L}[YQ] 1.4642 - 34 1 1.499 55568.8 1.0 3078 5565 8642 SUDHL4_400M_050219_2,8645 SUDHL4_400M_050219_2,8645,GKPLALELGFS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8646 47.194 596.0 181430.0 25 0 40297.0 + 16099 ITSDYQLRV 9 82 547.7959842701205 1093.5774156070408 2 547.7960082888603 MULTI CID FTMS 0 0 0 8642 182021.328125 1.0 0 0.0 4 Unmodified _ITSDYQLRV_ REV__nc|ENSG00000170703|Q8N841-4|TTLL6 24.020572477871973 0.2255576514309169 6 [{I|L}T]SDYN{I|L}R{I|L} 9 -1 + 74.857 0.0 0.0 6.8451 6.8451 90.569 0.0 0.0 0.0 45.28704924578477 9.87765543582988 9.87765543582988 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.5994850021680094 [{I|L}T]SDYN{I|L}R{I|L};[{I|L}T]SDYGG{I|L}R{I|L};[{I|L}T]SD{I|L}[YN]R{I|L};[{I|L}T]{I|L}{[DS]|[MA]|[CV]|TT}[YN]R{I|L};[{I|L}T]{I|L}[YT][KP]C(Carbamidomethyl (C))V;[{I|L}T]{I|L}[YT][C(Carbamidomethyl (C))K]PV;[{I|L}T][C(Carbamidomethyl (C))K][YT]{I|L}PV;VVC[MN]{M(Oxidation (M))|F}{I|L}R{I|L};VVE{[DS]|[MA]|[CV]|TT}[YN]R{I|L};[YN][KP][YT]{I|L}PV 6.8451;6.0031;4.9526;3.5861;2.2044;1.977;1.9648;1.5923;0.79618;0.36336 -;-;-;-;-;-;-;-;-;- 322 + 1 1.499 85541.0 1.0 3079 5565 8642 SUDHL4_400M_050219_2,8646 SUDHL4_400M_050219_2,8646,ITSDYQLRV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8647 47.208 800.0 163680.0 25 0 14527.0 + 31255 RLVDLSGGWDA 11 117 594.8036855563505 1187.592818179501 2 594.8040038943291 MULTI CID FTMS 0 0 0 8642 141189.921875 1.0 0 0.0 5 Unmodified _RLVDLSGGWDA_ ENST00000262518.8_1_16:30710550-30715400:+|nuORF;ENST00000411466.6_3_16:30709553-30715400:+|nuORF 62.86856922530385 0.057503257068159 6 [R{I|L}]VD{I|L}SGGWDA 11 0 + 95.382 0.0 0.0 8.0315 8.0315 87.377 0.0 0.0 0.0 11.672239455075797 63.16303370179973 11.672239455075797 3.4948500216800937 0 1.048455006504028 0.8860566476931632 1.110924374808178 0.6747425010840047 + + [R{I|L}]VD{I|L}SGGWDA;[R{I|L}]VD{I|L}SGGWGE;[R{I|L}]VD{I|L}SGGGEW;[R{I|L}]VD{I|L}SGGGWE;[R{I|L}]VD{I|L}SNWDA;[R{I|L}]VD{I|L}SNGEW;[R{I|L}]VD{I|L}SNWGE;[R{I|L}]VD{I|L}SNGWE;[R{I|L}]VD{I|L}SGNEW;[R{I|L}]VD{I|L}SGNWE 8.0315;7.7372;7.7372;7.633;7.1572;6.8629;6.8629;6.7588;6.3844;6.2803 +;-;-;-;-;-;-;-;-;- + 1263 1 1.499 100045.0 0.550000011920929 3080 5565 8642 SUDHL4_400M_050219_2,8647 SUDHL4_400M_050219_2,8647,RLVDLSGGWDA True True RLVDLSGGWDA 47.207959 594.804003894329 803168.3125 8642.0 ENST00000262518.8_1_16:30710550-30715400:+|nuORF;;ENST00000411466.6_3_16:30709553-30715400:+|nuORF 7.736849943796794 2.0 True 11.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8648 47.222 800.0 74656.0 25 0 18906.0 + 20054 LIQVNLNIWLT 11 80 663.8952378713091 1325.775922809418 2 663.8949462771416 MULTI CID FTMS 0 0 0 8642 112609.8359375 0.8029894549989036 -1 0.0424537658691406 6 Unmodified _LIQVNLNIWLT_ REV__ENSG00000197653|ENST00000673944|DNAH10;REV__nc|ENSG00000197653|Q8IVF4|DNAH10 2.735195868890462 0.8622431031272658 6 {I|L} 1 -1 9.464 0.0 0.0 0.71384 0.0 0.0 1194.6807670250414 0.0 1194.6807670250414 0.0 9.463950151760656 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.71384 + + 22 + 1 1.499 56390.2 0.5 3081 5565 8642 SUDHL4_400M_050219_2,8648 SUDHL4_400M_050219_2,8648,LIQVNLNIWLT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8649 47.233 639.0 127530.0 25 0 14993.0 + 43702 YAYDGKDYLAL 11 108 646.3135016123717 1290.6124502915434 2 646.3140136599541 MULTI CID FTMS 0 0 0 8642 110984.1328125 0.7809255092408438 -1 0.0424537658691406 7 Unmodified _YAYDGKDYLAL_ ENSG00000204632|ENST00000360323|HLA-G;nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G 53.4695610476455 0.0984156443811599 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAYA{I|L}{I|L} 11 7 + 72.031 0.0 0.0 5.5812 5.5812 78.999 0.0 0.0 0.0 15.0962739964637 16.57577319177794 15.0962739964637 1.7609125905568137 0 1.0 2.0 0.6861818737241735 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAYA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYAY{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YD[QT]AYA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YD[QT]AY{I|L}A{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DYA{I|L}YA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YD[QT]A{I|L}YA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]AYDYA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}YD[KG]DYA{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DY{I|L}AYA{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[QT]DAYYA{I|L}{I|L} 5.5812;5.4447;5.4349;5.2985;5.2115;5.0652;5.0179;4.9684;4.9519;4.9264 -;-;-;-;-;-;-;-;-;- 2961 1 1.499 65801.3 1.0 3082 5565 8642 SUDHL4_400M_050219_2,8649 SUDHL4_400M_050219_2,8649,YAYDGKDYLAL True True YAYDGKDYLAL 47.232938 646.314013659954 742878.8125 8642.0 nc|ENSG00000204632|P17693-4|HLA-G;;nc|ENSG00000204632|P17693-5|HLA-G;;ENSG00000204632|ENST00000360323|HLA-G 3.183457354704539 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8650 47.248 800.0 80964.0 25 0 7218.0 + -1 YLMEVTHDL 9 98 561.2516896342496 1120.488826335299 2 561.2520019412041 MULTI CID FTMS 0 0 0 8642 96358.234375 1.0 0 0.0 8 Carbamidomethyl (C) _LIYYC(Carbamidomethyl (C))MRC_ nc|ENSG00000133706|Q9P2J5-2|LARS1;ENSG00000133706|ENST00000394434|LARS1;nc|ENSG00000133706|Q9P2J5-3|LARS1 6.354104778181461 0.7857632046190106 6 {NN|[MP]|[D{I|L}]|[EV]}G{[CP]|[EA]}{I|L}ES[C(Carbamidomethyl (C))K] 10 -1 + 24.9 0.0 0.0 2.2222 2.2222 79.595 0.0 0.0 0.0 2.8833673396684745 12.22357194224834 2.8833673396684745 10.51152522447381 0 0.0 1.0969100130080565 0.0 0.3807196863200844 {NN|[MP]|[D{I|L}]|[EV]}G{[CP]|[EA]}{I|L}ES[C(Carbamidomethyl (C))K];{NN|[MP]|[D{I|L}]|[EV]}QQ{[QD]|[EN]|[WG]|[KD]|[RS]}S[C(Carbamidomethyl (C))K];{NN|[MP]|[D{I|L}]|[EV]}G[QA]{[QD]|[EN]|[WG]|[KD]|[RS]}S[C(Carbamidomethyl (C))K];{[CP]|[EA]}[DG]{I|L}{I|L}ES[C(Carbamidomethyl (C))K];{NN|[MP]|[D{I|L}]|[EV]}[HS]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[C(Carbamidomethyl (C))K];{[{M(Oxidation (M))|F}D]|MM}A[HK]ES[C(Carbamidomethyl (C))K];{[TV]|[{I|L}S]}[HD]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S[C(Carbamidomethyl (C))K];[Y{I|L}][{M(Oxidation (M))|F}V][YE][C(Carbamidomethyl (C))K];{[CP]|[EA]}T[PS]{I|L}ES[C(Carbamidomethyl (C))K];[YN][MN]{I|L}{I|L}H{[C(Carbamidomethyl (C))G]|[NC]} 2.2222;1.2841;1.1726;1.1512;1.1269;0.85116;0.64137;0.52331;0.4567;0.41791 -;-;-;-;-;-;-;-;-;- 153 1 1.499 53547.2 0.4300000071525574 3083 5565 8642 SUDHL4_400M_050219_2,8650 SUDHL4_400M_050219_2,8650,LIYYCMRC False False YLMEVTHDL 47.248236 561.252001941204 70772.84375 8642.0 nc|ENSG00000133706|Q9P2J5-2|LARS1;;ENSG00000133706|ENST00000394434|LARS1;;nc|ENSG00000133706|Q9P2J5-3|LARS1 1.5524130662282307 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8652 47.257 258.0 191910.0 25 0 10728.0 -1 0 73 881.412780435523 1760.811007937846 2 881.4137451052666 MULTI CID FTMS 0 0 0 8651 212679.46875 0.4034744816170891 2 -0.0741615295410156 1 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}Y 12 -1 71.914 0.0 0.0 4.0841 0.0 0.0 0.0 355.1977330830311 355.1977330830311 52.70578039093364 0.0 0.0 0.0 0 0.5629529932484498 1.6989700043360187 0.0 1.274227503252014 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}Y 4.0841 - 2117 1 1.499 40197.5 1.0 3084 5566 8651 SUDHL4_400M_050219_2,8652 SUDHL4_400M_050219_2,8652, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8653 47.271 800.0 138830.0 25 0 27733.0 + 9360 FINKARITLY 10 93 619.8690430541825 1237.723533175165 2 619.8692504763603 MULTI CID FTMS 0 0 0 8651 226278.671875 0.5015992685337188 11 -0.4598121643066406 2 Unmodified _FINKARITLY_ REV__ENST00000503808.5_1_4:57204874-57250274:-|nuORF;REV__nc|ENSG00000157426|Q4L235-4|AASDH 1.4819007175156935 0.719781833666733 6 N 1 -1 1.5938 0.0 0.0 0.12877 0.0 0.0 687.4236197003587 433.23496423892817 1120.658583939287 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.12877 + + 16 + 1 1.499 84961.7 0.8600000143051147 3085 5566 8651 SUDHL4_400M_050219_2,8653 SUDHL4_400M_050219_2,8653,FINKARITLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8654 47.272 49.0 1046500.0 25 0 227580.0 16013 ITELQKNGR 9 71 529.7991030960814 1057.5836532589626 2 529.7995483279228 MULTI CID FTMS 0 0 0 8651 1136000.0 1.0 0 0.0 3 Unmodified _ITELQKNGR_ ENST00000441868.2_1_6:135219409-135219799:+|nuORF 25.399314129420983 0.2080152500878129 6 [{I|L}T]MK{I|L}MD 7 6 60.406 0.0 0.0 5.7117 0.0 0.0 0.0 222.12505518131096 222.12505518131096 37.76757262825612 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.3807196863200844 [{I|L}T]MK{I|L}MD 5.7117 - 260 + 1 1.499 45026.7 1.0 3086 5566 8651 SUDHL4_400M_050219_2,8654 SUDHL4_400M_050219_2,8654,ITELQKNGR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8655 47.274 94.0 722680.0 25 0 110690.0 + 37255 TIMPKDIQL 9 110 537.7968008239055 1073.579048714611 2 537.7969848513603 MULTI CID FTMS 0 0 0 8651 525798.8125 0.4705744849919581 -2 0.1298484802246093 4 Oxidation (M) _TIM(Oxidation (M))PKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 66.45667989310934 0.0225072657982126 6 [{I|L}T]{M(Oxidation (M))|F}P 4 5 42.435 0.0 0.0 3.9527 0.0 0.0 0.0 612.3343599908811 612.3343599908811 6.509942130342893 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 + [{I|L}T]{M(Oxidation (M))|F}P 3.9527 + + 850 + 1 1.499 57705.6 1.0 3087 5566 8651 SUDHL4_400M_050219_2,8655 SUDHL4_400M_050219_2,8655,TIMPKDIQL True False TIMPKDIQL 47.274134 537.79698485136 10577036.0 8651.0 ENSG00000278828|ENST00000685041|H3C10;;nc|ENSG00000273213|Q5TEC6|H3-7;;ENSG00000203852|ENST00000403683|H3C15;;ENSG00000274750|ENST00000614911|H3C6;;ENSG00000273983|ENST00000614378|H3C8;;ENSG00000183598|ENST00000331491|H3C13;;ENSG00000197409|ENST00000356476|H3C4;;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;;ENSG00000203811|ENST00000369158|H3C14;;ENSG00000275714|ENST00000613854|H3C1;;ENSG00000188375|ENST00000340398|H3-5;;ENSG00000277775|ENST00000618052|H3C7;;ENST00000401004.2_1:120904811-120905087:+|nuORF;;ENSG00000197153|ENST00000359303|H3C12;;ENSG00000132475|ENST00000254810|H3-3B;;ENSG00000168148|ENST00000366696|H3-4;;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;;ENSG00000275379|ENST00000616365|H3C11;;ENSG00000163041|ENST00000366815|H3-3A 6.298898537953694 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8656 47.277 146.0 634640.0 25 0 125370.0 + 31091 RLLEATSYL 9 83 533.3005190212798 1064.5864851093595 2 533.3007079958916 MULTI CID FTMS 0 0 0 8651 417005.4375 0.5070599501655941 -2 0.1298484802246093 5 Unmodified _RLLEATSYL_ ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A 31.26834338654808 0.1333407332142048 6 EATSY{I|L} 6 3 53.805 0.0 0.0 5.0541 0.0 0.0 382.2693653791032 0.0 382.2693653791032 0.0 40.61751581724352 0.0 0.0 0 0.8807196863200843 0.0 0.9247425010840048 0.0 + EATSY{I|L} 5.0541 + + 204 1 1.499 73659.8 1.0 3088 5566 8651 SUDHL4_400M_050219_2,8656 SUDHL4_400M_050219_2,8656,RLLEATSYL False True RLLEATSYL 47.277059 533.300707995892 8469917.0 8651.0 ENSG00000004487|ENST00000400181|KDM1A;;nc|ENSG00000004487|O60341|KDM1A 6.472664515177409 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8657 47.281 178.0 278570.0 25 0 31083.0 + -1 KMMDVTVTI 9 86 518.7691181396854 1035.5236833461706 2 519.2727538943291 MULTI CID FTMS 0 0 0 8651 211752.875 0.3588698000334291 -8 0.41314697265625 6 Carbamidomethyl (C),Oxidation (M) _LIM(Oxidation (M))NC(Carbamidomethyl (C))RTI_ ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;nc|ENSG00000185164|Q5JPE7|NOMO2 10.183394434864962 0.7604730176254005 6 T{I|L} 2 -1 21.211 0.0 0.0 2.0484 0.0 0.0 803.3809659162863 0.0 803.3809659162863 0.0 0.7660625688767198 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 T{I|L} 2.0484 + + 38 + 1 1.499 42532.7 1.0 3089 5566 8651 SUDHL4_400M_050219_2,8657 SUDHL4_400M_050219_2,8657,LIMNCRTI False False KMMDVTVTI 47.28053 519.272753894329 2861687.5 8651.0 ENSG00000185164|ENST00000622306|NOMO2;;ENSG00000103226|ENST00000399336|NOMO3;;nc|ENSG00000185164|Q5JPE7-3|NOMO2;;ENSG00000103512|ENST00000287667|NOMO1;;nc|ENSG00000185164|Q5JPE7|NOMO2 3.428378423055013 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8658 47.294 800.0 77247.0 25 0 8321.0 + 3341 AYNLKLRRF 9 86 590.8485268816911 1179.682500830182 2 590.8484374880791 MULTI CID FTMS 0 0 0 8651 122257.8125 0.9419963448206244 -2 0.1298484802246093 7 Unmodified _AYNLKLRRF_ REV__ENSG00000163104|ENST00000354268|SMARCAD1;REV__nc|ENSG00000163104|Q9H4L7-2|SMARCAD1;REV__nc|ENSG00000163104|Q9H4L7-3|SMARCAD1 2.059750862983233 0.8427793054688888 6 G 1 -1 2.7642 0.0 0.0 0.23432 0.0 0.0 569.3613684468258 550.2764376275999 1119.6378060744255 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.23432 - 24 + 1 1.499 50272.1 0.5199999809265137 3090 5566 8651 SUDHL4_400M_050219_2,8658 SUDHL4_400M_050219_2,8658,AYNLKLRRF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8659 47.308 800.0 77348.0 25 0 12209.0 + 26006 NLVNFRREK 9 88 588.334966526466 1174.655380119732 2 588.3361694216728 MULTI CID FTMS 0 0 0 8651 112698.796875 0.2878835677986849 11 -0.4598121643066406 8 Unmodified _NLVNFRREK_ REV__ENSG00000164512|ENST00000341048|ANKRD55;REV__nc|ENSG00000164512|Q3KP44-2|ANKRD55;REV__nc|ENSG00000164512|Q3KP44-3|ANKRD55 3.5964929083625545 0.7891324200061827 6 {I|L} 1 -1 10.089 0.0 0.0 0.85886 0.0 0.0 1043.56014804141 0.0 1043.56014804141 0.0 8.305907217233093 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.85886 + + 37 + 1 1.499 53531.9 0.5099999904632568 3091 5566 8651 SUDHL4_400M_050219_2,8659 SUDHL4_400M_050219_2,8659,NLVNFRREK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8660 47.314 332.0 418500.0 25 0 134200.0 -1 0 70 462.25158516880873 461.2443087022088 1 462.2514831423759 MULTI CID FTMS 0 0 0 8651 243092.46875 0.5436812706790775 -3 0.1473388671875 9 6 M 1 -1 15.485 0.0 0.0 3.3571 0.0 0.0 312.19318978306654 0.0 312.19318978306654 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 M 3.3571 - 9 + 1 1.499 112338.0 1.0 3092 5566 8651 SUDHL4_400M_050219_2,8660 SUDHL4_400M_050219_2,8660, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8662 47.319 9.6 5190800.0 25 0 541350.0 + -1 VMAPRTVLL 9 65 508.3018625351411 1014.5891721370822 2 508.3021728396416 MULTI CID FTMS 0 0 0 8661 2585060.75 0.43110959665767 -1 0.0659828186035156 1 Carbamidomethyl (C) _VLIWC(Carbamidomethyl (C))LVI_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;ENST00000498007.1_1_6:31324459-31324935:-|nuORF 24.20995872069341 0.5349487244130675 6 AD{I|L} 3 -1 40.445 0.0 0.0 3.9864 0.0 0.0 697.4476353675107 0.0 697.4476353675107 0.0 23.4556125503638 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 AD{I|L} 3.9864 - 60 1 1.499 41097.0 1.0 3093 5567 8661 SUDHL4_400M_050219_2,8662 SUDHL4_400M_050219_2,8662,VLIWCLVI False False VMAPRTVLL 47.319011 508.302172839642 72361168.0 8661.0 ENSG00000234745|ENST00000412585|HLA-B;;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;;ENST00000498007.1_1_6:31324459-31324935:-|nuORF 0.6796243190765381 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8663 47.322 173.0 248100.0 25 0 55559.0 40836 VLNFFLLSFPI 11 58 655.3819204895708 1308.7492880459415 2 655.3823119997978 MULTI CID FTMS 0 0 0 8661 203390.3125 0.4941433089924578 1 -0.0081787109375 2 Unmodified _VLNFFLLSFPI_ ENST00000591445.1_1_17:67501802-67515615:+|nuORF 1.1933415558491238 0.8695176722560516 6 S 1 10 1.1092 0.0 0.0 0.084756 0.0 0.0 846.5039400008228 372.2013033502563 1218.7052433510792 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + S 0.084756 + + 5 + 1 1.499 46161.7 1.0 3094 5567 8661 SUDHL4_400M_050219_2,8663 SUDHL4_400M_050219_2,8663,VLNFFLLSFPI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8665 47.329 197.0 336530.0 25 0 36564.0 -1 VMAPRTLLL 9 97 515.3092799717839 1028.6040070103677 2 515.3099243044853 MULTI CID FTMS 0 0 0 8664 277577.21875 0.666149319629274 -2 0.0741615295410156 1 Oxidation (M) _VM(Oxidation (M))APRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 29.84058131909904 0.1515068451768857 6 [{M(Oxidation (M))|F}V]A[TP]R{I|L}{I|L}{I|L} 9 -1 + 46.661 0.0 0.0 4.5363 4.5363 80.185 0.0 0.0 0.0 6.583624920952502 10.462659351691528 6.583624920952502 6.583624920952502 0 1.3807196863200843 0.0 0.0 0.0 [{M(Oxidation (M))|F}V]A[TP]R{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}{M(Oxidation (M))|F}[TP]R{I|L}{I|L}{I|L};{[MS]|[{M(Oxidation (M))|F}A]}V[TP]R{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}R{I|L}{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[VG]{I|L}{I|L}{I|L} 4.5363;3.8962;3.001;2.0563;1.1559 -;-;-;-;- 110 1 1.499 56896.2 1.0 3095 5568 8664 SUDHL4_400M_050219_2,8665 SUDHL4_400M_050219_2,8665,VMAPRTLLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8666 47.335 324.0 170220.0 25 0 28719.0 + 17119 KLGFTVTV 8 83 432.763242706013 863.511932478826 2 432.7629882693291 MULTI CID FTMS 0 0 0 8664 132649.984375 0.9825977082748356 2 -0.1218070983886718 2 Unmodified _KLGFTVTV_ ENSG00000134900|ENST00000376052|TPP2;nc|ENSG00000134900|P29144|TPP2;TPP2|p.Y1042Tfs*3|1|0.88|ENSG00000134900|chr13:102663664-102663667|ATTT/-|frameshift_variant 16.942295170755138 0.6606234159769251 6 VN[{I|L}T]TV 6 5 25.411 0.0 0.0 2.9428 0.0 0.0 218.131757773551 0.0 218.131757773551 0.0 23.42145952513228 0.0 0.0 0 0.4247425010840047 0.0 0.6549471895720985 0.0 VN[{I|L}T]TV 2.9428 - 38 + 1 1.499 49427.3 1.0 3096 5568 8664 SUDHL4_400M_050219_2,8666 SUDHL4_400M_050219_2,8666,KLGFTVTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8667 47.348 800.0 145620.0 25 0 19610.0 + 14976 ILQDEQYLM 9 135 584.780586267755 1167.54661960231 2 584.7805663943291 MULTI CID FTMS 0 0 0 8664 139378.859375 1.0 0 0.0 3 Oxidation (M) _ILQDEQYLM(Oxidation (M))_ ENSG00000119599|ENST00000358377|DCAF4;nc|ENSG00000119599|Q8WV16-2|DCAF4;nc|ENSG00000119599|Q8WV16-3|DCAF4;nc|ENSG00000119599|Q8WV16-4|DCAF4;nc|ENSG00000119599|Q8WV16-5|DCAF4 49.93300154707207 0.0405168250806675 6 {[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}{I|L}QY{I|L}{M(Oxidation (M))|F} 9 4 + 52.558 0.0 0.0 4.5016 4.5016 73.326 0.0 0.0 0.0 0.2155480697283849 22.12607267795065 0.2155480697283849 0.5799194697768684 0 2.274227503252014 0.0 0.555462187404089 0.8609243748081782 {[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}{I|L}QY{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}{I|L}QY{I|L}{M(Oxidation (M))|F};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}D{I|L}{I|L}QY{I|L}{M(Oxidation (M))|F};{I|L}{I|L}QDEQY{I|L}{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}E{I|L}Q{I|L}Y{I|L}{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}EQ{I|L}{I|L}Y{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q{I|L}Q{I|L}Y{I|L}{M(Oxidation (M))|F};{I|L}{I|L}AGDEQY{I|L}{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}QQ{I|L}{I|L}Y{I|L}{M(Oxidation (M))|F};{[QD]|[EN]|[WG]|[KD]|[RS]}EQY{I|L}{I|L}{I|L}{M(Oxidation (M))|F} 4.5016;4.4519;4.3655;4.2679;4.1126;4.0968;4.0629;4.0539;4.0471;3.9994 -;-;-;+;-;-;-;-;-;- + 2496 1 1.499 92189.7 0.550000011920929 3097 5568 8664 SUDHL4_400M_050219_2,8667 SUDHL4_400M_050219_2,8667,ILQDEQYLM True False ILQDEQYLM 47.348444 584.780566394329 807133.6875 8664.0 nc|ENSG00000119599|Q8WV16-2|DCAF4;;nc|ENSG00000119599|Q8WV16-5|DCAF4;;nc|ENSG00000119599|Q8WV16-3|DCAF4;;ENSG00000119599|ENST00000358377|DCAF4;;nc|ENSG00000119599|Q8WV16-4|DCAF4 6.046224435170491 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8668 47.362 800.0 105610.0 25 0 12366.0 + 24009 VIWDPDSVKTISA 13 101 715.8797797472137 1429.7450065612272 2 715.8811523318291 MULTI CID FTMS 0 0 0 8664 114737.78125 1.0 0 0.0 4 Unmodified _LVWYYCTLTIR_ ENSG00000092964|ENST00000521913|DPYSL2;nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2 20.41453444215458 0.6105011870913812 6 [{I|L}V]W{[CT]|[{M(Oxidation (M))|F}G]}S{I|L}TKVS 11 6 75.992 0.0 0.0 5.3151 0.0 0.0 0.0 209.05665002994377 209.05665002994377 25.77832488075949 0.0 0.0 0.0 0 0.75 2.0 1.5 0.3807196863200844 [{I|L}V]W{[CT]|[{M(Oxidation (M))|F}G]}S{I|L}TKVS 5.3151 - 3187 + 1 1.499 65245.3 0.5199999809265137 3098 5568 8664 SUDHL4_400M_050219_2,8668 SUDHL4_400M_050219_2,8668,LVWYYCTLTIR False False VIWDPDSVKTISA 47.362275 715.881152331829 586901.4375 8664.0 ENSG00000092964|ENST00000521913|DPYSL2;;nc|ENSG00000092964|Q16555-2|DPYSL2;;nc|ENSG00000092964|Q16555|DPYSL2 7.729287306467692 2.0 False 13.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8669 47.376 800.0 107740.0 25 0 18152.0 14990 ILRLYIDSI 9 116 553.3324036825737 1104.6502544319474 2 553.8347656130791 MULTI CID FTMS 0 0 0 8664 94207.625 1.0 0 0.0 5 Unmodified _ILRLYIDSI_ ENSG00000140534|ENST00000268138|TICRR;nc|ENSG00000140534|Q7Z2Z1-2|TICRR 8.593279151180031 0.6146971463335029 6 S{I|L} 2 7 12.648 0.0 0.0 1.145 0.0 0.0 886.5232230372193 0.0 886.5232230372193 0.0 1.7650934886127416 0.0 0.0 0 0.0 0.0 0.2215141619232908 0.0 + S{I|L} 1.145 + + 147 + 1 1.499 70144.6 0.4699999988079071 3099 5568 8664 SUDHL4_400M_050219_2,8669 SUDHL4_400M_050219_2,8669,ILRLYIDSI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8671 47.383 175.0 346760.0 25 0 60120.0 + -1 PGKVVCHRLR 10 72 611.3559653671452 1220.6973778010904 2 611.3559448122978 MULTI CID FTMS 0 0 0 8670 370065.03125 0.3125629107078115 14 -0.6418228149414062 1 Carbamidomethyl (C) _PGKVVC(Carbamidomethyl (C))HRLR_ REV__ENSG00000197603|ENST00000651892|CPLANE1;REV__nc|ENSG00000197603|Q9H799-5|CPLANE1;REV__nc|ENSG00000197603|Q9H799|CPLANE1 1.4819007175156935 0.719781833666733 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.499 49273.6 1.0 3100 5569 8670 SUDHL4_400M_050219_2,8671 SUDHL4_400M_050219_2,8671,PGKVVCHRLR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8672 47.397 800.0 100410.0 25 0 5726.7 + -1 FFFYCLFCFVI 11 84 781.8647414321855 1561.714929931171 2 781.8653442263603 MULTI CID FTMS 0 0 0 8670 79063.078125 0.9281198447079764 -1 0.0537185668945312 2 2 Carbamidomethyl (C) _FFFYC(Carbamidomethyl (C))LFC(Carbamidomethyl (C))FVI_ REV__ENSG00000164197|ENST00000389100|RNF180 3.5964929083625545 0.858179447565866 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQ[{I|L}V] 13 -1 + 83.977 0.0 0.0 5.3772 5.3772 78.029 0.0 0.0 0.0 1.6575559082039035 7.513580737957085 1.6575559082039035 1.6575559082039035 0 0.8494850021680094 1.5228787452803376 0.6989700043360187 1.8539171939081167 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQQNA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]QNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QGGA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QNA{M(Oxidation (M))|F}Y[AG][{I|L}V];[HD]EAQQGGA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EAQQNA{M(Oxidation (M))|F}Y[AG][{I|L}V];[HD]EAQ[AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];[HD]EA[AG]QNA{M(Oxidation (M))|F}YQ[{I|L}V] 5.3772;5.2711;5.0252;4.7963;4.7963;4.7963;4.6901;4.6901;4.6901;4.6901 -;-;-;-;-;-;-;-;-;- 1050 1 1.499 60981.4 0.4099999964237213 3101 5569 8670 SUDHL4_400M_050219_2,8672 SUDHL4_400M_050219_2,8672,FFFYCLFCFVI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8673 47.403 293.0 196060.0 25 0 30150.0 + 9617 FLLEKGYEV 9 77 549.2973153998608 1096.5800778665216 2 549.2974120974541 MULTI CID FTMS 0 0 0 8670 145823.65625 0.5445788152173976 -1 0.0537185668945312 3 Unmodified _FLLEKGYEV_ ENSG00000112699|ENST00000380815|GMDS;nc|ENSG00000112699|O60547-2|GMDS 29.081581746732265 0.1611639662936252 6 {[QN]|[E{I|L}]|[KN]}K[HS]E{I|L}{I|L}E 9 7 + 52.162 0.0 0.0 4.7568 4.7568 81.264 0.0 0.0 0.0 7.570320005642387 10.693788420849884 7.570320005642387 6.817496819840656 0 0.4247425010840047 0.9208187539523752 0.7614393726401688 0.0 {[QN]|[E{I|L}]|[KN]}K[HS]E{I|L}{I|L}E;{[QN]|[E{I|L}]|[KN]}KGY[{M(Oxidation (M))|F}V]{I|L}E;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}[HS]E{I|L}{I|L}E;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}GY[{M(Oxidation (M))|F}V]{I|L}E;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YG][{M(Oxidation (M))|F}V]{I|L}{I|L}E;[{I|L}T][VG][HS]E{I|L}{I|L}E;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[YG]{I|L}[{M(Oxidation (M))|F}V]{I|L}E;[{I|L}T][VG]GY[{M(Oxidation (M))|F}V]{I|L}E;{M(Oxidation (M))|F}{I|L}[{M(Oxidation (M))|F}V]Y{[NV]|[RG]}PV;{NN|[MP]|[D{I|L}]|[EV]}[KA]Y[{M(Oxidation (M))|F}V]{I|L}E 4.7568;4.1351;4.0665;3.4448;2.9783;2.8029;2.6311;2.1812;2.0363;1.9322 -;-;-;-;-;-;-;-;-;- 368 1 1.499 51078.9 1.0 3102 5569 8670 SUDHL4_400M_050219_2,8673 SUDHL4_400M_050219_2,8673,FLLEKGYEV False True FLLEKGYEV 47.402712 549.297412097454 1151165.75 8670.0 ENSG00000112699|ENST00000380815|GMDS;;nc|ENSG00000112699|O60547-2|GMDS 5.323411623636882 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8674 47.417 800.0 93103.0 25 0 11958.0 + 14975 ILQDEQYLM 9 105 576.7835520806893 1151.5525512281786 2 576.7843505740166 MULTI CID FTMS 0 0 0 8670 113631.640625 1.0 0 0.0 4 Unmodified _ILQDEQYLM_ ENSG00000119599|ENST00000358377|DCAF4;nc|ENSG00000119599|Q8WV16-2|DCAF4;nc|ENSG00000119599|Q8WV16-3|DCAF4;nc|ENSG00000119599|Q8WV16-4|DCAF4;nc|ENSG00000119599|Q8WV16-5|DCAF4 41.8396318013385 0.0653578398400075 6 {[DA]|[EG]}GEQ{I|L}{I|L}Y{I|L}M 10 6 + 57.813 0.0 0.0 5.0204 5.0204 75.44 0.0 0.0 0.0 4.285288126274423 10.452490459521968 4.285288126274423 0.8226467981605481 0 0.8182503180159344 0.8239087409443188 1.3996498648046138 0.2614393726401688 {[DA]|[EG]}GEQ{I|L}{I|L}Y{I|L}M;{[DA]|[EG]}GEQ{I|L}Y{I|L}{I|L}M;{[DA]|[EG]}GE{I|L}{I|L}QY{I|L}M;{I|L}{I|L}QDEQY{I|L}M;{[DA]|[EG]}GE{I|L}Q{I|L}Y{I|L}M;{[DA]|[EG]}GE{I|L}YQ{I|L}{I|L}M;{[DA]|[EG]}GE{I|L}QY{I|L}{I|L}M;[AG]DEQ{I|L}{I|L}Y{I|L}M;[AG]DEQ{I|L}Y{I|L}{I|L}M;[AG]DE{I|L}{I|L}QY{I|L}M 5.0204;4.949;4.9096;4.6483;4.4937;4.4926;4.4223;4.3986;4.3272;4.2879 -;-;-;+;-;-;-;-;-;- + 2201 1 1.499 61097.1 0.5 3103 5569 8670 SUDHL4_400M_050219_2,8674 SUDHL4_400M_050219_2,8674,ILQDEQYLM True True ILQDEQYLM 47.416544 576.784350574017 673181.125 8670.0 nc|ENSG00000119599|Q8WV16-2|DCAF4;;nc|ENSG00000119599|Q8WV16-5|DCAF4;;nc|ENSG00000119599|Q8WV16-3|DCAF4;;ENSG00000119599|ENST00000358377|DCAF4;;nc|ENSG00000119599|Q8WV16-4|DCAF4 4.892473538716634 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8675 47.43 800.0 178490.0 25 0 17533.0 + + 9397 ALSKEIYVI 9 146 518.3076499741393 1034.6007470150785 2 518.3074218630791 MULTI CID FTMS 0 0 0 8670 102992.8203125 0.81621135750847 -1 0.0537185668945312 5 Unmodified _FISSSVALVL_ ENSG00000116459|ENST00000369722|ATP5PB;ENST00000567330.1_1_16:75743035-75743521:-|nuORF 46.020951573049366 0.1035046897853725 6 [{I|L}A]G{[WT]|[RM]}{I|L}YV{I|L} 9 -1 + 57.857 0.0 0.0 5.5922 5.5922 80.053 0.0 0.0 0.0 2.4041570929963854 16.478174818886373 2.4041570929963854 2.4041570929963854 0 0.9247425010840048 1.5228787452803376 0.7059771852360797 0.0 [{I|L}A]G{[WT]|[RM]}{I|L}YV{I|L};{[QN]|[E{I|L}]|[KN]}[KS]A{I|L}YV{I|L};{[TV]|[{I|L}S]}T[VG]A{I|L}YV{I|L};[{I|L}A][KS]E{I|L}YV{I|L};{[TV]|[{I|L}S]}[KA]E{I|L}YV{I|L};[{I|L}A]G{[WT]|[RM]}Y{I|L}V{I|L};[{I|L}A]E[KS]{I|L}YV{I|L};{[QN]|[E{I|L}]|[KN]}[KS]AY{I|L}V{I|L};{[QN]|[E{I|L}]|[KN]}[KS]YA{I|L}V{I|L};{[TV]|[{I|L}S]}T[VG]AY{I|L}V{I|L} 5.5922;5.3599;5.3046;5.3013;5.2186;5.1311;5.0868;4.8987;4.8796;4.8434 -;-;-;-;-;-;-;-;-;- 1555 1 1.499 108729.4 0.449999988079071 3104 5569 8670 SUDHL4_400M_050219_2,8675 SUDHL4_400M_050219_2,8675,FISSSVALVL False False ALSKEIYVI 47.430377 518.307421863079 652964.375 8670.0 ENSG00000116459|ENST00000369722|ATP5PB;;ENST00000567330.1_1_16:75743035-75743521:-|nuORF 1.4668075094620387 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8676 47.444 800.0 111160.0 25 0 11736.0 + 14364 IEVREKSIL 9 100 543.829638761073 1085.644724588946 2 543.8298217654228 MULTI CID FTMS 0 0 0 8670 89618.53125 0.973181039415744 1 -0.0680885314941406 6 Unmodified _IEVREKSIL_ ENST00000581226.1_1_18:2694653-2697144:+|nuORF 32.30548876998284 0.1201446275138228 6 E{I|L}{I|L} 3 6 38.5 0.0 0.0 3.5463 0.0 0.0 712.424609389983 0.0 712.424609389983 0.0 21.05265951879793 0.0 0.0 0 0.9247425010840048 0.0 0.3054621874040891 0.0 E{I|L}{I|L} 3.5463 - 137 1 1.499 71039.2 0.4399999976158142 3105 5569 8670 SUDHL4_400M_050219_2,8676 SUDHL4_400M_050219_2,8676,IEVREKSIL True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8678 47.449 18.0 2371700.0 25 0 297380.0 + 41016 VMAPRTVLL 9 53 500.3043740301563 998.5941951271126 2 500.3047973513603 MULTI CID FTMS 0 0 0 8677 2875156.0 0.593028487852187 4 -0.1815986633300781 1 Unmodified _VMAPRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 22.736283301280096 0.2418982879461534 6 VMA 3 6 51.198 0.0 0.0 5.127 0.0 0.0 0.0 694.4237379167859 694.4237379167859 22.269987279362624 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + VMA 5.127 + + 30 + 1 1.499 37986.1 1.0 3106 5570 8677 SUDHL4_400M_050219_2,8678 SUDHL4_400M_050219_2,8678,VMAPRTVLL False True VMAPRTVLL 47.448995 500.30479735136 25316210.0 8677.0 ENSG00000234745|ENST00000412585|HLA-B;;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant;;ENST00000498007.1_1_6:31324459-31324935:-|nuORF -0.0077754855155944 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8679 47.458 537.0 164020.0 25 0 18118.0 7839 ELKSEREKL 9 114 566.322807910563 1130.631062887926 2 566.3221923708916 MULTI CID FTMS 0 0 0 8677 133205.5 0.4130612433168851 4 -0.1815986633300781 2 Unmodified _ELKSEREKL_ ENSG00000134318|ENST00000315872|ROCK2 3.2813086475875832 0.8001353427076754 6 {I|L} 1 8 11.259 0.0 0.0 0.99582 0.0 0.0 999.5361665029636 0.0 999.5361665029636 0.0 0.2899597348884342 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.99582 + + 53 + 1 1.499 68399.1 1.0 3107 5570 8677 SUDHL4_400M_050219_2,8679 SUDHL4_400M_050219_2,8679,ELKSEREKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8680 47.46 89.0 445080.0 25 0 90330.0 7668 EKKKTYIMKP 10 62 633.3691319727506 1264.723711012301 2 633.3693725466728 MULTI CID FTMS 0 0 0 8677 459693.90625 0.4302002383118183 -6 0.3258171081542969 3 Unmodified _EKKKTYIMKP_ ENST00000272793.9_1_2:170938445-170938493:+|nuORF 3.2813086475875832 0.7114585191678878 6 {I|L} 1 9 11.259 0.0 0.0 0.89024 0.0 0.0 1133.6291045443306 0.0 1133.6291045443306 0.0 11.259059864968997 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.89024 + + 3 + 1 1.499 38217.9 1.0 3108 5570 8677 SUDHL4_400M_050219_2,8680 SUDHL4_400M_050219_2,8680,EKKKTYIMKP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8681 47.469 500.0 157650.0 25 0 29742.0 13421 HLLYAVTKLPQ 11 99 641.8822565304728 1281.7499601277457 2 641.8827392458916 MULTI CID FTMS 0 0 0 8677 184658.296875 0.4527916838054861 -7 0.3433074951171875 4 Unmodified _HLLYAVTKLPQ_ ENSG00000114248|ENST00000316428|LRRC31;nc|ENSG00000114248|Q6UY01-2|LRRC31 2.9952420565917617 0.861016188266951 6 Q 1 10 11.265 0.0 0.0 0.87887 0.0 0.0 1135.6805306617282 0.0 1135.6805306617282 0.0 2.770097617358529 0.0 0.0 0 0.0 0.0 0.0 0.0669015600442578 + Q 0.87887 + + 16 + 1 1.499 67250.9 1.0 3109 5570 8677 SUDHL4_400M_050219_2,8681 SUDHL4_400M_050219_2,8681,HLLYAVTKLPQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8682 47.483 800.0 68808.0 25 0 4456.2 + -1 ATVVVLCVRF 10 94 582.3350249375534 1162.655496941907 2 582.3355590701103 MULTI CID FTMS 0 0 0 8677 144743.15625 0.6916577679214209 4 -0.1815986633300781 5 Carbamidomethyl (C) _ATVVVLC(Carbamidomethyl (C))VRF_ REV__ENSG00000148841|ENST00000337478|ITPRIP 6.2057823575117 0.6979311171683138 6 Y 1 -1 12.474 0.0 0.0 1.0729 0.0 0.0 981.5814745803816 0.0 981.5814745803816 0.0 0.6456950381075757 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 1.0729 - 30 + 1 1.499 47496.8 0.5699999928474426 3110 5570 8677 SUDHL4_400M_050219_2,8682 SUDHL4_400M_050219_2,8682,ATVVVLCVRF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8683 47.489 334.0 251700.0 25 0 33838.0 23896 LVLYHLSV 8 77 472.2826293138011 942.5507056944024 2 472.2830993533134 MULTI CID FTMS 0 0 0 8677 151361.34375 0.2216077436109307 -3 0.1299858093261718 6 Unmodified _LVLYHLSV_ ENSG00000112511|ENST00000374516|PHF1;nc|ENSG00000112511|O43189-2|PHF1 42.96799951952854 0.1846367511955703 6 A{I|L}{I|L}SV 5 4 51.013 0.0 0.0 5.4123 0.0 0.0 441.2336867784574 0.0 441.2336867784574 0.0 28.33735964571133 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 A{I|L}{I|L}SV 5.4123 - 156 1 1.499 72521.0 1.0 3111 5570 8677 SUDHL4_400M_050219_2,8683 SUDHL4_400M_050219_2,8683,LVLYHLSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8684 47.5 600.0 158990.0 25 0 18739.0 + 31551 RQLEEEGITFV 11 85 660.8430122449245 1319.6714715566488 2 660.8436157107353 MULTI CID FTMS 0 0 0 8677 117161.5859375 1.0 0 0.0 7 Unmodified _RQLEEEGITFV_ ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 37.77132515983256 0.2467275698964582 6 [Y{I|L}][H{I|L}]EEG{I|L}T{M(Oxidation (M))|F}V 11 3 + 73.186 0.0 0.0 5.5457 5.5457 90.532 0.0 0.0 0.0 8.016803959061193 63.45358838861056 8.016803959061193 22.557809497117816 0 1.2396518287104437 1.3010299956639813 0.8807196863200843 0.0 [Y{I|L}][H{I|L}]EEG{I|L}T{M(Oxidation (M))|F}V;[Y{I|L}][H{I|L}]ET[TP]T{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}T]HH[YV]G{I|L}T{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}T][YV]HHG{I|L}T{M(Oxidation (M))|F}V;[Y{I|L}][H{I|L}]ET{[VA]|[{I|L}G]}E{M(Oxidation (M))|F}V;[{M(Oxidation (M))|F}T]HH[YR]{I|L}T{M(Oxidation (M))|F}V;[VP][WQ]HHG{I|L}T{M(Oxidation (M))|F}V;[VP]GEQ[{M(Oxidation (M))|F}V][TP]T{M(Oxidation (M))|F}V;[VP]GEQ[{M(Oxidation (M))|F}V]{[VA]|[{I|L}G]}E{M(Oxidation (M))|F}V 5.5457;3.8364;3.5352;3.4618;3.2294;3.0369;2.8505;2.5942;1.9872 -;-;-;-;-;-;-;-;- 713 1 1.499 78895.2 1.0 3112 5570 8677 SUDHL4_400M_050219_2,8684 SUDHL4_400M_050219_2,8684,RQLEEEGITFV False True RQLEEEGITFV 47.499658 660.843615710735 810823.625 8677.0 nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;nc|ENSG00000129657|Q92503-3|SEC14L1 7.089770634969075 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8685 47.509 518.0 96313.0 25 0 11406.0 15804 ISFLHFFL 8 90 512.2873777809242 1022.5602026286484 2 512.2892944216728 MULTI CID FTMS 0 0 0 8677 115926.4609375 1.0 0 0.0 8 Unmodified _ISFLHFFL_ ENST00000219281.7_1_16:58054964-58055177:+|nuORF 20.871210003555333 0.6025813472596342 6 [{I|L}T][NP]S 5 7 14.705 0.0 0.0 1.4381 0.0 0.0 0.0 507.2658050058547 507.2658050058547 0.1009061466849203 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.2742275032520141 0.0 [{I|L}T][NP]S 1.4381 - 194 1 1.499 43764.2 1.0 3113 5570 8677 SUDHL4_400M_050219_2,8685 SUDHL4_400M_050219_2,8685,ISFLHFFL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8687 47.527 800.0 54040.0 25 0 16073.0 + 10266 FQVKLLYRMR 10 65 677.3950512041706 1352.7755494751411 2 677.3951293826103 MULTI CID FTMS 0 0 0 8686 83687.9375 0.2913868964498207 -11 0.52911376953125 1 Unmodified _FQVKLLYRMR_ REV__ENSG00000129484|ENST00000429687|PARP2;REV__nc|ENSG00000129484|Q9UGN5|PARP2 0.4007161486938917 0.7247829448918255 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.499 44236.7 0.4900000095367431 3114 5571 8686 SUDHL4_400M_050219_2,8687 SUDHL4_400M_050219_2,8687,FQVKLLYRMR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8688 47.528 84.0 619840.0 25 0 42373.0 + 9700 FLSNDTVQL 9 81 518.7691181396854 1035.5236833461706 2 518.7691528201103 MULTI CID FTMS 0 0 0 8686 444774.15625 0.3960651704423645 -2 0.1326751708984375 2 Unmodified _FLSNDTVQL_ ENSG00000012124|ENST00000085219|CD22;nc|ENSG00000012124|P20273-2|CD22;nc|ENSG00000012124|P20273-3|CD22;nc|ENSG00000012124|P20273-4|CD22;nc|ENSG00000012124|P20273-5|CD22 39.957323273325 0.0756908302845263 6 {[TV]|[{I|L}S]}[DN]{M(Oxidation (M))|F}T 6 5 25.195 0.0 0.0 2.433 0.0 0.0 0.0 355.1993324741947 355.1993324741947 5.246134210770919 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.7742275032520141 0.3807196863200844 {[TV]|[{I|L}S]}[DN]{M(Oxidation (M))|F}T 2.433 - 96 1 1.499 46525.2 1.0 3115 5571 8686 SUDHL4_400M_050219_2,8688 SUDHL4_400M_050219_2,8688,FLSNDTVQL True True FLSNDTVQL 47.528405 518.76915282011 10912117.0 8686.0 nc|ENSG00000012124|P20273-2|CD22;;nc|ENSG00000012124|P20273-3|CD22;;ENSG00000012124|ENST00000085219|CD22;;nc|ENSG00000012124|P20273-4|CD22;;nc|ENSG00000012124|P20273-5|CD22 5.52377192179362 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8689 47.532 180.0 404690.0 25 0 97470.0 + 42602 VTRRLETL 8 69 494.3009812633785 986.5874095935568 2 494.3009826540947 MULTI CID FTMS 0 0 0 8686 298429.84375 0.1647009832987193 -3 0.1863937377929687 3 Unmodified _VTRRLETL_ REV__ENSG00000111057|ENST00000388835|KRT18;REV__ENST00000397031.2_1_2:182825941-182826409:-|nuORF;REV__ENST00000549078.5_1_12:53344429-53346127:+|nuORF 0.7936320650641473 0.8195151834710337 6 {I|L} 1 -1 11.42 0.0 0.0 1.1575 0.0 0.0 855.4925589849616 0.0 855.4925589849616 0.0 9.82618946870394 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.1575 + + 3 + 1 1.499 60521.6 1.0 3116 5571 8686 SUDHL4_400M_050219_2,8689 SUDHL4_400M_050219_2,8689,VTRRLETL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8690 47.541 509.0 234080.0 25 0 49408.0 + 14901 ILLFFGVPV 9 120 502.8142357664743 1003.6139185997486 2 502.8139221072197 MULTI CID FTMS 0 0 0 8686 149837.4375 0.1788190953274597 -4 0.1945724487304687 4 Unmodified _ILLFFGVPV_ REV__ENSG00000011638|ENST00000233047|LDAF1;REV__nc|ENSG00000011638|Q96B96-2|LDAF1 5.230669730166228 0.7320841359114558 6 {I|L} 1 -1 9.9148 0.0 0.0 0.98791 0.0 0.0 872.5188848856845 0.0 872.5188848856845 0.0 0.7661418804808839 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.98791 + + 44 + 1 1.499 92929.4 1.0 3117 5571 8686 SUDHL4_400M_050219_2,8690 SUDHL4_400M_050219_2,8690,ILLFFGVPV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8691 47.553 715.0 125130.0 25 0 11303.0 + 36957 TFAISSALKG 10 116 497.7804916650166 993.5464303968332 2 497.7823669314384 MULTI CID FTMS 0 0 0 8686 101452.375 1.0 0 0.0 5 Unmodified _TFAISSALKG_ REV__ENSG00000172915|ENST00000379939|NBEA;REV__ENST00000497540.1_1_13:35644101-35644990:+|nuORF;REV__nc|ENSG00000172915|Q8NFP9|NBEA 27.628801355627647 0.3479284626772844 6 [TA]{M(Oxidation (M))|F}{I|L}GS{I|L}TGK 10 -1 + 65.485 0.0 0.0 6.591 6.591 85.329 0.0 0.0 0.0 22.67606240177032 4.57473289655335 4.57473289655335 4.57473289655335 0 0.75 1.6989700043360187 0.6203715150305281 0.0 [TA]{M(Oxidation (M))|F}{I|L}GS{I|L}TGK;[TA]{M(Oxidation (M))|F}{I|L}GS[KA]S{I|L};[TA]{M(Oxidation (M))|F}{I|L}GS[KA]TV;[TA]{M(Oxidation (M))|F}{I|L}GS[KT]G{I|L};[TA]{M(Oxidation (M))|F}{I|L}GS[KT]AV;[TA]{M(Oxidation (M))|F}{I|L}G[Y{I|L}]P{I|L};[KG][YR]G{I|L}{M(Oxidation (M))|F}[PG] 6.591;6.1306;6.0429;5.2424;5.1547;4.6339;1.9621 -;-;-;-;-;-;- 250 + 1 1.499 73067.2 1.0 3118 5571 8686 SUDHL4_400M_050219_2,8691 SUDHL4_400M_050219_2,8691,TFAISSALKG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8693 47.566 565.0 145500.0 25 0 21962.0 + 31092 RLLEATSYL 9 92 533.3005190212798 1064.5864851093595 2 533.3006469607353 MULTI CID FTMS 0 0 0 8692 105580.390625 0.1283810300645695 4 -0.1507110595703125 1 Unmodified _RLLEATSYL_ ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A 31.26834338654808 0.1333407332142048 6 {I|L}{I|L}REATSY{I|L} 9 2 + 62.406 0.0 0.0 5.862 5.862 92.604 0.0 0.0 0.0 9.665762445130497 56.92139399289715 9.665762445130497 47.048734808312034 0 0.8807196863200843 1.0 0.8807196863200843 0.0 {I|L}{I|L}REATSY{I|L};{I|L}{I|L}RE[PG][HM]{I|L} 5.862;1.4426 -;- 167 1 1.499 66435.3 1.0 3119 5572 8692 SUDHL4_400M_050219_2,8693 SUDHL4_400M_050219_2,8693,RLLEATSYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8694 47.574 452.0 157590.0 25 0 18270.0 + 37256 TIMPKDIQL 9 113 537.7968008239055 1073.579048714611 2 537.7966186404228 MULTI CID FTMS 0 0 0 8692 165434.125 0.1480586800906292 4 -0.1507110595703125 2 Oxidation (M) _TIM(Oxidation (M))PKDIQL_ ENSG00000132475|ENST00000254810|H3-3B;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000168148|ENST00000366696|H3-4;ENSG00000183598|ENST00000331491|H3C13;ENSG00000188375|ENST00000340398|H3-5;ENSG00000197153|ENST00000359303|H3C12;ENSG00000197409|ENST00000356476|H3C4;ENSG00000203811|ENST00000369158|H3C14;ENSG00000203852|ENST00000403683|H3C15;ENSG00000273983|ENST00000614378|H3C8;ENSG00000274750|ENST00000614911|H3C6;ENSG00000275379|ENST00000616365|H3C11;ENSG00000275714|ENST00000613854|H3C1;ENSG00000277775|ENST00000618052|H3C7;ENSG00000278828|ENST00000685041|H3C10;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENST00000404612.1_1_6:26322106-26322214:-|nuORF;ENST00000593254.1_1_17:73774678-73775846:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7 49.55428908609986 0.0413471690215031 6 {[QN]|[E{I|L}]|[KN]}[H{I|L}]QPPQ{I|L} 9 6 + 50.714 0.0 0.0 4.7238 4.7238 79.475 0.0 0.0 0.0 15.78316113020248 11.773467196501372 11.773467196501372 4.836492204174249 0 0.9247425010840048 1.6989700043360187 0.0 1.2134679910804405 {[QN]|[E{I|L}]|[KN]}[H{I|L}]QPPQ{I|L};[{I|L}T]AAP{M(Oxidation (M))|F}T{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}NM{I|L}T{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[H{I|L}][AG]PPQ{I|L};{[QN]|[E{I|L}]|[KN]}[H{I|L}]QPP[AG]{I|L};[{I|L}T]AAPQ[{I|L}T]{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}GGM{I|L}T{I|L}Q{I|L};[{I|L}T]{[CA]|SS}{I|L}{[ES]|[DT]|[{I|L}C]}PQ{I|L};[{I|L}T]{M(Oxidation (M))|F}P{[NV]|[RG]}[{I|L}A]S{I|L};[{I|L}T]{[WT]|[RM]}{[ES]|[DT]|[{I|L}C]}PQ{I|L} 4.7238;4.2733;4.2463;3.8661;3.4704;3.404;3.3886;3.3406;3.2438;3.0125 -;-;-;-;-;-;-;-;-;- 1213 + 1 1.499 59056.4 1.0 3120 5572 8692 SUDHL4_400M_050219_2,8694 SUDHL4_400M_050219_2,8694,TIMPKDIQL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8695 47.581 430.0 132150.0 25 0 14246.0 + 9602 FLLDHGASL 9 96 486.761183071639 971.507813210078 2 486.7611572146416 MULTI CID FTMS 0 0 0 8692 110264.0 1.0 0 0.0 3 Unmodified _FLLDHGASL_ ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000151150|Q12955-4|ANK3;nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-7|ANK3 21.74664581756881 0.2544899275067181 6 SAG{M(Oxidation (M))|F}S{I|L} 6 6 25.851 0.0 0.0 2.661 0.0 0.0 391.2495257118342 0.0 391.2495257118342 0.0 2.8925875426909187 0.0 0.0 0 0.0 0.0 0.5752574989159953 0.0 SAG{M(Oxidation (M))|F}S{I|L} 2.661 - 248 + 1 1.499 49247.0 1.0 3121 5572 8692 SUDHL4_400M_050219_2,8695 SUDHL4_400M_050219_2,8695,FLLDHGASL False True FLLDHGASL 47.581399 486.761157214642 615618.5 8692.0 nc|ENSG00000151150|Q12955-4|ANK3;;ENSG00000151150|ENST00000280772|ANK3;;nc|ENSG00000151150|Q12955-7|ANK3;;nc|ENSG00000151150|Q12955-5|ANK3 1.985234498977661 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8697 47.586 38.0 1194400.0 25 0 126950.0 -1 VLIWCLVI 8 73 508.3018625351411 1014.5891721370822 2 508.3021423220634 MULTI CID FTMS 0 0 0 8696 1335518.0 0.2227238281765943 5 -0.2051239013671875 1 Carbamidomethyl (C) _VLIWC(Carbamidomethyl (C))LVI_ ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR 32.45364647766026 0.3613649037604678 6 AD{I|L} 3 -1 40.005 0.0 0.0 3.943 0.0 0.0 697.4489633035901 0.0 697.4489633035901 0.0 23.015384402724592 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.0 AD{I|L} 3.943 - 35 1 1.499 38803.0 1.0 3122 5573 8696 SUDHL4_400M_050219_2,8697 SUDHL4_400M_050219_2,8697,VLIWCLVI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8698 47.595 527.0 118100.0 25 0 24214.0 + 29885 QRNPRIKNRQ 10 73 655.3819204895708 1308.7492880459415 2 655.3825561404228 MULTI CID FTMS 0 0 0 8696 113787.4765625 0.2764503358069007 7 -0.2593955993652344 2 Unmodified _QRNPRIKNRQ_ REV__ENSG00000128276|ENST00000249007|RFPL3;REV__nc|ENSG00000128276|O75679-2|RFPL3 1.6526216038709556 0.7189921496796233 6 A 1 -1 4.6041 0.0 0.0 0.35179 0.0 0.0 909.5553316023852 325.1279696100219 1234.6833012124073 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.35179 - 3 + 1 1.499 59821.3 1.0 3123 5573 8696 SUDHL4_400M_050219_2,8698 SUDHL4_400M_050219_2,8698,QRNPRIKNRQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8699 47.601 277.0 298070.0 25 0 25985.0 + 17189 KLLDFSTRI 9 105 546.82439053364 1091.63422813408 2 546.8237182497978 MULTI CID FTMS 0 0 0 8696 150847.546875 0.4827766006761902 -4 0.2052841186523437 3 Unmodified _KLLDFSTRI_ ENST00000521797.1_1_5:162884004-162884578:-|nuORF 42.312485326615175 0.0627620958981271 6 K{I|L}{I|L}D{M(Oxidation (M))|F}{[MG]|[TS]}R{I|L} 9 0 + 66.208 0.0 0.0 6.065 6.065 86.455 0.0 0.0 0.0 53.44384663176459 7.1400125535309655 7.1400125535309655 8.010299956639813 0 2.0356668758921828 0.0 0.4247425010840047 0.0 + + K{I|L}{I|L}D{M(Oxidation (M))|F}{[MG]|[TS]}R{I|L};{I|L}K{I|L}D{M(Oxidation (M))|F}{[MG]|[TS]}R{I|L} 6.065;5.3313 +;- + 291 + 1 1.499 68612.6 1.0 3124 5573 8696 SUDHL4_400M_050219_2,8699 SUDHL4_400M_050219_2,8699,KLLDFSTRI True True KLLDFSTRI 47.60058 546.823718249798 1466568.125 8696.0 ENST00000521797.1_1_5:162884004-162884578:-|nuORF 4.592930237452189 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8700 47.613 726.0 140920.0 25 0 18888.0 + 35899 SVMRLTISY 9 136 543.2855971126892 1084.5566412921785 2 543.2855102419853 MULTI CID FTMS 0 0 0 8696 99345.734375 1.0 0 0.0 4 Oxidation (M) _SVM(Oxidation (M))RLTISY_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 40.23920728925047 0.0741434193262949 6 {I|L}T{I|L}SY 5 4 45.93 0.0 0.0 4.2349 0.0 0.0 489.2363453595719 0.0 489.2363453595719 0.0 34.14712604119521 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 + {I|L}T{I|L}SY 4.2349 + + 490 1 1.499 81999.0 1.0 3125 5573 8696 SUDHL4_400M_050219_2,8700 SUDHL4_400M_050219_2,8700,SVMRLTISY True False SVMRLTISY 47.61317 543.285510241985 480866.5 8696.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 6.302054087320964 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8701 47.624 621.0 134930.0 25 0 12997.0 + 14622 IIIGQESITY 10 118 568.8136744779395 1135.6127960226788 2 568.8140746951103 MULTI CID FTMS 0 0 0 8696 99796.453125 0.3313039175155058 -3 0.1371955871582031 5 Unmodified _IIIGQESITY_ ENSG00000167986|ENST00000301764|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61091835-61095006:-|nuORF 36.12702656103203 0.1984647928738587 6 {I|L}{I|L}{I|L}[DV]TY 7 5 29.825 0.0 0.0 2.6264 0.0 0.0 300.13697922756006 0.0 300.13697922756006 0.0 2.870156338638594 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 {I|L}{I|L}{I|L}[DV]TY 2.6264 - 666 + 1 1.499 67651.2 1.0 3126 5573 8696 SUDHL4_400M_050219_2,8701 SUDHL4_400M_050219_2,8701,IIIGQESITY False True IIIGQESITY 47.624013 568.81407469511 1712330.875 8696.0 ENSG00000167986|ENST00000301764|DDB1;;ENST00000545930.5_1_11:61091835-61095006:-|nuORF;;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;;ENST00000537120.5_1_11:61091345-61100440:-|nuORF 4.503352801005046 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8702 47.626 78.0 790590.0 25 0 276940.0 -1 0 30 627.3670565088539 626.3597800422539 1 627.3673583865166 MULTI CID FTMS 0 0 0 8696 827737.875 1.0 0 0.0 6 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.499 52308.0 1.0 3127 5573 8696 SUDHL4_400M_050219_2,8702 SUDHL4_400M_050219_2,8702, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8704 47.633 145.0 395990.0 25 0 63075.0 + 43639 YALSKRRTQP 10 53 610.3480301087018 1218.6815072842037 2 610.3483154177666 MULTI CID FTMS 0 0 0 8703 353190.4375 1.0 0 0.0 1 Unmodified _YALSKRRTQP_ REV__ENST00000285689.7_2_5:125759302-125805397:+|nuORF;REV__ENST00000544396.5_2_5:125759302-125807964:+|nuORF;REV__nc|ENSG00000155324|Q96HH9-2|GRAMD2B 1.6526216038709556 0.7189921496796233 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.499 46800.5 1.0 3128 5574 8703 SUDHL4_400M_050219_2,8704 SUDHL4_400M_050219_2,8704,YALSKRRTQP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8705 47.646 800.0 94680.0 25 0 4803.1 + -1 QIAEGMAYI 9 91 1011.4712724375544 3031.3919879128634 3 1011.807177722454 MULTI CID FTMS 0 0 0 8703 69186.625 0.6311396676440333 1 -0.0371742248535156 2 ENST00000526097.1_1_8:11418120-11421614:+|nuORF;ENSG00000136573|ENST00000259089|BLK;ENSG00000254087|ENST00000519728|LYN;nc|ENSG00000254087|P07948-2|LYN;chr8:11558054-11561302|17|10.24|0.18|5.83|+|0|BLK,BLK|2 6 {I|L}YNVVE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 -1 40.258 0.0 0.0 1.328 0.0 0.0 2038.931100457575 0.0 2038.931100457575 0.0 25.56479076621045 0.0 0.0 0 0.5 0.0 1.329689690656103 1.1861818737241734 {I|L}YNVVE{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 1.328 - 2058 + 1 1.499 60400.9 0.449999988079071 3129 5574 8703 SUDHL4_400M_050219_2,8705 SUDHL4_400M_050219_2,8705, False False QIAEGMAYI 47.64644 1011.80717772245 666192.9375 8703.0 ENST00000526097.1_1_8:11418120-11421614:+|nuORF;;ENSG00000136573|ENST00000259089|BLK;;ENSG00000254087|ENST00000519728|LYN;;nc|ENSG00000254087|P07948-2|LYN;;chr8:11558054-11561302|17|10.24|0.18|5.83|+|0|BLK,BLK|2 0.7997609476248423 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8706 47.65 197.0 255040.0 25 0 18717.0 -1 VMAPRTLLL 9 87 515.3092799717839 1028.6040070103677 2 515.3098632693291 MULTI CID FTMS 0 0 0 8703 135481.8125 0.3251387762491437 4 -0.1607208251953125 3 Oxidation (M) _VM(Oxidation (M))APRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 17.11289562659939 0.3734572693229295 6 AD{I|L} 3 -1 32.435 0.0 0.0 3.1533 0.0 0.0 711.4657375699538 0.0 711.4657375699538 0.0 12.513487579716765 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 AD{I|L} 3.1533 - 112 1 1.499 45070.8 1.0 3130 5574 8703 SUDHL4_400M_050219_2,8706 SUDHL4_400M_050219_2,8706,VMAPRTLLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8707 47.663 735.0 135980.0 25 0 32316.0 -1 LLTIKCLLI 9 112 543.8531597936518 1085.6917666541035 2 543.8529540896416 MULTI CID FTMS 0 0 0 8703 98600.234375 0.9247651877380684 -1 0.044403076171875 4 Carbamidomethyl (C) _LLTIKC(Carbamidomethyl (C))LLI_ ENSG00000108106|ENST00000264552|UBE2S 5.230669730166228 0.7320841359114558 6 {I|L}{I|L}[WM]T 5 -1 19.934 0.0 0.0 1.836 0.0 0.0 0.0 438.335662488341 438.335662488341 1.974987195809419 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.4247425010840047 0.0 {I|L}{I|L}[WM]T 1.836 - 119 1 1.499 78308.7 1.0 3131 5574 8703 SUDHL4_400M_050219_2,8707 SUDHL4_400M_050219_2,8707,LLTIKCLLI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8709 47.676 618.0 131430.0 25 0 13587.0 + 44325 RITNQVIYL 9 96 560.3302492703225 1118.645945607445 2 560.3305541872978 MULTI CID FTMS 0 0 0 8708 94288.9140625 0.8593302197842493 -1 0.0371742248535156 1 Unmodified _YLPKLELML_ ENSG00000197102|ENST00000360184|DYNC1H1 21.74664581756881 0.2544899275067181 6 [Q{I|L}]N[VS]AV{I|L}Y{I|L} 10 7 + 53.65 0.0 0.0 4.796 4.796 80.74 0.0 0.0 0.0 6.03286222516239 15.026975159433526 6.03286222516239 6.03286222516239 0 0.805462187404089 1.0457574905606752 0.0 0.2742275032520141 [Q{I|L}]N[VS]AV{I|L}Y{I|L};[Y{I|L}]A{[HG]|PP}AV{I|L}Y{I|L};[Y{I|L}]A[HK]V{I|L}Y{I|L};[Q{I|L}]GG[VS]AV{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}[W{I|L}]AV{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}D[{I|L}A]AV{I|L}Y{I|L};{[QN]|[E{I|L}]|[KN]}D[RV]V{I|L}Y{I|L} 4.796;4.2567;4.211;3.9767;3.4755;3.2522;3.2064 -;-;-;-;-;-;- 313 1 1.499 64645.6 1.0 3132 5575 8708 SUDHL4_400M_050219_2,8709 SUDHL4_400M_050219_2,8709,YLPKLELML False False RITNQVIYL 47.676315 560.330554187298 820596.375 8708.0 ENSG00000197102|ENST00000360184|DYNC1H1 4.731392542521159 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8710 47.69 800.0 189250.0 25 0 10389.0 + 39660 RLYDPASGTISL 12 109 646.8458769140857 1291.6772008949713 2 646.8468505740166 MULTI CID FTMS 0 0 0 8708 94306.34375 0.3632715253934103 -3 0.109710693359375 2 Unmodified _VEDFREGKLSL_ ENSG00000135776|ENST00000344517|ABCB10 55.23464941255904 0.0886405999673349 6 {[TV]|[{I|L}S]}T[{M(Oxidation (M))|F}V]PASGT{I|L}S{I|L} 13 7 + 93.695 0.0 0.0 7.2538 7.2538 83.552 0.0 0.0 0.0 7.875983906059929 13.363754100008592 7.875983906059929 1.7609125905568137 0 1.424742501084005 1.5228787452803376 2.3065533887547014 0.0 {[TV]|[{I|L}S]}T[{M(Oxidation (M))|F}V]PASGT{I|L}S{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}PASGT{I|L}S{I|L};[{I|L}T]S[{M(Oxidation (M))|F}V]PASGT{I|L}S{I|L};[{I|L}T][W{M(Oxidation (M))|F}]PASGT{I|L}S{I|L};{[TV]|[{I|L}S]}{I|L}K[C(Carbamidomethyl (C))N]SGT{I|L}S{I|L};{[TV]|[{I|L}S]}T[RV]MDGT{I|L}S{I|L};{[TV]|[{I|L}S]}T[{M(Oxidation (M))|F}V]PASGG{I|L}M{I|L};{[TV]|[{I|L}S]}{I|L}KW[EC]T{I|L}S{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}PASGG{I|L}M{I|L};{[TV]|[{I|L}S]}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NDGT{I|L}S{I|L} 7.2538;7.1174;6.644;6.5959;6.1894;5.8597;5.7814;5.6776;5.645;5.587 -;-;-;-;-;-;-;-;-;- 4041 1 1.499 122016.2 0.4699999988079071 3133 5575 8708 SUDHL4_400M_050219_2,8710 SUDHL4_400M_050219_2,8710,VEDFREGKLSL True False RLYDPASGTISL 47.690152 646.846 1743821.25 8708.0 ENSG00000135776|ENST00000344517|ABCB10 7.1081803639729815 2.0 False 12.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8711 47.704 800.0 114970.0 25 0 12440.0 -1 0 83 764.3836774402292 763.3764009736292 1 764.3879882693291 MULTI CID FTMS 0 0 0 8708 81517.7578125 0.8077778283561152 -2 0.0815773010253906 3 6 EE{M(Oxidation (M))|F}VQ{I|L} 6 -1 + 58.403 0.0 0.0 7.6506 7.6506 93.49 0.0 0.0 0.0 17.75974424940685 16.197887582883936 16.197887582883936 9.420080530223132 0 1.2059771852360797 0.0 1.4916440611282626 0.0 EE{M(Oxidation (M))|F}VQ{I|L};EE{M(Oxidation (M))|F}V[AG]{I|L};EE{M(Oxidation (M))|F}QV{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}EQ{I|L};EE{M(Oxidation (M))|F}[AG]V{I|L};[{M(Oxidation (M))|F}V]EEQ{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}E[AG]{I|L};{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}QE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}EE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}Q{I|L} 7.6506;6.4166;5.9595;5.3241;4.3473;4.3255;4.0901;3.6498;3.4908;3.1792 -;-;-;-;-;-;-;-;-;- 216 1 1.499 74139.1 0.4199999868869781 3134 5575 8708 SUDHL4_400M_050219_2,8711 SUDHL4_400M_050219_2,8711, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8714 47.713 55.0 680070.0 25 0 157520.0 + 8255 EQHKQRRKR 9 56 633.3691319727506 1264.723711012301 2 633.3693725466728 MULTI CID FTMS 0 0 0 8713 978985.5 0.9161744144913052 1 -0.0784759521484375 1 Unmodified _EQHKQRRKR_ REV__ENSG00000080503|ENST00000349721|SMARCA2;REV__ENSG00000127616|ENST00000344626|SMARCA4;REV__nc|ENSG00000080503|P51531-2|SMARCA2;REV__nc|ENSG00000127616|P51532-2|SMARCA4;REV__nc|ENSG00000127616|P51532-3|SMARCA4;REV__nc|ENSG00000127616|P51532-4|SMARCA4;REV__nc|ENSG00000127616|P51532-5|SMARCA4 0.4583401331227399 0.8986837419108351 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.499 36487.5 1.0 3135 5577 8713 SUDHL4_400M_050219_2,8714 SUDHL4_400M_050219_2,8714,EQHKQRRKR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8715 47.719 320.0 118360.0 25 0 18332.0 -1 VMGKIFAV 8 77 440.75166412677737 879.4887753203548 2 440.7517578005791 MULTI CID FTMS 0 0 0 8713 156668.171875 0.3517961994025323 -3 0.082244873046875 2 Oxidation (M) _VM(Oxidation (M))GKIFAV_ ENSG00000145332|ENST00000273963|KLHL8;nc|ENSG00000145332|Q9P2G9-2|KLHL8 22.4526382665184 0.5719518724627818 6 {M(Oxidation (M))|F} 1 -1 16.99 0.0 0.0 1.9318 0.0 0.0 714.4095649705486 0.0 714.4095649705486 0.0 -3.187587626244124 -3.187587626244124 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.9318 + + 35 + 1 1.499 37338.5 1.0 3136 5577 8713 SUDHL4_400M_050219_2,8715 SUDHL4_400M_050219_2,8715,VMGKIFAV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8716 47.732 800.0 168920.0 25 0 10835.0 + -1 KAMGIMNSF 9 174 515.7388023134326 1029.4630516936652 2 515.7392455935478 MULTI CID FTMS 0 0 0 8713 125192.234375 1.0 0 0.0 3 2 Oxidation (M) _KAM(Oxidation (M))GIM(Oxidation (M))NSF_ ENSG00000277224|ENST00000356530|H2BC7;ENSG00000274641|ENST00000616182|H2BC17;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000274290|ENST00000614097|H2BC6;ENST00000465850.1_1_3:113822098-113822344:-|nuORF;nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000124635|ENST00000339812|H2BC11;nc|ENSG00000220323|Q6DRA6|H2BC19P;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000275713|ENST00000619466|H2BC9;nc|ENSG00000261716|Q6DN03|H2BC20P;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;ENSG00000196890|ENST00000693095|H2BC26;ENST00000369385.5_1_1:149814728-149815097:+|nuORF;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000184678|ENST00000369155|H2BC21 19.256988751693697 0.3154191944385105 6 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}[KA]{M(Oxidation (M))|F}NS{M(Oxidation (M))|F} 9 -1 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}[KA]{M(Oxidation (M))|F}N + + 23.971 12.491 1.6069 2.3285 2.3285 50.644 0.0 0.0 0.0 0.0 -0.5515241937520194 -0.5515241937520194 0.0 0 0.3252574989159953 0.0 0.2134679910804404 0.0 {[VA]|[{I|L}G]}{M(Oxidation (M))|F}[KA]{M(Oxidation (M))|F}NS{M(Oxidation (M))|F} 2.3285 - 845 + 1 1.499 106767.7 0.5099999904632568 3137 5577 8713 SUDHL4_400M_050219_2,8716 SUDHL4_400M_050219_2,8716,KAMGIMNSF False False KAMGIMNSF 47.732492 515.739245593548 612230.6875 8713.0 ENSG00000277224|ENST00000356530|H2BC7;;ENSG00000274641|ENST00000616182|H2BC17;;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;;ENSG00000273802|ENST00000541790|H2BC8;;ENSG00000274290|ENST00000614097|H2BC6;;ENST00000465850.1_1_3:113822098-113822344:-|nuORF;;nc|ENSG00000203814|Q5QNW6-2|H2BC18;;ENSG00000203814|ENST00000369167|H2BC18;;ENSG00000233822|ENST00000612898|H2BC15;;ENSG00000276410|ENST00000615966|H2BC3;;ENSG00000124635|ENST00000339812|H2BC11;;nc|ENSG00000220323|Q6DRA6|H2BC19P;;ENSG00000234289|ENST00000599962|H2BC12L;;ENSG00000275713|ENST00000619466|H2BC9;;nc|ENSG00000261716|Q6DN03|H2BC20P;;ENST00000436555.1_1_1:228651947-228652295:-|nuORF;;ENSG00000196890|ENST00000693095|H2BC26;;ENST00000369385.5_1_1:149814728-149815097:+|nuORF;;ENSG00000158373|ENST00000377777|H2BC5;;ENSG00000273703|ENST00000621112|H2BC14;;ENSG00000278588|ENST00000377733|H2BC10;;ENSG00000180596|ENST00000396984|H2BC4;;ENSG00000197903|ENST00000356950|H2BC12;;ENSG00000185130|ENST00000377401|H2BC13;;ENSG00000184678|ENST00000369155|H2BC21 3.017239570617676 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8717 47.746 800.0 90239.0 25 0 10087.0 + 23863 LVKNGKLHL 9 104 511.327412694029 1020.640272454858 2 511.3272582888603 MULTI CID FTMS 0 0 0 8713 105760.3515625 0.878952733190392 1 -0.0784759521484375 4 Unmodified _LVKNGKLHL_ REV__ENSG00000157538|ENST00000309117|VPS26C;REV__ENST00000399000.7_1_21:38604874-38639643:-|nuORF;REV__ENST00000475009.1_1_21:38610748-38639643:-|nuORF;REV__ENST00000480452.5_1_21:38605608-38639601:-|nuORF;REV__ENST00000492514.1_1_21:38610748-38639601:-|nuORF;REV__nc|ENSG00000157538|O14972-2|VPS26C 8.593279151180031 0.6146971463335029 6 {M(Oxidation (M))|F} 1 -1 12.474 0.0 0.0 1.2222 0.0 0.0 855.5936853960675 0.0 855.5936853960675 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.2222 - 59 + 1 1.499 59183.4 0.4699999988079071 3138 5577 8713 SUDHL4_400M_050219_2,8717 SUDHL4_400M_050219_2,8717,LVKNGKLHL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8718 47.76 800.0 158600.0 25 0 15930.0 + 17140 KLIAQNLEL 9 149 521.3193206611843 1040.6240883891685 2 521.3199951052666 MULTI CID FTMS 0 0 0 8713 99881.140625 0.5099281908577699 -2 0.0450706481933593 5 Unmodified _KLIAQNLEL_ ENSG00000138160|ENST00000260731|KIF11 43.85829265575387 0.0542763391141878 6 {I|L}{I|L}KAQN{I|L}E{I|L} 9 2 + 60.671 0.0 0.0 5.8303 5.8303 83.944 0.0 0.0 0.0 5.500655302271923 16.478174818886373 5.500655302271923 5.500655302271923 0 0.4247425010840047 0.8860566476931632 0.0 1.5044321917401078 {I|L}{I|L}KAQN{I|L}E{I|L};[Q{I|L}]NA{I|L}K{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QA{I|L}K{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}A{I|L}{I|L}K{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}A{I|L}K{I|L}E{I|L};[K{I|L}]{I|L}AQN{I|L}E{I|L};{I|L}{I|L}KA[AG]N{I|L}E{I|L};{I|L}{I|L}KAQGG{I|L}E{I|L};[Q{I|L}][{I|L}A]KN{I|L}E{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}VVKN{I|L}E{I|L} 5.8303;5.3017;5.148;5.1096;5.0335;5.028;4.9454;4.9454;4.8262;4.6725 -;-;-;-;-;+;-;-;-;- + 1323 1 1.499 101462.9 0.9900000095367432 3139 5577 8713 SUDHL4_400M_050219_2,8718 SUDHL4_400M_050219_2,8718,KLIAQNLEL True True KLIAQNLEL 47.760152 521.319995105267 973468.75 8713.0 ENSG00000138160|ENST00000260731|KIF11 3.897071202596029 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8719 47.773 724.0 179890.0 25 0 23616.0 + 43979 YIDEGRLVL 9 117 539.2984005153304 1076.5822480974607 2 539.3002197146416 MULTI CID FTMS 0 0 0 8713 103952.6953125 0.8285041602525198 -1 0.0040702819824218 6 Unmodified _YIDEGRLVL_ ENSG00000057252|ENST00000367619|SOAT1;nc|ENSG00000057252|P35610-2|SOAT1;nc|ENSG00000057252|P35610-3|SOAT1 43.77239144664712 0.0547478964384323 6 Y{I|L}DE 4 5 64.68 0.0 0.0 6.0079 0.0 0.0 0.0 553.3469286174529 553.3469286174529 40.088103344098585 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3494850021680094 0.0 + Y{I|L}DE 6.0079 + + 372 + 1 1.499 102827.1 1.0 3140 5577 8713 SUDHL4_400M_050219_2,8719 SUDHL4_400M_050219_2,8719,YIDEGRLVL True True YIDEGRLVL 47.77271 539.300219714642 790617.0625 8713.0 nc|ENSG00000057252|P35610-2|SOAT1;;ENSG00000057252|ENST00000367619|SOAT1;;nc|ENSG00000057252|P35610-3|SOAT1 3.6450678507486978 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8720 47.787 800.0 81673.0 25 0 9760.4 + 23131 LSPPSGSLVL 10 99 485.2842113741087 968.5538698150174 2 485.2848693728447 MULTI CID FTMS 0 0 0 8713 89548.1953125 1.0 0 0.0 7 Unmodified _LSPPSGSLVL_ REV__ENST00000482178.5_1_22:41973324-41980100:-|nuORF 30.63653989081413 0.2803493085145199 6 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}[DP]VV{I|L} 9 -1 + 34.102 0.0 0.0 3.5209 3.5209 71.127 0.0 0.0 0.0 0.9654243265785638 0.7121122500096604 0.7121122500096604 0.9801371741293324 0 0.6989700043360187 1.6989700043360187 0.75 0.0 {[TV]|[{I|L}S]}{[QV]|[N{I|L}]|[RA]|[KV]}[DP]VV{I|L};{[TV]|[{I|L}S]}P{[MG]|[TS]}[PG]VV{I|L};{[TV]|[{I|L}S]}P[RV]{[DA]|[EG]}V{I|L};[DP]VD[KA]{I|L}V{I|L};[{I|L}T]T[Y{M(Oxidation (M))|F}]{I|L}V{I|L};{[QN]|[E{I|L}]|[KN]}DK[PG]VV{I|L};[DP]VD{I|L}[KA]V{I|L};{[TV]|[{I|L}S]}P{[MG]|[TS]}[RP]V{I|L};[DP]VDRRV{I|L};[DP]V[K{I|L}]{[DA]|[EG]}V{I|L} 3.5209;3.4197;3.0561;3.0342;2.9389;2.9052;2.8524;2.7453;2.6761;2.5924 -;-;-;-;-;-;-;-;-;- 405 1 1.499 56173.6 0.4199999868869781 3141 5577 8713 SUDHL4_400M_050219_2,8720 SUDHL4_400M_050219_2,8720,LSPPSGSLVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8722 47.794 186.0 239440.0 25 0 17269.0 + 9701 FLSNDTVQL 9 77 518.7691181396854 1035.5236833461706 2 518.7693969607353 MULTI CID FTMS 0 0 0 8721 240511.5 0.2141721296129124 5 -0.231414794921875 1 Unmodified _FLSNDTVQL_ ENSG00000012124|ENST00000085219|CD22;nc|ENSG00000012124|P20273-2|CD22;nc|ENSG00000012124|P20273-3|CD22;nc|ENSG00000012124|P20273-4|CD22;nc|ENSG00000012124|P20273-5|CD22 21.74664581756881 0.2544899275067181 6 Q{I|L} 2 7 18.711 0.0 0.0 1.8069 0.0 0.0 776.3724294142968 0.0 776.3724294142968 0.0 11.744018128452822 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 + Q{I|L} 1.8069 + + 51 + 1 1.499 39509.0 1.0 3142 5578 8721 SUDHL4_400M_050219_2,8722 SUDHL4_400M_050219_2,8722,FLSNDTVQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8723 47.798 185.0 205800.0 25 0 42123.0 + 43396 WQRPQKRKR 9 58 641.8822565304728 1281.7499601277457 2 641.8825561404228 MULTI CID FTMS 0 0 0 8721 359050.25 0.880409762353283 1 -0.0457916259765625 2 Unmodified _WQRPQKRKR_ REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF 0.6014990680409731 0.8936861360942873 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.499 36631.3 1.0 3143 5578 8721 SUDHL4_400M_050219_2,8723 SUDHL4_400M_050219_2,8723,WQRPQKRKR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8724 47.802 250.0 273040.0 25 0 19918.0 + -1 RIMGNIWDA 9 87 546.2687327174039 1090.5229125016076 2 546.2687866091728 MULTI CID FTMS 0 0 0 8721 212972.4375 1.0 0 0.0 3 Oxidation (M) _RIM(Oxidation (M))GNIWDA_ nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155 14.838274106304384 0.4350285940865338 6 {I|L}WW 3 -1 27.435 0.0 0.0 2.5158 0.0 0.0 587.2844315226936 0.0 587.2844315226936 0.0 8.711375162600703 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}WW 2.5158 - 112 1 1.499 57552.8 1.0 3144 5578 8721 SUDHL4_400M_050219_2,8724 SUDHL4_400M_050219_2,8724,RIMGNIWDA False False RIMGNIWDA 47.80227 546.268786609173 1174730.625 8721.0 nc|ENSG00000113569|O75694-2|NUP155;;ENSG00000113569|ENST00000231498|NUP155 3.6558412313461295 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8725 47.808 294.0 147330.0 25 0 10134.0 + 17341 KLWESPNVL 9 77 543.3042318458835 1084.5939107585668 2 543.3045532107353 MULTI CID FTMS 0 0 0 8721 163275.5 0.8087799600642124 -1 0.0784759521484375 4 Unmodified _KLWESPNVL_ ENSG00000100360|ENST00000433985|IFT27;ENST00000471809.5_1_22:37159849-37172159:-|nuORF;nc|ENSG00000100360|Q9BW83-2|IFT27 30.63653989081413 0.1413794767160703 6 [W{I|L}]KES[NP]V{I|L} 9 2 + 27.143 0.0 0.0 2.5026 2.5026 76.584 0.0 0.0 0.0 2.631288188505682 13.16401934919782 2.631288188505682 8.09185484123612 0 0.4929928190999391 0.0 0.805462187404089 0.4247425010840047 [W{I|L}]KES[NP]V{I|L};[NG]KKES[NP]V{I|L};{[QN]|[E{I|L}]|[KN]}[WK]S[NP]V{I|L};{[QN]|[E{I|L}]|[KN]}C(Carbamidomethyl (C))[K{I|L}][NP]V{I|L} 2.5026;1.7566;1.3103;1.2368 -;-;-;- 80 1 1.499 43321.6 1.0 3145 5578 8721 SUDHL4_400M_050219_2,8725 SUDHL4_400M_050219_2,8725,KLWESPNVL False True KLWESPNVL 47.807677 543.304553210735 1035506.8125 8721.0 ENST00000471809.5_1_22:37159849-37172159:-|nuORF;;ENSG00000100360|ENST00000433985|IFT27;;nc|ENSG00000100360|Q9BW83-2|IFT27 5.110280513763428 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8726 47.818 619.0 80356.0 25 0 8205.4 23897 LVLYHLSV 8 70 472.2826293138011 942.5507056944024 2 472.2821227908134 MULTI CID FTMS 0 0 0 8721 109833.40625 0.160806800000183 5 -0.231414794921875 5 Unmodified _LVLYHLSV_ ENSG00000112511|ENST00000374516|PHF1;nc|ENSG00000112511|O43189-2|PHF1 20.871210003555333 0.6025813472596342 6 A{I|L}{I|L}SV 5 4 44.706 0.0 0.0 4.7431 0.0 0.0 441.2329273908219 0.0 441.2329273908219 0.0 27.258950235313858 0.0 0.0 0 0.8252574989159953 0.0 0.0 0.0 A{I|L}{I|L}SV 4.7431 - 120 1 1.499 46054.5 1.0 3146 5578 8721 SUDHL4_400M_050219_2,8726 SUDHL4_400M_050219_2,8726,LVLYHLSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8727 47.832 800.0 102400.0 25 0 3602.1 -1 0 55 1082.7216676693038 5408.571956013519 5 1083.122851550579 MULTI CID FTMS 0 0 0 8721 106856.53125 1.0 0 0.0 6 6 [RV]AAAAA 7 -1 48.984 0.0 0.0 0.90567 0.0 0.0 0.0 4795.232605627398 4795.232605627398 36.99433219358141 0.0 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 [RV]AAAAA 0.90567 - 42 + 1 1.499 62260.9 0.4199999868869781 3147 5578 8721 SUDHL4_400M_050219_2,8727 SUDHL4_400M_050219_2,8727, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8729 47.837 63.0 579210.0 25 0 130880.0 -1 MVIFLIIP 8 54 494.3009812633785 986.5874095935568 2 494.3010436892509 MULTI CID FTMS 0 0 0 8728 763153.1875 0.4211779854500626 5 -0.2529144287109375 1 Acetyl (Protein N-term) _(Acetyl (Protein N-term))MVIFLIIP_ ENST00000281172.9_1_12:15835827-15835881:-|nuORF 0.0 0.8243325171867699 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.499 35762.3 1.0 3148 5579 8728 SUDHL4_400M_050219_2,8729 SUDHL4_400M_050219_2,8729,MVIFLIIP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8730 47.841 192.0 277910.0 25 0 56464.0 + 43476 WVILLFTI 8 77 502.8142357664743 1003.6139185997486 2 502.8141967654228 MULTI CID FTMS 0 0 0 8728 347590.75 0.4148219863890372 4 -0.1856231689453125 2 Unmodified _WVILLFTI_ REV__ENST00000361464.7_1_10:103544260-103544341:-|nuORF 0.6903765706972694 0.8201419426409876 6 {I|L} 1 -1 10.596 0.0 0.0 1.0558 0.0 0.0 872.5188543681064 0.0 872.5188543681064 0.0 9.882594520752386 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0558 + + 5 + 1 1.499 48924.3 1.0 3149 5579 8728 SUDHL4_400M_050219_2,8730 SUDHL4_400M_050219_2,8730,WVILLFTI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8732 47.849 293.0 214430.0 25 0 22752.0 40756 VLIWCLVI 8 92 508.3018625351411 1014.5891721370822 2 508.3026000857353 MULTI CID FTMS 0 0 0 8731 221301.5 0.0369063668638105 12 -0.7475624084472656 1 Carbamidomethyl (C) _VLIWC(Carbamidomethyl (C))LVI_ ENSG00000001626|ENST00000003084|CFTR;nc|ENSG00000001626|P13569-2|CFTR 52.33426049586781 0.1282678332820461 6 V{M(Oxidation (M))|F}V{I|L} 4 5 28.686 0.0 0.0 2.8273 0.0 0.0 538.3218861310562 0.0 538.3218861310562 0.0 9.975475376234469 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 V{M(Oxidation (M))|F}V{I|L} 2.8273 - 154 1 1.499 52792.2 1.0 3150 5580 8731 SUDHL4_400M_050219_2,8732 SUDHL4_400M_050219_2,8732,VLIWCLVI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8733 47.863 800.0 53516.0 25 0 15203.0 + 28985 QDRPKERLRR 10 66 677.3950512041706 1352.7755494751411 2 677.3952514529228 MULTI CID FTMS 0 0 0 8731 166265.96875 0.5789092916680539 -2 0.0542716979980468 2 Unmodified _QDRPKERLRR_ REV__ENSG00000104365|ENST00000520810|IKBKB;REV__ENST00000342222.6_1_8:42151073-42188494:+|nuORF;REV__nc|ENSG00000104365|O14920-2|IKBKB;REV__nc|ENSG00000104365|O14920-4|IKBKB 1.4819007175156935 0.719781833666733 6 E 1 -1 0.088644 0.0 0.0 0.0065527 0.0 0.0 985.582844252288 235.11873804263908 1220.7015822949272 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.0065527 + + 5 + 1 1.499 43534.6 0.6100000143051147 3151 5580 8731 SUDHL4_400M_050219_2,8733 SUDHL4_400M_050219_2,8733,QDRPKERLRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8734 47.868 304.0 256800.0 25 0 26039.0 + 29452 QLIDIIHTA 9 104 512.2938466334132 1022.5731403336264 2 512.2955200076103 MULTI CID FTMS 0 0 0 8731 137576.453125 0.3747884792409779 -2 0.0542716979980468 3 Unmodified _QLIDIIHTA_ ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 54.773552608820026 0.0299037012502309 6 [Q{I|L}]{I|L}D{I|L}{I|L}H[TA] 9 0 + 59.082 0.0 0.0 5.7778 5.7778 89.4 0.0 0.0 0.0 28.161064762674144 10.36098023303616 10.36098023303616 11.695925227640984 0 0.2742275032520141 2.0 1.9049471895720984 0.0 + + [Q{I|L}]{I|L}D{I|L}{I|L}H[TA];[Q{I|L}]{I|L}R{[QG]|[NA]}H[TA];VV[VG]D{I|L}{I|L}H[TA];{NN|[MP]|[D{I|L}]|[EV]}{I|L}HTA{I|L}[Q{I|L}];[{I|L}V]EHTA{I|L}[Q{I|L}];[Q{I|L}]{I|L}[{M(Oxidation (M))|F}V][HA][VP];[{I|L}T][YT]TA{I|L}[Q{I|L}];{[TV]|[{I|L}S]}[RH]A[QA][Q{I|L}];[{I|L}T][HA]{I|L}D{I|L}[Q{I|L}];{[NV]|[RG]}QQ{I|L}{I|L}H[TA] 5.7778;4.634;2.0657;2.0026;1.5102;1.4751;1.3938;1.2004;1.1769;1.0753 +;-;-;-;-;-;-;-;-;- + 582 + 1 1.499 64940.1 1.0 3152 5580 8731 SUDHL4_400M_050219_2,8734 SUDHL4_400M_050219_2,8734,QLIDIIHTA True True QLIDIIHTA 47.868106 512.29552000761 2075886.625 8731.0 ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 6.377184232076009 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8735 47.882 800.0 87359.0 25 0 20290.0 + 10262 FQVGKKVLDLY 11 89 655.3819204895708 1308.7492880459415 2 655.3825561404228 MULTI CID FTMS 0 0 0 8731 128888.65625 0.313139137789399 14 -0.8760299682617188 4 Unmodified _FQVGKKVLDLY_ REV__ENSG00000141198|ENST00000575882|TOM1L1;REV__nc|ENSG00000141198|O75674-2|TOM1L1;REV__nc|ENSG00000141198|O75674-3|TOM1L1 2.9952420565917617 0.861016188266951 6 N 1 -1 3.0989 0.0 0.0 0.23679 0.0 0.0 672.4412568953541 519.2376192682249 1191.678876163579 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.23679 - 1 + 1 1.499 69551.7 0.5299999713897705 3153 5580 8731 SUDHL4_400M_050219_2,8735 SUDHL4_400M_050219_2,8735,FQVGKKVLDLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8736 47.896 800.0 133810.0 25 0 15797.0 + 33525 SILEDPPSI 9 131 485.7577085905546 0 485.7586852908134 PEAK CID FTMS 0 0 0 8731 92347.25 0.4493790971973949 -2 0.0542716979980468 5 Unmodified _SILEDPPSI_ ENSG00000064102|ENST00000261191|INTS13;nc|ENSG00000064102|Q9NVM9-2|INTS13 61.357469665136826 0.0154611170783358 6 DPPS 4 5 26.164 0.0 0.0 2.6987 0.0 0.0 442.24044051919685 128.07195459537346 570.3123951145703 0.0 0.0 0.0 0.0 0 0.805462187404089 0.0 1.1989700043360187 0.0 + DPPS 2.6987 + + 243 + 1 1.499 83997.9 0.9300000071525574 3154 5580 8731 SUDHL4_400M_050219_2,8736 SUDHL4_400M_050219_2,8736,SILEDPPSI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8737 47.91 800.0 117060.0 25 0 14162.0 11603 GLAARDVQK 9 113 479.2775103076913 956.5404676821826 2 479.2773010134697 MULTI CID FTMS 0 0 0 8731 94775.9375 0.675750934947027 -2 0.0542716979980468 6 Unmodified _GLAARDVQK_ ENSG00000149262|ENST00000534064|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;nc|ENSG00000149262|Q96HW7-2|INTS4;nc|ENSG00000149262|Q96HW7-3|INTS4 9.347437153973935 0.588369872918737 6 {I|L} 1 8 10.837 0.0 0.0 1.133 0.0 0.0 825.4455255208529 0.0 825.4455255208529 0.0 2.113817961985349 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.133 + + 23 + 1 1.499 75543.9 0.9700000286102296 3155 5580 8731 SUDHL4_400M_050219_2,8737 SUDHL4_400M_050219_2,8737,GLAARDVQK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8739 47.927 800.0 163310.0 25 0 20747.0 + 22802 LQVRLQYRGS 10 107 610.3480301087018 1218.6815072842037 2 610.3483764529228 MULTI CID FTMS 0 0 0 8738 116287.28125 0.3292481021658464 7 -0.3984527587890625 1 Unmodified _LQVRLQYRGS_ REV__ENSG00000221986|ENST00000357155|MYBPHL 3.5964929083625545 0.7100006075494749 6 {M(Oxidation (M))|F} 1 -1 9.464 0.0 0.0 0.77657 0.0 0.0 1053.6022969343971 0.0 1053.6022969343971 0.0 6.354094346812561 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.77657 - 10 + 1 1.499 98808.2 0.6600000262260437 3156 5581 8738 SUDHL4_400M_050219_2,8739 SUDHL4_400M_050219_2,8739,LQVRLQYRGS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8740 47.941 800.0 66245.0 25 0 4222.7 -1 0 83 1010.9735345403608 2019.9325161475213 2 1011.47716063261 MULTI CID FTMS 0 0 0 8738 126835.484375 0.826128258104253 -2 0.0772590637207031 2 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}A[Q{I|L}]V{I|L}[YT]QN{I|L} 13 -1 41.183 0.0 0.0 2.0388 0.0 0.0 0.0 469.157222528634 469.157222528634 26.229698991760465 0.0 0.0 0.0 0 0.3494850021680094 0.0 0.9749073637206092 0.5 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}A[Q{I|L}]V{I|L}[YT]QN{I|L} 2.0388 - 1083 1 1.499 41840.8 0.4799999892711639 3157 5581 8738 SUDHL4_400M_050219_2,8740 SUDHL4_400M_050219_2,8740, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8741 47.952 591.0 117670.0 25 0 18877.0 + 44408 YLYGQTTTYL 10 89 611.8028394758522 1221.5911260185044 2 611.8030273318291 MULTI CID FTMS 0 0 0 8738 126875.546875 1.0 0 0.0 3 Unmodified _YLYGQTTTYL_ ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A 12.531546534597751 0.6372748319968624 6 {I|L} 1 9 13.495 0.0 0.0 1.1047 0.0 0.0 1090.496290668698 0.0 1090.496290668698 0.0 8.010299956639813 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 1.1047 + + 62 + 1 1.499 57319.4 1.0 3158 5581 8738 SUDHL4_400M_050219_2,8741 SUDHL4_400M_050219_2,8741,YLYGQTTTYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8742 47.965 800.0 133520.0 25 0 18721.0 39754 VELLKTTTRD 10 118 588.3355217626658 1174.6564905921316 2 588.3353149294853 MULTI CID FTMS 0 0 0 8738 113109.2265625 0.5253541591281621 -3 0.1230506896972656 4 Unmodified _VELLKTTTRD_ ENSG00000135951|ENST00000393483|TSGA10;ENST00000478090.5_1_2:99689501-99743552:-|nuORF;nc|ENSG00000135951|Q9BZW7-2|TSGA10 5.296884461304476 0.7021353017287152 6 TS 2 9 10.969 0.0 0.0 0.93381 0.0 0.0 207.1920873712316 776.3714083307249 983.5634957019564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TS 0.93381 - 100 + 1 1.499 81152.2 0.4900000095367431 3159 5581 8738 SUDHL4_400M_050219_2,8742 SUDHL4_400M_050219_2,8742,VELLKTTTRD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8743 47.975 561.0 161260.0 25 0 13249.0 23422 LTELRELSL 9 136 537.315516184965 1072.6164794367298 2 537.3159057497978 MULTI CID FTMS 0 0 0 8738 99548.953125 1.0 0 0.0 5 Unmodified _LTELRELSL_ ENSG00000172061|ENST00000347624|LRRC15;nc|ENSG00000172061|Q8TF66-2|LRRC15 43.85829265575387 0.0542763391141878 6 {[QN]|[E{I|L}]|[KN]}AVVET{I|L}S{I|L} 10 5 + 56.068 0.0 0.0 5.2272 5.2272 80.167 0.0 0.0 0.0 12.931825014007217 17.360308677862335 12.931825014007217 3.521825181113627 0 0.0 1.0969100130080565 1.048455006504028 0.0 {[QN]|[E{I|L}]|[KN]}AVVET{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]ET{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]EG{I|L}M{I|L};{[QN]|[E{I|L}]|[KN]}AVVW{I|L}M{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]W{I|L}M{I|L};{[QN]|[E{I|L}]|[KN]}AVV{[DS]|[MA]|[CV]|TT}{I|L}D{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RN]{I|L}S{I|L};{[QN]|[E{I|L}]|[KN]}[R{I|L}]{[DS]|[MA]|[CV]|TT}{I|L}D{I|L};{[QN]|[E{I|L}]|[KN]}[KT][RN]{I|L}S{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{[NV]|[RG]}G{I|L}S{I|L} 5.2272;4.8989;3.8939;3.6132;3.2899;3.1598;2.8603;2.8314;2.8224;2.6274 -;-;-;-;-;-;-;-;-;- 642 1 1.499 77347.4 1.0 3160 5581 8738 SUDHL4_400M_050219_2,8743 SUDHL4_400M_050219_2,8743,LTELRELSL True True RLIEETISI 47.97519 537.315905749798 491004.59375 8738.0 ENST00000427274.6_1_17:28822526-28847071:+|nuORF;;ENSG00000108587|ENST00000451249|GOSR1;;nc|ENSG00000108587|O95249-2|GOSR1;;nc|ENSG00000108587|O95249|GOSR1 4.323463598887126 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8744 47.984 516.0 427680.0 25 0 84408.0 -1 0 61 860.883571166313 3439.505178798852 4 861.3867065310478 MULTI CID FTMS 0 0 0 8738 236174.0 0.9311007649556908 -1 0.0687789916992187 6 6 SA 2 -1 10.969 0.0 0.0 0.31892 0.0 0.0 2696.0838663982645 582.3342989557249 3278.418165353989 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SA 0.31892 - 15 + 1 1.499 159530.8 1.0 3161 5581 8738 SUDHL4_400M_050219_2,8744 SUDHL4_400M_050219_2,8744, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8746 47.989 98.0 417380.0 25 0 101880.0 + 29169 QFVFRTRRR 9 47 633.3691319727506 1264.723711012301 2 633.3693725466728 MULTI CID FTMS 0 0 0 8745 565723.6875 0.529427216398174 6 -0.3237342834472656 1 Unmodified _QFVFRTRRR_ REV__ENSG00000172732|ENST00000308110|MUS81 0.5247636613948944 0.8963649302248013 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.499 41056.2 1.0 3162 5582 8745 SUDHL4_400M_050219_2,8746 SUDHL4_400M_050219_2,8746,QFVFRTRRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8747 48.0 597.0 96355.0 25 0 13350.0 + -1 VMGKIFAV 8 105 440.75166412677737 879.4887753203548 2 440.7517883181572 MULTI CID FTMS 0 0 0 8745 126635.578125 0.2843584281372879 2 -0.1009368896484375 2 Oxidation (M) _VM(Oxidation (M))GKIFAV_ ENSG00000145332|ENST00000273963|KLHL8;nc|ENSG00000145332|Q9P2G9-2|KLHL8 20.871210003555333 0.6025813472596342 6 {M(Oxidation (M))|F} 1 -1 16.99 0.0 0.0 1.9318 0.0 0.0 714.4096412644939 0.0 714.4096412644939 0.0 -0.9691001300805624 -0.9691001300805624 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.9318 + + 124 + 1 1.499 48585.9 1.0 3163 5582 8745 SUDHL4_400M_050219_2,8747 SUDHL4_400M_050219_2,8747,VMGKIFAV False False VMGKIFAV 47.999524 440.751788318157 4435380.5 8745.0 ENSG00000145332|ENST00000273963|KLHL8;;nc|ENSG00000145332|Q9P2G9-2|KLHL8 2.315291608994206 2.0 True 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8748 48.012 718.0 136440.0 25 0 14550.0 + 17244 KLLSKFYEL 9 136 570.8365778492878 1139.6586027653757 2 570.8368408083916 MULTI CID FTMS 0 0 0 8745 122752.6171875 0.7124109663971545 -1 0.0747184753417968 3 Unmodified _KLLSKFYEL_ ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48;nc|ENSG00000090686|Q86UV5-8|USP48 84.73772076367982 0.0163688523900332 6 K{I|L}{I|L}{M(Oxidation (M))|F}Y{I|L}{M(Oxidation (M))|F}S 8 5 78.996 0.0 0.0 6.9316 0.0 0.0 0.0 125.07229028873282 125.07229028873282 29.53223671226398 0.0 0.0 0.0 0 0.805462187404089 0.8860566476931632 1.8996498648046136 0.0 K{I|L}{I|L}{M(Oxidation (M))|F}Y{I|L}{M(Oxidation (M))|F}S 6.9316 - 2096 + 1 1.499 78155.6 1.0 3164 5582 8745 SUDHL4_400M_050219_2,8748 SUDHL4_400M_050219_2,8748,KLLSKFYEL True True KLLSKFYEL 48.011982 570.836840808392 769702.4375 8745.0 nc|ENSG00000090686|Q86UV5-8|USP48;;ENSG00000090686|ENST00000308271|USP48;;nc|ENSG00000090686|Q86UV5-7|USP48;;nc|ENSG00000090686|Q86UV5-2|USP48;;nc|ENSG00000090686|Q86UV5-4|USP48;;nc|ENSG00000090686|Q86UV5-3|USP48 5.973845322926839 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8749 48.018 328.0 130240.0 25 0 9400.4 + 29529 QLMEQVAQL 9 89 538.2772097367948 0 538.2770873904228 PEAK CID FTMS 0 0 0 8745 102381.28125 0.9196333032795996 -1 0.0747184753417968 4 Oxidation (M) _QLM(Oxidation (M))EQVAQL_ ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 52.268347100219714 0.0254642048063414 6 VQ{I|L}Q 4 7 21.402 0.0 0.0 1.9918 0.0 0.0 330.1921625382396 273.05515466861567 603.2473172068552 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.3494850021680094 VQ{I|L}Q 1.9918 - 62 + 1 1.499 38719.8 1.0 3165 5582 8745 SUDHL4_400M_050219_2,8749 SUDHL4_400M_050219_2,8749,QLMEQVAQL True False QLMEQVAQL 48.017942 538.277087390423 614913.625 8745.0 nc|ENSG00000204843|Q14203-3|DCTN1;;ENSG00000204843|ENST00000628224|DCTN1;;nc|ENSG00000204843|Q14203-4|DCTN1;;nc|ENSG00000204843|Q14203-2|DCTN1;;nc|ENSG00000204843|Q14203-6|DCTN1;;nc|ENSG00000204843|Q14203-5|DCTN1 5.01481048266093 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8751 48.036 800.0 192740.0 25 0 11301.0 -1 0 125 1016.142338520698 3045.405186162294 3 1016.479296863079 MULTI CID FTMS 0 0 0 8750 260929.0625 1.0 0 0.0 1 6 [Q{I|L}]VDTTVE{I|L} 9 -1 42.78 0.0 0.0 1.4047 0.0 0.0 0.0 2043.8505956684064 2043.8505956684064 5.651961136536826 0.0 0.0 0.0 0 0.0 0.0 1.305462187404089 0.6694451763165201 [Q{I|L}]VDTTVE{I|L} 1.4047 - 2838 1 1.499 109651.0 0.6499999761581421 3166 5583 8750 SUDHL4_400M_050219_2,8751 SUDHL4_400M_050219_2,8751, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8752 48.043 382.0 255430.0 25 0 38988.0 + 37494 TLFPSKIGV 9 89 481.2896647108528 960.5647764885056 2 481.2903320193291 MULTI CID FTMS 0 0 0 8750 176364.96875 0.3017025674296013 -2 0.1083641052246093 2 Unmodified _TLFPSKIGV_ ENSG00000114978|ENST00000396049|MOB1A;ENSG00000173542|ENST00000309395|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;nc|ENSG00000173542|Q7L9L4-2|MOB1B 34.40172386719151 0.1061884637610825 6 [{I|L}T]{M(Oxidation (M))|F}PSK{I|L}GV 9 0 + 54.567 0.0 0.0 5.6808 5.6808 81.962 0.0 0.0 0.0 14.418885113023016 0.934494808985491 0.934494808985491 3.6991128507179374 0 0.7742275032520141 2.0 0.3494850021680094 0.0 + + [{I|L}T]{M(Oxidation (M))|F}PSK{I|L}GV;[{I|L}T]{M(Oxidation (M))|F}PSK[VG]{I|L};[{I|L}T]{M(Oxidation (M))|F}G{I|L}{I|L}[QA]V;[{I|L}T]{M(Oxidation (M))|F}G{I|L}{I|L}{[QG]|[NA]}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TPSK{I|L}GV;[{I|L}T]{M(Oxidation (M))|F}G{I|L}{I|L}AAGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TPSK[VG]{I|L};[KS]T{I|L}{I|L}G{M(Oxidation (M))|F}PV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TG{I|L}{I|L}[QA]V;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TG{I|L}{I|L}{[QG]|[NA]}{I|L} 5.6808;5.2957;3.1099;3.1099;2.8431;2.5363;2.458;2.4465;0.27218;0.27218 +;-;-;-;-;-;-;-;-;- + 396 + 1 1.499 79115.8 1.0 3167 5583 8750 SUDHL4_400M_050219_2,8752 SUDHL4_400M_050219_2,8752,TLFPSKIGV True True TLFPSKIGV 48.042525 481.290332019329 2808508.25 8750.0 ENSG00000173542|ENST00000309395|MOB1B;;ENST00000497054.5_1_2:74386211-74405801:-|nuORF;;nc|ENSG00000173542|Q7L9L4-2|MOB1B;;ENSG00000114978|ENST00000396049|MOB1A 6.206868012746175 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8753 48.051 485.0 130390.0 25 0 13183.0 + 11879 GLVDKLQAL 9 99 478.7927705891858 955.5709882451716 2 478.7923156619072 MULTI CID FTMS 0 0 0 8750 109899.5625 1.0 0 0.0 3 Unmodified _GLVDKLQAL_ ENSG00000005194|ENST00000394391|CIAPIN1;ENST00000566284.1_1_16:57467902-57474840:-|nuORF;nc|ENSG00000005194|Q6FI81-3|CIAPIN1 26.88365393820708 0.1891292719743517 6 {[VA]|[{I|L}G]}VD 4 5 40.362 0.0 0.0 4.2238 0.0 0.0 0.0 568.3478487604124 568.3478487604124 23.70629071651592 0.0 0.0 0.0 0 0.6549471895720984 2.0 0.0 0.0 + {[VA]|[{I|L}G]}VD 4.2238 + + 143 + 1 1.499 53980.4 1.0 3168 5583 8750 SUDHL4_400M_050219_2,8753 SUDHL4_400M_050219_2,8753,GLVDKLQAL False True GLVDKLQAL 48.051094 478.792315661907 501858.1875 8750.0 ENSG00000005194|ENST00000394391|CIAPIN1;;nc|ENSG00000005194|Q6FI81-3|CIAPIN1;;ENST00000566284.1_1_16:57467902-57474840:-|nuORF 4.55327312151591 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8754 48.065 800.0 55668.0 25 0 13378.0 + 7575 EIKKWLELLQA 11 69 685.9087019412208 1369.8028509492417 2 685.9096557497978 MULTI CID FTMS 0 0 0 8750 83967.640625 1.0 0 0.0 4 Unmodified _EIKKWLELLQA_ REV__nc|ENSG00000071242|Q15349-2|RPS6KA2;REV__nc|ENSG00000071242|Q15349-3|RPS6KA2 2.498486711656943 0.8633599123570009 6 {I|L} 1 -1 9.3323 0.0 0.0 0.68129 0.0 0.0 1238.7080308582242 0.0 1238.7080308582242 0.0 8.618967940305254 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.68129 + + 25 + 1 1.499 45708.1 0.449999988079071 3169 5583 8750 SUDHL4_400M_050219_2,8754 SUDHL4_400M_050219_2,8754,EIKKWLELLQA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8755 48.079 800.0 101010.0 25 0 10046.0 + -1 TLMAEMHVV 9 154 531.7518965493215 0 531.7518798708916 PEAK CID FTMS 0 0 0 8750 88598.703125 1.0 0 0.0 5 2 Oxidation (M) _TLM(Oxidation (M))AEM(Oxidation (M))HVV_ nc|ENSG00000171634|Q12830|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830-4|BPTF 28.486842064014134 0.1241350795510704 6 {I|L}VT[HC]EE 7 -1 17.686 0.0 0.0 1.6661 0.0 0.0 165.04921749079762 82.06680475406483 247.11602224486245 0.0 0.0 0.0 0.0 0 0.5 0.0 1.1549471895720984 0.0 {I|L}VT[HC]EE 1.6661 - 390 + 1 1.499 64815.0 0.4399999976158142 3170 5583 8750 SUDHL4_400M_050219_2,8755 SUDHL4_400M_050219_2,8755,TLMAEMHVV False False TLMAEMHVV 48.078769 531.751879870892 460049.84375 8750.0 nc|ENSG00000171634|Q12830|BPTF;;ENSG00000171634|ENST00000306378|BPTF;;nc|ENSG00000171634|Q12830-4|BPTF 4.7840309937795 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8756 48.085 358.0 155880.0 25 0 14456.0 + 22922 KLPDGTWNL 9 104 522.2790533534614 1042.5435537737228 2 522.2798950076103 MULTI CID FTMS 0 0 0 8750 87863.21875 0.70514400930002 -2 0.1083641052246093 6 Unmodified _LSDRTPQNL_ nc|ENSG00000157540|Q13627-5|DYRK1A;ENSG00000157540|ENST00000647188|DYRK1A;nc|ENSG00000157540|Q13627|DYRK1A;nc|ENSG00000157540|Q13627-3|DYRK1A;nc|ENSG00000157540|Q13627-4|DYRK1A 30.63653989081413 0.1413794767160703 6 S{I|L}[QP]N{I|L} 6 4 30.648 0.0 0.0 2.9398 0.0 0.0 372.1763185215728 0.0 372.1763185215728 0.0 17.875240784723374 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.75 S{I|L}[QP]N{I|L} 2.9398 - 272 + 1 1.499 47130.9 1.0 3171 5583 8750 SUDHL4_400M_050219_2,8756 SUDHL4_400M_050219_2,8756,LSDRTPQNL False False KLPDGTWNL 48.085235 522.27989500761 1194119.875 8750.0 nc|ENSG00000157540|Q13627-5|DYRK1A;;ENSG00000157540|ENST00000647188|DYRK1A;;nc|ENSG00000157540|Q13627|DYRK1A;;nc|ENSG00000157540|Q13627-3|DYRK1A;;nc|ENSG00000157540|Q13627-4|DYRK1A 3.616150220235189 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8758 48.103 800.0 109440.0 25 0 22240.0 14691 IITFLPRFLY 10 97 641.8822565304728 1281.7499601277457 2 641.8826171755791 MULTI CID FTMS 0 0 0 8757 114874.4765625 0.2816781512082178 7 -0.4298744201660156 1 Unmodified _IITFLPRFLY_ ENSG00000124406|ENST00000381668|ATP8A1;ENST00000510289.1_1_4:42627549-42627741:-|nuORF;nc|ENSG00000124406|Q9Y2Q0-2|ATP8A1;nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1 1.6526216038709556 0.7189921496796233 6 P 1 9 8.7724 0.0 0.0 0.68441 0.0 0.0 1166.686084860947 0.0 1166.686084860947 0.0 8.287886595888967 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.68441 + + 8 + 1 1.499 73066.9 0.5899999737739563 3172 5584 8757 SUDHL4_400M_050219_2,8758 SUDHL4_400M_050219_2,8758,IITFLPRFLY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8759 48.107 240.0 240960.0 25 0 24701.0 + 11638 GLAPLEVRV 9 71 477.29267881664936 952.5708047000988 2 477.2928039431572 MULTI CID FTMS 0 0 0 8757 210260.15625 0.8537677948787447 -1 0.067291259765625 2 Unmodified _GLAPLEVRV_ ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-4|FLNB;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-7|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-9|FLNB 26.268140514670165 0.1969607489560049 6 {[VA]|[{I|L}G]}AP{I|L}EV[RV] 9 0 + 64.103 0.0 0.0 6.7294 6.7294 95.351 0.0 0.0 0.0 41.42667503568731 4.762036441594191 4.762036441594191 64.10273743745762 0 1.0 1.6989700043360187 0.0 0.0 + + {[VA]|[{I|L}G]}AP{I|L}EV[RV] 6.7294 + + 82 + 1 1.499 51768.0 1.0 3173 5584 8757 SUDHL4_400M_050219_2,8759 SUDHL4_400M_050219_2,8759,GLAPLEVRV False True GLAPLEVRV 48.107435 477.292803943157 1295309.5 8757.0 nc|ENSG00000136068|O75369-5|FLNB;;nc|ENSG00000136068|O75369-3|FLNB;;nc|ENSG00000136068|O75369-4|FLNB;;nc|ENSG00000136068|O75369-7|FLNB;;nc|ENSG00000136068|O75369-2|FLNB;;ENSG00000136068|ENST00000295956|FLNB;;nc|ENSG00000136068|O75369-6|FLNB;;nc|ENSG00000136068|O75369-9|FLNB;;nc|ENSG00000136068|O75369-8|FLNB 5.860703945159912 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8760 48.121 800.0 202090.0 25 0 13439.0 + 16705 KESSTVFEL 9 153 520.2689889849412 1038.5234250366825 2 520.2690307497978 MULTI CID FTMS 0 0 0 8757 149582.703125 0.624887679665212 -1 0.067291259765625 3 Unmodified _KESSTVFEL_ ENSG00000103363|ENST00000409906|ELOB;nc|ENSG00000103363|Q15370-2|ELOB 47.7319792270244 0.0453426645642791 6 [{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}V{M(Oxidation (M))|F}E{I|L} 8 5 + 54.328 0.0 0.0 5.2312 5.2312 78.355 0.0 0.0 0.0 1.7989247940391095 23.04831216012211 1.7989247940391095 2.1194096645135048 0 0.9361818737241734 0.0 1.6549471895720984 0.0 [{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}V{M(Oxidation (M))|F}E{I|L};{[QN]|[E{I|L}]|[KN]}NGTV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{[CA]|SS}{[SA]|[TG]}V{M(Oxidation (M))|F}E{I|L};[{M(Oxidation (M))|F}T]{[{M(Oxidation (M))|F}H]|[RQ]}VE{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{[CA]|SS}{[SA]|[TG]}VE{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}GGGTV{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{[CA]|SS}{M(Oxidation (M))|F}EKE{I|L};{[QN]|[E{I|L}]|[KN]}NY[Q{I|L}]{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}G[YT]EKE{I|L};[VP][YT]{[WN]|[YH]}{M(Oxidation (M))|F}{I|L} 5.2312;5.0272;4.895;4.5748;4.2386;4.1405;3.2228;3.178;3.0206;2.9735 -;-;-;-;-;-;-;-;-;- 838 1 1.499 122048.6 0.550000011920929 3174 5584 8757 SUDHL4_400M_050219_2,8760 SUDHL4_400M_050219_2,8760,KESSTVFEL True True KESSTVFEL 48.121269 520.269030749798 1049579.875 8757.0 nc|ENSG00000103363|Q15370-2|ELOB;;ENSG00000103363|ENST00000409906|ELOB 3.5938671429951987 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8761 48.133 704.0 125320.0 25 0 22328.0 + 1736 ALQEKLWNV 9 122 550.8084625205958 1099.6023721079914 2 550.8083373904228 MULTI CID FTMS 0 0 0 8757 87217.8984375 0.5938910864184869 -1 0.067291259765625 4 Unmodified _ALQEKLWNV_ ENSG00000149262|ENST00000534064|INTS4;ENST00000533180.1_1_11:77612465-77632469:-|nuORF 86.33184430468982 0.0159826143231117 6 [{I|L}A]QEK{I|L}WNV 9 0 + 66.793 0.0 0.0 6.0743 6.0743 84.522 0.0 0.0 0.0 5.303053800654126 5.303053800654126 5.303053800654126 5.303053800654126 0 2.173877368056628 2.0 0.5 1.1861818737241734 + + [{I|L}A]QEK{I|L}WNV;[{I|L}A]Q[VS]A{I|L}WNV;[{I|L}A]GAEK{I|L}WNV;[{I|L}A][AG]EK{I|L}WNV;[{I|L}A]GA[VS]A{I|L}WNV;[{I|L}A]Q[VS]A{I|L}{[DA]|[EG]}NV;[{I|L}A]QEK{I|L}{[DA]|[EG]}NV;[{I|L}A]QEK{I|L}WGGV;[{I|L}A]GAEK{I|L}{[DA]|[EG]}NV;[{I|L}A][VS]QA{I|L}WNV 6.0743;5.592;5.2891;5.2368;5.0961;4.7585;4.5653;4.5043;4.4556;4.4296 +;-;-;-;-;-;-;-;-;- + 1531 + 1 1.499 68797.7 1.0 3175 5584 8757 SUDHL4_400M_050219_2,8761 SUDHL4_400M_050219_2,8761,ALQEKLWNV True True ALQEKLWNV 48.133495 550.808337390423 711076.375 8757.0 ENSG00000149262|ENST00000534064|INTS4;;ENST00000533180.1_1_11:77612465-77632469:-|nuORF 7.183655261993408 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8763 48.142 347.0 117940.0 25 0 34921.0 + 42247 VSLYSKFIRIQ 11 61 677.3950512041706 1352.7755494751411 2 677.3953735232353 MULTI CID FTMS 0 0 0 8762 202129.0625 0.7037783695432431 3 -0.174530029296875 1 Unmodified _VSLYSKFIRIQ_ REV__ENST00000297857.3_1_8:124261623-124261725:-|nuORF 1.0714618166137932 0.8700927088084459 6 {M(Oxidation (M))|F} 1 -1 0.71334 0.0 0.0 0.052731 0.0 0.0 934.5541272112724 268.12494836978755 1202.67907558106 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.052731 + + 3 + 1 1.499 41790.2 1.0 3176 5585 8762 SUDHL4_400M_050219_2,8763 SUDHL4_400M_050219_2,8763,VSLYSKFIRIQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8764 48.145 141.0 401120.0 25 0 57234.0 + 1796 ALSNLEVKL 9 79 493.797603472246 0 493.7976562380791 PEAK CID FTMS 0 0 0 8762 389394.34375 1.0 0 0.0 2 Unmodified _ALSNLEVKL_ ENSG00000149781|ENST00000345728|FERMT3;ENST00000540957.1_1_11:63987010-63987876:+|nuORF;ENST00000541326.5_1_11:63979141-63987695:+|nuORF;ENST00000546255.1_1_11:63979177-63987262:+|nuORF;nc|ENSG00000149781|Q86UX7|FERMT3 38.17557092003332 0.0706864996250298 6 SN{I|L}EV 5 4 37.99 0.0 0.0 3.8545 0.0 0.0 184.11987886102423 256.1668490045532 440.2867278655774 0.0 0.0 0.0 0.0 0 0.7302046884880937 0.0 0.3252574989159953 0.4247425010840047 + SN{I|L}EV 3.8545 + + 125 + 1 1.499 48860.0 1.0 3177 5585 8762 SUDHL4_400M_050219_2,8764 SUDHL4_400M_050219_2,8764,ALSNLEVKL True True ALSNLEVKL 48.145177 493.797656238079 15153461.0 8762.0 nc|ENSG00000149781|Q86UX7|FERMT3;;ENST00000541326.5_1_11:63979141-63987695:+|nuORF;;ENST00000546255.1_1_11:63979177-63987262:+|nuORF;;ENST00000540957.1_1_11:63987010-63987876:+|nuORF;;ENSG00000149781|ENST00000345728|FERMT3 4.761504332224528 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8765 48.148 164.0 263670.0 25 0 30829.0 + 9670 FLQEGDLISA 10 77 546.7823839226568 1091.5502149121137 2 546.7831298708916 MULTI CID FTMS 0 0 0 8762 203748.78125 0.0937861337695162 -3 0.1492042541503906 3 Unmodified _FLQEGDLISA_ ENSG00000130713|ENST00000372358|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2 29.081581746732265 0.3152867722954398 6 {I|L}{M(Oxidation (M))|F}QE 4 8 19.329 0.0 0.0 1.7708 0.0 0.0 289.1672325896509 282.1097506158813 571.2769832055322 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.8494850021680094 {I|L}{M(Oxidation (M))|F}QE 1.7708 - 123 + 1 1.499 38342.6 1.0 3178 5585 8762 SUDHL4_400M_050219_2,8765 SUDHL4_400M_050219_2,8765,FLQEGDLISA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8766 48.153 233.0 240010.0 25 0 26578.0 + 33526 SILEDPPSI 9 88 485.7577085905546 0 485.7585327029228 PEAK CID FTMS 0 0 0 8762 166834.28125 0.8118470088681717 3 -0.174530029296875 4 Unmodified _SILEDPPSI_ ENSG00000064102|ENST00000261191|INTS13;nc|ENSG00000064102|Q9NVM9-2|INTS13 39.957323273325 0.0619271662220897 6 PPS 3 6 24.539 0.0 0.0 2.5311 0.0 0.0 557.2686611410071 128.0718935602172 685.3405547012243 0.0 0.0 0.0 0.0 0 0.5 0.0 1.174742501084005 0.0 + PPS 2.5311 + + 107 + 1 1.499 46488.7 1.0 3179 5585 8762 SUDHL4_400M_050219_2,8766 SUDHL4_400M_050219_2,8766,SILEDPPSI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8767 48.159 358.0 131810.0 25 0 23416.0 -1 LLFSLCLRK 9 74 575.345445891821 1148.676338850442 2 575.3454467654228 MULTI CID FTMS 0 0 0 8762 124605.4375 1.0 0 0.0 5 Carbamidomethyl (C) _LLFSLC(Carbamidomethyl (C))LRK_ ENST00000296666.12_1_5:126889918-126890026:+|nuORF 4.75600775471527 0.7486543447549536 6 D 1 -1 8.5392 0.0 0.0 0.74339 0.0 0.0 945.597204794581 85.03006159000233 1030.6272663845834 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3054621874040891 0.0 D 0.74339 - 17 + 1 1.499 39791.9 1.0 3180 5585 8762 SUDHL4_400M_050219_2,8767 SUDHL4_400M_050219_2,8767,LLFSLCLRK False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8768 48.168 483.0 175650.0 25 0 15578.0 33572 SILWVWVL 8 108 508.3018625351411 1014.5891721370822 2 508.3020202517509 MULTI CID FTMS 0 0 0 8762 128911.7109375 0.0214985569320627 17 -1.0417137145996094 6 Unmodified _SILWVWVL_ ENSG00000169715|ENST00000330439|MT1E 26.34127834903884 0.4900704351052977 6 AD{I|L} 3 7 39.253 0.0 0.0 3.8688 0.0 0.0 697.4489640935542 0.0 697.4489640935542 0.0 22.26280941356464 0.0 0.0 0 1.305462187404089 0.0 0.0 0.0 AD{I|L} 3.8688 - 162 1 1.499 69593.4 1.0 3181 5585 8762 SUDHL4_400M_050219_2,8768 SUDHL4_400M_050219_2,8768,SILWVWVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8769 48.182 800.0 160090.0 25 0 12825.0 + 34503 SMTLAIHEI 9 146 515.7647096393794 1029.5148663455586 2 515.7654296755791 MULTI CID FTMS 0 0 0 8762 121581.7109375 1.0 0 0.0 7 Oxidation (M) _SM(Oxidation (M))TLAIHEI_ ENSG00000143753|ENST00000323699|DEGS1 54.773552608820026 0.0299037012502309 6 [VP][NS]{I|L}A{I|L}T 8 7 33.194 0.0 0.0 3.2242 0.0 0.0 0.0 231.0446695278038 231.0446695278038 3.630856964109896 0.0 0.0 0.0 0 0.9247425010840048 0.585026652029182 1.0629529932484498 0.0 [VP][NS]{I|L}A{I|L}T 3.2242 - 1081 1 1.499 98529.2 0.5 3182 5585 8762 SUDHL4_400M_050219_2,8769 SUDHL4_400M_050219_2,8769,SMTLAIHEI True False SMTLAIHEI 48.181589 515.765429675579 465077.875 8762.0 ENSG00000143753|ENST00000323699|DEGS1 5.99070930480957 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8770 48.195 800.0 111340.0 25 0 7893.9 31691 RRLWKCILH 9 102 612.861026801941 1223.7075006706818 2 612.8613769412041 MULTI CID FTMS 0 0 0 8762 121958.90625 1.0 0 0.0 8 Unmodified _RRLWKCILH_ ENST00000535831.5_1_12:123319323-123319551:+|nuORF 4.5288652416199255 0.7565837746943351 6 {[QV]|[N{I|L}]|[RA]|[KV]}V 3 8 11.171 0.0 0.0 0.91287 0.0 0.0 0.0 894.4906176963256 894.4906176963256 2.136535415222717 0.0 0.0 0.0 0 0.0 1.2218487496163564 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}V 0.91287 - 41 1 1.499 70440.3 0.5299999713897705 3183 5585 8762 SUDHL4_400M_050219_2,8770 SUDHL4_400M_050219_2,8770,RRLWKCILH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8771 48.202 388.0 102170.0 25 0 11885.0 + 23653 TLTNVIHNL 9 79 512.2938466334132 1022.5731403336264 2 512.7942382693291 MULTI CID FTMS 0 0 0 8762 123404.9609375 0.2767568655377195 3 -0.174530029296875 9 Unmodified _LTRHRNLN_ ENSG00000123353|ENST00000243045|ORMDL2 14.581692164780916 0.6954967302934248 6 {[NV]|[RG]}T{[NV]|[RG]}{I|L}HN{I|L} 9 6 + 24.777 0.0 0.0 2.423 2.423 75.157 0.0 0.0 0.0 5.467495601134527 11.003997745237427 5.467495601134527 6.478174818886373 0 0.0 0.0 0.0 0.6694451763165201 {[NV]|[RG]}T{[NV]|[RG]}{I|L}HN{I|L};{[NV]|[RG]}[WK]{I|L}HN{I|L};{[NV]|[RG]}T{[NV]|[RG]}{I|L}HGG{I|L};{[NV]|[RG]}[WK]{I|L}HGG{I|L};{[NV]|[RG]}T[Y{I|L}][{I|L}T]S{I|L} 2.423;1.7894;1.2401;0.60133;0.52134 -;-;-;-;- 102 + 1 1.499 35887.3 1.0 3184 5585 8762 SUDHL4_400M_050219_2,8771 SUDHL4_400M_050219_2,8771,LTRHRNLN False False TLTNVIHNL 48.202385 512.794238269329 2363538.5 8762.0 ENSG00000123353|ENST00000243045|ORMDL2 4.976178169250488 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8772 48.211 469.0 131910.0 25 0 31674.0 + 30202 QVVLVLERPAW 11 71 655.3820952773966 1308.7496376215931 2 655.3823119997978 MULTI CID FTMS 0 0 0 8762 110344.6640625 0.1329445474851324 -6 0.3011817932128906 10 Unmodified _QVVLVLERPAW_ REV__ENSG00000168282|ENST00000305386|MGAT2 1.3295316138638542 0.8688751186870782 6 Y 1 -1 0.3786 0.0 0.0 0.028929 0.0 0.0 936.5712756604588 206.09064661197505 1142.661922272434 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.028929 - 2 + 1 1.499 63547.3 1.0 3185 5585 8762 SUDHL4_400M_050219_2,8772 SUDHL4_400M_050219_2,8772,QVVLVLERPAW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8773 48.215 146.0 241390.0 25 0 81157.0 20008 LILTHFPKFL 10 39 410.254576679731 1227.741900639393 3 410.2542602419853 MULTI CID FTMS 0 0 0 8762 99581.0703125 1.0 0 0.0 11 Unmodified _LILTHFPKFL_ ENSG00000108773|ENST00000225916|KAT2A;ENSG00000114166|ENST00000263754|KAT2B 6.723162845929126 0.6955379296933136 6 {I|L} 1 9 11.99 0.0 0.0 0.97657 0.0 0.0 1096.6470042544304 0.0 1096.6470042544304 0.0 5.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.97657 + + 11 + 1 1.499 36333.1 1.0 3186 5585 8762 SUDHL4_400M_050219_2,8773 SUDHL4_400M_050219_2,8773,LILTHFPKFL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8775 48.233 800.0 148160.0 25 0 18308.0 23065 LSLLGVNYPLS 11 123 588.3355217626658 1174.6564905921316 2 588.3356811404228 MULTI CID FTMS 0 0 0 8774 114307.6875 0.5309206054491469 2 -0.09295654296875 1 Unmodified _LSLLGVNYPLS_ ENSG00000161992|ENST00000409413|PRR35 5.296884461304476 0.8501568894076437 6 {I|L} 1 10 8.9258 0.0 0.0 0.75986 0.0 0.0 1043.5617162774815 0.0 1043.5617162774815 0.0 1.9360807164013227 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.75986 + + 110 + 1 1.499 94483.0 0.6000000238418579 3187 5586 8774 SUDHL4_400M_050219_2,8775 SUDHL4_400M_050219_2,8775,LSLLGVNYPLS False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8776 48.247 800.0 258180.0 25 0 19199.0 -1 0 153 1035.1612320069607 3102.4618666210827 3 1035.498583972454 MULTI CID FTMS 0 0 0 8774 239516.296875 0.3471765783727694 -1 0.081573486328125 2 6 D{[SA]|[TG]}NVMEN 8 -1 60.126 0.0 0.0 1.938 0.0 0.0 2224.044947034308 0.0 2224.044947034308 0.0 4.805817868291697 0.0 0.0 0 0.5 0.0 0.4247425010840047 1.274227503252014 D{[SA]|[TG]}NVMEN 1.938 - 24532 1 1.499 141298.6 0.5699999928474426 3188 5586 8774 SUDHL4_400M_050219_2,8776 SUDHL4_400M_050219_2,8776, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8777 48.26 800.0 153390.0 25 0 40163.0 18853 LASPHSPIL 9 128 467.771545902915 933.52853887263 2 467.7711364626884 MULTI CID FTMS 0 0 0 8774 119820.3984375 0.5283280717585923 -1 0.081573486328125 3 Unmodified _LASPHSPIL_ ENST00000372870.5_1_9:131122965-131123439:+|nuORF 44.40701690623563 0.0526327925666318 6 [{I|L}T][PG]HPS{I|L}{I|L} 9 4 + 56.137 0.0 0.0 6.0134 6.0134 79.812 0.0 0.0 0.0 1.4093282777197658 16.478174818886373 1.4093282777197658 1.4093282777197658 0 0.9247425010840048 1.3010299956639813 1.278659694992122 0.0 [{I|L}T][PG]HPS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}S[{I|L}A]PS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SPV[TA]{I|L}{I|L};[{I|L}A][PS]HPS{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}SP[{I|L}A]S{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V[TA]PS{I|L}{I|L};[VP][TA]HPS{I|L}{I|L};[{I|L}T]TCV[TA]{I|L}{I|L};[{I|L}T]TC[{I|L}A]S{I|L}{I|L};[VP]H[TA]PS{I|L}{I|L} 6.0134;5.8624;5.2359;5.1671;5.1321;4.8586;4.6442;4.1784;4.0746;3.9563 -;-;-;-;-;-;-;-;-;- 1197 1 1.499 100102.1 0.4199999868869781 3189 5586 8774 SUDHL4_400M_050219_2,8777 SUDHL4_400M_050219_2,8777,LASPHSPIL True False HPSPSLALI 48.260466 467.771136462688 1333889.875 8774.0 ENST00000577286.5_1_17:79993838-79994415:-|nuORF;;ENST00000580750.5_1_17:79994229-79994415:-|nuORF 3.444281021753947 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8778 48.274 800.0 172120.0 25 0 34612.0 + 10485 FTQDSNYLL 9 149 550.7669282853032 1099.5193036374062 2 550.7667724490166 MULTI CID FTMS 0 0 0 8774 103745.2890625 0.5693924049894761 -1 0.081573486328125 4 Unmodified _FTQDSNYLL_ ENSG00000023734|ENST00000419869|STRAP;nc|ENSG00000023734|Q9Y3F4-2|STRAP 81.89019881105858 0.0170587746866453 6 [{M(Oxidation (M))|F}T]QDSNY{I|L}{I|L} 9 0 + 54.961 0.0 0.0 4.9986 4.9986 77.451 0.0 0.0 0.0 2.169533428541257 7.601358442548474 2.169533428541257 2.169533428541257 0 0.7742275032520141 0.0 1.948104871308642 0.7614393726401688 + + [{M(Oxidation (M))|F}T]QDSNY{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}T{M(Oxidation (M))|F}SNY{I|L}{I|L};[NS]YDVNY{I|L}{I|L};[NS]DYVNY{I|L}{I|L};[{M(Oxidation (M))|F}T][AG]DSNY{I|L}{I|L};[{M(Oxidation (M))|F}T]QDSGGY{I|L}{I|L};[QT]{M(Oxidation (M))|F}DSNY{I|L}{I|L};[QT]D{M(Oxidation (M))|F}SNY{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}T{M(Oxidation (M))|F}SGGY{I|L}{I|L};[NS]YDVGGY{I|L}{I|L} 4.9986;4.8013;4.6364;4.2024;4.1612;4.1612;4.1234;4.121;3.9639;3.7989 +;-;-;-;-;-;-;-;-;- + 1575 1 1.499 103801.7 0.3799999952316284 3190 5586 8774 SUDHL4_400M_050219_2,8778 SUDHL4_400M_050219_2,8778,FTQDSNYLL True True FTQDSNYLL 48.274297 550.766772449017 1064038.75 8774.0 nc|ENSG00000023734|Q9Y3F4-2|STRAP;;ENSG00000023734|ENST00000419869|STRAP 5.894986470540364 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8779 48.288 800.0 211430.0 25 0 29873.0 + 44120 YLDEYIARM 9 121 595.2810452390173 1188.5475375448343 2 595.2812988162041 MULTI CID FTMS 0 0 0 8774 102119.7734375 0.597368400848131 -1 0.081573486328125 5 Oxidation (M) _YLDEYIARM(Oxidation (M))_ ENSG00000103197|ENST00000219476|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-4|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-7|TSC2 78.7280429016045 0.0178249292250809 6 Y{I|L}DEY{I|L}AR{M(Oxidation (M))|F} 9 0 + 107.43 0.0 0.0 9.039 9.039 98.723 0.0 0.0 0.0 72.03910640684605 11.962724883926654 11.962724883926654 45.33932200095428 0 1.274227503252014 2.0 0.7614393726401688 0.5752574989159953 + + Y{I|L}DEY{I|L}AR{M(Oxidation (M))|F};YEYEV{I|L}AR{M(Oxidation (M))|F};Y{I|L}{M(Oxidation (M))|F}[KQ]{[MG]|[TS]}R{M(Oxidation (M))|F};Y[{M(Oxidation (M))|F}V][C(Carbamidomethyl (C))N]{I|L}AR{M(Oxidation (M))|F};YK[DN]Y{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L};YK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[MD]AR{M(Oxidation (M))|F};YK{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}E{[MG]|[TS]}R{M(Oxidation (M))|F} 9.039;5.2243;4.3706;2.5935;2.4475;1.7521;1.0352 +;-;-;-;-;-;- + 1211 + 1 1.499 126845.2 0.3700000047683716 3191 5586 8774 SUDHL4_400M_050219_2,8779 SUDHL4_400M_050219_2,8779,YLDEYIARM True False YLDEYIARM 48.28814 595.281298816204 967541.0 8774.0 nc|ENSG00000103197|P49815-2|TSC2;;nc|ENSG00000103197|P49815-3|TSC2;;nc|ENSG00000103197|P49815-5|TSC2;;nc|ENSG00000103197|P49815-4|TSC2;;ENSG00000103197|ENST00000219476|TSC2;;nc|ENSG00000103197|P49815-7|TSC2;;nc|ENSG00000103197|P49815-6|TSC2 7.119099775950114 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8781 48.294 179.0 302200.0 25 0 44345.0 + 11461 SHVAVENALGLD 12 71 633.3691319727506 1264.723711012301 2 633.3689453005791 MULTI CID FTMS 0 0 0 8780 215270.4375 0.2014588234798672 11 -0.7061805725097656 1 Unmodified _GIFRGTRFRR_ ENST00000480592.5_1_X:41193505-41196960:+|nuORF;nc|ENSG00000215301|O00571-2|DDX3X;ENSG00000215301|ENST00000644876|DDX3X 3.944395688203298 0.708391353636983 6 {[YC]|[HE]}VAVENA{I|L}G 10 10 57.44 0.0 0.0 4.5417 0.0 0.0 0.0 242.1986318643289 242.1986318643289 46.95554701812867 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.3807196863200844 {[YC]|[HE]}VAVENA{I|L}G 4.5417 - 134 1 1.499 49156.1 1.0 3192 5587 8780 SUDHL4_400M_050219_2,8781 SUDHL4_400M_050219_2,8781,GIFRGTRFRR False False SHVAVENALGLD 48.294188 633.368945300579 1038762.5625 8780.0 ENST00000480592.5_1_X:41193505-41196960:+|nuORF;;nc|ENSG00000215301|O00571-2|DDX3X;;ENSG00000215301|ENST00000644876|DDX3X 9.12964407602946 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8782 48.308 800.0 115520.0 25 0 12108.0 + 9539 FIINGIEKV 9 109 516.3139620750118 1030.6133712168237 2 516.8083984255791 MULTI CID FTMS 0 0 0 8780 87590.6953125 0.1182276558598968 -5 0.3038597106933594 2 Unmodified _FLGEILARL_ nc|ENSG00000125630|Q9H9Y6-3|POLR1B;nc|ENSG00000125630|Q9H9Y6-5|POLR1B;ENSG00000125630|ENST00000263331|POLR1B;nc|ENSG00000125630|Q9H9Y6-2|POLR1B 13.50788311687929 0.4710407108020397 6 E{[VA]|[{I|L}G]}N{I|L}{I|L}K 7 5 38.448 0.0 0.0 3.7306 0.0 0.0 245.17444045234527 0.0 245.17444045234527 0.0 19.23471040309373 0.0 0.0 0 0.4247425010840047 0.0 0.8494850021680094 0.3494850021680094 E{[VA]|[{I|L}G]}N{I|L}{I|L}K 3.7306 - 292 1 1.499 74666.5 0.4199999868869781 3193 5587 8780 SUDHL4_400M_050219_2,8782 SUDHL4_400M_050219_2,8782,FLGEILARL False False FIINGIEKV 48.30802 516.808398425579 714157.6875 8780.0 nc|ENSG00000125630|Q9H9Y6-3|POLR1B;;nc|ENSG00000125630|Q9H9Y6-5|POLR1B;;ENSG00000125630|ENST00000263331|POLR1B;;nc|ENSG00000125630|Q9H9Y6-2|POLR1B 5.0441774527231855 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8784 48.318 314.0 252730.0 25 0 18155.0 -1 0 86 975.4610813126787 1948.9076096921576 2 975.464892566204 MULTI CID FTMS 0 0 0 8783 276771.9375 0.5960751401651527 -1 0.0198745727539062 1 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}DPNADQ[WK]HHQ{[TV]|[{I|L}S]} 16 -1 + 52.961 0.0 0.0 2.7175 2.7175 75.988 0.0 0.0 0.0 16.494656131962365 7.452204513875195 7.452204513875195 6.709412807357751 0 0.5 0.0 0.8807196863200843 1.079689690656103 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}DPNADQ[WK]HHQ{[TV]|[{I|L}S]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}DPNWQ[WK]HHQ{[TV]|[{I|L}S]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}DPNADQ[WH][HK]Q{[TV]|[{I|L}S]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}DNPADQ[WK]HHQ{[TV]|[{I|L}S]};[NP]{I|L}N{M(Oxidation (M))|F}[{I|L}A][RH]DANPD{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}N[{I|L}P]MHANPD{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}N[{I|L}P]N[PG]ANPD{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]VQ{M(Oxidation (M))|F}[{I|L}A][RH]DANPD{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}DPNWQ[WH][HK]Q{[TV]|[{I|L}S]};[NP]{I|L}NW{[RE]|[WV]}MHANPD{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]} 2.7175;2.3732;2.3182;2.2773;2.1963;2.0513;2.0278;2.0075;1.9739;1.9372 -;-;-;-;-;-;-;-;-;- 3695 + 1 1.499 58778.8 1.0 3194 5588 8783 SUDHL4_400M_050219_2,8784 SUDHL4_400M_050219_2,8784, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8785 48.32 108.0 367150.0 25 0 35857.0 + 29478 QLIRSPTIS 9 65 507.8009517510558 0 507.8010131716728 PEAK CID FTMS 0 0 0 8783 305236.75 0.6686604126952963 -1 0.0198745727539062 2 Unmodified _QLIRSPTIS_ REV__ENSG00000117448|ENST00000351829|AKR1A1;REV__ENST00000473038.5_1_1:46033610-46035625:+|nuORF;REV__ENST00000487654.5_1_1:46033819-46034819:+|nuORF 19.256988751693697 0.2078072434435185 6 {I|L} 1 -1 10.044 0.0 0.0 0.99097 0.0 0.0 241.1439872903412 656.3373986147075 897.4813859050487 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {I|L} 0.99097 + + 14 + 1 1.499 37122.2 1.0 3195 5588 8783 SUDHL4_400M_050219_2,8785 SUDHL4_400M_050219_2,8785,QLIRSPTIS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8786 48.324 186.0 280670.0 25 0 67958.0 + 33728 SLADIAQKL 9 79 479.7819084655076 957.5492639978152 2 479.7819702029228 MULTI CID FTMS 0 0 0 8783 271097.59375 0.5232421469403555 -1 0.0198745727539062 3 Unmodified _SLADIAQKL_ ENSG00000108344|ENST00000264639|PSMD3;ENST00000415039.7_1_17:38140716-38152959:+|nuORF;ENST00000485835.1_1_17:38151035-38151804:+|nuORF;nc|ENSG00000108344|O43242-2|PSMD3 38.17557092003332 0.0854718145212029 6 {[TV]|[{I|L}S]}AD{I|L}AQK{I|L} 9 0 + 73.207 0.0 0.0 7.6453 7.6453 92.46 0.0 0.0 0.0 60.27550329074565 10.325930211995 10.325930211995 9.208187539523747 0 1.1382104921644451 2.0 0.0 0.3494850021680094 + + {[TV]|[{I|L}S]}AD{I|L}AQK{I|L};{[TV]|[{I|L}S]}AD{I|L}A[AG]K{I|L};{[TV]|[{I|L}S]}A[KS][DP]K{I|L} 7.6453;6.6836;3.4664 +;-;- + 264 + 1 1.499 46340.2 1.0 3196 5588 8783 SUDHL4_400M_050219_2,8786 SUDHL4_400M_050219_2,8786,SLADIAQKL True True SLADIAQKL 48.323536 479.781970202923 2584679.5 8783.0 ENST00000415039.7_1_17:38140716-38152959:+|nuORF;;ENST00000485835.1_1_17:38151035-38151804:+|nuORF;;ENSG00000108344|ENST00000264639|PSMD3;;nc|ENSG00000108344|O43242-2|PSMD3 6.608578523000081 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8787 48.329 281.0 293520.0 25 0 20658.0 + 31276 RLWPKIQGL 9 93 555.8427019646269 1109.6708509960538 2 555.8427001833916 MULTI CID FTMS 0 0 0 8783 258118.578125 0.2761934176455336 -3 0.174530029296875 4 Unmodified _RLWPKIQGL_ ENSG00000168209|ENST00000307365|DDIT4 37.97399986684836 0.0865783450051559 6 {[VA]|[{I|L}G]}A[{I|L}T]PK{I|L} 8 6 34.456 0.0 0.0 3.1051 0.0 0.0 0.0 313.1513341447491 313.1513341447491 15.498682207454763 0.0 0.0 0.0 0 0.8494850021680094 1.2218487496163564 0.4247425010840047 0.0 {[VA]|[{I|L}G]}A[{I|L}T]PK{I|L} 3.1051 - 139 1 1.499 65899.6 1.0 3197 5588 8783 SUDHL4_400M_050219_2,8787 SUDHL4_400M_050219_2,8787,RLWPKIQGL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8788 48.331 132.0 215960.0 25 0 26164.0 + -1 SIASGGFMAL 10 56 485.23897846654063 968.4634039998812 2 485.2390624880791 MULTI CID FTMS 0 0 0 8783 233678.8125 1.0 0 0.0 5 Oxidation (M) _FQSSAVM(Oxidation (M))AL_ nc|ENSG00000036054|Q9NUY8-2|TBC1D23;ENST00000486274.5_1_3:99980342-100042509:+|nuORF;ENSG00000036054|ENST00000394144|TBC1D23 23.1484247019978 0.2366544122328345 6 {M(Oxidation (M))|F}A{I|L} 3 -1 21.031 0.0 0.0 2.1716 0.0 0.0 619.295295944997 0.0 619.295295944997 0.0 9.248032187880124 0.0 0.0 0 0.5 0.0 0.0 0.0 {M(Oxidation (M))|F}A{I|L} 2.1716 + + 41 + 1 1.499 27415.7 1.0 3198 5588 8783 SUDHL4_400M_050219_2,8788 SUDHL4_400M_050219_2,8788,FQSSAVMAL False False SIASGGFMAL 48.331396 485.239062488079 1393154.0 8783.0 nc|ENSG00000036054|Q9NUY8-2|TBC1D23;;ENST00000486274.5_1_3:99980342-100042509:+|nuORF;;ENSG00000036054|ENST00000394144|TBC1D23 1.164594014485677 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8789 48.341 529.0 103840.0 25 0 27579.0 + 20108 LKERLQLANNK 11 74 663.8953336984475 1325.776114463695 2 663.8953735232353 MULTI CID FTMS 0 0 0 8783 190481.25 0.7181678413644835 -3 0.174530029296875 6 Unmodified _LKERLQLANNK_ REV__ENSG00000091128|ENST00000388781|LAMB4;REV__nc|ENSG00000091128|A4D0S4-3|LAMB4 2.735195868890462 0.8622431031272658 6 W 1 -1 5.4846 0.0 0.0 0.41369 0.0 0.0 662.3907517701388 474.2857760065063 1136.6765277766451 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.41369 - 6 + 1 1.499 57036.6 1.0 3199 5588 8783 SUDHL4_400M_050219_2,8789 SUDHL4_400M_050219_2,8789,LKERLQLANNK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8790 48.349 441.0 136690.0 25 0 12822.0 -1 ENLLQTGMY 9 104 542.7511977940665 1083.4878426549328 2 542.7512695193291 MULTI CID FTMS 0 0 0 8783 128600.9609375 1.0 0 0.0 7 Oxidation (M) _ENLLQTGM(Oxidation (M))Y_ ENST00000560658.5_1_15:31369125-31393866:-|nuORF 17.11289562659939 0.3734572693229295 6 [Q{I|L}]D{I|L}QVW 7 -1 45.797 0.0 0.0 4.2268 0.0 0.0 0.0 198.00673848917032 198.00673848917032 28.605356659695435 0.0 0.0 0.0 0 0.0 0.5376020021010439 0.3494850021680094 0.9715141619232908 [Q{I|L}]D{I|L}QVW 4.2268 - 490 1 1.499 52114.6 1.0 3200 5588 8783 SUDHL4_400M_050219_2,8790 SUDHL4_400M_050219_2,8790,ENLLQTGMY False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8791 48.362 800.0 138580.0 25 0 9983.0 -1 0 102 981.9692340231976 1961.923915113195 2 981.9718505740166 MULTI CID FTMS 0 0 0 8783 125320.796875 0.7243038609341962 -2 0.09295654296875 8 6 [NP]{I|L}[TP]QV{[QG]|[NA]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 18 -1 + 69.194 0.0 0.0 3.5269 3.5269 71.133 0.0 0.0 0.0 4.648867983026506 6.483259264971153 4.648867983026506 0.9691001300805624 0 1.424742501084005 0.9208187539523752 0.3054621874040891 0.4247425010840047 [NP]{I|L}[TP]QV{[QG]|[NA]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N[TP]{I|L}{[QG]|[NA]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}[TP]N{I|L}{[QG]|[NA]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}NWK[Y{M(Oxidation (M))|F}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}P[TP]QV{[QG]|[NA]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PN[TP]{I|L}{[QG]|[NA]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]VQ[TP]{I|L}{[QG]|[NA]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]V[DP]KV{[QG]|[NA]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}P[TP]N{I|L}{[QG]|[NA]}QAEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}PNWK[Y{M(Oxidation (M))|F}]AEN{I|L}NP{[QD]|[EN]|[WG]|[KD]|[RS]} 3.5269;3.4775;3.324;3.3225;3.2899;3.2405;3.2002;3.1598;3.0871;3.0856 -;-;-;-;-;-;-;-;-;- 2401 1 1.499 78566.5 0.959999978542328 3201 5588 8783 SUDHL4_400M_050219_2,8791 SUDHL4_400M_050219_2,8791, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8792 48.372 552.0 107070.0 25 0 15569.0 16639 KEILQNYFLK 10 72 648.3740745464576 1294.733596159715 2 648.3740112185478 MULTI CID FTMS 0 0 0 8783 113622.4375 0.6576579721574327 -2 0.09295654296875 9 Unmodified _KEILQNYFLK_ ENSG00000155754|ENST00000439140|C2CD6 2.9952420565917617 0.7127817445270067 6 M 1 10 1.9897 0.0 0.0 0.15368 0.0 0.0 552.3330407735942 608.3473459225473 1160.6803866961416 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.15368 - 5 + 1 1.499 55676.3 1.0 3202 5588 8783 SUDHL4_400M_050219_2,8792 SUDHL4_400M_050219_2,8792,KEILQNYFLK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8793 48.379 394.0 103490.0 25 0 10465.0 + 32591 SAVGHVFSL 9 74 458.74814115111127 915.4817293690226 2 458.7477294802666 MULTI CID FTMS 0 0 0 8783 103573.71875 0.9931257314107614 1 -0.0803375244140625 10 Unmodified _SAVGHVFSL_ ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA;nc|ENSG00000164944|Q69YN4-3|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA 15.847184025352805 0.4077185912009129 6 {[HG]|PP}VV{M(Oxidation (M))|F} 5 6 15.229 0.0 0.0 1.6635 0.0 0.0 0.0 373.1740871173226 373.1740871173226 1.249387366082999 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {[HG]|PP}VV{M(Oxidation (M))|F} 1.6635 - 63 1 1.499 36981.0 1.0 3203 5588 8783 SUDHL4_400M_050219_2,8793 SUDHL4_400M_050219_2,8793,SAVGHVFSL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8794 48.388 452.0 74391.0 25 0 7111.7 + -1 VLFSSPPQM 9 69 511.2545955479322 1020.4946381626644 2 511.2556640505791 MULTI CID FTMS 0 0 0 8783 103836.71875 0.4529158483164852 7 -0.4711723327636719 11 Oxidation (M) _VLFSSPPQM(Oxidation (M))_ ENSG00000104738|ENST00000649973|MCM4 23.1484247019978 0.2366544122328345 6 PPQ{M(Oxidation (M))|F} 4 -1 19.456 0.0 0.0 1.9066 0.0 0.0 533.2852127417926 0.0 533.2852127417926 0.0 8.036336708273115 0.0 0.0 0 0.0 0.0 0.0 0.5 PPQ{M(Oxidation (M))|F} 1.9066 + + 57 + 1 1.499 29661.7 1.0 3204 5588 8783 SUDHL4_400M_050219_2,8794 SUDHL4_400M_050219_2,8794,VLFSSPPQM False False VLFSSPPQM 48.388365 511.255664050579 2045255.5 8783.0 ENSG00000104738|ENST00000649973|MCM4 6.500705242156982 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8796 48.406 800.0 40320.0 25 0 7293.4 -1 0 43 1016.142338520698 3045.405186162294 3 1016.807482898235 MULTI CID FTMS 0 0 0 8795 44676.875 0.1902795785249972 6 -0.3908348083496094 1 6 G 1 -1 6.9897 0.0 0.0 0.22952 0.0 0.0 1823.34583993447 1162.0154512994752 2985.361291233945 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.22952 - 6 + 1 1.499 31363.0 0.4099999964237213 3205 5589 8795 SUDHL4_400M_050219_2,8796 SUDHL4_400M_050219_2,8796, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8797 48.41 175.0 354390.0 25 0 42395.0 + 20324 LLEPFVHQV 9 85 541.3085650272941 1080.602577121388 2 541.3060180544853 MULTI CID FTMS 0 0 0 8795 241684.78125 0.540018178163176 -8 0.478790283203125 2 Unmodified _LLEVHLMNI_ nc|ENSG00000068745|Q9UHH9-5|IP6K2;nc|ENSG00000068745|Q9UHH9-3|IP6K2;nc|ENSG00000068745|Q9UHH9-4|IP6K2;nc|ENSG00000068745|Q9UHH9-2|IP6K2;nc|ENSG00000068745|Q9UHH9-6|IP6K2;ENSG00000068745|ENST00000328631|IP6K2 25.399314129420983 0.2080152500878129 6 {I|L}{I|L}EP{M(Oxidation (M))|F}VHN{I|L} 9 4 + 61.754 0.0 0.0 5.7148 5.7148 89.581 0.0 0.0 0.0 33.26615076371674 13.773043837969324 13.773043837969324 13.443350238481033 0 0.3807196863200844 2.0 0.5 0.5356668758921829 {I|L}{I|L}EP{M(Oxidation (M))|F}VHN{I|L};{I|L}{I|L}EV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HN{I|L};{I|L}{I|L}EP{M(Oxidation (M))|F}VHGG{I|L};{I|L}{I|L}E[KG]{[SA]|[TG]}HN{I|L};{I|L}{I|L}EPR[YK]Y;{I|L}{I|L}EV{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}HGG{I|L};{I|L}{I|L}[{M(Oxidation (M))|F}V][EP]HN{I|L};{I|L}{I|L}EAA[HC]V{I|L}{I|L};{I|L}{I|L}EVE[WP][VP];{I|L}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}A{[SA]|[TG]}HN{I|L} 5.7148;4.4707;4.3669;3.7135;3.602;3.4463;3.2389;2.911;2.8873;2.804 -;-;-;-;-;-;-;-;-;- 532 + 1 1.499 51994.9 1.0 3206 5589 8795 SUDHL4_400M_050219_2,8797 SUDHL4_400M_050219_2,8797,LLEVHLMNI False False LLEPFVHQV 48.409517 541.306018054485 1699824.875 8795.0 nc|ENSG00000068745|Q9UHH9-5|IP6K2;;nc|ENSG00000068745|Q9UHH9-3|IP6K2;;nc|ENSG00000068745|Q9UHH9-4|IP6K2;;nc|ENSG00000068745|Q9UHH9-2|IP6K2;;nc|ENSG00000068745|Q9UHH9-6|IP6K2;;ENSG00000068745|ENST00000328631|IP6K2 7.498735586802165 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8798 48.422 724.0 119580.0 25 0 15328.0 + 2729 ATIDPDTISAL 11 129 558.7926803399926 1115.570807746785 2 558.7935058474541 MULTI CID FTMS 0 0 0 8795 113325.140625 0.6920591539614058 -1 0.0803375244140625 3 Unmodified _ATIDPDTISAL_ ENSG00000166478|ENST00000396602|ZNF143;nc|ENSG00000166478|P52747-2|ZNF143;nc|ENSG00000166478|P52747-3|ZNF143 39.94969957227396 0.2131707853268865 6 [DP]TD{I|L}AT 7 7 34.914 0.0 0.0 3.1297 0.0 0.0 0.0 399.2229857214107 399.2229857214107 1.460375765055275 0.0 0.0 0.0 0 0.0 0.0 1.6989700043360187 0.0 [DP]TD{I|L}AT 3.1297 - 3152 1 1.499 71041.0 1.0 3207 5589 8795 SUDHL4_400M_050219_2,8798 SUDHL4_400M_050219_2,8798,ATIDPDTISAL False True ATIDPDTISAL 48.422081 558.793505847454 1016660.75 8795.0 nc|ENSG00000166478|P52747-3|ZNF143;;nc|ENSG00000166478|P52747-2|ZNF143;;ENSG00000166478|ENST00000396602|ZNF143 3.088322162628174 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8799 48.434 672.0 230470.0 25 0 20312.0 + 23827 LVFTDRAKRR 10 124 421.2557692850727 1260.7454784554182 3 421.2562133669853 MULTI CID FTMS 0 0 0 8795 80923.734375 0.1384316659369702 -2 0.1002120971679687 4 Unmodified _LVFTDRAKRR_ REV__ENSG00000196155|ENST00000379344|PLEKHG4;REV__ENST00000563969.5_1_16:67314567-67322708:+|nuORF;REV__nc|ENSG00000196155|Q58EX7-2|PLEKHG4 21.53697664764585 0.484802182336468 6 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 -1 + 121.88 0.0 0.0 9.6673 9.6673 93.381 0.0 0.0 0.0 93.03075857927531 25.255762612236907 25.255762612236907 9.164539485499247 0 0.7902877273156861 2.0 0.0 1.885151878060192 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR 9.6673;8.9404 -;- 821 + 1 1.499 135370.8 1.0 3208 5589 8795 SUDHL4_400M_050219_2,8799 SUDHL4_400M_050219_2,8799,LVFTDRAKRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8800 48.445 660.0 96267.0 25 0 8430.8 + + 16861 KLWADRISL 9 97 551.3251034121357 1100.6356538910711 2 551.3247558474541 MULTI CID FTMS 0 0 0 8795 86152.4140625 1.0 0 0.0 5 Unmodified _KIFAPHYIL_ ENSG00000168538|ENST00000334690|TRAPPC11;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;nc|ENSG00000168538|Q7Z392-3|TRAPPC11 19.438996006549623 0.310492472477042 6 K{I|L}WAD[YK]{I|L} 8 -1 47.568 0.0 0.0 4.3219 0.0 0.0 0.0 80.05120264224843 80.05120264224843 34.8037685459985 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 K{I|L}WAD[YK]{I|L} 4.3219 - 122 + 1 1.499 54926.4 1.0 3209 5589 8795 SUDHL4_400M_050219_2,8800 SUDHL4_400M_050219_2,8800,KIFAPHYIL False False KLWADRISL 48.445258 551.324755847454 396290.4375 8795.0 ENSG00000168538|ENST00000334690|TRAPPC11;;nc|ENSG00000168538|Q7Z392-4|TRAPPC11;;nc|ENSG00000168538|Q7Z392-3|TRAPPC11 4.1812582810719805 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8801 48.459 800.0 175940.0 25 0 34002.0 -1 0 46 843.124560389635 3368.46913569214 4 843.3764526247978 MULTI CID FTMS 0 0 0 8795 146954.171875 1.0 0 0.0 6 6 Q 1 -1 1.9897 0.0 0.0 0.059068 0.0 0.0 2414.2704185063963 823.1017550104124 3237.3721735168087 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.059068 - 3 + 1 1.499 105516.1 0.5299999713897705 3210 5589 8795 SUDHL4_400M_050219_2,8801 SUDHL4_400M_050219_2,8801, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8802 48.465 344.0 151230.0 25 0 11209.0 -1 TLAVTDICI 9 86 503.2663844038708 1004.5182158745416 2 503.2668029665947 MULTI CID FTMS 0 0 0 8795 108484.3984375 1.0 0 0.0 7 Carbamidomethyl (C) _TLAVTDIC(Carbamidomethyl (C))I_ ENSG00000174485|ENST00000443035|DENND4A;ENST00000568515.1_1_15:66007788-66048788:-|nuORF;nc|ENSG00000174485|Q7Z401-2|DENND4A;nc|ENSG00000174485|Q7Z401|DENND4A 23.1484247019978 0.2366544122328345 6 [YQ]D{I|L}G[VP][{I|L}T] 9 -1 + 26.985 0.0 0.0 2.6863 2.6863 82.835 0.0 0.0 0.0 2.7887785644744447 5.374015516889376 2.7887785644744447 26.98470379211543 0 0.8494850021680094 0.0 0.0 0.3807196863200844 [YQ]D{I|L}G[VP][{I|L}T] 2.6863 - 164 1 1.499 44812.4 1.0 3211 5589 8795 SUDHL4_400M_050219_2,8802 SUDHL4_400M_050219_2,8802,TLAVTDICI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8804 48.471 54.0 393070.0 25 0 67563.0 + 9671 FLQEGDLISA 10 40 546.7823839226568 1091.5502149121137 2 546.7822753787041 MULTI CID FTMS 0 0 0 8803 675263.0625 0.310825475964599 2 -0.1230278015136718 1 Unmodified _FLQEGDLISA_ ENSG00000130713|ENST00000372358|EXOSC2;nc|ENSG00000130713|Q13868-3|EXOSC2 18.1463463914782 0.5430639438673815 6 SA 2 8 13.583 0.0 0.0 1.2444 0.0 0.0 915.4703789519556 0.0 915.4703789519556 0.0 -2.614393726401687 -2.614393726401687 0.0 0 0.0 0.0 0.2614393726401688 0.0 + SA 1.2444 + + 14 + 1 1.499 21669.8 1.0 3212 5590 8803 SUDHL4_400M_050219_2,8804 SUDHL4_400M_050219_2,8804,FLQEGDLISA False True FLQEGDLISA 48.470612 546.782275378704 11459566.0 8803.0 ENSG00000130713|ENST00000372358|EXOSC2;;nc|ENSG00000130713|Q13868-3|EXOSC2 4.857387860616048 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8805 48.472 78.0 450770.0 25 0 123120.0 26570 NVLKSIINVYF 11 61 655.3820952773966 1308.7496376215931 2 655.3823119997978 MULTI CID FTMS 0 0 0 8803 688597.75 0.8296306581818803 -1 0.07696533203125 2 Unmodified _NVLKSIINVYF_ ENST00000378535.4_1_12:88888944-88889016:-|nuORF 2.498486711656943 0.8633599123570009 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.499 42571.8 1.0 3213 5590 8803 SUDHL4_400M_050219_2,8805 SUDHL4_400M_050219_2,8805,NVLKSIINVYF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8806 48.475 128.0 447550.0 25 0 84240.0 23955 LVRRMLML 8 65 516.3139620750118 1030.6133712168237 2 516.3142578005791 MULTI CID FTMS 0 0 0 8803 455000.65625 0.3505323365132541 -2 0.1573028564453125 3 Unmodified _LVRRMLML_ ENSG00000147044|ENST00000378163|CASK;ENST00000486402.1_1_X:41519640-41524682:-|nuORF;nc|ENSG00000147044|O14936-2|CASK;nc|ENSG00000147044|O14936-3|CASK;nc|ENSG00000147044|O14936-4|CASK;nc|ENSG00000147044|O14936-6|CASK 9.347437153973935 0.7675937258251505 6 [{I|L}V]Y 3 6 30.942 0.0 0.0 3.0023 0.0 0.0 0.0 652.3799827442446 652.3799827442446 27.84318117920506 0.0 0.0 0.0 0 0.3494850021680094 1.6989700043360187 0.0 0.0 [{I|L}V]Y 3.0023 - 4 + 1 1.499 48140.1 1.0 3214 5590 8803 SUDHL4_400M_050219_2,8806 SUDHL4_400M_050219_2,8806,LVRRMLML False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8807 48.483 428.0 185670.0 25 0 47825.0 + 14747 ILDDSHLLV 9 72 512.7875963724047 1023.5606398116092 2 512.7875854372978 MULTI CID FTMS 0 0 0 8803 178312.5 0.934880325979302 -1 0.07696533203125 4 Unmodified _ILDDSHLLV_ ENSG00000021776|ENST00000156471|AQR 60.07390631473393 0.0260411565414776 6 {I|L}{I|L}DDSH{I|L}{I|L}V 9 0 + 49.026 0.0 0.0 4.7898 4.7898 74.946 0.0 0.0 0.0 4.201240402076294 1.0473535052001282 1.0473535052001282 1.0473535052001282 0 1.242992819099939 2.0 0.0 0.0 + + {I|L}{I|L}DDSH{I|L}{I|L}V;{I|L}{I|L}DDSH{I|L}V{I|L};{I|L}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{[QG]|[NA]}RY 4.7898;4.6874;3.8914 +;-;- + 358 + 1 1.499 65223.3 1.0 3215 5590 8803 SUDHL4_400M_050219_2,8807 SUDHL4_400M_050219_2,8807,ILDDSHLLV True True ILDDSHLLV 48.482672 512.787585437298 1013800.8125 8803.0 ENSG00000021776|ENST00000156471|AQR 4.492401758829753 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8808 48.493 597.0 163960.0 25 0 38399.0 19500 LFLLLMLSV 9 87 524.8272779999278 1047.6400030666557 2 524.8275634646416 MULTI CID FTMS 0 0 0 8803 169158.6875 0.2588628523912882 -3 0.1771774291992187 5 Unmodified _LFLLLMLSV_ ENSG00000177054|ENST00000446113|ZDHHC13;ENST00000525490.5_1_11:19138758-19188042:+|nuORF;nc|ENSG00000177054|Q8IUH4-2|ZDHHC13;nc|ENSG00000177054|Q8IUH4-3|ZDHHC13 3.944395688203298 0.7769873103969335 6 {I|L} 1 8 9.8329 0.0 0.0 0.93857 0.0 0.0 916.5451524580602 0.0 916.5451524580602 0.0 -0.081952080940848 -0.081952080940848 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.93857 + + 20 + 1 1.499 78871.2 1.0 3216 5590 8803 SUDHL4_400M_050219_2,8808 SUDHL4_400M_050219_2,8808,LFLLLMLSV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8809 48.498 246.0 169870.0 25 0 19119.0 + 33527 SILEDPPSI 9 76 485.7577085905546 0 485.7582275271416 PEAK CID FTMS 0 0 0 8803 150995.515625 0.7347725946621869 8 -0.5290031433105469 6 Unmodified _SILEDPPSI_ ENSG00000064102|ENST00000261191|INTS13;nc|ENSG00000064102|Q9NVM9-2|INTS13 39.957323273325 0.0619271662220897 6 PPS 3 6 21.387 0.0 0.0 2.206 0.0 0.0 557.2688039433123 128.07196985416252 685.3407737974748 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 1.1549471895720984 0.0 + PPS 2.206 + + 72 + 1 1.499 37162.9 1.0 3217 5590 8803 SUDHL4_400M_050219_2,8809 SUDHL4_400M_050219_2,8809,SILEDPPSI True True SILEDPPSI 48.497695 485.758227527142 2471156.25 8803.0 nc|ENSG00000064102|Q9NVM9-2|INTS13;;ENSG00000064102|ENST00000261191|INTS13 4.791122595469157 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8810 48.509 637.0 169330.0 25 0 12624.0 + 11248 GESDDSILRL 10 119 552.7802490729227 1103.5459452126454 2 552.7797119021416 MULTI CID FTMS 0 0 0 8803 107751.828125 0.0893889194048126 -3 0.1771774291992187 7 Unmodified _GESDDSILRL_ ENSG00000171858|ENST00000343986|RPS21;ENST00000370562.1_1_20:60963217-60963421:+|nuORF 44.94466952835103 0.1098215951422272 6 {[DA]|[EG]}SDDS{I|L}{I|L}R{I|L} 10 0 + 91.289 0.0 0.0 8.2723 8.2723 90.026 0.0 0.0 0.0 70.31982520814672 10.379880530862051 10.379880530862051 6.487803220352362 0 1.0941876774005248 2.0 0.8494850021680094 0.0 + + {[DA]|[EG]}SDDS{I|L}{I|L}R{I|L};{[DA]|[EG]}SDD{I|L}S{I|L}R{I|L};{[DA]|[EG]}SD{I|L}DS{I|L}R{I|L};WSDY[HK]R{I|L};W[WE]DS{I|L}R{I|L};WSD[{M(Oxidation (M))|F}V][RV][VP];{[DA]|[EG]}[W{M(Oxidation (M))|F}]D[RV][VP];WS[{M(Oxidation (M))|F}V]D[RV][VP];{NN|[MP]|[D{I|L}]|[EV]}[K{I|L}]D{I|L}{[DS]|[MA]|[CV]|TT}W;[{I|L}T][RV]D[WE]W 8.2723;7.6844;7.5468;3.9182;3.564;2.0018;1.1478;1.1067;0.22827;0.1787 +;-;-;-;-;-;-;-;-;- + 308 + 1 1.499 85439.3 1.0 3218 5590 8803 SUDHL4_400M_050219_2,8810 SUDHL4_400M_050219_2,8810,GESDDSILRL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8811 48.515 349.0 88044.0 25 0 12360.0 25795 NKLILYKFDR 10 74 437.2572199566585 1308.7498304701755 3 437.2569152712822 MULTI CID FTMS 0 0 0 8803 134658.515625 1.0 0 0.0 8 Unmodified _NKLILYKFDR_ ENSG00000081985|ENST00000674203|IL12RB2;nc|ENSG00000081985|Q99665-2|IL12RB2;nc|ENSG00000081985|Q99665-3|IL12RB2 1.4819007175156935 0.719781833666733 6 {I|L} 1 9 10.379 0.0 0.0 0.79302 0.0 0.0 1177.6553308137286 0.0 1177.6553308137286 0.0 10.37860356969059 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.79302 + + 4 + 1 1.499 35525.3 1.0 3219 5590 8803 SUDHL4_400M_050219_2,8811 SUDHL4_400M_050219_2,8811,NKLILYKFDR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8813 48.532 800.0 96051.0 25 0 9515.7 -1 0 82 1035.1612320069607 3102.4618666210827 3 1035.497119128704 MULTI CID FTMS 0 0 0 8812 136647.625 0.1980694237061622 4 -0.2640953063964844 1 6 VM{[QD]|[EN]|[WG]|[KD]|[RS]} 4 -1 21.198 0.0 0.0 0.68326 0.0 0.0 2611.22320918865 0.0 2611.22320918865 0.0 5.26802492411967 0.0 0.0 0 0.5 0.0 0.0 0.0 VM{[QD]|[EN]|[WG]|[KD]|[RS]} 0.68326 - 353 1 1.499 59342.3 0.75 3220 5591 8812 SUDHL4_400M_050219_2,8813 SUDHL4_400M_050219_2,8813, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8814 48.533 88.0 420840.0 25 0 45190.0 + 18270 KVIEINPYL 9 68 544.8208670247002 1087.6271811162003 2 544.8214599490166 MULTI CID FTMS 0 0 0 8812 438491.1875 1.0 0 0.0 2 Unmodified _KVIEINPYL_ ENSG00000100804|ENST00000361611|PSMB5;ENSG00000204264|ENST00000374882|PSMB8;nc|ENSG00000100804|P28074-2|PSMB5;nc|ENSG00000204264|P28062-2|PSMB8 34.40172386719151 0.1061884637610825 6 [{I|L}T][RV]{I|L}NPY{I|L} 9 4 + 45.881 0.0 0.0 4.2184 4.2184 82.45 0.0 0.0 0.0 3.0002192593102706 31.539639395033223 3.0002192593102706 9.208187539523747 0 1.1237125054200234 1.2218487496163564 0.3494850021680094 0.4247425010840047 [{I|L}T][RV]{I|L}NPY{I|L};[{I|L}T][RV]{I|L}GGPY{I|L};[{I|L}T][RV]{I|L}N{[SA]|[TG]}[KS] 4.2184;3.3718;3.0751 -;-;- 105 1 1.499 37551.0 1.0 3221 5591 8812 SUDHL4_400M_050219_2,8814 SUDHL4_400M_050219_2,8814,KVIEINPYL True True KVIEINPYL 48.533487 544.821459949017 2298129.25 8812.0 nc|ENSG00000100804|P28074-2|PSMB5;;ENSG00000100804|ENST00000361611|PSMB5;;ENSG00000204264|ENST00000374882|PSMB8;;nc|ENSG00000204264|P28062-2|PSMB8 5.210297425587972 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8815 48.539 309.0 264250.0 25 0 28700.0 + 33879 SLFNGSHYL 9 108 519.2556910423292 1036.4968291514583 2 519.2555419802666 MULTI CID FTMS 0 0 0 8812 122096.015625 1.0 0 0.0 3 Unmodified _SLFNGSHYL_ ENSG00000064933|ENST00000441310|PMS1;nc|ENSG00000064933|P54277-3|PMS1 39.957323273325 0.0756908302845263 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}N[SG]HY{I|L} 9 0 + 52.514 0.0 0.0 5.0665 5.0665 79.854 0.0 0.0 0.0 38.78434091104747 8.701746761134714 8.701746761134714 3.802112417116064 0 0.3807196863200844 2.0 0.3807196863200844 0.3807196863200844 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}N[SG]HY{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}N{[WS]|[C(Carbamidomethyl (C)){I|L}]}NG{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EEHY{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}GG{[WS]|[C(Carbamidomethyl (C)){I|L}]}NG{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}N{[WS]|[C(Carbamidomethyl (C)){I|L}]}GGG{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}GG[SG]HY{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}N[SG]{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}[KC][SG]NE{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}EE{[VA]|[{I|L}G]}{[QD]|[EN]|[WG]|[KD]|[RS]};{[TV]|[{I|L}S]}[WQ]{NN|[MP]|[D{I|L}]|[EV]}Y{I|L} 5.0665;4.6997;4.0742;3.8113;3.8113;3.8108;3.4544;3.2022;2.8242;2.5556 +;-;-;-;-;-;-;-;-;- + 273 + 1 1.499 65051.7 1.0 3222 5591 8812 SUDHL4_400M_050219_2,8815 SUDHL4_400M_050219_2,8815,SLFNGSHYL True True SLFNGSHYL 48.539141 519.255541980267 615862.375 8812.0 nc|ENSG00000064933|P54277-3|PMS1;;ENSG00000064933|ENST00000441310|PMS1 6.818755467732747 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8816 48.553 800.0 113600.0 25 0 7079.5 + 31221 RLQQELMTL 9 113 574.3101146263585 1146.605676319517 2 574.3101074099541 MULTI CID FTMS 0 0 0 8812 105642.4296875 1.0 0 0.0 4 Oxidation (M) _RLQQELM(Oxidation (M))TL_ chr20:45814470-45815390|47|12.11|0.65|4.22|+|ENST00000335046|UBE2C,UBE2C;chr20:45815540-45815854|47|12.17|0.56|4.44|+|ENST00000617055|UBE2C,UBE2C;ENSG00000175063|ENST00000356455|UBE2C;ENST00000604665.1_1_19:58379289-58379556:+|nuORF;nc|ENSG00000175063|O00762-3|UBE2C;nc|ENSG00000175063|O00762-4|UBE2C 57.72198328787511 0.0273433238377839 6 [R{I|L}]QQE{I|L}{M(Oxidation (M))|F}T{I|L} 9 0 + 61.425 0.0 0.0 5.3571 5.3571 81.498 0.0 0.0 0.0 4.137342758552691 26.33085333508717 4.137342758552691 4.522976709946306 0 1.1861818737241734 0.0 0.3494850021680094 0.3494850021680094 + + [R{I|L}]QQE{I|L}{M(Oxidation (M))|F}T{I|L};[{I|L}A]{[NV]|[RG]}QE{I|L}{M(Oxidation (M))|F}T{I|L};[R{I|L}]QQE{I|L}T{M(Oxidation (M))|F}{I|L};[R{I|L}][AG]QE{I|L}{M(Oxidation (M))|F}T{I|L};[R{I|L}]Q[AG]E{I|L}{M(Oxidation (M))|F}T{I|L};[{I|L}A]{[NV]|[RG]}QE{I|L}T{M(Oxidation (M))|F}{I|L};[{I|L}A]M[{I|L}P]E{I|L}{M(Oxidation (M))|F}T{I|L};[{I|L}A]{[NV]|[RG]}[AG]E{I|L}{M(Oxidation (M))|F}T{I|L};[R{I|L}][AG]QE{I|L}T{M(Oxidation (M))|F}{I|L};[R{I|L}]Q[AG]E{I|L}T{M(Oxidation (M))|F}{I|L} 5.3571;4.9626;4.941;4.554;4.554;4.5465;4.2417;4.1633;4.1379;4.1379 +;-;-;-;-;-;-;-;-;- + 801 1 1.499 72406.7 0.4900000095367431 3223 5591 8812 SUDHL4_400M_050219_2,8816 SUDHL4_400M_050219_2,8816,RLQQELMTL True False RLQQELMTL 48.552974 574.310107409954 623452.625 8812.0 ENSG00000175063|ENST00000356455|UBE2C;;nc|ENSG00000175063|O00762-4|UBE2C;;ENST00000604665.1_1_19:58379289-58379556:+|nuORF;;chr20:45815540-45815854|47|12.17|0.56|4.44|+|ENST00000617055|UBE2C,UBE2C;;nc|ENSG00000175063|O00762-3|UBE2C;;chr20:45814470-45815390|47|12.11|0.65|4.22|+|ENST00000335046|UBE2C,UBE2C 5.888383070627849 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8817 48.561 433.0 128390.0 25 0 18011.0 + -1 KMWEEAISL 9 80 561.7787912745745 1121.5430296159489 2 561.7780029177666 MULTI CID FTMS 0 0 0 8812 110171.6640625 0.9689897935673988 -1 0.049774169921875 5 Oxidation (M) _KM(Oxidation (M))WEEAISL_ ENST00000523351.5_1_5:169188379-169509859:+|nuORF;ENSG00000134516|ENST00000520908|DOCK2 16.149105407346934 0.3995459350917656 6 [WE]AE{M(Oxidation (M))|F}K{I|L}S{I|L} 9 -1 + 37.514 0.0 0.0 3.3449 3.3449 81.775 0.0 0.0 0.0 4.762036441594198 22.029478005380064 4.762036441594198 12.218487496163569 0 0.8182503180159344 0.0 0.0 0.0 [WE]AE{M(Oxidation (M))|F}K{I|L}S{I|L};[VP][CS]E{M(Oxidation (M))|F}K{I|L}S{I|L};[WE]A[W{M(Oxidation (M))|F}]A{I|L}S{I|L};[WE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}EA{I|L}S{I|L};[WE]AE{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L};[VP][CS][W{M(Oxidation (M))|F}]A{I|L}S{I|L};[W{M(Oxidation (M))|F}][WQ][KQ]S{I|L};[WE]A[W{M(Oxidation (M))|F}]RD{I|L};[WE]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}ERD{I|L};[VP][CS]E{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}S{I|L} 3.3449;2.2554;2.2098;2.012;1.516;1.1204;0.81117;0.76097;0.56317;0.42656 -;-;-;-;-;-;-;-;-;- 93 1 1.499 52239.7 1.0 3224 5591 8812 SUDHL4_400M_050219_2,8817 SUDHL4_400M_050219_2,8817,KMWEEAISL False False KMWEEAISL 48.560685 561.778002917767 2330895.5 8812.0 ENST00000523351.5_1_5:169188379-169509859:+|nuORF;;ENSG00000134516|ENST00000520908|DOCK2 4.990485032399495 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8818 48.575 800.0 136920.0 25 0 9258.1 + 16541 KAWAEVYVV 9 154 532.7924368984184 1063.5703208636369 2 532.7924682497978 MULTI CID FTMS 0 0 0 8812 90366.6484375 1.0 0 0.0 6 Unmodified _KAWAEVYVV_ ENSG00000008869|ENST00000233099|HEATR5B;ENST00000471051.1_1_2:37235679-37241082:-|nuORF;nc|ENSG00000008869|Q9P2D3-3|HEATR5B 24.99096001346401 0.2132109383330889 6 [{I|L}T]{[WN]|[YH]}AVYVV 9 4 + 46.941 0.0 0.0 4.4135 4.4135 55.39 0.0 0.0 0.0 2.244237387763093 16.478174818886373 2.244237387763093 0.0 0 0.7302046884880937 1.3010299956639813 0.3494850021680094 0.0 [{I|L}T]{[WN]|[YH]}AVYVV;[{I|L}T]{[WN]|[YH]}AYVVV;{[QN]|[E{I|L}]|[KN]}[SG]KAVYVV;{[QN]|[E{I|L}]|[KN]}[SG]KAYVVV;[KA]WEAVYVV;[KA]WEAYVVV;[YV]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PEVVV;[{I|L}T]T{M(Oxidation (M))|F}W[KA]VV;{NN|[MP]|[D{I|L}]|[EV]}P{M(Oxidation (M))|F}{I|L}VYVV;{NN|[MP]|[D{I|L}]|[EV]}P{M(Oxidation (M))|F}{I|L}YVVV 4.4135;4.4135;4.2025;4.2025;3.7663;3.7663;3.6266;3.4898;3.2214;3.2214 -;-;-;-;-;-;-;-;-;- 925 1 1.499 96546.1 0.449999988079071 3225 5591 8812 SUDHL4_400M_050219_2,8818 SUDHL4_400M_050219_2,8818,KAWAEVYVV False True KAWAEVYVV 48.574516 532.792468249798 590879.125 8812.0 ENSG00000008869|ENST00000233099|HEATR5B;;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;;ENST00000471051.1_1_2:37235679-37241082:-|nuORF 4.234870592753093 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8819 48.588 800.0 158480.0 25 0 22048.0 -1 0 71 871.8796169982268 3483.489362126507 4 872.3802978396416 MULTI CID FTMS 0 0 0 8812 72018.640625 0.7705233739319236 -1 0.049774169921875 7 6 {I|L}C[PS]Q 5 -1 18.882 0.0 0.0 0.54205 0.0 0.0 2630.091975507169 322.14023767642817 2952.2322131835977 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6421590589602533 1.174742501084005 {I|L}C[PS]Q 0.54205 - 88 + 1 1.499 95625.6 0.3700000047683716 3226 5591 8812 SUDHL4_400M_050219_2,8819 SUDHL4_400M_050219_2,8819, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8821 48.594 66.0 928950.0 25 0 79935.0 + 31277 RLWPKIQGL 9 79 555.8427019646269 1109.6708509960538 2 555.8428222537041 MULTI CID FTMS 0 0 0 8820 860039.5 0.9202640528266156 1 -0.0511207580566406 1 Unmodified _RLWPKIQGL_ ENSG00000168209|ENST00000307365|DDIT4 43.85829265575387 0.0542763391141878 6 [Q{I|L}][{I|L}T]PK{I|L}Q 8 5 28.294 0.0 0.0 2.5497 0.0 0.0 0.0 185.09709546310376 185.09709546310376 12.580240701170167 0.0 0.0 0.0 0 1.1549471895720984 0.0 0.7614393726401688 0.0 [Q{I|L}][{I|L}T]PK{I|L}Q 2.5497 - 172 1 1.499 54808.8 1.0 3227 5592 8820 SUDHL4_400M_050219_2,8821 SUDHL4_400M_050219_2,8821,RLWPKIQGL True True RLWPKIQGL 48.593826 555.842822253704 27912447.0 8820.0 ENSG00000168209|ENST00000307365|DDIT4 6.534221808115642 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8822 48.601 393.0 181600.0 25 0 15252.0 -1 0 73 974.9632824560656 0 974.9628784060478 PEAK CID FTMS 0 0 0 8820 168877.0625 0.3898318888545438 3 -0.1908416748046875 2 6 {I|L}NADQ 5 -1 41.37 0.0 0.0 2.1238 0.0 0.0 472.187904529068 931.4590548151 1403.646959344168 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.7614393726401688 {I|L}NADQ 2.1238 - 595 + 1 1.499 55201.0 1.0 3228 5592 8820 SUDHL4_400M_050219_2,8822 SUDHL4_400M_050219_2,8822, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8823 48.611 559.0 150710.0 25 0 18218.0 + 11794 GLLQQPPAL 9 109 468.7792414847664 935.5439300363328 2 468.7794372439384 MULTI CID FTMS 0 0 0 8820 148995.6875 1.0 0 0.0 3 Unmodified _GLLQQPPAL_ ENSG00000112242|ENST00000346618|E2F3 49.66892048692302 0.0410958345688192 6 {[VA]|[{I|L}G]}AQVA 6 5 37.198 0.0 0.0 3.9761 0.0 0.0 0.0 393.21489382002375 393.21489382002375 11.28022170376731 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.6747425010840047 {[VA]|[{I|L}G]}AQVA 3.9761 - 478 1 1.499 65447.5 1.0 3229 5592 8820 SUDHL4_400M_050219_2,8823 SUDHL4_400M_050219_2,8823,GLLQQPPAL True True GLLQQPPAL 48.610701 468.779437243938 1299116.0 8820.0 ENSG00000112242|ENST00000346618|E2F3 7.3193583488464355 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8824 48.622 627.0 123300.0 25 0 8485.8 23667 LTRWDLVL 8 123 508.3018625351411 1014.5891721370822 2 508.3020812869072 MULTI CID FTMS 0 0 0 8820 143408.0 0.0239160975375465 24 -1.2121505737304688 4 Unmodified _LTRWDLVL_ ENST00000505289.5_1_4:134017916-134060133:-|nuORF 23.1484247019978 0.5573009939494978 6 [{M(Oxidation (M))|F}V]A 3 7 23.996 0.0 0.0 2.3651 0.0 0.0 0.0 694.428354939285 694.428354939285 -2.931052042036772 0.0 -2.931052042036772 0.0 0 0.5 0.8538719643217619 0.0 0.0 [{M(Oxidation (M))|F}V]A 2.3651 - 267 + 1 1.499 61022.4 1.0 3230 5592 8820 SUDHL4_400M_050219_2,8824 SUDHL4_400M_050219_2,8824,LTRWDLVL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8825 48.63 447.0 176840.0 25 0 39588.0 + 8870 FADFERHFL 9 98 394.5290027942252 1180.5651789828755 3 394.5291625857353 MULTI CID FTMS 0 0 0 8820 85662.0703125 0.6225130126129236 -2 0.1230278015136718 5 Unmodified _FADFERHFL_ ENSG00000079616|ENST00000160827|KIF22;ENST00000563666.1_1_16:29810259-29810893:+|nuORF;nc|ENSG00000079616|Q14807-2|KIF22 18.373094154950223 0.3393451798331396 6 SH[KC]A{I|L}E 7 9 29.965 0.0 0.0 2.5382 0.0 0.0 394.1909352033219 0.0 394.1909352033219 0.0 18.99629454882437 0.0 0.0 0 0.0 0.0 0.0 0.0 SH[KC]A{I|L}E 2.5382 - 244 1 1.499 68355.7 1.0 3231 5592 8820 SUDHL4_400M_050219_2,8825 SUDHL4_400M_050219_2,8825,FADFERHFL False True FADFERHFL 48.629561 394.529162585735 900217.0 8820.0 ENSG00000079616|ENST00000160827|KIF22;;ENST00000563666.1_1_16:29810259-29810893:+|nuORF;;nc|ENSG00000079616|Q14807-2|KIF22 0.8507757484912872 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8826 48.639 566.0 177070.0 25 0 15686.0 + 9379 FIQEIEHAL 9 129 550.2927600478727 1098.5709671625452 2 550.2935668826103 MULTI CID FTMS 0 0 0 8820 85456.34375 0.7728007553351836 -1 0.0732536315917968 6 Unmodified _FIQEIEHAL_ ENSG00000131558|ENST00000253861|EXOC4 67.34385681178166 0.0221257235307089 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QE{I|L}EHA{I|L} 9 0 + 47.616 0.0 0.0 4.3344 4.3344 84.257 0.0 0.0 0.0 12.498322436302438 6.743388362496248 6.743388362496248 10.791069339139677 0 0.6109243748081782 0.0 1.2302046884880935 0.4247425010840047 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QE{I|L}EHA{I|L};{[YC]|[HE]}{I|L}EQA{I|L}{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[AG]E{I|L}EHA{I|L};{[{M(Oxidation (M))|F}D]|MM}TVSSA{I|L}{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EVSSA{I|L}{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QE{I|L}[R{M(Oxidation (M))|F}]{M(Oxidation (M))|F};{[YC]|[HE]}A{I|L}EGA{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{I|L}AEGA{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{I|L}EAGA{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}[EP]{I|L}EQ{[QN]|[E{I|L}]|[KN]} 4.3344;3.3521;3.1096;3.0665;2.9063;2.6275;2.627;2.486;2.4042;2.3895 +;-;-;-;-;-;-;-;-;- + 1303 + 1 1.499 80024.5 1.0 3232 5592 8820 SUDHL4_400M_050219_2,8826 SUDHL4_400M_050219_2,8826,FIQEIEHAL True True FIQEIEHAL 48.639484 550.29356688261 576409.625 8820.0 ENSG00000131558|ENST00000253861|EXOC4 5.563558578491211 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8828 48.657 800.0 83407.0 25 0 22389.0 13397 HLKRLGVLLDY 11 84 663.8953336984475 1325.776114463695 2 663.8956786990166 MULTI CID FTMS 0 0 0 8827 240613.84375 0.9071818080170548 2 -0.1397209167480468 1 Unmodified _HLKRLGVLLDY_ ENSG00000080561|ENST00000262843|MID2;nc|ENSG00000080561|Q9UJV3-2|MID2 1.3295316138638542 0.8688751186870782 6 H 1 10 1.9897 0.0 0.0 0.15008 0.0 0.0 1012.6123093873264 173.08213220767814 1185.6944415950045 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + H 0.15008 + + 1 + 1 1.499 64909.0 0.8299999833106995 3233 5593 8827 SUDHL4_400M_050219_2,8828 SUDHL4_400M_050219_2,8828,HLKRLGVLLDY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8829 48.661 207.0 291480.0 25 0 36998.0 + 37837 TLTRPPLSI 9 67 499.3055041395215 996.596455345843 2 499.3058654665947 MULTI CID FTMS 0 0 0 8827 228201.703125 0.2970615315998147 -2 0.1243743896484375 2 Unmodified _TLTRPPLSI_ REV__ENST00000164227.9_1_19:45262993-45263197:+|nuORF 25.399314129420983 0.2080152500878129 6 {NN|[MP]|[D{I|L}]|[EV]}RPA{I|L}{I|L}TV 9 -1 + 66.335 0.0 0.0 6.6561 6.6561 94.303 0.0 0.0 0.0 17.376430167995878 35.74507644725507 17.376430167995878 29.420080530223125 0 0.8252574989159953 1.5228787452803376 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}RPA{I|L}{I|L}TV;[VP]{[RE]|[WV]}A{I|L}{I|L}TV 6.6561;3.7041 -;- 170 1 1.499 51347.4 1.0 3234 5593 8827 SUDHL4_400M_050219_2,8829 SUDHL4_400M_050219_2,8829,TLTRPPLSI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8830 48.667 314.0 255350.0 25 0 27964.0 + + 40017 KLIDGQVIQL 10 103 563.8447241593713 1125.6748953855424 2 563.8448364138603 MULTI CID FTMS 0 0 0 8827 181892.609375 0.6307819877375715 -1 0.0511207580566406 3 Unmodified _VGEQVKILQL_ nc|ENSG00000166478|P52747-3|ZNF143;nc|ENSG00000166478|P52747-2|ZNF143;ENSG00000166478|ENST00000396602|ZNF143 45.739877483867886 0.1051543674217965 6 [Q{I|L}][DG]V{I|L}K{I|L}Q{I|L} 10 -1 + 56.124 0.0 0.0 4.9858 4.9858 78.481 0.0 0.0 0.0 3.0102999566398125 16.53212513775344 3.0102999566398125 3.0102999566398125 0 0.3807196863200844 0.0 0.3494850021680094 0.9436726795685342 [Q{I|L}][DG]V{I|L}K{I|L}Q{I|L};[Q{I|L}][DG]VK{I|L}{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[NG]V{I|L}K{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[NG]VK{I|L}{I|L}Q{I|L};[K{I|L}]{I|L}D{[QG]|[NA]}V{I|L}Q{I|L};[Q{I|L}][DG][K{I|L}]V{I|L}Q{I|L};[Q{I|L}][DG]V{I|L}K{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[NG][K{I|L}]V{I|L}Q{I|L};[Q{I|L}][DG]VK{I|L}{I|L}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}[NG]V{I|L}K{I|L}[AG]{I|L} 4.9858;4.7184;4.7184;4.451;4.4001;4.2041;4.1717;3.9367;3.9043;3.9043 -;-;-;-;-;-;-;-;-;- 368 1 1.499 66173.4 1.0 3235 5593 8827 SUDHL4_400M_050219_2,8830 SUDHL4_400M_050219_2,8830,VGEQVKILQL False False KLIDGQVIQL 48.666859 563.84483641386 1309501.0 8827.0 nc|ENSG00000166478|P52747-3|ZNF143;;nc|ENSG00000166478|P52747-2|ZNF143;;ENSG00000166478|ENST00000396602|ZNF143 5.355376084645589 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8831 48.681 800.0 110460.0 25 0 14593.0 + 43870 YFPCHCLSEL 10 109 606.2673414486407 1210.5201299640812 2 606.2679931521416 MULTI CID FTMS 0 0 0 8827 133959.484375 0.526520337440955 -1 0.0511207580566406 4 Unmodified _YFPCHCLSEL_ REV__ENSG00000180488|ENST00000370791|MIGA1;REV__ENST00000476203.2_1_1:78269082-78324778:+|nuORF;REV__nc|ENSG00000180488|Q8NAN2-2|MIGA1;REV__nc|ENSG00000180488|Q8NAN2|MIGA1 20.453626601364224 0.5043500229302764 6 TAK{M(Oxidation (M))|F}E{I|L} 6 -1 24.913 0.0 0.0 2.0581 0.0 0.0 503.14961440254064 0.0 503.14961440254064 0.0 10.30902815397355 0.0 0.0 0 0.5796896906561032 0.0 0.3252574989159953 0.0 TAK{M(Oxidation (M))|F}E{I|L} 2.0581 - 251 1 1.499 70661.1 0.550000011920929 3236 5593 8827 SUDHL4_400M_050219_2,8831 SUDHL4_400M_050219_2,8831,YFPCHCLSEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8832 48.682 74.0 735550.0 25 0 246840.0 + + 9970 GPFPGASAPFL 11 60 529.7950600304307 1057.575567127661 2 530.2971069216728 MULTI CID FTMS 0 0 0 8827 443740.90625 0.6578077449832793 -2 0.1243743896484375 5 Unmodified _FPGPRQFLP_ ENSG00000090470|ENST00000204549|PDCD7 20.871210003555333 0.2717241269066626 6 [PG]{M(Oxidation (M))|F}P[QT]{I|L}{I|L}W 9 -1 + 52.157 0.0 0.0 4.9317 4.9317 79.945 0.0 0.0 0.0 4.643783536941726 8.578657607039247 4.643783536941726 4.643783536941726 0 0.3494850021680094 1.154901959985743 0.0 0.0 [PG]{M(Oxidation (M))|F}P[QT]{I|L}{I|L}W;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP[QT]{I|L}{I|L}W;[PG]{M(Oxidation (M))|F}P[WR]{I|L}SV;[PG]W{[WT]|[RM]}{I|L}{I|L}SV;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}[HD]{M(Oxidation (M))|F}P{I|L};[PG]{M(Oxidation (M))|F}P{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VVW;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP[WR]{I|L}SV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GP{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VVW;{[CT]|[{M(Oxidation (M))|F}G]}{I|L}{I|L}[QT]P[WP];{[CT]|[{M(Oxidation (M))|F}G]}{I|L}[NP][PG]{M(Oxidation (M))|F}P{I|L} 4.9317;4.4926;3.5029;3.3848;3.1788;3.1588;3.0638;2.7197;2.3514;2.0235 -;-;-;-;-;-;-;-;-;- 129 1 1.499 49209.8 1.0 3237 5593 8827 SUDHL4_400M_050219_2,8832 SUDHL4_400M_050219_2,8832,FPGPRQFLP False False GPFPGASAPFL 48.68243 530.297106921673 342278.6875 8827.0 ENSG00000090470|ENST00000204549|PDCD7 2.1429253220558167 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8833 48.688 303.0 355790.0 25 0 45684.0 + 28591 PTVSTLLAP 9 88 898.5231566447676 897.5158801781675 1 900.5304443240166 MULTI CID FTMS 0 0 0 8827 329211.3125 0.0038177331239728 41 -1.985748291015625 6 Unmodified _PTVSTLLAP_ REV__ENSG00000080603|ENST00000262518|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-2|SRCAP;REV__nc|ENSG00000080603|Q6ZRS2-3|SRCAP 34.10243960390752 0.1078313939113124 6 [TP]A[KS]QVA 8 -1 40.535 0.0 0.0 4.5164 0.0 0.0 0.0 112.04783753584256 112.04783753584256 16.970035987033466 0.0 0.0 0.0 0 0.0 0.7695510786217261 1.6976212463643423 0.0 [TP]A[KS]QVA 4.5164 - 2469 1 1.499 74564.2 1.0 3238 5593 8827 SUDHL4_400M_050219_2,8833 SUDHL4_400M_050219_2,8833,PTVSTLLAP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8834 48.702 800.0 122090.0 25 0 9006.5 -1 0 82 673.4122776585358 672.4050011919358 1 673.4128295779228 MULTI CID FTMS 0 0 0 8827 199414.59375 0.6694146732368176 2 -0.1397209167480468 7 6 {[TV]|[{I|L}S]}{I|L}VE{I|L} 6 -1 + 67.133 0.0 0.0 9.984 9.984 86.925 0.0 0.0 0.0 4.476212463643421 13.010299956639813 4.476212463643421 1.989700043360188 0 1.079689690656103 1.5228787452803376 1.774227503252014 0.0 {[TV]|[{I|L}S]}{I|L}VE{I|L};{[TV]|[{I|L}S]}{I|L}EV{I|L};[{I|L}V]TVE{I|L};[{I|L}V]TEV{I|L};{[TV]|[{I|L}S]}{I|L}D{I|L}{I|L};{[TV]|[{I|L}S]}E{I|L}V{I|L};{[QN]|[E{I|L}]|[KN]}S{I|L}V{I|L};[{I|L}V]TD{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}T{I|L}V{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}SV{I|L} 9.984;9.6881;9.3183;9.0224;8.3127;8.1628;7.8106;7.647;7.4251;7.3602 -;-;-;-;-;-;-;-;-;- 382 1 1.499 75901.5 0.6899999976158142 3239 5593 8827 SUDHL4_400M_050219_2,8834 SUDHL4_400M_050219_2,8834, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8835 48.717 800.0 41668.0 25 0 5417.6 26582 NVLVVSKYFLN 11 68 648.3740745464576 1294.733596159715 2 648.3744384646416 MULTI CID FTMS 0 0 0 8827 92179.9140625 0.5335465132579132 3 -0.2193412780761718 8 Unmodified _NVLVVSKYFLN_ ENST00000428210.5_1_2:61719906-61720176:-|nuORF 2.735195868890462 0.8622431031272658 6 M 1 11 0.9691 0.0 0.0 0.074849 0.0 0.0 552.3361485052213 608.3451021783811 1160.6812506836025 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.074849 - 2 + 1 1.499 33690.0 0.4600000083446502 3240 5593 8827 SUDHL4_400M_050219_2,8835 SUDHL4_400M_050219_2,8835,NVLVVSKYFLN False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8837 48.726 304.0 170320.0 25 0 13047.0 23883 LVLKYREDII 10 77 421.2557692850727 1260.7454784554182 3 421.5898620486259 MULTI CID FTMS 0 0 0 8836 135140.96875 0.3321823035196025 3 -0.1863479614257812 1 Unmodified _LVLKYREDII_ ENSG00000029725|ENST00000537505|RABEP1;ENST00000575475.2_1_17:5185712-5281605:+|nuORF;nc|ENSG00000029725|Q15276-2|RABEP1 9.38312468134398 0.6832340498775793 6 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR 10 8 + 85.438 0.0 0.0 6.7768 6.7768 89.406 0.0 0.0 0.0 72.96388461952553 17.769250191953674 17.769250191953674 9.164539485499247 0 0.3054621874040891 2.0 0.0 0.4247425010840047 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HHR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HHR;[{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}RHH;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}RHH 6.7768;6.0499;5.249;4.522 -;-;-;- 120 + 1 1.499 51594.8 1.0 3241 5594 8836 SUDHL4_400M_050219_2,8837 SUDHL4_400M_050219_2,8837,LVLKYREDII False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8838 48.728 80.0 193290.0 25 0 12923.0 + -1 MIELKQALQ 9 46 545.301697195708 1088.588841458216 2 545.3022338747978 MULTI CID FTMS 0 0 0 8836 379186.25 1.0 0 0.0 2 Oxidation (M) _M(Oxidation (M))IELKQALQ_ REV__ENSG00000185359|ENST00000329138|HGS;REV__nc|ENSG00000185359|O14964-2|HGS 3.944395688203298 0.7769873103969335 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 4 1 1.499 20837.4 1.0 3242 5594 8836 SUDHL4_400M_050219_2,8838 SUDHL4_400M_050219_2,8838,MIELKQALQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8839 48.731 153.0 203220.0 25 0 14313.0 + 31299 RLYPEGLAQL 10 59 580.3270061239972 1158.6394593147943 2 580.3275634646416 MULTI CID FTMS 0 0 0 8836 338939.9375 0.2456743860630824 -3 0.20172119140625 3 Unmodified _RLYPEGLAQL_ ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF 19.143941131932102 0.5263252730532664 6 G{I|L}AQ{I|L} 5 5 44.266 0.0 0.0 3.8205 0.0 0.0 658.3466053693375 0.0 658.3466053693375 0.0 33.29689690656103 0.0 0.0 0 0.6307196863200843 0.0 0.0 0.0 + G{I|L}AQ{I|L} 3.8205 + + 44 1 1.499 30582.5 1.0 3243 5594 8836 SUDHL4_400M_050219_2,8839 SUDHL4_400M_050219_2,8839,RLYPEGLAQL False True RLYPEGLAQL 48.731125 580.327563464642 28395549.0 8836.0 ENST00000563305.1_1_16:67472744-67473248:-|nuORF;;ENSG00000159720|ENST00000290949|ATP6V0D1 7.8218199412028 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8840 48.735 218.0 228550.0 25 0 27329.0 + 26021 NLYPFVKTV 9 76 540.8080481455914 0 540.8082153201103 PEAK CID FTMS 0 0 0 8836 326685.3125 0.4778226025773706 -3 0.20172119140625 4 Unmodified _NLYPFVKTV_ ENSG00000138363|ENST00000236959|ATIC;ENST00000427397.5_1_2:216176945-216197107:+|nuORF;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC 38.17557092003332 0.0706864996250298 6 Y 1 8 16.237 0.0 0.0 1.504 0.0 0.0 227.12506661673092 686.3867642534007 913.5118308701316 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + Y 1.504 + + 88 + 1 1.499 42086.8 1.0 3244 5594 8836 SUDHL4_400M_050219_2,8840 SUDHL4_400M_050219_2,8840,NLYPFVKTV True True NLYPFVKTV 48.73526 540.80821532011 12133057.0 8836.0 ENSG00000138363|ENST00000236959|ATIC;;ENST00000427397.5_1_2:216176945-216197107:+|nuORF;;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;;nc|ENSG00000138363|P31939-2|ATIC 6.452466328938802 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8841 48.749 800.0 100310.0 25 0 26116.0 43391 WQRKISIWPAL 11 94 699.4086259992356 1396.802699065271 2 699.4088622927666 MULTI CID FTMS 0 0 0 8836 191044.34375 1.0 0 0.0 5 Unmodified _WQRKISIWPAL_ ENSG00000257315|ENST00000550078|ZBED6 1.4819007175156935 0.86815623132643 6 H 1 11 9.464 0.0 0.0 0.67754 0.0 0.0 1241.7358635933945 0.0 1241.7358635933945 0.0 0.5381693919991459 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.67754 - 24 + 1 1.499 71387.8 0.6600000262260437 3245 5594 8836 SUDHL4_400M_050219_2,8841 SUDHL4_400M_050219_2,8841,WQRKISIWPAL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8842 48.754 278.0 193260.0 25 0 22155.0 29061 QEITVQQL 8 88 479.76380216888623 0 479.7639953494072 PEAK CID FTMS 0 0 0 8836 181142.15625 0.785341384533031 -1 0.0773468017578125 6 Unmodified _QEITVQQL_ ENSG00000137500|ENST00000529689|CCDC90B;ENST00000526631.1_1_11:82985654-82997015:-|nuORF;nc|ENSG00000137500|Q9GZT6-2|CCDC90B;nc|ENSG00000137500|Q9GZT6-3|CCDC90B 57.47134341890925 0.0598894551838661 6 T{I|L}DA 4 7 18.66 0.0 0.0 1.9488 0.0 0.0 387.2091096094537 167.08283411197502 554.2919437214288 0.0 0.0 0.0 0.0 0 0.2742275032520141 0.0 0.0 0.0 T{I|L}DA 1.9488 - 255 + 1 1.499 47267.0 1.0 3246 5594 8836 SUDHL4_400M_050219_2,8842 SUDHL4_400M_050219_2,8842,QEITVQQL True True GLADITQQL 48.754204 479.763995349407 1239062.375 8836.0 nc|ENSG00000167258|Q9NYV4-3|CDK12;;nc|ENSG00000167258|Q9NYV4-2|CDK12;;ENSG00000167258|ENST00000447079|CDK12 4.812346458435059 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8843 48.765 640.0 130130.0 25 0 16318.0 + + 19120 ALLDPNWHC 9 126 533.7761585534398 1065.5377641736795 2 534.2790405154228 MULTI CID FTMS 0 0 0 8836 117539.2890625 1.0 0 0.0 7 Unmodified _LDVLYCEVL_ nc|ENSG00000144354|Q9BWT1-5|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7;ENSG00000144354|ENST00000306721|CDCA7 12.531546534597751 0.4974689918368763 6 [{I|L}A][WH]EEAV 8 -1 32.396 0.0 0.0 3.0403 0.0 0.0 0.0 127.06831772276075 127.06831772276075 11.461280356782382 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A][WH]EEAV 3.0403 - 467 1 1.499 68968.4 1.0 3247 5594 8836 SUDHL4_400M_050219_2,8843 SUDHL4_400M_050219_2,8843,LDVLYCEVL False False ALLDPNWHC 48.765371 534.279040515423 359156.1875 8836.0 nc|ENSG00000144354|Q9BWT1-5|CDCA7;;nc|ENSG00000144354|Q9BWT1-6|CDCA7;;nc|ENSG00000144354|Q9BWT1|CDCA7;;ENSG00000144354|ENST00000306721|CDCA7 6.53373924891154 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8844 48.779 800.0 157840.0 25 0 19163.0 + 22803 LQVRLQYRGS 10 89 610.3479801404864 1218.6814073477726 2 610.3484985232353 MULTI CID FTMS 0 0 0 8836 91159.53125 0.5296442106451931 -5 0.328460693359375 8 Unmodified _LQVRLQYRGS_ REV__ENSG00000221986|ENST00000357155|MYBPHL 3.5964929083625545 0.7100006075494749 6 S 1 -1 3.8735 0.0 0.0 0.31784 0.0 0.0 609.3869870370289 519.2446841545534 1128.6316711915824 0.0 0.0 0.0 0.0 0 0.0 0.0 0.2614393726401688 0.0 S 0.31784 + + 3 + 1 1.499 100998.0 0.4699999988079071 3248 5594 8836 SUDHL4_400M_050219_2,8844 SUDHL4_400M_050219_2,8844,LQVRLQYRGS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8846 48.784 91.0 534610.0 25 0 109250.0 17492 KPGPLRRAH 9 68 516.3139620750118 1030.6133712168237 2 516.3142578005791 MULTI CID FTMS 0 0 0 8845 562806.0625 0.4335855814316741 3 -0.2151336669921875 1 Unmodified _KPGPLRRAH_ ENST00000354765.6_1_6:144285946-144286364:-|nuORF 0.5247636613948944 0.8963649302248013 6 {I|L} 1 8 9.1487 0.0 0.0 0.88769 0.0 0.0 899.5183527615485 0.0 899.5183527615485 0.0 8.039447674943432 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.88769 + + 3 + 1 1.499 41187.0 1.0 3249 5595 8845 SUDHL4_400M_050219_2,8846 SUDHL4_400M_050219_2,8846,KPGPLRRAH False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8847 48.786 75.0 547500.0 25 0 45413.0 + 11249 GESDDSILRL 10 55 552.7802490729227 1103.5459452126454 2 552.7803832888603 MULTI CID FTMS 0 0 0 8845 597924.8125 0.4960273417607058 2 -0.1239738464355468 2 Unmodified _GESDDSILRL_ ENSG00000171858|ENST00000343986|RPS21;ENST00000370562.1_1_20:60963217-60963421:+|nuORF 18.3397198061782 0.5398193257859029 6 {[DA]|[EG]}SDDS{I|L}{I|L}[R{I|L}] 10 0 + 76.471 0.0 0.0 6.9296 6.9296 95.603 0.0 0.0 0.0 53.79493455131808 7.269987279362624 7.269987279362624 48.325097333828566 0 0.805462187404089 2.0 0.0 0.0 + + {[DA]|[EG]}SDDS{I|L}{I|L}[R{I|L}];{[DA]|[EG]}{I|L}[HD][HQ][R{I|L}] 6.9296;2.5505 +;- + 56 + 1 1.499 39971.1 1.0 3250 5595 8845 SUDHL4_400M_050219_2,8847 SUDHL4_400M_050219_2,8847,GESDDSILRL False True GESDDSILRL 48.785737 552.78038328886 13707486.0 8845.0 ENSG00000171858|ENST00000343986|RPS21;;ENST00000370562.1_1_20:60963217-60963421:+|nuORF 6.67969290415446 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8848 48.788 104.0 541510.0 25 0 145530.0 + 1598 ALLKIEGVYA 10 67 538.8213450085823 1075.6281370839645 2 538.8213989138603 MULTI CID FTMS 0 0 0 8845 480138.4375 0.2345090387547546 -2 0.1397209167480468 3 Unmodified _ALLKIEGVYA_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000329092.12_1_3:197677808-197679492:+|nuORF;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 19.62595529434964 0.5182375435722777 6 [{I|L}A][DV]K{I|L}A{I|L}YA 10 5 + 59.415 0.0 0.0 5.5238 5.5238 80.565 0.0 0.0 0.0 17.523299355931528 33.499934467764874 17.523299355931528 3.0102999566398125 0 1.1989700043360187 1.5228787452803376 0.7302046884880937 0.0 [{I|L}A][DV]K{I|L}A{I|L}YA;[{I|L}A]{I|L}[QT]{I|L}A{I|L}YA;[{I|L}A][VS][VG]{I|L}A{I|L}YA;[{I|L}A][DV]KVVVYA;[{I|L}A]{I|L}[QT]VVVYA;[K{I|L}]E[VG]{I|L}A{I|L}YA;[{I|L}A][DV]A[K{I|L}]{I|L}YA;[{I|L}A]{I|L}[DG][K{I|L}]{I|L}YA;[K{I|L}]E[VG]VVVYA 5.5238;5.2439;4.3919;4.3403;4.0604;3.527;3.2919;3.012;2.3435 -;-;-;-;-;-;-;-;- 205 1 1.499 48939.9 1.0 3251 5595 8845 SUDHL4_400M_050219_2,8848 SUDHL4_400M_050219_2,8848,ALLKIEGVYA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8849 48.791 181.0 293730.0 25 0 54297.0 + 9352 FILVLALSWTF 11 70 655.3820952773966 1308.7496376215931 2 655.3824951052666 MULTI CID FTMS 0 0 0 8845 333231.15625 0.4014808115280605 4 -0.2590179443359375 4 Unmodified _FILVLALSWTF_ REV__ENST00000483133.1_7:100610687-100610783:+|nuORF 6.2057823575117 0.8458686499021061 6 T{I|L}W 3 -1 11.508 0.0 0.0 0.8793 0.0 0.0 890.5290393323338 0.0 890.5290393323338 0.0 3.831729693732573 0.0 0.0 0 0.0 0.0 0.0 0.0 T{I|L}W 0.8793 - 161 + 1 1.499 56098.2 1.0 3252 5595 8845 SUDHL4_400M_050219_2,8849 SUDHL4_400M_050219_2,8849,FILVLALSWTF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8850 48.797 277.0 222590.0 25 0 42156.0 23086 LSLVRVKSF 9 89 524.8272779999278 1047.6400030666557 2 524.8275024294853 MULTI CID FTMS 0 0 0 8845 209526.109375 0.320636954121919 2 -0.1239738464355468 5 Unmodified _LSLVRVKSF_ ENST00000394169.5_1_17:38082205-38082379:-|nuORF 2.059750862983233 0.8427793054688888 6 {M(Oxidation (M))|F} 1 8 11.42 0.0 0.0 1.0901 0.0 0.0 882.5605027998571 0.0 882.5605027998571 0.0 0.5825278453571858 0.0 0.0 0 0.0 0.0 0.0 0.0 + {M(Oxidation (M))|F} 1.0901 + + 26 + 1 1.499 52984.8 1.0 3253 5595 8845 SUDHL4_400M_050219_2,8850 SUDHL4_400M_050219_2,8850,LSLVRVKSF False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8851 48.809 710.0 101250.0 25 0 9308.0 + 33528 SILEDPPSI 9 94 485.7577085905546 0 485.7578613162041 PEAK CID FTMS 0 0 0 8845 112666.3515625 0.5482556692232909 13 -0.6109619140625 6 Unmodified _SILEDPPSI_ ENSG00000064102|ENST00000261191|INTS13;nc|ENSG00000064102|Q9NVM9-2|INTS13 61.357469665136826 0.0154611170783358 6 DPPS 4 5 25.561 0.0 0.0 2.6365 0.0 0.0 442.2417832926344 128.07203088931877 570.3138141819531 0.0 0.0 0.0 0.0 0 0.7614393726401688 0.0 1.1382104921644451 0.0 + DPPS 2.6365 + + 167 + 1 1.499 57787.6 1.0 3254 5595 8845 SUDHL4_400M_050219_2,8851 SUDHL4_400M_050219_2,8851,SILEDPPSI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8852 48.821 677.0 154590.0 25 0 25740.0 + 12651 GVLDTLTKV 9 101 473.28439030878815 944.5542276843764 2 473.2839233279228 MULTI CID FTMS 0 0 0 8845 115171.296875 0.6206094565324924 -1 0.0623741149902343 7 Unmodified _GVLDTLTKV_ ENSG00000214114|ENST00000397572|MYCBP;ENST00000495043.5_1_1:39330344-39338774:-|nuORF 60.07390631473393 0.0260411565414776 6 [VG]{I|L}DT{I|L}TKV 9 0 + 78.444 0.0 0.0 8.3049 8.3049 96.543 0.0 0.0 0.0 39.48638135581298 11.706962271689749 11.706962271689749 19.41925971282174 0 1.0044321917401078 2.0 0.8494850021680094 0.2614393726401688 + + [VG]{I|L}DT{I|L}TKV;[VG]{I|L}DT{I|L}[KS]{I|L};[VG]VV[R{M(Oxidation (M))|F}]{I|L}R;[{I|L}T]TRW{I|L}R 8.3049;6.2489;2.6301;2.1906 +;-;-;- + 288 + 1 1.499 89313.7 1.0 3255 5595 8845 SUDHL4_400M_050219_2,8852 SUDHL4_400M_050219_2,8852,GVLDTLTKV True True GVLDTLTKV 48.820671 473.283923327923 1008173.0 8845.0 ENSG00000214114|ENST00000397572|MYCBP;;ENST00000495043.5_1_1:39330344-39338774:-|nuORF 6.266365845998128 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8853 48.835 800.0 99803.0 25 0 9726.5 + -1 IDYEEMSMV 9 84 574.7281852700075 1147.441817606815 2 574.7286254763603 MULTI CID FTMS 0 0 0 8845 106087.21875 1.0 0 0.0 8 2 Oxidation (M) _IDYEEM(Oxidation (M))SM(Oxidation (M))V_ REV__ENSG00000089250|ENST00000317775|NOS1;REV__nc|ENSG00000089250|P29475-2|NOS1;REV__nc|ENSG00000089250|P29475-3|NOS1;REV__nc|ENSG00000089250|P29475-5|NOS1 4.3292370932331545 0.7635526921153418 6 EEWNPD{I|L}[MD] 9 -1 + 40.353 0.0 0.0 3.5168 3.5168 82.631 0.0 0.0 0.0 10.400217704352457 8.670912423450403 8.670912423450403 13.455612550363796 0 0.0 0.0 0.3252574989159953 0.4247425010840047 EEWNPD{I|L}[MD];EEWGGPD{I|L}[MD];[DP][MT]NPD{I|L}[MD];[NP]WEED{I|L}[MD];[NP]D[MT]PD{I|L}[MD];[DP]N[MT]PD{I|L}[MD];[DP][MT]GGPD{I|L}[MD];[DP][WC(Carbamidomethyl (C))]PD{I|L}[MD];[NP]WDEE{I|L}[MD];[NP]DWEE{I|L}[MD] 3.5168;2.3441;1.6203;1.1531;0.85089;0.72772;0.45148;0.39743;0.36607;0.28161 -;-;-;-;-;-;-;-;-;- 386 1 1.499 68364.6 0.4900000095367431 3256 5595 8845 SUDHL4_400M_050219_2,8853 SUDHL4_400M_050219_2,8853,IDYEEMSMV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8854 48.845 599.0 234540.0 25 0 21813.0 + 1614 ALLSAALALY 10 145 503.3025827993045 1004.5906126654088 2 503.3028747439384 MULTI CID FTMS 0 0 0 8845 168893.484375 0.9854012841815823 -1 0.0623741149902343 9 Unmodified _ALLSAALALY_ nc|ENSG00000213995|Q8IW45-2|NAXD;nc|ENSG00000213995|Q8IW45|NAXD 43.85829265575387 0.1168243637355526 6 [{I|L}A][DV]K{I|L}A{I|L}Y 9 4 + 51.577 0.0 0.0 5.1341 5.1341 75.397 0.0 0.0 0.0 8.29058719264225 14.973024840566469 8.29058719264225 0.5102999566398125 0 1.0 1.6989700043360187 0.3494850021680094 0.0 [{I|L}A][DV]K{I|L}A{I|L}Y;[{I|L}A][QT]{I|L}{I|L}A{I|L}Y;[{I|L}A]{I|L}[QT]{I|L}A{I|L}Y;[{I|L}A][VS]GV{I|L}A{I|L}Y;[{I|L}A][VS]R{I|L}A{I|L}Y;[{I|L}A]G[TA]{I|L}{I|L}A{I|L}Y;[{I|L}A]{I|L}[K{I|L}]EGVY;[{I|L}A][WR]{I|L}A{I|L}Y;[{I|L}A]G[VS]V{I|L}A{I|L}Y;[K{I|L}]EGV{I|L}A{I|L}Y 5.1341;5.0833;4.983;4.8854;4.8345;4.6593;4.5107;4.441;4.4105;4.3089 -;-;-;-;-;-;-;-;-;- 1085 1 1.499 108131.0 1.0 3257 5595 8845 SUDHL4_400M_050219_2,8854 SUDHL4_400M_050219_2,8854,ALLSAALALY True True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 8855 48.859 800.0 67201.0 25 0 12025.0 -1 0 62 1035.1612320069607 3102.4618666210827 3 1035.828295886517 MULTI CID FTMS 0 0 0 8845 111985.828125 0.1543616917804661 7 -0.3960113525390625 10 6 R 1 -1 6.9897 0.0 0.0 0.2253 0.0 0.0 2131.9425217425146 811.3956281071831 2943.338149849698 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.2253 - 38 + 1 1.499 45610.9 0.4399999976158142 3258 5595 8845 SUDHL4_400M_050219_2,8855 SUDHL4_400M_050219_2,8855, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8857 48.867 253.0 299950.0 25 0 61864.0 + 31278 RLWPKIQGL 9 87 555.8427019646269 1109.6708509960538 2 555.8428222537041 MULTI CID FTMS 0 0 0 8856 119533.03125 0.1279033716297629 5 -0.2291984558105468 1 Unmodified _RLWPKIQGL_ ENSG00000168209|ENST00000307365|DDIT4 43.85829265575387 0.0542763391141878 6 [R{I|L}]WPK{I|L}QG{I|L} 9 0 + 31.549 0.0 0.0 2.8431 2.8431 79.692 0.0 0.0 0.0 2.376430167995885 13.58986191460717 2.376430167995885 9.208187539523756 0 1.124803706770636 0.0 0.0 0.0 + + [R{I|L}]WPK{I|L}QG{I|L};[R{I|L}]WPK{I|L}[AG]G{I|L};[KP][W{I|L}]R{I|L}QG{I|L} 2.8431;2.0133;0.76899 +;-;- + 216 1 1.499 60206.1 1.0 3259 5596 8856 SUDHL4_400M_050219_2,8857 SUDHL4_400M_050219_2,8857,RLWPKIQGL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8858 48.872 223.0 84434.0 25 0 6420.0 + 23991 LVVFLQPYL 9 46 546.3263569483698 1090.6381609635396 2 546.3267700076103 MULTI CID FTMS 0 0 0 8856 249017.9375 0.7211651988283357 1 -0.0443534851074218 2 Unmodified _LVVFLQPYL_ REV__ENSG00000179832|ENST00000326134|MROH1;REV__ENST00000536221.1_8:145474248-145485625:+|nuORF;REV__nc|ENSG00000179832|Q8NDA8-3|MROH1 18.13498045792455 0.3457906370836843 6 Y{I|L} 2 -1 13.325 0.0 0.0 1.2217 0.0 0.0 796.4805509555302 0.0 796.4805509555302 0.0 7.839966563652005 0.0 0.0 0 0.3494850021680094 0.0 0.0 0.0 Y{I|L} 1.2217 + + 10 + 1 1.499 18055.5 1.0 3260 5596 8856 SUDHL4_400M_050219_2,8858 SUDHL4_400M_050219_2,8858,LVVFLQPYL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8859 48.876 249.0 123100.0 25 0 9478.1 + 32556 ALWDIETGQQTT 12 62 681.8299799797046 1361.645407026209 2 681.8307983279228 MULTI CID FTMS 0 0 0 8856 219828.046875 0.8290034890164217 -1 0.079620361328125 3 Unmodified _SAQQECWRIEL_ ENST00000461893.5_1_1:1720336-1724757:-|nuORF;ENSG00000078369|ENST00000378609|GNB1;nc|ENSG00000078369|P62873-2|GNB1 10.799506525563784 0.8105043987015127 6 [{I|L}A]WD{I|L}E 6 7 30.423 0.0 0.0 2.2343 0.0 0.0 0.0 631.2646446573216 631.2646446573216 11.122527228576775 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}A]WD{I|L}E 2.2343 - 281 1 1.499 27859.4 1.0 3261 5596 8856 SUDHL4_400M_050219_2,8859 SUDHL4_400M_050219_2,8859,SAQQECWRIEL False False ALWDIETGQQTT 48.876282 681.830798327923 1398568.75 8856.0 ENST00000461893.5_1_1:1720336-1724757:-|nuORF;;ENSG00000078369|ENST00000378609|GNB1;;nc|ENSG00000078369|P62873-2|GNB1 5.6441647211710615 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8860 48.886 533.0 277980.0 25 0 17524.0 9702 FLSSDDQIL 9 154 519.2605508845237 1036.5065488358473 2 519.2610961794853 MULTI CID FTMS 0 0 0 8856 197310.40625 0.6143855116355964 -2 0.1419944763183593 4 Unmodified _FLSSDDQIL_ ENST00000443317.1_1_20:32801869-32802238:-|nuORF 24.67388899826682 0.2172451872415813 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}DDT 6 5 21.759 0.0 0.0 2.0993 0.0 0.0 0.0 355.19742090481503 355.19742090481503 4.068522400306513 0.0 0.0 0.0 0 0.0 1.154901959985743 1.3033121444636098 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}DDT 2.0993 - 398 1 1.499 115499.6 1.0 3262 5596 8856 SUDHL4_400M_050219_2,8860 SUDHL4_400M_050219_2,8860,FLSSDDQIL False True FLSNDTVQL 48.885664 519.261096179485 0.0 8856.0 nc|ENSG00000012124|P20273-2|CD22;;nc|ENSG00000012124|P20273-3|CD22;;ENSG00000012124|ENST00000085219|CD22;;nc|ENSG00000012124|P20273-4|CD22;;nc|ENSG00000012124|P20273-5|CD22 3.8212674458821616 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8861 48.891 301.0 287380.0 25 0 61717.0 + 17792 KQISVGFIGY 10 87 556.3115230052822 1110.6084930773643 2 556.3118163943291 MULTI CID FTMS 0 0 0 8856 131117.25 0.8047861134349394 -1 0.079620361328125 5 Unmodified _KQISVGFIGY_ ENSG00000134697|ENST00000373062|GNL2;ENST00000469191.1_1_1:38041920-38047841:-|nuORF 26.268140514670165 0.3785003716575977 6 {I|L}GY 3 7 31.682 0.0 0.0 2.8527 0.0 0.0 759.4292461064643 0.0 759.4292461064643 0.0 19.89970103035516 0.0 0.0 0 1.0 0.0 0.0 0.0 + {I|L}GY 2.8527 + + 92 + 1 1.499 71533.4 1.0 3263 5596 8856 SUDHL4_400M_050219_2,8861 SUDHL4_400M_050219_2,8861,KQISVGFIGY False True KQISVGFIGY 48.89118 556.311816394329 863237.875 8856.0 ENST00000469191.1_1_1:38041920-38047841:-|nuORF;;ENSG00000134697|ENST00000373062|GNL2 5.407220522562663 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8862 48.903 689.0 115290.0 25 0 8999.9 + 12071 GQFLPQTQF 9 119 533.2721423894352 0 533.2718994021416 PEAK CID FTMS 0 0 0 8856 104827.4140625 1.0 0 0.0 6 Unmodified _GQFLPQTQF_ ENSG00000100393|ENST00000263253|EP300;EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant 56.17704186161178 0.0208571546621878 6 {I|L}SVVGATH 8 8 30.527 0.0 0.0 2.8676 0.0 0.0 212.0643520622703 85.03011499576405 297.09446705803435 0.0 0.0 0.0 0.0 0 0.0 0.0 1.079689690656103 0.0 {I|L}SVVGATH 2.8676 - 328 + 1 1.499 68100.4 1.0 3264 5596 8856 SUDHL4_400M_050219_2,8862 SUDHL4_400M_050219_2,8862,GQFLPQTQF True True GQFLPQTQF 48.903162 533.271899402142 545885.125 8856.0 EP300|p.L1175Vfs*13|1|0.08|ENSG00000100393|chr22:41158433-41158434|CT/-|frameshift_variant;;ENSG00000100393|ENST00000263253|EP300 6.178352355957031 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8864 48.92 800.0 127830.0 25 0 21205.0 -1 0 95 635.3760386785548 634.3687622119547 1 635.3762695193291 MULTI CID FTMS 0 0 0 8863 127473.859375 0.0892668537336646 6 -0.330596923828125 1 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}A 6 -1 + 69.829 0.0 0.0 11.008 11.008 92.411 0.0 0.0 0.0 19.57711861032834 46.80884548956689 19.57711861032834 7.658467447160987 0 0.6747425010840047 1.5228787452803376 0.9436726795685342 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}A;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}V{I|L}VA;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}VVA;[{M(Oxidation (M))|F}V]SV{I|L}A;[{I|L}V][YG]{I|L}A;[{M(Oxidation (M))|F}V]S{I|L}VA;[{M(Oxidation (M))|F}V]TVVA;[{I|L}V]{[SA]|[TG]}[{M(Oxidation (M))|F}V];VV[TA][{M(Oxidation (M))|F}V] 11.008;9.8004;7.7565;6.8003;5.8164;5.5931;3.5492;2.0703;0.41334 -;-;-;-;-;-;-;-;- 163 1 1.499 80579.4 0.5600000023841858 3265 5597 8863 SUDHL4_400M_050219_2,8864 SUDHL4_400M_050219_2,8864, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8865 48.922 122.0 452290.0 25 0 59424.0 + 33640 SISDVIAQV 9 88 466.25856134803456 930.5025697628691 2 466.2585632205009 MULTI CID FTMS 0 0 0 8863 480915.6875 0.5852678027791556 -2 0.1239738464355468 2 Unmodified _SISDVIAQV_ ENSG00000154122|ENST00000284268|ANKH 74.42276476219924 0.019389277360085 6 {[TV]|[{I|L}S]}SDV{I|L} 6 3 46.577 0.0 0.0 5.0055 0.0 0.0 0.0 313.1514094447629 313.1514094447629 23.30050788817003 0.0 0.0 0.0 0 0.3807196863200844 2.0 1.2134679910804405 0.0 + {[TV]|[{I|L}S]}SDV{I|L} 5.0055 + + 279 1 1.499 45526.7 1.0 3266 5597 8863 SUDHL4_400M_050219_2,8865 SUDHL4_400M_050219_2,8865,SISDVIAQV True True SISDVIAQV 48.92208 466.258563220501 4436709.0 8863.0 ENSG00000154122|ENST00000284268|ANKH 5.849427064259847 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8866 48.924 97.0 651300.0 25 0 80117.0 + 1465 ALFEGKVQL 9 87 502.79220570008295 1003.569858466966 2 502.7923766970634 MULTI CID FTMS 0 0 0 8863 467670.9375 0.2201232745760175 -3 0.1863479614257812 3 Unmodified _ALFEGKVQL_ ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF;nc|ENSG00000157796|Q8NEZ3-2|WDR19 39.957323273325 0.0756908302845263 6 [{I|L}A]{M(Oxidation (M))|F}E 4 5 44.693 0.0 0.0 4.4534 0.0 0.0 0.0 540.3147384376127 540.3147384376127 19.580437297875548 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + [{I|L}A]{M(Oxidation (M))|F}E 4.4534 + + 471 + 1 1.499 53745.2 1.0 3267 5597 8863 SUDHL4_400M_050219_2,8866 SUDHL4_400M_050219_2,8866,ALFEGKVQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8867 48.938 800.0 141490.0 25 0 17717.0 + + 14634 LLLAAARLAAA 11 106 526.8395883153024 1051.6646236974047 2 527.3423950076103 MULTI CID FTMS 0 0 0 8863 137880.203125 0.508413862765932 -7 0.4378433227539062 4 Unmodified _IIIPVEQKI_ ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENSG00000167004|ENST00000300289|PDIA3;ENST00000469684.1_1_15:44038662-44048907:+|nuORF 15.847184025352805 0.4077185912009129 6 {I|L}{I|L}{I|L}[MT]AA{I|L}{I|L} 9 -1 64.103 0.0 0.0 6.0954 0.0 0.0 0.0 109.0597908857806 109.0597908857806 28.02133700068857 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.7614393726401688 0.0 {I|L}{I|L}{I|L}[MT]AA{I|L}{I|L} 6.0954 - 1013 1 1.499 87292.8 0.550000011920929 3268 5597 8863 SUDHL4_400M_050219_2,8867 SUDHL4_400M_050219_2,8867,IIIPVEQKI False False LLLAAARLAAA 48.938016 527.34239500761 2771703.0 8863.0 ENST00000471856.1_1_1:146649692-146651075:+|nuORF;;ENSG00000167004|ENST00000300289|PDIA3;;ENST00000469684.1_1_15:44038662-44048907:+|nuORF 4.949291706085205 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8868 48.952 800.0 113130.0 25 0 22702.0 + 29374 QKSVSFILRYL 11 91 677.3953176337411 1352.776082334282 2 677.3961059451103 MULTI CID FTMS 0 0 0 8863 117013.0 0.2175805798366351 -7 0.4378433227539062 5 Unmodified _QKSVSFILRYL_ REV__ENSG00000164935|ENST00000297581|DCSTAMP 2.735195868890462 0.8622431031272658 6 {I|L} 1 -1 4.6041 0.0 0.0 0.34034 0.0 0.0 748.4150116329134 488.2652732111968 1236.6802848441102 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.34034 + + 19 + 1 1.499 76476.5 0.5 3269 5597 8863 SUDHL4_400M_050219_2,8868 SUDHL4_400M_050219_2,8868,QKSVSFILRYL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8869 48.965 770.0 80137.0 25 0 7415.8 20683 LLRLEDLF 8 112 509.8024443582112 1017.5903357832224 2 509.8025085330009 MULTI CID FTMS 0 0 0 8863 96824.4375 1.0 0 0.0 6 Unmodified _LLRLEDLF_ ENSG00000221866|ENST00000321063|PLXNA4;nc|ENSG00000221866|Q9HCM2-2|PLXNA4;nc|ENSG00000221866|Q9HCM2-3|PLXNA4 19.438996006549623 0.6237395211498085 6 T{M(Oxidation (M))|F} 2 7 15.841 0.0 0.0 1.5567 0.0 0.0 751.4633959412288 0.0 751.4633959412288 0.0 4.247425010840047 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 T{M(Oxidation (M))|F} 1.5567 - 84 + 1 1.499 50870.5 1.0 3270 5597 8863 SUDHL4_400M_050219_2,8869 SUDHL4_400M_050219_2,8869,LLRLEDLF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8870 48.979 800.0 48840.0 25 0 3632.6 + -1 YLADPLGVGA 10 59 975.4610813126787 1948.9076096921576 2 975.4621459841728 MULTI CID FTMS 0 0 0 8863 92985.984375 0.2002610314122718 8 -0.3884315490722656 7 ENST00000537707.1_1_11:63993896-63994784:+|nuORF;nc|ENSG00000149761|Q9BRQ3-2|NUDT22;ENSG00000149761|ENST00000279206|NUDT22;ENST00000422364.2_1_11:63994043-63994784:+|nuORF;nc|ENSG00000149761|Q9BRQ3-3|NUDT22 6 [Q{I|L}]S[KT]DGV{M(Oxidation (M))|F}HHN 12 -1 18.874 0.0 0.0 0.96844 0.0 0.0 0.0 582.2441324795201 582.2441324795201 5.379099962974156 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [Q{I|L}]S[KT]DGV{M(Oxidation (M))|F}HHN 0.96844 - 201 1 1.499 35204.6 0.4099999964237213 3271 5597 8863 SUDHL4_400M_050219_2,8870 SUDHL4_400M_050219_2,8870, False False YLADPLGVGA 48.979028 974.9611 0.0 8863.0 ENST00000537707.1_1_11:63993896-63994784:+|nuORF;;nc|ENSG00000149761|Q9BRQ3-2|NUDT22;;ENSG00000149761|ENST00000279206|NUDT22;;ENST00000422364.2_1_11:63994043-63994784:+|nuORF;;nc|ENSG00000149761|Q9BRQ3-3|NUDT22 3.026847044626872 1.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8871 48.994 800.0 83426.0 25 0 7453.8 -1 0 91 1029.1585661183078 3084.453868955124 3 1029.493945300579 MULTI CID FTMS 0 0 0 8863 172226.90625 1.0 0 0.0 8 6 NVM{[QD]|[EN]|[WG]|[KD]|[RS]} 5 -1 35.713 0.0 0.0 1.1578 0.0 0.0 2479.151391629561 0.0 2479.151391629561 0.0 19.54512569114653 0.0 0.0 0 0.5 0.0 0.0 0.8494850021680094 NVM{[QD]|[EN]|[WG]|[KD]|[RS]} 1.1578 - 279 1 1.499 54208.7 0.5299999713897705 3272 5597 8863 SUDHL4_400M_050219_2,8871 SUDHL4_400M_050219_2,8871, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8873 49.0 59.0 885340.0 25 0 68739.0 + 31300 RLYPEGLAQL 10 68 580.3270061239972 1158.6394593147943 2 580.3273193240166 MULTI CID FTMS 0 0 0 8872 849068.5625 0.6154317468641519 1 -0.04388427734375 1 Unmodified _RLYPEGLAQL_ ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF 48.56086444690353 0.0885974549041194 6 [R{I|L}]Y[EP]G{I|L}AQ{I|L} 10 0 + 57.822 0.0 0.0 4.9905 4.9905 82.558 0.0 0.0 0.0 3.0444970792913395 41.62417585494282 3.0444970792913395 7.703259128716873 0 1.4049471895720984 0.0 0.3807196863200844 0.0 + + [R{I|L}]Y[EP]G{I|L}AQ{I|L};[VP][HV][EP]G{I|L}AQ{I|L};[R{I|L}]Y[EP]G{I|L}A[AG]{I|L};[QA][KS]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}[PG][YV]G{I|L}AQ{I|L};{[QN]|[E{I|L}]|[KN]}[PG][YR]{I|L}AQ{I|L};[VP]{[CP]|[EA]}[YR]{I|L}AQ{I|L};[R{I|L}]Y[EP][Q{I|L}]Q{I|L} 4.9905;4.3257;4.1995;4.0404;3.5731;3.0056;2.6621;2.5029 +;-;-;-;-;-;-;- + 129 1 1.499 45571.1 1.0 3273 5598 8872 SUDHL4_400M_050219_2,8873 SUDHL4_400M_050219_2,8873,RLYPEGLAQL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8874 49.014 800.0 106730.0 25 0 12473.0 + + 37838 RIDPALLTV 9 110 499.3055041395215 996.596455345843 2 499.3058044314384 MULTI CID FTMS 0 0 0 8872 99067.109375 0.1289605942422953 3 -0.0936851501464843 2 Unmodified _TLTRPPLSI_ ENSG00000188211|ENST00000338965|NCR3LG1 25.399314129420983 0.2080152500878129 6 {NN|[MP]|[D{I|L}]|[EV]}RPA{I|L}{I|L}TV 9 -1 + 38.37 0.0 0.0 3.8501 3.8501 84.715 0.0 0.0 0.0 12.428315268015744 8.824995917031945 8.824995917031945 20.478304991835405 0 0.6677353201839438 1.3010299956639813 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}RPA{I|L}{I|L}TV;[Y{I|L}][Y{I|L}]{I|L}{I|L}TV;{[QN]|[E{I|L}]|[KN]}[VP]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV;{I|L}{I|L}YY{I|L}{I|L}TV;[VP]{[RE]|[WV]}A{I|L}{I|L}TV;{NN|[MP]|[D{I|L}]|[EV]}[{I|L}P]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}TV 3.8501;1.7953;1.7317;1.4087;1.3422;0.83011 -;-;-;-;-;- 168 1 1.499 68776.8 0.8700000047683716 3274 5598 8872 SUDHL4_400M_050219_2,8874 SUDHL4_400M_050219_2,8874,TLTRPPLSI False False RIDPALLTV 49.013515 499.305804431438 8623611.0 8872.0 ENSG00000188211|ENST00000338965|NCR3LG1 4.831518809000651 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8875 49.016 97.0 456770.0 25 0 55502.0 + 26022 NLYPFVKTV 9 71 540.8080481455914 0 540.8079101443291 PEAK CID FTMS 0 0 0 8872 521485.90625 0.7627455027743058 1 -0.04388427734375 3 Unmodified _NLYPFVKTV_ ENSG00000138363|ENST00000236959|ATIC;ENST00000427397.5_1_2:216176945-216197107:+|nuORF;ENST00000443953.5_1_2:216177073-216214375:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC 32.78568957990786 0.0971838787772021 6 Y 1 8 16.237 0.0 0.0 1.504 0.0 0.0 227.12684687412985 686.3893826162715 913.5162294904014 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + Y 1.504 + + 76 + 1 1.499 38155.6 1.0 3275 5598 8872 SUDHL4_400M_050219_2,8875 SUDHL4_400M_050219_2,8875,NLYPFVKTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8876 49.02 240.0 307740.0 25 0 39730.0 -1 IMLEALERV 9 74 545.301697195708 1088.588841458216 2 545.3020507693291 MULTI CID FTMS 0 0 0 8872 247635.046875 0.6530696903566519 4 -0.180877685546875 4 Oxidation (M) _IM(Oxidation (M))LEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 33.4449034751529 0.1114409586740657 6 {I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}E[RV] 9 -1 + 58.198 0.0 0.0 5.3462 5.3462 89.846 0.0 0.0 0.0 43.047444008242906 4.137342758552691 4.137342758552691 22.870156338638587 0 1.2614393726401687 0.0 0.0 0.0 {I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}E[RV];{I|L}{M(Oxidation (M))|F}V[DV]{I|L}E[RV];{I|L}H[WH]{I|L}E[RV] 5.3462;3.2453;1.7081 +;-;- + 261 + 1 1.499 62966.6 1.0 3276 5598 8872 SUDHL4_400M_050219_2,8876 SUDHL4_400M_050219_2,8876,IMLEALERV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8877 49.034 800.0 123770.0 25 0 25301.0 37751 TLRLINKHQA 10 102 597.358093990252 1192.701635047304 2 597.3586303591728 MULTI CID FTMS 0 0 0 8872 123565.6796875 0.7982487732590716 -2 0.1355133056640625 5 Unmodified _TLRLINKHQA_ ENSG00000137877|ENST00000320955|SPTBN5 3.5964929083625545 0.7100006075494749 6 {I|L}D{I|L} 3 8 16.198 0.0 0.0 1.3581 0.0 0.0 213.2039676662476 635.2788708594396 848.4828385256872 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}D{I|L} 1.3581 - 39 + 1 1.499 75798.9 0.5199999809265137 3277 5598 8872 SUDHL4_400M_050219_2,8877 SUDHL4_400M_050219_2,8877,TLRLINKHQA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8878 49.038 226.0 232130.0 25 0 41382.0 + + 9971 RLPGGPTLTF 10 82 529.7950600304307 1057.575567127661 2 530.2989990115166 MULTI CID FTMS 0 0 0 8872 179714.828125 0.2664117825602513 3 -0.0936851501464843 6 Unmodified _FPGPRQFLP_ nc|ENSG00000130810|Q9NQ55-2|PPAN;nc|ENSG00000130810|Q9NQ55-3|PPAN;ENSG00000130810|ENST00000253107|PPAN 14.581692164780916 0.4419739649577144 6 T{M(Oxidation (M))|F} 2 -1 18.43 0.0 0.0 1.7427 0.0 0.0 791.4485357329332 0.0 791.4485357329332 0.0 -0.0841107931747942 -0.0841107931747942 0.0 0 0.4247425010840047 0.0 0.25 0.0 T{M(Oxidation (M))|F} 1.7427 - 157 + 1 1.499 48295.6 1.0 3278 5598 8872 SUDHL4_400M_050219_2,8878 SUDHL4_400M_050219_2,8878,FPGPRQFLP False False RLPGGPTLTF 49.038223 530.298999011517 727806.4375 8872.0 nc|ENSG00000130810|Q9NQ55-2|PPAN;;nc|ENSG00000130810|Q9NQ55-3|PPAN;;ENSG00000130810|ENST00000253107|PPAN 1.9753838578859968 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8880 49.049 493.0 188130.0 25 0 34665.0 + 13453 HLRHRLTV 8 102 516.3139620750118 1030.6133712168237 2 516.3143798708916 MULTI CID FTMS 0 0 0 8879 85579.34375 0.0659302946268189 7 -0.2574577331542969 1 Unmodified _HLRHRLTV_ REV__ENSG00000105429|ENST00000251268|MEGF8;REV__nc|ENSG00000105429|Q7Z7M0-2|MEGF8 5.760428011301431 0.7893668129297577 6 [H{I|L}][W{M(Oxidation (M))|F}]{I|L} 5 -1 20.458 0.0 0.0 1.985 0.0 0.0 0.0 331.231388144811 331.231388144811 9.488474775526186 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.0 0.0 [H{I|L}][W{M(Oxidation (M))|F}]{I|L} 1.985 - 39 1 1.499 79360.8 1.0 3279 5599 8879 SUDHL4_400M_050219_2,8880 SUDHL4_400M_050219_2,8880,HLRHRLTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8881 49.055 305.0 197740.0 25 0 15560.0 + 9378 FIQDHLVSL 9 115 536.2946102531242 0 536.2953979372978 PEAK CID FTMS 0 0 0 8879 113597.875 1.0 0 0.0 2 Unmodified _FIQDHLVSL_ ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42|TTN;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant 22.736283301280096 0.1762661025464585 6 V{I|L}{M(Oxidation (M))|F}{I|L} 4 7 17.779 0.0 0.0 1.6607 0.0 0.0 218.1277814419921 377.1206453912719 595.248426833264 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{I|L}{M(Oxidation (M))|F}{I|L} 1.6607 - 107 + 1 1.499 49729.0 1.0 3280 5599 8879 SUDHL4_400M_050219_2,8881 SUDHL4_400M_050219_2,8881,FIQDHLVSL False True FIQDHLVSL 49.055075 536.295397937298 0.0 8879.0 nc|ENSG00000155657|Q8WZ42-13|TTN;;nc|ENSG00000155657|Q8WZ42-4|TTN;;nc|ENSG00000155657|Q8WZ42-12|TTN;;nc|ENSG00000155657|Q8WZ42-5|TTN;;nc|ENSG00000155657|Q8WZ42-11|TTN;;TTN|p.F25901Lfs*37|1|0.45|ENSG00000155657|chr2:178563503-178563506|TCTG/-|frameshift_variant;;nc|ENSG00000155657|Q8WZ42-2|TTN;;ENSG00000155657|ENST00000589042|TTN;;nc|ENSG00000155657|Q8WZ42-7|TTN;;nc|ENSG00000155657|Q8WZ42|TTN;;nc|ENSG00000155657|Q8WZ42-8|TTN 4.108429670333862 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8882 49.069 800.0 207050.0 25 0 41391.0 + 20539 LLLSNVFMSC 10 133 563.7853042807603 1125.5560556283206 2 563.7848388552666 MULTI CID FTMS 0 0 0 8879 97128.34375 0.0987298028584915 -4 0.2590179443359375 3 Unmodified _LLLSNVFMSC_ REV__ENSG00000115368|ENST00000314761|WDR75;REV__ENST00000436347.5_1_2:190313199-190340140:+|nuORF 29.84058131909904 0.2982332456971691 6 {I|L}{I|L}DGK{I|L}{M(Oxidation (M))|F} 7 -1 74.931 0.0 0.0 6.6572 0.0 0.0 0.0 336.06931482486567 336.06931482486567 41.43360470484352 0.0 0.0 0.0 0 1.8684151806525389 2.0 0.3807196863200844 0.0 {I|L}{I|L}DGK{I|L}{M(Oxidation (M))|F} 6.6572 - 1295 + 1 1.499 128872.3 0.4600000083446502 3281 5599 8879 SUDHL4_400M_050219_2,8882 SUDHL4_400M_050219_2,8882,LLLSNVFMSC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8884 49.074 134.0 516160.0 25 0 131450.0 + 1599 ALLKIEGVYA 10 81 538.8213450085823 1075.6281370839645 2 538.8215209841728 MULTI CID FTMS 0 0 0 8883 525326.0625 0.2565795619095694 3 -0.16485595703125 1 Unmodified _ALLKIEGVYA_ ENSG00000182899|ENST00000647248|RPL35A;ENST00000329092.12_1_3:197677808-197679492:+|nuORF;ENST00000485439.5_1_3:197677808-197681048:+|nuORF 29.28111348798908 0.310803607902986 6 [{I|L}A]{I|L}K{I|L}EGVYA 10 0 + 57.815 0.0 0.0 5.375 5.375 81.956 0.0 0.0 0.0 19.286662482156338 32.40926274548464 19.286662482156338 4.948500216800937 0 1.524227503252014 1.6989700043360187 0.0 0.0 + + [{I|L}A]{I|L}K{I|L}EGVYA;[{I|L}A]{I|L}[QT]{I|L}A{I|L}YA;[{I|L}A][DV]K{I|L}A{I|L}YA;[{I|L}A]{I|L}K[DV]A{I|L}YA;[{I|L}A]{I|L}K[VG]E{I|L}YA;[{I|L}A]{I|L}K{I|L}[DG]{I|L}YA;[{I|L}A]{I|L}[VG]KE{I|L}YA;[{I|L}A]{I|L}K{I|L}EK{[{M(Oxidation (M))|F}D]|MM};[{I|L}A]{I|L}[QT]VVVYA;[{I|L}A][VS][VG]{I|L}A{I|L}YA 5.375;4.915;4.8409;4.6351;4.3552;4.1915;3.9853;3.8197;3.7315;3.709 +;-;-;-;-;-;-;-;-;- + 737 1 1.499 58471.5 1.0 3282 5600 8883 SUDHL4_400M_050219_2,8884 SUDHL4_400M_050219_2,8884,ALLKIEGVYA False True ALLKIEGVYA 49.074188 538.821520984173 20558074.0 8883.0 ENSG00000182899|ENST00000647248|RPL35A;;ENST00000485439.5_1_3:197677808-197681048:+|nuORF;;ENST00000329092.12_1_3:197677808-197679492:+|nuORF 5.26982577641805 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8885 49.088 800.0 139780.0 25 0 26940.0 9542 FLGLISIDRYL 11 140 655.3820952773966 1308.7496376215931 2 655.3812133669853 MULTI CID FTMS 0 0 0 8883 125656.421875 0.1513923331653875 9 -0.3703804016113281 2 Unmodified _FLGLISIDRYL_ ENSG00000138271|ENST00000260843|GPR87 5.731851221503515 0.8481046878870278 6 Q 1 11 9.2694 0.0 0.0 0.70826 0.0 0.0 1162.6801623792087 0.0 1162.6801623792087 0.0 0.7745097999287154 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.70826 - 185 + 1 1.499 100785.9 0.6000000238418579 3283 5600 8883 SUDHL4_400M_050219_2,8885 SUDHL4_400M_050219_2,8885,FLGLISIDRYL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8887 49.098 318.0 231690.0 25 0 32177.0 + 14632 IIIPEIQKV 9 79 526.8395883153024 1051.6646236974047 2 526.8394653201103 MULTI CID FTMS 0 0 0 8886 166279.78125 0.4226897509262158 -3 0.0936851501464843 1 Unmodified _IIIPEIQKV_ ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;nc|ENSG00000124207|P55060-3|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L 34.40172386719151 0.1061884637610825 6 {I|L}{I|L}{I|L}PE{I|L}QKV 9 0 + 46.381 0.0 0.0 4.4102 4.4102 77.006 0.0 0.0 0.0 7.95857860592772 3.1078983295313733 3.1078983295313733 3.1078983295313733 0 0.8252574989159953 1.6989700043360187 0.0 0.5 + + {I|L}{I|L}{I|L}PE{I|L}QKV;{I|L}{I|L}{I|L}PE{I|L}N[K{I|L}];{I|L}{I|L}{I|L}PE{I|L}[AG]KV;{I|L}{I|L}{I|L}PE{I|L}GG[K{I|L}] 4.4102;4.1147;3.5346;3.2391 +;-;-;- + 291 + 1 1.499 63141.0 1.0 3284 5601 8886 SUDHL4_400M_050219_2,8887 SUDHL4_400M_050219_2,8887,IIIPEIQKV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8888 49.101 165.0 391850.0 25 0 42366.0 + 9507 FLDSEVSEL 9 87 519.7530815954291 1037.491610257658 2 519.7519409060478 MULTI CID FTMS 0 0 0 8886 267036.8125 0.2680610065909323 -3 0.0936851501464843 2 Unmodified _FLDSEVSEL_ ENSG00000109805|ENST00000251496|NCAPG 50.855029805455786 0.0384952370514206 6 EVCE{I|L} 5 5 26.208 0.0 0.0 2.5261 0.0 0.0 446.23594727113306 0.0 446.23594727113306 0.0 10.757659435244738 0.0 0.0 0 0.0 0.0 1.6109243748081783 0.0 EVCE{I|L} 2.5261 - 341 + 1 1.499 52685.6 1.0 3285 5601 8886 SUDHL4_400M_050219_2,8888 SUDHL4_400M_050219_2,8888,FLDSEVSEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8889 49.11 484.0 140230.0 25 0 19004.0 + 17279 KLQEEIPVL 9 82 534.8185707186935 1067.622588504187 2 534.8185302615166 MULTI CID FTMS 0 0 0 8886 184257.34375 0.5572882955975224 -2 0.0498008728027343 3 Unmodified _KLQEEIPVL_ ENSG00000138778|ENST00000265148|CENPE;nc|ENSG00000138778|Q02224-3|CENPE 52.268347100219714 0.0353964759249114 6 {I|L}K{I|L}PV{I|L} 6 4 43.589 0.0 0.0 4.0828 0.0 0.0 386.1430836408219 0.0 386.1430836408219 0.0 17.64645333192 0.0 0.0 0 1.1677353201839438 0.0 0.0 0.3494850021680094 {I|L}K{I|L}PV{I|L} 4.0828 - 239 1 1.499 63757.0 1.0 3286 5601 8886 SUDHL4_400M_050219_2,8889 SUDHL4_400M_050219_2,8889,KLQEEIPVL True True KLQEEIPVL 49.109508 534.818530261517 2373247.5 8886.0 nc|ENSG00000138778|Q02224-3|CENPE;;ENSG00000138778|ENST00000265148|CENPE 3.3119727770487466 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8890 49.116 377.0 303530.0 25 0 19106.0 + 1848 ALVDQRELYL 10 110 610.3388875803314 1218.6632222274627 2 610.3368408083916 MULTI CID FTMS 0 0 0 8886 200706.8125 1.0 0 0.0 4 Unmodified _ALVDQRELYL_ ENSG00000167515|ENST00000696289|TRAPPC2L;ENST00000561840.1_2_16:88923580-88926055:+|nuORF;ENST00000564547.1_1_16:88923507-88925305:+|nuORF;ENST00000565309.1_1_16:88925068-88926212:+|nuORF;nc|ENSG00000167515|Q9UL33|TRAPPC2L 55.23464941255904 0.0494277333541689 6 [{I|L}A]AA[WD]{I|L}A{I|L}Y{I|L} 11 5 + 45.679 0.0 0.0 3.7482 3.7482 70.597 0.0 0.0 0.0 0.1343853085398549 6.525141560458067 0.1343853085398549 0.1343853085398549 0 0.9247425010840048 2.0 0.2742275032520141 0.0 [{I|L}A]AA[WD]{I|L}A{I|L}Y{I|L};[Y{I|L}][H{I|L}]DVA{I|L}Y{I|L};[{I|L}A][MT][NP]{I|L}A{I|L}Y{I|L};[{I|L}A]AA[WE]VA{I|L}Y{I|L};[{I|L}A][MT][QP]VA{I|L}Y{I|L};[{I|L}A]AA[WD]{I|L}{I|L}AY{I|L};[Y{I|L}][H{I|L}]DV{I|L}AY{I|L};[Y{I|L}][H{I|L}]RE{I|L}Y{I|L};[{I|L}A][MT][NP]{I|L}{I|L}AY{I|L};[{I|L}A]AA[WE]V{I|L}AY{I|L} 3.7482;3.7372;3.6457;3.4583;3.3557;3.3018;3.2908;3.2012;3.1993;3.0118 -;-;-;-;-;-;-;-;-;- 442 1 1.499 85816.1 1.0 3287 5601 8886 SUDHL4_400M_050219_2,8890 SUDHL4_400M_050219_2,8890,ALVDQRELYL True True ALVDQRELYL 49.1163 610.336840808392 1182004.375 8886.0 ENST00000561840.1_2_16:88923580-88926055:+|nuORF;;ENST00000565309.1_1_16:88925068-88926212:+|nuORF;;ENSG00000167515|ENST00000696289|TRAPPC2L;;ENST00000564547.1_1_16:88923507-88925305:+|nuORF;;nc|ENSG00000167515|Q9UL33|TRAPPC2L 6.435891787211101 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8891 49.123 400.0 194990.0 25 0 18800.0 + 9719 FLWKEPATM 9 113 569.7835518280638 1137.5525507229274 2 569.7840453982353 MULTI CID FTMS 0 0 0 8886 127207.40625 0.5865166936585422 -7 0.3711929321289062 5 Oxidation (M) _FLWKEPATM(Oxidation (M))_ ENSG00000141002|ENST00000263346|TCF25;ENST00000570116.6_1_16:89971082-89977643:+|nuORF 96.11092074494114 0.0124975504059861 6 PAT{M(Oxidation (M))|F} 4 5 38.73 0.0 0.0 3.4047 0.0 0.0 703.3690315827588 0.0 703.3690315827588 0.0 -0.0161214901335426 -0.0161214901335426 0.0 0 1.25 0.0 0.7302046884880937 0.0 + PAT{M(Oxidation (M))|F} 3.4047 + + 747 + 1 1.499 61869.1 1.0 3288 5601 8886 SUDHL4_400M_050219_2,8891 SUDHL4_400M_050219_2,8891,FLWKEPATM True False FLWKEPATM 49.123467 569.784045398235 4077484.75 8886.0 ENSG00000141002|ENST00000263346|TCF25;;ENST00000570116.6_1_16:89971082-89977643:+|nuORF 7.092307090759277 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8892 49.137 800.0 57981.0 25 0 11129.0 + 22774 LQQRKQTEPLL 11 85 451.9325839143515 1352.7759223432545 3 451.9326354861259 MULTI CID FTMS 0 0 0 8886 121320.7578125 0.7479984648000796 -7 0.3711929321289062 6 Unmodified _LQQRKQTEPLL_ REV__ENSG00000100249|ENST00000216071|C22orf31 1.1933415558491238 0.8695176722560516 6 V 1 -1 9.9148 0.0 0.0 0.73293 0.0 0.0 1235.6968188049716 0.0 1235.6968188049716 0.0 0.2371232496406872 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.73293 - 13 + 1 1.499 49466.0 0.959999978542328 3289 5601 8886 SUDHL4_400M_050219_2,8892 SUDHL4_400M_050219_2,8892,LQQRKQTEPLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8893 49.151 800.0 76481.0 25 0 20726.0 + 20342 LLFLTPLFFLF 11 77 685.908427539094 1369.8023021449878 2 685.9090453982353 MULTI CID FTMS 0 0 0 8886 105238.8828125 0.5329610204179818 -5 0.2291984558105468 7 Unmodified _LLFLTPLFFLF_ REV__ENST00000524717.5_1_11:96075063-96075294:-|nuORF 1.4819007175156935 0.86815623132643 6 {M(Oxidation (M))|F} 1 -1 9.7539 0.0 0.0 0.71207 0.0 0.0 1204.722801878189 0.0 1204.722801878189 0.0 7.279659778248622 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.71207 + + 4 + 1 1.499 55331.6 0.4799999892711639 3290 5601 8886 SUDHL4_400M_050219_2,8893 SUDHL4_400M_050219_2,8893,LLFLTPLFFLF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8894 49.161 587.0 89735.0 25 0 6348.0 -1 VMAPRTVLL 9 102 508.3018625351411 1014.5891721370822 2 508.3031799197197 MULTI CID FTMS 0 0 0 8886 89632.9453125 0.0149480521496103 33 -1.5372085571289062 8 Oxidation (M) _VM(Oxidation (M))APRTVLL_ ENSG00000234745|ENST00000412585|HLA-B;ENST00000434333.1_1_6:31324722-31324935:-|nuORF;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;HLA-B|p.W298Mfs*36|1|0.54|ENSG00000234745|chr6:31355320-31355321|-/T|frameshift_variant 10.823927491677226 0.5436922275383211 6 [{M(Oxidation (M))|F}V]AN 4 -1 32.774 0.0 0.0 3.2302 0.0 0.0 0.0 580.3731741724915 580.3731741724915 6.086590976516433 0.0 0.0 0.0 0 1.0 0.958607314841775 0.0 0.0 [{M(Oxidation (M))|F}V]AN 3.2302 - 164 1 1.499 45254.8 1.0 3291 5601 8886 SUDHL4_400M_050219_2,8894 SUDHL4_400M_050219_2,8894,VMAPRTVLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8895 49.175 800.0 61111.0 25 0 9847.3 + 30632 RFLPRFLMFL 10 67 670.3873182966566 1338.7600836601132 2 670.3881103396416 MULTI CID FTMS 0 0 0 8886 84613.265625 0.7113985972232558 -1 0.01910400390625 9 Unmodified _RFLPRFLMFL_ REV__ENSG00000213088|ENST00000368122|ACKR1;REV__nc|ENSG00000213088|Q16570-2|ACKR1 3.944395688203298 0.708391353636983 6 {I|L} 1 -1 10.379 0.0 0.0 0.77524 0.0 0.0 1207.6654161569866 0.0 1207.6654161569866 0.0 4.849731587249231 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.77524 + + 20 + 1 1.499 46183.2 0.4399999976158142 3292 5601 8886 SUDHL4_400M_050219_2,8895 SUDHL4_400M_050219_2,8895,RFLPRFLMFL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8897 49.185 322.0 231480.0 25 0 83695.0 -1 0 82 398.1941873945734 397.18691092797343 1 398.1938964724541 MULTI CID FTMS 0 0 0 8896 197556.078125 0.9707629912296036 -2 0.1062965393066406 1 6 {I|L} 1 -1 10.596 0.0 0.0 2.6677 0.0 0.0 266.0920145430109 0.0 266.0920145430109 0.0 3.672444625985685 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 2.6677 - 8 + 1 1.499 63511.1 1.0 3293 5602 8896 SUDHL4_400M_050219_2,8897 SUDHL4_400M_050219_2,8897, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8898 49.188 183.0 411090.0 25 0 70247.0 + -1 PVPVPCSKKV 10 75 555.8189406496263 1109.6233283660524 2 555.8190795779228 MULTI CID FTMS 0 0 0 8896 266167.3125 0.6829491045656101 -2 0.1062965393066406 2 Carbamidomethyl (C) _PVPVPC(Carbamidomethyl (C))SKKV_ REV__ENSG00000083290|ENST00000395544|ULK2;REV__ENST00000571177.5_1_17:19720062-19744836:-|nuORF 24.020572477871973 0.4289996903560794 6 G{I|L}{M(Oxidation (M))|F}VK 5 -1 41.801 0.0 0.0 3.7671 0.0 0.0 547.2743426256212 0.0 547.2743426256212 0.0 14.560279159398204 0.0 0.0 0 2.0 0.0 0.0 0.3252574989159953 G{I|L}{M(Oxidation (M))|F}VK 3.7671 - 227 + 1 1.499 60214.3 1.0 3294 5602 8896 SUDHL4_400M_050219_2,8898 SUDHL4_400M_050219_2,8898,PVPVPCSKKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8899 49.196 393.0 214710.0 25 0 41854.0 + 19950 LIDVYDEIF 9 108 376.19478602866576 0 376.1927062869072 PEAK CID FTMS 0 0 0 8896 233998.90625 1.0 0 0.0 3 Unmodified _LIDVYDEIF_ REV__ENSG00000198604|ENST00000360310|BAZ1A;REV__nc|ENSG00000198604|Q9NRL2-2|BAZ1A 15.847184025352805 0.2451986057151378 6 C{I|L}{I|L}D 4 -1 11.732 0.0 0.0 1.5634 0.0 0.0 121.05954168448154 182.0938509576781 303.1533926421597 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6694451763165201 0.0 C{I|L}{I|L}D 1.5634 - 60 + 1 1.499 73165.8 1.0 3295 5602 8896 SUDHL4_400M_050219_2,8899 SUDHL4_400M_050219_2,8899,LIDVYDEIF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8900 49.2 244.0 254030.0 25 0 23484.0 + 34906 SQIEADFRL 9 92 539.7794619817324 1077.5443710302648 2 539.7787963747978 MULTI CID FTMS 0 0 0 8896 165327.390625 0.9965273490568926 -1 0.0871925354003906 4 Unmodified _SQIEADFRL_ ENSG00000198900|ENST00000361337|TOP1 28.49450938151212 0.1686335738423394 6 {[QS]|[NT]}{I|L}EAD 6 3 49.24 0.0 0.0 4.5696 0.0 0.0 0.0 431.241360216124 431.241360216124 24.80259828933836 0.0 0.0 0.0 0 1.0 0.958607314841775 0.4247425010840047 0.0 + {[QS]|[NT]}{I|L}EAD 4.5696 + + 209 + 1 1.499 50640.3 1.0 3296 5602 8896 SUDHL4_400M_050219_2,8900 SUDHL4_400M_050219_2,8900,SQIEADFRL False True SQIEADFRL 49.200062 539.778796374798 926558.5 8896.0 ENSG00000198900|ENST00000361337|TOP1 5.25869099299113 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8901 49.214 800.0 94479.0 25 0 16950.0 + 22854 LSAARYALL 9 104 489.29245527464224 976.5703576160844 2 489.2927429080009 MULTI CID FTMS 0 0 0 8896 88045.6640625 0.7652285807231856 -1 0.0871925354003906 5 Unmodified _LSAARYALL_ ENSG00000124067|ENST00000316341|SLC12A4;ENSG00000124140|ENST00000243964|SLC12A5;nc|ENSG00000124067|Q9UP95-2|SLC12A4;nc|ENSG00000124067|Q9UP95-3|SLC12A4;nc|ENSG00000124067|Q9UP95-4|SLC12A4;nc|ENSG00000124067|Q9UP95-5|SLC12A4;nc|ENSG00000124067|Q9UP95-6|SLC12A4;nc|ENSG00000124067|Q9UP95-7|SLC12A4;nc|ENSG00000124140|Q9H2X9|SLC12A5 32.30548876998284 0.1201446275138228 6 {[VA]|[{I|L}G]}GHPSA{I|L}{I|L}{I|L} 10 6 + 48.506 0.0 0.0 4.9669 4.9669 79.872 0.0 0.0 0.0 4.3933269383026285 8.507112333562858 4.3933269383026285 4.3933269383026285 0 0.6549471895720985 1.5228787452803376 0.3252574989159953 0.0 {[VA]|[{I|L}G]}GHPSA{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}HPSA{I|L}{I|L}{I|L};{[VA]|[{I|L}G]}GHPS{I|L}A{I|L}{I|L};[HN]{I|L}PSA{I|L}{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}HPS{I|L}A{I|L}{I|L};[HN]{I|L}PS{I|L}A{I|L}{I|L};[HN]P{I|L}SA{I|L}{I|L}{I|L};[HN]PS{I|L}A{I|L}{I|L}{I|L};[{I|L}A]S[HN]P{I|L}{I|L}{I|L};[HN]P{I|L}S{I|L}A{I|L}{I|L} 4.9669;4.5171;4.5032;4.3679;4.0533;3.9041;3.6521;3.4718;3.2104;3.1884 -;-;-;-;-;-;-;-;-;- 697 1 1.499 61724.9 0.4000000059604645 3297 5602 8896 SUDHL4_400M_050219_2,8901 SUDHL4_400M_050219_2,8901,LSAARYALL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8902 49.224 555.0 169200.0 25 0 20116.0 + 1801 ALSQDIPEI 9 107 493.26332503067846 984.5120971281568 2 493.2634765505791 MULTI CID FTMS 0 0 0 8896 151128.65625 0.6403651476061569 -5 0.2720375061035156 6 Unmodified _ALSQDIPEI_ ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4 49.93300154707207 0.0405168250806675 6 [{I|L}A]DGSA{I|L} 7 5 44.179 0.0 0.0 4.4874 0.0 0.0 0.0 354.1658964672609 354.1658964672609 18.95705707750807 0.0 0.0 0.0 0 0.5 1.6989700043360187 1.2302046884880935 0.0 [{I|L}A]DGSA{I|L} 4.4874 - 502 1 1.499 77714.3 1.0 3298 5602 8896 SUDHL4_400M_050219_2,8902 SUDHL4_400M_050219_2,8902,ALSQDIPEI True True ALSQDIPEI 49.223608 493.263476550579 1943708.625 8896.0 ENSG00000038358|ENST00000358933|EDC4;;nc|ENSG00000038358|Q6P2E9-2|EDC4 1.702255646387736 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8903 49.234 580.0 242340.0 25 0 58771.0 -1 0 56 627.3672966543372 626.3600201877372 1 627.3678466677666 MULTI CID FTMS 0 0 0 8896 131083.65625 0.5648352923877231 -2 0.1062965393066406 7 6 S 1 -1 1.5938 0.0 0.0 0.25445 0.0 0.0 157.09923024808717 379.1990755670532 536.2983058151403 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.25445 - 15 + 1 1.499 107058.3 1.0 3299 5602 8896 SUDHL4_400M_050219_2,8903 SUDHL4_400M_050219_2,8903, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8905 49.239 143.0 336370.0 25 0 39425.0 + 1466 ALFEGKVQL 9 73 502.79220570008295 1003.569858466966 2 502.7924682497978 MULTI CID FTMS 0 0 0 8904 373854.46875 0.1759657555717312 3 -0.0619049072265625 1 Unmodified _ALFEGKVQL_ ENSG00000157796|ENST00000399820|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF;nc|ENSG00000157796|Q8NEZ3-2|WDR19 32.30548876998284 0.1201446275138228 6 [{I|L}A]{M(Oxidation (M))|F}E 4 5 44.253 0.0 0.0 4.4095 0.0 0.0 0.0 540.314796515595 540.314796515595 14.365385621430722 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.0 + [{I|L}A]{M(Oxidation (M))|F}E 4.4095 + + 294 + 1 1.499 41673.9 1.0 3300 5603 8904 SUDHL4_400M_050219_2,8905 SUDHL4_400M_050219_2,8905,ALFEGKVQL True True ALFEGKVQL 49.239187 502.792468249798 21646682.0 8904.0 ENST00000512095.5_1_4:39217537-39276579:+|nuORF;;nc|ENSG00000157796|Q8NEZ3-2|WDR19;;ENSG00000157796|ENST00000399820|WDR19 4.096642255783081 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8906 49.242 121.0 241060.0 25 0 70681.0 + 10267 FQVKLLYRMR 10 51 677.3953176337411 1352.776082334282 2 677.3956176638603 MULTI CID FTMS 0 0 0 8904 450707.3125 0.8380706279675036 -1 0.0585594177246093 2 Unmodified _FQVKLLYRMR_ REV__ENSG00000129484|ENST00000429687|PARP2;REV__nc|ENSG00000129484|Q9UGN5|PARP2 0.4007161486938917 0.7247829448918255 6 N 1 -1 4.6041 0.0 0.0 0.34034 0.0 0.0 912.5454742793978 323.1705416315063 1235.7160159109042 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.34034 - 1 + 1 1.499 35753.3 1.0 3301 5603 8904 SUDHL4_400M_050219_2,8906 SUDHL4_400M_050219_2,8906,FQVKLLYRMR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8907 49.246 214.0 306180.0 25 0 53105.0 + 15674 IQPGRGFVLY 10 60 575.3241014157503 1148.6336498983003 2 575.3245117068291 MULTI CID FTMS 0 0 0 8904 250655.859375 0.4835514482723031 -4 0.1955528259277343 3 Unmodified _IQPGRGFVLY_ ENSG00000168002|ENST00000301788|POLR2G;ENST00000526368.1_1_11:62530297-62533976:+|nuORF;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 16.565877749689598 0.5695826726197942 6 {I|L}Q{I|L}Y 4 6 38.175 0.0 0.0 3.3235 0.0 0.0 613.3332686143569 0.0 613.3332686143569 0.0 26.18562527100117 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}Q{I|L}Y 3.3235 - 47 1 1.499 54184.6 1.0 3302 5603 8904 SUDHL4_400M_050219_2,8907 SUDHL4_400M_050219_2,8907,IQPGRGFVLY False True IQPGRGFVLY 49.245772 575.324511706829 3101354.75 8904.0 ENST00000526368.1_1_11:62530297-62533976:+|nuORF;;ENSG00000168002|ENST00000301788|POLR2G;;ENST00000527435.5_1_11:62529161-62533976:+|nuORF 1.401437133550644 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8908 49.252 361.0 161070.0 25 0 24546.0 -1 0 80 517.2998858020671 516.2926093354671 1 517.3006469607353 MULTI CID FTMS 0 0 0 8904 143602.84375 1.0 0 0.0 4 6 {M(Oxidation (M))|F}V 2 -1 16.198 0.0 0.0 3.1373 0.0 0.0 252.14505912506564 0.0 252.14505912506564 0.0 4.960762528683702 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}V 3.1373 - 21 + 1 1.499 51606.2 1.0 3303 5603 8904 SUDHL4_400M_050219_2,8908 SUDHL4_400M_050219_2,8908, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8910 49.264 436.0 242900.0 25 0 21490.0 + + 10345 YAFNGTQRFL 10 94 609.3007742427674 1216.5869955523349 2 609.3015014529228 MULTI CID FTMS 0 0 0 8909 150438.234375 1.0 0 0.0 1 Unmodified _FSFRGTENFI_ ENST00000469120.1_1_6:33043797-33048717:+|nuORF;ENST00000471184.5_1_6:33048250-33051373:+|nuORF;ENSG00000223865|ENST00000418931|HLA-DPB1 22.736283301280096 0.4578556481593033 6 YA{M(Oxidation (M))|F}DGTQR{M(Oxidation (M))|F}{I|L} 10 -1 + 86.417 0.0 0.0 7.1032 7.1032 90.261 0.0 0.0 0.0 64.09975461785223 7.210960721176974 7.210960721176974 9.164539485499247 0 0.805462187404089 2.0 0.7302046884880937 0.0 YA{M(Oxidation (M))|F}DGTQR{M(Oxidation (M))|F}{I|L};YA{M(Oxidation (M))|F}DGT[AG]R{M(Oxidation (M))|F}{I|L} 7.1032;6.3499 -;- 305 + 1 1.499 85659.6 1.0 3304 5604 8909 SUDHL4_400M_050219_2,8910 SUDHL4_400M_050219_2,8910,FSFRGTENFI False False YAFNGTQRFL 49.263936 609.301501452923 0.0 8909.0 ENST00000469120.1_1_6:33043797-33048717:+|nuORF;;ENST00000471184.5_1_6:33048250-33051373:+|nuORF;;ENSG00000223865|ENST00000418931|HLA-DPB1 6.60085391998291 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8911 49.278 800.0 114000.0 25 0 7324.2 -1 0 77 807.4019729613506 3225.578785979002 4 807.9037353396416 MULTI CID FTMS 0 0 0 8909 96151.6640625 1.0 0 0.0 2 6 {I|L}NP{[QV]|[N{I|L}]|[RA]|[KV]} 5 -1 28.456 0.0 0.0 0.88219 0.0 0.0 2656.314381739868 0.0 2656.314381739868 0.0 12.25772496747986 0.0 0.0 0 0.5 0.0 0.0 0.4247425010840047 {I|L}NP{[QV]|[N{I|L}]|[RA]|[KV]} 0.88219 - 165 1 1.499 73950.7 0.4300000071525574 3305 5604 8909 SUDHL4_400M_050219_2,8911 SUDHL4_400M_050219_2,8911, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8912 49.292 800.0 88080.0 25 0 6154.3 + 31301 RLYPEGLAQL 10 106 580.3270061239972 1158.6394593147943 2 580.3285400271416 MULTI CID FTMS 0 0 0 8909 87311.5625 0.063286181828 7 -0.2582893371582031 3 Unmodified _RLYPEGLAQL_ ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF 23.96415052054722 0.4302674029938662 6 G{I|L}AQ{I|L} 5 5 39.706 0.0 0.0 3.427 0.0 0.0 658.3477650373062 0.0 658.3477650373062 0.0 18.69280313679916 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 + G{I|L}AQ{I|L} 3.427 + + 233 1 1.499 58165.5 0.449999988079071 3306 5604 8909 SUDHL4_400M_050219_2,8912 SUDHL4_400M_050219_2,8912,RLYPEGLAQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8915 49.312 800.0 91395.0 25 0 8244.5 + 33529 SILEDPPSI 9 116 485.7577085905546 0 485.7580139040947 PEAK CID FTMS 0 0 0 8914 60553.13671875 0.2946629586819564 24 -1.139728546142578 1 Unmodified _SILEDPPSI_ ENSG00000064102|ENST00000261191|INTS13;nc|ENSG00000064102|Q9NVM9-2|INTS13 46.020951573049366 0.0425517664003206 6 PSP 3 7 19.085 0.0 0.0 1.9686 0.0 0.0 557.2687358575084 128.0717714899047 685.3405073474131 0.0 0.0 0.0 0.0 0 0.8807196863200843 0.0 0.4247425010840047 0.0 PSP 1.9686 - 126 + 1 1.499 61484.2 0.4099999964237213 3307 5606 8914 SUDHL4_400M_050219_2,8915 SUDHL4_400M_050219_2,8915,SILEDPPSI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8916 49.326 800.0 95530.0 25 0 19196.0 + 37163 TIAQLVHAV 9 97 476.2850538483223 950.5555547634444 2 476.2850829958916 MULTI CID FTMS 0 0 0 8914 90661.5234375 0.7717237166350653 -1 0.0040702819824218 2 Unmodified _TIAQLVHAV_ ENSG00000160208|ENST00000340648|RRP1B;nc|ENSG00000160208|Q14684-2|RRP1B 23.1484247019978 0.2366544122328345 6 [{I|L}T]AQ{I|L}V 6 3 32.58 0.0 0.0 3.4275 0.0 0.0 0.0 322.1518470574214 322.1518470574214 18.15552802072581 0.0 0.0 0.0 0 0.5924778212679485 2.0 0.0 0.0 + [{I|L}T]AQ{I|L}V 3.4275 + + 151 + 1 1.499 62012.3 0.4000000059604645 3308 5606 8914 SUDHL4_400M_050219_2,8916 SUDHL4_400M_050219_2,8916,TIAQLVHAV False True TIAQLVHAV 49.325851 476.285082995892 500910.71875 8914.0 nc|ENSG00000160208|Q14684-2|RRP1B;;ENSG00000160208|ENST00000340648|RRP1B 5.53230349222819 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8917 49.34 800.0 132160.0 25 0 15662.0 + 40812 VLLSTIHEL 9 105 512.8058799352502 1023.5972069373004 2 512.8057739138603 MULTI CID FTMS 0 0 0 8914 85387.4453125 0.5454920911182395 -1 0.0040702819824218 3 Unmodified _VLLSTIHEL_ ENSG00000163634|ENST00000295899|THOC7 67.34385681178166 0.0221257235307089 6 V{I|L}{I|L}ST{I|L}N 7 3 75.425 0.0 0.0 7.3687 0.0 0.0 0.0 280.1307161920532 280.1307161920532 46.44138788323808 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.8494850021680094 0.0 V{I|L}{I|L}ST{I|L}N 7.3687 - 856 + 1 1.499 88327.4 0.4099999964237213 3309 5606 8914 SUDHL4_400M_050219_2,8917 SUDHL4_400M_050219_2,8917,VLLSTIHEL True True VLLSTIHEL 49.339684 512.80577391386 782703.875 8914.0 ENSG00000163634|ENST00000295899|THOC7 5.221825917561849 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8919 49.346 138.0 251980.0 25 0 51223.0 + 20540 LLLSNVFMSC 10 57 563.7853042807603 1125.5560556283206 2 563.7854492068291 MULTI CID FTMS 0 0 0 8918 311286.03125 0.3164185376929659 4 -0.1708869934082031 1 Unmodified _LLLSNVFMSC_ REV__ENSG00000115368|ENST00000314761|WDR75;REV__ENST00000436347.5_1_2:190313199-190340140:+|nuORF 12.240655878213236 0.6421556946785427 6 {I|L}{I|L}D 3 -1 48.94 0.0 0.0 4.3481 0.0 0.0 0.0 781.3378389947874 781.3378389947874 16.544387449636204 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}D 4.3481 - 45 + 1 1.499 32126.3 1.0 3310 5607 8918 SUDHL4_400M_050219_2,8919 SUDHL4_400M_050219_2,8919,LLLSNVFMSC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8920 49.36 800.0 81036.0 25 0 11438.0 + 40114 VGLFIFITTWL 11 96 655.3820952773966 1308.7496376215931 2 655.3820678591728 MULTI CID FTMS 0 0 0 8918 65005.44140625 0.0783193194274463 16 -0.7407951354980469 2 Unmodified _VGLFIFITTWL_ REV__ENSG00000185873|ENST00000332644|TMPRSS11B 3.2813086475875832 0.8596665074481906 6 [Y{M(Oxidation (M))|F}]{I|L}V 4 -1 10.802 0.0 0.0 0.82537 0.0 0.0 0.0 783.4872834558306 783.4872834558306 1.1242712987804016 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [Y{M(Oxidation (M))|F}]{I|L}V 0.82537 - 66 1 1.499 58149.8 0.4600000083446502 3311 5607 8918 SUDHL4_400M_050219_2,8920 SUDHL4_400M_050219_2,8920,VGLFIFITTWL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8921 49.363 121.0 366260.0 25 0 61081.0 + 32388 RYRRLQAL 8 63 538.326923904755 1074.6392948763098 2 538.3282348513603 MULTI CID FTMS 0 0 0 8918 290387.375 0.2171131517859996 -3 0.08740234375 3 Unmodified _RYRRLQAL_ REV__ENSG00000049769|ENST00000055335|PPP1R3F 0.7936320650641473 0.8195151834710337 6 {I|L} 1 -1 11.109 0.0 0.0 1.0338 0.0 0.0 943.5444900440816 0.0 943.5444900440816 0.0 -5.088643834802156 -5.088643834802156 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0338 + + 12 + 1 1.499 39571.3 1.0 3312 5607 8918 SUDHL4_400M_050219_2,8921 SUDHL4_400M_050219_2,8921,RYRRLQAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8922 49.369 370.0 222040.0 25 0 24223.0 + 18349 KVLGIVVGV 9 98 442.3024862683276 882.5904196034552 2 442.3019897341728 MULTI CID FTMS 0 0 0 8918 203361.59375 0.6079496052411177 -2 0.0480842590332031 4 Unmodified _KVLGIVVGV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 48.345845343767074 0.0439967357579942 6 [VG]{I|L}{I|L}KVVGV 9 3 + 62.189 0.0 0.0 7.0462 7.0462 85.552 0.0 0.0 0.0 3.521825181113627 9.889917747712644 3.521825181113627 3.521825181113627 0 1.5356668758921828 1.6989700043360187 0.0 0.0 [VG]{I|L}{I|L}KVVGV;VVA{I|L}KVVGV;[VG]{I|L}K{I|L}VVGV;[VG]{I|L}{I|L}VKVGV;VVAK{I|L}VVGV;[VG]{I|L}VK{I|L}VGV;[VG]{I|L}V{I|L}KVGV;VVA{I|L}VKVGV;VVAVK{I|L}VGV;VVK{I|L}AVVGV 7.0462;6.6472;6.2543;5.9581;5.8553;5.7268;5.617;5.559;5.3278;5.2907 -;-;-;-;-;-;-;-;-;- 524 1 1.499 70223.2 1.0 3313 5607 8918 SUDHL4_400M_050219_2,8922 SUDHL4_400M_050219_2,8922,KVLGIVVGV True True KVLGIVVGV 49.369359 442.301989734173 1627680.125 8918.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 6.254716873168945 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8923 49.376 389.0 291230.0 25 0 34667.0 + 17111 KLFPETWTA 9 134 546.7902113073908 1091.5658696815815 2 546.7900878787041 MULTI CID FTMS 0 0 0 8918 123045.0078125 0.7269747449295396 -3 0.08740234375 5 Unmodified _KLFPETWTA_ ENSG00000123545|ENST00000316149|NDUFAF4 15.248480904072842 0.4239247793462406 6 {M(Oxidation (M))|F}A{[SA]|[TG]}T[KA]KP 9 8 34.522 0.0 0.0 3.1626 0.0 0.0 0.0 187.0549257867797 187.0549257867797 10.051083927183416 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.6747425010840047 0.0 {M(Oxidation (M))|F}A{[SA]|[TG]}T[KA]KP 3.1626 - 393 + 1 1.499 93139.5 1.0 3314 5607 8918 SUDHL4_400M_050219_2,8923 SUDHL4_400M_050219_2,8923,KLFPETWTA False True KLFPETWTA 49.376338 546.790087878704 2535723.75 8918.0 ENSG00000123545|ENST00000316149|NDUFAF4 6.163057486216228 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8924 49.39 800.0 67494.0 25 0 16233.0 + 30241 QWSRLRRRAGR 11 70 721.4215632345899 1440.8285735359798 2 721.4219848513603 MULTI CID FTMS 0 0 0 8918 89977.8203125 0.7079850089020939 -2 0.0480842590332031 6 Unmodified _QWSRLRRRAGR_ REV__ENST00000343028.8_3_12:27167184-27167292:-|nuORF 0.3506318815782774 0.8734936314171269 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.499 50812.0 0.4300000071525574 3315 5607 8918 SUDHL4_400M_050219_2,8924 SUDHL4_400M_050219_2,8924,QWSRLRRRAGR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8926 49.396 161.0 311320.0 25 0 37642.0 + 9508 FLDSEVSEL 9 76 519.7530815954291 1037.491610257658 2 519.7529785037041 MULTI CID FTMS 0 0 0 8925 328550.71875 0.3298108435304188 4 -0.1483230590820312 1 Unmodified _FLDSEVSEL_ ENSG00000109805|ENST00000251496|NCAPG 42.09456458481378 0.0639583784996157 6 EVCE{I|L} 5 5 25.975 0.0 0.0 2.5036 0.0 0.0 446.2371069391018 0.0 446.2371069391018 0.0 13.21052613733386 0.0 0.0 0 0.0 0.0 1.524227503252014 0.0 EVCE{I|L} 2.5036 - 134 + 1 1.499 42380.3 1.0 3316 5608 8925 SUDHL4_400M_050219_2,8926 SUDHL4_400M_050219_2,8926,FLDSEVSEL True True FLDSEVSEL 49.39589 519.752978503704 5864632.5 8925.0 ENSG00000109805|ENST00000251496|NCAPG 4.868686040242513 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8927 49.404 470.0 110170.0 25 0 13134.0 + 14633 IIIPEIQKV 9 69 526.8395883153024 1051.6646236974047 2 526.8395263552666 MULTI CID FTMS 0 0 0 8925 144892.671875 0.3683228768132486 4 -0.1483230590820312 2 Unmodified _IIIPEIQKV_ ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;nc|ENSG00000124207|P55060-3|CSE1L;nc|ENSG00000124207|P55060-4|CSE1L 24.020572477871973 0.2255576514309169 6 {I|L}{I|L}{I|L}[EP]{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 36.321 0.0 0.0 3.4537 3.4537 80.824 0.0 0.0 0.0 3.925449767853316 3.2568864632742915 3.2568864632742915 9.208187539523756 0 0.5 1.6989700043360187 0.0 0.5 + + {I|L}{I|L}{I|L}[EP]{I|L}Q{[QV]|[N{I|L}]|[RA]|[KV]};{I|L}{I|L}{I|L}[EP]{I|L}[AG]{[QV]|[N{I|L}]|[RA]|[KV]} 3.4537;2.5781 +;- + 128 + 1 1.499 46004.1 1.0 3317 5608 8925 SUDHL4_400M_050219_2,8927 SUDHL4_400M_050219_2,8927,IIIPEIQKV False True IIIPEIQKV 49.404225 526.839526355267 6000571.0 8925.0 ENSG00000124207|ENST00000262982|CSE1L;;nc|ENSG00000124207|P55060-4|CSE1L;;ENST00000469700.1_1_20:47707305-47712721:+|nuORF;;nc|ENSG00000124207|P55060-3|CSE1L 4.398561795552571 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8928 49.406 91.0 694630.0 25 0 80819.0 + -1 SMMDPNHFL 9 101 562.2307006818047 1122.446848430409 2 562.2311889529228 MULTI CID FTMS 0 0 0 8925 352490.46875 0.5843211113673629 -1 0.0504722595214843 3 2 Oxidation (M) _SM(Oxidation (M))M(Oxidation (M))DPNHFL_ nc|ENSG00000024048|Q8IWV8-3|UBR2;nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2 14.838274106304384 0.4350285940865338 6 [{I|L}T][RH]EEW 7 -1 30.59 0.0 0.0 2.7253 0.0 0.0 0.0 167.97990442089682 167.97990442089682 15.980910146099772 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}T][RH]EEW 2.7253 - 355 1 1.499 51939.7 1.0 3318 5608 8925 SUDHL4_400M_050219_2,8928 SUDHL4_400M_050219_2,8928,SMMDPNHFL False False SMMDPNHFL 49.406244 562.231188952923 2772511.25 8925.0 nc|ENSG00000024048|Q8IWV8-3|UBR2;;nc|ENSG00000024048|Q8IWV8|UBR2;;ENSG00000024048|ENST00000372901|UBR2 2.775720884402593 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8929 49.41 223.0 197780.0 25 0 32782.0 + 43172 VYSLKLTRL 9 65 546.8404984021557 1091.6664438711114 2 546.8404418826103 MULTI CID FTMS 0 0 0 8925 267484.21875 0.4943337691350508 -3 0.0985565185546875 4 Unmodified _VYSLKLTRL_ REV__chr19:55796250-55798229|20|13.2|0.07|7.56|-|ENST00000593244|NLRP11,NLRP11;REV__chr19:55801739-55807853|26|30.58|0.18|7.38|-|1|NLRP11,NLRP11|1;REV__ENSG00000179873|ENST00000589093|NLRP11;REV__nc|ENSG00000179873|P59045-3|NLRP11 1.844237919475145 0.850302753031785 6 A 1 -1 10.181 0.0 0.0 0.93262 0.0 0.0 1002.6180867927897 0.0 1002.6180867927897 0.0 3.1913608199120347 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.93262 - 13 + 1 1.499 38414.2 1.0 3319 5608 8925 SUDHL4_400M_050219_2,8929 SUDHL4_400M_050219_2,8929,VYSLKLTRL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8930 49.415 263.0 123840.0 25 0 11215.0 -1 FLWKEPATM 9 65 569.7835518280638 1137.5525507229274 2 569.7836791872978 MULTI CID FTMS 0 0 0 8925 216886.25 1.0 0 0.0 5 Oxidation (M) _FLWKEPATM(Oxidation (M))_ ENSG00000141002|ENST00000263346|TCF25;ENST00000570116.6_1_16:89971082-89977643:+|nuORF 36.12702656103203 0.0967173616627612 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[HG]|PP}[KC]WT{M(Oxidation (M))|F} 9 -1 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[HG]|PP}[KC]W + + 16.995 -7.9317 -0.91017 1.494 1.494 50.042 0.0 0.0 0.0 0.0 3.042359562158124 0.0 0.0 0 0.0 0.0 0.2302046884880938 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[HG]|PP}[KC]WT{M(Oxidation (M))|F} 1.494 - 48 + 1 1.499 28793.9 1.0 3320 5608 8925 SUDHL4_400M_050219_2,8930 SUDHL4_400M_050219_2,8930,FLWKEPATM False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8931 49.425 579.0 63358.0 25 0 12363.0 43277 WHKIRARKRC 10 85 451.9325839143515 1352.7759223432545 3 451.9325134158134 MULTI CID FTMS 0 0 0 8925 162193.859375 1.0 0 0.0 6 Unmodified _WHKIRARKRC_ ENST00000373279.5_1_10:71392915-71393320:+|nuORF 1.4819007175156935 0.719781833666733 6 {I|L} 1 9 10.713 0.0 0.0 0.79195 0.0 0.0 1221.6809649231357 0.0 1221.6809649231357 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.79195 + + 15 + 1 1.499 42903.2 1.0 3321 5608 8925 SUDHL4_400M_050219_2,8931 SUDHL4_400M_050219_2,8931,WHKIRARKRC False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8932 49.439 800.0 56310.0 25 0 13104.0 + 29579 QLRVIRWMVGL 11 72 685.908427539094 1369.8023021449878 2 685.9087402224541 MULTI CID FTMS 0 0 0 8925 125745.015625 0.6368101793647598 2 -0.0814971923828125 7 Unmodified _QLRVIRWMVGL_ REV__ENST00000392396.7_2_3:195796375-195798346:-|nuORF 1.3295316138638542 0.8688751186870782 6 K 1 -1 0.9691 0.0 0.0 0.070747 0.0 0.0 955.5570456526036 283.11863123111567 1238.6756768837192 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.070747 - 6 + 1 1.499 43788.8 0.5099999904632568 3322 5608 8925 SUDHL4_400M_050219_2,8932 SUDHL4_400M_050219_2,8932,QLRVIRWMVGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8934 49.449 297.0 174710.0 25 0 20026.0 + 8930 FAMDVYKNL 9 91 558.7733905594464 1115.5322281856927 2 558.7730590701103 MULTI CID FTMS 0 0 0 8933 177673.125 1.0 0 0.0 1 Oxidation (M) _FAM(Oxidation (M))DVYKNL_ ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF 71.92227651296345 0.0203558744033348 6 {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}DVYKN{I|L} 9 0 + 66.425 0.0 0.0 5.9545 5.9545 90.123 0.0 0.0 0.0 51.1733629591184 14.099330555070395 14.099330555070395 12.460762528683702 0 2.0356668758921828 0.0 0.0 0.6505149978319906 + + {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}DVYKN{I|L};{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}DVYKGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[WH][KA]{M(Oxidation (M))|F}{[CP]|[EA]};[QP]YY[KA]{M(Oxidation (M))|F}{[TV]|[{I|L}S]};[PG]{M(Oxidation (M))|F}SY[KA]{M(Oxidation (M))|F}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{[DA]|[EG]}{M(Oxidation (M))|F}[KA]{M(Oxidation (M))|F}{[TV]|[{I|L}S]};{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}[VS][KA]{M(Oxidation (M))|F}{[TV]|[{I|L}S]};[PG]AYY[KA]{M(Oxidation (M))|F}{[CP]|[EA]};{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}[KA]Y{[DS]|[MA]|[CV]|TT}[PA];[AG]PYY[KA]{M(Oxidation (M))|F}{[TV]|[{I|L}S]} 5.9545;4.8375;1.5899;0.88612;0.86099;0.40433;0.39291;0.34641;0.30539;0.087525 +;-;-;-;-;-;-;-;-;- + 290 + 1 1.499 43810.2 1.0 3323 5609 8933 SUDHL4_400M_050219_2,8934 SUDHL4_400M_050219_2,8934,FAMDVYKNL True False FAMDVYKNL 49.448681 558.77305907011 732913.375 8933.0 ENST00000518442.5_1_8:109247181-109261015:-|nuORF;;ENSG00000104408|ENST00000220849|EIF3E 8.371013959248861 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8935 49.45 44.0 1049200.0 25 0 68292.0 + 16927 KILDLETQL 9 86 536.8163667468381 1071.618180560476 2 536.8163329958916 MULTI CID FTMS 0 0 0 8933 1287750.625 0.634678229937367 -2 0.0996055603027343 2 Unmodified _KILDLETQL_ ENSG00000136811|ENST00000351030|ODF2;ENST00000488909.1_1_9:131260677-131262531:+|nuORF;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2 51.629811660486645 0.0367964933207742 6 D{I|L}ETQ{I|L} 6 3 59.954 0.0 0.0 5.5947 0.0 0.0 354.26317031074376 0.0 354.26317031074376 0.0 40.47228775315752 0.0 0.0 0 0.75 0.0 1.1307196863200843 0.0 + D{I|L}ETQ{I|L} 5.5947 + + 552 1 1.499 40845.6 1.0 3324 5609 8933 SUDHL4_400M_050219_2,8935 SUDHL4_400M_050219_2,8935,KILDLETQL True True KILDLETQL 49.449919 536.816332995892 8502002.0 8933.0 ENST00000488909.1_1_9:131260677-131262531:+|nuORF;;nc|ENSG00000136811|Q5BJF6-4|ODF2;;nc|ENSG00000136811|Q5BJF6|ODF2;;ENSG00000136811|ENST00000351030|ODF2;;nc|ENSG00000136811|Q5BJF6-3|ODF2;;nc|ENSG00000136811|Q5BJF6-2|ODF2 4.3329901695251465 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8936 49.464 800.0 79966.0 25 0 9301.4 + 40678 VLFENTDSVHL 11 76 637.3244115219236 1272.634270110647 2 637.3242675662041 MULTI CID FTMS 0 0 0 8933 84585.78125 0.2391900775280385 -4 0.1476898193359375 3 Unmodified _VLFENTDSVHL_ ENSG00000188739|ENST00000408888|RBM34;ENST00000495224.1_1_1:235295030-235299397:-|nuORF 79.59630418116434 0.0079568537026334 6 V{I|L}{M(Oxidation (M))|F}ENTDSV[H{I|L}] 11 0 + 115.27 0.0 0.0 9.0573 9.0573 97.639 0.0 0.0 0.0 104.29738277878332 7.367585652254178 7.367585652254178 21.87077327533113 0 0.4247425010840047 2.0 1.055462187404089 1.274227503252014 + + V{I|L}{M(Oxidation (M))|F}ENTDSV[H{I|L}];V{I|L}{M(Oxidation (M))|F}EGGTDSV[H{I|L}];V{I|L}{M(Oxidation (M))|F}ENTD{[HG]|PP}{[QN]|[E{I|L}]|[KN]};V{I|L}{M(Oxidation (M))|F}EGGTD{[HG]|PP}{[QN]|[E{I|L}]|[KN]};V{I|L}{M(Oxidation (M))|F}E[YV]{[{M(Oxidation (M))|F}D]|MM}{[QN]|[E{I|L}]|[KN]};V{I|L}{M(Oxidation (M))|F}E[YV]{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KC];V{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}M{[{M(Oxidation (M))|F}D]|MM}{[QN]|[E{I|L}]|[KN]};V{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}M{[WS]|[C(Carbamidomethyl (C)){I|L}]}[KC];V{I|L}{M(Oxidation (M))|F}[YN]V[YN]{[QN]|[E{I|L}]|[KN]};V{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}MHH{[ET]|[MV]} 9.0573;7.3388;7.1564;6.4391;5.2645;5.1103;4.9879;4.8336;4.8136;4.6095 +;-;-;-;-;-;-;-;-;- + 491 + 1 1.499 52758.4 0.4199999868869781 3325 5609 8933 SUDHL4_400M_050219_2,8936 SUDHL4_400M_050219_2,8936,VLFENTDSVHL True True VLFENTDSVHL 49.463756 637.324267566204 4016524.75 8933.0 ENSG00000188739|ENST00000408888|RBM34;;ENST00000495224.1_1_1:235295030-235299397:-|nuORF 8.989967505137125 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8937 49.472 444.0 203750.0 25 0 48498.0 + 34186 SLNGLEVHL 9 118 491.2719750567624 980.5293971803248 2 491.2721130251884 MULTI CID FTMS 0 0 0 8933 182975.203125 0.5253833301165395 -2 0.0996055603027343 4 Unmodified _SLNGLEVHL_ ENSG00000100099|ENST00000398145|HPS4;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000485842.5_1_22:26849853-26868905:-|nuORF;ENST00000493455.6_1_22:26840650-26860128:-|nuORF;nc|ENSG00000100099|Q9NQG7-3|HPS4;nc|ENSG00000100099|Q9NQG7-4|HPS4 39.957323273325 0.0756908302845263 6 {[TV]|[{I|L}S]}NG{I|L}EVH{I|L} 9 0 + 73.906 0.0 0.0 7.5374 7.5374 94.291 0.0 0.0 0.0 43.69833987874749 9.87765543582988 9.87765543582988 13.015384402724592 0 0.4247425010840047 2.0 0.4247425010840047 0.3807196863200844 + + {[TV]|[{I|L}S]}NG{I|L}EVH{I|L};{[TV]|[{I|L}S]}GGG{I|L}EVH{I|L};{[TV]|[{I|L}S]}NG{I|L}E[H{I|L}]V;{[TV]|[{I|L}S]}GGG{I|L}E[H{I|L}]V;{[TV]|[{I|L}S]}[PG]{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}VH{I|L};{[TV]|[{I|L}S]}[RK]HHG{M(Oxidation (M))|F};{[VA]|[{I|L}G]}N[WR]H[KA];{[VA]|[{I|L}G]}GG[WR]H[KA];[NG]{I|L}[WR]H[KA] 7.5374;6.21;5.5632;4.2358;3.5866;1.3624;0.74923;0.54804;0.13875 +;-;-;-;-;-;-;-;- + 512 + 1 1.499 70267.5 1.0 3326 5609 8933 SUDHL4_400M_050219_2,8937 SUDHL4_400M_050219_2,8937,SLNGLEVHL True True SLNGLEVHL 49.471652 491.272113025188 1753438.25 8933.0 ENST00000493455.6_1_22:26840650-26860128:-|nuORF;;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;;nc|ENSG00000100099|Q9NQG7-4|HPS4;;nc|ENSG00000100099|Q9NQG7-3|HPS4;;ENST00000485842.5_1_22:26849853-26868905:-|nuORF;;ENSG00000100099|ENST00000398145|HPS4 6.97734530766805 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8939 49.484 580.0 119950.0 25 0 14119.0 + 1802 ALSQDIPEI 9 109 493.26332503067846 984.5120971281568 2 493.2638427615166 MULTI CID FTMS 0 0 0 8938 87730.5 0.3717333031078409 3 -0.1139793395996093 1 Unmodified _ALSQDIPEI_ ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4 32.30548876998284 0.1201446275138228 6 EPE{I|L} 4 6 26.168 0.0 0.0 2.658 0.0 0.0 498.26879376077255 0.0 498.26879376077255 0.0 2.21578689941029 0.0 0.0 0 0.4247425010840047 0.0 0.7742275032520141 0.0 EPE{I|L} 2.658 - 277 + 1 1.499 59998.1 1.0 3327 5610 8938 SUDHL4_400M_050219_2,8939 SUDHL4_400M_050219_2,8939,ALSQDIPEI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8940 49.497 712.0 120260.0 25 0 21056.0 + 34179 SLNDQGYLL 9 123 511.7619228966547 1021.5092928601094 2 511.7621948122978 MULTI CID FTMS 0 0 0 8938 122310.4609375 1.0 0 0.0 2 Unmodified _SLNDQGYLL_ ENSG00000125885|ENST00000610722|MCM8;nc|ENSG00000125885|Q9UJA3-2|MCM8;nc|ENSG00000125885|Q9UJA3-3|MCM8;nc|ENSG00000125885|Q9UJA3-4|MCM8 30.63653989081413 0.1413794767160703 6 [WH]{M(Oxidation (M))|F}Y[SG]{I|L}{I|L} 8 6 + 30.728 0.0 0.0 3.0081 3.0081 69.646 0.0 0.0 0.0 0.7795501485934828 12.385358076956525 0.7795501485934828 0.7795501485934828 0 0.2887254899964357 0.0 0.9247425010840048 0.0 [WH]{M(Oxidation (M))|F}Y[SG]{I|L}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NEY[SG]{I|L}{I|L};[WH]{M(Oxidation (M))|F}Y{[VA]|[{I|L}G]}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NEY{[VA]|[{I|L}G]}S{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}GGEY[SG]{I|L}{I|L};[WH]{M(Oxidation (M))|F}Y{[VA]|[{I|L}G]}TV;[WH]{M(Oxidation (M))|F}Y{[SA]|[TG]}V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}NEY{[VA]|[{I|L}G]}TV;{[QV]|[N{I|L}]|[RA]|[KV]}NEY{[SA]|[TG]}V{I|L};[{I|L}V]{[SA]|[TG]}[Y{M(Oxidation (M))|F}][WH] 3.0081;2.9318;2.5574;2.4811;2.0304;1.7957;1.7683;1.7194;1.692;1.5804 -;-;-;-;-;-;-;-;-;- 413 + 1 1.499 69188.5 1.0 3328 5610 8938 SUDHL4_400M_050219_2,8940 SUDHL4_400M_050219_2,8940,SLNDQGYLL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8941 49.511 800.0 114190.0 25 0 19320.0 + 14958 ILNERVELL 9 107 549.8298214145402 0 549.8300659060478 PEAK CID FTMS 0 0 0 8938 93828.984375 0.952757692614942 -1 0.0323638916015625 3 Unmodified _ILNERVELL_ ENSG00000131018|ENST00000367255|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;nc|ENSG00000131018|Q8NF91-11|SYNE1;nc|ENSG00000131018|Q8NF91-2|SYNE1;nc|ENSG00000131018|Q8NF91-4|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1 33.4449034751529 0.0939430949041602 6 {I|L}NE 3 6 22.479 0.0 0.0 2.048 0.0 0.0 113.08553107140727 625.3660982721311 738.4516293435385 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.8494850021680094 0.0 + {I|L}NE 2.048 + + 320 + 1 1.499 72496.7 0.4600000083446502 3329 5610 8938 SUDHL4_400M_050219_2,8941 SUDHL4_400M_050219_2,8941,ILNERVELL True True ILNERVELL 49.510558 549.830065906048 484759.90625 8938.0 nc|ENSG00000131018|Q8NF91-2|SYNE1;;ENST00000367256.9_1_6:152443573-152639413:-|nuORF;;nc|ENSG00000131018|Q8NF91-4|SYNE1;;nc|ENSG00000131018|Q8NF91-11|SYNE1;;ENSG00000131018|ENST00000367255|SYNE1;;nc|ENSG00000131018|Q8NF91-8|SYNE1 3.5151975949605307 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8943 49.522 449.0 123440.0 25 0 37487.0 14408 IFIFRHALHLS 11 78 677.3953176337411 1352.776082334282 2 677.3958618044853 MULTI CID FTMS 0 0 0 8942 224143.625 0.4167853135479417 7 -0.35345458984375 1 Unmodified _IFIFRHALHLS_ ENST00000544944.6_1_19:45542792-45543053:+|nuORF 1.3295316138638542 0.8688751186870782 6 K 1 11 0.71334 0.0 0.0 0.052731 0.0 0.0 982.5586578731478 239.0926912897094 1221.6513491628573 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.052731 - 8 + 1 1.499 57254.6 1.0 3330 5611 8942 SUDHL4_400M_050219_2,8943 SUDHL4_400M_050219_2,8943,IFIFRHALHLS False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8944 49.525 141.0 328290.0 25 0 23583.0 + -1 FVDPAQITM 9 83 519.2526841740524 0 519.2526122927666 PEAK CID FTMS 0 0 0 8942 238761.8125 0.8277602760162259 -2 0.0712814331054687 2 Oxidation (M) _FVDPAQITM(Oxidation (M))_ ENSG00000167325|ENST00000300738|RRM1 30.63653989081413 0.1077493867305487 6 {I|L}T 2 -1 14.442 0.0 0.0 1.3933 0.0 0.0 657.3122398307236 162.02327905826408 819.3355188889876 0.0 0.0 0.0 0.0 0 0.5 0.0 0.7134679910804405 0.0 {I|L}T 1.3933 + + 28 + 1 1.499 39763.6 1.0 3331 5611 8942 SUDHL4_400M_050219_2,8944 SUDHL4_400M_050219_2,8944,FVDPAQITM False False FVDPAQITM 49.525314 519.252612292767 8941126.0 8942.0 ENSG00000167325|ENST00000300738|RRM1 6.537563641866048 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8945 49.538 762.0 115070.0 25 0 15792.0 + 10904 GAHLDLSAF 9 118 465.7378821651437 929.4612113970876 2 465.7374145388603 MULTI CID FTMS 0 0 0 8942 130140.1015625 0.9056653187288188 -2 0.0712814331054687 3 Unmodified _GAHLDLSAF_ ENSG00000183431|ENST00000373019|SF3A3;ENST00000446317.1_1_20:3470835-3470958:-|nuORF;ENST00000470585.5_1_1:38445118-38455637:-|nuORF 38.15118350030904 0.0856056900103839 6 {NN|[MP]|[D{I|L}]|[EV]}HQ{I|L}SA{M(Oxidation (M))|F} 8 4 + 47.37 0.0 0.0 5.0965 5.0965 76.801 0.0 0.0 0.0 1.5490195998574308 9.419628234359578 1.5490195998574308 1.5490195998574308 0 0.8182503180159344 1.3010299956639813 0.8252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}HQ{I|L}SA{M(Oxidation (M))|F};[HQ]{I|L}D{I|L}SA{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}HQS{I|L}A{M(Oxidation (M))|F};[HQ]{I|L}DS{I|L}A{M(Oxidation (M))|F};[HQ]{I|L}SD{I|L}A{M(Oxidation (M))|F};[H{I|L}]QD{I|L}SA{M(Oxidation (M))|F};[HQ]{I|L}S{I|L}DA{M(Oxidation (M))|F};{NN|[MP]|[D{I|L}]|[EV]}H[AG]{I|L}SA{M(Oxidation (M))|F};[H{I|L}]QDS{I|L}A{M(Oxidation (M))|F};[H{I|L}]DQ{I|L}SA{M(Oxidation (M))|F} 5.0965;4.9298;4.9057;4.739;4.4809;4.282;4.1583;4.0999;4.0913;3.9582 -;-;-;-;-;-;-;-;-;- 594 1 1.499 71533.8 1.0 3332 5611 8942 SUDHL4_400M_050219_2,8945 SUDHL4_400M_050219_2,8945,GAHLDLSAF True True GAHLDLSAF 49.538489 465.73741453886 671646.8125 8942.0 ENST00000446317.1_1_20:3470835-3470958:-|nuORF;;ENST00000470585.5_1_1:38445118-38455637:-|nuORF;;ENSG00000183431|ENST00000373019|SF3A3 6.238916397094727 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8947 49.555 800.0 92900.0 25 0 9317.0 + + 19718 GLVNYQISV 9 119 496.7760551485487 991.5375573638972 2 496.7747375369072 MULTI CID FTMS 0 0 0 8946 64184.07421875 0.6458872256562364 1 -0.0471534729003906 1 Unmodified _LGNQYVVTV_ ENST00000475316.5_1_7:65439511-65446985:-|nuORF;ENSG00000169919|ENST00000304895|GUSB;nc|ENSG00000169919|P08236-2|GUSB 24.67388899826682 0.2172451872415813 6 {I|L}{I|L}[HD]P{I|L}{[RE]|[WV]} 8 -1 + 21.604 0.0 0.0 2.1788 2.1788 74.789 0.0 0.0 0.0 4.368128451160512 3.9794000867203714 3.9794000867203714 6.409780573583319 0 0.0 1.3979400086720375 0.0 0.0 {I|L}{I|L}[HD]P{I|L}{[RE]|[WV]};{I|L}{I|L}[WY]{I|L}{[RE]|[WV]};[R{M(Oxidation (M))|F}]{I|L}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TV;[HV]{I|L}EP{I|L}{[RE]|[WV]};[R{M(Oxidation (M))|F}]{I|L}P{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S{I|L};[R{M(Oxidation (M))|F}]{I|L}[RK]C(Carbamidomethyl (C)){I|L};[R{M(Oxidation (M))|F}]{I|L}P[{M(Oxidation (M))|F}V]T{I|L};[R{M(Oxidation (M))|F}]{I|L}P[YT]PV;[YQ][RK]{I|L}{[RE]|[WV]} 2.1788;1.5324;1.4701;1.3825;0.98887;0.92519;0.75262;0.60925;0.42611 -;-;-;-;-;-;-;-;- 333 1 1.499 59395.2 0.4399999976158142 3333 5612 8946 SUDHL4_400M_050219_2,8947 SUDHL4_400M_050219_2,8947,LGNQYVVTV False False GLVNYQISV 49.554845 496.774737536907 424633.0625 8946.0 ENST00000475316.5_1_7:65439511-65446985:-|nuORF;;ENSG00000169919|ENST00000304895|GUSB;;nc|ENSG00000169919|P08236-2|GUSB -0.4641924357662598 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8948 49.558 188.0 354050.0 25 0 38054.0 + 9601 FLLDGLRSL 9 89 517.3053340831916 0 517.3054687380791 PEAK CID FTMS 0 0 0 8946 288290.40625 0.8872534343311451 -1 0.0279083251953125 2 Unmodified _FLLDGLRSL_ REV__ENSG00000135423|ENST00000311966|GLS2;REV__ENST00000471282.5_1_12:56873562-56882067:-|nuORF;REV__ENST00000491880.1_1_12:56873562-56881376:-|nuORF;REV__ENST00000494345.5_1_12:56869710-56882067:-|nuORF;REV__nc|ENSG00000135423|Q9UI32-2|GLS2 22.736283301280096 0.1762661025464585 6 {I|L}VH 3 -1 20.445 0.0 0.0 1.98 0.0 0.0 147.06451230525187 533.2918184869749 680.3563307922268 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}VH 1.98 - 141 + 1 1.499 52067.0 1.0 3334 5612 8946 SUDHL4_400M_050219_2,8948 SUDHL4_400M_050219_2,8948,FLLDGLRSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8949 49.572 800.0 140140.0 25 0 30896.0 + 17782 KQIFETIYY 9 111 602.8157942097158 1203.6170354862315 2 602.8162719607353 MULTI CID FTMS 0 0 0 8946 152126.609375 0.5273893420378377 -2 0.0668258666992187 3 Unmodified _KQIFETIYY_ ENSG00000167325|ENST00000300738|RRM1 71.92227651296345 0.0203558744033348 6 [KQ]{I|L}{M(Oxidation (M))|F}ET{I|L}YY 9 0 + 78.88 0.0 0.0 6.5536 6.5536 86.286 0.0 0.0 0.0 5.969100130080562 16.478174818886373 5.969100130080562 5.969100130080562 0 0.9247425010840048 0.0 1.274227503252014 1.1307196863200843 + + [KQ]{I|L}{M(Oxidation (M))|F}ET{I|L}YY;[Q{I|L}]K{M(Oxidation (M))|F}ET{I|L}YY;[KQ]{I|L}{M(Oxidation (M))|F}ETY{I|L}Y;[Q{I|L}]{M(Oxidation (M))|F}KET{I|L}YY;[KQ]{I|L}T[{M(Oxidation (M))|F}E]{I|L}YY;[{I|L}T]E{M(Oxidation (M))|F}QK{I|L}YY;[Q{I|L}]K{M(Oxidation (M))|F}ETY{I|L}Y;[Y{I|L}][DV]QK{I|L}YY;[Q{I|L}]KT[{M(Oxidation (M))|F}E]{I|L}YY;[{M(Oxidation (M))|F}E]T{I|L}QK{I|L}YY 6.5536;6.0577;5.5352;5.3498;5.2861;5.1469;5.0393;4.8224;4.7902;4.7441 +;-;-;-;-;-;-;-;-;- + 770 1 1.499 85151.3 0.5799999833106995 3335 5612 8946 SUDHL4_400M_050219_2,8949 SUDHL4_400M_050219_2,8949,KQIFETIYY True True KQIFETIYY 49.572322 602.816271960735 1757197.875 8946.0 ENSG00000167325|ENST00000300738|RRM1 7.028365770975749 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8950 49.586 769.0 137580.0 25 0 11828.0 + 2349 AQLILKAI 8 125 435.2949441173981 868.5753353015963 2 435.2953674197197 MULTI CID FTMS 0 0 0 8946 112278.0859375 0.6194151611348012 -1 0.0279083251953125 4 Unmodified _AQLILKAI_ ENSG00000113648|ENST00000511689|MACROH2A1;ENST00000511494.5_1_5:134670668-134681802:-|nuORF;ENST00000512507.5_1_5:134670668-134688768:-|nuORF;nc|ENSG00000113648|O75367-3|MACROH2A1;nc|ENSG00000113648|O75367|MACROH2A1 28.486842064014134 0.4448922141344407 6 [QA]{I|L}{I|L}{I|L}KA{I|L} 8 0 [QA] + + 32.332 16.923 8.5002 3.7224 3.7224 53.306 0.0 0.0 0.0 0.0 9.63660567114374 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + + [QA]{I|L}{I|L}{I|L}KA{I|L} 3.7224 + + 128 + 1 1.499 83302.1 1.0 3336 5612 8946 SUDHL4_400M_050219_2,8950 SUDHL4_400M_050219_2,8950,AQLILKAI False True AQLILKAI 49.585624 435.29536741972 788453.1875 8946.0 ENST00000512507.5_1_5:134670668-134688768:-|nuORF;;ENST00000511494.5_1_5:134670668-134681802:-|nuORF;;nc|ENSG00000113648|O75367-3|MACROH2A1;;ENSG00000113648|ENST00000511689|MACROH2A1;;nc|ENSG00000113648|O75367|MACROH2A1 1.3205575346946716 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8952 49.603 800.0 78401.0 25 0 9151.2 + 29429 QLFIRSVALC 10 96 575.3241014157503 1148.6336498983003 2 575.3240234255791 MULTI CID FTMS 0 0 0 8951 38346.76953125 0.0739764711251333 6 -0.3241653442382812 1 Unmodified _QLFIRSVALC_ REV__ENSG00000169777|ENST00000382492|TAS2R1 13.042465956692816 0.6287021003332052 6 [Q{I|L}]Y 3 -1 27.932 0.0 0.0 2.4317 0.0 0.0 0.0 741.4008883111936 741.4008883111936 11.689615513722202 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.0 0.0 [Q{I|L}]Y 2.4317 - 41 + 1 1.499 52498.5 0.4300000071525574 3337 5613 8951 SUDHL4_400M_050219_2,8952 SUDHL4_400M_050219_2,8952,QLFIRSVALC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8953 49.605 18.0 2608400.0 25 0 144020.0 + 29396 QLDDLKVEL 9 87 536.7978215793179 1071.5810902254357 2 536.7979614138603 MULTI CID FTMS 0 0 0 8951 1488828.0 0.3131419336234876 -1 0.0471534729003906 2 Unmodified _QLDDLKVEL_ ENSG00000136942|ENST00000348462|RPL35;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF 43.85829265575387 0.0542763391141878 6 E{I|L} 2 7 16.682 0.0 0.0 1.5568 0.0 0.0 811.4439269947701 0.0 811.4439269947701 0.0 3.504726619787867 0.0 0.0 0 0.0 0.0 0.5 0.0 + E{I|L} 1.5568 + + 278 + 1 1.499 42041.4 1.0 3338 5613 8951 SUDHL4_400M_050219_2,8953 SUDHL4_400M_050219_2,8953,QLDDLKVEL True True QLDDLKVEL 49.60452 536.79796141386 23283106.0 8951.0 ENST00000487431.1_1_9:127620199-127623861:-|nuORF;;ENSG00000136942|ENST00000348462|RPL35;;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;;ENST00000495728.1_1_9:127623696-127624209:-|nuORF;;ENST00000450819.1_1_1:237144684-237145005:+|nuORF 4.005952676137288 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8954 49.606 45.0 1354800.0 25 0 73954.0 -1 0 67 881.9045090502834 1761.7944651673668 2 881.9056274294853 MULTI CID FTMS 0 0 0 8951 1294263.625 0.4480045057857914 -1 0.0471534729003906 3 6 [QA]HDEAQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 15 -1 + 85.602 0.0 0.0 4.8588 4.8588 74.283 0.0 0.0 0.0 0.4419057113367586 1.3694462437057382 0.4419057113367586 0.4419057113367586 0 0.75 0.0 0.3807196863200844 0.7742275032520141 [QA]HDEAQQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQW{M(Oxidation (M))|F}YQ[{I|L}V];[HQ]ADEAQQDA{M(Oxidation (M))|F}YQ[{I|L}V];[QA]DHEAQQDA{M(Oxidation (M))|F}YQ[{I|L}V];[QA]HDEAQQDA{M(Oxidation (M))|F}Y[AG][{I|L}V];[QA]HDEAQ[AG]DA{M(Oxidation (M))|F}YQ[{I|L}V];[QA]HDEA[AG]QDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQW{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]W{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QW{M(Oxidation (M))|F}YQ[{I|L}V] 4.8588;4.8337;4.6879;4.6589;4.3462;4.3462;4.3462;4.32;4.32;4.32 -;-;-;-;-;-;-;-;-;- 2768 1 1.499 49606.8 1.0 3339 5613 8951 SUDHL4_400M_050219_2,8954 SUDHL4_400M_050219_2,8954, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8955 49.609 192.0 361710.0 25 0 68583.0 + 34073 SLLESVQKL 9 87 508.8031914280384 1015.5918299228769 2 508.8032409548759 MULTI CID FTMS 0 0 0 8951 327514.75 0.4705210723338796 -1 0.0471534729003906 4 Unmodified _SLLESVQKL_ ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR 45.69961567697781 0.0497987121815769 6 {[TV]|[{I|L}S]}{I|L}ESVQK{I|L} 9 0 + 81.565 0.0 0.0 8.0313 8.0313 92.966 0.0 0.0 0.0 34.20432836127297 11.962724883926654 11.962724883926654 9.208187539523747 0 0.9247425010840048 2.0 0.4247425010840047 0.4247425010840047 + + {[TV]|[{I|L}S]}{I|L}ESVQK{I|L};{[TV]|[{I|L}S]}{I|L}ESV[AG]K{I|L} 8.0313;7.1246 +;- + 506 + 1 1.499 55999.8 1.0 3340 5613 8951 SUDHL4_400M_050219_2,8955 SUDHL4_400M_050219_2,8955,SLLESVQKL True True SLLESVQKL 49.609474 508.803240954876 7067205.0 8951.0 nc|ENSG00000175054|Q13535-3|ATR;;nc|ENSG00000175054|Q13535-2|ATR;;ENSG00000175054|ENST00000350721|ATR 5.989279429117839 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8956 49.618 494.0 202960.0 25 0 18611.0 + -1 KMDEVLYSI 9 100 557.2779498379618 1112.5413467427236 2 557.2778198122978 MULTI CID FTMS 0 0 0 8951 144780.921875 0.6171559622456348 -1 0.0471534729003906 5 Oxidation (M) _KM(Oxidation (M))DEVLYSI_ ENSG00000141759|ENST00000269601|TXNL4A 34.93206674587334 0.1032771302489716 6 {M(Oxidation (M))|F}K{I|L}YS{I|L} 6 -1 41.075 0.0 0.0 3.692 0.0 0.0 343.1379566876969 0.0 343.1379566876969 0.0 17.602131414518922 0.0 0.0 0 1.1989700043360187 0.0 0.0 0.3054621874040891 {M(Oxidation (M))|F}K{I|L}YS{I|L} 3.692 - 846 1 1.499 77189.1 1.0 3341 5613 8951 SUDHL4_400M_050219_2,8956 SUDHL4_400M_050219_2,8956,KMDEVLYSI False False KMDEVLYSI 49.618212 557.277819812298 1240688.625 8951.0 ENSG00000141759|ENST00000269601|TXNL4A 4.490677674611409 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8957 49.625 401.0 148490.0 25 0 15649.0 + 13466 HLSNILSEV 9 92 506.2771678018286 1010.5397826704572 2 506.2774230837822 MULTI CID FTMS 0 0 0 8951 126322.2734375 0.7987680617876951 -1 0.0471534729003906 6 Unmodified _HLSNILSEV_ ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 81.89019881105858 0.0170587746866453 6 [H{I|L}]SN{I|L}{I|L}SEV 9 0 + 66.542 0.0 0.0 6.5848 6.5848 91.881 0.0 0.0 0.0 15.96664959441256 51.05758396308096 15.96664959441256 11.95046257204389 0 0.8539171939081174 1.154901959985743 1.5629529932484498 0.2742275032520141 + + [H{I|L}]SN{I|L}{I|L}SEV;[H{I|L}]SGG{I|L}{I|L}SEV;[NS][H{I|L}]{I|L}{I|L}SEV;[W{M(Oxidation (M))|F}]{I|L}{I|L}N[YR];[H{I|L}]S[KA]{I|L}DEV;{NN|[MP]|[D{I|L}]|[EV]}[VP][RP]SEV;[W{M(Oxidation (M))|F}]{I|L}{I|L}GG[YR];[{M(Oxidation (M))|F}V]DRR[YR] 6.5848;5.4022;3.9576;2.9217;2.3829;2.0196;1.9984;0.63764 +;-;-;-;-;-;-;- + 175 1 1.499 51113.5 1.0 3342 5613 8951 SUDHL4_400M_050219_2,8957 SUDHL4_400M_050219_2,8957,HLSNILSEV True True HLSNILSEV 49.62537 506.277423083782 904502.9375 8951.0 ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 6.344875653584798 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8958 49.63 268.0 229960.0 25 0 26961.0 + 9486 FLDGHDLQL 9 84 529.2692506131638 1056.5239482931274 2 529.2691528201103 MULTI CID FTMS 0 0 0 8951 126000.484375 0.486148586427741 -1 0.0471534729003906 7 Unmodified _FLDGHDLQL_ ENSG00000196588|ENST00000355630|MRTFA;nc|ENSG00000196588|Q969V6|MRTFA 34.10243960390752 0.1078313939113124 6 [HD]GD{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L} 9 5 + 37.189 0.0 0.0 3.52 3.52 75.927 0.0 0.0 0.0 2.632192780232792 12.007499097191292 2.632192780232792 4.771212547196626 0 0.2742275032520141 0.0 0.7614393726401688 0.0 [HD]GD{I|L}{M(Oxidation (M))|F}{I|L}Q{I|L};[HD]GD{I|L}{I|L}{M(Oxidation (M))|F}Q{I|L};[HD]G{I|L}D{M(Oxidation (M))|F}{I|L}Q{I|L};[HD]G{I|L}D{I|L}{M(Oxidation (M))|F}Q{I|L};[HD]GD{I|L}Q{I|L}{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}DQ{M(Oxidation (M))|F}Q{I|L};[HD]GD{I|L}{I|L}Q{M(Oxidation (M))|F}{I|L};[HD]G{I|L}DQ{I|L}{M(Oxidation (M))|F}{I|L};[HD]G{I|L}{M(Oxidation (M))|F}D{I|L}Q{I|L};[HD]G{I|L}D{I|L}Q{M(Oxidation (M))|F}{I|L} 3.52;3.0684;2.9501;2.4985;2.4769;2.3381;2.3102;1.907;1.9028;1.7404 -;-;-;-;-;-;-;-;-;- 609 1 1.499 51229.3 1.0 3343 5613 8951 SUDHL4_400M_050219_2,8958 SUDHL4_400M_050219_2,8958,FLDGHDLQL True True FLDGHDLQL 49.630328 529.26915282011 1218148.375 8951.0 ENSG00000196588|ENST00000355630|MRTFA;;nc|ENSG00000196588|Q969V6|MRTFA 1.4281311829884846 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8959 49.643 735.0 133480.0 25 0 17681.0 + 12695 GVLPNIQAV 9 119 455.7717536413603 909.5289543495206 2 455.7715637087822 MULTI CID FTMS 0 0 0 8951 124078.5546875 0.1020287513738693 -5 0.1954765319824218 8 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 44.40701690623563 0.0526327925666318 6 [NP]{I|L}GAA{I|L} 7 6 39.963 0.0 0.0 4.3938 0.0 0.0 0.0 270.14745955875816 270.14745955875816 14.139036186588548 0.0 0.0 0.0 0 0.0 0.7695510786217261 0.0 0.3807196863200844 [NP]{I|L}GAA{I|L} 4.3938 - 781 1 1.499 78631.0 1.0 3344 5613 8951 SUDHL4_400M_050219_2,8959 SUDHL4_400M_050219_2,8959,GVLPNIQAV True True GVLPNIQAV 49.643053 455.771563708782 19197512.0 8951.0 ENSG00000196747|ENST00000358739|H2AC13;;ENSG00000188486|ENST00000530167|H2AX;;ENSG00000184260|ENST00000331380|H2AC20;;ENSG00000164508|ENST00000297012|H2AC1;;ENSG00000278677|ENST00000359611|H2AC17;;ENSG00000276368|ENST00000333151|H2AC14;;ENSG00000181218|ENST00000689584|H2AC25;;ENSG00000196866|ENST00000341023|H2AC7;;ENSG00000277075|ENST00000303910|H2AC8;;ENSG00000196787|ENST00000359193|H2AC11;;ENSG00000276903|ENST00000613174|H2AC16;;nc|ENSG00000288859|Q6FI13|H2AC18;;ENSG00000278463|ENST00000615868|H2AC4;;ENSG00000274997|ENST00000377459|H2AC12;;ENSG00000184270|ENST00000331128|H2AC21;;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;;ENSG00000180573|ENST00000377791|H2AC6;;nc|ENSG00000246705|Q9BTM1-2|H2AJ;;ENSG00000246705|ENST00000544848|H2AJ 5.604227701822917 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8960 49.65 384.0 199940.0 25 0 21821.0 + -1 KLMSELESF 9 116 550.2712324196128 1098.5279119060256 2 550.2704345583916 MULTI CID FTMS 0 0 0 8951 124222.3671875 0.6520093358457242 -1 0.0471534729003906 9 Oxidation (M) _KLM(Oxidation (M))SELESF_ nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1-4|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;ENST00000435616.5_1_2:174224078-174228757:+|nuORF;ENST00000496441.5_1_2:174219691-174228743:+|nuORF;nc|ENSG00000144354|Q9BWT1|CDCA7;nc|ENSG00000144354|Q9BWT1-5|CDCA7;ENSG00000144354|ENST00000306721|CDCA7 34.93206674587334 0.1032771302489716 6 {[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}K{I|L}ES{M(Oxidation (M))|F} 9 -1 + 74.458 0.0 0.0 6.778 6.778 81.589 0.0 0.0 0.0 1.249387366082999 16.478174818886366 1.249387366082999 1.249387366082999 0 1.2396518287104437 0.8239087409443188 0.6989700043360187 0.0 {[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}K{I|L}ES{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}K{I|L}ES{M(Oxidation (M))|F};[{M(Oxidation (M))|F}E]S{I|L}K{I|L}ES{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{M(Oxidation (M))|F}{I|L}K{I|L}ES{M(Oxidation (M))|F};{[ES]|[DT]|[{I|L}C]}{I|L}{M(Oxidation (M))|F}K{I|L}ES{M(Oxidation (M))|F};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}KSE{I|L}ES{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}K{I|L}TD{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}K{I|L}TD{M(Oxidation (M))|F};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[K{I|L}]E{I|L}ES{M(Oxidation (M))|F};[{I|L}T]D{M(Oxidation (M))|F}K{I|L}ES{M(Oxidation (M))|F} 6.778;6.6643;5.7539;5.7271;5.5668;5.5143;5.4566;5.3429;5.2314;5.2314 -;-;-;-;-;-;-;-;-;- 521 1 1.499 62768.0 1.0 3345 5613 8951 SUDHL4_400M_050219_2,8960 SUDHL4_400M_050219_2,8960,KLMSELESF False False KLMSELESF 49.649949 550.270434558392 979849.875 8951.0 nc|ENSG00000144354|Q9BWT1-3|CDCA7;;nc|ENSG00000144354|Q9BWT1-4|CDCA7;;nc|ENSG00000144354|Q9BWT1-6|CDCA7;;ENST00000435616.5_1_2:174224078-174228757:+|nuORF;;ENST00000496441.5_1_2:174219691-174228743:+|nuORF;;nc|ENSG00000144354|Q9BWT1|CDCA7;;nc|ENSG00000144354|Q9BWT1-5|CDCA7;;ENSG00000144354|ENST00000306721|CDCA7 2.8044866720835366 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8961 49.661 535.0 97326.0 25 0 7294.0 34296 SLREENRRLRL 11 95 481.284445291102 1440.831506473506 3 481.2866699099541 MULTI CID FTMS 0 0 0 8951 103256.7109375 1.0 0 0.0 10 Unmodified _SLREENRRLRL_ ENSG00000163808|ENST00000326047|KIF15;ENST00000493134.1_1_3:44840780-44854740:+|nuORF;nc|ENSG00000163808|Q9NS87-2|KIF15;nc|ENSG00000163808|Q9NS87-4|KIF15 3.2813086475875832 0.8596665074481906 6 {I|L} 1 10 13.495 0.0 0.0 0.9366 0.0 0.0 1309.7366558649103 0.0 1309.7366558649103 0.0 0.3959062302381255 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.9366 + + 57 + 1 1.499 46980.0 1.0 3346 5613 8951 SUDHL4_400M_050219_2,8961 SUDHL4_400M_050219_2,8961,SLREENRRLRL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8962 49.674 800.0 62520.0 25 0 5942.9 + + 39363 GLGPTFKL 8 107 416.749778432284 831.485003931368 2 416.7499267458916 MULTI CID FTMS 0 0 0 8951 90856.0 1.0 0 0.0 11 Unmodified _VAGPTFKL_ nc|ENSG00000174483|Q8NFJ9-2|BBS1;nc|ENSG00000174483|Q8NFJ9-3|BBS1;ENSG00000174483|ENST00000318312|BBS1;ENST00000529955.5_1_11:66281964-66299243:+|nuORF 21.74664581756881 0.5868176546531598 6 {[VA]|[{I|L}G]}GPT{M(Oxidation (M))|F}K{I|L} 8 -1 + 34.698 0.0 0.0 4.1731 4.1731 86.678 0.0 0.0 0.0 23.10467280022448 7.621348003018198 7.621348003018198 34.69846661334654 0 0.5994850021680094 2.0 0.0 0.0 {[VA]|[{I|L}G]}GPT{M(Oxidation (M))|F}K{I|L} 4.1731 + + 52 + 1 1.499 43457.7 0.3700000047683716 3347 5613 8951 SUDHL4_400M_050219_2,8962 SUDHL4_400M_050219_2,8962,VAGPTFKL False False GLGPTFKL 49.674338 416.749926745892 446320.90625 8951.0 nc|ENSG00000174483|Q8NFJ9-2|BBS1;;nc|ENSG00000174483|Q8NFJ9-3|BBS1;;ENSG00000174483|ENST00000318312|BBS1;;ENST00000529955.5_1_11:66281964-66299243:+|nuORF 1.163630525271098 2.0 False 8.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8964 49.686 445.0 145570.0 25 0 29372.0 + 15012 ILSKYVKKGG 10 75 546.8404984021557 1091.6664438711114 2 546.8406249880791 MULTI CID FTMS 0 0 0 8963 166079.5625 0.3069292704092481 3 -0.1524124145507812 1 Unmodified _ILSKYVKKGG_ REV__ENSG00000134982|ENST00000257430|APC;REV__nc|ENSG00000134982|P25054-2|APC;REV__nc|ENSG00000134982|P25054-3|APC 1.6526216038709556 0.7189921496796233 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 6 1 1.499 55839.2 1.0 3348 5614 8963 SUDHL4_400M_050219_2,8964 SUDHL4_400M_050219_2,8964,ILSKYVKKGG False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8965 49.69 177.0 270910.0 25 0 15394.0 + -1 KIIGIMEEV 9 81 524.2907538640798 1046.5669547949594 2 524.2911865115166 MULTI CID FTMS 0 0 0 8963 330481.125 1.0 0 0.0 2 Oxidation (M) _KIIGIM(Oxidation (M))EEV_ chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-4|MSH6;nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6 36.12702656103203 0.0967173616627612 6 [K{I|L}]{I|L}G{I|L}{M(Oxidation (M))|F}EEV 9 -1 + 44.301 0.0 0.0 4.233 4.233 77.403 0.0 0.0 0.0 13.123468415207498 27.31099050921649 13.123468415207498 3.935078169319297 0 0.718765315847925 1.0 0.0 0.0 [K{I|L}]{I|L}G{I|L}{M(Oxidation (M))|F}EEV;[K{I|L}]{I|L}G{I|L}{M(Oxidation (M))|F}{[HG]|PP}Y;[K{I|L}]{I|L}[RP]EEY;[K{I|L}]{I|L}G[VP]EEY;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L}[K{I|L}]EEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L}[K{I|L}]{[HG]|PP}Y;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}G{I|L}E[K{I|L}]EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GE{I|L}[K{I|L}]EV;[{M(Oxidation (M))|F}E]{[VA]|[{I|L}G]}{I|L}[K{I|L}]EV 4.233;3.857;1.8791;1.7545;1.2676;0.89163;0.69236;0.57298;0.21953 +;-;-;-;-;-;-;-;- + 161 1 1.499 43127.5 1.0 3349 5614 8963 SUDHL4_400M_050219_2,8965 SUDHL4_400M_050219_2,8965,KIIGIMEEV False False KIIGIMEEV 49.689578 524.291186511517 1811714.25 8963.0 chr2:47696097-47708183|41|51.15|0.3|7.43|+|ENST00000652107|MSH6,MSH6;;chr2:47708430-47737391|41|22.44|0.26|6.46|+|ENST00000652107|MSH6,MSH6;;ENSG00000116062|ENST00000234420|MSH6;;nc|ENSG00000116062|P52701-4|MSH6;;nc|ENSG00000116062|P52701-2|MSH6;;nc|ENSG00000116062|P52701-3|MSH6 5.928723335266113 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8966 49.698 505.0 242110.0 25 0 28760.0 + 40783 VLLGKVYVV 9 110 495.3232482985754 988.6319436639508 2 495.3234435915947 MULTI CID FTMS 0 0 0 8963 263277.75 0.9451827126981068 -1 0.0887031555175781 3 Unmodified _VLLGKVYVV_ ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24 54.773552608820026 0.0299037012502309 6 V{I|L}{I|L}G 4 5 52.907 0.0 0.0 5.3516 0.0 0.0 0.0 603.3537691705686 603.3537691705686 15.255762612236907 0.0 0.0 0.0 0 0.6989700043360187 2.0 0.0 0.0 + V{I|L}{I|L}G 5.3516 + + 1434 + 1 1.499 94607.7 1.0 3350 5614 8963 SUDHL4_400M_050219_2,8966 SUDHL4_400M_050219_2,8966,VLLGKVYVV True True VLLGKVYVV 49.698478 495.323443591595 1555708.625 8963.0 nc|ENSG00000114796|Q6TFL4-2|KLHL24;;ENSG00000114796|ENST00000242810|KLHL24 6.006802399953206 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8967 49.702 193.0 89482.0 25 0 6273.6 + -1 RIMEFTTTL 9 52 563.7853042807603 1125.5560556283206 2 564.2953979372978 MULTI CID FTMS 0 0 0 8963 202520.359375 0.3440552851878491 11 -0.445892333984375 4 2 Carbamidomethyl (C) _SILC(Carbamidomethyl (C))C(Carbamidomethyl (C))LFTL_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 4.75600775471527 0.7486543447549536 6 {I|L} 1 -1 11.783 0.0 0.0 1.0468 0.0 0.0 994.4611134669908 0.0 994.4611134669908 0.0 7.178642847807186 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.0468 + + 6 + 1 1.499 21845.1 1.0 3351 5614 8963 SUDHL4_400M_050219_2,8967 SUDHL4_400M_050219_2,8967,SILCCLFTL False False RIMEFTTTL 49.7022 564.295397937298 830148.6875 8963.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 4.357707420984904 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8968 49.713 615.0 130700.0 25 0 6680.4 + -1 SMLDDLRNV 9 105 539.7624270786363 1077.5103012240725 2 539.7633544802666 MULTI CID FTMS 0 0 0 8963 123376.53125 1.0 0 0.0 5 Oxidation (M) _SM(Oxidation (M))LDDLRNV_ ENST00000521987.1_1_21:46321596-46323430:-|nuORF;ENST00000498666.5_1_21:46314678-46340855:-|nuORF;ENSG00000160255|ENST00000652462|ITGB2 15.248480904072842 0.4239247793462406 6 {I|L}DD{I|L}{[ES]|[DT]|[{I|L}C]} 6 -1 36.911 0.0 0.0 3.4256 0.0 0.0 387.22227675605626 0.0 387.22227675605626 0.0 23.098943791441968 0.0 0.0 0 1.0 0.0 0.0 0.0 {I|L}DD{I|L}{[ES]|[DT]|[{I|L}C]} 3.4256 - 170 1 1.499 64950.0 1.0 3352 5614 8963 SUDHL4_400M_050219_2,8968 SUDHL4_400M_050219_2,8968,SMLDDLRNV False False SMLDDLRNV 49.712942 539.763354480267 631727.5 8963.0 ENST00000521987.1_1_21:46321596-46323430:-|nuORF;;ENST00000498666.5_1_21:46314678-46340855:-|nuORF;;ENSG00000160255|ENST00000652462|ITGB2 2.657891233762105 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8969 49.727 800.0 135160.0 25 0 18146.0 37407 TLAQLLTLLYD 11 98 632.3618857719354 1262.7092186106706 2 632.3616821169853 MULTI CID FTMS 0 0 0 8963 118626.3828125 1.0 0 0.0 6 Unmodified _TLAQLLTLLYD_ ENSG00000115760|ENST00000421745|BIRC6;ENST00000471232.5_1_2:32750532-32815924:+|nuORF 5.296884461304476 0.8501568894076437 6 {I|L} 1 10 9.9148 0.0 0.0 0.7852 0.0 0.0 1131.6144595548096 0.0 1131.6144595548096 0.0 7.440583195105628 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.7852 + + 50 + 1 1.499 87308.7 0.5099999904632568 3353 5614 8963 SUDHL4_400M_050219_2,8969 SUDHL4_400M_050219_2,8969,TLAQLLTLLYD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8970 49.741 800.0 229680.0 25 0 32651.0 + 9680 FLRDTADFQI 10 129 613.3139247899171 1224.613296646634 2 613.3146240115166 MULTI CID FTMS 0 0 0 8963 118302.0546875 0.4950075467202985 -1 0.0887031555175781 7 Unmodified _FLRDTADFQI_ ENST00000530727.5_1_1:198608260-198608399:+|nuORF 51.41523569358685 0.0718446036348414 6 [AG]{M(Oxidation (M))|F}[KQ]TAD{M(Oxidation (M))|F}Q{I|L} 11 5 + 58.974 0.0 0.0 4.8158 4.8158 73.946 0.0 0.0 0.0 0.1957887876779906 16.575773191777934 0.1957887876779906 0.1957887876779906 0 0.6747425010840047 1.5228787452803376 1.0356668758921828 0.0 [AG]{M(Oxidation (M))|F}[KQ]TAD{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}AATAD{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[WK]D{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}AATW{M(Oxidation (M))|F}Q{I|L};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}[KQ]TAD{M(Oxidation (M))|F}Q{I|L};[AG]{M(Oxidation (M))|F}[KQ]TAD{M(Oxidation (M))|F}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}AATAD{M(Oxidation (M))|F}[AG]{I|L};[AG]{M(Oxidation (M))|F}[KQ]TADQ{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}AATADQ{M(Oxidation (M))|F}{I|L};{I|L}{I|L}C(Carbamidomethyl (C))[DG]{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q{I|L} 4.8158;4.7998;4.3972;4.2628;4.0794;4.0703;4.0544;3.8533;3.8373;3.8083 -;-;-;-;-;-;-;-;-;- 1079 1 1.499 138204.7 0.5099999904632568 3354 5614 8963 SUDHL4_400M_050219_2,8970 SUDHL4_400M_050219_2,8970,FLRDTADFQI True True FLRDTADFQI 49.740613 613.314624011517 1544356.375 8963.0 ENST00000530727.5_1_1:198608260-198608399:+|nuORF 6.516251881917317 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8971 49.752 641.0 124630.0 25 0 27408.0 + 30228 QWRQLAIRQKA 11 81 699.4082512844325 1396.8019496356649 2 699.4086181521416 MULTI CID FTMS 0 0 0 8963 105461.7265625 0.3065621709063026 -7 0.3346519470214844 8 Unmodified _QWRQLAIRQKA_ REV__ENSG00000152455|ENST00000354919|SUV39H2;REV__nc|ENSG00000152455|Q9H5I1-2|SUV39H2 1.3295316138638542 0.8688751186870782 6 R 1 -1 10.181 0.0 0.0 0.72888 0.0 0.0 1222.689871854218 0.0 1222.689871854218 0.0 10.181060863272222 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.72888 + + 6 + 1 1.499 70063.4 1.0 3355 5614 8963 SUDHL4_400M_050219_2,8971 SUDHL4_400M_050219_2,8971,QWRQLAIRQKA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8973 49.769 800.0 79486.0 25 0 8094.1 + 40679 VLFENTDSVHL 11 83 637.3244115219236 1272.634270110647 2 637.3249389529228 MULTI CID FTMS 0 0 0 8972 86802.8125 0.24545935669923 2 -0.0749740600585937 1 Unmodified _VLFENTDSVHL_ ENSG00000188739|ENST00000408888|RBM34;ENST00000495224.1_1_1:235295030-235299397:-|nuORF 79.59630418116434 0.0079568537026334 6 V{I|L}{M(Oxidation (M))|F}ENTDSV[H{I|L}] 11 0 + 107.47 0.0 0.0 8.4448 8.4448 96.344 0.0 0.0 0.0 91.09630757282244 7.367585652254192 7.367585652254192 16.870773275331146 0 0.9247425010840048 2.0 1.2302046884880935 0.7742275032520141 + + V{I|L}{M(Oxidation (M))|F}ENTDSV[H{I|L}];V{I|L}{M(Oxidation (M))|F}EGGTDSV[H{I|L}];V{I|L}{M(Oxidation (M))|F}ENTD{[HG]|PP}{[QN]|[E{I|L}]|[KN]};V{I|L}{M(Oxidation (M))|F}EGGTD{[HG]|PP}{[QN]|[E{I|L}]|[KN]};V{I|L}{M(Oxidation (M))|F}E[YV]{[{M(Oxidation (M))|F}D]|MM}{[QN]|[E{I|L}]|[KN]};V{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}MHH{[ET]|[MV]};V{I|L}{M(Oxidation (M))|F}E[YV]HH{[ET]|[MV]};V{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}M{[{M(Oxidation (M))|F}D]|MM}{[QN]|[E{I|L}]|[KN]};V{I|L}{M(Oxidation (M))|F}[YN][YN]V{[QN]|[E{I|L}]|[KN]};V{I|L}[RH]M[YN]V{[QN]|[E{I|L}]|[KN]} 8.4448;7.1191;6.8331;6.1158;5.691;5.4711;5.4575;5.3708;4.9208;4.4687 +;-;-;-;-;-;-;-;-;- + 431 + 1 1.499 53627.2 0.6100000143051147 3356 5615 8972 SUDHL4_400M_050219_2,8973 SUDHL4_400M_050219_2,8973,VLFENTDSVHL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8974 49.777 415.0 173490.0 25 0 16455.0 + 16702 KESEVFYEL 9 91 572.28205840446 1142.54956387572 2 572.2819091677666 MULTI CID FTMS 0 0 0 8972 203602.75 1.0 0 0.0 2 Unmodified _KESEVFYEL_ ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-2|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A 57.72198328787511 0.0273433238377839 6 [YE]K{[CP]|[EA]}VYE{I|L} 9 4 + 61.282 0.0 0.0 5.3636 5.3636 76.632 0.0 0.0 0.0 0.7648373010427179 16.478174818886373 0.7648373010427179 0.7648373010427179 0 0.6861818737241735 1.5228787452803376 0.7302046884880937 0.3807196863200844 [YE]K{[CP]|[EA]}VYE{I|L};{[ES]|[DT]|[{I|L}C]}EKV{M(Oxidation (M))|F}YE{I|L};[YE]{I|L}{[QS]|[NT]}VYE{I|L};[YE]{I|L}G{[SA]|[TG]}VYE{I|L};[YE]{M(Oxidation (M))|F}{[WT]|[RM]}GVE{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{M(Oxidation (M))|F}[PA]{M(Oxidation (M))|F}YE{I|L};[YE]{M(Oxidation (M))|F}K{[ES]|[DT]|[{I|L}C]}VE{I|L};[YE]K{[CP]|[EA]}YVE{I|L};[YE]{I|L}{[QS]|[NT]}YVE{I|L};[YE]{I|L}G{[SA]|[TG]}YVE{I|L} 5.3636;5.2967;5.2788;5.2538;5.1845;5.1729;5.0304;5.0304;4.9456;4.9206 -;-;-;-;-;-;-;-;-;- 1062 1 1.499 61846.7 1.0 3357 5615 8972 SUDHL4_400M_050219_2,8974 SUDHL4_400M_050219_2,8974,KESEVFYEL True True KESEVFYEL 49.776904 572.281909167767 1003797.75 8972.0 nc|ENSG00000100644|Q16665-2|HIF1A;;nc|ENSG00000100644|Q16665-3|HIF1A;;ENSG00000100644|ENST00000337138|HIF1A 4.069728374481201 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8975 49.787 556.0 116540.0 25 0 29444.0 -1 VFFLIVVICK 10 65 619.3712696963673 1236.7279864595346 2 619.3717529177666 MULTI CID FTMS 0 0 0 8972 166425.65625 1.0 0 0.0 3 Carbamidomethyl (C) _VFFLIVVIC(Carbamidomethyl (C))K_ ENSG00000134294|ENST00000256689|SLC38A2;nc|ENSG00000134294|Q96QD8-2|SLC38A2 1.844237919475145 0.7181058121064529 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 2 1 1.499 54576.9 1.0 3358 5615 8972 SUDHL4_400M_050219_2,8975 SUDHL4_400M_050219_2,8975,VFFLIVVICK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8976 49.801 800.0 190590.0 25 0 19450.0 -1 0 97 671.0066147031382 2009.9980147096144 3 671.0074951052666 MULTI CID FTMS 0 0 0 8972 114591.25 0.1350793615008863 -5 0.280120849609375 4 6 [NP]{I|L}H{I|L}N[YE]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}H{I|L}K[NS] 17 -1 + 48.582 0.0 0.0 2.417 2.417 72.886 0.0 0.0 0.0 2.0438419437422226 20.382515052127573 2.0438419437422226 3.590219426416681 0 0.2742275032520141 0.0 0.0 1.055462187404089 [NP]{I|L}H{I|L}N[YE]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}H{I|L}K[NS];{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}N[YE]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}H{I|L}K[NS];{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}N[YE]D{[CT]|[{M(Oxidation (M))|F}G]}{I|L}H{I|L}Q[NS];[NP]{I|L}H{I|L}N[YE]D[H{I|L}]G{M(Oxidation (M))|F}{I|L}K[NS];{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}N[YE]D[H{I|L}]G{M(Oxidation (M))|F}{I|L}K[NS];{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}N[YE]D[H{I|L}]G{M(Oxidation (M))|F}{I|L}Q[NS];{[QV]|[N{I|L}]|[RA]|[KV]}PH{I|L}N[YE][YQ]M{M(Oxidation (M))|F}{I|L}K[NS] 2.417;2.2384;2.2384;2.1035;1.9249;1.9249;1.74 -;-;-;-;-;-;- 1030 1 1.499 122607.1 0.4799999892711639 3359 5615 8972 SUDHL4_400M_050219_2,8976 SUDHL4_400M_050219_2,8976, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8978 49.817 800.0 106260.0 25 0 8491.8 + 25138 MQIFVKTL 8 120 490.285549775853 978.556546618506 2 490.2858459353447 MULTI CID FTMS 0 0 0 8977 78409.046875 0.7218281652826846 1 -0.0262451171875 1 Unmodified _MQIFVKTL_ ENSG00000143947|ENST00000272317|RPS27A;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000150991|ENST00000339647|UBC;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000170315|ENST00000302182|UBB;ENSG00000221983|ENST00000442744|UBA52;ENST00000463185.1_1_2:55459960-55460026:+|nuORF;ENST00000471772.6_1_2:55459960-55460558:+|nuORF;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENST00000598814.1_1_19:18682694-18684218:+|nuORF 56.17704186161178 0.1143274477948619 6 {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{M(Oxidation (M))|F}VKT{I|L} 8 0 + 53.724 0.0 0.0 5.4901 5.4901 90.93 0.0 0.0 0.0 41.505637917945954 20.349242696482065 20.349242696482065 31.338127737855537 0 1.089136830878453 0.8538719643217619 1.0629529932484498 0.0 + + {[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{M(Oxidation (M))|F}VKT{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}{M(Oxidation (M))|F}{I|L}{I|L}[KS];{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[ET]|[MV]}KK[KS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}V{[ET]|[MV]}R[KS];[{I|L}T][{M(Oxidation (M))|F}E][RV][KS];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VC(Carbamidomethyl (C)){I|L}{I|L}[KS] 5.4901;2.2877;2.1352;0.29159;0.20287;0.13768 +;-;-;-;-;- + 502 + 1 1.499 71887.4 0.449999988079071 3360 5616 8977 SUDHL4_400M_050219_2,8978 SUDHL4_400M_050219_2,8978,MQIFVKTL True True MQIFVKTL 49.816869 490.285845935345 401675.0 8977.0 ENSG00000143947|ENST00000272317|RPS27A;;ENST00000598814.1_1_19:18682694-18684218:+|nuORF;;ENST00000463185.1_1_2:55459960-55460026:+|nuORF;;ENST00000471772.6_1_2:55459960-55460558:+|nuORF;;ENST00000495843.1_1_2:55459960-55461412:+|nuORF;;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;;ENSG00000170315|ENST00000302182|UBB;;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;;ENSG00000221983|ENST00000442744|UBA52;;ENST00000478196.6_1_2:55459960-55462152:+|nuORF;;ENSG00000150991|ENST00000339647|UBC 4.40377688407898 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8979 49.827 563.0 139040.0 25 0 8599.8 43413 WRCWTWPWREW 11 96 846.3858259301177 1690.7570989270353 2 846.8887817263603 MULTI CID FTMS 0 0 0 8977 195998.734375 1.0 0 0.0 2 Unmodified _WRCWTWPWREW_ ENST00000374279.3_1_9:114659094-114659565:+|nuORF 0.3070304955306653 0.8736993455979228 6 [KT]EY{M(Oxidation (M))|F}WQQ[CS]C(Carbamidomethyl (C))V{I|L} 13 12 + 85.654 0.0 0.0 5.066 5.066 57.438 0.0 0.0 0.0 40.51480369758831 8.438358950636541 8.438358950636541 0.0 0 0.2742275032520141 0.0 1.0 2.1989700043360187 [KT]EY{M(Oxidation (M))|F}WQQ[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}WQQ[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}W[AG]Q[CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}WQQ[CS][CG]V{I|L};[KT]EY{M(Oxidation (M))|F}WQQ[CS]V[CG]{I|L};[KT]EY{M(Oxidation (M))|F}W[AG]Q[CS]C(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}WQ[AG][CS]VC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}WQ[AG][CS]C(Carbamidomethyl (C))V{I|L};[KT][Y{M(Oxidation (M))|F}]EWQQ[CS]C(Carbamidomethyl (C))V{I|L};[KT][Y{M(Oxidation (M))|F}]EWQQ[CS]VC(Carbamidomethyl (C)){I|L} 5.066;5.066;4.5294;4.5294;4.5294;4.5294;4.2782;4.2782;3.3275;3.3275 -;-;-;-;-;-;-;-;-;- 5106 + 1 1.499 57197.6 1.0 3361 5616 8977 SUDHL4_400M_050219_2,8979 SUDHL4_400M_050219_2,8979,WRCWTWPWREW False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8981 49.842 757.0 113870.0 25 0 14909.0 + 1794 ALSGLAVRL 9 104 450.2871441667553 898.5597354003106 2 450.2868224978447 MULTI CID FTMS 0 0 0 8980 124281.390625 1.0 0 0.0 1 Unmodified _ALSGLAVRL_ ENSG00000178947|ENST00000417443|SMIM10L2A;ENSG00000184785|ENST00000330288|SMIM10;ENSG00000196972|ENST00000433425|SMIM10L2B;ENST00000533877.1_1_7:6381544-6388389:-|nuORF;nc|ENSG00000286075|A0A0C4DGP1|SMIM10L3 49.93300154707207 0.0405168250806675 6 [{I|L}A]SG{I|L}AV[R{I|L}] 9 0 + 64.261 0.0 0.0 7.1516 7.1516 89.322 0.0 0.0 0.0 50.28180479789823 5.400217704352457 5.400217704352457 8.010299956639813 0 1.2134679910804405 2.0 0.0 0.3252574989159953 + + [{I|L}A]SG{I|L}AV[R{I|L}];[{I|L}A]S{I|L}GAV[R{I|L}];[{I|L}A]SG{I|L}{I|L}[RV]A;[{I|L}A]SG{I|L}{I|L}G[R{I|L}];[{I|L}A]{I|L}SGAV[R{I|L}];[{I|L}A]S{I|L}QV[R{I|L}];[{I|L}A]S{I|L}G{I|L}[RV]A;[{I|L}A]S{I|L}G{I|L}G[R{I|L}];[{I|L}A]{I|L}SQV[R{I|L}];[{I|L}A]{I|L}SG{I|L}[RV]A 7.1516;6.2601;6.0315;5.9236;5.6038;5.5392;5.14;5.0321;4.8828;4.4837 +;-;-;-;-;-;-;-;-;- + 188 + 1 1.499 71863.9 1.0 3362 5617 8980 SUDHL4_400M_050219_2,8981 SUDHL4_400M_050219_2,8981,ALSGLAVRL True True ALSGLAVRL 49.842404 450.286822497845 684444.4375 8980.0 nc|ENSG00000286075|A0A0C4DGP1|SMIM10L3;;ENSG00000196972|ENST00000433425|SMIM10L2B;;ENSG00000178947|ENST00000417443|SMIM10L2A;;ENST00000533877.1_1_7:6381544-6388389:-|nuORF;;ENSG00000184785|ENST00000330288|SMIM10 3.2065541744232178 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8982 49.856 800.0 44354.0 25 0 12604.0 31714 RRRHAFRRQA 10 61 677.3953176337411 1352.776082334282 2 677.3940917849541 MULTI CID FTMS 0 0 0 8980 84946.5390625 0.1579543916003702 13 -0.6086502075195312 2 Unmodified _RRRHAFRRQA_ ENSG00000022567|ENST00000517878|SLC45A4;nc|ENSG00000022567|Q5BKX6-2|SLC45A4;nc|ENSG00000022567|Q5BKX6-3|SLC45A4;nc|ENSG00000022567|Q5BKX6|SLC45A4 1.6526216038709556 0.7189921496796233 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.499 36548.8 0.4099999964237213 3363 5617 8980 SUDHL4_400M_050219_2,8982 SUDHL4_400M_050219_2,8982,RRRHAFRRQA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8983 49.864 438.0 178460.0 25 0 24518.0 + + 18872 ALSSVIKEL 9 107 480.29234250715456 958.5701320811093 2 480.2919494509697 MULTI CID FTMS 0 0 0 8980 121927.28125 0.4100775060993893 -2 0.0749740600585937 3 Unmodified _LASSVISLGL_ ENSG00000204899|ENST00000377818|MZT1 49.93300154707207 0.0805441195901191 6 [{I|L}A]SVV{[CA]|SS}A{I|L}{I|L} 10 -1 + 58.945 0.0 0.0 6.1493 6.1493 80.709 0.0 0.0 0.0 20.85460729508501 16.53212513775344 16.53212513775344 1.7609125905568137 0 0.9247425010840048 2.0 0.7302046884880937 0.0 [{I|L}A]SVV{[CA]|SS}A{I|L}{I|L};[{I|L}A]SVV{[CA]|SS}{I|L}A{I|L};[{I|L}A]S[TA]{[TV]|[{I|L}S]}A{I|L}{I|L};[{I|L}A]S[TA]{[TV]|[{I|L}S]}{I|L}A{I|L};{[TV]|[{I|L}S]}AVV{[CA]|SS}A{I|L}{I|L};{[TV]|[{I|L}S]}AVV{[CA]|SS}{I|L}A{I|L};{[TV]|[{I|L}S]}G{I|L}V{[CA]|SS}A{I|L}{I|L};{[TV]|[{I|L}S]}G{I|L}V{[CA]|SS}{I|L}A{I|L};[VS]S{I|L}G{[TV]|[{I|L}S]}A{I|L}{I|L};[K{I|L}]EV{[CA]|SS}A{I|L}{I|L} 6.1493;5.9656;4.6037;4.42;3.9737;3.79;3.492;3.3083;3.2383;3.1459 -;-;-;-;-;-;-;-;-;- 596 1 1.499 66674.7 1.0 3364 5617 8980 SUDHL4_400M_050219_2,8983 SUDHL4_400M_050219_2,8983,LASSVISLGL False False ALSSVIKEL 49.864025 480.29194945097 1386052.5 8980.0 ENSG00000204899|ENST00000377818|MZT1 4.544134298960368 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8985 49.869 62.0 823410.0 25 0 40008.0 -1 0 75 881.9127705109156 1761.8109880886311 2 881.9055663943291 MULTI CID FTMS 0 0 0 -1 0 1 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]}{I|L} 16 -1 + 88.56 0.0 0.0 5.0266 5.0266 78.662 0.0 0.0 0.0 9.375554513600278 13.631030389436376 9.375554513600278 3.0102999566398125 0 0.0 1.5228787452803376 0.4247425010840047 0.7302046884880937 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQDA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQW{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QAQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};[YQ]V[CS]AGAQDA{M(Oxidation (M))|F}Y{[QV]|[N{I|L}]|[RA]|[KV]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQW{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QAQDA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};[YQ]V[CS]AGAQDA{M(Oxidation (M))|F}{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 5.0266;4.8558;4.6458;4.6458;4.6458;4.4945;4.4749;4.4749;4.4749;4.3236 -;-;-;-;-;-;-;-;-;- 3260 1 1.499 39352.6 1.0 3365 5618 8984 SUDHL4_400M_050219_2,8985 SUDHL4_400M_050219_2,8985, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8986 49.871 59.0 837770.0 25 0 50584.0 + 29582 QLTDLEQLL 9 94 536.7978215793179 1071.5810902254357 2 536.7979614138603 MULTI CID FTMS 0 0 0 8984 889952.9375 0.1871818528954673 4 -0.1684608459472656 2 Unmodified _QLTDLEQLL_ REV__ENSG00000096872|ENST00000380062|IFT74;REV__nc|ENSG00000096872|Q96LB3-2|IFT74 34.40172386719151 0.1061884637610825 6 {NN|[MP]|[D{I|L}]|[EV]}DKVE{I|L}Q{I|L} 9 -1 + 50.803 0.0 0.0 4.7409 4.7409 73.777 0.0 0.0 0.0 0.4196667741186033 16.478174818886373 0.4196667741186033 0.4196667741186033 0 0.3807196863200844 0.8860566476931632 0.75 0.0 {NN|[MP]|[D{I|L}]|[EV]}DKVE{I|L}Q{I|L};[Q{I|L}]{[ET]|[MV]}VE{I|L}Q{I|L};[Q{I|L}][{I|L}T]DE{I|L}Q{I|L};{NN|[MP]|[D{I|L}]|[EV]}DKVE{I|L}[AG]{I|L};[Q{I|L}]{[ET]|[MV]}VE{I|L}[AG]{I|L};[Q{I|L}][{I|L}T]DE{I|L}[AG]{I|L};DD{I|L}KVE{I|L}Q{I|L};{[QN]|[E{I|L}]|[KN]}[QT]VE{I|L}Q{I|L};[AG]{I|L}{[ET]|[MV]}VE{I|L}Q{I|L};[AG]{I|L}[{I|L}T]DE{I|L}Q{I|L} 4.7409;4.7017;4.5654;3.8816;3.8424;3.7061;3.5945;3.4236;3.2426;3.1063 -;-;-;-;-;-;-;-;-;- 321 1 1.499 43767.1 1.0 3366 5618 8984 SUDHL4_400M_050219_2,8986 SUDHL4_400M_050219_2,8986,QLTDLEQLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8987 49.878 388.0 192080.0 25 0 30210.0 + 34074 SLLESVQKL 9 102 508.8031914280384 1015.5918299228769 2 508.8033630251884 MULTI CID FTMS 0 0 0 8984 117780.5390625 0.1692083350131556 4 -0.1684608459472656 3 Unmodified _SLLESVQKL_ ENSG00000175054|ENST00000350721|ATR;nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR 45.69961567697781 0.0497987121815769 6 {[TV]|[{I|L}S]}{I|L}E[VS]QK{I|L} 9 0 + 69.816 0.0 0.0 6.8744 6.8744 86.413 0.0 0.0 0.0 34.71726222832956 14.09256854528806 14.09256854528806 5.0 0 1.1989700043360187 2.0 0.3494850021680094 0.5 + + {[TV]|[{I|L}S]}{I|L}E[VS]QK{I|L};{[TV]|[{I|L}S]}{I|L}EK{[DA]|[EG]}K{I|L};{[TV]|[{I|L}S]}{I|L}E[VS][AG]K{I|L};{[TV]|[{I|L}S]}{I|L}EKVV[QT] 6.8744;6.3821;5.9677;4.8219 +;-;-;- + 740 + 1 1.499 59292.0 1.0 3367 5618 8984 SUDHL4_400M_050219_2,8987 SUDHL4_400M_050219_2,8987,SLLESVQKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8988 49.884 351.0 234370.0 25 0 25987.0 19512 LFLSIPCVL 9 90 502.7974166855405 1003.580280437881 2 502.7972900271416 MULTI CID FTMS 0 0 0 8984 122823.0625 0.2144387001396514 -4 0.1896896362304687 4 Unmodified _LFLSIPCVL_ ENSG00000166796|ENST00000541669|LDHC 32.116972079565 0.1225432171549407 6 A{I|L}S{I|L}{I|L}E 6 6 45.054 0.0 0.0 4.4894 0.0 0.0 359.1841297834 0.0 359.1841297834 0.0 32.290280966281735 0.0 0.0 0 0.805462187404089 0.0 0.0 0.0 A{I|L}S{I|L}{I|L}E 4.4894 - 167 1 1.499 70280.3 1.0 3368 5618 8984 SUDHL4_400M_050219_2,8988 SUDHL4_400M_050219_2,8988,LFLSIPCVL True False FLLSLRGAGA 49.884193 502.797290027142 3298105.5 8984.0 ENSG00000231389|ENST00000419277|HLA-DPA1;;ENST00000479107.1_1_6:33037343-33041347:-|nuORF;;chr6:33065347-33073471|11|13.45|0.09|7.27|-|2|HLA-DPA1,HLA-DPA1|1 1.1148344278335571 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8989 49.898 800.0 112690.0 25 0 7570.4 -1 0 97 965.9560182928814 1929.8974836525624 2 966.4583618044852 MULTI CID FTMS 0 0 0 8984 108615.65625 0.5077110501656119 -4 0.1896896362304687 5 6 [NP]{I|L}NAD{[QG]|[NA]}R{[HG]|PP}AN{I|L}DV[HC] 18 -1 + 54.998 0.0 0.0 2.8498 2.8498 70.874 0.0 0.0 0.0 7.437907261849531 5.341955911371059 5.341955911371059 1.7414642061098675 0 0.5 1.0 0.4247425010840047 0.3054621874040891 [NP]{I|L}NAD{[QG]|[NA]}R{[HG]|PP}AN{I|L}DV[HC];[NP]{I|L}N{M(Oxidation (M))|F}[HS]R{[HG]|PP}AN{I|L}DV[HC];[NP]{I|L}NAD{[QG]|[NA]}R[HQ]N{I|L}DV[HC];[NP]{I|L}N{M(Oxidation (M))|F}[HS]R[HK]N{I|L}DV[HC];[NP]{I|L}N{M(Oxidation (M))|F}[HS]R[HQ]N{I|L}DV[HC];[NP]VQAD{[QG]|[NA]}R{[HG]|PP}AN{I|L}DV[HC];EEVD{I|L}NA{[HG]|PP}R{[QG]|[NA]}DYQ{[TV]|[{I|L}S]};[NP]{I|L}NA{[WN]|[YH]}R{[HG]|PP}AN{I|L}DV[HC];[NP]VQ{M(Oxidation (M))|F}[HS]R{[HG]|PP}AN{I|L}DV[HC];[NP]VQAD{[QG]|[NA]}R[HQ]N{I|L}DV[HC] 2.8498;2.7596;2.6565;2.567;2.567;2.4876;2.4644;2.4364;2.3974;2.2943 -;-;-;-;-;-;-;-;-;- 1834 1 1.499 64308.9 0.4300000071525574 3369 5618 8984 SUDHL4_400M_050219_2,8989 SUDHL4_400M_050219_2,8989, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8990 49.91 674.0 126490.0 25 0 13889.0 + 35845 SVLDYFSER 9 89 558.2722779116117 0 558.2725097537041 PEAK CID FTMS 0 0 0 8984 91762.6640625 0.9406812687065144 -2 0.0635223388671875 6 Unmodified _SVLDYFSER_ ENSG00000133997|ENST00000256379|MED6;ENST00000553611.5_1_14:71060082-71067354:-|nuORF;ENST00000554870.5_1_14:71059985-71067354:-|nuORF;ENST00000556044.5_1_14:71060086-71067354:-|nuORF;ENST00000556423.1_1_14:71063310-71067354:-|nuORF;ENST00000556495.5_1_14:71059591-71067354:-|nuORF;nc|ENSG00000133997|O75586-2|MED6;nc|ENSG00000133997|O75586-3|MED6 28.49450938151212 0.124065572374239 6 {I|L}DY{M(Oxidation (M))|F} 4 5 31.186 0.0 0.0 2.7981 0.0 0.0 186.101408000378 387.1624544733032 573.2638624736811 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 + {I|L}DY{M(Oxidation (M))|F} 2.7981 + + 72 + 1 1.499 69565.6 1.0 3370 5618 8984 SUDHL4_400M_050219_2,8990 SUDHL4_400M_050219_2,8990,SVLDYFSER True True SVLDYFSER 49.909797 558.272509753704 515185.5 8984.0 ENST00000556495.5_1_14:71059591-71067354:-|nuORF;;ENST00000554870.5_1_14:71059985-71067354:-|nuORF;;ENST00000556044.5_1_14:71060086-71067354:-|nuORF;;ENST00000553611.5_1_14:71060082-71067354:-|nuORF;;nc|ENSG00000133997|O75586-3|MED6;;nc|ENSG00000133997|O75586-2|MED6;;ENST00000556423.1_1_14:71063310-71067354:-|nuORF;;ENSG00000133997|ENST00000256379|MED6 8.278250694274902 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8992 49.915 48.0 830010.0 25 0 101560.0 + 12696 GVLPNIQAV 9 67 455.7717536413603 909.5289543495206 2 455.7715026736259 MULTI CID FTMS 0 0 0 8991 1202448.125 0.9887629743478944 1 -0.0375938415527343 1 Unmodified _GVLPNIQAV_ ENSG00000164508|ENST00000297012|H2AC1;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000184270|ENST00000331128|H2AC21;ENSG00000188486|ENST00000530167|H2AX;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000274997|ENST00000377459|H2AC12;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000278677|ENST00000359611|H2AC17;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;nc|ENSG00000246705|Q9BTM1-2|H2AJ;nc|ENSG00000288859|Q6FI13|H2AC18 30.22481116460888 0.1466181017706357 6 [VG][KG]{I|L}W 6 6 28.178 0.0 0.0 3.0981 0.0 0.0 0.0 266.15185409000816 266.15185409000816 2.46462170693448 0.0 0.0 0.0 0 0.9247425010840048 1.5228787452803376 0.0 0.8807196863200843 [VG][KG]{I|L}W 3.0981 - 159 1 1.499 35211.0 1.0 3371 5619 8991 SUDHL4_400M_050219_2,8992 SUDHL4_400M_050219_2,8992,GVLPNIQAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8993 49.92 279.0 149950.0 25 0 22429.0 + 1577 ALLEQVNAL 9 71 485.7824654382872 969.5503779433744 2 485.7831298708916 MULTI CID FTMS 0 0 0 8991 154521.46875 0.6779117570364017 -2 0.0830497741699218 2 Unmodified _ALLEQVNAL_ ENSG00000137100|ENST00000259632|DCTN3;ENST00000479399.5_1_9:34616009-34616228:-|nuORF;nc|ENSG00000137100|O75935-2|DCTN3 19.438996006549623 0.310492472477042 6 [{I|L}A]{I|L}EE 5 5 31.682 0.0 0.0 3.2677 0.0 0.0 0.0 411.2225330549557 411.2225330549557 11.677353201839438 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [{I|L}A]{I|L}EE 3.2677 - 112 1 1.499 39240.6 1.0 3372 5619 8991 SUDHL4_400M_050219_2,8993 SUDHL4_400M_050219_2,8993,ALLEQVNAL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8994 49.934 800.0 191010.0 25 0 16623.0 + 31256 RLVEIQYEL 9 133 581.8275906794399 1161.6406284256798 2 581.8278686404228 MULTI CID FTMS 0 0 0 8991 155658.234375 0.4833514195610534 -3 0.1092948913574218 3 Unmodified _RLVEIQYEL_ ENSG00000139436|ENST00000355312|GIT2;ENST00000551455.5_1_12:110388962-110434038:-|nuORF;nc|ENSG00000139436|Q14161-10|GIT2;nc|ENSG00000139436|Q14161-11|GIT2;nc|ENSG00000139436|Q14161-2|GIT2;nc|ENSG00000139436|Q14161-3|GIT2;nc|ENSG00000139436|Q14161-4|GIT2;nc|ENSG00000139436|Q14161-5|GIT2;nc|ENSG00000139436|Q14161-6|GIT2;nc|ENSG00000139436|Q14161-7|GIT2;nc|ENSG00000139436|Q14161-8|GIT2;nc|ENSG00000139436|Q14161-9|GIT2 49.55428908609986 0.0413471690215031 6 PS{I|L}QYE{I|L} 7 4 75.566 0.0 0.0 6.5051 0.0 0.0 313.19929701972814 0.0 313.19929701972814 0.0 46.66463859409312 0.0 0.0 0 1.7302046884880935 0.0 0.0 1.079689690656103 PS{I|L}QYE{I|L} 6.5051 - 327 1 1.499 117620.2 0.5799999833106995 3373 5619 8991 SUDHL4_400M_050219_2,8994 SUDHL4_400M_050219_2,8994,RLVEIQYEL True True RLVEIQYEL 49.933553 581.827868640423 1760099.5 8991.0 ENST00000551455.5_1_12:110388962-110434038:-|nuORF;;nc|ENSG00000139436|Q14161-3|GIT2;;nc|ENSG00000139436|Q14161-5|GIT2;;nc|ENSG00000139436|Q14161-11|GIT2;;nc|ENSG00000139436|Q14161-2|GIT2;;nc|ENSG00000139436|Q14161-8|GIT2;;nc|ENSG00000139436|Q14161-10|GIT2;;nc|ENSG00000139436|Q14161-9|GIT2;;nc|ENSG00000139436|Q14161-4|GIT2;;nc|ENSG00000139436|Q14161-6|GIT2;;nc|ENSG00000139436|Q14161-7|GIT2;;ENSG00000139436|ENST00000355312|GIT2 4.914615948994954 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 8995 49.947 800.0 204740.0 25 0 16954.0 -1 YQRCKWEYQMI 11 107 782.3577115797281 1562.700870226256 2 782.3568603396416 MULTI CID FTMS 0 0 0 8991 130401.625 0.1555246375342377 -4 0.1580238342285156 4 Oxidation (M) _YQRCKWEYQM(Oxidation (M))I_ ENST00000527531.5_1_11:108253785-108256679:-|nuORF 5.296884461304476 0.8501568894076437 6 [HD]EAQQDA{M(Oxidation (M))|F}YQV{I|L} 13 -1 + 123.9 0.0 0.0 7.9286 7.9286 85.485 0.0 0.0 0.0 2.1387289414908253 16.642078980768062 2.1387289414908253 2.1387289414908253 0 1.4291746928241125 0.0 2.142642683904553 1.6237125054200234 [HD]EAQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QDA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQDA{M(Oxidation (M))|F}Y[AG]V{I|L};[HD]EAQ[AG]DA{M(Oxidation (M))|F}YQV{I|L};[HD]EA[AG]QDA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QDA{M(Oxidation (M))|F}YQV{I|L};[HD]EAQQW{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]DA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QDA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QW{M(Oxidation (M))|F}YQV{I|L} 7.9286;7.7917;7.348;7.348;7.348;7.2959;7.2318;7.2112;7.2112;7.0949 -;-;-;-;-;-;-;-;-;- 5316 1 1.499 118106.0 0.4900000095367431 3374 5619 8991 SUDHL4_400M_050219_2,8995 SUDHL4_400M_050219_2,8995,YQRCKWEYQMI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 8997 49.96 513.0 275790.0 25 0 25654.0 -1 0 112 1005.5044266540656 2008.9943003749315 2 1005.505114734173 MULTI CID FTMS 0 0 0 8996 110576.4296875 1.0 0 0.0 1 6 H{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}NEE[WQ]HVV{I|L}D 15 -1 94.263 0.0 0.0 4.6921 0.0 0.0 0.0 182.05697046451408 182.05697046451408 46.60687319439528 0.0 0.0 0.0 0 1.6883753548010496 1.6989700043360187 0.9674165578762486 0.3494850021680094 H{I|L}P{[QV]|[N{I|L}]|[RA]|[KV]}NEE[WQ]HVV{I|L}D 4.6921 - 10572 + 1 1.499 95836.8 1.0 3375 5620 8996 SUDHL4_400M_050219_2,8997 SUDHL4_400M_050219_2,8997, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 8998 49.974 800.0 50200.0 25 0 13443.0 + -1 NVLLRKIDKCR 11 63 707.9214314711262 1413.8283100090523 2 707.9216796755791 MULTI CID FTMS 0 0 0 8996 96112.15625 0.9545036456996168 1 -0.0544624328613281 2 Carbamidomethyl (C) _NVLLRKIDKC(Carbamidomethyl (C))R_ REV__ENSG00000198952|ENST00000361813|SMG5 2.498486711656943 0.8633599123570009 6 K 1 -1 1.1092 0.0 0.0 0.078457 0.0 0.0 999.5820159190116 283.1194857233032 1282.701501642315 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.078457 + + 11 + 1 1.499 40074.8 0.4399999976158142 3376 5620 8996 SUDHL4_400M_050219_2,8998 SUDHL4_400M_050219_2,8998,NVLLRKIDKCR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 8999 49.988 800.0 93970.0 25 0 9191.5 + 14732 ILADWNEDIEA 11 98 644.8064478546507 1287.5983427761014 2 644.8066284060478 MULTI CID FTMS 0 0 0 8996 93882.625 1.0 0 0.0 3 Unmodified _ILADWNEDIEA_ ENSG00000116406|ENST00000318130|EDEM3;nc|ENSG00000116406|Q9BZQ6-2|EDEM3 28.181266145913348 0.4304979014012044 6 {[QD]|[EN]|[WG]|[KD]|[RS]}DWDA{I|L}{I|L} 8 8 36.208 0.0 0.0 2.8121 0.0 0.0 0.0 328.1512585596467 328.1512585596467 16.32113673878116 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 1.079689690656103 {[QD]|[EN]|[WG]|[KD]|[RS]}DWDA{I|L}{I|L} 2.8121 - 879 1 1.499 67267.5 0.449999988079071 3377 5620 8996 SUDHL4_400M_050219_2,8999 SUDHL4_400M_050219_2,8999,ILADWNEDIEA False True ILADWNEDIEA 49.988022 644.806628406048 632849.5 8996.0 nc|ENSG00000116406|Q9BZQ6-2|EDEM3;;ENSG00000116406|ENST00000318130|EDEM3 5.677385330200195 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9000 50.002 800.0 205840.0 25 0 13213.0 + -1 HLSDMLQQL 9 141 550.7744958017172 1099.5344386702343 2 550.7764770388603 MULTI CID FTMS 0 0 0 8996 103635.515625 0.2707554289690996 -4 0.1468887329101562 4 Oxidation (M) _HLSDM(Oxidation (M))LQQL_ ENST00000562407.1_1_16:23695226-23699079:+|nuORF;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;ENSG00000166851|ENST00000300093|PLK1 32.30548876998284 0.1201446275138228 6 {[TV]|[{I|L}S]}[HD]{M(Oxidation (M))|F}{I|L}QQ{I|L} 9 -1 + 37.756 0.0 0.0 3.4338 3.4338 76.223 0.0 0.0 0.0 7.596069897241925 7.319845938712042 7.319845938712042 5.440680443502757 0 0.8424778212679485 2.0 0.0 0.0 {[TV]|[{I|L}S]}[HD]{M(Oxidation (M))|F}{I|L}QQ{I|L};{[TV]|[{I|L}S]}[HD]{M(Oxidation (M))|F}Q{I|L}Q{I|L};N[H{I|L}]E{M(Oxidation (M))|F}S{I|L}Q{I|L};[HQ]VE{M(Oxidation (M))|F}S{I|L}Q{I|L};{[TV]|[{I|L}S]}[HD]{M(Oxidation (M))|F}{I|L}[AG]Q{I|L};{[TV]|[{I|L}S]}[CS]P[QP]QQ{I|L};[Y{I|L}][YC(Carbamidomethyl (C))]{I|L}QQ{I|L};{[TV]|[{I|L}S]}Y[WY]QQ{I|L};{[TV]|[{I|L}S]}[HD]{M(Oxidation (M))|F}[AG]{I|L}Q{I|L};{[TV]|[{I|L}S]}[HN]{I|L}[{M(Oxidation (M))|F}E]Q{I|L} 3.4338;2.939;2.743;2.743;2.5964;2.4828;2.3702;2.2971;2.1016;1.9391 -;-;-;-;-;-;-;-;-;- 2231 1 1.499 126398.7 0.4699999988079071 3378 5620 8996 SUDHL4_400M_050219_2,9000 SUDHL4_400M_050219_2,9000,HLSDMLQQL False False HLSDMLQQL 50.001853 550.77647703886 2270327.5 8996.0 ENST00000562407.1_1_16:23695226-23699079:+|nuORF;;ENST00000562272.5_1_16:23691188-23701381:+|nuORF;;ENSG00000166851|ENST00000300093|PLK1 5.288769721984863 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9002 50.009 171.0 196450.0 25 0 56037.0 + -1 RYMKKKKTLW 10 56 699.4082512844325 1396.8019496356649 2 699.4084350466728 MULTI CID FTMS 0 0 0 9001 344014.15625 1.0 0 0.0 1 Oxidation (M) _RYM(Oxidation (M))KKKKTLW_ REV__ENST00000499247.2_1_17:48940312-48940357:-|nuORF 1.6526216038709556 0.7189921496796233 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.499 35282.6 1.0 3379 5621 9001 SUDHL4_400M_050219_2,9002 SUDHL4_400M_050219_2,9002,RYMKKKKTLW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9003 50.01 16.0 2967100.0 25 0 155020.0 -1 0 62 881.4141671991518 0 881.4135009646416 PEAK CID FTMS 0 0 0 9001 2950333.5 0.1723393893753502 -5 0.2013511657714843 2 6 EY{M(Oxidation (M))|F}ANQQAH 9 -1 59.474 0.0 0.0 3.3776 0.0 0.0 229.1794563692036 440.1570833795532 669.3365397487568 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 EY{M(Oxidation (M))|F}ANQQAH 3.3776 - 414 + 1 1.499 39989.8 1.0 3380 5621 9001 SUDHL4_400M_050219_2,9003 SUDHL4_400M_050219_2,9003, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9004 50.015 279.0 285450.0 25 0 46883.0 + 9309 FIFSDTHEL 9 80 554.7688375209393 1107.5231221086783 2 554.7689086794853 MULTI CID FTMS 0 0 0 9001 171879.65625 0.2361276205162726 -4 0.1751060485839843 3 Unmodified _FIFSDTHEL_ ENSG00000102699|ENST00000381989|PARP4 39.957323273325 0.0756908302845263 6 {[YC]|[HE]}SS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 9 6 + 40.511 0.0 0.0 3.6578 3.6578 72.464 0.0 0.0 0.0 1.6452935963211175 3.352255868010872 1.6452935963211175 1.6452935963211175 0 0.4247425010840047 0.0 1.3921590589602533 0.0 {[YC]|[HE]}SS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};[HT]DS{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[YC]|[HE]}SS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[QN]|[E{I|L}]|[KN]};[HT]DS{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{[QN]|[E{I|L}]|[KN]};{[YC]|[HE]}SS{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}{I|L};[HT]DS{M(Oxidation (M))|F}E{I|L}{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}T[YG]{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[YC]|[HE]}SS{M(Oxidation (M))|F}{I|L}E{M(Oxidation (M))|F}{I|L};[HT]E[YG]{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[YC]|[HE]}T[YG]{M(Oxidation (M))|F}{I|L}{[QN]|[E{I|L}]|[KN]} 3.6578;3.5092;3.4563;3.3077;3.0244;2.8758;2.8264;2.7025;2.6778;2.6248 -;-;-;-;-;-;-;-;-;- 611 1 1.499 66610.7 1.0 3381 5621 9001 SUDHL4_400M_050219_2,9004 SUDHL4_400M_050219_2,9004,FIFSDTHEL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9005 50.026 613.0 139360.0 25 0 14779.0 + 35897 SVMNSVVSL 9 127 476.2448664498641 950.475179966528 2 476.2447692751884 MULTI CID FTMS 0 0 0 9001 132130.625 0.578156909316777 -4 0.1751060485839843 4 Oxidation (M) _SVM(Oxidation (M))NSVVSL_ ENSG00000149100|ENST00000531120|EIF3M;ENST00000531186.5_1_11:32605433-32610279:+|nuORF 56.17704186161178 0.0281986971544335 6 [VS]{M(Oxidation (M))|F}NSV 6 3 38.527 0.0 0.0 4.0535 0.0 0.0 0.0 314.17461779295314 314.17461779295314 16.070502670049045 0.0 0.0 0.0 0 0.2742275032520141 1.5228787452803376 1.4604093769761874 0.0 + [VS]{M(Oxidation (M))|F}NSV 4.0535 + + 385 1 1.499 70211.8 1.0 3382 5621 9001 SUDHL4_400M_050219_2,9005 SUDHL4_400M_050219_2,9005,SVMNSVVSL True False SVMNSVVSL 50.026117 476.244769275188 1110399.125 9001.0 ENST00000531186.5_1_11:32605433-32610279:+|nuORF;;ENSG00000149100|ENST00000531120|EIF3M 6.784228324890137 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9006 50.032 354.0 126050.0 25 0 18415.0 + 24609 MLLFKRFISRS 11 74 466.6082401371121 1396.8028910115363 3 466.6082336306572 MULTI CID FTMS 0 0 0 9001 128268.8671875 0.8108326138680381 4 -0.1183738708496093 5 Unmodified _MLLFKRFISRS_ REV__ENSG00000153976|ENST00000284110|HS3ST3A1 1.1933415558491238 0.8695176722560516 6 V 1 -1 11.259 0.0 0.0 0.80606 0.0 0.0 1279.7235585914177 0.0 1279.7235585914177 0.0 4.269359821608809 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.80606 - 17 + 1 1.499 43507.6 1.0 3383 5621 9001 SUDHL4_400M_050219_2,9006 SUDHL4_400M_050219_2,9006,MLLFKRFISRS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9008 50.039 207.0 255280.0 25 0 24857.0 + 33745 SLAGDVALQQL 11 86 557.8086638549332 1113.6027747766664 2 557.8082763552666 MULTI CID FTMS 0 0 0 9007 235924.515625 0.191716626621504 -4 0.1684608459472656 1 Unmodified _SLAGDVALQQL_ ENSG00000010292|ENST00000315579|NCAPD2 47.74868867922204 0.1300977870992118 6 {[TV]|[{I|L}S]}NEVA 6 7 35.084 0.0 0.0 3.1505 0.0 0.0 0.0 497.27212227106014 497.27212227106014 1.7724019304691296 0.0 0.0 0.0 0 0.0 2.0 1.424742501084005 0.0 {[TV]|[{I|L}S]}NEVA 3.1505 - 1514 1 1.499 44621.1 1.0 3384 5622 9007 SUDHL4_400M_050219_2,9008 SUDHL4_400M_050219_2,9008,SLAGDVALQQL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9009 50.053 800.0 78272.0 25 0 9316.9 9585 FLKDLVASV 9 108 496.2939497378903 990.5733465425806 2 496.2939636111259 MULTI CID FTMS 0 0 0 9007 69186.5 0.7539164465299847 1 -0.0479927062988281 2 Unmodified _FLKDLVASV_ ENSG00000175550|ENST00000312515|DRAP1;ENST00000530791.5_1_11:65687742-65688356:+|nuORF;nc|ENSG00000175550|Q14919-2|DRAP1 12.531546534597751 0.4974689918368763 6 [{I|L}V]DK 4 7 16.031 0.0 0.0 1.6183 0.0 0.0 0.0 532.2769957947868 532.2769957947868 3.812281309285624 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 [{I|L}V]DK 1.6183 - 74 1 1.499 51257.9 0.4199999868869781 3385 5622 9007 SUDHL4_400M_050219_2,9009 SUDHL4_400M_050219_2,9009,FLKDLVASV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9010 50.067 800.0 147320.0 25 0 7836.2 -1 0 106 845.8933835264178 1689.7722141196357 2 845.8942748904228 MULTI CID FTMS 0 0 0 9007 128917.0078125 0.2185635775146144 -4 0.1684608459472656 3 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQNA{M(Oxidation (M))|F}YQV{I|L} 14 -1 + 127.07 0.0 0.0 7.5197 7.5197 88.051 0.0 0.0 0.0 5.184465535402296 9.999547704136448 5.184465535402296 5.184465535402296 0 1.3539171939081172 1.5228787452803376 1.7786596949921218 3.309894379144197 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS][AG]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]Q[AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ]V[CS][AG]QNA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]Q[AG]NA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QQGGA{M(Oxidation (M))|F}YQV{I|L};[YQ]V[CS]QQNA{M(Oxidation (M))|F}Y[AG]V{I|L} 7.5197;7.2129;6.9841;6.9841;6.9841;6.9841;6.6773;6.6773;6.6773;6.6773 -;-;-;-;-;-;-;-;-;- 6953 1 1.499 82458.2 0.4799999892711639 3386 5622 9007 SUDHL4_400M_050219_2,9010 SUDHL4_400M_050219_2,9010, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9011 50.08 800.0 158230.0 25 0 7996.9 -1 0 124 887.4116948736543 1772.8088368141084 2 888.4072753787041 MULTI CID FTMS 0 0 0 9007 127651.4375 0.3652314452078084 -9 0.4468536376953125 4 6 VEY{M(Oxidation (M))|F}ADQQAE[DG]C(Carbamidomethyl (C)){I|L} 14 -1 74.753 0.0 0.0 4.2166 0.0 0.0 129.1000021851624 0.0 129.1000021851624 0.0 43.863134508118506 0.0 0.0 0 0.0 0.0 0.3054621874040891 1.086696871556164 VEY{M(Oxidation (M))|F}ADQQAE[DG]C(Carbamidomethyl (C)){I|L} 4.2166 - 6034 + 1 1.499 88617.8 0.4799999892711639 3387 5622 9007 SUDHL4_400M_050219_2,9011 SUDHL4_400M_050219_2,9011, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9013 50.088 172.0 410400.0 25 0 101050.0 -1 0 53 671.0066147031382 2009.9980147096144 3 671.0071899294853 MULTI CID FTMS 0 0 0 9012 310763.6875 0.3663260544340077 3 -0.1090545654296875 1 6 {I|L}H{I|L}Q[NS] 6 -1 28.416 0.0 0.0 1.4138 0.0 0.0 1299.5863854173194 0.0 1299.5863854173194 0.0 3.182503180159344 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}H{I|L}Q[NS] 1.4138 - 112 1 1.499 60769.9 1.0 3388 5623 9012 SUDHL4_400M_050219_2,9013 SUDHL4_400M_050219_2,9013, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9014 50.102 800.0 102320.0 25 0 9532.4 + 1428 ALDQEIIEV 9 116 515.276513407344 1028.538473881488 2 515.2762328982353 MULTI CID FTMS 0 0 0 9012 129709.8671875 1.0 0 0.0 2 Unmodified _ALDQEIIEV_ ENSG00000182774|ENST00000647841|RPS17;ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENST00000461663.1_1_5:116052154-116052343:+|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF 47.74868867922204 0.0453060283459952 6 {NN|[MP]|[D{I|L}]|[EV]}AAGE{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 10 4 + 49.123 0.0 0.0 4.776 4.776 77.042 0.0 0.0 0.0 2.382915748054728 2.7545373444029053 2.382915748054728 2.382915748054728 0 0.0 0.7695510786217261 0.4436726795685343 0.5387254899964358 {NN|[MP]|[D{I|L}]|[EV]}AAGE{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}GAGE{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}AADA{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}AGAE{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}AGGE{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{NN|[MP]|[D{I|L}]|[EV]}AQE{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}QGE{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};[{I|L}A]DQE{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}GADA{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]};{[QN]|[E{I|L}]|[KN]}GGAE{I|L}{I|L}{NN|[MP]|[D{I|L}]|[EV]} 4.776;4.5444;4.3891;4.3739;4.3732;4.3241;4.202;4.1694;4.1575;4.1422 -;-;-;-;-;-;-;+;-;- + 1398 1 1.499 67542.2 0.4900000095367431 3389 5623 9012 SUDHL4_400M_050219_2,9014 SUDHL4_400M_050219_2,9014,ALDQEIIEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9016 50.109 260.0 209820.0 25 0 39196.0 + -1 IIDDVMKEL 9 78 546.2874845655971 1090.560416197994 2 546.2875244021416 MULTI CID FTMS 0 0 0 9015 224523.171875 1.0 0 0.0 1 Oxidation (M) _IIDDVM(Oxidation (M))KEL_ nc|ENSG00000101624|Q8TAP6-2|CEP76;ENSG00000101624|ENST00000262127|CEP76 26.268140514670165 0.1969607489560049 6 {I|L}{I|L}DDY 5 -1 52.524 0.0 0.0 4.8162 0.0 0.0 0.0 468.2470186822876 468.2470186822876 39.02880645020623 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3494850021680094 0.0 {I|L}{I|L}DDY 4.8162 - 71 + 1 1.499 46593.6 1.0 3390 5624 9015 SUDHL4_400M_050219_2,9016 SUDHL4_400M_050219_2,9016,IIDDVMKEL False False IIDDVMKEL 50.10894 546.287524402142 1177443.625 9015.0 nc|ENSG00000101624|Q8TAP6-2|CEP76;;ENSG00000101624|ENST00000262127|CEP76 4.510074933369954 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9017 50.12 648.0 172730.0 25 0 17506.0 + -1 RIFEKMFAM 9 106 602.7952617310474 1203.575970528895 2 602.7954589724541 MULTI CID FTMS 0 0 0 9015 192585.046875 0.7912670243086468 -2 0.0690650939941406 2 2 Oxidation (M) _RIFEKM(Oxidation (M))FAM(Oxidation (M))_ nc|ENSG00000123338|P55160-2|NCKAP1L;ENSG00000123338|ENST00000293373|NCKAP1L 36.506200033944 0.094635877243972 6 [R{I|L}]{M(Oxidation (M))|F}EK{M(Oxidation (M))|F}{M(Oxidation (M))|F}A{M(Oxidation (M))|F} 9 -1 + 66.82 0.0 0.0 5.5518 5.5518 90.026 0.0 0.0 0.0 16.222412206649466 43.51973176140042 16.222412206649466 18.239087409443187 0 1.424742501084005 1.0969100130080565 0.0 0.0 [R{I|L}]{M(Oxidation (M))|F}EK{M(Oxidation (M))|F}{M(Oxidation (M))|F}A{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}T[VG]{M(Oxidation (M))|F}{M(Oxidation (M))|F}A{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}EKA{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}{[QG]|[NA]}H[DN]A{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}EK{[YC]|[HE]}[MD];[R{I|L}]{M(Oxidation (M))|F}T[VG]A{{M(Oxidation (M))|F}{M(Oxidation (M))|F}|[YM]}{M(Oxidation (M))|F};[R{I|L}]{M(Oxidation (M))|F}TR{[YC]|[HE]}[MD];[R{I|L}]{M(Oxidation (M))|F}{[QG]|[NA]}H{[DS]|[MA]|[CV]|TT}[MN];[R{I|L}]{M(Oxidation (M))|F}T[VG]{[YC]|[HE]}[MD] 5.5518;4.0364;3.66;2.5453;2.3332;2.1446;1.5829;0.8411;0.81782 +;-;-;-;-;-;-;-;- + 559 1 1.499 81312.0 1.0 3391 5624 9015 SUDHL4_400M_050219_2,9017 SUDHL4_400M_050219_2,9017,RIFEKMFAM False False RIFEKMFAM 50.120239 602.795458972454 1212257.625 9015.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 7.639361063639323 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9019 50.128 280.0 333230.0 25 0 30901.0 + 44295 YLLPKDIKL 9 107 551.8474718430666 1101.6803907529331 2 551.8473998904228 MULTI CID FTMS 0 0 0 9018 165742.375 0.910998607073326 1 -0.069305419921875 1 Unmodified _YLLPKDIKL_ ENSG00000122035|ENST00000241463|RASL11A 51.41523569358685 0.0372669606867193 6 Y{I|L}{I|L}PKD{I|L}K{I|L} 9 0 + 88.124 0.0 0.0 7.999 7.999 97.868 0.0 0.0 0.0 56.23961968728824 12.98332479720628 12.98332479720628 56.3315822096376 0 1.5189301784845295 2.0 0.4247425010840047 0.2134679910804404 + + Y{I|L}{I|L}PKD{I|L}K{I|L};[KP]D{I|L}{I|L}Y{I|L}K{I|L};[Y{I|L}]{I|L}P{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}K{I|L};[KP]{I|L}D{I|L}Y{I|L}K{I|L};[K{I|L}]PD{I|L}Y{I|L}K{I|L} 7.999;2.8858;2.4123;1.9781;1.8647 +;-;-;-;- + 422 + 1 1.499 75065.4 1.0 3392 5625 9018 SUDHL4_400M_050219_2,9019 SUDHL4_400M_050219_2,9019,YLLPKDIKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9020 50.142 800.0 55731.0 25 0 2191.6 -1 0 87 600.5930985020914 1798.757466106474 3 600.5934326052666 MULTI CID FTMS 0 0 0 9018 64201.29296875 0.614531742315255 1 -0.069305419921875 2 6 [QA]HWS 5 -1 15.642 0.0 0.0 0.8696 0.0 0.0 0.0 1186.469538210243 1186.469538210243 -0.8289565120793441 0.0 -0.8289565120793441 0.0 0 0.8935078169319297 0.0 0.0 0.5 [QA]HWS 0.8696 - 50 1 1.499 40641.1 0.449999988079071 3393 5625 9018 SUDHL4_400M_050219_2,9020 SUDHL4_400M_050219_2,9020, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9021 50.152 554.0 110390.0 25 0 8457.4 + 20812 LLWEDGVTEA 10 97 566.7793409554648 1131.5441289777295 2 566.7795287966728 MULTI CID FTMS 0 0 0 9018 134168.03125 0.7739915174877788 -1 0.0186767578125 3 Unmodified _LLWEDGVTEA_ ENST00000452404.6_1_3:196666301-196669112:-|nuORF 52.268347100219714 0.0668375294751462 6 {I|L}{I|L}WEDGV 7 3 31.163 0.0 0.0 2.754 0.0 0.0 0.0 316.1144164135296 316.1144164135296 9.23495859973551 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 + {I|L}{I|L}WEDGV 2.754 + + 677 1 1.499 51034.9 1.0 3394 5625 9018 SUDHL4_400M_050219_2,9021 SUDHL4_400M_050219_2,9021,LLWEDGVTEA True True LLWEDGVTEA 50.151515 566.779528796673 1156087.625 9018.0 ENST00000452404.6_1_3:196666301-196669112:-|nuORF 6.163359006245931 2.0 True 10.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9022 50.162 592.0 225410.0 25 0 24160.0 + 31268 RLWGEPVNL 9 130 542.3009935679822 1082.5874342027644 2 542.3009521365166 MULTI CID FTMS 0 0 0 9018 100405.078125 0.1167530690644797 -3 0.0877418518066406 4 Unmodified _RLWGEPVNL_ ENSG00000114374|ENST00000338981|USP9Y;ENSG00000124486|ENST00000378308|USP9X;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;nc|ENSG00000114374|O00507-2|USP9Y;nc|ENSG00000124486|Q93008-3|USP9X 57.72198328787511 0.0273433238377839 6 [R{I|L}]WGEPVN{I|L} 9 0 + 63.197 0.0 0.0 5.8376 5.8376 79.258 0.0 0.0 0.0 1.4390657568428011 2.301594589017384 1.4390657568428011 1.4390657568428011 0 1.3494850021680094 0.0 0.0 0.6549471895720985 + + [R{I|L}]WGEPVN{I|L};{[VA]|[{I|L}G]}[WR]EPVN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}EPVN{I|L};[R{I|L}]WGEPVGG{I|L};{[VA]|[{I|L}G]}[WR]EPVGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[RE]|[WV]}EPVGG{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RK]EPVN{I|L};{[NV]|[RG]}[W{I|L}]EPVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[RK]EPVGG{I|L};{[NV]|[RG]}[W{I|L}]EPVGG{I|L} 5.8376;5.7047;5.617;4.987;4.8541;4.7664;4.6757;3.873;3.8252;3.0224 +;-;-;-;-;-;-;-;-;- + 1771 1 1.499 110429.9 1.0 3395 5625 9018 SUDHL4_400M_050219_2,9022 SUDHL4_400M_050219_2,9022,RLWGEPVNL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9023 50.176 800.0 97925.0 25 0 6252.9 -1 0 69 921.9364875424636 1841.858422151727 2 921.9359619021416 MULTI CID FTMS 0 0 0 9018 99524.125 0.8812702822549682 1 -0.069305419921875 5 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}A[HN]QDA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 90.333 0.0 0.0 4.9044 4.9044 56.896 0.0 0.0 0.0 7.447274948966935 16.690067809585756 7.447274948966935 0.0 0 0.8807196863200843 1.5228787452803376 0.4247425010840047 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}A[HN]QDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}A[HN]QDA{M(Oxidation (M))|F}YKV{I|L};[YQ]{M(Oxidation (M))|F}VA[HN]QDA{M(Oxidation (M))|F}YQV{I|L};[YQ]{M(Oxidation (M))|F}VA[HN]QDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}A[HN][AG]DA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}A[HN]QDA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}A[HN][AG]DA{M(Oxidation (M))|F}YQV{I|L};[Y{M(Oxidation (M))|F}]QVA[HN]QDA{M(Oxidation (M))|F}YKV{I|L};[Y{M(Oxidation (M))|F}]QVA[HN]QDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}A[HN]QW{M(Oxidation (M))|F}YKV{I|L} 4.9044;4.9044;4.5001;4.5001;4.4141;4.4141;4.4141;4.3367;4.3367;4.3106 -;-;-;-;-;-;-;-;-;- 1277 1 1.499 61099.0 0.4300000071525574 3396 5625 9018 SUDHL4_400M_050219_2,9023 SUDHL4_400M_050219_2,9023, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9024 50.19 800.0 100390.0 25 0 8102.2 + 44296 YLLPKDIKL 9 122 368.23411937811113 1101.6805287345337 3 368.2335082888603 MULTI CID FTMS 0 0 0 9018 93366.7265625 0.7368573799365403 2 -0.1630325317382812 6 Unmodified _YLLPKDIKL_ ENSG00000122035|ENST00000241463|RASL11A 16.149105407346934 0.3995459350917656 6 [Y{I|L}]{I|L}PK{NN|[MP]|[D{I|L}]|[EV]}K{I|L} 9 0 + 41.137 0.0 0.0 3.734 3.734 85.522 0.0 0.0 0.0 29.42979712652913 1.8842499412940583 1.8842499412940583 41.136759398218885 0 0.3054621874040891 2.0 0.0 0.0 + + [Y{I|L}]{I|L}PK{NN|[MP]|[D{I|L}]|[EV]}K{I|L} 3.734 + + 67 + 1 1.499 71433.2 0.9900000095367432 3397 5625 9018 SUDHL4_400M_050219_2,9024 SUDHL4_400M_050219_2,9024,YLLPKDIKL False True YLLPKDIKL 50.189535 368.23350828886 1695548.75 9018.0 ENSG00000122035|ENST00000241463|RASL11A 3.1223559180895486 3.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9026 50.195 71.0 906380.0 25 0 129630.0 + 33903 SLFPNSPKW 9 81 538.2822041722767 1074.5498554113533 2 538.2822143435478 MULTI CID FTMS 0 0 0 9025 729156.625 0.9304012530284976 1 -0.0937271118164062 1 Unmodified _SLFPNSPKW_ ENSG00000137673|ENST00000260227|MMP7;ENST00000531200.1_1_11:102398162-102401431:-|nuORF;ENST00000533366.5_1_11:102395628-102401431:-|nuORF 23.80106514851385 0.2283505500606397 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW 9 0 + 73.638 0.0 0.0 6.8529 6.8529 90.605 0.0 0.0 0.0 47.49404740203602 11.962724883926654 11.962724883926654 9.208187539523747 0 0.4247425010840047 2.0 0.0 0.3807196863200844 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}PNSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PGGSPKW;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[PG]SPKW 6.8529;5.996;5.7158 +;-;- + 223 + 1 1.499 53982.2 1.0 3398 5626 9025 SUDHL4_400M_050219_2,9026 SUDHL4_400M_050219_2,9026,SLFPNSPKW False True SLFPNSPKW 50.195087 538.282214343548 7435328.0 9025.0 ENST00000531200.1_1_11:102398162-102401431:-|nuORF;;ENST00000533366.5_1_11:102395628-102401431:-|nuORF;;ENSG00000137673|ENST00000260227|MMP7 8.245303471883139 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9027 50.2 245.0 163240.0 25 0 15733.0 + -1 FILGVPVMI 9 66 502.7974166855405 1003.580280437881 2 502.7979919314384 MULTI CID FTMS 0 0 0 9025 148699.5 0.2596167758918737 4 -0.2458648681640625 2 Oxidation (M) _FILGVPVM(Oxidation (M))I_ REV__ENSG00000160991|ENST00000495936|ORAI2 14.581692164780916 0.4419739649577144 6 {I|L}{[QN]|[E{I|L}]|[KN]} 3 -1 14.705 0.0 0.0 1.4653 0.0 0.0 630.3458251283572 0.0 630.3458251283572 0.0 2.715299873086609 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 {I|L}{[QN]|[E{I|L}]|[KN]} 1.4653 - 25 1 1.499 34962.8 1.0 3399 5626 9025 SUDHL4_400M_050219_2,9027 SUDHL4_400M_050219_2,9027,FILGVPVMI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9028 50.203 176.0 150180.0 25 0 23138.0 12740 GVNKNIFLK 9 48 516.813810666218 1031.613068399236 2 516.8136474490166 MULTI CID FTMS 0 0 0 9025 382633.96875 0.8331044005578756 -1 0.069305419921875 3 Unmodified _GVNKNIFLK_ ENSG00000106605|ENST00000265523|BLVRA 7.289230182591677 0.6602208344931196 6 Q{M(Oxidation (M))|F}[K{I|L}] 4 6 18.812 0.0 0.0 1.8236 0.0 0.0 497.2975941388688 0.0 497.2975941388688 0.0 11.822581265925436 0.0 0.0 0 0.5 0.0 0.0 0.0 Q{M(Oxidation (M))|F}[K{I|L}] 1.8236 - 14 1 1.499 25249.3 1.0 3400 5626 9025 SUDHL4_400M_050219_2,9028 SUDHL4_400M_050219_2,9028,GVNKNIFLK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9029 50.208 266.0 241270.0 25 0 44663.0 + 20051 LIQLEKKTF 9 77 560.340344096082 1118.666135258964 2 560.3402587771416 MULTI CID FTMS 0 0 0 9025 191736.828125 0.2555720704850879 -2 0.087982177734375 4 Unmodified _LIQLEKKTF_ REV__ENSG00000185774|ENST00000382152|KCNIP4;REV__nc|ENSG00000185774|Q6PIL6-2|KCNIP4;REV__nc|ENSG00000185774|Q6PIL6-3|KCNIP4;REV__nc|ENSG00000185774|Q6PIL6-4|KCNIP4;REV__nc|ENSG00000185774|Q6PIL6-5|KCNIP4 2.059750862983233 0.8427793054688888 6 {M(Oxidation (M))|F} 1 -1 12.218 0.0 0.0 1.0922 0.0 0.0 953.5866349921656 0.0 953.5866349921656 0.0 3.184110487935872 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 1.0922 + + 7 + 1 1.499 54386.9 1.0 3401 5626 9025 SUDHL4_400M_050219_2,9029 SUDHL4_400M_050219_2,9029,LIQLEKKTF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9030 50.219 601.0 224940.0 25 0 25272.0 + 44189 YLFERIKEL 9 106 605.8449427718662 1209.6753326105322 2 605.8454467654228 MULTI CID FTMS 0 0 0 9025 172101.765625 0.9760425241938986 -1 0.069305419921875 5 Unmodified _YLFERIKEL_ ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-2|TMEM209 80.89551112106177 0.0172997762405973 6 {I|L}Y{M(Oxidation (M))|F}ER{I|L}KE{I|L} 9 2 + 105.47 0.0 0.0 8.7191 8.7191 83.414 0.0 0.0 0.0 66.4646872391696 24.06727094955208 24.06727094955208 0.1722032235195314 0 2.473197507588033 2.0 1.892159058960253 0.6747425010840047 {I|L}Y{M(Oxidation (M))|F}ER{I|L}KE{I|L};{I|L}Y{M(Oxidation (M))|F}{I|L}{[RE]|[WV]}KE{I|L};Y{I|L}{M(Oxidation (M))|F}ER{I|L}KE{I|L};Y{I|L}{M(Oxidation (M))|F}{I|L}{[RE]|[WV]}KE{I|L};{I|L}Y{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}KE{I|L};Y{I|L}{I|L}{M(Oxidation (M))|F}{[RE]|[WV]}KE{I|L};[Y{I|L}]{M(Oxidation (M))|F}ER{I|L}KE{I|L};{I|L}{M(Oxidation (M))|F}YER{I|L}KE{I|L};{I|L}{M(Oxidation (M))|F}Y{I|L}{[RE]|[WV]}KE{I|L};{[QN]|[E{I|L}]|[KN]}KR{M(Oxidation (M))|F}{I|L}YE{I|L} 8.7191;8.7049;8.1825;8.1682;7.9546;7.418;6.0393;5.511;5.4968;4.5621 -;-;+;-;-;-;+;-;-;- + 553 + 1 1.499 102368.7 1.0 3402 5626 9025 SUDHL4_400M_050219_2,9030 SUDHL4_400M_050219_2,9030,YLFERIKEL True True YLFERIKEL 50.218537 605.845446765423 1163392.125 9025.0 ENSG00000146842|ENST00000397622|TMEM209;;nc|ENSG00000146842|Q96SK2-2|TMEM209 4.834655284881592 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9031 50.227 459.0 92291.0 25 0 9978.5 + 29538 QLNEQLVTL 9 75 529.2964701858691 1056.578387438538 2 529.2975341677666 MULTI CID FTMS 0 0 0 9025 171182.953125 1.0 0 0.0 6 Unmodified _QLNEQLVTL_ ENSG00000134987|ENST00000513710|WDR36;nc|ENSG00000134987|Q8NI36|WDR36 61.357469665136826 0.0253304979873734 6 {[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}Q{I|L}S{I|L}{I|L} 9 5 + 49.843 0.0 0.0 4.7174 4.7174 83.811 0.0 0.0 0.0 4.533248988790817 22.567978389287404 4.533248988790817 9.208187539523747 0 0.3182503180159344 0.0 0.7742275032520141 1.305462187404089 {[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}Q{I|L}S{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{I|L}Q{I|L}S{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}[AG]{I|L}S{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}QS{I|L}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{I|L}[AG]{I|L}S{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{I|L}QS{I|L}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}Q{I|L}[AG]S{I|L}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[AG]{I|L}[AG]S{I|L}{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}[KP][SG]{I|L}S{I|L}{I|L};{[TV]|[{I|L}S]}[HM][SG]{I|L}S{I|L}{I|L} 4.7174;3.8459;3.8459;3.7467;2.9785;2.8752;2.8752;2.0079;1.5775;1.2388 -;-;-;-;-;-;-;-;-;- 222 1 1.499 38097.9 1.0 3403 5626 9025 SUDHL4_400M_050219_2,9031 SUDHL4_400M_050219_2,9031,QLNEQLVTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9032 50.236 528.0 164710.0 25 0 25313.0 + -1 YLIKALTMEL 10 103 404.229119941646 0 404.2318908572197 PEAK CID FTMS 0 0 0 9025 144105.625 1.0 0 0.0 7 Oxidation (M) _YLIKALTM(Oxidation (M))EL_ REV__ENSG00000163312|ENST00000295488|HELQ 14.95716135407024 0.337208907547211 6 {I|L} 1 -1 6.9897 0.0 0.0 0.86673 0.0 0.0 558.2907766491139 132.04584680728752 690.3366234564014 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.86673 + + 32 + 1 1.499 72522.8 1.0 3404 5626 9025 SUDHL4_400M_050219_2,9032 SUDHL4_400M_050219_2,9032,YLIKALTMEL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9033 50.24 229.0 139510.0 25 0 14670.0 + -1 RLLDMGFEA 9 70 534.2631546930328 1066.5117564528657 2 534.2629882693291 MULTI CID FTMS 0 0 0 9025 136791.1875 1.0 0 0.0 8 Oxidation (M) _RLLDM(Oxidation (M))GFEA_ ENST00000539934.5_1_12:124093257-124102497:+|nuORF;ENSG00000111364|ENST00000238146|DDX55;ENST00000542286.5_1_12:124093257-124104017:+|nuORF 16.149105407346934 0.3995459350917656 6 {M(Oxidation (M))|F}G{M(Oxidation (M))|F}{[CP]|[EA]} 5 -1 22.263 0.0 0.0 2.0874 0.0 0.0 497.2975636212906 0.0 497.2975636212906 0.0 9.498599570275736 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 {M(Oxidation (M))|F}G{M(Oxidation (M))|F}{[CP]|[EA]} 2.0874 + + 36 1 1.499 31211.3 1.0 3405 5626 9025 SUDHL4_400M_050219_2,9033 SUDHL4_400M_050219_2,9033,RLLDMGFEA False False RLLDMGFEA 50.240278 534.262988269329 700625.8125 9025.0 ENST00000539934.5_1_12:124093257-124102497:+|nuORF;;ENSG00000111364|ENST00000238146|DDX55;;ENST00000542286.5_1_12:124093257-124104017:+|nuORF 3.798655430475871 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9034 50.254 800.0 105150.0 25 0 4673.7 -1 0 102 892.399068438926 1782.7835839446518 2 892.4015380740166 MULTI CID FTMS 0 0 0 9025 104083.9765625 1.0 0 0.0 9 6 [QA]HDEAQQNA[PA][YE]V{I|L} 16 -1 + 65.924 0.0 0.0 3.6978 3.6978 76.801 0.0 0.0 0.0 6.154017961346412 11.08857830256703 6.154017961346412 5.266836096133574 0 2.825257498915996 0.0 0.0 0.3494850021680094 [QA]HDEAQQNA[PA][YE]V{I|L};[QA]HDEAQQ[{I|L}V]WWC(Carbamidomethyl (C)){I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))R]{M(Oxidation (M))|F}ANQQAEC(Carbamidomethyl (C))C(Carbamidomethyl (C)){I|L};[QA]HDEAQHHYK{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[QA]HD{[{M(Oxidation (M))|F}D]|MM}NHHDHAQV{I|L};[QA]HD{[{M(Oxidation (M))|F}D]|MM}NHHC(Carbamidomethyl (C))YQV{I|L};[QA]HD{[{M(Oxidation (M))|F}D]|MM}NHHDHAKV{I|L};[QA]HD{[{M(Oxidation (M))|F}D]|MM}NHHC(Carbamidomethyl (C))YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[YC(Carbamidomethyl (C))]NHHDHAQV{I|L};[YQ]V[YC(Carbamidomethyl (C))]NHHDHAQV{I|L} 3.6978;3.4024;3.2839;3.201;3.0759;3.0383;2.6838;2.6462;2.2076;2.0989 -;-;-;-;-;-;-;-;-;- 1948 + 1 1.499 62451.6 0.449999988079071 3406 5626 9025 SUDHL4_400M_050219_2,9034 SUDHL4_400M_050219_2,9034, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9035 50.268 800.0 35862.0 25 0 3323.0 -1 0 48 595.9310849961074 0 595.9309570193291 PEAK CID FTMS 0 0 0 9025 92941.171875 1.0 0 0.0 10 6 A{[QN]|[E{I|L}]|[KN]}QAE 6 -1 16.031 0.0 0.0 1.3473 0.0 0.0 73.431333871125 472.1169222467407 545.5482561178657 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A{[QN]|[E{I|L}]|[KN]}QAE 1.3473 - 30 + 1 1.499 32482.9 0.4399999976158142 3407 5626 9025 SUDHL4_400M_050219_2,9035 SUDHL4_400M_050219_2,9035, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9036 50.283 800.0 28367.0 25 0 1195.8 -1 0 45 1174.8812068037028 3521.621791011308 3 1175.213549792767 MULTI CID FTMS 0 0 0 9025 131718.609375 1.0 0 0.0 11 6 V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 3 -1 8.9524 0.0 0.0 0.25421 0.0 0.0 3131.4325037572057 0.0 3131.4325037572057 0.0 1.962724883926656 0.0 0.0 0 0.0 0.0 0.0 0.0 V{[WS]|[C(Carbamidomethyl (C)){I|L}]} 0.25421 - 22 + 1 1.499 23370.2 0.4600000083446502 3408 5626 9025 SUDHL4_400M_050219_2,9036 SUDHL4_400M_050219_2,9036, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9038 50.288 6.1 7900900.0 25 0 444990.0 -1 0 61 881.4141671991518 0 881.4150268435478 PEAK CID FTMS 0 0 0 9037 8782371.0 0.5130092768860823 1 -0.0391578674316406 1 6 QY{M(Oxidation (M))|F}ANQQAE 9 -1 69.602 0.0 0.0 3.9528 0.0 0.0 230.1639534395161 448.1599520318969 678.323905471413 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 1.274227503252014 QY{M(Oxidation (M))|F}ANQQAE 3.9528 - 487 + 1 1.499 40142.6 1.0 3409 5627 9037 SUDHL4_400M_050219_2,9038 SUDHL4_400M_050219_2,9038, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9039 50.291 166.0 292660.0 25 0 43828.0 + 9310 FIFSDTHEL 9 70 554.7688375209393 1107.5231221086783 2 554.7693359255791 MULTI CID FTMS 0 0 0 9037 228575.765625 0.3140165207580607 2 -0.084320068359375 2 Unmodified _FIFSDTHEL_ ENSG00000102699|ENST00000381989|PARP4 25.399314129420983 0.2080152500878129 6 {[QV]|[N{I|L}]|[RA]|[KV]}E{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 9 6 + 33.355 0.0 0.0 3.0117 3.0117 70.766 0.0 0.0 0.0 7.6760624017703165 0.2169774367841626 0.2169774367841626 1.47817481888638 0 0.4247425010840047 1.3979400086720375 0.8807196863200843 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}E{[QC]|[C(Carbamidomethyl (C))A]}{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[QV]|[N{I|L}]|[RA]|[KV]}EAADS{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[QV]|[N{I|L}]|[RA]|[KV]}EV[MN]{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[QV]|[N{I|L}]|[RA]|[KV]}[RD]DS{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]};{[QV]|[N{I|L}]|[RA]|[KV]}E{[QC]|[C(Carbamidomethyl (C))A]}E{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QV]|[N{I|L}]|[RA]|[KV]}EAADC{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QV]|[N{I|L}]|[RA]|[KV]}[RD]DC{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[HT]EDS{M(Oxidation (M))|F}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YC]|[HE]}TDS{M(Oxidation (M))|F}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[HT]E[YG]{I|L}{M(Oxidation (M))|F}{[QN]|[E{I|L}]|[KN]} 3.0117;2.8782;2.7192;2.5602;2.4692;2.3357;2.0177;2.0177;1.9302;1.8623 -;-;-;-;-;-;-;-;-;- 356 1 1.499 45044.4 1.0 3410 5627 9037 SUDHL4_400M_050219_2,9039 SUDHL4_400M_050219_2,9039,FIFSDTHEL False True FIFSDTHEL 50.291336 554.769335925579 8278974.5 9037.0 ENSG00000102699|ENST00000381989|PARP4 6.418520609537761 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9040 50.293 96.0 490010.0 25 0 43020.0 -1 MCMIRYWMMKL 11 55 781.8645195672516 1561.714486201303 2 782.3656494021416 MULTI CID FTMS 0 0 0 9037 446837.3125 0.8216614430258448 -3 0.1817092895507812 3 Carbamidomethyl (C) _MC(Carbamidomethyl (C))MIRYWMMKL_ ENST00000285968.10_1_7:135303322-135304201:+|nuORF 3.2813086475875832 0.8596665074481906 6 {M(Oxidation (M))|F}ANQ[CS]C(Carbamidomethyl (C))V{I|L} 9 -1 38.867 0.0 0.0 2.4887 0.0 0.0 521.2872428623444 0.0 521.2872428623444 0.0 27.027092291605065 0.0 0.0 0 0.0 0.0 0.0 0.805462187404089 {M(Oxidation (M))|F}ANQ[CS]C(Carbamidomethyl (C))V{I|L} 2.4887 - 374 + 1 1.499 39630.5 1.0 3411 5627 9037 SUDHL4_400M_050219_2,9040 SUDHL4_400M_050219_2,9040,MCMIRYWMMKL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9041 50.297 182.0 328660.0 25 0 55182.0 -1 KMRKLFKGI 9 74 568.8534200571444 1135.692287181089 2 568.8536865115166 MULTI CID FTMS 0 0 0 9037 326820.53125 0.9497833252188704 -1 0.0937271118164062 4 Oxidation (M) _KM(Oxidation (M))RKLFKGI_ ENST00000559305.5_1_15:59191033-59209159:-|nuORF 2.059750862983233 0.8427793054688888 6 W{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 3 -1 13.512 0.0 0.0 1.1898 0.0 0.0 674.4799286379231 0.0 674.4799286379231 0.0 2.798859261803985 0.0 0.0 0 0.0 0.0 0.0 0.3054621874040891 W{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 1.1898 - 19 + 1 1.499 51038.4 1.0 3412 5627 9037 SUDHL4_400M_050219_2,9041 SUDHL4_400M_050219_2,9041,KMRKLFKGI False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9042 50.303 338.0 216270.0 25 0 18911.0 + 31271 RLWNETVEL 9 77 580.3081867888096 1158.6018206444191 2 580.3087036013603 MULTI CID FTMS 0 0 0 9037 199649.71875 0.5829650027972103 -2 0.1630325317382812 5 Unmodified _RLWNETVEL_ ENSG00000035499|ENST00000265036|DEPDC1B;nc|ENSG00000035499|Q8WUY9-2|DEPDC1B 38.17557092003332 0.0854718145212029 6 NETVE{I|L} 6 3 56.191 0.0 0.0 4.8499 0.0 0.0 455.265428611525 0.0 455.265428611525 0.0 39.87965367563433 0.0 0.0 0 0.9247425010840048 0.0 0.5 0.3807196863200844 + NETVE{I|L} 4.8499 + + 309 1 1.499 62086.0 1.0 3413 5627 9037 SUDHL4_400M_050219_2,9042 SUDHL4_400M_050219_2,9042,RLWNETVEL True True RLWNETVEL 50.303113 580.30870360136 1715974.25 9037.0 nc|ENSG00000035499|Q8WUY9-2|DEPDC1B;;ENSG00000035499|ENST00000265036|DEPDC1B 5.906530539194743 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9043 50.31 372.0 295360.0 25 0 30325.0 + 25929 NLLPKLHIV 9 106 523.8397291329834 1045.6649053327667 2 523.8398925662041 MULTI CID FTMS 0 0 0 9037 174545.765625 0.3031740086030208 -5 0.2507743835449219 6 Unmodified _NLLPKLHIV_ ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1 64.23631603340823 0.0237365939569086 6 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V 9 0 + 60.613 0.0 0.0 5.7966 5.7966 80.583 0.0 0.0 0.0 18.45055529366246 2.3888208891513685 2.3888208891513685 2.3888208891513685 0 1.7302046884880935 2.0 0.0 0.0 + + {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}HV{I|L};[H{I|L}]{I|L}KP{I|L}N{I|L}V;[H{I|L}][KP]{I|L}{I|L}N{I|L}V;[H{I|L}]{I|L}KPVQ{I|L}V;[H{I|L}][KP]{I|L}VQ{I|L}V;[H{I|L}]{I|L}KP{I|L}GG{I|L}V;[H{I|L}][KP]{I|L}{I|L}GG{I|L}V;[KP]{I|L}H{I|L}{I|L}N{I|L}V;[H{I|L}]{I|L}KPV[AG]{I|L}V 5.7966;5.5681;3.4723;3.3797;3.1844;3.0918;2.5917;2.499;2.3593;2.3038 +;-;-;-;-;-;-;-;-;- + 488 + 1 1.499 89401.3 1.0 3414 5627 9037 SUDHL4_400M_050219_2,9043 SUDHL4_400M_050219_2,9043,NLLPKLHIV True True NLLPKLHIV 50.309811 523.839892566204 7556793.5 9037.0 ENSG00000169504|ENST00000374379|CLIC4;;ENSG00000213719|ENST00000375784|CLIC1 5.836126327514648 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9044 50.322 728.0 100860.0 25 0 9280.3 + 29472 QLIPALAKV 9 103 476.813016968571 951.611481003942 2 476.8131286501884 MULTI CID FTMS 0 0 0 9037 102165.6640625 0.9877407112890566 -1 0.0937271118164062 7 Unmodified _QLIPALAKV_ ENSG00000064655|ENST00000327619|EYA2;ENSG00000104313|ENST00000340726|EYA1;ENSG00000112319|ENST00000355286|EYA4;ENST00000496494.5_1_8:72111577-72234167:-|nuORF;nc|ENSG00000064655|O00167-2|EYA2;nc|ENSG00000104313|Q99502-2|EYA1;nc|ENSG00000104313|Q99502-3|EYA1;nc|ENSG00000112319|O95677-2|EYA4;nc|ENSG00000112319|O95677-4|EYA4;nc|ENSG00000112319|O95677-5|EYA4 52.268347100219714 0.0353964759249114 6 [Q{I|L}]{I|L}PA{I|L}AKV 9 0 + 49.325 0.0 0.0 5.1833 5.1833 84.088 0.0 0.0 0.0 9.346980859148324 8.928643424857874 8.928643424857874 8.928643424857874 0 0.805462187404089 2.0 0.0 0.2396518287104437 + + [Q{I|L}]{I|L}PA{I|L}AKV;[Q{I|L}]{I|L}PA{I|L}[KG]{I|L} 5.1833;4.2451 +;- + 130 + 1 1.499 61934.1 1.0 3415 5627 9037 SUDHL4_400M_050219_2,9044 SUDHL4_400M_050219_2,9044,QLIPALAKV True True QLIPALAKV 50.322422 476.813128650188 920340.8125 9037.0 nc|ENSG00000112319|O95677-4|EYA4;;ENST00000496494.5_1_8:72111577-72234167:-|nuORF;;ENSG00000112319|ENST00000355286|EYA4;;nc|ENSG00000104313|Q99502-3|EYA1;;nc|ENSG00000104313|Q99502-2|EYA1;;nc|ENSG00000064655|O00167-2|EYA2;;nc|ENSG00000112319|O95677-2|EYA4;;ENSG00000064655|ENST00000327619|EYA2;;nc|ENSG00000112319|O95677-5|EYA4;;ENSG00000104313|ENST00000340726|EYA1 6.328127384185791 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9046 50.328 155.0 310020.0 25 0 32601.0 + 33746 SLAGDVALQQL 11 80 557.8086638549332 1113.6027747766664 2 557.8088256716728 MULTI CID FTMS 0 0 0 9045 347922.9375 0.2827286165027784 2 -0.1129798889160156 1 Unmodified _SLAGDVALQQL_ ENSG00000010292|ENST00000315579|NCAPD2 71.92227651296345 0.0268337859456942 6 {[TV]|[{I|L}S]}NEVA 6 7 37.814 0.0 0.0 3.3957 0.0 0.0 0.0 497.2727326226226 497.2727326226226 12.42029978953341 0.0 0.0 0.0 0 0.0 2.0 1.424742501084005 0.0 {[TV]|[{I|L}S]}NEVA 3.3957 - 678 1 1.499 42373.8 1.0 3416 5628 9045 SUDHL4_400M_050219_2,9046 SUDHL4_400M_050219_2,9046,SLAGDVALQQL True True SLAGDVALQQL 50.328049 557.808825671673 12501341.0 9045.0 ENSG00000010292|ENST00000315579|NCAPD2 6.106239795684815 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9047 50.333 241.0 236480.0 25 0 11799.0 -1 0 69 845.8933835264178 1689.7722141196357 2 845.8946411013603 MULTI CID FTMS 0 0 0 9045 221847.3125 0.3761159454811764 2 -0.1129798889160156 2 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQNA{M(Oxidation (M))|F}Y 11 -1 89.461 0.0 0.0 5.2943 0.0 0.0 0.0 355.2004690459645 355.2004690459645 43.70287887072842 0.0 0.0 0.0 0 0.3807196863200844 1.3010299956639813 1.416386562212267 2.853917193908117 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QQNA{M(Oxidation (M))|F}Y 5.2943 - 1461 1 1.499 46206.9 1.0 3417 5628 9045 SUDHL4_400M_050219_2,9047 SUDHL4_400M_050219_2,9047, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9048 50.34 412.0 161080.0 25 0 16558.0 + 40533 VIWGTDVNV 9 105 501.76631260830254 1001.5180722834052 2 501.7667724490166 MULTI CID FTMS 0 0 0 9045 124612.1796875 0.0595421719910131 -4 0.2208671569824218 3 Unmodified _VIWGTDVNV_ ENSG00000104738|ENST00000649973|MCM4 32.116972079565 0.1225432171549407 6 [DV][MN]V{I|L} 6 6 26.973 0.0 0.0 2.6932 0.0 0.0 0.0 327.16721714108013 327.16721714108013 10.82895651207934 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.7614393726401688 0.3494850021680094 [DV][MN]V{I|L} 2.6932 - 337 1 1.499 53062.4 1.0 3418 5628 9045 SUDHL4_400M_050219_2,9048 SUDHL4_400M_050219_2,9048,VIWGTDVNV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9049 50.354 800.0 77813.0 25 0 4089.9 + -1 SGVEVLVSV 9 83 887.4116948736543 1772.8088368141084 2 888.9214965701103 MULTI CID FTMS 0 0 0 9045 96131.453125 0.6714910291240773 -3 0.2021903991699218 4 ENSG00000198695|ENST00000361681|MT-ND6 6 {[QD]|[EN]|[WG]|[KD]|[RS]}EV{I|L}V 6 -1 40.481 0.0 0.0 2.2835 0.0 0.0 0.0 1086.4010969061585 1086.4010969061585 18.055526465768 0.0 0.0 0.0 0 0.4247425010840047 0.0 1.7104093769761874 0.0 {[QD]|[EN]|[WG]|[KD]|[RS]}EV{I|L}V 2.2835 - 515 1 1.499 49744.2 0.4099999964237213 3419 5628 9045 SUDHL4_400M_050219_2,9049 SUDHL4_400M_050219_2,9049, False False SGVEVLVSV 50.353767 888.4205 642817.3125 9045.0 ENSG00000198695|ENST00000361681|MT-ND6 1.880833864212036 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9050 50.368 800.0 98024.0 25 0 10327.0 + -1 AMIKGLQVL 9 128 494.7967819912813 987.5790110493624 2 494.7966491580009 MULTI CID FTMS 0 0 0 9045 84859.0546875 0.9840172242619232 -1 0.0391578674316406 5 Oxidation (M) _AM(Oxidation (M))IKGLQVL_ nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1 30.22481116460888 0.1466181017706357 6 {[VA]|[{I|L}G]}QK{I|L}{[MS]|[{M(Oxidation (M))|F}A]}V{I|L} 9 -1 + 24.495 0.0 0.0 2.4803 2.4803 71.248 0.0 0.0 0.0 1.5360725108442423 11.518725752876698 1.5360725108442423 2.218487496163561 0 0.8182503180159344 0.6777807052660807 0.3494850021680094 0.75 {[VA]|[{I|L}G]}QK{I|L}{[MS]|[{M(Oxidation (M))|F}A]}V{I|L};{[VA]|[{I|L}G]}QKV[MT]V{I|L};{[VA]|[{I|L}G]}[AG]K{I|L}{[MS]|[{M(Oxidation (M))|F}A]}V{I|L};[KA]{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}V{I|L};{[VA]|[{I|L}G]}[AG]KV[MT]V{I|L};[KA]{[QV]|[N{I|L}]|[RA]|[KV]}V[MT]V{I|L};[K{I|L}]{[QG]|[NA]}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}V{I|L};[K{I|L}]{[QG]|[NA]}V[MT]V{I|L};{[VA]|[{I|L}G]}QK{I|L}[PG][Y{I|L}];{[VA]|[{I|L}G]}QKV[PA][Y{I|L}] 2.4803;2.2557;1.5479;1.4375;1.3233;1.2128;1.1948;0.97015;0.96852;0.74389 -;-;-;-;-;-;-;-;-;- 269 1 1.499 63420.4 0.8500000238418579 3420 5628 9045 SUDHL4_400M_050219_2,9050 SUDHL4_400M_050219_2,9050,AMIKGLQVL False False AMIKGLQVL 50.367582 494.796649158001 487649.71875 9045.0 nc|ENSG00000055163|Q96F07|CYFIP2;;ENSG00000055163|ENST00000620254|CYFIP2;;ENSG00000273749|ENST00000617928|CYFIP1 3.870553970336914 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9052 50.385 800.0 65133.0 25 0 14472.0 30196 QVVHKNTRFLR 11 69 699.4082512844325 1396.8019496356649 2 699.4093505740166 MULTI CID FTMS 0 0 0 9051 71135.265625 0.2067800534734535 8 -0.3274002075195312 1 Unmodified _QVVHKNTRFLR_ ENSG00000100056|ENST00000252137|ESS2;ENST00000472073.1_1_22:19121711-19131632:-|nuORF 1.1933415558491238 0.8695176722560516 6 Q 1 10 3.0989 0.0 0.0 0.22186 0.0 0.0 569.4284277624212 696.2863863580686 1265.7148141204898 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Q 0.22186 + + 5 + 1 1.499 48174.3 0.449999988079071 3421 5629 9051 SUDHL4_400M_050219_2,9052 SUDHL4_400M_050219_2,9052,QVVHKNTRFLR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9053 50.39 237.0 326130.0 25 0 42737.0 + 16977 KIVDLLKNL 9 111 528.344921720664 1054.675290508128 2 528.3448364138603 MULTI CID FTMS 0 0 0 9051 175907.875 0.3407987694789762 -2 0.084320068359375 2 Unmodified _KIVDLLKNL_ ENSG00000188488|ENST00000329597|SERPINA5;ENST00000556730.1_1_14:95047745-95056676:+|nuORF 81.9152076656658 0.0170527153246128 6 {I|L}D{I|L}{I|L}KN{I|L} 7 2 50.53 0.0 0.0 4.791 0.0 0.0 227.16362975989813 0.0 227.16362975989813 0.0 30.788245576287267 0.0 0.0 0 2.0858317385287872 0.0 0.3252574989159953 1.6989700043360187 {I|L}D{I|L}{I|L}KN{I|L} 4.791 - 1465 + 1 1.499 67507.9 1.0 3422 5629 9051 SUDHL4_400M_050219_2,9053 SUDHL4_400M_050219_2,9053,KIVDLLKNL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9054 50.396 339.0 148060.0 25 0 14621.0 + 25888 NLINEINGV 9 87 493.26876202005377 984.5229711069076 2 493.2689086794853 MULTI CID FTMS 0 0 0 9051 165888.09375 1.0 0 0.0 3 Unmodified _NLINEINGV_ ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-2|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;nc|ENSG00000075151|O43432|EIF4G3 34.10243960390752 0.1078313939113124 6 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}T 4 6 36.727 0.0 0.0 3.7304 0.0 0.0 0.0 540.2405363747388 540.2405363747388 21.1231836236621 0.0 0.0 0.0 0 0.0 2.0 0.0 0.6549471895720985 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}T 3.7304 - 128 1 1.499 43669.9 1.0 3423 5629 9051 SUDHL4_400M_050219_2,9054 SUDHL4_400M_050219_2,9054,NLINEINGV True True NLINEINGV 50.395873 493.268908679485 681557.0625 9051.0 nc|ENSG00000075151|O43432|EIF4G3;;nc|ENSG00000075151|O43432-3|EIF4G3;;ENSG00000075151|ENST00000602326|EIF4G3;;nc|ENSG00000075151|O43432-2|EIF4G3 5.489033460617065 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9055 50.401 293.0 234000.0 25 0 25138.0 + 40623 VLDDKDYFL 9 91 564.2843735038899 1126.5541940745798 2 564.2846557497978 MULTI CID FTMS 0 0 0 9051 156703.609375 0.3893922184385362 -2 0.084320068359375 4 Unmodified _VLDDKDYFL_ ENSG00000115541|ENST00000233893|HSPE1;ENST00000465573.1_1_2:198365552-198367980:+|nuORF;ENST00000550617.1_1_12:102267096-102267252:-|nuORF 39.94969957227396 0.0757326808254658 6 [{I|L}V]DNV{I|L}DDQP 10 6 + 73.229 0.0 0.0 6.5003 6.5003 89.003 0.0 0.0 0.0 50.8309547518838 9.75390988664909 9.75390988664909 9.164539485499262 0 0.4247425010840047 2.0 1.610924374808178 0.0 [{I|L}V]DNV{I|L}DDQP;[{I|L}V]DNV{I|L}DD[AG]P;[{I|L}V]DGGV{I|L}DDQP;[{I|L}V]DNVD{I|L}DQP;[{I|L}V]DNDV{I|L}DQP;[{I|L}V]DGGV{I|L}DD[AG]P;[{I|L}V]DNVD{I|L}D[AG]P;[{I|L}V]DGGVD{I|L}DQP;[{I|L}V]DGGDV{I|L}DQP;[{I|L}V]DNDV{I|L}D[AG]P 6.5003;5.6868;5.6868;5.5028;5.2356;4.8765;4.6893;4.6893;4.4221;4.4221 -;-;-;-;-;-;-;-;-;- 433 + 1 1.499 60296.5 1.0 3424 5629 9051 SUDHL4_400M_050219_2,9055 SUDHL4_400M_050219_2,9055,VLDDKDYFL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9056 50.408 359.0 132130.0 25 0 14829.0 + 34257 SLQETIQSL 9 78 509.7741950439096 1017.5338371546192 2 509.7745239138603 MULTI CID FTMS 0 0 0 9051 152380.078125 1.0 0 0.0 5 Unmodified _SLQETIQSL_ ENSG00000119777|ENST00000238788|TMEM214;nc|ENSG00000119777|Q6NUQ4-2|TMEM214 39.94969957227396 0.0757326808254658 6 {[TV]|[{I|L}S]}QET 5 4 46.809 0.0 0.0 4.6002 0.0 0.0 0.0 456.2457871880754 456.2457871880754 17.706440023076766 0.0 0.0 0.0 0 0.0 2.0 0.8252574989159953 0.3494850021680094 + {[TV]|[{I|L}S]}QET 4.6002 + + 280 1 1.499 44125.5 1.0 3425 5629 9051 SUDHL4_400M_050219_2,9056 SUDHL4_400M_050219_2,9056,SLQETIQSL True True SLQETIQSL 50.407738 509.77452391386 652728.6875 9051.0 ENSG00000119777|ENST00000238788|TMEM214;;nc|ENSG00000119777|Q6NUQ4-2|TMEM214 5.332225322723389 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9057 50.422 800.0 242160.0 25 0 13697.0 -1 0 112 915.9356718379184 1829.8567907426368 2 915.9362060427666 MULTI CID FTMS 0 0 0 9051 134737.484375 0.6608663057621338 -1 0.0451622009277343 6 6 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQDA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 130.29 0.0 0.0 7.1204 7.1204 63.702 0.0 0.0 0.0 14.247425010840049 10.35988337447489 10.35988337447489 0.0 0 1.559894379144197 1.6989700043360187 1.1307196863200843 1.7346368802282015 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEP[KC]QDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEP[KC]QDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]DA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]DA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQDA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQW{M(Oxidation (M))|F}YQV{I|L} 7.1204;7.1204;6.6569;6.6569;6.6269;6.6269;6.6269;6.6269;6.6269;6.5468 -;-;-;-;-;-;-;-;-;- 19028 1 1.499 128086.2 0.5 3426 5629 9051 SUDHL4_400M_050219_2,9057 SUDHL4_400M_050219_2,9057, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9058 50.435 800.0 188190.0 25 0 22895.0 + -1 LSAHAEMW 8 104 480.7151382021423 959.4157234710846 2 480.7151061892509 MULTI CID FTMS 0 0 0 9051 112734.7109375 0.8608045080012823 -1 0.0451622009277343 7 Oxidation (M) _LSAHAEM(Oxidation (M))W_ REV__ENST00000481314.5_1_3:121363541-121379717:-|nuORF 5.760428011301431 0.7893668129297577 6 V 1 -1 12.218 0.0 0.0 1.2735 0.0 0.0 842.3363757921768 0.0 842.3363757921768 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 1.2735 - 26 + 1 1.499 125361.4 0.4600000083446502 3427 5629 9051 SUDHL4_400M_050219_2,9058 SUDHL4_400M_050219_2,9058,LSAHAEMW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9060 50.441 78.0 608730.0 25 0 69202.0 + 31269 RLWGEPVNL 9 73 542.3009935679822 1082.5874342027644 2 542.3010131716728 MULTI CID FTMS 0 0 0 9059 631988.5625 0.7348891675943188 2 -0.0943756103515625 1 Unmodified _RLWGEPVNL_ ENSG00000114374|ENST00000338981|USP9Y;ENSG00000124486|ENST00000378308|USP9X;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;nc|ENSG00000114374|O00507-2|USP9Y;nc|ENSG00000124486|Q93008-3|USP9X 41.95555342248728 0.0647214845423414 6 [R{I|L}]WGEPVN{I|L} 9 0 + 58.109 0.0 0.0 5.3676 5.3676 86.232 0.0 0.0 0.0 3.65279269351241 35.713337517843655 3.65279269351241 9.208187539523747 0 1.3494850021680094 0.0 0.0 0.0 + + [R{I|L}]WGEPVN{I|L};[R{I|L}]WGEPVGG{I|L} 5.3676;4.517 +;- + 198 1 1.499 43672.3 1.0 3428 5630 9059 SUDHL4_400M_050219_2,9060 SUDHL4_400M_050219_2,9060,RLWGEPVNL True True RLWGEPVNL 50.441073 542.301013171673 12017634.0 9059.0 nc|ENSG00000124486|Q93008-3|USP9X;;ENSG00000114374|ENST00000338981|USP9Y;;ENSG00000124486|ENST00000378308|USP9X;;nc|ENSG00000114374|O00507-2|USP9Y;;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF 7.646792729695638 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9061 50.455 800.0 62152.0 25 0 19354.0 43385 WQKLIVWKFPP 11 70 721.4214893910391 1440.8284258488782 2 721.4228393435478 MULTI CID FTMS 0 0 0 9059 144683.4375 0.6981728394242581 -5 0.3151702880859375 2 Unmodified _WQKLIVWKFPP_ ENSG00000086827|ENST00000200135|ZW10;nc|ENSG00000086827|O43264-2|ZW10 0.3506318815782774 0.8734936314171269 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.499 47400.1 0.4000000059604645 3429 5630 9059 SUDHL4_400M_050219_2,9061 SUDHL4_400M_050219_2,9061,WQKLIVWKFPP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9062 50.457 110.0 457850.0 25 0 84741.0 + 33943 SLHDAIMIV 9 65 507.76807393187966 1013.5215949305592 2 507.7682372927666 MULTI CID FTMS 0 0 0 9059 478306.25 0.4365210375886429 -6 0.3338470458984375 3 Oxidation (M) _SLHDAIM(Oxidation (M))IV_ ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 42.09456458481378 0.0639583784996157 6 DA{I|L}{M(Oxidation (M))|F}{I|L}V 6 3 37.268 0.0 0.0 3.6771 0.0 0.0 337.17390639472814 0.0 337.17390639472814 0.0 22.663800089887545 0.0 0.0 0 0.7742275032520141 0.0 0.3494850021680094 0.0 + DA{I|L}{M(Oxidation (M))|F}{I|L}V 3.6771 + + 207 1 1.499 46066.8 1.0 3430 5630 9059 SUDHL4_400M_050219_2,9062 SUDHL4_400M_050219_2,9062,SLHDAIMIV True False SLHDAIMIV 50.45721 507.768237292767 13300370.0 9059.0 nc|ENSG00000135624|Q99832-2|CCT7;;nc|ENSG00000135624|Q99832-4|CCT7;;ENSG00000135624|ENST00000258091|CCT7;;nc|ENSG00000135624|Q99832-3|CCT7 8.236124038696289 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9063 50.462 260.0 240450.0 25 0 26698.0 44067 YISDFHSSYSL 11 76 659.7989838381895 1317.583414743179 2 659.7988769412041 MULTI CID FTMS 0 0 0 9059 233787.453125 0.8349126986394443 -1 0.0678176879882812 4 Unmodified _YISDFHSSYSL_ ENST00000353487.6_1_12:121248617-121341650:-|nuORF 13.042465956692816 0.7638483625850725 6 Y{I|L}{M(Oxidation (M))|F}D 4 8 49.909 0.0 0.0 3.7879 0.0 0.0 0.0 776.3162935846311 776.3162935846311 36.81031895404267 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 Y{I|L}{M(Oxidation (M))|F}D 3.7879 - 60 + 1 1.499 50341.7 1.0 3431 5630 9059 SUDHL4_400M_050219_2,9063 SUDHL4_400M_050219_2,9063,YISDFHSSYSL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9064 50.468 334.0 142390.0 25 0 13581.0 + -1 VLMTEDIKL 9 80 539.296008191403 1076.5774634496058 2 539.2980834841728 MULTI CID FTMS 0 0 0 9059 120314.359375 0.2748240831831817 -5 0.3151702880859375 5 Oxidation (M) _VLM(Oxidation (M))TEDIKL_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1 36.506200033944 0.094635877243972 6 V{I|L}{M(Oxidation (M))|F}TED{I|L}K{I|L} 9 -1 + 85.866 0.0 0.0 7.9758 7.9758 97.964 0.0 0.0 0.0 60.45944473613847 10.908458057352178 10.908458057352178 62.90221594415689 0 0.7614393726401688 2.0 0.3807196863200844 0.0 V{I|L}{M(Oxidation (M))|F}TED{I|L}K{I|L};[Y{I|L}][PS]ED{I|L}K{I|L} 7.9758;2.133 +;- + 142 + 1 1.499 44512.3 1.0 3432 5630 9059 SUDHL4_400M_050219_2,9064 SUDHL4_400M_050219_2,9064,VLMTEDIKL False False VLMTEDIKL 50.468121 539.298083484173 4994048.5 9059.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 8.730936050415039 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9065 50.478 539.0 118380.0 25 0 8348.7 + 34246 SLPVVLSASP 10 106 485.2843664678057 968.5541800024114 2 485.2841064333916 MULTI CID FTMS 0 0 0 9059 111964.6328125 0.9510626053410912 -2 0.1129798889160156 6 Unmodified _SLPVVLSASP_ REV__ENST00000360066.6_2_1:205500762-205501083:+|nuORF 32.30548876998284 0.2428506522065767 6 {[TV]|[{I|L}S]}PVNE 6 -1 37.997 0.0 0.0 3.9231 0.0 0.0 0.0 326.2093673405552 326.2093673405552 23.39313406732211 0.0 0.0 0.0 0 0.0 0.9208187539523752 0.9698565171985376 0.7742275032520141 {[TV]|[{I|L}S]}PVNE 3.9231 - 236 1 1.499 56571.7 1.0 3433 5630 9059 SUDHL4_400M_050219_2,9065 SUDHL4_400M_050219_2,9065,SLPVVLSASP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9066 50.491 800.0 101670.0 25 0 25779.0 9405 FKDHIVLTVLP 11 64 641.3845795815052 1280.7546062298104 2 641.3846313357353 MULTI CID FTMS 0 0 0 9059 107531.671875 0.652399844645645 -2 0.1129798889160156 7 Unmodified _FKDHIVLTVLP_ ENSG00000170854|ENST00000394198|RIOX2;nc|ENSG00000170854|Q8IUF8-3|RIOX2;nc|ENSG00000170854|Q8IUF8-4|RIOX2 2.9952420565917617 0.861016188266951 6 T 1 10 1.1092 0.0 0.0 0.086609 0.0 0.0 657.4371756651605 519.2466524713499 1176.6838281365103 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + T 0.086609 + + 1 + 1 1.499 68160.9 0.4600000083446502 3434 5630 9059 SUDHL4_400M_050219_2,9066 SUDHL4_400M_050219_2,9066,FKDHIVLTVLP False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9067 50.504 714.0 111990.0 25 0 8110.9 -1 0 81 951.458186777672 1900.901820622144 2 951.962451159954 MULTI CID FTMS 0 0 0 9059 98298.921875 1.0 0 0.0 8 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQNA{M(Oxidation (M))|F}YQV{I|L} 16 -1 + 98.023 0.0 0.0 5.1567 5.1567 57.799 0.0 0.0 0.0 9.208187539523747 9.846821098145568 9.208187539523747 0.0 0 1.3935078169319297 1.3979400086720375 0.0 1.610924374808178 {[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQ[AG]NA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EA[AG]QNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EA[AG]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[NS]EAQQGGA{M(Oxidation (M))|F}YKV{I|L};[YQ]V[NS]EAQQNA{M(Oxidation (M))|F}YQV{I|L} 5.1567;5.1567;4.6825;4.6825;4.6825;4.6825;4.6825;4.6825;4.6825;4.6723 -;-;-;-;-;-;-;-;-;- 1545 1 1.499 55890.8 1.0 3435 5630 9059 SUDHL4_400M_050219_2,9067 SUDHL4_400M_050219_2,9067, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9068 50.518 800.0 173780.0 25 0 44530.0 -1 0 97 902.4178970903764 1802.8212412475525 2 902.421435534954 MULTI CID FTMS 0 0 0 9059 80901.21875 1.0 0 0.0 9 6 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F}Y 12 -1 107.14 0.0 0.0 5.9428 0.0 0.0 0.0 355.19962865666724 355.19962865666724 82.98123137749307 0.0 0.0 0.0 0 0.6549471895720984 1.3010299956639813 1.610924374808178 1.4916440611282626 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F}Y 5.9428 - 3591 1 1.499 95768.4 0.4000000059604645 3436 5630 9059 SUDHL4_400M_050219_2,9068 SUDHL4_400M_050219_2,9068, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9070 50.525 185.0 277210.0 25 0 39871.0 17957 KRDIRRLY 8 71 560.340344096082 1118.666135258964 2 560.3401367068291 MULTI CID FTMS 0 0 0 9069 256384.75 0.3417433261990948 3 -0.1075592041015625 1 Unmodified _KRDIRRLY_ ENSG00000115526|ENST00000264249|CHST10 4.75600775471527 0.7954636275367004 6 [RK]{I|L}DRRY{I|L} 8 4 + 18.594 0.0 0.0 1.6621 1.6621 78.559 0.0 0.0 0.0 6.999868935529751 5.406075122407689 5.406075122407689 9.262137858390814 0 0.0 0.0 0.0 0.0 [RK]{I|L}DRRY{I|L};[RK]{I|L}[KA]{NN|[MP]|[D{I|L}]|[EV]}Y{I|L};[RK]RR{NN|[MP]|[D{I|L}]|[EV]}Y{I|L} 1.6621;0.83417;0.25507 -;-;- 25 + 1 1.499 45326.7 1.0 3437 5631 9069 SUDHL4_400M_050219_2,9070 SUDHL4_400M_050219_2,9070,KRDIRRLY False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9071 50.53 250.0 107050.0 25 0 14472.0 + + -1 VLMTEDIKL 9 47 530.8055461378393 1059.5965393424783 2 530.8051635622978 MULTI CID FTMS 0 0 0 9069 41334.98046875 0.2426023596113247 2 -0.0824317932128906 2 Carbamidomethyl (C) _TLIC(Carbamidomethyl (C))AELKL_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1 11.640296217721598 0.521594087909532 6 {I|L}MT 3 -1 14.693 0.0 0.0 1.3866 0.0 0.0 98.07714344579728 613.3181246393186 711.395268085116 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}MT 1.3866 - 23 + 1 1.499 27857.4 1.0 3438 5631 9069 SUDHL4_400M_050219_2,9071 SUDHL4_400M_050219_2,9071,TLICAELKL False False VLMTEDIKL 50.529785 530.805163562298 3914394.0 9069.0 ENSG00000114867|ENST00000346169|EIF4G1;;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;;nc|ENSG00000114867|Q04637-5|EIF4G1;;nc|ENSG00000114867|Q04637-9|EIF4G1;;nc|ENSG00000114867|Q04637-8|EIF4G1;;nc|ENSG00000114867|Q04637-4|EIF4G1;;nc|ENSG00000114867|Q04637-3|EIF4G1;;nc|ENSG00000114867|Q04637-7|EIF4G1;;nc|ENSG00000114867|Q04637-6|EIF4G1 7.118167559305827 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9073 50.535 84.0 793540.0 25 0 68466.0 -1 0 63 887.4116948736543 1772.8088368141084 2 887.4133178591728 MULTI CID FTMS 0 0 0 9072 689668.4375 1.0 0 0.0 1 6 Y{M(Oxidation (M))|F}ANQQA[WD]C(Carbamidomethyl (C)){I|L} 11 -1 69.852 0.0 0.0 3.9402 0.0 0.0 358.2246341751057 0.0 358.2246341751057 0.0 61.893204479383456 0.0 0.0 0 0.3807196863200844 0.0 0.0 1.2302046884880935 Y{M(Oxidation (M))|F}ANQQA[WD]C(Carbamidomethyl (C)){I|L} 3.9402 - 791 + 1 1.499 53434.1 1.0 3439 5632 9072 SUDHL4_400M_050219_2,9073 SUDHL4_400M_050219_2,9073, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9074 50.537 125.0 341290.0 25 0 44815.0 -1 VMAPRTLLL 9 69 515.3096251831087 1028.6046974330172 2 515.3099243044853 MULTI CID FTMS 0 0 0 9072 432997.28125 0.1690218419163527 -5 0.2465133666992187 2 Oxidation (M) _VM(Oxidation (M))APRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 26.268140514670165 0.1969607489560049 6 AD{I|L} 3 -1 33.984 0.0 0.0 3.3039 0.0 0.0 711.4633987909494 0.0 711.4633987909494 0.0 14.988189983980783 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.0 AD{I|L} 3.3039 - 61 1 1.499 39650.1 1.0 3440 5632 9072 SUDHL4_400M_050219_2,9074 SUDHL4_400M_050219_2,9074,VMAPRTLLL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9075 50.541 178.0 317100.0 25 0 49891.0 + 10235 FQNPFRSEL 9 71 569.287492300282 1136.560431667364 2 569.2880737185478 MULTI CID FTMS 0 0 0 9072 269033.03125 0.9692255748666352 -4 0.2073554992675781 3 Unmodified _FQNPFRSEL_ ENSG00000073050|ENST00000262887|XRCC1 22.736283301280096 0.2418982879461534 6 {I|L}{I|L}[YN]M{I|L}N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 9 7 {I|L}{I|L}[YN]M{I|L} + + 32.007 -1.7955 -0.24024 2.8161 2.8161 51.379 0.0 0.0 0.0 0.0 20.769921747127498 0.0 0.0 0 1.0 0.0 0.3054621874040891 0.8494850021680094 {I|L}{I|L}[YN]M{I|L}N{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.8161 - 58 + 1 1.499 48690.6 1.0 3441 5632 9072 SUDHL4_400M_050219_2,9075 SUDHL4_400M_050219_2,9075,FQNPFRSEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9076 50.554 793.0 147920.0 25 0 12310.0 -1 0 85 930.447524213246 1858.880495493292 2 930.9510375857352 MULTI CID FTMS 0 0 0 9072 171129.703125 1.0 0 0.0 4 6 {[QV]|[N{I|L}]|[RA]|[KV]}[HD][QA]AGAQNA{M(Oxidation (M))|F}YQV{I|L} 17 -1 + 120.01 0.0 0.0 6.4561 6.4561 80.053 0.0 0.0 0.0 3.5302717268464363 93.6560827521232 3.5302717268464363 0.7573105260561448 0 0.9698565171985376 1.3979400086720375 0.805462187404089 1.1989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}[HD][QA]AGAQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[C(Carbamidomethyl (C))Q]AGAQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}[DP]GAQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HD][QA]QAQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[C(Carbamidomethyl (C))Q]QAQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HD][RN]GAQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}[HD][QA]AQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[C(Carbamidomethyl (C))Q]AQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}[DP]QQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}QQ{[YC]|[HE]}GAQNA{M(Oxidation (M))|F}YQV{I|L} 6.4561;6.4154;6.3107;6.2562;6.2164;6.0943;6.0943;6.0544;5.9498;5.9446 -;-;-;-;-;-;-;-;-;- 5941 1 1.499 82744.6 1.0 3442 5632 9072 SUDHL4_400M_050219_2,9076 SUDHL4_400M_050219_2,9076, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9077 50.56 313.0 208490.0 25 0 25363.0 + 25817 NLAEKLIGV 9 103 478.7924983306486 0 478.7924987673759 PEAK CID FTMS 0 0 0 9072 147606.640625 0.3848293602336768 -4 0.2073554992675781 5 Unmodified _NLAEKLIGV_ ENSG00000170471|ENST00000262879|RALGAPB;ENST00000495949.1_1_20:37126104-37128277:+|nuORF;nc|ENSG00000170471|Q86X10-3|RALGAPB;nc|ENSG00000170471|Q86X10-4|RALGAPB 41.8396318013385 0.053988301646488 6 N{I|L}{I|L}EN 5 6 36.128 0.0 0.0 3.7808 0.0 0.0 287.1870951946972 82.06688104801015 369.2539762427073 0.0 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.4247425010840047 0.3252574989159953 N{I|L}{I|L}EN 3.7808 - 458 + 1 1.499 54938.5 1.0 3443 5632 9072 SUDHL4_400M_050219_2,9077 SUDHL4_400M_050219_2,9077,NLAEKLIGV True True NLAEKLIGV 50.560064 478.792498767376 1693418.125 9072.0 nc|ENSG00000170471|Q86X10-3|RALGAPB;;ENST00000495949.1_1_20:37126104-37128277:+|nuORF;;ENSG00000170471|ENST00000262879|RALGAPB;;nc|ENSG00000170471|Q86X10-4|RALGAPB 4.789038260777791 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9078 50.574 794.0 111260.0 25 0 9349.1 + 16839 KIAQFLESV 9 131 517.79701680346 1033.57948067372 2 517.7980224490166 MULTI CID FTMS 0 0 0 9072 101429.1171875 0.8316285162492913 1 -0.0703201293945312 6 Unmodified _KIAQFLESV_ ENSG00000112159|ENST00000369393|MDN1 65.23502041540118 0.0231836506122253 6 [{I|L}A]QK{M(Oxidation (M))|F}{I|L}ESV 9 2 + 68.0 0.0 0.0 6.5791 6.5791 84.389 0.0 0.0 0.0 3.539816501778901 8.467874862246568 3.539816501778901 3.539816501778901 0 0.805462187404089 0.8860566476931632 0.5 1.0044321917401078 [{I|L}A]QK{M(Oxidation (M))|F}{I|L}ESV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QAK{I|L}ESV;{[QN]|[E{I|L}]|[KN]}VV{M(Oxidation (M))|F}{I|L}ESV;[QA]{I|L}K{M(Oxidation (M))|F}{I|L}ESV;[QA]{M(Oxidation (M))|F}{I|L}K{I|L}ESV;[{I|L}A]Q{M(Oxidation (M))|F}K{I|L}ESV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}QKA{I|L}ESV;[{I|L}A]GAK{M(Oxidation (M))|F}{I|L}ESV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}VV{I|L}ESV;[K{I|L}]{M(Oxidation (M))|F}AK{I|L}ESV 6.5791;6.2366;6.1835;6.134;5.9662;5.9497;5.9421;5.8936;5.8688;5.7479 -;-;-;-;-;-;-;-;-;- 1934 1 1.499 70368.4 1.0 3444 5632 9072 SUDHL4_400M_050219_2,9078 SUDHL4_400M_050219_2,9078,KIAQFLESV True True KIAQFLESV 50.573789 517.798022449017 534978.5625 9072.0 ENSG00000112159|ENST00000369393|MDN1 5.559748649597168 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9079 50.588 800.0 124510.0 25 0 18245.0 14359 IEVKQKKKSHG 11 95 427.9264985849038 1280.7576663549114 3 427.9254028201103 MULTI CID FTMS 0 0 0 9072 93994.3671875 1.0 0 0.0 7 Unmodified _IEVKQKKKSHG_ ENSG00000131951|ENST00000570145|LRRC9;nc|ENSG00000131951|Q6ZRR7-2|LRRC9;nc|ENSG00000131951|Q6ZRR7|LRRC9 1.1933415558491238 0.8695176722560516 6 M 1 11 8.9258 0.0 0.0 0.69691 0.0 0.0 1131.7098280754176 0.0 1131.7098280754176 0.0 5.826836968319542 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.69691 - 8 + 1 1.499 85540.8 0.9100000262260436 3445 5632 9072 SUDHL4_400M_050219_2,9079 SUDHL4_400M_050219_2,9079,IEVKQKKKSHG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9080 50.6 719.0 184620.0 25 0 14146.0 + -1 VLGPPVPEI 9 96 921.44347370607 1840.87239447894 2 921.4462768435478 MULTI CID FTMS 0 0 0 9072 90692.90625 0.9449709345960848 -4 0.2073554992675781 8 nc|ENSG00000136715|Q9H0E3-2|SAP130;ENSG00000136715|ENST00000643581|SAP130;nc|ENSG00000136715|Q9H0E3-3|SAP130;nc|ENSG00000136715|Q9H0E3|SAP130 6 EAQQNA{M(Oxidation (M))|F}YQV{I|L} 11 -1 72.025 0.0 0.0 3.9125 0.0 0.0 531.245897361525 0.0 531.245897361525 0.0 46.24858847216376 0.0 0.0 0 0.8633643341304672 0.0 0.0 0.805462187404089 EAQQNA{M(Oxidation (M))|F}YQV{I|L} 3.9125 - 973 1 1.499 90732.7 1.0 3446 5632 9072 SUDHL4_400M_050219_2,9080 SUDHL4_400M_050219_2,9080, False False VLGPPVPEI 50.600105 921.446276843548 1469712.625 9072.0 nc|ENSG00000136715|Q9H0E3-2|SAP130;;ENSG00000136715|ENST00000643581|SAP130;;nc|ENSG00000136715|Q9H0E3-3|SAP130;;nc|ENSG00000136715|Q9H0E3|SAP130 3.498626708984375 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9082 50.606 70.0 1068800.0 25 0 142950.0 + 40534 VIWGTDVNV 9 99 501.76631260830254 1001.5180722834052 2 501.7664977908134 MULTI CID FTMS 0 0 0 9081 1196372.875 0.571650697927552 1 -0.0251274108886718 1 Unmodified _VIWGTDVNV_ ENSG00000104738|ENST00000649973|MCM4 40.44857923139169 0.0729940656229577 6 WWWD 4 7 32.479 0.0 0.0 3.243 0.0 0.0 0.0 325.2251395043614 325.2251395043614 5.691358609654884 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.0 WWWD 3.243 - 304 1 1.499 62218.2 1.0 3447 5633 9081 SUDHL4_400M_050219_2,9082 SUDHL4_400M_050219_2,9082,VIWGTDVNV True True VIWGTDVNV 50.605618 501.766497790813 20088132.0 9081.0 ENSG00000104738|ENST00000649973|MCM4 5.0280459721883135 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9083 50.609 145.0 613890.0 25 0 30650.0 -1 0 96 881.9127705109156 1761.8109880886311 2 881.9136230349541 MULTI CID FTMS 0 0 0 9081 506899.875 0.0319250739302767 7 -0.1791839599609375 2 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQNA{M(Oxidation (M))|F}YEV{I|L} 16 -1 + 93.614 0.0 0.0 5.3135 5.3135 76.295 0.0 0.0 0.0 11.365006360318688 8.896292993866552 8.896292993866552 0.6888128940781257 0 0.9876954943324544 2.0 0.2742275032520141 2.079689690656103 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQNA{M(Oxidation (M))|F}YEV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQNA{M(Oxidation (M))|F}YEV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQGGA{M(Oxidation (M))|F}YEV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGA[AG]NA{M(Oxidation (M))|F}YEV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]QAQNA{M(Oxidation (M))|F}YEV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]NA{M(Oxidation (M))|F}YEV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQGGA{M(Oxidation (M))|F}YEV{I|L};[YQ]V[CS]AGAQNA{M(Oxidation (M))|F}YEV{I|L};[YQ]V[CS]AQQNA{M(Oxidation (M))|F}YEV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AGAQNA{M(Oxidation (M))|F}{M(Oxidation (M))|F}Q[KT] 5.3135;5.2744;4.8019;4.8019;4.777;4.7618;4.7618;4.6684;4.6293;4.4918 -;-;-;-;-;-;-;-;-;- 5300 1 1.499 65503.1 1.0 3448 5633 9081 SUDHL4_400M_050219_2,9083 SUDHL4_400M_050219_2,9083, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9084 50.611 142.0 762410.0 25 0 91714.0 + 32165 RVSDINFTL 9 93 532.790188282103 1063.565823631006 2 532.7902709841728 MULTI CID FTMS 0 0 0 9081 633505.625 0.2531197683385342 -5 0.2776756286621094 3 Unmodified _RVSDINFTL_ ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3 75.76082778847304 0.0188720312721366 6 [{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}N{M(Oxidation (M))|F}T{I|L} 9 3 + 80.657 0.0 0.0 7.5837 7.5837 87.533 0.0 0.0 0.0 4.393326938302621 16.478174818886373 4.393326938302621 4.393326938302621 0 0.8807196863200843 1.3979400086720375 1.0044321917401078 1.372363747448347 [{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}N{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}{I|L}N{M(Oxidation (M))|F}T{I|L};[{I|L}T]{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}GG{M(Oxidation (M))|F}T{I|L};[{I|L}V][MN]{I|L}N{M(Oxidation (M))|F}T{I|L};{[QN]|[E{I|L}]|[KN]}{[QS]|[NT]}{I|L}GG{M(Oxidation (M))|F}T{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}N{M(Oxidation (M))|F}T{I|L};[Q{I|L}]{[ES]|[DT]|[{I|L}C]}{I|L}N{M(Oxidation (M))|F}T{I|L};[{I|L}V][MN]{I|L}GG{M(Oxidation (M))|F}T{I|L};[{I|L}T]{M(Oxidation (M))|F}VHS{M(Oxidation (M))|F}T{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}GG{M(Oxidation (M))|F}T{I|L} 7.5837;7.1706;6.7179;6.3831;6.3048;6.0695;5.7032;5.5173;5.3142;5.2037 -;-;-;-;-;-;-;-;-;- 749 1 1.499 85619.9 1.0 3449 5633 9081 SUDHL4_400M_050219_2,9084 SUDHL4_400M_050219_2,9084,RVSDINFTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9085 50.625 800.0 242520.0 25 0 23767.0 + 25930 NLLPKLHIV 9 142 523.8397291329834 1045.6649053327667 2 523.8398315310478 MULTI CID FTMS 0 0 0 9081 173085.859375 0.3006382517004557 1 -0.0251274108886718 4 Unmodified _NLLPKLHIV_ ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1 64.23631603340823 0.0237365939569086 6 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}HV{I|L} 9 2 + 62.277 0.0 0.0 5.9557 5.9557 84.612 0.0 0.0 0.0 20.8330638869719 6.020599913279625 6.020599913279625 6.020599913279625 0 1.674742501084005 2.0 0.0 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}HV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}PK{I|L}H{I|L}V;[H{I|L}][KP]{I|L}{I|L}NV{I|L};[H{I|L}]{I|L}KP{I|L}NV{I|L};[H{I|L}][KP]{I|L}VQV{I|L};[H{I|L}]{I|L}KPVQV{I|L};[KP]{I|L}H{I|L}{I|L}NV{I|L};[KP]H{I|L}{I|L}{I|L}NV{I|L};[H{I|L}][KP]{I|L}{I|L}GGV{I|L};[KP]{I|L}H{I|L}VQV{I|L} 5.9557;5.3799;3.8906;3.6453;3.6028;3.3575;3.2711;3.1638;3.01;2.9832 -;+;-;-;-;-;-;-;-;- + 1192 + 1 1.499 151290.2 0.5400000214576721 3450 5633 9081 SUDHL4_400M_050219_2,9085 SUDHL4_400M_050219_2,9085,NLLPKLHIV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9087 50.635 400.0 65647.0 25 0 12222.0 29883 QRLSRRVHPHR 11 52 481.2835210119388 1440.8287336360163 3 481.2837707400322 MULTI CID FTMS 0 0 0 9086 38354.859375 0.261414927112026 -1 0.0251274108886718 1 Unmodified _QRLSRRVHPHR_ chr22:37232918-37241589|13|37.46|0.4|6.55|-|2|RAC2,None|1;ENST00000249071.10_2_22:37628955-37640306:-|nuORF;ENST00000405484.5_2_22:37628955-37640333:-|nuORF;ENST00000441619.5_1_22:37628955-37640333:-|nuORF 0.3506318815782774 0.8734936314171269 6 {I|L} 1 10 11.109 0.0 0.0 0.77103 0.0 0.0 1309.7335625928508 0.0 1309.7335625928508 0.0 0.2717883116129638 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.77103 + + 7 + 1 1.499 30450.9 1.0 3451 5634 9086 SUDHL4_400M_050219_2,9087 SUDHL4_400M_050219_2,9087,QRLSRRVHPHR False False False False non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_2 9088 50.64 280.0 257890.0 25 0 13565.0 + 26070 NMVDIIHSV 9 111 522.2625422881124 1042.5105316430247 2 522.2628051638603 MULTI CID FTMS 0 0 0 9086 89939.953125 0.113481086830536 -7 0.3419609069824219 2 Oxidation (M) _NM(Oxidation (M))VDIIHSV_ ENSG00000114054|ENST00000251654|PCCB;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;nc|ENSG00000114054|P05166-2|PCCB 71.13359017698441 0.0206607516130725 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VD{I|L}{I|L}HSV 9 0 + 58.412 0.0 0.0 5.603 5.603 91.52 0.0 0.0 0.0 41.6686674036857 18.08496944798168 18.08496944798168 34.4591519139028 0 0.7887254899964358 0.0 1.9489700043360187 0.0 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VD{I|L}{I|L}HSV;[HS]V{I|L}[{M(Oxidation (M))|F}V]V{[QD]|[EN]|[WG]|[KD]|[RS]};[H{I|L}]SV[{M(Oxidation (M))|F}V]V{[QD]|[EN]|[WG]|[KD]|[RS]};[H{I|L}]S{I|L}[MT]V{[QD]|[EN]|[WG]|[KD]|[RS]};[HS]{I|L}V[{M(Oxidation (M))|F}V]V{[QD]|[EN]|[WG]|[KD]|[RS]};[HS]{I|L}{I|L}[MT]V{[QD]|[EN]|[WG]|[KD]|[RS]};[HS]V{I|L}EVV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HS]V{I|L}{I|L}DV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HS]V{I|L}{I|L}[MT]{[QD]|[EN]|[WG]|[KD]|[RS]};[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}VSV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 5.603;2.2976;1.872;1.779;1.6271;1.5342;1.081;0.98806;0.94276;0.80214 +;-;-;-;-;-;-;-;-;- + 345 + 1 1.499 59580.3 1.0 3452 5634 9086 SUDHL4_400M_050219_2,9088 SUDHL4_400M_050219_2,9088,NMVDIIHSV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9091 50.661 800.0 139050.0 25 0 18478.0 6868 EEEEPENPYL 10 115 624.7671037294685 1247.519654525737 2 624.7673217654228 MULTI CID FTMS 0 0 0 9090 109300.3984375 0.7456660027130921 -1 0.0040740966796875 1 Unmodified _EEEEPENPYL_ ENSG00000176092|ENST00000308182|CRYBG2 10.073929032068715 0.6785112666868882 6 {[DA]|[EG]}DA[SG]YY{I|L}HH 11 9 + 22.522 0.0 0.0 1.8053 1.8053 71.579 0.0 0.0 0.0 1.8324039558940408 4.54561040926745 1.8324039558940408 3.0102999566398125 0 0.3494850021680094 0.0 0.6307196863200843 0.0 {[DA]|[EG]}DA[SG]YY{I|L}HH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GA[SG]YY{I|L}HH;{[DA]|[EG]}EG[SG]YY{I|L}HH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}Q[SG]YY{I|L}HH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}AG[SG]YY{I|L}HH;{[DA]|[EG]}D{[QS]|[NT]}YY{I|L}HH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[QS]|[NT]}YY{I|L}HH;{[DA]|[EG]}E[NS]YY{I|L}HH;[MT][YC(Carbamidomethyl (C))]{[WT]|[RM]}{I|L}HH;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}A[NS]YY{I|L}HH 1.8053;1.564;1.4229;1.2782;1.1816;1.0175;0.77619;0.63504;0.4657;0.39373 -;-;-;-;-;-;-;-;-;- 696 1 1.499 87808.3 0.5099999904632568 3453 5636 9090 SUDHL4_400M_050219_2,9091 SUDHL4_400M_050219_2,9091,EEEEPENPYL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9092 50.67 514.0 145550.0 25 0 25881.0 + 40624 VLDDKDYFL 9 90 564.2843735038899 1126.5541940745798 2 564.2842285037041 MULTI CID FTMS 0 0 0 9090 121527.671875 0.3019836616515506 5 -0.1515426635742187 2 Unmodified _VLDDKDYFL_ ENSG00000115541|ENST00000233893|HSPE1;ENST00000465573.1_1_2:198365552-198367980:+|nuORF;ENST00000550617.1_1_12:102267096-102267252:-|nuORF 29.081581746732265 0.1611639662936252 6 [{I|L}V]DNV{I|L}D 7 6 46.317 0.0 0.0 4.1114 0.0 0.0 0.0 355.1256502740844 355.1256502740844 28.12932583326273 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.75 0.0 [{I|L}V]DNV{I|L}D 4.1114 - 175 + 1 1.499 66873.5 1.0 3454 5636 9090 SUDHL4_400M_050219_2,9092 SUDHL4_400M_050219_2,9092,VLDDKDYFL False True VLDDKDYFL 50.669599 564.284228503704 4621529.5 9090.0 ENSG00000115541|ENST00000233893|HSPE1;;ENST00000465573.1_1_2:198365552-198367980:+|nuORF;;ENST00000550617.1_1_12:102267096-102267252:-|nuORF 1.3111030428359909 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9093 50.681 662.0 71138.0 25 0 6768.5 19456 LFERNRRV 8 81 545.3179216157648 1088.6212902983295 2 545.3181030154228 MULTI CID FTMS 0 0 0 9090 101541.640625 1.0 0 0.0 3 Unmodified _LFERNRRV_ ENSG00000204311|ENST00000644580|PJVK 12.531546534597751 0.7257836412119636 6 V 1 7 9.464 0.0 0.0 0.86935 0.0 0.0 971.5417289963748 0.0 971.5417289963748 0.0 0.691513490831408 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.86935 + + 20 + 1 1.499 44992.9 1.0 3455 5636 9090 SUDHL4_400M_050219_2,9093 SUDHL4_400M_050219_2,9093,LFERNRRV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9094 50.695 800.0 66988.0 25 0 4185.6 -1 0 78 1034.996538145546 2067.9785233578923 2 1035.496630847454 MULTI CID FTMS 0 0 0 9090 95403.2421875 0.7357419298398669 1 -0.0508384704589843 4 6 PPPPP 5 -1 31.454 0.0 0.0 1.521 0.0 0.0 1225.5511821791613 354.14328943424067 1579.694471613402 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 PPPPP 1.521 - 402 + 1 1.499 44804.3 0.4000000059604645 3456 5636 9090 SUDHL4_400M_050219_2,9094 SUDHL4_400M_050219_2,9094, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9096 50.705 366.0 338980.0 25 0 33215.0 -1 0 91 915.4422141848364 1828.869875436473 2 915.4426147341728 MULTI CID FTMS 0 0 0 9095 171016.96875 0.2611029800192067 -4 0.0948867797851562 1 6 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 107.08 0.0 0.0 5.8553 5.8553 86.515 0.0 0.0 0.0 12.341532552839029 9.805261500434 9.805261500434 9.030899869919438 0 1.2064608101803795 1.5228787452803376 0.0 1.1989700043360187 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQGGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ]VEEAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEP[KC]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]NA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]GGA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQGGA{M(Oxidation (M))|F}Y[AG]V{I|L} 5.8553;5.3615;5.3615;5.3615;5.3615;5.1804;4.8983;4.8686;4.8686;4.8686 -;-;-;-;-;-;-;-;-;- 3356 1 1.499 86465.4 1.0 3457 5637 9095 SUDHL4_400M_050219_2,9096 SUDHL4_400M_050219_2,9096, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9097 50.707 33.0 1531100.0 25 0 182800.0 + 40997 VMAPRTLLL 9 64 507.31221761833217 1012.6098823034644 2 507.3125182986259 MULTI CID FTMS 0 0 0 9095 1362132.75 0.7069403933983808 -1 0.0508384704589843 2 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 26.268140514670165 0.1969607489560049 6 VMA 3 6 47.435 0.0 0.0 4.6844 0.0 0.0 0.0 708.4417047617735 708.4417047617735 19.47621246364342 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + VMA 4.6844 + + 33 + 1 1.499 45339.5 1.0 3458 5637 9095 SUDHL4_400M_050219_2,9097 SUDHL4_400M_050219_2,9097,VMAPRTLLL False True VMAPRTLLL 50.706663 507.312518298626 11127645.0 9095.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 2.538359045982361 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9098 50.721 800.0 113730.0 25 0 11758.0 + 44380 YLTEQLVAIYH 11 97 675.3580982707706 1348.701643608341 2 675.3583862185478 MULTI CID FTMS 0 0 0 9095 128033.546875 0.7180407705594194 -4 0.0948867797851562 3 Unmodified _YLTEQLVAIYH_ ENST00000542112.5_1_11:62621512-62623345:-|nuORF 78.7280429016045 0.0086025745061204 6 Y{I|L}TEQ{I|L}VA{I|L}YH 11 0 + 114.74 0.0 0.0 8.5077 8.5077 91.406 0.0 0.0 0.0 69.67639454691746 15.070623213458036 15.070623213458036 7.7815125038364386 0 0.805462187404089 2.0 0.4247425010840047 0.5 + + Y{I|L}TEQ{I|L}VA{I|L}YH;Y{I|L}TEQ{I|L}{I|L}G{I|L}YH;Y{I|L}TE[AG]{I|L}VA{I|L}YH;Y{I|L}TE[AG]{I|L}{I|L}G{I|L}YH;Y{I|L}TEQ{I|L}V[C(Carbamidomethyl (C))K][VP];Y{I|L}TE[AG]{I|L}V[C(Carbamidomethyl (C))K][VP] 8.5077;7.9308;7.4602;6.8832;5.8198;5.143 +;-;-;-;-;- + 1174 + 1 1.499 74040.7 0.5 3459 5637 9095 SUDHL4_400M_050219_2,9098 SUDHL4_400M_050219_2,9098,YLTEQLVAIYH True True YLTEQLVAIYH 50.7205 675.358386218548 945269.0 9095.0 ENST00000542112.5_1_11:62621512-62623345:-|nuORF 7.241871039072673 2.0 True 11.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9099 50.727 374.0 199660.0 25 0 12269.0 + 25436 NEFPEPIKL 9 109 543.7950051663605 1085.575457399521 2 543.7939941287041 MULTI CID FTMS 0 0 0 9095 103673.0703125 0.1763514290759674 -6 0.1773185729980468 4 Unmodified _NEFPEPIKL_ ENSG00000075785|ENST00000265062|RAB7A 56.17704186161178 0.0281986971544335 6 [{I|L}P]K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F} 7 7 33.989 0.0 0.0 3.1309 0.0 0.0 0.0 240.0639369949013 240.0639369949013 9.202198501711862 0.0 0.0 0.0 0 1.0 1.3979400086720375 0.8494850021680094 0.0 [{I|L}P]K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{M(Oxidation (M))|F} 3.1309 - 187 1 1.499 62508.4 1.0 3460 5637 9095 SUDHL4_400M_050219_2,9099 SUDHL4_400M_050219_2,9099,NEFPEPIKL True True NEFPEPIKL 50.72723 543.793994128704 12266545.5 9095.0 ENSG00000075785|ENST00000265062|RAB7A 6.146526495615642 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9101 50.734 205.0 126200.0 25 0 10412.0 -1 VLMTEDIKL 9 61 539.296008191403 1076.5774634496058 2 539.2967407107353 MULTI CID FTMS 0 0 0 9100 96765.9765625 0.2210344711160069 3 -0.0684547424316406 1 Oxidation (M) _VLM(Oxidation (M))TEDIKL_ ENSG00000114867|ENST00000346169|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-3|EIF4G1;nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1 22.736283301280096 0.2418982879461534 6 [{I|L}V]{M(Oxidation (M))|F}T 4 -1 44.253 0.0 0.0 4.1105 0.0 0.0 0.0 613.3187349908811 613.3187349908811 32.034021960761265 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 [{I|L}V]{M(Oxidation (M))|F}T 4.1105 + + 18 + 1 1.499 25949.9 1.0 3461 5638 9100 SUDHL4_400M_050219_2,9101 SUDHL4_400M_050219_2,9101,VLMTEDIKL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9102 50.748 800.0 69875.0 25 0 16248.0 + 19393 LERVRREREAK 11 74 721.4214893910391 1440.8284258488782 2 721.4213744997978 MULTI CID FTMS 0 0 0 9100 119100.1796875 0.5747203139845307 3 -0.0684547424316406 2 Unmodified _LERVRREREAK_ REV__ENSG00000101333|ENST00000378473|PLCB4;REV__ENST00000464199.5_1_20:9351789-9459633:+|nuORF;REV__nc|ENSG00000101333|Q15147-2|PLCB4;REV__nc|ENSG00000101333|Q15147-4|PLCB4;REV__nc|ENSG00000101333|Q15147-5|PLCB4;REV__nc|ENSG00000101333|Q15147|PLCB4 5.731851221503515 0.8481046878870278 6 {[{M(Oxidation (M))|F}D]|MM}{I|L}TD 5 -1 29.961 0.0 0.0 2.0794 0.0 0.0 0.0 846.5518504917094 846.5518504917094 13.91650614351775 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 {[{M(Oxidation (M))|F}D]|MM}{I|L}TD 2.0794 - 97 1 1.499 52314.6 0.5199999809265137 3462 5638 9100 SUDHL4_400M_050219_2,9102 SUDHL4_400M_050219_2,9102,LERVRREREAK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9103 50.761 800.0 140230.0 25 0 23547.0 + 9533 FLFNTENKL 9 105 563.3009102912285 1124.587267649257 2 563.3007690310478 MULTI CID FTMS 0 0 0 9100 123246.640625 0.8097993525740526 -3 0.0871620178222656 3 Unmodified _FLFNTENKL_ ENSG00000067064|ENST00000381344|IDI1;nc|ENSG00000067064|Q13907|IDI1 78.7280429016045 0.0178249292250809 6 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}NTENK{I|L} 9 0 + 82.781 0.0 0.0 7.361 7.361 91.821 0.0 0.0 0.0 54.97512310759854 12.100979181436443 12.100979181436443 9.208187539523747 0 0.4247425010840047 0.0 1.086696871556164 1.4124379954164592 + + {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}NTENK{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GGTENK{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}NTEGGK{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GGTEGGK{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}NDP;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}[TA][DG]NK{I|L};{[ET]|[MV]}N{M(Oxidation (M))|F}{I|L}{I|L}{M(Oxidation (M))|F}{I|L}E;{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T[K{I|L}]N{M(Oxidation (M))|F}{I|L}E;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}{I|L}ET{[QD]|[EN]|[WG]|[KD]|[RS]};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{I|L}{I|L}E{[QC]|[C(Carbamidomethyl (C))A]}{I|L} 7.361;6.5422;6.5422;5.7273;4.4678;4.3202;4.2955;4.225;4.225;3.9903 +;-;-;-;-;-;-;-;-;- + 1181 + 1 1.499 87355.4 0.5 3463 5638 9100 SUDHL4_400M_050219_2,9103 SUDHL4_400M_050219_2,9103,FLFNTENKL True True FLFNTENKL 50.761365 563.300769031048 878422.375 9100.0 nc|ENSG00000067064|Q13907|IDI1;;ENSG00000067064|ENST00000381344|IDI1 6.024894714355469 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9104 50.775 800.0 81667.0 25 0 14985.0 -1 0 78 1044.506493559155 3130.4976512776648 3 1044.842211902142 MULTI CID FTMS 0 0 0 9100 72609.578125 0.8688550459545815 -1 0.0322494506835937 4 6 [MN]M 3 -1 34.705 0.0 0.0 1.1086 0.0 0.0 0.0 2751.2909106772177 2751.2909106772177 10.628012370588705 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [MN]M 1.1086 - 695 + 1 1.499 50696.5 0.3700000047683716 3464 5638 9100 SUDHL4_400M_050219_2,9104 SUDHL4_400M_050219_2,9104, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9107 50.796 800.0 44611.0 25 0 4762.9 -1 0 57 1050.171976121186 3147.494098963758 3 1050.508105456829 MULTI CID FTMS 0 0 0 9106 86633.3515625 0.3231051714337761 -2 0.0520477294921875 1 6 {I|L}[KC]{[QD]|[EN]|[WG]|[KD]|[RS]} 5 -1 11.478 0.0 0.0 0.36468 0.0 0.0 2542.1851218033385 0.0 2542.1851218033385 0.0 -1.7094128073577508 -1.7094128073577508 0.0 0 0.5 0.0 0.0 0.0 {I|L}[KC]{[QD]|[EN]|[WG]|[KD]|[RS]} 0.36468 - 58 1 1.499 33031.9 0.4399999976158142 3465 5640 9106 SUDHL4_400M_050219_2,9107 SUDHL4_400M_050219_2,9107, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9109 50.8 74.0 1912200.0 25 0 238660.0 + 40999 VMAPRTLLL 9 86 515.3096251831087 1028.6046974330172 2 515.3100463747978 MULTI CID FTMS 0 0 0 9108 2538365.75 0.9908590032801372 4 -0.1550750732421875 1 Oxidation (M) _VM(Oxidation (M))APRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 40.23920728925047 0.0741434193262949 6 PAD{I|L} 4 7 36.714 0.0 0.0 3.5693 0.0 0.0 614.4149647443375 0.0 614.4149647443375 0.0 19.724797210082343 0.0 0.0 0 1.3807196863200843 0.0 0.0 0.0 PAD{I|L} 3.5693 - 119 1 1.499 111178.0 1.0 3466 5641 9108 SUDHL4_400M_050219_2,9109 SUDHL4_400M_050219_2,9109,VMAPRTLLL True False VMAPRTLLL 50.800481 515.310046374798 32645270.0 9108.0 ENST00000495183.5_1_6:29910330-29910808:+|nuORF;;ENSG00000206503|ENST00000376809|HLA-A;;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;;nc|ENSG00000206503|P04439-2|HLA-A;;ENST00000496081.5_1_6:29910330-29912419:+|nuORF 4.83148717880249 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9110 50.814 800.0 195170.0 25 0 29308.0 + 10236 FQNPFRSEL 9 115 569.287492300282 1136.560431667364 2 569.2881957888603 MULTI CID FTMS 0 0 0 9108 107965.65625 0.3889599532018795 5 -0.1728096008300781 2 Unmodified _FQNPFRSEL_ ENSG00000073050|ENST00000262887|XRCC1 69.10491478415734 0.0214449631113747 6 {I|L}E{M(Oxidation (M))|F}NQE 6 7 64.385 0.0 0.0 5.6649 0.0 0.0 358.19819838691564 0.0 358.19819838691564 0.0 44.3753063169585 0.0 0.0 0 0.9247425010840048 0.0 1.1549471895720984 0.8807196863200843 {I|L}E{M(Oxidation (M))|F}NQE 5.6649 - 1023 1 1.499 115872.8 0.449999988079071 3467 5641 9108 SUDHL4_400M_050219_2,9110 SUDHL4_400M_050219_2,9110,FQNPFRSEL True True FQNPFRSEL 50.814312 569.28819578886 5333950.5 9108.0 ENSG00000073050|ENST00000262887|XRCC1 4.50436806678772 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9111 50.822 413.0 241270.0 25 0 43052.0 + 33944 SLHDAIMIV 9 110 507.76807393187966 1013.5215949305592 2 507.7683593630791 MULTI CID FTMS 0 0 0 9108 302431.375 0.2760107308118176 5 -0.1728096008300781 3 Oxidation (M) _SLHDAIM(Oxidation (M))IV_ ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;nc|ENSG00000135624|Q99832-4|CCT7 57.47134341890925 0.0274820932774257 6 {[TV]|[{I|L}S]}HDA{I|L}{M(Oxidation (M))|F}{I|L}V 9 0 + 53.966 0.0 0.0 5.3246 5.3246 84.437 0.0 0.0 0.0 9.87765543582988 9.889917747712644 9.87765543582988 8.57840941039747 0 0.7742275032520141 1.0457574905606752 1.0114393726401687 0.0 + + {[TV]|[{I|L}S]}HDA{I|L}{M(Oxidation (M))|F}{I|L}V;{[TV]|[{I|L}S]}HDA{M(Oxidation (M))|F}{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[HS]A{I|L}{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[HA]S{I|L}{M(Oxidation (M))|F}{I|L}V;{[TV]|[{I|L}S]}H{[VA]|[{I|L}G]}E{M(Oxidation (M))|F}{I|L}V;{[TV]|[{I|L}S]}HDMS{I|L}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[HS]A{M(Oxidation (M))|F}{I|L}{I|L}V;[HD]{[TV]|[{I|L}S]}A{I|L}{M(Oxidation (M))|F}{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[HA]S{M(Oxidation (M))|F}{I|L}{I|L}V;[HD][{I|L}A]S{I|L}{M(Oxidation (M))|F}{I|L}V 5.3246;4.4782;4.35;4.053;3.7017;3.6865;3.5036;3.3547;3.2066;3.0577 +;-;-;-;-;-;-;-;-;- + 750 1 1.499 79185.0 1.0 3468 5641 9108 SUDHL4_400M_050219_2,9111 SUDHL4_400M_050219_2,9111,SLHDAIMIV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9112 50.836 800.0 81006.0 25 0 4619.6 + 41038 VMIGGEPYTL 10 107 548.2731569106681 1094.5317608881362 2 548.2735473513603 MULTI CID FTMS 0 0 0 9108 96048.421875 0.6748850836440001 -2 0.0204696655273437 4 Oxidation (M) _VM(Oxidation (M))IGGEPYTL_ ENSG00000070831|ENST00000656825|CDC42;nc|ENSG00000289694|P60953-1|CDC42 48.345845343767074 0.089859443182303 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VG{[DA]|[EG]}PV 8 5 41.208 0.0 0.0 3.7649 0.0 0.0 0.0 293.11816160518623 293.11816160518623 16.85488906808553 0.0 0.0 0.0 0 0.805462187404089 1.3979400086720375 0.3054621874040891 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}VG{[DA]|[EG]}PV 3.7649 - 748 1 1.499 57833.2 0.3700000047683716 3469 5641 9108 SUDHL4_400M_050219_2,9112 SUDHL4_400M_050219_2,9112,VMIGGEPYTL True False VMIGGEPYTL 50.83551 548.27354735136 628495.5625 9108.0 nc|ENSG00000289694|P60953-1|CDC42;;ENSG00000070831|ENST00000656825|CDC42 5.83258326848348 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9113 50.849 800.0 57580.0 25 0 4559.8 -1 0 64 1057.849055323903 3170.525336571909 3 1058.184008777142 MULTI CID FTMS 0 0 0 9108 71391.1953125 0.4159936300403089 -5 0.1515426635742187 5 6 M{[QD]|[EN]|[WG]|[KD]|[RS]} 3 -1 13.952 0.0 0.0 0.44007 0.0 0.0 2778.345571714455 0.0 2778.345571714455 0.0 5.993624753846094 0.0 0.0 0 0.5 0.0 0.0 0.0 M{[QD]|[EN]|[WG]|[KD]|[RS]} 0.44007 - 28 1 1.499 40018.1 0.270000010728836 3470 5641 9108 SUDHL4_400M_050219_2,9113 SUDHL4_400M_050219_2,9113, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9115 50.861 454.0 142400.0 25 0 22710.0 + 11754 GLISAQQKL 9 95 479.291123318716 956.567693704232 2 479.2906066775322 MULTI CID FTMS 0 0 0 9114 91577.4765625 0.1752823438438885 6 -0.2293853759765625 1 Unmodified _GLISAQQKL_ REV__ENSG00000122435|ENST00000370141|TRMT13 26.88365393820708 0.1891292719743517 6 {[VA]|[{I|L}G]}{I|L}D 4 -1 43.812 0.0 0.0 4.5802 0.0 0.0 0.0 555.3265835473868 555.3265835473868 19.1195437047216 0.0 0.0 0.0 0 0.7614393726401688 2.0 0.0 0.0 {[VA]|[{I|L}G]}{I|L}D 4.5802 - 129 + 1 1.499 55436.5 1.0 3471 5642 9114 SUDHL4_400M_050219_2,9115 SUDHL4_400M_050219_2,9115,GLISAQQKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9116 50.864 154.0 370380.0 25 0 51716.0 + 1655 ALNELLQHV 9 82 518.7928817841953 1035.5712106351905 2 518.7927734255791 MULTI CID FTMS 0 0 0 9114 361164.65625 0.721219625953018 -2 0.0700874328613281 2 Unmodified _ALNELLQHV_ ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1 56.17704186161178 0.0281986971544335 6 [{I|L}A]NE{I|L}{I|L}Q[HV] 9 0 + 79.802 0.0 0.0 7.7061 7.7061 92.52 0.0 0.0 0.0 58.102802969692746 7.147642715192504 7.147642715192504 9.208187539523747 0 1.0387254899964358 2.0 0.3807196863200844 0.8494850021680094 + + [{I|L}A]NE{I|L}{I|L}Q[HV];[{I|L}A]GGE{I|L}{I|L}Q[HV];[{I|L}A]NE{I|L}{I|L}[AG][HV];[{I|L}A]GGE{I|L}{I|L}[AG][HV] 7.7061;6.8169;6.4068;5.1116 +;-;-;- + 160 + 1 1.499 48754.4 1.0 3472 5642 9114 SUDHL4_400M_050219_2,9116 SUDHL4_400M_050219_2,9116,ALNELLQHV True True ALNELLQHV 50.864354 518.792773425579 2446967.25 9114.0 nc|ENSG00000137076|Q9Y490-2|TLN1;;ENSG00000137076|ENST00000314888|TLN1 9.718162854512531 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9117 50.878 800.0 136200.0 25 0 18549.0 + 1622 ALLTGIISKA 10 117 493.8155463137706 985.6165396943412 2 493.8165466189384 MULTI CID FTMS 0 0 0 9114 118468.703125 0.546026439011048 -2 0.0700874328613281 3 Unmodified _ALLTGIISKA_ ENSG00000155561|ENST00000285968|NUP205 43.9818466556824 0.1155196613165264 6 [{I|L}A]{I|L}TG{I|L}{I|L}SKA 10 0 + 72.159 0.0 0.0 7.3212 7.3212 93.038 0.0 0.0 0.0 34.73197507588033 7.244237387763093 7.244237387763093 10.134279935629364 0 1.1237125054200234 2.0 0.3807196863200844 0.25 + + [{I|L}A]{I|L}TG{I|L}{I|L}SKA;[{I|L}A]{I|L}TG{I|L}{I|L}KSA;[{I|L}A]S{I|L}SRRA{I|L};[{I|L}A]{I|L}SSRRA{I|L};[{I|L}A]SVTRRA{I|L};[{I|L}A]SS{I|L}RRA{I|L};[{I|L}A]{I|L}TA[RK][DV];[{I|L}A]SVV[RK][DV];[{I|L}T]G{I|L}SRRA{I|L};{[VA]|[{I|L}G]}T{I|L}SRRA{I|L} 7.3212;6.2929;4.1803;4.0892;3.3353;3.2765;3.2082;2.5454;2.353;1.7533 +;-;-;-;-;-;-;-;-;- + 1074 + 1 1.499 84940.6 0.449999988079071 3473 5642 9114 SUDHL4_400M_050219_2,9117 SUDHL4_400M_050219_2,9117,ALLTGIISKA True True ALLTGIISKA 50.878168 493.816546618938 752754.25 9114.0 ENSG00000155561|ENST00000285968|NUP205 5.674079259236653 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9119 50.883 64.0 840600.0 25 0 54662.0 -1 0 68 881.9067372048643 1761.7989214765284 2 881.9070922732353 MULTI CID FTMS 0 0 0 9118 961432.9375 0.6156196201061049 4 -0.1393775939941406 1 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQ[{I|L}V] 15 -1 + 96.806 0.0 0.0 5.4947 5.4947 83.793 0.0 0.0 0.0 9.703130085915063 73.87394998465425 9.703130085915063 6.690067809585756 0 0.3494850021680094 1.3010299956639813 0.6861818737241735 1.5356668758921828 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQW{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]DA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QDA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]AQQDA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQW{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]W{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QW{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]AQQW{M(Oxidation (M))|F}YQ[{I|L}V] 5.4947;5.115;4.9821;4.9821;4.9821;4.9271;4.6013;4.6013;4.6013;4.5474 -;-;-;-;-;-;-;-;-;- 1329 1 1.499 43966.5 1.0 3474 5643 9118 SUDHL4_400M_050219_2,9119 SUDHL4_400M_050219_2,9119, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9120 50.885 72.0 665440.0 25 0 70859.0 + 32166 RVSDINFTL 9 61 532.790188282103 1063.565823631006 2 532.7905761599541 MULTI CID FTMS 0 0 0 9118 680843.0 0.2720336104906924 5 -0.200592041015625 2 Unmodified _RVSDINFTL_ ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3 16.149105407346934 0.3995459350917656 6 [{I|L}T]GW{I|L}N{M(Oxidation (M))|F}T{I|L} 9 4 + 50.741 0.0 0.0 4.7708 4.7708 84.052 0.0 0.0 0.0 16.222412206649466 34.74259626391344 16.222412206649466 9.208187539523747 0 0.7429928190999391 1.3979400086720375 0.0 0.0 [{I|L}T]GW{I|L}N{M(Oxidation (M))|F}T{I|L};[{I|L}T]GW{I|L}GG{M(Oxidation (M))|F}T{I|L};[{I|L}T]GW[KA]{M(Oxidation (M))|F}E{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}N{M(Oxidation (M))|F}T{I|L};[WR][WR]{M(Oxidation (M))|F}T{I|L};[{I|L}T]G{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WN]|[YH]}T{I|L};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[VP]{I|L}GG{M(Oxidation (M))|F}T{I|L};[WR][WK]{M(Oxidation (M))|F}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}[KA]W[RP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}[KA]{[DA]|[EG]}GPV 4.7708;3.905;2.8208;2.142;1.6619;1.5279;1.2763;1.1918;1.1174;0.68974 -;-;-;-;-;-;-;-;-;- 196 1 1.499 48073.2 1.0 3475 5643 9118 SUDHL4_400M_050219_2,9120 SUDHL4_400M_050219_2,9120,RVSDINFTL False True RVSDINFTL 50.884664 532.790576159954 24933040.0 9118.0 nc|ENSG00000110075|Q5H9R7-6|PPP6R3;;ENSG00000110075|ENST00000393800|PPP6R3;;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;;nc|ENSG00000110075|Q5H9R7-3|PPP6R3;;nc|ENSG00000110075|Q5H9R7-5|PPP6R3 4.787856817245483 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9121 50.889 229.0 226010.0 25 0 34816.0 + 2244 AQFEHTILL 9 93 536.2969673709729 1070.5793818087457 2 536.2948486208916 MULTI CID FTMS 0 0 0 9118 219076.890625 0.2622738532314655 -4 0.1029434204101562 3 Unmodified _AQFEHTILL_ ENSG00000111142|ENST00000323666|METAP2;nc|ENSG00000111142|P50579-2|METAP2;nc|ENSG00000111142|P50579-3|METAP2 30.63653989081413 0.1413794767160703 6 [QA][WE]{I|L}[QA]{I|L}{I|L} 9 4 + 38.348 0.0 0.0 3.582 3.582 52.957 0.0 0.0 0.0 13.739306668753464 11.58416541165608 11.58416541165608 0.0 0 0.7429928190999391 0.8538719643217619 1.25 0.4247425010840047 [QA][WE]{I|L}[QA]{I|L}{I|L};[QA][WE][QA]{I|L}{I|L}{I|L};[QA][WE]RR{I|L}{I|L};[HT]{I|L}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}T{I|L}{I|L}{I|L} 3.582;3.582;2.5802;1.459 -;-;-;- 123 1 1.499 45776.2 1.0 3476 5643 9118 SUDHL4_400M_050219_2,9121 SUDHL4_400M_050219_2,9121,AQFEHTILL False True AQFEHTILL 50.888981 536.294848620892 4131010.0 9118.0 ENSG00000111142|ENST00000323666|METAP2;;nc|ENSG00000111142|P50579-2|METAP2;;nc|ENSG00000111142|P50579-3|METAP2 4.5765024820963545 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9122 50.903 800.0 116600.0 25 0 10929.0 + 40535 VIWGTDVNV 9 131 501.76631260830254 1001.5180722834052 2 501.7661620974541 MULTI CID FTMS 0 0 0 9118 88657.328125 0.0423622305036364 11 -0.4556922912597656 4 Unmodified _VIWGTDVNV_ ENSG00000104738|ENST00000649973|MCM4 24.67388899826682 0.2172451872415813 6 [{I|L}V]{[C(Carbamidomethyl (C))E]|[WC]}G{I|L} 6 6 33.931 0.0 0.0 3.3879 0.0 0.0 0.0 327.1676443871739 327.1676443871739 19.67802475701326 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.7302046884880937 0.0 [{I|L}V]{[C(Carbamidomethyl (C))E]|[WC]}G{I|L} 3.3879 - 407 1 1.499 76359.6 0.3899999856948852 3477 5643 9118 SUDHL4_400M_050219_2,9122 SUDHL4_400M_050219_2,9122,VIWGTDVNV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9124 50.909 204.0 225510.0 25 0 12777.0 + 26071 NMVDIIHSV 9 82 522.2625422881124 1042.5105316430247 2 522.2632934451103 MULTI CID FTMS 0 0 0 9123 250418.078125 0.3159632030066068 3 -0.1147537231445312 1 Oxidation (M) _NM(Oxidation (M))VDIIHSV_ ENSG00000114054|ENST00000251654|PCCB;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;nc|ENSG00000114054|P05166-2|PCCB 71.13359017698441 0.0206607516130725 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VD{I|L}{I|L}HSV 9 0 + 56.692 0.0 0.0 5.438 5.438 90.797 0.0 0.0 0.0 35.7574378677317 16.88016919553025 16.88016919553025 31.124508000089964 0 0.8252574989159953 0.0 1.9802046884880933 0.0 + + {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}VD{I|L}{I|L}HSV;[HS]V{I|L}[{M(Oxidation (M))|F}V]V{[QD]|[EN]|[WG]|[KD]|[RS]};[H{I|L}]{I|L}DSVV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[H{I|L}]{I|L}DVSV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[H{I|L}][VS][{M(Oxidation (M))|F}V]V{[QD]|[EN]|[WG]|[KD]|[RS]};[HS]V{I|L}EVV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HS]V{I|L}{I|L}DV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[HS]V{I|L}{I|L}[MT]{[QD]|[EN]|[WG]|[KD]|[RS]};[H{I|L}]{I|L}SDVV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]};[H{I|L}]{I|L}SVDV{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]} 5.438;2.4525;1.6585;1.5656;1.4003;1.2009;1.1079;1.0626;0.79226;0.6993 +;-;-;-;-;-;-;-;-;- + 281 + 1 1.499 38274.6 1.0 3478 5644 9123 SUDHL4_400M_050219_2,9124 SUDHL4_400M_050219_2,9124,NMVDIIHSV True False NMVDIIHSV 50.909237 522.26329344511 7431857.5 9123.0 ENSG00000114054|ENST00000251654|PCCB;;ENST00000475214.5_1_3:135974226-136045892:+|nuORF;;nc|ENSG00000114054|P05166-2|PCCB 7.636440912882487 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9125 50.923 800.0 91192.0 25 0 11331.0 -1 0 65 664.6687198425465 1990.98433012784 3 664.6694824099541 MULTI CID FTMS 0 0 0 9123 104653.6484375 0.8527999283925646 -2 0.0534172058105468 2 6 {I|L}H{I|L}Q{[CP]|[EA]} 6 -1 32.224 0.0 0.0 1.6185 0.0 0.0 1281.5749664872767 0.0 1281.5749664872767 0.0 0.2865969499212184 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}H{I|L}Q{[CP]|[EA]} 1.6185 - 122 1 1.499 64407.5 0.4300000071525574 3479 5644 9123 SUDHL4_400M_050219_2,9125 SUDHL4_400M_050219_2,9125, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9126 50.937 800.0 116500.0 25 0 15518.0 -1 0 115 887.365179011147 1772.715805089094 2 887.3661376833916 MULTI CID FTMS 0 0 0 9123 110471.765625 0.5250317850912717 -3 0.1070976257324218 3 6 [WD]GYAAQQ[YE]W 11 -1 54.931 0.0 0.0 3.0987 0.0 0.0 0.0 372.135796436368 372.135796436368 13.28316113020248 0.0 0.0 0.0 0 1.1069758080123702 1.3979400086720375 1.066901560044258 0.9247425010840048 [WD]GYAAQQ[YE]W 3.0987 - 15665 1 1.499 64762.5 0.4600000083446502 3480 5644 9123 SUDHL4_400M_050219_2,9126 SUDHL4_400M_050219_2,9126, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9127 50.951 800.0 62696.0 25 0 7364.6 + 1652 ALNEEAGRLLL 11 81 599.8425751859431 1197.6705974386862 2 599.8430053591728 MULTI CID FTMS 0 0 0 9123 88708.0859375 1.0 0 0.0 4 Unmodified _ALNEEAGRLLL_ chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;ENSG00000108106|ENST00000264552|UBE2S 46.0223103267499 0.1396584557920269 6 [{I|L}A]NEEA 6 5 59.966 0.0 0.0 5.0069 0.0 0.0 0.0 567.3629244440061 567.3629244440061 38.88357838612024 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.3807196863200844 + [{I|L}A]NEEA 5.0069 + + 144 + 1 1.499 41389.1 0.4300000071525574 3481 5644 9123 SUDHL4_400M_050219_2,9127 SUDHL4_400M_050219_2,9127,ALNEEAGRLLL False True ALNEEAGRLLL 50.95077 599.843005359173 387761.6875 9123.0 chr19:55404147-55404288|48|16.1|0.85|4.24|-|ENST00000587845|UBE2S,UBE2S;;ENSG00000108106|ENST00000264552|UBE2S 5.756855328877767 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9129 50.969 800.0 95087.0 25 0 11212.0 -1 0 96 1035.161324675002 3102.4621446252067 3 1035.495532214642 MULTI CID FTMS 0 0 0 9128 54851.23828125 0.0470149206057202 -5 0.1714820861816406 1 6 {[NV]|[RG]}[SG]PPPPP 9 -1 27.492 0.0 0.0 0.88612 0.0 0.0 0.0 2257.0068583305374 2257.0068583305374 17.007090898747744 0.0 0.0 0.0 0 0.0 0.0 0.2887254899964357 0.2887254899964357 {[NV]|[RG]}[SG]PPPPP 0.88612 - 902 1 1.499 57728.1 0.4199999868869781 3482 5645 9128 SUDHL4_400M_050219_2,9129 SUDHL4_400M_050219_2,9129, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9131 50.975 185.0 528150.0 25 0 58339.0 -1 0 87 915.4422141848364 1828.869875436473 2 915.4435302615166 MULTI CID FTMS 0 0 0 9130 292911.46875 0.4472074200088858 5 -0.2580642700195312 1 6 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V] 15 -1 + 94.012 0.0 0.0 5.1404 5.1404 84.034 0.0 0.0 0.0 16.648508211874187 68.95008331093186 16.648508211874187 9.030899869919438 0 0.2887254899964357 2.0 0.0 0.7302046884880937 {[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQGGA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQNA{M(Oxidation (M))|F}Y[AG][{I|L}V];[YQ]VEEAQQNA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQQGGA{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEAQ[AG]NA{M(Oxidation (M))|F}Y[AG][{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG][AG]NA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}YEEA[AG]QGGA{M(Oxidation (M))|F}YQ[{I|L}V] 5.1404;4.6466;4.6466;4.6466;4.6466;4.2115;4.1538;4.1538;4.1538;4.1538 -;-;-;-;-;-;-;-;-;- 3864 1 1.499 70487.8 1.0 3483 5646 9130 SUDHL4_400M_050219_2,9131 SUDHL4_400M_050219_2,9131, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9132 50.978 160.0 251730.0 25 0 57984.0 + 44388 YLTNEGIQYL 10 58 607.308169464353 1212.601785995506 2 607.3086425662041 MULTI CID FTMS 0 0 0 9130 348448.09375 0.4728714476771564 -3 0.0903358459472656 2 Unmodified _YLTNEGIQYL_ chr6:34425221-34425583|48|67.1|0.0|22.68|-|ENST00000494077|RPS10-NUDT3,RPS10;ENSG00000124614|ENST00000648437|RPS10;ENST00000408001.1_1_6:34712123-34712447:+|nuORF;ENST00000439253.1_1_9:90631298-90631598:+|nuORF;ENST00000440748.1_1_7:37415149-37415623:+|nuORF;ENST00000480942.1_1_6:34392413-34392935:-|nuORF 36.12702656103203 0.1984647928738587 6 [Y{I|L}]Q{[ES]|[DT]|[{I|L}C]}G{I|L} 7 5 37.113 0.0 0.0 3.0606 0.0 0.0 0.0 419.1932526305247 419.1932526305247 1.217549328077709 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3807196863200844 0.9247425010840048 [Y{I|L}]Q{[ES]|[DT]|[{I|L}C]}G{I|L} 3.0606 - 372 1 1.499 37925.7 1.0 3484 5646 9130 SUDHL4_400M_050219_2,9132 SUDHL4_400M_050219_2,9132,YLTNEGIQYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9133 50.981 147.0 270210.0 25 0 52399.0 + 33948 SLHIDSIQL 9 77 513.2849927146387 1024.5554324960774 2 513.2850219607353 MULTI CID FTMS 0 0 0 9130 290738.65625 0.1996783944955979 5 -0.2580642700195312 3 Unmodified _SLHIDSIQL_ REV__ENSG00000137842|ENST00000260403|TMEM62;REV__ENST00000570109.1_1_15:43426051-43427957:+|nuORF 34.10243960390752 0.1078313939113124 6 {[TV]|[{I|L}S]}HVTVEQ{I|L} 9 -1 + 61.978 0.0 0.0 6.0492 6.0492 89.557 0.0 0.0 0.0 20.737862141609185 38.33256749368834 20.737862141609185 9.719712763997563 0 0.5317183090963749 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}HVTVEQ{I|L};{[TV]|[{I|L}S]}HVE{[TV]|[{I|L}S]}Q{I|L};{[TV]|[{I|L}S]}HD{I|L}{[TV]|[{I|L}S]}Q{I|L};[HS]{I|L}VTVEQ{I|L};[HS]V{I|L}TVEQ{I|L};[HS]{I|L}VE{[TV]|[{I|L}S]}Q{I|L};[HS]{I|L}D{I|L}{[TV]|[{I|L}S]}Q{I|L};[HS]V{I|L}E{[TV]|[{I|L}S]}Q{I|L};[HS]VE{I|L}{[TV]|[{I|L}S]}Q{I|L} 6.0492;5.1006;4.8067;3.8034;3.1379;2.8547;2.5609;2.1893;1.8954 -;-;-;-;-;-;-;-;- 314 1 1.499 34031.2 1.0 3485 5646 9130 SUDHL4_400M_050219_2,9133 SUDHL4_400M_050219_2,9133,SLHIDSIQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9134 50.992 655.0 131540.0 25 0 27428.0 + 20461 LLKQVYITSV 10 85 582.3534639734253 1162.6923750136505 2 582.3535644412041 MULTI CID FTMS 0 0 0 9130 133478.296875 0.2296995555408325 -3 0.0903358459472656 4 Unmodified _LLKQVYITSV_ REV__ENST00000312719.9_1_6:114489590-114549805:-|nuORF 3.944395688203298 0.708391353636983 6 W 1 -1 3.9794 0.0 0.0 0.34226 0.0 0.0 756.4821221833755 217.10836206607652 973.590484249452 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 W 0.34226 - 5 + 1 1.499 71748.0 1.0 3486 5646 9130 SUDHL4_400M_050219_2,9134 SUDHL4_400M_050219_2,9134,LLKQVYITSV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9135 51.006 800.0 96558.0 25 0 12472.0 + 40998 VMAPRTLLL 9 107 507.31288195838096 1012.611210983562 2 507.3130065798759 MULTI CID FTMS 0 0 0 9130 103350.1171875 1.0 0 0.0 5 Unmodified _VMAPRTLLL_ ENSG00000206503|ENST00000376809|HLA-A;ENST00000463348.5_1_6:30227401-30227711:+|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A 26.268140514670165 0.1969607489560049 6 VMA 3 6 54.693 0.0 0.0 5.4012 0.0 0.0 0.0 708.4420758416577 708.4420758416577 33.529455342775165 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + VMA 5.4012 + + 344 + 1 1.499 63410.9 0.4300000071525574 3487 5646 9130 SUDHL4_400M_050219_2,9135 SUDHL4_400M_050219_2,9135,VMAPRTLLL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9136 51.018 664.0 272410.0 25 0 46681.0 + 40377 VIAEILRGV 9 124 485.3082985942934 968.6020442553868 2 485.3084289431572 MULTI CID FTMS 0 0 0 9130 98264.828125 0.0577577974852846 -4 0.1191291809082031 6 Unmodified _VIAEILRGV_ ENSG00000101361|ENST00000329276|NOP56 47.74868867922204 0.0453060283459952 6 V{I|L}AE{I|L}{I|L}RGV 9 0 + 84.642 0.0 0.0 8.7386 8.7386 97.94 0.0 0.0 0.0 56.89546114081072 4.688783660666374 4.688783660666374 29.06295947543776 0 1.3494850021680094 2.0 0.3807196863200844 0.3807196863200844 + + V{I|L}AE{I|L}{I|L}RGV;V{I|L}VDV{I|L}RGV 8.7386;5.7381 +;- + 541 + 1 1.499 137695.3 1.0 3488 5646 9130 SUDHL4_400M_050219_2,9136 SUDHL4_400M_050219_2,9136,VIAEILRGV True True VIAEILRGV 51.017547 485.308428943157 16547122.0 9130.0 ENSG00000101361|ENST00000329276|NOP56 5.538386980692546 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9138 51.023 90.0 574870.0 25 0 29899.0 + 25437 NEFPEPIKL 9 90 543.7950051663605 1085.575457399521 2 543.7951537966728 MULTI CID FTMS 0 0 0 9137 373173.0625 0.6347801089150878 4 -0.2090225219726562 1 Unmodified _NEFPEPIKL_ ENSG00000075785|ENST00000265062|RAB7A 32.78568957990786 0.1150597335874693 6 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}H 4 6 32.042 0.0 0.0 2.9516 0.0 0.0 0.0 555.3301320423521 555.3301320423521 19.32189212264124 0.0 0.0 0.0 0 1.0 0.0 0.5941876774005248 0.4417509724019616 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}H 2.9516 - 109 1 1.499 44136.6 1.0 3489 5647 9137 SUDHL4_400M_050219_2,9138 SUDHL4_400M_050219_2,9138,NEFPEPIKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9139 51.037 800.0 152600.0 25 0 6231.0 -1 0 118 1029.82952579839 3086.4667479953705 3 1030.165942370892 MULTI CID FTMS 0 0 0 9137 193121.078125 0.3075871596775107 -2 0.0667762756347656 2 6 [MN]MV{I|L}[EP][MN]{I|L} 10 -1 55.176 0.0 0.0 1.7877 0.0 0.0 0.0 1910.8841036432248 1910.8841036432248 29.15517019442889 0.0 0.0 0.0 0 0.5 2.0 0.3252574989159953 0.4247425010840047 [MN]MV{I|L}[EP][MN]{I|L} 1.7877 - 384 + 1 1.499 86430.0 0.5 3490 5647 9137 SUDHL4_400M_050219_2,9139 SUDHL4_400M_050219_2,9139, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9140 51.051 800.0 135030.0 25 0 31928.0 27533 PKTKLLCKHL 10 94 590.8667754933705 1179.7189980535409 2 590.8670532107353 MULTI CID FTMS 0 0 0 9137 129459.640625 0.5329261343663969 -2 0.0667762756347656 3 Unmodified _PKTKLLCKHL_ ENST00000519016.5_2_8:133771146-133772850:-|nuORF;ENST00000519187.5_2_8:133771681-133772790:-|nuORF;ENST00000519304.1_2_8:133771146-133772790:-|nuORF 0.6268255596534771 0.7237370565709429 6 {I|L} 1 9 8.7236 0.0 0.0 0.73947 0.0 0.0 1048.6235981285392 0.0 1048.6235981285392 0.0 6.249387366082999 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.73947 + + 4 + 1 1.499 82751.5 0.5199999809265137 3491 5647 9137 SUDHL4_400M_050219_2,9140 SUDHL4_400M_050219_2,9140,PKTKLLCKHL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9141 51.065 800.0 145980.0 25 0 18894.0 + 1572 ALLDWSIHGW 10 124 599.3036041472334 1196.592655361267 2 599.3032714724541 MULTI CID FTMS 0 0 0 9137 93473.1640625 0.8493904009076775 -1 0.049041748046875 4 Unmodified _ALLDWSIHGW_ REV__ENSG00000181038|ENST00000341249|METTL23;REV__ENST00000589581.1_1_17:74725774-74729332:+|nuORF;REV__nc|ENSG00000181038|Q86XA0-2|METTL23 19.256988751693697 0.5244284437930726 6 [{I|L}A]{I|L}DW{I|L}QE 8 -1 63.994 0.0 0.0 5.3481 0.0 0.0 0.0 225.08838831119377 225.08838831119377 31.810070757400894 0.0 0.0 0.0 0 0.7134679910804405 2.0 0.6989700043360187 0.0 [{I|L}A]{I|L}DW{I|L}QE 5.3481 - 865 + 1 1.499 87112.6 0.4399999976158142 3492 5647 9137 SUDHL4_400M_050219_2,9141 SUDHL4_400M_050219_2,9141,ALLDWSIHGW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9142 51.079 800.0 105710.0 25 0 12425.0 + 29712 QPKHKREKL 9 104 388.5713776002648 1162.6923034009944 3 388.5712158083916 MULTI CID FTMS 0 0 0 9137 82958.2890625 0.3997015862700926 -2 0.0667762756347656 5 Unmodified _QPKHKREKL_ REV__ENSG00000204954|ENST00000378090|UQCC6;REV__ENST00000543740.6_1_12:104345303-104359310:-|nuORF;REV__ENST00000552460.1_1_12:104345303-104349535:-|nuORF 1.844237919475145 0.850302753031785 6 {I|L} 1 -1 8.4518 0.0 0.0 0.72692 0.0 0.0 1031.5979715912272 0.0 1031.5979715912272 0.0 5.352905371428536 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.72692 + + 9 + 1 1.499 76060.9 0.3499999940395355 3493 5647 9137 SUDHL4_400M_050219_2,9142 SUDHL4_400M_050219_2,9142,QPKHKREKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9144 51.096 800.0 154780.0 25 0 10874.0 -1 0 100 1016.1422177278198 3045.404823783659 3 1016.476855456829 MULTI CID FTMS 0 0 0 9143 225024.09375 0.5327608395234255 -2 0.1102561950683593 1 6 D{[{M(Oxidation (M))|F}D]|MM}HAD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 8 -1 21.86 0.0 0.0 0.71779 0.0 0.0 2067.029372908768 0.0 2067.029372908768 0.0 1.4144127238045456 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 D{[{M(Oxidation (M))|F}D]|MM}HAD{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 0.71779 - 162 1 1.499 91696.9 0.4900000095367431 3494 5648 9143 SUDHL4_400M_050219_2,9144 SUDHL4_400M_050219_2,9144, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9145 51.099 147.0 384810.0 25 0 26752.0 -1 YIDDTLTMV 9 87 543.7553229704 1085.4960930076 2 543.7553588747978 MULTI CID FTMS 0 0 0 9143 349035.34375 1.0 0 0.0 2 Oxidation (M) _YIDDTLTM(Oxidation (M))V_ ENSG00000278311|ENST00000613102|GGNBP2;nc|ENSG00000278311|Q9H3C7-2|GGNBP2;nc|ENSG00000278311|Q9H3C7-3|GGNBP2 24.67388899826682 0.2172451872415813 6 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}H 4 -1 20.124 0.0 0.0 1.8539 0.0 0.0 0.0 555.2509507558999 555.2509507558999 8.134614378569278 0.0 0.0 0.0 0 0.0 0.0 0.5941876774005248 0.4489700043360188 {[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}H 1.8539 - 197 1 1.499 47913.3 1.0 3495 5648 9143 SUDHL4_400M_050219_2,9145 SUDHL4_400M_050219_2,9145,YIDDTLTMV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9146 51.102 103.0 413370.0 25 0 48764.0 + 1453 ALESFLKQV 9 81 517.7974234304453 1033.5802939276905 2 517.7978393435478 MULTI CID FTMS 0 0 0 9143 271791.96875 0.912837290152525 -1 0.0612144470214843 3 Unmodified _ALESFLKQV_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 25.399314129420983 0.2080152500878129 6 [{I|L}A]H{I|L} 4 6 33.188 0.0 0.0 3.2109 0.0 0.0 0.0 596.2923965490373 596.2923965490373 20.79634550210361 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]H{I|L} 3.2109 - 134 1 1.499 35842.6 1.0 3496 5648 9143 SUDHL4_400M_050219_2,9146 SUDHL4_400M_050219_2,9146,ALESFLKQV False True ALESFLKQV 51.101654 517.797839343548 1586224.375 9143.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 4.104455629984538 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9148 51.118 800.0 122480.0 25 0 4954.6 -1 0 109 1010.8113507839164 3029.412222951949 3 1011.48106688261 MULTI CID FTMS 0 0 0 9147 191078.0625 0.972520810711554 -2 0.0841064453125 1 6 [MN][YG]H[MN]GG 9 -1 39.727 0.0 0.0 1.3114 0.0 0.0 0.0 2065.016032205337 2065.016032205337 22.90484985457369 0.0 0.0 0.0 0 0.8807196863200843 2.0 0.0 0.3807196863200844 [MN][YG]H[MN]GG 1.3114 - 713 + 1 1.499 67965.8 0.4900000095367431 3497 5649 9147 SUDHL4_400M_050219_2,9148 SUDHL4_400M_050219_2,9148, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9149 51.122 237.0 160880.0 25 0 13587.0 + 34088 SLLGGDVVSV 10 79 473.26612045250255 944.5176879718052 2 473.2655517458916 MULTI CID FTMS 0 0 0 9147 158662.015625 1.0 0 0.0 2 Unmodified _SLLGGDVVSV_ nc|ENSG00000157514|Q99576|TSC22D3 25.399314129420983 0.3980215340001851 6 [VS]N{I|L}E 5 8 24.521 0.0 0.0 2.5961 0.0 0.0 0.0 399.2231682786989 399.2231682786989 6.984615597275404 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3807196863200844 0.0 [VS]N{I|L}E 2.5961 - 129 1 1.499 35139.4 1.0 3498 5649 9147 SUDHL4_400M_050219_2,9149 SUDHL4_400M_050219_2,9149,SLLGGDVVSV False True False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 9150 51.135 702.0 120090.0 25 0 10143.0 + 44427 YMIAHITGL 9 111 509.77302946894514 1017.5315060046904 2 509.7733337283134 MULTI CID FTMS 0 0 0 9147 97556.0234375 1.0 0 0.0 3 Unmodified _YMIAHITGL_ chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;ENSG00000176890|ENST00000323274|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF;nc|ENSG00000176890|P04818-2|TYMS;nc|ENSG00000176890|P04818-3|TYMS 53.57557251787612 0.0325303259649373 6 YM{I|L}T 4 5 54.285 0.0 0.0 5.3349 0.0 0.0 0.0 506.2877291315063 506.2877291315063 14.314089937453431 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.805462187404089 0.0 YM{I|L}T 5.3349 - 432 + 1 1.499 69521.6 1.0 3499 5649 9147 SUDHL4_400M_050219_2,9150 SUDHL4_400M_050219_2,9150,YMIAHITGL True True YMIAHITGL 51.134658 509.773333728313 423317.75 9147.0 ENSG00000176890|ENST00000323274|TYMS;;nc|ENSG00000176890|P04818-3|TYMS;;chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;;nc|ENSG00000176890|P04818-2|TYMS;;ENST00000581920.1_1_18:667730-672994:+|nuORF 6.063775380452474 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9151 51.147 733.0 119410.0 25 0 16678.0 -1 FLDGNEMTL 9 113 528.2391968424547 1054.4638407517093 2 528.2396728396416 MULTI CID FTMS 0 0 0 9147 112885.265625 0.1776588493061754 -4 0.1508827209472656 4 Oxidation (M) _FLDGNEM(Oxidation (M))TL_ ENSG00000169504|ENST00000374379|CLIC4 28.486842064014134 0.1687311288560894 6 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[WN]|[YH]}{M(Oxidation (M))|F}T{I|L} 8 -1 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[WN]|[YH]}{M(Oxidation (M))|F} + + 17.945 7.8141 0.95025 1.7018 1.7018 50.145 0.0 0.0 0.0 0.0 5.0329843725243215 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[WN]|[YH]}{M(Oxidation (M))|F}T{I|L} 1.7018 - 222 + 1 1.499 71211.3 1.0 3500 5649 9147 SUDHL4_400M_050219_2,9151 SUDHL4_400M_050219_2,9151,FLDGNEMTL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9152 51.161 800.0 119670.0 25 0 33510.0 + -1 VVPPFLQPE 9 60 1025.486380436982 3073.437311911146 3 1025.822070300579 MULTI CID FTMS 0 0 0 9147 108957.96875 1.0 0 0.0 5 P02666 6 Q[EP] 3 -1 15.19 0.0 0.0 0.49422 0.0 0.0 2701.273171141418 0.0 2701.273171141418 0.0 2.538012203482298 0.0 0.0 0 0.0 0.0 0.75 0.3252574989159953 Q[EP] 0.49422 - 128 + 1 1.499 68296.8 0.449999988079071 3501 5649 9147 SUDHL4_400M_050219_2,9152 SUDHL4_400M_050219_2,9152, False False VVPPFLQPE 51.16125 1025.82207030058 961602.3125 9147.0 P02666 2.750113368034363 1.0 False 9.0 True unknown PXD020620_cell_line SUDHL4_400M_050219_2 9154 51.166 30.0 589470.0 25 0 54911.0 + 1565 ALLDRIVSV 9 44 493.3056083870522 984.5966638409044 2 493.3057739138603 MULTI CID FTMS 0 0 0 9153 1791900.5 0.7622648989958878 1 -0.0653190612792968 1 Unmodified _ALLDRIVSV_ ENSG00000155561|ENST00000285968|NUP205 14.838274106304384 0.4350285940865338 6 [{I|L}A]{I|L} 3 6 33.952 0.0 0.0 3.4484 0.0 0.0 0.0 684.3674410455686 684.3674410455686 22.16968830971778 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + [{I|L}A]{I|L} 3.4484 + + 8 + 1 1.499 22823.6 1.0 3502 5650 9153 SUDHL4_400M_050219_2,9154 SUDHL4_400M_050219_2,9154,ALLDRIVSV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9155 51.168 84.0 500670.0 25 0 61520.0 + 41083 VNHYEALLL 9 84 536.2969673709729 1070.5793818087457 2 536.2955200076103 MULTI CID FTMS 0 0 0 9153 304361.1875 0.3643742669160387 3 -0.1329803466796875 2 Unmodified _VNHYEALLL_ REV__ENST00000391785.7_1_19:53087386-53087446:+|nuORF 26.88365393820708 0.1891292719743517 6 {I|L}[NS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}S{I|L} 7 -1 22.582 0.0 0.0 2.1093 0.0 0.0 244.18602350972063 0.0 244.18602350972063 0.0 3.3733394349369945 0.0 0.0 0 0.0 0.0 1.1022338482433751 0.0 {I|L}[NS]{M(Oxidation (M))|F}{M(Oxidation (M))|F}S{I|L} 2.1093 - 124 + 1 1.499 38183.8 1.0 3503 5650 9153 SUDHL4_400M_050219_2,9155 SUDHL4_400M_050219_2,9155,VNHYEALLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9156 51.173 252.0 336270.0 25 0 40844.0 + + 28661 RLYTEPLLV 9 75 552.3266339099916 1102.6387148867832 2 552.3267089724541 MULTI CID FTMS 0 0 0 9153 264159.96875 0.8177653910267256 -2 0.082489013671875 3 Unmodified _PVLSHEPLLV_ nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT;nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;ENSG00000124155|ENST00000279036|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT 30.63653989081413 0.2803493085145199 6 EP{I|L}{I|L}V 5 -1 48.513 0.0 0.0 4.3998 0.0 0.0 533.2939320294937 0.0 533.2939320294937 0.0 33.45175337211302 0.0 0.0 0 1.2059771852360797 0.0 0.0 0.0 EP{I|L}{I|L}V 4.3998 + + 72 1 1.499 73776.4 1.0 3504 5650 9153 SUDHL4_400M_050219_2,9156 SUDHL4_400M_050219_2,9156,PVLSHEPLLV False False RLYTEPLLV 51.172775 552.326708972454 2041275.375 9153.0 nc|ENSG00000124155|Q969N2-2|PIGT;;nc|ENSG00000124155|Q969N2-6|PIGT;;nc|ENSG00000124155|Q969N2-3|PIGT;;nc|ENSG00000124155|Q969N2-4|PIGT;;ENSG00000124155|ENST00000279036|PIGT;;nc|ENSG00000124155|Q969N2-5|PIGT 5.1702219645182295 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9157 51.187 800.0 82587.0 25 0 26731.0 + 7836 ELKQRPSRRR 10 80 663.3979082808758 1324.7812636285514 2 663.3987914919853 MULTI CID FTMS 0 0 0 9153 129023.046875 0.7689628250164037 -1 0.0595970153808593 4 Unmodified _ELKQRPSRRR_ REV__nc|ENSG00000086712|Q9NUQ3-2|TXLNG 3.2813086475875832 0.7114585191678878 6 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F} 4 -1 15.864 0.0 0.0 1.1975 0.0 0.0 0.0 861.525775917867 861.525775917867 4.443666746188434 0.0 0.0 0.0 0 0.0 0.744727494896694 0.0 0.0 {[QN]|[E{I|L}]|[KN]}A{M(Oxidation (M))|F} 1.1975 - 62 1 1.499 69293.2 0.5299999713897705 3505 5650 9153 SUDHL4_400M_050219_2,9157 SUDHL4_400M_050219_2,9157,ELKQRPSRRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9158 51.196 512.0 157920.0 25 0 10829.0 + 1946 AMLPSITNV 9 123 481.2553106138927 960.4960682945854 2 481.2551452517509 MULTI CID FTMS 0 0 0 9153 98842.1015625 0.7063103056255439 -2 0.082489013671875 5 Oxidation (M) _AM(Oxidation (M))LPSITNV_ ENSG00000196367|ENST00000456197|TRRAP;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP 50.855029805455786 0.0384952370514206 6 {I|L}[PS]{I|L}{[CP]|[EA]} 6 5 22.593 0.0 0.0 2.3522 0.0 0.0 332.1686279643104 0.0 332.1686279643104 0.0 4.316723847870204 0.0 0.0 0 0.2614393726401688 0.0 0.7302046884880937 0.0 {I|L}[PS]{I|L}{[CP]|[EA]} 2.3522 - 239 + 1 1.499 65847.4 1.0 3506 5650 9153 SUDHL4_400M_050219_2,9158 SUDHL4_400M_050219_2,9158,AMLPSITNV True False AMLPSITNV 51.195644 481.255145251751 907610.3125 9153.0 nc|ENSG00000196367|Q9Y4A5|TRRAP;;ENSG00000196367|ENST00000456197|TRRAP;;nc|ENSG00000196367|Q9Y4A5-2|TRRAP 6.86704953511556 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9159 51.209 800.0 119060.0 25 0 13924.0 33810 SLDPLYNQV 9 128 524.7676379626718 1047.5207229921434 2 524.7672607302666 MULTI CID FTMS 0 0 0 9153 97665.3984375 1.0 0 0.0 6 Unmodified _SLDPLYNQV_ ENSG00000101098|ENST00000372851|RIMS4;nc|ENSG00000101098|Q9H426-2|RIMS4 7.910154910731844 0.6385446671287552 6 {M(Oxidation (M))|F}{I|L}SKVGK 7 8 46.618 0.0 0.0 4.4503 0.0 0.0 270.04417377514966 0.0 270.04417377514966 0.0 34.83481277603319 0.0 0.0 0 0.805462187404089 0.0 0.7742275032520141 0.1549471895720985 {M(Oxidation (M))|F}{I|L}SKVGK 4.4503 - 144 + 1 1.499 79541.4 0.449999988079071 3507 5650 9153 SUDHL4_400M_050219_2,9159 SUDHL4_400M_050219_2,9159,SLDPLYNQV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9160 51.223 800.0 60541.0 25 0 14859.0 -1 MPRKRRDAKRR 11 73 743.4344576965027 1484.854362459805 2 743.9374267458916 MULTI CID FTMS 0 0 0 9153 84618.3515625 0.9190079296964788 -1 0.0595970153808593 7 Oxidation (M) _M(Oxidation (M))PRKRRDAKRR_ ENST00000294119.6_1_11:62444064-62444232:-|nuORF 1.1933415558491238 0.8695176722560516 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.499 45513.9 0.4199999868869781 3508 5650 9153 SUDHL4_400M_050219_2,9160 SUDHL4_400M_050219_2,9160,MPRKRRDAKRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9161 51.227 164.0 306400.0 25 0 19702.0 -1 0 71 881.9067372048643 1761.7989214765284 2 881.9081909060478 MULTI CID FTMS 0 0 0 9153 355768.78125 0.2278039719839918 11 -0.4259376525878906 8 6 Y{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L} 12 -1 66.896 0.0 0.0 3.797 0.0 0.0 358.22648602906594 0.0 358.22648602906594 0.0 53.18549420653092 0.0 0.0 0 0.3252574989159953 0.0 0.805462187404089 0.3807196863200844 Y{M(Oxidation (M))|F}ADQQA[CS]C(Carbamidomethyl (C))V{I|L} 3.797 - 1607 + 1 1.499 42195.4 1.0 3509 5650 9153 SUDHL4_400M_050219_2,9161 SUDHL4_400M_050219_2,9161, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9163 51.231 96.0 339280.0 25 0 41029.0 -1 0 49 1035.161324675002 3102.4621446252067 3 1035.497363269329 MULTI CID FTMS 0 0 0 9162 759309.625 0.6508309174623916 1 -0.0081405639648437 1 6 VM{[QD]|[EN]|[WG]|[KD]|[RS]} 4 -1 21.198 0.0 0.0 0.68326 0.0 0.0 2611.217066805735 0.0 2611.217066805735 0.0 14.208187539523747 0.0 0.0 0 0.5 0.0 0.0 0.0 VM{[QD]|[EN]|[WG]|[KD]|[RS]} 0.68326 - 32 1 1.499 31614.3 1.0 3510 5651 9162 SUDHL4_400M_050219_2,9163 SUDHL4_400M_050219_2,9163, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9164 51.235 169.0 199230.0 25 0 51180.0 + 44389 YLTNEGIQYL 10 53 607.308169464353 1212.601785995506 2 607.3084594607353 MULTI CID FTMS 0 0 0 9162 297907.03125 0.4042832538537639 2 -0.0676612854003906 2 Unmodified _YLTNEGIQYL_ chr6:34425221-34425583|48|67.1|0.0|22.68|-|ENST00000494077|RPS10-NUDT3,RPS10;ENSG00000124614|ENST00000648437|RPS10;ENST00000408001.1_1_6:34712123-34712447:+|nuORF;ENST00000439253.1_1_9:90631298-90631598:+|nuORF;ENST00000440748.1_1_7:37415149-37415623:+|nuORF;ENST00000480942.1_1_6:34392413-34392935:-|nuORF 25.399314129420983 0.3980215340001851 6 [Y{I|L}]Q{[ES]|[DT]|[{I|L}C]}G 6 6 29.627 0.0 0.0 2.4432 0.0 0.0 0.0 532.2757721617746 532.2757721617746 13.428637390930264 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.3494850021680094 0.4247425010840047 [Y{I|L}]Q{[ES]|[DT]|[{I|L}C]}G 2.4432 - 74 1 1.499 32884.3 1.0 3511 5651 9162 SUDHL4_400M_050219_2,9164 SUDHL4_400M_050219_2,9164,YLTNEGIQYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9166 51.241 171.0 268280.0 25 0 56370.0 + 31689 RRLRLYTVS 9 59 582.3534639734253 1162.6923750136505 2 582.3534423708916 MULTI CID FTMS 0 0 0 9165 287758.125 0.4951959604164175 3 -0.1371726989746093 1 Unmodified _RRLRLYTVS_ REV__ENSG00000130751|ENST00000602212|NPAS1 0.5247636613948944 0.8963649302248013 6 P 1 -1 1.1092 0.0 0.0 0.095403 0.0 0.0 964.574285269313 98.03789697818593 1062.6121822474988 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.095403 - 2 + 1 1.499 45768.1 1.0 3512 5652 9165 SUDHL4_400M_050219_2,9166 SUDHL4_400M_050219_2,9166,RRLRLYTVS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9167 51.245 211.0 329310.0 25 0 71025.0 + 20384 LLGPRLVLA 9 72 476.3211677308881 950.6277825285762 2 476.3210937380791 MULTI CID FTMS 0 0 0 9165 313043.90625 0.0367662009621762 -7 0.2839393615722656 2 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 39.957323273325 0.0756908302845263 6 {I|L}{I|L}G 3 6 48.5 0.0 0.0 5.1019 0.0 0.0 0.0 664.4171846979124 664.4171846979124 27.04628427264403 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 + {I|L}{I|L}G 5.1019 + + 42 + 1 1.499 61220.7 1.0 3513 5652 9165 SUDHL4_400M_050219_2,9167 SUDHL4_400M_050219_2,9167,LLGPRLVLA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9168 51.249 257.0 225630.0 25 0 38029.0 + 42901 VVPPFLQPE 9 87 513.2863519743005 1024.5581510154009 2 513.2866088747978 MULTI CID FTMS 0 0 0 9165 239497.609375 0.8724377718782405 -2 0.0734596252441406 3 Unmodified _VVPPFLQPE_ CON__P02666 20.453626601364224 0.2830276176381075 6 VVQQQVVPE 9 5 + 54.159 0.0 0.0 5.2861 5.2861 83.281 0.0 0.0 0.0 8.916229564830864 41.9408341705779 8.916229564830864 6.989700043360188 0 1.1549471895720984 2.0 0.0 0.4247425010840047 VVQQQVVPE;VV{[WT]|[RM]}PVVPE;VVQQ[AG]VVPE;{[HG]|PP}{M(Oxidation (M))|F}{I|L}QVVPE;[{I|L}A]G{[NV]|[RG]}QVVPE;{[TV]|[{I|L}S]}{[RE]|[WV]}PVVPE;{[HG]|PP}{M(Oxidation (M))|F}{I|L}[AG]VVPE;[Q{I|L}]{[NV]|[RG]}QVVPE;[{I|L}A]G{[NV]|[RG]}[AG]VVPE;[TP][KQ]QVVPE 5.2861;4.6039;4.3874;3.7294;3.1494;3.1125;2.4161;2.3357;2.2549;2.0419 -;-;-;-;-;-;-;-;-;- 287 1 1.499 50760.7 1.0 3514 5652 9165 SUDHL4_400M_050219_2,9168 SUDHL4_400M_050219_2,9168,VVPPFLQPE False True False False contaminant PXD020620_cell_line SUDHL4_400M_050219_2 9169 51.257 433.0 232330.0 25 0 21106.0 + 29434 QLFSEIHNL 9 129 550.7915191334292 1099.5684853336584 2 550.7912475466728 MULTI CID FTMS 0 0 0 9165 230028.5 0.7851055766840588 -1 0.0081405639648437 4 Unmodified _QLFSEIHNL_ ENSG00000136861|ENST00000349780|CDK5RAP2;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2 62.57269311338072 0.0246576765497938 6 [Q{I|L}]{M(Oxidation (M))|F}SE{I|L}HN{I|L} 9 0 + 61.036 0.0 0.0 5.5509 5.5509 80.661 0.0 0.0 0.0 22.37643016799588 3.0102999566398125 3.0102999566398125 3.0102999566398125 0 0.5629529932484498 1.5228787452803376 0.3252574989159953 1.285666875892183 + + [Q{I|L}]{M(Oxidation (M))|F}SE{I|L}HN{I|L};[Q{I|L}]{M(Oxidation (M))|F}SE{I|L}H{I|L}N;[Q{I|L}]{M(Oxidation (M))|F}[HV]{[ET]|[MV]}N{I|L};[Q{I|L}]{M(Oxidation (M))|F}SE{I|L}HGG{I|L};[Q{I|L}]{M(Oxidation (M))|F}[HV]{[ET]|[MV]}{I|L}N;[Q{I|L}]{M(Oxidation (M))|F}S[HV]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L};[Q{I|L}]{M(Oxidation (M))|F}C[KT][{M(Oxidation (M))|F}T]{I|L};[Q{I|L}]{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}[H{I|L}]C{I|L};[Q{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}VVHN{I|L};[Q{I|L}]{[YD]|[{M(Oxidation (M))|F}M]}VVH{I|L}N 5.5509;5.2771;3.6102;3.5442;3.3364;3.2147;3.0089;2.2298;1.7456;1.4718 +;-;-;-;-;-;-;-;-;- + 2414 + 1 1.499 80059.3 1.0 3515 5652 9165 SUDHL4_400M_050219_2,9169 SUDHL4_400M_050219_2,9169,QLFSEIHNL True True QLFSEIHNL 51.257102 550.791247546673 1739579.0 9165.0 nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;;ENST00000483412.5_1_9:123170580-123298708:-|nuORF;;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;;ENSG00000136861|ENST00000349780|CDK5RAP2;;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2 6.643811384836833 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9170 51.263 294.0 173770.0 25 0 17377.0 + -1 YMIAHITGL 9 96 517.7706192612974 1033.526685589395 2 517.7709838747978 MULTI CID FTMS 0 0 0 9165 110268.96875 0.4391803998430523 2 -0.099151611328125 5 Oxidation (M) _YM(Oxidation (M))IAHITGL_ ENSG00000176890|ENST00000323274|TYMS;nc|ENSG00000176890|P04818-3|TYMS;chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;nc|ENSG00000176890|P04818-2|TYMS;ENST00000581920.1_1_18:667730-672994:+|nuORF 30.22481116460888 0.1466181017706357 6 [{I|L}A]H{I|L} 4 -1 30.177 0.0 0.0 2.9198 0.0 0.0 0.0 596.2392459744134 596.2392459744134 14.195384736937404 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 [{I|L}A]H{I|L} 2.9198 + + 217 1 1.499 46435.7 1.0 3516 5652 9165 SUDHL4_400M_050219_2,9170 SUDHL4_400M_050219_2,9170,YMIAHITGL False False YMIAHITGL 51.262504 517.770983874798 1207814.5 9165.0 ENSG00000176890|ENST00000323274|TYMS;;nc|ENSG00000176890|P04818-3|TYMS;;chr18:657947-669072|47|21.02|0.94|4.49|+|ENST00000323250|TYMS,TYMS;;nc|ENSG00000176890|P04818-2|TYMS;;ENST00000581920.1_1_18:667730-672994:+|nuORF 5.22036091486613 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9171 51.272 551.0 153260.0 25 0 18025.0 + 30963 RLALFNPDV 9 106 522.7961965910603 1043.5778402489204 2 522.7955200076103 MULTI CID FTMS 0 0 0 9165 104492.6328125 0.439296682931687 -1 0.0081405639648437 6 Unmodified _RLALFNPDV_ ENSG00000189043|ENST00000339600|NDUFA4;ENST00000486007.1_1_7:10977674-10979684:-|nuORF 41.8396318013385 0.0653578398400075 6 [R{I|L}]A{I|L}{M(Oxidation (M))|F}NPDV 9 0 + 42.135 0.0 0.0 4.0376 4.0376 81.836 0.0 0.0 0.0 1.5398434942549954 9.215657699383527 1.5398434942549954 9.208187539523747 0 0.6822333069283655 0.0 0.0 0.7742275032520141 + + [R{I|L}]A{I|L}{M(Oxidation (M))|F}NPDV;[R{I|L}]A{I|L}{M(Oxidation (M))|F}GGPDV;[R{I|L}]A{I|L}{M(Oxidation (M))|F}YYV;[R{I|L}]A{I|L}{[ES]|[DT]|[{I|L}C]}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V;[R{I|L}]A{I|L}[MN]{I|L}DV;[R{I|L}]N[WK]QTV 4.0376;3.1552;2.4282;1.0834;0.9696;0.11794 +;-;-;-;-;- + 181 1 1.499 75912.2 1.0 3517 5652 9165 SUDHL4_400M_050219_2,9171 SUDHL4_400M_050219_2,9171,RLALFNPDV True True RLALFNPDV 51.272191 522.79552000761 1358103.875 9165.0 ENST00000486007.1_1_7:10977674-10979684:-|nuORF;;ENSG00000189043|ENST00000339600|NDUFA4 6.470175584157308 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9172 51.28 462.0 312450.0 25 0 26462.0 -1 0 85 914.435371267919 1826.8561896026376 2 914.937060534954 MULTI CID FTMS 0 0 0 9165 153632.671875 0.444983352878073 -3 0.133056640625 7 6 [YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}YKV{I|L} 15 -1 + 94.645 0.0 0.0 5.1808 5.1808 57.92 0.0 0.0 0.0 3.3824456429974674 70.46388461952553 3.3824456429974674 0.0 0 0.9489700043360187 0.0 0.0 1.9291746928241125 [YQ]{M(Oxidation (M))|F}[HA]AQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EA[AG]QNA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EA[AG]QNA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQ[AG]NA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQGGA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ][EP]EAQQGGA{M(Oxidation (M))|F}YKV{I|L} 5.1808;5.1808;5.1808;4.6864;4.6864;4.6864;4.6864;4.6864;4.6864;4.6864 -;-;-;-;-;-;-;-;-;- 2255 1 1.499 98164.3 1.0 3518 5652 9165 SUDHL4_400M_050219_2,9172 SUDHL4_400M_050219_2,9172, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9173 51.294 800.0 97902.0 25 0 11384.0 -1 0 71 666.3404088278965 1995.999397083889 3 666.6754028201103 MULTI CID FTMS 0 0 0 9165 118862.7109375 1.0 0 0.0 8 6 {I|L}H{I|L}Q{[CP]|[EA]} 6 -1 35.111 0.0 0.0 1.7591 0.0 0.0 1286.5877781359764 0.0 1286.5877781359764 0.0 6.598630062565064 0.0 0.0 0 0.6694451763165201 0.0 0.0 0.0 {I|L}H{I|L}Q{[CP]|[EA]} 1.7591 - 124 1 1.499 68676.2 0.4799999892711639 3519 5652 9165 SUDHL4_400M_050219_2,9173 SUDHL4_400M_050219_2,9173, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9175 51.3 90.0 407980.0 25 0 68648.0 + 40378 VIAEILRGV 9 51 485.3082985942934 968.6020442553868 2 485.3083679080009 MULTI CID FTMS 0 0 0 9174 559427.625 0.3288186433432868 3 -0.0929412841796875 1 Unmodified _VIAEILRGV_ ENSG00000101361|ENST00000329276|NOP56 24.020572477871973 0.2255576514309169 6 [{I|L}V]AE{I|L}{I|L} 6 3 53.461 0.0 0.0 5.5194 0.0 0.0 0.0 327.1800325983032 327.1800325983032 46.01342204748164 0.0 0.0 0.0 0 0.805462187404089 2.0 0.0 0.0 + [{I|L}V]AE{I|L}{I|L} 5.5194 + + 25 + 1 1.499 36708.5 1.0 3520 5653 9174 SUDHL4_400M_050219_2,9175 SUDHL4_400M_050219_2,9175,VIAEILRGV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9176 51.314 800.0 41426.0 25 0 2166.9 -1 0 60 1029.492119170097 3085.454528110492 3 1030.165698230267 MULTI CID FTMS 0 0 0 9174 36026.9765625 0.1483082651271308 -6 0.2766838073730469 2 6 V 1 -1 6.9897 0.0 0.0 0.22654 0.0 0.0 2402.1298953974047 581.2299287848392 2983.359824182244 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.22654 - 21 + 1 1.499 31732.9 0.9900000095367432 3521 5653 9174 SUDHL4_400M_050219_2,9176 SUDHL4_400M_050219_2,9176, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9177 51.32 336.0 245510.0 25 0 51358.0 + 34064 SLLEKSLGL 9 103 480.29215052907534 958.5697481249508 2 480.2924072146416 MULTI CID FTMS 0 0 0 9174 179876.53125 0.0741626928033218 -7 0.3257255554199219 3 Unmodified _SLLEKSLGL_ ENSG00000124802|ENST00000379715|EEF1E1;nc|ENSG00000124802|O43324-2|EEF1E1 51.629811660486645 0.0367964933207742 6 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 7 3 57.044 0.0 0.0 5.9509 0.0 0.0 0.0 328.18837540450073 328.18837540450073 42.79190296351902 0.0 0.0 0.0 0 1.0 2.0 0.7614393726401688 0.0 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 5.9509 - 603 1 1.499 68888.5 1.0 3522 5653 9174 SUDHL4_400M_050219_2,9177 SUDHL4_400M_050219_2,9177,SLLEKSLGL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9178 51.334 800.0 70410.0 25 0 8157.8 + 37773 TLSDIMVSL 9 91 497.7596583958127 993.5047638584252 2 497.7601196169853 MULTI CID FTMS 0 0 0 9174 130783.125 1.0 0 0.0 4 Oxidation (M) _TLSDIM(Oxidation (M))VSL_ ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10 50.855029805455786 0.0384952370514206 6 {[TV]|[{I|L}S]}DT{I|L}{M(Oxidation (M))|F} 6 5 40.164 0.0 0.0 4.0426 0.0 0.0 0.0 314.17032299204635 314.17032299204635 7.310450018512924 0.0 0.0 0.0 0 0.0 1.3010299956639813 1.174742501084005 0.0 {[TV]|[{I|L}S]}DT{I|L}{M(Oxidation (M))|F} 4.0426 - 287 1 1.499 50117.0 0.4900000095367431 3523 5653 9174 SUDHL4_400M_050219_2,9178 SUDHL4_400M_050219_2,9178,TLSDIMVSL True False TLSDIMVSL 51.333863 497.760119616985 545467.625 9174.0 ENSG00000136891|ENST00000374902|TEX10;;nc|ENSG00000136891|Q9NXF1-2|TEX10 4.464564323425293 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9180 51.35 800.0 83571.0 25 0 13523.0 19484 LFIFRMKLL 9 83 590.8667754933705 1179.7189980535409 2 590.8669311404228 MULTI CID FTMS 0 0 0 9179 55199.06640625 0.2272293120736202 5 -0.1230316162109375 1 Unmodified _LFIFRMKLL_ ENST00000467604.5_1_3:118931398-118931611:-|nuORF 2.9952420565917617 0.8101217823238775 6 [{I|L}A]G{M(Oxidation (M))|F}[RV]NEY 9 6 22.941 0.0 0.0 1.9446 0.0 0.0 0.0 127.17344076277836 127.17344076277836 11.347295501327611 0.0 0.0 0.0 0 0.0 0.8538719643217619 0.0 0.0 [{I|L}A]G{M(Oxidation (M))|F}[RV]NEY 1.9446 - 138 1 1.499 53834.6 0.4199999868869781 3524 5654 9179 SUDHL4_400M_050219_2,9180 SUDHL4_400M_050219_2,9180,LFIFRMKLL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9181 51.358 439.0 216400.0 25 0 27453.0 + 20481 LLLDMQNRL 9 81 566.3126414263074 1130.6107299194148 2 566.3132812380791 MULTI CID FTMS 0 0 0 9179 154633.734375 0.5063844016216075 -1 0.0396308898925781 2 Oxidation (M) _LLLDM(Oxidation (M))QNRL_ ENSG00000167986|ENST00000301764|DDB1;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;ENST00000538470.2_1_11:61067610-61070684:-|nuORF;ENST00000545894.1_1_11:61069637-61069871:-|nuORF;nc|ENSG00000167986|Q16531-2|DDB1 56.17704186161178 0.0281986971544335 6 {I|L}{I|L}{I|L}D{M(Oxidation (M))|F}QNR{I|L} 9 0 + 97.503 0.0 0.0 8.6239 8.6239 93.628 0.0 0.0 0.0 72.30835659879972 10.747534640495177 10.747534640495177 9.208187539523747 0 0.4247425010840047 2.0 0.3807196863200844 1.055462187404089 + + {I|L}{I|L}{I|L}D{M(Oxidation (M))|F}QNR{I|L};{I|L}{I|L}{I|L}D{M(Oxidation (M))|F}QGGR{I|L};{I|L}{I|L}{I|L}D{M(Oxidation (M))|F}[AG]NR{I|L};{I|L}{I|L}{I|L}D{M(Oxidation (M))|F}[AG]GGR{I|L};{I|L}{I|L}[YE][NP]NR{I|L} 8.6239;7.8094;7.8094;6.9989;5.1722 +;-;-;-;- + 289 + 1 1.499 77154.1 1.0 3525 5654 9179 SUDHL4_400M_050219_2,9181 SUDHL4_400M_050219_2,9181,LLLDMQNRL True False LLLDMQNRL 51.358047 566.313281238079 1317539.375 9179.0 ENST00000545894.1_1_11:61069637-61069871:-|nuORF;;ENSG00000167986|ENST00000301764|DDB1;;nc|ENSG00000167986|Q16531-2|DDB1;;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;;ENST00000538470.2_1_11:61067610-61070684:-|nuORF 5.396108309427897 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9182 51.372 800.0 145090.0 25 0 13262.0 + 18319 KVLDLRINL 9 128 542.3482097263684 1082.6818665195367 2 542.3478881716728 MULTI CID FTMS 0 0 0 9179 130311.9375 1.0 0 0.0 3 Unmodified _KVLDLRINL_ ENSG00000129003|ENST00000644861|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;nc|ENSG00000129003|Q709C8-4|VPS13C 46.0223103267499 0.0490911897871712 6 KV{I|L}D{I|L}[RN]{I|L}{I|L} 9 2 + 72.929 0.0 0.0 6.736 6.736 82.787 0.0 0.0 0.0 34.777069965251854 10.63486257521106 10.63486257521106 2.0289375146764854 0 1.579689690656103 1.154901959985743 0.0 0.0 KV{I|L}D{I|L}[RN]{I|L}{I|L};KV{I|L}D{I|L}[R{I|L}]N{I|L};KV{I|L}D{I|L}[R{I|L}]GG{I|L};K{I|L}VD{I|L}[RN]{I|L}{I|L};K{I|L}VD{I|L}[R{I|L}]N{I|L};K{I|L}VD{I|L}[R{I|L}]GG{I|L} 6.736;6.5486;5.4448;4.5659;4.3785;3.2747 -;+;-;-;-;- + 1159 + 1 1.499 91667.8 0.5199999809265137 3526 5654 9179 SUDHL4_400M_050219_2,9182 SUDHL4_400M_050219_2,9182,KVLDLRINL True True KVLDLRINL 51.371878 542.347888171673 488770.375 9179.0 nc|ENSG00000129003|Q709C8-3|VPS13C;;ENSG00000129003|ENST00000644861|VPS13C;;nc|ENSG00000129003|Q709C8-4|VPS13C;;nc|ENSG00000129003|Q709C8-2|VPS13C 4.022158066431682 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9184 51.38 284.0 252080.0 25 0 36730.0 -1 LEDDCYYI 8 104 545.7215141873197 1089.428475441439 2 545.7221557497978 MULTI CID FTMS 0 0 0 9183 299686.15625 0.7735660408954499 2 -0.0369033813476562 1 Carbamidomethyl (C) _LEDDC(Carbamidomethyl (C))YYI_ ENSG00000005302|ENST00000312196|MSL3;ENST00000494268.1_1_X:11778342-11782058:+|nuORF;nc|ENSG00000005302|Q8N5Y2-2|MSL3;nc|ENSG00000005302|Q8N5Y2-3|MSL3;nc|ENSG00000005302|Q8N5Y2-4|MSL3;nc|ENSG00000005302|Q8N5Y2-5|MSL3;nc|ENSG00000005302|Q8N5Y2-6|MSL3;nc|ENSG00000224287|P0C860|MSL3B 8.593279151180031 0.7721714526254883 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}T[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}DD 9 -1 + 29.51 0.0 0.0 2.7087 2.7087 80.896 0.0 0.0 0.0 7.442190502882163 0.915149811213503 0.915149811213503 12.730012720637376 0 0.0 2.0 0.2396518287104437 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}T[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}DD;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[H{I|L}]{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}DD;[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]H[H{I|L}]{M(Oxidation (M))|F}DD;[C(Carbamidomethyl (C)){M(Oxidation (M))|F}]H{[{M(Oxidation (M))|F}H]|[RQ]}DD{I|L} 2.7087;1.5402;0.14723;0.096084 -;-;-;- 250 1 1.499 55749.7 1.0 3527 5655 9183 SUDHL4_400M_050219_2,9184 SUDHL4_400M_050219_2,9184,LEDDCYYI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9185 51.387 419.0 96267.0 25 0 8886.1 -1 0 51 1016.1422177278198 3045.404823783659 3 1016.478381335735 MULTI CID FTMS 0 0 0 9183 150552.390625 0.3564436886955963 5 -0.13299560546875 2 6 [NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}PRA 8 -1 14.275 0.0 0.0 0.46874 0.0 0.0 0.0 2115.9330579968027 2115.9330579968027 5.691446804494909 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 [NP]{I|L}{[YD]|[{M(Oxidation (M))|F}M]}PRA 0.46874 - 75 1 1.499 38113.0 1.0 3528 5655 9183 SUDHL4_400M_050219_2,9185 SUDHL4_400M_050219_2,9185, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9187 51.395 203.0 220440.0 25 0 32862.0 + -1 FLDGNEMTL 9 72 528.2391968424547 1054.4638407517093 2 528.2395507693291 MULTI CID FTMS 0 0 0 9186 295459.21875 0.4649937662759216 3 -0.0697212219238281 1 Oxidation (M) _FLDGNEM(Oxidation (M))TL_ ENSG00000169504|ENST00000374379|CLIC4 21.74664581756881 0.2544899275067181 6 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[WN]|[YH]}{M(Oxidation (M))|F}T{I|L} 8 -1 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[WN]|[YH]}{M(Oxidation (M))|F} + + 17.945 5.6518 0.68729 1.7018 1.7018 50.145 0.0 0.0 0.0 0.0 7.460762528683702 0.0 0.0 0 0.0 0.0 0.3252574989159953 0.0 {NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}{[WN]|[YH]}{M(Oxidation (M))|F}T{I|L} 1.7018 - 59 + 1 1.499 39334.6 1.0 3529 5656 9186 SUDHL4_400M_050219_2,9187 SUDHL4_400M_050219_2,9187,FLDGNEMTL False False FLDGNEMTL 51.394921 528.239550769329 6761003.0 9186.0 ENSG00000169504|ENST00000374379|CLIC4 2.926991959412893 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9188 51.409 800.0 12973.0 25 0 2113.5 -1 0 22 1050.1706174959108 3147.490023087933 3 1050.507861316204 MULTI CID FTMS 0 0 0 9186 67321.734375 1.0 0 0.0 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 1 1 1.499 19145.6 0.3600000143051147 3530 5656 9186 SUDHL4_400M_050219_2,9188 SUDHL4_400M_050219_2,9188, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9191 51.429 800.0 107020.0 25 0 11097.0 + 14124 ALLDRIVSV 9 113 493.3056083870522 984.5966638409044 2 493.3057433962822 MULTI CID FTMS 0 0 0 9190 117568.8984375 0.0500131812522619 9 -0.3925590515136719 1 Unmodified _IAVERVISV_ ENSG00000155561|ENST00000285968|NUP205 38.17557092003332 0.0854718145212029 6 [{I|L}A]{I|L}D 4 6 38.5 0.0 0.0 3.9102 0.0 0.0 0.0 569.3413790338499 569.3413790338499 6.501290800069125 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 [{I|L}A]{I|L}D 3.9102 - 130 + 1 1.499 71542.1 0.4199999868869781 3531 5658 9190 SUDHL4_400M_050219_2,9191 SUDHL4_400M_050219_2,9191,IAVERVISV True True ALLDRIVSV 51.4292 493.305743396282 23028888.0 9190.0 ENSG00000155561|ENST00000285968|NUP205 5.73675553003947 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9192 51.443 800.0 167980.0 25 0 27306.0 + 33661 RLFEGNALL 9 137 516.7960366704311 1031.5775204076622 2 516.7945434451103 MULTI CID FTMS 0 0 0 9190 98291.0859375 0.4540420786319298 -2 0.0256729125976562 2 Unmodified _SITQRMAII_ ENSG00000170889|ENST00000302907|RPS9 29.081581746732265 0.1611639662936252 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REGNA{I|L}{I|L} 9 5 + 70.143 0.0 0.0 6.7996 6.7996 87.238 0.0 0.0 0.0 12.730012720637376 16.478174818886373 12.730012720637376 6.478174818886373 0 0.8494850021680094 1.0 0.3054621874040891 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REGNA{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RWNA{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}REGGGA{I|L}{I|L};[{I|L}A]T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GNA{I|L}{I|L};[R{I|L}]{M(Oxidation (M))|F}EGNA{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}RWGGA{I|L}{I|L};[{I|L}A]H{[HG]|PP}SNA{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}[DN]NA{I|L}{I|L};[{I|L}A]T{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGGA{I|L}{I|L};{[TV]|[{I|L}S]}T[{I|L}T]SNA{I|L}{I|L} 6.7996;6.1716;5.907;5.5656;5.4888;5.2738;5.2294;4.888;4.6772;4.6056 -;-;-;-;-;-;-;-;-;- 815 1 1.499 106219.9 0.4199999868869781 3532 5658 9190 SUDHL4_400M_050219_2,9192 SUDHL4_400M_050219_2,9192,SITQRMAII False False RLFEGNALL 51.443031 516.79454344511 1267916.125 9190.0 ENSG00000170889|ENST00000302907|RPS9 5.190933545430501 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9193 51.457 800.0 48264.0 25 0 14363.0 -1 0 49 1043.8328666808616 3128.4767706427847 3 1044.504931628704 MULTI CID FTMS 0 0 0 9190 68245.65625 0.8363026712265423 -2 0.0256729125976562 3 6 PP 2 -1 7.9588 0.0 0.0 0.2544 0.0 0.0 2480.151710683604 451.19492517642817 2931.346635860032 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.2544 - 32 + 1 1.499 31575.9 0.3700000047683716 3533 5658 9190 SUDHL4_400M_050219_2,9193 SUDHL4_400M_050219_2,9193, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9195 51.466 341.0 174570.0 25 0 16012.0 -1 ITHQSLLML 9 104 536.2969673709729 1070.5793818087457 2 536.8019897341728 MULTI CID FTMS 0 0 0 9194 91535.0234375 0.1708496816925751 12 -0.4860000610351562 1 Oxidation (M) _ITHQSLLM(Oxidation (M))L_ ENSG00000126749|ENST00000599672|EMG1 14.838274106304384 0.4350285940865338 6 [{I|L}V]{[RE]|[WV]}{I|L}EN[QA] 9 -1 + 25.81 0.0 0.0 2.4108 2.4108 72.802 0.0 0.0 0.0 0.1136207544312348 3.50369453742179 0.1136207544312348 3.5218251811136234 0 0.0 2.0 0.0 0.0 [{I|L}V]{[RE]|[WV]}{I|L}EN[QA];{[QN]|[E{I|L}]|[KN]}[RV]{I|L}EN[QA];{I|L}{I|L}[RD]{I|L}EN[QA];{[QN]|[E{I|L}]|[KN]}NVQV{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}NVQ{I|L}V{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]};{[QN]|[E{I|L}]|[KN]}NV[RK]N[QA];[{I|L}V]{[RE]|[WV]}{I|L}EGG[QA];{[QN]|[E{I|L}]|[KN]}[RV]{I|L}EGG[QA];{I|L}{I|L}[RD]{I|L}EGG[QA];[{I|L}V][WH]{M(Oxidation (M))|F}{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.4108;2.0819;2.0671;1.8435;1.8435;1.684;1.5507;1.2217;1.207;1.0361 -;-;-;-;-;-;-;-;-;- 682 1 1.499 48711.2 1.0 3534 5659 9194 SUDHL4_400M_050219_2,9195 SUDHL4_400M_050219_2,9195,ITHQSLLML False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9196 51.477 664.0 125670.0 25 0 11658.0 + 9490 FLDHIIASV 9 118 507.784795366959 1013.555037800718 2 507.7851440310478 MULTI CID FTMS 0 0 0 9194 103961.2890625 0.541744340038586 -1 0.0440483093261718 2 Unmodified _FLDHIIASV_ ENSG00000120733|ENST00000314358|KDM3B;nc|ENSG00000120733|Q7LBC6-2|KDM3B;nc|ENSG00000120733|Q7LBC6-3|KDM3B 54.773552608820026 0.0299037012502309 6 [H{I|L}]D{M(Oxidation (M))|F}{I|L}{I|L}ASV 9 2 + 70.877 0.0 0.0 6.9929 6.9929 81.462 0.0 0.0 0.0 0.7918124604762511 16.478174818886373 0.7918124604762511 0.7918124604762511 0 0.7742275032520141 1.0 0.25 0.0 [H{I|L}]D{M(Oxidation (M))|F}{I|L}{I|L}ASV;[HD]{I|L}{M(Oxidation (M))|F}{I|L}{I|L}ASV;[H{I|L}]D{M(Oxidation (M))|F}{I|L}A{I|L}SV;[HD]{I|L}{M(Oxidation (M))|F}{I|L}A{I|L}SV;[H{I|L}]D{I|L}{M(Oxidation (M))|F}{I|L}ASV;[HD]{I|L}{I|L}{M(Oxidation (M))|F}{I|L}ASV;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}{I|L}ASV;[H{I|L}]D{I|L}{M(Oxidation (M))|F}A{I|L}SV;[HD]{I|L}{I|L}{M(Oxidation (M))|F}A{I|L}SV;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L}A{I|L}SV 6.9929;6.9148;6.4254;6.3472;6.1523;6.0741;5.7544;5.5847;5.5066;5.1869 -;-;-;-;-;-;-;-;-;- 867 1 1.499 75918.9 1.0 3535 5659 9194 SUDHL4_400M_050219_2,9196 SUDHL4_400M_050219_2,9196,FLDHIIASV True True FLDHIIASV 51.477167 507.785144031048 916481.9375 9194.0 nc|ENSG00000120733|Q7LBC6-3|KDM3B;;ENSG00000120733|ENST00000314358|KDM3B;;nc|ENSG00000120733|Q7LBC6-2|KDM3B 5.514089266459147 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9197 51.491 800.0 119270.0 25 0 7112.9 -1 0 99 1010.1397058774472 3027.397288232541 3 1010.471972644329 MULTI CID FTMS 0 0 0 9194 120327.9375 1.0 0 0.0 3 6 {I|L}NTDE[W{I|L}] 7 -1 40.322 0.0 0.0 1.3319 0.0 0.0 2137.9786003436725 0.0 2137.9786003436725 0.0 20.585003915861645 0.0 0.0 0 0.0 0.0 1.411954370472159 0.9247425010840048 {I|L}NTDE[W{I|L}] 1.3319 - 690 + 1 1.499 73568.9 0.4600000083446502 3536 5659 9194 SUDHL4_400M_050219_2,9197 SUDHL4_400M_050219_2,9197, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9198 51.505 800.0 60302.0 25 0 20066.0 -1 0 59 1024.158415325248 3069.453416575944 3 1024.497119128704 MULTI CID FTMS 0 0 0 9194 71969.234375 0.7623937180901852 -2 0.0481071472167968 4 6 Q 1 -1 7.7866 0.0 0.0 0.25368 0.0 0.0 2289.000426929263 649.3748262994749 2938.375253228738 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 Q 0.25368 - 52 + 1 1.499 38646.0 0.3700000047683716 3537 5659 9194 SUDHL4_400M_050219_2,9198 SUDHL4_400M_050219_2,9198, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9200 51.51 6.3 6181500.0 25 0 1383700.0 + 20385 LLGPRLVLA 9 52 476.3211677308881 950.6277825285762 2 476.3213683962822 MULTI CID FTMS 0 0 0 9199 8400240.0 0.9865865643903164 1 -0.0823097229003906 1 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 42.09456458481378 0.0639583784996157 6 {I|L}{I|L}C 3 7 47.619 0.0 0.0 5.0093 0.0 0.0 0.0 618.4091890924436 618.4091890924436 29.17612793400544 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L}C 5.0093 - 29 + 1 1.499 36452.8 1.0 3538 5660 9199 SUDHL4_400M_050219_2,9200 SUDHL4_400M_050219_2,9200,LLGPRLVLA True True LLGPRLVLA 51.509664 476.321368396282 51701000.0 9199.0 ENSG00000170348|ENST00000303575|TMED10 0.5063629622260729 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9201 51.524 800.0 71130.0 25 0 10064.0 -1 SFRRKLCLLRH 11 79 743.4344576965027 1484.854362459805 2 743.4349243044853 MULTI CID FTMS 0 0 0 9199 54746.4765625 0.4526696275112168 9 -0.388641357421875 2 Carbamidomethyl (C) _SFRRKLC(Carbamidomethyl (C))LLRH_ ENSG00000197362|ENST00000491431|ZNF786;nc|ENSG00000197362|Q8N393-2|ZNF786 1.3295316138638542 0.8688751186870782 6 {[CP]|[EA]}T{M(Oxidation (M))|F} 4 -1 18.94 0.0 0.0 1.2756 0.0 0.0 0.0 1033.6356179131835 1033.6356179131835 1.2146938501479063 0.0 0.0 0.0 0 0.0 0.0 0.9247425010840048 0.0 {[CP]|[EA]}T{M(Oxidation (M))|F} 1.2756 - 105 1 1.499 49715.3 0.4199999868869781 3539 5660 9199 SUDHL4_400M_050219_2,9201 SUDHL4_400M_050219_2,9201,SFRRKLCLLRH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9202 51.534 593.0 185490.0 25 0 32342.0 + 11799 GLLTEIRAV 9 125 486.2973884391162 970.5802239450323 2 486.2971984744072 MULTI CID FTMS 0 0 0 9199 127212.7421875 0.3704705088453897 -2 0.0920333862304687 3 Unmodified _GLLTEIRAV_ ENSG00000164543|ENST00000319357|STK17A 53.832793166522166 0.0319663582346103 6 {[VA]|[{I|L}G]}{I|L}TE{I|L}RG{I|L} 9 2 + 76.135 0.0 0.0 7.8443 7.8443 85.895 0.0 0.0 0.0 11.294629739549492 2.6091277245599827 2.6091277245599827 2.6091277245599827 0 1.7302046884880935 2.0 0.7742275032520141 0.3252574989159953 {[VA]|[{I|L}G]}{I|L}TE{I|L}RG{I|L};{[VA]|[{I|L}G]}{I|L}TE{I|L}RAV;[{I|L}A]VTE{I|L}RG{I|L};[{I|L}A]VTE{I|L}RAV;[{I|L}T]{I|L}GE{I|L}RG{I|L};{[VA]|[{I|L}G]}{I|L}TW[{I|L}V]G{I|L};[{I|L}T]{I|L}GE{I|L}RAV;[{I|L}A]{I|L}SE{I|L}RG{I|L};[{I|L}A]{I|L}SE{I|L}RAV;[{I|L}A]{I|L}ES{I|L}RG{I|L} 7.8443;7.5755;5.6358;5.3669;4.9307;4.8455;4.6619;4.629;4.3602;3.5665 -;+;-;-;-;-;-;-;-;- + 1029 + 1 1.499 88441.4 1.0 3540 5660 9199 SUDHL4_400M_050219_2,9202 SUDHL4_400M_050219_2,9202,GLLTEIRAV True True GLLTEIRAV 51.53387 486.297198474407 1533279.5 9199.0 ENSG00000164543|ENST00000319357|STK17A 4.262724717458089 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9203 51.541 403.0 129600.0 25 0 7409.1 + 43234 WASPPGRWL 9 88 535.2821652374256 1068.549777541651 2 535.2830688357353 MULTI CID FTMS 0 0 0 9199 116901.4453125 1.0 0 0.0 4 Unmodified _WASPPGRWL_ nc|ENSG00000213402|Q14761|PTPRCAP 12.872603262515298 0.4882369880199512 6 WASP 4 5 57.735 0.0 0.0 5.4031 0.0 0.0 0.0 624.3262249998955 624.3262249998955 46.625853418640375 0.0 0.0 0.0 0 0.8807196863200843 1.6989700043360187 0.0 0.0 + WASP 5.4031 + + 74 + 1 1.499 45320.0 1.0 3541 5660 9199 SUDHL4_400M_050219_2,9203 SUDHL4_400M_050219_2,9203,WASPPGRWL False True WASPPGRWL 51.541079 535.283068835735 1177840.5 9199.0 nc|ENSG00000213402|Q14761|PTPRCAP 3.8551605542500815 2.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 9204 51.555 800.0 75744.0 25 0 8230.3 10947 GALGSNQLMPL 11 101 550.7915191334292 1099.5684853336584 2 550.7919799685478 MULTI CID FTMS 0 0 0 9199 92525.765625 0.3157978014861188 7 -0.3005256652832031 5 Unmodified _GALGSNQLMPL_ ENST00000494848.1_1_9:116155725-116163557:-|nuORF 16.149105407346934 0.6992268271266642 6 [Q{I|L}]{M(Oxidation (M))|F}CP{M(Oxidation (M))|F} 6 8 29.161 0.0 0.0 2.6521 0.0 0.0 0.0 361.1878426748169 361.1878426748169 7.282154411336634 0.0 0.0 0.0 0 0.2742275032520141 1.3979400086720375 0.0 0.0 [Q{I|L}]{M(Oxidation (M))|F}CP{M(Oxidation (M))|F} 2.6521 - 419 + 1 1.499 52776.1 0.4399999976158142 3542 5660 9199 SUDHL4_400M_050219_2,9204 SUDHL4_400M_050219_2,9204,GALGSNQLMPL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9205 51.558 171.0 224280.0 25 0 13918.0 -1 0 65 881.9067372048643 1761.7989214765284 2 881.9119140505791 MULTI CID FTMS 0 0 0 9199 279404.4375 0.1789067619390873 21 -0.6687088012695312 6 6 [YQ]V[CS]AQQDA[Y{M(Oxidation (M))|F}]Q[{I|L}V] 15 -1 + 51.99 0.0 0.0 2.951 2.951 73.765 0.0 0.0 0.0 1.921617582078632 41.53266562845701 1.921617582078632 3.679767852945943 0 0.8807196863200843 0.0 0.0 0.6861818737241735 [YQ]V[CS]AQQDA[Y{M(Oxidation (M))|F}]Q[{I|L}V];[YQ]V{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQDA[Y{M(Oxidation (M))|F}]Q[{I|L}V];[YQ]V[CS]AQQW[Y{M(Oxidation (M))|F}]Q[{I|L}V];[YQ]V{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}QQW[Y{M(Oxidation (M))|F}]Q[{I|L}V] 2.951;2.7421;2.5712;2.3636 -;-;-;- 937 1 1.499 32908.5 1.0 3543 5660 9199 SUDHL4_400M_050219_2,9205 SUDHL4_400M_050219_2,9205, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9206 51.572 800.0 103020.0 25 0 13453.0 -1 0 91 1035.161324675002 3102.4621446252067 3 1035.496997058392 MULTI CID FTMS 0 0 0 9199 214227.828125 0.1836221869630182 10 -0.4056015014648437 7 6 PPPPP 5 -1 21.058 0.0 0.0 0.67874 0.0 0.0 2260.0361551598835 354.14280115299067 2614.178956312874 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPPP 0.67874 - 1694 + 1 1.499 63350.8 0.6299999952316284 3544 5660 9199 SUDHL4_400M_050219_2,9206 SUDHL4_400M_050219_2,9206, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9207 51.587 800.0 43466.0 25 0 1544.3 -1 0 55 1198.2269806892182 3591.659112667855 3 1198.562304675579 MULTI CID FTMS 0 0 0 9199 75940.9140625 1.0 0 0.0 8 6 E 1 -1 6.9897 0.0 0.0 0.19461 0.0 0.0 2334.0866772203926 1125.4961641901002 3459.5828414104926 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.19461 - 10 + 1 1.499 29969.2 0.3400000035762787 3545 5660 9199 SUDHL4_400M_050219_2,9207 SUDHL4_400M_050219_2,9207, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9209 51.592 34.0 1188900.0 25 0 290700.0 + 15812 ISGLSIVSLA 10 59 480.29215052907534 958.5697481249508 2 480.2920410037041 MULTI CID FTMS 0 0 0 9208 1369512.875 0.5646471050615117 1 -0.052032470703125 1 Unmodified _ISGLSIVSLA_ REV__ENSG00000280165|ENST00000409204|PCDH20 36.12702656103203 0.1984647928738587 6 {[TV]|[{I|L}S]}G{I|L}S{I|L}G 7 -1 61.19 0.0 0.0 6.3835 0.0 0.0 0.0 328.18678849043823 328.18678849043823 48.97176992505884 0.0 0.0 0.0 0 0.5 2.0 1.1989700043360187 0.0 {[TV]|[{I|L}S]}G{I|L}S{I|L}G 6.3835 - 102 1 1.499 36510.0 1.0 3546 5661 9208 SUDHL4_400M_050219_2,9209 SUDHL4_400M_050219_2,9209,ISGLSIVSLA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9210 51.606 800.0 82325.0 25 0 5266.4 -1 0 76 914.435371267919 1826.8561896026376 2 914.9387695193292 MULTI CID FTMS 0 0 0 9208 25177.564453125 0.0729245733405647 6 -0.2182159423828125 2 6 [KT]QY[W{M(Oxidation (M))|F}]QQA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 14 -1 + 42.228 0.0 0.0 2.3115 2.3115 50.62 0.0 0.0 0.0 21.057291669019165 8.498930767443895 8.498930767443895 0.0 0 0.3054621874040891 0.0 0.0 0.0 [KT]QY[W{M(Oxidation (M))|F}]QQA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L};[KT]KY[W{M(Oxidation (M))|F}]QQA[HA]{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 2.3115;2.3115 -;- 593 + 1 1.499 50318.7 0.5099999904632568 3547 5661 9208 SUDHL4_400M_050219_2,9210 SUDHL4_400M_050219_2,9210, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9211 51.608 105.0 781710.0 25 0 134320.0 + 37890 TLWGIQKEL 9 99 544.3117510333221 1086.6089491334442 2 544.3112060427666 MULTI CID FTMS 0 0 0 9208 485117.53125 0.2826369501248436 -4 0.1784019470214843 3 Unmodified _TLWGIQKEL_ ENSG00000134333|ENST00000422447|LDHA;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA 53.832793166522166 0.0319663582346103 6 [{I|L}T]WG{I|L}QKE{I|L} 9 0 + 66.181 0.0 0.0 6.0906 6.0906 88.545 0.0 0.0 0.0 23.12900515715583 22.66425238575109 22.66425238575109 9.208187539523747 0 0.6989700043360187 2.0 1.079689690656103 0.7302046884880937 + + [{I|L}T]WG{I|L}QKE{I|L};[{I|L}T]WG{I|L}[AG]KE{I|L};[{I|L}T][NG]{I|L}GW{I|L}T{I|L};{[VA]|[{I|L}G]}QWKE{I|L}T{I|L};{[VA]|[{I|L}G]}AGWKE{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}{[QN]|[E{I|L}]|[KN]}KE{I|L}T{I|L};{[VA]|[{I|L}G]}WQKE{I|L}T{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}QKE{I|L}T{I|L};{[VA]|[{I|L}G]}QKWE{I|L}T{I|L};[Q{I|L}]GWKE{I|L}T{I|L} 6.0906;5.2432;4.5601;4.4494;4.2728;4.2224;4.1724;3.9531;3.8953;3.8838 +;-;-;-;-;-;-;-;-;- + 494 + 1 1.499 65273.6 1.0 3548 5661 9208 SUDHL4_400M_050219_2,9211 SUDHL4_400M_050219_2,9211,TLWGIQKEL True True TLWGIQKEL 51.60808 544.311206042767 18877042.0 9208.0 nc|ENSG00000134333|P00338-4|LDHA;;nc|ENSG00000134333|P00338-3|LDHA;;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;;ENSG00000134333|ENST00000422447|LDHA;;ENST00000538451.1_1_11:18424358-18428825:+|nuORF 5.180449724197388 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9212 51.612 200.0 329460.0 25 0 68778.0 + 33875 SLFGGSVKL 9 77 454.2658713259554 906.5171897187108 2 454.2658874392509 MULTI CID FTMS 0 0 0 9208 262893.59375 0.3475161991323615 -2 0.1302947998046875 4 Unmodified _SLFGGSVKL_ ENSG00000170248|ENST00000307296|PDCD6IP;ENST00000477798.5_1_3:33840175-33866683:+|nuORF;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 26.268140514670165 0.1969607489560049 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[SG]VK{I|L} 9 0 + 47.145 0.0 0.0 5.2007 5.2007 75.554 0.0 0.0 0.0 33.95750937337162 6.655462488490684 6.655462488490684 0.4575749056067479 0 0.7302046884880937 2.0 0.0 0.0 + + {[TV]|[{I|L}S]}{M(Oxidation (M))|F}G[SG]VK{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[NS]VK{I|L} 5.2007;5.1502 +;- + 97 + 1 1.499 58504.6 1.0 3549 5661 9208 SUDHL4_400M_050219_2,9212 SUDHL4_400M_050219_2,9212,SLFGGSVKL False True SLFGGSVKL 51.611899 454.265887439251 7706178.5 9208.0 ENST00000477798.5_1_3:33840175-33866683:+|nuORF;;ENSG00000170248|ENST00000307296|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP 5.285481770833333 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9213 51.616 244.0 277950.0 25 0 52804.0 + 9465 FLDDVVHSL 9 82 522.7717509611992 1043.5289489891984 2 522.7719604372978 MULTI CID FTMS 0 0 0 9208 153420.515625 0.5647568906817911 -1 0.0823097229003906 5 Unmodified _FLDDVVHSL_ ENSG00000171988|ENST00000399262|JMJD1C;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C 71.13359017698441 0.0206607516130725 6 {M(Oxidation (M))|F}{I|L}DDVVHS{I|L} 9 0 + 64.127 0.0 0.0 6.1452 6.1452 91.472 0.0 0.0 0.0 39.35972531752853 17.998081742177057 17.998081742177057 16.34466159091083 0 0.6421590589602533 0.0 1.5044321917401078 0.0 + + {M(Oxidation (M))|F}{I|L}DDVVHS{I|L};[{I|L}A][RN]VDD{I|L}E;[HV]T{[CP]|[EA]}[{M(Oxidation (M))|F}V]{I|L}E;[HV]T[PS][YV]{I|L}E;[HV]S[DV][{M(Oxidation (M))|F}V]{I|L}E;[HV]S[TP][YV]{I|L}E;[HS]{I|L}{[CP]|[EA]}[{M(Oxidation (M))|F}V]{I|L}E;{M(Oxidation (M))|F}{I|L}[{M(Oxidation (M))|F}V]{[CP]|[EA]}[YR];[HS]{I|L}[PS][YV]{I|L}E;[HS]V[DV][{M(Oxidation (M))|F}V]{I|L}E 6.1452;4.5789;3.0816;2.9251;2.7003;2.5437;2.1233;2.0795;1.9668;1.742 +;-;-;-;-;-;-;-;-;- + 416 + 1 1.499 57319.7 1.0 3550 5661 9208 SUDHL4_400M_050219_2,9213 SUDHL4_400M_050219_2,9213,FLDDVVHSL True True FLDDVVHSL 51.616468 522.771960437298 1465422.75 9208.0 nc|ENSG00000171988|Q15652-3|JMJD1C;;nc|ENSG00000171988|Q15652-2|JMJD1C;;ENSG00000171988|ENST00000399262|JMJD1C 7.018473148345947 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9214 51.62 210.0 380080.0 25 0 35861.0 + 31025 RLFSSIVTV 9 72 511.3058557040536 1020.5971584749072 2 511.3056823611259 MULTI CID FTMS 0 0 0 9208 149606.875 0.1064231057704405 -5 0.2000160217285156 6 Unmodified _RLFSSIVTV_ ENSG00000167264|ENST00000565263|DUS2 49.55428908609986 0.0413471690215031 6 [{I|L}A][YR]S{I|L}VTV 9 3 + 63.376 0.0 0.0 6.2097 6.2097 94.05 0.0 0.0 0.0 2.383155737930309 46.47985238258393 2.383155737930309 63.3759123398972 0 1.174742501084005 1.5228787452803376 0.8494850021680094 0.0 [{I|L}A][YR]S{I|L}VTV 6.2097 - 148 1 1.499 64898.4 1.0 3551 5661 9208 SUDHL4_400M_050219_2,9214 SUDHL4_400M_050219_2,9214,RLFSSIVTV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9215 51.625 263.0 231710.0 25 0 38613.0 + 14977 ILQDGRIFI 9 83 537.8193489118913 1073.6241448905826 2 537.8194457888603 MULTI CID FTMS 0 0 0 9208 162831.75 1.0 0 0.0 7 Unmodified _ILQDGRIFI_ ENSG00000125835|ENST00000381342|SNRPB;ENSG00000128739|ENST00000390687|SNRPN;nc|ENSG00000125835|P14678-3|SNRPB;nc|ENSG00000125835|P14678|SNRPB;nc|ENSG00000128739|P63162-2|SNRPN 43.77239144664712 0.0547478964384323 6 {I|L}{I|L}QD 4 5 68.928 0.0 0.0 6.4201 0.0 0.0 0.0 601.3475300112805 601.3475300112805 51.70941280735775 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.4247425010840047 0.4247425010840047 + {I|L}{I|L}QD 6.4201 + + 133 + 1 1.499 54972.1 1.0 3552 5661 9208 SUDHL4_400M_050219_2,9215 SUDHL4_400M_050219_2,9215,ILQDGRIFI True True ILQDGRIFI 51.625351 537.81944578886 811384.9375 9208.0 nc|ENSG00000125835|P14678-3|SNRPB;;ENSG00000128739|ENST00000390687|SNRPN;;nc|ENSG00000125835|P14678|SNRPB;;ENSG00000125835|ENST00000381342|SNRPB;;nc|ENSG00000128739|P63162-2|SNRPN 3.612878163655599 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9216 51.639 800.0 86585.0 25 0 4054.8 -1 0 101 1029.492119170097 3085.454528110492 3 1030.497119128704 MULTI CID FTMS 0 0 0 9208 144945.421875 0.8935124485796087 -1 0.0823097229003906 8 6 ND[WH]VM[QP] 8 -1 22.128 0.0 0.0 0.71716 0.0 0.0 2059.970601493523 0.0 2059.970601493523 0.0 9.424712680444358 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 ND[WH]VM[QP] 0.71716 - 462 1 1.499 52213.6 0.4900000095367431 3553 5661 9208 SUDHL4_400M_050219_2,9216 SUDHL4_400M_050219_2,9216, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9218 51.657 800.0 63291.0 25 0 4695.9 -1 0 77 1004.8073651469256 3011.4002660409765 3 1005.475634753704 MULTI CID FTMS 0 0 0 9217 90204.0390625 0.6849417793522697 1 -0.0474357604980468 1 6 [NP]{I|L}{[{M(Oxidation (M))|F}D]|MM}WT{I|L} 8 -1 19.799 0.0 0.0 0.65746 0.0 0.0 0.0 2021.913546640839 2021.913546640839 10.84630327004689 0.0 0.0 0.0 0 0.0 0.0 1.1549471895720984 0.0 [NP]{I|L}{[{M(Oxidation (M))|F}D]|MM}WT{I|L} 0.65746 - 187 1 1.499 40246.5 0.4699999988079071 3554 5662 9217 SUDHL4_400M_050219_2,9218 SUDHL4_400M_050219_2,9218, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9219 51.671 800.0 113030.0 25 0 13399.0 -1 KEEMDEAGNK 10 124 583.7516457123163 1165.4887384914323 2 583.7521240115166 MULTI CID FTMS 0 0 0 9217 144212.875 0.2533827842472176 -5 0.2304344177246093 2 Oxidation (M) _KEEM(Oxidation (M))DEAGNK_ ENSG00000140750|ENST00000289968|ARHGAP17;nc|ENSG00000140750|Q68EM7-2|ARHGAP17;nc|ENSG00000140750|Q68EM7-4|ARHGAP17;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;nc|ENSG00000140750|Q68EM7-6|ARHGAP17 14.40537977576856 0.6058337302021266 6 QAD{I|L}A{I|L} 6 -1 49.531 0.0 0.0 4.2498 0.0 0.0 536.1364613263687 0.0 536.1364613263687 0.0 20.32251573369031 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.805462187404089 QAD{I|L}A{I|L} 4.2498 - 923 1 1.499 68934.8 0.5400000214576721 3555 5662 9217 SUDHL4_400M_050219_2,9219 SUDHL4_400M_050219_2,9219,KEEMDEAGNK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9220 51.678 402.0 178990.0 25 0 18301.0 + 25922 NLLPHAINL 9 112 502.797799175258 1003.581045417316 2 502.7979919314384 MULTI CID FTMS 0 0 0 9217 134096.625 0.800723117151435 -2 0.1343421936035156 3 Unmodified _NLLPHAINL_ ENSG00000141968|ENST00000602142|VAV1;nc|ENSG00000141968|P15498-2|VAV1 71.13359017698441 0.0206607516130725 6 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[EP]P{I|L} 7 4 54.67 0.0 0.0 5.4475 0.0 0.0 0.0 224.10549545077225 224.10549545077225 15.152930705212649 0.0 0.0 0.0 0 0.0 2.0 0.7742275032520141 1.0941876774005248 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[EP]P{I|L} 5.4475 - 589 1 1.499 62384.8 1.0 3556 5662 9217 SUDHL4_400M_050219_2,9220 SUDHL4_400M_050219_2,9220,NLLPHAINL True True NLLPHAINL 51.677957 502.797991931438 781558.3125 9217.0 ENSG00000141968|ENST00000602142|VAV1;;nc|ENSG00000141968|P15498-2|VAV1 5.41163953145345 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9221 51.687 492.0 110710.0 25 0 6500.5 + 40509 RLFNDPVAMV 10 80 581.3070896397096 1160.599626346219 2 581.3077270388603 MULTI CID FTMS 0 0 0 9217 85195.421875 1.0 0 0.0 4 Unmodified _VITSQEREVT_ ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3;ENSG00000214160|ENST00000397676|ALG3 9.38312468134398 0.6832340498775793 6 PVAMV 5 9 24.606 0.0 0.0 2.1201 0.0 0.0 645.3224658714319 0.0 645.3224658714319 0.0 8.407944756032066 0.0 0.0 0 0.5397644799392252 0.0 0.0 0.0 PVAMV 2.1201 - 96 1 1.499 49486.8 1.0 3557 5662 9217 SUDHL4_400M_050219_2,9221 SUDHL4_400M_050219_2,9221,VITSQEREVT False False RLFNDPVAMV 51.686657 581.30772703886 668008.0 9217.0 ENST00000461415.5_1_3:183962900-183966669:-|nuORF;;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;;nc|ENSG00000214160|Q92685-2|ALG3;;ENSG00000214160|ENST00000397676|ALG3 4.902235507965088 2.0 False 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9223 51.703 800.0 41842.0 25 0 6167.3 -1 0 40 1192.5605744481736 3574.6598939447213 3 1193.562915027142 MULTI CID FTMS 0 0 0 9222 27945.69140625 0.3370135334019034 1 -0.044097900390625 1 6 P 1 -1 5.4846 0.0 0.0 0.15343 0.0 0.0 2554.063898926946 920.5048311822874 3474.568730109233 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.15343 - 2 + 1 1.499 29867.4 0.3499999940395355 3558 5663 9222 SUDHL4_400M_050219_2,9223 SUDHL4_400M_050219_2,9223, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9224 51.717 800.0 93412.0 25 0 6788.4 + -1 RLFNDPVAMV 10 91 589.3054967594917 1176.5964405857833 2 589.3066284060478 MULTI CID FTMS 0 0 0 9222 96566.0 1.0 0 0.0 2 Oxidation (M) _RLFNDPVAM(Oxidation (M))V_ ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3;ENSG00000214160|ENST00000397676|ALG3 20.41453444215458 0.5050059513928961 6 [YT]A[RP]GPVA{M(Oxidation (M))|F}V 11 -1 + 46.356 0.0 0.0 3.9398 3.9398 77.21 0.0 0.0 0.0 4.924843744914611 4.924843744914611 4.924843744914611 4.924843744914611 0 0.0356668758921828 0.0 0.5994850021680094 0.7742275032520141 [YT]A[RP]GPVA{M(Oxidation (M))|F}V;[YT]AVPG[RP]A{M(Oxidation (M))|F}V;[TA]Y[RP]GPVA{M(Oxidation (M))|F}V;[YT]AVPG[RP][PG]Y;[VP]A[R{M(Oxidation (M))|F}][TA]VA{M(Oxidation (M))|F}V;[YE]A[KP][RP]Y[PG];{[TV]|[{I|L}S]}A[W{I|L}][RD]A{M(Oxidation (M))|F}V;[YT]A[RP][RP]A{M(Oxidation (M))|F}V;[YE]KK[RH]Y[PG];[YE]A[KP][RP]A{M(Oxidation (M))|F}V 3.9398;3.5213;3.4135;3.0139;1.6987;1.5905;1.4697;1.3851;1.3735;1.1551 -;-;-;-;-;-;-;-;-;- 237 1 1.499 60483.3 0.4399999976158142 3559 5663 9222 SUDHL4_400M_050219_2,9224 SUDHL4_400M_050219_2,9224,RLFNDPVAMV False False RLFNDPVAMV 51.716895 589.306628406048 527061.5 9222.0 ENST00000461415.5_1_3:183962900-183966669:-|nuORF;;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;;nc|ENSG00000214160|Q92685-2|ALG3;;ENSG00000214160|ENST00000397676|ALG3 7.224135557810466 2.0 True 10.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9225 51.731 800.0 140160.0 25 0 9278.6 + 11720 GLIDDYSMV 9 106 1028.4561363900536 1027.4488599234537 1 1029.459643542767 MULTI CID FTMS 0 0 0 9222 91863.75 0.8955960525578187 -2 0.0994682312011718 3 Oxidation (M) _GLIDDYSM(Oxidation (M))V_ ENSG00000111231|ENST00000228827|GPN3;nc|ENSG00000111231|Q9UHW5-2|GPN3;nc|ENSG00000111231|Q9UHW5-3|GPN3 46.020951573049366 0.0490941689151868 6 VT{I|L}HYS[{M(Oxidation (M))|F}V] 8 4 43.899 0.0 0.0 4.2726 0.0 0.0 62.99006576146582 0.0 62.99006576146582 0.0 17.787574021113443 0.0 0.0 0 1.0629529932484498 0.0 1.416386562212267 0.0 VT{I|L}HYS[{M(Oxidation (M))|F}V] 4.2726 - 2225 + 1 1.499 77712.6 0.4000000059604645 3560 5663 9222 SUDHL4_400M_050219_2,9225 SUDHL4_400M_050219_2,9225,GLIDDYSMV True False GLIDDYSMV 51.730759 1029.45964354277 1020481.6875 9222.0 nc|ENSG00000111231|Q9UHW5-3|GPN3;;nc|ENSG00000111231|Q9UHW5-2|GPN3;;ENSG00000111231|ENST00000228827|GPN3 6.864625136057536 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9228 51.741 193.0 409690.0 25 0 60687.0 + + 18633 ALFPERITV 9 82 523.3055338552764 1044.5965147773527 2 523.3058349490166 MULTI CID FTMS 0 0 0 9227 232442.9375 0.7888522658927795 -1 0.0040702819824218 1 Unmodified _LAFPVSIWL_ nc|ENSG00000137343|Q5SQI0-5|ATAT1;nc|ENSG00000137343|Q5SQI0|ATAT1;nc|ENSG00000137343|Q5SQI0-7|ATAT1;nc|ENSG00000137343|Q5SQI0-4|ATAT1;nc|ENSG00000137343|Q5SQI0-3|ATAT1;nc|ENSG00000137343|Q5SQI0-6|ATAT1 23.1484247019978 0.2366544122328345 6 [{I|L}A]{M(Oxidation (M))|F}PE[R{I|L}]S{I|L} 9 -1 + 46.794 0.0 0.0 4.4796 4.4796 74.277 0.0 0.0 0.0 15.366837651091387 1.249387366082999 1.249387366082999 1.249387366082999 0 0.7742275032520141 1.6989700043360187 0.0 0.0 [{I|L}A]{M(Oxidation (M))|F}PE[R{I|L}]S{I|L};[{I|L}A]{M(Oxidation (M))|F}PE[R{I|L}]TV 4.4796;4.36 -;- 112 + 1 1.499 64026.2 1.0 3561 5665 9227 SUDHL4_400M_050219_2,9228 SUDHL4_400M_050219_2,9228,LAFPVSIWL False False ALFPERITV 51.74109 523.305834949017 1435581.75 9227.0 nc|ENSG00000137343|Q5SQI0-5|ATAT1;;nc|ENSG00000137343|Q5SQI0|ATAT1;;nc|ENSG00000137343|Q5SQI0-7|ATAT1;;nc|ENSG00000137343|Q5SQI0-4|ATAT1;;nc|ENSG00000137343|Q5SQI0-3|ATAT1;;nc|ENSG00000137343|Q5SQI0-6|ATAT1 6.04628054300944 2.0 False 9.0 True nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 9229 51.745 219.0 208780.0 25 0 13256.0 + 16869 KIFDEILVNA 10 85 581.3291447180866 1160.643736502973 2 581.3296386599541 MULTI CID FTMS 0 0 0 9227 182014.1875 0.2583259265567093 -3 0.0956039428710937 2 Unmodified _KIFDEILVNA_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant 29.84058131909904 0.2982332456971691 6 {M(Oxidation (M))|F}K{I|L}{I|L}V{[QG]|[NA]} 7 4 42.963 0.0 0.0 3.7017 0.0 0.0 357.1545277326188 0.0 357.1545277326188 0.0 26.76554474077804 0.0 0.0 0 1.0 0.0 0.0 0.4247425010840047 {M(Oxidation (M))|F}K{I|L}{I|L}V{[QG]|[NA]} 3.7017 - 161 1 1.499 42014.1 1.0 3562 5665 9227 SUDHL4_400M_050219_2,9229 SUDHL4_400M_050219_2,9229,KIFDEILVNA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9230 51.759 800.0 125550.0 25 0 27252.0 + 30746 RGTMLIKLYI 10 84 604.3665222221024 1206.718491511005 2 604.3677856326103 MULTI CID FTMS 0 0 0 9227 169173.25 0.4669298449971118 -5 0.2299461364746093 3 Unmodified _RGTMLIKLYI_ REV__ENST00000589761.1_1_17:58378837-58469252:-|nuORF 0.6268255596534771 0.7237370565709429 6 CH 2 -1 4.9485 0.0 0.0 0.41008 0.0 0.0 684.4681385830735 279.1452435528232 963.6133821358968 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 CH 0.41008 - 10 + 1 1.499 77462.8 0.5899999737739563 3563 5665 9227 SUDHL4_400M_050219_2,9230 SUDHL4_400M_050219_2,9230,RGTMLIKLYI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9231 51.773 783.0 142340.0 25 0 11979.0 + 30879 RIPAYFVTV 9 114 533.308699881101 1064.602846829002 2 533.3085204958916 MULTI CID FTMS 0 0 0 9227 100110.65625 0.6270308390117212 -3 0.0956039428710937 4 Unmodified _RIPAYFVTV_ ENSG00000204394|ENST00000375663|VARS1;ENST00000461874.1_1_6:31749609-31749932:-|nuORF;ENST00000483275.1_1_6:31749724-31750195:-|nuORF 58.6788170122104 0.0268135626297836 6 {[TV]|[{I|L}S]}M[R{I|L}]{M(Oxidation (M))|F}VTV 9 4 + 67.418 0.0 0.0 6.3327 6.3327 81.908 0.0 0.0 0.0 2.0732594320775632 16.478174818886373 2.0732594320775632 2.0732594320775632 0 1.2302046884880935 1.5228787452803376 0.6549471895720985 0.3494850021680094 {[TV]|[{I|L}S]}M[R{I|L}]{M(Oxidation (M))|F}VTV;[{M(Oxidation (M))|F}V]T[RP]{M(Oxidation (M))|F}VTV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[RP]{M(Oxidation (M))|F}VTV;[R{I|L}][PA]Y{M(Oxidation (M))|F}VTV;[{M(Oxidation (M))|F}V][R{I|L}][MT]VTV;[{I|L}A][RP]Y{M(Oxidation (M))|F}VTV;[{I|L}A]{M(Oxidation (M))|F}[R{I|L}]{M(Oxidation (M))|F}VTV;[{M(Oxidation (M))|F}V][R{I|L}]G{M(Oxidation (M))|F}VEV;[{I|L}A]Y[RP]{M(Oxidation (M))|F}VTV;[{M(Oxidation (M))|F}V]T[KG][WK]TV 6.3327;6.138;6.0499;5.4678;5.0596;4.687;4.4043;4.3473;4.1215;3.9963 -;-;-;+;-;-;-;-;-;- + 1021 1 1.499 95009.0 1.0 3564 5665 9227 SUDHL4_400M_050219_2,9231 SUDHL4_400M_050219_2,9231,RIPAYFVTV True True RIPAYFVTV 51.772617 533.308520495892 919906.5 9227.0 ENSG00000204394|ENST00000375663|VARS1;;ENST00000461874.1_1_6:31749609-31749932:-|nuORF;;ENST00000483275.1_1_6:31749724-31750195:-|nuORF 6.789998213450114 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9233 51.777 88.0 447220.0 25 0 107280.0 + 20693 LLRPGVLLA 9 56 476.3211677308881 950.6277825285762 2 476.3211852908134 MULTI CID FTMS 0 0 0 9232 534053.75 0.0627232381946545 7 -0.2045097351074218 1 Unmodified _LLRPGVLLA_ REV__ENSG00000119227|ENST00000412723|PIGZ 28.486842064014134 0.1687311288560894 6 {I|L}{I|L}G 3 -1 48.5 0.0 0.0 5.1019 0.0 0.0 0.0 664.4160860650999 664.4160860650999 27.798859261803983 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L}G 5.1019 - 21 + 1 1.499 35328.5 1.0 3565 5666 9232 SUDHL4_400M_050219_2,9233 SUDHL4_400M_050219_2,9233,LLRPGVLLA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9234 51.786 463.0 158120.0 25 0 15161.0 + 43204 RAAEPLLTL 9 100 492.2976515433188 982.5807501534376 2 492.2976867556572 MULTI CID FTMS 0 0 0 9232 76287.5859375 0.876552769453183 1 -0.03277587890625 2 Unmodified _WAAVLPLTL_ nc|ENSG00000165525|O60524-5|NEMF;ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-3|NEMF;nc|ENSG00000165525|O60524-4|NEMF 19.438996006549623 0.310492472477042 6 [{I|L}A]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}{I|L}T{I|L} 9 5 + 37.311 0.0 0.0 3.7972 3.7972 84.751 0.0 0.0 0.0 12.42029978953341 19.150378042405908 12.42029978953341 22.498774732166005 0 0.718765315847925 1.6989700043360187 0.0 0.0 [{I|L}A]{[QD]|[EN]|[WG]|[KD]|[RS]}P{I|L}{I|L}T{I|L};{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[HK]{I|L}{I|L}T{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}{I|L}[HD]{I|L} 3.7972;1.5075;0.67735 -;-;- 194 1 1.499 60812.1 1.0 3566 5666 9232 SUDHL4_400M_050219_2,9234 SUDHL4_400M_050219_2,9234,WAAVLPLTL False False RAAEPLLTL 51.785606 492.297686755657 789324.625 9232.0 nc|ENSG00000165525|O60524-5|NEMF;;ENSG00000165525|ENST00000298310|NEMF;;nc|ENSG00000165525|O60524-3|NEMF;;nc|ENSG00000165525|O60524-4|NEMF -0.1786954005559285 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9235 51.792 330.0 112280.0 25 0 13448.0 18102 KTKYRKRLD 9 65 403.2467073765457 1206.7182927298372 3 403.2463561892509 MULTI CID FTMS 0 0 0 9232 116551.2109375 0.5309604103625323 -3 0.0859718322753906 3 Unmodified _KTKYRKRLD_ ENSG00000236287|ENST00000413761|ZBED5 2.498486711656943 0.8274632594916526 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.499 33000.0 1.0 3567 5666 9232 SUDHL4_400M_050219_2,9235 SUDHL4_400M_050219_2,9235,KTKYRKRLD False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9236 51.805 800.0 90541.0 25 0 14801.0 + 19056 LDPTVRVVL 9 95 506.3129634958868 1010.6113740585736 2 506.3138000369072 MULTI CID FTMS 0 0 0 9232 86202.609375 1.0 0 0.0 4 Unmodified _LDPTVRVVL_ REV__ENSG00000153885|ENST00000683859|KCTD15;REV__nc|ENSG00000153885|Q96SI1-2|KCTD15 18.1463463914782 0.3454829746528889 6 VVV{I|L} 4 -1 32.167 0.0 0.0 3.1829 0.0 0.0 582.3110768317305 0.0 582.3110768317305 0.0 17.562893943202624 0.0 0.0 0 0.5 0.0 0.0 0.0 VVV{I|L} 3.1829 - 145 1 1.499 60466.4 0.9100000262260436 3568 5666 9232 SUDHL4_400M_050219_2,9236 SUDHL4_400M_050219_2,9236,LDPTVRVVL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9238 51.819 648.0 151400.0 25 0 11965.0 + 34404 SLVENIERL 9 130 536.801237747474 1071.587922561748 2 536.8005859255791 MULTI CID FTMS 0 0 0 9237 85647.9921875 0.6896665545839977 1 -0.044921875 1 Unmodified _SLVENIERL_ ENSG00000234127|ENST00000454678|TRIM26 41.95555342248728 0.0647214845423414 6 {[TV]|[{I|L}S]}VEN{I|L}ER{I|L} 9 0 + 68.955 0.0 0.0 6.4349 6.4349 89.581 0.0 0.0 0.0 27.147642715192504 10.688812894078126 10.688812894078126 9.208187539523747 0 0.805462187404089 2.0 0.3494850021680094 0.2614393726401688 + + {[TV]|[{I|L}S]}VEN{I|L}ER{I|L};{[TV]|[{I|L}S]}VEGG{I|L}ER{I|L};{[TV]|[{I|L}S]}VEN{I|L}[W{I|L}]V;{[TV]|[{I|L}S]}VEGG{I|L}[W{I|L}]V;{[TV]|[{I|L}S]}V[HA][YN]R{I|L};{[TV]|[{I|L}S]}V[H{I|L}]{[QN]|[E{I|L}]|[KN]}YV;{[TV]|[{I|L}S]}V[HQ]{I|L}N[YV];{[TV]|[{I|L}S]}[HN]{I|L}{I|L}N[YV];{[TV]|[{I|L}S]}{[HG]|PP}{I|L}[YN]R{I|L};{[TV]|[{I|L}S]}V[HQ]{I|L}GG[YV] 6.4349;5.5756;5.4374;4.3341;4.1781;3.8161;3.7761;3.4738;3.1336;2.9168 +;-;-;-;-;-;-;-;-;- + 536 + 1 1.499 82949.5 1.0 3569 5667 9237 SUDHL4_400M_050219_2,9238 SUDHL4_400M_050219_2,9238,SLVENIERL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9239 51.827 426.0 96184.0 25 0 5482.9 -1 0 61 881.4141671991518 0 881.4118530154228 PEAK CID FTMS 0 0 0 9237 142192.078125 0.0083059409785621 41 -1.2104568481445312 2 6 EY{M(Oxidation (M))|F}ANQQAED 10 -1 63.933 0.0 0.0 3.6309 0.0 0.0 229.1875130098286 333.1316012018188 562.3191142116474 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.805462187404089 EY{M(Oxidation (M))|F}ANQQAED 3.6309 - 621 + 1 1.499 35144.5 1.0 3570 5667 9237 SUDHL4_400M_050219_2,9239 SUDHL4_400M_050219_2,9239, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9240 51.837 550.0 191320.0 25 0 14699.0 + + 43076 YVFPGVTRL 9 113 526.3004460652469 1050.5863391972937 2 526.3009521365166 MULTI CID FTMS 0 0 0 9237 96848.6875 0.1558773738652187 -8 0.3485107421875 3 Unmodified _VYLFILHF_ nc|ENSG00000160284|Q9H0A9-2|SPATC1L;ENSG00000160284|ENST00000291672|SPATC1L 17.086550045450526 0.6584923310065985 6 [YV]{M(Oxidation (M))|F}PR 5 -1 47.703 0.0 0.0 4.5406 0.0 0.0 0.0 385.2195833795532 385.2195833795532 21.760912590556813 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.4247425010840047 [YV]{M(Oxidation (M))|F}PR 4.5406 - 331 + 1 1.499 85359.3 1.0 3571 5667 9237 SUDHL4_400M_050219_2,9240 SUDHL4_400M_050219_2,9240,VYLFILHF False False YVFPGVTRL 51.836515 526.300952136517 8499050.0 9237.0 nc|ENSG00000160284|Q9H0A9-2|SPATC1L;;ENSG00000160284|ENST00000291672|SPATC1L 4.676793575286865 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9241 51.85 800.0 119710.0 25 0 15618.0 + 34005 SLISGIIRA 9 111 465.29262223164153 928.5706915300832 2 465.2929260134697 MULTI CID FTMS 0 0 0 9237 91681.1328125 0.7150643121201947 -2 0.0705795288085937 4 Unmodified _SLISGIIRA_ ENSG00000119392|ENST00000309971|GLE1;nc|ENSG00000119392|Q53GS7-2|GLE1 24.99096001346401 0.2132109383330889 6 {[TV]|[{I|L}S]}{I|L}SG{I|L}RA{I|L} 9 2 + 52.88 0.0 0.0 5.6947 5.6947 89.749 0.0 0.0 0.0 35.8553509663766 3.92223515230026 3.92223515230026 14.3753063169585 0 0.9916440611282626 2.0 0.0 0.0 {[TV]|[{I|L}S]}{I|L}SG{I|L}RA{I|L};{[TV]|[{I|L}S]}{I|L}A[VS]RA{I|L} 5.6947;4.1466 -;- 160 + 1 1.499 77551.6 0.3899999856948852 3572 5667 9237 SUDHL4_400M_050219_2,9241 SUDHL4_400M_050219_2,9241,SLISGIIRA False True SLISGIIRA 51.850331 465.29292601347 574613.4375 9237.0 ENSG00000119392|ENST00000309971|GLE1;;nc|ENSG00000119392|Q53GS7-2|GLE1 4.264724651972453 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9243 51.861 399.0 112640.0 25 0 20190.0 + 34065 SLLEKSLGL 9 69 480.29215052907534 958.5697481249508 2 480.2923461794853 MULTI CID FTMS 0 0 0 9242 89094.265625 0.0367333670833416 8 -0.1958465576171875 1 Unmodified _SLLEKSLGL_ ENSG00000124802|ENST00000379715|EEF1E1;nc|ENSG00000124802|O43324-2|EEF1E1 34.40172386719151 0.1061884637610825 6 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 7 3 47.153 0.0 0.0 4.9191 0.0 0.0 0.0 328.18532364668823 328.18532364668823 35.16334779402399 0.0 0.0 0.0 0 0.8935078169319297 2.0 0.6747425010840047 0.0 {[TV]|[{I|L}S]}{I|L}GS{I|L}G 4.9191 - 176 1 1.499 42133.3 1.0 3573 5668 9242 SUDHL4_400M_050219_2,9243 SUDHL4_400M_050219_2,9243,SLLEKSLGL True True SLLEKSLGL 51.861327 480.292346179485 39570168.0 9242.0 ENSG00000124802|ENST00000379715|EEF1E1;;nc|ENSG00000124802|O43324-2|EEF1E1 2.6515536308288574 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9244 51.866 274.0 207310.0 25 0 16848.0 + 9733 FLYSDEVQI 9 88 557.2767081140414 1112.5388632948827 2 557.2765991091728 MULTI CID FTMS 0 0 0 9242 217577.671875 0.358807406727917 -6 0.2111053466796875 2 Unmodified _FLYSDEVQI_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;nc|ENSG00000064726|Q9H0C5-2|BTBD1 46.92087301778293 0.0471210510596396 6 {[{M(Oxidation (M))|F}C]|[YS]}DE{I|L}{M(Oxidation (M))|F}VQ{I|L} 9 4 {[{M(Oxidation (M))|F}C]|[YS]}DE{I|L}{M(Oxidation (M))|F}V + + 18.271 22.246 2.6068 1.6423 1.6423 50.09 0.0 0.0 0.0 0.0 -8.736965052398475 -8.736965052398475 0.0 0 0.0 0.0 0.0 0.3807196863200844 {[{M(Oxidation (M))|F}C]|[YS]}DE{I|L}{M(Oxidation (M))|F}VQ{I|L} 1.6423 - 179 + 1 1.499 48998.2 1.0 3574 5668 9242 SUDHL4_400M_050219_2,9244 SUDHL4_400M_050219_2,9244,FLYSDEVQI True True FLYSDEVQI 51.866417 557.276599109173 6100459.5 9242.0 ENSG00000133243|ENST00000255608|BTBD2;;nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1 5.109568595886231 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9245 51.876 554.0 180430.0 25 0 38990.0 + 33734 SLADLYFRA 9 89 528.2797456325188 1054.5449383318376 2 528.2796508669853 MULTI CID FTMS 0 0 0 9242 124856.1953125 0.4490804490986297 -6 0.2111053466796875 3 Unmodified _SLADLYFRA_ ENSG00000196510|ENST00000455511|ANAPC7;nc|ENSG00000196510|Q9UJX3-2|ANAPC7 42.312485326615175 0.0627620958981271 6 {[TV]|[{I|L}S]}AD{I|L}Y{M(Oxidation (M))|F} 7 2 69.469 0.0 0.0 6.5875 0.0 0.0 0.0 242.12635217838127 242.12635217838127 58.87265026338584 0.0 0.0 0.0 0 1.3494850021680094 2.0 0.4247425010840047 0.0 + {[TV]|[{I|L}S]}AD{I|L}Y{M(Oxidation (M))|F} 6.5875 + + 296 + 1 1.499 80416.4 1.0 3575 5668 9242 SUDHL4_400M_050219_2,9245 SUDHL4_400M_050219_2,9245,SLADLYFRA True True SLADLYFRA 51.876141 528.279650866985 1556147.5 9242.0 nc|ENSG00000196510|Q9UJX3-2|ANAPC7;;ENSG00000196510|ENST00000455511|ANAPC7 7.393161455790202 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9246 51.888 702.0 83843.0 25 0 29688.0 -1 KAQRRQMLILP 11 72 685.4107731307937 1368.8069933283873 2 685.4109985232353 MULTI CID FTMS 0 0 0 9242 97476.5859375 0.8174452617439182 -1 0.044921875 4 Oxidation (M) _KAQRRQM(Oxidation (M))LILP_ nc|ENSG00000139266|Q86YJ5-2|MARCHF9 1.4819007175156935 0.86815623132643 6 K 1 -1 1.9897 0.0 0.0 0.14536 0.0 0.0 1140.6589963574872 97.03006921939686 1237.689065576884 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.14536 + + 18 + 1 1.499 55699.2 1.0 3576 5668 9242 SUDHL4_400M_050219_2,9246 SUDHL4_400M_050219_2,9246,KAQRRQMLILP False False False False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 9247 51.894 280.0 432190.0 25 0 62378.0 + 31500 RQFDLAWQY 9 78 613.8008556345497 1225.5871583358994 2 613.8009521365166 MULTI CID FTMS 0 0 0 9242 92589.125 0.454001302771477 -5 0.1636695861816406 5 Unmodified _RQFDLAWQY_ ENSG00000175482|ENST00000312419|POLD4;ENST00000524743.1_1_11:67119998-67120510:-|nuORF;ENST00000528087.1_1_11:67120378-67120948:-|nuORF;nc|ENSG00000175482|Q9HCU8-2|POLD4 19.361941925380144 0.3125782356748823 6 QHAWQY 6 4 43.691 0.0 0.0 3.5649 0.0 0.0 394.20164687324376 0.0 394.20164687324376 0.0 30.97077769377812 0.0 0.0 0 0.7059771852360797 0.0 0.0 0.0 QHAWQY 3.5649 - 378 1 1.499 94665.3 1.0 3577 5668 9242 SUDHL4_400M_050219_2,9247 SUDHL4_400M_050219_2,9247,RQFDLAWQY False True RQFDLAWQY 51.89352 613.800952136517 1178600.75 9242.0 ENST00000528087.1_1_11:67120378-67120948:-|nuORF;;ENSG00000175482|ENST00000312419|POLD4;;ENST00000524743.1_1_11:67119998-67120510:-|nuORF;;nc|ENSG00000175482|Q9HCU8-2|POLD4 6.317824204762776 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9249 51.898 82.0 477370.0 25 0 42925.0 + 31026 RLFSSIVTV 9 55 511.3058557040536 1020.5971584749072 2 511.3056518435478 MULTI CID FTMS 0 0 0 9248 556860.125 0.3961233999588305 3 -0.0534439086914062 1 Unmodified _RLFSSIVTV_ ENSG00000167264|ENST00000565263|DUS2 18.1463463914782 0.3454829746528889 6 {[TV]|[{I|L}S]}V[YQ]{I|L}V 7 6 36.203 0.0 0.0 3.5472 0.0 0.0 0.0 215.1023740145221 215.1023740145221 5.744944827498415 0.0 0.0 0.0 0 0.5 1.3979400086720375 0.4247425010840047 0.0 {[TV]|[{I|L}S]}V[YQ]{I|L}V 3.5472 - 33 1 1.499 37093.5 1.0 3578 5669 9248 SUDHL4_400M_050219_2,9249 SUDHL4_400M_050219_2,9249,RLFSSIVTV False True RLFSSIVTV 51.898308 511.305651843548 15757120.0 9248.0 ENSG00000167264|ENST00000565263|DUS2 5.096830685933431 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9250 51.901 126.0 337460.0 25 0 50182.0 + 37891 TLWGIQKEL 9 71 544.3117510333221 1086.6089491334442 2 544.3112060427666 MULTI CID FTMS 0 0 0 9248 268760.90625 0.1565842460064444 4 -0.0836181640625 2 Unmodified _TLWGIQKEL_ ENSG00000134333|ENST00000422447|LDHA;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;ENST00000538451.1_1_11:18424358-18428825:+|nuORF;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA 26.268140514670165 0.1969607489560049 6 [{I|L}T]W 3 6 34.705 0.0 0.0 3.1939 0.0 0.0 0.0 683.3757418268186 683.3757418268186 21.606056125004827 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [{I|L}T]W 3.1939 + + 189 + 1 1.499 40871.0 1.0 3579 5669 9248 SUDHL4_400M_050219_2,9250 SUDHL4_400M_050219_2,9250,TLWGIQKEL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9251 51.91 546.0 114940.0 25 0 9223.4 + 34113 SLLPQLTGA 9 98 450.263427638848 898.5123023444961 2 450.2628661990166 MULTI CID FTMS 0 0 0 9248 117802.1328125 0.321524546849311 -9 0.388641357421875 3 Unmodified _SLLPQLTGA_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 32.30548876998284 0.1201446275138228 6 [QP]{I|L}TV 5 5 30.415 0.0 0.0 3.3851 0.0 0.0 0.0 357.1778656592024 357.1778656592024 5.353454143368772 0.0 0.0 0.0 0 0.3054621874040891 0.8860566476931632 0.3807196863200844 0.0 [QP]{I|L}TV 3.3851 - 148 1 1.499 57363.6 1.0 3580 5669 9248 SUDHL4_400M_050219_2,9251 SUDHL4_400M_050219_2,9251,SLLPQLTGA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9253 51.918 265.0 133730.0 25 0 16621.0 + -1 AVRPCCCCAAL 11 68 583.7516457123163 1165.4887384914323 2 583.7521240115166 MULTI CID FTMS 0 0 0 9252 281519.875 0.4946319095880218 3 -0.0666580200195312 1 Carbamidomethyl (C) _AVRPC(Carbamidomethyl (C))CCCAAL_ REV__ENSG00000076706|ENST00000264036|MCAM;REV__ENST00000525555.5_1_11:119186850-119187838:-|nuORF;REV__ENST00000528533.5_1_11:119181936-119187838:-|nuORF;REV__ENST00000530937.5_1_11:119185957-119187838:-|nuORF 10.073929032068715 0.8255972128077141 6 A{I|L} 2 -1 22.959 0.0 0.0 1.9699 0.0 0.0 963.3566259199466 0.0 963.3566259199466 0.0 0.9960752895140956 0.0 0.0 0 0.5 0.0 0.0 0.0 A{I|L} 1.9699 + + 33 + 1 1.499 31035.5 1.0 3581 5670 9252 SUDHL4_400M_050219_2,9253 SUDHL4_400M_050219_2,9253,AVRPCCCCAAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9254 51.932 800.0 62029.0 25 0 9993.4 22824 LRNARKLPEK 10 72 408.9223904892236 1223.7453420678708 3 408.9222595095634 MULTI CID FTMS 0 0 0 9252 87861.109375 0.8207756505208312 2 -0.0364837646484375 2 Unmodified _LRNARKLPEK_ ENSG00000138614|ENST00000313182|INTS14;nc|ENSG00000138614|Q96SY0-3|INTS14;nc|ENSG00000138614|Q96SY0-4|INTS14 0.6268255596534771 0.7237370565709429 6 N 1 9 5.4846 0.0 0.0 0.44818 0.0 0.0 701.4788758586895 405.1899813287719 1106.6688571874615 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + N 0.44818 + + 4 + 1 1.499 43765.8 0.949999988079071 3582 5670 9252 SUDHL4_400M_050219_2,9254 SUDHL4_400M_050219_2,9254,LRNARKLPEK False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9255 51.943 639.0 135190.0 25 0 11076.0 + 39684 VEEPLPSTL 9 117 492.7658624516646 983.5171719701292 2 492.7658569216728 MULTI CID FTMS 0 0 0 9252 86929.9921875 0.6168110950440092 -12 0.4976348876953125 3 Unmodified _VEEPLPSTL_ REV__ENSG00000213719|ENST00000375784|CLIC1 15.847184025352805 0.4077185912009129 6 {NN|[MP]|[D{I|L}]|[EV]}EPVE 6 -1 27.33 0.0 0.0 2.7788 0.0 0.0 0.0 298.1798666324917 298.1798666324917 11.757211214983124 0.0 0.0 0.0 0 0.0 0.6989700043360187 0.1923877696554315 0.0 {NN|[MP]|[D{I|L}]|[EV]}EPVE 2.7788 - 197 1 1.499 71825.7 1.0 3583 5670 9252 SUDHL4_400M_050219_2,9255 SUDHL4_400M_050219_2,9255,VEEPLPSTL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9258 51.963 800.0 113960.0 25 0 12214.0 + 42454 VTGFDEIK 8 109 454.741736210041 907.468919486882 2 454.7417175173759 MULTI CID FTMS 0 0 0 9257 71011.3828125 0.5551678310312648 1 -0.0301742553710937 1 Unmodified _VTGFDEIK_ REV__ENSG00000100532|ENST00000216420|CGRRF1;REV__ENST00000556216.5_1_14:54997446-55005098:+|nuORF;REV__ENST00000557184.1_1_14:54976944-54997777:+|nuORF 8.593279151180031 0.7721714526254883 6 A{I|L} 2 -1 30.969 0.0 0.0 3.4127 0.0 0.0 0.0 720.3252422483125 720.3252422483125 17.870156338638594 0.0 0.0 0.0 0 0.0 1.0 0.0 0.0 A{I|L} 3.4127 - 138 + 1 1.499 75262.4 0.4300000071525574 3584 5672 9257 SUDHL4_400M_050219_2,9258 SUDHL4_400M_050219_2,9258,VTGFDEIK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9259 51.977 800.0 87028.0 25 0 11867.0 31472 RPVSWRFLVLP 11 102 457.27620865388826 1368.8067965618648 3 457.2764160037041 MULTI CID FTMS 0 0 0 9257 99938.6484375 0.8775750859351 4 -0.0992088317871093 2 Unmodified _RPVSWRFLVLP_ ENST00000483825.5_1_1:167400597-167400867:-|nuORF 1.214830529360525 0.8694162858786273 6 {I|L} 1 10 10.278 0.0 0.0 0.75084 0.0 0.0 1237.7121595763165 0.0 1237.7121595763165 0.0 0.0965257759769322 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.75084 + + 24 + 1 1.499 61647.3 0.3700000047683716 3585 5672 9257 SUDHL4_400M_050219_2,9259 SUDHL4_400M_050219_2,9259,RPVSWRFLVLP False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9262 51.998 800.0 157520.0 25 0 13468.0 + 14845 ILGIQPPSV 9 131 462.28216359613606 922.549774259072 2 462.2821533083916 MULTI CID FTMS 0 0 0 9261 119718.234375 0.6112460666122271 -4 0.0707283020019531 1 Unmodified _ILGIQPPSV_ ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8 63.562846038646086 0.0241094678104353 6 {I|L}{I|L}GD 4 6 38.672 0.0 0.0 4.1919 0.0 0.0 0.0 521.3100876119331 521.3100876119331 15.3520366087006 0.0 0.0 0.0 0 0.5 2.0 0.3494850021680094 0.0 {I|L}{I|L}GD 4.1919 - 306 1 1.499 97765.2 0.8399999737739563 3586 5674 9261 SUDHL4_400M_050219_2,9262 SUDHL4_400M_050219_2,9262,ILGIQPPSV True True ILGIQPPSV 51.997564 462.282153308392 2780240.25 9261.0 nc|ENSG00000213079|Q9UPN6-2|SCAF8;;ENSG00000213079|ENST00000367178|SCAF8 5.387005805969238 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9263 52.011 800.0 126940.0 25 0 14474.0 4691 DCANKVTG 8 118 404.1880776571826 806.3616023811652 2 404.1874572634697 MULTI CID FTMS 0 0 0 9261 125965.921875 0.6445406453482181 -4 0.0707283020019531 2 Unmodified _DCANKVTG_ ENSG00000063322|ENST00000315588|MED29 7.910154910731844 0.7763180056447161 6 D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L} 6 7 + 36.229 0.0 0.0 4.4929 4.4929 87.497 0.0 0.0 0.0 15.981913846420746 8.169567004899996 8.169567004899996 32.99803764475704 0 0.0 0.0 0.4247425010840047 0.0 D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};[Y{M(Oxidation (M))|F}][YV]C{I|L};{[YC]|[HE]}[KQ]{[YC]|[HE]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[YV][YE] 4.4929;0.40072;0.36726;0.11899 -;-;-;- 111 + 1 1.499 81682.9 0.9399999976158142 3587 5674 9261 SUDHL4_400M_050219_2,9263 SUDHL4_400M_050219_2,9263,DCANKVTG False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9265 52.017 146.0 213200.0 25 0 15548.0 + 16870 KIFDEILVNA 10 62 581.3291447180866 1160.643736502973 2 581.3293334841728 MULTI CID FTMS 0 0 0 9264 216732.21875 0.3075999293916863 7 -0.2040061950683593 1 Unmodified _KIFDEILVNA_ ENSG00000077097|ENST00000264331|TOP2B;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;nc|ENSG00000131747|P11388-2|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-4|TOP2A;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant 21.59015148037692 0.4836074274810599 6 {I|L}K{I|L}{I|L}V{[QG]|[NA]} 7 4 40.974 0.0 0.0 3.5303 0.0 0.0 391.1385060041032 0.0 391.1385060041032 0.0 28.11500693736938 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.0 {I|L}K{I|L}{I|L}V{[QG]|[NA]} 3.5303 - 86 1 1.499 31416.2 1.0 3588 5675 9264 SUDHL4_400M_050219_2,9265 SUDHL4_400M_050219_2,9265,KIFDEILVNA False True KIFDEILVNA 52.016849 581.329333484173 7212279.0 9264.0 nc|ENSG00000131747|P11388-4|TOP2A;;nc|ENSG00000131747|P11388-3|TOP2A;;ENSG00000131747|ENST00000423485|TOP2A;;nc|ENSG00000077097|Q02880-2|TOP2B;;TOP2B|p.K365Rfs*8|1|0.19|ENSG00000077097|chr3:25632727-25632727|T/-|frameshift_variant;;ENSG00000077097|ENST00000264331|TOP2B;;nc|ENSG00000131747|P11388-2|TOP2A 5.959021886189778 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9266 52.025 459.0 140210.0 25 0 25740.0 + -1 IIFKMWLKL 9 75 604.3665222221024 1206.718491511005 2 604.3666259646416 MULTI CID FTMS 0 0 0 9264 153727.828125 0.4242994147014903 5 -0.1490821838378906 2 Oxidation (M) _IIFKM(Oxidation (M))WLKL_ REV__ENST00000278616.8_1_11:108151731-108151785:+|nuORF 2.302733041254933 0.8342969208511092 6 C(Carbamidomethyl (C)){I|L}{I|L} 3 -1 14.693 0.0 0.0 1.2176 0.0 0.0 225.22961319244845 592.2852266900999 817.5148398825484 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)){I|L}{I|L} 1.2176 - 13 + 1 1.499 51661.3 1.0 3589 5675 9264 SUDHL4_400M_050219_2,9266 SUDHL4_400M_050219_2,9266,IIFKMWLKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9267 52.037 675.0 133410.0 25 0 18177.0 39772 VEPDYRLFV 9 94 569.3025337234604 1136.5905145137208 2 569.3033325076103 MULTI CID FTMS 0 0 0 9264 110786.21875 0.397560846509819 -3 0.0644149780273437 3 Unmodified _VEPDYRLFV_ ENSG00000112877|ENST00000264935|CEP72;nc|ENSG00000112877|Q9P209-2|CEP72 18.1463463914782 0.3454829746528889 6 [Q{I|L}]KD{M(Oxidation (M))|F}Q{I|L}{M(Oxidation (M))|F}V 9 5 + 64.914 0.0 0.0 5.7113 5.7113 84.992 0.0 0.0 0.0 7.509990043400279 16.478174818886366 7.509990043400279 7.509990043400279 0 0.5 0.958607314841775 0.0 0.3494850021680094 [Q{I|L}]KD{M(Oxidation (M))|F}Q{I|L}{M(Oxidation (M))|F}V;[AG]{I|L}KD{M(Oxidation (M))|F}Q{I|L}{M(Oxidation (M))|F}V;[Q{I|L}]KD{M(Oxidation (M))|F}[AG]{I|L}{M(Oxidation (M))|F}V;[Q{I|L}]{M(Oxidation (M))|F}DKQ{I|L}{M(Oxidation (M))|F}V;[AG]{I|L}KD{M(Oxidation (M))|F}[AG]{I|L}{M(Oxidation (M))|F}V;[AG]{M(Oxidation (M))|F}D{I|L}KQ{I|L}{M(Oxidation (M))|F}V;{[{M(Oxidation (M))|F}D]|MM}Q{I|L}KQ{I|L}{M(Oxidation (M))|F}V;[AG]D{M(Oxidation (M))|F}{I|L}KQ{I|L}{M(Oxidation (M))|F}V;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}D{I|L}KQ{I|L}{M(Oxidation (M))|F}V;[AG]{I|L}{M(Oxidation (M))|F}DKQ{I|L}{M(Oxidation (M))|F}V 5.7113;5.0505;4.9011;4.342;4.2442;3.8694;3.8595;3.7509;3.6868;3.6812 -;-;-;-;-;-;-;-;-;- 465 1 1.499 71889.8 1.0 3590 5675 9264 SUDHL4_400M_050219_2,9267 SUDHL4_400M_050219_2,9267,VEPDYRLFV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9268 52.046 535.0 131280.0 25 0 15610.0 -1 0 81 1010.972261390112 2019.929969847024 2 1011.475390613079 MULTI CID FTMS 0 0 0 9264 189890.09375 0.7607129502086849 -3 0.0644149780273437 4 6 QEEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 35.34 0.0 0.0 1.7496 0.0 0.0 934.485895593463 0.0 934.485895593463 0.0 8.42863739093027 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.4247425010840047 QEEN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 1.7496 - 439 1 1.499 52897.5 1.0 3591 5675 9264 SUDHL4_400M_050219_2,9268 SUDHL4_400M_050219_2,9268, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9270 52.064 800.0 146850.0 25 0 28540.0 + 20386 LLGPRLVLA 9 120 476.3211677308881 950.6277825285762 2 476.3214904665947 MULTI CID FTMS 0 0 0 9269 145512.390625 0.0170900557059013 17 -0.3980216979980469 1 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 46.020951573049366 0.0490941689151868 6 {I|L}{I|L}G 3 6 47.307 0.0 0.0 4.9764 0.0 0.0 0.0 664.4147432916624 664.4147432916624 10.989121012897584 0.0 0.0 0.0 0 0.3494850021680094 2.0 0.0 0.0 + {I|L}{I|L}G 4.9764 + + 134 + 1 1.499 95306.9 0.6800000071525574 3592 5676 9269 SUDHL4_400M_050219_2,9270 SUDHL4_400M_050219_2,9270,LLGPRLVLA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9271 52.078 800.0 79328.0 25 0 12278.0 -1 0 70 807.0311009382087 2418.071473414826 3 807.3650390505791 MULTI CID FTMS 0 0 0 9269 90962.875 1.0 0 0.0 2 6 {[{M(Oxidation (M))|F}H]|[RQ]}ED{M(Oxidation (M))|F}{I|L} 6 -1 36.164 0.0 0.0 1.4956 0.0 0.0 0.0 1626.705189821946 1626.705189821946 9.955678082598922 0.0 0.0 0.0 0 0.0 1.3979400086720375 0.3054621874040891 0.0 {[{M(Oxidation (M))|F}H]|[RQ]}ED{M(Oxidation (M))|F}{I|L} 1.4956 - 346 1 1.499 52662.6 0.3799999952316284 3593 5676 9269 SUDHL4_400M_050219_2,9271 SUDHL4_400M_050219_2,9271, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9273 52.092 652.0 72952.0 25 0 3911.1 -1 0 76 882.408525943936 1762.8024989546718 2 882.4081909060478 MULTI CID FTMS 0 0 0 9272 112526.1953125 0.9595574085802968 -2 0.0663261413574218 1 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YE[{I|L}V] 15 -1 + 82.074 0.0 0.0 4.6559 4.6559 80.697 0.0 0.0 0.0 7.106083117480935 65.76274388132951 7.106083117480935 6.690067809585756 0 0.5 1.3010299956639813 0.3494850021680094 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQDA{M(Oxidation (M))|F}YE[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQW{M(Oxidation (M))|F}YE[{I|L}V];[YQ]V[CS]AQQDA{M(Oxidation (M))|F}YE[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QDA{M(Oxidation (M))|F}YE[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]DA{M(Oxidation (M))|F}YE[{I|L}V];[YE][C(Carbamidomethyl (C))K]AQQDA{M(Oxidation (M))|F}YE[{I|L}V];[YQ]V[CS]AQQW{M(Oxidation (M))|F}YE[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QW{M(Oxidation (M))|F}YE[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]W{M(Oxidation (M))|F}YE[{I|L}V];[Y{M(Oxidation (M))|F}]H{[CT]|[{M(Oxidation (M))|F}G]}QQDA{M(Oxidation (M))|F}YE[{I|L}V] 4.6559;4.2764;4.1885;4.1436;4.1436;3.9089;3.809;3.763;3.763;3.7381 -;-;-;-;-;-;-;-;-;- 1641 1 1.499 41482.9 1.0 3594 5677 9272 SUDHL4_400M_050219_2,9273 SUDHL4_400M_050219_2,9273, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9274 52.1 484.0 198720.0 25 0 28926.0 + 20303 SVLDQKILL 9 113 514.8236568886723 1027.6327608441445 2 514.8212768435478 MULTI CID FTMS 0 0 0 9272 160141.0 0.5195877375756008 -7 0.1672248840332031 2 Unmodified _LLEIIFIPA_ ENSG00000142207|ENST00000382751|URB1 24.67388899826682 0.2172451872415813 6 [VS]{I|L}DQK{I|L}{I|L}{I|L} 9 8 + 75.613 0.0 0.0 7.358 7.358 85.967 0.0 0.0 0.0 3.217196696094433 3.217196696094433 3.217196696094433 3.217196696094433 0 2.1237125054200234 2.0 0.5 0.3054621874040891 [VS]{I|L}DQK{I|L}{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}{I|L}{I|L}VS{I|L};[VS]{[QG]|[NA]}{I|L}{I|L}{I|L}VS{I|L};[VS]{I|L}D[AG]K{I|L}{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}{I|L}[VS]{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}QK{I|L}{I|L}VS{I|L};[VS]{[QG]|[NA]}{I|L}{I|L}[VS]{I|L}{I|L};[VS]{I|L}{[QG]|[NA]}[VS]{I|L}{I|L}{I|L};[VS]{I|L}{[QS]|[NT]}R{I|L}{I|L}{I|L};[VS]AA[VG]{I|L}{I|L}VS{I|L} 7.358;7.0449;6.6316;6.4619;6.1934;6.1125;5.7801;5.3158;5.2859;5.2755 -;-;-;-;-;-;-;-;-;- 1675 + 1 1.499 75871.9 1.0 3595 5677 9272 SUDHL4_400M_050219_2,9274 SUDHL4_400M_050219_2,9274,LLEIIFIPA False False SVLDQKILL 52.10019 514.821276843548 1381972.125 9272.0 ENSG00000142207|ENST00000382751|URB1 3.616149584452311 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9275 52.108 446.0 168820.0 25 0 12832.0 + 44025 YIHNILYEV 9 89 582.3086797023639 1162.6028064715276 2 582.3086425662041 MULTI CID FTMS 0 0 0 9272 104364.9296875 0.6250254291990275 -1 0.0315322875976562 3 Unmodified _YIHNILYEV_ ENSG00000170456|ENST00000389082|DENND5B;nc|ENSG00000170456|Q6ZUT9-2|DENND5B;nc|ENSG00000170456|Q6ZUT9-3|DENND5B;nc|ENSG00000170456|Q6ZUT9-4|DENND5B 67.34385681178166 0.0221257235307089 6 [HN]{I|L}Y{I|L}{I|L}YEV 9 4 + 50.638 0.0 0.0 4.3556 4.3556 75.44 0.0 0.0 0.0 2.0750620263177595 9.889917747712644 2.0750620263177595 2.0750620263177595 0 0.8684151806525389 0.0 0.0 0.7059771852360797 [HN]{I|L}Y{I|L}{I|L}YEV;{[QV]|[N{I|L}]|[RA]|[KV]}HY{I|L}{I|L}YEV;[HN]{I|L}{I|L}Y{I|L}YEV;{[QV]|[N{I|L}]|[RA]|[KV]}WN{I|L}{I|L}YEV;{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}Y{I|L}YEV;[HN]{I|L}Y{I|L}Y{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}HY{I|L}Y{I|L}EV;[HN]{I|L}{I|L}YY{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}WN{I|L}Y{I|L}EV;{[QV]|[N{I|L}]|[RA]|[KV]}H{I|L}YY{I|L}EV 4.3556;4.1771;4.0967;3.9182;3.9182;3.5686;3.3901;3.3096;3.1312;3.1312 -;-;-;-;-;-;-;-;-;- 384 1 1.499 61652.4 1.0 3596 5677 9272 SUDHL4_400M_050219_2,9275 SUDHL4_400M_050219_2,9275,YIHNILYEV True True YIHNILYEV 52.108119 582.308642566204 925721.75 9272.0 nc|ENSG00000170456|Q6ZUT9-4|DENND5B;;nc|ENSG00000170456|Q6ZUT9-3|DENND5B;;ENSG00000170456|ENST00000389082|DENND5B;;nc|ENSG00000170456|Q6ZUT9-2|DENND5B 5.709572633107503 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9276 52.122 800.0 56223.0 25 0 9677.9 40130 VGLMQNTIFV 10 70 561.3041549224672 1120.5937569117343 2 561.3039428591728 MULTI CID FTMS 0 0 0 9272 100287.3828125 1.0 0 0.0 4 Unmodified _VGLMQNTIFV_ ENSG00000167291|ENST00000310924|TBC1D16;nc|ENSG00000167291|Q8TBP0-2|TBC1D16;nc|ENSG00000167291|Q8TBP0-3|TBC1D16;nc|ENSG00000167291|Q8TBP0-4|TBC1D16 25.399314129420983 0.3980215340001851 6 [Q{I|L}]KDMQ{I|L}{M(Oxidation (M))|F}V 9 6 + 40.599 0.0 0.0 3.623 3.623 81.306 0.0 0.0 0.0 3.2171966960944403 27.104634260465453 3.2171966960944403 9.208187539523756 0 0.718765315847925 0.0 0.3807196863200844 0.805462187404089 [Q{I|L}]KDMQ{I|L}{M(Oxidation (M))|F}V;[Q{I|L}]KDM[AG]{I|L}{M(Oxidation (M))|F}V 3.623;2.8013 -;- 55 1 1.499 41268.0 0.449999988079071 3597 5677 9272 SUDHL4_400M_050219_2,9276 SUDHL4_400M_050219_2,9276,VGLMQNTIFV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9277 52.129 376.0 191050.0 25 0 37323.0 19502 LFLPEIFII 9 105 552.8370284226231 1103.659503912046 2 552.8373290896416 MULTI CID FTMS 0 0 0 9272 84756.171875 0.4003247383189371 -5 0.1307411193847656 5 Unmodified _LFLPEIFII_ ENST00000570455.1_1_17:6538276-6538423:-|nuORF 63.562846038646086 0.0241094678104353 6 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KT{M(Oxidation (M))|F}{I|L}{I|L}{I|L} 9 6 + 55.829 0.0 0.0 5.0586 5.0586 81.3 0.0 0.0 0.0 4.137342758552691 33.52666143055663 4.137342758552691 5.740312677277188 0 0.6989700043360187 0.0 1.079689690656103 0.5189301784845296 {[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KT{M(Oxidation (M))|F}{I|L}{I|L}{I|L};[Q{I|L}]EKT{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KT{I|L}{M(Oxidation (M))|F}{I|L}{I|L};[{I|L}T]{M(Oxidation (M))|F}KQE{I|L}{I|L}{I|L};[{I|L}T][NG]{I|L}T{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}T{M(Oxidation (M))|F}{I|L}{I|L}{I|L};[{I|L}T][NG]T{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}KT{I|L}{M(Oxidation (M))|F}{I|L}{I|L}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}TKQE{I|L}{I|L}{I|L};[Q{I|L}]EKT{I|L}{M(Oxidation (M))|F}{I|L}{I|L} 5.0586;4.5384;4.5242;4.4823;4.3535;4.3535;4.1939;4.1939;4.1061;4.0041 -;-;-;-;-;-;-;-;-;- 812 1 1.499 59208.4 1.0 3598 5677 9272 SUDHL4_400M_050219_2,9277 SUDHL4_400M_050219_2,9277,LFLPEIFII True True FLTKQEILL 52.128713 552.837329089642 1244560.875 9272.0 ENSG00000185043|ENST00000328649|CIB1;;nc|ENSG00000185043|Q99828-2|CIB1 2.867846568425497 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9279 52.135 101.0 557640.0 25 0 63600.0 + 43043 VYFLILFH 8 64 526.3004460652469 1050.5863391972937 2 526.3006469607353 MULTI CID FTMS 0 0 0 9278 502935.21875 0.8094711776355187 3 -0.0448722839355468 1 Unmodified _VYFLILFH_ REV__ENST00000373075.6_1_1:37959208-37959391:-|nuORF 17.086550045450526 0.6584923310065985 6 [YV]{M(Oxidation (M))|F}PG 5 -1 42.971 0.0 0.0 4.0902 0.0 0.0 0.0 484.2873324029906 484.2873324029906 35.98136244196333 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [YV]{M(Oxidation (M))|F}PG 4.0902 - 30 + 1 1.499 48822.2 1.0 3599 5678 9278 SUDHL4_400M_050219_2,9279 SUDHL4_400M_050219_2,9279,VYFLILFH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9280 52.139 234.0 199020.0 25 0 20580.0 + 9734 FLYSDEVQI 9 81 557.2767081140414 1112.5388632948827 2 557.2768432497978 MULTI CID FTMS 0 0 0 9278 204686.21875 0.3375481073481848 4 -0.086669921875 2 Unmodified _FLYSDEVQI_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;nc|ENSG00000064726|Q9H0C5-2|BTBD1 38.15118350030904 0.0856056900103839 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}EVQ{I|L} 9 3 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}EV + + 17.875 9.8073 1.1492 1.6067 1.6067 50.078 0.0 0.0 0.0 0.0 -0.1844655354022961 -0.1844655354022961 0.0 0 0.0 0.0 0.0 0.3807196863200844 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[YD]|[{M(Oxidation (M))|F}M]}EVQ{I|L} 1.6067 - 109 + 1 1.499 42577.1 1.0 3600 5678 9278 SUDHL4_400M_050219_2,9280 SUDHL4_400M_050219_2,9280,FLYSDEVQI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9282 52.147 262.0 237780.0 25 0 26563.0 + 25716 NIIELVHQV 9 97 532.8087826416929 1063.6030123501855 2 532.8091308474541 MULTI CID FTMS 0 0 0 9281 112341.625 0.1969308445770464 -5 0.1579780578613281 1 Unmodified _NIIELVHQV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 32.78568957990786 0.1150597335874693 6 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHN{I|L} 9 2 + 68.71 0.0 0.0 6.4601 6.4601 85.522 0.0 0.0 0.0 21.97498719580941 5.166297960033354 5.166297960033354 5.166297960033354 0 0.805462187404089 2.0 0.0 0.5283773187068795 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHQV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VH[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}HN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}HQV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}HGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{I|L}{I|L}H[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}H[WR][PG][KG];{[QV]|[N{I|L}]|[RA]|[KV]}H[RK][DP][KG] 6.4601;5.9744;5.0976;4.6118;4.5305;4.0447;2.7686;2.2828;2.0886;2.0886 -;+;-;-;-;-;-;-;-;- + 330 + 1 1.499 53146.7 1.0 3601 5679 9281 SUDHL4_400M_050219_2,9282 SUDHL4_400M_050219_2,9282,NIIELVHQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9283 52.16 800.0 44215.0 25 0 3614.7 -1 0 53 1081.8598175804018 3242.557623341406 3 1082.528002917767 MULTI CID FTMS 0 0 0 9281 92577.5859375 0.7967213749621891 1 -0.0212745666503906 2 6 VM{[QN]|[E{I|L}]|[KN]} 4 -1 16.198 0.0 0.0 0.49954 0.0 0.0 2752.310507495893 0.0 2752.310507495893 0.0 8.723637474483468 0.0 0.0 0 0.0 0.0 0.0 0.0 VM{[QN]|[E{I|L}]|[KN]} 0.49954 - 10 1 1.499 31912.3 0.4300000071525574 3602 5679 9281 SUDHL4_400M_050219_2,9283 SUDHL4_400M_050219_2,9283, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9285 52.167 186.0 240750.0 25 0 21510.0 + 34114 SLLPQLTGA 9 81 450.263427638848 898.5123023444961 2 450.2633239626884 MULTI CID FTMS 0 0 0 9284 248641.453125 0.6786322847924441 2 -0.0549240112304687 1 Unmodified _SLLPQLTGA_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 46.020951573049366 0.0490941689151868 6 [QP]{I|L}TV 5 5 35.662 0.0 0.0 3.969 0.0 0.0 0.0 357.1788422217024 357.1788422217024 0.1599409116367667 0.0 0.0 0.0 0 0.0 1.0969100130080565 0.8494850021680094 0.0 [QP]{I|L}TV 3.969 - 149 1 1.499 38836.3 1.0 3603 5680 9284 SUDHL4_400M_050219_2,9285 SUDHL4_400M_050219_2,9285,SLLPQLTGA True True SLLPQLTGA 52.166592 450.263323962688 2937304.0 9284.0 nc|ENSG00000123338|P55160-2|NCKAP1L;;ENSG00000123338|ENST00000293373|NCKAP1L 4.417943318684896 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9286 52.174 390.0 166730.0 25 0 16209.0 + + 23412 KLIEELETL 9 96 544.3117510333221 1086.6089491334442 2 544.3151122927666 MULTI CID FTMS 0 0 0 9284 193136.640625 0.1125243833653104 15 -0.3181076049804687 2 Unmodified _LTEKWLGQL_ nc|ENSG00000095794|Q03060-10|CREM;nc|ENSG00000095794|Q03060-7|CREM;nc|ENSG00000095794|Q03060-17|CREM;nc|ENSG00000095794|Q03060-13|CREM;nc|ENSG00000095794|Q03060-1|CREM;nc|ENSG00000095794|Q03060-16|CREM;nc|ENSG00000095794|Q03060-11|CREM;nc|ENSG00000095794|Q03060-15|CREM;nc|ENSG00000095794|Q03060-29|CREM;nc|ENSG00000095794|Q03060-19|CREM;nc|ENSG00000095794|Q03060|CREM;nc|ENSG00000095794|Q03060-30|CREM;nc|ENSG00000095794|Q03060-28|CREM;ENST00000374721.7_1_10:35500449-35500728:+|nuORF;nc|ENSG00000095794|Q03060-2|CREM;nc|ENSG00000095794|Q03060-27|CREM;nc|ENSG00000095794|Q03060-22|CREM;nc|ENSG00000095794|Q03060-12|CREM;nc|ENSG00000095794|Q03060-14|CREM;nc|ENSG00000095794|Q03060-20|CREM 25.399314129420983 0.2080152500878129 6 [{I|L}T]EGV{I|L}{I|L}ET{I|L} 10 -1 + 65.459 0.0 0.0 6.0242 6.0242 81.583 0.0 0.0 0.0 2.671955026877754 9.457640437841874 2.671955026877754 2.671955026877754 0 0.6435078169319297 2.0 1.0941876774005248 0.0 [{I|L}T]EGV{I|L}{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}K{I|L}ET{I|L};[{I|L}T]EGV{I|L}E{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}TR{I|L}{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}E{I|L}KE{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}TR{I|L}E{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}EK{I|L}{I|L}ET{I|L};{[QN]|[E{I|L}]|[KN]}EK{I|L}E{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}TGV{I|L}{I|L}ET{I|L};[{I|L}T]ER{I|L}{I|L}{M(Oxidation (M))|F}[VP] 6.0242;5.7783;5.7694;5.6843;5.5235;5.4296;5.3392;5.0844;5.0382;5.0139 -;-;-;-;-;-;-;-;-;- 679 1 1.499 53334.8 1.0 3604 5680 9284 SUDHL4_400M_050219_2,9286 SUDHL4_400M_050219_2,9286,LTEKWLGQL False False KLIEELETL 52.173583 544.315112292767 1428359.25 9284.0 nc|ENSG00000095794|Q03060-10|CREM;;nc|ENSG00000095794|Q03060-7|CREM;;nc|ENSG00000095794|Q03060-17|CREM;;nc|ENSG00000095794|Q03060-13|CREM;;nc|ENSG00000095794|Q03060-1|CREM;;nc|ENSG00000095794|Q03060-16|CREM;;nc|ENSG00000095794|Q03060-11|CREM;;nc|ENSG00000095794|Q03060-15|CREM;;nc|ENSG00000095794|Q03060-29|CREM;;nc|ENSG00000095794|Q03060-19|CREM;;nc|ENSG00000095794|Q03060|CREM;;nc|ENSG00000095794|Q03060-30|CREM;;nc|ENSG00000095794|Q03060-28|CREM;;ENST00000374721.7_1_10:35500449-35500728:+|nuORF;;nc|ENSG00000095794|Q03060-2|CREM;;nc|ENSG00000095794|Q03060-27|CREM;;nc|ENSG00000095794|Q03060-22|CREM;;nc|ENSG00000095794|Q03060-12|CREM;;nc|ENSG00000095794|Q03060-14|CREM;;nc|ENSG00000095794|Q03060-20|CREM 3.8156844774882 2.0 False 9.0 True non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_2 9288 52.19 800.0 94097.0 25 0 6624.2 + + -1 MLDMSVPAV 9 111 497.7351683424905 993.455783751781 2 497.7355224490166 MULTI CID FTMS 0 0 0 9287 101366.25 0.9526675157417372 1 -0.0417976379394531 1 Oxidation (M) _WQM(Oxidation (M))DAKTV_ ENSG00000102910|ENST00000285737|LONP2 14.581692164780916 0.6954967302934248 6 {NN|[MP]|[D{I|L}]|[EV]}VAV 5 -1 25.15 0.0 0.0 2.5316 0.0 0.0 0.0 493.1450592246904 493.1450592246904 -1.4132915279646951 0.0 -1.4132915279646951 0.0 0 0.0 1.3979400086720375 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}VAV 2.5316 - 286 1 1.499 62916.7 0.949999988079071 3605 5681 9287 SUDHL4_400M_050219_2,9288 SUDHL4_400M_050219_2,9288,WQMDAKTV False False MLDMSVPAV 52.189941 497.735522449017 335049.46875 9287.0 ENSG00000102910|ENST00000285737|LONP2 0.4282637933890025 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9289 52.203 767.0 84132.0 25 0 11208.0 + 42308 VSVDEEEGI 9 95 488.7274240266103 975.4402951200206 2 488.7274047732353 MULTI CID FTMS 0 0 0 9287 88743.875 1.0 0 0.0 2 Unmodified _VSVDEEEGI_ REV__ENSG00000175931|ENST00000319380|UBE2O 16.942295170755138 0.3780752226737986 6 RV 2 -1 15.969 0.0 0.0 1.6371 0.0 0.0 129.0733650436518 588.1811544331202 717.254519476772 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 RV 1.6371 - 227 + 1 1.499 53311.4 1.0 3606 5681 9287 SUDHL4_400M_050219_2,9289 SUDHL4_400M_050219_2,9289,VSVDEEEGI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9290 52.215 701.0 102910.0 25 0 10911.0 + 40753 VLISQQWKI 9 99 557.8349511691163 1113.6553494050324 2 557.8352538943291 MULTI CID FTMS 0 0 0 9287 84100.3828125 0.8815309028616295 -1 0.0131263732910156 3 Unmodified _VLISQQWKI_ ENST00000372892.7_1_20:43211346-43218471:+|nuORF 36.12702656103203 0.0967173616627612 6 [{I|L}V]{I|L}SQQWK{I|L} 9 0 + 65.328 0.0 0.0 5.8661 5.8661 87.882 0.0 0.0 0.0 52.22865638833312 11.61159286695316 11.61159286695316 9.208187539523747 0 0.4247425010840047 2.0 0.4247425010840047 0.0 + + [{I|L}V]{I|L}SQQWK{I|L};[{I|L}V]{I|L}S[AG]QWK{I|L};[{I|L}V]{I|L}SQ[AG]WK{I|L};[{I|L}V]{I|L}SQ[WK]Q{I|L};[{I|L}V]{I|L}S[AG][AG]WK{I|L};[{I|L}V]{I|L}S[AG][WK]Q{I|L};[{I|L}V]{I|L}SQ[WK][AG]{I|L};[{I|L}V]{I|L}S{[WT]|[RM]}{[TV]|[{I|L}S]}[VP];[VP]{M(Oxidation (M))|F}{I|L}W[K{I|L}]V{I|L};[VP]{M(Oxidation (M))|F}W{I|L}[K{I|L}]V{I|L} 5.8661;5.0392;5.0392;4.4962;4.2163;3.6693;3.3555;2.1413;0.97065;0.97065 +;-;-;-;-;-;-;-;-;- + 534 + 1 1.499 62773.3 1.0 3607 5681 9287 SUDHL4_400M_050219_2,9290 SUDHL4_400M_050219_2,9290,VLISQQWKI True True VLISQQWKI 52.215387 557.835253894329 425960.59375 9287.0 ENST00000372892.7_1_20:43211346-43218471:+|nuORF 4.371596177419026 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9292 52.225 316.0 144730.0 25 0 11512.0 + 11662 GLDLGVAPTV 10 93 471.2686567364106 940.5227605396212 2 472.2751342654228 MULTI CID FTMS 0 0 0 9291 91142.5234375 0.3896152174001617 -12 0.3049049377441406 1 Unmodified _GLDLGVAPTV_ REV__ENSG00000078053|ENST00000356264|AMPH 30.63653989081413 0.2803493085145199 6 {NN|[MP]|[D{I|L}]|[EV]}G{I|L}N{I|L} 6 -1 27.635 0.0 0.0 2.9383 0.0 0.0 0.0 312.1554259051088 312.1554259051088 5.691737629967911 0.0 0.0 0.0 0 0.3054621874040891 1.5228787452803376 0.2396518287104437 0.0 {NN|[MP]|[D{I|L}]|[EV]}G{I|L}N{I|L} 2.9383 - 412 1 1.499 38633.2 1.0 3608 5682 9291 SUDHL4_400M_050219_2,9292 SUDHL4_400M_050219_2,9292,GLDLGVAPTV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9293 52.237 693.0 119510.0 25 0 8950.0 + 23118 LSPETPLEV 9 97 492.7658624516646 983.5171719701292 2 492.7654907107353 MULTI CID FTMS 0 0 0 9291 140934.546875 1.0 0 0.0 2 Unmodified _LSPETPLEV_ REV__ENSG00000129465|ENST00000216274|RIPK3 28.486842064014134 0.1687311288560894 6 AV[HA]EV 6 -1 22.88 0.0 0.0 2.3264 0.0 0.0 359.20602802657294 0.0 359.20602802657294 0.0 0.4845500650402812 0.0 0.0 0 0.0 0.0 0.5 0.0 AV[HA]EV 2.3264 - 246 + 1 1.499 69406.9 1.0 3609 5682 9291 SUDHL4_400M_050219_2,9293 SUDHL4_400M_050219_2,9293,LSPETPLEV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9294 52.242 271.0 116400.0 25 0 9272.8 + 10193 FQDPVPLTV 9 71 508.2763753798405 1014.5381978264812 2 508.2759277224541 MULTI CID FTMS 0 0 0 9291 177457.21875 0.2721428392740431 -13 0.3218650817871094 3 Unmodified _FQDPVPLTV_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 24.020572477871973 0.2255576514309169 6 [{I|L}P]TV 4 5 23.672 0.0 0.0 2.3333 0.0 0.0 0.0 601.2623548911873 601.2623548911873 7.926740567922437 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3494850021680094 0.0 + [{I|L}P]TV 2.3333 + + 120 1 1.499 30585.9 1.0 3610 5682 9291 SUDHL4_400M_050219_2,9294 SUDHL4_400M_050219_2,9294,FQDPVPLTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9296 52.258 800.0 133740.0 25 0 10420.0 + 14846 ILGIQPPSV 9 123 462.28216359613606 922.549774259072 2 462.2819702029228 MULTI CID FTMS 0 0 0 9295 86800.8203125 0.4431794393871366 5 -0.114044189453125 1 Unmodified _ILGIQPPSV_ ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8 60.38955033654506 0.025866396858536 6 {I|L}{I|L}GQ{I|L}P 6 4 48.633 0.0 0.0 5.2716 0.0 0.0 0.0 298.13971501518466 298.13971501518466 26.95046257204389 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.0 0.0 {I|L}{I|L}GQ{I|L}P 5.2716 - 289 1 1.499 83814.5 0.5699999928474426 3611 5683 9295 SUDHL4_400M_050219_2,9296 SUDHL4_400M_050219_2,9296,ILGIQPPSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9300 52.283 800.0 115720.0 25 0 15358.0 + 14617 IIHDFPQFY 9 102 590.2953090930938 1178.5760652529875 2 590.2948486208916 MULTI CID FTMS 0 0 0 9299 92629.8203125 0.894420834937929 -1 0.0040626525878906 1 Unmodified _IIHDFPQFY_ ENSG00000106399|ENST00000223129|RPA3 34.10243960390752 0.1078313939113124 6 {I|L}{I|L}HD{M(Oxidation (M))|F}PQ{M(Oxidation (M))|F}Y 9 0 + 47.317 0.0 0.0 4.0147 4.0147 77.716 0.0 0.0 0.0 5.286144654057665 11.0827208845118 5.286144654057665 5.286144654057665 0 0.8935078169319297 1.154901959985743 0.0 0.0 + + {I|L}{I|L}HD{M(Oxidation (M))|F}PQ{M(Oxidation (M))|F}Y;[HD]{M(Oxidation (M))|F}{I|L}{I|L}PQ{M(Oxidation (M))|F}Y;[HD]{I|L}{I|L}{M(Oxidation (M))|F}PQ{M(Oxidation (M))|F}Y;{I|L}{I|L}HD{M(Oxidation (M))|F}P[AG]{M(Oxidation (M))|F}Y;[HD]{I|L}{M(Oxidation (M))|F}{I|L}PQ{M(Oxidation (M))|F}Y;[HD]{M(Oxidation (M))|F}{I|L}{I|L}P[AG]{M(Oxidation (M))|F}Y;[HD]{I|L}{I|L}{M(Oxidation (M))|F}P[AG]{M(Oxidation (M))|F}Y;[QP]G[VP]{M(Oxidation (M))|F}PQ{M(Oxidation (M))|F}Y;[QP]G{[ET]|[MV]}{I|L}PQ{M(Oxidation (M))|F}Y;[HD]{I|L}{M(Oxidation (M))|F}{I|L}P[AG]{M(Oxidation (M))|F}Y 4.0147;3.5662;3.2903;3.2334;3.0348;2.7849;2.509;2.509;2.2535;2.2535 +;-;-;-;-;-;-;-;-;- + 393 1 1.499 73575.3 0.4099999964237213 3612 5686 9299 SUDHL4_400M_050219_2,9300 SUDHL4_400M_050219_2,9300,IIHDFPQFY True True IIHDFPQFY 52.282947 590.294848620892 730677.125 9299.0 ENSG00000106399|ENST00000223129|RPA3 8.860631148020426 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9301 52.297 800.0 113480.0 25 0 19787.0 + -1 YLTPGDIYV 9 84 1040.169373695213 0 1040.170336902142 PEAK CID FTMS 0 0 0 9299 83521.546875 0.745880176322223 -1 0.0040626525878906 2 nc|ENSG00000165525|O60524-5|NEMF;ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-4|NEMF 6 {M(Oxidation (M))|F}WVY{I|L}YT{I|L} 8 -1 51.993 0.0 0.0 2.5017 0.0 0.0 723.677174048826 266.07843958072505 989.7556136295512 0.0 0.0 0.0 0.0 0 0.0 0.0 1.916386562212267 0.0 {M(Oxidation (M))|F}WVY{I|L}YT{I|L} 2.5017 - 1193 + 1 1.499 69098.8 0.3899999856948852 3613 5686 9299 SUDHL4_400M_050219_2,9301 SUDHL4_400M_050219_2,9301, False False YLTPGDIYV 52.296812 1040.17033690214 353691.03125 9299.0 nc|ENSG00000165525|O60524-5|NEMF;;ENSG00000165525|ENST00000298310|NEMF;;nc|ENSG00000165525|O60524-4|NEMF 5.525468508402507 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9303 52.315 800.0 86599.0 25 0 10652.0 + 37733 TLQQPFASVF 10 98 569.3025337234604 1136.5905145137208 2 569.3020507693291 MULTI CID FTMS 0 0 0 9302 119526.4375 0.4289254765525877 9 -0.2145347595214843 1 Unmodified _TLQQPFASVF_ REV__ENSG00000120549|ENST00000376454|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-10|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-2|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-7|KIAA1217;REV__nc|ENSG00000120549|Q5T5P2-9|KIAA1217 22.736283301280096 0.4578556481593033 6 [Q{I|L}]KD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}M{M(Oxidation (M))|F}V 9 -1 [Q{I|L}]KD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}M + + 18.188 3.4333 0.39352 1.6002 1.6002 50.054 0.0 0.0 0.0 0.0 0.9767302917421006 0.0 0.0 0 0.5 0.0 0.0 0.0 [Q{I|L}]KD{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}M{M(Oxidation (M))|F}V 1.6002 - 297 + 1 1.499 57814.9 0.4699999988079071 3614 5687 9302 SUDHL4_400M_050219_2,9303 SUDHL4_400M_050219_2,9303,TLQQPFASVF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9304 52.328 800.0 241580.0 25 0 45916.0 + 30991 RLDELGGVYL 10 95 567.8115690093686 1133.608585085537 2 567.8107787966728 MULTI CID FTMS 0 0 0 9302 135292.34375 0.1116532790000317 -6 0.1232261657714843 2 Unmodified _RLDELGGVYL_ ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2 30.7034409873982 0.2788461460996952 6 [KG]QAE{I|L}GGVY{I|L} 11 4 + 69.997 0.0 0.0 6.1747 6.1747 78.758 0.0 0.0 0.0 0.4575749056067479 16.57577319177794 0.4575749056067479 0.4575749056067479 0 1.2302046884880935 0.0 0.0 0.3494850021680094 [KG]QAE{I|L}GGVY{I|L};{[QN]|[E{I|L}]|[KN]}AAE{I|L}GGVY{I|L};[KG]QAE{I|L}NVY{I|L};{[QN]|[E{I|L}]|[KN]}AAE{I|L}NVY{I|L};[KG][AG]AE{I|L}GGVY{I|L};{[QN]|[E{I|L}]|[KN]}AAE{I|L}GRY{I|L};[KG][AG]AE{I|L}NVY{I|L};{[QN]|[E{I|L}]|[KN]}[RD]{I|L}GGVY{I|L};{[QN]|[E{I|L}]|[KN]}Q[KQ]GGVY{I|L};{[QN]|[E{I|L}]|[KN]}AG[KQ]GGVY{I|L} 6.1747;6.1344;5.5947;5.5543;5.3695;5.246;4.7862;4.7824;4.3615;4.325 -;-;-;-;-;-;-;-;-;- 353 1 1.499 150342.8 0.5199999809265137 3615 5687 9302 SUDHL4_400M_050219_2,9304 SUDHL4_400M_050219_2,9304,RLDELGGVYL False True RLDELGGVYL 52.328355 567.810778796673 12988989.0 9302.0 ENSG00000118705|ENST00000237530|RPN2;;nc|ENSG00000118705|P04844-2|RPN2 7.64245080947876 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9305 52.342 800.0 44270.0 25 0 3122.9 + -1 ILDNPVVQL 9 57 1010.972261390112 2019.929969847024 2 1010.975085437298 MULTI CID FTMS 0 0 0 9302 84799.7109375 0.427994991356399 9 -0.2145347595214843 3 ENST00000489050.5_1_9:138825248-138834097:-|nuORF;ENSG00000130560|ENST00000371756|UBAC1 6 E{[QD]|[EN]|[WG]|[KD]|[RS]}N[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]} 8 -1 18.473 0.0 0.0 0.91453 0.0 0.0 1062.5455799787126 0.0 1062.5455799787126 0.0 9.009009156570688 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.0 E{[QD]|[EN]|[WG]|[KD]|[RS]}N[{I|L}P]{[QD]|[EN]|[WG]|[KD]|[RS]} 0.91453 - 120 1 1.499 34436.5 0.4000000059604645 3616 5687 9302 SUDHL4_400M_050219_2,9305 SUDHL4_400M_050219_2,9305, False False ILDNPVVQL 52.34222 1010.9750854373 241334.59375 9302.0 ENST00000489050.5_1_9:138825248-138834097:-|nuORF;;ENSG00000130560|ENST00000371756|UBAC1 1.471686879793803 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9306 52.356 800.0 18503.0 25 0 954.68 -1 0 34 1193.876914153419 3578.608913060457 3 1194.546801745892 MULTI CID FTMS 0 0 0 9302 83006.7421875 1.0 0 0.0 4 6 WQQA 4 -1 18.928 0.0 0.0 0.52892 0.0 0.0 2485.1694121833075 577.1981295221311 3062.3675417054387 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 WQQA 0.52892 - 34 + 1 1.499 19543.8 0.3400000035762787 3617 5687 9302 SUDHL4_400M_050219_2,9306 SUDHL4_400M_050219_2,9306, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9308 52.365 292.0 162060.0 25 0 19744.0 + 25809 NKRRRVSL 8 83 514.8236568886723 1027.6327608441445 2 514.8254882693291 MULTI CID FTMS 0 0 0 9307 95391.609375 0.3095041900503414 4 -0.0541534423828125 1 Unmodified _NKRRRVSL_ REV__ENST00000530174.1_1_11:65392695-65393791:+|nuORF 13.50788311687929 0.7113601687236069 6 [VS]{I|L}{[QG]|[NA]}{I|L}{I|L}V{[TV]|[{I|L}S]} 10 -1 + 42.625 0.0 0.0 4.1478 4.1478 79.583 0.0 0.0 0.0 7.112745100035639 7.269987279362624 7.112745100035639 7.112745100035639 0 0.5 1.6989700043360187 0.0 0.0 [VS]{I|L}{[QG]|[NA]}{I|L}{I|L}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}V{[QG]|[NA]}{I|L}{I|L}V{[TV]|[{I|L}S]};{NN|[MP]|[D{I|L}]|[EV]}[KQ]{I|L}{I|L}V{[TV]|[{I|L}S]};[VS]{I|L}[KS][VP]V{[TV]|[{I|L}S]};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[H{I|L}]{I|L}{I|L}V{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}V[KS][VP]V{[TV]|[{I|L}S]} 4.1478;3.4557;2.7822;2.4448;2.2734;1.7526 -;-;-;-;-;- 138 1 1.499 41687.5 1.0 3618 5688 9307 SUDHL4_400M_050219_2,9308 SUDHL4_400M_050219_2,9308,NKRRRVSL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9309 52.371 335.0 248590.0 25 0 26595.0 -1 0 82 914.435250781957 1826.855948630714 2 914.4352294802666 MULTI CID FTMS 0 0 0 9307 164434.453125 0.2157947146457772 -8 0.1956253051757812 2 6 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 96.124 0.0 0.0 5.2617 5.2617 58.233 0.0 0.0 0.0 20.37214568635765 59.90463059526341 20.37214568635765 0.0 0 0.9731975075880328 1.6989700043360187 0.0 0.6549471895720984 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EA[AG]QNA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EA[AG]QNA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQ[AG]NA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQGGA{M(Oxidation (M))|F}YKV{I|L};[YQ][EP]EAQQGGA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[KA][HM]{[{M(Oxidation (M))|F}C]|[YS]}QQNA{M(Oxidation (M))|F}YKV{I|L} 5.2617;5.2617;4.7674;4.7674;4.7674;4.7674;4.7674;4.7674;4.7674;2.7025 -;-;-;-;-;-;-;-;-;- 662 1 1.499 60301.0 1.0 3619 5688 9307 SUDHL4_400M_050219_2,9309 SUDHL4_400M_050219_2,9309, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9310 52.377 333.0 143770.0 25 0 23536.0 22886 LSCKTFIAV 9 95 491.2748945813648 980.5352362295296 2 491.2743102908134 MULTI CID FTMS 0 0 0 9307 157125.25 0.8069476995045818 -1 0.0592727661132812 3 Unmodified _LSCKTFIAV_ ENST00000375638.7_1_6:31802780-31805136:+|nuORF;ENST00000375640.7_1_6:31802864-31805014:+|nuORF;ENST00000375642.6_1_6:31802864-31804179:+|nuORF;ENST00000395789.5_1_6:31802780-31805136:+|nuORF 16.942295170755138 0.3780752226737986 6 SC(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F}AV{[TV]|[{I|L}S]} 8 6 34.175 0.0 0.0 3.4854 0.0 0.0 85.08979232002109 0.0 85.08979232002109 0.0 17.72160958700539 0.0 0.0 0 0.0 0.0 0.2059771852360797 0.0 SC(Carbamidomethyl (C)){I|L}{M(Oxidation (M))|F}AV{[TV]|[{I|L}S]} 3.4854 - 285 1 1.499 45526.9 1.0 3620 5688 9307 SUDHL4_400M_050219_2,9310 SUDHL4_400M_050219_2,9310,LSCKTFIAV False True TVMGKIFAV 52.377459 491.274310290813 852704.4375 9307.0 ENSG00000145332|ENST00000273963|KLHL8;;nc|ENSG00000145332|Q9P2G9-2|KLHL8 3.8621981938680015 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9311 52.391 800.0 104420.0 25 0 17337.0 + 20387 LLGPRLVLA 9 106 476.3211677308881 950.6277825285762 2 476.3212768435478 MULTI CID FTMS 0 0 0 9307 96249.1328125 0.0113042128876117 29 -1.0120849609375 4 Unmodified _LLGPRLVLA_ ENSG00000170348|ENST00000303575|TMED10 42.09456458481378 0.0639583784996157 6 {I|L}{I|L}G 3 6 50.317 0.0 0.0 5.2931 0.0 0.0 0.0 664.4123629205686 664.4123629205686 32.129843661361406 0.0 0.0 0.0 0 0.6505149978319906 2.0 0.0 0.0 + {I|L}{I|L}G 5.2931 + + 94 + 1 1.499 65978.9 0.4000000059604645 3621 5688 9307 SUDHL4_400M_050219_2,9311 SUDHL4_400M_050219_2,9311,LLGPRLVLA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9314 52.402 202.0 354430.0 25 0 42795.0 + 25717 NIIELVHQV 9 91 532.8087826416929 1063.6030123501855 2 532.8088256716728 MULTI CID FTMS 0 0 0 9313 234550.71875 0.4111590084226642 6 -0.1159858703613281 1 Unmodified _NIIELVHQV_ chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;ENSG00000165025|ENST00000375754|SYK;nc|ENSG00000165025|P43405-2|SYK 39.94969957227396 0.0757326808254658 6 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHN{I|L} 9 2 + 66.48 0.0 0.0 6.2504 6.2504 90.834 0.0 0.0 0.0 46.426681624901335 6.966911327498352 6.966911327498352 11.60470582662819 0 0.8494850021680094 2.0 0.3807196863200844 0.2396518287104437 {[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHN{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}E{I|L}VHGG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}C(Carbamidomethyl (C))H[{I|L}V][VP];{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}[CG]H[{I|L}V][VP] 6.2504;5.1594;3.2608;2.3951 -;-;-;- 182 + 1 1.499 58750.6 1.0 3622 5690 9313 SUDHL4_400M_050219_2,9314 SUDHL4_400M_050219_2,9314,NIIELVHQV True True NIIELVHQV 52.401761 532.808825671673 5219927.0 9313.0 chr9:90827579-90843858|43|29.02|0.54|5.74|+|ENST00000375746|SYK,SYK;;nc|ENSG00000165025|P43405-2|SYK;;ENSG00000165025|ENST00000375754|SYK 7.097297191619873 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9315 52.406 234.0 360080.0 25 0 52135.0 38256 TPVQTVTIVQ 10 89 543.3120778198006 0 543.3113281130791 PEAK CID FTMS 0 0 0 9313 160184.578125 1.0 0 0.0 2 Unmodified _TPVQTVTIVQ_ ENSG00000141568|ENST00000335255|FOXK2;nc|ENSG00000141568|Q01167-2|FOXK2 30.63653989081413 0.2106260509139429 6 VEQT 4 8 15.495 0.0 0.0 1.4287 0.0 0.0 542.3032195050324 82.06682764224843 624.3700471472808 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.7059771852360797 VEQT 1.4287 - 142 + 1 1.499 66986.7 1.0 3623 5690 9313 SUDHL4_400M_050219_2,9315 SUDHL4_400M_050219_2,9315,TPVQTVTIVQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9318 52.419 324.0 126960.0 25 0 14966.0 + 19620 LGDLVAQFT 9 78 482.2591853470451 962.5038177608902 2 482.2594482302666 MULTI CID FTMS 0 0 0 9317 65658.296875 0.6553644516730183 1 -0.0339546203613281 1 Unmodified _LGDLVAQFT_ REV__ENSG00000204478|ENST00000602960|PRAMEF20 16.149105407346934 0.3995459350917656 6 {[VA]|[{I|L}G]}D{I|L}V 5 -1 46.823 0.0 0.0 4.8647 0.0 0.0 0.0 462.1965731256469 462.1965731256469 33.72363747448347 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 {[VA]|[{I|L}G]}D{I|L}V 4.8647 + + 107 + 1 1.499 39156.6 1.0 3624 5692 9317 SUDHL4_400M_050219_2,9318 SUDHL4_400M_050219_2,9318,LGDLVAQFT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9319 52.432 764.0 112580.0 25 0 11860.0 + 34106 SLLPEGPPAI 10 101 497.2843604163783 992.5541678995564 2 497.2841369509697 MULTI CID FTMS 0 0 0 9317 86760.2421875 0.6994329492784548 -1 0.0040702819824218 2 Unmodified _SLLPEGPPAI_ ENSG00000051108|ENST00000439977|HERPUD1;nc|ENSG00000051108|Q15011-2|HERPUD1;nc|ENSG00000051108|Q15011-3|HERPUD1;nc|ENSG00000051108|Q15011-4|HERPUD1 54.773552608820026 0.052133998764723 6 {[TV]|[{I|L}S]}VPG 5 6 40.671 0.0 0.0 4.0976 0.0 0.0 0.0 536.2735331429893 536.2735331429893 21.92054973412325 0.0 0.0 0.0 0 0.5 1.6989700043360187 0.4957416651753049 0.0 {[TV]|[{I|L}S]}VPG 4.0976 - 587 1 1.499 68446.4 1.0 3625 5692 9317 SUDHL4_400M_050219_2,9319 SUDHL4_400M_050219_2,9319,SLLPEGPPAI True True SLLPEGPPAI 52.431867 497.28413695097 997741.75 9317.0 nc|ENSG00000051108|Q15011-4|HERPUD1;;nc|ENSG00000051108|Q15011-2|HERPUD1;;nc|ENSG00000051108|Q15011-3|HERPUD1;;ENSG00000051108|ENST00000439977|HERPUD1 5.101158142089844 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9320 52.444 710.0 141600.0 25 0 17016.0 + 37898 TLWPEVQKL 9 127 557.3188691838084 1112.6231854344169 2 557.3184081912041 MULTI CID FTMS 0 0 0 9317 97834.8046875 0.1709608699170804 -13 0.2710533142089844 3 Unmodified _TLWPEVQKL_ ENSG00000134759|ENST00000358232|ELP2;ENST00000541294.1_1_18:33739943-33744659:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 62.57269311338072 0.0246576765497938 6 [{I|L}T]WPEVQK{I|L} 9 0 + 67.705 0.0 0.0 6.0852 6.0852 88.533 0.0 0.0 0.0 47.06994074453036 10.590992953673537 10.590992953673537 9.208187539523747 0 0.75 1.6989700043360187 0.2302046884880938 1.1861818737241734 + + [{I|L}T]WPEVQK{I|L};[{I|L}T]WPEV[AG]K{I|L};[{I|L}T]W{I|L}[DP]QK{I|L};[{I|L}T]W{I|L}[DP][AG]K{I|L};{[QN]|[E{I|L}]|[KN]}K[QT]{I|L}W[VP];{[QN]|[E{I|L}]|[KN]}K[WR]W[VP];[{I|L}T]WRRW[VP];[{I|L}T][VG][QT]{I|L}W[VP];{[QN]|[E{I|L}]|[KN]}K[QT]{I|L}{[DA]|[EG]}[VP];[KQ]{I|L}{[ET]|[MV]}{I|L}W[VP] 6.0852;5.2575;4.6063;3.7787;3.4317;3.406;3.287;2.9768;2.6041;2.0282 +;-;-;-;-;-;-;-;-;- + 1203 + 1 1.499 80528.4 1.0 3626 5692 9317 SUDHL4_400M_050219_2,9320 SUDHL4_400M_050219_2,9320,TLWPEVQKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9323 52.46 527.0 237530.0 25 0 18239.0 + 29594 QLVDIIEKV 9 108 528.8188521309435 1055.6231513286868 2 528.8187133669853 MULTI CID FTMS 0 0 0 9322 180161.5 0.2718768671831784 -3 0.0420913696289062 1 Unmodified _QLVDIIEKV_ ENSG00000131467|ENST00000590720|PSME3;ENST00000593111.1_1_17:40986588-40991030:+|nuORF;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3 74.19965305603844 0.0194755241623067 6 [Q{I|L}]VD{I|L}{I|L}EKV 9 0 + 81.864 0.0 0.0 7.755 7.755 88.557 0.0 0.0 0.0 22.37643016799588 5.280287236002437 5.280287236002437 5.280287236002437 0 1.3737125054200234 1.5228787452803376 0.805462187404089 0.1989700043360188 + + [Q{I|L}]VD{I|L}{I|L}EKV;[Q{I|L}]VD{I|L}{I|L}EVK;[Q{I|L}]VD{I|L}{I|L}AAT{I|L};{NN|[MP]|[D{I|L}]|[EV]}K{[HG]|PP}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[TV]|[{I|L}S]}G[RH]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{NN|[MP]|[D{I|L}]|[EV]}KNVK[Q{I|L}]V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}EVK[Q{I|L}]V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{[HG]|PP}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}VEK[Q{I|L}]V;{I|L}{I|L}DEVK[Q{I|L}]V 7.755;7.2548;4.9881;2.3549;2.3132;2.1616;2.1119;2.0597;1.8817;1.7716 +;-;-;-;-;-;-;-;-;- + 948 + 1 1.499 104335.4 1.0 3627 5694 9322 SUDHL4_400M_050219_2,9323 SUDHL4_400M_050219_2,9323,QLVDIIEKV True True QLVDIIEKV 52.46008 528.818713366985 6698986.5 9322.0 ENST00000593111.1_1_17:40986588-40991030:+|nuORF;;ENSG00000131467|ENST00000590720|PSME3;;nc|ENSG00000131467|P61289-2|PSME3;;nc|ENSG00000131467|P61289-3|PSME3 5.390149434407552 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9324 52.467 371.0 196830.0 25 0 21323.0 -1 0 87 881.9067372048643 1761.7989214765284 2 881.9138061404228 MULTI CID FTMS 0 0 0 9322 119118.7109375 0.0762734588286067 55 -1.806232452392578 2 6 AV{I|L}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 7 -1 36.827 0.0 0.0 2.0903 0.0 0.0 1061.4113004821909 0.0 1061.4113004821909 0.0 23.410838337099165 0.0 0.0 0 0.0 0.0 0.6861818737241735 0.0 AV{I|L}AA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 2.0903 - 2382 + 1 1.499 53417.1 1.0 3628 5694 9322 SUDHL4_400M_050219_2,9324 SUDHL4_400M_050219_2,9324, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9325 52.479 676.0 104900.0 25 0 11561.0 + 9429 FLADPSAFVAA 11 93 554.7873279413354 1107.5601029494708 2 554.7875854372978 MULTI CID FTMS 0 0 0 9322 94977.5234375 0.1160443708253753 -3 0.0420913696289062 3 Unmodified _FLADPSAFVAA_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000496593.5_1_11:61404148-61405105:+|nuORF;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 58.6788170122104 0.0745071270787045 6 [PS]A{M(Oxidation (M))|F}VEA{M(Oxidation (M))|F}VAA 11 5 + 56.062 0.0 0.0 5.0618 5.0618 76.379 0.0 0.0 0.0 1.3084221310348454 5.778876285216903 1.3084221310348454 1.3084221310348454 0 0.25 0.0 1.9361818737241727 0.0 [PS]A{M(Oxidation (M))|F}VEA{M(Oxidation (M))|F}VAA;{[VA]|[{I|L}G]}[MT]VEA{M(Oxidation (M))|F}VAA;[PS]A{M(Oxidation (M))|F}D{I|L}A{M(Oxidation (M))|F}VAA;{[VA]|[{I|L}G]}[MT]D{I|L}A{M(Oxidation (M))|F}VAA;[PS]A{M(Oxidation (M))|F}DA{I|L}{M(Oxidation (M))|F}VAA;{[VA]|[{I|L}G]}[MT]DA{I|L}{M(Oxidation (M))|F}VAA;[PS]A{M(Oxidation (M))|F}{I|L}DA{M(Oxidation (M))|F}VAA;{[VA]|[{I|L}G]}[MT]{I|L}DA{M(Oxidation (M))|F}VAA;{[MS]|[{M(Oxidation (M))|F}A]}[PS]VEA{M(Oxidation (M))|F}VAA;[PS]A{M(Oxidation (M))|F}DA{M(Oxidation (M))|F}{I|L}VAA 5.0618;4.9436;4.5182;4.4;4.3835;4.2654;4.1589;4.0407;3.8031;3.4564 -;-;-;-;-;-;-;-;-;- 1212 1 1.499 62216.6 1.0 3629 5694 9322 SUDHL4_400M_050219_2,9325 SUDHL4_400M_050219_2,9325,FLADPSAFVAA True True FLADPSAFVAA 52.478557 554.787585437298 5607043.0 9322.0 ENST00000496593.5_1_11:61404148-61405105:+|nuORF;;ENSG00000089157|ENST00000392514|RPLP0;;nc|ENSG00000213553|Q8NHW5|RPLP0P6;;nc|ENSG00000089157|P05388-2|RPLP0 3.987614949544271 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9327 52.483 47.0 809650.0 25 0 61974.0 + 11659 GLDIPTVQV 9 65 471.2686567364106 940.5227605396212 2 471.2689086794853 MULTI CID FTMS 0 0 0 9326 996667.875 0.8140927243682093 2 -0.1010589599609375 1 Unmodified _GLDIPTVQV_ ENSG00000105671|ENST00000247003|DDX49;ENST00000601772.1_1_19:19035054-19035967:+|nuORF 26.88365393820708 0.1891292719743517 6 {[VA]|[{I|L}G]}D{I|L} 4 5 35.802 0.0 0.0 3.8066 0.0 0.0 0.0 539.28317248714 539.28317248714 22.754537344402905 0.0 0.0 0.0 0 0.5 2.0 0.0 0.0 + {[VA]|[{I|L}G]}D{I|L} 3.8066 + + 108 1 1.499 36666.0 1.0 3630 5695 9326 SUDHL4_400M_050219_2,9327 SUDHL4_400M_050219_2,9327,GLDIPTVQV False True GLDIPTVQV 52.483354 471.268908679485 7243134.5 9326.0 ENSG00000105671|ENST00000247003|DDX49;;ENST00000601772.1_1_19:19035054-19035967:+|nuORF 5.382599194844564 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9328 52.498 800.0 65811.0 25 0 24334.0 + 5473 DLRRRKVNTQK 11 62 707.4241705723448 1412.8337882114895 2 707.4246093630791 MULTI CID FTMS 0 0 0 9326 119946.359375 0.8709885125599838 -1 0.0303077697753906 2 Unmodified _DLRRRKVNTQK_ REV__ENST00000431677.1_1_X:100673784-100702742:+|nuORF 0.3506318815782774 0.8734936314171269 6 {I|L} 1 -1 10.0 0.0 0.0 0.7078 0.0 0.0 1281.7389986380504 0.0 1281.7389986380504 0.0 7.525749891599531 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.7078 + + 8 + 1 1.499 52086.6 0.4600000083446502 3631 5695 9326 SUDHL4_400M_050219_2,9328 SUDHL4_400M_050219_2,9328,DLRRRKVNTQK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9329 52.511 800.0 119860.0 25 0 47240.0 + 20702 LLRRHRSWK 9 88 417.9222605045584 1250.7449521138751 3 417.9220153689384 MULTI CID FTMS 0 0 0 9326 113592.9765625 0.5756732829952319 -2 0.0343742370605468 3 Unmodified _LLRRHRSWK_ REV__ENSG00000171954|ENST00000269703|CYP4F22 4.75600775471527 0.7486543447549536 6 {I|L} 1 -1 3.9794 0.0 0.0 0.31816 0.0 0.0 833.5298775062566 301.10849939517817 1134.6383769014349 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.31816 + + 18 + 1 1.499 80319.1 0.4199999868869781 3632 5695 9326 SUDHL4_400M_050219_2,9329 SUDHL4_400M_050219_2,9329,LLRRHRSWK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9331 52.516 77.0 438050.0 25 0 32865.0 + 10194 FQDPVPLTV 9 67 508.2763753798405 1014.5381978264812 2 508.2767211794853 MULTI CID FTMS 0 0 0 9330 553496.5 0.8488249173478347 1 -0.0682792663574218 1 Unmodified _FQDPVPLTV_ ENSG00000122779|ENST00000343526|TRIM24;nc|ENSG00000122779|O15164-2|TRIM24 31.26834338654808 0.1333407332142048 6 [{I|L}P]TV[CS][VP]{[TV]|[{I|L}S]} 10 7 + 33.702 0.0 0.0 3.3219 3.3219 75.223 0.0 0.0 0.0 4.771212547196623 2.727562184969372 2.727562184969372 4.771212547196623 0 0.5 1.3979400086720375 0.3807196863200844 0.0 [{I|L}P]TV[CS][VP]{[TV]|[{I|L}S]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DPV[{I|L}P]{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[CS]PV[{I|L}P]{[TV]|[{I|L}S]};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}PV[{I|L}P]{[TV]|[{I|L}S]};[{I|L}P][DN]{M(Oxidation (M))|F}[{I|L}P]{[TV]|[{I|L}S]};{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}DP{I|L}[VP]{[TV]|[{I|L}S]};[VP]DQ{M(Oxidation (M))|F}[{I|L}P]{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}[CS]P{I|L}[VP]{[TV]|[{I|L}S]};{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}P{I|L}[VP]{[TV]|[{I|L}S]};[VP]D[AG]{M(Oxidation (M))|F}[{I|L}P]{[TV]|[{I|L}S]} 3.3219;2.8516;2.612;2.4594;2.2858;2.1796;2.0503;1.9401;1.7874;1.1427 -;+;-;-;-;-;-;-;-;- + 147 1 1.499 32104.2 1.0 3633 5696 9330 SUDHL4_400M_050219_2,9331 SUDHL4_400M_050219_2,9331,FQDPVPLTV False True FQDPVPLTV 52.516135 508.276721179485 9883822.0 9330.0 nc|ENSG00000122779|O15164-2|TRIM24;;ENSG00000122779|ENST00000343526|TRIM24 7.196752389272054 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9332 52.522 333.0 250860.0 25 0 35650.0 + 24170 LYTLSTLLSKL 11 58 626.3796021825198 1250.7446514318394 2 626.3798705935478 MULTI CID FTMS 0 0 0 9330 168940.171875 0.6691407525709248 -1 0.0327796936035156 2 Unmodified _LYTLSTLLSKL_ REV__ENST00000355315.7_2_8:57130481-57130601:+|nuORF 2.9952420565917617 0.861016188266951 6 M 1 -1 3.9794 0.0 0.0 0.31816 0.0 0.0 660.4069571953145 456.27536951236567 1116.6823267076802 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.31816 - 2 + 1 1.499 68024.7 1.0 3634 5696 9330 SUDHL4_400M_050219_2,9332 SUDHL4_400M_050219_2,9332,LYTLSTLLSKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9333 52.53 429.0 225000.0 25 0 29994.0 + 33881 SLFPGKLEV 9 77 495.2870428723804 988.5595328115608 2 495.2870056033134 MULTI CID FTMS 0 0 0 9330 161794.59375 0.166343474382808 -6 0.1159858703613281 3 Unmodified _SLFPGKLEV_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 26.268140514670165 0.1969607489560049 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}PGG 9 6 56.169 0.0 0.0 5.6819 0.0 0.0 0.0 68.05130182437733 68.05130182437733 42.673968982057104 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}PGG 5.6819 - 226 + 1 1.499 80451.1 1.0 3635 5696 9330 SUDHL4_400M_050219_2,9333 SUDHL4_400M_050219_2,9333,SLFPGKLEV False True SLFPGKLEV 52.529812 495.287005603313 25694502.0 9330.0 nc|ENSG00000177731|Q13045-3|FLII;;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;;ENSG00000177731|ENST00000327031|FLII;;nc|ENSG00000177731|Q13045-2|FLII 3.386484066645304 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9334 52.542 712.0 134980.0 25 0 16823.0 + 29313 QILDGIHYL 9 128 536.2953369863425 1070.5761210394849 2 536.2956420779228 MULTI CID FTMS 0 0 0 9330 90563.78125 1.0 0 0.0 4 Unmodified _QILDGIHYL_ ENSG00000132964|ENST00000381527|CDK8;ENSG00000155111|ENST00000368911|CDK19;nc|ENSG00000132964|P49336-2|CDK8;nc|ENSG00000155111|Q9BWU1-2|CDK19 50.855029805455786 0.0384952370514206 6 [Q{I|L}]{I|L}DG{I|L}HY{I|L} 9 0 + 50.033 0.0 0.0 4.6734 4.6734 80.306 0.0 0.0 0.0 23.46787486224656 11.092437480817807 11.092437480817807 6.210149894766701 0 0.5484550065040282 1.6989700043360187 0.4247425010840047 0.0 + + [Q{I|L}]{I|L}DG{I|L}HY{I|L};[Q{I|L}]{I|L}{[RE]|[WV]}HY{I|L};[Q{I|L}]AH{I|L}[DV]Y{I|L};[Q{I|L}]{I|L}{[VA]|[{I|L}G]}DHY{I|L};[Q{I|L}]A[{I|L}V]DHY{I|L};[Q{I|L}]{I|L}DG{I|L}[WQ]V;[Q{I|L}]{I|L}[HA][DV]Y{I|L};[Q{I|L}]{I|L}{[RE]|[WV]}[WQ]V;[Q{I|L}]{I|L}{[VA]|[{I|L}G]}D[WQ]V;[Q{I|L}]A[{I|L}V]D[WQ]V 4.6734;4.0934;4.0205;3.8549;3.7394;3.054;2.6658;2.4739;2.2355;2.1199 +;-;-;-;-;-;-;-;-;- + 528 + 1 1.499 78162.1 1.0 3636 5696 9330 SUDHL4_400M_050219_2,9334 SUDHL4_400M_050219_2,9334,QILDGIHYL True True QILDGIHYL 52.542179 536.295642077923 406896.5 9330.0 ENSG00000132964|ENST00000381527|CDK8;;nc|ENSG00000155111|Q9BWU1-2|CDK19;;nc|ENSG00000132964|P49336-2|CDK8;;ENSG00000155111|ENST00000368911|CDK19 3.6279164950052896 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9335 52.553 630.0 227050.0 25 0 61371.0 + 9634 FLMPTSSEL 9 91 1024.5030939320727 1023.4958174654728 1 1024.505908191204 MULTI CID FTMS 0 0 0 9330 132819.34375 0.5497134943893635 -1 0.0327796936035156 5 Unmodified _FLMPTSSEL_ ENSG00000151849|ENST00000381884|CENPJ;nc|ENSG00000151849|Q9HC77-2|CENPJ 92.8221339359638 0.0138398038803217 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MSGPME{I|L} 9 4 + 61.502 0.0 0.0 6.009 6.009 78.74 0.0 0.0 0.0 4.066818653688529 12.613168458567683 4.066818653688529 0.7660625688767198 0 0.0 0.0 1.7856668758921828 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MSGPME{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MSGPEM{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MPTSSE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSTPME{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSTPEM{I|L};WWE{I|L}M{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MS[TP]SE{I|L};WWE{I|L}{M(Oxidation (M))|F}M{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}M{[RE]|[WV]}SE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}MSGPE{M(Oxidation (M))|F}P 6.009;5.9341;5.7304;5.5845;5.5097;5.0084;4.9958;4.8363;4.8015;4.7589 -;-;+;-;-;-;-;-;-;- + 2720 1 1.499 98502.2 1.0 3637 5696 9330 SUDHL4_400M_050219_2,9335 SUDHL4_400M_050219_2,9335,FLMPTSSEL True True FLMPTSSEL 52.55321 1024.5059081912 1187857.375 9330.0 nc|ENSG00000151849|Q9HC77-2|CENPJ;;ENSG00000151849|ENST00000381884|CENPJ 7.795328299204509 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9336 52.566 724.0 220620.0 25 0 39156.0 -1 LFICKLTF 8 109 521.2959242128364 0 521.2960082888603 PEAK CID FTMS 0 0 0 9330 111795.9765625 0.5395973357327697 -1 0.0327796936035156 6 Carbamidomethyl (C) _LFIC(Carbamidomethyl (C))KLTF_ ENSG00000154438|ENST00000284629|ASZ1;nc|ENSG00000154438|Q8WWH4-2|ASZ1 32.116972079565 0.2111542247894177 6 TVT[KG]E 6 -1 23.817 0.0 0.0 2.2889 0.0 0.0 165.09252902343889 257.1298886818868 422.22241770532565 0.0 0.0 0.0 0.0 0 0.0 0.0 1.079689690656103 0.0 TVT[KG]E 2.2889 - 480 + 1 1.499 124817.6 1.0 3638 5696 9330 SUDHL4_400M_050219_2,9336 SUDHL4_400M_050219_2,9336,LFICKLTF False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9337 52.58 800.0 136040.0 25 0 19778.0 + 9694 FLSAVDVHL 9 116 500.7768817961546 999.5392106591092 2 500.7768737673759 MULTI CID FTMS 0 0 0 9330 97843.6015625 0.6825625389882559 -1 0.0327796936035156 7 Unmodified _FLSAVDVHL_ ENST00000240618.10_1_12:10541419-10542549:-|nuORF;ENST00000585711.5_1_12:10541419-10558453:-|nuORF;ENST00000586581.5_1_12:10541419-10560248:-|nuORF 57.47134341890925 0.0274820932774257 6 {M(Oxidation (M))|F}{I|L}SAVDVH{I|L} 9 0 + 64.422 0.0 0.0 6.4452 6.4452 81.613 0.0 0.0 0.0 9.921525057367404 1.7609125905568137 1.7609125905568137 1.7609125905568137 0 0.7302046884880937 0.0 0.4247425010840047 0.0 + + {M(Oxidation (M))|F}{I|L}SAVDVH{I|L};{M(Oxidation (M))|F}{I|L}SAVDV{I|L}H;{M(Oxidation (M))|F}{I|L}SAVD[H{I|L}]V;[HV][{M(Oxidation (M))|F}V]VAS{I|L}E;{M(Oxidation (M))|F}{I|L}{I|L}[SG]DVH{I|L};{M(Oxidation (M))|F}{I|L}{I|L}[SG]DV{I|L}H;{M(Oxidation (M))|F}{I|L}{I|L}[SG]D[H{I|L}]V;[HV][{M(Oxidation (M))|F}V][SG]{I|L}{I|L}E;{M(Oxidation (M))|F}{I|L}WWVH{I|L};{M(Oxidation (M))|F}{I|L}WWV{I|L}H 6.4452;6.269;5.0166;4.9307;4.9241;4.7479;3.4955;3.4095;3.4088;3.2326 +;-;-;-;-;-;-;-;-;- + 329 + 1 1.499 87233.0 0.4199999868869781 3639 5696 9330 SUDHL4_400M_050219_2,9337 SUDHL4_400M_050219_2,9337,FLSAVDVHL True True FLSAVDVHL 52.5796 500.776873767376 697107.75 9330.0 ENST00000586581.5_1_12:10541419-10560248:-|nuORF;;ENST00000585711.5_1_12:10541419-10558453:-|nuORF;;ENST00000240618.10_1_12:10541419-10542549:-|nuORF 6.134733994801839 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9339 52.586 95.0 637930.0 25 0 114290.0 + 30992 RLDELGGVYL 10 59 567.8115690093686 1133.608585085537 2 567.8116943240166 MULTI CID FTMS 0 0 0 9338 566774.0 0.4677439520812796 4 -0.2068443298339843 1 Unmodified _RLDELGGVYL_ ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2 19.62595529434964 0.5182375435722777 6 E{I|L}GGVY{I|L} 7 3 54.456 0.0 0.0 4.8038 0.0 0.0 384.2128468244157 0.0 384.2128468244157 0.0 47.46661994673893 0.0 0.0 0 0.8494850021680094 0.0 0.0 0.0 + E{I|L}GGVY{I|L} 4.8038 + + 56 1 1.499 52881.9 1.0 3640 5697 9338 SUDHL4_400M_050219_2,9339 SUDHL4_400M_050219_2,9339,RLDELGGVYL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9340 52.599 800.0 117800.0 25 0 26352.0 + 9635 FLMPTSSEL 9 68 1040.4972448059248 1039.4899683393248 1 1040.498217761517 MULTI CID FTMS 0 0 0 9338 65670.9609375 0.5554623237534022 8 -0.3450088500976562 2 Oxidation (M) _FLM(Oxidation (M))PTSSEL_ ENSG00000151849|ENST00000381884|CENPJ;nc|ENSG00000151849|Q9HC77-2|CENPJ 64.23631603340823 0.0237365939569086 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}[TP]SSE{I|L} 9 0 + 50.497 0.0 0.0 4.8579 4.8579 81.185 0.0 0.0 0.0 4.762036441594191 18.642711996182868 4.762036441594191 6.503924710485904 0 0.8807196863200843 0.0 1.411954370472159 0.0 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}[TP]SSE{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}T{[TV]|[{I|L}S]}{M(Oxidation (M))|F}SE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}[QP]{M(Oxidation (M))|F}E{I|L};WWE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WW{M(Oxidation (M))|F}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}[QP]E{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}WWE{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{[RE]|[WV]}SE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SS[TP]{M(Oxidation (M))|F}E{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SS[TP]E{M(Oxidation (M))|F}{I|L} 4.8579;4.2322;4.0459;4.0421;4.0384;4.0378;4.0303;4.0145;3.8069;3.7989 +;-;-;-;-;-;-;-;-;- + 723 1 1.499 66810.2 0.9700000286102296 3641 5697 9338 SUDHL4_400M_050219_2,9340 SUDHL4_400M_050219_2,9340,FLMPTSSEL True False FLMPTSSEL 52.599447 1040.49821776152 768053.875 9338.0 nc|ENSG00000151849|Q9HC77-2|CENPJ;;ENSG00000151849|ENST00000381884|CENPJ 7.710565408070882 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9341 52.606 370.0 202840.0 25 0 9380.8 -1 0 100 966.9629772845273 1931.9114016358544 2 967.4664184451104 MULTI CID FTMS 0 0 0 9338 150695.90625 0.1756570599052597 -3 0.1313667297363281 3 6 [NP]{I|L}NMWA[HV]WN{I|L}DP[EP] 16 -1 + 58.647 0.0 0.0 3.0357 3.0357 69.863 0.0 0.0 0.0 0.8739548644804813 0.8739548644804813 0.8739548644804813 0.8739548644804813 0 0.0 1.0457574905606752 0.3807196863200844 0.3807196863200844 [NP]{I|L}NMWA[HV]WN{I|L}DP[EP];[MN]PN{I|L}NAD[{M(Oxidation (M))|F}E]{I|L}{I|L}VQ[WE];[NP]{I|L}NM[VS]A[HV]DAN{I|L}DP[EP];[MN]PN{I|L}NAD[{M(Oxidation (M))|F}E]{I|L}V{I|L}Q[WE];[MN]PN{I|L}NAD[{M(Oxidation (M))|F}E]{I|L}{I|L}VAG[WE];[MN]PN{I|L}NAD[{M(Oxidation (M))|F}E]{I|L}V{I|L}AG[WE];[MN]PN{I|L}NAD[{M(Oxidation (M))|F}E]{I|L}AV{I|L}G[WE];[NP]{I|L}NM[VS]A[HV]DYES{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[NP]{I|L}NMWA[HV]DAN{[HG]|PP}{I|L}{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[MN]PN{I|L}NAD[{M(Oxidation (M))|F}E]{I|L}{I|L}G{I|L}G[WE] 3.0357;2.9905;2.9181;2.9148;2.8946;2.819;2.707;2.6956;2.6837;2.6569 -;-;-;-;-;-;-;-;-;- 4800 1 1.499 55680.1 1.0 3642 5697 9338 SUDHL4_400M_050219_2,9341 SUDHL4_400M_050219_2,9341, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9342 52.62 800.0 125100.0 25 0 31582.0 39504 VASLNRRIQLV 11 83 634.8931408969943 1267.7717288607885 2 634.8930541872978 MULTI CID FTMS 0 0 0 9338 133418.859375 1.0 0 0.0 4 Unmodified _VASLNRRIQLV_ CON__Q3SX28;ENSG00000140416|ENST00000403994|TPM1;ENSG00000143549|ENST00000651641|TPM3;ENSG00000198467|ENST00000645482|TPM2;ENST00000471212.5_1_9:35684790-35689844:-|nuORF;ENST00000473036.2_1_1:154145382-154155604:-|nuORF;ENST00000558868.5_1_15:63340774-63353139:+|nuORF;ENST00000560975.5_1_15:63335715-63353895:+|nuORF;nc|ENSG00000140416|P09493-10|TPM1;nc|ENSG00000140416|P09493-2|TPM1;nc|ENSG00000140416|P09493-3|TPM1;nc|ENSG00000140416|P09493-4|TPM1;nc|ENSG00000140416|P09493-5|TPM1;nc|ENSG00000140416|P09493-6|TPM1;nc|ENSG00000140416|P09493-7|TPM1;nc|ENSG00000140416|P09493-8|TPM1;nc|ENSG00000140416|P09493-9|TPM1;nc|ENSG00000143549|P06753-2|TPM3;nc|ENSG00000143549|P06753-3|TPM3;nc|ENSG00000143549|P06753-4|TPM3;nc|ENSG00000143549|P06753-5|TPM3;nc|ENSG00000143549|P06753-6|TPM3;nc|ENSG00000198467|P07951-2|TPM2;nc|ENSG00000198467|P07951-3|TPM2 2.6312355333042263 0.8627335947654684 6 Y 1 11 10.485 0.0 0.0 0.82701 0.0 0.0 1086.6972945119587 0.0 1086.6972945119587 0.0 3.7371250542002334 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.82701 - 34 + 1 1.499 80091.6 0.5199999809265137 3643 5697 9338 SUDHL4_400M_050219_2,9342 SUDHL4_400M_050219_2,9342,VASLNRRIQLV False False False False contaminant PXD020620_cell_line SUDHL4_400M_050219_2 9343 52.634 800.0 140480.0 25 0 9735.8 + 30534 RELEKLFQL 9 116 588.3420118009501 1174.6694706687 2 588.3426391482353 MULTI CID FTMS 0 0 0 9338 126248.9921875 1.0 0 0.0 5 Unmodified _RELEKLFQL_ ENSG00000164611|ENST00000352433|PTTG1;ENST00000519287.1_1_5:159849240-159855685:+|nuORF;nc|ENSG00000213005|Q9NZH4|PTTG3P 32.037481411007896 0.1235546156350648 6 {[QN]|[E{I|L}]|[KN]}REK{I|L}{M(Oxidation (M))|F}Q{I|L} 9 2 + 55.684 0.0 0.0 4.7404 4.7404 77.674 0.0 0.0 0.0 5.642492736872597 39.51335651524651 5.642492736872597 3.0102999566398125 0 0.3807196863200844 0.0 0.805462187404089 0.0 {[QN]|[E{I|L}]|[KN]}REK{I|L}{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}RTR{I|L}{M(Oxidation (M))|F}Q{I|L};{[RE]|[WV]}{I|L}EK{I|L}{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}REK{I|L}{M(Oxidation (M))|F}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}RTR{I|L}{M(Oxidation (M))|F}[AG]{I|L};{[QN]|[E{I|L}]|[KN]}RT[VG]{I|L}{M(Oxidation (M))|F}Q{I|L};{[RE]|[WV]}{I|L}EK{I|L}{M(Oxidation (M))|F}[AG]{I|L};{[RE]|[WV]}{I|L}T[VG]{I|L}{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}RTAVV{M(Oxidation (M))|F}Q{I|L};{[QN]|[E{I|L}]|[KN]}RT[VG]{I|L}{M(Oxidation (M))|F}[AG]{I|L} 4.7404;4.4842;4.2279;3.9565;3.7003;3.7003;3.444;3.1877;2.9808;2.9201 -;-;+;-;-;-;-;-;-;- + 480 1 1.499 86981.9 0.5 3644 5697 9338 SUDHL4_400M_050219_2,9343 SUDHL4_400M_050219_2,9343,RELEKLFQL True True RELEKLFQL 52.633801 588.342639148235 701411.9375 9338.0 ENST00000519287.1_1_5:159849240-159855685:+|nuORF;;ENSG00000164611|ENST00000352433|PTTG1;;nc|ENSG00000213005|Q9NZH4|PTTG3P 4.451160589853923 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9344 52.646 691.0 134000.0 25 0 11638.0 + + 42231 RMLSELPAL 9 125 515.2908016193414 1028.5670503054828 2 515.2908203005791 MULTI CID FTMS 0 0 0 9338 98217.671875 0.9315649410592718 -1 0.0682792663574218 6 Unmodified _VSLFHNLLS_ ENSG00000001497|ENST00000374811|LAS1L;nc|ENSG00000001497|Q9Y4W2-3|LAS1L;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;ENST00000484069.1_1_X:64743438-64749476:-|nuORF 26.88365393820708 0.1891292719743517 6 [PA]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}PA{I|L} 10 -1 + 62.445 0.0 0.0 6.0711 6.0711 86.521 0.0 0.0 0.0 8.051987963624114 16.53212513775344 8.051987963624114 8.051987963624114 0 1.305462187404089 1.5228787452803376 0.3807196863200844 0.0 [PA]{I|L}{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}T{I|L}PA{I|L};{[TV]|[{I|L}S]}V[WM]{I|L}PA{I|L};[VS]{I|L}[WM]{I|L}PA{I|L};[H{I|L}][HQ]T{I|L}PA{I|L};[{I|L}V]S[WM]{I|L}PA{I|L};{NN|[MP]|[D{I|L}]|[EV]}{[WT]|[RM]}T{I|L}PA{I|L};{[TV]|[{I|L}S]}S{NN|[MP]|[D{I|L}]|[EV]}T{I|L}PA{I|L};[VS]T{NN|[MP]|[D{I|L}]|[EV]}T{I|L}PA{I|L};{[TV]|[{I|L}S]}V[TP][MT]PA{I|L};[H{I|L}][HK][DV]PA{I|L} 6.0711;5.2882;5.1043;4.9963;4.8588;4.7359;4.5853;4.4013;4.1003;4.0513 -;-;-;-;-;-;-;-;-;- 723 1 1.499 77480.9 1.0 3645 5697 9338 SUDHL4_400M_050219_2,9344 SUDHL4_400M_050219_2,9344,VSLFHNLLS False False RMLSELPAL 52.645818 515.290820300579 774436.0625 9338.0 ENSG00000001497|ENST00000374811|LAS1L;;nc|ENSG00000001497|Q9Y4W2-3|LAS1L;;nc|ENSG00000001497|Q9Y4W2-2|LAS1L;;ENST00000484069.1_1_X:64743438-64749476:-|nuORF 0.7909258206685384 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9345 52.66 800.0 104960.0 25 0 14130.0 + 9523 FLFGEEPSKL 10 89 583.808269031624 1165.601985130048 2 583.8105956912041 MULTI CID FTMS 0 0 0 9338 85562.453125 1.0 0 0.0 7 Unmodified _FLFGEEPSKL_ ENSG00000176915|ENST00000357997|ANKLE2;nc|ENSG00000176915|Q86XL3-3|ANKLE2 49.52724829834842 0.0829255630816734 6 {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GEEPSK{I|L} 10 0 + 70.072 0.0 0.0 6.0116 6.0116 85.196 0.0 0.0 0.0 43.11675105203926 7.695510786217255 7.695510786217255 6.53212513775344 0 0.7742275032520141 0.0 1.1549471895720984 0.0 + + {M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}GEEPSK{I|L};{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}WEPSK{I|L};[KS]P{I|L}{M(Oxidation (M))|F}EG{M(Oxidation (M))|F}{I|L}E;[PS]K{I|L}{M(Oxidation (M))|F}EG{M(Oxidation (M))|F}{I|L}E;[KS]P{I|L}E{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}E;[PS]K{I|L}E{M(Oxidation (M))|F}G{M(Oxidation (M))|F}{I|L}E;[KS]P{I|L}{M(Oxidation (M))|F}W{M(Oxidation (M))|F}{I|L}E;[PS]K{I|L}{M(Oxidation (M))|F}W{M(Oxidation (M))|F}{I|L}E;[PS]{I|L}K{M(Oxidation (M))|F}EG{M(Oxidation (M))|F}{I|L}E;{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}G{M(Oxidation (M))|F}[HA]SK{I|L} 6.0116;5.4512;5.0455;4.988;4.9393;4.8819;4.4851;4.4276;4.3204;4.293 +;-;-;-;-;-;-;-;-;- + 465 + 1 1.499 67545.3 0.4199999868869781 3646 5697 9338 SUDHL4_400M_050219_2,9345 SUDHL4_400M_050219_2,9345,FLFGEEPSKL True True FLFGEEPSKL 52.659651 583.810595691204 729441.0 9338.0 ENSG00000176915|ENST00000357997|ANKLE2;;nc|ENSG00000176915|Q86XL3-3|ANKLE2 6.28105099995931 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9347 52.667 231.0 419800.0 25 0 52262.0 -1 0 76 914.435250781957 1826.855948630714 2 914.4365112185478 MULTI CID FTMS 0 0 0 9346 293424.21875 0.3850737746984334 2 -0.0697402954101562 1 6 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 108.33 0.0 0.0 5.9296 5.9296 86.744 0.0 0.0 0.0 10.904980919043936 75.36242706838318 10.904980919043936 9.030899869919438 0 0.7742275032520141 1.0 0.4247425010840047 0.7742275032520141 [YQ][EP]EAQQNA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQGGA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQQNA{M(Oxidation (M))|F}Y[AG]V{I|L};[YQ][EP]EA[AG]QNA{M(Oxidation (M))|F}YQV{I|L};[YQ][EP]EAQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};[KT]EY{M(Oxidation (M))|F}ANQQAWDDV{I|L};[KT]EY{M(Oxidation (M))|F}ANQ[AG]AWDDV{I|L};[KT]EY{M(Oxidation (M))|F}AN[AG]QAWDDV{I|L};[KT]EY{M(Oxidation (M))|F}AGGQQAWDDV{I|L};[YQ]{M(Oxidation (M))|F}GQ{[ES]|[DT]|[{I|L}C]}[{M(Oxidation (M))|F}T]A{M(Oxidation (M))|F}YQV{I|L} 5.9296;5.4353;5.4353;5.4353;5.4353;4.9136;4.4193;4.4193;4.4193;4.3442 -;-;-;-;-;-;-;-;-;- 1657 1 1.499 67870.8 1.0 3647 5698 9346 SUDHL4_400M_050219_2,9347 SUDHL4_400M_050219_2,9347, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9348 52.669 136.0 377070.0 25 0 15505.0 -1 0 78 974.4738411133648 0 974.4729492068292 PEAK CID FTMS 0 0 0 9346 271209.4375 0.7718669344295246 -2 0.1483001708984375 2 6 VQDAQ[RN]PEN{I|L} 11 -1 43.92 0.0 0.0 2.2559 0.0 0.0 471.1965092757546 208.07277856998283 679.2692878457375 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.8494850021680094 VQDAQ[RN]PEN{I|L} 2.2559 - 2231 + 1 1.499 40821.9 1.0 3648 5698 9346 SUDHL4_400M_050219_2,9348 SUDHL4_400M_050219_2,9348, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9349 52.673 197.0 315130.0 25 0 45635.0 + 30365 RAINIALQL 9 72 506.3185518215714 1010.6225507099427 2 506.3171874880791 MULTI CID FTMS 0 0 0 9346 209213.90625 0.4530289152145721 -2 0.1483001708984375 3 Unmodified _RAINIALQL_ ENSG00000172336|ENST00000303151|POP7 30.63653989081413 0.1413794767160703 6 [{I|L}A]RN{I|L}A{I|L}Q{I|L} 9 2 + 52.511 0.0 0.0 5.1959 5.1959 78.355 0.0 0.0 0.0 6.942411707047832 14.973024840566469 6.942411707047832 2.218487496163561 0 0.3807196863200844 0.8860566476931632 0.0 0.0 [{I|L}A]RN{I|L}A{I|L}Q{I|L};[{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[Q{I|L}]{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[{I|L}A]RGG{I|L}A{I|L}Q{I|L};[{I|L}A]RN{I|L}A{I|L}[AG]{I|L};[{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};[Q{I|L}]{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};[{I|L}A]RGG{I|L}A{I|L}[AG]{I|L} 5.1959;4.9764;4.5089;4.2847;4.2847;4.0695;3.5978;3.3779 -;-;-;-;-;-;-;- 359 1 1.499 50555.7 1.0 3649 5698 9346 SUDHL4_400M_050219_2,9349 SUDHL4_400M_050219_2,9349,RAINIALQL False True RAINIALQL 52.673115 506.317187488079 4410572.0 9346.0 ENSG00000172336|ENST00000303151|POP7 5.065264066060384 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9350 52.683 575.0 143170.0 25 0 19120.0 + 14953 ILMKEQLML 9 102 559.8196395797366 1117.6247262262732 2 559.8189575076103 MULTI CID FTMS 0 0 0 9346 127222.7265625 1.0 0 0.0 4 Unmodified _ILMKEQLML_ ENST00000478691.5_1_1:23664326-23665089:-|nuORF;ENST00000490652.1_1_1:23664981-23665089:-|nuORF 51.629811660486645 0.0367964933207742 6 {[QN]|[E{I|L}]|[KN]}QKM{I|L}{I|L}M{I|L} 9 4 + 87.049 0.0 0.0 7.7888 7.7888 92.628 0.0 0.0 0.0 12.21848749616356 16.478174818886373 12.21848749616356 9.208187539523747 0 0.4247425010840047 1.3979400086720375 1.075257498915995 1.1237125054200234 {[QN]|[E{I|L}]|[KN]}QKM{I|L}{I|L}M{I|L};{[QN]|[E{I|L}]|[KN]}[AG]KM{I|L}{I|L}M{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}KM{I|L}{I|L}M{I|L};[VP]{[CA]|SS}KM{I|L}{I|L}M{I|L};{[QN]|[E{I|L}]|[KN]}QKM{I|L}M{I|L}{I|L};[Q{I|L}]EKM{I|L}{I|L}M{I|L};{[QN]|[E{I|L}]|[KN]}QKMM{I|L}{I|L}{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}K{I|L}M{I|L}{I|L}M{I|L};{[QN]|[E{I|L}]|[KN]}[AG]KM{I|L}M{I|L}{I|L};[{I|L}T][NG]{I|L}M{I|L}{I|L}M{I|L} 7.7888;6.9649;6.6955;6.5929;6.5573;6.5069;6.288;5.7768;5.7334;5.5133 -;-;-;-;-;-;-;-;-;- 680 1 1.499 67171.4 1.0 3650 5698 9346 SUDHL4_400M_050219_2,9350 SUDHL4_400M_050219_2,9350,ILMKEQLML True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9351 52.696 714.0 115250.0 25 0 18470.0 + 14693 IITKDLFQV 9 111 538.822262411928 1075.629971890656 2 538.8229247927666 MULTI CID FTMS 0 0 0 9346 93634.078125 1.0 0 0.0 5 Unmodified _IITKDLFQV_ ENSG00000197102|ENST00000360184|DYNC1H1;ENST00000556139.1_1_14:102505853-102505889:+|nuORF 32.037481411007896 0.1235546156350648 6 {I|L}{I|L}MP[QT]K{M(Oxidation (M))|F}V 9 6 + 43.355 0.0 0.0 4.0307 4.0307 72.483 0.0 0.0 0.0 12.676514697633865 5.31478917042255 5.31478917042255 0.9691001300805624 0 0.4247425010840047 2.0 0.0 0.8807196863200843 {I|L}{I|L}MP[QT]K{M(Oxidation (M))|F}V;{I|L}{I|L}MP[KQ]T{M(Oxidation (M))|F}V;{I|L}{I|L}MP[QT]KV{M(Oxidation (M))|F};{I|L}{I|L}MP[KQ]TV{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[SG]{I|L}{I|L}{I|L}{M(Oxidation (M))|F}QV;{I|L}{I|L}{[WS]|[C(Carbamidomethyl (C)){I|L}]}[PS]K{M(Oxidation (M))|F}V;{I|L}{I|L}MP[KQ][Y{I|L}]A;{I|L}{I|L}MP[KQ][{I|L}A]Y;{I|L}{I|L}MAA[PS]K{M(Oxidation (M))|F}V;{NN|[MP]|[D{I|L}]|[EV]}[KT]{I|L}{I|L}{M(Oxidation (M))|F}QV 4.0307;3.9406;3.5366;3.4465;2.6158;2.5461;2.5428;2.4772;2.4299;2.3377 -;-;-;-;-;-;-;-;-;- 1132 + 1 1.499 66908.2 1.0 3651 5698 9346 SUDHL4_400M_050219_2,9351 SUDHL4_400M_050219_2,9351,IITKDLFQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9353 52.703 169.0 412560.0 25 0 70079.0 + 37899 TLWPEVQKL 9 83 557.3188691838084 1112.6231854344169 2 557.3190185427666 MULTI CID FTMS 0 0 0 9352 367038.3125 0.641379000022826 -6 0.25140380859375 1 Unmodified _TLWPEVQKL_ ENSG00000134759|ENST00000358232|ELP2;ENST00000541294.1_1_18:33739943-33744659:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 32.78568957990786 0.1150597335874693 6 [{I|L}T]WPEVQK{I|L} 9 0 + 65.532 0.0 0.0 5.8899 5.8899 87.991 0.0 0.0 0.0 40.12578788640525 9.341605587590536 9.341605587590536 9.208187539523747 0 0.4247425010840047 1.6989700043360187 0.0 0.7742275032520141 + + [{I|L}T]WPEVQK{I|L};[{I|L}T]WPEV[AG]K{I|L};{[QN]|[E{I|L}]|[KN]}K[WR]W[VP];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{I|L}{I|L}EPW[VP];{[QV]|[N{I|L}]|[RA]|[KV]}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P[VS][VP];{[QV]|[N{I|L}]|[RA]|[KV]}K{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}P{[DA]|[EG]}[VP] 5.8899;5.0622;2.7052;1.2544;0.52922;0.52922 +;-;-;-;-;- + 266 + 1 1.499 56754.0 1.0 3652 5699 9352 SUDHL4_400M_050219_2,9353 SUDHL4_400M_050219_2,9353,TLWPEVQKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9354 52.71 376.0 147980.0 25 0 12184.0 -1 0 71 981.9694202970288 1961.924287660857 2 982.4719116091728 MULTI CID FTMS 0 0 0 9352 185552.9375 0.9308297352877272 -1 0.03594970703125 2 6 QAENN{I|L}P{[QD]|[EN]|[WG]|[KD]|[RS]} 9 -1 55.724 0.0 0.0 2.8402 0.0 0.0 934.4833241193376 0.0 934.4833241193376 0.0 43.02046884880937 0.0 0.0 0 0.8807196863200843 0.0 0.0 0.3807196863200844 QAENN{I|L}P{[QD]|[EN]|[WG]|[KD]|[RS]} 2.8402 - 266 1 1.499 43686.9 1.0 3653 5699 9352 SUDHL4_400M_050219_2,9354 SUDHL4_400M_050219_2,9354, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9355 52.716 327.0 191430.0 25 0 16875.0 -1 PALRNCSPL 9 101 514.2700687451232 1026.5255845570464 2 514.7728759646416 MULTI CID FTMS 0 0 0 9352 129176.078125 0.6716658526019685 -3 0.1842498779296875 3 Carbamidomethyl (C) _PALRNC(Carbamidomethyl (C))SPL_ ENST00000301031.8_1_16:89736477-89736777:+|nuORF 19.438996006549623 0.310492472477042 6 [WK]S{M(Oxidation (M))|F}YPS{I|L} 8 -1 + 31.768 0.0 0.0 3.0947 3.0947 80.378 0.0 0.0 0.0 -1.3876585716293557 5.591517729002202 -1.3876585716293557 9.52114293069888 0 0.0 0.0 0.91944517631652 0.0 [WK]S{M(Oxidation (M))|F}YPS{I|L};E[PA]{I|L}[WM]PA{I|L};[WK]S{M(Oxidation (M))|F}YT[VP];E[PA]{I|L}[WM]{I|L}[PA];[WK]SGD[PG]PA{I|L};[WK]SYYPA{I|L};[H{I|L}]{NN|[MP]|[D{I|L}]|[EV]}{[ES]|[DT]|[{I|L}C]}[WK];[{I|L}T]TY{[ES]|[DT]|[{I|L}C]}[WK];{[QN]|[E{I|L}]|[KN]}[HV]{[ES]|[DT]|[{I|L}C]}[WK] 3.0947;2.1672;1.4751;1.0307;0.97737;0.85566;0.69292;0.15733;0.13373 -;-;-;-;-;-;-;-;- 735 + 1 1.499 57984.5 1.0 3654 5699 9352 SUDHL4_400M_050219_2,9355 SUDHL4_400M_050219_2,9355,PALRNCSPL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9356 52.729 800.0 26276.0 25 0 2414.4 -1 0 44 1193.548592172261 3577.623947116982 3 1194.550952136517 MULTI CID FTMS 0 0 0 9352 83132.3984375 0.357463595539332 -8 0.2894287109375 4 6 PP 2 -1 10.969 0.0 0.0 0.3066 0.0 0.0 2929.3003446541384 451.19355188541255 3380.493896539551 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PP 0.3066 - 42 + 1 1.499 21957.1 0.3600000143051147 3655 5699 9352 SUDHL4_400M_050219_2,9356 SUDHL4_400M_050219_2,9356, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9358 52.734 69.0 419040.0 25 0 48323.0 + 9430 FLADPSAFVAA 11 49 554.7873279413354 1107.5601029494708 2 554.7875244021416 MULTI CID FTMS 0 0 0 9357 661156.6875 0.8078070372977745 3 -0.1092796325683593 1 Unmodified _FLADPSAFVAA_ ENSG00000089157|ENST00000392514|RPLP0;ENST00000496593.5_1_11:61404148-61405105:+|nuORF;nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6 24.020572477871973 0.5281922720044371 6 {M(Oxidation (M))|F}W{I|L}{M(Oxidation (M))|F}Q{I|L} 6 9 25.52 0.0 0.0 2.3042 0.0 0.0 255.12275893379064 0.0 255.12275893379064 0.0 11.96485474348776 0.0 0.0 0 0.0994850021680094 0.0 0.0 0.0 {M(Oxidation (M))|F}W{I|L}{M(Oxidation (M))|F}Q{I|L} 2.3042 - 65 1 1.499 30513.3 1.0 3656 5700 9357 SUDHL4_400M_050219_2,9358 SUDHL4_400M_050219_2,9358,FLADPSAFVAA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9359 52.74 314.0 199350.0 25 0 16699.0 + 29595 QLVDIIEKV 9 106 528.8188521309435 1055.6231513286868 2 528.8196899294853 MULTI CID FTMS 0 0 0 9357 131402.78125 0.198296397984067 3 -0.1092796325683593 2 Unmodified _QLVDIIEKV_ ENSG00000131467|ENST00000590720|PSME3;ENST00000593111.1_1_17:40986588-40991030:+|nuORF;nc|ENSG00000131467|P61289-2|PSME3;nc|ENSG00000131467|P61289-3|PSME3 38.61474834105838 0.0830609365873449 6 [Q{I|L}]VD{I|L}{I|L}EVK 9 2 + 61.155 0.0 0.0 5.7932 5.7932 89.774 0.0 0.0 0.0 25.755981871547178 9.665762445130497 9.665762445130497 13.309932190414235 0 0.6307196863200843 1.5228787452803376 0.4247425010840047 0.0 [Q{I|L}]VD{I|L}{I|L}EVK;[Q{I|L}]VD{I|L}{I|L}[VS]G{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}E[KQ]{I|L}VV;{NN|[MP]|[D{I|L}]|[EV]}K{[HG]|PP}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{[HG]|PP}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}[W{I|L}][KA]VV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[RH]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;{[TV]|[{I|L}S]}G[RH]{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}V;[AG][WR][KQ]{I|L}VV;[VP]HH[KQ]{I|L}VV 5.7932;4.5324;1.8193;1.5618;1.1195;0.89855;0.79102;0.41818;0.25023;0.10349 -;-;-;-;-;-;-;-;-;- 435 + 1 1.499 54002.1 1.0 3657 5700 9357 SUDHL4_400M_050219_2,9359 SUDHL4_400M_050219_2,9359,QLVDIIEKV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9360 52.745 272.0 229620.0 25 0 17452.0 + 29617 QLYNQIIKL 9 97 566.8397713422586 1131.664989751317 2 566.8403808474541 MULTI CID FTMS 0 0 0 9357 171860.46875 1.0 0 0.0 3 Unmodified _QLYNQIIKL_ ENSG00000174780|ENST00000642900|SRP72 53.40400417844725 0.0329064971918313 6 [Q{I|L}]YNQ{I|L}{I|L}K{I|L} 9 0 + 47.255 0.0 0.0 4.1757 4.1757 76.391 0.0 0.0 0.0 10.21652514092061 3.187587626244124 3.187587626244124 3.187587626244124 0 1.1382104921644451 1.3979400086720375 0.0 0.3054621874040891 + + [Q{I|L}]YNQ{I|L}{I|L}K{I|L};[Q{I|L}]YNQ{I|L}{I|L}{I|L}K;[Q{I|L}]YGGQ{I|L}{I|L}K{I|L};[Q{I|L}]YN[AG]{I|L}{I|L}K{I|L};[Q{I|L}]NY{I|L}Q{I|L}K{I|L};[Q{I|L}]YGGQ{I|L}{I|L}{I|L}K;[Q{I|L}]YN[AG]{I|L}{I|L}{I|L}K;[Q{I|L}]NY{I|L}AAVK{I|L};[Q{I|L}]YGG[AG]{I|L}{I|L}K{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}{I|L}Q{I|L}K{I|L} 4.1757;3.8941;3.3621;3.3621;3.273;3.0804;3.0804;3.0758;2.5522;2.5223 +;-;-;-;-;-;-;-;-;- + 609 + 1 1.499 51995.7 1.0 3658 5700 9357 SUDHL4_400M_050219_2,9360 SUDHL4_400M_050219_2,9360,QLYNQIIKL True True QLYNQIIKL 52.744942 566.840380847454 917052.75 9357.0 ENSG00000174780|ENST00000642900|SRP72 4.383833408355713 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9361 52.759 800.0 154560.0 25 0 11535.0 7224 EERAIQRAECR 11 126 680.8408039882146 1359.667055043229 2 680.8413574099541 MULTI CID FTMS 0 0 0 9357 125618.34375 0.0916411083854415 -5 0.2508201599121094 4 Unmodified _EERAIQRAECR_ ENSG00000163617|ENST00000295878|CCDC191 23.78978130925829 0.5336113198261219 6 [AG]TGQA{I|L}ET{[QG]|[NA]}QVT 14 11 + 73.913 0.0 0.0 5.4361 5.4361 78.325 0.0 0.0 0.0 2.0078197732981806 9.119091408858054 2.0078197732981806 1.708187539523749 0 1.1791746928241125 1.6989700043360187 1.0283773187068794 0.4247425010840047 [AG]TGQA{I|L}ET{[QG]|[NA]}QVT;[AG]GTQA{I|L}ET{[QG]|[NA]}QVT;{NN|[MP]|[D{I|L}]|[EV]}WA{I|L}ET{[QG]|[NA]}QVT;[QT]GQA{I|L}ET{[QG]|[NA]}QVT;[AG]GQTA{I|L}ET{[QG]|[NA]}QVT;[AG]QGTA{I|L}ET{[QG]|[NA]}QVT;[{I|L}A]WD{I|L}ET{[QG]|[NA]}QVT;[AG]TGQA{I|L}ET{[QG]|[NA]}[AG]VT;[AG]GTQA{I|L}ET{[QG]|[NA]}[AG]VT;[QT]G[AG]A{I|L}ET{[QG]|[NA]}QVT 5.4361;5.3105;5.2884;5.2876;5.2638;5.1958;4.7716;4.7705;4.6448;4.6203 -;-;-;-;-;-;-;-;-;- 18765 1 1.499 92414.7 0.4900000095367431 3659 5700 9357 SUDHL4_400M_050219_2,9361 SUDHL4_400M_050219_2,9361,EERAIQRAECR False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9362 52.773 800.0 114150.0 25 0 13662.0 + 20826 LLYDLADQLHA 11 91 636.3350441038419 1270.6555352744838 2 636.3361694216728 MULTI CID FTMS 0 0 0 9357 100682.578125 0.7832653807674517 -1 0.0337905883789062 5 Unmodified _LLYDLADQLHA_ ENSG00000140374|ENST00000557943|ETFA;ENST00000559075.5_1_15:76523658-76603729:-|nuORF;ENST00000559758.5_1_15:76566725-76584849:-|nuORF;nc|ENSG00000140374|P13804-2|ETFA 59.17704102725264 0.0724851133754991 6 {I|L}{I|L}YD{I|L}ADQ{I|L}[HA] 11 0 + 111.18 0.0 0.0 8.7496 8.7496 96.682 0.0 0.0 0.0 76.56351087989518 4.981979378655879 4.981979378655879 16.870773275331146 0 0.9247425010840048 2.0 1.1237125054200234 0.7742275032520141 + + {I|L}{I|L}YD{I|L}ADQ{I|L}[HA];{I|L}{I|L}YD{I|L}AD[AG]{I|L}[HA];{I|L}{I|L}YD{I|L}[YV]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{I|L}{I|L}YD[YV]{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{I|L}{I|L}YD{I|L}A[PA]{[MG]|[TS]}[HA];{I|L}{I|L}[EP][WQ]{I|L}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{I|L}{I|L}[EP]{I|L}[WQ]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{I|L}{I|L}[EP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{I|L}{I|L}Y{M(Oxidation (M))|F}VAA[KS]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{I|L}{I|L}Y{[CT]|[{M(Oxidation (M))|F}G]}[KS]A{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 8.7496;7.4219;6.6622;5.9937;5.8077;5.1484;4.7549;4.66;4.4432;4.3226 +;-;-;-;-;-;-;-;-;- + 1468 + 1 1.499 78626.1 0.449999988079071 3660 5700 9357 SUDHL4_400M_050219_2,9362 SUDHL4_400M_050219_2,9362,LLYDLADQLHA True True LLYDLADQLHA 52.772627 636.336169421673 641683.0 9357.0 ENST00000559758.5_1_15:76566725-76584849:-|nuORF;;ENSG00000140374|ENST00000557943|ETFA;;nc|ENSG00000140374|P13804-2|ETFA;;ENST00000559075.5_1_15:76523658-76603729:-|nuORF 9.305482864379885 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9363 52.786 800.0 154570.0 25 0 8988.4 + -1 YQVPSPVL 8 98 902.909309786676 1803.804066640152 2 903.412158191204 MULTI CID FTMS 0 0 0 9357 83905.640625 0.328429203451871 -4 0.2180404663085937 6 ENST00000217233.7_1_20:377427-377601:+|nuORF 6 [KT]EY{M(Oxidation (M))|F}WQQAECC(Carbamidomethyl (C))V{I|L} 14 -1 + 96.668 0.0 0.0 5.3591 5.3591 58.594 0.0 0.0 0.0 73.36687353565289 8.494850021680094 8.494850021680094 0.0 0 0.3054621874040891 0.0 0.3494850021680094 0.8494850021680094 [KT]EY{M(Oxidation (M))|F}WQQAECC(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}WQQAECVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}WQQAEC[CG]V{I|L};[KT]EY{M(Oxidation (M))|F}WQQAECV[CG]{I|L};[KT]EY{M(Oxidation (M))|F}W[AG]QAECC(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}WQ[AG]AECC(Carbamidomethyl (C))V{I|L};[KT]EY{M(Oxidation (M))|F}WQ[AG]AECVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}W[AG]QAECVC(Carbamidomethyl (C)){I|L};[KT]EY{M(Oxidation (M))|F}WQ[AG]AEC[CG]V{I|L};[KT]EY{M(Oxidation (M))|F}W[AG]QAECV[CG]{I|L} 5.3591;5.3591;4.8574;4.8574;4.8574;4.8574;4.8574;4.8574;4.3567;4.3567 -;-;-;-;-;-;-;-;-;- 2582 + 1 1.499 86883.6 0.3899999856948852 3661 5700 9357 SUDHL4_400M_050219_2,9363 SUDHL4_400M_050219_2,9363, False False YQVPSPVL 52.786477 902.9112 221443.203125 9357.0 ENST00000217233.7_1_20:377427-377601:+|nuORF -0.2590205669403076 1.0 False 8.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9365 52.792 53.0 997150.0 25 0 133200.0 + 22967 LSFPSGLAVV 10 63 495.2870428723804 988.5595328115608 2 495.2870666384697 MULTI CID FTMS 0 0 0 9364 954609.0 0.981447983252518 -1 0.0570831298828125 1 Unmodified _LSFPSGLAVV_ REV__ENSG00000169495|ENST00000302495|HTRA4 24.020572477871973 0.4289996903560794 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}P 7 -1 55.322 0.0 0.0 5.5962 0.0 0.0 0.0 182.0935152643188 182.0935152643188 42.84781332942629 0.0 0.0 0.0 0 0.7742275032520141 2.0 0.0 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}V{M(Oxidation (M))|F}{I|L}P 5.5962 - 136 + 1 1.499 45936.2 1.0 3662 5701 9364 SUDHL4_400M_050219_2,9365 SUDHL4_400M_050219_2,9365,LSFPSGLAVV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9366 52.806 800.0 112240.0 25 0 24607.0 + 24171 LYTLSTLLSKL 11 61 626.3796021825198 1250.7446514318394 2 626.3798095583916 MULTI CID FTMS 0 0 0 9364 77045.1015625 0.3051613874264302 4 -0.1381645202636718 2 Unmodified _LYTLSTLLSKL_ REV__ENST00000355315.7_2_8:57130481-57130601:+|nuORF 2.9952420565917617 0.861016188266951 6 {I|L} 1 -1 9.8329 0.0 0.0 0.78616 0.0 0.0 1119.6497092705097 0.0 1119.6497092705097 0.0 5.8534811358448735 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.78616 + + 4 + 1 1.499 71859.4 0.4799999892711639 3663 5701 9364 SUDHL4_400M_050219_2,9366 SUDHL4_400M_050219_2,9366,LYTLSTLLSKL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9367 52.809 187.0 221450.0 25 0 30968.0 44400 YLYCTFISL 9 59 561.7786468805937 1121.5427408279872 2 561.7791625857353 MULTI CID FTMS 0 0 0 9364 218498.421875 0.4492063278929206 -4 0.2068443298339843 3 Unmodified _YLYCTFISL_ ENSG00000280314|ENST00000641662|OR8K3 16.942295170755138 0.3780752226737986 6 S{I|L} 2 7 26.766 0.0 0.0 2.3865 0.0 0.0 903.4158620211498 0.0 903.4158620211498 0.0 9.573259432077563 0.0 0.0 0 0.5 0.0 0.3807196863200844 0.0 + S{I|L} 2.3865 + + 36 + 1 1.499 39462.2 1.0 3664 5701 9364 SUDHL4_400M_050219_2,9367 SUDHL4_400M_050219_2,9367,YLYCTFISL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9368 52.815 309.0 284410.0 25 0 38637.0 + 17315 KLTDIQIEL 9 107 536.8161970874409 1071.6178412416816 2 536.8163940310478 MULTI CID FTMS 0 0 0 9364 189126.5 0.3521973928521256 -3 0.1268234252929687 4 Unmodified _KLTDIQIEL_ ENSG00000176049|ENST00000616793|JAKMIP2;ENSG00000188385|ENST00000684848|JAKMIP3;nc|ENSG00000176049|Q96AA8-2|JAKMIP2;nc|ENSG00000176049|Q96AA8|JAKMIP2;nc|ENSG00000188385|Q5VZ66|JAKMIP3 79.59630418116434 0.0176145593575188 6 {[QN]|[E{I|L}]|[KN]}SK{I|L}Q{I|L}E{I|L} 9 3 + 102.86 0.0 0.0 9.5984 9.5984 94.327 0.0 0.0 0.0 16.09087582150201 16.478174818886373 16.09087582150201 9.208187539523747 0 0.6989700043360187 1.3010299956639813 1.7491348669726232 0.7742275032520141 {[QN]|[E{I|L}]|[KN]}SK{I|L}Q{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}SK{I|L}[AG]{I|L}E{I|L};{[TV]|[{I|L}S]}EK{I|L}Q{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}TK{I|L}Q{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}SQ{I|L}K{I|L}E{I|L};[{I|L}T]DK{I|L}Q{I|L}E{I|L};[{I|L}T]KD{I|L}Q{I|L}E{I|L};[K{I|L}]TD{I|L}Q{I|L}E{I|L};{[TV]|[{I|L}S]}EK{I|L}[AG]{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}NT{I|L}K{I|L}E{I|L} 9.5984;8.7391;8.0969;7.9347;7.9099;7.859;7.4126;7.2384;7.2376;7.1213 -;-;-;-;-;-;-;+;-;- + 1521 1 1.499 70497.0 1.0 3665 5701 9364 SUDHL4_400M_050219_2,9368 SUDHL4_400M_050219_2,9368,KLTDIQIEL True True KLTDIQIEL 52.814802 536.816394031048 2799816.75 9364.0 nc|ENSG00000188385|Q5VZ66|JAKMIP3;;nc|ENSG00000176049|Q96AA8|JAKMIP2;;ENSG00000176049|ENST00000616793|JAKMIP2;;ENSG00000188385|ENST00000684848|JAKMIP3;;nc|ENSG00000176049|Q96AA8-2|JAKMIP2 3.023748079935709 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9370 52.824 358.0 201270.0 25 0 26066.0 + 29282 QIESLHAETH 10 111 582.7858405072192 0 582.7859374880791 PEAK CID FTMS 0 0 0 9369 169018.65625 0.8237177415049968 -1 0.0283317565917968 1 Unmodified _QIESLHAETH_ REV__ENSG00000170959|ENST00000684477|DCDC1;REV__nc|ENSG00000170959|M0R2J8|DCDC1 11.494710602746466 0.3634749886926736 6 {I|L}{I|L}{I|L}D 4 -1 27.515 0.0 0.0 2.3647 0.0 0.0 452.1792532648063 254.07923303775627 706.2584863025626 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.5994850021680094 0.0 {I|L}{I|L}{I|L}D 2.3647 - 80 + 1 1.499 57465.8 1.0 3666 5702 9369 SUDHL4_400M_050219_2,9370 SUDHL4_400M_050219_2,9370,QIESLHAETH False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9371 52.837 737.0 133570.0 25 0 15997.0 + + 20460 RAAPPLLTL 9 111 476.3030759096212 950.5915988860424 2 476.3029357790947 MULTI CID FTMS 0 0 0 9369 94495.1171875 1.0 0 0.0 2 Unmodified _LLKQHVTL_ ENST00000262518.8_1_16:30710550-30715400:+|nuORF;ENST00000411466.6_3_16:30709553-30715400:+|nuORF 24.67388899826682 0.525179942228231 6 P[{I|L}P]{I|L}T{I|L} 6 -1 33.416 0.0 0.0 3.5153 0.0 0.0 298.1751881330094 0.0 298.1751881330094 0.0 6.125306894009192 0.0 0.0 0 0.5 0.0 0.0 0.0 P[{I|L}P]{I|L}T{I|L} 3.5153 - 210 1 1.499 79765.6 1.0 3667 5702 9369 SUDHL4_400M_050219_2,9371 SUDHL4_400M_050219_2,9371,LLKQHVTL False False RAAPPLLTL 52.83659 476.302935779095 613901.9375 9369.0 ENST00000262518.8_1_16:30710550-30715400:+|nuORF;;ENST00000411466.6_3_16:30709553-30715400:+|nuORF 3.2423126697540283 2.0 False 9.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9372 52.839 95.0 436940.0 25 0 55978.0 + 17419 KMWEEAISL 9 67 553.7809333930862 1105.5473138529724 2 553.7811767458916 MULTI CID FTMS 0 0 0 9369 376513.03125 0.725656520856392 -1 0.0283317565917968 3 Unmodified _KMWEEAISL_ ENSG00000134516|ENST00000520908|DOCK2;ENST00000523351.5_1_5:169188379-169509859:+|nuORF 30.63653989081413 0.1413794767160703 6 DA{I|L}{[TV]|[{I|L}S]} 5 5 30.758 0.0 0.0 2.7821 0.0 0.0 588.2587757794937 0.0 588.2587757794937 0.0 15.273109370204452 0.0 0.0 0 0.5 0.0 0.805462187404089 0.0 DA{I|L}{[TV]|[{I|L}S]} 2.7821 - 45 1 1.499 34094.1 1.0 3668 5702 9369 SUDHL4_400M_050219_2,9372 SUDHL4_400M_050219_2,9372,KMWEEAISL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9374 52.854 677.0 128420.0 25 0 16886.0 + 2912 AVFPHLTVV 9 106 491.7903207830433 981.5660886328866 2 491.7897521853447 MULTI CID FTMS 0 0 0 9373 89017.0390625 0.6227443910444723 1 -0.0547370910644531 1 Unmodified _AVFPHLTVV_ ENSG00000134825|ENST00000537328|TMEM258 44.40701690623563 0.0526327925666318 6 [H{I|L}]PT{M(Oxidation (M))|F}VAVV 9 7 + 53.923 0.0 0.0 5.4936 5.4936 79.119 0.0 0.0 0.0 13.477591458552569 -2.8915947561237942 -2.8915947561237942 1.989700043360188 0 0.0 1.154901959985743 1.7302046884880935 0.0 [H{I|L}]PT{M(Oxidation (M))|F}VAVV;[H{I|L}]P{M(Oxidation (M))|F}TVAVV;[H{I|L}]TP{M(Oxidation (M))|F}VAVV;[H{I|L}]PTV{M(Oxidation (M))|F}AVV;[H{I|L}]TPV{M(Oxidation (M))|F}AVV;[H{I|L}]M{I|L}TVAVV;[H{I|L}]TVP{M(Oxidation (M))|F}AVV;{[VA]|[{I|L}G]}[YV]YV[R{I|L}];{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L}V[HV]VV;[H{I|L}]TVV{[ES]|[DT]|[{I|L}C]}VV 5.4936;5.2909;5.2116;5.1648;4.8828;4.8048;4.3707;3.3282;2.9083;2.5286 -;-;-;-;-;-;-;-;-;- 672 1 1.499 67670.6 1.0 3669 5703 9373 SUDHL4_400M_050219_2,9374 SUDHL4_400M_050219_2,9374,AVFPHLTVV True True AVFPHLTVV 52.854304 491.789752185345 752980.125 9373.0 ENSG00000134825|ENST00000537328|TMEM258 4.621676445007324 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9375 52.866 655.0 193780.0 25 0 41538.0 + 14920 ILMDERTFL 9 79 569.3023801336873 1136.5902073341745 2 569.3023559451103 MULTI CID FTMS 0 0 0 9373 113779.328125 0.4013167843853059 -4 0.1430702209472656 2 Unmodified _ILMDERTFL_ ENSG00000115464|ENST00000398571|USP34;ENST00000463046.5_1_2:61417336-61434009:-|nuORF;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34 29.84058131909904 0.1515068451768857 6 {I|L}{I|L}MDE 5 4 60.745 0.0 0.0 5.3445 0.0 0.0 0.0 532.2890719049436 532.2890719049436 46.76599703664159 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.3494850021680094 0.0 + {I|L}{I|L}MDE 5.3445 + + 73 + 1 1.499 98147.0 1.0 3670 5703 9373 SUDHL4_400M_050219_2,9375 SUDHL4_400M_050219_2,9375,ILMDERTFL False True ILMDERTFL 52.865727 569.30235594511 3085033.75 9373.0 nc|ENSG00000115464|Q70CQ2-3|USP34;;ENSG00000115464|ENST00000398571|USP34;;nc|ENSG00000115464|Q70CQ2-2|USP34;;ENST00000463046.5_1_2:61417336-61434009:-|nuORF 4.017722845077515 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9376 52.88 800.0 51374.0 25 0 2730.5 -1 0 76 881.9067372048643 1761.7989214765284 2 881.9113036990166 MULTI CID FTMS 0 0 0 9373 108075.953125 0.0692026189350494 64 -1.7125892639160156 3 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQ{[QG]|[NA]}{M(Oxidation (M))|F} 11 -1 34.161 0.0 0.0 1.939 0.0 0.0 0.0 519.260153305792 519.260153305792 12.6019098470059 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.7742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQ{[QG]|[NA]}{M(Oxidation (M))|F} 1.939 - 942 1 1.499 33090.7 0.4399999976158142 3671 5703 9373 SUDHL4_400M_050219_2,9376 SUDHL4_400M_050219_2,9376, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9377 52.893 800.0 356750.0 25 0 22022.0 + 28517 PTLQEVILANL 11 141 605.855554337379 1209.696555741558 2 605.8555175662041 MULTI CID FTMS 0 0 0 9373 90296.234375 0.0020921242757658 -10 0.3944740295410156 4 Unmodified _PTLQEVILANL_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 59.36838082759317 0.0717085717264091 6 [TP]AAVD{I|L}{I|L}{I|L}V[QA] 12 8 + 70.166 0.0 0.0 5.8003 5.8003 79.409 0.0 0.0 0.0 10.114393726401689 1.566818653688529 1.566818653688529 1.708187539523749 0 0.6307196863200843 1.2218487496163564 2.16195437047216 0.0 [TP]AAVD{I|L}{I|L}{I|L}V[QA];[TP]AAV{I|L}D{I|L}{I|L}V[QA];[TP]AAVEV{I|L}{I|L}V[QA];[TP]AAV{I|L}{I|L}EVV[QA];[TP]AAV{I|L}E{I|L}VV[QA];[TP]AAV{I|L}{I|L}D{I|L}V[QA];[TP]AAVE{I|L}{I|L}VV[QA];[TP]AAV{I|L}EV{I|L}V[QA];[TP]AAVE{I|L}V{I|L}V[QA];{I|L}{I|L}DV{I|L}[TP]AAV[QA] 5.8003;5.6591;5.6263;5.2082;5.1152;5.0955;5.0825;5.0025;4.9697;4.9642 -;-;-;-;-;-;-;-;-;- 15828 1 1.499 205413.4 0.4099999964237213 3672 5703 9373 SUDHL4_400M_050219_2,9377 SUDHL4_400M_050219_2,9377,PTLQEVILANL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9379 52.9 185.0 259810.0 25 0 12080.0 -1 0 51 966.9629772845273 1931.9114016358544 2 966.9650756716728 MULTI CID FTMS 0 0 0 9378 252846.28125 0.3185513119568421 4 -0.1224555969238281 1 6 [NP]{I|L}NMT[HT][PG]DYQSN 15 -1 56.621 0.0 0.0 2.9308 0.0 0.0 0.0 259.0841838975443 259.0841838975443 27.184334470932043 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.3807196863200844 0.0 [NP]{I|L}NMT[HT][PG]DYQSN 2.9308 - 617 1 1.499 37076.4 1.0 3673 5704 9378 SUDHL4_400M_050219_2,9379 SUDHL4_400M_050219_2,9379, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9380 52.909 509.0 169150.0 25 0 9232.5 -1 0 96 888.9119268290855 1775.8093007249709 2 888.9132568240166 MULTI CID FTMS 0 0 0 9378 165077.0625 0.5803975229474122 -3 0.10693359375 2 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQEA{M(Oxidation (M))|F}YQ[{I|L}V] 15 -1 + 95.772 0.0 0.0 5.3931 5.3931 58.739 0.0 0.0 0.0 6.225626822202528 70.71001883029645 6.225626822202528 0.0 0 0.3494850021680094 1.6989700043360187 0.3807196863200844 1.8169015600442573 {[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQEA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQEA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]EA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQ[AG]EA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QEA{M(Oxidation (M))|F}YQ[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]A[AG]QEA{M(Oxidation (M))|F}YK[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}Y[CS]AQQEA{M(Oxidation (M))|F}Y[AG][{I|L}V];[YQ]V[CS]AQQEA{M(Oxidation (M))|F}YQ[{I|L}V];[YQ]V[CS]AQQEA{M(Oxidation (M))|F}YK[{I|L}V];[QA]HDEAQQEA{M(Oxidation (M))|F}YQ[{I|L}V] 5.3931;5.3931;4.8846;4.8846;4.8846;4.8846;4.8846;4.8677;4.8677;4.7966 -;-;-;-;-;-;-;-;-;- 2059 1 1.499 63070.1 1.0 3674 5704 9378 SUDHL4_400M_050219_2,9380 SUDHL4_400M_050219_2,9380, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9381 52.912 183.0 512450.0 25 0 48745.0 + 44412 YLYPDITRL 9 79 577.3183938521897 1152.6222347711794 2 577.3200561404228 MULTI CID FTMS 0 0 0 9378 152343.375 0.3093666161440653 -4 0.1640167236328125 3 Unmodified _YLYPDITRL_ ENSG00000131389|ENST00000622186|SLC6A6 20.41453444215458 0.284085796332423 6 [Y{I|L}]YPD{I|L} 6 3 52.664 0.0 0.0 4.569 0.0 0.0 0.0 385.2193087213501 385.2193087213501 34.61635608164464 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [Y{I|L}]YPD{I|L} 4.569 + + 107 + 1 1.499 74007.5 1.0 3675 5704 9378 SUDHL4_400M_050219_2,9381 SUDHL4_400M_050219_2,9381,YLYPDITRL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9382 52.925 721.0 235010.0 25 0 16310.0 + 31047 RLIDLPGTEL 10 146 563.827113915074 1125.639674896948 2 563.8278076052666 MULTI CID FTMS 0 0 0 9378 117201.8671875 0.3013763617628726 -5 0.1978073120117187 4 Unmodified _RLIDLPGTEL_ ENSG00000213390|ENST00000358531|ARHGAP19;ENST00000493068.2_1_10:99025521-99052393:-|nuORF;nc|ENSG00000213390|Q14CB8-2|ARHGAP19;nc|ENSG00000213390|Q14CB8-3|ARHGAP19;nc|ENSG00000213390|Q14CB8-5|ARHGAP19;nc|ENSG00000213390|Q14CB8-6|ARHGAP19;nc|ENSG00000213390|Q14CB8-7|ARHGAP19 40.23920728925047 0.1550410903091231 6 {[QN]|[E{I|L}]|[KN]}[RV]{I|L}[PG]TE{I|L} 10 3 + 59.298 0.0 0.0 5.2679 5.2679 76.704 0.0 0.0 0.0 6.400194800948562 16.53212513775344 6.400194800948562 1.0771841425634676 0 0.7614393726401688 0.8239087409443188 1.089136830878453 0.2887254899964357 {[QN]|[E{I|L}]|[KN]}[RV]{I|L}[PG]TE{I|L};{[QN]|[E{I|L}]|[KN]}[RV]PAVTE{I|L};{[QN]|[E{I|L}]|[KN]}[RV]PG{I|L}TE{I|L};{[QN]|[E{I|L}]|[KN]}[PG]VVAVTE{I|L};{[QN]|[E{I|L}]|[KN]}[PG]VR{I|L}TE{I|L};{[QN]|[E{I|L}]|[KN]}[PG]VVG{I|L}TE{I|L};{[VA]|[{I|L}G]}[EP]VR{I|L}TE{I|L};{[VA]|[{I|L}G]}A[KQ]{I|L}[PG]TE{I|L};{[VA]|[{I|L}G]}A[KQ]PAVTE{I|L};{[QN]|[E{I|L}]|[KN]}[RP]VAVTE{I|L} 5.2679;5.1722;5.0861;4.9651;4.9157;4.879;4.6993;4.4997;4.404;4.3809 -;-;-;-;-;-;-;-;-;- 4513 1 1.499 132677.9 1.0 3676 5704 9378 SUDHL4_400M_050219_2,9382 SUDHL4_400M_050219_2,9382,RLIDLPGTEL False True RLIDLPGTEL 52.924633 563.8283 2185200.0 9378.0 nc|ENSG00000213390|Q14CB8-7|ARHGAP19;;nc|ENSG00000213390|Q14CB8-3|ARHGAP19;;ENST00000493068.2_1_10:99025521-99052393:-|nuORF;;nc|ENSG00000213390|Q14CB8-2|ARHGAP19;;nc|ENSG00000213390|Q14CB8-6|ARHGAP19;;nc|ENSG00000213390|Q14CB8-5|ARHGAP19;;ENSG00000213390|ENST00000358531|ARHGAP19 4.829495429992676 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9384 52.934 270.0 252600.0 25 0 17767.0 -1 0 81 974.9618713628414 1947.9091897924827 2 975.4644653201104 MULTI CID FTMS 0 0 0 9383 280490.34375 0.5286933826232011 3 -0.0912246704101562 1 6 [NP]{I|L}N{M(Oxidation (M))|F}V[H{I|L}]QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]} 17 -1 + 63.098 0.0 0.0 3.2393 3.2393 76.801 0.0 0.0 0.0 4.685210829577443 44.97180777949866 4.685210829577443 6.726410656136693 0 1.1505149978319906 0.0 0.0 1.086696871556164 [NP]{I|L}N{M(Oxidation (M))|F}V[H{I|L}]QDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}V[H{I|L}]QWN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}V[H{I|L}]QDAN{I|L}[DP]{[QN]|[E{I|L}]|[KN]};[NP]{I|L}N{M(Oxidation (M))|F}V[H{I|L}]DQAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};[NP]{I|L}N{M(Oxidation (M))|F}V[H{I|L}]QDAN{I|L}[DV][HC];[NP]{I|L}N{M(Oxidation (M))|F}V[H{I|L}]QDAN{I|L}{[HG]|PP}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}V[H{I|L}]QDYES{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}V[H{I|L}]QWN{I|L}[DP]{[QN]|[E{I|L}]|[KN]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}V[H{I|L}]QDYES{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[NP]{I|L}N{M(Oxidation (M))|F}V[H{I|L}]QDAN{[HG]|PP}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 3.2393;2.894;2.8281;2.685;2.645;2.5422;2.5094;2.4827;2.4479;2.3752 -;-;-;-;-;-;-;-;-;- 3943 1 1.499 51575.6 1.0 3677 5705 9383 SUDHL4_400M_050219_2,9384 SUDHL4_400M_050219_2,9384, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9385 52.946 694.0 158450.0 25 0 27537.0 22775 LQQRLLQL 8 101 506.3185518215714 1010.6225507099427 2 506.3176147341728 MULTI CID FTMS 0 0 0 9383 78760.1640625 0.1705461760496912 5 -0.1062812805175781 2 Unmodified _LQQRLLQL_ ENSG00000137877|ENST00000320955|SPTBN5;SPTBN5|p.M896Ifs*33|1|0.45|ENSG00000137877|chr15:41880283-41880284|-/ATGG|frameshift_variant 30.22481116460888 0.4082965392918993 6 [{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}Q{I|L} 10 4 + 55.896 0.0 0.0 5.5308 5.5308 83.703 0.0 0.0 0.0 11.876531584792502 16.532125137753432 11.876531584792502 6.53212513775344 0 0.7302046884880937 1.3979400086720375 0.0 0.0 [{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[{I|L}A][RN]{I|L}A{I|L}Q{I|L};[{I|L}A]G{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};[Q{I|L}]{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[{I|L}A][RN]{I|L}A{I|L}[AG]{I|L};{[VA]|[{I|L}G]}A{[NV]|[RG]}{I|L}A{I|L}Q{I|L};[Q{I|L}]{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L};{[VA]|[{I|L}G]}A{[NV]|[RG]}{I|L}A{I|L}[AG]{I|L} 5.5308;4.8845;4.624;4.3556;3.9733;3.478;3.4445;2.5712 -;-;-;-;-;-;-;- 199 1 1.499 92725.9 1.0 3678 5705 9383 SUDHL4_400M_050219_2,9385 SUDHL4_400M_050219_2,9385,LQQRLLQL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9387 52.954 296.0 195820.0 25 0 23987.0 + 20592 LLPDNFIAA 9 101 487.27126927319546 972.5279856131908 2 487.2715942263603 MULTI CID FTMS 0 0 0 9386 131830.5625 0.4270394972597498 -4 0.1307792663574218 1 Unmodified _LLPDNFIAA_ ENSG00000139684|ENST00000378720|ESD 21.74664581756881 0.2544899275067181 6 [{I|L}T]G{[QS]|[NT]}{[NV]|[RG]}[RV] 9 7 + 28.432 0.0 0.0 2.9236 2.9236 76.692 0.0 0.0 0.0 0.6141548967197998 5.935815256728251 0.6141548967197998 7.4361289856051584 0 0.0 1.6989700043360187 0.6747425010840047 0.7302046884880937 [{I|L}T]G{[QS]|[NT]}{[NV]|[RG]}[RV];{NN|[MP]|[D{I|L}]|[EV]}MN{I|L}{I|L}[RV];[{I|L}A]S{[QS]|[NT]}{[NV]|[RG]}[RV];{NN|[MP]|[D{I|L}]|[EV]}MQV{I|L}[RV];{[QV]|[N{I|L}]|[RA]|[KV]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{[NV]|[RG]}[RV] 2.9236;2.1589;1.6617;1.5525;0.0090551 -;-;-;-;- 256 1 1.499 47800.1 1.0 3679 5706 9386 SUDHL4_400M_050219_2,9387 SUDHL4_400M_050219_2,9387,LLPDNFIAA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9388 52.967 800.0 122060.0 25 0 9155.6 -1 RMDYPVFTV 9 104 572.2788201830451 1142.5430874328902 2 572.2795898318291 MULTI CID FTMS 0 0 0 9386 91546.484375 0.3578653882895732 -7 0.2499847412109375 2 Oxidation (M) _RM(Oxidation (M))DYPVFTV_ ENSG00000091490|ENST00000399878|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;nc|ENSG00000091490|Q68CR1-3|SEL1L3 29.84058131909904 0.1515068451768857 6 {M(Oxidation (M))|F}TV 3 -1 34.253 0.0 0.0 2.9979 0.0 0.0 777.3459876787871 0.0 777.3459876787871 0.0 18.856062735983127 0.0 0.0 0 1.0 0.0 0.805462187404089 0.0 {M(Oxidation (M))|F}TV 2.9979 + + 290 + 1 1.499 79282.3 0.4099999964237213 3680 5706 9386 SUDHL4_400M_050219_2,9388 SUDHL4_400M_050219_2,9388,RMDYPVFTV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9389 52.981 800.0 170400.0 25 0 11665.0 + 34004 SLIRNLEQL 9 129 543.3194492492004 1084.6243455652009 2 543.3192016482353 MULTI CID FTMS 0 0 0 9386 92825.609375 0.5018033227358542 -5 0.1591110229492187 3 Unmodified _SLIRNLEQL_ ENSG00000076944|ENST00000221283|STXBP2;ENST00000593854.5_1_19:7709481-7711320:+|nuORF;ENST00000601061.1_1_19:7710099-7712134:+|nuORF;nc|ENSG00000076944|Q15833-2|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2 67.83816525789305 0.0219346420158844 6 {[TV]|[{I|L}S]}{I|L}RN{I|L}EQ{I|L} 9 0 + 66.212 0.0 0.0 6.1046 6.1046 81.354 0.0 0.0 0.0 15.021014354703354 16.478174818886373 15.021014354703354 2.218487496163561 0 1.524227503252014 2.0 0.0 0.2887254899964357 + + {[TV]|[{I|L}S]}{I|L}RN{I|L}EQ{I|L};{[TV]|[{I|L}S]}{I|L}RQVEQ{I|L};{[TV]|[{I|L}S]}{I|L}RNE{I|L}Q{I|L};{[TV]|[{I|L}S]}{I|L}RGG{I|L}EQ{I|L};{[TV]|[{I|L}S]}{I|L}RN{I|L}E[AG]{I|L};{[TV]|[{I|L}S]}{I|L}RQD{I|L}Q{I|L};{[TV]|[{I|L}S]}{I|L}RDQ{I|L}Q{I|L};{[TV]|[{I|L}S]}{I|L}R[AG]VEQ{I|L};{[TV]|[{I|L}S]}{I|L}RQVE[AG]{I|L};[{I|L}T]VRN{I|L}EQ{I|L} 6.1046;5.9;5.3368;5.2556;5.2556;5.1322;5.0592;5.0511;5.0511;4.7197 +;-;-;-;-;-;-;-;-;- + 4861 1 1.499 104339.8 0.4199999868869781 3681 5706 9386 SUDHL4_400M_050219_2,9389 SUDHL4_400M_050219_2,9389,SLIRNLEQL True True SLIRNLEQL 52.981224 543.319201648235 977040.0625 9386.0 ENST00000593854.5_1_19:7709481-7711320:+|nuORF;;nc|ENSG00000076944|Q15833-2|STXBP2;;ENSG00000076944|ENST00000221283|STXBP2;;nc|ENSG00000076944|Q15833-3|STXBP2;;ENST00000601061.1_1_19:7710099-7712134:+|nuORF 5.40164311726888 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9391 52.986 108.0 653510.0 25 0 111100.0 + 37900 TLWPEVQKL 9 77 557.3188691838084 1112.6231854344169 2 557.3189575076103 MULTI CID FTMS 0 0 0 9390 482766.21875 0.8436070679315688 2 -0.0458335876464843 1 Unmodified _TLWPEVQKL_ ENSG00000134759|ENST00000358232|ELP2;ENST00000541294.1_1_18:33739943-33744659:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 45.69961567697781 0.0497987121815769 6 [{I|L}T]WPEVQK{I|L} 9 0 + 66.267 0.0 0.0 5.9559 5.9559 88.822 0.0 0.0 0.0 40.860435412461385 7.233071934441611 7.233071934441611 9.208187539523756 0 0.805462187404089 1.6989700043360187 0.0 1.1549471895720984 + + [{I|L}T]WPEVQK{I|L};[{I|L}T]WPEV[AG]K{I|L};[{I|L}T]W{I|L}[DP]QK{I|L};[{I|L}T]W{I|L}[DP][AG]K{I|L};[{I|L}T]WRRW[VP];[{I|L}T]W{I|L}[QT][VG][VP];[KQ]{I|L}{[ET]|[MV]}{I|L}W[VP];{[QV]|[N{I|L}]|[RA]|[KV]}K{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}W[VP];[KQ]{I|L}{[ET]|[MV]}{I|L}{[DA]|[EG]}[VP];[KQ]V{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}[VS][VP] 5.9559;5.1283;4.9906;4.163;3.3586;2.9349;2.3301;1.9289;1.5025;1.4154 +;-;-;-;-;-;-;-;-;- + 391 + 1 1.499 56790.8 1.0 3682 5707 9390 SUDHL4_400M_050219_2,9391 SUDHL4_400M_050219_2,9391,TLWPEVQKL True True TLWPEVQKL 52.986064 557.31895750761 17508300.0 9390.0 nc|ENSG00000134759|Q6IA86-7|ELP2;;nc|ENSG00000134759|Q6IA86-3|ELP2;;nc|ENSG00000134759|Q6IA86-4|ELP2;;nc|ENSG00000134759|Q6IA86-5|ELP2;;ENSG00000134759|ENST00000358232|ELP2;;ENST00000541294.1_1_18:33739943-33744659:+|nuORF;;nc|ENSG00000134759|Q6IA86-6|ELP2;;nc|ENSG00000134759|Q6IA86-2|ELP2 8.552507082621256 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9392 53.0 800.0 144640.0 25 0 5071.0 -1 0 115 1193.548592172261 3577.623947116982 3 1194.218798816204 MULTI CID FTMS 0 0 0 9390 224812.3125 0.6770108056435307 2 -0.0458335876464843 2 6 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQAED 14 -1 81.304 0.0 0.0 2.2726 0.0 0.0 1572.742795849207 333.13083826236567 1905.8736341115723 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 1.110924374808178 {M(Oxidation (M))|F}NNVQY{M(Oxidation (M))|F}ANQQAED 2.2726 - 10051 + 1 1.499 77201.0 0.800000011920929 3683 5707 9390 SUDHL4_400M_050219_2,9392 SUDHL4_400M_050219_2,9392, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9393 53.005 300.0 375090.0 25 0 40145.0 -1 LLDLMSDALIL 11 85 616.8461707848982 1231.6777886365962 2 616.8464843630791 MULTI CID FTMS 0 0 0 9390 189865.21875 0.060497837618625 -7 0.2518386840820312 3 Oxidation (M) _LLDLM(Oxidation (M))SDALIL_ ENSG00000152465|ENST00000378165|NMT2 24.99096001346401 0.505407273373304 6 {I|L}{I|L}{I|L}DVR 6 -1 77.766 0.0 0.0 6.3138 0.0 0.0 0.0 519.2219942682249 519.2219942682249 55.78408319022084 0.0 0.0 0.0 0 1.1861818737241734 2.0 0.0 0.3252574989159953 {I|L}{I|L}{I|L}DVR 6.3138 - 276 + 1 1.499 89227.8 1.0 3684 5707 9390 SUDHL4_400M_050219_2,9393 SUDHL4_400M_050219_2,9393,LLDLMSDALIL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9394 53.016 595.0 288180.0 25 0 70857.0 + 20293 LLDVPTAAV 9 91 898.5227177592883 897.5154412926883 1 898.5235473513603 MULTI CID FTMS 0 0 0 -1 0 4 Unmodified _LLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 78.14939416004806 0.0179651292570206 6 {I|L}{I|L}DVPTAAV 9 0 + 66.473 0.0 0.0 7.4063 7.4063 90.014 0.0 0.0 0.0 19.62189282359298 39.42947645042226 19.62189282359298 8.115739144952101 0 1.4489700043360187 1.3979400086720375 0.8494850021680094 0.0 + + {I|L}{I|L}DVPTAAV;{I|L}{I|L}DVATPAV;{I|L}{I|L}DPVTAAV;{I|L}{I|L}[VS]PAEAV;{I|L}{I|L}DVP[SG]VV;{I|L}{I|L}[VS]APEAV;{I|L}{I|L}DP[TA]VAV;[VS]{I|L}{I|L}PAEAV;{I|L}{I|L}DVP{[QD]|[EN]|[WG]|[KD]|[RS]}V;[VS]{I|L}{I|L}APEAV 7.4063;6.5021;6.2205;5.6913;5.6702;5.6031;5.5868;5.1597;5.1583;5.0715 +;-;-;-;-;-;-;-;-;- + 1990 1 1.499 120215.1 1.0 3685 5707 9390 SUDHL4_400M_050219_2,9394 SUDHL4_400M_050219_2,9394,LLDVPTAAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9396 53.021 63.0 622180.0 25 0 59588.0 + -1 ALWDIETGQQTV 12 73 680.8408039882146 1359.667055043229 2 680.8409911990166 MULTI CID FTMS 0 0 0 9395 733343.875 0.5349891068968557 3 -0.0421104431152343 1 Oxidation (M) _LSHIWVM(Oxidation (M))MTQV_ ENSG00000172354|ENST00000303210|GNB2;nc|ENSG00000172354|P62879-2|GNB2 13.042465956692816 0.7638483625850725 6 {NN|[MP]|[D{I|L}]|[EV]}WA{I|L}E 6 -1 34.575 0.0 0.0 2.5429 0.0 0.0 0.0 629.2912191010047 629.2912191010047 6.474315640635588 0.0 0.0 0.0 0 0.3494850021680094 1.2218487496163564 0.0 0.4247425010840047 {NN|[MP]|[D{I|L}]|[EV]}WA{I|L}E 2.5429 - 802 1 1.499 39025.0 1.0 3686 5708 9395 SUDHL4_400M_050219_2,9396 SUDHL4_400M_050219_2,9396,LSHIWVMMTQV False False ALWDIETGQQTV 53.02129 680.840991199017 16460003.0 9395.0 ENSG00000172354|ENST00000303210|GNB2;;nc|ENSG00000172354|P62879-2|GNB2 6.598576704661052 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9397 53.027 316.0 157080.0 25 0 11710.0 + 16502 KALQFLEEV 9 90 538.8032091052293 1075.5918652772584 2 538.8029052615166 MULTI CID FTMS 0 0 0 9395 126507.015625 0.6726285198781194 -2 0.0702781677246093 2 Unmodified _KALQFLEEV_ ENSG00000146731|ENST00000275603|CCT6A;nc|ENSG00000146731|P40227-2|CCT6A 41.95555342248728 0.0647214845423414 6 [{I|L}A]KQ{M(Oxidation (M))|F}{I|L}EEV 9 2 + 46.594 0.0 0.0 4.332 4.332 75.488 0.0 0.0 0.0 2.218487496163561 5.558933348155222 2.218487496163561 2.218487496163561 0 0.6237125054200234 0.0 0.0 1.579689690656103 [{I|L}A]KQ{M(Oxidation (M))|F}{I|L}EEV;[Q{I|L}]AK{M(Oxidation (M))|F}{I|L}EEV;[{I|L}A]QK{M(Oxidation (M))|F}{I|L}EEV;[{I|L}A]GAK{M(Oxidation (M))|F}{I|L}EEV;{[QN]|[E{I|L}]|[KN]}VV{M(Oxidation (M))|F}{I|L}EEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}Q[KA]{I|L}EEV;[{I|L}A]K[AG]{M(Oxidation (M))|F}{I|L}EEV;[Q{I|L}]{M(Oxidation (M))|F}[KA]{I|L}EEV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}VV{I|L}EEV;[{M(Oxidation (M))|F}V]E{I|L}[KA]{I|L}{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.332;4.1257;3.8884;3.8458;3.7783;3.6419;3.4759;3.4754;3.3081;3.2446 -;-;-;-;-;-;-;-;-;- 348 1 1.499 49340.8 1.0 3687 5708 9395 SUDHL4_400M_050219_2,9397 SUDHL4_400M_050219_2,9397,KALQFLEEV True True KALQFLEEV 53.027057 538.8038 1035627.0625 9395.0 nc|ENSG00000146731|P40227-2|CCT6A;;ENSG00000146731|ENST00000275603|CCT6A 2.740788300832113 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9400 53.047 800.0 94715.0 25 0 7120.4 + 20500 LLLFWHYAW 9 85 416.8886751465685 1247.6441960399056 3 416.8886901736259 MULTI CID FTMS 0 0 0 9399 86935.828125 0.2306177283451632 -4 0.0853347778320312 1 Unmodified _LLLFWHYAW_ REV__ENST00000557374.1_1_14:52957560-53019203:-|nuORF 9.38312468134398 0.5871240394367778 6 {I|L}{I|L}{I|L}DVA 6 -1 63.889 0.0 0.0 5.1207 0.0 0.0 0.0 620.2382557299975 620.2382557299975 50.70107520596089 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}{I|L}DVA 5.1207 - 181 + 1 1.499 76139.6 0.449999988079071 3688 5710 9399 SUDHL4_400M_050219_2,9400 SUDHL4_400M_050219_2,9400,LLLFWHYAW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9401 53.058 613.0 222220.0 25 0 23480.0 + -1 LLLDAMPFDVV 11 100 624.8304586077347 1247.6463642822694 2 624.8312255740166 MULTI CID FTMS 0 0 0 9399 144840.515625 0.2384466298224528 -4 0.0853347778320312 2 Oxidation (M) _LLLDAM(Oxidation (M))PFDVV_ REV__ENSG00000142082|ENST00000382743|SIRT3;REV__nc|ENSG00000142082|Q9NTG7-2|SIRT3 21.53697664764585 0.586507868110548 6 {I|L}{I|L}{I|L}DVA 6 -1 68.365 0.0 0.0 5.4795 0.0 0.0 0.0 620.2422579400999 620.2422579400999 37.84440644703906 0.0 0.0 0.0 0 1.1989700043360187 2.0 0.0 0.0 {I|L}{I|L}{I|L}DVA 5.4795 - 188 + 1 1.499 107461.1 1.0 3689 5710 9399 SUDHL4_400M_050219_2,9401 SUDHL4_400M_050219_2,9401,LLLDAMPFDVV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9403 53.069 451.0 256710.0 25 0 34049.0 + 33882 SLFPGKLEV 9 99 495.2870428723804 988.5595328115608 2 495.2873412966728 MULTI CID FTMS 0 0 0 9402 197024.984375 0.2025643730209988 9 -0.5082778930664062 1 Unmodified _SLFPGKLEV_ ENSG00000177731|ENST00000327031|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENST00000580966.1_1_17:18149569-18150009:-|nuORF;nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII 32.78568957990786 0.1150597335874693 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{I|L}PN 8 5 61.955 0.0 0.0 6.2672 0.0 0.0 0.0 68.0514391534789 68.0514391534789 39.612041883872834 0.0 0.0 0.0 0 1.0629529932484498 2.0 0.0 0.1595680409956017 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{M(Oxidation (M))|F}V{I|L}PN 6.2672 - 504 + 1 1.499 91870.4 1.0 3690 5711 9402 SUDHL4_400M_050219_2,9403 SUDHL4_400M_050219_2,9403,SLFPGKLEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9404 53.076 426.0 135210.0 25 0 14496.0 + 44339 YLPPGFLSA 9 78 482.7608035732731 963.5070542133462 2 482.7609130740166 MULTI CID FTMS 0 0 0 9402 118277.46875 0.5057229694623753 -5 0.1123886108398437 2 Unmodified _YLPPGFLSA_ ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-4|SREBF1 30.22481116460888 0.1466181017706357 6 [Y{I|L}]P 3 6 28.684 0.0 0.0 2.9771 0.0 0.0 0.0 587.2832735650999 587.2832735650999 -0.5237875363565792 0.0 -0.5237875363565792 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [Y{I|L}]P 2.9771 + + 109 + 1 1.499 53256.7 1.0 3691 5711 9402 SUDHL4_400M_050219_2,9404 SUDHL4_400M_050219_2,9404,YLPPGFLSA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9405 53.09 800.0 77111.0 25 0 5768.5 20338 LLFHRSLWLL 10 88 649.3899838488311 1296.765414764462 2 649.3897582888603 MULTI CID FTMS 0 0 0 9402 101591.4375 0.4924009713439891 -3 0.0421104431152343 3 Unmodified _LLFHRSLWLL_ ENST00000415955.5_1_2:175939332-175939395:-|nuORF 7.289230182591677 0.6929195370588109 6 {I|L}{I|L}DV{I|L}CV 7 7 38.593 0.0 0.0 2.9761 0.0 0.0 0.0 538.3271846774838 538.3271846774838 2.754085048539352 0.0 0.0 0.0 0 0.0 2.0 0.3054621874040891 0.0 {I|L}{I|L}DV{I|L}CV 2.9761 - 1633 1 1.499 69676.8 0.4300000071525574 3692 5711 9402 SUDHL4_400M_050219_2,9405 SUDHL4_400M_050219_2,9405,LLFHRSLWLL False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9406 53.104 800.0 57533.0 25 0 1767.8 -1 0 89 1159.2858543293162 4633.114311450865 4 1160.294726550579 MULTI CID FTMS 0 0 0 9402 88060.046875 0.5361100026397209 -3 0.0421104431152343 4 6 GMRR 4 -1 12.907 0.0 0.0 0.27859 0.0 0.0 3129.93335549559 999.9196871393186 4129.853042634909 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 GMRR 0.27859 - 43 + 1 1.499 36508.6 0.4600000083446502 3693 5711 9402 SUDHL4_400M_050219_2,9406 SUDHL4_400M_050219_2,9406, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9409 53.112 74.0 733610.0 25 0 51821.0 + 31311 RMDYPVFTV 9 78 564.2813791801357 1126.5482054270713 2 564.2817870974541 MULTI CID FTMS 0 0 0 9408 432065.5 0.9774198218741446 1 -0.0683555603027343 1 Unmodified _RMDYPVFTV_ ENSG00000091490|ENST00000399878|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;nc|ENSG00000091490|Q68CR1-3|SEL1L3 21.53697664764585 0.2571576504437394 6 {NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}Y[VP]{M(Oxidation (M))|F}TV 10 3 + 27.086 0.0 0.0 2.4043 2.4043 80.884 0.0 0.0 0.0 1.14393726401687 7.093240100461884 1.14393726401687 14.999999999999996 0 0.6677353201839438 1.2218487496163564 0.3807196863200844 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}Y[VP]{M(Oxidation (M))|F}TV;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}EV;{[QN]|[E{I|L}]|[KN]}[YC(Carbamidomethyl (C))][VP]{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}T][WM][VP]{M(Oxidation (M))|F}TV;{[ET]|[MV]}T{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}[VP]{M(Oxidation (M))|F}TV 2.4043;1.0728;0.98179;0.82548;0.60368 -;-;-;-;- 150 1 1.499 47265.2 1.0 3694 5713 9408 SUDHL4_400M_050219_2,9409 SUDHL4_400M_050219_2,9409,RMDYPVFTV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9410 53.126 800.0 122420.0 25 0 11098.0 + -1 LLLRVCDFQA 10 112 412.226194174179 1233.656753122737 3 412.2253600955009 MULTI CID FTMS 0 0 0 9408 126303.3984375 0.6902205756909064 -1 0.0038795471191406 2 Carbamidomethyl (C) _LLLRVC(Carbamidomethyl (C))DFQA_ REV__ENSG00000161664|ENST00000293414|ASB16 6.630372943996041 0.695967137280542 6 {I|L}{I|L}D{[YD]|[{M(Oxidation (M))|F}M]}V{I|L}{I|L}[RD] 10 -1 + 27.393 0.0 0.0 2.2205 2.2205 50.536 0.0 0.0 0.0 10.44286205805598 0.4820995293722774 0.4820995293722774 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}D{[YD]|[{M(Oxidation (M))|F}M]}V{I|L}{I|L}[RD];{I|L}{I|L}D{[YD]|[{M(Oxidation (M))|F}M]}{I|L}{I|L}V[RD];{I|L}{I|L}[WH][QP]AV[RD];{I|L}{I|L}D{I|L}[YN]AA[WR];[QP]WH{I|L}{I|L}AV[RD];[QA]P[RP][QP]AV[RD];[PG]AWH{I|L}{I|L}AV[RD];[QP]WHA{I|L}{I|L}V[RD];[QP]WHAV{I|L}{I|L}[RD];[QP]WHG{I|L}{I|L}{I|L}[RD] 2.2205;2.2205;2.0407;2.0323;1.0829;0.75813;0.71897;0.69614;0.69614;0.59487 -;-;-;-;-;-;-;-;-;- 678 1 1.499 83126.7 0.6000000238418579 3695 5713 9408 SUDHL4_400M_050219_2,9410 SUDHL4_400M_050219_2,9410,LLLRVCDFQA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9411 53.14 800.0 235160.0 25 0 18322.0 + 14921 ILMDERTFL 9 115 569.3023801336873 1136.5902073341745 2 569.3022949099541 MULTI CID FTMS 0 0 0 9408 114512.8359375 0.4039039766414475 6 -0.3958625793457031 3 Unmodified _ILMDERTFL_ ENSG00000115464|ENST00000398571|USP34;ENST00000463046.5_1_2:61417336-61434009:-|nuORF;nc|ENSG00000115464|Q70CQ2-2|USP34;nc|ENSG00000115464|Q70CQ2-3|USP34 23.78978130925829 0.2284941198415988 6 {I|L}{I|L}M[NP]QVN 8 6 59.628 0.0 0.0 5.2462 0.0 0.0 0.0 224.10492883853752 224.10492883853752 18.9363034371533 0.0 0.0 0.0 0 0.3252574989159953 2.0 0.0 0.0 {I|L}{I|L}M[NP]QVN 5.2462 - 1051 + 1 1.499 145490.8 0.5799999833106995 3696 5713 9408 SUDHL4_400M_050219_2,9411 SUDHL4_400M_050219_2,9411,ILMDERTFL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9412 53.148 481.0 179460.0 25 0 22693.0 + 33891 SLFPHNPQFI 10 97 600.3145873579687 1198.6146217827372 2 600.3141967654228 MULTI CID FTMS 0 0 0 9408 92420.5703125 0.3711618716561232 -3 0.0765304565429687 4 Unmodified _SLFPHNPQFI_ ENSG00000117133|ENST00000370654|RPF1;WARS2-RPF1|1|fusion 53.4695610476455 0.0597873748650233 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}R{[TV]|[{I|L}S]}NC{M(Oxidation (M))|F}{I|L} 10 5 + 68.703 0.0 0.0 5.7319 5.7319 82.607 0.0 0.0 0.0 31.56295947543775 13.521825181113629 13.521825181113629 4.414543788274798 0 1.6307196863200843 2.0 0.0 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}R{[TV]|[{I|L}S]}NC{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PHNPQ{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RN{[TV]|[{I|L}S]}C{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}R{[TV]|[{I|L}S]}GGC{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RNC{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}R{M(Oxidation (M))|F}AAQ{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}R{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))G]|[NC]}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}RGG{[TV]|[{I|L}S]}C{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[VG][WK]C{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PHNR{[ES]|[DT]|[{I|L}C]}{I|L} 5.7319;5.3636;5.2296;4.9673;4.6522;4.5909;4.5847;4.465;4.4187;4.0552 -;+;-;-;-;-;-;-;-;- + 1152 + 1 1.499 65902.1 1.0 3697 5713 9408 SUDHL4_400M_050219_2,9412 SUDHL4_400M_050219_2,9412,SLFPHNPQFI True True SLFPHNPQFI 53.148388 600.314196765423 3841541.5 9408.0 ENSG00000117133|ENST00000370654|RPF1;;WARS2-RPF1|1|fusion 6.458719889322917 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9413 53.162 800.0 113100.0 25 0 9706.8 + 11628 GLAKLIADV 9 126 450.28232745100553 898.5501019688111 2 450.2818481326103 MULTI CID FTMS 0 0 0 9408 134078.640625 1.0 0 0.0 5 Unmodified _GLAKLIADV_ ENSG00000168496|ENST00000305885|FEN1;ENST00000401028.2_1_1:91793937-91794252:+|nuORF 60.07390631473393 0.0260411565414776 6 {[VA]|[{I|L}G]}AK{I|L}{I|L}ADV 9 0 + 83.254 0.0 0.0 9.2654 9.2654 90.707 0.0 0.0 0.0 20.63650369906071 65.6440386808135 20.63650369906071 6.020599913279625 0 2.1861818737241734 2.0 0.0 0.0 + + {[VA]|[{I|L}G]}AK{I|L}{I|L}ADV;{[VA]|[{I|L}G]}A{I|L}K{I|L}ADV;{[VA]|[{I|L}G]}AK{I|L}A{I|L}DV;{[VA]|[{I|L}G]}A{I|L}KA{I|L}DV;[KA]{I|L}G{I|L}{I|L}ADV;[KA]{I|L}{I|L}G{I|L}ADV;[Q{I|L}]K{I|L}{I|L}ADV;{[VA]|[{I|L}G]}AK{I|L}E{[VA]|[{I|L}G]}V;{I|L}{I|L}QK{I|L}ADV;[Q{I|L}]{I|L}K{I|L}ADV 9.2654;8.5953;8.2617;7.5916;6.3299;6.3299;6.2931;6.1494;5.925;5.6231 +;-;-;-;-;-;-;-;-;- + 1158 1 1.499 75425.2 0.6000000238418579 3698 5713 9408 SUDHL4_400M_050219_2,9413 SUDHL4_400M_050219_2,9413,GLAKLIADV True True GLAKLIADV 53.162202 450.28184813261 608202.0 9408.0 ENSG00000168496|ENST00000305885|FEN1;;ENST00000401028.2_1_1:91793937-91794252:+|nuORF 5.7432066599528 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9414 53.176 800.0 201670.0 25 0 18429.0 + -1 LIDRVTNCACV 11 101 632.3122768227104 1262.6100007122209 2 632.8135253787041 MULTI CID FTMS 0 0 0 9408 117226.90625 1.0 0 0.0 6 Carbamidomethyl (C) _LIDRVTNC(Carbamidomethyl (C))ACV_ REV__ENSG00000164941|ENST00000523731|INTS8;REV__ENST00000523206.5_1_8:95850795-95884149:+|nuORF;REV__ENST00000523321.5_1_8:95835614-95871872:+|nuORF;REV__nc|ENSG00000164941|Q75QN2-2|INTS8 7.608950283845883 0.8392484121837455 6 {I|L}{I|L}D 3 -1 25.062 0.0 0.0 1.9849 0.0 0.0 0.0 918.391591858958 918.391591858958 3.863781092484686 0.0 0.0 0.0 0 0.0 2.0 0.0 0.0 {I|L}{I|L}D 1.9849 + + 150 1 1.499 123700.4 0.6000000238418579 3699 5713 9408 SUDHL4_400M_050219_2,9414 SUDHL4_400M_050219_2,9414,LIDRVTNCACV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9416 53.181 1.2 36008000.0 25 0 2622200.0 + 28518 LLLDVPTAAVQA 12 76 605.855554337379 1209.696555741558 2 605.8564941287041 MULTI CID FTMS 0 0 0 9415 42493420.0 0.984553964599503 1 -0.0454750061035156 1 Unmodified _PTLQEVILANL_ ENSG00000216490|ENST00000407280|IFI30 21.59015148037692 0.5852593066373742 6 [TP]AAVD{I|L}{I|L}{I|L} 9 6 38.057 0.0 0.0 3.146 0.0 0.0 0.0 313.14929254111445 313.14929254111445 8.619809006307285 0.0 0.0 0.0 0 0.3494850021680094 0.8860566476931632 1.363982988912431 0.0 [TP]AAVD{I|L}{I|L}{I|L} 3.146 - 433 1 1.499 35211.3 1.0 3700 5714 9415 SUDHL4_400M_050219_2,9416 SUDHL4_400M_050219_2,9416,PTLQEVILANL False False LLLDVPTAAVQA 53.18059 605.856494128704 1430270080.0 9415.0 ENSG00000216490|ENST00000407280|IFI30 6.958131313323975 2.0 False 12.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9417 53.186 297.0 219370.0 25 0 20250.0 + 44413 YLYPDITRL 9 87 577.3183938521897 1152.6222347711794 2 577.3182250857353 MULTI CID FTMS 0 0 0 9415 95345.5859375 0.193620111709863 6 -0.3904457092285156 2 Unmodified _YLYPDITRL_ ENSG00000131389|ENST00000622186|SLC6A6 15.248480904072842 0.4239247793462406 6 [Y{I|L}]YPD{I|L} 6 3 53.901 0.0 0.0 4.6764 0.0 0.0 0.0 385.2207735651001 385.2207735651001 39.20818753952375 0.0 0.0 0.0 0 0.8494850021680094 2.0 0.0 0.0 + [Y{I|L}]YPD{I|L} 4.6764 + + 80 + 1 1.499 50905.4 1.0 3701 5714 9415 SUDHL4_400M_050219_2,9417 SUDHL4_400M_050219_2,9417,YLYPDITRL False True YLYPDITRL 53.18604 577.318225085735 2612037.25 9415.0 ENSG00000131389|ENST00000622186|SLC6A6 3.938920338948568 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9418 53.2 800.0 74932.0 25 0 26150.0 22851 LRWRQMKRKR 10 68 729.4383627389402 1456.8621725446803 2 729.4376098513603 MULTI CID FTMS 0 0 0 9415 123789.109375 0.5376357432186158 -4 0.1448860168457031 3 Unmodified _LRWRQMKRKR_ ENST00000229214.8_1_12:75893569-75893638:-|nuORF 0.4007161486938917 0.7247829448918255 6 W 1 9 2.4743 0.0 0.0 0.16983 0.0 0.0 845.4942048706554 422.27558313541255 1267.769788006068 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + W 0.16983 + + 13 + 1 1.499 55701.1 0.5099999904632568 3702 5714 9415 SUDHL4_400M_050219_2,9418 SUDHL4_400M_050219_2,9418,LRWRQMKRKR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9419 53.21 604.0 233190.0 25 0 24090.0 + 9206 FGGVLILIHR 10 112 375.5693376546222 1123.6861835640666 3 375.5692626833916 MULTI CID FTMS 0 0 0 9415 170334.171875 0.0146255952101382 -6 0.159942626953125 4 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 24.020572477871973 0.4289996903560794 6 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 90.812 0.0 0.0 8.0816 8.0816 93.05 0.0 0.0 0.0 81.13444019094996 21.52249673628745 21.52249673628745 9.208187539523747 0 0.6861818737241735 2.0 0.0 1.535666875892183 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 8.0816;7.2622 -;- 135 + 1 1.499 115139.7 1.0 3703 5714 9415 SUDHL4_400M_050219_2,9419 SUDHL4_400M_050219_2,9419,FGGVLILIHR False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9420 53.221 627.0 131570.0 25 0 12279.0 -1 0 82 966.9629772845273 1931.9114016358544 2 967.4601318240166 MULTI CID FTMS 0 0 0 9415 100144.4765625 0.1167323304027706 14 -0.6475486755371094 5 6 DAD{I|L}NP[EP] 8 -1 37.612 0.0 0.0 1.9469 0.0 0.0 1062.543840097955 0.0 1062.543840097955 0.0 17.981143182653053 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 DAD{I|L}NP[EP] 1.9469 - 449 1 1.499 59604.2 1.0 3704 5714 9415 SUDHL4_400M_050219_2,9420 SUDHL4_400M_050219_2,9420, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9422 53.23 356.0 190130.0 25 0 17865.0 + -1 RMDYPVFTV 9 78 572.2788201830451 1142.5430874328902 2 572.2789794802666 MULTI CID FTMS 0 0 0 9421 135015.21875 0.5277895051114072 2 -0.1468925476074218 1 Oxidation (M) _RM(Oxidation (M))DYPVFTV_ ENSG00000091490|ENST00000399878|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;nc|ENSG00000091490|Q68CR1-3|SEL1L3 29.84058131909904 0.1515068451768857 6 YPV{M(Oxidation (M))|F}TV 6 -1 36.643 0.0 0.0 3.2072 0.0 0.0 418.1643239790792 0.0 418.1643239790792 0.0 16.46591250700361 0.0 0.0 0 1.1237125054200234 0.0 0.0 0.0 YPV{M(Oxidation (M))|F}TV 3.2072 + + 111 1 1.499 58130.2 1.0 3705 5715 9421 SUDHL4_400M_050219_2,9422 SUDHL4_400M_050219_2,9422,RMDYPVFTV False False RMDYPVFTV 53.230254 572.278979480267 4054887.75 9421.0 ENSG00000091490|ENST00000399878|SEL1L3;;nc|ENSG00000091490|Q68CR1-2|SEL1L3;;nc|ENSG00000091490|Q68CR1-3|SEL1L3 7.105783780415853 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9423 53.235 284.0 263560.0 25 0 27872.0 14610 IIFTGPSITSL 11 96 574.8323497512383 1147.6501465692766 2 574.8322021365166 MULTI CID FTMS 0 0 0 9421 177494.703125 0.8861595763593965 -1 0.0454750061035156 2 Unmodified _IIFTGPSITSL_ ENSG00000177614|ENST00000391860|PGBD5;nc|ENSG00000177614|Q8N414-2|PGBD5 34.40172386719151 0.2986346176549658 6 {I|L}{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}E{I|L}ND 9 7 84.277 0.0 0.0 7.3434 0.0 0.0 0.0 82.06701074771718 82.06701074771718 60.31446486869426 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.5356668758921828 0.0 {I|L}{I|L}{M(Oxidation (M))|F}A{M(Oxidation (M))|F}E{I|L}ND 7.3434 - 1423 + 1 1.499 61312.0 1.0 3706 5715 9421 SUDHL4_400M_050219_2,9423 SUDHL4_400M_050219_2,9423,IIFTGPSITSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9424 53.245 529.0 277570.0 25 0 33363.0 34110 SLLPPTALV 9 114 455.7842287206475 909.553904508095 2 455.7839233279228 MULTI CID FTMS 0 0 0 9421 156667.890625 0.6453674127574882 -2 0.11383056640625 3 Unmodified _SLLPPTALV_ ENSG00000100934|ENST00000307712|SEC23A;ENST00000555682.1_1_14:39560581-39561747:-|nuORF 36.04419817259434 0.0971720506436186 6 {I|L}{I|L}D{I|L} 4 6 33.5 0.0 0.0 3.6831 0.0 0.0 0.0 452.2520911138169 452.2520911138169 5.448079876813765 0.0 0.0 0.0 0 0.3807196863200844 2.0 0.0 0.0 {I|L}{I|L}D{I|L} 3.6831 - 393 1 1.499 115555.9 1.0 3707 5715 9421 SUDHL4_400M_050219_2,9424 SUDHL4_400M_050219_2,9424,SLLPPTALV True False ALPPVLTTV 53.244789 455.783923327923 1613188.875 9421.0 ENSG00000155506|ENST00000518297|LARP1 3.027331988016764 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9425 53.259 800.0 106560.0 25 0 16398.0 14723 IKPKIQRPNTT 11 93 432.5976075762603 1294.770993328981 3 432.5976745486259 MULTI CID FTMS 0 0 0 9421 123901.0546875 0.6898273515051742 -1 0.0454750061035156 4 Unmodified _IKPKIQRPNTT_ ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF;nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1 1.1933415558491238 0.8695176722560516 6 P 1 10 0.48455 0.0 0.0 0.037424 0.0 0.0 1074.6400099078855 120.0508288019164 1194.690838709802 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + P 0.037424 + + 9 + 1 1.499 81293.1 0.449999988079071 3708 5715 9421 SUDHL4_400M_050219_2,9425 SUDHL4_400M_050219_2,9425,IKPKIQRPNTT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9426 53.268 529.0 208030.0 25 0 17042.0 + 31015 RLFDEPQLASL 11 113 644.8480378947502 1287.6815228563005 2 644.8481933474541 MULTI CID FTMS 0 0 0 9421 104938.9765625 0.4735270983279708 -2 0.11383056640625 5 Unmodified _RLFDEPQLASL_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1 42.83518252547288 0.1687213420692654 6 [{I|L}T]G{I|L}{M(Oxidation (M))|F}EPQ{I|L}AS{I|L} 12 4 + 87.116 0.0 0.0 6.7653 6.7653 85.064 0.0 0.0 0.0 3.679767852945943 15.10666445614629 3.679767852945943 3.679767852945943 0 1.2887254899964358 1.5228787452803376 0.5 0.0 [{I|L}T]G{I|L}{M(Oxidation (M))|F}EPQ{I|L}AS{I|L};{[TV]|[{I|L}S]}A{I|L}{M(Oxidation (M))|F}EPQ{I|L}AS{I|L};[{I|L}T]GE{I|L}{M(Oxidation (M))|F}PQ{I|L}AS{I|L};{[TV]|[{I|L}S]}AE{I|L}{M(Oxidation (M))|F}PQ{I|L}AS{I|L};[{I|L}T]G{I|L}{M(Oxidation (M))|F}EP[AG]{I|L}AS{I|L};[{I|L}A]S{I|L}{M(Oxidation (M))|F}EPQ{I|L}AS{I|L};{[TV]|[{I|L}S]}A{I|L}{M(Oxidation (M))|F}EP[AG]{I|L}AS{I|L};[{I|L}T]GE{I|L}{M(Oxidation (M))|F}P[AG]{I|L}AS{I|L};{[SA]|[TG]}{I|L}{I|L}{M(Oxidation (M))|F}EPQ{I|L}AS{I|L};[{I|L}A]SE{I|L}{M(Oxidation (M))|F}PQ{I|L}AS{I|L} 6.7653;6.4796;6.4433;6.1575;6.0588;5.7947;5.773;5.7367;5.7194;5.4726 -;-;-;-;-;-;-;-;-;- 4015 1 1.499 87368.8 1.0 3709 5715 9421 SUDHL4_400M_050219_2,9426 SUDHL4_400M_050219_2,9426,RLFDEPQLASL False True RLFDEPQLASL 53.267929 644.848193347454 3684750.0 9421.0 nc|ENSG00000064726|Q9H0C5-2|BTBD1;;ENSG00000064726|ENST00000261721|BTBD1;;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;;ENSG00000133243|ENST00000255608|BTBD2 7.818962097167969 2.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9427 53.282 800.0 87680.0 25 0 4859.3 5209 DIVLLLSQKQA 11 68 614.3681423178383 1226.7217317024763 2 614.3683959841728 MULTI CID FTMS 0 0 0 9421 100524.3671875 0.7072530834509146 1 -0.0786705017089843 6 Unmodified _DIVLLLSQKQA_ ENSG00000151422|ENST00000281092|FER;nc|ENSG00000151422|P16591-2|FER 12.240655878213236 0.7805268987462184 6 {I|L}{I|L}{I|L} 3 8 15.942 0.0 0.0 1.2996 0.0 0.0 0.0 884.445461521089 884.445461521089 5.484550065040281 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.0 + {I|L}{I|L}{I|L} 1.2996 + + 82 1 1.499 59597.6 0.449999988079071 3710 5715 9421 SUDHL4_400M_050219_2,9427 SUDHL4_400M_050219_2,9427,DIVLLLSQKQA False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9428 53.296 800.0 180770.0 25 0 12952.0 + -1 MNWRYCRLWCL 11 118 837.3802395860654 1672.745926238931 2 837.8824951052666 MULTI CID FTMS 0 0 0 9421 86492.5234375 0.3130291376376223 -2 0.11383056640625 7 2 Carbamidomethyl (C),Oxidation (M) _M(Oxidation (M))NWRYC(Carbamidomethyl (C))RLWC(Carbamidomethyl (C))L_ REV__ENST00000584052.5_1_18:21043977-21044085:+|nuORF 1.4819007175156935 0.86815623132643 6 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 12 -1 92.884 0.0 0.0 5.5528 0.0 0.0 248.09178359199376 0.0 248.09178359199376 0.0 63.73700002365759 0.0 0.0 0 1.048455006504028 0.0 0.3807196863200844 1.5138793319624575 DEAQQNA{M(Oxidation (M))|F}YQV{I|L} 5.5528 - 1247 1 1.499 101765.5 0.4300000071525574 3711 5715 9421 SUDHL4_400M_050219_2,9428 SUDHL4_400M_050219_2,9428,MNWRYCRLWCL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9429 53.3 143.0 623520.0 25 0 41744.0 -1 0 89 902.4171593376232 1802.8197657420465 2 902.9169799685478 MULTI CID FTMS 0 0 0 9421 169125.109375 0.1079245418095655 -3 0.1177101135253906 8 6 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F}YE 13 -1 64.169 0.0 0.0 3.5594 0.0 0.0 0.0 226.13748970128395 226.13748970128395 45.75235139997847 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.3807196863200844 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F}YE 3.5594 - 2960 1 1.499 65196.8 1.0 3712 5715 9421 SUDHL4_400M_050219_2,9429 SUDHL4_400M_050219_2,9429, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9431 53.306 110.0 573190.0 25 0 66472.0 + 20414 LLIDAGQLYLN 11 58 616.8461707848982 1231.6777886365962 2 616.8462402224541 MULTI CID FTMS 0 0 0 9430 416125.5625 0.1325924615094044 2 -0.1190071105957031 1 Unmodified _LLIDAGQLYLN_ REV__chr20:47757463-47764212|13|19.77|0.06|8.41|-|2|TE_info:L2a,L2a_dup163485,L2,LINE,donor,+,47764212,47764377|SULF2,None|1 29.84058131909904 0.3915366693542702 6 {I|L}{I|L}{I|L}DVP 6 -1 74.954 0.0 0.0 6.0855 0.0 0.0 0.0 578.2573946588499 578.2573946588499 61.008789897260414 0.0 0.0 0.0 0 1.2302046884880935 2.0 0.0 0.0 {I|L}{I|L}{I|L}DVP 6.0855 - 202 + 1 1.499 51501.8 1.0 3713 5716 9430 SUDHL4_400M_050219_2,9431 SUDHL4_400M_050219_2,9431,LLIDAGQLYLN False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9432 53.316 552.0 185640.0 25 0 28729.0 + 37901 TLWPEVQKL 9 103 557.3188691838084 1112.6231854344169 2 557.3187744021416 MULTI CID FTMS 0 0 0 9430 168140.625 0.2938163735310683 11 -0.5193328857421875 2 Unmodified _TLWPEVQKL_ ENSG00000134759|ENST00000358232|ELP2;ENST00000541294.1_1_18:33739943-33744659:+|nuORF;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-4|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2;nc|ENSG00000134759|Q6IA86-7|ELP2 62.57269311338072 0.0246576765497938 6 [{I|L}T]WPEVQK{I|L} 9 0 + 73.3 0.0 0.0 6.588 6.588 82.835 0.0 0.0 0.0 38.88235311828623 6.661356742248529 6.661356742248529 2.271212547196626 0 0.7742275032520141 1.6989700043360187 0.75 0.8494850021680094 + + [{I|L}T]WPEVQK{I|L};[{I|L}T]WPEVKQ{I|L};[{I|L}T]WPEV[AG]K{I|L};[{I|L}T]WPEVK[AG]{I|L};[{I|L}T]W{I|L}[DP]QK{I|L};[{I|L}T]W{I|L}[DP]KQ{I|L};[{I|L}T]W{I|L}[DP][AG]K{I|L};{[QN]|[E{I|L}]|[KN]}KWRW[VP];{[QN]|[E{I|L}]|[KN]}K[QT]{I|L}W[VP];[{I|L}T]W{I|L}[DP]K[AG]{I|L} 6.588;6.3839;5.7604;5.3316;5.3062;5.102;4.4786;4.0735;4.0508;4.0497 +;-;-;-;-;-;-;-;-;- + 1109 + 1 1.499 84330.7 1.0 3714 5716 9430 SUDHL4_400M_050219_2,9432 SUDHL4_400M_050219_2,9432,TLWPEVQKL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9433 53.323 375.0 221080.0 25 0 14817.0 + 43314 WLDETLAQV 9 121 537.7773801881118 1073.5402074430235 2 537.7773925662041 MULTI CID FTMS 0 0 0 9430 218351.390625 0.3644470909877845 -2 0.1241455078125 3 Unmodified _WLDETLAQV_ ENSG00000145332|ENST00000273963|KLHL8;nc|ENSG00000145332|Q9P2G9-2|KLHL8 74.42276476219924 0.019389277360085 6 {NN|[MP]|[D{I|L}]|[EV]}WET{I|L}AQV 9 2 + 59.447 0.0 0.0 5.5375 5.5375 80.005 0.0 0.0 0.0 2.6278813061184536 8.824995917031941 2.6278813061184536 2.6278813061184536 0 0.9489700043360187 0.0 1.1861818737241734 0.8252574989159953 {NN|[MP]|[D{I|L}]|[EV]}WET{I|L}AQV;[W{I|L}]DET{I|L}AQV;{NN|[MP]|[D{I|L}]|[EV]}ETW{I|L}AQV;{NN|[MP]|[D{I|L}]|[EV]}AP{M(Oxidation (M))|F}T{I|L}AQV;{NN|[MP]|[D{I|L}]|[EV]}EWT{I|L}AQV;{[QN]|[E{I|L}]|[KN]}DTW{I|L}AQV;[AG]A{[QS]|[NT]}ET{I|L}AQV;{NN|[MP]|[D{I|L}]|[EV]}ET{I|L}WAQV;{[QN]|[E{I|L}]|[KN]}GP{M(Oxidation (M))|F}T{I|L}AQV;{[QN]|[E{I|L}]|[KN]}DWT{I|L}AQV 5.5375;5.2927;5.2558;4.9541;4.9541;4.9;4.6748;4.6748;4.5983;4.5983 -;+;-;-;-;-;-;-;-;- + 1701 1 1.499 68893.6 1.0 3715 5716 9430 SUDHL4_400M_050219_2,9433 SUDHL4_400M_050219_2,9433,WLDETLAQV True True DPNLFGIAQV 53.322614 537.777392566204 0.0 9430.0 ENSG00000214954|ENST00000448384|LRRC69;;nc|ENSG00000214954|Q6ZNQ3-2|LRRC69 2.2400023142496743 2.0 False 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9434 53.329 353.0 122670.0 25 0 31222.0 + 23494 LTIRQFYKKV 10 52 648.3928123004272 1294.7710716676545 2 648.3927490115166 MULTI CID FTMS 0 0 0 9430 174519.4375 1.0 0 0.0 4 Unmodified _LTIRQFYKKV_ REV__ENSG00000137080|ENST00000380225|IFNA21;REV__ENSG00000228083|ENST00000380222|IFNA14 1.4819007175156935 0.719781833666733 6 M 1 -1 4.6041 0.0 0.0 0.35559 0.0 0.0 701.4123203022231 459.2963045709594 1160.7086248731823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.35559 - 2 + 1 1.499 46918.4 1.0 3716 5716 9430 SUDHL4_400M_050219_2,9434 SUDHL4_400M_050219_2,9434,LTIRQFYKKV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9435 53.337 458.0 403610.0 25 0 55253.0 + 11783 GLLENIRQL 9 131 528.3124108864913 1054.6102688397823 2 528.3119384646416 MULTI CID FTMS 0 0 0 9430 164727.5 0.4965413039474868 -1 0.0786705017089843 5 Unmodified _GLLENIRQL_ ENSG00000131437|ENST00000403231|KIF3A;ENST00000487055.1_1_5:132036305-132039285:-|nuORF;nc|ENSG00000131437|Q9Y496|KIF3A 99.79894945604345 0.0109923542231827 6 {I|L}EN{I|L}RQ{I|L} 7 2 66.878 0.0 0.0 6.3415 0.0 0.0 170.10107793610433 0.0 170.10107793610433 0.0 38.23268251561565 0.0 0.0 0 1.1989700043360187 0.0 0.3054621874040891 1.9674165578762484 + {I|L}EN{I|L}RQ{I|L} 6.3415 + + 2559 + 1 1.499 140741.0 1.0 3717 5716 9430 SUDHL4_400M_050219_2,9435 SUDHL4_400M_050219_2,9435,GLLENIRQL True True GLLENIRQL 53.337139 528.311938464642 1360650.125 9430.0 ENST00000487055.1_1_5:132036305-132039285:-|nuORF;;ENSG00000131437|ENST00000403231|KIF3A;;nc|ENSG00000131437|Q9Y496|KIF3A 5.3265377680460615 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9436 53.349 679.0 147210.0 25 0 27885.0 + 37834 TLTNIIHNL 9 117 519.8008965251578 1037.5872401171157 2 519.8008300662041 MULTI CID FTMS 0 0 0 9430 151236.6875 1.0 0 0.0 6 Unmodified _TLTNIIHNL_ ENSG00000128699|ENST00000392349|ORMDL1 78.14939416004806 0.0179651292570206 6 [{I|L}T]TN{I|L}{I|L}HN{I|L} 9 0 + 77.036 0.0 0.0 7.4245 7.4245 92.038 0.0 0.0 0.0 40.26052638221479 17.210536658395128 17.210536658395128 9.208187539523747 0 0.75 2.0 0.0 1.3494850021680094 + + [{I|L}T]TN{I|L}{I|L}HN{I|L};[{I|L}T]TGG{I|L}{I|L}HN{I|L};[{I|L}T]TN{I|L}{I|L}HGG{I|L};[{I|L}T]W[RV]HN{I|L};[{I|L}T]TGG{I|L}{I|L}HGG{I|L};[{I|L}T]N{I|L}H{[TV]|[{I|L}S]}[Q{I|L}];[{I|L}T]W[VP]{I|L}N[VP];[{I|L}T]W[VP][VP]N{I|L};[{I|L}T]W[RV]HGG{I|L};[{I|L}T]GG{I|L}H{[TV]|[{I|L}S]}[Q{I|L}] 7.4245;6.5371;5.9593;4.7766;4.3532;3.9124;3.6468;3.5705;3.3062;3.0249 +;-;-;-;-;-;-;-;-;- + 878 + 1 1.499 79431.6 1.0 3718 5716 9430 SUDHL4_400M_050219_2,9436 SUDHL4_400M_050219_2,9436,TLTNIIHNL True True TLTNIIHNL 53.348949 519.800830066204 786453.25 9430.0 ENSG00000128699|ENST00000392349|ORMDL1 5.898322900136312 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9437 53.354 291.0 237010.0 25 0 25790.0 + + 20501 FLASESLIKQI 11 86 624.8304586077347 1247.6463642822694 2 624.8314086794853 MULTI CID FTMS 0 0 0 9430 120570.921875 0.1984923199950118 2 -0.1190071105957031 7 Unmodified _LLLFWHYAW_ ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENSG00000198755|ENST00000322203|RPL10A 19.256988751693697 0.3154191944385105 6 {I|L}{I|L}{I|L}DV 5 -1 35.49 0.0 0.0 2.8445 0.0 0.0 0.0 691.2826242075429 691.2826242075429 5.576413478795775 0.0 0.0 0.0 0 0.2302046884880938 1.6989700043360187 0.0 0.0 {I|L}{I|L}{I|L}DV 2.8445 - 308 + 1 1.499 59811.3 1.0 3719 5716 9430 SUDHL4_400M_050219_2,9437 SUDHL4_400M_050219_2,9437,LLLFWHYAW False False FLASESLIKQI 53.354303 624.831408679485 1565789.5 9430.0 ENST00000478340.2_1_6:35437033-35438524:+|nuORF;;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;;ENSG00000198755|ENST00000322203|RPL10A 4.764823277791341 2.0 False 11.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9438 53.368 800.0 67661.0 25 0 2854.5 -1 0 83 1164.5378885458315 3490.5918362376947 3 1165.535327136517 MULTI CID FTMS 0 0 0 9430 149933.375 0.2292863826521298 -16 0.5705604553222656 8 6 {M(Oxidation (M))|F}WQQA 5 -1 24.949 0.0 0.0 0.71474 0.0 0.0 2250.076783345339 577.2022188775999 2827.279002222939 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}WQQA 0.71474 - 553 + 1 1.499 37902.3 0.5600000023841858 3720 5716 9430 SUDHL4_400M_050219_2,9438 SUDHL4_400M_050219_2,9438, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9440 53.375 250.0 201670.0 25 0 19279.0 + 44340 YLPPGFLSA 9 72 482.7608035732731 963.5070542133462 2 482.7608215212822 MULTI CID FTMS 0 0 0 9439 193670.53125 0.8280836341545882 1 -0.0507850646972656 1 Unmodified _YLPPGFLSA_ ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-4|SREBF1 46.92087301778293 0.0471210510596396 6 [Y{I|L}]P 3 6 31.695 0.0 0.0 3.2895 0.0 0.0 0.0 587.2855318658811 587.2855318658811 0.8040747723590158 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 + [Y{I|L}]P 3.2895 + + 113 + 1 1.499 48872.5 1.0 3721 5717 9439 SUDHL4_400M_050219_2,9440 SUDHL4_400M_050219_2,9440,YLPPGFLSA True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9441 53.389 800.0 115930.0 25 0 9881.8 + 31312 RMDYPVFTV 9 107 564.2813791801357 1126.5482054270713 2 564.2815429568291 MULTI CID FTMS 0 0 0 9439 92612.046875 0.2095072398975674 5 -0.3135108947753906 2 Unmodified _RMDYPVFTV_ ENSG00000091490|ENST00000399878|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;nc|ENSG00000091490|Q68CR1-3|SEL1L3 29.84058131909904 0.1515068451768857 6 {NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}YPV{M(Oxidation (M))|F}TV 10 3 + 46.826 0.0 0.0 4.1566 4.1566 75.94 0.0 0.0 0.0 1.2751372576825304 28.84311564696993 1.2751372576825304 3.0102999566398125 0 1.0682503180159344 1.3010299956639813 0.0 0.0 {NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}YPV{M(Oxidation (M))|F}TV;{NN|[MP]|[D{I|L}]|[EV]}{[CA]|SS}YVP{M(Oxidation (M))|F}TV;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}PC{I|L}TVMV;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[WM]P{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}T]V[WM]P{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}T][WM]PV{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}T][WM]VP{M(Oxidation (M))|F}TV;{[ES]|[DT]|[{I|L}C]}[VS]YPV{M(Oxidation (M))|F}TV;{[QN]|[E{I|L}]|[KN]}[YC(Carbamidomethyl (C))]PV{M(Oxidation (M))|F}TV;[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}{[VA]|[{I|L}G]}[WE]MV 4.1566;3.8894;3.8872;3.7167;3.2667;3.2237;2.9565;2.6079;2.5782;2.5166 -;-;-;-;-;-;-;-;-;- 380 1 1.499 77371.0 0.6600000262260437 3722 5717 9439 SUDHL4_400M_050219_2,9441 SUDHL4_400M_050219_2,9441,RMDYPVFTV False True RMDYPVFTV 53.389184 564.281542956829 6526883.0 9439.0 ENSG00000091490|ENST00000399878|SEL1L3;;nc|ENSG00000091490|Q68CR1-2|SEL1L3;;nc|ENSG00000091490|Q68CR1-3|SEL1L3 6.475860595703125 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9442 53.394 274.0 208300.0 25 0 24970.0 + 9444 FLASESLIKQI 11 88 624.8633040582995 1247.712055183399 2 624.8638183474541 MULTI CID FTMS 0 0 0 9439 145074.140625 1.0 0 0.0 3 Unmodified _FLASESLIKQI_ ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENST00000478340.2_1_6:35437033-35438524:+|nuORF 70.33199760932243 0.0314424197347918 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{[ES]|[DT]|[{I|L}C]}S{I|L}{I|L}KQ{I|L} 11 0 + 43.338 0.0 0.0 3.4734 3.4734 82.016 0.0 0.0 0.0 23.025111912784443 11.937030003500976 11.937030003500976 11.575773191777934 0 1.25 0.0 0.3807196863200844 0.7302046884880937 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{[ES]|[DT]|[{I|L}C]}S{I|L}{I|L}KQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WT]|[RM]}S{I|L}{I|L}KQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{[ES]|[DT]|[{I|L}C]}S{I|L}{I|L}K[AG]{I|L};{I|L}{I|L}S[KQ]{[ES]|[DT]|[{I|L}C]}A{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{[CA]|SS}A{I|L}[KG]A{I|L}{M(Oxidation (M))|F}{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}A{[ES]|[DT]|[{I|L}C]}S{I|L}GRR{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{[WT]|[RM]}S{I|L}{I|L}K[AG]{I|L};{[ES]|[DT]|[{I|L}C]}{[TV]|[{I|L}S]}A{I|L}[KG]A{I|L}{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{[CA]|SS}A{I|L}[KQ]{I|L}{M(Oxidation (M))|F}{I|L};[KQ]C(Carbamidomethyl (C))A{I|L}[KG]A{I|L}{M(Oxidation (M))|F}{I|L} 3.4734;2.5456;2.497;1.7768;1.6478;1.5822;1.5663;1.3064;1.1179;0.97086 +;-;-;-;-;-;-;-;-;- + 339 + 1 1.499 49615.4 1.0 3723 5717 9439 SUDHL4_400M_050219_2,9442 SUDHL4_400M_050219_2,9442,FLASESLIKQI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9443 53.4 338.0 137440.0 25 0 15701.0 + 20475 LLLAQLSDA 9 86 472.2759809727202 942.5374090122403 2 472.2758361697197 MULTI CID FTMS 0 0 0 9439 169591.1875 1.0 0 0.0 4 Unmodified _LLLAQLSDA_ ENSG00000175348|ENST00000534025|TMEM9B 38.15118350030904 0.0856056900103839 6 {I|L}{I|L}{I|L}AQ 5 4 28.416 0.0 0.0 3.0149 0.0 0.0 0.0 401.1652526003842 401.1652526003842 3.4716899430773296 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 + {I|L}{I|L}{I|L}AQ 3.0149 + + 108 1 1.499 41042.6 1.0 3724 5717 9439 SUDHL4_400M_050219_2,9443 SUDHL4_400M_050219_2,9443,LLLAQLSDA True True LLLAQLSDA 53.400374 472.27583616972 890939.0625 9439.0 ENSG00000175348|ENST00000534025|TMEM9B 4.180454651514689 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9444 53.407 375.0 268590.0 25 0 15840.0 + 9735 FMATIAEGL 9 98 952.4803011623592 951.473024695759 1 952.4824096560478 MULTI CID FTMS 0 0 0 9439 129516.8203125 0.3205744847496286 -3 0.1923675537109375 5 Unmodified _FMATIAEGL_ ENSG00000140632|ENST00000321919|GLYR1;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-5|GLYR1 117.59872219059416 0.0024691254995583 6 {[YD]|[{M(Oxidation (M))|F}M]}AT{I|L}AEG{I|L} 9 0 + 50.322 0.0 0.0 5.2889 5.2889 82.673 0.0 0.0 0.0 6.478174818886373 7.1919646325935815 6.478174818886373 6.478174818886373 0 1.2451752218011642 0.0 2.0 0.0 + + {[YD]|[{M(Oxidation (M))|F}M]}AT{I|L}AEG{I|L};[WY]T{I|L}AEG{I|L};{[YD]|[{M(Oxidation (M))|F}M]}ATA{I|L}EG{I|L};{[YD]|[{M(Oxidation (M))|F}M]}ATAE{I|L}G{I|L};[WY]TA{I|L}EG{I|L};{[YD]|[{M(Oxidation (M))|F}M]}A[VP]A{M(Oxidation (M))|F}G{I|L};{[YD]|[{M(Oxidation (M))|F}M]}[PG]{I|L}A{M(Oxidation (M))|F}G{I|L};[WY]TAE{I|L}G{I|L};{[QN]|[E{I|L}]|[KN]}[R{M(Oxidation (M))|F}]A{M(Oxidation (M))|F}G{I|L};{[QN]|[E{I|L}]|[KN]}G[{M(Oxidation (M))|F}V]A{M(Oxidation (M))|F}G{I|L} 5.2889;4.608;4.4857;3.9938;3.8049;3.6463;3.3945;3.3129;3.2313;3.0239 +;-;-;-;-;-;-;-;-;- + 1977 1 1.499 72886.9 1.0 3725 5717 9439 SUDHL4_400M_050219_2,9444 SUDHL4_400M_050219_2,9444,FMATIAEGL True True FMATIAEGL 53.407142 952.482409656048 2492927.25 9439.0 nc|ENSG00000140632|Q49A26-5|GLYR1;;nc|ENSG00000140632|Q49A26-3|GLYR1;;nc|ENSG00000140632|Q49A26-4|GLYR1;;ENSG00000140632|ENST00000321919|GLYR1;;nc|ENSG00000140632|Q49A26-2|GLYR1 2.6306165854136148 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9445 53.419 677.0 136490.0 25 0 4203.5 + 43596 YAFGDELYV 9 115 1076.491678307808 1075.484401841208 1 1077.497607409954 MULTI CID FTMS 0 0 0 9439 121002.65625 1.0 0 0.0 6 Unmodified _YAFGDELYV_ REV__ENSG00000146143|ENST00000615550|PRIM2;REV__ENST00000419977.4_1_6:57182469-57246993:+|nuORF;REV__ENST00000490313.1_1_6:57244770-57299810:+|nuORF 44.40701690623563 0.0526327925666318 6 [Y{I|L}]EDY{I|L}Y 7 -1 46.692 0.0 0.0 4.3415 0.0 0.0 0.0 113.05715098957242 113.05715098957242 7.276545189923183 0.0 0.0 0.0 0 0.0 1.3979400086720375 1.6549471895720984 0.0 [Y{I|L}]EDY{I|L}Y 4.3415 - 5210 1 1.499 63431.9 1.0 3726 5717 9439 SUDHL4_400M_050219_2,9445 SUDHL4_400M_050219_2,9445,YAFGDELYV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9447 53.431 465.0 154400.0 25 0 18634.0 + 33892 SLFPHNPQFI 10 99 600.3145873579687 1198.6146217827372 2 600.3144409060478 MULTI CID FTMS 0 0 0 9446 112710.0390625 0.4526445672367182 2 -0.1472930908203125 1 Unmodified _SLFPHNPQFI_ ENSG00000117133|ENST00000370654|RPF1;WARS2-RPF1|1|fusion 21.799462835604743 0.4789045305445478 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}RE[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}{I|L} 9 5 + 55.594 0.0 0.0 4.6382 4.6382 77.054 0.0 0.0 0.0 2.99660827770127 1.605283153034378 1.605283153034378 2.99660827770127 0 2.0682503180159344 2.0 0.5 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}RE[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}R{[TV]|[{I|L}S]}{[C(Carbamidomethyl (C))G]|[NC]}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}R{[C(Carbamidomethyl (C))G]|[NC]}{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{[RE]|[WV]}{M(Oxidation (M))|F}[C(Carbamidomethyl (C))K]{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}H{I|L}[MN][QP]{M(Oxidation (M))|F}{I|L};[HN]P{M(Oxidation (M))|F}QP{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N{M(Oxidation (M))|F}QP{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[VG][MN]{I|L}[YR];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}[VG][{I|L}T]C(Carbamidomethyl (C))[R{M(Oxidation (M))|F}];{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}N[QP]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L} 4.6382;4.3882;4.1413;3.3022;2.7622;2.3648;2.3648;2.3406;2.2657;1.8859 -;-;-;-;-;-;-;-;-;- 606 1 1.499 56139.2 1.0 3727 5718 9446 SUDHL4_400M_050219_2,9447 SUDHL4_400M_050219_2,9447,SLFPHNPQFI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9448 53.443 674.0 370550.0 25 0 35400.0 + 9210 FGGVLILIHR 10 126 562.8504048849444 1123.6862568366887 2 562.8506957888603 MULTI CID FTMS 0 0 0 9446 179997.40625 0.0401633436041408 -2 0.1190071105957031 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 64.23631603340823 0.0254735623525308 6 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 127.78 0.0 0.0 11.371 11.371 94.688 0.0 0.0 0.0 94.85526832919756 24.86707834521677 24.86707834521677 9.208187539523747 0 2.0356668758921828 2.0 0.0 1.8829131673969608 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;{I|L}VN{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HR;{I|L}VGG{M(Oxidation (M))|F}{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}[RH]{I|L};{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}[RH]{I|L};{I|L}VN{M(Oxidation (M))|F}{I|L}{I|L}[RH]{I|L};{I|L}VGG{M(Oxidation (M))|F}{I|L}{I|L}[RH]{I|L};{I|L}VN[VP]KN[KG]R;{I|L}VN[VP]K[W{I|L}]R 11.371;10.552;10.269;9.4498;8.9891;8.1696;7.8869;7.0674;5.8876;5.2859 -;-;-;-;-;-;-;-;-;- 1797 + 1 1.499 188569.0 1.0 3728 5718 9446 SUDHL4_400M_050219_2,9448 SUDHL4_400M_050219_2,9448,FGGVLILIHR True False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9449 53.451 460.0 251640.0 25 0 31220.0 + 17920 KQVEEIFNL 9 132 560.3061414648447 1118.5977299964893 2 560.3054687380791 MULTI CID FTMS 0 0 0 9446 156538.375 0.3275752082434024 -2 0.1190071105957031 3 Unmodified _KQVEEIFNL_ ENSG00000263001|ENST00000573035|GTF2I;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I 92.65332237495696 0.0139087009896299 6 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L}{M(Oxidation (M))|F}N{I|L} 9 2 + 88.399 0.0 0.0 7.9027 7.9027 87.148 0.0 0.0 0.0 3.4406074087512337 13.46787486224656 3.4406074087512337 3.4406074087512337 0 1.0941876774005248 1.3010299956639813 1.6237125054200234 0.5356668758921829 {[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}EQK{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKE{I|L}{M(Oxidation (M))|F}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KEE{I|L}{M(Oxidation (M))|F}GG{I|L};{NN|[MP]|[D{I|L}]|[EV]}E[AG]K{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}EQK{I|L}{M(Oxidation (M))|F}GG{I|L};[KA]GVEE{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKE{I|L}{M(Oxidation (M))|F}GG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}KEE{M(Oxidation (M))|F}{I|L}N{I|L};[KQ]VEE{I|L}{M(Oxidation (M))|F}N{I|L} 7.9027;7.5951;7.4916;7.0795;6.7719;6.7719;6.7584;6.6684;6.64;6.5656 -;-;-;-;-;-;-;-;-;+ + 5268 1 1.499 88513.2 1.0 3729 5718 9446 SUDHL4_400M_050219_2,9449 SUDHL4_400M_050219_2,9449,KQVEEIFNL True True KQVEEIFNL 53.450994 560.305468738079 2658665.0 9446.0 nc|ENSG00000263001|P78347-2|GTF2I;;nc|ENSG00000263001|P78347-3|GTF2I;;nc|ENSG00000263001|P78347-4|GTF2I;;ENST00000544802.5_1_7:72593260-72619478:+|nuORF;;ENSG00000263001|ENST00000573035|GTF2I 4.127021710077922 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9450 53.462 617.0 136830.0 25 0 26863.0 + 11756 GLISVDVRI 9 95 486.29769608906815 970.5808392449364 2 486.2982360720634 MULTI CID FTMS 0 0 0 9446 123732.578125 1.0 0 0.0 4 Unmodified _GLISVDVRI_ ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1 45.69961567697781 0.0497987121815769 6 {[VA]|[{I|L}G]}{I|L}SVDVR{I|L} 9 0 + 74.984 0.0 0.0 7.7257 7.7257 83.113 0.0 0.0 0.0 23.557070101506127 0.7974483110184423 0.7974483110184423 0.7974483110184423 0 1.2302046884880935 2.0 0.0 0.3252574989159953 + + {[VA]|[{I|L}G]}{I|L}SVDVR{I|L};{[VA]|[{I|L}G]}{I|L}SVD{I|L}[RV];{[VA]|[{I|L}G]}{I|L}SV{I|L}D[RV];{[VA]|[{I|L}G]}{I|L}S{I|L}VD[RV];{[VA]|[{I|L}G]}{I|L}{I|L}SVD[RV];{[VA]|[{I|L}G]}{I|L}S{I|L}{[CP]|[EA]}R{I|L};{[VA]|[{I|L}G]}{I|L}{I|L}S{[CP]|[EA]}R{I|L} 7.7257;7.6435;7.1519;6.1687;5.7561;5.1207;4.7081 +;-;-;-;-;-;- + 227 + 1 1.499 70930.4 1.0 3730 5718 9446 SUDHL4_400M_050219_2,9450 SUDHL4_400M_050219_2,9450,GLISVDVRI True True GLISVDVRI 53.461752 486.298236072063 543021.375 9446.0 ENSG00000077235|ENST00000356183|GTF3C1;;nc|ENSG00000077235|Q12789-3|GTF3C1 3.875630219777425 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9451 53.476 800.0 63744.0 25 0 7204.7 + 17348 KLYDGFQYL 9 87 573.7954504949083 1145.5763480566166 2 573.7950317263603 MULTI CID FTMS 0 0 0 9446 86177.90625 0.5640751129784344 2 -0.1472930908203125 5 Unmodified _KLYDGFQYL_ ENSG00000143393|ENST00000368873|PI4KB;nc|ENSG00000143393|Q9UBF8-2|PI4KB;nc|ENSG00000143393|Q9UBF8-3|PI4KB 24.99096001346401 0.2132109383330889 6 DG{M(Oxidation (M))|F}QY{I|L} 6 3 40.904 0.0 0.0 3.5706 0.0 0.0 404.24324233222814 0.0 404.24324233222814 0.0 23.156753288559813 0.0 0.0 0 0.5 0.0 0.3252574989159953 0.0 + DG{M(Oxidation (M))|F}QY{I|L} 3.5706 + + 340 1 1.499 42594.3 0.4000000059604645 3731 5718 9446 SUDHL4_400M_050219_2,9451 SUDHL4_400M_050219_2,9451,KLYDGFQYL False True KLYDGFQYL 53.475586 573.79503172636 845047.5625 9446.0 nc|ENSG00000143393|Q9UBF8-2|PI4KB;;ENSG00000143393|ENST00000368873|PI4KB;;nc|ENSG00000143393|Q9UBF8-3|PI4KB 5.39240566889445 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9452 53.489 800.0 182820.0 25 0 4912.3 -1 0 145 1052.519308178798 3154.5360951365938 3 1052.523364245892 MULTI CID FTMS 0 0 0 9446 136980.46875 0.830166892261586 -1 0.0507850646972656 6 6 MNMVNA[PG]DQYYNR 14 -1 106.24 0.0 0.0 3.3678 0.0 0.0 0.0 1497.715986431439 1497.715986431439 80.0445434849141 0.0 0.0 0.0 0 0.9247425010840048 2.0 1.3494850021680094 0.7614393726401688 MNMVNA[PG]DQYYNR 3.3678 - 10050 + 1 1.499 96135.6 0.5299999713897705 3732 5718 9446 SUDHL4_400M_050219_2,9452 SUDHL4_400M_050219_2,9452, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9453 53.503 800.0 127140.0 25 0 5150.3 -1 0 120 1058.1793152599712 3171.516116380114 3 1058.515307605267 MULTI CID FTMS 0 0 0 9446 123665.1875 0.8851010702529792 -1 0.0507850646972656 7 6 {M(Oxidation (M))|F}NVN 4 -1 22.907 0.0 0.0 0.72228 0.0 0.0 2679.289301734329 0.0 2679.289301734329 0.0 6.709412807357751 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}NVN 0.72228 - 1665 1 1.499 73856.2 0.5099999904632568 3733 5718 9446 SUDHL4_400M_050219_2,9453 SUDHL4_400M_050219_2,9453, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9455 53.508 22.0 1661100.0 25 0 114010.0 + 20247 LLDLKPELAAQ 11 69 605.855554337379 1209.696555741558 2 605.8560058474541 MULTI CID FTMS 0 0 0 9454 2291110.0 0.0530840170980252 6 -0.2735481262207031 1 Unmodified _LLDLKPELAAQ_ REV__ENSG00000108465|ENST00000338399|CDK5RAP3;REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF;REV__nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-3|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 13.042465956692816 0.7638483625850725 6 {I|L}{I|L}DV 4 -1 18.161 0.0 0.0 1.5013 0.0 0.0 0.0 766.4105809703266 766.4105809703266 2.243012119929091 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.0 {I|L}{I|L}DV 1.5013 - 163 1 1.499 32821.9 1.0 3734 5719 9454 SUDHL4_400M_050219_2,9455 SUDHL4_400M_050219_2,9455,LLDLKPELAAQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9456 53.509 11.0 6072500.0 25 0 880040.0 + 9207 FGGVLILIHR 10 72 375.5693376546222 1123.6861835640666 3 375.5693237185478 MULTI CID FTMS 0 0 0 9454 5984731.5 0.5138737541436955 -1 0.0843544006347656 2 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 46.020951573049366 0.1035046897853725 6 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 98.51 0.0 0.0 8.7667 8.7667 93.857 0.0 0.0 0.0 81.47675526254974 25.017346757967545 25.017346757967545 9.208187539523747 0 1.0044321917401078 2.0 0.0 1.385151878060192 [{I|L}V]{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;[{I|L}V]{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 8.7667;7.9472 -;- 164 + 1 1.499 58077.7 1.0 3735 5719 9454 SUDHL4_400M_050219_2,9456 SUDHL4_400M_050219_2,9456,FGGVLILIHR True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9457 53.511 69.0 948240.0 25 0 100120.0 + 15089 IMLEALERV 9 79 537.3044657716225 1072.594378610045 2 537.3047363162041 MULTI CID FTMS 0 0 0 9454 518890.6875 0.3138221038539077 -2 0.1351394653320312 3 Unmodified _IMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 41.95555342248728 0.0647214845423414 6 {I|L}M{I|L}EA{I|L}ERV 9 0 + 93.906 0.0 0.0 8.755 8.755 97.531 0.0 0.0 0.0 62.10068688737465 14.09256854528806 14.09256854528806 22.730012720637376 0 0.8494850021680094 2.0 0.3807196863200844 0.0 + + {I|L}M{I|L}EA{I|L}ERV;{I|L}M{I|L}V[DV]ERV;{I|L}MV[DV]{I|L}ERV;{I|L}MV{I|L}[DV]ERV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{I|L}[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}V[EP];{[QN]|[E{I|L}]|[KN]}A[R{M(Oxidation (M))|F}]V{I|L}[EP];{[QN]|[E{I|L}]|[KN]}A[R{M(Oxidation (M))|F}]{I|L}V[EP];[KA]{[SA]|[TG]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{I|L}[EP];[KA]{[SA]|[TG]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}V[EP] 8.755;6.6359;6.2559;5.6043;3.4441;3.2746;2.5783;1.5466;0.40804;0.23859 +;-;-;-;-;-;-;-;-;- + 298 + 1 1.499 56515.2 1.0 3736 5719 9454 SUDHL4_400M_050219_2,9457 SUDHL4_400M_050219_2,9457,IMLEALERV True True IMLEALERV 53.510917 537.304736316204 31151547.0 9454.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 5.9376600583394366 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9458 53.515 200.0 415620.0 25 0 50746.0 + -1 IMLEALERV 9 85 545.3020767276422 1088.5896005220843 2 545.3023559451103 MULTI CID FTMS 0 0 0 9454 271841.5625 0.2113023343666883 -2 0.1351394653320312 4 Oxidation (M) _IM(Oxidation (M))LEALERV_ nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG 34.93206674587334 0.1032771302489716 6 {I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}ERV 9 -1 + 62.826 0.0 0.0 5.7714 5.7714 89.81 0.0 0.0 0.0 42.68022427997375 7.573166222047135 7.573166222047135 13.456837818197798 0 1.0 0.0 0.3807196863200844 0.0 {I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}ERV;{I|L}{M(Oxidation (M))|F}{I|L}EV[DV]RV;{I|L}{M(Oxidation (M))|F}{I|L}V[DV]ERV;{I|L}{M(Oxidation (M))|F}{I|L}VE[DV]RV;{I|L}{M(Oxidation (M))|F}{I|L}VA[TA]QQV;{I|L}{M(Oxidation (M))|F}V{I|L}A[TA]QQV;{I|L}{M(Oxidation (M))|F}{I|L}VNEQQV;{I|L}{M(Oxidation (M))|F}V{I|L}NEQQV;{I|L}{M(Oxidation (M))|F}V{I|L}[DV]ERV;{I|L}{M(Oxidation (M))|F}V[DV]{I|L}ERV 5.7714;4.5352;4.3254;4.2587;3.8721;3.7051;3.6113;3.4443;3.2398;3.2398 +;-;-;-;-;-;-;-;-;- + 399 + 1 1.499 68817.1 1.0 3737 5719 9454 SUDHL4_400M_050219_2,9458 SUDHL4_400M_050219_2,9458,IMLEALERV False False IMLEALERV 53.514752 545.30235594511 11738323.0 9454.0 nc|ENSG00000224543|A8MWD9|SNRPGP15;;ENSG00000143977|ENST00000272348|SNRPG 5.926011403401692 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9459 53.52 294.0 247620.0 25 0 24711.0 + 1786 ALSEELVQL 9 115 501.2792939969273 1000.5440350606548 2 501.2795593142509 MULTI CID FTMS 0 0 0 9454 148920.09375 0.516053064599181 -1 0.0843544006347656 5 Unmodified _ALSEELVQL_ ENSG00000170759|ENST00000302418|KIF5B 44.40701690623563 0.0526327925666318 6 {[ES]|[DT]|[{I|L}C]}E{I|L}A{I|L} 6 4 40.38 0.0 0.0 4.0358 0.0 0.0 0.0 355.20032103161094 355.20032103161094 15.45880017344075 0.0 0.0 0.0 0 0.0 0.0 1.798455006504028 0.0 {[ES]|[DT]|[{I|L}C]}E{I|L}A{I|L} 4.0358 - 746 1 1.499 60180.4 1.0 3738 5719 9454 SUDHL4_400M_050219_2,9459 SUDHL4_400M_050219_2,9459,ALSEELVQL True True ALSEELVQL 53.520131 501.279559314251 1470559.625 9454.0 ENSG00000170759|ENST00000302418|KIF5B 1.7793169021606443 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9460 53.525 250.0 203590.0 25 0 12948.0 + 17330 KLVGEFLEV 9 92 517.2986847736828 1032.5828166141655 2 517.3006469607353 MULTI CID FTMS 0 0 0 9454 119176.59375 1.0 0 0.0 6 Unmodified _KLVGEFLEV_ ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1 19.361941925380144 0.3125782356748823 6 {[QN]|[E{I|L}]|[KN]}[RK]{M(Oxidation (M))|F}{I|L}EV 8 4 + 38.733 0.0 0.0 3.751 3.751 75.921 0.0 0.0 0.0 5.220130036694741 16.409780573583316 5.220130036694741 3.979400086720375 0 0.2134679910804404 0.721246399047171 0.0 0.0 {[QN]|[E{I|L}]|[KN]}[RK]{M(Oxidation (M))|F}{I|L}EV;{[QN]|[E{I|L}]|[KN]}{M(Oxidation (M))|F}[RK]{I|L}EV;{[TV]|[{I|L}S]}[MT][K{I|L}]{I|L}EV;{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV[K{I|L}]{I|L}EV;[K{I|L}]V{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}EV;[K{I|L}]V[W{M(Oxidation (M))|F}]{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[RK]{I|L}EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[DG][K{I|L}]{I|L}EV 3.751;3.3657;3.2455;2.7558;2.7115;2.3756;2.0841;1.402 -;-;-;-;+;-;-;- + 210 1 1.499 43310.7 1.0 3739 5719 9454 SUDHL4_400M_050219_2,9460 SUDHL4_400M_050219_2,9460,KLVGEFLEV False True KLVGEFLEV 53.524787 517.300646960735 695232.125 9454.0 nc|ENSG00000065427|Q15046-2|KARS1;;ENSG00000065427|ENST00000302445|KARS1 4.222760677337647 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9461 53.539 800.0 358180.0 25 0 50337.0 2918 AVGFLLRH 8 136 456.7741518746007 911.5337508160012 2 456.7737914919853 MULTI CID FTMS 0 0 0 9454 100262.6875 0.4960762673314814 -2 0.1351394653320312 7 Unmodified _AVGFLLRH_ ENST00000396437.3_1_22:42341142-42343146:-|nuORF;nc|ENSG00000100162|Q9NSP4-2|CENPM 42.96799951952854 0.1846367511955703 6 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 7 6 + 92.77 0.0 0.0 10.177 10.177 95.495 0.0 0.0 0.0 16.320232147054057 15.41392685158226 15.41392685158226 9.33053210369387 0 1.2134679910804405 0.0 0.0 2.0158715643802765 {M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}RH;{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}RH;{M(Oxidation (M))|F}N{I|L}{I|L}[RH]{I|L};{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}{[HG]|PP}V;{M(Oxidation (M))|F}GG{I|L}{I|L}[RH]{I|L};{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}{[HG]|PP}V;{M(Oxidation (M))|F}N{I|L}[RH]{I|L}{I|L};{M(Oxidation (M))|F}GG{I|L}[RH]{I|L}{I|L} 10.177;9.1538;8.4864;7.4628;6.0947;6.0697;5.0711;4.6359;4.5409;3.5173 -;-;-;-;-;-;-;-;-;- 290 + 1 1.499 219781.0 0.4099999964237213 3740 5719 9454 SUDHL4_400M_050219_2,9461 SUDHL4_400M_050219_2,9461,AVGFLLRH False False False False non_canonical_ambiguous PXD020620_cell_line SUDHL4_400M_050219_2 9462 53.552 800.0 165670.0 25 0 11580.0 + 44320 YLNLDVPQV 9 127 530.7873427721083 1059.5601326110166 2 530.7874023318291 MULTI CID FTMS 0 0 0 9454 103919.1875 0.5394857661626037 -1 0.0843544006347656 8 Unmodified _YLNLDVPQV_ chr7:102289517-102300522|27|12.96|0.03|8.86|+|0|None,SH2B2|1 92.4914307365334 0.0139747738690111 6 [Y{I|L}]N{I|L}DVPQV 9 0 + 73.471 0.0 0.0 6.9341 6.9341 83.739 0.0 0.0 0.0 2.2860504252900284 9.577570906191896 2.2860504252900284 2.2860504252900284 0 1.3226825097560422 1.6989700043360187 0.566901560044258 0.7742275032520141 + + [Y{I|L}]N{I|L}DVPQV;{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}YVPQV;{[QV]|[N{I|L}]|[RA]|[KV]}Y{I|L}DVPQV;{[QV]|[N{I|L}]|[RA]|[KV]}DVY{I|L}PQV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}DYVPQV;{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}YDVPQV;{NN|[MP]|[D{I|L}]|[EV]}N{I|L}YVPQV;{NN|[MP]|[D{I|L}]|[EV]}NVY{I|L}PQV;{[QV]|[N{I|L}]|[RA]|[KV]}DV{I|L}YPQV;[Y{I|L}][DV]QVPQV 6.9341;6.7183;6.71;6.5156;6.0977;6.0935;5.9407;5.738;5.5921;5.5743 +;-;-;-;-;-;-;-;-;- + 2274 1 1.499 112744.6 0.4199999868869781 3741 5719 9454 SUDHL4_400M_050219_2,9462 SUDHL4_400M_050219_2,9462,YLNLDVPQV True True YLNLDVPQV 53.552433 530.787402331829 1192046.25 9454.0 chr7:102289517-102300522|27|12.96|0.03|8.86|+|0|None,SH2B2|1 6.760230541229248 2.0 True 9.0 False splicing PXD020620_cell_line SUDHL4_400M_050219_2 9463 53.566 800.0 155440.0 25 0 38307.0 + 8970 FAPSGRVA 8 116 402.72066106055 803.4267691878999 2 402.7207824587822 MULTI CID FTMS 0 0 0 9454 95333.46875 1.0 0 0.0 9 Unmodified _FAPSGRVA_ REV__ENST00000361320.4_1_10:68685815-68685899:+|nuORF;REV__ENST00000535024.5_3_12:11199749-11324198:-|nuORF 5.230669730166228 0.792582437072536 6 K 1 -1 9.3971 0.0 0.0 1.1696 0.0 0.0 657.3211611330156 0.0 657.3211611330156 0.0 0.6246936830414995 0.0 0.0 0 0.0 0.0 0.0 0.0 K 1.1696 - 18 + 1 1.499 98142.1 0.3700000047683716 3742 5719 9454 SUDHL4_400M_050219_2,9463 SUDHL4_400M_050219_2,9463,FAPSGRVA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9465 53.572 66.0 824580.0 25 0 67722.0 -1 0 58 902.4171593376232 1802.8197657420465 2 902.9198486208916 MULTI CID FTMS 0 0 0 9464 725656.8125 0.4630665386675515 2 -0.1154327392578125 1 6 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F} 11 -1 74.188 0.0 0.0 4.1151 0.0 0.0 0.0 518.2636283897599 518.2636283897599 54.979885958942674 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQNA{M(Oxidation (M))|F} 4.1151 - 1211 1 1.499 42577.6 1.0 3743 5720 9464 SUDHL4_400M_050219_2,9465 SUDHL4_400M_050219_2,9465, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9466 53.583 626.0 171020.0 25 0 26274.0 + 31016 RLFDEPQLASL 11 77 644.8480378947502 1287.6815228563005 2 644.8486816287041 MULTI CID FTMS 0 0 0 9464 86990.09375 0.3925344807625625 3 -0.1733016967773437 2 Unmodified _RLFDEPQLASL_ ENSG00000064726|ENST00000261721|BTBD1;ENSG00000133243|ENST00000255608|BTBD2;ENST00000587225.1_1_19:1989877-1990887:-|nuORF;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1 32.89776655970281 0.3218023389984559 6 {[TV]|[{I|L}S]}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EPQ{I|L}AS{I|L} 12 3 + 59.618 0.0 0.0 4.6299 4.6299 76.451 0.0 0.0 0.0 2.312958898387059 2.312958898387059 2.312958898387059 2.312958898387059 0 1.242992819099939 1.3979400086720375 0.2396518287104437 0.0 {[TV]|[{I|L}S]}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EPQ{I|L}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}QPE{[QN]|[E{I|L}]|[KN]}AS{I|L};{[TV]|[{I|L}S]}A{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EP[AG]{I|L}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}[AG]PE{[QN]|[E{I|L}]|[KN]}AS{I|L};[{M(Oxidation (M))|F}V][RK]PEE{I|L}AS{I|L};{[SA]|[TG]}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EPQ{I|L}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}QP[NS]{[VA]|[{I|L}G]}AS{I|L};{[MS]|[{M(Oxidation (M))|F}A]}A{I|L}QP[NS][Q{I|L}]S{I|L};{[SA]|[TG]}{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EP[AG]{I|L}AS{I|L};[{M(Oxidation (M))|F}V][RK]PEDVVS{I|L} 4.6299;4.4502;3.9233;3.7437;3.4261;3.4075;2.9671;2.8604;2.7009;2.3271 -;-;-;-;-;-;-;-;-;- 320 1 1.499 85842.6 1.0 3744 5720 9464 SUDHL4_400M_050219_2,9466 SUDHL4_400M_050219_2,9466,RLFDEPQLASL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9467 53.588 294.0 645260.0 25 0 61972.0 -1 0 125 957.9571792410478 1913.8998055488955 2 958.9601928591728 MULTI CID FTMS 0 0 0 9464 461837.375 1.0 0 0.0 3 6 VQY{M(Oxidation (M))|F}ANQQAEPA{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 15 -1 98.076 0.0 0.0 5.1244 0.0 0.0 129.09636655319702 0.0 129.09636655319702 0.0 57.346590369795045 0.0 0.0 0 0.0 0.0 0.0 2.298455006504028 VQY{M(Oxidation (M))|F}ANQQAEPA{M(Oxidation (M))|F}C(Carbamidomethyl (C)){I|L} 5.1244 - 17761 + 1 1.499 125523.0 1.0 3745 5720 9464 SUDHL4_400M_050219_2,9467 SUDHL4_400M_050219_2,9467, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9468 53.593 277.0 260180.0 25 0 29689.0 + 16831 KIADFGWSV 9 91 511.7689551510608 1021.5233573689216 2 511.7687255740166 MULTI CID FTMS 0 0 0 9464 197840.578125 0.1122535480030534 -3 0.1980781555175781 4 Unmodified _KIADFGWSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;ENSG00000087586|ENST00000395915|AURKA;ENSG00000105146|ENST00000302804|AURKC;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000105146|Q9UQB9-2|AURKC;nc|ENSG00000105146|Q9UQB9-3|AURKC;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 49.55428908609986 0.0413471690215031 6 [K{I|L}]AD{M(Oxidation (M))|F}GWSV 9 0 + 67.846 0.0 0.0 6.6417 6.6417 91.99 0.0 0.0 0.0 11.938200260161125 16.478174818886373 11.938200260161125 11.938200260161125 0 0.5 1.2218487496163564 0.805462187404089 0.0 + + [K{I|L}]AD{M(Oxidation (M))|F}GWSV;[VS][Q{I|L}]{M(Oxidation (M))|F}GWSV;[K{I|L}]ADWSG{M(Oxidation (M))|F}V;[VS][Q{I|L}]WSG{M(Oxidation (M))|F}V;[K{I|L}]ADW[YQ]V;{[QD]|[EN]|[WG]|[KD]|[RS]}S{M(Oxidation (M))|F}A[R{I|L}]SV;{[QD]|[EN]|[WG]|[KD]|[RS]}SV{M(Oxidation (M))|F}[K{I|L}]SV;{[QD]|[EN]|[WG]|[KD]|[RS]}S{M(Oxidation (M))|F}A[R{I|L}]GE;{[WS]|[C(Carbamidomethyl (C)){I|L}]}GV{M(Oxidation (M))|F}[K{I|L}]SV;[VS]{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}[K{I|L}]SV 6.6417;5.473;5.4347;4.2661;3.7268;3.4109;3.1162;2.9438;2.9438;2.849 +;-;-;-;-;-;-;-;-;- + 1075 1 1.499 59498.9 1.0 3746 5720 9464 SUDHL4_400M_050219_2,9468 SUDHL4_400M_050219_2,9468,KIADFGWSV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9469 53.607 800.0 61348.0 25 0 10910.0 + 19959 LIGDAFWVRR 10 68 616.8461707848982 1231.6777886365962 2 616.8466674685478 MULTI CID FTMS 0 0 0 9464 101242.921875 0.0322596096744491 6 -0.2185173034667968 5 Unmodified _LIGDAFWVRR_ REV__ENSG00000157077|ENST00000287727|ZFYVE9;REV__nc|ENSG00000157077|O95405-2|ZFYVE9 18.1463463914782 0.5430639438673815 6 {I|L}{I|L}{I|L}DV 5 -1 46.466 0.0 0.0 3.7726 0.0 0.0 0.0 675.3076552806917 675.3076552806917 32.971062485323515 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}{I|L}DV 3.7726 - 20 + 1 1.499 43434.1 0.4199999868869781 3747 5720 9464 SUDHL4_400M_050219_2,9469 SUDHL4_400M_050219_2,9469,LIGDAFWVRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9470 53.621 800.0 46424.0 25 0 3622.0 -1 0 72 976.4453178240856 2926.3141240724563 3 976.7796508669852 MULTI CID FTMS 0 0 0 9464 99786.0859375 1.0 0 0.0 6 6 {[TV]|[{I|L}S]}EVV 5 -1 17.364 0.0 0.0 0.59336 0.0 0.0 0.0 2395.9941527191936 2395.9941527191936 8.322646798160559 0.0 0.0 0.0 0 0.0 0.0 1.3807196863200843 0.0 {[TV]|[{I|L}S]}EVV 0.59336 - 485 1 1.499 33183.3 0.4699999988079071 3748 5720 9464 SUDHL4_400M_050219_2,9470 SUDHL4_400M_050219_2,9470, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9471 53.635 800.0 215170.0 25 0 19112.0 + 29498 QLLDQIWRT 9 131 586.824350402597 1171.634147871994 2 586.8245117068291 MULTI CID FTMS 0 0 0 9464 93062.421875 0.7724263532484018 -1 0.0629386901855468 7 Unmodified _QLLDQIWRT_ ENSG00000165934|ENST00000298875|CPSF2 84.5221896805406 0.0164210731287474 6 Q{I|L}{I|L}DQ{I|L}WRT 9 0 + 96.201 0.0 0.0 8.2109 8.2109 91.267 0.0 0.0 0.0 63.54724594294874 4.12923045039372 4.12923045039372 8.14271430438562 0 1.426935982160881 2.0 0.2887254899964357 1.045114016114533 + + Q{I|L}{I|L}DQ{I|L}WRT;Q{I|L}{I|L}DQ{I|L}S{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};Q{I|L}{I|L}D[AG]{I|L}WRT;Q{I|L}{I|L}DQS{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};Q{I|L}{I|L}DQTV{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};Q{I|L}{I|L}D[AG]{I|L}S{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};Q{I|L}{I|L}D[AG]S{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L};Q{I|L}{I|L}DQT[WR]{I|L};Q{I|L}{I|L}DQE[WK]{I|L};Q{I|L}{I|L}D[AG]TV{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L} 8.2109;7.5159;7.4249;7.332;6.9041;6.7337;6.5498;6.3466;6.3101;6.1219 +;-;-;-;-;-;-;-;-;- + 6060 + 1 1.499 131810.1 0.4000000059604645 3749 5720 9464 SUDHL4_400M_050219_2,9471 SUDHL4_400M_050219_2,9471,QLLDQIWRT True True QLLDQIWRT 53.634716 586.824511706829 698646.5625 9464.0 ENSG00000165934|ENST00000298875|CPSF2 5.08955717086792 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9473 53.648 507.0 101410.0 25 0 9037.4 + 42725 VVCPLYISA 9 78 482.7608035732731 963.5070542133462 2 482.7610961794853 MULTI CID FTMS 0 0 0 9472 94992.390625 0.4061621741732183 5 -0.1500358581542968 1 Unmodified _VVCPLYISA_ ENSG00000065802|ENST00000264607|ASB1 40.44857923139169 0.0729940656229577 6 {I|L}YP{I|L}PW 6 7 35.935 0.0 0.0 3.7296 0.0 0.0 176.08006554322748 0.0 176.08006554322748 0.0 6.714497253442531 0.0 0.0 0 1.5044321917401078 0.0 0.0 0.0 {I|L}YP{I|L}PW 3.7296 - 181 + 1 1.499 45538.2 1.0 3750 5721 9472 SUDHL4_400M_050219_2,9473 SUDHL4_400M_050219_2,9473,VVCPLYISA True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9474 53.661 800.0 128540.0 25 0 12594.0 + 33990 RLYEITIEV 9 117 568.320880844551 1134.6272087559018 2 568.3210937380791 MULTI CID FTMS 0 0 0 9472 94138.84375 1.0 0 0.0 2 Unmodified _SLILHPDLEV_ nc|ENSG00000132182|Q8TEM1-2|NUP210;ENSG00000132182|ENST00000254508|NUP210 46.020951573049366 0.1035046897853725 6 {[QN]|[E{I|L}]|[KN]}[YR]{I|L}T{I|L}EV 9 6 + 57.162 0.0 0.0 5.038 5.038 89.123 0.0 0.0 0.0 14.427346590861134 41.67789369254301 14.427346590861134 29.54750954047803 0 0.3054621874040891 1.2218487496163564 1.079689690656103 0.0 {[QN]|[E{I|L}]|[KN]}[YR]{I|L}T{I|L}EV;{[QN]|[E{I|L}]|[KN]}[YR][VP]{I|L}{M(Oxidation (M))|F}V;{[QN]|[E{I|L}]|[KN]}[YR]{I|L}[VP]{M(Oxidation (M))|F}V;[TP]AAV[RH]REV;[{I|L}T][QP][RH]REV;HH{I|L}[KP]Y{I|L}EV;[HQ]V[WP]K{I|L}EV;HHK[{I|L}P]Y{I|L}EV;[Q{I|L}][YK]AAT{I|L}EV;[VP][SG]V[RH]REV 5.038;2.4338;2.4338;2.3548;2.1419;1.828;1.624;1.6138;1.4013;1.1975 -;-;-;-;-;-;-;-;-;- 537 1 1.499 83268.5 0.9900000095367432 3751 5721 9472 SUDHL4_400M_050219_2,9474 SUDHL4_400M_050219_2,9474,SLILHPDLEV True False RLYEITIEV 53.661368 568.321093738079 594923.1875 9472.0 nc|ENSG00000132182|Q8TEM1-2|NUP210;;ENSG00000132182|ENST00000254508|NUP210 5.107703447341919 2.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9475 53.675 800.0 145230.0 25 0 8878.8 -1 0 117 880.89743655849 1759.7803201837798 2 881.3990966677666 MULTI CID FTMS 0 0 0 9472 93679.0859375 0.5862166961414658 -6 0.4134521484375 3 6 VEY{M(Oxidation (M))|F}ANQQAED[WM] 13 -1 80.466 0.0 0.0 4.5725 0.0 0.0 130.0794882065191 0.0 130.0794882065191 0.0 54.55803070128353 0.0 0.0 0 0.3494850021680094 0.0 0.3252574989159953 1.274227503252014 VEY{M(Oxidation (M))|F}ANQQAED[WM] 4.5725 - 995 + 1 1.499 82206.2 0.4199999868869781 3752 5721 9472 SUDHL4_400M_050219_2,9475 SUDHL4_400M_050219_2,9475, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9476 53.682 356.0 182440.0 25 0 8293.1 -1 0 99 1164.5378885458315 3490.5918362376947 3 1164.877246081829 MULTI CID FTMS 0 0 0 9472 238922.421875 0.2893081481369362 -10 0.5767593383789062 4 6 {I|L}VEY{M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 15 -1 51.781 0.0 0.0 1.4835 0.0 0.0 1746.794303133982 0.0 1746.794303133982 0.0 23.104028237526748 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}VEY{M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 1.4835 - 3830 + 1 1.499 47142.6 1.0 3753 5721 9472 SUDHL4_400M_050219_2,9476 SUDHL4_400M_050219_2,9476, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9478 53.698 800.0 116610.0 25 0 14177.0 + 1422 ALDPAAQAFL 10 127 508.7754028071676 0 508.7738525271416 PEAK CID FTMS 0 0 0 9477 82270.140625 0.7655345736929796 1 -0.0578689575195312 1 Unmodified _ALDPAAQAFL_ ENSG00000158615|ENST00000367188|PPP1R15B 27.628801355627647 0.2368261957778391 6 A{I|L}DAQ 5 5 32.449 0.0 0.0 3.1952 0.0 0.0 278.1639232928912 236.10396753482652 514.2678908277178 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.5994850021680094 A{I|L}DAQ 3.1952 - 375 + 1 1.499 74092.3 0.9300000071525574 3754 5722 9477 SUDHL4_400M_050219_2,9478 SUDHL4_400M_050219_2,9478,ALDPAAQAFL False True ALDPAAQAFL 53.698051 508.773852527142 845376.9375 9477.0 ENSG00000158615|ENST00000367188|PPP1R15B 4.1024580001831055 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9479 53.712 800.0 160560.0 25 0 12685.0 + 29611 QLVRDLLEV 9 121 542.8215877553687 1083.6286225775373 2 542.8208495974541 MULTI CID FTMS 0 0 0 9477 93476.7578125 0.7769696040904945 -4 0.262725830078125 2 Unmodified _QLVRDLLEV_ ENSG00000109320|ENST00000226574|NFKB1;nc|ENSG00000109320|P19838-3|NFKB1;nc|ENSG00000109320|P19838|NFKB1 103.35351024395868 0.0092202910191236 6 {[QN]|[E{I|L}]|[KN]}Q[Q{I|L}]{I|L}{I|L}EV 9 4 + 76.88 0.0 0.0 7.0946 7.0946 81.926 0.0 0.0 0.0 7.62614548380499 13.441121270326065 7.62614548380499 0.9691001300805624 0 0.7302046884880937 1.154901959985743 1.7912359745699709 1.805462187404089 {[QN]|[E{I|L}]|[KN]}Q[Q{I|L}]{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[RV]N{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]N{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[AG][Q{I|L}]{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[RV]GG{I|L}{I|L}EV;[Q{I|L}][KQ]N{I|L}{I|L}EV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]GG{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}Q[Q{I|L}]{I|L}E{I|L}V;[Q{I|L}][KQ]GG{I|L}{I|L}EV;{[QN]|[E{I|L}]|[KN]}[RV]N{I|L}E{I|L}V 7.0946;7.0052;6.3909;6.2449;6.1555;6.1214;5.5411;5.2896;5.2716;5.2001 -;-;-;-;-;-;-;-;-;- 444 1 1.499 102691.5 0.3899999856948852 3755 5722 9477 SUDHL4_400M_050219_2,9479 SUDHL4_400M_050219_2,9479,QLVRDLLEV True True QLVRDLLEV 53.711882 542.820849597454 666758.875 9477.0 ENSG00000109320|ENST00000226574|NFKB1;;nc|ENSG00000109320|P19838|NFKB1;;nc|ENSG00000109320|P19838-3|NFKB1 5.385625044504802 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9480 53.726 800.0 152920.0 25 0 22146.0 + 17116 KLFQGQLVL 9 126 523.3240428855937 1044.633532837987 2 523.3233520388603 MULTI CID FTMS 0 0 0 9477 86460.3125 0.5083006505027698 -2 0.1154327392578125 3 Unmodified _KLFQGQLVL_ ENSG00000162607|ENST00000339950|USP1 64.23631603340823 0.0237365939569086 6 [AG]GQ{M(Oxidation (M))|F}{I|L}K{I|L}V{I|L} 10 6 + 74.88 0.0 0.0 7.1681 7.1681 84.612 0.0 0.0 0.0 2.6722032235195314 16.53212513775344 2.6722032235195314 2.6722032235195314 0 0.9247425010840048 1.0457574905606752 0.0 2.084121882396211 [AG]GQ{M(Oxidation (M))|F}{I|L}K{I|L}V{I|L};{[QG]|[NA]}Q{M(Oxidation (M))|F}{I|L}K{I|L}V{I|L};{[QN]|[E{I|L}]|[KN]}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}K{I|L}V{I|L};{[QG]|[NA]}[AG]{M(Oxidation (M))|F}{I|L}K{I|L}V{I|L};[AG]G{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{I|L}V{I|L};[K{I|L}]{M(Oxidation (M))|F}QGQ{I|L}V{I|L};[AG]{M(Oxidation (M))|F}{[QG]|[NA]}{I|L}K{I|L}V{I|L};{[QG]|[NA]}{I|L}{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}K{I|L}V{I|L};[AG]G[AG]{M(Oxidation (M))|F}{I|L}K{I|L}V{I|L};{I|L}{I|L}E{[MS]|[{M(Oxidation (M))|F}A]}K{I|L}V{I|L} 7.1681;6.9123;6.0808;6.0308;5.8513;5.6629;5.6229;5.5955;5.5155;5.2934 -;-;-;-;-;+;-;-;-;- + 1232 1 1.499 108111.0 0.3799999952316284 3756 5722 9477 SUDHL4_400M_050219_2,9480 SUDHL4_400M_050219_2,9480,KLFQGQLVL True True KLFQGQLVL 53.725713 523.32335203886 942193.5 9477.0 ENSG00000162607|ENST00000339950|USP1 5.382510185241699 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9481 53.74 800.0 75690.0 25 0 13899.0 + 30375 RALLLGAL 8 75 413.7793268593298 825.5441007854597 2 413.7784911990166 MULTI CID FTMS 0 0 0 9477 86477.3203125 0.605990068178623 -1 0.0469512939453125 4 Unmodified _RALLLGAL_ ENST00000281187.9_1_11:134094584-134094950:+|nuORF;ENST00000525095.2_1_11:134094621-134094950:+|nuORF 30.22481116460888 0.4082965392918993 6 {I|L}{I|L}GA{I|L} 5 3 46.81 0.0 0.0 5.6702 0.0 0.0 340.2222157209 0.0 340.2222157209 0.0 31.12395659563255 0.0 0.0 0 1.424742501084005 0.0 0.0 0.0 + {I|L}{I|L}GA{I|L} 5.6702 + + 76 1 1.499 55224.0 0.9900000095367432 3757 5722 9477 SUDHL4_400M_050219_2,9481 SUDHL4_400M_050219_2,9481,RALLLGAL False True RALLLGAL 53.739528 413.778491199017 637042.125 9477.0 ENST00000281187.9_1_11:134094584-134094950:+|nuORF;;ENST00000525095.2_1_11:134094621-134094950:+|nuORF -0.160848135749499 2.0 True 8.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9483 53.744 28.0 2320200.0 25 0 239960.0 + 9211 FGGVLILIHR 10 67 562.8504048849444 1123.6862568366887 2 562.8505126833916 MULTI CID FTMS 0 0 0 9482 1777676.875 0.3966581998887013 3 -0.0452156066894531 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 30.63653989081413 0.2803493085145199 6 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 102.13 0.0 0.0 9.0891 9.0891 94.11 0.0 0.0 0.0 91.67525978212625 17.899765408488904 17.899765408488904 9.208187539523747 0 0.8494850021680094 2.0 0.0 0.805462187404089 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR 9.0891;8.2696 -;- 115 + 1 1.499 55557.4 1.0 3758 5723 9482 SUDHL4_400M_050219_2,9483 SUDHL4_400M_050219_2,9483,FGGVLILIHR False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9484 53.748 201.0 315060.0 25 0 36569.0 + 17278 KLQDQIFNL 9 84 559.8142204568715 1117.6138879805428 2 559.8138305544853 MULTI CID FTMS 0 0 0 9482 218923.515625 0.9951008818483696 -1 0.0578689575195312 2 Unmodified _KLQDQIFNL_ ENSG00000148908|ENST00000369103|RGS10;nc|ENSG00000148908|O43665-1|RGS10;nc|ENSG00000148908|O43665-2|RGS10 66.45667989310934 0.0225072657982126 6 {[QV]|[N{I|L}]|[RA]|[KV]}EQK{I|L}{M(Oxidation (M))|F}N{I|L} 9 4 + 75.606 0.0 0.0 6.7649 6.7649 80.631 0.0 0.0 0.0 0.6297781291262794 14.973024840566469 0.6297781291262794 0.6297781291262794 0 1.2302046884880935 1.0457574905606752 0.3494850021680094 1.1549471895720984 {[QV]|[N{I|L}]|[RA]|[KV]}EQK{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}QQK{I|L}{M(Oxidation (M))|F}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EKQ{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}QKQ{I|L}{M(Oxidation (M))|F}N{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}QK{I|L}{M(Oxidation (M))|F}N{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}EQK{I|L}{M(Oxidation (M))|F}GG{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}E[AG]K{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}[AG]QK{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}Q[AG]K{I|L}{M(Oxidation (M))|F}N{I|L};{NN|[MP]|[D{I|L}]|[EV]}QQK{I|L}{M(Oxidation (M))|F}GG{I|L} 6.7649;6.7086;6.4089;6.3525;6.0119;5.941;5.941;5.8847;5.8847;5.8847 -;-;-;-;-;-;-;-;-;- 517 1 1.499 55280.3 1.0 3759 5723 9482 SUDHL4_400M_050219_2,9484 SUDHL4_400M_050219_2,9484,KLQDQIFNL True True KLQDQIFNL 53.748232 559.813830554485 1417133.375 9482.0 ENSG00000148908|ENST00000369103|RGS10;;nc|ENSG00000148908|O43665-2|RGS10;;nc|ENSG00000148908|O43665-1|RGS10 5.535215854644775 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9485 53.757 472.0 136010.0 25 0 9897.1 -1 0 82 931.4204751355036 1860.826397337807 2 931.9222289919852 MULTI CID FTMS 0 0 0 9482 112866.75 1.0 0 0.0 3 6 {[QV]|[N{I|L}]|[RA]|[KV]}YEECQQNA{M(Oxidation (M))|F} 11 -1 53.677 0.0 0.0 2.8846 0.0 0.0 0.0 518.2595007848769 518.2595007848769 31.73834801383148 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0 0.4247425010840047 {[QV]|[N{I|L}]|[RA]|[KV]}YEECQQNA{M(Oxidation (M))|F} 2.8846 - 736 1 1.499 48247.8 1.0 3760 5723 9482 SUDHL4_400M_050219_2,9485 SUDHL4_400M_050219_2,9485, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9486 53.77 800.0 68161.0 25 0 26050.0 -1 RTSRIRRRKLC 11 57 751.4498971580396 1500.885241382879 2 751.4500610232353 MULTI CID FTMS 0 0 0 9482 92780.3203125 1.0 0 0.0 4 Carbamidomethyl (C) _RTSRIRRRKLC(Carbamidomethyl (C))_ ENSG00000185917|ENST00000332131|SETD4;ENST00000399212.5_1_21:37429498-37431186:-|nuORF;ENST00000481477.5_1_21:37418129-37431186:-|nuORF;nc|ENSG00000185917|Q9NVD3-2|SETD4;nc|ENSG00000185917|Q9NVD3-4|SETD4 0.3506318815782774 0.8734936314171269 6 {M(Oxidation (M))|F} 1 -1 1.5938 0.0 0.0 0.10619 0.0 0.0 1209.763703152213 141.0560244195922 1350.8197275718055 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.10619 - 13 + 1 1.499 52857.4 0.4000000059604645 3761 5723 9482 SUDHL4_400M_050219_2,9486 SUDHL4_400M_050219_2,9486,RTSRIRRRKLC False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9488 53.775 16.0 3235700.0 25 0 435470.0 + 9208 FGGVLILIHR 10 66 375.5693376546222 1123.6861835640666 3 375.5693847537041 MULTI CID FTMS 0 0 0 9487 3068685.5 0.2634900058877032 4 -0.0528793334960937 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 30.63653989081413 0.2803493085145199 6 N{I|L}{I|L}{I|L}HR 6 5 51.815 0.0 0.0 4.6112 0.0 0.0 359.2204158799529 0.0 359.2204158799529 0.0 36.76599703664159 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.6861818737241735 N{I|L}{I|L}{I|L}HR 4.6112 - 83 + 1 1.499 49177.1 1.0 3762 5724 9487 SUDHL4_400M_050219_2,9488 SUDHL4_400M_050219_2,9488,FGGVLILIHR False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9489 53.777 66.0 924900.0 25 0 117510.0 + 15090 IMLEALERV 9 62 537.3044657716225 1072.594378610045 2 537.3048583865166 MULTI CID FTMS 0 0 0 9487 580463.5625 0.3510610245713539 3 -0.0488090515136718 2 Unmodified _IMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 41.95555342248728 0.0647214845423414 6 {I|L}M{I|L}EA{I|L}E[RV] 9 0 + 89.403 0.0 0.0 8.3352 8.3352 96.519 0.0 0.0 0.0 66.26918465971855 9.009461452434238 9.009461452434238 18.750612633917 0 0.8494850021680094 2.0 0.3807196863200844 0.4247425010840047 + + {I|L}M{I|L}EA{I|L}E[RV];{I|L}M{I|L}V[DV]E[RV];{I|L}M{I|L}EV[DV][RV];{I|L}M{I|L}VE[DV][RV];{I|L}MV[DV]{I|L}E[RV];{I|L}MV{I|L}[DV]E[RV];{I|L}MV{I|L}E[DV][RV];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}V{I|L}[EP];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}{I|L}V[EP];{[QN]|[E{I|L}]|[KN]}A[R{M(Oxidation (M))|F}]V{I|L}[EP] 8.3352;6.587;6.4229;6.1422;5.8361;5.5554;5.1106;4.2111;4.0416;3.9969 +;-;-;-;-;-;-;-;-;- + 223 + 1 1.499 54622.2 1.0 3763 5724 9487 SUDHL4_400M_050219_2,9489 SUDHL4_400M_050219_2,9489,IMLEALERV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9491 53.782 75.0 552990.0 25 0 35400.0 + 28520 PTLQRRLQQA 10 71 605.855554337379 1209.696555741558 2 605.8558227419853 MULTI CID FTMS 0 0 0 9490 589508.375 0.0136586513340385 12 -0.2108306884765625 1 Unmodified _PTLQRRLQQA_ REV__CON__Q32PJ2 13.90604991867851 0.6142120002215601 6 [TP]AAVD{I|L}{I|L}{I|L} 9 -1 28.63 0.0 0.0 2.3667 0.0 0.0 0.0 313.1519750132954 313.1519750132954 -1.7764935899867815 0.0 -1.7764935899867815 0.0 0 0.0 0.0 0.8609243748081781 0.0 [TP]AAVD{I|L}{I|L}{I|L} 2.3667 - 286 1 1.499 37507.2 1.0 3764 5725 9490 SUDHL4_400M_050219_2,9491 SUDHL4_400M_050219_2,9491,PTLQRRLQQA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9492 53.785 157.0 516030.0 25 0 56636.0 + 15092 IMLEALERV 9 81 545.3020767276422 1088.5896005220843 2 545.3019286990166 MULTI CID FTMS 0 0 0 9490 316539.9375 0.2460463628111894 4 -0.05706787109375 2 Oxidation (M) _IM(Oxidation (M))LEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 40.23920728925047 0.0741434193262949 6 {I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}E[RV] 9 0 + 59.633 0.0 0.0 5.478 5.478 88.979 0.0 0.0 0.0 41.6005558229044 4.137342758552691 4.137342758552691 13.601514477826376 0 1.325257498915995 0.0 0.3807196863200844 0.0 + + {I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}E[RV];{I|L}{M(Oxidation (M))|F}{I|L}EA{I|L}{[QG]|[NA]}[KA];{I|L}{M(Oxidation (M))|F}{I|L}V[DV]E[RV];{I|L}{M(Oxidation (M))|F}{I|L}VE[DV][RV];{I|L}{M(Oxidation (M))|F}{I|L}EV[DV][RV];{I|L}{M(Oxidation (M))|F}V[DV]{I|L}E[RV];{I|L}{M(Oxidation (M))|F}V{I|L}[DV]E[RV];{I|L}{M(Oxidation (M))|F}{I|L}V[DV]{[QG]|[NA]}[KA];{I|L}{M(Oxidation (M))|F}V{I|L}E[DV][RV];{I|L}H[WH]{I|L}E[RV] 5.478;4.2285;4.0321;3.5938;3.5715;2.9465;2.9465;2.7826;2.5082;1.7303 +;-;-;-;-;-;-;-;-;- + 577 + 1 1.499 65207.4 1.0 3765 5725 9490 SUDHL4_400M_050219_2,9492 SUDHL4_400M_050219_2,9492,IMLEALERV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9494 53.798 593.0 195350.0 25 0 12005.0 + 17304 KLSEIPLTL 9 124 507.3157817690044 1012.6170106048088 2 507.3150817751884 MULTI CID FTMS 0 0 0 9493 134152.046875 0.4914874860251407 -4 0.1030845642089843 1 Unmodified _KLSEIPLTL_ ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B 49.55428908609986 0.0413471690215031 6 [{I|L}T]DK{I|L}P{I|L}T{I|L} 9 3 + 74.508 0.0 0.0 7.358 7.358 86.509 0.0 0.0 0.0 3.679767852945943 16.478174818886373 3.679767852945943 3.679767852945943 0 1.3494850021680094 1.2218487496163564 0.9163865622122672 0.0 [{I|L}T]DK{I|L}P{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}SK{I|L}P{I|L}T{I|L};[{I|L}P]T{I|L}{I|L}TAAT{I|L};[{I|L}T]DKP{I|L}{I|L}T{I|L};[{I|L}T]P{I|L}{I|L}TAAT{I|L};{[TV]|[{I|L}S]}EK{I|L}P{I|L}T{I|L};{[ES]|[DT]|[{I|L}C]}{I|L}K{I|L}P{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}SKP{I|L}{I|L}T{I|L};[{I|L}T]{I|L}[SG]VP{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}[KT]VP{I|L}T{I|L} 7.358;6.9946;5.9338;5.6494;5.586;5.4907;5.3168;5.286;5.2308;5.1142 -;-;-;-;-;-;-;-;-;- 837 1 1.499 94346.2 1.0 3766 5726 9493 SUDHL4_400M_050219_2,9494 SUDHL4_400M_050219_2,9494,KLSEIPLTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9495 53.805 433.0 351520.0 25 0 192610.0 + 44341 YLPPGFLSA 9 51 964.5130460011604 963.5057695345604 1 964.5150024294852 MULTI CID FTMS 0 0 0 9493 248364.34375 0.3427413428654129 11 -0.2029228210449218 2 Unmodified _YLPPGFLSA_ ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-4|SREBF1 63.562846038646086 0.0241094678104353 6 [Y{I|L}]PPG{M(Oxidation (M))|F}{I|L}SA 9 0 + 64.792 0.0 0.0 6.7246 6.7246 91.749 0.0 0.0 0.0 17.567978389287404 25.67410004652736 17.567978389287404 10.791812460476253 0 1.0 1.6989700043360187 0.0 0.0 + + [Y{I|L}]PPG{M(Oxidation (M))|F}{I|L}SA;[Y{I|L}]PPGAAY{I|L};[Y{I|L}]PPQAY{I|L};[Y{I|L}]PPGA[Y{I|L}]A;[Y{I|L}]PPQ[Y{I|L}]A;[Y{I|L}]PPG{M(Oxidation (M))|F}{[SA]|[TG]}{I|L};Y{I|L}{[DS]|[MA]|[CV]|TT}A{I|L}[WP];[Y{I|L}]AQ[QA]{I|L}SA;[Y{I|L}]AQ{[HG]|PP}Y{I|L} 6.7246;5.6045;5.557;5.0909;5.0434;4.466;4.1722;4.0332;2.5532 +;-;-;-;-;-;-;-;- + 286 1 1.499 105520.1 1.0 3767 5726 9493 SUDHL4_400M_050219_2,9495 SUDHL4_400M_050219_2,9495,YLPPGFLSA True True YLPPGFLSA 53.805436 964.515002429485 21166857.375 9493.0 ENST00000395756.5_1_17:17715938-17721122:-|nuORF;;ENSG00000072310|ENST00000261646|SREBF1;;nc|ENSG00000072310|P36956-4|SREBF1 9.064240137736002 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9496 53.819 800.0 190520.0 25 0 8900.0 + 32564 SASESILEL 9 115 948.4886077931504 947.4813313265504 1 948.491259753704 MULTI CID FTMS 0 0 0 9493 108974.421875 0.3731449258195037 -8 0.3658103942871094 3 Unmodified _SASESILEL_ ENSG00000151503|ENST00000534548|NCAPD3 61.357469665136826 0.0253304979873734 6 {I|L}{I|L}AA[WD]{M(Oxidation (M))|F}{I|L} 8 8 + 58.391 0.0 0.0 6.1627 6.1627 84.124 0.0 0.0 0.0 5.255762612236907 8.005215510555033 5.255762612236907 4.582887833543552 0 0.6747425010840047 1.3010299956639813 0.9247425010840048 0.0 {I|L}{I|L}AA[WD]{M(Oxidation (M))|F}{I|L};{I|L}{I|L}AAG{[{M(Oxidation (M))|F}D]|MM}E{I|L};{I|L}{I|L}AACC{I|L}E{I|L};{I|L}{I|L}AACCE{I|L}{I|L};[{I|L}A]{I|L}A[WD]{M(Oxidation (M))|F}{I|L};{I|L}{I|L}AA[WD]{I|L}{M(Oxidation (M))|F};{I|L}{I|L}AA{I|L}CCE{I|L};[{I|L}A]{I|L}AG{[{M(Oxidation (M))|F}D]|MM}E{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}DA{I|L}{I|L}{M(Oxidation (M))|F}{I|L};[{I|L}A]{I|L}ACC{I|L}E{I|L} 6.1627;5.679;5.6549;5.628;5.608;5.3173;5.2665;5.1243;5.1033;5.1002 -;-;-;-;-;-;-;-;-;- 1671 1 1.499 102609.7 0.449999988079071 3768 5726 9493 SUDHL4_400M_050219_2,9496 SUDHL4_400M_050219_2,9496,SASESILEL True True SASESILEL 53.819283 948.491259753704 1532579.625 9493.0 ENSG00000151503|ENST00000534548|NCAPD3 1.6172171036402383 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9499 53.831 290.0 284270.0 25 0 39724.0 + 9640 FLNGEVIRL 9 82 530.8113386176387 1059.6081243020774 2 530.8113281130791 MULTI CID FTMS 0 0 0 9498 145584.203125 0.3303842062163818 -7 0.1886215209960937 1 Unmodified _FLNGEVIRL_ ENSG00000072506|ENST00000168216|HSD17B10;ENST00000477706.1_1_X:53458354-53459024:-|nuORF;nc|ENSG00000072506|Q99714-2|HSD17B10 38.17557092003332 0.0854718145212029 6 {M(Oxidation (M))|F}{I|L}NGEV{I|L}R{I|L} 9 0 + 70.187 0.0 0.0 6.6239 6.6239 86.515 0.0 0.0 0.0 60.27262325826777 8.913639751834097 8.913639751834097 6.020599913279625 0 0.4247425010840047 0.0 0.0 1.035666875892183 + + {M(Oxidation (M))|F}{I|L}NGEV{I|L}R{I|L};{M(Oxidation (M))|F}{I|L}NGE{I|L}VR{I|L};{M(Oxidation (M))|F}{I|L}GGGEV{I|L}R{I|L};{M(Oxidation (M))|F}{I|L}GGGE{I|L}VR{I|L};{M(Oxidation (M))|F}{I|L}NGE{I|L}[R{I|L}]V;{M(Oxidation (M))|F}{I|L}GGGE{I|L}[R{I|L}]V 6.6239;6.0557;5.7549;5.1867;4.6957;3.8267 +;-;-;-;-;- + 210 + 1 1.499 68696.1 1.0 3769 5728 9498 SUDHL4_400M_050219_2,9499 SUDHL4_400M_050219_2,9499,FLNGEVIRL True True FLNGEVIRL 53.831223 530.811328113079 2093428.25 9498.0 ENST00000477706.1_1_X:53458354-53459024:-|nuORF;;nc|ENSG00000072506|Q99714-2|HSD17B10;;ENSG00000072506|ENST00000168216|HSD17B10 5.622767448425293 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9500 53.834 130.0 783000.0 25 0 52429.0 -1 0 94 957.9571792410478 1913.8998055488955 2 957.9601318240166 MULTI CID FTMS 0 0 0 9498 410043.5625 0.9519227776651278 -6 0.1416702270507812 2 6 [MN]PN{I|L}NAD 8 -1 47.968 0.0 0.0 2.5063 0.0 0.0 0.0 1041.51163702244 1041.51163702244 21.98174920559176 0.0 0.0 0.0 0 0.7856668758921829 1.5228787452803376 0.0 0.4247425010840047 [MN]PN{I|L}NAD 2.5063 - 436 + 1 1.499 74118.9 1.0 3770 5728 9498 SUDHL4_400M_050219_2,9500 SUDHL4_400M_050219_2,9500, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9503 53.843 44.0 1049800.0 25 0 125030.0 + 16832 KIADFGWSV 9 67 511.7689551510608 1021.5233573689216 2 511.7690917849541 MULTI CID FTMS 0 0 0 9502 1136282.75 0.6447199630683275 7 -0.1498680114746093 1 Unmodified _KIADFGWSV_ chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;ENSG00000087586|ENST00000395915|AURKA;ENSG00000105146|ENST00000302804|AURKC;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000105146|Q9UQB9-2|AURKC;nc|ENSG00000105146|Q9UQB9-3|AURKC;nc|ENSG00000178999|Q96GD4-2|AURKB;nc|ENSG00000178999|Q96GD4-4|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB 26.268140514670165 0.1969607489560049 6 [VS][Q{I|L}]{M(Oxidation (M))|F}GWSV 9 4 + 38.306 0.0 0.0 3.7499 3.7499 85.365 0.0 0.0 0.0 6.222412206649473 22.10795294801266 6.222412206649473 33.18758762624413 0 0.8182503180159344 1.3010299956639813 0.0 0.0 [VS][Q{I|L}]{M(Oxidation (M))|F}GWSV;{[QD]|[EN]|[WG]|[KD]|[RS]}[W{M(Oxidation (M))|F}][K{I|L}]SV 3.7499;0.50104 -;- 100 1 1.499 44234.2 1.0 3771 5730 9502 SUDHL4_400M_050219_2,9503 SUDHL4_400M_050219_2,9503,KIADFGWSV False True KIADFGWSV 53.842606 511.769091784954 20560886.0 9502.0 nc|ENSG00000178999|Q96GD4-4|AURKB;;ENSG00000178999|ENST00000585124|AURKB;;chr17:8206934-8207318|48|19.25|0.54|5.16|-|ENST00000578549|AURKB,AURKB;;nc|ENSG00000178999|Q96GD4-5|AURKB;;ENSG00000105146|ENST00000302804|AURKC;;nc|ENSG00000105146|Q9UQB9-2|AURKC;;nc|ENSG00000178999|Q96GD4-2|AURKB;;nc|ENSG00000105146|Q9UQB9-3|AURKC;;chr17:8207370-8207571|48|11.35|0.44|4.71|-|ENST00000577833|AURKB,AURKB;;ENSG00000087586|ENST00000395915|AURKA 5.162829399108887 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9504 53.856 800.0 45992.0 25 0 2801.2 -1 0 58 873.6547816914667 3490.5900208994667 4 873.9073364138603 MULTI CID FTMS 0 0 0 9502 20959.5625 0.2761374898783258 1 -0.0186347961425781 2 6 {M(Oxidation (M))|F}ANQQ 5 -1 24.609 0.0 0.0 0.70501 0.0 0.0 2251.063639074152 648.2382906549436 2899.301929729096 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.3807196863200844 {M(Oxidation (M))|F}ANQQ 0.70501 - 190 + 1 1.499 33046.9 0.3700000047683716 3772 5730 9502 SUDHL4_400M_050219_2,9504 SUDHL4_400M_050219_2,9504, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9507 53.869 300.0 191330.0 25 0 20527.0 + 17285 KLQEFLQTL 9 99 560.3242165013256 1118.6338800694512 2 560.3246337771416 MULTI CID FTMS 0 0 0 9506 104690.03125 0.0709658459597938 -11 0.2257957458496093 1 Unmodified _KLQEFLQTL_ ENSG00000140525|ENST00000310775|FANCI;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-4|FANCI 49.55428908609986 0.0413471690215031 6 [{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}QT{I|L} 10 3 + 74.275 0.0 0.0 6.6398 6.6398 89.069 0.0 0.0 0.0 6.75846205488881 47.58787086283171 6.75846205488881 9.164539485499247 0 0.5 1.5228787452803376 0.5796896906561032 0.7614393726401688 [{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}QT{I|L};[{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}[AG]T{I|L};[Q{I|L}]KE{M(Oxidation (M))|F}{I|L}QT{I|L};[{I|L}T][AG][VG]{M(Oxidation (M))|F}{I|L}QT{I|L};[Q{I|L}]T[VG]{M(Oxidation (M))|F}{I|L}QT{I|L};[K{I|L}]QE{M(Oxidation (M))|F}{I|L}QT{I|L};[Q{I|L}]KE{M(Oxidation (M))|F}{I|L}[AG]T{I|L};[Q{I|L}]{M(Oxidation (M))|F}EK{I|L}QT{I|L};[{I|L}T]QR{M(Oxidation (M))|F}{I|L}[WR];[Q{I|L}]T[VG]{M(Oxidation (M))|F}{I|L}[AG]T{I|L} 6.6398;5.8205;5.6381;5.4802;5.4358;5.2454;4.815;4.7304;4.6894;4.6166 -;-;-;-;-;+;-;-;-;- + 1902 1 1.499 51686.2 1.0 3773 5732 9506 SUDHL4_400M_050219_2,9507 SUDHL4_400M_050219_2,9507,KLQEFLQTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9508 53.882 800.0 113720.0 25 0 17799.0 28280 PRLNVRRTART 11 94 447.2730270509702 1338.797251753111 3 447.2726318240166 MULTI CID FTMS 0 0 0 9506 92880.1171875 0.7414863649928946 -4 0.0371742248535156 2 Unmodified _PRLNVRRTART_ ENST00000248437.8_1_2:220116950-220118623:-|nuORF 1.1933415558491238 0.8695176722560516 6 {I|L} 1 10 10.837 0.0 0.0 0.80949 0.0 0.0 1207.7024316620934 0.0 1207.7024316620934 0.0 7.738511645026849 0.0 0.0 0 0.0 0.0 0.0 0.0 + {I|L} 0.80949 + + 9 + 1 1.499 80337.5 0.3600000143051147 3774 5732 9506 SUDHL4_400M_050219_2,9508 SUDHL4_400M_050219_2,9508,PRLNVRRTART False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9510 53.899 800.0 77367.0 25 0 7286.6 -1 0 79 1046.515585879533 3136.5249282388004 3 1046.849291980267 MULTI CID FTMS 0 0 0 9509 75801.78125 1.0 0 0.0 1 6 [MN][KT]{I|L}NAA{M(Oxidation (M))|F}N 10 -1 50.512 0.0 0.0 1.6104 0.0 0.0 0.0 2028.970826026163 2028.970826026163 39.542717388455046 0.0 0.0 0.0 0 0.5 2.0 1.1989700043360187 0.2887254899964357 [MN][KT]{I|L}NAA{M(Oxidation (M))|F}N 1.6104 - 424 1 1.499 50904.3 0.4099999964237213 3775 5733 9509 SUDHL4_400M_050219_2,9510 SUDHL4_400M_050219_2,9510, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9511 53.913 800.0 233510.0 25 0 22742.0 -1 0 100 634.0279077837886 1899.0618939515657 3 634.0281860232353 MULTI CID FTMS 0 0 0 9509 114023.3359375 0.659016038283741 -3 0.0445594787597656 2 6 {I|L}{I|L}WV[{I|L}V]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V{I|L} 10 -1 61.348 0.0 0.0 3.2304 0.0 0.0 0.0 699.3440035455686 699.3440035455686 24.235162698957275 0.0 0.0 0.0 0 0.805462187404089 1.6989700043360187 0.0 0.805462187404089 {I|L}{I|L}WV[{I|L}V]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}V{I|L} 3.2304 - 450 + 1 1.499 139468.1 0.4300000071525574 3776 5733 9509 SUDHL4_400M_050219_2,9511 SUDHL4_400M_050219_2,9511, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9512 53.926 800.0 132100.0 25 0 25158.0 -1 0 107 965.9580910397184 1929.901629146237 2 965.9591552615166 MULTI CID FTMS 0 0 0 9509 100786.359375 0.5541539940793581 -4 0.0484542846679687 3 6 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[NP]NADQQ{I|L}Y{I|L}M[H{I|L}] 16 -1 + 65.766 0.0 0.0 3.4077 3.4077 73.079 0.0 0.0 0.0 50.91132707281062 0.9691001300805624 0.9691001300805624 2.4865124202832334 0 0.8807196863200843 0.0 0.4247425010840047 0.7742275032520141 {[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[NP]NADQQ{I|L}Y{I|L}M[H{I|L}];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NADQQ{I|L}Y{I|L}M[H{I|L}];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[NP]NADQEVA[RD]Q{[TV]|[{I|L}S]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[NP]{I|L}NADQEVA[RD]Q{[TV]|[{I|L}S]};[NP]{I|L}N[H{I|L}]VEQDAN[NP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};[PG]G{I|L}N[H{I|L}]VEQDAN[NP]{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[NP]NADQEV[WR]Q{[TV]|[{I|L}S]};[NP]{I|L}N[H{I|L}]VEQDAN{I|L}[NP]{[QD]|[EN]|[WG]|[KD]|[RS]};{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[NP]NADQ[AG]{I|L}Y{I|L}M[H{I|L}];{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{I|L}[NP]NAD[AG]Q{I|L}Y{I|L}M[H{I|L}] 3.4077;3.2789;3.2396;3.1108;3.0871;3.0332;2.983;2.9582;2.9407;2.9407 -;-;-;-;-;-;-;-;-;- 6844 + 1 1.499 73951.0 0.8299999833106995 3777 5733 9509 SUDHL4_400M_050219_2,9512 SUDHL4_400M_050219_2,9512, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9514 53.934 198.0 327530.0 25 0 16733.0 -1 0 75 1164.5378885458315 3490.5918362376947 3 1165.207568347454 MULTI CID FTMS 0 0 0 9513 576560.3125 0.6825179882090039 2 -0.0309829711914062 1 6 VQY{M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 14 -1 55.091 0.0 0.0 1.5783 0.0 0.0 1860.879299077064 0.0 1860.879299077064 0.0 30.410707272628912 0.0 0.0 0 0.0 0.0 0.0 0.6989700043360187 VQY{M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 1.5783 - 1430 + 1 1.499 44891.1 1.0 3778 5734 9513 SUDHL4_400M_050219_2,9514 SUDHL4_400M_050219_2,9514, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9515 53.941 350.0 203360.0 25 0 11192.0 -1 0 102 880.89743655849 1759.7803201837798 2 880.8983642458916 MULTI CID FTMS 0 0 0 9513 99854.34375 0.6491964988554936 4 -0.0651054382324218 2 6 [KT]EY{M(Oxidation (M))|F}ANQQAED 12 -1 64.378 0.0 0.0 3.6583 0.0 0.0 0.0 332.1004732721313 332.1004732721313 45.96192226428258 0.0 0.0 0.0 0 0.3054621874040891 0.0 0.0 0.0 [KT]EY{M(Oxidation (M))|F}ANQQAED 3.6583 - 612 + 1 1.499 51303.1 1.0 3779 5734 9513 SUDHL4_400M_050219_2,9515 SUDHL4_400M_050219_2,9515, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9516 53.947 367.0 136010.0 25 0 15267.0 + 40625 VLDDKLVFV 9 74 524.3087397272723 1046.6029265213444 2 524.3081542849541 MULTI CID FTMS 0 0 0 9513 87594.9609375 0.3731587853882731 -9 0.1496200561523437 3 Unmodified _VLDDKLVFV_ ENSG00000177119|ENST00000320560|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF;nc|ENSG00000177119|Q4KMQ2-2|ANO6;nc|ENSG00000177119|Q4KMQ2-3|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6 45.69961567697781 0.0497987121815769 6 [{I|L}V]DDK{I|L}V{M(Oxidation (M))|F}V 9 0 + 58.79 0.0 0.0 5.6173 5.6173 88.322 0.0 0.0 0.0 22.94408732588998 27.095690636129888 22.94408732588998 9.771212547196626 0 1.461758134947864 2.0 0.7059771852360797 0.0 + + [{I|L}V]DDK{I|L}V{M(Oxidation (M))|F}V;[{I|L}V]DDK{I|L}{M(Oxidation (M))|F}VV;[{I|L}V]DDK{M(Oxidation (M))|F}{I|L}VV 5.6173;4.6836;4.0852 +;-;- + 111 1 1.499 47759.7 1.0 3780 5734 9513 SUDHL4_400M_050219_2,9516 SUDHL4_400M_050219_2,9516,VLDDKLVFV True True VLDDKLVFV 53.947139 524.308154284954 1082429.25 9513.0 ENSG00000177119|ENST00000320560|ANO6;;nc|ENSG00000177119|Q4KMQ2-3|ANO6;;ENST00000426898.2_1_12:45610123-45776982:+|nuORF;;nc|ENSG00000177119|Q4KMQ2-2|ANO6;;nc|ENSG00000177119|Q4KMQ2-4|ANO6 5.5182998975118 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9517 53.953 345.0 267860.0 25 0 14577.0 + + 2142 VLPAVSLEV 9 97 926.5625025744564 925.5552261078562 1 926.5570556521416 MULTI CID FTMS 0 0 0 9513 147710.390625 0.6441723936678917 -9 0.1496200561523437 4 Unmodified _APVRRATR_ nc|ENSG00000076108|Q9UIF9|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;ENSG00000076108|ENST00000549884|BAZ2A 14.581692164780916 0.6954967302934248 6 [PA]V{I|L}VS{I|L}EV 9 -1 + 68.303 0.0 0.0 7.3796 7.3796 82.546 0.0 0.0 0.0 16.88069583530241 29.52333408639164 16.88069583530241 0.9640156839957824 0 0.4793036574208875 1.154901959985743 1.0356668758921828 0.0 [PA]V{I|L}VS{I|L}EV;[PA]V{I|L}SV{I|L}EV;[PA]V{I|L}VSE{I|L}V;[PA]V{I|L}SVE{I|L}V;[PA]{I|L}VVS{I|L}EV;[PA]V{I|L}VS[KG]GV;[PA]V{I|L}SEV{I|L}V;[PA]{I|L}VSV{I|L}EV;[PA]V{I|L}SV[KG]GV;[PA]VS{I|L}V{I|L}EV 7.3796;7.2755;7.1731;7.0689;6.8641;6.8521;6.7973;6.76;6.7479;6.7437 -;-;-;-;-;-;-;-;-;- 2561 1 1.499 66694.0 1.0 3781 5734 9513 SUDHL4_400M_050219_2,9517 SUDHL4_400M_050219_2,9517,APVRRATR False False VLPAVSLEV 53.953397 926.557055652142 1015125.375 9513.0 nc|ENSG00000076108|Q9UIF9|BAZ2A;;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;;nc|ENSG00000076108|Q9UIF9-2|BAZ2A;;ENSG00000076108|ENST00000549884|BAZ2A 1.2263935208320618 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9520 53.974 800.0 70079.0 25 0 18479.0 -1 LWKKIHRMVI 10 63 670.4054361834548 1338.7963194337094 2 670.4056274294853 MULTI CID FTMS 0 0 0 9519 97866.8984375 0.935942059434252 -1 0.0040664672851562 1 Oxidation (M) _LWKKIHRM(Oxidation (M))VI_ ENSG00000120440|ENST00000239587|TTLL2 0.4007161486938917 0.7247829448918255 6 {I|L} 1 -1 10.485 0.0 0.0 0.78313 0.0 0.0 1207.7014077899578 0.0 1207.7014077899578 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.78313 + + 5 + 1 1.499 56137.4 0.9100000262260436 3782 5736 9519 SUDHL4_400M_050219_2,9520 SUDHL4_400M_050219_2,9520,LWKKIHRMVI False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9521 53.988 800.0 156700.0 25 0 88670.0 23227 LSSVRNHQ 8 54 940.495112461473 939.487835994873 1 940.4958984255792 MULTI CID FTMS 0 0 0 9519 129676.9453125 1.0 0 0.0 2 Unmodified _LSSVRNHQ_ ENSG00000137822|ENST00000564079|TUBGCP4;ENST00000561691.5_1_15:43691337-43697409:+|nuORF;ENST00000566251.1_1_15:43696007-43697409:+|nuORF;nc|ENSG00000137822|Q9UGJ1|TUBGCP4 4.3292370932331545 0.7980541185046766 6 {I|L}M 2 7 20.969 0.0 0.0 2.232 0.0 0.0 0.0 692.3551729791624 692.3551729791624 15.48455006504028 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}M 2.232 - 24 + 1 1.499 89189.9 0.4900000095367431 3783 5736 9519 SUDHL4_400M_050219_2,9521 SUDHL4_400M_050219_2,9521,LSSVRNHQ False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9524 54.004 578.0 267690.0 25 0 25923.0 + 9212 FGGVLILIHR 10 103 562.8504048849444 1123.6862568366887 2 562.8507568240166 MULTI CID FTMS 0 0 0 9523 219299.53125 0.0489329408090888 18 -0.4064826965332031 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 46.020951573049366 0.1035046897853725 6 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR 9 5 + 120.63 0.0 0.0 10.735 10.735 94.616 0.0 0.0 0.0 97.72169341569165 21.83756131691122 21.83756131691122 9.208187539523747 0 1.6237125054200234 2.0 0.0 1.5799614645664066 {I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}{I|L}HR;{I|L}V{M(Oxidation (M))|F}N{I|L}{I|L}[RH]{I|L};{I|L}V{M(Oxidation (M))|F}GG{I|L}{I|L}[RH]{I|L} 10.735;9.9158;8.2801;7.4607 -;-;-;- 469 + 1 1.499 122087.9 1.0 3784 5738 9523 SUDHL4_400M_050219_2,9524 SUDHL4_400M_050219_2,9524,FGGVLILIHR True True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9527 54.025 800.0 224960.0 25 0 48992.0 + 8989 FATFPSSAF 9 109 974.4612376719692 973.4539612053692 1 974.4636718630792 MULTI CID FTMS 0 0 0 9526 164213.90625 0.8199918825431141 4 -0.0950469970703125 1 Unmodified _FATFPSSAF_ ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 133.70201269244603 0.0112873236905593 6 [PS]SA{M(Oxidation (M))|F}T{M(Oxidation (M))|F}A{M(Oxidation (M))|F} 9 7 + 69.113 0.0 0.0 7.0998 7.0998 86.425 0.0 0.0 0.0 9.889917747712644 34.62697726967775 9.889917747712644 4.304009240123889 0 0.5796896906561032 0.0 2.778659694992122 0.0 [PS]SA{M(Oxidation (M))|F}T{M(Oxidation (M))|F}A{M(Oxidation (M))|F};[PS]SA{M(Oxidation (M))|F}TA{M(Oxidation (M))|F}{M(Oxidation (M))|F};[PS]SA{M(Oxidation (M))|F}{M(Oxidation (M))|F}TA{M(Oxidation (M))|F};[PS]SA{M(Oxidation (M))|F}AT{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}T{M(Oxidation (M))|F}PSSA{M(Oxidation (M))|F};[PS]SA{M(Oxidation (M))|F}TE[HV];[PS]S[HV]ETA{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}TP{[CA]|SS}{M(Oxidation (M))|F}A{M(Oxidation (M))|F};{[MS]|[{M(Oxidation (M))|F}A]}TAAE{M(Oxidation (M))|F}A{M(Oxidation (M))|F};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}G{[MG]|[TS]}T{M(Oxidation (M))|F}A{M(Oxidation (M))|F} 7.0998;6.6576;6.0272;5.8347;5.3042;5.1744;4.9004;4.8661;4.6165;4.6037 -;-;-;-;+;-;-;-;-;- + 5192 1 1.499 121729.9 0.5400000214576721 3785 5740 9526 SUDHL4_400M_050219_2,9527 SUDHL4_400M_050219_2,9527,FATFPSSAF True True FATFPSSAF 54.024563 974.463671863079 5697376.5 9526.0 nc|ENSG00000204843|Q14203-3|DCTN1;;ENSG00000204843|ENST00000628224|DCTN1;;nc|ENSG00000204843|Q14203-4|DCTN1;;nc|ENSG00000204843|Q14203-2|DCTN1;;nc|ENSG00000204843|Q14203-6|DCTN1;;nc|ENSG00000204843|Q14203-5|DCTN1 7.859204610188802 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9530 54.034 114.0 485510.0 25 0 64510.0 + 9209 FGGVLILIHR 10 68 375.5693376546222 1123.6861835640666 3 375.5693847537041 MULTI CID FTMS 0 0 0 9529 422313.4375 0.0362615752358236 22 -0.5000190734863281 1 Unmodified _FGGVLILIHR_ ENST00000538954.5_1_9:124116937-124118409:-|nuORF 37.97399986684836 0.1789611706409123 6 N{I|L}{I|L}{I|L}HR 6 5 59.831 0.0 0.0 5.3245 0.0 0.0 359.2211375617223 0.0 359.2211375617223 0.0 41.41416452716277 0.0 0.0 0 0.4247425010840047 0.0 0.0 1.4436726795685342 N{I|L}{I|L}{I|L}HR 5.3245 - 82 + 1 1.499 51593.6 1.0 3786 5742 9529 SUDHL4_400M_050219_2,9530 SUDHL4_400M_050219_2,9530,FGGVLILIHR False True False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9531 54.037 177.0 226930.0 25 0 15990.0 + 20248 LLDLKPELAAQ 11 64 605.855554337379 1209.696555741558 2 605.8558837771416 MULTI CID FTMS 0 0 0 9529 270279.1875 0.0062622506167274 29 -0.6146011352539062 2 Unmodified _LLDLKPELAAQ_ REV__ENSG00000108465|ENST00000338399|CDK5RAP3;REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF;REV__nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-3|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 13.042465956692816 0.7638483625850725 6 {I|L}{I|L}{I|L}DVA 6 -1 25.368 0.0 0.0 2.0971 0.0 0.0 316.1782271981761 266.1146639459594 582.2928911441355 0.0 0.0 0.0 0.0 0 0.3252574989159953 0.0 0.0 0.0 {I|L}{I|L}{I|L}DVA 2.0971 - 178 + 1 1.499 34541.8 1.0 3787 5742 9529 SUDHL4_400M_050219_2,9531 SUDHL4_400M_050219_2,9531,LLDLKPELAAQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9532 54.046 538.0 160910.0 25 0 12032.0 + 9698 FLSELTQQL 9 117 539.7924930625163 1077.5704331918323 2 539.7930175662041 MULTI CID FTMS 0 0 0 9529 120633.8203125 0.1498560729896336 11 -0.3390350341796875 3 Unmodified _FLSELTQQL_ ENSG00000240972|ENST00000215754|MIF;ENST00000465752.1_1_22:24236661-24237189:+|nuORF 60.38955033654506 0.025866396858536 6 {[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}{I|L} 5 6 36.541 0.0 0.0 3.3911 0.0 0.0 0.0 485.2361185768513 485.2361185768513 3.26197587275935 0.0 0.0 0.0 0 0.0 0.8860566476931632 1.3243923658886183 0.0 {[QN]|[E{I|L}]|[KN]}S{M(Oxidation (M))|F}{I|L} 3.3911 - 1691 1 1.499 71996.6 1.0 3788 5742 9529 SUDHL4_400M_050219_2,9532 SUDHL4_400M_050219_2,9532,FLSELTQQL True True FLSELTQQL 54.04648 539.793017566204 4559178.0 9529.0 ENST00000465752.1_1_22:24236661-24237189:+|nuORF;;ENSG00000240972|ENST00000215754|MIF 5.941739559173584 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9534 54.063 800.0 110720.0 25 0 10863.0 + 15091 IMLEALERV 9 107 537.3044657716225 1072.594378610045 2 537.3052245974541 MULTI CID FTMS 0 0 0 9533 52109.46875 0.0315155070379528 22 -0.4861907958984375 1 Unmodified _IMLEALERV_ ENSG00000143977|ENST00000272348|SNRPG;nc|ENSG00000224543|A8MWD9|SNRPGP15 28.49450938151212 0.1686335738423394 6 {I|L}M{I|L}EA{I|L}ERV 9 0 + 77.089 0.0 0.0 7.1871 7.1871 63.858 0.0 0.0 0.0 55.43305028184122 6.382805414149786 6.382805414149786 0.0 0 0.8494850021680094 2.0 0.0 0.0 + + {I|L}M{I|L}EA{I|L}ERV;{I|L}M{I|L}AE{I|L}ERV;{I|L}M{I|L}AE{I|L}[RD]{I|L};{I|L}M{I|L}EA{I|L}[RD]{I|L};{I|L}A{I|L}ME{I|L}ERV;{I|L}A{I|L}ME{I|L}[RD]{I|L};{I|L}MV[DV]{I|L}ERV;{I|L}MV[DV]{I|L}[RD]{I|L};[{I|L}A]ER[{M(Oxidation (M))|F}V]{I|L}[EP];{[QN]|[E{I|L}]|[KN]}AR[{M(Oxidation (M))|F}V]{I|L}[EP] 7.1871;7.1871;6.5457;6.5457;5.7065;5.0651;4.7623;4.1209;3.1769;2.9029 +;-;-;-;-;-;-;-;-;- + 558 + 1 1.499 72224.0 0.3899999856948852 3789 5743 9533 SUDHL4_400M_050219_2,9534 SUDHL4_400M_050219_2,9534,IMLEALERV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9535 54.076 731.0 182020.0 25 0 32834.0 + 20264 LLDPSVFHV 9 107 513.7847351337072 1025.5549173342142 2 513.7846557497978 MULTI CID FTMS 0 0 0 9533 126963.1640625 0.5461690430591167 -3 0.038330078125 2 Unmodified _LLDPSVFHV_ ENSG00000184967|ENST00000330579|NOC4L;ENST00000538784.2_1_12:132635515-132636943:+|nuORF 70.71552829651908 0.0208223590022201 6 {I|L}{I|L}DPSV{M(Oxidation (M))|F}HV 9 0 + 88.643 0.0 0.0 8.6434 8.6434 88.352 0.0 0.0 0.0 36.47817481888637 3.679767852945943 3.679767852945943 3.679767852945943 0 0.8807196863200843 2.0 0.805462187404089 0.0 + + {I|L}{I|L}DPSV{M(Oxidation (M))|F}HV;{I|L}{I|L}DPSV{M(Oxidation (M))|F}VH;{I|L}{I|L}DV[PS]{M(Oxidation (M))|F}HV;{I|L}{I|L}DPSVH{M(Oxidation (M))|F}V;{I|L}{I|L}DV[PS]{M(Oxidation (M))|F}VH;{I|L}{I|L}DV[PS]H{M(Oxidation (M))|F}V;{I|L}{I|L}DT{I|L}{[ES]|[DT]|[{I|L}C]}HV;{I|L}{I|L}DPGE[RN]{I|L};{I|L}{I|L}DT{I|L}{[ES]|[DT]|[{I|L}C]}VH;{I|L}{I|L}DPS[WK][PA] 8.6434;8.2846;7.9669;7.8194;7.6081;7.1429;6.0806;5.7218;5.7218;5.5399 +;-;-;-;-;-;-;-;-;- + 1006 + 1 1.499 103698.0 1.0 3790 5743 9533 SUDHL4_400M_050219_2,9535 SUDHL4_400M_050219_2,9535,LLDPSVFHV True True LLDPSVFHV 54.075551 513.784655749798 1397915.0 9533.0 ENSG00000184967|ENST00000330579|NOC4L;;ENST00000538784.2_1_12:132635515-132636943:+|nuORF 7.980878035227458 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9536 54.089 800.0 74553.0 25 0 5390.6 + 17305 KLSEIPLTL 9 92 507.3157817690044 1012.6170106048088 2 507.3159973025322 MULTI CID FTMS 0 0 0 9533 92533.5 0.339011281210519 13 -0.3515815734863281 3 Unmodified _KLSEIPLTL_ ENSG00000009954|ENST00000339594|BAZ1B;nc|ENSG00000009954|Q9UIG0-2|BAZ1B 49.55428908609986 0.0413471690215031 6 [{I|L}T]DK{I|L}P{I|L}T{I|L} 9 3 + 68.514 0.0 0.0 6.766 6.766 95.543 0.0 0.0 0.0 14.717262228329568 35.27024297852081 14.717262228329568 68.51396253818523 0 0.9247425010840048 1.3979400086720375 0.6747425010840047 0.0 [{I|L}T]DK{I|L}P{I|L}T{I|L} 6.766 - 207 1 1.499 50593.9 0.8899999856948853 3791 5743 9533 SUDHL4_400M_050219_2,9536 SUDHL4_400M_050219_2,9536,KLSEIPLTL True True KLSEIPLTL 54.08937 507.315997302532 3198151.25 9533.0 ENSG00000009954|ENST00000339594|BAZ1B;;nc|ENSG00000009954|Q9UIG0-2|BAZ1B 5.002092281977336 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9537 54.103 800.0 196290.0 25 0 35191.0 + 44313 YLNDGLWHM 9 121 574.7632108064398 1147.5118686796795 2 574.7631713747978 MULTI CID FTMS 0 0 0 9533 86936.9140625 0.4702182270118021 -2 0.0219268798828125 4 Unmodified _YLNDGLWHM_ ENSG00000101898|ENST00000394552|MCTS2;ENSG00000232119|ENST00000371317|MCTS1;ENST00000487133.1_1_X:119742243-119746116:+|nuORF;nc|ENSG00000232119|Q9ULC4-2|MCTS1;nc|ENSG00000232119|Q9ULC4-3|MCTS1 57.47134341890925 0.0274820932774257 6 Y{I|L}NDG{I|L}WMH 9 2 + 83.424 0.0 0.0 7.27 7.27 84.51 0.0 0.0 0.0 36.47817481888637 2.319490765206808 2.319490765206808 2.319490765206808 0 0.7614393726401688 2.0 0.3494850021680094 0.3807196863200844 Y{I|L}NDG{I|L}WMH;Y{I|L}NDG{I|L}WHM;Y{I|L}NDG{I|L}MWH;Y{I|L}GGDG{I|L}WMH;Y{I|L}GGDG{I|L}WHM;Y{I|L}GGDG{I|L}MWH;Y{I|L}ND[HC]DR{I|L};Y{I|L}GGD[HC]DR{I|L};Y{I|L}ND[HC][QA][KG];Y{I|L}[R{M(Oxidation (M))|F}]WN{[{M(Oxidation (M))|F}C]|[YS]} 7.27;7.0679;6.7453;6.1358;5.9336;5.6111;5.4086;4.6062;4.2415;3.9846 -;+;-;-;-;-;-;-;-;- + 1326 + 1 1.499 119031.4 0.3799999952316284 3792 5743 9533 SUDHL4_400M_050219_2,9537 SUDHL4_400M_050219_2,9537,YLNDGLWHM True True YLNDGLWHM 54.103203 574.763171374798 984320.0625 9533.0 nc|ENSG00000232119|Q9ULC4-2|MCTS1;;ENSG00000101898|ENST00000394552|MCTS2;;ENST00000487133.1_1_X:119742243-119746116:+|nuORF;;ENSG00000232119|ENST00000371317|MCTS1;;nc|ENSG00000232119|Q9ULC4-3|MCTS1 8.106895128885904 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9539 54.111 223.0 269110.0 25 0 21754.0 19580 LFVNLKNVN 9 87 530.8113386176387 1059.6081243020774 2 530.8098022341728 MULTI CID FTMS 0 0 0 9538 36359.0078125 0.0825119874072741 9 -0.2644577026367187 1 Unmodified _LFVNLKNVN_ ENSG00000145794|ENST00000503335|MEGF10;ENST00000515622.1_1_5:126783361-126801299:+|nuORF 24.67388899826682 0.2172451872415813 6 [{I|L}V]K{M(Oxidation (M))|F}[TP]N{[QN]|[E{I|L}]|[KN]} 9 6 + 36.875 0.0 0.0 3.48 3.48 74.958 0.0 0.0 0.0 5.778324880759477 5.526421446773362 5.526421446773362 3.679767852945943 0 0.3807196863200844 1.6989700043360187 0.0 0.4247425010840047 [{I|L}V]K{M(Oxidation (M))|F}[TP]N{[QN]|[E{I|L}]|[KN]};[{I|L}V]KV[C(Carbamidomethyl (C))S]{I|L}{[QN]|[E{I|L}]|[KN]};[{I|L}V]{M(Oxidation (M))|F}K[TP]N{[QN]|[E{I|L}]|[KN]};[{I|L}V]{M(Oxidation (M))|F}[VG]{I|L}GN{[QN]|[E{I|L}]|[KN]};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}N[TP]KKNV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NG{I|L}[VG]KNV;[{I|L}V]K{M(Oxidation (M))|F}[TP]GG{[QN]|[E{I|L}]|[KN]};[{I|L}V]KV{M(Oxidation (M))|F}{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[HG]|PP};[{I|L}V]{M(Oxidation (M))|F}K[TP]GG{[QN]|[E{I|L}]|[KN]};[{I|L}V]K{M(Oxidation (M))|F}V{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}{[HG]|PP} 3.48;3.1327;3.0297;2.9866;2.9347;2.8915;2.611;2.602;2.1607;2.1517 -;-;-;-;-;-;-;-;-;- 929 1 1.499 54637.4 1.0 3793 5744 9538 SUDHL4_400M_050219_2,9539 SUDHL4_400M_050219_2,9539,LFVNLKNVN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9540 54.125 800.0 151660.0 25 0 7108.3 33173 SFADGFVL 8 115 855.4243766851552 854.4171002185551 1 855.4243041872978 MULTI CID FTMS 0 0 0 9538 83457.0078125 0.3794560837847793 3 -0.1224708557128906 2 Unmodified _SFADGFVL_ ENSG00000197885|ENST00000425478|NKIRAS1 34.18733598223924 0.3315367612694167 6 {[DA]|[EG]}{M(Oxidation (M))|F}YQV{I|L} 7 5 + 72.594 0.0 0.0 8.4963 8.4963 96.435 0.0 0.0 0.0 18.05481414087505 43.76454067710971 18.05481414087505 17.072807136214003 0 1.2728787452803376 0.8860566476931632 0.6307196863200843 0.7742275032520141 {[DA]|[EG]}{M(Oxidation (M))|F}YQV{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}W{I|L};[YQ]{M(Oxidation (M))|F}{[DA]|[EG]}V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y{M(Oxidation (M))|F}{[DA]|[EG]}{I|L};[Y{M(Oxidation (M))|F}]{[DA]|[EG]}QV{I|L};[Y{M(Oxidation (M))|F}]Q{[DA]|[EG]}V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{[DA]|[EG]}[Y{M(Oxidation (M))|F}]{I|L};{[DA]|[EG]}{M(Oxidation (M))|F}V[YQ]{I|L};[YQ]{M(Oxidation (M))|F}V{[DA]|[EG]}{I|L} 8.4963;6.4981;6.1375;5.7752;5.4157;5.1812;4.8005;4.4249;4.0558;3.7965 -;-;-;-;-;-;-;-;-;- 587 1 1.499 84676.3 0.5400000214576721 3794 5744 9538 SUDHL4_400M_050219_2,9540 SUDHL4_400M_050219_2,9540,SFADGFVL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9541 54.139 800.0 84417.0 25 0 17933.0 + 45141 YQDPSVLYI 9 80 549.2799864964836 1096.5454200597671 2 549.2792236208916 MULTI CID FTMS 0 0 0 9538 89616.8125 1.0 0 0.0 3 Unmodified _YQDPSVLYI_ ENSG00000061273|ENST00000080059|HDAC7;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;ENST00000471235.1_1_12:48181791-48181944:-|nuORF;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7 24.020572477871973 0.2255576514309169 6 [PS]V{I|L}DQYY{I|L} 9 6 + 38.162 0.0 0.0 3.4802 3.4802 80.902 0.0 0.0 0.0 13.019447680197146 17.227635219720895 13.019447680197146 9.208187539523752 0 0.7742275032520141 0.0 1.3129529932484498 0.0 [PS]V{I|L}DQYY{I|L};[PS]V{I|L}D[AG]YY{I|L};[PS]V{I|L}Y{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L};[{I|L}V][PS]DQYY{I|L};[PS]D[{I|L}V]QYY{I|L};[YQ]AE[TP]{I|L}Y{I|L};[{I|L}V][PS]D[AG]YY{I|L};[{I|L}V][PS]Y{[QD]|[EN]|[WG]|[KD]|[RS]}Y{I|L};[PS]D[{I|L}V][AG]YY{I|L} 3.4802;2.6405;2.6014;1.692;1.648;1.6221;0.85222;0.81319;0.80824 -;-;-;-;-;-;-;-;- 207 1 1.499 56641.3 0.3700000047683716 3795 5744 9538 SUDHL4_400M_050219_2,9541 SUDHL4_400M_050219_2,9541,YQDPSVLYI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9542 54.144 297.0 252040.0 25 0 50214.0 -1 0 84 964.96593485235 1927.9173167715 2 964.968798816204 MULTI CID FTMS 0 0 0 9538 167956.09375 1.0 0 0.0 4 6 S[YG]EA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Y{I|L}P[WP] 13 -1 29.271 0.0 0.0 1.5183 0.0 0.0 376.1747392023095 0.0 376.1747392023095 0.0 6.902473743226203 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 S[YG]EA{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}Y{I|L}P[WP] 1.5183 - 420 + 1 1.499 57930.8 1.0 3796 5744 9538 SUDHL4_400M_050219_2,9542 SUDHL4_400M_050219_2,9542, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9543 54.158 800.0 194700.0 25 0 7668.9 + -1 ALTSVVVTL 9 135 902.9116523670504 1803.8087518009008 2 902.9113647341728 MULTI CID FTMS 0 0 0 9538 142285.65625 1.0 0 0.0 5 ENST00000473078.1_1_7:92300738-92355023:-|nuORF;ENSG00000105810|ENST00000424848|CDK6 6 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 108.5 0.0 0.0 6.0151 6.0151 60.762 0.0 0.0 0.0 4.489700043360188 5.059798844836891 4.489700043360188 0.0 0 1.0924778212679485 1.3010299956639813 1.348136244196333 0.805462187404089 {[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}YKV{I|L};[YQ]VCEAQQDA{M(Oxidation (M))|F}YQV{I|L};[YQ]VCEAQQDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCEA[AG]QDA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQQDA{M(Oxidation (M))|F}Y[AG]V{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCEA[AG]QDA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQ[AG]DA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}YCEAQ[AG]DA{M(Oxidation (M))|F}YKV{I|L};[YQ]VCEAQ[AG]DA{M(Oxidation (M))|F}YQV{I|L} 6.0151;6.0151;5.7662;5.7662;5.5145;5.5145;5.5145;5.5145;5.5145;5.2656 -;-;-;-;-;-;-;-;-;- 2960 1 1.499 108802.0 0.959999978542328 3797 5744 9538 SUDHL4_400M_050219_2,9543 SUDHL4_400M_050219_2,9543, False False ALTSVVVTL 54.158292 902.911364734173 2076801.375 9538.0 ENST00000473078.1_1_7:92300738-92355023:-|nuORF;;ENSG00000105810|ENST00000424848|CDK6 0.9769264062245688 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9545 54.163 73.0 729430.0 25 0 56857.0 + 17286 KLQEFLQTL 9 92 560.3242165013256 1118.6338800694512 2 560.3243286013603 MULTI CID FTMS 0 0 0 9544 594896.875 0.4032605539337133 2 -0.0673828125 1 Unmodified _KLQEFLQTL_ ENSG00000140525|ENST00000310775|FANCI;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;nc|ENSG00000140525|Q9NVI1-1|FANCI;nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-4|FANCI 66.45667989310934 0.0225072657982126 6 [{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}QT{I|L} 10 3 + 83.039 0.0 0.0 7.4233 7.4233 87.894 0.0 0.0 0.0 5.17983338518107 7.269987279362624 5.17983338518107 5.17983338518107 0 0.5 1.3979400086720375 1.4361818737241734 0.7302046884880937 [{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}QT{I|L};[AG]{I|L}KE{M(Oxidation (M))|F}{I|L}QT{I|L};[{I|L}T]Q{M(Oxidation (M))|F}[VG]{I|L}QT{I|L};[AG]{I|L}{M(Oxidation (M))|F}EK{I|L}QT{I|L};[{I|L}T]Q[VG]{M(Oxidation (M))|F}{I|L}[AG]T{I|L};[{I|L}T][CS]{I|L}K{I|L}QT{I|L};[AG]{I|L}EK{M(Oxidation (M))|F}{I|L}QT{I|L};[AG]{I|L}E{M(Oxidation (M))|F}K{I|L}QT{I|L};[AG]E{M(Oxidation (M))|F}{I|L}K{I|L}QT{I|L};[AG]{I|L}T[VG]{M(Oxidation (M))|F}{I|L}QT{I|L} 7.4233;6.9602;6.8634;6.8154;6.604;6.4797;6.2401;6.2185;6.2004;6.1763 -;-;-;-;-;-;-;-;-;- 1520 1 1.499 46639.4 1.0 3798 5745 9544 SUDHL4_400M_050219_2,9545 SUDHL4_400M_050219_2,9545,KLQEFLQTL True True KLQEFLQTL 54.163075 560.32432860136 15023592.0 9544.0 nc|ENSG00000140525|Q9NVI1-1|FANCI;;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;;ENSG00000140525|ENST00000310775|FANCI;;nc|ENSG00000140525|Q9NVI1-4|FANCI;;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;;nc|ENSG00000140525|Q9NVI1-2|FANCI 5.036361376444499 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9546 54.177 800.0 210640.0 25 0 19000.0 -1 0 92 634.0279077837886 1899.0618939515657 3 634.3622924685478 MULTI CID FTMS 0 0 0 9544 66469.5859375 0.3892404727409742 3 -0.0921707153320312 2 6 {I|L}{I|L}WV 4 -1 55.918 0.0 0.0 2.9445 0.0 0.0 0.0 1384.7313681308642 1384.7313681308642 23.521825181113627 0.0 0.0 0.0 0 0.8494850021680094 1.6989700043360187 0.0 0.0 {I|L}{I|L}WV 2.9445 - 324 + 1 1.499 125472.4 0.449999988079071 3799 5745 9544 SUDHL4_400M_050219_2,9546 SUDHL4_400M_050219_2,9546, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9548 54.184 169.0 443590.0 25 0 29283.0 + 40766 VLKVFLENV 9 115 530.8248681684922 1059.6351834037844 2 530.8253661990166 MULTI CID FTMS 0 0 0 9547 363405.28125 0.9531248053420374 -1 0.0186195373535156 1 Unmodified _VLKVFLENV_ ENSG00000158406|ENST00000377727|H4C8;ENSG00000197061|ENST00000377803|H4C3;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197837|ENST00000539745|H4C16;ENSG00000270276|ENST00000579512|H4C15;ENSG00000270882|ENST00000578186|H4C14;ENSG00000273542|ENST00000611927|H4C12;ENSG00000274618|ENST00000244537|H4C6;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000276966|ENST00000615164|H4C5;ENSG00000277157|ENST00000614247|H4C4;ENSG00000278637|ENST00000617569|H4C1;ENSG00000278705|ENST00000377745|H4C2 75.76082778847304 0.0188720312721366 6 V{I|L}[KC]EKKN 8 5 72.032 0.0 0.0 6.7978 0.0 0.0 0.0 114.05643640689686 114.05643640689686 46.28189926746487 0.0 0.0 0.0 0 0.7059771852360797 2.0 0.3494850021680094 1.174742501084005 V{I|L}[KC]EKKN 6.7978 - 4342 + 1 1.499 68344.8 1.0 3800 5746 9547 SUDHL4_400M_050219_2,9548 SUDHL4_400M_050219_2,9548,VLKVFLENV True True VLKVFLENV 54.184098 530.825366199017 3778094.25 9547.0 ENSG00000274618|ENST00000244537|H4C6;;ENSG00000278705|ENST00000377745|H4C2;;ENSG00000158406|ENST00000377727|H4C8;;ENSG00000275126|ENST00000618305|H4C13;;ENSG00000273542|ENST00000611927|H4C12;;ENSG00000197061|ENST00000377803|H4C3;;ENSG00000276966|ENST00000615164|H4C5;;ENSG00000278637|ENST00000617569|H4C1;;ENSG00000270882|ENST00000578186|H4C14;;ENSG00000197238|ENST00000355057|H4C11;;ENSG00000277157|ENST00000614247|H4C4;;ENSG00000276180|ENST00000615353|H4C9;;ENSG00000270276|ENST00000579512|H4C15;;ENSG00000197837|ENST00000539745|H4C16 7.371529738108317 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9549 54.198 800.0 87550.0 25 0 1945.5 -1 0 105 1187.560034567084 0 1187.555834949017 PEAK CID FTMS 0 0 0 9547 78749.5078125 0.9890098536609488 1 -0.0487632751464843 2 6 ANDQ 4 -1 9.0165 0.0 0.0 0.37995 0.0 0.0 1141.5505368081929 800.3618868463499 1941.9124236545424 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 ANDQ 0.37995 - 160 + 1 1.499 44507.9 0.4300000071525574 3801 5746 9547 SUDHL4_400M_050219_2,9549 SUDHL4_400M_050219_2,9549, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9550 54.212 800.0 132700.0 25 0 28512.0 + -1 LTYMPSVSL 9 90 1010.5262525663252 0 1010.526538074017 PEAK CID FTMS 0 0 0 9547 124124.6953125 1.0 0 0.0 3 nc|ENSG00000122591|Q9BYI3-3|HYCC1;ENSG00000122591|ENST00000432176|HYCC1 6 SVSPMY 6 -1 18.492 0.0 0.0 0.9159 0.0 0.0 1140.620668119175 211.10938440494377 1351.7300525241187 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 SVSPMY 0.9159 - 1467 + 1 1.499 74900.3 0.5199999809265137 3802 5746 9547 SUDHL4_400M_050219_2,9550 SUDHL4_400M_050219_2,9550, False False LTYMPSVSL 54.211827 1010.52653807402 668622.875 9547.0 nc|ENSG00000122591|Q9BYI3-3|HYCC1;;ENSG00000122591|ENST00000432176|HYCC1 6.460379282633464 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9551 54.226 800.0 132070.0 25 0 9075.9 -1 0 123 909.4259063984532 1816.837259863706 2 909.4276000857352 MULTI CID FTMS 0 0 0 9547 86885.28125 1.0 0 0.0 4 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[MD]AQQNA{M(Oxidation (M))|F}YQV{I|L} 15 -1 + 90.415 0.0 0.0 4.9765 4.9765 57.089 0.0 0.0 0.0 7.843181179205061 8.300111522114094 7.843181179205061 0.0 0 0.9247425010840048 1.5228787452803376 0.0 1.086696871556164 {[QV]|[N{I|L}]|[RA]|[KV]}Y[MD]AQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[MD]AQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]{[ES]|[DT]|[{I|L}C]}EAQQNA{M(Oxidation (M))|F}YKV{I|L};[YQ]{[ES]|[DT]|[{I|L}C]}EAQQNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[MD]AQ[AG]NA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[MD]A[AG]QNA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[MD]A[AG]QNA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[MD]AQ[AG]NA{M(Oxidation (M))|F}YQV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[MD]AQQGGA{M(Oxidation (M))|F}YKV{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}Y[MD]AQQGGA{M(Oxidation (M))|F}YQV{I|L} 4.9765;4.9765;4.5448;4.5448;4.4794;4.4794;4.4794;4.4794;4.4794;4.4794 -;-;-;-;-;-;-;-;-;- 2073 1 1.499 75602.6 0.4300000071525574 3803 5746 9547 SUDHL4_400M_050219_2,9551 SUDHL4_400M_050219_2,9551, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9553 54.242 800.0 140300.0 25 0 5057.9 -1 0 126 1164.5378885458315 3490.5918362376947 3 1165.208544909954 MULTI CID FTMS 0 0 0 9552 154779.21875 0.1832238513604096 15 -0.2510528564453125 1 6 VQY{M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 14 -1 51.112 0.0 0.0 1.4643 0.0 0.0 1860.8792390660733 0.0 1860.8792390660733 0.0 1.524494976091901 0.0 0.0 0 0.0 0.0 0.0 0.0 VQY{M(Oxidation (M))|F}ANQQA[CS]M[Q{I|L}] 1.4643 - 2463 + 1 1.499 72226.8 0.8700000047683716 3804 5747 9552 SUDHL4_400M_050219_2,9553 SUDHL4_400M_050219_2,9553, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9554 54.25 473.0 173020.0 25 0 13887.0 + 1646 ALMPVLNQV 9 113 492.7810847905663 983.5476166479326 2 492.7808105349541 MULTI CID FTMS 0 0 0 9552 88472.828125 0.3294822002856855 -11 0.2682113647460937 2 Unmodified _ALMPVLNQV_ ENSG00000223496|ENST00000435634|EXOSC6 56.541270873467816 0.0279970378729908 6 [VP]{I|L}NQM 6 4 35.992 0.0 0.0 3.6594 0.0 0.0 0.0 298.17527713060764 298.17527713060764 6.404243831634979 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.0 0.535666875892183 [VP]{I|L}NQM 3.6594 - 794 1 1.499 70955.1 1.0 3805 5747 9552 SUDHL4_400M_050219_2,9554 SUDHL4_400M_050219_2,9554,ALMPVLNQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9557 54.271 800.0 197980.0 25 0 11227.0 + 34284 SLQSTILGV 9 119 917.529754674126 916.522478207526 1 917.5291625857352 MULTI CID FTMS 0 0 0 9556 85504.609375 0.0408323960495473 -12 0.2668037414550781 1 Unmodified _SLQSTILGV_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 53.832793166522166 0.0319663582346103 6 {[TV]|[{I|L}S]}PNS{I|L}{I|L}G 8 4 47.068 0.0 0.0 5.1355 0.0 0.0 0.0 132.06877882691984 132.06877882691984 13.583946152345804 0.0 0.0 0.0 0 0.0 1.0969100130080565 1.829689690656103 0.0 {[TV]|[{I|L}S]}PNS{I|L}{I|L}G 5.1355 - 3131 1 1.499 103504.2 0.5099999904632568 3806 5749 9556 SUDHL4_400M_050219_2,9557 SUDHL4_400M_050219_2,9557,SLQSTILGV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9558 54.285 800.0 194090.0 25 0 13258.0 + 45142 YQDPSVLYI 9 130 1097.552329041623 1096.5450525750227 1 1097.553637683392 MULTI CID FTMS 0 0 0 9556 108595.359375 0.3222158161206959 5 -0.1170425415039062 2 Unmodified _YQDPSVLYI_ ENSG00000061273|ENST00000080059|HDAC7;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;ENST00000471235.1_1_12:48181791-48181944:-|nuORF;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7 78.7280429016045 0.0178249292250809 6 [PS]V{I|L}YDQY{I|L} 9 6 + 88.739 0.0 0.0 8.0926 8.0926 90.358 0.0 0.0 0.0 22.50431147411433 64.5311114716576 22.50431147411433 6.817496819840656 0 0.3054621874040891 0.0 2.646591250700361 0.7614393726401688 [PS]V{I|L}YDQY{I|L};[PS]V{I|L}DYQY{I|L};[PS]V{I|L}YQDY{I|L};[PS]V{I|L}DQYY{I|L};[PS]VY{I|L}DQY{I|L};[PS]VD{I|L}YQY{I|L};[PS]VD{I|L}QYY{I|L};[PS]VD[YQ]{I|L}Y{I|L};[PS]VY{I|L}QDY{I|L};[PS]V{I|L}YDYQ{I|L} 8.0926;7.4709;7.4535;7.3825;7.3324;6.9904;6.9021;6.7507;6.6933;6.6444 -;-;-;-;-;-;-;-;-;- 3098 1 1.499 98220.8 0.5899999737739563 3807 5749 9556 SUDHL4_400M_050219_2,9558 SUDHL4_400M_050219_2,9558,YQDPSVLYI True True YQDPSVLYI 54.284749 1097.55363768339 2545201.6875 9556.0 nc|ENSG00000061273|Q8WUI4-3|HDAC7;;ENST00000459625.5_1_12:48179068-48183703:-|nuORF;;nc|ENSG00000061273|Q8WUI4-2|HDAC7;;nc|ENSG00000061273|Q8WUI4|HDAC7;;nc|ENSG00000061273|Q8WUI4-6|HDAC7;;nc|ENSG00000061273|Q8WUI4-10|HDAC7;;nc|ENSG00000061273|Q8WUI4-7|HDAC7;;ENST00000471235.1_1_12:48181791-48181944:-|nuORF;;ENSG00000061273|ENST00000080059|HDAC7;;nc|ENSG00000061273|Q8WUI4-4|HDAC7;;nc|ENSG00000061273|Q8WUI4-9|HDAC7;;nc|ENSG00000061273|Q8WUI4-8|HDAC7 7.068342844645183 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9559 54.299 800.0 46865.0 25 0 2987.5 -1 0 87 1127.9564438588225 0 1127.877246081829 PEAK CID FTMS 0 0 0 -1 0 3 6 G 1 -1 4.6041 0.0 0.0 0.20427 0.0 0.0 1674.62607023542 519.2371309869749 2193.8632012223948 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.20427 - 9 + 1 1.499 31804.9 0.550000011920929 3808 5749 9556 SUDHL4_400M_050219_2,9559 SUDHL4_400M_050219_2,9559, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9560 54.311 683.0 324020.0 25 0 53210.0 + 44342 YLPPGFLSA 9 176 964.5130460011604 963.5057695345604 1 964.5139037966728 MULTI CID FTMS 0 0 0 9556 89573.1953125 0.1236104860408416 34 -0.5363693237304688 4 Unmodified _YLPPGFLSA_ ENSG00000072310|ENST00000261646|SREBF1;ENST00000395756.5_1_17:17715938-17721122:-|nuORF;nc|ENSG00000072310|P36956-4|SREBF1 30.22481116460888 0.1466181017706357 6 [Y{I|L}]PPH 5 5 26.427 0.0 0.0 2.7428 0.0 0.0 0.0 353.18317590885005 353.18317590885005 -2.2353819582675563 0.0 -2.2353819582675563 0.0 0 0.5 0.8239087409443188 0.0 0.0 [Y{I|L}]PPH 2.7428 - 2068 + 1 1.499 134562.5 1.0 3809 5749 9556 SUDHL4_400M_050219_2,9560 SUDHL4_400M_050219_2,9560,YLPPGFLSA False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9562 54.323 464.0 179510.0 25 0 12104.0 + 28521 PTLQRRLQQA 10 100 605.855554337379 1209.696555741558 2 605.8557617068291 MULTI CID FTMS 0 0 0 9561 95574.34375 0.0022144157625594 37 -0.5047264099121094 1 Unmodified _PTLQRRLQQA_ REV__CON__Q32PJ2 29.081581746732265 0.3152867722954398 6 [TP]AAVQ[RV]A 9 -1 41.784 0.0 0.0 3.4541 0.0 0.0 0.0 313.1521205475096 313.1521205475096 -1.4972275225965743 0.0 -1.4972275225965743 0.0 0 0.3252574989159953 1.2218487496163564 1.3001648626366045 0.0 [TP]AAVQ[RV]A 3.4541 - 1582 1 1.59 63879.3 1.0 3810 5750 9561 SUDHL4_400M_050219_2,9562 SUDHL4_400M_050219_2,9562,PTLQRRLQQA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9563 54.326 142.0 597780.0 25 0 102470.0 + 34051 SLLDLEQKL 9 95 529.8084384991846 1057.6023240651691 2 529.8082153201103 MULTI CID FTMS 0 0 0 9561 163319.609375 0.6230700170383038 -1 0.0560302734375 2 Unmodified _SLLDLEQKL_ ENSG00000034693|ENST00000367591|PEX3 57.72198328787511 0.0273433238377839 6 {[TV]|[{I|L}S]}{I|L}D{I|L}EQK{I|L} 9 0 + 82.63 0.0 0.0 7.8129 7.8129 92.689 0.0 0.0 0.0 55.51660967055859 9.87765543582988 9.87765543582988 9.208187539523747 0 1.079689690656103 2.0 0.7742275032520141 0.4247425010840047 + + {[TV]|[{I|L}S]}{I|L}D{I|L}EQK{I|L};{[TV]|[{I|L}S]}{I|L}D{I|L}E[AG]K{I|L};{[TV]|[{I|L}S]}{I|L}DRRW{I|L};{[TV]|[{I|L}S]}{I|L}Q[R{M(Oxidation (M))|F}][VP]V;[{I|L}P][KC][QT]QK{I|L};[{I|L}P]{[C(Carbamidomethyl (C))T]|[{M(Oxidation (M))|F}N]}[KA]QK{I|L} 7.8129;6.9423;4.8619;2.6322;0.90767;0.78954 +;-;-;-;-;- + 1235 + 1 1.59 73352.9 1.0 3811 5750 9561 SUDHL4_400M_050219_2,9563 SUDHL4_400M_050219_2,9563,SLLDLEQKL True True SLLDLEQKL 54.325514 529.80821532011 1367656.375 9561.0 ENSG00000034693|ENST00000367591|PEX3 4.819407939910889 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9564 54.336 573.0 70475.0 25 0 1990.3 -1 0 75 1118.0273902835083 0 1118.426806628704 PEAK CID FTMS 0 0 0 -1 0 3 6 {I|L} 1 -1 6.9897 0.0 0.0 0.31287 0.0 0.0 1174.2085148426042 943.738901006506 2117.9474158491103 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.31287 - 13 + 1 1.59 32709.7 1.0 3812 5750 9561 SUDHL4_400M_050219_2,9564 SUDHL4_400M_050219_2,9564, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9565 54.349 800.0 37530.0 25 0 2590.4 -1 0 74 1078.0957433960125 0 1078.141040027142 PEAK CID FTMS 0 0 0 -1 0 4 6 H 1 -1 2.4743 0.0 0.0 0.11486 0.0 0.0 1207.702642942612 806.3726290338499 2014.0752719764616 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.11486 - 5 + 1 1.59 25329.1 0.4600000083446502 3813 5750 9561 SUDHL4_400M_050219_2,9565 SUDHL4_400M_050219_2,9565, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9568 54.364 434.0 229040.0 25 0 17738.0 + 1909 AMAEMVLQV 9 113 496.2512482106157 990.4879434880312 2 496.2513305544853 MULTI CID FTMS 0 0 0 9567 155174.15625 1.0 0 0.0 1 Unmodified _AMAEMVLQV_ ENSG00000010292|ENST00000315579|NCAPD2 60.38955033654506 0.025866396858536 6 {[DS]|[MA]|[CV]|TT}EAMV 6 5 40.01 0.0 0.0 4.0394 0.0 0.0 0.0 355.19765631746424 355.19765631746424 13.570006276765485 0.0 0.0 0.0 0 0.3807196863200844 1.6989700043360187 0.2302046884880938 0.0 {[DS]|[MA]|[CV]|TT}EAMV 4.0394 - 651 1 1.59 79202.5 1.0 3814 5752 9567 SUDHL4_400M_050219_2,9568 SUDHL4_400M_050219_2,9568,AMAEMVLQV True True AMAEMVLQV 54.363593 496.251330554485 975766.8125 9567.0 ENSG00000010292|ENST00000315579|NCAPD2 6.321946461995442 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9569 54.368 212.0 64228.0 25 0 7035.8 -1 0 36 1110.513062346947 0 1110.731372058392 PEAK CID FTMS 0 0 0 -1 0 2 6 D 1 -1 4.6041 0.0 0.0 0.20748 0.0 0.0 1581.7238653171378 519.2276095025999 2100.951474819737 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.20748 - 2 + 1 1.59 18566.1 1.0 3815 5752 9567 SUDHL4_400M_050219_2,9569 SUDHL4_400M_050219_2,9569, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9572 54.38 335.0 245620.0 25 0 49738.0 + 20294 LLDVPTAAV 9 113 898.5228806816592 897.5156042150592 1 898.5258056521416 MULTI CID FTMS 0 0 0 9571 92952.5078125 0.6177529075804776 1 -0.0224990844726562 1 Unmodified _LLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 54.773552608820026 0.0299037012502309 6 [TP]A{I|L}{NN|[MP]|[D{I|L}]|[EV]}VAV 9 6 + 55.851 0.0 0.0 6.2229 6.2229 82.42 0.0 0.0 0.0 7.699239388409637 6.6503780424059045 6.6503780424059045 2.895906230238125 0 0.0 0.6777807052660807 1.3209991640913 0.0 [TP]A{I|L}{NN|[MP]|[D{I|L}]|[EV]}VAV;[TP]AAV{[QN]|[E{I|L}]|[KN]}VV;[TP]A{I|L}{NN|[MP]|[D{I|L}]|[EV]}AVV;[TP]AA{I|L}{NN|[MP]|[D{I|L}]|[EV]}VV;{I|L}{I|L}DV[TP]AAV;[TP]AAV{NN|[MP]|[D{I|L}]|[EV]}{I|L}V;[TP]A{I|L}{NN|[MP]|[D{I|L}]|[EV]}G{I|L}V;[TP]A{I|L}[DV]{I|L}AV;[TP]AA{I|L}[DV]{I|L}V;[TP]A{I|L}G{[QN]|[E{I|L}]|[KN]}VV 6.2229;5.9002;5.8654;5.7923;5.3651;5.3637;5.3289;5.3019;5.2557;4.8052 -;-;-;-;+;-;-;-;-;- + 806 1 1.59 57888.5 1.0 3816 5754 9571 SUDHL4_400M_050219_2,9572 SUDHL4_400M_050219_2,9572,LLDVPTAAV True True LLDVPTAAV 54.380172 898.525805652142 20740257.75 9571.0 ENSG00000216490|ENST00000407280|IFI30 6.819414456685384 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9573 54.394 800.0 36514.0 25 0 1518.4 -1 0 64 1153.436328113079 0 1153.436328113079 PEAK CID FTMS 0 0 0 -1 0 2 6 G 1 -1 3.0989 0.0 0.0 0.13445 0.0 0.0 1499.5934681384645 745.2006319635374 2244.7941001020017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 G 0.13445 - 1 + 1 1.59 24355.1 0.5400000214576721 3817 5754 9571 SUDHL4_400M_050219_2,9573 SUDHL4_400M_050219_2,9573, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9576 54.414 759.0 135850.0 25 0 14841.0 + 34285 SLQSTILGV 9 108 459.2688353339868 916.5231177347736 2 459.2686035037041 MULTI CID FTMS 0 0 0 9575 87262.0234375 0.5196958430154137 -6 0.0875434875488281 1 Unmodified _SLQSTILGV_ ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2 34.10243960390752 0.1078313939113124 6 {[TV]|[{I|L}S]}[NP]S{I|L}{M(Oxidation (M))|F} 7 6 32.215 0.0 0.0 3.5149 0.0 0.0 0.0 155.13313905729242 155.13313905729242 11.324091325304837 0.0 0.0 0.0 0 0.0 1.5228787452803376 1.25 0.2302046884880938 {[TV]|[{I|L}S]}[NP]S{I|L}{M(Oxidation (M))|F} 3.5149 - 809 1 1.59 85267.9 1.0 3818 5756 9575 SUDHL4_400M_050219_2,9576 SUDHL4_400M_050219_2,9576,SLQSTILGV True True SLQSTILGV 54.413738 459.268603503704 10508778.9375 9575.0 ENSG00000102910|ENST00000285737|LONP2;;nc|ENSG00000102910|Q86WA8-2|LONP2 2.619545857111613 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9577 54.421 377.0 74695.0 25 0 2022.6 -1 0 72 1161.528735339642 0 1161.528735339642 PEAK CID FTMS 0 0 0 -1 0 2 6 {I|L} 1 -1 3.9794 0.0 0.0 0.17145 0.0 0.0 1524.6296009509654 680.3136690729124 2204.9432700238776 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.17145 - 7 + 1 1.59 29496.2 1.0 3819 5756 9575 SUDHL4_400M_050219_2,9577 SUDHL4_400M_050219_2,9577, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9580 54.433 325.0 392850.0 25 0 37326.0 + 14731 ILADIVISA 9 120 914.5551290119284 913.5478525453284 1 914.5554687380792 MULTI CID FTMS 0 0 0 9579 216685.609375 0.26854290616462 27 -0.3827171325683594 1 Unmodified _ILADIVISA_ ENSG00000065911|ENST00000394053|MTHFD2;ENST00000320415.6_1_7:82219286-82219658:-|nuORF;nc|ENSG00000065911|P13995-2|MTHFD2 97.07464715276576 0.0121042244793311 6 {I|L}{I|L}ADV{I|L}{I|L}SA 9 2 + 69.836 0.0 0.0 7.6445 7.6445 82.601 0.0 0.0 0.0 4.860760973725888 12.587418566968154 4.860760973725888 0.5237875363565792 0 0.3252574989159953 1.0969100130080565 1.1791746928241125 0.0 {I|L}{I|L}ADV{I|L}{I|L}SA;{I|L}{I|L}ADV{I|L}S{I|L}A;{I|L}{I|L}AD{I|L}V{I|L}SA;{I|L}{I|L}AD{I|L}VS{I|L}A;{I|L}{I|L}VDA{I|L}{I|L}SA;{I|L}{I|L}VDA{I|L}S{I|L}A;{NN|[MP]|[D{I|L}]|[EV]}A{I|L}V{I|L}{I|L}SA;{NN|[MP]|[D{I|L}]|[EV]}A{I|L}V{I|L}S{I|L}A;{NN|[MP]|[D{I|L}]|[EV]}A{I|L}{I|L}V{I|L}SA;{NN|[MP]|[D{I|L}]|[EV]}A{I|L}{I|L}VS{I|L}A 7.6445;7.5871;7.5004;7.4431;7.1997;7.1424;7.1124;7.0551;6.9684;6.911 -;-;+;-;-;-;-;-;-;- + 3743 1 1.59 88842.2 1.0 3820 5758 9579 SUDHL4_400M_050219_2,9580 SUDHL4_400M_050219_2,9580,ILADIVISA True True ILADIVISA 54.432886 914.555468738079 7449293.0 9579.0 nc|ENSG00000065911|P13995-2|MTHFD2;;ENSG00000065911|ENST00000394053|MTHFD2;;ENST00000320415.6_1_7:82219286-82219658:-|nuORF 2.540247321128845 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9581 54.447 800.0 189160.0 25 0 26826.0 + 31188 RLPPPFPGL 9 126 497.297923042205 992.58129315121 2 497.2982055544853 MULTI CID FTMS 0 0 0 9579 91927.015625 0.6167030277136063 -10 0.1739387512207031 2 Unmodified _RLPPPFPGL_ ENSG00000028528|ENST00000559844|SNX1;nc|ENSG00000028528|Q13596-2|SNX1;nc|ENSG00000028528|Q13596-3|SNX1 67.34385681178166 0.0221257235307089 6 [R{I|L}]PPP{M(Oxidation (M))|F}PG{I|L} 9 0 + 65.797 0.0 0.0 6.6289 6.6289 92.809 0.0 0.0 0.0 22.20931139056113 39.36812845116052 22.20931139056113 16.261649677965764 0 1.7346368802282015 1.0457574905606752 0.0 0.6109243748081782 + + [R{I|L}]PPP{M(Oxidation (M))|F}PG{I|L};[R{I|L}]YK{M(Oxidation (M))|F}PG{I|L};[R{I|L}]PP[QA][QA]{I|L};[PG][KQ][R{I|L}]P[TP];{[QV]|[N{I|L}]|[RA]|[KV]}[NP][K{I|L}]P[TP] 6.6289;4.9906;2.9749;2.1261;0.59186 +;-;-;-;- + 339 1 1.59 116067.6 0.3799999952316284 3821 5758 9579 SUDHL4_400M_050219_2,9581 SUDHL4_400M_050219_2,9581,RLPPPFPGL True True RLPPPFPGL 54.446701 497.298205554485 7156725.5 9579.0 nc|ENSG00000028528|Q13596-2|SNX1;;nc|ENSG00000028528|Q13596-3|SNX1;;ENSG00000028528|ENST00000559844|SNX1 6.727604389190674 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9582 54.452 314.0 433350.0 25 0 32949.0 + 43617 YAIEVDPVL 9 95 1018.544845843578 1017.537569376978 1 1018.545886218548 MULTI CID FTMS 0 0 0 9579 321336.28125 0.7738286322947724 3 -0.0482864379882812 3 Unmodified _YAIEVDPVL_ ENSG00000122643|ENST00000610140|NT5C3A;ENST00000441170.1_1_4:118496697-118497264:-|nuORF;nc|ENSG00000122643|Q9H0P0-1|NT5C3A;nc|ENSG00000122643|Q9H0P0-2|NT5C3A;nc|ENSG00000122643|Q9H0P0-3|NT5C3A;nc|ENSG00000122643|Q9H0P0|NT5C3A 125.62461146993168 0.0025947660936329 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EVDPV{I|L} 9 0 + 102.68 0.0 0.0 10.091 10.091 92.122 0.0 0.0 0.0 16.80523450795789 16.478174818886373 16.478174818886373 7.385606273598313 0 2.368415180652539 1.0969100130080565 1.341129063296272 0.0 + + {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EVDPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}D{I|L}DPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}VDPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}EDVPV{I|L};{[QN]|[E{I|L}]|[KN]}AYVDPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}DD{I|L}PV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}EV{I|L}DPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}D{I|L}{I|L}DPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}{I|L}DEVPV{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}E{I|L}DVPV{I|L} 10.091;9.3651;9.0748;8.9784;8.4394;8.3754;8.349;8.2633;8.2525;7.9622 +;-;-;-;-;-;-;-;-;- + 3499 1 1.59 92707.1 1.0 3822 5758 9579 SUDHL4_400M_050219_2,9582 SUDHL4_400M_050219_2,9582,YAIEVDPVL True True YAIEVDPVL 54.452473 1018.54588621855 2191008.5 9579.0 ENST00000441170.1_1_4:118496697-118497264:-|nuORF;;nc|ENSG00000122643|Q9H0P0|NT5C3A;;nc|ENSG00000122643|Q9H0P0-1|NT5C3A;;nc|ENSG00000122643|Q9H0P0-2|NT5C3A;;ENSG00000122643|ENST00000610140|NT5C3A;;nc|ENSG00000122643|Q9H0P0-3|NT5C3A 6.97658109664917 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9585 54.473 800.0 203220.0 25 0 43257.0 + 37390 TLADVLYHV 9 136 515.7819054847057 1029.5492580362113 2 515.7815429568291 MULTI CID FTMS 0 0 0 9584 85446.84375 0.4896511178547675 -8 0.10296630859375 1 Unmodified _TLADVLYHV_ ENSG00000129691|ENST00000343823|ASH2L;ENST00000520079.1_1_8:37996261-37996586:+|nuORF;nc|ENSG00000129691|Q9UBL3-2|ASH2L;nc|ENSG00000129691|Q9UBL3-3|ASH2L 50.855029805455786 0.0384952370514206 6 [{I|L}T]ADV{I|L}YHV 9 0 + 72.854 0.0 0.0 7.0763 7.0763 85.202 0.0 0.0 0.0 37.39758155300002 7.205938151799742 7.205938151799742 3.0546218740408904 0 1.0114393726401687 2.0 0.3807196863200844 0.0 + + [{I|L}T]ADV{I|L}YHV;[{I|L}T]EGV{I|L}YHV;[{I|L}T]ADV{I|L}V{[WN]|[YH]};[{I|L}T]EGV{I|L}V{[WN]|[YH]};[{I|L}T]ADV{I|L}[KA]{[CP]|[EA]};[{I|L}T]EGV{I|L}[KA]{[CP]|[EA]};[{I|L}T]ADVRR{[CP]|[EA]};[{I|L}T]VGE{I|L}YHV;[{I|L}T]EGVRR{[CP]|[EA]};[{I|L}T]WVRR{[CP]|[EA]} 7.0763;6.7796;6.1935;5.8968;5.8201;5.7773;5.1856;5.1695;5.1429;4.5521 +;-;-;-;-;-;-;-;-;- + 1238 + 1 1.59 126247.0 0.9800000190734864 3823 5760 9584 SUDHL4_400M_050219_2,9585 SUDHL4_400M_050219_2,9585,TLADVLYHV True True TLADVLYHV 54.472673 515.781542956829 801194.1875 9584.0 ENSG00000129691|ENST00000343823|ASH2L;;ENST00000520079.1_1_8:37996261-37996586:+|nuORF;;nc|ENSG00000129691|Q9UBL3-3|ASH2L;;nc|ENSG00000129691|Q9UBL3-2|ASH2L 7.624880949656169 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9588 54.493 800.0 115710.0 25 0 16848.0 -1 0 122 974.4689381609212 0 974.4670898318292 PEAK CID FTMS 0 0 0 9587 120567.3203125 0.9570093512421866 1 -0.0390090942382812 1 6 {I|L}DA[HV]{M(Oxidation (M))|F}A{M(Oxidation (M))|F}T{M(Oxidation (M))|F}AS 12 -1 47.186 0.0 0.0 2.4236 0.0 0.0 456.1483732927423 181.06206690006096 637.2104401928033 0.0 0.0 0.0 0.0 0 0.6747425010840047 0.0 2.3199601741485107 0.0 {I|L}DA[HV]{M(Oxidation (M))|F}A{M(Oxidation (M))|F}T{M(Oxidation (M))|F}AS 2.4236 - 3110 + 1 1.59 67346.0 0.550000011920929 3824 5762 9587 SUDHL4_400M_050219_2,9588 SUDHL4_400M_050219_2,9588, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9589 54.507 800.0 75600.0 25 0 14864.0 -1 0 96 1109.5004409723206 0 1109.500537097454 PEAK CID FTMS 0 0 0 9587 141008.703125 1.0 0 0.0 2 6 {I|L}VQY{M(Oxidation (M))|F}ANQQA[YG]M 13 -1 60.937 0.0 0.0 2.7486 0.0 0.0 474.1923002940033 226.0838869684204 700.2761872624236 0.0 0.0 0.0 0.0 0 0.7742275032520141 0.0 0.0 0.0 {I|L}VQY{M(Oxidation (M))|F}ANQQA[YG]M 2.7486 - 1785 + 1 1.59 46544.7 0.6100000143051147 3825 5762 9587 SUDHL4_400M_050219_2,9589 SUDHL4_400M_050219_2,9589, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9590 54.516 493.0 47342.0 25 0 1353.8 -1 0 62 1132.0772574001587 0 1132.418749988079 PEAK CID FTMS 0 0 0 -1 0 3 6 N 1 -1 5.4846 0.0 0.0 0.24245 0.0 0.0 1135.4929414587175 1009.55329309635 2145.046234555068 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.24245 - 4 + 1 1.59 20184.2 1.0 3826 5762 9587 SUDHL4_400M_050219_2,9590 SUDHL4_400M_050219_2,9590, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9592 54.529 513.0 206290.0 25 0 15626.0 + 1647 ALMPVLNQV 9 127 492.7810847905663 983.5476166479326 2 492.7814819216728 MULTI CID FTMS 0 0 0 9591 114234.0 0.4254195380106709 5 -0.0810432434082031 1 Unmodified _ALMPVLNQV_ ENSG00000223496|ENST00000435634|EXOSC6 78.44472497914707 0.017893573946697 6 [VP]{I|L}NEV[WK] 8 6 + 38.802 0.0 0.0 3.9451 3.9451 82.811 0.0 0.0 0.0 8.665250650959429 1.7013004991987728 1.7013004991987728 9.97518916800754 0 0.0 1.3979400086720375 0.2396518287104437 0.3252574989159953 [VP]{I|L}NEV[WK];{NN|[MP]|[D{I|L}]|[EV]}N{I|L}PV[WK];[VP]N{I|L}EV[WK];[VP]{I|L}GGEV[WK];{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}PV[WK];{[VA]|[{I|L}G]}GD{I|L}PV[WK];[VP]{I|L}A[DG]V[WK];{NN|[MP]|[D{I|L}]|[EV]}GG{I|L}PV[WK];[{I|L}V]PNEV[WK];[VP]GG{I|L}EV[WK] 3.9451;2.9309;2.9284;2.6727;2.4232;2.0611;2.0606;1.9892;1.6861;1.656 -;-;-;-;-;-;-;-;-;- 798 1 1.59 84002.7 1.0 3827 5763 9591 SUDHL4_400M_050219_2,9592 SUDHL4_400M_050219_2,9592,ALMPVLNQV True True ALMPVLNQV 54.528633 492.781481921673 3187535.25 9591.0 ENSG00000223496|ENST00000435634|EXOSC6 7.183512369791667 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9595 54.546 603.0 214440.0 25 0 21428.0 + -1 SLIDADPYL 9 129 1006.712956999284 0 1006.779284656048 PEAK CID FTMS 0 0 0 -1 0 1 ENSG00000145386|ENST00000274026|CCNA2 6 Q{I|L}VWVV 6 -1 28.136 0.0 0.0 1.3988 0.0 0.0 1026.8961155593115 257.0937835661555 1283.9898991254672 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q{I|L}VWVV 1.3988 - 1298 + 1 1.59 81625.0 1.0 3828 5765 9594 SUDHL4_400M_050219_2,9595 SUDHL4_400M_050219_2,9595, False False SLIDADPYL 54.54579 1006.77928465605 3485381.0 9594.0 ENSG00000145386|ENST00000274026|CCNA2 1.0404571493466694 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9596 54.547 64.0 2248600.0 25 0 136210.0 + 34472 SMFGAGLTV 9 133 882.4386659199636 881.4313894533635 1 882.4401122927666 MULTI CID FTMS 0 0 0 9594 618524.5625 0.4987411519293904 2 -0.0185813903808593 2 Unmodified _SMFGAGLTV_ ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B 107.99703571036002 0.0067560930197464 6 {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}GAG{I|L}TV 9 0 + 74.016 0.0 0.0 8.3973 8.3973 87.377 0.0 0.0 0.0 23.41612688240572 14.973024840566469 14.973024840566469 3.027194418743804 0 1.1549471895720984 1.3979400086720375 2.788725489996436 0.0 + + {[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}GAG{I|L}TV;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}QG{I|L}TV;{[MS]|[{M(Oxidation (M))|F}A]}{M(Oxidation (M))|F}GQ{I|L}TV;{[CT]|[{M(Oxidation (M))|F}G]}A{M(Oxidation (M))|F}AG{I|L}TV;{[YD]|[{M(Oxidation (M))|F}M]}SGAG{I|L}TV;{[YD]|[{M(Oxidation (M))|F}M]}SQG{I|L}TV;{[CT]|[{M(Oxidation (M))|F}G]}A{M(Oxidation (M))|F}Q{I|L}TV;{[YD]|[{M(Oxidation (M))|F}M]}SGQ{I|L}TV;{[VA]|[{I|L}G]}Q{M(Oxidation (M))|F}MSTV;{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}G{[MS]|[{M(Oxidation (M))|F}A]}{I|L}TV 8.3973;8.0539;7.6364;5.7407;5.7318;5.3883;4.9798;4.9708;4.0571;3.5855 +;-;-;-;-;-;-;-;-;- + 2525 1 1.59 96406.4 1.0 3829 5765 9594 SUDHL4_400M_050219_2,9596 SUDHL4_400M_050219_2,9596,SMFGAGLTV True True SMFGAGLTV 54.547364 882.440112292767 5353672.5 9594.0 ENSG00000117410|ENST00000472174|ATP6V0B;;nc|ENSG00000117410|Q99437-2|ATP6V0B 7.60031270980835 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9599 54.558 245.0 497140.0 25 0 38469.0 + 9696 FLSDGTIISV 10 125 1051.5670190085386 1050.5597425419387 1 1051.566699206829 MULTI CID FTMS 0 0 0 9598 304451.75 0.8316658113082818 -1 0.0038948059082031 1 Unmodified _FLSDGTIISV_ ENSG00000141076|ENST00000314423|UTP4;nc|ENSG00000141076|Q969X6-2|UTP4;nc|ENSG00000141076|Q969X6-3|UTP4 62.57269311338072 0.0298375429882549 6 DS{M(Oxidation (M))|F}{I|L}{I|L}SV 7 5 60.016 0.0 0.0 5.7128 0.0 0.0 271.15364272285314 0.0 271.15364272285314 0.0 6.691613753526653 0.0 0.0 0 0.3252574989159953 0.0 2.8494850021680094 0.0 DS{M(Oxidation (M))|F}{I|L}{I|L}SV 5.7128 - 2812 1 1.59 81023.5 1.0 3830 5767 9598 SUDHL4_400M_050219_2,9599 SUDHL4_400M_050219_2,9599,FLSDGTIISV True True FLSDGTIISV 54.558421 1051.56669920683 1568140.375 9598.0 nc|ENSG00000141076|Q969X6-3|UTP4;;ENSG00000141076|ENST00000314423|UTP4;;nc|ENSG00000141076|Q969X6-2|UTP4 6.66000493367513 1.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9600 54.572 800.0 57703.0 25 0 1502.0 -1 0 97 1151.685351550579 0 1151.685351550579 PEAK CID FTMS 0 0 0 -1 0 2 6 M 1 -1 2.4743 0.0 0.0 0.10751 0.0 0.0 896.4104237048708 1270.8819063776002 2167.292330082471 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.10751 - 6 + 1 1.59 34831.7 0.4099999964237213 3831 5767 9598 SUDHL4_400M_050219_2,9600 SUDHL4_400M_050219_2,9600, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9601 54.583 629.0 45601.0 25 0 1438.9 -1 0 76 1151.180346667767 0 1151.180346667767 PEAK CID FTMS 0 0 0 -1 0 3 6 H 1 -1 4.6041 0.0 0.0 0.20015 0.0 0.0 1149.8019031970591 1010.4759005182248 2160.277803715284 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.20015 - 6 + 1 1.59 25066.7 1.0 3832 5767 9598 SUDHL4_400M_050219_2,9601 SUDHL4_400M_050219_2,9601, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9602 54.597 800.0 77431.0 25 0 1049.6 -1 0 83 852.5309379406291 0 852.8561889529228 PEAK CID FTMS 0 0 0 9598 14947.330078125 0.5362114960922871 1 -0.0455207824707031 4 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.59 44874.3 0.3100000023841858 3833 5767 9598 SUDHL4_400M_050219_2,9602 SUDHL4_400M_050219_2,9602, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9604 54.608 431.0 258910.0 25 0 15094.0 28519 PTLQEVILANL 11 131 605.854850984901 1209.6951490366018 2 605.8558227419853 MULTI CID FTMS 0 0 0 9603 226380.15625 0.8583958719256081 -4 0.0681343078613281 1 Unmodified _PTLQEVILANL_ ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13 37.07464296494664 0.257459615863268 6 [TP]AAVQRVA 9 8 56.24 0.0 0.0 4.6491 0.0 0.0 0.0 313.14983047576874 313.14983047576874 13.17113362761608 0.0 0.0 0.0 0 0.3252574989159953 1.154901959985743 2.30153844027246 0.0 [TP]AAVQRVA 4.6491 - 5442 1 1.612 84737.2 1.0 3834 5768 9603 SUDHL4_400M_050219_2,9604 SUDHL4_400M_050219_2,9604,PTLQEVILANL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9605 54.622 800.0 120950.0 25 0 10043.0 + -1 RLLEVPVML 9 107 543.3230159534625 0 543.3232299685478 PEAK CID FTMS 0 0 0 9603 114720.0625 0.9439989508385576 -12 0.1987113952636718 2 Oxidation (M) _RLLEVPVM(Oxidation (M))L_ ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2 24.99096001346401 0.1558265925128033 6 {I|L}TVPVT[VP]E 9 -1 41.362 0.0 0.0 3.8134 0.0 0.0 63.99790006478481 82.06687341861561 146.06477348340042 0.0 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.75 0.0 {I|L}TVPVT[VP]E 3.8134 - 147 + 1 1.612 79930.9 0.4000000059604645 3835 5768 9603 SUDHL4_400M_050219_2,9605 SUDHL4_400M_050219_2,9605,RLLEVPVML False False RLLEVPVML 54.622149 543.323229968548 619331.125 9603.0 ENST00000591718.1_1_19:55966993-55972941:-|nuORF;;ENSG00000063241|ENST00000425675|ISOC2;;nc|ENSG00000063241|Q96AB3-2|ISOC2 5.840481440226237 2.0 True 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9606 54.635 755.0 274500.0 25 0 8980.1 + 45336 YSLSSTLTL 9 122 984.521843082447 983.514566615847 1 984.5229369997978 MULTI CID FTMS 0 0 0 9603 370043.8125 0.5867710295096017 7 -0.1087837219238281 3 Unmodified _YSLSSTLTL_ nc|ENSG00000211592|P01834|IGKC 92.8221339359638 0.0138398038803217 6 {[QN]|[E{I|L}]|[KN]}QTM{I|L}H{I|L} 8 6 + 59.233 0.0 0.0 6.0226 6.0226 79.439 0.0 0.0 0.0 2.826286717101084 9.163865622122673 2.826286717101084 1.2106021906302686 0 0.0 1.5228787452803376 1.6861818737241736 0.2614393726401688 {[QN]|[E{I|L}]|[KN]}QTM{I|L}H{I|L};{[QN]|[E{I|L}]|[KN]}QMT{I|L}H{I|L};[VP]SSTM{I|L}H{I|L};[VP]SSMT{I|L}H{I|L};{[QN]|[E{I|L}]|[KN]}QMH{I|L}T{I|L};[VP]SSMH{I|L}T{I|L};{[QN]|[E{I|L}]|[KN]}WSS{I|L}H{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}TM{I|L}H{I|L};{[QN]|[E{I|L}]|[KN]}[AG]TM{I|L}H{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}MT{I|L}H{I|L} 6.0226;5.8995;5.7352;5.6122;5.2757;5.2542;5.1518;5.1435;5.0809;5.0204 -;-;-;-;-;-;-;-;-;- 5976 1 1.612 134657.9 1.0 3836 5768 9603 SUDHL4_400M_050219_2,9606 SUDHL4_400M_050219_2,9606,YSLSSTLTL True True YSLSSTLTL 54.635272 984.522936999798 3371658.0 9603.0 nc|ENSG00000211592|P01834|IGKC 2.89930792649587 1.0 True 9.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 9611 54.665 800.0 71413.0 25 0 2113.3 -1 0 71 792.5728027224541 0 792.5728027224541 PEAK CID FTMS 0 0 0 -1 0 1 6 Y 1 -1 6.9897 0.0 0.0 0.44151 0.0 0.0 86.5864446679678 1330.4472139947875 1417.0336586627554 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.44151 - 9 + 1 1.612 41154.2 0.4099999964237213 3837 5772 9610 SUDHL4_400M_050219_2,9611 SUDHL4_400M_050219_2,9611, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9612 54.679 800.0 142180.0 25 0 14805.0 + 30689 RFPPTPPLF 9 98 536.3031680648135 1070.5917831964268 2 536.3029662966728 MULTI CID FTMS 0 0 0 9610 97355.0 0.662324882881433 -7 0.1143760681152343 2 Unmodified _RFPPTPPLF_ chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A;ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A 56.17704186161178 0.0281986971544335 6 {[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PP{I|L}{M(Oxidation (M))|F} 9 5 + 47.216 0.0 0.0 4.4103 4.4103 84.124 0.0 0.0 0.0 29.864608319589063 3.1376005576219868 3.1376005576219868 9.732068234120632 0 1.805462187404089 0.8860566476931632 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PP{I|L}{M(Oxidation (M))|F};[{I|L}P]P[{M(Oxidation (M))|F}V]AAP{I|L}{M(Oxidation (M))|F};[W{I|L}][W{I|L}]PP{I|L}{M(Oxidation (M))|F};[{I|L}P]PNN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PP{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}P{M(Oxidation (M))|F}P{I|L};{[QN]|[E{I|L}]|[KN]}[RH]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F};{[HG]|PP}{I|L}[{M(Oxidation (M))|F}V]AAP{I|L}{M(Oxidation (M))|F};[R{M(Oxidation (M))|F}][{I|L}T]{[{M(Oxidation (M))|F}Q]|[{M(Oxidation (M))|F}K]}{I|L}{M(Oxidation (M))|F};{[HG]|PP}{I|L}NN{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{M(Oxidation (M))|F} 4.4103;3.5012;3.4404;3.292;3.2867;2.7719;2.2235;1.8238;1.6567;1.6146 -;-;-;-;-;-;-;-;-;- 558 + 1 1.612 96499.6 0.3499999940395355 3838 5772 9610 SUDHL4_400M_050219_2,9612 SUDHL4_400M_050219_2,9612,RFPPTPPLF True True RFPPTPPLF 54.678587 536.302966296673 7337875.5 9610.0 nc|ENSG00000119866|Q9H165-6|BCL11A;;nc|ENSG00000119866|Q9H165-2|BCL11A;;ENSG00000119866|ENST00000642384|BCL11A;;chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A 6.269078890482585 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9613 54.685 360.0 37496.0 25 0 1548.2 -1 0 38 1164.5337202514631 3490.5793313545896 3 1165.193652331829 MULTI CID FTMS 0 0 0 9610 90117.5078125 1.0 0 0.0 3 6 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.15712 0.0 0.0 2251.067320711815 1089.4296358697875 3340.4969565816027 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.15712 - 4 + 1 1.612 21012.7 1.0 3839 5772 9610 SUDHL4_400M_050219_2,9613 SUDHL4_400M_050219_2,9613, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9616 54.706 800.0 142450.0 25 0 24314.0 + 31189 RLPPPFPGL 9 98 497.297923042205 992.58129315121 2 497.2974120974541 MULTI CID FTMS 0 0 0 9615 42374.87890625 0.2842767813445135 6 -0.0637855529785156 1 Unmodified _RLPPPFPGL_ ENSG00000028528|ENST00000559844|SNX1;nc|ENSG00000028528|Q13596-2|SNX1;nc|ENSG00000028528|Q13596-3|SNX1 60.38955033654506 0.025866396858536 6 [R{I|L}]P{[HG]|PP}{M(Oxidation (M))|F}PG{I|L} 9 0 + 53.12 0.0 0.0 5.3517 5.3517 82.661 0.0 0.0 0.0 20.514611430754144 32.66257482205354 20.514611430754144 6.020599913279625 0 1.5994850021680094 1.3010299956639813 0.0 0.2742275032520141 + + [R{I|L}]P{[HG]|PP}{M(Oxidation (M))|F}PG{I|L};[R{I|L}]PM[{I|L}P]PG{I|L};[R{I|L}][YK]{M(Oxidation (M))|F}PG{I|L} 5.3517;4.7452;4.1953 +;-;- + 140 1 1.612 89882.5 0.3700000047683716 3840 5774 9615 SUDHL4_400M_050219_2,9616 SUDHL4_400M_050219_2,9616,RLPPPFPGL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9619 54.718 319.0 30810.0 25 0 1384.9 -1 0 33 1027.532894146673 0 1027.865161120892 PEAK CID FTMS 0 0 0 9618 10909.5322265625 0.1276756971569526 2 -0.012451171875 1 6 V 1 -1 6.9897 0.0 0.0 0.34045 0.0 0.0 1290.6687413189336 660.2864473932249 1950.9551887121584 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.34045 - 5 + 1 1.612 17285.2 1.0 3841 5776 9618 SUDHL4_400M_050219_2,9619 SUDHL4_400M_050219_2,9619, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9622 54.738 800.0 33174.0 25 0 2231.8 + 38435 TRRRRRHWWDW 11 73 855.9515258669853 0 855.9515258669853 PEAK CID FTMS 0 0 0 -1 0 1 Unmodified _TRRRRRHWWDW_ REV__ENST00000583780.1_2_17:18263786-18266854:-|nuORF 0.0 0.4761840153648598 6 D 1 -1 4.6041 0.0 0.0 0.26926 0.0 0.0 1076.7733997790892 515.0728243463499 1591.8462241254392 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.26926 + + 5 + 1 1.612 25029.9 0.3600000143051147 3842 5778 9621 SUDHL4_400M_050219_2,9622 SUDHL4_400M_050219_2,9622,TRRRRRHWWDW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9623 54.749 594.0 20539.0 25 0 1157.7 -1 0 34 1162.6204755850017 0 1162.454638659954 PEAK CID FTMS 0 0 0 -1 0 2 6 Q 1 -1 2.4743 0.0 0.0 0.1065 0.0 0.0 1349.0798050744972 843.0769747369749 2192.156779811472 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.1065 - 1 + 1 1.612 17879.2 1.0 3843 5778 9621 SUDHL4_400M_050219_2,9623 SUDHL4_400M_050219_2,9623, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9626 54.769 800.0 89665.0 25 0 8930.1 -1 MAALLLRH 8 89 470.7717786844832 0 470.7715942263603 PEAK CID FTMS 0 0 0 9625 92133.1171875 0.953610746647333 1 -0.016357421875 1 Oxidation (M) _M(Oxidation (M))AALLLRH_ ENSG00000143252|ENST00000367975|SDHC;nc|ENSG00000143252|Q99643-2|SDHC;nc|ENSG00000143252|Q99643-3|SDHC;nc|ENSG00000143252|Q99643-4|SDHC 49.66892048692302 0.1079322786441351 6 {I|L}{I|L}{I|L}H 4 -1 30.622 0.0 0.0 3.2593 0.0 0.0 289.10438185489835 171.0890291803344 460.1934110352328 0.0 0.0 0.0 0.0 0 1.16944517631652 0.0 0.0 0.0 {I|L}{I|L}{I|L}H 3.2593 - 70 + 1 1.612 60820.6 0.3799999952316284 3844 5780 9625 SUDHL4_400M_050219_2,9626 SUDHL4_400M_050219_2,9626,MAALLLRH False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9629 54.784 432.0 116620.0 25 0 22655.0 + 37401 TLAKYLMEL 9 83 549.2994026167474 1096.5842523002948 2 549.2993041872978 MULTI CID FTMS 0 0 0 9628 63824.13671875 0.5550662506512414 -2 0.0204200744628906 1 Oxidation (M) _TLAKYLM(Oxidation (M))EL_ ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2;nc|ENSG00000134057|P14635-2|CCNB1 43.85829265575387 0.0542763391141878 6 [{I|L}T]E 3 6 34.195 0.0 0.0 3.1183 0.0 0.0 0.0 750.3858629782823 750.3858629782823 8.427572124898024 0.0 0.0 0.0 0 0.5 2.0 0.3252574989159953 0.0 [{I|L}T]E 3.1183 - 174 1 1.612 41914.8 1.0 3845 5782 9628 SUDHL4_400M_050219_2,9629 SUDHL4_400M_050219_2,9629,TLAKYLMEL True False TLAKYLMEL 54.78363 549.299304187298 710244.3125 9628.0 ENSG00000134057|ENST00000256442|CCNB1;;ENSG00000157456|ENST00000288207|CCNB2;;nc|ENSG00000134057|P14635-2|CCNB1 3.1020963191986084 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9630 54.791 402.0 80261.0 25 0 4538.8 -1 0 67 958.4934466558728 0 958.4938842654228 PEAK CID FTMS 0 0 0 9628 79695.640625 0.7710459492665797 -4 0.0513153076171875 2 6 NAD 3 -1 14.693 0.0 0.0 0.76726 0.0 0.0 552.3267397701987 1059.5142305963502 1611.8409703665488 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 NAD 0.76726 - 65 + 1 1.612 29784.1 1.0 3846 5782 9628 SUDHL4_400M_050219_2,9630 SUDHL4_400M_050219_2,9630, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9633 54.807 549.0 113330.0 25 0 21455.0 + 23305 LTAEEKIIL 9 86 515.3132474484066 1028.6119419636132 2 515.3133422732353 MULTI CID FTMS 0 0 0 9632 100318.4609375 0.9610287096254404 1 -0.0121879577636718 1 Unmodified _LTAEEKIIL_ ENSG00000159579|ENST00000394420|RSPRY1;ENST00000563073.1_1_16:57258382-57272884:+|nuORF;ENST00000564530.5_1_16:57254621-57272884:+|nuORF 37.97399986684836 0.0865783450051559 6 [{I|L}T][DV]KVE{I|L}{I|L} 9 5 + 68.835 0.0 0.0 6.692 6.692 86.672 0.0 0.0 0.0 6.478174818886373 16.478174818886373 6.478174818886373 6.020599913279625 0 0.9247425010840048 2.0 0.8494850021680094 0.0 [{I|L}T][DV]KVE{I|L}{I|L};[{I|L}T]{[CP]|[EA]}E{I|L}K{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}S{I|L}KVE{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[VS]KVE{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}VTKVE{I|L}{I|L};[{I|L}T]{[CP]|[EA]}[K{I|L}]E{I|L}{I|L};[{I|L}T][DV]D{I|L}K{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}SVE{I|L}K{I|L}{I|L};{[QN]|[E{I|L}]|[KN]}[TA]E{I|L}K{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}VSE{I|L}K{I|L}{I|L} 6.692;6.1067;6.0622;6.0125;5.7695;5.7471;5.5214;5.4769;5.4272;5.1842 -;-;-;-;-;-;-;-;-;- 464 1 1.612 54329.2 1.0 3847 5784 9632 SUDHL4_400M_050219_2,9633 SUDHL4_400M_050219_2,9633,LTAEEKIIL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9637 54.832 800.0 100380.0 25 0 5331.2 + 17208 KLLEIDIDGV 10 132 557.8211827941767 1113.627812655153 2 557.8215820193291 MULTI CID FTMS 0 0 0 9636 58307.23828125 0.5415484764454496 1 -0.0253524780273437 1 Unmodified _KLLEIDIDGV_ ENSG00000101868|ENST00000379068|POLA1;nc|ENSG00000101868|P09884|POLA1 65.47368725323818 0.0222277162070287 6 [K{I|L}]{I|L}E{I|L}D{I|L}DGV 10 0 + 89.083 0.0 0.0 7.9993 7.9993 87.268 0.0 0.0 0.0 3.4426497459757 13.781971746929983 3.4426497459757 3.4426497459757 0 1.2302046884880935 0.6777807052660807 1.1989700043360187 0.2887254899964357 + + [K{I|L}]{I|L}E{I|L}D{I|L}DGV;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}{I|L}K{I|L}DGV;{NN|[MP]|[D{I|L}]|[EV]}E{I|L}K{I|L}{I|L}DGV;{I|L}{I|L}KE{I|L}D{I|L}DGV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}E{I|L}K{I|L}DGV;{NN|[MP]|[D{I|L}]|[EV]}{I|L}EK{I|L}{I|L}DGV;[K{I|L}]{I|L}ED{I|L}{I|L}DGV;{[QN]|[E{I|L}]|[KN]}{I|L}K{I|L}D{I|L}DGV;{I|L}{I|L}EK{I|L}D{I|L}DGV;{I|L}{I|L}KED{I|L}{I|L}DGV 7.9993;7.6902;7.6191;7.3037;7.1135;7.0424;6.9867;6.6429;6.5038;6.2911 +;-;-;-;-;-;-;-;-;- + 1196 1 1.733 68027.3 0.8700000047683716 3848 5787 9636 SUDHL4_400M_050219_2,9637 SUDHL4_400M_050219_2,9637,KLLEIDIDGV True True KLLEIDIDGV 54.831625 557.821582019329 356606.375 9636.0 nc|ENSG00000101868|P09884|POLA1;;ENSG00000101868|ENST00000379068|POLA1 6.405778566996257 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9638 54.841 507.0 28567.0 25 0 1357.8 -1 0 42 1068.084887683392 0 1068.084887683392 PEAK CID FTMS 0 0 0 -1 0 2 6 {I|L} 1 -1 6.9897 0.0 0.0 0.32752 0.0 0.0 1215.6892322986216 802.3496798150999 2018.0389121137207 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.32752 - 6 + 1 1.733 20163.4 1.0 3849 5787 9636 SUDHL4_400M_050219_2,9638 SUDHL4_400M_050219_2,9638, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9641 54.856 485.0 96332.0 25 0 10707.0 + 20276 LLDRFLATV 9 67 524.3136928563297 1046.6128327794593 2 524.3140136599541 MULTI CID FTMS 0 0 0 9640 130540.40625 0.0803790167639972 -17 0.1976165771484375 1 Unmodified _LLDRFLATV_ ENSG00000118816|ENST00000237654|CCNI;nc|ENSG00000118816|Q14094-2|CCNI 49.55428908609986 0.0413471690215031 6 {I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}ATV 9 0 + 66.176 0.0 0.0 6.3229 6.3229 81.276 0.0 0.0 0.0 7.609309280316907 14.51544993495972 7.609309280316907 1.7609125905568137 0 1.305462187404089 1.6989700043360187 0.4247425010840047 0.0 + + {I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}ATV;{I|L}{I|L}[RD]{M(Oxidation (M))|F}A{I|L}TV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}{I|L}ATV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}A{I|L}TV;{I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}AS{I|L};{I|L}{I|L}[RD]{M(Oxidation (M))|F}A{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}{I|L}AS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}A{I|L}S{I|L};{I|L}{I|L}[RD]{M(Oxidation (M))|F}AS{I|L}{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}AS{I|L}{I|L} 6.3229;6.1546;5.5958;5.4276;4.936;4.7677;4.2089;4.0407;3.6222;2.8951 +;-;-;-;-;-;-;-;-;- + 159 1 1.733 43147.9 1.0 3850 5789 9640 SUDHL4_400M_050219_2,9641 SUDHL4_400M_050219_2,9641,LLDRFLATV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9643 54.866 402.0 38483.0 25 0 2963.5 + 20249 LLDLKPELAAQ 11 46 605.8556360615496 1209.696719189899 2 605.8560668826103 MULTI CID FTMS 0 0 0 9642 101696.5234375 0.5381272485261723 -2 0.01519775390625 1 Unmodified _LLDLKPELAAQ_ REV__ENSG00000108465|ENST00000338399|CDK5RAP3;REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF;REV__nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-3|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 6.2057823575117 0.8458686499021061 6 V 1 -1 6.9897 0.0 0.0 0.57781 0.0 0.0 770.4539346213429 337.15229211978755 1107.6062267411305 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.57781 - 10 + 1 1.733 15692.2 1.0 3851 5790 9642 SUDHL4_400M_050219_2,9643 SUDHL4_400M_050219_2,9643,LLDLKPELAAQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9645 54.882 800.0 268260.0 25 0 21138.0 + 19365 FLQPELVKL 9 133 542.8325173290523 1083.6504817249045 2 543.8320190310478 MULTI CID FTMS 0 0 0 9644 261012.203125 0.9641384840762404 -5 0.054351806640625 1 Unmodified _LEQLLLDKL_ nc|ENSG00000068878|Q14997-2|PSME4;ENSG00000068878|ENST00000404125|PSME4 21.74664581756881 0.2544899275067181 6 [EP]{I|L}VQK{I|L} 7 5 38.789 0.0 0.0 3.5795 0.0 0.0 0.0 273.1405315615037 273.1405315615037 0.8161879961938752 0.0 0.0 0.0 0 0.25 0.6989700043360187 1.089136830878453 0.6382104921644451 [EP]{I|L}VQK{I|L} 3.5795 - 1042 1 1.733 162700.9 0.3400000035762787 3852 5791 9644 SUDHL4_400M_050219_2,9645 SUDHL4_400M_050219_2,9645,LEQLLLDKL False False FLQPELVKL 54.881906 543.832019031048 1351030.5 9644.0 nc|ENSG00000068878|Q14997-2|PSME4;;ENSG00000068878|ENST00000404125|PSME4 5.263291200002034 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9646 54.896 800.0 72577.0 25 0 15619.0 -1 0 56 1086.8603362435754 3257.5591793309263 3 1087.196215808392 MULTI CID FTMS 0 0 0 9644 71871.6875 0.3354497542024493 -27 0.3368911743164062 2 6 C{[QD]|[EN]|[WG]|[KD]|[RS]} 3 -1 8.072 0.0 0.0 0.24779 0.0 0.0 2893.447069236525 0.0 2893.447069236525 0.0 0.1131684585676868 0.0 0.0 0 0.0 0.0 0.0 0.0 C{[QD]|[EN]|[WG]|[KD]|[RS]} 0.24779 - 20 1 1.733 49346.8 0.2399999946355819 3853 5791 9644 SUDHL4_400M_050219_2,9646 SUDHL4_400M_050219_2,9646, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9651 54.924 757.0 103200.0 25 0 22964.0 + 33459 SIFKAWAV 8 94 461.2636145268904 920.5126761205807 2 461.2628356814384 MULTI CID FTMS 0 0 0 9650 83914.9609375 0.445279724787658 -7 0.0673675537109375 1 Unmodified _SIFKAWAV_ ENSG00000140968|ENST00000268638|IRF8 30.22481116460888 0.4082965392918993 6 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 8 2 + 37.166 0.0 0.0 4.0375 4.0375 86.317 0.0 0.0 0.0 18.582268588648247 5.293774815719203 5.293774815719203 37.1657624451305 0 0.4247425010840047 2.0 0.3252574989159953 0.0 {[TV]|[{I|L}S]}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}A{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]} 4.0375 - 130 + 1 1.733 64300.2 1.0 3854 5795 9650 SUDHL4_400M_050219_2,9651 SUDHL4_400M_050219_2,9651,SIFKAWAV False True SIFKAWAV 54.923612 461.262835681438 826055.5625 9650.0 ENSG00000140968|ENST00000268638|IRF8 2.8811049461364746 2.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9654 54.943 756.0 148070.0 25 0 13243.0 + 30690 RFPPTPPLF 9 126 536.3038351396438 1070.5931173460874 2 536.3028442263603 MULTI CID FTMS 0 0 0 9653 122162.125 0.7799778986961388 -23 0.2385063171386718 1 Unmodified _RFPPTPPLF_ chr2:60546300-60550868|48|23.35|0.81|4.84|-|ENST00000643459|BCL11A,BCL11A;ENSG00000119866|ENST00000642384|BCL11A;nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A 46.020951573049366 0.0490941689151868 6 {[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PP{I|L}{M(Oxidation (M))|F} 9 5 + 39.09 0.0 0.0 3.6513 3.6513 77.909 0.0 0.0 0.0 2.688324713653081 6.778259348524365 2.688324713653081 6.778259348524365 0 1.6237125054200234 0.0 0.0 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PP{I|L}{M(Oxidation (M))|F};[{I|L}P]W[W{I|L}]P{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}{I|L}{[QD]|[EN]|[WG]|[KD]|[RS]}PP{M(Oxidation (M))|F}{I|L};[W{I|L}][W{I|L}]PP{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HK]VW{I|L}{M(Oxidation (M))|F};[W{I|L}]P[W{I|L}]P{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}[HK]V{[DA]|[EG]}{I|L}{M(Oxidation (M))|F};[W{I|L}][W{I|L}]Q{I|L}VN;{[QN]|[E{I|L}]|[KN]}[HK]VW{M(Oxidation (M))|F}{I|L};[{I|L}P]P[QT][R{M(Oxidation (M))|F}]VN 3.6513;3.0182;2.5277;2.1055;1.8273;1.3573;0.96214;0.70552;0.70371;0.47189 -;-;-;-;-;-;-;-;-;- 543 + 1 1.733 92315.0 1.0 3855 5797 9653 SUDHL4_400M_050219_2,9654 SUDHL4_400M_050219_2,9654,RFPPTPPLF True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9657 54.964 800.0 120800.0 25 0 16706.0 + 31190 RLPPPFPGL 9 104 497.297504145196 992.580455357192 2 497.2968627810478 MULTI CID FTMS 0 0 0 9656 87139.828125 0.8382596506332699 2 -0.0204238891601562 1 Unmodified _RLPPPFPGL_ ENSG00000028528|ENST00000559844|SNX1;nc|ENSG00000028528|Q13596-2|SNX1;nc|ENSG00000028528|Q13596-3|SNX1 28.486842064014134 0.1687311288560894 6 [R{I|L}]P{[HG]|PP}{M(Oxidation (M))|F} 6 3 29.174 0.0 0.0 2.9392 0.0 0.0 0.0 282.14563903258346 282.14563903258346 5.70615965204567 0.0 0.0 0.0 0 0.8807196863200843 1.0969100130080565 0.0 0.2742275032520141 + [R{I|L}]P{[HG]|PP}{M(Oxidation (M))|F} 2.9392 + + 277 1 1.733 78320.8 0.8799999952316284 3856 5799 9656 SUDHL4_400M_050219_2,9657 SUDHL4_400M_050219_2,9657,RLPPPFPGL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9664 55.0 800.0 97522.0 25 0 9750.4 + 10703 FVYENPISL 9 78 1081.5564247111995 1080.5491482445996 1 1081.554858386517 MULTI CID FTMS 0 0 0 9663 80341.734375 0.7135610531881381 -12 0.0840950012207031 1 Unmodified _FVYENPISL_ ENSG00000005486|ENST00000006777|RHBDD2;nc|ENSG00000005486|Q6NTF9-2|RHBDD2 93.16586880292088 0.0136995152735431 6 [{M(Oxidation (M))|F}V]YENP{I|L}S{I|L} 9 0 + 87.387 0.0 0.0 8.0873 8.0873 96.218 0.0 0.0 0.0 7.147642715192504 68.78698371354965 7.147642715192504 18.32264679816056 0 2.055462187404089 0.0 0.4247425010840047 1.274227503252014 + + [{M(Oxidation (M))|F}V]YENP{I|L}S{I|L};[YE]N{M(Oxidation (M))|F}VP{I|L}S{I|L};[YE]NV{M(Oxidation (M))|F}P{I|L}S{I|L};[{M(Oxidation (M))|F}V]YEGGP{I|L}S{I|L};[YQ]D{M(Oxidation (M))|F}VP{I|L}S{I|L};[YQ]DV{M(Oxidation (M))|F}P{I|L}S{I|L};[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}C(Carbamidomethyl (C))VP{I|L}S{I|L};[{M(Oxidation (M))|F}V]{M(Oxidation (M))|F}[CG]VP{I|L}S{I|L};[{M(Oxidation (M))|F}V]YE[QP]VS{I|L};[{M(Oxidation (M))|F}V]YE[{I|L}P]NS{I|L} 8.0873;6.3916;6.3019;6.0559;5.9974;5.9077;5.5028;4.6506;4.6392;4.3606 +;-;-;-;-;-;-;-;-;- + 1120 1 1.733 57002.9 0.3899999856948852 3857 5805 9663 SUDHL4_400M_050219_2,9664 SUDHL4_400M_050219_2,9664,FVYENPISL True True FVYENPISL 55.000341 1081.55485838652 638539.0 9663.0 ENSG00000005486|ENST00000006777|RHBDD2;;nc|ENSG00000005486|Q6NTF9-2|RHBDD2 9.116112550099691 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9670 55.026 403.0 168710.0 25 0 33707.0 + 37777 TLSDLRVYL 9 79 540.3088006861502 1078.6030484391003 2 540.3083984255791 MULTI CID FTMS 0 0 0 9669 73837.4296875 0.256630217639532 -8 0.0446929931640625 1 Unmodified _TLSDLRVYL_ ENSG00000271303|ENST00000381962|SRXN1;ENST00000488788.2_1_20:629360-656142:-|nuORF 34.40172386719151 0.1061884637610825 6 [{I|L}T]SD{I|L}[RV]Y{I|L} 9 0 + 66.845 0.0 0.0 6.1974 6.1974 91.779 0.0 0.0 0.0 40.55848105229167 14.973024840566469 14.973024840566469 16.989700043360187 0 0.8494850021680094 2.0 0.4247425010840047 0.0 + + [{I|L}T]SD{I|L}[RV]Y{I|L};[{I|L}T]S[RV]{NN|[MP]|[D{I|L}]|[EV]}Y{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VY{I|L}T{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V[{I|L}T]Y{I|L};{[TV]|[{I|L}S]}[RD]VY{I|L}T{I|L} 6.1974;4.6222;3.478;2.7614;0.65579 +;-;-;-;- + 123 + 1 1.733 57443.3 1.0 3858 5810 9669 SUDHL4_400M_050219_2,9670 SUDHL4_400M_050219_2,9670,TLSDLRVYL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9674 55.051 800.0 104550.0 25 0 19763.0 + 37636 TLLNVIKSV 9 91 493.8159516655019 985.617350397804 2 493.8159057497978 MULTI CID FTMS 0 0 0 9673 103954.609375 0.7634882042010875 -1 0.0040664672851562 1 Unmodified _TLLNVIKSV_ ENSG00000123104|ENST00000381340|ITPR2;ENSG00000150995|ENST00000649015|ITPR1;ENST00000493491.5_1_3:4841632-4887906:+|nuORF;ENST00000538984.1_1_12:26564247-26572125:-|nuORF;nc|ENSG00000150995|Q14643-2|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1 65.47368725323818 0.0230515101691092 6 [{I|L}T]{I|L}NV{I|L}KSV 9 0 + 85.143 0.0 0.0 8.6386 8.6386 94.399 0.0 0.0 0.0 70.85582825465337 15.415443853223351 15.415443853223351 9.208187539523763 0 1.4436726795685342 2.0 0.6022338482433752 0.7059771852360797 + + [{I|L}T]{I|L}NV{I|L}KSV;[{I|L}T]{I|L}GGV{I|L}KSV 8.6386;7.7043 +;- + 557 + 1 1.733 67673.6 0.9300000071525574 3859 5813 9673 SUDHL4_400M_050219_2,9674 SUDHL4_400M_050219_2,9674,TLLNVIKSV True True TLLNVIKSV 55.05068 493.815905749798 567461.625 9673.0 nc|ENSG00000150995|Q14643-3|ITPR1;;nc|ENSG00000150995|Q14643-4|ITPR1;;nc|ENSG00000150995|Q14643-2|ITPR1;;nc|ENSG00000150995|Q14643-6|ITPR1;;nc|ENSG00000150995|Q14643-7|ITPR1;;ENST00000538984.1_1_12:26564247-26572125:-|nuORF;;nc|ENSG00000150995|Q14643-5|ITPR1;;nc|ENSG00000150995|Q14643-8|ITPR1;;ENSG00000150995|ENST00000649015|ITPR1;;ENSG00000123104|ENST00000381340|ITPR2;;ENST00000493491.5_1_3:4841632-4887906:+|nuORF 5.577342669169108 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9675 55.065 800.0 73868.0 25 0 3974.3 -1 0 97 1158.535420382686 3472.584431748258 3 1158.873950183392 MULTI CID FTMS 0 0 0 9673 110210.6328125 0.7140226396468051 -1 0.0040664672851562 2 6 YEP[{I|L}T]Y{M(Oxidation (M))|F}ANQQAED 14 -1 43.502 0.0 0.0 1.2527 0.0 0.0 1466.7094137191511 333.1317537897094 1799.8411675088605 0.0 0.0 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 YEP[{I|L}T]Y{M(Oxidation (M))|F}ANQQAED 1.2527 - 2311 + 1 1.733 42418.4 0.4199999868869781 3860 5813 9673 SUDHL4_400M_050219_2,9675 SUDHL4_400M_050219_2,9675, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9676 55.078 800.0 54973.0 25 0 6958.9 + 44219 YLGSAIQLV 9 70 963.5517290341912 962.5444525675912 1 963.5500366091728 MULTI CID FTMS 0 0 0 9673 90325.8125 0.6749601359342168 8 -0.099700927734375 3 Unmodified _YLGSAIQLV_ ENSG00000188976|ENST00000327044|NOC2L;ENST00000477976.5_1_1:880076-889593:-|nuORF 56.17704186161178 0.0281986971544335 6 [Q{I|L}]SY{I|L}Q{I|L}V 8 3 + 75.042 0.0 0.0 7.7962 7.7962 93.586 0.0 0.0 0.0 6.989700043360188 61.61236583892361 6.989700043360188 9.262137858390815 0 0.7302046884880937 0.0 1.610924374808178 0.3494850021680094 [Q{I|L}]SY{I|L}Q{I|L}V;[Q{I|L}]SY{I|L}[AG]{I|L}V;[Q{I|L}]SY{I|L}{I|L}QV;[Q{I|L}]SYQ{I|L}{I|L}V;[Q{I|L}]S{I|L}YQ{I|L}V;[Y{I|L}]{[QS]|[NT]}{I|L}Q{I|L}V;[Q{I|L}]VTYQ{I|L}V;[Q{I|L}]SY{I|L}{I|L}[AG]V;[Q{I|L}]{I|L}SYQ{I|L}V;[Q{I|L}]SY[AG]{I|L}{I|L}V 7.7962;6.834;6.4121;6.3304;6.2292;6.0032;5.7335;5.4499;5.4208;5.3682 -;-;-;-;-;-;-;-;-;- 634 1 1.733 37459.6 0.3899999856948852 3861 5813 9673 SUDHL4_400M_050219_2,9676 SUDHL4_400M_050219_2,9676,YLGSAIQLV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9683 55.103 61.0 854660.0 25 0 79647.0 + 20277 LLDRFLATV 9 65 524.3136928563297 1046.6128327794593 2 524.3136474490166 MULTI CID FTMS 0 0 0 9682 830798.125 0.5115560640203884 13 -0.1631431579589843 1 Unmodified _LLDRFLATV_ ENSG00000118816|ENST00000237654|CCNI;nc|ENSG00000118816|Q14094-2|CCNI 61.60191391372663 0.0251951588191061 6 {I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}ATV 9 0 + 69.186 0.0 0.0 6.6105 6.6105 85.54 0.0 0.0 0.0 8.57840941039747 14.51544993495972 8.57840941039747 4.771212547196626 0 1.305462187404089 1.6989700043360187 0.4247425010840047 0.0 + + {I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}ATV;{I|L}{I|L}[RD]{M(Oxidation (M))|F}A{I|L}TV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}{I|L}ATV;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}A{I|L}TV;{I|L}{I|L}[RD]{M(Oxidation (M))|F}AT{I|L}V;{I|L}{I|L}[RD]{M(Oxidation (M))|F}{I|L}AS{I|L};{I|L}{I|L}[RD]{M(Oxidation (M))|F}A{I|L}S{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}AT{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}{I|L}AS{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]{M(Oxidation (M))|F}A{I|L}S{I|L} 6.6105;6.1546;5.7909;5.335;5.2849;5.2236;4.7677;4.4653;4.404;3.9481 +;-;-;-;-;-;-;-;-;- + 353 1 1.733 46710.8 1.0 3862 5819 9682 SUDHL4_400M_050219_2,9683 SUDHL4_400M_050219_2,9683,LLDRFLATV True True LLDRFLATV 55.103432 524.313647449017 15468562.0 9682.0 ENSG00000118816|ENST00000237654|CCNI;;nc|ENSG00000118816|Q14094-2|CCNI 6.475563685099284 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9684 55.118 800.0 11520.0 25 0 1320.3 -1 0 27 968.2802612185478 0 968.2802612185478 PEAK CID FTMS 0 0 0 -1 0 2 6 Y 1 -1 3.9794 0.0 0.0 0.2057 0.0 0.0 1389.2707752673705 379.1996248834594 1768.4704001508298 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.2057 - 1 + 1 1.733 17437.3 0.3700000047683716 3863 5819 9682 SUDHL4_400M_050219_2,9684 SUDHL4_400M_050219_2,9684, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9686 55.134 800.0 67458.0 25 0 4345.1 + 20250 LLDLKPELAAQ 11 88 605.8556360615496 1209.696719189899 2 605.8556396365166 MULTI CID FTMS 0 0 0 9685 105483.25 0.5581647156599573 28 -0.3353309631347656 1 Unmodified _LLDLKPELAAQ_ REV__ENSG00000108465|ENST00000338399|CDK5RAP3;REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF;REV__nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-3|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 13.042465956692816 0.7638483625850725 6 [TP]AAVQRVA 9 -1 41.358 0.0 0.0 3.4189 0.0 0.0 0.0 313.1520747950586 313.1520747950586 -0.3683905801010212 0.0 -0.3683905801010212 0.0 0 0.3252574989159953 1.0457574905606752 0.8252574989159953 0.3054621874040891 [TP]AAVQRVA 3.4189 - 671 1 1.733 42979.7 0.4199999868869781 3864 5820 9685 SUDHL4_400M_050219_2,9686 SUDHL4_400M_050219_2,9686,LLDLKPELAAQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9688 55.15 770.0 144500.0 25 0 13840.0 + 29506 QLLEKVIEL 9 134 542.8325173290523 1083.6504817249045 2 542.8343994021416 MULTI CID FTMS 0 0 0 9687 102679.3828125 0.2163134463720788 14 -0.13946533203125 1 Unmodified _QLLEKVIEL_ ENSG00000093144|ENST00000454859|ECHDC1;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;nc|ENSG00000093144|Q9NTX5-4|ECHDC1;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1 92.65332237495696 0.0139087009896299 6 {[QN]|[E{I|L}]|[KN]}KV{I|L}Q{I|L}E{I|L} 9 4 + 52.148 0.0 0.0 4.8123 4.8123 76.572 0.0 0.0 0.0 7.213872814233596 6.482238096358927 6.482238096358927 1.962946451439692 0 0.4802046884880938 1.0 1.3684151806525389 0.5 {[QN]|[E{I|L}]|[KN]}KV{I|L}Q{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}Q{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}KV{I|L}E[Q{I|L}]{I|L};{[QN]|[E{I|L}]|[KN]}VK{I|L}E[Q{I|L}]{I|L};{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}V{I|L}{I|L}Q{I|L}E{I|L};[Q{I|L}]{I|L}QKT[Q{I|L}]{I|L};{[QN]|[E{I|L}]|[KN]}KVE{I|L}[Q{I|L}]{I|L};[Q{I|L}]{I|L}PE{I|L}{I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}{I|L}Q{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}KV{I|L}[AG]{I|L}E{I|L} 4.8123;4.6311;4.4699;4.2888;4.1466;4.0671;4.0662;4.0589;4.03;3.9625 -;-;-;-;-;-;-;-;-;- 2794 1 1.733 86218.3 1.0 3865 5821 9687 SUDHL4_400M_050219_2,9688 SUDHL4_400M_050219_2,9688,QLLEKVIEL True True QLLEKVIEL 55.149896 542.834399402142 2099354.0 9687.0 nc|ENSG00000093144|Q9NTX5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;;ENST00000368287.1_1_6:127648134-127664493:-|nuORF;;nc|ENSG00000093144|Q9NTX5-3|ECHDC1;;ENSG00000093144|ENST00000454859|ECHDC1;;nc|ENSG00000093144|Q9NTX5-4|ECHDC1 3.867652972539266 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9689 55.16 582.0 173460.0 25 0 18506.0 + 17369 KMAEMLVEL 9 110 532.2797092240689 1062.5448655149378 2 532.2797729372978 MULTI CID FTMS 0 0 0 9687 105369.7734375 0.4970489204717658 -5 0.0473976135253906 2 Unmodified _KMAEMLVEL_ ENSG00000178988|ENST00000320848|MRFAP1L1;ENSG00000179010|ENST00000382581|MRFAP1 66.45667989310934 0.0225072657982126 6 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L} 9 3 + 86.71 0.0 0.0 8.1606 8.1606 90.394 0.0 0.0 0.0 16.478174818886373 16.478174818886373 16.478174818886373 6.817496819840656 0 1.048455006504028 1.2218487496163564 1.416386562212267 0.0 {NN|[MP]|[D{I|L}]|[EV]}CKM{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}CMK{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}C{I|L}MKVE{I|L};{NN|[MP]|[D{I|L}]|[EV]}CKMV{I|L}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}CM{I|L}KVE{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}AKM{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}{I|L}CMKVE{I|L};{[CP]|[EA]}MKM{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}CMKV{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}MAMKVE{I|L} 8.1606;7.519;7.2315;6.9158;6.6649;6.6098;6.4361;6.4113;6.2741;6.2221 -;-;-;-;-;-;-;-;-;- 1132 1 1.733 82958.6 1.0 3866 5821 9687 SUDHL4_400M_050219_2,9689 SUDHL4_400M_050219_2,9689,KMAEMLVEL True True KMAEMLVEL 55.1601 532.279772937298 1076879.375 9687.0 ENSG00000179010|ENST00000382581|MRFAP1;;ENSG00000178988|ENST00000320848|MRFAP1L1 3.3814987341562905 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9690 55.174 800.0 143350.0 25 0 6148.4 -1 0 129 1086.8603362435754 3257.5591793309263 3 1087.196459949017 MULTI CID FTMS 0 0 0 9687 203490.734375 0.9497608752900042 3 -0.0709953308105468 3 6 MD 2 -1 7.9588 0.0 0.0 0.24432 0.0 0.0 147.1500202160899 2861.337201759398 3008.487221975488 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MD 0.24432 - 73 + 1 1.733 72735.6 0.6200000047683716 3867 5821 9687 SUDHL4_400M_050219_2,9690 SUDHL4_400M_050219_2,9690, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9691 55.188 800.0 120840.0 25 0 17640.0 + 33907 SLFSFAPYTS 10 123 560.2703687747074 1118.5261846162148 2 560.2704955935478 MULTI CID FTMS 0 0 0 9687 87266.828125 1.0 0 0.0 4 Unmodified _SLFSFAPYTS_ REV__ENSG00000118017|ENST00000236709|A4GNT 18.1463463914782 0.5430639438673815 6 {[TV]|[{I|L}S]}{[YC]|[HE]}S{I|L}{M(Oxidation (M))|F}RM 9 -1 + 51.366 0.0 0.0 4.5923 4.5923 77.18 0.0 0.0 0.0 18.918271902055324 3.645162531850872 3.645162531850872 3.0102999566398125 0 0.4247425010840047 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}{[YC]|[HE]}S{I|L}{M(Oxidation (M))|F}RM;{[TV]|[{I|L}S]}{[YC]|[HE]}S{M(Oxidation (M))|F}{I|L}RM;{[TV]|[{I|L}S]}{[YC]|[HE]}S{I|L}{M(Oxidation (M))|F}{[CA]|SS}{I|L};{[TV]|[{I|L}S]}{[YC]|[HE]}S{I|L}M[R{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}{[YC]|[HE]}S{M(Oxidation (M))|F}{I|L}{[CA]|SS}{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PH[MT]{[CA]|SS}{I|L};{[TV]|[{I|L}S]}{[YC]|[HE]}S{M(Oxidation (M))|F}P[R{M(Oxidation (M))|F}];{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PH{[WS]|[C(Carbamidomethyl (C)){I|L}]}{M(Oxidation (M))|F}V;{[TV]|[{I|L}S]}{[YC]|[HE]}S{I|L}[YG]T{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}PH{M(Oxidation (M))|F}[Q{I|L}]M 4.5923;4.3231;4.2664;4.1498;3.9972;3.9539;3.8807;3.7104;3.5158;3.4507 -;-;-;-;-;-;-;-;-;- 672 + 1 1.733 77205.3 0.3499999940395355 3868 5821 9687 SUDHL4_400M_050219_2,9691 SUDHL4_400M_050219_2,9691,SLFSFAPYTS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9693 55.201 528.0 161620.0 25 0 16949.0 + 29511 QLLETLNQL 9 99 536.3038351396438 1070.5931173460874 2 536.3049804568291 MULTI CID FTMS 0 0 0 9692 114964.109375 0.7340201756950901 2 -0.0172157287597656 1 Unmodified _QLLETLNQL_ ENSG00000204843|ENST00000628224|DCTN1;nc|ENSG00000204843|Q14203-2|DCTN1;nc|ENSG00000204843|Q14203-3|DCTN1;nc|ENSG00000204843|Q14203-4|DCTN1;nc|ENSG00000204843|Q14203-5|DCTN1;nc|ENSG00000204843|Q14203-6|DCTN1 58.6788170122104 0.0268135626297836 6 [Q{I|L}]{I|L}EPVN 7 4 43.699 0.0 0.0 4.0818 0.0 0.0 0.0 274.1375869107937 274.1375869107937 16.295557402119123 0.0 0.0 0.0 0 0.0 1.3010299956639813 0.3807196863200844 0.7452209273882318 [Q{I|L}]{I|L}EPVN 4.0818 - 673 1 1.788 71354.1 1.0 3869 5822 9692 SUDHL4_400M_050219_2,9693 SUDHL4_400M_050219_2,9693,QLLETLNQL True True QLLETLNQL 55.200981 536.304980456829 2450195.75 9692.0 nc|ENSG00000204843|Q14203-3|DCTN1;;ENSG00000204843|ENST00000628224|DCTN1;;nc|ENSG00000204843|Q14203-4|DCTN1;;nc|ENSG00000204843|Q14203-2|DCTN1;;nc|ENSG00000204843|Q14203-6|DCTN1;;nc|ENSG00000204843|Q14203-5|DCTN1 0.692528652648131 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9696 55.221 800.0 88523.0 25 0 7400.7 + + 33345 KVFSAFITV 9 123 506.2976508286015 1010.580748724003 2 506.2972595095634 MULTI CID FTMS 0 0 0 9695 53058.75390625 0.5700157512380379 -1 0.0040321350097656 1 Unmodified _SGFLFKLSL_ ENST00000477069.5_1_9:131747266-131765892:+|nuORF;ENSG00000095319|ENST00000372577|NUP188;nc|ENSG00000095319|Q5SRE5-2|NUP188 32.30548876998284 0.1201446275138228 6 {I|L}{M(Oxidation (M))|F}KWTV 6 -1 42.829 0.0 0.0 4.238 0.0 0.0 218.12820354480124 0.0 218.12820354480124 0.0 19.37321289724529 0.0 0.0 0 0.0 0.0 1.372363747448347 0.0 {I|L}{M(Oxidation (M))|F}KWTV 4.238 - 452 + 1 1.788 56357.9 0.8700000047683716 3870 5824 9695 SUDHL4_400M_050219_2,9696 SUDHL4_400M_050219_2,9696,SGFLFKLSL False False KVFSAFITV 55.221375 506.297259509563 509186.65625 9695.0 ENST00000477069.5_1_9:131747266-131765892:+|nuORF;;ENSG00000095319|ENST00000372577|NUP188;;nc|ENSG00000095319|Q5SRE5-2|NUP188 4.021615982055664 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9703 55.258 800.0 81885.0 25 0 10705.0 -1 PKSENECVFV 10 87 604.7864365937394 1207.558320254279 2 604.7867919802666 MULTI CID FTMS 0 0 0 9702 36965.89453125 0.3155150367331348 -5 0.0201339721679687 1 Carbamidomethyl (C) _PKSENEC(Carbamidomethyl (C))VFV_ ENSG00000127329|ENST00000334414|PTPRB;nc|ENSG00000127329|P23467-2|PTPRB;nc|ENSG00000127329|P23467-4|PTPRB;nc|ENSG00000127329|P23467|PTPRB 19.256988751693697 0.5244284437930726 6 [QA]ADQ[EC]VV{M(Oxidation (M))|F}V 11 -1 + 33.66 0.0 0.0 2.7875 2.7875 77.403 0.0 0.0 0.0 7.813829020625697 16.502382695230118 7.813829020625697 8.803623896899865 0 1.048455006504028 0.0 0.0 1.4538271422956002 [QA]ADQ[EC]VV{M(Oxidation (M))|F}V;[DN]GVQ[EC]VV{M(Oxidation (M))|F}V;[QA]AD[AG][EC]VV{M(Oxidation (M))|F}V;[QA]AS{[C(Carbamidomethyl (C))G]|[NC]}[NG]VV{M(Oxidation (M))|F}V;{[CP]|[EA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D[NG]VV{M(Oxidation (M))|F}V;{[CP]|[EA]}{[QG]|[NA]}Q[EC]VV{M(Oxidation (M))|F}V;{[CP]|[EA]}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}D[RN]V{M(Oxidation (M))|F}V;[DN]GV[AG][EC]VV{M(Oxidation (M))|F}V;{[QV]|[N{I|L}]|[RA]|[KV]}[EC]D[NG]VV{M(Oxidation (M))|F}V;{[QV]|[N{I|L}]|[RA]|[KV]}[EC]D[RN]V{M(Oxidation (M))|F}V 2.7875;2.0584;2.0315;1.8234;1.7485;1.7333;1.5991;1.3025;1.2254;1.076 -;-;-;-;-;-;-;-;-;- 249 1 1.788 50567.0 0.3700000047683716 3871 5830 9702 SUDHL4_400M_050219_2,9703 SUDHL4_400M_050219_2,9703,PKSENECVFV False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9709 55.287 565.0 175940.0 25 0 34500.0 + 37778 TLSDLRVYL 9 102 540.3088006861502 1078.6030484391003 2 540.3091918826103 MULTI CID FTMS 0 0 0 9708 117406.8046875 0.4080604371906502 17 -0.2024154663085937 1 Unmodified _TLSDLRVYL_ ENSG00000271303|ENST00000381962|SRXN1;ENST00000488788.2_1_20:629360-656142:-|nuORF 45.69961567697781 0.0497987121815769 6 [{I|L}T]SD{I|L}RVY{I|L} 9 0 + 69.403 0.0 0.0 6.4345 6.4345 92.574 0.0 0.0 0.0 39.66522195442691 14.973024840566469 14.973024840566469 17.501225267834002 0 1.0044321917401078 2.0 0.3494850021680094 0.0 + + [{I|L}T]SD{I|L}RVY{I|L};[{I|L}T]S[RV]EVY{I|L};[{I|L}T]S[KQ]QVY{I|L};[{I|L}T]{I|L}{[ET]|[MV]}QVY{I|L};[{I|L}T]S[KQ][YV]Q{I|L};[{I|L}T]S[RV][YV]E{I|L};[{I|L}T]{I|L}{[ET]|[MV]}[YV]Q{I|L};[{I|L}T]S[KQ][YV]{I|L}Q;[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}VY{I|L}T{I|L};[{I|L}T]{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[{I|L}T]VY{I|L} 6.4345;4.8119;4.5328;4.2088;3.831;3.7836;3.507;3.2879;3.2426;3.0841 +;-;-;-;-;-;-;-;-;- + 577 + 1 1.788 80347.4 1.0 3872 5835 9708 SUDHL4_400M_050219_2,9709 SUDHL4_400M_050219_2,9709,TLSDLRVYL True True TLSDLRVYL 55.287273 540.30919188261 2760829.25 9708.0 ENST00000488788.2_1_20:629360-656142:-|nuORF;;ENSG00000271303|ENST00000381962|SRXN1 5.195151011149089 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9710 55.296 519.0 49965.0 25 0 2052.7 -1 0 66 1089.873583972454 0 1089.873583972454 PEAK CID FTMS 0 0 0 -1 0 2 6 H 1 -1 3.4949 0.0 0.0 0.16048 0.0 0.0 1518.427818724402 519.2371309869749 2037.6649497113767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.16048 - 11 + 1 1.788 26307.3 1.0 3873 5835 9708 SUDHL4_400M_050219_2,9710 SUDHL4_400M_050219_2,9710, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9711 55.301 266.0 37650.0 25 0 2811.6 -1 0 27 1167.189746081829 0 1167.189746081829 PEAK CID FTMS 0 0 0 -1 0 3 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.788 14573.0 1.0 3874 5835 9708 SUDHL4_400M_050219_2,9711 SUDHL4_400M_050219_2,9711, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9714 55.322 800.0 145180.0 25 0 30037.0 + 33925 SLGLLTLVK 9 105 472.3132809412013 942.6120089492024 2 472.3126403689384 MULTI CID FTMS 0 0 0 9713 137057.15625 0.5402263865920092 -13 0.1004486083984375 1 Unmodified _SLGLLTLVK_ REV__ENSG00000182885|ENST00000333493|ADGRG3 32.30548876998284 0.1201446275138228 6 [{I|L}T]{I|L}G{I|L}S{I|L}KV 9 -1 + 69.402 0.0 0.0 7.3627 7.3627 97.013 0.0 0.0 0.0 34.4530903966258 10.897316289502427 10.897316289502427 69.40188290748853 0 0.7302046884880937 2.0 0.2742275032520141 0.2302046884880938 [{I|L}T]{I|L}G{I|L}S{I|L}KV 7.3627 - 598 + 1 1.788 93351.8 0.3600000143051147 3875 5837 9713 SUDHL4_400M_050219_2,9714 SUDHL4_400M_050219_2,9714,SLGLLTLVK False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9715 55.336 800.0 158120.0 25 0 4962.4 + 40733 VLIDVGTGYYV 11 119 1198.6350391936087 1197.6277627270088 1 1198.637255847454 MULTI CID FTMS 0 0 0 9713 92194.359375 0.6727071655654282 10 -0.1436309814453125 2 Unmodified _VLIDVGTGYYV_ ENSG00000123349|ENST00000334478|PFDN5;ENST00000548984.1_1_12:53691573-53691735:+|nuORF;ENST00000552341.5_1_12:53691573-53693126:+|nuORF;ENST00000553171.1_1_12:53691669-53691972:+|nuORF;nc|ENSG00000123349|Q99471-3|PFDN5 114.6490535036381 0.024092277119725 6 [{I|L}V]EVVGTGYYV 11 2 + 83.03 0.0 0.0 6.9328 6.9328 81.998 0.0 0.0 0.0 4.981979378655865 50.4301299820184 4.981979378655865 1.249387366082999 0 1.7887254899964358 0.0 1.872363747448347 0.0 [{I|L}V]EVVGTGYYV;[{I|L}V]D{I|L}VGTGYYV;[{I|L}V]DV{I|L}GTGYYV;[{I|L}V]EVRTGYYV;[{I|L}V]D{I|L}RTGYYV;[{I|L}V]EVGS{I|L}GYYV;[{I|L}V]D{I|L}GS{I|L}GYYV;[{I|L}V]EVGVTGYYV;[{I|L}V]EVGSG{I|L}YYV;[{I|L}V]D{I|L}GVTGYYV 6.9328;6.8285;6.0873;5.9663;5.862;5.857;5.7527;5.7186;5.6172;5.6143 -;-;-;-;-;-;-;-;-;- 5253 1 1.788 79652.1 0.3799999952316284 3876 5837 9713 SUDHL4_400M_050219_2,9715 SUDHL4_400M_050219_2,9715,VLIDVGTGYYV True True VLIDVGTGYYV 55.33571 1198.63725584745 800959.4375 9713.0 nc|ENSG00000123349|Q99471-3|PFDN5;;ENSG00000123349|ENST00000334478|PFDN5;;ENST00000548984.1_1_12:53691573-53691735:+|nuORF;;ENST00000553171.1_1_12:53691669-53691972:+|nuORF;;ENST00000552341.5_1_12:53691573-53693126:+|nuORF 6.885168552398682 1.0 True 11.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9719 55.36 800.0 285640.0 25 0 15738.0 + 37613 TLLAGITGV 9 150 844.513512567994 843.5062361013939 1 844.5120727419853 MULTI CID FTMS 0 0 0 9718 200757.125 0.4227360209897041 -10 0.1021881103515625 1 Unmodified _TLLAGITGV_ ENSG00000165168|ENST00000378588|CYBB 136.33342141710068 0.015683453262119 6 [{I|L}T]{I|L}AG{I|L}TGV 9 0 + 109.97 0.0 0.0 13.037 13.037 92.026 0.0 0.0 0.0 31.41812778113055 14.973024840566469 14.973024840566469 6.878917298567487 0 1.9033306790097904 1.6989700043360187 2.41028795247598 0.0 + + [{I|L}T]{I|L}AG{I|L}TGV;[{I|L}T]GA{I|L}{I|L}TGV;[{I|L}T]{I|L}Q{I|L}TGV;[{I|L}T]{I|L}GA{I|L}TGV;[{I|L}T]{I|L}AGT{I|L}GV;[{I|L}T]Q{I|L}{I|L}TGV;[{I|L}T]{I|L}AG{I|L}GTV;[{I|L}T]{I|L}AVATGV;[{I|L}T]G{I|L}A{I|L}TGV;[{I|L}T]GA{I|L}T{I|L}GV 13.037;12.222;12.15;11.684;11.485;11.468;11.243;11.003;10.93;10.669 +;-;-;-;-;-;-;-;-;- + 4271 1 1.788 152100.3 0.4699999988079071 3877 5840 9718 SUDHL4_400M_050219_2,9719 SUDHL4_400M_050219_2,9719,TLLAGITGV True True TLLAGITGV 55.360099 844.512072741985 2135142.25 9718.0 ENSG00000165168|ENST00000378588|CYBB 8.636382738749186 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9723 55.384 800.0 132720.0 25 0 42055.0 + 37565 TLIGLSIKV 9 104 943.617645694411 942.6103692278108 1 943.6194335818292 MULTI CID FTMS 0 0 0 9722 47392.953125 0.2047619635903452 4 -0.0810546875 1 Unmodified _TLIGLSIKV_ ENSG00000166595|ENST00000422424|CIAO2B;ENST00000562362.5_1_16:66966108-66968009:-|nuORF;ENST00000569299.1_1_16:66967504-66968009:-|nuORF 74.19965305603844 0.0194755241623067 6 [{I|L}T]{I|L}G{I|L}S{I|L}KV 9 0 + 63.048 0.0 0.0 6.6886 6.6886 92.05 0.0 0.0 0.0 5.570743364174433 33.82142903284296 5.570743364174433 11.822581265925436 0 2.118415180652539 0.0 1.9802046884880933 0.0 + + [{I|L}T]{I|L}G{I|L}S{I|L}KV;{[TV]|[{I|L}S]}[{I|L}A]{I|L}S{I|L}KV;[{I|L}T][VG][{I|L}T]{I|L}KV;{[TV]|[{I|L}S]}{[VA]|[{I|L}G]}[{I|L}T]{I|L}KV;[{I|L}T]T[K{I|L}]{I|L}[VG]V 6.6886;5.4344;3.4334;2.4701;1.0553 +;-;-;-;- + 340 1 1.788 74598.4 0.6299999952316284 3878 5843 9722 SUDHL4_400M_050219_2,9723 SUDHL4_400M_050219_2,9723,TLIGLSIKV True True TLIGLSIKV 55.384434 943.619433581829 3214792.9375 9722.0 ENSG00000166595|ENST00000422424|CIAO2B;;ENST00000569299.1_1_16:66967504-66968009:-|nuORF;;ENST00000562362.5_1_16:66966108-66968009:-|nuORF 5.2674479484558105 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9724 55.398 800.0 177840.0 25 0 29934.0 + 11609 GLADKVYFL 9 127 513.2873004244266 1024.560047915653 2 513.2870971560478 MULTI CID FTMS 0 0 0 9722 82462.609375 0.108836853657273 -12 0.1101531982421875 2 Unmodified _GLADKVYFL_ ENSG00000084774|ENST00000264705|CAD 82.5293158979368 0.0169039238599547 6 {[VA]|[{I|L}G]}ATAAVY{M(Oxidation (M))|F}{I|L} 10 3 + 89.639 0.0 0.0 8.749 8.749 90.701 0.0 0.0 0.0 22.743500300354142 15.026975159433531 15.026975159433531 6.549471895720984 0 2.079689690656103 2.0 1.3539171939081172 0.0 {[VA]|[{I|L}G]}ATAAVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ATAYAV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ATAAYV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[SG]VAVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ATAY{M(Oxidation (M))|F}{I|L}G{I|L};{[VA]|[{I|L}G]}ADKVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ATYAAV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[SG]VYAV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ATYA{M(Oxidation (M))|F}{I|L}G{I|L};{[VA]|[{I|L}G]}[SG]VAYV{M(Oxidation (M))|F}{I|L} 8.749;8.1098;7.816;7.7531;7.7394;7.6521;7.4014;7.1138;7.031;6.82 -;-;-;-;-;+;-;-;-;- + 3706 1 1.788 109016.5 0.9200000166893004 3879 5843 9722 SUDHL4_400M_050219_2,9724 SUDHL4_400M_050219_2,9724,GLADKVYFL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9726 55.415 800.0 71665.0 25 0 3959.9 + 20251 LLDLKPELAAQ 11 88 605.8558757016499 1209.6971984700997 2 605.8556396365166 MULTI CID FTMS 0 0 0 9725 58258.78515625 0.5203856288316041 -6 0.0625648498535156 1 Unmodified _LLDLKPELAAQ_ REV__ENSG00000108465|ENST00000338399|CDK5RAP3;REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF;REV__nc|ENSG00000108465|Q96JB5-2|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-3|CDK5RAP3;REV__nc|ENSG00000108465|Q96JB5-4|CDK5RAP3 16.149105407346934 0.6992268271266642 6 [TP]AAVD{I|L}{I|L}{I|L} 9 -1 41.785 0.0 0.0 3.4542 0.0 0.0 0.0 313.1563140651003 313.1563140651003 -2.147119692780194 0.0 -2.147119692780194 0.0 0 0.3252574989159953 0.7958800173440752 1.1936726795685342 0.0 [TP]AAVD{I|L}{I|L}{I|L} 3.4542 - 596 1 1.788 45403.6 0.3400000035762787 3880 5844 9725 SUDHL4_400M_050219_2,9726 SUDHL4_400M_050219_2,9726,LLDLKPELAAQ False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9727 55.422 425.0 237010.0 25 0 38923.0 + 35699 SVFPRAVAL 9 93 480.2875548566485 958.560556780097 2 480.2874023318291 MULTI CID FTMS 0 0 0 9725 155976.765625 0.1411504781901903 -25 0.2996330261230469 2 Unmodified _SVFPRAVAL_ REV__ENSG00000213903|ENST00000345363|LTB4R 34.10243960390752 0.1078313939113124 6 [VS]{M(Oxidation (M))|F}{I|L}[RP]Q{I|L} 8 -1 + 54.084 0.0 0.0 5.6422 5.6422 79.824 0.0 0.0 0.0 38.39767802270331 7.786596949921218 7.786596949921218 2.156818820794939 0 0.6643943297944485 2.0 0.0 0.805462187404089 [VS]{M(Oxidation (M))|F}{I|L}[RP]Q{I|L};[VS]{M(Oxidation (M))|F}P[R{I|L}]Q{I|L};[VS]{M(Oxidation (M))|F}{I|L}[HK][KT];[VS]{I|L}{M(Oxidation (M))|F}[RP]Q{I|L};[VS]{M(Oxidation (M))|F}{I|L}[RP][AG]{I|L};[VS]{I|L}M[R{I|L}]Q{I|L};[VS]{M(Oxidation (M))|F}P[R{I|L}][AG]{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}SVV{I|L}{M(Oxidation (M))|F}[PA];[VS]{I|L}{M(Oxidation (M))|F}[HK][KT];{[QV]|[N{I|L}]|[RA]|[KV]}SVV{M(Oxidation (M))|F}{I|L}[PA] 5.6422;5.4172;4.7219;4.4513;4.2788;4.2263;4.0538;4.0112;3.9282;3.2175 -;-;-;-;-;-;-;-;-;- 301 + 1 1.788 79653.1 1.0 3881 5844 9725 SUDHL4_400M_050219_2,9727 SUDHL4_400M_050219_2,9727,SVFPRAVAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9728 55.436 800.0 81702.0 25 0 3610.1 + -1 YIGPVLVSV 9 100 946.5617802163272 0 946.5627319216728 PEAK CID FTMS 0 0 0 9725 87622.9921875 1.0 0 0.0 3 ENSG00000197879|ENST00000648651|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C;nc|ENSG00000197879|O00159-2|MYO1C 6 S{I|L}YV{I|L}G 6 -1 33.761 0.0 0.0 1.7852 0.0 0.0 1062.646984649648 193.0983523004516 1255.7453369500995 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 S{I|L}YV{I|L}G 1.7852 - 766 + 1 1.788 49462.4 0.3700000047683716 3882 5844 9725 SUDHL4_400M_050219_2,9728 SUDHL4_400M_050219_2,9728, False False YIGPVLVSV 55.436065 946.562731921673 318329.125 9725.0 ENSG00000197879|ENST00000648651|MYO1C;;nc|ENSG00000197879|O00159-3|MYO1C;;nc|ENSG00000197879|O00159-2|MYO1C 4.162125905354817 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9731 55.449 277.0 272130.0 25 0 21383.0 + 43310 WLAEKLPTL 9 99 535.8169039195247 1069.6192549058494 2 535.8159057497978 MULTI CID FTMS 0 0 0 9730 155660.8125 0.2813495934812402 -15 0.1822319030761718 1 Unmodified _WLAEKLPTL_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 34.221707139014875 0.1071766711162635 6 W{I|L}AE[K{I|L}]PT{I|L} 9 0 + 59.95 0.0 0.0 5.6048 5.6048 88.159 0.0 0.0 0.0 31.21600731282193 6.651647407659915 6.651647407659915 9.50781977329818 0 0.9802046884880936 2.0 0.3807196863200844 0.0 + + W{I|L}AE[K{I|L}]PT{I|L};W{I|L}{[TV]|[{I|L}S]}[Q{I|L}]PT{I|L};[TP][KP]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}[PA];[VP]{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}[PA];{[QN]|[E{I|L}]|[KN]}K{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}{I|L}[PA];[{I|L}P]{[NV]|[RG]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}[PA] 5.6048;4.7159;1.7916;0.54516;0.51715;0.51715 +;-;-;-;-;- + 412 + 1 1.788 64199.3 1.0 3883 5846 9730 SUDHL4_400M_050219_2,9731 SUDHL4_400M_050219_2,9731,WLAEKLPTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9736 55.472 462.0 141160.0 25 0 20365.0 + 14806 ILEENIPVL 9 88 520.30546721113 1038.59638148906 2 520.3055908083916 MULTI CID FTMS 0 0 0 9735 103757.5703125 0.6339443958678624 -6 0.0628318786621093 1 Unmodified _ILEENIPVL_ chr20:50830380-50876486|48|24.4|0.99|4.62|+|ENST00000445038|BCAS4,BCAS4;ENSG00000124243|ENST00000371608|BCAS4;ENST00000485049.1_1_20:49411653-49449308:+|nuORF;nc|ENSG00000124243|Q8TDM0-2|BCAS4;nc|ENSG00000124243|Q8TDM0-3|BCAS4;nc|ENSG00000124243|Q8TDM0|BCAS4 54.773552608820026 0.0299037012502309 6 {[QV]|[N{I|L}]|[RA]|[KV]}EE{I|L}{I|L} 6 4 43.35 0.0 0.0 4.1739 0.0 0.0 0.0 324.1938164346128 324.1938164346128 9.06295947543775 0.0 0.0 0.0 0 0.4247425010840047 1.0457574905606752 0.3494850021680094 0.8494850021680094 {[QV]|[N{I|L}]|[RA]|[KV]}EE{I|L}{I|L} 4.1739 - 372 1 1.788 58752.1 1.0 3884 5850 9735 SUDHL4_400M_050219_2,9736 SUDHL4_400M_050219_2,9736,ILEENIPVL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9741 55.499 686.0 139160.0 25 0 8644.8 + -1 QLIDGILYA 9 86 1005.5626942094344 0 1005.563281238079 PEAK CID FTMS 0 0 0 9740 99387.4453125 0.8375600900448696 4 -0.0505752563476562 1 ENSG00000115524|ENST00000335508|SF3B1 6 AY{I|L}{I|L}QD 6 -1 55.553 0.0 0.0 2.765 0.0 0.0 1022.5641702703448 280.16623865299067 1302.7304089233355 0.0 0.0 0.0 0.0 0 0.0 0.0 1.4049471895720984 1.274227503252014 AY{I|L}{I|L}QD 2.765 - 1611 + 1 1.788 68204.8 1.0 3885 5854 9740 SUDHL4_400M_050219_2,9741 SUDHL4_400M_050219_2,9741, False False QLIDGILYA 55.498542 1005.56328123808 975223.25 9740.0 ENSG00000115524|ENST00000335508|SF3B1 4.550434271494548 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9742 55.512 800.0 31816.0 25 0 5851.1 -1 0 32 1087.5272658869806 0 1087.521655261517 PEAK CID FTMS 0 0 0 9740 76800.65625 0.9093795617061822 -1 0.0040626525878906 2 6 C(Carbamidomethyl (C))HMAW 5 -1 23.443 0.0 0.0 1.0788 0.0 0.0 789.4034564792363 695.3724459283811 1484.7759024076174 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C))HMAW 1.0788 - 29 + 1 1.788 24480.9 0.4300000071525574 3886 5854 9740 SUDHL4_400M_050219_2,9742 SUDHL4_400M_050219_2,9742, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9746 55.535 660.0 223900.0 25 0 31423.0 + 11611 GLADKVYFL 9 91 1025.570710686031 1024.563434219431 1 1025.571582019329 MULTI CID FTMS 0 0 0 9745 127794.1171875 0.8823812422348991 -2 0.0081253051757812 1 Unmodified _GLADKVYFL_ ENSG00000084774|ENST00000264705|CAD 82.5293158979368 0.0169039238599547 6 {[VA]|[{I|L}G]}ADKVY{M(Oxidation (M))|F}{I|L} 9 0 + 101.19 0.0 0.0 9.8768 9.8768 96.097 0.0 0.0 0.0 22.798859261803983 16.478174818886373 16.478174818886373 11.237125054200234 0 1.610924374808178 1.6989700043360187 1.524227503252014 0.0 + + {[VA]|[{I|L}G]}ADKVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ADKYV{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ADVKY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[SG]VAVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ADKV{M(Oxidation (M))|F}Y{I|L};{[VA]|[{I|L}G]}A[TA]AVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[SG]{I|L}GVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}A[VS]GVY{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AVAVY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}ADKY{M(Oxidation (M))|F}V{I|L} 9.8768;8.7801;8.7801;8.3681;8.3062;8.1963;7.8371;7.6653;7.6516;7.5532 +;-;-;-;-;-;-;-;-;- + 3320 1 1.788 104623.6 1.0 3887 5857 9745 SUDHL4_400M_050219_2,9746 SUDHL4_400M_050219_2,9746,GLADKVYFL True True GLADKVYFL 55.534606 1025.57158201933 9209251.375 9745.0 ENSG00000084774|ENST00000264705|CAD 8.787282466888428 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9749 55.555 800.0 123980.0 25 0 11660.0 + 42760 VVGGVIVAV 9 109 812.5239892062356 811.5167127396355 1 812.5241577029228 MULTI CID FTMS 0 0 0 9748 85647.640625 0.3357894617547773 20 -0.4988212585449219 1 Unmodified _VVGGVIVAV_ REV__ENSG00000162512|ENST00000339394|SDC3 45.7499826716795 0.0496882803020414 6 {I|L}{I|L}QG{I|L}VAV 8 -1 + 62.063 0.0 0.0 7.6477 7.6477 82.504 0.0 0.0 0.0 1.4625056246163837 16.40978057358332 1.4625056246163837 0.4845500650402812 0 0.9489700043360187 1.2218487496163564 0.0 0.0 {I|L}{I|L}QG{I|L}VAV;{I|L}{I|L}QG{I|L}G{I|L}V;{I|L}{I|L}GAG{I|L}VAV;{I|L}{I|L}GAG{I|L}G{I|L}V;{[VA]|[{I|L}G]}AAV{I|L}VAV;{[VA]|[{I|L}G]}AAV{I|L}G{I|L}V;{I|L}{I|L}GQ{I|L}VAV;{I|L}{I|L}GQ{I|L}G{I|L}V;{I|L}{I|L}NA{I|L}VAV;{I|L}{I|L}QAVVAV 7.6477;7.588;7.5847;7.525;7.4675;7.4078;7.3744;7.3147;7.2768;7.2768 -;-;-;-;-;-;-;-;-;- 5218 1 1.788 70234.6 0.3700000047683716 3888 5859 9748 SUDHL4_400M_050219_2,9749 SUDHL4_400M_050219_2,9749,VVGGVIVAV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9750 55.569 800.0 54633.0 25 0 7149.7 -1 0 70 895.6079589724541 0 895.6079589724541 PEAK CID FTMS 0 0 0 -1 0 2 6 {M(Oxidation (M))|F} 1 -1 5.4846 0.0 0.0 0.30654 0.0 0.0 1036.8090443103392 602.3028048150999 1639.1118491254392 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.30654 - 14 + 1 1.788 36450.2 0.3499999940395355 3889 5859 9748 SUDHL4_400M_050219_2,9750 SUDHL4_400M_050219_2,9750, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9752 55.585 800.0 120710.0 25 0 19361.0 19791 LGSLLKLSL 9 117 472.3132809412013 942.6120089492024 2 472.3129150271416 MULTI CID FTMS 0 0 0 9751 75851.2734375 0.2989764306272265 10 -0.2364883422851562 1 Unmodified _LGSLLKLSL_ ENSG00000070269|ENST00000261556|TMEM260;ENST00000557626.5_1_14:57046563-57082746:+|nuORF;ENST00000557657.5_1_14:57046563-57079004:+|nuORF;nc|ENSG00000070269|Q9NX78-2|TMEM260;nc|ENSG00000070269|Q9NX78-3|TMEM260 26.88365393820708 0.1891292719743517 6 [{I|L}T]{I|L}G{I|L}S{I|L}KV 9 6 + 58.488 0.0 0.0 6.2049 6.2049 86.317 0.0 0.0 0.0 37.904780596613705 8.746272777757568 8.746272777757568 6.989700043360188 0 0.7302046884880937 2.0 0.0 0.2134679910804404 [{I|L}T]{I|L}G{I|L}S{I|L}KV;[{I|L}T]{I|L}VAS{I|L}KV 6.2049;5.4634 -;- 399 + 1 1.788 79213.9 1.0 3890 5860 9751 SUDHL4_400M_050219_2,9752 SUDHL4_400M_050219_2,9752,LGSLLKLSL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9753 55.599 800.0 166810.0 25 0 24467.0 + 11742 GLIEILKKV 9 104 506.84207373002056 1011.6695945268413 2 506.8419067263603 MULTI CID FTMS 0 0 0 9751 83204.328125 0.3840788803667485 -3 0.0483856201171875 2 Unmodified _GLIEILKKV_ ENSG00000105185|ENST00000590247|PDCD5 81.89019881105858 0.0170587746866453 6 VA{I|L}E{I|L}{I|L}KKV 9 2 + 105.03 0.0 0.0 10.382 10.382 99.843 0.0 0.0 0.0 62.97782449510585 12.587418566968154 12.587418566968154 105.03382536405589 0 1.860924374808178 2.0 0.4247425010840047 0.2614393726401688 VA{I|L}E{I|L}{I|L}KKV 10.382 - 1107 + 1 1.788 105737.9 0.3400000035762787 3891 5860 9751 SUDHL4_400M_050219_2,9753 SUDHL4_400M_050219_2,9753,GLIEILKKV True True GLIEILKKV 55.599085 506.84190672636 1060184.875 9751.0 ENSG00000105185|ENST00000590247|PDCD5 5.918557643890381 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9754 55.611 676.0 219800.0 25 0 28549.0 + 34460 SLYPSIMMA 9 96 1012.4845301775084 1011.4772537109084 1 1012.486010730267 MULTI CID FTMS 0 0 0 9751 132335.890625 0.6910533224585923 -2 0.0343093872070312 3 Unmodified _SLYPSIMMA_ ENSG00000062822|ENST00000440232|POLD1 139.54400939418784 0.0223610778938538 6 {[TV]|[{I|L}S]}YPS{I|L}MMA 9 0 + 89.879 0.0 0.0 8.8859 8.8859 90.159 0.0 0.0 0.0 10.505215510555033 16.478174818886373 10.505215510555033 5.5102999566398125 0 1.960409376976188 1.3010299956639813 2.298455006504028 0.0 + + {[TV]|[{I|L}S]}YPS{I|L}MMA;{[TV]|[{I|L}S]}PYS{I|L}MMA;{[TV]|[{I|L}S]}PMTVYMA;[PS]{I|L}YS{I|L}MMA;{[TV]|[{I|L}S]}{M(Oxidation (M))|F}{I|L}S{I|L}MMA;{[TV]|[{I|L}S]}YPSM{I|L}MA;[PS]{I|L}MTVYMA;{[TV]|[{I|L}S]}PMTVMYA;[PS]Y{I|L}S{I|L}MMA;{[TV]|[{I|L}S]}MPTVYMA 8.8859;8.3411;8.0149;7.8473;7.6967;7.5726;7.5211;7.4715;7.2028;7.1529 +;-;-;-;-;-;-;-;-;- + 4350 1 1.788 103223.6 1.0 3892 5860 9751 SUDHL4_400M_050219_2,9754 SUDHL4_400M_050219_2,9754,SLYPSIMMA True True SLYPSIMMA 55.610902 1012.48601073027 1550215.25 9751.0 ENSG00000062822|ENST00000440232|POLD1 8.05281654993693 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9756 55.62 295.0 227410.0 25 0 31111.0 + 33763 SLAQYLINA 9 100 496.77458951905874 991.5346261049176 2 496.7740356326103 MULTI CID FTMS 0 0 0 9755 165766.1875 0.5412084809208461 -2 0.072235107421875 1 Unmodified _SLAQYLINA_ ENSG00000169564|ENST00000303577|PCBP1;ENSG00000183570|ENST00000681687|PCBP3;nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-4|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3 58.6788170122104 0.0268135626297836 6 {[TV]|[{I|L}S]}AQY{I|L} 6 3 42.507 0.0 0.0 4.287 0.0 0.0 0.0 313.15294820868627 313.15294820868627 21.82805599595417 0.0 0.0 0.0 0 0.0 2.0 1.7408427761594596 0.0 + {[TV]|[{I|L}S]}AQY{I|L} 4.287 + + 383 1 1.788 59979.4 1.0 3893 5861 9755 SUDHL4_400M_050219_2,9756 SUDHL4_400M_050219_2,9756,SLAQYLINA True True SLAQYLINA 55.620173 496.77403563261 1441549.75 9755.0 nc|ENSG00000183570|P57721-5|PCBP3;;ENSG00000183570|ENST00000681687|PCBP3;;nc|ENSG00000183570|P57721-3|PCBP3;;nc|ENSG00000183570|P57721-2|PCBP3;;ENSG00000169564|ENST00000303577|PCBP1;;nc|ENSG00000183570|P57721-4|PCBP3 1.86042129000028 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9757 55.634 800.0 347480.0 25 0 213930.0 + 31351 RMVLSLQL 8 54 959.5672270636118 958.5599505970116 1 959.5663940310478 MULTI CID FTMS 0 0 0 9755 189347.984375 0.6472777020969662 -5 0.0944328308105468 2 Unmodified _RMVLSLQL_ REV__ENSG00000160888|ENST00000292433|IER2 13.90604991867851 0.7054780292895731 6 {I|L}Q{I|L} 3 -1 21.682 0.0 0.0 2.262 0.0 0.0 586.3234120099625 0.0 586.3234120099625 0.0 6.989700043360188 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}Q{I|L} 2.262 + + 22 1 1.788 190613.6 0.5899999737739563 3894 5861 9755 SUDHL4_400M_050219_2,9757 SUDHL4_400M_050219_2,9757,RMVLSLQL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9758 55.648 800.0 45984.0 25 0 15250.0 32916 SEKHYNLN 8 49 1004.4752480498385 1003.4679715832384 1 1004.236071765423 MULTI CID FTMS 0 0 0 9755 66671.328125 1.0 0 0.0 3 Unmodified _SEKHYNLN_ ENSG00000148357|ENST00000683500|HMCN2;nc|ENSG00000148357|Q8NDA2-1|HMCN2;nc|ENSG00000148357|Q8NDA2-4|HMCN2 2.577480529830294 0.808687252328423 6 [MN]V{I|L} 4 7 13.812 0.0 0.0 1.3765 0.0 0.0 0.0 543.2082003229124 543.2082003229124 9.832881222565248 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [MN]V{I|L} 1.3765 - 15 + 1 1.788 31226.1 0.9800000190734864 3895 5861 9755 SUDHL4_400M_050219_2,9758 SUDHL4_400M_050219_2,9758,SEKHYNLN False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9760 55.653 114.0 462780.0 25 0 75511.0 + 11610 GLADKVYFL 9 71 513.2873004244266 1024.560047915653 2 513.2871581912041 MULTI CID FTMS 0 0 0 9759 408646.59375 0.5393451633243552 7 -0.1536293029785156 1 Unmodified _GLADKVYFL_ ENSG00000084774|ENST00000264705|CAD 34.40172386719151 0.1061884637610825 6 {[VA]|[{I|L}G]}[SG]VVAY{M(Oxidation (M))|F}{I|L} 10 4 + 62.299 0.0 0.0 6.0805 6.0805 81.733 0.0 0.0 0.0 18.802112417116064 15.026975159433531 15.026975159433531 2.6722032235195314 0 1.218765315847925 2.0 1.1237125054200234 0.0 {[VA]|[{I|L}G]}[SG]VVAY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[SG]VY{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[TA]AVAY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[TA]AY{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[SG]VY{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{I|L};{[VA]|[{I|L}G]}[TA]AY{M(Oxidation (M))|F}{[VA]|[{I|L}G]}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AVVAY{M(Oxidation (M))|F}{I|L};{[VA]|[{I|L}G]}[TA][Q{I|L}]Y{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AVY{[VA]|[{I|L}G]}{M(Oxidation (M))|F}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VAVAY{M(Oxidation (M))|F}{I|L} 6.0805;5.8197;5.351;5.0902;5.0379;4.3084;4.2454;4.0854;3.9846;3.5159 -;-;-;-;-;-;-;-;-;- 376 1 1.788 46082.9 1.0 3896 5862 9759 SUDHL4_400M_050219_2,9760 SUDHL4_400M_050219_2,9760,GLADKVYFL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9763 55.666 359.0 411090.0 25 0 43133.0 + 40705 VLGIVVGV 8 76 755.5024850765539 754.4952086099538 1 755.5024291872978 MULTI CID FTMS 0 0 0 9762 269228.25 0.6707304046973606 4 -0.1270904541015625 1 Unmodified _VLGIVVGV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1 77.1959498837818 0.1016809512730457 6 VVA{I|L}VVGV 8 2 + 75.17 0.0 0.0 9.963 9.963 85.353 0.0 0.0 0.0 1.0921451867560137 16.40978057358332 1.0921451867560137 1.0921451867560137 0 1.0044321917401078 1.3979400086720375 0.0 0.0 VVA{I|L}VVGV;[{I|L}V]G{I|L}VVGV;[{I|L}V]AVVVGV;VVAV{I|L}VGV;[{I|L}V]GV{I|L}VGV;{[VA]|[{I|L}G]}V{I|L}VVGV;VVA{I|L}VGVV;VV{I|L}AVVGV;[{I|L}V]G{I|L}VGVV;[{I|L}V]VAVVGV 9.963;9.8182;9.4192;9.1008;8.956;8.8032;8.8015;8.6982;8.6568;8.5535 -;+;-;-;-;-;-;-;-;- + 2020 1 1.788 107460.3 1.0 3897 5864 9762 SUDHL4_400M_050219_2,9763 SUDHL4_400M_050219_2,9763,VLGIVVGV True True VLGIVVGV 55.665747 755.502429187298 2123348.5 9762.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 2.0798438688119254 1.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9764 55.68 800.0 142380.0 25 0 13581.0 + 31087 RLLDYVVNI 9 98 552.8245709080803 1103.6345888829603 2 552.8240234255791 MULTI CID FTMS 0 0 0 9762 90464.484375 0.4282405804819598 -3 0.045806884765625 2 Unmodified _RLLDYVVNI_ ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2;nc|ENSG00000197256|Q63ZY3-3|KANK2 33.4449034751529 0.1114409586740657 6 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVN{I|L} 9 2 + 63.183 0.0 0.0 5.725 5.725 84.931 0.0 0.0 0.0 7.275071725447404 16.478174818886373 7.275071725447404 7.275071725447404 0 0.9247425010840048 0.744727494896694 0.0 0.7614393726401688 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVN{I|L};[R{I|L}]{I|L}DYVVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVGG{I|L};[R{I|L}]{I|L}DYVVGG{I|L};[R{I|L}]{I|L}DYAA{[VA]|[{I|L}G]}{I|L} 5.725;5.0658;4.8906;4.2315;1.2622 -;+;-;-;- + 138 1 1.788 95095.9 0.3700000047683716 3898 5864 9762 SUDHL4_400M_050219_2,9764 SUDHL4_400M_050219_2,9764,RLLDYVVNI True True RLLDYVVNI 55.679591 552.824023425579 1338712.625 9762.0 ENSG00000197256|ENST00000586659|KANK2;;nc|ENSG00000197256|Q63ZY3-3|KANK2;;nc|ENSG00000197256|Q63ZY3-2|KANK2 6.398256619771321 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9766 55.684 60.0 1219800.0 25 0 236290.0 + 35700 SVFPRAVAL 9 80 480.2875548566485 958.560556780097 2 480.2874023318291 MULTI CID FTMS 0 0 0 9765 992875.625 0.8984983673085709 -4 0.0687026977539062 1 Unmodified _SVFPRAVAL_ REV__ENSG00000213903|ENST00000345363|LTB4R 28.486842064014134 0.1687311288560894 6 [VS]{M(Oxidation (M))|F}P 4 -1 38.94 0.0 0.0 4.0624 0.0 0.0 0.0 525.3165377252561 525.3165377252561 25.84121882396211 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [VS]{M(Oxidation (M))|F}P 4.0624 + + 87 + 1 1.788 61192.3 1.0 3899 5865 9765 SUDHL4_400M_050219_2,9766 SUDHL4_400M_050219_2,9766,SVFPRAVAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9767 55.699 800.0 56628.0 25 0 3330.1 + 28522 PTLQRRLQQA 10 90 605.8559700831073 0 605.8554565310478 PEAK CID FTMS 0 0 0 9765 89737.0234375 0.941580143885529 -4 0.0687026977539062 2 Unmodified _PTLQRRLQQA_ REV__CON__Q32PJ2 13.90604991867851 0.345182617568752 6 {I|L}{I|L}{I|L}DVA 6 -1 16.208 0.0 0.0 1.3398 0.0 0.0 316.172559207427 266.1156099908813 582.2881691983083 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{I|L}DVA 1.3398 - 194 + 1 1.788 36991.2 0.3499999940395355 3900 5865 9765 SUDHL4_400M_050219_2,9767 SUDHL4_400M_050219_2,9767,PTLQRRLQQA False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9769 55.705 176.0 534410.0 25 0 52651.0 + 43311 WLAEKLPTL 9 99 535.8169039195247 1069.6192549058494 2 535.8162109255791 MULTI CID FTMS 0 0 0 9768 342712.03125 0.619435869084376 5 -0.1362533569335937 1 Unmodified _WLAEKLPTL_ ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-2|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5 53.31671820480216 0.0330978755772958 6 W{I|L}AEK{I|L}PT{I|L} 9 0 + 78.781 0.0 0.0 7.3653 7.3653 95.134 0.0 0.0 0.0 52.12154944704244 14.01938214796202 14.01938214796202 19.50441289091095 0 1.305462187404089 2.0 0.8996498648046141 0.0 + + W{I|L}AEK{I|L}PT{I|L};W{I|L}{[TV]|[{I|L}S]}Q{I|L}PT{I|L};W{I|L}{[TV]|[{I|L}S]}[AG]{I|L}PT{I|L};[W{I|L}]A{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}{I|L}[PA];{[VA]|[{I|L}G]}S[KS]RAA{I|L}[PA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[KS]RAA{I|L}[PA];[TP][KP]{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}[PA];{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}{I|L}{[TV]|[{I|L}S]}{[TV]|[{I|L}S]}{I|L}[PA];[{I|L}P]{[NV]|[RG]}{M(Oxidation (M))|F}{[TV]|[{I|L}S]}{I|L}[PA] 7.3653;5.5418;4.6809;2.1019;1.5863;1.4501;1.3621;0.16745;0.087656 +;-;-;-;-;-;-;-;- + 426 + 1 1.798 76290.6 1.0 3901 5866 9768 SUDHL4_400M_050219_2,9769 SUDHL4_400M_050219_2,9769,WLAEKLPTL True True WLAEKLPTL 55.705418 535.816210925579 7021316.5 9768.0 ENSG00000175216|ENST00000529230|CKAP5;;nc|ENSG00000175216|Q14008-3|CKAP5;;nc|ENSG00000175216|Q14008-2|CKAP5 6.190115133921306 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9770 55.713 420.0 273030.0 25 0 16932.0 + 1680 ALPEAIAAL 9 96 868.5143020948465 867.5070256282464 1 868.5143310427666 MULTI CID FTMS 0 0 0 9768 292052.34375 1.0 0 0.0 2 Unmodified _ALPEAIAAL_ ENSG00000185347|ENST00000392523|TEDC1;ENST00000460959.5_1_14:105957646-105957931:+|nuORF;ENST00000546536.5_1_14:105957646-105963882:+|nuORF;nc|ENSG00000185347|Q86SX3-2|TEDC1;nc|ENSG00000185347|Q86SX3-6|TEDC1 25.399314129420983 0.2080152500878129 6 [EP]A{I|L}A{I|L}AA{I|L} 9 4 + 73.879 0.0 0.0 8.5162 8.5162 87.31 0.0 0.0 0.0 23.402114527360283 61.227496652734246 23.402114527360283 3.0102999566398125 0 0.0 1.0457574905606752 0.5796896906561032 0.0 [EP]A{I|L}A{I|L}AA{I|L};[EP]A{I|L}AA{I|L}A{I|L};[EP]A{I|L}AAA{I|L}{I|L};[EP]{I|L}AA{I|L}AA{I|L};[EP]AA{I|L}{I|L}AA{I|L};[EP]{I|L}AAA{I|L}A{I|L};[EP]AA{I|L}A{I|L}A{I|L};[EP]A{I|L}{I|L}AAA{I|L};[EP]{I|L}AAAA{I|L}{I|L};[EP]AA{I|L}AA{I|L}{I|L} 8.5162;8.1692;7.6192;7.6192;7.5061;7.2722;7.1591;7.0114;6.7223;6.6091 -;-;-;-;-;-;-;-;-;- 750 1 1.798 79116.9 1.0 3902 5866 9768 SUDHL4_400M_050219_2,9770 SUDHL4_400M_050219_2,9770,ALPEAIAAL False True ALPEAIAAL 55.712924 868.514331042767 1439252.75 9768.0 nc|ENSG00000185347|Q86SX3-6|TEDC1;;ENSG00000185347|ENST00000392523|TEDC1;;ENST00000546536.5_1_14:105957646-105963882:+|nuORF;;ENST00000460959.5_1_14:105957646-105957931:+|nuORF;;nc|ENSG00000185347|Q86SX3-2|TEDC1 2.8820539315541587 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9771 55.727 800.0 76192.0 25 0 3418.7 + 10392 FSVEGQLEF 9 107 1055.5044773788975 1054.4972009122976 1 1055.508471667767 MULTI CID FTMS 0 0 0 9768 181863.59375 1.0 0 0.0 3 Unmodified _FSVEGQLEF_ ENSG00000080824|ENST00000216281|HSP90AA1;ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000378770.1_1_4:190394307-190396341:+|nuORF;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000205100|Q58FG1|HSP90AA4P;nc|ENSG00000224411|Q14568|HSP90AA2P 61.60191391372663 0.0251951588191061 6 {[QG]|[NA]}E{I|L}[YG]{I|L}E{M(Oxidation (M))|F} 9 5 + 64.275 0.0 0.0 6.0953 6.0953 78.318 0.0 0.0 0.0 10.954839578393347 42.32029823457559 10.954839578393347 0.2766762543934362 0 0.3054621874040891 0.0 2.1549471895720984 0.3807196863200844 {[QG]|[NA]}E{I|L}[YG]{I|L}E{M(Oxidation (M))|F};{[QG]|[NA]}E{I|L}VC{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QG]|[NA]}E{I|L}AP{M(Oxidation (M))|F}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QG]|[NA]}E{I|L}{M(Oxidation (M))|F}SVE{M(Oxidation (M))|F};{[QG]|[NA]}E{I|L}E[VS]{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QG]|[NA]}EVS{M(Oxidation (M))|F}{I|L}E{M(Oxidation (M))|F};{[QG]|[NA]}E[PA]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QG]|[NA]}{I|L}E[YG]{I|L}E{M(Oxidation (M))|F};{[QG]|[NA]}{I|L}EVC{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F};{[QG]|[NA]}EVSE{I|L}{M(Oxidation (M))|F}{M(Oxidation (M))|F} 6.0953;6.0691;5.6161;5.5904;5.5514;5.4936;5.1256;5.1216;5.0953;4.9981 -;-;-;-;-;-;-;-;-;- 1622 1 1.798 43808.0 0.7400000095367432 3903 5866 9768 SUDHL4_400M_050219_2,9771 SUDHL4_400M_050219_2,9771,FSVEGQLEF True False FSVEGQLEF 55.726789 1055.50847166777 1334932.375 9768.0 nc|ENSG00000080824|P07900-2|HSP90AA1;;ENST00000554401.1_1_14:102549349-102551760:-|nuORF;;ENSG00000096384|ENST00000371646|HSP90AB1;;nc|ENSG00000224411|Q14568|HSP90AA2P;;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;;ENSG00000080824|ENST00000216281|HSP90AA1;;nc|ENSG00000183199|Q58FF7|HSP90AB3P;;nc|ENSG00000205100|Q58FG1|HSP90AA4P;;ENST00000378770.1_1_4:190394307-190396341:+|nuORF 5.342822233835856 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9772 55.741 800.0 43000.0 25 0 4384.1 + 9752 FMLPDPQNI 9 49 1074.5275432152384 1073.5202667486385 1 1075.666674792767 MULTI CID FTMS 0 0 0 -1 0 4 Unmodified _FMLPDPQNI_ ENSG00000198860|ENST00000645668|TSEN15;ENST00000423257.1_1_17:17360441-17360570:+|nuORF;ENST00000485209.5_1_1:184027321-184041978:+|nuORF 6.2057823575117 0.6980434486082533 6 {I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 3 7 10.458 0.0 0.0 0.97414 0.0 0.0 683.33321904671 0.0 683.33321904671 0.0 2.2134030500787816 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]} 0.97414 - 4 1 1.798 32071.0 0.7200000286102295 3904 5866 9768 SUDHL4_400M_050219_2,9772 SUDHL4_400M_050219_2,9772,FMLPDPQNI False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9773 55.752 668.0 67456.0 25 0 1104.4 -1 0 95 895.9864277652526 0 895.5050536990166 PEAK CID FTMS 0 0 0 9768 32385.48828125 0.6070546960880571 -1 0.0185050964355468 5 6 AT 2 -1 7.9588 0.0 0.0 0.44464 0.0 0.0 1377.7991972279676 237.05176721744377 1614.8509644454114 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AT 0.44464 - 43 + 1 1.798 34887.1 1.0 3905 5866 9768 SUDHL4_400M_050219_2,9773 SUDHL4_400M_050219_2,9773, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9774 55.758 311.0 52437.0 25 0 4666.7 -1 0 50 831.6038696169853 0 831.6038696169853 PEAK CID FTMS 0 0 0 -1 0 6 6 N 1 -1 5.4846 0.0 0.0 0.33016 0.0 0.0 666.0379871814331 878.0864351861936 1544.1244223676267 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.33016 - 1 + 1 1.798 21113.9 1.0 3906 5866 9768 SUDHL4_400M_050219_2,9774 SUDHL4_400M_050219_2,9774, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9776 55.774 800.0 19919.0 25 0 4450.9 -1 0 35 1001.168872058392 0 1001.168872058392 PEAK CID FTMS 0 0 0 -1 0 1 6 T 1 -1 5.4846 0.0 0.0 0.27418 0.0 0.0 1386.9785389392464 509.2725924127562 1896.2511313520024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.27418 - 1 + 1 1.798 21916.9 0.3899999856948852 3907 5867 9775 SUDHL4_400M_050219_2,9776 SUDHL4_400M_050219_2,9776, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9777 55.779 264.0 234240.0 25 0 33919.0 + + 19197 ALHDILTEI 9 82 512.7874427997763 0 512.7874023318291 PEAK CID FTMS 0 0 0 9775 225829.546875 1.0 0 0.0 2 Unmodified _LEFVGSFLL_ ENSG00000111445|ENST00000454402|RFC5;nc|ENSG00000111445|P40937-2|RFC5 21.74664581756881 0.185237546287679 6 ET{I|L}A{I|L} 5 -1 24.341 0.0 0.0 2.3781 0.0 0.0 244.17808276576503 249.0633791559204 493.2414619216854 0.0 0.0 0.0 0.0 0 0.0 0.0 0.805462187404089 0.0 ET{I|L}A{I|L} 2.3781 - 287 + 1 1.798 52327.0 1.0 3908 5867 9775 SUDHL4_400M_050219_2,9777 SUDHL4_400M_050219_2,9777,LEFVGSFLL False False ALHDILTEI 55.779288 512.787402331829 3175778.25 9775.0 ENSG00000111445|ENST00000454402|RFC5;;nc|ENSG00000111445|P40937-2|RFC5 1.5267197489738464 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9778 55.784 242.0 243460.0 25 0 18155.0 + 20489 LLLDVPTAAV 10 91 506.3084631006514 1010.6023732681028 2 506.3081848025322 MULTI CID FTMS 0 0 0 9775 220352.484375 0.1487284255306152 -6 0.1470832824707031 3 Unmodified _LLLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 26.88365393820708 0.3646707531412818 6 {I|L}{I|L}DV{I|L} 5 6 31.655 0.0 0.0 3.1323 0.0 0.0 0.0 454.2310335419498 454.2310335419498 -0.2158246484152748 0.0 -0.2158246484152748 0.0 0 0.5 1.6989700043360187 0.0 0.0 {I|L}{I|L}DV{I|L} 3.1323 - 491 1 1.798 49888.3 1.0 3909 5867 9775 SUDHL4_400M_050219_2,9778 SUDHL4_400M_050219_2,9778,LLLDVPTAAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9780 55.802 800.0 188740.0 25 0 5642.4 + 37959 TMIVSLAAV 9 112 904.5179090581588 903.5106325915586 1 904.5199462771416 MULTI CID FTMS 0 0 0 9779 63667.2265625 0.375598708878502 1 -0.0177154541015625 1 Unmodified _TMIVSLAAV_ ENSG00000170540|ENST00000304414|ARL6IP1;nc|ENSG00000170540|Q15041-2|ARL6IP1 104.79918948944588 0.0084531067040494 6 [MT]{I|L}VS{I|L}AAV 9 0 + 78.755 0.0 0.0 8.7165 8.7165 85.871 0.0 0.0 0.0 22.218487496163554 11.989700043360171 11.989700043360171 1.7898452254070634 0 0.8945990182825423 1.5228787452803376 2.1549471895720984 0.0 + + [MT]{I|L}VS{I|L}AAV;[MT]{I|L}SV{I|L}AAV;[MT]{I|L}VSA{I|L}AV;[MT]{I|L}SVA{I|L}AV;[MT]{I|L}SA{I|L}VAV;[MT]{I|L}VATVAV;[MT]{I|L}VS{I|L}AG{I|L};[MT]{I|L}AS{I|L}VAV;[MT]{I|L}SAV{I|L}AV;[MT]{I|L}SV{I|L}AG{I|L} 8.7165;8.5184;8.1427;7.9446;7.5529;7.406;7.3895;7.2909;7.195;7.1914 +;-;-;-;-;-;-;-;-;- + 4752 1 1.798 102126.3 0.4900000095367431 3910 5868 9779 SUDHL4_400M_050219_2,9780 SUDHL4_400M_050219_2,9780,TMIVSLAAV True True TMIVSLAAV 55.801513 904.519946277142 831789.9375 9779.0 ENSG00000170540|ENST00000304414|ARL6IP1;;nc|ENSG00000170540|Q15041-2|ARL6IP1 5.810837427775065 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9783 55.821 724.0 99760.0 25 0 17565.0 1804 ALSSLLHAL 9 83 462.779646278 923.5447396228 2 462.7791931033134 MULTI CID FTMS 0 0 0 9782 54294.828125 0.369958197938611 -1 0.0038909912109375 1 Unmodified _ALSSLLHAL_ ENST00000483233.5_1_3:52003252-52003432:-|nuORF 38.15118350030904 0.0856056900103839 6 [{I|L}A]SS{I|L}{I|L}H[{I|L}A] 9 0 + 49.292 0.0 0.0 5.3373 5.3373 89.171 0.0 0.0 0.0 11.927154324026963 2.3764301679958777 2.3764301679958777 17.931825014007217 0 0.7742275032520141 2.0 0.0 0.0 + + [{I|L}A]SS{I|L}{I|L}H[{I|L}A];[{I|L}A]{[WT]|[RM]}{I|L}H[{I|L}A] 5.3373;3.3957 +;- + 232 + 1 1.798 61730.8 1.0 3911 5870 9782 SUDHL4_400M_050219_2,9783 SUDHL4_400M_050219_2,9783,ALSSLLHAL True True ALSSLIHAL 55.820502 462.779193103313 364691.09375 9782.0 ENSG00000079246|ENST00000392132|XRCC5 3.9510167439778647 2.0 False 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9784 55.834 800.0 28326.0 25 0 1795.3 -1 0 48 1080.8594066978203 3239.556390693662 3 1081.532031238079 MULTI CID FTMS 0 0 0 9782 72454.671875 0.8967423344139328 -2 0.0216064453125 2 6 K 1 -1 6.9897 0.0 0.0 0.21576 0.0 0.0 2589.1990875007914 519.2296846979124 3108.428772198704 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.21576 - 10 + 1 1.798 23734.4 0.3499999940395355 3912 5870 9782 SUDHL4_400M_050219_2,9784 SUDHL4_400M_050219_2,9784, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9787 55.855 800.0 142640.0 25 0 23894.0 + 20436 LLIFTEGAAV 10 100 517.299334401205 1032.58411586921 2 517.2989990115166 MULTI CID FTMS 0 0 0 9786 86056.4765625 0.1251114223820101 -5 0.0802345275878906 1 Unmodified _LLIFTEGAAV_ ENSG00000165204|ENST00000277309|OR1K1 52.268347100219714 0.0668375294751462 6 {I|L}{I|L}{I|L}DV[YQ]AV 9 5 + 85.882 0.0 0.0 8.3172 8.3172 88.268 0.0 0.0 0.0 36.47817481888637 12.04628427264403 12.04628427264403 4.005149978319906 0 1.9049471895720984 2.0 0.0 0.0 {I|L}{I|L}{I|L}DV[YQ]AV;{I|L}{I|L}VEV[YQ]AV;{I|L}{I|L}{I|L}DV[YQ]G{I|L};{I|L}{I|L}VEV[YQ]G{I|L};{I|L}{I|L}{I|L}C(Carbamidomethyl (C))[HK]H{I|L};{I|L}{I|L}{I|L}[CG][HK]H{I|L};{I|L}{I|L}{I|L}D[PA]PP[TP];{I|L}{I|L}D{I|L}[PA]PP[TP];{I|L}{I|L}D[PA]{I|L}PP[TP];{I|L}CPP{I|L}[Q{I|L}]H{I|L} 8.3172;7.9293;7.1506;6.7627;5.7764;4.8794;4.128;3.2583;2.7741;2.0155 -;-;-;-;-;-;-;-;-;- 512 + 1 1.798 91885.0 0.4199999868869781 3913 5872 9786 SUDHL4_400M_050219_2,9787 SUDHL4_400M_050219_2,9787,LLIFTEGAAV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9788 55.866 641.0 127610.0 25 0 27427.0 + 44112 YLAHFIEGL 9 89 531.7849647107068 1061.5553764882136 2 531.7850219607353 MULTI CID FTMS 0 0 0 9786 84192.890625 1.0 0 0.0 2 Unmodified _YLAHFIEGL_ ENSG00000132953|ENST00000255305|XPO4 40.44857923139169 0.0729940656229577 6 [HA]{M(Oxidation (M))|F}{I|L}Y{I|L}EG{I|L} 9 4 + 59.09 0.0 0.0 5.5664 5.5664 78.12 0.0 0.0 0.0 1.249387366082999 16.478174818886373 1.249387366082999 1.249387366082999 0 0.9247425010840048 0.0 0.0 0.0 [HA]{M(Oxidation (M))|F}{I|L}Y{I|L}EG{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L}Y{I|L}EG{I|L};[Y{I|L}][HA]{M(Oxidation (M))|F}{I|L}EG{I|L};[HA]{M(Oxidation (M))|F}{I|L}YE{I|L}G{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}AY{I|L}EG{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}A{I|L}YE{I|L}G{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}{I|L}S{M(Oxidation (M))|F}{I|L}EG{I|L};[HA]{M(Oxidation (M))|F}{I|L}{I|L}YEG{I|L};[HA]{M(Oxidation (M))|F}{I|L}E{I|L}YG{I|L};[HA]{I|L}{M(Oxidation (M))|F}Y{I|L}EG{I|L} 5.5664;5.4487;5.2346;5.1915;5.1651;5.0738;5.0034;4.9993;4.9511;4.908 -;-;+;-;-;-;-;-;-;- + 1133 1 1.798 67619.0 1.0 3914 5872 9786 SUDHL4_400M_050219_2,9788 SUDHL4_400M_050219_2,9788,YLAHFIEGL True True YLAHFIEGL 55.865775 531.785021960735 381309.65625 9786.0 ENSG00000132953|ENST00000255305|XPO4 5.54517920811971 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9789 55.875 505.0 280500.0 25 0 58498.0 + 14785 ILDPHVVLL 9 111 509.8186925986829 1017.6228322641658 2 509.8185607790947 MULTI CID FTMS 0 0 0 9786 119258.109375 0.1467773485951909 -6 0.1401100158691406 3 Unmodified _ILDPHVVLL_ ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF 57.47134341890925 0.0274820932774257 6 {I|L}{I|L}DP 4 5 55.138 0.0 0.0 5.4183 0.0 0.0 0.0 576.3516329400999 576.3516329400999 14.076126379047622 0.0 0.0 0.0 0 0.6861818737241735 2.0 0.5 0.0 + {I|L}{I|L}DP 5.4183 + + 1765 + 1 1.798 112721.1 1.0 3915 5872 9786 SUDHL4_400M_050219_2,9789 SUDHL4_400M_050219_2,9789,ILDPHVVLL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9790 55.889 800.0 134710.0 25 0 10463.0 -1 0 94 942.4487955669844 1882.8830382007689 2 942.442919909954 MULTI CID FTMS 0 0 0 9786 103962.1796875 1.0 0 0.0 4 6 [YQ][HS]EAQQNA{M(Oxidation (M))|F}YW[{I|L}V] 15 -1 + 91.582 0.0 0.0 4.8639 4.8639 78.18 0.0 0.0 0.0 8.907854813243986 2.1868801865088017 2.1868801865088017 3.0102999566398125 0 0.4247425010840047 1.6989700043360187 0.0 1.0501648626366045 [YQ][HS]EAQQNA{M(Oxidation (M))|F}YW[{I|L}V];[YQ]{M(Oxidation (M))|F}[YG]GQQNA{M(Oxidation (M))|F}YW[{I|L}V];[YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}YW[{I|L}V];[YQ]V[HM]GQQNA{M(Oxidation (M))|F}YW[{I|L}V];{[QV]|[N{I|L}]|[RA]|[KV]}[C(Carbamidomethyl (C))Q]EAQQNA{M(Oxidation (M))|F}YW[{I|L}V];[YQ][HS]EAQ[AG]NA{M(Oxidation (M))|F}YW[{I|L}V];[YQ][HS]EA[AG]QNA{M(Oxidation (M))|F}YW[{I|L}V];[YQ][HS]EAQQGGA{M(Oxidation (M))|F}YW[{I|L}V];[YQ]{M(Oxidation (M))|F}[YG]GQQNA{M(Oxidation (M))|F}Y{[DA]|[EG]}[{I|L}V];[YQ]{M(Oxidation (M))|F}[YG]G[AG]QNA{M(Oxidation (M))|F}YW[{I|L}V] 4.8639;4.704;4.6685;4.4506;4.3908;4.3843;4.3843;4.3843;4.2244;4.2244 -;-;-;-;-;-;-;-;-;- 5603 1 1.798 76224.4 0.4199999868869781 3916 5872 9786 SUDHL4_400M_050219_2,9790 SUDHL4_400M_050219_2,9790, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9793 55.909 800.0 144360.0 25 0 15907.0 + 7863 ELLKYLEEI 9 113 575.3240770147437 1148.6336010962873 2 575.3240844607353 MULTI CID FTMS 0 0 0 9792 100674.3671875 0.5951545751733299 -3 0.0581130981445312 1 Unmodified _ELLKYLEEI_ REV__ENSG00000127603|ENST00000564288|MACF1;REV__nc|ENSG00000127603|Q9UPN3-2|MACF1;REV__nc|ENSG00000127603|Q9UPN3-3|MACF1;REV__nc|ENSG00000127603|Q9UPN3-4|MACF1;REV__nc|ENSG00000127603|Q9UPN3|MACF1 59.05245873256422 0.0266066919017776 6 {[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L} 9 -1 + 86.947 0.0 0.0 7.5696 7.5696 85.353 0.0 0.0 0.0 2.5 16.478174818886373 2.5 2.5 0 1.0 0.6777807052660807 1.555462187404089 0.0 {[QN]|[E{I|L}]|[KN]}Y{I|L}K{I|L}EE{I|L};[Y{I|L}]E{I|L}K{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KY{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}Y{I|L}KE{I|L}E{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}YK{I|L}EE{I|L};[Y{I|L}]E{I|L}KE{I|L}E{I|L};[K{I|L}]{I|L}EY{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}KYE{I|L}E{I|L};{I|L}{I|L}KEY{I|L}EE{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}YKE{I|L}E{I|L} 7.5696;7.3519;6.9216;6.8105;6.7434;6.5929;6.1636;6.1625;6.1388;5.9844 -;-;+;-;-;-;-;-;-;- + 1376 1 1.798 91510.4 0.4399999976158142 3917 5874 9792 SUDHL4_400M_050219_2,9793 SUDHL4_400M_050219_2,9793,ELLKYLEEI False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9794 55.923 800.0 121080.0 25 0 11213.0 + 9754 FMLPDPQNI 9 122 537.7681266760115 1073.521700418823 2 537.7677490115166 MULTI CID FTMS 0 0 0 9792 101339.171875 1.0 0 0.0 2 Unmodified _FMLPDPQNI_ ENSG00000198860|ENST00000645668|TSEN15;ENST00000423257.1_1_17:17360441-17360570:+|nuORF;ENST00000485209.5_1_1:184027321-184041978:+|nuORF 64.23631603340823 0.0237365939569086 6 [{I|L}V]EE[DP]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 9 6 + 53.094 0.0 0.0 4.9458 4.9458 79.174 0.0 0.0 0.0 3.6366712033788673 4.762036441594191 3.6366712033788673 3.6366712033788673 0 1.424742501084005 2.0 0.3494850021680094 0.0 [{I|L}V]EE[DP]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}{I|L}E[DP]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}VE[DP]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}[DP][QP]N{I|L};{I|L}{I|L}DE[DP]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[QN]|[E{I|L}]|[KN]}{I|L}D[DP]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{NN|[MP]|[D{I|L}]|[EV]}PQ[QT]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[QP]D[WR]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}[DP][QP]QV;{I|L}{I|L}ED[DP]{I|L}{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]} 4.9458;4.6071;3.9183;3.3772;3.2388;3.1935;2.9044;2.8196;2.8164;2.5139 -;-;-;+;-;-;-;-;-;- + 672 1 1.798 79426.6 0.449999988079071 3918 5874 9792 SUDHL4_400M_050219_2,9794 SUDHL4_400M_050219_2,9794,FMLPDPQNI True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9796 55.939 800.0 90347.0 25 0 6232.6 + 10601 FVIDLQTRL 9 81 552.8245709080803 1103.6345888829603 2 552.8244506716728 MULTI CID FTMS 0 0 0 9795 69783.28125 0.3303399458571872 8 -0.1720848083496093 1 Unmodified _FVLKKNENL_ ENST00000492779.5_1_20:34292405-34320086:-|nuORF;nc|ENSG00000131051|Q14498-3|RBM39;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;ENSG00000131051|ENST00000253363|RBM39;ENST00000429968.5_1_20:34292405-34322136:-|nuORF 27.628801355627647 0.1796483985696185 6 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVN{I|L} 9 5 + 46.418 0.0 0.0 4.2059 4.2059 82.366 0.0 0.0 0.0 4.167724800373449 23.88743756437101 4.167724800373449 9.208187539523747 0 0.7302046884880937 0.0 0.0 0.3252574989159953 {NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVN{I|L};{NN|[MP]|[D{I|L}]|[EV]}[R{I|L}]YVVGG{I|L} 4.2059;3.3716 -;- 87 1 1.798 62743.1 0.3899999856948852 3919 5875 9795 SUDHL4_400M_050219_2,9796 SUDHL4_400M_050219_2,9796,FVLKKNENL False False FVIDLQTRL 55.939048 552.824450671673 1338712.625 9795.0 ENST00000492779.5_1_20:34292405-34320086:-|nuORF;;nc|ENSG00000131051|Q14498-3|RBM39;;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;;ENSG00000131051|ENST00000253363|RBM39;;ENST00000429968.5_1_20:34292405-34322136:-|nuORF -0.1111087501049041 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9797 55.947 431.0 107200.0 25 0 12995.0 -1 LIDLLTCTT 9 68 525.2823074201026 1048.550061907005 2 525.2822143435478 MULTI CID FTMS 0 0 0 9795 223422.203125 1.0 0 0.0 2 Carbamidomethyl (C) _LIDLLTC(Carbamidomethyl (C))TT_ ENSG00000181009|ENST00000641181|OR52N5 15.847184025352805 0.4077185912009129 6 {I|L}{I|L}{I|L}D 4 -1 44.769 0.0 0.0 4.2696 0.0 0.0 0.0 591.2510470025999 591.2510470025999 19.80835659879972 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}{I|L}D 4.2696 - 65 + 1 1.798 41105.8 1.0 3920 5875 9795 SUDHL4_400M_050219_2,9797 SUDHL4_400M_050219_2,9797,LIDLLTCTT False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9798 55.961 800.0 82129.0 25 0 13695.0 + -1 LLLSLQEMS 9 98 350.52333724901337 0 350.5232116580009 PEAK CID FTMS 0 0 0 9795 92184.4140625 0.7183312460444801 -2 0.0341415405273437 3 Oxidation (M) _LLLSLQEM(Oxidation (M))S_ REV__ENSG00000136152|ENST00000349995|COG3 7.608950283845883 0.3396988645791728 6 {I|L} 1 -1 5.4846 0.0 0.0 0.78459 0.0 0.0 500.8585050870908 82.06699548892811 582.925500576019 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.78459 + + 10 + 1 1.798 55726.3 0.9900000095367432 3921 5875 9795 SUDHL4_400M_050219_2,9798 SUDHL4_400M_050219_2,9798,LLLSLQEMS False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9799 55.973 723.0 324840.0 25 0 37500.0 + 1667 ALNVDLTEF 9 117 1021.5204070416904 1020.5131305750904 1 1021.52061766386 MULTI CID FTMS 0 0 0 9795 125686.859375 0.4881111501016792 -6 0.1211585998535156 4 Unmodified _ALNVDLTEF_ ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000167552|ENST00000301071|TUBA1A;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000183785|ENST00000330423|TUBA8;ENSG00000198033|ENST00000400113|TUBA3C;ENSG00000243910|ENST00000490341|TUBA4B;ENST00000442868.1_1_1:202822165-202825009:-|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000183785|Q9NY65-2|TUBA8;nc|ENSG00000198033|P0DPH7-2|TUBA3C 110.6747026088012 0.0053351249510064 6 [{I|L}A]NVD{I|L}TE{M(Oxidation (M))|F} 9 0 + 98.968 0.0 0.0 9.6978 9.6978 92.261 0.0 0.0 0.0 13.15552802072581 14.973024840566469 13.15552802072581 7.7815125038364386 0 1.2104093769761877 1.5228787452803376 1.2059771852360797 1.274227503252014 + + [{I|L}A]NVD{I|L}TE{M(Oxidation (M))|F};[{I|L}A]NDV{I|L}TE{M(Oxidation (M))|F};[{I|L}A]NVDT{I|L}E{M(Oxidation (M))|F};[{I|L}A]DRG{I|L}TE{M(Oxidation (M))|F};[{I|L}A]NVEVTE{M(Oxidation (M))|F};{[NV]|[RG]}D{I|L}A{I|L}TE{M(Oxidation (M))|F};[{I|L}A]DVN{I|L}TE{M(Oxidation (M))|F};[{I|L}A]DNV{I|L}TE{M(Oxidation (M))|F};[{I|L}A]NDVT{I|L}E{M(Oxidation (M))|F};{[NV]|[RG]}{I|L}DA{I|L}TE{M(Oxidation (M))|F} 9.6978;8.9353;8.8214;8.5179;8.4716;8.4087;8.3454;8.3454;8.0589;7.8188 +;-;-;-;-;-;-;-;-;- + 12732 1 1.798 149404.8 1.0 3922 5875 9795 SUDHL4_400M_050219_2,9799 SUDHL4_400M_050219_2,9799,ALNVDLTEF True True ALNVDLTEF 55.973123 1021.52061766386 1640584.625 9795.0 ENSG00000123416|ENST00000336023|TUBA1B;;ENSG00000127824|ENST00000248437|TUBA4A;;ENSG00000243910|ENST00000490341|TUBA4B;;ENST00000442868.1_1_1:202822165-202825009:-|nuORF;;ENSG00000183785|ENST00000330423|TUBA8;;ENSG00000152086|ENST00000312988|TUBA3E;;ENSG00000167553|ENST00000301072|TUBA1C;;nc|ENSG00000183785|Q9NY65-2|TUBA8;;ENSG00000167552|ENST00000301071|TUBA1A;;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;;ENSG00000075886|ENST00000321253|TUBA3D;;ENSG00000198033|ENST00000400113|TUBA3C;;nc|ENSG00000167552|Q71U36-2|TUBA1A;;nc|ENSG00000198033|P0DPH7-2|TUBA3C;;nc|ENSG00000123416|P68363-2|TUBA1B;;nc|ENSG00000127824|P68366-2|TUBA4A 5.517231464385986 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9801 55.981 186.0 269010.0 25 0 51919.0 + + 35701 SVFPGARLL 9 59 480.2875548566485 958.560556780097 2 480.2872192263603 MULTI CID FTMS 0 0 0 9800 228136.28125 0.206450909928395 7 -0.1216354370117187 1 Unmodified _SVFPRAVAL_ nc|ENSG00000142453|Q86X55-2|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1;ENSG00000142453|ENST00000327064|CARM1 21.74664581756881 0.2544899275067181 6 [VS]{M(Oxidation (M))|F}P 4 -1 40.445 0.0 0.0 4.2194 0.0 0.0 0.0 525.3175753229124 525.3175753229124 28.85151878060192 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 [VS]{M(Oxidation (M))|F}P 4.2194 + + 20 + 1 1.798 42130.2 1.0 3923 5876 9800 SUDHL4_400M_050219_2,9801 SUDHL4_400M_050219_2,9801,SVFPRAVAL False False SVFPGARLL 55.980581 480.28721922636 9901052.0 9800.0 nc|ENSG00000142453|Q86X55-2|CARM1;;nc|ENSG00000142453|Q86X55-1|CARM1;;ENSG00000142453|ENST00000327064|CARM1 2.129630049069722 2.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9802 55.989 495.0 231190.0 25 0 30458.0 + 19946 LIDRALSSF 9 106 511.2871019658669 1020.5596509985336 2 511.2870971560478 MULTI CID FTMS 0 0 0 9800 124628.5625 0.6963270583336207 2 -0.0340957641601562 2 Unmodified _LIDRALSSF_ REV__ENSG00000143545|ENST00000368575|RAB13 62.57269311338072 0.0246576765497938 6 {I|L}{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SS{M(Oxidation (M))|F} 9 -1 + 62.659 0.0 0.0 6.1397 6.1397 91.291 0.0 0.0 0.0 3.5912122129838124 44.058867815920095 3.5912122129838124 15.27310937020446 0 1.305462187404089 1.6989700043360187 0.805462187404089 0.0 {I|L}{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}SS{M(Oxidation (M))|F};{I|L}{I|L}{[SA]|[TG]}[R{I|L}]DS{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[{I|L}A][R{I|L}]DS{M(Oxidation (M))|F};{I|L}{I|L}{[SA]|[TG]}[R{I|L}]SD{M(Oxidation (M))|F};{I|L}{I|L}D{[QV]|[N{I|L}]|[RA]|[KV]}{[WT]|[RM]}{M(Oxidation (M))|F};{[TV]|[{I|L}S]}[{I|L}A][R{I|L}]SD{M(Oxidation (M))|F} 6.1397;4.6432;3.5256;3.2695;2.7572;2.1519 +;-;-;-;-;- + 335 1 1.798 91062.3 1.0 3924 5876 9800 SUDHL4_400M_050219_2,9802 SUDHL4_400M_050219_2,9802,LIDRALSSF False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9803 56.003 800.0 184020.0 25 0 21276.0 + 14787 ILDPHVVLL 9 65 1018.6302683024426 1017.6229918358424 1 1018.629321277142 MULTI CID FTMS 0 0 0 9800 93191.3828125 0.6917948591251641 -4 0.1349029541015625 3 Unmodified _ILDPHVVLL_ ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF 30.63653989081413 0.1413794767160703 6 [HV]PV{I|L}EV{I|L}{I|L} 9 6 + 51.604 0.0 0.0 5.071 5.071 78.818 0.0 0.0 0.0 4.137342758552691 33.84668253115892 4.137342758552691 3.0102999566398125 0 0.0 0.0 0.0 0.0 [HV]PV{I|L}EV{I|L}{I|L};[HV]PV{I|L}D{I|L}{I|L}{I|L};[HV]PV{I|L}{I|L}D{I|L}{I|L};[HV]P{I|L}VEV{I|L}{I|L};[HV]P{I|L}EVV{I|L}{I|L};[HV]P{I|L}VD{I|L}{I|L}{I|L};[HV]PVE{I|L}V{I|L}{I|L};[HV]P{I|L}V{I|L}D{I|L}{I|L};[HV]PVEV{I|L}{I|L}{I|L};[HV]P{I|L}D{I|L}V{I|L}{I|L} 5.071;4.7752;4.68;4.6022;4.3064;4.3064;4.3064;4.2111;4.0105;3.8375 -;-;-;-;-;-;-;-;-;- 560 1 1.798 102678.1 0.4099999964237213 3925 5876 9800 SUDHL4_400M_050219_2,9803 SUDHL4_400M_050219_2,9803,ILDPHVVLL False True ILDPHVVLL 56.003197 1018.62932127714 9165911.9375 9800.0 ENST00000574867.5_1_17:5292093-5322970:-|nuORF;;ENSG00000108559|ENST00000573584|NUP88 5.620288610458374 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9806 56.024 800.0 319730.0 25 0 207710.0 + 40738 VLIEVSFGGL 10 39 1033.589922142723 1032.582645676123 1 1033.589038074017 MULTI CID FTMS 0 0 0 9805 270667.84375 0.9169107581598755 3 -0.0532417297363281 1 Unmodified _VLIEVSFGGL_ REV__ENST00000504557.1_1_12:54396627-54396660:+|nuORF 6.2057823575117 0.6979311171683138 6 V 1 -1 6.9897 0.0 0.0 0.67691 0.0 0.0 454.2779675039602 476.21299158267817 930.4909590866384 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.67691 + + 2 + 1 1.798 172500.6 0.6100000143051147 3926 5878 9805 SUDHL4_400M_050219_2,9806 SUDHL4_400M_050219_2,9806,VLIEVSFGGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9807 56.037 800.0 25836.0 25 0 1541.9 -1 0 63 953.502988954754 0 953.5148803591728 PEAK CID FTMS 0 0 0 -1 0 2 6 Q 1 -1 6.9897 0.0 0.0 0.36692 0.0 0.0 1254.6338943140015 519.2640474908811 1773.8979418048823 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.36692 - 12 + 1 1.798 24396.0 0.3899999856948852 3927 5878 9805 SUDHL4_400M_050219_2,9807 SUDHL4_400M_050219_2,9807, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9809 56.043 47.0 883540.0 25 0 77267.0 + 20490 LLLDVPTAAV 10 74 506.3084631006514 1010.6023732681028 2 506.3082153201103 MULTI CID FTMS 0 0 0 9808 1089981.0 0.7356901758929194 6 -0.077728271484375 1 Unmodified _LLLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 20.453626601364224 0.5043500229302764 6 {I|L}{I|L}DV{I|L} 5 6 36.923 0.0 0.0 3.6536 0.0 0.0 0.0 454.2315858744625 454.2315858744625 11.759687322722812 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.0 0.0 {I|L}{I|L}DV{I|L} 3.6536 - 151 1 1.798 38866.0 1.0 3928 5879 9808 SUDHL4_400M_050219_2,9809 SUDHL4_400M_050219_2,9809,LLLDVPTAAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9810 56.057 800.0 138660.0 25 0 30693.0 + 9753 FMLPDPQNI 9 68 1074.5275432152384 1073.5202667486385 1 1074.523974597454 MULTI CID FTMS 0 0 0 9808 88945.734375 0.7530174127754007 6 -0.077728271484375 2 Unmodified _FMLPDPQNI_ ENSG00000198860|ENST00000645668|TSEN15;ENST00000423257.1_1_17:17360441-17360570:+|nuORF;ENST00000485209.5_1_1:184027321-184041978:+|nuORF 38.17557092003332 0.0854718145212029 6 DP{I|L}{M(Oxidation (M))|F}{I|L} 5 6 39.024 0.0 0.0 3.6351 0.0 0.0 470.2496189986809 0.0 470.2496189986809 0.0 18.450528104279016 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 DP{I|L}{M(Oxidation (M))|F}{I|L} 3.6351 - 77 1 1.798 74419.5 0.9700000286102296 3929 5879 9808 SUDHL4_400M_050219_2,9810 SUDHL4_400M_050219_2,9810,FMLPDPQNI True False FMLPDPQNI 56.056509 1074.52397459745 1644941.0625 9808.0 ENSG00000198860|ENST00000645668|TSEN15;;ENST00000423257.1_1_17:17360441-17360570:+|nuORF;;ENST00000485209.5_1_1:184027321-184041978:+|nuORF 7.07861852645874 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9813 56.077 800.0 146770.0 25 0 10348.0 + + 27227 ASSPGILVL 9 116 856.5172450716478 855.5099686050478 1 856.5126830935478 MULTI CID FTMS 0 0 0 9812 93820.6171875 0.2678270923363296 8 -0.1258544921875 1 Unmodified _PGLSLASVL_ nc|ENSG00000102606|Q14155-2|ARHGEF7;nc|ENSG00000102606|Q14155-6|ARHGEF7;ENST00000483189.1_1_13:111893629-111928079:+|nuORF;nc|ENSG00000102606|Q14155-1|ARHGEF7;nc|ENSG00000102606|Q14155-5|ARHGEF7;nc|ENSG00000102606|Q14155|ARHGEF7;nc|ENSG00000102606|Q14155-3|ARHGEF7;ENSG00000102606|ENST00000646102|ARHGEF7 36.04419817259434 0.0971720506436186 6 [{I|L}V]APVSAS{I|L} 9 -1 + 38.492 0.0 0.0 4.4993 4.4993 74.578 0.0 0.0 0.0 1.383026981662816 16.47817481888638 1.383026981662816 1.383026981662816 0 0.0 0.0 0.7302046884880937 0.0 [{I|L}V]APVSAS{I|L};[PG]{I|L}{I|L}VSAS{I|L};[{I|L}V]N{[DA]|[EG]}{I|L}V{I|L};{[VA]|[{I|L}G]}P{I|L}VSAS{I|L};[{I|L}V]APVASS{I|L};[PG]{I|L}{I|L}VASS{I|L};[{I|L}V]NV{[CP]|[EA]}V{I|L};[{I|L}V]APSVAS{I|L};[PG]{I|L}A{[CA]|SS}{I|L}V{I|L};[{I|L}V]A[DN]{I|L}V{I|L} 4.4993;4.3377;4.3151;3.9858;3.8439;3.6822;3.6726;3.664;3.6492;3.6114 -;-;-;-;-;-;-;-;-;- 1504 1 1.798 81370.5 0.3799999952316284 3930 5881 9812 SUDHL4_400M_050219_2,9813 SUDHL4_400M_050219_2,9813,PGLSLASVL False False ASSPGILVL 56.076849 856.512683093548 1697203.25 9812.0 nc|ENSG00000102606|Q14155-2|ARHGEF7;;nc|ENSG00000102606|Q14155-6|ARHGEF7;;ENST00000483189.1_1_13:111893629-111928079:+|nuORF;;nc|ENSG00000102606|Q14155-1|ARHGEF7;;nc|ENSG00000102606|Q14155-5|ARHGEF7;;nc|ENSG00000102606|Q14155|ARHGEF7;;nc|ENSG00000102606|Q14155-3|ARHGEF7;;ENSG00000102606|ENST00000646102|ARHGEF7 4.476508220036824 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9814 56.091 800.0 78438.0 25 0 15947.0 + 20295 LLDVPTAAV 9 95 898.5237402801193 897.5164638135193 1 898.5281860232353 MULTI CID FTMS 0 0 0 9812 91282.3984375 0.9856501303245232 -9 0.2222404479980468 2 Unmodified _LLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 48.345845343767074 0.0439967357579942 6 [TP]AAV{I|L}EVV 9 8 + 48.981 0.0 0.0 5.4574 5.4574 82.281 0.0 0.0 0.0 10.791812460476253 16.478174818886373 10.791812460476253 4.9434157707161575 0 0.0 0.0 1.0387254899964358 0.0 [TP]AAV{I|L}EVV;[TP]AAV[RN]AV;[TP]AA{I|L}VEVV;[TP]AA[RN]VAV;[TP]AA[RN]AVV;[TP]AA{I|L}[KQ]AV;[TP]AA[KQ]{I|L}AV;[PA]TAV{I|L}EVV;[PA]TAV[RN]AV;[PA]TA{I|L}VEVV 5.4574;4.9066;4.8649;4.7241;4.6353;4.3141;4.3141;4.255;3.7042;3.6625 -;-;-;-;-;-;-;-;-;- 538 1 1.798 46888.9 0.4099999964237213 3931 5881 9812 SUDHL4_400M_050219_2,9814 SUDHL4_400M_050219_2,9814,LLDVPTAAV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9817 56.111 800.0 149410.0 25 0 19341.0 + 11615 GLADPGIITI 10 80 969.5609802488312 968.5537037822312 1 969.5576049685478 MULTI CID FTMS 0 0 0 9816 100609.4453125 0.8537132423108684 1 -0.0163993835449218 1 Unmodified _GLADPGIITI_ nc|ENSG00000196873|Q5JTY5-2|ZNG1C 123.45060196383646 0.0002228281112883 6 {[VA]|[{I|L}G]}PDQ{I|L}{I|L}T{I|L} 9 3 + 80.803 0.0 0.0 8.3427 8.3427 82.92 0.0 0.0 0.0 9.208187539523747 16.478174818886373 9.208187539523747 0.0616686753686224 0 0.6139829889124311 1.3979400086720375 1.385151878060192 0.0 {[VA]|[{I|L}G]}PDQ{I|L}{I|L}T{I|L};{[VA]|[{I|L}G]}P{I|L}GEG{I|L}T{I|L};{[VA]|[{I|L}G]}PGEG{I|L}{I|L}T{I|L};{[VA]|[{I|L}G]}PDAG{I|L}{I|L}T{I|L};{[VA]|[{I|L}G]}P{I|L}DQ{I|L}T{I|L};{[VA]|[{I|L}G]}P{I|L}DAG{I|L}T{I|L};{[VA]|[{I|L}G]}P{I|L}GDA{I|L}T{I|L};{[VA]|[{I|L}G]}PGDA{I|L}{I|L}T{I|L};{[VA]|[{I|L}G]}PDGA{I|L}{I|L}T{I|L};{[VA]|[{I|L}G]}ADPG{I|L}{I|L}T{I|L} 8.3427;8.3363;8.2137;8.2137;8.2018;8.1545;8.0728;7.9419;7.9419;7.9128 -;-;-;-;-;-;-;-;-;+ + 3604 1 1.798 85870.5 0.449999988079071 3932 5883 9816 SUDHL4_400M_050219_2,9817 SUDHL4_400M_050219_2,9817,GLADPGIITI True True GLADPGIITI 56.111161 969.557604968548 0.0 9816.0 nc|ENSG00000196873|Q5JTY5-2|ZNG1C 5.515619119008382 1.0 True 10.0 False nc_isoform PXD020620_cell_line SUDHL4_400M_050219_2 9820 56.12 132.0 586040.0 25 0 139010.0 + 14786 ILDPHVVLL 9 82 509.8186925986829 1017.6228322641658 2 509.8185607790947 MULTI CID FTMS 0 0 0 9819 418638.46875 0.5152408065589936 7 -0.1075325012207031 1 Unmodified _ILDPHVVLL_ ENSG00000108559|ENST00000573584|NUP88;ENST00000574867.5_1_17:5292093-5322970:-|nuORF 50.855029805455786 0.0384952370514206 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}D{I|L}{I|L}{I|L} 9 6 + 62.357 0.0 0.0 6.1277 6.1277 82.384 0.0 0.0 0.0 3.979400086720375 16.478174818886373 3.979400086720375 3.0102999566398125 0 0.7742275032520141 0.0 0.0 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}D{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVD{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}[YR]D{I|L}{I|L}{I|L};[HV]PV{I|L}D{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VV{I|L}EV{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VVEV{I|L}{I|L}{I|L};{[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}VDV{I|L}{I|L}{I|L}{I|L};{I|L}{I|L}D[YR]{I|L}{I|L}{I|L};[HV]VP{I|L}D{I|L}{I|L}{I|L};[HV]PVD{I|L}{I|L}{I|L}{I|L} 6.1277;5.8319;5.7366;5.7366;5.6588;5.6588;5.536;5.4671;5.4408;5.4408 -;-;-;-;-;-;-;-;-;- 881 1 1.798 64662.1 1.0 3933 5885 9819 SUDHL4_400M_050219_2,9820 SUDHL4_400M_050219_2,9820,ILDPHVVLL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9821 56.134 800.0 51910.0 25 0 1053.5 -1 0 85 1120.205737292767 0 1120.205737292767 PEAK CID FTMS 0 0 0 -1 0 2 6 D 1 -1 4.6041 0.0 0.0 0.20569 0.0 0.0 1118.9170155017466 1001.446908819006 2120.3639243207526 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.20569 - 5 + 1 1.798 33406.5 0.949999988079071 3934 5885 9819 SUDHL4_400M_050219_2,9821 SUDHL4_400M_050219_2,9821, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9822 56.148 800.0 367760.0 25 0 39083.0 + 38008 TPAARPRAV 9 217 938.5555810343408 937.5483045677406 1 938.5548583865166 MULTI CID FTMS 0 0 0 9819 138080.125 0.9101172115533056 -4 0.0547561645507812 3 Unmodified _TPAARPRAV_ REV__ENST00000586788.1_1_19:531880-536341:+|nuORF 18.1463463914782 0.3454829746528889 6 DVPTAAV 7 -1 65.209 0.0 0.0 6.9553 0.0 0.0 266.1998463361344 0.0 266.1998463361344 0.0 44.4198498018726 0.0 0.0 0 0.8494850021680094 0.0 0.9247425010840048 0.0 DVPTAAV 6.9553 - 898 1 1.798 179821.5 0.4900000095367431 3935 5885 9819 SUDHL4_400M_050219_2,9822 SUDHL4_400M_050219_2,9822,TPAARPRAV False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9823 56.162 800.0 130840.0 25 0 1999.2 -1 0 115 1178.8824993918229 0 1178.871874988079 PEAK CID FTMS 0 0 0 -1 0 4 6 {M(Oxidation (M))|F}ANQQA 6 -1 17.344 0.0 0.0 0.73625 0.0 0.0 1074.2197450774152 619.2127169244749 1693.43246200189 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}ANQQA 0.73625 - 219 + 1 1.798 63665.3 0.3899999856948852 3936 5885 9819 SUDHL4_400M_050219_2,9823 SUDHL4_400M_050219_2,9823, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9826 56.182 785.0 255430.0 25 0 39554.0 + 34436 SLWKEVSEL 9 147 545.7926075565593 1089.5706621799186 2 545.7930786013603 MULTI CID FTMS 0 0 0 9825 133490.453125 0.2408779829672651 -16 0.3317413330078125 1 Unmodified _SLWKEVSEL_ ENSG00000025156|ENST00000368455|HSF2;nc|ENSG00000025156|Q03933-2|HSF2 107.09958533191995 0.0072323465566536 6 {[TV]|[{I|L}S]}WGVTVSE{I|L} 10 3 + 108.07 0.0 0.0 9.919 9.919 88.918 0.0 0.0 0.0 20.79181246047625 49.180605203050135 20.79181246047625 3.564921830680703 0 1.5356668758921828 2.0 1.634250846992986 0.0 {[TV]|[{I|L}S]}WGVTVSE{I|L};{[TV]|[{I|L}S]}WGVS{I|L}SE{I|L};{[TV]|[{I|L}S]}WGVTSVE{I|L};{[TV]|[{I|L}S]}WGVTD{I|L}S{I|L};{[TV]|[{I|L}S]}WGVSTVE{I|L};{[TV]|[{I|L}S]}WGVTVES{I|L};{[TV]|[{I|L}S]}WGVSE{I|L}S{I|L};{[TV]|[{I|L}S]}WKEVSE{I|L};{[TV]|[{I|L}S]}WGVS{I|L}ES{I|L};{[TV]|[{I|L}S]}WKED{I|L}S{I|L} 9.919;9.5918;9.46;9.3857;9.1329;9.1094;9.0585;8.8816;8.7822;8.6468 -;-;-;-;-;-;-;+;-;- + 13507 1 1.798 150119.9 1.0 3937 5887 9825 SUDHL4_400M_050219_2,9826 SUDHL4_400M_050219_2,9826,SLWKEVSEL True True SLWKEVSEL 56.182221 545.79307860136 1699338.625 9825.0 nc|ENSG00000025156|Q03933-2|HSF2;;ENSG00000025156|ENST00000368455|HSF2 5.8958048820495605 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9829 56.202 785.0 172170.0 25 0 7680.5 -1 0 96 912.3346210383696 0 912.317919909954 PEAK CID FTMS 0 0 0 9828 41345.2578125 0.8264665478703372 5 -0.0566978454589843 1 6 {I|L}TVVSV 6 -1 48.325 0.0 0.0 2.6514 0.0 0.0 929.0973904148268 292.16721521549067 1221.2646056303176 0.0 0.0 0.0 0.0 0 0.0 0.0 1.8684151806525389 0.0 {I|L}TVVSV 2.6514 - 531 + 1 1.798 90671.4 1.0 3938 5889 9828 SUDHL4_400M_050219_2,9829 SUDHL4_400M_050219_2,9829, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9832 56.223 800.0 74753.0 25 0 4107.9 -1 0 117 866.2139160037041 0 866.2139160037041 PEAK CID FTMS 0 0 0 -1 0 1 6 S 1 -1 6.9897 0.0 0.0 0.40393 0.0 0.0 1508.3123096911986 132.04584680728752 1640.358156498486 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.40393 - 38 + 1 1.798 45968.4 0.4199999868869781 3939 5891 9831 SUDHL4_400M_050219_2,9832 SUDHL4_400M_050219_2,9832, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9835 56.243 800.0 145920.0 25 0 17067.0 + 29561 QLQDFDWQV 9 115 589.7776285639221 1177.540704194644 2 589.7776977419853 MULTI CID FTMS 0 0 0 9834 55215.65234375 0.0818646465180924 -10 0.1318855285644531 1 Unmodified _QLQDFDWQV_ ENSG00000169019|ENST00000381571|COMMD8 92.4914307365334 0.0139747738690111 6 [Q{I|L}]QD{M(Oxidation (M))|F}DW{[QV]|[N{I|L}]|[RA]|[KV]} 9 0 + 54.196 0.0 0.0 4.6025 4.6025 75.355 0.0 0.0 0.0 1.7512841890908248 5.642492736872597 1.7512841890908248 1.7512841890908248 0 0.0 1.0457574905606752 0.9247425010840048 2.0669015600442577 + + [Q{I|L}]QD{M(Oxidation (M))|F}DW{[QV]|[N{I|L}]|[RA]|[KV]};[AG]{I|L}QD{M(Oxidation (M))|F}DW{[QV]|[N{I|L}]|[RA]|[KV]};[Q{I|L}][AG]D{M(Oxidation (M))|F}DW{[QV]|[N{I|L}]|[RA]|[KV]};[Q{I|L}]QD{M(Oxidation (M))|F}D{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]};[AG]{I|L}QD{M(Oxidation (M))|F}D{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]};{[QV]|[N{I|L}]|[RA]|[KV]}AAD{M(Oxidation (M))|F}DW{[QV]|[N{I|L}]|[RA]|[KV]};[AG]D{M(Oxidation (M))|F}{I|L}QDW{[QV]|[N{I|L}]|[RA]|[KV]};[Q{I|L}][AG]D{M(Oxidation (M))|F}D{[DA]|[EG]}{[QV]|[N{I|L}]|[RA]|[KV]};[AG]D[Q{I|L}]{M(Oxidation (M))|F}DW{[QV]|[N{I|L}]|[RA]|[KV]};[AG]VAAD{M(Oxidation (M))|F}DW{[QV]|[N{I|L}]|[RA]|[KV]} 4.6025;4.4538;3.8205;3.8205;3.6755;3.2666;3.1478;3.0423;2.824;2.7732 +;-;-;-;-;-;-;-;-;- + 1925 1 1.798 90900.6 0.4000000059604645 3940 5893 9834 SUDHL4_400M_050219_2,9835 SUDHL4_400M_050219_2,9835,QLQDFDWQV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9840 56.272 800.0 33076.0 25 0 897.91 -1 0 69 1164.196459949017 0 1164.196459949017 PEAK CID FTMS 0 0 0 -1 0 1 6 N 1 -1 5.4846 0.0 0.0 0.23575 0.0 0.0 1181.8078846423716 1027.4894503229127 2209.2973349652843 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.23575 - 5 + 1 1.798 24066.5 0.2800000011920929 3941 5897 9839 SUDHL4_400M_050219_2,9840 SUDHL4_400M_050219_2,9840, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9841 56.285 800.0 118210.0 25 0 20822.0 + 40779 VLLESEQFL 9 104 539.2954885085932 1076.5764240839862 2 539.2949096560478 MULTI CID FTMS 0 0 0 9839 92274.921875 0.2686893394265905 -6 0.0488319396972656 2 Unmodified _VLLESEQFL_ ENSG00000140319|ENST00000267884|SRP14;ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF 50.855029805455786 0.0384952370514206 6 [{I|L}V]{I|L}ESEQ{M(Oxidation (M))|F}{I|L} 9 0 + 62.641 0.0 0.0 5.8186 5.8186 83.203 0.0 0.0 0.0 14.313637641589878 9.889917747712644 9.889917747712644 4.771212547196626 0 0.7742275032520141 2.0 0.9247425010840048 0.0 + + [{I|L}V]{I|L}ESEQ{M(Oxidation (M))|F}{I|L};[{I|L}V]E{I|L}SEQ{M(Oxidation (M))|F}{I|L};[{I|L}V]{I|L}ESQE{M(Oxidation (M))|F}{I|L};[{I|L}V]{I|L}TDEQ{M(Oxidation (M))|F}{I|L};[{I|L}V]{I|L}ESE[AG]{M(Oxidation (M))|F}{I|L};[{I|L}V]E{I|L}SQE{M(Oxidation (M))|F}{I|L};[{I|L}V]ES{I|L}EQ{M(Oxidation (M))|F}{I|L};[{I|L}V]E{I|L}SE[AG]{M(Oxidation (M))|F}{I|L};{[QN]|[E{I|L}]|[KN]}{I|L}VSEQ{M(Oxidation (M))|F}{I|L};[{I|L}V]{I|L}TDQE{M(Oxidation (M))|F}{I|L} 5.8186;5.3754;5.2593;5.0336;4.9633;4.8162;4.8137;4.5201;4.489;4.4744 +;-;-;-;-;-;-;-;-;- + 735 1 1.798 75509.7 0.3400000035762787 3942 5897 9839 SUDHL4_400M_050219_2,9841 SUDHL4_400M_050219_2,9841,VLLESEQFL True True VLLESEQFL 56.285431 539.294909656048 3150819.8125 9839.0 ENST00000558243.1_1_15:40330963-40331317:-|nuORF;;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;;ENSG00000140319|ENST00000267884|SRP14 4.445323546727498 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9846 56.314 800.0 24847.0 25 0 1093.1 -1 0 54 1193.300097644329 0 1193.300097644329 PEAK CID FTMS 0 0 0 -1 0 1 6 C(Carbamidomethyl (C)) 1 -1 5.4846 0.0 0.0 0.23 0.0 0.0 990.4229969470584 1231.0998018854127 2221.522798832471 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.23 - 3 + 1 1.798 24450.1 0.4000000059604645 3943 5901 9845 SUDHL4_400M_050219_2,9846 SUDHL4_400M_050219_2,9846, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9847 56.328 800.0 131050.0 25 0 2699.6 -1 0 130 1180.560473620892 0 1180.560473620892 PEAK CID FTMS 0 0 0 -1 0 2 6 VQ{I|L}EW 5 -1 23.192 0.0 0.0 0.98309 0.0 0.0 1197.5744326739075 503.1601087431167 1700.734541417024 0.0 0.0 0.0 0.0 0 0.0 0.0 0.7302046884880937 0.6549471895720985 VQ{I|L}EW 0.98309 - 1097 + 1 1.798 63565.8 0.4000000059604645 3944 5901 9845 SUDHL4_400M_050219_2,9847 SUDHL4_400M_050219_2,9847, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9850 56.347 800.0 72322.0 25 0 4395.2 + 20492 LLLDVPTAAV 10 99 506.3083483626477 0 506.3083679080009 PEAK CID FTMS 0 0 0 9849 137520.84375 0.9698787008901144 -1 0.0036582946777343 1 Unmodified _LLLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 26.88365393820708 0.2428278298207118 6 {I|L}{I|L} 2 8 10.573 0.0 0.0 1.0462 0.0 0.0 457.2535242626017 324.1569002740844 781.4104245366862 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 0.0 + {I|L}{I|L} 1.0462 + + 93 + 1 1.798 49567.7 0.550000011920929 3945 5903 9849 SUDHL4_400M_050219_2,9850 SUDHL4_400M_050219_2,9850,LLLDVPTAAV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9851 56.349 57.0 394170.0 25 0 9911.2 -1 0 70 916.151904284954 0 916.151904284954 PEAK CID FTMS 0 0 0 -1 0 2 6 S 1 -1 8.9794 0.0 0.0 0.4906 0.0 0.0 1518.146660277136 222.0885866754516 1740.2352469525877 0.0 0.0 0.0 0.0 0 0.0 0.0 0.5 0.0 S 0.4906 - 8 + 1 1.798 22535.5 1.0 3946 5903 9849 SUDHL4_400M_050219_2,9851 SUDHL4_400M_050219_2,9851, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9854 56.358 130.0 140790.0 25 0 13728.0 + 7229 EERLKAETL 9 43 544.803389430999 1087.592225928798 2 544.8030883669853 MULTI CID FTMS 0 0 0 9853 295607.625 0.7625544722417888 2 -0.0553436279296875 1 Unmodified _EERLKAETL_ REV__ENSG00000168286|ENST00000303596|THAP11 4.3292370932331545 0.7635526921153418 6 {I|L} 1 -1 13.979 0.0 0.0 1.2854 0.0 0.0 956.4970854032103 0.0 956.4970854032103 0.0 8.494850021680094 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 1.2854 + + 6 + 1 1.798 20849.8 1.0 3947 5905 9853 SUDHL4_400M_050219_2,9854 SUDHL4_400M_050219_2,9854,EERLKAETL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9855 56.372 800.0 63507.0 25 0 3729.7 + 31265 RLWEKLTLL 9 69 586.3636522923841 1170.7127516515682 2 586.3625976443291 MULTI CID FTMS 0 0 0 9853 58932.68359375 0.5939546708778114 1 -0.0256271362304687 2 Unmodified _RLWEKLTLL_ ENSG00000130921|ENST00000253233|MTRFR;ENST00000538888.5_1_12:123738221-123738578:+|nuORF;nc|ENSG00000130921|Q9H3J6-2|MTRFR 38.17557092003332 0.0854718145212029 6 [{I|L}T][WR][VG]{I|L}T{I|L}{I|L} 10 4 + 57.106 0.0 0.0 4.8779 4.8779 80.776 0.0 0.0 0.0 5.835682082013776 3.7751372576825295 3.7751372576825295 5.835682082013776 0 0.6643943297944485 2.0 1.6237125054200234 0.0 [{I|L}T][WR][VG]{I|L}T{I|L}{I|L};[R{I|L}][WE]K{I|L}T{I|L}{I|L};[{I|L}T][WR][VG]T{I|L}{I|L}{I|L};[{I|L}T][WR][K{I|L}]E{I|L}{I|L};[R{I|L}][WE]KT{I|L}{I|L}{I|L};[R{I|L}]{[WT]|[RM]}[VG]{I|L}T{I|L}{I|L};[R{I|L}]{[WT]|[RM]}[VG]T{I|L}{I|L}{I|L};[R{I|L}]{[WT]|[RM]}[K{I|L}]E{I|L}{I|L} 4.8779;4.3794;4.0008;3.5496;3.5023;2.871;1.9939;1.5427 -;+;-;-;-;-;-;- + 198 1 1.798 44191.1 0.7200000286102295 3948 5905 9853 SUDHL4_400M_050219_2,9855 SUDHL4_400M_050219_2,9855,RLWEKLTLL True True RLWEKLTLL 56.371893 586.362597644329 374740.71875 9853.0 nc|ENSG00000130921|Q9H3J6-2|MTRFR;;ENST00000538888.5_1_12:123738221-123738578:+|nuORF;;ENSG00000130921|ENST00000253233|MTRFR 4.971347808837891 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9856 56.378 365.0 150590.0 25 0 7473.4 -1 0 68 926.9334814463504 1851.8524099595008 2 927.4356567263604 MULTI CID FTMS 0 0 0 9853 118783.59375 0.6079966051393494 -8 0.0976676940917968 3 6 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}YEV 13 -1 72.225 0.0 0.0 3.9002 0.0 0.0 0.0 154.0777185821807 154.0777185821807 53.52877945773014 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F}YEV 3.9002 - 775 1 1.798 40842.0 1.0 3949 5905 9853 SUDHL4_400M_050219_2,9856 SUDHL4_400M_050219_2,9856, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9858 56.396 800.0 195950.0 25 0 7780.2 + -1 LLIGTDVSL 9 132 930.5497353969314 0 930.5510742068292 PEAK CID FTMS 0 0 0 9857 216270.84375 0.8829276743974503 -2 0.0300407409667968 1 nc|ENSG00000145041|Q9Y4B6-2|DCAF1;nc|ENSG00000145041|Q9Y4B6-3|DCAF1;ENSG00000145041|ENST00000684031|DCAF1 6 {I|L}S{I|L}{I|L}VD 6 -1 45.271 0.0 0.0 2.4351 0.0 0.0 947.5541483632062 268.1309908502563 1215.6851392134624 0.0 0.0 0.0 0.0 0 0.0 0.0 2.341129063296272 0.0 {I|L}S{I|L}{I|L}VD 2.4351 - 1779 + 1 1.798 102314.8 0.4000000059604645 3950 5906 9857 SUDHL4_400M_050219_2,9858 SUDHL4_400M_050219_2,9858, False False LLIGTDVSL 56.396209 930.551074206829 982017.625 9857.0 nc|ENSG00000145041|Q9Y4B6-2|DCAF1;;nc|ENSG00000145041|Q9Y4B6-3|DCAF1;;ENSG00000145041|ENST00000684031|DCAF1 5.025258700052897 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9859 56.408 689.0 66193.0 25 0 1336.6 -1 0 83 1007.311816394329 0 1007.311816394329 PEAK CID FTMS 0 0 0 -1 0 2 6 P 1 -1 3.4949 0.0 0.0 0.17365 0.0 0.0 823.5809559314329 1088.9273165338502 1912.508272465283 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.17365 - 4 + 1 1.798 32737.4 1.0 3951 5906 9857 SUDHL4_400M_050219_2,9859 SUDHL4_400M_050219_2,9859, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9866 56.445 800.0 88424.0 25 0 3402.4 + + 14556 YLGEFSITY 9 129 1092.5181062014117 1091.5108297348115 1 1092.525927722454 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _IHMEWLTY_ ENSG00000115268|ENST00000592588|RPS15;ENST00000586096.3_1_19:1440314-1440458:+|nuORF 30.22481116460888 0.4082965392918993 6 [Y{I|L}]SA{M(Oxidation (M))|F}D{I|L}TY 9 -1 + 62.793 0.0 0.0 5.7529 5.7529 83.859 0.0 0.0 0.0 13.1437180047066 14.973024840566469 13.1437180047066 5.994850021680094 0 0.3252574989159953 1.6989700043360187 1.7302046884880935 0.0 [Y{I|L}]SA{M(Oxidation (M))|F}D{I|L}TY;[Y{I|L}]SA{M(Oxidation (M))|F}S{I|L}EY;[Y{I|L}]S{M(Oxidation (M))|F}W{I|L}TY;{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}YS{I|L}TY;[Y{I|L}]{M(Oxidation (M))|F}WS{I|L}TY;[Y{I|L}]{[DA]|[EG]}{M(Oxidation (M))|F}S{I|L}TY;{[DA]|[EG]}{M(Oxidation (M))|F}{I|L}SY{I|L}TY;[Y{I|L}]{[DA]|[EG]}AY{I|L}TY;[Y{I|L}]S[W{I|L}]{M(Oxidation (M))|F}TY;[Y{I|L}]SA{NN|[MP]|[D{I|L}]|[EV]}{M(Oxidation (M))|F}TY 5.7529;5.2037;4.7907;4.5487;4.4992;4.4733;4.3806;4.3051;3.9476;3.8282 -;-;-;-;-;-;-;-;-;- 2543 1 1.798 47023.1 0.2800000011920929 3952 5912 9865 SUDHL4_400M_050219_2,9866 SUDHL4_400M_050219_2,9866,IHMEWLTY False False YLGEFSITY 56.444751 1092.52592772245 6311780.5 9865.0 ENSG00000115268|ENST00000592588|RPS15;;ENST00000586096.3_1_19:1440314-1440458:+|nuORF 5.673099199930827 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9869 56.461 537.0 57623.0 25 0 2279.1 -1 0 76 1181.632861316204 0 1181.632861316204 PEAK CID FTMS 0 0 0 -1 0 1 6 V 1 -1 3.0989 0.0 0.0 0.13124 0.0 0.0 1536.8102039783082 722.3291109674436 2259.139314945752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.13124 - 15 + 1 1.798 28511.7 1.0 3953 5914 9868 SUDHL4_400M_050219_2,9869 SUDHL4_400M_050219_2,9869, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9870 56.471 575.0 151970.0 25 0 8836.6 + 29563 QLQDFDWQV 9 117 1178.5461749946887 1177.5388985280888 1 1178.550585925579 MULTI CID FTMS 0 0 0 9868 128359.75 0.4091811718436359 10 -0.0964508056640625 2 Unmodified _QLQDFDWQV_ ENSG00000169019|ENST00000381571|COMMD8 157.7952019732125 0.0013334662702519 6 [Q{I|L}]QD{M(Oxidation (M))|F}DWQV 9 0 + 102.44 0.0 0.0 8.6992 8.6992 93.724 0.0 0.0 0.0 8.256886463274284 63.54811556341673 8.256886463274284 9.208187539523747 0 1.5994850021680094 0.0 1.841129063296272 3.1989700043360187 + + [Q{I|L}]QD{M(Oxidation (M))|F}DWQV;[Q{I|L}][AG]D{M(Oxidation (M))|F}DWQV;[Q{I|L}]QD{M(Oxidation (M))|F}DW[AG]V;[Q{I|L}][AG]D{M(Oxidation (M))|F}DW[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}AAD{M(Oxidation (M))|F}DWQV;{[QD]|[EN]|[WG]|[KD]|[RS]}[Q{I|L}]{M(Oxidation (M))|F}DWQV;{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}D{I|L}QWQV;{[QV]|[N{I|L}]|[RA]|[KV]}AAD{M(Oxidation (M))|F}DW[AG]V;{[QV]|[N{I|L}]|[RA]|[KV]}AAD{M(Oxidation (M))|F}D{[DA]|[EG]}QV;{NN|[MP]|[D{I|L}]|[EV]}QQ{M(Oxidation (M))|F}DWQV 8.6992;7.9172;7.9172;7.139;7.1353;6.7495;6.4289;6.357;6.357;6.2875 +;-;-;-;-;-;-;-;-;- + 5299 1 1.798 57164.8 1.0 3954 5914 9868 SUDHL4_400M_050219_2,9870 SUDHL4_400M_050219_2,9870,QLQDFDWQV True True QLQDFDWQV 56.470955 1178.55058592558 4282286.25 9868.0 ENSG00000169019|ENST00000381571|COMMD8 9.838337580362955 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9874 56.495 800.0 46318.0 25 0 1524.5 -1 0 74 964.5616409735655 0 964.6667968630792 PEAK CID FTMS 0 0 0 -1 0 1 6 QV 2 -1 4.6927 0.0 0.0 0.24351 0.0 0.0 1111.6929708125622 585.2687471979124 1696.961718010475 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 QV 0.24351 - 22 + 1 1.798 29535.9 0.6100000143051147 3955 5917 9873 SUDHL4_400M_050219_2,9874 SUDHL4_400M_050219_2,9874, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9875 56.509 800.0 80557.0 25 0 2946.3 -1 0 124 1031.163908849404 0 1031.163256824017 PEAK CID FTMS 0 0 0 9873 128880.1171875 1.0 0 0.0 2 6 {I|L}[PS]{I|L}Q{I|L}M 7 -1 18.933 0.0 0.0 0.91892 0.0 0.0 1047.7751921111142 227.06868921451408 1274.8438813256282 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.7742275032520141 {I|L}[PS]{I|L}Q{I|L}M 0.91892 - 955 + 1 1.798 47208.2 0.6499999761581421 3956 5917 9873 SUDHL4_400M_050219_2,9875 SUDHL4_400M_050219_2,9875, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9879 56.534 800.0 19292.0 25 0 2222.4 -1 0 39 997.4025186965132 0 997.7330200076104 PEAK CID FTMS 0 0 0 -1 0 1 6 {I|L} 1 -1 6.9897 0.0 0.0 0.35075 0.0 0.0 1272.4060372936135 604.2814974468077 1876.6875347404207 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.35075 - 4 + 1 1.798 18645.3 0.3300000131130218 3957 5920 9878 SUDHL4_400M_050219_2,9879 SUDHL4_400M_050219_2,9879, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9885 56.566 800.0 39206.0 25 0 4313.0 + 29562 QLQDFDWQV 9 63 589.7776285639221 1177.540704194644 2 589.7776367068291 MULTI CID FTMS 0 0 0 9884 20718.37890625 0.0307177891339365 22 -0.357666015625 1 Unmodified _QLQDFDWQV_ ENSG00000169019|ENST00000381571|COMMD8 26.88365393820708 0.1891292719743517 6 V 1 8 11.594 0.0 0.0 0.98458 0.0 0.0 1060.4610742281386 0.0 1060.4610742281386 0.0 3.232069545446961 0.0 0.0 0 0.0 0.0 0.0 0.0 + V 0.98458 + + 71 + 1 1.798 30903.2 0.6000000238418579 3958 5925 9884 SUDHL4_400M_050219_2,9885 SUDHL4_400M_050219_2,9885,QLQDFDWQV False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9886 56.572 312.0 70774.0 25 0 3269.6 -1 0 62 1078.5888148847837 0 1078.128222644329 PEAK CID FTMS 0 0 0 9884 85072.125 1.0 0 0.0 2 6 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.32432 0.0 0.0 1663.9601482248424 341.1112459772094 2005.071394202052 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.32432 - 25 + 1 1.798 22669.8 1.0 3959 5925 9884 SUDHL4_400M_050219_2,9886 SUDHL4_400M_050219_2,9886, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9889 56.587 482.0 104690.0 25 0 13504.0 + 13284 HIPDVITYL 9 78 535.7995020278667 1069.5844511225332 2 535.7980224490166 MULTI CID FTMS 0 0 0 9888 80306.1328125 0.8247759388327195 -16 0.1515235900878906 1 Unmodified _HIPDVITYL_ ENSG00000079459|ENST00000220584|FDFT1;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1 36.04419817259434 0.0971720506436186 6 [H{I|L}][DP]V{I|L}TY{I|L} 9 0 + 43.777 0.0 0.0 4.0929 4.0929 77.505 0.0 0.0 0.0 13.850745808631473 29.851453248366795 13.850745808631473 4.771212547196619 0 0.6435078169319297 1.5228787452803376 0.5 0.0 + + [H{I|L}][DP]V{I|L}TY{I|L};[H{I|L}][DP]VT{I|L}Y{I|L};[{I|L}P][DV]H{I|L}TY{I|L};[{I|L}P][HD]V{I|L}TY{I|L};[{I|L}P][DV]HT{I|L}Y{I|L};[{I|L}P][HD]VT{I|L}Y{I|L};{[VA]|[{I|L}G]}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}{I|L}TY{I|L};[{I|L}P][DV]TH{I|L}Y{I|L};{[VA]|[{I|L}G]}{I|L}{[YD]|[{M(Oxidation (M))|F}M]}T{I|L}Y{I|L};[{I|L}P]PSQ[RP]Y{I|L} 4.0929;3.6468;1.9416;1.9416;1.4955;1.4955;1.3234;1.0613;0.87731;0.65114 +;-;-;-;-;-;-;-;-;- + 270 1 1.798 46157.0 1.0 3960 5927 9888 SUDHL4_400M_050219_2,9889 SUDHL4_400M_050219_2,9889,HIPDVITYL True True HIPDVITYL 56.586877 535.798022449017 2578878.0 9888.0 nc|ENSG00000079459|P37268-4|FDFT1;;nc|ENSG00000079459|P37268-3|FDFT1;;nc|ENSG00000079459|P37268-5|FDFT1;;ENSG00000079459|ENST00000220584|FDFT1;;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;;nc|ENSG00000079459|P37268-2|FDFT1 5.070006529490153 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9890 56.601 800.0 146730.0 25 0 16484.0 -1 0 80 751.6987106604968 2252.07430258169 3 752.0338622927666 MULTI CID FTMS 0 0 0 9888 72191.7578125 0.414681898057635 -10 0.0968780517578125 2 6 A[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 8 -1 54.641 0.0 0.0 2.4263 0.0 0.0 1327.689044110928 0.0 1327.689044110928 0.0 37.65153777800478 0.0 0.0 0 0.5 0.0 0.8494850021680094 0.0 A[DP]DVD{M(Oxidation (M))|F}{M(Oxidation (M))|F} 2.4263 - 82 1 1.798 95155.5 0.3000000119209289 3961 5927 9888 SUDHL4_400M_050219_2,9890 SUDHL4_400M_050219_2,9890, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9896 56.628 515.0 40419.0 25 0 10514.0 -1 0 25 1127.537768542767 0 1127.537768542767 PEAK CID FTMS 0 0 0 -1 0 1 6 D 1 -1 6.9897 0.0 0.0 0.31023 0.0 0.0 527.2198703359926 1607.7847365606024 2135.004606896595 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.31023 - 1 + 1 1.798 23204.6 1.0 3962 5932 9895 SUDHL4_400M_050219_2,9896 SUDHL4_400M_050219_2,9896, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9897 56.642 800.0 115740.0 25 0 15208.0 + 43949 YGLPVVVKL 9 95 494.3158381370233 986.6171233408468 2 494.3152953982353 MULTI CID FTMS 0 0 0 9895 87030.3046875 1.0 0 0.0 2 Unmodified _YGLPVVVKL_ ENSG00000168036|ENST00000349496|CTNNB1 39.957323273325 0.0756908302845263 6 YG{I|L}PVVVK{I|L} 9 0 + 61.219 0.0 0.0 6.2049 6.2049 91.894 0.0 0.0 0.0 28.03092856645194 12.252684618815088 12.252684618815088 17.219127230825173 0 0.7429928190999391 1.3010299956639813 0.0 0.2396518287104437 + + YG{I|L}PVVVK{I|L};YG{I|L}PVV[K{I|L}]V 6.2049;4.4596 +;- + 190 + 1 1.798 75622.7 0.4199999868869781 3963 5932 9895 SUDHL4_400M_050219_2,9897 SUDHL4_400M_050219_2,9897,YGLPVVVKL True True YGLPVVVKL 56.642169 494.315295398235 422973.8125 9895.0 ENSG00000168036|ENST00000349496|CTNNB1 6.818484783172607 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9898 56.653 646.0 201460.0 25 0 19923.0 + 32471 SAIGPFSGL 9 122 848.4512608934782 847.4439844268782 1 848.4516479372978 MULTI CID FTMS 0 0 0 9895 170770.765625 0.9816676458496936 8 -0.1691818237304687 3 Unmodified _SAIGPFSGL_ ENSG00000111615|ENST00000229214|KRR1;ENST00000550023.5_1_12:75900038-75900188:-|nuORF;nc|ENSG00000111615|Q13601-2|KRR1 107.99703571036002 0.0067560930197464 6 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSG{I|L}TG{I|L} 9 6 + 78.968 0.0 0.0 9.3183 9.3183 83.787 0.0 0.0 0.0 13.979400086720377 14.09256854528806 13.979400086720377 0.0122623118827647 0 0.0 1.6989700043360187 1.6906140654642814 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSG{I|L}TG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}ASG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SGG{I|L}TG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SG{I|L}ASG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSA{I|L}SG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SGA{I|L}SG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GS{I|L}GTG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SG{I|L}GTG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}GSAVTG{I|L};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}SGAVTG{I|L} 9.3183;9.3169;9.3038;9.3024;9.094;9.0795;8.9631;8.9486;8.7402;8.7257 -;-;-;-;-;-;-;-;-;- 3031 1 1.798 86674.7 1.0 3964 5932 9895 SUDHL4_400M_050219_2,9898 SUDHL4_400M_050219_2,9898,SAIGPFSGL True True SAIGPFSGL 56.653452 848.451647937298 1673039.875 9895.0 ENSG00000111615|ENST00000229214|KRR1;;ENST00000550023.5_1_12:75900038-75900188:-|nuORF;;nc|ENSG00000111615|Q13601-2|KRR1 7.052610397338867 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9900 56.665 521.0 105170.0 25 0 5541.1 -1 0 101 926.9334814463504 1851.8524099595008 2 926.934619128704 MULTI CID FTMS 0 0 0 9899 43648.96875 0.1912269157147593 17 -0.2782020568847656 1 6 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F} 10 -1 40.221 0.0 0.0 2.1719 0.0 0.0 0.0 545.2772690146036 545.2772690146036 33.23123568026862 0.0 0.0 0.0 0 0.0 1.6989700043360187 0.0 0.0 [YQ]{M(Oxidation (M))|F}[YN]QQNA{M(Oxidation (M))|F} 2.1719 - 270 1 1.798 41455.2 1.0 3965 5933 9899 SUDHL4_400M_050219_2,9900 SUDHL4_400M_050219_2,9900, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9901 56.677 679.0 160280.0 25 0 19008.0 + 34202 SLPDIKVYL 9 93 524.3081740497302 1046.6017951662602 2 524.3080322146416 MULTI CID FTMS 0 0 0 9899 114662.296875 0.5248471779687383 -7 0.0817070007324218 2 Unmodified _SLPDIKVYL_ ENSG00000169220|ENST00000408923|RGS14;ENST00000425155.6_1_5:176795054-176799073:+|nuORF;ENST00000514713.5_1_5:176793951-176795930:+|nuORF;nc|ENSG00000169220|O43566-4|RGS14;nc|ENSG00000169220|O43566-5|RGS14;nc|ENSG00000169220|O43566-6|RGS14 29.081581746732265 0.1611639662936252 6 {[TV]|[{I|L}S]}PRVY 6 4 44.403 0.0 0.0 4.2426 0.0 0.0 0.0 328.18783290552955 328.18783290552955 22.97614693140829 0.0 0.0 0.0 0 0.9247425010840048 2.0 0.3807196863200844 0.0 {[TV]|[{I|L}S]}PRVY 4.2426 - 320 1 1.798 91861.0 1.0 3966 5933 9899 SUDHL4_400M_050219_2,9901 SUDHL4_400M_050219_2,9901,SLPDIKVYL False True SLPDIKVYL 56.67701 524.308032214642 1003040.4375 9899.0 nc|ENSG00000169220|O43566-6|RGS14;;nc|ENSG00000169220|O43566-5|RGS14;;ENST00000425155.6_1_5:176795054-176799073:+|nuORF;;ENST00000514713.5_1_5:176793951-176795930:+|nuORF;;nc|ENSG00000169220|O43566-4|RGS14;;ENSG00000169220|ENST00000408923|RGS14 4.184984048207601 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9904 56.697 800.0 50816.0 25 0 2870.7 -1 0 94 881.5385619997978 0 881.5385619997978 PEAK CID FTMS 0 0 0 -1 0 1 6 S 1 -1 3.9794 0.0 0.0 0.22597 0.0 0.0 1538.9621509997924 132.04573999576408 1671.0078909955564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.22597 - 3 + 1 1.798 34790.0 0.3300000131130218 3967 5935 9903 SUDHL4_400M_050219_2,9904 SUDHL4_400M_050219_2,9904, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9907 56.715 640.0 121330.0 25 0 75728.0 -1 0 49 584.2834138337497 583.2761373671497 1 584.2831909060478 MULTI CID FTMS 0 0 0 9906 106799.1796875 0.7978411596146306 1 -0.0413627624511718 1 6 T 1 -1 5.4846 0.0 0.0 0.9403 0.0 0.0 397.13895887769496 82.0669420831664 479.20590096086136 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.9403 - 10 + 1 1.798 62616.8 1.0 3968 5937 9906 SUDHL4_400M_050219_2,9907 SUDHL4_400M_050219_2,9907, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9908 56.728 800.0 102560.0 25 0 12777.0 + 44416 YMAELIERL 9 69 569.3021289171692 1136.5897049011382 2 569.3022338747978 MULTI CID FTMS 0 0 0 9906 106237.1484375 1.0 0 0.0 2 Unmodified _YMAELIERL_ ENSG00000112312|ENST00000230056|GMNN 33.4449034751529 0.1114409586740657 6 YMAE{I|L}{I|L}E[R{I|L}] 9 0 + 85.596 0.0 0.0 7.5309 7.5309 87.316 0.0 0.0 0.0 36.47817481888637 4.259687322722812 4.259687322722812 4.259687322722812 0 1.274227503252014 2.0 0.0 0.0 + + YMAE{I|L}{I|L}E[R{I|L}];YMAE{I|L}{I|L}{I|L}{[RE]|[WV]};YM{I|L}{[CP]|[EA]}{I|L}E[R{I|L}];YM{I|L}{[CP]|[EA]}{I|L}{I|L}{[RE]|[WV]};{[MS]|[{M(Oxidation (M))|F}A]}VV{I|L}{[CP]|[EA]}{I|L}[{M(Oxidation (M))|F}E] 7.5309;7.1561;5.4688;5.094;1.669 +;-;-;-;- + 123 + 1 1.798 68878.9 0.3799999952316284 3969 5937 9906 SUDHL4_400M_050219_2,9908 SUDHL4_400M_050219_2,9908,YMAELIERL True True YMAELIERL 56.728364 569.302233874798 557467.8125 9906.0 ENSG00000112312|ENST00000230056|GMNN 5.3924055099487305 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9909 56.742 800.0 57358.0 25 0 4805.5 + 17175 KLIQLQFEV 9 76 559.3348908804758 1116.6552288277514 2 559.3341552615166 MULTI CID FTMS 0 0 0 9906 103052.140625 1.0 0 0.0 3 Unmodified _KLIQLQFEV_ ENST00000393179.8_1_12:89885842-89919131:-|nuORF 68.08070601005525 0.0218408846571049 6 [Q{I|L}]{I|L}K{I|L}Q{M(Oxidation (M))|F}EV 9 2 + 69.954 0.0 0.0 6.2646 6.2646 88.424 0.0 0.0 0.0 5.290456128171996 54.46907869526544 5.290456128171996 9.208187539523742 0 0.5774509799928715 0.0 0.0 2.0356668758921828 [Q{I|L}]{I|L}K{I|L}Q{M(Oxidation (M))|F}EV;[Q{I|L}]{I|L}K{I|L}[AG]{M(Oxidation (M))|F}EV 6.2646;5.4399 -;- 120 1 1.798 39455.3 0.8100000023841858 3970 5937 9906 SUDHL4_400M_050219_2,9909 SUDHL4_400M_050219_2,9909,KLIQLQFEV True True KLIQLQFEV 56.742197 559.334155261517 355373.625 9906.0 ENST00000393179.8_1_12:89885842-89919131:-|nuORF 5.723104000091553 2.0 True 9.0 False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 9911 56.756 628.0 154750.0 25 0 11007.0 + 29516 QLLKCQLQL 9 133 572.3335822684206 0 572.3338500857353 PEAK CID FTMS 0 0 0 9910 123268.6796875 0.1507106377792347 -3 0.0612869262695312 1 Carbamidomethyl (C) _QLLKC(Carbamidomethyl (C))QLQL_ ENSG00000041880|ENST00000398755|PARP3;nc|ENSG00000041880|Q9Y6F1-2|PARP3 64.23631603340823 0.0129441640563295 6 {I|L}EW{I|L}EQ 6 7 27.841 0.0 0.0 2.4365 0.0 0.0 259.1713507945619 82.0669191949828 341.2382699895447 0.0 0.0 0.0 0.0 0 0.0 0.0 0.6549471895720985 0.6861818737241735 {I|L}EW{I|L}EQ 2.4365 - 657 + 1 1.798 76072.8 1.0 3971 5938 9910 SUDHL4_400M_050219_2,9911 SUDHL4_400M_050219_2,9911,QLLKCQLQL True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9912 56.768 704.0 220920.0 25 0 44575.0 + 20491 LLLDVPTAAV 10 119 1011.6080618859628 1010.6007854193626 1 1011.609301745892 MULTI CID FTMS 0 0 0 9910 125506.96875 0.0072366022325782 62 -0.665008544921875 2 Unmodified _LLLDVPTAAV_ ENSG00000216490|ENST00000407280|IFI30 123.45060196383646 0.0002228281112883 6 {I|L}{I|L}{I|L}DVTPAAV 10 2 + 80.855 0.0 0.0 8.0007 8.0007 83.727 0.0 0.0 0.0 4.194254253157453 16.53212513775344 4.194254253157453 1.020599913279625 0 2.305462187404089 1.3979400086720375 1.124803706770636 0.0 {I|L}{I|L}{I|L}DVTPAAV;{I|L}{I|L}D{I|L}VTPAAV;{I|L}{I|L}{I|L}DVPTAAV;[TP]A{I|L}{I|L}{I|L}DVAV;{I|L}{I|L}D{I|L}VPTAAV;{I|L}{I|L}VEVTPAAV;{I|L}{I|L}DV{I|L}TPAAV;{I|L}{I|L}VEVPTAAV;{I|L}{I|L}DV{I|L}PTAAV;{I|L}{I|L}VD{I|L}TPAAV 8.0007;7.8997;7.6366;7.5857;7.5356;7.465;7.4601;7.1009;7.096;7.0254 -;-;+;-;-;-;-;-;-;- + 3504 1 1.798 104057.8 1.0 3972 5938 9910 SUDHL4_400M_050219_2,9912 SUDHL4_400M_050219_2,9912,LLLDVPTAAV True True LLLDVPTAAV 56.767963 1011.60930174589 137832815.0 9910.0 ENSG00000216490|ENST00000407280|IFI30 6.565273284912109 1.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9913 56.782 800.0 45779.0 25 0 915.73 -1 0 88 1182.835986316204 0 1182.835986316204 PEAK CID FTMS 0 0 0 -1 0 3 6 P 1 -1 3.9794 0.0 0.0 0.16836 0.0 0.0 1406.821129271277 856.7490938775999 2263.5702231488767 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.16836 - 5 + 1 1.798 31354.3 0.4000000059604645 3973 5938 9910 SUDHL4_400M_050219_2,9913 SUDHL4_400M_050219_2,9913, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9916 56.793 250.0 249430.0 25 0 60082.0 + 37788 TLSERLWGL 9 69 537.801161402967 1073.5877698727338 2 537.8009521365166 MULTI CID FTMS 0 0 0 9915 237301.546875 0.6670121780577823 -1 0.0040626525878906 1 Unmodified _TLSERLWGL_ ENSG00000100216|ENST00000216034|TOMM22;ENST00000416399.2_1_10:120403290-120403707:+|nuORF;ENST00000492561.1_1_22:39078186-39079843:+|nuORF;ENST00000498134.1_1_13:33528197-33528527:-|nuORF 40.23920728925047 0.0741434193262949 6 [{I|L}T]SER{I|L}WG{I|L} 9 0 [{I|L}T] + + 40.354 23.724 11.079 3.7588 3.7588 53.415 0.0 0.0 0.0 0.0 31.502604262743148 0.0 0.0 0 2.242992819099939 0.0 0.0 0.0 + + [{I|L}T]SER{I|L}WG{I|L} 3.7588 + + 66 + 1 1.839 50920.3 1.0 3974 5940 9915 SUDHL4_400M_050219_2,9916 SUDHL4_400M_050219_2,9916,TLSERLWGL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9917 56.805 666.0 322540.0 25 0 167800.0 + 20628 LLPPPPLLA 9 89 930.6020521357405 929.5947756691404 1 930.598681628704 MULTI CID FTMS 0 0 0 9915 173851.9375 0.8770657784908605 1 -0.0436935424804687 2 Unmodified _LLPPPPLLA_ ENSG00000148219|ENST00000313400|ASTN2;nc|ENSG00000148219|O75129-2|ASTN2;nc|ENSG00000148219|O75129-3|ASTN2 45.7499826716795 0.0496882803020414 6 PPP{I|L}{I|L}A 6 3 39.105 0.0 0.0 4.2067 0.0 0.0 323.2208729474625 0.0 323.2208729474625 0.0 27.985775332874283 0.0 0.0 0 1.0 0.0 0.0 0.0 + PPP{I|L}{I|L}A 4.2067 + + 90 1 1.839 139902.8 1.0 3975 5940 9915 SUDHL4_400M_050219_2,9917 SUDHL4_400M_050219_2,9917,LLPPPPLLA True True LLPPPPLLA 56.804701 930.598681628704 1426312.75 9915.0 nc|ENSG00000148219|O75129-2|ASTN2;;nc|ENSG00000148219|O75129-3|ASTN2;;ENSG00000148219|ENST00000313400|ASTN2 6.482021490732829 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9918 56.818 754.0 149680.0 25 0 19635.0 + 9535 FLFPRSIDV 9 87 547.3062721084937 1092.5979912837872 2 547.3057128787041 MULTI CID FTMS 0 0 0 9915 103888.2265625 0.8534772104835197 -1 0.0040626525878906 3 Unmodified _FLFPRSIDV_ ENSG00000106460|ENST00000396668|TMEM106B;ENST00000420833.5_1_7:12258097-12270062:+|nuORF 47.594388314883695 0.0456443387682827 6 V{M(Oxidation (M))|F}{I|L}E 4 7 33.175 0.0 0.0 3.0364 0.0 0.0 586.3094349591812 0.0 586.3094349591812 0.0 3.366137399385053 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 V{M(Oxidation (M))|F}{I|L}E 3.0364 - 336 1 1.839 91408.7 1.0 3976 5940 9915 SUDHL4_400M_050219_2,9918 SUDHL4_400M_050219_2,9918,FLFPRSIDV True True FLFPRSIDV 56.817772 547.305712878704 678301.3125 9915.0 ENSG00000106460|ENST00000396668|TMEM106B;;ENST00000420833.5_1_7:12258097-12270062:+|nuORF 5.339191595713298 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9919 56.83 678.0 477240.0 25 0 141640.0 + 20445 LLIPGLATA 9 138 868.5500843919831 867.542807925383 1 868.5504638552666 MULTI CID FTMS 0 0 0 9915 194269.421875 0.1686845510492725 -7 0.1324386596679687 4 Unmodified _LLIPGLATA_ ENSG00000125356|ENST00000371437|NDUFA1 137.58523961978855 0.0182870798016747 6 [PG]{I|L}AT{I|L}{I|L}{I|L}A 9 6 + 64.464 0.0 0.0 7.4307 7.4307 84.305 0.0 0.0 0.0 1.8771089111986967 8.042905499428429 1.8771089111986967 1.8771089111986967 0 0.0 0.8239087409443188 1.416386562212267 0.0 [PG]{I|L}AT{I|L}{I|L}{I|L}A;{I|L}{I|L}{I|L}PG{I|L}ATA;{I|L}{I|L}{I|L}PGA{I|L}TA;{I|L}{I|L}{I|L}PGAT{I|L}A;[PG]A{I|L}T{I|L}{I|L}{I|L}A;{I|L}{I|L}{I|L}PQ{I|L}TA;{I|L}{I|L}{I|L}PQT{I|L}A;[PG]{I|L}A{I|L}{I|L}{I|L}TA;{I|L}{I|L}PG{I|L}{I|L}ATA;[PG]{I|L}{I|L}{I|L}{I|L}ATA 7.4307;7.2143;7.152;7.0636;6.7367;6.679;6.5906;6.584;6.5776;6.5167 -;+;-;-;-;-;-;-;-;- + 1925 1 1.839 213917.2 1.0 3977 5940 9915 SUDHL4_400M_050219_2,9919 SUDHL4_400M_050219_2,9919,LLIPGLATA True True LLIPGLATA 56.829586 868.550463855267 43391072.0 9915.0 ENSG00000125356|ENST00000371437|NDUFA1 6.753848393758138 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9921 56.846 800.0 51009.0 25 0 1225.0 -1 0 84 1131.692797839642 0 1131.692797839642 PEAK CID FTMS 0 0 0 -1 0 1 6 M 1 -1 6.9897 0.0 0.0 0.30909 0.0 0.0 999.7442860095592 1127.5525606744752 2127.2968466840343 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.30909 - 4 + 1 1.839 34389.1 0.4099999964237213 3978 5941 9920 SUDHL4_400M_050219_2,9921 SUDHL4_400M_050219_2,9921, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9922 56.851 258.0 61771.0 25 0 7329.8 20432 LLIENVASL 9 43 486.2926218664333 970.5706907996664 2 486.2921935915947 MULTI CID FTMS 0 0 0 9920 244769.515625 0.2265303403248658 -10 0.2167510986328125 2 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 8.593279151180031 0.6146971463335029 6 S{I|L} 2 7 17.959 0.0 0.0 1.8503 0.0 0.0 752.444040874665 0.0 752.444040874665 0.0 10.969100130080562 0.0 0.0 0 0.0 0.0 0.0 0.0 + S{I|L} 1.8503 + + 7 + 1 1.839 21318.6 1.0 3979 5941 9920 SUDHL4_400M_050219_2,9922 SUDHL4_400M_050219_2,9922,LLIENVASL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9923 56.865 800.0 124580.0 25 0 4840.2 -1 0 121 916.7750704576632 2747.30338197319 3 917.1113159060478 MULTI CID FTMS 0 0 0 9920 90277.78125 1.0 0 0.0 3 6 [H{I|L}]VEA{I|L}Y 7 -1 45.194 0.0 0.0 1.645 0.0 0.0 0.0 1918.84730222149 1918.84730222149 33.64007808576609 0.0 0.0 0.0 0 0.5 1.5228787452803376 0.0 0.0 [H{I|L}]VEA{I|L}Y 1.645 - 222 1 1.839 72087.6 0.3700000047683716 3980 5941 9920 SUDHL4_400M_050219_2,9923 SUDHL4_400M_050219_2,9923, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9926 56.885 800.0 36550.0 25 0 1759.6 -1 0 72 1083.699999988079 0 1083.699999988079 PEAK CID FTMS 0 0 0 -1 0 1 6 A 1 -1 3.0989 0.0 0.0 0.14311 0.0 0.0 1068.1883778064332 1023.15778528385 2091.3461630902834 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.14311 - 3 + 1 1.839 26308.7 0.4199999868869781 3981 5943 9925 SUDHL4_400M_050219_2,9926 SUDHL4_400M_050219_2,9926, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9927 56.895 571.0 274010.0 25 0 167180.0 + -1 INRCSLRR 8 56 1074.5936842997928 1073.5864078331929 1 1074.591967761517 MULTI CID FTMS 0 0 0 9925 107301.2265625 0.7480037974875193 1 -0.02606201171875 2 Carbamidomethyl (C) _INRC(Carbamidomethyl (C))SLRR_ REV__ENST00000509355.5_1_5:59284313-59481425:-|nuORF;REV__ENST00000509368.6_1_5:59284313-59481385:-|nuORF;REV__ENST00000512069.6_1_5:58854610-59284490:-|nuORF;REV__nc|ENSG00000113448|Q08499-11|PDE4D 4.3292370932331545 0.7980541185046766 6 S 1 -1 3.9794 0.0 0.0 0.37066 0.0 0.0 120.11986838182412 863.3914278619749 983.511296243799 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.37066 + + 2 + 1 1.839 105244.9 1.0 3982 5943 9925 SUDHL4_400M_050219_2,9927 SUDHL4_400M_050219_2,9927,INRCSLRR False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9933 56.928 800.0 74452.0 25 0 7008.5 -1 0 100 1148.487597644329 0 1148.487597644329 PEAK CID FTMS 0 0 0 -1 0 1 6 Q 1 -1 6.9897 0.0 0.0 0.30457 0.0 0.0 1278.4559559314332 885.4163302057249 2163.872286137158 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.30457 - 9 + 1 1.839 38722.9 0.2399999946355819 3983 5948 9932 SUDHL4_400M_050219_2,9933 SUDHL4_400M_050219_2,9933, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9938 56.95 348.0 218150.0 25 0 28559.0 + 18300 KVLDFEHFL 9 89 574.3112499790204 1146.6079470248408 2 574.3112060427666 MULTI CID FTMS 0 0 0 9937 99378.1640625 0.2712910406341797 -6 0.0362167358398437 1 Unmodified _KVLDFEHFL_ ENSG00000092841|ENST00000550697|MYL6;ENST00000548725.5_1_12:56552185-56553955:+|nuORF;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;nc|ENSG00000092841|P60660-2|MYL6 69.33821966488729 0.021354776001734 6 KV{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L} 9 0 + 91.199 0.0 0.0 7.9538 7.9538 96.435 0.0 0.0 0.0 51.64274788074436 9.665762445130497 9.665762445130497 21.80400924012389 0 2.5356668758921828 1.2218487496163564 0.8252574989159953 0.0 + + KV{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};K{I|L}VD{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}{I|L}D{M(Oxidation (M))|F}EH{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}ED{I|L}VK{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}D{I|L}VK{M(Oxidation (M))|F}{I|L};{[{M(Oxidation (M))|F}H]|[RQ]}ES{I|L}V[VG]{M(Oxidation (M))|F}{I|L};{[YC]|[HE]}{M(Oxidation (M))|F}S{I|L}V[VG]{M(Oxidation (M))|F}{I|L} 7.9538;6.0522;3.2871;3.2027;2.9401;1.1958;0.93331 +;-;+;-;-;-;- + 391 + 1 1.839 59441.9 1.0 3984 5952 9937 SUDHL4_400M_050219_2,9938 SUDHL4_400M_050219_2,9938,KVLDFEHFL True True KVLDFEHFL 56.949623 574.311206042767 1607356.25 9937.0 ENST00000548725.5_1_12:56552185-56553955:+|nuORF;;ENSG00000092841|ENST00000550697|MYL6;;MYL6|p.N136Mfs*10|1|0.17|ENSG00000092841|chr12:56160299-56160299|A/-|frameshift_variant;;nc|ENSG00000092841|P60660-2|MYL6 8.060919920603434 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9939 56.96 579.0 25214.0 25 0 2944.6 -1 0 41 881.4097167849541 0 881.4097167849541 PEAK CID FTMS 0 0 0 -1 0 2 6 P 1 -1 5.4846 0.0 0.0 0.31148 0.0 0.0 1238.537498900183 422.20420252017817 1660.741701420361 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.31148 - 3 + 1 1.839 16677.3 1.0 3985 5952 9937 SUDHL4_400M_050219_2,9939 SUDHL4_400M_050219_2,9939, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9940 56.967 427.0 18187.0 25 0 2319.8 -1 0 18 1131.023242175579 0 1131.023242175579 PEAK CID FTMS 0 0 0 -1 0 3 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.839 14120.9 1.0 3986 5952 9937 SUDHL4_400M_050219_2,9940 SUDHL4_400M_050219_2,9940, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9941 56.972 228.0 55271.0 25 0 3816.7 -1 0 35 851.4871768490625 0 851.8280517458916 PEAK CID FTMS 0 0 0 9937 33511.67578125 1.0 0 0.0 4 6 R 1 -1 5.4846 0.0 0.0 0.32244 0.0 0.0 1211.734472251056 330.1117342584594 1541.8462065095157 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.32244 - 1 + 1 1.839 17182.3 1.0 3987 5952 9937 SUDHL4_400M_050219_2,9941 SUDHL4_400M_050219_2,9941, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9944 56.992 800.0 119800.0 25 0 29396.0 -1 0 70 877.0139465403017 1752.0133401474034 2 877.0139037966728 MULTI CID FTMS 0 0 0 9943 64303.47265625 0.8085384392094033 1 -0.016387939453125 1 6 NQWV 4 -1 21.67 0.0 0.0 1.2369 0.0 0.0 627.3894255353235 594.3250826471311 1221.714508182455 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 NQWV 1.2369 - 68 + 1 1.839 69399.7 0.3300000131130218 3988 5954 9943 SUDHL4_400M_050219_2,9944 SUDHL4_400M_050219_2,9944, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9947 57.001 36.0 1297500.0 25 0 88754.0 + 29462 QLIDKVWQL 9 88 571.8324034536828 1141.6502539741657 2 571.8321411013603 MULTI CID FTMS 0 0 0 9946 1321949.625 0.5589778455361043 5 -0.0860481262207031 1 Unmodified _QLIDKVWQL_ ENSG00000129657|ENST00000436233|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF;nc|ENSG00000129657|Q92503-2|SEC14L1;nc|ENSG00000129657|Q92503-3|SEC14L1 52.268347100219714 0.0353964759249114 6 [Q{I|L}]{I|L}[HK]AD{I|L} 8 4 42.427 0.0 0.0 3.7163 0.0 0.0 0.0 220.11017786197505 220.11017786197505 21.331721486966373 0.0 0.0 0.0 0 0.4247425010840047 2.0 0.3807196863200844 0.3252574989159953 [Q{I|L}]{I|L}[HK]AD{I|L} 3.7163 - 444 + 1 1.839 41288.2 1.0 3989 5956 9946 SUDHL4_400M_050219_2,9947 SUDHL4_400M_050219_2,9947,QLIDKVWQL True True QLIDKVWQL 57.001049 571.83214110136 16957164.0 9946.0 nc|ENSG00000129657|Q92503-3|SEC14L1;;nc|ENSG00000129657|Q92503-2|SEC14L1;;ENSG00000129657|ENST00000436233|SEC14L1;;ENST00000587491.5_1_17:75207779-75210102:+|nuORF 4.6559423605601 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9948 57.014 748.0 51658.0 25 0 9500.7 + 20495 LLLEPSPQP 9 66 497.2831139728238 0 497.2830688357353 PEAK CID FTMS 0 0 0 9946 110635.8046875 1.0 0 0.0 2 Unmodified _LLLEPSPQP_ REV__ENSG00000198218|ENST00000395443|QRICH1;REV__ENST00000479449.1_1_3:49070551-49094468:-|nuORF 17.11289562659939 0.230679707888486 6 {I|L}{I|L}E 3 -1 22.747 0.0 0.0 2.2918 0.0 0.0 113.08617315873512 521.2351778619749 634.32135102071 0.0 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3807196863200844 0.0 {I|L}{I|L}E 2.2918 + + 13 + 1 1.839 34900.0 1.0 3990 5956 9946 SUDHL4_400M_050219_2,9948 SUDHL4_400M_050219_2,9948,LLLEPSPQP False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9949 57.028 800.0 17565.0 25 0 4446.7 -1 0 16 1190.438037097454 0 1190.438037097454 PEAK CID FTMS 0 0 0 -1 0 3 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 1.839 17166.5 0.3799999952316284 3991 5956 9946 SUDHL4_400M_050219_2,9949 SUDHL4_400M_050219_2,9949, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9950 57.042 800.0 219950.0 25 0 18399.0 + 33113 SESPIVVVL 9 107 942.550660465464 941.543383998864 1 942.5521118044852 MULTI CID FTMS 0 0 0 9946 94830.8046875 0.3140489981245559 -19 0.2954292297363281 4 Unmodified _SESPIVVVL_ ENSG00000140612|ENST00000268220|SEC11A;ENSG00000166562|ENST00000587834|SEC11C;ENST00000585864.1_1_18:56807180-56819918:+|nuORF;nc|ENSG00000140612|P67812-2|SEC11A;nc|ENSG00000140612|P67812-3|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A 92.8221339359638 0.0138398038803217 6 [{I|L}P]VSESVV{I|L} 9 6 + 85.085 0.0 0.0 9.0368 9.0368 84.106 0.0 0.0 0.0 13.42350884742548 11.237125054200234 11.237125054200234 0.5102999566398125 0 0.4247425010840047 1.5228787452803376 1.798455006504028 0.0 [{I|L}P]VSESVV{I|L};[{I|L}P]SVESVV{I|L};[{I|L}P]S{[ES]|[DT]|[{I|L}C]}VVV{I|L};[{I|L}P]VVSESV{I|L};[{I|L}P]VSVESV{I|L};[{I|L}P]SVVESV{I|L};[{I|L}P]VSEVSV{I|L};[{I|L}P]SVEVSV{I|L};[{I|L}P]VSESV{I|L}V;[{I|L}P]SVESV{I|L}V 9.0368;8.9826;8.494;8.381;8.3526;8.2984;7.9042;7.85;7.8433;7.7891 -;-;-;-;-;-;-;-;-;- 2106 1 1.839 117227.7 0.3600000143051147 3992 5956 9946 SUDHL4_400M_050219_2,9950 SUDHL4_400M_050219_2,9950,SESPIVVVL True True SESPIVVVL 57.042078 942.552111804485 2135854.75 9946.0 ENSG00000140612|ENST00000268220|SEC11A;;nc|ENSG00000140612|P67812-3|SEC11A;;nc|ENSG00000140612|P67812-4|SEC11A;;ENSG00000166562|ENST00000587834|SEC11C;;nc|ENSG00000140612|P67812-2|SEC11A;;ENST00000585864.1_1_18:56807180-56819918:+|nuORF 8.943366368611654 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9953 57.06 669.0 146340.0 25 0 35444.0 + 37789 TLSERLWGL 9 85 537.8011700736993 1073.5877872141984 2 537.8008300662041 MULTI CID FTMS 0 0 0 9952 128985.484375 0.2750801091033972 7 -0.0685005187988281 1 Unmodified _TLSERLWGL_ ENSG00000100216|ENST00000216034|TOMM22;ENST00000416399.2_1_10:120403290-120403707:+|nuORF;ENST00000492561.1_1_22:39078186-39079843:+|nuORF;ENST00000498134.1_1_13:33528197-33528527:-|nuORF 59.36838082759317 0.0264317782606298 6 T{I|L}SER{I|L}WG{I|L} 9 0 + 85.232 0.0 0.0 7.939 7.939 95.471 0.0 0.0 0.0 58.91055354555377 13.46787486224656 13.46787486224656 15.21144069483583 0 2.0924778212679485 2.0 0.3494850021680094 0.0 + + T{I|L}SER{I|L}WG{I|L};T{I|L}{I|L}{M(Oxidation (M))|F}[KP]WG{I|L};[{I|L}T][RD]T{I|L}WG{I|L};{[VA]|[{I|L}G]}MA{I|L}T{I|L}WG{I|L};[{I|L}T][RD]W[{I|L}T]G{I|L};[W{I|L}][VS]T{I|L}WG{I|L};[W{I|L}]MR{I|L}WG{I|L};[{I|L}T][RD]WG[{I|L}T]{I|L};{[VA]|[{I|L}G]}MA{I|L}W[{I|L}T]G{I|L};{[VA]|[{I|L}G]}MA{I|L}WG[{I|L}T]{I|L} 7.939;6.5221;6.4199;4.7595;4.1096;3.9059;3.829;3.5447;2.4492;1.8843 +;-;-;-;-;-;-;-;-;- + 412 + 1 1.839 80642.5 1.0 3993 5958 9952 SUDHL4_400M_050219_2,9953 SUDHL4_400M_050219_2,9953,TLSERLWGL True True TLSERLWGL 57.060326 537.800830066204 4374381.0 9952.0 ENSG00000100216|ENST00000216034|TOMM22;;ENST00000416399.2_1_10:120403290-120403707:+|nuORF;;ENST00000498134.1_1_13:33528197-33528527:-|nuORF;;ENST00000492561.1_1_22:39078186-39079843:+|nuORF 6.929682572682698 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9954 57.074 800.0 70968.0 25 0 2187.4 -1 0 78 1081.529289922836 3241.566040368708 3 1081.862231433392 MULTI CID FTMS 0 0 0 9952 86661.90625 0.2944900504327755 -20 0.3039436340332031 2 6 DH{[DS]|[MA]|[CV]|TT}MV{[QV]|[N{I|L}]|[RA]|[KV]} 8 -1 36.643 0.0 0.0 1.1304 0.0 0.0 2312.1181643348214 0.0 2312.1181643348214 0.0 23.571231544599485 0.0 0.0 0 1.0 0.0 0.4247425010840047 0.0 DH{[DS]|[MA]|[CV]|TT}MV{[QV]|[N{I|L}]|[RA]|[KV]} 1.1304 - 78 1 1.839 44435.6 0.3799999952316284 3994 5958 9952 SUDHL4_400M_050219_2,9954 SUDHL4_400M_050219_2,9954, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9959 57.092 142.0 625020.0 25 0 111850.0 + 27218 PGLATALLL 9 70 868.5501972691854 867.5429208025854 1 870.5563232302666 MULTI CID FTMS 0 0 0 9958 495842.25 0.92582414761137 2 -0.009307861328125 1 Unmodified _PGLATALLL_ REV__ENSG00000099994|ENST00000358321|SUSD2 18.13498045792455 0.3457906370836843 6 ST{I|L} 3 -1 24.609 0.0 0.0 2.8367 0.0 0.0 0.0 563.3477877252561 563.3477877252561 7.174165578762484 0.0 0.0 0.0 0 0.0 0.0 0.3807196863200844 0.0 ST{I|L} 2.8367 - 229 + 1 1.839 65411.9 1.0 3995 5962 9958 SUDHL4_400M_050219_2,9959 SUDHL4_400M_050219_2,9959,PGLATALLL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9962 57.101 135.0 324620.0 25 0 49543.0 + 20433 LLIENVASL 9 61 486.2926218664333 970.5706907996664 2 486.2921935915947 MULTI CID FTMS 0 0 0 9961 476700.875 0.4411791687832299 13 -0.1018447875976562 1 Unmodified _LLIENVASL_ ENSG00000233276|ENST00000419783|GPX1;ENST00000388829.3_1_X:13397321-13397372:-|nuORF;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1 39.957323273325 0.0756908302845263 6 {[QN]|[E{I|L}]|[KN]}NV{I|L}{I|L} 6 4 32.681 0.0 0.0 3.3672 0.0 0.0 0.0 286.14048995421655 286.14048995421655 5.884166385481265 0.0 0.0 0.0 0 0.2887254899964357 0.958607314841775 0.0 0.3252574989159953 {[QN]|[E{I|L}]|[KN]}NV{I|L}{I|L} 3.3672 - 406 1 1.839 40105.7 1.0 3996 5964 9961 SUDHL4_400M_050219_2,9962 SUDHL4_400M_050219_2,9962,LLIENVASL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9963 57.115 800.0 98298.0 25 0 7734.5 + 29526 QLLSAIIEA 9 86 957.560353876981 956.553077410381 1 957.5618163943292 MULTI CID FTMS 0 0 0 9961 95137.453125 0.9171308707596156 3 -0.027099609375 2 Unmodified _QLLSAIIEA_ ENSG00000143603|ENST00000271915|KCNN3;ENST00000515643.1_1_1:154680226-154680694:-|nuORF;nc|ENSG00000143603|Q9UGI6-2|KCNN3;nc|ENSG00000143603|Q9UGI6-3|KCNN3 107.1870275148908 0.0071859432680538 6 [Q{I|L}]{I|L}SA{I|L}{I|L}EA 9 0 + 103.39 0.0 0.0 10.808 10.808 95.411 0.0 0.0 0.0 20.0 16.478174818886373 16.478174818886373 9.260912590556812 0 0.3252574989159953 1.154901959985743 1.9802046884880933 1.7179001828205482 + + [Q{I|L}]{I|L}SA{I|L}{I|L}EA;[Q{I|L}]{I|L}SA{I|L}E{I|L}A;{I|L}{I|L}QSA{I|L}{I|L}EA;[Q{I|L}]{[SA]|[TG]}{I|L}{I|L}{I|L}EA;{I|L}{I|L}QSA{I|L}E{I|L}A;[Q{I|L}]{[SA]|[TG]}{I|L}{I|L}E{I|L}A;{I|L}{I|L}TNA{I|L}{I|L}EA;{I|L}{I|L}TGQ{I|L}{I|L}EA;{[QV]|[N{I|L}]|[RA]|[KV]}[{I|L}T]A{I|L}{I|L}EA;{[QN]|[E{I|L}]|[KN]}[KA]A{I|L}{I|L}EA 10.808;9.8401;8.7174;8.5995;7.7493;7.6314;7.5846;7.5767;7.0066;6.8225 +;-;-;-;-;-;-;-;-;- + 650 1 1.839 57623.9 0.3899999856948852 3997 5964 9961 SUDHL4_400M_050219_2,9963 SUDHL4_400M_050219_2,9963,QLLSAIIEA True True QLLSAIIEA 57.11464 957.561816394329 523609.96875 9961.0 ENST00000515643.1_1_1:154680226-154680694:-|nuORF;;nc|ENSG00000143603|Q9UGI6-3|KCNN3;;ENSG00000143603|ENST00000271915|KCNN3;;nc|ENSG00000143603|Q9UGI6-2|KCNN3 5.462499936421712 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9968 57.141 646.0 233690.0 25 0 9318.1 + 12062 GQFDGLVEL 9 92 977.4950630632586 976.4877865966586 1 977.4940063357352 MULTI CID FTMS 0 0 0 9967 139974.875 0.7974536011893449 -6 0.0404739379882812 1 Unmodified _GQFDGLVEL_ ENSG00000074370|ENST00000397041|ATP2A3;nc|ENSG00000074370|Q93084-1|ATP2A3;nc|ENSG00000074370|Q93084-3|ATP2A3;nc|ENSG00000074370|Q93084-4|ATP2A3;nc|ENSG00000074370|Q93084-5|ATP2A3;nc|ENSG00000074370|Q93084-6|ATP2A3;nc|ENSG00000074370|Q93084-7|ATP2A3 99.7552728972412 0.0110101799492648 6 {[QG]|[NA]}{M(Oxidation (M))|F}DG{I|L}VE{I|L} 9 0 + 74.355 0.0 0.0 7.6146 7.6146 89.304 0.0 0.0 0.0 6.59256854528806 16.478174818886366 6.59256854528806 6.59256854528806 0 0.8851518780601924 0.0 1.0044321917401078 1.8169015600442573 + + {[QG]|[NA]}{M(Oxidation (M))|F}DG{I|L}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{[QG]|[NA]}VE{I|L};{[QG]|[NA]}{M(Oxidation (M))|F}DG{I|L}EV{I|L};{NN|[MP]|[D{I|L}]|[EV]}[{M(Oxidation (M))|F}E]{I|L}VE{I|L};{[VA]|[{I|L}G]}D{M(Oxidation (M))|F}{[QG]|[NA]}VE{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}V{[QG]|[NA]}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}GV{M(Oxidation (M))|F}{[QG]|[NA]}E{I|L};{NN|[MP]|[D{I|L}]|[EV]}G{M(Oxidation (M))|F}{[QG]|[NA]}EV{I|L};{[QN]|[E{I|L}]|[KN]}{[{M(Oxidation (M))|F}D]|MM}{I|L}VE{I|L};{[VA]|[{I|L}G]}DV{M(Oxidation (M))|F}{[QG]|[NA]}E{I|L} 7.6146;6.9394;6.2502;6.0957;5.944;5.7949;5.7949;5.5751;5.1003;4.7996 +;-;-;-;-;-;-;-;-;- + 6697 1 1.839 98255.5 1.0 3998 5968 9967 SUDHL4_400M_050219_2,9968 SUDHL4_400M_050219_2,9968,GQFDGLVEL True True GQFDGLVEL 57.14052 977.494006335735 1039652.25 9967.0 nc|ENSG00000074370|Q93084-3|ATP2A3;;ENSG00000074370|ENST00000397041|ATP2A3;;nc|ENSG00000074370|Q93084-1|ATP2A3;;nc|ENSG00000074370|Q93084-4|ATP2A3;;nc|ENSG00000074370|Q93084-6|ATP2A3;;nc|ENSG00000074370|Q93084-5|ATP2A3;;nc|ENSG00000074370|Q93084-7|ATP2A3 3.011751413345337 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9972 57.165 800.0 134210.0 25 0 31079.0 + 37469 TLFDYEVRL 9 82 578.3061768519901 1154.5978007707802 2 578.3052856326103 MULTI CID FTMS 0 0 0 9971 61858.14453125 0.2029349337370173 -15 0.1522140502929687 1 Unmodified _TLFDYEVRL_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1;UHRF1-KDM4B|1|fusion;UHRF1-KDM4B|2|fusion 28.49450938151212 0.1686335738423394 6 T{I|L}{M(Oxidation (M))|F}DYEV[R{I|L}] 9 0 + 78.862 0.0 0.0 6.8302 6.8302 93.724 0.0 0.0 0.0 61.63856802638669 5.642492736872597 5.642492736872597 18.750612633917 0 0.4247425010840047 2.0 0.0 0.0 + + T{I|L}{M(Oxidation (M))|F}DYEV[R{I|L}];T{I|L}{M(Oxidation (M))|F}D{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[R{I|L}];T{I|L}{I|L}{M(Oxidation (M))|F}D{[YD]|[{M(Oxidation (M))|F}M]}[R{I|L}];T{I|L}{M(Oxidation (M))|F}{I|L}D{[YD]|[{M(Oxidation (M))|F}M]}[R{I|L}];{[{M(Oxidation (M))|F}D]|MM}{I|L}{M(Oxidation (M))|F}{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}[VP];{[{M(Oxidation (M))|F}D]|MM}{I|L}{M(Oxidation (M))|F}{[SA]|[TG]}{I|L}{M(Oxidation (M))|F}[VP];[VP]YY{[SA]|[TG]}{M(Oxidation (M))|F}{I|L}[VP];[VP]YY{[SA]|[TG]}{I|L}{M(Oxidation (M))|F}[VP] 6.8302;5.2062;5.0145;4.9455;1.9191;1.85;1.0171;0.94808 +;-;-;-;-;-;-;- + 191 + 1 1.839 85713.7 0.3300000131130218 3999 5971 9971 SUDHL4_400M_050219_2,9972 SUDHL4_400M_050219_2,9972,TLFDYEVRL False True TLFDYEVRL 57.164851 578.30528563261 2984163.0 9971.0 chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;;UHRF1-KDM4B|2|fusion;;UHRF1-KDM4B|1|fusion;;nc|ENSG00000276043|Q96T88-2|UHRF1;;ENSG00000276043|ENST00000650932|UHRF1 6.900064309438069 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9977 57.193 800.0 197510.0 25 0 17858.0 + 20585 LLNWSVLY 8 94 1007.5556761986882 1006.548399732088 1 1007.555041491985 MULTI CID FTMS 0 0 0 9976 174280.0 0.2541432899036991 23 -0.1960182189941406 1 Unmodified _LLNWSVLY_ REV__ENST00000540651.5_1_1:228286768-228286816:+|nuORF 77.98433622928108 0.1005472218284828 6 [PA]N{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y 9 -1 + 84.208 0.0 0.0 8.3661 8.3661 86.69 0.0 0.0 0.0 2.773313469426242 9.6542432545843 2.773313469426242 2.773313469426242 0 0.5010912013506126 1.6989700043360187 0.0 1.6624379954164592 [PA]N{M(Oxidation (M))|F}{I|L}G{I|L}{I|L}Y;{I|L}{I|L}NPA{M(Oxidation (M))|F}G{I|L}Y;[PA]N{M(Oxidation (M))|F}{I|L}{I|L}G{I|L}Y;[PA]{M(Oxidation (M))|F}N{I|L}G{I|L}{I|L}Y;[PA]N{I|L}{I|L}{M(Oxidation (M))|F}G{I|L}Y;[PA]N{I|L}{M(Oxidation (M))|F}G{I|L}{I|L}Y;[PA]{M(Oxidation (M))|F}G{I|L}N{I|L}{I|L}Y;[PA]N{M(Oxidation (M))|F}G{I|L}{I|L}{I|L}Y;[PA]{M(Oxidation (M))|F}N{I|L}{I|L}G{I|L}Y;[PA]{M(Oxidation (M))|F}{I|L}GN{I|L}{I|L}Y 8.3661;8.0905;8.067;7.892;7.7561;7.6839;7.6559;7.6437;7.593;7.4809 -;-;-;-;-;-;-;-;-;- 4005 1 1.839 105733.4 0.5299999713897705 4000 5975 9976 SUDHL4_400M_050219_2,9977 SUDHL4_400M_050219_2,9977,LLNWSVLY False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9981 57.218 800.0 34980.0 25 0 1583.2 + 33132 GVIDAYMTL 9 62 982.4904860019648 981.4832095353648 1 982.4969970583916 MULTI CID FTMS 0 0 0 9980 48672.0625 0.2271488416401673 24 -0.2260818481445312 1 Unmodified _SEVCAFLIT_ ENSG00000253729|ENST00000314191|PRKDC;nc|ENSG00000253729|P78527-2|PRKDC 15.847184025352805 0.4077185912009129 6 {[QV]|[N{I|L}]|[RA]|[KV]}DYM{I|L}[{I|L}T] 8 5 + 32.867 0.0 0.0 3.3487 3.3487 69.556 0.0 0.0 0.0 4.6040937697618745 17.902215944156904 4.6040937697618745 0.2422750325201406 0 0.5 0.0 0.3252574989159953 0.0 {[QV]|[N{I|L}]|[RA]|[KV]}DYM{I|L}[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}DY{I|L}M[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}YM[{I|L}T];{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}{M(Oxidation (M))|F}RAM[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}DY[KS]{[QD]|[EN]|[WG]|[KD]|[RS]};{[QV]|[N{I|L}]|[RA]|[KV]}D{I|L}[HQ]{[QD]|[EN]|[WG]|[KD]|[RS]};[{I|L}T][YG][PS]M[{I|L}T];{[QV]|[N{I|L}]|[RA]|[KV]}DY[TP]{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]};[{I|L}T][YG]R{M(Oxidation (M))|F}[EP];[{I|L}T]{[DS]|[MA]|[CV]|TT}{[DS]|[MA]|[CV]|TT}M[{I|L}T] 3.3487;3.324;3.0173;2.2373;1.2602;0.95351;0.80128;0.59743;0.58749;0.55056 -;-;-;-;-;-;-;-;-;- 304 1 1.839 30639.2 0.9200000166893004 4001 5978 9980 SUDHL4_400M_050219_2,9981 SUDHL4_400M_050219_2,9981,SEVCAFLIT False False GVIDAYMTL 57.217821 982.496997058392 1202445.0 9980.0 ENSG00000253729|ENST00000314191|PRKDC;;nc|ENSG00000253729|P78527-2|PRKDC 0.1169957717259724 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9982 57.231 768.0 122340.0 25 0 5169.1 -1 0 83 791.3732465129409 2371.0979101390226 3 791.7081176638603 MULTI CID FTMS 0 0 0 9980 97442.53125 0.8910974020907987 -30 0.2900505065917969 2 6 {[HG]|PP}APPGDCNGVQM 13 -1 50.872 0.0 0.0 2.1455 0.0 0.0 0.0 1104.5470601247976 1104.5470601247976 31.96627227815593 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.3252574989159953 0.0 {[HG]|PP}APPGDCNGVQM 2.1455 - 6181 1 1.839 73588.3 1.0 4002 5978 9980 SUDHL4_400M_050219_2,9982 SUDHL4_400M_050219_2,9982, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9983 57.239 414.0 110990.0 25 0 9537.7 + 41961 VQLGLLPAL 9 57 923.592196221199 922.5849197545988 1 923.5943481326104 MULTI CID FTMS 0 0 0 9980 85085.03125 0.5763104919471776 11 -0.1277046203613281 3 Unmodified _VQLGLLPAL_ REV__ENST00000372264.3_1_9:134183814-134184315:+|nuORF 28.486842064014134 0.1687311288560894 6 {[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}{I|L}V 6 -1 36.375 0.0 0.0 3.9427 0.0 0.0 0.0 296.16100474930994 296.16100474930994 26.91122510072759 0.0 0.0 0.0 0 0.9247425010840048 0.0 0.0 0.7742275032520141 {[QV]|[N{I|L}]|[RA]|[KV]}A{I|L}{I|L}V 3.9427 - 94 1 1.839 38805.4 1.0 4003 5978 9980 SUDHL4_400M_050219_2,9983 SUDHL4_400M_050219_2,9983,VQLGLLPAL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9992 57.283 800.0 130690.0 25 0 24326.0 -1 0 54 689.3871291679607 688.3798527013606 1 689.3868896365166 MULTI CID FTMS 0 0 0 9991 99481.078125 0.9064422890198824 1 -0.0302276611328125 1 6 A{I|L}PE{I|L}{M(Oxidation (M))|F} 6 -1 + 68.426 0.0 0.0 9.9402 9.9402 90.569 0.0 0.0 0.0 5.40078657710113 5.40078657710113 5.40078657710113 5.40078657710113 0 1.6549471895720984 1.2218487496163564 0.3494850021680094 0.0 A{I|L}PE{I|L}{M(Oxidation (M))|F};[EP]{I|L}A{I|L}{M(Oxidation (M))|F};[{I|L}A]PE{I|L}{M(Oxidation (M))|F};{[QN]|[E{I|L}]|[KN]}PA{I|L}{M(Oxidation (M))|F} 9.9402;9.1556;7.7758;5.0615 -;-;-;- 80 + 1 1.839 79028.1 0.3799999952316284 4004 5986 9991 SUDHL4_400M_050219_2,9992 SUDHL4_400M_050219_2,9992, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9993 57.297 800.0 96775.0 25 0 11595.0 + 39810 VETAVLMSLC 10 103 533.269620886261 1064.524688839322 2 533.2699462771416 MULTI CID FTMS 0 0 0 9991 85492.078125 0.436019000778484 -15 0.1181831359863281 2 Unmodified _VETAVLMSLC_ REV__ENSG00000198915|ENST00000395810|RASGEF1A;REV__nc|ENSG00000198915|Q8N9B8-2|RASGEF1A 30.63653989081413 0.2803493085145199 6 [{I|L}A]TDV{I|L} 6 -1 41.532 0.0 0.0 3.9015 0.0 0.0 0.0 449.1511896540282 449.1511896540282 18.38529254472141 0.0 0.0 0.0 0 0.4247425010840047 2.0 1.2134679910804405 0.0 [{I|L}A]TDV{I|L} 3.9015 - 1177 1 1.839 62970.2 0.3300000131130218 4005 5986 9991 SUDHL4_400M_050219_2,9993 SUDHL4_400M_050219_2,9993,VETAVLMSLC False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 9996 57.317 800.0 105210.0 25 0 11862.0 + 20331 LLFEGEKITI 10 96 581.8399036392339 1161.6652543452676 2 581.8397094607353 MULTI CID FTMS 0 0 0 9995 78399.375 0.9106044816993828 1 -0.0281639099121093 1 Unmodified _LLFEGEKITI_ ENSG00000168255|ENST00000513506|POLR2J3;ENSG00000228049|ENST00000333432|POLR2J2;ENST00000504101.1_1_7:102210280-102212998:-|nuORF;nc|ENSG00000228049|Q9GZM3-2|POLR2J2;nc|ENSG00000285437|Q9H1A7|POLR2J3 59.012897905743536 0.0391755228671419 6 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}T{I|L}GE 9 6 73.953 0.0 0.0 6.3661 0.0 0.0 0.0 125.07235132388908 125.07235132388908 20.7158463977178 0.0 0.0 0.0 0 0.805462187404089 2.0 2.2242887089386456 0.0 {I|L}{I|L}{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}T{I|L}GE 6.3661 - 1250 + 1 1.839 64999.9 0.3300000131130218 4006 5988 9995 SUDHL4_400M_050219_2,9996 SUDHL4_400M_050219_2,9996,LLFEGEKITI True True LLFEGEKITI 57.317327 581.839709460735 418186.75 9995.0 ENSG00000228049|ENST00000333432|POLR2J2;;ENST00000504101.1_1_7:102210280-102212998:-|nuORF;;nc|ENSG00000285437|Q9H1A7|POLR2J3;;nc|ENSG00000228049|Q9GZM3-2|POLR2J2;;ENSG00000168255|ENST00000513506|POLR2J3 4.681977192560832 2.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 9997 57.329 675.0 92380.0 25 0 12579.0 -1 0 52 1187.0568035391989 0 1187.048510730267 PEAK CID FTMS 0 0 0 9995 88618.4609375 0.4949324151857377 -20 0.1742897033691406 2 6 PPPP{[CA]|SS}N 7 -1 33.875 0.0 0.0 1.428 0.0 0.0 1529.6708315725598 163.08783899478752 1692.7586705673473 0.0 0.0 0.0 0.0 0 0.5 0.0 0.0 1.555462187404089 PPPP{[CA]|SS}N 1.428 - 199 + 1 1.839 47477.3 1.0 4007 5988 9995 SUDHL4_400M_050219_2,9997 SUDHL4_400M_050219_2,9997, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 9999 57.341 514.0 61413.0 25 0 2740.2 -1 0 58 1081.529289922836 3241.566040368708 3 1081.863696277142 MULTI CID FTMS 0 0 0 9998 113316.484375 0.3850662723964552 11 -0.0780830383300781 1 6 V 1 -1 4.6041 0.0 0.0 0.14203 0.0 0.0 2870.3858778704644 269.08869348697505 3139.47457135744 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.14203 - 7 + 1 1.839 28024.3 1.0 4008 5989 9998 SUDHL4_400M_050219_2,9999 SUDHL4_400M_050219_2,9999, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10010 57.393 800.0 74077.0 25 0 6175.5 -1 0 110 858.9148775588926 1715.8152021845851 2 859.4142333865166 MULTI CID FTMS 0 0 0 10009 71039.65625 0.8565702002537566 -5 0.0201263427734375 1 6 {I|L} 1 -1 12.474 0.0 0.0 0.72702 0.0 0.0 1584.720168470521 0.0 1584.720168470521 0.0 2.016675202793719 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.72702 - 101 + 1 1.839 44560.0 0.9200000166893004 4009 5999 10009 SUDHL4_400M_050219_2,10010 SUDHL4_400M_050219_2,10010, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10011 57.407 800.0 22436.0 25 0 999.51 -1 0 48 1184.197558581829 0 1184.197558581829 PEAK CID FTMS 0 0 0 -1 0 2 6 C 1 -1 2.2185 0.0 0.0 0.09375 0.0 0.0 1656.9955067126832 603.3543795221311 2260.349886234814 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.09375 - 5 + 1 1.839 19539.2 0.3799999952316284 4010 5999 10009 SUDHL4_400M_050219_2,10011 SUDHL4_400M_050219_2,10011, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10013 57.424 800.0 143150.0 25 0 32987.0 + 37470 TLFDYEVRL 9 78 578.3061768519901 1154.5978007707802 2 578.3059570193291 MULTI CID FTMS 0 0 0 10012 116759.609375 0.383047434921127 14 -0.2704849243164062 1 Unmodified _TLFDYEVRL_ chr19:4910246-4910876|36|11.97|0.53|4.49|+|ENST00000615884|UHRF1,UHRF1;ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1;UHRF1-KDM4B|1|fusion;UHRF1-KDM4B|2|fusion 38.17557092003332 0.0854718145212029 6 [{I|L}T]{M(Oxidation (M))|F}DYEV[R{I|L}] 9 0 + 73.364 0.0 0.0 6.354 6.354 87.051 0.0 0.0 0.0 27.147642715192504 7.513487579716767 7.513487579716767 7.513487579716767 0 0.4247425010840047 2.0 0.0 1.024227503252014 + + [{I|L}T]{M(Oxidation (M))|F}DYEV[R{I|L}];[{I|L}T]{M(Oxidation (M))|F}DYE{I|L}[RV];[{I|L}T]{I|L}{M(Oxidation (M))|F}D{[YD]|[{M(Oxidation (M))|F}M]}[R{I|L}];[{I|L}T]{M(Oxidation (M))|F}{I|L}D{[YD]|[{M(Oxidation (M))|F}M]}[R{I|L}];[{I|L}T]{M(Oxidation (M))|F}D{I|L}{[YD]|[{M(Oxidation (M))|F}M]}[R{I|L}];[{I|L}T]{I|L}{M(Oxidation (M))|F}D[YE][RV];[{I|L}T]{M(Oxidation (M))|F}{I|L}D[YE][RV];[{I|L}T]{M(Oxidation (M))|F}D{I|L}[YE][RV];[{I|L}T]{I|L}{M(Oxidation (M))|F}[RV]Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]};[{I|L}T]{M(Oxidation (M))|F}{I|L}[RV]Y{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]} 6.354;5.7033;4.862;4.793;4.751;4.2113;4.1423;4.1003;3.8246;3.7556 +;-;-;-;-;-;-;-;-;- + 327 + 1 1.839 89884.2 0.449999988079071 4011 6000 10012 SUDHL4_400M_050219_2,10013 SUDHL4_400M_050219_2,10013,TLFDYEVRL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10016 57.444 800.0 211890.0 25 0 15077.0 + 11631 GLALLYSGV 9 131 892.514585217575 891.507308750975 1 892.5123779177666 MULTI CID FTMS 0 0 0 10015 169635.125 0.7777373506485618 -7 0.0666122436523437 1 Unmodified _GLALLYSGV_ ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000236067.8_1_1:44440634-44441766:+|nuORF;ENST00000468183.5_1_1:44440655-44441072:+|nuORF;ENST00000496131.1_1_1:44440655-44442052:+|nuORF 89.42679046578446 0.015225546354407 6 {[VA]|[{I|L}G]}A{I|L}{I|L}YSGV 9 0 + 71.646 0.0 0.0 8.0365 8.0365 89.599 0.0 0.0 0.0 7.183985561743441 3.9524249272868417 3.9524249272868417 6.131382658072312 0 1.4604093769761874 0.7695510786217261 0.7742275032520141 0.0 + + {[VA]|[{I|L}G]}A{I|L}{I|L}YSGV;{[VA]|[{I|L}G]}A{I|L}{I|L}SYGV;{[VA]|[{I|L}G]}A{I|L}Y{I|L}SGV;[Q{I|L}]{I|L}{I|L}YSGV;{[VA]|[{I|L}G]}A{I|L}YS{I|L}GV;[AG]{I|L}{I|L}{I|L}YSGV;[Q{I|L}]{I|L}{I|L}SYGV;{[VA]|[{I|L}G]}A{I|L}SY{I|L}GV;[Q{I|L}]{I|L}Y{I|L}SGV;{[VA]|[{I|L}G]}A{I|L}S{I|L}YGV 8.0365;7.3487;7.3068;7.2307;6.9133;6.5771;6.5429;6.5232;6.501;6.229 +;-;-;-;-;-;-;-;-;- + 1892 1 1.839 112747.1 0.800000011920929 4012 6002 10015 SUDHL4_400M_050219_2,10016 SUDHL4_400M_050219_2,10016,GLALLYSGV True True GLALLYSGV 57.443886 892.512377917767 1080174.0 10015.0 ENSG00000117410|ENST00000472174|ATP6V0B;;ENST00000236067.8_1_1:44440634-44441766:+|nuORF;;ENST00000468183.5_1_1:44440655-44441072:+|nuORF;;ENST00000496131.1_1_1:44440655-44442052:+|nuORF 6.9001545906066895 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10020 57.462 399.0 39786.0 25 0 5732.4 + -1 SLWPSPEQL 9 34 1056.630597905353 0 1056.405810534954 PEAK CID FTMS 0 0 0 10019 13066.392578125 0.2083623270801106 9 -0.2256927490234375 1 ENSG00000179271|ENST00000316939|GADD45GIP1 6 D{I|L}{I|L}V 4 -1 17.423 0.0 0.0 0.82524 0.0 0.0 1185.7364632894185 482.2252596490844 1667.9617229385028 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D{I|L}{I|L}V 0.82524 - 21 + 1 1.839 21566.1 1.0 4013 6005 10019 SUDHL4_400M_050219_2,10020 SUDHL4_400M_050219_2,10020, False False SLWPSPEQL 57.461718 1056.40581053495 611453.9375 10019.0 ENSG00000179271|ENST00000316939|GADD45GIP1 3.9989571571350098 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10021 57.471 538.0 37797.0 25 0 1382.4 -1 0 62 1131.844653308392 0 1131.844653308392 PEAK CID FTMS 0 0 0 -1 0 2 6 R 1 -1 4.6041 0.0 0.0 0.20357 0.0 0.0 1573.997948118934 528.5584200494749 2102.556368168409 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.20357 - 2 + 1 1.839 23266.5 1.0 4014 6005 10019 SUDHL4_400M_050219_2,10021 SUDHL4_400M_050219_2,10021, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10024 57.484 357.0 243620.0 25 0 11183.0 -1 0 93 791.3732465129409 2371.0979101390226 3 791.7090331912041 MULTI CID FTMS 0 0 0 10023 65676.4375 0.6006012167795437 -1 0.0038375854492187 1 6 {[HG]|PP}AGDPPC[RN]AGM 13 -1 36.451 0.0 0.0 1.5373 0.0 0.0 0.0 1104.5462584009697 1104.5462584009697 17.734968757449437 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.7302046884880937 0.0 {[HG]|PP}AGDPPC[RN]AGM 1.5373 - 4176 1 1.839 68090.4 1.0 4015 6007 10023 SUDHL4_400M_050219_2,10024 SUDHL4_400M_050219_2,10024, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10025 57.498 800.0 111900.0 25 0 1061.5 -1 FSYRWLWWQPW 11 121 848.9069409170033 0 849.0876953005791 PEAK CID FTMS 0 0 0 -1 0 2 Acetyl (Protein N-term) _(Acetyl (Protein N-term))FSYRWLWWQPW_ chr12:54282820-54283827|48|46.79|0.0|22.16|+|1|HNRNPA1,HNRNPA1|1 0.0 0.4761840153648598 6 Y 1 -1 4.6041 0.0 0.0 0.2715 0.0 0.0 595.9948377892816 933.708139287756 1529.7029770770378 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.2715 + + 49 + 1 1.839 59572.9 0.8299999833106995 4016 6007 10023 SUDHL4_400M_050219_2,10025 SUDHL4_400M_050219_2,10025,FSYRWLWWQPW False False False False splicing PXD020620_cell_line SUDHL4_400M_050219_2 10026 57.503 273.0 176500.0 25 0 3576.8 -1 0 77 932.8294974744272 0 932.8453857302666 PEAK CID FTMS 0 0 0 -1 0 3 6 M 1 -1 6.9897 0.0 0.0 0.37506 0.0 0.0 931.2411349861608 798.3479796385133 1729.589114624674 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 M 0.37506 - 5 + 1 1.839 34533.9 1.0 4017 6007 10023 SUDHL4_400M_050219_2,10026 SUDHL4_400M_050219_2,10026, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10029 57.523 800.0 146480.0 25 0 11977.0 + -1 MLSPFISSV 9 113 980.5111230318912 0 980.5132934451104 PEAK CID FTMS 0 0 0 10028 157343.0 1.0 0 0.0 1 nc|ENSG00000158019|Q9NXR7-4|BABAM2;nc|ENSG00000158019|Q9NXR7-1|BABAM2;ENST00000492702.1_1_2:28117423-28117564:+|nuORF;nc|ENSG00000158019|Q9NXR7-3|BABAM2;ENST00000496951.1_1_2:28117423-28152780:+|nuORF;ENSG00000158019|ENST00000379624|BABAM2 6 SS{I|L}M{I|L}S 6 -1 47.472 0.0 0.0 2.4233 0.0 0.0 1096.5804123852356 241.09908472232652 1337.6794971075622 0.0 0.0 0.0 0.0 0 0.0 0.0 2.234636880228201 0.0 SS{I|L}M{I|L}S 2.4233 - 2877 + 1 1.839 81505.9 0.5600000023841858 4018 6009 10028 SUDHL4_400M_050219_2,10029 SUDHL4_400M_050219_2,10029, False False MLSPFISSV 57.523078 980.51329344511 1364356.625 10028.0 nc|ENSG00000158019|Q9NXR7-4|BABAM2;;nc|ENSG00000158019|Q9NXR7-1|BABAM2;;ENST00000492702.1_1_2:28117423-28117564:+|nuORF;;nc|ENSG00000158019|Q9NXR7-3|BABAM2;;ENST00000496951.1_1_2:28117423-28152780:+|nuORF;;ENSG00000158019|ENST00000379624|BABAM2 7.918617248535156 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10030 57.537 800.0 410380.0 25 0 38339.0 + 11916 GLYPNLIQV 9 115 1016.5777586721993 1015.5704822055992 1 1016.578295886517 MULTI CID FTMS 0 0 0 10028 306251.03125 0.7972481851275641 -5 0.0587387084960937 2 Unmodified _GLYPNLIQV_ ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30;nc|ENSG00000132153|Q7L2E3-3|DHX30 112.59319219568356 0.0043923200227745 6 [NP]{I|L}{I|L}GY{I|L}QV 9 6 + 85.728 0.0 0.0 8.4414 8.4414 88.726 0.0 0.0 0.0 18.53871964321762 16.478174818886373 16.478174818886373 4.463950151760656 0 0.7614393726401688 1.154901959985743 0.0 1.7971062485323517 [NP]{I|L}{I|L}GY{I|L}QV;[NP]{I|L}{I|L}YG{I|L}QV;[NP]{I|L}YG{I|L}{I|L}QV;[NP]{I|L}{I|L}G{I|L}YQV;[NP]{I|L}{I|L}GY{I|L}[AG]V;[NP]{I|L}Y{I|L}G{I|L}QV;[NP]Y{I|L}G{I|L}{I|L}QV;[NP]{I|L}{I|L}YG{I|L}[AG]V;[NP]{I|L}{I|L}GYQ{I|L}V;[NP]{I|L}YG{I|L}{I|L}[AG]V 8.4414;8.0018;7.8064;7.6795;7.5347;7.2312;7.1181;7.0951;7.0724;6.8997 -;-;-;-;-;-;-;-;-;- 3369 1 1.839 204507.0 0.9700000286102296 4019 6009 10028 SUDHL4_400M_050219_2,10030 SUDHL4_400M_050219_2,10030,GLYPNLIQV True True GLYPNLIQV 57.536944 1016.57829588652 2769388.25 10028.0 nc|ENSG00000132153|Q7L2E3-3|DHX30;;nc|ENSG00000132153|Q7L2E3-2|DHX30;;ENSG00000132153|ENST00000445061|DHX30 7.081530570983887 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10031 57.541 232.0 247660.0 25 0 3502.9 -1 0 102 915.8168870706776 0 915.9005004763604 PEAK CID FTMS 0 0 0 -1 0 3 6 Q 1 -1 6.9897 0.0 0.0 0.38203 0.0 0.0 786.1445979644583 912.3895968072874 1698.5341947717457 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.38203 - 61 + 1 1.839 44204.7 1.0 4020 6009 10028 SUDHL4_400M_050219_2,10031 SUDHL4_400M_050219_2,10031, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10033 57.559 800.0 80375.0 25 0 10356.0 -1 LISDLLTCM 9 95 533.269620886261 1064.524688839322 2 533.2696411013603 MULTI CID FTMS 0 0 0 10032 68004.390625 0.3468298712485205 9 -0.3328208923339844 1 Carbamidomethyl (C) _LISDLLTC(Carbamidomethyl (C))M_ ENST00000171887.8_1_2:218667769-218668381:-|nuORF 12.531546534597751 0.4974689918368763 6 [{I|L}A]TDV 5 -1 24.513 0.0 0.0 2.3028 0.0 0.0 0.0 562.2359064509031 562.2359064509031 -0.0867180744628193 0.0 -0.0867180744628193 0.0 0 0.0 2.0 0.4247425010840047 0.0 [{I|L}A]TDV 2.3028 - 361 1 1.861 57235.2 0.3600000143051147 4021 6010 10032 SUDHL4_400M_050219_2,10033 SUDHL4_400M_050219_2,10033,LISDLLTCM False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 10034 57.573 800.0 108850.0 25 0 15587.0 + 17404 KMPDDVWLV 9 89 551.7841979433364 1101.553842953473 2 551.7831909060478 MULTI CID FTMS 0 0 0 10032 95651.0234375 1.0 0 0.0 2 Unmodified _KMPDDVWLV_ ENSG00000110514|ENST00000706887|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6|MADD 45.69961567697781 0.0497987121815769 6 [W{I|L}][DG]DVW{I|L}V 9 3 + 63.254 0.0 0.0 5.7423 5.7423 84.883 0.0 0.0 0.0 7.245462655597095 16.478174818886373 7.245462655597095 7.245462655597095 0 0.8807196863200843 1.6989700043360187 0.7614393726401688 0.0 [W{I|L}][DG]DVW{I|L}V;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}[DP]DVW{I|L}V;{[RE]|[WV]}{[DA]|[EG]}DVW{I|L}V;{[RE]|[WV]}[WD]VW{I|L}V;{[RE]|[WV]}[WD]V{[DA]|[EG]}{I|L}V 5.7423;5.0845;4.8831;4.5683;3.7275 -;+;-;-;- + 549 1 1.861 71290.4 0.3499999940395355 4022 6010 10032 SUDHL4_400M_050219_2,10034 SUDHL4_400M_050219_2,10034,KMPDDVWLV True True KMPDDVWLV 57.572661 551.783190906048 521950.375 10032.0 ENSG00000110514|ENST00000706887|MADD;;nc|ENSG00000110514|Q8WXG6-8|MADD;;nc|ENSG00000110514|Q8WXG6-4|MADD;;nc|ENSG00000110514|Q8WXG6-5|MADD;;nc|ENSG00000110514|Q8WXG6-6|MADD;;nc|ENSG00000110514|Q8WXG6-7|MADD;;nc|ENSG00000110514|Q8WXG6-3|MADD;;nc|ENSG00000110514|Q8WXG6-2|MADD;;nc|ENSG00000110514|Q8WXG6|MADD 5.72004238764445 2.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10035 57.576 186.0 416610.0 25 0 28633.0 -1 0 124 869.0544519189971 0 869.0518676638603 PEAK CID FTMS 0 0 0 10032 123730.0234375 1.0 0 0.0 3 6 WYATA{I|L} 6 -1 22.172 0.0 0.0 1.2771 0.0 0.0 876.6699867463941 151.05227075748283 1027.722257503877 0.0 0.0 0.0 0.0 0 0.0 0.0 0.4247425010840047 0.0 WYATA{I|L} 1.2771 - 121 + 1 1.861 54902.3 1.0 4023 6010 10032 SUDHL4_400M_050219_2,10035 SUDHL4_400M_050219_2,10035, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10036 57.585 466.0 146550.0 25 0 19398.0 -1 0 93 1059.503466784954 0 1059.503466784954 PEAK CID FTMS 0 0 0 -1 0 4 6 Q 1 -1 6.9897 0.0 0.0 0.33017 0.0 0.0 1201.5663074939332 784.3338106744749 1985.900118168408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.33017 - 19 + 1 1.861 45167.8 1.0 4024 6010 10032 SUDHL4_400M_050219_2,10036 SUDHL4_400M_050219_2,10036, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10037 57.598 800.0 300340.0 25 0 12939.0 -1 0 219 898.1466685714715 0 898.1180908083916 PEAK CID FTMS 0 0 0 -1 0 5 6 A 1 -1 6.9897 0.0 0.0 0.38955 0.0 0.0 1013.839283332593 706.3795870416624 1720.2188703742554 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.38955 - 290 + 1 1.861 150638.0 0.4300000071525574 4025 6010 10032 SUDHL4_400M_050219_2,10037 SUDHL4_400M_050219_2,10037, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10039 57.615 800.0 162430.0 25 0 16136.0 -1 0 111 1187.0568035391989 0 1187.061083972454 PEAK CID FTMS 0 0 0 10038 50360.44921875 0.2812621489697673 1 -0.0429153442382812 1 6 PPPPN 5 -1 38.998 0.0 0.0 1.644 0.0 0.0 1529.667379964539 337.15119902840684 1866.8185789929453 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 1.555462187404089 PPPPN 1.644 - 1836 + 1 1.861 79580.7 0.699999988079071 4026 6011 10038 SUDHL4_400M_050219_2,10039 SUDHL4_400M_050219_2,10039, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10040 57.621 386.0 249360.0 25 0 10939.0 -1 0 144 936.8578188941684 0 936.8563110232352 PEAK CID FTMS 0 0 0 10038 125989.0703125 1.0 0 0.0 2 6 S 1 -1 5.0299 0.0 0.0 0.26874 0.0 0.0 1649.59974926119 132.0460604303344 1781.6458096915244 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1050541008457974 0.0 S 0.26874 - 18 + 1 1.861 60482.0 1.0 4027 6011 10038 SUDHL4_400M_050219_2,10040 SUDHL4_400M_050219_2,10040, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10041 57.631 540.0 1006900.0 25 0 40289.0 -1 0 318 845.5364564250865 0 845.6395141482353 PEAK CID FTMS 0 0 0 -1 0 3 6 PQQ 3 -1 15.674 0.0 0.0 0.92798 0.0 0.0 961.7182601975494 371.1345248286568 1332.8527850262062 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.4247425010840047 PQQ 0.92798 - 2754 + 1 1.861 338364.0 1.0 4028 6011 10038 SUDHL4_400M_050219_2,10041 SUDHL4_400M_050219_2,10041, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10042 57.634 174.0 1013600.0 25 0 53055.0 -1 0 182 843.1726425142269 0 843.1970092654228 PEAK CID FTMS 0 0 0 -1 0 4 6 QGYY 4 -1 7.6258 0.0 0.0 0.45275 0.0 0.0 1054.0540119798225 116.0512484186156 1170.105260398438 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.25 QGYY 0.45275 - 557 + 1 1.861 113674.9 1.0 4029 6011 10038 SUDHL4_400M_050219_2,10042 SUDHL4_400M_050219_2,10042, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10043 57.641 388.0 242290.0 25 0 16126.0 + 28766 PWWHKWRRWGL 11 166 804.4296124634767 0 804.0151244997978 PEAK CID FTMS 0 0 0 -1 0 5 Unmodified _PWWHKWRRWGL_ REV__ENST00000373115.4_1_10:73771236-73771377:+|nuORF 0.3070304955306653 0.4761840153648598 6 RGY 3 -1 5.6618 0.0 0.0 0.35236 0.0 0.0 1045.569660862697 182.0576571100219 1227.6273179727189 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 RGY 0.35236 - 63 + 1 1.861 64425.9 1.0 4030 6011 10038 SUDHL4_400M_050219_2,10043 SUDHL4_400M_050219_2,10043,PWWHKWRRWGL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 10045 57.652 401.0 106420.0 25 0 6438.7 -1 0 95 974.2281234312308 0 974.5256225466728 PEAK CID FTMS 0 0 0 -1 0 1 6 D 1 -1 5.4846 0.0 0.0 0.28177 0.0 0.0 1645.276027280627 183.11448084049064 1828.3905081211176 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.28177 - 11 + 1 1.941 35680.3 1.0 4031 6012 10044 SUDHL4_400M_050219_2,10045 SUDHL4_400M_050219_2,10045, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10046 57.666 800.0 123220.0 25 0 6138.2 -1 0 152 943.8275024294852 0 943.8275024294852 PEAK CID FTMS 0 0 0 -1 0 2 6 A 1 -1 5.4846 0.0 0.0 0.29086 0.0 0.0 1679.5342335193236 132.04604517154533 1811.580278690869 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.29086 - 144 + 1 1.941 62788.7 0.5899999737739563 4032 6012 10044 SUDHL4_400M_050219_2,10046 SUDHL4_400M_050219_2,10046, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10047 57.669 171.0 723870.0 25 0 37555.0 -1 0 175 855.6443303940005 0 855.9603149294853 PEAK CID FTMS 0 0 0 -1 0 3 6 Y 1 -1 6.9897 0.0 0.0 0.40893 0.0 0.0 1427.13963017101 116.05125604801016 1543.1908862190205 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y 0.40893 - 175 + 1 1.941 81594.3 1.0 4033 6012 10044 SUDHL4_400M_050219_2,10047 SUDHL4_400M_050219_2,10047, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10048 57.674 277.0 75824.0 25 0 3233.1 -1 0 60 1114.074633777142 0 1114.074633777142 PEAK CID FTMS 0 0 0 -1 0 4 6 {M(Oxidation (M))|F} 1 -1 0.088644 0.0 0.0 0.003982 0.0 0.0 1180.531151243934 895.5125826471311 2076.043733891065 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.003982 - 1 + 1 1.941 21796.3 1.0 4034 6012 10044 SUDHL4_400M_050219_2,10048 SUDHL4_400M_050219_2,10048, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10051 57.683 136.0 118010.0 25 0 5614.9 -1 0 48 1131.930590808392 0 1131.930590808392 PEAK CID FTMS 0 0 0 -1 0 1 6 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.30903 0.0 0.0 1059.3591541736216 1052.4041231744752 2111.763277348097 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.30903 - 4 + 1 1.941 22567.6 1.0 4035 6014 10050 SUDHL4_400M_050219_2,10051 SUDHL4_400M_050219_2,10051, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10052 57.686 127.0 504170.0 25 0 27200.0 -1 0 126 850.0168231590641 0 850.0937988162041 PEAK CID FTMS 0 0 0 -1 0 2 6 S 1 -1 4.6041 0.0 0.0 0.27114 0.0 0.0 1491.9129054960592 116.05118738345936 1607.9640928795186 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.27114 - 53 + 1 1.941 45355.3 1.0 4036 6014 10050 SUDHL4_400M_050219_2,10052 SUDHL4_400M_050219_2,10052, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10053 57.698 715.0 676380.0 25 0 6173.8 -1 0 203 874.3325928157151 0 873.9252807497978 PEAK CID FTMS 0 0 0 -1 0 3 6 CPH[{I|L}T]QGYP 9 -1 19.062 0.0 0.0 1.0914 0.0 0.0 565.1452138523301 182.05774866275627 747.2029625150864 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.2396518287104437 CPH[{I|L}T]QGYP 1.0914 - 3869 + 1 1.941 297807.0 1.0 4037 6014 10050 SUDHL4_400M_050219_2,10053 SUDHL4_400M_050219_2,10053, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10054 57.702 232.0 41094.0 25 0 8466.3 -1 0 23 1047.399096667767 0 1047.399096667767 PEAK CID FTMS 0 0 0 -1 0 4 6 {I|L} 1 -1 6.9897 0.0 0.0 0.33399 0.0 0.0 1321.383690306434 655.2956637018186 1976.6793540082529 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.33399 - 1 + 1 1.941 16406.8 1.0 4038 6014 10050 SUDHL4_400M_050219_2,10054 SUDHL4_400M_050219_2,10054, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10055 57.706 166.0 898510.0 25 0 41402.0 -1 0 172 916.6624978076968 0 916.7291747927666 PEAK CID FTMS 0 0 0 -1 0 5 6 E 1 -1 7.4743 0.0 0.0 0.40814 0.0 0.0 1402.1590582601214 297.0834703566386 1699.24252861676 0.0 0.0 0.0 0.0 0 0.0 0.0 0.3494850021680094 0.0 E 0.40814 - 257 + 1 1.941 94311.5 1.0 4039 6014 10050 SUDHL4_400M_050219_2,10055 SUDHL4_400M_050219_2,10055, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10056 57.714 460.0 758780.0 25 0 35481.0 -1 0 258 833.8112629590603 0 834.0291015505791 PEAK CID FTMS 0 0 0 -1 0 6 6 D 1 -1 6.2371 0.0 0.0 0.37447 0.0 0.0 1415.5145618864815 132.0460604303344 1547.560622316816 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0752574989159953 0.0 D 0.37447 - 1557 + 1 1.941 222416.8 1.0 4040 6014 10050 SUDHL4_400M_050219_2,10056 SUDHL4_400M_050219_2,10056, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10057 57.716 99.0 360550.0 25 0 26131.0 + -1 CWRRWPQWCLM 11 92 839.8817240043153 0 839.9489013552666 PEAK CID FTMS 0 0 0 10050 48215.671875 1.0 0 0.0 7 2 Carbamidomethyl (C) _C(Carbamidomethyl (C))WRRWPQWC(Carbamidomethyl (C))LM_ REV__ENST00000315579.9_1_12:6626009-6626543:+|nuORF 0.0 0.4761840153648598 6 A 1 -1 6.9897 0.0 0.0 0.41661 0.0 0.0 1471.642783480507 132.04599939517814 1603.688782875685 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.41661 - 11 + 1 1.941 31662.5 1.0 4041 6014 10050 SUDHL4_400M_050219_2,10057 SUDHL4_400M_050219_2,10057,CWRRWPQWCLM False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 10059 57.725 300.0 104460.0 25 0 2262.3 -1 0 84 1128.977587878704 0 1128.977587878704 PEAK CID FTMS 0 0 0 -1 0 1 6 P 1 -1 5.4846 0.0 0.0 0.24312 0.0 0.0 1947.7929310290888 208.07312952213127 2155.866060551221 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.24312 - 7 + 1 1.993 24591.9 1.0 4042 6015 10058 SUDHL4_400M_050219_2,10059 SUDHL4_400M_050219_2,10059, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10060 57.739 800.0 66356.0 25 0 1004.9 -1 0 107 1171.8497709033552 0 1171.936328113079 PEAK CID FTMS 0 0 0 -1 0 2 6 {M(Oxidation (M))|F} 1 -1 6.9897 0.0 0.0 0.29849 0.0 0.0 1501.2720993244857 690.3256319635374 2191.5977312880227 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.29849 - 8 + 1 1.993 40843.0 0.7900000214576721 4043 6015 10058 SUDHL4_400M_050219_2,10060 SUDHL4_400M_050219_2,10060, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10061 57.744 254.0 1147100.0 25 0 50882.0 -1 0 239 845.9548234357443 5069.685281814865 6 846.2895385622978 MULTI CID FTMS 0 0 0 10058 195708.265625 1.0 0 0.0 3 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NPGQSQ[HS]G 11 -1 28.22 0.0 0.0 0.55664 0.0 0.0 0.0 3940.1966420853296 3940.1966420853296 17.374158910529555 0.0 0.0 0.0 0 0.0 2.0 0.4723525724251878 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NPGQSQ[HS]G 0.55664 - 7443 1 1.993 182584.8 1.0 4044 6015 10058 SUDHL4_400M_050219_2,10061 SUDHL4_400M_050219_2,10061, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10062 57.748 206.0 144920.0 25 0 3638.9 -1 0 80 1147.163623034954 0 1147.163623034954 PEAK CID FTMS 0 0 0 -1 0 4 6 N 1 -1 1.7827 0.0 0.0 0.07777 0.0 0.0 1176.7126697986207 998.5379122369748 2175.2505820355955 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.07777 - 2 + 1 1.993 26856.0 1.0 4045 6015 10058 SUDHL4_400M_050219_2,10062 SUDHL4_400M_050219_2,10062, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10063 57.751 168.0 80100.0 25 0 3839.9 -1 0 38 1067.026049792767 0 1067.026049792767 PEAK CID FTMS 0 0 0 -1 0 5 6 R 1 -1 5.4846 0.0 0.0 0.25724 0.0 0.0 1247.8955311267466 724.9988497369749 1972.8943808637207 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 R 0.25724 - 8 + 1 1.993 18392.2 1.0 4046 6015 10058 SUDHL4_400M_050219_2,10063 SUDHL4_400M_050219_2,10063, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10064 57.756 296.0 982620.0 25 0 47586.0 + 10794 FYQILWKRWLW 11 251 819.9489037353153 0 819.8339721560478 PEAK CID FTMS 0 0 0 10058 49322.0390625 1.0 0 0.0 6 Unmodified _FYQILWKRWLW_ REV__ENST00000356721.3_1_16:48396017-48396254:-|nuORF 0.3506318815782774 0.47618401536486 6 SQPGY 5 -1 18.337 0.0 0.0 1.1196 0.0 0.0 920.5701574688744 182.0576113336547 1102.627768802529 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 SQPGY 1.1196 - 1864 + 1 1.993 183046.6 1.0 4047 6015 10058 SUDHL4_400M_050219_2,10064 SUDHL4_400M_050219_2,10064,FYQILWKRWLW False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 10065 57.764 454.0 100760.0 25 0 6229.2 -1 0 106 972.5770825897556 0 972.9924804568292 PEAK CID FTMS 0 0 0 10058 36135.69140625 0.9478335531961218 -1 0.0379409790039062 7 6 HQ 2 -1 5.0886 0.0 0.0 0.26188 0.0 0.0 884.3475723066614 790.6568087213499 1675.0043810280113 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 HQ 0.26188 - 15 + 1 1.993 39175.5 1.0 4048 6015 10058 SUDHL4_400M_050219_2,10065 SUDHL4_400M_050219_2,10065, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10066 57.77 303.0 1199000.0 25 0 52811.0 -1 0 255 832.5632704372591 0 832.4761230349541 PEAK CID FTMS 0 0 0 -1 0 8 6 TVQGY{M(Oxidation (M))|F} 6 -1 23.109 0.0 0.0 1.3895 0.0 0.0 832.7093108070558 132.04602991275627 964.755340719812 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 TVQGY{M(Oxidation (M))|F} 1.3895 - 5338 + 1 1.993 225101.9 1.0 4049 6015 10058 SUDHL4_400M_050219_2,10066 SUDHL4_400M_050219_2,10066, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10067 57.774 183.0 347690.0 25 0 17050.0 -1 0 133 839.2307568226724 0 839.3987304568291 PEAK CID FTMS 0 0 0 10058 37419.69140625 0.6275324508236091 -3 0.0746040344238281 9 6 D 1 -1 3.0989 0.0 0.0 0.18485 0.0 0.0 780.0203382529636 778.3989962213499 1558.4193344743137 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 D 0.18485 - 17 + 1 1.993 44100.6 1.0 4050 6015 10058 SUDHL4_400M_050219_2,10067 SUDHL4_400M_050219_2,10067, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10068 57.789 800.0 112410.0 25 0 6972.8 -1 0 149 778.1975585818291 0 778.1975585818291 PEAK CID FTMS 0 0 0 -1 0 10 6 D 1 -1 4.6946 0.0 0.0 0.30203 0.0 0.0 1304.2841877429564 132.04596887760002 1436.3301566205564 0.0 0.0 0.0 0.0 0 0.0 0.0 0.1595680409956017 0.0 D 0.30203 - 118 + 1 1.993 64554.2 0.4799999892711639 4051 6015 10058 SUDHL4_400M_050219_2,10068 SUDHL4_400M_050219_2,10068, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10069 57.802 800.0 353180.0 25 0 18362.0 + 10991 GASDEADE 8 254 793.2813813453331 792.274104878733 1 793.2823974490166 MULTI CID FTMS 0 0 0 10058 108634.1328125 1.0 0 0.0 11 Unmodified _GASDEADE_ REV__ENSG00000008735|ENST00000329492|MAPK8IP2;REV__nc|ENSG00000008735|Q13387-2|MAPK8IP2;REV__nc|ENSG00000008735|Q13387-3|MAPK8IP2;REV__nc|ENSG00000008735|Q13387-4|MAPK8IP2 5.760428011301431 0.7893668129297577 6 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGPQ 6 -1 23.522 0.0 0.0 2.969 0.0 0.0 0.0 158.97493152510984 158.97493152510984 12.631740484369228 0.0 0.0 0.0 0 0.0 1.5228787452803376 0.0669015600442578 0.0 {[MC]|[{M(Oxidation (M))|F}S]|[YA]|[HP]}NGPQ 2.969 - 1834 1 1.993 183542.9 0.4300000071525574 4052 6015 10058 SUDHL4_400M_050219_2,10069 SUDHL4_400M_050219_2,10069,GASDEADE False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 10071 57.813 385.0 266250.0 25 0 14274.0 -1 0 163 798.500581044899 0 798.8247558474541 PEAK CID FTMS 0 0 0 10070 36376.8203125 1.0 0 0.0 1 6 YVAV{I|L} 5 -1 16.368 0.0 0.0 1.0262 0.0 0.0 822.5344740021043 224.10480676822505 1046.6392807703294 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 YVAV{I|L} 1.0262 - 132 + 1 2.014 67920.1 1.0 4053 6016 10070 SUDHL4_400M_050219_2,10071 SUDHL4_400M_050219_2,10071, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10072 57.821 439.0 122200.0 25 0 20643.0 + 1549 ALLATLAAYL 10 66 510.3109439405394 1018.6073349478788 2 510.3105651736259 MULTI CID FTMS 0 0 0 10070 246897.96875 0.5819198415911125 -1 0.0864677429199218 2 Unmodified _ALLATLAAYL_ REV__ENSG00000127481|ENST00000375254|UBR4;REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF;REV__nc|ENSG00000127481|Q5T4S7-2|UBR4;REV__nc|ENSG00000127481|Q5T4S7-3|UBR4;REV__nc|ENSG00000127481|Q5T4S7-4|UBR4;REV__nc|ENSG00000127481|Q5T4S7-5|UBR4 67.34385681178166 0.0190221733545476 6 [{I|L}A][TA]{I|L}YA{I|L}A{I|L} 10 -1 + 66.7 0.0 0.0 6.5481 6.5481 80.173 0.0 0.0 0.0 0.6858218677065508 8.507112333562858 0.6858218677065508 0.6858218677065508 0 1.1549471895720984 2.0 0.8494850021680094 0.0 [{I|L}A][TA]{I|L}YA{I|L}A{I|L};[{I|L}A]{I|L}DK{I|L}YA{I|L};[{I|L}A]{I|L}[TA]YA{I|L}A{I|L};[{I|L}A][TA]{I|L}A{I|L}YA{I|L};[{I|L}A][TA]{I|L}AY{I|L}A{I|L};[{I|L}A][TA]Y{I|L}A{I|L}A{I|L};[{I|L}A]{I|L}[TA]A{I|L}YA{I|L};[{I|L}A][TA]YA{I|L}{I|L}A{I|L};[{I|L}A]{I|L}[TA]AY{I|L}A{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}YA{I|L}A{I|L} 6.5481;6.4808;6.0797;6.0284;5.9571;5.8356;5.56;5.5401;5.4887;5.267 -;-;-;-;-;-;-;-;-;- 503 1 2.014 46242.4 1.0 4054 6016 10070 SUDHL4_400M_050219_2,10072 SUDHL4_400M_050219_2,10072,ALLATLAAYL False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 10073 57.835 800.0 33123.0 25 0 1066.2 -1 0 67 1160.360522449017 0 1160.360522449017 PEAK CID FTMS 0 0 0 -1 0 3 6 C 1 -1 4.6041 0.0 0.0 0.19856 0.0 0.0 1633.7232288806529 578.9428804986936 2212.6661093793464 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C 0.19856 - 4 + 1 2.014 24715.8 0.6000000238418579 4055 6016 10070 SUDHL4_400M_050219_2,10073 SUDHL4_400M_050219_2,10073, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10074 57.848 800.0 18776.0 25 0 1875.8 -1 0 35 1195.878588855267 0 1195.878588855267 PEAK CID FTMS 0 0 0 -1 0 4 6 PPPPP 5 -1 21.938 0.0 0.0 0.91802 0.0 0.0 1547.3129991418434 354.1432283990844 1901.456227540928 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 PPPPP 0.91802 - 25 + 1 2.014 21720.9 0.5899999737739563 4056 6016 10070 SUDHL4_400M_050219_2,10074 SUDHL4_400M_050219_2,10074, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10076 57.855 258.0 295370.0 25 0 4860.6 -1 0 98 902.6376867510476 0 902.8840820193292 PEAK CID FTMS 0 0 0 -1 0 1 6 {I|L} 1 -1 6.9897 0.0 0.0 0.38761 0.0 0.0 1374.0700989886202 313.07981287174067 1687.1499118603608 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.38761 - 25 + 1 2.014 51103.6 1.0 4057 6017 10075 SUDHL4_400M_050219_2,10076 SUDHL4_400M_050219_2,10076, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10077 57.861 286.0 588840.0 25 0 30121.0 -1 0 200 819.5487485787571 0 819.2043945193291 PEAK CID FTMS 0 0 0 10075 29120.43359375 0.4384542698591644 1 -0.0220184326171875 2 6 S 1 -1 5.4846 0.0 0.0 0.33502 0.0 0.0 1430.9764816772422 116.05125604801016 1547.0277377252523 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 S 0.33502 - 143 + 1 2.014 108047.3 1.0 4058 6017 10075 SUDHL4_400M_050219_2,10077 SUDHL4_400M_050219_2,10077, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10078 57.865 218.0 242580.0 25 0 4177.6 -1 0 88 1057.464035743638 0 1057.753466784954 PEAK CID FTMS 0 0 0 -1 0 3 6 {M(Oxidation (M))|F} 1 -1 2.4743 0.0 0.0 0.1171 0.0 0.0 904.6779971691138 1058.1214083307252 1962.799405499839 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.1171 - 6 + 1 2.014 33894.8 1.0 4059 6017 10075 SUDHL4_400M_050219_2,10078 SUDHL4_400M_050219_2,10078, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10079 57.87 294.0 185550.0 25 0 9035.9 -1 0 117 921.4204725808504 0 921.4216186404228 PEAK CID FTMS 0 0 0 10075 106874.28125 1.0 0 0.0 4 6 E 1 -1 5.4846 0.0 0.0 0.29794 0.0 0.0 1318.5853166443194 390.1751803033813 1708.7604969477006 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.29794 - 62 + 1 2.014 38356.1 1.0 4060 6017 10075 SUDHL4_400M_050219_2,10079 SUDHL4_400M_050219_2,10079, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10082 57.89 800.0 31200.0 25 0 1070.8 -1 0 69 1043.776416003704 0 1043.776416003704 PEAK CID FTMS 0 0 0 -1 0 1 6 P 1 -1 6.9897 0.0 0.0 0.33515 0.0 0.0 713.0244373767458 1272.4175509088502 1985.441988285596 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P 0.33515 - 4 + 1 2.017 26121.6 0.6800000071525574 4061 6019 10081 SUDHL4_400M_050219_2,10082 SUDHL4_400M_050219_2,10082, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10083 57.898 411.0 187010.0 25 0 2562.7 -1 0 86 855.5695987091634 0 855.2614013552666 PEAK CID FTMS 0 0 0 10081 20087.80859375 1.0 0 0.0 2 6 K 1 -1 5.4846 0.0 0.0 0.3209 0.0 0.0 861.7712031782893 716.2179659479124 1577.9891691262017 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 K 0.3209 - 31 + 1 2.017 49917.5 1.0 4062 6019 10081 SUDHL4_400M_050219_2,10083 SUDHL4_400M_050219_2,10083, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10084 57.905 414.0 94103.0 25 0 2620.3 29890 QRVWDWWHRRR 11 84 840.9375960228991 0 841.0696288943291 PEAK CID FTMS 0 0 0 -1 0 3 Unmodified _QRVWDWWHRRR_ ENST00000583780.1_2_17:18263786-18266854:-|nuORF 0.0 0.4761840153648598 6 Q 1 10 1.9897 0.0 0.0 0.11844 0.0 0.0 954.4255938018543 594.3371065729124 1548.7627003747668 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 + Q 0.11844 + + 4 + 1 2.017 34008.1 1.0 4063 6019 10081 SUDHL4_400M_050219_2,10084 SUDHL4_400M_050219_2,10084,QRVWDWWHRRR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 10086 57.917 554.0 34288.0 25 0 2358.0 -1 0 50 989.0587036013604 0 989.0587036013604 PEAK CID FTMS 0 0 0 -1 0 1 6 Y{I|L}{M(Oxidation (M))|F} 3 -1 10.802 0.0 0.0 0.54663 0.0 0.0 1417.8218006579957 132.0459383600219 1549.8677390180171 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Y{I|L}{M(Oxidation (M))|F} 0.54663 - 24 + 1 2.017 22012.9 1.0 4064 6020 10085 SUDHL4_400M_050219_2,10086 SUDHL4_400M_050219_2,10086, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10087 57.925 446.0 31523.0 25 0 1661.8 -1 0 42 1084.2410630772645 0 1084.147387683392 PEAK CID FTMS 0 0 0 10085 31698.322265625 1.0 0 0.0 2 6 H 1 -1 6.9897 0.0 0.0 0.32263 0.0 0.0 833.0541953910541 1193.3003634088502 2026.354558799904 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.32263 - 4 + 1 2.017 18583.0 1.0 4065 6020 10085 SUDHL4_400M_050219_2,10087 SUDHL4_400M_050219_2,10087, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10088 57.931 310.0 46023.0 25 0 2227.2 -1 0 45 994.1984130740166 0 994.1984130740166 PEAK CID FTMS 0 0 0 -1 0 3 6 H 1 -1 3.4949 0.0 0.0 0.17594 0.0 0.0 1305.3679432361205 540.9202364557249 1846.2881796918448 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 H 0.17594 - 2 + 1 2.017 18274.9 1.0 4066 6020 10085 SUDHL4_400M_050219_2,10088 SUDHL4_400M_050219_2,10088, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10092 57.951 555.0 40018.0 25 0 2568.4 -1 0 53 1001.6526415306158 0 1001.218981921673 PEAK CID FTMS 0 0 0 -1 0 1 6 E 1 -1 5.4846 0.0 0.0 0.27405 0.0 0.0 1182.3258386258815 686.8851412408811 1869.2109798667625 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.27405 - 6 + 1 2.017 24794.3 1.0 4067 6023 10091 SUDHL4_400M_050219_2,10092 SUDHL4_400M_050219_2,10092, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10093 57.954 114.0 659290.0 25 0 34237.0 + 11931 GMLDGLVNV 9 113 917.4761045044128 916.4688280378128 1 917.476123034954 MULTI CID FTMS 0 0 0 10091 416171.5625 0.8381223979953771 2 -0.0323829650878906 2 Unmodified _GMLDGLVNV_ ENSG00000077232|ENST00000264065|DNAJC10;nc|ENSG00000077232|Q8IXB1-3|DNAJC10 78.7280429016045 0.0178249292250809 6 {[MG]|[TS]}{I|L}DG{I|L}VNV 9 0 + 71.736 0.0 0.0 7.8274 7.8274 83.293 0.0 0.0 0.0 0.8091592184437957 14.09256854528806 0.8091592184437957 0.8091592184437957 0 1.535666875892183 0.0 1.329689690656103 0.5 + + {[MG]|[TS]}{I|L}DG{I|L}VNV;{[VA]|[{I|L}G]}DMG{I|L}VNV;{[MG]|[TS]}{I|L}GD{I|L}VNV;{[VA]|[{I|L}G]}MDG{I|L}VNV;[PG]{M(Oxidation (M))|F}DG{I|L}VNV;{[MG]|[TS]}{I|L}DGV{I|L}NV;{[VA]|[{I|L}G]}MGD{I|L}VNV;{[VA]|[{I|L}G]}DMGV{I|L}NV;{[QV]|[N{I|L}]|[RA]|[KV]}MD{I|L}VNV;{[VA]|[{I|L}G]}DGM{I|L}VNV 7.8274;7.7391;7.4989;7.2276;7.0355;6.9534;6.8992;6.8651;6.7671;6.7537 +;-;-;-;-;-;-;-;-;- + 2453 1 2.017 52531.2 1.0 4068 6023 10091 SUDHL4_400M_050219_2,10093 SUDHL4_400M_050219_2,10093,GMLDGLVNV True True GMLDGLVNV 57.953558 917.476123034954 2700822.5 10091.0 nc|ENSG00000077232|Q8IXB1-3|DNAJC10;;ENSG00000077232|ENST00000264065|DNAJC10 7.816535790761311 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10094 57.967 800.0 35573.0 25 0 1849.1 -1 0 65 1002.5599618024108 0 1002.106311023235 PEAK CID FTMS 0 0 0 -1 0 3 6 V 1 -1 3.0989 0.0 0.0 0.15471 0.0 0.0 1360.7624845147143 540.2517794244749 1901.0142639391893 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.15471 - 1 + 1 2.017 29881.1 0.5199999809265137 4069 6023 10091 SUDHL4_400M_050219_2,10094 SUDHL4_400M_050219_2,10094, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10098 57.992 800.0 22323.0 25 0 4724.5 -1 0 36 1107.913989245892 0 1107.913989245892 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 21822.2 0.5699999928474426 4070 6026 10097 SUDHL4_400M_050219_2,10098 SUDHL4_400M_050219_2,10098, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10099 58.006 800.0 239580.0 25 0 33922.0 + + 1550 ALLDKLYAL 9 96 1019.6131337707368 1018.6058573041366 1 1019.612353503704 MULTI CID FTMS 0 0 0 10097 288206.65625 0.8121419926466497 7 -0.1070327758789062 2 Unmodified _ALLATLAAYL_ ENSG00000177971|ENST00000403490|IMP3 78.14939416004806 0.0185844602684931 6 [{I|L}A]{I|L}DK{I|L}YA{I|L} 9 -1 + 101.96 0.0 0.0 10.01 10.01 92.014 0.0 0.0 0.0 17.98455006504028 16.478174818886373 16.478174818886373 7.257724967479859 0 1.1861818737241734 1.6989700043360187 1.548455006504028 0.0 [{I|L}A]{I|L}DK{I|L}YA{I|L};[{I|L}A]{I|L}DKY{I|L}A{I|L};[{I|L}A]{I|L}DK{I|L}AY{I|L};[{I|L}A]{I|L}[TA]A{I|L}YA{I|L};[{I|L}A][TA]{I|L}A{I|L}YA{I|L};[{I|L}A]{I|L}[TA]AY{I|L}A{I|L};[{I|L}A][TA]{I|L}AY{I|L}A{I|L};[{I|L}A]{I|L}DKYA{I|L}{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}{I|L}{I|L}A{I|L}YA{I|L};[{I|L}A]{I|L}[TA]A{I|L}AY{I|L} 10.01;9.2973;9.1983;9.0514;9.0082;8.3389;8.2956;8.268;8.2442;8.2399 -;-;-;-;-;-;-;-;-;- 1104 1 2.017 129107.8 0.8700000047683716 4071 6026 10097 SUDHL4_400M_050219_2,10099 SUDHL4_400M_050219_2,10099,ALLATLAAYL False False ALLDKLYAL 58.005516 1019.6123535037 4678403.25 10097.0 ENSG00000177971|ENST00000403490|IMP3 6.500795841217041 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10100 58.013 414.0 39938.0 25 0 1420.0 -1 0 50 1172.7561801541349 0 1172.620898425579 PEAK CID FTMS 0 0 0 -1 0 3 6 E 1 -1 2.2185 0.0 0.0 0.094666 0.0 0.0 1423.860186380732 787.5793551080686 2211.4395414888004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 E 0.094666 - 1 + 1 2.017 18178.4 1.0 4072 6026 10097 SUDHL4_400M_050219_2,10100 SUDHL4_400M_050219_2,10100, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10104 58.037 800.0 23339.0 25 0 649.82 -1 0 55 1176.184985339642 0 1176.184985339642 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 18616.7 0.5 4073 6029 10103 SUDHL4_400M_050219_2,10104 SUDHL4_400M_050219_2,10104, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10105 58.044 359.0 237040.0 25 0 25677.0 + 11730 GLIEIISNA 9 113 929.5308129778176 928.5235365112176 1 929.5316650271416 MULTI CID FTMS 0 0 0 10103 148929.40625 0.9265761277803534 2 -0.0269584655761718 2 Unmodified _GLIEIISNA_ ENSG00000144028|ENST00000323853|SNRNP200;ENST00000480835.1_1_2:96943505-96944085:-|nuORF;ENST00000497539.5_1_2:96940752-96950410:-|nuORF 71.92227651296345 0.0203558744033348 6 {[QN]|[E{I|L}]|[KN]}{I|L}G{I|L}{I|L}S{[QG]|[NA]} 9 2 + 78.183 0.0 0.0 8.4201 8.4201 87.642 0.0 0.0 0.0 15.617267620601735 7.147642715192504 7.147642715192504 3.3226467981605623 0 1.305462187404089 1.3010299956639813 1.3243923658886183 0.0 {[QN]|[E{I|L}]|[KN]}{I|L}G{I|L}{I|L}S{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}{I|L}G{I|L}S{I|L}{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}{I|L}GS{I|L}{I|L}{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}G{I|L}S{[QG]|[NA]};[{I|L}T][TP]{I|L}{I|L}S{[QG]|[NA]};{[QN]|[E{I|L}]|[KN]}{I|L}{I|L}GS{I|L}{[QG]|[NA]};[{I|L}T][TP]{I|L}S{I|L}{[QG]|[NA]};[{I|L}T][TP]S{I|L}{I|L}{[QG]|[NA]};[{I|L}T]{[VA]|[{I|L}G]}{I|L}D{I|L}{[QG]|[NA]};[{I|L}T]{[VA]|[{I|L}G]}D{I|L}{I|L}{[QG]|[NA]} 8.4201;8.0623;6.9489;6.7682;6.7382;6.4104;6.3803;5.2669;4.6138;4.2346 -;-;-;-;-;-;-;-;-;- 768 1 2.017 59263.4 1.0 4074 6029 10103 SUDHL4_400M_050219_2,10105 SUDHL4_400M_050219_2,10105,GLIEIISNA True True GLIEIISNA 58.04392 929.531665027142 953914.3125 10103.0 ENST00000480835.1_1_2:96943505-96944085:-|nuORF;;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;;ENSG00000144028|ENST00000323853|SNRNP200 4.302229881286621 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10108 58.064 800.0 10864.0 25 0 983.62 -1 0 28 1034.334765613079 0 1034.334765613079 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 19967.9 0.449999988079071 4075 6031 10107 SUDHL4_400M_050219_2,10108 SUDHL4_400M_050219_2,10108, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10109 58.078 800.0 26599.0 25 0 3087.7 -1 0 53 1072.157031238079 0 1072.157031238079 PEAK CID FTMS 0 0 0 -1 0 2 6 N 1 -1 3.9794 0.0 0.0 0.18575 0.0 0.0 1134.1559681384645 891.0781344049436 2025.234102543408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 N 0.18575 - 2 + 1 2.017 19127.0 0.8899999856948853 4076 6031 10107 SUDHL4_400M_050219_2,10109 SUDHL4_400M_050219_2,10109, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10118 58.124 800.0 57059.0 25 0 3921.7 -1 0 99 957.6004622501296 0 957.6017944216728 PEAK CID FTMS 0 0 0 10117 37420.84375 0.4448760201316126 1 -0.0212249755859375 1 6 T{I|L}{I|L}S{I|L}N 6 -1 51.107 0.0 0.0 2.6713 0.0 0.0 986.6417071156905 282.1455172174438 1268.7872243331342 0.0 0.0 0.0 0.0 0 0.0 0.0 1.424742501084005 1.411954370472159 T{I|L}{I|L}S{I|L}N 2.6713 - 617 + 1 2.017 38092.4 0.8999999761581421 4077 6039 10117 SUDHL4_400M_050219_2,10118 SUDHL4_400M_050219_2,10118, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10119 58.127 178.0 398400.0 25 0 68346.0 23069 LSLMLVSTV 9 67 962.555888283929 961.548611817329 1 962.5565673708916 MULTI CID FTMS 0 0 0 10117 233237.046875 0.1897155039727575 -23 0.3041572570800781 2 Unmodified _LSLMLVSTV_ ENSG00000166926|ENST00000684409|MS4A6E 96.28474662873226 0.0124266067997264 6 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VS{I|L}{I|L}STV 9 4 + 81.794 0.0 0.0 8.5064 8.5064 88.178 0.0 0.0 0.0 6.237125054200234 14.973024840566469 6.237125054200234 3.667053245199625 0 0.0 1.5228787452803376 1.9731975075880328 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VS{I|L}{I|L}STV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VS{I|L}S{I|L}TV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VTV{I|L}STV;{[TV]|[{I|L}S]}{I|L}MV{I|L}STV;{[TV]|[{I|L}S]}{I|L}M{I|L}VSTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VT{I|L}VSTV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}S{I|L}STV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}TVSTV;{[TV]|[{I|L}S]}{I|L}MVS{I|L}TV;{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VTVS{I|L}TV 8.5064;8.1251;7.8578;7.8578;7.7841;7.7841;7.6468;7.5731;7.4764;7.4764 -;-;-;-;+;-;-;-;-;- + 963 1 2.017 55769.1 1.0 4078 6039 10117 SUDHL4_400M_050219_2,10119 SUDHL4_400M_050219_2,10119,LSLMLVSTV True False TVLPFVSTV 58.127482 962.556567370892 13754716.0 10117.0 ENST00000589179.5_1_12:53590293-53590665:-|nuORF;;nc|ENSG00000139626|P26010-2|ITGB7;;ENSG00000139626|ENST00000267082|ITGB7 5.355264981587728 1.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10123 58.143 283.0 465140.0 25 0 37454.0 + 11604 GLAATLYSL 9 116 908.5085924529216 907.5013159863216 1 908.508837878704 MULTI CID FTMS 0 0 0 10122 320628.375 0.5757348819278947 -11 0.0874290466308593 1 Unmodified _GLAATLYSL_ ENSG00000112972|ENST00000325110|HMGCS1;ENST00000508319.1_1_5:43294149-43294911:-|nuORF 71.13359017698441 0.0206607516130725 6 {[VA]|[{I|L}G]}AAT{I|L}YS{I|L} 9 0 + 76.834 0.0 0.0 8.4665 8.4665 87.678 0.0 0.0 0.0 3.260397417655639 14.973024840566469 3.260397417655639 3.260397417655639 0 1.2803695511246984 0.958607314841775 2.0 0.0 + + {[VA]|[{I|L}G]}AAT{I|L}YS{I|L};[{I|L}T]QA{I|L}YS{I|L};[Q{I|L}]AT{I|L}YS{I|L};[{I|L}T]AAG{I|L}YS{I|L};{[VA]|[{I|L}G]}AATY{I|L}S{I|L};{[VA]|[{I|L}G]}ATA{I|L}YS{I|L};[{I|L}T][AG]A{I|L}YS{I|L};[{I|L}T]QAY{I|L}S{I|L};[Q{I|L}]ATY{I|L}S{I|L};[Q{I|L}]TA{I|L}YS{I|L} 8.4665;8.1072;7.9238;7.3705;7.3554;7.1531;7.0866;6.9961;6.8127;6.6104 +;-;-;-;-;-;-;-;-;- + 4072 1 2.017 90132.3 1.0 4079 6042 10122 SUDHL4_400M_050219_2,10123 SUDHL4_400M_050219_2,10123,GLAATLYSL True True GLAATLYSL 58.14318 908.508837878704 2977413.5 10122.0 ENSG00000112972|ENST00000325110|HMGCS1;;ENST00000508319.1_1_5:43294149-43294911:-|nuORF 5.566427548726399 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10127 58.162 466.0 119740.0 25 0 7574.8 + 1785 ALSDYDLVL 9 73 1008.5244135002076 1007.5171370336076 1 1008.524218738079 MULTI CID FTMS 0 0 0 10126 108694.25 0.5851858581576034 5 -0.0484428405761718 1 Unmodified _ALSDYDLVL_ ENSG00000065135|ENST00000369851|GNAI3;ENSG00000127955|ENST00000649796|GNAI1;nc|ENSG00000127955|P63096-2|GNAI1 74.42276476219924 0.019389277360085 6 [{I|L}A]SDYD{I|L}V{I|L} 9 0 + 91.091 0.0 0.0 9.0411 9.0411 88.84 0.0 0.0 0.0 24.13734275855268 53.905979739538665 24.13734275855268 3.7628749457997657 0 0.2396518287104437 1.6989700043360187 1.885151878060192 0.0 + + [{I|L}A]SDYD{I|L}V{I|L};[{I|L}A]SDYDV{I|L}{I|L};[{I|L}A]DSYD{I|L}V{I|L};[{I|L}A]DSYDV{I|L}{I|L};[{I|L}A]DYSD{I|L}V{I|L};[{I|L}A]DYSDV{I|L}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}DS{I|L}A{I|L}V{I|L};{[YD]|[{M(Oxidation (M))|F}M]}DS{I|L}AV{I|L}{I|L};{[YD]|[{M(Oxidation (M))|F}M]}{I|L}DSA{I|L}V{I|L};{NN|[MP]|[D{I|L}]|[EV]}YDSA{I|L}V{I|L} 9.0411;8.6677;8.1095;7.736;7.5613;7.1878;6.5416;6.1681;6.1162;5.8174 +;-;-;-;-;-;-;-;-;- + 2137 1 2.017 43338.7 1.0 4080 6045 10126 SUDHL4_400M_050219_2,10127 SUDHL4_400M_050219_2,10127,ALSDYDLVL True True ALSDYDLVL 58.162082 1008.52421873808 862960.9375 10126.0 nc|ENSG00000127955|P63096-2|GNAI1;;ENSG00000127955|ENST00000649796|GNAI1;;ENSG00000065135|ENST00000369851|GNAI3 5.408885002136231 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10130 58.183 800.0 22388.0 25 0 4293.2 -1 0 41 1079.601123034954 0 1079.601123034954 PEAK CID FTMS 0 0 0 -1 0 1 6 C(Carbamidomethyl (C)) 1 -1 1.5938 0.0 0.0 0.073883 0.0 0.0 1295.7719959704957 698.3556612604124 1994.127657230908 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 C(Carbamidomethyl (C)) 0.073883 - 2 + 1 2.017 20718.3 0.9399999976158142 4081 6047 10129 SUDHL4_400M_050219_2,10130 SUDHL4_400M_050219_2,10130, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10131 58.192 514.0 148460.0 25 0 13091.0 + 37391 TLAETLVNL 9 82 973.55688971595 972.54961324935 1 973.555712878704 MULTI CID FTMS 0 0 0 10129 158296.484375 0.8318777557917507 -7 0.0386276245117187 2 Unmodified _TLAETLVNL_ ENSG00000139645|ENST00000267116|ANKRD52 96.11092074494114 0.0124975504059861 6 [{I|L}T]AET{I|L}VN{I|L} 9 0 + 93.47 0.0 0.0 9.6109 9.6109 87.473 0.0 0.0 0.0 14.828569748450915 14.09256854528806 14.09256854528806 2.5534255435383955 0 1.360924374808178 1.154901959985743 2.25 0.5 + + [{I|L}T]AET{I|L}VN{I|L};[{I|L}T]EAT{I|L}VN{I|L};[{I|L}T]AETV{I|L}N{I|L};[{I|L}T]EATV{I|L}N{I|L};[{I|L}T]AET{I|L}VGG{I|L};{[CP]|[EA]}T{I|L}T{I|L}VN{I|L};[{I|L}A]TET{I|L}VN{I|L};[{I|L}T]EAT{I|L}VGG{I|L};{[ET]|[MV]}A{I|L}T{I|L}VN{I|L};[{I|L}T]AEVT{I|L}N{I|L} 9.6109;9.3483;8.4599;8.1974;8.1499;8.0862;7.9328;7.8874;7.6482;7.5484 +;-;-;-;-;-;-;-;-;- + 3223 1 2.017 56675.3 1.0 4082 6047 10129 SUDHL4_400M_050219_2,10131 SUDHL4_400M_050219_2,10131,TLAETLVNL True True TLAETLVNL 58.191632 973.555712878704 1015971.0 10129.0 ENSG00000139645|ENST00000267116|ANKRD52 3.03714919090271 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10139 58.232 800.0 198430.0 25 0 11813.0 + 37508 TLGQIWDV 8 144 931.488509409573 930.481232942973 1 931.4898559451104 MULTI CID FTMS 0 0 0 10138 131901.25 0.7735380932012202 -10 0.0683517456054687 1 Unmodified _TLGQIWDV_ ENSG00000197102|ENST00000360184|DYNC1H1 78.7280429016045 0.0974402130616148 6 [{I|L}T]GQ{I|L}WDV 8 0 + 95.627 0.0 0.0 10.277 10.277 96.314 0.0 0.0 0.0 11.575221787320515 16.40978057358332 11.575221787320515 11.575221787320515 0 1.031234684152075 1.5228787452803376 1.8098943791441968 0.9291746928241126 + + [{I|L}T]GQ{I|L}WDV;[Q{I|L}]GT{I|L}WDV;{[QG]|[NA]}{I|L}T{I|L}WDV;[{I|L}T]GQW{I|L}DV;[{I|L}T]G[AG]{I|L}WDV;[Q{I|L}]GTW{I|L}DV;{[QG]|[NA]}{I|L}TW{I|L}DV;[{I|L}T]GQ{I|L}{[CT]|[{M(Oxidation (M))|F}G]}PV;[Q{I|L}]G{I|L}TWDV;[AG]G{I|L}T{I|L}WDV 10.277;9.0332;8.897;8.7385;8.2832;7.4945;7.3582;7.3489;7.3189;7.2067 +;-;-;-;-;-;-;-;-;- + 2668 1 2.017 100008.4 0.5 4083 6054 10138 SUDHL4_400M_050219_2,10139 SUDHL4_400M_050219_2,10139,TLGQIWDV True True TLGQIWDV 58.231952 931.48985594511 864622.0 10138.0 ENSG00000197102|ENST00000360184|DYNC1H1 6.996041774749756 1.0 True 8.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10143 58.253 617.0 19434.0 25 0 984.44 -1 0 36 1103.877978503704 0 1103.877978503704 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 19218.3 1.0 4084 6057 10142 SUDHL4_400M_050219_2,10143 SUDHL4_400M_050219_2,10143, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10146 58.267 366.0 18147.0 25 0 1395.2 -1 0 22 1113.2320042448007 0 1112.833666980267 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 16862.3 1.0 4085 6059 10145 SUDHL4_400M_050219_2,10146 SUDHL4_400M_050219_2,10146, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10154 58.307 800.0 13228.0 25 0 1107.8 -1 0 31 1169.500537097454 0 1169.500537097454 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 18093.8 0.4300000071525574 4086 6066 10153 SUDHL4_400M_050219_2,10154 SUDHL4_400M_050219_2,10154, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10155 58.321 800.0 16685.0 25 0 646.09 -1 0 38 1126.8279081891158 0 1126.789111316204 PEAK CID FTMS 0 0 0 -1 0 2 6 P{M(Oxidation (M))|F} 2 -1 6.1979 0.0 0.0 0.27526 0.0 0.0 1178.873759638194 825.6172579400999 2004.4910175782936 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 P{M(Oxidation (M))|F} 0.27526 - 4 + 1 2.017 19817.3 0.4300000071525574 4087 6066 10153 SUDHL4_400M_050219_2,10155 SUDHL4_400M_050219_2,10155, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10161 58.348 470.0 48559.0 25 0 4034.9 -1 0 57 927.8374204805616 0 927.6281616091728 PEAK CID FTMS 0 0 0 -1 0 1 6 {I|L} 1 -1 1.9897 0.0 0.0 0.10734 0.0 0.0 1582.2442551683514 155.3105410211547 1737.554796189506 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L} 0.10734 - 1 + 1 2.017 24054.6 1.0 4088 6071 10160 SUDHL4_400M_050219_2,10161 SUDHL4_400M_050219_2,10161, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10167 58.373 357.0 93677.0 25 0 1949.0 -1 0 75 948.1823391199492 0 948.0145751833916 PEAK CID FTMS 0 0 0 -1 0 1 6 Q 1 -1 6.9897 0.0 0.0 0.36898 0.0 0.0 1022.3053998201732 740.9716890924436 1763.2770889126168 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.36898 - 9 + 1 2.017 27857.1 1.0 4089 6076 10166 SUDHL4_400M_050219_2,10167 SUDHL4_400M_050219_2,10167, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10170 58.386 366.0 135460.0 25 0 6137.4 -1 0 109 915.261667682312 0 915.440478503704 PEAK CID FTMS 0 0 0 10169 20474.02734375 0.348354810008472 1 -0.0146408081054687 1 6 A 1 -1 5.4846 0.0 0.0 0.29995 0.0 0.0 1622.4026403189223 132.04599939517814 1754.4486397141004 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.29995 - 6 + 1 2.017 35432.5 1.0 4090 6078 10169 SUDHL4_400M_050219_2,10170 SUDHL4_400M_050219_2,10170, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10171 58.391 297.0 170970.0 25 0 9991.9 -1 0 88 964.5269423126524 0 964.5236694216728 PEAK CID FTMS 0 0 0 10169 153532.828125 1.0 0 0.0 2 6 VST{I|L}{M(Oxidation (M))|F}EV 7 -1 33.765 0.0 0.0 1.7522 0.0 0.0 981.5203020063612 167.08333765201408 1148.6036396583754 0.0 0.0 0.0 0.0 0 0.0 0.0 1.1861818737241734 0.0 VST{I|L}{M(Oxidation (M))|F}EV 1.7522 - 1009 + 1 2.017 39723.8 1.0 4091 6078 10169 SUDHL4_400M_050219_2,10171 SUDHL4_400M_050219_2,10171, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10175 58.405 164.0 581520.0 25 0 50167.0 + 37908 TLWVDPYEV 9 75 1121.5516626774922 1120.5443862108923 1 1123.556933581829 MULTI CID FTMS 0 0 0 10174 649515.4375 0.5444313415680633 19 -0.1780357360839843 1 Unmodified _TLWVDPYEV_ ENSG00000133639|ENST00000256015|BTG1;ENSG00000159388|ENST00000290551|BTG2 58.6788170122104 0.0268135626297836 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VDVGVEP 10 6 + 62.365 0.0 0.0 5.5656 5.5656 78.318 0.0 0.0 0.0 1.3196632743053769 9.075221787320515 1.3196632743053769 1.3196632743053769 0 1.2817183090963749 1.6989700043360187 1.3684151806525389 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VDVGVEP;[{I|L}T]WVDYVEP;[{I|L}T]WVDVYEP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VDVGEVP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}VDVG{I|L}DP;[{I|L}T]WVDY{I|L}DP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[KP]YVEP;[{I|L}T]WVDYEVP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}E[KP]VYEP;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[{M(Oxidation (M))|F}V]VGVEP 5.5656;5.4478;5.2907;4.7682;4.6708;4.553;4.4685;4.3927;4.3114;4.2725 -;-;-;-;-;-;-;-;-;- 1565 1 2.017 64942.4 1.0 4092 6081 10174 SUDHL4_400M_050219_2,10175 SUDHL4_400M_050219_2,10175,TLWVDPYEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10176 58.413 457.0 18408.0 25 0 1147.8 -1 0 29 1078.74499356595 0 1079.069140613079 PEAK CID FTMS 0 0 0 10174 44208.81640625 1.0 0 0.0 2 6 T 1 -1 1.1092 0.0 0.0 0.051462 0.0 0.0 1887.2038410363937 164.2026308649047 2051.4064719012986 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.051462 - 1 + 1 2.017 16860.3 1.0 4093 6081 10174 SUDHL4_400M_050219_2,10176 SUDHL4_400M_050219_2,10176, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10179 58.429 551.0 30820.0 25 0 1257.3 -1 0 52 1019.180428199998 0 1018.830615222454 PEAK CID FTMS 0 0 0 10178 16562.91796875 1.0 0 0.0 1 6 AA{I|L} 3 -1 9.0411 0.0 0.0 0.44398 0.0 0.0 1426.0468782732394 352.11628137760005 1778.1631596508394 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 AA{I|L} 0.44398 - 11 + 1 2.017 21996.3 1.0 4094 6083 10178 SUDHL4_400M_050219_2,10179 SUDHL4_400M_050219_2,10179, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10180 58.443 800.0 75788.0 25 0 1977.8 -1 0 93 1057.999938303513 0 1058.077685534954 PEAK CID FTMS 0 0 0 -1 0 2 6 MVQ{I|L} 4 -1 15.918 0.0 0.0 0.75297 0.0 0.0 1187.4930884216762 452.2154635065063 1639.7085519281825 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 MVQ{I|L} 0.75297 - 35 + 1 2.017 42710.1 0.449999988079071 4095 6083 10178 SUDHL4_400M_050219_2,10180 SUDHL4_400M_050219_2,10180, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10189 58.479 249.0 279670.0 25 0 45331.0 + 23070 LSLMLVSTV 9 73 962.555888283929 961.548611817329 1 962.5560790896416 MULTI CID FTMS 0 0 0 10188 228736.203125 0.1860545082099724 29 -0.2622795104980469 1 Unmodified _LSLMLVSTV_ ENSG00000166926|ENST00000684409|MS4A6E 78.14939416004806 0.0179651292570206 6 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VS{I|L}{I|L}S{[TV]|[{I|L}S]} 9 4 + 65.697 0.0 0.0 6.8324 6.8324 85.202 0.0 0.0 0.0 6.332946754800375 5.642492736872597 5.642492736872597 3.667053245199625 0 0.0 1.5228787452803376 1.4604093769761874 0.0 {[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VS{I|L}{I|L}S{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VS{I|L}S{I|L}{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}MV{I|L}S{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}S{I|L}S{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VTV{I|L}S{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}M{I|L}VS{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}V{I|L}TVS{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VT{I|L}VS{[TV]|[{I|L}S]};{[TV]|[{I|L}S]}{I|L}MVS{I|L}{[TV]|[{I|L}S]};{[ED]|[{M(Oxidation (M))|F}P]|[M{I|L}]}VSTV{I|L}{[TV]|[{I|L}S]} 6.8324;6.451;6.1737;6.1234;6.073;6.0676;6.0172;5.9668;5.7924;5.7672 -;-;-;-;-;+;-;-;-;- + 970 1 2.017 54022.7 1.0 4096 6091 10188 SUDHL4_400M_050219_2,10189 SUDHL4_400M_050219_2,10189,LSLMLVSTV True False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10190 58.492 800.0 11386.0 25 0 644.55 -1 0 26 1090.735849683933 0 1090.942309558392 PEAK CID FTMS 0 0 0 10188 14338.5546875 1.0 0 0.0 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 18078.0 0.4300000071525574 4097 6091 10188 SUDHL4_400M_050219_2,10190 SUDHL4_400M_050219_2,10190, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10191 58.506 800.0 11335.0 25 0 601.5 -1 0 30 1024.872373455011 0 1025.117236316204 PEAK CID FTMS 0 0 0 10188 22571.42578125 1.0 0 0.0 3 6 {M(Oxidation (M))|F} 1 -1 3.0989 0.0 0.0 0.15134 0.0 0.0 1524.711835677797 372.9155367486938 1897.6273724264904 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F} 0.15134 - 1 + 1 2.017 17242.0 0.4099999964237213 4098 6091 10188 SUDHL4_400M_050219_2,10191 SUDHL4_400M_050219_2,10191, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10194 58.527 800.0 227350.0 25 0 6731.2 -1 0 126 872.4175858480659 3485.641237525864 4 872.9211303591728 MULTI CID FTMS 0 0 0 10193 80368.65625 0.2843930427459232 -14 0.1191596984863281 1 6 [YQ]{I|L} 3 -1 28.217 0.0 0.0 0.80953 0.0 0.0 0.0 3078.411272449008 3078.411272449008 5.169752687851531 0.0 0.0 0.0 0 0.5 1.0457574905606752 0.0 0.3807196863200844 [YQ]{I|L} 0.80953 - 522 1 2.017 117152.6 0.3100000023841858 4099 6093 10193 SUDHL4_400M_050219_2,10194 SUDHL4_400M_050219_2,10194, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10195 58.54 800.0 12315.0 25 0 702.96 -1 0 30 1171.102465808392 0 1171.102465808392 PEAK CID FTMS 0 0 0 -1 0 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 19977.7 0.4099999964237213 4100 6093 10193 SUDHL4_400M_050219_2,10195 SUDHL4_400M_050219_2,10195, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10199 58.565 800.0 17410.0 25 0 697.84 -1 0 40 1130.5591973783803 0 1130.558154284954 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 17563.8 0.3799999952316284 4101 6096 10198 SUDHL4_400M_050219_2,10199 SUDHL4_400M_050219_2,10199, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10205 58.597 786.0 114810.0 25 0 7783.7 + -1 ALVESLITV 9 113 944.5653470266788 0 944.5634643435478 PEAK CID FTMS 0 0 0 10204 73334.1328125 0.8463925989544941 -7 0.0407943725585937 1 ENSG00000196233|ENST00000421806|LCOR 6 CPT{I|L}{I|L}DTV 8 -1 48.001 0.0 0.0 2.5436 0.0 0.0 860.5638472742577 181.0989168756469 1041.662764149905 0.0 0.0 0.0 0.0 0 0.0 0.0 2.1861818737241734 0.0 CPT{I|L}{I|L}DTV 2.5436 - 6505 + 1 2.017 63266.2 1.0 4102 6101 10204 SUDHL4_400M_050219_2,10205 SUDHL4_400M_050219_2,10205, False False ALVESLITV 58.597398 944.563464343548 578969.875 10204.0 ENSG00000196233|ENST00000421806|LCOR 3.9681272506713863 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10208 58.618 800.0 74269.0 25 0 5310.9 -1 0 75 1162.888346775145 3485.6432109256352 3 1163.216357409954 MULTI CID FTMS 0 0 0 10207 60006.1953125 0.507020987577552 -5 0.0322456359863281 1 6 [H{I|L}]VEA{I|L}Y 7 -1 40.706 0.0 0.0 1.1678 0.0 0.0 0.0 2657.182139288673 2657.182139288673 33.71600731282193 0.0 0.0 0.0 0 1.5 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y 1.1678 - 47 1 2.017 45616.2 0.3899999856948852 4103 6103 10207 SUDHL4_400M_050219_2,10208 SUDHL4_400M_050219_2,10208, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10211 58.632 438.0 310740.0 25 0 48059.0 + 37909 TLWVDPYEV 9 86 1121.5516626774922 1120.5443862108923 1 1121.554003894329 MULTI CID FTMS 0 0 0 10210 278447.78125 0.0563659704416884 43 -0.3233680725097656 1 Unmodified _TLWVDPYEV_ ENSG00000133639|ENST00000256015|BTG1;ENSG00000159388|ENST00000290551|BTG2 123.45060196383646 0.000255189003501 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DVPGEV 10 4 + 87.215 0.0 0.0 7.7833 7.7833 90.448 0.0 0.0 0.0 9.982653242032455 9.982653242032455 9.982653242032455 7.711440694835829 0 1.6307196863200843 1.5228787452803376 1.5044321917401078 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DVPGEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DVPADV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DV{[DA]|[EG]}PV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DV[VS]PV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DPVGEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DPGVEV;[{I|L}T]WVDPYEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DVPSVV;[{I|L}T][YE]DVWPV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DPAVDV 7.7833;7.0951;7.0337;7.0337;6.9113;6.9113;6.8924;6.826;6.6728;6.6489 -;-;-;-;-;-;+;-;-;- + 7468 1 2.017 89017.8 1.0 4104 6105 10210 SUDHL4_400M_050219_2,10211 SUDHL4_400M_050219_2,10211,TLWVDPYEV True True TLWVDPYEV 58.632137 1121.55400389433 63228976.0 10210.0 ENSG00000159388|ENST00000290551|BTG2;;ENSG00000133639|ENST00000256015|BTG1 8.55817953745524 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10212 58.646 800.0 46723.0 25 0 6248.5 + 40908 VLSDIIQNL 9 74 507.7956978557924 1013.5768427783848 2 507.7951537966728 MULTI CID FTMS 0 0 0 10210 87531.5234375 0.6955366230796756 -18 0.1664962768554687 2 Unmodified _VLSDIIQNL_ ENSG00000123338|ENST00000293373|NCKAP1L;nc|ENSG00000123338|P55160-2|NCKAP1L 30.22481116460888 0.1466181017706357 6 {NN|[MP]|[D{I|L}]|[EV]}SV{I|L} 5 6 32.14 0.0 0.0 3.1709 0.0 0.0 0.0 483.2581531634035 483.2581531634035 10.885292544721407 0.0 0.0 0.0 0 0.0 1.0 0.3054621874040891 0.2887254899964357 {NN|[MP]|[D{I|L}]|[EV]}SV{I|L} 3.1709 - 77 1 2.017 35388.9 0.3199999928474426 4105 6105 10210 SUDHL4_400M_050219_2,10212 SUDHL4_400M_050219_2,10212,VLSDIIQNL False True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10221 58.691 800.0 36558.0 25 0 2182.5 -1 0 69 941.8228637576104 0 941.8228637576104 PEAK CID FTMS 0 0 0 -1 0 1 6 Q 1 -1 3.4949 0.0 0.0 0.18574 0.0 0.0 1231.3046497790892 519.2458590143186 1750.550508793408 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.18574 - 3 + 1 2.017 27177.9 0.3799999952316284 4106 6113 10220 SUDHL4_400M_050219_2,10221 SUDHL4_400M_050219_2,10221, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10222 58.7 536.0 22882.0 25 0 1621.0 -1 0 38 1001.8627795029448 0 1001.538561999798 PEAK CID FTMS 0 0 0 -1 0 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 19959.3 1.0 4107 6113 10220 SUDHL4_400M_050219_2,10222 SUDHL4_400M_050219_2,10222, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10225 58.713 362.0 69816.0 25 0 3470.7 -1 0 68 948.5447334685044 0 948.9496337771416 PEAK CID FTMS 0 0 0 -1 0 1 6 G 1 -1 7.8811 0.0 0.0 0.41587 0.0 0.0 801.3712529704086 1033.6681612604127 1835.0394142308207 0.0 0.0 0.0 0.0 0 0.2396518287104437 0.0 0.0 0.0 G 0.41587 - 6 + 1 2.017 25755.5 1.0 4108 6115 10224 SUDHL4_400M_050219_2,10225 SUDHL4_400M_050219_2,10225, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10230 58.734 309.0 48257.0 25 0 3854.2 -1 0 40 970.3357421755792 0 970.3357421755792 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 18317.5 1.0 4109 6119 10229 SUDHL4_400M_050219_2,10230 SUDHL4_400M_050219_2,10230, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10236 58.759 400.0 271040.0 25 0 57274.0 + 26018 NLYPETFAL 9 94 1067.54108406959 1066.53380760299 1 1067.541674792767 MULTI CID FTMS 0 0 0 10235 299573.25 0.8613954320903122 11 -0.1101303100585937 1 Unmodified _NLYPETFAL_ ENSG00000118816|ENST00000237654|CCNI;nc|ENSG00000118816|Q14094-2|CCNI 96.11092074494114 0.0124975504059861 6 {[QV]|[N{I|L}]|[RA]|[KV]}Y[EP]T{M(Oxidation (M))|F}A{I|L} 9 0 + 81.287 0.0 0.0 7.6216 7.6216 84.1 0.0 0.0 0.0 1.6405014442981385 14.973024840566469 1.6405014442981385 1.6405014442981385 0 1.674742501084005 1.5228787452803376 0.9802046884880936 1.4436726795685342 + + {[QV]|[N{I|L}]|[RA]|[KV]}Y[EP]T{M(Oxidation (M))|F}A{I|L};[EP]T{M(Oxidation (M))|F}AAT{M(Oxidation (M))|F}A{I|L};[EP]T{M(Oxidation (M))|F}A{I|L}NY{I|L};[EP]{M(Oxidation (M))|F}TAAT{M(Oxidation (M))|F}A{I|L};[EP]T{M(Oxidation (M))|F}{[QD]|[EN]|[WG]|[KD]|[RS]}{M(Oxidation (M))|F}A{I|L};[EP]T{M(Oxidation (M))|F}Y{I|L}NA{I|L};[EP]{M(Oxidation (M))|F}TA{I|L}NY{I|L};[EP]T{M(Oxidation (M))|F}A[VG]YA{I|L};[EP]T{M(Oxidation (M))|F}AA[VG]Y{I|L};[EP]T{M(Oxidation (M))|F}AY[VG]A{I|L} 7.6216;7.4678;7.091;6.2228;6.1974;6.1628;5.846;5.6679;5.635;5.543 +;-;-;-;-;-;-;-;-;- + 3791 1 2.017 76014.9 1.0 4110 6124 10235 SUDHL4_400M_050219_2,10236 SUDHL4_400M_050219_2,10236,NLYPETFAL True True NLYPETFAL 58.759464 1067.54167479277 1964158.0 10235.0 ENSG00000118816|ENST00000237654|CCNI;;nc|ENSG00000118816|Q14094-2|CCNI 7.055517514546712 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10237 58.769 518.0 163900.0 25 0 11022.0 + 9703 FLSSVIQNL 9 101 1020.5716597735152 1019.564383306915 1 1020.572558581829 MULTI CID FTMS 0 0 0 10235 257972.90625 1.0 0 0.0 2 Unmodified _FLSSVIQNL_ ENSG00000173692|ENST00000308696|PSMD1;nc|ENSG00000173692|Q99460-2|PSMD1 78.06048673739656 0.0179866705178931 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSV{I|L}QN{I|L} 9 0 + 63.969 0.0 0.0 6.2741 6.2741 82.33 0.0 0.0 0.0 2.680854553793296 11.165827977365623 2.680854553793296 2.680854553793296 0 1.555462187404089 0.0 1.805462187404089 0.3807196863200844 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSV{I|L}QN{I|L};{[TV]|[{I|L}S]}VS{M(Oxidation (M))|F}{I|L}QN{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}SV{I|L}QN{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSV{I|L}QGG{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSV{I|L}[AG]N{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}SSVQ{I|L}N{I|L};{[TV]|[{I|L}S]}VS{M(Oxidation (M))|F}{I|L}[AG]N{I|L};{[TV]|[{I|L}S]}VS{M(Oxidation (M))|F}{I|L}QGG{I|L};{[TV]|[{I|L}S]}VS{M(Oxidation (M))|F}Q{I|L}N{I|L};{[TV]|[{I|L}S]}{M(Oxidation (M))|F}SV{I|L}QGG{I|L} 6.2741;6.0112;5.8838;5.371;5.371;5.2813;5.1081;5.1081;5.0183;4.9807 +;-;-;-;-;-;-;-;-;- + 3081 1 2.017 58689.2 1.0 4111 6124 10235 SUDHL4_400M_050219_2,10237 SUDHL4_400M_050219_2,10237,FLSSVIQNL True True FLSSVIQNL 58.768624 1020.57255858183 1194897.0 10235.0 ENSG00000173692|ENST00000308696|PSMD1;;nc|ENSG00000173692|Q99460-2|PSMD1 2.389933556318283 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10239 58.776 283.0 373900.0 25 0 20111.0 -1 0 121 872.4175858480659 3485.641237525864 4 872.6690551638603 MULTI CID FTMS 0 0 0 10238 186387.84375 0.589993124145526 11 -0.0952873229980468 1 6 [H{I|L}]VEA{I|L}Y{I|L} 8 -1 34.602 0.0 0.0 0.9927 0.0 0.0 0.0 2544.0977723313813 2544.0977723313813 0.9176003468814996 0.0 0.0 0.0 0 0.4247425010840047 0.0 0.0 0.0 [H{I|L}]VEA{I|L}Y{I|L} 0.9927 - 542 1 2.017 78478.7 1.0 4112 6125 10238 SUDHL4_400M_050219_2,10239 SUDHL4_400M_050219_2,10239, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10242 58.793 596.0 20093.0 25 0 1458.4 -1 0 38 981.734852456694 0 981.7589599490166 PEAK CID FTMS 0 0 0 -1 0 1 6 A 1 -1 5.4846 0.0 0.0 0.27962 0.0 0.0 1755.3488420210065 132.04615198306877 1887.3949940040752 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 A 0.27962 - 2 + 1 2.017 19628.0 1.0 4113 6127 10241 SUDHL4_400M_050219_2,10242 SUDHL4_400M_050219_2,10242, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10245 58.814 800.0 20961.0 25 0 5038.4 -1 0 37 1036.590380847454 0 1036.590380847454 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 20875.2 0.6700000166893005 4114 6129 10244 SUDHL4_400M_050219_2,10245 SUDHL4_400M_050219_2,10245, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10248 58.834 800.0 268210.0 25 0 19264.0 + 40730 VLIDDLTTL 9 96 1002.5716854280064 1001.5644089614062 1 1002.571215808392 MULTI CID FTMS 0 0 0 10247 298935.8125 0.3892810297717431 -18 0.1437759399414062 1 Unmodified _VLIDDLTTL_ ENSG00000135297|ENST00000498286|MTO1;ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1 104.79918948944588 0.0084531067040494 6 [{I|L}V]DEV{I|L}TT{I|L} 9 3 + 88.159 0.0 0.0 8.8021 8.8021 83.938 0.0 0.0 0.0 9.075221787320515 14.09256854528806 9.075221787320515 0.5102999566398125 0 1.0356668758921828 1.6989700043360187 1.6989700043360187 0.0 [{I|L}V]DEV{I|L}TT{I|L};[{I|L}V]DD{I|L}{I|L}TT{I|L};[{I|L}V]EDV{I|L}TT{I|L};[{I|L}V]{I|L}DD{I|L}TT{I|L};[{I|L}V]D{I|L}D{I|L}TT{I|L};[{I|L}V]EVD{I|L}TT{I|L};[{I|L}V]DEVT{I|L}T{I|L};[{I|L}V]DD{I|L}T{I|L}T{I|L};[{I|L}V]EDVT{I|L}T{I|L};[{I|L}V]DE{I|L}VTT{I|L} 8.8021;8.7511;8.7053;8.5015;8.201;8.1042;8.0959;8.0449;7.9991;7.9016 -;-;-;+;-;-;-;-;-;- + 11491 1 2.017 141377.2 0.7099999785423279 4115 6131 10247 SUDHL4_400M_050219_2,10248 SUDHL4_400M_050219_2,10248,VLIDDLTTL True True VLIDDLTTL 58.834403 1002.57121580839 8492184.0 10247.0 nc|ENSG00000135297|Q9Y2Z2-6|MTO1;;ENSG00000135297|ENST00000498286|MTO1;;ENST00000370308.8_1_6:74189644-74210455:+|nuORF;;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;;nc|ENSG00000135297|Q9Y2Z2|MTO1;;nc|ENSG00000135297|Q9Y2Z2-5|MTO1 3.7792197863260895 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10249 58.848 769.0 66387.0 25 0 5591.4 + 18882 LATDFIQSL 9 68 1007.5400152790368 1006.5327388124368 1 1007.539294421673 MULTI CID FTMS 0 0 0 10247 126400.8046875 0.438661642608645 19 -0.1350822448730468 2 Unmodified _LATDFIQSL_ ENSG00000081320|ENST00000263955|STK17B 92.65332237495696 0.0139087009896299 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DTA{I|L}QS{I|L} 9 4 + 73.699 0.0 0.0 7.3221 7.3221 81.33 0.0 0.0 0.0 0.1006579500431428 16.478174818886373 0.1006579500431428 0.1006579500431428 0 0.6989700043360187 0.0 1.9876954943324543 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DTA{I|L}QS{I|L};[{I|L}A]TD{M(Oxidation (M))|F}{I|L}QS{I|L};{[{M(Oxidation (M))|F}D]|MM}{I|L}TA{I|L}QS{I|L};{[{M(Oxidation (M))|F}D]|MM}T{I|L}A{I|L}QS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DAT{I|L}QS{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DTA{I|L}SQ{I|L};{[{M(Oxidation (M))|F}D]|MM}{I|L}AT{I|L}QS{I|L};{[{M(Oxidation (M))|F}D]|MM}TA{I|L}{I|L}QS{I|L};[{I|L}A]TD{M(Oxidation (M))|F}{I|L}SQ{I|L};{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}DTA{I|L}[AG]S{I|L} 7.3221;7.3121;7.1472;6.9267;6.6399;6.4742;6.4649;6.4649;6.4642;6.4073 -;+;-;-;-;-;-;-;-;- + 2010 1 2.017 41559.8 1.0 4116 6131 10247 SUDHL4_400M_050219_2,10249 SUDHL4_400M_050219_2,10249,LATDFIQSL True True LATDFIQSL 58.847742 1007.53929442167 1627017.0 10247.0 ENSG00000081320|ENST00000263955|STK17B 3.9312358697255454 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10257 58.883 455.0 25001.0 25 0 4638.2 20281 LLDSSQKNL 9 27 1017.5599208339868 1016.5526443673868 1 1017.338183581829 MULTI CID FTMS 0 0 0 -1 0 1 Unmodified _LLDSSQKNL_ ENSG00000188295|ENST00000448299|ZNF669;nc|ENSG00000188295|Q96BR6|ZNF669 2.9952420565917617 0.8101217823238775 6 {I|L}{I|L}{M(Oxidation (M))|F} 3 7 10.458 0.0 0.0 1.0287 0.0 0.0 0.0 640.2962130182249 640.2962130182249 10.45757490560675 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L}{M(Oxidation (M))|F} 1.0287 - 2 + 1 2.017 18540.5 1.0 4117 6138 10256 SUDHL4_400M_050219_2,10257 SUDHL4_400M_050219_2,10257,LLDSSQKNL False False False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10258 58.896 800.0 19288.0 25 0 1965.6 -1 0 41 1163.8951665268464 0 1163.995288074017 PEAK CID FTMS 0 0 0 10256 30870.53125 0.4746602885768515 -3 0.01202392578125 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 22191.6 0.3799999952316284 4118 6138 10256 SUDHL4_400M_050219_2,10258 SUDHL4_400M_050219_2,10258, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10262 58.921 800.0 142760.0 25 0 35152.0 -1 0 53 1030.5174877581278 0 1030.517382800579 PEAK CID FTMS 0 0 0 10261 151505.140625 0.9852735260621204 1 -0.0164031982421875 1 6 {I|L}{I|L}ATVP 6 -1 38.136 0.0 0.0 1.8521 0.0 0.0 1047.5219110153173 414.1034683734606 1461.625379388778 0.0 0.0 0.0 0.0 0 0.0 0.0 0.8494850021680094 0.0 {I|L}{I|L}ATVP 1.8521 - 108 + 1 2.017 80591.0 0.4900000095367431 4119 6141 10261 SUDHL4_400M_050219_2,10262 SUDHL4_400M_050219_2,10262, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10274 58.978 800.0 54153.0 25 0 10192.0 + 37910 TLWVDPYEV 9 45 1121.5505075665965 1120.5432310999963 1 1121.553027331829 MULTI CID FTMS 0 0 0 10273 29989.611328125 0.320392016069887 1 -0.0164031982421875 1 Unmodified _TLWVDPYEV_ ENSG00000133639|ENST00000256015|BTG1;ENSG00000159388|ENST00000290551|BTG2 71.92227651296345 0.0203558744033348 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DVWPV 9 5 + 79.231 0.0 0.0 7.0707 7.0707 89.749 0.0 0.0 0.0 20.0 16.478174818886373 16.478174818886373 8.965912507003608 0 1.305462187404089 1.6989700043360187 0.7302046884880937 0.0 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DVWPV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DV[PG]EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]DV{[DA]|[EG]}PV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[{M(Oxidation (M))|F}V]VWPV;[YE][{I|L}T]DVWPV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[{M(Oxidation (M))|F}V]D[RP]EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[{M(Oxidation (M))|F}V]V[PG]EV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}D[{M(Oxidation (M))|F}V]V{[DA]|[EG]}PV;[{I|L}T]WVDPYEV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}EV[MT]WPV 7.0707;6.2706;6.249;5.8425;5.2859;5.2414;5.0424;5.0207;4.8601;4.7372 -;-;-;-;-;-;-;-;+;- + 529 1 2.017 35324.9 0.3899999856948852 4120 6152 10273 SUDHL4_400M_050219_2,10274 SUDHL4_400M_050219_2,10274,TLWVDPYEV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10283 59.016 462.0 330910.0 25 0 19702.0 + + 37152 TLDDLIAAV 9 115 930.5282402893316 929.5209638227316 1 930.5135986208916 MULTI CID FTMS 0 0 0 10282 308609.40625 0.3854759334309224 -44 0.2924575805664062 1 Unmodified _TIAAATAAAAV_ ENST00000462121.1_1_5:139876268-139877642:+|nuORF;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1 47.74868867922204 0.1300977870992118 6 [{I|L}T]DD{I|L}{I|L}AAV 9 -1 + 78.087 0.0 0.0 8.4008 8.4008 84.576 0.0 0.0 0.0 1.249387366082999 14.973024840566469 1.249387366082999 1.249387366082999 0 0.0 1.5228787452803376 2.3807196863200843 0.0 [{I|L}T]DD{I|L}{I|L}AAV;{NN|[MP]|[D{I|L}]|[EV]}DT{I|L}{I|L}AAV;[{I|L}T]DD{I|L}A{I|L}AV;{NN|[MP]|[D{I|L}]|[EV]}DT{I|L}A{I|L}AV;{NN|[MP]|[D{I|L}]|[EV]}D{I|L}T{I|L}AAV;{NN|[MP]|[D{I|L}]|[EV]}TD{I|L}{I|L}AAV;[{I|L}T]DD{I|L}AA{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}{I|L}DT{I|L}AAV;{NN|[MP]|[D{I|L}]|[EV]}DT{I|L}AA{I|L}V;{NN|[MP]|[D{I|L}]|[EV]}D{I|L}TA{I|L}AV 8.4008;8.2664;7.996;7.8616;7.828;7.7531;7.5954;7.5041;7.461;7.4232 -;-;-;-;-;-;-;-;-;- 5738 1 2.017 102798.3 1.0 4121 6160 10282 SUDHL4_400M_050219_2,10283 SUDHL4_400M_050219_2,10283,TIAAATAAAAV False False TLDDLIAAV 59.016437 930.513598620892 1766321.75 10282.0 ENST00000462121.1_1_5:139876268-139877642:+|nuORF;;nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;;ENSG00000131503|ENST00000360839|ANKHD1;;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1 5.379218737284343 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10284 59.03 800.0 13026.0 25 0 607.18 -1 0 32 1127.838061511517 0 1127.838061511517 PEAK CID FTMS 0 0 0 -1 0 2 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 15158.8 0.3799999952316284 4122 6160 10282 SUDHL4_400M_050219_2,10284 SUDHL4_400M_050219_2,10284, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10288 59.049 480.0 12347.0 25 0 964.44 -1 0 19 1172.826953113079 0 1172.826953113079 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 13678.9 1.0 4123 6163 10287 SUDHL4_400M_050219_2,10288 SUDHL4_400M_050219_2,10288, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10289 59.058 474.0 96836.0 25 0 33981.0 + 14830 ILFPGGSVDL 10 35 1017.5599208339868 1016.5526443673868 1 1017.561572253704 MULTI CID FTMS 0 0 0 10287 68742.4296875 0.475574248882872 -22 0.1337203979492187 2 Unmodified _ILFPGGSVDL_ ENSG00000137563|ENST00000260118|GGH;ENST00000518966.5_1_8:63939670-63951327:-|nuORF;ENST00000520609.5_1_8:63936629-63951327:-|nuORF 46.020951573049366 0.1035046897853725 6 {I|L}{I|L}{M(Oxidation (M))|F}[NP]SVD{I|L} 9 2 + 47.954 0.0 0.0 4.7173 4.7173 88.581 0.0 0.0 0.0 7.147642715192504 31.7563686351756 7.147642715192504 47.95425621805954 0 1.0 0.0 0.6861818737241735 0.0 {I|L}{I|L}{M(Oxidation (M))|F}[NP]SVD{I|L} 4.7173 - 56 1 2.017 42072.2 1.0 4124 6163 10287 SUDHL4_400M_050219_2,10289 SUDHL4_400M_050219_2,10289,ILFPGGSVDL True True ILFPGGSVDL 59.05776 1017.5615722537 982569.0625 10287.0 ENST00000518966.5_1_8:63939670-63951327:-|nuORF;;ENST00000520609.5_1_8:63936629-63951327:-|nuORF;;ENSG00000137563|ENST00000260118|GGH 5.142341613769531 1.0 True 10.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10295 59.081 255.0 262390.0 25 0 20790.0 + 40731 VLIDDLTTL 9 77 1002.5716854280064 1001.5644089614062 1 1002.566699206829 MULTI CID FTMS 0 0 0 10294 355207.78125 0.4625596702902101 19 -0.1070060729980468 1 Unmodified _VLIDDLTTL_ ENSG00000135297|ENST00000498286|MTO1;ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1 64.23631603340823 0.0237365939569086 6 [{I|L}V]DEVT{I|L}T{I|L} 9 4 + 84.795 0.0 0.0 8.4663 8.4663 84.022 0.0 0.0 0.0 19.87695494332455 14.09256854528806 14.09256854528806 0.796896906561031 0 0.5941876774005248 1.6989700043360187 1.9802046884880933 0.0 [{I|L}V]DEVT{I|L}T{I|L};[{I|L}V]DEV{I|L}TT{I|L};[{I|L}V]EDVT{I|L}T{I|L};[{I|L}V]DD{I|L}T{I|L}T{I|L};[{I|L}V]EDV{I|L}TT{I|L};[{I|L}V]DD{I|L}{I|L}TT{I|L};[{I|L}V]{I|L}DDT{I|L}T{I|L};[{I|L}V]{I|L}DD{I|L}TT{I|L};[{I|L}V]DEVTT{I|L}{I|L};[{I|L}V]D{I|L}DT{I|L}T{I|L} 8.4663;8.3867;8.2448;8.2211;8.1652;8.1415;7.7914;7.7118;7.6449;7.6155 -;-;-;-;-;-;-;+;-;- + 4086 1 2.017 51055.4 1.0 4125 6168 10294 SUDHL4_400M_050219_2,10295 SUDHL4_400M_050219_2,10295,VLIDDLTTL True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10298 59.098 565.0 87932.0 25 0 4930.7 -1 0 85 872.4175858480659 3485.641237525864 4 872.9210082888603 MULTI CID FTMS 0 0 0 10297 13038.8564453125 0.0461393810899969 61 -0.3730888366699219 1 6 [H{I|L}]V{[CP]|[EA]}{I|L}Y{I|L}{M(Oxidation (M))|F} 9 -1 19.359 0.0 0.0 0.55538 0.0 0.0 0.0 2397.040626524163 2397.040626524163 12.368800006334345 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 [H{I|L}]V{[CP]|[EA]}{I|L}Y{I|L}{M(Oxidation (M))|F} 0.55538 - 33 1 2.017 40310.1 1.0 4126 6170 10297 SUDHL4_400M_050219_2,10298 SUDHL4_400M_050219_2,10298, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10303 59.126 800.0 12452.0 25 0 748.84 -1 0 34 1000.044848620892 0 1000.044848620892 PEAK CID FTMS 0 0 0 -1 0 1 6 T 1 -1 1.5938 0.0 0.0 0.079766 0.0 0.0 1179.5117420642464 714.4953096979124 1894.0070517621589 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 T 0.079766 - 1 + 1 2.017 19430.5 0.3799999952316284 4127 6174 10302 SUDHL4_400M_050219_2,10303 SUDHL4_400M_050219_2,10303, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10309 59.153 455.0 129920.0 25 0 23964.0 -1 0 50 1005.538438301777 0 1005.542468249798 PEAK CID FTMS 0 0 0 10308 137545.875 0.8055110791291596 -7 0.0406303405761718 1 6 {M(Oxidation (M))|F}PY 3 -1 16.198 0.0 0.0 0.80624 0.0 0.0 1231.6557505879423 367.1990665009108 1598.854817088853 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}PY 0.80624 - 111 + 1 2.017 47803.3 1.0 4128 6179 10308 SUDHL4_400M_050219_2,10309 SUDHL4_400M_050219_2,10309, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10322 59.214 800.0 57931.0 25 0 6238.3 + 12120 GQIPEVIFY 9 46 1065.5619568339675 1064.5546803673676 1 1065.560107409954 MULTI CID FTMS 0 0 0 10321 63559.43359375 0.5331098065221295 23 -0.1384124755859375 1 Unmodified _GQIPEVIFY_ ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000133243|Q9BX70-2|BTBD2 38.17557092003332 0.0854718145212029 6 [EP]V{I|L}{[QG]|[NA]}{I|L}{M(Oxidation (M))|F}Y 9 6 + 49.429 0.0 0.0 4.6431 4.6431 73.199 0.0 0.0 0.0 7.147642715192504 29.19978440589176 7.147642715192504 0.1230450566754512 0 0.3807196863200844 0.0 0.0 0.6747425010840047 [EP]V{I|L}{[QG]|[NA]}{I|L}{M(Oxidation (M))|F}Y;[EP]V[QA]V{I|L}{M(Oxidation (M))|F}Y;[EP]V{[QG]|[NA]}{I|L}{I|L}{M(Oxidation (M))|F}Y;[EP]V{I|L}{[QG]|[NA]}{M(Oxidation (M))|F}{I|L}Y;[EP]V[QA]V{M(Oxidation (M))|F}{I|L}Y;[EP]V{I|L}{I|L}{[QG]|[NA]}{M(Oxidation (M))|F}Y;[EP]V{[QG]|[NA]}{I|L}{M(Oxidation (M))|F}{I|L}Y;[EP]V{I|L}{M(Oxidation (M))|F}{[QG]|[NA]}{I|L}Y;[EP]V[KS][VP]{M(Oxidation (M))|F}Y;[EP]V[KS]{[ET]|[MV]}{I|L}Y 4.6431;4.6316;4.1949;3.7918;3.7802;3.5437;3.3436;3.2035;2.4641;1.6128 -;-;-;-;-;-;-;-;-;- 166 1 2.017 40741.5 0.3700000047683716 4129 6191 10321 SUDHL4_400M_050219_2,10322 SUDHL4_400M_050219_2,10322,GQIPEVIFY True False GQIPEVIFY 59.213703 1065.56010740995 824933.625 10321.0 ENST00000589685.2_1_19:1986489-1990887:-|nuORF;;nc|ENSG00000133243|Q9BX70-2|BTBD2;;ENSG00000133243|ENST00000255608|BTBD2 7.439778486887614 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10329 59.243 340.0 169220.0 25 0 25474.0 + + 35873 SVIIWTGR 8 64 930.5282402893316 929.5209638227316 1 932.5348388552666 MULTI CID FTMS 0 0 0 10328 109336.6875 0.7192902927776658 -9 0.0487747192382812 1 Unmodified _SVLLVTNGGA_ ENST00000372059.6_1_X:109445739-109459771:-|nuORF 17.11289562659939 0.5604042439455784 6 {I|L}{I|L}[PA] 4 -1 17.619 0.0 0.0 1.8955 0.0 0.0 517.2523342812532 0.0 517.2523342812532 0.0 9.291746928241126 0.0 0.0 0 0.3807196863200844 0.0 0.0 0.0 {I|L}{I|L}[PA] 1.8955 - 65 + 1 2.017 44464.9 1.0 4130 6197 10328 SUDHL4_400M_050219_2,10329 SUDHL4_400M_050219_2,10329,SVLLVTNGGA False False SVIIWTGR 59.242565 932.534838855267 2252773.5 10328.0 ENST00000372059.6_1_X:109445739-109459771:-|nuORF 0.2735620439052582 1.0 False 8.0 True nuORF PXD020620_cell_line SUDHL4_400M_050219_2 10341 59.299 800.0 68061.0 25 0 14065.0 + -1 FMLFIIIIHT 10 36 632.3619301685219 1262.7093074038437 2 632.3617431521416 MULTI CID FTMS 0 0 0 10340 45067.40625 0.4508086711516517 1 -0.0329055786132812 1 Oxidation (M) _FM(Oxidation (M))LFIIIIHT_ REV__ENSG00000184394|ENST00000641086|OR4N5 1.6526216038709556 0.7189921496796233 6 Q 1 -1 5.4846 0.0 0.0 0.43435 0.0 0.0 612.3827826009125 519.2536715143186 1131.6364541152311 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 Q 0.43435 - 6 + 1 2.017 48214.1 0.7599999904632568 4131 6208 10340 SUDHL4_400M_050219_2,10341 SUDHL4_400M_050219_2,10341,FMLFIIIIHT False False False False reverse PXD020620_cell_line SUDHL4_400M_050219_2 10342 59.31 604.0 65019.0 25 0 16794.0 -1 0 52 941.5605588035228 1881.1065646738457 2 941.5599853396416 MULTI CID FTMS 0 0 0 10340 107226.2421875 1.0 0 0.0 2 6 V 1 -1 2.4743 0.0 0.0 0.13153 0.0 0.0 1370.7895308377113 408.2269075983032 1779.0164384360144 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 V 0.13153 - 16 + 1 2.017 32997.4 1.0 4132 6208 10340 SUDHL4_400M_050219_2,10342 SUDHL4_400M_050219_2,10342, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10343 59.316 326.0 181630.0 25 0 34142.0 -1 VRPGAQLR 8 45 938.5514470206724 937.5441705540724 1 938.5529662966728 MULTI CID FTMS 0 0 0 10340 98022.828125 0.8189996301521676 -1 0.0038871765136718 3 Acetyl (Protein N-term) _(Acetyl (Protein N-term))VRPGAQLR_ ENST00000592416.1_1_18:48722932-48722989:-|nuORF 2.302733041254933 0.8103549651115762 6 Q[R{I|L}] 3 -1 4.437 0.0 0.0 0.47326 0.0 0.0 522.2875233380875 0.0 522.2875233380875 0.0 4.436974992327125 0.0 0.0 0 0.0 0.0 0.0 0.0 Q[R{I|L}] 0.47326 + + 4 1 2.017 45164.8 1.0 4133 6208 10340 SUDHL4_400M_050219_2,10343 SUDHL4_400M_050219_2,10343,VRPGAQLR False False False False nuORF PXD020620_cell_line SUDHL4_400M_050219_2 10352 59.36 800.0 123060.0 25 0 31702.0 + -1 SVIIPGMTL 9 87 946.5294512869674 0 946.5297119021416 PEAK CID FTMS 0 0 0 10351 107727.859375 0.867900347181136 1 -0.0302543640136718 1 nc|ENSG00000078246|O75386-2|TULP3;ENSG00000078246|ENST00000448120|TULP3 6 {I|L}{I|L} 2 -1 8.5835 0.0 0.0 0.4539 0.0 0.0 1478.7744044276471 183.077936040686 1661.852340468333 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {I|L}{I|L} 0.4539 - 208 + 1 2.017 69966.4 0.4000000059604645 4134 6216 10351 SUDHL4_400M_050219_2,10352 SUDHL4_400M_050219_2,10352, False False SVIIPGMTL 59.360223 946.529711902142 790634.0 10351.0 nc|ENSG00000078246|O75386-2|TULP3;;ENSG00000078246|ENST00000448120|TULP3 4.067240079243978 1.0 False 9.0 True self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10353 59.374 800.0 130520.0 25 0 25080.0 + 40965 VLWPESISV 9 85 1029.5627393967773 1028.555462930177 1 1029.560107409954 MULTI CID FTMS 0 0 0 10351 96751.75 0.3172715793546837 -22 0.1220054626464843 2 Unmodified _VLWPESISV_ ENSG00000077238|ENST00000395762|IL4R;nc|ENSG00000077238|P24394-3|IL4R 92.8221339359638 0.0138398038803217 6 S{I|L}SVV{I|L}SV 8 5 74.678 0.0 0.0 7.2605 0.0 0.0 226.09561354804845 0.0 226.09561354804845 0.0 47.95207460350632 0.0 0.0 0 0.3494850021680094 0.0 2.809894379144197 0.0 S{I|L}SVV{I|L}SV 7.2605 - 1522 1 2.017 71755.6 0.3700000047683716 4135 6216 10351 SUDHL4_400M_050219_2,10353 SUDHL4_400M_050219_2,10353,VLWPESISV True True False False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10362 59.419 800.0 103780.0 25 0 18669.0 + 25703 NIFPYPVGV 9 57 1005.5400497412178 1004.5327732746176 1 1005.539599597454 MULTI CID FTMS 0 0 0 10361 104072.09375 0.5132635179491203 28 -0.1794700622558593 1 Unmodified _NIFPYPVGV_ ENSG00000139218|ENST00000369367|SCAF11;nc|ENSG00000139218|Q99590-2|SCAF11 97.07464715276576 0.0121042244793311 6 {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PYPVGV 9 0 + 91.983 0.0 0.0 9.1568 9.1568 97.916 0.0 0.0 0.0 23.745776384474013 16.478174818886373 16.478174818886373 23.745776384474013 0 2.288725489996436 1.3010299956639813 0.0 1.0501648626366045 + + {[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}PYPVGV;[VP]{M(Oxidation (M))|F}QYPVGV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[QT]QVGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}PV{M(Oxidation (M))|F}QVGV;{[QV]|[N{I|L}]|[RA]|[KV]}[QT]{M(Oxidation (M))|F}QVGV;{[QV]|[N{I|L}]|[RA]|[KV]}{[SA]|[TG]}A{M(Oxidation (M))|F}QVGV;[VP][YQ]{M(Oxidation (M))|F}PVGV;{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}{M(Oxidation (M))|F}{[QV]|[N{I|L}]|[RA]|[KV]}PVGV;[VP]{M(Oxidation (M))|F}{I|L}{M(Oxidation (M))|F}QVGV;{[QV]|[N{I|L}]|[RA]|[KV]}{M(Oxidation (M))|F}[QT][AG]VGV 9.1568;6.7929;6.3069;6.1209;5.7298;5.6843;5.5721;5.5144;5.51;5.3902 +;-;-;-;-;-;-;-;-;- + 628 1 2.017 63722.0 0.4399999976158142 4136 6224 10361 SUDHL4_400M_050219_2,10362 SUDHL4_400M_050219_2,10362,NIFPYPVGV True True NIFPYPVGV 59.418768 1005.53959959745 10558971.0 10361.0 ENSG00000139218|ENST00000369367|SCAF11;;nc|ENSG00000139218|Q99590-2|SCAF11 8.178587754567465 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10366 59.432 160.0 630590.0 25 0 146910.0 27032 PEPPPLIAP 9 58 930.5282402893316 929.5209638227316 1 930.5323364138604 MULTI CID FTMS 0 0 0 10365 308724.71875 0.3856199672570908 23 -0.1389579772949218 1 Unmodified _PEPPPLIAP_ ENSG00000108509|ENST00000348066|CAMTA2;ENST00000574951.5_1_17:4872053-4885503:-|nuORF;nc|ENSG00000108509|O94983-2|CAMTA2;nc|ENSG00000108509|O94983-3|CAMTA2;nc|ENSG00000108509|O94983-4|CAMTA2;nc|ENSG00000108509|O94983-6|CAMTA2 40.44857923139169 0.0729940656229577 6 [VS]{I|L}{I|L}PPP[HA] 9 7 + 54.402 0.0 0.0 5.8527 5.8527 79.342 0.0 0.0 0.0 11.54901959985743 1.4608280609188284 1.4608280609188284 1.4608280609188284 0 1.0 1.154901959985743 0.0 0.0 [VS]{I|L}{I|L}PPP[HA];[VS]{I|L}{I|L}PGMT{I|L};[VS]{I|L}P{I|L}PP[HA];[VS]{I|L}PCVVT{I|L};[VS]{I|L}P{I|L}GMT{I|L};[VS]{I|L}{[MS]|[{M(Oxidation (M))|F}A]}{I|L}[PA]{I|L};[VS]{I|L}P{[MG]|[TS]}{I|L}T{I|L};[VS]{I|L}{I|L}[YK][HA];[VS]{I|L}{I|L}{[MS]|[{M(Oxidation (M))|F}A]}[PA]{I|L};[VS]{[CP]|[EA]}{I|L}VVT{I|L} 5.8527;5.6956;4.8867;4.7494;4.7295;4.5978;4.1347;4.1101;3.9453;3.6797 -;-;-;-;-;-;-;-;-;- 208 1 2.017 69870.5 1.0 4137 6227 10365 SUDHL4_400M_050219_2,10366 SUDHL4_400M_050219_2,10366,PEPPPLIAP True False LLPPPIAPL 59.432441 930.53233641386 6894274.0 10365.0 ENSG00000136378|ENST00000388820|ADAMTS7 0.572572390238444 1.0 False 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10370 59.458 800.0 48205.0 25 0 2860.6 + 9357 FINDSIVYL 9 70 1083.5720310127142 1082.5647545461145 1 1083.573046863079 MULTI CID FTMS 0 0 0 10369 61385.8515625 0.6412310144585253 15 -0.0864105224609375 1 Unmodified _FINDSIVYL_ ENSG00000177398|ENST00000408910|UMODL1;ENST00000400423.6_1_21:43540943-43557727:+|nuORF;nc|ENSG00000177398|Q5DID0-2|UMODL1;nc|ENSG00000177398|Q5DID0-3|UMODL1;nc|ENSG00000177398|Q5DID0-4|UMODL1 49.93300154707207 0.0405168250806675 6 {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NDS{I|L}V[Y{I|L}] 9 0 + 46.99 0.0 0.0 4.3406 4.3406 78.162 0.0 0.0 0.0 4.762036441594191 24.22406083301552 4.762036441594191 4.638494991635177 0 0.2887254899964357 0.0 1.274227503252014 0.4247425010840047 + + {[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NDS{I|L}V[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}NDSV{I|L}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DN]{I|L}V[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGDS{I|L}V[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}S[DN]V{I|L}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}GGDSV{I|L}[Y{I|L}];{[ME]|[YP]|[{M(Oxidation (M))|F}{I|L}]}[HM]{M(Oxidation (M))|F}{I|L}[Y{I|L}] 4.3406;3.9121;3.2754;3.0977;2.8469;2.4025;0.89787 +;-;-;-;-;-;- + 494 1 2.017 34212.3 0.3700000047683716 4138 6230 10369 SUDHL4_400M_050219_2,10370 SUDHL4_400M_050219_2,10370,FINDSIVYL True True FINDSIVYL 59.458299 1083.57304686308 540573.0 10369.0 ENST00000400423.6_1_21:43540943-43557727:+|nuORF;;nc|ENSG00000177398|Q5DID0-2|UMODL1;;ENSG00000177398|ENST00000408910|UMODL1;;nc|ENSG00000177398|Q5DID0-3|UMODL1;;nc|ENSG00000177398|Q5DID0-4|UMODL1 2.750447412331899 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10382 59.515 800.0 20483.0 25 0 1336.8 -1 0 36 1188.552077669876 3562.634403609828 3 1189.208911120892 MULTI CID FTMS 0 0 0 -1 0 1 6 {M(Oxidation (M))|F}A 2 -1 7.9588 0.0 0.0 0.2234 0.0 0.0 2323.114336326428 1018.3920382135374 3341.506374539965 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 {M(Oxidation (M))|F}A 0.2234 - 11 + 1 2.017 21512.7 0.3400000035762787 4139 6241 10381 SUDHL4_400M_050219_2,10382 SUDHL4_400M_050219_2,10382, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10387 59.537 434.0 74864.0 25 0 5259.5 -1 0 62 945.5244922325764 0 945.5273315310478 PEAK CID FTMS 0 0 0 10386 51310.546875 0.6565728412221877 5 -0.0387077331542968 1 6 S{I|L}{I|L}S 4 -1 36.23 0.0 0.0 1.9179 0.0 0.0 1189.6560878813652 296.12619959049067 1485.782287471856 0.0 0.0 0.0 0.0 0 0.0 0.0 1.7302046884880935 0.0 S{I|L}{I|L}S 1.9179 - 86 + 1 2.017 28729.1 1.0 4140 6245 10386 SUDHL4_400M_050219_2,10387 SUDHL4_400M_050219_2,10387, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10390 59.558 800.0 14927.0 25 0 1030.9 -1 0 32 1174.353686511517 0 1174.353686511517 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 20045.8 0.4000000059604645 4141 6247 10389 SUDHL4_400M_050219_2,10390 SUDHL4_400M_050219_2,10390, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10394 59.578 553.0 209990.0 25 0 12600.0 + 1574 ALLEGLTVV 9 117 914.5568558417218 913.5495793751218 1 914.5574218630792 MULTI CID FTMS 0 0 0 10393 106419.0 0.6133835605162323 1 -0.0122642517089843 1 Unmodified _ALLEGLTVV_ ENSG00000111481|ENST00000262061|COPZ1;ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-3|COPZ1;nc|ENSG00000111481|P61923-4|COPZ1;nc|ENSG00000111481|P61923-5|COPZ1 64.23631603340823 0.0237365939569086 6 {[QN]|[E{I|L}]|[KN]}G{I|L}A{I|L}TVV 9 4 + 75.606 0.0 0.0 8.276 8.276 86.413 0.0 0.0 0.0 5.726825097560422 14.973024840566469 5.726825097560422 2.631492287727454 0 0.2134679910804404 1.0969100130080565 1.566901560044258 0.0 {[QN]|[E{I|L}]|[KN]}G{I|L}A{I|L}TVV;{[QN]|[E{I|L}]|[KN]}G{I|L}A{I|L}S{I|L}V;[{I|L}A]{I|L}DA{I|L}TVV;{[QN]|[E{I|L}]|[KN]}G{I|L}AT{I|L}VV;{[QN]|[E{I|L}]|[KN]}GA{I|L}{I|L}TVV;[{I|L}A]{I|L}DA{I|L}S{I|L}V;{[QN]|[E{I|L}]|[KN]}G{I|L}ATV{I|L}V;{[QN]|[E{I|L}]|[KN]}GA{I|L}{I|L}S{I|L}V;{[QN]|[E{I|L}]|[KN]}Q{I|L}{I|L}TVV;[{I|L}A]{I|L}EG{I|L}TVV 8.276;7.988;7.6491;7.6415;7.6218;7.3611;7.3534;7.3338;7.2422;7.1269 -;-;-;-;-;-;-;-;-;+ + 3823 1 2.017 78160.4 1.0 4142 6250 10393 SUDHL4_400M_050219_2,10394 SUDHL4_400M_050219_2,10394,ALLEGLTVV True True ALLEGLTVV 59.577946 914.557421863079 828879.0 10393.0 nc|ENSG00000111481|P61923-4|COPZ1;;ENST00000551412.5_1_12:54718935-54741629:+|nuORF;;ENSG00000111481|ENST00000262061|COPZ1;;nc|ENSG00000111481|P61923-3|COPZ1;;nc|ENSG00000111481|P61923-5|COPZ1 4.084140618642171 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10400 59.61 800.0 9101.2 25 0 1327.3 -1 0 19 1197.484057605267 0 1197.484057605267 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 15550.5 0.3600000143051147 4143 6255 10399 SUDHL4_400M_050219_2,10400 SUDHL4_400M_050219_2,10400, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10404 59.634 723.0 106350.0 25 0 20920.0 + 40966 VLWPESISV 9 82 1029.5627393967773 1028.555462930177 1 1029.563037097454 MULTI CID FTMS 0 0 0 10403 115047.109375 0.3772663346306117 20 -0.1408271789550781 1 Unmodified _VLWPESISV_ ENSG00000077238|ENST00000395762|IL4R;nc|ENSG00000077238|P24394-3|IL4R 71.13359017698441 0.0206607516130725 6 S{I|L}SVV{I|L}SV 8 5 69.494 0.0 0.0 6.7565 0.0 0.0 226.0959339826188 0.0 226.0959339826188 0.0 43.36605646626243 0.0 0.0 0 0.3494850021680094 0.0 2.416386562212267 0.0 S{I|L}SVV{I|L}SV 6.7565 - 1152 1 2.017 57935.8 1.0 4144 6258 10403 SUDHL4_400M_050219_2,10404 SUDHL4_400M_050219_2,10404,VLWPESISV True True VLWPESISV 59.633681 1029.56303709745 3447784.5 10403.0 ENSG00000077238|ENST00000395762|IL4R;;nc|ENSG00000077238|P24394-3|IL4R 6.337575912475586 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10413 59.678 781.0 67416.0 25 0 4624.7 + 33726 SLADFMQEV 9 83 1039.47808087036 1038.4708044037602 1 1039.479296863079 MULTI CID FTMS 0 0 0 10412 96731.0703125 0.8703655160958098 -4 0.0160789489746093 1 Unmodified _SLADFMQEV_ ENSG00000125107|ENST00000317147|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-4|CNOT1 96.11092074494114 0.0124975504059861 6 {[TV]|[{I|L}S]}{[DA]|[EG]}{M(Oxidation (M))|F}MQEV 9 0 + 73.583 0.0 0.0 7.0857 7.0857 86.937 0.0 0.0 0.0 16.278544140069755 9.018637558036673 9.018637558036673 4.9595372608497 0 1.0387254899964358 1.154901959985743 2.055462187404089 0.0 + + {[TV]|[{I|L}S]}{[DA]|[EG]}{M(Oxidation (M))|F}MQEV;{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]MQEV;{[TV]|[{I|L}S]}{[DA]|[EG]}{M(Oxidation (M))|F}MQVE;{[TV]|[{I|L}S]}{[DA]|[EG]}{M(Oxidation (M))|F}M[AG]EV;{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]MQVE;{[TV]|[{I|L}S]}[W{M(Oxidation (M))|F}]M[AG]EV;{[C(Carbamidomethyl (C))V]|[MQ]|[RC]|[MK]}EY{I|L}QEV;{[C(Carbamidomethyl (C))P]|[EQ]|[WA]|[EK]|[RT]}[Y{I|L}]MQEV;{[{M(Oxidation (M))|F}D]|MM}A{[TV]|[{I|L}S]}MQEV;{[TV]|[{I|L}S]}{[DA]|[EG]}{M(Oxidation (M))|F}M[AG]VE 7.0857;6.6082;6.2173;6.199;5.7397;5.7163;5.5182;5.496;5.3705;5.3306 +;-;-;-;-;-;-;-;-;- + 1256 1 2.017 39272.9 1.0 4145 6266 10412 SUDHL4_400M_050219_2,10413 SUDHL4_400M_050219_2,10413,SLADFMQEV True True SLADFMQEV 59.67786 1039.47929686308 533380.875 10412.0 nc|ENSG00000125107|A5YKK6-3|CNOT1;;nc|ENSG00000125107|A5YKK6-4|CNOT1;;ENSG00000125107|ENST00000317147|CNOT1;;nc|ENSG00000125107|A5YKK6-2|CNOT1 3.925159295399984 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10416 59.698 800.0 56846.0 25 0 5329.8 -1 0 77 1038.920458972454 0 1038.920458972454 PEAK CID FTMS 0 0 0 -1 0 1 6 EQ{I|L}YE 5 -1 23.448 0.0 0.0 1.1296 0.0 0.0 1154.435875365027 256.07636438541255 1410.5122397504394 0.0 0.0 0.0 0.0 0 0.0 0.0 1.2302046884880935 0.0 EQ{I|L}YE 1.1296 - 166 + 1 2.017 38096.4 0.949999988079071 4146 6268 10415 SUDHL4_400M_050219_2,10416 SUDHL4_400M_050219_2,10416, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10421 59.727 800.0 35607.0 25 0 842.81 -1 0 66 890.3777343630791 0 890.3777343630791 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 27286.8 0.2899999916553497 4147 6272 10420 SUDHL4_400M_050219_2,10421 SUDHL4_400M_050219_2,10421, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10424 59.747 800.0 10954.0 25 0 878.32 -1 0 26 1102.465014636517 0 1102.465014636517 PEAK CID FTMS 0 0 0 -1 0 1 6 -1 -1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 0.0 0.0 0.0 0.0 0 - 0 1 2.017 17799.2 0.3700000047683716 4148 6274 10423 SUDHL4_400M_050219_2,10424 SUDHL4_400M_050219_2,10424, False False False False unknown PXD020620_cell_line SUDHL4_400M_050219_2 10436 59.804 800.0 102060.0 25 0 17067.0 + 33889 SLFPGQVVI 9 71 959.5562228598072 958.5489463932072 1 959.5540649294852 MULTI CID FTMS 0 0 0 10435 114347.6875 0.3923719682561741 39 -0.1839523315429687 1 Unmodified _SLFPGQVVI_ ENSG00000014138|ENST00000265465|POLA2;ENST00000527850.5_1_11:65029833-65063521:+|nuORF;nc|ENSG00000014138|Q14181-2|POLA2 56.17704186161178 0.0281986971544335 6 {M(Oxidation (M))|F}V{M(Oxidation (M))|F}TVV{I|L} 7 5 55.878 0.0 0.0 5.8294 0.0 0.0 135.06862075019689 0.0 135.06862075019689 0.0 38.16261070661504 0.0 0.0 0 0.0 0.0 1.1421590589602533 0.0 {M(Oxidation (M))|F}V{M(Oxidation (M))|F}TVV{I|L} 5.8294 - 615 1 2.017 59828.9 0.3700000047683716 4149 6285 10435 SUDHL4_400M_050219_2,10436 SUDHL4_400M_050219_2,10436,SLFPGQVVI True True SLFPGQVVI 59.803899 959.554064929485 2448214.5 10435.0 ENST00000527850.5_1_11:65029833-65063521:+|nuORF;;ENSG00000014138|ENST00000265465|POLA2;;nc|ENSG00000014138|Q14181-2|POLA2 3.8281129201253257 1.0 True 9.0 False self_gene PXD020620_cell_line SUDHL4_400M_050219_2 10452 59.877 800.0 106470.0 25 0 10517.0 + 40603 VLADQVWTL 9 83 1044.5728673816302 1043.5655909150305 1 1044.577441394329 MULTI CID FTMS 0 0 0 10451 126704.7578125 0.7017749077120339 -1 0.0040626525878906 1 Unmodified _VLADQVWTL_ ENSG00000114026|ENST00000344629|OGG1;nc|ENSG00000114026|O15527-2|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-8|OGG1 88.95385435242217 0.0153473310052057 6 {[QD]|[EN]|[WG]|[KD]|[RS]}AV{I|L}VWT{I|L} 9 4 + 86.348 0.0 0.0 8.2743 8.2743 83.076 0.0 0.0 0.0 5.167118777434752 16.478174818886373 5.167118777434752 0.3959062302381255 0 0.3807196863200844 0.0 1.360924374808178 1.1307196863200843 {[QD]|[EN]|[WG]|[KD]|[RS]}AV{I|L}VWT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VA{I|L}VWT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AV{I|L}VTGE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VA{I|L}VTGE{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DA{I|L}VWT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}A{I|L}VVWT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AVV{I|L}WT{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}AV{I|L}V{[DA]|[EG]}T{I|L};{[QV]|[N{I|L}]|[RA]|[KV]}DA{I|L}VTGE{I|L};{[QD]|[EN]|[WG]|[KD]|[RS]}VAV{I|L}WT{I|L} 8.2743;8.2364;7.8649;7.8269;7.7792;7.6974;7.3941;7.392;7.3697;7.3562 -;-;-;-;-;-;-;-;-;- 4706 1 2.017 63083.0 0.949999988079071 4150 6300 10451 SUDHL4_400M_050219_2,10452 SUDHL4_400M_050219_2,10452,VLADQVWTL True True VLADQVWTL 59.876678 1044.57744139433 351063.59375 10451.0 nc|ENSG00000114026|O15527-5|OGG1;;nc|ENSG00000114026|O15527-3|OGG1;;nc|ENSG00000114026|O15527-6|OGG1;;nc|ENSG00000114026|O15527-2|OGG1;;ENSG00000114026|ENST00000344629|OGG1;;nc|ENSG00000114026|O15527-4|OGG1;;nc|ENSG00000114026|O15527-7|OGG1;;nc|ENSG00000114026|O15527-8|OGG1 5.138880650202434 1.0 True 9.0 False self_gene